Raw file	Scan number	Retention time	Ion injection time	Total ion current	Collision energy	Summations	Base peak intensity	Elapsed time	Identified	Matched	Reverse	MS/MS IDs	Sequence	Length	Filtered peaks	m/z	Mass	Charge	MS2 m/z	Type	Fragmentation	Mass analyzer	Parent intensity fraction	Fraction of total spectrum	Base peak fraction	Precursor full scan number	Precursor intensity	Precursor apex fraction	Precursor apex offset	Precursor apex offset time	Scan event number	Modifications	Modified sequence	Proteins	Score	PEP	Experiment	MS3 scan numbers	Reporter PIF	Reporter fraction	Intens Comp Factor	CTCD Comp	RawOvFtT	AGC Fill	Scan index	MS scan index	MS scan number
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2538	13.048	NaN	650.55	30	0	94.226	0.143	+			21525	KNSGPKAAKK	10	34	514.81494140625	NaN	0	514.81494140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KNSGPKAAKK_	BMS1|p.L617Afs*20|1|0.26|ENSG00000165733|chr10:42797085-42797086|-/A|frameshift_variant;ENSG00000165733|ENST00000374518|BMS1;ENST00000399449.3_1_10:75487125-75488312:-|nuORF	23.52269567125451	0.42010282974921537	1				NaN	NaN	0	NaN	124	2412	2537
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2686	13.592	NaN	2218.1	30	0	666.74	0.142	+			33254	RGEKVEAK	8	40	458.7639712905775	915.513389647955	2	458.7644348144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RGEKVEAK_	ENST00000593011.5_1_1:152140679-152287408:+|nuORF	60.97194046774394	0.49215940876911696	1				NaN	NaN	0	NaN	182	2502	2685
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2715	13.697	NaN	6081.2	30	0	1254.5	0.143			+	20419	KETRKVEK	8	66	509.3058908457901	1016.5972287583802	2	509.30731201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KETRKVEK_	REV__ENST00000276440.11_1_8:25270087-25270417:+|nuORF	79.71258880314673	0.32596852995588826	1				NaN	NaN	0	NaN	193	2520	2714
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2750	13.802	NaN	2913.6	30	0	696.97	0.145			+	49035	VVHHVTDPVS	10	31	363.86219311249647	NaN	0	363.8624267578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVHHVTDPVS_	REV__ENSG00000079785|ENST00000233084|DDX1;REV__ENST00000459706.1_1_2:15757448-15761320:+|nuORF;REV__nc|ENSG00000079785|Q92499-2|DDX1;REV__nc|ENSG00000079785|Q92499-3|DDX1	36.446750945000026	0.3805027428805705	1				NaN	NaN	0	NaN	213	2535	2749
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2768	13.849	NaN	2198.9	30	0	507.17	0.141			+	30088	PQRKGGPPG	9	39	447.25117398858134	892.4877950439627	2	447.2519226074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PQRKGGPPG_	REV__COL22A1|p.G1411R|1|0.36|ENSG00000169436|chr8:138598853-138598853|C/G|missense_variant	33.51558372728122	0.4900267029546261	1				NaN	NaN	0	NaN	225	2541	2767
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2785	13.894	NaN	1711.2	30	0	325.35	0.142			+	20340	KERNSPKP	8	53	478.269316952167	954.524080971134	2	478.26995849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KERNSPKP_	REV__ADAMTS9|p.C1222Lfs*15|1|0.3|ENSG00000163638|chr3:64604004-64604004|C/-|frameshift_variant;REV__ADAMTS9|p.S1884Ffs*2|1|0.35|ENSG00000163638|chr3:64533233-64533233|G/-|frameshift_variant;REV__ENSG00000163638|ENST00000498707|ADAMTS9;REV__ENST00000475557.5_1_3:64600969-64673333:-|nuORF;REV__ENST00000482490.5_1_3:64536549-64672246:-|nuORF;REV__nc|ENSG00000163638|Q9P2N4-1|ADAMTS9;REV__nc|ENSG00000163638|Q9P2N4-2|ADAMTS9;REV__nc|ENSG00000163638|Q9P2N4-4|ADAMTS9	52.936696900407355	0.5717071646657654	1				NaN	NaN	0	NaN	236	2547	2784
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2838	14.054	NaN	1558.3	30	0	202.43	0.142	+			40249	STSHVSVSK	9	44	466.24586710922966	NaN	0	466.246337890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STSHVSVSK_	ENSG00000215182|ENST00000621226|MUC5AC;ENSG00000215182|ENST00000621226|MUC5AC;MUC5AC|p.R4729Efs*5|1|0.24|ENSG00000215182|chr11:1192325-1192325|C/-|frameshift_variant;MUC5AC|p.R4729Efs*5|1|0.24|ENSG00000215182|chr11:1192325-1192325|C/-|frameshift_variant	101.25262130126117	0.018912469721856617	1				NaN	NaN	0	NaN	265	2571	2837
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2876	14.162	NaN	756.81	30	0	99.392	0.141			+	13397	GLEGSSRAP	9	29	437.22509157942864	NaN	0	437.2254333496094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GLEGSSRAP_	REV__ENST00000515213.1_1_7:420976-421372:+|nuORF	29.14955571784316	0.3303970763161698	1				NaN	NaN	0	NaN	288	2586	2875
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3014	14.557	NaN	2109.6	30	0	383.68	0.143				-1	 	0	45	501.2844079639801	500.2771314973801	1	501.28515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	372	2640	3013
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3065	14.684	NaN	1691.6	30	0	386.6	0.142	+			4399	ATHVGSVEK	9	41	464.2482162771424	NaN	0	464.24835205078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATHVGSVEK_	ENSG00000080986|ENST00000261597|NDC80	67.49366992349736	0.1173583512313808	1				NaN	NaN	0	NaN	408	2655	3064
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3118	14.822	NaN	1576.9	30	0	304.27	0.141	+			6244	AVSEKKAK	8	37	430.76332747149746	859.512102009795	2	430.763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVSEKKAK_	ENSG00000158887|ENST00000533357|MPZ;ENST00000476410.1_1_1:161275668-161275791:-|nuORF;nc|ENSG00000158887|P25189-2|MPZ	53.351449002276354	0.5676011784961348	1				NaN	NaN	0	NaN	443	2673	3117
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3176	14.981	NaN	8944.8	30	0	2048.1	0.214				-1	QMAAFHPS	8	58	452.7039276168939	903.3933023005878	2	452.7044677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_QM(Oxidation (M))AAFHPS_	ARHGAP25|p.P365Lfs*17|1|0.24|ENSG00000163219|chr2:68819209-68819209|C/-|frameshift_variant;ARHGAP25|p.Q456Rfs*110|1|0.34|ENSG00000163219|chr2:68822501-68822501|T/-|frameshift_variant;ENSG00000163219|ENST00000409202|ARHGAP25;nc|ENSG00000163219|P42331-2|ARHGAP25;nc|ENSG00000163219|P42331-3|ARHGAP25;nc|ENSG00000163219|P42331-5|ARHGAP25;nc|ENSG00000163219|P42331-6|ARHGAP25;nc|ENSG00000163219|P42331|ARHGAP25	50.0245360154114	0.5941082100236891	1				NaN	NaN	0	NaN	480	2694	3175
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3177	14.985	NaN	1352.7	30	0	712.72	0.036				-1	AVQINPKCF	9	19	359.5220642089844	NaN	0	359.5220642089844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_AVQINPKC(Carbamidomethyl (C))F_	ENSG00000171121|ENST00000392685|KCNMB3;nc|ENSG00000171121|Q9NPA1-2|KCNMB3;nc|ENSG00000171121|Q9NPA1-4|KCNMB3;nc|ENSG00000171121|Q9NPA1|KCNMB3	26.69291269510374	0.34280015626154364	1				NaN	NaN	0	NaN	481	2694	3175
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3246	15.167	NaN	2287.3	30	0	584.01	0.214			+	17112	HSISPQQI	8	44	455.24295420196927	908.4713554707386	2	455.24310302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HSISPQQI_	REV__ENSG00000122779|ENST00000343526|TRIM24;REV__ENST00000493595.1_1_7:138239597-138241097:+|nuORF;REV__TRIM24|p.R1009Kfs*10|1|0.49|ENSG00000122779|chr7:138584817-138584818|-/A|frameshift_variant	25.57405402267927	0.7618694492699909	1				NaN	NaN	0	NaN	526	2718	3245
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3247	15.171	NaN	2479.5	30	0	421.96	0.043				-1	MRFCRPRVWSG	11	44	503.9126941849395	NaN	0	503.5783386230469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term),Carbamidomethyl (C),Oxidation (M)	_(Acetyl (Protein N-term))M(Oxidation (M))RFC(Carbamidomethyl (C))RPRVWSG_	ENST00000560995.5_1_15:73977148-73977205:+|nuORF	6.659615375131196	0.456735970842152	1				NaN	NaN	0	NaN	527	2718	3245
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3263	15.203	NaN	625.97	30	0	75.419	0.15			+	28503	NHLFFFFLQQE	11	30	490.57952880859375	NaN	0	490.57952880859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NHLFFFFLQQE_	REV__ENST00000261254.7_1_12:4410574-4410667:+|nuORF	11.454612760654994	0.456735970842152	1				NaN	NaN	0	NaN	540	2721	3262
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3296	15.276	NaN	1591.4	30	0	496.99	0.142			+	34741	RWTSHTPS	8	41	486.24029797798084	NaN	0	486.2398681640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RWTSHTPS_	REV__nc|ENSG00000063322|Q9NX70-2|MED29	30.503639358989545	1.7418937515398478	1				NaN	NaN	0	NaN	567	2727	3295
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3310	15.307	NaN	2610.2	30	0	596.31	0.141	+			14405	GTAPIETR	8	39	422.72948450295786	843.4444160727157	2	422.7293701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTAPIETR_	ENST00000383168.8_2_18:24434304-24434469:-|nuORF	71.29570347882199	0.39610197767395533	1				NaN	NaN	0	NaN	578	2730	3309
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3354	15.422	NaN	1630	30	0	297.19	0.141	+			11556	FPKLLACL	8	34	452.7688293457031	NaN	0	452.7688293457031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FPKLLACL_	ENSG00000175449|ENST00000380005|RFESD	37.028477286268924	1.7418937515398478	1				NaN	NaN	0	NaN	607	2745	3353
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3378	15.489	NaN	1597.6	30	0	740.88	0.142	+			17134	HSSGPMVEK	9	41	486.2346856223701	970.4548183115402	2	486.234619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HSSGPMVEK_	ENSG00000069509|ENST00000378045|FUNDC1;ENST00000483115.1_1_X:44383446-44401387:-|nuORF;FUNDC1|p.F37C|1|0.33|ENSG00000069509|chrX:44542020-44542020|A/C|missense_variant	70.8162118820467	0.13725933411854815	1				NaN	NaN	0	NaN	622	2754	3377
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3402	15.547	NaN	1621.1	30	0	290.3	0.142	+			33943	RSAPSGPVR	9	52	463.76238568005874	NaN	0	463.7622375488281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RSAPSGPVR_	ENSG00000147274|ENST00000320676|RBMX;nc|ENSG00000147274|P38159-2|RBMX	78.26377905018397	0.07733306720594871	1				NaN	NaN	0	NaN	640	2760	3401
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3413	15.573	NaN	4117.8	30	0	847.88	0.214	+			41746	SVSKNVNVK	9	58	487.7846593559515	973.554765778703	2	487.7853088378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSKNVNVK_	ENSG00000198589|ENST00000651943|LRBA;LRBA|p.L2590*|1|0.41|ENSG00000198589|chr4:150310342-150310342|A/-|frameshift_variant;LRBA|p.T2011Qfs*11|1|0.19|ENSG00000198589|chr4:150599022-150599022|T/-|frameshift_variant;nc|ENSG00000198589|P50851-2|LRBA;nc|ENSG00000198589|P50851|LRBA	88.17693792209575	0.07000514020414955	1				NaN	NaN	0	NaN	648	2763	3412
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3414	15.577	NaN	782.41	30	0	102.94	0.034			+	-1	LCQQKSGK	8	41	474.7499694824219	NaN	0	474.7499694824219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LC(Carbamidomethyl (C))QQKSGK_	REV__ENSG00000115816|ENST00000234170|CEBPZ	54.776311868738084	1.7418937515398478	1				NaN	NaN	0	NaN	649	2763	3412
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3448	15.665	NaN	7330.4	30	0	1404.4	0.143	+			13271	GITGARHRT	9	66	484.7734028689909	967.5322528047818	2	484.7741394042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GITGARHRT_	ENST00000486040.1_1_7:2278405-2281804:-|nuORF	71.29570347882199	0.13518600952103718	1				NaN	NaN	0	NaN	671	2775	3447
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3464	15.709	NaN	3711.7	30	0	656.46	0.142	+			6348	AVTRTTPVK	9	57	486.79482262459396	971.575092315988	2	486.7950134277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVTRTTPVK_	ENST00000395472.2_1_14:55494079-55509730:+|nuORF;ENST00000553735.1_1_14:55494079-55498700:+|nuORF;ENST00000555846.1_1_14:55494079-55498626:+|nuORF	65.46538089061403	0.16805504838372562	1				NaN	NaN	0	NaN	681	2781	3463
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3474	15.734	NaN	1279.5	30	0	436.1	0.143	+			39610	STHQAAIVSK	10	39	521.2890348983055	NaN	0	521.2880249023438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STHQAAIVSK_	ENSG00000122786|ENST00000361675|CALD1;ENST00000482470.5_1_7:134552484-134644871:+|nuORF;nc|ENSG00000122786|Q05682-2|CALD1;nc|ENSG00000122786|Q05682-3|CALD1;nc|ENSG00000122786|Q05682-4|CALD1;nc|ENSG00000122786|Q05682-5|CALD1;nc|ENSG00000122786|Q05682-6|CALD1	42.33807565288922	0.3540422799631949	1				NaN	NaN	0	NaN	688	2784	3473
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3484	15.758	NaN	5832.9	30	0	1452.4	0.141	+			27851	MTGSSAPCK	9	57	441.19610035079717	880.3776477683944	2	441.19671630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MTGSSAPCK_	ENST00000392001.6_1_2:238499129-238499162:-|nuORF	104.0567914643314	0.03506238181059741	1				NaN	NaN	0	NaN	695	2787	3483
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3529	15.878	NaN	3037.8	30	0	1027	0.145	+			15296	GTVDKKMVEK	10	47	378.87699019308263	1133.609141179448	3	378.8774719238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTVDKKMVEK_	CBL|p.L272*|1|0.25|ENSG00000110395|chr11:119274894-119274894|T/-|frameshift_variant;CBL|p.V581Cfs*4|1|0.08|ENSG00000110395|chr11:119285359-119285360|-/C|frameshift_variant;ENSG00000110395|ENST00000264033|CBL	67.49366992349736	0.29779660154124327	1				NaN	NaN	0	NaN	725	2802	3528
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3571	16.002	NaN	26042	30	0	10062	0.141				-1	 	0	54	418.22884697871405	834.4431410242281	2	418.2293701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	749	2820	3570
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3588	16.039	NaN	4182.3	30	0	540.56	0.143			+	12222	GARSGSVPRE	10	61	508.26693468879085	1014.5193164443817	2	508.2678527832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GARSGSVPRE_	REV__ENST00000569930.1_1_16:2133412-2138608:+|nuORF	47.657333605630114	0.47858658696240314	1				NaN	NaN	0	NaN	763	2823	3587
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3621	16.127	NaN	4959.7	30	0	481.69	0.145	+			20545	KFLQTFLSQ	9	57	371.2122172623127	NaN	0	371.21209716796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KFLQTFLSQ_	ENSG00000103599|ENST00000335894|IQCH;nc|ENSG00000103599|Q86VS3-2|IQCH;nc|ENSG00000103599|Q86VS3-4|IQCH	58.22992032128504	0.15686832049467786	1				NaN	NaN	0	NaN	784	2835	3620
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3634	16.156	NaN	4716.4	30	0	2038	0.148			+	51026	YKLFKETDEK	10	38	434.2323027332175	1299.6750787998526	3	434.23284912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YKLFKETDEK_	REV__tr|U7STC4|U7STC4_FUSNUPhosphoribosylformylglycinamidinesynthaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01008PE=4SV=1	42.33807565288922	0.5276008846745733	1				NaN	NaN	0	NaN	794	2838	3633
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3643	16.178	NaN	1473.3	30	0	292.02	0.143			+	16603	HGKSKEYK	8	39	488.7637176403235	975.512882347447	2	488.76470947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HGKSKEYK_	REV__ENSG00000183091|ENST00000397345|NEB;REV__nc|ENSG00000183091|P20929-1|NEB;REV__nc|ENSG00000183091|P20929-3|NEB;REV__nc|ENSG00000183091|P20929-4|NEB	47.657333605630114	0.6087971902037268	1				NaN	NaN	0	NaN	800	2841	3642
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3671	16.268	NaN	9803.2	30	0	2040.6	0.145				-1	 	0	68	377.22685167481814	1128.6587256246544	3	377.2279968261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	813	2856	3670
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3681	16.291	NaN	2519.9	30	0	1314.1	0.144			+	-1	PFFPVAFSM	9	41	550.7601144064356	NaN	0	550.7600708007812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))PFFPVAFSM(Oxidation (M))_	REV__AMBN|p.L21P|1|0.11|ENSG00000178522|chr4:70593373-70593373|T/C|missense_variant;REV__AMBN|p.P111Hfs*6|1|0.41|ENSG00000178522|chr4:70601453-70601453|C/-|frameshift_variant;REV__ENSG00000178522|ENST00000322937|AMBN;REV__nc|ENSG00000178522|Q9NP70-2|AMBN	31.954861631926434	0.3162336699109506	1				NaN	NaN	0	NaN	820	2859	3680
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3693	16.319	NaN	2767.5	30	0	293.71	0.142			+	30518	QAGTALRVAS	10	52	487.2743478921739	972.5341428511479	2	487.2742004394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QAGTALRVAS_	REV__COL9A3|p.P216Lfs*317|1|0.19|ENSG00000092758|chr20:62825828-62825828|C/-|frameshift_variant;REV__COL9A3|p.P243Lfs*290|1|0.43|ENSG00000092758|chr20:62826243-62826243|C/-|frameshift_variant	71.87747018426188	0.26198133118427214	1				NaN	NaN	0	NaN	829	2862	3692
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3767	16.503	NaN	1242.7	30	0	262.85	0.142	+			33567	RLGSVEAPK	9	40	478.7795585510127	955.5445641688254	2	478.7801818847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RLGSVEAPK_	ENSG00000111641|ENST00000322166|NOP2;nc|ENSG00000111641|P46087-2|NOP2;nc|ENSG00000111641|P46087-3|NOP2;nc|ENSG00000111641|P46087-4|NOP2	79.71258880314673	0.09879134589249085	1				NaN	NaN	0	NaN	882	2883	3766
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3847	16.689	NaN	2624.8	30	0	403.65	0.141	+			22723	KVAVATPAK	9	44	442.7817382123674	883.5489234915348	2	442.78167724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVAVATPAK_	ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232323706-232327997:-|nuORF	117.81106730687013	0.02252488733980868	1				NaN	NaN	0	NaN	944	2901	3846
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3860	16.719	NaN	2156.1	30	0	264.13	0.142	+			32378	QVANKNVAK	9	52	486.2848449620052	970.5551369908104	2	486.2855529785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QVANKNVAK_	ENSG00000143514|ENST00000343537|TP53BP2;nc|ENSG00000143514|Q13625-2|TP53BP2;nc|ENSG00000143514|Q13625|TP53BP2;TP53BP2|p.V504A|1|0.34|ENSG00000143514|chr1:223798652-223798652|A/G|missense_variant	79.45101966838831	0.09992237243120712	1				NaN	NaN	0	NaN	954	2904	3859
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3874	16.75	NaN	4003.1	30	0	1165.8	0.142	+			22364	KTIDASVSK	9	52	474.77146133425344	947.5283697353069	2	474.7719421386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTIDASVSK_	ENSG00000171681|ENST00000261168|ATF7IP;ENST00000535179.1_1_12:14619386-14628955:+|nuORF;ENST00000537653.5_1_12:14576849-14628955:+|nuORF;nc|ENSG00000171681|Q6VMQ6-2|ATF7IP;nc|ENSG00000171681|Q6VMQ6-4|ATF7IP;nc|ENSG00000171681|Q6VMQ6-5|ATF7IP	93.5975768576971	0.05472259948179787	1				NaN	NaN	0	NaN	965	2907	3873
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3886	16.777	NaN	654.17	30	0	246.26	0.141	+			35042	SADSASLAK	9	26	425.2194097898986	NaN	0	425.2195739746094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SADSASLAK_	ENSG00000120733|ENST00000314358|KDM3B;KDM3B|p.P1317Rfs*10|1|0.45|ENSG00000120733|chr5:138420936-138420936|C/-|frameshift_variant;nc|ENSG00000120733|Q7LBC6-2|KDM3B	54.776311868738084	0.17377682019723872	1				NaN	NaN	0	NaN	974	2910	3885
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3903	16.82	NaN	1533.5	30	0	380.16	0.143			+	22423	KTKTHAPLI	9	33	504.81327295385404	NaN	0	504.8133850097656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTKTHAPLI_	REV__ENSG00000079841|ENST00000521978|RIMS1	24.20275056022122	0.35506675290109213	1				NaN	NaN	0	NaN	985	2916	3902
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3976	17.011	NaN	3966	30	0	1969.7	0.142	+			14621	GTGKTTFVK	9	55	469.76863289305	937.5227128529	2	469.7690124511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTGKTTFVK_	ENSG00000132341|ENST00000543796|RAN;ENST00000464211.6_1_12:131357386-131359105:+|nuORF;ENST00000537745.5_1_12:131357386-131357560:+|nuORF;ENST00000541630.5_1_12:131357386-131357560:+|nuORF	61.691277971877994	0.19951612995419254	1				NaN	NaN	0	NaN	1034	2940	3975
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4058	17.202	NaN	1768.8	30	0	539.18	0.141	+			12188	GANVPTTAK	9	33	429.7376183564587	857.4606837797174	2	429.73779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GANVPTTAK_	ENSG00000083535|ENST00000326291|PIBF1;nc|ENSG00000083535|Q8WXW3-2|PIBF1	63.53385203322761	0.18415635464017938	1				NaN	NaN	0	NaN	1098	2958	4057
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4099	17.297	NaN	752.43	30	0	114.71	0.142	+			22546	KTRSCAGGLA	10	34	482.2556974692815	NaN	0	482.2558898925781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTRSCAGGLA_	ENST00000436575.5_1_7:6485721-6523688:-|nuORF	52.936696900407355	0.28703625529470256	1				NaN	NaN	0	NaN	1130	2967	4098
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4171	17.469	NaN	3629.8	30	0	682.88	0.141	+			20685	KGPGAARAL	9	42	420.755780227308	839.497007521416	2	420.7563781738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KGPGAARAL_	ENST00000483273.2_1_1:16133986-16134037:-|nuORF	71.29570347882199	0.13518600952103718	1				NaN	NaN	0	NaN	1184	2985	4170
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4182	17.494	NaN	825.12	30	0	62.73	0.15				-1	WCCARVWFQPE	11	33	494.5513610839844	NaN	0	494.5513610839844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_WC(Carbamidomethyl (C))CARVWFQPE_	ENST00000404625.5_1_7:22765527-22765611:+|nuORF	17.16674453292914	0.456735970842152	1				NaN	NaN	0	NaN	1192	2988	4181
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4223	17.588	NaN	15208	30	0	6649.1	0.214	+			22147	KSQTLLGK	8	64	437.7709692579059	873.5273855826118	2	437.7716369628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSQTLLGK_	ENSG00000177169|ENST00000321867|ULK1;ULK1|p.G873Afs*18|1|0.22|ENSG00000177169|chr12:131919313-131919313|G/-|frameshift_variant;ULK1|p.H274Ifs*109|2|0.29|ENSG00000177169|chr12:131910259-131910259|T/-|frameshift_variant;ULK1|p.S638Afs*9|1|0.32|ENSG00000177169|chr12:131916426-131916426|C/-|frameshift_variant;ULK1|p.T575Rfs*72|1|0.43|ENSG00000177169|chr12:131915998-131915998|C/-|frameshift_variant	110.11987700582712	0.24509564897437786	1				NaN	NaN	0	NaN	1224	2997	4222
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4224	17.592	NaN	1178.1	30	0	216.4	0.035			+	43096	TEPISSTFL	9	39	497.75628373085675	993.4980145285135	2	497.75701904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEPISSTFL_	REV__ENSG00000163328|ENST00000392552|GPR155	45.9519527083369	0.35044536499095585	1				NaN	NaN	0	NaN	1225	2997	4222
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4254	17.657	NaN	13709	30	0	3217.4	0.214	+			19417	KAPSAARSL	9	66	450.7664039678521	899.5182550025042	2	450.7669372558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAPSAARSL_	ENSG00000083937|ENST00000263780|CHMP2B;ENST00000466696.1_1_3:87302513-87302969:+|nuORF;nc|ENSG00000083937|Q9UQN3-2|CHMP2B	43.650786325866115	0.37743712540499297	1				NaN	NaN	0	NaN	1249	3003	4253
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4255	17.661	NaN	7785.8	30	0	4344.6	0.106	+			32320	QTSGSLVSK	9	58	453.74794412762157	905.4813353220432	2	453.74853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QTSGSLVSK_	ENSG00000168564|ENST00000504169|CDKN2AIP	85.86182877749512	0.07653218437724067	1				NaN	NaN	0	NaN	1250	3003	4253
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4256	17.663	NaN	8712.2	30	0	1389.7	0.106				-1	FEHYRRACRRC	11	83	537.5884449991047	1609.7435055975138	3	537.5902099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_FEHYRRAC(Carbamidomethyl (C))RRC(Carbamidomethyl (C))_	ENST00000585553.5_1_17:43213984-43221005:+|nuORF;nc|ENSG00000181513|Q8NC06-3|ACBD4;nc|ENSG00000181513|Q8NC06|ACBD4	5.698786898958082	0.8438047409760123	1				NaN	NaN	0	NaN	1251	3003	4253
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4257	17.665	NaN	2067.5	30	0	649.69	0.106	+			22304	KTETPIVSK	9	42	501.79460098901853	1001.5746490448371	2	501.79583740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTETPIVSK_	ENSG00000124164|ENST00000475243|VAPB;ENST00000463370.5_1_20:57007450-57019288:+|nuORF;ENST00000476395.1_1_20:57015848-57019288:+|nuORF	59.93077597824379	0.21419174904018318	1				NaN	NaN	0	NaN	1252	3003	4253
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4258	17.666	NaN	1706.9	30	0	401.76	0.037	+			4323	ATGKWKQISK	10	38	382.8926086128152	NaN	0	382.89208984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATGKWKQISK_	ENSG00000127080|ENST00000287996|IPPK	32.75053402867276	0.3926392905881664	1				NaN	NaN	0	NaN	1253	3003	4253
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4316	17.798	NaN	17692	30	0	2161	0.214			+	-1	KYCENVGEWID	11	64	471.54251867272865	1411.605726618386	3	471.54327392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_KYC(Carbamidomethyl (C))ENVGEWID_	REV__ATG10|p.H133N|1|0.41|ENSG00000152348|chr5:82178531-82178531|C/A|missense_variant	33.03940026070387	0.6432348334061824	1				NaN	NaN	0	NaN	1299	3015	4315
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4317	17.802	NaN	1545.7	30	0	315.92	0.106	+			27057	MADPKGKAY	9	49	490.7467110679878	979.4788692027756	2	490.7473449707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MADPKGKAY_	ENSG00000137038|ENST00000358227|DMAC1;ENST00000469050.1_1_9:7798575-7833931:-|nuORF;ENST00000484082.1_1_9:7798575-7800059:-|nuORF;nc|ENSG00000137038|Q96GE9|DMAC1	82.24051045832904	0.08786059719216216	1				NaN	NaN	0	NaN	1300	3015	4315
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4318	17.804	NaN	1002.1	30	0	295.86	0.033	+			4273	ATGGMANVK	9	25	424.718784570572	NaN	0	424.7185974121094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATGGMANVK_	ENSG00000136936|ENST00000375128|XPA;XPA|p.A65T|1|0.24|ENSG00000136936|chr9:97693739-97693739|C/T|missense_variant	47.657333605630114	0.2228375344433429	1				NaN	NaN	0	NaN	1301	3015	4315
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4370	17.917	NaN	39856	30	0	9337.1	0.141				-1	 	0	73	425.23678113322563	848.4590093332513	2	425.2376403808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	1344	3024	4369
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4388	17.955	NaN	7299	30	0	461.87	0.214	+			32981	REEEKVSAV	9	65	523.7766237208886	1045.538694508577	2	523.778076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_REEEKVSAV_	ENSG00000140262|ENST00000333725|TCF12;nc|ENSG00000140262|Q99081-2|TCF12;nc|ENSG00000140262|Q99081-4|TCF12;nc|ENSG00000140262|Q99081|TCF12	85.86182877749512	0.07653218437724067	1				NaN	NaN	0	NaN	1359	3027	4387
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4389	17.959	NaN	4235.9	30	0	1251.3	0.106	+			35784	SEAGSHTL	8	44	401.18963668215144	800.3647204311029	2	401.1905517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEAGSHTL_	ENSG00000204592|ENST00000376630|HLA-E;ENSG00000204642|ENST00000259951|HLA-F;ENSG00000234745|ENST00000412585|HLA-B;ENST00000474381.1_1_6:31323854-31324663:-|nuORF;HLA-B|p.G124Wfs*15|1|0.18|ENSG00000234745|chr6:31356416-31356417|-/A|frameshift_variant;HLA-B|p.H215Tfs*11|1|0.35|ENSG00000234745|chr6:31355569-31355569|G/-|frameshift_variant;HLA-B|p.P209Qfs*5|6|0.16|ENSG00000234745|chr6:31355586-31355586|G/-|frameshift_variant;HLA-B|p.V306Afs*13|1|0.49|ENSG00000234745|chr6:31355202-31355202|A/-|frameshift_variant;HLA-B|p.V312Cfs*22|1|0.28|ENSG00000234745|chr6:31355185-31355186|-/A|frameshift_variant;nc|ENSG00000204642|P30511-2|HLA-F;nc|ENSG00000204642|P30511|HLA-F	47.91560031466742	0.6071945918984287	1				NaN	NaN	0	NaN	1360	3027	4387
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4390	17.961	NaN	1556	30	0	175.63	0.034	+			33139	RERLQAAE	8	41	486.7638023416372	971.5130517500744	2	487.2660217285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RERLQAAE_	CCDC88B|p.W639Gfs*3|1|0.52|ENSG00000168071|chr11:64344456-64344456|T/-|frameshift_variant;ENSG00000168071|ENST00000356786|CCDC88B;ENST00000463837.5_1_11:64107738-64120281:+|nuORF;ENST00000494080.5_1_11:64109984-64120281:+|nuORF;nc|ENSG00000168071|A6NC98-2|CCDC88B;nc|ENSG00000168071|A6NC98-4|CCDC88B	39.252832667884924	0.6609488554722044	1				NaN	NaN	0	NaN	1361	3027	4387
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4408	17.998	NaN	1695.7	30	0	510.69	0.141			+	7057	CTKSAHTK	8	32	438.2233724578462	874.4321919824924	2	438.2234191894531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CTKSAHTK_	REV__ESYT3|p.T499A|1|0.38|ENSG00000158220|chr3:138469496-138469496|A/G|missense_variant	35.61828744233558	0.6843154725607303	1				NaN	NaN	0	NaN	1376	3030	4407
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4426	18.036	NaN	7370.5	30	0	3295.2	0.141	+			14620	GTGKTLLAK	9	57	444.77925811969607	887.5439633061922	2	444.7795715332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTGKTLLAK_	ENSG00000100764|ENST00000261303|PSMC1;ENSG00000124587|ENST00000304611|PEX6;ENSG00000141385|ENST00000269143|AFG3L2;ENSG00000167216|ENST00000683218|KATNAL2;ENSG00000186625|ENST00000367411|KATNA1;ENST00000418696.5_2_16:90046667-90060229:+|nuORF;ENST00000427658.1_1_16:90057264-90060229:+|nuORF;ENST00000436447.5_1_16:90046667-90060229:+|nuORF;ENST00000437774.5_1_16:90055269-90060229:+|nuORF;ENST00000481905.5_1_6:149919348-149924475:-|nuORF;ENST00000557444.5_1_16:90055269-90057690:+|nuORF;nc|ENSG00000100764|P62191-2|PSMC1;nc|ENSG00000124587|Q13608-3|PEX6;nc|ENSG00000167216|Q8IYT4-2|KATNAL2;nc|ENSG00000186625|O75449-2|KATNA1;tr|U7SJH8|U7SJH8_FUSNUATP-dependentzincmetalloproteaseFtsHOS=FusobacteriumnucleatumCTI-5OX=1316586GN=ftsHPE=3SV=1	93.1432384553994	0.056003526918089595	1				NaN	NaN	0	NaN	1391	3033	4425
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4440	18.067	NaN	4796.5	30	0	870.9	0.214				-1	 	0	74	603.9531161488756	1808.8375190468264	3	604.2892456054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	1402	3036	4439
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4441	18.071	NaN	4273	30	0	932.51	0.036	+			20749	KGWKPRRK	8	47	352.55735049083677	NaN	0	352.5572814941406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KGWKPRRK_	ADAM9|p.Y678Wfs*15|1|0.05|ENSG00000168615|chr8:39083037-39083038|-/GGAAACC|frameshift_variant	51.33545320467046	1.7418937515398478	1				NaN	NaN	0	NaN	1403	3036	4439
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4509	18.235	NaN	5032.2	30	0	2471.4	0.146				-1	STCQRFVEK	9	32	385.52565997045144	NaN	0	385.52587890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_STC(Carbamidomethyl (C))QRFVEK_	ENSG00000181610|ENST00000313608|MRPS23	31.529811441608018	0.3183796599642538	1				NaN	NaN	0	NaN	1453	3054	4508
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4554	18.353	NaN	2102	30	0	373.95	0.142	+			49596	VYGKTSHL	8	42	452.747884432423	903.481215931646	2	453.2501525878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYGKTSHL_	ENSG00000105866|ENST00000222584|SP4;ENSG00000164651|ENST00000418710|SP8;ENSG00000172845|ENST00000310015|SP3;ENSG00000185591|ENST00000327443|SP1;ENSG00000204335|ENST00000375281|SP5;ENSG00000217236|ENST00000394967|SP9;ENST00000465379.1_1_2:174774671-174778005:-|nuORF;nc|ENSG00000164651|Q8IXZ3-1|SP8;nc|ENSG00000164651|Q8IXZ3-2|SP8;nc|ENSG00000164651|Q8IXZ3|SP8;nc|ENSG00000172845|Q02447-2|SP3;nc|ENSG00000172845|Q02447-3|SP3;nc|ENSG00000172845|Q02447-4|SP3;nc|ENSG00000172845|Q02447-5|SP3;nc|ENSG00000172845|Q02447-6|SP3;nc|ENSG00000185591|P08047-2|SP1;nc|ENSG00000185591|P08047-3|SP1;SP3|p.G708Vfs*20|1|0.27|ENSG00000172845|chr2:173910166-173910166|T/-|frameshift_variant;SP8|p.E482Sfs*8|1|0.36|ENSG00000164651|chr7:20784320-20784320|G/-|frameshift_variant	66.42927471994793	0.4381325844043345	1				NaN	NaN	0	NaN	1483	3069	4553
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4601	18.473	NaN	7426.2	30	0	1637.5	0.142	+			107	AAEKGVRTL	9	54	472.7796447632058	943.5447365932116	2	472.7802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAEKGVRTL_	ENSG00000105355|ENST00000221957|PLIN3;nc|ENSG00000105355|O60664-3|PLIN3;nc|ENSG00000105355|O60664-4|PLIN3	78.26377905018397	0.10505600812668463	1				NaN	NaN	0	NaN	1515	3084	4600
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4614	18.502	NaN	1516.4	30	0	259.88	0.143			+	44933	TVANLHVVQ	9	45	490.7794601739239	979.5443674146478	2	490.7800598144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVANLHVVQ_	REV__ENSG00000165724|ENST00000298585|ZMYND19	51.33545320467046	0.2872990594074956	1				NaN	NaN	0	NaN	1525	3087	4613
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4630	18.543	NaN	6395.7	30	0	1680.8	0.214	+			40294	STSSPYVSK	9	48	478.23971609587875	954.4648792585575	2	478.2401123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STSSPYVSK_	ENSG00000137501|ENST00000359152|SYTL2;ENST00000438197.2_1_11:85444955-85468786:-|nuORF;nc|ENSG00000137501|Q9HCH5-13|SYTL2;nc|ENSG00000137501|Q9HCH5-14|SYTL2;nc|ENSG00000137501|Q9HCH5-15|SYTL2;nc|ENSG00000137501|Q9HCH5-6|SYTL2;nc|ENSG00000137501|Q9HCH5|SYTL2;SYTL2|p.Q663Tfs*35|1|0.14|ENSG00000137501|chr11:85709344-85709345|-/T|frameshift_variant	82.7504851949679	0.08565546331141553	1				NaN	NaN	0	NaN	1535	3093	4629
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4631	18.546	NaN	1462.8	30	0	576.78	0.034	+			35799	SEAKPAAVAA	10	31	457.75062332767834	NaN	0	457.7510070800781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEAKPAAVAA_	ENSG00000137076|ENST00000314888|TLN1;ENST00000486788.2_1_9:35704327-35706084:-|nuORF;nc|ENSG00000137076|Q9Y490-2|TLN1	44.377184641726394	0.34115073642966565	1				NaN	NaN	0	NaN	1536	3093	4629
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4690	18.684	NaN	2141.8	30	0	458.62	0.143	+			22957	KVQTAVTMK	9	54	503.2914829214564	1004.5684129097128	2	503.292236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVQTAVTMK_	ENSG00000131165|ENST00000397901|CHMP1A;ENST00000550872.1_1_16:89715668-89724092:-|nuORF	104.01359247289065	0.03510646158778409	1				NaN	NaN	0	NaN	1580	3108	4689
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4736	18.788	NaN	2362.6	30	0	671.73	0.14	+			45942	VASAAKLGA	9	37	394.23748779296875	NaN	0	394.23748779296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VASAAKLGA_	ENSG00000170835|ENST00000372080|CEL;nc|ENSG00000170835|P19835-2|CEL	49.44154591367651	0.21054156626303966	1				NaN	NaN	0	NaN	1617	3117	4735
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4752	18.823	NaN	5243.8	30	0	1903	0.214			+	-1	LCGWSTVL	8	55	468.23734782578646	934.4601427183729	2	468.2375793457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_LC(Carbamidomethyl (C))GWSTVL_	REV__ENST00000556510.1_1_14:24899456-24899822:+|nuORF	52.29916861842294	0.578018602984656	1				NaN	NaN	0	NaN	1630	3120	4751
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4753	18.826	NaN	3308.2	30	0	1261.5	0.106			+	4977	ATQVSWNRDLS	11	29	426.21478762987897	1275.622533489837	3	426.21527099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATQVSWNRDLS_	REV__ENSG00000137821|ENST00000260382|LRRC49;REV__ENST00000559422.1_1_15:71272454-71302150:+|nuORF;REV__LRRC49|p.P583Tfs*9|1|0.43|ENSG00000137821|chr15:71037214-71037215|-/A|frameshift_variant;REV__nc|ENSG00000137821|Q8IUZ0-2|LRRC49;REV__nc|ENSG00000137821|Q8IUZ0-3|LRRC49;REV__nc|ENSG00000137821|Q8IUZ0-4|LRRC49	26.749707702089633	0.7092085788826945	1				NaN	NaN	0	NaN	1631	3120	4751
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4754	18.828	NaN	1088.1	30	0	335.09	0.032	+			14395	GTALKQPA	8	22	393.22874700378236	784.4429410743647	2	393.22930908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTALKQPA_	ENSG00000170166|ENST00000306324|HOXD4	47.91560031466742	0.6071945918984287	1				NaN	NaN	0	NaN	1632	3120	4751
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4772	18.866	NaN	14864	30	0	5059.1	0.214	+			15585	GVHGGLINK	9	57	447.76141661499884	893.5082802967977	2	447.76171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVHGGLINK_	ENSG00000108518|ENST00000225655|PFN1	106.41520541750704	0.03265588207292361	1				NaN	NaN	0	NaN	1647	3123	4771
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4773	18.869	NaN	2205.3	30	0	372.81	0.033	+			41273	SVLKGAVTK	9	49	451.787353515625	NaN	0	451.787353515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVLKGAVTK_	ENSG00000163867|ENST00000357182|ZMYM6;ENST00000493328.5_1_1:35455862-35480681:-|nuORF;nc|ENSG00000163867|O95789-1|ZMYM6;ZMYM6|p.F804Lfs*6|1|0.38|ENSG00000163867|chr1:34988670-34988670|A/-|frameshift_variant;ZMYM6|p.L686Ifs*41|1|0.03|ENSG00000163867|chr1:34992324-34992325|-/GAAAGGAAAAGAAAAT|frameshift_variant;ZMYM6|p.N1298Ifs*9|1|0.15|ENSG00000163867|chr1:34987189-34987189|T/-|frameshift_variant;ZMYM6|p.N724Mfs*15|1|0.42|ENSG00000163867|chr1:34988911-34988911|T/-|frameshift_variant	90.60085204095205	0.040385177724871185	1				NaN	NaN	0	NaN	1648	3123	4771
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4791	18.907	NaN	5175	30	0	1984	0.141			+	19973	KEGVTVTK	8	51	431.2551522193256	860.4957515054513	2	431.25555419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEGVTVTK_	REV__ENSG00000066933|ENST00000356056|MYO9A;REV__ENST00000563542.5_1_15:72185266-72338904:-|nuORF;REV__MYO9A|p.L1961*|2|0.14|ENSG00000066933|chr15:71878089-71878089|A/-|frameshift_variant;REV__MYO9A|p.Y1422Ifs*8|1|0.18|ENSG00000066933|chr15:71898239-71898239|A/-|frameshift_variant;REV__nc|ENSG00000066933|B2RTY4-2|MYO9A;REV__nc|ENSG00000066933|B2RTY4-3|MYO9A;REV__nc|ENSG00000066933|B2RTY4-4|MYO9A;REV__nc|ENSG00000066933|B2RTY4-5|MYO9A	124.08010499294276	0.22872207833199332	1				NaN	NaN	0	NaN	1663	3126	4790
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4805	18.937	NaN	2246.5	30	0	1290.4	0.214			+	43981	TPFVRTPGQ	9	23	334.8503595957354	1001.5292493874063	3	334.8511962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TPFVRTPGQ_	REV__nc|ENSG00000126216|Q96CW5-3|TUBGCP3	21.9598887501803	0.5980208138527809	1				NaN	NaN	0	NaN	1674	3129	4804
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4806	18.941	NaN	1745.7	30	0	451.68	0.036	+			793	AEFKLYLPV	9	37	360.5432000110605	NaN	0	360.2086181640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEFKLYLPV_	ENSG00000070761|ENST00000262498|CFAP20;ENST00000564150.1_1_16:58147931-58149427:-|nuORF	33.51558372728122	0.30835390848773375	1				NaN	NaN	0	NaN	1675	3129	4804
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4817	18.965	NaN	2588.1	30	0	733.65	0.214	+			22507	KTQAISISK	9	54	488.29476356608495	974.5749741989699	2	488.29547119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTQAISISK_	ENSG00000130787|ENST00000253083|HIP1R;ENST00000452196.6_1_12:123320097-123341792:+|nuORF;HIP1R|p.A781Pfs*24|1|0.19|ENSG00000130787|chr12:122859467-122859467|G/-|frameshift_variant;HIP1R|p.E1021Vfs*2|1|0.32|ENSG00000130787|chr12:122861412-122861445|AGAGGAGGTGGCCATCCGGCCCAGCACTGCCCCC/-|frameshift_variant;HIP1R|p.N345Mfs*4|3|0.29|ENSG00000130787|chr12:122855584-122855584|C/-|frameshift_variant;nc|ENSG00000130787|O75146-2|HIP1R	112.84542089569574	0.026094560706667817	1				NaN	NaN	0	NaN	1683	3132	4816
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4818	18.968	NaN	1285.3	30	0	279.05	0.035	+			16591	HGFREGTTP	9	39	501.2425963048841	1000.4706396765682	2	501.2432861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HGFREGTTP_	ENSG00000145592|ENST00000274242|RPL37;ENST00000504562.1_1_5:40832608-40835123:-|nuORF	39.252832667884924	0.4290233611298554	1				NaN	NaN	0	NaN	1684	3132	4816
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4846	19.03	NaN	3933	30	0	1119.7	0.141	+			23685	LASSLKTQ	8	39	424.2474105927589	846.4802682523178	2	424.2481689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LASSLKTQ_	tr|U7SHY1|U7SHY1_FUSNUP-typeconjugativetransferproteinTrbJOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02195PE=4SV=1	42.396135135203025	0.6414440140393314	1				NaN	NaN	0	NaN	1706	3138	4845
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4859	19.059	NaN	794.66	30	0	72.301	0.214			+	9695	EMAQGTIWSV	10	43	561.2686767578125	NaN	0	561.2686767578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EMAQGTIWSV_	REV__ENSG00000214655|ENST00000604729|ZSWIM8;REV__ENST00000433366.6_1_10:75557251-75561274:+|nuORF;REV__nc|ENSG00000214655|A7E2V4-2|ZSWIM8;REV__nc|ENSG00000214655|A7E2V4-3|ZSWIM8;REV__nc|ENSG00000214655|A7E2V4-4|ZSWIM8;REV__nc|ENSG00000214655|A7E2V4-5|ZSWIM8;REV__nc|ENSG00000214655|A7E2V4|ZSWIM8	25.57405402267927	0.4162033004763879	1				NaN	NaN	0	NaN	1716	3141	4858
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4860	19.063	NaN	715.33	30	0	107.64	0.032	+			27777	MRPSVSAG	8	36	402.70467636670907	803.3947998002182	2	402.70526123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MRPSVSAG_	ENST00000367025.7_1_1:209933439-209933502:+|nuORF	47.91560031466742	0.6071945918984287	1				NaN	NaN	0	NaN	1717	3141	4858
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4875	19.094	NaN	658.49	30	0	221.4	0.139	+			46026	VAVSVKPG	8	21	378.7344563353447	NaN	0	378.7342529296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VAVSVKPG_	ENSG00000175198|ENST00000376285|PCCA;nc|ENSG00000175198|P05165-2|PCCA	31.954861631926434	1.7418937515398478	1				NaN	NaN	0	NaN	1729	3144	4874
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4892	19.13	NaN	1562.1	30	0	779.2	0.214			+	26827	LVTAAAVDAG	10	24	444.24505881829043	886.4755647033809	2	444.24505615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LVTAAAVDAG_	REV__ENSG00000100626|ENST00000448469|GALNT16;REV__nc|ENSG00000100626|Q8N428-2|GALNT16	35.61828744233558	0.588957954432594	1				NaN	NaN	0	NaN	1743	3147	4891
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4893	19.134	NaN	518.15	30	0	104.05	0.106				-1	MRRRTCCWRCW	11	30	576.5921630859375	NaN	0	576.5921630859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	3 Carbamidomethyl (C)	_MRRRTC(Carbamidomethyl (C))C(Carbamidomethyl (C))WRC(Carbamidomethyl (C))W_	ENST00000375224.1_1_1:19430583-19430625:-|nuORF	1.5229847967890655	0.456735970842152	1				NaN	NaN	0	NaN	1744	3147	4891
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4894	19.136	NaN	1092.8	30	0	369.43	0.033	+			31516	QLGAWAPL	8	26	428.2413330078125	NaN	0	428.2413330078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QLGAWAPL_	ENST00000299088.10_1_14:23468311-23468461:-|nuORF;ENST00000397379.7_1_14:23468311-23470176:-|nuORF;ENST00000553958.5_1_14:23468311-23469174:-|nuORF	29.841539824830324	1.7418937515398478	1				NaN	NaN	0	NaN	1745	3147	4891
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4920	19.194	NaN	2775.5	30	0	530.46	0.214			+	22581	KTSTTRLGSF	10	51	549.3008902746626	1096.5872276161251	2	549.3021240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTSTTRLGSF_	REV__ENSG00000168077|ENST00000301904|SCARA3;REV__nc|ENSG00000168077|Q6AZY7-2|SCARA3	51.52775601994872	0.4429225830406686	1				NaN	NaN	0	NaN	1765	3153	4919
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4921	19.197	NaN	1621.7	30	0	551.5	0.033	+			47247	VMRDPASK	8	38	452.23953941830865	902.4645259034173	2	452.23974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VMRDPASK_	ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1	47.657333605630114	0.6087971902037268	1				NaN	NaN	0	NaN	1766	3153	4919
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4947	19.255	NaN	38800	30	0	6532.1	0.153			+	-1	WCRWCCTRRRM	11	78	557.5841178359758	NaN	0	557.5848388671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_WCRWC(Carbamidomethyl (C))C(Carbamidomethyl (C))TRRRM_	REV__ENST00000375224.1_1_1:19430583-19430625:-|nuORF	5.142368927146027	0.456735970842152	1				NaN	NaN	0	NaN	1786	3159	4946
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4965	19.295	NaN	13161	30	0	7547.7	0.214				-1	 	0	38	334.8503595957354	1001.5292493874063	3	334.8514404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	1801	3162	4964
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4966	19.298	NaN	19683	30	0	11327	0.106	+			33865	RRLCERTRK	9	56	406.57187340752046	1216.6937908227615	3	406.5725402832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RRLCERTRK_	ENST00000380636.1_1_X:12993858-12993984:+|nuORF	30.503639358989545	0.5181749237905803	1				NaN	NaN	0	NaN	1802	3162	4964
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4967	19.3	NaN	2379.7	30	0	1060.5	0.033			+	34933	SAAGSPRPL	9	25	428.2379077795191	NaN	0	428.2375793457031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAAGSPRPL_	REV__ENST00000569473.1_1_15:89878657-89878771:+|nuORF	31.529811441608018	0.3183796599642538	1				NaN	NaN	0	NaN	1803	3162	4964
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4985	19.338	NaN	5308.4	30	0	949.14	0.142	+			16127	HEAATKAVL	9	51	470.2662950505949	938.5180371679899	2	470.26666259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HEAATKAVL_	DHRS7|p.D149Ifs*2|1|0.07|ENSG00000100612|chr14:60153127-60153128|-/ATAT|frameshift_variant;ENSG00000100612|ENST00000557185|DHRS7;ENST00000556502.1_1_14:60619584-60632027:-|nuORF;nc|ENSG00000100612|Q9Y394-2|DHRS7	139.97047562133406	0.010493916756945389	1				NaN	NaN	0	NaN	1818	3165	4984
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5013	19.401	NaN	5773.4	30	0	1174.7	0.141	+			38449	SSAPPLTGK	9	54	429.2396406408813	856.4647283485626	2	429.2401428222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSAPPLTGK_	ENSG00000100105|ENST00000266269|PATZ1;nc|ENSG00000100105|Q9HBE1-2|PATZ1;nc|ENSG00000100105|Q9HBE1-3|PATZ1;nc|ENSG00000100105|Q9HBE1-4|PATZ1;PATZ1|p.G285Pfs*14|1|0.11|ENSG00000100105|chr22:31344749-31344750|CC/-|frameshift_variant	72.87924865735499	0.12833875048249987	1				NaN	NaN	0	NaN	1840	3171	5012
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5083	19.562	NaN	2340.1	30	0	1256.9	0.214	+			14386	GTAKSQFLK	9	43	490.2819543543452	NaN	0	490.2817077636719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTAKSQFLK_	ENSG00000073111|ENST00000265056|MCM2;ENST00000474964.5_1_3:127323572-127340613:+|nuORF;ENST00000477668.5_1_3:127323572-127337961:+|nuORF	52.936696900407355	0.1864545979552969	1				NaN	NaN	0	NaN	1895	3186	5082
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5084	19.566	NaN	1287.7	30	0	307.54	0.106			+	-1	MWRRWMMCRDL	11	39	547.9122924804688	NaN	0	547.9122924804688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))M(Oxidation (M))WRRWMMCRDL_	REV__ENST00000393104.6_1_10:112641263-112642826:+|nuORF	9.64613948735714	0.456735970842152	1				NaN	NaN	0	NaN	1896	3186	5082
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5085	19.568	NaN	2652.6	30	0	385.97	0.106	+			38963	SSRGPLPVK	9	50	470.7819205067008	939.5492880802017	2	470.7823791503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSRGPLPVK_	ENSG00000147274|ENST00000320676|RBMX;ENSG00000213516|ENST00000652648|RBMXL1;nc|ENSG00000147274|P38159-2|RBMX	41.42661286455405	0.403525789677298	1				NaN	NaN	0	NaN	1897	3186	5082
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5086	19.57	NaN	545.18	30	0	71.867	0.033	+			15931	HADVGKEL	8	30	434.7292785644531	NaN	0	434.7292785644531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HADVGKEL_	ENSG00000144554|ENST00000675286|FANCD2;ENST00000438741.1_1_3:10076402-10082221:+|nuORF;FANCD2|p.I1249Nfs*2|1|0.48|ENSG00000144554|chr3:10090346-10090347|-/A|frameshift_variant;FANCD2|p.N890Ifs*14|1|0.36|ENSG00000144554|chr3:10073312-10073312|A/-|frameshift_variant;nc|ENSG00000144554|Q9BXW9-1|FANCD2;nc|ENSG00000144554|Q9BXW9-3|FANCD2;nc|ENSG00000144554|Q9BXW9-4|FANCD2	79.45101966838831	1.7418937515398478	1				NaN	NaN	0	NaN	1898	3186	5082
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5103	19.604	NaN	27512	30	0	8935.9	0.147	+			14662	GTIEKSKLITK	11	85	406.58631658613155	1216.7371203585947	3	406.58721923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTIEKSKLITK_	ENSG00000144426|ENST00000683969|NBEAL1;NBEAL1|p.A1274Qfs*17|1|0.1|ENSG00000144426|chr2:203135766-203135766|A/-|frameshift_variant;NBEAL1|p.F1670Lfs*25|1|0.21|ENSG00000144426|chr2:203144843-203144843|T/-|frameshift_variant;NBEAL1|p.F2315Lfs*2|1|0.17|ENSG00000144426|chr2:203193900-203193900|T/-|frameshift_variant;NBEAL1|p.K2562Rfs*15|1|0.41|ENSG00000144426|chr2:203209306-203209306|A/-|frameshift_variant;NBEAL1|p.N2072Kfs*10|1|0.35|ENSG00000144426|chr2:203172825-203172826|-/A|frameshift_variant;NBEAL1|p.T1311Nfs*3|1|0.08|ENSG00000144426|chr2:203135875-203135876|-/A|frameshift_variant;nc|ENSG00000144426|Q6ZS30-1|NBEAL1;nc|ENSG00000144426|Q6ZS30|NBEAL1	85.92353377893507	0.11546253517298165	1				NaN	NaN	0	NaN	1912	3189	5102
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5116	19.633	NaN	1560.2	30	0	393.84	0.214	+			30912	QELAKTKL	8	42	465.7845592309409	NaN	0	465.7841796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QELAKTKL_	ENSG00000022567|ENST00000517878|SLC45A4;nc|ENSG00000022567|Q5BKX6-2|SLC45A4;nc|ENSG00000022567|Q5BKX6-3|SLC45A4;nc|ENSG00000022567|Q5BKX6|SLC45A4;SLC45A4|p.K543Rfs*46|1|0.44|ENSG00000022567|chr8:141218014-141218014|G/-|frameshift_variant	53.351449002276354	1.7418937515398478	1				NaN	NaN	0	NaN	1922	3192	5115
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5117	19.637	NaN	1037.9	30	0	170.98	0.106	+			39242	STAKSQFLK	9	45	505.2871987760909	NaN	0	505.28717041015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STAKSQFLK_	ENSG00000076003|ENST00000264156|MCM6;ENST00000492091.1_1_2:136609063-136622601:-|nuORF;MCM6|p.R771Efs*3|1|0.33|ENSG00000076003|chr2:135844583-135844583|T/-|frameshift_variant	54.722347961057174	0.17414871455573902	1				NaN	NaN	0	NaN	1923	3192	5115
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5118	19.639	NaN	1082.1	30	0	204.23	0.036				-1	HVNKSHTMC	9	44	557.2526952324062	NaN	0	557.2525024414062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_HVNKSHTMC(Carbamidomethyl (C))_	ENSG00000131355|ENST00000253673|ADGRE3;nc|ENSG00000131355|Q9BY15-2|ADGRE3	40.77816245573522	0.2702456086868081	1				NaN	NaN	0	NaN	1924	3192	5115
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5134	19.672	NaN	1547.4	30	0	224.67	0.144	+			19769	KEAETRAEF	9	49	540.7707590504391	NaN	0	540.7710571289062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEAETRAEF_	CON__Q3SX28;ENSG00000140416|ENST00000403994|TPM1;ENSG00000143549|ENST00000651641|TPM3;ENSG00000167460|ENST00000643579|TPM4;ENSG00000198467|ENST00000645482|TPM2;ENST00000368528.3_1_3:27674554-27675208:+|nuORF;ENST00000397772.2_1_20:32500135-32500381:-|nuORF;ENST00000469717.5_1_1:154130117-154143232:-|nuORF;ENST00000520239.1_1_8:70042334-70042577:+|nuORF;ENST00000558264.5_1_15:63353458-63363368:+|nuORF;ENST00000559108.1_1_15:63354467-63358183:+|nuORF;nc|ENSG00000140416|P09493-10|TPM1;nc|ENSG00000140416|P09493-2|TPM1;nc|ENSG00000140416|P09493-3|TPM1;nc|ENSG00000140416|P09493-4|TPM1;nc|ENSG00000140416|P09493-5|TPM1;nc|ENSG00000140416|P09493-6|TPM1;nc|ENSG00000140416|P09493-7|TPM1;nc|ENSG00000140416|P09493-8|TPM1;nc|ENSG00000140416|P09493-9|TPM1;nc|ENSG00000143549|P06753-2|TPM3;nc|ENSG00000143549|P06753-3|TPM3;nc|ENSG00000143549|P06753-4|TPM3;nc|ENSG00000143549|P06753-5|TPM3;nc|ENSG00000143549|P06753-6|TPM3;nc|ENSG00000143549|P06753-7|TPM3;nc|ENSG00000167460|P67936-2|TPM4;nc|ENSG00000198467|P07951-2|TPM2;nc|ENSG00000198467|P07951-3|TPM2;TPM3|p.A243T|1|0.29|ENSG00000143549|chr1:154170448-154170448|C/T|missense_variant	83.6470233535746	0.058886874190800687	1				NaN	NaN	0	NaN	1937	3195	5133
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5148	19.703	NaN	482.2	30	0	54.584	0.142	+			32680	RAFDSAVAK	9	22	482.7641296386719	NaN	0	482.7641296386719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RAFDSAVAK_	ENSG00000132305|ENST00000410111|IMMT;nc|ENSG00000132305|Q16891-2|IMMT;nc|ENSG00000132305|Q16891-3|IMMT;nc|ENSG00000132305|Q16891-4|IMMT	29.170058357718403	0.3302935627494407	1				NaN	NaN	0	NaN	1948	3198	5147
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5162	19.734	NaN	5178.7	30	0	1733.1	0.214	+			4963	ATQTSVVVK	9	50	466.7738594996018	931.5331660660037	2	466.7744445800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATQTSVVVK_	ENSG00000158636|ENST00000695367|EMSY;ENST00000531641.1_1_11:76237526-76255878:+|nuORF;nc|ENSG00000158636|Q7Z589-2|EMSY;nc|ENSG00000158636|Q7Z589-4|EMSY;nc|ENSG00000158636|Q7Z589-5|EMSY;nc|ENSG00000158636|Q7Z589-6|EMSY;nc|ENSG00000158636|Q7Z589|EMSY	154.1183686248401	0.005909203230691971	1				NaN	NaN	0	NaN	1959	3201	5161
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5163	19.737	NaN	2154.2	30	0	798.15	0.033	+			35109	SAGGHPLEL	9	37	440.7300346578033	879.4455163824066	2	440.7303466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAGGHPLEL_	DENND4B|p.L102Pfs*3|1|0.32|ENSG00000198837|chr1:153944070-153944071|-/G|frameshift_variant;DENND4B|p.P955Lfs*5|1|0.53|ENSG00000198837|chr1:153934212-153934212|G/-|frameshift_variant;DENND4B|p.R1054Dfs*76|3|0.43|ENSG00000198837|chr1:153933653-153933653|G/-|frameshift_variant;ENSG00000198837|ENST00000361217|DENND4B	42.396135135203025	0.392153681582562	1				NaN	NaN	0	NaN	1960	3201	5161
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5176	19.765	NaN	1920	30	0	376.68	0.141			+	38483	SSATIGPKP	9	39	429.2396406408813	856.4647283485626	2	429.2400817871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSATIGPKP_	REV__ENSG00000114423|ENST00000394030|CBLB;REV__nc|ENSG00000114423|Q13191-2|CBLB;REV__nc|ENSG00000114423|Q13191-3|CBLB	42.396135135203025	0.392153681582562	1				NaN	NaN	0	NaN	1970	3204	5175
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5218	19.861	NaN	36515	30	0	10533	0.144	+			3052	ASFKMDPLI	9	50	341.18442813376345	1020.5314550014904	3	341.1858215332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASFKMDPLI_	ENSG00000010282|ENST00000441594|HHATL	56.72105179125745	0.24094814563026265	1				NaN	NaN	0	NaN	2003	3213	5217
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5236	19.9	NaN	6051.1	30	0	1542.6	0.141	+			42800	TEAPLNPK	8	55	435.23985080156655	868.4651486699331	2	435.2398376464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEAPLNPK_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000403258.1_1_6:88986231-88986483:-|nuORF;ENST00000446382.2_1_9:6834760-6835018:+|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000502306.1_1_5:15450853-15451165:+|nuORF;ENST00000567299.1_1_19:9629420-9629708:+|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;nc|ENSG00000204434|Q9BYX7|POTEKP	76.7741389293348	0.3504530765139327	1				NaN	NaN	0	NaN	2018	3216	5235
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5309	20.068	NaN	1278	30	0	336.64	0.144	+			48644	VTSQFISKK	9	28	346.53801162475656	NaN	0	346.5380859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTSQFISKK_	ENSG00000165458|ENST00000298229|INPPL1;ENST00000535985.1_1_11:71944736-71950103:+|nuORF;INPPL1|p.P976Hfs*155|1|0.31|ENSG00000165458|chr11:72237165-72237165|C/-|frameshift_variant;INPPL1|p.P977Tfs*7|1|0.5|ENSG00000165458|chr11:72237164-72237165|-/C|frameshift_variant;INPPL1|p.R1156Gfs*46|2|0.42|ENSG00000165458|chr11:72237704-72237704|C/-|frameshift_variant;nc|ENSG00000165458|O15357-2|INPPL1	33.921630207806714	0.3063038642147651	1				NaN	NaN	0	NaN	2076	3231	5308
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5338	20.133	NaN	1278.3	30	0	342.49	0.14	+			34921	SAAGAAFTK	9	35	412.2194118228194	NaN	0	412.2192687988281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAAGAAFTK_	ENSG00000258315|ENST00000439424|C17orf49;ENST00000549857.1_1_17:6918176-6918548:+|nuORF;nc|ENSG00000258315|Q8IXM2-2|BAP18;nc|ENSG00000258315|Q8IXM2-3|BAP18	104.01359247289065	0.015103351932921906	1				NaN	NaN	0	NaN	2099	3237	5337
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5366	20.196	NaN	3916.3	30	0	1307.8	0.146	+			35276	SALTDKAIVKK	11	51	391.910811522937	1172.7106051690112	3	391.9114074707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SALTDKAIVKK_	ENSG00000176485|ENST00000415826|PLAAT3;ENST00000394613.3_1_11:63342419-63381578:-|nuORF	61.76455937419982	0.30770400073182314	1				NaN	NaN	0	NaN	2121	3243	5365
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5372	20.213	NaN	2278.1	30	0	303.62	0.143	+			34964	SAAKTFITK	9	58	483.78404179627523	965.5535306593505	2	483.7848205566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAAKTFITK_	ENSG00000146247|ENST00000275034|PHIP;ENST00000479165.1_1_6:79650412-79665440:-|nuORF	91.26522074875469	0.06129826844580791	1				NaN	NaN	0	NaN	2124	3246	5371
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5445	20.38	NaN	906.42	30	0	200.89	0.143	+			34394	RTSGLATLK	9	40	473.78750507011017	NaN	0	473.78778076171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTSGLATLK_	BTBD7|p.F167Lfs*15|1|0.27|ENSG00000011114|chr14:93294519-93294519|A/-|frameshift_variant;BTBD7|p.H927Tfs*21|1|0.2|ENSG00000011114|chr14:93242893-93242894|-/T|frameshift_variant;BTBD7|p.N566Mfs*22|1|0.26|ENSG00000011114|chr14:93253702-93253702|T/-|frameshift_variant;BTBD7|p.P760Lfs*61|1|0.45|ENSG00000011114|chr14:93246129-93246129|G/-|frameshift_variant;BTBD7|p.P768Qfs*53|2|0.3|ENSG00000011114|chr14:93246105-93246105|G/-|frameshift_variant;BTBD7|p.Y440Mfs*28|1|0.11|ENSG00000011114|chr14:93263838-93263838|A/-|frameshift_variant;ENSG00000011114|ENST00000334746|BTBD7;nc|ENSG00000011114|Q9P203-3|BTBD7	68.84614121027924	0.11159004992091766	1				NaN	NaN	0	NaN	2182	3261	5444
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5457	20.407	NaN	7891.4	30	0	1140.8	0.214			+	7936	DSIKSHVL	8	66	449.7530460495716	897.4915391659432	2	449.753662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DSIKSHVL_	REV__ENSG00000101463|ENST00000376862|SYNDIG1;REV__SYNDIG1-MYH9|1|fusion	56.72105179125745	0.5342425954139568	1				NaN	NaN	0	NaN	2191	3264	5456
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5458	20.411	NaN	11990	30	0	1320.3	0.045				-1	 	0	67	565.9144460924692	1694.7215088776074	3	565.9164428710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	2192	3264	5456
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5467	20.431	NaN	912.76	30	0	125.47	0.214			+	20848	KIKRKKRVL	9	42	584.9229125976562	NaN	0	584.9229125976562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KIKRKKRVL_	REV__ENSG00000062038|ENST00000264012|CDH3;REV__ENST00000542274.5_1_16:68679206-68732300:+|nuORF;REV__ENST00000567674.1_1_16:68721613-68732300:+|nuORF;REV__nc|ENSG00000062038|P22223-2|CDH3	7.690282842768113	0.40727630907727536	1				NaN	NaN	0	NaN	2198	3267	5466
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5468	20.435	NaN	830.9	30	0	202.03	0.035	+			892	AEHLEKSSL	9	38	507.265902580311	NaN	0	507.2655029296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEHLEKSSL_	ENSG00000080345|ENST00000444746|RIF1;nc|ENSG00000080345|Q5UIP0-2|RIF1;RIF1|p.E1442Gfs*4|1|0.39|ENSG00000080345|chr2:151463835-151463836|-/A|frameshift_variant;RIF1|p.K1441Rfs*18|1|0.2|ENSG00000080345|chr2:151463836-151463836|A/-|frameshift_variant;RIF1|p.K1505Rfs*18|3|0.3|ENSG00000080345|chr2:151464027-151464027|A/-|frameshift_variant	67.49366992349736	0.1173583512313808	1				NaN	NaN	0	NaN	2199	3267	5466
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5479	20.458	NaN	1289.1	30	0	284.19	0.141	+			27919	MVAAAPVAVA	10	44	450.2552185058594	NaN	0	450.2552185058594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MVAAAPVAVA_	ENSG00000126016|ENST00000371959|AMOT;nc|ENSG00000126016|Q4VCS5-2|AMOT	26.79610172149135	0.4121907004225123	1				NaN	NaN	0	NaN	2207	3270	5478
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5493	20.489	NaN	1578.2	30	0	282.23	0.143	+			38669	SSIREAISK	9	44	495.7822293464413	989.5499057596826	2	495.78240966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSIREAISK_	ENSG00000196670|ENST00000502412|ZFP62;nc|ENSG00000278970|Q8NB50-2|ZFP62;nc|ENSG00000278970|Q8NB50-3|ZFP62	70.39856735676683	0.13906523160059378	1				NaN	NaN	0	NaN	2218	3273	5492
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5506	20.519	NaN	1934	30	0	598.48	0.141	+			44555	TTAPSLSGK	9	35	431.2369677039222	860.4593824746444	2	431.23773193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTAPSLSGK_	CTNNB1|p.L103Ffs*10|1|0.06|ENSG00000168036|chr3:41225020-41225021|-/TTATTTAAACTATTATACACTA|frameshift_variant;CTNNB1|p.L301Hfs*16|1|0.05|ENSG00000168036|chr3:41225827-41225831|TTCAA/-|frameshift_variant;CTNNB1|p.M271Wfs*5|1|0.08|ENSG00000168036|chr3:41225733-41225733|A/-|frameshift_variant;ENSG00000168036|ENST00000349496|CTNNB1	54.776311868738084	0.25715957988447635	1				NaN	NaN	0	NaN	2228	3276	5505
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5558	20.634	NaN	3662	30	0	434.92	0.214	+			28903	NQPDNLFAGGE	11	58	581.2637329101562	NaN	0	581.2637329101562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NQPDNLFAGGE_	NCAN|p.F1177L|1|0.13|ENSG00000130287|chr19:19245351-19245351|C/A|missense_variant	24.519189625965996	0.45614437233802635	1				NaN	NaN	0	NaN	2271	3285	5557
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5559	20.637	NaN	640.21	30	0	54.328	0.044			+	-1	CLQLYLYC	8	30	538.2513427734375	NaN	0	538.2513427734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_CLQLYLYC(Carbamidomethyl (C))_	REV__ENST00000460485.1_1_2:128047222-128047903:-|nuORF	14.664097394203935	1.7418937515398478	1				NaN	NaN	0	NaN	2272	3285	5557
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5616	20.767	NaN	1605.3	30	0	188.24	0.214	+			2626	AQIKEHLLK	9	45	540.3312307366415	1078.6479085400829	2	540.333740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AQIKEHLLK_	EIF2B5|p.L605Pfs*9|1|0.26|ENSG00000145191|chr3:184143504-184143505|-/C|frameshift_variant;ENSG00000145191|ENST00000648915|EIF2B5;ENST00000481054.5_1_3:183853173-183856676:+|nuORF;ENST00000491144.5_1_3:183853173-183855624:+|nuORF	104.42354056486148	0.0346881550498418	1				NaN	NaN	0	NaN	2317	3297	5615
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5617	20.77	NaN	1272.6	30	0	463.05	0.034	+			44572	TTATFAATK	9	35	456.24498299441507	910.4754130556302	2	456.2458801269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTATFAATK_	ENSG00000141232|ENST00000499247|TOB1;TOB1|p.F274Yfs*52|1|0.06|ENSG00000141232|chr17:50863197-50863198|-/CATGCAGT|frameshift_variant	69.6276240434122	0.14239879520340665	1				NaN	NaN	0	NaN	2318	3297	5615
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5639	20.831	NaN	919.49	30	0	226.24	0.142	+			40682	SVASRRGTH	9	25	485.76427941519	NaN	0	485.7640380859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVASRRGTH_	ENSG00000119669|ENST00000238647|IRF2BPL;IRF2BPL|p.G244Vfs*101|1|0.32|ENSG00000119669|chr14:77027062-77027062|C/-|frameshift_variant;IRF2BPL|p.L713Sfs*54|1|0.54|ENSG00000119669|chr14:77025656-77025656|G/-|frameshift_variant	27.047317107675042	0.34101084205454363	1				NaN	NaN	0	NaN	2331	3306	5638
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5658	20.878	NaN	8485.7	30	0	1925	0.142	+			22448	KTLESAVVK	9	67	487.7968150120732	973.5790770909464	2	487.79754638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTLESAVVK_	ENSG00000106772|ENST00000376718|PRUNE2;ENST00000492157.5_1_9:79438526-79520879:-|nuORF;nc|ENSG00000106772|Q8WUY3-2|PRUNE2;nc|ENSG00000106772|Q8WUY3-3|PRUNE2;nc|ENSG00000106772|Q8WUY3-4|PRUNE2;PRUNE2|p.L2591Qfs*12|1|0.19|ENSG00000106772|chr9:76703839-76703842|CTAA/-|frameshift_variant	73.84112541714126	0.12417958948937492	1				NaN	NaN	0	NaN	2344	3312	5657
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5676	20.917	NaN	12862	30	0	2907.6	0.214	+			21003	KKGRRVTQ	8	77	486.80715053240084	971.5997481316017	2	486.8077697753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KKGRRVTQ_	COL5A1|p.G997Afs*77|1|0.22|ENSG00000130635|chr9:134801983-134801983|C/-|frameshift_variant;COL5A1|p.K933Rfs*141|1|0.32|ENSG00000130635|chr9:134795309-134795309|C/-|frameshift_variant;COL5A1|p.P870Qfs*204|1|0.5|ENSG00000130635|chr9:134786009-134786009|C/-|frameshift_variant;COL5A1|p.P966Lfs*108|1|0.41|ENSG00000130635|chr9:134796895-134796895|C/-|frameshift_variant	84.9155231211612	0.2928622555056503	1				NaN	NaN	0	NaN	2359	3315	5675
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5677	20.921	NaN	16520	30	0	5634.3	0.106				-1	 	0	46	399.23425640637345	796.4539598795469	2	399.23492431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	2360	3315	5675
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5678	20.923	NaN	5193.7	30	0	2602.3	0.038	+			6803	CGFLILQIRC	10	35	389.2127685546875	NaN	0	389.2127685546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_CGFLILQIRC_	ENST00000502964.5_1_17:46971694-46973128:+|nuORF;ENST00000513781.5_1_17:46970480-46973128:+|nuORF	24.20275056022122	0.4201028297492154	1				NaN	NaN	0	NaN	2361	3315	5675
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5691	20.95	NaN	623.36	30	0	112.83	0.144			+	16393	HEPIDVQFV	9	25	542.2752685546875	NaN	0	542.2752685546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HEPIDVQFV_	REV__ENSG00000197021|ENST00000370406|EOLA2;REV__ENSG00000197620|ENST00000393985|EOLA1	35.61828744233558	0.29773779453147337	1				NaN	NaN	0	NaN	2371	3318	5690
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5743	21.066	NaN	4643.7	30	0	2639.6	0.147	+			6006	AVMDNKNPTIK	11	40	410.8887542197486	NaN	0	410.88885498046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVMDNKNPTIK_	CKAP5|p.K1126Rfs*25|1|0.46|ENSG00000175216|chr11:46767609-46767609|T/-|frameshift_variant;CKAP5|p.V1971Lfs*42|1|0.03|ENSG00000175216|chr11:46744211-46744212|-/TTGAAAAAAAG|frameshift_variant;ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5	43.41853373365257	0.36258927961914283	1				NaN	NaN	0	NaN	2414	3327	5742
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5790	21.172	NaN	8294.2	30	0	939.05	0.148	+			34048	RSMEAHNILSK	11	60	429.2270831150325	1284.6594199452975	3	429.22784423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RSMEAHNILSK_	ENSG00000160075|ENST00000291386|SSU72;ENST00000378725.3_1_1:1480120-1509937:-|nuORF;nc|ENSG00000160075|Q9NP77-2|SSU72;SSU72|p.L82Ffs*8|1|0.34|ENSG00000160075|chr1:1544981-1544982|-/A|frameshift_variant	110.63693656944632	0.03869675661758342	1				NaN	NaN	0	NaN	2452	3336	5789
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5806	21.207	NaN	1010.3	30	0	112.4	0.214	+			39240	STAKSLLVK	9	37	473.8002014160156	NaN	0	473.8002014160156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STAKSLLVK_	ENSG00000136715|ENST00000643581|SAP130;nc|ENSG00000136715|Q9H0E3-2|SAP130;nc|ENSG00000136715|Q9H0E3-3|SAP130;nc|ENSG00000136715|Q9H0E3|SAP130	51.19269402634007	0.19847346126499396	1				NaN	NaN	0	NaN	2465	3339	5805
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5807	21.211	NaN	1169.5	30	0	393.22	0.035	+			18906	IVMETGNTK	9	28	496.75843015302337	NaN	0	496.7574462890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IVMETGNTK_	ENSG00000171566|ENST00000499023|PLRG1;ENST00000506918.1_1_4:155463230-155466996:-|nuORF;nc|ENSG00000171566|O43660-2|PLRG1	69.6276240434122	0.10825701912424071	1				NaN	NaN	0	NaN	2466	3339	5805
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5835	21.273	NaN	3283.1	30	0	453.99	0.214	+			37898	SPAEDKSSF	9	57	484.2217547664315	966.428956599663	2	484.2218322753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SPAEDKSSF_	ENSG00000183779|ENST00000331569|ZNF703	141.52041321563706	0.009766778904176347	1				NaN	NaN	0	NaN	2488	3345	5834
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5836	21.276	NaN	3027.9	30	0	873.61	0.106	+			22986	KVSDINISK	9	50	502.2923326218886	1002.5701123105772	2	502.2926025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVSDINISK_	ENSG00000138193|ENST00000371380|PLCE1;PLCE1|p.A1544Pfs*9|1|0.07|ENSG00000138193|chr10:94273681-94273681|A/-|frameshift_variant;PLCE1|p.E2087Gfs*37|1|0.1|ENSG00000138193|chr10:94316672-94316676|AGAAG/-|frameshift_variant;PLCE1|p.P70Dfs*7|1|0.06|ENSG00000138193|chr10:94031253-94031254|-/GA|frameshift_variant;PLCE1|p.P70Lfs*8|1|0.04|ENSG00000138193|chr10:94031254-94031255|-/TAACA|frameshift_variant	128.51354385984777	0.016045873618445866	1				NaN	NaN	0	NaN	2489	3345	5834
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5837	21.278	NaN	2752.9	30	0	776.47	0.036	+			881	AEHIESRTL	9	43	528.2778276389871	1054.5411023447741	2	528.2789916992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEHIESRTL_	ENSG00000147872|ENST00000276914|PLIN2;PLIN2|p.V348*|1|0.15|ENSG00000147872|chr9:19116520-19116520|C/-|frameshift_variant	70.8162118820467	0.13725933411854815	1				NaN	NaN	0	NaN	2490	3345	5834
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5855	21.316	NaN	1606.3	30	0	457.69	0.141	+			32713	RALAAVRE	8	49	443.26687833966827	NaN	0	443.2674865722656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RALAAVRE_	ENSG00000283654|ENST00000637218|CIROP;nc|ENSG00000283654|A0A1B0GTW7-2|CIROP;nc|ENSG00000283654|A0A1B0GTW7-3|CIROP	60.97194046774394	1.7418937515398478	1				NaN	NaN	0	NaN	2505	3348	5854
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5897	21.412	NaN	9052.6	30	0	1600.9	0.215	+			16148	HEAEPVRTL	9	63	526.2802129233689	1050.5458729135378	2	526.2815551757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HEAEPVRTL_	ENSG00000177311|ENST00000321464|ZBTB38	101.25262130126117	0.03792372629710479	1				NaN	NaN	0	NaN	2538	3357	5896
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5898	21.416	NaN	1927.4	30	0	813.28	0.035	+			16987	HPSGTALHY	9	35	491.74029362345385	981.4660343137077	2	491.74066162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HPSGTALHY_	ENSG00000196526|ENST00000420658|AFAP1;ENST00000513842.1_1_4:7765494-7800689:-|nuORF;nc|ENSG00000196526|Q8N556|AFAP1	37.15910966729921	0.4535818937225704	1				NaN	NaN	0	NaN	2539	3357	5896
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5925	21.483	NaN	3606.7	30	0	1313.9	0.142	+			32989	REELLARG	8	54	472.26932285704373	942.5240927808875	2	472.2695007324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_REELLARG_	ENSG00000139626|ENST00000267082|ITGB7;ENST00000549462.1_1_12:53591166-53600997:-|nuORF;nc|ENSG00000139626|P26010-2|ITGB7	79.45101966838831	0.3281480470254892	1				NaN	NaN	0	NaN	2557	3366	5924
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5934	21.505	NaN	1331.9	30	0	385.02	0.142	+			39205	STADGSALVK	10	43	474.7533041626397	947.4920553920795	2	474.75372314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STADGSALVK_	ENSG00000120699|ENST00000389704|EXOSC8;ENST00000464235.5_1_13:37576413-37578626:+|nuORF;ENST00000490537.6_1_13:37574942-37577165:+|nuORF;EXOSC8|p.N162Mfs*9|1|0.25|ENSG00000120699|chr13:37007064-37007064|A/-|frameshift_variant	88.17693792209575	0.14151128060301246	1				NaN	NaN	0	NaN	2563	3369	5933
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5963	21.578	NaN	1335.2	30	0	262.43	0.142	+			22840	KVIDPVTGK	9	33	478.79216365904557	955.5697743848912	2	478.7932434082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVIDPVTGK_	ENSG00000239789|ENST00000285298|MRPS17	42.33807565288922	0.3928346960664841	1				NaN	NaN	0	NaN	2583	3378	5962
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5980	21.615	NaN	11772	30	0	2700	0.153			+	-1	WMHPFWWFEKC	11	56	565.9144062315478	1694.7213892948432	3	565.9168090820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))WMHPFWWFEKC(Carbamidomethyl (C))_	REV__NDST2|p.R380C|1|0.53|ENSG00000166507|chr10:73806767-73806767|G/A|missense_variant	0.37141330420238305	0.902963125519592	1				NaN	NaN	0	NaN	2597	3381	5979
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5995	21.647	NaN	1753.5	30	0	292.17	0.143	+			16424	HESDVKIVA	9	46	499.2684172318175	996.5222815304351	2	499.2704162597656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HESDVKIVA_	ENSG00000165238|ENST00000427277|WNK2;nc|ENSG00000165238|Q9Y3S1-2|WNK2;nc|ENSG00000165238|Q9Y3S1-3|WNK2;nc|ENSG00000165238|Q9Y3S1-4|WNK2;nc|ENSG00000165238|Q9Y3S1|WNK2;WNK2|p.S1424Pfs*5|1|0.34|ENSG00000165238|chr9:93288908-93288908|C/-|frameshift_variant;WNK2|p.T1980Lfs*12|2|0.16|ENSG00000165238|chr9:93297965-93297965|C/-|frameshift_variant	120.8684288430529	0.02067403653475984	1				NaN	NaN	0	NaN	2609	3384	5994
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6060	21.8	NaN	1160.2	30	0	471.46	0.214			+	131	AAGGCQVLV	9	25	409.21494103710563	816.4153291410113	2	409.21539306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAGGCQVLV_	REV__ENSG00000059588|ENST00000040877|TARBP1;REV__TARBP1|p.S411Hfs*12|1|0.06|ENSG00000059588|chr1:234467519-234467519|A/-|frameshift_variant	42.47446043378293	0.39123495718708534	1				NaN	NaN	0	NaN	2659	3399	6059
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6061	21.803	NaN	2381.8	30	0	288.84	0.042			+	-1	QCETQVMHVRH	11	42	480.8862303279789	1439.6368615841368	3	480.88665771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_QC(Carbamidomethyl (C))ETQVM(Oxidation (M))HVRH_	REV__ENSG00000127329|ENST00000334414|PTPRB;REV__nc|ENSG00000127329|P23467-2|PTPRB;REV__nc|ENSG00000127329|P23467-4|PTPRB;REV__nc|ENSG00000127329|P23467|PTPRB	28.5767321226876	0.690044582712672	1				NaN	NaN	0	NaN	2660	3399	6059
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6079	21.84	NaN	2245.2	30	0	679.43	0.142	+			44668	TTGQVVAMK	9	45	467.75476482921164	933.4949767252233	2	468.2568054199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTGQVVAMK_	ENSG00000170312|ENST00000395284|CDK1;ENST00000475504.6_1_10:62539923-62545554:+|nuORF;nc|ENSG00000170312|P06493-2|CDK1	75.04331003522576	0.118981335847003	1				NaN	NaN	0	NaN	2675	3402	6078
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6095	21.875	NaN	10901	30	0	5798.2	0.214	+			16851	HPESERISM	9	57	543.2554932246435	1084.4964335160869	2	543.256591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HPESERISM_	ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1	62.107414245175825	0.1960472003779324	1				NaN	NaN	0	NaN	2688	3405	6094
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6096	21.878	NaN	5413.8	30	0	3368.5	0.106				-1	AICQWERNK	9	32	402.20054465054363	1203.5798045518309	3	402.200927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_AIC(Carbamidomethyl (C))QWERNK_	ENSG00000140526|ENST00000352732|ABHD2	34.172542307311794	0.4838870758800184	1				NaN	NaN	0	NaN	2689	3405	6094
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6097	21.88	NaN	9778.2	30	0	1433.2	0.045				-1	 	0	73	571.9179499550837	1712.7320204654511	3	571.9198608398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	2690	3405	6094
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6113	21.914	NaN	9093.3	30	0	2732.4	0.141	+			3923	ATASPIVAR	9	62	443.2611250173407	884.5076971014814	2	443.2615966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATASPIVAR_	ENSG00000131725|ENST00000254029|WDR44;nc|ENSG00000131725|Q5JSH3-2|WDR44;nc|ENSG00000131725|Q5JSH3-4|WDR44;WDR44|p.N542Mfs*11|2|0.39|ENSG00000131725|chrX:118409575-118409575|A/-|frameshift_variant	125.81401957644128	0.01768009863045738	1				NaN	NaN	0	NaN	2703	3408	6112
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6131	21.953	NaN	1218.7	30	0	298.3	0.143	+			30669	QAVRTQAQD	9	45	508.76251853249556	NaN	0	508.7624816894531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QAVRTQAQD_	nc|ENSG00000233295|A6NIJ5|FAM90A20	74.25504064058377	0.09106938647426577	1				NaN	NaN	0	NaN	2718	3411	6130
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6147	21.987	NaN	1579.9	30	0	589.73	0.214	+			17198	HTYSHSSRR	9	45	565.7782580491236	NaN	0	565.7784423828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HTYSHSSRR_	BEAN1|p.R105H|1|0.36|ENSG00000166546|chr16:66477584-66477584|G/A|missense_variant	35.15202426646627	0.3000918603816441	1				NaN	NaN	0	NaN	2731	3414	6146
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6148	21.991	NaN	571.62	30	0	202.99	0.035	+			12307	GDARDPRIP	9	31	498.7642822265625	NaN	0	498.7642822265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GDARDPRIP_	ENSG00000109956|ENST00000312527|B3GAT1;ENST00000531778.1_1_11:134251834-134254167:-|nuORF;nc|ENSG00000109956|Q9P2W7-2|B3GAT1	29.14955571784316	0.3303970763161698	1				NaN	NaN	0	NaN	2732	3414	6146
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6180	22.061	NaN	4970.2	30	0	2844.6	0.144				-1	TGLSCVYRL	9	37	356.8560979980819	1067.5464645944458	3	357.19140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_TGLSC(Carbamidomethyl (C))VYRL_	ENSG00000196666|ENST00000538490|FAM180B	31.529811441608018	0.5085848003137583	1				NaN	NaN	0	NaN	2758	3420	6179
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6261	22.249	NaN	2251	30	0	553.37	0.142	+			39627	STIDPAVSK	9	36	459.2504656567272	916.4863783802545	2	459.7520751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STIDPAVSK_	ENSG00000106049|ENST00000265395|HIBADH;ENST00000428288.2_1_7:27565835-27702463:-|nuORF	62.107414245175825	0.1960472003779324	1				NaN	NaN	0	NaN	2821	3438	6260
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6291	22.317	NaN	1733.1	30	0	297.89	0.141	+			16560	HFELGGDK	8	45	451.72197537215766	901.4293978111153	2	451.7223815917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HFELGGDK_	ENSG00000165502|ENST00000298289|RPL36AL;ENSG00000241343|ENST00000553110|RPL36A;ENST00000399253.3_1_X:140233088-140233355:+|nuORF	58.78195531508484	0.5138399468736706	1				NaN	NaN	0	NaN	2845	3444	6290
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6397	22.56	NaN	1950.6	30	0	561.42	0.142	+			3520	ASSKLAIMK	9	53	474.7806293303813	947.5467057275627	2	474.78125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASSKLAIMK_	ENSG00000035928|ENST00000349703|RFC1;nc|ENSG00000035928|P35251|RFC1;RFC1|p.N510Mfs*33|1|0.15|ENSG00000035928|chr4:39308992-39308992|T/-|frameshift_variant	72.87924865735499	0.12833875048249987	1				NaN	NaN	0	NaN	2930	3465	6396
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6427	22.628	NaN	1385.8	30	0	345.64	0.143	+			22742	KVCNPIITK	9	42	508.30168202794397	1014.588811122688	2	508.3033752441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVCNPIITK_	ENSG00000109971|ENST00000534624|HSPA8	106.88024417677582	0.032181361622142884	1				NaN	NaN	0	NaN	2954	3471	6426
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6466	22.718	NaN	10702	30	0	1652	0.142	+			16432	HESGASIKI	9	55	471.2557420015971	940.4969310699943	2	471.2562255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HESGASIKI_	ENSG00000165119|ENST00000376263|HNRNPK;HNRNPK|p.R414C|1|0.56|ENSG00000165119|chr9:83970283-83970283|G/A|missense_variant;nc|ENSG00000165119|P61978-3|HNRNPK;nc|ENSG00000165119|P61978|HNRNPK	122.1759843771914	0.019882474861609503	1				NaN	NaN	0	NaN	2984	3480	6465
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6482	22.753	NaN	11884	30	0	4902.9	0.142	+			13829	GQSDIAITK	9	53	466.75553177477065	931.4965106163413	2	466.75592041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GQSDIAITK_	ENSG00000104738|ENST00000649973|MCM4	99.78786539795823	0.03941834715970116	1				NaN	NaN	0	NaN	2997	3483	6481
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6494	22.78	NaN	352.55	30	0	89.444	0.142	+			44085	TPTKTYGM	8	23	449.7207946777344	NaN	0	449.7207946777344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TPTKTYGM_	ENSG00000109814|ENST00000316423|UGDH;UGDH|p.M432Nfs*20|1|0.29|ENSG00000109814|chr4:39503954-39503955|-/T|frameshift_variant;UGDH|p.V371Yfs*6|1|0.34|ENSG00000109814|chr4:39505298-39505298|T/-|frameshift_variant	44.116797842482775	1.7418937515398478	1				NaN	NaN	0	NaN	3006	3486	6493
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6508	22.811	NaN	927.43	30	0	311.9	0.141	+			45401	TVVAAVGPK	9	27	421.2613220214844	NaN	0	421.2613220214844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVVAAVGPK_	ENSG00000198863|ENST00000361677|RUNDC1;ENST00000590836.1_1_17:41132593-41133163:+|nuORF;nc|ENSG00000198863|Q96C34-2|RUNDC1;RUNDC1|p.F530Lfs*9|1|0.11|ENSG00000198863|chr17:42991461-42991461|T/-|frameshift_variant;RUNDC1|p.K513Qfs*16|1|0.27|ENSG00000198863|chr17:42991405-42991406|-/C|frameshift_variant	51.33545320467046	0.19748963086191895	1				NaN	NaN	0	NaN	3017	3489	6507
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6538	22.878	NaN	870.5	30	0	137.35	0.143	+			16047	HAVVIHSDY	9	37	520.7625066630425	NaN	0	520.7628784179688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HAVVIHSDY_	ENSG00000275395|ENST00000616721|FCGBP;FCGBP-ACSS2|1|fusion;FCGBP|p.G150Afs*25|1|0.19|ENSG00000275395|chr19:39927915-39927915|G/-|frameshift_variant;nc|ENSG00000275395|Q9Y6R7|FCGBP	62.97842346883844	0.13661591499337852	1				NaN	NaN	0	NaN	3041	3495	6537
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6556	22.917	NaN	1524.6	30	0	597.1	0.142			+	44448	TSMVVSTAK	9	39	462.2468890680242	NaN	0	462.2472839355469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSMVVSTAK_	REV__ENSG00000158553|ENST00000444565|POM121L2;REV__POM121L2|p.D642Gfs*77|1|0.06|ENSG00000158553|chr6:27310248-27310249|-/TACAATTCCT|frameshift_variant	64.20726635412375	0.13137488984569443	1				NaN	NaN	0	NaN	3056	3498	6555
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6592	23.002	NaN	2744.3	30	0	291.13	0.214	+			48439	VTKNSILK	8	47	451.78723706009157	901.5599211869832	2	452.2891845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTKNSILK_	TET1|p.K775Lfs*23|1|0.07|ENSG00000138336|chr10:68645051-68645052|-/TTAGTTAC|frameshift_variant	56.72105179125745	0.5342425954139568	1				NaN	NaN	0	NaN	3083	3507	6591
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6593	23.006	NaN	2387.5	30	0	806.19	0.032	+			44667	TTGPGSHF	8	32	402.18712139388197	802.359689854564	2	402.1881103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTGPGSHF_	ENSG00000176842|ENST00000394636|IRX5;ENST00000558597.1_2_16:54966274-54967782:+|nuORF;nc|ENSG00000176842|P78411-2|IRX5;nc|ENSG00000176842|P78411-3|IRX5	44.53106598305862	0.628196326904373	1				NaN	NaN	0	NaN	3084	3507	6591
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6616	23.057	NaN	2576.1	30	0	427.09	0.143	+			8507	EATKAVTEM	9	46	490.24138658172484	978.4682202302497	2	490.242431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EATKAVTEM_	ENSG00000070756|ENST00000318607|PABPC1;ENSG00000090621|ENST00000372858|PABPC4;ENSG00000101104|ENST00000217073|PABPC1L;ENSG00000151846|ENST00000281589|PABPC3;ENST00000476056.5_1_20:43550276-43561823:+|nuORF;ENST00000490798.5_1_20:43550276-43564067:+|nuORF;nc|ENSG00000070756|P11940-2|PABPC1;nc|ENSG00000090621|Q13310-2|PABPC4;nc|ENSG00000090621|Q13310|PABPC4;nc|ENSG00000101104|Q4VXU2|PABPC1L	116.90359126533652	0.02307425081617795	1				NaN	NaN	0	NaN	3101	3513	6615
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6653	23.145	NaN	3101.7	30	0	633.4	0.147	+			51467	YVHDDGRVSY	10	50	404.18716555706334	1209.53966727139	3	404.1881103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YVHDDGRVSY_	ENSG00000130755|ENST00000597595|GMFG;ENST00000601731.1_1_19:39819119-39826633:-|nuORF	62.107414245175825	0.3466735403679669	1				NaN	NaN	0	NaN	3129	3522	6652
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6704	23.259	NaN	1192.1	30	0	252.28	0.144	+			15970	HAIMRSPQM	9	34	535.7645563916334	1069.5145598500667	2	535.7658081054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HAIMRSPQM_	CTNNB1|p.L301Hfs*16|1|0.05|ENSG00000168036|chr3:41225827-41225831|TTCAA/-|frameshift_variant;CTNNB1|p.M271Wfs*5|1|0.08|ENSG00000168036|chr3:41225733-41225733|A/-|frameshift_variant;ENSG00000168036|ENST00000349496|CTNNB1	80.45461616416974	0.09558281504443908	1				NaN	NaN	0	NaN	3171	3531	6703
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6721	23.296	NaN	10857	30	0	3924.9	0.214			+	35131	SAHVRLLRG	9	51	336.87326024127776	1007.5979513240334	3	336.87432861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAHVRLLRG_	REV__ENST00000428708.6_1_17:79089831-79089936:+|nuORF	35.61828744233558	0.47037581924408073	1				NaN	NaN	0	NaN	3185	3534	6720
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6722	23.299	NaN	758.8	30	0	91.787	0.035	+			22066	KSKTKWTK	8	33	503.8050246930055	1005.5954964528111	2	503.8066711425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KSKTKWTK_	nc|ENSG00000087274|P35611-2|ADD1;nc|ENSG00000087274|P35611-4|ADD1;nc|ENSG00000087274|P35611|ADD1	45.97224482568171	0.6192535143389125	1				NaN	NaN	0	NaN	3186	3534	6720
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6739	23.334	NaN	1978.5	30	0	542.53	0.142	+			39284	STASAVPLAK	10	42	472.77359022962276	943.5326275260455	2	472.77423095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STASAVPLAK_	ENSG00000134240|ENST00000369406|HMGCS2;HMGCS2|p.I277Sfs*22|1|0.26|ENSG00000134240|chr1:119759139-119759139|T/-|frameshift_variant;nc|ENSG00000134240|P54868-2|HMGCS2;nc|ENSG00000134240|P54868-3|HMGCS2	118.74307786436346	0.029104951601466193	1				NaN	NaN	0	NaN	3200	3537	6738
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6756	23.371	NaN	1306.2	30	0	287.21	0.154				-1	 	0	44	595.5965503492172	1783.7678216478514	3	595.5965576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	3214	3540	6755
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6803	23.476	NaN	4638.1	30	0	391.31	0.143	+			37930	SPEEGARVY	9	63	504.2427305420381	1006.4709081508762	2	504.24371337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SPEEGARVY_	ENSG00000131037|ENST00000201647|EPS8L1;ENST00000587715.1_1_19:55598611-55598979:+|nuORF;ENST00000589362.5_1_19:55593317-55598979:+|nuORF;EPS8L1|p.A674V|1|0.11|ENSG00000131037|chr19:55087371-55087371|C/T|missense_variant;nc|ENSG00000131037|Q8TE68-2|EPS8L1;nc|ENSG00000131037|Q8TE68-4|EPS8L1	118.74307786436346	0.02196067127630568	1				NaN	NaN	0	NaN	3252	3549	6802
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6830	23.545	NaN	1858.5	30	0	531.28	0.146	+			29485	PCSGRVEVKHA	11	36	394.8739154973413	1181.599917092224	3	394.8745422363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PCSGRVEVKHA_	ENSG00000177675|ENST00000313599|CD163L1;nc|ENSG00000177675|Q9NR16-2|CD163L1;nc|ENSG00000177675|Q9NR16-4|CD163L1	43.650786325866115	0.5079891456189096	1				NaN	NaN	0	NaN	3270	3558	6829
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6861	23.621	NaN	6031.1	30	0	1168	0.143	+			40463	STVSADPVVK	10	52	501.77659337088176	1001.5386338085635	2	501.77740478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STVSADPVVK_	ENSG00000136051|ENST00000332180|WASHC4	126.24258497203832	0.01851300475414303	1				NaN	NaN	0	NaN	3292	3567	6860
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6906	23.723	NaN	5514.6	30	0	904.82	0.142	+			33445	RILSGVVTK	9	70	486.8134186968583	971.6122844605167	2	486.8140563964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RILSGVVTK_	ENSG00000142534|ENST00000270625|RPS11	86.88156770896713	0.07365720931774442	1				NaN	NaN	0	NaN	3328	3576	6905
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6931	23.781	NaN	1136.5	30	0	328.65	0.141	+			33985	RSGFLAAR	8	31	439.2533874511719	NaN	0	439.2533874511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RSGFLAAR_	ENSG00000165271|ENST00000297990|NOL6;nc|ENSG00000165271|Q9H6R4-2|NOL6;nc|ENSG00000165271|Q9H6R4-4|NOL6;NOL6|p.Q953Kfs*32|4|0.2|ENSG00000165271|chr9:33464084-33464084|G/-|frameshift_variant	37.15910966729921	1.7418937515398478	1				NaN	NaN	0	NaN	3347	3582	6930
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6949	23.826	NaN	2400	30	0	1287.5	0.142	+			32459	QVLATTVGK	9	41	458.77634241091295	915.5381318886259	2	458.77642822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QVLATTVGK_	ENSG00000121057|ENST00000337714|AKAP1;nc|ENSG00000121057|Q92667-2|AKAP1	39.252832667884924	0.4290233611298554	1				NaN	NaN	0	NaN	3359	3588	6948
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6974	23.894	NaN	1384.2	30	0	315.73	0.143	+			5755	AVGKTSFLR	9	35	489.7901611328125	NaN	0	489.7901611328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVGKTSFLR_	ENSG00000130038|ENST00000440314|CRACR2A	51.19269402634007	0.19847346126499396	1				NaN	NaN	0	NaN	3375	3597	6973
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6990	23.929	NaN	3141.5	30	0	1026.3	0.214	+			26219	LSSKEGLAL	9	39	459.26743155934855	916.5203101854971	2	459.7664489746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSSKEGLAL_	tr|U7SST5|U7SST5_FUSNUHistidineammonia-lyaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=hutHPE=3SV=1	54.776311868738084	0.25715957988447635	1				NaN	NaN	0	NaN	3388	3600	6989
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6991	23.933	NaN	4184.5	30	0	848.6	0.035	+			36852	SIFKQPVTK	9	63	524.313343612708	1046.6121342922158	2	524.3140258789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SIFKQPVTK_	ENSG00000071655|ENST00000434436|MBD3;ENSG00000134046|ENST00000256429|MBD2;ENST00000590830.5_1_19:1578341-1584901:-|nuORF;nc|ENSG00000071655|O95983-2|MBD3	114.85826248499774	0.024312442104607014	1				NaN	NaN	0	NaN	3389	3600	6989
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7014	23.985	NaN	2921.4	30	0	759.81	0.142	+			46913	VIVDSTVGK	9	46	459.26743155934855	916.5203101854971	2	459.7673645019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VIVDSTVGK_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	49.536043120802724	0.308405419312776	1				NaN	NaN	0	NaN	3406	3606	7013
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7049	24.063	NaN	67159	30	0	25574	0.145			+	28534	NILFYNILQ	9	76	379.8816211379102	1136.6230340139307	3	379.8825378417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NILFYNILQ_	REV__tr|U7T3X5|U7T3X5_FUSNUProbableGTP-bindingproteinEngBOS=FusobacteriumnucleatumCTI-5OX=1316586GN=engBPE=3SV=1	63.30626980617807	0.18605348971131092	1				NaN	NaN	0	NaN	3435	3612	7048
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7063	24.094	NaN	1176.4	30	0	228.63	0.143	+			16064	HAYLSKNSL	9	47	516.7759912127119	1031.5374294922237	2	516.77685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HAYLSKNSL_	ENSG00000131236|ENST00000372805|CAP1;ENST00000417455.1_1_10:44100293-44100833:-|nuORF;ENST00000461993.1_1_1:40535258-40537202:+|nuORF;ENST00000476047.1_1_3:76483919-76484456:+|nuORF;ENST00000494114.1_1_1:40536414-40537202:+|nuORF;nc|ENSG00000131236|Q01518-2|CAP1	39.252832667884924	0.4290233611298554	1				NaN	NaN	0	NaN	3446	3615	7062
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7079	24.129	NaN	2914.9	30	0	1126.8	0.142	+			39366	STCSPIISK	9	44	468.246704783139	934.4788566330781	2	468.2466735839844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STCSPIISK_	ENSG00000170606|ENST00000304858|HSPA4;ENST00000514825.1_1_5:132437411-132440125:+|nuORF	132.757866228626	0.013877640931359021	1				NaN	NaN	0	NaN	3459	3618	7078
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7095	24.163	NaN	1093.6	30	0	268.49	0.142			+	-1	SSGQPVTCI	9	33	474.7260406504619	947.4375283677239	2	474.7264099121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SSGQPVTC(Carbamidomethyl (C))I_	REV__SLC39A13|p.Q301Vfs*38|1|0.53|ENSG00000165915|chr11:47414891-47414892|CA/-|frameshift_variant	34.172542307311794	0.4838870758800184	1				NaN	NaN	0	NaN	3472	3621	7094
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7141	24.274	NaN	2789.6	30	0	357.01	0.214	+			42625	TAVEAGRAL	9	43	444.25053140552404	886.4865098778481	2	444.2503662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAVEAGRAL_	ENSG00000032444|ENST00000600737|PNPLA6;nc|ENSG00000032444|Q8IY17-2|PNPLA6;nc|ENSG00000032444|Q8IY17-3|PNPLA6;nc|ENSG00000032444|Q8IY17-5|PNPLA6;nc|ENSG00000032444|Q8IY17|PNPLA6;PNPLA6|p.S1175Pfs*10|1|0.55|ENSG00000032444|chr19:7558944-7558944|G/-|frameshift_variant	80.45461616416974	0.09558281504443908	1				NaN	NaN	0	NaN	3506	3633	7140
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7142	24.277	NaN	2955.1	30	0	1185.5	0.039			+	32084	QSEERGAQSRF	11	44	432.2080078125	NaN	0	432.2080078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QSEERGAQSRF_	REV__ENST00000582081.5_1_17:62576965-62577022:-|nuORF	45.908116695636124	0.34470816508309304	1				NaN	NaN	0	NaN	3507	3633	7140
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7172	24.343	NaN	4745	30	0	3513.6	0.138	+			45776	VAGAVVGA	8	21	322.19253732931617	642.3705217254324	2	322.19378662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VAGAVVGA_	ENSG00000157036|ENST00000287675|EXOG;ENST00000489813.1_1_3:38537858-38539466:+|nuORF;EXOG|p.A31D|1|0.1|ENSG00000157036|chr3:38496459-38496459|C/A|missense_variant;nc|ENSG00000157036|Q9Y2C4-4|EXOG	10.184766708764876	0.7843118145031319	1				NaN	NaN	0	NaN	3531	3639	7171
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7182	24.366	NaN	2207.7	30	0	325.3	0.142	+			3578	ASVETGFAK	9	53	455.23732032449743	908.4600877157949	2	455.2375793457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASVETGFAK_	ENSG00000042286|ENST00000307864|AIFM2;nc|ENSG00000042286|Q9BRQ8-2|AIFM2	129.42129120953632	0.01549634589885217	1				NaN	NaN	0	NaN	3538	3642	7181
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7229	24.472	NaN	1196.6	30	0	292.36	0.214	+			46285	VEIAKQSV	8	31	437.2559053994475	NaN	0	437.255859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VEIAKQSV_	ENSG00000113558|ENST00000353411|SKP1;ENST00000506450.1_1_4:25624416-25624897:+|nuORF;nc|ENSG00000113558|P63208-2|SKP1	65.46538089061403	1.7418937515398478	1				NaN	NaN	0	NaN	3576	3651	7228
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7230	24.475	NaN	619.62	30	0	71.242	0.034	+			11644	FQHVGKAF	8	31	467.2500904960782	932.4856280589564	2	467.2500305175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FQHVGKAF_	ENSG00000254772|ENST00000329251|EEF1G;ENST00000526409.5_1_11:62327153-62342310:-|nuORF;nc|ENSG00000254772|P26641-2|EEF1G;NCEH1-EEF1G|1|fusion	55.50420428727701	0.5462892107279674	1				NaN	NaN	0	NaN	3577	3651	7228
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7292	24.614	NaN	2500.1	30	0	400.4	0.214	+			34104	RSQLVLVTK	9	54	522.3318038583736	1042.6490547835472	2	522.3331909179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RSQLVLVTK_	ENSG00000138496|ENST00000682323|PARP9;nc|ENSG00000138496|Q8IXQ6-3|PARP9;nc|ENSG00000138496|Q8IXQ6|PARP9;PARP9|p.T633Pfs*5|2|0.22|ENSG00000138496|chr3:122537047-122537047|T/-|frameshift_variant	99.01295224348159	0.040209060045561164	1				NaN	NaN	0	NaN	3627	3663	7291
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7293	24.618	NaN	3519.9	30	0	926.56	0.033	+			23526	LAHVGPRL	8	36	431.7657689046807	861.5169848761615	2	431.7666931152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LAHVGPRL_	ENSG00000132207|ENST00000251303|SLX1A;ENSG00000181625|ENST00000330181|SLX1B;ENST00000565219.1_1_16:29466524-29469442:+|nuORF	44.53106598305862	0.628196326904373	1				NaN	NaN	0	NaN	3628	3663	7291
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7355	24.756	NaN	18318	30	0	5479.2	0.142				-1	 	0	59	473.78136916960017	945.5481854060004	2	473.78228759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	3678	3675	7354
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7372	24.792	NaN	3827.3	30	0	1056.2	0.214	+			44370	TSLAFPLCQ	9	50	490.2498830458489	978.4852131584978	2	490.25054931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSLAFPLCQ_	nc|ENSG00000131037|Q8TE68-3|EPS8L1	55.50420428727701	0.2510918378945873	1				NaN	NaN	0	NaN	3692	3678	7371
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7373	24.796	NaN	4527.6	30	0	1231.4	0.106			+	22088	KSLVEKPQ	8	63	464.776462118451	NaN	0	464.7766418457031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KSLVEKPQ_	REV__ENST00000394295.5_1_2:70008659-70015252:+|nuORF	74.25504064058377	1.7418937515398478	1				NaN	NaN	0	NaN	3693	3678	7371
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7374	24.798	NaN	4122.9	30	0	885.48	0.034	+			2641	AQITATIAK	9	47	458.77616954167684	915.5377861501537	2	458.7760925292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AQITATIAK_	ENSG00000011566|ENST00000263881|MAP4K3;MAP4K3|p.R261Kfs*5|1|0.41|ENSG00000011566|chr2:39325755-39325756|-/T|frameshift_variant;nc|ENSG00000011566|Q8IVH8-2|MAP4K3;nc|ENSG00000011566|Q8IVH8-3|MAP4K3	88.17693792209575	0.07000514020414955	1				NaN	NaN	0	NaN	3694	3678	7371
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7401	24.858	NaN	863.13	30	0	280.31	0.141	+			35935	SEGKAYSL	8	35	427.7160755009511	NaN	0	427.71612548828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEGKAYSL_	ENSG00000180198|ENST00000683442|RCC1;nc|ENSG00000180198|P18754-2|RCC1;RCC1|p.R320W|1|0.47|ENSG00000180198|chr1:28536767-28536767|C/T|missense_variant	66.42927471994793	1.7418937515398478	1				NaN	NaN	0	NaN	3715	3684	7400
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7427	24.917	NaN	10125	30	0	2893.6	0.214	+			44757	TTNDIVISK	9	65	495.7764582932068	989.5383636532137	2	495.77740478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTNDIVISK_	ENSG00000113141|ENST00000417647|IK	183.72194652814687	0.000922403277147814	1				NaN	NaN	0	NaN	3735	3690	7426
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7428	24.921	NaN	2454.7	30	0	1028	0.106				-1	PKALTSKDM	9	41	503.7642078296449	NaN	0	503.7643737792969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_PKALTSKDM(Oxidation (M))_	ENSG00000107104|ENST00000382297|KANK1;nc|ENSG00000107104|Q14678-2|KANK1	67.49366992349736	0.1173583512313808	1				NaN	NaN	0	NaN	3736	3690	7426
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7429	24.923	NaN	6649	30	0	1642.1	0.039	+			44682	TTIEEDKSVLK	11	50	421.56552003575354	1261.6747307074606	3	421.56610107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TTIEEDKSVLK_	ENSG00000183576|ENST00000331768|SETD3	32.75053402867276	0.6462648045997152	1				NaN	NaN	0	NaN	3737	3690	7426
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7445	24.956	NaN	1368.5	30	0	221.03	0.143	+			16182	HEAPGTFRV	9	34	507.2616600001019	1012.5087670670039	2	507.2617492675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HEAPGTFRV_	ENSG00000163840|ENST00000296161|DTX3L;nc|ENSG00000163840|Q8TDB6-2|DTX3L	47.657333605630114	0.33044192980041115	1				NaN	NaN	0	NaN	3750	3693	7444
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7458	24.986	NaN	5505.1	30	0	1613.7	0.214	+			39200	STAAVGVLK	9	55	423.2580385842459	844.5015242352919	2	423.25823974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STAAVGVLK_	ENSG00000081019|ENST00000261441|RSBN1;ENST00000476412.5_1_1:114308604-114340019:-|nuORF	125.81401957644128	0.01768009863045738	1				NaN	NaN	0	NaN	3760	3696	7457
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7459	24.989	NaN	1083.3	30	0	336.78	0.033	+			48826	VVASPIAAR	9	30	442.2721836940411	NaN	0	442.27203369140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVASPIAAR_	ENSG00000184363|ENST00000331563|PKP3;nc|ENSG00000184363|Q9Y446-2|PKP3	82.24051045832904	0.06370642293906256	1				NaN	NaN	0	NaN	3761	3696	7457
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7475	25.022	NaN	3521	30	0	789.63	0.143	+			16023	HATIVSEKL	9	58	499.2870531237825	996.5595533143651	2	499.28765869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HATIVSEKL_	ENSG00000144063|ENST00000272462|MALL;ENST00000568189.5_1_2:111003217-111043255:+|nuORF	79.48907831485694	0.09975780661107167	1				NaN	NaN	0	NaN	3774	3699	7474
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7488	25.051	NaN	1840.3	30	0	879.58	0.142	+			28539	NILVTSGGTV	10	36	480.7714808085478	959.5284086838956	2	480.772216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NILVTSGGTV_	ENSG00000135446|ENST00000257904|CDK4;ENST00000551706.1_1_12:58144639-58145133:-|nuORF;nc|ENSG00000135446|P11802-2|CDK4	56.72105179125745	0.3956618550748046	1				NaN	NaN	0	NaN	3784	3702	7487
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7547	25.185	NaN	3923.6	30	0	1102.7	0.142	+			41477	SVNSTVLVK	9	51	473.78158380721203	945.5486146812241	2	473.7822570800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVNSTVLVK_	ENSG00000160593|ENST00000356289|JAML;nc|ENSG00000160593|Q86YT9-2|JAML;nc|ENSG00000160593|Q86YT9-4|JAML	96.0336014099291	0.047854655524928534	1				NaN	NaN	0	NaN	3831	3714	7546
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7565	25.224	NaN	7824.2	30	0	3204.8	0.214	+			26874	LWKIFPVISDF	11	40	455.59206345282496	1363.7543609586749	3	455.9267272949219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LWKIFPVISDF_	ENST00000554399.1_1_14:52907387-53019203:-|nuORF	15.333111300571575	0.7986936308376149	1				NaN	NaN	0	NaN	3846	3717	7564
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7566	25.227	NaN	629.73	30	0	228.04	0.035	+			45190	TVNFLTGQL	9	23	496.77397356931056	NaN	0	496.7736511230469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVNFLTGQL_	ENSG00000187097|ENST00000334696|ENTPD5	24.519189625965996	0.35377483217337163	1				NaN	NaN	0	NaN	3847	3717	7564
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7652	25.432	NaN	2032.7	30	0	977.89	0.142	+			31757	QPFGGGSHM	9	37	459.20017024159677	916.3857875499936	2	459.20013427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QPFGGGSHM_	ENSG00000077150|ENST00000661543|NFKB2;ENST00000336486.5_1_10:104157832-104159780:+|nuORF;ENST00000467116.5_1_10:104155716-104158713:+|nuORF;nc|ENSG00000077150|Q00653-3|NFKB2;nc|ENSG00000077150|Q00653-4|NFKB2	40.5726180659479	0.4135428067754104	1				NaN	NaN	0	NaN	3912	3738	7651
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7724	25.614	NaN	2462.3	30	0	1157.5	0.14	+			48973	VVGGLAVGK	9	27	400.2549442625335	798.495335591867	2	400.2557067871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVGGLAVGK_	ENSG00000103249|ENST00000382745|CLCN7;ENST00000563822.1_1_16:1505719-1509320:-|nuORF;ENST00000564968.1_1_16:1507514-1509320:-|nuORF;nc|ENSG00000103249|P51798-2|CLCN7;RBCK1-CLCN7|1|fusion;RBCK1-CLCN7|2|fusion	73.97473282117947	0.12360187025703594	1				NaN	NaN	0	NaN	3963	3759	7723
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7738	25.647	NaN	2995.7	30	0	853.41	0.142	+			41847	SVSTVLTSK	9	41	461.26596388898844	920.5173748447769	2	461.26666259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSTVLTSK_	ENSG00000188536|ENST00000251595|HBA2;ENSG00000206172|ENST00000320868|HBA1;HBA1|p.A131T|1|0.07|ENSG00000206172|chr16:177373-177373|G/A|missense_variant	70.8162118820467	0.13725933411854815	1				NaN	NaN	0	NaN	3974	3762	7737
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7750	25.674	NaN	4149.5	30	0	1462.3	0.144				-1	 	0	36	348.2159164697464	1041.6259200094391	3	348.21722412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	3983	3765	7749
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7780	25.742	NaN	4981.7	30	0	2557.3	0.214	+			28531	NIIRYHLT	8	33	515.2959612628022	1028.5773695924042	2	515.2969970703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NIIRYHLT_	POSTN|p.L564R|1|0.07|ENSG00000133110|chr13:37579329-37579329|A/C|missense_variant	33.51558372728122	0.7005509609380386	1				NaN	NaN	0	NaN	4007	3771	7779
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7781	25.746	NaN	2073	30	0	460.5	0.045	+			33281	RGLCAAPREE	10	44	551.2800799496828	NaN	0	550.9443359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RGLCAAPREE_	CDK5RAP2|p.E454Kfs*11|2|0.31|ENSG00000136861|chr9:120491430-120491433|TCTT/-|frameshift_variant;CDK5RAP2|p.L1409*|1|0.2|ENSG00000136861|chr9:120415111-120415111|A/-|frameshift_variant;CDK5RAP2|p.N746Kfs*10|1|0.2|ENSG00000136861|chr9:120458587-120458588|-/T|frameshift_variant;CDK5RAP2|p.P1012Lfs*62|1|0.27|ENSG00000136861|chr9:120443733-120443733|G/-|frameshift_variant;ENSG00000136861|ENST00000349780|CDK5RAP2;ENST00000483412.5_1_9:123170580-123298708:-|nuORF;nc|ENSG00000136861|Q96SN8-2|CDK5RAP2;nc|ENSG00000136861|Q96SN8-3|CDK5RAP2;nc|ENSG00000136861|Q96SN8-4|CDK5RAP2	25.57405402267927	0.4162033004763879	1				NaN	NaN	0	NaN	4008	3771	7779
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7874	26.06	NaN	1650.4	30	0	319.27	0.142	+			38146	SQAFPSVSK	9	46	475.75053243043317	NaN	0	475.750732421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SQAFPSVSK_	ENSG00000095637|ENST00000371247|SORBS1;ENST00000474353.6_1_10:97106208-97250794:-|nuORF;nc|ENSG00000095637|Q9BX66-10|SORBS1;nc|ENSG00000095637|Q9BX66-11|SORBS1;nc|ENSG00000095637|Q9BX66-12|SORBS1;nc|ENSG00000095637|Q9BX66-2|SORBS1;nc|ENSG00000095637|Q9BX66-3|SORBS1;nc|ENSG00000095637|Q9BX66-4|SORBS1;nc|ENSG00000095637|Q9BX66-5|SORBS1;nc|ENSG00000095637|Q9BX66-6|SORBS1;nc|ENSG00000095637|Q9BX66-7|SORBS1;nc|ENSG00000095637|Q9BX66-8|SORBS1;nc|ENSG00000095637|Q9BX66-9|SORBS1;SORBS1|p.A1135Qfs*17|1|0.24|ENSG00000095637|chr10:95336757-95336757|C/-|frameshift_variant	38.753607047826485	0.28190821760017076	1				NaN	NaN	0	NaN	4080	3792	7873
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7895	26.112	NaN	7891.7	30	0	1502.7	0.142	+			8164	EAAKVGEVY	9	51	483.25002414733893	964.4854953614779	2	483.2510070800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EAAKVGEVY_	ENSG00000131941|ENST00000254260|RHPN2;nc|ENSG00000131941|Q8IUC4-2|RHPN2;nc|ENSG00000258628|A8MT19|RHPN2P1	143.8867514904718	0.008656634767784652	1				NaN	NaN	0	NaN	4095	3798	7894
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7928	26.192	NaN	1640.1	30	0	543.29	0.143	+			22163	KSSDFAVLK	9	43	497.7817487613931	993.5489445895862	2	497.78240966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSSDFAVLK_	ENSG00000103047|ENST00000261778|TANGO6	70.8162118820467	0.13725933411854815	1				NaN	NaN	0	NaN	4119	3807	7927
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7954	26.253	NaN	3909.8	30	0	1143.1	0.146	+			2732	AQYQFTGIKK	10	38	395.2199539786867	1182.6380325362602	3	395.22088623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AQYQFTGIKK_	ENSG00000173915|ENST00000369815|ATP5MK	29.550750289552195	0.6385079145554603	1				NaN	NaN	0	NaN	4139	3813	7953
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7971	26.29	NaN	1579	30	0	748.36	0.214	+			31046	QEVVDGKVV	9	33	486.7718625073451	NaN	0	486.7719421386719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QEVVDGKVV_	CON__P35900;ENSG00000171431|ENST00000167588|KRT20;KRT20|p.V404M|1|0.22|ENSG00000171431|chr17:40876426-40876426|C/T|missense_variant	28.081489160057373	0.33578952234132536	1				NaN	NaN	0	NaN	4153	3816	7970
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7972	26.294	NaN	1164.8	30	0	479.92	0.106	+			16857	HPFEDGAKL	9	34	507.25673307624	NaN	0	507.2574157714844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HPFEDGAKL_	ENSG00000178950|ENST00000314167|GAK;ENST00000504435.1_1_4:882633-887812:-|nuORF;GAK|p.L730*|1|0.09|ENSG00000178950|chr4:870772-870772|C/-|frameshift_variant;GAK|p.P1133Lfs*23|1|0.3|ENSG00000178950|chr4:851860-851860|G/-|frameshift_variant;GAK|p.P955Lfs*36|1|0.25|ENSG00000178950|chr4:866964-866964|G/-|frameshift_variant;GAK|p.S905Pfs*40|1|0.15|ENSG00000178950|chr4:867116-867116|G/-|frameshift_variant;GAK|p.V881Gfs*39|1|0.23|ENSG00000178950|chr4:867186-867187|-/C|frameshift_variant;nc|ENSG00000178950|O14976-2|GAK	40.77816245573522	0.2702456086868081	1				NaN	NaN	0	NaN	4154	3816	7970
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7973	26.296	NaN	2401.6	30	0	593.25	0.034	+			27045	MAAAAFAEK	9	43	455.2282586231598	908.4419643131196	2	455.228271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MAAAAFAEK_	ENSG00000101166|ENST00000355937|PRELID3B;nc|ENSG00000101166|Q9Y3B1-2|PRELID3B	98.62937762414208	0.04060045538121712	1				NaN	NaN	0	NaN	4155	3816	7970
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8001	26.358	NaN	6933.5	30	0	5243.2	0.214	+			46620	VGAAAAAL	8	31	322.192605211007	642.370657488814	2	322.19384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VGAAAAAL_	ENST00000380516.6_1_15:59225768-59225834:-|nuORF	10.184766708764876	0.7843118145031319	1				NaN	NaN	0	NaN	4177	3822	8000
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8002	26.362	NaN	3656	30	0	1431.6	0.106			+	33579	RLLALLCW	8	29	329.8659753956475	NaN	0	329.8659973144531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RLLALLCW_	REV__ENST00000431422.1_1_6:134758921-134824003:+|nuORF	10.184766708764876	1.7418937515398478	1				NaN	NaN	0	NaN	4178	3822	8000
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8003	26.364	NaN	1745.7	30	0	182.16	0.036	+			49468	VVYFVAMVY	9	49	545.7850952148438	NaN	0	545.7850952148438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVYFVAMVY_	ENSG00000118160|ENST00000236877|SLC8A2;SLC8A2|p.A229Gfs*3|1|0.16|ENSG00000118160|chr19:47457584-47457584|G/-|frameshift_variant;SLC8A2|p.S220Pfs*12|6|0.28|ENSG00000118160|chr19:47465746-47465746|A/-|frameshift_variant	39.021493756699265	0.2805557132942146	1				NaN	NaN	0	NaN	4179	3822	8000
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8013	26.386	NaN	2528.1	30	0	668.45	0.214	+			43148	TESPVRTL	8	42	451.7504840660962	901.4864151989924	2	451.7505187988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TESPVRTL_	ENSG00000134285|ENST00000550765|FKBP11;ENST00000551694.5_1_12:49318004-49319277:-|nuORF;ENST00000553027.1_1_12:49319073-49319295:-|nuORF;nc|ENSG00000134285|Q9NYL4-2|FKBP11	64.20726635412375	0.4601301477144759	1				NaN	NaN	0	NaN	4186	3825	8012
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8014	26.389	NaN	1637.4	30	0	777.72	0.035			+	30354	PVAESLGAEL	10	38	493.26302474372557	984.5114965542512	2	493.26446533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PVAESLGAEL_	REV__ENSG00000104059|ENST00000261275|ENTREP2;REV__nc|ENSG00000104059|O60320-2|ENTREP2	27.882242232435846	0.6521336255503853	1				NaN	NaN	0	NaN	4187	3825	8012
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8055	26.482	NaN	1272.2	30	0	407.14	0.141	+			25360	LPGAGLPHS	9	36	424.7345757477062	847.4545985622124	2	424.7348327636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LPGAGLPHS_	ENST00000360737.4_1_22:46493806-46505887:+|nuORF	57.81127852772723	0.2318599694398087	1				NaN	NaN	0	NaN	4219	3834	8054
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8066	26.507	NaN	1620.3	30	0	931.57	0.138	+			213	AALQTQPSLG	10	29	329.18322927668845	NaN	0	329.1834716796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AALQTQPSLG_	ENST00000581021.5_1_18:23669934-23670096:-|nuORF	16.006774744331256	0.4201028297492154	1				NaN	NaN	0	NaN	4227	3837	8065
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8075	26.529	NaN	2060	30	0	653.17	0.215	+			37000	SIPINSLGM	9	37	466.24946045416823	930.4843679751365	2	466.24981689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIPINSLGM_	ENST00000457761.6_1_2:172803236-172821866:+|nuORF;ENST00000494601.5_1_2:172803236-172809427:+|nuORF;HAT1|p.R49Ffs*26|1|0.04|ENSG00000128708|chr2:171946738-171946739|-/ATTCC|frameshift_variant	27.882242232435846	0.5426732730940306	1				NaN	NaN	0	NaN	4233	3840	8074
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8076	26.533	NaN	699.93	30	0	98.817	0.036	+			8967	EFIKEKSAT	9	44	526.7832494252888	1051.5519459173775	2	526.784423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EFIKEKSAT_	ENSG00000165506|ENST00000298292|DNAAF2;nc|ENSG00000165506|Q9NVR5-2|DNAAF2	40.77816245573522	0.41113185337114944	1				NaN	NaN	0	NaN	4234	3840	8074
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8169	26.749	NaN	1700.4	30	0	224.15	0.143	+			27524	MPADTNKAF	9	52	497.7361979407067	993.4578429482134	2	497.7373962402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MPADTNKAF_	ENSG00000125037|ENST00000245046|EMC3;ENST00000487465.5_1_3:10011273-10028351:-|nuORF;nc|ENSG00000125037|Q9P0I2-2|EMC3	95.81516180277367	0.04847050768394289	1				NaN	NaN	0	NaN	4306	3861	8168
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8233	26.907	NaN	6269.6	30	0	1531.9	0.143	+			34264	RTIAPIIGR	9	74	498.8188703052819	995.6231876773638	2	498.820068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTIAPIIGR_	CDC5L|p.K219Sfs*24|1|0.25|ENSG00000096401|chr6:44403919-44403919|A/-|frameshift_variant;CDC5L|p.K271Nfs*4|1|0.18|ENSG00000096401|chr6:44406376-44406377|-/C|frameshift_variant;CDC5L|p.Q359Cfs*22|1|0.06|ENSG00000096401|chr6:44408614-44408615|-/TG|frameshift_variant;CDC5L|p.Y225Mfs*18|1|0.1|ENSG00000096401|chr6:44403938-44403938|T/-|frameshift_variant;ENSG00000096401|ENST00000371477|CDC5L	79.71258880314673	0.09879134589249085	1				NaN	NaN	0	NaN	4352	3879	8232
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8313	27.095	NaN	5030.5	30	0	293.36	0.144	+			16129	HEADKTYML	9	65	554.2597556397335	1106.504958346267	2	554.2615966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HEADKTYML_	ENSG00000143155|ENST00000367833|TIPRL	82.7504851949679	0.08565546331141553	1				NaN	NaN	0	NaN	4414	3897	8312
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8326	27.124	NaN	2535.2	30	0	226.22	0.144			+	22414	KTKKSTDRT	9	57	532.808111232331	1063.601669531462	2	532.8104858398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTKKSTDRT_	REV__ENSG00000171320|ENST00000305188|ESCO2;REV__nc|ENSG00000171320|Q56NI9-2|ESCO2	39.252832667884924	0.4290233611298554	1				NaN	NaN	0	NaN	4424	3900	8325
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8349	27.179	NaN	3409.2	30	0	549.93	0.151	+			50064	WFLVEKHWYKQ	11	44	521.9426971295698	1562.8062619889092	3	521.9437866210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WFLVEKHWYKQ_	ENSG00000102226|ENST00000377107|USP11;nc|ENSG00000102226|P51784|USP11;USP11|p.D655Gfs*2|1|0.34|ENSG00000102226|chrX:47244537-47244538|-/G|frameshift_variant;USP11|p.L617Sfs*19|1|0.06|ENSG00000102226|chrX:47243528-47243528|C/-|frameshift_variant	10.10389549528425	0.8231785578855622	1				NaN	NaN	0	NaN	4441	3906	8348
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8363	27.21	NaN	1218.5	30	0	191.87	0.141	+			35193	SAISSPLTK	9	32	452.2604794825264	NaN	0	452.2603759765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAISSPLTK_	AKAP13|p.S1688C|1|0.06|ENSG00000170776|chr15:85669792-85669792|C/G|missense_variant;AKAP13|p.T2400Nfs*3|1|0.33|ENSG00000170776|chr15:85730617-85730618|-/C|frameshift_variant;ENSG00000170776|ENST00000394518|AKAP13;nc|ENSG00000170776|Q12802-2|AKAP13;nc|ENSG00000170776|Q12802-4|AKAP13	65.46538089061403	0.1260090208616529	1				NaN	NaN	0	NaN	4452	3909	8362
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8372	27.232	NaN	11033	30	0	7952.8	0.138			+	228	AALVSPGA	8	29	343.19772854740495	684.3809041616099	2	343.19891357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AALVSPGA_	REV__nc|ENSG00000223519|B7ZC32|KIF28P	16.704963439144045	0.7946246187734944	1				NaN	NaN	0	NaN	4458	3912	8371
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8451	27.431	NaN	2037.7	30	0	820.51	0.143	+			16777	HPAAKMIVM	9	37	499.26881609294804	996.5230792526961	2	499.26959228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HPAAKMIVM_	ENSG00000156261|ENST00000286788|CCT8;ENST00000484403.5_1_21:30439206-30445917:-|nuORF;nc|ENSG00000156261|P50990-2|CCT8;nc|ENSG00000156261|P50990-3|CCT8	25.450171626174864	0.5654022654467333	1				NaN	NaN	0	NaN	4513	3936	8450
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8468	27.467	NaN	4581.6	30	0	1383.7	0.143			+	32899	RDRELSLQ	8	65	508.77922334396715	1015.5438937547343	2	508.7809143066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RDRELSLQ_	REV__ENSG00000070601|ENST00000377765|FRMPD1;REV__FRMPD1|p.N1120Mfs*38|1|0.42|ENSG00000070601|chr9:37745387-37745387|A/-|frameshift_variant;REV__FRMPD1|p.V1442Lfs*35|1|0.23|ENSG00000070601|chr9:37746351-37746351|G/-|frameshift_variant	60.11826168202944	0.5006107059937851	1				NaN	NaN	0	NaN	4527	3939	8467
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8482	27.498	NaN	4311.8	30	0	913.42	0.143	+			37155	SIVKESILK	9	61	508.8211186744361	1015.6276844156722	2	508.8216857910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIVKESILK_	ENST00000436367.5_1_6:16658088-16761588:-|nuORF	96.0336014099291	0.047854655524928534	1				NaN	NaN	0	NaN	4538	3942	8481
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8497	27.531	NaN	2185	30	0	475.6	0.214	+			17223	HVITKTMEL	9	57	536.2967702269525	1070.578987520705	2	536.2982788085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HVITKTMEL_	ENSG00000153201|ENST00000283195|RANBP2;RANBP2|p.F3068Lfs*10|1|0.06|ENSG00000153201|chr2:108782692-108782692|T/-|frameshift_variant;RANBP2|p.H3114Sfs*18|1|0.33|ENSG00000153201|chr2:108782827-108782828|-/T|frameshift_variant	79.71258880314673	0.09879134589249085	1				NaN	NaN	0	NaN	4550	3945	8496
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8498	27.535	NaN	3194.5	30	0	1256.9	0.034	+			7293	DASALPPPVG	10	35	462.24496803762923	922.4753831420585	2	462.2455139160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DASALPPPVG_	ENSG00000174282|ENST00000380599|ZBTB4;ZBTB4|p.G686Afs*53|1|0.55|ENSG00000174282|chr17:7462925-7462925|C/-|frameshift_variant	55.50420428727701	0.4067289358710215	1				NaN	NaN	0	NaN	4551	3945	8496
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8531	27.613	NaN	1569.4	30	0	586.5	0.142	+			45177	TVMNGALVK	9	36	466.7646962213971	931.5148395095943	2	466.76483154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVMNGALVK_	ENSG00000131389|ENST00000622186|SLC6A6;SLC6A6|p.R601H|1|0.36|ENSG00000131389|chr3:14484946-14484946|G/A|missense_variant	35.61828744233558	0.47037581924408073	1				NaN	NaN	0	NaN	4575	3954	8530
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8543	27.64	NaN	3001.3	30	0	1198.7	0.214	+			39871	STLPKSLLK	9	40	329.54638776861105	NaN	0	329.5462951660156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STLPKSLLK_	CKAP5|p.K1126Rfs*25|1|0.46|ENSG00000175216|chr11:46767609-46767609|T/-|frameshift_variant;CKAP5|p.V1971Lfs*42|1|0.03|ENSG00000175216|chr11:46744211-46744212|-/TTGAAAAAAAG|frameshift_variant;ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5	56.43379154798735	0.16452882468284893	1				NaN	NaN	0	NaN	4584	3957	8542
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8544	27.644	NaN	643.24	30	0	88.753	0.036	+			34469	RVAETIFVK	9	31	531.8184404083382	1061.6223278834764	2	531.8189086914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RVAETIFVK_	ENSG00000107954|ENST00000369780|NEURL1;nc|ENSG00000107954|O76050-2|NEURL1	49.536043120802724	0.308405419312776	1				NaN	NaN	0	NaN	4585	3957	8542
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8562	27.681	NaN	1568.7	30	0	406.16	0.214	+			26014	LSLAAQEL	8	39	422.7424207581728	NaN	0	422.74261474609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSLAAQEL_	ENSG00000188897|ENST00000696174|unknown	64.20726635412375	1.7418937515398478	1				NaN	NaN	0	NaN	4600	3960	8561
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8563	27.684	NaN	570.26	30	0	64.369	0.034	+			37678	SLRVSLIGAG	10	33	486.79487316620595	NaN	0	486.7949523925781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLRVSLIGAG_	ENST00000567143.1_1_16:58438532-58438703:+|nuORF	60.11826168202944	0.2333124524861241	1				NaN	NaN	0	NaN	4601	3960	8561
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8692	27.987	NaN	2459.4	30	0	750.58	0.142	+			42475	TAMSSVLAK	9	47	454.2494248116378	906.4842966900757	2	454.24981689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAMSSVLAK_	ENSG00000107581|ENST00000369144|EIF3A;nc|ENSG00000107581|Q14152-2|EIF3A	63.53385203322761	0.18415635464017938	1				NaN	NaN	0	NaN	4700	3990	8691
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8723	28.064	NaN	1023.7	30	0	312.73	0.14			+	3269	ASLPAKLQ	8	27	414.2531123817034	NaN	0	414.2537536621094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASLPAKLQ_	REV__ENSG00000243708|ENST00000458483|PLA2G4B;REV__ENST00000487292.1_3_15:42132349-42136005:+|nuORF;REV__ENST00000490848.5_1_15:42132349-42134687:+|nuORF;REV__ENST00000491746.5_1_15:42132349-42135875:+|nuORF;REV__nc|ENSG00000243708|P0C869-6|PLA2G4B;REV__nc|ENSG00000243708|P0C869-7|PLA2G4B;REV__nc|ENSG00000243708|P0C869-8|PLA2G4B	55.50420428727701	1.7418937515398478	1				NaN	NaN	0	NaN	4722	3999	8722
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8746	28.118	NaN	1196.7	30	0	216.02	0.142	+			28048	NAAQTSVAY	9	43	462.72486464535365	NaN	0	462.7245178222656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAAQTSVAY_	ENSG00000113643|ENST00000231572|RARS1;nc|ENSG00000113643|P54136-2|RARS1	74.25504064058377	0.09106938647426577	1				NaN	NaN	0	NaN	4739	4005	8745
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8762	28.153	NaN	2698.9	30	0	664.52	0.142	+			40544	SVAAPITVR	9	34	457.27686534226916	912.5391777513383	2	457.27703857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVAAPITVR_	ENSG00000170242|ENST00000527733|USP47;nc|ENSG00000170242|Q96K76-2|USP47;nc|ENSG00000170242|Q96K76|USP47;USP47|p.G1121Efs*22|2|0.29|ENSG00000170242|chr11:11948505-11948505|A/-|frameshift_variant	44.377184641726394	0.36891676396732553	1				NaN	NaN	0	NaN	4752	4008	8761
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8803	28.247	NaN	2057.9	30	0	136.35	0.142	+			43937	TPASAGHVW	9	52	463.22991059815365	NaN	0	463.23046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TPASAGHVW_	ENSG00000125398|ENST00000245479|SOX9;SOX9|p.A379Gfs*5|1|0.71|ENSG00000125398|chr17:72123990-72123991|-/GG|frameshift_variant;SOX9|p.E388*|1|0.21|ENSG00000125398|chr17:72124012-72124054|GAGCAGCGAGCCGGGCCAGTCCCAGCGAACGCACATCAAGACG/-|frameshift_variant;SOX9|p.F423Sfs*47|1|0.36|ENSG00000125398|chr17:72124124-72124124|T/-|frameshift_variant;SOX9|p.G390Rfs*14|1|0.67|ENSG00000125398|chr17:72124021-72124022|-/CC|frameshift_variant;SOX9|p.H396Rfs*8|1|0.11|ENSG00000125398|chr17:72124040-72124041|-/CG|frameshift_variant;SOX9|p.H413Lfs*58|1|0.37|ENSG00000125398|chr17:72124094-72124095|-/TG|frameshift_variant;SOX9|p.I435Sfs*35|1|0.25|ENSG00000125398|chr17:72124157-72124157|C/-|frameshift_variant;SOX9|p.P374Rfs*9|1|0.38|ENSG00000125398|chr17:72123974-72123974|C/-|frameshift_variant;SOX9|p.Q416Nfs*54|1|0.48|ENSG00000125398|chr17:72124100-72124100|C/-|frameshift_variant;SOX9|p.S408Tfs*64|1|0.62|ENSG00000125398|chr17:72124072-72124073|-/CACTA|frameshift_variant;SOX9|p.S448*|1|0.34|ENSG00000125398|chr17:72124200-72124201|CC/-|frameshift_variant	97.47269410471826	0.026532356238405514	1				NaN	NaN	0	NaN	4784	4017	8802
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8871	28.406	NaN	1441.6	30	0	348.64	0.143	+			16027	HATTALLHY	9	40	513.771400288386	1025.5282476435718	2	513.7725830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HATTALLHY_	ENSG00000160563|ENST00000292035|MED27;ENST00000514280.1_1_5:79646842-79647379:-|nuORF;nc|ENSG00000160563|Q6P2C8-2|MED27	65.80317337860623	0.1652391959156183	1				NaN	NaN	0	NaN	4837	4032	8870
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8897	28.466	NaN	3111	30	0	1558	0.142	+			32334	QTVAVGVIK	9	41	457.7872086775021	913.5598644218043	2	457.7873229980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QTVAVGVIK_	ENSG00000101210|ENST00000217182|EEF1A2;ENSG00000156508|ENST00000309268|EEF1A1;ENST00000417549.1_1_13:28789725-28790031:+|nuORF;ENST00000436459.2_1_9:135895553-135896258:+|nuORF;ENST00000513637.1_1_5:43495177-43495438:-|nuORF;ENST00000567658.1_1_16:27144806-27145163:-|nuORF;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	32.81241826257853	0.4965981579233955	1				NaN	NaN	0	NaN	4857	4038	8896
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8937	28.576	NaN	2108.2	30	0	708.66	0.141	+			43564	TIAPALVSK	9	36	450.281554118272	898.5485553033441	2	450.2821044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TIAPALVSK_	ENO1|p.D318Mfs*5|1|0.43|ENSG00000074800|chr1:8864006-8864006|C/-|frameshift_variant;ENSG00000074800|ENST00000234590|ENO1;ENST00000464920.1_1_1:8921421-8930582:-|nuORF	42.396135135203025	0.392153681582562	1				NaN	NaN	0	NaN	4882	4053	8936
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8946	28.598	NaN	443.17	30	0	93.141	0.214	+			23724	LAVESQAP	8	20	407.71868896484375	NaN	0	407.71868896484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LAVESQAP_	ENST00000489226.5_1_9:130485405-130489873:+|nuORF	50.0245360154114	1.7418937515398478	1				NaN	NaN	0	NaN	4888	4056	8945
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8947	28.602	NaN	1287.8	30	0	453.3	0.034	+			19363	KALEAVFGK	9	44	481.7869246225516	961.5592963119033	2	481.7870788574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KALEAVFGK_	ENSG00000147274|ENST00000320676|RBMX;ENST00000565907.1_1_X:135961433-135961586:-|nuORF;ENST00000567262.5_1_X:135958813-135961586:-|nuORF;nc|ENSG00000147274|P38159-2|RBMX;nc|ENSG00000147274|P38159-3|RBMX	93.5975768576971	0.05472259948179787	1				NaN	NaN	0	NaN	4889	4056	8945
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8987	28.707	NaN	2635.3	30	0	417.18	0.141	+			23801	LCNPKSVL	8	51	437.24676728795737	NaN	0	437.2464599609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LCNPKSVL_	ENSG00000155792|ENST00000286234|DEPTOR;nc|ENSG00000155792|Q8TB45-2|DEPTOR	52.29916861842294	1.7418937515398478	1				NaN	NaN	0	NaN	4914	4071	8986
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9005	28.752	NaN	4319.5	30	0	504.58	0.141	+			36030	SEIQALTL	8	57	437.74766837753384	873.4807838218677	2	437.7480773925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEIQALTL_	ENSG00000003509|ENST00000002125|NDUFAF7;ENST00000474154.5_1_2:37458848-37468954:+|nuORF	90.36981228632155	0.27635063874291205	1				NaN	NaN	0	NaN	4926	4077	9004
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9090	28.948	NaN	1106.4	30	0	183.86	0.141	+			41536	SVQAVLVGK	9	40	450.7796325683594	NaN	0	450.7796325683594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVQAVLVGK_	ENSG00000005810|ENST00000544440|MYCBP2;MYCBP2|p.C1064Ifs*31|1|0.09|ENSG00000005810|chr13:77211267-77211279|TTATCAGAAGGCA/-|frameshift_variant;MYCBP2|p.G651Efs*24|1|0.04|ENSG00000005810|chr13:77257781-77257782|-/ATTAGTTTTT|frameshift_variant;MYCBP2|p.K375Sfs*4|1|0.3|ENSG00000005810|chr13:77270014-77270014|T/-|frameshift_variant;MYCBP2|p.N1867Tfs*9|1|0.15|ENSG00000005810|chr13:77171572-77171572|T/-|frameshift_variant;MYCBP2|p.N3049*|1|0.11|ENSG00000005810|chr13:77097894-77097895|TT/-|frameshift_variant;MYCBP2|p.P4047Qfs*26|2|0.35|ENSG00000005810|chr13:77067782-77067782|G/-|frameshift_variant;MYCBP2|p.T1507Ffs*24|1|0.04|ENSG00000005810|chr13:77185189-77185190|-/TTGTAAA|frameshift_variant;MYCBP2|p.T4311Pfs*37|1|0.14|ENSG00000005810|chr13:77059619-77059619|G/-|frameshift_variant;MYCBP2|p.V3749*|1|0.12|ENSG00000005810|chr13:77081486-77081486|C/-|frameshift_variant;nc|ENSG00000005810|O75592-2|MYCBP2	104.0567914643314	0.015064339666778382	1				NaN	NaN	0	NaN	4993	4095	9089
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9190	29.192	NaN	13078	30	0	4470.5	0.142				-1	 	0	62	453.2682430349154	904.5219331366308	2	453.2689208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	5066	4122	9189
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9221	29.268	NaN	3212.4	30	0	853.44	0.143	+			4188	ATFPDPNVK	9	37	494.7578439370846	987.5011349409692	2	494.7582702636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATFPDPNVK_	ENSG00000158773|ENST00000368021|USF1;ENST00000491629.5_1_1:161011414-161013065:-|nuORF;ENST00000529476.1_1_1:161011414-161013065:-|nuORF;USF1|p.G130Vfs*33|3|0.3|ENSG00000158773|chr1:161041734-161041734|C/-|frameshift_variant	60.11826168202944	0.21262886028301267	1				NaN	NaN	0	NaN	5088	4131	9220
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9268	29.387	NaN	1690.6	30	0	650.96	0.143	+			47436	VPTDEARAF	9	37	503.2526927000853	1004.4908324669706	2	503.2530517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VPTDEARAF_	ENSG00000103769|ENST00000261890|RAB11A;ENSG00000185236|ENST00000328024|RAB11B;nc|ENSG00000103769|P62491-2|RAB11A;nc|ENSG00000185236|Q15907-2|RAB11B	110.11987700582712	0.028875675806141952	1				NaN	NaN	0	NaN	5120	4146	9267
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9461	29.867	NaN	10953	30	0	3897.5	0.147	+			4911	ATQKVNLNQIP	11	39	409.2343437153828	1224.6812017463485	3	409.23541259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATQKVNLNQIP_	ENSG00000123178|ENST00000361840|SPRYD7;nc|ENSG00000123178|Q5W111-2|SPRYD7	27.64392233501311	0.6998289966465058	1				NaN	NaN	0	NaN	5259	4200	9460
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9500	29.958	NaN	2830.5	30	0	661.7	0.142	+			17605	IEGKVVSSL	9	53	466.27650955190535	930.5384661706107	2	466.2766418457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IEGKVVSSL_	ENSG00000132688|ENST00000368223|NES;NES|p.A1050Pfs*14|1|0.36|ENSG00000132688|chr1:156671040-156671040|C/-|frameshift_variant;NES|p.P1439Qfs*11|1|0.19|ENSG00000132688|chr1:156669874-156669874|C/-|frameshift_variant;NES|p.V1249Cfs*11|1|0.37|ENSG00000132688|chr1:156670443-156670443|C/-|frameshift_variant	109.47833844074708	0.029530294723441826	1				NaN	NaN	0	NaN	5289	4209	9499
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9560	30.108	NaN	3934.1	30	0	710.7	0.15				-1	EKDKKIFNHCF	11	49	489.24710852223785	1464.7194961669136	3	489.5823059082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_EKDKKIFNHC(Carbamidomethyl (C))F_	ENSG00000115956|ENST00000234313|PLEK;PLEK|p.N260Tfs*4|1|0.07|ENSG00000115956|chr2:68393174-68393174|A/-|frameshift_variant	29.550750289552195	0.6798279264880025	1				NaN	NaN	0	NaN	5331	4227	9559
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9638	30.291	NaN	2243.9	30	0	237.64	0.143	+			2508	APVEVTHNF	9	65	507.2556502404814	1012.4967475477628	2	507.2560729980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_APVEVTHNF_	ENSG00000005007|ENST00000262803|UPF1;nc|ENSG00000005007|Q92900|UPF1	82.7504851949679	0.08565546331141553	1				NaN	NaN	0	NaN	5391	4245	9637
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9652	30.322	NaN	4360.1	30	0	1905.6	0.144			+	31935	QQPVEELVH	9	36	539.7789716572863	1077.5433903813725	2	539.7799682617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QQPVEELVH_	REV__ENST00000455821.1_1_3:193975097-193975331:+|nuORF	17.364965105453717	0.6112419832031293	1				NaN	NaN	0	NaN	5402	4248	9651
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9664	30.349	NaN	8852.9	30	0	3281.9	0.214	+			32380	QVAPVANSY	9	54	474.7426610924649	947.4707692517298	2	474.7432861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QVAPVANSY_	ENSG00000157557|ENST00000360938|ETS2	107.00750918261382	0.032051501805654005	1				NaN	NaN	0	NaN	5411	4251	9663
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9665	30.353	NaN	1919.4	30	0	912.86	0.106			+	-1	PKPLLCMV	8	35	458.753112960968	NaN	0	458.75311279296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_PKPLLCM(Oxidation (M))V_	REV__ENSG00000133958|ENST00000695012|UNC79;REV__nc|ENSG00000133958|Q9P2D8-2|UNC79;REV__nc|ENSG00000133958|Q9P2D8-3|UNC79;REV__nc|ENSG00000133958|Q9P2D8|UNC79;REV__UNC79|p.E1772Rfs*6|1|0.14|ENSG00000133958|chr14:93622543-93622543|G/-|frameshift_variant;REV__UNC79|p.F2181Lfs*10|2|0.33|ENSG00000133958|chr14:93655372-93655372|T/-|frameshift_variant;REV__UNC79|p.G845Dfs*34|1|0.23|ENSG00000133958|chr14:93580243-93580243|G/-|frameshift_variant;REV__UNC79|p.H1937Pfs*2|1|0.36|ENSG00000133958|chr14:93634607-93634608|-/C|frameshift_variant;REV__UNC79|p.K1493Sfs*12|1|0.52|ENSG00000133958|chr14:93621704-93621704|A/-|frameshift_variant;REV__UNC79|p.K1620Nfs*23|1|0.44|ENSG00000133958|chr14:93622089-93622089|A/-|frameshift_variant;REV__UNC79|p.M1332Cfs*31|1|0.31|ENSG00000133958|chr14:93613031-93613031|A/-|frameshift_variant	23.036711822280957	1.7418937515398478	1				NaN	NaN	0	NaN	5412	4251	9663
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9666	30.355	NaN	1446.8	30	0	634.45	0.034	+			28502	NHLAAELY	8	41	465.7369497825512	NaN	0	465.7361755371094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NHLAAELY_	ENSG00000082898|ENST00000401558|XPO1;ENST00000428210.5_1_2:61720980-61752425:-|nuORF	47.91560031466742	1.7418937515398478	1				NaN	NaN	0	NaN	5413	4251	9663
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9675	30.375	NaN	4566.1	30	0	771.81	0.214	+			42862	TEGKVGYEL	9	66	498.2553604815427	994.4961680298854	2	498.2556457519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEGKVGYEL_	ENSG00000105618|ENST00000321030|PRPF31;ENST00000466404.5_1_19:54621832-54631576:+|nuORF;nc|ENSG00000105618|Q8WWY3-2|PRPF31;nc|ENSG00000105618|Q8WWY3-3|PRPF31;nc|ENSG00000105618|Q8WWY3-4|PRPF31	37.50817390946774	0.44948750990682723	1				NaN	NaN	0	NaN	5419	4254	9674
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9676	30.379	NaN	1622	30	0	729.04	0.035			+	-1	FTLPHPCR	8	40	514.2614648072488	1026.5083766812975	2	514.2626342773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_FTLPHPC(Carbamidomethyl (C))R_	REV__ENSG00000130985|ENST00000335972|UBA1;REV__nc|ENSG00000130985|P22314-2|UBA1	31.954861631926434	0.7126016770032289	1				NaN	NaN	0	NaN	5420	4254	9674
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9685	30.399	NaN	6475.8	30	0	927.09	0.143	+			16013	HASDRIIAL	9	67	498.2848355998467	994.5551182664934	2	498.28570556640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HASDRIIAL_	ENSG00000163931|ENST00000462138|TKT;ENST00000460343.5_1_3:53261754-53265639:-|nuORF;ENST00000461139.5_1_3:53259774-53265639:-|nuORF;ENST00000469678.1_1_3:53259917-53265542:-|nuORF;nc|ENSG00000163931|P29401-2|TKT	70.8162118820467	0.13725933411854815	1				NaN	NaN	0	NaN	5426	4257	9684
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9693	30.419	NaN	1309.9	30	0	225.51	0.143				-1	PLLCLHFL	8	56	506.7878299561681	NaN	0	506.7881164550781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_PLLC(Carbamidomethyl (C))LHFL_	ENST00000596939.1_1_19:58233432-58238846:-|nuORF	43.626045697637714	1.7418937515398478	1				NaN	NaN	0	NaN	5431	4260	9692
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9725	30.499	NaN	8477.1	30	0	2407.4	0.214	+			34886	SAAAALVLK	9	49	422.26789900090125	842.5212450686025	2	422.2688293457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAAAALVLK_	ENSG00000137076|ENST00000314888|TLN1;nc|ENSG00000137076|Q9Y490-2|TLN1;TLN1|p.P1628Rfs*20|1|0.44|ENSG00000137076|chr9:35707144-35707144|G/-|frameshift_variant	161.89823264540465	0.004149850016316161	1				NaN	NaN	0	NaN	5454	4269	9724
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9726	30.502	NaN	1182.6	30	0	226.07	0.035	+			34543	RVLDALVAR	9	46	506.8175703251471	NaN	0	506.8178405761719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RVLDALVAR_	ENSG00000181029|ENST00000596148|TRAPPC5	76.16968421966216	0.08450868013726211	1				NaN	NaN	0	NaN	5455	4269	9724
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9743	30.537	NaN	9363.5	30	0	3706.5	0.214	+			45772	VAGAEIPS	8	29	372.20069445294314	742.3868359726863	2	372.20147705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VAGAEIPS_	ENSG00000143341|ENST00000271588|HMCN1;HMCN1|p.G3718Afs*6|1|0.04|ENSG00000143341|chr1:186113995-186113995|G/-|frameshift_variant;HMCN1|p.L3491Hfs*10|1|0.12|ENSG00000143341|chr1:186095419-186095420|-/ATAT|frameshift_variant;HMCN1|p.S4801Rfs*11|1|0.07|ENSG00000143341|chr1:186145536-186145537|-/AGAATAA|frameshift_variant;nc|ENSG00000143341|Q96RW7-2|HMCN1	29.841539824830324	0.7289191502596711	1				NaN	NaN	0	NaN	5469	4272	9742
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9744	30.541	NaN	2884	30	0	1124	0.037			+	17040	HPWAVAWPSL	10	39	582.3058879072074	NaN	0	582.305908203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HPWAVAWPSL_	REV__ENST00000243776.10_1_2:220403755-220404097:-|nuORF	23.04248740728303	0.42010282974921537	1				NaN	NaN	0	NaN	5470	4272	9742
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9758	30.57	NaN	2046.7	30	0	539.29	0.142	+			44409	TSLPSAICK	9	31	460.24903299903974	918.4835130648795	2	460.24920654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSLPSAICK_	ENSG00000177731|ENST00000327031|FLII;ENST00000578101.5_1_17:18148454-18160363:-|nuORF;FLII|p.K628Rfs*27|1|0.37|ENSG00000177731|chr17:18249178-18249178|T/-|frameshift_variant;FLII|p.S470Afs*32|1|0.36|ENSG00000177731|chr17:18251454-18251454|G/-|frameshift_variant;nc|ENSG00000177731|Q13045-2|FLII;nc|ENSG00000177731|Q13045-3|FLII	37.81151784470057	0.4459294069877048	1				NaN	NaN	0	NaN	5481	4275	9757
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9807	30.702	NaN	25712	30	0	10234	0.145				-1	SLMVPLLFGV	10	42	364.5438943506971	1090.6098536522913	3	364.54522705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_SLM(Oxidation (M))VPLLFGV_	ENST00000306917.4_1_15:68570981-68582015:+|nuORF	28.081489160057373	0.6505064946289502	1				NaN	NaN	0	NaN	5512	4293	9806
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9816	30.724	NaN	11045	30	0	4197.9	0.141				-1	 	0	64	446.2554231336682	890.4962933341365	2	446.25579833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	5518	4296	9815
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9824	30.744	NaN	2399.6	30	0	438.84	0.214	+			43982	TPGGTRIIY	9	54	489.2738345453839	976.5331161575679	2	489.2744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TPGGTRIIY_	ENSG00000148730|ENST00000373218|EIF4EBP2;ENSG00000187840|ENST00000338825|EIF4EBP1;ENSG00000243056|ENST00000310331|EIF4EBP3	54.722347961057174	0.257609425301511	1				NaN	NaN	0	NaN	5523	4299	9823
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9825	30.748	NaN	1629	30	0	220.39	0.036				-1	 	0	55	546.3128689959332	1090.6111850586663	2	546.3141479492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	5524	4299	9823
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9834	30.768	NaN	810.53	30	0	265.35	0.214				-1	 	0	24	315.2072763716563	628.3999998101126	2	315.2083740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	5530	4302	9833
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9835	30.771	NaN	1773.4	30	0	149.47	0.106	+			17827	IFDGRVVAK	9	46	502.79714968806576	1003.5797464429315	2	502.7976989746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IFDGRVVAK_	ENSG00000143183|ENST00000367881|TMCO1;nc|ENSG00000143183|Q9UM00-2|TMCO1;nc|ENSG00000143183|Q9UM00|TMCO1	85.86182877749512	0.07653218437724067	1				NaN	NaN	0	NaN	5531	4302	9833
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9836	30.773	NaN	1468	30	0	268.48	0.106			+	39851	STLLSGAALS	10	40	460.2574515959948	918.5003502587896	2	460.25726318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STLLSGAALS_	REV__ENST00000430430.5_1_8:81398575-81399061:+|nuORF	47.657333605630114	0.47858658696240314	1				NaN	NaN	0	NaN	5532	4302	9833
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9837	30.775	NaN	1003.6	30	0	374.21	0.036	+			25850	LSESELLAVL	10	25	358.54072258718685	1072.6003383617606	3	358.54150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSESELLAVL_	ENST00000429694.1_1:144604445-144614919:+|nuORF	21.9598887501803	0.7004979571547932	1				NaN	NaN	0	NaN	5533	4302	9833
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9850	30.802	NaN	1071	30	0	192.35	0.139	+			20636	KGGNIGAK	8	31	372.72085309254965	743.4271532518993	2	372.721435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KGGNIGAK_	ENSG00000133835|ENST00000510025|HSD17B4;ENST00000442060.7_1_5:118862877-118877689:+|nuORF;ENST00000515235.6_1_5:118829562-118961685:+|nuORF;HSD17B4|p.L703Ifs*15|1|0.06|ENSG00000133835|chr5:119536530-119536531|-/GAAAAATA|frameshift_variant;nc|ENSG00000133835|P51659-2|HSD17B4;nc|ENSG00000133835|P51659-3|HSD17B4	40.5726180659479	0.6527593143185008	1				NaN	NaN	0	NaN	5543	4305	9849
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9899	30.926	NaN	3200.1	30	0	1145.2	0.142	+			45312	TVSELVISK	9	46	488.2892711590111	974.5639893848222	2	488.28955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVSELVISK_	ENSG00000189180|ENST00000432900|ZNF33A;ENSG00000196693|ENST00000359467|ZNF33B;nc|ENSG00000189180|Q06730-3|ZNF33A;nc|ENSG00000189180|Q06730|ZNF33A;ZNF33A|p.E689Rfs*83|1|0.35|ENSG00000189180|chr10:38056188-38056188|G/-|frameshift_variant;ZNF33A|p.Y580Cfs*21|1|0.05|ENSG00000189180|chr10:38055865-38055866|-/GTGTGTGTTCTCTG|frameshift_variant	90.60085204095205	0.06317133949006545	1				NaN	NaN	0	NaN	5577	4320	9898
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9907	30.946	NaN	1349.3	30	0	226.55	0.143	+			48753	VTVQEMVTK	9	48	517.7809964379695	1033.547439942739	2	517.7825927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTVQEMVTK_	ENSG00000137076|ENST00000314888|TLN1;ENST00000486788.2_1_9:35704327-35706084:-|nuORF;nc|ENSG00000137076|Q9Y490-2|TLN1	83.6470233535746	0.08277643980271215	1				NaN	NaN	0	NaN	5582	4323	9906
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9924	30.991	NaN	2431.9	30	0	1570.1	0.139				-1	 	0	29	372.2009293912604	742.3873058493208	2	372.201904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	5593	4329	9923
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9946	31.044	NaN	13782	30	0	9128.6	0.145				-1	SLMVPLLFGV	10	35	364.5438943506971	1090.6098536522913	3	364.5451965332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_SLM(Oxidation (M))VPLLFGV_	ENST00000306917.4_1_15:68570981-68582015:+|nuORF	35.15202426646627	0.5927656479315102	1				NaN	NaN	0	NaN	5609	4335	9945
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9957	31.069	NaN	1354.7	30	0	203.76	0.142	+			2500	APSVVKVSY	9	48	475.27126328660074	948.5279736400015	2	475.27178955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_APSVVKVSY_	ENSG00000127616|ENST00000344626|SMARCA4;ENST00000592604.5_1_19:11123597-11172489:+|nuORF;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;nc|ENSG00000127616|P51532-5|SMARCA4;SMARCA4|p.G1136Afs*4|1|0.27|ENSG00000127616|chr19:11030751-11030751|G/-|frameshift_variant;SMARCA4|p.P1453Lfs*10|1|0.31|ENSG00000127616|chr19:11041491-11041491|C/-|frameshift_variant	70.8162118820467	0.13725933411854815	1				NaN	NaN	0	NaN	5617	4338	9956
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9967	31.093	NaN	5114.7	30	0	3375.2	0.214			+	445	AAVGLSGP	8	33	336.19007286543297	670.365592797666	2	336.19134521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAVGLSGP_	REV__HERVH-int_dup3527|chrX:4542813-4545870:-|8.094520876636611|0.0139942278604804|9.18|476.0|109|2|anti-sense	29.841539824830324	0.7289191502596711	1				NaN	NaN	0	NaN	5624	4341	9966
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9968	31.096	NaN	1512.1	30	0	554.91	0.031			+	-1	RVCLQFLL	8	15	350.2066191974428	NaN	0	350.2067565917969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_RVC(Carbamidomethyl (C))LQFLL_	REV__nc|ENSG00000163882|P52434-4|POLR2H	18.324413293986947	1.7418937515398478	1				NaN	NaN	0	NaN	5625	4341	9966
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10021	31.225	NaN	2012.6	30	0	366.12	0.214	+			47934	VSMDYAISK	9	49	507.251984477589	1012.4894160219781	2	507.2529602050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSMDYAISK_	ENSG00000196453|ENST00000247930|ZNF777;ZNF777|p.P504Rfs*5|1|0.44|ENSG00000196453|chr7:149432761-149432761|G/-|frameshift_variant	109.47833844074708	0.029530294723441826	1				NaN	NaN	0	NaN	5663	4356	10020
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10022	31.229	NaN	2135.1	30	0	249.21	0.034	+			16106	HDLVIKSL	8	46	462.77960829142086	NaN	0	462.7798156738281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HDLVIKSL_	ENSG00000100342|ENST00000397278|APOL1;nc|ENSG00000100342|O14791-2|APOL1;nc|ENSG00000100342|O14791-3|APOL1	90.36981228632155	1.7418937515398478	1				NaN	NaN	0	NaN	5664	4356	10020
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10035	31.256	NaN	2059.1	30	0	1219.9	0.143	+			27228	MEKPVSWI	8	21	495.26074109993834	988.5069292666767	2	495.2619323730469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MEKPVSWI_	ENST00000256078.8_1_12:25380255-25380318:-|nuORF	18.324413293986947	0.7971860551947066	1				NaN	NaN	0	NaN	5674	4359	10034
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10051	31.298	NaN	1261.4	30	0	737.7	0.142	+			26981	LYLVPCTL	8	23	461.2612399304033	920.5079269276066	2	461.26116943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LYLVPCTL_	ENSG00000005206|ENST00000613503|SPPL2B;ENSG00000138600|ENST00000261854|SPPL2A;ENST00000589515.2_1_19:2343134-2351610:+|nuORF;nc|ENSG00000005206|Q8TCT7-4|SPPL2B	21.70233525837049	0.7917639344264583	1				NaN	NaN	0	NaN	5684	4365	10050
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10142	31.535	NaN	1666.5	30	0	407.24	0.141	+			18811	ITVGDIGPK	9	35	450.2631560306693	898.5117591281386	2	450.2635192871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ITVGDIGPK_	ACOX1|p.N501Tfs*6|1|0.47|ENSG00000161533|chr17:75949577-75949577|T/-|frameshift_variant;ENSG00000161533|ENST00000293217|ACOX1;nc|ENSG00000161533|Q15067-3|ACOX1;nc|ENSG00000161533|Q15067|ACOX1	79.71258880314673	0.09879134589249085	1				NaN	NaN	0	NaN	5745	4395	10141
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10256	31.846	NaN	2494.9	30	0	420.09	0.142	+			36658	SGMDVTIVK	9	53	475.2546149165966	948.4946768999932	2	475.2550964355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SGMDVTIVK_	ENSG00000006530|ENST00000649286|AGK;ENST00000465241.5_1_7:141255266-141315366:+|nuORF	93.5975768576971	0.05472259948179787	1				NaN	NaN	0	NaN	5817	4437	10255
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10286	31.92	NaN	1138.9	30	0	347.66	0.142	+			27940	MVGKTFTY	8	28	473.73837256209566	945.4621921909913	2	473.7389221191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MVGKTFTY_	CYP51A1|p.L333Wfs*13|1|0.15|ENSG00000001630|chr7:92123208-92123208|A/-|frameshift_variant;ENSG00000001630|ENST00000003100|CYP51A1;ENST00000419457.1_1_13:29297642-29297861:-|nuORF;nc|ENSG00000001630|Q16850-2|CYP51A1	24.20275056022122	0.7724576178584145	1				NaN	NaN	0	NaN	5838	4446	10285
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10356	32.098	NaN	5199	30	0	2852.2	0.145	+			20733	KGTITFSTTR	10	46	371.2087766859148	1110.6045006579445	3	371.20947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KGTITFSTTR_	ENSG00000165164|ENST00000378653|CFAP47	41.080066990542036	0.5391928043837881	1				NaN	NaN	0	NaN	5887	4467	10355
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10366	32.121	NaN	1618.6	30	0	369.3	0.142			+	35731	SDPPVPAQL	9	46	462.24508484651057	NaN	0	462.2452392578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SDPPVPAQL_	REV__ENSG00000163346|ENST00000368463|PBXIP1;REV__nc|ENSG00000163346|Q96AQ6-2|PBXIP1;REV__nc|ENSG00000163346|Q96AQ6-3|PBXIP1	60.97194046774394	0.14517358171632622	1				NaN	NaN	0	NaN	5894	4470	10365
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10387	32.172	NaN	1731.6	30	0	1051	0.145			+	-1	KEQFRHLL	8	29	371.54449462890625	NaN	0	371.54449462890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))KEQFRHLL_	REV__ENST00000426519.1_1_1:166445250-166445304:-|nuORF	17.364965105453717	1.7418937515398478	1				NaN	NaN	0	NaN	5909	4476	10386
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10462	32.372	NaN	1036.8	30	0	131.81	0.214	+			11482	FPAAPAPKM	9	41	465.2498779296875	NaN	0	465.2498779296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FPAAPAPKM_	ENSG00000163694|ENST00000295971|RBM47;ENST00000510871.5_1_4:40427923-40438677:-|nuORF;nc|ENSG00000163694|A0AV96-2|RBM47	63.30626980617807	0.13521764763214936	1				NaN	NaN	0	NaN	5957	4503	10461
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10463	32.375	NaN	879.38	30	0	184.3	0.106	+			12584	GEHGLIIRV	9	36	497.2960205078125	NaN	0	497.2960205078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEHGLIIRV_	ENSG00000078618|ENST00000352171|NRDC;nc|ENSG00000078618|O43847-2|NRDC	49.536043120802724	0.20989033510253738	1				NaN	NaN	0	NaN	5958	4503	10461
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10464	32.377	NaN	1622.2	30	0	323.3	0.034	+			10978	FEEASNQL	8	47	469.21673702998464	NaN	0	469.2169494628906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FEEASNQL_	ENSG00000079246|ENST00000392132|XRCC5	68.78682469695295	1.7418937515398478	1				NaN	NaN	0	NaN	5959	4503	10461
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10492	32.446	NaN	1259.4	30	0	325.49	0.142	+			18275	IPIKNVEM	8	40	472.2675440998171	NaN	0	472.2669677734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IPIKNVEM_	ENSG00000089472|ENST00000343002|HEPH;nc|ENSG00000089472|Q9BQS7-2|HEPH;nc|ENSG00000089472|Q9BQS7-3|HEPH;nc|ENSG00000089472|Q9BQS7-4|HEPH	47.657333605630114	1.7418937515398478	1				NaN	NaN	0	NaN	5978	4512	10491
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10540	32.58	NaN	2605.7	30	0	542.6	0.142	+			31840	QPSTIATSM	9	49	468.2283406893936	934.4421284455872	2	468.2286071777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QPSTIATSM_	ENSG00000242372|ENST00000374450|EIF6;nc|ENSG00000242372|P56537-2|EIF6	93.19546047674547	0.05585629608842056	1				NaN	NaN	0	NaN	6008	4530	10539
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10619	32.781	NaN	7523.6	30	0	1882.9	0.142	+			44827	TTSVITIVK	9	59	481.29976206084797	960.584971188496	2	481.3000793457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTSVITIVK_	ENSG00000198517|ENST00000343242|MAFK	154.1183686248401	0.005909203230691971	1				NaN	NaN	0	NaN	6063	4554	10618
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10775	33.198	NaN	2613.4	30	0	739.06	0.141	+			36728	SGVSLAALK	9	50	423.25751465481903	844.5004763764381	2	423.25775146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SGVSLAALK_	ENSG00000124575|ENST00000244534|H1-3;ENSG00000168298|ENST00000304218|H1-4;ENSG00000187837|ENST00000343677|H1-2	127.46168284122857	0.016682644177004526	1				NaN	NaN	0	NaN	6165	4608	10774
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10786	33.224	NaN	1977.2	30	0	678.76	0.142	+			28510	NIAEALVSK	9	37	472.77363969247716	943.5327264517543	2	472.7742614746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NIAEALVSK_	ENSG00000197157|ENST00000354725|SND1;GAS2L3-SND1|1|fusion;SND1|p.A514Qfs*156|1|0.37|ENSG00000197157|chr7:127929195-127929195|A/-|frameshift_variant	93.5975768576971	0.05472259948179787	1				NaN	NaN	0	NaN	6173	4611	10785
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10798	33.251	NaN	2350.5	30	0	816.35	0.146	+			4922	ATQMVRMILK	10	33	397.5623759435306	1189.6652984307918	3	397.5629577636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATQMVRMILK_	ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5	35.15202426646627	0.5927656479315102	1				NaN	NaN	0	NaN	6182	4614	10797
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10806	33.272	NaN	5065.6	30	0	2210.1	0.143				-1	 	0	51	492.3151448970473	982.6157368608946	2	492.8177185058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	6187	4617	10805
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10814	33.293	NaN	2058.8	30	0	706.2	0.142	+			37358	SLFGSPVAK	9	24	453.2577460558574	904.5009391785148	2	453.2577819824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLFGSPVAK_	ENSG00000186260|ENST00000571589|MRTFB;nc|ENSG00000186260|Q9ULH7-4|MRTFB;nc|ENSG00000186260|Q9ULH7|MRTFB	52.936696900407355	0.27249468807391813	1				NaN	NaN	0	NaN	6192	4620	10813
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10829	33.336	NaN	2584.2	30	0	340.13	0.214			+	21121	KKSFSIKK	8	57	483.3114407165285	NaN	0	483.3109436035156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KKSFSIKK_	REV__ENSG00000163629|ENST00000411767|PTPN13;REV__nc|ENSG00000163629|Q12923-2|PTPN13;REV__nc|ENSG00000163629|Q12923-3|PTPN13;REV__nc|ENSG00000163629|Q12923-4|PTPN13;REV__PTPN13|p.K1535Sfs*16|1|0.38|ENSG00000163629|chr4:86769879-86769879|A/-|frameshift_variant;REV__PTPN13|p.N1374Mfs*7|1|0.15|ENSG00000163629|chr4:86764692-86764692|A/-|frameshift_variant;REV__PTPN13|p.T2330Qfs*13|1|0.12|ENSG00000163629|chr4:86807799-86807799|A/-|frameshift_variant	56.72105179125745	1.7418937515398478	1				NaN	NaN	0	NaN	6201	4626	10828
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10830	33.339	NaN	754.73	30	0	242.08	0.034	+			48060	VSSLVSNLL	9	21	466.2766381639746	NaN	0	466.2767639160156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSSLVSNLL_	ENSG00000217128|ENST00000510461|FNIP1;FNIP1|p.L1078S|1|0.25|ENSG00000217128|chr5:131651875-131651875|A/G|missense_variant;nc|ENSG00000217128|Q8TF40-3|FNIP1	39.252832667884924	0.27938773122138094	1				NaN	NaN	0	NaN	6202	4626	10828
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10870	33.43	NaN	1051.3	30	0	591.92	0.143			+	19958	KEGGLEGLSV	10	33	494.76826706727127	987.5219812013426	2	494.76849365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEGGLEGLSV_	REV__nc|ENSG00000179528|Q6XYB7-2|LBX2	41.42661286455405	0.5359995577334734	1				NaN	NaN	0	NaN	6233	4635	10869
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10897	33.492	NaN	2372.6	30	0	1121	0.142	+			44978	TVCLTLTAK	9	32	475.2724615458104	948.5303701584209	2	475.27276611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVCLTLTAK_	ATP1A3|p.I582Tfs*73|1|0.04|ENSG00000105409|chr19:41978212-41978212|A/-|frameshift_variant;ATP1A4|p.E557Nfs*4|1|0.1|ENSG00000132681|chr1:160171424-160171424|G/-|frameshift_variant;ATP1A4|p.P701Lfs*20|1|0.3|ENSG00000132681|chr1:160174218-160174218|C/-|frameshift_variant;ENSG00000018625|ENST00000361216|ATP1A2;ENSG00000105409|ENST00000648268|ATP1A3;ENSG00000132681|ENST00000368081|ATP1A4;ENSG00000163399|ENST00000295598|ATP1A1;ENST00000472488.5_1_1:160085570-160106822:+|nuORF;nc|ENSG00000105409|P13637-2|ATP1A3;nc|ENSG00000105409|P13637-3|ATP1A3;nc|ENSG00000163399|P05023-2|ATP1A1;nc|ENSG00000163399|P05023-3|ATP1A1;nc|ENSG00000163399|P05023-4|ATP1A1	49.536043120802724	0.308405419312776	1				NaN	NaN	0	NaN	6254	4641	10896
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10955	33.636	NaN	3105.9	30	0	948.54	0.142	+			261	AAMPGFIAK	9	33	453.24906194945663	904.4835709657133	2	453.24969482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAMPGFIAK_	ENSG00000122008|ENST00000241436|POLK;ENST00000506928.5_1_5:74842847-74879138:+|nuORF;ENST00000508867.5_1_5:74842847-74877278:+|nuORF;nc|ENSG00000122008|Q9UBT6-2|POLK;nc|ENSG00000122008|Q9UBT6-3|POLK;nc|ENSG00000122008|Q9UBT6-4|POLK;nc|ENSG00000122008|Q9UBT6-5|POLK;nc|ENSG00000122008|Q9UBT6-6|POLK;nc|ENSG00000122008|Q9UBT6-7|POLK;nc|ENSG00000122008|Q9UBT6-8|POLK;POLK|p.K571Nfs*18|1|0.29|ENSG00000122008|chr5:75596401-75596401|A/-|frameshift_variant	60.29395666154354	0.21116425950210296	1				NaN	NaN	0	NaN	6297	4656	10954
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10973	33.681	NaN	1318.1	30	0	443.16	0.142	+			40752	SVDGVILTK	9	33	466.2766381639746	NaN	0	466.2764892578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVDGVILTK_	tr|U7T8Q8|U7T8Q8_FUSNUSignalrecognitionparticleproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=ffhPE=3SV=1	29.14955571784316	0.3303970763161698	1				NaN	NaN	0	NaN	6309	4662	10972
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11043	33.858	NaN	2394.9	30	0	1028.1	0.144	+			32465	QVLSAATIVAK	11	44	550.8361041172844	1099.6576553013688	2	550.8384399414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QVLSAATIVAK_	ENSG00000137076|ENST00000314888|TLN1;ENSG00000171914|ENST00000636159|TLN2;nc|ENSG00000137076|Q9Y490-2|TLN1;TLN1|p.P1628Rfs*20|1|0.44|ENSG00000137076|chr9:35707144-35707144|G/-|frameshift_variant	63.42647028704847	0.292869158926425	1				NaN	NaN	0	NaN	6358	4683	11042
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11145	34.137	NaN	1577.4	30	0	1147.1	0.14	+			43453	TGLTSPEP	8	19	401.2043667722319	NaN	0	401.2043762207031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TGLTSPEP_	nc|ENSG00000267908|P0CG00|ZSCAN5DP	19.359975847455235	1.7418937515398478	1				NaN	NaN	0	NaN	6424	4719	11144
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11154	34.159	NaN	1343.6	30	0	244	0.141	+			17577	IEASKLPK	8	40	443.27392578125	NaN	0	443.27392578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IEASKLPK_	ENSG00000196455|ENST00000356763|PIK3R4	82.30502934623384	1.7418937515398478	1				NaN	NaN	0	NaN	6430	4722	11153
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11171	34.196	NaN	1793.3	30	0	896.31	0.144	+			32278	QTMDMIISK	9	37	533.7666761281976	1065.518799323195	2	533.76904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QTMDMIISK_	ENSG00000117262|ENST00000313835|GPR89A;ENSG00000188092|ENST00000314163|GPR89B;ENST00000460277.5_1_1:145765021-145811987:-|nuORF;ENST00000478307.5_1_1:147400580-147440603:+|nuORF;nc|ENSG00000188092|B7ZAQ6-2|GPR89A;nc|ENSG00000188092|B7ZAQ6-3|GPR89A	38.753607047826485	0.4348790777924195	1				NaN	NaN	0	NaN	6444	4725	11170
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11197	34.263	NaN	946.18	30	0	230.03	0.215			+	17480	ICSQEVNY	8	38	506.7243132136966	NaN	0	506.7239990234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_IC(Carbamidomethyl (C))SQEVNY_	REV__ENSG00000124222|ENST00000371141|STX16;REV__nc|ENSG00000124222|O14662-2|STX16;REV__nc|ENSG00000124222|O14662-4|STX16;REV__nc|ENSG00000124222|O14662-5|STX16;REV__nc|ENSG00000124222|O14662-6|STX16	82.30502934623384	1.7418937515398478	1				NaN	NaN	0	NaN	6461	4734	11196
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11198	34.267	NaN	1874.2	30	0	535.19	0.034	+			15948	HAGLVYEY	8	34	476.23173319845733	950.4489134637147	2	476.23126220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HAGLVYEY_	ENSG00000132141|ENST00000314144|CCT6B;ENSG00000146731|ENST00000275603|CCT6A;ENST00000492618.5_1_7:56127237-56129562:+|nuORF;ENST00000577307.1_1_17:33266566-33269658:-|nuORF;nc|ENSG00000132141|Q92526-2|CCT6B;nc|ENSG00000132141|Q92526-3|CCT6B;nc|ENSG00000146731|P40227-2|CCT6A	29.841539824830324	0.7289191502596711	1				NaN	NaN	0	NaN	6462	4734	11196
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11211	34.305	NaN	1666.3	30	0	548.57	0.142	+			47900	VSLLGLDIK	9	29	479.30231182134526	956.5900707094905	2	479.30242919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSLLGLDIK_	ENSG00000141458|ENST00000269228|NPC1;ENST00000540608.5_1_18:21119776-21166285:-|nuORF;ENST00000586718.1_1_18:21121209-21121323:-|nuORF;nc|ENSG00000141458|O15118-2|NPC1;NPC1|p.C799Lfs*7|1|0.36|ENSG00000141458|chr18:23541186-23541187|-/A|frameshift_variant;NPC1|p.F1207Lfs*35|1|0.33|ENSG00000141458|chr18:23533488-23533488|A/-|frameshift_variant;NPC1|p.G993Efs*4|1|0.22|ENSG00000141458|chr18:23538605-23538605|C/-|frameshift_variant	35.61828744233558	0.47037581924408073	1				NaN	NaN	0	NaN	6469	4740	11210
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11250	34.42	NaN	1364.9	30	0	538.23	0.142				-1	 	0	34	485.3021105641114	484.2948340975114	1	485.30218505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	6490	4758	11249
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11268	34.467	NaN	4973.9	30	0	735.34	0.142	+			44079	TPTGIKVVM	9	56	473.27504057590386	944.5355282186077	2	473.2756652832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TPTGIKVVM_	ENSG00000170043|ENST00000303731|TRAPPC1	104.74654710444128	0.034358562718640136	1				NaN	NaN	0	NaN	6502	4764	11267
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11314	34.585	NaN	835.32	30	0	204.81	0.141			+	8276	EAIASVAVL	9	22	436.75761664059644	871.5006803479929	2	436.75823974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EAIASVAVL_	REV__ENSG00000144730|ENST00000296318|IL17RD;REV__ENST00000469841.5_1_3:57131519-57204269:-|nuORF;REV__nc|ENSG00000144730|Q8NFM7-2|IL17RD;REV__nc|ENSG00000144730|Q8NFM7-3|IL17RD;REV__nc|ENSG00000144730|Q8NFM7-4|IL17RD	37.15910966729921	0.4535818937225704	1				NaN	NaN	0	NaN	6533	4779	11313
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11343	34.661	NaN	2771.5	30	0	1111.4	0.14				-1	 	0	25	379.2088772441908	756.4032015551816	2	379.2098083496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	6553	4788	11342
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11353	34.685	NaN	2578.6	30	0	1958.8	0.14			+	36622	SGGEPLLE	8	18	401.2037621594559	800.3929713857118	2	401.2042236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SGGEPLLE_	REV__BSN|p.L1354Sfs*17|1|0.24|ENSG00000164061|chr3:49653612-49653612|C/-|frameshift_variant;REV__BSN|p.P3390Hfs*97|1|0.22|ENSG00000164061|chr3:49662009-49662009|C/-|frameshift_variant;REV__BSN|p.P3790Hfs*5|1|0.5|ENSG00000164061|chr3:49663523-49663523|C/-|frameshift_variant;REV__BSN|p.T1327Pfs*44|1|0.07|ENSG00000164061|chr3:49653530-49653530|C/-|frameshift_variant;REV__ENSG00000164061|ENST00000296452|BSN	20.481830146152948	0.8005983782650069	1				NaN	NaN	0	NaN	6560	4791	11352
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11647	35.538	NaN	3940.9	30	0	960.23	0.144	+			45277	TVQVYIITK	9	49	532.8212845896344	1063.6280162460687	2	532.82275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVQVYIITK_	ENSG00000114388|ENST00000232501|NPRL2;ENST00000479512.5_1_3:50387244-50387426:-|nuORF;ENST00000487632.5_1_3:50386870-50387426:-|nuORF	92.23892857375223	0.05855307001735979	1				NaN	NaN	0	NaN	6734	4911	11646
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11683	35.65	NaN	1985.3	30	0	377.09	0.142			+	9932	EQVLHLGI	8	43	454.763716845155	NaN	0	454.7642822265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EQVLHLGI_	REV__ENST00000342295.5_2_4:26434113-26434272:+|nuORF	44.53106598305862	1.7418937515398478	1				NaN	NaN	0	NaN	6752	4929	11682
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11868	36.179	NaN	1083.4	30	0	298.65	0.142			+	25803	LSAVVIGLLG	10	24	471.30529418943183	NaN	0	471.3054504394531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSAVVIGLLG_	REV__ENST00000599167.5_1_19:50000650-50000725:+|nuORF	23.04248740728303	0.42010282974921537	1				NaN	NaN	0	NaN	6862	5004	11867
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11939	36.405	NaN	1382.5	30	0	206.6	0.143	+			32579	QYAPSTAQF	9	41	506.7397268503936	1011.4649007675872	2	506.740478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QYAPSTAQF_	ENSG00000122515|ENST00000309315|ZMIZ2;nc|ENSG00000122515|Q8NF64-2|ZMIZ2;nc|ENSG00000122515|Q8NF64-3|ZMIZ2	69.6276240434122	0.14239879520340665	1				NaN	NaN	0	NaN	6897	5040	11938
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11971	36.501	NaN	2977.1	30	0	550.84	0.142	+			42194	TAADTAVYY	9	36	487.72642947869826	973.4383060241965	2	487.72735595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAADTAVYY_	nc|ENSG00000211956|P06331|IGHV4-34;nc|ENSG00000211959|P01824|IGHV4-39;nc|ENSG00000211970|A0A0C4DH41|IGHV4-61;nc|ENSG00000224373|P01825|IGHV4-59;nc|ENSG00000231475|A0A087WSY4|IGHV4-30-2;nc|ENSG00000231475|P0DP07|IGHV4-31;nc|ENSG00000276775|A0A075B6R2|IGHV4-4	85.35947970620816	0.07794846947388434	1				NaN	NaN	0	NaN	6914	5055	11970
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11988	36.545	NaN	2970.8	30	0	580.11	0.142	+			28125	NAISVTTSY	9	48	478.2402244214743	NaN	0	478.2408752441406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAISVTTSY_	ENSG00000198730|ENST00000361367|CTR9	136.26810882979174	0.0003037181779624456	1				NaN	NaN	0	NaN	6925	5061	11987
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12185	37.181	NaN	971.33	30	0	258.05	0.143	+			2315	AMLDTVVFK	9	29	520.2793185513212	NaN	0	520.2788696289062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_AM(Oxidation (M))LDTVVFK_	ENSG00000115233|ENST00000409682|PSMD14;ENST00000477232.5_1_2:162241962-162267908:+|nuORF;ENST00000492908.1_1_2:162265323-162267908:+|nuORF	58.78195531508484	0.1545138866451181	1				NaN	NaN	0	NaN	7020	5163	12184
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12310	37.601	NaN	557.92	30	0	109.16	0.142	+			47320	VPADAVVQY	9	22	481.25332825385965	NaN	0	481.2537536621094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VPADAVVQY_	ENSG00000134285|ENST00000550765|FKBP11;ENST00000546847.5_1_12:49315769-49317670:-|nuORF	27.882242232435846	0.3367954786602879	1				NaN	NaN	0	NaN	7076	5232	12309
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12398	37.945	NaN	3085	30	0	1684.8	0.143	+			30455	QAADILLYK	9	39	517.7975553976013	1033.5805578620025	2	517.7984008789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QAADILLYK_	ENSG00000116874|ENST00000235521|WARS2;nc|ENSG00000116874|Q9UGM6-2|WARS2	38.753607047826485	0.4348790777924195	1				NaN	NaN	0	NaN	7104	5292	12397
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12715	39.082	NaN	1839.4	30	0	589.39	0.143	+			37133	SITSVFITK	9	37	498.2920039028268	994.5694548724537	2	498.29302978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SITSVFITK_	ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;TRRAP-ASNS|1|fusion;TRRAP-ASNS|2|fusion;TRRAP|p.K3443Sfs*19|1|0.28|ENSG00000196367|chr7:99004246-99004246|A/-|frameshift_variant	47.95952297671804	0.32689736945648856	1				NaN	NaN	0	NaN	7223	5490	12714
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12877	39.695	NaN	1061.9	30	0	331.19	0.143	+			23919	LDLPPATVPA	10	27	497.2839989668487	992.5534450004974	2	497.28466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LDLPPATVPA_	ENSG00000164050|ENST00000296440|PLXNB1;PLXNB1|p.L900Sfs*25|1|0.11|ENSG00000164050|chr3:48419592-48419592|G/-|frameshift_variant	27.882242232435846	0.6521336255503853	1				NaN	NaN	0	NaN	7277	5598	12876
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12964	40.034	NaN	3228.9	30	0	1119.6	0.142	+			18874	IVGTVLIIK	9	40	478.3311380337474	NaN	0	478.3302917480469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IVGTVLIIK_	ENSG00000231389|ENST00000419277|HLA-DPA1	118.74307786436346	0.002324367518139777	1				NaN	NaN	0	NaN	7304	5658	12963
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14580	47.703	NaN	1029.7	30	0	211.62	0.14	+			43585	TIGTILIS	8	32	409.2545104692388	816.4944680052777	2	409.2549133300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TIGTILIS_	ENSG00000230301|ENST00000615035|OR5H6;nc|ENSG00000230301|Q8NGV6|OR5H6;OR5H6|p.L271Sfs*18|1|0.22|ENSG00000230301|chr3:98265091-98265091|C/-|frameshift_variant	85.35947970620816	0.2915182781752196	1				NaN	NaN	0	NaN	7513	7065	14579
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2128	11.363	NaN	3730.8	30	0	2458.7	0.143	+			4841	ATPKKSIKK	9	31	500.8294649084064	999.6443768836128	2	500.8297424316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATPKKSIKK_	ENSG00000124575|ENST00000244534|H1-3	38.753607047826485	0.4348790777924195	1				NaN	NaN	0	NaN	3	2123	2127
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2184	11.63	NaN	41303	30	0	13235	0.214	+			22611	KTTQDVKK	8	83	474.2792567552964	NaN	0	474.27911376953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTTQDVKK_	CCNE2|p.R42Efs*38|1|0.07|ENSG00000175305|chr8:94893932-94893932|T/-|frameshift_variant;ENSG00000175305|ENST00000308108|CCNE2;ENST00000517487.5_1_8:95906073-95906449:-|nuORF;nc|ENSG00000175305|O96020-2|CCNE2	107.00750918261382	1.7418937515398478	1				NaN	NaN	0	NaN	11	2171	2183
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2185	11.634	NaN	60806	30	0	10693	0.035			+	21042	KKKQTNKK	8	79	501.8242293247491	1001.6339057162983	2	501.82421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KKKQTNKK_	REV__ENST00000395442.5_1_10:55568369-55568990:-|nuORF	148.04295825190792	0.24280381333290152	1				NaN	NaN	0	NaN	12	2171	2183
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2196	11.659	NaN	621.21	30	0	254.62	0.143	+			33102	RELLKHTK	8	20	512.8151245117188	NaN	0	512.8151245117188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RELLKHTK_	tr|U7T5V1|U7T5V1_FUSNUIron-sulfurcluster-bindingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00170PE=4SV=1	24.20275056022122	1.7418937515398478	1				NaN	NaN	0	NaN	20	2174	2195
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2207	11.686	NaN	1854	30	0	867.34	0.141			+	38322	SRGAVAILL	9	43	450.28742097500884	898.5602890168177	2	450.2873840332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SRGAVAILL_	REV__ENST00000367874.4_1_1:166845454-166845523:-|nuORF	51.33545320467046	0.2872990594074956	1				NaN	NaN	0	NaN	28	2177	2206
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2316	12.233	NaN	528.1	30	0	116.2	0.143	+			15847	GWRLERLL	8	26	521.8123779296875	NaN	0	521.8123779296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GWRLERLL_	ENST00000493582.5_1_2:240274529-240323149:-|nuORF	28.2542754592877	1.7418937515398478	1				NaN	NaN	0	NaN	35	2279	2315
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2321	12.251	NaN	6714.8	30	0	2414.1	0.146	+			5386	ATYETKESKK	10	45	395.54349956779976	1183.6086693035993	3	395.54345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATYETKESKK_	ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65623404-65625570:-|nuORF;nc|ENSG00000165410|Q9Y281-3|CFL2	60.1669710687717	0.3643216362415131	1				NaN	NaN	0	NaN	37	2282	2320
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2328	12.271	NaN	3186.9	30	0	966.53	0.144	+			521	ACRKSDHLS	9	29	339.50286865234375	NaN	0	339.50286865234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ACRKSDHLS_	ENSG00000153820|ENST00000392056|SPHKAP;nc|ENSG00000153820|Q2M3C7-2|SPHKAP;SPHKAP|p.D1487*|1|0.39|ENSG00000153820|chr2:227995684-227995685|-/A|frameshift_variant	19.996771675451527	0.3693019437812985	1				NaN	NaN	0	NaN	41	2285	2327
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2332	12.288	NaN	5962.6	30	0	1797.9	0.143	+			5634	AVDAPRRHK	9	58	525.3019338544918	1048.5893147757836	2	525.3027954101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVDAPRRHK_	ENSG00000119912|ENST00000265986|IDE;ENST00000496903.5_1_10:94214203-94257457:-|nuORF;nc|ENSG00000119912|P14735-2|IDE	28.081489160057373	0.5408112046645406	1				NaN	NaN	0	NaN	42	2288	2331
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2375	12.484	NaN	5740.9	30	0	3705	0.214			+	-1	ENGVRNMRR	9	33	383.1957448232736	1146.565405070021	3	383.196044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ENGVRNM(Oxidation (M))RR_	REV__ENSG00000137054|ENST00000377798|POLR1E;REV__ENST00000442009.6_1_9:37489340-37503196:+|nuORF;REV__nc|ENSG00000137054|Q9GZS1-1|POLR1E	24.519189625965996	0.574102787014149	1				NaN	NaN	0	NaN	49	2324	2374
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2376	12.488	NaN	7386.3	30	0	1540.5	0.036			+	45391	TVTNKSLKQ	9	52	340.201123539909	1017.5815412199271	3	340.2015075683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVTNKSLKQ_	REV__ENSG00000184564|ENST00000647374|SLITRK6;REV__SLITRK6|p.E556Gfs*7|1|0.22|ENSG00000184564|chr13:85794844-85794845|-/T|frameshift_variant;REV__SLITRK6|p.R599Hfs*12|1|0.16|ENSG00000184564|chr13:85794713-85794713|C/-|frameshift_variant	25.57405402267927	0.5642445186134241	1				NaN	NaN	0	NaN	50	2324	2374
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2389	12.526	NaN	1029.1	30	0	159	0.142	+			22688	KVAGAATPKK	10	40	485.806345097438	969.598137261676	2	485.806396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVAGAATPKK_	ENSG00000124575|ENST00000244534|H1-3	68.84614121027924	0.2867470276772903	1				NaN	NaN	0	NaN	57	2330	2388
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2400	12.575	NaN	2540.7	30	0	414.88	0.145	+			40780	SVDPRRRNK	9	32	376.55111350389393	1126.6315111118818	3	376.5513916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVDPRRRNK_	ENSG00000167526|ENST00000311528|RPL13;ENST00000399461.8_1_16:89627605-89629447:+|nuORF;ENST00000484610.5_1_16:89627907-89629447:+|nuORF;ENST00000563749.1_1_16:89627907-89628201:+|nuORF;ENST00000565571.5_1_16:89627367-89628201:+|nuORF	19.996771675451527	0.6112419832031292	1				NaN	NaN	0	NaN	59	2339	2399
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2430	12.709	NaN	5303.5	30	0	1446.4	0.147			+	46117	VDHISEEFKK	10	48	411.2148568760145	1230.6227412282435	3	411.2148742675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VDHISEEFKK_	REV__ENSG00000115808|ENST00000263918|STRN;REV__nc|ENSG00000115808|O43815-2|STRN	35.15202426646627	0.5927656479315102	1				NaN	NaN	0	NaN	65	2363	2429
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2438	12.743	NaN	16716	30	0	3163.1	0.146	+			33949	RSASSATQVHK	11	88	391.21045864336827	1170.609546530305	3	391.2109680175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RSASSATQVHK_	ENST00000361272.8_2_8:17102747-17104366:-|nuORF	104.42354056486148	0.051542069836817306	1				NaN	NaN	0	NaN	67	2369	2437
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2470	12.859	NaN	1197.6	30	0	423.63	0.143	+			19618	KDHNRGRR	8	37	519.7877923013837	1037.5610316695672	2	519.78857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KDHNRGRR_	ENSG00000106346|ENST00000306177|USP42;ENST00000479544.6_1_7:6150764-6196715:+|nuORF;ENST00000521713.1_1_7:6179681-6199085:+|nuORF;nc|ENSG00000106346|Q9H9J4|USP42;USP42|p.A1121Tfs*18|1|0.42|ENSG00000106346|chr7:6154914-6154920|CGCGCCC/-|frameshift_variant	49.44154591367651	0.597725784090933	1				NaN	NaN	0	NaN	81	2387	2469
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2475	12.877	NaN	2441.8	30	0	538.15	0.143	+			17203	HVEQITRK	8	51	505.79061465530174	1009.5666763774035	2	505.79083251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HVEQITRK_	ENSG00000176946|ENST00000407315|THAP4;nc|ENSG00000176946|Q8WY91-2|THAP4	60.97194046774394	0.49215940876911696	1				NaN	NaN	0	NaN	83	2390	2474
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2480	12.894	NaN	966.32	30	0	172.94	0.142				-1	VIPMAAVKQ	9	34	486.7830381455718	NaN	0	486.7828063964844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_VIPM(Oxidation (M))AAVKQ_	ENSG00000171552|ENST00000307677|BCL2L1;nc|ENSG00000171552|Q07817-2|BCL2L1;nc|ENSG00000171552|Q07817-3|BCL2L1	57.81127852772723	0.15865383123342353	1				NaN	NaN	0	NaN	85	2393	2479
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2491	12.932	NaN	14435	30	0	10524	0.142				-1	 	0	45	485.3079858322281	968.6014187312562	2	485.307861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	90	2399	2490
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2502	12.959	NaN	1144.2	30	0	621.23	0.143	+			31810	QPPPLALKQ	9	25	496.2990727985192	990.5835926638384	2	496.2998962402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QPPPLALKQ_	nc|ENSG00000050767|Q86Y22-2|COL23A1	10.865556482863946	0.6112419832031292	1				NaN	NaN	0	NaN	98	2402	2501
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2513	12.986	NaN	2051.5	30	0	955.95	0.214	+			34282	RTKTSHNL	8	36	478.76723349079884	NaN	0	478.7669982910156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTKTSHNL_	ENST00000476125.5_1_3:181427643-181427781:+|nuORF	37.15910966729921	1.7418937515398478	1				NaN	NaN	0	NaN	106	2405	2512
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2514	12.99	NaN	10595	30	0	1936.4	0.035	+			32796	RATKPTVQK	9	71	514.813756707054	1027.612960480908	2	514.8145141601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RATKPTVQK_	ENST00000263196.11_1_22:19055732-19076988:-|nuORF	85.86182877749512	0.07653218437724067	1				NaN	NaN	0	NaN	107	2405	2512
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2522	13.01	NaN	8134.1	30	0	1597.9	0.144				-1	LLDLLMLSL	9	52	349.54468559714917	1045.6122273916476	3	349.54510498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LLDLLM(Oxidation (M))LSL_	ENST00000409718.5_1_2:201342930-201343008:+|nuORF	31.529811441608018	0.5085848003137583	1				NaN	NaN	0	NaN	112	2408	2521
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2533	13.037	NaN	860.24	30	0	409.25	0.214			+	24726	LHPLSEKAR	9	22	525.8048706054688	NaN	0	525.8048706054688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LHPLSEKAR_	REV__nc|ENSG00000290684|A6NFC9|OR2W5P	15.641811463095205	0.38404136392510424	1				NaN	NaN	0	NaN	120	2411	2532
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2534	13.041	NaN	1989.1	30	0	464.48	0.106	+			40426	STVKENMKK	9	49	532.7932402072373	NaN	0	532.793212890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STVKENMKK_	ENST00000590996.5_2_17:41329998-41338351:+|nuORF	47.95952297671804	0.22075498469600283	1				NaN	NaN	0	NaN	121	2411	2532
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2535	13.043	NaN	2908.4	30	0	785.83	0.106			+	20469	KEVVEDTSL	9	51	510.2660928561305	1018.517632779061	2	510.2669982910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEVVEDTSL_	REV__ENSG00000161956|ENST00000321337|SENP3;REV__ENST00000580997.1_1_17:7468099-7469096:+|nuORF;REV__ENST00000583277.1_1_17:7467715-7468388:+|nuORF;REV__SENP3|p.R443Gfs*15|1|0.38|ENSG00000161956|chr17:7566987-7566987|A/-|frameshift_variant	68.78682469695295	0.14603441672067394	1				NaN	NaN	0	NaN	122	2411	2532
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2536	13.044	NaN	1347.1	30	0	309.03	0.034	+			19473	KASSSLPKK	9	35	473.2899692721826	944.5653856111652	2	473.2894287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KASSSLPKK_	ENSG00000104979|ENST00000588234|C19orf53;ENST00000588858.5_1_19:13886394-13889009:+|nuORF	40.05817265558897	0.419577045485086	1				NaN	NaN	0	NaN	123	2411	2532
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2547	13.079	NaN	758.13	30	0	159.74	0.144			+	50912	YGHKMLHK	8	27	507.2691345214844	NaN	0	507.2691345214844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YGHKMLHK_	REV__HIBADH|p.N57H|1|0.31|ENSG00000106049|chr7:27649556-27649556|T/G|missense_variant	27.882242232435846	1.7418937515398478	1				NaN	NaN	0	NaN	128	2417	2546
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2584	13.223	NaN	1246.9	30	0	226.78	0.141	+			43279	TFGKKKGP	8	45	431.7610412167938	NaN	0	431.76129150390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TFGKKKGP_	ENSG00000149806|ENST00000529639|FAU;FAU|p.A131T|1|0.24|ENSG00000149806|chr11:65120692-65120692|C/T|missense_variant	58.78195531508484	1.7418937515398478	1				NaN	NaN	0	NaN	141	2441	2583
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2589	13.24	NaN	970.24	30	0	438.4	0.143	+			11204	FHSKESIVA	9	23	509.2697988230517	1016.5250447129034	2	509.2715759277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FHSKESIVA_	ENSG00000129534|ENST00000310806|MIS18BP1;MIS18BP1|p.K1063Nfs*18|1|0.14|ENSG00000129534|chr14:45206134-45206134|T/-|frameshift_variant;MIS18BP1|p.N380Ifs*3|5|0.35|ENSG00000129534|chr14:45242038-45242038|T/-|frameshift_variant;MIS18BP1|p.S991Nfs*17|1|0.35|ENSG00000129534|chr14:45217046-45217050|TGTAC/-|frameshift_variant;MIS18BP1|p.V839Sfs*20|1|0.14|ENSG00000129534|chr14:45224073-45224073|G/-|frameshift_variant;nc|ENSG00000129534|Q6P0N0-2|MIS18BP1	29.14955571784316	0.5308295550522326	1				NaN	NaN	0	NaN	143	2444	2588
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2613	13.356	NaN	967.97	30	0	266.74	0.142			+	19235	KAANSSTIAV	10	35	481.2691354033108	NaN	0	481.26953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAANSSTIAV_	REV__DPYSL5|p.V376I|1|0.43|ENSG00000157851|chr2:26941986-26941986|G/A|missense_variant	56.72105179125745	0.2610545891966633	1				NaN	NaN	0	NaN	146	2465	2612
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2627	13.409	NaN	1189.3	30	0	348.48	0.144				-1	VVMRDPNTK	9	25	538.2822575605248	1074.5499621878496	2	538.2828979492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_VVM(Oxidation (M))RDPNTK_	chr12:54282662-54282800|482|460.96|0.0|25.46|+|ENST00000677249|HNRNPA1,HNRNPA1;ENSG00000135486|ENST00000340913|HNRNPA1;ENSG00000139675|ENST00000357495|HNRNPA1L2;ENSG00000224578|ENST00000565308|HNRNPA1L3;ENST00000441603.1_1_11:5593122-5593311:-|nuORF;ENST00000452488.1_1_2:41383770-41384067:+|nuORF;ENST00000457695.2_1_X:100110922-100111255:-|nuORF;ENST00000575692.1_1_17:2210089-2210875:+|nuORF;nc|ENSG00000135486|P09651-2|HNRNPA1;nc|ENSG00000135486|P09651-3|HNRNPA1	20.94693142431847	0.6074874384046576	1				NaN	NaN	0	NaN	151	2474	2626
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2633	13.427	NaN	1636.1	30	0	204.09	0.143	+			31824	QPQRKFLE	8	56	523.2912733748606	1044.567993816521	2	523.2925415039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QPQRKFLE_	ENSG00000165953|ENST00000677451|SERPINA12;SERPINA12|p.K155N|1|0.36|ENSG00000165953|chr14:94497933-94497933|C/A|missense_variant;SERPINA12|p.N267Kfs*10|1|0.2|ENSG00000165953|chr14:94496477-94496478|-/T|frameshift_variant	68.484700416344	0.4195245774506064	1				NaN	NaN	0	NaN	154	2477	2632
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2638	13.445	NaN	11159	30	0	6490.1	0.214			+	13935	GRSHKTNPDRI	11	54	427.5655391027135	1279.6747879083405	3	427.56585693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GRSHKTNPDRI_	REV__ENST00000491091.1_1_3:122036542-122036854:+|nuORF	23.37791116691581	0.7445759747191538	1				NaN	NaN	0	NaN	156	2480	2637
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2639	13.448	NaN	1387.5	30	0	412.01	0.037	+			36719	SGTQQPPQGSV	11	35	362.51174732262456	NaN	0	362.5116271972656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SGTQQPPQGSV_	ENSG00000204131|ENST00000633930|NHSL2;nc|ENSG00000204131|Q5HYW2-2|NHSL2	28.5767321226876	0.4380616241468488	1				NaN	NaN	0	NaN	157	2480	2637
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2645	13.465	NaN	1475.1	30	0	295.38	0.145			+	-1	IGMFKSASLL	10	34	361.5367476180355	NaN	0	361.53668212890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_IGM(Oxidation (M))FKSASLL_	REV__tr|U7SSG5|U7SSG5_FUSNUCobalttransportproteinCbiMOS=FusobacteriumnucleatumCTI-5OX=1316586GN=cbiMPE=3SV=1	22.579656572578934	0.4201028297492154	1				NaN	NaN	0	NaN	160	2483	2644
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2659	13.507	NaN	13466	30	0	4270.8	0.141	+			14339	GTAAKSITK	9	67	438.7609413731126	875.5073298130252	2	438.76141357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTAAKSITK_	ENSG00000133574|ENST00000255945|GIMAP4	176.44474024533739	0.0016668318535579616	1				NaN	NaN	0	NaN	168	2489	2658
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2665	13.526	NaN	5256.3	30	0	2339.9	0.143	+			29372	PAGTRLPRK	9	47	498.30933602935073	994.6041191255015	2	498.81121826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PAGTRLPRK_	ENSG00000130751|ENST00000602212|NPAS1	37.81151784470057	0.4459294069877048	1				NaN	NaN	0	NaN	171	2492	2664
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2677	13.566	NaN	3676.6	30	0	1083.1	0.214	+			22687	KVAGAATPK	9	43	421.7581285767295	841.5017042202591	2	421.7587585449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVAGAATPK_	ENSG00000124575|ENST00000244534|H1-3	80.45461616416974	0.09558281504443908	1				NaN	NaN	0	NaN	177	2498	2676
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2678	13.569	NaN	1536.9	30	0	287.93	0.106	+			40926	SVFRVLRR	8	31	344.8853759765625	NaN	0	344.8853759765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVFRVLRR_	ENSG00000160408|ENST00000373146|ST6GALNAC6;nc|ENSG00000257524|Q969X2-2|ST6GALNAC6;nc|ENSG00000257524|Q969X2-3|ST6GALNAC6	13.775330524044264	1.7418937515398478	1				NaN	NaN	0	NaN	178	2498	2676
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2679	13.571	NaN	399.17	30	0	179.29	0.038			+	2747	ARETAIDELH	10	13	385.5316467285156	NaN	0	385.5316467285156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ARETAIDELH_	REV__EEF2K|p.E196Rfs*22|3|0.31|ENSG00000103319|chr16:22251285-22251285|G/-|frameshift_variant;REV__ENSG00000103319|ENST00000263026|EEF2K	11.635926663890343	0.4201028297492154	1				NaN	NaN	0	NaN	179	2498	2676
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2684	13.586	NaN	7790.2	30	0	1822.2	0.142	+			21172	KKVVEKVQ	8	61	479.30842926565805	956.6023055981161	2	479.3083190917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KKVVEKVQ_	CEP290|p.I2385*|1|0.37|ENSG00000198707|chr12:88050410-88050410|T/-|frameshift_variant;CEP290|p.L2448Tfs*8|1|0.11|ENSG00000198707|chr12:88049282-88049283|-/T|frameshift_variant;CEP290|p.R2306Nfs*40|1|0.14|ENSG00000198707|chr12:88055616-88055619|TCTC/-|frameshift_variant;ENSG00000198707|ENST00000552810|CEP290	87.75429964447693	0.2842685068779738	1				NaN	NaN	0	NaN	181	2501	2683
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2697	13.636	NaN	7719.4	30	0	952.95	0.143	+			18784	ITQRGNVAK	9	67	493.7904814349274	985.5664099366548	2	493.7901611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ITQRGNVAK_	ENSG00000120742|ENST00000239944|SERP1;ENSG00000151778|ENST00000379179|SERP2	86.88156770896713	0.07365720931774442	1				NaN	NaN	0	NaN	185	2510	2696
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2703	13.655	NaN	2721.1	30	0	781.37	0.214	+			48363	VTHEGSTVEK	10	61	543.7749749202331	1085.5353969072662	2	543.7756958007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTHEGSTVEK_	nc|ENSG00000211675|P0CG04|IGLC1;nc|ENSG00000211677|P0DOY2|IGLC2;nc|ENSG00000211679|P0DOY3|IGLC3;nc|ENSG00000211685|A0M8Q6|IGLC7;nc|ENSG00000222037|P0CF74|IGLC6;nc|ENSG00000254709|B9A064|IGLL5	98.75417337143367	0.08139658455556813	1				NaN	NaN	0	NaN	188	2513	2702
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2704	13.659	NaN	1015.3	30	0	205.13	0.035	+			48805	VVADKSCEK	9	38	489.74956569861865	NaN	0	489.7488708496094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVADKSCEK_	ENSG00000205220|ENST00000358514|PSMB10;ENST00000575556.1_1_16:67970119-67970555:-|nuORF	75.04331003522576	0.0883683072398826	1				NaN	NaN	0	NaN	189	2513	2702
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2708	13.674	NaN	1424.9	30	0	258.12	0.141			+	40129	STQAKQLK	8	55	452.26643362090186	NaN	0	452.2664794921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STQAKQLK_	REV__ENSG00000105705|ENST00000247001|SUGP1;REV__ENST00000588580.6_1_19:19416529-19427355:-|nuORF;REV__ENST00000606725.5_1_19:19414686-19431305:-|nuORF;REV__nc|ENSG00000105705|Q8IWZ8-2|SUGP1	98.62937762414208	1.7418937515398478	1				NaN	NaN	0	NaN	190	2516	2707
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2713	13.691	NaN	2555.7	30	0	520.96	0.143			+	20420	KETRKVEK	8	60	509.3061832431447	1016.5978135530894	2	509.306396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KETRKVEK_	REV__ENST00000276440.11_1_8:25270087-25270417:+|nuORF	90.60085204095205	0.2756512185673585	1				NaN	NaN	0	NaN	192	2519	2712
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2734	13.764	NaN	3501.9	30	0	770.09	0.214	+			8368	EALRGQPR	8	58	463.7620130153258	925.5094730974516	2	463.76177978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EALRGQPR_	ENST00000482513.5_1_2:61293116-61296033:+|nuORF	76.84663266511073	0.3498490246073164	1				NaN	NaN	0	NaN	201	2531	2733
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2735	13.768	NaN	1897	30	0	443.91	0.037	+			18382	IRATRRGLR	9	34	366.90476794565654	NaN	0	366.9046630859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IRATRRGLR_	ENST00000389413.7_3_7:157332368-157332530:-|nuORF	20.94693142431847	0.3660861156085067	1				NaN	NaN	0	NaN	202	2531	2733
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2746	13.793	NaN	3558.3	30	0	789.45	0.214	+			49187	VVMRDPQTK	9	51	545.2898453410822	1088.5651377489644	2	545.2911376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_VVM(Oxidation (M))RDPQTK_	ENSG00000170144|ENST00000392524|HNRNPA3;ENST00000437410.2_1_1:54441353-54441674:-|nuORF;ENST00000472163.1_1_3:75263799-75264780:+|nuORF;HNRNPA3|p.K200Rfs*147|1|0.13|ENSG00000170144|chr2:177216544-177216544|A/-|frameshift_variant;HNRNPA3|p.Y267Lfs*2|1|0.62|ENSG00000170144|chr2:177216918-177216919|-/T|frameshift_variant;nc|ENSG00000170144|P51991-2|HNRNPA3	67.49366992349736	0.1516260258713357	1				NaN	NaN	0	NaN	210	2534	2745
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2747	13.797	NaN	1287.9	30	0	129.86	0.106	+			16457	HETEQKRL	8	42	520.7787475585938	NaN	0	520.7787475585938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HETEQKRL_	ENSG00000139644|ENST00000267115|TMBIM6;ENST00000553022.1_1_12:50146843-50152319:+|nuORF;nc|ENSG00000139644|P55061-2|TMBIM6	74.25504064058377	1.7418937515398478	1				NaN	NaN	0	NaN	211	2534	2745
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2748	13.799	NaN	606.16	30	0	125.18	0.034			+	15563	GVFSGTSRQ	9	33	469.73901419347095	NaN	0	469.7388000488281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GVFSGTSRQ_	REV__ENSG00000004864|ENST00000265631|SLC25A13;REV__ENST00000484495.5_1_7:95799231-95818686:-|nuORF;REV__nc|ENSG00000004864|Q9UJS0-2|SLC25A13	27.882242232435846	0.3367954786602879	1				NaN	NaN	0	NaN	212	2534	2745
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2760	13.824	NaN	4208.6	30	0	639.27	0.214	+			41439	SVNKASTVTK	10	66	517.7958395223948	1033.5771261115895	2	517.7965087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVNKASTVTK_	ENSG00000039523|ENST00000042381|RIPOR1;ENST00000569733.6_1_16:67575293-67580037:+|nuORF;nc|ENSG00000039523|Q6ZS17-3|RIPOR1;nc|ENSG00000039523|Q6ZS17-4|RIPOR1;nc|ENSG00000039523|Q6ZS17|RIPOR1	128.3478880297481	0.01553957493207534	1				NaN	NaN	0	NaN	221	2537	2759
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2761	13.828	NaN	1470.3	30	0	251.91	0.034	+			14715	GTIKPAFNQ	9	52	488.2649640573473	NaN	0	488.2648010253906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTIKPAFNQ_	ENSG00000162105|ENST00000601538|SHANK2;nc|ENSG00000162105|Q9UPX8-1|SHANK2;nc|ENSG00000162105|Q9UPX8-4|SHANK2;SHANK2|p.I1007Sfs*18|1|0.27|ENSG00000162105|chr11:70486136-70486137|-/C|frameshift_variant;SHANK2|p.P1067Sfs*36|1|0.11|ENSG00000162105|chr11:70485957-70485958|-/A|frameshift_variant;SHANK2|p.P1101Lfs*73|1|0.06|ENSG00000162105|chr11:70485854-70485854|G/-|frameshift_variant;SHANK2|p.Q852Sfs*20|1|0.32|ENSG00000162105|chr11:70486603-70486604|-/G|frameshift_variant;SHANK2|p.T905Sfs*11|1|0.27|ENSG00000162105|chr11:70486442-70486443|-/C|frameshift_variant	74.25504064058377	0.09106938647426577	1				NaN	NaN	0	NaN	222	2537	2759
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2766	13.843	NaN	703.5	30	0	146.88	0.143	+			22631	KTVKDAVQK	9	41	508.8098449707031	NaN	0	508.8098449707031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTVKDAVQK_	ENSG00000103510|ENST00000219797|KAT8;ENST00000539683.2_1_16:31129164-31131922:+|nuORF;KAT8|p.Y323Tfs*48|1|0.44|ENSG00000103510|chr16:31130315-31130315|C/-|frameshift_variant;nc|ENSG00000103510|Q9H7Z6-2|KAT8	46.45678178249821	0.2311111838007999	1				NaN	NaN	0	NaN	224	2540	2765
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2774	13.863	NaN	4020.3	30	0	851.31	0.142	+			6408	AVVKPGNTK	9	61	457.27680813620356	912.5390633392071	2	457.2767639160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVVKPGNTK_	ENSG00000178974|ENST00000313833|FBXO34;FBXO34|p.I120Lfs*13|3|0.36|ENSG00000178974|chr14:55350743-55350743|A/-|frameshift_variant;FBXO34|p.L485Cfs*13|1|0.39|ENSG00000178974|chr14:55351837-55351837|T/-|frameshift_variant	115.49404669440601	0.023927554121326553	1				NaN	NaN	0	NaN	229	2543	2773
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2793	13.912	NaN	1712	30	0	349.05	0.215	+			17206	HVGDPSVKK	9	35	483.77181350234684	NaN	0	483.77178955078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HVGDPSVKK_	ENSG00000057294|ENST00000340811|PKP2;nc|ENSG00000057294|Q99959|PKP2	99.01295224348159	0.023427377858318825	1				NaN	NaN	0	NaN	242	2549	2792
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2794	13.916	NaN	4641.8	30	0	821.23	0.036	+			21052	KKKSTNNLK	9	52	530.8273044946164	1059.6400560560328	2	530.82763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KKKSTNNLK_	nc|ENSG00000261011|Q8TF27|AGAP11	68.84614121027924	0.14577793175421136	1				NaN	NaN	0	NaN	243	2549	2792
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2802	13.936	NaN	12306	30	0	2145.1	0.214	+			5402	ATYGKPVHH	9	60	505.2641043276321	1008.5136557220642	2	505.2641906738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATYGKPVHH_	ENSG00000174748|ENST00000307839|RPL15;ENST00000436146.1_1_3:23959450-23960989:+|nuORF;ENST00000490223.1_1_3:23959920-23960989:+|nuORF;nc|ENSG00000174748|P61313-2|RPL15	98.62937762414208	0.04060045538121712	1				NaN	NaN	0	NaN	248	2552	2801
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2803	13.939	NaN	6769.7	30	0	944.04	0.036	+			39066	SSSRAVVVKK	10	54	354.22050095758243	NaN	0	354.22052001953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSSRAVVVKK_	CON__H-INV:HIT000292931;CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	66.96192283764107	0.17742606645642828	1				NaN	NaN	0	NaN	249	2552	2801
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2818	13.99	NaN	1221.9	30	0	222.4	0.214	+			18682	ITARTTALQ	9	38	487.7855224609375	NaN	0	487.7855224609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ITARTTALQ_	ENSG00000091592|ENST00000572272|NLRP1;ENST00000571307.1_1_17:5433304-5487319:-|nuORF;nc|ENSG00000091592|Q9C000-2|NLRP1;nc|ENSG00000091592|Q9C000-3|NLRP1;nc|ENSG00000091592|Q9C000-4|NLRP1;nc|ENSG00000091592|Q9C000-5|NLRP1;NLRP1|p.K583Rfs*14|2|0.29|ENSG00000091592|chr17:5558948-5558948|T/-|frameshift_variant	44.116797842482775	0.2472372736944149	1				NaN	NaN	0	NaN	255	2561	2817
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2819	13.994	NaN	1349.9	30	0	139.33	0.034	+			17911	IGIAWGQSK	9	48	480.267137281766	NaN	0	480.26715087890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IGIAWGQSK_	LTBP3|p.T309I|1|0.08|ENSG00000168056|chr11:65553469-65553469|G/A|missense_variant	63.30626980617807	0.13521764763214936	1				NaN	NaN	0	NaN	256	2561	2817
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2823	14.008	NaN	3330.3	30	0	536.65	0.214	+			35589	SAYRQPVKK	9	53	538.8146330497757	1075.6147131663513	2	538.8153686523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAYRQPVKK_	ENST00000473871.1_1_13:37583848-37586479:-|nuORF;nc|ENSG00000102710|Q8NEM7-2|SUPT20H;nc|ENSG00000102710|Q8NEM7-3|SUPT20H	51.52775601994872	0.28504342437107444	1				NaN	NaN	0	NaN	257	2564	2822
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2824	14.012	NaN	462.74	30	0	57.459	0.106	+			16235	HEEESGGRSV	10	27	543.745361328125	NaN	0	543.745361328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HEEESGGRSV_	ENSG00000047410|ENST00000367478|TPR	35.15202426646627	0.38475398474706135	1				NaN	NaN	0	NaN	258	2564	2822
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2825	14.014	NaN	3629.5	30	0	1225.9	0.036	+			35590	SAYRQPVKK	9	43	359.54522268997226	1075.6138386701168	3	359.54541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAYRQPVKK_	ENST00000473871.1_1_13:37583848-37586479:-|nuORF;nc|ENSG00000102710|Q8NEM7-2|SUPT20H;nc|ENSG00000102710|Q8NEM7-3|SUPT20H	44.377184641726394	0.36891676396732553	1				NaN	NaN	0	NaN	259	2564	2822
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2831	14.031	NaN	1589.1	30	0	541.19	0.143	+			36894	SIHGRPVTK	9	43	497.79354155662446	993.572530180049	2	497.79345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIHGRPVTK_	ENSG00000138640|ENST00000264344|FAM13A;ENST00000508360.5_1_4:89653076-89671014:-|nuORF;ENST00000511573.5_1_4:89649686-89680064:-|nuORF;FAM13A|p.E827K|1|0.28|ENSG00000138640|chr4:88739113-88739113|C/T|missense_variant;nc|ENSG00000138640|O94988-1|FAM13A;nc|ENSG00000138640|O94988-3|FAM13A;nc|ENSG00000138640|O94988-5|FAM13A;nc|ENSG00000138640|O94988-6|FAM13A	53.08895987439943	0.27122541748218487	1				NaN	NaN	0	NaN	262	2567	2830
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2836	14.048	NaN	2123.2	30	0	653.38	0.143	+			22173	KSSKPIMEK	9	46	524.2970268815991	1046.579500829998	2	524.2977294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSSKPIMEK_	ENSG00000114315|ENST00000232424|HES1;ENST00000476918.1_1_3:193854169-193854699:+|nuORF;HES1|p.L54Efs*15|1|0.25|ENSG00000114315|chr3:194136667-194136668|TC/-|frameshift_variant	83.6470233535746	0.08277643980271215	1				NaN	NaN	0	NaN	264	2570	2835
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2844	14.068	NaN	1944.8	30	0	644.59	0.146	+			39824	STLIFLCEMK	10	29	395.5385437011719	NaN	0	395.5385437011719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STLIFLCEMK_	L1ME1_dup14741|chr8:25510836-25512219:-|1.4707505823140987|0.2188578600898351|2.75|482.0|79|1|anti-sense	22.579656572578934	0.4201028297492154	1				NaN	NaN	0	NaN	269	2573	2843
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2854	14.104	NaN	9206.6	30	0	2382	0.214	+			6169	AVQKKTFTK	9	66	525.819012815529	1049.623472697858	2	525.8196411132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVQKKTFTK_	ENSG00000115306|ENST00000356805|SPTBN1;ENSG00000160460|ENST00000598249|SPTBN4;ENSG00000173898|ENST00000533211|SPTBN2;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1;nc|ENSG00000160460|Q9H254-2|SPTBN4;nc|ENSG00000160460|Q9H254-4|SPTBN4;nc|ENSG00000173898|O15020-2|SPTBN2;SPTBN1|p.K503Rfs*24|1|0.06|ENSG00000115306|chr2:54626095-54626095|G/-|frameshift_variant;SPTBN2|p.P924Qfs*35|1|0.39|ENSG00000173898|chr11:66701629-66701629|G/-|frameshift_variant	131.61620852596164	0.014413238321579053	1				NaN	NaN	0	NaN	273	2579	2853
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2855	14.108	NaN	4360.8	30	0	1183.2	0.033	+			39734	STISSNASK	9	53	447.72973898095296	893.4449250287059	2	447.729736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STISSNASK_	ENSG00000101166|ENST00000355937|PRELID3B;nc|ENSG00000101166|Q9Y3B1-2|PRELID3B	89.02883481214508	0.06760336634167786	1				NaN	NaN	0	NaN	274	2579	2853
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2874	14.156	NaN	3478.5	30	0	2141.2	0.143			+	29046	NTDLRLKR	8	40	508.30335780619885	1014.5921626791977	2	508.3041076660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NTDLRLKR_	REV__ENSG00000167984|ENST00000359128|NLRC3;REV__nc|ENSG00000167984|Q7RTR2-2|NLRC3;REV__nc|ENSG00000167984|Q7RTR2-3|NLRC3;REV__nc|ENSG00000167984|Q7RTR2-4|NLRC3	29.14955571784316	0.7342621283720113	1				NaN	NaN	0	NaN	287	2585	2873
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2881	14.175	NaN	1884.6	30	0	637.9	0.214	+			5068	ATSKPVPAEK	10	50	514.293521063313	NaN	0	514.2929077148438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSKPVPAEK_	ENSG00000182934|ENST00000332118|SRPRA;nc|ENSG00000182934|P08240-2|SRPRA	57.148748479083515	0.2575619524842407	1				NaN	NaN	0	NaN	291	2588	2880
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2882	14.178	NaN	1604.9	30	0	368.75	0.034	+			21933	KSADPLKSK	9	42	487.2878288153002	972.5611046974004	2	487.287841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KSADPLKSK_	CAPN7|p.K253Nfs*21|1|0.35|ENSG00000131375|chr3:15227870-15227870|A/-|frameshift_variant;ENSG00000131375|ENST00000253693|CAPN7;ENST00000457023.1_1_3:15247773-15262489:+|nuORF	66.96192283764107	0.15557981141143568	1				NaN	NaN	0	NaN	292	2588	2880
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2888	14.195	NaN	4408.3	30	0	415.26	0.214	+			32780	RASHPIVQK	9	55	518.3066845115862	1034.5988160899724	2	518.307373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RASHPIVQK_	ENSG00000112159|ENST00000369393|MDN1;MDN1|p.E2692*|2|0.32|ENSG00000112159|chr6:89706133-89706134|-/A|frameshift_variant;MDN1|p.F2691Lfs*7|2|0.37|ENSG00000112159|chr6:89706134-89706134|A/-|frameshift_variant;MDN1|p.K2642Nfs*17|2|0.29|ENSG00000112159|chr6:89707449-89707449|T/-|frameshift_variant;MDN1|p.L4077Cfs*15|1|0.16|ENSG00000112159|chr6:89680625-89680625|G/-|frameshift_variant;MDN1|p.L5278Ffs*6|1|0.18|ENSG00000112159|chr6:89652273-89652274|-/A|frameshift_variant	80.45461616416974	0.09558281504443908	1				NaN	NaN	0	NaN	295	2591	2887
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2889	14.198	NaN	1197.5	30	0	167.59	0.034			+	36559	SFPVTTAVAA	10	52	482.259191227868	962.503829522536	2	482.26025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SFPVTTAVAA_	REV__nc|ENSG00000079156|Q9BZF3-3|OSBPL6;REV__nc|ENSG00000079156|Q9BZF3-5|OSBPL6	40.77816245573522	0.5419747034533848	1				NaN	NaN	0	NaN	296	2591	2887
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2907	14.245	NaN	5153.5	30	0	1288.8	0.214	+			22017	KSGPVIAKR	9	55	478.30623641271904	954.5979198922381	2	478.3062744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSGPVIAKR_	ENSG00000109920|ENST00000263773|FNBP4;FNBP4|p.G931Efs*17|1|0.32|ENSG00000109920|chr11:47722991-47722991|T/-|frameshift_variant;FNBP4|p.K790Efs*7|1|0.34|ENSG00000109920|chr11:47724123-47724124|TT/-|frameshift_variant;FNBP4|p.P715Hfs*26|1|0.51|ENSG00000109920|chr11:47724643-47724643|G/-|frameshift_variant;FNBP4|p.W950Vfs*7|1|0.22|ENSG00000109920|chr11:47720045-47720046|-/T|frameshift_variant;nc|ENSG00000109920|Q8N3X1-2|FNBP4	123.20810148215591	0.019257656778428764	1				NaN	NaN	0	NaN	308	2597	2906
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2908	14.248	NaN	2233.7	30	0	921.51	0.106			+	36635	SGGWLPLELGP	11	30	375.8683390167088	NaN	0	375.86834716796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SGGWLPLELGP_	REV__ENST00000335464.9_1_17:72833969-72834278:+|nuORF	24.231819034082204	0.456735970842152	1				NaN	NaN	0	NaN	309	2597	2906
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2909	14.25	NaN	867.33	30	0	293.59	0.035			+	15532	GVDDVFLVL	9	21	326.1824645996094	NaN	0	326.1824645996094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GVDDVFLVL_	REV__sp|F5HET1|UL78_HCMVMProteinUL78OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL78PE=1SV=1;REV__sp|P16751|UL78_HCMVAUncharacterizedproteinUL78OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL78PE=1SV=1	20.94693142431847	0.3660861156085067	1				NaN	NaN	0	NaN	310	2597	2906
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2920	14.276	NaN	1451.3	30	0	471.61	0.143	+			19723	KDTKQILR	8	38	501.30866443277125	1000.6027759323425	2	501.3097839355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KDTKQILR_	ENSG00000183207|ENST00000595090|RUVBL2;ENST00000596247.5_1_19:49507512-49519096:+|nuORF;nc|ENSG00000183207|Q9Y230-2|RUVBL2	69.6276240434122	0.4100012001731381	1				NaN	NaN	0	NaN	318	2600	2919
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2931	14.303	NaN	8482.4	30	0	1215	0.214	+			20037	KEKAKETAL	9	65	509.30070709957056	1016.5868612659411	2	509.3019714355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEKAKETAL_	ENSG00000169230|ENST00000303204|PRELID1;ENST00000503853.1_1_5:176733373-176733568:+|nuORF;ENST00000567272.1_1_6:126965256-126965442:+|nuORF;nc|ENSG00000169230|Q9Y255-2|PRELID1	112.41091882917199	0.026537921851008135	1				NaN	NaN	0	NaN	326	2603	2930
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2932	14.306	NaN	3424.8	30	0	520.81	0.035	+			23126	KVVVSPTKK	9	52	493.3240902590408	984.6336275848817	2	493.3244934082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVVVSPTKK_	ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232323706-232327997:-|nuORF	136.26810882979174	0.012230845423532208	1				NaN	NaN	0	NaN	327	2603	2930
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2939	14.324	NaN	4005.8	30	0	1709.4	0.143	+			23127	KVVVSPTKK	9	50	329.2182958355802	984.6330581069406	3	329.21844482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVVVSPTKK_	ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232323706-232327997:-|nuORF	60.11826168202944	0.21262886028301267	1				NaN	NaN	0	NaN	331	2606	2938
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2945	14.343	NaN	3254.7	30	0	659.53	0.214	+			30756	QDNQTKNHV	9	58	542.2619910821808	1082.5094292311614	2	542.262939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QDNQTKNHV_	CYSLTR1|p.K219Nfs*3|1|0.33|ENSG00000173198|chrX:78273090-78273090|T/-|frameshift_variant;CYSLTR1|p.N224Ifs*9|1|0.59|ENSG00000173198|chrX:78273076-78273076|T/-|frameshift_variant;ENSG00000173198|ENST00000373304|CYSLTR1	53.351449002276354	0.2690372970092375	1				NaN	NaN	0	NaN	334	2609	2944
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2946	14.347	NaN	4956.5	30	0	1662.3	0.037			+	-1	ATARWYRC	8	33	361.84391921135267	1082.509928234258	3	361.8439636230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_ATARWYRC(Carbamidomethyl (C))_	REV__ENST00000595533.1_3_19:23545455-23578201:-|nuORF;REV__ENST00000596989.1_1_19:23491864-23578234:-|nuORF	17.364965105453717	0.7956685240855921	1				NaN	NaN	0	NaN	335	2609	2944
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2950	14.362	NaN	6345.3	30	0	1562.1	0.143				-1	MAPGRAVAGL	10	42	334.1795247577852	999.5167448735556	3	334.17974853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))M(Oxidation (M))APGRAVAGL_	ENSG00000138821|ENST00000356736|SLC39A8;nc|ENSG00000138821|Q9C0K1-3|SLC39A8;SLC39A8|p.E285Sfs*8|3|0.32|ENSG00000138821|chr4:102268068-102268068|T/-|frameshift_variant	36.446750945000026	0.5818864909973037	1				NaN	NaN	0	NaN	336	2612	2949
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2957	14.382	NaN	852.8	30	0	379.66	0.14	+			48062	VSSNSALQ	8	29	403.2061789704139	NaN	0	403.20599365234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSSNSALQ_	ENSG00000121073|ENST00000240333|SLC35B1;ENST00000435059.6_1_17:47781399-47785273:-|nuORF;ENST00000504260.5_1_17:47783523-47784713:-|nuORF;ENST00000508607.1_1_17:47783523-47785148:-|nuORF;ENST00000508926.1_1_17:47782482-47783697:-|nuORF;ENST00000509781.5_1_17:47783523-47785306:-|nuORF;nc|ENSG00000121073|P78383-2|SLC35B1	62.107414245175825	1.7418937515398478	1				NaN	NaN	0	NaN	340	2615	2956
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2962	14.4	NaN	1237.4	30	0	184.87	0.142	+			40603	SVAHSPPEK	9	42	476.24835596223414	950.4821589912683	2	476.2488098144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVAHSPPEK_	ENSG00000167173|ENST00000394987|C15orf39;nc|nan|Q6ZRI6-2|C15orf39	77.31757898189308	0.1091473830098891	1				NaN	NaN	0	NaN	342	2618	2961
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2968	14.419	NaN	961.56	30	0	235.18	0.142			+	22351	KTGTKNTY	8	36	456.7431046792311	NaN	0	456.7430419921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTGTKNTY_	REV__ENST00000517831.5_1_8:86133134-86133284:+|nuORF	42.396135135203025	1.7418937515398478	1				NaN	NaN	0	NaN	345	2621	2967
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2975	14.45	NaN	3322.8	30	0	1231.3	0.214			+	-1	CSEIEKVRSCV	11	53	437.2130274157269	1308.6172528473808	3	437.2134094238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_CSEIEKVRSC(Carbamidomethyl (C))V_	REV__DENND2C|p.N406Kfs*11|1|0.29|ENSG00000175984|chr1:114621904-114621905|-/T|frameshift_variant;REV__DENND2C|p.V827Cfs*15|1|0.35|ENSG00000175984|chr1:114587905-114587906|-/A|frameshift_variant;REV__ENSG00000175984|ENST00000393274|DENND2C;REV__nc|ENSG00000175984|Q68D51-2|DENND2C;REV__nc|ENSG00000175984|Q68D51-3|DENND2C	27.64392233501311	0.6998289966465058	1				NaN	NaN	0	NaN	346	2627	2974
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2976	14.454	NaN	1180.5	30	0	155.11	0.035	+			46326	VEKKKEPSV	9	39	522.3087013954597	1042.6028498577193	2	522.3087768554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VEKKKEPSV_	ENSG00000167674|ENST00000616600|HDGFL2;nc|ENSG00000167674|Q7Z4V5-2|HDGFL2;nc|ENSG00000167674|Q7Z4V5-3|HDGFL2;nc|ENSG00000167674|Q7Z4V5-4|HDGFL2	75.04331003522576	0.118981335847003	1				NaN	NaN	0	NaN	347	2627	2974
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2985	14.476	NaN	1991	30	0	354.1	0.143	+			12408	GEAKPRKTL	9	44	500.3013164784169	998.5880800236338	2	500.3014221191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEAKPRKTL_	ENSG00000099290|ENST00000282633|WASHC2A;ENSG00000172661|ENST00000623400|WASHC2C;nc|ENSG00000099290|Q641Q2-2|WASHC2A;nc|ENSG00000172661|Q9Y4E1-1|WASHC2C;nc|ENSG00000172661|Q9Y4E1-2|WASHC2C;nc|ENSG00000172661|Q9Y4E1-3|WASHC2C;nc|ENSG00000172661|Q9Y4E1-4|WASHC2C;nc|ENSG00000172661|Q9Y4E1-6|WASHC2C	56.72105179125745	0.24094814563026265	1				NaN	NaN	0	NaN	353	2630	2984
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2989	14.493	NaN	2142.5	30	0	233.97	0.214	+			40421	STVHGGIQK	9	52	463.75658509195887	NaN	0	463.7568664550781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STVHGGIQK_	ENSG00000091009|ENST00000265271|RBM27;RBM27|p.K816Tfs*63|2|0.2|ENSG00000091009|chr5:146267757-146267758|AA/-|frameshift_variant	93.19546047674547	0.03515475374905802	1				NaN	NaN	0	NaN	354	2633	2988
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2990	14.497	NaN	1727.7	30	0	341.97	0.106			+	48536	VTNTKAVSK	9	45	474.27972278817504	946.5448926431501	2	474.27947998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTNTKAVSK_	REV__DENND4A|p.F322Lfs*8|1|0.27|ENSG00000174485|chr15:65737781-65737781|A/-|frameshift_variant;REV__DENND4A|p.K1156Nfs*49|1|0.32|ENSG00000174485|chr15:65690994-65690994|T/-|frameshift_variant;REV__DENND4A|p.M800Cfs*75|1|0.33|ENSG00000174485|chr15:65702337-65702337|T/-|frameshift_variant;REV__DENND4A|p.S1755Vfs*10|1|0.47|ENSG00000174485|chr15:65664687-65664687|T/-|frameshift_variant;REV__ENSG00000174485|ENST00000443035|DENND4A;REV__ENST00000568515.1_1_15:66007788-66048788:-|nuORF;REV__nc|ENSG00000174485|Q7Z401-2|DENND4A;REV__nc|ENSG00000174485|Q7Z401|DENND4A	75.04331003522576	0.118981335847003	1				NaN	NaN	0	NaN	355	2633	2988
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2991	14.499	NaN	781.49	30	0	204.85	0.035	+			9339	EILQTFPH	8	46	492.7591857910156	NaN	0	492.7591857910156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EILQTFPH_	ENSG00000168769|ENST00000380013|TET2;nc|ENSG00000168769|Q6N021-2|TET2;nc|ENSG00000168769|Q6N021-3|TET2;TET2|p.V1949Sfs*7|1|0.31|ENSG00000168769|chr4:105276348-105276349|-/A|frameshift_variant	40.5726180659479	1.7418937515398478	1				NaN	NaN	0	NaN	356	2633	2988
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3011	14.55	NaN	8257	30	0	2245.3	0.214	+			49340	VVSKSGSLK	9	61	452.7769226581004	NaN	0	452.7769470214844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVSKSGSLK_	ENSG00000166197|ENST00000605788|NOLC1;ENST00000477977.1_1_10:103920762-103923575:+|nuORF;nc|ENSG00000166197|Q14978-2|NOLC1;nc|ENSG00000166197|Q14978-3|NOLC1	117.5257442709337	0.0029007600543599623	1				NaN	NaN	0	NaN	370	2639	3010
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3012	14.553	NaN	6109.4	30	0	1271	0.037	+			33035	REKDTVKKL	9	59	372.895836602304	1115.665680407112	3	372.8961486816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_REKDTVKKL_	ENSG00000125844|ENST00000377813|RRBP1;nc|ENSG00000125844|Q9P2E9-3|RRBP1	55.08391021199286	0.2545954270840753	1				NaN	NaN	0	NaN	371	2639	3010
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3024	14.579	NaN	2888.4	30	0	373.7	0.215	+			13994	GSDRDTLAK	9	51	481.74825958748994	961.4819662417799	2	481.7487487792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSDRDTLAK_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	77.31757898189308	0.1091473830098891	1				NaN	NaN	0	NaN	380	2642	3023
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3025	14.582	NaN	15765	30	0	4275.4	0.038			+	25468	LPQYGGAGRRQ	11	46	401.5503400499841	1201.6291907501522	3	401.5506591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LPQYGGAGRRQ_	REV__ENSG00000197136|ENST00000355703|PCNX3;REV__nc|ENSG00000197136|Q9H6A9-2|PCNX3	35.17822180527639	0.6208003396870814	1				NaN	NaN	0	NaN	381	2642	3023
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3033	14.602	NaN	2718.3	30	0	300.65	0.142	+			46896	VIQKLAPF	8	55	458.2847250030628	914.5548970729257	2	458.28399658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VIQKLAPF_	ENSG00000146192|ENST00000274963|FGD2;ENST00000373535.6_1_6:36981409-36988336:+|nuORF;ENST00000464083.5_1_6:36973566-36981682:+|nuORF;ENST00000470273.5_1_6:36981367-36981682:+|nuORF;ENST00000494343.5_1_6:36981367-36995936:+|nuORF;FGD2|p.K560Qfs*14|1|0.4|ENSG00000146192|chr6:37027495-37027496|-/G|frameshift_variant	44.53106598305862	0.628196326904373	1				NaN	NaN	0	NaN	386	2645	3032
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3039	14.62	NaN	3279	30	0	1062	0.147			+	-1	VVCLSSIFRF	10	45	409.89103405838114	1226.6512727753434	3	409.8912353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_VVC(Carbamidomethyl (C))LSSIFRF_	REV__ENST00000477132.1_1_2:37544174-37551396:-|nuORF	36.446750945000026	0.5818864909973037	1				NaN	NaN	0	NaN	389	2648	3038
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3048	14.644	NaN	836.6	30	0	85.721	0.214	+			31726	QNYRIPPPQ	9	43	556.7952992818472	NaN	0	557.2507934570312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QNYRIPPPQ_	ENST00000417201.3_1_9:125014204-125027038:-|nuORF	37.15910966729921	0.2899585034171616	1				NaN	NaN	0	NaN	395	2651	3047
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3049	14.648	NaN	529.46	30	0	66.519	0.034			+	33862	RRKRAEAG	8	34	472.28189883887904	NaN	0	472.2826232910156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RRKRAEAG_	REV__ENST00000532926.5_1_11:7598707-7598800:+|nuORF	60.97194046774394	1.7418937515398478	1				NaN	NaN	0	NaN	396	2651	3047
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3060	14.673	NaN	92680	30	0	33997	0.214	+			22795	KVFGGTVHKK	10	91	367.55707566722265	1099.649397601868	3	367.55712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVFGGTVHKK_	ENSG00000163655|ENST00000496455|GMPS;GMPS|p.S473Lfs*26|1|0.37|ENSG00000163655|chr3:155922281-155922281|T/-|frameshift_variant;nc|ENSG00000163655|P49915-2|GMPS	99.78786539795823	0.07832680346773438	1				NaN	NaN	0	NaN	404	2654	3059
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3061	14.677	NaN	9831.4	30	0	1842.5	0.106	+			22796	KVFGGTVHKK	10	66	550.8321661691123	1099.6497794050244	2	550.83349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVFGGTVHKK_	ENSG00000163655|ENST00000496455|GMPS;GMPS|p.S473Lfs*26|1|0.37|ENSG00000163655|chr3:155922281-155922281|T/-|frameshift_variant;nc|ENSG00000163655|P49915-2|GMPS	155.5333702123263	0.007513046059728936	1				NaN	NaN	0	NaN	405	2654	3059
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3062	14.678	NaN	1051.6	30	0	189.89	0.106	+			48373	VTHHVSVTK	9	33	504.28546142578125	NaN	0	504.28546142578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTHHVSVTK_	ENSG00000164828|ENST00000401592|SUN1;ENST00000413171.6_1_7:892397-912965:+|nuORF;ENST00000475971.5_1_7:893033-912965:+|nuORF;nc|ENSG00000164828|O94901-5|SUN1;nc|ENSG00000164828|O94901-6|SUN1;nc|ENSG00000164828|O94901-9|SUN1;SUN1|p.E739Gfs*27|1|0.41|ENSG00000164828|chr7:872532-872533|-/G|frameshift_variant	44.377184641726394	0.24544280798894275	1				NaN	NaN	0	NaN	406	2654	3059
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3063	14.68	NaN	751.85	30	0	96.448	0.034	+			42755	TDQVSLLR	8	39	466.2637389601166	NaN	0	466.26361083984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TDQVSLLR_	ENSG00000175745|ENST00000327111|NR2F1	60.97194046774394	1.7418937515398478	1				NaN	NaN	0	NaN	407	2654	3059
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3075	14.706	NaN	2469.2	30	0	339.22	0.214	+			19350	KAKQLPSKL	9	69	506.8294392048255	NaN	0	506.8025817871094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAKQLPSKL_	ANK3|p.K4020Rfs*45|4|0.35|ENSG00000151150|chr10:60068822-60068822|T/-|frameshift_variant;ANK3|p.K4140Nfs*15|2|0.27|ENSG00000151150|chr10:60064188-60064188|T/-|frameshift_variant;ANK3|p.S4352Vfs*2|1|0.51|ENSG00000151150|chr10:60055669-60055670|-/C|frameshift_variant;ANK3|p.W4141Mfs*12|1|0.36|ENSG00000151150|chr10:60064187-60064188|-/T|frameshift_variant;ENSG00000151150|ENST00000280772|ANK3	58.22992032128504	0.15686832049467786	1				NaN	NaN	0	NaN	416	2657	3074
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3076	14.709	NaN	3642.7	30	0	924.75	0.106	+			15355	GTVSKVTGK	9	61	438.7606393034935	875.5067256737871	2	438.7606506347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTVSKVTGK_	ENSG00000196526|ENST00000420658|AFAP1;nc|ENSG00000196526|Q8N556|AFAP1	76.16968421966216	0.11411088698345859	1				NaN	NaN	0	NaN	417	2657	3074
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3077	14.711	NaN	3645.6	30	0	935.57	0.106			+	12331	GDISELSLPAL	11	42	372.2058763355393	NaN	0	372.205810546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GDISELSLPAL_	REV__ENST00000405486.5_2_22:41680949-41681714:-|nuORF	27.882242232435846	0.44115667141176046	1				NaN	NaN	0	NaN	418	2657	3074
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3078	14.713	NaN	1278.5	30	0	300.51	0.106	+			5611	AVCKAGAVEK	10	51	516.7799058096709	NaN	0	516.7794799804688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_AVC(Carbamidomethyl (C))KAGAVEK_	ENO1|p.D318Mfs*5|1|0.43|ENSG00000074800|chr1:8864006-8864006|C/-|frameshift_variant;ENSG00000074800|ENST00000234590|ENO1;ENST00000464920.1_1_1:8921421-8930582:-|nuORF;nc|ENSG00000074800|P06733-2|ENO1	72.2432373244024	0.13763297510833816	1				NaN	NaN	0	NaN	419	2657	3074
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3079	14.715	NaN	1327.4	30	0	226.42	0.036			+	11228	FIFLLLFF	8	41	530.3177490234375	NaN	0	530.3177490234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FIFLLLFF_	REV__ENST00000394945.5_1_5:136314095-136314182:-|nuORF	26.79610172149135	1.7418937515398478	1				NaN	NaN	0	NaN	420	2657	3074
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3085	14.731	NaN	1273	30	0	446.6	0.141			+	2309	AMHIFTLG	8	29	445.23562103465656	888.4566891361131	2	445.2352600097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AMHIFTLG_	REV__ENSG00000119041|ENST00000263956|GTF3C3	37.028477286268924	0.6747514403204248	1				NaN	NaN	0	NaN	423	2660	3084
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3091	14.749	NaN	4755.4	30	0	633.88	0.214	+			39375	STDKQTCLK	9	59	512.2602001901315	1022.505847447063	2	512.26123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STDKQTCLK_	ENSG00000198788|ENST00000675028|MUC2;nc|ENSG00000198788|Q02817|MUC2	146.78539889680295	0.007618400906539062	1				NaN	NaN	0	NaN	426	2663	3090
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3092	14.753	NaN	1762.2	30	0	279.51	0.106	+			18777	ITQGKDAAVSK	11	55	559.3142547166507	1116.6139565001013	2	559.3158569335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ITQGKDAAVSK_	ENSG00000140464|ENST00000268058|PML;ENST00000564725.1_1_15:74290377-74317280:+|nuORF;nc|ENSG00000140464|P29590-10|PML;nc|ENSG00000140464|P29590-11|PML;nc|ENSG00000140464|P29590-12|PML;nc|ENSG00000140464|P29590-13|PML;nc|ENSG00000140464|P29590-14|PML;nc|ENSG00000140464|P29590-2|PML;nc|ENSG00000140464|P29590-3|PML;nc|ENSG00000140464|P29590-4|PML;nc|ENSG00000140464|P29590-5|PML;nc|ENSG00000140464|P29590-8|PML;nc|ENSG00000140464|P29590-9|PML	79.07001860377117	0.16012584326255155	1				NaN	NaN	0	NaN	427	2663	3090
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3093	14.755	NaN	4901.3	30	0	416.47	0.037			+	16091	HDEQLELPSC	10	64	585.7599053178141	1169.505257702428	2	586.2628173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HDEQLELPSC_	REV__PEF1|p.P42Lfs*95|1|0.12|ENSG00000162517|chr1:31635422-31635422|G/-|frameshift_variant	71.87747018426188	0.26198133118427214	1				NaN	NaN	0	NaN	428	2663	3090
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3098	14.77	NaN	1014.9	30	0	155.9	0.143	+			22725	KVAVATPAKK	10	41	506.8294392048255	NaN	0	506.8287353515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVAVATPAKK_	ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232323706-232327997:-|nuORF	70.41160668669231	0.14925541935909184	1				NaN	NaN	0	NaN	430	2666	3097
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3108	14.795	NaN	2787.7	30	0	1000.6	0.214	+			22369	KTIDASVSKK	10	47	359.5483500786477	NaN	0	359.5481262207031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTIDASVSKK_	ENSG00000171681|ENST00000261168|ATF7IP;ENST00000535179.1_1_12:14619386-14628955:+|nuORF;ENST00000537653.5_1_12:14576849-14628955:+|nuORF;nc|ENSG00000171681|Q6VMQ6-2|ATF7IP;nc|ENSG00000171681|Q6VMQ6-4|ATF7IP;nc|ENSG00000171681|Q6VMQ6-5|ATF7IP	88.1336951990783	0.06092585671649051	1				NaN	NaN	0	NaN	437	2669	3107
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3109	14.799	NaN	1876.3	30	0	639.33	0.033	+			7491	DGGKIIQQ	8	40	429.7375298243731	857.4605067155462	2	429.73699951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DGGKIIQQ_	ENSG00000113389|ENST00000265074|NPR3;ENST00000506712.1_1_5:32710768-32783175:+|nuORF;nc|ENSG00000113389|P17342-2|NPR3;nc|ENSG00000113389|P17342-3|NPR3	38.80614096846853	0.6637206697844082	1				NaN	NaN	0	NaN	438	2669	3107
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3114	14.813	NaN	1434.7	30	0	244.14	0.215			+	21695	KQFLDYIKQ	9	52	591.827510604258	1181.640468275316	2	591.8284912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KQFLDYIKQ_	REV__ENSG00000138375|ENST00000357276|SMARCAL1	74.1650062923329	0.12277912660386392	1				NaN	NaN	0	NaN	440	2672	3113
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3115	14.817	NaN	1272.3	30	0	248.62	0.106	+			48508	VTNDKLTSK	9	53	503.2822635361962	1004.5499741391924	2	503.2828063964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTNDKLTSK_	ENSG00000135899|ENST00000258381|SP110;ENST00000486146.2_1_2:231068050-231077551:-|nuORF;nc|ENSG00000135899|Q9HB58-3|SP110;nc|ENSG00000135899|Q9HB58-5|SP110;nc|ENSG00000135899|Q9HB58-7|SP110;nc|ENSG00000135899|Q9HB58|SP110	55.08391021199286	0.2545954270840753	1				NaN	NaN	0	NaN	441	2672	3113
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3116	14.819	NaN	546.68	30	0	85.467	0.036				-1	CHKVRCSCG	9	33	553.7341659122839	1105.4537788913676	2	553.7357788085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_CHKVRC(Carbamidomethyl (C))SC(Carbamidomethyl (C))G_	ENST00000547219.5_1_12:69924680-69955961:+|nuORF;ENST00000548154.5_1_12:69924680-69955992:+|nuORF;ENST00000550937.5_1_12:69924683-69951618:+|nuORF	37.15910966729921	0.4535818937225704	1				NaN	NaN	0	NaN	442	2672	3113
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3127	14.852	NaN	4371.5	30	0	1031.5	0.214	+			33069	REKKEESEL	9	65	574.3012588780034	1146.5879648228067	2	574.3012084960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_REKKEESEL_	ENSG00000067082|ENST00000497571|KLF6;nc|ENSG00000067082|Q99612-2|KLF6;nc|ENSG00000067082|Q99612-3|KLF6	66.96192283764107	0.15557981141143568	1				NaN	NaN	0	NaN	447	2678	3126
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3128	14.855	NaN	4532.2	30	0	1148.4	0.106	+			44344	TSGPVTTSK	9	50	439.2345817387118	876.4546105442237	2	439.2347717285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TSGPVTTSK_	ENSG00000197386|ENST00000355072|HTT;ENST00000510626.5_1_4:3131970-3189635:+|nuORF;HTT|p.H2238Ffs*6|1|0.28|ENSG00000197386|chr4:3212643-3212644|CA/-|frameshift_variant;HTT|p.P2413Hfs*44|1|0.6|ENSG00000197386|chr4:3217944-3217944|C/-|frameshift_variant	85.16082228582465	0.07850854922700509	1				NaN	NaN	0	NaN	448	2678	3126
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3129	14.857	NaN	3446.5	30	0	1470	0.037			+	-1	LWALRCSEL	9	32	383.20300804322244	1146.5871947298674	3	383.5378112792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LWALRC(Carbamidomethyl (C))SEL_	REV__ENST00000437807.6_1_17:80403796-80407048:-|nuORF	27.882242232435846	0.5426732730940306	1				NaN	NaN	0	NaN	449	2678	3126
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3140	14.892	NaN	17286	30	0	3193.4	0.143	+			6337	AVTKYTSSK	9	76	492.7715101100924	983.5284672869848	2	492.77197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVTKYTSSK_	ENSG00000146047|ENST00000274764|H2BC1;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000196890|ENST00000693095|H2BC26;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000436555.1_1_1:228651916-228652012:-|nuORF;nc|ENSG00000203814|Q5QNW6-2|H2BC18;nc|ENSG00000285480|A0A2R8Y619|H2BK1	160.8219353732433	0.004346709298329381	1				NaN	NaN	0	NaN	454	2684	3139
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3149	14.916	NaN	2810.7	30	0	383.52	0.214	+			43116	TEREQKNSL	9	57	552.7854502082639	1103.5563474833277	2	552.785400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEREQKNSL_	BICD2|p.R258C|1|0.42|ENSG00000185963|chr9:92720590-92720590|G/A|missense_variant;ENSG00000185963|ENST00000356884|BICD2;nc|ENSG00000185963|Q8TD16|BICD2	84.81729255234993	0.07947707105691067	1				NaN	NaN	0	NaN	460	2687	3148
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3150	14.92	NaN	2035.4	30	0	336.97	0.035			+	40650	SVAQVGAKLK	10	47	500.81065631506425	999.6067596969285	2	500.8115539550781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVAQVGAKLK_	REV__ENST00000380995.5_1_22:47569631-47570030:+|nuORF	83.6470233535746	0.16744595502813267	1				NaN	NaN	0	NaN	461	2687	3148
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3160	14.943	NaN	860.43	30	0	228.21	0.214			+	31532	QLKRIHGT	8	38	476.7879943847656	NaN	0	476.7879943847656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QLKRIHGT_	REV__ENSG00000137877|ENST00000320955|SPTBN5;REV__SPTBN5|p.A3297Gfs*48|1|0.56|ENSG00000137877|chr15:41853672-41853673|-/C|frameshift_variant;REV__SPTBN5|p.G2751Afs*60|1|0.08|ENSG00000137877|chr15:41857685-41857685|C/-|frameshift_variant;REV__SPTBN5|p.R482Afs*7|1|0.21|ENSG00000137877|chr15:41885811-41885812|-/C|frameshift_variant	25.450171626174864	1.7418937515398478	1				NaN	NaN	0	NaN	468	2690	3159
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3161	14.947	NaN	1866.5	30	0	222.6	0.106	+			8466	EASGVKEKG	9	53	452.7404334458191	NaN	0	452.74005126953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EASGVKEKG_	ENSG00000189350|ENST00000379558|TOGARAM2	49.44154591367651	0.21054156626303966	1				NaN	NaN	0	NaN	469	2690	3159
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3162	14.949	NaN	303.27	30	0	44.913	0.032			+	30996	QESALPGI	8	19	407.71826171875	NaN	0	407.71826171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QESALPGI_	REV__ENSG00000184988|ENST00000612339|TMEM106A;REV__nc|ENSG00000184988|Q96A25-2|TMEM106A	20.481830146152948	1.741893751539848	1				NaN	NaN	0	NaN	470	2690	3159
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3173	14.974	NaN	9122.6	30	0	2180.5	0.214			+	-1	DESPGTTR	8	67	452.7045284804267	903.3945040276534	2	452.7041931152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))DESPGTTR_	REV__ENSG00000120256|ENST00000239367|LRP11;REV__LRP11|p.A362S|1|0.46|ENSG00000120256|chr6:149836253-149836253|C/A|missense_variant	44.116797842482775	0.6307669463330267	1				NaN	NaN	0	NaN	478	2693	3172
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3174	14.978	NaN	10069	30	0	5422.6	0.039	+			43615	TINGHNAEVRK	11	52	413.5580514740248	1237.6523250222745	3	413.5578918457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TINGHNAEVRK_	ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;ENST00000495810.1_1_7:26235422-26236427:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1	68.78561909154949	0.24586362119257035	1				NaN	NaN	0	NaN	479	2693	3172
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3186	15.003	NaN	2111.7	30	0	401.15	0.214			+	20904	KISVPPKQH	9	43	517.3115592248034	1032.6085655164068	2	517.3129272460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KISVPPKQH_	REV__ENSG00000089775|ENST00000608382|ZBTB25;REV__ZBTB25|p.E245Gfs*4|1|0.2|ENSG00000089775|chr14:64487497-64487498|-/C|frameshift_variant	35.61828744233558	0.47037581924408073	1				NaN	NaN	0	NaN	488	2696	3185
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3187	15.007	NaN	1011	30	0	140.29	0.035			+	6821	CHLRSRCE	8	49	502.2300720214844	NaN	0	502.2300720214844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_CHLRSRCE_	REV__ENST00000586479.1_1_19:11462501-11464130:+|nuORF;REV__ENST00000588464.5_1_19:11462501-11464249:+|nuORF	24.20275056022122	1.7418937515398478	1				NaN	NaN	0	NaN	489	2696	3185
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3192	15.022	NaN	2610	30	0	421.74	0.144	+			42955	TEKAKEERL	9	45	552.3059005721573	1102.5972482111144	2	552.3085327148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEKAKEERL_	ENSG00000149503|ENST00000394818|INCENP;INCENP|p.E620D|1|0.06|ENSG00000149503|chr11:62145652-62145652|G/T|missense_variant;nc|ENSG00000149503|Q9NQS7-2|INCENP	68.84614121027924	0.14577793175421136	1				NaN	NaN	0	NaN	491	2699	3191
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3198	15.041	NaN	5420.8	30	0	1468.7	0.214	+			50751	YEKKAAKL	8	58	475.7870340274819	949.5595151217639	2	475.7865905761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YEKKAAKL_	ENSG00000189403|ENST00000341423|HMGB1;nc|ENSG00000067066|P23497|SP100	77.31757898189308	0.345924878368729	1				NaN	NaN	0	NaN	494	2702	3197
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3199	15.044	NaN	2904.7	30	0	714.11	0.106	+			39754	STITKIHSK	9	57	507.80025763827115	1013.5859623433423	2	507.80084228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STITKIHSK_	ENSG00000138593|ENST00000559471|SECISBP2L;nc|ENSG00000138593|Q93073-2|SECISBP2L	114.8945686534367	0.024290463251177924	1				NaN	NaN	0	NaN	495	2702	3197
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3200	15.046	NaN	2472.7	30	0	1084.8	0.106			+	-1	VVDFVKMAK	9	29	351.5331425263753	NaN	0	351.53326416015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_VVDFVKM(Oxidation (M))AK_	REV__ENSG00000113593|ENST00000261308|PPWD1	25.57405402267927	0.3484490411150625	1				NaN	NaN	0	NaN	496	2702	3197
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3201	15.048	NaN	2627.3	30	0	688.23	0.036			+	4990	ATRSVAVVSQ	10	46	339.85981659341655	NaN	0	339.52618408203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATRSVAVVSQ_	REV__AGL|p.K1407Nfs*8|1|0.39|ENSG00000162688|chr1:99915441-99915441|A/-|frameshift_variant;REV__AGL|p.N1304Ifs*10|1|0.38|ENSG00000162688|chr1:99912472-99912472|A/-|frameshift_variant;REV__AGL|p.N1304Kfs*7|1|0.38|ENSG00000162688|chr1:99912471-99912472|-/A|frameshift_variant;REV__ENSG00000162688|ENST00000361915|AGL;REV__nc|ENSG00000162688|P35573-2|AGL;REV__nc|ENSG00000162688|P35573-3|AGL	31.634271133179894	0.39630454568332174	1				NaN	NaN	0	NaN	497	2702	3197
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3214	15.086	NaN	2404.7	30	0	252.87	0.143	+			2659	AQNAKVIEK	9	58	500.79311564281494	999.5716783524299	2	501.29498291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AQNAKVIEK_	ENSG00000018610|ENST00000644802|STEEP1;ENST00000469448.1_1_X:118673692-118676584:-|nuORF;nc|ENSG00000018610|Q9H5V9-2|STEEP1;nc|ENSG00000018610|Q9H5V9-3|STEEP1	83.6470233535746	0.08277643980271215	1				NaN	NaN	0	NaN	504	2708	3213
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3220	15.104	NaN	1796.3	30	0	609.79	0.214			+	22856	KVKEERTAG	9	53	509.28788932945537	1016.5612257257108	2	509.2894592285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVKEERTAG_	REV__ENSG00000007174|ENST00000262442|DNAH9;REV__nc|ENSG00000007174|Q9NYC9-2|DNAH9;REV__nc|ENSG00000007174|Q9NYC9-3|DNAH9	54.722347961057174	0.257609425301511	1				NaN	NaN	0	NaN	507	2711	3219
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3221	15.107	NaN	2833	30	0	574.97	0.106	+			19316	KAGWRRVQ	8	47	334.1978131238164	999.5716099716492	3	334.1980285644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KAGWRRVQ_	ENST00000302472.3_1_5:40680399-40680531:+|nuORF	35.200714571348534	0.6875396545722289	1				NaN	NaN	0	NaN	508	2711	3219
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3222	15.109	NaN	15635	30	0	5371.5	0.106				-1	MGVLAKSKCP	10	41	364.196053020111	1089.566329660533	3	364.530517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_MGVLAKSKC(Carbamidomethyl (C))P_	ENSG00000166788|ENST00000524803|SAAL1;ENST00000530736.1_1_11:18115485-18127588:-|nuORF;ENST00000533851.5_1_11:18111045-18127588:-|nuORF	18.262085536374414	0.7236521404371882	1				NaN	NaN	0	NaN	509	2711	3219
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3223	15.111	NaN	871.71	30	0	146.65	0.034			+	2575	AQEAPLEGT	9	39	458.22435615232416	NaN	0	458.22442626953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AQEAPLEGT_	REV__USP9X|p.N1480T|1|0.17|ENSG00000124486|chrX:41198586-41198586|A/C|missense_variant	31.954861631926434	0.3162336699109506	1				NaN	NaN	0	NaN	510	2711	3219
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3234	15.136	NaN	3018.5	30	0	522.02	0.214			+	7733	DLTQVPEPR	9	44	352.1888688585802	NaN	0	352.1890869140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DLTQVPEPR_	REV__ENSG00000123154|ENST00000418543|WDR83	20.94693142431847	0.3660861156085067	1				NaN	NaN	0	NaN	518	2714	3233
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3235	15.14	NaN	1268.9	30	0	92.756	0.034			+	25959	LSIKNTGSP	9	47	458.7586631010568	915.5027732689136	2	458.7584228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSIKNTGSP_	REV__tr|U7T2Q5|U7T2Q5_FUSNUCrossoverjunctionendodeoxyribonucleaseRuvCOS=FusobacteriumnucleatumCTI-5OX=1316586GN=ruvCPE=3SV=1	74.25504064058377	0.12238981753128622	1				NaN	NaN	0	NaN	519	2714	3233
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3243	15.16	NaN	22585	30	0	6963.4	0.214	+			44585	TTCSKVFKK	9	74	366.87037508306395	1097.5892958493919	3	366.8709716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_TTC(Carbamidomethyl (C))SKVFKK_	ENSG00000167625|ENST00000301215|ZNF526	88.17693792209575	0.07000514020414955	1				NaN	NaN	0	NaN	524	2717	3242
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3244	15.163	NaN	6985.5	30	0	2222.3	0.037			+	47808	VSKAPRFMLG	10	39	374.5436039611187	NaN	0	374.87664794921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_VSKAPRFM(Oxidation (M))LG_	REV__ENST00000280663.12_1_12:1902823-1909126:-|nuORF	40.05817265558897	0.3684561582319974	1				NaN	NaN	0	NaN	525	2717	3242
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3257	15.191	NaN	51946	30	0	5733.2	0.214	+			30917	QELEKAKR	8	85	501.29066951941604	1000.5667861056321	2	501.290283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QELEKAKR_	ENSG00000133026|ENST00000360416|MYH10;ENST00000465458.1_1_17:8409499-8413222:-|nuORF;nc|ENSG00000133026|P35580-2|MYH10;nc|ENSG00000133026|P35580-3|MYH10;nc|ENSG00000133026|P35580-5|MYH10;nc|ENSG00000133026|P35580|MYH10	104.0567914643314	0.248440647781298	1				NaN	NaN	0	NaN	535	2720	3256
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3258	15.194	NaN	1481.3	30	0	598.17	0.106			+	31239	QHDQTQGQTQQ	11	30	649.788546172488	1297.562539411776	2	649.7896728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QHDQTQGQTQQ_	REV__MAGEB3|p.R19Q|1|0.13|ENSG00000198798|chrX:30235980-30235980|G/A|missense_variant	26.063383197487333	0.7164075632144343	1				NaN	NaN	0	NaN	536	2720	3256
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3259	15.196	NaN	2760.9	30	0	1341.9	0.106			+	-1	SLEKMLMKEK	10	39	423.55728652776054	1267.6500301834817	3	423.89190673828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Oxidation (M)	_SLEKM(Oxidation (M))LM(Oxidation (M))KEK_	REV__ENSG00000151838|ENST00000537690|CCDC175	41.42661286455405	0.5359995577334734	1				NaN	NaN	0	NaN	537	2720	3256
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3260	15.198	NaN	2095.6	30	0	1055.4	0.106	+			9287	EHLVWQILAN	10	29	408.2227038898878	NaN	0	408.222412109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EHLVWQILAN_	ADCY2|p.R914Sfs*9|1|0.46|ENSG00000078295|chr5:7802326-7802327|-/T|frameshift_variant;ENSG00000078295|ENST00000338316|ADCY2	29.170058357718403	0.40439580130713204	1				NaN	NaN	0	NaN	538	2720	3256
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3261	15.2	NaN	740.56	30	0	313.16	0.033	+			9000	EFYNNIQRTAS	11	26	448.2173434938769	NaN	0	448.2170104980469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EFYNNIQRTAS_	ENST00000533836.1_1_1:52522019-52536962:+|nuORF	22.561587123415745	0.456735970842152	1				NaN	NaN	0	NaN	539	2720	3256
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3273	15.226	NaN	1404.8	30	0	517.94	0.214	+			15553	GVFKETKQK	9	40	355.5415954589844	NaN	0	355.5415954589844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVFKETKQK_	ENSG00000119927|ENST00000348367|GPAM	30.503639358989545	0.3235605894931338	1				NaN	NaN	0	NaN	548	2723	3272
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3274	15.229	NaN	817.09	30	0	348.85	0.106			+	50587	YDDDTTIIGI	10	35	563.2676372699606	1124.520721606721	2	563.2684326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YDDDTTIIGI_	REV__ENSG00000173612|ENST00000310357|GPRC6A;REV__GPRC6A|p.L564Vfs*14|1|0.08|ENSG00000173612|chr6:116793233-116793234|-/TATTTAC|frameshift_variant;REV__GPRC6A|p.V453Lfs*6|1|0.08|ENSG00000173612|chr6:116800775-116800776|-/TAAG|frameshift_variant;REV__nc|ENSG00000173612|Q5T6X5-2|GPRC6A;REV__nc|ENSG00000173612|Q5T6X5-3|GPRC6A	23.04248740728303	0.69165701907106	1				NaN	NaN	0	NaN	549	2723	3272
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3275	15.231	NaN	1220.5	30	0	204.11	0.106	+			18082	IKLVCQMNL	9	35	531.2970581054688	NaN	0	531.2970581054688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IKLVCQMNL_	ENST00000415659.2_1_5:122364834-122372365:-|nuORF	19.996771675451527	0.3693019437812985	1				NaN	NaN	0	NaN	550	2723	3272
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3276	15.233	NaN	5674.8	30	0	691.35	0.106	+			34095	RSQKPVMVK	9	66	536.8182979961413	1071.6220430590824	2	536.8191528320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RSQKPVMVK_	ENSG00000108107|ENST00000344063|RPL28;ENST00000412461.2_1_22:19043875-19044022:+|nuORF;ENST00000560583.5_1_19:55899571-55899697:+|nuORF	79.48907831485694	0.09975780661107167	1				NaN	NaN	0	NaN	551	2723	3272
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3277	15.235	NaN	2436	30	0	1375.8	0.106	+			30119	PRPSPASSPK	10	45	512.2814048789326	1022.5482568246651	2	512.2825317382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PRPSPASSPK_	ENSG00000136378|ENST00000388820|ADAMTS7	29.170058357718403	0.6416167986984785	1				NaN	NaN	0	NaN	552	2723	3272
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3278	15.236	NaN	1818.1	30	0	290.51	0.106			+	-1	HRCEELQQ	8	31	550.2513282088445	1098.4881034844889	2	550.2523193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_HRC(Carbamidomethyl (C))EELQQ_	REV__DNHD1|p.S3597Rfs*6|1|0.1|ENSG00000179532|chr11:6565718-6565719|-/AG|frameshift_variant;REV__DNHD1|p.T4259Pfs*33|2|0.33|ENSG00000179532|chr11:6568772-6568772|C/-|frameshift_variant;REV__ENSG00000179532|ENST00000254579|DNHD1	34.172542307311794	0.6954784234644539	1				NaN	NaN	0	NaN	553	2723	3272
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3279	15.238	NaN	11784	30	0	6389.8	0.034	+			5219	ATTTTVTTK	9	55	462.25564911987226	922.4967453065445	2	462.256103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATTTTVTTK_	ENSG00000163349|ENST00000426820|HIPK1;HIPK1|p.N462*|1|0.27|ENSG00000163349|chr1:113955620-113955621|-/T|frameshift_variant;nc|ENSG00000163349|Q86Z02-2|HIPK1	78.26377905018397	0.10505600812668463	1				NaN	NaN	0	NaN	554	2723	3272
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3290	15.263	NaN	2122.2	30	0	519.7	0.214	+			33541	RLDRRDEA	8	45	515.7730169017497	1029.5314808702992	2	515.773681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RLDRRDEA_	ENSG00000221829|ENST00000378643|FANCG	38.80614096846853	0.6637206697844082	1				NaN	NaN	0	NaN	562	2726	3289
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3291	15.267	NaN	3857.8	30	0	1268	0.106	+			33456	RIQEHFNKK	9	51	400.55929130460373	1198.6560445140112	3	400.5597229003906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RIQEHFNKK_	ENSG00000157349|ENST00000288071|DDX19B;ENSG00000168872|ENST00000302243|DDX19A;ENST00000569319.5_1_16:70399881-70405886:+|nuORF;ENST00000569771.5_1_16:70395504-70405886:+|nuORF;nc|ENSG00000168872|Q9NUU7-2|DDX19A;nc|ENSG00000260537|Q9UMR2-2|DDX19B;nc|ENSG00000260537|Q9UMR2-3|DDX19B;nc|ENSG00000260537|Q9UMR2-4|DDX19B	52.936696900407355	0.27249468807391813	1				NaN	NaN	0	NaN	563	2726	3289
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3292	15.268	NaN	451.02	30	0	46.161	0.106			+	21792	KQVKTQVR	8	30	493.80859375	NaN	0	493.80859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KQVKTQVR_	REV__nc|ENSG00000228970|P0CB48|UBTFL6	15.641811463095205	1.7418937515398478	1				NaN	NaN	0	NaN	564	2726	3289
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3293	15.27	NaN	3273.2	30	0	514.34	0.106	+			2919	ASCNQTLSK	9	61	504.74201288204745	1007.4694728308949	2	504.7421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_ASC(Carbamidomethyl (C))NQTLSK_	ENSG00000155256|ENST00000684270|ZFYVE27;ENST00000477521.5_1_10:99516996-99519054:+|nuORF;nc|ENSG00000155256|Q5T4F4-2|ZFYVE27;nc|ENSG00000155256|Q5T4F4-3|ZFYVE27;nc|ENSG00000155256|Q5T4F4-5|ZFYVE27;nc|ENSG00000155256|Q5T4F4-6|ZFYVE27;nc|ENSG00000155256|Q5T4F4-7|ZFYVE27;nc|ENSG00000155256|Q5T4F4-8|ZFYVE27	114.85826248499774	0.024312442104607014	1				NaN	NaN	0	NaN	565	2726	3289
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3294	15.272	NaN	1078.4	30	0	583.26	0.032	+			7510	DGLTALHV	8	23	413.2268961334772	NaN	0	413.22686767578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DGLTALHV_	ENSG00000069399|ENST00000164227|BCL3;ENST00000403534.7_1_19:45250964-45261799:+|nuORF	20.481830146152948	1.741893751539848	1				NaN	NaN	0	NaN	566	2726	3289
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3306	15.297	NaN	1122.1	30	0	157.46	0.214	+			21051	KKKSSKQAE	9	36	517.3046264648438	NaN	0	517.3046264648438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KKKSSKQAE_	L1MEc_dup13396|chr12:12101391-12102664:+|1.620703183190708|0.1673385782039856|3.28|479.0|15|1|sense	36.446750945000026	0.29355505452396785	1				NaN	NaN	0	NaN	575	2729	3305
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3307	15.301	NaN	11488	30	0	2984.6	0.106	+			29480	PCRTSRVRQ	9	44	368.2010953574268	1101.5814566724805	3	368.2012939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PCRTSRVRQ_	ENST00000394951.5_1_16:31123619-31123802:+|nuORF	34.172542307311794	0.4838870758800184	1				NaN	NaN	0	NaN	576	2729	3305
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3308	15.303	NaN	1694.1	30	0	722.17	0.036				-1	ATVDKTVCK	9	23	341.183447938865	NaN	0	341.1837463378906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_ATVDKTVC(Carbamidomethyl (C))K_	ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1670Tfs*23|1|0.29|ENSG00000174231|chr17:1659487-1659487|C/-|frameshift_variant	24.519189625965996	0.35377483217337163	1				NaN	NaN	0	NaN	577	2729	3305
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3317	15.323	NaN	10058	30	0	4788.6	0.214			+	33941	RSAKSIFNK	9	51	350.87321069527485	1049.5978026860246	3	350.87335205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RSAKSIFNK_	REV__ENSG00000136161|ENST00000344532|RCBTB2;REV__nc|ENSG00000136161|O95199-2|RCBTB2	44.116797842482775	0.37197099687881774	1				NaN	NaN	0	NaN	583	2732	3316
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3318	15.327	NaN	3761.7	30	0	759.66	0.106	+			2856	ASAPANVSK	9	49	422.72968626444725	843.4448195956945	2	422.7298583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASAPANVSK_	ENSG00000135597|ENST00000450536|REPS1;nc|ENSG00000135597|Q96D71-2|REPS1;nc|ENSG00000135597|Q96D71-3|REPS1;nc|ENSG00000135597|Q96D71-4|REPS1	72.2432373244024	0.13108886737667413	1				NaN	NaN	0	NaN	584	2732	3316
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3319	15.328	NaN	3108.7	30	0	1563.5	0.106			+	411	AASTTTVATG	10	44	440.22486835446847	NaN	0	440.2254638671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AASTTTVATG_	REV__ENSG00000003756|ENST00000347869|RBM5;REV__ENST00000441812.6_1_3:50144918-50150831:+|nuORF;REV__ENST00000489437.1_1_3:50144918-50148299:+|nuORF;REV__ENST00000494360.5_1_3:50144211-50147205:+|nuORF;REV__RBM5|p.E524Rfs*28|1|0.12|ENSG00000003756|chr3:50113493-50113493|A/-|frameshift_variant	35.61828744233558	0.3832230071539346	1				NaN	NaN	0	NaN	585	2732	3316
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3320	15.33	NaN	1302.5	30	0	346.19	0.034	+			4595	ATLHGSNMK	9	36	479.7421389589068	NaN	0	479.7416687011719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATLHGSNMK_	ENSG00000198804|ENST00000361624|MT-CO1;L1PA6_dup546|chr2:49227587-49231532:-|4.547726375381561|0.2927699401366612|3.96|483.0|61|2|sense	47.657333605630114	0.2228375344433429	1				NaN	NaN	0	NaN	586	2732	3316
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3326	15.347	NaN	9363.4	30	0	1734.5	0.145	+			41599	SVQHVDAAEK	10	70	542.2745859540684	1082.5346189749366	2	542.2763061523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVQHVDAAEK_	ENST00000585682.5_1_4:159092526-159092595:-|nuORF	139.15298810987372	0.010979919232517382	1				NaN	NaN	0	NaN	589	2735	3325
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3336	15.372	NaN	2537.3	30	0	610.32	0.214	+			37839	SNGRAGYSQQ	10	48	534.2465224717758	1066.4784920103516	2	534.2469482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SNGRAGYSQQ_	ENSG00000164031|ENST00000442697|DNAJB14;ENST00000567680.1_1_15:66063956-66064049:-|nuORF;nc|ENSG00000164031|Q8TBM8-2|DNAJB14	51.19269402634007	0.44601001148513897	1				NaN	NaN	0	NaN	596	2738	3335
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3337	15.376	NaN	631.73	30	0	79.998	0.031				-1	 	0	32	360.728759765625	NaN	0	360.728759765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	597	2738	3335
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3345	15.396	NaN	149.05	30	0	18.769	0.143	+			50214	WMVWVLGV	8	14	495.26727294921875	NaN	0	495.26727294921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WMVWVLGV_	ENSG00000137462|ENST00000642700|TLR2;TLR2|p.S240Ffs*7|1|0.41|ENSG00000137462|chr4:153703620-153703621|-/T|frameshift_variant	10.184766708764876	1.7418937515398478	1				NaN	NaN	0	NaN	602	2741	3344
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3352	15.416	NaN	1816.3	30	0	262.81	0.142	+			7252	DALRLLQT	8	36	465.27433989665786	928.5341268601157	2	465.2740478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DALRLLQT_	ENSG00000136522|ENST00000476781|MRPL47;nc|ENSG00000136522|Q9HD33-2|MRPL47;nc|ENSG00000136522|Q9HD33-3|MRPL47	51.33545320467046	0.5859736979383976	1				NaN	NaN	0	NaN	606	2744	3351
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3368	15.46	NaN	1126.4	30	0	262.41	0.145				-1	YICGGKSSTY	10	43	568.2606957736182	NaN	0	568.2606201171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_YIC(Carbamidomethyl (C))GGKSSTY_	ENST00000519765.1_1_8:101163583-101163667:+|nuORF	26.69291269510374	0.4125295221340092	1				NaN	NaN	0	NaN	616	2750	3367
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3375	15.481	NaN	10114	30	0	2874.3	0.214	+			5300	ATVKLEHAK	9	53	332.86602240347867	995.576237810636	3	332.86614990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATVKLEHAK_	ENSG00000118705|ENST00000237530|RPN2;nc|ENSG00000118705|P04844-2|RPN2	35.15202426646627	0.4747332964206883	1				NaN	NaN	0	NaN	620	2753	3374
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3376	15.485	NaN	7833.1	30	0	1011.8	0.041			+	50342	WVFWVADCACL	11	61	457.20797744885397	1368.602102946762	3	457.20770263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_WVFWVADCAC(Carbamidomethyl (C))L_	REV__TLR7|p.T788A|1|0.63|ENSG00000196664|chrX:12887870-12887870|A/G|missense_variant	53.08895987439943	0.38514566451266113	1				NaN	NaN	0	NaN	621	2753	3374
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3398	15.538	NaN	1692.1	30	0	298.17	0.214			+	22746	KVCTGPKSAV	10	51	523.7854627385351	1045.55637254387	2	523.7868041992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_KVC(Carbamidomethyl (C))TGPKSAV_	REV__ABTB1|p.E252Sfs*102|1|0.29|ENSG00000114626|chr3:127677272-127677272|C/-|frameshift_variant;REV__ABTB1|p.P318Qfs*36|2|0.4|ENSG00000114626|chr3:127677762-127677762|C/-|frameshift_variant;REV__ENSG00000114626|ENST00000232744|ABTB1;REV__nc|ENSG00000114626|Q969K4-2|ABTB1;REV__nc|ENSG00000114626|Q969K4-3|ABTB1;REV__nc|ENSG00000114626|Q969K4-4|ABTB1	54.776311868738084	0.41334902933431344	1				NaN	NaN	0	NaN	637	2759	3397
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3399	15.542	NaN	1282.6	30	0	381.18	0.106	+			18914	IVNASTTNK	9	42	474.26141357421875	NaN	0	474.26141357421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IVNASTTNK_	ENSG00000078269|ENST00000355585|SYNJ2;nc|ENSG00000078269|O15056-2|SYNJ2;nc|ENSG00000078269|O15056-3|SYNJ2;SYNJ2|p.L1226Tfs*32|1|0.22|ENSG00000078269|chr6:158093029-158093030|-/C|frameshift_variant;SYNJ2|p.P1225Hfs*19|1|0.23|ENSG00000078269|chr6:158093030-158093030|C/-|frameshift_variant	51.19269402634007	0.19847346126499396	1				NaN	NaN	0	NaN	638	2759	3397
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3400	15.544	NaN	1842.8	30	0	242.01	0.035	+			30918	QELEKAKR	8	54	501.29066951941604	1000.5667861056321	2	501.29119873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QELEKAKR_	ENSG00000133026|ENST00000360416|MYH10;ENST00000465458.1_1_17:8409499-8413222:-|nuORF;nc|ENSG00000133026|P35580-2|MYH10;nc|ENSG00000133026|P35580-3|MYH10;nc|ENSG00000133026|P35580-5|MYH10;nc|ENSG00000133026|P35580|MYH10	82.7504851949679	0.3006553482314138	1				NaN	NaN	0	NaN	639	2759	3397
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3410	15.566	NaN	36667	30	0	6980.5	0.214	+			39060	SSSRAVVVK	9	68	466.7795535001709	931.5445540671418	2	466.779541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSSRAVVVK_	CON__H-INV:HIT000292931;CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	82.7504851949679	0.08565546331141553	1				NaN	NaN	0	NaN	646	2762	3409
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3411	15.569	NaN	2811	30	0	388.07	0.036	+			39124	SSTVATRPQK	10	60	537.7983309021729	1073.5821088711457	2	537.8015747070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSTVATRPQK_	ENSG00000160401|ENST00000373295|CFAP157	56.43379154798735	0.3982744522255666	1				NaN	NaN	0	NaN	647	2762	3409
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3423	15.595	NaN	803.98	30	0	143.93	0.214				-1	MIMGIIQQ	8	44	483.2437744140625	NaN	0	483.2437744140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_M(Oxidation (M))IM(Oxidation (M))GIIQQ_	ENSG00000150961|ENST00000280551|SEC24D;nc|ENSG00000150961|O94855-2|SEC24D;SEC24D|p.P982Q|1|0.14|ENSG00000150961|chr4:118728574-118728574|G/T|missense_variant	54.76467175910256	1.7418937515398478	1				NaN	NaN	0	NaN	656	2765	3422
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3424	15.599	NaN	731.1	30	0	77.184	0.034	+			16564	HFGVHPAPG	9	44	459.7308044433594	NaN	0	459.7308044433594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HFGVHPAPG_	ENSG00000180667|ENST00000315927|YOD1	49.21078951299608	0.21213183292994464	1				NaN	NaN	0	NaN	657	2765	3422
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3430	15.615	NaN	1360.7	30	0	204.06	0.214			+	21978	KSELPMELK	9	51	537.7983309021729	1073.5821088711457	2	537.79443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSELPMELK_	REV__ENSG00000132952|ENST00000255304|USPL1	45.97224482568171	0.3502073465782774	1				NaN	NaN	0	NaN	660	2768	3429
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3431	15.619	NaN	2898.8	30	0	900.69	0.035	+			42343	TAHDQKTAL	9	51	492.7589293591861	983.5033057851722	2	492.7589111328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAHDQKTAL_	ENSG00000142875|ENST00000370685|PRKACB	75.04331003522576	0.118981335847003	1				NaN	NaN	0	NaN	661	2768	3429
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3440	15.641	NaN	3892.3	30	0	1511.9	0.146			+	40973	SVGHTVNRILG	11	39	384.88734521440006	1151.6402062434001	3	384.8876037597656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVGHTVNRILG_	REV__ENSG00000048707|ENST00000620676|VPS13D;REV__nc|ENSG00000048707|Q5THJ4-2|VPS13D	27.047317107675042	0.7060868989289394	1				NaN	NaN	0	NaN	667	2771	3439
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3445	15.658	NaN	14011	30	0	2437.8	0.214	+			6328	AVTKYTSAK	9	72	484.77400069631335	967.5334484594267	2	484.7740478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVTKYTSAK_	ENSG00000124635|ENST00000339812|H2BC11;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000234289|ENST00000599962|H2BC12L	190.62248201133156	0.00022967542297918066	1				NaN	NaN	0	NaN	669	2774	3444
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3446	15.661	NaN	1066.9	30	0	318.14	0.035	+			28360	NEKSDTHTL	9	35	522.7514246015385	NaN	0	522.7515258789062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NEKSDTHTL_	ENSG00000116237|ENST00000343813|ICMT	54.722347961057174	0.17414871455573902	1				NaN	NaN	0	NaN	670	2774	3444
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3455	15.682	NaN	14428	30	0	7586.3	0.145	+			40702	SVCEGKGLHR	10	46	381.52904361862215	1141.5653014560664	3	381.5290832519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SVC(Carbamidomethyl (C))EGKGLHR_	ENSG00000161011|ENST00000389805|SQSTM1;ENST00000466342.1_1_5:179250916-179260288:+|nuORF;nc|ENSG00000161011|Q13501-2|SQSTM1	74.1650062923329	0.2432923583094885	1				NaN	NaN	0	NaN	676	2777	3454
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3471	15.726	NaN	3999.9	30	0	1121	0.214			+	-1	SLIFMIGLWK	10	41	408.5663698897806	1222.6772802695418	3	408.566650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_SLIFM(Oxidation (M))IGLWK_	REV__tr|U7T4Y7|U7T4Y7_FUSNUPeptide/nickeltransportsystempermeaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00608PE=3SV=1	26.063383197487333	0.6669871633831898	1				NaN	NaN	0	NaN	686	2783	3470
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3472	15.73	NaN	675.87	30	0	141.71	0.038				-1	MGKLIRMGPQ	10	33	402.2103576660156	NaN	0	402.2103576660156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term),2 Oxidation (M)	_(Acetyl (Protein N-term))M(Oxidation (M))GKLIRM(Oxidation (M))GPQ_	ENSG00000074621|ENST00000261892|SLC24A1;ENST00000434116.6_1_15:65916409-65944223:+|nuORF;nc|ENSG00000074621|O60721-2|SLC24A1;nc|ENSG00000074621|O60721-3|SLC24A1;SLC24A1|p.N798Mfs*24|1|0.04|ENSG00000074621|chr15:65650539-65650539|A/-|frameshift_variant	22.579656572578934	0.4201028297492154	1				NaN	NaN	0	NaN	687	2783	3470
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3480	15.749	NaN	4160.9	30	0	707	0.214	+			21316	KLTEVLNR	8	57	486.7953112447941	971.5760695563882	2	486.7958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KLTEVLNR_	ENSG00000115970|ENST00000405975|THADA;ENST00000408045.7_1_2:43571220-43805671:-|nuORF;nc|ENSG00000115970|Q6YHU6-2|THADA;nc|ENSG00000115970|Q6YHU6-3|THADA	47.657333605630114	0.6087971902037268	1				NaN	NaN	0	NaN	692	2786	3479
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3481	15.752	NaN	4536.6	30	0	742.98	0.106	+			1053	AEKREHEKEVL	11	49	456.58095235193207	1366.7210276559963	3	456.5812072753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEKREHEKEVL_	ENSG00000117632|ENST00000455785|STMN1;ENST00000465604.1_1_1:26227509-26228203:-|nuORF;ENST00000485226.1_1_1:26227942-26230296:-|nuORF;nc|ENSG00000117632|P16949-2|STMN1	66.96192283764107	0.2613103798769313	1				NaN	NaN	0	NaN	693	2786	3479
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3482	15.754	NaN	773.12	30	0	171.22	0.033	+			25777	LSALLAEW	8	27	451.75081860846507	901.4870842837302	2	451.75140380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSALLAEW_	ENST00000562782.1_1_16:89180808-89181345:-|nuORF	31.954861631926434	0.7126016770032289	1				NaN	NaN	0	NaN	694	2786	3479
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3490	15.773	NaN	1264.3	30	0	327.15	0.141	+			36705	SGSGESSGIT	10	26	441.1967474454737	880.3789419577474	2	441.1968688964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SGSGESSGIT_	ACAN|p.P2306Lfs*10|1|0.42|ENSG00000157766|chr15:88860405-88860405|C/-|frameshift_variant;ENSG00000157766|ENST00000560601|ACAN;nc|ENSG00000157766|P16112-2|ACAN;nc|ENSG00000157766|P16112-3|ACAN;nc|ENSG00000157766|P16112|ACAN	40.77816245573522	0.5419747034533848	1				NaN	NaN	0	NaN	699	2789	3489
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3501	15.801	NaN	10636	30	0	6910.4	0.214			+	-1	SVSLPMGLLS	10	35	340.52059722081674	1018.5399622626503	3	340.5210266113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_SVSLPM(Oxidation (M))GLLS_	REV__ENST00000570923.1_1_17:78185753-78194107:-|nuORF;REV__ENST00000575282.5_1_17:78185753-78186503:-|nuORF	35.15202426646627	0.5927656479315102	1				NaN	NaN	0	NaN	707	2792	3500
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3502	15.804	NaN	756.67	30	0	102.24	0.106	+			21537	KNSSKAAQ	8	34	417.22731766311546	832.4400823930309	2	417.2275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KNSSKAAQ_	ENSG00000144218|ENST00000672756|AFF3;nc|ENSG00000144218|P51826-2|AFF3	42.396135135203025	0.6414440140393314	1				NaN	NaN	0	NaN	708	2792	3500
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3503	15.806	NaN	1132.5	30	0	201.26	0.035	+			16056	HAYEHSLGK	9	46	521.2587883446218	1040.5030237560436	2	521.2597045898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HAYEHSLGK_	ENSG00000105355|ENST00000221957|PLIN3;nc|ENSG00000105355|O60664-2|PLIN3;nc|ENSG00000105355|O60664-3|PLIN3;nc|ENSG00000105355|O60664-4|PLIN3	62.107414245175825	0.1960472003779324	1				NaN	NaN	0	NaN	709	2792	3500
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3512	15.828	NaN	2682.9	30	0	444.88	0.145			+	29723	PHLYASKYL	9	44	364.5358667482205	NaN	0	364.20111083984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PHLYASKYL_	REV__ENSG00000234127|ENST00000454678|TRIM26;REV__TRIM26|p.Q349Sfs*10|1|0.39|ENSG00000234127|chr6:30186451-30186451|G/-|frameshift_variant	34.172542307311794	0.30503706118289736	1				NaN	NaN	0	NaN	715	2795	3511
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3518	15.848	NaN	3728.3	30	0	529.55	0.213	+			38528	SSDERYRPGGK	11	80	626.3072313695475	1250.5999098058949	2	626.3082885742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSDERYRPGGK_	ENST00000505443.1_1_5:3422621-3535901:-|nuORF	76.16968421966216	0.18430501143391895	1				NaN	NaN	0	NaN	718	2798	3517
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3519	15.851	NaN	4355.5	30	0	878.71	0.106	+			42541	TARREDESY	9	64	563.7609538529127	NaN	0	563.7603759765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TARREDESY_	ENSG00000171824|ENST00000376936|EXOSC10;ENST00000485606.1_1_1:11140819-11141291:-|nuORF;nc|ENSG00000171824|Q01780-2|EXOSC10	39.252832667884924	0.27938773122138094	1				NaN	NaN	0	NaN	719	2798	3517
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3520	15.853	NaN	2773.7	30	0	855.25	0.036	+			48442	VTKRKTKCV	9	35	354.8853438112795	1061.6342020340385	3	354.8857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTKRKTKCV_	ENSG00000104687|ENST00000221130|GSR;nc|ENSG00000104687|P00390-2|GSR;nc|ENSG00000104687|P00390-3|GSR;nc|ENSG00000104687|P00390-4|GSR;nc|ENSG00000104687|P00390-5|GSR	29.170058357718403	0.5306379469863586	1				NaN	NaN	0	NaN	720	2798	3517
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3526	15.871	NaN	14366	30	0	3705.9	0.214	+			22927	KVQDVKKTIQK	11	62	438.941663192303	1313.803160177109	3	438.94189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVQDVKKTIQK_	ENSG00000133706|ENST00000394434|LARS1;ENST00000508667.5_1_5:145522961-145531505:-|nuORF;nc|ENSG00000133706|Q9P2J5-2|LARS1	58.2462437865262	0.33910980880557884	1				NaN	NaN	0	NaN	723	2801	3525
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3527	15.874	NaN	1553.3	30	0	363.39	0.032			+	3697	ATAAAVAAVG	10	42	401.22692878564175	800.4393046380835	2	401.227294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATAAAVAAVG_	REV__ENST00000491165.5_2_3:113396224-113415451:-|nuORF	55.50420428727701	0.4067289358710215	1				NaN	NaN	0	NaN	724	2801	3525
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3533	15.89	NaN	9028.1	30	0	1343.1	0.214	+			34180	RTCWETTKK	9	79	403.87279271421977	1208.5965487428593	3	403.8729553222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_RTC(Carbamidomethyl (C))WETTKK_	ENST00000504956.5_1_4:87869676-87967907:+|nuORF;ENST00000511442.1_2_4:87869713-87967910:+|nuORF	77.28774426308219	0.10927638851652666	1				NaN	NaN	0	NaN	727	2804	3532
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3534	15.893	NaN	1350.9	30	0	151.72	0.038	+			34181	RTCWETTKK	9	47	605.3055286073479	1208.5965042814958	2	605.3068237304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_RTC(Carbamidomethyl (C))WETTKK_	ENST00000504956.5_1_4:87869676-87967907:+|nuORF;ENST00000511442.1_2_4:87869713-87967910:+|nuORF	75.04331003522576	0.118981335847003	1				NaN	NaN	0	NaN	728	2804	3532
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3540	15.911	NaN	1458.9	30	0	895.8	0.144	+			32036	QRRAAPLPPP	10	31	551.8295013028915	1101.6444496725828	2	551.830322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QRRAAPLPPP_	ENST00000374810.7_1_20:33292105-33293196:+|nuORF	23.04248740728303	0.69165701907106	1				NaN	NaN	0	NaN	731	2807	3539
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3550	15.947	NaN	2348.6	30	0	543.73	0.215	+			22398	KTISQAVNK	9	59	494.79308986884206	987.5716268044841	2	494.7933044433594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTISQAVNK_	ENSG00000061676|ENST00000361354|NCKAP1;ENST00000495619.1_1_2:183822183-183829436:-|nuORF;nc|ENSG00000061676|Q9Y2A7-2|NCKAP1;NCKAP1|p.M725Kfs*19|1|0.04|ENSG00000061676|chr2:182953311-182953312|-/AGAGTATT|frameshift_variant	96.66504779109242	0.04607440320619715	1				NaN	NaN	0	NaN	735	2813	3549
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3551	15.95	NaN	1040.9	30	0	301.16	0.034	+			34244	RTGPPMGSR	9	47	479.74800790553655	957.4814628778731	2	479.7481384277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RTGPPMGSR_	ENSG00000106682|ENST00000265753|EIF4H;nc|ENSG00000106682|Q15056-2|EIF4H	53.08895987439943	0.27122541748218487	1				NaN	NaN	0	NaN	736	2813	3549
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3557	15.967	NaN	5743.7	30	0	1919.3	0.214				-1	 	0	44	418.229243894391	834.443934855582	2	418.2298583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	739	2816	3556
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3558	15.971	NaN	1606.1	30	0	370.59	0.106	+			29198	NVNEPATTK	9	46	487.2511093708639	972.4876658085278	2	487.25152587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NVNEPATTK_	ENSG00000116906|ENST00000366647|GNPAT;nc|ENSG00000116906|O15228-2|GNPAT	72.87924865735499	0.12833875048249987	1				NaN	NaN	0	NaN	740	2816	3556
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3559	15.973	NaN	1811.2	30	0	461.22	0.106			+	21173	KKWGDRVR	8	43	522.8058551258523	1043.5971573185045	2	522.8067016601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KKWGDRVR_	REV__COL15A1|p.L1176Ifs*39|1|0.32|ENSG00000204291|chr9:99062087-99062088|-/A|frameshift_variant;REV__ENSG00000204291|ENST00000375001|COL15A1	54.776311868738084	0.5534952410049249	1				NaN	NaN	0	NaN	741	2816	3556
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3560	15.974	NaN	1676.2	30	0	172.49	0.041			+	-1	CICDVASDYRL	11	43	457.87066650390625	NaN	0	457.87066650390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))IC(Carbamidomethyl (C))DVASDYRL_	REV__ENSG00000178685|ENST00000313028|PARP10;REV__ENST00000526007.5_1_8:145051654-145057989:-|nuORF	24.231819034082204	0.456735970842152	1				NaN	NaN	0	NaN	742	2816	3556
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3567	15.993	NaN	11367	30	0	3853.4	0.214			+	36924	SIKISKVVQ	9	51	334.549799647747	1000.627569543441	3	334.5499572753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIKISKVVQ_	REV__ENST00000531771.5_1_11:85718509-85733504:-|nuORF	52.936696900407355	0.27249468807391813	1				NaN	NaN	0	NaN	746	2819	3566
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3568	15.997	NaN	3539.2	30	0	728.45	0.106	+			22806	KVFGVSTPLP	10	64	522.8058551258523	1043.5971573185045	2	522.8060302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVFGVSTPLP_	ENST00000543701.5_1_12:3600779-3659332:+|nuORF	76.7741389293348	0.22197596950688292	1				NaN	NaN	0	NaN	747	2819	3566
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3569	15.999	NaN	585.98	30	0	65.752	0.034			+	-1	CWTAAIVK	8	36	474.75311279296875	NaN	0	474.75311279296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_C(Carbamidomethyl (C))WTAAIVK_	REV__ENSG00000163394|ENST00000295589|CCKAR	33.51558372728122	1.7418937515398478	1				NaN	NaN	0	NaN	748	2819	3566
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3581	16.024	NaN	893.55	30	0	189.75	0.214	+			41706	SVSDPGQAR	9	36	458.7276611328125	NaN	0	458.7276611328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSDPGQAR_	nc|ENSG00000157800|Q8NCC5-3|SLC37A3	42.396135135203025	0.2590952873412954	1				NaN	NaN	0	NaN	757	2822	3580
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3582	16.028	NaN	2153.2	30	0	383.98	0.106	+			38604	SSGPASPPR	9	40	428.21925138507385	NaN	0	428.21923828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSGPASPPR_	ENSG00000272333|ENST00000420124|KMT2B;ENST00000592092.1_1_19:36224173-36224410:+|nuORF;KMT2B|p.A2538Pfs*76|1|0.42|ENSG00000272333|chr19:35737693-35737693|G/-|frameshift_variant	58.22992032128504	0.15686832049467786	1				NaN	NaN	0	NaN	758	2822	3580
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3583	16.03	NaN	706.83	30	0	88.683	0.106			+	41320	SVLQGDAK	8	36	409.22441684031054	NaN	0	409.2244567871094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVLQGDAK_	REV__ENSG00000185404|ENST00000415673|SP140L;REV__nc|ENSG00000185404|Q9H930-1|SP140L;REV__nc|ENSG00000185404|Q9H930-2|SP140L;REV__SP140L|p.F492Lfs*17|1|0.46|ENSG00000185404|chr2:230401414-230401414|T/-|frameshift_variant	29.14955571784316	1.7418937515398478	1				NaN	NaN	0	NaN	759	2822	3580
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3584	16.032	NaN	633.44	30	0	87.919	0.106			+	31909	QQKQLTKQ	8	45	501.2908020019531	NaN	0	501.2908020019531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QQKQLTKQ_	REV__ENST00000476350.1_1_1:39768622-39838291:+|nuORF;REV__nc|ENSG00000127603|Q9UPN3-2|MACF1;REV__nc|ENSG00000127603|Q9UPN3-3|MACF1;REV__nc|ENSG00000127603|Q9UPN3-4|MACF1	23.52269567125451	1.7418937515398478	1				NaN	NaN	0	NaN	760	2822	3580
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3585	16.033	NaN	1212.6	30	0	266.78	0.106			+	10150	ESSNIALA	8	39	402.70908699485113	NaN	0	402.2530517578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ESSNIALA_	REV__ENSG00000052841|ENST00000039989|TTC17;REV__nc|ENSG00000052841|Q96AE7-2|TTC17	44.116797842482775	1.7418937515398478	1				NaN	NaN	0	NaN	761	2822	3580
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3586	16.035	NaN	461.19	30	0	93.651	0.035	+			9100	EGKKYIQTA	9	30	519.285888671875	NaN	0	519.285888671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EGKKYIQTA_	tr|U7SS07|U7SS07_FUSNUPeptide/nickeltransportsystempermeaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01498PE=3SV=1	33.921630207806714	0.3063038642147651	1				NaN	NaN	0	NaN	762	2822	3580
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3592	16.05	NaN	3801.3	30	0	563.59	0.143			+	30156	PSDRSGQLR	9	54	508.2671062513148	1014.5196595694296	2	508.26763916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PSDRSGQLR_	REV__ENST00000419984.6_1_7:56101084-56118851:-|nuORF	39.252832667884924	0.4290233611298554	1				NaN	NaN	0	NaN	765	2825	3591
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3599	16.071	NaN	1420.3	30	0	157.72	0.214	+			34480	RVDDAVAAK	9	50	472.7614777475054	943.5084025618108	2	472.76171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVDDAVAAK_	ENSG00000244187|ENST00000290079|TMEM141;ENST00000465017.5_1_9:139685822-139687379:+|nuORF	74.1650062923329	0.12277912660386392	1				NaN	NaN	0	NaN	769	2828	3598
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3600	16.074	NaN	5006.1	30	0	1035.2	0.036				-1	 	0	64	549.2767975685522	1096.5390422039043	2	549.2777099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	770	2828	3598
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3606	16.091	NaN	7177.6	30	0	2615.3	0.214				-1	STMVAIAVCYV	11	47	391.52788139254676	NaN	0	391.5278015136719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_STM(Oxidation (M))VAIAVCYV_	ANKH|p.A448V|1|0.24|ENSG00000154122|chr5:14712896-14712896|G/A|missense_variant	31.634271133179894	0.4244354679066847	1				NaN	NaN	0	NaN	773	2831	3605
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3607	16.094	NaN	5631.2	30	0	2014.5	0.106	+			6452	AVYGQKEIHRK	11	56	443.58563573482144	1327.7350778046643	3	443.9202880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVYGQKEIHRK_	ENSG00000145907|ENST00000356245|G3BP1;ENST00000413279.1_1_2:136269117-136269381:-|nuORF;ENST00000519832.1_1_5:151166169-151170647:+|nuORF;nc|ENSG00000145907|Q13283-2|G3BP1	25.57405402267927	0.7215402271931856	1				NaN	NaN	0	NaN	774	2831	3605
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3608	16.096	NaN	1847.7	30	0	156.81	0.106			+	19715	KDTARVQGV	9	55	487.2747455319074	NaN	0	487.275146484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KDTARVQGV_	REV__CDHR3|p.T478I|1|0.3|ENSG00000128536|chr7:106017852-106017852|C/T|missense_variant;REV__ENSG00000128536|ENST00000317716|CDHR3	60.97194046774394	0.14517358171632622	1				NaN	NaN	0	NaN	775	2831	3605
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3609	16.098	NaN	1524.2	30	0	236.68	0.034	+			3423	ASQKVTISK	9	48	481.2875022353834	960.5604515375668	2	481.2872009277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASQKVTISK_	CACUL1|p.Y368Tfs*100|1|0.52|ENSG00000151893|chr10:118686137-118686137|C/-|frameshift_variant;ENST00000369151.7_1_10:120445350-120445566:-|nuORF	58.2462437865262	0.22823408064396822	1				NaN	NaN	0	NaN	776	2831	3605
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3616	16.116	NaN	4590	30	0	472.1	0.214	+			352	AAQKNMALK	9	69	487.77577600117144	973.5369990691429	2	487.775634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAQKNMALK_	ENSG00000100345|ENST00000216181|MYH9;SYNDIG1-MYH9|1|fusion	93.19546047674547	0.05585629608842056	1				NaN	NaN	0	NaN	780	2834	3615
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3617	16.12	NaN	2005.8	30	0	151.66	0.106			+	21131	KKSLQHNEK	9	59	556.3139947371602	1110.6134365411203	2	556.315185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KKSLQHNEK_	REV__CCDC88C|p.K1383Sfs*29|1|0.08|ENSG00000015133|chr14:91291049-91291049|T/-|frameshift_variant;REV__ENSG00000015133|ENST00000389857|CCDC88C	58.22992032128504	0.22837015374068087	1				NaN	NaN	0	NaN	781	2834	3615
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3618	16.121	NaN	11500	30	0	8166.9	0.106			+	-1	IGVIHPFHC	9	39	360.520479771428	1078.539609914484	3	360.8550109863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_IGVIHPFHC(Carbamidomethyl (C))_	REV__ENST00000507080.5_1_4:176556058-176562011:-|nuORF	21.9598887501803	0.5980208138527809	1				NaN	NaN	0	NaN	782	2834	3615
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3619	16.123	NaN	1154.1	30	0	171.57	0.049	+			33502	RKLLKLLKYLL	11	47	700.9919003896197	NaN	0	700.6563720703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RKLLKLLKYLL_	ENST00000509297.5_1_5:135469533-135483594:+|nuORF;ENST00000545279.5_1_5:135468581-135489282:+|nuORF	0	0.456735970842152	1				NaN	NaN	0	NaN	783	2834	3615
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3628	16.144	NaN	4374.1	30	0	716.73	0.214	+			23121	KVVVSPTK	8	50	429.27600360718026	856.5374542811605	2	429.2760314941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVVVSPTK_	ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232323706-232327997:-|nuORF	69.6276240434122	0.4100012001731381	1				NaN	NaN	0	NaN	789	2837	3627
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3629	16.147	NaN	696.34	30	0	126.48	0.106	+			50797	YEPCIVVS	8	37	455.2247480414888	908.4349431497776	2	455.224853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YEPCIVVS_	ENSG00000185306|ENST00000543942|C12orf56;nc|nan|Q8IXR9-2|C12orf56	42.47446043378293	0.6409579893742323	1				NaN	NaN	0	NaN	790	2837	3627
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3630	16.149	NaN	1594.6	30	0	329.91	0.106	+			12061	GAAGPVCSK	9	37	395.1995594130518	788.3845658929037	2	395.1994934082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GAAGPVCSK_	ENST00000395863.7_1_20:55841273-55841597:-|nuORF	54.776311868738084	0.25715957988447635	1				NaN	NaN	0	NaN	791	2837	3627
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3631	16.151	NaN	1164.1	30	0	319.54	0.106	+			13521	GLQHVQPAGQ	10	45	517.7723164326435	NaN	0	517.7725219726562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GLQHVQPAGQ_	ENSG00000147443|ENST00000276420|DOK2	42.396135135203025	0.3536752194735987	1				NaN	NaN	0	NaN	792	2837	3627
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3632	16.153	NaN	1142.5	30	0	220.92	0.038			+	-1	LPPRHPMGVAL	11	35	401.8951721191406	NaN	0	401.8951721191406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_LPPRHPM(Oxidation (M))GVAL_	REV__ENST00000310677.8_1_14:24791428-24793534:-|nuORF;REV__ENST00000554577.5_1_14:24791773-24793534:-|nuORF;REV__ENST00000554936.1_1_14:24791773-24792709:-|nuORF	20.83715455343099	0.456735970842152	1				NaN	NaN	0	NaN	793	2837	3627
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3640	16.171	NaN	15477	30	0	4152.2	0.214	+			5252	ATVDKTVCK	9	74	482.7597759634821	963.5049989937643	2	482.759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATVDKTVCK_	ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1670Tfs*23|1|0.29|ENSG00000174231|chr17:1659487-1659487|C/-|frameshift_variant	159.27591364854348	0.004707062175358555	1				NaN	NaN	0	NaN	798	2840	3639
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3641	16.175	NaN	1165.7	30	0	121.95	0.035	+			36129	SEKRENVM	8	43	496.745008992783	NaN	0	496.7445068359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEKRENVM_	ENSG00000140526|ENST00000352732|ABHD2	30.503639358989545	1.7418937515398478	1				NaN	NaN	0	NaN	799	2840	3639
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3647	16.19	NaN	2574.9	30	0	346.26	0.145			+	-1	TTILVMYLK	9	40	366.5483440052554	1096.6232026159662	3	366.5484619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_TTILVM(Oxidation (M))YLK_	REV__ENSG00000095139|ENST00000264028|ARCN1	47.657333605630114	0.33044192980041115	1				NaN	NaN	0	NaN	802	2843	3646
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3653	16.208	NaN	3747	30	0	483.61	0.214			+	31793	QPLNSVQKAL	10	66	549.3188234270375	1096.623093920875	2	549.3196411132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QPLNSVQKAL_	REV__ARHGAP22|p.F312Lfs*10|1|0.3|ENSG00000128805|chr10:48453356-48453356|A/-|frameshift_variant;REV__ARHGAP22|p.S682Rfs*3|4|0.4|ENSG00000128805|chr10:48446444-48446444|A/-|frameshift_variant;REV__ENSG00000128805|ENST00000249601|ARHGAP22;REV__nc|ENSG00000128805|Q7Z5H3-2|ARHGAP22;REV__nc|ENSG00000128805|Q7Z5H3-3|ARHGAP22;REV__nc|ENSG00000128805|Q7Z5H3-5|ARHGAP22	69.6276240434122	0.2803623802747859	1				NaN	NaN	0	NaN	805	2846	3652
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3654	16.211	NaN	1546.6	30	0	262.54	0.036			+	48436	VTKKRSASTP	10	42	537.8175972026463	NaN	0	537.8171997070312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTKKRSASTP_	REV__CDCA7L|p.C406Vfs*46|1|0.5|ENSG00000164649|chr7:21903097-21903097|G/-|frameshift_variant;REV__ENSG00000164649|ENST00000406877|CDCA7L;REV__nc|ENSG00000164649|Q96GN5-2|CDCA7L;REV__nc|ENSG00000164649|Q96GN5-4|CDCA7L;REV__nc|ENSG00000164649|Q96GN5-5|CDCA7L	27.047317107675042	0.41136583337917604	1				NaN	NaN	0	NaN	806	2846	3652
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3660	16.228	NaN	2577.5	30	0	205.59	0.144	+			39269	STAQRVTYK	9	58	527.2879059780075	1052.561259022815	2	527.2877807617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STAQRVTYK_	ENSG00000126226|ENST00000337344|PCID2;nc|ENSG00000126226|Q5JVF3-2|PCID2;nc|ENSG00000126226|Q5JVF3-3|PCID2;nc|ENSG00000126226|Q5JVF3-4|PCID2	114.8945686534367	0.024290463251177924	1				NaN	NaN	0	NaN	809	2849	3659
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3678	16.284	NaN	2758.8	30	0	1400.5	0.214				-1	VSYEIKDMCIK	11	47	467.8968836933377	1400.6688216802131	3	467.8970642089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_VSYEIKDM(Oxidation (M))C(Carbamidomethyl (C))IK_	ENSG00000206530|ENST00000393845|CFAP44;nc|ENSG00000206530|Q96MT7-1|CFAP44	28.5767321226876	0.690044582712672	1				NaN	NaN	0	NaN	818	2858	3677
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3679	16.288	NaN	1437.4	30	0	303.26	0.039	+			8350	EALEHLRHRV	10	32	420.56998847587033	1258.688136027811	3	420.5702209472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EALEHLRHRV_	ENSG00000158246|ENST00000289166|TENT5B	21.9598887501803	0.7004979571547932	1				NaN	NaN	0	NaN	819	2858	3677
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3687	16.306	NaN	2753.5	30	0	1676.5	0.214	+			29552	PEQKNKGK	8	35	464.7641918707901	927.5138308083802	2	464.76458740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PEQKNKGK_	ENSG00000170091|ENST00000303177|NSG2	26.79610172149135	0.7524337208463756	1				NaN	NaN	0	NaN	824	2861	3686
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3688	16.31	NaN	1955.3	30	0	308.41	0.106	+			35857	SEDKKRPSL	9	50	530.2942993156391	1058.5740456980782	2	530.2943115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEDKKRPSL_	ENSG00000140682|ENST00000394863|TGFB1I1;ENST00000564176.5_1_16:31485144-31486093:+|nuORF;ENST00000567066.6_1_16:31483405-31488894:+|nuORF;ENST00000568142.2_1_16:31484766-31486093:+|nuORF;nc|ENSG00000140682|O43294-2|TGFB1I1	58.22992032128504	0.22837015374068087	1				NaN	NaN	0	NaN	825	2861	3686
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3689	16.312	NaN	1210	30	0	212.91	0.106	+			37061	SISAYTMPL	9	38	491.74801815293387	NaN	0	491.7477722167969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SISAYTMPL_	ENSG00000188869|ENST00000359440|TMC3;ENST00000559982.1_1_15:81630174-81666445:-|nuORF;nc|ENSG00000188869|Q7Z5M5-2|TMC3;TMC3|p.H607Tfs*40|1|0.34|ENSG00000188869|chr15:81341415-81341415|G/-|frameshift_variant	47.91560031466742	0.22105767942158736	1				NaN	NaN	0	NaN	826	2861	3686
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3690	16.313	NaN	1651.9	30	0	393.43	0.106	+			32157	QSPRNSWD	8	39	495.2273148010626	988.4400766689253	2	495.22735595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QSPRNSWD_	ENSG00000167528|ENST00000547026|ZNF641;nc|ENSG00000167528|Q96N77-3|ZNF641;nc|ENSG00000167528|Q96N77|ZNF641	35.61828744233558	0.6843154725607303	1				NaN	NaN	0	NaN	827	2861	3686
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3691	16.315	NaN	885.86	30	0	224.63	0.036			+	21481	KNIYRLMGS	9	51	541.2955217156323	1080.5764904980645	2	541.7977905273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KNIYRLMGS_	REV__ENSG00000122483|ENST00000690025|CCDC18;REV__nc|ENSG00000122483|Q5T9S5|CCDC18	23.04248740728303	0.5879033540491928	1				NaN	NaN	0	NaN	828	2861	3686
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3701	16.337	NaN	1116.3	30	0	313.58	0.214			+	50373	WWLWEPVA	8	32	543.7749132493974	1085.5352735655947	2	543.7760620117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WWLWEPVA_	REV__ENST00000278426.7_2_11:57263521-57268513:-|nuORF	30.503639358989545	0.7238069182250283	1				NaN	NaN	0	NaN	835	2864	3700
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3702	16.341	NaN	3872.9	30	0	1999.4	0.036	+			40718	SVCGKSFHR	9	36	359.8468418877229	NaN	0	359.8470153808594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SVC(Carbamidomethyl (C))GKSFHR_	ENSG00000066422|ENST00000312938|ZBTB11;ZBTB11|p.E974Nfs*14|1|0.1|ENSG00000066422|chr3:101651408-101651408|C/-|frameshift_variant	42.86426827375447	0.2558691296974908	1				NaN	NaN	0	NaN	836	2864	3700
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3708	16.357	NaN	1276.9	30	0	204.88	0.142			+	30223	PSSLTNVAK	9	46	458.75857902188784	915.5026051105757	2	458.7581787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PSSLTNVAK_	REV__ENST00000540458.5_1_12:6956031-6956169:+|nuORF	34.172542307311794	0.4838870758800184	1				NaN	NaN	0	NaN	839	2867	3707
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3714	16.375	NaN	2423.5	30	0	462.63	0.141			+	36608	SGEMGKTK	8	51	427.2077062422892	852.4008595513784	2	427.2080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_SGEM(Oxidation (M))GKTK_	REV__ENSG00000103351|ENST00000576634|CLUAP1	76.7741389293348	0.3504530765139327	1				NaN	NaN	0	NaN	842	2870	3713
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3723	16.399	NaN	30725	30	0	9988.4	0.214				-1	 	0	70	333.18173349215164	996.5233710766549	3	333.1820068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	848	2873	3722
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3724	16.403	NaN	1999.8	30	0	559	0.106	+			14505	GTDEHVVCK	9	55	494.231940347061	NaN	0	494.2323913574219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTDEHVVCK_	nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM	101.60071028292904	0.0182107634719595	1				NaN	NaN	0	NaN	849	2873	3722
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3725	16.405	NaN	1366.4	30	0	621.77	0.106			+	20981	KKFGRQAPK	9	34	353.8849912934735	1058.6331444806206	3	353.88525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KKFGRQAPK_	REV__ENST00000265087.8_1_5:172743950-172744151:-|nuORF	30.503639358989545	0.5181749237905803	1				NaN	NaN	0	NaN	850	2873	3722
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3726	16.406	NaN	1688.3	30	0	252.78	0.033	+			5687	AVEGPSEAK	9	48	444.2270746003083	NaN	0	444.22735595703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVEGPSEAK_	ENSG00000196924|ENST00000369850|FLNA;ENST00000490936.5_1_X:153579531-153588003:-|nuORF;FLNA|p.G2237Efs*109|1|0.28|ENSG00000196924|chrX:154352240-154352240|C/-|frameshift_variant;FLNA|p.Q1716Sfs*23|2|0.38|ENSG00000196924|chrX:154354896-154354896|G/-|frameshift_variant;FLNA|p.R2520Vfs*16|1|0.7|ENSG00000196924|chrX:154349560-154349560|G/-|frameshift_variant;nc|ENSG00000196924|P21333-2|FLNA	56.72105179125745	0.16330365735109603	1				NaN	NaN	0	NaN	851	2873	3722
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3737	16.432	NaN	10039	30	0	1661.2	0.214				-1	 	0	57	504.2533994924766	1006.4922460517532	2	504.2532958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	859	2876	3736
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3738	16.435	NaN	2748.3	30	0	336.66	0.106			+	12867	GEQTQERL	8	48	480.7400916973801	959.4656304615602	2	480.740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEQTQERL_	REV__ENSG00000203499|ENST00000527139|IQANK1	62.107414245175825	0.4809183816468817	1				NaN	NaN	0	NaN	860	2876	3736
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3739	16.437	NaN	1189.3	30	0	269.43	0.106	+			38863	SSNSYAIKK	9	49	499.2697736505201	NaN	0	499.2697448730469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSNSYAIKK_	ENSG00000083845|ENST00000196551|RPS5;ENST00000599232.1_1_19:58906030-58906114:+|nuORF	55.08391021199286	0.17165699430885212	1				NaN	NaN	0	NaN	861	2876	3736
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3740	16.439	NaN	1697.1	30	0	308.76	0.106	+			37871	SNSYAIKK	8	55	455.75279190993274	NaN	0	455.7528076171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SNSYAIKK_	ENSG00000083845|ENST00000196551|RPS5;ENST00000599232.1_1_19:58906030-58906114:+|nuORF	79.71258880314673	1.7418937515398478	1				NaN	NaN	0	NaN	862	2876	3736
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3741	16.441	NaN	1576.4	30	0	362.88	0.106			+	844	AEGPPPKK	8	45	412.237261127297	822.459969321394	2	412.2375793457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEGPPPKK_	REV__ENSG00000180720|ENST00000682254|CHRM4	47.91560031466742	0.6071945918984287	1				NaN	NaN	0	NaN	863	2876	3736
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3742	16.443	NaN	1683.6	30	0	184.69	0.033			+	51293	YSAQNNLG	8	45	433.7051612624929	NaN	0	433.7052917480469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YSAQNNLG_	REV__CECR2|p.N841Tfs*59|2|0.35|ENSG00000099954|chr22:17542597-17542597|C/-|frameshift_variant	25.450171626174864	1.7418937515398478	1				NaN	NaN	0	NaN	864	2876	3736
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3753	16.468	NaN	7506.1	30	0	1096	0.214	+			51285	YSAARSAAA	9	57	434.21935334637834	866.4241537595567	2	434.2196044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YSAARSAAA_	ENSG00000189143|ENST00000340958|CLDN4	96.0336014099291	0.047854655524928534	1				NaN	NaN	0	NaN	872	2879	3752
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3754	16.471	NaN	273.65	30	0	54.975	0.035	+			37949	SPEPSPLPR	9	13	327.17828369140625	NaN	0	327.17828369140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SPEPSPLPR_	ENST00000322315.5_1_19:3590178-3593283:+|nuORF	14.864876125193954	0.3866709117995958	1				NaN	NaN	0	NaN	873	2879	3752
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3765	16.497	NaN	1930.2	30	0	901.43	0.143	+			31894	QQESLEQK	8	48	495.24825901036314	988.4819650875263	2	495.24786376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QQESLEQK_	ENSG00000180777|ENST00000690538|ANKRD30B;nc|ENSG00000180777|Q9BXX2|ANKRD30B	46.45678178249821	0.6162468623830999	1				NaN	NaN	0	NaN	881	2882	3764
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3777	16.524	NaN	3134.5	30	0	339.04	0.214	+			14808	GTLGAVHK	8	49	391.72928422336037	781.4440155135208	2	391.7294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTLGAVHK_	ENSG00000099785|ENST00000215555|MARCHF2;nc|ENSG00000099785|Q9P0N8-2|MARCHF2	82.30502934623384	0.30436709589983096	1				NaN	NaN	0	NaN	890	2885	3776
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3778	16.528	NaN	1797.8	30	0	196.47	0.106	+			38423	SSAINHLK	8	59	435.2453159317506	868.4760789303012	2	435.2454833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSAINHLK_	ENST00000431308.5_1_17:28935531-28937913:+|nuORF	68.78682469695295	0.41700713582915416	1				NaN	NaN	0	NaN	891	2885	3776
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3779	16.53	NaN	18913	30	0	5041.3	0.106				-1	 	0	67	565.8238618899561	1129.6331708467121	2	565.8248291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	892	2885	3776
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3780	16.532	NaN	10462	30	0	3982.5	0.106	+			14058	GSIKGELRK	9	50	329.8693744868432	986.5862940607296	3	329.86956787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GSIKGELRK_	CHD1|p.E1321Kfs*22|3|0.3|ENSG00000153922|chr5:98870705-98870705|T/-|frameshift_variant;CHD1|p.E1321Rfs*17|1|0.48|ENSG00000153922|chr5:98870704-98870705|-/T|frameshift_variant;CHD1|p.V947Tfs*15|1|0.21|ENSG00000153922|chr5:98882003-98882004|CT/-|frameshift_variant;ENSG00000153922|ENST00000614616|CHD1;nc|ENSG00000153922|O14646-2|CHD1	45.9519527083369	0.35044536499095585	1				NaN	NaN	0	NaN	893	2885	3776
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3781	16.533	NaN	867.78	30	0	123.65	0.038				-1	 	0	39	389.2235680492531	1164.6488747479593	3	389.2237548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	894	2885	3776
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3792	16.559	NaN	14872	30	0	1785.7	0.214	+			30421	PWVKSPPLLM	10	79	395.22252693576735	1182.645751407502	3	395.2228698730469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_PWVKSPPLLM(Oxidation (M))_	ANKRD34B|p.P416Qfs*4|1|0.28|ENSG00000189127|chr5:80558773-80558773|G/-|frameshift_variant;ANKRD34B|p.V479Sfs*11|1|0.27|ENSG00000189127|chr5:80558585-80558586|-/T|frameshift_variant;ENSG00000189127|ENST00000338682|ANKRD34B	59.93077597824379	0.36646980200755325	1				NaN	NaN	0	NaN	902	2888	3791
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3793	16.562	NaN	1431.1	30	0	673.14	0.106	+			25418	LPLPGLCS	8	32	400.2226867675781	NaN	0	400.2226867675781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LPLPGLCS_	ENST00000229812.7_1_6:36507941-36515235:-|nuORF	24.504012794735996	1.7418937515398478	1				NaN	NaN	0	NaN	903	2888	3791
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3794	16.564	NaN	1401	30	0	514.85	0.106				-1	AVCEKTFKH	9	34	373.8585510253906	NaN	0	373.8585510253906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_AVC(Carbamidomethyl (C))EKTFKH_	ENSG00000166188|ENST00000299237|ZNF319	29.14955571784316	0.3303970763161698	1				NaN	NaN	0	NaN	904	2888	3791
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3795	16.566	NaN	3818.7	30	0	1371	0.106	+			21148	KKTISYQG	8	57	462.760607928728	923.506662924256	2	462.7608642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KKTISYQG_	ENSG00000255713|ENST00000545221|OR4D2	47.91560031466742	0.6071945918984287	1				NaN	NaN	0	NaN	905	2888	3791
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3796	16.568	NaN	8536.3	30	0	3901.8	0.106				-1	MKCPQIKLL	9	36	377.55170543743407	1129.6332869125022	3	377.5519714355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_MKC(Carbamidomethyl (C))PQIKLL_	DHX57|p.N296Mfs*39|1|0.37|ENSG00000163214|chr2:38861523-38861523|T/-|frameshift_variant	26.69291269510374	0.5537881896960711	1				NaN	NaN	0	NaN	906	2888	3791
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3797	16.57	NaN	1152.2	30	0	228.13	0.106	+			15753	GVSPTSLGPS	10	41	451.23484737516475	900.4551418171295	2	451.23529052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GVSPTSLGPS_	ENST00000468969.6_1_9:130536689-130540970:-|nuORF	34.172542307311794	0.6007644933930345	1				NaN	NaN	0	NaN	907	2888	3791
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3798	16.572	NaN	2849.3	30	0	484.49	0.035	+			6380	AVVEKIHAK	9	54	497.8056121331645	993.596671333129	2	497.80609130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AVVEKIHAK_	ENSG00000172432|ENST00000307126|GTPBP2;nc|ENSG00000172432|Q9BX10-2|GTPBP2;nc|ENSG00000172432|Q9BX10-3|GTPBP2;nc|ENSG00000172432|Q9BX10-4|GTPBP2	114.85826248499774	0.024312442104607014	1				NaN	NaN	0	NaN	908	2888	3791
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3809	16.597	NaN	20593	30	0	10594	0.214	+			14598	GTGASGSFK	9	57	406.2005424759379	810.3865320186758	2	406.2008361816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTGASGSFK_	ENSG00000124575|ENST00000244534|H1-3;ENSG00000124610|ENST00000244573|H1-1;ENSG00000168298|ENST00000304218|H1-4;ENSG00000184357|ENST00000331442|H1-5;ENSG00000187475|ENST00000338379|H1-6;ENSG00000187837|ENST00000343677|H1-2	104.0567914643314	0.03506238181059741	1				NaN	NaN	0	NaN	916	2891	3808
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3810	16.6	NaN	1360.6	30	0	550.12	0.037				-1	MVLFAMVIR	9	30	365.87188720703125	NaN	0	365.87188720703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_MVLFAM(Oxidation (M))VIR_	CCNE1|p.P333L|1|0.25|ENSG00000105173|chr19:29822491-29822491|C/T|missense_variant	20.94693142431847	0.3660861156085067	1				NaN	NaN	0	NaN	917	2891	3808
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3821	16.626	NaN	4656	30	0	902.61	0.144	+			28348	NEKERQAAL	9	59	529.7829778121993	1057.5514026911985	2	529.7831420898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NEKERQAAL_	CAPG|p.A301V|1|0.35|ENSG00000042493|chr2:85395617-85395617|G/A|missense_variant;ENSG00000042493|ENST00000263867|CAPG;nc|ENSG00000042493|P40121-2|CAPG	85.16082228582465	0.07850854922700509	1				NaN	NaN	0	NaN	925	2894	3820
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3831	16.651	NaN	7898.5	30	0	807.63	0.214	+			38154	SQAPKAFNK	9	74	495.7722313217693	989.5299097103386	2	495.77166748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SQAPKAFNK_	ENSG00000099812|ENST00000215582|MISP	62.107414245175825	0.1960472003779324	1				NaN	NaN	0	NaN	932	2897	3830
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3832	16.655	NaN	657.78	30	0	135.85	0.106			+	33500	RKLELSQQ	8	37	501.29051853059076	NaN	0	501.28985595703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RKLELSQQ_	REV__ENSG00000130640|ENST00000252936|TUBGCP2;REV__nc|ENSG00000130640|Q9BSJ2-3|TUBGCP2;REV__nc|ENSG00000130640|Q9BSJ2-4|TUBGCP2;REV__TUBGCP2|p.H261Qfs*13|1|0.5|ENSG00000130640|chr10:133293603-133293603|G/-|frameshift_variant	31.529811441608018	1.7418937515398478	1				NaN	NaN	0	NaN	933	2897	3830
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3833	16.657	NaN	2776	30	0	1064.1	0.106	+			47389	VPKILSGYL	9	28	330.5377197265625	NaN	0	330.5377197265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VPKILSGYL_	ENST00000372685.7_1_X:102509567-102510024:-|nuORF	26.69291269510374	0.34280015626154364	1				NaN	NaN	0	NaN	934	2897	3830
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3834	16.659	NaN	418.19	30	0	77.782	0.106	+			19368	KALEEEEME	9	28	554.2479783405769	NaN	0	554.2479858398438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KALEEEEME_	ENSG00000173905|ENST00000470487|GOLIM4	18.324413293986947	0.3749620627292244	1				NaN	NaN	0	NaN	935	2897	3830
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3835	16.661	NaN	870.7	30	0	128.69	0.034			+	50911	YGGYGAPAAP	10	46	462.2156677246094	NaN	0	462.2156677246094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YGGYGAPAAP_	REV__ENSG00000105278|ENST00000262961|ZFR2;REV__nc|ENSG00000105278|Q9UPR6-3|ZFR2;REV__ZFR2|p.G634Afs*20|1|0.07|ENSG00000105278|chr19:3819075-3819075|C/-|frameshift_variant;REV__ZFR2|p.K352Nfs*75|1|0.42|ENSG00000105278|chr19:3825387-3825387|T/-|frameshift_variant;REV__ZFR2|p.P188Rfs*239|1|0.22|ENSG00000105278|chr19:3831695-3831695|G/-|frameshift_variant	26.79610172149135	0.4121907004225123	1				NaN	NaN	0	NaN	936	2897	3830
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3843	16.68	NaN	4624.5	30	0	478.92	0.215			+	32065	QSAATLFRP	9	63	495.7722313217693	989.5299097103386	2	495.77252197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QSAATLFRP_	REV__ENST00000328928.11_1_1:28212433-28212505:+|nuORF	87.75429964447693	0.0711966946989736	1				NaN	NaN	0	NaN	941	2900	3842
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3844	16.684	NaN	1841.8	30	0	324.39	0.106	+			15026	GTNHQLTVK	9	47	499.2748578745188	996.5351628158376	2	499.27545166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTNHQLTVK_	ENSG00000142197|ENST00000691173|DOP1B;nc|ENSG00000142197|Q9Y3R5-2|DOP1B	79.48907831485694	0.09975780661107167	1				NaN	NaN	0	NaN	942	2900	3842
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3845	16.686	NaN	1545.5	30	0	281.95	0.035			+	10508	EVVDRRLSG	9	48	515.7875299891797	1029.5605070451593	2	515.7890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EVVDRRLSG_	REV__ENSG00000132635|ENST00000360652|PCED1A;REV__nc|ENSG00000132635|Q9H1Q7-2|PCED1A;REV__nc|ENSG00000132635|Q9H1Q7-3|PCED1A;REV__PCED1A|p.G270Afs*21|1|0.08|ENSG00000132635|chr20:2838264-2838264|C/-|frameshift_variant	45.02220120713402	0.3613509778819777	1				NaN	NaN	0	NaN	943	2900	3842
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3856	16.709	NaN	6625	30	0	1612.1	0.214	+			32959	REDNQTNRL	9	67	573.2870554527728	1144.5595579723456	2	573.2880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_REDNQTNRL_	ENSG00000087460|ENST00000371085|GNAS;ENST00000313949.11_1_20:57415898-57485881:+|nuORF;ENST00000371075.7_3_20:57415898-57485881:+|nuORF;ENST00000476196.5_1_20:57478538-57485881:+|nuORF;ENST00000477931.5_1_20:57464155-57485881:+|nuORF;ENST00000480975.5_1_20:57464272-57485881:+|nuORF;ENST00000496934.5_1_20:57473969-57485881:+|nuORF;nc|ENSG00000087460|P63092-2|GNAS;nc|ENSG00000087460|P63092-3|GNAS;nc|ENSG00000087460|P63092-4|GNAS;nc|ENSG00000087460|Q5JWF2-2|GNAS;nc|ENSG00000087460|Q5JWF2|GNAS	129.42129120953632	0.01549634589885217	1				NaN	NaN	0	NaN	951	2903	3855
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3857	16.713	NaN	2173	30	0	688.91	0.106			+	32452	QVKIRPMT	8	54	486.78527496548577	971.5559969977716	2	486.78564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QVKIRPMT_	REV__CON__P50448	55.50420428727701	0.5462892107279674	1				NaN	NaN	0	NaN	952	2903	3855
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3858	16.715	NaN	3563.7	30	0	495.95	0.032			+	43438	TGLGAGQLT	9	54	409.22443484432415	NaN	0	409.2247314453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TGLGAGQLT_	REV__ENSG00000204463|ENST00000676615|BAG6;REV__ENST00000465348.5_1_6:31610527-31611963:-|nuORF;REV__nc|ENSG00000204463|P46379-2|BAG6;REV__nc|ENSG00000204463|P46379-5|BAG6;REV__nc|ENSG00000204463|P46379|BAG6	71.87747018426188	0.0992163553043454	1				NaN	NaN	0	NaN	953	2903	3855
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3870	16.74	NaN	7592.6	30	0	1543.6	0.214	+			19425	KAPVTKVAA	9	54	442.78181963384776	883.5490863344955	2	442.7820739746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAPVTKVAA_	ENSG00000107438|ENST00000329399|PDLIM1;ENST00000604187.1_1_14:50517346-50518003:+|nuORF	56.43379154798735	0.2433427591689151	1				NaN	NaN	0	NaN	962	2906	3869
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3871	16.744	NaN	1585.3	30	0	290.11	0.106			+	23463	LAEGWLLQ	8	43	465.2564178907663	928.4982828483326	2	465.2571105957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LAEGWLLQ_	REV__ENSG00000171298|ENST00000302262|GAA	50.0245360154114	0.5941082100236891	1				NaN	NaN	0	NaN	963	2906	3869
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3872	16.746	NaN	2076.8	30	0	1124.9	0.035			+	-1	GTKVAAAAAAM	11	22	326.50790488873474	NaN	0	326.508056640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_GTKVAAAAAAM(Oxidation (M))_	REV__ENST00000597403.5_1_19:47249325-47251827:+|nuORF	20.030474535948922	0.456735970842152	1				NaN	NaN	0	NaN	964	2906	3869
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3881	16.766	NaN	5686.6	30	0	771.05	0.214			+	9542	ELDVTLGQK	9	60	501.77676444182623	1001.5389759504525	2	501.77703857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ELDVTLGQK_	REV__ENSG00000147485|ENST00000356297|PXDNL;REV__nc|ENSG00000147485|A1KZ92-2|PXDNL;REV__PXDNL|p.T1359Qfs*25|1|0.33|ENSG00000147485|chr8:51339695-51339695|T/-|frameshift_variant	49.44154591367651	0.3095138337212152	1				NaN	NaN	0	NaN	970	2909	3880
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3882	16.77	NaN	9432.9	30	0	3662.6	0.106	+			23074	KVVDLANKK	9	44	338.88170374133335	1013.6232818242001	3	338.8815612792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVVDLANKK_	ENSG00000104413|ENST00000433389|ESRP1;ESRP1|p.L333Sfs*55|1|0.35|ENSG00000104413|chr8:94668009-94668009|G/-|frameshift_variant;ESRP1|p.N512Hfs*7|2|0.33|ENSG00000104413|chr8:94674383-94674384|AA/-|frameshift_variant;ESRP1|p.N512Kfs*8|1|0.48|ENSG00000104413|chr8:94674382-94674383|-/A|frameshift_variant;ESRP1|p.N512Tfs*2|2|0.36|ENSG00000104413|chr8:94674383-94674383|A/-|frameshift_variant;nc|ENSG00000104413|Q6NXG1-2|ESRP1;nc|ENSG00000104413|Q6NXG1-3|ESRP1;nc|ENSG00000104413|Q6NXG1-4|ESRP1;nc|ENSG00000104413|Q6NXG1-5|ESRP1	68.84614121027924	0.14577793175421136	1				NaN	NaN	0	NaN	971	2909	3880
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3883	16.771	NaN	684.65	30	0	71.817	0.106	+			22710	KVAPAPAVVKK	11	41	554.3662386317465	1106.7179243302928	2	554.3668212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KVAPAPAVVKK_	ENSG00000148303|ENST00000323345|RPL7A;ENST00000424041.1_1_20:36073469-36073910:-|nuORF;ENST00000463740.5_1_9:136215098-136217195:+|nuORF	45.908116695636124	0.4771019740774998	1				NaN	NaN	0	NaN	972	2909	3880
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3884	16.773	NaN	513.38	30	0	158.01	0.035			+	20086	KEKHGFQR	8	35	515.2835083007812	NaN	0	515.2835083007812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEKHGFQR_	REV__ENST00000526682.5_1_11:36398008-36415533:+|nuORF	23.04248740728303	1.7418937515398478	1				NaN	NaN	0	NaN	973	2909	3880
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3893	16.793	NaN	14653	30	0	2928.6	0.214	+			38254	SQNPRFYHK	9	51	392.8683662895493	1175.583269468848	3	392.86846923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SQNPRFYHK_	ENSG00000132522|ENST00000380728|GPS2;ENST00000571697.5_1_17:7216077-7216449:-|nuORF;ENST00000573807.5_1_17:7216077-7216773:-|nuORF;ENST00000574458.1_1_17:7216077-7216212:-|nuORF	62.107414245175825	0.1960472003779324	1				NaN	NaN	0	NaN	979	2912	3892
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3894	16.797	NaN	1625.2	30	0	321.36	0.034	+			46396	VEMDTRSP	8	40	467.7185380084092	933.4225230836184	2	467.71868896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VEMDTRSP_	nc|ENSG00000104972|Q8NHL6-2|LILRB1;nc|ENSG00000104972|Q8NHL6|LILRB1;nc|ENSG00000186818|Q8NHJ6-2|LILRB4	31.954861631926434	0.7126016770032289	1				NaN	NaN	0	NaN	980	2912	3892
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3900	16.813	NaN	6551.2	30	0	2207.7	0.215	+			45016	TVFKNGKVTK	10	47	374.5606540281133	1120.6601326845398	3	374.5609436035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVFKNGKVTK_	ENSG00000105835|ENST00000222553|NAMPT;ENST00000440465.1_1_10:36811746-36813066:-|nuORF	35.15202426646627	0.5927656479315102	1				NaN	NaN	0	NaN	983	2915	3899
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3901	16.817	NaN	1894.6	30	0	587.29	0.034	+			38478	SSATETINK	9	51	475.74311663571393	949.4716803382279	2	475.7435607910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSATETINK_	ENSG00000096696|ENST00000379802|DSP	98.58198989935565	0.04066992115528678	1				NaN	NaN	0	NaN	984	2915	3899
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3908	16.833	NaN	1513.2	30	0	230.43	0.141	+			14002	GSEGPSYAK	9	41	448.2116834859862	894.4088140387724	2	448.2116394042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSEGPSYAK_	ENSG00000105197|ENST00000607714|TIMM50;ENST00000595286.1_1_19:39971511-39973801:+|nuORF;ENST00000598125.5_1_19:39971493-39973604:+|nuORF;nc|ENSG00000105197|Q3ZCQ8-2|TIMM50;TIMM50|p.H211Mfs*21|1|0.44|ENSG00000105197|chr19:39486426-39486426|C/-|frameshift_variant	54.776311868738084	0.25715957988447635	1				NaN	NaN	0	NaN	988	2918	3907
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3915	16.853	NaN	5067.3	30	0	1999.7	0.214	+			6353	AVTSGVATK	9	49	417.2400953988342	832.4656378644685	2	417.2396545410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVTSGVATK_	ENSG00000249992|ENST00000503771|TMEM158;nc|ENSG00000249992|Q8WZ71-2|TMEM158	98.58198989935565	0.04066992115528678	1				NaN	NaN	0	NaN	992	2921	3914
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3916	16.857	NaN	1979.4	30	0	313.99	0.106	+			31071	QFCLTQGLF	9	55	528.7604118075994	1055.5062706819988	2	528.7611694335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QFCLTQGLF_	nc|ENSG997|Q9N2J8|HERV-H-ENH3	49.44154591367651	0.3095138337212152	1				NaN	NaN	0	NaN	993	2921	3914
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3917	16.859	NaN	1892.5	30	0	425.36	0.106	+			22514	KTQEIFHSK	9	50	559.3037135118474	1116.5928740904947	2	559.3036499023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KTQEIFHSK_	ENSG00000108557|ENST00000353383|RAI1;nc|ENSG00000258436|Q7Z5J4-2|RAI1;nc|ENSG00000258436|Q7Z5J4-3|RAI1	65.15724298150197	0.17062369902793603	1				NaN	NaN	0	NaN	994	2921	3914
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3918	16.861	NaN	4315.3	30	0	1685.6	0.037	+			19675	KDNEIRKNT	9	58	373.2046583997942	1116.5921457995826	3	373.53863525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KDNEIRKNT_	tr|U7T1X1|U7T1X1_FUSNUPhophatidylinositol-4-phosphate5-kinaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00620PE=4SV=1	65.46538089061403	0.16805504838372562	1				NaN	NaN	0	NaN	995	2921	3914
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3926	16.88	NaN	1755	30	0	286.44	0.214	+			42481	TANDANTKY	9	47	499.2329493014654	996.4513456697308	2	499.23345947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TANDANTKY_	ENSG00000149182|ENST00000524782|ARFGAP2;ENST00000395449.7_1_11:47187835-47198404:-|nuORF;ENST00000524727.5_1_11:47194869-47198404:-|nuORF;ENST00000527097.5_1_11:47193699-47198404:-|nuORF;nc|ENSG00000149182|Q8N6H7-2|ARFGAP2	79.48907831485694	0.09975780661107167	1				NaN	NaN	0	NaN	1000	2924	3925
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3927	16.884	NaN	2583.7	30	0	611.94	0.036	+			48040	VSRYNIKGK	9	35	355.54499058436164	1063.613142353285	3	355.8793640136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSRYNIKGK_	tr|U7STY8|U7STY8_FUSNUAAAdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01035PE=4SV=1	21.9598887501803	0.5980208138527809	1				NaN	NaN	0	NaN	1001	2924	3925
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3934	16.902	NaN	1622.1	30	0	199.78	0.142	+			19323	KAHLGTALK	9	46	469.7935009608275	NaN	0	469.793701171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAHLGTALK_	ENSG00000186468|ENST00000296674|RPS23;RPS23|p.N39T|1|0.25|ENSG00000186468|chr5:82277741-82277741|T/G|missense_variant	56.43379154798735	0.16452882468284893	1				NaN	NaN	0	NaN	1005	2927	3933
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3940	16.92	NaN	1764	30	0	298.92	0.214			+	-1	QYGQPCMC	8	54	522.1922264271258	1042.3698999210515	2	522.1932373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_QYGQPC(Carbamidomethyl (C))MC(Carbamidomethyl (C))_	REV__ENSG00000115380|ENST00000355426|EFEMP1;REV__nc|ENSG00000115380|Q12805-2|EFEMP1;REV__nc|ENSG00000115380|Q12805-3|EFEMP1;REV__nc|ENSG00000115380|Q12805-4|EFEMP1;REV__nc|ENSG00000115380|Q12805-5|EFEMP1	44.53106598305862	0.628196326904373	1				NaN	NaN	0	NaN	1008	2930	3939
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3941	16.924	NaN	739.54	30	0	85.975	0.106	+			39341	STCGKCGYPAK	11	41	557.7554147475417	NaN	0	557.7554931640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STCGKCGYPAK_	ENSG00000145592|ENST00000274242|RPL37;ENST00000504562.1_1_5:40832608-40835123:-|nuORF;ENST00000507642.5_1_5:40832592-40834660:-|nuORF	47.95952297671804	0.32997419910078585	1				NaN	NaN	0	NaN	1009	2930	3939
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3942	16.926	NaN	2249.2	30	0	573.25	0.038			+	-1	ATKAYHNLMQ	10	30	398.1974707415146	1191.570582824744	3	398.19793701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_ATKAYHNLM(Oxidation (M))Q_	REV__ENSG00000138892|ENST00000433387|TTLL8;REV__nc|ENSG00000138892|A6PVC2-2|TTLL8;REV__nc|ENSG00000138892|A6PVC2|TTLL8	27.047317107675042	0.6589519614906109	1				NaN	NaN	0	NaN	1010	2930	3939
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3952	16.949	NaN	6341.5	30	0	937.59	0.214			+	7709	DLQQNIRTV	9	62	543.7989729134226	1085.5833928936452	2	543.7999267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DLQQNIRTV_	REV__ENSG00000006788|ENST00000252172|MYH13;REV__ENSG00000109061|ENST00000226207|MYH1;REV__ENSG00000109063|ENST00000583535|MYH3;REV__ENSG00000133020|ENST00000403437|MYH8;REV__ENSG00000264424|ENST00000255381|MYH4;REV__MYH1|p.M442T|1|0.04|ENSG00000109061|chr17:10511930-10511930|A/G|missense_variant;REV__MYH1|p.N889Mfs*24|1|0.19|ENSG00000109061|chr17:10504835-10504835|T/-|frameshift_variant;REV__MYH13|p.K1396Nfs*37|1|0.46|ENSG00000006788|chr17:10312751-10312751|T/-|frameshift_variant;REV__MYH4|p.N981Tfs*16|1|0.12|ENSG00000264424|chr17:10453321-10453321|T/-|frameshift_variant;REV__MYH8|p.E1123Gfs*19|1|0.39|ENSG00000133020|chr17:10400757-10400758|-/C|frameshift_variant;REV__MYH8|p.I922Nfs*6|1|0.33|ENSG00000133020|chr17:10401709-10401710|-/T|frameshift_variant;REV__MYH8|p.K1582Nfs*3|1|0.04|ENSG00000133020|chr17:10395349-10395350|-/G|frameshift_variant;REV__MYH8|p.N600Ifs*5|1|0.32|ENSG00000133020|chr17:10409377-10409377|T/-|frameshift_variant	75.04331003522576	0.118981335847003	1				NaN	NaN	0	NaN	1017	2933	3951
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3953	16.953	NaN	3223.3	30	0	485.17	0.106	+			22768	KVFDAKPSAK	10	65	545.8166104665295	1089.6186679998589	2	545.8174438476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVFDAKPSAK_	ENSG00000143889|ENST00000449105|HNRNPLL;nc|ENSG00000143889|Q8WVV9-4|HNRNPLL;nc|ENSG00000143889|Q8WVV9-5|HNRNPLL	160.9127304478731	0.006557902026845906	1				NaN	NaN	0	NaN	1018	2933	3951
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3954	16.955	NaN	4636.6	30	0	1370.1	0.036	+			35151	SAIDKMTKK	9	44	341.1951946739862	1020.5637546221585	3	341.1952819824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAIDKMTKK_	CTNNA1|p.K493Nfs*31|1|0.19|ENSG00000044115|chr5:138917827-138917827|A/-|frameshift_variant;CTNNA1|p.T832*|1|0.29|ENSG00000044115|chr5:138933859-138933862|CAGA/-|frameshift_variant;ENSG00000044115|ENST00000302763|CTNNA1;ENST00000515849.2_1_5:114726864-114727050:-|nuORF;ENST00000517534.5_1_5:138163374-138223382:+|nuORF;nc|ENSG00000044115|P35221-2|CTNNA1	49.44154591367651	0.3095138337212152	1				NaN	NaN	0	NaN	1019	2933	3951
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3962	16.975	NaN	1914.9	30	0	543.49	0.214	+			14078	GSLEKSVTK	9	56	474.7718125788601	947.5290722245202	2	474.7720031738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSLEKSVTK_	ENSG00000149262|ENST00000534064|INTS4;ENST00000433818.6_1_11:77629258-77692594:-|nuORF;nc|ENSG00000149262|Q96HW7-2|INTS4;nc|ENSG00000149262|Q96HW7-3|INTS4	59.93077597824379	0.21419174904018318	1				NaN	NaN	0	NaN	1024	2936	3961
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3963	16.978	NaN	1426.2	30	0	298.27	0.106	+			46269	VEHETQKL	8	51	492.26112499143284	982.5076970496657	2	492.2613525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VEHETQKL_	ENSG00000065613|ENST00000369755|SLK;ENSG00000072786|ENST00000176763|STK10;ENST00000517360.1_1_5:171471888-171480055:-|nuORF;nc|ENSG00000065613|Q9H2G2-2|SLK	68.78682469695295	0.41700713582915416	1				NaN	NaN	0	NaN	1025	2936	3961
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3964	16.98	NaN	732.73	30	0	221.49	0.106	+			37304	SLDFEIRS	8	33	483.74984557047367	NaN	0	483.7491455078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLDFEIRS_	ENSG00000125945|ENST00000314011|ZNF436;ZNF436|p.Q213Pfs*14|1|0.33|ENSG00000125945|chr1:23362744-23362745|-/GATG|frameshift_variant	40.5726180659479	1.7418937515398478	1				NaN	NaN	0	NaN	1026	2936	3961
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3965	16.982	NaN	1065.3	30	0	294.89	0.037	+			13606	GLWGKGVVRK	10	33	367.2307434082031	NaN	0	367.2307434082031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GLWGKGVVRK_	ENST00000606645.1_1_1:2478503-2478548:+|nuORF	36.446750945000026	0.3805027428805705	1				NaN	NaN	0	NaN	1027	2936	3961
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3996	17.059	NaN	101880	30	0	17728	0.214				-1	 	0	92	466.28174833556176	930.5489437379235	2	466.2820129394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	1049	2945	3995
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3997	17.063	NaN	9174.9	30	0	2985.6	0.106	+			382	AASEAGRAM	9	64	432.2052705476084	862.3959881620168	2	432.20556640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AASEAGRAM_	ENSG00000071859|ENST00000393600|FAM50A	71.87747018426188	0.13267044672804276	1				NaN	NaN	0	NaN	1050	2945	3995
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3998	17.065	NaN	1805.4	30	0	232.67	0.106			+	19817	KEDGARRR	8	51	494.2755432128906	NaN	0	494.2755432128906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEDGARRR_	REV__ENST00000426882.5_1_6:30294481-30294724:-|nuORF	35.61828744233558	1.7418937515398478	1				NaN	NaN	0	NaN	1051	2945	3995
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3999	17.067	NaN	1090.9	30	0	377.83	0.106	+			25003	LLFPTPALCQ	10	36	368.2043845767381	1101.5913243304144	3	368.2046813964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LLFPTPALCQ_	ENST00000551245.5_1_12:49724607-49724727:+|nuORF	20.94693142431847	0.7087701759873708	1				NaN	NaN	0	NaN	1052	2945	3995
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4000	17.069	NaN	1499.8	30	0	247.12	0.034			+	44424	TSLSGSIAAAA	11	46	474.75327810562794	947.4920032780559	2	474.75250244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TSLSGSIAAAA_	REV__ENST00000361162.10_1_20:34330053-34330200:-|nuORF	31.529811441608018	0.6590691889962369	1				NaN	NaN	0	NaN	1053	2945	3995
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4011	17.094	NaN	6976	30	0	2129.9	0.214	+			15084	GTQGSPITK	9	53	444.74269267361234	887.4708324140247	2	444.7429504394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTQGSPITK_	ENSG00000110237|ENST00000263674|ARHGEF17;ENST00000536481.1_1_11:73075528-73075729:+|nuORF	125.71293069911285	0.017741295328254008	1				NaN	NaN	0	NaN	1061	2948	4010
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4012	17.097	NaN	6737.4	30	0	1198.3	0.106	+			35005	SACHKYFEK	9	68	390.51799859335995	1168.53216638028	3	390.8526306152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SAC(Carbamidomethyl (C))HKYFEK_	ENSG00000163993|ENST00000296370|S100P;ENST00000513778.1_1_4:6695618-6698766:+|nuORF;S100P|p.T82M|1|0.3|ENSG00000163993|chr4:6696999-6696999|C/T|missense_variant	75.04331003522576	0.118981335847003	1				NaN	NaN	0	NaN	1062	2948	4010
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4013	17.099	NaN	1058.3	30	0	252.65	0.106	+			34296	RTLNKVAMK	9	44	530.8185756324528	1059.6225983317056	2	530.8192749023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RTLNKVAMK_	COPG1|p.V308I|1|0.46|ENSG00000181789|chr3:129260383-129260383|G/A|missense_variant;ENSG00000158623|ENST00000425248|COPG2;ENSG00000181789|ENST00000314797|COPG1;nc|ENSG00000158623|Q9UBF2-2|COPG2	18.262085536374414	0.6112419832031293	1				NaN	NaN	0	NaN	1063	2948	4010
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4014	17.101	NaN	312	30	0	27.631	0.106	+			20448	KEVEERPAP	9	28	527.7803344726562	NaN	0	527.7803344726562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEVEERPAP_	ENSG00000130429|ENST00000646101|ARPC1B	22.579656572578934	0.3605601358598771	1				NaN	NaN	0	NaN	1064	2948	4010
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4015	17.103	NaN	1537.4	30	0	159.62	0.106			+	33517	RKQLYNTREIK	11	52	483.61516654302227	1447.8236702292668	3	483.6151428222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RKQLYNTREIK_	REV__ASPM|p.I1717Nfs*24|1|0.43|ENSG00000066279|chr1:197104101-197104102|-/T|frameshift_variant;REV__ASPM|p.I3229Nfs*2|1|0.48|ENSG00000066279|chr1:197090339-197090340|-/T|frameshift_variant;REV__ASPM|p.L1872Ffs*24|1|0.43|ENSG00000066279|chr1:197103635-197103636|-/A|frameshift_variant;REV__ASPM|p.M2261*|1|0.44|ENSG00000066279|chr1:197102470-197102470|T/-|frameshift_variant;REV__ASPM|p.N1680Kfs*11|1|0.33|ENSG00000066279|chr1:197104211-197104212|-/T|frameshift_variant;REV__ASPM|p.Q2620Nfs*22|1|0.15|ENSG00000066279|chr1:197101393-197101394|-/TT|frameshift_variant;REV__ASPM|p.Q2620Tfs*17|1|0.19|ENSG00000066279|chr1:197101393-197101394|-/T|frameshift_variant;REV__ENSG00000066279|ENST00000367409|ASPM	14.086013023434994	0.8045329596154472	1				NaN	NaN	0	NaN	1065	2948	4010
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4016	17.105	NaN	697.52	30	0	116.96	0.033	+			13234	GIKHELQA	8	37	448.2533191197508	NaN	0	448.2528381347656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GIKHELQA_	ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65622809-65623088:-|nuORF	38.80614096846853	1.7418937515398478	1				NaN	NaN	0	NaN	1066	2948	4010
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4027	17.13	NaN	7534.4	30	0	2107.6	0.214	+			40245	STSGTVINK	9	57	453.74809704605804	905.4816411589161	2	453.74774169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STSGTVINK_	CHFR|p.L97Tfs*14|1|0.63|ENSG00000072609|chr12:132872338-132872339|AA/-|frameshift_variant;ENSG00000072609|ENST00000450056|CHFR;ENST00000535181.5_1_12:133448808-133463914:-|nuORF;ENST00000536196.1_1_12:133448709-133463914:-|nuORF;nc|ENSG00000072609|Q96EP1-3|CHFR;nc|ENSG00000072609|Q96EP1-4|CHFR;nc|ENSG00000072609|Q96EP1-5|CHFR;nc|ENSG00000072609|Q96EP1|CHFR	125.81401957644128	0.01768009863045738	1				NaN	NaN	0	NaN	1074	2951	4026
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4028	17.134	NaN	5341.2	30	0	2018.2	0.106	+			40372	STTTTQITK	9	57	490.7665614958473	979.5185700584947	2	490.76678466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STTTTQITK_	ENSG00000159023|ENST00000343067|EPB41;ENST00000462032.1_1_1:29424324-29436027:+|nuORF;nc|ENSG00000159023|P11171-2|EPB41;nc|ENSG00000159023|P11171-3|EPB41;nc|ENSG00000159023|P11171-5|EPB41;nc|ENSG00000159023|P11171-6|EPB41	76.16968421966216	0.11411088698345859	1				NaN	NaN	0	NaN	1075	2951	4026
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4029	17.135	NaN	686.86	30	0	295.96	0.106	+			43562	THYTLLFTH	9	25	566.7911987304688	NaN	0	566.7911987304688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_THYTLLFTH_	ENSG00000119227|ENST00000412723|PIGZ;PIGZ|p.T490Lfs*10|1|0.26|ENSG00000119227|chr3:196947430-196947430|C/-|frameshift_variant	16.473147378115264	0.38122769658151995	1				NaN	NaN	0	NaN	1076	2951	4026
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4030	17.137	NaN	1190.7	30	0	246.15	0.034				-1	QQTLIICP	8	47	486.7643388465075	971.514124759815	2	486.7638244628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_QQTLIIC(Carbamidomethyl (C))P_	ENSG00000110422|ENST00000303296|HIPK3;nc|ENSG00000110422|Q9H422-2|HIPK3	31.954861631926434	0.7126016770032289	1				NaN	NaN	0	NaN	1077	2951	4026
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4041	17.162	NaN	6164.7	30	0	1513.7	0.214	+			35100	SAGDVAVQK	9	59	437.7350074234415	873.455461913683	2	437.7348327636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAGDVAVQK_	ENSG00000164574|ENST00000297107|GALNT10;ENST00000517958.1_1_5:153783698-153796529:+|nuORF;ENST00000520647.5_1_5:153755841-153792087:+|nuORF;nc|ENSG00000164574|Q86SR1-2|GALNT10;nc|ENSG00000164574|Q86SR1-4|GALNT10	129.42129120953632	0.01549634589885217	1				NaN	NaN	0	NaN	1085	2954	4040
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4042	17.166	NaN	3165.3	30	0	433.08	0.106	+			35978	SEHAVNKQL	9	58	513.2723321014822	1024.5301112697643	2	513.27294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEHAVNKQL_	ENSG00000166595|ENST00000422424|CIAO2B;ENST00000562362.5_1_16:66966108-66968009:-|nuORF	90.36981228632155	0.0638227155548745	1				NaN	NaN	0	NaN	1086	2954	4040
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4043	17.168	NaN	2760.6	30	0	1166.3	0.034			+	21905	KRSMLLAQ	8	40	481.77621926489246	961.5378855965849	2	481.77606201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_KRSM(Oxidation (M))LLAQ_	REV__ENSG00000168026|ENST00000683103|TTC21A;REV__nc|ENSG00000168026|Q8NDW8-5|TTC21A;REV__nc|ENSG00000168026|Q8NDW8-6|TTC21A;REV__nc|ENSG00000168026|Q8NDW8-7|TTC21A;REV__nc|ENSG00000168026|Q8NDW8|TTC21A;REV__TTC21A|p.L505Pfs*116|1|0.3|ENSG00000168026|chr3:39126352-39126353|-/C|frameshift_variant	47.657333605630114	0.6087971902037268	1				NaN	NaN	0	NaN	1087	2954	4040
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4054	17.193	NaN	1583.3	30	0	419.99	0.214	+			3642	ASYENVRAK	9	25	346.51699733363034	1036.529162601091	3	346.5172424316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASYENVRAK_	ENSG00000128340|ENST00000249071|RAC2	32.81241826257853	0.4965981579233955	1				NaN	NaN	0	NaN	1095	2957	4053
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4055	17.197	NaN	1192.5	30	0	182.42	0.106	+			33811	RQSCVMVQK	9	50	568.2897912578109	NaN	0	568.2900390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_RQSC(Carbamidomethyl (C))VMVQK_	ENSG00000128833|ENST00000261839|MYO5C;ENST00000558902.5_1_15:52529812-52548856:-|nuORF;ENST00000560809.5_1_15:52532054-52548856:-|nuORF;MYO5C|p.E1050Sfs*8|1|0.32|ENSG00000128833|chr15:52229192-52229192|C/-|frameshift_variant;MYO5C|p.L1151Wfs*19|1|0.17|ENSG00000128833|chr15:52223719-52223719|A/-|frameshift_variant;MYO5C|p.L933Hfs*33|1|0.04|ENSG00000128833|chr15:52237552-52237553|-/T|frameshift_variant;MYO5C|p.L933Sfs*35|1|0.04|ENSG00000128833|chr15:52237553-52237554|-/AAGTGGA|frameshift_variant	70.8162118820467	0.10318768208603292	1				NaN	NaN	0	NaN	1096	2957	4053
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4056	17.199	NaN	1196.8	30	0	312.16	0.036	+			30543	QAKQESTEY	9	45	542.2513229885566	1082.488093043913	2	542.2523803710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QAKQESTEY_	ENSG00000026025|ENST00000544301|VIM;ENST00000421459.2_2_10:17272631-17276850:+|nuORF;VIM|p.R310C|1|0.13|ENSG00000026025|chr10:17234738-17234738|C/T|missense_variant	59.93077597824379	0.21419174904018318	1				NaN	NaN	0	NaN	1097	2957	4053
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4068	17.224	NaN	4506.2	30	0	417.21	0.214	+			38278	SQQKVVITK	9	68	515.8164281429201	1029.6183033526402	2	515.8169555664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SQQKVVITK_	ENSG00000007952|ENST00000372966|NOX1;ENSG00000165168|ENST00000378588|CYBB;nc|ENSG00000007952|Q9Y5S8-3|NOX1;NOX1|p.R290H|1|0.17|ENSG00000007952|chrX:100851261-100851261|C/T|missense_variant	131.115847015877	0.014647977962315902	1				NaN	NaN	0	NaN	1106	2960	4067
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4069	17.228	NaN	1824.8	30	0	548.39	0.106	+			36707	SGSLSGGSVI	10	36	432.2271145623892	862.4396761915784	2	432.22723388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SGSLSGGSVI_	DGKD|p.P733S|1|0.13|ENSG00000077044|chr2:233451993-233451993|C/T|missense_variant	40.77816245573522	0.5419747034533848	1				NaN	NaN	0	NaN	1107	2960	4067
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4070	17.23	NaN	5364.8	30	0	2026.3	0.106				-1	GTCASWRGK	9	31	341.4992801448364	1021.4760110347092	3	341.49951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_GTC(Carbamidomethyl (C))ASWRGK_	ENSG00000265972|ENST00000582401|TXNIP;ENST00000488537.1_1_1:145440216-145440639:+|nuORF;nc|ENSG00000265972|Q9H3M7-2|TXNIP	32.81241826257853	0.4965981579233955	1				NaN	NaN	0	NaN	1108	2960	4067
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4071	17.231	NaN	2426.8	30	0	632.16	0.106			+	22121	KSNSLPCIRSS	11	39	397.874755859375	NaN	0	397.874755859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KSNSLPCIRSS_	REV__sp|F5HC33|US09_HCMVMMembraneglycoproteinUS9OS=Humancytomegalovirus(strainMerlin)OX=295027GN=US9PE=3SV=1;REV__sp|P09729|US09_HCMVAUniqueshortUS9glycoproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=US9PE=3SV=1	29.550750289552195	0.43372083775723597	1				NaN	NaN	0	NaN	1109	2960	4067
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4072	17.233	NaN	330.45	30	0	42.863	0.035			+	31462	QKVAIERDG	9	21	508.28033447265625	NaN	0	508.28033447265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QKVAIERDG_	REV__ENST00000495993.1_1_3:53905208-53907064:-|nuORF	16.473147378115264	0.38122769658151995	1				NaN	NaN	0	NaN	1110	2960	4067
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4082	17.257	NaN	7874.4	30	0	1665.7	0.214	+			22095	KSMNANTITK	10	69	554.2948133626594	1106.5750737921187	2	554.2958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSMNANTITK_	ENSG00000175467|ENST00000312397|SART1	136.48854661914896	0.011690315628778602	1				NaN	NaN	0	NaN	1117	2963	4081
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4083	17.26	NaN	5343.2	30	0	1238.1	0.106	+			37404	SLGGHSISK	9	60	443.2428118379582	884.4710707427164	2	443.2431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLGGHSISK_	ENSG00000189144|ENST00000536220|ZNF573;ZNF573|p.V65L|1|0.4|ENSG00000189144|chr19:37771573-37771573|C/A|missense_variant	155.5846463517096	0.005567437401040498	1				NaN	NaN	0	NaN	1118	2963	4081
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4084	17.262	NaN	2162.1	30	0	202.39	0.106			+	29655	PGLAQTKYAE	10	68	539.2815143323608	1076.5484757315214	2	539.2821655273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PGLAQTKYAE_	REV__ENSG00000196498|ENST00000405201|NCOR2;REV__nc|ENSG00000196498|Q9Y618-4|NCOR2;REV__nc|ENSG00000196498|Q9Y618-5|NCOR2;REV__NCOR2|p.L1405*|1|0.44|ENSG00000196498|chr12:124346710-124346710|G/-|frameshift_variant	62.107414245175825	0.3466735403679669	1				NaN	NaN	0	NaN	1119	2963	4081
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4085	17.264	NaN	3524.6	30	0	327.27	0.036	+			34162	RTASFAVRK	9	51	345.87335278861167	1034.598228966035	3	345.8734436035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RTASFAVRK_	ENSG00000100347|ENST00000350028|SAMM50;ENST00000474323.5_1_22:44371844-44392260:+|nuORF	60.11826168202944	0.21262886028301267	1				NaN	NaN	0	NaN	1120	2963	4081
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4094	17.286	NaN	3020.5	30	0	404.3	0.214	+			16377	HENESVYKA	9	65	538.753589205545	1075.49262547789	2	538.7543334960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HENESVYKA_	ENSG00000182481|ENST00000330459|KPNA2;ENST00000578492.5_1_17:62746826-62750158:-|nuORF	86.88156770896713	0.07365720931774442	1				NaN	NaN	0	NaN	1126	2966	4093
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4095	17.289	NaN	12995	30	0	4832.7	0.106	+			4254	ATGESIAVKK	10	51	335.19753542144525	1002.5707768645358	3	335.19744873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATGESIAVKK_	DCLRE1C|p.R685Efs*6|1|0.37|ENSG00000152457|chr10:14908434-14908434|T/-|frameshift_variant;ENSG00000152457|ENST00000378278|DCLRE1C;nc|ENSG00000152457|Q96SD1-2|DCLRE1C;nc|ENSG00000152457|Q96SD1-3|DCLRE1C	76.16968421966216	0.22691431239609447	1				NaN	NaN	0	NaN	1127	2966	4093
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4096	17.291	NaN	5269.4	30	0	909.06	0.106			+	41663	SVRLEQAPC	9	66	501.7559078312889	1001.4972627293778	2	501.7554626464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVRLEQAPC_	REV__ENST00000311481.10_1_11:66043945-66044302:+|nuORF	47.657333605630114	0.33044192980041115	1				NaN	NaN	0	NaN	1128	2966	4093
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4097	17.293	NaN	1180.5	30	0	399	0.035	+			33529	RLAALGQLHG	10	37	518.3070068359375	NaN	0	518.3070068359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RLAALGQLHG_	ENST00000494995.5_1_1:155580896-155583988:+|nuORF	20.94693142431847	0.4201028297492154	1				NaN	NaN	0	NaN	1129	2966	4093
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4109	17.318	NaN	2167.6	30	0	304.41	0.214	+			34348	RTQEEIVAK	9	59	537.3013559172355	1072.5881589012708	2	537.3023681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTQEEIVAK_	ENSG00000155660|ENST00000652332|PDIA4	63.42647028704847	0.1850514934184437	1				NaN	NaN	0	NaN	1138	2969	4108
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4110	17.322	NaN	1690.6	30	0	475.35	0.106	+			12318	GDGPIKSK	8	44	401.22691679920626	800.4392806652126	2	401.2271423339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GDGPIKSK_	ENSG00000120156|ENST00000380036|TEK;nc|ENSG00000120156|Q02763-2|TEK;nc|ENSG00000120156|Q02763-3|TEK;TEK|p.E624Nfs*33|1|0.41|ENSG00000120156|chr9:27197556-27197556|G/-|frameshift_variant;TEK|p.N809Tfs*21|1|0.22|ENSG00000120156|chr9:27206639-27206639|A/-|frameshift_variant;TEK|p.N884Kfs*6|1|0.16|ENSG00000120156|chr9:27209197-27209197|C/-|frameshift_variant;TEK|p.S586Vfs*12|1|0.27|ENSG00000120156|chr9:27197441-27197441|A/-|frameshift_variant	62.107414245175825	0.4809183816468817	1				NaN	NaN	0	NaN	1139	2969	4108
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4111	17.324	NaN	6792.4	30	0	1356.1	0.106	+			44701	TTKHYVIIHQ	10	58	413.8983078159595	1238.6730940480786	3	414.2330627441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TTKHYVIIHQ_	ENSG00000256087|ENST00000221315|ZNF432	68.84614121027924	0.2867470276772903	1				NaN	NaN	0	NaN	1140	2969	4108
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4112	17.326	NaN	574.67	30	0	85.517	0.106	+			12718	GEKTDRVGV	9	34	480.75927734375	NaN	0	480.75927734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEKTDRVGV_	ENSG00000204120|ENST00000373563|GIGYF2;GIGYF2|p.A735Yfs*90|1|0.05|ENSG00000204120|chr2:232815731-232815732|-/TACACACATG|frameshift_variant;GIGYF2|p.L491Ffs*6|1|0.38|ENSG00000204120|chr2:232794934-232794935|-/T|frameshift_variant;GIGYF2|p.L631*|1|0.4|ENSG00000204120|chr2:232809801-232809801|T/-|frameshift_variant;GIGYF2|p.L640Wfs*27|1|0.5|ENSG00000204120|chr2:232811261-232811261|T/-|frameshift_variant;nc|ENSG00000204120|Q6Y7W6-3|GIGYF2;nc|ENSG00000204120|Q6Y7W6-4|GIGYF2;nc|ENSG00000204120|Q6Y7W6-5|GIGYF2	21.68575002086885	0.36358557434667943	1				NaN	NaN	0	NaN	1141	2969	4108
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4113	17.327	NaN	764.54	30	0	228.7	0.034			+	36612	SGFCSTLGSS	10	37	473.2027587890625	NaN	0	473.2027587890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SGFCSTLGSS_	REV__ENSG00000221843|ENST00000447166|C2orf16	34.172542307311794	0.38797011891751465	1				NaN	NaN	0	NaN	1142	2969	4108
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4123	17.351	NaN	5858.2	30	0	1776.6	0.214	+			4739	ATMPKKGILKK	11	53	405.5930849033292	1213.7574253101877	3	405.5934143066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATMPKKGILKK_	ENSG00000074590|ENST00000261402|NUAK1;NUAK1|p.P507Rfs*6|1|0.5|ENSG00000074590|chr12:106067268-106067268|G/-|frameshift_variant	41.080066990542036	0.5431644350485484	1				NaN	NaN	0	NaN	1149	2972	4122
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4124	17.354	NaN	3732.6	30	0	653.97	0.106	+			22336	KTGEVLDTK	9	54	495.7772745760692	989.5399962189384	2	495.7774658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTGEVLDTK_	ENSG00000196937|ENST00000359943|FAM3C	80.45461616416974	0.09558281504443908	1				NaN	NaN	0	NaN	1150	2972	4122
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4125	17.356	NaN	1399	30	0	546.37	0.036	+			23735	LAWVADKRL	9	23	357.8805392428247	NaN	0	357.8807678222656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LAWVADKRL_	ENSG00000100678|ENST00000356921|SLC8A3;nc|ENSG00000100678|P57103-3|SLC8A3;nc|ENSG00000100678|P57103-6|SLC8A3;nc|ENSG00000100678|P57103-7|SLC8A3;nc|ENSG00000100678|P57103|SLC8A3	29.14955571784316	0.3303970763161698	1				NaN	NaN	0	NaN	1151	2972	4122
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4132	17.374	NaN	5198.2	30	0	1244.2	0.214				-1	MTNEKTTK	8	57	484.73929949827993	967.4640460633599	2	484.7394714355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))TNEKTTK_	chr10:128113602-128116491|398|11.56|0.71|4.03|-|ENST00000368653|MKI67,MKI67;ENSG00000148773|ENST00000368654|MKI67;MKI67|p.L2374*|1|0.28|ENSG00000148773|chr10:128104719-128104719|A/-|frameshift_variant;MKI67|p.R3036Yfs*27|1|0.04|ENSG00000148773|chr10:128102735-128102736|-/AAAATAA|frameshift_variant;nc|ENSG00000148773|P46013-2|MKI67	53.351449002276354	0.5676011784961348	1				NaN	NaN	0	NaN	1155	2975	4131
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4133	17.378	NaN	1758.8	30	0	216.04	0.106	+			34456	RTYSGPMNK	9	50	527.2610983443647	1052.5076437555292	2	527.2613525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RTYSGPMNK_	ENSG00000124429|ENST00000262753|POF1B;nc|ENSG00000124429|Q8WVV4-1|POF1B;nc|ENSG00000124429|Q8WVV4-3|POF1B;POF1B|p.T130Lfs*12|1|0.14|ENSG00000124429|chrX:85359600-85359601|-/AG|frameshift_variant	53.08895987439943	0.27122541748218487	1				NaN	NaN	0	NaN	1156	2975	4131
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4134	17.38	NaN	2251.6	30	0	255.86	0.106			+	15874	GYNAGLVQ	8	47	411.2107790963198	820.4070052594396	2	411.21124267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GYNAGLVQ_	REV__ETV5|p.A107V|1|0.38|ENSG00000244405|chr3:186081088-186081088|G/A|missense_variant	40.5726180659479	0.6527593143185008	1				NaN	NaN	0	NaN	1157	2975	4131
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4135	17.382	NaN	729.48	30	0	407.69	0.035				-1	LLHCGRFQ	8	23	515.7666625976562	NaN	0	515.7666625976562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_LLHC(Carbamidomethyl (C))GRFQ_	DST|p.K5076Nfs*24|1|0.31|ENSG00000151914|chr6:56472218-56472218|T/-|frameshift_variant;DST|p.T4428Nfs*23|1|0.12|ENSG00000151914|chr6:56497896-56497897|-/T|frameshift_variant;ENSG00000151914|ENST00000680361|DST;nc|ENSG00000151914|Q03001-14|DST;nc|ENSG00000151914|Q03001-8|DST;nc|ENSG00000151914|Q03001|DST	20.481830146152948	1.741893751539848	1				NaN	NaN	0	NaN	1158	2975	4131
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4146	17.407	NaN	2857.3	30	0	610.08	0.214			+	7131	DAASIKKAK	9	59	466.28199419625895	NaN	0	466.28167724609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DAASIKKAK_	REV__ENSG00000138496|ENST00000682323|PARP9;REV__nc|ENSG00000138496|Q8IXQ6|PARP9	76.7741389293348	0.08243745921263976	1				NaN	NaN	0	NaN	1166	2978	4145
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4147	17.41	NaN	3688.5	30	0	830.28	0.106	+			5520	AVAHALTEK	9	57	470.2662678525717	938.5179827719434	2	470.26617431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVAHALTEK_	ENSG00000163468|ENST00000295688|CCT3;nc|ENSG00000163468|P49368-2|CCT3	143.8867514904718	0.008656634767784652	1				NaN	NaN	0	NaN	1167	2978	4145
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4148	17.412	NaN	3320	30	0	852.5	0.036	+			41803	SVSRSPVPEK	10	65	543.3008840560327	1084.5872151788653	2	543.30126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVSRSPVPEK_	ENSG00000100650|ENST00000557154|SRSF5;ENST00000554465.5_1_14:70237039-70238175:+|nuORF;ENST00000554929.1_1_14:70237619-70238175:+|nuORF;nc|ENSG00000100650|Q13243-3|SRSF5	92.23892857375223	0.11825556496531454	1				NaN	NaN	0	NaN	1168	2978	4145
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4158	17.436	NaN	1799.5	30	0	306.98	0.142	+			38457	SSAQVSTVGQ	10	57	482.24084565314433	962.4671383730887	2	482.24102783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSAQVSTVGQ_	ENSG00000100354|ENST00000454349|TNRC6B;nc|ENSG00000100354|Q9UPQ9-1|TNRC6B;TNRC6B|p.A1354Tfs*46|1|0.47|ENSG00000100354|chr22:40301265-40301266|-/ACCCAAC|frameshift_variant;TNRC6B|p.E751Rfs*41|1|0.08|ENSG00000100354|chr22:40266476-40266476|G/-|frameshift_variant;TNRC6B|p.E999Rfs*48|1|0.29|ENSG00000100354|chr22:40273449-40273449|G/-|frameshift_variant;TNRC6B|p.G1342Wfs*56|1|0.32|ENSG00000100354|chr22:40301234-40301235|-/T|frameshift_variant;TNRC6B|p.L546Sfs*63|1|0.35|ENSG00000100354|chr22:40265862-40265862|C/-|frameshift_variant;TNRC6B|p.N758Tfs*34|1|0.18|ENSG00000100354|chr22:40266498-40266498|A/-|frameshift_variant;TNRC6B|p.Y593Tfs*16|1|0.8|ENSG00000100354|chr22:40266006-40266006|G/-|frameshift_variant	70.8162118820467	0.27065172005956	1				NaN	NaN	0	NaN	1175	2981	4157
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4167	17.459	NaN	59239	30	0	15006	0.214			+	38233	SQLFGQSLLDP	11	86	402.2118606101744	1203.6137524307233	3	402.2124938964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SQLFGQSLLDP_	REV__ENSG00000178171|ENST00000321420|AMER3	48.601550744091256	0.44024757269956427	1				NaN	NaN	0	NaN	1181	2984	4166
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4168	17.463	NaN	5780.4	30	0	1717.4	0.106	+			49173	VVMRDPNTK	9	73	530.2840636718565	1058.553574410513	2	530.2853393554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVMRDPNTK_	chr12:54282662-54282800|482|460.96|0.0|25.46|+|ENST00000677249|HNRNPA1,HNRNPA1;ENSG00000135486|ENST00000340913|HNRNPA1;ENSG00000139675|ENST00000357495|HNRNPA1L2;ENSG00000224578|ENST00000565308|HNRNPA1L3;ENST00000441603.1_1_11:5593122-5593311:-|nuORF;ENST00000452488.1_1_2:41383770-41384067:+|nuORF;ENST00000457695.2_1_X:100110922-100111255:-|nuORF;ENST00000575692.1_1_17:2210089-2210875:+|nuORF;nc|ENSG00000135486|P09651-2|HNRNPA1;nc|ENSG00000135486|P09651-3|HNRNPA1	66.9202029811203	0.15592758990009112	1				NaN	NaN	0	NaN	1182	2984	4166
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4169	17.465	NaN	4349.3	30	0	1700.6	0.037				-1	SVLILVGFGAC	11	41	379.2119500905322	1134.6140208717966	3	379.2121887207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SVLILVGFGAC(Carbamidomethyl (C))_	ENSG00000205704|ENST00000381348|SMIM45;ENST00000381348.4_2_22:42353689-42353893:+|nuORF	25.125986553469783	0.7262400895305658	1				NaN	NaN	0	NaN	1183	2984	4166
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4178	17.485	NaN	13976	30	0	6947.3	0.214	+			49174	VVMRDPNTK	9	45	353.8583665501716	1058.5532702507148	3	353.8586120605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVMRDPNTK_	chr12:54282662-54282800|482|460.96|0.0|25.46|+|ENST00000677249|HNRNPA1,HNRNPA1;ENSG00000135486|ENST00000340913|HNRNPA1;ENSG00000139675|ENST00000357495|HNRNPA1L2;ENSG00000224578|ENST00000565308|HNRNPA1L3;ENST00000441603.1_1_11:5593122-5593311:-|nuORF;ENST00000452488.1_1_2:41383770-41384067:+|nuORF;ENST00000457695.2_1_X:100110922-100111255:-|nuORF;ENST00000575692.1_1_17:2210089-2210875:+|nuORF;nc|ENSG00000135486|P09651-2|HNRNPA1;nc|ENSG00000135486|P09651-3|HNRNPA1	63.53385203322761	0.18415635464017938	1				NaN	NaN	0	NaN	1189	2987	4177
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4179	17.489	NaN	2256.9	30	0	398.07	0.106	+			19993	KEIEGVTKT	9	55	502.78427306719834	1003.5539932011967	2	502.78448486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEIEGVTKT_	ENSG00000131558|ENST00000253861|EXOC4	126.24258497203832	0.01742065577488747	1				NaN	NaN	0	NaN	1190	2987	4177
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4180	17.49	NaN	1199.6	30	0	353.97	0.034	+			4052	ATDGTFSSK	9	40	457.2164918622385	912.418430791277	2	457.2165222167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATDGTFSSK_	ENSG00000083857|ENST00000441802|FAT1;FAT1|p.N3847Yfs*7|1|0.03|ENSG00000083857|chr4:186601370-186601371|-/TTATA|frameshift_variant;FAT1|p.P3228Lfs*42|1|0.27|ENSG00000083857|chr4:186611556-186611556|G/-|frameshift_variant;FAT1|p.P4313Lfs*36|1|0.34|ENSG00000083857|chr4:186596602-186596602|G/-|frameshift_variant	44.377184641726394	0.36891676396732553	1				NaN	NaN	0	NaN	1191	2987	4177
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4190	17.512	NaN	5114.3	30	0	1778.2	0.212			+	-1	SHHEAMRPNWG	11	56	669.2936827587688	1336.5728125843375	2	669.29541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_SHHEAM(Oxidation (M))RPNWG_	REV__ENST00000507229.5_1_1:1551767-1563881:+|nuORF;REV__nc|ENSG00000197530|Q96AX9-6|MIB2	40.05817265558897	0.5571470695993369	1				NaN	NaN	0	NaN	1198	2990	4189
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4191	17.516	NaN	6469.6	30	0	1364.7	0.106	+			28895	NQKIVNLKEK	10	56	405.246574453553	1212.717893960859	3	405.24700927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NQKIVNLKEK_	ENSG00000171557|ENST00000336098|FGG;nc|ENSG00000171557|P02679-2|FGG	61.691277971877994	0.35045824941635534	1				NaN	NaN	0	NaN	1199	2990	4189
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4192	17.518	NaN	825.4	30	0	91.772	0.106			+	28703	NNETVRQIA	9	33	522.7759361620402	NaN	0	522.7762451171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NNETVRQIA_	REV__ENSG00000112029|ENST00000229758|FBXO5;REV__FBXO5|p.D340Mfs*30|1|0.38|ENSG00000112029|chr6:152972347-152972347|T/-|frameshift_variant;REV__nc|ENSG00000112029|Q9UKT4-2|FBXO5	20.94693142431847	0.3660861156085067	1				NaN	NaN	0	NaN	1200	2990	4189
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4193	17.52	NaN	657.3	30	0	136.13	0.033	+			14643	GTGVTSLSK	9	32	425.2370839461355	848.459614959071	2	425.2369079589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTGVTSLSK_	ENSG00000175536|ENST00000310109|LIPT2	32.81241826257853	0.4965981579233955	1				NaN	NaN	0	NaN	1201	2990	4189
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4203	17.543	NaN	4394.7	30	0	561.83	0.214			+	43442	TGLPEYDYHGW	11	54	446.53207368234837	1336.5743916472452	3	446.53204345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TGLPEYDYHGW_	REV__ENSG00000148604|ENST00000652092|RGR;REV__ENST00000483771.5_1_10:86008492-86018392:+|nuORF;REV__ENST00000497161.1_1_10:86008738-86014907:+|nuORF;REV__nc|ENSG00000148604|P47804-2|RGR;REV__nc|ENSG00000148604|P47804-3|RGR	34.172542307311794	0.6313490974540716	1				NaN	NaN	0	NaN	1208	2993	4202
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4204	17.547	NaN	836.66	30	0	194.96	0.106			+	29648	PGLAGAAR	8	30	356.7085787688816	NaN	0	356.7086181640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PGLAGAAR_	REV__ENST00000270570.8_1_17:19437323-19449797:+|nuORF	42.47446043378293	1.7418937515398478	1				NaN	NaN	0	NaN	1209	2993	4202
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4205	17.549	NaN	1054.1	30	0	358	0.106	+			47248	VMRDPNTK	8	38	480.7499693618182	959.4853857904365	2	480.75	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VMRDPNTK_	chr12:54281896-54283827|481|161.31|0.0|23.94|+|ENST00000679273|HNRNPA1,HNRNPA1;chr12:54281908-54283827|478|50.47|0.0|22.27|+|ENST00000678448|HNRNPA1,HNRNPA1;chr12:54281941-54282052|473|46.5|0.0|22.15|+|ENST00000676842|HNRNPA1,HNRNPA1;chr12:54281945-54282090|465|21.34|0.0|21.03|+|ENST00000550994|HNRNPA1,HNRNPA1;chr12:54282662-54282800|482|460.96|0.0|25.46|+|ENST00000677249|HNRNPA1,HNRNPA1;ENSG00000135486|ENST00000340913|HNRNPA1;ENSG00000139675|ENST00000357495|HNRNPA1L2;ENSG00000224578|ENST00000565308|HNRNPA1L3;ENST00000391992.3_1_12:9181361-9181625:-|nuORF;ENST00000412087.2_1_X:100143133-100143544:-|nuORF;ENST00000441603.1_1_11:5593122-5593311:-|nuORF;ENST00000452488.1_1_2:41383770-41384067:+|nuORF;ENST00000457695.2_1_X:100110922-100111255:-|nuORF;ENST00000575692.1_1_17:2210089-2210875:+|nuORF;nc|ENSG00000135486|P09651-2|HNRNPA1;nc|ENSG00000135486|P09651-3|HNRNPA1	40.77816245573522	0.6514838689002179	1				NaN	NaN	0	NaN	1210	2993	4202
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4206	17.55	NaN	5980.8	30	0	2117.7	0.106			+	-1	VAYLETMPRW	10	38	427.88233961831935	1280.625189455158	3	427.8822021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_VAYLETM(Oxidation (M))PRW_	REV__ENSG00000044090|ENST00000265348|CUL7;REV__nc|ENSG00000044090|Q14999-2|CUL7	23.52269567125451	0.6877354443478558	1				NaN	NaN	0	NaN	1211	2993	4202
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4207	17.552	NaN	875.32	30	0	211.06	0.106			+	36938	SILHYAIM	8	38	474.2526120912839	NaN	0	474.2525939941406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SILHYAIM_	REV__tr|U7STB7|U7STB7_FUSNUDNApolymeraseIOS=FusobacteriumnucleatumCTI-5OX=1316586GN=polAPE=3SV=1	28.2542754592877	1.7418937515398478	1				NaN	NaN	0	NaN	1212	2993	4202
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4208	17.554	NaN	2659.1	30	0	648.51	0.033	+			12099	GACIGQKGA	9	46	431.21574255980676	860.4169321864135	2	431.2151794433594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_GAC(Carbamidomethyl (C))IGQKGA_	tr|U7T190|U7T190_FUSNUTranscriptiontermination/antiterminationproteinNusAOS=FusobacteriumnucleatumCTI-5OX=1316586GN=nusAPE=3SV=1	57.81127852772723	0.2318599694398087	1				NaN	NaN	0	NaN	1213	2993	4202
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4216	17.574	NaN	8179.6	30	0	1569	0.214	+			38262	SQNTDMVQK	9	72	525.7471195801312	1049.4796862270623	2	525.7479858398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SQNTDMVQK_	ENSG00000113282|ENST00000411809|CLINT1	101.45984612302182	0.0377122763612125	1				NaN	NaN	0	NaN	1218	2996	4215
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4217	17.577	NaN	3855	30	0	509.98	0.106	+			43089	TENPHGARL	9	56	497.75605542406817	993.4975579149364	2	497.7567138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TENPHGARL_	ENSG00000243725|ENST00000371281|TTC4	85.16082228582465	0.07850854922700509	1				NaN	NaN	0	NaN	1219	2996	4215
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4218	17.579	NaN	3377.4	30	0	370.9	0.106			+	13391	GLEAKHGL	8	49	412.73457195222295	823.4545909712459	2	412.73480224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GLEAKHGL_	REV__ATP8B2|p.K587Efs*10|1|0.31|ENSG00000143515|chr1:154343465-154343466|-/G|frameshift_variant;REV__ENSG00000143515|ENST00000368489|ATP8B2;REV__nc|ENSG00000143515|P98198-3|ATP8B2;REV__nc|ENSG00000143515|P98198|ATP8B2	57.81127852772723	0.5234495074909924	1				NaN	NaN	0	NaN	1220	2996	4215
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4219	17.581	NaN	3340.3	30	0	398.03	0.106	+			34321	RTNEVVAIKK	10	54	386.5710711964228	1156.6913841894684	3	386.5711975097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RTNEVVAIKK_	ENSG00000160551|ENST00000261716|TAOK1;nc|ENSG00000160551|Q7L7X3-3|TAOK1;TAOK1-VMP1|1|fusion	54.722347961057174	0.4138398245444204	1				NaN	NaN	0	NaN	1221	2996	4215
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4220	17.583	NaN	825.85	30	0	168.59	0.106			+	21289	KLRDGEAKIK	10	34	579.3528106064035	1156.691068279607	2	579.3534545898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KLRDGEAKIK_	REV__KIF4A|p.T250I|1|0.15|ENSG00000090889|chrX:70302369-70302369|C/T|missense_variant	47.95952297671804	0.47580206326914537	1				NaN	NaN	0	NaN	1222	2996	4215
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4221	17.585	NaN	1070.9	30	0	105.35	0.033	+			26480	LTLNNGKL	8	48	436.76347695877087	NaN	0	436.7635498046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LTLNNGKL_	ENSG00000177853|ENST00000316045|ZNF518A;nc|ENSG00000177853|Q6AHZ1-2|ZNF518A;ZNF518A|p.I1254Nfs*11|1|0.18|ENSG00000177853|chr10:96160075-96160076|-/A|frameshift_variant;ZNF518A|p.L1107Ffs*8|1|0.31|ENSG00000177853|chr10:96159635-96159636|-/T|frameshift_variant	73.97473282117947	1.7418937515398478	1				NaN	NaN	0	NaN	1223	2996	4215
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4234	17.612	NaN	28083	30	0	5009.6	0.215	+			3712	ATAASSSSLEK	11	85	526.2666765672136	1050.5188002012271	2	526.2672729492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATAASSSSLEK_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENST00000417985.1_1_X:46147855-46148119:-|nuORF;ENST00000418987.2_1_9:103493819-103494230:+|nuORF;ENST00000423183.1_1_3:12112396-12112453:+|nuORF;ENST00000450451.1_1_1:238090483-238090852:+|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2	117.7056744995986	0.02459125945945966	1				NaN	NaN	0	NaN	1233	2999	4233
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4235	17.616	NaN	6734.9	30	0	3154.7	0.106	+			14228	GSSSASIVK	9	49	418.2291279884918	834.4437030437837	2	418.229248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSSSASIVK_	DSG2|p.I845*|1|0.27|ENSG00000046604|chr18:31545914-31545914|A/-|frameshift_variant;ENSG00000046604|ENST00000261590|DSG2	75.04331003522576	0.118981335847003	1				NaN	NaN	0	NaN	1234	2999	4233
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4236	17.617	NaN	1699.1	30	0	359.05	0.106	+			40016	STMSTSCAR	9	43	472.2018688014104	942.3891846696208	2	472.2022399902344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STMSTSCAR_	ENST00000282388.3_2_2:43452860-43453537:-|nuORF	45.97224482568171	0.3502073465782774	1				NaN	NaN	0	NaN	1235	2999	4233
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4237	17.619	NaN	1126.2	30	0	275.89	0.106	+			24513	LGKGYSQA	8	31	412.2186191221732	822.4226853111464	2	412.218505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LGKGYSQA_	ENST00000524751.5_1_11:126139211-126143243:+|nuORF;ENST00000526525.1_1_11:126139211-126143019:+|nuORF	35.61828744233558	0.6843154725607303	1				NaN	NaN	0	NaN	1236	2999	4233
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4238	17.621	NaN	2732.1	30	0	605.4	0.106	+			22582	KTSTVFSSK	9	44	492.7716865215687	983.5288201099374	2	492.7713623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KTSTVFSSK_	nc|ENSG00000196275|Q86UP8-4|GTF2IRD2	81.52500206392136	0.09095445986635249	1				NaN	NaN	0	NaN	1237	2999	4233
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4239	17.623	NaN	550.98	30	0	71.027	0.035	+			36922	SIKEVDEAK	9	37	509.7743958674763	NaN	0	509.77423095703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SIKEVDEAK_	CAST|p.E474Kfs*10|1|0.39|ENSG00000153113|chr5:96754695-96754695|A/-|frameshift_variant;ENSG00000153113|ENST00000675179|CAST;ENST00000513666.5_1_5:96073558-96090478:+|nuORF;nc|ENSG00000153113|P20810-10|CAST;nc|ENSG00000153113|P20810-2|CAST;nc|ENSG00000153113|P20810-3|CAST;nc|ENSG00000153113|P20810-4|CAST;nc|ENSG00000153113|P20810-5|CAST;nc|ENSG00000153113|P20810-7|CAST;nc|ENSG00000153113|P20810-8|CAST;nc|ENSG00000153113|P20810-9|CAST;nc|ENSG00000153113|P20810|CAST	47.95952297671804	0.22075498469600283	1				NaN	NaN	0	NaN	1238	2999	4233
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4248	17.644	NaN	20036	30	0	10310	0.214	+			15777	GVTRVTIRK	9	56	343.8890062901848	NaN	0	343.8890380859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVTRVTIRK_	ENSG00000196531|ENST00000454682|NACA;ENST00000419462.1_1_8:102381113-102381542:+|nuORF;nc|ENSG00000196531|E9PAV3-2|NACA;nc|ENSG00000196531|Q13765|NACA;nc|ENSG00000228224|Q9BZK3|NACA4P	99.01295224348159	0.023427377858318825	1				NaN	NaN	0	NaN	1244	3002	4247
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4249	17.648	NaN	11087	30	0	2480	0.106	+			19418	KAPSAARSL	9	67	450.766482302157	899.518411671114	2	450.7667236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KAPSAARSL_	ENSG00000083937|ENST00000263780|CHMP2B;ENST00000466696.1_1_3:87302513-87302969:+|nuORF;nc|ENSG00000083937|Q9UQN3-2|CHMP2B	63.53385203322761	0.18415635464017938	1				NaN	NaN	0	NaN	1245	3002	4247
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4250	17.65	NaN	2659.4	30	0	1304.9	0.106			+	34134	RSTRASSCTL	10	45	541.2733068828152	1080.5320608324303	2	541.2743530273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RSTRASSCTL_	REV__HID1|p.L141Wfs*62|1|0.54|ENSG00000167861|chr17:74963048-74963048|G/-|frameshift_variant	41.42661286455405	0.5359995577334734	1				NaN	NaN	0	NaN	1246	3002	4247
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4251	17.652	NaN	903.63	30	0	288.63	0.106	+			45398	TVTTTLKN	8	34	439.2530212402344	NaN	0	439.2530212402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TVTTTLKN_	ENSG00000126214|ENST00000334553|KLC1;nc|ENSG00000126214|Q07866-10|KLC1;nc|ENSG00000126214|Q07866-2|KLC1;nc|ENSG00000126214|Q07866-3|KLC1;nc|ENSG00000126214|Q07866-4|KLC1;nc|ENSG00000126214|Q07866-5|KLC1;nc|ENSG00000126214|Q07866-6|KLC1;nc|ENSG00000126214|Q07866-7|KLC1;nc|ENSG00000126214|Q07866-8|KLC1;nc|ENSG00000126214|Q07866|KLC1	21.9598887501803	1.7418937515398478	1				NaN	NaN	0	NaN	1247	3002	4247
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4252	17.654	NaN	640.21	30	0	83.151	0.034			+	50320	WTGNVKCV	8	36	453.72955322265625	NaN	0	453.72955322265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_WTGNVKCV_	REV__ENSG00000172236|ENST00000338844|TPSAB1;REV__ENSG00000197253|ENST00000606293|TPSB2;REV__nc|ENSG00000172236|Q15661-2|TPSAB1	26.79610172149135	1.7418937515398478	1				NaN	NaN	0	NaN	1248	3002	4247
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4265	17.681	NaN	18634	30	0	7211.6	0.214				-1	MPYKEAKDR	9	52	385.1946003430408	1152.5619716293224	3	385.19500732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))PYKEAKDR_	CCDC168|p.G6141Lfs*25|1|0.03|ENSG00000175820|chr13:102732276-102732277|-/AGGAAAAATCACCAAACACTAG|frameshift_variant;CCDC168|p.K5937Nfs*10|1|0.37|ENSG00000175820|chr13:102732886-102732886|T/-|frameshift_variant;CCDC168|p.K6236Nfs*3|1|0.42|ENSG00000175820|chr13:102731989-102731989|T/-|frameshift_variant;CCDC168|p.L5048Ifs*6|1|0.12|ENSG00000175820|chr13:102735555-102735556|-/T|frameshift_variant;CCDC168|p.L5234*|1|0.12|ENSG00000175820|chr13:102735001-102735001|A/-|frameshift_variant;CCDC168|p.M5025Cfs*8|1|0.29|ENSG00000175820|chr13:102735624-102735624|T/-|frameshift_variant;ENSG00000175820|ENST00000322527|CCDC168	31.529811441608018	0.5085848003137583	1				NaN	NaN	0	NaN	1258	3005	4264
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4266	17.685	NaN	1812.6	30	0	442.87	0.106	+			31723	QNWEEFFENL	10	32	678.2993309548721	1354.584108976544	2	678.3005981445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QNWEEFFENL_	tr|U7SL44|U7SL44_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01976PE=4SV=1	17.468008924990375	0.7276870902328821	1				NaN	NaN	0	NaN	1259	3005	4264
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4267	17.686	NaN	1321.1	30	0	260.92	0.106			+	-1	LCGALTDSR	9	37	496.74362081140794	991.4726886896159	2	496.7430114746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LC(Carbamidomethyl (C))GALTDSR_	REV__ENST00000540651.5_1_1:228286285-228286639:+|nuORF	24.20275056022122	0.577060078256802	1				NaN	NaN	0	NaN	1260	3005	4264
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4268	17.688	NaN	1668.3	30	0	500.05	0.038	+			40190	STRFFDIQLG	10	35	395.2071533203125	NaN	0	395.2071533203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STRFFDIQLG_	ENSG00000086289|ENST00000199448|EPDR1;nc|ENSG00000086289|Q9UM22-3|EPDR1	28.081489160057373	0.40797012399963245	1				NaN	NaN	0	NaN	1261	3005	4264
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4279	17.714	NaN	13663	30	0	1836.5	0.215	+			15426	GTYRDANIK	9	60	519.2720543866428	1036.5295558400855	2	519.2728881835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTYRDANIK_	ENSG00000112531|ENST00000361752|QKI;nc|ENSG00000112531|Q96PU8-3|QKI;nc|ENSG00000112531|Q96PU8-5|QKI;nc|ENSG00000112531|Q96PU8-6|QKI;nc|ENSG00000112531|Q96PU8-8|QKI;nc|ENSG00000112531|Q96PU8-9|QKI	106.88024417677582	0.032181361622142884	1				NaN	NaN	0	NaN	1269	3008	4278
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4280	17.717	NaN	2475.4	30	0	712.35	0.106	+			22305	KTETPIVSK	9	55	501.79461402382424	1001.5746751144485	2	501.79498291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTETPIVSK_	ENSG00000124164|ENST00000475243|VAPB;ENST00000463370.5_1_20:57007450-57019288:+|nuORF;ENST00000476395.1_1_20:57015848-57019288:+|nuORF	83.6470233535746	0.08277643980271215	1				NaN	NaN	0	NaN	1270	3008	4278
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4281	17.719	NaN	3067.5	30	0	607.12	0.106	+			40300	STSSSSPLR	9	47	461.23503799823027	920.4555230632606	2	461.2355041503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STSSSSPLR_	ENST00000223023.4_1_7:123388889-123389093:-|nuORF	75.04331003522576	0.118981335847003	1				NaN	NaN	0	NaN	1271	3008	4278
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4282	17.721	NaN	3124.2	30	0	279.39	0.106	+			34195	RTDEAAFQK	9	71	533.2699246285451	1064.5252963238902	2	533.2706909179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RTDEAAFQK_	ENSG00000196154|ENST00000368716|S100A4	72.2432373244024	0.13108886737667413	1				NaN	NaN	0	NaN	1272	3008	4278
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4283	17.723	NaN	2804.1	30	0	444.59	0.106	+			18731	ITHAVVIKK	9	50	336.8899599165373	1007.6480503498119	3	336.89007568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ITHAVVIKK_	ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;ENST00000565932.5_1_16:28734455-28746831:+|nuORF;nc|ENSG00000184110|Q99613-2|EIF3C	58.22992032128504	0.22837015374068087	1				NaN	NaN	0	NaN	1273	3008	4278
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4284	17.724	NaN	182.36	30	0	28.008	0.038			+	29523	PEAADDSFKLR	11	14	624.8134155273438	NaN	0	624.8134155273438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PEAADDSFKLR_	REV__BICD2|p.G282R|1|0.18|ENSG00000185963|chr9:92720518-92720518|C/G|missense_variant	8.693696342081763	0.456735970842152	1				NaN	NaN	0	NaN	1274	3008	4278
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4285	17.725	NaN	2087.4	30	0	263.63	0.142	+			34680	RVSSQLIQ	8	62	465.7717491092005	929.5289452852011	2	465.7725524902344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RVSSQLIQ_	ENSG00000180787|ENST00000318833|ZFP3;ZFP3|p.R273I|1|0.35|ENSG00000180787|chr17:5092322-5092322|G/T|missense_variant	58.78195531508484	0.5138399468736706	1				NaN	NaN	0	NaN	1275	3008	4278
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4295	17.75	NaN	6217.1	30	0	1752.1	0.214	+			3116	ASGSTTFTK	9	63	450.22675732525363	898.4389617173073	2	450.2267150878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASGSTTFTK_	ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1670Tfs*23|1|0.29|ENSG00000174231|chr17:1659487-1659487|C/-|frameshift_variant	72.87924865735499	0.12833875048249987	1				NaN	NaN	0	NaN	1282	3011	4294
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4296	17.754	NaN	22872	30	0	5531.4	0.106	+			48898	VVDNGSGMCK	10	81	533.7359433081608	1065.4573336831215	2	533.737060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_VVDNGSGMC(Carbamidomethyl (C))K_	ACTBL2|p.R29Gfs*7|1|0.37|ENSG00000169067|chr5:57482623-57482623|G/-|frameshift_variant;ENSG00000075624|ENST00000646664|ACTB;ENSG00000169067|ENST00000423391|ACTBL2;ENST00000418351.1_1_15:44282253-44282364:-|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000477812.1_1_7:5569027-5569288:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF	120.27252224102466	0.026944837168485097	1				NaN	NaN	0	NaN	1283	3011	4294
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4297	17.756	NaN	17275	30	0	1959.8	0.106				-1	 	0	84	522.7929160117251	1043.57127909025	2	522.7937622070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	1284	3011	4294
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4298	17.758	NaN	1575.4	30	0	266.65	0.106	+			17995	IHYMLGKV	8	45	480.7710569388884	NaN	0	480.771240234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IHYMLGKV_	ENSG00000099991|ENST00000263119|CABIN1;ENST00000496016.1_1_22:24483558-24487884:+|nuORF;nc|ENSG00000099991|Q9Y6J0-2|CABIN1	37.028477286268924	1.7418937515398478	1				NaN	NaN	0	NaN	1285	3011	4294
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4299	17.759	NaN	2786.6	30	0	539.68	0.106	+			4292	ATGGWSSSK	9	53	440.7112646996871	879.4079764661742	2	440.7115173339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATGGWSSSK_	BAHD1|p.P431Lfs*16|1|0.42|ENSG00000140320|chr15:40459754-40459754|C/-|frameshift_variant;ENSG00000140320|ENST00000416165|BAHD1;nc|ENSG00000140320|Q8TBE0-2|BAHD1;nc|ENSG00000140320|Q8TBE0-3|BAHD1	77.31757898189308	0.1091473830098891	1				NaN	NaN	0	NaN	1286	3011	4294
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4300	17.761	NaN	817.87	30	0	103.54	0.035	+			44679	TTHSQPVTR	9	39	513.769775390625	NaN	0	513.769775390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TTHSQPVTR_	ENSG00000215182|ENST00000621226|MUC5AC;ENSG00000215182|ENST00000621226|MUC5AC;ENSG00000215182|ENST00000621226|MUC5AC;MUC5AC|p.R4729Efs*5|1|0.24|ENSG00000215182|chr11:1192325-1192325|C/-|frameshift_variant;MUC5AC|p.R4729Efs*5|1|0.24|ENSG00000215182|chr11:1192325-1192325|C/-|frameshift_variant;MUC5AC|p.R4729Efs*5|1|0.24|ENSG00000215182|chr11:1192325-1192325|C/-|frameshift_variant	18.262085536374414	0.37517301184500873	1				NaN	NaN	0	NaN	1287	3011	4294
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4301	17.762	NaN	2236	30	0	552.48	0.144	+			32750	RAQDLPLKK	9	36	356.8880190618002	1067.6422277856007	3	356.8887023925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RAQDLPLKK_	ENSG00000139641|ENST00000394048|ESYT1	26.69291269510374	0.5537881896960711	1				NaN	NaN	0	NaN	1288	3011	4294
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4312	17.789	NaN	2271.1	30	0	737.22	0.214	+			4274	ATGGMANVK	9	42	424.71789810062535	847.4212432680507	2	424.7181091308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATGGMANVK_	ENSG00000136936|ENST00000375128|XPA;XPA|p.A65T|1|0.24|ENSG00000136936|chr9:97693739-97693739|C/T|missense_variant	71.87747018426188	0.13267044672804276	1				NaN	NaN	0	NaN	1296	3014	4311
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4313	17.793	NaN	6966.1	30	0	3297.9	0.106	+			39278	STARLWDHKK	10	59	414.56286529614795	1240.6667664886438	3	414.8970031738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STARLWDHKK_	ENST00000529974.1_1_11:88068229-88070878:-|nuORF	35.17822180527639	0.5925517082438457	1				NaN	NaN	0	NaN	1297	3014	4311
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4314	17.794	NaN	435.75	30	0	76.581	0.035	+			31222	QGVFLARYG	9	28	505.7723083496094	NaN	0	505.7723083496094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QGVFLARYG_	CYP2D6|p.L372Wfs*3|1|0.39|ENSG00000100197|chr22:42127506-42127506|G/-|frameshift_variant;ENSG00000100197|ENST00000645361|CYP2D6	30.503639358989545	0.3235605894931338	1				NaN	NaN	0	NaN	1298	3014	4311
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4328	17.824	NaN	2568.4	30	0	378.65	0.214	+			8941	EEYKNAKR	8	61	519.2720543866428	1036.5295558400855	2	519.2741088867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EEYKNAKR_	RIC8B|p.P483R|1|0.5|ENSG00000111785|chr12:106860409-106860409|C/G|missense_variant	52.936696900407355	0.5717071646657654	1				NaN	NaN	0	NaN	1309	3017	4327
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4329	17.828	NaN	2327.1	30	0	594.92	0.106			+	-1	KCIECKFCTSH	11	26	706.8114421765707	NaN	0	706.8118896484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_KC(Carbamidomethyl (C))IECKFC(Carbamidomethyl (C))TSH_	REV__ENSG00000136155|ENST00000349847|SCEL;REV__nc|ENSG00000136155|O95171-2|SCEL;REV__nc|ENSG00000136155|O95171-3|SCEL	18.262085536374414	0.456735970842152	1				NaN	NaN	0	NaN	1310	3017	4327
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4330	17.83	NaN	5311.5	30	0	2378.2	0.106	+			14242	GSSSVAAMK	9	50	419.21011891777624	836.4056849023525	2	419.2101135253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GSSSVAAMK_	ENSG00000174021|ENST00000370645|GNG5;GNG5-NMI|1|fusion	69.6276240434122	0.14239879520340665	1				NaN	NaN	0	NaN	1311	3017	4327
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4331	17.831	NaN	1235.3	30	0	298.96	0.106			+	22300	KTEKTEKK	8	45	496.29235557384936	NaN	0	496.2922668457031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTEKTEKK_	REV__ENSG00000124380|ENST00000244227|SNRNP27	62.107414245175825	1.7418937515398478	1				NaN	NaN	0	NaN	1312	3017	4327
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4332	17.833	NaN	1520.4	30	0	476.82	0.106	+			7514	DGPRPWLR	8	29	332.8500061035156	NaN	0	332.8500061035156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DGPRPWLR_	ENSG00000196169|ENST00000389916|KIF19	30.503639358989545	1.7418937515398478	1				NaN	NaN	0	NaN	1313	3017	4327
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4333	17.835	NaN	3027.1	30	0	594.92	0.106	+			30388	PVPVGDTS	8	47	386.19750325659066	770.3804535799813	2	386.1978454589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PVPVGDTS_	ENSG00000081148|ENST00000193391|IMPG2;IMPG2|p.F1232Lfs*2|1|0.3|ENSG00000081148|chr3:101228814-101228814|A/-|frameshift_variant	33.51558372728122	0.7005509609380386	1				NaN	NaN	0	NaN	1314	3017	4327
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4334	17.837	NaN	4888.6	30	0	867.11	0.037	+			40500	STYKEAFRK	9	43	377.20527264535633	NaN	0	377.20526123046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STYKEAFRK_	ENSG00000163344|ENST00000368467|PMVK	49.536043120802724	0.20989033510253738	1				NaN	NaN	0	NaN	1315	3017	4327
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4345	17.862	NaN	7315.1	30	0	1129.3	0.214			+	-1	LEECYVVCVQG	11	64	452.5360201966644	NaN	0	452.5359802246094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_LEEC(Carbamidomethyl (C))YVVC(Carbamidomethyl (C))VQG_	REV__ENSG00000173809|ENST00000639142|TDRD12;REV__nc|ENSG00000173809|Q587J7-2|TDRD12;REV__nc|ENSG00000173809|Q587J7|TDRD12	42.33807565288922	0.3703495330385095	1				NaN	NaN	0	NaN	1323	3020	4344
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4346	17.865	NaN	5610.2	30	0	1818.9	0.106	+			4822	ATNYITRNK	9	41	360.8646913553269	1079.5722446661807	3	360.86474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATNYITRNK_	ENSG00000100029|ENST00000354694|PES1;ENST00000466614.1_1_22:30983271-30987820:-|nuORF;nc|ENSG00000100029|O00541-2|PES1	27.882242232435846	0.5426732730940306	1				NaN	NaN	0	NaN	1324	3020	4344
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4347	17.867	NaN	2824.5	30	0	695.09	0.106	+			15111	GTQSDKVTLK	10	62	538.8009588329982	1075.5873647327962	2	538.8016357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTQSDKVTLK_	ENSG00000115677|ENST00000310931|HDLBP;ENST00000479169.5_1_2:242177863-242181895:-|nuORF;ENST00000483086.1_1_2:242174984-242179130:-|nuORF;ENST00000487169.5_1_2:242174673-242189369:-|nuORF;nc|ENSG00000115677|Q00341-2|HDLBP	82.83050618871818	0.17249597090446123	1				NaN	NaN	0	NaN	1325	3020	4344
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4348	17.869	NaN	1209.6	30	0	323.36	0.106	+			36905	SIHTAWLIL	9	46	527.3071899414062	NaN	0	527.3071899414062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SIHTAWLIL_	ENSG00000172331|ENST00000344924|BPGM	37.15910966729921	0.2899585034171616	1				NaN	NaN	0	NaN	1326	3020	4344
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4349	17.871	NaN	522.44	30	0	93.722	0.106				-1	GCVSKGWIPE	10	33	566.7782592773438	NaN	0	566.7782592773438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_GC(Carbamidomethyl (C))VSKGWIPE_	ENST00000475868.1_1_2:42282003-42282583:+|nuORF	19.1035232394073	0.4201028297492154	1				NaN	NaN	0	NaN	1327	3020	4344
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4350	17.873	NaN	2586.4	30	0	562.25	0.038				-1	KSRNCIVDGR	10	43	402.2118606101744	1203.6137524307233	3	402.2119445800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_KSRNC(Carbamidomethyl (C))IVDGR_	ENSG00000132518|ENST00000254854|GUCY2D	31.634271133179894	0.6214930414500597	1				NaN	NaN	0	NaN	1328	3020	4344
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4351	17.873	NaN	2586	30	0	273.48	0.138			+	35239	SALGGKRY	8	53	426.24051128551645	850.4664696378329	2	426.240478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SALGGKRY_	REV__ENSG00000136059|ENST00000383759|VILL;REV__ENST00000484717.5_1_3:38035793-38043423:+|nuORF;REV__nc|ENSG00000136059|O15195-2|VILL;REV__VILL|p.L273Tfs*30|1|0.46|ENSG00000136059|chr3:37998133-37998134|-/C|frameshift_variant;REV__VILL|p.P323Rfs*9|1|0.27|ENSG00000136059|chr3:37998935-37998935|C/-|frameshift_variant	37.15910966729921	0.6739408393984688	1				NaN	NaN	0	NaN	1329	3020	4344
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4362	17.9	NaN	9041.3	30	0	1383.8	0.214	+			15885	GYSSKGLSQ	9	60	463.7325840019803	925.4506150707606	2	463.73284912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GYSSKGLSQ_	SLC44A4|p.I435S|1|0.34|ENSG00000204385|chr6:31866056-31866056|A/C|missense_variant	87.69643885390035	0.07135982304947239	1				NaN	NaN	0	NaN	1337	3023	4361
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4363	17.904	NaN	6959.8	30	0	1172.2	0.106	+			32752	RAQDLPLKK	9	59	534.8301276515348	1067.6457023698695	2	534.8311767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RAQDLPLKK_	ENSG00000139641|ENST00000394048|ESYT1	72.87924865735499	0.12833875048249987	1				NaN	NaN	0	NaN	1338	3023	4361
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4364	17.906	NaN	6296	30	0	1905	0.106	+			49189	VVMRDPQTK	9	58	537.2917924578845	1072.569031982569	2	537.2933959960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVMRDPQTK_	ENSG00000170144|ENST00000392524|HNRNPA3;ENST00000437410.2_1_1:54441353-54441674:-|nuORF;ENST00000472163.1_1_3:75263799-75264780:+|nuORF;HNRNPA3|p.K200Rfs*147|1|0.13|ENSG00000170144|chr2:177216544-177216544|A/-|frameshift_variant;HNRNPA3|p.Y267Lfs*2|1|0.62|ENSG00000170144|chr2:177216918-177216919|-/T|frameshift_variant;nc|ENSG00000170144|P51991-2|HNRNPA3	75.65223720490533	0.11634833104049533	1				NaN	NaN	0	NaN	1339	3023	4361
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4365	17.908	NaN	3245.8	30	0	726.33	0.106	+			3890	ATAQFKINKK	10	39	383.5645742885156	1147.6718934657467	3	383.56463623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATAQFKINKK_	ENSG00000143228|ENST00000271452|NUF2;NUF2|p.I401Nfs*2|1|0.3|ENSG00000143228|chr1:163349015-163349016|-/A|frameshift_variant	45.02220120713402	0.5028680121232791	1				NaN	NaN	0	NaN	1340	3023	4361
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4366	17.91	NaN	1527.2	30	0	443.03	0.106			+	-1	LAQLYMWL	8	29	351.8527227545925	1052.5363388639776	3	351.85296630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_LAQLYM(Oxidation (M))WL_	REV__ENSG00000147874|ENST00000380502|HAUS6;REV__HAUS6|p.N492Mfs*50|1|0.4|ENSG00000147874|chr9:19063162-19063162|T/-|frameshift_variant;REV__HAUS6|p.S530Vfs*12|1|0.3|ENSG00000147874|chr9:19063049-19063049|T/-|frameshift_variant;REV__nc|ENSG00000147874|Q7Z4H7-2|HAUS6;REV__nc|ENSG00000147874|Q7Z4H7-3|HAUS6	33.51558372728122	0.7005509609380386	1				NaN	NaN	0	NaN	1341	3023	4361
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4367	17.911	NaN	1668.7	30	0	233.05	0.04			+	-1	QVALYRAFCR	10	43	442.5629806281859	1324.6671124847578	3	442.56341552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))QVALYRAFC(Carbamidomethyl (C))R_	REV__ENSG00000131697|ENST00000378156|NPHP4;REV__nc|ENSG00000131697|O75161-2|NPHP4;REV__NPHP4|p.R735Q|1|0.21|ENSG00000131697|chr1:5890968-5890968|C/T|missense_variant	28.081489160057373	0.6505064946289502	1				NaN	NaN	0	NaN	1342	3023	4361
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4368	17.912	NaN	1949.4	30	0	1024.5	0.144			+	50281	WRRGLGAPRQ	10	32	399.5628334334642	1195.6666709005926	3	399.8975524902344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_WRRGLGAPRQ_	REV__ENST00000496559.6_1_3:66430689-66456253:-|nuORF	21.68575002086885	0.7027366847906487	1				NaN	NaN	0	NaN	1343	3023	4361
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4380	17.939	NaN	346990	30	0	134920	0.142	+			4067	ATDKSFVEK	9	100	512.7688929907196	1023.5232330482391	2	512.7694702148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATDKSFVEK_	ENSG00000100345|ENST00000216181|MYH9;ENSG00000105357|ENST00000642316|MYH14;ENSG00000133392|ENST00000300036|MYH11;MYH14|p.L1950Sfs*14|1|0.34|ENSG00000105357|chr19:50309646-50309646|C/-|frameshift_variant;MYH14|p.M997*|1|0.19|ENSG00000105357|chr19:50271483-50271483|A/-|frameshift_variant;MYH14|p.R929Gfs*44|1|0.38|ENSG00000105357|chr19:50268237-50268237|G/-|frameshift_variant;MYH9|p.I784*|1|0.07|ENSG00000100345|chr22:36304036-36304036|G/-|frameshift_variant;nc|ENSG00000100345|P35579-2|MYH9;nc|ENSG00000105357|Q7Z406-4|MYH14;nc|ENSG00000105357|Q7Z406-5|MYH14;nc|ENSG00000105357|Q7Z406-6|MYH14;nc|ENSG00000105357|Q7Z406|MYH14;nc|ENSG00000133392|P35749-2|MYH11;nc|ENSG00000133392|P35749-3|MYH11;nc|ENSG00000133392|P35749-4|MYH11	195.57289506066198	5.204600901213804E-05	1				NaN	NaN	0	NaN	1352	3026	4379
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4381	17.942	NaN	27957	30	0	5128.2	0.106	+			32751	RAQDLPLKK	9	67	356.8880190618002	1067.6422277856007	3	357.2217102050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RAQDLPLKK_	ENSG00000139641|ENST00000394048|ESYT1	51.19269402634007	0.2889735674168909	1				NaN	NaN	0	NaN	1353	3026	4379
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4382	17.944	NaN	929.55	30	0	158.57	0.106			+	25986	LSKESLSH	8	47	450.7426631595438	899.4707733858876	2	450.27459716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSKESLSH_	REV__ENSG00000132972|ENST00000255324|RNF17;REV__nc|ENSG00000132972|Q9BXT8-4|RNF17;REV__nc|ENSG00000132972|Q9BXT8-5|RNF17;REV__RNF17|p.C1288Vfs*21|1|0.1|ENSG00000132972|chr13:24861352-24861352|T/-|frameshift_variant	60.97194046774394	0.49215940876911696	1				NaN	NaN	0	NaN	1354	3026	4379
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4383	17.946	NaN	7236.1	30	0	4425.3	0.106	+			30468	QAEEKAHAF	9	61	515.7509230664633	1029.4872931997265	2	515.7518310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QAEEKAHAF_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	60.11826168202944	0.21262886028301267	1				NaN	NaN	0	NaN	1355	3026	4379
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4384	17.948	NaN	5016.9	30	0	3732.4	0.106			+	47924	VSLSRVALKN	10	31	362.8924054646155	1085.6553869940465	3	362.8927001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSLSRVALKN_	REV__PTPN13|p.P924S|1|0.32|ENSG00000163629|chr4:86750589-86750589|C/T|missense_variant	14.864876125193954	0.7409144161711139	1				NaN	NaN	0	NaN	1356	3026	4379
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4385	17.95	NaN	1034.1	30	0	50.571	0.106	+			34904	SAAEASRAM	9	37	447.2110133441273	NaN	0	447.2108154296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SAAEASRAM_	ENSG00000101940|ENST00000376729|WDR13;nc|ENSG00000101940|Q9H1Z4-2|WDR13	61.691277971877994	0.14210560126578747	1				NaN	NaN	0	NaN	1357	3026	4379
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4386	17.952	NaN	578.02	30	0	166.58	0.035	+			26524	LTQHVRIH	8	23	335.19769287109375	NaN	0	335.19769287109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LTQHVRIH_	ENSG00000170100|ENST00000433976|ZNF778;ENSG00000187801|ENST00000361584|ZFP69B;nc|ENSG00000170100|Q96MU6-2|ZNF778;nc|ENSG00000170100|Q96MU6|ZNF778;nc|ENSG00000187801|Q9UJL9-2|ZFP69B;ZNF778|p.K615Nfs*80|1|0.09|ENSG00000170100|chr16:89228216-89228217|-/TATGAATGTGCTTATTC|frameshift_variant	20.481830146152948	1.741893751539848	1				NaN	NaN	0	NaN	1358	3026	4379
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4400	17.981	NaN	8836	30	0	2597.2	0.214	+			35785	SEAGSHTL	8	55	401.1902867671658	800.3660206011316	2	401.1905517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEAGSHTL_	ENSG00000204592|ENST00000376630|HLA-E;ENSG00000204642|ENST00000259951|HLA-F;ENSG00000234745|ENST00000412585|HLA-B;ENST00000474381.1_1_6:31323854-31324663:-|nuORF;HLA-B|p.G124Wfs*15|1|0.18|ENSG00000234745|chr6:31356416-31356417|-/A|frameshift_variant;HLA-B|p.H215Tfs*11|1|0.35|ENSG00000234745|chr6:31355569-31355569|G/-|frameshift_variant;HLA-B|p.P209Qfs*5|6|0.16|ENSG00000234745|chr6:31355586-31355586|G/-|frameshift_variant;HLA-B|p.V306Afs*13|1|0.49|ENSG00000234745|chr6:31355202-31355202|A/-|frameshift_variant;HLA-B|p.V312Cfs*22|1|0.28|ENSG00000234745|chr6:31355185-31355186|-/A|frameshift_variant;nc|ENSG00000204642|P30511-2|HLA-F;nc|ENSG00000204642|P30511|HLA-F	102.7733458925114	0.2491487235419157	1				NaN	NaN	0	NaN	1369	3029	4399
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4401	17.985	NaN	6319.8	30	0	1957.7	0.106	+			35601	SCCPVGCAK	9	49	491.2006267249333	980.3867005166666	2	491.201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_SCC(Carbamidomethyl (C))PVGC(Carbamidomethyl (C))AK_	CON__P67983;ENSG00000125144|ENST00000379811|MT1G;ENSG00000125148|ENST00000245185|MT2A;ENSG00000169688|ENST00000334346|MT1B;ENSG00000187193|ENST00000394485|MT1X;ENSG00000205364|ENST00000379818|MT1M;ENST00000330439.6_1_16:56660742-56660880:+|nuORF;ENST00000562017.1_1_16:56643131-56643263:+|nuORF;ENST00000563985.1_1_16:56642884-56643263:+|nuORF;ENST00000567300.1_1_16:56642646-56643263:+|nuORF;nc|ENSG00000125144|P13640-2|MT1G;nc|ENSG00000169715|P04732|MT1E	104.74654710444128	0.034358562718640136	1				NaN	NaN	0	NaN	1370	3029	4399
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4402	17.987	NaN	2952.2	30	0	362.5	0.106			+	31952	QQRLVGGL	8	64	435.76132036244974	869.5080877916995	2	435.7615051269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QQRLVGGL_	REV__ENSG00000003096|ENST00000540167|KLHL13;REV__ENSG00000198642|ENST00000359039|KLHL9;REV__KLHL13|p.Y595Ifs*9|1|0.07|ENSG00000003096|chrX:117899094-117899094|C/-|frameshift_variant;REV__nc|ENSG00000003096|Q9P2N7-2|KLHL13;REV__nc|ENSG00000003096|Q9P2N7-4|KLHL13;REV__nc|ENSG00000003096|Q9P2N7-5|KLHL13;REV__nc|ENSG00000003096|Q9P2N7|KLHL13	37.028477286268924	0.6747514403204248	1				NaN	NaN	0	NaN	1371	3029	4399
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4403	17.989	NaN	1112.3	30	0	212.71	0.106			+	-1	SVPPCWLLF	9	37	373.5289001464844	NaN	0	373.5289001464844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_SVPPC(Carbamidomethyl (C))WLLF_	REV__ENST00000432460.1_3_2:219523523-219523947:-|nuORF;REV__ENST00000449707.5_1_2:219523523-219524103:-|nuORF	27.882242232435846	0.3367954786602879	1				NaN	NaN	0	NaN	1372	3029	4399
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4404	17.99	NaN	1556.4	30	0	305.38	0.106			+	25852	LSESIVGRPV	10	38	352.87316062782094	NaN	0	352.87322998046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSESIVGRPV_	REV__ENST00000589123.5_2_19:3465565-3466177:+|nuORF	32.81241826257853	0.3924360933802784	1				NaN	NaN	0	NaN	1373	3029	4399
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4405	17.992	NaN	626.46	30	0	155.15	0.034	+			45784	VAGGSVAVLCP	11	39	486.7648620605469	NaN	0	486.7648620605469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VAGGSVAVLCP_	ENSG00000162896|ENST00000356495|PIGR;PIGR|p.W404Vfs*3|1|0.53|ENSG00000162896|chr1:206935654-206935655|-/C|frameshift_variant	25.125986553469783	0.45344013546260314	1				NaN	NaN	0	NaN	1374	3029	4399
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4406	17.993	NaN	776.22	30	0	138.17	0.14				-1	 	0	45	522.7929160117251	1043.57127909025	2	522.8134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	1375	3029	4399
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4418	18.02	NaN	16552	30	0	5782	0.214	+			49190	VVMRDPQTK	9	49	358.5302675955637	1072.5689733868912	3	358.5304260253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVMRDPQTK_	ENSG00000170144|ENST00000392524|HNRNPA3;ENST00000437410.2_1_1:54441353-54441674:-|nuORF;ENST00000472163.1_1_3:75263799-75264780:+|nuORF;HNRNPA3|p.K200Rfs*147|1|0.13|ENSG00000170144|chr2:177216544-177216544|A/-|frameshift_variant;HNRNPA3|p.Y267Lfs*2|1|0.62|ENSG00000170144|chr2:177216918-177216919|-/T|frameshift_variant;nc|ENSG00000170144|P51991-2|HNRNPA3	33.921630207806714	0.48623198279849766	1				NaN	NaN	0	NaN	1384	3032	4417
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4419	18.024	NaN	2112.4	30	0	387.91	0.106	+			48762	VTVSGGTPK	9	45	423.2397405680814	844.4649282029628	2	423.23968505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTVSGGTPK_	ENSG00000137804|ENST00000559596|NUSAP1;ENST00000558123.5_1_15:41625112-41672381:+|nuORF;nc|ENSG00000137804|Q9BXS6-2|NUSAP1;nc|ENSG00000137804|Q9BXS6-3|NUSAP1;nc|ENSG00000137804|Q9BXS6-4|NUSAP1;nc|ENSG00000137804|Q9BXS6-5|NUSAP1;nc|ENSG00000137804|Q9BXS6-6|NUSAP1;nc|ENSG00000137804|Q9BXS6-7|NUSAP1	47.95952297671804	0.32689736945648856	1				NaN	NaN	0	NaN	1385	3032	4417
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4420	18.026	NaN	10007	30	0	2325.2	0.106			+	46458	VESVVRTRTP	10	62	572.3272101879066	1142.6398674426132	2	572.3280639648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VESVVRTRTP_	REV__nc|ENSG00000293458|O60774|FMO6P	58.2462437865262	0.38179041844353556	1				NaN	NaN	0	NaN	1386	3032	4417
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4421	18.027	NaN	3095.5	30	0	281.15	0.106			+	44894	TTWTLKKQK	9	46	378.56011430716273	NaN	0	378.2251892089844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TTWTLKKQK_	REV__ENSG00000129873|ENST00000382867|CDY2B;REV__ENSG00000172288|ENST00000306609|CDY1;REV__ENSG00000172352|ENST00000382407|CDY1B;REV__ENSG00000182415|ENST00000250838|CDY2A	62.107414245175825	0.1403307765918332	1				NaN	NaN	0	NaN	1387	3032	4417
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4422	18.029	NaN	4192.4	30	0	2547.2	0.106	+			49093	VVLENAAKK	9	34	324.53422337894403	NaN	0	324.5341491699219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVLENAAKK_	ENSG00000171824|ENST00000376936|EXOSC10;ENST00000474216.5_1_1:11126777-11137033:-|nuORF;nc|ENSG00000171824|Q01780-2|EXOSC10	24.20275056022122	0.35506675290109213	1				NaN	NaN	0	NaN	1388	3032	4417
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4423	18.031	NaN	1470.3	30	0	314.66	0.106	+			37109	SISSPQPGK	9	51	450.7426631595438	899.4707733858876	2	450.74237060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SISSPQPGK_	ENSG00000136279|ENST00000448521|DBNL;nc|ENSG00000136279|Q9UJU6-2|DBNL;nc|ENSG00000136279|Q9UJU6-3|DBNL;nc|ENSG00000136279|Q9UJU6-4|DBNL;nc|ENSG00000136279|Q9UJU6-5|DBNL;nc|ENSG00000136279|Q9UJU6-6|DBNL	37.81151784470057	0.4459294069877048	1				NaN	NaN	0	NaN	1389	3032	4417
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4424	18.033	NaN	2620.1	30	0	1115.4	0.036	+			13564	GLSVGPGP	8	38	342.1893029495409	NaN	0	342.1892395019531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GLSVGPGP_	ENST00000375534.7_2_1:17301125-17301296:-|nuORF	24.504012794735996	1.7418937515398478	1				NaN	NaN	0	NaN	1390	3032	4417
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4436	18.058	NaN	3063.6	30	0	276.83	0.214	+			31558	QLNLLKAKQ	9	63	528.3320881268262	1054.6496233204523	2	528.3330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QLNLLKAKQ_	BIRC6|p.I2261Yfs*13|1|0.3|ENSG00000115760|chr2:32476268-32476268|A/-|frameshift_variant;BIRC6|p.K3585Sfs*8|1|0.32|ENSG00000115760|chr2:32515171-32515171|A/-|frameshift_variant;BIRC6|p.S2648Ffs*25|1|0.08|ENSG00000115760|chr2:32487769-32487770|-/T|frameshift_variant;BIRC6|p.S3504Mfs*5|1|0.15|ENSG00000115760|chr2:32513095-32513098|TAGT/-|frameshift_variant;ENSG00000115760|ENST00000421745|BIRC6	37.81151784470057	0.4459294069877048	1				NaN	NaN	0	NaN	1399	3035	4435
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4437	18.062	NaN	4328.3	30	0	678.04	0.106	+			4765	ATNDSVVADK	10	60	510.25353335556264	1018.4925137779253	2	510.254150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATNDSVVADK_	ENSG00000205220|ENST00000358514|PSMB10;ENST00000575556.1_1_16:67970119-67970555:-|nuORF	105.35861542232443	0.061783207666434706	1				NaN	NaN	0	NaN	1400	3035	4435
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4438	18.064	NaN	1488.1	30	0	216.38	0.034	+			15130	GTSDGRILK	9	49	473.76921895875864	945.5238849843173	2	473.76934814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTSDGRILK_	ENSG00000196576|ENST00000359337|PLXNB2;PLXNB2|p.G872Vfs*42|1|0.08|ENSG00000196576|chr22:50283401-50283401|C/-|frameshift_variant;PLXNB2|p.L1362Rfs*32|1|0.1|ENSG00000196576|chr22:50280578-50280579|CA/-|frameshift_variant;PLXNB2|p.V873Cfs*66|1|0.2|ENSG00000196576|chr22:50283400-50283401|-/C|frameshift_variant;PLXNB2|p.V928Cfs*3|1|0.71|ENSG00000196576|chr22:50283084-50283084|C/-|frameshift_variant	67.49366992349736	0.1516260258713357	1				NaN	NaN	0	NaN	1401	3035	4435
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4450	18.089	NaN	4880.4	30	0	611.51	0.214			+	21529	KNSKSPKNK	9	74	515.8036506303209	1029.5927483274418	2	515.8043212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KNSKSPKNK_	REV__ENSG00000164190|ENST00000282516|NIPBL;REV__ENST00000504430.5_1_5:36961623-36995905:+|nuORF;REV__nc|ENSG00000164190|Q6KC79-2|NIPBL;REV__nc|ENSG00000164190|Q6KC79-3|NIPBL;REV__NIPBL|p.F1423Lfs*15|1|0.43|ENSG00000164190|chr5:37008032-37008032|T/-|frameshift_variant;REV__NIPBL|p.I2776Lfs*3|1|0.17|ENSG00000164190|chr5:37064797-37064797|A/-|frameshift_variant;REV__NIPBL|p.L2220Ffs*3|1|0.21|ENSG00000164190|chr5:37048567-37048568|-/T|frameshift_variant	95.81516180277367	0.04847050768394289	1				NaN	NaN	0	NaN	1410	3038	4449
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4451	18.093	NaN	1921.2	30	0	492.71	0.106	+			22042	KSIQSGPLK	9	54	479.28948108645693	956.5644092397139	2	479.28936767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KSIQSGPLK_	ENSG00000132305|ENST00000410111|IMMT;ENST00000474969.5_1_2:86385703-86422514:-|nuORF;ENST00000486633.1_1_2:86400704-86422514:-|nuORF;nc|ENSG00000132305|Q16891-2|IMMT;nc|ENSG00000132305|Q16891-3|IMMT;nc|ENSG00000132305|Q16891-4|IMMT	58.22992032128504	0.22837015374068087	1				NaN	NaN	0	NaN	1411	3038	4449
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4452	18.095	NaN	1283.7	30	0	198.79	0.106			+	19650	KDLKKLEEI	9	44	558.3368173932524	1114.6590818533048	2	558.333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KDLKKLEEI_	REV__tr|U7SSL4|U7SSL4_FUSNUProtein-argininerhamnosyltransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01306PE=3SV=1	42.86426827375447	0.38666266728046506	1				NaN	NaN	0	NaN	1412	3038	4449
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4453	18.097	NaN	6425	30	0	619.69	0.106	+			46819	VIDAKKLLSE	10	66	372.5606196775409	1114.6600296328227	3	372.5596008300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VIDAKKLLSE_	DMXL1|p.F1668Lfs*15|1|0.41|ENSG00000172869|chr5:119166644-119166644|T/-|frameshift_variant;DMXL1|p.L1702Sfs*11|1|0.37|ENSG00000172869|chr5:119166742-119166743|-/T|frameshift_variant;DMXL1|p.N1661Tfs*4|1|0.37|ENSG00000172869|chr5:119166621-119166621|A/-|frameshift_variant;DMXL1|p.N3021Mfs*3|1|0.28|ENSG00000172869|chr5:119247193-119247193|A/-|frameshift_variant;DMXL1|p.S1844Vfs*9|1|0.1|ENSG00000172869|chr5:119170317-119170317|A/-|frameshift_variant;ENSG00000172869|ENST00000539542|DMXL1;ENST00000512281.1_1_5:118470015-118483170:+|nuORF;nc|ENSG00000172869|Q9Y485|DMXL1	32.75053402867276	0.6123771875927935	1				NaN	NaN	0	NaN	1413	3038	4449
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4454	18.098	NaN	1806.8	30	0	195.91	0.106			+	10036	ESANASHI	8	52	414.6957734817003	NaN	0	414.6955871582031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ESANASHI_	REV__ENSG00000104067|ENST00000614355|TJP1;REV__nc|ENSG00000104067|Q07157-2|TJP1;REV__nc|ENSG00000104067|Q07157|TJP1	40.5726180659479	1.7418937515398478	1				NaN	NaN	0	NaN	1414	3038	4449
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4455	18.1	NaN	1325.2	30	0	340.66	0.106			+	-1	RMVASAAPG	9	46	438.22362848759764	874.4327040419953	2	438.7253112792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_RM(Oxidation (M))VASAAPG_	REV__ENST00000533632.5_1_11:118889218-118889467:+|nuORF	27.882242232435846	0.5426732730940306	1				NaN	NaN	0	NaN	1415	3038	4449
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4456	18.102	NaN	426.62	30	0	107.47	0.033	+			25864	LSFIAVGM	8	28	419.23148472233686	NaN	0	419.2315979003906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSFIAVGM_	nc|ENSG00000168275|Q5JTJ3|COA6	28.2542754592877	1.7418937515398478	1				NaN	NaN	0	NaN	1416	3038	4449
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4466	18.125	NaN	1788	30	0	437.08	0.214			+	-1	EACLKPSLS	9	39	502.7591590940981	1003.5037652549962	2	502.75970458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_EAC(Carbamidomethyl (C))LKPSLS_	REV__ENSG00000135111|ENST00000349155|TBX3;REV__nc|ENSG00000135111|O15119-3|TBX3;REV__nc|ENSG00000135111|O15119|TBX3;REV__TBX3|p.K714Rfs*15|1|0.12|ENSG00000135111|chr12:114671931-114671932|TT/-|frameshift_variant	30.503639358989545	0.5181749237905803	1				NaN	NaN	0	NaN	1423	3041	4465
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4467	18.129	NaN	29121	30	0	7205.2	0.037	+			36821	SIEPGGIDITL	11	78	372.20462863806233	1113.592056514387	3	372.2049255371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SIEPGGIDITL_	ENSG00000111912|ENST00000392477|NCOA7;nc|ENSG00000111912|Q8NI08-2|NCOA7;nc|ENSG00000111912|Q8NI08-7|NCOA7	32.81241826257853	0.645615689454792	1				NaN	NaN	0	NaN	1424	3041	4465
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4477	18.152	NaN	809.75	30	0	132.41	0.214	+			50802	YEQKAAKL	8	40	475.7685546875	NaN	0	475.7685546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YEQKAAKL_	ENSG00000164104|ENST00000296503|HMGB2;ENST00000511316.1_1_4:174253953-174254163:-|nuORF	44.116797842482775	1.7418937515398478	1				NaN	NaN	0	NaN	1431	3044	4476
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4478	18.156	NaN	1229.7	30	0	178.43	0.035	+			41393	SVMNTSNPK	9	40	489.2391368613275	976.463720789455	2	489.2382507324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVMNTSNPK_	ATP9B|p.N368Ifs*13|1|0.37|ENSG00000166377|chr18:79214029-79214029|A/-|frameshift_variant;ATP9B|p.N368Kfs*2|1|0.4|ENSG00000166377|chr18:79214028-79214029|-/A|frameshift_variant;ENSG00000166377|ENST00000426216|ATP9B;ENST00000585674.1_1_18:76966984-77037243:+|nuORF;nc|ENSG00000166377|O43861-2|ATP9B	82.7504851949679	0.08565546331141553	1				NaN	NaN	0	NaN	1432	3044	4476
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4486	18.176	NaN	2763.7	30	0	446.3	0.214	+			24161	LELSGSRLEQ	10	55	566.3041288407869	1130.5937047483737	2	566.3048095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LELSGSRLEQ_	ENSG00000170255|ENST00000526914|MRGPRX1;ENSG00000179826|ENST00000621697|MRGPRX3	72.87924865735499	0.25379688738724415	1				NaN	NaN	0	NaN	1437	3047	4485
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4487	18.18	NaN	533.45	30	0	105.24	0.035			+	31940	QQQLALLAK	9	28	506.810791015625	NaN	0	506.810791015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QQQLALLAK_	REV__ENSG00000126001|ENST00000397527|CEP250;REV__nc|ENSG00000126001|Q9BV73-2|CEP250	33.921630207806714	0.3063038642147651	1				NaN	NaN	0	NaN	1438	3047	4485
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4495	18.199	NaN	5059.6	30	0	1211	0.214	+			4225	ATGDLATSR	9	52	446.23026667548635	890.4459804177727	2	446.23016357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATGDLATSR_	ENSG00000167642|ENST00000301244|SPINT2;ENST00000590210.1_1_19:38755508-38778604:+|nuORF;nc|ENSG00000167642|O43291-2|SPINT2	154.1183686248401	0.005909203230691971	1				NaN	NaN	0	NaN	1443	3050	4494
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4496	18.203	NaN	5036	30	0	813.67	0.106	+			41064	SVIKNVSTK	9	67	488.2956650547405	974.576777176281	2	488.2957458496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVIKNVSTK_	ENSG00000122257|ENST00000319715|RBBP6;nc|ENSG00000122257|Q7Z6E9-2|RBBP6;nc|ENSG00000122257|Q7Z6E9-4|RBBP6;RBBP6|p.D1432Vfs*9|1|0.04|ENSG00000122257|chr16:24571360-24571361|-/TTTTCCCTTTTTC|frameshift_variant;RBBP6|p.T1475Lfs*20|1|0.3|ENSG00000122257|chr16:24571483-24571483|A/-|frameshift_variant	131.61620852596164	0.014413238321579053	1				NaN	NaN	0	NaN	1444	3050	4494
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4497	18.205	NaN	1862.3	30	0	431.28	0.037			+	-1	NQFPPCKKL	9	34	377.8719482421875	NaN	0	377.8719482421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_NQFPPC(Carbamidomethyl (C))KKL_	REV__ENST00000324787.9_2_7:140710339-140714730:-|nuORF;REV__ENST00000393008.7_1_7:140710339-140714460:-|nuORF	27.882242232435846	0.3367954786602879	1				NaN	NaN	0	NaN	1445	3050	4494
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4518	18.255	NaN	3933	30	0	781.37	0.214	+			45904	VAQGGGRAL	9	53	414.73785261716074	827.4611523011215	2	414.73834228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VAQGGGRAL_	ENSG00000140553|ENST00000418476|UNC45A;ENST00000487875.5_1_15:91491769-91496943:+|nuORF;nc|ENSG00000140553|Q9H3U1-2|UNC45A	68.78682469695295	0.14603441672067394	1				NaN	NaN	0	NaN	1460	3056	4517
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4519	18.259	NaN	3878.1	30	0	414.25	0.106	+			27132	MASRTSSEM	9	58	500.2155523727806	998.4165518123613	2	500.21563720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MASRTSSEM_	ENSG00000265972|ENST00000582401|TXNIP;ENST00000488537.1_1_1:145440673-145441098:+|nuORF;nc|ENSG00000265972|Q9H3M7-2|TXNIP	120.8684288430529	0.02067403653475984	1				NaN	NaN	0	NaN	1461	3056	4517
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4520	18.261	NaN	1625.6	30	0	444.57	0.106				-1	KPCSLEIAR	9	36	537.2917924578845	1072.569031982569	2	537.293212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_KPC(Carbamidomethyl (C))SLEIAR_	ENSG00000185046|ENST00000683438|ANKS1B;nc|ENSG00000185046|Q7Z6G8-6|ANKS1B;nc|ENSG00000185046|Q7Z6G8|ANKS1B	32.81241826257853	0.4965981579233955	1				NaN	NaN	0	NaN	1462	3056	4517
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4521	18.263	NaN	2573.9	30	0	1650.9	0.033			+	37541	SLLTAQSQ	8	40	424.2298326662501	NaN	0	424.22991943359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLLTAQSQ_	REV__ENSG00000186073|ENST00000566621|CDIN1;REV__ENST00000567573.5_1_15:36871929-36940867:+|nuORF;REV__ENST00000570265.5_1_15:36871929-37039277:+|nuORF	35.61828744233558	1.7418937515398478	1				NaN	NaN	0	NaN	1463	3056	4517
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4525	18.277	NaN	1156.5	30	0	308.62	0.214	+			5173	ATTGELAANK	10	45	488.2588237517279	NaN	0	488.2590637207031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATTGELAANK_	ENSG00000179222|ENST00000326587|MAGED1;ENST00000485420.5_1_X:51636757-51640983:+|nuORF;ENST00000494718.5_1_X:51637400-51640272:+|nuORF;MAGED1|p.P628Rfs*18|1|0.09|ENSG00000179222|chrX:51900215-51900215|C/-|frameshift_variant;nc|ENSG00000179222|Q9Y5V3-2|MAGED1	47.95952297671804	0.31850267256932663	1				NaN	NaN	0	NaN	1464	3059	4524
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4526	18.281	NaN	917.89	30	0	96.498	0.032	+			371	AARGNKKA	8	40	408.2445983886719	NaN	0	408.2445983886719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AARGNKKA_	H2AFY2|p.D70G|1|0.34|ENSG00000099284|chr10:70090096-70090096|A/G|missense_variant	33.51558372728122	1.7418937515398478	1				NaN	NaN	0	NaN	1465	3059	4524
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4534	18.301	NaN	2525.7	30	0	360.91	0.214			+	41360	SVMCKITTE	9	51	534.7572633618405	1067.499973790481	2	534.7584838867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SVMC(Carbamidomethyl (C))KITTE_	REV__ENST00000176763.9_1_5:171470328-171470631:-|nuORF	45.97224482568171	0.3502073465782774	1				NaN	NaN	0	NaN	1470	3062	4533
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4535	18.304	NaN	876.45	30	0	234.59	0.106			+	-1	MVEDGSWT	8	27	470.68760664802585	939.3606603628517	2	470.68817138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_M(Oxidation (M))VEDGSWT_	REV__CEP170|p.R1408G|1|0.08|ENSG00000143702|chr1:243139945-243139945|T/C|missense_variant	26.79610172149135	0.7524337208463756	1				NaN	NaN	0	NaN	1471	3062	4533
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4536	18.306	NaN	1143.6	30	0	252.7	0.033			+	-1	VTGCLALK	8	41	431.24787977602864	NaN	0	431.2474060058594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_VTGC(Carbamidomethyl (C))LALK_	REV__ENSG00000148824|ENST00000317502|MTG1;REV__ENST00000460848.5_1_10:135215574-135233666:+|nuORF;REV__ENST00000492266.1_1_10:135215046-135216278:+|nuORF	38.80614096846853	1.7418937515398478	1				NaN	NaN	0	NaN	1472	3062	4533
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4541	18.321	NaN	2594.5	30	0	690.71	0.214	+			35509	SAVAGKVVK	9	50	429.773933900488	857.533314867776	2	429.7740783691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAVAGKVVK_	nc|ENSG00000155090|Q13118-4|KLF10	42.396135135203025	0.392153681582562	1				NaN	NaN	0	NaN	1474	3065	4540
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4542	18.324	NaN	7565.8	30	0	771.28	0.038	+			17142	HSSVNYKGLR	10	59	387.5436924952547	1159.609248085964	3	387.8782043457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HSSVNYKGLR_	DPP4|p.D488Y|1|0.18|ENSG00000197635|chr2:162017114-162017114|C/A|missense_variant	50.033510581677724	0.4566913063131936	1				NaN	NaN	0	NaN	1475	3065	4540
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4549	18.342	NaN	6312.3	30	0	2479.8	0.214	+			5120	ATSSTLVSK	9	55	447.250608355186	892.486663777172	2	447.25091552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSSTLVSK_	ENST00000332782.6_1_12:57640633-57642538:-|nuORF	80.45461616416974	0.09558281504443908	1				NaN	NaN	0	NaN	1479	3068	4548
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4550	18.346	NaN	2997.6	30	0	399.73	0.106	+			44383	TSLGYEVQK	9	63	512.7688929907196	1023.5232330482391	2	512.7698364257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TSLGYEVQK_	ENSG00000003402|ENST00000309955|CFLAR;nc|ENSG00000003402|O15519-11|CFLAR;nc|ENSG00000003402|O15519-14|CFLAR;nc|ENSG00000003402|O15519-15|CFLAR;nc|ENSG00000003402|O15519-3|CFLAR;nc|ENSG00000003402|O15519-4|CFLAR;nc|ENSG00000003402|O15519-5|CFLAR;nc|ENSG00000003402|O15519-6|CFLAR;nc|ENSG00000003402|O15519-7|CFLAR;nc|ENSG00000003402|O15519-8|CFLAR	54.776311868738084	0.25715957988447635	1				NaN	NaN	0	NaN	1480	3068	4548
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4551	18.348	NaN	497.59	30	0	72.59	0.106	+			24993	LLEMNEKLP	9	34	543.7996368733532	NaN	0	543.7994995117188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LLEMNEKLP_	ENSG00000206530|ENST00000393845|CFAP44;nc|ENSG00000206530|Q96MT7-1|CFAP44	27.047317107675042	0.34101084205454363	1				NaN	NaN	0	NaN	1481	3068	4548
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4552	18.35	NaN	849.93	30	0	150.62	0.035	+			18386	IRESETKK	8	36	495.78302870711366	989.5515044810273	2	495.78387451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IRESETKK_	ENSG00000155926|ENST00000338087|SLA;ENST00000523224.5_1_8:134059955-134072405:-|nuORF;nc|ENSG00000155926|Q13239-2|SLA;nc|ENSG00000155926|Q13239-3|SLA;nc|ENSG00000155926|Q13239-4|SLA;nc|ENSG00000155926|Q13239-5|SLA	24.20275056022122	0.7724576178584145	1				NaN	NaN	0	NaN	1482	3068	4548
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4559	18.366	NaN	3782.3	30	0	859.12	0.214	+			3428	ASQKVYAMK	9	62	513.2737681210139	1024.5329833088276	2	513.275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASQKVYAMK_	ENSG00000134318|ENST00000315872|ROCK2;ROCK2|p.K1351Sfs*17|1|0.34|ENSG00000134318|chr2:11192259-11192259|T/-|frameshift_variant;ROCK2|p.S684Afs*5|1|0.34|ENSG00000134318|chr2:11211834-11211834|T/-|frameshift_variant	56.43379154798735	0.2433427591689151	1				NaN	NaN	0	NaN	1486	3071	4558
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4560	18.37	NaN	2222.7	30	0	766.9	0.106				-1	ATLLREMAA	9	30	331.17964692288143	990.5171113688443	3	331.1796569824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_ATLLREM(Oxidation (M))AA_	DNAH2|p.I2363Yfs*40|1|0.31|ENSG00000183914|chr17:7792278-7792278|C/-|frameshift_variant;DNAH2|p.K4326Rfs*84|3|0.27|ENSG00000183914|chr17:7832920-7832920|C/-|frameshift_variant;DNAH2|p.Q4263Sfs*13|1|0.12|ENSG00000183914|chr17:7832639-7832639|C/-|frameshift_variant;ENSG00000183914|ENST00000572933|DNAH2;nc|ENSG00000183914|Q9P225-2|DNAH2	25.57405402267927	0.5642445186134241	1				NaN	NaN	0	NaN	1487	3071	4558
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4561	18.372	NaN	1336.8	30	0	433.29	0.035	+			11898	FTTHHIQC	8	41	493.7306935887667	NaN	0	493.7313232421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FTTHHIQC_	ENST00000372309.7_2_9:133997886-133998192:+|nuORF	24.20275056022122	1.7418937515398478	1				NaN	NaN	0	NaN	1488	3071	4558
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4568	18.39	NaN	968.73	30	0	100.83	0.214	+			36107	SEKKQINVC	9	43	524.77721174836	NaN	0	524.777099609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEKKQINVC_	ENSG00000110713|ENST00000324932|NUP98;nc|ENSG00000110713|P52948-2|NUP98;nc|ENSG00000110713|P52948-6|NUP98;nc|ENSG00000110713|P52948|NUP98	31.529811441608018	0.3183796599642538	1				NaN	NaN	0	NaN	1492	3074	4567
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4569	18.393	NaN	1806.6	30	0	796.19	0.106			+	14124	GSLRLRGPTVE	11	39	395.5627746582031	NaN	0	395.5627746582031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSLRLRGPTVE_	REV__ENST00000375272.5_1_2:171673404-171675102:+|nuORF	18.531049691330335	0.456735970842152	1				NaN	NaN	0	NaN	1493	3074	4567
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4570	18.395	NaN	775.91	30	0	82.105	0.034	+			6944	CPHCKKVI	8	39	464.247802734375	NaN	0	464.247802734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_CPHCKKVI_	ENSG00000065485|ENST00000316218|PDIA5;ENST00000467157.1_1_3:122864388-122880365:+|nuORF	37.028477286268924	1.7418937515398478	1				NaN	NaN	0	NaN	1494	3074	4567
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4580	18.418	NaN	10731	30	0	3947.2	0.214	+			14475	GTCGKSLISK	10	71	525.7839665294407	1049.5533801256813	2	525.7855834960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GTC(Carbamidomethyl (C))GKSLISK_	ENSG00000118322|ENST00000327245|ATP10B	162.63603312974413	0.006026810256601855	1				NaN	NaN	0	NaN	1501	3077	4579
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4581	18.422	NaN	5845.3	30	0	1549.3	0.106			+	15794	GVVHRGVPS	9	57	454.258190200468	906.501827467736	2	454.2586364746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GVVHRGVPS_	REV__nc|ENSG00000134644|Q14671-4|PUM1	76.84663266511073	0.11118375776443899	1				NaN	NaN	0	NaN	1502	3077	4579
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4582	18.424	NaN	3335.9	30	0	324.79	0.038			+	16099	HDGDIHAFRM	10	62	599.7745685665919	1197.5345841999838	2	599.7759399414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HDGDIHAFRM_	REV__ENSG00000109606|ENST00000336812|DHX15;REV__ENST00000508032.5_1_4:24529549-24538851:-|nuORF	56.72105179125745	0.3956618550748046	1				NaN	NaN	0	NaN	1503	3077	4579
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4588	18.44	NaN	1465.5	30	0	183.59	0.214				-1	LSSMGSRAF	9	48	486.2346183457173	970.4546837582346	2	486.2347717285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LSSM(Oxidation (M))GSRAF_	ENST00000585509.5_1_17:76671875-76672019:-|nuORF	40.77816245573522	0.41113185337114944	1				NaN	NaN	0	NaN	1506	3080	4587
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4589	18.444	NaN	983.46	30	0	169	0.032	+			1679	AGSSNVKF	8	39	405.2107849121094	NaN	0	405.2107849121094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AGSSNVKF_	MYBPC3|p.K87N|1|0.1|ENSG00000134571|chr11:47351270-47351270|C/A|missense_variant	23.04248740728303	1.7418937515398478	1				NaN	NaN	0	NaN	1507	3080	4587
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4596	18.462	NaN	4586.8	30	0	793.16	0.214	+			108	AAEKGVRTL	9	57	472.7796427992561	943.5447326653123	2	472.7791442871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAEKGVRTL_	ENSG00000105355|ENST00000221957|PLIN3;nc|ENSG00000105355|O60664-3|PLIN3;nc|ENSG00000105355|O60664-4|PLIN3	68.84614121027924	0.14577793175421136	1				NaN	NaN	0	NaN	1511	3083	4595
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4597	18.465	NaN	2851.7	30	0	600.07	0.106			+	-1	SAKESMDIQ	9	56	512.7357012588541	1023.4568495845082	2	512.7369995117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_SAKESM(Oxidation (M))DIQ_	REV__ENSG00000067798|ENST00000397909|NAV3;REV__NAV3|p.K1098Nfs*81|1|0.22|ENSG00000067798|chr12:78119487-78119487|A/-|frameshift_variant;REV__NAV3|p.K1745Sfs*14|1|0.13|ENSG00000067798|chr12:78177244-78177244|C/-|frameshift_variant;REV__NAV3|p.L1995Sfs*5|1|0.05|ENSG00000067798|chr12:78188704-78188705|-/T|frameshift_variant;REV__NAV3|p.T2082Qfs*22|1|0.13|ENSG00000067798|chr12:78190166-78190166|A/-|frameshift_variant;REV__nc|ENSG00000067798|Q8IVL0-2|NAV3;REV__nc|ENSG00000067798|Q8IVL0-3|NAV3	47.95952297671804	0.32689736945648856	1				NaN	NaN	0	NaN	1512	3083	4595
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4598	18.467	NaN	1478.6	30	0	326.36	0.106			+	32671	RADLQRALL	9	47	528.3198827251296	NaN	0	528.3198852539062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RADLQRALL_	REV__ENSG00000025423|ENST00000322165|HSD17B6;REV__ENSG00000139547|ENST00000398138|RDH16;REV__RDH16|p.R278Vfs*17|1|0.25|ENSG00000139547|chr12:56952151-56952151|G/-|frameshift_variant	38.753607047826485	0.28190821760017076	1				NaN	NaN	0	NaN	1513	3083	4595
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4599	18.469	NaN	889.01	30	0	117.16	0.032	+			15594	GVIKAVDK	8	40	415.25994873046875	NaN	0	415.25994873046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GVIKAVDK_	ENSG00000156508|ENST00000309268|EEF1A1;ENST00000417549.1_1_13:28789725-28790031:+|nuORF;ENST00000419025.1_1_3:183744159-183744318:-|nuORF;ENST00000436459.2_1_9:135895553-135896258:+|nuORF;ENST00000443590.1_1_2:107313789-107313948:-|nuORF;ENST00000513637.1_1_5:43495177-43495438:-|nuORF;ENST00000559385.1_1_15:53229359-53229566:-|nuORF;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	84.9155231211612	1.7418937515398478	1				NaN	NaN	0	NaN	1514	3083	4595
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4609	18.491	NaN	14360	30	0	2877.6	0.214	+			39438	STEKIYIRK	9	65	379.89231055919174	1136.6551022777753	3	379.892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STEKIYIRK_	ENSG00000120798|ENST00000333003|NR2C1;ENSG00000177463|ENST00000425241|NR2C2;ENST00000475707.5_1_3:15045421-15079667:+|nuORF;nc|ENSG00000120798|P13056-2|NR2C1;nc|ENSG00000120798|P13056-3|NR2C1;nc|ENSG00000177463|P49116-2|NR2C2;NR2C2|p.F563Lfs*10|1|0.4|ENSG00000177463|chr3:15042899-15042899|T/-|frameshift_variant	78.26377905018397	0.10505600812668463	1				NaN	NaN	0	NaN	1521	3086	4608
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4610	18.494	NaN	3283.7	30	0	657.03	0.106	+			40571	SVAEHPLSR	9	57	498.26725855249833	994.5199641717967	2	498.2679748535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVAEHPLSR_	ENSG00000142207|ENST00000382751|URB1;URB1|p.R2106W|1|0.08|ENSG00000142207|chr21:32316784-32316784|G/A|missense_variant	88.17693792209575	0.07000514020414955	1				NaN	NaN	0	NaN	1522	3086	4608
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4611	18.496	NaN	1042.8	30	0	93.045	0.106	+			6864	CLAAGCSVIA	10	51	454.2221621815266	NaN	0	454.2221374511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_CLAAGCSVIA_	ENSG00000109685|ENST00000508803|NSD2;ENST00000353275.9_2_4:1944147-1980633:+|nuORF;nc|ENSG00000109685|O96028-2|NSD2;nc|ENSG00000109685|O96028-4|NSD2	63.30626980617807	0.2072786894693966	1				NaN	NaN	0	NaN	1523	3086	4608
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4612	18.498	NaN	1093	30	0	283.81	0.034	+			31600	QLTVNSEK	8	44	459.74806220458817	NaN	0	459.7484436035156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QLTVNSEK_	ENSG00000103723|ENST00000535359|AP3B2;ENST00000537735.1_1_15:83328314-83331023:-|nuORF;ENST00000543938.5_1_15:83328314-83349061:-|nuORF;nc|ENSG00000103723|Q13367-2|AP3B2;nc|ENSG00000103723|Q13367-3|AP3B2;nc|ENSG00000103723|Q13367|AP3B2	34.172542307311794	1.7418937515398478	1				NaN	NaN	0	NaN	1524	3086	4608
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4621	18.518	NaN	300140	30	0	96800	0.214	+			2964	ASFDKAKLK	9	103	504.2978640655278	1006.5811751978556	2	504.2977600097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASFDKAKLK_	ENSG00000034510|ENST00000233143|TMSB10	159.27591364854348	0.004707062175358555	1				NaN	NaN	0	NaN	1530	3089	4620
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4622	18.522	NaN	13823	30	0	6096	0.106	+			14439	GTATTMVSK	9	71	448.23095672872245	894.4473605242449	2	448.23095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTATTMVSK_	ENSG00000204217|ENST00000374580|BMPR2	117.81106730687013	0.02252488733980868	1				NaN	NaN	0	NaN	1531	3089	4620
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4623	18.524	NaN	4028	30	0	493.27	0.106	+			12710	GEKSVHEGAL	10	63	513.7639508832486	1025.5133488332972	2	513.7646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEKSVHEGAL_	ENSG00000079819|ENST00000337057|EPB41L2	66.96192283764107	0.30252237217063654	1				NaN	NaN	0	NaN	1532	3089	4620
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4624	18.526	NaN	2578.4	30	0	322.88	0.036	+			15960	HAHVDKVTY	9	54	535.2755737304688	NaN	0	535.2755737304688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HAHVDKVTY_	ENSG00000181396|ENST00000313056|OGFOD3;nc|ENSG00000181396|Q6PK18-2|OGFOD3	131.03138772384656	0.00042866051192282686	1				NaN	NaN	0	NaN	1533	3089	4620
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4628	18.538	NaN	7800.9	30	0	2283.9	0.142	+			40295	STSSPYVSK	9	52	478.24007358466537	954.4655942361308	2	478.2402648925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STSSPYVSK_	ENSG00000137501|ENST00000359152|SYTL2;ENST00000438197.2_1_11:85444955-85468786:-|nuORF;nc|ENSG00000137501|Q9HCH5-13|SYTL2;nc|ENSG00000137501|Q9HCH5-14|SYTL2;nc|ENSG00000137501|Q9HCH5-15|SYTL2;nc|ENSG00000137501|Q9HCH5-6|SYTL2;nc|ENSG00000137501|Q9HCH5|SYTL2;SYTL2|p.Q663Tfs*35|1|0.14|ENSG00000137501|chr11:85709344-85709345|-/T|frameshift_variant	127.46168284122857	0.016682644177004526	1				NaN	NaN	0	NaN	1534	3092	4627
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4649	18.588	NaN	2159.3	30	0	395.65	0.214			+	3552	ASTILVVCAI	10	59	495.29074488539084	988.5669368375817	2	495.29022216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASTILVVCAI_	REV__ENST00000510841.1_1_4:151935827-151936681:-|nuORF	40.05817265558897	0.5486090488315611	1				NaN	NaN	0	NaN	1549	3098	4648
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4650	18.591	NaN	11662	30	0	2472.3	0.033	+			3725	ATAAVSSMK	9	62	433.2256601907799	864.4367674483598	2	433.7271423339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATAAVSSMK_	ADD3-MXI1|1|fusion;ENSG00000148700|ENST00000356080|ADD3;nc|ENSG00000148700|Q9UEY8-2|ADD3	159.27591364854348	0.004707062175358555	1				NaN	NaN	0	NaN	1550	3098	4648
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4655	18.605	NaN	4659.7	30	0	1231.3	0.214	+			29002	NSNECVVCLS	10	53	534.2280750803728	1066.4415972275456	2	534.2291259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NSNECVVCLS_	ENSG00000102858|ENST00000262370|MGRN1;ENST00000588015.5_1_16:4721412-4726932:+|nuORF;nc|ENSG00000102858|O60291-3|MGRN1;nc|ENSG00000102858|O60291-4|MGRN1;nc|ENSG00000102858|O60291|MGRN1	54.776311868738084	0.41334902933431344	1				NaN	NaN	0	NaN	1552	3101	4654
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4656	18.608	NaN	3299.6	30	0	1263.7	0.106	+			4729	ATMKTELQK	9	61	525.286086703251	1048.557620473302	2	525.287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATMKTELQK_	ENSG00000096696|ENST00000379802|DSP;nc|ENSG00000096696|P15924-2|DSP;nc|ENSG00000096696|P15924-3|DSP	101.25262130126117	0.03792372629710479	1				NaN	NaN	0	NaN	1553	3101	4654
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4657	18.61	NaN	1706.3	30	0	231.3	0.106	+			14706	GTIGMRPNAK	10	58	522.783955723432	1043.5533585136639	2	522.7857055664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTIGMRPNAK_	ENSG00000126457|ENST00000454376|PRMT1;ENST00000530361.5_1_19:50188842-50191499:+|nuORF;nc|ENSG00000126457|Q99873-2|PRMT1;nc|ENSG00000126457|Q99873-3|PRMT1;nc|ENSG00000126457|Q99873-5|PRMT1	56.43379154798735	0.3982744522255666	1				NaN	NaN	0	NaN	1554	3101	4654
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4658	18.612	NaN	1422.7	30	0	221.92	0.106	+			6255	AVSKLYASK	9	58	483.784156940717	965.5537609482341	2	483.7845458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVSKLYASK_	ENSG00000115561|ENST00000263856|CHMP3;ENST00000466032.1_1_2:86754275-86769420:-|nuORF;nc|ENSG00000115561|Q9Y3E7-2|CHMP3;nc|ENSG00000115561|Q9Y3E7-3|CHMP3	83.6470233535746	0.08277643980271215	1				NaN	NaN	0	NaN	1555	3101	4654
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4659	18.614	NaN	936.86	30	0	377.45	0.106	+			5307	ATVLEAETRRL	11	30	420.2418212890625	NaN	0	420.2418212890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATVLEAETRRL_	ENSG00000126001|ENST00000397527|CEP250;nc|ENSG00000126001|Q9BV73-2|CEP250	23.37791116691581	0.456735970842152	1				NaN	NaN	0	NaN	1556	3101	4654
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4660	18.616	NaN	985.01	30	0	180.58	0.106				-1	GTASSLVSPA	10	37	466.239636703207	930.464720473214	2	466.2400207519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))GTASSLVSPA_	ENSG00000113971|ENST00000337331|NPHP3;nc|ENSG00000113971|Q7Z494-3|NPHP3;nc|ENSG00000113971|Q7Z494-4|NPHP3;nc|ENSG00000113971|Q7Z494-5|NPHP3;nc|ENSG00000113971|Q7Z494-6|NPHP3;nc|ENSG00000113971|Q7Z494-7|NPHP3;NPHP3|p.T136Rfs*13|1|0.38|ENSG00000113971|chr3:132719818-132719818|T/-|frameshift_variant	42.396135135203025	0.5270658956260207	1				NaN	NaN	0	NaN	1557	3101	4654
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4661	18.617	NaN	893.48	30	0	94.847	0.038			+	9908	EQPYGISVLR	10	38	387.87884521484375	NaN	0	387.87884521484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EQPYGISVLR_	REV__ENSG00000076685|ENST00000404739|NT5C2;REV__nc|ENSG00000076685|P49902-2|NT5C2;REV__NT5C2|p.F172Lfs*30|1|0.44|ENSG00000076685|chr10:103101068-103101068|A/-|frameshift_variant	32.03412808689991	0.3949916132702916	1				NaN	NaN	0	NaN	1558	3101	4654
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4672	18.643	NaN	4531.6	30	0	1196	0.214	+			40091	STNSPVGVSK	10	58	488.25884246573156	974.5031319982631	2	488.2583312988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STNSPVGVSK_	ENSG00000165671|ENST00000439151|NSD1;nc|ENSG00000165671|Q96L73-2|NSD1;nc|ENSG00000165671|Q96L73-3|NSD1;NSD1|p.K1753Sfs*10|1|0.17|ENSG00000165671|chr5:177267669-177267669|A/-|frameshift_variant	88.1336951990783	0.14175885391278442	1				NaN	NaN	0	NaN	1566	3104	4671
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4673	18.646	NaN	5892.7	30	0	2203.8	0.106				-1	 	0	33	350.5265189551337	1048.5577274656011	3	350.526611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	1567	3104	4671
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4674	18.648	NaN	1656.3	30	0	209.16	0.106	+			19983	KEIDKEEHL	9	54	570.797479465433	1139.5804059976658	2	570.7976684570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEIDKEEHL_	ENSG00000154545|ENST00000471932|MAGED4;ENSG00000179222|ENST00000326587|MAGED1;ENSG00000187243|ENST00000335504|MAGED4B;ENST00000470594.5_1_X:51805328-51809606:-|nuORF;ENST00000479281.5_1_X:51931784-51932886:+|nuORF;ENST00000485420.5_1_X:51636757-51640983:+|nuORF;ENST00000494718.5_1_X:51640434-51640983:+|nuORF;MAGED1|p.P628Rfs*18|1|0.09|ENSG00000179222|chrX:51900215-51900215|C/-|frameshift_variant;nc|ENSG00000179222|Q9Y5V3-2|MAGED1;nc|ENSG00000187243|Q96JG8-2|MAGED4;nc|ENSG00000187243|Q96JG8-4|MAGED4	78.26377905018397	0.10505600812668463	1				NaN	NaN	0	NaN	1568	3104	4671
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4675	18.65	NaN	830.93	30	0	114.33	0.035			+	41392	SVMLQVTVL	9	48	495.29074488539084	988.5669368375817	2	495.287841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVMLQVTVL_	REV__ENSG00000160716|ENST00000368476|CHRNB2	29.170058357718403	0.5306379469863586	1				NaN	NaN	0	NaN	1569	3104	4671
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4686	18.675	NaN	9219.6	30	0	1083.9	0.214	+			20198	KELEKTYSA	9	82	534.7828979582099	NaN	0	534.7830200195312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KELEKTYSA_	ENSG00000160789|ENST00000368300|LMNA;ENST00000496738.5_1_1:156104631-156105741:+|nuORF;nc|ENSG00000160789|P02545-2|LMNA;nc|ENSG00000160789|P02545-3|LMNA;nc|ENSG00000160789|P02545-4|LMNA;nc|ENSG00000160789|P02545-5|LMNA;nc|ENSG00000160789|P02545-6|LMNA	89.02883481214508	0.043554178677197526	1				NaN	NaN	0	NaN	1577	3107	4685
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4687	18.679	NaN	2061.9	30	0	913.66	0.106	+			19871	KEEMKSCGVSN	11	35	606.2728949196304	1210.5312369060607	2	606.273681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEEMKSCGVSN_	ENSG00000116903|ENST00000366645|EXOC8	19.262678746197807	0.7802940895261122	1				NaN	NaN	0	NaN	1578	3107	4685
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4688	18.681	NaN	4935.6	30	0	763.78	0.034	+			40138	STQIVANAK	9	57	466.26343381846334	930.5123147037267	2	466.2632751464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STQIVANAK_	ENSG00000147872|ENST00000276914|PLIN2;PLIN2|p.V348*|1|0.15|ENSG00000147872|chr9:19116520-19116520|C/-|frameshift_variant	88.17693792209575	0.07000514020414955	1				NaN	NaN	0	NaN	1579	3107	4685
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4699	18.704	NaN	5332.6	30	0	715.93	0.214	+			43357	TGDPNSKAL	9	65	451.73222642926225	901.4498999253245	2	451.73236083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TGDPNSKAL_	ENSG00000172828|ENST00000303334|CES3;nc|ENSG00000172828|Q6UWW8-2|CES3	98.58198989935565	0.04066992115528678	1				NaN	NaN	0	NaN	1587	3110	4698
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4700	18.708	NaN	1174.2	30	0	348.88	0.106	+			5780	AVGSAVVNK	9	33	422.7479497150741	843.4813464969483	2	422.7478332519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVGSAVVNK_	ENSG00000151135|ENST00000280756|TMEM263	53.351449002276354	0.2690372970092375	1				NaN	NaN	0	NaN	1588	3110	4698
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4701	18.71	NaN	1458.5	30	0	236.26	0.106			+	24928	LKSNKGVQ	8	46	437.26100912363063	NaN	0	437.2608642578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LKSNKGVQ_	REV__ENST00000489995.1_1_3:171483216-171489014:-|nuORF	55.50420428727701	1.7418937515398478	1				NaN	NaN	0	NaN	1589	3110	4698
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4702	18.712	NaN	4837.4	30	0	599.2	0.106			+	-1	WCLWILKL	8	49	377.88379966158186	1130.6295695849456	3	377.8841247558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_WC(Carbamidomethyl (C))LWILKL_	REV__ENST00000439887.6_1_16:11980784-11981455:-|nuORF	31.954861631926434	0.7126016770032289	1				NaN	NaN	0	NaN	1590	3110	4698
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4703	18.713	NaN	2754.6	30	0	204.59	0.106	+			20910	KITLLHRTQ	9	44	370.56435095270456	NaN	0	370.8984069824219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KITLLHRTQ_	MTDH|p.K447Rfs*19|1|0.29|ENSG00000147649|chr8:97713722-97713722|A/-|frameshift_variant	47.95952297671804	0.22075498469600283	1				NaN	NaN	0	NaN	1591	3110	4698
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4704	18.715	NaN	6357.5	30	0	910.05	0.038				-1	ASLHGRIYCK	10	66	402.2130747076078	NaN	0	402.2132568359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_ASLHGRIYC(Carbamidomethyl (C))K_	ENSG00000050405|ENST00000341247|LIMA1;LIMA1|p.T536Lfs*38|2|0.4|ENSG00000050405|chr12:50177739-50177739|G/-|frameshift_variant;nc|ENSG00000050405|Q9UHB6-2|LIMA1;nc|ENSG00000050405|Q9UHB6-3|LIMA1;nc|ENSG00000050405|Q9UHB6-4|LIMA1;nc|ENSG00000050405|Q9UHB6-5|LIMA1	45.02220120713402	0.3370728479115332	1				NaN	NaN	0	NaN	1592	3110	4698
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4705	18.716	NaN	2202.7	30	0	334.93	0.141	+			33043	REKEIKSEL	9	59	566.3218314460032	1130.6291099588063	2	566.3225708007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_REKEIKSEL_	ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC;PRKDC|p.K3681Nfs*6|1|0.32|ENSG00000253729|chr8:47785174-47785177|TTCT/-|frameshift_variant;PRKDC|p.M3670*|1|0.5|ENSG00000253729|chr8:47785212-47785212|T/-|frameshift_variant;PRKDC|p.M3846Cfs*12|1|0.13|ENSG00000253729|chr8:47779047-47779047|T/-|frameshift_variant;PRKDC|p.M4020Cfs*2|1|0.31|ENSG00000253729|chr8:47776968-47776968|T/-|frameshift_variant;PRKDC|p.N3605Kfs*3|1|0.22|ENSG00000253729|chr8:47788993-47788994|-/T|frameshift_variant;PRKDC|p.N4037Ifs*15|1|0.17|ENSG00000253729|chr8:47776916-47776916|T/-|frameshift_variant;PRKDC|p.S3402Ifs*16|1|0.04|ENSG00000253729|chr8:47799302-47799303|-/AAACCGTGAGTTAGAGGAGGTAA|frameshift_variant;PRKDC|p.S4099Qfs*6|1|0.25|ENSG00000253729|chr8:47774265-47774265|A/-|frameshift_variant;PRKDC|p.T3268Pfs*7|1|0.5|ENSG00000253729|chr8:47803426-47803426|T/-|frameshift_variant;PRKDC|p.W3401Cfs*4|1|0.01|ENSG00000253729|chr8:47799304-47799305|-/AATGAATA|frameshift_variant	66.96192283764107	0.15557981141143568	1				NaN	NaN	0	NaN	1593	3110	4698
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4716	18.743	NaN	2251.9	30	0	359.82	0.214	+			20137	KEKPEEESL	9	59	544.7774191996606	NaN	0	544.7774047851562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEKPEEESL_	ENSG00000148396|ENST00000684901|SEC16A;nc|ENSG00000148396|O15027-2|SEC16A;nc|ENSG00000148396|O15027-3|SEC16A;nc|ENSG00000148396|O15027-4|SEC16A;nc|ENSG00000148396|O15027-5|SEC16A;SEC16A|p.P2155Hfs*25|1|0.25|ENSG00000148396|chr9:136447664-136447664|G/-|frameshift_variant	85.16082228582465	0.053699699744190164	1				NaN	NaN	0	NaN	1601	3113	4715
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4717	18.747	NaN	853.55	30	0	106.25	0.106			+	30969	QEQIKQKGG	9	40	508.2801744254622	NaN	0	508.2802429199219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QEQIKQKGG_	REV__DZIP1L|p.K200I|1|0.37|ENSG00000158163|chr3:138094971-138094971|T/A|missense_variant	51.19269402634007	0.19847346126499396	1				NaN	NaN	0	NaN	1602	3113	4715
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4718	18.749	NaN	7343.2	30	0	989.57	0.106	+			34551	RVLEAIQKK	9	60	362.23249778561154	1083.6756639570347	3	362.2325134277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RVLEAIQKK_	ENSG00000169375|ENST00000394947|SIN3A;SIN3A|p.G659Afs*26|1|0.14|ENSG00000169375|chr15:75396375-75396375|C/-|frameshift_variant	106.88024417677582	0.032181361622142884	1				NaN	NaN	0	NaN	1603	3113	4715
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4719	18.75	NaN	979.43	30	0	193.2	0.035			+	10093	ESLEQVPSF	9	35	518.2534655427552	1034.4923781523103	2	518.2546997070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ESLEQVPSF_	REV__ENSG00000111266|ENST00000298573|DUSP16	37.15910966729921	0.4535818937225704	1				NaN	NaN	0	NaN	1604	3113	4715
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4730	18.776	NaN	5804.5	30	0	728.17	0.214	+			19518	KAVNPGRSL	9	57	471.2794579760937	940.5443630189874	2	471.2799072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAVNPGRSL_	ENSG00000103429|ENST00000261658|BFAR;nc|ENSG00000103429|Q9NZS9-2|BFAR	82.24051045832904	0.08786059719216216	1				NaN	NaN	0	NaN	1612	3116	4729
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4731	18.779	NaN	5431.3	30	0	1651.6	0.106			+	10346	ETTSSVTPL	9	61	467.74083383786217	NaN	0	467.7404479980469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ETTSSVTPL_	REV__ENST00000483977.5_1_21:35497749-35514781:+|nuORF	53.351449002276354	0.18359631779194618	1				NaN	NaN	0	NaN	1613	3116	4729
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4732	18.781	NaN	1278.4	30	0	207.96	0.106	+			39996	STMSACASTAR	11	50	571.750434559276	NaN	0	571.7501220703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_STMSAC(Carbamidomethyl (C))ASTAR_	ENST00000566749.5_1_16:30094754-30094823:+|nuORF	58.62960593111931	0.24601218480532056	1				NaN	NaN	0	NaN	1614	3116	4729
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4733	18.783	NaN	1304.8	30	0	267.77	0.106			+	13540	GLSGGVLGK	9	35	394.2371108367711	786.4596687403422	2	394.2371520996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GLSGGVLGK_	REV__ENSG00000214787|ENST00000651255|MS4A4E	44.116797842482775	0.37197099687881774	1				NaN	NaN	0	NaN	1615	3116	4729
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4734	18.785	NaN	637.44	30	0	55.911	0.038				-1	KGPKLKMPDM	10	41	387.5438232421875	NaN	0	387.5438232421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_KGPKLKM(Oxidation (M))PDM_	AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK	27.047317107675042	0.41136583337917604	1				NaN	NaN	0	NaN	1616	3116	4729
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4744	18.807	NaN	10753	30	0	3838.9	0.214	+			50325	WTMGGATVI	9	59	468.2373804884561	934.4602080437122	2	468.2374267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WTMGGATVI_	EBF1|p.T275M|1|0.37|ENSG00000164330|chr5:158796430-158796430|G/A|missense_variant	71.29570347882199	0.13518600952103718	1				NaN	NaN	0	NaN	1623	3119	4743
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4745	18.81	NaN	18784	30	0	7838.6	0.106				-1	 	0	68	417.2396544965446	832.4647560598892	2	417.23992919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	1624	3119	4743
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4746	18.812	NaN	11048	30	0	2353.2	0.106			+	-1	SSRDGCIACIH	11	66	406.8496054016398	1217.5269868051193	3	406.8497314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SSRDGCIAC(Carbamidomethyl (C))IH_	REV__ENSG00000143171|ENST00000359842|RXRG;REV__ENSG00000186350|ENST00000481739|RXRA;REV__nc|ENSG00000186350|P19793-2|RXRA	26.063383197487333	0.7164075632144343	1				NaN	NaN	0	NaN	1625	3119	4743
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4747	18.814	NaN	2078.3	30	0	278.15	0.106	+			29649	PGLAGKNG	8	40	357.200514040046	712.386475146892	2	357.2007751464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PGLAGKNG_	COL6A2|p.P584Lfs*12|1|0.46|ENSG00000142173|chr21:46124896-46124896|C/-|frameshift_variant;ENSG00000142173|ENST00000300527|COL6A2;nc|ENSG00000142173|P12110-2|COL6A2;nc|ENSG00000142173|P12110-3|COL6A2	35.200714571348534	0.6875396545722289	1				NaN	NaN	0	NaN	1626	3119	4743
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4748	18.816	NaN	2218.7	30	0	421.52	0.106	+			39985	STMPHTSGMNR	11	46	609.7702037843732	1217.5258546355462	2	609.771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STMPHTSGMNR_	ENSG00000150907|ENST00000379561|FOXO1	61.76455937419982	0.30770400073182314	1				NaN	NaN	0	NaN	1627	3119	4743
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4749	18.817	NaN	885.36	30	0	161.85	0.106			+	9227	EGSRFAKR	8	40	475.7606848446585	NaN	0	475.7608642578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EGSRFAKR_	REV__ENSG00000111199|ENST00000261740|TRPV4;REV__nc|ENSG00000111199|Q9HBA0-2|TRPV4;REV__nc|ENSG00000111199|Q9HBA0-3|TRPV4;REV__nc|ENSG00000111199|Q9HBA0-4|TRPV4;REV__nc|ENSG00000111199|Q9HBA0-5|TRPV4;REV__nc|ENSG00000111199|Q9HBA0-6|TRPV4	30.503639358989545	1.7418937515398478	1				NaN	NaN	0	NaN	1628	3119	4743
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4750	18.819	NaN	819.98	30	0	101.96	0.036	+			12803	GEMHRELNA	9	39	528.7492065429688	NaN	0	528.7492065429688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GEMHRELNA_	ENSG00000119888|ENST00000263735|EPCAM;EPCAM|p.E304A|1|0.32|ENSG00000119888|chr2:47386579-47386579|A/C|missense_variant	22.579656572578934	0.3605601358598771	1				NaN	NaN	0	NaN	1629	3119	4743
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4764	18.849	NaN	2739.6	30	0	1300.4	0.214	+			42880	TEHAHQVVV	9	35	510.2665938924669	1018.5186348517339	2	510.2669982910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEHAHQVVV_	ENSG00000071127|ENST00000499869|WDR1	29.14955571784316	0.5308295550522326	1				NaN	NaN	0	NaN	1640	3122	4763
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4765	18.853	NaN	599.82	30	0	43.076	0.106			+	32332	QTTQIEKL	8	37	480.77110902129715	NaN	0	480.771240234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QTTQIEKL_	REV__ENSG00000156970|ENST00000287598|BUB1B;REV__nc|ENSG00000156970|O60566-2|BUB1B;REV__nc|ENSG00000156970|O60566-3|BUB1B	74.25504064058377	1.7418937515398478	1				NaN	NaN	0	NaN	1641	3122	4763
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4766	18.854	NaN	882.44	30	0	171.55	0.106	+			25491	LPSENHKEM	9	33	542.7592163085938	NaN	0	542.7592163085938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LPSENHKEM_	ENSG00000025772|ENST00000372813|TOMM34	51.52775601994872	0.19616436856719055	1				NaN	NaN	0	NaN	1642	3122	4763
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4767	18.856	NaN	1217	30	0	172.83	0.106	+			19679	KDPGLGLKVA	10	41	499.3055098166071	996.5964667000143	2	499.3056335449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KDPGLGLKVA_	ENST00000560877.5_1_14:103799973-103800743:+|nuORF	25.125986553469783	0.6746423231557295	1				NaN	NaN	0	NaN	1643	3122	4763
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4768	18.858	NaN	2312.7	30	0	552.29	0.106			+	-1	LWCIPLHKPQ	10	51	431.2359301614668	1290.6859610846004	3	431.2367858886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_LWC(Carbamidomethyl (C))IPLHKPQ_	REV__ENST00000581487.1_1_16:66655025-66655589:-|nuORF	28.081489160057373	0.6505064946289502	1				NaN	NaN	0	NaN	1644	3122	4763
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4769	18.86	NaN	804.97	30	0	193.77	0.037			+	46030	VAVVECNVDH	10	33	362.17471512693453	NaN	0	362.1743469238281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VAVVECNVDH_	REV__ENSG00000165672|ENST00000298510|PRDX3;REV__nc|ENSG00000165672|P30048-2|PRDX3	27.047317107675042	0.41136583337917604	1				NaN	NaN	0	NaN	1645	3122	4763
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4770	18.86	NaN	352.75	30	0	70.066	0.142	+			32777	RARTQLPPAK	10	21	569.34375	NaN	0	569.34375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RARTQLPPAK_	ENST00000395379.5_1_8:133787694-133790038:+|nuORF	9.182911543092327	0.4201028297492154	1				NaN	NaN	0	NaN	1646	3122	4763
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4783	18.89	NaN	8873.2	30	0	3328.7	0.214	+			2965	ASFDKAKLK	9	60	504.2978640655278	1006.5811751978556	2	504.2978820800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASFDKAKLK_	ENSG00000034510|ENST00000233143|TMSB10	120.8684288430529	0.02067403653475984	1				NaN	NaN	0	NaN	1656	3125	4782
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4784	18.893	NaN	15241	30	0	2513.8	0.106	+			49320	VVSEKQFSK	9	76	526.2920354477244	1050.5695179622487	2	526.29296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVSEKQFSK_	ENSG00000163584|ENST00000295830|RPL22L1	131.08727773389177	0.014661380957658584	1				NaN	NaN	0	NaN	1657	3125	4782
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4785	18.895	NaN	15135	30	0	4351.5	0.106			+	73	AAATSVTLK	9	72	431.25536755436013	860.4961821755203	2	431.2554016113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AAATSVTLK_	REV__ENSG00000258366|ENST00000360203|RTEL1;REV__ENST00000480273.5_1_20:62319266-62327135:+|nuORF;REV__ENST00000496281.1_1_20:62323608-62327208:+|nuORF;REV__ENST00000496816.5_1_20:62325699-62327208:+|nuORF;REV__nc|ENSG00000258366|Q9NZ71-2|RTEL1;REV__nc|ENSG00000258366|Q9NZ71-5|RTEL1;REV__nc|ENSG00000258366|Q9NZ71-7|RTEL1;REV__nc|ENSG00000258366|Q9NZ71-9|RTEL1;REV__nc|ENSG00000258366|Q9NZ71|RTEL1	64.20726635412375	0.17854274437659667	1				NaN	NaN	0	NaN	1658	3125	4782
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4786	18.897	NaN	5298.5	30	0	976.18	0.106	+			745	AEDKPRAQL	9	64	514.2797104734627	1026.5448680137254	2	514.2801513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEDKPRAQL_	ENSG00000105656|ENST00000262809|ELL	62.107414245175825	0.1960472003779324	1				NaN	NaN	0	NaN	1659	3125	4782
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4787	18.899	NaN	28069	30	0	2219.9	0.106			+	-1	ERLFTMCIPCA	11	88	466.55142033621024	1396.6324316088308	3	466.551513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C)	_ERLFTMC(Carbamidomethyl (C))IPC(Carbamidomethyl (C))A_	REV__ENSG00000167333|ENST00000300747|TRIM68;REV__ENST00000532108.1_1_11:4623360-4626734:-|nuORF;REV__TRIM68|p.H390Tfs*6|1|0.36|ENSG00000167333|chr11:4600566-4600566|G/-|frameshift_variant	36.31764250033197	0.6083289427130232	1				NaN	NaN	0	NaN	1660	3125	4782
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4788	18.901	NaN	2107.6	30	0	569.66	0.035				-1	 	0	45	501.77310542550634	1001.5316579178127	2	501.7726135253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	1661	3125	4782
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4789	18.901	NaN	2546.6	30	0	561.57	0.138			+	45691	VAAGQGELK	9	49	436.7454406983962	871.4763284635924	2	436.7453918457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VAAGQGELK_	REV__ENST00000512894.5_3_3:134205095-134225968:+|nuORF;REV__ENST00000513612.6_1_3:134205095-134225968:+|nuORF	65.80317337860623	0.1652391959156183	1				NaN	NaN	0	NaN	1662	3125	4782
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4800	18.927	NaN	4700.2	30	0	666.97	0.214			+	31227	QGWRSGPTKG	10	67	537.2776293774133	1072.5407058216265	2	537.278564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QGWRSGPTKG_	REV__ENST00000413282.6_1_1:156552045-156554937:+|nuORF;REV__ENST00000495690.6_1_1:156552093-156554937:+|nuORF	98.58198989935565	0.0819402597096128	1				NaN	NaN	0	NaN	1670	3128	4799
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4801	18.93	NaN	10733	30	0	2981	0.106				-1	 	0	59	438.25052939996414	874.4865058667283	2	438.2506408691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	1671	3128	4799
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4802	18.932	NaN	701.76	30	0	38.904	0.106	+			32775	RARSAPAAAI	10	43	492.29079441509117	982.5670358969824	2	492.2906494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RARSAPAAAI_	ENSG00000134259|ENST00000369512|NGF;NGF|p.F113Sfs*45|1|0.22|ENSG00000134259|chr1:115286460-115286460|G/-|frameshift_variant;NGF|p.R49C|1|0.24|ENSG00000134259|chr1:115286651-115286651|G/A|missense_variant	52.936696900407355	0.4300801048568001	1				NaN	NaN	0	NaN	1672	3128	4799
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4803	18.934	NaN	597.05	30	0	69.284	0.033	+			35896	SEFGAKSK	8	42	427.2242736816406	NaN	0	427.2242736816406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SEFGAKSK_	ENSG00000182621|ENST00000338037|PLCB1;nc|ENSG00000182621|Q9NQ66-2|PLCB1;PLCB1|p.N466Ifs*79|1|0.15|ENSG00000182621|chr20:8717728-8717728|A/-|frameshift_variant;PLCB1|p.S523Ifs*5|1|0.33|ENSG00000182621|chr20:8722400-8722401|-/A|frameshift_variant	56.72105179125745	1.7418937515398478	1				NaN	NaN	0	NaN	1673	3128	4799
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4814	18.958	NaN	2068.8	30	0	793.55	0.214	+			24576	LGNSVLGHLEN	11	31	384.87164555426875	1151.5931072630062	3	385.2063903808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LGNSVLGHLEN_	ENSG00000131503|ENST00000360839|ANKHD1;ENST00000475148.1_1_5:139909227-139915158:+|nuORF;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	27.64392233501311	0.6998289966465058	1				NaN	NaN	0	NaN	1681	3131	4813
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4815	18.961	NaN	652.08	30	0	144.78	0.037			+	18038	IIPRPWSRP	9	34	561.33349609375	NaN	0	561.33349609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IIPRPWSRP_	REV__ENST00000460680.5_1_3:52441210-52441466:-|nuORF;REV__ENST00000483984.5_1_3:52440843-52441978:-|nuORF	30.503639358989545	0.3235605894931338	1				NaN	NaN	0	NaN	1682	3131	4813
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4828	18.989	NaN	3946.3	30	0	1210.4	0.214	+			22508	KTQAISISK	9	55	488.2949743485476	974.5753957638952	2	488.29486083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTQAISISK_	ENSG00000130787|ENST00000253083|HIP1R;ENST00000452196.6_1_12:123320097-123341792:+|nuORF;HIP1R|p.A781Pfs*24|1|0.19|ENSG00000130787|chr12:122859467-122859467|G/-|frameshift_variant;HIP1R|p.E1021Vfs*2|1|0.32|ENSG00000130787|chr12:122861412-122861445|AGAGGAGGTGGCCATCCGGCCCAGCACTGCCCCC/-|frameshift_variant;HIP1R|p.N345Mfs*4|3|0.29|ENSG00000130787|chr12:122855584-122855584|C/-|frameshift_variant;nc|ENSG00000130787|O75146-2|HIP1R	84.81729255234993	0.07947707105691067	1				NaN	NaN	0	NaN	1692	3134	4827
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4829	18.992	NaN	3476.5	30	0	534.62	0.106	+			16522	HEVKEAQTL	9	68	527.7796772042965	1053.544801475393	2	527.7803955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HEVKEAQTL_	ENSG00000127603|ENST00000564288|MACF1;MACF1|p.A5223Lfs*8|1|0.21|ENSG00000127603|chr1:39388486-39388486|G/-|frameshift_variant;MACF1|p.N4824Kfs*19|1|0.33|ENSG00000127603|chr1:39387292-39387293|-/A|frameshift_variant;MACF1|p.T4896Lfs*29|1|0.27|ENSG00000127603|chr1:39387507-39387507|A/-|frameshift_variant;nc|ENSG00000127603|Q9UPN3-2|MACF1;nc|ENSG00000127603|Q9UPN3-3|MACF1;nc|ENSG00000127603|Q9UPN3-4|MACF1;nc|ENSG00000127603|Q9UPN3-5|MACF1;nc|ENSG00000127603|Q9UPN3|MACF1	85.16082228582465	0.07850854922700509	1				NaN	NaN	0	NaN	1693	3134	4827
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4830	18.994	NaN	3809.6	30	0	572.35	0.106			+	25871	LSFNAKMELL	10	34	389.21587168856036	NaN	0	389.5498046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSFNAKMELL_	REV__HNRNPUL2|p.M589L|1|0.22|ENSG00000214753|chr11:62720038-62720038|T/G|missense_variant	35.15202426646627	0.38475398474706135	1				NaN	NaN	0	NaN	1694	3134	4827
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4831	18.996	NaN	2910.9	30	0	733.74	0.106				-1	 	0	63	516.3056848731186	515.2984084065185	1	516.308349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	1695	3134	4827
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4832	18.998	NaN	13022	30	0	4892.6	0.035				-1	 	0	64	514.7975230474452	1027.5804931616904	2	514.7984619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	1696	3134	4827
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4843	19.023	NaN	2873.8	30	0	774.94	0.214	+			26563	LTSSAPKT	8	55	402.72627738064	803.43800182808	2	402.7262268066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LTSSAPKT_	ENST00000550488.5_1_12:50044549-50044988:-|nuORF	58.78195531508484	0.5138399468736706	1				NaN	NaN	0	NaN	1704	3137	4842
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4844	19.027	NaN	665.85	30	0	102.53	0.036			+	36113	SEKMLQLMK	9	35	554.2992553710938	NaN	0	554.2992553710938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEKMLQLMK_	REV__tr|U7SWD3|U7SWD3_FUSNURadicalSAMcoredomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00986PE=4SV=1	42.396135135203025	0.2590952873412954	1				NaN	NaN	0	NaN	1705	3137	4842
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4856	19.052	NaN	50448	30	0	28511	0.214				-1	 	0	64	383.90421747776907	1148.6908230335073	3	383.90447998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	1714	3140	4855
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4857	19.056	NaN	1528.7	30	0	229.13	0.039			+	47905	VSLMIKLAKKQ	11	40	420.26854940368594	1257.7838188112578	3	420.268310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSLMIKLAKKQ_	REV__tr|U7SVY3|U7SVY3_FUSNUABCtransporterpermeaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01384PE=4SV=1	22.561587123415745	0.7531385481947795	1				NaN	NaN	0	NaN	1715	3140	4855
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4869	19.081	NaN	1584.7	30	0	263.93	0.214	+			22446	KTLEIQGK	8	54	458.77653642761203	NaN	0	458.77630615234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTLEIQGK_	ENSG00000172780|ENST00000315150|RAB43;ENST00000561790.1_1_16:46660318-46660894:-|nuORF;nc|ENSG00000172780|Q86YS6-2|RAB43	52.936696900407355	1.7418937515398478	1				NaN	NaN	0	NaN	1724	3143	4868
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4870	19.085	NaN	3211.5	30	0	455.62	0.106	+			23278	KYLGKNSK	8	54	469.27636130897605	936.5381696847521	2	469.276611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KYLGKNSK_	ENSG00000134588|ENST00000511190|USP26	45.9519527083369	0.6193794311207887	1				NaN	NaN	0	NaN	1725	3143	4868
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4871	19.087	NaN	917.61	30	0	254.45	0.106	+			9606	ELLSKKKIP	9	33	352.5655212402344	NaN	0	352.5655212402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ELLSKKKIP_	ENSG00000183495|ENST00000389561|EP400;EP400|p.L2071Rfs*37|1|0.23|ENSG00000183495|chr12:132043308-132043326|TCAAGAGTATTGAGTATCT/-|frameshift_variant;EP400|p.P2793Rfs*46|1|0.3|ENSG00000183495|chr12:132064707-132064707|C/-|frameshift_variant;EP400|p.Q1630Sfs*11|1|0.4|ENSG00000183495|chr12:132025670-132025670|C/-|frameshift_variant;nc|ENSG00000183495|Q96L91-3|EP400;nc|ENSG00000183495|Q96L91-4|EP400;nc|ENSG00000183495|Q96L91-5|EP400;nc|ENSG00000183495|Q96L91|EP400	30.317721548370564	0.32449924987115025	1				NaN	NaN	0	NaN	1726	3143	4868
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4872	19.089	NaN	1552.3	30	0	343.64	0.106	+			48261	VTDGPGNYK	9	49	475.73197247335844	949.4493920135169	2	475.7324523925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTDGPGNYK_	ATRN|p.P984Lfs*34|1|0.23|ENSG00000088812|chr20:3584079-3584079|C/-|frameshift_variant;ENSG00000088812|ENST00000262919|ATRN;nc|ENSG00000088812|O75882-2|ATRN;nc|ENSG00000088812|O75882-3|ATRN	51.19269402634007	0.2889735674168909	1				NaN	NaN	0	NaN	1727	3143	4868
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4873	19.09	NaN	3286.5	30	0	596.48	0.04				-1	 	0	58	445.23587941682865	444.22860295022866	1	445.5883483886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	1728	3143	4868
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4885	19.116	NaN	10977	30	0	1802.7	0.214	+			16445	HESRQITQV	9	78	549.2882010839252	1096.5618492346503	2	549.2889404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HESRQITQV_	ENSG00000104695|ENST00000221138|PPP2CB;ENSG00000113575|ENST00000481195|PPP2CA;ENSG00000119414|ENST00000373547|PPP6C;ENSG00000149923|ENST00000279387|PPP4C;ENST00000566749.5_1_16:30094185-30096380:+|nuORF;ENST00000567040.5_1_16:30087698-30094972:+|nuORF;nc|ENSG00000113575|P67775-2|PPP2CA;nc|ENSG00000119414|O00743-2|PPP6C;nc|ENSG00000119414|O00743-3|PPP6C	171.53180478179638	0.0025054460641941692	1				NaN	NaN	0	NaN	1737	3146	4884
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4886	19.119	NaN	3256.6	30	0	927.72	0.106	+			45162	TVMDKTRAL	9	53	525.783996030674	1049.5534391281478	2	525.7843627929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_TVM(Oxidation (M))DKTRAL_	CARD17-CASP1|1|fusion;CARD17-CASP1|2|fusion;CASP1|p.N205Ifs*7|1|0.4|ENSG00000137752|chr11:105030343-105030343|T/-|frameshift_variant;ENSG00000137752|ENST00000533400|CASP1;ENSG00000204397|ENST00000673097|CARD16;ENST00000526511.5_1_11:104901858-104905840:-|nuORF;ENST00000527065.1_1_11:104915107-104915377:-|nuORF;nc|ENSG00000137752|P29466-2|CASP1;nc|ENSG00000204397|Q5EG05|CARD16	61.691277971877994	0.19951612995419254	1				NaN	NaN	0	NaN	1738	3146	4884
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4887	19.121	NaN	1940.5	30	0	417.21	0.106	+			26025	LSLEVSRI	8	53	458.7759704589844	NaN	0	458.7759704589844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSLEVSRI_	BEND3|p.D265Tfs*54|3|0.29|ENSG00000178409|chr6:107070398-107070398|C/-|frameshift_variant;BEND3|p.E692Rfs*21|1|0.28|ENSG00000178409|chr6:107069117-107069118|-/G|frameshift_variant;ENSG00000178409|ENST00000369042|BEND3	49.44154591367651	1.7418937515398478	1				NaN	NaN	0	NaN	1739	3146	4884
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4888	19.123	NaN	1268	30	0	212.05	0.106	+			17706	IEMAILTAL	9	46	487.7837829589844	NaN	0	487.7837829589844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IEMAILTAL_	ENSG00000134160|ENST00000256552|TRPM1;ENST00000558070.1_1_15:31352716-31354937:-|nuORF;ENST00000560801.5_2_15:31320559-31354823:-|nuORF;nc|ENSG00000134160|Q7Z4N2-2|TRPM1;nc|ENSG00000134160|Q7Z4N2-3|TRPM1;nc|ENSG00000134160|Q7Z4N2-5|TRPM1;nc|ENSG00000134160|Q7Z4N2|TRPM1;TRPM1|p.Q811Tfs*12|1|0.28|ENSG00000134160|chr15:31037785-31037786|-/T|frameshift_variant;TRPM1|p.T760Pfs*110|2|0.19|ENSG00000134160|chr15:31038140-31038140|G/-|frameshift_variant	31.529811441608018	0.3183796599642538	1				NaN	NaN	0	NaN	1740	3146	4884
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4889	19.125	NaN	796.14	30	0	119.36	0.106				-1	SSPLTKCISL	10	35	369.2025451660156	NaN	0	369.2025451660156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_SSPLTKC(Carbamidomethyl (C))ISL_	AKAP13|p.S1688C|1|0.06|ENSG00000170776|chr15:85669792-85669792|C/G|missense_variant	33.921630207806714	0.38879399011744475	1				NaN	NaN	0	NaN	1741	3146	4884
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4890	19.127	NaN	2539.4	30	0	552.33	0.039				-1	MCSFSLLFLD	10	33	411.52947998046875	NaN	0	411.52947998046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_MC(Carbamidomethyl (C))SFSLLFLD_	ENSG00000168818|ENST00000306200|STX18;ENST00000503692.5_1_4:4421763-4421937:-|nuORF	33.921630207806714	0.38879399011744475	1				NaN	NaN	0	NaN	1742	3146	4884
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4904	19.156	NaN	14132	30	0	4368.3	0.214	+			35609	SCCPVGCAK	9	68	462.68952372493146	923.364494516663	2	462.6901550292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SCC(Carbamidomethyl (C))PVGCAK_	CON__P67983;ENSG00000125144|ENST00000379811|MT1G;ENSG00000125148|ENST00000245185|MT2A;ENSG00000169688|ENST00000334346|MT1B;ENSG00000187193|ENST00000394485|MT1X;ENSG00000205364|ENST00000379818|MT1M;ENST00000330439.6_1_16:56660742-56660880:+|nuORF;ENST00000562017.1_1_16:56643131-56643263:+|nuORF;ENST00000563985.1_1_16:56642884-56643263:+|nuORF;ENST00000567300.1_1_16:56642646-56643263:+|nuORF;nc|ENSG00000125144|P13640-2|MT1G;nc|ENSG00000169715|P04732|MT1E	71.87747018426188	0.13267044672804276	1				NaN	NaN	0	NaN	1753	3149	4903
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4905	19.159	NaN	3548.9	30	0	1068.5	0.106			+	33794	RQGQSSEIEV	10	63	566.7828402492188	1131.5511275652375	2	566.7832641601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RQGQSSEIEV_	REV__ENSG00000130684|ENST00000252979|ZNF337;REV__nc|ENSG00000130684|Q9Y3M9-2|ZNF337;REV__ZNF337|p.C518Lfs*33|1|0.34|ENSG00000130684|chr20:25675737-25675738|-/A|frameshift_variant	63.42647028704847	0.33467688528802414	1				NaN	NaN	0	NaN	1754	3149	4903
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4906	19.161	NaN	2099	30	0	406.39	0.033	+			32678	RAETVAKL	8	45	444.26889493708654	886.5232369409731	2	444.2689208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RAETVAKL_	ENSG00000177453|ENST00000326035|NIM1K	45.97224482568171	0.6192535143389125	1				NaN	NaN	0	NaN	1755	3149	4903
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4914	19.181	NaN	1361.2	30	0	246.19	0.214	+			2644	AQIWAFYE	8	52	514.2476867303492	NaN	0	514.2476196289062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AQIWAFYE_	DYNC2H1|p.F2761Lfs*20|1|0.09|ENSG00000187240|chr11:103203742-103203742|T/-|frameshift_variant;DYNC2H1|p.L4021Wfs*5|1|0.3|ENSG00000187240|chr11:103358262-103358262|T/-|frameshift_variant;DYNC2H1|p.P3966Hfs*44|1|0.22|ENSG00000187240|chr11:103321194-103321194|T/-|frameshift_variant;ENSG00000187240|ENST00000375735|DYNC2H1;nc|ENSG00000187240|Q8NCM8-2|DYNC2H1	33.51558372728122	1.7418937515398478	1				NaN	NaN	0	NaN	1760	3152	4913
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4915	19.185	NaN	1903.2	30	0	330.64	0.106	+			43115	TERDQNEKL	9	32	378.1910729631051	NaN	0	378.1915283203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TERDQNEKL_	ENSG00000103494|ENST00000647211|RPGRIP1L;nc|ENSG00000103494|Q68CZ1-2|RPGRIP1L;RPGRIP1L|p.D821*|1|0.35|ENSG00000103494|chr16:53645847-53645848|-/A|frameshift_variant	42.86426827375447	0.2558691296974908	1				NaN	NaN	0	NaN	1761	3152	4913
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4916	19.187	NaN	2231.5	30	0	982.4	0.106				-1	NNILHSIM	8	43	479.24450661526663	956.4744602973333	2	479.2440490722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_NNILHSIM(Oxidation (M))_	ENSG00000036473|ENST00000039007|OTC	52.29916861842294	0.578018602984656	1				NaN	NaN	0	NaN	1762	3152	4913
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4917	19.188	NaN	2707.2	30	0	521.5	0.106	+			44873	TTVKGGQAT	9	49	431.7358762731413	NaN	0	431.73565673828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TTVKGGQAT_	ASIC2|p.T213Qfs*32|1|0.35|ENSG00000108684|chr17:33111987-33111987|C/-|frameshift_variant	40.77816245573522	0.2702456086868081	1				NaN	NaN	0	NaN	1763	3152	4913
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4918	19.19	NaN	1222.8	30	0	239.98	0.032			+	49454	VVVVHATS	8	39	406.23670394789013	810.4588549625803	2	406.2369689941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVVVHATS_	REV__TAS1R2|p.R270H|1|0.26|ENSG00000179002|chr1:18854661-18854661|C/T|missense_variant	21.70233525837049	0.7917639344264583	1				NaN	NaN	0	NaN	1764	3152	4913
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4927	19.21	NaN	3660.6	30	0	2222	0.214	+			42513	TAPQAEHAM	9	53	478.2183295285431	954.4221061238862	2	478.2183837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAPQAEHAM_	CLUH|p.D1252Tfs*5|1|0.42|ENSG00000132361|chr17:2690771-2690771|T/-|frameshift_variant;CLUH|p.K974Rfs*21|1|0.3|ENSG00000132361|chr17:2694178-2694178|G/-|frameshift_variant;CLUH|p.P878Rfs*12|1|0.23|ENSG00000132361|chr17:2694959-2694959|G/-|frameshift_variant;ENSG00000132361|ENST00000651024|CLUH;nc|ENSG00000132361|O75153|CLUH	41.42661286455405	0.403525789677298	1				NaN	NaN	0	NaN	1770	3155	4926
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4928	19.214	NaN	2049.4	30	0	842.99	0.106	+			48096	VSTGSKDVVR	10	27	349.8650207519531	NaN	0	349.8650207519531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSTGSKDVVR_	ENSG00000149091|ENST00000456247|DGKZ;ENST00000528173.5_1_11:46400309-46400787:+|nuORF;ENST00000534802.1_1_11:46400234-46401494:+|nuORF;nc|ENSG00000149091|Q13574-1|DGKZ;nc|ENSG00000149091|Q13574-3|DGKZ;nc|ENSG00000149091|Q13574-4|DGKZ;nc|ENSG00000149091|Q13574-5|DGKZ;nc|ENSG00000149091|Q13574-6|DGKZ;nc|ENSG00000149091|Q13574-7|DGKZ	14.864876125193954	0.4201028297492154	1				NaN	NaN	0	NaN	1771	3155	4926
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4929	19.216	NaN	763.09	30	0	64.112	0.106	+			46432	VERSCWEA	8	45	490.2202740465086	978.4259951598173	2	490.2197570800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VERSCWEA_	ENST00000260743.9_1_10:105210904-105210991:-|nuORF;ENST00000369788.7_1_10:105210904-105212036:-|nuORF	31.954861631926434	0.7126016770032289	1				NaN	NaN	0	NaN	1772	3155	4926
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4930	19.218	NaN	896.97	30	0	263.77	0.037			+	16079	HCRFHHPIN	9	26	580.7798429223953	1159.5451329115906	2	580.78125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HCRFHHPIN_	REV__ENST00000479765.5_1_3:167339411-167344748:-|nuORF	12.206847966760668	0.6112419832031292	1				NaN	NaN	0	NaN	1773	3155	4926
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4939	19.239	NaN	25986	30	0	8877.1	0.214				-1	 	0	72	501.77310542550634	1001.5316579178127	2	501.77349853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	1779	3158	4938
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4940	19.243	NaN	4276	30	0	1403.8	0.106	+			2966	ASFDKAKLK	9	61	504.2978640655278	1006.5811751978556	2	504.2980041503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASFDKAKLK_	ENSG00000034510|ENST00000233143|TMSB10	101.25262130126117	0.03792372629710479	1				NaN	NaN	0	NaN	1780	3158	4938
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4941	19.245	NaN	1254.8	30	0	180.32	0.106	+			35531	SAVKEGTAM	9	49	447.22332763671875	NaN	0	447.22332763671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAVKEGTAM_	BICC1|p.I566Nfs*44|1|0.3|ENSG00000122870|chr10:58799216-58799217|-/A|frameshift_variant;BICC1|p.I566Sfs*5|1|0.57|ENSG00000122870|chr10:58799217-58799217|A/-|frameshift_variant;BICC1|p.P501Hfs*18|1|0.03|ENSG00000122870|chr10:58798530-58798530|C/-|frameshift_variant;ENSG00000122870|ENST00000373886|BICC1;nc|ENSG00000122870|Q9H694-2|BICC1	52.936696900407355	0.1864545979552969	1				NaN	NaN	0	NaN	1781	3158	4938
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4942	19.246	NaN	959.24	30	0	162.27	0.106			+	21703	KQHQYVTK	8	51	516.28742076364	NaN	0	516.2877197265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KQHQYVTK_	REV__CON__P02663	40.77816245573522	1.7418937515398478	1				NaN	NaN	0	NaN	1782	3158	4938
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4943	19.248	NaN	1083.8	30	0	321.35	0.106				-1	TPGSWEAFM	9	39	521.2209728104202	NaN	0	521.220703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_TPGSWEAFM(Oxidation (M))_	ENSG00000100109|ENST00000407690|TFIP11	31.954861631926434	0.3162336699109506	1				NaN	NaN	0	NaN	1783	3158	4938
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4944	19.25	NaN	1018.2	30	0	231.39	0.106			+	45966	VASTVWSL	8	45	431.7358762731413	NaN	0	431.7371826171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VASTVWSL_	REV__ENST00000553497.1_1_14:70082246-70082456:+|nuORF	40.5726180659479	1.7418937515398478	1				NaN	NaN	0	NaN	1784	3158	4938
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4945	19.252	NaN	1366.8	30	0	547.75	0.037			+	-1	SATLNSGMKR	10	25	360.8524688780408	1079.5355772343223	3	361.1867370605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_SATLNSGM(Oxidation (M))KR_	REV__ENSG00000178585|ENST00000377263|CTNNBIP1	29.170058357718403	0.6416167986984785	1				NaN	NaN	0	NaN	1785	3158	4938
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4957	19.278	NaN	43592	30	0	9932.1	0.214				-1	 	0	87	479.76346019991064	957.5123674666213	2	479.7635192871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	1794	3161	4956
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4958	19.281	NaN	14632	30	0	3762.9	0.106	+			5408	ATYHGSFSTK	10	67	549.7637870039506	1097.513021074701	2	549.764892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATYHGSFSTK_	ENSG00000163359|ENST00000295550|COL6A3;ENST00000491769.1_1_2:238233419-238250825:-|nuORF;ENST00000493608.1_1_2:238242084-238243404:-|nuORF;nc|ENSG00000163359|P12111-2|COL6A3;nc|ENSG00000163359|P12111-4|COL6A3	167.93327368760816	0.004342583126626421	1				NaN	NaN	0	NaN	1795	3161	4956
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4959	19.283	NaN	6710	30	0	2248.6	0.106	+			34573	RVMKALVNR	9	81	543.8312752639098	1085.6479975946195	2	543.8323364257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RVMKALVNR_	ENSG00000149136|ENST00000278412|SSRP1;ENST00000293880.9_1_11:57098199-57100416:-|nuORF	126.24258497203832	0.01742065577488747	1				NaN	NaN	0	NaN	1796	3161	4956
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4960	19.285	NaN	28611	30	0	3654.6	0.106	+			34574	RVMKALVNR	9	86	362.89012021790234	1085.648531253907	3	362.8902587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RVMKALVNR_	ENSG00000149136|ENST00000278412|SSRP1;ENST00000293880.9_1_11:57098199-57100416:-|nuORF	88.17693792209575	0.07000514020414955	1				NaN	NaN	0	NaN	1797	3161	4956
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4961	19.287	NaN	4262.4	30	0	685.52	0.106			+	8430	EAQVKRTL	8	53	472.7795940029783	943.5446350727566	2	472.7794189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EAQVKRTL_	REV__CLIP1|p.E992Lfs*32|1|0.2|ENSG00000130779|chr12:122328315-122328321|TGCTTCT/-|frameshift_variant;REV__CLIP1|p.M1151Wfs*8|1|0.31|ENSG00000130779|chr12:122316771-122316771|T/-|frameshift_variant;REV__ENSG00000130779|ENST00000620786|CLIP1;REV__nc|ENSG00000130779|P30622-1|CLIP1;REV__nc|ENSG00000130779|P30622-2|CLIP1	82.24051045832904	0.30490469762271794	1				NaN	NaN	0	NaN	1798	3161	4956
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4962	19.289	NaN	11645	30	0	3026	0.035			+	22594	KTTAKELQK	9	71	523.8133876288931	1045.6122223245861	2	523.8139038085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KTTAKELQK_	REV__tr|U7SMI0|U7SMI0_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01847PE=4SV=1	148.04295825190792	0.0073252839830139265	1				NaN	NaN	0	NaN	1799	3161	4956
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4963	19.289	NaN	4528	30	0	1212.4	0.14	+			22329	KTFTVQTTK	9	65	527.3003342226385	1052.586115512077	2	527.300537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KTFTVQTTK_	ENST00000395002.6_1_4:89744147-89744438:-|nuORF	142.36107225718385	0.009372392051035914	1				NaN	NaN	0	NaN	1800	3161	4956
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4977	19.321	NaN	1462.7	30	0	150.85	0.214			+	47567	VRGEGSIKV	9	39	472.7795940029783	943.5446350727566	2	472.7793273925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VRGEGSIKV_	REV__ENSG00000136068|ENST00000295956|FLNB;REV__ENST00000477629.1_1_3:58135593-58136214:+|nuORF;REV__ENST00000481470.5_1_3:58118395-58154450:+|nuORF;REV__nc|ENSG00000136068|O75369-2|FLNB;REV__nc|ENSG00000136068|O75369-4|FLNB;REV__nc|ENSG00000136068|O75369-5|FLNB;REV__nc|ENSG00000136068|O75369-7|FLNB;REV__nc|ENSG00000136068|O75369-8|FLNB;REV__nc|ENSG00000136068|O75369-9|FLNB	37.81151784470057	0.4459294069877048	1				NaN	NaN	0	NaN	1811	3164	4976
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4978	19.324	NaN	3990.3	30	0	748.52	0.106	+			16485	HETSKMKVL	9	66	536.7939290027599	1071.5733050723197	2	536.7952270507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HETSKMKVL_	ENSG00000067445|ENST00000173898|TRO;ENSG00000179222|ENST00000326587|MAGED1;ENST00000475183.1_1_X:54953428-54957230:+|nuORF;ENST00000492706.5_1_X:54953428-54957450:+|nuORF;ENST00000494718.5_1_X:51643260-51645023:+|nuORF;nc|ENSG00000067445|Q12816-2|TRO;nc|ENSG00000067445|Q12816-3|TRO;nc|ENSG00000067445|Q12816-4|TRO;nc|ENSG00000067445|Q12816-5|TRO;nc|ENSG00000179222|Q9Y5V3-2|MAGED1;TRO|p.S1034Rfs*10|1|0.07|ENSG00000067445|chrX:54929826-54929826|C/-|frameshift_variant	67.49366992349736	0.1516260258713357	1				NaN	NaN	0	NaN	1812	3164	4976
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4979	19.326	NaN	5882.8	30	0	1635.2	0.106			+	-1	VVIMVPRGAP	10	40	352.20726047026267	1053.599952010988	3	352.207275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_VVIM(Oxidation (M))VPRGAP_	REV__ENSG00000080224|ENST00000389672|EPHA6;REV__nc|ENSG00000080224|Q9UF33-2|EPHA6;REV__nc|ENSG00000080224|Q9UF33-3|EPHA6;REV__nc|ENSG00000080224|Q9UF33|EPHA6	36.446750945000026	0.5818864909973037	1				NaN	NaN	0	NaN	1813	3164	4976
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4980	19.328	NaN	5548	30	0	1352.2	0.106	+			5008	ATSAVTVTR	9	56	453.25589670641574	904.4972404796315	2	453.255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATSAVTVTR_	ENSG00000123444|ENST00000430070|KBTBD4;nc|ENSG00000123444|Q9NVX7-1|KBTBD4;nc|ENSG00000123444|Q9NVX7-3|KBTBD4	112.10723106719422	0.02684780151337622	1				NaN	NaN	0	NaN	1814	3164	4976
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4981	19.33	NaN	2122.3	30	0	366.53	0.106			+	4377	ATGVVLAGP	9	46	392.73153540245283	783.4485178717057	2	392.731689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATGVVLAGP_	REV__CIC|p.A785Pfs*139|1|0.34|ENSG00000079432|chr19:42291117-42291117|G/-|frameshift_variant;REV__CIC|p.E1288Gfs*56|1|0.3|ENSG00000079432|chr19:42293654-42293655|-/G|frameshift_variant;REV__CIC|p.P1248Hfs*54|3|0.34|ENSG00000079432|chr19:42293224-42293224|C/-|frameshift_variant;REV__CIC|p.P509Hfs*14|2|0.27|ENSG00000079432|chr19:42290289-42290289|C/-|frameshift_variant;REV__CIC|p.P518Rfs*5|2|0.37|ENSG00000079432|chr19:42290317-42290317|C/-|frameshift_variant;REV__CIC|p.T1217Nfs*6|1|0.23|ENSG00000079432|chr19:42293133-42293134|-/A|frameshift_variant;REV__ENSG00000079432|ENST00000681038|CIC	42.47446043378293	0.39123495718708534	1				NaN	NaN	0	NaN	1815	3164	4976
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4982	19.332	NaN	1027.8	30	0	121.29	0.034			+	47223	VMGPYPVR	8	46	459.7470397949219	NaN	0	459.7470397949219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VMGPYPVR_	REV__ENSG00000176105|ENST00000314574|YES1;REV__ENSG00000197122|ENST00000373578|SRC;REV__ENST00000418510.1_1_22:26044617-26045175:+|nuORF;REV__ENST00000477066.5_1_20:36025122-36031779:+|nuORF;REV__nc|ENSG00000197122|P12931-2|SRC;REV__nc|ENSG00000197122|P12931-3|SRC	42.47446043378293	1.7418937515398478	1				NaN	NaN	0	NaN	1816	3164	4976
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4983	19.332	NaN	4188.6	30	0	2065	0.142			+	33324	RGSIRKQR	8	36	334.2095845845786	999.6069243539357	3	334.2095642089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RGSIRKQR_	REV__ENSG00000197261|ENST00000529246|C6orf141;REV__ENST00000424426.1_1_6:49518739-49519689:+|nuORF	30.503639358989545	0.7238069182250283	1				NaN	NaN	0	NaN	1817	3164	4976
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4995	19.359	NaN	4181.8	30	0	371.54	0.214				-1	 	0	68	466.2816680447316	930.5487831562632	2	466.2817077636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	1826	3167	4994
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4996	19.363	NaN	2510.9	30	0	297.01	0.034	+			853	AEGTAQQRL	9	53	487.25609836103325	972.4976437888665	2	487.25604248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEGTAQQRL_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	87.69643885390035	0.07135982304947239	1				NaN	NaN	0	NaN	1827	3167	4994
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5007	19.388	NaN	18032	30	0	5300.2	0.214	+			48908	VVDNGSGMCK	10	70	505.22511816548814	1008.4356833977763	2	505.2255554199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVDNGSGMCK_	ACTBL2|p.R29Gfs*7|1|0.37|ENSG00000169067|chr5:57482623-57482623|G/-|frameshift_variant;ENSG00000075624|ENST00000646664|ACTB;ENSG00000169067|ENST00000423391|ACTBL2;ENST00000418351.1_1_15:44282253-44282364:-|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000477812.1_1_7:5569027-5569288:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF	139.38205640894643	0.010918844784185366	1				NaN	NaN	0	NaN	1835	3170	5006
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5008	19.392	NaN	2423.1	30	0	264.28	0.106	+			35814	SEAREKAVL	9	49	501.78054770946784	1001.5465424857357	2	501.7815856933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEAREKAVL_	ENSG00000076944|ENST00000221283|STXBP2;ENST00000594221.5_1_19:7706941-7707474:+|nuORF;nc|ENSG00000076944|Q15833-2|STXBP2;nc|ENSG00000076944|Q15833-3|STXBP2	45.97224482568171	0.3502073465782774	1				NaN	NaN	0	NaN	1836	3170	5006
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5009	19.394	NaN	951.89	30	0	123.46	0.106			+	7724	DLSKLTKNK	9	49	523.8133876288931	1045.6122223245861	2	524.7466430664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DLSKLTKNK_	REV__ENSG00000179709|ENST00000291971|NLRP8;REV__nc|ENSG00000179709|Q86W28-2|NLRP8;REV__NLRP8|p.F1005Sfs*20|1|0.05|ENSG00000179709|chr19:55979528-55979528|C/-|frameshift_variant	26.69291269510374	0.5537881896960711	1				NaN	NaN	0	NaN	1837	3170	5006
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5010	19.396	NaN	2002.8	30	0	1250.8	0.106			+	289	AAPDASWR	8	39	437.21551844556296	872.416483957926	2	437.21539306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AAPDASWR_	REV__ENSG00000182095|ENST00000430969|TNRC18;REV__nc|ENSG00000182095|O15417-2|TNRC18;REV__TNRC18|p.G2106Vfs*3|1|0.33|ENSG00000182095|chr7:5324339-5324339|C/-|frameshift_variant;REV__TNRC18|p.R1595Gfs*18|1|0.42|ENSG00000182095|chr7:5359449-5359449|C/-|frameshift_variant;REV__TNRC18|p.R1786Gfs*3|1|0.14|ENSG00000182095|chr7:5351933-5351933|G/-|frameshift_variant	27.882242232435846	0.7440473649773525	1				NaN	NaN	0	NaN	1838	3170	5006
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5011	19.398	NaN	1092.4	30	0	135.3	0.033	+			23547	LAKSSGSAL	9	48	417.2399733757481	NaN	0	417.2397155761719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LAKSSGSAL_	ENSG00000104522|ENST00000425753|GFUS;ENST00000531473.5_1_8:144695082-144696778:-|nuORF	54.776311868738084	0.17377682019723872	1				NaN	NaN	0	NaN	1839	3170	5006
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5023	19.423	NaN	2991.6	30	0	241.42	0.214	+			42976	TEKGKDVEL	9	64	509.7748642873301	1017.5351756414602	2	509.77435302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEKGKDVEL_	nc|ENSG00000211714|A0A075B6L6|TRBV7-3;nc|ENSG00000282939|A0A1B0GXF2|TRBV7-2	62.107414245175825	0.1960472003779324	1				NaN	NaN	0	NaN	1848	3173	5022
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5024	19.426	NaN	1661.9	30	0	567.86	0.032			+	26192	LSRTAGPT	8	41	401.72433542754794	NaN	0	401.7244567871094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSRTAGPT_	REV__ENSG00000166278|ENST00000299367|C2	30.503639358989545	1.7418937515398478	1				NaN	NaN	0	NaN	1849	3173	5022
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5035	19.452	NaN	1058.8	30	0	84.461	0.214	+			29455	PCLYVYNK	8	51	500.2507767495714	NaN	0	500.2503662109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PCLYVYNK_	ENSG00000108591|ENST00000225729|DRG2;ENST00000467099.6_1_17:18003545-18010551:+|nuORF	46.76643321282427	1.7418937515398478	1				NaN	NaN	0	NaN	1857	3176	5034
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5036	19.455	NaN	1453.2	30	0	219.77	0.106	+			3357	ASNLHALAH	9	52	467.2481241547928	NaN	0	467.2481384277344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASNLHALAH_	ENSG00000152518|ENST00000282388|ZFP36L2;ZFP36L2|p.E103Gfs*23|2|0.66|ENSG00000152518|chr2:43225498-43225499|-/T|frameshift_variant;ZFP36L2|p.F119Ifs*7|1|0.3|ENSG00000152518|chr2:43225449-43225450|-/T|frameshift_variant;ZFP36L2|p.F162Sfs*314|1|0.37|ENSG00000152518|chr2:43225319-43225320|-/AGGGCCG|frameshift_variant;ZFP36L2|p.G144Afs*43|5|0.19|ENSG00000152518|chr2:43225373-43225373|C/-|frameshift_variant;ZFP36L2|p.G145Rfs*329|1|0.41|ENSG00000152518|chr2:43225372-43225373|-/C|frameshift_variant;ZFP36L2|p.H201Pfs*259|1|0.56|ENSG00000152518|chr2:43225199-43225202|GTAT/-|frameshift_variant;ZFP36L2|p.I215Hfs*259|1|0.31|ENSG00000152518|chr2:43225162-43225163|-/A|frameshift_variant;ZFP36L2|p.K173Vfs*300|1|0.38|ENSG00000152518|chr2:43225286-43225287|TT/-|frameshift_variant;ZFP36L2|p.Q138Afs*336|1|0.38|ENSG00000152518|chr2:43225393-43225394|-/A|frameshift_variant;ZFP36L2|p.S151Yfs*323|1|0.23|ENSG00000152518|chr2:43225352-43225353|-/T|frameshift_variant;ZFP36L2|p.S89Gfs*11|1|0.44|ENSG00000152518|chr2:43225532-43225539|GCCGCGCT/-|frameshift_variant;ZFP36L2|p.Y98Lfs*86|1|0.3|ENSG00000152518|chr2:43225502-43225511|AGGGTGCCGT/-|frameshift_variant;ZFP36L2|p.Y98Rfs*4|1|0.14|ENSG00000152518|chr2:43225512-43225513|AG/-|frameshift_variant	47.657333605630114	0.2228375344433429	1				NaN	NaN	0	NaN	1858	3176	5034
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5037	19.457	NaN	2083.7	30	0	383.58	0.106			+	37429	SLGVSLGVAAV	11	50	486.78944368086525	971.5643344285305	2	486.7893371582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLGVSLGVAAV_	REV__ENSG00000261272|ENST00000561890|MUC22	54.776311868738084	0.3700837260462177	1				NaN	NaN	0	NaN	1859	3176	5034
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5038	19.459	NaN	789.52	30	0	157.41	0.034	+			1430	AEYGPQGRA	9	37	474.7305924098367	947.4466318864734	2	474.7304992675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEYGPQGRA_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	40.77816245573522	0.41113185337114944	1				NaN	NaN	0	NaN	1860	3176	5034
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5049	19.484	NaN	9720.9	30	0	2774.3	0.214	+			40414	STVGTSNLK	9	55	453.7482574277484	905.4819619222968	2	453.7484130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STVGTSNLK_	ENSG00000135111|ENST00000349155|TBX3;nc|ENSG00000135111|O15119-3|TBX3;nc|ENSG00000135111|O15119|TBX3;TBX3|p.K714Rfs*15|1|0.12|ENSG00000135111|chr12:114671931-114671932|TT/-|frameshift_variant;TBX3|p.S443Afs*194|1|1.0|ENSG00000135111|chr12:114674609-114674610|-/ATGGTGGCGGGGCT|frameshift_variant	141.52041321563706	0.009766778904176347	1				NaN	NaN	0	NaN	1868	3179	5048
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5050	19.488	NaN	3113.8	30	0	879.04	0.035	+			20628	KGFVSTIIR	9	61	510.81393383169774	1019.6133147301955	2	510.8142395019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KGFVSTIIR_	ENSG00000168038|ENST00000301831|ULK4	42.86426827375447	0.38666266728046506	1				NaN	NaN	0	NaN	1869	3179	5048
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5061	19.513	NaN	5125.2	30	0	1495	0.215	+			39520	STFRESFKK	9	58	377.2047392120422	1128.5923882363268	3	377.2049560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STFRESFKK_	ENSG00000067066|ENST00000340126|SP100;nc|ENSG00000067066|P23497-2|SP100;nc|ENSG00000067066|P23497-3|SP100;nc|ENSG00000067066|P23497-5|SP100;nc|ENSG00000067066|P23497-6|SP100;nc|ENSG00000067066|P23497-7|SP100;nc|ENSG00000067066|P23497|SP100	41.42661286455405	0.403525789677298	1				NaN	NaN	0	NaN	1877	3182	5060
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5062	19.517	NaN	1019.4	30	0	148.29	0.106			+	31569	QLPNVGSSFT	10	42	525.2663970562472	1048.5182411792944	2	525.2672729492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QLPNVGSSFT_	REV__nc|ENSG00000139865|Q86TZ1-2|TTC6	37.81151784470057	0.569310847604193	1				NaN	NaN	0	NaN	1878	3182	5060
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5063	19.519	NaN	989.16	30	0	154.92	0.106				-1	SCCWQGAL	8	36	462.68952372493146	923.364494516663	2	462.6896057128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SCC(Carbamidomethyl (C))WQGAL_	ENST00000498611.5_1_22:50657800-50659866:-|nuORF	33.51558372728122	0.7005509609380386	1				NaN	NaN	0	NaN	1879	3182	5060
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5064	19.52	NaN	1004.5	30	0	253.58	0.033	+			38484	SSATKVPPA	9	43	429.2401428222656	NaN	0	429.2401428222656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSATKVPPA_	ENSG00000021762|ENST00000263650|OSBPL5;ENST00000465323.1_1_11:3143079-3150378:-|nuORF;ENST00000477622.1_1_11:3143079-3147843:-|nuORF;ENST00000534491.5_1_11:3114755-3187956:-|nuORF;nc|ENSG00000021762|Q9H0X9-2|OSBPL5;nc|ENSG00000021762|Q9H0X9-3|OSBPL5;OSBPL5|p.D516Mfs*10|1|0.05|ENSG00000021762|chr11:3100233-3100234|-/AT|frameshift_variant;OSBPL5|p.Y76C|1|0.14|ENSG00000021762|chr11:3122421-3122421|T/C|missense_variant	49.44154591367651	0.21054156626303966	1				NaN	NaN	0	NaN	1880	3182	5060
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5075	19.546	NaN	5585.9	30	0	879.37	0.215			+	509	ACKCLSGSTI	10	70	520.2492373147401	1038.48392169628	2	520.250244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_AC(Carbamidomethyl (C))KCLSGSTI_	REV__OLFML2B|p.S113L|1|0.2|ENSG00000162745|chr1:162020019-162020019|G/A|missense_variant	95.81516180277367	0.09778090853194907	1				NaN	NaN	0	NaN	1888	3185	5074
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5076	19.549	NaN	4657.6	30	0	645.83	0.106	+			527	ADAARLPGAL	10	62	477.77186341775433	NaN	0	477.7718811035156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ADAARLPGAL_	ENST00000355468.7_2_17:39967757-39967826:-|nuORF	40.5726180659479	0.36520375954238715	1				NaN	NaN	0	NaN	1889	3185	5074
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5077	19.551	NaN	3521.5	30	0	1229.4	0.106	+			3679	ASYVASTKYQK	11	46	415.887451171875	NaN	0	415.887451171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASYVASTKYQK_	ENSG00000044115|ENST00000302763|CTNNA1;ENSG00000066032|ENST00000402739|CTNNA2;ENST00000522792.1_1_5:138268134-138269775:+|nuORF;nc|ENSG00000044115|P35221-2|CTNNA1;nc|ENSG00000044115|P35221-3|CTNNA1;nc|ENSG00000066032|P26232-2|CTNNA2;nc|ENSG00000066032|P26232-3|CTNNA2;nc|ENSG00000066032|P26232-4|CTNNA2;nc|ENSG00000066032|P26232-5|CTNNA2;nc|ENSG00000066032|P26232-6|CTNNA2	27.64392233501311	0.4422187622456888	1				NaN	NaN	0	NaN	1890	3185	5074
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5078	19.553	NaN	2502.8	30	0	248.68	0.106	+			31066	QFAAKLIQ	8	70	459.77197679213907	NaN	0	459.77227783203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QFAAKLIQ_	ENSG00000197694|ENST00000372739|SPTAN1;nc|ENSG00000197694|Q13813-3|SPTAN1;nc|ENSG00000197694|Q13813|SPTAN1;SPTAN1|p.T595Lfs*44|1|0.28|ENSG00000197694|chr9:128582823-128582823|A/-|frameshift_variant	47.91560031466742	1.7418937515398478	1				NaN	NaN	0	NaN	1891	3185	5074
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5079	19.555	NaN	1407.6	30	0	109.53	0.106			+	30593	QAQDHKGGP	9	47	469.2282442733828	936.4419356135656	2	469.2284851074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QAQDHKGGP_	REV__ENST00000474879.6_3_22:50941400-50941703:-|nuORF	30.503639358989545	0.5181749237905803	1				NaN	NaN	0	NaN	1892	3185	5074
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5080	19.556	NaN	5316.3	30	0	2204.1	0.034	+			48885	VVDENAVAK	9	49	472.7562191900457	943.4978854468915	2	472.7563781738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VVDENAVAK_	ADH1B|p.A318Lfs*29|1|0.06|ENSG00000196616|chr4:99311533-99311533|C/-|frameshift_variant;ENSG00000187758|ENST00000209668|ADH1A;ENSG00000196616|ENST00000305046|ADH1B;ENSG00000248144|ENST00000515683|ADH1C;nc|ENSG00000196616|P00325-2|ADH1B	104.0567914643314	0.03506238181059741	1				NaN	NaN	0	NaN	1893	3185	5074
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5081	19.557	NaN	569.25	30	0	67.598	0.14			+	25578	LQETIHASV	9	41	499.2695233174109	NaN	0	499.2455749511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LQETIHASV_	REV__ENSG00000170638|ENST00000380909|TRABD;REV__ENST00000463233.1_1_22:50624392-50636456:+|nuORF;REV__ENST00000472677.1_1_22:50635456-50635792:+|nuORF;REV__nc|ENSG00000170638|Q9H4I3-2|TRABD	30.317721548370564	0.32449924987115025	1				NaN	NaN	0	NaN	1894	3185	5074
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5095	19.588	NaN	4670.5	30	0	1146.3	0.214	+			12645	GEIKIHKM	8	59	478.2736846128598	954.5328162925197	2	478.2738037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEIKIHKM_	ENSG00000050405|ENST00000341247|LIMA1;ENST00000552045.1_1_12:50589526-50594661:-|nuORF;LIMA1|p.T536Lfs*38|2|0.4|ENSG00000050405|chr12:50177739-50177739|G/-|frameshift_variant;nc|ENSG00000050405|Q9UHB6-2|LIMA1;nc|ENSG00000050405|Q9UHB6-4|LIMA1;nc|ENSG00000050405|Q9UHB6-5|LIMA1	82.30502934623384	0.30436709589983096	1				NaN	NaN	0	NaN	1905	3188	5094
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5096	19.591	NaN	6773.3	30	0	2120.5	0.106	+			16804	HPDKKIVAY	9	70	535.8033931069516	1069.592233280703	2	535.8046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HPDKKIVAY_	ATXN10|p.F455Lfs*10|1|0.3|ENSG00000130638|chr22:45843115-45843115|T/-|frameshift_variant;ENSG00000130638|ENST00000252934|ATXN10;nc|ENSG00000130638|Q9UBB4-2|ATXN10	114.8945686534367	0.024290463251177924	1				NaN	NaN	0	NaN	1906	3188	5094
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5097	19.593	NaN	8328.6	30	0	2359.1	0.106			+	13015	GEVHLWIGY	9	58	358.5184437626258	1072.5335018880774	3	358.5186462402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEVHLWIGY_	REV__ENSG00000179889|ENST00000396410|PDXDC1;REV__ENST00000530079.5_1_16:70030360-70072929:-|nuORF;REV__ENST00000531894.5_1_16:70030360-70099817:-|nuORF;REV__ENST00000570001.5_1_16:15069056-15125764:+|nuORF;REV__nc|ENSG00000179889|Q6P996-2|PDXDC1;REV__nc|ENSG00000179889|Q6P996-3|PDXDC1;REV__nc|ENSG00000179889|Q6P996-4|PDXDC1;REV__nc|ENSG00000179889|Q6P996-5|PDXDC1;REV__nc|ENSG00000255185|Q6P474|PDXDC2P;REV__PDXDC1|p.P706Tfs*3|1|0.06|ENSG00000179889|chr16:15036023-15036024|-/A|frameshift_variant	26.69291269510374	0.5537881896960711	1				NaN	NaN	0	NaN	1907	3188	5094
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5098	19.595	NaN	3394.4	30	0	1139.5	0.106	+			2967	ASFDKAKLK	9	52	504.2978640655278	1006.5811751978556	2	504.2985534667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASFDKAKLK_	ENSG00000034510|ENST00000233143|TMSB10	71.87747018426188	0.13267044672804276	1				NaN	NaN	0	NaN	1908	3188	5094
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5099	19.597	NaN	3605.8	30	0	1242.5	0.106	+			21498	KNLGKEAKP	9	62	492.7957246012339	983.5768962692679	2	492.796142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KNLGKEAKP_	BCAS1|p.E250Kfs*31|1|0.06|ENSG00000064787|chr20:53996027-53996027|T/-|frameshift_variant;BCAS1|p.G267Afs*16|1|0.05|ENSG00000064787|chr20:53995974-53995975|-/TATTG|frameshift_variant;BCAS1|p.K304Rfs*49|1|0.32|ENSG00000064787|chr20:53995028-53995028|T/-|frameshift_variant;ENSG00000064787|ENST00000688948|BCAS1;nc|ENSG00000064787|O75363-2|BCAS1;nc|ENSG00000064787|O75363|BCAS1	51.19269402634007	0.2889735674168909	1				NaN	NaN	0	NaN	1909	3188	5094
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5100	19.599	NaN	1775.8	30	0	803.48	0.106	+			4319	ATGKVMVMK	9	47	482.7697558488302	NaN	0	482.7700500488281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATGKVMVMK_	ENSG00000182541|ENST00000331728|LIMK2;LIMK2|p.G411Afs*3|1|0.4|ENSG00000182541|chr22:31267874-31267874|G/-|frameshift_variant;LIMK2|p.K351T|1|0.32|ENSG00000182541|chr22:31266994-31266994|A/C|missense_variant;nc|ENSG00000182541|P53671-2|LIMK2;nc|ENSG00000182541|P53671-3|LIMK2	65.46538089061403	0.1260090208616529	1				NaN	NaN	0	NaN	1910	3188	5094
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5101	19.601	NaN	941.66	30	0	177.25	0.033				-1	LPQSMLFRADH	11	32	444.2242431640625	NaN	0	444.2242431640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_LPQSM(Oxidation (M))LFRADH_	SERPINB7|p.T353M|1|0.15|ENSG00000166396|chr18:63804550-63804550|C/T|missense_variant	31.068146907933308	0.4269584437765198	1				NaN	NaN	0	NaN	1911	3188	5094
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5111	19.622	NaN	2239.7	30	0	260.19	0.214	+			38964	SSRGPLPVK	9	45	470.78243864571414	939.5503243582283	2	470.7822570800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSRGPLPVK_	ENSG00000147274|ENST00000320676|RBMX;ENSG00000213516|ENST00000652648|RBMXL1;nc|ENSG00000147274|P38159-2|RBMX	29.170058357718403	0.5306379469863586	1				NaN	NaN	0	NaN	1918	3191	5110
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5112	19.626	NaN	8699.2	30	0	1919.3	0.106	+			16805	HPDKKIVAY	9	64	357.5378217584217	1069.5916358754653	3	357.5377502441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HPDKKIVAY_	ATXN10|p.F455Lfs*10|1|0.3|ENSG00000130638|chr22:45843115-45843115|T/-|frameshift_variant;ENSG00000130638|ENST00000252934|ATXN10;nc|ENSG00000130638|Q9UBB4-2|ATXN10	34.172542307311794	0.4838870758800184	1				NaN	NaN	0	NaN	1919	3191	5110
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5113	19.628	NaN	7612.3	30	0	945.27	0.106	+			42916	TEIEKARAV	9	66	508.78990777377754	1015.5652626143551	2	508.7907409667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TEIEKARAV_	ENSG00000148843|ENST00000369797|PDCD11	126.24258497203832	0.01742065577488747	1				NaN	NaN	0	NaN	1920	3191	5110
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5114	19.63	NaN	4384.9	30	0	851.25	0.037	+			40355	STTRLYLRK	9	50	379.89591572522056	1136.6659177758618	3	379.896240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STTRLYLRK_	ENSG00000051180|ENST00000267868|RAD51;nc|ENSG00000051180|Q06609-2|RAD51;nc|ENSG00000051180|Q06609-4|RAD51	49.536043120802724	0.308405419312776	1				NaN	NaN	0	NaN	1921	3191	5110
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5126	19.655	NaN	1489	30	0	538.41	0.214	+			15053	GTNSVICSK	9	40	454.7288447174338	NaN	0	454.72882080078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTNSVICSK_	ENSG00000102738|ENST00000323563|MRPS31	72.2432373244024	0.09796301979040985	1				NaN	NaN	0	NaN	1930	3194	5125
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5127	19.659	NaN	1297	30	0	172.54	0.106	+			15911	HAASNPPAQY	10	45	528.2484658451231	1054.482378757046	2	528.248779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HAASNPPAQY_	CEACAM6|p.S270T|1|0.25|ENSG00000086548|chr19:41762073-41762073|T/A|missense_variant;ENSG00000086548|ENST00000199764|CEACAM6;ENSG00000105388|ENST00000221992|CEACAM5;ENSG00000105388|ENST00000221992|CEACAM5;nc|ENSG00000105388|P06731-2|CEACAM5;nc|ENSG00000105388|P06731-2|CEACAM5	46.45678178249821	0.4896490706773647	1				NaN	NaN	0	NaN	1931	3194	5125
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5128	19.661	NaN	3749.2	30	0	673.56	0.106	+			19770	KEAETRAEF	9	67	540.7700789807822	NaN	0	540.7701416015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEAETRAEF_	CON__Q3SX28;ENSG00000140416|ENST00000403994|TPM1;ENSG00000143549|ENST00000651641|TPM3;ENSG00000167460|ENST00000643579|TPM4;ENSG00000198467|ENST00000645482|TPM2;ENST00000368528.3_1_3:27674554-27675208:+|nuORF;ENST00000397772.2_1_20:32500135-32500381:-|nuORF;ENST00000469717.5_1_1:154130117-154143232:-|nuORF;ENST00000520239.1_1_8:70042334-70042577:+|nuORF;ENST00000558264.5_1_15:63353458-63363368:+|nuORF;ENST00000559108.1_1_15:63354467-63358183:+|nuORF;nc|ENSG00000140416|P09493-10|TPM1;nc|ENSG00000140416|P09493-2|TPM1;nc|ENSG00000140416|P09493-3|TPM1;nc|ENSG00000140416|P09493-4|TPM1;nc|ENSG00000140416|P09493-5|TPM1;nc|ENSG00000140416|P09493-6|TPM1;nc|ENSG00000140416|P09493-7|TPM1;nc|ENSG00000140416|P09493-8|TPM1;nc|ENSG00000140416|P09493-9|TPM1;nc|ENSG00000143549|P06753-2|TPM3;nc|ENSG00000143549|P06753-3|TPM3;nc|ENSG00000143549|P06753-4|TPM3;nc|ENSG00000143549|P06753-5|TPM3;nc|ENSG00000143549|P06753-6|TPM3;nc|ENSG00000143549|P06753-7|TPM3;nc|ENSG00000167460|P67936-2|TPM4;nc|ENSG00000198467|P07951-2|TPM2;nc|ENSG00000198467|P07951-3|TPM2;TPM3|p.A243T|1|0.29|ENSG00000143549|chr1:154170448-154170448|C/T|missense_variant	78.26377905018397	0.07733306720594871	1				NaN	NaN	0	NaN	1932	3194	5125
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5129	19.663	NaN	1881.1	30	0	358.06	0.106			+	125	AAGAAMAAGLA	11	49	437.7259184398953	873.4372839465906	2	437.72650146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AAGAAMAAGLA_	REV__ENSG00000196475|ENST00000358842|GK2;REV__ENSG00000198814|ENST00000427190|GK;REV__ENSG00000229894|ENST00000505354|GK3;REV__GK2|p.F535Lfs*2|1|0.08|ENSG00000196475|chr4:79406596-79406596|A/-|frameshift_variant;REV__nc|ENSG00000198814|P32189-1|GK;REV__nc|ENSG00000198814|P32189-2|GK;REV__nc|ENSG00000198814|P32189-4|GK	50.0245360154114	0.4207767895280948	1				NaN	NaN	0	NaN	1933	3194	5125
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5130	19.665	NaN	2295.8	30	0	469.99	0.106	+			30087	PQRFDFVVSI	10	48	403.2219748232608	NaN	0	402.8868103027344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PQRFDFVVSI_	ENSG00000164010|ENST00000372517|ERMAP	49.536043120802724	0.30853568297719935	1				NaN	NaN	0	NaN	1934	3194	5125
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5131	19.666	NaN	1081.5	30	0	100.73	0.106	+			3351	ASNFKSPVK	9	45	489.27421395212764	976.5338749710553	2	489.275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASNFKSPVK_	ENSG00000204435|ENST00000375882|CSNK2B	66.96192283764107	0.15557981141143568	1				NaN	NaN	0	NaN	1935	3194	5125
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5132	19.668	NaN	1157.8	30	0	200.21	0.034	+			2691	AQNTVICSK	9	46	482.24966338831524	962.4847738434305	2	482.2497863769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AQNTVICSK_	ENSG00000119888|ENST00000263735|EPCAM;ENST00000474691.1_1_2:47596644-47600714:+|nuORF	74.1650062923329	0.12277912660386392	1				NaN	NaN	0	NaN	1936	3194	5125
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5142	19.69	NaN	7759.1	30	0	820.82	0.214	+			12390	GEAAKSVKL	9	66	451.7688079002115	901.5230628672231	2	451.7685852050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEAAKSVKL_	ENSG00000189334|ENST00000344616|S100A14	101.45984612302182	0.0377122763612125	1				NaN	NaN	0	NaN	1943	3197	5141
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5143	19.694	NaN	5452.4	30	0	1554.7	0.106	+			44647	TTGAVLGQK	9	58	437.75315365080127	873.4917543684026	2	437.7527770996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTGAVLGQK_	chr3:58640177-58645509|101|32.06|0.87|5.2|-|2|FAM3D,FAM3D|2;ENSG00000198643|ENST00000358781|FAM3D;FAM3D|p.G139Vfs*16|1|0.28|ENSG00000198643|chr3:58637183-58637183|C/-|frameshift_variant	93.19546047674547	0.05585629608842056	1				NaN	NaN	0	NaN	1944	3197	5141
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5144	19.696	NaN	1351.7	30	0	236.45	0.106				-1	VGLKYLPI	8	43	472.7923583984375	NaN	0	472.7923583984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))VGLKYLPI_	ENST00000556036.5_2_14:45605266-45605320:+|nuORF	35.200714571348534	1.7418937515398478	1				NaN	NaN	0	NaN	1945	3197	5141
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5145	19.697	NaN	1246.5	30	0	425.36	0.106	+			4336	ATGNTVVMK	9	50	460.74765629528673	NaN	0	460.7477722167969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATGNTVVMK_	ALDH1B1|p.L216Sfs*20|1|0.21|ENSG00000137124|chr9:38396389-38396389|C/-|frameshift_variant;ALDH1B1|p.V362Gfs*6|1|0.35|ENSG00000137124|chr9:38396832-38396833|GT/-|frameshift_variant;ENSG00000137124|ENST00000377698|ALDH1B1	42.86426827375447	0.2558691296974908	1				NaN	NaN	0	NaN	1946	3197	5141
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5146	19.699	NaN	4093.2	30	0	834.93	0.04			+	7497	DGKLVRELYLQ	11	62	445.25443144150415	NaN	0	445.2541809082031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DGKLVRELYLQ_	REV__ENSG00000138071|ENST00000260641|ACTR2;REV__nc|ENSG00000138071|P61160-2|ACTR2	28.5767321226876	0.4380616241468488	1				NaN	NaN	0	NaN	1947	3197	5141
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5158	19.725	NaN	25185	30	0	18392	0.214			+	32315	QTRLIISHK	9	48	365.89251434801355	1094.6557136442407	3	365.8928527832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QTRLIISHK_	REV__ENSG00000134775|ENST00000590592|FHOD3;REV__ENST00000589114.5_1_18:33877702-34289359:+|nuORF;REV__FHOD3|p.D280Rfs*29|1|0.35|ENSG00000134775|chr18:36611973-36611974|-/A|frameshift_variant;REV__FHOD3|p.E810Rfs*8|2|0.26|ENSG00000134775|chr18:36718298-36718298|G/-|frameshift_variant;REV__FHOD3|p.P335Qfs*63|1|0.19|ENSG00000134775|chr18:36625553-36625554|CC/-|frameshift_variant;REV__FHOD3|p.S336Vfs*138|7|0.27|ENSG00000134775|chr18:36625553-36625553|C/-|frameshift_variant;REV__nc|ENSG00000134775|Q2V2M9-2|FHOD3;REV__nc|ENSG00000134775|Q2V2M9-3|FHOD3;REV__nc|ENSG00000134775|Q2V2M9|FHOD3	38.80614096846853	0.43426287593479557	1				NaN	NaN	0	NaN	1956	3200	5157
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5159	19.728	NaN	1792.4	30	0	309.73	0.106			+	12373	GDSERHGR	8	47	457.2164106436643	912.4182683541286	2	457.2161865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GDSERHGR_	REV__ENST00000316292.13_1_6:74229958-74230393:-|nuORF	30.503639358989545	0.7238069182250283	1				NaN	NaN	0	NaN	1957	3200	5157
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5160	19.73	NaN	1572.6	30	0	418.41	0.033	+			38618	SSGVPNPPK	9	43	441.7375028532406	881.4604527732812	2	441.7373352050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSGVPNPPK_	ENSG00000115207|ENST00000264720|GTF3C2	42.396135135203025	0.392153681582562	1				NaN	NaN	0	NaN	1958	3200	5157
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5173	19.757	NaN	9667.8	30	0	4829	0.214	+			42613	TATPLSHA	8	44	399.21094503442464	796.4073371356493	2	399.2113952636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TATPLSHA_	ENSG00000163788|ENST00000296088|SNRK	40.5726180659479	0.6527593143185008	1				NaN	NaN	0	NaN	1968	3203	5172
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5174	19.761	NaN	4009.2	30	0	1063	0.036	+			20560	KFRKYILQ	8	64	548.3352134736324	1094.6558740140647	2	548.336669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KFRKYILQ_	ENSG00000183813|ENST00000330953|CCR4	44.116797842482775	0.6307669463330267	1				NaN	NaN	0	NaN	1969	3203	5172
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5186	19.787	NaN	6122.9	30	0	2411.8	0.214	+			49009	VVGPVGAGK	9	52	392.2395060158615	782.464459098523	2	392.23980712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVGPVGAGK_	ABCC4|p.L883Wfs*7|2|0.22|ENSG00000125257|chr13:95083178-95083178|A/-|frameshift_variant;ABCC4|p.T775Rfs*21|1|0.09|ENSG00000125257|chr13:95161322-95161323|-/AGTATGTCTT|frameshift_variant;ABCC6|p.L780Wfs*31|1|0.44|ENSG00000091262|chr16:16178875-16178875|G/-|frameshift_variant;ENSG00000091262|ENST00000205557|ABCC6;ENSG00000125257|ENST00000645237|ABCC4;nc|ENSG00000091262|O95255-3|ABCC6;nc|ENSG00000125257|O15439-2|ABCC4;nc|ENSG00000125257|O15439-3|ABCC4;nc|ENSG00000125257|O15439-4|ABCC4	40.5726180659479	0.4135428067754104	1				NaN	NaN	0	NaN	1978	3206	5185
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5187	19.79	NaN	3265.6	30	0	542.19	0.106	+			15935	HAFESSQKY	9	68	548.7561662336957	1095.4977795341913	2	548.7572021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HAFESSQKY_	ENSG00000100027|ENST00000339468|YPEL1;ENSG00000175155|ENST00000312655|YPEL2;ENST00000477675.1_1_22:22055420-22058252:-|nuORF;YPEL1|p.E102A|1|0.07|ENSG00000100027|chr22:21701184-21701184|T/G|missense_variant	113.41158876095287	0.025516849225023126	1				NaN	NaN	0	NaN	1979	3206	5185
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5188	19.792	NaN	9480.7	30	0	4596.9	0.106	+			22191	KSTELLIRK	9	61	363.23242976081247	1086.6754598826374	3	363.2325744628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KSTELLIRK_	ENSG00000132475|ENST00000254810|H3-3B;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000168148|ENST00000366696|H3-4;ENSG00000183598|ENST00000331491|H3C13;ENSG00000188375|ENST00000340398|H3-5;ENSG00000197153|ENST00000359303|H3C12;ENSG00000197409|ENST00000356476|H3C4;ENSG00000203811|ENST00000369158|H3C14;ENSG00000203852|ENST00000403683|H3C15;ENSG00000273983|ENST00000614378|H3C8;ENSG00000274750|ENST00000614911|H3C6;ENSG00000275379|ENST00000616365|H3C11;ENSG00000275714|ENST00000613854|H3C1;ENSG00000277775|ENST00000618052|H3C7;ENSG00000278828|ENST00000685041|H3C10;ENST00000401004.2_1:120904811-120905087:+|nuORF;ENST00000586518.1_1_17:73774674-73775034:-|nuORF;nc|ENSG00000273213|Q5TEC6|H3-7	69.6276240434122	0.14239879520340665	1				NaN	NaN	0	NaN	1980	3206	5185
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5189	19.794	NaN	1121.4	30	0	155.76	0.106	+			23175	KWKPSIKN	8	47	500.7987788855757	NaN	0	500.7987060546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KWKPSIKN_	ENST00000441719.5_1_2:86683622-86683685:+|nuORF	63.30626980617807	1.7418937515398478	1				NaN	NaN	0	NaN	1981	3206	5185
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5190	19.796	NaN	3683.9	30	0	799.48	0.106	+			22192	KSTELLIRK	9	73	544.34504861447	1086.6755442957399	2	544.3455810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KSTELLIRK_	ENSG00000132475|ENST00000254810|H3-3B;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000168148|ENST00000366696|H3-4;ENSG00000183598|ENST00000331491|H3C13;ENSG00000188375|ENST00000340398|H3-5;ENSG00000197153|ENST00000359303|H3C12;ENSG00000197409|ENST00000356476|H3C4;ENSG00000203811|ENST00000369158|H3C14;ENSG00000203852|ENST00000403683|H3C15;ENSG00000273983|ENST00000614378|H3C8;ENSG00000274750|ENST00000614911|H3C6;ENSG00000275379|ENST00000616365|H3C11;ENSG00000275714|ENST00000613854|H3C1;ENSG00000277775|ENST00000618052|H3C7;ENSG00000278828|ENST00000685041|H3C10;ENST00000401004.2_1:120904811-120905087:+|nuORF;ENST00000586518.1_1_17:73774674-73775034:-|nuORF;nc|ENSG00000273213|Q5TEC6|H3-7	78.26377905018397	0.10505600812668463	1				NaN	NaN	0	NaN	1982	3206	5185
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5191	19.798	NaN	857.47	30	0	118.78	0.035	+			3408	ASQHSGALFK	10	40	523.2755611480835	NaN	0	523.2745361328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASQHSGALFK_	ENSG00000173166|ENST00000319170|RAPH1;RAPH1|p.K1026Qfs*47|1|0.27|ENSG00000173166|chr2:203440114-203440115|-/G|frameshift_variant	30.568863376406313	0.39980281766270914	1				NaN	NaN	0	NaN	1983	3206	5185
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5200	19.819	NaN	11742	30	0	3167.7	0.214	+			39598	STHGTFLNK	9	64	502.7611517100492	1003.5077504868984	2	502.7615051269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STHGTFLNK_	ENSG00000163798|ENST00000326019|SLC4A1AP;nc|ENSG00000163798|Q9BWU0-1|SLC4A1AP;SLC4A1AP|p.F378Lfs*8|1|0.18|ENSG00000163798|chr2:27667375-27667375|T/-|frameshift_variant;SLC4A1AP|p.L669Tfs*8|1|0.38|ENSG00000163798|chr2:27685159-27685160|-/A|frameshift_variant	82.7504851949679	0.08565546331141553	1				NaN	NaN	0	NaN	1989	3209	5199
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5201	19.823	NaN	4870.8	30	0	545.16	0.106	+			35823	SEDAEKKVL	9	64	509.77475200472526	NaN	0	509.77484130859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEDAEKKVL_	ENSG00000060138|ENST00000228251|YBX3;ENST00000566722.1_1_16:31580383-31580761:-|nuORF;nc|ENSG00000060138|P16989-2|YBX3;nc|ENSG00000060138|P16989-3|YBX3	124.08010499294276	0.0015010289275841425	1				NaN	NaN	0	NaN	1990	3209	5199
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5202	19.825	NaN	11419	30	0	2861.6	0.036	+			39830	STLKSIMKK	9	70	345.87890590406425	1034.6148883123928	3	345.8793640136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STLKSIMKK_	ENSG00000107104|ENST00000382297|KANK1;ENST00000354485.5_1_9:730997-731267:+|nuORF;ENST00000489369.5_1_9:676972-732786:+|nuORF;nc|ENSG00000107104|Q14678-2|KANK1	68.84614121027924	0.14577793175421136	1				NaN	NaN	0	NaN	1991	3209	5199
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5210	19.844	NaN	20118	30	0	6806.8	0.214	+			39599	STHGTFLNK	9	79	335.50993396083163	1003.5079724826949	3	335.5101318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STHGTFLNK_	ENSG00000163798|ENST00000326019|SLC4A1AP;nc|ENSG00000163798|Q9BWU0-1|SLC4A1AP;SLC4A1AP|p.F378Lfs*8|1|0.18|ENSG00000163798|chr2:27667375-27667375|T/-|frameshift_variant;SLC4A1AP|p.L669Tfs*8|1|0.38|ENSG00000163798|chr2:27685159-27685160|-/A|frameshift_variant	51.33545320467046	0.2872990594074956	1				NaN	NaN	0	NaN	1996	3212	5209
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5211	19.848	NaN	3550.8	30	0	899.12	0.106	+			25783	LSAPATPSPG	10	53	449.2372293693235	896.459905805447	2	449.23736572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSAPATPSPG_	ENST00000446546.2_1_10:75545483-75546011:+|nuORF	56.72105179125745	0.3956618550748046	1				NaN	NaN	0	NaN	1997	3212	5209
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5212	19.85	NaN	2900.8	30	0	269.95	0.106				-1	RVKTLAMDT	9	53	350.85807857819475	NaN	0	350.5245666503906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_RVKTLAM(Oxidation (M))DT_	ENSG00000113552|ENST00000311337|GNPDA1;ENST00000507559.1_1_5:141384487-141385853:-|nuORF;nc|ENSG00000113552|P46926-2|GNPDA1	30.317721548370564	0.32449924987115025	1				NaN	NaN	0	NaN	1998	3212	5209
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5213	19.852	NaN	2005.8	30	0	399.94	0.106	+			27052	MADENKNEY	9	63	557.2290315422978	1112.4435101513955	2	557.229736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MADENKNEY_	ENSG00000137942|ENST00000271234|FNBP1L;FNBP1L|p.T313Pfs*3|1|0.22|ENSG00000137942|chr1:93534852-93534852|A/-|frameshift_variant;nc|ENSG00000137942|Q5T0N5-2|FNBP1L;nc|ENSG00000137942|Q5T0N5-3|FNBP1L;nc|ENSG00000137942|Q5T0N5-4|FNBP1L;nc|ENSG00000137942|Q5T0N5-5|FNBP1L	76.16968421966216	0.11411088698345859	1				NaN	NaN	0	NaN	1999	3212	5209
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5214	19.854	NaN	1218.8	30	0	112	0.106			+	28597	NKNIVYTTP	9	55	525.2831437318184	1048.5517345304368	2	525.785888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NKNIVYTTP_	REV__tr|U7SJJ7|U7SJJ7_FUSNUThioredoxindomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02188PE=4SV=1	36.446750945000026	0.4619375763483977	1				NaN	NaN	0	NaN	2000	3212	5209
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5215	19.855	NaN	3028.6	30	0	659.71	0.037			+	25547	LPVGGPTVRKP	11	61	374.23254986984887	1119.6758202097467	3	374.5671081542969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LPVGGPTVRKP_	REV__ENST00000490470.5_1_3:133407133-133426371:+|nuORF	36.31764250033197	0.6083289427130232	1				NaN	NaN	0	NaN	2001	3212	5209
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5216	19.856	NaN	649.98	30	0	62.316	0.14	+			9195	EGQTNLHLL	9	38	512.7742309570312	NaN	0	512.7742309570312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EGQTNLHLL_	nc|ENSG00000155657|Q8WZ42-6|TTN	47.95952297671804	0.22075498469600283	1				NaN	NaN	0	NaN	2002	3212	5209
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5228	19.883	NaN	24293	30	0	6993.9	0.214	+			1243	AERPGEAAV	9	69	450.23242823760927	898.4503035420186	2	450.23236083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AERPGEAAV_	ENSG00000277443|ENST00000612661|MARCKS	67.49366992349736	0.1516260258713357	1				NaN	NaN	0	NaN	2011	3215	5227
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5229	19.887	NaN	1445.2	30	0	151.86	0.106			+	1644	AGPLAPKGP	9	49	404.2392780676254	806.4640032020508	2	404.239501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AGPLAPKGP_	REV__ENSG00000141858|ENST00000533683|SAMD1;REV__nc|ENSG00000141858|Q6SPF0|SAMD1	40.5726180659479	0.4135428067754104	1				NaN	NaN	0	NaN	2012	3215	5227
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5230	19.889	NaN	4362.3	30	0	3005.5	0.106	+			5585	AVATKFVNK	9	24	326.53065622869525	NaN	0	326.5306396484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVATKFVNK_	ENSG00000038382|ENST00000344204|TRIO;ENST00000508717.1_1_5:14498631-14508016:+|nuORF;nc|ENSG00000038382|O75962-2|TRIO;nc|ENSG00000038382|O75962-3|TRIO;nc|ENSG00000038382|O75962-4|TRIO	24.20275056022122	0.35506675290109213	1				NaN	NaN	0	NaN	2013	3215	5227
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5231	19.891	NaN	2521	30	0	1509.9	0.106				-1	AATEHDTMLE	10	40	567.2436695226932	1132.4727861121862	2	567.2443237304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_AATEHDTM(Oxidation (M))LE_	ENSG00000029534|ENST00000289734|ANK1;ENST00000524227.5_1_8:41525962-41555361:-|nuORF;KIAA0146-ANK1|1|fusion;KIAA0146-ANK1|2|fusion;KIAA0146-ANK1|3|fusion;KIAA0146-ANK1|4|fusion;nc|ENSG00000029534|P16157-10|ANK1;nc|ENSG00000029534|P16157-12|ANK1;nc|ENSG00000029534|P16157-14|ANK1;nc|ENSG00000029534|P16157-16|ANK1;nc|ENSG00000029534|P16157-21|ANK1;nc|ENSG00000029534|P16157-5|ANK1;nc|ENSG00000029534|P16157-8|ANK1;nc|ENSG00000029534|P16157|ANK1	34.172542307311794	0.6007644933930345	1				NaN	NaN	0	NaN	2014	3215	5227
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5232	19.893	NaN	14918	30	0	1910.3	0.106				-1	 	0	69	610.2725108702215	1827.7957032108643	3	610.2736206054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	2015	3215	5227
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5233	19.894	NaN	1512.7	30	0	238.28	0.033	+			7290	DARGFRGV	8	50	439.23433008842346	876.454107243647	2	439.2344055175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DARGFRGV_	ENST00000527295.5_1_11:405898-406649:-|nuORF	33.51558372728122	0.7005509609380386	1				NaN	NaN	0	NaN	2016	3215	5227
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5234	19.895	NaN	1337.9	30	0	184.29	0.141			+	16980	HPRAGGHALR	10	54	536.3000778846896	NaN	0	536.2993774414062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HPRAGGHALR_	REV__ENSG00000176472|ENST00000314228|ZNF575	53.08895987439943	0.2860736266326207	1				NaN	NaN	0	NaN	2017	3215	5227
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5246	19.922	NaN	13728	30	0	2522.7	0.214	+			27629	MPQGGGQHY	9	73	487.7108525556729	973.4071521781458	2	487.7109069824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MPQGGGQHY_	ENSG00000141380|ENST00000415083|SS18;nc|ENSG00000141380|Q15532-2|SS18	133.4690685054315	0.013543987435668854	1				NaN	NaN	0	NaN	2026	3218	5245
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5247	19.926	NaN	4616	30	0	1591.4	0.106	+			12371	GDRNKRKK	8	37	334.537702663559	1000.591278590877	3	334.5377197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GDRNKRKK_	ENSG00000203963|ENST00000684719|C1orf141	26.79610172149135	0.7524337208463756	1				NaN	NaN	0	NaN	2027	3218	5245
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5248	19.928	NaN	1367.8	30	0	302.89	0.106				-1	VIDNGSGMCK	10	54	540.744445711739	1079.474338490278	2	540.7455444335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_VIDNGSGMC(Carbamidomethyl (C))K_	ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196604|ENST00000409914|POTEF;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000204434|Q9BYX7|POTEKP;POTEE|p.N792Kfs*34|1|0.2|ENSG00000188219|chr2:131263828-131263829|-/A|frameshift_variant;POTEF|p.R728Gfs*16|3|0.06|ENSG00000196604|chr2:130075290-130075290|G/-|frameshift_variant	56.43379154798735	0.3982744522255666	1				NaN	NaN	0	NaN	2028	3218	5245
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5249	19.929	NaN	11048	30	0	4862.1	0.106	+			3939	ATATELTTK	9	62	468.2555601321832	934.4965673311664	2	468.2558288574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATATELTTK_	ENSG00000133606|ENST00000255977|MKRN1;ENST00000475010.5_1_7:140155450-140179030:-|nuORF;nc|ENSG00000133606|Q9UHC7-2|MKRN1;nc|ENSG00000133606|Q9UHC7-3|MKRN1;nc|ENSG00000133606|Q9UHC7-4|MKRN1;nc|ENSG00000238222|Q13434|MKRN4P	159.27591364854348	0.004707062175358555	1				NaN	NaN	0	NaN	2029	3218	5245
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5250	19.931	NaN	983.93	30	0	256.02	0.106			+	-1	CGNNTMMI	8	39	478.68481147503826	955.3550700168765	2	478.68524169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C),Oxidation (M)	_C(Carbamidomethyl (C))GNNTMM(Oxidation (M))I_	REV__tr|U7T8A2|U7T8A2_FUSNU1,4-dihydroxy-2-naphthoateoctaprenyltransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00172PE=4SV=1	23.04248740728303	0.7814162927298575	1				NaN	NaN	0	NaN	2030	3218	5245
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5251	19.933	NaN	1075.8	30	0	244	0.106	+			7855	DQVGFIPGM	9	47	482.2320556640625	NaN	0	482.2320556640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DQVGFIPGM_	L1PA3_dup1115|chr2:110017555-110020014:+|1.763195504976095|0.4680770941019235|1.91|454.0|61|3|sense;L1PA3_dup1120|chr2:110351377-110353837:-|1.852683732690941|0.4358200479832063|2.09|470.0|66|3|sense;L1PA3_dup1321|chr2:173527290-173533317:-|1.892281258594111|0.2637255971055219|2.84|482.0|35|1|sense;nc|ENSG999|O00370|L1_ORF2	38.80614096846853	0.28164298475537564	1				NaN	NaN	0	NaN	2031	3218	5245
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5252	19.935	NaN	619.32	30	0	146.66	0.038	+			34614	RVPVEKPVYK	10	31	607.8654174804688	NaN	0	607.8654174804688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RVPVEKPVYK_	ENSG00000184428|ENST00000329245|TOP1MT;nc|ENSG00000184428|Q969P6-2|TOP1MT	37.59989570853033	0.37671638597750867	1				NaN	NaN	0	NaN	2032	3218	5245
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5261	19.957	NaN	3088.7	30	0	721.42	0.214	+			2968	ASFDKAKLK	9	52	504.2978640655278	1006.5811751978556	2	504.29803466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASFDKAKLK_	ENSG00000034510|ENST00000233143|TMSB10	120.8684288430529	0.02067403653475984	1				NaN	NaN	0	NaN	2038	3221	5260
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5262	19.96	NaN	3404	30	0	955.89	0.106	+			38605	SSGPSTPLK	9	62	437.2371044457634	872.4596559583268	2	437.2373352050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSGPSTPLK_	C2CD5|p.D676Mfs*40|1|0.33|ENSG00000111731|chr12:22474769-22474769|T/-|frameshift_variant;C2CD5|p.F331Lfs*5|1|0.32|ENSG00000111731|chr12:22513345-22513345|C/-|frameshift_variant;ENSG00000111731|ENST00000446597|C2CD5;nc|ENSG00000111731|Q86YS7|C2CD5	52.936696900407355	0.27249468807391813	1				NaN	NaN	0	NaN	2039	3221	5260
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5263	19.962	NaN	1544	30	0	288.52	0.106			+	46758	VGSSIGASTK	10	42	453.7475667686244	905.4805806040488	2	453.7477722167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VGSSIGASTK_	REV__BRWD1|p.R1901Kfs*6|1|0.34|ENSG00000185658|chr21:39197367-39197368|-/T|frameshift_variant;REV__ENSG00000185658|ENST00000342449|BRWD1;REV__nc|ENSG00000185658|Q9NSI6-3|BRWD1;REV__nc|ENSG00000185658|Q9NSI6|BRWD1	42.86426827375447	0.522752283233888	1				NaN	NaN	0	NaN	2040	3221	5260
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5264	19.964	NaN	1242.9	30	0	291.72	0.106	+			33698	RPDRSRAA	8	40	464.7586317787956	927.5027106243912	2	464.7582092285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RPDRSRAA_	ENST00000507229.5_1_1:1551767-1563881:+|nuORF;ENST00000511502.5_1_1:1550926-1563560:+|nuORF	30.503639358989545	0.7238069182250283	1				NaN	NaN	0	NaN	2041	3221	5260
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5265	19.966	NaN	1005.6	30	0	173.19	0.034	+			48184	VTAEEVLR	8	36	458.758303337376	NaN	0	458.7577819824219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTAEEVLR_	ENSG00000181234|ENST00000435159|TMEM132C;TMEM132C|p.D986Mfs*13|1|0.27|ENSG00000181234|chr12:128705920-128705920|G/-|frameshift_variant	24.20275056022122	1.7418937515398478	1				NaN	NaN	0	NaN	2042	3221	5260
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5276	19.991	NaN	2643.6	30	0	337.77	0.144	+			42002	SVYKEAIQK	9	70	533.3002875729234	1064.5860222126466	2	533.30029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVYKEAIQK_	ENSG00000179104|ENST00000321196|TMTC2;ENST00000551915.5_1_12:83081308-83379891:+|nuORF;TMTC2|p.A737Qfs*4|1|0.25|ENSG00000179104|chr12:83050953-83050953|A/-|frameshift_variant	106.68306549817024	0.032382560583716295	1				NaN	NaN	0	NaN	2050	3224	5275
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5286	20.016	NaN	9497.5	30	0	4856.7	0.214			+	48949	VVETVVEEYS	10	41	385.19217268076846	1152.5546886425054	3	385.1925048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVETVVEEYS_	REV__ENST00000395797.1_1_10:44140239-44144057:-|nuORF;REV__ENST00000485351.1_1_10:44141510-44141681:-|nuORF	17.468008924990375	0.7276870902328821	1				NaN	NaN	0	NaN	2057	3227	5285
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5287	20.02	NaN	7005.5	30	0	709.32	0.106	+			34715	RVVMEQQLKK	10	73	425.5795275913805	1273.7167533743416	3	425.5796203613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_RVVM(Oxidation (M))EQQLKK_	ENSG00000198825|ENST00000650623|INPP5F;INPP5F|p.A917Qfs*71|1|0.07|ENSG00000198825|chr10:119827129-119827130|-/CAGAGTG|frameshift_variant	72.87924865735499	0.25379688738724415	1				NaN	NaN	0	NaN	2058	3227	5285
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5288	20.022	NaN	2624.7	30	0	284.22	0.106	+			42466	TAMNGNLAK	9	59	460.2367594521707	918.4589659711414	2	460.2369689941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TAMNGNLAK_	ENSG00000184675|ENST00000374869|AMER1	60.97194046774394	0.20551255781574032	1				NaN	NaN	0	NaN	2059	3227	5285
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5289	20.024	NaN	1061.3	30	0	69.18	0.106			+	-1	VTAMWPKTE	9	49	539.7670330419176	1077.519513150635	2	539.3028564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_VTAM(Oxidation (M))WPKTE_	REV__ENST00000354293.9_1_19:50270301-50285308:+|nuORF	40.77816245573522	0.41113185337114944	1				NaN	NaN	0	NaN	2060	3227	5285
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5290	20.026	NaN	1945.9	30	0	593.19	0.106			+	7484	DGEAKKPL	8	50	429.2400015673273	856.4654502014546	2	429.2402648925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DGEAKKPL_	REV__ENSG00000124659|ENST00000372876|TBCC;REV__TBCC|p.N313Efs*4|1|0.2|ENSG00000124659|chr6:42745130-42745137|CAGTTATT/-|frameshift_variant	44.116797842482775	0.6307669463330267	1				NaN	NaN	0	NaN	2061	3227	5285
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5291	20.027	NaN	1327.1	30	0	167.15	0.035	+			1123	AELPLPPSPT	10	48	511.2810271698705	1020.5475014065411	2	511.7855224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AELPLPPSPT_	EIF4G3|p.A945Qfs*16|1|0.25|ENSG00000075151|chr1:20864482-20864482|T/-|frameshift_variant;EIF4G3|p.F1258Lfs*2|1|0.43|ENSG00000075151|chr1:20840975-20840975|A/-|frameshift_variant;EIF4G3|p.I1064Nfs*6|1|0.32|ENSG00000075151|chr1:20855052-20855053|-/T|frameshift_variant;EIF4G3|p.V564*|2|0.22|ENSG00000075151|chr1:20899839-20899839|T/-|frameshift_variant;ENSG00000075151|ENST00000602326|EIF4G3;nc|ENSG00000075151|O43432-2|EIF4G3;nc|ENSG00000075151|O43432-3|EIF4G3;nc|ENSG00000075151|O43432|EIF4G3	47.657333605630114	0.47858658696240314	1				NaN	NaN	0	NaN	2062	3227	5285
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5292	20.028	NaN	1217.6	30	0	146	0.138			+	50172	WLEKGQELQL	10	42	415.229547618753	NaN	0	415.2294616699219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_WLEKGQELQL_	REV__ENSG00000196946|ENST00000396570|ZNF705A;REV__ENSG00000215343|ENST00000400085|ZNF705D;REV__ENSG00000215356|ENST00000400120|ZNF705B;REV__ENSG00000215372|ENST00000400156|ZNF705G;REV__nc|ENSG00000214534|A8MWA4|ZNF705EP	36.31764250033197	0.3809266711384728	1				NaN	NaN	0	NaN	2063	3227	5285
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5301	20.051	NaN	6290.4	30	0	955.29	0.214	+			1650	AGPLRKSSL	9	64	464.78198665416977	927.5494203751396	2	464.78192138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AGPLRKSSL_	ENSG00000089820|ENST00000350060|ARHGAP4;ENST00000404127.6_1_X:153173185-153186849:-|nuORF;ENST00000460782.1_1_X:153186028-153186838:-|nuORF;nc|ENSG00000089820|P98171-2|ARHGAP4	74.25504064058377	0.12238981753128622	1				NaN	NaN	0	NaN	2069	3230	5300
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5302	20.055	NaN	6316.3	30	0	2222	0.106	+			16972	HPQQKVAVY	9	65	535.2932075620945	1068.571862190989	2	535.2931518554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HPQQKVAVY_	ENSG00000102871|ENST00000345057|TRADD;ENST00000566104.1_1_16:67189803-67193780:-|nuORF	118.74307786436346	0.02196067127630568	1				NaN	NaN	0	NaN	2070	3230	5300
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5303	20.057	NaN	3510.4	30	0	298.5	0.106	+			16186	HEAQHGVTSL	10	68	539.7670330419176	1077.519513150635	2	539.7673950195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HEAQHGVTSL_	ENSG00000100105|ENST00000266269|PATZ1;nc|ENSG00000100105|Q9HBE1-2|PATZ1;nc|ENSG00000100105|Q9HBE1-3|PATZ1;nc|ENSG00000100105|Q9HBE1-4|PATZ1	101.45984612302182	0.07336148045341315	1				NaN	NaN	0	NaN	2071	3230	5300
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5304	20.059	NaN	5254	30	0	1209.1	0.106	+			25632	LQQVSLSQ	8	63	451.7507335965101	901.4869142598202	2	451.7503356933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LQQVSLSQ_	nc|ENSG00000167920|Q8N816-2|KRT10-AS1;nc|ENSG00000167920|Q8N816|KRT10-AS1	56.72105179125745	0.5342425954139568	1				NaN	NaN	0	NaN	2072	3230	5300
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5305	20.06	NaN	1610.8	30	0	189.34	0.106			+	2346	AMTSRTKE	8	47	462.2341391973158	922.4537254614316	2	462.2340393066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AMTSRTKE_	REV__ENST00000576058.2_1_16:13552215-13552527:+|nuORF	51.19269402634007	0.5868595481438337	1				NaN	NaN	0	NaN	2073	3230	5300
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5306	20.062	NaN	2071	30	0	721.67	0.106	+			35430	SASASLPTK	9	49	431.23745821012125	860.4603634870425	2	431.2369384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SASASLPTK_	ENSG00000141568|ENST00000335255|FOXK2;ENST00000473637.6_1_17:80553997-80559372:+|nuORF;ENST00000529652.1_1_17:80558017-80559372:+|nuORF;ENST00000571989.1_1_17:80551586-80559372:+|nuORF	78.26377905018397	0.10505600812668463	1				NaN	NaN	0	NaN	2074	3230	5300
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5307	20.064	NaN	4423.7	30	0	874.65	0.035			+	17987	IHRCFIHL	8	55	519.7879406377642	1037.5613283423284	2	519.7885131835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IHRCFIHL_	REV__ENST00000529652.1_1_17:80551717-80553973:+|nuORF	60.29395666154354	0.49887135096048313	1				NaN	NaN	0	NaN	2075	3230	5300
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5318	20.088	NaN	3196	30	0	820	0.214	+			38619	SSGVPNPPK	9	44	441.7375028532406	881.4604527732812	2	441.73785400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSGVPNPPK_	ENSG00000115207|ENST00000264720|GTF3C2	69.6276240434122	0.14239879520340665	1				NaN	NaN	0	NaN	2083	3233	5317
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5319	20.091	NaN	1018.1	30	0	143.77	0.106			+	37539	SLLSTYALGP	10	33	511.2810271698705	1020.5475014065411	2	511.2804870605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLLSTYALGP_	REV__ENSG00000183114|ENST00000332947|FAM43B	27.882242232435846	0.6521336255503853	1				NaN	NaN	0	NaN	2084	3233	5317
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5320	20.093	NaN	8121.8	30	0	2283.9	0.106			+	-1	IIKWMEFL	8	51	365.8694396951623	1094.586489685687	3	365.8697509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_IIKWM(Oxidation (M))EFL_	REV__ENSG00000135900|ENST00000258383|MRPL44	38.80614096846853	0.6637206697844082	1				NaN	NaN	0	NaN	2085	3233	5317
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5321	20.095	NaN	2396	30	0	496.85	0.106	+			3880	ATAQAVAPPR	10	55	491.2775179195166	980.5404829058332	2	491.2777404785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATAQAVAPPR_	ENST00000609438.1_1_4:90171359-90228902:-|nuORF	88.17693792209575	0.14151128060301246	1				NaN	NaN	0	NaN	2086	3233	5317
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5322	20.097	NaN	1405.4	30	0	125.98	0.036			+	44094	TPTPSASGATY	11	62	526.7480714353245	1051.481589937449	2	526.7481689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TPTPSASGATY_	REV__ENSG00000138688|ENST00000679879|BLTP1;REV__KIAA1109-FSIP2|1|fusion;REV__nc|ENSG00000138688|Q2LD37-2|BLTP1;REV__nc|ENSG00000138688|Q2LD37-4|BLTP1;REV__nc|ENSG00000138688|Q2LD37-6|BLTP1;REV__nc|ENSG00000138688|Q2LD37-7|BLTP1;REV__nc|ENSG00000138688|Q2LD37|BLTP1	54.776311868738084	0.3700837260462177	1				NaN	NaN	0	NaN	2087	3233	5317
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5333	20.122	NaN	17312	30	0	3116.6	0.214			+	16865	HPGGWSDF	8	71	451.693257475756	901.371962018312	2	451.69293212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HPGGWSDF_	REV__ENSG00000149328|ENST00000535456|GLB1L2;REV__ENST00000529077.5_1_11:134236970-134242406:+|nuORF	65.89745868150666	0.44339748671293633	1				NaN	NaN	0	NaN	2095	3236	5332
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5334	20.126	NaN	2244.5	30	0	433.91	0.106	+			15453	GTYVKPLSNK	10	57	553.8137970213136	1105.613041109427	2	553.8142700195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTYVKPLSNK_	ACOX1|p.N501Tfs*6|1|0.47|ENSG00000161533|chr17:75949577-75949577|T/-|frameshift_variant;ENSG00000161533|ENST00000293217|ACOX1;ENST00000589744.1_1_17:73949530-73951667:-|nuORF;nc|ENSG00000161533|Q15067-3|ACOX1;nc|ENSG00000161533|Q15067|ACOX1	101.45984612302182	0.07336148045341315	1				NaN	NaN	0	NaN	2096	3236	5332
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5335	20.128	NaN	2971.5	30	0	681.49	0.106	+			34922	SAAGAAFTK	9	55	412.2188386050197	822.4231242768394	2	412.21893310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAAGAAFTK_	ENSG00000258315|ENST00000439424|C17orf49;ENST00000549857.1_1_17:6918176-6918548:+|nuORF;nc|ENSG00000258315|Q8IXM2-2|BAP18;nc|ENSG00000258315|Q8IXM2-3|BAP18	88.17693792209575	0.07000514020414955	1				NaN	NaN	0	NaN	2097	3236	5332
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5336	20.129	NaN	1612.4	30	0	202.96	0.031	+			17348	IAKGGAAL	8	41	350.7211523124027	699.4277516916054	2	350.72119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IAKGGAAL_	ENSG00000104413|ENST00000433389|ESRP1;ESRP1|p.L333Sfs*55|1|0.35|ENSG00000104413|chr8:94668009-94668009|G/-|frameshift_variant;ESRP1|p.N512Hfs*7|2|0.33|ENSG00000104413|chr8:94674383-94674384|AA/-|frameshift_variant;ESRP1|p.N512Kfs*8|1|0.48|ENSG00000104413|chr8:94674382-94674383|-/A|frameshift_variant;ESRP1|p.N512Tfs*2|2|0.36|ENSG00000104413|chr8:94674383-94674383|A/-|frameshift_variant;nc|ENSG00000104413|Q6NXG1-2|ESRP1;nc|ENSG00000104413|Q6NXG1-3|ESRP1;nc|ENSG00000104413|Q6NXG1-4|ESRP1;nc|ENSG00000104413|Q6NXG1-5|ESRP1	65.89745868150666	0.44339748671293633	1				NaN	NaN	0	NaN	2098	3236	5332
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5348	20.155	NaN	17452	30	0	2015	0.214	+			27733	MQNMSIHTK	9	81	363.84431030340517	1088.5111015104155	3	363.84454345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MQNMSIHTK_	CON__H-INV:HIT000292931;CON__P05787;CON__REFSEQ:XP_092267;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	98.58198989935565	0.04066992115528678	1				NaN	NaN	0	NaN	2107	3239	5347
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5349	20.158	NaN	1557.8	30	0	147.49	0.106			+	19237	KAAQQMLQ	8	55	467.2433182064431	932.4720834796863	2	467.2431945800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_KAAQQM(Oxidation (M))LQ_	REV__ENSG00000151276|ENST00000402939|MAGI1;REV__nc|ENSG00000151276|Q96QZ7-3|MAGI1;REV__nc|ENSG00000151276|Q96QZ7-4|MAGI1;REV__nc|ENSG00000151276|Q96QZ7-5|MAGI1;REV__nc|ENSG00000151276|Q96QZ7-6|MAGI1;REV__nc|ENSG00000151276|Q96QZ7-7|MAGI1;REV__nc|ENSG00000151276|Q96QZ7|MAGI1	47.91560031466742	0.6071945918984287	1				NaN	NaN	0	NaN	2108	3239	5347
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5350	20.16	NaN	608.24	30	0	74.038	0.106			+	31716	QNTNQIKAF	9	35	532.2822875976562	NaN	0	532.2822875976562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QNTNQIKAF_	REV__DNAH5|p.F4486Lfs*7|2|0.23|ENSG00000039139|chr5:13701317-13701317|A/-|frameshift_variant;REV__DNAH5|p.G1976Efs*78|3|0.44|ENSG00000039139|chr5:13830731-13830731|C/-|frameshift_variant;REV__DNAH5|p.I1855Sfs*16|1|0.33|ENSG00000039139|chr5:13841052-13841052|T/-|frameshift_variant;REV__DNAH5|p.I2945Rfs*76|1|0.07|ENSG00000039139|chr5:13780948-13780949|-/CATTTCTCTT|frameshift_variant;REV__DNAH5|p.I4068*|1|0.07|ENSG00000039139|chr5:13721077-13721077|T/-|frameshift_variant;REV__DNAH5|p.L1467Wfs*3|1|0.23|ENSG00000039139|chr5:13864593-13864593|A/-|frameshift_variant;REV__DNAH5|p.P3316Lfs*22|3|0.33|ENSG00000039139|chr5:13766130-13766130|G/-|frameshift_variant;REV__ENSG00000039139|ENST00000265104|DNAH5	22.579656572578934	0.3605601358598771	1				NaN	NaN	0	NaN	2109	3239	5347
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5351	20.162	NaN	1733	30	0	376.04	0.106			+	8907	EEVEPFLRM	9	39	575.2823938784176	1148.550234823635	2	575.7855224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EEVEPFLRM_	REV__ENST00000338272.8_1_1:109638293-109638542:+|nuORF	65.46538089061403	0.16805504838372562	1				NaN	NaN	0	NaN	2110	3239	5347
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5352	20.164	NaN	4693.6	30	0	1195.3	0.038				-1	LGMLCAARLR	10	44	401.55420621416647	1201.6407892426994	3	401.55426025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))LGMLC(Carbamidomethyl (C))AARLR_	ENST00000334444.10_1_3:183732224-183735750:-|nuORF	35.15202426646627	0.5927656479315102	1				NaN	NaN	0	NaN	2111	3239	5347
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5363	20.189	NaN	1515.4	30	0	228.6	0.214	+			34359	RTQIPMSEK	9	50	545.2897385397047	1088.5649241462093	2	545.2904052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTQIPMSEK_	ENSG00000169435|ENST00000307439|RASSF6;nc|ENSG00000169435|Q6ZTQ3-3|RASSF6;nc|ENSG00000169435|Q6ZTQ3-4|RASSF6;nc|ENSG00000169435|Q6ZTQ3|RASSF6;RASSF6|p.K253Nfs*25|1|0.16|ENSG00000169435|chr4:73582195-73582195|T/-|frameshift_variant	55.721020083383095	0.24928445224720705	1				NaN	NaN	0	NaN	2119	3242	5362
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5364	20.193	NaN	2152.4	30	0	775.09	0.036			+	-1	SALTMLGLCL	10	30	360.19266607614895	NaN	0	360.19287109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SALTMLGLC(Carbamidomethyl (C))L_	REV__nc|ENSG00000180663|Q9BXE9|VN1R3	36.446750945000026	0.3805027428805705	1				NaN	NaN	0	NaN	2120	3242	5362
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5370	20.207	NaN	1254.2	30	0	167.11	0.142	+			42638	TAVGSSTRY	9	46	471.2381984924165	940.461844051633	2	471.2385559082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAVGSSTRY_	ENSG00000173120|ENST00000529006|KDM2A;ENST00000524657.1_1_11:67020024-67022523:+|nuORF;nc|ENSG00000173120|Q9Y2K7-2|KDM2A;nc|ENSG00000173120|Q9Y2K7-4|KDM2A;nc|ENSG00000173120|Q9Y2K7-5|KDM2A	56.43379154798735	0.2433427591689151	1				NaN	NaN	0	NaN	2123	3245	5369
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5378	20.228	NaN	2065.9	30	0	368.62	0.214	+			1071	AEKYAKESL	9	53	519.7771445295142	1037.5397361258283	2	519.7781982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEKYAKESL_	ENSG00000100567|ENST00000216455|PSMA3;ENST00000557290.1_1_14:58737043-58738610:+|nuORF;nc|ENSG00000100567|P25788-2|PSMA3	76.16968421966216	0.11411088698345859	1				NaN	NaN	0	NaN	2128	3248	5377
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5379	20.231	NaN	4409.3	30	0	1340	0.106	+			5128	ATSSVSALK	9	51	432.2452123163292	862.4758716994584	2	432.2452697753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATSSVSALK_	ENSG00000177084|ENST00000320574|POLE;ENST00000539357.1_1_12:133257669-133263919:-|nuORF;POLE|p.A2030Pfs*18|1|0.14|ENSG00000177084|chr12:132632712-132632712|C/-|frameshift_variant;POLE|p.E396Sfs*16|1|0.1|ENSG00000177084|chr12:132675438-132675438|C/-|frameshift_variant;POLE|p.K1170Nfs*49|1|0.15|ENSG00000177084|chr12:132657208-132657208|T/-|frameshift_variant;POLE|p.K325Sfs*19|1|0.27|ENSG00000177084|chr12:132676142-132676142|G/-|frameshift_variant	67.49366992349736	0.1516260258713357	1				NaN	NaN	0	NaN	2129	3248	5377
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5380	20.233	NaN	1071.2	30	0	375.56	0.106	+			2400	APAAASSLGP	10	41	421.2243545375812	840.4341561419624	2	421.2246398925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_APAAASSLGP_	ENSG00000225828|ENST00000432622|FAM229A;ENST00000416512.1_1_1:32827557-32827692:-|nuORF	27.882242232435846	0.6521336255503853	1				NaN	NaN	0	NaN	2130	3248	5377
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5381	20.235	NaN	576.66	30	0	71.01	0.036			+	49462	VVWQCDGHR	9	39	550.2606811523438	NaN	0	550.2606811523438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVWQCDGHR_	REV__ENST00000301785.5_1_11:62482034-62482370:-|nuORF	37.15910966729921	0.2899585034171616	1				NaN	NaN	0	NaN	2131	3248	5377
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5392	20.26	NaN	3670.3	30	0	568.54	0.214	+			39251	STAMNGNLAK	10	71	503.7528904074425	1005.4912278816851	2	503.7538146972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STAMNGNLAK_	ENSG00000184675|ENST00000374869|AMER1	72.87924865735499	0.25379688738724415	1				NaN	NaN	0	NaN	2139	3251	5391
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5393	20.264	NaN	2309.3	30	0	564.85	0.106	+			6755	CEAARSEIQV	10	44	553.267600196654	1104.520647460108	2	553.2692260742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_CEAARSEIQV_	ENSG00000013441|ENST00000321356|CLK1;ENST00000461981.5_1_2:201722417-201724542:-|nuORF;ENST00000473565.5_1_2:201718031-201724542:-|nuORF;nc|ENSG00000013441|P49759-3|CLK1	29.170058357718403	0.6416167986984785	1				NaN	NaN	0	NaN	2140	3251	5391
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5394	20.266	NaN	2736.4	30	0	471.09	0.106	+			45727	VACGSAHTL	9	53	458.2213245463023	NaN	0	458.2216491699219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_VAC(Carbamidomethyl (C))GSAHTL_	ENSG00000128731|ENST00000261609|HERC2;HERC2|p.N4304S|1|0.12|ENSG00000128731|chr15:28125085-28125085|T/C|missense_variant	53.351449002276354	0.18359631779194618	1				NaN	NaN	0	NaN	2141	3251	5391
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5395	20.268	NaN	1942.1	30	0	446.58	0.106	+			43429	TGKTIVGLHI	10	33	346.8817885163267	1037.6235361491802	3	346.8818054199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TGKTIVGLHI_	ENSG00000130589|ENST00000467148|HELZ2;HELZ2|p.G2213Vfs*22|1|0.14|ENSG00000130589|chr20:63561876-63561876|C/-|frameshift_variant;HELZ2|p.R2206Vfs*29|2|0.28|ENSG00000130589|chr20:63561898-63561898|G/-|frameshift_variant;nc|ENSG00000130589|Q9BYK8-2|HELZ2;nc|ENSG00000130589|Q9BYK8|HELZ2	21.68575002086885	0.7027366847906487	1				NaN	NaN	0	NaN	2142	3251	5391
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5396	20.269	NaN	3261.9	30	0	333.54	0.106	+			15982	HAKEENLSM	9	62	529.7505713775952	1057.4865898219903	2	529.7511596679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HAKEENLSM_	ENST00000558264.5_1_15:63353458-63363368:+|nuORF;nc|ENSG00000140416|P09493-2|TPM1;nc|ENSG00000140416|P09493-3|TPM1;nc|ENSG00000140416|P09493-7|TPM1;nc|ENSG00000140416|P09493-8|TPM1;nc|ENSG00000140416|P09493-9|TPM1	65.46538089061403	0.16805504838372562	1				NaN	NaN	0	NaN	2143	3251	5391
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5397	20.271	NaN	5932.2	30	0	1389.4	0.106	+			48983	VVGKPIEVQK	10	71	548.8397056132858	1095.6648582933715	2	548.8407592773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VVGKPIEVQK_	ENSG00000166391|ENST00000198801|MOGAT2;nc|ENSG00000166391|Q3SYC2-2|MOGAT2	102.0615471778698	0.07157459376830236	1				NaN	NaN	0	NaN	2144	3251	5391
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5398	20.273	NaN	1263.2	30	0	170.28	0.036			+	-1	CPHKVVSLK	9	40	356.5397033691406	NaN	0	356.5397033691406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_C(Carbamidomethyl (C))PHKVVSLK_	REV__ENST00000449600.1_1_2:110936461-110959062:-|nuORF	37.81151784470057	0.28666463014928195	1				NaN	NaN	0	NaN	2145	3251	5391
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5409	20.298	NaN	2316.7	30	0	462.71	0.214			+	7231	DALALRTP	8	47	428.7479639795524	855.4813750259049	2	428.7484436035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DALALRTP_	REV__ENST00000448973.6_1_16:684599-685202:-|nuORF	71.29570347882199	0.39610197767395533	1				NaN	NaN	0	NaN	2153	3254	5408
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5410	20.302	NaN	2301.5	30	0	905.09	0.106				-1	MAEKCCQA	8	49	478.68481147503826	955.3550700168765	2	478.6854553222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))AEKC(Carbamidomethyl (C))CQA_	ENSG00000186716|ENST00000305877|BCR;nc|ENSG00000186716|P11274-2|BCR	26.79610172149135	0.7524337208463756	1				NaN	NaN	0	NaN	2154	3254	5408
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5411	20.304	NaN	1241.8	30	0	234.72	0.106				-1	AAAGPSCALK	10	47	473.2446890354725	944.474825137745	2	473.24517822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_AAAGPSC(Carbamidomethyl (C))ALK_	ENSG00000125968|ENST00000376112|ID1;ID1|p.G120Afs*20|1|0.38|ENSG00000125968|chr20:31605737-31605737|C/-|frameshift_variant;nc|ENSG00000125968|P41134-2|ID1	36.446750945000026	0.5818864909973037	1				NaN	NaN	0	NaN	2155	3254	5408
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5412	20.306	NaN	1152.1	30	0	298.01	0.034			+	48428	VTKDVKTN	8	43	452.7582092285156	NaN	0	452.7582092285156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTKDVKTN_	REV__ENST00000390555.3_1_14:106135325-106136152:-|nuORF;REV__nc|ENSG00000211893|P01859-1|IGHG2;REV__nc|ENSG00000211893|P01859|IGHG2	37.15910966729921	1.7418937515398478	1				NaN	NaN	0	NaN	2156	3254	5408
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5423	20.331	NaN	17769	30	0	2212	0.214	+			34721	RVYGGLTTK	9	80	497.7873987890696	993.5602446449392	2	497.7874450683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVYGGLTTK_	ENSG00000170248|ENST00000307296|PDCD6IP;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP	141.52041321563706	0.009766778904176347	1				NaN	NaN	0	NaN	2164	3257	5422
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5424	20.334	NaN	23563	30	0	9155.9	0.106	+			6471	AVYLSTCKDSK	11	64	424.54774016903866	1270.621391107316	3	424.5480041503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_AVYLSTC(Carbamidomethyl (C))KDSK_	ENSG00000231925|ENST00000434618|TAPBP;nc|ENSG00000231925|O15533-3|TAPBP;nc|ENSG00000231925|O15533-4|TAPBP	72.2432373244024	0.21703855426835802	1				NaN	NaN	0	NaN	2165	3257	5422
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5425	20.336	NaN	8890.9	30	0	8207.9	0.106	+			8575	EAYLDSLAPR	10	30	378.8647577267366	1133.57244378041	3	378.8648376464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EAYLDSLAPR_	ENST00000341807.8_1_8:139668156-139688814:-|nuORF	25.57405402267927	0.6709832231498071	1				NaN	NaN	0	NaN	2166	3257	5422
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5426	20.338	NaN	1874.1	30	0	617.85	0.106			+	21181	KKYVTQIQ	8	55	504.2978640655278	1006.5811751978556	2	504.2976989746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KKYVTQIQ_	REV__tr|U7STC5|U7STC5_FUSNUThreonine/serineexporter-likeN-terminaldomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01363PE=3SV=1	58.78195531508484	0.5138399468736706	1				NaN	NaN	0	NaN	2167	3257	5422
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5427	20.34	NaN	2047.5	30	0	373.03	0.037			+	50019	WCTIKHIYA	9	51	567.7936546381408	1133.5727563430814	2	567.7940063476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_WCTIKHIYA_	REV__L1MC1_dup2138|chr3:11203375-11203979:-|1.868897465743888|0.2278259033593264|3.04|481.0|26|1|anti-sense	40.5726180659479	0.4135428067754104	1				NaN	NaN	0	NaN	2168	3257	5422
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5438	20.365	NaN	12017	30	0	4005	0.214	+			15403	GTYGLDSVKKK	11	52	399.22727297319545	1194.6599895197864	3	399.22723388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTYGLDSVKKK_	ENSG00000087338|ENST00000282570|GMCL1	27.64392233501311	0.6998289966465058	1				NaN	NaN	0	NaN	2176	3260	5437
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5439	20.369	NaN	1578	30	0	176.05	0.106	+			16363	HENDVKTAL	9	54	513.7648907984674	NaN	0	513.7647705078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HENDVKTAL_	ENSG00000165533|ENST00000380656|TTC8;nc|ENSG00000165533|Q8TAM2-3|TTC8;TTC8|p.K269Rfs*38|1|0.08|ENSG00000165533|chr14:88857236-88857237|-/GGATGAATAG|frameshift_variant	46.45678178249821	0.2311111838007999	1				NaN	NaN	0	NaN	2177	3260	5437
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5440	20.371	NaN	806.37	30	0	227.52	0.106			+	17023	HPTWKAWE	8	38	527.757554866966	NaN	0	527.7568969726562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HPTWKAWE_	REV__ENSG00000243627|ENST00000450895|SMIM34	40.77816245573522	1.7418937515398478	1				NaN	NaN	0	NaN	2178	3260	5437
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5441	20.372	NaN	1750.1	30	0	381.44	0.106	+			13370	GLAPILGPGSG	11	43	469.7688616566353	937.5231703800706	2	469.7685241699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GLAPILGPGSG_	ENSG00000178928|ENST00000698655|TPRX1;nc|ENSG00000178928|Q8N7U7-2|TPRX1;nc|ENSG00000178928|Q8N7U7|TPRX1	53.351449002276354	0.38280258784255455	1				NaN	NaN	0	NaN	2179	3260	5437
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5442	20.374	NaN	3121.4	30	0	478.54	0.106	+			3317	ASLTEIEH	8	56	450.2269402209667	898.4393275087334	2	450.2272033691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASLTEIEH_	ENSG00000143365|ENST00000318247|RORC;nc|ENSG00000143365|P51449-2|RORC	47.91560031466742	0.6071945918984287	1				NaN	NaN	0	NaN	2180	3260	5437
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5443	20.376	NaN	1379.6	30	0	304.64	0.034			+	-1	GCLGVLCVV	9	51	460.2399035054927	918.4652540777854	2	460.2400207519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_GC(Carbamidomethyl (C))LGVLCVV_	REV__ENSG00000139874|ENST00000267377|SSTR1	39.021493756699265	0.43173687394350213	1				NaN	NaN	0	NaN	2181	3260	5437
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5452	20.396	NaN	4571.4	30	0	1830.6	0.214	+			36416	SETTAAHSL	9	62	458.7222030426237	915.4298531520474	2	458.7223815917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SETTAAHSL_	ENSG00000119408|ENST00000320246|NEK6;nc|ENSG00000119408|Q9HC98-2|NEK6;nc|ENSG00000119408|Q9HC98-3|NEK6;nc|ENSG00000119408|Q9HC98-4|NEK6	104.74654710444128	0.034358562718640136	1				NaN	NaN	0	NaN	2187	3263	5451
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5453	20.4	NaN	3677.2	30	0	353.82	0.106	+			10154	ESSQPVGPV	9	62	450.2269402209667	898.4393275087334	2	450.22723388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ESSQPVGPV_	ENSG00000158639|ENST00000374955|PAGE5;nc|ENSG00000158639|Q96GU1|PAGE5	40.77816245573522	0.41113185337114944	1				NaN	NaN	0	NaN	2188	3263	5451
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5454	20.402	NaN	1444.7	30	0	285.33	0.106	+			27295	MGQTSVSTL	9	48	462.2283946302277	922.4422363272554	2	462.2286682128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MGQTSVSTL_	ENSG00000112419|ENST00000440869|PHACTR2;ENST00000402863.3_1_6:143999267-144075081:+|nuORF;nc|ENSG00000112419|O75167-2|PHACTR2;PHACTR2|p.L340Sfs*4|2|0.36|ENSG00000112419|chr6:143765608-143765609|-/C|frameshift_variant;PHACTR2|p.N196Ifs*80|2|0.28|ENSG00000112419|chr6:143760559-143760559|A/-|frameshift_variant;PHACTR2|p.N196Kfs*7|1|0.25|ENSG00000112419|chr6:143760558-143760559|-/A|frameshift_variant;PHACTR2|p.P339Lfs*30|1|0.33|ENSG00000112419|chr6:143765609-143765609|C/-|frameshift_variant;PHACTR2|p.T229Qfs*47|1|0.32|ENSG00000112419|chr6:143765277-143765277|A/-|frameshift_variant	29.170058357718403	0.5306379469863586	1				NaN	NaN	0	NaN	2189	3263	5451
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5455	20.403	NaN	1633.2	30	0	114.45	0.035	+			28631	NLAEAQQKL	9	54	507.78225675272057	1013.5499605722412	2	507.7826843261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NLAEAQQKL_	CDC37L1|p.A316Yfs*10|1|0.05|ENSG00000106993|chr9:4706041-4706042|-/CATACATATATATT|frameshift_variant;ENSG00000106993|ENST00000381854|CDC37L1;ENST00000479095.1_1_9:4679767-4685161:+|nuORF	70.8162118820467	0.13725933411854815	1				NaN	NaN	0	NaN	2190	3263	5451
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5464	20.424	NaN	7585.3	30	0	1926.7	0.214	+			38620	SSGVPNPPK	9	59	441.7375028532406	881.4604527732812	2	441.73736572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSGVPNPPK_	ENSG00000115207|ENST00000264720|GTF3C2	62.107414245175825	0.1960472003779324	1				NaN	NaN	0	NaN	2196	3266	5463
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5465	20.427	NaN	1963.3	30	0	328.84	0.034	+			5512	AVAEPANAVK	10	47	485.271643903699	968.528734874198	2	485.270751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVAEPANAVK_	ENSG00000173821|ENST00000582970|RNF213;ENST00000559070.5_1_17:78261823-78310301:+|nuORF;nc|ENSG00000173821|Q63HN8-4|RNF213;nc|ENSG00000173821|Q63HN8-5|RNF213;nc|ENSG00000173821|Q63HN8|RNF213;RNF213|p.C5022Lfs*7|1|0.3|ENSG00000173821|chr17:80389237-80389237|G/-|frameshift_variant;RNF213|p.N360Kfs*37|1|0.13|ENSG00000173821|chr17:80289797-80289798|-/A|frameshift_variant;RNF213|p.P2167Lfs*64|1|0.09|ENSG00000173821|chr17:80344834-80344835|-/T|frameshift_variant;RNF213|p.Q1953Rfs*50|2|0.13|ENSG00000173821|chr17:80340219-80340219|C/-|frameshift_variant	36.446750945000026	0.5818864909973037	1				NaN	NaN	0	NaN	2197	3266	5463
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5477	20.453	NaN	958.28	30	0	275.01	0.144	+			2779	ARPQSMENSP	10	32	558.7594343386188	NaN	0	558.7586669921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ARPQSMENSP_	ENSG00000137501|ENST00000359152|SYTL2;ENST00000438197.2_1_11:85444955-85468786:-|nuORF;nc|ENSG00000137501|Q9HCH5-13|SYTL2;nc|ENSG00000137501|Q9HCH5-14|SYTL2;nc|ENSG00000137501|Q9HCH5-15|SYTL2;nc|ENSG00000137501|Q9HCH5-6|SYTL2;nc|ENSG00000137501|Q9HCH5|SYTL2;SYTL2|p.Q663Tfs*35|1|0.14|ENSG00000137501|chr11:85709344-85709345|-/T|frameshift_variant	14.137123925751023	0.4201028297492154	1				NaN	NaN	0	NaN	2206	3269	5476
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5489	20.48	NaN	12338	30	0	4593.2	0.215	+			15198	GTSSAVSLK	9	53	425.23743811544006	848.4603232976801	2	425.2376403808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTSSAVSLK_	ENSG00000164828|ENST00000401592|SUN1;ENST00000340926.7_1_7:872152-889323:+|nuORF;ENST00000413171.6_1_7:872152-892516:+|nuORF;ENST00000427969.5_1_7:878456-882177:+|nuORF;ENST00000483996.1_1_7:872152-878624:+|nuORF;nc|ENSG00000164828|O94901-2|SUN1;nc|ENSG00000164828|O94901-3|SUN1;nc|ENSG00000164828|O94901-4|SUN1;nc|ENSG00000164828|O94901-5|SUN1;nc|ENSG00000164828|O94901-6|SUN1;nc|ENSG00000164828|O94901-7|SUN1;nc|ENSG00000164828|O94901-9|SUN1;SUN1|p.E739Gfs*27|1|0.41|ENSG00000164828|chr7:872532-872533|-/G|frameshift_variant	112.41091882917199	0.026537921851008135	1				NaN	NaN	0	NaN	2215	3272	5488
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5490	20.484	NaN	1962.5	30	0	683.88	0.106	+			12335	GDKETFIASE	10	55	548.7604570780761	NaN	0	548.76025390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GDKETFIASE_	ENSG00000132510|ENST00000448097|KDM6B;nc|ENSG00000132510|O15054-1|KDM6B	26.69291269510374	0.4125295221340092	1				NaN	NaN	0	NaN	2216	3272	5488
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5491	20.486	NaN	1810.4	30	0	478.54	0.037			+	1535	AGAYGNFPTLQ	11	35	380.1894443770796	1137.5465037314389	3	380.1893005371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AGAYGNFPTLQ_	REV__ENSG00000140284|ENST00000267842|SLC27A2;REV__nc|ENSG00000140284|O14975-2|SLC27A2	26.69291269510374	0.70980431218767	1				NaN	NaN	0	NaN	2217	3272	5488
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5502	20.509	NaN	2389.2	30	0	613.87	0.214	+			6957	CPMAERWL	8	59	503.23704245426774	1004.4595319753355	2	503.2380676269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CPMAERWL_	ENST00000372518.4_1_20:44519377-44519782:-|nuORF	38.80614096846853	0.6637206697844082	1				NaN	NaN	0	NaN	2225	3275	5501
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5503	20.513	NaN	3759.5	30	0	712.31	0.106	+			36291	SEREMRNTL	9	59	568.2795917746697	1134.5446306161393	2	568.2806396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEREMRNTL_	ENSG00000113810|ENST00000357388|SMC4;ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4	77.31757898189308	0.1091473830098891	1				NaN	NaN	0	NaN	2226	3275	5501
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5504	20.515	NaN	1073.2	30	0	112.64	0.035	+			1898	AINDKSIVK	9	51	494.29603501338175	NaN	0	494.29608154296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AINDKSIVK_	ENSG00000131351|ENST00000253669|HAUS8;nc|ENSG00000131351|Q9BT25-2|HAUS8;nc|ENSG00000131351|Q9BT25-3|HAUS8	76.16968421966216	0.08450868013726211	1				NaN	NaN	0	NaN	2227	3275	5501
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5516	20.54	NaN	5676.4	30	0	2296.6	0.214	+			23839	LCWDGARTTL	10	35	379.1891253559367	NaN	0	379.18896484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LCWDGARTTL_	ENST00000560131.1_1_15:63356108-63358095:+|nuORF	35.15202426646627	0.38475398474706135	1				NaN	NaN	0	NaN	2236	3278	5515
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5517	20.544	NaN	1562.1	30	0	374.74	0.106			+	20955	KKDPSRQAA	9	46	500.7801818847656	NaN	0	500.7801818847656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KKDPSRQAA_	REV__ENSG00000101346|ENST00000375749|POFUT1;REV__nc|ENSG00000101346|Q9H488-2|POFUT1	37.81151784470057	0.28666463014928195	1				NaN	NaN	0	NaN	2237	3278	5515
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5518	20.546	NaN	1112.7	30	0	170.28	0.106	+			6816	CGVTAPMFTF	10	39	537.2450561523438	NaN	0	537.2450561523438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_CGVTAPMFTF_	ENSG00000119737|ENST00000394705|GPR75	20.94693142431847	0.4201028297492154	1				NaN	NaN	0	NaN	2238	3278	5515
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5519	20.548	NaN	2578	30	0	613.65	0.106	+			21916	KRTKAGIY	8	50	468.78485718331694	935.5551614334339	2	468.7849426269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KRTKAGIY_	ENST00000561440.1_1_15:83207600-83207885:-|nuORF	26.79610172149135	0.7524337208463756	1				NaN	NaN	0	NaN	2239	3278	5515
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5520	20.55	NaN	1266	30	0	421.55	0.106			+	-1	PCCPSRRSQL	10	44	401.8626708984375	NaN	0	401.8626708984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_PCC(Carbamidomethyl (C))PSRRSQL_	REV__ENST00000272972.7_1_2:241494422-241497352:-|nuORF	27.047317107675042	0.41136583337917604	1				NaN	NaN	0	NaN	2240	3278	5515
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5521	20.551	NaN	2543.1	30	0	530.03	0.106	+			19223	KAAHLSLKQ	9	51	498.30465661241345	994.5947602916269	2	498.3053894042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KAAHLSLKQ_	CNTN4|p.G935Dfs*35|1|0.41|ENSG00000144619|chr3:3043692-3043692|A/-|frameshift_variant	50.033510581677724	0.3025703251535696	1				NaN	NaN	0	NaN	2241	3278	5515
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5522	20.553	NaN	706.31	30	0	188.1	0.034	+			80	AACCVVTKGI	10	45	482.7508239746094	NaN	0	482.7508239746094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AACCVVTKGI_	ENST00000495718.5_1_1:59762794-59812023:+|nuORF	32.81241826257853	0.3924360933802784	1				NaN	NaN	0	NaN	2242	3278	5515
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5533	20.578	NaN	2036.3	30	0	251.13	0.214	+			48818	VVAQTKAISG	10	58	487.2881691546219	972.5617853760439	2	487.2879943847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVAQTKAISG_	ENSG00000275395|ENST00000616721|FCGBP;FCGBP-ACSS2|1|fusion;nc|ENSG00000275395|Q9Y6R7|FCGBP	51.52775601994872	0.4429225830406686	1				NaN	NaN	0	NaN	2250	3281	5532
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5534	20.582	NaN	792.6	30	0	76.012	0.106	+			20884	KIQETFAQK	9	53	546.8069128452522	NaN	0	546.8071899414062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KIQETFAQK_	ENST00000519940.5_1_19:48735037-48741646:-|nuORF	93.1432384553994	0.0352600271724948	1				NaN	NaN	0	NaN	2251	3281	5532
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5535	20.584	NaN	1624.8	30	0	1016	0.106	+			19289	KAFVGAFKK	9	40	332.53943579316194	NaN	0	332.53955078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KAFVGAFKK_	ENSG00000160796|ENST00000450053|NBEAL2;NBEAL2|p.C1705Vfs*45|1|0.24|ENSG00000160796|chr3:47002246-47002246|T/-|frameshift_variant;NBEAL2|p.P1303Lfs*63|1|0.21|ENSG00000160796|chr3:47000002-47000002|C/-|frameshift_variant;NBEAL2|p.Y1346Tfs*20|1|0.44|ENSG00000160796|chr3:47000132-47000132|T/-|frameshift_variant;nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2;nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2	36.446750945000026	0.29355505452396785	1				NaN	NaN	0	NaN	2252	3281	5532
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5536	20.586	NaN	1373.7	30	0	254.21	0.106	+			36491	SEVVNLSNK	9	50	495.26713459262345	NaN	0	495.26678466796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SEVVNLSNK_	CEP135|p.R405Tfs*2|1|0.31|ENSG00000174799|chr4:55971370-55971371|AA/-|frameshift_variant;ENSG00000174799|ENST00000257287|CEP135;ENST00000515081.1_1_4:56820464-56832049:+|nuORF	49.44154591367651	0.21054156626303966	1				NaN	NaN	0	NaN	2253	3281	5532
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5537	20.588	NaN	1299.9	30	0	130.81	0.106				-1	 	0	44	643.6255753843667	NaN	0	643.2921752929688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	2254	3281	5532
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5538	20.589	NaN	916.53	30	0	234.38	0.034	+			20464	KEVLLFPA	8	41	458.77691650390625	NaN	0	458.77691650390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KEVLLFPA_	ENSG00000065427|ENST00000302445|KARS1;nc|ENSG00000065427|Q15046-2|KARS1	42.47446043378293	1.7418937515398478	1				NaN	NaN	0	NaN	2255	3281	5532
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5539	20.59	NaN	2664.9	30	0	543.31	0.139	+			42226	TAALADGIKS	10	47	473.7635205463213	945.5124881594426	2	473.7637634277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TAALADGIKS_	ENSG00000105647|ENST00000222254|PIK3R2	56.43379154798735	0.3982744522255666	1				NaN	NaN	0	NaN	2256	3281	5532
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5550	20.617	NaN	3232.5	30	0	1168.4	0.214	+			4808	ATNTSAPDLK	10	48	509.2641712804902	1016.5137896277804	2	509.2645568847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATNTSAPDLK_	ENSG00000047849|ENST00000683076|MAP4;MAP4|p.T960Qfs*35|1|0.3|ENSG00000047849|chr3:47869309-47869309|T/-|frameshift_variant;MAP4|p.V999*|1|0.25|ENSG00000047849|chr3:47867318-47867318|T/-|frameshift_variant;nc|ENSG00000047849|P27816-2|MAP4;nc|ENSG00000047849|P27816-4|MAP4;nc|ENSG00000047849|P27816-5|MAP4;nc|ENSG00000047849|P27816-6|MAP4;nc|ENSG00000047849|P27816|MAP4	104.42354056486148	0.06456012287859861	1				NaN	NaN	0	NaN	2264	3284	5549
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5551	20.621	NaN	2157.2	30	0	405.62	0.106	+			48581	VTQNGGLYK	9	58	490.26414614782504	978.5137393624501	2	490.2637023925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTQNGGLYK_	ENSG00000100596|ENST00000216484|SPTLC2	72.2432373244024	0.13108886737667413	1				NaN	NaN	0	NaN	2265	3284	5549
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5552	20.623	NaN	6007.5	30	0	1703	0.106				-1	 	0	46	403.5589207259864	1207.6549327781593	3	403.5591735839844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	2266	3284	5549
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5553	20.624	NaN	1100.9	30	0	644.54	0.106	+			47711	VSFILSALPA	10	28	339.8695972503258	1016.5869623511774	3	339.8694763183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSFILSALPA_	ENSG00000158292|ENST00000377893|GPR153;GPR153|p.P336Rfs*20|1|0.28|ENSG00000158292|chr1:6250597-6250597|G/-|frameshift_variant	21.68575002086885	0.7027366847906487	1				NaN	NaN	0	NaN	2267	3284	5549
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5554	20.626	NaN	1272.1	30	0	190.72	0.106			+	-1	QCYRWRVRWMC	11	50	581.5979553279808	NaN	0	581.2622680664062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term),2 Carbamidomethyl (C)	_(Acetyl (Protein N-term))QC(Carbamidomethyl (C))YRWRVRWMC(Carbamidomethyl (C))_	REV__IQCF2|p.R111C|1|0.23|ENSG00000184345|chr3:51863206-51863206|C/T|missense_variant	1.3219263287936662	0.456735970842152	1				NaN	NaN	0	NaN	2268	3284	5549
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5555	20.628	NaN	1073.9	30	0	141.5	0.033			+	7024	CSGGLFFF	8	52	439.1987587523935	876.382964571587	2	439.1988220214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_CSGGLFFF_	REV__ENST00000315366.7_1_4:114900139-114900319:-|nuORF	49.21078951299608	0.5991576752473486	1				NaN	NaN	0	NaN	2269	3284	5549
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5556	20.628	NaN	1278.3	30	0	199.69	0.14	+			46342	VEKPAETHL	9	49	512.2771340588479	1022.5397151844958	2	512.2769775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VEKPAETHL_	ENSG00000198171|ENST00000354488|DDRGK1;nc|ENSG00000198171|Q96HY6-2|DDRGK1	49.44154591367651	0.3095138337212152	1				NaN	NaN	0	NaN	2270	3284	5549
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5569	20.658	NaN	11946	30	0	2748.5	0.214	+			7117	DAAKFMAQ	8	65	449.21160418772183	896.4086554422437	2	449.2120666503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_DAAKFM(Oxidation (M))AQ_	ENSG00000135298|ENST00000370598|ADGRB3	53.351449002276354	0.5676011784961348	1				NaN	NaN	0	NaN	2280	3287	5568
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5570	20.661	NaN	4619.3	30	0	2254.1	0.106	+			22522	KTQFPQLK	8	56	495.2924694410857	988.5703859489714	2	495.2929382324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTQFPQLK_	ENSG00000077935|ENST00000357450|SMC1B;nc|ENSG00000077935|Q8NDV3-2|SMC1B	79.45101966838831	0.3281480470254892	1				NaN	NaN	0	NaN	2281	3287	5568
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5571	20.663	NaN	4117.3	30	0	492.81	0.106	+			21725	KQLEDGRTL	9	62	530.2939769402085	NaN	0	530.2941284179688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KQLEDGRTL_	ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000399822.2_1_9:22012279-22012411:+|nuORF;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;UBB|p.D191Tfs*35|2|0.18|ENSG00000170315|chr17:16382471-16382471|C/-|frameshift_variant;UBB|p.D191Tfs*35|2|0.18|ENSG00000170315|chr17:16382471-16382471|C/-|frameshift_variant	104.01359247289065	0.015103351932921906	1				NaN	NaN	0	NaN	2282	3287	5568
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5572	20.665	NaN	2194.3	30	0	1336.6	0.032	+			47907	VSLPCGRS	8	31	409.7128191471612	817.4110853611224	2	409.7130126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSLPCGRS_	ENST00000355072.9_1_4:3241849-3242173:+|nuORF	30.503639358989545	0.7238069182250283	1				NaN	NaN	0	NaN	2283	3287	5568
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5581	20.687	NaN	3962.8	30	0	1368.7	0.214	+			39153	SSVPYSTAK	9	49	470.24227299659435	938.4699930599887	2	470.24237060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSVPYSTAK_	ENSG00000126883|ENST00000359428|NUP214;ENST00000525980.5_1_9:134025776-134070755:+|nuORF;nc|ENSG00000126883|P35658-2|NUP214;nc|ENSG00000126883|P35658-3|NUP214;nc|ENSG00000126883|P35658-4|NUP214;NUP214|p.P1285Rfs*3|1|0.28|ENSG00000126883|chr9:131197346-131197359|CCCAGGAGAACCTG/-|frameshift_variant	56.43379154798735	0.2433427591689151	1				NaN	NaN	0	NaN	2289	3290	5580
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5582	20.69	NaN	1725.8	30	0	528.31	0.106			+	51278	YRTTLLIQ	8	52	504.29759680000626	1006.5806406668125	2	504.29754638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YRTTLLIQ_	REV__APAF1|p.D266Y|1|0.26|ENSG00000120868|chr12:98662541-98662541|G/T|missense_variant	52.936696900407355	0.5717071646657654	1				NaN	NaN	0	NaN	2290	3290	5580
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5583	20.692	NaN	6490.9	30	0	1133.8	0.106	+			6072	AVNAHSNILK	10	67	533.8034937024331	1065.5924344716661	2	533.8040771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVNAHSNILK_	ENSG00000132305|ENST00000410111|IMMT;ENST00000409258.2_1_2:86386442-86398424:-|nuORF;ENST00000435590.1_1_21:46097057-46097849:-|nuORF;ENST00000474969.5_1_2:86385703-86422514:-|nuORF;ENST00000490238.5_1_2:86389097-86393741:-|nuORF;nc|ENSG00000132305|Q16891-2|IMMT;nc|ENSG00000132305|Q16891-3|IMMT;nc|ENSG00000132305|Q16891-4|IMMT	77.53327743719008	0.21577387331637743	1				NaN	NaN	0	NaN	2291	3290	5580
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5584	20.694	NaN	2941	30	0	537.1	0.034			+	27285	MGGHLRLF	8	55	465.7533601334839	929.4921673337678	2	465.75390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MGGHLRLF_	REV__ENSG00000125485|ENST00000372159|DDX31;REV__nc|ENSG00000125485|Q9H8H2-2|DDX31;REV__nc|ENSG00000125485|Q9H8H2-4|DDX31;REV__nc|ENSG00000125485|Q9H8H2|DDX31	54.76467175910256	0.5536104764165384	1				NaN	NaN	0	NaN	2292	3290	5580
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5593	20.715	NaN	20288	30	0	3423.9	0.214	+			5348	ATVTPSPVK	9	69	450.263159966458	898.511766999716	2	450.26312255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATVTPSPVK_	ENSG00000069275|ENST00000367142|NUCKS1;nc|ENSG00000069275|Q9H1E3-2|NUCKS1	101.25262130126117	0.03792372629710479	1				NaN	NaN	0	NaN	2298	3293	5592
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5594	20.719	NaN	68064	30	0	29297	0.106	+			6073	AVNAHSNILK	10	70	356.2047035779863	1065.592281334159	3	356.204833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVNAHSNILK_	ENSG00000132305|ENST00000410111|IMMT;ENST00000409258.2_1_2:86386442-86398424:-|nuORF;ENST00000435590.1_1_21:46097057-46097849:-|nuORF;ENST00000474969.5_1_2:86385703-86422514:-|nuORF;ENST00000490238.5_1_2:86389097-86393741:-|nuORF;nc|ENSG00000132305|Q16891-2|IMMT;nc|ENSG00000132305|Q16891-3|IMMT;nc|ENSG00000132305|Q16891-4|IMMT	45.97224482568171	0.49411383603842696	1				NaN	NaN	0	NaN	2299	3293	5592
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5595	20.721	NaN	15003	30	0	5890.7	0.106	+			3215	ASKYKAKQD	9	35	346.85720011136056	1037.5497709342817	3	346.8572998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASKYKAKQD_	nc|ENSG00000067992|Q15120-2|PDK3	23.04248740728303	0.5879033540491928	1				NaN	NaN	0	NaN	2300	3293	5592
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5596	20.723	NaN	1747.1	30	0	260.5	0.106	+			88	AADCAHEL	8	42	443.68950590235244	885.3644588715049	2	443.6897888183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_AADC(Carbamidomethyl (C))AHEL_	ENSG00000157379|ENST00000288111|DHRS1;ENST00000558340.1_1_14:24760067-24761569:-|nuORF;ENST00000561137.5_1_14:24760413-24761527:-|nuORF;ENST00000561273.5_1_14:24760714-24761569:-|nuORF	63.30626980617807	0.4690498839812213	1				NaN	NaN	0	NaN	2301	3293	5592
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5597	20.725	NaN	6387.9	30	0	1313.6	0.106	+			16137	HEAEGHIVTC	10	61	548.2476285445446	1094.480704155889	2	548.248291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HEAEGHIVTC_	ENSG00000100028|ENST00000215829|SNRPD3;ENST00000468770.1_1_22:24953642-24953888:+|nuORF;nc|ENSG00000286070|P62318-2|SNRPD3	82.24051045832904	0.17731618517892733	1				NaN	NaN	0	NaN	2302	3293	5592
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5598	20.726	NaN	1499.3	30	0	199.45	0.037	+			43952	TPEEDQRTY	9	54	569.7537907551734	1137.4930285771468	2	569.7551879882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TPEEDQRTY_	ENSG00000105771|ENST00000270066|SMG9;ENST00000595700.5_1_19:44242246-44254893:-|nuORF;nc|ENSG00000105771|Q9H0W8-2|SMG9;SMG9|p.H366Tfs*2|1|0.22|ENSG00000105771|chr19:43734395-43734395|G/-|frameshift_variant	51.19269402634007	0.2889735674168909	1				NaN	NaN	0	NaN	2303	3293	5592
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5608	20.75	NaN	7436.1	30	0	855.51	0.214	+			36081	SEKDTKQIL	9	70	531.2952533175719	1060.5759537019437	2	531.2957153320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEKDTKQIL_	ENSG00000183207|ENST00000595090|RUVBL2;ENST00000596247.5_1_19:49507512-49519096:+|nuORF;nc|ENSG00000183207|Q9Y230-2|RUVBL2	112.2953585152457	0.026655838328212944	1				NaN	NaN	0	NaN	2310	3296	5607
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5609	20.753	NaN	5261.2	30	0	581.28	0.106			+	10304	ETQFVRQL	8	70	340.85368016749607	1019.5392111026882	3	340.8537292480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ETQFVRQL_	REV__ENSG00000064270|ENST00000262429|ATP2C2;REV__ENST00000567222.1_1_16:84493993-84497335:+|nuORF;REV__nc|ENSG00000064270|O75185-2|ATP2C2;REV__nc|ENSG00000064270|O75185-3|ATP2C2	27.882242232435846	0.7440473649773525	1				NaN	NaN	0	NaN	2311	3296	5607
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5610	20.755	NaN	3571.1	30	0	336.65	0.106	+			11141	FGGLGSKSK	9	64	440.74764940530935	879.4807458774187	2	440.7476806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FGGLGSKSK_	ENSG00000124942|ENST00000378024|AHNAK	115.49404669440601	0.023927554121326553	1				NaN	NaN	0	NaN	2312	3296	5607
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5611	20.757	NaN	2853	30	0	268.06	0.106	+			47282	VNAHSNILK	9	58	498.2847614779215	994.554970022643	2	498.2848205566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VNAHSNILK_	ENSG00000132305|ENST00000410111|IMMT;ENST00000409258.2_1_2:86386442-86398424:-|nuORF;ENST00000435590.1_1_21:46097057-46097849:-|nuORF;ENST00000474969.5_1_2:86385703-86422514:-|nuORF;ENST00000490238.5_1_2:86389097-86393741:-|nuORF;nc|ENSG00000132305|Q16891-2|IMMT;nc|ENSG00000132305|Q16891-3|IMMT;nc|ENSG00000132305|Q16891-4|IMMT	70.8162118820467	0.13725933411854815	1				NaN	NaN	0	NaN	2313	3296	5607
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5612	20.759	NaN	1936.6	30	0	531	0.106	+			43702	TKLLPGNE	8	54	436.24786057055513	870.4811682079103	2	436.2476501464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TKLLPGNE_	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42|TTN;TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;TTN|p.D27440_G27441insVNESF|1|0.05|ENSG00000155657|chr2:178558109-178558110|-/CAAAGCTTTCATTAA|inframe_insertion;TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;TTN|p.K26626Nfs*34|1|0.34|ENSG00000155657|chr2:178561331-178561331|T/-|frameshift_variant;TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant;TTN|p.V27442Cfs*4|1|0.05|ENSG00000155657|chr2:178558107-178558108|-/A|frameshift_variant	29.14955571784316	0.7342621283720113	1				NaN	NaN	0	NaN	2314	3296	5607
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5613	20.761	NaN	1424	30	0	573.53	0.033			+	8074	DVPPAKPQ	8	43	426.23426360360224	850.4539742740045	2	426.2343444824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DVPPAKPQ_	REV__ENSG00000009954|ENST00000339594|BAZ1B;REV__nc|ENSG00000009954|Q9UIG0-2|BAZ1B	38.80614096846853	0.6637206697844082	1				NaN	NaN	0	NaN	2315	3296	5607
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5614	20.761	NaN	1115	30	0	134.27	0.138				-1	MLAQAQEV	8	51	453.22300492563033	NaN	0	453.2231750488281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_M(Oxidation (M))LAQAQEV_	ENSG00000170248|ENST00000307296|PDCD6IP;ENST00000459659.1_1_3:33863478-33868168:+|nuORF;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP;nc|ENSG00000170248|Q8WUM4-3|PDCD6IP;PDCD6IP|p.F351Nfs*37|1|0.08|ENSG00000170248|chr3:33836259-33836260|-/AATCC|frameshift_variant	63.30626980617807	1.7418937515398478	1				NaN	NaN	0	NaN	2316	3296	5607
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5622	20.781	NaN	3428.9	30	0	777.07	0.214				-1	 	0	51	448.7505630044719	895.4865730757439	2	448.7507629394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	2321	3299	5621
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5623	20.785	NaN	3140.8	30	0	1025.3	0.106	+			39308	STATATVSVGK	11	55	511.27959551772403	1020.5446381022481	2	511.279541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STATATVSVGK_	ENSG00000261150|ENST00000615648|EPPK1;EPPK1|p.G2015Vfs*36|2|0.33|ENSG00000261150|chr8:143867210-143867210|C/-|frameshift_variant;EPPK1|p.Q829Rfs*8|1|0.05|ENSG00000261150|chr8:143870770-143870770|C/-|frameshift_variant;EPPK1|p.Y695Ifs*68|1|0.36|ENSG00000261150|chr8:143871171-143871172|-/T|frameshift_variant	79.03558427241974	0.16041291136517336	1				NaN	NaN	0	NaN	2322	3299	5621
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5624	20.787	NaN	1362.4	30	0	151.39	0.106	+			6420	AVVSGESCPGK	11	49	517.2528457553339	1032.4911385774676	2	517.7555541992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVVSGESCPGK_	ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;ENST00000574894.1_1_16:16367711-16371421:+|nuORF;nc|ENSG00000185164|Q5JPE7-3|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2;NOMO1|p.P1102Hfs*42|1|0.36|ENSG00000103512|chr16:14886838-14886838|C/-|frameshift_variant	75.65223720490533	0.18861880313260296	1				NaN	NaN	0	NaN	2323	3299	5621
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5625	20.789	NaN	1473.1	30	0	138.53	0.106	+			44730	TTLSGGPLQP	10	54	485.76405268810214	969.5135524430043	2	485.7629089355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TTLSGGPLQP_	ENST00000356956.5_2_6:160431737-160445634:+|nuORF	52.936696900407355	0.4300801048568001	1				NaN	NaN	0	NaN	2324	3299	5621
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5626	20.79	NaN	2647.6	30	0	384.8	0.106			+	-1	VVLMCTSY	8	54	466.21688221895647	930.419211504713	2	466.21600341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_VVLM(Oxidation (M))CTSY_	REV__ENSG00000034693|ENST00000367591|PEX3;REV__PEX3|p.S167Rfs*13|1|0.06|ENSG00000034693|chr6:143471426-143471427|-/ATCTGAAA|frameshift_variant	54.76467175910256	0.5536104764165384	1				NaN	NaN	0	NaN	2325	3299	5621
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5627	20.792	NaN	1712.7	30	0	300.33	0.036			+	2015	AKLRLKYST	9	39	360.557398761084	NaN	0	360.5569763183594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AKLRLKYST_	REV__ENSG00000146555|ENST00000404826|SDK1;REV__ENST00000476701.5_1_7:4169443-4308379:+|nuORF;REV__nc|ENSG00000146555|Q7Z5N4-3|SDK1;REV__SDK1|p.V1762Wfs*2|1|0.28|ENSG00000146555|chr7:4208168-4208168|G/-|frameshift_variant	31.529811441608018	0.3183796599642538	1				NaN	NaN	0	NaN	2326	3299	5621
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5631	20.807	NaN	700.19	30	0	97.511	0.145				-1	LVPEHVVMTK	10	37	584.822137932373	NaN	0	584.8212890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LVPEHVVM(Oxidation (M))TK_	ENSG00000099817|ENST00000615234|POLR2E;ENST00000586817.5_1_19:1089487-1094188:-|nuORF	31.529811441608018	0.39664753963064203	1				NaN	NaN	0	NaN	2327	3302	5630
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5636	20.823	NaN	1441.3	30	0	127.51	0.214			+	27898	MTRTGYFLA	9	55	530.2662405775727	1058.5179282219453	2	530.2675170898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MTRTGYFLA_	REV__ENSG00000185420|ENST00000490107|SMYD3;REV__ENST00000366516.5_1_1:245912867-246093251:-|nuORF;REV__ENST00000366517.5_1_1:245912867-246116553:-|nuORF;REV__nc|ENSG00000185420|Q9H7B4-2|SMYD3;REV__nc|ENSG00000185420|Q9H7B4-3|SMYD3	27.882242232435846	0.5426732730940306	1				NaN	NaN	0	NaN	2329	3305	5635
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5637	20.827	NaN	1461.6	30	0	198.44	0.034	+			32257	QTLLHVSK	8	47	463.27674322679104	924.5389335203821	2	463.2769775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QTLLHVSK_	ARHGAP10|p.K252Ifs*56|1|0.04|ENSG00000071205|chr4:147875072-147875073|-/TTTT|frameshift_variant	39.252832667884924	0.6609488554722044	1				NaN	NaN	0	NaN	2330	3305	5635
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5644	20.844	NaN	3051	30	0	667.36	0.214	+			4794	ATNNMNLSR	9	57	510.7482554962853	1019.4819580593706	2	510.74871826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATNNMNLSR_	ENSG00000092148|ENST00000399332|HECTD1;ENST00000556004.1_1_14:31596982-31597923:-|nuORF;HECTD1|p.F2271Lfs*13|1|0.16|ENSG00000092148|chr14:31107059-31107059|A/-|frameshift_variant;HECTD1|p.I2041Lfs*27|1|0.36|ENSG00000092148|chr14:31113133-31113133|T/-|frameshift_variant;HECTD1|p.N1559H|1|0.32|ENSG00000092148|chr14:31128696-31128696|T/G|missense_variant	91.26522074875469	0.06129826844580791	1				NaN	NaN	0	NaN	2334	3308	5643
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5645	20.847	NaN	1889.1	30	0	464.59	0.035	+			20782	KIADMGHLK	9	48	506.78371664172454	1011.5528803502491	2	506.7846984863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KIADMGHLK_	ENSG00000132646|ENST00000379143|PCNA	68.84614121027924	0.14577793175421136	1				NaN	NaN	0	NaN	2335	3308	5643
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5650	20.862	NaN	5476.8	30	0	643.44	0.214	+			33435	RILACGVAK	9	62	494.29172677866234	986.5689006241247	2	494.2922058105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_RILAC(Carbamidomethyl (C))GVAK_	ENSG00000265972|ENST00000582401|TXNIP	71.87747018426188	0.13267044672804276	1				NaN	NaN	0	NaN	2337	3311	5649
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5651	20.865	NaN	3269.7	30	0	457.4	0.106	+			40642	SVAQTVVQK	9	56	480.27921348585323	958.5438740385065	2	480.27972412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVAQTVVQK_	ENSG00000057294|ENST00000340811|PKP2;nc|ENSG00000057294|Q99959|PKP2	114.8945686534367	0.024290463251177924	1				NaN	NaN	0	NaN	2338	3311	5649
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5652	20.867	NaN	5644.4	30	0	2284.2	0.106				-1	AGLGGLMHLK	10	39	338.19151225497853	1011.5527073651356	3	338.1915283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_AGLGGLM(Oxidation (M))HLK_	ENSG00000133067|ENST00000367278|LGR6;ENST00000487787.5_1_1:202275897-202288332:+|nuORF;nc|ENSG00000133067|Q9HBX8-1|LGR6;nc|ENSG00000133067|Q9HBX8-2|LGR6	28.081489160057373	0.6505064946289502	1				NaN	NaN	0	NaN	2339	3311	5649
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5653	20.869	NaN	1839.7	30	0	217.24	0.106	+			41349	SVLVVAGSLK	10	58	486.80809674326116	NaN	0	486.80828857421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVLVVAGSLK_	DNAH11|p.A2559Sfs*4|1|0.42|ENSG00000105877|chr7:21738723-21738724|-/A|frameshift_variant;DNAH11|p.A4348Tfs*8|1|0.06|ENSG00000105877|chr7:21894990-21894991|-/CACTTTA|frameshift_variant;DNAH11|p.E3097Nfs*4|1|0.21|ENSG00000105877|chr7:21773946-21773946|A/-|frameshift_variant;DNAH11|p.L3180Sfs*6|1|0.05|ENSG00000105877|chr7:21784481-21784482|-/CAGA|frameshift_variant;DNAH11|p.N2201Kfs*6|1|0.04|ENSG00000105877|chr7:21707754-21707755|-/AGTAAAAGATTTC|frameshift_variant;DNAH11|p.N3090Kfs*2|1|0.09|ENSG00000105877|chr7:21773928-21773929|-/A|frameshift_variant;DNAH11|p.S2374Qfs*2|1|0.14|ENSG00000105877|chr7:21717910-21717911|-/C|frameshift_variant;DNAH11|p.T4414Nfs*34|1|0.37|ENSG00000105877|chr7:21900050-21900051|-/A|frameshift_variant;DNAH11|p.T4414Qfs*72|3|0.34|ENSG00000105877|chr7:21900051-21900051|A/-|frameshift_variant;DNAH11|p.W2255Mfs*9|1|0.04|ENSG00000105877|chr7:21710627-21710628|-/A|frameshift_variant;DNAH17|p.D2341Tfs*111|1|0.32|ENSG00000187775|chr17:78486305-78486305|G/-|frameshift_variant;DNAH17|p.G2596Afs*13|1|0.33|ENSG00000187775|chr17:78479600-78479600|G/-|frameshift_variant;DNAH17|p.K2058Qfs*32|1|0.09|ENSG00000187775|chr17:78494691-78494692|-/G|frameshift_variant;DNAH17|p.K3895Nfs*2|1|0.24|ENSG00000187775|chr17:78439210-78439210|T/-|frameshift_variant;DNAH17|p.N4131Tfs*34|2|0.38|ENSG00000187775|chr17:78429136-78429136|G/-|frameshift_variant;DNAH9|p.G3533Dfs*40|1|0.29|ENSG00000007174|chr17:11880190-11880190|A/-|frameshift_variant;DNAH9|p.I3688Tfs*40|1|0.11|ENSG00000007174|chr17:11886915-11886924|ATCATGAACG/-|frameshift_variant;DNAH9|p.P2650Hfs*2|2|0.29|ENSG00000007174|chr17:11784422-11784422|C/-|frameshift_variant;ENSG00000007174|ENST00000262442|DNAH9;ENSG00000105877|ENST00000409508|DNAH11;ENSG00000187775|ENST00000389840|DNAH17;nc|ENSG00000007174|Q9NYC9-2|DNAH9	85.16082228582465	0.07406536248925066	1				NaN	NaN	0	NaN	2340	3311	5649
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5654	20.871	NaN	2736.6	30	0	918.74	0.106				-1	 	0	40	399.2346939390208	796.4548349448417	2	399.23541259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	2341	3311	5649
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5655	20.873	NaN	2790.3	30	0	912.27	0.106			+	8586	EAYVYSRIQLL	11	55	452.2512269810357	1353.7318515433071	3	452.58575439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EAYVYSRIQLL_	REV__ENSG00000054793|ENST00000338821|ATP9A	43.650786325866115	0.5079891456189096	1				NaN	NaN	0	NaN	2342	3311	5649
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5656	20.874	NaN	1656.9	30	0	679.95	0.033	+			25842	LSEISNPK	8	50	444.24527536207364	886.4759977909473	2	444.2454528808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSEISNPK_	FOXO1|p.E369K|1|0.17|ENSG00000150907|chr13:40560386-40560386|C/T|missense_variant	44.116797842482775	0.6307669463330267	1				NaN	NaN	0	NaN	2343	3311	5649
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5668	20.9	NaN	31095	30	0	5054.8	0.214				-1	 	0	77	405.744845279096	809.475137624992	2	405.7450256347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	2352	3314	5667
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5669	20.904	NaN	13457	30	0	4219.6	0.106	+			1174	AENKEIQKL	9	70	358.20425821658984	1071.5909452499695	3	358.2046203613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AENKEIQKL_	ENSG00000106541|ENST00000419304|AGR2	78.26377905018397	0.10505600812668463	1				NaN	NaN	0	NaN	2353	3314	5667
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5670	20.905	NaN	5511.8	30	0	2613	0.106			+	40729	SVCLVCLFGLL	11	46	389.5471466651994	1165.6196105957983	3	389.5474548339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVCLVCLFGLL_	REV__ENST00000538862.6_1_12:6957987-6958203:-|nuORF	38.753607047826485	0.5749975102143227	1				NaN	NaN	0	NaN	2354	3314	5667
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5671	20.907	NaN	2469.8	30	0	452.81	0.106			+	16593	HGGFAIRH	8	45	447.7381869765985	893.461821019997	2	447.73773193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HGGFAIRH_	REV__SMC1A|p.R626H|1|0.58|ENSG00000072501|chrX:53405527-53405527|C/T|missense_variant	74.51659920185547	0.36926395944126233	1				NaN	NaN	0	NaN	2355	3314	5667
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5672	20.909	NaN	20953	30	0	5042.3	0.106			+	-1	VVFYISCHL	9	67	379.86447201669057	1136.5715866502717	3	379.8650207519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_VVFYISC(Carbamidomethyl (C))HL_	REV__tr|U7SSV8|U7SSV8_FUSNUDUF3307domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01391PE=4SV=1	35.61828744233558	0.47037581924408073	1				NaN	NaN	0	NaN	2356	3314	5667
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5673	20.911	NaN	1424.7	30	0	203.07	0.034				-1	MAKLSCLF	8	52	485.24757633898736	NaN	0	485.24755859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_MAKLSC(Carbamidomethyl (C))LF_	ENST00000602586.1_1_1:16545087-16552470:-|nuORF	28.2542754592877	1.7418937515398478	1				NaN	NaN	0	NaN	2357	3314	5667
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5674	20.911	NaN	1710.3	30	0	177.94	0.144	+			8055	DVFKILAAIL	10	42	368.2349761800337	NaN	0	367.900390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DVFKILAAIL_	ENSG00000128833|ENST00000261839|MYO5C;ENST00000558902.5_1_15:52548900-52571163:-|nuORF;ENST00000560809.5_1_15:52548900-52557395:-|nuORF;MYO5C|p.E1050Sfs*8|1|0.32|ENSG00000128833|chr15:52229192-52229192|C/-|frameshift_variant;MYO5C|p.I480Nfs*10|1|0.5|ENSG00000128833|chr15:52253414-52253415|-/T|frameshift_variant;MYO5C|p.L1151Wfs*19|1|0.17|ENSG00000128833|chr15:52223719-52223719|A/-|frameshift_variant;MYO5C|p.L933Hfs*33|1|0.04|ENSG00000128833|chr15:52237552-52237553|-/T|frameshift_variant;MYO5C|p.L933Sfs*35|1|0.04|ENSG00000128833|chr15:52237553-52237554|-/AAGTGGA|frameshift_variant;nc|ENSG00000128833|Q9NQX4-2|MYO5C	36.446750945000026	0.3805027428805705	1				NaN	NaN	0	NaN	2358	3314	5667
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5688	20.943	NaN	14446	30	0	2713.3	0.214	+			33053	REKETKALSL	10	68	392.23076812901155	1173.6704749872347	3	392.2311096191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_REKETKALSL_	ENSG00000100345|ENST00000216181|MYH9;ENSG00000133026|ENST00000360416|MYH10;ENSG00000133392|ENST00000300036|MYH11;nc|ENSG00000100345|P35579-2|MYH9;nc|ENSG00000133026|P35580-2|MYH10;nc|ENSG00000133026|P35580-3|MYH10;nc|ENSG00000133026|P35580-5|MYH10;nc|ENSG00000133026|P35580|MYH10;nc|ENSG00000133392|P35749-2|MYH11;nc|ENSG00000133392|P35749-3|MYH11;nc|ENSG00000133392|P35749-4|MYH11;SYNDIG1-MYH9|1|fusion	42.86426827375447	0.522752283233888	1				NaN	NaN	0	NaN	2369	3317	5687
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5689	20.947	NaN	6397.5	30	0	1517.1	0.036	+			29114	NTSDFQKLK	9	53	360.8613457110574	1079.5622077333724	3	360.8614196777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NTSDFQKLK_	ENSG00000204673|ENST00000344175|AKT1S1;nc|ENSG00000204673|Q96B36-2|AKT1S1;nc|ENSG00000204673|Q96B36-3|AKT1S1	29.14955571784316	0.5308295550522326	1				NaN	NaN	0	NaN	2370	3317	5687
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5701	20.972	NaN	37525	30	0	7127.4	0.214	+			33932	RSAFTVIRK	9	77	359.8888450010587	1076.6447056033762	3	359.8889465332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RSAFTVIRK_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	94.4091291819064	0.0524345700464502	1				NaN	NaN	0	NaN	2379	3320	5700
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5702	20.976	NaN	18696	30	0	3490.7	0.106				-1	SLQSCMQFQP	10	83	414.51499505372254	1240.5231557613677	3	414.515380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_SLQSC(Carbamidomethyl (C))M(Oxidation (M))QFQP_	ENSG00000111704|ENST00000229307|NANOG;nc|ENSG00000111704|Q9H9S0-2|NANOG;nc|ENSG00000176654|Q8N7R0|NANOGP1	27.047317107675042	0.6589519614906109	1				NaN	NaN	0	NaN	2380	3320	5700
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5703	20.978	NaN	8802	30	0	5059.1	0.106	+			11385	FLLSSARKR	9	59	539.3296098530463	1076.6446667728926	2	539.3302612304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FLLSSARKR_	ENST00000505667.5_1_4:169432617-169432773:+|nuORF	58.22992032128504	0.22837015374068087	1				NaN	NaN	0	NaN	2381	3320	5700
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5704	20.98	NaN	5341.3	30	0	715.87	0.106	+			35769	SEADKIKVA	9	63	480.7712361854329	959.5279194376658	2	480.7714538574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SEADKIKVA_	ENSG00000178035|ENST00000326739|IMPDH2;ENST00000466147.5_1_3:49062090-49062580:-|nuORF;ENST00000484872.1_1_3:49061926-49062670:-|nuORF	75.04331003522576	0.118981335847003	1				NaN	NaN	0	NaN	2382	3320	5700
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5705	20.982	NaN	2500.1	30	0	413.87	0.106				-1	TCMTVDLEA	9	49	499.7119692275496	997.4093855218993	2	499.7122497558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_TCM(Oxidation (M))TVDLEA_	ENSG00000138162|ENST00000369005|TACC2;nc|ENSG00000138162|O95359-1|TACC2;nc|ENSG00000138162|O95359-2|TACC2;nc|ENSG00000138162|O95359-3|TACC2;nc|ENSG00000138162|O95359-5|TACC2;nc|ENSG00000138162|O95359-6|TACC2	37.15910966729921	0.4535818937225704	1				NaN	NaN	0	NaN	2383	3320	5700
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5706	20.983	NaN	1365.9	30	0	261.51	0.106			+	60	AAASEAETQ	9	50	439.1987587523935	876.382964571587	2	439.19891357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AAASEAETQ_	REV__ENSG00000111752|ENST00000544916|PHC1;REV__ENST00000433847.2_1_12:9067399-9086462:+|nuORF;REV__ENST00000539928.1_1_12:9083252-9086563:+|nuORF;REV__PHC1|p.A848Dfs*59|1|0.09|ENSG00000111752|chr12:8937240-8937241|-/ACCAC|frameshift_variant;REV__PHC1|p.G884Vfs*21|1|0.41|ENSG00000111752|chr12:8937848-8937848|G/-|frameshift_variant	49.44154591367651	0.3095138337212152	1				NaN	NaN	0	NaN	2384	3320	5700
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5707	20.985	NaN	734.42	30	0	109.42	0.036			+	10701	EYYALPQAR	9	35	555.7855137733932	NaN	0	555.7855224609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EYYALPQAR_	REV__ENSG00000166133|ENST00000315616|RPUSD2	37.81151784470057	0.28666463014928195	1				NaN	NaN	0	NaN	2385	3320	5700
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5718	21.01	NaN	2484.3	30	0	367.59	0.213				-1	 	0	58	618.6039199753585	1852.7899305262754	3	618.604736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	2393	3323	5717
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5719	21.014	NaN	1599.7	30	0	327.52	0.106	+			34990	SAASATIVAAA	11	50	466.75553555431156	NaN	0	466.7553405761719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAASATIVAAA_	ENST00000311922.3_1_8:126442809-126443172:+|nuORF	52.936696900407355	0.2942262773185686	1				NaN	NaN	0	NaN	2394	3323	5717
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5720	21.016	NaN	2021	30	0	247.4	0.106			+	30168	PSGEGLLRH	9	36	322.51014623452875	964.5086093037862	3	322.5101318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PSGEGLLRH_	REV__ENST00000308511.8_1_8:22477609-22477870:+|nuORF	36.446750945000026	0.4619375763483977	1				NaN	NaN	0	NaN	2395	3323	5717
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5721	21.018	NaN	549.56	30	0	69.848	0.106	+			28405	NESGELQDI	9	31	502.7301784914234	NaN	0	502.7301330566406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NESGELQDI_	ENSG00000215203|ENST00000399770|GRXCR1	19.996771675451527	0.3693019437812985	1				NaN	NaN	0	NaN	2396	3323	5717
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5722	21.02	NaN	2994.1	30	0	949.34	0.106	+			707	AEARGRVRAL	10	40	366.8885047510347	1097.6436848533042	3	366.888427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEARGRVRAL_	ENSG00000171695|ENST00000302096|LKAAEAR1;nc|ENSG00000171695|Q8TD35-2|LKAAEAR1	22.579656572578934	0.6954366826851017	1				NaN	NaN	0	NaN	2397	3323	5717
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5723	21.021	NaN	1256.7	30	0	158.5	0.036	+			30459	QAARDALSLR	10	61	550.8135559276109	1099.6125589220217	2	550.814208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QAARDALSLR_	ENST00000297908.7_1_9:125026959-125027142:+|nuORF	53.08895987439943	0.42869529153390606	1				NaN	NaN	0	NaN	2398	3323	5717
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5724	21.022	NaN	5298.3	30	0	2564	0.143			+	17918	IGKAFGSVVT	10	30	326.85869813013795	977.5542649906139	3	326.8587951660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IGKAFGSVVT_	REV__tr|U7SSR6|U7SSR6_FUSNUDNAprotectingproteinDprAOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01464PE=3SV=1	21.9598887501803	0.7004979571547932	1				NaN	NaN	0	NaN	2399	3323	5717
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5735	21.049	NaN	7059.5	30	0	4295.6	0.214	+			35372	SAPSRATAL	9	47	437.24261844531134	872.4706839574227	2	437.2427673339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAPSRATAL_	ENSG00000155729|ENST00000359878|KCTD18;nc|ENSG00000155729|Q6PI47-3|KCTD18	56.43379154798735	0.2433427591689151	1				NaN	NaN	0	NaN	2407	3326	5734
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5736	21.053	NaN	1349	30	0	168.93	0.106	+			35034	SADKTVRVY	9	51	519.7822059557354	1037.5498589782708	2	519.7830200195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SADKTVRVY_	ENSG00000103994|ENST00000564754|ZNF106;nc|ENSG00000103994|Q9H2Y7-2|ZNF106;nc|ENSG00000103994|Q9H2Y7|ZNF106	62.107414245175825	0.1960472003779324	1				NaN	NaN	0	NaN	2408	3326	5734
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5737	21.055	NaN	3260.2	30	0	591.85	0.106	+			6007	AVMDNKNPTIK	11	67	615.8281842635402	1229.6418155938802	2	615.8294677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVMDNKNPTIK_	CKAP5|p.K1126Rfs*25|1|0.46|ENSG00000175216|chr11:46767609-46767609|T/-|frameshift_variant;CKAP5|p.V1971Lfs*42|1|0.03|ENSG00000175216|chr11:46744211-46744212|-/TTGAAAAAAAG|frameshift_variant;ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5	114.71003974875822	0.030349694290893875	1				NaN	NaN	0	NaN	2409	3326	5734
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5738	21.056	NaN	1499.1	30	0	537.9	0.106	+			51309	YSGLKAKIQ	9	50	504.29759680000626	1006.5806406668125	2	504.2976989746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YSGLKAKIQ_	ENSG00000163867|ENST00000357182|ZMYM6;ENST00000493328.5_1_1:35452707-35454621:-|nuORF;nc|ENSG00000163867|O95789-5|ZMYM6;ZMYM6|p.N1298Ifs*9|1|0.15|ENSG00000163867|chr1:34987189-34987189|T/-|frameshift_variant	60.11826168202944	0.21262886028301267	1				NaN	NaN	0	NaN	2410	3326	5734
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5739	21.058	NaN	2404.1	30	0	618.76	0.106	+			9659	ELSQNPMLL	9	60	522.7754527523682	NaN	0	522.7749633789062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ELSQNPMLL_	PRKDC|p.S1755N|1|0.2|ENSG00000253729|chr8:47877823-47877823|C/T|missense_variant	47.657333605630114	0.2228375344433429	1				NaN	NaN	0	NaN	2411	3326	5734
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5740	21.06	NaN	1852.4	30	0	725.61	0.036			+	8645	EDLEVFLST	9	51	526.760260059635	1051.50596718607	2	526.7614135742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EDLEVFLST_	REV__ENSG00000099968|ENST00000317582|BCL2L13;REV__ENST00000485631.1_1_22:18189492-18210297:+|nuORF;REV__nc|ENSG00000099968|Q9BXK5-4|BCL2L13	40.5726180659479	0.4135428067754104	1				NaN	NaN	0	NaN	2412	3326	5734
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5741	21.061	NaN	5132.8	30	0	1035.2	0.139	+			35802	SEAPGQRAL	9	54	464.74566001688845	927.4767671005769	2	464.7453918457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SEAPGQRAL_	ENSG00000114867|ENST00000346169|EIF4G1;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;ENST00000460829.5_1_3:184046782-184052693:+|nuORF;ENST00000478291.1_1_3:184049262-184049734:+|nuORF;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1	69.6276240434122	0.14239879520340665	1				NaN	NaN	0	NaN	2413	3326	5734
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5749	21.081	NaN	24170	30	0	4999.3	0.214	+			3068	ASFQSTSVK	9	65	477.7479385989569	953.4813242647139	2	477.7479248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASFQSTSVK_	ENSG00000050405|ENST00000341247|LIMA1;nc|ENSG00000050405|Q9UHB6-2|LIMA1;nc|ENSG00000050405|Q9UHB6-3|LIMA1;nc|ENSG00000050405|Q9UHB6-4|LIMA1;nc|ENSG00000050405|Q9UHB6-5|LIMA1	131.115847015877	0.014647977962315902	1				NaN	NaN	0	NaN	2418	3329	5748
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5750	21.084	NaN	7970	30	0	1915.4	0.106	+			37815	SMNANTITK	9	69	490.24778356891227	978.4810142046246	2	490.2472839355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SMNANTITK_	ENSG00000175467|ENST00000312397|SART1	125.68205650279488	0.017759985800556374	1				NaN	NaN	0	NaN	2419	3329	5748
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5751	21.086	NaN	4106.2	30	0	953.97	0.106	+			14959	GTMTGMLYK	9	59	517.2379540703901	1032.46135520758	2	517.23876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Oxidation (M)	_GTM(Oxidation (M))TGM(Oxidation (M))LYK_	ENSG00000178440|ENST00000651763|TIMM23B-AGAP6;ENSG00000204152|ENST00000651259|TIMM23B;ENSG00000265354|ENST00000580018|TIMM23;nc|ENSG00000204152|Q5SRD1-2|TIMM23B	98.62937762414208	0.04060045538121712	1				NaN	NaN	0	NaN	2420	3329	5748
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5752	21.088	NaN	4634.2	30	0	1676.2	0.106			+	-1	CLVKLDPLR	9	52	371.88793506412924	1112.6419757925878	3	371.8878173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_C(Carbamidomethyl (C))LVKLDPLR_	REV__ENSG00000112539|ENST00000230301|C6orf118	29.170058357718403	0.5306379469863586	1				NaN	NaN	0	NaN	2421	3329	5748
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5753	21.09	NaN	986.07	30	0	451.1	0.106				-1	 	0	25	323.2014134433527	644.3882739535054	2	323.2013854980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	2422	3329	5748
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5754	21.092	NaN	15224	30	0	9253.3	0.038	+			40883	SVFKPRTMQG	10	47	389.53733257922096	1165.590168337863	3	389.87200927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_SVFKPRTM(Oxidation (M))QG_	ENSG00000082068|ENST00000265107|WDR70;ENST00000511906.5_1_5:37379391-37721408:+|nuORF;WDR70|p.V333Sfs*15|1|0.33|ENSG00000082068|chr5:37605137-37605137|A/-|frameshift_variant	40.05817265558897	0.5486090488315611	1				NaN	NaN	0	NaN	2423	3329	5748
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5755	21.092	NaN	6172.8	30	0	1402.2	0.139	+			37102	SISSGPIQK	9	54	458.75828620198325	915.5020194707665	2	458.75775146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SISSGPIQK_	ENSG00000006611|ENST00000005226|USH1C;nc|ENSG00000006611|Q9Y6N9-2|USH1C;nc|ENSG00000006611|Q9Y6N9-3|USH1C;nc|ENSG00000006611|Q9Y6N9-4|USH1C;nc|ENSG00000006611|Q9Y6N9|USH1C	62.107414245175825	0.1960472003779324	1				NaN	NaN	0	NaN	2424	3329	5748
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5765	21.117	NaN	1999.2	30	0	342.87	0.214	+			3734	ATAAVTAAVK	10	62	451.76869725752846	901.5228415818569	2	451.7686767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATAAVTAAVK_	ENSG00000165476|ENST00000373758|REEP3;nc|ENSG00000165476|Q6NUK4-2|REEP3	101.45984612302182	0.07336148045341315	1				NaN	NaN	0	NaN	2431	3332	5764
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5766	21.121	NaN	7763.7	30	0	2312.2	0.106				-1	VTCSQVHFK	9	51	369.18655220268136	1104.5378272082442	3	369.186767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_VTC(Carbamidomethyl (C))SQVHFK_	ENSG00000174442|ENST00000307897|ZWILCH;nc|ENSG00000174442|Q9H900-2|ZWILCH	30.317721548370564	0.5199124245378496	1				NaN	NaN	0	NaN	2432	3332	5764
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5767	21.123	NaN	6790.7	30	0	3696.2	0.106				-1	FIDKNGETELC	11	55	663.3064941041432	1324.5984352750863	2	663.3076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_FIDKNGETELC(Carbamidomethyl (C))_	ENSG00000100591|ENST00000216479|AHSA1;ENST00000556369.1_3_14:77935388-77935589:+|nuORF	45.97224482568171	0.4762245054624163	1				NaN	NaN	0	NaN	2433	3332	5764
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5768	21.125	NaN	5175.1	30	0	492.59	0.106			+	-1	LKDMIENMKDG	11	58	442.54063652650393	1324.6000801797118	3	442.5406799316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Oxidation (M)	_LKDM(Oxidation (M))IENM(Oxidation (M))KDG_	REV__ENSG00000107949|ENST00000278100|BCCIP	31.068146907933308	0.6639116734509778	1				NaN	NaN	0	NaN	2434	3332	5764
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5769	21.126	NaN	1452.1	30	0	191.23	0.106	+			17676	IEKPVKEAM	9	51	522.7919064770416	1043.5692600208831	2	522.7918701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IEKPVKEAM_	ENSG00000012779|ENST00000374391|ALOX5;nc|ENSG00000012779|P09917-2|ALOX5;nc|ENSG00000012779|P09917-3|ALOX5	67.49366992349736	0.1516260258713357	1				NaN	NaN	0	NaN	2435	3332	5764
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5770	21.128	NaN	810.63	30	0	256.62	0.106			+	2654	AQLRSPVAT	9	41	471.7717451600998	941.5289373869996	2	471.77178955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AQLRSPVAT_	REV__nc|ENSG00000276717|A8MTI9|PRSS47P	32.81241826257853	0.4965981579233955	1				NaN	NaN	0	NaN	2436	3332	5764
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5771	21.13	NaN	5896.9	30	0	1593.3	0.039			+	4436	ATIKLDFVDKQ	11	53	426.5755321834305	1276.7047671504915	3	426.5757141113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATIKLDFVDKQ_	REV__ENSG00000129003|ENST00000644861|VPS13C;REV__nc|ENSG00000129003|Q709C8-2|VPS13C;REV__nc|ENSG00000129003|Q709C8-3|VPS13C;REV__nc|ENSG00000129003|Q709C8-4|VPS13C;REV__VPS13C|p.E2463Nfs*18|1|0.25|ENSG00000129003|chr15:61920157-61920157|C/-|frameshift_variant;REV__VPS13C|p.N3163Sfs*6|1|0.05|ENSG00000129003|chr15:61882732-61882733|-/TTATCATCAC|frameshift_variant;REV__VPS13C|p.P3597Lfs*3|1|0.26|ENSG00000129003|chr15:61868732-61868732|G/-|frameshift_variant	57.148748479083515	0.34890646465650643	1				NaN	NaN	0	NaN	2437	3332	5764
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5782	21.155	NaN	4185.3	30	0	1617.3	0.214			+	44381	TSLGSIEEIQN	11	51	397.533935546875	NaN	0	397.533935546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSLGSIEEIQN_	REV__ENSG00000137821|ENST00000260382|LRRC49;REV__ENST00000560691.5_1_15:71192806-71200991:+|nuORF;REV__ENST00000560980.5_1_15:71185191-71211425:+|nuORF;REV__LRRC49|p.L212*|1|0.43|ENSG00000137821|chr15:70919113-70919113|T/-|frameshift_variant;REV__LRRC49|p.P583Tfs*9|1|0.43|ENSG00000137821|chr15:71037214-71037215|-/A|frameshift_variant;REV__nc|ENSG00000137821|Q8IUZ0-2|LRRC49;REV__nc|ENSG00000137821|Q8IUZ0-3|LRRC49;REV__nc|ENSG00000137821|Q8IUZ0-4|LRRC49	34.08650109265054	0.41350691770670583	1				NaN	NaN	0	NaN	2445	3335	5781
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5783	21.159	NaN	1172.4	30	0	160.38	0.106	+			19252	KADSGLKIL	9	50	472.7924248450659	943.5702967569318	2	472.7917785644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KADSGLKIL_	ENST00000425839.1_1_6:30437447-30438005:+|nuORF	36.446750945000026	0.4619375763483977	1				NaN	NaN	0	NaN	2446	3335	5781
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5784	21.161	NaN	1344.2	30	0	175.42	0.106	+			42618	TAVCHTDAY	9	45	519.2208525155256	1036.4271520978511	2	519.2210693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_TAVC(Carbamidomethyl (C))HTDAY_	ENSG00000197894|ENST00000296412|ADH5;ENST00000507102.5_2_4:100003111-100009857:-|nuORF;ENST00000508511.5_1_4:99997418-100009857:-|nuORF;ENST00000512621.5_1_4:99993722-100006301:-|nuORF	84.9155231211612	0.07920012719736333	1				NaN	NaN	0	NaN	2447	3335	5781
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5785	21.163	NaN	1060	30	0	213.5	0.106	+			32462	QVLGPEKQ	8	49	449.7531874781668	NaN	0	449.75299072265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QVLGPEKQ_	ENSG00000105497|ENST00000262259|ZNF175	31.954861631926434	1.7418937515398478	1				NaN	NaN	0	NaN	2448	3335	5781
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5786	21.164	NaN	1143.8	30	0	240.18	0.106	+			50733	YEKDDKLTP	9	48	554.7796747949928	1107.5447966567856	2	555.2828979492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YEKDDKLTP_	ENSG00000092820|ENST00000367075|EZR	31.529811441608018	0.5085848003137583	1				NaN	NaN	0	NaN	2449	3335	5781
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5787	21.166	NaN	1515.9	30	0	427.8	0.036	+			32311	QTQRVLLEK	9	56	557.8320932943587	1113.6496336555174	2	557.8330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QTQRVLLEK_	ENSG00000139636|ENST00000267102|LMBR1L;ENST00000547670.5_1_12:49494396-49503620:-|nuORF;ENST00000550867.5_1_12:49494935-49504419:-|nuORF;ENST00000552879.5_1_12:49494935-49496886:-|nuORF;nc|ENSG00000139636|Q6UX01-2|LMBR1L;nc|ENSG00000139636|Q6UX01-3|LMBR1L;nc|ENSG00000139636|Q6UX01-4|LMBR1L;nc|ENSG00000139636|Q6UX01-5|LMBR1L	61.76455937419982	0.19890525308472518	1				NaN	NaN	0	NaN	2450	3335	5781
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5788	21.167	NaN	727.55	30	0	105.35	0.14			+	18718	ITGLLQGQ	8	38	415.2428283691406	NaN	0	415.2428283691406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ITGLLQGQ_	REV__ENSG00000095015|ENST00000399503|MAP3K1;REV__ENST00000469188.1_1_5:56183212-56183548:+|nuORF	37.15910966729921	1.7418937515398478	1				NaN	NaN	0	NaN	2451	3335	5781
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5799	21.192	NaN	2099.2	30	0	238.47	0.214	+			38540	SSEAPLVQK	9	56	479.7639123611305	957.513271789061	2	479.76318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSEAPLVQK_	ENSG00000054654|ENST00000555002|SYNE2;ENST00000557005.1_1_14:64490935-64514966:+|nuORF;nc|ENSG00000054654|Q8WXH0|SYNE2;SYNE2|p.A5240Qfs*5|1|0.07|ENSG00000054654|chr14:64152639-64152639|G/-|frameshift_variant;SYNE2|p.D3074Ffs*8|1|0.07|ENSG00000054654|chr14:64053132-64053133|-/TTTCTTTTTCAAATACTTG|frameshift_variant;SYNE2|p.F2563Ifs*28|1|0.34|ENSG00000054654|chr14:64051593-64051594|-/A|frameshift_variant;SYNE2|p.F2840Lfs*3|1|0.38|ENSG00000054654|chr14:64052427-64052427|T/-|frameshift_variant;SYNE2|p.F4992Lfs*13|1|0.39|ENSG00000054654|chr14:64140067-64140067|T/-|frameshift_variant;SYNE2|p.L5308Ifs*18|1|0.12|ENSG00000054654|chr14:64158750-64158751|GG/-|frameshift_variant;SYNE2|p.S6651Rfs*83|1|0.29|ENSG00000054654|chr14:64220596-64220597|-/G|frameshift_variant	95.81516180277367	0.04847050768394289	1				NaN	NaN	0	NaN	2459	3338	5798
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5800	21.196	NaN	1604.1	30	0	445.89	0.106	+			26669	LVFLNHCF	8	48	496.75587378252055	991.4971946318411	2	496.7576904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LVFLNHCF_	ENST00000554157.5_1_14:20757788-20760378:-|nuORF	54.76467175910256	0.5536104764165384	1				NaN	NaN	0	NaN	2460	3338	5798
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5801	21.198	NaN	2895	30	0	297.76	0.106	+			37332	SLEIPMLIP	9	55	506.79245360720324	1011.5703542812065	2	506.7927551269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLEIPMLIP_	ENSG00000141127|ENST00000268835|PRPSAP2;nc|ENSG00000141127|O60256-2|PRPSAP2;nc|ENSG00000141127|O60256-3|PRPSAP2;nc|ENSG00000141127|O60256-4|PRPSAP2	40.5726180659479	0.4135428067754104	1				NaN	NaN	0	NaN	2461	3338	5798
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5802	21.2	NaN	1576.9	30	0	188.31	0.106	+			16831	HPDSVSSSY	9	46	489.7119052251045	977.409257517009	2	489.71173095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HPDSVSSSY_	ENSG00000148396|ENST00000684901|SEC16A;nc|ENSG00000148396|O15027-2|SEC16A;nc|ENSG00000148396|O15027-3|SEC16A;nc|ENSG00000148396|O15027-4|SEC16A;nc|ENSG00000148396|O15027-5|SEC16A;SEC16A|p.P2155Hfs*25|1|0.25|ENSG00000148396|chr9:136447664-136447664|G/-|frameshift_variant;SEC16A|p.P597Rfs*18|1|0.07|ENSG00000148396|chr9:136475826-136475826|G/-|frameshift_variant	60.97194046774394	0.20551255781574032	1				NaN	NaN	0	NaN	2462	3338	5798
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5803	21.202	NaN	2228.6	30	0	1136.5	0.106	+			38895	SSPEKAASL	9	40	445.23500159884463	888.4554502644893	2	445.2347106933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSPEKAASL_	ENSG00000125505|ENST00000245615|MBOAT7;nc|ENSG00000125505|Q96N66-2|MBOAT7;nc|ENSG00000125505|Q96N66-3|MBOAT7	34.172542307311794	0.4838870758800184	1				NaN	NaN	0	NaN	2463	3338	5798
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5804	21.203	NaN	1664.8	30	0	436.94	0.037			+	24480	LGGRQTIKEI	10	44	372.2237854003906	NaN	0	372.2237854003906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LGGRQTIKEI_	REV__ENSG00000205221|ENST00000379242|VIT;REV__nc|ENSG00000205221|Q6UXI7-2|VIT;REV__nc|ENSG00000205221|Q6UXI7-5|VIT;REV__nc|ENSG00000205221|Q6UXI7|VIT	41.42661286455405	0.3598046802465243	1				NaN	NaN	0	NaN	2464	3338	5798
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5814	21.225	NaN	3058.7	30	0	673.68	0.214	+			15283	GTVAGAAVL	9	39	379.7237716082713	757.4329902833426	2	379.7241516113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTVAGAAVL_	ENSG00000160439|ENST00000415061|RDH13;ENST00000589305.5_1_19:55562362-55574430:-|nuORF	52.29916861842294	0.2778091507991977	1				NaN	NaN	0	NaN	2471	3341	5813
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5815	21.229	NaN	3900	30	0	530.18	0.106	+			45919	VAQRDPIIAK	10	49	370.89230462789726	1109.6550844838919	3	370.8927001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VAQRDPIIAK_	ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC;PRKDC|p.K3681Nfs*6|1|0.32|ENSG00000253729|chr8:47785174-47785177|TTCT/-|frameshift_variant;PRKDC|p.M3670*|1|0.5|ENSG00000253729|chr8:47785212-47785212|T/-|frameshift_variant;PRKDC|p.M3846Cfs*12|1|0.13|ENSG00000253729|chr8:47779047-47779047|T/-|frameshift_variant;PRKDC|p.M4020Cfs*2|1|0.31|ENSG00000253729|chr8:47776968-47776968|T/-|frameshift_variant;PRKDC|p.N3605Kfs*3|1|0.22|ENSG00000253729|chr8:47788993-47788994|-/T|frameshift_variant;PRKDC|p.N4037Ifs*15|1|0.17|ENSG00000253729|chr8:47776916-47776916|T/-|frameshift_variant;PRKDC|p.S3402Ifs*16|1|0.04|ENSG00000253729|chr8:47799302-47799303|-/AAACCGTGAGTTAGAGGAGGTAA|frameshift_variant;PRKDC|p.S4099Qfs*6|1|0.25|ENSG00000253729|chr8:47774265-47774265|A/-|frameshift_variant;PRKDC|p.T3268Pfs*7|1|0.5|ENSG00000253729|chr8:47803426-47803426|T/-|frameshift_variant;PRKDC|p.W3401Cfs*4|1|0.01|ENSG00000253729|chr8:47799304-47799305|-/AATGAATA|frameshift_variant	36.446750945000026	0.5818864909973037	1				NaN	NaN	0	NaN	2472	3341	5813
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5816	21.231	NaN	1182.5	30	0	115.3	0.036	+			16243	HEEKVFRAV	9	47	557.8039121161592	1113.5932712991182	2	557.80615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HEEKVFRAV_	ENSG00000095139|ENST00000264028|ARCN1;nc|ENSG00000095139|P48444-2|ARCN1	70.8162118820467	0.13725933411854815	1				NaN	NaN	0	NaN	2473	3341	5813
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5827	21.256	NaN	8254.4	30	0	2573.7	0.214				-1	 	0	47	411.7210464381401	821.4275399430802	2	411.7215881347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	2481	3344	5826
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5828	21.26	NaN	2528.2	30	0	641.85	0.106	+			45318	TVSESGTATLK	11	49	547.2900752737211	1092.565597614242	2	547.2913818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVSESGTATLK_	ENSG00000188112|ENST00000341865|C6orf132;nc|nan|Q5T0Z8-2|C6orf132;nc|nan|Q5T0Z8-4|C6orf132	86.88156770896713	0.11154061753057586	1				NaN	NaN	0	NaN	2482	3344	5826
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5829	21.262	NaN	2679.3	30	0	951	0.106	+			31280	QICDTYNQK	9	52	585.2661993047898	1168.5178456763795	2	585.267822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_QIC(Carbamidomethyl (C))DTYNQK_	ENSG00000165175|ENST00000614558|MID1IP1	67.49366992349736	0.1516260258713357	1				NaN	NaN	0	NaN	2483	3344	5826
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5830	21.263	NaN	1393.6	30	0	349.35	0.106	+			38166	SQCDSPYVTK	10	42	592.7660816327846	1183.517610332369	2	592.7671508789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_SQC(Carbamidomethyl (C))DSPYVTK_	ENSG00000102572|ENST00000539966|STK24;ENST00000481288.1_1_13:99161185-99171658:-|nuORF;nc|ENSG00000102572|Q9Y6E0|STK24	63.69406221917213	0.3322431690470481	1				NaN	NaN	0	NaN	2484	3344	5826
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5831	21.265	NaN	2643.3	30	0	554.13	0.106	+			44464	TSPQLDLK	8	63	451.25279613361465	900.4910393340293	2	451.2535705566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TSPQLDLK_	ENST00000317613.10_1_9:116303752-116304061:+|nuORF	66.42927471994793	0.4381325844043345	1				NaN	NaN	0	NaN	2485	3344	5826
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5832	21.267	NaN	1448.7	30	0	308.41	0.036	+			24758	LHTWLTVLK	9	46	555.8355157676627	1109.6564786021254	2	555.8363647460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LHTWLTVLK_	ENSG00000149534|ENST00000278888|MS4A2;ENST00000440896.2_1_11:59856214-59861079:+|nuORF	24.519189625965996	0.574102787014149	1				NaN	NaN	0	NaN	2486	3344	5826
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5833	21.268	NaN	1351.6	30	0	224.58	0.14			+	21662	KQADPPVIN	9	45	491.27190200375964	NaN	0	491.2727966308594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KQADPPVIN_	REV__ENSG00000203995|ENST00000371528|ZYG11A	30.317721548370564	0.32449924987115025	1				NaN	NaN	0	NaN	2487	3344	5826
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5847	21.299	NaN	13617	30	0	3366.2	0.214	+			4123	ATEHLSTLSEK	11	54	405.87833659314407	1214.6131803796322	3	405.8785705566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATEHLSTLSEK_	ENSG00000118137|ENST00000236850|APOA1	42.33807565288922	0.5259510355945483	1				NaN	NaN	0	NaN	2498	3347	5846
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5848	21.303	NaN	4912.2	30	0	1264.1	0.106	+			5052	ATSGVVAVR	9	50	430.2531326936394	858.4917124540788	2	430.25323486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATSGVVAVR_	ENSG00000074054|ENST00000696935|CLASP1;nc|ENSG00000074054|Q7Z460-2|CLASP1;nc|ENSG00000074054|Q7Z460-3|CLASP1;nc|ENSG00000074054|Q7Z460-4|CLASP1;nc|ENSG00000074054|Q7Z460-5|CLASP1;nc|ENSG00000074054|Q7Z460|CLASP1	101.60071028292904	0.0375685401170269	1				NaN	NaN	0	NaN	2499	3347	5846
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5849	21.305	NaN	42778	30	0	8099.9	0.106				-1	 	0	84	368.22010560237425	1101.6384874073228	3	368.22027587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	2500	3347	5846
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5850	21.306	NaN	1379.7	30	0	230.9	0.106	+			23397	LAAGTDFRS	9	41	469.24006667337096	936.4655804135419	2	469.2399597167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LAAGTDFRS_	ENSG00000185246|ENST00000355765|PRPF39;ENST00000424478.5_1_14:45565874-45584113:+|nuORF;ENST00000554429.5_1_14:45565874-45579180:+|nuORF	35.61828744233558	0.47037581924408073	1				NaN	NaN	0	NaN	2501	3347	5846
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5851	21.308	NaN	2492.8	30	0	1581.2	0.106	+			24421	LGAQNQTL	8	36	422.72958575922826	843.4446185852565	2	422.72979736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LGAQNQTL_	CON__P28800	38.80614096846853	0.6637206697844082	1				NaN	NaN	0	NaN	2502	3347	5846
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5852	21.31	NaN	2457.6	30	0	230.95	0.035			+	26467	LTKKFVHM	8	54	502.2922790442719	1002.5700051553438	2	502.2926940917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LTKKFVHM_	REV__ENSG00000137766|ENST00000260323|UNC13C;REV__UNC13C|p.D1718Rfs*8|1|0.19|ENSG00000137766|chr15:54500163-54500164|-/A|frameshift_variant;REV__UNC13C|p.F1525Lfs*3|2|0.44|ENSG00000137766|chr15:54333842-54333842|T/-|frameshift_variant;REV__UNC13C|p.P2056Qfs*10|1|0.33|ENSG00000137766|chr15:54622384-54622384|C/-|frameshift_variant;REV__UNC13C|p.W1592Gfs*7|1|0.85|ENSG00000137766|chr15:54393104-54393104|T/-|frameshift_variant	92.19062340807069	0.27083854825242376	1				NaN	NaN	0	NaN	2503	3347	5846
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5853	21.311	NaN	1746.7	30	0	216.61	0.138			+	43714	TKQQLSAV	8	51	437.75329207669637	873.4920312201928	2	437.75250244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TKQQLSAV_	REV__WWOX|p.K274Nfs*53|1|0.24|ENSG00000186153|chr16:78432515-78432515|A/-|frameshift_variant	35.61828744233558	0.6843154725607303	1				NaN	NaN	0	NaN	2504	3347	5846
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5863	21.334	NaN	6454.4	30	0	961.23	0.214	+			15905	HAANQSYQY	9	59	541.238105157141	1080.461657381082	2	541.239013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HAANQSYQY_	ENSG00000130402|ENST00000252699|ACTN4;ENST00000588618.5_1_19:39138385-39212431:+|nuORF;nc|ENSG00000130402|O43707-2|ACTN4;nc|ENSG00000130402|O43707-3|ACTN4	90.36981228632155	0.0638227155548745	1				NaN	NaN	0	NaN	2511	3350	5862
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5864	21.338	NaN	1268.9	30	0	143.24	0.106	+			31254	QHLTEAIKE	9	46	534.7876188205884	1067.5606847079766	2	534.7883911132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QHLTEAIKE_	CYP2J2|p.P474Qfs*6|1|0.16|ENSG00000134716|chr1:59893739-59893739|G/-|frameshift_variant;ENSG00000134716|ENST00000371204|CYP2J2;ENST00000466095.5_1_1:60366713-60392418:-|nuORF;ENST00000469406.5_1_1:60370173-60392418:-|nuORF;ENST00000492633.5_1_1:60370173-60378128:-|nuORF	44.377184641726394	0.36891676396732553	1				NaN	NaN	0	NaN	2512	3350	5862
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5865	21.34	NaN	1574.3	30	0	391.59	0.106	+			38426	SSAKPGPAL	9	49	414.23420067277436	826.4538484123487	2	414.23468017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSAKPGPAL_	ENSG00000186260|ENST00000571589|MRTFB;nc|ENSG00000186260|Q9ULH7-2|MRTFB;nc|ENSG00000186260|Q9ULH7-3|MRTFB;nc|ENSG00000186260|Q9ULH7-4|MRTFB;nc|ENSG00000186260|Q9ULH7|MRTFB	45.9519527083369	0.35044536499095585	1				NaN	NaN	0	NaN	2513	3350	5862
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5866	21.342	NaN	1029	30	0	149.17	0.106	+			33933	RSAFTVIRK	9	36	359.8888450010587	1076.6447056033762	3	359.8888854980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RSAFTVIRK_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	30.568863376406313	0.5175653706841606	1				NaN	NaN	0	NaN	2514	3350	5862
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5867	21.343	NaN	1029.4	30	0	128.41	0.106			+	589	ADLGTQNL	8	43	416.21382169582506	NaN	0	416.2138977050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ADLGTQNL_	REV__ENSG00000173821|ENST00000582970|RNF213;REV__ENST00000411702.7_1_17:78356744-78367295:+|nuORF;REV__ENST00000427003.7_1_17:78356226-78367295:+|nuORF;REV__ENST00000560083.1_1_17:78362921-78367295:+|nuORF;REV__nc|ENSG00000173821|Q63HN8-4|RNF213;REV__nc|ENSG00000173821|Q63HN8-6|RNF213;REV__nc|ENSG00000173821|Q63HN8|RNF213	51.33545320467046	1.7418937515398478	1				NaN	NaN	0	NaN	2515	3350	5862
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5868	21.345	NaN	858.29	30	0	197.13	0.106			+	24810	LINELGNLA	9	32	478.77385858037445	955.5331642275489	2	478.7737121582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LINELGNLA_	REV__ENSG00000025800|ENST00000373625|KPNA6;REV__ENSG00000114030|ENST00000344337|KPNA1;REV__ENSG00000196911|ENST00000368564|KPNA5	51.33545320467046	0.2872990594074956	1				NaN	NaN	0	NaN	2516	3350	5862
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5869	21.347	NaN	1311.6	30	0	450.75	0.036			+	43406	TGINAVAHIR	10	26	351.2063532892783	NaN	0	351.2063903808594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TGINAVAHIR_	REV__ENSG00000131018|ENST00000367255|SYNE1;REV__ENST00000461872.6_1_6:152697909-152949466:-|nuORF;REV__nc|ENSG00000131018|Q8NF91-10|SYNE1;REV__nc|ENSG00000131018|Q8NF91-4|SYNE1;REV__nc|ENSG00000131018|Q8NF91-5|SYNE1;REV__nc|ENSG00000131018|Q8NF91-6|SYNE1;REV__nc|ENSG00000131018|Q8NF91-7|SYNE1;REV__SYNE1|p.A3854Lfs*20|1|0.4|ENSG00000131018|chr6:152352048-152352048|T/-|frameshift_variant;REV__SYNE1|p.E428Rfs*3|1|0.26|ENSG00000131018|chr6:152483153-152483154|-/CT|frameshift_variant;REV__SYNE1|p.E4738Kfs*25|1|0.12|ENSG00000131018|chr6:152330474-152330474|T/-|frameshift_variant;REV__SYNE1|p.E5862Gfs*83|1|0.12|ENSG00000131018|chr6:152300729-152300738|CCAGACTCCT/-|frameshift_variant;REV__SYNE1|p.F1451Nfs*13|1|0.06|ENSG00000131018|chr6:152433905-152433906|-/TT|frameshift_variant;REV__SYNE1|p.G6773Wfs*7|1|0.44|ENSG00000131018|chr6:152236186-152236187|-/A|frameshift_variant;REV__SYNE1|p.I2756*|1|0.12|ENSG00000131018|chr6:152387293-152387293|T/-|frameshift_variant;REV__SYNE1|p.K3606Sfs*5|1|0.25|ENSG00000131018|chr6:152354768-152354768|T/-|frameshift_variant;REV__SYNE1|p.K6871Rfs*22|2|0.52|ENSG00000131018|chr6:152233881-152233881|T/-|frameshift_variant;REV__SYNE1|p.L8283Pfs*8|1|0.19|ENSG00000131018|chr6:152148173-152148174|-/G|frameshift_variant;REV__SYNE1|p.M2832Nfs*53|1|0.25|ENSG00000131018|chr6:152385831-152385832|-/T|frameshift_variant;REV__SYNE1|p.M5602Nfs*13|2|0.32|ENSG00000131018|chr6:152310779-152310780|-/T|frameshift_variant;REV__SYNE1|p.N2333Kfs*2|1|0.32|ENSG00000131018|chr6:152401168-152401169|-/T|frameshift_variant;REV__SYNE1|p.S1244Ffs*10|1|0.17|ENSG00000131018|chr6:152444519-152444520|-/G|frameshift_variant;REV__SYNE1|p.S2126Pfs*10|1|0.33|ENSG00000131018|chr6:152409564-152409564|A/-|frameshift_variant;REV__SYNE1|p.V8635Sfs*12|1|0.15|ENSG00000131018|chr6:152133375-152133375|T/-|frameshift_variant	21.9598887501803	0.4201028297492154	1				NaN	NaN	0	NaN	2517	3350	5862
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5880	21.372	NaN	38314	30	0	14657	0.214	+			1810	AIFQGKLEKK	10	70	387.9042974462714	1160.6910629390143	3	387.9043884277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AIFQGKLEKK_	ENSG00000118322|ENST00000327245|ATP10B	74.1650062923329	0.2432923583094885	1				NaN	NaN	0	NaN	2525	3353	5879
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5881	21.376	NaN	1956.2	30	0	517.11	0.106			+	21005	KKGTAYQVL	9	57	504.29759680000626	1006.5806406668125	2	504.298095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KKGTAYQVL_	REV__ENSG00000198301|ENST00000356260|SDAD1;REV__ENST00000395710.5_1_4:76871905-76902632:-|nuORF;REV__ENST00000513089.5_1_4:76886972-76894529:-|nuORF;REV__nc|ENSG00000198301|Q9NVU7-2|SDAD1;REV__SDAD1|p.K275Rfs*15|1|0.22|ENSG00000198301|chr4:75970368-75970368|T/-|frameshift_variant	42.396135135203025	0.392153681582562	1				NaN	NaN	0	NaN	2526	3353	5879
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5882	21.378	NaN	3502.8	30	0	239.37	0.106				-1	YYCCFLRGRQ	10	61	474.88322975427224	1421.6278598630167	3	475.2176818847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_YYC(Carbamidomethyl (C))C(Carbamidomethyl (C))FLRGRQ_	ENST00000350499.6_1_9:135765358-135765451:+|nuORF	35.15202426646627	0.5927656479315102	1				NaN	NaN	0	NaN	2527	3353	5879
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5883	21.38	NaN	2015.5	30	0	237.06	0.106			+	9641	ELRRFGQA	8	49	488.7690696463585	NaN	0	488.7698974609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ELRRFGQA_	REV__ENSG00000006015|ENST00000358607|REX1BD;REV__ENST00000598375.5_1_19:18699611-18699888:+|nuORF;REV__nc|ENSG00000006015|Q96EN9-3|REX1BD	55.50420428727701	1.7418937515398478	1				NaN	NaN	0	NaN	2528	3353	5879
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5884	21.381	NaN	2110.1	30	0	173.75	0.038	+			28707	NNIDTMAKALT	11	53	397.8716446589215	NaN	0	397.8722839355469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NNIDTMAKALT_	ENSG00000244476|ENST00000472091|ERVFRD-1	38.714083909724	0.3928837412686107	1				NaN	NaN	0	NaN	2529	3353	5879
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5893	21.403	NaN	8504.9	30	0	1894.7	0.214	+			4894	ATQGATEIVK	10	65	509.2819715738539	1016.5493902145079	2	509.2821960449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATQGATEIVK_	ENSG00000104321|ENST00000262209|TRPA1;TRPA1|p.G505Rfs*7|1|0.38|ENSG00000104321|chr8:72055452-72055453|-/T|frameshift_variant;TRPA1|p.L1023Ffs*15|1|0.42|ENSG00000104321|chr8:72023894-72023895|-/A|frameshift_variant;TRPA1|p.N377Ifs*25|1|0.08|ENSG00000104321|chr8:72056981-72056982|-/AAACTAATTTTGTTTATTA|frameshift_variant;TRPA1|p.T673Hfs*23|1|0.45|ENSG00000104321|chr8:72046557-72046557|T/-|frameshift_variant;TRPA1|p.Y327*|1|0.36|ENSG00000104321|chr8:72059399-72059402|TAAA/-|frameshift_variant	100.81924332030881	0.07526389463299563	1				NaN	NaN	0	NaN	2535	3356	5892
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5894	21.407	NaN	1111.4	30	0	370.41	0.106			+	31710	QNQVHGQLE	9	45	526.760260059635	1051.50596718607	2	526.761474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QNQVHGQLE_	REV__ENST00000551203.1_1_2:74348047-74348155:+|nuORF	23.04248740728303	0.5879033540491928	1				NaN	NaN	0	NaN	2536	3356	5892
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5895	21.408	NaN	1479.8	30	0	303.26	0.034	+			43683	TKETSKIQ	8	44	467.7645918986747	NaN	0	467.76434326171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TKETSKIQ_	ENSG00000169064|ENST00000675490|ZBBX;nc|ENSG00000169064|A8MT70-3|ZBBX;nc|ENSG00000169064|A8MT70|ZBBX	32.81241826257853	1.7418937515398478	1				NaN	NaN	0	NaN	2537	3356	5892
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5904	21.428	NaN	4236	30	0	686.46	0.214	+			15290	GTVDCVQAR	9	71	474.7314898746618	947.4484268161236	2	474.7313537597656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTVDCVQAR_	ENSG00000150593|ENST00000280154|PDCD4;ENST00000489049.5_1_10:112647518-112650449:+|nuORF;nc|ENSG00000150593|Q53EL6-2|PDCD4	82.7504851949679	0.08565546331141553	1				NaN	NaN	0	NaN	2543	3359	5903
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5905	21.432	NaN	2113.3	30	0	221.08	0.106	+			49232	VVNKVPLTGK	10	57	527.8350585662155	1053.6555641992309	2	527.8355102539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVNKVPLTGK_	ENSG00000151135|ENST00000280756|TMEM263	72.2432373244024	0.2589930451692646	1				NaN	NaN	0	NaN	2544	3359	5903
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5906	21.434	NaN	1405.2	30	0	287.3	0.036			+	22469	KTMAPHNSPL	10	48	548.2841118663638	1094.5536707995275	2	548.2853393554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KTMAPHNSPL_	REV__ENSG00000141198|ENST00000575882|TOM1L1;REV__nc|ENSG00000141198|O75674-3|TOM1L1	33.921630207806714	0.6028135429846169	1				NaN	NaN	0	NaN	2545	3359	5903
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5912	21.45	NaN	1082.7	30	0	312.13	0.214	+			10586	EYKKAKLQ	8	40	504.29759680000626	1006.5806406668125	2	504.2989807128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EYKKAKLQ_	tr|U7SGL3|U7SGL3_FUSNUOutermembraneeffluxproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02229PE=3SV=1	26.69291269510374	0.7532304684939817	1				NaN	NaN	0	NaN	2548	3362	5911
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5913	21.454	NaN	4147.8	30	0	738.75	0.106	+			967	AEKAVTKEEF	10	51	384.5361320701507	1150.5865668106521	3	384.536376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEKAVTKEEF_	ENSG00000168028|ENST00000301821|RPSA;ENST00000478027.2_1_3:39450050-39453856:+|nuORF;nc|ENSG00000288920|A0A8I5KQE6|RPSA2	30.317721548370564	0.6322445173429027	1				NaN	NaN	0	NaN	2549	3362	5911
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5914	21.456	NaN	6267	30	0	2880.2	0.106	+			18616	ISSLKDLITK	10	38	373.232685204193	1116.676226212779	3	373.23321533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ISSLKDLITK_	AKAP9|p.Q3083Nfs*28|1|0.15|ENSG00000127914|chr7:92089389-92089390|-/TGAATATCAAGCAGCTATGGAATGCC|frameshift_variant;ENSG00000127914|ENST00000356239|AKAP9;nc|ENSG00000127914|Q99996-1|AKAP9;nc|ENSG00000127914|Q99996-3|AKAP9;nc|ENSG00000127914|Q99996-5|AKAP9;nc|ENSG00000127914|Q99996-6|AKAP9	23.52269567125451	0.6877354443478558	1				NaN	NaN	0	NaN	2550	3362	5911
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5915	21.457	NaN	1367.4	30	0	289.74	0.036	+			22624	KTVDGALVAAK	11	46	536.8216236058194	1071.6286942784386	2	536.8232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTVDGALVAAK_	ENST00000461436.1_1_3:152017982-152019737:+|nuORF	56.632244143249146	0.3535169766007185	1				NaN	NaN	0	NaN	2551	3362	5911
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5922	21.475	NaN	1649.1	30	0	411.99	0.214	+			48663	VTSSVSTLK	9	46	461.26596941556926	920.5173858979385	2	461.2662048339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTSSVSTLK_	ENSG00000186260|ENST00000571589|MRTFB;nc|ENSG00000186260|Q9ULH7-4|MRTFB;nc|ENSG00000186260|Q9ULH7|MRTFB	40.77816245573522	0.41113185337114944	1				NaN	NaN	0	NaN	2555	3365	5921
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5923	21.479	NaN	1286	30	0	156.95	0.034			+	40458	STVRHARF	8	56	487.2700794716778	NaN	0	487.2692565917969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STVRHARF_	REV__ENSG00000164898|ENST00000297534|FMC1;REV__nc|ENSG00000164898|Q96HJ9-2|FMC1	30.503639358989545	1.7418937515398478	1				NaN	NaN	0	NaN	2556	3365	5921
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5932	21.499	NaN	913.07	30	0	121.8	0.143	+			34438	RTVPVGGVVK	10	50	506.3200075286089	NaN	0	506.3199768066406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTVPVGGVVK_	ENSG00000261236|ENST00000569669|BOP1;nc|ENSG00000261236|Q14137-2|BOP1	32.75053402867276	0.3926392905881664	1				NaN	NaN	0	NaN	2562	3368	5931
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5938	21.516	NaN	3357.8	30	0	504.39	0.214	+			1021	AEKLGGSAV	9	53	416.232003733021	830.449454532842	2	416.2320251464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEKLGGSAV_	ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65622809-65623088:-|nuORF	63.53385203322761	0.18415635464017938	1				NaN	NaN	0	NaN	2565	3371	5937
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5939	21.52	NaN	6913.1	30	0	4065.9	0.106			+	45369	TVTEKKIR	8	36	325.5379023441772	973.5918776327317	3	325.5381164550781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVTEKKIR_	REV__ENST00000481894.1_1_1:115138166-115167938:-|nuORF	30.503639358989545	0.7238069182250283	1				NaN	NaN	0	NaN	2566	3371	5937
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5940	21.522	NaN	3574.5	30	0	376.42	0.106	+			44841	TTTGHLIYK	9	61	517.2871569825771	1032.5597610319542	2	517.2887573242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TTTGHLIYK_	EEF1A1|p.P263Lfs*27|1|0.36|ENSG00000156508|chr6:73518595-73518595|G/-|frameshift_variant;EEF1A2|p.T239Hfs*50|1|0.26|ENSG00000101210|chr20:63493194-63493195|-/G|frameshift_variant;EEF1A2|p.T239Rfs*40|1|0.31|ENSG00000101210|chr20:63493195-63493195|G/-|frameshift_variant;ENSG00000101210|ENST00000217182|EEF1A2;ENSG00000156508|ENST00000309268|EEF1A1;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	87.69643885390035	0.07135982304947239	1				NaN	NaN	0	NaN	2567	3371	5937
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5941	21.523	NaN	1636.8	30	0	306.46	0.037			+	46749	VGSIAPVP	8	30	370.2207758983191	NaN	0	370.2212219238281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VGSIAPVP_	REV__ENST00000305123.5_1_2:227662067-227662256:-|nuORF;REV__IRS1|p.P368Rfs*95|1|0.18|ENSG00000169047|chr2:226797636-226797636|G/-|frameshift_variant	29.841539824830324	1.7418937515398478	1				NaN	NaN	0	NaN	2568	3371	5937
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5946	21.538	NaN	1442.9	30	0	136.93	0.144				-1	LSCVSAARVL	10	40	359.20166919549393	NaN	0	359.2017517089844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_LSC(Carbamidomethyl (C))VSAARVL_	ENST00000466936.5_1_8:38854393-38854555:+|nuORF	42.86426827375447	0.3507156137006061	1				NaN	NaN	0	NaN	2570	3374	5945
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5955	21.561	NaN	12521	30	0	1606.9	0.214	+			6196	AVQRTLLEK	9	73	529.3214040935324	1056.6282552538646	2	529.3223876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVQRTLLEK_	ENSG00000002586|ENST00000381192|CD99;ENST00000381177.6_1_X:2656215-2658842:+|nuORF;nc|ENSG00000292348|P14209-3|CD99	131.61620852596164	0.014413238321579053	1				NaN	NaN	0	NaN	2576	3377	5954
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5956	21.565	NaN	2237.9	30	0	288.58	0.106	+			41933	SVVQSGQLK	9	58	473.27173343314627	NaN	0	473.2713928222656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVVQSGQLK_	ENGASE|p.S611Gfs*22|1|0.26|ENSG00000167280|chr17:79085943-79085950|CTGCCAGC/-|frameshift_variant;ENGASE|p.T547Hfs*45|1|0.16|ENSG00000167280|chr17:79085274-79085275|-/C|frameshift_variant;ENGASE|p.T547Pfs*14|2|0.35|ENSG00000167280|chr17:79085275-79085275|C/-|frameshift_variant;ENSG00000167280|ENST00000579016|ENGASE;nc|ENSG00000167280|Q8NFI3-2|ENGASE;nc|ENSG00000167280|Q8NFI3-3|ENGASE	41.42661286455405	0.26577678759562784	1				NaN	NaN	0	NaN	2577	3377	5954
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5957	21.567	NaN	36819	30	0	13595	0.106	+			6197	AVQRTLLEK	9	62	353.21672747135005	1056.6283530142503	3	353.216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVQRTLLEK_	ENSG00000002586|ENST00000381192|CD99;ENST00000381177.6_1_X:2656215-2658842:+|nuORF;nc|ENSG00000292348|P14209-3|CD99	56.43379154798735	0.2433427591689151	1				NaN	NaN	0	NaN	2578	3377	5954
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5958	21.569	NaN	1887.1	30	0	493.06	0.106	+			38701	SSKLSEKS	8	43	433.23473319633683	864.4549134594737	2	433.23480224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSKLSEKS_	ENSG00000152193|ENST00000282003|OBI1	58.78195531508484	0.5138399468736706	1				NaN	NaN	0	NaN	2579	3377	5954
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5959	21.571	NaN	8689.1	30	0	3214.8	0.106			+	1632	AGNKKIEK	8	64	444.2687325582825	886.5229121833651	2	444.2687072753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AGNKKIEK_	REV__ENSG00000197386|ENST00000355072|HTT;REV__HTT|p.H2238Ffs*6|1|0.28|ENSG00000197386|chr4:3212643-3212644|CA/-|frameshift_variant;REV__HTT|p.N699Mfs*9|2|0.17|ENSG00000197386|chr4:3131390-3131390|A/-|frameshift_variant;REV__HTT|p.P1176Lfs*3|1|0.18|ENSG00000197386|chr4:3154316-3154316|C/-|frameshift_variant;REV__HTT|p.P2413Hfs*44|1|0.6|ENSG00000197386|chr4:3217944-3217944|C/-|frameshift_variant	133.8126618989323	0.23527224284755519	1				NaN	NaN	0	NaN	2580	3377	5954
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5960	21.572	NaN	1755.4	30	0	288.69	0.038	+			23187	KWRGSIYKL	9	35	384.22803047936173	NaN	0	384.2278747558594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KWRGSIYKL_	BEST3|p.L258Wfs*33|1|0.3|ENSG00000127325|chr12:69677010-69677010|A/-|frameshift_variant;ENSG00000127325|ENST00000330891|BEST3;nc|ENSG00000127325|Q8N1M1-1|BEST3	37.81151784470057	0.28666463014928195	1				NaN	NaN	0	NaN	2581	3377	5954
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5961	21.573	NaN	4404	30	0	1537.6	0.141				-1	QNFKFCLI	8	47	357.18880482605607	1068.5445850783683	3	357.1888732910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_QNFKFC(Carbamidomethyl (C))LI_	ENST00000238831.8_1_2:32530875-32530977:+|nuORF	50.0245360154114	0.5941082100236891	1				NaN	NaN	0	NaN	2582	3377	5954
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5972	21.599	NaN	63467	30	0	12816	0.214	+			15222	GTSSVIVSR	9	71	453.25595956635993	904.4973661995199	2	453.255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTSSVIVSR_	ENSG00000072803|ENST00000517395|FBXW11;nc|ENSG00000072803|Q9UKB1-2|FBXW11;nc|ENSG00000072803|Q9UKB1-3|FBXW11;nc|ENSG00000072803|Q9UKB1|FBXW11	163.1509380574825	0.003936019289634439	1				NaN	NaN	0	NaN	2590	3380	5971
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5973	21.602	NaN	11124	30	0	8099	0.106			+	9367	EIYEIHAQLV	10	51	405.5522036968217	1213.6347816906652	3	405.88671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EIYEIHAQLV_	REV__ENSG00000178038|ENST00000318962|ALS2CL;REV__ENST00000431015.5_2_3:46722577-46730936:-|nuORF;REV__ENST00000450172.5_2_3:46722734-46730936:-|nuORF	29.14955571784316	0.6417842315402807	1				NaN	NaN	0	NaN	2591	3380	5971
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5974	21.604	NaN	2032.5	30	0	402.21	0.106	+			15284	GTVAGAAVL	9	41	379.7237716082713	757.4329902833426	2	379.723876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTVAGAAVL_	ENSG00000160439|ENST00000415061|RDH13;ENST00000589305.5_1_19:55562362-55574430:-|nuORF	52.29916861842294	0.2778091507991977	1				NaN	NaN	0	NaN	2592	3380	5971
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5975	21.606	NaN	6777.8	30	0	1015.1	0.106	+			22980	KVRTLIEQ	8	68	493.8031112997762	985.5916696663525	2	493.80255126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KVRTLIEQ_	ENSG00000136152|ENST00000349995|COG3;nc|ENSG00000136152|Q96JB2-2|COG3	91.26522074875469	0.27363999379356707	1				NaN	NaN	0	NaN	2593	3380	5971
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5976	21.608	NaN	1788.6	30	0	415.66	0.106			+	47615	VSAADKPTK	9	41	458.7583801962288	915.5022074592576	2	458.7581787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSAADKPTK_	REV__ENSG00000010017|ENST00000011619|RANBP9	45.97224482568171	0.3502073465782774	1				NaN	NaN	0	NaN	2594	3380	5971
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5977	21.609	NaN	1405.4	30	0	318.97	0.106			+	46731	VGPPKGPVPR	10	33	335.2056206259288	NaN	0	335.2054443359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VGPPKGPVPR_	REV__ENSG00000106829|ENST00000376552|TLE4;REV__ENST00000462803.5_1_9:82286241-82340056:+|nuORF;REV__nc|ENSG00000106829|Q04727-2|TLE4;REV__nc|ENSG00000106829|Q04727-3|TLE4;REV__nc|ENSG00000106829|Q04727-4|TLE4;REV__TLE4|p.S576Ifs*53|1|0.1|ENSG00000106829|chr9:79720180-79720181|-/ATAAAAG|frameshift_variant	17.468008924990375	0.4201028297492154	1				NaN	NaN	0	NaN	2595	3380	5971
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5978	21.611	NaN	945.54	30	0	148.37	0.035			+	25280	LNRYVSEV	8	47	490.26336669921875	NaN	0	490.26336669921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LNRYVSEV_	REV__tr|U7SPC3|U7SPC3_FUSNUAminotransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01811PE=3SV=1	37.15910966729921	1.7418937515398478	1				NaN	NaN	0	NaN	2596	3380	5971
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5990	21.636	NaN	16642	30	0	3293.7	0.214				-1	 	0	63	565.9151246072907	1694.723544422072	3	565.9155883789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	2605	3383	5989
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5991	21.64	NaN	4811.3	30	0	737.25	0.106			+	48658	VTSSKRLLQ	9	61	516.3135722623252	1030.6125915914504	2	516.3141479492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTSSKRLLQ_	REV__ENSG00000176771|ENST00000409261|NCKAP5	96.0336014099291	0.047854655524928534	1				NaN	NaN	0	NaN	2606	3383	5989
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5992	21.642	NaN	1110.2	30	0	204.59	0.106			+	35678	SDGKKFSN	8	38	441.71893310546875	NaN	0	441.71893310546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SDGKKFSN_	REV__ENSG00000097046|ENST00000234626|CDC7	25.450171626174864	1.7418937515398478	1				NaN	NaN	0	NaN	2607	3383	5989
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5993	21.644	NaN	1624.3	30	0	315.62	0.033	+			31700	QNMAVALQ	8	54	437.72584722733427	873.4371415214686	2	437.7254333496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QNMAVALQ_	ENSG00000143669|ENST00000389793|LYST	40.5726180659479	0.6527593143185008	1				NaN	NaN	0	NaN	2608	3383	5989
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6004	21.667	NaN	2458.3	30	0	228.16	0.214	+			16425	HESDVKIVA	9	60	499.26912568481345	996.5236984364269	2	499.26953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HESDVKIVA_	ENSG00000165238|ENST00000427277|WNK2;nc|ENSG00000165238|Q9Y3S1-2|WNK2;nc|ENSG00000165238|Q9Y3S1-3|WNK2;nc|ENSG00000165238|Q9Y3S1-4|WNK2;nc|ENSG00000165238|Q9Y3S1|WNK2;WNK2|p.S1424Pfs*5|1|0.34|ENSG00000165238|chr9:93288908-93288908|C/-|frameshift_variant;WNK2|p.T1980Lfs*12|2|0.16|ENSG00000165238|chr9:93297965-93297965|C/-|frameshift_variant	88.17693792209575	0.07000514020414955	1				NaN	NaN	0	NaN	2616	3386	6003
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6005	21.671	NaN	4105.8	30	0	757.66	0.106	+			7007	CRRCIFAL	8	41	365.85622198981315	1094.5468365696395	3	365.8563537597656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))RRC(Carbamidomethyl (C))IFAL_	ENSG00000119403|ENST00000373896|PHF19;nc|ENSG00000119403|Q5T6S3-2|PHF19	40.5726180659479	0.6527593143185008	1				NaN	NaN	0	NaN	2617	3386	6003
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6006	21.673	NaN	2908.4	30	0	195.93	0.106	+			690	AEALEKKFNF	10	53	399.5483427277935	1195.6231987835806	3	399.54888916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEALEKKFNF_	tr|U7SQT4|U7SQT4_FUSNUtypeIsite-specificdeoxyribonucleaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01572PE=3SV=1	26.063383197487333	0.6669871633831898	1				NaN	NaN	0	NaN	2618	3386	6003
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6007	21.675	NaN	1037.5	30	0	206.26	0.106				-1	LRRMKEDVLQ	10	38	435.24462890625	NaN	0	435.24462890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_LRRM(Oxidation (M))KEDVLQ_	ENSG00000095564|ENST00000265990|BTAF1;nc|ENSG00000095564|O14981-2|BTAF1	18.531049691330335	0.4201028297492154	1				NaN	NaN	0	NaN	2619	3386	6003
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6008	21.676	NaN	1113.1	30	0	139.7	0.106	+			16011	HASDQNYNY	9	41	556.2253243122693	1110.4360956913386	2	556.225830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HASDQNYNY_	ENSG00000168813|ENST00000355898|ZNF507;ENST00000586664.1_1_19:32873361-32873986:+|nuORF;ZNF507|p.L875Sfs*7|1|0.15|ENSG00000168813|chr19:32382841-32382842|-/T|frameshift_variant	42.86426827375447	0.38666266728046506	1				NaN	NaN	0	NaN	2620	3386	6003
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6009	21.678	NaN	584.8	30	0	112.63	0.037			+	31573	QLQRPEGKTE	10	26	593.3138427734375	NaN	0	593.3138427734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QLQRPEGKTE_	REV__ENSG00000253731|ENST00000517434|PCDHGA6;REV__nc|ENSG00000253731|Q9Y5G7-2|PCDHGA6	22.579656572578934	0.4201028297492154	1				NaN	NaN	0	NaN	2621	3386	6003
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6020	21.704	NaN	17351	30	0	1974.7	0.214			+	-1	KPMSRLAK	8	73	473.778229564069	945.5419061949381	2	473.7781982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_KPM(Oxidation (M))SRLAK_	REV__nc|ENSG00000117090|Q13291-4|SLAMF1	74.25504064058377	0.37144338840759816	1				NaN	NaN	0	NaN	2629	3389	6019
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6021	21.707	NaN	5463.7	30	0	656.96	0.106			+	9074	EGGSVQKLI	9	62	465.76623032275785	929.5179077123157	2	465.7663269042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EGGSVQKLI_	REV__ENSG00000164190|ENST00000282516|NIPBL;REV__nc|ENSG00000164190|Q6KC79-2|NIPBL;REV__NIPBL|p.E1635K|1|0.05|ENSG00000164190|chr5:37017145-37017145|G/A|missense_variant;REV__NIPBL|p.I2776Lfs*3|1|0.17|ENSG00000164190|chr5:37064797-37064797|A/-|frameshift_variant;REV__NIPBL|p.L2220Ffs*3|1|0.21|ENSG00000164190|chr5:37048567-37048568|-/T|frameshift_variant;REV__NIPBL|p.R1636H|1|0.37|ENSG00000164190|chr5:37017149-37017149|G/A|missense_variant	77.31757898189308	0.1091473830098891	1				NaN	NaN	0	NaN	2630	3389	6019
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6022	21.709	NaN	11043	30	0	5226.7	0.038	+			43496	TGQGLTHPKDL	11	44	389.54337569273014	1165.6082976783905	3	389.5435791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TGQGLTHPKDL_	ENST00000533210.5_1_8:144650334-144650907:-|nuORF	34.08650109265054	0.6322515996262609	1				NaN	NaN	0	NaN	2631	3389	6019
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6033	21.734	NaN	4046.9	30	0	727.39	0.214	+			19921	KEFEGKTL	8	50	476.26100324573235	950.5074535582647	2	476.2605285644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEFEGKTL_	ENSG00000080824|ENST00000216281|HSP90AA1;ENST00000378770.1_1_4:190394307-190396341:+|nuORF;ENST00000530115.1_1_11:27910903-27911533:-|nuORF;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000205100|Q58FG1|HSP90AA4P	69.6276240434122	0.4100012001731381	1				NaN	NaN	0	NaN	2639	3392	6032
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6034	21.738	NaN	1262.7	30	0	153.04	0.106			+	31057	QEWLVKLE	8	48	522.7882688988618	1043.5619848645235	2	522.7891235351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QEWLVKLE_	REV__ENSG00000137877|ENST00000320955|SPTBN5;REV__SPTBN5|p.A3297Gfs*48|1|0.56|ENSG00000137877|chr15:41853672-41853673|-/C|frameshift_variant;REV__SPTBN5|p.G2751Afs*60|1|0.08|ENSG00000137877|chr15:41857685-41857685|C/-|frameshift_variant	64.20726635412375	0.4601301477144759	1				NaN	NaN	0	NaN	2640	3392	6032
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6035	21.74	NaN	901.15	30	0	177.18	0.035			+	-1	LVCPWSDF	8	41	512.2336526820985	NaN	0	512.2338256835938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LVC(Carbamidomethyl (C))PWSDF_	REV__ENSG00000124557|ENST00000684113|BTN1A1	26.79610172149135	1.7418937515398478	1				NaN	NaN	0	NaN	2641	3392	6032
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6042	21.758	NaN	6707.6	30	0	889.62	0.214	+			16202	HECASINRI	9	70	550.2694592832801	1098.52436563336	2	550.27001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_HEC(Carbamidomethyl (C))ASINRI_	ENSG00000172531|ENST00000376745|PPP1CA;ENSG00000186298|ENST00000335007|PPP1CC;ENSG00000213639|ENST00000395366|PPP1CB;ENST00000526510.5_1_11:67166008-67168740:-|nuORF;ENST00000532446.5_1_11:67166008-67168991:-|nuORF;nc|ENSG00000172531|P62136-2|PPP1CA;nc|ENSG00000172531|P62136-3|PPP1CA;nc|ENSG00000186298|P36873-2|PPP1CC;PPP1CB|p.E217Rfs*3|1|0.29|ENSG00000213639|chr2:28788708-28788709|-/G|frameshift_variant	90.60085204095205	0.06317133949006545	1				NaN	NaN	0	NaN	2645	3395	6041
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6043	21.761	NaN	1764.4	30	0	463.37	0.106			+	46890	VIPTAPSR	8	46	420.7497515881795	839.484950243159	2	420.7507629394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VIPTAPSR_	REV__ENSG00000136059|ENST00000383759|VILL;REV__ENST00000486616.5_1_3:38045275-38047830:+|nuORF;REV__nc|ENSG00000136059|O15195-2|VILL	40.5726180659479	0.6527593143185008	1				NaN	NaN	0	NaN	2646	3395	6041
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6044	21.763	NaN	1604.6	30	0	317.83	0.106				-1	LSFWVCSATPV	11	50	422.8780714349118	NaN	0	423.2579650878906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LSFWVC(Carbamidomethyl (C))SATPV_	nc|ENSG00000227152|P0C7T2|OR2T7	28.5767321226876	0.4380616241468488	1				NaN	NaN	0	NaN	2647	3395	6041
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6045	21.765	NaN	1102.5	30	0	139.42	0.106	+			3646	ASYGRDAFAK	10	46	543.2722109802731	1084.5298690273462	2	543.272705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASYGRDAFAK_	ENSG00000176658|ENST00000318217|MYO1D	63.42647028704847	0.33467688528802414	1				NaN	NaN	0	NaN	2648	3395	6041
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6046	21.767	NaN	1496.1	30	0	510.92	0.035	+			9604	ELLLFLMD	8	42	497.2716623532958	NaN	0	497.2709045410156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ELLLFLMD_	ENSG00000138592|ENST00000307179|USP8;ENST00000419830.2_1_15:50786258-50791282:+|nuORF;nc|ENSG00000138592|P40818-2|USP8;USP8|p.K997Rfs*2|1|0.11|ENSG00000138592|chr15:50497178-50497178|A/-|frameshift_variant	40.5726180659479	1.7418937515398478	1				NaN	NaN	0	NaN	2649	3395	6041
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6057	21.792	NaN	1964.9	30	0	634.37	0.214	+			37857	SNPGGRPAL	9	41	434.735192489359	867.455832045518	2	434.7356262207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SNPGGRPAL_	ENSG00000114554|ENST00000393409|PLXNA1;PLXNA1|p.Q1019Rfs*22|3|0.36|ENSG00000114554|chr3:127016548-127016548|C/-|frameshift_variant	40.77816245573522	0.41113185337114944	1				NaN	NaN	0	NaN	2657	3398	6056
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6058	21.796	NaN	635.63	30	0	226.46	0.035	+			11565	FPLVMLIW	8	34	509.79364013671875	NaN	0	509.79364013671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FPLVMLIW_	ENSG00000165092|ENST00000297785|ALDH1A1;ENST00000482210.5_1_9:75538907-75567871:-|nuORF	16.704963439144045	1.7418937515398478	1				NaN	NaN	0	NaN	2658	3398	6056
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6071	21.823	NaN	8178.7	30	0	1489.2	0.214	+			145	AAGVQIQM	8	60	409.2151544434557	816.4157559537114	2	409.2154235839844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAGVQIQM_	CD207|p.S159Vfs*9|1|0.3|ENSG00000116031|chr2:70833736-70833736|T/-|frameshift_variant;ENSG00000116031|ENST00000410009|CD207	44.53106598305862	0.628196326904373	1				NaN	NaN	0	NaN	2668	3401	6070
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6072	21.827	NaN	1723.3	30	0	170.44	0.106	+			5647	AVDDRGLYK	9	53	518.7747115401503	NaN	0	518.774658203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVDDRGLYK_	ENSG00000140612|ENST00000268220|SEC11A;nc|ENSG00000140612|P67812-2|SEC11A;nc|ENSG00000140612|P67812-3|SEC11A;nc|ENSG00000140612|P67812-4|SEC11A;nc|ENSG00000226098|P0C7V7|SEC11B	51.19269402634007	0.19847346126499396	1				NaN	NaN	0	NaN	2669	3401	6070
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6073	21.829	NaN	4777.6	30	0	1866.6	0.106			+	4694	ATLSRTVAVA	10	30	330.19743445116285	987.5704739536886	3	330.1974792480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATLSRTVAVA_	REV__ENST00000395756.5_1_17:17715938-17721122:-|nuORF	44.377184641726394	0.5088115166961078	1				NaN	NaN	0	NaN	2670	3401	6070
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6074	21.831	NaN	1749.5	30	0	292.72	0.106			+	33470	RISIVYEK	8	43	504.2979393620433	NaN	0	504.2982482910156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RISIVYEK_	REV__ENSG00000134744|ENST00000257177|TUT4;REV__nc|ENSG00000134744|Q5TAX3|TUT4	29.14955571784316	1.7418937515398478	1				NaN	NaN	0	NaN	2671	3401	6070
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6075	21.832	NaN	1885.5	30	0	801.18	0.106	+			4986	ATRSKSNLK	9	29	335.53302001953125	NaN	0	335.53302001953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATRSKSNLK_	ENSG00000066827|ENST00000377838|ZFAT;nc|ENSG00000066827|Q9P243-2|ZFAT;nc|ENSG00000066827|Q9P243-4|ZFAT	31.529811441608018	0.3183796599642538	1				NaN	NaN	0	NaN	2672	3401	6070
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6076	21.834	NaN	1543.9	30	0	722.68	0.036	+			21996	KSFGELVHK	9	36	348.86554203810516	NaN	0	348.8658752441406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KSFGELVHK_	ENSG00000071054|ENST00000324219|MAP4K4;MAP4K4|p.G1177Efs*5|1|0.19|ENSG00000071054|chr2:101888826-101888826|G/-|frameshift_variant;nc|ENSG00000071054|O95819-2|MAP4K4;nc|ENSG00000071054|O95819-3|MAP4K4;nc|ENSG00000071054|O95819-4|MAP4K4;nc|ENSG00000071054|O95819-5|MAP4K4;nc|ENSG00000071054|O95819-6|MAP4K4;nc|ENSG00000071054|O95819|MAP4K4	26.69291269510374	0.34280015626154364	1				NaN	NaN	0	NaN	2673	3401	6070
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6077	21.835	NaN	1000.6	30	0	355.31	0.14	+			37197	SKDKSSKKH	9	45	522.795529522867	NaN	0	522.795654296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SKDKSSKKH_	ENSG00000111011|ENST00000331738|RSRC2;ENST00000433877.6_1_12:122990076-123005058:-|nuORF;ENST00000527399.3_1_12:122999727-123005058:-|nuORF;nc|ENSG00000111011|Q7L4I2-2|RSRC2;RSRC2|p.R335Gfs*23|1|0.06|ENSG00000111011|chr12:122508250-122508250|T/-|frameshift_variant	51.19269402634007	0.19847346126499396	1				NaN	NaN	0	NaN	2674	3401	6070
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6089	21.862	NaN	7331.7	30	0	2862.1	0.214	+			49016	VVGPVGCGK	9	47	408.2256142239259	814.4366755146518	2	408.2257080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVGPVGCGK_	ABCC3|p.A658D|1|0.1|ENSG00000108846|chr17:50669175-50669175|C/A|missense_variant;ABCC3|p.L968Afs*31|1|0.33|ENSG00000108846|chr17:50675920-50675921|-/G|frameshift_variant;ENSG00000108846|ENST00000285238|ABCC3;ENST00000502426.5_1_17:48736553-48755440:+|nuORF;nc|ENSG00000108846|O15438-2|ABCC3;nc|ENSG00000108846|O15438-4|ABCC3	50.0245360154114	0.3026755932229825	1				NaN	NaN	0	NaN	2683	3404	6088
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6090	21.866	NaN	1967.1	30	0	228.96	0.106	+			38101	SPVNSSKQPSY	11	54	597.2931579564741	1192.5717629797482	2	597.293701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SPVNSSKQPSY_	ENSG00000159199|ENST00000393366|ATP5MC1;ENST00000502964.5_1_17:46971694-46973128:+|nuORF;ENST00000513781.5_1_17:46970480-46973128:+|nuORF	72.09557110113691	0.21826960075221502	1				NaN	NaN	0	NaN	2684	3404	6088
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6091	21.868	NaN	5637.5	30	0	2132.1	0.106				-1	RKHLPMCI	8	49	357.52559249880034	1069.554948096601	3	357.525634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_RKHLPM(Oxidation (M))C(Carbamidomethyl (C))I_	ENST00000451653.5_2_3:42589735-42590053:-|nuORF	25.450171626174864	0.7628259754767981	1				NaN	NaN	0	NaN	2685	3404	6088
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6092	21.869	NaN	892.37	30	0	278.05	0.106			+	6488	AWAASAKVDP	10	44	508.26190185546875	NaN	0	508.26190185546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AWAASAKVDP_	REV__ENSG00000169126|ENST00000305242|ODAD2;REV__nc|ENSG00000169126|Q5T2S8-2|ODAD2	37.50817390946774	0.3770175549877019	1				NaN	NaN	0	NaN	2686	3404	6088
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6093	21.871	NaN	836.97	30	0	138.04	0.033	+			11809	FSSQVSKP	8	49	440.23370361328125	NaN	0	440.23370361328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FSSQVSKP_	B4GALNT4|p.G768Afs*19|1|0.14|ENSG00000182272|chr11:379512-379512|G/-|frameshift_variant;ENSG00000182272|ENST00000329962|B4GALNT4	39.252832667884924	1.7418937515398478	1				NaN	NaN	0	NaN	2687	3404	6088
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6107	21.901	NaN	2847.1	30	0	430.4	0.214			+	49113	VVLKCIHY	8	66	487.77908009046354	973.5436072477271	2	487.7790222167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVLKCIHY_	REV__ENST00000392663.6_1_2:170350320-170356023:+|nuORF	47.91560031466742	0.6071945918984287	1				NaN	NaN	0	NaN	2698	3407	6106
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6108	21.905	NaN	2711.8	30	0	550.47	0.106	+			3924	ATASPIVAR	9	48	443.26144383223505	884.5083347312701	2	443.2614440917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATASPIVAR_	ENSG00000131725|ENST00000254029|WDR44;nc|ENSG00000131725|Q5JSH3-2|WDR44;nc|ENSG00000131725|Q5JSH3-4|WDR44;WDR44|p.N542Mfs*11|2|0.39|ENSG00000131725|chrX:118409575-118409575|A/-|frameshift_variant	74.25504064058377	0.12238981753128622	1				NaN	NaN	0	NaN	2699	3407	6106
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6109	21.907	NaN	4640.3	30	0	2624.8	0.106			+	2149	ALLGPHLERV	10	39	368.8888257060786	1103.6446477184359	3	368.8888244628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ALLGPHLERV_	REV__ENSG00000131584|ENST00000354700|ACAP3;REV__ENST00000467278.5_1_1:1228946-1234134:-|nuORF;REV__nc|ENSG00000131584|Q96P50-1|ACAP3;REV__nc|ENSG00000131584|Q96P50-4|ACAP3	24.519189625965996	0.6795976720565101	1				NaN	NaN	0	NaN	2700	3407	6106
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6110	21.908	NaN	1011.1	30	0	213.98	0.106			+	47771	VSGTVRHW	8	49	471.2506103515625	NaN	0	471.2506103515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSGTVRHW_	REV__ENSG00000127914|ENST00000356239|AKAP9;REV__ENST00000463118.1_1_7:91729006-91736737:+|nuORF;REV__ENST00000487258.5_1_7:91722364-91739470:+|nuORF;REV__nc|ENSG00000127914|Q99996-1|AKAP9;REV__nc|ENSG00000127914|Q99996-3|AKAP9;REV__nc|ENSG00000127914|Q99996-5|AKAP9;REV__nc|ENSG00000127914|Q99996-6|AKAP9	30.503639358989545	1.7418937515398478	1				NaN	NaN	0	NaN	2701	3407	6106
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6111	21.91	NaN	919.25	30	0	110.13	0.035	+			1298	AESSSKFKP	9	47	490.7562739199658	NaN	0	490.756103515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AESSSKFKP_	ENSG00000075292|ENST00000264447|ZNF638;nc|ENSG00000075292|Q14966-3|ZNF638;nc|ENSG00000075292|Q14966-5|ZNF638;ZNF638|p.E1606Lfs*12|1|0.06|ENSG00000075292|chr2:71426683-71426684|-/CCTGAGAA|frameshift_variant	40.77816245573522	0.2702456086868081	1				NaN	NaN	0	NaN	2702	3407	6106
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6123	21.936	NaN	2106.5	30	0	311.9	0.214	+			4722	ATMEVKVGR	9	53	495.77411242158007	NaN	0	495.774169921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATMEVKVGR_	ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1	70.8162118820467	0.10318768208603292	1				NaN	NaN	0	NaN	2711	3410	6122
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6124	21.939	NaN	3881.1	30	0	780.07	0.106			+	12769	GELMRALWY	9	43	380.19641101233225	1137.5674036371968	3	380.1966552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GELMRALWY_	REV__ENSG00000124535|ENST00000380773|WRNIP1;REV__nc|ENSG00000124535|Q96S55-2|WRNIP1;REV__nc|ENSG00000124535|Q96S55-3|WRNIP1;REV__nc|ENSG00000124535|Q96S55-4|WRNIP1	45.9519527083369	0.35044536499095585	1				NaN	NaN	0	NaN	2712	3410	6122
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6125	21.941	NaN	2682.3	30	0	636.33	0.106	+			2456	APLKSKMIY	9	60	533.802510600992	1065.590468268784	2	533.8033447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_APLKSKM(Oxidation (M))IY_	ENSG00000125868|ENST00000246069|DSTN;ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65623104-65623215:-|nuORF;ENST00000602547.1_1_12:6994092-6994545:+|nuORF;nc|ENSG00000125868|P60981-2|DSTN;nc|ENSG00000165410|Q9Y281-3|CFL2	64.20726635412375	0.17854274437659667	1				NaN	NaN	0	NaN	2713	3410	6122
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6126	21.943	NaN	995.29	30	0	103.9	0.106	+			24444	LGEETPRRN	9	46	536.27880859375	NaN	0	536.27880859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LGEETPRRN_	ENST00000536687.1_1_11:61129481-61129535:-|nuORF	51.33545320467046	0.19748963086191895	1				NaN	NaN	0	NaN	2714	3410	6122
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6127	21.945	NaN	2121.7	30	0	702.95	0.106	+			10477	EVQDPAPAQ	9	58	477.7287763311454	NaN	0	477.7288818359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EVQDPAPAQ_	ENSG00000055950|ENST00000318364|MRPL43;nc|ENSG00000055950|Q8N983-2|MRPL43;nc|ENSG00000055950|Q8N983-3|MRPL43;nc|ENSG00000055950|Q8N983-6|MRPL43;nc|ENSG00000055950|Q8N983-7|MRPL43;nc|ENSG00000055950|Q8N983|MRPL43	44.377184641726394	0.24544280798894275	1				NaN	NaN	0	NaN	2715	3410	6122
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6128	21.947	NaN	1003.6	30	0	253.64	0.035	+			51585	YYNGKFPK	8	42	508.76279939284404	1015.5110458524881	2	508.76275634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YYNGKFPK_	tr|U7T159|U7T159_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00702PE=4SV=1	26.79610172149135	0.7524337208463756	1				NaN	NaN	0	NaN	2716	3410	6122
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6129	21.947	NaN	1191.5	30	0	139.08	0.14	+			44240	TRTLLTPKQ	9	51	529.3214040935324	1056.6282552538646	2	529.8236694335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TRTLLTPKQ_	ENST00000395135.7_1_15:74335345-74335513:+|nuORF	38.753607047826485	0.4348790777924195	1				NaN	NaN	0	NaN	2717	3410	6122
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6141	21.975	NaN	4207.7	30	0	813.36	0.214			+	32118	QSKLPIQS	8	62	450.76105104164	899.50754915008	2	450.7612609863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QSKLPIQS_	REV__ENSG00000166833|ENST00000349880|NAV2;REV__NAV2|p.K558Sfs*35|1|0.41|ENSG00000166833|chr11:19933843-19933843|A/-|frameshift_variant;REV__NAV2|p.V2057Wfs*16|1|0.23|ENSG00000166833|chr11:20095744-20095744|G/-|frameshift_variant;REV__nc|ENSG00000166833|Q8IVL1-2|NAV2;REV__nc|ENSG00000166833|Q8IVL1|NAV2	93.1432384553994	0.2679547234115296	1				NaN	NaN	0	NaN	2726	3413	6140
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6142	21.978	NaN	1974	30	0	212	0.106	+			32820	RAYPHVFTK	9	66	559.8101692720804	1117.6057856109608	2	559.8102416992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RAYPHVFTK_	ENSG00000164405|ENST00000378670|UQCRQ;ENST00000498309.1_1_5:132202377-132202798:+|nuORF;UQCRQ|p.G34A|1|0.04|ENSG00000164405|chr5:132866982-132866982|G/C|missense_variant	85.16082228582465	0.07850854922700509	1				NaN	NaN	0	NaN	2727	3413	6140
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6143	21.98	NaN	931.1	30	0	151.3	0.106			+	12170	GALLMGLLPPL	11	43	547.8346557617188	NaN	0	547.8346557617188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GALLMGLLPPL_	REV__ENSG00000164037|ENST00000296422|SLC9B1;REV__nc|ENSG00000164037|Q4ZJI4-3|SLC9B1	17.364965105453717	0.456735970842152	1				NaN	NaN	0	NaN	2728	3413	6140
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6144	21.982	NaN	946.88	30	0	125.92	0.106	+			41712	SVSDPVEDK	9	43	488.23519180946965	NaN	0	488.2356872558594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVSDPVEDK_	ENSG00000038219|ENST00000040738|BOD1L1	31.529811441608018	0.3183796599642538	1				NaN	NaN	0	NaN	2729	3413	6140
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6145	21.984	NaN	1712.8	30	0	570.51	0.039			+	-1	AVKPMKLSPMQ	11	42	415.89434814453125	NaN	0	415.89434814453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_AVKPM(Oxidation (M))KLSPMQ_	REV__AHNAK2|p.D4448Gfs*6|1|0.2|ENSG00000185567|chr14:104942108-104942109|-/C|frameshift_variant;REV__AHNAK2|p.E5149Gfs*8|1|0.32|ENSG00000185567|chr14:104940005-104940006|-/C|frameshift_variant;REV__AHNAK2|p.E5446Gfs*7|1|0.32|ENSG00000185567|chr14:104939114-104939115|-/C|frameshift_variant;REV__AHNAK2|p.L4206Cfs*19|1|0.12|ENSG00000185567|chr14:104942835-104942835|G/-|frameshift_variant;REV__AHNAK2|p.P2536Lfs*14|1|0.11|ENSG00000185567|chr14:104947844-104947844|G/-|frameshift_variant;REV__ENSG00000185567|ENST00000333244|AHNAK2;REV__nc|ENSG00000185567|Q8IVF2-3|AHNAK2	37.50817390946774	0.39825797133360086	1				NaN	NaN	0	NaN	2730	3413	6140
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6155	22.006	NaN	14617	30	0	1426.8	0.214	+			40363	STTTGHLIYK	10	87	560.8031920770497	1119.5918312208994	2	560.8046264648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STTTGHLIYK_	EEF1A1|p.P263Lfs*27|1|0.36|ENSG00000156508|chr6:73518595-73518595|G/-|frameshift_variant;EEF1A2|p.T239Hfs*50|1|0.26|ENSG00000101210|chr20:63493194-63493195|-/G|frameshift_variant;EEF1A2|p.T239Rfs*40|1|0.31|ENSG00000101210|chr20:63493195-63493195|G/-|frameshift_variant;ENSG00000101210|ENST00000217182|EEF1A2;ENSG00000156508|ENST00000309268|EEF1A1;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	63.53385203322761	0.33370026130094593	1				NaN	NaN	0	NaN	2737	3416	6154
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6156	22.009	NaN	16289	30	0	7129.5	0.106	+			19271	KAFNQGKIFK	10	76	394.2328361003139	1179.6766789011417	3	394.2332763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KAFNQGKIFK_	ENSG00000254772|ENST00000329251|EEF1G;ENST00000526409.5_1_11:62327153-62342310:-|nuORF;nc|ENSG00000254772|P26641-2|EEF1G;NCEH1-EEF1G|1|fusion	84.9155231211612	0.16018353804806162	1				NaN	NaN	0	NaN	2738	3416	6154
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6157	22.011	NaN	3943.5	30	0	340.08	0.106	+			42185	TAAAAVRQM	9	61	459.7448851238263	917.4752173144526	2	459.74517822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TAAAAVRQM_	ENSG00000130985|ENST00000335972|UBA1;nc|ENSG00000130985|P22314-2|UBA1	131.03138772384656	0.014687601201650916	1				NaN	NaN	0	NaN	2739	3416	6154
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6158	22.013	NaN	2322.6	30	0	774.36	0.106	+			30572	QANDDARTF	9	49	519.2355297401875	1036.456506547175	2	519.2369384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QANDDARTF_	ENSG00000181029|ENST00000596148|TRAPPC5	58.22992032128504	0.22837015374068087	1				NaN	NaN	0	NaN	2740	3416	6154
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6159	22.015	NaN	1139.4	30	0	205.7	0.106	+			24284	LEYAAVSFV	9	51	499.7615305093873	NaN	0	499.7615661621094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LEYAAVSFV_	GLRA1|p.N333S|1|0.33|ENSG00000145888|chr5:151828982-151828982|T/C|missense_variant	51.33545320467046	0.19748963086191895	1				NaN	NaN	0	NaN	2741	3416	6154
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6160	22.017	NaN	1508.9	30	0	162.04	0.034	+			12596	GEHLKTDL	8	45	456.7432968500205	911.472040766841	2	456.7434997558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GEHLKTDL_	ENSG00000100345|ENST00000216181|MYH9;MYH9|p.I784*|1|0.07|ENSG00000100345|chr22:36304036-36304036|G/-|frameshift_variant;nc|ENSG00000100345|P35579-2|MYH9	37.81151784470057	0.6698925118251505	1				NaN	NaN	0	NaN	2742	3416	6154
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6161	22.017	NaN	3254.9	30	0	1109.8	0.139	+			39575	STGNMVISK	9	58	468.74410930503194	935.4736656768639	2	468.7447509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STGNMVISK_	ENSG00000102837|ENST00000219022|OLFM4	45.02220120713402	0.3613509778819777	1				NaN	NaN	0	NaN	2743	3416	6154
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6172	22.044	NaN	16234	30	0	5797	0.214			+	40342	STTHKYSAII	10	47	374.20430545254345	1119.5910869578304	3	374.2046203613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STTHKYSAII_	REV__ENSG00000198492|ENST00000373812|YTHDF2;REV__ENST00000604759.1_1_14:39684672-39685536:+|nuORF;REV__nc|ENSG00000198492|Q9Y5A9-2|YTHDF2	24.20275056022122	0.6821818413321409	1				NaN	NaN	0	NaN	2751	3419	6171
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6173	22.048	NaN	2178.2	30	0	476.16	0.106	+			17041	HPYQPDPKM	9	44	556.7632127424614	1111.5118725517227	2	556.7634887695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HPYQPDPKM_	CBX4|p.E288Rfs*117|1|0.35|ENSG00000141582|chr17:79834780-79834780|C/-|frameshift_variant;CBX4|p.N231Tfs*3|2|0.38|ENSG00000141582|chr17:79834952-79834952|G/-|frameshift_variant;ENSG00000141582|ENST00000269397|CBX4	60.97194046774394	0.20551255781574032	1				NaN	NaN	0	NaN	2752	3419	6171
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6174	22.05	NaN	1436.1	30	0	351.91	0.106	+			6361	AVTTVVNPK	9	44	464.7760541196841	927.5375553061682	2	464.7763366699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVTTVVNPK_	ENSG00000150093|ENST00000302278|ITGB1	82.24051045832904	0.08786059719216216	1				NaN	NaN	0	NaN	2753	3419	6171
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6175	22.052	NaN	884.83	30	0	295.55	0.106	+			23915	LDLLKEER	8	36	508.2930517600702	NaN	0	508.2689514160156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LDLLKEER_	tr|U7SSR6|U7SSR6_FUSNUDNAprotectingproteinDprAOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01464PE=3SV=1	23.04248740728303	1.7418937515398478	1				NaN	NaN	0	NaN	2754	3419	6171
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6176	22.053	NaN	1060.6	30	0	145.51	0.106	+			12419	GEAPGRASL	9	47	429.2271184999828	NaN	0	429.2269287109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GEAPGRASL_	ENST00000577380.5_1_17:73467910-73481983:+|nuORF;ENST00000585277.1_1_17:73467910-73481792:+|nuORF	35.15202426646627	0.3000918603816441	1				NaN	NaN	0	NaN	2755	3419	6171
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6177	22.055	NaN	912.14	30	0	94.797	0.035	+			26464	LTITFSVPN	9	38	496.27497711367823	NaN	0	496.2743835449219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LTITFSVPN_	ENSG00000115919|ENST00000264170|KYNU	35.61828744233558	0.29773779453147337	1				NaN	NaN	0	NaN	2756	3419	6171
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6178	22.056	NaN	1017	30	0	114.13	0.139			+	-1	CGAARRWA	8	46	474.2367248535156	NaN	0	474.2367248535156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_C(Carbamidomethyl (C))GAARRWA_	REV__ENST00000456948.5_1_7:26241779-26241902:+|nuORF	28.2542754592877	1.7418937515398478	1				NaN	NaN	0	NaN	2757	3419	6171
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6190	22.083	NaN	6050.4	30	0	2062.7	0.214	+			36457	SEVLQTLQ	8	61	459.2499937835197	916.4854346338394	2	459.2500305175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEVLQTLQ_	ENSG00000166037|ENST00000325542|CEP57;ENST00000539855.5_1_11:95532492-95564417:+|nuORF;nc|ENSG00000166037|Q86XR8-2|CEP57;nc|ENSG00000166037|Q86XR8-4|CEP57;nc|ENSG00000166037|Q86XR8-5|CEP57	63.30626980617807	0.4690498839812213	1				NaN	NaN	0	NaN	2766	3422	6189
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6191	22.087	NaN	2580.8	30	0	340.64	0.106			+	8533	EAVEIRIE	8	54	479.7637681044358	957.5129832756717	2	479.7636413574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EAVEIRIE_	REV__ENSG00000163935|ENST00000394752|SFMBT1	66.42927471994793	0.4381325844043345	1				NaN	NaN	0	NaN	2767	3422	6189
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6192	22.089	NaN	1544	30	0	244.68	0.106	+			26674	LVGLHNIGQ	9	51	475.7739383468846	949.5333237605693	2	475.7741394042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LVGLHNIGQ_	ENSG00000184979|ENST00000215794|USP18;nc|ENSG00000184979|Q9UMW8-2|USP18	37.15910966729921	0.4535818937225704	1				NaN	NaN	0	NaN	2768	3422	6189
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6193	22.09	NaN	1553.7	30	0	311.3	0.106			+	24664	LGVGVGPQK	9	40	427.7584666242866	853.5023803153732	2	427.7581481933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LGVGVGPQK_	REV__ENSG00000186472|ENST00000333891|PCLO;REV__PCLO|p.T5069Qfs*20|1|0.11|ENSG00000186472|chr7:82760722-82760722|T/-|frameshift_variant	33.51558372728122	0.4900267029546261	1				NaN	NaN	0	NaN	2769	3422	6189
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6194	22.092	NaN	1470.9	30	0	127.15	0.036			+	-1	MEGPKGKLIL	10	43	551.3218016548193	1100.6290503764385	2	551.3231201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_M(Oxidation (M))EGPKGKLIL_	REV__ENSG00000117501|ENST00000367759|MROH9;REV__MROH9|p.L759*|1|0.19|ENSG00000117501|chr1:171025412-171025412|T/-|frameshift_variant;REV__MROH9|p.L824Cfs*10|1|0.03|ENSG00000117501|chr1:171064224-171064224|T/-|frameshift_variant;REV__nc|ENSG00000117501|Q5TGP6|MROH9	21.9598887501803	0.7004979571547932	1				NaN	NaN	0	NaN	2770	3422	6189
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6205	22.117	NaN	1875.2	30	0	362.35	0.214			+	34127	RSSVHRGP	8	53	448.2475858231358	894.4806187130716	2	448.2474365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RSSVHRGP_	REV__nc|ENSG00000118855|Q9H3U5-5|MFSD1;REV__nc|ENSG00000118855|Q9H3U5-6|MFSD1	42.396135135203025	0.6414440140393314	1				NaN	NaN	0	NaN	2778	3425	6204
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6206	22.121	NaN	4670.3	30	0	1754.5	0.106	+			39166	SSWSDPTRVE	10	54	388.5158589847524	1162.5257475544572	3	388.5164489746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSWSDPTRVE_	ENSG00000117400|ENST00000372470|MPL;nc|ENSG00000117400|P40238-2|MPL	26.69291269510374	0.6618461711292317	1				NaN	NaN	0	NaN	2779	3425	6204
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6207	22.123	NaN	2435.9	30	0	650.71	0.035	+			431	AAVAGARDTY	10	55	497.7512724584514	993.4879919837028	2	497.7519226074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AAVAGARDTY_	ENSG00000119787|ENST00000378954|ATL2;ENST00000477642.5_1_2:38525261-38527422:-|nuORF;nc|ENSG00000119787|Q8NHH9-2|ATL2;nc|ENSG00000119787|Q8NHH9-3|ATL2;nc|ENSG00000119787|Q8NHH9-4|ATL2;nc|ENSG00000119787|Q8NHH9-5|ATL2	68.78682469695295	0.28723163847957256	1				NaN	NaN	0	NaN	2780	3425	6204
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6218	22.148	NaN	2989.7	30	0	213.68	0.214	+			43589	TIIDKSKAV	9	60	487.79826471180246	973.5819764904049	2	487.7981262207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TIIDKSKAV_	ENSG00000134240|ENST00000369406|HMGCS2;HMGCS2|p.I277Sfs*22|1|0.26|ENSG00000134240|chr1:119759139-119759139|T/-|frameshift_variant;nc|ENSG00000134240|P54868-2|HMGCS2;nc|ENSG00000134240|P54868-3|HMGCS2	98.58198989935565	0.04066992115528678	1				NaN	NaN	0	NaN	2788	3428	6217
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6219	22.152	NaN	6121.1	30	0	1141.9	0.106	+			5005	ATSAPLVSR	9	69	451.2570795767215	900.499606220243	2	451.2575988769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATSAPLVSR_	CELSR1|p.G1602Vfs*104|1|0.17|ENSG00000075275|chr22:46410526-46410526|C/-|frameshift_variant;CELSR1|p.I2650Sfs*5|1|0.42|ENSG00000075275|chr22:46369187-46369187|T/-|frameshift_variant;CELSR1|p.R2275Qfs*18|1|0.18|ENSG00000075275|chr22:46384603-46384604|-/G|frameshift_variant;CELSR1|p.T1849Rfs*8|2|0.25|ENSG00000075275|chr22:46397831-46397831|C/-|frameshift_variant;CELSR2-KIAA1324|1|fusion;CELSR2|p.G1044Vfs*17|1|0.42|ENSG00000143126|chr1:109253206-109253206|G/-|frameshift_variant;CELSR2|p.P2879Lfs*14|1|0.28|ENSG00000143126|chr1:109273557-109273557|C/-|frameshift_variant;CELSR2|p.V2215Wfs*26|2|0.42|ENSG00000143126|chr1:109269115-109269115|C/-|frameshift_variant;CELSR3|p.A2340Pfs*45|1|0.25|ENSG00000008300|chr3:48647952-48647952|C/-|frameshift_variant;CELSR3|p.R2529Pfs*2|1|0.34|ENSG00000008300|chr3:48645746-48645747|-/G|frameshift_variant;CELSR3|p.S1935Afs*4|1|0.38|ENSG00000008300|chr3:48651998-48651998|G/-|frameshift_variant;ENSG00000008300|ENST00000164024|CELSR3;ENSG00000075275|ENST00000674500|CELSR1;ENSG00000143126|ENST00000271332|CELSR2;ENST00000497509.1_1_22:46926386-46930076:-|nuORF;nc|ENSG00000008300|Q9NYQ7-2|CELSR3;nc|ENSG00000075275|Q9NYQ6-2|CELSR1;nc|ENSG00000075275|Q9NYQ6|CELSR1	59.93077597824379	0.21419174904018318	1				NaN	NaN	0	NaN	2789	3428	6217
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6220	22.154	NaN	678.24	30	0	145.36	0.106	+			10232	ETIEDLPG	8	37	437.2145521921843	NaN	0	437.2145080566406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ETIEDLPG_	ENSG00000125257|ENST00000645237|ABCC4;nc|ENSG00000125257|O15439-2|ABCC4	26.79610172149135	1.7418937515398478	1				NaN	NaN	0	NaN	2790	3428	6217
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6221	22.155	NaN	1582.6	30	0	618.42	0.106	+			33197	REYQELLNTK	10	42	431.8963928222656	NaN	0	431.8963928222656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_REYQELLNTK_	CON__Q9DCV7	27.047317107675042	0.41136583337917604	1				NaN	NaN	0	NaN	2791	3428	6217
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6222	22.157	NaN	3089.1	30	0	758.83	0.106	+			46674	VGGPRLSARPA	11	40	360.8796321893542	NaN	0	360.8797912597656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VGGPRLSARPA_	ENST00000586128.5_1_17:75446713-75478229:+|nuORF	32.75053402867276	0.4194607570143992	1				NaN	NaN	0	NaN	2792	3428	6217
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6223	22.159	NaN	3719.2	30	0	441.66	0.106			+	21872	KRMEELKK	8	61	531.3108977979191	1060.607242662638	2	531.8119506835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KRMEELKK_	REV__ENSG00000151838|ENST00000537690|CCDC175	74.25504064058377	0.37144338840759816	1				NaN	NaN	0	NaN	2793	3428	6217
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6224	22.161	NaN	861.72	30	0	76.603	0.034			+	-1	LADASLGMR	9	36	475.2418787513707	948.4692045695414	2	476.25054931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_LADASLGM(Oxidation (M))R_	REV__ENSG00000059378|ENST00000263549|PARP12;REV__PARP12|p.K455Rfs*14|1|0.3|ENSG00000059378|chr7:140034292-140034292|T/-|frameshift_variant	24.20275056022122	0.577060078256802	1				NaN	NaN	0	NaN	2794	3428	6217
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6232	22.181	NaN	2255.5	30	0	488.41	0.214	+			38790	SSMSTALSK	9	50	456.2289383192674	910.4433237053348	2	456.22894287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSMSTALSK_	nc|ENSG00000138119|Q9NZM1-3|MYOF	51.19269402634007	0.2889735674168909	1				NaN	NaN	0	NaN	2799	3431	6231
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6233	22.184	NaN	3361.5	30	0	888.16	0.106				-1	DMWASTFTL	9	44	363.1651869256224	1086.4737313770672	3	363.1654052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_DM(Oxidation (M))WASTFTL_	ENSG00000188011|ENST00000343216|RTP5	34.172542307311794	0.4838870758800184	1				NaN	NaN	0	NaN	2800	3431	6231
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6234	22.186	NaN	1208.3	30	0	367.74	0.035	+			31475	QKYSLQLK	8	41	504.2979393620433	NaN	0	504.2978210449219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QKYSLQLK_	AGO4|p.E724Kfs*16|1|0.24|ENSG00000134698|chr1:35841744-35841745|AG/-|frameshift_variant;ENSG00000134698|ENST00000373210|AGO4	56.72105179125745	1.7418937515398478	1				NaN	NaN	0	NaN	2801	3431	6231
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6241	22.204	NaN	4745.6	30	0	1965.6	0.214			+	48479	VTLVHEAR	8	42	462.76689868127585	923.5192444293517	2	462.76678466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTLVHEAR_	REV__DCHS1|p.G2765Rfs*10|1|0.26|ENSG00000166341|chr11:6623383-6623384|-/T|frameshift_variant;REV__DCHS1|p.H2834Sfs*7|1|0.44|ENSG00000166341|chr11:6623177-6623178|-/C|frameshift_variant;REV__ENSG00000166341|ENST00000299441|DCHS1	63.30626980617807	0.4690498839812213	1				NaN	NaN	0	NaN	2805	3434	6240
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6242	22.208	NaN	2570.1	30	0	849.51	0.106			+	9630	ELQQGSQAL	9	47	487.25095540629496	972.48735787939	2	487.25103759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ELQQGSQAL_	REV__ENSG00000025708|ENST00000252029|TYMP;REV__ENST00000476284.1_1_22:50964673-50968379:-|nuORF;REV__ENST00000487162.1_1_22:50967153-50967951:-|nuORF;REV__nc|ENSG00000025708|P19971-2|TYMP;REV__TYMP|p.L223Pfs*54|1|0.03|ENSG00000025708|chr22:50527262-50527263|-/GTTTCTTACTGAGAATGCCTCCATTCTCAGCCCCTCCACGG|frameshift_variant	77.31757898189308	0.1091473830098891	1				NaN	NaN	0	NaN	2806	3434	6240
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6243	22.209	NaN	2178	30	0	731.89	0.04			+	9771	ENNGFDRFIDL	11	41	447.21437292590326	1338.6212893779098	3	447.2143859863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ENNGFDRFIDL_	REV__ENST00000244070.7_1_20:56821016-56884481:-|nuORF;REV__ENST00000493688.5_1_20:56826891-56884481:-|nuORF;REV__nc|ENSG00000124224|Q9P1A2|PPP4R1L	16.52985593315525	0.793090074565524	1				NaN	NaN	0	NaN	2807	3434	6240
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6254	22.235	NaN	14889	30	0	3395.8	0.214	+			38178	SQCGSLIGK	9	71	475.2418787513707	948.4692045695414	2	475.2424621582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SQC(Carbamidomethyl (C))GSLIGK_	ENSG00000090097|ENST00000461554|PCBP4;ENSG00000183570|ENST00000681687|PCBP3;ENSG00000197111|ENST00000546463|PCBP2;ENST00000468429.5_1_21:47321003-47359956:+|nuORF;ENST00000492809.5_1_3:51992079-51994784:-|nuORF;ENST00000497390.5_1_3:51992079-51994784:-|nuORF;ENST00000547717.1_1_12:53848575-53861193:+|nuORF;ENST00000548190.1_1_12:53849722-53854210:+|nuORF;nc|ENSG00000090097|P57723-2|PCBP4;nc|ENSG00000183570|P57721-2|PCBP3;nc|ENSG00000183570|P57721-3|PCBP3;nc|ENSG00000183570|P57721-4|PCBP3;nc|ENSG00000183570|P57721-5|PCBP3;nc|ENSG00000197111|Q15366-2|PCBP2;nc|ENSG00000197111|Q15366-4|PCBP2;nc|ENSG00000197111|Q15366-5|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;nc|ENSG00000197111|Q15366-7|PCBP2;nc|ENSG00000197111|Q15366-8|PCBP2;nc|ENSG00000197111|Q15366|PCBP2;PCBP2|p.T202Kfs*26|1|0.32|ENSG00000197111|chr12:53464773-53464773|C/-|frameshift_variant;PCBP4|p.G203Efs*11|1|0.1|ENSG00000090097|chr3:51959397-51959398|-/CTCT|frameshift_variant	79.48907831485694	0.09975780661107167	1				NaN	NaN	0	NaN	2815	3437	6253
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6255	22.238	NaN	2373.7	30	0	426.33	0.106	+			48055	VSSKIELN	8	54	445.25292739411833	888.4913018550367	2	445.253173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSSKIELN_	ENSG00000113522|ENST00000378823|RAD50;nc|ENSG00000113522|Q92878-2|RAD50;nc|ENSG00000113522|Q92878-3|RAD50;RAD50|p.N934Ifs*6|1|0.26|ENSG00000113522|chr5:132608690-132608690|A/-|frameshift_variant	40.77816245573522	0.6514838689002179	1				NaN	NaN	0	NaN	2816	3437	6253
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6256	22.24	NaN	1979.6	30	0	380.58	0.106	+			35315	SAMSNPRAM	9	48	482.72024884274975	963.4259447522995	2	482.7211608886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAMSNPRAM_	ENSG00000135018|ENST00000376395|UBQLN1;ENSG00000188021|ENST00000338222|UBQLN2;nc|ENSG00000135018|Q9UMX0-2|UBQLN1;nc|ENSG00000135018|Q9UMX0-3|UBQLN1;UBQLN2|p.P525Lfs*71|10|0.37|ENSG00000188021|chrX:56565441-56565441|C/-|frameshift_variant	41.42661286455405	0.403525789677298	1				NaN	NaN	0	NaN	2817	3437	6253
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6257	22.242	NaN	1455.4	30	0	220.32	0.106			+	9275	EHHQSGETAP	10	46	546.7403255501102	NaN	0	546.7407836914062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EHHQSGETAP_	REV__ENST00000231061.8_1_5:151054218-151066527:-|nuORF	21.68575002086885	0.4201028297492154	1				NaN	NaN	0	NaN	2818	3437	6253
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6258	22.244	NaN	2068	30	0	554.16	0.106	+			17909	IGGSIKTVPK	10	35	333.8781818992216	NaN	0	333.8784484863281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IGGSIKTVPK_	ENSG00000088812|ENST00000262919|ATRN	44.377184641726394	0.34115073642966565	1				NaN	NaN	0	NaN	2819	3437	6253
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6259	22.246	NaN	1238.8	30	0	127.3	0.039	+			36671	SGMQNMSIHTK	11	41	411.86209316210636	NaN	0	411.8624572753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SGMQNMSIHTK_	CON__H-INV:HIT000292931;CON__P05787;CON__REFSEQ:XP_092267;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	35.495647763667336	0.40722694788826996	1				NaN	NaN	0	NaN	2820	3437	6253
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6268	22.266	NaN	1556.3	30	0	175.73	0.214	+			46423	VERGPDEAM	9	51	502.22917436069844	1002.4437957881969	2	502.2295837402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VERGPDEAM_	ENSG00000024422|ENST00000263277|EHD2;ENST00000540884.1_1_19:48232905-48244686:+|nuORF;nc|ENSG00000024422|Q9NZN4-2|EHD2	42.86426827375447	0.38666266728046506	1				NaN	NaN	0	NaN	2826	3440	6267
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6269	22.269	NaN	1427.1	30	0	283.86	0.106	+			42803	TEAPLNPKA	9	43	470.7582671246329	939.5019813160658	2	470.7581787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEAPLNPKA_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000446382.2_1_9:6834760-6835018:+|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000502306.1_1_5:15450853-15451165:+|nuORF;ENST00000567299.1_1_19:9629420-9629708:+|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;nc|ENSG00000204434|Q9BYX7|POTEKP	49.44154591367651	0.3095138337212152	1				NaN	NaN	0	NaN	2827	3440	6267
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6270	22.271	NaN	1115.4	30	0	276.06	0.106	+			8651	EDLRSHAW	8	43	507.24273659657285	1012.4709202599457	2	507.2427978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EDLRSHAW_	ENSG00000137936|ENST00000260502|BCAR3;nc|ENSG00000137936|O75815-3|BCAR3	31.529811441608018	0.715883593221515	1				NaN	NaN	0	NaN	2828	3440	6267
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6271	22.273	NaN	2602.9	30	0	553.18	0.106			+	3458	ASRPPARFKTG	11	36	396.5589294433594	NaN	0	396.5589294433594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASRPPARFKTG_	REV__ENSG00000184659|ENST00000377413|FOXD4L4;REV__ENSG00000187559|ENST00000342833|FOXD4L3;REV__ENSG00000204779|ENST00000377420|FOXD4L5;REV__ENSG00000273514|ENST00000622588|FOXD4L6	28.5767321226876	0.4380616241468488	1				NaN	NaN	0	NaN	2829	3440	6267
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6272	22.275	NaN	1660.8	30	0	115.99	0.036	+			50849	YEVGQRHGL	9	57	529.7734196183806	NaN	0	529.7735595703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YEVGQRHGL_	ENSG00000204394|ENST00000375663|VARS1;ENST00000461328.1_1_6:31750434-31752201:-|nuORF;VARS|p.A620Pfs*25|1|0.23|ENSG00000204394|chr6:31782750-31782750|C/-|frameshift_variant;VARS|p.L801Wfs*10|1|0.3|ENSG00000204394|chr6:31781707-31781707|A/-|frameshift_variant	51.33545320467046	0.19748963086191895	1				NaN	NaN	0	NaN	2830	3440	6267
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6283	22.3	NaN	5561.1	30	0	1228.4	0.214	+			40995	SVGQTVITK	9	63	466.77404771322495	931.5335424932499	2	466.7740478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVGQTVITK_	ENSG00000107077|ENST00000381309|KDM4C;nc|ENSG00000293552|Q9H3R0-2|KDM4C	72.2432373244024	0.13108886737667413	1				NaN	NaN	0	NaN	2838	3443	6282
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6284	22.304	NaN	4243.7	30	0	699.32	0.106	+			273	AANVGRVV	8	47	393.2348175471674	784.4550821611348	2	393.2351379394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AANVGRVV_	ENSG00000162981|ENST00000295092|LRATD1	60.29395666154354	0.49887135096048313	1				NaN	NaN	0	NaN	2839	3443	6282
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6285	22.306	NaN	4354.5	30	0	1272.8	0.106				-1	RIRDTCGGR	9	46	364.18897038945994	1089.5450817685798	3	364.1892395019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_RIRDTC(Carbamidomethyl (C))GGR_	nc|ENSG00000070495|Q6NYC1-2|JMJD6;nc|ENSG00000070495|Q6NYC1-3|JMJD6	26.69291269510374	0.5537881896960711	1				NaN	NaN	0	NaN	2840	3443	6282
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6286	22.308	NaN	1947.3	30	0	210.1	0.106	+			35868	SEDPSHPSM	9	63	493.69770499532166	985.3808570574433	2	493.6980895996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SEDPSHPSM_	ENSG00000111642|ENST00000544040|CHD4;nc|ENSG00000111642|Q14839-2|CHD4	45.9519527083369	0.35044536499095585	1				NaN	NaN	0	NaN	2841	3443	6282
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6287	22.309	NaN	1082	30	0	138.32	0.106	+			19	AAAGGAFRP	9	40	409.21794066163204	816.4213283900641	2	409.2184753417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AAAGGAFRP_	ENSG00000106004|ENST00000222726|HOXA5;ENST00000520854.1_1_7:27181456-27182390:-|nuORF	76.84663266511073	0.11118375776443899	1				NaN	NaN	0	NaN	2842	3443	6282
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6288	22.311	NaN	973.95	30	0	104.2	0.038	+			33404	RIFAPNHVVAK	11	35	626.368601465093	1250.7226499969859	2	626.3698120117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RIFAPNHVVAK_	ENSG00000105640|ENST00000222247|RPL18A;ENST00000600238.1_1_19:17972170-17973061:+|nuORF;ENST00000602216.1_1_19:17970765-17972392:+|nuORF	53.59686742100583	0.38061189074210516	1				NaN	NaN	0	NaN	2843	3443	6282
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6289	22.312	NaN	1571.4	30	0	275.77	0.141			+	24652	LGTPHGSAM	9	42	435.7100477565054	869.4055425798108	2	436.2123107910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LGTPHGSAM_	REV__tr|U7STK0|U7STK0_FUSNUUrocanatehydrataseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=hutUPE=3SV=1	25.450171626174864	0.5654022654467333	1				NaN	NaN	0	NaN	2844	3443	6282
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6301	22.339	NaN	14512	30	0	4727.3	0.214	+			32338	QTVQGTFSK	9	62	498.26130433851694	994.5080557438339	2	498.26116943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QTVQGTFSK_	ENSG00000188112|ENST00000341865|C6orf132;nc|nan|Q5T0Z8-2|C6orf132;nc|nan|Q5T0Z8-4|C6orf132	91.26522074875469	0.06129826844580791	1				NaN	NaN	0	NaN	2853	3446	6300
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6302	22.343	NaN	2566.9	30	0	344.54	0.106	+			21265	KLNEVIVNK	9	65	528.8246005355676	NaN	0	528.8244018554688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KLNEVIVNK_	ENSG00000140199|ENST00000354181|SLC12A6;nc|ENSG00000140199|Q9UHW9-2|SLC12A6;nc|ENSG00000140199|Q9UHW9-3|SLC12A6;nc|ENSG00000140199|Q9UHW9-4|SLC12A6;nc|ENSG00000140199|Q9UHW9-5|SLC12A6;nc|ENSG00000140199|Q9UHW9-6|SLC12A6	126.24258497203832	0.0011674249988053026	1				NaN	NaN	0	NaN	2854	3446	6300
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6303	22.345	NaN	10614	30	0	922.48	0.106	+			23631	LAQKNREEL	9	72	550.8062482896647	1099.5979436461294	2	550.8069458007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LAQKNREEL_	CON__P05784;ENST00000515347.2_1_5:79584647-79585058:+|nuORF	64.20726635412375	0.17854274437659667	1				NaN	NaN	0	NaN	2855	3446	6300
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6304	22.346	NaN	6372.4	30	0	2349.7	0.106	+			45066	TVHNIIVGK	9	60	490.7978453747399	979.5811378162798	2	490.7977600097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TVHNIIVGK_	ENSG00000110048|ENST00000263847|OSBP;ENSG00000184792|ENST00000332585|OSBP2;nc|ENSG00000184792|Q969R2-2|OSBP2;nc|ENSG00000184792|Q969R2-3|OSBP2;nc|ENSG00000184792|Q969R2-4|OSBP2;nc|ENSG00000184792|Q969R2-5|OSBP2;nc|ENSG00000184792|Q969R2-6|OSBP2	93.1432384553994	0.056003526918089595	1				NaN	NaN	0	NaN	2856	3446	6300
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6305	22.348	NaN	2829.2	30	0	409.97	0.106	+			7997	DTGPGGAQSPV	11	67	493.2326653331932	984.4507777331864	2	493.2329406738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DTGPGGAQSPV_	ENSG00000008735|ENST00000329492|MAPK8IP2;nc|ENSG00000008735|Q13387-2|MAPK8IP2	60.11826168202944	0.32239947305776	1				NaN	NaN	0	NaN	2857	3446	6300
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6306	22.35	NaN	3794.4	30	0	597.14	0.039			+	17049	HQKIKEELGVA	11	56	417.90657536030324	1250.6978966811098	3	417.915283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HQKIKEELGVA_	REV__ENSG00000091164|ENST00000217515|TXNL1;REV__ENST00000587807.5_1_18:54270260-54293401:-|nuORF;REV__TXNL1|p.C161Lfs*20|1|0.21|ENSG00000091164|chr18:56618014-56618014|C/-|frameshift_variant	23.52269567125451	0.7430573033454468	1				NaN	NaN	0	NaN	2858	3446	6300
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6307	22.351	NaN	1057.5	30	0	302.84	0.141	+			3348	ASNCFAIRH	9	37	359.1746042547578	1074.5019833644735	3	359.1747131347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_ASNC(Carbamidomethyl (C))FAIRH_	ARHGEF7-ITM2B|1|fusion;ARHGEF7-ITM2B|2|fusion;ARHGEF7-ITM2B|3|fusion;ARHGEF7-ITM2B|4|fusion;ENSG00000136156|ENST00000647800|ITM2B;ITM2B|p.R243C|1|0.39|ENSG00000136156|chr13:48261150-48261150|C/T|missense_variant;nc|ENSG00000136156|Q9Y287-2|ITM2B	62.107414245175825	0.1960472003779324	1				NaN	NaN	0	NaN	2859	3446	6300
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6318	22.378	NaN	9033.8	30	0	3060.6	0.214	+			5021	ATSDMDIGK	9	63	469.21790390477474	936.4212548763495	2	469.2180480957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSDMDIGK_	ENSG00000102158|ENST00000618282|MAGT1	109.47833844074708	0.029530294723441826	1				NaN	NaN	0	NaN	2867	3449	6317
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6319	22.381	NaN	9693.4	30	0	3156.5	0.106	+			30148	PSCCTPVHR	9	59	500.22878111907056	998.4430093049411	2	500.2289733886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PSCCTPVHR_	ENST00000536221.1_8:145484984-145485693:+|nuORF	34.172542307311794	0.4838870758800184	1				NaN	NaN	0	NaN	2868	3449	6317
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6320	22.383	NaN	2186.9	30	0	272.59	0.106			+	21741	KQMKCNKK	8	66	532.787482107904	NaN	0	532.7874145507812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_KQMKC(Carbamidomethyl (C))NKK_	REV__CNTLN|p.I1388Nfs*3|1|0.3|ENSG00000044459|chr9:17502587-17502588|-/A|frameshift_variant;REV__CNTLN|p.K1130Rfs*14|1|0.25|ENSG00000044459|chr9:17462996-17462996|A/-|frameshift_variant;REV__CNTLN|p.M1308*|1|0.36|ENSG00000044459|chr9:17484355-17484355|A/-|frameshift_variant;REV__CNTLN|p.M1308Nfs*9|1|0.46|ENSG00000044459|chr9:17484354-17484355|-/A|frameshift_variant;REV__CNTLN|p.T1324Dfs*27|1|0.14|ENSG00000044459|chr9:17484406-17484407|-/A|frameshift_variant;REV__ENSG00000044459|ENST00000380647|CNTLN;REV__nc|ENSG00000044459|Q9NXG0|CNTLN	57.81127852772723	1.7418937515398478	1				NaN	NaN	0	NaN	2869	3449	6317
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6321	22.385	NaN	1160.6	30	0	532.69	0.106	+			12751	GELEKLFQLGP	11	33	410.894287109375	NaN	0	410.894287109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GELEKLFQLGP_	ENSG00000250254|ENST00000504686|PTTG2;nc|ENSG00000250254|Q9NZH5|PTTG2	24.231819034082204	0.456735970842152	1				NaN	NaN	0	NaN	2870	3449	6317
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6322	22.387	NaN	21554	30	0	3151.2	0.106	+			37049	SIRVTQKSYK	10	92	417.90657536030324	1250.6978966811098	3	417.90673828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SIRVTQKSYK_	CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000550170.5_1_12:53294858-53298765:-|nuORF;KRT8|p.R18Gfs*56|1|0.24|ENSG00000170421|chr12:52904930-52904930|G/-|frameshift_variant;nc|ENSG00000170421|P05787-2|KRT8	104.42354056486148	0.06456012287859861	1				NaN	NaN	0	NaN	2871	3449	6317
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6323	22.389	NaN	2623.4	30	0	728.42	0.034			+	35741	SDSIIIVQG	9	54	466.25793665708335	930.5013203809667	2	466.25823974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SDSIIIVQG_	REV__ENSG00000107290|ENST00000224140|SETX;REV__nc|ENSG00000107290|Q7Z333-3|SETX;REV__nc|ENSG00000107290|Q7Z333-4|SETX;REV__SETX|p.F1748Sfs*3|1|0.55|ENSG00000107290|chr9:132326355-132326355|A/-|frameshift_variant;REV__SETX|p.G1134Efs*24|1|0.34|ENSG00000107290|chr9:132328199-132328199|T/-|frameshift_variant;REV__SETX|p.G1252Dfs*9|2|0.2|ENSG00000107290|chr9:132327843-132327843|C/-|frameshift_variant;REV__SETX|p.I2020Nfs*4|1|0.32|ENSG00000107290|chr9:132295919-132295920|-/T|frameshift_variant;REV__SETX|p.N1361Ifs*53|1|0.11|ENSG00000107290|chr9:132327516-132327516|T/-|frameshift_variant;REV__SETX|p.S1600*|1|0.07|ENSG00000107290|chr9:132326800-132326801|-/A|frameshift_variant;REV__SETX|p.T2478Sfs*35|1|0.35|ENSG00000107290|chr9:132264836-132264840|TATGG/-|frameshift_variant	51.33545320467046	0.2872990594074956	1				NaN	NaN	0	NaN	2872	3449	6317
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6324	22.389	NaN	1460.7	30	0	667.05	0.143	+			11431	FLTPSPTKR	9	33	349.53770103437887	1045.5912737033366	3	349.53778076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FLTPSPTKR_	ENSG00000090565|ENST00000262305|RAB11FIP3;nc|ENSG00000090565|O75154-2|RAB11FIP3	26.69291269510374	0.5537881896960711	1				NaN	NaN	0	NaN	2873	3449	6317
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6335	22.416	NaN	2731.2	30	0	392.63	0.214	+			12291	GCGGPLVGK	9	56	394.209800433889	786.405047934578	2	394.209716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GCGGPLVGK_	ENST00000331889.10_1_3:32726697-32726778:+|nuORF	55.50420428727701	0.2510918378945873	1				NaN	NaN	0	NaN	2881	3452	6334
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6336	22.42	NaN	2781.6	30	0	404.84	0.106	+			33825	RQTSILIQK	9	66	543.8347744555239	1085.6549959778476	2	543.8351440429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RQTSILIQK_	ENSG00000164266|ENST00000296695|SPINK1	65.46538089061403	0.16805504838372562	1				NaN	NaN	0	NaN	2882	3452	6334
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6337	22.422	NaN	1322.8	30	0	195.38	0.106	+			11520	FPEEDKKTY	9	48	578.7792136539128	1155.5438743746256	2	578.7808837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FPEEDKKTY_	ENSG00000151366|ENST00000281031|NDUFC2;nc|ENSG00000151366|O95298-2|NDUFC2	63.53385203322761	0.18415635464017938	1				NaN	NaN	0	NaN	2883	3452	6334
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6338	22.424	NaN	4511.3	30	0	1349.9	0.106	+			16921	HPLSDHEATL	10	56	560.2747091553088	1118.5348653774174	2	560.275146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HPLSDHEATL_	ENSG00000204525|ENST00000376228|HLA-C;ENST00000487245.5_1_6:31236948-31239147:-|nuORF;HLA-C|p.A269Gfs*66|1|0.07|ENSG00000204525|chr6:31270299-31270300|-/C|frameshift_variant;nc|ENSG00000204525|P10321-2|HLA-C	87.75429964447693	0.1439309699732727	1				NaN	NaN	0	NaN	2884	3452	6334
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6339	22.426	NaN	3477.8	30	0	453.72	0.106	+			1611	AGMALGIQK	9	55	452.7496007672284	903.4846486012568	2	452.7493896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_AGM(Oxidation (M))ALGIQK_	ENSG00000174851|ENST00000376901|YIF1A	133.4690685054315	0.013543987435668854	1				NaN	NaN	0	NaN	2885	3452	6334
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6340	22.427	NaN	609.98	30	0	157.06	0.034	+			14717	GTILSNVLK	9	35	472.79248046875	NaN	0	472.79248046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTILSNVLK_	ENSG00000111490|ENST00000539867|TBC1D30;nc|ENSG00000288591|Q9Y2I9-3|TBC1D30	20.94693142431847	0.3660861156085067	1				NaN	NaN	0	NaN	2886	3452	6334
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6341	22.428	NaN	750.45	30	0	50.736	0.14	+			20896	KIQWLEKL	8	49	529.3215942382812	NaN	0	529.3215942382812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KIQWLEKL_	TXLNA|p.R466W|1|0.08|ENSG00000084652|chr1:32194950-32194950|C/T|missense_variant	36.446750945000026	1.7418937515398478	1				NaN	NaN	0	NaN	2887	3452	6334
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6352	22.455	NaN	7709.6	30	0	1701.2	0.214	+			15039	GTNPGIITK	9	59	450.76085057888065	899.5071482245613	2	450.76092529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTNPGIITK_	ENSG00000136247|ENST00000335965|ZDHHC4;ENST00000474097.5_1_7:6620192-6623202:+|nuORF	104.01359247289065	0.03510646158778409	1				NaN	NaN	0	NaN	2895	3455	6351
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6353	22.459	NaN	11021	30	0	5967.4	0.106	+			40927	SVFSDKLHSK	10	50	383.2081189777125	1146.6025275333375	3	383.2086181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVFSDKLHSK_	ENSG00000187257|ENST00000334955|RSBN1L;nc|ENSG00000187257|Q6PCB5-2|RSBN1L;PTPN12-RSBN1L|1|fusion;PTPN12-RSBN1L|2|fusion;PTPN12-RSBN1L|3|fusion;PTPN12-RSBN1L|4|fusion;PTPN12-RSBN1L|5|fusion;PTPN12-RSBN1L|6|fusion;PTPN12-RSBN1L|7|fusion;PTPN12-RSBN1L|8|fusion	34.08650109265054	0.601467140718965	1				NaN	NaN	0	NaN	2896	3455	6351
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6354	22.46	NaN	1847.9	30	0	461.68	0.106				-1	LSHSNQMP	8	49	465.210795501456	928.407038069712	2	465.2108459472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_LSHSNQM(Oxidation (M))P_	BCL9|p.P1111Lfs*3|1|0.39|ENSG00000116128|chr1:147624005-147624005|G/-|frameshift_variant;BCL9|p.Q1139Rfs*138|1|0.37|ENSG00000116128|chr1:147624089-147624089|C/-|frameshift_variant;BCL9|p.Q1162Rfs*115|2|0.28|ENSG00000116128|chr1:147624156-147624156|G/-|frameshift_variant;ENSG00000116128|ENST00000234739|BCL9	35.200714571348534	0.6875396545722289	1				NaN	NaN	0	NaN	2897	3455	6351
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6355	22.462	NaN	586.34	30	0	36.102	0.106			+	10563	EYEDKVKK	8	43	519.77734375	NaN	0	519.77734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EYEDKVKK_	REV__ENSG00000112539|ENST00000230301|C6orf118	23.04248740728303	1.7418937515398478	1				NaN	NaN	0	NaN	2898	3455	6351
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6356	22.464	NaN	2263.2	30	0	342.15	0.106	+			43730	TKVRDDVY	8	51	498.26130433851694	994.5080557438339	2	497.9414367675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TKVRDDVY_	ENSG00000143669|ENST00000389793|LYST;ENST00000473037.5_1_1:235826242-235897989:-|nuORF;ENST00000475277.1_1_1:235876468-235887465:-|nuORF	37.15910966729921	0.6739408393984688	1				NaN	NaN	0	NaN	2899	3455	6351
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6357	22.466	NaN	2906.2	30	0	557.7	0.034			+	32218	QTAQFSPGK	9	59	482.24974970387694	962.4849464745539	2	482.7510681152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QTAQFSPGK_	REV__ENSG00000168546|ENST00000524240|GFRA2;REV__ENST00000306793.4_1_8:21550792-21640469:-|nuORF;REV__nc|ENSG00000168546|O00451-2|GFRA2;REV__nc|ENSG00000168546|O00451-3|GFRA2	61.691277971877994	0.19951612995419254	1				NaN	NaN	0	NaN	2900	3455	6351
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6368	22.491	NaN	54846	30	0	7540.5	0.214				-1	 	0	86	475.75603597197136	949.4975190107427	2	475.7559814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	2908	3458	6367
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6369	22.495	NaN	3691.2	30	0	1923.8	0.106			+	38012	SPLPPHSGPY	10	50	526.2638134098927	1050.5130738865853	2	526.2650146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SPLPPHSGPY_	REV__ENST00000409161.5_1_11:70507885-70508014:-|nuORF	35.61828744233558	0.588957954432594	1				NaN	NaN	0	NaN	2909	3458	6367
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6370	22.497	NaN	1440.8	30	0	752.87	0.036				-1	SVIMGNVLQS	10	29	355.18651724114784	NaN	0	355.1865539550781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_SVIM(Oxidation (M))GNVLQS_	ENSG00000167315|ENST00000285093|ACAA2	26.063383197487333	0.4145965855542893	1				NaN	NaN	0	NaN	2910	3458	6367
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6380	22.52	NaN	7447	30	0	2760.5	0.214	+			22436	KTLDQAKAVLK	11	67	405.5867876028303	1213.738533408691	3	405.5868225097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTLDQAKAVLK_	ENSG00000135372|ENST00000257829|NAT10;nc|ENSG00000135372|Q9H0A0-2|NAT10	54.343338949951054	0.37394860514808087	1				NaN	NaN	0	NaN	2917	3461	6379
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6381	22.524	NaN	6066.9	30	0	2069.7	0.106	+			15411	GTYHGMTLK	9	55	504.25211331003266	1006.4896736868653	2	504.2527770996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTYHGMTLK_	ENSG00000134371|ENST00000367435|CDC73	75.04331003522576	0.118981335847003	1				NaN	NaN	0	NaN	2918	3461	6379
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6382	22.525	NaN	1918.4	30	0	223.14	0.106	+			44031	TPNEERNVM	9	54	545.2529767291688	1088.4914005251376	2	545.2550048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TPNEERNVM_	ENSG00000184432|ENST00000333188|COPB2;nc|ENSG00000184432|P35606-2|COPB2	46.45678178249821	0.34452392205506005	1				NaN	NaN	0	NaN	2919	3461	6379
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6383	22.527	NaN	957.53	30	0	261.82	0.037			+	-1	NCSVTCPTRC	10	38	570.7320113591968	1139.4494697851935	2	570.732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_NC(Carbamidomethyl (C))SVTCPTRC_	REV__ENSG00000171564|ENST00000302068|FGB	30.317721548370564	0.6322445173429027	1				NaN	NaN	0	NaN	2920	3461	6379
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6394	22.552	NaN	2357.1	30	0	370.37	0.214			+	20678	KGNLVAVGAG	10	52	443.2614999806144	884.5084470280289	2	443.2624816894531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KGNLVAVGAG_	REV__ENSG00000116679|ENST00000367498|IVNS1ABP;REV__ENST00000459929.5_1_1:185267169-185275646:-|nuORF;REV__ENST00000480769.5_1_1:185267169-185274781:-|nuORF	102.7733458925114	0.06946074730680096	1				NaN	NaN	0	NaN	2928	3464	6393
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6395	22.556	NaN	646.72	30	0	99.276	0.034				-1	MDLNTKIA	8	46	461.23931884765625	NaN	0	461.23931884765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_M(Oxidation (M))DLNTKIA_	ENSG00000168702|ENST00000389484|LRP1B;LRP1B|p.C2682Vfs*15|1|0.3|ENSG00000168702|chr2:140516994-140516994|A/-|frameshift_variant;LRP1B|p.C3762Lfs*2|1|0.32|ENSG00000168702|chr2:140358089-140358090|-/A|frameshift_variant;LRP1B|p.G4130Mfs*20|1|0.06|ENSG00000168702|chr2:140324019-140324020|-/AT|frameshift_variant;LRP1B|p.H4368Tfs*4|1|0.47|ENSG00000168702|chr2:140274465-140274465|C/-|frameshift_variant;LRP1B|p.I3028Nfs*2|1|0.39|ENSG00000168702|chr2:140492645-140492646|-/T|frameshift_variant;LRP1B|p.K2543Nfs*42|1|0.08|ENSG00000168702|chr2:140536594-140536594|T/-|frameshift_variant;LRP1B|p.N3100Kfs*6|1|0.21|ENSG00000168702|chr2:140485468-140485469|-/T|frameshift_variant;LRP1B|p.N3434Tfs*84|1|0.47|ENSG00000168702|chr2:140442617-140442617|T/-|frameshift_variant;LRP1B|p.N4135Mfs*14|1|0.13|ENSG00000168702|chr2:140324003-140324003|T/-|frameshift_variant;LRP1B|p.N854Tfs*18|1|0.09|ENSG00000168702|chr2:140994078-140994078|T/-|frameshift_variant;LRP1B|p.R3957Kfs*11|2|0.15|ENSG00000168702|chr2:140350819-140350820|-/T|frameshift_variant;LRP1B|p.T2640Pfs*5|1|0.12|ENSG00000168702|chr2:140525952-140525952|T/-|frameshift_variant;LRP1B|p.Y3120*|1|0.16|ENSG00000168702|chr2:140485402-140485408|AGTAGGG/-|frameshift_variant	37.81151784470057	1.7418937515398478	1				NaN	NaN	0	NaN	2929	3464	6393
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6404	22.576	NaN	3559.7	30	0	383.52	0.214	+			2905	ASAYSIAQK	9	64	469.7496670902286	937.4847812472573	2	469.75030517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASAYSIAQK_	ENSG00000162813|ENST00000322067|BPNT1;nc|ENSG00000162813|O95861-2|BPNT1;nc|ENSG00000162813|O95861-4|BPNT1	104.01359247289065	0.03510646158778409	1				NaN	NaN	0	NaN	2935	3467	6403
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6405	22.58	NaN	3661.1	30	0	953.75	0.106	+			34460	RTYVGSMPGR	10	68	562.2867979809031	1122.559043028606	2	562.2877197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RTYVGSMPGR_	ENSG00000102910|ENST00000285737|LONP2;LONP2|p.D678Efs*7|1|0.07|ENSG00000102910|chr16:48347601-48347602|-/GT|frameshift_variant;nc|ENSG00000102910|Q86WA8-2|LONP2	66.96192283764107	0.30252237217063654	1				NaN	NaN	0	NaN	2936	3467	6403
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6406	22.582	NaN	1888.5	30	0	328.2	0.106	+			49455	VVVVNPQTK	9	45	492.2978062934473	982.5810596536946	2	492.2974853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVVVNPQTK_	ENSG00000177733|ENST00000314940|HNRNPA0	60.11826168202944	0.21262886028301267	1				NaN	NaN	0	NaN	2937	3467	6403
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6407	22.584	NaN	2214.1	30	0	705.34	0.106	+			50810	YERDHAVVV	9	48	544.2799411089865	1086.5453292847728	2	544.2813110351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YERDHAVVV_	ENSG00000105202|ENST00000221801|FBL;ENSG00000188573|ENST00000338333|FBLL1;FBL|p.K318Rfs*2|1|0.09|ENSG00000105202|chr19:39834553-39834553|G/-|frameshift_variant	46.45678178249821	0.34452392205506005	1				NaN	NaN	0	NaN	2938	3467	6403
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6408	22.585	NaN	1765.9	30	0	362.16	0.106			+	-1	PVQPSSLMGR	10	55	544.2799411089865	1086.5453292847728	2	545.25341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_PVQPSSLM(Oxidation (M))GR_	REV__GABRB3|p.L170Wfs*66|1|0.1|ENSG00000166206|chr15:26583368-26583368|G/-|frameshift_variant	37.81151784470057	0.569310847604193	1				NaN	NaN	0	NaN	2939	3467	6403
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6409	22.587	NaN	918.44	30	0	64.72	0.035			+	25134	LLRENEKQ	8	47	515.2890014648438	NaN	0	515.2890014648438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LLRENEKQ_	REV__ENSG00000152422|ENST00000396027|XRCC4;REV__ENST00000509268.1_1_5:82400738-82554497:+|nuORF;REV__ENST00000542685.5_1_5:82400738-82606644:+|nuORF;REV__nc|ENSG00000152422|Q13426-3|XRCC4;REV__nc|ENSG00000152422|Q13426|XRCC4;REV__XRCC4|p.L144P|1|0.09|ENSG00000152422|chr5:83195885-83195885|T/C|missense_variant	30.503639358989545	1.7418937515398478	1				NaN	NaN	0	NaN	2940	3467	6403
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6410	22.588	NaN	1610.4	30	0	168.38	0.14			+	13667	GNSKTAKCPI	10	58	509.772721574159	1017.530890215118	2	509.7714538574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GNSKTAKCPI_	REV__tr|U7T655|U7T655_FUSNUDNApolymerasebacteriophage-typeOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00113PE=3SV=1	58.2462437865262	0.38179041844353556	1				NaN	NaN	0	NaN	2941	3467	6403
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6421	22.615	NaN	6786.5	30	0	1160.5	0.214	+			39086	SSSSVLINK	9	61	467.76271224723723	933.5108715612745	2	467.7637023925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSSSVLINK_	ENSG00000120278|ENST00000696526|PLEKHG1	153.03582135801034	0.006161527642367307	1				NaN	NaN	0	NaN	2949	3470	6420
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6422	22.618	NaN	2892.4	30	0	431.74	0.106	+			36148	SEKVDRAVL	9	60	508.78999992973763	1015.5654469262753	2	508.7904357910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEKVDRAVL_	ENSG00000123240|ENST00000378747|OPTN;nc|ENSG00000123240|Q96CV9-2|OPTN;nc|ENSG00000123240|Q96CV9-3|OPTN	74.1650062923329	0.12277912660386392	1				NaN	NaN	0	NaN	2950	3470	6420
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6423	22.62	NaN	2989	30	0	1034.1	0.106	+			16907	HPLEGTHEL	9	52	516.7595164011806	1031.504479869161	2	516.7595825195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HPLEGTHEL_	ENSG00000122299|ENST00000355758|ZC3H7A;ENST00000571676.5_1_16:11858892-11864657:-|nuORF;ZC3H7A|p.I490Yfs*41|2|0.18|ENSG00000122299|chr16:11767471-11767471|T/-|frameshift_variant	60.97194046774394	0.20551255781574032	1				NaN	NaN	0	NaN	2951	3470	6420
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6424	22.622	NaN	2198.5	30	0	280.27	0.106	+			10765	FAGDDAPRA	9	54	460.21647900810353	NaN	0	460.2165832519531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FAGDDAPRA_	ACTA1|p.G22D|1|0.25|ENSG00000143632|chr1:229433051-229433051|C/T|missense_variant;ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196604|ENST00000409914|POTEF;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000473016.1_1_2:74120109-74129648:+|nuORF;ENST00000477812.1_1_7:5569027-5569288:-|nuORF;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000482085.1_1_10:90708534-90712518:-|nuORF;ENST00000488967.5_1_10:90706975-90712518:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;POTEE|p.N792Kfs*34|1|0.2|ENSG00000188219|chr2:131263828-131263829|-/A|frameshift_variant	79.71258880314673	0.07236858429579222	1				NaN	NaN	0	NaN	2952	3470	6420
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6425	22.624	NaN	2458.4	30	0	948.27	0.038	+			36972	SIMKWNRER	9	43	407.2168055837874	1218.6285873515621	3	407.2170715332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SIMKWNRER_	ENSG00000186010|ENST00000507754|NDUFA13;ENST00000511584.2_1_19:19627047-19637070:+|nuORF;ENST00000586674.1_1_19:19627047-19643527:+|nuORF;nc|ENSG00000186010|Q9P0J0-2|NDUFA13	31.529811441608018	0.5085848003137583	1				NaN	NaN	0	NaN	2953	3470	6420
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6436	22.648	NaN	2016.5	30	0	583.29	0.214	+			2969	ASFDKAKLK	9	58	504.29784671815446	NaN	0	504.2980041503906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASFDKAKLK_	ENSG00000034510|ENST00000233143|TMSB10	52.936696900407355	0.1864545979552969	1				NaN	NaN	0	NaN	2961	3473	6435
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6437	22.651	NaN	1291.8	30	0	163.87	0.106	+			21174	KKWKFKPI	8	50	537.8433701544269	NaN	0	537.8435668945312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KKWKFKPI_	tr|U7SRD6|U7SRD6_FUSNUProteinTonBOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01719PE=3SV=1	45.9519527083369	1.7418937515398478	1				NaN	NaN	0	NaN	2962	3473	6435
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6438	22.653	NaN	2656.9	30	0	413.9	0.034	+			24965	LLASEDRR	8	54	480.2672916143626	958.5200302955252	2	480.2674255371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LLASEDRR_	CDH1|p.P126Rfs*89|3|0.3|ENSG00000039068|chr16:68801878-68801878|C/-|frameshift_variant	26.79610172149135	0.7524337208463756	1				NaN	NaN	0	NaN	2963	3473	6435
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6449	22.678	NaN	12675	30	0	2156.5	0.214	+			23085	KVVDSLYNK	9	74	533.3005770717999	1064.5866012103997	2	533.3019409179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVVDSLYNK_	ENSG00000108671|ENST00000261712|PSMD11;ENST00000585265.1_1_17:30807457-30807646:+|nuORF;nc|ENSG00000108671|O00231-2|PSMD11	199.70438780651162	3.456851077920069E-05	1				NaN	NaN	0	NaN	2971	3476	6448
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6450	22.682	NaN	5827.5	30	0	737.79	0.106	+			35162	SAIDSVNATSK	11	61	546.7798809640566	1091.545208994913	2	546.7813720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAIDSVNATSK_	ENSG00000111641|ENST00000322166|NOP2;ENST00000537708.1_1_12:6669555-6669804:-|nuORF;ENST00000544630.1_1_12:6669555-6669953:-|nuORF;nc|ENSG00000111641|P46087-2|NOP2;nc|ENSG00000111641|P46087-3|NOP2;nc|ENSG00000111641|P46087-4|NOP2	139.15298810987372	0.0005758918642827448	1				NaN	NaN	0	NaN	2972	3476	6448
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6451	22.684	NaN	5385.8	30	0	837.93	0.106	+			19896	KEFDGKSL	8	62	462.2452076130699	922.4758622929398	2	462.2455139160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEFDGKSL_	ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;ENST00000517330.1_1_5:77337712-77337985:-|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P;nc|ENSG00000205940|Q58FF8|HSP90AB2P;nc|ENSG00000282100|Q58FF6|HSP90AB4P	148.98678547993487	0.23009633913008076	1				NaN	NaN	0	NaN	2973	3476	6448
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6452	22.686	NaN	1461.6	30	0	157.4	0.106			+	16667	HIIIFDVL	8	54	485.2901306152344	NaN	0	485.2901306152344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HIIIFDVL_	REV__ENSG00000074054|ENST00000696935|CLASP1;REV__nc|ENSG00000074054|Q7Z460-2|CLASP1;REV__nc|ENSG00000074054|Q7Z460-3|CLASP1;REV__nc|ENSG00000074054|Q7Z460-4|CLASP1;REV__nc|ENSG00000074054|Q7Z460-5|CLASP1;REV__nc|ENSG00000074054|Q7Z460|CLASP1	52.29916861842294	1.7418937515398478	1				NaN	NaN	0	NaN	2974	3476	6448
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6453	22.687	NaN	1718.3	30	0	174.78	0.106	+			44113	TPYEGQRSY	9	53	550.7540161081522	1099.4934792831043	2	550.755126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TPYEGQRSY_	ENSG00000005007|ENST00000262803|UPF1;nc|ENSG00000005007|Q92900|UPF1	42.86426827375447	0.38666266728046506	1				NaN	NaN	0	NaN	2975	3476	6448
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6454	22.689	NaN	955.42	30	0	136.06	0.033				-1	VFNGGAIC	8	38	419.19862706955394	NaN	0	419.1985168457031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_VFNGGAIC(Carbamidomethyl (C))_	nc|ENSG00000225997|P0C604|OR4A8	31.57888975003103	1.7418937515398478	1				NaN	NaN	0	NaN	2976	3476	6448
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6463	22.711	NaN	1922.8	30	0	227.11	0.214	+			21805	KRAMSKPI	8	57	465.7808002408989	929.5470475485978	2	465.78009033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KRAMSKPI_	ENST00000338785.7_1_21:38884979-38885171:+|nuORF	49.44154591367651	0.597725784090933	1				NaN	NaN	0	NaN	2982	3479	6462
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6464	22.714	NaN	2139.4	30	0	258.77	0.035	+			46694	VGKVGPARAGT	11	60	506.7984707294293	1011.5823885256586	2	506.79840087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VGKVGPARAGT_	ENST00000591735.2_1_19:1491211-1495711:+|nuORF	30.317721548370564	0.6717830234747728	1				NaN	NaN	0	NaN	2983	3479	6462
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6476	22.74	NaN	3394.7	30	0	1270.8	0.214	+			4359	ATGSVFTGK	9	48	434.2318912181818	866.4492295031636	2	434.2319641113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATGSVFTGK_	ENSG00000126790|ENST00000247194|L3HYPDH	93.5975768576971	0.05472259948179787	1				NaN	NaN	0	NaN	2992	3482	6475
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6477	22.744	NaN	1850.6	30	0	301.75	0.106			+	50955	YIEYIAGI	8	50	471.2539507995129	NaN	0	471.2545471191406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YIEYIAGI_	REV__tr|U7SLS3|U7SLS3_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01877PE=4SV=1	54.76467175910256	1.7418937515398478	1				NaN	NaN	0	NaN	2993	3482	6475
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6478	22.746	NaN	6834.3	30	0	2247	0.106	+			26206	LSSASALVPA	10	57	458.2606180848055	914.506683236411	2	458.2606201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSSASALVPA_	ENST00000373823.7_3_9:124043766-124064391:+|nuORF;ENST00000449733.7_1_9:124043766-124044726:+|nuORF	66.42927471994793	0.3073667423445326	1				NaN	NaN	0	NaN	2994	3482	6475
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6479	22.747	NaN	2175.2	30	0	206.02	0.106	+			2854	ASANLGGVPSK	11	58	500.774591895502	999.534630857804	2	500.7750244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASANLGGVPSK_	ENSG00000198843|ENST00000471696|SELENOT;ENST00000471696.5_2_3:150321089-150340178:+|nuORF;ENST00000485923.1_1_3:150321131-150321287:+|nuORF	82.83050618871818	0.12877585057862004	1				NaN	NaN	0	NaN	2995	3482	6475
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6480	22.749	NaN	1349.2	30	0	605.89	0.036			+	8937	EEWRLNLT	8	35	354.18508741262843	NaN	0	354.1850891113281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EEWRLNLT_	REV__ENSG00000161973|ENST00000293845|CCDC42;REV__nc|ENSG00000161973|Q96M95-2|CCDC42	32.81241826257853	1.7418937515398478	1				NaN	NaN	0	NaN	2996	3482	6475
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6490	22.771	NaN	19536	30	0	9230.3	0.214				-1	 	0	70	466.7556141493981	931.4966753655963	2	466.75555419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	3003	3485	6489
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6491	22.775	NaN	3228.9	30	0	589.81	0.106			+	44124	TQAFAQAIGAG	11	55	517.7686987564455	NaN	0	517.768798828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TQAFAQAIGAG_	REV__tr|U7SW15|U7SW15_FUSNU3-hydroxybutyryl-CoAdehydrogenaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01419PE=3SV=1	52.936696900407355	0.2942262773185686	1				NaN	NaN	0	NaN	3004	3485	6489
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6492	22.777	NaN	1172.3	30	0	272.66	0.036	+			11841	FSYRAALEY	9	49	560.2764282226562	NaN	0	560.2764282226562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FSYRAALEY_	ENSG00000153707|ENST00000381196|PTPRD;nc|ENSG00000153707|P23468-2|PTPRD;nc|ENSG00000153707|P23468-3|PTPRD;nc|ENSG00000153707|P23468-4|PTPRD;nc|ENSG00000153707|P23468-5|PTPRD;nc|ENSG00000153707|P23468-6|PTPRD;nc|ENSG00000153707|P23468-7|PTPRD	39.252832667884924	0.27938773122138094	1				NaN	NaN	0	NaN	3005	3485	6489
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6503	22.8	NaN	2333.4	30	0	290.12	0.214	+			1105	AELKIKRL	8	60	485.8241258754604	NaN	0	485.82427978515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AELKIKRL_	ENSG00000147604|ENST00000352983|RPL7	29.14955571784316	1.7418937515398478	1				NaN	NaN	0	NaN	3013	3488	6502
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6504	22.804	NaN	1077.5	30	0	745.11	0.106				-1	 	0	13	323.2013711395728	644.3881893459456	2	323.2013854980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	3014	3488	6502
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6505	22.806	NaN	1925.9	30	0	234.75	0.106			+	7752	DNKPIKVL	8	49	463.7868643771438	925.5591758210876	2	463.7868347167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DNKPIKVL_	REV__ELL2|p.H478Afs*4|1|0.2|ENSG00000118985|chr5:95898334-95898335|-/T|frameshift_variant;REV__ELL2|p.K468Nfs*8|1|0.32|ENSG00000118985|chr5:95898361-95898361|T/-|frameshift_variant;REV__ENSG00000118985|ENST00000237853|ELL2;REV__ENST00000413990.1_1_1:158146977-158147493:-|nuORF;REV__nc|ENSG00000118985|O00472-2|ELL2	42.396135135203025	0.6414440140393314	1				NaN	NaN	0	NaN	3015	3488	6502
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6506	22.808	NaN	1051.8	30	0	159.65	0.037	+			16321	HEKASFTNSE	10	49	575.2616215225449	1148.5086901118898	2	575.2622680664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HEKASFTNSE_	ENSG00000076201|ENST00000265562|PTPN23;PTPN23|p.L1014Pfs*68|1|0.36|ENSG00000076201|chr3:47410831-47410832|-/C|frameshift_variant;PTPN23|p.L1513Wfs*71|1|0.44|ENSG00000076201|chr3:47412805-47412805|G/-|frameshift_variant;PTPN23|p.P1258Rfs*2|1|0.28|ENSG00000076201|chr3:47411566-47411566|C/-|frameshift_variant;PTPN23|p.P750Lfs*53|2|0.06|ENSG00000076201|chr3:47410042-47410042|C/-|frameshift_variant;PTPN23|p.Y609*|1|0.31|ENSG00000076201|chr3:47409444-47409445|TA/-|frameshift_variant;PTPN23|p.Y998Tfs*162|1|0.34|ENSG00000076201|chr3:47410785-47410785|C/-|frameshift_variant	42.86426827375447	0.522752283233888	1				NaN	NaN	0	NaN	3016	3488	6502
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6518	22.833	NaN	15807	30	0	6314.2	0.214	+			39473	STFDTQITKK	10	52	390.21157496551973	1167.6128954967592	3	390.2117614746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STFDTQITKK_	ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC;PRKDC|p.D2437Wfs*3|1|0.11|ENSG00000253729|chr8:47840161-47840162|-/CA|frameshift_variant;PRKDC|p.K3681Nfs*6|1|0.32|ENSG00000253729|chr8:47785174-47785177|TTCT/-|frameshift_variant;PRKDC|p.M3670*|1|0.5|ENSG00000253729|chr8:47785212-47785212|T/-|frameshift_variant;PRKDC|p.M3846Cfs*12|1|0.13|ENSG00000253729|chr8:47779047-47779047|T/-|frameshift_variant;PRKDC|p.M4020Cfs*2|1|0.31|ENSG00000253729|chr8:47776968-47776968|T/-|frameshift_variant;PRKDC|p.N3605Kfs*3|1|0.22|ENSG00000253729|chr8:47788993-47788994|-/T|frameshift_variant;PRKDC|p.N4037Ifs*15|1|0.17|ENSG00000253729|chr8:47776916-47776916|T/-|frameshift_variant;PRKDC|p.R2704Gfs*13|2|0.34|ENSG00000253729|chr8:47834238-47834238|T/-|frameshift_variant;PRKDC|p.S3402Ifs*16|1|0.04|ENSG00000253729|chr8:47799302-47799303|-/AAACCGTGAGTTAGAGGAGGTAA|frameshift_variant;PRKDC|p.S4099Qfs*6|1|0.25|ENSG00000253729|chr8:47774265-47774265|A/-|frameshift_variant;PRKDC|p.T3268Pfs*7|1|0.5|ENSG00000253729|chr8:47803426-47803426|T/-|frameshift_variant;PRKDC|p.W3401Cfs*4|1|0.01|ENSG00000253729|chr8:47799304-47799305|-/AATGAATA|frameshift_variant	34.08650109265054	0.601467140718965	1				NaN	NaN	0	NaN	3025	3491	6517
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6519	22.837	NaN	8004.6	30	0	1482.4	0.106	+			24494	LGHQYLVEK	9	74	362.8694137330043	1085.586411799213	3	362.8694763183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LGHQYLVEK_	tr|U7T8F8|U7T8F8_FUSNU[Citrate[pro-3S]-lyase]ligaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00040PE=4SV=1	49.44154591367651	0.3095138337212152	1				NaN	NaN	0	NaN	3026	3491	6517
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6520	22.839	NaN	3787.3	30	0	873.78	0.106	+			29667	PGPKPLVRTS	10	45	351.21326594339837	1050.6179684303952	3	351.21337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PGPKPLVRTS_	ENSG00000162063|ENST00000397066|CCNF	26.063383197487333	0.6669871633831898	1				NaN	NaN	0	NaN	3027	3491	6517
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6521	22.84	NaN	3880.5	30	0	2124.6	0.106			+	16784	HPAIGLNE	8	45	425.7242565188377	849.4339601044754	2	425.72430419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HPAIGLNE_	REV__ENSG00000198722|ENST00000635942|UNC13B	35.200714571348534	0.6875396545722289	1				NaN	NaN	0	NaN	3028	3491	6517
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6522	22.842	NaN	1735.3	30	0	436.18	0.106	+			41946	SVVSSVTTK	9	51	454.2580475155911	906.5015420979822	2	454.2579650878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVVSSVTTK_	ENSG00000135124|ENST00000337233|P2RX4;ENST00000499638.6_1_12:121647946-121660004:+|nuORF;nc|ENSG00000135124|Q99571-2|P2RX4;nc|ENSG00000135124|Q99571-3|P2RX4;P2RX4|p.T223Qfs*13|1|0.34|ENSG00000135124|chr12:121228783-121228783|A/-|frameshift_variant	69.6276240434122	0.14239879520340665	1				NaN	NaN	0	NaN	3029	3491	6517
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6523	22.844	NaN	4877.4	30	0	1052.9	0.106			+	43693	TKIGYVGNEGI	11	47	384.2081786781456	1149.602706634637	3	384.209228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TKIGYVGNEGI_	REV__tr|U7SYX7|U7SYX7_FUSNUD-alanyl-D-alaninecarboxypeptidase(Penicillin-bindingprotein5/6)OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00797PE=3SV=1	38.714083909724	0.5755383074156426	1				NaN	NaN	0	NaN	3030	3491	6517
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6524	22.846	NaN	1366.1	30	0	237.64	0.034			+	35490	SATLRHPAI	9	46	483.2797865268188	NaN	0	483.2801208496094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SATLRHPAI_	REV__ENST00000303531.11_2_16:24229660-24229813:+|nuORF	42.86426827375447	0.2558691296974908	1				NaN	NaN	0	NaN	3031	3491	6517
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6530	22.862	NaN	9434.8	30	0	2525.5	0.214	+			5673	AVDTAYVAK	9	64	469.25303937800567	936.4915258228114	2	469.25299072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVDTAYVAK_	ENSG00000174851|ENST00000376901|YIF1A;ENST00000376899.8_1_11:66054976-66056456:-|nuORF;YIF1A|p.R131Gfs*50|3|0.43|ENSG00000174851|chr11:66287634-66287634|G/-|frameshift_variant	93.1432384553994	0.056003526918089595	1				NaN	NaN	0	NaN	3034	3494	6529
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6531	22.866	NaN	1765.1	30	0	343.9	0.106			+	21479	KNIPIVTG	8	48	421.2607374848137	NaN	0	421.2605895996094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KNIPIVTG_	REV__ENST00000585812.5_1_17:59431721-59456358:+|nuORF;REV__ENST00000587872.1_1_17:59456286-59456358:+|nuORF	76.84663266511073	1.7418937515398478	1				NaN	NaN	0	NaN	3035	3494	6529
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6532	22.868	NaN	3878.7	30	0	1041.4	0.106			+	14819	GTLGTSVADK	10	59	474.7532954970167	947.4920380608335	2	474.7530517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTLGTSVADK_	REV__ENSG00000167676|ENST00000301286|PLIN4;REV__ENSG00000167676|ENST00000301286|PLIN4;REV__ENSG00000167676|ENST00000301286|PLIN4;REV__ENSG00000167676|ENST00000301286|PLIN4;REV__PLIN4|p.A561Qfs*13|1|0.1|ENSG00000167676|chr19:4512237-4512237|C/-|frameshift_variant;REV__PLIN4|p.A561Qfs*13|1|0.1|ENSG00000167676|chr19:4512237-4512237|C/-|frameshift_variant;REV__PLIN4|p.G1001Afs*9|1|0.16|ENSG00000167676|chr19:4510916-4510916|C/-|frameshift_variant;REV__PLIN4|p.G1001Afs*9|1|0.16|ENSG00000167676|chr19:4510916-4510916|C/-|frameshift_variant;REV__PLIN4|p.G1001Afs*9|1|0.16|ENSG00000167676|chr19:4510916-4510916|C/-|frameshift_variant;REV__PLIN4|p.G1001Afs*9|1|0.16|ENSG00000167676|chr19:4510916-4510916|C/-|frameshift_variant;REV__PLIN4|p.G374Afs*35|1|0.53|ENSG00000167676|chr19:4512797-4512797|C/-|frameshift_variant	60.11826168202944	0.36476464221954025	1				NaN	NaN	0	NaN	3036	3494	6529
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6533	22.869	NaN	5415.7	30	0	726.55	0.106				-1	VSKNCNLGK	9	60	510.2673569037223	1018.5201608742447	2	510.26727294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_VSKNC(Carbamidomethyl (C))NLGK_	ENSG00000169876|ENST00000306151|MUC17;nc|ENSG00000169876|Q685J3-2|MUC17	54.776311868738084	0.25715957988447635	1				NaN	NaN	0	NaN	3037	3494	6529
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6534	22.871	NaN	4768.6	30	0	3072.8	0.106			+	13485	GLLQGLVLAQ	10	35	337.87789201125156	1010.6118466339547	3	337.87835693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GLLQGLVLAQ_	REV__ENSG00000169247|ENST00000515425|SH3TC2;REV__ENST00000504517.5_1_5:148386573-148411207:-|nuORF;REV__ENST00000510779.1_1_5:148384276-148408226:-|nuORF;REV__nc|ENSG00000169247|Q8TF17-4|SH3TC2;REV__nc|ENSG00000169247|Q8TF17-5|SH3TC2	56.43379154798735	0.3982744522255666	1				NaN	NaN	0	NaN	3038	3494	6529
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6535	22.873	NaN	1980.5	30	0	719.98	0.106			+	47819	VSKKSVSVLG	10	29	335.20951575510264	1002.606717865508	3	335.2096862792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VSKKSVSVLG_	REV__ENSG00000124003|ENST00000446656|MOGAT1	20.94693142431847	0.7087701759873708	1				NaN	NaN	0	NaN	3039	3494	6529
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6536	22.875	NaN	1567.5	30	0	202.48	0.034	+			41325	SVLRRFST	8	52	483.2790832519531	NaN	0	483.2790832519531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVLRRFST_	ENST00000486327.6_1_19:47879673-47879823:+|nuORF	39.252832667884924	1.7418937515398478	1				NaN	NaN	0	NaN	3040	3494	6529
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6548	22.9	NaN	7829.2	30	0	1016.1	0.214	+			28768	NPEHASVAM	9	58	478.21866391876466	954.4227749043293	2	478.2188415527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NPEHASVAM_	ENSG00000102317|ENST00000376759|RBM3;ENST00000466764.5_1_X:48433568-48434262:+|nuORF;ENST00000488216.5_1_X:48433568-48434199:+|nuORF;ENST00000491240.5_1_X:48433911-48434199:+|nuORF	60.97194046774394	0.20551255781574032	1				NaN	NaN	0	NaN	3049	3497	6547
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6549	22.904	NaN	947.7	30	0	120.04	0.106	+			35928	SEGIKHVL	8	37	441.7556359283772	881.4967189235545	2	441.7555847167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEGIKHVL_	ENSG00000165475|ENST00000298248|CRYL1;nc|ENSG00000165475|Q9Y2S2-2|CRYL1	71.37791200682192	0.3954169775488141	1				NaN	NaN	0	NaN	3050	3497	6547
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6550	22.906	NaN	1679.2	30	0	347.96	0.106	+			40104	STNYNPSLK	9	51	512.2585826417562	1022.5026123503125	2	512.2599487304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STNYNPSLK_	nc|ENSG00000211956|P06331|IGHV4-34;nc|ENSG00000211970|A0A0C4DH41|IGHV4-61;nc|ENSG00000224373|P01825|IGHV4-59;nc|ENSG00000276775|A0A075B6R2|IGHV4-4	38.753607047826485	0.4348790777924195	1				NaN	NaN	0	NaN	3051	3497	6547
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6551	22.908	NaN	827.63	30	0	130.43	0.106	+			25363	LPGDHEYP	8	41	464.2156760530305	926.416799172861	2	464.2159118652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LPGDHEYP_	ENSG00000168538|ENST00000334690|TRAPPC11;ENST00000504526.1_1_4:184580477-184587420:+|nuORF;ENST00000509857.5_1_4:184585182-184595983:+|nuORF;nc|ENSG00000168538|Q7Z392-3|TRAPPC11;nc|ENSG00000168538|Q7Z392-4|TRAPPC11;TRAPPC11|p.T366Pfs*9|1|0.25|ENSG00000168538|chr4:183680246-183680246|A/-|frameshift_variant	29.841539824830324	0.7289191502596711	1				NaN	NaN	0	NaN	3052	3497	6547
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6552	22.909	NaN	617.98	30	0	99.682	0.106			+	-1	VSKCCIKF	8	38	492.7536315917969	NaN	0	492.7536315917969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_VSKC(Carbamidomethyl (C))CIKF_	REV__ZNF479|p.K127I|1|0.28|ENSG00000185177|chr7:57121035-57121035|T/A|missense_variant	27.882242232435846	1.7418937515398478	1				NaN	NaN	0	NaN	3053	3497	6547
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6553	22.911	NaN	1145.8	30	0	161.24	0.106	+			21075	KKLSDGTF	8	43	448.2476501464844	NaN	0	448.2476501464844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KKLSDGTF_	ENSG00000204104|ENST00000373327|TRAF3IP1;nc|ENSG00000204104|Q8TDR0-2|TRAF3IP1	33.51558372728122	1.7418937515398478	1				NaN	NaN	0	NaN	3054	3497	6547
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6554	22.913	NaN	1036.7	30	0	114.73	0.035				-1	VMPPQFKK	8	50	495.77727169261647	989.539990452033	2	495.7774353027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_VM(Oxidation (M))PPQFKK_	ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1	26.79610172149135	0.7524337208463756	1				NaN	NaN	0	NaN	3055	3497	6547
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6565	22.937	NaN	3147.2	30	0	236.59	0.214	+			49729	VYNNNSSRF	9	65	550.759444329996	1099.5043357267919	2	551.261962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYNNNSSRF_	ENSG00000145555|ENST00000513610|MYO10;MYO10|p.G1223Rfs*28|1|0.25|ENSG00000145555|chr5:16694504-16694505|-/T|frameshift_variant;MYO10|p.I417Tfs*39|1|0.05|ENSG00000145555|chr5:16764326-16764327|-/ACAAATCTCTG|frameshift_variant;MYO10|p.N507Qfs*30|1|0.11|ENSG00000145555|chr5:16762613-16762614|-/TG|frameshift_variant;MYO10|p.S468Ffs*8|1|0.05|ENSG00000145555|chr5:16763679-16763680|-/A|frameshift_variant	58.22992032128504	0.22837015374068087	1				NaN	NaN	0	NaN	3063	3500	6564
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6566	22.94	NaN	2502.6	30	0	441.22	0.036	+			344	AAQDSTDLVAK	11	63	559.7885235277738	1117.5624941223475	2	559.788330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAQDSTDLVAK_	ENSG00000120438|ENST00000321394|TCP1;ENST00000546204.1_1_6:160200657-160201127:-|nuORF	77.28774426308219	0.17498409934748582	1				NaN	NaN	0	NaN	3064	3500	6564
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6574	22.96	NaN	2167.9	30	0	181.26	0.214	+			21081	KKMLGLKGNGG	11	68	551.8234776590546	1101.632402384909	2	551.8248291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KKMLGLKGNGG_	ENSG00000121964|ENST00000682281|GTDC1;ENST00000491448.5_1_2:144764747-144969145:-|nuORF;GTDC1|p.F302Lfs*4|2|0.29|ENSG00000121964|chr2:143970732-143970732|A/-|frameshift_variant;GTDC1|p.K303*|1|0.26|ENSG00000121964|chr2:143970731-143970732|-/A|frameshift_variant;GTDC1|p.R414Gfs*12|1|0.41|ENSG00000121964|chr2:143952035-143952035|T/-|frameshift_variant;nc|ENSG00000121964|Q4AE62-2|GTDC1;nc|ENSG00000121964|Q4AE62-3|GTDC1;nc|ENSG00000121964|Q4AE62-4|GTDC1;nc|ENSG00000121964|Q4AE62-5|GTDC1;nc|ENSG00000121964|Q4AE62-6|GTDC1	62.107414245175825	0.30464354921554965	1				NaN	NaN	0	NaN	3069	3503	6573
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6575	22.964	NaN	2992.4	30	0	536.96	0.046				-1	 	0	57	589.5945352941039	1765.7617764825118	3	589.9295043945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	3070	3503	6573
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6586	22.989	NaN	2639.6	30	0	673.51	0.214	+			22428	KTLDAEVVEK	10	56	566.3177107509085	NaN	0	566.3178100585938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTLDAEVVEK_	ENSG00000185049|ENST00000382882|NELFA;ENST00000463820.5_1_4:1985048-1993691:-|nuORF;ENST00000467661.5_1_4:1985048-1988196:-|nuORF;nc|ENSG00000185049|Q9H3P2-7|NELFA;NELFA|p.P411Rfs*67|1|0.23|ENSG00000185049|chr4:1983918-1983918|G/-|frameshift_variant	72.09557110113691	0.1383596426166609	1				NaN	NaN	0	NaN	3078	3506	6585
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6587	22.993	NaN	2316.9	30	0	504.46	0.106	+			35028	SADDRCKVL	9	58	503.75320886035774	1005.4918647875155	2	503.7538146972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SADDRCKVL_	ENSG00000111605|ENST00000435070|CPSF6;nc|ENSG00000111605|Q16630-2|CPSF6;nc|ENSG00000111605|Q16630-3|CPSF6	42.86426827375447	0.38666266728046506	1				NaN	NaN	0	NaN	3079	3506	6585
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6588	22.995	NaN	1276.7	30	0	197.25	0.106	+			34623	RVQDYIQSK	9	52	568.8069328900425	1135.599312846885	2	568.80810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RVQDYIQSK_	ENSG00000123836|ENST00000367080|PFKFB2;ENST00000411990.6_1_1:207235951-207252361:+|nuORF;nc|ENSG00000123836|O60825-2|PFKFB2	80.45461616416974	0.09558281504443908	1				NaN	NaN	0	NaN	3080	3506	6585
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6589	22.997	NaN	2035	30	0	366.94	0.106	+			4497	ATITERGITSR	11	33	402.226522308884	NaN	0	402.2266845703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATITERGITSR_	EMC1|p.F974Lfs*4|1|0.22|ENSG00000127463|chr1:19219363-19219363|A/-|frameshift_variant;ENSG00000127463|ENST00000477853|EMC1;nc|ENSG00000127463|Q8N766-2|EMC1;nc|ENSG00000127463|Q8N766-3|EMC1;nc|ENSG00000127463|Q8N766-4|EMC1	30.568863376406313	0.42918353898720446	1				NaN	NaN	0	NaN	3081	3506	6585
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6590	22.998	NaN	771.19	30	0	189.48	0.034			+	-1	IGTFFGLL	8	37	455.2566223144531	NaN	0	455.2566223144531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))IGTFFGLL_	REV__ADCY8|p.G213C|1|0.31|ENSG00000155897|chr8:131039697-131039697|C/A|missense_variant;REV__ADCY8|p.K212T|1|0.19|ENSG00000155897|chr8:131039699-131039699|T/G|missense_variant;REV__ADCY8|p.T500Sfs*10|1|0.44|ENSG00000155897|chr8:130909849-130909850|-/TCCTTGAC|frameshift_variant;REV__ADCY8|p.V224A|1|0.26|ENSG00000155897|chr8:131039663-131039663|A/G|missense_variant;REV__ENSG00000155897|ENST00000286355|ADCY8	37.028477286268924	1.7418937515398478	1				NaN	NaN	0	NaN	3082	3506	6585
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6603	23.025	NaN	1318.9	30	0	337.85	0.214	+			38634	SSHMVTFEK	9	47	533.255859375	NaN	0	533.255859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSHMVTFEK_	ENST00000517402.1_1_7:27222251-27222365:-|nuORF	56.43379154798735	0.16452882468284893	1				NaN	NaN	0	NaN	3092	3509	6602
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6604	23.028	NaN	1565.6	30	0	152.54	0.035	+			7473	DGARKEAQI	9	48	494.2659888080202	986.5174246828404	2	494.2659606933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DGARKEAQI_	ENST00000510479.5_1_5:176948978-176959043:-|nuORF	37.81151784470057	0.4459294069877048	1				NaN	NaN	0	NaN	3093	3509	6602
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6612	23.048	NaN	14390	30	0	5054.7	0.214	+			18839	IVAGTLTNK	9	58	458.7764725524987	915.5383921717975	2	458.7770080566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IVAGTLTNK_	DAZAP1-NDUFS7|1|fusion;ENSG00000115286|ENST00000233627|NDUFS7;ENST00000436115.6_1_19:1390815-1393403:+|nuORF;ENST00000538523.5_1_19:1387763-1393403:+|nuORF;ENST00000538662.5_1_19:1383907-1391085:+|nuORF;ENST00000543289.5_1_19:1388688-1391085:+|nuORF;ENST00000545446.5_1_19:1388688-1393403:+|nuORF;nc|ENSG00000115286|O75251-2|NDUFS7	145.15565482312357	0.00806134135205793	1				NaN	NaN	0	NaN	3098	3512	6611
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6613	23.052	NaN	2006	30	0	438.24	0.106	+			44500	TSSLVPPYL	9	47	488.76931089991257	975.5240688666252	2	488.76953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TSSLVPPYL_	ENSG00000136813|ENST00000684092|ECPAS;nc|ENSG00000136813|Q5VYK3|ECPAS	76.7741389293348	0.11149722112137898	1				NaN	NaN	0	NaN	3099	3512	6611
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6614	23.054	NaN	2175.1	30	0	325.25	0.034	+			1648	AGPLERSQL	9	51	485.7690984723513	969.5236440115026	2	485.7701110839844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AGPLERSQL_	ENST00000249923.7_1_11:14497478-14498490:-|nuORF	34.172542307311794	0.4838870758800184	1				NaN	NaN	0	NaN	3100	3512	6611
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6623	23.074	NaN	7661.1	30	0	1548.9	0.214	+			16153	HEAERNIAL	9	71	526.7774741083432	1051.5403952834863	2	526.7772827148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HEAERNIAL_	ENSG00000015568|ENST00000016946|RGPD5;ENSG00000153165|ENST00000409886|RGPD3;ENSG00000153201|ENST00000283195|RANBP2;ENSG00000169629|ENST00000302558|RGPD8;ENSG00000183054|ENST00000329516|RGPD6;ENSG00000185304|ENST00000398146|RGPD2;ENSG00000187627|ENST00000641458|RGPD1;ENSG00000196862|ENST00000408999|RGPD4;nc|ENSG00000183054|Q99666-2|RGPD5;nc|ENSG00000187627|P0DJD0|RGPD1;nc|ENSG00000196862|Q7Z3J3-2|RGPD4;RANBP2|p.A864Lfs*3|1|0.3|ENSG00000153201|chr2:108758533-108758533|G/-|frameshift_variant;RANBP2|p.C2737Vfs*35|1|0.18|ENSG00000153201|chr2:108772957-108772957|T/-|frameshift_variant;RANBP2|p.F3068Lfs*10|1|0.06|ENSG00000153201|chr2:108782692-108782692|T/-|frameshift_variant;RANBP2|p.H3114Sfs*18|1|0.33|ENSG00000153201|chr2:108782827-108782828|-/T|frameshift_variant;RANBP2|p.K1989Nfs*9|1|0.05|ENSG00000153201|chr2:108766505-108766506|-/TATCCTG|frameshift_variant;RANBP2|p.K2576Nfs*63|2|0.22|ENSG00000153201|chr2:108768262-108768262|A/-|frameshift_variant;RANBP2|p.S1486Rfs*51|1|0.05|ENSG00000153201|chr2:108764996-108764997|-/ATTTTGTATTC|frameshift_variant;RGPD2|p.F1350Lfs*25|1|0.25|ENSG00000185304|chr2:87782974-87782974|A/-|frameshift_variant;RGPD3|p.V1441*|1|0.45|ENSG00000153165|chr2:106423647-106423647|T/-|frameshift_variant;RGPD4|p.K568Nfs*33|1|0.14|ENSG00000196862|chr2:107859787-107859787|A/-|frameshift_variant	85.16082228582465	0.07850854922700509	1				NaN	NaN	0	NaN	3106	3515	6622
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6624	23.078	NaN	14216	30	0	3932.6	0.106	+			44860	TTVDIFHKK	9	60	363.54122503831223	1087.6018457151367	3	363.5413513183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTVDIFHKK_	ENSG00000158411|ENST00000289359|MITD1	42.86426827375447	0.38666266728046506	1				NaN	NaN	0	NaN	3107	3515	6622
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6625	23.079	NaN	965.56	30	0	76.433	0.033	+			40588	SVAGIRTGE	9	39	445.2403735526366	NaN	0	445.24066162109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVAGIRTGE_	ENST00000554997.1_1_14:64676435-64676651:+|nuORF	63.53385203322761	0.134247007536971	1				NaN	NaN	0	NaN	3108	3515	6622
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6632	23.097	NaN	3883	30	0	634.36	0.214	+			40801	SVDVHQVYK	9	66	537.7828630117682	NaN	0	537.7830200195312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVDVHQVYK_	ENSG00000186314|ENST00000683046|PRELID2;ENST00000394450.6_1_5:145205751-145214847:-|nuORF;ENST00000515475.1_1_5:145199495-145214847:-|nuORF;nc|ENSG00000186314|Q8N945|PRELID2;PRELID2|p.N28Tfs*10|1|0.28|ENSG00000186314|chr5:145823129-145823129|G/-|frameshift_variant	85.16082228582465	0.053699699744190164	1				NaN	NaN	0	NaN	3112	3518	6631
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6633	23.101	NaN	2160.7	30	0	484.27	0.106			+	17308	IAELGSLSLPA	11	44	357.53987022671595	NaN	0	357.5404357910156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IAELGSLSLPA_	REV__B2M|p.L12P|1|0.17|ENSG00000166710|chr15:44711581-44711581|T/C|missense_variant	25.125986553469783	0.45344013546260314	1				NaN	NaN	0	NaN	3113	3518	6631
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6634	23.103	NaN	1493.3	30	0	545.86	0.038	+			51468	YVHDDGRVSY	10	39	605.7769170205728	1209.5392811079455	2	605.7796020507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YVHDDGRVSY_	ENSG00000130755|ENST00000597595|GMFG;ENST00000601731.1_1_19:39819119-39826633:-|nuORF	41.42661286455405	0.5359995577334734	1				NaN	NaN	0	NaN	3114	3518	6631
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6645	23.128	NaN	29845	30	0	13869	0.214				-1	LCSHSLTLLG	10	54	367.5301427705316	1099.5685989117949	3	367.5303039550781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_LC(Carbamidomethyl (C))SHSLTLLG_	ENST00000493195.5_1_1:159902482-159902782:-|nuORF	41.42661286455405	0.5359995577334734	1				NaN	NaN	0	NaN	3122	3521	6644
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6646	23.132	NaN	3526.2	30	0	1269.9	0.106				-1	 	0	44	427.24777191136513	852.4809908895303	2	427.2477111816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	3123	3521	6644
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6647	23.134	NaN	1765.6	30	0	304.12	0.106	+			5774	AVGPPTTVR	9	42	449.26090195745627	896.5072509817126	2	449.26080322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVGPPTTVR_	ENSG00000137573|ENST00000402687|SULF1;ENST00000521946.5_1_8:70505207-70554528:+|nuORF	39.252832667884924	0.4290233611298554	1				NaN	NaN	0	NaN	3124	3521	6644
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6648	23.136	NaN	1684.3	30	0	311.33	0.106	+			36836	SIFEPAKGGEK	11	48	581.8081947984142	1161.6018366636283	2	581.8084716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SIFEPAKGGEK_	ENSG00000160710|ENST00000368474|ADAR;nc|ENSG00000160710|P55265-2|ADAR;nc|ENSG00000160710|P55265-3|ADAR;nc|ENSG00000160710|P55265-4|ADAR;nc|ENSG00000160710|P55265-5|ADAR	74.23689240530636	0.2004180839732798	1				NaN	NaN	0	NaN	3125	3521	6644
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6649	23.137	NaN	1467.4	30	0	173.08	0.106	+			19743	KDVKVQVM	8	55	473.773268124028	945.531983314856	2	473.77288818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KDVKVQVM_	ENSG00000131236|ENST00000372805|CAP1;ENST00000461993.1_1_1:40535258-40537202:+|nuORF;nc|ENSG00000131236|Q01518-2|CAP1	49.44154591367651	0.597725784090933	1				NaN	NaN	0	NaN	3126	3521	6644
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6650	23.139	NaN	1310.4	30	0	262.48	0.036	+			8909	EEVEVEQVQ	9	58	544.7610215951387	NaN	0	544.761474609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EEVEVEQVQ_	ENSG00000100379|ENST00000403888|KCTD17;ENST00000462640.1_1_22:37453452-37456991:+|nuORF;nc|ENSG00000100379|Q8N5Z5-2|KCTD17	40.77816245573522	0.2702456086868081	1				NaN	NaN	0	NaN	3127	3521	6644
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6651	23.14	NaN	1113.4	30	0	70.099	0.146			+	46728	VGPLSSTH	8	47	399.21017525897423	NaN	0	399.2104797363281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VGPLSSTH_	REV__MER65-int_dup830|chr19:41731202-41731711:+|2.2615833292983227|0.0105726313913534|7.74|478.0|16|3|sense	37.028477286268924	1.7418937515398478	1				NaN	NaN	0	NaN	3128	3521	6644
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6663	23.167	NaN	14173	30	0	2735.3	0.214	+			4622	ATLNVSTTR	9	69	481.7663427789153	961.5181326246307	2	481.7664489746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATLNVSTTR_	ENSG00000088448|ENST00000267339|ANKRD10;ENST00000460846.1_1_13:111557570-111567134:-|nuORF;nc|ENSG00000088448|Q9NXR5-2|ANKRD10	122.93914200107957	0.019420478173996256	1				NaN	NaN	0	NaN	3137	3524	6662
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6664	23.171	NaN	1753.9	30	0	372.84	0.106	+			37037	SIREYLVK	8	52	504.29784671815446	NaN	0	504.2979736328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SIREYLVK_	CCDC102B|p.N420Tfs*5|3|0.26|ENSG00000150636|chr18:68897418-68897418|A/-|frameshift_variant;ENSG00000150636|ENST00000360242|CCDC102B;ENST00000577772.5_1_18:66504000-66564823:+|nuORF;nc|ENSG00000150636|Q68D86-2|CCDC102B	35.61828744233558	1.7418937515398478	1				NaN	NaN	0	NaN	3138	3524	6662
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6665	23.173	NaN	2440.1	30	0	287.45	0.106	+			5540	AVAKNQALK	9	62	471.7897459499148	941.5649389666296	2	471.78961181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVAKNQALK_	ENSG00000131473|ENST00000352035|ACLY;nc|ENSG00000131473|P53396-2|ACLY;nc|ENSG00000131473|P53396-3|ACLY	40.5726180659479	0.4135428067754104	1				NaN	NaN	0	NaN	3139	3524	6662
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6666	23.175	NaN	10794	30	0	2958.4	0.106	+			4486	ATITDKELLKK	11	74	420.59012541652794	1258.748546849784	3	420.59039306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATITDKELLKK_	ENSG00000131503|ENST00000360839|ANKHD1;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	97.59673978297657	0.06767575942783079	1				NaN	NaN	0	NaN	3140	3524	6662
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6667	23.176	NaN	1263.3	30	0	204.81	0.106	+			39370	STDDSAVPPP	10	53	493.22704181770797	984.439530702216	2	493.7278747558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STDDSAVPPP_	ENSG00000186187|ENST00000335325|ZNRF1;nc|ENSG00000186187|Q8ND25-2|ZNRF1;ZNRF1|p.V67Cfs*96|2|0.17|ENSG00000186187|chr16:74999864-74999864|G/-|frameshift_variant	34.172542307311794	0.6007644933930345	1				NaN	NaN	0	NaN	3141	3524	6662
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6668	23.178	NaN	532.17	30	0	49.168	0.037	+			11521	FPEEDKKTY	9	37	578.7800903320312	NaN	0	578.7800903320312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FPEEDKKTY_	ENSG00000151366|ENST00000281031|NDUFC2;nc|ENSG00000151366|O95298-2|NDUFC2	41.42661286455405	0.26577678759562784	1				NaN	NaN	0	NaN	3142	3524	6662
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6679	23.204	NaN	34324	30	0	18226	0.214	+			17395	IAPTGHSL	8	46	398.22122206548227	794.4278911977646	2	398.2215270996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IAPTGHSL_	ENSG00000125354|ENST00000394610|SEPTIN6;ENSG00000138758|ENST00000264893|SEPTIN11;nc|ENSG00000125354|Q14141-3|SEPTIN6;nc|ENSG00000125354|Q14141-4|SEPTIN6;nc|ENSG00000125354|Q14141|SEPTIN6;nc|ENSG00000138758|Q9NVA2-2|SEPTIN11	76.84663266511073	0.3498490246073164	1				NaN	NaN	0	NaN	3150	3527	6678
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6680	23.207	NaN	10630	30	0	7079.3	0.106	+			317	AAPSAAREL	9	49	443.2426866843465	NaN	0	443.2427673339844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAPSAAREL_	ENSG00000107960|ENST00000224950|STN1	68.84614121027924	0.11159004992091766	1				NaN	NaN	0	NaN	3151	3527	6678
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6681	23.209	NaN	2530.6	30	0	954.4	0.106			+	-1	GAGVQVPVPVC	11	42	361.52660734331	1081.55799263013	3	361.5266418457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_GAGVQVPVPVC(Carbamidomethyl (C))_	REV__ENSG00000161914|ENST00000293771|ZNF653;REV__ENST00000590548.5_1_19:11597897-11616622:-|nuORF	26.063383197487333	0.7164075632144343	1				NaN	NaN	0	NaN	3152	3527	6678
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6682	23.211	NaN	1661.4	30	0	347.47	0.106	+			40233	STSFISSSK	9	48	472.23943450291546	942.4643160726309	2	472.2397766113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STSFISSSK_	ENSG00000159459|ENST00000290650|UBR1;nc|ENSG00000159459|Q8IWV7-2|UBR1;UBR1|p.P1614Hfs*32|1|0.22|ENSG00000159459|chr15:42952443-42952443|G/-|frameshift_variant	39.252832667884924	0.4290233611298554	1				NaN	NaN	0	NaN	3153	3527	6678
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6683	23.213	NaN	1371.9	30	0	233.54	0.106	+			45265	TVQHGAVY	8	45	437.7243300197325	NaN	0	437.72406005859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TVQHGAVY_	ENSG00000143751|ENST00000272091|SDE2	37.15910966729921	1.7418937515398478	1				NaN	NaN	0	NaN	3154	3527	6678
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6684	23.214	NaN	1151.9	30	0	147.89	0.034	+			49359	VVSSTVTQL	9	45	467.2658401469001	932.5171273606002	2	467.2662048339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VVSSTVTQL_	ENSG00000132470|ENST00000200181|ITGB4;ITGB4|p.A1304Pfs*140|1|0.27|ENSG00000132470|chr17:75752287-75752287|G/-|frameshift_variant;ITGB4|p.T1720Rfs*13|1|0.05|ENSG00000132470|chr17:75757046-75757052|GACCACT/-|frameshift_variant;nc|ENSG00000132470|P16144-2|ITGB4;nc|ENSG00000132470|P16144-3|ITGB4;nc|ENSG00000132470|P16144-4|ITGB4	32.81241826257853	0.4965981579233955	1				NaN	NaN	0	NaN	3155	3527	6678
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6685	23.215	NaN	1992.6	30	0	420.24	0.139	+			7110	DAAAAAAALGL	11	50	457.7505648663183	913.4865767994366	2	457.7509460449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DAAAAAAALGL_	ENSG00000127528|ENST00000248071|KLF2	44.116797842482775	0.5016126852448448	1				NaN	NaN	0	NaN	3156	3527	6678
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6696	23.242	NaN	18094	30	0	3169	0.214	+			39135	SSVGSVITK	9	70	439.2528033381804	876.4910537431608	2	439.2528076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSVGSVITK_	ENSG00000076554|ENST00000518937|TPD52;ENST00000517445.5_1_8:80962678-80964851:-|nuORF;ENST00000521354.5_1_8:80950353-81083761:-|nuORF;ENST00000522364.5_1_8:80963727-80992703:-|nuORF;nc|ENSG00000076554|P55327-2|TPD52;nc|ENSG00000076554|P55327-3|TPD52;nc|ENSG00000076554|P55327-5|TPD52;nc|ENSG00000076554|P55327-6|TPD52;nc|ENSG00000076554|P55327-7|TPD52;nc|ENSG00000076554|P55327|TPD52;TPD52|p.K164Sfs*5|1|0.09|ENSG00000076554|chr8:80051542-80051542|T/-|frameshift_variant	131.61620852596164	0.014413238321579053	1				NaN	NaN	0	NaN	3164	3530	6695
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6697	23.246	NaN	11421	30	0	2329.9	0.106	+			14607	GTGDVKLLK	9	62	465.7842319905098	929.5539110478196	2	465.7843322753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTGDVKLLK_	ENSG00000099901|ENST00000430524|RANBP1;ENST00000435265.5_1_22:20106640-20110140:+|nuORF;ENST00000488484.1_1_22:20105172-20110015:+|nuORF;nc|ENSG00000099901|P43487-2|RANBP1;nc|ENSG00000099901|P43487|RANBP1	124.08010499294276	0.018729767491916592	1				NaN	NaN	0	NaN	3165	3530	6695
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6698	23.248	NaN	2672.7	30	0	993.87	0.106	+			29367	PAGGVGGP	8	36	306.1605978345475	610.306642735895	2	306.1607971191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PAGGVGGP_	ENSG00000108604|ENST00000448276|SMARCD2;SMARCD2|p.P489Lfs*19|1|0.36|ENSG00000108604|chr17:63833145-63833145|G/-|frameshift_variant;SMARCD2|p.P92Lfs*20|1|0.33|ENSG00000108604|chr17:63837567-63837567|G/-|frameshift_variant;SMARCD2|p.P96Hfs*16|1|0.36|ENSG00000108604|chr17:63837555-63837555|G/-|frameshift_variant	24.504012794735996	0.7701314986472447	1				NaN	NaN	0	NaN	3166	3530	6695
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6699	23.249	NaN	1681.3	30	0	207.44	0.106				-1	LPEAMKYY	8	47	515.7507478002586	1029.4869426673172	2	515.7515258789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_LPEAM(Oxidation (M))KYY_	tr|U7SHX2|U7SHX2_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02314PE=4SV=1	42.47446043378293	0.6409579893742323	1				NaN	NaN	0	NaN	3167	3530	6695
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6700	23.251	NaN	5254.7	30	0	3534.8	0.106			+	-1	FKTVMGFLMI	10	47	401.5487294503732	NaN	0	401.5486145019531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_FKTVMGFLM(Oxidation (M))I_	REV__ENSG00000143093|ENST00000369795|STRIP1;REV__ENST00000473429.5_1_1:110584363-110592127:+|nuORF;REV__ENST00000485775.5_1_1:110582506-110596531:+|nuORF;REV__nc|ENSG00000143093|Q5VSL9-2|STRIP1	28.081489160057373	0.40797012399963245	1				NaN	NaN	0	NaN	3168	3530	6695
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6701	23.253	NaN	1070.4	30	0	176.01	0.034	+			35657	SCWRKWKQLS	10	53	460.2411193847656	NaN	0	460.2411193847656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_SC(Carbamidomethyl (C))WRKWKQLS_	ENSG00000177239|ENST00000371589|MAN1B1;ENST00000545096.1_1_9:139981559-139982655:+|nuORF;MAN1B1|p.L339Sfs*2|3|0.33|ENSG00000177239|chr9:137101096-137101096|G/-|frameshift_variant	43.650786325866115	0.3457431322078509	1				NaN	NaN	0	NaN	3169	3530	6695
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6702	23.254	NaN	1539.1	30	0	167.72	0.141			+	-1	LIMIMMMR	8	56	535.7655712461135	1069.516589559027	2	535.7650756835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Oxidation (M)	_LIMIMM(Oxidation (M))M(Oxidation (M))R_	REV__nc|ENSG00000169490|Q9BX73-2|TM2D2	39.021493756699265	0.6623843612266921	1				NaN	NaN	0	NaN	3170	3530	6695
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6713	23.279	NaN	4441.7	30	0	554.14	0.215			+	32250	QTKVRYVL	8	73	503.80554072559164	NaN	0	503.80523681640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QTKVRYVL_	REV__nc|ENSG00000262980|Q8NGH6|OR52L2P	57.81127852772723	1.7418937515398478	1				NaN	NaN	0	NaN	3178	3533	6712
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6714	23.283	NaN	3265.3	30	0	604.33	0.106			+	46020	VAVQAHPDL	9	66	475.2583382853028	NaN	0	475.25823974609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VAVQAHPDL_	REV__AGL|p.K1407Nfs*8|1|0.39|ENSG00000162688|chr1:99915441-99915441|A/-|frameshift_variant;REV__AGL|p.N1304Ifs*10|1|0.38|ENSG00000162688|chr1:99912472-99912472|A/-|frameshift_variant;REV__AGL|p.N1304Kfs*7|1|0.38|ENSG00000162688|chr1:99912471-99912472|-/A|frameshift_variant;REV__ENSG00000162688|ENST00000361915|AGL;REV__nc|ENSG00000162688|P35573-2|AGL;REV__nc|ENSG00000162688|P35573-3|AGL	60.97194046774394	0.14517358171632622	1				NaN	NaN	0	NaN	3179	3533	6712
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6715	23.285	NaN	6515.9	30	0	543.69	0.106	+			45009	TVEVAKKL	8	66	444.28142147331755	886.5482900134351	2	444.2811584472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVEVAKKL_	tr|U7T6P2|U7T6P2_FUSNUHelix-turn-helixdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00314PE=4SV=1	56.72105179125745	0.5342425954139568	1				NaN	NaN	0	NaN	3180	3533	6712
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6716	23.286	NaN	2339	30	0	442.25	0.106			+	32149	QSPKTKKQP	9	49	521.3060403590644	1040.5975277849286	2	521.306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QSPKTKKQP_	REV__EME1|p.K470Rfs*11|1|0.39|ENSG00000154920|chr17:50380373-50380373|A/-|frameshift_variant;REV__ENSG00000154920|ENST00000338165|EME1;REV__nc|ENSG00000154920|Q96AY2-2|EME1	58.78195531508484	0.22376836668196862	1				NaN	NaN	0	NaN	3181	3533	6712
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6717	23.288	NaN	3270.7	30	0	1803.3	0.106	+			32292	QTNPTYLAK	9	47	518.2767885554398	1034.5390241776795	2	518.2774047851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QTNPTYLAK_	ENSG00000140575|ENST00000268182|IQGAP1;IQGAP1|p.S1529Afs*10|1|0.15|ENSG00000140575|chr15:90492665-90492665|A/-|frameshift_variant	51.19269402634007	0.2889735674168909	1				NaN	NaN	0	NaN	3182	3533	6712
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6718	23.29	NaN	3735.2	30	0	1419.5	0.037	+			41381	SVMKSFIKR	9	58	365.883073545897	1094.627391237891	3	365.8833312988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVMKSFIKR_	ENSG00000149503|ENST00000394818|INCENP;ENST00000528375.1_1_11:61905314-61909007:+|nuORF;nc|ENSG00000149503|Q9NQS7-2|INCENP	51.19269402634007	0.2889735674168909	1				NaN	NaN	0	NaN	3183	3533	6712
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6719	23.291	NaN	684.11	30	0	139.77	0.14	+			50289	WSFCKLKT	8	34	506.768781890849	NaN	0	506.7690734863281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_WSFCKLKT_	ENST00000366647.8_1_1:231403469-231403520:+|nuORF	25.450171626174864	1.7418937515398478	1				NaN	NaN	0	NaN	3184	3533	6712
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6731	23.318	NaN	8538.3	30	0	1516.2	0.214			+	-1	LSCPFSFLPVL	11	53	427.22994004373584	1278.6679907314076	3	427.2298583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_LSC(Carbamidomethyl (C))PFSFLPVL_	REV__ENSG00000218819|ENST00000405799|TDRD15	32.75053402867276	0.6462648045997152	1				NaN	NaN	0	NaN	3193	3536	6730
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6732	23.321	NaN	3293.1	30	0	450.57	0.106			+	8412	EAQGLKGAL	9	58	443.752961647297	885.491370361394	2	443.75286865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EAQGLKGAL_	REV__ENST00000587250.3_1_17:41180731-41180929:+|nuORF	47.657333605630114	0.33044192980041115	1				NaN	NaN	0	NaN	3194	3536	6730
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6733	23.323	NaN	1350.1	30	0	182.37	0.106	+			21251	KLLAAMLSQ	9	51	495.78625936342684	989.5579657936537	2	495.7861633300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_KLLAAM(Oxidation (M))LSQ_	ENSG00000165084|ENST00000518698|C8orf34;ENST00000521406.5_1_8:69442879-69730478:+|nuORF;nc|nan|Q49A92-2|C8orf34;nc|nan|Q49A92-3|C8orf34	75.04331003522576	0.118981335847003	1				NaN	NaN	0	NaN	3195	3536	6730
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6734	23.325	NaN	2504.5	30	0	1169.7	0.106	+			38276	SQPSKGGLLE	10	55	508.2747371232027	1014.5349213132055	2	508.2745056152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SQPSKGGLLE_	ENSG00000141971|ENST00000317040|MVB12A;nc|ENSG00000141971|Q96EY5-3|MVB12A	24.519189625965996	0.6795976720565101	1				NaN	NaN	0	NaN	3196	3536	6730
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6735	23.327	NaN	2287.5	30	0	485.75	0.106	+			23196	KYADLSHNRL	10	45	406.22019924536096	1215.638768336283	3	406.2187194824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KYADLSHNRL_	ENSG00000113643|ENST00000231572|RARS1;nc|ENSG00000113643|P54136-2|RARS1	30.568863376406313	0.6301935916953115	1				NaN	NaN	0	NaN	3197	3536	6730
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6736	23.329	NaN	938.49	30	0	64.691	0.106			+	22536	KTRGLGDF	8	40	447.2454900230436	892.4764271128872	2	447.2452392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KTRGLGDF_	REV__ENSG00000100347|ENST00000350028|SAMM50	53.351449002276354	0.5676011784961348	1				NaN	NaN	0	NaN	3198	3536	6730
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6737	23.33	NaN	339.26	30	0	29.108	0.038				-1	HISMGTFAVMS	11	26	598.7752537654429	1195.5359545976858	2	598.7759399414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_HISM(Oxidation (M))GTFAVMS_	SLC26A6|p.V144M|1|0.17|ENSG00000225697|chr3:48632977-48632977|C/T|missense_variant	14.137123925751023	0.8042936413770803	1				NaN	NaN	0	NaN	3199	3536	6730
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6749	23.356	NaN	13014	30	0	1007.6	0.214	+			40757	SVDKLVIQK	9	78	515.3184391501148	1028.6223253670296	2	515.3193969726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVDKLVIQK_	ENST00000523612.1_1_8:142469282-142469963:+|nuORF	126.24258497203832	0.01742065577488747	1				NaN	NaN	0	NaN	3208	3539	6748
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6750	23.36	NaN	3307	30	0	1475.3	0.106	+			8361	EALKSHIM	8	49	464.7494156658918	927.4842783985836	2	464.74969482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EALKSHIM_	ENSG00000150753|ENST00000280326|CCT5;ENST00000508451.1_1_5:10250422-10254994:+|nuORF;ENST00000510326.5_1_5:10250452-10254343:+|nuORF	82.30502934623384	0.30436709589983096	1				NaN	NaN	0	NaN	3209	3539	6748
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6751	23.362	NaN	2154.9	30	0	1043.4	0.106			+	32789	RASRVSIKS	9	48	502.3025404197621	NaN	0	502.302734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RASRVSIKS_	REV__ENSG00000167306|ENST00000285039|MYO5B	28.081489160057373	0.33578952234132536	1				NaN	NaN	0	NaN	3210	3539	6748
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6752	23.363	NaN	1992.9	30	0	561.3	0.106				-1	 	0	50	413.2446869940389	824.4748210548778	2	413.2451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	3211	3539	6748
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6753	23.365	NaN	1115	30	0	132.24	0.106				-1	KCLINVSF	8	49	490.7670137782789	NaN	0	490.767578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_KC(Carbamidomethyl (C))LINVSF_	nc|ENSG00000280055|Q8N9X5|LINC02912	31.954861631926434	1.7418937515398478	1				NaN	NaN	0	NaN	3212	3539	6748
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6754	23.367	NaN	1533.6	30	0	620.89	0.034	+			33714	RPGEQTGPV	9	49	470.74542535193257	939.4762977706652	2	470.7465515136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RPGEQTGPV_	ENST00000535977.5_1_16:677627-678308:+|nuORF	27.882242232435846	0.5426732730940306	1				NaN	NaN	0	NaN	3213	3539	6748
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6766	23.393	NaN	3396.3	30	0	560.79	0.214	+			16392	HENRTLSI	8	63	485.2591911893029	968.5038294454058	2	485.2591552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HENRTLSI_	ENSG00000101825|ENST00000217939|MXRA5;MXRA5|p.Q2683Kfs*44|1|0.34|ENSG00000101825|chrX:3310156-3310156|G/-|frameshift_variant	56.72105179125745	0.5342425954139568	1				NaN	NaN	0	NaN	3222	3542	6765
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6767	23.396	NaN	3535.4	30	0	1226.4	0.106	+			46797	VHQLTLEVI	9	42	351.20929541232687	1050.6060568371806	3	351.2092590332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VHQLTLEVI_	ENST00000463753.5_1_3:99357381-99394559:+|nuORF	37.15910966729921	0.4535818937225704	1				NaN	NaN	0	NaN	3223	3542	6765
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6768	23.398	NaN	1285.2	30	0	238.47	0.106	+			47451	VPVGEKTTY	9	51	497.2663337332716	NaN	0	497.2662048339844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VPVGEKTTY_	ENSG00000163975|ENST00000296350|MELTF;ENST00000469783.1_1_3:196715998-196731024:-|nuORF	32.81241826257853	0.3119040447479903	1				NaN	NaN	0	NaN	3224	3542	6765
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6769	23.4	NaN	2155.3	30	0	704.91	0.106				-1	KYCLTLMQN	9	58	565.2733381700027	1128.5321234068053	2	565.2752075195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_KYCLTLM(Oxidation (M))QN_	ENSG00000198954|ENST00000361983|KIFBP	79.45101966838831	0.09992237243120712	1				NaN	NaN	0	NaN	3225	3542	6765
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6770	23.402	NaN	894.81	30	0	138.56	0.036				-1	KSPQCAARF	9	50	532.7692073685887	NaN	0	532.7691650390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_KSPQC(Carbamidomethyl (C))AARF_	ENST00000374232.7_1_9:115632278-115632389:+|nuORF	51.33545320467046	0.19748963086191895	1				NaN	NaN	0	NaN	3226	3542	6765
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6780	23.425	NaN	5311.2	30	0	672.99	0.214	+			17291	IADADATVK	9	57	452.24267067257546	902.4707884119509	2	453.24713134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IADADATVK_	ENSG00000196569|ENST00000421865|LAMA2;LAMA2|p.A2665Cfs*4|1|0.15|ENSG00000196569|chr6:129491988-129491989|-/G|frameshift_variant;LAMA2|p.A2876Pfs*27|1|0.18|ENSG00000196569|chr6:129505272-129505272|A/-|frameshift_variant;LAMA2|p.A2876Sfs*30|1|0.32|ENSG00000196569|chr6:129505271-129505272|-/A|frameshift_variant;LAMA2|p.M2985Wfs*8|1|0.15|ENSG00000196569|chr6:129512453-129512453|A/-|frameshift_variant;LAMA2|p.V2281Cfs*12|1|0.36|ENSG00000196569|chr6:129456464-129456465|-/T|frameshift_variant	37.15910966729921	0.4535818937225704	1				NaN	NaN	0	NaN	3233	3545	6779
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6781	23.429	NaN	2332.7	30	0	347.84	0.106			+	23628	LAQELQAV	8	50	436.247544170265	870.48053540733	2	436.2476501464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LAQELQAV_	REV__ENSG00000131018|ENST00000367255|SYNE1;REV__ENST00000461872.6_1_6:152697909-152949466:-|nuORF;REV__ENST00000471834.1_1_6:152690575-152702320:-|nuORF;REV__nc|ENSG00000131018|Q8NF91-10|SYNE1;REV__nc|ENSG00000131018|Q8NF91-12|SYNE1;REV__nc|ENSG00000131018|Q8NF91-4|SYNE1;REV__nc|ENSG00000131018|Q8NF91-7|SYNE1;REV__SYNE1|p.A3854Lfs*20|1|0.4|ENSG00000131018|chr6:152352048-152352048|T/-|frameshift_variant;REV__SYNE1|p.E4738Kfs*25|1|0.12|ENSG00000131018|chr6:152330474-152330474|T/-|frameshift_variant;REV__SYNE1|p.E5862Gfs*83|1|0.12|ENSG00000131018|chr6:152300729-152300738|CCAGACTCCT/-|frameshift_variant;REV__SYNE1|p.G6773Wfs*7|1|0.44|ENSG00000131018|chr6:152236186-152236187|-/A|frameshift_variant;REV__SYNE1|p.K3606Sfs*5|1|0.25|ENSG00000131018|chr6:152354768-152354768|T/-|frameshift_variant;REV__SYNE1|p.K6871Rfs*22|2|0.52|ENSG00000131018|chr6:152233881-152233881|T/-|frameshift_variant;REV__SYNE1|p.L8283Pfs*8|1|0.19|ENSG00000131018|chr6:152148173-152148174|-/G|frameshift_variant;REV__SYNE1|p.M5602Nfs*13|2|0.32|ENSG00000131018|chr6:152310779-152310780|-/T|frameshift_variant;REV__SYNE1|p.V8635Sfs*12|1|0.15|ENSG00000131018|chr6:152133375-152133375|T/-|frameshift_variant	87.75429964447693	0.2842685068779738	1				NaN	NaN	0	NaN	3234	3545	6779
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6782	23.431	NaN	3825.2	30	0	1730.2	0.106			+	8692	EEAKAEKKR	9	64	544.8084169526102	NaN	0	544.8076782226562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EEAKAEKKR_	REV__ENSG00000122970|ENST00000242591|IFT81;REV__IFT81|p.L493Tfs*7|1|0.42|ENSG00000122970|chr12:110192619-110192620|-/A|frameshift_variant;REV__nc|ENSG00000122970|Q8WYA0-3|IFT81	40.05817265558897	0.275207446262312	1				NaN	NaN	0	NaN	3235	3545	6779
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6783	23.432	NaN	3721.2	30	0	560.93	0.106	+			16468	HETGTKITI	9	60	500.27690707185326	998.5392612105065	2	500.27728271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HETGTKITI_	ENSG00000073792|ENST00000382199|IGF2BP2;ENST00000496495.1_1_3:185393074-185393625:-|nuORF;ENST00000550858.1_1_12:42681476-42682067:+|nuORF;nc|ENSG00000073792|Q9Y6M1-1|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-3|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-4|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-5|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-6|IGF2BP2	120.8684288430529	0.02067403653475984	1				NaN	NaN	0	NaN	3236	3545	6779
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6784	23.434	NaN	2439.8	30	0	707.45	0.106			+	-1	IFEMVVVFVA	10	42	390.5483403897699	1168.6231917695097	3	390.5484619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_IFEM(Oxidation (M))VVVFVA_	REV__GRIK5|p.A822V|1|0.08|ENSG00000105737|chr19:42003381-42003381|G/A|missense_variant	23.52269567125451	0.6877354443478558	1				NaN	NaN	0	NaN	3237	3545	6779
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6785	23.436	NaN	2696.4	30	0	181.92	0.106	+			38004	SPLKTTSSY	9	60	492.2558922758401	982.4972316184802	2	492.2552185058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SPLKTTSSY_	ENSG00000124429|ENST00000262753|POF1B;nc|ENSG00000124429|Q8WVV4-1|POF1B;nc|ENSG00000124429|Q8WVV4-3|POF1B;POF1B|p.T130Lfs*12|1|0.14|ENSG00000124429|chrX:85359600-85359601|-/AG|frameshift_variant	145.15565482312357	0.00806134135205793	1				NaN	NaN	0	NaN	3238	3545	6779
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6786	23.438	NaN	14940	30	0	4203.2	0.035	+			32494	QVQAAQFAK	9	66	495.77182323798985	989.5290935427797	2	495.7712707519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QVQAAQFAK_	ENSG00000135441|ENST00000548925|BLOC1S1;nc|ENSG00000135441|P78537-2|BLOC1S1	111.64827973302667	0.027316110422332632	1				NaN	NaN	0	NaN	3239	3545	6779
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6797	23.463	NaN	3732.2	30	0	1268.4	0.214	+			48535	VTNTIVALMQ	10	61	545.3008795249632	1088.5872061167263	2	545.3005981445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTNTIVALMQ_	ENSG00000131183|ENST00000324417|SLC34A1;nc|ENSG00000131183|Q06495-2|SLC34A1;SLC34A1|p.A207V|1|0.32|ENSG00000131183|chr5:177387849-177387849|C/T|missense_variant;SLC34A1|p.F397Sfs*16|1|0.31|ENSG00000131183|chr5:177396742-177396742|C/-|frameshift_variant	62.107414245175825	0.3466735403679669	1				NaN	NaN	0	NaN	3247	3548	6796
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6798	23.467	NaN	8475.3	30	0	5465	0.106			+	13020	GEVLASALSA	10	45	459.2503220201617	916.4860911071235	2	459.25048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEVLASALSA_	REV__ENSG00000168497|ENST00000304141|CAVIN2	49.44154591367651	0.46214596422418036	1				NaN	NaN	0	NaN	3248	3548	6796
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6799	23.469	NaN	11699	30	0	4071.4	0.106	+			18027	IINSSITTK	9	65	488.7871381788376	975.5597234244752	2	488.7869567871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IINSSITTK_	CCT3|p.A379Lfs*9|1|0.21|ENSG00000163468|chr1:156312061-156312061|C/-|frameshift_variant;CCT3|p.K197Nfs*23|1|0.17|ENSG00000163468|chr1:156320857-156320857|T/-|frameshift_variant;CCT3|p.L350Ffs*9|1|0.49|ENSG00000163468|chr1:156312146-156312147|-/A|frameshift_variant;ENSG00000163468|ENST00000295688|CCT3;nc|ENSG00000163468|P49368-2|CCT3	89.02883481214508	0.06760336634167786	1				NaN	NaN	0	NaN	3249	3548	6796
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6800	23.47	NaN	992.55	30	0	246.5	0.106	+			2396	ANTLGYSD	8	39	420.6904136301033	NaN	0	420.6904602050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ANTLGYSD_	ENSG00000169432|ENST00000642356|SCN9A;nc|ENSG00000169432|Q15858-2|SCN9A;nc|ENSG00000169432|Q15858-3|SCN9A;nc|ENSG00000169432|Q15858-4|SCN9A;SCN9A|p.T1946Nfs*14|1|0.31|ENSG00000169432|chr2:166198802-166198803|-/T|frameshift_variant;SCN9A|p.V1720Sfs*8|1|0.13|ENSG00000169432|chr2:166199481-166199482|-/T|frameshift_variant	27.882242232435846	1.7418937515398478	1				NaN	NaN	0	NaN	3250	3548	6796
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6801	23.472	NaN	1405	30	0	188.86	0.035			+	48461	VTLLPFGRN	9	47	508.7986997090223	1015.5828464848446	2	509.3010559082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTLLPFGRN_	REV__ENSG00000165731|ENST00000355710|RET;REV__nc|ENSG00000165731|P07949-2|RET	47.91560031466742	0.327412564698279	1				NaN	NaN	0	NaN	3251	3548	6796
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6810	23.492	NaN	4271.8	30	0	720.78	0.214	+			33684	RPAGLPEKY	9	63	515.78728718862	1029.5600214440399	2	515.7881469726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RPAGLPEKY_	ENSG00000134339|ENST00000256733|SAA2;ENSG00000173432|ENST00000356524|SAA1	56.43379154798735	0.2433427591689151	1				NaN	NaN	0	NaN	3257	3551	6809
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6811	23.496	NaN	1223.4	30	0	403.28	0.106				-1	TLPPTTAMAVL	11	24	377.5436424736324	1129.6090980210972	3	377.54339599609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_TLPPTTAM(Oxidation (M))AVL_	ENSG00000164941|ENST00000523731|INTS8;ENST00000523321.5_1_8:95835614-95871872:+|nuORF;INTS8|p.F279Lfs*6|1|0.34|ENSG00000164941|chr8:94836602-94836602|T/-|frameshift_variant;nc|ENSG00000164941|Q75QN2-2|INTS8	25.125986553469783	0.7262400895305658	1				NaN	NaN	0	NaN	3258	3551	6809
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6812	23.498	NaN	1120.4	30	0	207.46	0.035			+	-1	CNVETSLKA	9	47	511.2525818475269	NaN	0	511.2519836425781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_C(Carbamidomethyl (C))NVETSLKA_	REV__ENSG00000253117|ENST00000254627|OC90;REV__nc|ENSG00000253117|Q02509-3|OC90	37.81151784470057	0.28666463014928195	1				NaN	NaN	0	NaN	3259	3551	6809
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6821	23.519	NaN	11603	30	0	2934.2	0.141	+			39387	STDLLGLQG	9	63	452.24267067257546	902.4707884119509	2	452.2425842285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STDLLGLQG_	ENSG00000063169|ENST00000594866|BICRA	108.08749611321984	0.03094949498378333	1				NaN	NaN	0	NaN	3265	3554	6820
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6827	23.537	NaN	2514.5	30	0	567.43	0.214			+	2289	ALYYQKNPN	9	58	555.7820685846133	1109.5495842360265	2	555.7826538085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ALYYQKNPN_	REV__ENSG00000032389|ENST00000382125|EIPR1;REV__ENST00000496433.5_1_2:3193107-3197993:-|nuORF	47.657333605630114	0.33044192980041115	1				NaN	NaN	0	NaN	3268	3557	6826
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6828	23.541	NaN	643.24	30	0	77.007	0.036	+			38070	SPSPNYQKY	9	39	542.25817122363	1082.50178951406	2	542.2595825195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SPSPNYQKY_	ENSG00000150907|ENST00000379561|FOXO1	20.94693142431847	0.6074874384046576	1				NaN	NaN	0	NaN	3269	3557	6826
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6836	23.559	NaN	3966.1	30	0	1186.9	0.214	+			25936	LSHIEPHLT	9	64	523.7848028395013	1045.5550527458024	2	523.7852783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSHIEPHLT_	ENSG00000253309|ENST00000681248|SERPINE3;nc|ENSG00000253309|A8MV23|SERPINE3	55.50420428727701	0.2510918378945873	1				NaN	NaN	0	NaN	3274	3560	6835
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6837	23.563	NaN	1222.2	30	0	239.14	0.038	+			1783	AIDNQIFKQD	10	58	596.3062133789062	NaN	0	596.3062133789062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AIDNQIFKQD_	ENSG00000137812|ENST00000399668|KNL1;ENST00000533001.1_1_15:40886490-40917961:+|nuORF;nc|ENSG00000137812|Q8NG31-3|KNL1;nc|ENSG00000137812|Q8NG31-4|KNL1;nc|ENSG00000137812|Q8NG31|KNL1	31.634271133179894	0.39630454568332174	1				NaN	NaN	0	NaN	3275	3560	6835
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6844	23.581	NaN	4906.9	30	0	874.08	0.214	+			13786	GQHTVLLVK	9	65	497.80552917619957	993.5965054191992	2	497.8057556152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GQHTVLLVK_	ENSG00000180198|ENST00000683442|RCC1;nc|ENSG00000180198|P18754-2|RCC1	94.4091291819064	0.0524345700464502	1				NaN	NaN	0	NaN	3279	3563	6843
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6845	23.585	NaN	1939.2	30	0	222.75	0.106	+			39396	STDPAAPNLK	10	47	507.2664265662291	1012.5183001992582	2	507.2664794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STDPAAPNLK_	ENSG00000137076|ENST00000314888|TLN1;nc|ENSG00000137076|Q9Y490-2|TLN1;TLN1|p.P1628Rfs*20|1|0.44|ENSG00000137076|chr9:35707144-35707144|G/-|frameshift_variant	58.22992032128504	0.38193887838457763	1				NaN	NaN	0	NaN	3280	3563	6843
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6846	23.587	NaN	2496	30	0	608.66	0.106	+			2894	ASATALVSR	9	49	438.25115722272744	NaN	0	438.2503967285156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASATALVSR_	ENSG00000167491|ENST00000683918|GATAD2A;nc|ENSG00000167491|Q86YP4-2|GATAD2A;nc|ENSG00000167491|Q86YP4|GATAD2A	96.0336014099291	0.029433397039169355	1				NaN	NaN	0	NaN	3281	3563	6843
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6847	23.588	NaN	852.05	30	0	138.79	0.106	+			31714	QNSEHHGQ	8	41	468.69912141547786	935.3836898977557	2	468.69891357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QNSEHHGQ_	ENSG00000188033|ENST00000311437|ZNF490	24.20275056022122	0.7724576178584145	1				NaN	NaN	0	NaN	3282	3563	6843
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6848	23.59	NaN	1033.3	30	0	238.16	0.035	+			20486	KEYQKAIK	8	50	504.2978021665394	1006.5810513998788	2	504.2988586425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEYQKAIK_	tr|U7SVZ1|U7SVZ1_FUSNUHTHhxlR-typedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01394PE=4SV=1	52.936696900407355	0.5717071646657654	1				NaN	NaN	0	NaN	3283	3563	6843
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6858	23.614	NaN	4089.7	30	0	1035.9	0.215			+	26577	LTTLSHPG	8	54	413.2267897442415	824.439026555283	2	413.2266540527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LTTLSHPG_	REV__ENST00000555647.5_3_14:75388227-75389943:-|nuORF	46.76643321282427	0.6143254112625767	1				NaN	NaN	0	NaN	3290	3566	6857
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6859	23.617	NaN	1875.8	30	0	249.54	0.036				-1	LQFLLTCIQ	9	60	560.8087173827814	1119.6028818323628	2	560.8099975585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LQFLLTCIQ_	ENST00000513591.5_1_5:76396123-76414258:+|nuORF	53.08895987439943	0.27122541748218487	1				NaN	NaN	0	NaN	3291	3566	6857
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6871	23.643	NaN	6084.6	30	0	673.5	0.214	+			15923	HADGTIVRY	9	69	516.2673342283431	NaN	0	516.2672119140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HADGTIVRY_	ENSG00000138002|ENST00000260570|IFT172;ENST00000476264.6_1_2:27703990-27712589:-|nuORF;ENST00000507184.5_1_2:27680991-27709067:-|nuORF;ENST00000511842.5_1_2:27693746-27712529:-|nuORF;IFT172|p.G252Afs*6|1|0.19|ENSG00000138002|chr2:27481076-27481076|C/-|frameshift_variant;IFT172|p.W628Qfs*6|1|0.03|ENSG00000138002|chr2:27465466-27465467|-/CATTG|frameshift_variant;nc|ENSG00000138002|Q9UG01-2|IFT172;nc|ENSG00000138002|Q9UG01-3|IFT172	110.11987700582712	0.00958887139988123	1				NaN	NaN	0	NaN	3300	3569	6870
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6872	23.646	NaN	3783	30	0	497.17	0.106			+	26479	LTLLVEER	8	64	486.7898425552321	971.5651321772642	2	486.78900146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LTLLVEER_	REV__ENSG00000175535|ENST00000369221|PNLIP	47.91560031466742	0.6071945918984287	1				NaN	NaN	0	NaN	3301	3569	6870
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6873	23.648	NaN	1101.4	30	0	214.62	0.106	+			10414	EVGMYGKIAV	10	49	533.78594704966	NaN	0	533.7858276367188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EVGMYGKIAV_	ENSG00000167986|ENST00000301764|DDB1;ENST00000537120.5_1_11:61091345-61100440:-|nuORF;nc|ENSG00000167986|Q16531-2|DDB1	37.81151784470057	0.3760215235790741	1				NaN	NaN	0	NaN	3302	3569	6870
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6874	23.65	NaN	596.92	30	0	74.728	0.034	+			28443	NEVVQVHAA	9	37	483.75274651630633	NaN	0	483.7520751953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NEVVQVHAA_	ENSG00000171940|ENST00000371471|ZNF217;ZNF217|p.A693Lfs*10|1|0.48|ENSG00000171940|chr20:53576687-53576687|C/-|frameshift_variant;ZNF217|p.F480Sfs*35|1|0.41|ENSG00000171940|chr20:53578378-53578378|A/-|frameshift_variant;ZNF217|p.T198K|1|0.19|ENSG00000171940|chr20:53582234-53582234|G/T|missense_variant	54.776311868738084	0.17377682019723872	1				NaN	NaN	0	NaN	3303	3569	6870
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6885	23.675	NaN	1523	30	0	272.07	0.214			+	47537	VQTIKSRPA	9	53	500.30082817040415	998.5871034076083	2	500.3011169433594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VQTIKSRPA_	REV__ENST00000356322.10_1_19:52529168-52531547:-|nuORF	37.15910966729921	0.4535818937225704	1				NaN	NaN	0	NaN	3311	3572	6884
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6886	23.679	NaN	2227.4	30	0	263.27	0.106			+	43312	TGAEKQLK	8	50	437.7532541587297	NaN	0	437.75341796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TGAEKQLK_	REV__ENSG00000160710|ENST00000368474|ADAR;REV__ENST00000463920.5_1_1:154573515-154574721:-|nuORF;REV__nc|ENSG00000160710|P55265-2|ADAR;REV__nc|ENSG00000160710|P55265-3|ADAR;REV__nc|ENSG00000160710|P55265-4|ADAR	87.69643885390035	1.7418937515398478	1				NaN	NaN	0	NaN	3312	3572	6884
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6887	23.681	NaN	2059.6	30	0	627.19	0.106			+	9872	EQGRVRGR	8	54	479.27143054756726	956.5283081619345	2	479.2713623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EQGRVRGR_	REV__EDEM3|p.F658Lfs*4|1|0.35|ENSG00000116406|chr1:184708216-184708216|A/-|frameshift_variant;REV__EDEM3|p.K381Nfs*22|2|0.29|ENSG00000116406|chr1:184719180-184719180|T/-|frameshift_variant;REV__ENSG00000116406|ENST00000318130|EDEM3;REV__ENST00000474725.5_1_1:184690416-184706818:-|nuORF;REV__nc|ENSG00000116406|Q9BZQ6-2|EDEM3;REV__nc|ENSG00000143569|Q14157-4|UBAP2L	37.15910966729921	0.6739408393984688	1				NaN	NaN	0	NaN	3313	3572	6884
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6888	23.683	NaN	884.75	30	0	65.314	0.106				-1	ISLSSSKCH	9	61	509.75075875521304	1017.4869645772261	2	509.7518615722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_ISLSSSKC(Carbamidomethyl (C))H_	BRCA2|p.E3316Rfs*11|1|0.3|ENSG00000139618|chr13:32398452-32398453|-/A|frameshift_variant;BRCA2|p.K1691Nfs*15|1|0.11|ENSG00000139618|chr13:32339422-32339422|A/-|frameshift_variant;BRCA2|p.N1544Tfs*24|1|0.22|ENSG00000139618|chr13:32338982-32338982|A/-|frameshift_variant;BRCA2|p.N1642Mfs*2|1|0.08|ENSG00000139618|chr13:32339277-32339277|A/-|frameshift_variant;BRCA2|p.N1784Tfs*7|1|0.4|ENSG00000139618|chr13:32339700-32339700|A/-|frameshift_variant;BRCA2|p.T2515Nfs*24|1|0.35|ENSG00000139618|chr13:32356530-32356531|-/A|frameshift_variant;BRCA2|p.T2685Hfs*9|1|0.05|ENSG00000139618|chr13:32363251-32363251|A/-|frameshift_variant;ENSG00000139618|ENST00000380152|BRCA2	39.252832667884924	0.4290233611298554	1				NaN	NaN	0	NaN	3314	3572	6884
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6889	23.685	NaN	3405.7	30	0	878.16	0.106	+			1333	AETKGVAL	8	48	394.7291471288625	787.443741324525	2	395.2304992675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AETKGVAL_	ENSG00000126522|ENST00000304874|ASL;nc|ENSG00000126522|P04424-2|ASL;nc|ENSG00000126522|P04424-3|ASL	54.776311868738084	0.5534952410049249	1				NaN	NaN	0	NaN	3315	3572	6884
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6890	23.686	NaN	2361.6	30	0	515.96	0.032	+			24128	LEKTGVAV	8	42	408.74505634860884	815.4755597640177	2	408.7452697753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LEKTGVAV_	ENSG00000196924|ENST00000369850|FLNA;FLNA|p.A1026Lfs*20|1|0.42|ENSG00000196924|chrX:154361439-154361439|C/-|frameshift_variant;FLNA|p.G2237Efs*109|1|0.28|ENSG00000196924|chrX:154352240-154352240|C/-|frameshift_variant;FLNA|p.Q1716Sfs*23|2|0.38|ENSG00000196924|chrX:154354896-154354896|G/-|frameshift_variant;FLNA|p.R2520Vfs*16|1|0.7|ENSG00000196924|chrX:154349560-154349560|G/-|frameshift_variant;nc|ENSG00000196924|P21333-2|FLNA	42.396135135203025	0.6414440140393314	1				NaN	NaN	0	NaN	3316	3572	6884
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6901	23.712	NaN	11329	30	0	7848.2	0.214	+			15525	GVDDKFYSK	9	36	353.5098636222722	1057.5077614670165	3	353.5099792480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVDDKFYSK_	ENSG00000105254|ENST00000221855|TBCB;ENST00000392178.8_1_19:36606435-36612715:+|nuORF;ENST00000481742.1_1_19:36606435-36607215:+|nuORF;ENST00000589308.1_1_19:36606815-36612715:+|nuORF;nc|ENSG00000105254|Q99426-2|TBCB	25.57405402267927	0.5642445186134241	1				NaN	NaN	0	NaN	3324	3575	6900
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6902	23.715	NaN	2815.8	30	0	475.84	0.106	+			16678	HINGNTQF	8	56	465.7254481212101	929.4363433092202	2	465.7250061035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HINGNTQF_	L1MD2_dup2312|chr3:169838249-169838855:-|1.025247598227015|0.1719973841498203|2.58|473.0|28|1|anti-sense	60.97194046774394	0.49215940876911696	1				NaN	NaN	0	NaN	3325	3575	6900
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6903	23.717	NaN	1194	30	0	548.12	0.106				-1	CTRHRISY	8	37	546.7711812685045	1091.527809603809	2	546.7723999023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_C(Carbamidomethyl (C))TRHRISY_	ENSG00000157890|ENST00000395614|MEGF11;MEGF11|p.G421Afs*41|1|0.41|ENSG00000157890|chr15:65957572-65957572|C/-|frameshift_variant;MEGF11|p.G599Wfs*42|1|0.13|ENSG00000157890|chr15:65922851-65922852|-/G|frameshift_variant;nc|ENSG00000157890|A6BM72-3|MEGF11;nc|ENSG00000157890|A6BM72|MEGF11	12.959181472943097	0.7887000251064199	1				NaN	NaN	0	NaN	3326	3575	6900
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6904	23.719	NaN	1858.4	30	0	485.81	0.037	+			50540	YARSVHEEF	9	51	569.2700434515017	1136.5255339698033	2	569.2708129882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YARSVHEEF_	ENSG00000078808|ENST00000360001|SDF4;ENST00000465727.5_1_1:1152894-1153089:-|nuORF;ENST00000478938.1_1_1:1152894-1154464:-|nuORF;ENST00000494748.1_1_1:1152894-1154464:-|nuORF;nc|ENSG00000078808|Q9BRK5-2|SDF4;nc|ENSG00000078808|Q9BRK5-5|SDF4;nc|ENSG00000078808|Q9BRK5|SDF4	93.5975768576971	0.05472259948179787	1				NaN	NaN	0	NaN	3327	3575	6900
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6910	23.734	NaN	11963	30	0	2142.1	0.214	+			29543	PELGFQPD	8	75	451.7165717288414	901.4185905244829	2	451.71661376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PELGFQPD_	ENST00000486536.6_1_22:20720872-20720941:-|nuORF	53.351449002276354	0.5676011784961348	1				NaN	NaN	0	NaN	3330	3578	6909
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6911	23.737	NaN	4072.5	30	0	350.29	0.106	+			31694	QNLLKKTK	8	71	486.8140302724012	971.6135076116025	2	486.8138732910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QNLLKKTK_	ENST00000438666.6_1_13:36886473-36886551:-|nuORF	63.30626980617807	0.4690498839812213	1				NaN	NaN	0	NaN	3331	3578	6909
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6912	23.739	NaN	3258.4	30	0	503.14	0.106	+			41189	SVLDKSLTK	9	52	495.79524953236	989.57594613152	2	495.7953796386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVLDKSLTK_	ENSG00000198265|ENST00000358691|HELZ;ENST00000578938.1_1_17:65172688-65184471:-|nuORF;HELZ|p.L1089Ffs*20|1|0.05|ENSG00000198265|chr17:67128771-67128772|-/GTTAATG|frameshift_variant;nc|ENSG00000198265|P42694-2|HELZ	60.11826168202944	0.21262886028301267	1				NaN	NaN	0	NaN	3332	3578	6909
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6913	23.741	NaN	3230.2	30	0	758.2	0.106	+			31217	QGSPQRTATTV	11	39	382.5360898262284	1144.5864400788853	3	382.536376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QGSPQRTATTV_	ENST00000573058.1_1_17:79225874-79226105:-|nuORF	19.996771675451527	0.7768568223548057	1				NaN	NaN	0	NaN	3333	3578	6909
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6914	23.743	NaN	2721.5	30	0	581.06	0.106				-1	IILLKGCC	8	59	488.76936410299106	975.5241752727821	2	488.76922607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C)	_IILLKGC(Carbamidomethyl (C))C(Carbamidomethyl (C))_	ENSG00000126351|ENST00000450525|THRA;ENSG00000151090|ENST00000646209|THRB;nc|ENSG00000126351|P10827-3|THRA;nc|ENSG00000126351|P10827-4|THRA;nc|ENSG00000126351|P10827|THRA;nc|ENSG00000151090|P10828-2|THRB	35.200714571348534	0.6875396545722289	1				NaN	NaN	0	NaN	3334	3578	6909
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6915	23.745	NaN	922.71	30	0	247.72	0.106				-1	PRPNPAIMR	9	25	356.52957881012117	NaN	0	356.5295104980469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_PRPNPAIM(Oxidation (M))R_	ENSG00000204301|ENST00000375023|NOTCH4;ENST00000491215.1_1_6:32163216-32164008:-|nuORF;nc|ENSG00000204301|Q99466-2|NOTCH4	19.996771675451527	0.3693019437812985	1				NaN	NaN	0	NaN	3335	3578	6909
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6916	23.746	NaN	2388.4	30	0	604.78	0.037	+			50541	YARSVHEEF	9	34	379.8492593334462	NaN	0	379.8492736816406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YARSVHEEF_	ENSG00000078808|ENST00000360001|SDF4;ENST00000465727.5_1_1:1152894-1153089:-|nuORF;ENST00000478938.1_1_1:1152894-1154464:-|nuORF;ENST00000494748.1_1_1:1152894-1154464:-|nuORF;nc|ENSG00000078808|Q9BRK5-2|SDF4;nc|ENSG00000078808|Q9BRK5-5|SDF4;nc|ENSG00000078808|Q9BRK5|SDF4	32.81241826257853	0.3119040447479903	1				NaN	NaN	0	NaN	3336	3578	6909
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6926	23.77	NaN	5717.2	30	0	859.6	0.214	+			4425	ATIEETYSK	9	64	521.258407618489	1040.5022623037778	2	521.2594604492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATIEETYSK_	ENSG00000130475|ENST00000596536|FCHO1;ENST00000601247.5_1_19:17858586-17877404:+|nuORF;FCHO1|p.A50V|1|0.36|ENSG00000130475|chr19:17764404-17764404|C/T|missense_variant;nc|ENSG00000130475|O14526-2|FCHO1	96.0336014099291	0.047854655524928534	1				NaN	NaN	0	NaN	3343	3581	6925
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6927	23.773	NaN	22128	30	0	7827.5	0.106				-1	 	0	69	454.24551800019015	1359.7147246007705	3	454.2453918457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	3344	3581	6925
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6928	23.775	NaN	1535.4	30	0	127.79	0.106			+	33581	RLLGLAGLAGG	11	64	499.31147494784165	996.6083969624833	2	499.3114318847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RLLGLAGLAGG_	REV__ENSG00000203772|ENST00000685335|SPRN	36.31764250033197	0.6083289427130232	1				NaN	NaN	0	NaN	3345	3581	6925
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6929	23.777	NaN	3102	30	0	683.33	0.038				-1	 	0	45	388.86779112958635	1163.581543988959	3	388.86865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	3346	3581	6925
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6936	23.794	NaN	2552.6	30	0	596.31	0.214	+			29102	NTNIPIGNK	9	59	485.76951297455923	969.5244730159185	2	485.76953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NTNIPIGNK_	ENSG00000115464|ENST00000398571|USP34;nc|ENSG00000115464|Q70CQ2-2|USP34;nc|ENSG00000115464|Q70CQ2-3|USP34;USP34|p.L2716Sfs*30|1|0.05|ENSG00000115464|chr2:61214596-61214597|-/AAGCTGA|frameshift_variant;USP34|p.L3228*|1|0.22|ENSG00000115464|chr2:61190564-61190564|A/-|frameshift_variant;USP34|p.N788Kfs*4|1|0.42|ENSG00000115464|chr2:61343951-61343952|-/T|frameshift_variant;USP34|p.N788Yfs*3|1|0.09|ENSG00000115464|chr2:61343952-61343953|TT/-|frameshift_variant	85.16082228582465	0.07850854922700509	1				NaN	NaN	0	NaN	3350	3584	6935
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6937	23.797	NaN	2085.1	30	0	494.51	0.106	+			44902	TTYVNGVLQ	9	55	497.76367401225866	993.5127950913173	2	497.76409912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTYVNGVLQ_	tr|U7ST62|U7ST62_FUSNUPhophatidylinositol-4-phosphate5-kinaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01303PE=4SV=1	45.97224482568171	0.3502073465782774	1				NaN	NaN	0	NaN	3351	3584	6935
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6938	23.799	NaN	1014.7	30	0	185.81	0.106			+	47426	VPSHPKGR	8	40	439.25329994049986	876.4920469477997	2	439.2528991699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VPSHPKGR_	REV__ENST00000370828.3_1_X:132445305-132458320:-|nuORF	31.954861631926434	0.7126016770032289	1				NaN	NaN	0	NaN	3352	3584	6935
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6939	23.801	NaN	1210.2	30	0	167.19	0.106	+			11739	FSGRGTVA	8	45	397.71133766905024	NaN	0	397.7114562988281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FSGRGTVA_	ENSG00000167600|ENST00000310054|CYP2S1;nc|ENSG00000167600|Q96SQ9-2|CYP2S1	45.9519527083369	1.7418937515398478	1				NaN	NaN	0	NaN	3353	3584	6935
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6940	23.803	NaN	1579.6	30	0	378.56	0.035			+	42577	TASSFLLLR	9	53	504.2978021665394	1006.5810513998788	2	504.2986755371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TASSFLLLR_	REV__ENSG00000183751|ENST00000568546|TBL3	35.61828744233558	0.47037581924408073	1				NaN	NaN	0	NaN	3354	3584	6935
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6945	23.817	NaN	1882.2	30	0	346.9	0.214	+			15583	GVHASASAI	9	36	406.71659756336777	811.4186421935356	2	406.71636962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVHASASAI_	ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;TRRAP|p.K3443Sfs*19|1|0.28|ENSG00000196367|chr7:99004246-99004246|A/-|frameshift_variant	50.0245360154114	0.3026755932229825	1				NaN	NaN	0	NaN	3356	3587	6944
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6946	23.821	NaN	2170.7	30	0	538.07	0.106	+			36088	SEKEKQIVL	9	57	537.3140527747858	1072.6135526163714	2	537.314697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEKEKQIVL_	ENSG00000167861|ENST00000425042|HID1;HID1|p.L141Wfs*62|1|0.54|ENSG00000167861|chr17:74963048-74963048|G/-|frameshift_variant;HID1|p.P773Lfs*8|1|0.17|ENSG00000167861|chr17:74951619-74951619|G/-|frameshift_variant;nc|ENSG00000167861|Q8IV36-2|HID1	77.53327743719008	0.1082147015697554	1				NaN	NaN	0	NaN	3357	3587	6944
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6947	23.823	NaN	1581.8	30	0	208.02	0.033	+			17057	HQSPVSSL	8	37	427.721841126134	853.429129319068	2	427.72198486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HQSPVSSL_	ARID5A-CNNM3|1|fusion;ENSG00000168763|ENST00000305510|CNNM3;ENST00000465224.5_1_2:97494197-97494470:+|nuORF;nc|ENSG00000168763|Q8NE01-2|CNNM3;nc|ENSG00000168763|Q8NE01-3|CNNM3	74.25504064058377	0.37144338840759816	1				NaN	NaN	0	NaN	3358	3587	6944
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6955	23.841	NaN	1153.2	30	0	106.71	0.214	+			12935	GESQVKDNTF	10	46	562.7643123034891	1123.514071673778	2	562.76513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GESQVKDNTF_	ENSG00000236699|ENST00000420470|ARHGEF38	50.033510581677724	0.4566913063131936	1				NaN	NaN	0	NaN	3363	3590	6954
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6956	23.844	NaN	955.6	30	0	139	0.035			+	23900	LDKKEPQQ	8	46	493.2694056366803	984.5242583401606	2	493.2685852050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LDKKEPQQ_	REV__ENSG00000128881|ENST00000267890|TTBK2;REV__nc|ENSG00000128881|Q6IQ55-2|TTBK2;REV__TTBK2|p.N876Kfs*2|2|0.34|ENSG00000128881|chr15:42752618-42752619|-/T|frameshift_variant;REV__TTBK2|p.P697H|1|0.19|ENSG00000128881|chr15:42753156-42753156|G/T|missense_variant	32.75053402867276	0.7064580963089864	1				NaN	NaN	0	NaN	3364	3590	6954
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6982	23.913	NaN	11426	30	0	3515.2	0.215	+			45215	TVNTSLVGK	9	66	459.76607675428806	917.5176005753762	2	459.76617431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVNTSLVGK_	CCDC66|p.A265Sfs*9|1|0.15|ENSG00000180376|chr3:56567024-56567025|-/A|frameshift_variant;CCDC66|p.T207Nfs*2|2|0.31|ENSG00000180376|chr3:56566661-56566662|-/A|frameshift_variant;CCDC66|p.V732*|1|0.25|ENSG00000180376|chr3:56617454-56617454|A/-|frameshift_variant;ENSG00000180376|ENST00000394672|CCDC66;ENST00000422788.5_1_3:56595403-56599181:+|nuORF;ENST00000469966.1_1_3:56592935-56598176:+|nuORF;ENST00000472582.5_1_3:56591255-56599181:+|nuORF;nc|ENSG00000180376|A2RUB6-2|CCDC66;nc|ENSG00000180376|A2RUB6-3|CCDC66;nc|ENSG00000180376|A2RUB6-4|CCDC66	77.53327743719008	0.1082147015697554	1				NaN	NaN	0	NaN	3381	3599	6981
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6983	23.916	NaN	9264	30	0	1255.6	0.106			+	11286	FKGAISPK	8	53	424.2551572250195	846.495761516839	2	424.2554016113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FKGAISPK_	REV__ENSG00000166948|ENST00000202625|TGM6;REV__nc|ENSG00000166948|O95932-2|TGM6	102.7733458925114	0.2491487235419157	1				NaN	NaN	0	NaN	3382	3599	6981
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6984	23.918	NaN	2400.3	30	0	755.56	0.106	+			7197	DAHVDSTTY	9	58	504.71685233573646	1007.419151738273	2	504.7172546386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DAHVDSTTY_	ENSG00000109320|ENST00000226574|NFKB1;nc|ENSG00000109320|P19838-3|NFKB1;nc|ENSG00000109320|P19838|NFKB1;NFKB1|p.I888Sfs*8|1|0.09|ENSG00000109320|chr4:102613497-102613497|A/-|frameshift_variant	76.84663266511073	0.11118375776443899	1				NaN	NaN	0	NaN	3383	3599	6981
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6985	23.92	NaN	11056	30	0	4213.4	0.106	+			36853	SIFKQPVTK	9	52	349.87790188310873	1046.6118762495262	3	349.8781433105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SIFKQPVTK_	ENSG00000071655|ENST00000434436|MBD3;ENSG00000134046|ENST00000256429|MBD2;ENST00000590830.5_1_19:1578341-1584901:-|nuORF;nc|ENSG00000071655|O95983-2|MBD3	42.86426827375447	0.38666266728046506	1				NaN	NaN	0	NaN	3384	3599	6981
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6986	23.922	NaN	1148	30	0	214.45	0.106			+	5517	AVAGHHRL	8	51	430.7454833984375	NaN	0	430.7454833984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVAGHHRL_	REV__ENST00000305963.2_1_X:135053232-135055898:-|nuORF	37.028477286268924	1.7418937515398478	1				NaN	NaN	0	NaN	3385	3599	6981
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6987	23.924	NaN	1801.1	30	0	650.4	0.106	+			48154	VSYRADGL	8	37	440.7293949666626	879.4442370001252	2	440.7294616699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VSYRADGL_	nc|ENSG00000038382|O75962-3|TRIO	30.503639358989545	0.7238069182250283	1				NaN	NaN	0	NaN	3386	3599	6981
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6988	23.925	NaN	1621.2	30	0	280.66	0.036				-1	RTETLIPEM	9	57	553.2817425901663	1104.5489322471326	2	553.282958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_RTETLIPEM(Oxidation (M))_	ENSG00000038427|ENST00000265077|VCAN;nc|ENSG00000038427|P13611-3|VCAN;nc|ENSG00000038427|P13611-5|VCAN;VCAN|p.E2431Rfs*10|1|0.16|ENSG00000038427|chr5:83540290-83540291|-/G|frameshift_variant	27.882242232435846	0.5426732730940306	1				NaN	NaN	0	NaN	3387	3599	6981
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6996	23.944	NaN	7672.8	30	0	1345.2	0.214	+			36854	SIFKQPVTK	9	68	524.3132690887606	1046.6119852443212	2	524.314208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIFKQPVTK_	ENSG00000071655|ENST00000434436|MBD3;ENSG00000134046|ENST00000256429|MBD2;ENST00000590830.5_1_19:1578341-1584901:-|nuORF;nc|ENSG00000071655|O95983-2|MBD3	186.41076107051632	0.0006524797715399015	1				NaN	NaN	0	NaN	3392	3602	6995
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6997	23.947	NaN	1669.9	30	0	226.68	0.106			+	31026	QETSPKKQL	9	64	529.7946568196385	NaN	0	529.7937622070312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QETSPKKQL_	REV__ENSG00000142920|ENST00000294517|AZIN2;REV__ENST00000471119.5_1_1:33546965-33585780:+|nuORF;REV__ENST00000478204.5_1_1:33557816-33585780:+|nuORF;REV__ENST00000481886.5_1_1:33546965-33585780:+|nuORF;REV__ENST00000484656.5_1_1:33549518-33583718:+|nuORF;REV__nc|ENSG00000142920|Q96A70-2|AZIN2	51.19269402634007	0.19847346126499396	1				NaN	NaN	0	NaN	3393	3602	6995
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6998	23.949	NaN	3177.9	30	0	1027.1	0.032			+	26113	LSPAPGVGN	9	43	406.21876164499895	810.4229703567979	2	406.21929931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSPAPGVGN_	REV__ENSG00000163704|ENST00000412055|PRRT3;REV__nc|ENSG00000163704|Q5FWE3-2|PRRT3	44.116797842482775	0.37197099687881774	1				NaN	NaN	0	NaN	3394	3602	6995
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7009	23.974	NaN	2249	30	0	361.21	0.214	+			691	AEALPKQSV	9	57	471.7659842104517	941.5174154877034	2	471.7656555175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEALPKQSV_	ENSG00000145741|ENST00000380591|BTF3;nc|ENSG00000145741|P20290-2|BTF3	67.49366992349736	0.1516260258713357	1				NaN	NaN	0	NaN	3402	3605	7008
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7010	23.978	NaN	7129	30	0	4019.9	0.106	+			14637	GTGTIIVAK	9	56	430.2657839141225	858.517014895045	2	430.2654724121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTGTIIVAK_	ENSG00000083857|ENST00000441802|FAT1;FAT1|p.G2934Vfs*3|2|0.37|ENSG00000083857|chr4:186617787-186617787|T/-|frameshift_variant;FAT1|p.N3847Yfs*7|1|0.03|ENSG00000083857|chr4:186601370-186601371|-/TTATA|frameshift_variant;FAT1|p.P3228Lfs*42|1|0.27|ENSG00000083857|chr4:186611556-186611556|G/-|frameshift_variant;FAT1|p.P4313Lfs*36|1|0.34|ENSG00000083857|chr4:186596602-186596602|G/-|frameshift_variant;FAT1|p.Q2933Hfs*14|1|0.33|ENSG00000083857|chr4:186617787-186617788|-/G|frameshift_variant;FAT1|p.V1878Cfs*8|2|0.22|ENSG00000083857|chr4:186620955-186620956|-/G|frameshift_variant	60.11826168202944	0.21262886028301267	1				NaN	NaN	0	NaN	3403	3605	7008
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7011	23.98	NaN	3116.2	30	0	698.92	0.106			+	-1	SCLALPAR	8	53	444.24139759209294	886.4682422509859	2	444.24151611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SC(Carbamidomethyl (C))LALPAR_	REV__ENST00000293883.8_3_16:740088-740325:-|nuORF	38.80614096846853	0.6637206697844082	1				NaN	NaN	0	NaN	3404	3605	7008
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7012	23.982	NaN	3011.3	30	0	643.8	0.035	+			26495	LTMKVAVNK	9	34	335.2035408474143	1002.5887931424429	3	335.203857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LTMKVAVNK_	ENST00000418474.1_1_2:160472985-160473165:+|nuORF	37.15910966729921	0.4535818937225704	1				NaN	NaN	0	NaN	3405	3605	7008
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7024	24.007	NaN	4993.3	30	0	1100.6	0.214	+			47672	VSDQVQIK	8	63	458.75851239431455	915.5024718554291	2	458.75830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSDQVQIK_	ENSG00000108588|ENST00000225726|CCDC47;nc|ENSG00000108588|Q96A33-2|CCDC47	62.107414245175825	0.4809183816468817	1				NaN	NaN	0	NaN	3414	3608	7023
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7025	24.011	NaN	3781	30	0	505.13	0.106	+			48521	VTNNSGYITN	10	72	541.7590639894258	1081.5035750456516	2	541.759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTNNSGYITN_	ENSG00000108256|ENST00000225388|NUFIP2;NUFIP2|p.K314Sfs*39|1|0.16|ENSG00000108256|chr17:29287053-29287053|T/-|frameshift_variant;NUFIP2|p.Y664Lfs*18|1|0.04|ENSG00000108256|chr17:29285997-29286003|GTGTGAT/-|frameshift_variant	53.08895987439943	0.42869529153390606	1				NaN	NaN	0	NaN	3415	3608	7023
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7026	24.013	NaN	1455.6	30	0	133.12	0.106			+	9560	ELFVQLVR	8	56	502.30187245912725	1002.5891919850545	2	502.302001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ELFVQLVR_	REV__ENST00000376687.3_1_X:48555153-48557380:+|nuORF	42.47446043378293	0.6409579893742323	1				NaN	NaN	0	NaN	3416	3608	7023
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7027	24.015	NaN	7138.1	30	0	1589.7	0.106				-1	RVCNVTRRP	9	50	386.54842008973407	1156.6234308694022	3	386.5483703613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_RVC(Carbamidomethyl (C))NVTRRP_	AGO2|p.G422Afs*46|1|0.4|ENSG00000123908|chr8:140555900-140555900|C/-|frameshift_variant;AGO2|p.K355Nfs*2|1|0.21|ENSG00000123908|chr8:140556248-140556248|T/-|frameshift_variant;AGO2|p.R688Pfs*2|1|0.33|ENSG00000123908|chr8:140539428-140539429|-/A|frameshift_variant;AGO4|p.E724Kfs*16|1|0.24|ENSG00000134698|chr1:35841744-35841745|AG/-|frameshift_variant;ENSG00000092847|ENST00000373204|AGO1;ENSG00000123908|ENST00000220592|AGO2;ENSG00000126070|ENST00000373191|AGO3;ENSG00000134698|ENST00000373210|AGO4;nc|ENSG00000123908|Q9UKV8-2|AGO2;nc|ENSG00000126070|Q9H9G7-2|AGO3	24.519189625965996	0.574102787014149	1				NaN	NaN	0	NaN	3417	3608	7023
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7028	24.016	NaN	3477.7	30	0	555.64	0.106			+	-1	SNSLTVACP	9	62	474.72621185688365	947.4378707805673	2	474.7264404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_SNSLTVAC(Carbamidomethyl (C))P_	REV__ENSG00000198718|ENST00000361462|TOGARAM1;REV__ENST00000555607.1_1_14:45431624-45475488:+|nuORF;REV__ENST00000555945.1_1_14:45431624-45465140:+|nuORF;REV__nc|ENSG00000198718|Q9Y4F4-2|TOGARAM1;REV__nc|ENSG00000198718|Q9Y4F4-3|TOGARAM1;REV__nc|ENSG00000198718|Q9Y4F4|TOGARAM1	26.69291269510374	0.5537881896960711	1				NaN	NaN	0	NaN	3418	3608	7023
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7029	24.018	NaN	6482.1	30	0	2611.2	0.037				-1	GSITMTCTAFG	11	51	382.5034767463895	1144.4886008393685	3	382.50439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_GSITMTC(Carbamidomethyl (C))TAFG_	ENSG00000080854|ENST00000533871|IGSF9B;IGSF9B|p.E216Rfs*61|1|0.28|ENSG00000080854|chr11:133937409-133937409|C/-|frameshift_variant;IGSF9B|p.T1083Hfs*72|2|0.42|ENSG00000080854|chr11:133920478-133920479|-/G|frameshift_variant;IGSF9B|p.T1083Pfs*48|1|0.11|ENSG00000080854|chr11:133920479-133920479|G/-|frameshift_variant;nc|ENSG00000080854|Q9UPX0|IGSF9B	30.568863376406313	0.6691487505135859	1				NaN	NaN	0	NaN	3419	3608	7023
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7030	24.019	NaN	1444.5	30	0	661.62	0.139	+			32099	QSGEFEKR	8	39	490.7432212144338	NaN	0	490.7435302734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QSGEFEKR_	ENSG00000134982|ENST00000257430|APC;nc|ENSG00000134982|P25054-2|APC;nc|ENSG00000134982|P25054-3|APC	24.519189625965996	1.7418937515398478	1				NaN	NaN	0	NaN	3420	3608	7023
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7041	24.046	NaN	6183.5	30	0	739.22	0.215	+			6802	CGFAAMKDVRT	11	53	400.193865028059	NaN	0	400.1939392089844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CGFAAMKDVRT_	EDEM3|p.F658Lfs*4|1|0.35|ENSG00000116406|chr1:184708216-184708216|A/-|frameshift_variant;ENSG00000116406|ENST00000318130|EDEM3;nc|ENSG00000116406|Q9BZQ6-2|EDEM3	55.08391021199286	0.27880418946526786	1				NaN	NaN	0	NaN	3428	3611	7040
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7042	24.049	NaN	5637.7	30	0	782.49	0.106			+	23761	LCGGLCVTAL	10	65	475.24533864154415	948.4761243498883	2	475.2453308105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LCGGLCVTAL_	REV__ENSG00000129566|ENST00000262715|TEP1;REV__ENST00000557314.5_1_14:20839728-20850189:-|nuORF;REV__nc|ENSG00000129566|Q99973-2|TEP1;REV__TEP1|p.V1856Lfs*45|3|0.41|ENSG00000129566|chr14:20378179-20378179|C/-|frameshift_variant	53.351449002276354	0.42630798468005626	1				NaN	NaN	0	NaN	3429	3611	7040
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7043	24.051	NaN	4548	30	0	813.99	0.106	+			46914	VIVDSTVGK	9	59	459.2681973077718	NaN	0	459.2682800292969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VIVDSTVGK_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	29.14955571784316	0.3303970763161698	1				NaN	NaN	0	NaN	3430	3611	7040
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7044	24.053	NaN	5037.6	30	0	3609	0.106			+	37129	SITRQFTK	8	47	490.7797031274561	979.5448533217123	2	490.7801208496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SITRQFTK_	REV__ENSG00000162402|ENST00000294383|USP24	27.882242232435846	0.7440473649773525	1				NaN	NaN	0	NaN	3431	3611	7040
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7045	24.055	NaN	1237.8	30	0	140.41	0.106	+			36560	SFQASSTQSQK	11	52	599.7875694498166	NaN	0	599.7874755859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SFQASSTQSQK_	ENST00000525183.1_1_11:75852185-75852305:+|nuORF	35.495647763667336	0.40722694788826996	1				NaN	NaN	0	NaN	3432	3611	7040
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7046	24.057	NaN	656.8	30	0	430.03	0.035	+			9767	ENLRRPVV	8	12	328.1978759765625	NaN	0	328.1978759765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ENLRRPVV_	sp|P16788|UL97_HCMVASerine/threonineproteinkinaseUL97OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL97PE=1SV=1	10.865556482863946	1.7418937515398478	1				NaN	NaN	0	NaN	3433	3611	7040
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7047	24.057	NaN	4678.2	30	0	448.65	0.141	+			38202	SQFSGKITVK	10	64	547.8135478066687	1093.6125426801373	2	548.31591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SQFSGKITVK_	ENSG00000075568|ENST00000186436|TMEM131;TMEM131|p.G555Wfs*10|1|0.32|ENSG00000075568|chr2:97812704-97812705|-/A|frameshift_variant;TMEM131|p.L1469Tfs*5|1|0.43|ENSG00000075568|chr2:97772340-97772341|-/T|frameshift_variant;TMEM131|p.L538Ffs*27|1|0.09|ENSG00000075568|chr2:97813974-97813975|-/A|frameshift_variant;TMEM131|p.N815Ifs*2|1|0.27|ENSG00000075568|chr2:97802749-97802749|T/-|frameshift_variant;TMEM131|p.N815Kfs*9|1|0.31|ENSG00000075568|chr2:97802748-97802749|-/T|frameshift_variant	109.38876744936951	0.04981476430394371	1				NaN	NaN	0	NaN	3434	3611	7040
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7059	24.085	NaN	20446	30	0	4171.8	0.214	+			44126	TQANCFTYRL	10	63	406.1970775589615	1215.5694032770846	3	406.197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TQANCFTYRL_	SIAH3|p.D197N|1|0.34|ENSG00000215475|chr13:45783604-45783604|C/T|missense_variant	25.57405402267927	0.6709832231498071	1				NaN	NaN	0	NaN	3443	3614	7058
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7060	24.088	NaN	3047.3	30	0	326.71	0.106	+			11008	FEKDVKGESL	10	64	576.3006713412324	1150.5867897492647	2	576.3013305664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FEKDVKGESL_	ENSG00000119888|ENST00000263735|EPCAM	115.23196543181992	0.034063879665207575	1				NaN	NaN	0	NaN	3444	3614	7058
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7061	24.09	NaN	2004.6	30	0	337.38	0.034			+	45065	TVHLRVGH	8	52	459.76607675428806	917.5176005753762	2	459.7691955566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVHLRVGH_	REV__ENSG00000197046|ENST00000389474|SIGLEC15	30.503639358989545	0.7238069182250283	1				NaN	NaN	0	NaN	3445	3614	7058
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7073	24.116	NaN	6708.8	30	0	1554.2	0.214	+			2839	ASAIPAYSK	9	66	454.2475883161426	906.4806236990852	2	454.24774169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASAIPAYSK_	ENSG00000090054|ENST00000262554|SPTLC1;SPTLC1|p.E218Afs*44|1|0.36|ENSG00000090054|chr9:92059215-92059216|CT/-|frameshift_variant	54.722347961057174	0.257609425301511	1				NaN	NaN	0	NaN	3454	3617	7072
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7074	24.119	NaN	4184.1	30	0	807.37	0.106			+	-1	CFIVGGIICL	10	49	384.53601860823926	1150.5862264249179	3	384.5362548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))FIVGGIIC(Carbamidomethyl (C))L_	REV__ENSG00000134873|ENST00000299339|CLDN10;REV__nc|ENSG00000134873|P78369-2|CLDN10;REV__nc|ENSG00000134873|P78369-3|CLDN10	39.252832667884924	0.5560298534376815	1				NaN	NaN	0	NaN	3455	3617	7072
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7075	24.121	NaN	2006.4	30	0	384.25	0.106	+			16065	HAYLSKNSL	9	61	516.7772267300127	NaN	0	516.7774047851562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HAYLSKNSL_	ENSG00000131236|ENST00000372805|CAP1;ENST00000417455.1_1_10:44100293-44100833:-|nuORF;ENST00000461993.1_1_1:40535258-40537202:+|nuORF;ENST00000476047.1_1_3:76483919-76484456:+|nuORF;ENST00000494114.1_1_1:40536414-40537202:+|nuORF;nc|ENSG00000131236|Q01518-2|CAP1	101.60071028292904	0.0182107634719595	1				NaN	NaN	0	NaN	3456	3617	7072
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7076	24.123	NaN	863.91	30	0	67.818	0.106	+			12709	GEKSESISV	9	41	468.2376036992406	NaN	0	468.2370300292969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEKSESISV_	ENSG00000198315|ENST00000330236|ZKSCAN8	41.42661286455405	0.26577678759562784	1				NaN	NaN	0	NaN	3457	3617	7072
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7077	24.125	NaN	1518.9	30	0	274.01	0.037	+			11990	FVSCAYICL	9	34	378.17803049923793	NaN	0	378.1783447265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C)	_FVSC(Carbamidomethyl (C))AYIC(Carbamidomethyl (C))L_	ENST00000548432.5_1_12:82832322-82872800:+|nuORF	42.396135135203025	0.2590952873412954	1				NaN	NaN	0	NaN	3458	3617	7072
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7089	24.15	NaN	14978	30	0	2978.6	0.214	+			14723	GTISAITSK	9	59	439.2528291137732	876.4911052943464	2	439.2528991699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTISAITSK_	ENSG00000145113|ENST00000463781|MUC4;MUC4|p.L3985Ffs*274|1|0.3|ENSG00000145113|chr3:195779627-195779627|G/-|frameshift_variant;MUC4|p.N4902Tfs*8|1|0.37|ENSG00000145113|chr3:195761027-195761027|T/-|frameshift_variant;nc|ENSG00000145113|Q99102-10|MUC4;nc|ENSG00000145113|Q99102-11|MUC4;nc|ENSG00000145113|Q99102-15|MUC4;nc|ENSG00000145113|Q99102-16|MUC4;nc|ENSG00000145113|Q99102-17|MUC4;nc|ENSG00000145113|Q99102-2|MUC4;nc|ENSG00000145113|Q99102-3|MUC4;nc|ENSG00000145113|Q99102-5|MUC4;nc|ENSG00000145113|Q99102-7|MUC4;nc|ENSG00000145113|Q99102-8|MUC4;nc|ENSG00000145113|Q99102-9|MUC4	176.44474024533739	0.0016668318535579616	1				NaN	NaN	0	NaN	3467	3620	7088
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7090	24.154	NaN	1987.2	30	0	293.97	0.106	+			20216	KELIDHQL	8	53	498.2791681097629	994.5437832863258	2	498.2793884277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KELIDHQL_	ENST00000493152.6_1_13:48510839-48517485:-|nuORF	104.74654710444128	0.24806011021879068	1				NaN	NaN	0	NaN	3468	3620	7088
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7091	24.156	NaN	3034.1	30	0	370.46	0.106			+	43022	TEKSPLTNK	9	66	509.28225222229275	NaN	0	509.2825012207031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TEKSPLTNK_	REV__ENSG00000158164|ENST00000289373|TMSB15A;REV__ENSG00000158427|ENST00000540220|TMSB15B;REV__ENSG00000269226|ENST00000598087|TMSB15C	53.351449002276354	0.18359631779194618	1				NaN	NaN	0	NaN	3469	3620	7088
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7092	24.158	NaN	1106.1	30	0	342.59	0.106			+	25033	LLHGTAVLPS	10	38	504.2978021665394	1006.5810513998788	2	504.2984619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LLHGTAVLPS_	REV__HCRTR2|p.P11Lfs*11|3|0.25|ENSG00000137252|chr6:55174613-55174613|C/-|frameshift_variant	37.15910966729921	0.575322462179216	1				NaN	NaN	0	NaN	3470	3620	7088
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7093	24.16	NaN	2146.7	30	0	595.08	0.033	+			49105	VVLGSGGVGK	10	49	436.76342808666004	871.5123032401201	2	436.76361083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVLGSGGVGK_	ENSG00000116473|ENST00000369709|RAP1A;ENSG00000123728|ENST00000370874|RAP2C;ENSG00000125249|ENST00000245304|RAP2A;ENSG00000127314|ENST00000250559|RAP1B;ENSG00000181467|ENST00000323534|RAP2B;ENST00000460800.5_1_12:69042504-69044290:+|nuORF;ENST00000494982.1_1_1:112233982-112249293:+|nuORF;ENST00000501412.2_1_12:69042504-69042582:+|nuORF;ENST00000535492.5_2_12:69042504-69047907:+|nuORF;nc|ENSG00000127314|P61224-2|RAP1B;nc|ENSG00000127314|P61224-3|RAP1B;nc|ENSG00000127314|P61224-4|RAP1B;RAP2B|p.F39Lfs*6|1|0.34|ENSG00000181467|chr3:153162808-153162809|TT/-|frameshift_variant	95.81516180277367	0.09778090853194907	1				NaN	NaN	0	NaN	3471	3620	7088
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7105	24.185	NaN	2684.1	30	0	301.04	0.214			+	21894	KRRGRLGQ	8	60	485.80582865245333	969.5971043717067	2	485.8056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KRRGRLGQ_	REV__ENST00000514738.5_1_5:31193947-31267460:+|nuORF	47.91560031466742	0.6071945918984287	1				NaN	NaN	0	NaN	3480	3623	7104
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7106	24.189	NaN	1530.7	30	0	92.987	0.033			+	46143	VDPGKLKV	8	49	428.2682382130429	854.5219234928858	2	428.2677307128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VDPGKLKV_	REV__AHNAK|p.E5274K|1|0.34|ENSG00000124942|chr11:62518597-62518597|C/T|missense_variant	44.116797842482775	0.6307669463330267	1				NaN	NaN	0	NaN	3481	3623	7104
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7112	24.205	NaN	3347.7	30	0	807.97	0.214			+	11175	FGQSNTATVD	10	55	520.2384482522169	1038.4623435712338	2	520.2393188476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FGQSNTATVD_	REV__ENSG00000197530|ENST00000355826|MIB2;REV__ENST00000479659.5_1_1:1561777-1565907:+|nuORF;REV__ENST00000506488.5_1_1:1562112-1565907:+|nuORF;REV__ENST00000507229.5_1_1:1551767-1563881:+|nuORF;REV__ENST00000511502.5_1_1:1550926-1563560:+|nuORF;REV__MIB2|p.D840Tfs*22|1|0.39|ENSG00000197530|chr1:1628687-1628687|G/-|frameshift_variant;REV__nc|ENSG00000197530|Q96AX9-10|MIB2;REV__nc|ENSG00000197530|Q96AX9-3|MIB2;REV__nc|ENSG00000197530|Q96AX9-4|MIB2;REV__nc|ENSG00000197530|Q96AX9-5|MIB2;REV__nc|ENSG00000197530|Q96AX9-6|MIB2;REV__nc|ENSG00000197530|Q96AX9-7|MIB2;REV__nc|ENSG00000197530|Q96AX9-8|MIB2;REV__nc|ENSG00000197530|Q96AX9-9|MIB2	30.317721548370564	0.6322445173429027	1				NaN	NaN	0	NaN	3484	3626	7111
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7113	24.208	NaN	7607.1	30	0	1568.7	0.106			+	-1	SRCSGIRAST	10	33	365.5172417592522	1093.5298958779567	3	365.5175476074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SRC(Carbamidomethyl (C))SGIRAST_	REV__PPP2R5D|p.K13Rfs*94|2|0.35|ENSG00000112640|chr6:42989614-42989614|C/-|frameshift_variant;REV__PPP2R5D|p.Q79Rfs*28|1|0.18|ENSG00000112640|chr6:43006583-43006583|G/-|frameshift_variant;REV__PPP2R5D|p.T67Rfs*40|1|0.18|ENSG00000112640|chr6:43006550-43006550|C/-|frameshift_variant	28.081489160057373	0.6505064946289502	1				NaN	NaN	0	NaN	3485	3626	7111
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7114	24.21	NaN	2339.3	30	0	191.33	0.034			+	19457	KARTQTIL	8	57	465.79058264103	929.5666123488601	2	465.7906799316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KARTQTIL_	REV__ENSG00000167881|ENST00000307877|SRP68;REV__nc|ENSG00000167881|Q9UHB9-4|SRP68	51.33545320467046	0.5859736979383976	1				NaN	NaN	0	NaN	3486	3626	7111
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7125	24.235	NaN	2618.3	30	0	564.67	0.214	+			41962	SVWHGTLSK	9	56	507.7721262421401	1013.5296995510802	2	507.7729187011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVWHGTLSK_	ENSG00000136270|ENST00000258770|TBRG4;nc|ENSG00000136270|Q969Z0-2|TBRG4;TBRG4|p.L492Cfs*9|2|0.32|ENSG00000136270|chr7:45101918-45101918|G/-|frameshift_variant	67.49366992349736	0.1516260258713357	1				NaN	NaN	0	NaN	3494	3629	7124
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7126	24.239	NaN	4092.1	30	0	746.28	0.106	+			14877	GTLPHPLQR	9	65	509.792583684361	1017.570614435522	2	509.7934875488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTLPHPLQR_	ENSG00000111319|ENST00000228916|SCNN1A;ENST00000540037.5_2_12:6464995-6472854:-|nuORF;nc|ENSG00000111319|P37088-2|SCNN1A;nc|ENSG00000111319|P37088-3|SCNN1A;nc|ENSG00000111319|P37088-4|SCNN1A;nc|ENSG00000111319|P37088-5|SCNN1A;nc|ENSG00000111319|P37088-6|SCNN1A	47.657333605630114	0.33044192980041115	1				NaN	NaN	0	NaN	3495	3629	7124
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7127	24.241	NaN	4270.7	30	0	897.46	0.106	+			3596	ASVNTLVNK	9	69	473.2716447394872	944.5287365457744	2	473.2721252441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASVNTLVNK_	ARFIP1|p.K303Nfs*13|1|0.22|ENSG00000164144|chr4:152888246-152888246|A/-|frameshift_variant;ENSG00000164144|ENST00000353617|ARFIP1;nc|ENSG00000164144|P53367-2|ARFIP1;nc|ENSG00000164144|P53367-3|ARFIP1	93.5975768576971	0.05472259948179787	1				NaN	NaN	0	NaN	3496	3629	7124
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7128	24.243	NaN	834.16	30	0	81.166	0.106			+	8110	DYMEVCLL	8	40	493.2238802360935	NaN	0	493.2242736816406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DYMEVCLL_	REV__nc|ENSG00000189430|O76036-5|NCR1	33.51558372728122	1.7418937515398478	1				NaN	NaN	0	NaN	3497	3629	7124
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7129	24.245	NaN	858.46	30	0	136.86	0.035	+			10987	FEFSGAFLL	9	42	515.7646484375	NaN	0	515.7646484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FEFSGAFLL_	MTMR6|p.E419G|1|0.07|ENSG00000139505|chr13:25253854-25253854|T/C|missense_variant	40.77816245573522	0.2702456086868081	1				NaN	NaN	0	NaN	3498	3629	7124
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7139	24.268	NaN	5210.4	30	0	535.21	0.141	+			42626	TAVEAGRAL	9	59	444.2503187228076	886.4860845124152	2	444.2513122558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAVEAGRAL_	ENSG00000032444|ENST00000600737|PNPLA6;nc|ENSG00000032444|Q8IY17-2|PNPLA6;nc|ENSG00000032444|Q8IY17-3|PNPLA6;nc|ENSG00000032444|Q8IY17-5|PNPLA6;nc|ENSG00000032444|Q8IY17|PNPLA6;PNPLA6|p.S1175Pfs*10|1|0.55|ENSG00000032444|chr19:7558944-7558944|G/-|frameshift_variant	65.46538089061403	0.16805504838372562	1				NaN	NaN	0	NaN	3505	3632	7138
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7151	24.296	NaN	31269	30	0	6308.9	0.214	+			45167	TVMDKTRAL	9	80	517.7860862314558	1033.5576195297115	2	517.7868041992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVMDKTRAL_	CARD17-CASP1|1|fusion;CARD17-CASP1|2|fusion;CASP1|p.N205Ifs*7|1|0.4|ENSG00000137752|chr11:105030343-105030343|T/-|frameshift_variant;ENSG00000137752|ENST00000533400|CASP1;ENSG00000204397|ENST00000673097|CARD16;ENST00000526511.5_1_11:104901858-104905840:-|nuORF;ENST00000527065.1_1_11:104915107-104915377:-|nuORF;nc|ENSG00000137752|P29466-2|CASP1;nc|ENSG00000204397|Q5EG05|CARD16	83.6470233535746	0.08277643980271215	1				NaN	NaN	0	NaN	3514	3635	7150
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7152	24.299	NaN	11551	30	0	4096.6	0.106	+			4563	ATLEETLVKKK	11	54	420.5901001196599	1258.7484709591797	3	420.59039306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATLEETLVKKK_	ENSG00000254093|ENST00000314787|PINX1	41.080066990542036	0.5431644350485484	1				NaN	NaN	0	NaN	3515	3635	7150
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7153	24.301	NaN	12757	30	0	8737	0.106				-1	 	0	40	322.19349931596594	642.3724456987319	2	322.193603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	3516	3635	7150
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7154	24.303	NaN	2481.1	30	0	897.07	0.106	+			30493	QAFESSQKY	9	59	544.2557933714693	1086.4970338097385	2	544.2568969726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QAFESSQKY_	ENSG00000090238|ENST00000398841|YPEL3;ENST00000565479.5_1_16:30104033-30107516:-|nuORF;nc|ENSG00000090238|P61236|YPEL3	87.69643885390035	0.07135982304947239	1				NaN	NaN	0	NaN	3517	3635	7150
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7155	24.305	NaN	2667.5	30	0	381.11	0.035			+	20668	KGLPAGPLSPG	11	60	497.2896902044274	992.5648274756549	2	497.2907409667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KGLPAGPLSPG_	REV__ENST00000417456.1_1_1:35441975-35442986:-|nuORF	69.6276240434122	0.23884409287757344	1				NaN	NaN	0	NaN	3518	3635	7150
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7166	24.33	NaN	4339.6	30	0	2112.2	0.214	+			2937	ASDPHIIIK	9	36	331.8622959103913	992.565058331374	3	331.86224365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASDPHIIIK_	ENSG00000134313|ENST00000256707|KIDINS220;ENST00000488729.5_1_2:8870852-8965899:-|nuORF;KIDINS220|p.K1581Rfs*8|1|0.28|ENSG00000134313|chr2:8731294-8731294|T/-|frameshift_variant;KIDINS220|p.P1081Rfs*48|1|0.22|ENSG00000134313|chr2:8750284-8750284|G/-|frameshift_variant;KIDINS220|p.R1551Efs*38|1|0.08|ENSG00000134313|chr2:8731386-8731386|C/-|frameshift_variant;nc|ENSG00000134313|Q9ULH0-2|KIDINS220;nc|ENSG00000134313|Q9ULH0-3|KIDINS220;nc|ENSG00000134313|Q9ULH0-4|KIDINS220	38.80614096846853	0.43426287593479557	1				NaN	NaN	0	NaN	3526	3638	7165
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7167	24.333	NaN	517.32	30	0	45.244	0.106				-1	 	0	28	360.74162476122183	719.4686965892437	2	360.7416687011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	3527	3638	7165
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7168	24.335	NaN	2894.9	30	0	670.05	0.106	+			40876	SVFHASLAK	9	54	480.2688033073908	958.5230536815816	2	480.2685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVFHASLAK_	ENSG00000064651|ENST00000262461|SLC12A2;nc|ENSG00000064651|P55011-3|SLC12A2;SLC12A2|p.E1119Rfs*7|1|0.47|ENSG00000064651|chr5:128184417-128184418|-/A|frameshift_variant;SLC12A2|p.P1171Sfs*18|1|0.38|ENSG00000064651|chr5:128186498-128186499|-/TC|frameshift_variant	112.41091882917199	0.026537921851008135	1				NaN	NaN	0	NaN	3528	3638	7165
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7169	24.337	NaN	804.38	30	0	71.443	0.106	+			10080	ESIRRGGR	8	49	465.7658886024962	NaN	0	465.76593017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ESIRRGGR_	ENST00000514199.1_1_5:139944539-139945076:+|nuORF	53.351449002276354	1.7418937515398478	1				NaN	NaN	0	NaN	3529	3638	7165
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7170	24.339	NaN	873.57	30	0	94.259	0.034				-1	YIMPVGVE	8	36	462.2295317501381	NaN	0	462.2300109863281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_YIM(Oxidation (M))PVGVE_	ENSG00000116996|ENST00000366570|ZP4	29.841539824830324	1.7418937515398478	1				NaN	NaN	0	NaN	3530	3638	7165
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7179	24.359	NaN	5986.9	30	0	1588.7	0.214	+			40032	STMVDVRVMKK	11	52	431.9049493572668	1292.6930186720003	3	431.90496826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STMVDVRVMKK_	ENSG00000085224|ENST00000373344|ATRX;nc|ENSG00000085224|P46100-2|ATRX;nc|ENSG00000085224|P46100-3|ATRX;nc|ENSG00000085224|P46100-4|ATRX;nc|ENSG00000085224|P46100-5|ATRX	58.2462437865262	0.33910980880557884	1				NaN	NaN	0	NaN	3536	3641	7178
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7180	24.363	NaN	1639.1	30	0	194.74	0.033			+	24488	LGGWVCVV	8	56	445.23489849729947	888.455244061399	2	445.2347106933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LGGWVC(Carbamidomethyl (C))VV_	REV__ENST00000426335.6_1_11:47186895-47187006:-|nuORF	67.3271909547111	0.42924334279516513	1				NaN	NaN	0	NaN	3537	3641	7178
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7190	24.385	NaN	1581.8	30	0	149.12	0.214	+			18646	ISTQNVVGLN	10	59	522.7875626056983	1043.5605722781966	2	522.78857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ISTQNVVGLN_	ENSG00000118689|ENST00000406360|FOXO3;nc|ENSG00000118689|O43524-2|FOXO3	51.19269402634007	0.44601001148513897	1				NaN	NaN	0	NaN	3544	3644	7189
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7191	24.388	NaN	1768.9	30	0	360.45	0.106			+	-1	TLSSVKMC	8	47	471.2248040935947	940.4350552539894	2	471.2247619628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_TLSSVKM(Oxidation (M))C(Carbamidomethyl (C))_	REV__ENST00000370520.3_1_20:61273322-61274596:-|nuORF	35.61828744233558	0.6843154725607303	1				NaN	NaN	0	NaN	3545	3644	7189
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7192	24.39	NaN	1035.1	30	0	124.08	0.106			+	46641	VGCRAGPAL	9	43	422.2285662539673	842.4425795747346	2	422.2287902832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VGCRAGPAL_	REV__ENSG00000160224|ENST00000291582|AIRE;REV__nc|ENSG00000160224|O43918-2|AIRE;REV__nc|ENSG00000160224|O43918-4|AIRE	47.91560031466742	0.327412564698279	1				NaN	NaN	0	NaN	3546	3644	7189
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7193	24.392	NaN	2196.4	30	0	778.37	0.039	+			8134	EAAAAPAVAG	10	47	414.21539306640625	NaN	0	414.21539306640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EAAAAPAVAG_	ENST00000310677.8_1_14:24791428-24793534:-|nuORF;ENST00000554577.5_1_14:24791773-24793534:-|nuORF;ENST00000554936.1_1_14:24791773-24792709:-|nuORF	30.503639358989545	0.4000169810673414	1				NaN	NaN	0	NaN	3547	3644	7189
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7204	24.417	NaN	8034.9	30	0	1927.8	0.214	+			45090	TVIHFNNPK	9	68	535.2928275916449	1068.5711022500898	2	535.2938232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVIHFNNPK_	ENSG00000134717|ENST00000313334|BTF3L4;ENSG00000145741|ENST00000380591|BTF3;ENST00000418879.1_1_6:137865036-137865375:-|nuORF;nc|ENSG00000134717|Q96K17-2|BTF3L4;nc|ENSG00000145741|P20290-2|BTF3	114.8945686534367	0.024290463251177924	1				NaN	NaN	0	NaN	3555	3647	7203
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7205	24.421	NaN	1731.1	30	0	334.65	0.106			+	20233	KELSSIGLL	9	52	480.29198944193683	958.5694259506737	2	480.29193115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KELSSIGLL_	REV__ENSG00000169660|ENST00000327949|HEXD;REV__ENST00000578616.5_3_17:80398383-80400257:+|nuORF;REV__ENST00000582429.5_3_17:80398119-80400257:+|nuORF;REV__nc|ENSG00000169660|Q8WVB3-2|HEXD	42.396135135203025	0.392153681582562	1				NaN	NaN	0	NaN	3556	3647	7203
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7206	24.423	NaN	6045.1	30	0	525.51	0.106				-1	 	0	73	474.76068565699	947.50681838078	2	474.7610168457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	3557	3647	7203
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7207	24.424	NaN	1406.1	30	0	123.87	0.106	+			40786	SVDPVSVNR	9	52	486.75870711562493	971.5028612980499	2	486.75830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVDPVSVNR_	ENSG00000143437|ENST00000358595|ARNT;ENST00000468970.1_1_1:150804279-150808966:-|nuORF;nc|ENSG00000143437|P27540-2|ARNT;nc|ENSG00000143437|P27540-3|ARNT;nc|ENSG00000143437|P27540-4|ARNT	42.86426827375447	0.38666266728046506	1				NaN	NaN	0	NaN	3558	3647	7203
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7208	24.426	NaN	836	30	0	154.52	0.106	+			30262	PTCRECGKTF	10	44	571.2614413536753	NaN	0	571.26025390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PTCRECGKTF_	ENSG00000154957|ENST00000580306|ZNF18;nc|ENSG00000154957|P17022-2|ZNF18;ZNF18|p.H426Sfs*40|1|0.31|ENSG00000154957|chr17:11978331-11978332|-/A|frameshift_variant	24.519189625965996	0.41966695327750003	1				NaN	NaN	0	NaN	3559	3647	7203
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7209	24.428	NaN	1101	30	0	77.271	0.036	+			11443	FMGPRWRRRWF	11	48	532.2803344726562	NaN	0	532.2803344726562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FMGPRWRRRWF_	CNKSR1|p.H694Tfs*16|1|0.42|ENSG00000142675|chr1:26189460-26189460|C/-|frameshift_variant;CNKSR1|p.P512Hfs*58|2|0.35|ENSG00000142675|chr1:26188287-26188287|C/-|frameshift_variant;CNKSR1|p.P513Tfs*9|2|0.38|ENSG00000142675|chr1:26188286-26188287|-/C|frameshift_variant;ENSG00000142675|ENST00000361530|CNKSR1;nc|ENSG00000142675|Q969H4|CNKSR1	19.262678746197807	0.456735970842152	1				NaN	NaN	0	NaN	3560	3647	7203
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7210	24.429	NaN	1042.8	30	0	95.133	0.139			+	48077	VSSTDTVPL	9	49	459.74139404296875	NaN	0	459.74139404296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VSSTDTVPL_	REV__ENSG00000145113|ENST00000463781|MUC4;REV__ENSG00000145113|ENST00000463781|MUC4;REV__ENSG00000145113|ENST00000463781|MUC4;REV__ENSG00000145113|ENST00000463781|MUC4;REV__ENSG00000145113|ENST00000463781|MUC4;REV__ENSG00000145113|ENST00000463781|MUC4;REV__ENSG00000145113|ENST00000463781|MUC4;REV__MUC4|p.G3516_H3517insDTTTLPVTDTSSVSTGHATPLPVTSFSSVSTGDTTPLPVTDASSASTG|2|0.0|ENSG00000145113|chr3:195781031-195781032|-/ACCGGTGGATGCCGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATACTGAGGAAAAGCTGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGTCGTGGTGTC|inframe_insertion;REV__MUC4|p.H3517_A3518insTTTLPVTDTSSVSTGHATPLPVTSFSSVSTGDTTPLPVTDASSASTGH|1|0.0|ENSG00000145113|chr3:195781028-195781029|-/GTGACCGGTGGATGCCGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATACTGAGGAAAAGCTGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGTCGTGGT|inframe_insertion;REV__MUC4|p.L3985Ffs*274|1|0.3|ENSG00000145113|chr3:195779627-195779627|G/-|frameshift_variant;REV__MUC4|p.L3985Ffs*274|1|0.3|ENSG00000145113|chr3:195779627-195779627|G/-|frameshift_variant;REV__MUC4|p.L3985Ffs*274|1|0.3|ENSG00000145113|chr3:195779627-195779627|G/-|frameshift_variant;REV__MUC4|p.L3985Ffs*274|1|0.3|ENSG00000145113|chr3:195779627-195779627|G/-|frameshift_variant;REV__MUC4|p.L3985Ffs*274|1|0.3|ENSG00000145113|chr3:195779627-195779627|G/-|frameshift_variant;REV__MUC4|p.L3985Ffs*274|1|0.3|ENSG00000145113|chr3:195779627-195779627|G/-|frameshift_variant;REV__MUC4|p.N4902Tfs*8|1|0.37|ENSG00000145113|chr3:195761027-195761027|T/-|frameshift_variant;REV__MUC4|p.N4902Tfs*8|1|0.37|ENSG00000145113|chr3:195761027-195761027|T/-|frameshift_variant;REV__MUC4|p.N4902Tfs*8|1|0.37|ENSG00000145113|chr3:195761027-195761027|T/-|frameshift_variant;REV__MUC4|p.N4902Tfs*8|1|0.37|ENSG00000145113|chr3:195761027-195761027|T/-|frameshift_variant;REV__MUC4|p.N4902Tfs*8|1|0.37|ENSG00000145113|chr3:195761027-195761027|T/-|frameshift_variant;REV__MUC4|p.N4902Tfs*8|1|0.37|ENSG00000145113|chr3:195761027-195761027|T/-|frameshift_variant;REV__MUC4|p.N4902Tfs*8|1|0.37|ENSG00000145113|chr3:195761027-195761027|T/-|frameshift_variant;REV__MUC4|p.T3519_P3520insTLPVTDTSSVSTGHATPLPVTSFSSVSTGDTTPLPVTDASSASTGHAT|1|0.0|ENSG00000145113|chr3:195781023-195781024|-/GTGGCGTGACCGGTGGATGCCGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATACTGAGGAAAAGCTGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGTC|inframe_insertion;REV__MUC4|p.T3519_P3520insTLPVTDTSSVSTGHATPLPVTSFSSVSTGDTTPLPVTDASSASTGHAT|1|0.0|ENSG00000145113|chr3:195781023-195781024|-/GTGGCGTGACCGGTGGATGCCGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATACTGAGGAAAAGCTGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGTC|inframe_insertion;REV__nc|ENSG00000145113|Q99102-10|MUC4;REV__nc|ENSG00000145113|Q99102-10|MUC4;REV__nc|ENSG00000145113|Q99102-10|MUC4;REV__nc|ENSG00000145113|Q99102-10|MUC4;REV__nc|ENSG00000145113|Q99102-10|MUC4;REV__nc|ENSG00000145113|Q99102-10|MUC4;REV__nc|ENSG00000145113|Q99102-10|MUC4;REV__nc|ENSG00000145113|Q99102-11|MUC4;REV__nc|ENSG00000145113|Q99102-11|MUC4;REV__nc|ENSG00000145113|Q99102-11|MUC4;REV__nc|ENSG00000145113|Q99102-11|MUC4;REV__nc|ENSG00000145113|Q99102-11|MUC4;REV__nc|ENSG00000145113|Q99102-11|MUC4;REV__nc|ENSG00000145113|Q99102-11|MUC4;REV__nc|ENSG00000145113|Q99102-15|MUC4;REV__nc|ENSG00000145113|Q99102-15|MUC4;REV__nc|ENSG00000145113|Q99102-15|MUC4;REV__nc|ENSG00000145113|Q99102-15|MUC4;REV__nc|ENSG00000145113|Q99102-15|MUC4;REV__nc|ENSG00000145113|Q99102-15|MUC4;REV__nc|ENSG00000145113|Q99102-15|MUC4;REV__nc|ENSG00000145113|Q99102-16|MUC4;REV__nc|ENSG00000145113|Q99102-16|MUC4;REV__nc|ENSG00000145113|Q99102-16|MUC4;REV__nc|ENSG00000145113|Q99102-16|MUC4;REV__nc|ENSG00000145113|Q99102-16|MUC4;REV__nc|ENSG00000145113|Q99102-16|MUC4;REV__nc|ENSG00000145113|Q99102-16|MUC4;REV__nc|ENSG00000145113|Q99102-17|MUC4;REV__nc|ENSG00000145113|Q99102-17|MUC4;REV__nc|ENSG00000145113|Q99102-17|MUC4;REV__nc|ENSG00000145113|Q99102-17|MUC4;REV__nc|ENSG00000145113|Q99102-17|MUC4;REV__nc|ENSG00000145113|Q99102-17|MUC4;REV__nc|ENSG00000145113|Q99102-17|MUC4;REV__nc|ENSG00000145113|Q99102-2|MUC4;REV__nc|ENSG00000145113|Q99102-2|MUC4;REV__nc|ENSG00000145113|Q99102-2|MUC4;REV__nc|ENSG00000145113|Q99102-2|MUC4;REV__nc|ENSG00000145113|Q99102-2|MUC4;REV__nc|ENSG00000145113|Q99102-2|MUC4;REV__nc|ENSG00000145113|Q99102-2|MUC4;REV__nc|ENSG00000145113|Q99102-3|MUC4;REV__nc|ENSG00000145113|Q99102-3|MUC4;REV__nc|ENSG00000145113|Q99102-3|MUC4;REV__nc|ENSG00000145113|Q99102-3|MUC4;REV__nc|ENSG00000145113|Q99102-3|MUC4;REV__nc|ENSG00000145113|Q99102-3|MUC4;REV__nc|ENSG00000145113|Q99102-3|MUC4;REV__nc|ENSG00000145113|Q99102-5|MUC4;REV__nc|ENSG00000145113|Q99102-5|MUC4;REV__nc|ENSG00000145113|Q99102-5|MUC4;REV__nc|ENSG00000145113|Q99102-5|MUC4;REV__nc|ENSG00000145113|Q99102-5|MUC4;REV__nc|ENSG00000145113|Q99102-5|MUC4;REV__nc|ENSG00000145113|Q99102-5|MUC4;REV__nc|ENSG00000145113|Q99102-7|MUC4;REV__nc|ENSG00000145113|Q99102-7|MUC4;REV__nc|ENSG00000145113|Q99102-7|MUC4;REV__nc|ENSG00000145113|Q99102-7|MUC4;REV__nc|ENSG00000145113|Q99102-7|MUC4;REV__nc|ENSG00000145113|Q99102-7|MUC4;REV__nc|ENSG00000145113|Q99102-7|MUC4;REV__nc|ENSG00000145113|Q99102-8|MUC4;REV__nc|ENSG00000145113|Q99102-8|MUC4;REV__nc|ENSG00000145113|Q99102-8|MUC4;REV__nc|ENSG00000145113|Q99102-8|MUC4;REV__nc|ENSG00000145113|Q99102-8|MUC4;REV__nc|ENSG00000145113|Q99102-8|MUC4;REV__nc|ENSG00000145113|Q99102-8|MUC4;REV__nc|ENSG00000145113|Q99102-9|MUC4;REV__nc|ENSG00000145113|Q99102-9|MUC4;REV__nc|ENSG00000145113|Q99102-9|MUC4;REV__nc|ENSG00000145113|Q99102-9|MUC4;REV__nc|ENSG00000145113|Q99102-9|MUC4;REV__nc|ENSG00000145113|Q99102-9|MUC4;REV__nc|ENSG00000145113|Q99102-9|MUC4	47.91560031466742	0.22105767942158736	1				NaN	NaN	0	NaN	3561	3647	7203
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7221	24.456	NaN	3129.7	30	0	550.97	0.214	+			11885	FTNEGRAL	8	54	454.23456415533536	906.4545753774707	2	454.23480224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FTNEGRAL_	ENSG00000170876|ENST00000306077|TMEM43	77.31757898189308	0.345924878368729	1				NaN	NaN	0	NaN	3569	3650	7220
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7222	24.459	NaN	3269.5	30	0	530.46	0.106			+	46982	VKNALITD	8	61	437.25492552494825	872.4952981166965	2	437.2553405761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VKNALITD_	REV__ENSG00000130943|ENST00000253255|PKDREJ;REV__PKDREJ|p.F1376Lfs*19|1|0.23|ENSG00000130943|chr22:46259195-46259195|A/-|frameshift_variant;REV__PKDREJ|p.H1268Qfs*19|1|0.09|ENSG00000130943|chr22:46259519-46259520|-/AAATC|frameshift_variant;REV__PKDREJ|p.N1646Tfs*66|1|0.36|ENSG00000130943|chr22:46258386-46258386|T/-|frameshift_variant;REV__PKDREJ|p.P1887Qfs*10|2|0.18|ENSG00000130943|chr22:46257665-46257665|A/-|frameshift_variant	60.97194046774394	0.49215940876911696	1				NaN	NaN	0	NaN	3570	3650	7220
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7223	24.461	NaN	1819.3	30	0	226.89	0.106	+			11645	FQHVGKAF	8	51	467.2500846672455	932.485616401291	2	467.2503967285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FQHVGKAF_	ENSG00000254772|ENST00000329251|EEF1G;ENST00000526409.5_1_11:62327153-62342310:-|nuORF;nc|ENSG00000254772|P26641-2|EEF1G;NCEH1-EEF1G|1|fusion	85.35947970620816	0.2915182781752196	1				NaN	NaN	0	NaN	3571	3650	7220
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7224	24.463	NaN	886.89	30	0	117.06	0.106	+			33377	RHTPRSPWA	9	43	554.2930908203125	NaN	0	554.2930908203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RHTPRSPWA_	UAP1L1|p.G228Afs*125|1|0.26|ENSG00000197355|chr9:137078984-137078984|G/-|frameshift_variant	53.351449002276354	0.18359631779194618	1				NaN	NaN	0	NaN	3572	3650	7220
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7225	24.465	NaN	2653.2	30	0	672.04	0.106	+			12625	GEIEAYKK	8	44	469.25295718554713	936.4913614378943	2	469.2529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GEIEAYKK_	CCDC40|p.I914Tfs*84|1|0.32|ENSG00000141519|chr17:80089792-80089793|-/C|frameshift_variant;CCDC40|p.K1058Nfs*21|1|0.06|ENSG00000141519|chr17:80097395-80097395|A/-|frameshift_variant;ENSG00000141519|ENST00000397545|CCDC40;ENST00000572253.5_1_17:78055330-78055681:+|nuORF;ENST00000574799.5_1_17:78022329-78073571:+|nuORF;nc|ENSG00000141519|Q4G0X9-2|CCDC40;nc|ENSG00000141519|Q4G0X9-3|CCDC40	40.5726180659479	0.6527593143185008	1				NaN	NaN	0	NaN	3573	3650	7220
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7226	24.467	NaN	1330.8	30	0	135.68	0.106	+			47323	VPAEHQVAM	9	48	491.24494065694154	980.4753283806831	2	491.2452697753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VPAEHQVAM_	ENSG00000196943|ENST00000267425|NOP9;nc|ENSG00000196943|Q86U38-2|NOP9	32.81241826257853	0.4965981579233955	1				NaN	NaN	0	NaN	3574	3650	7220
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7227	24.468	NaN	1757.1	30	0	652.66	0.035			+	41654	SVQYRRNS	8	38	505.2635983233021	1008.5126437134043	2	505.2643127441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVQYRRNS_	REV__ENSG00000158816|ENST00000289815|VWA5B1;REV__nc|ENSG00000158816|Q5TIE3-4|VWA5B1;REV__nc|ENSG00000158816|Q5TIE3-5|VWA5B1;REV__nc|ENSG00000158816|Q5TIE3|VWA5B1	30.503639358989545	0.7238069182250283	1				NaN	NaN	0	NaN	3575	3650	7220
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7237	24.49	NaN	52921	30	0	23109	0.214				-1	 	0	72	374.54464626834306	1120.6121094052291	3	374.54473876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	3582	3653	7236
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7238	24.494	NaN	4856.7	30	0	644.73	0.106	+			10731	FAEDGARTV	9	62	483.23782258919175	964.4610922451835	2	483.23736572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FAEDGARTV_	ENSG00000157240|ENST00000287934|FZD1	76.16968421966216	0.11411088698345859	1				NaN	NaN	0	NaN	3583	3653	7236
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7239	24.496	NaN	4299.9	30	0	1356.3	0.106				-1	TSLGNLSPDPM	11	47	383.1814290684282	1146.5224578054847	3	383.181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_TSLGNLSPDPM(Oxidation (M))_	ENSG00000127325|ENST00000330891|BEST3;nc|ENSG00000127325|Q8N1M1-5|BEST3;nc|ENSG00000127325|Q8N1M1-6|BEST3	30.568863376406313	0.6691487505135859	1				NaN	NaN	0	NaN	3584	3653	7236
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7240	24.497	NaN	2882.3	30	0	624.2	0.106	+			1374	AEVKERVTL	9	58	522.8056176406666	1043.596682348133	2	522.8065795898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEVKERVTL_	EIF2B5|p.L605Pfs*9|1|0.26|ENSG00000145191|chr3:184143504-184143505|-/C|frameshift_variant;ENSG00000145191|ENST00000648915|EIF2B5;ENST00000491144.5_1_3:183857994-183862728:+|nuORF;ENST00000492773.5_1_3:183859720-183860594:+|nuORF	60.11826168202944	0.21262886028301267	1				NaN	NaN	0	NaN	3585	3653	7236
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7241	24.499	NaN	2161.5	30	0	332.63	0.106	+			46404	VENIQRVAA	9	58	500.282212696571	998.549872459942	2	500.2818603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VENIQRVAA_	ENSG00000173801|ENST00000393931|JUP	36.446750945000026	0.4619375763483977	1				NaN	NaN	0	NaN	3586	3653	7236
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7242	24.501	NaN	2866.7	30	0	199.39	0.036	+			34825	RYLSKATTL	9	60	526.8085121364087	1051.6024713396173	2	526.8089599609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RYLSKATTL_	ENSG00000130177|ENST00000356221|CDC16;nc|ENSG00000130177|Q13042-2|CDC16;nc|ENSG00000130177|Q13042-3|CDC16;nc|ENSG00000130177|Q13042-4|CDC16	68.84614121027924	0.14577793175421136	1				NaN	NaN	0	NaN	3587	3653	7236
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7243	24.502	NaN	1323	30	0	418.52	0.141			+	32064	QSAAEWHRL	9	47	549.2767574919378	1096.5389620506755	2	549.7791137695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QSAAEWHRL_	REV__ENST00000547675.5_1_12:49496282-49498554:-|nuORF	28.081489160057373	0.5408112046645406	1				NaN	NaN	0	NaN	3588	3653	7236
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7251	24.523	NaN	1878.1	30	0	214.3	0.214	+			36255	SENKAQVSL	9	59	488.25872433189545	974.5028957305909	2	488.2586669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SENKAQVSL_	ENSG00000152818|ENST00000367545|UTRN;nc|ENSG00000152818|P46939-2|UTRN;UTRN|p.G3160*|1|0.03|ENSG00000152818|chr6:144821001-144821002|AG/-|frameshift_variant;UTRN|p.K1847Ffs*66|1|0.07|ENSG00000152818|chr6:144516945-144516946|-/TTTAA|frameshift_variant;UTRN|p.K951Rfs*32|2|0.22|ENSG00000152818|chr6:144461335-144461335|A/-|frameshift_variant;UTRN|p.L985Wfs*4|1|0.07|ENSG00000152818|chr6:144462753-144462754|-/GGGC|frameshift_variant;UTRN|p.R3003Pfs*5|1|0.27|ENSG00000152818|chr6:144793915-144793916|-/C|frameshift_variant;UTRN|p.T2422Hfs*35|1|0.47|ENSG00000152818|chr6:144557282-144557282|A/-|frameshift_variant	66.96192283764107	0.15557981141143568	1				NaN	NaN	0	NaN	3593	3656	7250
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7252	24.527	NaN	2414.8	30	0	561.35	0.106			+	38916	SSPQQPPQS	9	48	478.2283889183176	954.4422249034352	2	478.2278137207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSPQQPPQS_	REV__ENSG00000157625|ENST00000288422|TAB3;REV__nc|ENSG00000157625|Q8N5C8-2|TAB3;REV__TAB3|p.Y613Mfs*4|1|0.37|ENSG00000157625|chrX:30843017-30843017|A/-|frameshift_variant	45.97224482568171	0.3502073465782774	1				NaN	NaN	0	NaN	3594	3656	7250
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7253	24.529	NaN	1851.5	30	0	149.61	0.106	+			5716	AVFKGIAADK	10	61	510.29744770080305	NaN	0	510.29833984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVFKGIAADK_	ENSG00000275066|ENST00000612223|SYNRG;nc|ENSG00000275066|Q9UMZ2-3|SYNRG;nc|ENSG00000275066|Q9UMZ2-4|SYNRG;nc|ENSG00000275066|Q9UMZ2-5|SYNRG;nc|ENSG00000275066|Q9UMZ2-6|SYNRG;nc|ENSG00000275066|Q9UMZ2-7|SYNRG;nc|ENSG00000275066|Q9UMZ2-8|SYNRG;nc|ENSG00000275066|Q9UMZ2-9|SYNRG;SYNRG|p.N610Tfs*3|2|0.33|ENSG00000275066|chr17:37553894-37553894|T/-|frameshift_variant	81.52500206392136	0.09195728362689543	1				NaN	NaN	0	NaN	3595	3656	7250
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7254	24.531	NaN	2858.8	30	0	368.21	0.106	+			18796	ITSALNQL	8	53	430.24784507863535	858.4811372240707	2	430.24786376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ITSALNQL_	ENSG00000133056|ENST00000684373|PIK3C2B;PIK3C2B|p.C561Afs*18|1|0.5|ENSG00000133056|chr1:204457761-204457761|G/-|frameshift_variant	68.78682469695295	0.41700713582915416	1				NaN	NaN	0	NaN	3596	3656	7250
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7255	24.532	NaN	2101.1	30	0	250.55	0.106	+			38011	SPLPPGGKQEA	11	53	540.7885067410951	1079.5624605489902	2	540.7881469726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SPLPPGGKQEA_	ENST00000310015.10_1_2:174829909-174830263:-|nuORF	43.650786325866115	0.5079891456189096	1				NaN	NaN	0	NaN	3597	3656	7250
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7256	24.534	NaN	5911.4	30	0	3411.1	0.04				-1	MFILYVQVISL	11	38	447.9207271171574	1340.7403519516722	3	447.9205627441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_M(Oxidation (M))FILYVQVISL_	ENSG00000162753|ENST00000367714|SLC9C2;SLC9C2|p.K843Nfs*2|1|0.57|ENSG00000162753|chr1:173524080-173524080|T/-|frameshift_variant	26.063383197487333	0.7164075632144343	1				NaN	NaN	0	NaN	3598	3656	7250
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7257	24.535	NaN	2748.3	30	0	1130.4	0.142				-1	GVNRFCLSK	9	36	360.8579175253851	1079.5519231763553	3	360.8548278808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_GVNRFC(Carbamidomethyl (C))LSK_	ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;nc|ENSG00000185164|Q5JPE7-3|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2;NOMO1|p.P1102Hfs*42|1|0.36|ENSG00000103512|chr16:14886838-14886838|C/-|frameshift_variant	35.15202426646627	0.4747332964206883	1				NaN	NaN	0	NaN	3599	3656	7250
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7268	24.562	NaN	6914.6	30	0	1224.2	0.214			+	24561	LGMGLGSPGR	10	58	472.7527197100867	943.4908864869734	2	472.7525939941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LGMGLGSPGR_	REV__ENSG00000157927|ENST00000399583|RADIL;REV__ENST00000472999.5_1_7:4839011-4843599:-|nuORF;REV__nc|ENSG00000157927|Q96JH8-1|RADIL;REV__nc|ENSG00000157927|Q96JH8-2|RADIL;REV__nc|ENSG00000157927|Q96JH8-3|RADIL	39.252832667884924	0.5560298534376815	1				NaN	NaN	0	NaN	3607	3659	7267
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7269	24.566	NaN	2249.7	30	0	542.39	0.106	+			23459	LAEELGGPVHA	11	42	364.86094931728945	NaN	0	364.86090087890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LAEELGGPVHA_	ENSG00000178096|ENST00000369152|BOLA1;ENST00000476344.1_1_1:149871204-149872023:+|nuORF	31.634271133179894	0.4244354679066847	1				NaN	NaN	0	NaN	3608	3659	7267
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7270	24.567	NaN	1163	30	0	109.85	0.106			+	19529	KAVTQLVP	8	43	428.2682382130429	854.5219234928858	2	428.268310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KAVTQLVP_	REV__MYL6|p.M73V|1|0.08|ENSG00000092841|chr12:56160016-56160016|A/G|missense_variant	44.116797842482775	0.6307669463330267	1				NaN	NaN	0	NaN	3609	3659	7267
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7271	24.569	NaN	1242	30	0	319.09	0.106	+			37954	SPFFLALLMAT	11	42	605.8299316066731	1209.645310280146	2	605.8307495117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SPFFLALLMAT_	ENST00000302517.7_1_5:139063018-139063435:+|nuORF	24.519189625965996	0.7326048944360514	1				NaN	NaN	0	NaN	3610	3659	7267
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7272	24.571	NaN	1917.5	30	0	945.07	0.106	+			43528	TGTLGAVHK	9	45	442.2527381550901	NaN	0	442.2528991699219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TGTLGAVHK_	ENSG00000099785|ENST00000215555|MARCHF2;nc|ENSG00000099785|Q9P0N8-2|MARCHF2	21.9598887501803	0.3626577482100488	1				NaN	NaN	0	NaN	3611	3659	7267
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7273	24.573	NaN	1009.4	30	0	128.5	0.106			+	8993	EFSGRDTID	9	39	520.2384643554688	NaN	0	520.2384643554688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EFSGRDTID_	REV__ENSG00000134533|ENST00000256953|RERG;REV__nc|ENSG00000134533|Q96A58-2|RERG	19.1035232394073	0.3723251548669699	1				NaN	NaN	0	NaN	3612	3659	7267
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7274	24.575	NaN	1808.9	30	0	276.72	0.034				-1	KRFVCSGA	8	58	462.7397075132559	NaN	0	462.7393798828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_KRFVC(Carbamidomethyl (C))SGA_	ENST00000380877.7_1_15:50601985-50647294:-|nuORF;ENST00000543881.5_1_15:50596308-50647294:-|nuORF;ENST00000558970.2_1_15:50606818-50647294:-|nuORF;ENST00000560825.5_1_15:50601982-50647300:-|nuORF	50.0245360154114	1.7418937515398478	1				NaN	NaN	0	NaN	3613	3659	7267
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7285	24.6	NaN	7573.7	30	0	1106.1	0.214	+			41721	SVSEVVVNR	9	62	494.7748733802883	987.5351938273766	2	494.77490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSEVVVNR_	ENSG00000099821|ENST00000588649|POLRMT;ENST00000578759.1_1_17:60217316-60217976:-|nuORF	148.98678547993487	0.0071052929883181565	1				NaN	NaN	0	NaN	3621	3662	7284
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7286	24.603	NaN	11301	30	0	2539.6	0.106	+			8255	EAGAFSKLNK	10	73	532.7906287391405	1063.566704545081	2	532.7913208007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EAGAFSKLNK_	ENSG00000185985|ENST00000335565|SLITRK2;nc|ENSG00000185985|Q9H156-2|SLITRK2;SLITRK2|p.S267Vfs*23|1|0.3|ENSG00000185985|chrX:145823220-145823220|A/-|frameshift_variant	95.81516180277367	0.09778090853194907	1				NaN	NaN	0	NaN	3622	3662	7284
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7287	24.605	NaN	3755.3	30	0	632.05	0.106	+			11851	FTAPSTVGK	9	57	454.2475726506674	906.4805923681348	2	454.24786376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FTAPSTVGK_	ENSG00000140694|ENST00000437198|PARN;nc|ENSG00000140694|O95453-2|PARN;nc|ENSG00000140694|O95453-3|PARN;nc|ENSG00000140694|O95453-4|PARN	60.11826168202944	0.21262886028301267	1				NaN	NaN	0	NaN	3623	3662	7284
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7288	24.607	NaN	1525.1	30	0	202	0.106	+			23668	LASKEIHQF	9	55	536.7937665559083	NaN	0	536.7941284179688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LASKEIHQF_	ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1	47.95952297671804	0.22075498469600283	1				NaN	NaN	0	NaN	3624	3662	7284
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7289	24.609	NaN	969.34	30	0	175.36	0.106	+			45104	TVIMPVFGIA	10	44	524.2981567382812	NaN	0	524.2981567382812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TVIMPVFGIA_	ENSG00000092201|ENST00000216297|SUPT16H;ENST00000537175.1_1_12:16553488-16553881:-|nuORF;SUPT16H|p.Y764Cfs*2|1|0.36|ENSG00000092201|chr14:21359493-21359494|AT/-|frameshift_variant	22.579656572578934	0.4201028297492154	1				NaN	NaN	0	NaN	3625	3662	7284
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7290	24.611	NaN	1851	30	0	350.59	0.033	+			903	AEIASQHL	8	48	434.7295135138043	867.4444740944086	2	434.7291564941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEIASQHL_	ENSG00000173064|ENST00000682272|HECTD4;ENST00000547085.1_1_12:112600816-112607652:-|nuORF;HECTD4|p.A4187Pfs*44|1|0.07|ENSG00000173064|chr12:112163201-112163201|C/-|frameshift_variant;nc|ENSG00000173064|Q9Y4D8-4|HECTD4;nc|ENSG00000173064|Q9Y4D8|HECTD4	73.97473282117947	0.3737790450121076	1				NaN	NaN	0	NaN	3626	3662	7284
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7303	24.638	NaN	2850.5	30	0	393.31	0.214	+			36685	SGPQNASSL	9	50	430.7088013885248	859.4030498438497	2	430.7087097167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SGPQNASSL_	ENSG00000153113|ENST00000675179|CAST;nc|ENSG00000153113|P20810-10|CAST;nc|ENSG00000153113|P20810-2|CAST;nc|ENSG00000153113|P20810-3|CAST;nc|ENSG00000153113|P20810-4|CAST;nc|ENSG00000153113|P20810-5|CAST;nc|ENSG00000153113|P20810-7|CAST;nc|ENSG00000153113|P20810-8|CAST;nc|ENSG00000153113|P20810-9|CAST;nc|ENSG00000153113|P20810|CAST	70.8162118820467	0.13725933411854815	1				NaN	NaN	0	NaN	3636	3665	7302
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7304	24.642	NaN	5117.6	30	0	1248.2	0.106				-1	 	0	52	404.7188678292545	807.4231827253091	2	404.71917724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	3637	3665	7302
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7305	24.644	NaN	1358.2	30	0	162.72	0.106	+			19464	KASEVFLQR	9	47	539.3057536735205	1076.5969544138409	2	539.3067626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KASEVFLQR_	ENSG00000135372|ENST00000257829|NAT10;nc|ENSG00000135372|Q9H0A0-2|NAT10	29.170058357718403	0.5306379469863586	1				NaN	NaN	0	NaN	3638	3665	7302
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7306	24.645	NaN	1354.5	30	0	307.8	0.106	+			45988	VATLWMDK	8	51	490.25007402849195	978.4855951237839	2	490.2469787597656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_VATLWM(Oxidation (M))DK_	nc|ENSG00000157326|Q9BTZ2-3|DHRS4	45.97224482568171	0.6192535143389125	1				NaN	NaN	0	NaN	3639	3665	7302
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7307	24.647	NaN	836.67	30	0	90.668	0.106	+			47428	VPSKIQLIA	9	45	484.8105217679827	967.6064906027655	2	484.81024169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VPSKIQLIA_	ENSG00000122778|ENST00000422774|KIAA1549;KIAA1549|p.P1759Rfs*66|3|0.22|ENSG00000122778|chr7:138852241-138852241|G/-|frameshift_variant;nc|ENSG00000122778|Q9HCM3-2|KIAA1549;nc|ENSG00000122778|Q9HCM3-3|KIAA1549;nc|ENSG00000122778|Q9HCM3-4|KIAA1549	34.172542307311794	0.4838870758800184	1				NaN	NaN	0	NaN	3640	3665	7302
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7308	24.649	NaN	8522.1	30	0	1180.2	0.039	+			30257	PTALDCWDTR	10	67	412.18956452922384	1233.5468641878715	3	412.1900634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_PTALDC(Carbamidomethyl (C))WDTR_	ENST00000237536.8_2_20:35414273-35414927:-|nuORF	66.96192283764107	0.30252237217063654	1				NaN	NaN	0	NaN	3641	3665	7302
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7319	24.674	NaN	2343.4	30	0	357.99	0.214	+			16585	HGFGNVHAY	9	53	501.232725660708	1000.450898388216	2	501.2328796386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HGFGNVHAY_	ENSG00000144354|ENST00000306721|CDCA7;nc|ENSG00000144354|Q9BWT1-3|CDCA7;nc|ENSG00000144354|Q9BWT1-5|CDCA7;nc|ENSG00000144354|Q9BWT1-6|CDCA7;nc|ENSG00000144354|Q9BWT1|CDCA7	68.484700416344	0.1473408039581241	1				NaN	NaN	0	NaN	3649	3668	7318
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7320	24.678	NaN	1168	30	0	393.22	0.106				-1	 	0	34	344.2248138081803	686.4350746831606	2	344.224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	3650	3668	7318
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7321	24.68	NaN	2779.6	30	0	267.5	0.039	+			33775	RQAELAQWQK	10	49	419.89416224965714	1256.6606573491715	3	419.8946228027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RQAELAQWQK_	ENSG00000183978|ENST00000328434|COA3	106.88024417677582	0.05726438866303799	1				NaN	NaN	0	NaN	3651	3668	7318
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7330	24.701	NaN	6556.3	30	0	1923.3	0.214	+			15118	GTQTVFPSK	9	59	482.75835857369873	963.5021642141975	2	482.75836181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTQTVFPSK_	ENSG00000156463|ENST00000359120|SH3RF2;ENST00000511705.1_1_5:145435703-145442261:+|nuORF;nc|ENSG00000156463|Q8TEC5-2|SH3RF2;nc|ENSG00000156463|Q8TEC5-3|SH3RF2	72.2432373244024	0.13108886737667413	1				NaN	NaN	0	NaN	3657	3671	7329
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7331	24.705	NaN	4300.3	30	0	1517.2	0.106	+			4308	ATGKLFAVK	9	62	467.7894257469587	933.5642985607175	2	467.7894287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATGKLFAVK_	ENSG00000183049|ENST00000619168|CAMK1D;nc|ENSG00000183049|Q8IU85-2|CAMK1D	72.87924865735499	0.12833875048249987	1				NaN	NaN	0	NaN	3658	3671	7329
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7332	24.707	NaN	6754.2	30	0	1757.3	0.106	+			39935	STMGYMAAK	9	63	480.2192132601036	958.4238735870072	2	480.2195739746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STMGYMAAK_	ENSG00000080824|ENST00000216281|HSP90AA1;ENST00000436135.1_1_1:158495283-158495625:+|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1	131.03138772384656	0.014687601201650916	1				NaN	NaN	0	NaN	3659	3671	7329
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7333	24.709	NaN	2862	30	0	289.15	0.106	+			34304	RTLSDYNIQK	10	72	619.3305218600855	NaN	0	619.3304443359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RTLSDYNIQK_	ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000392399.3_1_2:137087013-137087097:-|nuORF;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000597285.1_1_19:7730614-7730836:+|nuORF;UBB|p.D191Tfs*35|2|0.18|ENSG00000170315|chr17:16382471-16382471|C/-|frameshift_variant;UBB|p.D191Tfs*35|2|0.18|ENSG00000170315|chr17:16382471-16382471|C/-|frameshift_variant	96.66504779109242	0.028658552827671036	1				NaN	NaN	0	NaN	3660	3671	7329
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7334	24.711	NaN	1633.2	30	0	418.66	0.106	+			22565	KTSNLLLSH	9	64	506.79254327704155	1011.5705336208831	2	506.79278564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KTSNLLLSH_	ENSG00000008128|ENST00000404249|CDK11A;ENSG00000248333|ENST00000341832|CDK11B;ENST00000598846.1_1_1:1635046-1639660:-|nuORF;nc|ENSG00000008128|Q9UQ88-10|CDK11A;nc|ENSG00000008128|Q9UQ88-3|CDK11A;nc|ENSG00000008128|Q9UQ88-4|CDK11A;nc|ENSG00000008128|Q9UQ88-5|CDK11A;nc|ENSG00000008128|Q9UQ88-9|CDK11A;nc|ENSG00000008128|Q9UQ88|CDK11A;nc|ENSG00000248333|P21127-10|CDK11B;nc|ENSG00000248333|P21127-12|CDK11B;nc|ENSG00000248333|P21127-3|CDK11B;nc|ENSG00000248333|P21127-4|CDK11B;nc|ENSG00000248333|P21127-5|CDK11B;nc|ENSG00000248333|P21127-6|CDK11B;nc|ENSG00000248333|P21127-8|CDK11B;nc|ENSG00000248333|P21127-9|CDK11B;nc|ENSG00000248333|P21127|CDK11B	61.691277971877994	0.19951612995419254	1				NaN	NaN	0	NaN	3661	3671	7329
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7335	24.712	NaN	1257.1	30	0	146.59	0.106	+			51092	YLSEAYFR	8	53	524.7570190429688	NaN	0	524.7570190429688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YLSEAYFR_	ENSG00000137767|ENST00000260324|SQOR	26.79610172149135	1.7418937515398478	1				NaN	NaN	0	NaN	3662	3671	7329
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7336	24.714	NaN	1328	30	0	284.5	0.035	+			33434	RIKRCQQG	8	52	494.77703857421875	NaN	0	494.77703857421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RIKRCQQG_	ENSG00000044090|ENST00000265348|CUL7;ENSG00000112659|ENST00000252050|CUL9;ENST00000515773.5_1_6:43164260-43192180:+|nuORF;nc|ENSG00000044090|Q14999-2|CUL7;nc|ENSG00000112659|Q8IWT3-3|CUL9	26.79610172149135	1.7418937515398478	1				NaN	NaN	0	NaN	3663	3671	7329
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7347	24.739	NaN	2794.5	30	0	349.12	0.214	+			39417	STDRLTVLK	9	65	516.8068008868379	1031.5990488404757	2	516.8060302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STDRLTVLK_	ENSG00000138670|ENST00000264400|RASGEF1B;nc|ENSG00000138670|Q0VAM2-2|RASGEF1B;nc|ENSG00000138670|Q0VAM2-3|RASGEF1B;RASGEF1B|p.T323Lfs*5|1|0.3|ENSG00000138670|chr4:81442338-81442338|T/-|frameshift_variant	54.343338949951054	0.26076886044970377	1				NaN	NaN	0	NaN	3671	3674	7346
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7348	24.743	NaN	1663	30	0	219.53	0.106	+			27887	MTMDRPLSH	9	61	544.2543908229969	1086.4942287127938	2	544.2553100585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MTMDRPLSH_	ENSG00000185950|ENST00000375856|IRS2	78.26377905018397	0.10505600812668463	1				NaN	NaN	0	NaN	3672	3674	7346
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7349	24.745	NaN	1724.8	30	0	264.25	0.106	+			47674	VSDSGAHVL	9	49	442.72704714255354	883.4395413519071	2	442.7270202636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSDSGAHVL_	ENSG00000064102|ENST00000261191|INTS13	88.64286706044652	0.06869153472052109	1				NaN	NaN	0	NaN	3673	3674	7346
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7350	24.747	NaN	979.75	30	0	105.38	0.106	+			15489	GVAKIIISK	9	48	464.81288906124365	927.6112251892873	2	464.81280517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GVAKIIISK_	ENSG00000125686|ENST00000300651|MED1	72.87924865735499	0.12833875048249987	1				NaN	NaN	0	NaN	3674	3674	7346
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7351	24.748	NaN	1134	30	0	160.4	0.106			+	30246	PSVGHPGRL	9	46	460.2586199577841	NaN	0	460.25830078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PSVGHPGRL_	REV__ENSG00000075826|ENST00000370345|SEC31B;REV__ENST00000484848.5_1_10:102255105-102258991:-|nuORF;REV__nc|ENSG00000075826|Q9NQW1-5|SEC31B	37.15910966729921	0.2899585034171616	1				NaN	NaN	0	NaN	3675	3674	7346
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7352	24.75	NaN	866.02	30	0	103.43	0.106	+			17084	HSAPVGAQL	9	36	440.2376708984375	NaN	0	440.2376708984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HSAPVGAQL_	ENSG00000164078|ENST00000296474|MST1R;MST1R|p.G755Vfs*19|3|0.19|ENSG00000164078|chr3:49896810-49896810|C/-|frameshift_variant;MST1R|p.S761Pfs*11|1|0.43|ENSG00000164078|chr3:49896794-49896800|ACCAGGT/-|frameshift_variant;nc|ENSG00000164078|Q04912-2|MST1R;nc|ENSG00000164078|Q04912-3|MST1R;nc|ENSG00000164078|Q04912-4|MST1R;nc|ENSG00000164078|Q04912-5|MST1R;nc|ENSG00000164078|Q04912-6|MST1R;nc|ENSG00000164078|Q04912-7|MST1R	35.61828744233558	0.29773779453147337	1				NaN	NaN	0	NaN	3676	3674	7346
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7353	24.752	NaN	4436.9	30	0	2015.2	0.035	+			20842	KIIGGKFGTS	10	56	504.29792036260096	NaN	0	504.2978210449219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KIIGGKFGTS_	ENSG00000103534|ENST00000542583|TMC5;ENST00000567478.5_1_16:19467998-19503571:+|nuORF;nc|ENSG00000103534|Q6UXY8-2|TMC5;nc|ENSG00000103534|Q6UXY8-3|TMC5;nc|ENSG00000103534|Q6UXY8-4|TMC5	40.77816245573522	0.36390427802201647	1				NaN	NaN	0	NaN	3677	3674	7346
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7365	24.778	NaN	32567	30	0	9569.5	0.214	+			41768	SVSNVVITK	9	74	473.7818079584436	945.5490629836872	2	473.78173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSNVVITK_	ENSG00000085832|ENST00000371733|EPS15;EPS15|p.R789Dfs*14|1|0.37|ENSG00000085832|chr1:51361350-51361350|T/-|frameshift_variant;nc|ENSG00000085832|P42566-2|EPS15	162.63603312974413	0.004023911058767669	1				NaN	NaN	0	NaN	3686	3677	7364
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7366	24.781	NaN	10182	30	0	4422	0.106	+			4230	ATGDMSGLLK	10	66	504.7547177560437	1007.4948825788874	2	504.75518798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_ATGDM(Oxidation (M))SGLLK_	ENSG00000127837|ENST00000248450|AAMP;ENST00000475678.5_1_2:219131145-219134809:-|nuORF;ENST00000489767.5_1_2:219130391-219134818:-|nuORF	93.5975768576971	0.11047702954938905	1				NaN	NaN	0	NaN	3687	3677	7364
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7367	24.783	NaN	845.74	30	0	145.2	0.106	+			50831	YETKITKI	8	46	498.2914733886719	NaN	0	498.2914733886719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YETKITKI_	ASAP2|p.H548Qfs*57|1|0.14|ENSG00000151693|chr2:9374842-9374842|C/-|frameshift_variant;ASAP2|p.L787Afs*16|1|0.31|ENSG00000151693|chr2:9388513-9388514|-/C|frameshift_variant;ENSG00000151693|ENST00000281419|ASAP2;nc|ENSG00000151693|O43150-2|ASAP2	36.446750945000026	1.7418937515398478	1				NaN	NaN	0	NaN	3688	3677	7364
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7368	24.785	NaN	4305.1	30	0	1367.7	0.106	+			46477	VETGVLKPG	9	52	450.26303434474414	898.5115157562883	2	450.26336669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VETGVLKPG_	ENSG00000156508|ENST00000309268|EEF1A1;ENST00000436459.2_1_9:135895553-135896258:+|nuORF;ENST00000450915.1_1_7:88268512-88269193:+|nuORF;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	82.24051045832904	0.08786059719216216	1				NaN	NaN	0	NaN	3689	3677	7364
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7369	24.787	NaN	1900.2	30	0	319.52	0.106			+	38755	SSLRAELE	8	55	452.74070767880437	903.4668624244088	2	452.7403869628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSLRAELE_	REV__ENSG00000188112|ENST00000341865|C6orf132	74.25504064058377	0.37144338840759816	1				NaN	NaN	0	NaN	3690	3677	7364
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7370	24.789	NaN	1390.1	30	0	264.48	0.033			+	24414	LGAPDPSPT	9	52	427.71596755221964	853.4173821712393	2	427.7162170410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LGAPDPSPT_	REV__ENSG00000171763|ENST00000305560|SPATA5L1;REV__nc|ENSG00000171763|Q9BVQ7-2|AFG2B;REV__nc|ENSG00000171763|Q9BVQ7-3|AFG2B;REV__SPATA5L1|p.K477Nfs*8|1|0.39|ENSG00000171763|chr15:45410524-45410524|A/-|frameshift_variant	50.0245360154114	0.3026755932229825	1				NaN	NaN	0	NaN	3691	3677	7364
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7384	24.818	NaN	6758.6	30	0	1021.2	0.214	+			24082	LEKGKETLL	9	61	515.8103252459686	1029.606097558737	2	515.811279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LEKGKETLL_	ENSG00000204592|ENST00000376630|HLA-E	117.5257442709337	0.022697614825424036	1				NaN	NaN	0	NaN	3702	3680	7383
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7385	24.821	NaN	3844	30	0	940.85	0.106	+			37886	SNYNLPMHK	9	45	368.5146243778622	NaN	0	368.514404296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SNYNLPMHK_	ENSG00000174444|ENST00000307961|RPL4;ENST00000422486.1_1_3:185135660-185136437:-|nuORF;ENST00000567229.5_1_15:66791747-66793486:-|nuORF	33.921630207806714	0.3063038642147651	1				NaN	NaN	0	NaN	3703	3680	7383
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7386	24.823	NaN	721.73	30	0	113.63	0.037	+			16942	HPNNVVSVKY	10	43	578.808614509766	1155.602676086332	2	578.8097534179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HPNNVVSVKY_	ENSG00000139116|ENST00000361418|KIF21A;ENST00000547733.1_1_12:39688228-39705384:-|nuORF;KIF21A|p.P1541Lfs*6|1|0.27|ENSG00000139116|chr12:39303074-39303074|G/-|frameshift_variant;nc|ENSG00000139116|Q7Z4S6-2|KIF21A;nc|ENSG00000139116|Q7Z4S6-3|KIF21A;nc|ENSG00000139116|Q7Z4S6-4|KIF21A;nc|ENSG00000139116|Q7Z4S6-5|KIF21A;nc|ENSG00000139116|Q7Z4S6-6|KIF21A	60.11826168202944	0.36476464221954025	1				NaN	NaN	0	NaN	3704	3680	7383
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7397	24.848	NaN	13550	30	0	2405.6	0.214	+			43216	TEVKSVEM	8	79	461.7306595004159	921.4467660676319	2	461.7307434082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEVKSVEM_	ENSG00000101210|ENST00000217182|EEF1A2;ENSG00000156508|ENST00000309268|EEF1A1;ENST00000436459.2_1_9:135895553-135896258:+|nuORF;ENST00000447052.1_1_21:24762753-24763314:+|nuORF;ENST00000547505.2_1_12:44054314-44054545:+|nuORF;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	108.08749611321984	0.24621691167378246	1				NaN	NaN	0	NaN	3712	3683	7396
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7398	24.852	NaN	2824.9	30	0	660.48	0.106			+	29759	PHTVDAGL	8	45	405.2108389479353	808.4071249626707	2	405.2110595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PHTVDAGL_	REV__AGO2|p.R688Pfs*2|1|0.33|ENSG00000123908|chr8:140539428-140539429|-/A|frameshift_variant;REV__AGO4|p.E724Kfs*16|1|0.24|ENSG00000134698|chr1:35841744-35841745|AG/-|frameshift_variant;REV__ENSG00000092847|ENST00000373204|AGO1;REV__ENSG00000123908|ENST00000220592|AGO2;REV__ENSG00000126070|ENST00000373191|AGO3;REV__ENSG00000134698|ENST00000373210|AGO4;REV__nc|ENSG00000123908|Q9UKV8-2|AGO2;REV__nc|ENSG00000126070|Q9H9G7-2|AGO3	29.841539824830324	0.7289191502596711	1				NaN	NaN	0	NaN	3713	3683	7396
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7399	24.854	NaN	3615.2	30	0	1225.4	0.037			+	-1	TGLKRCYCF	9	37	383.18412045012417	1146.5305319505726	3	383.1846008300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_TGLKRC(Carbamidomethyl (C))YCF_	REV__ENSG00000159723|ENST00000290953|AGRP	34.172542307311794	0.4838870758800184	1				NaN	NaN	0	NaN	3714	3683	7396
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7411	24.879	NaN	16098	30	0	3966.8	0.215	+			2337	AMSARAEAI	9	69	460.2366192892509	918.4586856453018	2	460.2366943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AMSARAEAI_	ENSG00000162244|ENST00000294189|RPL29;ENST00000480306.5_1_3:52027767-52028806:-|nuORF	63.53385203322761	0.18415635464017938	1				NaN	NaN	0	NaN	3723	3686	7410
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7412	24.883	NaN	2557.4	30	0	276.6	0.106	+			28541	NINLRNKP	8	56	484.7852961240108	967.5560393148216	2	484.7854309082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NINLRNKP_	ENSG00000065621|ENST00000338595|GSTO2;ENST00000477078.2_1_10:106037658-106045722:+|nuORF;nc|ENSG00000065621|Q9H4Y5-2|GSTO2;nc|ENSG00000065621|Q9H4Y5-3|GSTO2	50.0245360154114	0.5941082100236891	1				NaN	NaN	0	NaN	3724	3686	7410
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7413	24.885	NaN	1422.8	30	0	125.35	0.035	+			1369	AEVKEKVVL	9	59	507.8128521763224	1013.6111514194448	2	507.8132019042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEVKEKVVL_	ENSG00000118898|ENST00000345988|PPL;PPL|p.K1530Gfs*18|1|0.27|ENSG00000118898|chr16:4884058-4884068|GCTCGCGCTTG/-|frameshift_variant	69.6276240434122	0.14239879520340665	1				NaN	NaN	0	NaN	3725	3686	7410
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7421	24.905	NaN	2799.3	30	0	331.12	0.214			+	24498	LGIEKSKK	8	60	451.7871230105169	NaN	0	451.7868957519531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LGIEKSKK_	REV__ENSG00000196220|ENST00000383836|SRGAP3;REV__ENST00000470951.5_1_3:9101821-9290635:-|nuORF;REV__nc|ENSG00000196220|O43295-2|SRGAP3;REV__nc|ENSG00000196220|O43295-3|SRGAP3;REV__SRGAP3|p.N833Tfs*18|1|0.3|ENSG00000196220|chr3:8992966-8992966|T/-|frameshift_variant	51.33545320467046	1.7418937515398478	1				NaN	NaN	0	NaN	3730	3689	7420
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7422	24.908	NaN	5095.9	30	0	734.07	0.106	+			29603	PFSNSHNAL	9	60	493.73836125832685	985.4621695834537	2	493.7380676269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PFSNSHNAL_	ENSG00000166165|ENST00000348956|CKB;ENST00000555770.1_1_14:103988551-103989144:-|nuORF	104.0567914643314	0.03506238181059741	1				NaN	NaN	0	NaN	3731	3689	7420
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7423	24.91	NaN	6578.5	30	0	2438.4	0.106	+			1972	AIYKTPPGIQK	11	51	405.9079158456939	1214.7019181372816	3	405.9081115722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AIYKTPPGIQK_	BCOR|p.K1061Sfs*52|1|0.28|ENSG00000183337|chrX:40071029-40071029|T/-|frameshift_variant;BCOR|p.K839Qfs*5|1|0.26|ENSG00000183337|chrX:40072831-40072832|-/G|frameshift_variant;BCOR|p.K839Sfs*17|1|0.41|ENSG00000183337|chrX:40072832-40072832|G/-|frameshift_variant;BCOR|p.L1646Sfs*28|1|0.06|ENSG00000183337|chrX:40053926-40053926|G/-|frameshift_variant;BCOR|p.L487Hfs*13|1|0.67|ENSG00000183337|chrX:40073886-40073887|-/GTGT|frameshift_variant;BCOR|p.N529Tfs*60|1|0.51|ENSG00000183337|chrX:40073760-40073760|T/-|frameshift_variant;BCOR|p.P1621Qfs*53|2|0.52|ENSG00000183337|chrX:40054000-40054000|G/-|frameshift_variant;BCOR|p.R1215Kfs*30|1|0.14|ENSG00000183337|chrX:40063811-40063812|-/T|frameshift_variant;ENSG00000183337|ENST00000378444|BCOR;ENST00000490976.5_1_X:39931586-39937182:-|nuORF;nc|ENSG00000183337|Q6W2J9-2|BCOR;nc|ENSG00000183337|Q6W2J9-3|BCOR;nc|ENSG00000183337|Q6W2J9-4|BCOR	60.1669710687717	0.32196467475348695	1				NaN	NaN	0	NaN	3732	3689	7420
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7424	24.912	NaN	1466.3	30	0	304.79	0.106	+			37414	SLGLMSTLSQ	10	51	518.7707867532873	1035.5270205733746	2	518.7705688476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLGLMSTLSQ_	ENSG00000153820|ENST00000392056|SPHKAP;nc|ENSG00000153820|Q2M3C7-2|SPHKAP;SPHKAP|p.D1487*|1|0.39|ENSG00000153820|chr2:227995684-227995685|-/A|frameshift_variant	30.317721548370564	0.6322445173429027	1				NaN	NaN	0	NaN	3733	3689	7420
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7425	24.914	NaN	1035.8	30	0	132.42	0.036	+			49199	VVMVNQGLTK	10	50	552.8071509986839	1103.5997490641678	2	552.8084106445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_VVM(Oxidation (M))VNQGLTK_	ENSG00000134057|ENST00000256442|CCNB1	66.96192283764107	0.30252237217063654	1				NaN	NaN	0	NaN	3734	3689	7420
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7437	24.939	NaN	5379.3	30	0	2431.8	0.214	+			32284	QTMSDTTFK	9	53	529.7453435027603	1057.4761340723205	2	529.74609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QTMSDTTFK_	ENSG00000116489|ENST00000263168|CAPZA1;ENSG00000198898|ENST00000361183|CAPZA2;ENST00000426421.5_1_7:116544367-116557918:+|nuORF;ENST00000466066.1_1_1:113202257-113212751:+|nuORF;ENST00000565906.2_1_15:89532752-89533049:-|nuORF	45.02220120713402	0.3613509778819777	1				NaN	NaN	0	NaN	3743	3692	7436
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7438	24.943	NaN	1725.2	30	0	412.83	0.106	+			33121	RENTQTTIKL	10	57	602.3383434214687	1202.6621339097373	2	602.3391723632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RENTQTTIKL_	ENSG00000165119|ENST00000376263|HNRNPK;ENST00000485383.1_1_3:96068520-96068997:+|nuORF;nc|ENSG00000165119|P61978-3|HNRNPK;nc|ENSG00000165119|P61978|HNRNPK	61.691277971877994	0.35045824941635534	1				NaN	NaN	0	NaN	3744	3692	7436
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7439	24.945	NaN	4341	30	0	1640.5	0.106	+			21991	KSFDTSLIRK	10	45	398.8994655187413	1193.676567156424	3	398.89990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KSFDTSLIRK_	ENSG00000182220|ENST00000636580|ATP6AP2;nc|ENSG00000182220|O75787-2|ATP6AP2	59.93077597824379	0.36646980200755325	1				NaN	NaN	0	NaN	3745	3692	7436
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7440	24.947	NaN	1497	30	0	379.2	0.106			+	50567	YAVLLILE	8	56	467.2857347160571	NaN	0	467.2855224609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YAVLLILE_	REV__ENST00000481451.1_1_10:124172484-124175387:+|nuORF	39.021493756699265	1.7418937515398478	1				NaN	NaN	0	NaN	3746	3692	7436
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7441	24.949	NaN	1866.6	30	0	209.02	0.106			+	16170	HEAIFLFH	8	60	507.2622568440241	NaN	0	507.26226806640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HEAIFLFH_	REV__ENSG00000060642|ENST00000674202|PIGV	62.97842346883844	1.7418937515398478	1				NaN	NaN	0	NaN	3747	3692	7436
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7442	24.95	NaN	3209.8	30	0	854.61	0.037			+	21810	KRCSLCIGKK	10	47	379.220394353687	1134.639353661261	3	379.2209167480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KRCSLCIGKK_	REV__ENSG00000101670|ENST00000261292|LIPG;REV__nc|ENSG00000101670|Q9Y5X9-2|LIPG	37.50817390946774	0.5721060100277453	1				NaN	NaN	0	NaN	3748	3692	7436
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7443	24.951	NaN	1346.3	30	0	146.65	0.141	+			30531	QAIVDEALVL	10	52	535.8088655824452	1069.6031782316902	2	536.3119506835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QAIVDEALVL_	CABIN1|p.G242V|1|0.1|ENSG00000099991|chr22:24050893-24050893|G/T|missense_variant	45.02220120713402	0.5028680121232791	1				NaN	NaN	0	NaN	3749	3692	7436
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7452	24.973	NaN	8233.7	30	0	1631	0.214			+	24624	LGSGLGRLA	9	56	422.25566399527213	842.4967750573443	2	422.2562255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LGSGLGRLA_	REV__ENSG00000151503|ENST00000534548|NCAPD3;REV__NCAPD3|p.A322Lfs*24|1|0.31|ENSG00000151503|chr11:134206654-134206654|G/-|frameshift_variant;REV__NCAPD3|p.S1143Ffs*5|1|0.35|ENSG00000151503|chr11:134168141-134168142|-/A|frameshift_variant	84.9155231211612	0.07920012719736333	1				NaN	NaN	0	NaN	3755	3695	7451
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7453	24.976	NaN	2397	30	0	313.38	0.106			+	12905	GESGESSGPP	10	50	452.18941394258854	902.3642749519771	2	452.1898498535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GESGESSGPP_	REV__ENSG00000076650|ENST00000170564|GPATCH1	40.77816245573522	0.5419747034533848	1				NaN	NaN	0	NaN	3756	3695	7451
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7454	24.978	NaN	2824	30	0	669.52	0.106	+			39326	STAVGLVTK	9	60	438.26326274978675	874.5119725663735	2	438.2635803222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STAVGLVTK_	ASH1L|p.H1793Ifs*7|1|0.13|ENSG00000116539|chr1:155438778-155438778|G/-|frameshift_variant;ASH1L|p.I970Lfs*9|1|0.2|ENSG00000116539|chr1:155479962-155479962|T/-|frameshift_variant;ASH1L|p.K1222Rfs*11|4|0.27|ENSG00000116539|chr1:155479205-155479205|T/-|frameshift_variant;ASH1L|p.K1533Sfs*17|1|0.25|ENSG00000116539|chr1:155478272-155478272|T/-|frameshift_variant;ASH1L|p.K2377Nfs*5|1|0.28|ENSG00000116539|chr1:155354570-155354570|T/-|frameshift_variant;ASH1L|p.N1822Tfs*2|1|0.33|ENSG00000116539|chr1:155438690-155438690|T/-|frameshift_variant;ASH1L|p.R712Efs*23|3|0.35|ENSG00000116539|chr1:155480736-155480736|T/-|frameshift_variant;ASH1L|p.S2309Ifs*11|1|0.64|ENSG00000116539|chr1:155357635-155357636|-/T|frameshift_variant;ENSG00000116539|ENST00000392403|ASH1L;nc|ENSG00000116539|Q9NR48|ASH1L	107.00750918261382	0.032051501805654005	1				NaN	NaN	0	NaN	3757	3695	7451
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7455	24.98	NaN	1658.9	30	0	508.71	0.106			+	47477	VQCISCVYL	9	45	514.2509721845231	1026.4873914358461	2	514.25244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VQCISCVYL_	REV__ENSG00000136878|ENST00000372429|USP20	23.04248740728303	0.5879033540491928	1				NaN	NaN	0	NaN	3758	3695	7451
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7456	24.982	NaN	3707.4	30	0	820.64	0.036	+			3243	ASLELPAAKK	10	43	343.209699977735	1026.607270533405	3	343.2101135253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASLELPAAKK_	ENSG00000110172|ENST00000320585|CHORDC1;nc|ENSG00000110172|Q9UHD1-2|CHORDC1	32.81241826257853	0.6118718159329168	1				NaN	NaN	0	NaN	3759	3695	7451
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7469	25.009	NaN	2366.7	30	0	224.75	0.214			+	16440	HESLRKLEA	9	61	541.8018225257774	1081.5890921183548	2	541.80224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HESLRKLEA_	REV__ENSG00000162654|ENST00000355754|GBP4	39.252832667884924	0.4290233611298554	1				NaN	NaN	0	NaN	3769	3698	7468
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7470	25.013	NaN	3118.2	30	0	722.02	0.106			+	-1	KVESLFMMT	9	53	551.2707471708031	1100.5269414084062	2	551.2708129882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_KVESLFMM(Oxidation (M))T_	REV__ENSG00000113300|ENST00000261951|CNOT6	30.503639358989545	0.5181749237905803	1				NaN	NaN	0	NaN	3770	3698	7468
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7471	25.015	NaN	4791.1	30	0	1488	0.106	+			43179	TETTKFEKL	9	49	366.2008171375178	1095.5806220127533	3	366.20068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TETTKFEKL_	CC2D1A|p.G898Vfs*45|1|0.32|ENSG00000132024|chr19:13929638-13929638|G/-|frameshift_variant;ENSG00000132024|ENST00000318003|CC2D1A;ENST00000589138.5_1_19:14029331-14037891:+|nuORF;ENST00000589224.1_1_19:14034393-14038165:+|nuORF;nc|ENSG00000132024|Q6P1N0-2|CC2D1A	25.57405402267927	0.5642445186134241	1				NaN	NaN	0	NaN	3771	3698	7468
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7472	25.017	NaN	1360.8	30	0	200.36	0.106	+			50703	YEERVQAV	8	52	497.2540283203125	NaN	0	497.2540283203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YEERVQAV_	ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1;SPTBN1|p.K503Rfs*24|1|0.06|ENSG00000115306|chr2:54626095-54626095|G/-|frameshift_variant	40.77816245573522	1.7418937515398478	1				NaN	NaN	0	NaN	3772	3698	7468
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7473	25.018	NaN	512.2	30	0	58.831	0.036	+			26961	LYIVFIFAM	9	42	558.8111572265625	NaN	0	558.8111572265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LYIVFIFAM_	ENSG00000111700|ENST00000381545|SLCO1B3	29.841539824830324	0.32690339240668626	1				NaN	NaN	0	NaN	3773	3698	7468
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7483	25.04	NaN	3243.7	30	0	566.49	0.214	+			26386	LTEAPLNPK	9	63	491.7819474055828	981.5493418779656	2	491.7814025878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LTEAPLNPK_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000403258.1_1_6:88986231-88986483:-|nuORF;ENST00000446382.2_1_9:6834760-6835018:+|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000502306.1_1_5:15450853-15451165:+|nuORF;ENST00000567299.1_1_19:9629420-9629708:+|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;nc|ENSG00000204434|Q9BYX7|POTEKP	104.74654710444128	0.034358562718640136	1				NaN	NaN	0	NaN	3780	3701	7482
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7484	25.044	NaN	1097.8	30	0	146.01	0.106			+	24397	LGAASVAVV	9	37	393.7395935058594	NaN	0	393.7395935058594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LGAASVAVV_	REV__ENSG00000163958|ENST00000296326|ZDHHC19;REV__ENST00000465519.5_1_3:195925313-195934370:-|nuORF;REV__nc|ENSG00000163958|Q8WVZ1-2|ZDHHC19;REV__nc|ENSG00000163958|Q8WVZ1-3|ZDHHC19	35.200714571348534	0.2998460331538257	1				NaN	NaN	0	NaN	3781	3701	7482
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7485	25.046	NaN	1176.6	30	0	109.93	0.106	+			51352	YSVVSGNLMI	10	58	541.7840423250265	NaN	0	541.7835083007812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YSVVSGNLMI_	ENSG00000204642|ENST00000259951|HLA-F	35.61828744233558	0.3832230071539346	1				NaN	NaN	0	NaN	3782	3701	7482
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7486	25.048	NaN	1232.9	30	0	103.34	0.034	+			11057	FEQKAAQL	8	47	467.7533570113874	NaN	0	467.75347900390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FEQKAAQL_	EEA1|p.K257Nfs*13|2|0.34|ENSG00000102189|chr12:92851138-92851138|T/-|frameshift_variant;EEA1|p.N1389Mfs*3|1|0.33|ENSG00000102189|chr12:92776081-92776081|T/-|frameshift_variant;ENSG00000102189|ENST00000322349|EEA1	51.33545320467046	1.7418937515398478	1				NaN	NaN	0	NaN	3783	3701	7482
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7497	25.071	NaN	1790.1	30	0	524.8	0.214	+			45722	VAASRVGLA	9	45	422.25566399527213	842.4967750573443	2	423.25848388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VAASRVGLA_	ENST00000517894.5_3_8:143558624-143561092:+|nuORF	55.50420428727701	0.2510918378945873	1				NaN	NaN	0	NaN	3791	3704	7496
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7498	25.075	NaN	4261.1	30	0	601.42	0.106	+			26267	LSTATKDTY	9	61	500.2549990802012	998.4954452272024	2	501.261962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSTATKDTY_	ENSG00000198821|ENST00000362089|CD247;ENST00000470379.1_1_1:167400920-167408655:-|nuORF;ENST00000476733.5_1_1:167400920-167408655:-|nuORF;ENST00000483825.5_1_1:167400920-167403349:-|nuORF;nc|ENSG00000198821|P20963-3|CD247	21.9598887501803	0.5980208138527809	1				NaN	NaN	0	NaN	3792	3704	7496
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7499	25.077	NaN	1239.8	30	0	145.18	0.106			+	-1	EVCVAINR	8	47	480.7505850153324	NaN	0	480.7502136230469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_EVC(Carbamidomethyl (C))VAINR_	REV__ENSG00000147251|ENST00000276202|DOCK11	33.51558372728122	1.7418937515398478	1				NaN	NaN	0	NaN	3793	3704	7496
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7500	25.078	NaN	1469.3	30	0	207.52	0.106	+			26289	LSTTSVPR	8	44	430.74571419881994	NaN	0	430.74578857421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSTTSVPR_	ENSG00000205495|ENST00000380370|OR52J3	58.78195531508484	1.7418937515398478	1				NaN	NaN	0	NaN	3794	3704	7496
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7501	25.08	NaN	1532.4	30	0	215.42	0.106	+			5895	AVLCSTMEK	9	50	519.7516933660124	1037.4888337988248	2	519.7527465820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_AVLC(Carbamidomethyl (C))STMEK_	ENSG00000065268|ENST00000585809|WDR18	64.20726635412375	0.17854274437659667	1				NaN	NaN	0	NaN	3795	3704	7496
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7502	25.082	NaN	970.04	30	0	133.47	0.036	+			1705	AGVGAVPGWPR	11	52	533.7944693850461	NaN	0	533.7940673828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AGVGAVPGWPR_	ENST00000586702.1_1_19:11313124-11313960:-|nuORF	35.61828744233558	0.4066803947888518	1				NaN	NaN	0	NaN	3796	3704	7496
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7512	25.106	NaN	4420.3	30	0	590.22	0.214	+			23852	LDDFLLTY	8	63	500.2549990802012	998.4954452272024	2	500.2536926269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LDDFLLTY_	ENSG00000136237|ENST00000665637|RAPGEF5;nc|ENSG00000136237|Q92565-2|RAPGEF5;nc|ENSG00000136237|Q92565|RAPGEF5	57.81127852772723	0.5234495074909924	1				NaN	NaN	0	NaN	3803	3707	7511
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7513	25.109	NaN	2666.7	30	0	378.4	0.106	+			39545	STFSTNYR	8	58	488.22984449003314	974.4451360468663	2	488.2303466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STFSTNYR_	ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53342924-53344195:+|nuORF	51.33545320467046	0.5859736979383976	1				NaN	NaN	0	NaN	3804	3707	7511
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7514	25.111	NaN	2376.6	30	0	361.92	0.106	+			15315	GTVIHFNNPK	10	57	563.8034708982391	1125.592388863278	2	563.8046264648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTVIHFNNPK_	ENSG00000134717|ENST00000313334|BTF3L4;ENSG00000145741|ENST00000380591|BTF3;nc|ENSG00000134717|Q96K17-2|BTF3L4;nc|ENSG00000145741|P20290-2|BTF3	87.69643885390035	0.14426223466775756	1				NaN	NaN	0	NaN	3805	3707	7511
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7515	25.113	NaN	2357.1	30	0	351.08	0.106	+			15457	GTYVSSVPR	9	48	483.25553508072437	964.4965172282488	2	483.2568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTYVSSVPR_	ENSG00000204252|ENST00000229829|HLA-DOA;ENST00000485901.1_1_6:32974617-32975137:-|nuORF	77.31757898189308	0.1091473830098891	1				NaN	NaN	0	NaN	3806	3707	7511
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7516	25.115	NaN	1399.8	30	0	261.3	0.035			+	48515	VTNGVTGVVF	10	46	496.77404558824963	991.5335382432993	2	496.7735595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTNGVTGVVF_	REV__ENSG00000101188|ENST00000370501|NTSR1	37.81151784470057	0.569310847604193	1				NaN	NaN	0	NaN	3807	3707	7511
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7526	25.138	NaN	1657.7	30	0	337.14	0.214	+			15077	GTPRTLNTVF	10	54	553.3036633137805	1104.5927736943609	2	553.3037719726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTPRTLNTVF_	ARHGEF12|p.G1290Afs*71|1|0.09|ENSG00000196914|chr11:120480061-120480062|-/CTGCAAGAATTAAATTA|frameshift_variant;ENSG00000196914|ENST00000397843|ARHGEF12;ENST00000529970.5_1_11:120278459-120348246:+|nuORF;nc|ENSG00000196914|Q9NZN5-2|ARHGEF12	50.033510581677724	0.4566913063131936	1				NaN	NaN	0	NaN	3814	3710	7525
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7527	25.142	NaN	1876	30	0	220.41	0.106	+			40794	SVDRSLLL	8	56	451.7686117986552	NaN	0	451.7687072753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVDRSLLL_	CDK5R1|p.R179H|1|0.29|ENSG00000176749|chr17:32488156-32488156|G/A|missense_variant;ENSG00000176749|ENST00000313401|CDK5R1	44.116797842482775	1.7418937515398478	1				NaN	NaN	0	NaN	3815	3710	7525
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7528	25.144	NaN	2698.4	30	0	936.4	0.106			+	51284	YRYLVLTP	8	34	342.1987806410229	1023.5745125232687	3	342.19879150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YRYLVLTP_	REV__ENST00000360639.6_1_15:75498583-75498691:+|nuORF	13.775330524044264	0.789990904165365	1				NaN	NaN	0	NaN	3816	3710	7525
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7529	25.145	NaN	2282	30	0	244.1	0.106	+			10457	EVNPNTRVM	9	56	530.2661984094817	1058.5178438857633	2	530.26708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EVNPNTRVM_	ENSG00000123353|ENST00000243045|ORMDL2;ENSG00000128699|ENST00000392349|ORMDL1;ENSG00000172057|ENST00000304046|ORMDL3;nc|ENSG00000172057|Q8N138-4|ORMDL3	39.252832667884924	0.4290233611298554	1				NaN	NaN	0	NaN	3817	3710	7525
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7530	25.147	NaN	1724.9	30	0	373.12	0.036			+	-1	TEMNAMANPT	10	50	548.2275758397124	1094.4405987462246	2	548.729248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_TEM(Oxidation (M))NAMANPT_	REV__tr|U7STD6|U7STD6_FUSNUSodium/glutamatesymporterOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01373PE=3SV=1	47.657333605630114	0.47858658696240314	1				NaN	NaN	0	NaN	3818	3710	7525
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7540	25.171	NaN	6458.5	30	0	1513.7	0.214				-1	 	0	59	469.27653292240944	936.5385129116189	2	469.2767028808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	3825	3713	7539
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7541	25.174	NaN	4288	30	0	922.36	0.106	+			39096	SSSTVSYLK	9	67	486.25546138430195	970.4963698354039	2	486.25555419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSSTVSYLK_	ABCA1|p.L2013*|1|0.14|ENSG00000165029|chr9:104788457-104788457|A/-|frameshift_variant;ENSG00000165029|ENST00000374736|ABCA1	80.45461616416974	0.09558281504443908	1				NaN	NaN	0	NaN	3826	3713	7539
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7542	25.176	NaN	2136	30	0	192.78	0.106			+	14269	GSVALEVPTK	10	58	500.787224575827	999.559896218454	2	500.78717041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GSVALEVPTK_	REV__ENSG00000139405|ENST00000548278|RITA1;REV__nc|ENSG00000139405|Q96K30-2|RITA1;REV__nc|ENSG00000139405|Q96K30-3|RITA1;REV__RITA1|p.D133Mfs*62|1|0.07|ENSG00000139405|chr12:113191400-113191400|G/-|frameshift_variant	29.170058357718403	0.6416167986984785	1				NaN	NaN	0	NaN	3827	3713	7539
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7543	25.178	NaN	1813.4	30	0	219.69	0.106			+	24300	LFDESPRY	8	57	513.7497045889131	NaN	0	513.749755859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LFDESPRY_	REV__ENST00000354393.6_1_10:69866438-69902705:+|nuORF	40.5726180659479	1.7418937515398478	1				NaN	NaN	0	NaN	3828	3713	7539
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7544	25.18	NaN	1366.8	30	0	183.21	0.106			+	-1	NITMSSLM	8	51	464.71122485948626	NaN	0	464.7109680175781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Oxidation (M)	_NITM(Oxidation (M))SSLM(Oxidation (M))_	REV__ENST00000547237.1_1_14:25900667-25900754:-|nuORF	57.81127852772723	1.7418937515398478	1				NaN	NaN	0	NaN	3829	3713	7539
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7545	25.181	NaN	1176.3	30	0	168.92	0.034				-1	GLAKALQMA	9	50	459.75673430605536	917.4989156789107	2	459.757080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_GLAKALQM(Oxidation (M))A_	tr|U7T206|U7T206_FUSNUCysteinedesulfuraseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00795PE=3SV=1	53.351449002276354	0.2690372970092375	1				NaN	NaN	0	NaN	3830	3713	7539
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7557	25.207	NaN	13612	30	0	1195.3	0.214			+	-1	MAMLPALGI	9	69	474.74815500304436	947.4817570728887	2	474.7481689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_M(Oxidation (M))AM(Oxidation (M))LPALGI_	REV__ADAM19|p.P794Lfs*18|1|0.07|ENSG00000135074|chr5:157488434-157488434|G/-|frameshift_variant;REV__ENSG00000135074|ENST00000257527|ADAM19;REV__ENST00000517951.5_1_5:156822576-156936463:-|nuORF;REV__nc|ENSG00000135074|Q9H013|ADAM19	49.21078951299608	0.3122205139198386	1				NaN	NaN	0	NaN	3839	3716	7556
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7558	25.211	NaN	9370.3	30	0	1532.9	0.106	+			48459	VTLHTSFQK	9	71	530.7926270722097	1059.5707012112193	2	530.7930297851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTLHTSFQK_	ENST00000532746.5_2_16:2012101-2013785:-|nuORF	49.44154591367651	0.3095138337212152	1				NaN	NaN	0	NaN	3840	3716	7556
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7559	25.212	NaN	4022.8	30	0	279.49	0.106	+			43222	TEVLKTHGL	9	69	499.2871514386609	996.5597499441218	2	499.2870788574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TEVLKTHGL_	ENSG00000142541|ENST00000391857|RPL13A	83.6470233535746	0.08277643980271215	1				NaN	NaN	0	NaN	3841	3716	7556
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7560	25.214	NaN	5755.7	30	0	2248.6	0.106	+			4283	ATGGTFVVK	9	61	440.2499132381125	878.4852735430251	2	440.2499084472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATGGTFVVK_	ENSG00000198208|ENST00000557413|RPS6KL1;ENST00000555834.5_1_14:75375979-75389943:-|nuORF;nc|ENSG00000198208|Q9Y6S9-2|RPS6KL1;nc|ENSG00000198208|Q9Y6S9-4|RPS6KL1	67.49366992349736	0.1516260258713357	1				NaN	NaN	0	NaN	3842	3716	7556
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7561	25.216	NaN	1251.3	30	0	350.46	0.106	+			2522	APVKPGPAL	9	43	425.2628205609707	848.5110881887414	2	425.2628173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_APVKPGPAL_	ENSG00000050165|ENST00000683431|DKK3;ENST00000526218.5_1_11:12000483-12031257:-|nuORF;ENST00000530694.5_1_11:12023362-12031257:-|nuORF;ENST00000533900.1_1_11:12023572-12030129:-|nuORF;ENST00000534479.5_1_11:12023699-12030797:-|nuORF	52.29916861842294	0.2778091507991977	1				NaN	NaN	0	NaN	3843	3716	7556
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7562	25.218	NaN	2579.4	30	0	335.68	0.036	+			38826	SSNDWNVEK	9	58	539.743309880855	1077.47206682851	2	539.7448120117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSNDWNVEK_	ENSG00000151348|ENST00000533608|EXT2;EXT2|p.D82Ifs*30|1|0.43|ENSG00000151348|chr11:44107951-44107951|G/-|frameshift_variant;EXT2|p.N517Tfs*3|1|0.49|ENSG00000151348|chr11:44206844-44206844|A/-|frameshift_variant;nc|ENSG00000151348|Q93063-2|EXT2;nc|ENSG00000151348|Q93063-3|EXT2	112.2953585152457	0.026655838328212944	1				NaN	NaN	0	NaN	3844	3716	7556
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7563	25.219	NaN	1877.5	30	0	227.98	0.139			+	18413	ISADKKDL	8	56	445.2530064185687	888.4914599039374	2	445.2529602050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ISADKKDL_	REV__ENSG00000197965|ENST00000359523|MPZL1;REV__ENST00000465787.5_1_1:167691238-167742606:+|nuORF;REV__ENST00000474729.5_1_1:167734818-167757155:+|nuORF;REV__MPZL1|p.I122V|1|0.43|ENSG00000197965|chr1:167772380-167772380|A/G|missense_variant;REV__nc|ENSG00000197965|O95297-2|MPZL1;REV__nc|ENSG00000197965|O95297-3|MPZL1	56.72105179125745	0.5342425954139568	1				NaN	NaN	0	NaN	3845	3716	7556
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7576	25.248	NaN	11171	30	0	1665.1	0.214			+	17081	HRTSKCHNT	9	62	542.2598910608872	1082.5052291885743	2	542.2614135742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HRTSKCHNT_	REV__ENSG00000075292|ENST00000264447|ZNF638;REV__ENST00000460310.1_1_2:71658536-71660440:+|nuORF;REV__nc|ENSG00000075292|Q14966-3|ZNF638;REV__nc|ENSG00000075292|Q14966-5|ZNF638	47.657333605630114	0.33044192980041115	1				NaN	NaN	0	NaN	3855	3719	7575
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7577	25.251	NaN	2918.8	30	0	1245.7	0.106			+	45289	TVRHLKGGY	9	52	515.7925960304896	1029.570639127779	2	515.7925415039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVRHLKGGY_	REV__ENSG00000144909|ENST00000296220|OSBPL11	38.80614096846853	0.43426287593479557	1				NaN	NaN	0	NaN	3856	3719	7575
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7578	25.253	NaN	5799.1	30	0	601.61	0.106	+			40009	STMSTNGIPR	10	62	532.2632963248061	1062.5120397164121	2	532.2638549804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STMSTNGIPR_	ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF	112.10723106719422	0.0417416748461292	1				NaN	NaN	0	NaN	3857	3719	7575
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7579	25.255	NaN	1382.6	30	0	240.29	0.106			+	2722	AQTIEKTY	8	50	477.25052278210626	NaN	0	477.2506103515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AQTIEKTY_	REV__tr|U7SU65|U7SU65_FUSNUHomoserinedehydrogenaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01320PE=3SV=1	68.78682469695295	1.7418937515398478	1				NaN	NaN	0	NaN	3858	3719	7575
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7580	25.257	NaN	5829.3	30	0	584.72	0.106	+			34690	RVTPFILKK	9	67	367.9094198253356	1100.7064300762067	3	367.9095764160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RVTPFILKK_	ENSG00000175768|ENST00000321301|TOMM5;ENST00000354833.7_1_5:70213930-70214023:+|nuORF	90.60085204095205	0.06317133949006545	1				NaN	NaN	0	NaN	3859	3719	7575
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7581	25.259	NaN	1513	30	0	460.31	0.106	+			29883	PLLAAGLH	8	40	396.2422103961049	790.4698678590098	2	396.2422790527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PLLAAGLH_	ENST00000426077.2_1_2:120980139-120980361:-|nuORF	24.504012794735996	0.7701314986472447	1				NaN	NaN	0	NaN	3860	3719	7575
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7582	25.26	NaN	1048.5	30	0	309.37	0.036	+			13337	GKQLGEENSQ	10	50	545.2613569440252	NaN	0	545.2613525390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GKQLGEENSQ_	ENST00000393179.8_1_12:89885842-89919131:-|nuORF	35.15202426646627	0.38475398474706135	1				NaN	NaN	0	NaN	3861	3719	7575
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7593	25.286	NaN	5214.1	30	0	660.4	0.214	+			30705	QDELLYAR	8	70	504.26078794756046	1006.5070229619209	2	504.26202392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QDELLYAR_	ENSG00000186648|ENST00000342740|CARMIL3;ENST00000559694.5_1_14:24526437-24530034:+|nuORF;nc|ENSG00000186648|Q8ND23-3|CARMIL3	82.7504851949679	0.3006553482314138	1				NaN	NaN	0	NaN	3869	3722	7592
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7594	25.289	NaN	3209.7	30	0	1288.8	0.106	+			40125	STPVAREL	8	45	436.7451356279928	871.4757183227856	2	436.7453308105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STPVAREL_	ENSG00000058600|ENST00000299853|POLR3E;ENST00000564061.5_1_16:22308800-22337695:+|nuORF;nc|ENSG00000058600|Q9NVU0-2|POLR3E;nc|ENSG00000058600|Q9NVU0-3|POLR3E;nc|ENSG00000058600|Q9NVU0-4|POLR3E;nc|ENSG00000058600|Q9NVU0-5|POLR3E;POLR3E|p.G595Afs*51|1|0.33|ENSG00000058600|chr16:22326189-22326189|C/-|frameshift_variant	30.317721548370564	0.7252424349988982	1				NaN	NaN	0	NaN	3870	3722	7592
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7595	25.291	NaN	3870.9	30	0	499.93	0.106				-1	 	0	63	458.2606834667888	914.5068140003776	2	458.2603759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	3871	3722	7592
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7596	25.293	NaN	1946.3	30	0	177.19	0.106	+			51238	YQEKGVRVL	9	67	546.3131454017374	1090.6117378702747	2	546.31396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YQEKGVRVL_	ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2	62.107414245175825	0.1960472003779324	1				NaN	NaN	0	NaN	3872	3722	7592
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7597	25.295	NaN	751.6	30	0	362.65	0.106			+	31618	QMATYLVSSTD	11	23	608.2814637325247	1214.5483745318493	2	608.2821655273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QMATYLVSSTD_	REV__PDGFRB|p.V1012M|1|0.23|ENSG00000113721|chr5:150117721-150117721|C/T|missense_variant	24.519189625965996	0.7326048944360514	1				NaN	NaN	0	NaN	3873	3722	7592
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7598	25.296	NaN	1649.1	30	0	200.18	0.106	+			34692	RVTPFILKK	9	54	551.3605231211474	1100.7064933090946	2	551.3605346679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RVTPFILKK_	ENSG00000175768|ENST00000321301|TOMM5;ENST00000354833.7_1_5:70213930-70214023:+|nuORF	49.536043120802724	0.308405419312776	1				NaN	NaN	0	NaN	3874	3722	7592
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7599	25.298	NaN	1463.9	30	0	316.74	0.032	+			38415	SSAGPGLLK	9	48	415.24219004739814	828.4698271615963	2	415.2430114746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSAGPGLLK_	CON__P08729;CON__Q3KNV1;ENSG00000135480|ENST00000331817|KRT7;ENST00000549638.1_1_12:52641943-52642541:+|nuORF;ENST00000550153.1_1_12:52641566-52642541:+|nuORF;ENST00000552322.5_1_12:52638288-52642544:+|nuORF	58.78195531508484	0.22376836668196862	1				NaN	NaN	0	NaN	3875	3722	7592
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7608	25.32	NaN	2902.2	30	0	444.06	0.214	+			18554	ISNGSALVV	9	53	430.2476213016583	858.4806896701166	2	430.2477722167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ISNGSALVV_	ENSG00000133107|ENST00000379705|TRPC4;nc|ENSG00000133107|Q9UBN4-5|TRPC4;nc|ENSG00000133107|Q9UBN4-6|TRPC4	54.776311868738084	0.25715957988447635	1				NaN	NaN	0	NaN	3881	3725	7607
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7609	25.323	NaN	2546.2	30	0	424.75	0.106			+	36951	SILPASRRV	9	59	499.80855791954355	997.6025629058871	2	499.8087158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SILPASRRV_	REV__ENST00000258105.7_1_2:74699535-74699574:-|nuORF	29.170058357718403	0.5306379469863586	1				NaN	NaN	0	NaN	3882	3725	7607
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7610	25.325	NaN	1907.1	30	0	390.76	0.106	+			44665	TTGLSAWVTG	10	61	496.75703417300303	991.4995154128061	2	496.75665283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TTGLSAWVTG_	ENSG00000205592|ENST00000454784|MUC19;nc|ENSG00000205592|Q7Z5P9-2|MUC19	56.72105179125745	0.3956618550748046	1				NaN	NaN	0	NaN	3883	3725	7607
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7611	25.327	NaN	1833.3	30	0	215.07	0.106			+	32625	QYRIPGLK	8	55	487.79260446189534	973.5706559905907	2	487.7924499511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QYRIPGLK_	REV__ENSG00000081800|ENST00000194130|SLC13A1;REV__SLC13A1|p.N460Rfs*6|1|0.06|ENSG00000081800|chr7:123119214-123119215|-/CCCCTTTTTACTC|frameshift_variant	33.51558372728122	0.7005509609380386	1				NaN	NaN	0	NaN	3884	3725	7607
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7612	25.329	NaN	1017.9	30	0	637.91	0.106	+			2087	ALENKGSPRA	10	29	348.19378729700657	1041.5595324912197	3	348.1938171386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ALENKGSPRA_	ENST00000342963.2_1_7:5459979-5460210:+|nuORF	19.996771675451527	0.7148376616046445	1				NaN	NaN	0	NaN	3885	3725	7607
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7613	25.331	NaN	1183.2	30	0	177.86	0.106			+	50099	WGRGCVLV	8	54	445.23974609375	NaN	0	445.23974609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_WGRGCVLV_	REV__ENST00000313213.4_1_2:24345404-24346289:-|nuORF;REV__ENST00000436622.1_1_2:24345702-24346289:-|nuORF	37.028477286268924	1.7418937515398478	1				NaN	NaN	0	NaN	3886	3725	7607
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7614	25.332	NaN	1001	30	0	115.9	0.035	+			44501	TSSPLSQNDS	10	55	518.2359938117283	NaN	0	518.2360229492188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TSSPLSQNDS_	ENSG00000064999|ENST00000360359|ANKS1A	44.377184641726394	0.34115073642966565	1				NaN	NaN	0	NaN	3887	3725	7607
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7633	25.381	NaN	1843.8	30	0	217.91	0.214	+			20275	KENQVIVRM	9	61	558.8129028538992	1115.6112527745984	2	558.8137817382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KENQVIVRM_	ENSG00000104413|ENST00000433389|ESRP1;ESRP1|p.L333Sfs*55|1|0.35|ENSG00000104413|chr8:94668009-94668009|G/-|frameshift_variant;ESRP1|p.N512Hfs*7|2|0.33|ENSG00000104413|chr8:94674383-94674384|AA/-|frameshift_variant;ESRP1|p.N512Kfs*8|1|0.48|ENSG00000104413|chr8:94674382-94674383|-/A|frameshift_variant;ESRP1|p.N512Tfs*2|2|0.36|ENSG00000104413|chr8:94674383-94674383|A/-|frameshift_variant;nc|ENSG00000104413|Q6NXG1-2|ESRP1;nc|ENSG00000104413|Q6NXG1-3|ESRP1;nc|ENSG00000104413|Q6NXG1-4|ESRP1;nc|ENSG00000104413|Q6NXG1-5|ESRP1	88.17693792209575	0.07000514020414955	1				NaN	NaN	0	NaN	3900	3731	7632
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7634	25.385	NaN	2115.6	30	0	354.35	0.106	+			26387	LTEAPLNPK	9	57	491.7819474055828	981.5493418779656	2	491.78179931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LTEAPLNPK_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000403258.1_1_6:88986231-88986483:-|nuORF;ENST00000446382.2_1_9:6834760-6835018:+|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000502306.1_1_5:15450853-15451165:+|nuORF;ENST00000567299.1_1_19:9629420-9629708:+|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;nc|ENSG00000204434|Q9BYX7|POTEKP	67.49366992349736	0.1516260258713357	1				NaN	NaN	0	NaN	3901	3731	7632
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7635	25.386	NaN	1277.3	30	0	227.85	0.106			+	22814	KVFNNGTRAQ	10	47	567.8020629882812	NaN	0	567.8020629882812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KVFNNGTRAQ_	REV__ASH1L|p.K2377Nfs*5|1|0.28|ENSG00000116539|chr1:155354570-155354570|T/-|frameshift_variant;REV__ASH1L|p.S2309Ifs*11|1|0.64|ENSG00000116539|chr1:155357635-155357636|-/T|frameshift_variant;REV__ENSG00000116539|ENST00000392403|ASH1L;REV__nc|ENSG00000116539|Q9NR48|ASH1L	28.081489160057373	0.40797012399963245	1				NaN	NaN	0	NaN	3902	3731	7632
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7636	25.388	NaN	1140.6	30	0	115.07	0.038			+	16565	HFGVSNKTAPV	11	34	386.20845219342357	NaN	0	386.2084655761719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HFGVSNKTAPV_	REV__ENSG00000146530|ENST00000275358|VWDE;REV__VWDE|p.A290Cfs*4|1|0.41|ENSG00000146530|chr7:12379488-12379489|-/A|frameshift_variant;REV__VWDE|p.N589*|1|0.33|ENSG00000146530|chr7:12370687-12370688|-/A|frameshift_variant	32.81241826257853	0.4191849651971536	1				NaN	NaN	0	NaN	3903	3731	7632
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7642	25.404	NaN	2485.3	30	0	225	0.214	+			7823	DPVEPHGEM	9	63	505.7157979880277	1009.4170430428554	2	505.71685791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DPVEPHGEM_	ENSG00000130726|ENST00000253024|TRIM28;ENST00000601150.5_1_19:59059168-59060232:+|nuORF;nc|ENSG00000130726|Q13263-2|TRIM28	87.75429964447693	0.0711966946989736	1				NaN	NaN	0	NaN	3906	3734	7641
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7643	25.408	NaN	1961.8	30	0	988.54	0.106	+			13894	GRFVKVGEAI	10	43	538.3163049140102	1074.6180568948203	2	538.3175659179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GRFVKVGEAI_	CTNNAL1|p.C505Vfs*15|1|0.24|ENSG00000119326|chr9:108965456-108965456|A/-|frameshift_variant;ENSG00000119326|ENST00000325551|CTNNAL1;nc|ENSG00000119326|Q9UBT7-2|CTNNAL1;nc|ENSG00000119326|Q9UBT7-3|CTNNAL1	17.468008924990375	0.7276870902328821	1				NaN	NaN	0	NaN	3907	3734	7641
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7644	25.41	NaN	871.94	30	0	210.25	0.106	+			33231	RFVLRALR	8	26	344.2250792563219	NaN	0	344.2249450683594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RFVLRALR_	ENSG00000108344|ENST00000264639|PSMD3	17.364965105453717	1.7418937515398478	1				NaN	NaN	0	NaN	3908	3734	7641
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7645	25.412	NaN	1788.9	30	0	330.28	0.036			+	25939	LSHLEERSP	9	52	534.2773031520645	1066.540053370929	2	534.2784423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSHLEERSP_	REV__ENST00000502380.1_1_5:176936187-176937359:-|nuORF;REV__ENST00000512660.1_1_5:176936187-176936779:-|nuORF	41.42661286455405	0.403525789677298	1				NaN	NaN	0	NaN	3909	3734	7641
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7650	25.426	NaN	1480	30	0	258.97	0.142	+			45964	VASSSTTIVG	10	51	461.2476283815434	NaN	0	461.24761962890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VASSSTTIVG_	ENSG00000115252|ENST00000409365|PDE1A;nc|ENSG00000115252|P54750-2|PDE1A;nc|ENSG00000115252|P54750-3|PDE1A;nc|ENSG00000115252|P54750-4|PDE1A;nc|ENSG00000115252|P54750-5|PDE1A;nc|ENSG00000115252|P54750-7|PDE1A;nc|ENSG00000115252|P54750-8|PDE1A;nc|ENSG00000115252|P54750-9|PDE1A;nc|ENSG00000115252|P54750|PDE1A	45.9519527083369	0.331194823726099	1				NaN	NaN	0	NaN	3911	3737	7649
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7656	25.443	NaN	1985	30	0	360.43	0.142	+			27906	MTSTMTIGK	9	52	485.2403955792018	968.4662382252036	2	485.24017333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MTSTMTIGK_	ENSG00000131781|ENST00000254090|FMO5	58.22992032128504	0.22837015374068087	1				NaN	NaN	0	NaN	3914	3740	7655
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7660	25.46	NaN	1526.3	30	0	168.97	0.214			+	8184	EAATFRDQP	9	56	517.7505592962666	NaN	0	517.7511596679688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EAATFRDQP_	REV__ENST00000463224.5_1_10:105881848-105882847:+|nuORF	47.657333605630114	0.2228375344433429	1				NaN	NaN	0	NaN	3915	3743	7659
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7661	25.463	NaN	1793	30	0	453.37	0.106	+			38301	SQYTMGQK	8	52	471.72069016944874	941.4268274056975	2	471.7209777832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SQYTMGQK_	ENSG00000100578|ENST00000652326|KIAA0586;ENST00000557192.1_1_14:58896136-58899908:+|nuORF;KIAA0586|p.K791Rfs*14|1|0.33|ENSG00000100578|chr14:58467891-58467891|A/-|frameshift_variant;KIAA0586|p.L223Hfs*12|1|0.04|ENSG00000100578|chr14:58444079-58444080|-/CATTT|frameshift_variant;KIAA0586|p.P1497Lfs*6|1|0.11|ENSG00000100578|chr14:58547816-58547816|C/-|frameshift_variant;KIAA0586|p.S722Qfs*8|1|0.39|ENSG00000100578|chr14:58465980-58465980|T/-|frameshift_variant;nc|ENSG00000100578|Q9BVV6-2|KIAA0586;nc|ENSG00000100578|Q9BVV6-3|KIAA0586;nc|ENSG00000100578|Q9BVV6-4|KIAA0586;nc|ENSG00000100578|Q9BVV6|KIAA0586	31.954861631926434	0.7126016770032289	1				NaN	NaN	0	NaN	3916	3743	7659
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7662	25.465	NaN	1537	30	0	179.12	0.106	+			10796	FAIGSQTTK	9	46	476.758231058656	951.501909184112	2	477.259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FAIGSQTTK_	ENSG00000081154|ENST00000265260|PCNP;nc|ENSG00000081154|Q8WW12-2|PCNP	47.657333605630114	0.33044192980041115	1				NaN	NaN	0	NaN	3917	3743	7659
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7663	25.467	NaN	1136.9	30	0	127.29	0.036				-1	TWLGLKTIM	9	53	539.8017578125	NaN	0	539.8017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_TWLGLKTIM(Oxidation (M))_	ENSG00000128510|ENST00000222482|CPA4;nc|ENSG00000128510|Q9UI42-2|CPA4	47.657333605630114	0.2228375344433429	1				NaN	NaN	0	NaN	3918	3743	7659
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7673	25.491	NaN	840.46	30	0	63.694	0.145			+	15890	GYVDRSFVDI	10	46	585.7943477037553	1169.5741424743105	2	586.2975463867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GYVDRSFVDI_	REV__ANKRD36C|p.F1404Lfs*4|1|0.33|ENSG00000174501|chr2:95856049-95856049|A/-|frameshift_variant;REV__ENSG00000174501|ENST00000295246|ANKRD36C;REV__ENSG00000196912|ENST00000359901|ANKRD36B;REV__nc|ENSG00000174501|Q5JPF3|ANKRD36C;REV__nc|ENSG00000196912|Q8N2N9-2|ANKRD36B;REV__nc|ENSG00000196912|Q8N2N9-3|ANKRD36B;REV__nc|ENSG00000196912|Q8N2N9-4|ANKRD36B	25.57405402267927	0.6709832231498071	1				NaN	NaN	0	NaN	3925	3746	7672
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7679	25.509	NaN	2301.6	30	0	549.36	0.214			+	13590	GLVLGLAGNP	10	47	455.77123523986353	909.5279175465271	2	455.77093505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GLVLGLAGNP_	REV__ENST00000533629.5_1_11:65144527-65149406:-|nuORF	38.80614096846853	0.5601458937078225	1				NaN	NaN	0	NaN	3928	3749	7678
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7680	25.512	NaN	1424.6	30	0	217.64	0.106	+			13962	GSANLPLAK	9	49	435.75578349593496	NaN	0	435.75537109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSANLPLAK_	ACE|p.I462Lfs*63|2|0.27|ENSG00000159640|chr17:63483065-63483065|A/-|frameshift_variant;ACE|p.M457Wfs*68|1|0.41|ENSG00000159640|chr17:63483051-63483051|A/-|frameshift_variant;ACE|p.P1103Qfs*69|1|0.14|ENSG00000159640|chr17:63494393-63494393|C/-|frameshift_variant;ACE|p.S903Rfs*9|1|0.07|ENSG00000159640|chr17:63491014-63491014|C/-|frameshift_variant;ENSG00000159640|ENST00000290866|ACE;nc|ENSG00000159640|P12821-2|ACE	64.20726635412375	0.13137488984569443	1				NaN	NaN	0	NaN	3929	3749	7678
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7681	25.514	NaN	1824.4	30	0	258.62	0.106			+	9690	ELYQAQQK	8	60	504.26078794756046	1006.5070229619209	2	505.2627868652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ELYQAQQK_	REV__ENSG00000170776|ENST00000394518|AKAP13;REV__nc|ENSG00000170776|Q12802-2|AKAP13;REV__nc|ENSG00000170776|Q12802-4|AKAP13	36.446750945000026	0.6783611724927969	1				NaN	NaN	0	NaN	3930	3749	7678
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7682	25.516	NaN	1815.2	30	0	199.38	0.106			+	46535	VFALQQIR	8	56	487.79260446189534	973.5706559905907	2	487.7930603027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VFALQQIR_	REV__ENSG00000164088|ENST00000323588|PPM1M;REV__nc|ENSG00000164088|Q96MI6-1|PPM1M;REV__nc|ENSG00000164088|Q96MI6-4|PPM1M	28.2542754592877	0.7411748056684583	1				NaN	NaN	0	NaN	3931	3749	7678
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7683	25.518	NaN	1434.3	30	0	186.47	0.106	+			2649	AQLGWKSFL	9	53	525.29052734375	NaN	0	525.29052734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AQLGWKSFL_	ENSG00000145860|ENST00000424310|RNF145;ENST00000518062.1_1_5:158588183-158590023:-|nuORF;nc|ENSG00000145860|Q96MT1-2|RNF145;nc|ENSG00000145860|Q96MT1-3|RNF145;nc|ENSG00000145860|Q96MT1-4|RNF145;nc|ENSG00000145860|Q96MT1-5|RNF145;RNF145|p.R512C|1|0.37|ENSG00000145860|chr5:159161358-159161358|G/A|missense_variant;RNF145|p.T570Sfs*23|1|0.07|ENSG00000145860|chr5:159158953-159158954|-/AGCATAC|frameshift_variant	36.446750945000026	0.29355505452396785	1				NaN	NaN	0	NaN	3932	3749	7678
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7684	25.52	NaN	2392.6	30	0	706.78	0.036			+	26121	LSPHKKAQGI	10	42	360.21670720799347	NaN	0	360.5515441894531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSPHKKAQGI_	REV__ENSG00000189043|ENST00000339600|NDUFA4;REV__ENST00000486007.1_1_7:10977674-10979684:-|nuORF	28.081489160057373	0.40797012399963245	1				NaN	NaN	0	NaN	3933	3749	7678
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7695	25.545	NaN	3165.6	30	0	268.37	0.214			+	26331	LSWKTKSP	8	61	473.77135470815745	945.5281564831149	2	473.77166748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSWKTKSP_	REV__ENSG00000130803|ENST00000247956|ZNF317;REV__ENST00000590152.1_1_19:9267931-9272106:+|nuORF;REV__ENST00000591278.5_1_19:9268612-9272106:+|nuORF;REV__nc|ENSG00000130803|Q96PQ6-2|ZNF317;REV__nc|ENSG00000130803|Q96PQ6-3|ZNF317;REV__nc|ENSG00000130803|Q96PQ6-4|ZNF317;REV__ZNF317|p.E359Rfs*51|1|0.42|ENSG00000130803|chr19:9160716-9160716|G/-|frameshift_variant;REV__ZNF317|p.L487Pfs*6|1|0.3|ENSG00000130803|chr19:9161101-9161104|TATT/-|frameshift_variant	58.78195531508484	0.5138399468736706	1				NaN	NaN	0	NaN	3941	3752	7694
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7696	25.549	NaN	3381	30	0	322.01	0.106	+			43029	TEKVSKISL	9	71	502.80286708977906	1003.5911812463581	2	502.80279541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEKVSKISL_	ENSG00000054523|ENST00000676179|KIF1B;ENSG00000130294|ENST00000498729|KIF1A;KIF1A|p.N1306Kfs*14|1|0.46|ENSG00000130294|chr2:240725306-240725307|-/T|frameshift_variant;KIF1A|p.R782Afs*30|1|0.33|ENSG00000130294|chr2:240760738-240760738|G/-|frameshift_variant;KIF1B|p.N365Mfs*8|1|0.32|ENSG00000054523|chr1:10278037-10278037|C/-|frameshift_variant;nc|ENSG00000054523|O60333-2|KIF1B;nc|ENSG00000054523|O60333-3|KIF1B;nc|ENSG00000054523|O60333-4|KIF1B;nc|ENSG00000130294|Q12756-2|KIF1A;nc|ENSG00000130294|Q12756|KIF1A	75.65223720490533	0.11634833104049533	1				NaN	NaN	0	NaN	3942	3752	7694
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7697	25.551	NaN	3101.7	30	0	839.84	0.106	+			17436	IAVGKGSSL	9	47	416.25007770254916	830.4856024718983	2	416.25079345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IAVGKGSSL_	ENSG00000142871|ENST00000451137|CCN1	67.49366992349736	0.1516260258713357	1				NaN	NaN	0	NaN	3943	3752	7694
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7698	25.552	NaN	1681.2	30	0	236.88	0.106			+	18481	ISGCACGL	8	49	440.1879467903004	878.3613406474008	2	440.1885681152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term),2 Carbamidomethyl (C)	_(Acetyl (Protein N-term))ISGC(Carbamidomethyl (C))AC(Carbamidomethyl (C))GL_	REV__ENST00000263856.8_1_2:86732285-86732549:-|nuORF	44.53106598305862	0.628196326904373	1				NaN	NaN	0	NaN	3944	3752	7694
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7699	25.554	NaN	1386.6	30	0	225.94	0.106			+	-1	TCKLSRMK	8	52	512.2733931845916	1022.5322334359831	2	512.2743530273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_TC(Carbamidomethyl (C))KLSRMK_	REV__ENST00000524045.6_1_8:106797143-106799334:-|nuORF	30.503639358989545	0.7238069182250283	1				NaN	NaN	0	NaN	3945	3752	7694
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7700	25.556	NaN	4563.9	30	0	677.34	0.036	+			40437	STVNKWTLK	9	68	538.8081960007289	1075.6018390682577	2	538.8095092773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STVNKWTLK_	ENSG00000114742|ENST00000302313|WDR48;nc|ENSG00000114742|Q8TAF3-3|WDR48;nc|ENSG00000114742|Q8TAF3-4|WDR48	139.38205640894643	0.01076996779551382	1				NaN	NaN	0	NaN	3946	3752	7694
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7708	25.576	NaN	8519.6	30	0	714.27	0.214				-1	 	0	78	509.28178797168874	1016.5490230101775	2	509.2825012207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	3951	3755	7707
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7709	25.579	NaN	5813.4	30	0	1811.3	0.106	+			14052	GSIEINIKK	9	40	334.5374441474843	1000.5905030426529	3	334.5377502441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSIEINIKK_	ENSG00000064042|ENST00000503057|LIMCH1;LIMCH1|p.K805Rfs*20|1|0.37|ENSG00000064042|chr4:41680049-41680049|A/-|frameshift_variant;LIMCH1|p.T960Pfs*48|1|0.18|ENSG00000064042|chr4:41685768-41685768|A/-|frameshift_variant;nc|ENSG00000064042|Q9UPQ0-10|LIMCH1;nc|ENSG00000064042|Q9UPQ0-2|LIMCH1;nc|ENSG00000064042|Q9UPQ0-3|LIMCH1;nc|ENSG00000064042|Q9UPQ0-4|LIMCH1;nc|ENSG00000064042|Q9UPQ0-5|LIMCH1;nc|ENSG00000064042|Q9UPQ0-6|LIMCH1;nc|ENSG00000064042|Q9UPQ0-8|LIMCH1;nc|ENSG00000064042|Q9UPQ0-9|LIMCH1;nc|ENSG00000064042|Q9UPQ0|LIMCH1	38.80614096846853	0.43426287593479557	1				NaN	NaN	0	NaN	3952	3755	7707
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7710	25.581	NaN	1634.5	30	0	202.36	0.035				-1	EALQLQVAC	9	54	516.26258985414	1030.5106267750798	2	516.2636108398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_EALQLQVAC(Carbamidomethyl (C))_	ENSG00000147202|ENST00000324765|DIAPH2;nc|ENSG00000147202|O60879-2|DIAPH2;nc|ENSG00000147202|O60879-3|DIAPH2	35.61828744233558	0.47037581924408073	1				NaN	NaN	0	NaN	3953	3755	7707
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7718	25.601	NaN	3095.8	30	0	1268.9	0.214	+			40438	STVNKWTLK	9	42	359.541232994762	1075.6018695844862	3	359.5413818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STVNKWTLK_	ENSG00000114742|ENST00000302313|WDR48;nc|ENSG00000114742|Q8TAF3-3|WDR48;nc|ENSG00000114742|Q8TAF3-4|WDR48	44.377184641726394	0.36891676396732553	1				NaN	NaN	0	NaN	3958	3758	7717
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7719	25.605	NaN	3458.7	30	0	301.99	0.106	+			19928	KEFEGKTLV	9	71	525.7943926719914	1049.5742324107828	2	525.795166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEFEGKTLV_	ENSG00000080824|ENST00000216281|HSP90AA1;ENST00000378770.1_1_4:190394307-190396341:+|nuORF;ENST00000530115.1_1_11:27910903-27911533:-|nuORF;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000205100|Q58FG1|HSP90AA4P	109.43880257439609	0.029570636687953285	1				NaN	NaN	0	NaN	3959	3758	7717
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7720	25.607	NaN	1202.1	30	0	211.24	0.106	+			23049	KVTEGSFVYK	10	51	579.3128386496941	1156.611124366188	2	579.8148193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KVTEGSFVYK_	ENSG00000057608|ENST00000380191|GDI2;GDI2|p.S222Afs*20|1|0.1|ENSG00000057608|chr10:5785197-5785197|T/-|frameshift_variant	43.650786325866115	0.5155049133366767	1				NaN	NaN	0	NaN	3960	3758	7717
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7721	25.608	NaN	4742.7	30	0	1391.7	0.106	+			41848	SVSTVLTSK	9	49	461.26595194228884	920.5173509513777	2	461.2662048339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVSTVLTSK_	ENSG00000188536|ENST00000251595|HBA2;ENSG00000206172|ENST00000320868|HBA1;HBA1|p.A131T|1|0.07|ENSG00000206172|chr16:177373-177373|G/A|missense_variant	63.53385203322761	0.18415635464017938	1				NaN	NaN	0	NaN	3961	3758	7717
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7722	25.61	NaN	1660.4	30	0	136.15	0.037	+			34691	RVTPFILKK	9	47	367.9094198253356	1100.7064300762067	3	367.9096984863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RVTPFILKK_	ENSG00000175768|ENST00000321301|TOMM5;ENST00000354833.7_1_5:70213930-70214023:+|nuORF	34.172542307311794	0.4838870758800184	1				NaN	NaN	0	NaN	3962	3758	7717
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7734	25.637	NaN	1833.4	30	0	183.56	0.214			+	37763	SLVNEVRAL	9	58	500.79285189030014	999.5711508474003	2	500.7928771972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLVNEVRAL_	REV__ENSG00000138771|ENST00000296043|SHROOM3;REV__SHROOM3|p.G1864S|1|0.05|ENSG00000138771|chr4:76770866-76770866|G/A|missense_variant	60.11826168202944	0.21262886028301267	1				NaN	NaN	0	NaN	3971	3761	7733
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7735	25.641	NaN	1894.4	30	0	575.2	0.106				-1	AEVLMLIPV	9	32	334.197509765625	NaN	0	334.197509765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_AEVLM(Oxidation (M))LIPV_	tr|U7SLH7|U7SLH7_FUSNUCDP-diacylglycerol--glycerol-3-phosphate1-phosphatidyltransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01936PE=3SV=1	26.69291269510374	0.34280015626154364	1				NaN	NaN	0	NaN	3972	3761	7733
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7736	25.643	NaN	2674.2	30	0	952.84	0.036			+	-1	RMGKSAMIR	9	29	355.858665465334	NaN	0	355.8587951660156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_RM(Oxidation (M))GKSAMIR_	REV__ENSG00000146802|ENST00000312814|TMEM168;REV__TMEM168|p.T574Nfs*5|1|0.09|ENSG00000146802|chr7:112767570-112767571|-/T|frameshift_variant	30.317721548370564	0.32449924987115025	1				NaN	NaN	0	NaN	3973	3761	7733
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7747	25.667	NaN	1209.2	30	0	96.776	0.214			+	46451	VESKPSKEM	9	50	517.7638883821386	NaN	0	517.7634887695312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VESKPSKEM_	REV__ENSG00000166292|ENST00000424486|TMEM100;REV__TMEM100|p.L99Yfs*2|2|0.44|ENSG00000166292|chr17:55720775-55720775|A/-|frameshift_variant	40.77816245573522	0.2702456086868081	1				NaN	NaN	0	NaN	3981	3764	7746
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7748	25.671	NaN	2545.4	30	0	226.09	0.034	+			12148	GAIKVFVNK	9	59	488.3026211860331	974.5906894388662	2	488.3028869628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GAIKVFVNK_	ENSG00000131725|ENST00000254029|WDR44;nc|ENSG00000131725|Q5JSH3-2|WDR44;nc|ENSG00000131725|Q5JSH3-4|WDR44;WDR44|p.F898L|1|0.26|ENSG00000131725|chrX:118448939-118448939|C/A|missense_variant	104.74654710444128	0.034358562718640136	1				NaN	NaN	0	NaN	3982	3764	7746
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7759	25.695	NaN	2540.5	30	0	223.57	0.214	+			24259	LEVELDQAR	9	66	536.7848814443753	1071.5552099555505	2	536.7857666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LEVELDQAR_	ENSG00000137497|ENST00000393695|NUMA1;nc|ENSG00000137497|Q14980-2|NUMA1;nc|ENSG00000137497|Q14980-3|NUMA1;nc|ENSG00000137497|Q14980-4|NUMA1;NUMA1|p.K1766Rfs*2|1|0.39|ENSG00000137497|chr11:72007357-72007357|G/-|frameshift_variant;NUMA1|p.L1786Pfs*18|1|0.23|ENSG00000137497|chr11:72007295-72007296|-/G|frameshift_variant	79.71258880314673	0.09879134589249085	1				NaN	NaN	0	NaN	3990	3767	7758
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7760	25.698	NaN	2030	30	0	235.39	0.106	+			1760	AIANFTNQK	9	59	503.7689807007206	1005.5234084682412	2	503.76922607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AIANFTNQK_	ENSG00000138756|ENST00000502613|BMP2K;nc|ENSG00000138756|Q9NSY1-2|BMP2K;nc|ENSG00000138756|Q9NSY1-3|BMP2K	87.69643885390035	0.07135982304947239	1				NaN	NaN	0	NaN	3991	3767	7758
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7761	25.7	NaN	2075.1	30	0	509.7	0.106	+			37495	SLKVCYLQSI	10	41	577.3193769330326	1152.624200932865	2	577.320068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLKVCYLQSI_	ENST00000389793.6_1_1:235825353-235825464:-|nuORF	27.64392233501311	0.6540798421315833	1				NaN	NaN	0	NaN	3992	3767	7758
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7762	25.702	NaN	1819.1	30	0	406.38	0.106	+			18683	ITARVNVD	8	47	444.2502574445415	NaN	0	444.2508850097656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ITARVNVD_	ENSG00000144426|ENST00000683969|NBEAL1;NBEAL1|p.F2315Lfs*2|1|0.17|ENSG00000144426|chr2:203193900-203193900|T/-|frameshift_variant;NBEAL1|p.K2562Rfs*15|1|0.41|ENSG00000144426|chr2:203209306-203209306|A/-|frameshift_variant;NBEAL1|p.N2072Kfs*10|1|0.35|ENSG00000144426|chr2:203172825-203172826|-/A|frameshift_variant;nc|ENSG00000144426|Q6ZS30-1|NBEAL1;nc|ENSG00000144426|Q6ZS30|NBEAL1	58.78195531508484	1.7418937515398478	1				NaN	NaN	0	NaN	3993	3767	7758
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7763	25.704	NaN	2035.1	30	0	323.04	0.038			+	-1	MELFCRLLGL	10	38	404.21546645161663	1209.62456995505	3	404.55035400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_M(Oxidation (M))ELFCRLLGL_	REV__ENSG00000108510|ENST00000397786|MED13	29.170058357718403	0.6416167986984785	1				NaN	NaN	0	NaN	3994	3767	7758
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7774	25.729	NaN	1419.3	30	0	258.28	0.214	+			5650	AVDGNTVELK	10	49	523.2794548849187	1044.5443568366372	2	523.2803344726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVDGNTVELK_	ENSG00000177733|ENST00000314940|HNRNPA0	66.96192283764107	0.30252237217063654	1				NaN	NaN	0	NaN	4002	3770	7773
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7775	25.733	NaN	1947.7	30	0	401.09	0.106	+			32521	QVQVVLNQK	9	55	528.3131401870668	1054.6117274409335	2	528.3135986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QVQVVLNQK_	ENSG00000140688|ENST00000327237|RUSF1;ENST00000568491.1_1_16:31502158-31504599:-|nuORF;nc|ENSG00000140688|Q96GQ5-2|RUSF1	68.78682469695295	0.14603441672067394	1				NaN	NaN	0	NaN	4003	3770	7773
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7776	25.735	NaN	1885.6	30	0	305.84	0.106	+			19508	KAVDSLVKK	9	52	494.3131893397858	986.6118257463717	2	494.31280517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KAVDSLVKK_	ENSG00000120693|ENST00000379826|SMAD9;nc|ENSG00000120693|O15198-2|SMAD9;SMAD9|p.A424Cfs*2|1|0.07|ENSG00000120693|chr13:36848811-36848812|-/C|frameshift_variant	51.33545320467046	0.2872990594074956	1				NaN	NaN	0	NaN	4004	3770	7773
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7777	25.737	NaN	1084.8	30	0	266.39	0.106			+	-1	EEQLRKITNG	10	40	410.5546875	NaN	0	410.5546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))EEQLRKITNG_	REV__ENSG00000121774|ENST00000327300|KHDRBS1;REV__ENST00000307714.12_1_1:32479575-32503673:+|nuORF;REV__KHDRBS1|p.A312Gfs*56|1|0.28|ENSG00000121774|chr1:32037857-32037858|-/G|frameshift_variant;REV__KHDRBS1|p.P237Hfs*19|1|0.32|ENSG00000121774|chr1:32033269-32033269|C/-|frameshift_variant;REV__KHDRBS1|p.P336Hfs*4|1|0.41|ENSG00000121774|chr1:32037932-32037932|C/-|frameshift_variant;REV__KHDRBS1|p.Q180K|1|0.28|ENSG00000121774|chr1:32031554-32031554|C/A|missense_variant;REV__nc|ENSG00000121774|Q07666-2|KHDRBS1	25.125986553469783	0.41767453237088564	1				NaN	NaN	0	NaN	4005	3770	7773
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7778	25.739	NaN	3781.3	30	0	475.81	0.036			+	13327	GKMEISRVY	9	67	541.786363768771	1081.558174604342	2	541.7876586914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GKMEISRVY_	REV__CCDC110|p.N755Mfs*18|1|0.24|ENSG00000168491|chr4:185458323-185458323|T/-|frameshift_variant	56.72105179125745	0.24094814563026265	1				NaN	NaN	0	NaN	4006	3770	7773
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7790	25.765	NaN	6875.7	30	0	1132.1	0.214	+			36724	SGVKGYEEK	9	65	498.75297890844143	995.4914048836829	2	499.25103759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SGVKGYEEK_	ENSG00000143614|ENST00000368655|GATAD2B	60.11826168202944	0.21262886028301267	1				NaN	NaN	0	NaN	4015	3773	7789
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7791	25.768	NaN	2217.5	30	0	173.72	0.106	+			24193	LEQKVASL	8	54	444.26312255859375	NaN	0	444.26312255859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LEQKVASL_	ENSG00000131018|ENST00000367255|SYNE1;ENST00000490135.6_1_6:152637953-152655276:-|nuORF;nc|ENSG00000131018|Q8NF91-4|SYNE1;nc|ENSG00000131018|Q8NF91-7|SYNE1;SYNE1|p.E5862Gfs*83|1|0.12|ENSG00000131018|chr6:152300729-152300738|CCAGACTCCT/-|frameshift_variant;SYNE1|p.G6773Wfs*7|1|0.44|ENSG00000131018|chr6:152236186-152236187|-/A|frameshift_variant;SYNE1|p.K6871Rfs*22|2|0.52|ENSG00000131018|chr6:152233881-152233881|T/-|frameshift_variant;SYNE1|p.L8283Pfs*8|1|0.19|ENSG00000131018|chr6:152148173-152148174|-/G|frameshift_variant;SYNE1|p.M5602Nfs*13|2|0.32|ENSG00000131018|chr6:152310779-152310780|-/T|frameshift_variant;SYNE1|p.V8635Sfs*12|1|0.15|ENSG00000131018|chr6:152133375-152133375|T/-|frameshift_variant	76.7741389293348	1.7418937515398478	1				NaN	NaN	0	NaN	4016	3773	7789
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7792	25.77	NaN	3993.7	30	0	1125.9	0.106	+			4891	ATQEGEWKALK	11	45	420.8908386230469	NaN	0	420.8908386230469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATQEGEWKALK_	ENSG00000087269|ENST00000416614|NOP14	34.08650109265054	0.41350691770670583	1				NaN	NaN	0	NaN	4017	3773	7789
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7793	25.772	NaN	4557.7	30	0	2733.2	0.039			+	2221	ALRREEISYL	10	47	417.23458132027787	NaN	0	417.56866455078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ALRREEISYL_	REV__ENSG00000133640|ENST00000393217|LRRIQ1;REV__ENST00000525971.6_1_12:85431954-85518298:+|nuORF;REV__nc|ENSG00000133640|Q96JM4-2|LRRIQ1	30.317721548370564	0.4006274431774794	1				NaN	NaN	0	NaN	4018	3773	7789
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7804	25.891	NaN	43783	30	0	23688	0.214	+			30619	QASDVSVKY	9	74	498.75297890844143	995.4914048836829	2	498.7533874511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QASDVSVKY_	ENSG00000047410|ENST00000367478|TPR;nc|ENSG00000047410|P12270-2|TPR;TPR|p.E1141Dfs*29|1|0.08|ENSG00000047410|chr1:186344085-186344086|-/CAGGTAAA|frameshift_variant;TPR|p.G216Rfs*3|1|0.34|ENSG00000047410|chr1:186362887-186362888|-/T|frameshift_variant;TPR|p.P2083Qfs*3|1|0.31|ENSG00000047410|chr1:186323735-186323735|G/-|frameshift_variant;TPR|p.T2133Lfs*63|1|0.03|ENSG00000047410|chr1:186322382-186322383|-/GTACTAATAAG|frameshift_variant;TPR|p.V1142Efs*26|1|0.08|ENSG00000047410|chr1:186344083-186344084|-/TT|frameshift_variant	141.52041321563706	0.009766778904176347	1				NaN	NaN	0	NaN	4026	3776	7803
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7805	25.895	NaN	30900	30	0	11397	0.106	+			14964	GTMTGMLYK	9	68	509.2400852556009	1016.4656175780018	2	509.2408752441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_GTM(Oxidation (M))TGMLYK_	ENSG00000178440|ENST00000651763|TIMM23B-AGAP6;ENSG00000204152|ENST00000651259|TIMM23B;ENSG00000265354|ENST00000580018|TIMM23;nc|ENSG00000204152|Q5SRD1-2|TIMM23B	131.03138772384656	0.014687601201650916	1				NaN	NaN	0	NaN	4027	3776	7803
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7806	25.897	NaN	4501.4	30	0	1594.7	0.106	+			3948	ATATGTEILK	10	65	502.78475165375585	NaN	0	502.7846374511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATATGTEILK_	ENSG00000159593|ENST00000290810|NAE1;ENST00000562757.5_1_16:66857380-66864856:-|nuORF;ENST00000563419.5_1_16:66858748-66864862:-|nuORF;ENST00000564040.6_1_16:66857135-66864856:-|nuORF;ENST00000569963.1_1_16:66860370-66864856:-|nuORF;nc|ENSG00000159593|Q13564-2|NAE1;nc|ENSG00000159593|Q13564-4|NAE1	56.43379154798735	0.2634004003759929	1				NaN	NaN	0	NaN	4028	3776	7803
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7807	25.898	NaN	6867.4	30	0	2983.1	0.106			+	43755	TLFNEVAFLG	10	49	370.8667630220433	1109.57845966633	3	370.86676025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TLFNEVAFLG_	REV__sp|F5HC97|VPAP_HCMVMDNApolymeraseprocessivityfactorOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL44PE=3SV=1;REV__sp|P16790|VPAP_HCMVADNApolymeraseprocessivityfactorOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL44PE=1SV=1	32.81241826257853	0.6118718159329168	1				NaN	NaN	0	NaN	4029	3776	7803
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7808	25.9	NaN	7273.9	30	0	706.48	0.106	+			35336	SAPASQASL	9	58	416.21359771618256	830.4126424991651	2	416.21380615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SAPASQASL_	ENSG00000137497|ENST00000393695|NUMA1;ENST00000540626.5_1_11:71714575-71718510:-|nuORF;nc|ENSG00000137497|Q14980-2|NUMA1;nc|ENSG00000137497|Q14980-5|NUMA1	136.26810882979174	0.012230845423532208	1				NaN	NaN	0	NaN	4030	3776	7803
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7809	25.902	NaN	10301	30	0	2861.2	0.039	+			39702	STIPPELVKQK	11	50	413.9147248957513	1238.722345287454	3	413.9148864746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STIPPELVKQK_	ENSG00000058729|ENST00000283109|RIOK2	51.52775601994872	0.4002081502334604	1				NaN	NaN	0	NaN	4031	3776	7803
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7810	25.903	NaN	1964.5	30	0	390.62	0.139			+	-1	ISIIDGLSM	9	55	482.75362737741483	963.4927018216297	2	482.7535705566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_ISIIDGLSM(Oxidation (M))_	REV__tr|U7SSJ8|U7SSJ8_FUSNUIntegralmembraneproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01291PE=4SV=1	47.91560031466742	0.327412564698279	1				NaN	NaN	0	NaN	4032	3776	7803
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7821	25.93	NaN	11941	30	0	1105.1	0.215	+			4415	ATIEEAYSR	9	69	520.2561915856069	1038.4978302380136	2	520.25732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATIEEAYSR_	ENSG00000157107|ENST00000430046|FCHO2;nc|ENSG00000157107|Q0JRZ9-2|FCHO2;nc|ENSG00000157107|Q0JRZ9-3|FCHO2	143.37361013837676	0.008897369944672323	1				NaN	NaN	0	NaN	4040	3779	7820
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7822	25.934	NaN	5329.3	30	0	1831.2	0.106	+			1939	AISPLVSEK	9	57	472.27634785351574	942.5381427738315	2	472.27630615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AISPLVSEK_	ENSG00000103194|ENST00000219473|USP10;ENST00000540269.6_1_16:84778297-84793504:+|nuORF;ENST00000547785.2_1_14:20146241-20147198:+|nuORF;ENST00000548656.2_1_14:19412496-19412640:-|nuORF;nc|ENSG00000103194|Q14694-2|USP10;nc|ENSG00000103194|Q14694-3|USP10	54.776311868738084	0.25715957988447635	1				NaN	NaN	0	NaN	4041	3779	7820
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7823	25.936	NaN	1782.4	30	0	167.18	0.106	+			33425	RIIEPLTSR	9	59	542.8268490414113	1083.6391451496224	2	542.8275756835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RIIEPLTSR_	ENSG00000163918|ENST00000296273|RFC4;ENST00000479307.5_1_3:186508099-186512490:-|nuORF;ENST00000494047.5_1_3:186509405-186522502:-|nuORF;nc|ENSG00000163918|P35249-2|RFC4	47.95952297671804	0.32689736945648856	1				NaN	NaN	0	NaN	4042	3779	7820
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7824	25.937	NaN	1956.4	30	0	290.22	0.106	+			8888	EETGAKISV	9	52	467.247850432364	932.481147931528	2	467.2481689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EETGAKISV_	ENSG00000121774|ENST00000327300|KHDRBS1;ENST00000307714.12_1_1:32479575-32503673:+|nuORF;KHDRBS1|p.A312Gfs*56|1|0.28|ENSG00000121774|chr1:32037857-32037858|-/G|frameshift_variant;KHDRBS1|p.P237Hfs*19|1|0.32|ENSG00000121774|chr1:32033269-32033269|C/-|frameshift_variant;KHDRBS1|p.P336Hfs*4|1|0.41|ENSG00000121774|chr1:32037932-32037932|C/-|frameshift_variant;nc|ENSG00000121774|Q07666-2|KHDRBS1	60.11826168202944	0.21262886028301267	1				NaN	NaN	0	NaN	4043	3779	7820
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7825	25.939	NaN	1296.2	30	0	559.72	0.106	+			46910	VITPFIALII	10	45	550.358429165349	NaN	0	550.3587646484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VITPFIALII_	tr|U7SL09|U7SL09_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02025PE=4SV=1	24.20275056022122	0.4201028297492154	1				NaN	NaN	0	NaN	4044	3779	7820
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7826	25.941	NaN	1488.2	30	0	134.73	0.033			+	-1	NVGCDMAL	8	61	440.1879467903004	878.3613406474008	2	440.1886901855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_NVGC(Carbamidomethyl (C))DMAL_	REV__ENSG00000165140|ENST00000375326|FBP1;REV__FBP1|p.G294Efs*11|1|0.11|ENSG00000165140|chr9:94603517-94603517|C/-|frameshift_variant	37.15910966729921	0.6739408393984688	1				NaN	NaN	0	NaN	4045	3779	7820
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7827	25.942	NaN	1244	30	0	190.02	0.141			+	24158	LELRFQTAI	9	49	545.8174685098467	NaN	0	545.8180541992188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LELRFQTAI_	REV__ENSG00000152582|ENST00000356031|SPEF2;REV__nc|ENSG00000152582|Q9C093-2|SPEF2	33.921630207806714	0.3063038642147651	1				NaN	NaN	0	NaN	4046	3779	7820
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7838	25.969	NaN	14201	30	0	1504.7	0.214	+			45750	VAEENTRVL	9	74	515.7804548381171	NaN	0	515.7801513671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VAEENTRVL_	ENSG00000156256|ENST00000399976|USP16;ENST00000485067.1_1_21:30426080-30426505:+|nuORF;nc|ENSG00000156256|Q9Y5T5-2|USP16;nc|ENSG00000156256|Q9Y5T5-3|USP16;nc|ENSG00000156256|Q9Y5T5-4|USP16	81.52500206392136	0.06615817976141032	1				NaN	NaN	0	NaN	4054	3782	7837
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7839	25.973	NaN	5551.9	30	0	1207.7	0.106	+			39178	SSYPVCVSK	9	59	485.2388051190665	968.463057304933	2	485.2383117675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSYPVCVSK_	ENSG00000089127|ENST00000202917|OAS1;ENST00000549820.1_1_12:113344820-113354315:+|nuORF;nc|ENSG00000089127|P00973-2|OAS1;nc|ENSG00000089127|P00973-3|OAS1;nc|ENSG00000089127|P00973-4|OAS1;OAS1|p.N280Tfs*8|1|0.07|ENSG00000089127|chr12:112916689-112916689|A/-|frameshift_variant	75.04331003522576	0.118981335847003	1				NaN	NaN	0	NaN	4055	3782	7837
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7840	25.975	NaN	3921.6	30	0	786.15	0.034	+			15804	GVVQPGRSL	9	54	456.76647033573073	911.5183877382615	2	456.76605224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GVVQPGRSL_	nc|ENSG00000211955|P01772|IGHV3-33;nc|ENSG00000211955|P0DP02|IGHV3-30-3;nc|ENSG00000270550|P0DP03|IGHV3-30-5	45.97224482568171	0.3502073465782774	1				NaN	NaN	0	NaN	4056	3782	7837
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7848	25.995	NaN	28602	30	0	3558.1	0.214	+			48499	VTNDGATILK	10	79	516.2894700681162	1030.5643872030323	2	516.2888793945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTNDGATILK_	ENSG00000166226|ENST00000299300|CCT2;ENST00000546859.5_1_12:69979244-69981900:+|nuORF;ENST00000550455.5_1_12:69979244-69981425:+|nuORF;ENST00000550638.5_1_12:69979244-69982049:+|nuORF;ENST00000551620.5_1_12:69979244-69983508:+|nuORF;nc|ENSG00000166226|P78371-2|CCT2	123.11161354013207	0.02293503976405718	1				NaN	NaN	0	NaN	4061	3785	7847
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7849	25.999	NaN	2694.2	30	0	1246.7	0.106			+	-1	NLPPPPAPMWP	11	36	411.5440368652344	NaN	0	411.5440368652344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_NLPPPPAPM(Oxidation (M))WP_	REV__nc|ENSG00000163746|Q9NRY7-3|PLSCR2;REV__nc|ENSG00000163746|Q9NRY7|PLSCR2	20.030474535948922	0.456735970842152	1				NaN	NaN	0	NaN	4062	3785	7847
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7850	26.001	NaN	1013.2	30	0	292.82	0.033	+			43494	TGPVMPVR	8	45	428.7389592240326	NaN	0	428.73883056640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TGPVMPVR_	ENSG00000167526|ENST00000311528|RPL13;ENST00000399461.8_1_16:89627605-89629447:+|nuORF;ENST00000484610.5_1_16:89627907-89629447:+|nuORF;ENST00000570149.1_1_16:89628679-89629447:+|nuORF;nc|ENSG00000167526|P26373-2|RPL13	65.80317337860623	1.7418937515398478	1				NaN	NaN	0	NaN	4063	3785	7847
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7859	26.023	NaN	1238.2	30	0	150.87	0.214			+	36834	SIFDLHQSI	9	44	530.2779707653978	NaN	0	530.2778930664062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIFDLHQSI_	REV__ENSG00000133048|ENST00000255409|CHI3L1;REV__ENST00000472064.1_1_1:203149576-203151929:-|nuORF	51.19269402634007	0.19847346126499396	1				NaN	NaN	0	NaN	4069	3788	7858
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7860	26.027	NaN	1903.9	30	0	823.98	0.106			+	32489	QVNSLDLKK	9	50	522.8060626163427	1043.5975722994854	2	522.8074951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QVNSLDLKK_	REV__ENSG00000186868|ENST00000262410|MAPT;REV__MAPT|p.G621Qfs*10|1|0.1|ENSG00000186868|chr17:46010397-46010398|GG/-|frameshift_variant;REV__nc|ENSG00000186868|P10636-6|MAPT;REV__nc|ENSG00000186868|P10636-7|MAPT;REV__nc|ENSG00000186868|P10636-8|MAPT;REV__nc|ENSG00000186868|P10636-9|MAPT;REV__nc|ENSG00000186868|P10636|MAPT	40.77816245573522	0.41113185337114944	1				NaN	NaN	0	NaN	4070	3788	7858
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7861	26.029	NaN	2075.7	30	0	234.95	0.036	+			26448	LTGSLVLMNQ	10	67	546.292002744101	1090.5694525550018	2	546.2936401367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_LTGSLVLM(Oxidation (M))NQ_	ENSG00000111817|ENST00000644252|DSE	77.31757898189308	0.2175361111083648	1				NaN	NaN	0	NaN	4071	3788	7858
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7870	26.051	NaN	10159	30	0	3122.3	0.214	+			15483	GVAGGSILK	9	60	401.244772985972	800.4749930387441	2	401.2451477050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVAGGSILK_	EIF2S3|p.I441Nfs*4|1|0.29|ENSG00000130741|chrX:24073223-24073224|-/A|frameshift_variant;ENSG00000130741|ENST00000253039|EIF2S3;ENSG00000180574|ENST00000538173|EIF2S3B;nc|ENSG00000180574|Q2VIR3-2|EIF2S3B	74.25504064058377	0.12238981753128622	1				NaN	NaN	0	NaN	4077	3791	7869
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7871	26.055	NaN	6010	30	0	638.29	0.106	+			45579	TYNQKHSLF	9	74	569.2873832205659	1136.5602135079316	2	569.2887573242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TYNQKHSLF_	ENSG00000165175|ENST00000614558|MID1IP1	71.87747018426188	0.13267044672804276	1				NaN	NaN	0	NaN	4078	3791	7869
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7872	26.057	NaN	10854	30	0	2303.6	0.037	+			45580	TYNQKHSLF	9	60	379.86084212669823	1136.5606969802948	3	380.195556640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TYNQKHSLF_	ENSG00000165175|ENST00000614558|MID1IP1	30.503639358989545	0.5181749237905803	1				NaN	NaN	0	NaN	4079	3791	7869
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7881	26.077	NaN	3010.2	30	0	393.83	0.214			+	48315	VTFEASRAE	9	60	505.25121880155575	1008.4878846699115	2	505.2512512207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTFEASRAE_	REV__ENSG00000181036|ENST00000368106|FCRL6;REV__nc|ENSG00000181036|Q6DN72-2|FCRL6;REV__nc|ENSG00000181036|Q6DN72-4|FCRL6	71.87747018426188	0.13267044672804276	1				NaN	NaN	0	NaN	4085	3794	7880
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7882	26.081	NaN	5776.8	30	0	2996.5	0.04				-1	NYCEITGMNTL	11	43	444.5246889585283	1330.552237475785	3	444.5252685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_NYC(Carbamidomethyl (C))EITGM(Oxidation (M))NTL_	ENSG00000137812|ENST00000399668|KNL1;ENST00000533001.1_1_15:40886490-40917961:+|nuORF;nc|ENSG00000137812|Q8NG31-3|KNL1;nc|ENSG00000137812|Q8NG31-4|KNL1;nc|ENSG00000137812|Q8NG31|KNL1	14.086013023434994	0.8045329596154472	1				NaN	NaN	0	NaN	4086	3794	7880
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7889	26.099	NaN	4734.1	30	0	560.03	0.214	+			35577	SAYGSVKAY	9	58	473.23724236869043	944.4599318041809	2	473.23699951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAYGSVKAY_	ENSG00000182718|ENST00000451270|ANXA2;ENST00000557937.5_1_15:60655071-60678274:-|nuORF;nc|ENSG00000182718|P07355-2|ANXA2;nc|ENSG00000231991|A6NMY6|ANXA2P2;NPTN-ANXA2|1|fusion	90.60085204095205	0.06317133949006545	1				NaN	NaN	0	NaN	4090	3797	7888
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7890	26.103	NaN	3458.6	30	0	402.23	0.106	+			2463	APLKSKMIY	9	68	525.804102418379	1049.5936519035579	2	525.8037719726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_APLKSKMIY_	ENSG00000125868|ENST00000246069|DSTN;ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65623104-65623215:-|nuORF;ENST00000602547.1_1_12:6994092-6994545:+|nuORF;nc|ENSG00000125868|P60981-2|DSTN;nc|ENSG00000165410|Q9Y281-3|CFL2	85.16082228582465	0.07850854922700509	1				NaN	NaN	0	NaN	4091	3797	7888
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7891	26.105	NaN	3166	30	0	1062	0.106	+			5233	ATVAEKTK	8	47	424.2475735453178	846.4805941574356	2	424.2476806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATVAEKTK_	ENSG00000145335|ENST00000394991|SNCA;nc|ENSG00000145335|P37840-2|SNCA;SNCA|p.G51V|1|0.05|ENSG00000145335|chr4:89828154-89828154|C/A|missense_variant	54.776311868738084	0.5534952410049249	1				NaN	NaN	0	NaN	4092	3797	7888
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7892	26.107	NaN	970.18	30	0	118.49	0.106			+	31684	QNKTINFKT	9	54	547.302700902775	1092.5908488723499	2	547.3048706054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QNKTINFKT_	REV__tr|U7T1R0|U7T1R0_FUSNUUDP-N-acetylmuramoylalanine--D-glutamateligaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=murDPE=3SV=1	72.87924865735499	0.12833875048249987	1				NaN	NaN	0	NaN	4093	3797	7888
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7893	26.109	NaN	1693.8	30	0	235.14	0.034	+			14101	GSLGQTVGAPA	11	43	479.2533910556301	956.4922291780603	2	479.2530517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GSLGQTVGAPA_	ENSG00000165821|ENST00000537235|SALL2;nc|ENSG00000165821|Q9Y467|SALL2	36.446750945000026	0.6065623449959539	1				NaN	NaN	0	NaN	4094	3797	7888
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7901	26.127	NaN	2022.2	30	0	411.13	0.214	+			47352	VPEEGGATHVY	11	54	579.7744154453237	1157.5342779574473	2	579.7749633789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VPEEGGATHVY_	ENSG00000166452|ENST00000309377|AKIP1;nc|ENSG00000166452|Q9NQ31-2|AKIP1;nc|ENSG00000166452|Q9NQ31-3|AKIP1	98.62937762414208	0.06352067827605054	1				NaN	NaN	0	NaN	4099	3800	7900
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7902	26.13	NaN	1386.8	30	0	185	0.106	+			43695	TKILLNYF	8	56	506.2950870670153	1010.5756212008306	2	506.2956848144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TKILLNYF_	ENSG00000152952|ENST00000282903|PLOD2;nc|ENSG00000152952|O00469|PLOD2;PLOD2|p.N725Mfs*11|1|0.12|ENSG00000152952|chr3:146070757-146070757|T/-|frameshift_variant	23.04248740728303	0.7814162927298575	1				NaN	NaN	0	NaN	4100	3800	7900
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7903	26.132	NaN	908.62	30	0	84.34	0.036			+	-1	KEMVCKRVT	9	49	555.2953242754553	1108.5760956177105	2	555.2960205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_KEM(Oxidation (M))VCKRVT_	REV__SP140|p.K364Ifs*47|1|0.04|ENSG00000079263|chr2:230253348-230253349|-/TTCTC|frameshift_variant	33.921630207806714	0.48623198279849766	1				NaN	NaN	0	NaN	4101	3800	7900
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7910	26.151	NaN	4027.2	30	0	1062.7	0.214	+			14254	GSSYPVCVSK	10	53	513.7493058134193	1025.4840586936384	2	513.7501220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSSYPVCVSK_	ENSG00000089127|ENST00000202917|OAS1;ENST00000549820.1_1_12:113344820-113354315:+|nuORF;nc|ENSG00000089127|P00973-2|OAS1;nc|ENSG00000089127|P00973-3|OAS1;nc|ENSG00000089127|P00973-4|OAS1;OAS1|p.N280Tfs*8|1|0.07|ENSG00000089127|chr12:112916689-112916689|A/-|frameshift_variant	51.52775601994872	0.4429225830406686	1				NaN	NaN	0	NaN	4105	3803	7909
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7911	26.154	NaN	4021.5	30	0	817.05	0.106	+			6300	AVSTLGISK	9	56	438.262907348072	874.5112617629441	2	438.2630920410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVSTLGISK_	ENSG00000103160|ENST00000219439|HSDL1;nc|ENSG00000103160|Q3SXM5-2|HSDL1	51.19269402634007	0.2889735674168909	1				NaN	NaN	0	NaN	4106	3803	7909
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7912	26.156	NaN	2769.9	30	0	637.33	0.106	+			5496	AVADSVLTK	9	61	452.2601038969291	902.5056548606582	2	452.2609558105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVADSVLTK_	ENSG00000173821|ENST00000582970|RNF213;ENST00000559070.5_1_17:78261823-78310301:+|nuORF;nc|ENSG00000173821|Q63HN8-4|RNF213;nc|ENSG00000173821|Q63HN8|RNF213;RNF213|p.C5022Lfs*7|1|0.3|ENSG00000173821|chr17:80389237-80389237|G/-|frameshift_variant;RNF213|p.P2167Lfs*64|1|0.09|ENSG00000173821|chr17:80344834-80344835|-/T|frameshift_variant;RNF213|p.Q1953Rfs*50|2|0.13|ENSG00000173821|chr17:80340219-80340219|C/-|frameshift_variant	41.42661286455405	0.403525789677298	1				NaN	NaN	0	NaN	4107	3803	7909
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7913	26.158	NaN	2088.4	30	0	322.47	0.035	+			22967	KVRAHRGPS	9	55	504.2976556429041	NaN	0	504.29803466796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KVRAHRGPS_	ENST00000565205.5_1_16:88925858-88927364:+|nuORF	44.116797842482775	0.2472372736944149	1				NaN	NaN	0	NaN	4108	3803	7909
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7924	26.183	NaN	2374	30	0	403.11	0.214	+			781	AEFAERTVA	9	47	497.2533908367872	992.4922287403745	2	497.253662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEFAERTVA_	ENSG00000167460|ENST00000643579|TPM4;ENST00000368528.3_1_3:27674554-27675208:+|nuORF;ENST00000520239.1_1_8:70042334-70042577:+|nuORF;nc|ENSG00000167460|P67936-2|TPM4	58.22992032128504	0.22837015374068087	1				NaN	NaN	0	NaN	4116	3806	7923
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7925	26.187	NaN	1715.2	30	0	238.85	0.106	+			3592	ASVKAIFSK	9	51	475.7869818776179	949.5594108220358	2	475.78662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASVKAIFSK_	ENSG00000083642|ENST00000315596|PDS5B;nc|ENSG00000083642|Q9NTI5-2|PDS5B;PDS5B|p.G721Dfs*35|1|0.13|ENSG00000083642|chr13:32732132-32732132|A/-|frameshift_variant;PDS5B|p.K1268Rfs*8|1|0.07|ENSG00000083642|chr13:32770296-32770296|A/-|frameshift_variant;PDS5B|p.K1287Rfs*22|1|0.26|ENSG00000083642|chr13:32770351-32770351|A/-|frameshift_variant;PDS5B|p.K693Qfs*8|1|0.11|ENSG00000083642|chr13:32710054-32710055|-/T|frameshift_variant;PDS5B|p.N1390Cfs*12|1|0.44|ENSG00000083642|chr13:32770750-32770751|AA/-|frameshift_variant;PDS5B|p.S1198Vfs*10|1|0.28|ENSG00000083642|chr13:32764556-32764556|A/-|frameshift_variant	27.047317107675042	0.5504760921104335	1				NaN	NaN	0	NaN	4117	3806	7923
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7926	26.189	NaN	1934.2	30	0	192.97	0.035			+	10290	ETNPAVLSF	9	56	489.2483930946969	NaN	0	489.248291015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ETNPAVLSF_	REV__ENSG00000138182|ENST00000371728|KIF20B;REV__KIF20B|p.F444Lfs*9|1|0.09|ENSG00000138182|chr10:89718764-89718764|T/-|frameshift_variant;REV__KIF20B|p.K592Rfs*4|1|0.37|ENSG00000138182|chr10:89724010-89724010|A/-|frameshift_variant;REV__KIF20B|p.N1214Tfs*5|1|0.15|ENSG00000138182|chr10:89738478-89738478|A/-|frameshift_variant;REV__KIF20B|p.N445*|1|0.1|ENSG00000138182|chr10:89718763-89718764|-/T|frameshift_variant;REV__KIF20B|p.R1552Gfs*9|1|0.39|ENSG00000138182|chr10:89758852-89758852|A/-|frameshift_variant;REV__nc|ENSG00000138182|Q96Q89-2|KIF20B;REV__nc|ENSG00000138182|Q96Q89-3|KIF20B;REV__nc|ENSG00000138182|Q96Q89-4|KIF20B	56.72105179125745	0.16330365735109603	1				NaN	NaN	0	NaN	4118	3806	7923
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7937	26.212	NaN	2989.1	30	0	437.13	0.143	+			23002	KVSGDIFSR	9	63	504.77708832702376	1007.5396237208475	2	504.77703857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVSGDIFSR_	ENSG00000181404|ENST00000696149|WASHC1;ENST00000400706.3_1_12:78799-87272:+|nuORF;ENST00000488147.1_1_1:18362-24778:-|nuORF;ENST00000557932.5_1_15:102506277-102513446:+|nuORF;ENST00000558686.5_1_15:102506217-102512799:+|nuORF;nc|ENSG00000185596|C4AMC7|WASH3P;nc|ENSG00000291134|Q6VEQ5|WASH2P	63.53385203322761	0.18415635464017938	1				NaN	NaN	0	NaN	4126	3809	7936
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7946	26.236	NaN	3279.5	30	0	543.91	0.214	+			675	AEAKEKIYL	9	64	532.8032129675768	1063.5918730019534	2	532.8031005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEAKEKIYL_	ENSG00000133706|ENST00000394434|LARS1;ENST00000508667.5_1_5:145522961-145531505:-|nuORF;nc|ENSG00000133706|Q9P2J5-2|LARS1	60.11826168202944	0.21262886028301267	1				NaN	NaN	0	NaN	4132	3812	7945
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7947	26.24	NaN	1760.3	30	0	624.46	0.106	+			14965	GTMTGMLYK	9	55	509.2400852556009	1016.4656175780018	2	509.2405090332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_GTM(Oxidation (M))TGMLYK_	ENSG00000178440|ENST00000651763|TIMM23B-AGAP6;ENSG00000204152|ENST00000651259|TIMM23B;ENSG00000265354|ENST00000580018|TIMM23;nc|ENSG00000204152|Q5SRD1-2|TIMM23B	56.72105179125745	0.24094814563026265	1				NaN	NaN	0	NaN	4133	3812	7945
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7948	26.242	NaN	4321.1	30	0	836.87	0.106	+			35085	SAFSTSISK	9	55	464.2428587466991	NaN	0	464.2427062988281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAFSTSISK_	ENSG00000179115|ENST00000314606|FARSA;ENST00000592662.5_1_19:13039347-13044510:-|nuORF	76.16968421966216	0.08450868013726211	1				NaN	NaN	0	NaN	4134	3812	7945
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7949	26.243	NaN	3556	30	0	1279.1	0.106	+			29733	PHPNVMPASM	10	65	540.7528793398479	1079.4912057464958	2	540.7537231445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PHPNVMPASM_	ENSG00000134138|ENST00000561208|MEIS2;ENST00000397620.6_1_15:37388598-37391110:-|nuORF;ENST00000561163.5_1_15:37328933-37390391:-|nuORF;MEIS2|p.K275Nfs*12|1|0.27|ENSG00000134138|chr15:37036889-37036889|T/-|frameshift_variant;MEIS2|p.P84Rfs*6|1|0.17|ENSG00000134138|chr15:37096425-37096425|G/-|frameshift_variant;nc|ENSG00000134138|O14770-2|MEIS2;nc|ENSG00000134138|O14770-3|MEIS2;nc|ENSG00000134138|O14770-4|MEIS2;nc|ENSG00000134138|O14770-5|MEIS2;nc|ENSG00000134138|O14770-7|MEIS2;nc|ENSG00000134138|O14770-8|MEIS2	39.252832667884924	0.5560298534376815	1				NaN	NaN	0	NaN	4135	3812	7945
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7950	26.245	NaN	3164	30	0	694.95	0.106	+			40593	SVAGLSVTK	9	51	431.2557724426194	860.4969919520388	2	431.2550964355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVAGLSVTK_	ENSG00000197841|ENST00000492450|ZNF181;ZNF181|p.K248Sfs*36|1|0.29|ENSG00000197841|chr19:34741122-34741125|CAAA/-|frameshift_variant;ZNF181|p.V107Lfs*2|1|0.15|ENSG00000197841|chr19:34740695-34740695|A/-|frameshift_variant;ZNF181|p.Y52H|1|0.07|ENSG00000197841|chr19:34739546-34739546|T/C|missense_variant	49.536043120802724	0.308405419312776	1				NaN	NaN	0	NaN	4136	3812	7945
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7951	26.247	NaN	2146.4	30	0	781.4	0.038			+	2026	AKPETIHLQF	10	40	395.2202882844845	1182.6390354536536	3	395.22021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AKPETIHLQF_	REV__ENSG00000154358|ENST00000680850|OBSCN;REV__nc|ENSG00000154358|Q5VST9-2|OBSCN;REV__nc|ENSG00000154358|Q5VST9-3|OBSCN;REV__nc|ENSG00000154358|Q5VST9-5|OBSCN;REV__nc|ENSG00000154358|Q5VST9-6|OBSCN;REV__nc|ENSG00000154358|Q5VST9|OBSCN;REV__OBSCN|p.E4688Dfs*35|1|0.03|ENSG00000154358|chr1:228318105-228318106|-/CATCTTC|frameshift_variant;REV__OBSCN|p.E4729Rfs*7|1|0.37|ENSG00000154358|chr1:228318930-228318931|-/C|frameshift_variant;REV__OBSCN|p.G1702Vfs*37|2|0.36|ENSG00000154358|chr1:228268769-228268769|G/-|frameshift_variant;REV__OBSCN|p.H7050Tfs*22|1|0.11|ENSG00000154358|chr1:228371922-228371922|C/-|frameshift_variant;REV__OBSCN|p.P6994Lfs*78|1|0.15|ENSG00000154358|chr1:228371756-228371756|C/-|frameshift_variant;REV__OBSCN|p.S5232Ffs*24|1|0.21|ENSG00000154358|chr1:228332900-228332901|-/T|frameshift_variant;REV__OBSCN|p.V3709Sfs*15|1|0.03|ENSG00000154358|chr1:228293609-228293610|-/A|frameshift_variant	36.446750945000026	0.5818864909973037	1				NaN	NaN	0	NaN	4137	3812	7945
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7952	26.248	NaN	2228.2	30	0	315.05	0.141			+	-1	TSLMTLAKAL	10	37	355.53795829248844	1063.5920454776654	3	355.53802490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_TSLM(Oxidation (M))TLAKAL_	REV__ENST00000535325.5_1_3:45961332-45961530:-|nuORF	28.081489160057373	0.6505064946289502	1				NaN	NaN	0	NaN	4138	3812	7945
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7963	26.273	NaN	3164.1	30	0	572.39	0.214	+			42891	TEHEKVAIL	9	56	520.2926926004803	1038.5708322677606	2	520.2935791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEHEKVAIL_	ENSG00000142039|ENST00000269967|CCDC97	65.46538089061403	0.16805504838372562	1				NaN	NaN	0	NaN	4146	3815	7962
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7964	26.277	NaN	2955.9	30	0	307.77	0.106	+			22731	KVAVVLIQK	9	66	499.34238521982866	996.6702175064573	2	499.3427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVAVVLIQK_	ENSG00000168538|ENST00000334690|TRAPPC11;ENST00000509857.5_1_4:184585182-184595983:+|nuORF;nc|ENSG00000168538|Q7Z392-3|TRAPPC11;nc|ENSG00000168538|Q7Z392-4|TRAPPC11;TRAPPC11|p.T366Pfs*9|1|0.25|ENSG00000168538|chr4:183680246-183680246|A/-|frameshift_variant	46.45678178249821	0.34452392205506005	1				NaN	NaN	0	NaN	4147	3815	7962
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7965	26.279	NaN	3946.3	30	0	1012.2	0.106	+			4217	ATGDALLEK	9	64	459.25033957557855	916.4861262179571	2	459.2507629394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATGDALLEK_	ENSG00000108679|ENST00000262776|LGALS3BP;ENST00000586720.5_1_17:76967660-76975958:-|nuORF;ENST00000587251.5_1_17:76967660-76972124:-|nuORF	59.93077597824379	0.21419174904018318	1				NaN	NaN	0	NaN	4148	3815	7962
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7966	26.281	NaN	3872.4	30	0	667.75	0.106	+			33179	REVEARYAL	9	69	553.8014610242395	1105.588369115279	2	553.8021240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_REVEARYAL_	ENSG00000111057|ENST00000388835|KRT18;ENST00000411618.1_1_9:30799684-30799825:-|nuORF;ENST00000549078.5_1_12:53344429-53346127:+|nuORF	56.43379154798735	0.2433427591689151	1				NaN	NaN	0	NaN	4149	3815	7962
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7967	26.282	NaN	1844.8	30	0	406.48	0.106	+			45317	TVSEPAVIK	9	61	472.27634785351574	942.5381427738315	2	472.2765197753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TVSEPAVIK_	ENSG00000112339|ENST00000367837|HBS1L;ENST00000527005.5_1_6:135286419-135303731:-|nuORF;nc|ENSG00000112339|Q9Y450-4|HBS1L	47.657333605630114	0.33044192980041115	1				NaN	NaN	0	NaN	4150	3815	7962
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7968	26.284	NaN	774.06	30	0	114.42	0.035	+			43499	TGRAMLPHE	9	41	506.254150390625	NaN	0	506.254150390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TGRAMLPHE_	ENST00000318782.8_1_16:3022587-3022926:+|nuORF	27.882242232435846	0.3367954786602879	1				NaN	NaN	0	NaN	4151	3815	7962
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7969	26.285	NaN	1668.5	30	0	221.88	0.138			+	13436	GLGWVWAL	8	54	451.2510296546912	900.4875063761824	2	452.2571105957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GLGWVWAL_	REV__ENST00000292433.3_1_19:13265195-13265537:+|nuORF	24.504012794735996	0.7701314986472447	1				NaN	NaN	0	NaN	4152	3815	7962
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7983	26.316	NaN	2985.6	30	0	354.45	0.214			+	17733	IEPASKASAV	10	69	486.7717323019777	971.5289116707554	2	486.7716979980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IEPASKASAV_	REV__ENSG00000143107|ENST00000370017|FNDC7;REV__FNDC7|p.W183Ffs*14|1|0.06|ENSG00000143107|chr1:108718998-108718999|-/TTGTGTTACCAAA|frameshift_variant	71.87747018426188	0.26198133118427214	1				NaN	NaN	0	NaN	4163	3818	7982
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7984	26.32	NaN	1694.9	30	0	182.7	0.106	+			35144	SAIASTKVM	9	52	454.2493601778531	NaN	0	454.24932861328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAIASTKVM_	ENSG00000104442|ENST00000276569|ARMC1;nc|ENSG00000104442|Q9NVT9-2|ARMC1	51.19269402634007	0.19847346126499396	1				NaN	NaN	0	NaN	4164	3818	7982
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7985	26.322	NaN	1465.8	30	0	134.55	0.106				-1	FSDCKKSL	8	54	492.74468777251093	983.4748226118219	2	492.74505615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_FSDC(Carbamidomethyl (C))KKSL_	ENSG00000122882|ENST00000372979|ECD;nc|ENSG00000122882|O95905-2|ECD;nc|ENSG00000122882|O95905-3|ECD	60.97194046774394	0.49215940876911696	1				NaN	NaN	0	NaN	4165	3818	7982
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7986	26.324	NaN	5656.8	30	0	1293.2	0.039			+	-1	LSIMSFFLVVA	11	51	414.89791641185104	1241.6719198357532	3	414.8986511230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_LSIM(Oxidation (M))SFFLVVA_	REV__ENSG00000119820|ENST00000238831|YIPF4	31.634271133179894	0.6579734920221648	1				NaN	NaN	0	NaN	4166	3818	7982
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7996	26.347	NaN	20865	30	0	16287	0.214				-1	 	0	40	322.1934911872774	642.3724294413548	2	322.193603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	4173	3821	7995
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7997	26.351	NaN	3226.8	30	0	1200.4	0.106	+			40180	STQTALTLK	9	52	481.77850192195183	961.5424509107037	2	481.7791442871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STQTALTLK_	ENSG00000172123|ENST00000304905|SLFN12;SLFN12|p.V491Cfs*4|1|0.28|ENSG00000172123|chr17:35411605-35411605|T/-|frameshift_variant	76.16968421966216	0.11411088698345859	1				NaN	NaN	0	NaN	4174	3821	7995
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7998	26.353	NaN	1609.3	30	0	199.08	0.106			+	-1	SSYINCII	8	50	485.2388051190665	968.463057304933	2	485.2392272949219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SSYINC(Carbamidomethyl (C))II_	REV__ENST00000557508.5_1_14:58738596-58738665:+|nuORF	31.954861631926434	0.7126016770032289	1				NaN	NaN	0	NaN	4175	3821	7995
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7999	26.355	NaN	1060.6	30	0	154.92	0.037	+			37412	SLGIEVLSKQG	11	54	565.8241302845798	1129.6337076359596	2	565.8255615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLGIEVLSKQG_	ENSG00000131067|ENST00000336431|GGT7;GGT7|p.Q511Lfs*16|1|0.11|ENSG00000131067|chr20:34852210-34852211|-/TCTAGTATAA|frameshift_variant;nc|ENSG00000131067|Q9UJ14-4|GGT7;nc|ENSG00000131067|Q9UJ14-5|GGT7	48.18798116849167	0.44590646720473764	1				NaN	NaN	0	NaN	4176	3821	7995
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8010	26.378	NaN	869.46	30	0	90.718	0.214				-1	WMTSIFIA	8	49	492.74468777251093	983.4748226118219	2	492.7443542480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_WM(Oxidation (M))TSIFIA_	ARAP2|p.E1538A|1|0.34|ENSG00000047365|chr4:36073819-36073819|T/G|missense_variant;ENSG00000047365|ENST00000303965|ARAP2	35.200714571348534	0.6875396545722289	1				NaN	NaN	0	NaN	4184	3824	8009
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8011	26.382	NaN	2256	30	0	347.47	0.035	+			38934	SSQNFTLTK	9	60	513.2660679985368	1024.5175830638734	2	513.2659912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSQNFTLTK_	CCNJL|p.V393Rfs*8|1|0.23|ENSG00000135083|chr5:160253509-160253510|-/G|frameshift_variant;ENSG00000135083|ENST00000257536|CCNJL;ENST00000377503.6_1_5:159681329-159707642:-|nuORF;nc|ENSG00000135083|Q8IV13|CCNJL	56.632244143249146	0.24168844994051353	1				NaN	NaN	0	NaN	4185	3824	8009
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8023	26.408	NaN	3619.2	30	0	1559.5	0.214			+	438	AAVEKGVETK	10	61	516.2888277997164	1030.5631026662327	2	516.2900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAVEKGVETK_	REV__APPL2|p.K407Nfs*11|1|0.39|ENSG00000136044|chr12:105195281-105195281|T/-|frameshift_variant;REV__ENSG00000136044|ENST00000258530|APPL2;REV__ENST00000547809.5_1_12:105570964-105626916:-|nuORF;REV__ENST00000549573.5_1_12:105591633-105601793:-|nuORF;REV__ENST00000549974.5_1_12:105593149-105601775:-|nuORF;REV__nc|ENSG00000136044|Q8NEU8-2|APPL2;REV__nc|ENSG00000136044|Q8NEU8-3|APPL2	42.86426827375447	0.522752283233888	1				NaN	NaN	0	NaN	4194	3827	8022
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8024	26.411	NaN	2049.4	30	0	367.42	0.106	+			44751	TTMTGTVLK	9	57	476.261765281345	NaN	0	476.2619323730469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTMTGTVLK_	ENSG00000167323|ENST00000526596|STIM1;ENST00000533445.1_1_11:4076769-4103426:+|nuORF;nc|ENSG00000167323|Q13586-2|STIM1;nc|ENSG00000167323|Q13586|STIM1	52.936696900407355	0.1864545979552969	1				NaN	NaN	0	NaN	4195	3827	8022
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8025	26.413	NaN	2850.3	30	0	734.21	0.106			+	20263	KENDYSITF	9	56	558.7640265498665	1115.5135001665328	2	558.7640991210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KENDYSITF_	REV__ENSG00000164465|ENST00000338728|DCBLD1;REV__nc|ENSG00000164465|Q8N8Z6-2|DCBLD1	79.71258880314673	0.09879134589249085	1				NaN	NaN	0	NaN	4196	3827	8022
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8026	26.415	NaN	1044.6	30	0	124.25	0.106				-1	MALVRGLCCR	10	49	569.2873832205659	1136.5602135079316	2	569.28857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_M(Oxidation (M))ALVRGLCCR_	ENST00000403627.7_1_17:71204264-71204492:-|nuORF	21.9598887501803	0.7004979571547932	1				NaN	NaN	0	NaN	4197	3827	8022
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8027	26.417	NaN	1741.2	30	0	270.16	0.035				-1	LMSSCLYK	8	50	509.2400852556009	1016.4656175780018	2	509.276611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C),Oxidation (M)	_LM(Oxidation (M))SSC(Carbamidomethyl (C))LYK_	tr|U7SLS3|U7SLS3_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01877PE=4SV=1	57.81127852772723	0.5234495074909924	1				NaN	NaN	0	NaN	4198	3827	8022
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8037	26.44	NaN	6053	30	0	1138.1	0.214			+	-1	MSTLKRMAM	9	42	372.8452033968304	1115.5137807906913	3	372.8455505371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	3 Oxidation (M)	_M(Oxidation (M))STLKRM(Oxidation (M))AM(Oxidation (M))_	REV__ENSG00000122735|ENST00000242317|DNAI1	27.882242232435846	0.5426732730940306	1				NaN	NaN	0	NaN	4205	3830	8036
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8038	26.444	NaN	1332.3	30	0	319.08	0.035	+			16681	HIRLTGAPL	9	44	489.2979872493411	976.5814215654822	2	489.7999267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HIRLTGAPL_	ENSG00000135622|ENST00000357877|SEMA4F;nc|ENSG00000135622|O95754-2|SEMA4F	33.921630207806714	0.48623198279849766	1				NaN	NaN	0	NaN	4206	3830	8036
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8049	26.469	NaN	4392.2	30	0	1159.9	0.214	+			5030	ATSEIFASK	9	59	477.25054042351604	952.4865279138321	2	477.25042724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSEIFASK_	ENSG00000005810|ENST00000544440|MYCBP2;MYCBP2|p.C1064Ifs*31|1|0.09|ENSG00000005810|chr13:77211267-77211279|TTATCAGAAGGCA/-|frameshift_variant;MYCBP2|p.N1867Tfs*9|1|0.15|ENSG00000005810|chr13:77171572-77171572|T/-|frameshift_variant;MYCBP2|p.N3049*|1|0.11|ENSG00000005810|chr13:77097894-77097895|TT/-|frameshift_variant;MYCBP2|p.P4047Qfs*26|2|0.35|ENSG00000005810|chr13:77067782-77067782|G/-|frameshift_variant;MYCBP2|p.T1507Ffs*24|1|0.04|ENSG00000005810|chr13:77185189-77185190|-/TTGTAAA|frameshift_variant;MYCBP2|p.T4311Pfs*37|1|0.14|ENSG00000005810|chr13:77059619-77059619|G/-|frameshift_variant;MYCBP2|p.V3749*|1|0.12|ENSG00000005810|chr13:77081486-77081486|C/-|frameshift_variant;nc|ENSG00000005810|O75592-2|MYCBP2	80.45461616416974	0.09558281504443908	1				NaN	NaN	0	NaN	4214	3833	8048
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8050	26.473	NaN	2135	30	0	491.83	0.106	+			10449	EVLTENLR	8	53	487.26868853347406	972.5228241337481	2	487.2690734863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EVLTENLR_	ENSG00000131381|ENST00000253699|RBSN	51.33545320467046	0.5859736979383976	1				NaN	NaN	0	NaN	4215	3833	8048
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8051	26.475	NaN	2191.6	30	0	332.48	0.106	+			6434	AVYADSGNFK	10	63	536.2587247156499	1070.5028964980997	2	536.7611083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVYADSGNFK_	ENSG00000145780|ENST00000274457|FEM1C	75.04331003522576	0.23611669241777622	1				NaN	NaN	0	NaN	4216	3833	8048
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8052	26.476	NaN	3559.3	30	0	453.54	0.106	+			42369	TAINASRAL	9	65	458.76397193875846	915.5133909443169	2	458.76336669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TAINASRAL_	ENSG00000174373|ENST00000680220|RALGAPA1;ENST00000443361.1_1_9:108287470-108288637:+|nuORF;nc|ENSG00000174373|Q6GYQ0-2|RALGAPA1;nc|ENSG00000174373|Q6GYQ0-5|RALGAPA1;nc|ENSG00000174373|Q6GYQ0-6|RALGAPA1;nc|ENSG00000174373|Q6GYQ0-7|RALGAPA1;nc|ENSG00000174373|Q6GYQ0|RALGAPA1	72.87924865735499	0.12833875048249987	1				NaN	NaN	0	NaN	4217	3833	8048
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8053	26.478	NaN	1099	30	0	101.35	0.034			+	1196	AEPDGALLH	9	51	461.7342224121094	NaN	0	461.7342224121094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEPDGALLH_	REV__ENSG00000188747|ENST00000683555|NOXA1;REV__nc|ENSG00000188747|Q86UR1-2|NOXA1;REV__nc|ENSG00000188747|Q86UR1-3|NOXA1;REV__NOXA1|p.L249Sfs*66|1|0.4|ENSG00000188747|chr9:137431278-137431278|C/-|frameshift_variant	40.5726180659479	0.27166212580479165	1				NaN	NaN	0	NaN	4218	3833	8048
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8061	26.496	NaN	2430.3	30	0	271.25	0.215	+			8111	DYMKTTSNF	9	63	561.7420013221821	1121.469449711164	2	561.7420043945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_DYM(Oxidation (M))KTTSNF_	ENSG00000165525|ENST00000298310|NEMF;nc|ENSG00000165525|O60524-3|NEMF;nc|ENSG00000165525|O60524-4|NEMF;NEMF|p.K641Rfs*9|1|0.15|ENSG00000165525|chr14:49802721-49802721|T/-|frameshift_variant;NEMF|p.M879*|1|0.12|ENSG00000165525|chr14:49789558-49789558|T/-|frameshift_variant;NEMF|p.M879Nfs*10|1|0.13|ENSG00000165525|chr14:49789557-49789558|-/T|frameshift_variant	106.68306549817024	0.032382560583716295	1				NaN	NaN	0	NaN	4223	3836	8060
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8062	26.5	NaN	1181.9	30	0	336.99	0.106	+			25151	LLSNPHTLL	9	54	504.2983020796517	NaN	0	504.2980041503906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LLSNPHTLL_	ENSG00000196350|ENST00000601693|ZNF729	27.882242232435846	0.3367954786602879	1				NaN	NaN	0	NaN	4224	3836	8060
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8063	26.502	NaN	1270.5	30	0	208.13	0.106	+			13950	GSAFSTSISK	10	55	492.75327222063925	983.4919915080785	2	492.7535705566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GSAFSTSISK_	ENSG00000179115|ENST00000314606|FARSA;ENST00000592662.5_1_19:13039347-13044510:-|nuORF	45.02220120713402	0.5028680121232791	1				NaN	NaN	0	NaN	4225	3836	8060
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8064	26.504	NaN	5342.5	30	0	361.42	0.034				-1	 	0	64	483.76615321487446	965.517753496549	2	484.26776123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	4226	3836	8060
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8070	26.518	NaN	2075.4	30	0	513.23	0.214	+			9452	EKLTGPALM	9	57	480.2644348144531	NaN	0	480.2644348144531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EKLTGPALM_	ENSG00000197056|ENST00000359858|ZMYM1	45.97224482568171	0.23445038899310136	1				NaN	NaN	0	NaN	4229	3839	8069
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8071	26.522	NaN	1846.2	30	0	147.37	0.106	+			41690	SVSDLAPPR	9	51	471.25586198204746	940.497171030895	2	471.2561950683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVSDLAPPR_	ENSG00000166295|ENST00000299381|ANAPC16	71.87747018426188	0.13267044672804276	1				NaN	NaN	0	NaN	4230	3839	8069
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8072	26.524	NaN	1113.2	30	0	103.86	0.106	+			9106	EGKQKSKEL	9	47	523.7965366717858	NaN	0	523.7969360351562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EGKQKSKEL_	ENSG00000073614|ENST00000399788|KDM5A;nc|ENSG00000073614|P29375-2|KDM5A	28.081489160057373	0.33578952234132536	1				NaN	NaN	0	NaN	4231	3839	8069
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8073	26.526	NaN	980.75	30	0	157.61	0.033			+	45400	TVTVNLVQ	8	44	437.25582316270635	NaN	0	437.25543212890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TVTVNLVQ_	REV__ENSG00000126231|ENST00000375547|PROZ;REV__nc|ENSG00000126231|P22891-2|PROZ	34.172542307311794	1.7418937515398478	1				NaN	NaN	0	NaN	4232	3839	8069
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8081	26.544	NaN	7110.8	30	0	621.38	0.214			+	23803	LCPARVSV	8	72	451.2510296546912	900.4875063761824	2	451.2528991699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_LC(Carbamidomethyl (C))PARVSV_	REV__ENST00000535372.1_1_6:160182454-160183030:-|nuORF;REV__ENST00000546087.5_2_6:160182454-160182694:-|nuORF	60.29395666154354	0.49887135096048313	1				NaN	NaN	0	NaN	4237	3842	8080
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8082	26.547	NaN	4884.6	30	0	710.08	0.106	+			41691	SVSDLAPPR	9	57	471.25586198204746	940.497171030895	2	471.25567626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVSDLAPPR_	ENSG00000166295|ENST00000299381|ANAPC16	69.6276240434122	0.14239879520340665	1				NaN	NaN	0	NaN	4238	3842	8080
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8083	26.549	NaN	6629.1	30	0	2264.3	0.106	+			14529	GTDRTGFTFK	10	53	377.19257315429104	1128.555890063073	3	377.5270080566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTDRTGFTFK_	ENSG00000100297|ENST00000216122|MCM5	36.31764250033197	0.5830761606467809	1				NaN	NaN	0	NaN	4239	3842	8080
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8084	26.551	NaN	1307	30	0	196.72	0.106	+			49431	VVVDRKDLG	9	46	500.7909200734241	NaN	0	500.7877197265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVVDRKDLG_	ENST00000519973.5_1_8:23429536-23429629:+|nuORF	27.882242232435846	0.3367954786602879	1				NaN	NaN	0	NaN	4240	3842	8080
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8085	26.553	NaN	2372	30	0	196.66	0.035			+	30480	QAERLEQI	8	68	493.76648849063423	985.5184240480685	2	493.7666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QAERLEQI_	REV__ENSG00000204713|ENST00000377199|TRIM27;REV__nc|ENSG00000204713|P14373-2|TRIM27;REV__TRIM27|p.E352Rfs*24|1|0.35|ENSG00000204713|chr6:28904559-28904559|G/-|frameshift_variant	116.90359126533652	0.23898233959989007	1				NaN	NaN	0	NaN	4241	3842	8080
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8094	26.575	NaN	11253	30	0	4871.7	0.214	+			30842	QEGAKMAVRL	10	48	368.2059200236768	1101.5959306712305	3	368.2060852050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QEGAKMAVRL_	CTNNB1|p.L301Hfs*16|1|0.05|ENSG00000168036|chr3:41225827-41225831|TTCAA/-|frameshift_variant;ENSG00000168036|ENST00000349496|CTNNB1;ENSG00000173801|ENST00000393931|JUP	38.753607047826485	0.5606299674732264	1				NaN	NaN	0	NaN	4247	3845	8093
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8095	26.578	NaN	2571.8	30	0	418.31	0.106	+			38173	SQCEFSMGK	9	62	537.2233744516267	NaN	0	537.22314453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SQC(Carbamidomethyl (C))EFSMGK_	ENSG00000163634|ENST00000295899|THOC7;ENST00000487570.1_1_3:63824036-63825384:-|nuORF;THOC7|p.M198Ifs*5|1|0.05|ENSG00000163634|chr3:63834152-63834153|CC/-|frameshift_variant;THOC7|p.N115Kfs*6|1|0.12|ENSG00000163634|chr3:63837983-63837984|-/T|frameshift_variant;THOC7|p.Q105Afs*16|1|0.29|ENSG00000163634|chr3:63838016-63838017|-/T|frameshift_variant	70.39856735676683	0.10496893946726124	1				NaN	NaN	0	NaN	4248	3845	8093
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8096	26.58	NaN	6844.4	30	0	2598.2	0.106	+			35565	SAWWGPGGRR	10	51	377.19257315429104	1128.555890063073	3	377.19244384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAWWGPGGRR_	ENST00000582668.1_1_17:73267497-73269738:+|nuORF;ENST00000585075.1_1_17:73267491-73267800:+|nuORF	33.921630207806714	0.6028135429846169	1				NaN	NaN	0	NaN	4249	3845	8093
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8097	26.582	NaN	1774.4	30	0	432.07	0.106			+	11807	FSSFGAYM	8	42	455.19370755387746	908.3728621745549	2	455.19427490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FSSFGAYM_	REV__ENSG00000171522|ENST00000302472|PTGER4	21.70233525837049	0.7917639344264583	1				NaN	NaN	0	NaN	4250	3845	8093
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8098	26.584	NaN	2237.8	30	0	166.41	0.106			+	47794	VSIEKRLE	8	60	487.2874987892467	972.5604446452934	2	487.2877502441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSIEKRLE_	REV__CACNA1B|p.P2044Lfs*125|1|0.41|ENSG00000148408|chr9:138120261-138120261|C/-|frameshift_variant;REV__ENSG00000148408|ENST00000371372|CACNA1B;REV__nc|ENSG00000148408|Q00975-2|CACNA1B	56.72105179125745	0.5342425954139568	1				NaN	NaN	0	NaN	4251	3845	8093
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8099	26.586	NaN	2384.5	30	0	417.12	0.106			+	32117	QSKIQEVV	8	56	465.7659410638172	929.5173291944344	2	465.76580810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QSKIQEVV_	REV__ENSG00000137822|ENST00000564079|TUBGCP4;REV__nc|ENSG00000137822|Q9UGJ1|TUBGCP4;REV__TUBGCP4|p.L165Cfs*66|1|0.06|ENSG00000137822|chr15:43380129-43380129|G/-|frameshift_variant	38.80614096846853	0.6637206697844082	1				NaN	NaN	0	NaN	4252	3845	8093
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8100	26.587	NaN	2245	30	0	153.52	0.034			+	29836	PLAGDQHW	8	57	462.22195329689373	922.4293536605875	2	462.2221374511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PLAGDQHW_	REV__ENSG00000148396|ENST00000684901|SEC16A;REV__nc|ENSG00000148396|O15027-2|SEC16A;REV__nc|ENSG00000148396|O15027-3|SEC16A;REV__nc|ENSG00000148396|O15027-4|SEC16A;REV__nc|ENSG00000148396|O15027-5|SEC16A;REV__SEC16A|p.P2155Hfs*25|1|0.25|ENSG00000148396|chr9:136447664-136447664|G/-|frameshift_variant	49.44154591367651	0.597725784090933	1				NaN	NaN	0	NaN	4253	3845	8093
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8107	26.605	NaN	3784.9	30	0	337.46	0.214			+	-1	LRDMPQVTT	9	70	538.7732398327447	1075.5319267322893	2	538.774169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LRDM(Oxidation (M))PQVTT_	REV__ENSG00000089225|ENST00000405440|TBX5;REV__nc|ENSG00000089225|Q99593-3|TBX5;REV__TBX5|p.E486*|1|0.4|ENSG00000089225|chr12:114355634-114355635|-/G|frameshift_variant	32.75053402867276	0.49717649897795874	1				NaN	NaN	0	NaN	4257	3848	8106
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8108	26.609	NaN	8382.1	30	0	4114.9	0.106	+			14195	GSSASLVLK	9	51	431.25541235077395	860.4962717683479	2	431.25537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSSASLVLK_	ENSG00000075415|ENST00000552981|SLC25A3;ENST00000546766.5_1_12:98989476-98995303:+|nuORF;ENST00000547869.1_1_12:98994914-98995303:+|nuORF;ENST00000551123.5_1_12:98989412-98995303:+|nuORF;nc|ENSG00000075415|Q00325|SLC25A3	95.81516180277367	0.04847050768394289	1				NaN	NaN	0	NaN	4258	3848	8106
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8109	26.611	NaN	5264.5	30	0	716.45	0.106	+			29318	NYQNVVHKL	9	45	372.2047197949207	1113.5923299849621	3	372.20489501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NYQNVVHKL_	ENSG00000146463|ENST00000314607|ZMYM4;nc|ENSG00000146463|Q5VZL5-2|ZMYM4;nc|ENSG00000146463|Q5VZL5-3|ZMYM4;nc|ENSG00000146463|Q5VZL5-4|ZMYM4;ZMYM4|p.A956Sfs*68|1|0.38|ENSG00000146463|chr1:35393690-35393691|-/A|frameshift_variant;ZMYM4|p.D1229Ifs*2|1|0.12|ENSG00000146463|chr1:35405175-35405175|G/-|frameshift_variant;ZMYM4|p.N1222Kfs*15|1|0.25|ENSG00000146463|chr1:35405154-35405155|-/A|frameshift_variant;ZMYM4|p.Y806Ifs*12|1|0.16|ENSG00000146463|chr1:35389058-35389059|-/A|frameshift_variant	31.529811441608018	0.5085848003137583	1				NaN	NaN	0	NaN	4259	3848	8106
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8110	26.613	NaN	2336.1	30	0	412.99	0.106	+			10717	FACPILRQ	8	60	474.2611146344154	NaN	0	474.2611083984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FACPILRQ_	ENSG00000145916|ENST00000313386|RMND5B;ENSG00000153561|ENST00000283632|RMND5A;ENST00000507937.1_1_5:177574516-177575030:+|nuORF;ENST00000515360.5_1_5:177569546-177575030:+|nuORF;nc|ENSG00000145916|Q96G75-2|RMND5B	44.53106598305862	1.7418937515398478	1				NaN	NaN	0	NaN	4260	3848	8106
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8111	26.614	NaN	2476	30	0	436.83	0.106	+			27035	LYVNTCPGQ	9	55	497.73664323173836	993.4587335302767	2	497.7373962402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LYVNTCPGQ_	ENSG00000198917|ENST00000361256|SPOUT1	32.81241826257853	0.4965981579233955	1				NaN	NaN	0	NaN	4261	3848	8106
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8112	26.616	NaN	1483.3	30	0	222.76	0.036			+	9885	EQLAQAALVSS	11	59	558.7981984998758	1115.5818440665514	2	558.7994995117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EQLAQAALVSS_	REV__tr|U7SWT6|U7SWT6_FUSNUOrotatephosphoribosyltransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=pyrEPE=3SV=1	59.93077597824379	0.32407304095777845	1				NaN	NaN	0	NaN	4262	3848	8106
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8113	26.617	NaN	1725.2	30	0	325.94	0.145	+			33590	RLMSLPIAKK	10	43	386.24569784371715	NaN	0	386.24530029296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RLMSLPIAKK_	ENSG00000198663|ENST00000480824|C6orf89;nc|nan|Q6UWU4-2|C6orf89	55.08391021199286	0.27346126051334796	1				NaN	NaN	0	NaN	4263	3848	8106
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8124	26.644	NaN	5644.9	30	0	1006.6	0.214			+	11151	FGIMKKTSY	9	78	537.7876611111768	1073.5607692891535	2	537.7885131835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FGIMKKTSY_	REV__ENSG00000124568|ENST00000244527|SLC17A1;REV__nc|ENSG00000124568|Q14916-2|SLC17A1	79.45101966838831	0.09992237243120712	1				NaN	NaN	0	NaN	4271	3851	8123
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8125	26.648	NaN	2029.2	30	0	267.99	0.106				-1	NLYALACY	8	57	494.23376802949065	986.4529831257813	2	494.2340087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_NLYALAC(Carbamidomethyl (C))Y_	ENSG00000137473|ENST00000325106|TTC29;nc|ENSG00000137473|Q8NA56-2|TTC29;TTC29|p.Y300Vfs*20|1|0.42|ENSG00000137473|chr4:146833882-146833885|AGTA/-|frameshift_variant	46.76643321282427	0.6143254112625767	1				NaN	NaN	0	NaN	4272	3851	8123
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8126	26.65	NaN	1373.5	30	0	354.32	0.106	+			28519	NIEFITAGG	9	51	461.2375897148325	920.460626496465	2	461.23828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NIEFITAGG_	ENSG00000145555|ENST00000513610|MYO10;MYO10|p.G1223Rfs*28|1|0.25|ENSG00000145555|chr5:16694504-16694505|-/T|frameshift_variant;MYO10|p.I417Tfs*39|1|0.05|ENSG00000145555|chr5:16764326-16764327|-/ACAAATCTCTG|frameshift_variant;MYO10|p.N507Qfs*30|1|0.11|ENSG00000145555|chr5:16762613-16762614|-/TG|frameshift_variant;MYO10|p.S468Ffs*8|1|0.05|ENSG00000145555|chr5:16763679-16763680|-/A|frameshift_variant	32.81241826257853	0.4965981579233955	1				NaN	NaN	0	NaN	4273	3851	8123
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8127	26.651	NaN	1252.2	30	0	310.04	0.106	+			14357	GTAASVSFMF	10	54	509.2400852556009	1016.4656175780018	2	509.2407531738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTAASVSFMF_	ENSG00000140279|ENST00000389039|DUOX2;nc|ENSG00000140279|Q9NRD8|DUOX2	29.14955571784316	0.6417842315402807	1				NaN	NaN	0	NaN	4274	3851	8123
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8128	26.653	NaN	2031	30	0	652.46	0.038	+			13094	GFYHGLSSTLL	11	41	597.8118698878008	1193.6091868424014	2	597.8130493164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GFYHGLSSTLL_	ENSG00000102743|ENST00000338625|SLC25A15;ENSG00000120329|ENST00000239451|SLC25A2	35.17822180527639	0.6208003396870814	1				NaN	NaN	0	NaN	4275	3851	8123
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8139	26.678	NaN	4277.6	30	0	847.16	0.214				-1	LTKKMRDML	9	40	384.54617086649034	1150.6166831996711	3	384.5466613769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LTKKM(Oxidation (M))RDML_	tr|U7SIN9|U7SIN9_FUSNUV-typeprotonATPasesubunitEOS=FusobacteriumnucleatumCTI-5OX=1316586GN=atpEPE=3SV=1	20.94693142431847	0.6074874384046576	1				NaN	NaN	0	NaN	4283	3854	8138
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8140	26.682	NaN	743.65	30	0	94.892	0.037	+			34596	RVMQDIVYK	9	45	576.3154791637756	1150.6164053943512	2	576.3160400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RVMQDIVYK_	ENSG00000115289|ENST00000233630|PCGF1;ENST00000475863.5_1_2:74732272-74734286:-|nuORF;ENST00000480844.2_1_2:74732736-74734502:-|nuORF;ENST00000496911.1_1_2:74733844-74734286:-|nuORF;nc|ENSG00000115289|Q9BSM1-3|PCGF1	38.753607047826485	0.4348790777924195	1				NaN	NaN	0	NaN	4284	3854	8138
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8148	26.702	NaN	10604	30	0	4333.4	0.214				-1	GTLMWHQMK	9	47	383.1838972089284	1146.5298622269852	3	383.184326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_GTLM(Oxidation (M))WHQMK_	ENST00000346169.6_1_3:184032401-184033585:+|nuORF;ENST00000352767.7_2_3:184032446-184033585:+|nuORF	32.81241826257853	0.4965981579233955	1				NaN	NaN	0	NaN	4289	3857	8147
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8149	26.706	NaN	1829.5	30	0	239.07	0.106			+	32994	REESGEPKVV	10	52	565.2957082227487	1128.5768635122972	2	565.2960815429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_REESGEPKVV_	REV__ENST00000371857.7_1_10:90751224-90770455:+|nuORF;REV__ENST00000466081.5_1_10:90751224-90770411:+|nuORF	28.081489160057373	0.6505064946289502	1				NaN	NaN	0	NaN	4290	3857	8147
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8150	26.707	NaN	858.27	30	0	658.74	0.106				-1	 	0	13	322.1934911872774	642.3724294413548	2	322.1934814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	4291	3857	8147
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8151	26.709	NaN	5915.9	30	0	2900.2	0.106	+			45054	TVGTFGVTAVS	11	54	519.7765246456325	1037.538496358065	2	519.7774047851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TVGTFGVTAVS_	ENSG00000094975|ENST00000263688|SUCO;nc|ENSG00000094975|Q9UBS9-2|SUCO	30.317721548370564	0.6717830234747728	1				NaN	NaN	0	NaN	4292	3857	8147
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8152	26.711	NaN	1836.6	30	0	329.1	0.106			+	37761	SLVLSVQPGS	10	56	493.77947010917165	985.5443872851433	2	493.7787170410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SLVLSVQPGS_	REV__CD177|p.R341Efs*2|1|0.1|ENSG00000204936|chr19:43361514-43361514|C/-|frameshift_variant;REV__ENSG00000204936|ENST00000618265|CD177;REV__nc|ENSG00000204936|Q8N6Q3-2|CD177;REV__nc|ENSG00000204936|Q8N6Q3-3|CD177;REV__nc|ENSG00000204936|Q8N6Q3|CD177	37.81151784470057	0.569310847604193	1				NaN	NaN	0	NaN	4293	3857	8147
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8153	26.713	NaN	2015	30	0	210.53	0.106			+	29946	PMSIKPMK	8	54	466.2578194187291	930.5010859042583	2	466.2581787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PMSIKPMK_	REV__AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;REV__AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;REV__AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;REV__ENSG00000124942|ENST00000378024|AHNAK;REV__ENSG00000124942|ENST00000378024|AHNAK;REV__ENSG00000124942|ENST00000378024|AHNAK	45.9519527083369	0.6193794311207887	1				NaN	NaN	0	NaN	4294	3857	8147
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8154	26.715	NaN	1182.1	30	0	149.22	0.034	+			35512	SAVDPVQMK	9	49	487.75222657654564	973.4899002198913	2	487.7524108886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SAVDPVQMK_	ENSG00000136758|ENST00000376016|YME1L1;ENST00000463270.1_1_10:27418274-27425210:-|nuORF;nc|ENSG00000136758|Q96TA2-3|YME1L1;nc|ENSG00000136758|Q96TA2|YME1L1	51.19269402634007	0.2889735674168909	1				NaN	NaN	0	NaN	4295	3857	8147
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8164	26.738	NaN	4730	30	0	675.9	0.214			+	2365	ANDIQLVANA	10	63	514.7719154043618	1027.5292778755236	2	514.7720947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ANDIQLVANA_	REV__CON__Q7Z3Z0;REV__ENSG00000204897|ENST00000312150|KRT25	49.536043120802724	0.461275219792494	1				NaN	NaN	0	NaN	4302	3860	8163
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8165	26.742	NaN	1985.5	30	0	289.84	0.106	+			5624	AVCYQAITK	9	60	527.2731398573376	1052.531726781475	2	527.2738037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_AVC(Carbamidomethyl (C))YQAITK_	ENSG00000140632|ENST00000321919|GLYR1;nc|ENSG00000140632|Q49A26-3|GLYR1;nc|ENSG00000140632|Q49A26-4|GLYR1;nc|ENSG00000140632|Q49A26-5|GLYR1	80.45461616416974	0.09558281504443908	1				NaN	NaN	0	NaN	4303	3860	8163
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8166	26.744	NaN	1885.7	30	0	261.86	0.106	+			27525	MPADTNKAF	9	55	497.73664323173836	993.4587335302767	2	497.7367248535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MPADTNKAF_	ENSG00000125037|ENST00000245046|EMC3;ENST00000487465.5_1_3:10011273-10028351:-|nuORF;nc|ENSG00000125037|Q9P0I2-2|EMC3	56.43379154798735	0.2433427591689151	1				NaN	NaN	0	NaN	4304	3860	8163
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8167	26.745	NaN	1958.7	30	0	351.24	0.036			+	24594	LGQARVYGPN	10	59	537.7876611111768	1073.5607692891535	2	537.7868041992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LGQARVYGPN_	REV__BRINP2|p.L486R|1|0.34|ENSG00000198797|chr1:177280633-177280633|T/G|missense_variant	34.172542307311794	0.6007644933930345	1				NaN	NaN	0	NaN	4305	3860	8163
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8176	26.765	NaN	1844.8	30	0	288.4	0.143			+	31118	QFTPAEDNV	9	57	510.73603319156	1019.45751344992	2	510.7361755371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QFTPAEDNV_	REV__DCHS1|p.G2765Rfs*10|1|0.26|ENSG00000166341|chr11:6623383-6623384|-/T|frameshift_variant;REV__DCHS1|p.H2834Sfs*7|1|0.44|ENSG00000166341|chr11:6623177-6623178|-/C|frameshift_variant;REV__ENSG00000166341|ENST00000299441|DCHS1	37.81151784470057	0.4459294069877048	1				NaN	NaN	0	NaN	4311	3863	8175
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8183	26.785	NaN	2533.3	30	0	282.64	0.145	+			6643	AYVHMVTHF	9	61	560.7654235349232	1119.5162941366464	2	560.7665405273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_AYVHM(Oxidation (M))VTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	65.80317337860623	0.1652391959156183	1				NaN	NaN	0	NaN	4315	3866	8182
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8191	26.807	NaN	2367.4	30	0	468.31	0.214			+	10416	EVHALRHM	8	67	496.75737536974435	991.5001978062887	2	496.75762939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EVHALRHM_	REV__ENSG00000138101|ENST00000406818|DTNB;REV__ENST00000493386.5_1_2:25799670-25819155:-|nuORF;REV__nc|ENSG00000138101|O60941-2|DTNB;REV__nc|ENSG00000138101|O60941-3|DTNB;REV__nc|ENSG00000138101|O60941-4|DTNB;REV__nc|ENSG00000138101|O60941-5|DTNB;REV__nc|ENSG00000138101|O60941-6|DTNB;REV__nc|ENSG00000138101|O60941-7|DTNB	44.53106598305862	0.628196326904373	1				NaN	NaN	0	NaN	4320	3869	8190
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8192	26.811	NaN	1695.4	30	0	245.82	0.106	+			23095	KVVEGSFVYK	10	56	578.323793391743	1154.633033850286	2	578.3248291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVVEGSFVYK_	ENSG00000203879|ENST00000447750|GDI1;ENST00000491154.1_1_X:153666748-153668487:+|nuORF	85.92353377893507	0.15441247375292388	1				NaN	NaN	0	NaN	4321	3869	8190
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8193	26.813	NaN	2368.4	30	0	518.35	0.106	+			43663	TIYNAAIQK	9	56	511.2871494997031	1020.5597460662062	2	511.2874755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TIYNAAIQK_	ENSG00000164169|ENST00000322396|PRMT9;nc|ENSG00000164169|Q6P2P2-2|PRMT9	51.19269402634007	0.2889735674168909	1				NaN	NaN	0	NaN	4322	3869	8190
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8194	26.815	NaN	1822	30	0	197.4	0.036	+			27702	MPYSHPSSY	9	58	534.7263250698237	1067.4380972064473	2	534.7283935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MPYSHPSSY_	ENSG00000164190|ENST00000282516|NIPBL;ENST00000504430.5_1_5:36961623-36995905:+|nuORF;nc|ENSG00000164190|Q6KC79-2|NIPBL;nc|ENSG00000164190|Q6KC79-3|NIPBL;NIPBL|p.F1423Lfs*15|1|0.43|ENSG00000164190|chr5:37008032-37008032|T/-|frameshift_variant;NIPBL|p.I2776Lfs*3|1|0.17|ENSG00000164190|chr5:37064797-37064797|A/-|frameshift_variant;NIPBL|p.K603Sfs*11|2|0.29|ENSG00000164190|chr5:36984981-36984981|A/-|frameshift_variant;NIPBL|p.L2220Ffs*3|1|0.21|ENSG00000164190|chr5:37048567-37048568|-/T|frameshift_variant;NIPBL|p.R505Efs*35|1|0.19|ENSG00000164190|chr5:36984687-36984687|A/-|frameshift_variant	119.55681237560556	0.021468056596162587	1				NaN	NaN	0	NaN	4323	3869	8190
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8203	26.836	NaN	2546.3	30	0	276.08	0.214	+			1510	AGAAVLPVK	9	53	413.2630438865695	824.511534839939	2	413.2632751464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AGAAVLPVK_	ENSG00000178691|ENST00000322652|SUZ12	85.35947970620816	0.07794846947388434	1				NaN	NaN	0	NaN	4329	3872	8202
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8204	26.84	NaN	1976.5	30	0	587.83	0.106			+	18213	INARPEGVV	9	51	477.77169566804736	953.5288384028947	2	477.771728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_INARPEGVV_	REV__ENSG00000179580|ENST00000569714|RNF151	32.81241826257853	0.4965981579233955	1				NaN	NaN	0	NaN	4330	3872	8202
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8205	26.842	NaN	1314.4	30	0	141.79	0.106			+	47855	VSLEKQDK	8	58	473.7631994118349	NaN	0	473.7632141113281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSLEKQDK_	REV__ENSG00000152818|ENST00000367545|UTRN;REV__nc|ENSG00000152818|P46939-2|UTRN;REV__UTRN|p.G3160*|1|0.03|ENSG00000152818|chr6:144821001-144821002|AG/-|frameshift_variant;REV__UTRN|p.K1847Ffs*66|1|0.07|ENSG00000152818|chr6:144516945-144516946|-/TTTAA|frameshift_variant;REV__UTRN|p.K951Rfs*32|2|0.22|ENSG00000152818|chr6:144461335-144461335|A/-|frameshift_variant;REV__UTRN|p.L985Wfs*4|1|0.07|ENSG00000152818|chr6:144462753-144462754|-/GGGC|frameshift_variant;REV__UTRN|p.R3003Pfs*5|1|0.27|ENSG00000152818|chr6:144793915-144793916|-/C|frameshift_variant;REV__UTRN|p.T2422Hfs*35|1|0.47|ENSG00000152818|chr6:144557282-144557282|A/-|frameshift_variant	37.81151784470057	1.7418937515398478	1				NaN	NaN	0	NaN	4331	3872	8202
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8206	26.844	NaN	1963.3	30	0	456.5	0.106	+			26016	LSLDQSTWN	9	54	532.2560653632402	1062.4975777932802	2	532.2567138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSLDQSTWN_	ENSG00000121210|ENST00000409959|TMEM131L;nc|ENSG00000121210|A2VDJ0-2|TMEM131L;nc|ENSG00000121210|A2VDJ0-3|TMEM131L;nc|ENSG00000121210|A2VDJ0-6|TMEM131L;nc|ENSG00000121210|A2VDJ0|TMEM131L	40.77816245573522	0.41113185337114944	1				NaN	NaN	0	NaN	4332	3872	8202
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8207	26.845	NaN	2063.9	30	0	361.72	0.033			+	16760	HLVGAVVR	8	51	425.7661513555158	849.5177497778316	2	425.7662048339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HLVGAVVR_	REV__ENSG00000196586|ENST00000369977|MYO6;REV__nc|ENSG00000196586|Q9UM54-2|MYO6;REV__nc|ENSG00000196586|Q9UM54-4|MYO6;REV__nc|ENSG00000196586|Q9UM54-5|MYO6;REV__nc|ENSG00000196586|Q9UM54-6|MYO6;REV__nc|ENSG00000196586|Q9UM54|MYO6	35.200714571348534	0.6875396545722289	1				NaN	NaN	0	NaN	4333	3872	8202
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8217	26.869	NaN	1494.3	30	0	198.01	0.214			+	23857	LDEDVTLR	8	49	480.7531346413094	NaN	0	480.7530517578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LDEDVTLR_	REV__ENSG00000119698|ENST00000304338|PPP4R4;REV__ENST00000555690.5_1_14:94640802-94696957:+|nuORF;REV__nc|ENSG00000119698|Q6NUP7-2|PPP4R4;REV__PPP4R4|p.S250Vfs*7|1|0.39|ENSG00000119698|chr14:94237577-94237577|A/-|frameshift_variant;REV__PPP4R4|p.T186Nfs*8|1|0.1|ENSG00000119698|chr14:94233689-94233690|-/A|frameshift_variant	31.954861631926434	1.7418937515398478	1				NaN	NaN	0	NaN	4340	3875	8216
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8218	26.872	NaN	1018.9	30	0	351.38	0.106	+			47977	VSPGGGAL	8	26	329.18334304070135	656.3521331482027	2	329.1834716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSPGGGAL_	ENST00000591688.5_1_19:13875372-13879601:+|nuORF	14.664097394203935	0.7913966407026132	1				NaN	NaN	0	NaN	4341	3875	8216
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8219	26.874	NaN	1086.4	30	0	75.644	0.036			+	-1	KKHCPRAR	8	50	526.7968222541294	NaN	0	526.7964477539062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_KKHC(Carbamidomethyl (C))PRAR_	REV__AluSz6_dup36815|chr15:60362892-60363058:+|1.1099680225515125|0.0012375329650786|9.81|477.0|2|1|sense	26.79610172149135	1.7418937515398478	1				NaN	NaN	0	NaN	4342	3875	8216
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8230	26.9	NaN	5865	30	0	809.83	0.214	+			3437	ASQLVGIEK	9	60	472.7743215800975	943.534090226995	2	472.77392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASQLVGIEK_	ENSG00000077152|ENST00000646651|UBE2T	68.62578634547417	0.14673074753754126	1				NaN	NaN	0	NaN	4350	3878	8229
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8231	26.903	NaN	1885.7	30	0	333.44	0.036	+			25450	LPQGEKVQAM	10	58	550.7927841588316	1099.5710153844632	2	550.7933959960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LPQGEKVQAM_	ENSG00000135821|ENST00000331872|GLUL;ENST00000475808.5_1_1:182355349-182357923:-|nuORF;ENST00000489818.5_1_1:182354893-182357872:-|nuORF;ENST00000491322.1_1_1:182356257-182357923:-|nuORF	43.650786325866115	0.5155049133366767	1				NaN	NaN	0	NaN	4351	3878	8229
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8241	26.925	NaN	17858	30	0	4049.9	0.214	+			14308	GSYNKVFLAK	10	62	376.21325364725027	1125.6179315419508	3	376.21356201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSYNKVFLAK_	ENSG00000099341|ENST00000215071|PSMD8;ENST00000592001.5_1_19:38865430-38871817:+|nuORF	99.01295224348159	0.08062808246117298	1				NaN	NaN	0	NaN	4358	3881	8240
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8242	26.929	NaN	3232.4	30	0	1161.9	0.106	+			14150	GSMTVVTVK	9	55	461.2573238073083	920.5000946814166	2	461.2577819824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSMTVVTVK_	ENSG00000001461|ENST00000374399|NIPAL3;nc|ENSG00000001461|Q6P499-2|NIPAL3	68.84614121027924	0.14577793175421136	1				NaN	NaN	0	NaN	4359	3881	8240
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8243	26.931	NaN	12741	30	0	6485.6	0.106	+			2794	ARRSPWPLH	9	47	373.8766837492402	1118.6082218479207	3	373.8769836425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ARRSPWPLH_	GGTLC1|p.G130Afs*22|1|0.4|ENSG00000149435|chr20:23985890-23985890|C/-|frameshift_variant;GGTLC1|p.S94Hfs*58|1|0.35|ENSG00000149435|chr20:23986101-23986101|G/-|frameshift_variant	52.29916861842294	0.2778091507991977	1				NaN	NaN	0	NaN	4360	3881	8240
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8244	26.933	NaN	4050.2	30	0	832.46	0.106	+			14309	GSYNKVFLAK	10	69	563.8165941179462	1125.6186353026924	2	563.8177490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GSYNKVFLAK_	ENSG00000099341|ENST00000215071|PSMD8;ENST00000592001.5_1_19:38865430-38871817:+|nuORF	109.82975700811294	0.04850514657194457	1				NaN	NaN	0	NaN	4361	3881	8240
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8245	26.934	NaN	2187.1	30	0	809.25	0.106			+	9014	EGARLGPRGE	10	52	521.2772054921513	1040.5398580511026	2	521.2786865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EGARLGPRGE_	REV__ENST00000561543.5_1_15:52971390-52971552:-|nuORF	28.5767321226876	0.6464621404813697	1				NaN	NaN	0	NaN	4362	3881	8240
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8246	26.936	NaN	1031.5	30	0	108.61	0.035	+			23898	LDKIVHYL	8	53	500.793212890625	NaN	0	500.793212890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LDKIVHYL_	ENSG00000167037|ENST00000400358|SGSM1;ENST00000473458.5_1_22:25240737-25320238:+|nuORF;ENST00000480523.1_1_22:25240737-25320238:+|nuORF;nc|ENSG00000167037|Q2NKQ1-3|SGSM1;nc|ENSG00000167037|Q2NKQ1-3|SGSM1;nc|ENSG00000167037|Q2NKQ1|SGSM1;SGSM1|p.L535Pfs*6|1|0.09|ENSG00000167037|chr22:24879465-24879466|-/C|frameshift_variant	21.70233525837049	1.7418937515398478	1				NaN	NaN	0	NaN	4363	3881	8240
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8247	26.937	NaN	1591.6	30	0	179.29	0.138	+			34985	SAAPRTVAL	9	57	443.260777823804	884.507002714408	2	443.2607727050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SAAPRTVAL_	ENSG00000223865|ENST00000418931|HLA-DPB1;ENST00000469120.1_1_6:33043797-33048717:+|nuORF;HLA-DPB1|p.Q193Pfs*17|1|0.18|ENSG00000223865|chr6:33085156-33085157|-/C|frameshift_variant;HLA-DPB1|p.Q193Sfs*35|1|0.35|ENSG00000223865|chr6:33085157-33085157|C/-|frameshift_variant	44.377184641726394	0.36891676396732553	1				NaN	NaN	0	NaN	4364	3881	8240
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8258	26.964	NaN	10087	30	0	6072.1	0.214			+	25369	LPGLALVHAGQ	11	41	359.21345564526564	1074.618537535997	3	359.2133483886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LPGLALVHAGQ_	REV__ENSG00000129566|ENST00000262715|TEP1;REV__nc|ENSG00000129566|Q99973-2|TEP1;REV__TEP1|p.K1597Sfs*14|1|0.27|ENSG00000129566|chr14:20380448-20380448|T/-|frameshift_variant;REV__TEP1|p.V1856Lfs*45|3|0.41|ENSG00000129566|chr14:20378179-20378179|C/-|frameshift_variant	32.75053402867276	0.6462648045997152	1				NaN	NaN	0	NaN	4372	3884	8257
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8259	26.967	NaN	3543.6	30	0	498.7	0.106	+			1712	AGVPPPAWLPP	11	51	367.8732806068555	1100.5980124207665	3	367.87298583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AGVPPPAWLPP_	chr15:53523322-53540662|232|17.27|0.17|6.68|-|1|TE_info:L1PA2,L1PA2_dup4399,L1,LINE,donor,+,53540662,53546677|WDR72,None|100;chr15:53523322-53540975|258|15.88|0.17|6.53|-|ENST00000614174|WDR72,WDR72	33.921630207806714	0.6339809607503234	1				NaN	NaN	0	NaN	4373	3884	8257
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8260	26.969	NaN	2578.1	30	0	396.23	0.106			+	24485	LGGTAGAVVL	10	58	429.25824758967667	856.5019422461534	2	429.25811767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LGGTAGAVVL_	REV__FCRL4|p.A389V|1|0.38|ENSG00000163518|chr1:157581614-157581614|G/A|missense_variant	87.75429964447693	0.1439309699732727	1				NaN	NaN	0	NaN	4374	3884	8257
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8261	26.971	NaN	3724.2	30	0	1435.9	0.106			+	23017	KVSQNKMLK	9	67	538.3158985046504	1074.6172440761006	2	538.3173217773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KVSQNKMLK_	REV__ENST00000551520.1_1_12:57108141-57108210:-|nuORF;REV__ENST00000552540.5_2_12:57107337-57108468:-|nuORF	74.25504064058377	0.12238981753128622	1				NaN	NaN	0	NaN	4375	3884	8257
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8262	26.973	NaN	1526.3	30	0	124.73	0.106	+			12607	GEHVKAIEI	9	55	498.2796681800398	NaN	0	498.2797546386719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GEHVKAIEI_	ENSG00000163913|ENST00000348417|IFT122;ENST00000506507.5_1_3:129168750-129233481:+|nuORF;nc|ENSG00000163913|Q9HBG6-10|IFT122;nc|ENSG00000163913|Q9HBG6-11|IFT122;nc|ENSG00000163913|Q9HBG6-3|IFT122;nc|ENSG00000163913|Q9HBG6-4|IFT122;nc|ENSG00000163913|Q9HBG6-5|IFT122;nc|ENSG00000163913|Q9HBG6-6|IFT122;nc|ENSG00000163913|Q9HBG6-7|IFT122;nc|ENSG00000163913|Q9HBG6-8|IFT122;nc|ENSG00000163913|Q9HBG6-9|IFT122	75.04331003522576	0.0883683072398826	1				NaN	NaN	0	NaN	4376	3884	8257
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8263	26.975	NaN	802.67	30	0	62.436	0.035	+			51081	YLQLLVHP	8	43	491.7897173703562	981.5648818075124	2	491.7898864746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YLQLLVHP_	ENSG00000125755|ENST00000245934|SYMPK;SYMPK|p.G1014Afs*4|1|0.35|ENSG00000125755|chr19:45817999-45817999|C/-|frameshift_variant;SYMPK|p.S1168Pfs*46|1|0.35|ENSG00000125755|chr19:45816037-45816037|G/-|frameshift_variant	35.200714571348534	0.6875396545722289	1				NaN	NaN	0	NaN	4377	3884	8257
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8271	26.994	NaN	1417.3	30	0	178.3	0.214	+			12538	GEGDPRPEL	9	54	485.236903082601	NaN	0	485.2366943359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEGDPRPEL_	ENSG00000110237|ENST00000263674|ARHGEF17	49.536043120802724	0.20989033510253738	1				NaN	NaN	0	NaN	4382	3887	8270
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8272	26.998	NaN	4496.3	30	0	743.55	0.106			+	25741	LRWCGGLIPK	10	47	381.55530886395377	1141.6440971920613	3	381.5563049316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LRWCGGLIPK_	REV__ENST00000354249.8_2_16:2030177-2031410:-|nuORF;REV__ENST00000356120.8_2_16:2030177-2031410:-|nuORF	28.081489160057373	0.6505064946289502	1				NaN	NaN	0	NaN	4383	3887	8270
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8273	27	NaN	2258.8	30	0	648.94	0.106			+	-1	QPLLAMINT	9	53	508.7746156227303	1015.5346783122607	2	508.7752685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_QPLLAM(Oxidation (M))INT_	REV__ENSG00000168807|ENST00000336278|SNTB2	42.396135135203025	0.392153681582562	1				NaN	NaN	0	NaN	4384	3887	8270
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8274	27.002	NaN	1259.7	30	0	120.26	0.106	+			9219	EGSHPVLY	8	54	451.22476343705324	900.4349739409065	2	451.2257385253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EGSHPVLY_	ENST00000451507.1_1_20:3869003-3869189:-|nuORF	39.021493756699265	0.6623843612266921	1				NaN	NaN	0	NaN	4385	3887	8270
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8275	27.004	NaN	381.41	30	0	248.79	0.106				-1	 	0	18	344.2249854948597	686.4354180565194	2	344.2253112792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	4386	3887	8270
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8276	27.005	NaN	798.39	30	0	457.5	0.031			+	20611	KGDFTVSLGK	10	28	351.19650877025174	NaN	0	351.1966857910156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KGDFTVSLGK_	REV__ENSG00000183576|ENST00000331768|SETD3;REV__nc|ENSG00000183576|Q86TU7-2|SETD3;REV__nc|ENSG00000183576|Q86TU7-3|SETD3	16.71738777980365	0.4201028297492154	1				NaN	NaN	0	NaN	4387	3887	8270
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8277	27.006	NaN	1116.4	30	0	123.4	0.14			+	7688	DLIKKYVQ	8	59	503.8002459639758	NaN	0	503.80047607421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DLIKKYVQ_	REV__ENST00000460328.5_1_21:38468948-38469062:+|nuORF	31.954861631926434	1.7418937515398478	1				NaN	NaN	0	NaN	4388	3887	8270
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8288	27.033	NaN	3299	30	0	582.91	0.214	+			5841	AVIIVGSAK	9	53	429.27635580047723	NaN	0	429.27630615234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVIIVGSAK_	ENSG00000138074|ENST00000310574|SLC5A6;ENST00000464538.1_1_2:27428216-27429031:-|nuORF;ENST00000488743.6_1_2:27425876-27434347:-|nuORF	79.71258880314673	0.07236858429579222	1				NaN	NaN	0	NaN	4396	3890	8287
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8289	27.037	NaN	1151.7	30	0	123.78	0.106			+	-1	VIIFIMLQ	8	52	496.7982769803976	NaN	0	496.7987365722656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_VIIFIM(Oxidation (M))LQ_	REV__ENST00000272748.8_1_2:176860318-176867035:-|nuORF	29.841539824830324	1.7418937515398478	1				NaN	NaN	0	NaN	4397	3890	8287
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8290	27.038	NaN	4036	30	0	944.73	0.106	+			1942	AISSTVLGK	9	56	438.263531574012	874.512510214824	2	438.263916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AISSTVLGK_	ENSG00000105976|ENST00000397752|MET;nc|ENSG00000105976|P08581-2|MET	79.71258880314673	0.09879134589249085	1				NaN	NaN	0	NaN	4398	3890	8287
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8291	27.04	NaN	1073.7	30	0	154.27	0.106				-1	DMHCNLQG	8	47	487.6965621281904	NaN	0	487.6970520019531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_DMHC(Carbamidomethyl (C))NLQG_	ENST00000276201.6_2_X:118968520-118968646:-|nuORF	31.954861631926434	1.7418937515398478	1				NaN	NaN	0	NaN	4399	3890	8287
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8292	27.042	NaN	1103	30	0	232.83	0.036	+			32141	QSNETALHY	9	47	531.747384729301	NaN	0	531.74658203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QSNETALHY_	ENSG00000071537|ENST00000336735|SEL1L;ENST00000555923.1_1_14:81955544-81956809:-|nuORF	34.172542307311794	0.30503706118289736	1				NaN	NaN	0	NaN	4400	3890	8287
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8299	27.06	NaN	1116.9	30	0	230.93	0.143	+			28662	NLQEIIEK	8	45	493.77947010917165	985.5443872851433	2	493.7791748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NLQEIIEK_	ENST00000562945.2_1_16:34428496-34428757:-|nuORF	47.657333605630114	0.6087971902037268	1				NaN	NaN	0	NaN	4404	3893	8298
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8308	27.084	NaN	1633.4	30	0	194.35	0.214	+			28780	NPENSELKY	9	54	547.2621100092629	1092.5096670853256	2	547.2628173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NPENSELKY_	ENSG00000141448|ENST00000269216|GATA6;nc|ENSG00000141448|Q92908-2|GATA6	80.45461616416974	0.09558281504443908	1				NaN	NaN	0	NaN	4410	3896	8307
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8309	27.087	NaN	4939.3	30	0	1137.7	0.106			+	3154	ASIENLAQRT	10	43	368.199736902881	1101.577381308843	3	368.2002868652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASIENLAQRT_	REV__ENSG00000103496|ENST00000313843|STX4;REV__ENST00000486660.1_1_16:31049833-31051053:+|nuORF;REV__ENST00000487411.5_1_16:31045754-31051121:+|nuORF;REV__ENST00000493902.5_1_16:31047079-31051121:+|nuORF;REV__nc|ENSG00000103496|Q12846-2|STX4	19.996771675451527	0.7148376616046445	1				NaN	NaN	0	NaN	4411	3896	8307
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8310	27.089	NaN	2525.9	30	0	280.71	0.106	+			20812	KIEVETRSL	9	58	537.8126969100593	NaN	0	537.8131103515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KIEVETRSL_	ENSG00000077254|ENST00000370794|USP33;nc|ENSG00000077254|Q8TEY7|USP33	51.19269402634007	0.19847346126499396	1				NaN	NaN	0	NaN	4412	3896	8307
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8311	27.091	NaN	1052	30	0	184.56	0.034	+			10504	EVTDPSHAP	9	46	476.7210311374848	NaN	0	476.72113037109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EVTDPSHAP_	ENSG00000174282|ENST00000380599|ZBTB4;ZBTB4|p.G686Afs*53|1|0.55|ENSG00000174282|chr17:7462925-7462925|C/-|frameshift_variant	37.15910966729921	0.2899585034171616	1				NaN	NaN	0	NaN	4413	3896	8307
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8322	27.115	NaN	2005.2	30	0	363.69	0.214	+			38515	SSCGLPLGK	9	45	459.7393755607517	917.4641981883034	2	459.73974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SSC(Carbamidomethyl (C))GLPLGK_	ENSG00000064042|ENST00000503057|LIMCH1;nc|ENSG00000064042|Q9UPQ0-10|LIMCH1;nc|ENSG00000064042|Q9UPQ0-2|LIMCH1;nc|ENSG00000064042|Q9UPQ0-3|LIMCH1;nc|ENSG00000064042|Q9UPQ0-4|LIMCH1;nc|ENSG00000064042|Q9UPQ0-5|LIMCH1;nc|ENSG00000064042|Q9UPQ0-6|LIMCH1;nc|ENSG00000064042|Q9UPQ0-8|LIMCH1;nc|ENSG00000064042|Q9UPQ0-9|LIMCH1;nc|ENSG00000064042|Q9UPQ0|LIMCH1	74.25504064058377	0.12238981753128622	1				NaN	NaN	0	NaN	4421	3899	8321
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8323	27.119	NaN	1784.3	30	0	160.38	0.106	+			4376	ATGTVSTVWK	10	58	525.2850219317818	1048.5554909303635	2	525.2860717773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATGTVSTVWK_	ENST00000371269.7_1_1:55315325-55315445:-|nuORF	37.50817390946774	0.5721060100277453	1				NaN	NaN	0	NaN	4422	3899	8321
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8324	27.12	NaN	1543.7	30	0	256.55	0.035			+	24600	LGQLIQQPV	9	53	498.29801453387245	994.5814761345449	2	498.29815673828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LGQLIQQPV_	REV__ABHD6|p.D234N|1|0.34|ENSG00000163686|chr3:58285103-58285103|G/A|missense_variant;REV__ENSG00000163686|ENST00000478253|ABHD6	30.503639358989545	0.5181749237905803	1				NaN	NaN	0	NaN	4423	3899	8321
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8336	27.146	NaN	3681.3	30	0	649.82	0.214	+			1827	AIIENMSTK	9	62	503.76565836185006	1005.5167637905001	2	503.7657470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AIIENMSTK_	ENSG00000116729|ENST00000262348|WLS;nc|ENSG00000116729|Q5T9L3-2|WLS;nc|ENSG00000116729|Q5T9L3-3|WLS	66.96192283764107	0.15557981141143568	1				NaN	NaN	0	NaN	4432	3902	8335
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8337	27.15	NaN	2356.4	30	0	324.2	0.033	+			1084	AELATRAL	8	48	422.74797722920493	843.4814015252099	2	422.7484436035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AELATRAL_	ENSG00000173801|ENST00000393931|JUP	62.107414245175825	0.4809183816468817	1				NaN	NaN	0	NaN	4433	3902	8335
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8344	27.168	NaN	2553.8	30	0	627.59	0.214	+			14538	GTDVGTVLK	9	55	445.253115894593	NaN	0	445.2532043457031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTDVGTVLK_	ENSG00000012171|ENST00000616701|SEMA3B;ENSG00000075213|ENST00000265362|SEMA3A;ENST00000419007.5_1_3:50311763-50312407:+|nuORF;ENST00000456210.5_1_3:50311877-50313205:+|nuORF;nc|ENSG00000012171|Q13214-2|SEMA3B;SEMA3B|p.R595Afs*16|1|0.43|ENSG00000012171|chr3:50275779-50275779|C/-|frameshift_variant	75.04331003522576	0.0883683072398826	1				NaN	NaN	0	NaN	4437	3905	8343
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8345	27.171	NaN	1434.6	30	0	407.52	0.106			+	-1	EINQMLPI	8	54	487.25511488610715	972.4956768390143	2	487.25506591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_EINQM(Oxidation (M))LPI_	REV__tr|U7SU58|U7SU58_FUSNUTyrrecombinasedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01110PE=4SV=1	35.61828744233558	0.6843154725607303	1				NaN	NaN	0	NaN	4438	3905	8343
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8346	27.173	NaN	5312.5	30	0	2131.2	0.106	+			15626	GVLDRMMKK	9	45	359.86839120588877	1076.5833442178664	3	360.202880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GVLDRMMKK_	ENSG00000163191|ENST00000271638|S100A11;ENST00000478109.1_1_1:152005140-152020324:-|nuORF	34.172542307311794	0.4838870758800184	1				NaN	NaN	0	NaN	4439	3905	8343
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8347	27.175	NaN	1459.6	30	0	343.62	0.038	+			50357	WVLLQDILLQ	10	47	620.8673706054688	NaN	0	620.8673706054688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_WVLLQDILLQ_	DMD|p.K560Q|1|0.09|ENSG00000198947|chrX:32573771-32573771|T/G|missense_variant	54.722347961057174	0.27574710963839943	1				NaN	NaN	0	NaN	4440	3905	8343
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8356	27.195	NaN	9339.6	30	0	4039.6	0.215	+			48691	VTTGSEGLLK	10	63	502.78467430919363	1003.5547956851873	2	502.7851257324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTTGSEGLLK_	ENSG00000134987|ENST00000513710|WDR36;ENST00000505303.5_1_5:110428043-110447004:+|nuORF;nc|ENSG00000134987|Q8NI36|WDR36	83.6470233535746	0.16744595502813267	1				NaN	NaN	0	NaN	4446	3908	8355
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8357	27.199	NaN	4381.7	30	0	632.75	0.106			+	21804	KRAEMAKML	9	67	539.2983009305508	1076.5820489279015	2	539.3002319335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KRAEMAKML_	REV__ENSG00000123636|ENST00000392783|BAZ2B;REV__nc|ENSG00000226266|Q9UIF8-2|BAZ2B;REV__nc|ENSG00000226266|Q9UIF8-3|BAZ2B;REV__nc|ENSG00000226266|Q9UIF8-4|BAZ2B;REV__nc|ENSG00000226266|Q9UIF8-5|BAZ2B	61.691277971877994	0.19951612995419254	1				NaN	NaN	0	NaN	4447	3908	8355
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8358	27.201	NaN	3771.7	30	0	617	0.106			+	24750	LHSPNVGALH	10	61	522.7826867695904	1043.5508206059808	2	522.7838134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LHSPNVGALH_	REV__ENST00000481757.5_1_2:241513848-241514670:+|nuORF	58.78195531508484	0.37691818691852547	1				NaN	NaN	0	NaN	4448	3908	8355
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8359	27.203	NaN	905.49	30	0	104.19	0.106			+	50789	YENLSDKL	8	40	491.2483896305864	980.4822263279729	2	491.2485046386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YENLSDKL_	REV__ENSG00000119912|ENST00000265986|IDE;REV__ENST00000463640.1_1_10:94238531-94239198:-|nuORF;REV__nc|ENSG00000119912|P14735-2|IDE	40.77816245573522	0.6514838689002179	1				NaN	NaN	0	NaN	4449	3908	8355
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8360	27.204	NaN	4502.6	30	0	834.05	0.106	+			16213	HEDKIRVVL	9	47	370.2205029644973	1107.639679493692	3	370.2205505371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HEDKIRVVL_	EHD1|p.E248Rfs*50|1|0.19|ENSG00000110047|chr11:64860098-64860098|G/-|frameshift_variant;ENSG00000024422|ENST00000263277|EHD2;ENSG00000110047|ENST00000320631|EHD1;nc|ENSG00000024422|Q9NZN4-2|EHD2	42.396135135203025	0.392153681582562	1				NaN	NaN	0	NaN	4450	3908	8355
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8361	27.206	NaN	1714.2	30	0	186.15	0.035				-1	TSSLTECVL	9	57	505.2474964191771	NaN	0	505.2478942871094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_TSSLTEC(Carbamidomethyl (C))VL_	ENSG00000134470|ENST00000379977|IL15RA;ENST00000379972.6_1_10:5995060-6019797:-|nuORF;ENST00000532948.5_1_10:5995060-6019797:-|nuORF;IL15RA|p.L122Sfs*48|1|0.04|ENSG00000134470|chr10:5963761-5963762|-/A|frameshift_variant;nc|ENSG00000134470|Q13261-10|IL15RA;nc|ENSG00000134470|Q13261-3|IL15RA;nc|ENSG00000134470|Q13261-4|IL15RA;nc|ENSG00000134470|Q13261-5|IL15RA	44.116797842482775	0.2472372736944149	1				NaN	NaN	0	NaN	4451	3908	8355
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8369	27.224	NaN	4578.9	30	0	2121.7	0.214	+			48683	VTTGGMVLK	9	52	453.26004402285866	904.5055351125174	2	453.2596130371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTTGGMVLK_	ENSG00000173369|ENST00000509305|C1QB;nc|ENSG00000173369|P02746|C1QB	56.72105179125745	0.24094814563026265	1				NaN	NaN	0	NaN	4456	3911	8368
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8370	27.228	NaN	1809.7	30	0	258.26	0.034	+			6613	AYQKVVAGV	9	48	467.7710316729275	933.527510412655	2	467.7709655761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AYQKVVAGV_	ENSG00000223609|ENST00000650601|HBD;ENSG00000244734|ENST00000335295|HBB	110.33723246496265	0.028653888678955353	1				NaN	NaN	0	NaN	4457	3911	8368
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8376	27.243	NaN	2950.8	30	0	350	0.142			+	32097	QSFTDLNK	8	60	476.7404946860448	951.4664364388897	2	476.7401428222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QSFTDLNK_	REV__ENST00000420283.2_1_6:116573500-116573923:-|nuORF	37.81151784470057	0.6698925118251505	1				NaN	NaN	0	NaN	4460	3914	8375
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8385	27.266	NaN	2397.1	30	0	268.17	0.144	+			23248	KYINTDAKF	9	63	550.2931236373797	1098.5716943415594	2	550.2938232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KYINTDAKF_	ENSG00000100991|ENST00000252015|TRPC4AP;nc|ENSG00000100991|Q8TEL6-3|TRPC4AP	98.58198989935565	0.04066992115528678	1				NaN	NaN	0	NaN	4466	3917	8384
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8393	27.288	NaN	2344.8	30	0	604.28	0.214			+	29866	PLGALQQGS	9	42	435.73751956484836	869.4604861964967	2	435.73785400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PLGALQQGS_	REV__ENSG00000188282|ENST00000697321|RUFY4;REV__RUFY4|p.E426Rfs*11|1|0.38|ENSG00000188282|chr2:218076453-218076453|T/-|frameshift_variant	58.78195531508484	0.22376836668196862	1				NaN	NaN	0	NaN	4471	3920	8392
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8394	27.292	NaN	1615.9	30	0	427.89	0.106			+	29791	PIQPIGNN	8	50	426.7323300973426	851.4501072614852	2	426.73211669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PIQPIGNN_	REV__ENSG00000047188|ENST00000161863|YTHDC2;REV__YTHDC2|p.N676Tfs*9|1|0.46|ENSG00000047188|chr5:113553824-113553824|A/-|frameshift_variant	44.53106598305862	0.628196326904373	1				NaN	NaN	0	NaN	4472	3920	8392
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8395	27.293	NaN	1519.2	30	0	213.17	0.035	+			15058	GTNVMVTVAK	10	54	510.28161689222793	1018.5486808512559	2	510.28192138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTNVMVTVAK_	ENSG00000101294|ENST00000398174|HM13;ENST00000460389.5_1_20:30136650-30157019:+|nuORF;ENST00000464173.5_1_20:30136866-30137929:+|nuORF;ENST00000472128.5_1_20:30136905-30155443:+|nuORF;ENST00000483310.5_1_20:30136863-30150236:+|nuORF;ENST00000492709.5_1_20:30132820-30157019:+|nuORF;nc|ENSG00000101294|Q8TCT9-4|HM13;nc|ENSG00000101294|Q8TCT9-5|HM13;nc|ENSG00000101294|Q8TCT9|HM13	49.46582953369473	0.46192220282894864	1				NaN	NaN	0	NaN	4473	3920	8392
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8404	27.315	NaN	4257.8	30	0	550.61	0.214	+			15662	GVMRVGLVAK	10	65	515.3155764722229	1028.6166000112457	2	515.3165283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVMRVGLVAK_	ENSG00000129351|ENST00000588657|ILF3;ENST00000587928.5_1_19:10781281-10792148:+|nuORF;nc|ENSG00000129351|Q12906-2|ILF3;nc|ENSG00000129351|Q12906-3|ILF3;nc|ENSG00000129351|Q12906-4|ILF3;nc|ENSG00000129351|Q12906-5|ILF3;nc|ENSG00000129351|Q12906-6|ILF3;nc|ENSG00000129351|Q12906|ILF3	71.87747018426188	0.26198133118427214	1				NaN	NaN	0	NaN	4479	3923	8403
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8405	27.319	NaN	3072.6	30	0	502.63	0.106	+			35995	SEHVKLEQL	9	59	541.7957410733401	1081.57692921348	2	541.7962036132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEHVKLEQL_	ARHGAP1|p.L237Cfs*135|2|0.38|ENSG00000175220|chr11:46680674-46680674|G/-|frameshift_variant;ARHGAP1|p.L237Rfs*135|1|0.37|ENSG00000175220|chr11:46680673-46680673|A/-|frameshift_variant;ENSG00000175220|ENST00000311956|ARHGAP1	77.31757898189308	0.1091473830098891	1				NaN	NaN	0	NaN	4480	3923	8403
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8406	27.321	NaN	2385	30	0	690.56	0.035	+			43805	TLMKISRSL	9	60	524.8111431576846	1047.607733382169	2	524.8119506835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TLMKISRSL_	ENST00000520481.1_1_8:28304597-28321161:-|nuORF	27.882242232435846	0.5426732730940306	1				NaN	NaN	0	NaN	4481	3923	8403
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8415	27.342	NaN	4735.6	30	0	633.44	0.214	+			38807	SSMVFTTSK	9	62	494.24465889326547	986.474764853331	2	494.2449645996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSMVFTTSK_	ENSG00000112818|ENST00000230588|MEP1A	74.1650062923329	0.12277912660386392	1				NaN	NaN	0	NaN	4487	3926	8414
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8416	27.346	NaN	1425.8	30	0	136.11	0.106			+	33352	RHIQLVHR	8	51	529.8191928119554	1057.6238326907107	2	529.8200073242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RHIQLVHR_	REV__ENSG00000108576|ENST00000650711|SLC6A4;REV__nc|ENSG00000108576|P31645-2|SLC6A4;REV__SLC6A4|p.I581Mfs*24|1|0.05|ENSG00000108576|chr17:30203246-30203247|CT/-|frameshift_variant	31.954861631926434	0.7126016770032289	1				NaN	NaN	0	NaN	4488	3926	8414
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8417	27.348	NaN	1608.5	30	0	139.05	0.036	+			41268	SVLKEYNLK	9	58	547.316222885608	1092.617892838016	2	547.31787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVLKEYNLK_	nc|ENSG00000104973|Q71SY5-4|MED25	43.650786325866115	0.37743712540499297	1				NaN	NaN	0	NaN	4489	3926	8414
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8423	27.364	NaN	2297.5	30	0	283.12	0.214	+			50695	YEEQHPEL	8	61	522.7357141991713	1043.4568754651425	2	522.7362060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YEEQHPEL_	ENSG00000008517|ENST00000525643|IL32;nc|ENSG00000008517|P24001-3|IL32;nc|ENSG00000008517|P24001-4|IL32;nc|ENSG00000008517|P24001-5|IL32;nc|ENSG00000008517|P24001-6|IL32;nc|ENSG00000008517|P24001|IL32	71.87747018426188	0.391254423828572	1				NaN	NaN	0	NaN	4492	3929	8422
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8424	27.367	NaN	2177	30	0	1159.7	0.033			+	2201	ALPSSAIRA	9	47	443.26094287928674	884.5073328253735	2	443.2613220214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ALPSSAIRA_	REV__ENSG00000102539|ENST00000218721|MLNR;REV__nc|ENSG00000102539|O43193-2|MLNR	42.396135135203025	0.392153681582562	1				NaN	NaN	0	NaN	4493	3929	8422
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8435	27.393	NaN	6720.9	30	0	3842	0.214	+			284	AAPAYSRAL	9	52	460.2531534262968	918.4917539193937	2	460.7548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAPAYSRAL_	ENSG00000106211|ENST00000248553|HSPB1	77.31757898189308	0.1091473830098891	1				NaN	NaN	0	NaN	4501	3932	8434
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8436	27.396	NaN	1481.6	30	0	279.25	0.035	+			22919	KVPNEDIY	8	51	489.2519223103298	NaN	0	489.25262451171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVPNEDIY_	tr|U7SU03|U7SU03_FUSNUDisulfideisomeraseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01050PE=4SV=1	23.04248740728303	1.7418937515398478	1				NaN	NaN	0	NaN	4502	3932	8434
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8446	27.42	NaN	1716	30	0	291.8	0.214	+			9766	ENLRFRSR	8	57	539.2983009305508	1076.5820489279015	2	539.7987670898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ENLRFRSR_	sp|F5HIG1|HEPA_HCMVMDNAhelicase/primasecomplex-associatedproteinOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL102PE=3SV=1;sp|P16827|HEPA_HCMVADNAhelicase/primasecomplex-associatedproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL102PE=2SV=2	41.42661286455405	0.6474601000989023	1				NaN	NaN	0	NaN	4509	3935	8445
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8447	27.423	NaN	1483.7	30	0	123.81	0.106	+			45694	VAAGSYQRF	9	56	499.7562154641575	997.497877995115	2	499.7554626464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VAAGSYQRF_	ENSG00000160783|ENST00000368277|PMF1;nc|ENSG00000160783|Q6P1K2-3|PMF1;nc|ENSG00000160783|Q6P1K2-4|PMF1;nc|ENSG00000160783|Q6P1K2-5|PMF1;nc|ENSG00000160783|Q6P1K2-6|PMF1	54.776311868738084	0.25715957988447635	1				NaN	NaN	0	NaN	4510	3935	8445
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8448	27.425	NaN	1401.6	30	0	100.63	0.106	+			46298	VEKEGIHVL	9	48	512.2949018046127	1022.5752506760253	2	512.29541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VEKEGIHVL_	chr1:31911841-31915895|139|19.5|0.0|20.89|-|0|None,PTP4A2|1;ENSG00000112245|ENST00000626021|PTP4A1;ENSG00000184007|ENST00000647444|PTP4A2;ENST00000484483.1_1_1:32381486-32384666:-|nuORF;nc|ENSG00000184007|Q12974-2|PTP4A2;nc|ENSG00000184007|Q12974-4|PTP4A2	98.58198989935565	0.04066992115528678	1				NaN	NaN	0	NaN	4511	3935	8445
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8449	27.427	NaN	1784.1	30	0	437.43	0.032	+			29405	PATAHPAL	8	47	389.21615472907627	776.4177565249526	2	389.2160949707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PATAHPAL_	ENST00000574902.5_1_16:3191344-3191665:+|nuORF	35.200714571348534	0.6875396545722289	1				NaN	NaN	0	NaN	4512	3935	8445
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8461	27.453	NaN	5857.5	30	0	970.69	0.214	+			39745	STITGVMDK	9	66	476.2441971180451	950.4738413028903	2	476.24395751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STITGVMDK_	ENSG00000147872|ENST00000276914|PLIN2;PLIN2|p.V348*|1|0.15|ENSG00000147872|chr9:19116520-19116520|C/-|frameshift_variant	83.6470233535746	0.08277643980271215	1				NaN	NaN	0	NaN	4521	3938	8460
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8462	27.456	NaN	2448.8	30	0	316.09	0.106			+	20952	KKDLSILLG	9	68	493.81604309659997	985.61753326	2	493.8158874511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KKDLSILLG_	REV__ENSG00000260314|ENST00000569591|MRC1	56.43379154798735	0.2433427591689151	1				NaN	NaN	0	NaN	4522	3938	8460
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8463	27.458	NaN	1591.6	30	0	229.34	0.106	+			5217	ATTTLGSAL	9	42	417.73198807829004	NaN	0	417.73199462890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATTTLGSAL_	ENSG00000065361|ENST00000267101|ERBB3;ERBB3|p.R1080Vfs*22|1|0.14|ENSG00000065361|chr12:56101093-56101093|C/-|frameshift_variant;nc|ENSG00000065361|P21860-4|ERBB3;nc|ENSG00000065361|P21860-5|ERBB3	47.91560031466742	0.22105767942158736	1				NaN	NaN	0	NaN	4523	3938	8460
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8464	27.46	NaN	3149.5	30	0	498.12	0.106	+			33384	RIADIFVKK	9	53	363.8975818576619	NaN	0	363.8976135253906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RIADIFVKK_	ENSG00000180263|ENST00000343958|FGD6;ENST00000451107.3_1_12:95475298-95611245:-|nuORF;nc|ENSG00000180263|Q6ZV73-2|FGD6	53.08895987439943	0.18540527177656715	1				NaN	NaN	0	NaN	4524	3938	8460
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8465	27.462	NaN	2128.1	30	0	546.69	0.106	+			10843	FASQQGMTA	9	46	470.7128885222292	NaN	0	470.7132263183594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FASQQGMTA_	ENSG00000130176|ENST00000252456|CNN1;nc|ENSG00000130176|P51911-2|CNN1	78.26377905018397	0.07733306720594871	1				NaN	NaN	0	NaN	4525	3938	8460
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8466	27.464	NaN	1399.3	30	0	272.08	0.036	+			45428	TVYEEMMAK	9	56	559.2490763868367	1116.4835998404733	2	559.2501220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_TVYEEMM(Oxidation (M))AK_	ENSG00000144659|ENST00000650617|SLC25A38;SLC25A38|p.G301V|1|0.09|ENSG00000144659|chr3:39396507-39396507|G/T|missense_variant	47.657333605630114	0.33044192980041115	1				NaN	NaN	0	NaN	4526	3938	8460
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8478	27.489	NaN	9094.4	30	0	1636.6	0.214	+			10652	EYQKVGQSF	9	65	543.2665171952045	1084.518481457209	2	543.2671508789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EYQKVGQSF_	ENSG00000178996|ENST00000381410|SNX18;nc|ENSG00000178996|Q96RF0-3|SNX18;nc|ENSG00000178996|Q96RF0|SNX18	158.07458414430337	0.004987072822166904	1				NaN	NaN	0	NaN	4535	3941	8477
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8479	27.493	NaN	2023.5	30	0	482.3	0.106	+			4149	ATESGMLYH	9	61	504.7261925346833	1007.4378321361667	2	504.7261047363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATESGMLYH_	ENSG00000108559|ENST00000573584|NUP88;ENST00000574867.5_1_17:5292093-5322970:-|nuORF	73.97473282117947	0.12360187025703594	1				NaN	NaN	0	NaN	4536	3941	8477
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8480	27.495	NaN	1499.2	30	0	135.67	0.035	+			41855	SVTDAVALRV	10	51	515.797423608724	1029.5802942842479	2	515.79833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVTDAVALRV_	ENSG00000172500|ENST00000357519|FIBP;ENST00000442885.2_1_11:65655295-65655958:-|nuORF;ENST00000528937.1_1_11:65654989-65655958:-|nuORF;ENST00000532679.5_1_11:65653270-65655931:-|nuORF;FIBP|p.K190Nfs*5|1|0.42|ENSG00000172500|chr11:65885606-65885606|T/-|frameshift_variant;FIBP|p.R38H|1|0.5|ENSG00000172500|chr11:65888105-65888105|C/T|missense_variant;nc|ENSG00000172500|O43427|FIBP	35.61828744233558	0.588957954432594	1				NaN	NaN	0	NaN	4537	3941	8477
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8491	27.518	NaN	4721.7	30	0	648.43	0.214	+			20235	KELTIGSKL	9	65	494.80552294560493	987.5964929580099	2	494.80523681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KELTIGSKL_	ENSG00000197956|ENST00000368719|S100A6	76.16968421966216	0.11411088698345859	1				NaN	NaN	0	NaN	4545	3944	8490
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8492	27.522	NaN	1077.1	30	0	134.92	0.106	+			1404	AEVTKVVV	8	37	422.7605895996094	NaN	0	422.7605895996094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEVTKVVV_	ENSG00000167325|ENST00000300738|RRM1	64.20726635412375	1.7418937515398478	1				NaN	NaN	0	NaN	4546	3944	8490
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8493	27.524	NaN	1922.2	30	0	526.83	0.106	+			29057	NTIDPSHPM	9	49	506.23149283737337	1010.4484327415468	2	506.23199462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NTIDPSHPM_	ENSG00000090861|ENST00000261772|AARS1;nc|ENSG00000090861|P49588-2|AARS1	66.42927471994793	0.16001998865088202	1				NaN	NaN	0	NaN	4547	3944	8490
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8494	27.526	NaN	1157.5	30	0	282.39	0.106	+			46878	VILYFEPS	8	45	484.25867026529363	NaN	0	484.25799560546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VILYFEPS_	ENSG00000151025|ENST00000376351|GPR158;ENSG00000164961|ENST00000318410|WASHC5;GPR158|p.A1124Lfs*2|1|0.07|ENSG00000151025|chr10:25598987-25598987|C/-|frameshift_variant;GPR158|p.K1143Rfs*23|1|0.32|ENSG00000151025|chr10:25599048-25599048|A/-|frameshift_variant	33.51558372728122	1.7418937515398478	1				NaN	NaN	0	NaN	4548	3944	8490
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8495	27.527	NaN	2105.5	30	0	618.99	0.037	+			4478	ATITDKELLK	10	32	377.8919896748671	NaN	0	377.8920593261719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATITDKELLK_	ENSG00000131503|ENST00000360839|ANKHD1;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	31.634271133179894	0.39630454568332174	1				NaN	NaN	0	NaN	4549	3944	8490
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8508	27.555	NaN	4875	30	0	1449.2	0.214	+			48920	VVDQTTLMK	9	59	517.7814233691649	1033.5482938051298	2	517.7822875976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVDQTTLMK_	ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;TRRAP-ASNS|1|fusion;TRRAP-ASNS|2|fusion;TRRAP|p.A1620Cfs*35|1|0.27|ENSG00000196367|chr7:98949499-98949500|-/G|frameshift_variant;TRRAP|p.I564Hfs*9|1|0.29|ENSG00000196367|chr7:98910389-98910390|-/G|frameshift_variant;TRRAP|p.K3443Sfs*19|1|0.28|ENSG00000196367|chr7:99004246-99004246|A/-|frameshift_variant;TRRAP|p.L291*|1|0.36|ENSG00000196367|chr7:98900691-98900691|T/-|frameshift_variant;TRRAP|p.P1292Lfs*17|1|0.44|ENSG00000196367|chr7:98933258-98933258|C/-|frameshift_variant;TRRAP|p.P1360Afs*14|1|0.05|ENSG00000196367|chr7:98935641-98935642|-/GCAAATAA|frameshift_variant	96.0336014099291	0.047854655524928534	1				NaN	NaN	0	NaN	4559	3947	8507
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8509	27.558	NaN	1026.9	30	0	148.15	0.106				-1	 	0	53	525.303917286896	1048.5932816405918	2	525.304443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	4560	3947	8507
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8510	27.56	NaN	1954.6	30	0	232.94	0.035	+			39024	SSSHHGHVLG	10	51	509.24757440721237	1016.4805958812248	2	509.2475280761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSSHHGHVLG_	ENST00000555357.1_1_12:56361683-56362031:+|nuORF	38.80614096846853	0.5601458937078225	1				NaN	NaN	0	NaN	4561	3947	8507
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8516	27.576	NaN	1363.8	30	0	211.49	0.142			+	38057	SPRRRAPP	8	53	468.7792804437165	935.544007954233	2	468.7796325683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SPRRRAPP_	REV__ENST00000361961.7_1_12:39764061-39837002:-|nuORF	35.200714571348534	0.6875396545722289	1				NaN	NaN	0	NaN	4564	3950	8515
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8527	27.604	NaN	2106.7	30	0	458.63	0.214	+			48600	VTQTTARR	8	54	466.7654975516287	NaN	0	466.76605224609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTQTTARR_	ENST00000595068.5_1_19:35761993-35769966:+|nuORF;ENST00000599471.5_1_19:35761650-35769699:+|nuORF	37.81151784470057	1.7418937515398478	1				NaN	NaN	0	NaN	4572	3953	8526
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8528	27.607	NaN	1314.5	30	0	267.4	0.106	+			25398	LPKETEHS	8	53	470.7403125356082	939.4660721380164	2	470.7409973144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LPKETEHS_	CEP295|p.L2479Ffs*6|1|0.29|ENSG00000166004|chr11:93729651-93729651|A/-|frameshift_variant;ENSG00000166004|ENST00000325212|CEP295;nc|ENSG00000166004|Q9C0D2-3|CEP295	55.50420428727701	0.5462892107279674	1				NaN	NaN	0	NaN	4573	3953	8526
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8529	27.609	NaN	1306.2	30	0	219.8	0.035	+			37581	SLNPISARAV	10	52	514.2995978511747	NaN	0	514.2996215820312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLNPISARAV_	ENST00000274000.9_2_4:113153062-113153314:+|nuORF	28.081489160057373	0.40797012399963245	1				NaN	NaN	0	NaN	4574	3953	8526
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8540	27.633	NaN	1835.7	30	0	127.19	0.214	+			2427	APFEQAGQKY	10	59	569.7808060022899	1137.5470590713796	2	569.78125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_APFEQAGQKY_	ENSG00000177106|ENST00000318562|EPS8L2;ENST00000526909.5_1_11:710402-726978:+|nuORF;ENST00000527832.5_1_11:724661-726978:+|nuORF;ENST00000531393.5_1_11:721935-726978:+|nuORF;EPS8L2|p.V669Gfs*33|1|0.13|ENSG00000177106|chr11:726690-726690|T/-|frameshift_variant;nc|ENSG00000177106|Q9H6S3-2|EPS8L2;nc|ENSG00000177106|Q9H6S3-3|EPS8L2	47.95952297671804	0.47580206326914537	1				NaN	NaN	0	NaN	4582	3956	8539
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8541	27.636	NaN	1673.3	30	0	188.23	0.035	+			27599	MPNGDHIVSA	10	64	520.7448130187447	1039.4750731042893	2	520.7459716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MPNGDHIVSA_	ENSG00000007168|ENST00000397195|PAFAH1B1;ENST00000572915.6_1_17:2573570-2586914:+|nuORF;nc|ENSG00000007168|P43034-2|PAFAH1B1	23.52269567125451	0.6877354443478558	1				NaN	NaN	0	NaN	4583	3956	8539
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8554	27.664	NaN	5129.6	30	0	739.42	0.214	+			19902	KEFDGKSLV	9	63	511.77935086397287	1021.5441487947458	2	511.7800598144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEFDGKSLV_	ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;ENST00000517330.1_1_5:77337712-77337985:-|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P;nc|ENSG00000205940|Q58FF8|HSP90AB2P	85.86182877749512	0.07653218437724067	1				NaN	NaN	0	NaN	4593	3959	8553
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8555	27.667	NaN	3578.3	30	0	1060	0.106	+			45892	VAPNTSTNL	9	45	458.740535027241	915.466517121282	2	458.7405090332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VAPNTSTNL_	ENSG00000163349|ENST00000426820|HIPK1;nc|ENSG00000163349|Q86Z02-2|HIPK1;nc|ENSG00000163349|Q86Z02-3|HIPK1;nc|ENSG00000163349|Q86Z02-4|HIPK1	59.93077597824379	0.21419174904018318	1				NaN	NaN	0	NaN	4594	3959	8553
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8556	27.669	NaN	2010	30	0	438.47	0.106				-1	KMYEMLVT	8	50	515.7513439108166	1029.488134888433	2	515.7520141601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_KMYEM(Oxidation (M))LVT_	ENSG00000164142|ENST00000435205|FHIP1A	38.80614096846853	0.6637206697844082	1				NaN	NaN	0	NaN	4595	3959	8553
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8557	27.671	NaN	2163.9	30	0	852.36	0.106	+			10553	EYATKISRF	9	50	557.7982181047413	1113.5818832762825	2	557.7986450195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EYATKISRF_	ENSG00000057757|ENST00000246151|PITHD1;nc|ENSG00000057757|Q9GZP4-2|PITHD1	58.22992032128504	0.22837015374068087	1				NaN	NaN	0	NaN	4596	3959	8553
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8558	27.673	NaN	3035.9	30	0	1331.2	0.106				-1	MSRRLLALM	9	34	369.54498291015625	NaN	0	369.54498291015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_M(Oxidation (M))SRRLLALM_	ENST00000339365.2_1_10:75528610-75528643:+|nuORF	25.57405402267927	0.3484490411150625	1				NaN	NaN	0	NaN	4597	3959	8553
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8559	27.675	NaN	2065.8	30	0	223.27	0.036				-1	IVCVKAVVMT	10	63	539.8021349927601	1077.58971705232	2	539.80419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_IVCVKAVVM(Oxidation (M))T_	SPRED2|p.R15C|1|0.25|ENSG00000198369|chr2:65344880-65344880|G/A|missense_variant	40.77816245573522	0.5419747034533848	1				NaN	NaN	0	NaN	4598	3959	8553
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8560	27.675	NaN	1005.3	30	0	52.254	0.141	+			6639	AYVEKVERL	9	54	553.8145751953125	NaN	0	553.8145751953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AYVEKVERL_	ENSG00000114019|ENST00000249883|AMOTL2;ENST00000506326.1_1_3:134076549-134085275:-|nuORF;nc|ENSG00000114019|Q9Y2J4-3|AMOTL2;nc|ENSG00000114019|Q9Y2J4-4|AMOTL2;nc|ENSG00000114019|Q9Y2J4|AMOTL2	33.921630207806714	0.3063038642147651	1				NaN	NaN	0	NaN	4599	3959	8553
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8572	27.703	NaN	4287.5	30	0	3072.3	0.214				-1	 	0	30	343.19882101525263	684.3830890973053	2	343.198974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	4608	3962	8571
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8573	27.706	NaN	20997	30	0	4161.9	0.106	+			48193	VTAKELSLVNK	11	82	401.242937648776	1200.706983546528	3	401.5777587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTAKELSLVNK_	ENSG00000050405|ENST00000341247|LIMA1;LIMA1|p.T536Lfs*38|2|0.4|ENSG00000050405|chr12:50177739-50177739|G/-|frameshift_variant;nc|ENSG00000050405|Q9UHB6-4|LIMA1	131.4175700721456	0.0011899986011700767	1				NaN	NaN	0	NaN	4609	3962	8571
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8574	27.708	NaN	1514.1	30	0	141.83	0.106			+	35698	SDKLRFPG	8	50	460.2531534262968	918.4917539193937	2	461.2560119628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SDKLRFPG_	REV__ENST00000557829.1_1_14:24545691-24546719:+|nuORF	25.450171626174864	0.7628259754767981	1				NaN	NaN	0	NaN	4610	3962	8571
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8575	27.71	NaN	2153.6	30	0	280.9	0.106	+			34493	RVFSWSQAK	9	72	554.798232832676	1107.581912732152	2	554.7992553710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RVFSWSQAK_	ENST00000286692.8_1_1:111682258-111682414:-|nuORF	72.2432373244024	0.13108886737667413	1				NaN	NaN	0	NaN	4611	3962	8571
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8576	27.712	NaN	1150.1	30	0	122.87	0.106				-1	TAGAVTQCY	9	50	485.7185092574152	969.4224655816304	2	485.71868896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_TAGAVTQC(Carbamidomethyl (C))Y_	ENSG00000105640|ENST00000222247|RPL18A	37.81151784470057	0.4459294069877048	1				NaN	NaN	0	NaN	4612	3962	8571
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8577	27.714	NaN	2602.1	30	0	436.19	0.035	+			43154	TESTARVEL	9	56	503.2638572115776	1004.5131614899552	2	503.2650451660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TESTARVEL_	ENSG00000196235|ENST00000432763|SUPT5H;ENST00000599335.5_1_19:39959399-39965382:+|nuORF;nc|ENSG00000196235|O00267-2|SUPT5H;SUPT5H|p.P800Hfs*154|1|0.21|ENSG00000196235|chr19:39473425-39473425|C/-|frameshift_variant	85.16082228582465	0.07850854922700509	1				NaN	NaN	0	NaN	4613	3962	8571
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8586	27.735	NaN	2843.8	30	0	496.32	0.214	+			38086	SPTNTVHMY	9	70	525.2393844891209	1048.4642160450417	2	525.239990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SPTNTVHMY_	ENSG00000138592|ENST00000307179|USP8;nc|ENSG00000138592|P40818-2|USP8;USP8|p.K997Rfs*2|1|0.11|ENSG00000138592|chr15:50497178-50497178|A/-|frameshift_variant	104.0567914643314	0.03506238181059741	1				NaN	NaN	0	NaN	4619	3965	8585
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8587	27.739	NaN	2221.7	30	0	196.56	0.106	+			35247	SALHIAIEK	9	64	491.29004218871586	980.5655314442317	2	491.2900695800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SALHIAIEK_	ENSG00000187688|ENST00000338560|TRPV2;TRPV2|p.I444Sfs*23|3|0.39|ENSG00000187688|chr17:16427521-16427521|G/-|frameshift_variant	51.52775601994872	0.28504342437107444	1				NaN	NaN	0	NaN	4620	3965	8585
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8588	27.741	NaN	5637	30	0	2976.8	0.106			+	43812	TLPLRLLLH	9	50	359.2375420347039	1074.6907967043117	3	359.2376708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TLPLRLLLH_	REV__ENSG00000198885|ENST00000439118|ITPRIPL1;REV__nc|ENSG00000198885|Q6GPH6-2|ITPRIPL1;REV__nc|ENSG00000198885|Q6GPH6-3|ITPRIPL1	19.996771675451527	0.6112419832031292	1				NaN	NaN	0	NaN	4621	3965	8585
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8589	27.743	NaN	1801.2	30	0	184.95	0.106	+			4758	ATNAACASLLK	11	66	560.2948712655442	1118.5751895978883	2	560.2949829101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_ATNAAC(Carbamidomethyl (C))ASLLK_	ENSG00000134996|ENST00000346234|OSTF1;OSTF1|p.K191Rfs*11|1|0.32|ENSG00000134996|chr9:75140914-75140914|A/-|frameshift_variant	86.18897241530135	0.11437590510873513	1				NaN	NaN	0	NaN	4622	3965	8585
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8590	27.744	NaN	1090.1	30	0	100.98	0.106	+			30629	QASQLSNSY	9	46	499.2327013150893	NaN	0	499.2323303222656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QASQLSNSY_	ENSG00000137501|ENST00000359152|SYTL2;SYTL2|p.Q663Tfs*35|1|0.14|ENSG00000137501|chr11:85709344-85709345|-/T|frameshift_variant	28.081489160057373	0.33578952234132536	1				NaN	NaN	0	NaN	4623	3965	8585
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8591	27.746	NaN	2419.6	30	0	386.71	0.034			+	39017	SSSGTRSILG	10	60	482.7579184773164	963.5012840214329	2	482.7577209472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSSGTRSILG_	REV__ENSG00000055483|ENST00000449938|USP36;REV__USP36|p.K688Nfs*35|1|0.21|ENSG00000055483|chr17:78806980-78806980|T/-|frameshift_variant	37.81151784470057	0.569310847604193	1				NaN	NaN	0	NaN	4624	3965	8585
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8592	27.747	NaN	1656.8	30	0	345.82	0.141			+	40543	SVAALSEPEGN	11	58	537.2603149414062	NaN	0	537.2603149414062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVAALSEPEGN_	REV__ADAMTS8|p.A207Pfs*38|1|0.31|ENSG00000134917|chr11:130427668-130427668|C/-|frameshift_variant;REV__ENSG00000134917|ENST00000257359|ADAMTS8	42.86426827375447	0.36657022113551535	1				NaN	NaN	0	NaN	4625	3965	8585
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8602	27.772	NaN	4352.7	30	0	1016.3	0.214	+			28984	NSLIQTGLA	9	55	458.7583261333717	915.5020993335435	2	458.7583312988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NSLIQTGLA_	ENSG00000174339|ENST00000307832|OR2Y1;OR2Y1|p.Y277Ifs*3|2|0.4|ENSG00000174339|chr5:180739230-180739230|A/-|frameshift_variant	35.61828744233558	0.47037581924408073	1				NaN	NaN	0	NaN	4632	3968	8601
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8603	27.775	NaN	1235.5	30	0	84.758	0.106	+			24091	LEKGSLSAM	9	53	468.2466632780214	NaN	0	468.2471618652344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LEKGSLSAM_	ENSG00000197448|ENST00000358406|GSTK1;nc|ENSG00000197448|Q9Y2Q3-2|GSTK1;nc|ENSG00000197448|Q9Y2Q3-3|GSTK1	60.11826168202944	0.14881452885248947	1				NaN	NaN	0	NaN	4633	3968	8601
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8604	27.777	NaN	1410	30	0	221.39	0.032	+			43409	TGKAPAAIV	9	39	414.2523884697135	826.490224006227	2	414.2513732910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TGKAPAAIV_	tr|U7SWV5|U7SWV5_FUSNUBD-FAE-likedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01186PE=4SV=1	29.14955571784316	0.5308295550522326	1				NaN	NaN	0	NaN	4634	3968	8601
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8615	27.802	NaN	1909.9	30	0	321.2	0.214	+			39828	STLKKISIP	9	54	493.81604309659997	985.61753326	2	493.8162841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STLKKISIP_	CCT3|p.A379Lfs*9|1|0.21|ENSG00000163468|chr1:156312061-156312061|C/-|frameshift_variant;CCT3|p.K197Nfs*23|1|0.17|ENSG00000163468|chr1:156320857-156320857|T/-|frameshift_variant;CCT3|p.L350Ffs*9|1|0.49|ENSG00000163468|chr1:156312146-156312147|-/A|frameshift_variant;ENSG00000163468|ENST00000295688|CCT3;nc|ENSG00000163468|P49368-2|CCT3	58.22992032128504	0.22837015374068087	1				NaN	NaN	0	NaN	4642	3971	8614
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8616	27.806	NaN	7181.7	30	0	1559.2	0.106	+			39463	STFDTQITK	9	66	520.7662557939236	1039.5179586546471	2	520.7677001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STFDTQITK_	ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC;PRKDC|p.D2437Wfs*3|1|0.11|ENSG00000253729|chr8:47840161-47840162|-/CA|frameshift_variant;PRKDC|p.K3681Nfs*6|1|0.32|ENSG00000253729|chr8:47785174-47785177|TTCT/-|frameshift_variant;PRKDC|p.M3670*|1|0.5|ENSG00000253729|chr8:47785212-47785212|T/-|frameshift_variant;PRKDC|p.M3846Cfs*12|1|0.13|ENSG00000253729|chr8:47779047-47779047|T/-|frameshift_variant;PRKDC|p.M4020Cfs*2|1|0.31|ENSG00000253729|chr8:47776968-47776968|T/-|frameshift_variant;PRKDC|p.N3605Kfs*3|1|0.22|ENSG00000253729|chr8:47788993-47788994|-/T|frameshift_variant;PRKDC|p.N4037Ifs*15|1|0.17|ENSG00000253729|chr8:47776916-47776916|T/-|frameshift_variant;PRKDC|p.R2704Gfs*13|2|0.34|ENSG00000253729|chr8:47834238-47834238|T/-|frameshift_variant;PRKDC|p.S3402Ifs*16|1|0.04|ENSG00000253729|chr8:47799302-47799303|-/AAACCGTGAGTTAGAGGAGGTAA|frameshift_variant;PRKDC|p.S4099Qfs*6|1|0.25|ENSG00000253729|chr8:47774265-47774265|A/-|frameshift_variant;PRKDC|p.T3268Pfs*7|1|0.5|ENSG00000253729|chr8:47803426-47803426|T/-|frameshift_variant;PRKDC|p.W3401Cfs*4|1|0.01|ENSG00000253729|chr8:47799304-47799305|-/AATGAATA|frameshift_variant	123.20810148215591	0.019257656778428764	1				NaN	NaN	0	NaN	4643	3971	8614
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8617	27.808	NaN	1908.1	30	0	244.64	0.106	+			41795	SVSQPIMVQR	10	52	572.8101452729067	1143.6057376126132	2	572.8111572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVSQPIMVQR_	ENSG00000134644|ENST00000426105|PUM1;nc|ENSG00000134644|Q14671-2|PUM1;nc|ENSG00000134644|Q14671|PUM1	73.90049950687481	0.24545335595283982	1				NaN	NaN	0	NaN	4644	3971	8614
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8618	27.81	NaN	1820.9	30	0	219.41	0.106	+			7270	DANPETHAF	9	49	501.2196535974615	NaN	0	501.2205505371094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DANPETHAF_	ENSG00000100412|ENST00000216254|ACO2	64.20726635412375	0.13137488984569443	1				NaN	NaN	0	NaN	4645	3971	8614
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8619	27.812	NaN	3360.3	30	0	1255.2	0.036	+			33024	REIQTAVRL	9	62	543.3242585060574	1084.6339640789147	2	543.3255004882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_REIQTAVRL_	ENSG00000124635|ENST00000339812|H2BC11;ENSG00000146047|ENST00000274764|H2BC1;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;nc|ENSG00000203814|Q5QNW6-2|H2BC18	63.42647028704847	0.1850514934184437	1				NaN	NaN	0	NaN	4646	3971	8614
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8630	27.837	NaN	31760	30	0	9650.9	0.214	+			4443	ATILAGDVKVK	11	66	372.2322552968112	1113.6749364906336	3	372.2323303222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATILAGDVKVK_	ENSG00000119669|ENST00000238647|IRF2BPL;ENSG00000168264|ENST00000366609|IRF2BP2;nc|ENSG00000168264|Q7Z5L9-2|IRF2BP2;nc|ENSG00000168264|Q7Z5L9-3|IRF2BP2	105.16503226865211	0.050009141116738	1				NaN	NaN	0	NaN	4654	3974	8629
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8631	27.84	NaN	3946.1	30	0	535.66	0.106	+			16495	HETSNINDF	9	62	538.7355919703796	1075.456631007559	2	538.7359619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HETSNINDF_	ENSG00000135821|ENST00000331872|GLUL;ENST00000603996.1_1_5:151230113-151230284:+|nuORF	68.84614121027924	0.14577793175421136	1				NaN	NaN	0	NaN	4655	3974	8629
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8632	27.842	NaN	1351.6	30	0	279.44	0.034			+	29841	PLAPEEGSAV	10	52	485.24755859375	NaN	0	485.24755859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PLAPEEGSAV_	REV__ENSG00000130287|ENST00000252575|NCAN;REV__ENST00000590187.2_1_19:19337677-19349276:+|nuORF	37.15910966729921	0.3781637092648983	1				NaN	NaN	0	NaN	4656	3974	8629
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8641	27.864	NaN	2326	30	0	389.5	0.214	+			18111	ILAGDVKVK	9	57	471.80294903955854	941.5913451459171	2	471.8028564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ILAGDVKVK_	ENSG00000119669|ENST00000238647|IRF2BPL;ENSG00000168264|ENST00000366609|IRF2BP2;nc|ENSG00000168264|Q7Z5L9-2|IRF2BP2;nc|ENSG00000168264|Q7Z5L9-3|IRF2BP2	65.46538089061403	0.16805504838372562	1				NaN	NaN	0	NaN	4662	3977	8640
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8642	27.868	NaN	1841.5	30	0	318	0.106	+			29058	NTIDPSHPM	9	61	506.23149283737337	1010.4484327415468	2	506.23187255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NTIDPSHPM_	ENSG00000090861|ENST00000261772|AARS1;nc|ENSG00000090861|P49588-2|AARS1	71.87747018426188	0.13267044672804276	1				NaN	NaN	0	NaN	4663	3977	8640
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8643	27.869	NaN	1988	30	0	228.96	0.106	+			727	AEAVSRVL	8	44	422.74765028686807	NaN	0	422.7475891113281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEAVSRVL_	ENSG00000177556|ENST00000313115|ATOX1	71.87747018426188	1.7418937515398478	1				NaN	NaN	0	NaN	4664	3977	8640
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8644	27.871	NaN	1154.1	30	0	235.37	0.106			+	21366	KMEKTGISL	9	58	503.7835429180542	NaN	0	503.78350830078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KMEKTGISL_	REV__ENST00000304004.7_1_6:43487543-43487827:+|nuORF	54.776311868738084	0.17377682019723872	1				NaN	NaN	0	NaN	4665	3977	8640
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8645	27.873	NaN	2177.4	30	0	397.43	0.106	+			6412	AVVQTLVAK	9	50	464.794507435485	927.57446193777	2	464.79473876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVVQTLVAK_	ENSG00000165671|ENST00000439151|NSD1;nc|ENSG00000165671|Q96L73-2|NSD1;nc|ENSG00000165671|Q96L73-3|NSD1	75.04331003522576	0.118981335847003	1				NaN	NaN	0	NaN	4666	3977	8640
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8646	27.875	NaN	1064.9	30	0	86.17	0.036			+	42754	TDQLRLLAK	9	50	529.3218878836881	1056.629222834176	2	529.3226928710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TDQLRLLAK_	REV__ENSG00000122884|ENST00000394890|P4HA1;REV__nc|ENSG00000122884|P13674-2|P4HA1;REV__nc|ENSG00000122884|P13674-3|P4HA1	39.252832667884924	0.4290233611298554	1				NaN	NaN	0	NaN	4667	3977	8640
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8647	27.875	NaN	1418.5	30	0	141.6	0.14			+	-1	DESCLKGGY	9	55	514.7212524414062	NaN	0	514.7212524414062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_DESC(Carbamidomethyl (C))LKGGY_	REV__ENSG00000021645|ENST00000335750|NRXN3;REV__nc|ENSG00000021645|Q9Y4C0|NRXN3;REV__NRXN3|p.R369Vfs*8|1|0.3|ENSG00000021645|chr14:78803793-78803793|G/-|frameshift_variant	47.91560031466742	0.22105767942158736	1				NaN	NaN	0	NaN	4668	3977	8640
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8656	27.899	NaN	2870.1	30	0	482.17	0.214	+			3229	ASLATTLTK	9	60	453.2686159820315	904.5226790308631	2	453.2685241699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASLATTLTK_	ENSG00000129083|ENST00000439561|COPB1;ENST00000526191.1_1_11:14496007-14497407:-|nuORF	80.45461616416974	0.09558281504443908	1				NaN	NaN	0	NaN	4674	3980	8655
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8657	27.902	NaN	1877.8	30	0	427.31	0.035			+	23957	LDSPVPFDQ	9	58	509.24757440721237	1016.4805958812248	2	509.7492370605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LDSPVPFDQ_	REV__SLC16A7|p.S318Nfs*85|1|0.04|ENSG00000118596|chr12:59775247-59775248|-/ATTCCTTG|frameshift_variant	64.20726635412375	0.17854274437659667	1				NaN	NaN	0	NaN	4675	3980	8655
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8665	27.922	NaN	4588.7	30	0	433.58	0.214			+	49481	VVYSREPY	8	63	506.75818149503027	1011.5018100568606	2	506.757080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVYSREPY_	REV__ENSG00000196455|ENST00000356763|PIK3R4;REV__ENST00000512362.5_1_3:130399450-130405229:-|nuORF;REV__ENST00000512677.1_1_3:130399450-130405071:-|nuORF	79.9392285194092	0.32408006123154964	1				NaN	NaN	0	NaN	4680	3983	8664
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8666	27.926	NaN	3832.1	30	0	702.86	0.106	+			19287	KAFSVQLD	8	60	454.24763353338517	906.4807141335704	2	454.24749755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KAFSVQLD_	ENSG00000105643|ENST00000222250|ARRDC2;ENST00000593460.1_1_19:18119032-18119587:+|nuORF;ENST00000596105.2_1_19:18119032-18119587:+|nuORF	54.776311868738084	0.5534952410049249	1				NaN	NaN	0	NaN	4681	3983	8664
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8667	27.928	NaN	1413.6	30	0	132.66	0.106			+	44663	TTGLFCAARLG	11	57	555.2919776781907	1108.5694024231814	2	555.292724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TTGLFCAARLG_	REV__ENST00000380262.7_1_17:7835519-7835729:+|nuORF	37.81151784470057	0.5878881669006212	1				NaN	NaN	0	NaN	4682	3983	8664
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8668	27.93	NaN	1698.9	30	0	193.69	0.034			+	50555	YATQVVGIN	9	56	482.7579184773164	963.5012840214329	2	483.25701904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YATQVVGIN_	REV__ENSG00000013375|ENST00000513973|PGM3;REV__nc|ENSG00000013375|O95394-3|PGM3;REV__nc|ENSG00000013375|O95394-4|PGM3	45.9519527083369	0.35044536499095585	1				NaN	NaN	0	NaN	4683	3983	8664
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8674	27.946	NaN	6470.5	30	0	733.21	0.214	+			2683	AQNSVIIVDK	10	78	543.8110119218759	1085.6074709105517	2	543.8126220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AQNSVIIVDK_	ENSG00000072274|ENST00000360110|TFRC	120.63048641472336	0.026439265609364573	1				NaN	NaN	0	NaN	4686	3986	8673
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8675	27.949	NaN	2573.6	30	0	353.19	0.106	+			40534	SVAALPVCK	9	57	472.765131294261	943.515709655322	2	472.76611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SVAALPVC(Carbamidomethyl (C))K_	ENSG00000007255|ENST00000585934|TRAPPC6A;nc|ENSG00000007255|O75865-2|TRAPPC6A	68.78682469695295	0.14603441672067394	1				NaN	NaN	0	NaN	4687	3986	8673
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8676	27.951	NaN	832.6	30	0	105.19	0.038			+	20225	KELPAYNLLK	10	44	594.8505094546895	1187.6864659761789	2	595.3536987304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KELPAYNLLK_	REV__ENSG00000177700|ENST00000322028|POLR2L	36.446750945000026	0.5818864909973037	1				NaN	NaN	0	NaN	4688	3986	8673
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8687	27.977	NaN	11607	30	0	1531.2	0.214				-1	 	0	70	444.2505105298516	886.4864681265033	2	444.25054931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	4696	3989	8686
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8688	27.98	NaN	1241.3	30	0	296.81	0.106	+			22646	KTVYNPAAL	9	42	488.7765582478429	975.5385635624858	2	488.7767028808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTVYNPAAL_	ENSG00000139746|ENST00000438737|RBM26;nc|ENSG00000139746|Q5T8P6-2|RBM26;nc|ENSG00000139746|Q5T8P6-3|RBM26;nc|ENSG00000139746|Q5T8P6-4|RBM26;nc|ENSG00000139746|Q5T8P6-5|RBM26;RBM26|p.N783Ifs*5|1|0.11|ENSG00000139746|chr13:79342743-79342743|T/-|frameshift_variant	26.69291269510374	0.5537881896960711	1				NaN	NaN	0	NaN	4697	3989	8686
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8689	27.982	NaN	2362.7	30	0	739.09	0.106				-1	LLCHRSVMF	9	39	393.5325027802015	1177.5756789408047	3	393.532958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_LLC(Carbamidomethyl (C))HRSVM(Oxidation (M))F_	ENST00000525183.1_1_11:75848287-75852454:+|nuORF	25.57405402267927	0.5642445186134241	1				NaN	NaN	0	NaN	4698	3989	8686
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8690	27.984	NaN	1627.2	30	0	270.16	0.035	+			10324	ETSKRELE	8	51	496.2558958212625	990.4972387093251	2	496.2562561035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ETSKRELE_	ANKRD26|p.K1234Nfs*19|2|0.18|ENSG00000107890|chr10:27033330-27033330|T/-|frameshift_variant;ANKRD26|p.K1452Rfs*7|1|0.29|ENSG00000107890|chr10:27017653-27017653|T/-|frameshift_variant;ANKRD26|p.N1518Ifs*14|1|0.04|ENSG00000107890|chr10:27014665-27014666|-/A|frameshift_variant;ANKRD26|p.N1518Lfs*11|1|0.04|ENSG00000107890|chr10:27014666-27014667|-/AGAATCATAGGAAATAA|frameshift_variant;ANKRD26|p.N1659Kfs*4|1|0.3|ENSG00000107890|chr10:27006939-27006940|-/T|frameshift_variant;ANKRD26|p.Y1555Ifs*2|1|0.28|ENSG00000107890|chr10:27014555-27014556|-/T|frameshift_variant;ENSG00000107890|ENST00000376087|ANKRD26;nc|ENSG00000107890|Q9UPS8-2|ANKRD26	47.657333605630114	0.6087971902037268	1				NaN	NaN	0	NaN	4699	3989	8686
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8701	28.008	NaN	9061.4	30	0	917.94	0.214	+			16165	HEAEVLKQL	9	73	533.7981344404832	1065.5817159477663	2	533.7987060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HEAEVLKQL_	ENSG00000117632|ENST00000455785|STMN1;ENST00000465604.1_1_1:26227509-26228203:-|nuORF;ENST00000485226.1_1_1:26227942-26230296:-|nuORF;nc|ENSG00000117632|P16949-2|STMN1	148.98678547993487	0.0071052929883181565	1				NaN	NaN	0	NaN	4707	3992	8700
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8702	28.011	NaN	2885.9	30	0	375.27	0.106	+			45488	TYDNVHQQF	9	69	576.259562150315	NaN	0	576.2594604492188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TYDNVHQQF_	ENSG00000138639|ENST00000395184|ARHGAP24;nc|ENSG00000138639|Q8N264-2|ARHGAP24;nc|ENSG00000138639|Q8N264-3|ARHGAP24	93.1432384553994	0.0352600271724948	1				NaN	NaN	0	NaN	4708	3992	8700
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8703	28.013	NaN	1155.5	30	0	312.94	0.036			+	-1	LTHVCCIVA	9	41	536.7695378539514	NaN	0	536.7689208984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_LTHVC(Carbamidomethyl (C))C(Carbamidomethyl (C))IVA_	REV__ENST00000549243.5_1_12:48152797-48154151:+|nuORF	26.79610172149135	0.34227917631780574	1				NaN	NaN	0	NaN	4709	3992	8700
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8708	28.027	NaN	1502.8	30	0	212.28	0.214	+			17505	IDFVTAIAF	9	44	498.7722026173621	995.5298523015242	2	498.77032470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IDFVTAIAF_	ENSG00000131725|ENST00000254029|WDR44;nc|ENSG00000131725|Q5JSH3-2|WDR44;nc|ENSG00000131725|Q5JSH3-3|WDR44;nc|ENSG00000131725|Q5JSH3-4|WDR44	52.936696900407355	0.27249468807391813	1				NaN	NaN	0	NaN	4711	3995	8707
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8709	28.031	NaN	2612.1	30	0	432.57	0.106	+			18760	ITNDGATILK	10	58	523.2976783239199	1044.5808037146396	2	523.8002319335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ITNDGATILK_	CCT4|p.T490Lfs*30|1|0.4|ENSG00000115484|chr2:61872105-61872105|T/-|frameshift_variant;ENSG00000115484|ENST00000394440|CCT4;ENSG00000120438|ENST00000321394|TCP1;ENST00000538128.5_2_6:160206507-160210586:-|nuORF;ENST00000543532.5_1_6:160205081-160210626:-|nuORF;ENST00000544255.5_1_6:160205081-160210586:-|nuORF;TCP1|p.A232Gfs*7|1|0.05|ENSG00000120438|chr6:159784043-159784044|-/C|frameshift_variant	120.27252224102466	0.026944837168485097	1				NaN	NaN	0	NaN	4712	3995	8707
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8710	28.033	NaN	1595.4	30	0	417.8	0.106			+	2758	ARGSPWGAL	9	50	457.74730655765455	NaN	0	457.74774169921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ARGSPWGAL_	REV__ENST00000530761.5_1_11:117857246-117857426:+|nuORF;REV__ENST00000534574.5_1_11:117857246-117857426:+|nuORF	38.80614096846853	0.28164298475537564	1				NaN	NaN	0	NaN	4713	3995	8707
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8711	28.035	NaN	2165.2	30	0	283.44	0.039	+			22326	KTFSQSTHLVQ	11	67	638.3386918564039	1274.6628307796077	2	638.3395385742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTFSQSTHLVQ_	ENSG00000187607|ENST00000583566|ZNF286A;ENST00000395894.6_1_17:15619323-15620601:+|nuORF;nc|ENSG00000187607|Q9HBT8-2|ZNF286A;nc|ENSG00000290687|P0CG31|ZNF286B	79.48907831485694	0.15663227531959176	1				NaN	NaN	0	NaN	4714	3995	8707
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8718	28.053	NaN	5690.2	30	0	2666.2	0.214	+			15897	HAALETQTL	9	56	492.261386470815	982.50822000843	2	492.26116943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HAALETQTL_	ENSG00000176945|ENST00000447234|MUC20;ENST00000457750.1_1_3:195341833-195346985:+|nuORF;nc|ENSG00000176945|Q8N307-3|MUC20	56.43379154798735	0.2433427591689151	1				NaN	NaN	0	NaN	4718	3998	8717
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8719	28.056	NaN	743.93	30	0	487.08	0.106			+	400	AASSIPLTLI	10	14	329.2013293316672	NaN	0	329.2012939453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AASSIPLTLI_	REV__tr|U7SND7|U7SND7_FUSNUPhosphotransferasesystemEIICdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01901PE=4SV=1	7.804521658770766	0.4201028297492154	1				NaN	NaN	0	NaN	4719	3998	8717
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8720	28.058	NaN	4429.2	30	0	469.62	0.106	+			34628	RVQEAVESMVK	11	51	425.8953999933989	1274.6643705803967	3	425.8956298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RVQEAVESMVK_	ENSG00000035141|ENST00000430566|FAM136A;ENST00000460307.1_1_2:70528513-70529143:-|nuORF;ENST00000498665.1_1_2:70527944-70529143:-|nuORF;nc|ENSG00000035141|Q96C01|FAM136A	58.62960593111931	0.3356877741313683	1				NaN	NaN	0	NaN	4720	3998	8717
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8721	28.06	NaN	1650.9	30	0	348.42	0.036	+			34534	RVIDILRGK	9	38	357.2326128624396	1068.676009187519	3	357.232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RVIDILRGK_	ENSG00000069399|ENST00000164227|BCL3	51.52775601994872	0.28504342437107444	1				NaN	NaN	0	NaN	4721	3998	8717
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8729	28.078	NaN	4289.7	30	0	617.32	0.214	+			28049	NAAQTSVAY	9	57	462.7255266650019	923.4365003968038	2	462.7243347167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAAQTSVAY_	ENSG00000113643|ENST00000231572|RARS1;nc|ENSG00000113643|P54136-2|RARS1	139.97047562133406	0.010493916756945389	1				NaN	NaN	0	NaN	4726	4001	8728
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8730	28.082	NaN	2044	30	0	402.27	0.106	+			35062	SAFGGSLPAK	10	49	467.7530734788654	933.4915940245309	2	467.75335693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAFGGSLPAK_	ENSG00000147874|ENST00000380502|HAUS6;HAUS6|p.S530Vfs*12|1|0.3|ENSG00000147874|chr9:19063049-19063049|T/-|frameshift_variant;nc|ENSG00000147874|Q7Z4H7-2|HAUS6;nc|ENSG00000147874|Q7Z4H7-3|HAUS6	61.691277971877994	0.35045824941635534	1				NaN	NaN	0	NaN	4727	4001	8728
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8731	28.084	NaN	1372.4	30	0	166.82	0.106				-1	STNCQKALT	9	55	511.74927783285534	NaN	0	511.7491760253906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_STNC(Carbamidomethyl (C))QKALT_	ENST00000286186.10_1_2:202050714-202052472:+|nuORF	45.97224482568171	0.23445038899310136	1				NaN	NaN	0	NaN	4728	4001	8728
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8732	28.086	NaN	4019.2	30	0	2088.6	0.037				-1	MISLKVCGFI	10	33	376.20470498289853	1125.5922855488957	3	376.204833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_M(Oxidation (M))ISLKVCGFI_	ENSG00000131864|ENST00000254181|USP29;USP29|p.V357Sfs*21|1|0.27|ENSG00000131864|chr19:57129738-57129738|A/-|frameshift_variant	18.262085536374414	0.7236521404371882	1				NaN	NaN	0	NaN	4729	4001	8728
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8738	28.102	NaN	3485.3	30	0	2263.3	0.214				-1	AVPCTVPH	8	54	440.7205552586714	879.4265575841429	2	440.7205505371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_AVPC(Carbamidomethyl (C))TVPH_	ENST00000482893.1_1_9:139650821-139651575:-|nuORF;ENST00000482893.1_1_9:139650821-139651575:-|nuORF	52.29916861842294	0.578018602984656	1				NaN	NaN	0	NaN	4732	4004	8737
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8739	28.105	NaN	7663.3	30	0	4426	0.106	+			25210	LMLGCFQLQEL	11	42	432.22218371187023	1293.6447217358107	3	432.2222595214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LMLGCFQLQEL_	ENSG00000074855|ENST00000159087|ANO8;nc|ENSG00000074855|Q9HCE9-2|ANO8	26.69291269510374	0.70980431218767	1				NaN	NaN	0	NaN	4733	4004	8737
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8740	28.107	NaN	2794.3	30	0	811.91	0.106	+			44178	TQTQFFHVK	9	49	379.2008780573688	1134.5808047723065	3	379.200927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TQTQFFHVK_	ENSG00000163564|ENST00000368140|PYHIN1;ENSG00000163565|ENST00000295809|IFI16;ENST00000485134.1_1_1:158911778-158914889:+|nuORF;ENST00000493884.5_1_1:158984458-159022017:+|nuORF;nc|ENSG00000163564|Q6K0P9-2|PYHIN1;nc|ENSG00000163564|Q6K0P9-3|PYHIN1;nc|ENSG00000163564|Q6K0P9-4|PYHIN1;nc|ENSG00000163565|Q16666-2|IFI16;nc|ENSG00000163565|Q16666-3|IFI16;nc|ENSG00000163565|Q16666-6|IFI16;nc|ENSG00000163565|Q16666-8|IFI16	40.05817265558897	0.419577045485086	1				NaN	NaN	0	NaN	4734	4004	8737
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8741	28.109	NaN	3156	30	0	854.29	0.106			+	7080	CVNLFLLSAQS	11	47	398.8785892657966	1193.61393839759	3	398.8785400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_CVNLFLLSAQS_	REV__ANGPTL5|p.E292Kfs*30|1|0.47|ENSG00000187151|chr11:101891573-101891573|T/-|frameshift_variant;REV__ENSG00000187151|ENST00000334289|ANGPTL5	20.31501182869353	0.7753667161465326	1				NaN	NaN	0	NaN	4735	4004	8737
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8742	28.111	NaN	1390.1	30	0	223.06	0.106			+	15873	GYLYGAIQA	9	45	478.24745292084043	954.4803529084809	2	478.24761962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GYLYGAIQA_	REV__ENSG00000174231|ENST00000304992|PRPF8	33.51558372728122	0.4900267029546261	1				NaN	NaN	0	NaN	4736	4004	8737
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8743	28.113	NaN	1975.5	30	0	346.17	0.106			+	9381	EKDWVTKEE	9	59	582.2820383903897	1162.5495238475794	2	582.2828369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EKDWVTKEE_	REV__TXLNA|p.R453W|1|0.08|ENSG00000084652|chr1:32194911-32194911|C/T|missense_variant	77.31757898189308	0.1091473830098891	1				NaN	NaN	0	NaN	4737	4004	8737
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8744	28.114	NaN	1049.9	30	0	279.95	0.035			+	22672	KTYTKNEI	8	22	332.84914584669275	995.5256081402783	3	332.84906005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KTYTKNEI_	REV__ENSG00000214944|ENST00000513042|ARHGEF28;REV__ENST00000510312.6_1_5:73178320-73193923:+|nuORF;REV__nc|ENSG00000214944|Q8N1W1-3|ARHGEF28;REV__nc|ENSG00000214944|Q8N1W1-4|ARHGEF28;REV__nc|ENSG00000214944|Q8N1W1-5|ARHGEF28;REV__nc|ENSG00000214944|Q8N1W1-6|ARHGEF28	15.641811463095205	0.7929430624199021	1				NaN	NaN	0	NaN	4738	4004	8737
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8755	28.138	NaN	10633	30	0	2547.5	0.214	+			35725	SDLRWSKQT	9	77	560.7905249675549	1119.5664970019097	2	560.7909545898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SDLRWSKQT_	ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1670Tfs*23|1|0.29|ENSG00000174231|chr17:1659487-1659487|C/-|frameshift_variant	54.722347961057174	0.257609425301511	1				NaN	NaN	0	NaN	4746	4007	8754
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8756	28.142	NaN	4160	30	0	1131	0.106				-1	TSLPSAICK	9	59	488.75978880857554	975.5050246839511	2	488.760009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_TSLPSAIC(Carbamidomethyl (C))K_	ENSG00000177731|ENST00000327031|FLII;ENST00000578101.5_1_17:18148454-18160363:-|nuORF;FLII|p.K628Rfs*27|1|0.37|ENSG00000177731|chr17:18249178-18249178|T/-|frameshift_variant;FLII|p.S470Afs*32|1|0.36|ENSG00000177731|chr17:18251454-18251454|G/-|frameshift_variant;nc|ENSG00000177731|Q13045-2|FLII;nc|ENSG00000177731|Q13045-3|FLII	51.19269402634007	0.2889735674168909	1				NaN	NaN	0	NaN	4747	4007	8754
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8757	28.144	NaN	2536.7	30	0	334.24	0.106	+			3170	ASIQKLPA	8	57	414.2523884697135	826.490224006227	2	414.2525329589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASIQKLPA_	ENSG00000135298|ENST00000370598|ADGRB3	37.15910966729921	0.6739408393984688	1				NaN	NaN	0	NaN	4748	4007	8754
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8758	28.146	NaN	1804.9	30	0	626.62	0.106			+	7700	DLMLEFTF	8	50	508.2451079373725	1014.475662941545	2	508.2450256347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DLMLEFTF_	REV__PARVB|p.A322T|1|0.45|ENSG00000188677|chr22:44163876-44163876|G/A|missense_variant	42.47446043378293	0.6409579893742323	1				NaN	NaN	0	NaN	4749	4007	8754
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8759	28.147	NaN	3264.2	30	0	559.54	0.106	+			48019	VSRCAPGKP	9	62	457.74730655765455	NaN	0	457.74639892578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSRCAPGKP_	ENSG00000251664|ENST00000398631|PCDHA12;nc|ENSG00000251664|Q9UN75-2|PCDHA12	44.116797842482775	0.2472372736944149	1				NaN	NaN	0	NaN	4750	4007	8754
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8760	28.149	NaN	1078.2	30	0	103.81	0.039	+			20183	KEKYIDQEEL	10	53	647.828747423922	1293.6429419146439	2	647.8302001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KEKYIDQEEL_	ENSG00000080824|ENST00000216281|HSP90AA1;ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000507090.2_1_4:13338641-13339112:+|nuORF;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;HSP90AA1|p.K419Nfs*3|1|0.25|ENSG00000080824|chr14:102083874-102083874|T/-|frameshift_variant;HSP90AA1|p.S330Qfs*48|1|0.21|ENSG00000080824|chr14:102084558-102084558|A/-|frameshift_variant;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000205940|Q58FF8|HSP90AB2P;nc|ENSG00000224411|Q14568|HSP90AA2P	66.9202029811203	0.3029018092171124	1				NaN	NaN	0	NaN	4751	4007	8754
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8772	28.175	NaN	4708.9	30	0	656.01	0.214	+			42385	TAIREAQTF	9	68	518.7749796672624	NaN	0	518.7749633789062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAIREAQTF_	BAZ1B|p.A1298Cfs*10|1|0.16|ENSG00000009954|chr7:73444083-73444084|-/G|frameshift_variant;ENSG00000009954|ENST00000339594|BAZ1B;nc|ENSG00000009954|Q9UIG0-2|BAZ1B	51.52775601994872	0.19616436856719055	1				NaN	NaN	0	NaN	4760	4010	8771
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8773	28.178	NaN	3160.6	30	0	618.72	0.106			+	35686	SDIKSVGL	8	54	409.73423912217544	817.4539253111509	2	409.734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SDIKSVGL_	REV__ENST00000553854.1_1_14:82128143-82128728:+|nuORF	84.9155231211612	0.2928622555056503	1				NaN	NaN	0	NaN	4761	4010	8771
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8774	28.18	NaN	1358.4	30	0	85.486	0.106	+			27246	MERIMKAQAL	10	56	595.8224608576288	NaN	0	595.8223876953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MERIMKAQAL_	ENSG00000080824|ENST00000216281|HSP90AA1;ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000378770.1_1_4:190394307-190396341:+|nuORF;ENST00000506915.1_1_4:190395906-190396341:+|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000205100|Q58FG1|HSP90AA4P	29.244998729987998	0.4041497342001781	1				NaN	NaN	0	NaN	4762	4010	8771
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8775	28.182	NaN	699.68	30	0	80.573	0.106			+	-1	DCRLYDAGPLM	11	35	663.7984719624094	NaN	0	663.7992553710938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_DC(Carbamidomethyl (C))RLYDAGPLM(Oxidation (M))_	REV__ENST00000497145.1_1_13:38145440-38145548:-|nuORF	16.71738777980365	0.456735970842152	1				NaN	NaN	0	NaN	4763	4010	8771
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8776	28.184	NaN	1097.3	30	0	145.8	0.035				-1	WGLCKLLT	8	52	495.77651834015916	NaN	0	495.77716064453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_WGLC(Carbamidomethyl (C))KLLT_	ENST00000301021.7_1_16:88928598-88928910:+|nuORF	25.450171626174864	1.7418937515398478	1				NaN	NaN	0	NaN	4764	4010	8771
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8785	28.206	NaN	3821.9	30	0	439.6	0.214			+	7925	DSGLLWAY	8	61	462.7255266650019	923.4365003968038	2	463.2289733886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DSGLLWAY_	REV__ENSG00000142197|ENST00000691173|DOP1B;REV__nc|ENSG00000142197|Q9Y3R5-2|DOP1B	37.028477286268924	0.6747514403204248	1				NaN	NaN	0	NaN	4770	4013	8784
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8786	28.209	NaN	4839.9	30	0	1242.8	0.106	+			38797	SSMTAVLQK	9	58	482.76146678154356	963.5083806298871	2	482.7599182128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSMTAVLQK_	ENST00000470658.1_1_21:44293721-44296875:-|nuORF	139.97047562133406	0.010493916756945389	1				NaN	NaN	0	NaN	4771	4013	8784
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8787	28.211	NaN	3295.1	30	0	627.73	0.106	+			36430	SEVAMHSL	8	55	437.21020903622633	872.4058651392527	2	437.2098693847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEVAMHSL_	ENSG00000100290|ENST00000216115|BIK	63.30626980617807	0.4690498839812213	1				NaN	NaN	0	NaN	4772	4013	8784
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8788	28.213	NaN	1947.8	30	0	242.3	0.106			+	-1	EGEFPAQGAL	10	57	530.7493300362144	1059.4841071392286	2	530.7496948242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))EGEFPAQGAL_	REV__ENSG00000166501|ENST00000643927|PRKCB;REV__nc|ENSG00000166501|P05771|PRKCB;REV__PRKCB|p.M534K|1|0.08|ENSG00000166501|chr16:24185178-24185178|T/A|missense_variant	36.446750945000026	0.5818864909973037	1				NaN	NaN	0	NaN	4773	4013	8784
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8789	28.215	NaN	1182.8	30	0	195.73	0.036				-1	IRDLSNNPM	9	50	538.2646484375	NaN	0	538.2646484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_IRDLSNNPM(Oxidation (M))_	ENSG00000104290|ENST00000240093|FZD3	29.170058357718403	0.3302935627494407	1				NaN	NaN	0	NaN	4774	4013	8784
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8798	28.236	NaN	4037.3	30	0	588.46	0.214			+	46586	VFPKEESH	8	65	486.7427488872522	971.4709448413045	2	486.7431335449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VFPKEESH_	REV__ENSG00000130684|ENST00000252979|ZNF337;REV__nc|ENSG00000130684|Q9Y3M9-2|ZNF337;REV__ZNF337|p.C518Lfs*33|1|0.34|ENSG00000130684|chr20:25675737-25675738|-/A|frameshift_variant	73.97473282117947	0.3737790450121076	1				NaN	NaN	0	NaN	4780	4016	8797
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8799	28.24	NaN	2192.1	30	0	222.73	0.106	+			33076	REKLQEEML	9	58	588.3073662108101	1174.60017948842	2	588.30908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_REKLQEEML_	ENSG00000026025|ENST00000544301|VIM;ENST00000485947.1_1_10:17271421-17272784:+|nuORF	50.033510581677724	0.3025703251535696	1				NaN	NaN	0	NaN	4781	4016	8797
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8800	28.242	NaN	1485.4	30	0	648.15	0.106				-1	 	0	48	458.7764987520998	915.5384445709997	2	460.7815246582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	4782	4016	8797
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8801	28.244	NaN	766.41	30	0	86.253	0.034	+			20935	KKAPPPSSV	9	41	455.7710266113281	NaN	0	455.7710266113281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KKAPPPSSV_	ENST00000508256.5_1_4:89205591-89205732:-|nuORF	26.69291269510374	0.34280015626154364	1				NaN	NaN	0	NaN	4783	4016	8797
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8810	28.264	NaN	18577	30	0	4476.4	0.215				-1	 	0	83	486.2975560738278	970.5805592144557	2	486.2983703613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	4789	4019	8809
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8811	28.267	NaN	4635.1	30	0	486.79	0.106	+			9144	EGLVHISEL	9	72	498.7722026173621	995.5298523015242	2	498.77593994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EGLVHISEL_	DHX8|p.R302W|1|0.06|ENSG00000067596|chr17:43493485-43493485|C/T|missense_variant;ENSG00000067596|ENST00000262415|DHX8;ENST00000587044.1_1_17:41568567-41594747:+|nuORF	62.107414245175825	0.1960472003779324	1				NaN	NaN	0	NaN	4790	4019	8809
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8812	28.269	NaN	1425.6	30	0	212.93	0.034			+	50334	WVATEPSQ	8	51	459.2230656279909	NaN	0	459.22412109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_WVATEPSQ_	REV__ENST00000276461.9_2_8:37612723-37612837:+|nuORF	45.9519527083369	1.7418937515398478	1				NaN	NaN	0	NaN	4791	4019	8809
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8821	28.291	NaN	2394.2	30	0	830.75	0.214	+			28796	NPHLSDVQF	9	64	528.7590664296038	1055.5035799260074	2	529.2609252929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NPHLSDVQF_	ENSG00000188827|ENST00000294008|SLX4;nc|ENSG00000188827|Q8IY92-2|SLX4;SLX4|p.P1414Hfs*36|1|0.43|ENSG00000188827|chr16:3589397-3589397|G/-|frameshift_variant;SLX4|p.P1420Qfs*30|1|0.59|ENSG00000188827|chr16:3589379-3589379|G/-|frameshift_variant	24.20275056022122	0.577060078256802	1				NaN	NaN	0	NaN	4797	4022	8820
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8822	28.294	NaN	1442.9	30	0	177.79	0.106				-1	EAKTEGLMK	9	52	511.76256430022414	1021.5105756672483	2	511.7631530761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_EAKTEGLM(Oxidation (M))K_	ENSG00000148516|ENST00000424869|ZEB1;ENST00000488625.6_1_10:31676182-31816189:+|nuORF;nc|ENSG00000148516|P37275-3|ZEB1;nc|ENSG00000148516|P37275-4|ZEB1;nc|ENSG00000148516|P37275-5|ZEB1;nc|ENSG00000148516|P37275|ZEB1	39.252832667884924	0.4290233611298554	1				NaN	NaN	0	NaN	4798	4022	8820
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8823	28.296	NaN	1700.1	30	0	340.22	0.106	+			23415	LAASTLLQQ	9	58	472.77406405628227	943.5335751793646	2	472.77374267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LAASTLLQQ_	ENSG00000178951|ENST00000322357|ZBTB7A	71.29570347882199	0.13518600952103718	1				NaN	NaN	0	NaN	4799	4022	8820
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8824	28.298	NaN	2227.6	30	0	391.25	0.106	+			10014	ERRLLVAES	9	56	536.8088668244903	1071.6031807157806	2	536.8099975585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ERRLLVAES_	ENSG00000134444|ENST00000644646|RELCH;nc|ENSG00000134444|Q9P260-2|RELCH;nc|ENSG00000134444|Q9P260|RELCH	17.468008924990375	0.6112419832031292	1				NaN	NaN	0	NaN	4800	4022	8820
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8825	28.3	NaN	622.47	30	0	52.743	0.106				-1	TYMVMAAIL	9	40	522.7607303056448	NaN	0	522.760986328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Oxidation (M)	_TYM(Oxidation (M))VM(Oxidation (M))AAIL_	ENSG00000008710|ENST00000262304|PKD1;ENST00000471603.6_1_16:2149506-2153410:-|nuORF;ENST00000480227.5_1_16:2149506-2153780:-|nuORF;ENST00000532739.1_1_16:16465196-16470832:+|nuORF;ENST00000537112.5_1_16:16421763-16427707:+|nuORF;ENST00000541836.5_1_16:15021147-15029115:+|nuORF;nc|ENSG00000008710|P98161-2|PKD1;nc|ENSG00000008710|P98161-3|PKD1	25.450171626174864	0.34907449758287085	1				NaN	NaN	0	NaN	4801	4022	8820
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8826	28.302	NaN	889.7	30	0	122.47	0.035			+	-1	TELVCPLLM	9	51	517.768310546875	NaN	0	517.768310546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_TELVCPLLM(Oxidation (M))_	REV__ENST00000464249.1_1_6:170068793-170070720:-|nuORF	28.2542754592877	0.3349171602345879	1				NaN	NaN	0	NaN	4802	4022	8820
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8836	28.325	NaN	4138.6	30	0	1418.6	0.214	+			7296	DASGAKLDY	9	64	470.22452849120094	938.4345040492019	2	470.2241516113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DASGAKLDY_	BZW1|p.N285Tfs*11|2|0.26|ENSG00000082153|chr2:200818782-200818782|A/-|frameshift_variant;BZW1|p.N286*|1|0.04|ENSG00000082153|chr2:200818790-200818791|-/T|frameshift_variant;BZW1|p.S325Rfs*19|1|0.04|ENSG00000082153|chr2:200819989-200819990|-/ACAATATAGAA|frameshift_variant;ENSG00000082153|ENST00000409600|BZW1;ENST00000464483.1_1_2:201677931-201680272:+|nuORF;nc|ENSG00000082153|Q7L1Q6-2|BZW1;nc|ENSG00000082153|Q7L1Q6-3|BZW1;nc|ENSG00000082153|Q7L1Q6-4|BZW1	88.17693792209575	0.07000514020414955	1				NaN	NaN	0	NaN	4809	4025	8835
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8837	28.329	NaN	6924	30	0	3942.1	0.106	+			49978	WAGPGWGRRL	10	41	385.876604802272	1154.6079850070162	3	385.8766174316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WAGPGWGRRL_	ENST00000455441.5_1_3:186648403-186648589:+|nuORF	37.81151784470057	0.569310847604193	1				NaN	NaN	0	NaN	4810	4025	8835
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8838	28.331	NaN	4396.2	30	0	772.11	0.106	+			49201	VVMVNQGLTK	10	68	544.8094381943257	1087.6043234554513	2	544.8108520507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVMVNQGLTK_	ENSG00000134057|ENST00000256442|CCNB1	150.81021883065287	0.008351675499118036	1				NaN	NaN	0	NaN	4811	4025	8835
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8839	28.332	NaN	1944.8	30	0	143.46	0.106			+	-1	KNIALAQCL	9	52	515.7922124983002	NaN	0	515.7910766601562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_KNIALAQC(Carbamidomethyl (C))L_	REV__ENSG00000103152|ENST00000356432|MPG;REV__nc|ENSG00000103152|P29372-2|MPG;REV__nc|ENSG00000103152|P29372-5|MPG;REV__nc|ENSG00000103152|P29372|MPG	44.116797842482775	0.2472372736944149	1				NaN	NaN	0	NaN	4812	4025	8835
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8840	28.334	NaN	1649	30	0	613.2	0.106			+	25562	LPWPRASP	8	49	462.25990480645595	NaN	0	462.2599182128906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LPWPRASP_	REV__ENSG00000181513|ENST00000321854|ACBD4;REV__ENST00000431281.5_1_17:43214735-43220935:+|nuORF	23.04248740728303	1.7418937515398478	1				NaN	NaN	0	NaN	4813	4025	8835
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8841	28.336	NaN	852.18	30	0	76.178	0.035	+			49401	VVTGRKLLQ	9	53	507.3265075683594	NaN	0	507.3265075683594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VVTGRKLLQ_	CON__Q28065	32.81241826257853	0.3119040447479903	1				NaN	NaN	0	NaN	4814	4025	8835
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8852	28.361	NaN	3255.9	30	0	1196.3	0.141			+	5594	AVATRPSAL	9	48	443.2607218766677	884.5068908201354	2	443.2608642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVATRPSAL_	REV__ENSG00000167978|ENST00000301740|SRRM2;REV__SRRM2|p.P2670Lfs*13|1|0.08|ENSG00000167978|chr16:2769268-2769268|C/-|frameshift_variant	45.97224482568171	0.3502073465782774	1				NaN	NaN	0	NaN	4822	4028	8851
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8863	28.389	NaN	2816.6	30	0	949.13	0.214				-1	 	0	40	392.7552761983581	783.4959994635162	2	392.75537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	4830	4031	8862
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8864	28.392	NaN	2266.4	30	0	229.68	0.106			+	36603	SGDLEIGAGVL	11	61	515.7738902771974	1029.5332276211948	2	515.7738647460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SGDLEIGAGVL_	REV__ENSG00000189431|ENST00000529419|RASSF10	40.77816245573522	0.5472954108598816	1				NaN	NaN	0	NaN	4831	4031	8862
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8865	28.394	NaN	1656.2	30	0	805.33	0.106				-1	SVREAMLW	8	17	336.50395465187535	1006.490034555826	3	336.5041198730469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_SVREAM(Oxidation (M))LW_	ENSG00000134905|ENST00000257347|CARS2;ENST00000535398.5_1_13:111298395-111353838:-|nuORF;ENST00000535516.5_1_13:111299446-111303026:-|nuORF;ENST00000537404.1_1_13:111299446-111303474:-|nuORF;ENST00000537802.5_1_13:111299446-111300713:-|nuORF;ENST00000540006.5_1_13:111296932-111315941:-|nuORF;ENST00000545506.5_1_13:111299446-111317899:-|nuORF	18.324413293986947	0.7971860551947066	1				NaN	NaN	0	NaN	4832	4031	8862
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8866	28.396	NaN	1664.7	30	0	541.87	0.106			+	16601	HGKLYERI	8	51	508.2872449925745	1014.559937051949	2	508.2881774902344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HGKLYERI_	REV__ANKLE2|p.R467Q|1|0.13|ENSG00000176915|chr12:132741439-132741439|C/T|missense_variant;REV__ENSG00000176915|ENST00000357997|ANKLE2;REV__ENST00000439231.6_1_12:133310604-133318035:-|nuORF;REV__ENST00000538591.5_1_12:133311987-133319805:-|nuORF;REV__nc|ENSG00000176915|Q86XL3-2|ANKLE2	65.80317337860623	0.44433089765398776	1				NaN	NaN	0	NaN	4833	4031	8862
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8867	28.398	NaN	2193.1	30	0	293.2	0.106	+			38883	SSNVQVMLK	9	55	503.2736801209065	1004.532807308613	2	503.2732849121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSNVQVMLK_	ENST00000456324.5_1_19:36726911-36727052:+|nuORF	58.2462437865262	0.22823408064396822	1				NaN	NaN	0	NaN	4834	4031	8862
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8868	28.4	NaN	261.52	30	0	31.859	0.039	+			22327	KTFSQSTHLVQ	11	22	638.3386918564039	1274.6628307796077	2	638.3399658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KTFSQSTHLVQ_	ENSG00000187607|ENST00000583566|ZNF286A;ENST00000395894.6_1_17:15619323-15620601:+|nuORF;nc|ENSG00000187607|Q9HBT8-2|ZNF286A;nc|ENSG00000290687|P0CG31|ZNF286B	20.83715455343099	0.7712264395190968	1				NaN	NaN	0	NaN	4835	4031	8862
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8869	28.4	NaN	793.71	30	0	35.148	0.142			+	28261	NDMVYKAL	8	48	477.2413330078125	NaN	0	477.2413330078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NDMVYKAL_	REV__tr|U7SU67|U7SU67_FUSNUNon-specificserine/threonineproteinkinaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01120PE=4SV=1	55.50420428727701	1.7418937515398478	1				NaN	NaN	0	NaN	4836	4031	8862
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8881	28.427	NaN	11486	30	0	3069	0.214				-1	 	0	71	458.7764987520998	915.5384445709997	2	458.7764892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	4845	4034	8880
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8882	28.431	NaN	3379.1	30	0	432.46	0.106	+			49549	VYASDRATF	9	67	515.2531312688161	1028.4917096044321	2	515.2533569335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYASDRATF_	ENSG00000198721|ENST00000380118|ECI2;ENST00000380120.6_1_6:4116110-4130812:-|nuORF;ENST00000464057.5_1_6:4116110-4125894:-|nuORF;ENST00000464583.5_1_6:4119386-4125894:-|nuORF;ENST00000496241.6_1_6:4116110-4130478:-|nuORF;nc|ENSG00000198721|O75521-2|ECI2	87.69643885390035	0.07135982304947239	1				NaN	NaN	0	NaN	4846	4034	8880
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8883	28.433	NaN	2871.5	30	0	1349.2	0.106	+			45976	VATEKAVEL	9	53	480.273781365224	958.533009797248	2	480.27362060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VATEKAVEL_	ENSG00000163931|ENST00000462138|TKT;ENST00000460243.1_1_3:53262881-53263452:-|nuORF;ENST00000460343.5_1_3:53261754-53265639:-|nuORF;ENST00000461139.5_1_3:53259774-53265639:-|nuORF;ENST00000469678.1_1_3:53259917-53265542:-|nuORF;nc|ENSG00000163931|P29401-2|TKT	60.11826168202944	0.21262886028301267	1				NaN	NaN	0	NaN	4847	4034	8880
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8884	28.435	NaN	1252	30	0	146.05	0.106	+			16383	HENIVIAKM	9	55	527.7896179590069	1053.5646829848138	2	527.7901611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HENIVIAKM_	ENSG00000185624|ENST00000331483|P4HB	65.46538089061403	0.16805504838372562	1				NaN	NaN	0	NaN	4848	4034	8880
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8885	28.437	NaN	1282.2	30	0	199.12	0.106	+			18370	IQSTVMLDK	9	51	517.7805990506292	NaN	0	517.7806396484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IQSTVMLDK_	ENSG00000115415|ENST00000361099|STAT1;nc|ENSG00000115415|P42224-2|STAT1;STAT1|p.D534Mfs*14|1|0.24|ENSG00000115415|chr2:190980653-190980653|G/-|frameshift_variant;STAT1|p.K567Nfs*25|2|0.2|ENSG00000115415|chr2:190979798-190979798|T/-|frameshift_variant	58.22992032128504	0.15686832049467786	1				NaN	NaN	0	NaN	4849	4034	8880
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8886	28.438	NaN	2195.3	30	0	255.09	0.035	+			38884	SSNVQVMLK	9	59	503.2736801209065	1004.532807308613	2	503.2733459472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSNVQVMLK_	ENST00000456324.5_1_19:36726911-36727052:+|nuORF	82.7504851949679	0.08565546331141553	1				NaN	NaN	0	NaN	4850	4034	8880
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8887	28.439	NaN	717.98	30	0	139.26	0.138			+	13096	GGAALSMR	8	29	381.70039435502946	NaN	0	381.70013427734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GGAALSMR_	REV__ENSG00000113430|ENST00000231357|IRX4;REV__nc|ENSG00000113430|P78413-2|IRX4	18.324413293986947	1.7418937515398478	1				NaN	NaN	0	NaN	4851	4034	8880
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8892	28.455	NaN	2359.8	30	0	725.89	0.214	+			5319	ATVLYIVKK	9	34	345.5583696205341	1033.6532794618024	3	345.55853271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATVLYIVKK_	ENSG00000113734|ENST00000351486|BNIP1;nc|ENSG00000113734|Q12981-1|BNIP1;nc|ENSG00000113734|Q12981-2|BNIP1;nc|ENSG00000113734|Q12981-3|BNIP1	54.776311868738084	0.25715957988447635	1				NaN	NaN	0	NaN	4853	4037	8891
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8893	28.459	NaN	1985.7	30	0	180.45	0.106			+	-1	GVDTLKMGV	9	57	468.247122334369	934.479691735538	2	468.7478332519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_GVDTLKM(Oxidation (M))GV_	REV__ENSG00000198796|ENST00000361673|ALPK2	34.172542307311794	0.4838870758800184	1				NaN	NaN	0	NaN	4854	4037	8891
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8894	28.461	NaN	1192.6	30	0	102.32	0.106	+			38223	SQICIQVSK	9	43	531.7843410942799	1061.5541292553596	2	531.78515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SQIC(Carbamidomethyl (C))IQVSK_	ENSG00000110367|ENST00000534980|DDX6;ENST00000441966.1_1_6:29297957-29298365:-|nuORF	53.59686742100583	0.26699147868981316	1				NaN	NaN	0	NaN	4855	4037	8891
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8895	28.462	NaN	1450.1	30	0	171.37	0.034	+			6068	AVMSATFAK	9	53	463.24382362000625	924.4730943068125	2	463.2435302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVMSATFAK_	ENSG00000077380|ENST00000397119|DYNC1I2;ENST00000435916.1_1_10:52025510-52026503:+|nuORF;ENST00000479806.1_1_2:172583261-172604396:+|nuORF;nc|ENSG00000077380|Q13409-2|DYNC1I2;nc|ENSG00000077380|Q13409-3|DYNC1I2;nc|ENSG00000077380|Q13409-5|DYNC1I2;nc|ENSG00000077380|Q13409-6|DYNC1I2;nc|ENSG00000077380|Q13409-7|DYNC1I2	64.20726635412375	0.17854274437659667	1				NaN	NaN	0	NaN	4856	4037	8891
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8902	28.479	NaN	1934	30	0	276.13	0.145			+	28701	NNEKLFNII	9	35	368.8739329725041	1103.5999695177125	3	368.874267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NNEKLFNII_	REV__tr|U7STQ9|U7STQ9_FUSNUTrmHfamilyRNAmethyltransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01153PE=4SV=1	52.936696900407355	0.27249468807391813	1				NaN	NaN	0	NaN	4860	4040	8901
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8910	28.501	NaN	1516.2	30	0	179.38	0.214	+			28191	NASKGIYAM	9	52	477.7390541908985	953.463555448597	2	477.7393493652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NASKGIYAM_	ENSG00000142945|ENST00000372224|KIF2C;nc|ENSG00000142945|Q99661-2|KIF2C	52.936696900407355	0.27249468807391813	1				NaN	NaN	0	NaN	4865	4043	8909
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8911	28.504	NaN	1506.4	30	0	512.57	0.039			+	-1	VNFSPMQLKPL	11	46	430.56793212890625	NaN	0	430.56793212890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_VNFSPM(Oxidation (M))QLKPL_	REV__AHNAK2|p.K4390N|1|0.37|ENSG00000185567|chr14:104942281-104942281|C/A|missense_variant	31.634271133179894	0.4244354679066847	1				NaN	NaN	0	NaN	4866	4043	8909
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8935	28.571	NaN	1368.6	30	0	217.56	0.143			+	17962	IGTHFYNK	8	46	490.2532333185657	978.4919137039315	2	490.2528076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IGTHFYNK_	REV__tr|U7T295|U7T295_FUSNUSmallribosomalsubunitproteinuS3OS=FusobacteriumnucleatumCTI-5OX=1316586GN=rpsCPE=3SV=1	30.503639358989545	0.7238069182250283	1				NaN	NaN	0	NaN	4881	4052	8934
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8942	28.589	NaN	6271.7	30	0	1869.1	0.214	+			39003	SSSGFVAIK	9	57	448.24766484164337	894.4807767500868	2	448.2474365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSSGFVAIK_	ENSG00000198478|ENST00000369838|SH3BGRL2;SH3BGRL2|p.P55Rfs*41|2|0.28|ENSG00000198478|chr6:79673727-79673727|C/-|frameshift_variant	138.8255168832474	0.011031062795199845	1				NaN	NaN	0	NaN	4885	4055	8941
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8943	28.593	NaN	2520.3	30	0	199.31	0.106	+			7778	DPEGSRITY	9	59	519.2482069059071	1036.481860878614	2	519.2484130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DPEGSRITY_	ENSG00000124596|ENST00000424266|OARD1;ENST00000465893.1_1_6:41037763-41039373:-|nuORF	78.26377905018397	0.10505600812668463	1				NaN	NaN	0	NaN	4886	4055	8941
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8944	28.595	NaN	1912.1	30	0	351.61	0.034				-1	 	0	60	486.2975560738278	970.5805592144557	2	486.2979431152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	4887	4055	8941
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8953	28.615	NaN	3076.7	30	0	488.37	0.214	+			42363	TAIGMPVEK	9	64	473.25697374257646	944.499394551953	2	473.2571105957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAIGMPVEK_	ENSG00000109736|ENST00000355443|MFSD10;ENST00000509676.1_1_4:2934766-2935650:-|nuORF;MFSD10|p.S111Gfs*48|1|0.44|ENSG00000109736|chr4:2933125-2933147|GGGCGCCTCCCCAAGCAGTCAGA/-|frameshift_variant	60.11826168202944	0.21262886028301267	1				NaN	NaN	0	NaN	4893	4058	8952
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8954	28.618	NaN	2312.7	30	0	453.64	0.034	+			1302	AESVVPARM	9	54	480.25223733815255	958.4899217431051	2	480.2529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AESVVPARM_	ENSG00000167508|ENST00000301012|MVD;ENST00000565149.5_1_16:88718935-88722722:-|nuORF	68.78682469695295	0.14603441672067394	1				NaN	NaN	0	NaN	4894	4058	8952
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8959	28.633	NaN	2906.1	30	0	694.05	0.214			+	24699	LHETSFAP	8	54	451.22413061704987	900.4337083008998	2	451.2240295410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LHETSFAP_	REV__ENSG00000166106|ENST00000299164|ADAMTS15	35.200714571348534	0.6875396545722289	1				NaN	NaN	0	NaN	4896	4061	8958
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8960	28.636	NaN	919.5	30	0	215.82	0.106			+	19072	IYHPQTDQ	8	49	501.2367858886719	NaN	0	501.2367858886719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IYHPQTDQ_	REV__DYNC1H1|p.K3112Hfs*3|1|0.31|ENSG00000197102|chr14:102027998-102027999|-/TCACAAG|frameshift_variant;REV__DYNC1H1|p.W4201Gfs*43|1|0.42|ENSG00000197102|chr14:102043958-102043958|G/-|frameshift_variant;REV__ENSG00000197102|ENST00000360184|DYNC1H1	35.61828744233558	1.7418937515398478	1				NaN	NaN	0	NaN	4897	4061	8958
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8961	28.638	NaN	914.94	30	0	70.381	0.038	+			33692	RPDEKAIMTY	10	42	612.3071102251249	1222.5996675170497	2	612.307861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RPDEKAIMTY_	ENSG00000072110|ENST00000394419|ACTN1;ENSG00000130402|ENST00000252699|ACTN4;ENST00000554508.5_1_14:69367621-69387744:-|nuORF;ENST00000588618.5_1_19:39138385-39212431:+|nuORF;nc|ENSG00000072110|P12814-2|ACTN1;nc|ENSG00000072110|P12814-4|ACTN1;nc|ENSG00000072110|P12814|ACTN1	23.52269567125451	0.6877354443478558	1				NaN	NaN	0	NaN	4898	4061	8958
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8966	28.652	NaN	2710.1	30	0	361.97	0.214			+	13047	GEWAAAQSPSA	11	62	537.7460022253767	1073.4774515175534	2	537.7461547851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEWAAAQSPSA_	REV__ENST00000515332.5_1_4:108746149-108816471:+|nuORF	45.02220120713402	0.4892240028381124	1				NaN	NaN	0	NaN	4900	4064	8965
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8967	28.656	NaN	1393.1	30	0	134.8	0.034	+			43326	TGASVIRAY	9	46	469.2585068174537	936.5024607017074	2	469.2591857910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TGASVIRAY_	ENSG00000108846|ENST00000285238|ABCC3;ENST00000502426.5_1_17:48736553-48755440:+|nuORF;nc|ENSG00000108846|O15438-2|ABCC3;nc|ENSG00000108846|O15438-4|ABCC3	67.49366992349736	0.1516260258713357	1				NaN	NaN	0	NaN	4901	4064	8965
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8974	28.674	NaN	5236.2	30	0	617.71	0.214				-1	 	0	65	478.76134026774815	955.5081276022963	2	478.7611999511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	4905	4067	8973
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8975	28.678	NaN	7134.5	30	0	1172.5	0.106	+			40277	STSQTFIYK	9	76	537.7767033401599	1073.5388537471197	2	537.7775268554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STSQTFIYK_	ENSG00000004487|ENST00000400181|KDM1A;nc|ENSG00000004487|O60341|KDM1A	126.24258497203832	0.01742065577488747	1				NaN	NaN	0	NaN	4906	4067	8973
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8976	28.68	NaN	4273.8	30	0	1070.3	0.106	+			40308	STSSVIMMK	9	55	492.24818109685924	982.4818092605185	2	492.247802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STSSVIMMK_	ENST00000521804.1_1_8:142264568-142318349:-|nuORF	87.69643885390035	0.07135982304947239	1				NaN	NaN	0	NaN	4907	4067	8973
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8977	28.681	NaN	1692.2	30	0	256.15	0.034	+			30315	PTPSLGDQGC	10	46	487.71572952033347	973.416906107467	2	487.7156982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PTPSLGDQGC_	ENST00000472541.5_1_1:1235057-1244982:-|nuORF	29.170058357718403	0.6416167986984785	1				NaN	NaN	0	NaN	4908	4067	8973
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8985	28.701	NaN	4167.4	30	0	566.16	0.141			+	36194	SELLAQTL	8	59	437.74746548976657	873.4803780463332	2	437.7475280761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SELLAQTL_	REV__ENST00000397128.6_1_5:40760712-40760853:-|nuORF	90.36981228632155	0.27635063874291205	1				NaN	NaN	0	NaN	4913	4070	8984
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8992	28.72	NaN	1505.8	30	0	158.7	0.214			+	-1	KQSSFCKLQ	9	62	563.2891166957148	1124.5636804582296	2	563.2896118164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_KQSSFC(Carbamidomethyl (C))KLQ_	REV__nc|ENSG00000187021|P54315-2|PNLIPRP1	49.44154591367651	0.3095138337212152	1				NaN	NaN	0	NaN	4917	4073	8991
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8993	28.723	NaN	1514.5	30	0	224.17	0.106	+			7175	DAGPPTHAF	9	48	456.71394471872895	911.4133365042579	2	456.71380615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DAGPPTHAF_	ENSG00000139946|ENST00000267460|PELI2;ENSG00000197329|ENST00000358912|PELI1	30.503639358989545	0.5181749237905803	1				NaN	NaN	0	NaN	4918	4073	8991
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8994	28.725	NaN	1179.4	30	0	208.08	0.106			+	30461	QACSAQASIDP	11	41	545.7453009170324	NaN	0	545.7450561523438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QACSAQASIDP_	REV__ENST00000453634.5_3_22:51014735-51015826:-|nuORF	30.568863376406313	0.42918353898720446	1				NaN	NaN	0	NaN	4919	4073	8991
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8995	28.727	NaN	2653.2	30	0	791.43	0.038			+	7667	DLAPEVSVLYT	11	44	402.8797445379654	1205.6174042140963	3	402.8803405761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DLAPEVSVLYT_	REV__ENSG00000179832|ENST00000326134|MROH1;REV__ENST00000532255.5_1_8:145218705-145305309:+|nuORF;REV__ENST00000544576.1_1_8:145297127-145303835:+|nuORF;REV__MROH1|p.P1048Qfs*9|1|0.21|ENSG00000179832|chr8:144248894-144248894|C/-|frameshift_variant;REV__nc|ENSG00000179832|Q8NDA8-2|MROH1	26.749707702089633	0.7092085788826945	1				NaN	NaN	0	NaN	4920	4073	8991
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9001	28.743	NaN	2909.6	30	0	331.03	0.214	+			10966	FEAQGKPEL	9	67	509.763254036928	1017.511955140656	2	509.7643737792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FEAQGKPEL_	ENSG00000088356|ENST00000202017|PDRG1	68.62578634547417	0.14673074753754126	1				NaN	NaN	0	NaN	4923	4076	9000
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9002	28.747	NaN	1833	30	0	712.45	0.106	+			47505	VQLAPVMQL	9	49	499.79031488720085	997.5660768412017	2	499.7904357910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VQLAPVMQL_	ENSG00000198788|ENST00000675028|MUC2;nc|ENSG00000198788|Q02817|MUC2	73.97473282117947	0.12360187025703594	1				NaN	NaN	0	NaN	4924	4076	9000
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9003	28.749	NaN	3453.6	30	0	845.6	0.034	+			48810	VVAFPTDSK	9	57	482.26053060960487	962.5065082860098	2	482.2601318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVAFPTDSK_	ENSG00000149418|ENST00000278742|ST14	54.776311868738084	0.25715957988447635	1				NaN	NaN	0	NaN	4925	4076	9000
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9015	28.774	NaN	8739.7	30	0	2347.5	0.214	+			23710	LAVDKSASL	9	71	452.2606856513751	902.5068183695503	2	452.2606201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LAVDKSASL_	ENSG00000065526|ENST00000375759|SPEN;SPEN|p.A2105Lfs*33|1|0.46|ENSG00000065526|chr1:15932548-15932548|G/-|frameshift_variant;SPEN|p.A2251Qfs*102|3|0.29|ENSG00000065526|chr1:15932985-15932985|C/-|frameshift_variant	93.1432384553994	0.056003526918089595	1				NaN	NaN	0	NaN	4934	4079	9014
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9016	28.778	NaN	3493.7	30	0	511.27	0.106	+			23967	LDTLKTQL	8	62	466.2763073580279	930.5380617828558	2	466.2763366699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LDTLKTQL_	ENSG00000046651|ENST00000340096|OFD1;ENST00000380567.5_2_X:13753187-13758224:+|nuORF;ENST00000490265.5_1_X:13753187-13770868:+|nuORF;nc|ENSG00000046651|O75665-2|OFD1;nc|ENSG00000046651|O75665-3|OFD1;OFD1|p.I117Sfs*28|1|0.59|ENSG00000046651|chrX:13738879-13738879|A/-|frameshift_variant	62.107414245175825	0.4809183816468817	1				NaN	NaN	0	NaN	4935	4079	9014
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9017	28.78	NaN	1250.5	30	0	142.77	0.106	+			35026	SACTKPVLE	9	52	474.248997430449	NaN	0	474.25115966796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SACTKPVLE_	ENST00000491177.1_1_1:153599613-153600015:-|nuORF	29.170058357718403	0.3302935627494407	1				NaN	NaN	0	NaN	4936	4079	9014
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9018	28.781	NaN	1180	30	0	159.79	0.106			+	-1	YDRIREWRCSI	11	44	518.594482421875	NaN	0	518.594482421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_YDRIREWRC(Carbamidomethyl (C))SI_	REV__SLIT2|p.G1455W|1|0.26|ENSG00000145147|chr4:20618782-20618782|G/T|missense_variant	13.507942900623993	0.456735970842152	1				NaN	NaN	0	NaN	4937	4079	9014
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9019	28.783	NaN	2087.8	30	0	676.35	0.106	+			3183	ASKIEALHK	9	38	332.8659016617896	995.5758755855688	3	332.8660583496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASKIEALHK_	ENSG00000101972|ENST00000371145|STAG2;nc|ENSG00000101972|Q8N3U4|STAG2;STAG2|p.T1208Kfs*3|1|0.87|ENSG00000101972|chrX:124095400-124095400|C/-|frameshift_variant	21.9598887501803	0.5980208138527809	1				NaN	NaN	0	NaN	4938	4079	9014
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9020	28.785	NaN	849.86	30	0	92.181	0.034	+			50572	YAYRCVPP	8	43	484.7372521232816	NaN	0	484.7369384765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YAYRCVPP_	ENSG00000196159|ENST00000394329|FAT4;FAT4|p.E4539Rfs*31|1|0.12|ENSG00000196159|chr4:125490431-125490431|C/-|frameshift_variant;FAT4|p.K4477Rfs*15|1|0.36|ENSG00000196159|chr4:125490247-125490247|G/-|frameshift_variant;FAT4|p.K4532Efs*21|1|0.37|ENSG00000196159|chr4:125490410-125490411|-/G|frameshift_variant;FAT4|p.K4532Rfs*38|1|0.19|ENSG00000196159|chr4:125490411-125490411|G/-|frameshift_variant;FAT4|p.Q4906Rfs*14|1|0.49|ENSG00000196159|chr4:125491536-125491536|C/-|frameshift_variant;nc|ENSG00000196159|Q6V0I7-2|FAT4;nc|ENSG00000196159|Q6V0I7-3|FAT4;nc|ENSG00000196159|Q6V0I7|FAT4	29.841539824830324	1.7418937515398478	1				NaN	NaN	0	NaN	4939	4079	9014
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9031	28.81	NaN	1481.1	30	0	243.93	0.214	+			24683	LGYVAAGHAE	10	62	494.2481200161853	986.4816870991706	2	494.2479248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LGYVAAGHAE_	ENSG00000164488|ENST00000366795|DACT2;nc|ENSG00000164488|Q5SW24-2|DACT2;nc|ENSG00000164488|Q5SW24-3|DACT2	53.351449002276354	0.42630798468005626	1				NaN	NaN	0	NaN	4947	4082	9030
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9032	28.814	NaN	1745.8	30	0	186.76	0.106	+			23264	KYKASITAL	9	57	497.8002984877939	993.5860440423878	2	497.78204345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KYKASITAL_	ENSG00000100345|ENST00000216181|MYH9;ENST00000475726.5_1_22:36680347-36682008:-|nuORF;ENST00000486218.1_1_22:36680427-36682008:-|nuORF;nc|ENSG00000100345|P35579-2|MYH9;SYNDIG1-MYH9|1|fusion	39.252832667884924	0.4290233611298554	1				NaN	NaN	0	NaN	4948	4082	9030
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9033	28.816	NaN	3250.5	30	0	760.46	0.106			+	-1	SLWCIAFTCVV	11	49	433.54749896883146	1297.6206675066944	3	433.5472717285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SLWCIAFTC(Carbamidomethyl (C))VV_	REV__TACR1|p.P263S|1|0.22|ENSG00000115353|chr2:75051396-75051396|G/A|missense_variant	25.125986553469783	0.7262400895305658	1				NaN	NaN	0	NaN	4949	4082	9030
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9034	28.818	NaN	1657.9	30	0	936.44	0.037				-1	EGKQLVASVSC	11	46	589.2971165056904	1176.5796800781807	2	589.2978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_EGKQLVASVSC(Carbamidomethyl (C))_	ENSG00000054654|ENST00000555002|SYNE2;ENST00000394768.6_2_14:64542710-64692241:+|nuORF;nc|ENSG00000054654|Q8WXH0-7|SYNE2;nc|ENSG00000054654|Q8WXH0|SYNE2;SYNE2|p.A5240Qfs*5|1|0.07|ENSG00000054654|chr14:64152639-64152639|G/-|frameshift_variant;SYNE2|p.F4992Lfs*13|1|0.39|ENSG00000054654|chr14:64140067-64140067|T/-|frameshift_variant;SYNE2|p.L5308Ifs*18|1|0.12|ENSG00000054654|chr14:64158750-64158751|GG/-|frameshift_variant;SYNE2|p.S6651Rfs*83|1|0.29|ENSG00000054654|chr14:64220596-64220597|-/G|frameshift_variant	21.68575002086885	0.7623253651248338	1				NaN	NaN	0	NaN	4950	4082	9030
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9044	28.841	NaN	5208.8	30	0	942.17	0.214	+			45817	VAIKAGTTL	9	60	437.2735026821773	872.5324524311546	2	437.2735595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VAIKAGTTL_	ENSG00000166471|ENST00000528080|TMEM41B;ENST00000524543.5_1_11:9304973-9316821:-|nuORF;ENST00000533867.1_1_11:9304973-9309374:-|nuORF	63.53385203322761	0.18415635464017938	1				NaN	NaN	0	NaN	4957	4085	9043
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9045	28.845	NaN	2776.1	30	0	815.76	0.106	+			40961	SVGAKNATL	9	49	430.74528939652004	859.4760258598401	2	430.7453308105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVGAKNATL_	ENSG00000063244|ENST00000308924|U2AF2;nc|ENSG00000063244|P26368-2|U2AF2	60.11826168202944	0.21262886028301267	1				NaN	NaN	0	NaN	4958	4085	9043
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9046	28.847	NaN	1273.2	30	0	191.05	0.106	+			30283	PTHSRIRK	8	54	497.8002984877939	993.5860440423878	2	497.8000183105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PTHSRIRK_	ENST00000585445.1_1_19:57005601-57005742:+|nuORF	32.81241826257853	0.7059802730411993	1				NaN	NaN	0	NaN	4959	4085	9043
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9047	28.848	NaN	2324.9	30	0	242.68	0.035	+			27602	MPNGTVQRF	9	70	525.2630319736616	1048.511511014123	2	525.2651977539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MPNGTVQRF_	BPTF|p.D2844Afs*20|1|0.08|ENSG00000171634|chr17:67959766-67959767|-/C|frameshift_variant;BPTF|p.K2718Nfs*36|3|0.12|ENSG00000171634|chr17:67948150-67948150|A/-|frameshift_variant;ENSG00000171634|ENST00000306378|BPTF;ENST00000582406.1_1_17:65940388-65941531:+|nuORF;ENST00000584931.1_1_17:65936727-65940601:+|nuORF;nc|ENSG00000171634|Q12830-4|BPTF;nc|ENSG00000171634|Q12830|BPTF	47.95952297671804	0.32689736945648856	1				NaN	NaN	0	NaN	4960	4085	9043
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9057	28.872	NaN	5571.6	30	0	804.29	0.214	+			41373	SVMGVTVSR	9	55	468.2522613957356	934.4899698582713	2	468.25244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVMGVTVSR_	DIP2B|p.A1021Cfs*11|1|0.32|ENSG00000066084|chr12:50721279-50721280|-/CTGTATGCAC|frameshift_variant;DIP2B|p.I979Afs*17|1|0.13|ENSG00000066084|chr12:50718790-50718815|AAATAGAAGAGAATGATTTGGTGAGG/-|frameshift_variant;DIP2B|p.V1240Dfs*9|1|0.05|ENSG00000066084|chr12:50731445-50731446|-/ATATTTAC|frameshift_variant;DIP2B|p.V893Gfs*91|1|0.06|ENSG00000066084|chr12:50714417-50714418|-/G|frameshift_variant;ENSG00000066084|ENST00000301180|DIP2B	114.8945686534367	0.024290463251177924	1				NaN	NaN	0	NaN	4967	4088	9056
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9058	28.875	NaN	2591.6	30	0	615.63	0.033			+	10109	ESLQPGGLP	9	48	449.238216937208	896.461880941216	2	449.23895263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ESLQPGGLP_	REV__ARFGAP1|p.S295Ffs*42|1|0.48|ENSG00000101199|chr20:63286407-63286408|-/T|frameshift_variant;REV__ENST00000519604.5_1_20:61917740-61919008:+|nuORF	38.80614096846853	0.43426287593479557	1				NaN	NaN	0	NaN	4968	4088	9056
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9069	28.901	NaN	8121.9	30	0	2947.2	0.214	+			46385	VELGTQPAT	9	59	458.2424229339257	914.4702929346514	2	458.2425231933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VELGTQPAT_	ENSG00000158874|ENST00000367990|APOA2	131.03138772384656	0.014687601201650916	1				NaN	NaN	0	NaN	4976	4091	9068
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9070	28.904	NaN	2858.1	30	0	249.1	0.106				-1	TAAECRKL	8	59	474.7483827177212	947.4822125022424	2	474.7487487792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_TAAEC(Carbamidomethyl (C))RKL_	ENSG00000170509|ENST00000328546|HSD17B13	42.396135135203025	0.6414440140393314	1				NaN	NaN	0	NaN	4977	4091	9068
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9071	28.906	NaN	2170.3	30	0	972.12	0.106	+			12354	GDPAPGVQGY	10	55	480.7244613616665	959.434369790133	2	480.72442626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GDPAPGVQGY_	ENSG00000167791|ENST00000294288|CABP2	32.81241826257853	0.6118718159329168	1				NaN	NaN	0	NaN	4978	4091	9068
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9072	28.908	NaN	2623.9	30	0	245.69	0.036			+	33444	RILIPLDPN	9	69	525.8184723137085	1049.622391694217	2	525.8192749023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RILIPLDPN_	REV__ENSG00000131495|ENST00000252102|NDUFA2;REV__nc|ENSG00000131495|O43678-2|NDUFA2	46.45678178249821	0.34452392205506005	1				NaN	NaN	0	NaN	4979	4091	9068
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9083	28.933	NaN	43795	30	0	13768	0.214	+			12815	GEMVARGSN	9	72	468.7139180046712	935.4132830761424	2	468.7140197753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_GEM(Oxidation (M))VARGSN_	ENSG00000137674|ENST00000260228|MMP20	56.72105179125745	0.24094814563026265	1				NaN	NaN	0	NaN	4987	4094	9082
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9084	28.937	NaN	5410.6	30	0	1244.8	0.106	+			44816	TTSNFTFSK	9	65	516.7531092505994	1031.4916655679988	2	516.7539672851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTSNFTFSK_	ENSG00000160294|ENST00000291688|MCM3AP;MCM3AP|p.K492Efs*5|1|0.29|ENSG00000160294|chr21:46280545-46280546|-/C|frameshift_variant	98.58198989935565	0.04066992115528678	1				NaN	NaN	0	NaN	4988	4094	9082
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9085	28.939	NaN	3074.4	30	0	1341.8	0.106	+			30904	QEKVSDYEM	9	59	564.7471527425919	1127.4797525519837	2	564.7484130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QEKVSDYEM_	ENSG00000132646|ENST00000379143|PCNA	82.24051045832904	0.08786059719216216	1				NaN	NaN	0	NaN	4989	4094	9082
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9086	28.94	NaN	1981.6	30	0	374.68	0.106	+			29228	NVYEVVNPK	9	59	531.2849846587486	1060.5554163842971	2	531.2861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NVYEVVNPK_	ENSG00000139117|ENST00000331366|CPNE8	75.04331003522576	0.118981335847003	1				NaN	NaN	0	NaN	4990	4094	9082
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9087	28.942	NaN	1368.6	30	0	87.334	0.106			+	31045	QEVTLYLTT	9	58	534.2861464798341	1066.557740026468	2	534.2872314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QEVTLYLTT_	REV__ENST00000430584.1_2_7:77044973-77045093:-|nuORF	30.317721548370564	0.5199124245378496	1				NaN	NaN	0	NaN	4991	4094	9082
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9088	28.944	NaN	2599.7	30	0	706.76	0.039	+			26099	LSNKDCFNLIA	11	54	413.2120361328125	NaN	0	413.2120361328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSNKDCFNLIA_	ENSG00000175267|ENST00000389398|VWA3A;nc|ENSG00000175267|A6NCI4-2|VWA3A;VWA3A|p.K873Nfs*2|1|0.11|ENSG00000175267|chr16:22144268-22144268|A/-|frameshift_variant	37.50817390946774	0.39825797133360086	1				NaN	NaN	0	NaN	4992	4094	9082
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9100	28.97	NaN	2486.2	30	0	407.52	0.214	+			23114	KVVNPLFEK	9	61	537.3211001536579	1072.6276473741157	2	537.3214111328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVVNPLFEK_	ENSG00000148303|ENST00000323345|RPL7A;ENST00000416120.1_1_6:64259201-64259360:-|nuORF;ENST00000424041.1_1_20:36073469-36073910:-|nuORF;ENST00000434317.1_1_7:102395625-102396051:+|nuORF;ENST00000463740.5_1_9:136215098-136217195:+|nuORF;ENST00000468834.1_1_10:33346560-33347304:-|nuORF;ENST00000486157.1_1_5:78825151-78825526:+|nuORF	104.42354056486148	0.0346881550498418	1				NaN	NaN	0	NaN	5001	4097	9099
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9101	28.973	NaN	1628.7	30	0	207.37	0.032	+			8336	EAKSAVLP	8	49	407.7367787641337	813.4590045950674	2	407.7370300292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EAKSAVLP_	ADGRV1|p.F5465Lfs*13|1|0.26|ENSG00000164199|chr5:90828964-90828964|T/-|frameshift_variant;ADGRV1|p.T5738Pfs*48|1|0.19|ENSG00000164199|chr5:90853288-90853288|A/-|frameshift_variant;ADGRV1|p.Y5091Tfs*7|2|0.25|ENSG00000164199|chr5:90810525-90810525|T/-|frameshift_variant;ENSG00000164199|ENST00000405460|ADGRV1;nc|ENSG00000164199|Q8WXG9-2|ADGRV1	53.351449002276354	0.5676011784961348	1				NaN	NaN	0	NaN	5002	4097	9099
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9110	28.995	NaN	1959.1	30	0	329.29	0.214			+	-1	VMSFCLIIN	9	59	548.7789462503002	1095.5433395674004	2	548.7810668945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_VMSFC(Carbamidomethyl (C))LIIN_	REV__ENSG00000162753|ENST00000367714|SLC9C2;REV__SLC9C2|p.K843Nfs*2|1|0.57|ENSG00000162753|chr1:173524080-173524080|T/-|frameshift_variant	45.9519527083369	0.35044536499095585	1				NaN	NaN	0	NaN	5008	4100	9109
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9111	28.998	NaN	1008.7	30	0	183.11	0.106	+			17609	IEGVTHAL	8	35	420.2347018283422	NaN	0	420.2342529296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IEGVTHAL_	ENSG00000136628|ENST00000366923|EPRS1	33.51558372728122	1.7418937515398478	1				NaN	NaN	0	NaN	5009	4100	9109
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9112	29	NaN	1039.5	30	0	94.422	0.035	+			47171	VLSTVFNSL	9	55	490.27630803692034	NaN	0	490.2770690917969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VLSTVFNSL_	ENSG00000273238|ENST00000610212|TMEM271	37.81151784470057	0.28666463014928195	1				NaN	NaN	0	NaN	5010	4100	9109
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9118	29.016	NaN	5149.5	30	0	566.46	0.214				-1	 	0	69	478.76134026774815	955.5081276022963	2	478.7614440917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	5013	4103	9117
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9119	29.02	NaN	1693.8	30	0	104.37	0.034	+			28576	NKIKEMPA	8	47	465.75707476717906	929.4995966011581	2	466.25775146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NKIKEMPA_	ENSG00000138771|ENST00000296043|SHROOM3	30.503639358989545	0.7238069182250283	1				NaN	NaN	0	NaN	5014	4103	9117
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9125	29.036	NaN	2461.4	30	0	245.28	0.214	+			20436	KEVAELTRL	9	59	529.8136253836731	1057.612697834146	2	529.8140869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEVAELTRL_	ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1	54.722347961057174	0.257609425301511	1				NaN	NaN	0	NaN	5017	4106	9124
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9126	29.04	NaN	1674	30	0	129.56	0.035			+	49129	VVLVHGVAAAG	11	62	496.7977853148446	NaN	0	496.7981872558594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVLVHGVAAAG_	REV__nc|ENSG00000176973|Q8N5H3-4|FAM89B	31.954861631926434	0.423006731851301	1				NaN	NaN	0	NaN	5018	4106	9124
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9133	29.058	NaN	29218	30	0	13378	0.214	+			18525	ISLCHSSNDK	10	68	387.5169781756217	1159.5291051270651	3	387.5171203613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_ISLC(Carbamidomethyl (C))HSSNDK_	ENSG00000042429|ENST00000251871|MED17	40.05817265558897	0.5486090488315611	1				NaN	NaN	0	NaN	5022	4109	9132
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9134	29.061	NaN	4398	30	0	395.06	0.106	+			36178	SELITKAV	8	52	430.7577060978566	859.5008592625132	2	430.7580871582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SELITKAV_	ENSG00000124575|ENST00000244534|H1-3;ENSG00000168298|ENST00000304218|H1-4;ENSG00000184357|ENST00000331442|H1-5;ENSG00000187837|ENST00000343677|H1-2	69.6276240434122	0.4100012001731381	1				NaN	NaN	0	NaN	5023	4109	9132
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9135	29.063	NaN	646.25	30	0	404.01	0.03				-1	 	0	21	329.21961738700304	656.4246818408061	2	329.2196044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	5024	4109	9132
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9145	29.087	NaN	6499.6	30	0	1873.7	0.214	+			3305	ASLTAALAK	9	61	423.2579205558625	844.501288178525	2	423.258056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASLTAALAK_	ENSG00000197892|ENST00000524189|KIF13B;nc|ENSG00000197892|Q9NQT8-2|KIF13B	109.47833844074708	0.029530294723441826	1				NaN	NaN	0	NaN	5031	4112	9144
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9146	29.09	NaN	2531.4	30	0	401.43	0.106	+			7176	DAGPPTHAF	9	52	456.71394471872895	911.4133365042579	2	456.7135925292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DAGPPTHAF_	ENSG00000139946|ENST00000267460|PELI2;ENSG00000197329|ENST00000358912|PELI1	63.30626980617807	0.18605348971131092	1				NaN	NaN	0	NaN	5032	4112	9144
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9147	29.092	NaN	1424.5	30	0	110.22	0.034	+			2231	ALSLPAATSL	10	52	472.27609394827823	942.5376349633565	2	472.2762756347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ALSLPAATSL_	ENST00000397354.7_1_X:39933702-39933888:-|nuORF	42.396135135203025	0.5270658956260207	1				NaN	NaN	0	NaN	5033	4112	9144
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9154	29.11	NaN	11941	30	0	2530.7	0.214	+			39894	STLSTVISK	9	73	468.27371602318595	934.5328791131719	2	468.2737731933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STLSTVISK_	ENSG00000174197|ENST00000703841|MGA;MGA|p.D2578Rfs*45|1|0.32|ENSG00000174197|chr15:41762342-41762343|-/A|frameshift_variant;MGA|p.S2228Kfs*5|1|0.33|ENSG00000174197|chr15:41750284-41750285|-/A|frameshift_variant;MGA|p.T1916Qfs*7|1|0.4|ENSG00000174197|chr15:41749350-41749350|A/-|frameshift_variant	90.60085204095205	0.06317133949006545	1				NaN	NaN	0	NaN	5037	4115	9153
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9155	29.114	NaN	7127.4	30	0	1265.4	0.106	+			7127	DAARLQAAY	9	67	489.7535114447654	977.4924699563309	2	489.753662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DAARLQAAY_	ENSG00000115306|ENST00000356805|SPTBN1;ENST00000496323.1_1_2:54880712-54887220:+|nuORF;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1	72.87924865735499	0.12833875048249987	1				NaN	NaN	0	NaN	5038	4115	9153
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9156	29.116	NaN	4475.8	30	0	1989.1	0.106	+			32397	QVDPNFYSK	9	72	549.2664650621723	1096.5183771911445	2	549.2677612304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QVDPNFYSK_	ENSG00000176623|ENST00000406452|RMDN1;nc|ENSG00000176623|Q96DB5-2|RMDN1	56.43379154798735	0.2433427591689151	1				NaN	NaN	0	NaN	5039	4115	9153
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9157	29.118	NaN	2497.2	30	0	419.55	0.106	+			47902	VSLLSHRW	8	64	499.2817640826558	996.5489752321116	2	499.2817077636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSLLSHRW_	ENSG00000007038|ENST00000005995|PRSS21;ENST00000577043.1_1_16:2867692-2871170:+|nuORF;nc|ENSG00000007038|Q9Y6M0-2|PRSS21;nc|ENSG00000007038|Q9Y6M0-3|PRSS21	37.81151784470057	0.6698925118251505	1				NaN	NaN	0	NaN	5040	4115	9153
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9158	29.119	NaN	1134	30	0	112.15	0.106	+			8424	EAQQAPLNY	9	54	517.2531127929688	NaN	0	517.2531127929688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EAQQAPLNY_	ENST00000366997.8_1_1:211921045-211921129:-|nuORF	26.69291269510374	0.34280015626154364	1				NaN	NaN	0	NaN	5041	4115	9153
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9159	29.121	NaN	991.71	30	0	107.21	0.033			+	-1	MHSSPLPN	8	46	449.7064223055739	897.3982916779478	2	449.7066650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_M(Oxidation (M))HSSPLPN_	REV__ENSG00000043462|ENST00000046794|LCP2;REV__LCP2|p.T454Nfs*15|1|0.35|ENSG00000043462|chr5:170250848-170250849|-/T|frameshift_variant	40.5726180659479	0.6527593143185008	1				NaN	NaN	0	NaN	5042	4115	9153
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9170	29.146	NaN	3232.6	30	0	707.63	0.214	+			15443	GTYVGLTCK	9	52	471.2413028034291	940.4680526736582	2	471.2408142089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTYVGLTCK_	ENSG00000221926|ENST00000649191|TRIM16;nc|ENSG00000221926|O95361-2|TRIM16;nc|ENSG00000291110|Q309B1|TRIM16L	82.7504851949679	0.08565546331141553	1				NaN	NaN	0	NaN	5050	4118	9169
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9171	29.15	NaN	1135	30	0	180.08	0.106			+	41896	SVTTSLAVK	9	47	453.26856277628895	904.5225726193779	2	453.7552490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVTTSLAVK_	REV__CASP8AP2|p.D1810Mfs*3|1|0.43|ENSG00000118412|chr6:89868711-89868711|A/-|frameshift_variant;REV__CASP8AP2|p.E1628Mfs*58|1|0.49|ENSG00000118412|chr6:89868163-89868164|-/AT|frameshift_variant;REV__CASP8AP2|p.N1236Ifs*9|1|0.3|ENSG00000118412|chr6:89866990-89866990|A/-|frameshift_variant;REV__CASP8AP2|p.N1917Kfs*4|1|0.24|ENSG00000118412|chr6:89869034-89869035|-/A|frameshift_variant;REV__ENSG00000118412|ENST00000551025|CASP8AP2;REV__ENST00000237177.10_1_6:90556308-90583533:+|nuORF;REV__nc|ENSG00000118412|Q9UKL3|CASP8AP2	21.9598887501803	0.5980208138527809	1				NaN	NaN	0	NaN	5051	4118	9169
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9172	29.152	NaN	1437.7	30	0	571.61	0.106	+			2413	APAPPTPAPTA	11	43	495.7662498242855	NaN	0	495.7665100097656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_APAPPTPAPTA_	ENSG00000135631|ENST00000486777|RAB11FIP5	25.57405402267927	0.45144328854727944	1				NaN	NaN	0	NaN	5052	4118	9169
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9173	29.154	NaN	4919.3	30	0	1881.6	0.106			+	17314	IAERQTAL	8	51	451.2583843434857	900.5022157537715	2	451.2582092285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IAERQTAL_	REV__CEP295|p.F1469Yfs*47|1|0.31|ENSG00000166004|chr11:93699317-93699318|-/ATCCAGCC|frameshift_variant;REV__CEP295|p.L2479Ffs*6|1|0.29|ENSG00000166004|chr11:93729651-93729651|A/-|frameshift_variant;REV__ENSG00000166004|ENST00000325212|CEP295;REV__nc|ENSG00000166004|Q9C0D2-3|CEP295	73.97473282117947	0.3737790450121076	1				NaN	NaN	0	NaN	5053	4118	9169
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9174	29.155	NaN	1165.8	30	0	56.023	0.036	+			38139	SQADMQSRK	9	59	525.7546105464776	1049.494668159755	2	525.7555541992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SQADMQSRK_	ENSG00000142609|ENST00000682832|CFAP74;ENST00000270720.11_1_1:1887019-1905630:-|nuORF;nc|ENSG00000142609|Q9C0B2-2|CFAP74;nc|ENSG00000142609|Q9C0B2|CFAP74	31.529811441608018	0.5085848003137583	1				NaN	NaN	0	NaN	5054	4118	9169
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9183	29.177	NaN	1652	30	0	419.31	0.214	+			49896	VYTTMAEHF	9	56	557.7468365661821	1113.479120199164	2	557.74755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_VYTTM(Oxidation (M))AEHF_	ENSG00000117472|ENST00000372003|TSPAN1;TSPAN1|p.T119M|1|0.33|ENSG00000117472|chr1:46184801-46184801|C/T|missense_variant	60.97194046774394	0.20551255781574032	1				NaN	NaN	0	NaN	5060	4121	9182
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9184	29.181	NaN	2343.4	30	0	425.16	0.106	+			5976	AVLPTPVTK	9	49	463.28905607744036	924.5635592216807	2	463.28900146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVLPTPVTK_	ENSG00000197724|ENST00000359246|PHF2;PHF2|p.S954Efs*9|1|0.47|ENSG00000197724|chr9:93676611-93676612|-/A|frameshift_variant	35.61828744233558	0.47037581924408073	1				NaN	NaN	0	NaN	5061	4121	9182
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9185	29.183	NaN	1891.2	30	0	157.68	0.106			+	27371	MKDKGENII	9	53	524.2784732816972	1046.5423936301943	2	524.2794799804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MKDKGENII_	REV__ENSG00000103534|ENST00000542583|TMC5;REV__nc|ENSG00000103534|Q6UXY8-2|TMC5;REV__nc|ENSG00000103534|Q6UXY8-3|TMC5;REV__nc|ENSG00000103534|Q6UXY8-4|TMC5	40.77816245573522	0.41113185337114944	1				NaN	NaN	0	NaN	5062	4121	9182
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9186	29.184	NaN	1683.9	30	0	260.77	0.106	+			47724	VSGAVVAAVI	10	52	443.27359764735047	884.532642361501	2	443.27362060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSGAVVAAVI_	ENSG00000204592|ENST00000376630|HLA-E	66.42927471994793	0.3073667423445326	1				NaN	NaN	0	NaN	5063	4121	9182
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9187	29.186	NaN	1326.1	30	0	336.29	0.106	+			28468	NFVENLATAAQ	11	44	589.2971165056904	1176.5796800781807	2	589.2979736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NFVENLATAAQ_	ENST00000561199.5_1_14:24652794-24657993:-|nuORF	36.31764250033197	0.6083289427130232	1				NaN	NaN	0	NaN	5064	4121	9182
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9188	29.188	NaN	1273.4	30	0	178.28	0.033			+	-1	ARLSLIAM	8	49	445.75827714310884	NaN	0	445.7574462890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_ARLSLIAM(Oxidation (M))_	REV__ENST00000563594.5_1_16:90015852-90020668:+|nuORF;REV__ENST00000567874.5_1_16:90015852-90021630:+|nuORF;REV__ENST00000567884.5_2_16:90015852-90019061:+|nuORF;REV__ENST00000569061.5_2_16:90015852-90018978:+|nuORF	33.51558372728122	1.7418937515398478	1				NaN	NaN	0	NaN	5065	4121	9182
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9197	29.208	NaN	37371	30	0	13216	0.214	+			40666	SVASISLTK	9	64	453.26856277628895	904.5225726193779	2	453.26849365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVASISLTK_	ENST00000298289.6_1_14:50085755-50087389:-|nuORF	123.20810148215591	0.019257656778428764	1				NaN	NaN	0	NaN	5071	4124	9196
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9198	29.212	NaN	2998.2	30	0	440.5	0.106			+	10436	EVLAAGKVA	9	49	429.2579610582507	856.5013691833014	2	429.2577209472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EVLAAGKVA_	REV__ENSG00000087074|ENST00000200453|PPP1R15A	68.78682469695295	0.14603441672067394	1				NaN	NaN	0	NaN	5072	4124	9196
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9199	29.213	NaN	1532.7	30	0	160.16	0.035			+	9183	EGQILRLLA	9	47	506.81073319981783	1011.6069134664357	2	506.81182861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EGQILRLLA_	REV__ENSG00000056487|ENST00000313237|PHF21B;REV__nc|ENSG00000056487|Q96EK2-3|PHF21B;REV__nc|ENSG00000056487|Q96EK2-4|PHF21B	46.45678178249821	0.34452392205506005	1				NaN	NaN	0	NaN	5073	4124	9196
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9205	29.23	NaN	2321.3	30	0	944.03	0.143	+			16500	HETTFNSI	8	43	474.72439149884764	947.4342300644953	2	474.7248229980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HETTFNSI_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196604|ENST00000409914|POTEF;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000418351.1_1_15:44281261-44281585:-|nuORF;ENST00000437653.1_1_3:175695464-175695797:-|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000486001.1_1_1:27651822-27652284:+|nuORF;ENST00000493945.5_1_7:5567381-5567853:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF	58.78195531508484	0.5138399468736706	1				NaN	NaN	0	NaN	5076	4127	9204
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9216	29.257	NaN	2818.8	30	0	634.69	0.214	+			19358	KALDFIASK	9	61	496.79227287829985	991.5699928233997	2	496.7923278808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KALDFIASK_	ACTN1|p.N119Efs*3|1|0.38|ENSG00000072110|chr14:68912228-68912229|-/TC|frameshift_variant;ENSG00000072110|ENST00000394419|ACTN1;ENSG00000130402|ENST00000252699|ACTN4;ENSG00000248746|ENST00000513398|ACTN3;ENST00000502692.5_1_11:66313918-66328094:+|nuORF;ENST00000513398.1_1_11:66314411-66328094:+|nuORF;ENST00000588618.5_1_19:39138385-39212431:+|nuORF;nc|ENSG00000072110|P12814-2|ACTN1;nc|ENSG00000072110|P12814-4|ACTN1;nc|ENSG00000072110|P12814|ACTN1	79.48907831485694	0.09975780661107167	1				NaN	NaN	0	NaN	5084	4130	9215
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9217	29.26	NaN	2172.7	30	0	799.42	0.106			+	36691	SGPTKAPVGP	10	51	455.7528965139293	909.4912400946586	2	455.753173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SGPTKAPVGP_	REV__nc|ENSG00000168229|Q13258-2|PTGDR	54.776311868738084	0.41334902933431344	1				NaN	NaN	0	NaN	5085	4130	9215
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9218	29.262	NaN	1439.1	30	0	631.18	0.106	+			26083	LSMKIVKPN	9	29	343.87469482421875	NaN	0	343.87469482421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSMKIVKPN_	ENSG00000138119|ENST00000359263|MYOF;nc|ENSG00000138119|Q9NZM1-2|MYOF;nc|ENSG00000138119|Q9NZM1-3|MYOF;nc|ENSG00000138119|Q9NZM1-5|MYOF;nc|ENSG00000138119|Q9NZM1-6|MYOF	21.9598887501803	0.3626577482100488	1				NaN	NaN	0	NaN	5086	4130	9215
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9219	29.264	NaN	2066.2	30	0	180.66	0.034	+			49513	VWQESGVY	8	54	484.2311178936065	966.447682854013	2	484.2309265136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VWQESGVY_	ENSG00000142207|ENST00000382751|URB1	42.47446043378293	0.6409579893742323	1				NaN	NaN	0	NaN	5087	4130	9215
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9228	29.284	NaN	3597.8	30	0	824.48	0.214			+	-1	EMGQATQR	8	60	468.7139180046712	935.4132830761424	2	468.7137756347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_EM(Oxidation (M))GQATQR_	REV__ENST00000460610.1_1_3:12632295-12641253:-|nuORF;REV__ENST00000494557.1_1_3:12632295-12633310:-|nuORF	34.172542307311794	0.6954784234644539	1				NaN	NaN	0	NaN	5093	4133	9227
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9229	29.288	NaN	1219.2	30	0	87.189	0.033	+			23998	LEAGLLGLS	9	55	436.75822985444546	871.5019067756909	2	436.75836181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LEAGLLGLS_	ENST00000497882.5_1_2:220079653-220079878:-|nuORF	96.19043198914106	0.047412499214244314	1				NaN	NaN	0	NaN	5094	4133	9227
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9237	29.308	NaN	1328.3	30	0	209.37	0.214			+	-1	VVDVVCSAQ	9	50	488.74022184853084	975.4658907638617	2	488.7398986816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_VVDVVC(Carbamidomethyl (C))SAQ_	REV__ANKRD24|p.S274Ifs*10|1|0.42|ENSG00000089847|chr19:4207955-4207956|-/A|frameshift_variant;REV__ENSG00000089847|ENST00000318934|ANKRD24;REV__nc|ENSG00000089847|Q8TF21-2|ANKRD24	34.172542307311794	0.4838870758800184	1				NaN	NaN	0	NaN	5099	4136	9236
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9238	29.311	NaN	1824	30	0	195.81	0.035			+	25378	LPHPWRNE	8	59	524.7697794435712	1047.5250059539424	2	524.7706298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LPHPWRNE_	REV__ENST00000346693.8_1_X:149935499-149935694:-|nuORF	52.29916861842294	0.578018602984656	1				NaN	NaN	0	NaN	5100	4136	9236
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9245	29.329	NaN	1622.1	30	0	286.86	0.215	+			14918	GTMAMTVVTK	10	56	519.7699622578949	NaN	0	519.7698364257812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTMAMTVVTK_	ENSG00000175115|ENST00000320580|PACS1;nc|ENSG00000175115|Q6VY07-2|PACS1	76.16968421966216	0.118310876128328	1				NaN	NaN	0	NaN	5104	4139	9244
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9246	29.333	NaN	1763	30	0	122.15	0.106	+			37951	SPFATTTKY	9	58	508.2580482878957	1014.5015436425914	2	508.2584533691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SPFATTTKY_	ENSG00000130147|ENST00000392011|SH3BP4	60.11826168202944	0.21262886028301267	1				NaN	NaN	0	NaN	5105	4139	9244
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9247	29.335	NaN	1170.5	30	0	82.127	0.034			+	13460	GLKAYTGEK	9	46	483.766080805446	965.517608677692	2	483.7656555175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GLKAYTGEK_	REV__ENSG00000275342|ENST00000615670|PRAG1	37.81151784470057	0.4459294069877048	1				NaN	NaN	0	NaN	5106	4139	9244
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9253	29.351	NaN	4490.1	30	0	1865.4	0.214	+			38577	SSFSGLLRK	9	28	332.19400854633926	993.5601962392178	3	332.1941223144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSFSGLLRK_	ENSG00000162783|ENST00000367577|IER5	21.9598887501803	0.5980208138527809	1				NaN	NaN	0	NaN	5109	4142	9252
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9254	29.354	NaN	1152.6	30	0	142.16	0.106	+			38030	SPPAETHVF	9	52	492.743070906057	983.4715888789141	2	492.7434997558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SPPAETHVF_	COL12A1|p.F2273Lfs*20|1|0.26|ENSG00000111799|chr6:75124000-75124000|A/-|frameshift_variant;COL12A1|p.G2777Wfs*37|1|0.15|ENSG00000111799|chr6:75102684-75102685|-/G|frameshift_variant;COL12A1|p.G3027Wfs*19|1|0.1|ENSG00000111799|chr6:75087680-75087681|-/G|frameshift_variant;COL12A1|p.L2085Hfs*4|1|0.22|ENSG00000111799|chr6:75128382-75128383|-/T|frameshift_variant;COL12A1|p.P2307Lfs*21|1|0.25|ENSG00000111799|chr6:75123356-75123356|G/-|frameshift_variant;COL12A1|p.T1046Qfs*7|2|0.22|ENSG00000111799|chr6:75156372-75156372|G/-|frameshift_variant;ENSG00000111799|ENST00000322507|COL12A1;nc|ENSG00000111799|Q99715-4|COL12A1	42.396135135203025	0.392153681582562	1				NaN	NaN	0	NaN	5110	4142	9252
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9255	29.356	NaN	895.21	30	0	307.89	0.106				-1	QTSVMYKE	8	45	501.23363463985663	1000.4527163465133	2	501.2333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_QTSVM(Oxidation (M))YKE_	ENSG00000165071|ENST00000677595|TMEM71;nc|ENSG00000165071|Q6P5X7-2|TMEM71;nc|ENSG00000165071|Q6P5X7-3|TMEM71	24.20275056022122	0.7724576178584145	1				NaN	NaN	0	NaN	5111	4142	9252
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9256	29.358	NaN	1618.6	30	0	100.54	0.035			+	25424	LPLVRCGHP	9	66	524.7884300411082	NaN	0	524.7883911132812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_LPLVRC(Carbamidomethyl (C))GHP_	REV__ENST00000403952.3_2_7:808720-814797:+|nuORF	47.91560031466742	0.22105767942158736	1				NaN	NaN	0	NaN	5112	4142	9252
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9262	29.374	NaN	3066	30	0	397.87	0.214	+			37089	SISISVARG	9	54	445.25854101777117	888.5025291023424	2	445.2586975097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SISISVARG_	CON__P04264;ENSG00000167768|ENST00000252244|KRT1	60.11826168202944	0.21262886028301267	1				NaN	NaN	0	NaN	5115	4145	9261
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9263	29.378	NaN	1735.1	30	0	375.98	0.106			+	46067	VCLCVIPK	8	47	466.2578189219742	930.5010849107484	2	466.2586669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_VCLC(Carbamidomethyl (C))VIPK_	REV__ENST00000262888.7_1_19:44285036-44285354:-|nuORF	54.76467175910256	0.5536104764165384	1				NaN	NaN	0	NaN	5116	4145	9261
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9264	29.38	NaN	860.03	30	0	500.12	0.106			+	34766	RYGRKIAN	8	17	326.5250320492287	NaN	0	326.1904296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RYGRKIAN_	REV__ENSG00000113721|ENST00000261799|PDGFRB;REV__ENST00000520579.5_1_5:149495328-149514444:-|nuORF;REV__PDGFRB|p.S1043Afs*2|1|0.11|ENSG00000113721|chr5:150117629-150117629|G/-|frameshift_variant	13.775330524044264	1.7418937515398478	1				NaN	NaN	0	NaN	5117	4145	9261
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9265	29.382	NaN	1181.7	30	0	103.57	0.106			+	21311	KLSVEQAFI	9	47	517.7988663294343	1033.5831797256685	2	517.7998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KLSVEQAFI_	REV__ENSG00000182836|ENST00000377801|PLCXD3	37.81151784470057	0.4459294069877048	1				NaN	NaN	0	NaN	5118	4145	9261
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9266	29.383	NaN	788.11	30	0	117.16	0.036	+			28755	NPASGEKFAY	10	53	542.2586690961288	1082.5027852590574	2	542.2598266601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NPASGEKFAY_	ENSG00000001630|ENST00000003100|CYP51A1;ENST00000419457.1_1_13:29296686-29297403:-|nuORF;nc|ENSG00000001630|Q16850-2|CYP51A1	53.08895987439943	0.42869529153390606	1				NaN	NaN	0	NaN	5119	4145	9261
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9278	29.409	NaN	7232	30	0	1868.8	0.214	+			29081	NTMNITISK	9	62	511.2705653312665	1020.526577729333	2	511.2710876464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NTMNITISK_	ENSG00000129003|ENST00000644861|VPS13C;nc|ENSG00000129003|Q709C8-2|VPS13C;nc|ENSG00000129003|Q709C8-3|VPS13C;nc|ENSG00000129003|Q709C8-4|VPS13C;VPS13C|p.E2463Nfs*18|1|0.25|ENSG00000129003|chr15:61920157-61920157|C/-|frameshift_variant;VPS13C|p.N3163Sfs*6|1|0.05|ENSG00000129003|chr15:61882732-61882733|-/TTATCATCAC|frameshift_variant;VPS13C|p.P3597Lfs*3|1|0.26|ENSG00000129003|chr15:61868732-61868732|G/-|frameshift_variant	136.98908636845044	0.011892605960677736	1				NaN	NaN	0	NaN	5128	4148	9277
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9279	29.413	NaN	1223	30	0	102.5	0.106	+			472	AAVSTHVAL	9	50	434.748057149926	NaN	0	434.7481689453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAVSTHVAL_	ENSG00000163501|ENST00000295731|IHH;IHH|p.E379Rfs*18|2|0.25|ENSG00000163501|chr2:219055308-219055308|C/-|frameshift_variant;IHH|p.Q386Sfs*11|1|0.4|ENSG00000163501|chr2:219055287-219055287|G/-|frameshift_variant	55.50420428727701	0.16876052142120426	1				NaN	NaN	0	NaN	5129	4148	9277
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9280	29.415	NaN	975.6	30	0	155.52	0.106			+	-1	VPCPPLHW	8	49	503.25311279296875	NaN	0	503.25311279296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_VPC(Carbamidomethyl (C))PPLHW_	REV__ENST00000527357.5_1_11:799959-801918:-|nuORF	24.504012794735996	1.7418937515398478	1				NaN	NaN	0	NaN	5130	4148	9277
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9281	29.416	NaN	1469.7	30	0	103.09	0.033	+			45865	VAMAAARAL	9	52	437.2523195533205	NaN	0	437.2527160644531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VAMAAARAL_	ENSG00000196943|ENST00000267425|NOP9;nc|ENSG00000196943|Q86U38-2|NOP9	45.9519527083369	0.2345902329052062	1				NaN	NaN	0	NaN	5131	4148	9277
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9292	29.442	NaN	1874.5	30	0	262.31	0.214	+			38839	SSNLFVTGK	9	50	476.75885807089855	951.5031632085971	2	476.7583923339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSNLFVTGK_	ENST00000451596.2_1_9:74929993-74930062:+|nuORF	109.43880257439609	0.029570636687953285	1				NaN	NaN	0	NaN	5139	4151	9291
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9293	29.445	NaN	5876.7	30	0	1147.4	0.106	+			4948	ATQSFSTFR	9	60	522.758667093898	1043.502781254596	2	522.7589721679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATQSFSTFR_	ENSG00000044090|ENST00000265348|CUL7;nc|ENSG00000044090|Q14999-2|CUL7	86.88156770896713	0.07365720931774442	1				NaN	NaN	0	NaN	5140	4151	9291
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9294	29.447	NaN	19777	30	0	8295	0.106	+			14841	GTLMWHQMK	9	48	377.8522396743484	1130.5348896232454	3	377.8525085449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTLMWHQMK_	ENST00000346169.6_1_3:184032401-184033585:+|nuORF;ENST00000352767.7_2_3:184032446-184033585:+|nuORF	31.954861631926434	0.5046124803899898	1				NaN	NaN	0	NaN	5141	4151	9291
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9295	29.449	NaN	1502.5	30	0	119.89	0.106	+			49034	VVHGLFDSSY	10	54	562.2749839653557	NaN	0	562.2750244140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVHGLFDSSY_	ENSG00000221988|ENST00000324816|PPT2;ENST00000493548.5_1_6:32122153-32123690:+|nuORF;nc|ENSG00000258388|Q9UMR5-2|PPT2;nc|ENSG00000258388|Q9UMR5-3|PPT2	31.954861631926434	0.3952518850925832	1				NaN	NaN	0	NaN	5142	4151	9291
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9296	29.451	NaN	1802.5	30	0	522.89	0.106			+	-1	EPLYLYMCL	9	41	387.5169781756217	1159.5291051270651	3	387.5168762207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_EPLYLYM(Oxidation (M))CL_	REV__ENST00000341618.8_2_21:30547632-30547791:+|nuORF	20.94693142431847	0.6074874384046576	1				NaN	NaN	0	NaN	5143	4151	9291
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9297	29.452	NaN	1504.4	30	0	311.53	0.038			+	51085	YLQRVGAQTF	10	41	394.8801739659105	1181.6186924979315	3	394.88018798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YLQRVGAQTF_	REV__ENSG00000162695|ENST00000357650|SLC30A7	35.15202426646627	0.5927656479315102	1				NaN	NaN	0	NaN	5144	4151	9291
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9298	29.453	NaN	1437.9	30	0	547.54	0.14				-1	EAWKAMKE	8	52	504.7463059368255	NaN	0	504.74664306640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_EAWKAM(Oxidation (M))KE_	ENSG00000164114|ENST00000311277|MAP9;MAP9|p.D594Rfs*2|1|0.11|ENSG00000164114|chr4:155352637-155352638|-/T|frameshift_variant;MAP9|p.K567Rfs*13|5|0.22|ENSG00000164114|chr4:155352717-155352717|T/-|frameshift_variant;MAP9|p.S472A|1|0.16|ENSG00000164114|chr4:155353307-155353307|A/C|missense_variant	34.172542307311794	1.7418937515398478	1				NaN	NaN	0	NaN	5145	4151	9291
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9309	29.48	NaN	5175	30	0	528.68	0.214	+			46199	VEAEGIRPGP	10	66	512.7743069533484	1023.5340609734968	2	512.77490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VEAEGIRPGP_	ENST00000361545.9_1_7:73818191-73818509:+|nuORF	53.08895987439943	0.42869529153390606	1				NaN	NaN	0	NaN	5153	4154	9308
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9310	29.484	NaN	3004.4	30	0	627.48	0.106	+			19136	IYNGKVTSI	9	61	497.7819873153856	993.5494216975712	2	497.78192138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IYNGKVTSI_	ENSG00000067596|ENST00000262415|DHX8;ENST00000587044.1_1_17:41568567-41594747:+|nuORF	104.0567914643314	0.03506238181059741	1				NaN	NaN	0	NaN	5154	4154	9308
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9311	29.486	NaN	4126.7	30	0	1078.1	0.106	+			15512	GVCSTLTIK	9	54	489.76799106914035	NaN	0	489.7679443359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_GVC(Carbamidomethyl (C))STLTIK_	ENST00000589011.1_1_7:20201474-20224697:-|nuORF	58.22992032128504	0.15686832049467786	1				NaN	NaN	0	NaN	5155	4154	9308
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9312	29.487	NaN	2560.6	30	0	309.31	0.106	+			17013	HPTSVISGY	9	53	480.7427344825511	959.4709160319022	2	480.7427062988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HPTSVISGY_	ENSG00000120438|ENST00000321394|TCP1;ENST00000412860.1_1_7:42834686-42835559:+|nuORF;TCP1|p.A232Gfs*7|1|0.05|ENSG00000120438|chr6:159784043-159784044|-/C|frameshift_variant	58.78195531508484	0.22376836668196862	1				NaN	NaN	0	NaN	5156	4154	9308
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9313	29.489	NaN	3769.7	30	0	1485.9	0.106			+	44304	TSDLRISVWVG	11	49	411.5587951538952	1231.6545560618856	3	411.5590515136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TSDLRISVWVG_	REV__ENSG00000008294|ENST00000262013|SPAG9;REV__ENSG00000138834|ENST00000610761|MAPK8IP3;REV__ENST00000511312.2_1_17:49054451-49060019:-|nuORF;REV__nc|ENSG00000008294|O60271-2|SPAG9;REV__nc|ENSG00000008294|O60271-4|SPAG9;REV__nc|ENSG00000008294|O60271-9|SPAG9;REV__nc|ENSG00000138834|Q9UPT6|MAPK8IP3	19.996771675451527	0.7768568223548057	1				NaN	NaN	0	NaN	5157	4154	9308
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9314	29.491	NaN	1514	30	0	178.85	0.106			+	18193	IMGPSLNNQ	9	58	487.2408681132251	972.4671832932502	2	487.24090576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IMGPSLNNQ_	REV__nc|ENSG00000013619|Q13495-3|MAMLD1	39.252832667884924	0.4290233611298554	1				NaN	NaN	0	NaN	5158	4154	9308
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9315	29.493	NaN	3607.2	30	0	1263.5	0.038	+			16794	HPDEKSIITY	10	68	601.8057260168869	1201.5968991005736	2	601.8060913085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HPDEKSIITY_	ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1;SPTBN1|p.K503Rfs*24|1|0.06|ENSG00000115306|chr2:54626095-54626095|G/-|frameshift_variant	101.25262130126117	0.07397688119410509	1				NaN	NaN	0	NaN	5159	4154	9308
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9322	29.511	NaN	8301.9	30	0	2154.6	0.214	+			28438	NEVPVKEL	8	61	464.26073374035695	926.5069145475139	2	464.26043701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NEVPVKEL_	ENSG00000108829|ENST00000225972|LRRC59	124.08010499294276	0.22872207833199332	1				NaN	NaN	0	NaN	5163	4157	9321
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9323	29.514	NaN	7867.8	30	0	3895.7	0.106			+	17317	IAFQGSKSV	9	57	468.76095256402675	935.5073521948535	2	468.7607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IAFQGSKSV_	REV__ENST00000559897.1_1_15:64263709-64322004:-|nuORF	53.351449002276354	0.2690372970092375	1				NaN	NaN	0	NaN	5164	4157	9321
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9324	29.516	NaN	818.89	30	0	71.678	0.106			+	28564	NKFGSDLWF	9	37	371.8493908149829	NaN	0	371.8492431640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NKFGSDLWF_	REV__ENST00000331789.9_1_7:5567138-5567345:-|nuORF	20.94693142431847	0.3660861156085067	1				NaN	NaN	0	NaN	5165	4157	9321
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9325	29.518	NaN	1759.4	30	0	188.18	0.036	+			48176	VTADGALAMEK	11	61	553.2813698787375	1104.5481868242748	2	553.2819213867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTADGALAMEK_	ENSG00000058085|ENST00000264144|LAMC2;nc|ENSG00000058085|Q13753-2|LAMC2	60.1669710687717	0.32196467475348695	1				NaN	NaN	0	NaN	5166	4157	9321
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9333	29.538	NaN	1747.7	30	0	203.04	0.214	+			50501	YANIGKTL	8	57	440.25027803611795	878.4860031390359	2	440.2503356933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YANIGKTL_	ENSG00000115841|ENST00000354545|RMDN2;ENST00000440353.5_1_2:38177721-38224681:+|nuORF;nc|ENSG00000115841|Q96LZ7-2|RMDN2;nc|ENSG00000115841|Q96LZ7-3|RMDN2;nc|ENSG00000115841|Q96LZ7-4|RMDN2;RMDN2|p.F331Efs*33|1|0.12|ENSG00000115841|chr2:37997459-37997462|TGTT/-|frameshift_variant	82.24051045832904	0.30490469762271794	1				NaN	NaN	0	NaN	5171	4160	9332
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9334	29.542	NaN	1964.9	30	0	425.36	0.106			+	1488	AFPLHHHH	8	60	498.25098814997835	994.4874233667567	2	498.2515563964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AFPLHHHH_	REV__ENSG00000139613|ENST00000550164|SMARCC2;REV__nc|ENSG00000139613|Q8TAQ2|SMARCC2	43.626045697637714	0.6338121648150432	1				NaN	NaN	0	NaN	5172	4160	9332
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9335	29.544	NaN	1423.7	30	0	360.9	0.106	+			20959	KKEDIVNGAL	10	55	543.8116138485046	1085.6086747638092	2	543.8134155273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KKEDIVNGAL_	tr|U7SJ80|U7SJ80_FUSNUNSSfamilyneurotransmitter:Na+symporterOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02139PE=4SV=1	39.252832667884924	0.5560298534376815	1				NaN	NaN	0	NaN	5173	4160	9332
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9336	29.545	NaN	946.08	30	0	62.446	0.033				-1	SLASMQAH	8	43	430.69875035529617	NaN	0	430.69903564453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_SLASM(Oxidation (M))QAH_	ENSG00000011590|ENST00000392197|ZBTB32	25.450171626174864	1.7418937515398478	1				NaN	NaN	0	NaN	5174	4160	9332
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9347	29.571	NaN	3884	30	0	648.69	0.214	+			16370	HENEDIYKL	9	68	580.7828679979779	1159.5511830627556	2	580.7831420898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HENEDIYKL_	ENSG00000102753|ENST00000261667|KPNA3;ENSG00000186432|ENST00000334256|KPNA4	109.43880257439609	0.029570636687953285	1				NaN	NaN	0	NaN	5182	4163	9346
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9348	29.574	NaN	2388.2	30	0	616.94	0.106	+			1920	AISAGLIAK	9	48	422.2685557925528	842.5225586519056	2	422.26837158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AISAGLIAK_	ENSG00000204219|ENST00000450454|TCEA3	56.72105179125745	0.24094814563026265	1				NaN	NaN	0	NaN	5183	4163	9346
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9349	29.576	NaN	1504.2	30	0	159.53	0.106	+			38462	SSASALTGLTK	11	54	518.2881700402767	NaN	0	518.2879028320312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSASALTGLTK_	ENSG00000164880|ENST00000404767|INTS1;INTS1|p.Q467Afs*140|1|0.05|ENSG00000164880|chr7:1498439-1498440|-/A|frameshift_variant;INTS1|p.R843Pfs*31|1|0.39|ENSG00000164880|chr7:1487438-1487439|-/G|frameshift_variant	48.601550744091256	0.32536291591840966	1				NaN	NaN	0	NaN	5184	4163	9346
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9350	29.578	NaN	1076.5	30	0	133.37	0.106	+			18265	IPENRVVSY	9	56	538.7908458865041	1075.5671388398082	2	538.7918090820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IPENRVVSY_	ENSG00000106178|ENST00000222902|CCL24	51.19269402634007	0.2889735674168909	1				NaN	NaN	0	NaN	5185	4163	9346
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9351	29.58	NaN	927.57	30	0	176.17	0.106	+			40667	SVASISLTK	9	44	453.26856277628895	904.5225726193779	2	453.2684631347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVASISLTK_	ENST00000298289.6_1_14:50085755-50087389:-|nuORF	42.86426827375447	0.38666266728046506	1				NaN	NaN	0	NaN	5186	4163	9346
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9352	29.581	NaN	860.49	30	0	93.464	0.106	+			29015	NSPVGNQL	8	40	414.7143928907451	NaN	0	414.7142639160156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NSPVGNQL_	ENSG00000010017|ENST00000011619|RANBP9;ENST00000469916.1_1_6:13622596-13632772:-|nuORF;nc|ENSG00000010017|Q96S59-2|RANBP9;nc|ENSG00000010017|Q96S59-3|RANBP9	34.172542307311794	1.7418937515398478	1				NaN	NaN	0	NaN	5187	4163	9346
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9353	29.583	NaN	673.89	30	0	125	0.036			+	-1	VSSLSVGRKM	10	31	360.5341796875	NaN	0	360.5341796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_VSSLSVGRKM(Oxidation (M))_	REV__ENSG00000152527|ENST00000282406|PLEKHH2;REV__ENST00000405223.6_1_2:43871812-43968195:+|nuORF;REV__nc|ENSG00000152527|Q8IVE3-2|PLEKHH2;REV__nc|ENSG00000152527|Q8IVE3-3|PLEKHH2;REV__PLEKHH2|p.K1079Nfs*10|1|0.37|ENSG00000152527|chr2:43742753-43742753|A/-|frameshift_variant;REV__PLEKHH2|p.Y1238Tfs*12|1|0.04|ENSG00000152527|chr2:43753676-43753677|-/ACTTCTGTTTC|frameshift_variant	29.170058357718403	0.40439580130713204	1				NaN	NaN	0	NaN	5188	4163	9346
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9364	29.608	NaN	1845.4	30	0	81.133	0.214				-1	PFLLLTCLF	9	60	562.3161944499905	1122.6178359667808	2	562.3175659179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_PFLLLTC(Carbamidomethyl (C))LF_	ENSG00000138315|ENST00000334011|OIT3;nc|ENSG00000138315|Q8WWZ8-2|OIT3	35.200714571348534	0.47427825964483533	1				NaN	NaN	0	NaN	5196	4166	9363
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9365	29.612	NaN	3151.6	30	0	419.21	0.106	+			17715	IENGKVVSI	9	62	479.78218534058374	957.5498177479675	2	479.7825012207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IENGKVVSI_	ENSG00000176658|ENST00000318217|MYO1D	106.68306549817024	0.032382560583716295	1				NaN	NaN	0	NaN	5197	4166	9363
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9366	29.614	NaN	1418.1	30	0	95.933	0.106	+			11086	FEVPFEQIQ	9	58	568.7838134765625	NaN	0	568.7838134765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FEVPFEQIQ_	ENSG00000067715|ENST00000261205|SYT1	54.776311868738084	0.17377682019723872	1				NaN	NaN	0	NaN	5198	4166	9363
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9367	29.616	NaN	2545.7	30	0	1385.9	0.033	+			302	AAPGPHVAL	9	38	416.7372812248319	831.4600095164639	2	416.73779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AAPGPHVAL_	ENSG00000156381|ENST00000286918|ANKRD9	39.021493756699265	0.43173687394350213	1				NaN	NaN	0	NaN	5199	4166	9363
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9374	29.634	NaN	2130.2	30	0	324.84	0.214	+			47492	VQGVISVPK	9	52	463.7871435072818	925.5597340813637	2	463.7873229980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VQGVISVPK_	ENSG00000168237|ENST00000436784|GLYCTK;nc|ENSG00000168237|Q8IVS8-2|GLYCTK;nc|ENSG00000168237|Q8IVS8-3|GLYCTK;nc|ENSG00000168237|Q8IVS8-4|GLYCTK;nc|ENSG00000168237|Q8IVS8-7|GLYCTK	42.86426827375447	0.38666266728046506	1				NaN	NaN	0	NaN	5203	4169	9373
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9375	29.637	NaN	1992.6	30	0	747.08	0.106	+			12223	GASDVVLYK	9	56	476.2609165050446	NaN	0	476.26104736328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GASDVVLYK_	ENSG00000116120|ENST00000281828|FARSB;FARSB|p.I265*|1|0.36|ENSG00000116120|chr2:222630168-222630168|T/-|frameshift_variant;FARSB|p.I364Nfs*7|1|0.04|ENSG00000116120|chr2:222624353-222624354|-/AACACTCCTTATTG|frameshift_variant	60.11826168202944	0.14881452885248947	1				NaN	NaN	0	NaN	5204	4169	9373
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9376	29.639	NaN	2506.8	30	0	319.85	0.106	+			32102	QSGRMTAAD	9	57	468.7139180046712	935.4132830761424	2	468.7143249511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QSGRMTAAD_	ENSG00000105278|ENST00000262961|ZFR2;nc|ENSG00000105278|Q9UPR6-3|ZFR2;ZFR2|p.G634Afs*20|1|0.07|ENSG00000105278|chr19:3819075-3819075|C/-|frameshift_variant;ZFR2|p.K352Nfs*75|1|0.42|ENSG00000105278|chr19:3825387-3825387|T/-|frameshift_variant;ZFR2|p.P188Rfs*239|1|0.22|ENSG00000105278|chr19:3831695-3831695|G/-|frameshift_variant	25.57405402267927	0.5642445186134241	1				NaN	NaN	0	NaN	5205	4169	9373
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9377	29.641	NaN	1333.9	30	0	137.61	0.033	+			697	AEALVSKGL	9	50	444.2636528551168	886.5127527770336	2	444.2638244628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEALVSKGL_	ENSG00000197157|ENST00000354725|SND1;GAS2L3-SND1|1|fusion;SND1|p.A514Qfs*156|1|0.37|ENSG00000197157|chr7:127929195-127929195|A/-|frameshift_variant	70.8162118820467	0.13725933411854815	1				NaN	NaN	0	NaN	5206	4169	9373
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9384	29.659	NaN	9282.5	30	0	1331.6	0.142	+			50407	YAAQASQAL	9	57	461.7350139743112	921.4554750154224	2	461.73516845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YAAQASQAL_	ENSG00000118705|ENST00000237530|RPN2;ENST00000462163.1_1_20:35807747-35832332:+|nuORF;RPN2|p.G196Afs*41|1|0.12|ENSG00000118705|chr20:37204794-37204794|G/-|frameshift_variant	118.74307786436346	0.02196067127630568	1				NaN	NaN	0	NaN	5210	4172	9383
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9393	29.683	NaN	1458.3	30	0	225.62	0.214	+			25522	LPTENVDKM	9	62	523.7626733240837	1045.5107937149673	2	523.763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LPTENVDKM_	ENSG00000198420|ENST00000479870|TCAF1;ENST00000392900.3_1_7:143551228-143582358:-|nuORF;ENST00000414990.2_3_7:143295168-143301929:+|nuORF;nc|ENSG00000198420|Q9Y4C2-2|TCAF1	47.95952297671804	0.32689736945648856	1				NaN	NaN	0	NaN	5216	4175	9392
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9394	29.686	NaN	2153.9	30	0	220.67	0.106	+			12551	GEGHFGKVEL	10	69	536.774762226931	1071.5349715206619	2	536.7755737304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEGHFGKVEL_	ENSG00000162434|ENST00000342505|JAK1;ENST00000481702.1_1_1:65305238-65306936:-|nuORF	53.08895987439943	0.42869529153390606	1				NaN	NaN	0	NaN	5217	4175	9392
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9395	29.688	NaN	1179.7	30	0	75.365	0.106	+			2918	ASCLPSPLR	9	56	472.255251000284	NaN	0	472.2552490234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASCLPSPLR_	ENST00000338154.10_1_X:53965368-53965482:-|nuORF	31.529811441608018	0.3183796599642538	1				NaN	NaN	0	NaN	5218	4175	9392
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9396	29.69	NaN	5194.8	30	0	1666.1	0.033				-1	 	0	50	439.260448587544	876.506344241888	2	439.7626647949219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	5219	4175	9392
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9402	29.706	NaN	2780.9	30	0	331.2	0.214	+			46814	VIALAGLPPS	10	60	469.2893137870047	936.5640746408094	2	469.289306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VIALAGLPPS_	ENSG00000158553|ENST00000444565|POM121L2;POM121L2|p.D642Gfs*77|1|0.06|ENSG00000158553|chr6:27310248-27310249|-/TACAATTCCT|frameshift_variant;POM121L2|p.P496Qfs*17|1|0.14|ENSG00000158553|chr6:27310684-27310684|G/-|frameshift_variant	29.14955571784316	0.6417842315402807	1				NaN	NaN	0	NaN	5222	4178	9401
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9403	29.71	NaN	2482.3	30	0	998.65	0.035				-1	 	0	58	501.23363463985663	1000.4527163465133	2	501.2342224121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	5223	4178	9401
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9412	29.732	NaN	1138.6	30	0	112.81	0.214	+			13254	GINSFTCLCP	10	47	527.7393536351908	1053.4641543371815	2	527.7394409179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GINSFTCLCP_	ENSG00000148400|ENST00000651671|NOTCH1;NOTCH1|p.Q2403Sfs*19|1|0.51|ENSG00000148400|chr9:136496532-136496532|G/-|frameshift_variant	40.77816245573522	0.5419747034533848	1				NaN	NaN	0	NaN	5229	4181	9411
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9413	29.735	NaN	1649.6	30	0	785.93	0.036			+	11302	FKQGCYPCI	9	52	529.7459496756292	NaN	0	529.7450561523438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FKQGCYPCI_	REV__ENSG00000138738|ENST00000264808|PRDM5;REV__ENST00000505484.5_1_4:121652936-121737791:-|nuORF;REV__nc|ENSG00000138738|Q9NQX1-2|PRDM5;REV__nc|ENSG00000138738|Q9NQX1-4|PRDM5	38.80614096846853	0.28164298475537564	1				NaN	NaN	0	NaN	5230	4181	9411
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9422	29.766	NaN	3207.9	30	0	449.89	0.214			+	8320	EAKGTVSWK	9	62	503.2715169354032	1004.5284809376064	2	503.2718811035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EAKGTVSWK_	REV__ENSG00000089225|ENST00000405440|TBX5;REV__nc|ENSG00000089225|Q99593-2|TBX5;REV__nc|ENSG00000089225|Q99593-3|TBX5;REV__TBX5|p.E486*|1|0.4|ENSG00000089225|chr12:114355634-114355635|-/G|frameshift_variant	36.446750945000026	0.4619375763483977	1				NaN	NaN	0	NaN	5233	4187	9421
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9423	29.769	NaN	2942.4	30	0	887.7	0.106	+			15727	GVSAAFAVK	9	46	425.24466574425907	848.4747785553182	2	425.2449951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GVSAAFAVK_	BZW1|p.L189P|1|0.05|ENSG00000082153|chr2:200818001-200818001|T/C|missense_variant;BZW1|p.N285Tfs*11|2|0.26|ENSG00000082153|chr2:200818782-200818782|A/-|frameshift_variant;BZW1|p.N286*|1|0.04|ENSG00000082153|chr2:200818790-200818791|-/T|frameshift_variant;BZW1|p.S325Rfs*19|1|0.04|ENSG00000082153|chr2:200819989-200819990|-/ACAATATAGAA|frameshift_variant;ENSG00000082153|ENST00000409600|BZW1;nc|ENSG00000082153|Q7L1Q6-2|BZW1;nc|ENSG00000082153|Q7L1Q6-3|BZW1;nc|ENSG00000082153|Q7L1Q6-4|BZW1	113.41158876095287	0.025516849225023126	1				NaN	NaN	0	NaN	5234	4187	9421
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9424	29.771	NaN	2261.6	30	0	281.15	0.106	+			11130	FGADARAL	8	45	410.7188740224226	819.4231951116452	2	410.7190246582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FGADARAL_	ENSG00000144381|ENST00000388968|HSPD1;ENST00000461097.1_1_2:198361816-198363572:-|nuORF;ENST00000476746.5_1_2:198360008-198364584:-|nuORF;HSPD1|p.G441Vfs*14|1|0.04|ENSG00000144381|chr2:197488385-197488385|C/-|frameshift_variant;nc|ENSG00000144381|P10809-2|HSPD1	66.42927471994793	0.4381325844043345	1				NaN	NaN	0	NaN	5235	4187	9421
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9425	29.773	NaN	1447.7	30	0	189.03	0.106			+	42236	TAALITVDK	9	52	466.2766792058069	NaN	0	466.2764892578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TAALITVDK_	REV__ENSG00000145375|ENST00000274008|SPATA5;REV__ENST00000422835.2_1_4:123844270-124023368:+|nuORF;REV__nc|ENSG00000145375|Q8NB90-2|AFG2A	34.172542307311794	0.30503706118289736	1				NaN	NaN	0	NaN	5236	4187	9421
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9426	29.775	NaN	2840.3	30	0	365.59	0.033	+			456	AAVLRSAAL	9	49	436.2713710648322	870.5281891964644	2	436.2712707519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AAVLRSAAL_	ENSG00000167741|ENST00000381550|GGT6;nc|ENSG00000167741|Q6P531-2|GGT6;nc|ENSG00000167741|Q6P531|GGT6	87.69643885390035	0.07135982304947239	1				NaN	NaN	0	NaN	5237	4187	9421
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9432	29.791	NaN	2072.7	30	0	357.75	0.214	+			41906	SVVGGLAVGK	10	54	443.77116314328606	885.5277733533721	2	443.77130126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVVGGLAVGK_	ENSG00000103249|ENST00000382745|CLCN7;ENST00000563822.1_1_16:1505719-1509320:-|nuORF;ENST00000564968.1_1_16:1507514-1509320:-|nuORF;nc|ENSG00000103249|P51798-2|CLCN7;RBCK1-CLCN7|1|fusion;RBCK1-CLCN7|2|fusion	47.657333605630114	0.47858658696240314	1				NaN	NaN	0	NaN	5240	4190	9431
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9433	29.794	NaN	1555.8	30	0	372.84	0.033	+			42242	TAAPPAQPL	9	43	433.24244967578665	864.4703464183733	2	433.2424011230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAAPPAQPL_	BRD2|p.G595Vfs*6|1|0.59|ENSG00000204256|chr6:32978327-32978327|G/-|frameshift_variant;ENSG00000204256|ENST00000374825|BRD2;nc|ENSG00000204256|P25440-2|BRD2;nc|ENSG00000204256|P25440-3|BRD2;nc|ENSG00000204256|P25440-4|BRD2	49.44154591367651	0.3095138337212152	1				NaN	NaN	0	NaN	5241	4190	9431
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9438	29.809	NaN	1094.7	30	0	114.69	0.214	+			51232	YPVGGPSQ	8	40	402.6996492369403	NaN	0	402.7001647949219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YPVGGPSQ_	ENSG00000108061|ENST00000369452|SHOC2;nc|ENSG00000108061|Q9UQ13-2|SHOC2	35.61828744233558	1.7418937515398478	1				NaN	NaN	0	NaN	5243	4193	9437
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9439	29.812	NaN	1462.7	30	0	133.7	0.035				-1	LHGISELDI	9	65	519.7765431286234	1037.5385333240467	2	519.7777099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LHGISELDI_	ENSG00000198420|ENST00000479870|TCAF1;ENST00000392900.3_1_7:143551228-143582358:-|nuORF;ENST00000414990.2_3_7:143295168-143301929:+|nuORF;nc|ENSG00000198420|Q9Y4C2-2|TCAF1	31.954861631926434	0.5046124803899898	1				NaN	NaN	0	NaN	5244	4193	9437
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9446	29.83	NaN	4743.5	30	0	1006.1	0.214	+			6107	AVNNMFVSK	9	62	505.2598436551433	1008.5051343770866	2	505.260498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVNNMFVSK_	ENSG00000100744|ENST00000555181|GSKIP	114.8945686534367	0.024290463251177924	1				NaN	NaN	0	NaN	5248	4196	9445
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9447	29.834	NaN	3117.7	30	0	357.69	0.106	+			49275	VVQEPGQVFK	10	61	565.8134875722799	1129.6124222113597	2	566.3151245117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVQEPGQVFK_	ENSG00000169180|ENST00000304658|XPO6;ENST00000570007.1_1_16:28117306-28117714:-|nuORF;nc|ENSG00000169180|Q96QU8-2|XPO6;XPO6|p.P1120Lfs*4|1|0.28|ENSG00000169180|chr16:28098557-28098557|G/-|frameshift_variant	59.93077597824379	0.36646980200755325	1				NaN	NaN	0	NaN	5249	4196	9445
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9448	29.836	NaN	1812.7	30	0	597.9	0.106			+	16999	HPSVEEKLTY	10	52	601.8057260168869	1201.5968991005736	2	601.8053588867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HPSVEEKLTY_	REV__tr|U7SU31|U7SU31_FUSNUATP-dependentdethiobiotinsynthetaseBioDOS=FusobacteriumnucleatumCTI-5OX=1316586GN=bioDPE=3SV=1	45.97224482568171	0.49411383603842696	1				NaN	NaN	0	NaN	5250	4196	9445
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9449	29.838	NaN	3583	30	0	659.06	0.106	+			16222	HEDLGHVAL	9	61	495.75369751427684	989.4928420953537	2	495.75384521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HEDLGHVAL_	ENSG00000128731|ENST00000261609|HERC2;ENST00000428453.5_1_15:20588586-20667676:-|nuORF;ENST00000430598.5_1_15:20613931-20667676:-|nuORF;ENST00000524476.5_1_15:28882105-28886289:+|nuORF;ENST00000529353.1_1_15:28878360-28886587:+|nuORF;ENST00000529624.5_3_15:28877823-28916776:+|nuORF;ENST00000562687.6_3_16:32769598-32772029:+|nuORF;HERC2|p.G2202Afs*8|1|0.2|ENSG00000128731|chr15:28213923-28213923|C/-|frameshift_variant;HERC2|p.K1446R|1|0.36|ENSG00000128731|chr15:28233678-28233678|T/C|missense_variant;nc|ENSG00000290376|Q9BVR0|HERC2P3	76.84663266511073	0.11118375776443899	1				NaN	NaN	0	NaN	5251	4196	9445
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9450	29.84	NaN	1279.2	30	0	121.26	0.106	+			46837	VIEVGKLKS	9	55	486.8079528808594	NaN	0	486.8079528808594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VIEVGKLKS_	tr|U7SQV9|U7SQV9_FUSNUChromosomepartitionproteinSmcOS=FusobacteriumnucleatumCTI-5OX=1316586GN=smcPE=3SV=1	26.69291269510374	0.34280015626154364	1				NaN	NaN	0	NaN	5252	4196	9445
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9451	29.841	NaN	2043.7	30	0	296.42	0.036	+			38487	SSATLNSIVAK	11	67	545.8081756283602	1089.6017983235204	2	545.81005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSATLNSIVAK_	ENSG00000007944|ENST00000356840|MYLIP;MYLIP|p.K199Rfs*26|1|0.07|ENSG00000007944|chr6:16143150-16143151|-/GAATT|frameshift_variant;MYLIP|p.R317Kfs*8|1|0.09|ENSG00000007944|chr6:16145014-16145015|-/A|frameshift_variant	96.66504779109242	0.07148984068916604	1				NaN	NaN	0	NaN	5253	4196	9445
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9458	29.859	NaN	6559.3	30	0	981.4	0.214	+			5098	ATSPALFNR	9	66	488.764059342093	NaN	0	488.7641296386719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSPALFNR_	DYNC1H1|p.K3112Hfs*3|1|0.31|ENSG00000197102|chr14:102027998-102027999|-/TCACAAG|frameshift_variant;DYNC1H1|p.R3078W|1|0.11|ENSG00000197102|chr14:102027802-102027802|C/T|missense_variant;DYNC1H1|p.W4201Gfs*43|1|0.42|ENSG00000197102|chr14:102043958-102043958|G/-|frameshift_variant;ENSG00000197102|ENST00000360184|DYNC1H1	56.72105179125745	0.16330365735109603	1				NaN	NaN	0	NaN	5257	4199	9457
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9459	29.863	NaN	3353.6	30	0	571.07	0.036	+			10494	EVSKIVQTY	9	58	533.7926528574936	1065.5707527817872	2	533.7935791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EVSKIVQTY_	ENSG00000072110|ENST00000394419|ACTN1;nc|ENSG00000072110|P12814-2|ACTN1;nc|ENSG00000072110|P12814-4|ACTN1;nc|ENSG00000072110|P12814|ACTN1	168.25843898104137	0.0030641937004078144	1				NaN	NaN	0	NaN	5258	4199	9457
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9471	29.889	NaN	9477.9	30	0	2064.4	0.214	+			48296	VTEGSFVYK	9	66	515.2658150338275	1028.517077134455	2	515.2662963867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTEGSFVYK_	ENSG00000057608|ENST00000380191|GDI2;GDI2|p.S222Afs*20|1|0.1|ENSG00000057608|chr10:5785197-5785197|T/-|frameshift_variant	162.25246889848123	0.0040893836092247005	1				NaN	NaN	0	NaN	5267	4202	9470
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9472	29.892	NaN	1136.4	30	0	559.7	0.106				-1	 	0	21	343.1989294024513	684.3833058717026	2	343.1990966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	5268	4202	9470
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9473	29.894	NaN	2975.3	30	0	446.57	0.106			+	37389	SLGADRVQI	9	59	479.768978284945	957.52340363669	2	479.7688293457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLGADRVQI_	REV__ENSG00000086589|ENST00000199814|RBM22;REV__ENST00000521248.5_1_5:150076301-150080613:-|nuORF;REV__ENST00000521594.1_1_5:150076301-150080167:-|nuORF;REV__ENST00000522469.5_1_5:150075051-150080604:-|nuORF;REV__nc|ENSG00000086589|Q9NW64-2|RBM22	44.377184641726394	0.36891676396732553	1				NaN	NaN	0	NaN	5269	4202	9470
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9474	29.896	NaN	857.8	30	0	116.01	0.106	+			10668	EYSGINGMI	9	45	492.22930130981166	NaN	0	492.22943115234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EYSGINGMI_	tr|U7SPH1|U7SPH1_FUSNUGeranyltranstransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01735PE=3SV=1	20.94693142431847	0.3660861156085067	1				NaN	NaN	0	NaN	5270	4202	9470
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9475	29.898	NaN	2014.5	30	0	189.92	0.037	+			8562	EAWASKDATY	10	51	571.2613769743565	1140.508201015513	2	571.2622680664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EAWASKDATY_	ENSG00000166508|ENST00000303887|MCM7;nc|ENSG00000166508|P33993-3|MCM7	123.20810148215591	0.02279876478776198	1				NaN	NaN	0	NaN	5271	4202	9470
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9485	29.921	NaN	3146.8	30	0	624.21	0.143	+			1930	AISEYIATK	9	63	498.2734766693732	994.5324004055465	2	498.2737731933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AISEYIATK_	ENSG00000095002|ENST00000233146|MSH2;MSH2|p.M813Nfs*11|1|0.17|ENSG00000095002|chr2:47478497-47478498|-/A|frameshift_variant;MSH2|p.T806Kfs*4|1|0.2|ENSG00000095002|chr2:47478472-47478478|CACTCAC/-|frameshift_variant;nc|ENSG00000095002|P43246-2|MSH2	77.31757898189308	0.1091473830098891	1				NaN	NaN	0	NaN	5278	4205	9484
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9494	29.945	NaN	8168	30	0	1359.3	0.214	+			8187	EAAVAIKAM	9	62	452.25195545916876	902.4893579851375	2	452.25189208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EAAVAIKAM_	ENSG00000132507|ENST00000336458|EIF5A;ENSG00000253626|ENST00000520547|EIF5AL1;nc|ENSG00000132507|P63241-2|EIF5A	161.89823264540465	0.004149850016316161	1				NaN	NaN	0	NaN	5284	4208	9493
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9495	29.948	NaN	4389	30	0	937.47	0.106	+			32509	QVQLGVAL	8	52	414.25259272807904	826.4906325229581	2	414.2526550292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QVQLGVAL_	ENST00000556123.1_1_14:69951498-69951735:+|nuORF	42.47446043378293	0.6409579893742323	1				NaN	NaN	0	NaN	5285	4208	9493
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9496	29.95	NaN	3850.7	30	0	904.77	0.106	+			30956	QENSRVIVM	9	60	538.2815272604428	1074.5485015876855	2	538.2821044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QENSRVIVM_	ENSG00000111679|ENST00000318974|PTPN6;ENSG00000179295|ENST00000351677|PTPN11;ENST00000416215.6_1_12:7061038-7070080:+|nuORF;ENST00000511359.1_1_5:23303923-23304922:-|nuORF;nc|ENSG00000111679|P29350-2|PTPN6;nc|ENSG00000111679|P29350-3|PTPN6;nc|ENSG00000111679|P29350-4|PTPN6;nc|ENSG00000179295|Q06124-1|PTPN11;nc|ENSG00000179295|Q06124-3|PTPN11	45.97224482568171	0.3502073465782774	1				NaN	NaN	0	NaN	5286	4208	9493
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9497	29.952	NaN	3118.2	30	0	687.7	0.106	+			3340	ASMPVDIAK	9	48	466.24901313712	930.48347334104	2	466.24981689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASMPVDIAK_	ENSG00000108528|ENST00000225665|SLC25A11;ENST00000574710.1_1_17:4841038-4842521:-|nuORF;nc|ENSG00000108528|Q02978-2|SLC25A11	52.936696900407355	0.27249468807391813	1				NaN	NaN	0	NaN	5287	4208	9493
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9498	29.954	NaN	1542.3	30	0	141.27	0.036	+			26778	LVQYDLKNP	9	62	545.3013514513981	NaN	0	545.3016967773438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LVQYDLKNP_	ENSG00000143569|ENST00000428931|UBAP2L;nc|ENSG00000143569|Q14157-1|UBAP2L;nc|ENSG00000143569|Q14157-3|UBAP2L;nc|ENSG00000143569|Q14157-4|UBAP2L;nc|ENSG00000143569|Q14157-5|UBAP2L	39.252832667884924	0.27938773122138094	1				NaN	NaN	0	NaN	5288	4208	9493
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9506	29.972	NaN	4008.1	30	0	454.66	0.214	+			40454	STVQILGAEK	10	65	523.2976974066385	1044.5808418800768	2	523.2980346679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STVQILGAEK_	ENSG00000055044|ENST00000264279|NOP58;ENSG00000101361|ENST00000329276|NOP56;ENST00000480992.5_1_20:2635438-2636687:+|nuORF;ENST00000484998.5_1_20:2635830-2636687:+|nuORF	120.63048641472336	0.026439265609364573	1				NaN	NaN	0	NaN	5293	4211	9505
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9507	29.976	NaN	8192.7	30	0	5091.5	0.037	+			40732	SVCVLDLRK	9	53	363.8740446836908	1088.6003046512724	3	363.8741760253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SVC(Carbamidomethyl (C))VLDLRK_	ENSG00000101849|ENST00000645353|TBL1X;ENSG00000177565|ENST00000457928|TBL1XR1;nc|ENSG00000101849|O60907-2|TBL1X;TBL1X|p.G568S|1|0.45|ENSG00000101849|chrX:9714998-9714998|G/A|missense_variant	61.691277971877994	0.19951612995419254	1				NaN	NaN	0	NaN	5294	4211	9505
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9513	29.992	NaN	1926.6	30	0	1099.1	0.144				-1	LSMILMVII	9	28	350.2095083768877	1047.606695730863	3	350.2098083496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LSMILM(Oxidation (M))VII_	ENSG00000070214|ENST00000374720|SLC44A1;nc|ENSG00000070214|Q8WWI5-2|SLC44A1;nc|ENSG00000070214|Q8WWI5-3|SLC44A1	19.996771675451527	0.6112419832031292	1				NaN	NaN	0	NaN	5297	4214	9512
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9521	30.014	NaN	5872.6	30	0	1810.9	0.214	+			31269	QHSSLCKTY	9	68	533.7530211156449	1065.4914892980896	2	533.7532958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QHSSLCKTY_	ENSG00000174145|ENST00000309447|NWD2;NWD2|p.D1262Gfs*18|1|0.39|ENSG00000174145|chr4:37445769-37445770|-/G|frameshift_variant;NWD2|p.E713Rfs*7|1|0.36|ENSG00000174145|chr4:37444124-37444124|G/-|frameshift_variant;NWD2|p.K1317Nfs*43|1|0.35|ENSG00000174145|chr4:37445936-37445936|A/-|frameshift_variant;NWD2|p.W1259Gfs*22|4|0.26|ENSG00000174145|chr4:37445757-37445757|T/-|frameshift_variant	84.9155231211612	0.07920012719736333	1				NaN	NaN	0	NaN	5302	4217	9520
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9522	30.018	NaN	3736.4	30	0	496.42	0.106	+			14678	GTIGDMMQK	9	57	490.73055079427087	979.4465486553418	2	490.73016357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTIGDMMQK_	ENSG00000107874|ENST00000369937|CUEDC2;ENST00000477994.1_1_10:104183924-104192326:-|nuORF	93.1432384553994	0.056003526918089595	1				NaN	NaN	0	NaN	5303	4217	9520
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9523	30.019	NaN	1501.5	30	0	142.2	0.034			+	-1	EMGQATQR	8	50	468.71396231310325	NaN	0	468.7137451171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_EM(Oxidation (M))GQATQR_	REV__ENST00000460610.1_1_3:12632295-12641253:-|nuORF;REV__ENST00000494557.1_1_3:12632295-12633310:-|nuORF	31.954861631926434	1.7418937515398478	1				NaN	NaN	0	NaN	5304	4217	9520
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9534	30.045	NaN	6683.6	30	0	1069.4	0.214	+			50558	YAVEGRDL	8	76	461.735009686409	921.455466439618	2	461.7349548339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YAVEGRDL_	ENSG00000163479|ENST00000295702|SSR2;ENST00000368311.5_1_1:155984733-155990735:-|nuORF;ENST00000472898.5_1_1:155981561-155990687:-|nuORF;ENST00000484320.6_1_1:155988041-155990687:-|nuORF;ENST00000532074.5_1_1:155984857-155990687:-|nuORF	71.87747018426188	0.391254423828572	1				NaN	NaN	0	NaN	5312	4220	9533
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9535	30.048	NaN	1443.9	30	0	243.4	0.106	+			48254	VTDGFSSLK	9	52	477.25043181471744	NaN	0	477.25054931640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTDGFSSLK_	ENSG00000110245|ENST00000227667|APOC3	36.446750945000026	0.29355505452396785	1				NaN	NaN	0	NaN	5313	4220	9533
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9536	30.05	NaN	1000.7	30	0	244.59	0.106				-1	 	0	38	439.260448587544	876.506344241888	2	439.2606201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	5314	4220	9533
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9537	30.052	NaN	3433.3	30	0	443.79	0.106	+			39683	STIGVDGSVYK	11	63	563.2928500422122	1124.5711471512243	2	563.2930297851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STIGVDGSVYK_	ENSG00000159399|ENST00000290573|HK2;ENST00000447818.2_1_X:79828255-79829731:-|nuORF	106.88024417677582	0.046463184254991054	1				NaN	NaN	0	NaN	5315	4220	9533
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9538	30.054	NaN	2943.9	30	0	393.98	0.106	+			5999	AVMDGNVITAK	11	74	559.7979618296364	1117.5813707260727	2	559.7987060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVMDGNVITAK_	ENSG00000103316|ENST00000572914|CRYM;ENST00000571666.1_1_16:21273345-21289551:-|nuORF	70.72838890466396	0.22966736524121345	1				NaN	NaN	0	NaN	5316	4220	9533
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9539	30.056	NaN	3746.8	30	0	542.12	0.106	+			1025	AEKLGGSAVI	10	53	472.7742580433167	943.5339631534334	2	472.7740478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEKLGGSAVI_	ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65622809-65623088:-|nuORF	76.16968421966216	0.22691431239609447	1				NaN	NaN	0	NaN	5317	4220	9533
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9540	30.057	NaN	1129.8	30	0	69.277	0.036	+			33106	RELQRASIL	9	48	543.3251953125	NaN	0	543.3251953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RELQRASIL_	ENSG00000188878|ENST00000636174|FBF1;ENST00000585990.5_1_17:73910371-73916335:-|nuORF;ENST00000593156.1_1_17:73913837-73918141:-|nuORF;nc|ENSG00000188878|Q8TES7-2|FBF1;nc|ENSG00000188878|Q8TES7-5|FBF1;nc|ENSG00000188878|Q8TES7|FBF1	26.063383197487333	0.34597851983111116	1				NaN	NaN	0	NaN	5318	4220	9533
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9551	30.083	NaN	1851.9	30	0	96.008	0.143	+			36864	SIFRTPISK	9	58	524.810781353092	1047.607009772984	2	524.8118896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIFRTPISK_	ASPM|p.I1717Nfs*24|1|0.43|ENSG00000066279|chr1:197104101-197104102|-/T|frameshift_variant;ASPM|p.I3229Nfs*2|1|0.48|ENSG00000066279|chr1:197090339-197090340|-/T|frameshift_variant;ASPM|p.K671Nfs*3|1|0.21|ENSG00000066279|chr1:197139780-197139780|T/-|frameshift_variant;ASPM|p.L1872Ffs*24|1|0.43|ENSG00000066279|chr1:197103635-197103636|-/A|frameshift_variant;ASPM|p.M2261*|1|0.44|ENSG00000066279|chr1:197102470-197102470|T/-|frameshift_variant;ASPM|p.N1062Rfs*28|1|0.1|ENSG00000066279|chr1:197124311-197124315|TAAGT/-|frameshift_variant;ASPM|p.N1680Kfs*11|1|0.33|ENSG00000066279|chr1:197104211-197104212|-/T|frameshift_variant;ASPM|p.Q2620Nfs*22|1|0.15|ENSG00000066279|chr1:197101393-197101394|-/TT|frameshift_variant;ASPM|p.Q2620Tfs*17|1|0.19|ENSG00000066279|chr1:197101393-197101394|-/T|frameshift_variant;ENSG00000066279|ENST00000367409|ASPM;nc|ENSG00000066279|Q8IZT6-2|ASPM	41.42661286455405	0.403525789677298	1				NaN	NaN	0	NaN	5326	4223	9550
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9556	30.099	NaN	2699.5	30	0	591.7	0.214			+	45390	TVTMATAAVV	10	49	482.26267602035006	962.5107991075001	2	482.26275634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVTMATAAVV_	REV__tr|U7T0W6|U7T0W6_FUSNUMFStransporter,AGZAfamily,xanthine/uracilpermeaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00716PE=4SV=1	35.61828744233558	0.588957954432594	1				NaN	NaN	0	NaN	5328	4226	9555
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9557	30.103	NaN	2909.4	30	0	906	0.106	+			39772	STKGLGLAL	9	52	430.26612338914896	858.5176938450979	2	430.2661437988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STKGLGLAL_	ENSG00000175877|ENST00000320531|TMEM270	51.33545320467046	0.2872990594074956	1				NaN	NaN	0	NaN	5329	4226	9555
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9558	30.105	NaN	1878	30	0	184.7	0.036	+			49555	VYASLAKGIK	10	63	525.3201836455252	1048.6258143578502	2	525.321533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYASLAKGIK_	ENSG00000165970|ENST00000525748|SLC6A5;nc|ENSG00000165970|Q9Y345-2|SLC6A5;nc|ENSG00000165970|Q9Y345-3|SLC6A5	44.377184641726394	0.5088115166961078	1				NaN	NaN	0	NaN	5330	4226	9555
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9569	30.128	NaN	2074.7	30	0	206.91	0.214			+	36604	SGDSVMAKAL	10	64	489.74989694145467	NaN	0	489.7496643066406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SGDSVMAKAL_	REV__AKAP7|p.I239*|1|0.37|ENSG00000118507|chr6:131219667-131219667|A/-|frameshift_variant;REV__AKAP7|p.I239Nfs*4|1|0.17|ENSG00000118507|chr6:131219666-131219667|-/A|frameshift_variant;REV__ENSG00000118507|ENST00000431975|AKAP7;REV__ENST00000535150.1_1_6:131486241-131520610:+|nuORF;REV__ENST00000543815.5_1_6:131486241-131540820:+|nuORF	36.446750945000026	0.3805027428805705	1				NaN	NaN	0	NaN	5338	4229	9568
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9570	30.132	NaN	2137.5	30	0	273.75	0.106	+			6000	AVMDGNVITAK	11	67	559.7979618296364	1117.5813707260727	2	559.79833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVMDGNVITAK_	ENSG00000103316|ENST00000572914|CRYM;ENST00000571666.1_1_16:21273345-21289551:-|nuORF	45.764366957710365	0.4790689093891431	1				NaN	NaN	0	NaN	5339	4229	9568
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9571	30.134	NaN	629.51	30	0	182.75	0.106			+	5846	AVILPKVVAP	10	27	336.22743761491415	NaN	0	336.2273254394531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVILPKVVAP_	REV__ENSG00000066739|ENST00000359933|ATG2B	8.235088202721068	0.4201028297492154	1				NaN	NaN	0	NaN	5340	4229	9568
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9572	30.136	NaN	3428.5	30	0	1267.3	0.036	+			32383	QVCDVVLNH	9	58	542.2663305065589	1082.5181080799177	2	542.26708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_QVC(Carbamidomethyl (C))DVVLNH_	ENSG00000050327|ENST00000056217|ARHGEF5;nc|ENSG00000050327|Q12774-2|ARHGEF5	69.6276240434122	0.14239879520340665	1				NaN	NaN	0	NaN	5341	4229	9568
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9581	30.157	NaN	1745.5	30	0	297.1	0.214	+			13603	GLVVPAAQPP	10	57	474.7792501442031	947.5439473552062	2	474.7795715332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GLVVPAAQPP_	ENSG00000179698|ENST00000323662|WDR97	33.51558372728122	0.606129482617362	1				NaN	NaN	0	NaN	5347	4232	9580
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9582	30.161	NaN	2184.2	30	0	267.92	0.035	+			27376	MKFYPIEA	8	59	499.7531150399055	997.491677146611	2	499.75653076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MKFYPIEA_	tr|U7SNH4|U7SNH4_FUSNUCitrate-sodiumsymporterOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01991PE=4SV=1	47.91560031466742	0.6071945918984287	1				NaN	NaN	0	NaN	5348	4232	9580
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9592	30.185	NaN	2468.2	30	0	258.41	0.214	+			28092	NAFKEITTM	9	62	535.7635533140764	1069.5125536949527	2	535.7645263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_NAFKEITTM(Oxidation (M))_	ENSG00000137947|ENST00000370500|GTF2B;ENST00000486078.1_1_1:89325774-89329699:-|nuORF;ENST00000494819.5_1_1:89324456-89357188:-|nuORF	101.25262130126117	0.03792372629710479	1				NaN	NaN	0	NaN	5355	4235	9591
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9593	30.188	NaN	1942	30	0	259.01	0.033			+	15709	GVPGGAPTPL	10	55	433.24244967578665	864.4703464183733	2	433.2425537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GVPGGAPTPL_	REV__ENSG00000187605|ENST00000409262|TET3;REV__ENST00000475405.2_1_2:74274397-74300767:+|nuORF;REV__nc|ENSG00000187605|O43151-2|TET3;REV__nc|ENSG00000187605|O43151-3|TET3;REV__TET3|p.A1477Pfs*54|1|0.32|ENSG00000187605|chr2:74101214-74101214|G/-|frameshift_variant;REV__TET3|p.A764Lfs*2|1|0.23|ENSG00000187605|chr2:74048203-74048203|G/-|frameshift_variant;REV__TET3|p.F1385Lfs*17|1|0.17|ENSG00000187605|chr2:74100936-74100936|C/-|frameshift_variant;REV__TET3|p.P728Lfs*38|1|0.25|ENSG00000187605|chr2:74048095-74048095|C/-|frameshift_variant;REV__TET3|p.S1618Afs*5|2|0.34|ENSG00000187605|chr2:74101634-74101634|C/-|frameshift_variant;REV__TET3|p.T1749Hfs*5|2|0.29|ENSG00000187605|chr2:74102024-74102025|-/G|frameshift_variant;REV__TET3|p.V1242Gfs*44|1|0.4|ENSG00000187605|chr2:74100510-74100511|-/G|frameshift_variant	24.20275056022122	0.6821818413321409	1				NaN	NaN	0	NaN	5356	4235	9591
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9603	30.212	NaN	1215.9	30	0	106.04	0.214			+	37468	SLKGISSLY	9	50	484.2764860557666	NaN	0	484.2770690917969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLKGISSLY_	REV__ENSG00000009413|ENST00000368802|REV3L;REV__nc|ENSG00000009413|O60673-2|REV3L;REV__REV3L|p.G2684Vfs*11|1|0.35|ENSG00000009413|chr6:111329724-111329724|T/-|frameshift_variant;REV__REV3L|p.I1992Lfs*2|1|0.29|ENSG00000009413|chr6:111367814-111367814|T/-|frameshift_variant;REV__REV3L|p.N1694Mfs*4|2|0.16|ENSG00000009413|chr6:111373274-111373274|T/-|frameshift_variant	34.172542307311794	0.30503706118289736	1				NaN	NaN	0	NaN	5363	4238	9602
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9604	30.215	NaN	1583.7	30	0	166.49	0.106			+	26766	LVQEANYL	8	52	475.25171848681487	NaN	0	475.2513732910156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LVQEANYL_	REV__ENSG00000159128|ENST00000290219|IFNGR2;REV__IFNGR2|p.C174Vfs*29|2|0.48|ENSG00000159128|chr21:33426985-33426985|T/-|frameshift_variant	55.50420428727701	1.7418937515398478	1				NaN	NaN	0	NaN	5364	4238	9602
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9605	30.217	NaN	3138	30	0	841.88	0.106	+			23373	LAADCAHEL	9	58	471.7208181904435	941.427083447687	2	471.72100830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LAADCAHEL_	ENSG00000157379|ENST00000288111|DHRS1;ENST00000558340.1_1_14:24760067-24761569:-|nuORF;ENST00000561137.5_1_14:24760413-24761527:-|nuORF;ENST00000561273.5_1_14:24760714-24761569:-|nuORF	94.00642277110589	0.05356993013874309	1				NaN	NaN	0	NaN	5365	4238	9602
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9606	30.219	NaN	1967.4	30	0	358.37	0.106	+			40557	SVAECQLMK	9	57	504.74690986683845	1007.4792668004769	2	505.24884033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVAECQLMK_	ENSG00000105221|ENST00000392038|AKT2;ENST00000391844.8_1_19:40739781-40791100:-|nuORF;ENST00000537834.5_1_19:40745726-40771198:-|nuORF;nc|ENSG00000105221|P31751-2|AKT2	45.97224482568171	0.3502073465782774	1				NaN	NaN	0	NaN	5366	4238	9602
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9607	30.221	NaN	2662.6	30	0	519.09	0.106	+			7246	DALRCVNNY	9	64	562.7608059191391	1123.507058905078	2	562.7633056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_DALRC(Carbamidomethyl (C))VNNY_	ENSG00000143155|ENST00000367833|TIPRL;nc|ENSG00000143155|O75663-2|TIPRL;TIPRL|p.F156Lfs*13|1|0.33|ENSG00000143155|chr1:168191448-168191448|T/-|frameshift_variant	79.71258880314673	0.09879134589249085	1				NaN	NaN	0	NaN	5367	4238	9602
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9608	30.222	NaN	1298.1	30	0	104.75	0.035	+			28219	NAVKLDDTY	9	53	519.7594475800321	NaN	0	519.7601318359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NAVKLDDTY_	DNAJC7|p.N369Mfs*6|3|0.26|ENSG00000168259|chr17:41982380-41982380|T/-|frameshift_variant;ENSG00000168259|ENST00000457167|DNAJC7;nc|ENSG00000168259|Q99615-2|DNAJC7	60.11826168202944	0.14881452885248947	1				NaN	NaN	0	NaN	5368	4238	9602
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9619	30.248	NaN	9915.8	30	0	3713.7	0.214	+			18830	IVAGSLITK	9	63	451.2894246540884	900.5642963749768	2	451.2891845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IVAGSLITK_	ENSG00000196504|ENST00000545856|PRPF40A;nc|ENSG00000196504|O75400-2|PRPF40A;nc|ENSG00000196504|O75400|PRPF40A;PRPF40A|p.K411Sfs*40|2|0.19|ENSG00000196504|chr2:152672597-152672597|T/-|frameshift_variant;PRPF40A|p.Q412Afs*4|1|0.16|ENSG00000196504|chr2:152672596-152672597|-/T|frameshift_variant	101.25262130126117	0.03792372629710479	1				NaN	NaN	0	NaN	5376	4241	9618
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9620	30.251	NaN	2296.8	30	0	500.34	0.106	+			30504	QAFGSGNNSY	10	57	522.7222688900092	1043.4299848468183	2	522.7235107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QAFGSGNNSY_	ENSG00000120948|ENST00000240185|TARDBP;nc|ENSG00000120948|Q13148-4|TARDBP	53.08895987439943	0.42869529153390606	1				NaN	NaN	0	NaN	5377	4241	9618
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9621	30.253	NaN	2373.4	30	0	496.69	0.106	+			27981	MVPKDLGK	8	52	444.2540897461797	886.4936265591595	2	444.2544250488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MVPKDLGK_	ENSG00000185760|ENST00000370398|KCNQ5;nc|ENSG00000185760|Q9NR82-2|KCNQ5;nc|ENSG00000185760|Q9NR82-3|KCNQ5;nc|ENSG00000185760|Q9NR82-5|KCNQ5;nc|ENSG00000185760|Q9NR82-6|KCNQ5;nc|ENSG00000185760|Q9NR82-7|KCNQ5	50.0245360154114	0.5941082100236891	1				NaN	NaN	0	NaN	5378	4241	9618
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9622	30.255	NaN	1832.3	30	0	166.51	0.034				-1	NNLKAMEQ	8	52	482.233980443603	962.453407954006	2	482.23284912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_NNLKAM(Oxidation (M))EQ_	CEP97|p.K618Nfs*15|1|0.41|ENSG00000182504|chr3:101762516-101762516|A/-|frameshift_variant;ENSG00000182504|ENST00000341893|CEP97;nc|ENSG00000182504|Q8IW35-2|CEP97	34.172542307311794	0.6954784234644539	1				NaN	NaN	0	NaN	5379	4241	9618
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9633	30.28	NaN	3241	30	0	484.59	0.214	+			43199	TEVIHTGTL	9	58	485.7639777636864	969.5134025941728	2	485.7638854980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEVIHTGTL_	ENSG00000182986|ENST00000682928|ZNF320;ENSG00000189190|ENST00000692063|ZNF600;ENSG00000203326|ENST00000474037|ZNF525;ENSG00000204604|ENST00000595646|ZNF468;ENSG00000213020|ENST00000652185|ZNF611;ENSG00000213793|ENST00000638862|ZNF888;ENSG00000213799|ENST00000458035|ZNF845;nc|ENSG00000189190|Q6ZNG1|ZNF600;nc|ENSG00000204604|Q5VIY5-2|ZNF468;nc|ENSG00000213020|Q8N823-2|ZNF611;nc|ENSG00000293246|Q8N8H1|ZNF321P;ZNF468|p.K232Nfs*4|1|0.3|ENSG00000204604|chr19:52841598-52841598|T/-|frameshift_variant;ZNF525|p.S149Yfs*51|1|0.05|ENSG00000203326|chr19:53381024-53381025|-/ATTGC|frameshift_variant;ZNF611|p.F463Lfs*36|1|0.09|ENSG00000213020|chr19:52705666-52705666|A/-|frameshift_variant;ZNF611|p.K221Nfs*6|1|0.35|ENSG00000213020|chr19:52706392-52706392|T/-|frameshift_variant	96.19043198914106	0.047412499214244314	1				NaN	NaN	0	NaN	5387	4244	9632
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9634	30.284	NaN	5127.1	30	0	3124.5	0.106				-1	SVESSLCQRK	10	39	398.5361204882957	1192.586532065087	3	398.87066650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SVESSLC(Carbamidomethyl (C))QRK_	ENST00000563837.1_1_16:1027070-1031229:-|nuORF	27.047317107675042	0.6589519614906109	1				NaN	NaN	0	NaN	5388	4244	9632
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9635	30.286	NaN	1704.5	30	0	245.45	0.106			+	-1	NCIDCKVL	8	61	511.2442228309094	1020.4738927286188	2	511.24383544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_NC(Carbamidomethyl (C))IDC(Carbamidomethyl (C))KVL_	REV__ENSG00000177853|ENST00000316045|ZNF518A;REV__ZNF518A|p.I1254Nfs*11|1|0.18|ENSG00000177853|chr10:96160075-96160076|-/A|frameshift_variant;REV__ZNF518A|p.L1107Ffs*8|1|0.31|ENSG00000177853|chr10:96159635-96159636|-/T|frameshift_variant;REV__ZNF518A|p.N426Mfs*2|1|0.29|ENSG00000177853|chr10:96157595-96157595|A/-|frameshift_variant;REV__ZNF518A|p.R303Kfs*10|1|0.3|ENSG00000177853|chr10:96157223-96157224|-/A|frameshift_variant	55.50420428727701	0.5462892107279674	1				NaN	NaN	0	NaN	5389	4244	9632
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9636	30.287	NaN	3754.7	30	0	332.89	0.035	+			2509	APVEVTHNF	9	67	507.25615193131847	1012.497750929437	2	507.256103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_APVEVTHNF_	ENSG00000005007|ENST00000262803|UPF1;nc|ENSG00000005007|Q92900|UPF1	90.60085204095205	0.06317133949006545	1				NaN	NaN	0	NaN	5390	4244	9632
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9648	30.313	NaN	5792.7	30	0	2097.3	0.214	+			42219	TAAHKKLCLKM	11	47	415.23824677425034	1242.6929109229511	3	415.23846435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAAHKKLCLKM_	ENSG00000141161|ENST00000394570|UNC45B;nc|ENSG00000141161|Q8IWX7-2|UNC45B;nc|ENSG00000141161|Q8IWX7|UNC45B	31.634271133179894	0.6579734920221648	1				NaN	NaN	0	NaN	5399	4247	9647
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9649	30.316	NaN	1344.5	30	0	121.04	0.106	+			5662	AVDQIAFQK	9	49	510.27988739019014	NaN	0	510.2798767089844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVDQIAFQK_	ENSG00000144554|ENST00000675286|FANCD2;FANCD2|p.I1249Nfs*2|1|0.48|ENSG00000144554|chr3:10090346-10090347|-/A|frameshift_variant;FANCD2|p.N890Ifs*14|1|0.36|ENSG00000144554|chr3:10073312-10073312|A/-|frameshift_variant;nc|ENSG00000144554|Q9BXW9-1|FANCD2;nc|ENSG00000144554|Q9BXW9-3|FANCD2;nc|ENSG00000144554|Q9BXW9-4|FANCD2	53.59686742100583	0.1819050072601507	1				NaN	NaN	0	NaN	5400	4247	9647
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9650	30.318	NaN	2594.8	30	0	525.72	0.036			+	21557	KNWKGQVDD	9	64	545.2710546214554	1088.5275563097107	2	545.2727661132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KNWKGQVDD_	REV__ENSG00000152818|ENST00000367545|UTRN;REV__nc|ENSG00000152818|P46939-2|UTRN;REV__UTRN|p.G3160*|1|0.03|ENSG00000152818|chr6:144821001-144821002|AG/-|frameshift_variant;REV__UTRN|p.K1847Ffs*66|1|0.07|ENSG00000152818|chr6:144516945-144516946|-/TTTAA|frameshift_variant;REV__UTRN|p.R3003Pfs*5|1|0.27|ENSG00000152818|chr6:144793915-144793916|-/C|frameshift_variant;REV__UTRN|p.T2422Hfs*35|1|0.47|ENSG00000152818|chr6:144557282-144557282|A/-|frameshift_variant	40.77816245573522	0.41113185337114944	1				NaN	NaN	0	NaN	5401	4247	9647
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9661	30.342	NaN	2739.6	30	0	523	0.214	+			31291	QIFKMLPP	8	59	487.2821933905136	972.5498338478272	2	487.2817687988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QIFKMLPP_	ENSG00000085982|ENST00000678225|USP40;nc|ENSG00000085982|Q9NVE5-3|USP40;nc|ENSG00000085982|Q9NVE5|USP40;USP40|p.F846Lfs*16|1|0.24|ENSG00000085982|chr2:233510121-233510121|A/-|frameshift_variant;USP40|p.N976Hfs*17|1|0.07|ENSG00000085982|chr2:233491251-233491252|-/TGATATGG|frameshift_variant	44.53106598305862	0.628196326904373	1				NaN	NaN	0	NaN	5409	4250	9660
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9662	30.346	NaN	2476.7	30	0	212.93	0.034	+			18769	ITPRVAVPT	9	63	477.292662678274	952.570772423348	2	477.2957763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ITPRVAVPT_	ENST00000427762.1_1_1:59096724-59097153:-|nuORF	39.252832667884924	0.4290233611298554	1				NaN	NaN	0	NaN	5410	4250	9660
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9673	30.37	NaN	3451.2	30	0	639.9	0.142	+			17594	IEESLRIS	8	58	473.7638503033014	945.5131476734028	2	473.763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IEESLRIS_	tr|U7T6K5|U7T6K5_FUSNUHelicaseC-terminaldomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00274PE=4SV=1	56.72105179125745	0.5342425954139568	1				NaN	NaN	0	NaN	5418	4253	9672
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9680	30.388	NaN	3993.5	30	0	730.84	0.214	+			51218	YPTQPGQGY	9	60	505.73237242617085	1009.4501919191417	2	505.73309326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YPTQPGQGY_	ENSG00000089280|ENST00000254108|FUS;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;FUS|p.P152Lfs*33|1|0.31|ENSG00000089280|chr16:31184324-31184324|C/-|frameshift_variant;nc|ENSG00000089280|P35637-2|FUS	58.22992032128504	0.22837015374068087	1				NaN	NaN	0	NaN	5422	4256	9679
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9681	30.391	NaN	6423	30	0	3041.9	0.106			+	45991	VATPVLREL	9	61	499.30581291222944	996.5970728912589	2	499.3064270019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VATPVLREL_	REV__ENSG00000146247|ENST00000275034|PHIP;REV__PHIP|p.F350Lfs*32|1|0.15|ENSG00000146247|chr6:79017528-79017528|A/-|frameshift_variant;REV__PHIP|p.G351Wfs*16|1|0.05|ENSG00000146247|chr6:79017527-79017528|-/A|frameshift_variant;REV__PHIP|p.R1463Gfs*3|1|0.3|ENSG00000146247|chr6:78946244-78946244|T/-|frameshift_variant	37.81151784470057	0.4459294069877048	1				NaN	NaN	0	NaN	5423	4256	9679
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9682	30.393	NaN	1771.4	30	0	575.22	0.106	+			49599	VYGKVDSF	8	53	457.73445614914783	913.4543593650957	2	457.73504638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYGKVDSF_	ENSG00000152127|ENST00000281923|MGAT5	64.20726635412375	0.4601301477144759	1				NaN	NaN	0	NaN	5424	4256	9679
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9683	30.395	NaN	2922.8	30	0	354.65	0.034	+			43764	TLGPVTLRP	9	66	477.292662678274	952.570772423348	2	477.79437255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TLGPVTLRP_	ENST00000509460.2_1_22:25853295-25915989:+|nuORF	35.61828744233558	0.47037581924408073	1				NaN	NaN	0	NaN	5425	4256	9679
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9691	30.413	NaN	3389	30	0	444.59	0.142	+			5422	ATYILEAGK	9	55	483.26853821891217	964.5225235046244	2	483.2685852050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATYILEAGK_	ENSG00000148444|ENST00000376836|COMMD3;ENST00000463409.6_1_10:22605382-22615407:+|nuORF;ENST00000470045.1_1_10:22605346-22607030:+|nuORF;ENST00000472673.5_1_10:22606461-22607284:+|nuORF;ENST00000479958.6_1_10:22605346-22607121:+|nuORF;ENST00000483684.1_1_10:22606823-22607748:+|nuORF;ENST00000496071.5_1_10:22605382-22607284:+|nuORF;ENST00000602574.5_1_10:22605346-22607236:+|nuORF	117.5257442709337	0.022697614825424036	1				NaN	NaN	0	NaN	5430	4259	9690
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9701	30.437	NaN	3240.4	30	0	656.61	0.214	+			4061	ATDIVTGLK	9	54	459.26885619625494	916.5231594593099	2	459.2686462402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATDIVTGLK_	ENSG00000007952|ENST00000372966|NOX1;nc|ENSG00000007952|Q9Y5S8-3|NOX1	80.45461616416974	0.09558281504443908	1				NaN	NaN	0	NaN	5437	4262	9700
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9702	30.441	NaN	4540.1	30	0	489.33	0.106			+	-1	PCNMPKLAL	9	74	501.75883770545227	1001.5031224777046	2	501.7586364746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_PCNM(Oxidation (M))PKLAL_	REV__ENSG00000143374|ENST00000369064|TARS2;REV__nc|ENSG00000143374|Q9BW92-2|TARS2	60.97194046774394	0.20551255781574032	1				NaN	NaN	0	NaN	5438	4262	9700
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9703	30.443	NaN	1233.3	30	0	114.9	0.106	+			30308	PTNIIAAK	8	48	414.2526585348389	NaN	0	414.25299072265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PTNIIAAK_	ENSG00000047249|ENST00000359530|ATP6V1H;ENST00000521335.1_1_8:54745492-54754250:-|nuORF;nc|ENSG00000047249|Q9UI12-2|ATP6V1H	30.503639358989545	1.7418937515398478	1				NaN	NaN	0	NaN	5439	4262	9700
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9704	30.445	NaN	1576.6	30	0	197.59	0.036	+			8961	EFFGHIGVSP	10	60	545.2710546214554	1088.5275563097107	2	544.80712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EFFGHIGVSP_	ENST00000531360.5_1_11:118992333-119002261:+|nuORF	27.882242232435846	0.6521336255503853	1				NaN	NaN	0	NaN	5440	4262	9700
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9715	30.47	NaN	4576.1	30	0	1890.6	0.142	+			27113	MAPERVASL	9	58	487.260648033789	972.506743134378	2	487.26025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MAPERVASL_	ENSG00000158169|ENST00000289081|FANCC;FANCC|p.V449Cfs*22|1|0.07|ENSG00000158169|chr9:95107254-95107254|C/-|frameshift_variant	40.05817265558897	0.419577045485086	1				NaN	NaN	0	NaN	5448	4265	9714
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9736	30.523	NaN	3792.5	30	0	670.7	0.214	+			13985	GSCSDFQFK	9	58	538.2291980315182	1074.4438431298363	2	538.2302856445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GSC(Carbamidomethyl (C))SDFQFK_	ENSG00000124429|ENST00000262753|POF1B;nc|ENSG00000124429|Q8WVV4-1|POF1B	104.0567914643314	0.03506238181059741	1				NaN	NaN	0	NaN	5463	4271	9735
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9737	30.526	NaN	3735.8	30	0	917.01	0.106	+			35067	SAFGQAFSK	9	57	471.7374145733724	941.4602762135448	2	471.73748779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAFGQAFSK_	ENSG00000129696|ENST00000431156|TTI2	65.15724298150197	0.17062369902793603	1				NaN	NaN	0	NaN	5464	4271	9735
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9738	30.528	NaN	3554.5	30	0	1342.2	0.106	+			14013	GSFKKQRNF	9	37	371.2036795440686	1110.589209232406	3	370.87005615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GSFKKQRNF_	ENST00000392865.5_1_10:121259529-121259628:-|nuORF	24.519189625965996	0.574102787014149	1				NaN	NaN	0	NaN	5465	4271	9735
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9739	30.53	NaN	1592.4	30	0	216.27	0.106	+			30592	QAPVTDVLPD	10	60	527.7767333984375	NaN	0	527.7767333984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QAPVTDVLPD_	ENSG00000236980|ENST00000545770|C3orf84	39.252832667884924	0.37128895876774715	1				NaN	NaN	0	NaN	5466	4271	9735
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9740	30.532	NaN	813.84	30	0	93.827	0.106			+	24031	LEEVAYPLLA	10	46	559.309769751722	NaN	0	559.3099975585938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LEEVAYPLLA_	REV__ENSG00000104517|ENST00000520539|UBR5;REV__nc|ENSG00000104517|O95071-2|UBR5;REV__UBR5|p.E2121Kfs*28|1|0.39|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant;REV__UBR5|p.E2121Rfs*13|1|0.28|ENSG00000104517|chr8:102277120-102277121|-/T|frameshift_variant;REV__UBR5|p.F2571Lfs*4|2|0.31|ENSG00000104517|chr8:102262044-102262044|A/-|frameshift_variant;REV__UBR5|p.K2120Rfs*13|1|0.24|ENSG00000104517|chr8:102277121-102277122|TT/-|frameshift_variant	30.503639358989545	0.4000169810673414	1				NaN	NaN	0	NaN	5467	4271	9735
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9741	30.533	NaN	2012	30	0	176.7	0.036	+			25508	LPSPVTAQKY	10	63	552.3079102059331	1102.6012674786662	2	552.8114624023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LPSPVTAQKY_	ENSG00000167658|ENST00000309311|EEF2;ENST00000598182.5_1_19:3980752-3982305:-|nuORF	35.17822180527639	0.5925517082438457	1				NaN	NaN	0	NaN	5468	4271	9735
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9754	30.561	NaN	16431	30	0	8304.1	0.214	+			31335	QISEVVVVK	9	73	500.8051418464122	999.5957307596244	2	500.8059387207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QISEVVVVK_	ENSG00000099622|ENST00000587896|CIRBP;nc|ENSG00000099622|Q14011-2|CIRBP;nc|ENSG00000099622|Q14011|CIRBP	52.936696900407355	0.27249468807391813	1				NaN	NaN	0	NaN	5478	4274	9753
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9755	30.564	NaN	1827.7	30	0	197.84	0.106	+			39912	STMAIIVNK	9	59	488.77876092202985	975.5429689108597	2	488.7789611816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STMAIIVNK_	ENSG00000082898|ENST00000401558|XPO1;ENST00000428210.5_1_2:61705957-61719950:-|nuORF;ENST00000461407.5_1_2:61712881-61715780:-|nuORF;ENST00000492182.5_1_2:61710065-61713073:-|nuORF	87.69643885390035	0.07135982304947239	1				NaN	NaN	0	NaN	5479	4274	9753
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9756	30.566	NaN	1147.1	30	0	95.138	0.033	+			6346	AVTQIHLL	8	49	447.7744140625	NaN	0	447.7744140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVTQIHLL_	ENSG00000073350|ENST00000392550|LLGL2;ENST00000545227.6_1_17:73554011-73570984:+|nuORF;nc|ENSG00000073350|Q6P1M3-2|LLGL2;nc|ENSG00000073350|Q6P1M3-3|LLGL2	37.15910966729921	1.7418937515398478	1				NaN	NaN	0	NaN	5480	4274	9753
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9764	30.584	NaN	1871.1	30	0	1235.7	0.214			+	7577	DIKQDRRG	8	36	494.2711136948266	986.5276744564533	2	494.271240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DIKQDRRG_	REV__ENST00000563229.5_1_15:74281313-74286901:-|nuORF	23.04248740728303	0.7814162927298575	1				NaN	NaN	0	NaN	5485	4277	9763
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9765	30.588	NaN	5244.2	30	0	1315.3	0.032				-1	 	0	56	413.26291147759076	824.5112700219815	2	413.2626037597656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	5486	4277	9763
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9778	30.626	NaN	3309.9	30	0	679.24	0.214	+			6312	AVTDAIMSR	9	58	482.2496604855884	962.4847680379768	2	482.7519836425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVTDAIMSR_	ENSG00000162298|ENST00000377190|SYVN1;ENST00000449943.5_1_11:64897669-64899838:-|nuORF;nc|ENSG00000162298|Q86TM6-2|SYVN1;nc|ENSG00000162298|Q86TM6-3|SYVN1;SYVN1|p.N368Qfs*129|1|0.33|ENSG00000162298|chr11:65130663-65130664|-/G|frameshift_variant;SYVN1|p.N368Tfs*117|1|0.4|ENSG00000162298|chr11:65130664-65130664|G/-|frameshift_variant	70.8162118820467	0.13725933411854815	1				NaN	NaN	0	NaN	5493	4283	9777
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9779	30.629	NaN	1548.3	30	0	189.6	0.034			+	18704	ITEEKVSL	8	51	459.76017127717427	NaN	0	459.7596130371094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ITEEKVSL_	REV__ENSG00000173064|ENST00000682272|HECTD4;REV__HECTD4|p.A3108Gfs*4|1|0.12|ENSG00000173064|chr12:112185242-112185243|CC/-|frameshift_variant;REV__HECTD4|p.A3108Rfs*26|1|0.37|ENSG00000173064|chr12:112185242-112185242|C/-|frameshift_variant;REV__HECTD4|p.A4187Pfs*44|1|0.07|ENSG00000173064|chr12:112163201-112163201|C/-|frameshift_variant;REV__HECTD4|p.L1880Pfs*22|1|0.19|ENSG00000173064|chr12:112231674-112231675|-/TAGGA|frameshift_variant;REV__nc|ENSG00000173064|Q9Y4D8-5|HECTD4	51.33545320467046	1.7418937515398478	1				NaN	NaN	0	NaN	5494	4283	9777
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9785	30.645	NaN	2142.8	30	0	212.48	0.143	+			8219	EAEKSQLIM	9	57	524.7713126621735	NaN	0	524.770263671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EAEKSQLIM_	ENSG00000137312|ENST00000376389|FLOT1;nc|ENSG00000137312|O75955-2|FLOT1	101.60071028292904	0.0182107634719595	1				NaN	NaN	0	NaN	5497	4286	9784
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9793	30.667	NaN	3359.3	30	0	385.43	0.214	+			11906	FVAEQKVEY	9	66	556.7843591114373	1111.5541652896745	2	556.7852783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FVAEQKVEY_	ENSG00000114867|ENST00000346169|EIF4G1;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;ENST00000460829.5_1_3:184046782-184052693:+|nuORF;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1	87.69643885390035	0.07135982304947239	1				NaN	NaN	0	NaN	5502	4289	9792
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9794	30.671	NaN	3286.6	30	0	1112.6	0.106			+	10311	ETQVRQLEA	9	65	537.2824625520974	1072.5503721709947	2	537.2831420898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ETQVRQLEA_	REV__ZNF616|p.K153R|1|0.09|ENSG00000204611|chr19:52116706-52116706|T/C|missense_variant	52.936696900407355	0.27249468807391813	1				NaN	NaN	0	NaN	5503	4289	9792
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9795	30.673	NaN	1572.1	30	0	219.47	0.033	+			956	AEKAFVSV	8	46	425.73680574021	849.45905854722	2	425.7369079589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEKAFVSV_	ABCC3|p.L968Afs*31|1|0.33|ENSG00000108846|chr17:50675920-50675921|-/G|frameshift_variant;ENSG00000108846|ENST00000285238|ABCC3;ENST00000502426.5_1_17:48736553-48755440:+|nuORF;nc|ENSG00000108846|O15438-2|ABCC3;nc|ENSG00000108846|O15438-4|ABCC3	77.31757898189308	0.345924878368729	1				NaN	NaN	0	NaN	5504	4289	9792
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9805	30.696	NaN	1386.2	30	0	249.87	0.141	+			5578	AVATALGLK	9	45	422.2683622803199	842.5221716274398	2	422.2685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVATALGLK_	ENSG00000107819|ENST00000393459|SFXN3	49.44154591367651	0.3095138337212152	1				NaN	NaN	0	NaN	5511	4292	9804
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9813	30.717	NaN	6148.6	30	0	1211	0.214	+			2678	AQNPSLFVK	9	72	502.2819611612067	1002.5493693892134	2	502.2821044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AQNPSLFVK_	ENSG00000117410|ENST00000472174|ATP6V0B;nc|ENSG00000117410|Q99437-2|ATP6V0B	58.22992032128504	0.22837015374068087	1				NaN	NaN	0	NaN	5516	4295	9812
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9814	30.72	NaN	10545	30	0	2623.4	0.034			+	26943	LYGKVQEL	8	64	475.2706486778855	948.526744422571	2	475.27117919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LYGKVQEL_	REV__ENSG00000163817|ENST00000358525|SLC6A20;REV__nc|ENSG00000163817|Q9NP91-2|SLC6A20	116.90359126533652	0.23898233959989007	1				NaN	NaN	0	NaN	5517	4295	9812
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9820	30.735	NaN	3517.2	30	0	1086.4	0.214			+	40849	SVEVASSLK	9	49	460.2582972039012	918.5020414746024	2	460.2586364746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVEVASSLK_	REV__nc|ENSG00000170579|O14490-6|DLGAP1	44.377184641726394	0.36891676396732553	1				NaN	NaN	0	NaN	5520	4298	9819
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9821	30.739	NaN	1931.4	30	0	259.51	0.106	+			4420	ATIEELTEK	9	58	517.2736143512499	1032.5326757692997	2	517.2745361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATIEELTEK_	ENSG00000159140|ENST00000356577|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-4|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-7|SON;nc|ENSG00000159140|P18583-9|SON	60.11826168202944	0.21262886028301267	1				NaN	NaN	0	NaN	5521	4298	9819
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9822	30.741	NaN	1894.1	30	0	182.11	0.034	+			35791	SEAGSRIVL	9	55	466.26376742456694	NaN	0	466.2633056640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEAGSRIVL_	ENSG00000159322|ENST00000456471|ADPGK;ENST00000562621.1_1_15:73044684-73048205:-|nuORF;ENST00000567941.5_1_15:73044684-73075795:-|nuORF;ENST00000569534.5_1_15:73044684-73076051:-|nuORF;nc|ENSG00000159322|Q9BRR6-2|ADPGK;nc|ENSG00000159322|Q9BRR6-3|ADPGK;nc|ENSG00000159322|Q9BRR6-4|ADPGK	54.776311868738084	0.17377682019723872	1				NaN	NaN	0	NaN	5522	4298	9819
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9831	30.761	NaN	2157.6	30	0	731.5	0.214	+			10905	FDGRVVAK	8	51	446.2560797372939	890.4976065413878	2	446.2557067871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FDGRVVAK_	ENSG00000143183|ENST00000367881|TMCO1;nc|ENSG00000143183|Q9UM00-2|TMCO1;nc|ENSG00000143183|Q9UM00|TMCO1	90.77665401227738	0.27511901818546464	1				NaN	NaN	0	NaN	5528	4301	9830
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9832	30.764	NaN	1149.5	30	0	115	0.033	+			46002	VAVDVAVPK	9	52	449.27357607255044	896.5325992119009	2	449.2746887207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VAVDVAVPK_	ENSG00000103253|ENST00000389703|HAGHL;ENST00000561750.1_1_16:777422-778482:+|nuORF;ENST00000567696.1_1_16:777422-777680:+|nuORF;ENST00000569143.1_1_16:777422-777998:+|nuORF;nc|ENSG00000103253|Q6PII5-3|HAGHL;nc|ENSG00000103253|Q6PII5-4|HAGHL;nc|ENSG00000103253|Q6PII5|HAGHL	54.776311868738084	0.25715957988447635	1				NaN	NaN	0	NaN	5529	4301	9830
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9846	30.793	NaN	2565.6	30	0	532.96	0.214			+	21261	KLLPFGSRV	9	64	508.8159967711222	1015.6174406090444	2	508.8161315917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KLLPFGSRV_	REV__COL6A3|p.A2956Lfs*45|1|0.33|ENSG00000163359|chr2:237336234-237336234|C/-|frameshift_variant;REV__COL6A3|p.A2957Lfs*44|1|0.33|ENSG00000163359|chr2:237336232-237336232|A/-|frameshift_variant;REV__COL6A3|p.G1770Vfs*12|1|0.05|ENSG00000163359|chr2:237366878-237366879|-/TGGTGTAA|frameshift_variant;REV__COL6A3|p.G2207Efs*35|1|0.22|ENSG00000163359|chr2:237354908-237354908|G/-|frameshift_variant;REV__COL6A3|p.G3016Vfs*19|1|0.34|ENSG00000163359|chr2:237334810-237334810|G/-|frameshift_variant;REV__COL6A3|p.P2319Qfs*12|1|0.06|ENSG00000163359|chr2:237348359-237348359|G/-|frameshift_variant;REV__COL6A3|p.V1771Sfs*8|3|0.08|ENSG00000163359|chr2:237366876-237366876|C/-|frameshift_variant;REV__ENSG00000163359|ENST00000295550|COL6A3;REV__nc|ENSG00000163359|P12111-2|COL6A3;REV__nc|ENSG00000163359|P12111-3|COL6A3;REV__nc|ENSG00000163359|P12111-4|COL6A3;REV__nc|ENSG00000163359|P12111-5|COL6A3	39.252832667884924	0.4290233611298554	1				NaN	NaN	0	NaN	5540	4304	9845
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9847	30.797	NaN	1486.6	30	0	237.92	0.106			+	37300	SLCSVVPPLD	10	54	515.2675660504241	1028.520579167648	2	515.2678833007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLCSVVPPLD_	REV__ENST00000368471.7_1_1:154574987-154600365:-|nuORF;REV__ENST00000526905.1_1_1:154574987-154581231:-|nuORF	26.69291269510374	0.6618461711292317	1				NaN	NaN	0	NaN	5541	4304	9845
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9848	30.799	NaN	1020.8	30	0	92.9	0.035			+	4715	ATLYPWYP	8	56	505.7528381347656	NaN	0	505.7528381347656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATLYPWYP_	REV__ENSG00000169203|ENST00000550665|NPIPB12;REV__ENSG00000169246|ENST00000542817|NPIPB3;REV__ENSG00000183426|ENST00000328085|NPIPA1;REV__ENSG00000183793|ENST00000360151|NPIPA5;REV__ENSG00000183889|ENST00000381497|NPIPA9;REV__ENSG00000185864|ENST00000682606|NPIPB4;REV__ENSG00000198064|ENST00000697092|NPIPB13;REV__ENSG00000198156|ENST00000695563|NPIPB6;REV__ENSG00000214940|ENST00000525596|NPIPA8;REV__ENSG00000214967|ENST00000530217|NPIPA7;REV__ENSG00000224712|ENST00000531598|NPIPA3;REV__ENSG00000233024|ENST00000427999|NPIPA9;REV__ENSG00000234719|ENST00000399147|NPIPB2;REV__ENSG00000243716|ENST00000424340|NPIPB5;REV__ENSG00000254206|ENST00000698511|NPIPB11;REV__ENSG00000254852|ENST00000529166|NPIPA2;REV__nc|ENSG00000169246|Q92617-2|NPIPB3;REV__nc|ENSG00000169246|Q92617-3|NPIPB3;REV__nc|ENSG00000169246|Q92617-5|NPIPB3;REV__nc|ENSG00000169246|Q92617-6|NPIPB3;REV__nc|ENSG00000169246|Q92617|NPIPB3;REV__nc|ENSG00000243716|C9JG80|NPIPB4;REV__nc|ENSG00000254852|F8WFD2|NPIPA3	29.841539824830324	1.7418937515398478	1				NaN	NaN	0	NaN	5542	4304	9845
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9856	30.817	NaN	1210.5	30	0	185.97	0.214	+			18676	ITAKVATHL	9	48	477.292662678274	952.570772423348	2	477.2922668457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ITAKVATHL_	ENSG00000116147|ENST00000367674|TNR;nc|ENSG00000116147|Q92752-2|TNR	54.776311868738084	0.25715957988447635	1				NaN	NaN	0	NaN	5547	4307	9855
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9857	30.821	NaN	2367.1	30	0	404.64	0.106	+			35018	SACSFTFSK	9	59	517.7340659212772	1033.4535789093543	2	517.73486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SAC(Carbamidomethyl (C))SFTFSK_	ENSG00000131375|ENST00000253693|CAPN7;ENST00000443567.5_1_3:15282348-15292515:+|nuORF	61.691277971877994	0.19951612995419254	1				NaN	NaN	0	NaN	5548	4307	9855
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9858	30.823	NaN	1274.9	30	0	153.71	0.034	+			2414	APAPSTVHF	9	49	463.74006175191363	925.4655705706273	2	463.7408142089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_APAPSTVHF_	ENSG00000155090|ENST00000285407|KLF10;nc|ENSG00000155090|Q13118-2|KLF10	65.80317337860623	0.1652391959156183	1				NaN	NaN	0	NaN	5549	4307	9855
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9868	30.846	NaN	10992	30	0	1190.7	0.142			+	41955	SVVVAAGLTM	10	72	474.2650923738707	946.5156318145414	2	474.2652282714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVVVAAGLTM_	REV__ENST00000513847.5_1_X:66764886-66909456:+|nuORF;REV__nc|ENSG00000169083|P10275-4|AR	47.657333605630114	0.47858658696240314	1				NaN	NaN	0	NaN	5556	4310	9867
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9877	30.869	NaN	738.76	30	0	130.9	0.214	+			44000	TPIASAASI	9	30	415.7345074234567	NaN	0	415.7343444824219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TPIASAASI_	ENSG00000185591|ENST00000327443|SP1;nc|ENSG00000185591|P08047-2|SP1;nc|ENSG00000185591|P08047-3|SP1;SP1|p.A513V|1|0.48|ENSG00000185591|chr12:53383485-53383485|C/T|missense_variant	45.9519527083369	0.2345902329052062	1				NaN	NaN	0	NaN	5562	4313	9876
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9878	30.873	NaN	1811	30	0	502.11	0.106			+	42532	TARAVAWAAVF	11	33	388.21646375052603	NaN	0	387.8810729980469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TARAVAWAAVF_	REV__ENSG00000144407|ENST00000272847|PTH2R	32.75053402867276	0.4194607570143992	1				NaN	NaN	0	NaN	5563	4313	9876
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9879	30.875	NaN	1357.5	30	0	96.514	0.035	+			31932	QQPSNYGPM	9	52	511.2246699294987	NaN	0	511.2251281738281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QQPSNYGPM_	ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1	34.172542307311794	0.30503706118289736	1				NaN	NaN	0	NaN	5564	4313	9876
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9885	30.891	NaN	2949.7	30	0	401.52	0.214	+			3760	ATAELIMSR	9	58	496.2652296760983	990.5159064189966	2	496.2665710449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATAELIMSR_	ENSG00000105677|ENST00000222284|TMEM147;ENST00000477168.6_1_19:36036641-36037810:+|nuORF;ENST00000595467.1_1_19:36037522-36037810:+|nuORF;nc|ENSG00000105677|Q9BVK8-2|TMEM147	80.45461616416974	0.09558281504443908	1				NaN	NaN	0	NaN	5567	4316	9884
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9886	30.895	NaN	2895.1	30	0	273.38	0.035			+	18965	IVRGQRHR	8	55	511.30976508501453	1020.6049772368291	2	511.31158447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IVRGQRHR_	REV__ENSG00000205269|ENST00000379426|TMEM170B	52.29916861842294	0.578018602984656	1				NaN	NaN	0	NaN	5568	4316	9884
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9893	30.913	NaN	12580	30	0	2197.3	0.214	+			28071	NADPQAVTM	9	71	473.7182864840864	945.4220200349728	2	473.71832275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NADPQAVTM_	ENSG00000102316|ENST00000375068|MAGED2;nc|ENSG00000102316|Q9UNF1-2|MAGED2	98.58198989935565	0.04066992115528678	1				NaN	NaN	0	NaN	5572	4319	9892
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9894	30.917	NaN	3243.8	30	0	403.38	0.106			+	43867	TMFGLPTLFI	10	48	380.5434967350624	NaN	0	380.5437316894531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TMFGLPTLFI_	REV__ENSG00000262628|ENST00000575751|OR1D5	21.68575002086885	0.4201028297492154	1				NaN	NaN	0	NaN	5573	4319	9892
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9895	30.918	NaN	1864.8	30	0	611.2	0.106			+	9890	EQLLEREK	8	58	522.7875242913474	1043.5604956494947	2	522.787841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EQLLEREK_	REV__ENST00000542165.1_1_11:94704505-94704637:-|nuORF	44.377184641726394	0.6291511924298419	1				NaN	NaN	0	NaN	5574	4319	9892
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9896	30.92	NaN	1479.7	30	0	234.6	0.106	+			37682	SLSARQSASF	10	54	527.2723032015081	NaN	0	527.2717895507812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLSARQSASF_	ENSG00000167139|ENST00000300504|TBC1D21;nc|ENSG00000167139|Q8IYX1-2|TBC1D21	42.86426827375447	0.3507156137006061	1				NaN	NaN	0	NaN	5575	4319	9892
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9897	30.922	NaN	1469.9	30	0	75.169	0.034	+			35295	SAMDVAKAY	9	47	478.2314329873092	954.4483130414184	2	478.2317810058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SAMDVAKAY_	ANKEF1|p.Y712Sfs*5|1|0.07|ENSG00000132623|chr20:10054561-10054562|-/CCTGGAA|frameshift_variant;ENSG00000132623|ENST00000378392|ANKEF1	51.19269402634007	0.2889735674168909	1				NaN	NaN	0	NaN	5576	4319	9892
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9904	30.938	NaN	1059.3	30	0	140.86	0.214	+			21331	KLTYIYIQK	9	42	585.3485752290138	1168.6825975248275	2	585.3489990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KLTYIYIQK_	ENST00000383746.7_2_3:44396236-44396287:+|nuORF	36.446750945000026	0.4619375763483977	1				NaN	NaN	0	NaN	5580	4322	9903
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9905	30.942	NaN	3305.3	30	0	2332.6	0.031				-1	 	0	37	372.2014449670502	742.3883370009004	2	372.2012023925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	5581	4322	9903
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9919	30.98	NaN	1329.4	30	0	298.01	0.214			+	42507	TAPGPAILR	9	45	448.2712522932471	894.5279516532942	2	448.27166748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAPGPAILR_	REV__ENSG00000178971|ENST00000651323|CTC1;REV__ENST00000578240.1_1_17:8133610-8135926:-|nuORF;REV__nc|ENSG00000178971|Q2NKJ3-2|CTC1	51.33545320467046	0.2872990594074956	1				NaN	NaN	0	NaN	5589	4328	9918
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9920	30.983	NaN	950.25	30	0	173.33	0.106	+			26131	LSPQPVQKN	9	47	505.78448486328125	NaN	0	505.78448486328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSPQPVQKN_	ENSG00000106772|ENST00000376718|PRUNE2;nc|ENSG00000106772|Q8WUY3-2|PRUNE2;nc|ENSG00000106772|Q8WUY3-3|PRUNE2;nc|ENSG00000106772|Q8WUY3-4|PRUNE2	21.9598887501803	0.3626577482100488	1				NaN	NaN	0	NaN	5590	4328	9918
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9921	30.985	NaN	1510.7	30	0	184.34	0.106			+	11491	FPASANHADM	10	61	530.7311238356044	1059.4476947380087	2	530.7327270507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FPASANHADM_	REV__SLC10A1|p.E2D|1|0.1|ENSG00000100652|chr14:69797150-69797150|C/A|missense_variant	26.69291269510374	0.6618461711292317	1				NaN	NaN	0	NaN	5591	4328	9918
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9922	30.987	NaN	1316.7	30	0	172.12	0.035			+	8251	EAFVKNIGV	9	50	488.77651142414754	NaN	0	488.7770690917969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EAFVKNIGV_	REV__ENSG00000123191|ENST00000242839|ATP7B;REV__nc|ENSG00000123191|P35670-2|ATP7B;REV__nc|ENSG00000123191|P35670-3|ATP7B;REV__nc|ENSG00000123191|P35670-4|ATP7B	29.14955571784316	0.3303970763161698	1				NaN	NaN	0	NaN	5592	4328	9918
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9930	31.005	NaN	19535	30	0	7903.8	0.214	+			37380	SLFSSKLST	9	60	485.265960196643	968.517367460086	2	485.2660217285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLFSSKLST_	ENSG00000058804|ENST00000371429|NDC1;nc|ENSG00000058804|Q9BTX1-2|NDC1;nc|ENSG00000058804|Q9BTX1-4|NDC1;nc|ENSG00000058804|Q9BTX1-5|NDC1;nc|ENSG00000058804|Q9BTX1-6|NDC1	79.45101966838831	0.09992237243120712	1				NaN	NaN	0	NaN	5597	4331	9929
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9931	31.009	NaN	2243.4	30	0	379.69	0.106	+			7211	DAISKTYSY	9	59	524.2532014933176	1046.4918500534352	2	524.2535400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DAISKTYSY_	ENSG00000140988|ENST00000343262|RPS2;ENST00000397318.4_1_X:40794237-40794825:-|nuORF;ENST00000438210.1_1_1:40428398-40429073:+|nuORF;ENST00000441047.1_1_17:51834352-51834658:-|nuORF;ENST00000443417.1_1_9:102879039-102879699:-|nuORF;ENST00000475555.1_1_4:144270430-144270667:-|nuORF;ENST00000494359.1_1_11:17250107-17250695:+|nuORF;ENST00000529806.5_1_16:2012098-2012518:-|nuORF;ENST00000532746.5_2_16:2012101-2013785:-|nuORF;ENST00000533872.5_1_16:2012101-2013018:-|nuORF;RPL18-RPS2|1|fusion	68.84614121027924	0.14577793175421136	1				NaN	NaN	0	NaN	5598	4331	9929
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9932	31.011	NaN	2010.9	30	0	239.6	0.106			+	852	AEGTAGFVTIV	11	65	532.7846369810719	1063.5547210289437	2	532.7857666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEGTAGFVTIV_	REV__ENST00000423298.5_1_3:185677803-185689513:+|nuORF	69.6276240434122	0.23884409287757344	1				NaN	NaN	0	NaN	5599	4331	9929
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9933	31.013	NaN	1421.4	30	0	409.95	0.038			+	11580	FPNQTGVVMCP	11	50	596.7780728044021	NaN	0	596.7785034179688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FPNQTGVVMCP_	REV__ENSG00000169026|ENST00000322224|SLC49A3;REV__nc|ENSG00000169026|Q6UXD7|SLC49A3	45.97224482568171	0.34424757290527136	1				NaN	NaN	0	NaN	5600	4331	9929
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9941	31.033	NaN	8794.5	30	0	2819.8	0.214	+			4438	ATILAGDIKVK	11	58	376.9041194924961	1127.6905290776883	3	376.9043273925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATILAGDIKVK_	ENSG00000170604|ENST00000302165|IRF2BP1	58.62960593111931	0.3356877741313683	1				NaN	NaN	0	NaN	5605	4334	9940
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9942	31.036	NaN	1579.5	30	0	292.65	0.106	+			12068	GAAGRPLEL	9	49	442.2531581640339	NaN	0	442.25335693359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GAAGRPLEL_	ENSG00000120802|ENST00000556029|TMPO;nc|ENSG00000120802|P42167-2|TMPO;TMPO|p.L427Cfs*13|1|0.4|ENSG00000120802|chr12:98547767-98547767|T/-|frameshift_variant;TMPO|p.L427Ffs*18|1|0.28|ENSG00000120802|chr12:98547766-98547767|-/T|frameshift_variant;TMPO|p.R409Tfs*36|1|0.06|ENSG00000120802|chr12:98547707-98547708|-/A|frameshift_variant	54.776311868738084	0.17377682019723872	1				NaN	NaN	0	NaN	5606	4334	9940
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9943	31.038	NaN	1370.1	30	0	108.06	0.106	+			11805	FSSDVTHEM	9	54	526.7206278092838	1051.4267026853674	2	526.7216186523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FSSDVTHEM_	ENSG00000127080|ENST00000287996|IPPK	49.44154591367651	0.3095138337212152	1				NaN	NaN	0	NaN	5607	4334	9940
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9944	31.04	NaN	1606.5	30	0	111.54	0.035			+	9888	EQLHTKDK	8	64	499.7683805755073	NaN	0	499.76812744140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EQLHTKDK_	REV__CENPF|p.S2957Afs*6|1|0.52|ENSG00000117724|chr1:214657310-214657310|A/-|frameshift_variant;REV__CENPF|p.T2189Hfs*3|1|0.28|ENSG00000117724|chr1:214646131-214646131|A/-|frameshift_variant;REV__ENSG00000117724|ENST00000366955|CENPF	29.170058357718403	1.7418937515398478	1				NaN	NaN	0	NaN	5608	4334	9940
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9954	31.062	NaN	6140.6	30	0	1091.4	0.214	+			4651	ATLQEALAH	9	64	477.25590138975286	952.4972498463057	2	477.25604248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATLQEALAH_	ENSG00000137497|ENST00000393695|NUMA1;nc|ENSG00000137497|Q14980-2|NUMA1;nc|ENSG00000137497|Q14980-3|NUMA1;nc|ENSG00000137497|Q14980-4|NUMA1;NUMA1|p.K1766Rfs*2|1|0.39|ENSG00000137497|chr11:72007357-72007357|G/-|frameshift_variant;NUMA1|p.L1786Pfs*18|1|0.23|ENSG00000137497|chr11:72007295-72007296|-/G|frameshift_variant	124.08010499294276	0.018729767491916592	1				NaN	NaN	0	NaN	5615	4337	9953
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9955	31.065	NaN	885.92	30	0	234.59	0.032	+			12092	GAASGRRR	8	36	415.7384016397621	NaN	0	415.7398681640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GAASGRRR_	ENST00000599599.5_2_19:57106675-57112942:+|nuORF;REV__ENST00000441869.5_1_11:46402786-46402852:+|nuORF	8.231297230196988	1.7418937515398478	1				NaN	NaN	0	NaN	5616	4337	9953
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9963	31.084	NaN	1400.3	30	0	161.48	0.214			+	-1	MDLRPKVH	8	59	506.2717418798684	1010.5289308265368	2	506.271728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))DLRPKVH_	REV__PKHD1|p.N1016H|1|0.52|ENSG00000170927|chr6:52042910-52042910|T/G|missense_variant	30.503639358989545	0.7238069182250283	1				NaN	NaN	0	NaN	5621	4340	9962
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9964	31.087	NaN	1546.3	30	0	174.3	0.106	+			49465	VVYEFSTTK	9	57	537.2799072265625	NaN	0	537.2799072265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVYEFSTTK_	ENSG00000164151|ENST00000296564|ICE1;ICE1|p.H1965Afs*55|1|0.29|ENSG00000164151|chr5:5465219-5465220|-/A|frameshift_variant	34.172542307311794	0.30503706118289736	1				NaN	NaN	0	NaN	5622	4340	9962
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9965	31.089	NaN	1103.8	30	0	270.86	0.036			+	26210	LSSEISNIDK	10	56	553.2898559570312	NaN	0	553.2898559570312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSSEISNIDK_	REV__ENST00000512630.5_1_4:143007384-143094853:-|nuORF	35.15202426646627	0.38475398474706135	1				NaN	NaN	0	NaN	5623	4340	9962
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9976	31.113	NaN	1495.8	30	0	269.03	0.214	+			7911	DSEALHVL	8	43	442.2295319091094	NaN	0	442.2294616699219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DSEALHVL_	ENSG00000119922|ENST00000371826|IFIT2	54.76467175910256	1.7418937515398478	1				NaN	NaN	0	NaN	5631	4343	9975
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9977	31.117	NaN	955.5	30	0	112.72	0.034	+			14541	GTDVIALTK	9	47	459.2688293457031	NaN	0	459.2688293457031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTDVIALTK_	ENSG00000166275|ENST00000339834|BORCS7	46.45678178249821	0.2311111838007999	1				NaN	NaN	0	NaN	5632	4343	9975
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9985	31.136	NaN	1426.7	30	0	365.35	0.214	+			3270	ASLPGGVLK	9	46	421.26057300224926	840.5065930712985	2	421.260009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASLPGGVLK_	ENSG00000185477|ENST00000609438|GPRIN3;GPRIN3|p.Q666Afs*23|1|0.42|ENSG00000185477|chr4:89248116-89248117|-/T|frameshift_variant	49.44154591367651	0.3095138337212152	1				NaN	NaN	0	NaN	5637	4346	9984
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9986	31.14	NaN	2287.6	30	0	282.35	0.106				-1	WCADKKNAVV	10	53	595.8055620360254	NaN	0	595.8055419921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_WC(Carbamidomethyl (C))ADKKNAVV_	KIR3DL3|p.N349D|1|0.33|ENSG00000242019|chr19:54735348-54735348|A/G|missense_variant	44.377184641726394	0.34115073642966565	1				NaN	NaN	0	NaN	5638	4346	9984
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9987	31.142	NaN	922.07	30	0	98.038	0.106			+	12415	GEALGLAAVI	10	51	457.2712502866455	NaN	0	457.2710266113281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEALGLAAVI_	REV__ENSG00000169908|ENST00000305366|TM4SF1	45.9519527083369	0.331194823726099	1				NaN	NaN	0	NaN	5639	4346	9984
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9988	31.144	NaN	1622	30	0	227.39	0.106				-1	SLPTLECPI	9	56	515.2675660504241	1028.520579167648	2	515.2677612304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_SLPTLEC(Carbamidomethyl (C))PI_	FAM47C|p.P200Rfs*625|3|0.21|ENSG00000198173|chrX:37009004-37009004|C/-|frameshift_variant	24.20275056022122	0.577060078256802	1				NaN	NaN	0	NaN	5640	4346	9984
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9989	31.146	NaN	1195.5	30	0	100.78	0.035				-1	 	0	57	510.21807839965726	509.21080193305727	1	510.2178649902344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	5641	4346	9984
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10000	31.171	NaN	1472	30	0	190.81	0.214	+			26104	LSNNSISM	8	49	433.2077867597359	NaN	0	433.20806884765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSNNSISM_	ENSG00000184347|ENST00000519560|SLIT3;nc|ENSG00000184347|O75094-2|SLIT3;nc|ENSG00000184347|O75094-3|SLIT3;nc|ENSG00000184347|O75094-4|SLIT3;SLIT3|p.P1113Hfs*108|1|0.38|ENSG00000184347|chr5:168685904-168685904|G/-|frameshift_variant	66.42927471994793	1.7418937515398478	1				NaN	NaN	0	NaN	5649	4349	9999
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10001	31.174	NaN	2783.7	30	0	1341.2	0.106			+	48118	VSVDALNEI	9	50	480.25574708014335	958.4969412270867	2	480.2554016113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSVDALNEI_	REV__ENST00000416785.1_1_6:28699967-28700618:+|nuORF	53.351449002276354	0.2690372970092375	1				NaN	NaN	0	NaN	5650	4349	9999
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10002	31.176	NaN	1288.6	30	0	135.69	0.035	+			38305	SRAKSAKGVL	10	57	508.81610107421875	NaN	0	508.81610107421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SRAKSAKGVL_	ENSG00000166845|ENST00000620105|C18orf54;nc|ENSG00000166845|Q8IYD9|LAS2	28.081489160057373	0.40797012399963245	1				NaN	NaN	0	NaN	5651	4349	9999
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10009	31.194	NaN	4975.9	30	0	546.81	0.214	+			16107	HDLVIKSL	8	62	462.7791737580894	923.5437945829789	2	462.7792663574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HDLVIKSL_	ENSG00000100342|ENST00000397278|APOL1;nc|ENSG00000100342|O14791-2|APOL1;nc|ENSG00000100342|O14791-3|APOL1	131.03138772384656	0.22501736558723914	1				NaN	NaN	0	NaN	5655	4352	10008
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10010	31.198	NaN	4107.5	30	0	1545.7	0.106				-1	 	0	46	336.19111288230357	670.3676728314072	2	336.1910095214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	5656	4352	10008
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10011	31.2	NaN	3537.8	30	0	576.46	0.035	+			47935	VSMDYAISK	9	66	507.2520683860788	1012.4895838389576	2	507.25286865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSMDYAISK_	ENSG00000196453|ENST00000247930|ZNF777;ZNF777|p.P504Rfs*5|1|0.44|ENSG00000196453|chr7:149432761-149432761|G/-|frameshift_variant	104.01359247289065	0.03510646158778409	1				NaN	NaN	0	NaN	5657	4352	10008
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10019	31.219	NaN	967.91	30	0	92.273	0.142	+			6855	CKPFNPVL	8	48	459.2501743981086	916.4857958630172	2	459.25054931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CKPFNPVL_	ENSG00000006025|ENST00000007414|OSBPL7;ENST00000579728.5_1_17:45885659-45892067:-|nuORF;ENST00000583167.5_1_17:45885659-45892067:-|nuORF	42.47446043378293	0.6409579893742323	1				NaN	NaN	0	NaN	5662	4355	10018
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10029	31.244	NaN	5706.5	30	0	575.86	0.214	+			46373	VELAESRAL	9	68	494.2775914591781	986.5406299851562	2	494.2772216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VELAESRAL_	ENST00000340533.8_2_18:71959085-71959217:-|nuORF	76.16968421966216	0.11411088698345859	1				NaN	NaN	0	NaN	5669	4358	10028
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10030	31.247	NaN	2819.3	30	0	678.13	0.106	+			44962	TVCDLIQSK	9	52	532.2763656998343	1062.5381784664685	2	532.2769165039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_TVC(Carbamidomethyl (C))DLIQSK_	ENSG00000030582|ENST00000053867|GRN;ENST00000585348.1_1_17:42428425-42428671:+|nuORF;nc|ENSG00000030582|P28799-2|GRN	96.0336014099291	0.047854655524928534	1				NaN	NaN	0	NaN	5670	4358	10028
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10031	31.249	NaN	2371.1	30	0	228.36	0.106			+	-1	DIVKCQRL	8	62	516.2855732353296	1030.556593537459	2	516.2847900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_DIVKC(Carbamidomethyl (C))QRL_	REV__CARD11|p.R555Gfs*45|6|0.44|ENSG00000198286|chr7:2928689-2928689|G/-|frameshift_variant;REV__ENSG00000198286|ENST00000396946|CARD11	57.81127852772723	0.5234495074909924	1				NaN	NaN	0	NaN	5671	4358	10028
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10032	31.251	NaN	1367	30	0	287.9	0.106	+			38536	SSDSGSGFWK	10	51	529.2335070339083	NaN	0	529.2332763671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSDSGSGFWK_	ENSG00000126709|ENST00000361157|IFI6;nc|ENSG00000126709|P09912-2|IFI6;nc|ENSG00000126709|P09912-3|IFI6	98.58198989935565	0.02140828941662603	1				NaN	NaN	0	NaN	5672	4358	10028
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10033	31.253	NaN	877.76	30	0	140.96	0.033	+			25469	LPRDAAGAE	9	45	450.2339782714844	NaN	0	450.2339782714844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LPRDAAGAE_	ENST00000371276.8_2_1:55252675-55252738:-|nuORF	20.94693142431847	0.3660861156085067	1				NaN	NaN	0	NaN	5673	4358	10028
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10040	31.269	NaN	1640.8	30	0	203.86	0.143	+			22029	KSIDFPLTK	9	50	524.8053740352528	1047.5961951373056	2	524.8055419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSIDFPLTK_	ENSG00000084073|ENST00000372759|ZMPSTE24	65.15724298150197	0.17062369902793603	1				NaN	NaN	0	NaN	5677	4361	10039
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10046	31.287	NaN	4022.8	30	0	2166.6	0.214	+			41664	SVRLNYGI	8	51	461.26097085564874	920.5073887780975	2	461.2611999511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVRLNYGI_	ENSG00000173801|ENST00000393931|JUP;ENST00000585793.1_1_17:39914605-39919321:-|nuORF	37.15910966729921	0.6739408393984688	1				NaN	NaN	0	NaN	5680	4364	10045
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10047	31.291	NaN	3854.1	30	0	816.26	0.106	+			4250	ATGDVALLR	9	56	458.2662658701507	914.5179788071014	2	458.2666931152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATGDVALLR_	ENSG00000100605|ENST00000267615|ITPK1	115.49404669440601	0.023927554121326553	1				NaN	NaN	0	NaN	5681	4364	10045
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10048	31.293	NaN	2405.5	30	0	642.35	0.106	+			48933	VVEGSFVYK	9	62	514.2765876918329	1026.5386224504657	2	514.277587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVEGSFVYK_	ENSG00000203879|ENST00000447750|GDI1;ENST00000491154.1_1_X:153666748-153668487:+|nuORF;GDI1|p.G114D|1|0.12|ENSG00000203879|chrX:154439093-154439093|G/A|missense_variant	54.776311868738084	0.25715957988447635	1				NaN	NaN	0	NaN	5682	4364	10045
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10049	31.295	NaN	1446.3	30	0	135.44	0.035			+	27621	MPPVVVYLN	9	56	516.2855732353296	1030.556593537459	2	516.79052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MPPVVVYLN_	REV__ENSG00000176787|ENST00000321522|OR52E2	40.5726180659479	0.4135428067754104	1				NaN	NaN	0	NaN	5683	4364	10045
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10055	31.309	NaN	3748.4	30	0	502.2	0.143			+	7095	CVVIWVLP	8	67	493.27964941202595	984.5447458908519	2	493.78167724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_C(Carbamidomethyl (C))VVIWVLP_	REV__ABCC6|p.L780Wfs*31|1|0.44|ENSG00000091262|chr16:16178875-16178875|G/-|frameshift_variant;REV__ENSG00000091262|ENST00000205557|ABCC6;REV__ENST00000574094.5_1_16:16275679-16317348:-|nuORF;REV__nc|ENSG00000091262|O95255-3|ABCC6	67.3271909547111	0.42924334279516513	1				NaN	NaN	0	NaN	5686	4367	10054
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10064	31.333	NaN	1280.5	30	0	546.3	0.214	+			29835	PLADDVTP	8	41	414.2105120326735	826.406471132147	2	414.2107849121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PLADDVTP_	ENSG00000263761|ENST00000581492|GDF2	35.200714571348534	0.6875396545722289	1				NaN	NaN	0	NaN	5692	4370	10063
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10065	31.337	NaN	21920	30	0	12967	0.106				-1	 	0	48	367.1973911469211	1098.5703440409634	3	367.197509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	5693	4370	10063
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10066	31.339	NaN	3017.5	30	0	712.15	0.106			+	14434	GTATLYKLS	9	63	477.26848465214346	952.5224163710869	2	477.268310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTATLYKLS_	REV__ENST00000507036.1_1_5:7867877-7868021:-|nuORF	56.43379154798735	0.2433427591689151	1				NaN	NaN	0	NaN	5694	4370	10063
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10067	31.34	NaN	3085.2	30	0	290.54	0.106	+			35133	SAIAAVIAR	9	56	436.2712670558406	870.5279811784812	2	436.2707214355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SAIAAVIAR_	ENSG00000165949|ENST00000612813|IFI27;nc|ENSG00000165949|P40305-1|IFI27;nc|ENSG00000165949|P40305-3|IFI27;nc|ENSG00000165949|P40305-4|IFI27	98.62937762414208	0.04060045538121712	1				NaN	NaN	0	NaN	5695	4370	10063
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10068	31.342	NaN	935.9	30	0	77.452	0.106			+	11094	FFEEGPAKY	9	46	544.2573872502978	NaN	0	544.2567138671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FFEEGPAKY_	REV__ENSG00000161036|ENST00000292616|LRWD1;REV__LRWD1|p.L446Cfs*61|1|0.2|ENSG00000161036|chr7:102469772-102469772|C/-|frameshift_variant;REV__LRWD1|p.V387Sfs*120|1|0.37|ENSG00000161036|chr7:102468990-102468990|G/-|frameshift_variant	25.57405402267927	0.3484490411150625	1				NaN	NaN	0	NaN	5696	4370	10063
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10069	31.344	NaN	977.81	30	0	83.283	0.033			+	-1	LSQLLCLG	8	45	452.2536561085823	NaN	0	452.25537109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_LSQLLC(Carbamidomethyl (C))LG_	REV__ENST00000494150.1_1_22:39478019-39478325:+|nuORF	60.97194046774394	1.7418937515398478	1				NaN	NaN	0	NaN	5697	4370	10063
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10078	31.365	NaN	1808.6	30	0	350.08	0.214			+	42267	TAAVKELLAG	10	53	486.79014047033615	971.5657280074723	2	486.7896423339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAAVKELLAG_	REV__ENSG00000204479|ENST00000376098|PRAMEF17;REV__ENSG00000237700|ENST00000437300|PRAMEF33;REV__PRAMEF17|p.E417Gfs*22|1|0.04|ENSG00000204479|chr1:13392324-13392325|-/AG|frameshift_variant;REV__PRAMEF17|p.T389Afs*9|1|0.05|ENSG00000204479|chr1:13392241-13392242|-/GCTTGGGT|frameshift_variant	69.6276240434122	0.2803623802747859	1				NaN	NaN	0	NaN	5703	4373	10077
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10079	31.369	NaN	3229	30	0	400.63	0.106	+			45473	TYDKGYQF	8	68	511.2344893824072	1020.4544258316145	2	511.7362060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TYDKGYQF_	ENSG00000139197|ENST00000675855|PEX5;nc|ENSG00000139197|P50542-2|PEX5;nc|ENSG00000139197|P50542-3|PEX5;nc|ENSG00000139197|P50542-4|PEX5	49.44154591367651	0.597725784090933	1				NaN	NaN	0	NaN	5704	4373	10077
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10080	31.371	NaN	1892	30	0	188.8	0.106			+	-1	CIAQTRTILQ	10	61	602.3313272701237	1202.6481016070472	2	602.8330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_C(Carbamidomethyl (C))IAQTRTILQ_	REV__ENSG00000264424|ENST00000255381|MYH4;REV__MYH4|p.N981Tfs*16|1|0.12|ENSG00000264424|chr17:10453321-10453321|T/-|frameshift_variant	82.7504851949679	0.1731497355276012	1				NaN	NaN	0	NaN	5705	4373	10077
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10081	31.373	NaN	651.51	30	0	44.771	0.033			+	17966	IGVARLNL	8	42	428.27404983925504	854.5335467453101	2	428.2740173339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IGVARLNL_	REV__CON__ENSEMBL:ENSBTAP00000007350	54.76467175910256	0.5536104764165384	1				NaN	NaN	0	NaN	5706	4373	10077
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10086	31.387	NaN	1253	30	0	104.1	0.214	+			37319	SLDSRLSPPAG	11	60	550.2933872196785	NaN	0	550.2930908203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLDSRLSPPAG_	ENSG00000126561|ENST00000590949|STAT5A;nc|ENSG00000126561|P42229-2|STAT5A	42.86426827375447	0.36657022113551535	1				NaN	NaN	0	NaN	5708	4376	10085
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10087	31.391	NaN	2642.2	30	0	507.75	0.106			+	39158	SSVSAVAVVL	10	49	466.276289423422	930.538025913644	2	466.27642822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSVSAVAVVL_	REV__PCDHB12|p.L694V|1|0.14|ENSG00000120328|chr5:141210987-141210987|T/G|missense_variant	45.9519527083369	0.4943008177357963	1				NaN	NaN	0	NaN	5709	4376	10085
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10088	31.393	NaN	1634.8	30	0	235.07	0.106			+	47136	VLPQCCIAY	9	60	505.244997015774	1008.475441098348	2	505.2456970214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VLPQCCIAY_	REV__ENSG00000164270|ENST00000377888|HTR4;REV__nc|ENSG00000164270|Q13639-2|HTR4;REV__nc|ENSG00000164270|Q13639-3|HTR4;REV__nc|ENSG00000164270|Q13639-4|HTR4;REV__nc|ENSG00000164270|Q13639-5|HTR4;REV__nc|ENSG00000164270|Q13639-6|HTR4;REV__nc|ENSG00000164270|Q13639-7|HTR4;REV__nc|ENSG00000164270|Q13639-8|HTR4;REV__nc|ENSG00000164270|Q13639-9|HTR4	83.28718786952967	0.08379093283639245	1				NaN	NaN	0	NaN	5710	4376	10085
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10089	31.394	NaN	961.2	30	0	508.02	0.031				-1	 	0	34	350.20663377397454	698.3987146147491	2	350.2062683105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	5711	4376	10085
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10100	31.42	NaN	1483.5	30	0	629.81	0.14	+			48706	VTTPPPLV	8	39	412.24938368746626	822.4842144417325	2	412.2496032714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTTPPPLV_	ENSG00000167491|ENST00000683918|GATAD2A;GATAD2A|p.P366Tfs*74|1|0.48|ENSG00000167491|chr19:19498606-19498607|-/C|frameshift_variant;GATAD2A|p.R273Gfs*42|1|0.27|ENSG00000167491|chr19:19496107-19496107|C/-|frameshift_variant;nc|ENSG00000167491|Q86YP4-2|GATAD2A;nc|ENSG00000167491|Q86YP4|GATAD2A	33.51558372728122	0.7005509609380386	1				NaN	NaN	0	NaN	5719	4379	10099
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10106	31.438	NaN	1819.1	30	0	682.21	0.214	+			40488	STYFERCLK	9	38	382.8583945938673	NaN	0	382.85845947265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STYFERCLK_	ENSG00000130725|ENST00000253023|UBE2M	25.57405402267927	0.3484490411150625	1				NaN	NaN	0	NaN	5722	4382	10105
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10107	31.441	NaN	1170.9	30	0	129.64	0.035	+			26126	LSPLSLAQY	9	56	496.27676683022946	NaN	0	496.2765197753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSPLSLAQY_	ENSG00000134013|ENST00000389131|LOXL2;LOXL2|p.K759Sfs*9|1|0.3|ENSG00000134013|chr8:23298092-23298092|T/-|frameshift_variant	54.776311868738084	0.17377682019723872	1				NaN	NaN	0	NaN	5723	4382	10105
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10120	31.479	NaN	8793.7	30	0	1649.9	0.214	+			18812	ITVGDIGPK	9	65	450.2631924850365	898.511832036873	2	450.2633056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ITVGDIGPK_	ACOX1|p.N501Tfs*6|1|0.47|ENSG00000161533|chr17:75949577-75949577|T/-|frameshift_variant;ENSG00000161533|ENST00000293217|ACOX1;nc|ENSG00000161533|Q15067-3|ACOX1;nc|ENSG00000161533|Q15067|ACOX1	72.87924865735499	0.12833875048249987	1				NaN	NaN	0	NaN	5730	4388	10119
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10121	31.483	NaN	1047.1	30	0	47.225	0.106			+	-1	CGAAVSMSRQ	10	53	533.7406815899366	NaN	0	533.73974609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_C(Carbamidomethyl (C))GAAVSMSRQ_	REV__ENSG00000090975|ENST00000320201|PITPNM2;REV__nc|ENSG00000090975|Q9BZ72-2|PITPNM2;REV__nc|ENSG00000090975|Q9BZ72-3|PITPNM2	29.170058357718403	0.40439580130713204	1				NaN	NaN	0	NaN	5731	4388	10119
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10122	31.485	NaN	1273.4	30	0	129.48	0.035				-1	TLALQCAMK	9	52	518.2704128562906	NaN	0	518.2708129882812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_TLALQC(Carbamidomethyl (C))AMK_	ENSG00000130449|ENST00000252744|ZSWIM6;ENSG00000132003|ENST00000590508|ZSWIM4;ENSG00000162415|ENST00000359600|ZSWIM5;nc|ENSG00000132003|Q9H7M6|ZSWIM4;ZSWIM6|p.R981Q|1|0.4|ENSG00000130449|chr5:61543611-61543611|G/A|missense_variant	40.77816245573522	0.2702456086868081	1				NaN	NaN	0	NaN	5732	4388	10119
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10130	31.504	NaN	1009.6	30	0	122.6	0.214	+			441	AAVGKSSFL	9	44	440.24991089623427	NaN	0	440.2496643066406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAVGKSSFL_	ENSG00000165105|ENST00000376447|RASEF	54.776311868738084	0.17377682019723872	1				NaN	NaN	0	NaN	5737	4391	10129
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10131	31.508	NaN	2473	30	0	397.71	0.034			+	8200	EADEGFFR	8	59	485.7166758875829	969.4187988419658	2	485.71649169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EADEGFFR_	REV__ENSG00000113318|ENST00000265081|MSH3;REV__MSH3|p.N1020Ifs*40|1|0.46|ENSG00000113318|chr5:80864865-80864865|A/-|frameshift_variant;REV__MSH3|p.N1020Kfs*17|1|0.43|ENSG00000113318|chr5:80864864-80864865|-/A|frameshift_variant;REV__MSH3|p.N861Mfs*6|1|0.43|ENSG00000113318|chr5:80792766-80792766|A/-|frameshift_variant;REV__MSH3|p.V745Ifs*28|1|0.05|ENSG00000113318|chr5:80768981-80768982|-/CATATTCGAAGTTTAT|frameshift_variant	45.9519527083369	0.6193794311207887	1				NaN	NaN	0	NaN	5738	4391	10129
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10139	31.528	NaN	1533.1	30	0	381.41	0.214	+			40457	STVRGFYK	8	53	479.2606510824827	956.5067492317654	2	479.2604064941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STVRGFYK_	tr|U7T8G3|U7T8G3_FUSNUCore-binding(CB)domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00045PE=4SV=1	25.450171626174864	0.7628259754767981	1				NaN	NaN	0	NaN	5743	4394	10138
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10140	31.531	NaN	1377.5	30	0	286.09	0.035				-1	HSQIPKCQ	8	48	499.24591077271026	NaN	0	499.2462158203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_HSQIPKC(Carbamidomethyl (C))Q_	ENST00000295324.3_1_2:37873702-37873852:-|nuORF	38.80614096846853	1.7418937515398478	1				NaN	NaN	0	NaN	5744	4394	10138
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10148	31.55	NaN	2394.6	30	0	283.9	0.214	+			3857	ATAMGAFVR	9	57	462.2415752860139	922.4685976388279	2	462.24188232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATAMGAFVR_	ENSG00000205138|ENST00000378887|SDHAF1	101.60071028292904	0.0375685401170269	1				NaN	NaN	0	NaN	5749	4397	10147
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10149	31.553	NaN	1439.4	30	0	267.86	0.036			+	11618	FPVNTYLPR	9	45	553.8048858158947	NaN	0	553.8050537109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FPVNTYLPR_	REV__ENSG00000159363|ENST00000326735|ATP13A2;REV__nc|ENSG00000159363|Q9NQ11-3|ATP13A2	23.52269567125451	0.3573684076213556	1				NaN	NaN	0	NaN	5750	4397	10147
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10159	31.577	NaN	9247.3	30	0	1899.5	0.214				-1	 	0	58	382.5604927209259	1144.6596487629777	3	382.5604553222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	5757	4400	10158
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10160	31.581	NaN	1065.1	30	0	136.67	0.106	+			27559	MPEPDAQRF	9	52	545.7529173998831	NaN	0	545.754150390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MPEPDAQRF_	CHEK1|p.I234Nfs*11|1|0.24|ENSG00000149554|chr11:125635508-125635509|-/A|frameshift_variant;ENSG00000149554|ENST00000438015|CHEK1;nc|ENSG00000149554|O14757-2|CHEK1;nc|ENSG00000149554|O14757-3|CHEK1	42.396135135203025	0.2590952873412954	1				NaN	NaN	0	NaN	5758	4400	10158
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10161	31.582	NaN	1422.7	30	0	102.37	0.106	+			34801	RYLEKPMEI	9	60	589.8161517260489	NaN	0	589.8152465820312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RYLEKPMEI_	ENSG00000168610|ENST00000264657|STAT3;nc|ENSG00000168610|P40763-2|STAT3;nc|ENSG00000168610|P40763-3|STAT3;STAT3|p.R729Afs*3|2|0.33|ENSG00000168610|chr17:42316861-42316861|G/-|frameshift_variant	30.317721548370564	0.32449924987115025	1				NaN	NaN	0	NaN	5759	4400	10158
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10162	31.584	NaN	3617.1	30	0	848.56	0.034	+			48961	VVGAVVFQK	9	65	473.78936612942044	945.5641793256409	2	473.78857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVGAVVFQK_	ENSG00000169223|ENST00000303127|LMAN2;ENST00000504071.1_1_5:176759089-176761465:-|nuORF;ENST00000515209.5_1_5:176759089-176761331:-|nuORF	85.35947970620816	0.07794846947388434	1				NaN	NaN	0	NaN	5760	4400	10158
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10171	31.606	NaN	11670	30	0	976.2	0.214	+			40652	SVAQVVLSR	9	72	479.7874484725637	957.5603440119274	2	479.7872314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVAQVVLSR_	ENSG00000165272|ENST00000297991|AQP3;ENST00000463983.5_1_9:33443205-33447528:-|nuORF;ENST00000493581.1_1_9:33443725-33447528:-|nuORF;nc|ENSG00000165272|Q92482-2|AQP3	112.2953585152457	0.026655838328212944	1				NaN	NaN	0	NaN	5766	4403	10170
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10172	31.609	NaN	1731.3	30	0	169.69	0.106				-1	LCVYVWQI	8	65	540.7826689671588	NaN	0	540.7828369140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LC(Carbamidomethyl (C))VYVWQI_	ENST00000290551.4_1_1:203277319-203277361:+|nuORF	44.53106598305862	1.7418937515398478	1				NaN	NaN	0	NaN	5767	4403	10170
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10173	31.611	NaN	2535.4	30	0	575.53	0.034			+	19115	IYLAGTSTI	9	52	469.7630269065485	937.511500879897	2	469.7630310058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IYLAGTSTI_	REV__DSCAM|p.F216Lfs*44|1|0.19|ENSG00000171587|chr21:40369106-40369106|A/-|frameshift_variant;REV__DSCAM|p.G1997Afs*3|1|0.1|ENSG00000171587|chr21:40013083-40013083|C/-|frameshift_variant;REV__DSCAM|p.P886Qfs*57|1|0.25|ENSG00000171587|chr21:40187253-40187253|G/-|frameshift_variant;REV__ENSG00000171587|ENST00000400454|DSCAM;REV__nc|ENSG00000171587|O60469-2|DSCAM	28.2542754592877	0.5391964248700117	1				NaN	NaN	0	NaN	5768	4403	10170
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10179	31.627	NaN	1633.1	30	0	199.58	0.214			+	43736	TLAILSSKY	9	53	498.2920420132381	994.5695310932762	2	498.2917785644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TLAILSSKY_	REV__ENSG00000115827|ENST00000375255|DCAF17;REV__ENST00000468592.5_1_2:172300063-172325523:+|nuORF;REV__ENST00000480855.1_1_2:172299988-172306494:+|nuORF	34.172542307311794	0.4838870758800184	1				NaN	NaN	0	NaN	5771	4406	10178
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10180	31.631	NaN	875.25	30	0	56.118	0.037	+			10868	FAVFIFMTY	9	53	569.7855893211001	NaN	0	569.7852172851562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FAVFIFMTY_	CD274|p.K271Hfs*3|1|0.06|ENSG00000120217|chr9:5466789-5466790|-/CATTTGT|frameshift_variant;ENSG00000120217|ENST00000381577|CD274;nc|ENSG00000120217|Q9NZQ7-2|CD274;nc|ENSG00000120217|Q9NZQ7-3|CD274;nc|ENSG00000120217|Q9NZQ7-4|CD274	31.954861631926434	0.3162336699109506	1				NaN	NaN	0	NaN	5772	4406	10178
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10188	31.661	NaN	2624	30	0	298.63	0.214	+			12662	GEITGEVHM	9	59	486.72606548700634	971.4375780408127	2	486.7257385253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEITGEVHM_	ENSG00000136068|ENST00000295956|FLNB;ENST00000481470.5_1_3:58118395-58154450:+|nuORF;nc|ENSG00000136068|O75369-2|FLNB;nc|ENSG00000136068|O75369-3|FLNB;nc|ENSG00000136068|O75369-4|FLNB;nc|ENSG00000136068|O75369-5|FLNB;nc|ENSG00000136068|O75369-6|FLNB;nc|ENSG00000136068|O75369-7|FLNB;nc|ENSG00000136068|O75369-8|FLNB;nc|ENSG00000136068|O75369-9|FLNB	99.37495909608758	0.03983967222258828	1				NaN	NaN	0	NaN	5774	4412	10187
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10189	31.665	NaN	1270.8	30	0	209.79	0.106	+			35470	SATETCYTY	9	52	548.2180113840483	1094.4214698348965	2	548.2180786132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SATETC(Carbamidomethyl (C))YTY_	ENSG00000132465|ENST00000254801|JCHAIN	60.97194046774394	0.20551255781574032	1				NaN	NaN	0	NaN	5775	4412	10187
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10190	31.667	NaN	1352.5	30	0	422.1	0.037			+	-1	MGLESAMSVSP	11	49	570.7480900653143	1139.4816271974285	2	570.7500610351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Oxidation (M)	_M(Oxidation (M))GLESAM(Oxidation (M))SVSP_	REV__tr|U7SLW4|U7SLW4_FUSNUAutotransporterdomain-containingprotein(Fragment)OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01912PE=4SV=1	26.69291269510374	0.70980431218767	1				NaN	NaN	0	NaN	5776	4412	10187
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10195	31.681	NaN	2317.9	30	0	809.09	0.145				-1	 	0	32	367.1973911469211	1098.5703440409634	3	367.19757080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	5778	4415	10194
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10205	31.707	NaN	1150.5	30	0	151.29	0.142	+			11152	FGISSVPTK	9	48	468.26301006137186	NaN	0	468.2631530761719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FGISSVPTK_	ENSG00000205323|ENST00000336133|SARNP;ENST00000552207.1_1_12:56188062-56211500:-|nuORF	56.43379154798735	0.16452882468284893	1				NaN	NaN	0	NaN	5785	4418	10204
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10211	31.725	NaN	12721	30	0	2085.7	0.214	+			42814	TEARFGAQL	9	66	496.76126421353047	991.507975493861	2	496.7613525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEARFGAQL_	CON__P08727;ENSG00000171345|ENST00000361566|KRT19	106.68306549817024	0.032382560583716295	1				NaN	NaN	0	NaN	5788	4421	10210
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10212	31.729	NaN	2650.7	30	0	1114.1	0.106			+	-1	RSQYEQDGM	9	43	586.2375086051122	1170.4604642770244	2	586.2396850585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))RSQYEQDGM(Oxidation (M))_	REV__ENSG00000101115|ENST00000217086|SALL4;REV__SALL4|p.S765A|1|0.34|ENSG00000101115|chr20:51790190-51790190|A/C|missense_variant	29.14955571784316	0.5308295550522326	1				NaN	NaN	0	NaN	5789	4421	10210
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10213	31.731	NaN	1883.4	30	0	238.1	0.106			+	1228	AEQVKPEELG	10	66	550.2879722552123	NaN	0	550.287353515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEQVKPEELG_	REV__ENSG00000189325|ENST00000437635|BNIP5	47.657333605630114	0.3204131577145918	1				NaN	NaN	0	NaN	5790	4421	10210
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10214	31.732	NaN	1546.7	30	0	89.924	0.035	+			38603	SSGNTYFVF	9	56	511.2344893824072	1020.4544258316145	2	511.23443603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSGNTYFVF_	CCDC180|p.K1351Sfs*28|1|0.14|ENSG00000197816|chr9:97364063-97364063|C/-|frameshift_variant;CCDC180|p.K1583Nfs*17|3|0.32|ENSG00000197816|chr9:97374551-97374551|C/-|frameshift_variant;CCDC180|p.S1054Lfs*19|1|0.44|ENSG00000197816|chr9:97354591-97354591|T/-|frameshift_variant;ENSG00000197816|ENST00000529487|CCDC180;ENST00000375206.6_1_9:100053158-100139173:+|nuORF;ENST00000460482.6_1_9:100070037-100107975:+|nuORF;ENST00000494917.6_1_9:100069637-100105846:+|nuORF;ENST00000529787.2_1_9:100092438-100109914:+|nuORF;nc|ENSG00000197816|Q9P1Z9|CCDC180	27.882242232435846	0.5426732730940306	1				NaN	NaN	0	NaN	5791	4421	10210
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10219	31.747	NaN	5329.4	30	0	690.16	0.214	+			40800	SVDTVAVGLV	10	66	480.27352915538387	958.5325053775678	2	480.27337646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVDTVAVGLV_	ENSG00000008710|ENST00000262304|PKD1;ENST00000471603.6_1_16:2149506-2153410:-|nuORF;ENST00000480227.5_1_16:2149506-2153780:-|nuORF;ENST00000532739.1_1_16:16465196-16470832:+|nuORF;ENST00000537112.5_1_16:16421763-16427707:+|nuORF;ENST00000541836.5_1_16:15021147-15029115:+|nuORF;ENST00000570193.5_1_16:2149492-2150290:-|nuORF;nc|ENSG00000008710|P98161-2|PKD1;nc|ENSG00000008710|P98161-3|PKD1	55.50420428727701	0.4067289358710215	1				NaN	NaN	0	NaN	5793	4424	10218
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10220	31.75	NaN	1753.1	30	0	153.16	0.106			+	-1	KTLGADDQ	8	48	445.21678626352747	888.419019593855	2	445.21673583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))KTLGADDQ_	REV__ENST00000523648.5_1_5:163781227-163919838:+|nuORF	29.14955571784316	0.7342621283720113	1				NaN	NaN	0	NaN	5794	4424	10218
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10221	31.752	NaN	1500.5	30	0	209.58	0.037				-1	VMGPPMLQEI	10	44	565.7853080017535	NaN	0	565.7842407226562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_VM(Oxidation (M))GPPMLQEI_	ENSG00000243749|ENST00000373337|TMEM35B	34.172542307311794	0.38797011891751465	1				NaN	NaN	0	NaN	5795	4424	10218
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10232	31.786	NaN	2987.7	30	0	741.27	0.214	+			38075	SPSSVSNTF	9	50	463.21645209274254	924.4183512522851	2	463.2165222167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SPSSVSNTF_	ENSG00000145113|ENST00000463781|MUC4;MUC4|p.L3985Ffs*274|1|0.3|ENSG00000145113|chr3:195779627-195779627|G/-|frameshift_variant;MUC4|p.N4902Tfs*8|1|0.37|ENSG00000145113|chr3:195761027-195761027|T/-|frameshift_variant;nc|ENSG00000145113|Q99102-10|MUC4;nc|ENSG00000145113|Q99102-11|MUC4;nc|ENSG00000145113|Q99102-15|MUC4;nc|ENSG00000145113|Q99102-16|MUC4;nc|ENSG00000145113|Q99102-17|MUC4;nc|ENSG00000145113|Q99102-2|MUC4;nc|ENSG00000145113|Q99102-3|MUC4;nc|ENSG00000145113|Q99102-5|MUC4;nc|ENSG00000145113|Q99102-7|MUC4;nc|ENSG00000145113|Q99102-8|MUC4;nc|ENSG00000145113|Q99102-9|MUC4	77.31757898189308	0.1091473830098891	1				NaN	NaN	0	NaN	5800	4430	10231
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10233	31.79	NaN	271.38	30	0	46.934	0.031			+	35416	SARARHEPL	9	16	346.1924781911716	NaN	0	346.19219970703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SARARHEPL_	REV__ENST00000330714.7_1_21:42751998-42754376:+|nuORF	14.864876125193954	0.3866709117995958	1				NaN	NaN	0	NaN	5801	4430	10231
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10238	31.804	NaN	1653.8	30	0	195.46	0.214	+			30225	PSSPASSQF	9	54	454.21132055354104	906.4080881738821	2	454.2109680175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PSSPASSQF_	BRD8|p.P1065Lfs*29|1|0.14|ENSG00000112983|chr5:138149724-138149724|G/-|frameshift_variant;ENSG00000112983|ENST00000254900|BRD8;nc|ENSG00000112983|Q9H0E9-2|BRD8;nc|ENSG00000112983|Q9H0E9-3|BRD8;nc|ENSG00000112983|Q9H0E9-4|BRD8	49.44154591367651	0.3095138337212152	1				NaN	NaN	0	NaN	5803	4433	10237
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10239	31.808	NaN	1463.2	30	0	242.45	0.106			+	-1	AIGYNLLPRM	10	35	388.5467378057975	NaN	0	388.5479736328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_AIGYNLLPRM(Oxidation (M))_	REV__ENSG00000151413|ENST00000281081|NUBPL;REV__ENST00000548937.5_1_14:32030645-32172346:+|nuORF;REV__nc|ENSG00000151413|Q8TB37-2|NUBPL	30.317721548370564	0.4006274431774794	1				NaN	NaN	0	NaN	5804	4433	10237
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10240	31.81	NaN	1772.8	30	0	865.27	0.106	+			46987	VKPKFEKK	8	48	502.31860273576547	1002.622652538331	2	502.3182067871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VKPKFEKK_	ENSG00000138646|ENST00000264350|HERC5;ENST00000502913.1_1_4:89394186-89425581:+|nuORF;ENST00000510223.5_1_4:89394995-89425581:+|nuORF	30.317721548370564	0.7252424349988982	1				NaN	NaN	0	NaN	5805	4433	10237
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10241	31.811	NaN	1064.1	30	0	96.971	0.106	+			21338	KLVPALPGSAP	11	54	525.3218072131735	NaN	0	525.3212280273438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KLVPALPGSAP_	ENST00000216780.8_1_14:24563387-24566117:+|nuORF	30.317721548370564	0.4303027717346894	1				NaN	NaN	0	NaN	5806	4433	10237
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10242	31.813	NaN	1286.4	30	0	160.71	0.036	+			5461	ATYWGMKIK	9	59	549.2958153174603	NaN	0	549.2951049804688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATYWGMKIK_	ENSG00000166743|ENST00000520010|ACSM1	42.396135135203025	0.2590952873412954	1				NaN	NaN	0	NaN	5807	4433	10237
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10251	31.835	NaN	1898.8	30	0	251.98	0.214			+	33595	RLNVEGSI	8	51	444.25034606493466	886.4861391966693	2	444.2506408691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RLNVEGSI_	REV__ENSG00000120327|ENST00000239449|PCDHB14;REV__nc|ENSG00000120327|Q9Y5E9-2|PCDHB14	56.72105179125745	0.5342425954139568	1				NaN	NaN	0	NaN	5813	4436	10250
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10252	31.839	NaN	2240.7	30	0	132.18	0.106			+	20919	KIVKGLFPA	9	58	486.81702961186414	971.6195062905283	2	486.816650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KIVKGLFPA_	REV__ENSG00000178385|ENST00000427836|PLEKHM3;REV__nc|ENSG00000178385|Q6ZWE6-2|PLEKHM3	45.9519527083369	0.35044536499095585	1				NaN	NaN	0	NaN	5814	4436	10250
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10253	31.84	NaN	1017.8	30	0	125.42	0.106	+			48995	VVGLPNVGK	9	45	441.77371628465056	881.5328796361011	2	441.7745361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVGLPNVGK_	ENSG00000130119|ENST00000360845|GNL3L	50.0245360154114	0.3026755932229825	1				NaN	NaN	0	NaN	5815	4436	10250
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10254	31.842	NaN	1478.6	30	0	141.46	0.035	+			45474	TYDKGYQF	8	59	511.2344893824072	1020.4544258316145	2	511.7373962402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TYDKGYQF_	ENSG00000139197|ENST00000675855|PEX5;nc|ENSG00000139197|P50542-2|PEX5;nc|ENSG00000139197|P50542-3|PEX5;nc|ENSG00000139197|P50542-4|PEX5	44.116797842482775	0.6307669463330267	1				NaN	NaN	0	NaN	5816	4436	10250
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10261	31.859	NaN	2072.4	30	0	204.95	0.214	+			23326	KYSLIKGNF	9	58	535.3057847070411	1068.597016480882	2	535.305908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KYSLIKGNF_	ENSG00000143546|ENST00000368733|S100A8	64.20726635412375	0.17854274437659667	1				NaN	NaN	0	NaN	5820	4439	10260
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10262	31.862	NaN	3135.1	30	0	370.97	0.106			+	26540	LTRPLCGPL	9	57	485.28104670597617	968.5475404787524	2	485.2809753417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LTRPLCGPL_	REV__ENSG00000125872|ENST00000378858|LRRN4	51.33545320467046	0.2872990594074956	1				NaN	NaN	0	NaN	5821	4439	10260
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10263	31.864	NaN	1621.7	30	0	522.44	0.106	+			32363	QVAEIVSKY	9	55	518.7867277254219	1035.5589025176437	2	518.7872924804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QVAEIVSKY_	ENSG00000138448|ENST00000261023|ITGAV;ITGAV|p.G401Efs*13|1|0.4|ENSG00000138448|chr2:186646721-186646721|A/-|frameshift_variant;ITGAV|p.G561Dfs*2|4|0.23|ENSG00000138448|chr2:186656358-186656358|G/-|frameshift_variant;ITGAV|p.V806Hfs*11|1|0.07|ENSG00000138448|chr2:186667758-186667759|-/CATTTTCAAAA|frameshift_variant;nc|ENSG00000138448|P06756-2|ITGAV;nc|ENSG00000138448|P06756-3|ITGAV	62.107414245175825	0.1960472003779324	1				NaN	NaN	0	NaN	5822	4439	10260
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10264	31.866	NaN	2715.3	30	0	385.09	0.106	+			33032	REISLLKELR	10	55	419.5941606727822	1255.7606526185466	3	419.59429931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_REISLLKELR_	ENSG00000170312|ENST00000395284|CDK1;ENST00000475504.6_1_10:62539923-62545554:+|nuORF;nc|ENSG00000170312|P06493-2|CDK1	42.242577148874844	0.5284808555555522	1				NaN	NaN	0	NaN	5823	4439	10260
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10265	31.868	NaN	588.92	30	0	42.679	0.106	+			18551	ISNDDLLVV	9	50	494.27145294718827	NaN	0	494.2712707519531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ISNDDLLVV_	ENSG00000138119|ENST00000359263|MYOF;MYOF|p.G944Afs*24|1|0.38|ENSG00000138119|chr10:93363998-93363998|C/-|frameshift_variant;MYOF|p.S1621Lfs*14|1|0.18|ENSG00000138119|chr10:93329785-93329785|A/-|frameshift_variant;nc|ENSG00000138119|Q9NZM1-2|MYOF;nc|ENSG00000138119|Q9NZM1-3|MYOF;nc|ENSG00000138119|Q9NZM1-5|MYOF;nc|ENSG00000138119|Q9NZM1-6|MYOF	44.377184641726394	0.24544280798894275	1				NaN	NaN	0	NaN	5824	4439	10260
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10266	31.87	NaN	541.7	30	0	282.92	0.106	+			22504	KTPLKPPLL	9	20	336.2275803721883	NaN	0	336.2274169921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KTPLKPPLL_	SPEN|p.N2053Tfs*11|1|0.43|ENSG00000065526|chr1:15932394-15932394|A/-|frameshift_variant	5.220141733780809	0.4072763090772754	1				NaN	NaN	0	NaN	5825	4439	10260
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10267	31.871	NaN	2459.3	30	0	641.92	0.038			+	19888	KEETFALYR	9	40	386.20442286764126	1155.5914392031239	3	386.20465087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KEETFALYR_	REV__ARID1A|p.A1077Gfs*28|1|0.28|ENSG00000117713|chr1:26771148-26771149|-/G|frameshift_variant;REV__ARID1A|p.F2141Sfs*59|5|0.26|ENSG00000117713|chr1:26780313-26780313|C/-|frameshift_variant;REV__ARID1A|p.K1072Nfs*21|3|0.25|ENSG00000117713|chr1:26771131-26771131|A/-|frameshift_variant;REV__ARID1A|p.K1161Sfs*19|1|0.29|ENSG00000117713|chr1:26772573-26772573|A/-|frameshift_variant;REV__ARID1A|p.M1564Hfs*8|1|0.18|ENSG00000117713|chr1:26774910-26774911|-/C|frameshift_variant;REV__ARID1A|p.N1475Tfs*6|1|0.36|ENSG00000117713|chr1:26774648-26774648|A/-|frameshift_variant;REV__ARID1A|p.P1115Qfs*46|1|0.32|ENSG00000117713|chr1:26771260-26771260|C/-|frameshift_variant;REV__ARID1A|p.P1326Rfs*155|1|0.15|ENSG00000117713|chr1:26773685-26773685|C/-|frameshift_variant;REV__ARID1A|p.P1406Rfs*37|1|0.42|ENSG00000117713|chr1:26774444-26774448|CCCCA/-|frameshift_variant;REV__ARID1A|p.P1568Lfs*44|1|0.14|ENSG00000117713|chr1:26774926-26774926|C/-|frameshift_variant;REV__ARID1A|p.P1575Hfs*37|1|0.38|ENSG00000117713|chr1:26774947-26774947|C/-|frameshift_variant;REV__ARID1A|p.P2114Rfs*21|1|0.46|ENSG00000117713|chr1:26780236-26780236|C/-|frameshift_variant;REV__ARID1A|p.V2244Gfs*34|1|0.31|ENSG00000117713|chr1:26780626-26780627|-/G|frameshift_variant;REV__ENSG00000117713|ENST00000324856|ARID1A;REV__nc|ENSG00000117713|O14497-2|ARID1A;REV__nc|ENSG00000117713|O14497-3|ARID1A	29.14955571784316	0.5308295550522326	1				NaN	NaN	0	NaN	5826	4439	10260
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10272	31.886	NaN	2100.2	30	0	419.23	0.214	+			46889	VIPSSPKEV	9	51	478.27634827772994	954.5381436222599	2	478.27667236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VIPSSPKEV_	ENSG00000196531|ENST00000454682|NACA	37.15910966729921	0.4535818937225704	1				NaN	NaN	0	NaN	5828	4442	10271
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10273	31.889	NaN	1843.9	30	0	165.72	0.035			+	30161	PSEPRSVSF	9	58	503.25364491287877	1004.4927368925576	2	503.25360107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PSEPRSVSF_	REV__ENSG00000140015|ENST00000322893|KCNH5	35.61828744233558	0.47037581924408073	1				NaN	NaN	0	NaN	5829	4442	10271
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10282	31.911	NaN	6207.8	30	0	2207	0.214			+	-1	FKLMGLGAK	9	54	327.52454971257777	979.5518197379333	3	327.8592529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_FKLM(Oxidation (M))GLGAK_	REV__DNAH10|p.D3416Mfs*54|1|0.28|ENSG00000197653|chr12:123914871-123914871|C/-|frameshift_variant;REV__DNAH10|p.N3499Ifs*2|1|0.14|ENSG00000197653|chr12:123916578-123916578|A/-|frameshift_variant;REV__ENSG00000197653|ENST00000673944|DNAH10;REV__nc|ENSG00000197653|Q8IVF4|DNAH10	30.317721548370564	0.5199124245378496	1				NaN	NaN	0	NaN	5835	4445	10281
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10283	31.915	NaN	2809.1	30	0	306.01	0.106			+	32456	QVKQLQQL	8	55	492.7954783463249	983.5764037594498	2	493.297119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QVKQLQQL_	REV__ENSG00000141867|ENST00000679869|BRD4	76.84663266511073	0.3498490246073164	1				NaN	NaN	0	NaN	5836	4445	10281
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10284	31.917	NaN	815.17	30	0	53.203	0.037				-1	YCCCAALFN	9	56	561.2117919921875	NaN	0	561.2117919921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_YC(Carbamidomethyl (C))C(Carbamidomethyl (C))CAALFN_	ENST00000515408.5_1_5:112351033-112351294:+|nuORF	19.359975847455235	0.3714571876404798	1				NaN	NaN	0	NaN	5837	4445	10281
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10296	31.942	NaN	2459.5	30	0	322.44	0.214	+			26857	LVVVSLSSIS	10	57	502.3048743834608	1002.5951958337216	2	502.3055725097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LVVVSLSSIS_	SLFN14|p.R556I|1|0.25|ENSG00000236320|chr17:35552967-35552967|C/A|missense_variant	30.503639358989545	0.6307262373768582	1				NaN	NaN	0	NaN	5846	4448	10295
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10297	31.946	NaN	1474.1	30	0	161.5	0.106	+			35710	SDLKVIVM	8	50	460.75970290222364	919.5048528712473	2	460.7604064941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_SDLKVIVM(Oxidation (M))_	ENSG00000109606|ENST00000336812|DHX15	82.30502934623384	0.30436709589983096	1				NaN	NaN	0	NaN	5847	4448	10295
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10298	31.948	NaN	1286	30	0	58.889	0.106			+	24033	LEEVTQLL	8	55	472.76880658248353	943.5230602317671	2	472.7685241699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LEEVTQLL_	REV__ENSG00000065882|ENST00000698857|TBC1D1;REV__ENST00000401554.5_1_4:38112345-38138953:+|nuORF;REV__ENST00000405444.3_1_4:38134403-38138953:+|nuORF;REV__ENST00000407365.5_1_4:38113700-38138953:+|nuORF;REV__nc|ENSG00000065882|Q86TI0-2|TBC1D1;REV__nc|ENSG00000065882|Q86TI0|TBC1D1	53.351449002276354	0.5676011784961348	1				NaN	NaN	0	NaN	5848	4448	10295
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10299	31.95	NaN	1990.9	30	0	140.16	0.035	+			24120	LEKSMEPSL	9	60	517.2652606707505	1032.515968408301	2	517.2664184570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LEKSMEPSL_	ENSG00000123338|ENST00000293373|NCKAP1L;ENST00000547500.1_1_12:54891564-54894436:+|nuORF;NCKAP1L|p.L134Sfs*11|1|0.04|ENSG00000123338|chr12:54508424-54508425|-/AGTGCTCAATATATTCCGAGTGAATCTAT|frameshift_variant	65.46538089061403	0.16805504838372562	1				NaN	NaN	0	NaN	5849	4448	10295
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10307	31.969	NaN	1088.6	30	0	88.847	0.214			+	25048	LLKFFGAA	8	49	433.76156299665087	865.5085730601018	2	433.7613220214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LLKFFGAA_	REV__ENST00000309415.7_1_2:110260014-110260236:+|nuORF	21.70233525837049	0.7917639344264583	1				NaN	NaN	0	NaN	5854	4451	10306
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10308	31.973	NaN	1894.3	30	0	409.04	0.106	+			49992	WANVGKSL	8	55	437.7426981125944	NaN	0	437.74212646484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WANVGKSL_	ENSG00000109452|ENST00000262992|INPP4B;ENST00000512630.5_1_4:143007384-143094853:-|nuORF	47.657333605630114	1.7418937515398478	1				NaN	NaN	0	NaN	5855	4451	10306
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10309	31.975	NaN	4704.2	30	0	1159.5	0.106	+			15144	GTSELLLAK	9	61	466.2765344790997	930.5385160249995	2	466.2765808105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTSELLLAK_	ASAP1|p.P792Lfs*20|1|0.1|ENSG00000153317|chr8:130112120-130112120|G/-|frameshift_variant;ASAP2|p.H548Qfs*57|1|0.14|ENSG00000151693|chr2:9374842-9374842|C/-|frameshift_variant;ASAP2|p.L787Afs*16|1|0.31|ENSG00000151693|chr2:9388513-9388514|-/C|frameshift_variant;ENSG00000151693|ENST00000281419|ASAP2;ENSG00000153317|ENST00000518721|ASAP1;nc|ENSG00000151693|O43150-2|ASAP2;nc|ENSG00000153317|Q9ULH1-2|ASAP1	75.04331003522576	0.118981335847003	1				NaN	NaN	0	NaN	5856	4451	10306
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10310	31.977	NaN	588.12	30	0	56.883	0.106	+			9133	EGLLTALQ	8	37	422.7419128417969	NaN	0	422.7419128417969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EGLLTALQ_	ENSG00000067221|ENST00000541638|STOML1;nc|ENSG00000067221|Q9UBI4-2|STOML1;nc|ENSG00000067221|Q9UBI4-3|STOML1;nc|ENSG00000067221|Q9UBI4-4|STOML1;nc|ENSG00000067221|Q9UBI4-5|STOML1;STOML1|p.A372Pfs*3|1|0.41|ENSG00000067221|chr15:73984020-73984020|C/-|frameshift_variant	45.9519527083369	1.7418937515398478	1				NaN	NaN	0	NaN	5857	4451	10306
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10311	31.978	NaN	1291.9	30	0	374.13	0.106	+			49892	VYTSKSDVW	9	53	542.7695843260473	NaN	0	542.7689819335938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VYTSKSDVW_	ENSG00000153208|ENST00000295408|MERTK;ENSG00000167601|ENST00000301178|AXL;nc|ENSG00000167601|P30530-2|AXL	54.776311868738084	0.17377682019723872	1				NaN	NaN	0	NaN	5858	4451	10306
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10312	31.98	NaN	2707.9	30	0	317.79	0.106	+			3775	ATAEVLNIGK	10	69	508.2924579862264	1014.5703630392528	2	508.2930603027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATAEVLNIGK_	ENSG00000128050|ENST00000512576|PAICS;ENST00000510584.1_1_4:57302478-57308067:+|nuORF;nc|ENSG00000128050|P22234-2|PAICS	93.5975768576971	0.11047702954938905	1				NaN	NaN	0	NaN	5859	4451	10306
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10313	31.982	NaN	1397.9	30	0	56.208	0.033	+			42341	TAHCFIPL	8	51	451.23464579266954	NaN	0	451.2341613769531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TAHCFIPL_	nc|ENSG00000125726|P32970-2|CD70	52.29916861842294	1.7418937515398478	1				NaN	NaN	0	NaN	5860	4451	10306
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10319	31.998	NaN	497.94	30	0	103.99	0.139				-1	 	0	21	357.7303238814227	713.4460948296454	2	357.7302551269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	5863	4454	10318
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10330	32.034	NaN	2186.5	30	0	374.91	0.214	+			50524	YAPSGNYV	8	47	435.7029741250753	869.3913953169506	2	435.7032165527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YAPSGNYV_	ENSG00000078369|ENST00000378609|GNB1;ENSG00000114450|ENST00000232564|GNB4;nc|ENSG00000078369|P62873-2|GNB1	55.50420428727701	0.5462892107279674	1				NaN	NaN	0	NaN	5868	4460	10329
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10331	32.038	NaN	1153.7	30	0	158.12	0.106	+			16660	HIIAGAGEL	9	44	440.7478261054317	879.4810992776635	2	440.7480773925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HIIAGAGEL_	ENSG00000167658|ENST00000309311|EEF2	26.79610172149135	0.5528238334041078	1				NaN	NaN	0	NaN	5869	4460	10329
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10332	32.04	NaN	1182.6	30	0	79.63	0.106	+			51533	YWILSEGLDLK	11	44	446.241205639145	NaN	0	446.24090576171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YWILSEGLDLK_	ENST00000479790.2_1_13:22067163-22067286:-|nuORF	29.550750289552195	0.43372083775723597	1				NaN	NaN	0	NaN	5870	4460	10329
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10333	32.042	NaN	1679.6	30	0	386.62	0.034				-1	SMLIYAIL	8	52	470.2662855489484	938.5180181646969	2	470.26617431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_SM(Oxidation (M))LIYAIL_	tr|U7SUU1|U7SUU1_FUSNUCDP-diacylglycerol--serineO-phosphatidyltransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01007PE=3SV=1	35.200714571348534	0.6875396545722289	1				NaN	NaN	0	NaN	5871	4460	10329
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10340	32.06	NaN	2224.3	30	0	347.82	0.214			+	18641	ISTNNYVL	8	60	462.2450674616019	922.4755819900038	2	462.2457275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ISTNNYVL_	REV__ENSG00000171453|ENST00000642195|POLR1C;REV__ENST00000481352.6_1_6:43484832-43487644:+|nuORF;REV__nc|ENSG00000171453|O15160-2|POLR1C	45.9519527083369	0.6193794311207887	1				NaN	NaN	0	NaN	5875	4463	10339
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10341	32.063	NaN	2565.7	30	0	1316.3	0.106				-1	ALKMCRVFK	9	49	556.3108063470953	1110.6070597609905	2	556.3121337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_ALKM(Oxidation (M))CRVFK_	ENSG00000160746|ENST00000292246|ANO10;nc|ENSG00000160746|Q9NW15-2|ANO10;nc|ENSG00000160746|Q9NW15-3|ANO10;nc|ENSG00000160746|Q9NW15-4|ANO10;nc|ENSG00000160746|Q9NW15-5|ANO10	35.61828744233558	0.47037581924408073	1				NaN	NaN	0	NaN	5876	4463	10339
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10342	32.065	NaN	2022.6	30	0	355.57	0.106	+			28418	NETVAIHSL	9	55	492.26198480324655	982.5094166732931	2	492.2618408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NETVAIHSL_	ENSG00000082269|ENST00000418814|FAM135A;FAM135A|p.N1165Ifs*3|1|0.07|ENSG00000082269|chr6:70526577-70526578|-/T|frameshift_variant;FAM135A|p.N999Ifs*5|1|0.39|ENSG00000082269|chr6:70526073-70526073|A/-|frameshift_variant;FAM135A|p.N999Kfs*2|1|0.18|ENSG00000082269|chr6:70526072-70526073|-/A|frameshift_variant;nc|ENSG00000082269|Q9P2D6-2|FAM135A;nc|ENSG00000082269|Q9P2D6-3|FAM135A;nc|ENSG00000082269|Q9P2D6-4|FAM135A	95.81516180277367	0.04847050768394289	1				NaN	NaN	0	NaN	5877	4463	10339
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10343	32.067	NaN	945.01	30	0	125.83	0.106				-1	SYICYGPLL	9	44	543.270787959595	NaN	0	543.2709350585938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_SYIC(Carbamidomethyl (C))YGPLL_	ENSG00000111058|ENST00000548058|ACSS3;nc|ENSG00000111058|Q9H6R3-2|ACSS3	25.450171626174864	0.34907449758287085	1				NaN	NaN	0	NaN	5878	4463	10339
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10344	32.069	NaN	1726.9	30	0	187.1	0.034				-1	PMVLSLVVP	9	53	485.787386410148	NaN	0	485.78753662109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_PM(Oxidation (M))VLSLVVP_	DNHD1|p.R1358Afs*11|1|0.16|ENSG00000179532|chr11:6545007-6545007|C/-|frameshift_variant;DNHD1|p.S3597Rfs*6|1|0.1|ENSG00000179532|chr11:6565718-6565719|-/AG|frameshift_variant;DNHD1|p.T4259Pfs*33|2|0.33|ENSG00000179532|chr11:6568772-6568772|C/-|frameshift_variant;ENSG00000179532|ENST00000254579|DNHD1	33.51558372728122	0.30835390848773375	1				NaN	NaN	0	NaN	5879	4463	10339
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10351	32.087	NaN	20630	30	0	4690.6	0.214	+			6136	AVQEFGLAR	9	62	495.7717802961672	989.5290076591344	2	495.771728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVQEFGLAR_	ENSG00000169230|ENST00000303204|PRELID1;nc|ENSG00000169230|Q9Y255-2|PRELID1	155.5846463517096	0.005567437401040498	1				NaN	NaN	0	NaN	5883	4466	10350
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10352	32.09	NaN	1264.4	30	0	120.35	0.106	+			23674	LASLGLQLE	9	45	472.2760306981559	942.5375084631119	2	472.2755432128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LASLGLQLE_	ENSG00000204536|ENST00000396268|CCHCR1;ENST00000486060.1_1_6:31112443-31112875:-|nuORF;ENST00000509552.5_1_6:31112443-31124902:-|nuORF;nc|ENSG00000204536|Q8TD31-3|CCHCR1;nc|ENSG00000204536|Q8TD31|CCHCR1	64.20726635412375	0.17854274437659667	1				NaN	NaN	0	NaN	5884	4466	10350
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10353	32.092	NaN	2004.5	30	0	128.37	0.106	+			16309	HEIEALKSF	9	61	537.2846508761534	1072.5547488191066	2	537.2850341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HEIEALKSF_	ENSG00000078618|ENST00000352171|NRDC;nc|ENSG00000078618|O43847-2|NRDC	85.16082228582465	0.07850854922700509	1				NaN	NaN	0	NaN	5885	4466	10350
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10354	32.094	NaN	1556	30	0	180.18	0.034			+	37752	SLVAVVRAP	9	45	456.28697509087647	910.559397248553	2	456.28717041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLVAVVRAP_	REV__ENSG00000162975|ENST00000295082|KCNF1	18.324413293986947	0.6112419832031293	1				NaN	NaN	0	NaN	5886	4466	10350
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10361	32.11	NaN	3115.8	30	0	1007.8	0.214	+			38015	SPMESTQSL	9	50	490.2234879866279	978.4324230400558	2	490.2234191894531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SPMESTQSL_	ENSG00000131242|ENST00000621161|RAB11FIP4;nc|ENSG00000131242|Q86YS3-2|RAB11FIP4	58.22992032128504	0.22837015374068087	1				NaN	NaN	0	NaN	5890	4469	10360
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10362	32.114	NaN	1257.9	30	0	157.6	0.106			+	27316	MHEAVAWGP	9	51	499.23137736727193	996.4482018013439	2	499.232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MHEAVAWGP_	REV__ENST00000470006.1_1_3:48716398-48717131:-|nuORF;REV__nc|ENSG00000213672|Q9NZQ3-5|NCKIPSD	26.79610172149135	0.5528238334041078	1				NaN	NaN	0	NaN	5891	4469	10360
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10363	32.116	NaN	1314.4	30	0	273.02	0.106			+	10084	ESKESAVI	8	37	431.72950135647613	NaN	0	431.7287902832031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ESKESAVI_	REV__tr|U7T8R5|U7T8R5_FUSNUPeptidaseM20domain-containingprotein2OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00140PE=3SV=1	57.81127852772723	1.7418937515398478	1				NaN	NaN	0	NaN	5892	4469	10360
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10364	32.118	NaN	2089	30	0	193.69	0.035			+	-1	VGKITMSVY	9	70	507.2694269754658	1012.5243010177317	2	507.2695007324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_VGKITM(Oxidation (M))SVY_	REV__ENSG00000036448|ENST00000262113|MYOM2	40.77816245573522	0.41113185337114944	1				NaN	NaN	0	NaN	5893	4469	10360
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10373	32.138	NaN	1475.6	30	0	535.94	0.214	+			97	AADFGLAR	8	36	410.7189595679849	NaN	0	410.71893310546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AADFGLAR_	ENST00000505733.5_1_16:89758861-89762180:+|nuORF;ENST00000507205.5_1_16:89759738-89759876:+|nuORF	31.954861631926434	1.7418937515398478	1				NaN	NaN	0	NaN	5899	4472	10372
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10374	32.141	NaN	896.85	30	0	91.686	0.106			+	7610	DKDLNNYY	8	43	522.7351141793688	1043.4556754255375	2	522.7351684570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DKDLNNYY_	REV__tr|U7SJQ2|U7SJQ2_FUSNUHemechaperoneHemWOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02051PE=3SV=1	26.79610172149135	0.7524337208463756	1				NaN	NaN	0	NaN	5900	4472	10372
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10375	32.143	NaN	1354.4	30	0	139.29	0.106	+			29272	NYGPMKGGSF	10	53	529.2424303658414	NaN	0	529.2421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NYGPMKGGSF_	ENSG00000170144|ENST00000392524|HNRNPA3;ENST00000451198.2_1_20:35249346-35249823:+|nuORF;ENST00000472163.1_1_3:75263799-75264780:+|nuORF;nc|ENSG00000170144|P51991-2|HNRNPA3	37.81151784470057	0.3760215235790741	1				NaN	NaN	0	NaN	5901	4472	10372
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10376	32.145	NaN	1203.7	30	0	149.55	0.106			+	30656	QAVGAHRPWA	10	56	546.787355456907	1091.560157980614	2	546.7885131835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QAVGAHRPWA_	REV__ENSG00000234186|ENST00000505035|C16orf82;REV__nc|nan|Q7Z2V1|C16orf82	32.81241826257853	0.6118718159329168	1				NaN	NaN	0	NaN	5902	4472	10372
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10377	32.147	NaN	1146.3	30	0	85.493	0.037	+			47312	VNVEINVAPGK	11	52	570.3244497528017	1138.6343465724033	2	570.324951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VNVEINVAPGK_	CON__P35527;ENSG00000171403|ENST00000246662|KRT9	51.72707519102574	0.3974808554116684	1				NaN	NaN	0	NaN	5903	4472	10372
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10382	32.161	NaN	2807.2	30	0	682.03	0.214	+			3274	ASLPLAVTK	9	58	450.28146478792155	898.5483766426431	2	450.28155517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASLPLAVTK_	ENSG00000160796|ENST00000450053|NBEAL2;nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2;nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2	69.6276240434122	0.14239879520340665	1				NaN	NaN	0	NaN	5905	4475	10381
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10383	32.165	NaN	1108.9	30	0	130.2	0.106	+			48247	VTDETFLEK	9	54	541.2745629772423	NaN	0	541.2745361328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTDETFLEK_	ENSG00000128641|ENST00000392318|MYO1B;ENST00000494129.1_1_2:192246088-192252282:+|nuORF;MYO1B|p.A603Sfs*37|1|0.42|ENSG00000128641|chr2:191390310-191390311|-/A|frameshift_variant;MYO1B|p.F948Cfs*47|1|0.41|ENSG00000128641|chr2:191411140-191411141|-/TG|frameshift_variant;MYO1B|p.S730Afs*4|2|0.4|ENSG00000128641|chr2:191393178-191393178|A/-|frameshift_variant;nc|ENSG00000128641|O43795-2|MYO1B	58.22992032128504	0.15686832049467786	1				NaN	NaN	0	NaN	5906	4475	10381
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10384	32.167	NaN	1712.8	30	0	201.84	0.106	+			30448	PYTKVEESF	9	63	550.268680430862	1098.522807928524	2	550.7725219726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PYTKVEESF_	ENSG00000182858|ENST00000330817|ALG12	60.11826168202944	0.21262886028301267	1				NaN	NaN	0	NaN	5907	4475	10381
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10385	32.169	NaN	880.76	30	0	130.19	0.036				-1	KSFSRAPCL	9	51	533.2781139539765	1064.5416749747528	2	533.279052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_KSFSRAPC(Carbamidomethyl (C))L_	ENSG00000267680|ENST00000693561|ZNF224;ENST00000591551.1_1_19:44610541-44612434:+|nuORF	27.882242232435846	0.5426732730940306	1				NaN	NaN	0	NaN	5908	4475	10381
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10393	32.187	NaN	1036.4	30	0	144.03	0.214				-1	STCIGILAK	9	47	481.76995900581346	NaN	0	481.77032470703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_STC(Carbamidomethyl (C))IGILAK_	EDC4|p.D801Mfs*15|1|0.26|ENSG00000038358|chr16:67880857-67880857|G/-|frameshift_variant;EDC4|p.Q792Sfs*24|1|0.37|ENSG00000038358|chr16:67880829-67880829|C/-|frameshift_variant;ENSG00000038358|ENST00000358933|EDC4;ENST00000536072.6_1_16:67909906-67914140:+|nuORF;ENST00000572221.5_1_16:67909733-67911757:+|nuORF	58.78195531508484	0.1545138866451181	1				NaN	NaN	0	NaN	5913	4478	10392
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10394	32.19	NaN	1618	30	0	417.26	0.035	+			2167	ALLTEQDVN	9	54	501.7588311581861	NaN	0	501.75872802734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ALLTEQDVN_	ENSG00000162624|ENST00000356261|LHX8;nc|ENSG00000162624|Q68G74|LHX8	45.97224482568171	0.23445038899310136	1				NaN	NaN	0	NaN	5914	4478	10392
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10399	32.205	NaN	3649.8	30	0	466.86	0.214	+			15003	GTNALLVVK	9	60	457.7868387398784	913.5591245465569	2	457.7870178222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTNALLVVK_	ENSG00000006712|ENST00000221265|PAF1;nc|ENSG00000006712|Q8N7H5-2|PAF1;nc|ENSG00000006712|Q8N7H5-3|PAF1	90.60085204095205	0.06317133949006545	1				NaN	NaN	0	NaN	5916	4481	10398
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10400	32.209	NaN	660.15	30	0	105.71	0.033	+			48991	VVGLERPL	8	29	441.77371628465056	881.5328796361011	2	441.773681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVGLERPL_	ENST00000377516.6_1_1:7903664-7903865:-|nuORF	31.954861631926434	0.7126016770032289	1				NaN	NaN	0	NaN	5917	4481	10398
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10406	32.225	NaN	2109.5	30	0	359.79	0.214	+			24409	LGAILNNLL	9	59	470.794741754268	939.574930575336	2	470.79437255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LGAILNNLL_	ENSG00000106278|ENST00000393386|PTPRZ1;nc|ENSG00000106278|P23471-2|PTPRZ1;nc|ENSG00000106278|P23471-3|PTPRZ1	40.5726180659479	0.4135428067754104	1				NaN	NaN	0	NaN	5920	4484	10405
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10407	32.228	NaN	719.21	30	0	106.97	0.032	+			46184	VDVTAPKV	8	40	414.74500834047575	NaN	0	414.74505615234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VDVTAPKV_	AHNAK2|p.D4448Gfs*6|1|0.2|ENSG00000185567|chr14:104942108-104942109|-/C|frameshift_variant;AHNAK2|p.E5149Gfs*8|1|0.32|ENSG00000185567|chr14:104940005-104940006|-/C|frameshift_variant;AHNAK2|p.E5446Gfs*7|1|0.32|ENSG00000185567|chr14:104939114-104939115|-/C|frameshift_variant;AHNAK2|p.L4206Cfs*19|1|0.12|ENSG00000185567|chr14:104942835-104942835|G/-|frameshift_variant;ENSG00000185567|ENST00000333244|AHNAK2;nc|ENSG00000185567|Q8IVF2-3|AHNAK2	42.396135135203025	1.7418937515398478	1				NaN	NaN	0	NaN	5921	4484	10405
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10413	32.245	NaN	1052.4	30	0	176.94	0.214	+			37876	SNVGVALTF	9	46	454.24923857657814	906.4839242199563	2	454.2486267089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SNVGVALTF_	ENSG00000138615|ENST00000261883|CILP	27.882242232435846	0.5426732730940306	1				NaN	NaN	0	NaN	5924	4487	10412
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10414	32.248	NaN	1343	30	0	171.88	0.039	+			24528	LGLDSLNKKRL	11	46	419.59383544409206	NaN	0	419.59393310546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LGLDSLNKKRL_	ENSG00000161021|ENST00000292599|MAML1;MAML1|p.A378Qfs*63|1|0.17|ENSG00000161021|chr5:179766137-179766137|C/-|frameshift_variant;MAML1|p.P424Rfs*17|1|0.25|ENSG00000161021|chr5:179766278-179766278|C/-|frameshift_variant	32.03412808689991	0.42265347483761584	1				NaN	NaN	0	NaN	5925	4487	10412
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10423	32.27	NaN	2627.6	30	0	745.32	0.143	+			45036	TVGEVFYTK	9	62	522.2736766652718	1042.5328003973434	2	522.274169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVGEVFYTK_	ENSG00000204385|ENST00000229729|SLC44A4;nc|ENSG00000204385|Q53GD3-3|SLC44A4;SLC44A4|p.F618Sfs*25|1|0.43|ENSG00000204385|chr6:31864889-31864889|A/-|frameshift_variant;SLC44A4|p.G398Afs*7|1|0.29|ENSG00000204385|chr6:31869197-31869197|G/-|frameshift_variant;SLC44A4|p.N144Kfs*55|2|0.31|ENSG00000204385|chr6:31874757-31874758|-/T|frameshift_variant;SLC44A4|p.S619Lfs*9|1|0.31|ENSG00000204385|chr6:31864888-31864889|-/A|frameshift_variant	63.53385203322761	0.18415635464017938	1				NaN	NaN	0	NaN	5931	4490	10422
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10429	32.288	NaN	4401.5	30	0	1647.6	0.142			+	20462	KEVLIKAE	8	45	465.28673167127357	928.5589104093472	2	465.2864685058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEVLIKAE_	REV__tr|U7SIR8|U7SIR8_FUSNUATP-dependenthelicaseIRC3OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02152PE=4SV=1	69.6276240434122	0.4100012001731381	1				NaN	NaN	0	NaN	5934	4493	10428
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10440	32.315	NaN	1947.8	30	0	164.27	0.214	+			17567	IEAGVTAATYT	11	62	548.77892071616	1095.5432884991199	2	548.7794189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IEAGVTAATYT_	ENSG00000157450|ENST00000348370|RNF111;nc|ENSG00000157450|Q6ZNA4-3|RNF111;nc|ENSG00000157450|Q6ZNA4-4|RNF111;nc|ENSG00000157450|Q6ZNA4|RNF111	32.81241826257853	0.645615689454792	1				NaN	NaN	0	NaN	5942	4496	10439
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10441	32.319	NaN	2335.6	30	0	276.76	0.106	+			5070	ATSKVALVY	9	66	476.27895783501447	950.543362736829	2	476.2787170410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATSKVALVY_	ENSG00000110955|ENST00000262030|ATP5F1B	45.97224482568171	0.3502073465782774	1				NaN	NaN	0	NaN	5943	4496	10439
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10442	32.321	NaN	1097.2	30	0	298.23	0.035			+	29470	PCQPVTLYL	9	50	517.2738692179099	1032.5331855026197	2	517.2734985351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PCQPVTLYL_	REV__ENSG00000196557|ENST00000348261|CACNA1H;REV__nc|ENSG00000196557|O95180-2|CACNA1H	27.882242232435846	0.5426732730940306	1				NaN	NaN	0	NaN	5944	4496	10439
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10448	32.337	NaN	1058.2	30	0	85.728	0.214	+			18338	IQAKDMIG	8	43	438.23620001394414	874.4578470946883	2	438.23614501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IQAKDMIG_	CDH19|p.L614Ffs*16|1|0.27|ENSG00000071991|chr18:66505289-66505290|-/A|frameshift_variant;CDH19|p.P710Rfs*20|1|0.25|ENSG00000071991|chr18:66505004-66505004|A/-|frameshift_variant;ENSG00000071991|ENST00000262150|CDH19;nc|ENSG00000071991|Q9H159-2|CDH19	55.50420428727701	0.5462892107279674	1				NaN	NaN	0	NaN	5947	4499	10447
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10449	32.341	NaN	1288.8	30	0	216.74	0.036			+	20978	KKFEIVIAE	9	49	538.8216805166951	NaN	0	538.820556640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KKFEIVIAE_	REV__tr|U7SV81|U7SV81_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01551PE=4SV=1	26.063383197487333	0.34597851983111116	1				NaN	NaN	0	NaN	5948	4499	10447
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10460	32.366	NaN	6025.6	30	0	684.84	0.142	+			35306	SAMKAVTEL	9	65	475.25454395658863	948.4945349799773	2	475.2544860839844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAMKAVTEL_	ENSG00000128245|ENST00000248975|YWHAH	120.30596017624542	0.02101454110788768	1				NaN	NaN	0	NaN	5956	4502	10459
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10471	32.392	NaN	2462	30	0	341.42	0.141	+			186	AALDKATVL	9	58	451.2710410890521	900.5275292449043	2	451.27093505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AALDKATVL_	ENSG00000150593|ENST00000280154|PDCD4;ENST00000489049.5_1_10:112647518-112650449:+|nuORF;nc|ENSG00000150593|Q53EL6-2|PDCD4	115.49404669440601	0.023927554121326553	1				NaN	NaN	0	NaN	5964	4505	10470
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10479	32.414	NaN	1953.1	30	0	125.24	0.214	+			3161	ASINLNAINK	10	57	529.3035376152292	1056.5925222972583	2	529.3038940429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASINLNAINK_	ENSG00000149925|ENST00000642816|ALDOA;ENST00000398050.3_1_10:127355642-127355750:-|nuORF;nc|ENSG00000149925|P04075|ALDOA	75.04331003522576	0.23611669241777622	1				NaN	NaN	0	NaN	5969	4508	10478
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10480	32.417	NaN	1971.2	30	0	829.26	0.034	+			13975	GSATSLVFK	9	55	455.25545242809574	908.4963519229915	2	455.2550048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSATSLVFK_	ENSG00000227345|ENST00000616448|PARG;PARG|p.D904Tfs*4|1|0.16|ENSG00000227345|chr10:49820231-49820231|C/-|frameshift_variant;PARG|p.N277Mfs*5|3|0.4|ENSG00000227345|chr10:49933618-49933618|T/-|frameshift_variant	58.22992032128504	0.22837015374068087	1				NaN	NaN	0	NaN	5970	4508	10478
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10488	32.437	NaN	4338.4	30	0	1229.9	0.214	+			44801	TTQVVGILK	9	55	479.80008829158356	957.5856236499671	2	479.799560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTQVVGILK_	ENSG00000198898|ENST00000361183|CAPZA2;ENST00000426421.5_1_7:116544367-116557918:+|nuORF	76.16968421966216	0.11411088698345859	1				NaN	NaN	0	NaN	5975	4511	10487
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10489	32.441	NaN	2049.7	30	0	296.05	0.106	+			6137	AVQEFGLAR	9	53	495.7717802961672	989.5290076591344	2	495.7717590332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVQEFGLAR_	ENSG00000169230|ENST00000303204|PRELID1;nc|ENSG00000169230|Q9Y255-2|PRELID1	138.06239232086	0.011389075116295402	1				NaN	NaN	0	NaN	5976	4511	10487
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10490	32.443	NaN	1601.6	30	0	230.31	0.036			+	18202	IMSSEVTIAK	10	57	539.79474368705	NaN	0	539.7941284179688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IMSSEVTIAK_	REV__ENSG00000125818|ENST00000335877|PSMF1;REV__PSMF1|p.A161Cfs*26|1|0.07|ENSG00000125818|chr20:1135228-1135229|-/C|frameshift_variant;REV__PSMF1|p.P160Lfs*39|1|0.15|ENSG00000125818|chr20:1135229-1135229|C/-|frameshift_variant	37.81151784470057	0.3760215235790741	1				NaN	NaN	0	NaN	5977	4511	10487
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10498	32.461	NaN	5454.5	30	0	1016.5	0.214	+			38831	SSNIFTVAK	9	68	483.76624096423416	965.5179289952683	2	483.76678466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSNIFTVAK_	ENSG00000100280|ENST00000357586|AP1B1;ENST00000482818.1_1_22:29726183-29727937:-|nuORF;nc|ENSG00000100280|Q10567-2|AP1B1;nc|ENSG00000100280|Q10567-3|AP1B1;nc|ENSG00000100280|Q10567-4|AP1B1	99.78786539795823	0.03941834715970116	1				NaN	NaN	0	NaN	5982	4514	10497
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10499	32.465	NaN	3608	30	0	422.46	0.106	+			44260	TSALPIIQK	9	71	485.8001073826854	969.5856618321708	2	485.8004150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TSALPIIQK_	ENSG00000147872|ENST00000276914|PLIN2;ENST00000472715.1_1_9:19126103-19127487:-|nuORF;ENST00000475923.1_1_9:19126103-19126313:-|nuORF;PLIN2|p.V348*|1|0.15|ENSG00000147872|chr9:19116520-19116520|C/-|frameshift_variant	76.7741389293348	0.11149722112137898	1				NaN	NaN	0	NaN	5983	4514	10497
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10500	32.467	NaN	2574.2	30	0	663.39	0.106	+			30796	QEALHTQML	9	65	535.7687744246765	1069.522995916153	2	535.7705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QEALHTQML_	ENSG00000137076|ENST00000314888|TLN1;nc|ENSG00000137076|Q9Y490-2|TLN1	44.377184641726394	0.36891676396732553	1				NaN	NaN	0	NaN	5984	4514	10497
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10501	32.468	NaN	2258.4	30	0	340.44	0.035	+			28316	NEFTTHVM	8	57	489.72101418167244	977.4274754301449	2	489.72137451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NEFTTHVM_	ENSG00000167081|ENST00000373489|PBX3;ENSG00000185630|ENST00000420696|PBX1;ENSG00000204304|ENST00000375050|PBX2;ENST00000478678.5_1_6:32154995-32157692:-|nuORF;ENST00000538998.1_1_9:128606084-128725334:+|nuORF;nc|ENSG00000167081|P40426-2|PBX3;nc|ENSG00000167081|P40426-5|PBX3;nc|ENSG00000185630|P40424-2|PBX1;nc|ENSG00000185630|P40424-3|PBX1	51.33545320467046	0.5859736979383976	1				NaN	NaN	0	NaN	5985	4514	10497
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10512	32.504	NaN	4306.8	30	0	788.52	0.214	+			5145	ATSVITIVK	9	54	466.29451007647094	930.5744672197419	2	466.29461669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSVITIVK_	ENSG00000197063|ENST00000357736|MAFG	85.16082228582465	0.07850854922700509	1				NaN	NaN	0	NaN	5990	4520	10511
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10513	32.507	NaN	2577.4	30	0	138.16	0.106	+			31253	QHLRRMPRV	9	74	596.8463325178787	1191.6781121025574	2	596.8474731445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QHLRRMPRV_	ENSG00000168081|ENST00000301908|PNOC;nc|ENSG00000168081|Q13519-2|PNOC	51.19269402634007	0.2889735674168909	1				NaN	NaN	0	NaN	5991	4520	10511
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10514	32.509	NaN	1926	30	0	172.31	0.106	+			36260	SENKLPAEL	9	52	500.7689813897404	999.5234098462809	2	500.7691650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SENKLPAEL_	ENSG00000100823|ENST00000216714|APEX1;ENST00000557159.5_1_14:20924026-20925664:+|nuORF	56.43379154798735	0.2433427591689151	1				NaN	NaN	0	NaN	5992	4520	10511
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10515	32.511	NaN	2035.5	30	0	281.92	0.106	+			29856	PLEFLCLLG	9	57	502.7800816734033	1003.5456104136066	2	502.7821044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PLEFLCLLG_	ENST00000562866.1_1_16:89783858-89784437:+|nuORF	40.5726180659479	0.4135428067754104	1				NaN	NaN	0	NaN	5993	4520	10511
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10516	32.513	NaN	1289.1	30	0	196.88	0.04			+	23322	KYRLDDQTNQS	11	50	684.328125	NaN	0	684.328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KYRLDDQTNQS_	REV__nc|ENSG00000197617|Q7Z5H4|VN1R5	45.02220120713402	0.3510711409553835	1				NaN	NaN	0	NaN	5994	4520	10511
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10528	32.549	NaN	1694.9	30	0	159.32	0.144	+			29303	NYLTREVY	8	56	529.2695374178423	1056.5245219024846	2	529.27099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NYLTREVY_	ENSG00000166145|ENST00000562057|SPINT1;nc|ENSG00000166145|O43278|SPINT1;SPINT1|p.K371Nfs*82|1|0.38|ENSG00000166145|chr15:40854517-40854517|A/-|frameshift_variant	47.91560031466742	0.6071945918984287	1				NaN	NaN	0	NaN	6000	4526	10527
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10536	32.571	NaN	1709.9	30	0	145.85	0.214	+			5544	AVALPLQTK	9	50	470.794741754268	939.574930575336	2	470.79486083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVALPLQTK_	ENSG00000171566|ENST00000499023|PLRG1;ENST00000512719.5_1_4:155467261-155471460:-|nuORF;nc|ENSG00000171566|O43660-2|PLRG1	37.15910966729921	0.4535818937225704	1				NaN	NaN	0	NaN	6005	4529	10535
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10537	32.574	NaN	1311.2	30	0	169.03	0.106	+			5328	ATVNEIVLK	9	53	493.79785631352206	985.5811596938441	2	493.79730224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATVNEIVLK_	ARHGEF18-MAPKAP1|1|fusion;ARHGEF18-MAPKAP1|2|fusion;ENSG00000119487|ENST00000265960|MAPKAP1;ENST00000497932.5_1_9:128201168-128209649:-|nuORF;nc|ENSG00000119487|Q9BPZ7-2|MAPKAP1;nc|ENSG00000119487|Q9BPZ7-3|MAPKAP1;nc|ENSG00000119487|Q9BPZ7-4|MAPKAP1	31.529811441608018	0.5085848003137583	1				NaN	NaN	0	NaN	6006	4529	10535
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10538	32.576	NaN	1046.3	30	0	113.08	0.035			+	9981	ERIIHSIM	8	55	507.77233048432345	NaN	0	507.7721862792969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_ERIIHSIM(Oxidation (M))_	REV__ENSG00000058335|ENST00000558480|RASGRF1;REV__ENSG00000113319|ENST00000265080|RASGRF2;REV__nc|ENSG00000058335|Q13972-2|RASGRF1;REV__nc|ENSG00000058335|Q13972|RASGRF1	44.116797842482775	1.7418937515398478	1				NaN	NaN	0	NaN	6007	4529	10535
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10548	32.598	NaN	1273.5	30	0	159.71	0.144	+			9298	EHSFLPSSY	9	57	533.7458893917506	1065.477225850301	2	533.7454833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EHSFLPSSY_	ENSG00000019991|ENST00000222390|HGF;nc|ENSG00000019991|P14210-2|HGF;nc|ENSG00000019991|P14210-4|HGF;nc|ENSG00000019991|P14210-6|HGF	45.9519527083369	0.35044536499095585	1				NaN	NaN	0	NaN	6014	4532	10547
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10552	32.615	NaN	1875.1	30	0	201.37	0.214	+			44185	TQWLICVL	8	63	488.2713428740637	974.5281328149274	2	488.2713317871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TQWLICVL_	ENST00000256458.4_1_3:10255026-10264411:+|nuORF;IRAK2|p.N268Mfs*102|1|0.23|ENSG00000134070|chr3:10216943-10216943|C/-|frameshift_variant	45.9519527083369	0.6193794311207887	1				NaN	NaN	0	NaN	6015	4535	10551
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10553	32.618	NaN	1714.9	30	0	207.73	0.106	+			45326	TVSGIQVRY	9	56	511.7847390230698	1021.5549251129396	2	511.7854919433594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVSGIQVRY_	ENSG00000129354|ENST00000250244|AP1M2;nc|ENSG00000129354|Q9Y6Q5-2|AP1M2	49.44154591367651	0.3095138337212152	1				NaN	NaN	0	NaN	6016	4535	10551
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10554	32.62	NaN	1713.4	30	0	186.59	0.034			+	27030	LYTTVQTL	8	53	469.7628792550769	937.5112055769538	2	469.7631530761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LYTTVQTL_	REV__ENSG00000187823|ENST00000695839|RTL4	84.9155231211612	0.2928622555056503	1				NaN	NaN	0	NaN	6017	4535	10551
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10559	32.635	NaN	2067.2	30	0	348.43	0.214	+			152	AAIEASQSL	9	49	445.23451480783285	888.4544766824657	2	445.23419189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAIEASQSL_	ENSG00000168297|ENST00000356151|PXK;nc|ENSG00000168297|Q7Z7A4-2|PXK;nc|ENSG00000168297|Q7Z7A4-4|PXK;nc|ENSG00000168297|Q7Z7A4-6|PXK	65.46538089061403	0.16805504838372562	1				NaN	NaN	0	NaN	6019	4538	10558
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10560	32.638	NaN	1634.5	30	0	204.6	0.106	+			47861	VSLGLAVSK	9	51	437.27359662350455	872.5326403138091	2	437.27362060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSLGLAVSK_	ENSG00000018869|ENST00000586929|ZNF582;ENSG00000197302|ENST00000316491|KRBOX5;ENSG00000197566|ENST00000311331|ZNF624;ENST00000529943.6_1_16:31724760-31765604:+|nuORF;ENST00000534277.5_1_16:31724760-31767037:+|nuORF;ENST00000579983.1_1_17:16534952-16537956:-|nuORF;ZNF624|p.I325Nfs*9|1|0.21|ENSG00000197566|chr17:16623912-16623913|-/T|frameshift_variant;ZNF624|p.I325Sfs*167|1|0.46|ENSG00000197566|chr17:16623913-16623913|T/-|frameshift_variant;ZNF624|p.K498Nfs*74|1|0.49|ENSG00000197566|chr17:16623392-16623392|T/-|frameshift_variant;ZNF624|p.K666Nfs*130|1|0.46|ENSG00000197566|chr17:16622888-16622888|T/-|frameshift_variant;ZNF624|p.K787Ifs*14|1|0.11|ENSG00000197566|chr17:16622526-16622527|-/ATAAATGTAATGAA|frameshift_variant	96.0336014099291	0.047854655524928534	1				NaN	NaN	0	NaN	6020	4538	10558
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10561	32.64	NaN	1280	30	0	112.99	0.106	+			8749	EEFQNVRI	8	57	517.768875688162	NaN	0	517.7692260742188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EEFQNVRI_	ENSG00000122687|ENST00000242257|MRM2;ENST00000467199.5_1_7:2274759-2281791:-|nuORF;ENST00000486040.1_1_7:2274759-2277695:-|nuORF	40.5726180659479	1.7418937515398478	1				NaN	NaN	0	NaN	6021	4538	10558
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10562	32.642	NaN	1082.8	30	0	131.96	0.034	+			13601	GLVSGFVPSV	10	43	481.27281761358574	NaN	0	481.273681640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GLVSGFVPSV_	OSBPL9|p.D109V|1|0.2|ENSG00000117859|chr1:51745543-51745543|A/T|missense_variant	49.44154591367651	0.30913310806145605	1				NaN	NaN	0	NaN	6022	4538	10558
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10570	32.662	NaN	13696	30	0	1804	0.214	+			50459	YAEVGRVL	8	63	453.75548715389186	905.4964213745837	2	453.7557373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YAEVGRVL_	ANKRD17|p.L2249Yfs*84|1|0.34|ENSG00000132466|chr4:73090884-73090884|G/-|frameshift_variant;ENSG00000131503|ENST00000360839|ANKHD1;ENSG00000132466|ENST00000358602|ANKRD17;ENST00000514252.1_1_4:73978989-74017230:-|nuORF;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1;nc|ENSG00000132466|O75179-2|ANKRD17;nc|ENSG00000132466|O75179-6|ANKRD17;nc|ENSG00000132466|O75179-7|ANKRD17	84.9155231211612	0.2928622555056503	1				NaN	NaN	0	NaN	6027	4541	10569
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10571	32.665	NaN	1220.4	30	0	119.75	0.106	+			45501	TYETKTALL	9	54	520.2874737309825	NaN	0	520.287353515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TYETKTALL_	ENSG00000100242|ENST00000689035|SUN2;nc|ENSG00000100242|Q9UH99-2|SUN2;nc|ENSG00000100242|Q9UH99-3|SUN2	29.170058357718403	0.3302935627494407	1				NaN	NaN	0	NaN	6028	4541	10569
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10572	32.667	NaN	1566.5	30	0	143.06	0.035				-1	RTYPCSPI	8	60	497.24587982222823	992.4772067112565	2	497.2454833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_RTYPC(Carbamidomethyl (C))SPI_	ENST00000220562.8_1_8:28608908-28609217:+|nuORF	42.396135135203025	0.6414440140393314	1				NaN	NaN	0	NaN	6029	4541	10569
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10579	32.685	NaN	10728	30	0	1137.8	0.214	+			12994	GEVDPKVAL	9	70	464.2606740479806	926.5067951627613	2	464.2605285644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEVDPKVAL_	ENSG00000099795|ENST00000215565|NDUFB7;ENST00000593353.5_1_19:14676947-14682853:-|nuORF	95.81516180277367	0.04847050768394289	1				NaN	NaN	0	NaN	6033	4544	10578
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10580	32.689	NaN	2831	30	0	599.25	0.106	+			24227	LESKGLTL	8	46	430.7577395795572	859.5009262259144	2	430.75738525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LESKGLTL_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;CLCA4|p.S847Kfs*4|1|0.28|ENSG00000016602|chr1:86580120-86580121|-/A|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1;ENSG00000016602|ENST00000370563|CLCA4	84.9155231211612	0.2928622555056503	1				NaN	NaN	0	NaN	6034	4544	10578
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10581	32.691	NaN	2104.1	30	0	292.14	0.106			+	13626	GMGGLVVMVL	10	65	488.2713428740637	974.5281328149274	2	488.2701110839844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GMGGLVVMVL_	REV__tr|U7T6Y8|U7T6Y8_FUSNUBranched-chainaminoacidtransportsystempermeaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00056PE=4SV=1	35.200714571348534	0.5923680232273616	1				NaN	NaN	0	NaN	6035	4544	10578
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10582	32.693	NaN	1436.2	30	0	218.88	0.106	+			49615	VYGVSKETF	9	52	515.2652964733401	1028.51604001348	2	515.2659301757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VYGVSKETF_	ENSG00000164292|ENST00000379982|RHOBTB3;RHOBTB3|p.K539Rfs*53|1|0.25|ENSG00000164292|chr5:95783952-95783952|A/-|frameshift_variant	87.69643885390035	0.07135982304947239	1				NaN	NaN	0	NaN	6036	4544	10578
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10583	32.694	NaN	877.51	30	0	66.674	0.034	+			20693	KGPNKYTL	8	48	460.76294588902914	NaN	0	460.7632141113281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KGPNKYTL_	ENST00000507234.1_1_5:14639922-14640066:-|nuORF	31.954861631926434	1.7418937515398478	1				NaN	NaN	0	NaN	6037	4544	10578
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10594	32.72	NaN	1420.6	30	0	364.52	0.214			+	31548	QLLQPQLL	8	53	476.7951016672896	951.5756504013792	2	476.7948303222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QLLQPQLL_	REV__CDK13|p.A162Pfs*174|1|0.41|ENSG00000065883|chr7:39951118-39951118|G/-|frameshift_variant;REV__CDK13|p.K911Nfs*13|1|0.17|ENSG00000065883|chr7:40063048-40063048|A/-|frameshift_variant;REV__CDK13|p.V736Yfs*32|1|0.2|ENSG00000065883|chr7:40001877-40001877|A/-|frameshift_variant;REV__ENSG00000065883|ENST00000181839|CDK13;REV__nc|ENSG00000065883|Q14004-2|CDK13	40.5726180659479	0.6527593143185008	1				NaN	NaN	0	NaN	6045	4547	10593
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10595	32.723	NaN	3970.3	30	0	509.93	0.106				-1	SECGKAFSL	9	66	499.73384639219546	997.4531398511909	2	500.23480224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SEC(Carbamidomethyl (C))GKAFSL_	ENSG00000106261|ENST00000324306|ZKSCAN1;ENSG00000186230|ENST00000334181|ZNF749;ENSG00000186272|ENST00000307658|ZNF17;ENSG00000186812|ENST00000330501|ZNF397;ENSG00000198393|ENST00000328654|ZNF26;ENST00000602050.1_1_19:57930944-57932846:+|nuORF;nc|ENSG00000186272|P17021-3|ZNF17;nc|ENSG00000186272|P17021|ZNF17;ZNF852|p.G393S|1|0.24|ENSG00000178917|chr3:44499600-44499600|C/T|missense_variant	68.84614121027924	0.14577793175421136	1				NaN	NaN	0	NaN	6046	4547	10593
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10596	32.725	NaN	1214.3	30	0	365.39	0.106	+			43398	TGHSVDILKN	10	30	361.8658434732911	1082.5757010200732	3	361.8658752441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TGHSVDILKN_	ENST00000521621.5_1_5:178047568-178050263:-|nuORF	27.882242232435846	0.6521336255503853	1				NaN	NaN	0	NaN	6047	4547	10593
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10597	32.727	NaN	982.1	30	0	149.35	0.034	+			24826	LISPEPWA	8	49	456.744384765625	NaN	0	456.744384765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LISPEPWA_	nc|ENSG00000063245|Q9Y6I3-1|EPN1	28.2542754592877	1.7418937515398478	1				NaN	NaN	0	NaN	6048	4547	10593
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10605	32.747	NaN	3989.1	30	0	1779.2	0.214	+			32473	QVMSLGLQK	9	61	502.28334913257004	1002.5521453319401	2	502.2835998535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QVMSLGLQK_	ENST00000314423.11_1_16:69166475-69170710:+|nuORF;ENST00000562237.5_1_16:69166520-69170710:+|nuORF	79.71258880314673	0.09879134589249085	1				NaN	NaN	0	NaN	6053	4550	10604
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10606	32.75	NaN	2265	30	0	297.9	0.106			+	46643	VGDFNGIAVY	10	65	527.7634818896136	1053.512410846027	2	527.7638549804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VGDFNGIAVY_	REV__tr|U7SVP5|U7SVP5_FUSNURiboflavinbiosynthesisproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01294PE=3SV=1	60.97194046774394	0.3570005369683776	1				NaN	NaN	0	NaN	6054	4550	10604
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10607	32.752	NaN	904.01	30	0	106.95	0.035			+	44928	TVAKTAEFI	9	47	490.27644973220407	NaN	0	490.27667236328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVAKTAEFI_	REV__nc|ENSG00000173406|O75553-3|DAB1;REV__nc|ENSG00000173406|O75553-5|DAB1;REV__nc|ENSG00000173406|O75553|DAB1	51.33545320467046	0.19748963086191895	1				NaN	NaN	0	NaN	6055	4550	10604
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10613	32.768	NaN	1665.3	30	0	220.97	0.214	+			28290	NECGKAFSL	9	58	513.2392509469731	1024.4639489607462	2	513.2396850585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_NEC(Carbamidomethyl (C))GKAFSL_	ENSG00000197062|ENST00000421553|ZSCAN26;ENSG00000197782|ENST00000683561|ZNF780A;nc|ENSG00000197062|Q16670-2|ZSCAN26;nc|ENSG00000197062|Q16670|ZSCAN26;nc|ENSG00000197782|O75290-3|ZNF780A	85.86182877749512	0.07653218437724067	1				NaN	NaN	0	NaN	6058	4553	10612
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10614	32.772	NaN	3015.8	30	0	1346.7	0.106	+			17169	HTMEFALVK	9	59	538.2835643363911	1074.5525757395822	2	538.2843627929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HTMEFALVK_	ENSG00000182636|ENST00000649030|NDN	64.20726635412375	0.17854274437659667	1				NaN	NaN	0	NaN	6059	4553	10612
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10615	32.774	NaN	1624.5	30	0	193.4	0.106			+	28565	NKFTNDLI	8	52	482.7582070640517	963.5018611949034	2	482.7585144042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NKFTNDLI_	REV__tr|U7SKU9|U7SKU9_FUSNUNTEfamilyproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01940PE=4SV=1	38.80614096846853	0.6637206697844082	1				NaN	NaN	0	NaN	6060	4553	10612
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10616	32.776	NaN	1136	30	0	146.82	0.106	+			2885	ASASRVAGVT	10	56	459.7558038445927	NaN	0	459.75579833984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASASRVAGVT_	ENST00000587681.5_1_19:10229095-10230535:-|nuORF	44.377184641726394	0.34115073642966565	1				NaN	NaN	0	NaN	6061	4553	10612
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10617	32.777	NaN	564.16	30	0	189.14	0.038	+			13054	GEYKMILVVQ	10	29	393.8861083984375	NaN	0	393.8861083984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GEYKMILVVQ_	PTRH2|p.R72Q|1|0.37|ENSG00000141378|chr17:59697764-59697764|C/T|missense_variant	23.04248740728303	0.42010282974921537	1				NaN	NaN	0	NaN	6062	4553	10612
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10624	32.794	NaN	2522.5	30	0	632.12	0.214	+			44828	TTSVITIVK	9	55	481.30000254576726	960.5854521583345	2	481.3005676269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTSVITIVK_	ENSG00000198517|ENST00000343242|MAFK	54.776311868738084	0.25715957988447635	1				NaN	NaN	0	NaN	6066	4556	10623
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10625	32.797	NaN	4087.6	30	0	654.41	0.106	+			6283	AVSTFAMVK	9	59	477.25939598767894	952.5042390421579	2	477.25933837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVSTFAMVK_	ENSG00000172893|ENST00000355527|DHCR7;ENST00000534701.1_1_11:71149825-71152361:-|nuORF	60.97194046774394	0.20551255781574032	1				NaN	NaN	0	NaN	6067	4556	10623
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10626	32.799	NaN	963.51	30	0	122.3	0.106	+			10857	FATRSLDI	8	48	461.75285979503826	921.4911666568765	2	461.7523193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FATRSLDI_	ENSG00000106701|ENST00000481272|FSD1L;ENST00000480279.1_1_9:108226543-108246709:+|nuORF;nc|ENSG00000106701|Q9BXM9-2|FSD1L;nc|ENSG00000106701|Q9BXM9-3|FSD1L	51.33545320467046	0.5859736979383976	1				NaN	NaN	0	NaN	6068	4556	10623
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10627	32.801	NaN	1337.1	30	0	168.21	0.106				-1	VTSCFLVEK	9	58	541.7797786857329	1081.5450044382658	2	542.2821655273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_VTSC(Carbamidomethyl (C))FLVEK_	ENSG00000166888|ENST00000300134|STAT6;nc|ENSG00000166888|P42226-2|STAT6;nc|ENSG00000166888|P42226-3|STAT6;STAT6|p.G815Efs*27|3|0.31|ENSG00000166888|chr12:57096672-57096672|C/-|frameshift_variant	33.921630207806714	0.48623198279849766	1				NaN	NaN	0	NaN	6069	4556	10623
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10628	32.803	NaN	1271.4	30	0	63.688	0.038	+			34817	RYLEQLHQL	9	39	400.5558740694788	NaN	0	400.55615234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RYLEQLHQL_	ENSG00000168610|ENST00000264657|STAT3;nc|ENSG00000168610|P40763-2|STAT3;nc|ENSG00000168610|P40763-3|STAT3;STAT3|p.R729Afs*3|2|0.33|ENSG00000168610|chr17:42316861-42316861|G/-|frameshift_variant	25.57405402267927	0.3484490411150625	1				NaN	NaN	0	NaN	6070	4556	10623
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10637	32.825	NaN	287860	30	0	56900	0.134	+			44261	TSALPIIQK	9	90	485.8001073826854	969.5856618321708	2	485.7999572753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSALPIIQK_	ENSG00000147872|ENST00000276914|PLIN2;ENST00000472715.1_1_9:19126103-19127487:-|nuORF;ENST00000475923.1_1_9:19126103-19126313:-|nuORF;PLIN2|p.V348*|1|0.15|ENSG00000147872|chr9:19116520-19116520|C/-|frameshift_variant	153.03582135801034	0.006161527642367307	1				NaN	NaN	0	NaN	6076	4559	10636
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10638	32.827	NaN	4499.4	30	0	565.71	0.106				-1	 	0	68	518.2949272607507	1034.5753015883013	2	518.2952270507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	6077	4559	10636
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10639	32.829	NaN	1653.5	30	0	148.69	0.036			+	-1	GELCLLIMK	9	58	546.7948956852545	1091.5752384373088	2	547.2971801757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_GELC(Carbamidomethyl (C))LLIM(Oxidation (M))K_	REV__ENST00000504490.2_1_4:113277971-113278631:+|nuORF	35.61828744233558	0.47037581924408073	1				NaN	NaN	0	NaN	6078	4559	10636
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10655	32.872	NaN	4054.9	30	0	2715	0.214	+			41362	SVMELARLK	9	21	349.5387416816632	1045.5943956451897	3	349.53900146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVMELARLK_	ENSG00000115649|ENST00000360507|CNPPD1	25.57405402267927	0.5642445186134241	1				NaN	NaN	0	NaN	6088	4565	10654
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10656	32.875	NaN	4871.3	30	0	2308.9	0.106	+			43105	TERDLREVF	9	42	388.8714763191736	1163.5925995577209	3	388.8715515136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TERDLREVF_	ENSG00000136527|ENST00000453386|TRA2B;ENSG00000164548|ENST00000297071|TRA2A;ENST00000494255.5_1_7:23547037-23556014:-|nuORF;nc|ENSG00000136527|P62995-3|TRA2B;nc|ENSG00000164548|Q13595-2|TRA2A;nc|ENSG00000164548|Q13595-3|TRA2A;nc|ENSG00000164548|Q13595-4|TRA2A	40.77816245573522	0.41113185337114944	1				NaN	NaN	0	NaN	6089	4565	10654
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10657	32.877	NaN	1933	30	0	450.67	0.106			+	5680	AVDTTTLPT	9	55	459.74240606570544	917.4702591982109	2	459.7420959472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVDTTTLPT_	REV__DAO|p.F39V|1|0.17|ENSG00000110887|chr12:108885121-108885121|T/G|missense_variant;REV__ENSG00000110887|ENST00000228476|DAO	44.116797842482775	0.37197099687881774	1				NaN	NaN	0	NaN	6090	4565	10654
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10658	32.879	NaN	1334.7	30	0	91.561	0.106	+			50035	WEDSAEKEVFK	11	63	684.3279814487356	NaN	0	684.3265991210938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_WEDSAEKEVFK_	nc|ENSG00000163939|Q86U86-4|PBRM1;nc|ENSG00000163939|Q86U86-9|PBRM1	25.57405402267927	0.45144328854727944	1				NaN	NaN	0	NaN	6091	4565	10654
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10659	32.881	NaN	1073.4	30	0	330.05	0.034	+			47925	VSLTGTKTE	9	41	468.2547697793035	NaN	0	468.25469970703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSLTGTKTE_	ENST00000424011.6_2_16:66646856-66647075:+|nuORF	26.69291269510374	0.34280015626154364	1				NaN	NaN	0	NaN	6092	4565	10654
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10670	32.906	NaN	1647.7	30	0	168.78	0.143	+			6777	CFDYEVKI	8	65	508.7433208797634	1015.4720888263269	2	508.7466735839844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CFDYEVKI_	ENSG00000091181|ENST00000446632|IL5RA;nc|ENSG00000091181|Q01344-2|IL5RA;nc|ENSG00000091181|Q01344-3|IL5RA;nc|ENSG00000091181|Q01344-4|IL5RA	38.80614096846853	0.6637206697844082	1				NaN	NaN	0	NaN	6100	4568	10669
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10679	32.93	NaN	1688.3	30	0	317.75	0.215	+			46246	VEEQLIRY	8	59	525.2836132848056	NaN	0	525.2840576171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VEEQLIRY_	CSPG4|p.E1665Sfs*10|1|0.39|ENSG00000173546|chr15:75677845-75677845|G/-|frameshift_variant;ENSG00000173546|ENST00000308508|CSPG4	45.9519527083369	1.7418937515398478	1				NaN	NaN	0	NaN	6106	4571	10678
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10680	32.933	NaN	859.64	30	0	59.903	0.035			+	7229	DALAAVFQR	9	41	495.77128299391006	NaN	0	495.7716979980469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DALAAVFQR_	REV__ENSG00000115183|ENST00000263635|TANC1;REV__ENST00000470074.1_1_2:160076105-160087520:+|nuORF;REV__nc|ENSG00000115183|Q9C0D5-2|TANC1	29.14955571784316	0.3303970763161698	1				NaN	NaN	0	NaN	6107	4571	10678
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10691	32.959	NaN	5280.8	30	0	1110.5	0.142	+			11325	FLAVRSSY	8	52	471.75586013621376	941.4971673392275	2	471.7554626464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FLAVRSSY_	ENST00000296328.8_1_3:196089371-196089518:-|nuORF	47.91560031466742	0.6071945918984287	1				NaN	NaN	0	NaN	6115	4574	10690
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10698	32.979	NaN	3732.2	30	0	874.84	0.214	+			46459	VETAKVYQL	9	67	525.7953836881096	1049.5762144430191	2	525.7954711914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VETAKVYQL_	ENSG00000137815|ENST00000389629|RTF1;RTF1|p.D528Ifs*12|1|0.29|ENSG00000137815|chr15:41477182-41477182|G/-|frameshift_variant	58.22992032128504	0.22837015374068087	1				NaN	NaN	0	NaN	6119	4577	10697
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10699	32.982	NaN	3309.2	30	0	415.17	0.106	+			36521	SFEDAKEAL	9	58	505.24545450974995	1008.4763560862999	2	505.2455749511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SFEDAKEAL_	ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232319904-232323320:-|nuORF	95.81516180277367	0.04847050768394289	1				NaN	NaN	0	NaN	6120	4577	10697
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10700	32.984	NaN	1203.9	30	0	291.31	0.036	+			28836	NPSGNLTETY	10	51	548.2511110555502	1094.4876691779002	2	548.2515869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NPSGNLTETY_	ENSG00000196924|ENST00000369850|FLNA;FLNA|p.G2237Efs*109|1|0.28|ENSG00000196924|chrX:154352240-154352240|C/-|frameshift_variant;FLNA|p.Q1716Sfs*23|2|0.38|ENSG00000196924|chrX:154354896-154354896|G/-|frameshift_variant;FLNA|p.R2520Vfs*16|1|0.7|ENSG00000196924|chrX:154349560-154349560|G/-|frameshift_variant;nc|ENSG00000196924|P21333-2|FLNA	47.95952297671804	0.47580206326914537	1				NaN	NaN	0	NaN	6121	4577	10697
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10705	32.999	NaN	1408.1	30	0	188.92	0.214	+			50460	YAEVGRVL	8	50	453.75548715389186	905.4964213745837	2	453.7554016113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YAEVGRVL_	ANKRD17|p.L2249Yfs*84|1|0.34|ENSG00000132466|chr4:73090884-73090884|G/-|frameshift_variant;ENSG00000131503|ENST00000360839|ANKHD1;ENSG00000132466|ENST00000358602|ANKRD17;ENST00000514252.1_1_4:73978989-74017230:-|nuORF;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1;nc|ENSG00000132466|O75179-2|ANKRD17;nc|ENSG00000132466|O75179-6|ANKRD17;nc|ENSG00000132466|O75179-7|ANKRD17	76.7741389293348	0.3504530765139327	1				NaN	NaN	0	NaN	6123	4580	10704
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10706	33.002	NaN	1207.7	30	0	193.4	0.037				-1	ISLKLMGRVM	10	52	582.3374210254913	1162.6602891177824	2	582.33837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_ISLKLMGRVM(Oxidation (M))_	ENST00000381298.6_1_5:55233024-55233087:-|nuORF	31.529811441608018	0.6223461015008678	1				NaN	NaN	0	NaN	6124	4580	10704
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10714	33.022	NaN	3477.1	30	0	1765.7	0.214	+			35502	SATTSPFFK	9	53	493.2534764620482	984.4923999908964	2	493.2528076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SATTSPFFK_	ENSG00000133961|ENST00000555238|NUMB;nc|ENSG00000133961|P49757-2|NUMB;nc|ENSG00000133961|P49757-3|NUMB;nc|ENSG00000133961|P49757-4|NUMB;nc|ENSG00000133961|P49757-5|NUMB;nc|ENSG00000133961|P49757-6|NUMB;nc|ENSG00000133961|P49757-7|NUMB;nc|ENSG00000133961|P49757-8|NUMB;nc|ENSG00000133961|P49757-9|NUMB	39.252832667884924	0.4290233611298554	1				NaN	NaN	0	NaN	6129	4583	10713
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10715	33.026	NaN	1166.9	30	0	124.13	0.036			+	-1	VAMMLPFPK	9	56	533.2769740938443	1064.5393952544885	2	533.278564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Oxidation (M)	_VAM(Oxidation (M))M(Oxidation (M))LPFPK_	REV__ENST00000569597.1_1_16:8738315-8739997:+|nuORF	33.51558372728122	0.4900267029546261	1				NaN	NaN	0	NaN	6130	4583	10713
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10727	33.062	NaN	1434.4	30	0	184.31	0.214			+	36319	SESLTKLAL	9	48	481.282145460214	960.549737987228	2	481.2818908691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SESLTKLAL_	REV__ENST00000592558.1_1_19:39123109-39125644:+|nuORF	51.33545320467046	0.2872990594074956	1				NaN	NaN	0	NaN	6136	4589	10726
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10728	33.065	NaN	1438.6	30	0	293.58	0.036				-1	LWVWCEPS	8	54	538.7474835986259	NaN	0	538.7468872070312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LWVWC(Carbamidomethyl (C))EPS_	ENST00000471490.1_1_21:45539071-45541135:+|nuORF	31.954861631926434	1.7418937515398478	1				NaN	NaN	0	NaN	6137	4589	10726
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10734	33.082	NaN	2314.3	30	0	325.85	0.214	+			36841	SIFGGAKPV	9	47	438.25315699871766	874.4917610642353	2	438.2533264160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIFGGAKPV_	ENSG00000063046|ENST00000262056|EIF4B;ENST00000432132.2_1_9:98909238-98910135:+|nuORF;ENST00000432307.1_1_X:110862947-110863739:-|nuORF;nc|ENSG00000063046|P23588-2|EIF4B	56.72105179125745	0.24094814563026265	1				NaN	NaN	0	NaN	6140	4592	10733
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10735	33.085	NaN	1668.5	30	0	170.73	0.036			+	48018	VSRAAMKYSS	10	62	550.2807005952991	1098.546848257398	2	550.2818603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSRAAMKYSS_	REV__ENST00000347635.8_1_22:45559863-45559941:+|nuORF	40.05817265558897	0.5486090488315611	1				NaN	NaN	0	NaN	6141	4592	10733
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10748	33.123	NaN	2622.2	30	0	822.12	0.214	+			30658	QAVILDQKY	9	57	539.3010309607309	1076.5875089882618	2	539.8038330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QAVILDQKY_	ENSG00000127831|ENST00000248444|VIL1	75.04331003522576	0.118981335847003	1				NaN	NaN	0	NaN	6148	4598	10747
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10749	33.127	NaN	885.27	30	0	107.76	0.035	+			17370	IALVHTDSY	9	55	509.7641226078471	NaN	0	509.76470947265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IALVHTDSY_	ENSG00000198961|ENST00000361189|PJA2;nc|ENSG00000198961|O43164-2|PJA2;PJA2|p.D450Rfs*6|1|0.16|ENSG00000198961|chr5:109368682-109368683|-/T|frameshift_variant	54.776311868738084	0.17377682019723872	1				NaN	NaN	0	NaN	6149	4598	10747
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10756	33.145	NaN	1544.1	30	0	439.09	0.141	+			41169	SVKPQILV	8	40	442.2840416742179	882.5535304152359	2	442.2844543457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVKPQILV_	ENSG00000173166|ENST00000319170|RAPH1;RAPH1|p.K1026Qfs*47|1|0.27|ENSG00000173166|chr2:203440114-203440115|-/G|frameshift_variant	24.20275056022122	0.7724576178584145	1				NaN	NaN	0	NaN	6153	4601	10755
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10760	33.161	NaN	6211.5	30	0	914.02	0.214	+			44262	TSALPIIQK	9	59	485.8001073826854	969.5856618321708	2	485.7998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSALPIIQK_	ENSG00000147872|ENST00000276914|PLIN2;ENST00000472715.1_1_9:19126103-19127487:-|nuORF;ENST00000475923.1_1_9:19126103-19126313:-|nuORF;PLIN2|p.V348*|1|0.15|ENSG00000147872|chr9:19116520-19116520|C/-|frameshift_variant	87.75429964447693	0.0711966946989736	1				NaN	NaN	0	NaN	6154	4604	10759
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10761	33.165	NaN	4021.5	30	0	1029.6	0.106	+			36729	SGVSLAALK	9	57	423.2582086902496	844.5018644472992	2	423.2584533691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SGVSLAALK_	ENSG00000124575|ENST00000244534|H1-3;ENSG00000168298|ENST00000304218|H1-4;ENSG00000187837|ENST00000343677|H1-2	109.47833844074708	0.029530294723441826	1				NaN	NaN	0	NaN	6155	4604	10759
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10762	33.167	NaN	1962.5	30	0	528.8	0.036	+			38497	SSATTSPFFK	10	60	536.7694078281769	1071.5242627231537	2	536.7706298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSATTSPFFK_	ENSG00000133961|ENST00000555238|NUMB;nc|ENSG00000133961|P49757-2|NUMB;nc|ENSG00000133961|P49757-3|NUMB;nc|ENSG00000133961|P49757-4|NUMB;nc|ENSG00000133961|P49757-5|NUMB;nc|ENSG00000133961|P49757-6|NUMB;nc|ENSG00000133961|P49757-7|NUMB;nc|ENSG00000133961|P49757-8|NUMB;nc|ENSG00000133961|P49757-9|NUMB	56.43379154798735	0.3982744522255666	1				NaN	NaN	0	NaN	6156	4604	10759
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10773	33.192	NaN	1579.4	30	0	409.93	0.142			+	-1	LVSICSKK	8	50	467.7717254968964	NaN	0	467.77203369140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_LVSIC(Carbamidomethyl (C))SKK_	REV__ENSG00000132481|ENST00000254816|TRIM47;REV__ENST00000587339.2_2_17:73870566-73874273:-|nuORF;REV__nc|ENSG00000132481|Q96LD4-2|TRIM47	47.91560031466742	1.7418937515398478	1				NaN	NaN	0	NaN	6164	4607	10772
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10784	33.218	NaN	3268.4	30	0	1490.5	0.143	+			31857	QPVKSFPTM	9	57	517.7702750417128	1033.5259971502255	2	517.7711181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QPVKSFPTM_	ENSG00000164944|ENST00000297591|VIRMA;nc|ENSG00000164944|Q69YN4-2|VIRMA;nc|ENSG00000164944|Q69YN4-3|VIRMA;nc|ENSG00000164944|Q69YN4-4|VIRMA	29.14955571784316	0.5308295550522326	1				NaN	NaN	0	NaN	6172	4610	10783
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10792	33.238	NaN	3450.3	30	0	788.51	0.214	+			11051	FENKFAVET	9	59	542.7688312314023	1083.5231095296044	2	542.770263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FENKFAVET_	ARHGEF7-ITM2B|1|fusion;ARHGEF7-ITM2B|2|fusion;ARHGEF7-ITM2B|3|fusion;ARHGEF7-ITM2B|4|fusion;ENSG00000136156|ENST00000647800|ITM2B;nc|ENSG00000136156|Q9Y287-2|ITM2B	123.20810148215591	0.019257656778428764	1				NaN	NaN	0	NaN	6177	4613	10791
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10793	33.242	NaN	3565.2	30	0	425.2	0.106	+			44263	TSALPIIQK	9	61	485.8001073826854	969.5856618321708	2	485.800537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TSALPIIQK_	ENSG00000147872|ENST00000276914|PLIN2;ENST00000472715.1_1_9:19126103-19127487:-|nuORF;ENST00000475923.1_1_9:19126103-19126313:-|nuORF;PLIN2|p.V348*|1|0.15|ENSG00000147872|chr9:19116520-19116520|C/-|frameshift_variant	71.87747018426188	0.13267044672804276	1				NaN	NaN	0	NaN	6178	4613	10791
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10794	33.244	NaN	5781.5	30	0	1529.4	0.106			+	36862	SIFNNVVI	8	58	453.25794065137035	904.5013283695407	2	453.7597961425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SIFNNVVI_	REV__HMCN1|p.V2976I|1|0.21|ENSG00000143341|chr1:186086287-186086287|G/A|missense_variant	42.47446043378293	0.6409579893742323	1				NaN	NaN	0	NaN	6179	4613	10791
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10795	33.246	NaN	3572.3	30	0	1222.3	0.106				-1	ALQFMKHWINI	11	51	472.9205204558283	1415.739731967685	3	472.92156982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_ALQFM(Oxidation (M))KHWINI_	ENST00000432673.1_1_6:139013686-139015644:+|nuORF	31.634271133179894	0.6579734920221648	1				NaN	NaN	0	NaN	6180	4613	10791
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10796	33.248	NaN	2136.9	30	0	414.84	0.034	+			15323	GTVITSVIK	9	55	459.28660809030134	916.5586632474027	2	459.28656005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTVITSVIK_	ENSG00000120690|ENST00000239882|ELF1;nc|ENSG00000120690|P32519-2|ELF1	71.87747018426188	0.13267044672804276	1				NaN	NaN	0	NaN	6181	4613	10791
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10804	33.266	NaN	3309.5	30	0	849.78	0.146	+			15305	GTVDVTPFIKK	11	41	402.2354952756335	1203.6846564271007	3	402.236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTVDVTPFIKK_	ENSG00000198408|ENST00000361464|OGA;nc|ENSG00000198408|O60502-2|OGA;nc|ENSG00000198408|O60502-4|OGA	21.780426970141523	0.7613322811393133	1				NaN	NaN	0	NaN	6186	4616	10803
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10819	33.306	NaN	1708.1	30	0	495.08	0.143	+			32718	RALLILDGL	9	51	492.315869091767	982.617185250334	2	492.3149108886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RALLILDGL_	ENSG00000167984|ENST00000359128|NLRC3;nc|ENSG00000167984|Q7RTR2-2|NLRC3;nc|ENSG00000167984|Q7RTR2-3|NLRC3;nc|ENSG00000167984|Q7RTR2-4|NLRC3	47.91560031466742	0.327412564698279	1				NaN	NaN	0	NaN	6195	4622	10818
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10840	33.359	NaN	15841	30	0	1646.6	0.214	+			42662	TAVTVNQSL	9	71	466.7556442741166	931.4967356150332	2	466.7558288574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAVTVNQSL_	CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000425226.1_1_2:203706028-203706388:-|nuORF;ENST00000550170.5_1_12:53294858-53298765:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	172.24860141594272	0.002383092361811508	1				NaN	NaN	0	NaN	6210	4628	10839
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10841	33.363	NaN	3357.6	30	0	794.7	0.106	+			41980	SVYDSVLQK	9	62	519.7765188182068	1037.5384847032135	2	519.777099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVYDSVLQK_	ENSG00000131018|ENST00000367255|SYNE1;ENST00000490135.6_1_6:152637953-152655276:-|nuORF;nc|ENSG00000131018|Q8NF91-4|SYNE1;nc|ENSG00000131018|Q8NF91-7|SYNE1;SYNE1|p.E4738Kfs*25|1|0.12|ENSG00000131018|chr6:152330474-152330474|T/-|frameshift_variant;SYNE1|p.E5862Gfs*83|1|0.12|ENSG00000131018|chr6:152300729-152300738|CCAGACTCCT/-|frameshift_variant;SYNE1|p.G6773Wfs*7|1|0.44|ENSG00000131018|chr6:152236186-152236187|-/A|frameshift_variant;SYNE1|p.K6871Rfs*22|2|0.52|ENSG00000131018|chr6:152233881-152233881|T/-|frameshift_variant;SYNE1|p.L8283Pfs*8|1|0.19|ENSG00000131018|chr6:152148173-152148174|-/G|frameshift_variant;SYNE1|p.M5602Nfs*13|2|0.32|ENSG00000131018|chr6:152310779-152310780|-/T|frameshift_variant;SYNE1|p.V8635Sfs*12|1|0.15|ENSG00000131018|chr6:152133375-152133375|T/-|frameshift_variant	75.04331003522576	0.118981335847003	1				NaN	NaN	0	NaN	6211	4628	10839
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10842	33.365	NaN	7081	30	0	740.5	0.106	+			8118	DYMKTTSNF	9	69	553.744213997221	1105.4738750612419	2	553.7451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DYMKTTSNF_	ENSG00000165525|ENST00000298310|NEMF;nc|ENSG00000165525|O60524-3|NEMF;nc|ENSG00000165525|O60524-4|NEMF;NEMF|p.K641Rfs*9|1|0.15|ENSG00000165525|chr14:49802721-49802721|T/-|frameshift_variant;NEMF|p.M879*|1|0.12|ENSG00000165525|chr14:49789558-49789558|T/-|frameshift_variant;NEMF|p.M879Nfs*10|1|0.13|ENSG00000165525|chr14:49789557-49789558|-/T|frameshift_variant	134.7655990226056	0.012935733000282069	1				NaN	NaN	0	NaN	6212	4628	10839
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10843	33.367	NaN	6241.8	30	0	906.04	0.106	+			5799	AVIDVGINR	9	55	478.779436813323	955.544320693446	2	478.7796936035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVIDVGINR_	ENSG00000065911|ENST00000394053|MTHFD2;nc|ENSG00000065911|P13995-2|MTHFD2	93.19546047674547	0.05585629608842056	1				NaN	NaN	0	NaN	6213	4628	10839
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10844	33.369	NaN	2060.6	30	0	677.57	0.106				-1	EMGKSCIKM	9	65	558.2483444825174	1114.4821360318347	2	558.2489013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C),2 Oxidation (M)	_EM(Oxidation (M))GKSC(Carbamidomethyl (C))IKM(Oxidation (M))_	ZFYVE16|p.I1258M|1|0.36|ENSG00000039319|chr5:80456544-80456544|A/G|missense_variant	29.14955571784316	0.5308295550522326	1				NaN	NaN	0	NaN	6214	4628	10839
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10845	33.37	NaN	1627.2	30	0	320.05	0.034	+			24362	LFPLAPQE	8	54	457.7509566345284	NaN	0	457.7506103515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LFPLAPQE_	ENSG00000076685|ENST00000404739|NT5C2;nc|ENSG00000076685|P49902-2|NT5C2	44.116797842482775	1.7418937515398478	1				NaN	NaN	0	NaN	6215	4628	10839
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10846	33.371	NaN	2738.4	30	0	340.8	0.14	+			37420	SLGPEPLPIP	10	69	510.29162145085155	1018.5686899685031	2	510.29217529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SLGPEPLPIP_	CNKSR1|p.H694Tfs*16|1|0.42|ENSG00000142675|chr1:26189460-26189460|C/-|frameshift_variant;CNKSR1|p.P512Hfs*58|2|0.35|ENSG00000142675|chr1:26188287-26188287|C/-|frameshift_variant;CNKSR1|p.P513Tfs*9|2|0.38|ENSG00000142675|chr1:26188286-26188287|-/C|frameshift_variant;ENSG00000142675|ENST00000361530|CNKSR1;nc|ENSG00000142675|Q969H4|CNKSR1	58.78195531508484	0.37691818691852547	1				NaN	NaN	0	NaN	6216	4628	10839
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10856	33.396	NaN	2196.4	30	0	849.51	0.215	+			31860	QPVKVLGENY	10	52	573.8103520948413	1145.6061512564825	2	573.81103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QPVKVLGENY_	ENSG00000108883|ENST00000426333|EFTUD2;ENST00000586276.5_1_17:42937766-42940268:-|nuORF;ENST00000590367.5_1_17:42931463-42950195:-|nuORF;nc|ENSG00000108883|Q15029-2|EFTUD2;nc|ENSG00000108883|Q15029-3|EFTUD2	28.081489160057373	0.6505064946289502	1				NaN	NaN	0	NaN	6223	4631	10855
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10857	33.4	NaN	2084.2	30	0	207.8	0.034	+			12364	GDQLEIQL	8	51	458.2422872637896	914.4700215943792	2	458.24310302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GDQLEIQL_	chr17:30631979-30633098|469|11.26|0.0|20.1|+|2|None,LRRC37BP1|1;ENSG00000185158|ENST00000543378|LRRC37B;ENST00000417404.2_1_17:28960066-28961284:+|nuORF;ENST00000579094.1_1_17:30374694-30380344:+|nuORF;ENST00000579766.1_1_17:30376071-30377294:+|nuORF;LRRC37B|p.T873Qfs*22|1|0.32|ENSG00000185158|chr17:32049330-32049330|A/-|frameshift_variant;nc|ENSG00000185158|Q96QE4-2|LRRC37B;nc|ENSG00000185158|Q96QE4|LRRC37B	42.396135135203025	0.6414440140393314	1				NaN	NaN	0	NaN	6224	4631	10855
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10866	33.421	NaN	3446.3	30	0	752.14	0.214			+	7565	DIFKLAEAL	9	62	510.29162145085155	1018.5686899685031	2	510.292724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DIFKLAEAL_	REV__ENSG00000126756|ENST00000333119|UXT;REV__ENST00000376964.3_1_X:47516580-47516661:-|nuORF;REV__nc|ENSG00000126756|Q9UBK9-2|UXT	39.252832667884924	0.4290233611298554	1				NaN	NaN	0	NaN	6230	4634	10865
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10867	33.425	NaN	1388.6	30	0	482.74	0.106			+	47025	VLCDRQLTK	9	33	359.2013747985379	NaN	0	359.2010192871094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VLCDRQLTK_	REV__ENSG00000143398|ENST00000368888|PIP5K1A;REV__ENSG00000186111|ENST00000335312|PIP5K1C;REV__ENST00000480546.1_1_10:95718567-95721153:-|nuORF;REV__ENST00000587482.1_1_19:3649915-3700388:-|nuORF;REV__nc|ENSG00000143398|Q99755-2|PIP5K1A;REV__nc|ENSG00000143398|Q99755-3|PIP5K1A;REV__nc|ENSG00000143398|Q99755-4|PIP5K1A;REV__nc|ENSG00000180764|A2A3N6|PIPSL;REV__nc|ENSG00000186111|O60331-2|PIP5K1C;REV__nc|ENSG00000186111|O60331-3|PIP5K1C;REV__nc|ENSG00000186111|O60331-4|PIP5K1C;REV__PIP5K1C|p.A494Gfs*44|1|0.16|ENSG00000186111|chr19:3644116-3644117|-/C|frameshift_variant	47.657333605630114	0.2228375344433429	1				NaN	NaN	0	NaN	6231	4634	10865
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10868	33.427	NaN	1282.1	30	0	175.29	0.033	+			17553	IDVKVTSM	8	51	446.743784383192	891.473015833184	2	446.7433776855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IDVKVTSM_	ENSG00000151176|ENST00000280800|PLBD2;nc|ENSG00000151176|Q8NHP8-2|PLBD2	63.53385203322761	0.46679685265839455	1				NaN	NaN	0	NaN	6232	4634	10865
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10880	33.452	NaN	4800.2	30	0	1317.9	0.214	+			40347	STTQVVGILK	10	57	523.3156958292384	1044.6168387252767	2	523.3157958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STTQVVGILK_	ENSG00000198898|ENST00000361183|CAPZA2;ENST00000426421.5_1_7:116544367-116557918:+|nuORF	101.45984612302182	0.07336148045341315	1				NaN	NaN	0	NaN	6241	4637	10879
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10881	33.456	NaN	1857.2	30	0	145.92	0.036	+			49967	WAEEGQRVL	9	55	544.2792906662979	1086.5440283993958	2	544.2800903320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WAEEGQRVL_	ENSG00000196155|ENST00000379344|PLEKHG4;ENST00000563969.5_1_16:67314567-67322708:+|nuORF;nc|ENSG00000196155|Q58EX7-2|PLEKHG4;PLEKHG4|p.L616Wfs*32|1|0.43|ENSG00000196155|chr16:67284862-67284862|G/-|frameshift_variant	65.15724298150197	0.17062369902793603	1				NaN	NaN	0	NaN	6242	4637	10879
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10892	33.481	NaN	3854.1	30	0	648.95	0.214	+			48859	VVCVEGIVTK	10	65	552.3098277211468	1102.6051025090935	2	552.3111572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_VVC(Carbamidomethyl (C))VEGIVTK_	ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3	93.5975768576971	0.11047702954938905	1				NaN	NaN	0	NaN	6250	4640	10891
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10893	33.485	NaN	2708.8	30	0	374.91	0.106	+			43305	TFTLPPVHR	9	61	534.3039454465353	1066.5933379598705	2	534.3051147460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TFTLPPVHR_	ENSG00000101220|ENST00000379772|ADISSP;nc|ENSG00000101220|Q9GZN8-2|ADISSP	42.396135135203025	0.392153681582562	1				NaN	NaN	0	NaN	6251	4640	10891
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10894	33.487	NaN	1863.2	30	0	332.1	0.106	+			40767	SVDKSVIVY	9	48	505.2823366499154	NaN	0	505.2823486328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVDKSVIVY_	ENSG00000196151|ENST00000359774|WDSUB1	56.72105179125745	0.16330365735109603	1				NaN	NaN	0	NaN	6252	4640	10891
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10895	33.488	NaN	3391	30	0	149.83	0.05				-1	 	0	75	670.0290438526097	NaN	0	670.0283203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	6253	4640	10891
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10907	33.514	NaN	2430	30	0	688.13	0.214			+	49416	VVVAVGLLGG	10	50	442.2840416742179	882.5535304152359	2	442.28387451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVVAVGLLGG_	REV__ENST00000282096.8_1_11:14665308-14793517:+|nuORF	44.53106598305862	0.5073935772121767	1				NaN	NaN	0	NaN	6262	4643	10906
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10908	33.518	NaN	17453	30	0	2656.1	0.106	+			29160	NVIRDAVTY	9	72	525.7820411112691	1049.5495292893381	2	525.78271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NVIRDAVTY_	ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2	98.58198989935565	0.04066992115528678	1				NaN	NaN	0	NaN	6263	4643	10906
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10909	33.52	NaN	2674.7	30	0	511.59	0.106	+			42556	TASESSYQL	9	56	493.2269820093247	984.4394110854494	2	493.2269287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TASESSYQL_	ENSG00000137501|ENST00000359152|SYTL2;nc|ENSG00000137501|Q9HCH5-12|SYTL2;nc|ENSG00000137501|Q9HCH5-13|SYTL2;nc|ENSG00000137501|Q9HCH5-14|SYTL2;nc|ENSG00000137501|Q9HCH5-2|SYTL2;nc|ENSG00000137501|Q9HCH5-7|SYTL2;nc|ENSG00000137501|Q9HCH5-8|SYTL2;nc|ENSG00000137501|Q9HCH5-9|SYTL2;nc|ENSG00000137501|Q9HCH5|SYTL2;SYTL2|p.Q663Tfs*35|1|0.14|ENSG00000137501|chr11:85709344-85709345|-/T|frameshift_variant	67.49366992349736	0.1516260258713357	1				NaN	NaN	0	NaN	6264	4643	10906
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10910	33.521	NaN	1673.3	30	0	184.35	0.106	+			18890	IVKEQLAAV	9	61	485.8001073826854	969.5856618321708	2	485.79901123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IVKEQLAAV_	DST|p.K5076Nfs*24|1|0.31|ENSG00000151914|chr6:56472218-56472218|T/-|frameshift_variant;DST|p.T4428Nfs*23|1|0.12|ENSG00000151914|chr6:56497896-56497897|-/T|frameshift_variant;ENSG00000151914|ENST00000680361|DST;nc|ENSG00000151914|Q03001-14|DST;nc|ENSG00000151914|Q03001-8|DST;nc|ENSG00000151914|Q03001|DST	84.9155231211612	0.07920012719736333	1				NaN	NaN	0	NaN	6265	4643	10906
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10911	33.523	NaN	1363.9	30	0	70.389	0.106	+			5800	AVIDVGINR	9	58	478.77825927734375	NaN	0	478.77825927734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVIDVGINR_	ENSG00000065911|ENST00000394053|MTHFD2;nc|ENSG00000065911|P13995-2|MTHFD2	71.87747018426188	0.0992163553043454	1				NaN	NaN	0	NaN	6266	4643	10906
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10912	33.525	NaN	1043.2	30	0	190.98	0.036	+			35481	SATFLARRH	9	46	529.7957479844216	NaN	0	529.7968139648438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SATFLARRH_	ENST00000434077.1_1_6:41885648-41888790:-|nuORF;ENST00000482361.1_1_6:41877245-41888790:-|nuORF	45.9519527083369	0.2345902329052062	1				NaN	NaN	0	NaN	6267	4643	10906
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10913	33.526	NaN	1965.2	30	0	259.04	0.139			+	24621	LGSERLLGV	9	54	472.28123559486164	942.5479182565233	2	472.27801513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LGSERLLGV_	REV__ENSG00000205268|ENST00000401827|PDE7A;REV__nc|ENSG00000205268|Q13946-2|PDE7A;REV__nc|ENSG00000205268|Q13946-3|PDE7A	53.351449002276354	0.2690372970092375	1				NaN	NaN	0	NaN	6268	4643	10906
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10924	33.553	NaN	4128	30	0	1226.8	0.214	+			5208	ATTSVITIVK	10	64	516.818232813986	1031.621912694772	2	516.8189697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATTSVITIVK_	ENSG00000198517|ENST00000343242|MAFK	37.50817390946774	0.5721060100277453	1				NaN	NaN	0	NaN	6276	4646	10923
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10925	33.556	NaN	1897.7	30	0	181.87	0.106	+			7155	DAFKASVY	8	59	450.726490803794	899.438428674388	2	450.7265319824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DAFKASVY_	ENSG00000163029|ENST00000448223|SMC6;nc|ENSG00000163029|Q96SB8-2|SMC6;SMC6|p.D983Lfs*3|1|0.06|ENSG00000163029|chr2:17670539-17670540|-/AG|frameshift_variant	74.25504064058377	0.37144338840759816	1				NaN	NaN	0	NaN	6277	4646	10923
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10926	33.558	NaN	2137	30	0	698.3	0.034			+	18406	IRVGHRAE	8	56	469.2712887445309	936.5280245558619	2	469.27020263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IRVGHRAE_	REV__ENSG00000129219|ENST00000263088|PLD2;REV__ENST00000575246.6_1_17:4711576-4721404:+|nuORF;REV__nc|ENSG00000129219|O14939-3|PLD2;REV__nc|ENSG00000129219|O14939-4|PLD2;REV__PLD2|p.R330Gfs*10|1|0.33|ENSG00000129219|chr17:4810926-4810926|C/-|frameshift_variant	35.61828744233558	0.6843154725607303	1				NaN	NaN	0	NaN	6278	4646	10923
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10937	33.583	NaN	4827.2	30	0	1101.7	0.214	+			4814	ATNTVYVFAK	10	67	557.3001238390101	1112.58569474482	2	557.3007202148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATNTVYVFAK_	ENSG00000047315|ENST00000314595|POLR2B;POLR2B|p.A362Pfs*21|1|0.34|ENSG00000047315|chr4:57005423-57005423|A/-|frameshift_variant;POLR2B|p.K211Rfs*66|1|0.1|ENSG00000047315|chr4:56995302-56995302|A/-|frameshift_variant;POLR2B|p.N1030Sfs*23|1|0.07|ENSG00000047315|chr4:57025384-57025385|-/CT|frameshift_variant;POLR2B|p.P303Tfs*5|1|0.16|ENSG00000047315|chr4:57005248-57005249|-/A|frameshift_variant	166.0711670676379	0.0049346292030699205	1				NaN	NaN	0	NaN	6286	4649	10936
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10938	33.587	NaN	2119.3	30	0	206.64	0.106	+			48981	VVGIVAAAAL	10	50	442.2840416742179	882.5535304152359	2	442.2883605957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVGIVAAAAL_	ENSG00000021645|ENST00000335750|NRXN3;ENSG00000110076|ENST00000265459|NRXN2;ENSG00000179915|ENST00000401669|NRXN1;ENST00000464307.5_1_11:64374670-64390737:-|nuORF;nc|ENSG00000021645|Q9HDB5-2|NRXN3;nc|ENSG00000021645|Q9HDB5-4|NRXN3;nc|ENSG00000021645|Q9HDB5|NRXN3;nc|ENSG00000021645|Q9Y4C0-3|NRXN3;nc|ENSG00000021645|Q9Y4C0|NRXN3;nc|ENSG00000110076|P58401|NRXN2;nc|ENSG00000110076|Q9P2S2-2|NRXN2;nc|ENSG00000179915|P58400-1|NRXN1;nc|ENSG00000179915|P58400|NRXN1;nc|ENSG00000179915|Q9ULB1-2|NRXN1;nc|ENSG00000179915|Q9ULB1-3|NRXN1;nc|ENSG00000179915|Q9ULB1-4|NRXN1;nc|ENSG00000179915|Q9ULB1|NRXN1	65.89745868150666	0.31220354485832413	1				NaN	NaN	0	NaN	6287	4649	10936
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10939	33.589	NaN	1027.8	30	0	217.3	0.033			+	44188	TRAPASAPV	9	50	435.24529096902734	NaN	0	435.2451171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TRAPASAPV_	REV__ADAM23|p.N82Ifs*87|1|0.39|ENSG00000114948|chr2:206445331-206445331|A/-|frameshift_variant;REV__ENSG00000114948|ENST00000264377|ADAM23;REV__nc|ENSG00000114948|O75077-2|ADAM23;REV__nc|ENSG00000114948|O75077-3|ADAM23	40.77816245573522	0.2702456086868081	1				NaN	NaN	0	NaN	6288	4649	10936
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10947	33.608	NaN	1321.7	30	0	86.556	0.214	+			16281	HEGLVLTKL	9	53	505.30530170067516	NaN	0	505.3053283691406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HEGLVLTKL_	ENSG00000149932|ENST00000279396|TMEM219	64.20726635412375	0.13137488984569443	1				NaN	NaN	0	NaN	6293	4652	10946
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10948	33.612	NaN	3250.8	30	0	420.73	0.106	+			28408	NESSVLHTL	9	63	500.2586719859596	998.5027910387192	2	500.2590637207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NESSVLHTL_	ENSG00000196535|ENST00000527372|MYO18A;nc|ENSG00000196535|Q92614-2|MYO18A;nc|ENSG00000196535|Q92614-3|MYO18A;nc|ENSG00000196535|Q92614-4|MYO18A	90.36981228632155	0.0638227155548745	1				NaN	NaN	0	NaN	6294	4652	10946
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10949	33.614	NaN	685.71	30	0	315.34	0.106				-1	 	0	22	362.74056169209246	723.4665704509849	2	362.7406311035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	6295	4652	10946
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10950	33.616	NaN	1958.3	30	0	225.25	0.034	+			6080	AVNALQSVY	9	52	482.75839028889004	963.5022276445801	2	482.75836181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVNALQSVY_	ENSG00000165078|ENST00000297770|CPA6	54.776311868738084	0.25715957988447635	1				NaN	NaN	0	NaN	6296	4652	10946
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10961	33.65	NaN	3313.7	30	0	735.53	0.214	+			262	AAMPGFIAK	9	52	453.24941158464543	904.4842702360909	2	453.2491455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAMPGFIAK_	ENSG00000122008|ENST00000241436|POLK;ENST00000506928.5_1_5:74842847-74879138:+|nuORF;ENST00000508867.5_1_5:74842847-74877278:+|nuORF;nc|ENSG00000122008|Q9UBT6-2|POLK;nc|ENSG00000122008|Q9UBT6-3|POLK;nc|ENSG00000122008|Q9UBT6-4|POLK;nc|ENSG00000122008|Q9UBT6-5|POLK;nc|ENSG00000122008|Q9UBT6-6|POLK;nc|ENSG00000122008|Q9UBT6-7|POLK;nc|ENSG00000122008|Q9UBT6-8|POLK;POLK|p.K571Nfs*18|1|0.29|ENSG00000122008|chr5:75596401-75596401|A/-|frameshift_variant	65.80317337860623	0.1652391959156183	1				NaN	NaN	0	NaN	6301	4658	10960
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10962	33.654	NaN	1372.1	30	0	179.51	0.035	+			20817	KIFSGVFVK	9	49	512.8126466029681	1023.6107402727363	2	512.8134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KIFSGVFVK_	ENSG00000146223|ENST00000493763|RPL7L1;ENST00000397415.7_1_6:42848808-42854199:+|nuORF;ENST00000462348.1_1_6:42848614-42854030:+|nuORF;ENST00000530523.1_1_8:42580956-42581139:-|nuORF;nc|ENSG00000146223|Q6DKI1-2|RPL7L1;RPL7L1|p.Q126Pfs*38|1|0.24|ENSG00000146223|chr6:42884698-42884699|-/C|frameshift_variant	36.446750945000026	0.4619375763483977	1				NaN	NaN	0	NaN	6302	4658	10960
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10971	33.675	NaN	4719	30	0	1631.7	0.144	+			45432	TVYEEMMAK	9	62	551.2504018330626	1100.486250732925	2	551.2517700195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVYEEMMAK_	ENSG00000144659|ENST00000650617|SLC25A38;SLC25A38|p.G301V|1|0.09|ENSG00000144659|chr3:39396507-39396507|G/T|missense_variant	115.49404669440601	0.023927554121326553	1				NaN	NaN	0	NaN	6308	4661	10970
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10981	33.699	NaN	11979	30	0	2158.9	0.214	+			10492	EVSKDAVIV	9	72	480.2737118449834	958.5328707567668	2	480.273681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EVSKDAVIV_	ENSG00000204334|ENST00000697325|ERICH2;nc|ENSG00000204334|A1L162|ERICH2	79.71258880314673	0.09879134589249085	1				NaN	NaN	0	NaN	6315	4664	10980
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10982	33.703	NaN	7395.6	30	0	1401.3	0.106			+	37169	SIVTFTVSIA	10	70	519.297145369596	1036.579737805992	2	519.2976684570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SIVTFTVSIA_	REV__ENSG00000172742|ENST00000641962|OR4D9;REV__ENSG00000176200|ENST00000313253|OR4D11;REV__ENSG00000254466|ENST00000530162|OR4D10	79.45101966838831	0.2001060845487004	1				NaN	NaN	0	NaN	6316	4664	10980
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10983	33.705	NaN	2552.3	30	0	609.31	0.106			+	33141	RERQKQAVL	9	54	564.336801159395	1126.65904938559	2	564.33740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RERQKQAVL_	REV__ENSG00000162191|ENST00000301935|UBXN1;REV__ENST00000524762.5_1_11:62445008-62446470:-|nuORF;REV__ENST00000525717.5_1_11:62445243-62446470:-|nuORF;REV__ENST00000532904.5_1_11:62445243-62446247:-|nuORF;REV__ENST00000533908.5_1_11:62445382-62446470:-|nuORF;REV__nc|ENSG00000162191|Q04323-2|UBXN1;REV__UBXN1|p.K154Rfs*5|1|0.14|ENSG00000162191|chr11:62677948-62677948|T/-|frameshift_variant	37.15910966729921	0.4535818937225704	1				NaN	NaN	0	NaN	6317	4664	10980
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10984	33.707	NaN	2815.9	30	0	264.93	0.034	+			44101	TPVGLIVSH	9	56	461.77109669375227	921.5276404543046	2	461.7712097167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TPVGLIVSH_	ENSG00000136718|ENST00000259239|IMP4;ENST00000460766.5_1_2:131100637-131104038:+|nuORF	60.97194046774394	0.20551255781574032	1				NaN	NaN	0	NaN	6318	4664	10980
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10992	33.727	NaN	10913	30	0	3327.8	0.214	+			5815	AVIGADSVTLK	11	70	537.3133744395303	1072.6121959458605	2	537.3140258789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVIGADSVTLK_	ENSG00000108651|ENST00000261708|UTP6;ENST00000477860.1_1_17:30200326-30200766:-|nuORF	131.4175700721456	0.0011899986011700767	1				NaN	NaN	0	NaN	6323	4667	10991
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10993	33.73	NaN	3346	30	0	237.54	0.106	+			47927	VSLVSKVGKQ	10	66	522.8238881168238	1043.6332233004475	2	522.824951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSLVSKVGKQ_	ENST00000456006.2_1_7:82476458-82476515:-|nuORF;nc|ENSG00000186472|Q9Y6V0-3|PCLO	28.081489160057373	0.6505064946289502	1				NaN	NaN	0	NaN	6324	4667	10991
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10994	33.732	NaN	7672.3	30	0	737.09	0.106	+			36037	SEISNIARV	9	71	494.77448025308456	987.5344075729691	2	495.27557373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEISNIARV_	ENSG00000016490|ENST00000394711|CLCA1	88.17693792209575	0.07000514020414955	1				NaN	NaN	0	NaN	6325	4667	10991
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10995	33.734	NaN	818.1	30	0	77.288	0.035			+	44532	TSVTVPRHV	9	57	498.2836608886719	NaN	0	498.2836608886719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TSVTVPRHV_	REV__ENST00000373703.4_1_1:32095783-32096005:-|nuORF	35.61828744233558	0.29773779453147337	1				NaN	NaN	0	NaN	6326	4667	10991
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11007	33.77	NaN	966.58	30	0	153.13	0.214			+	-1	AAGNLDLR	8	44	436.2350204066644	870.4554878801288	2	436.23480224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))AAGNLDLR_	REV__ENST00000424459.7_2_5:56472166-56509968:+|nuORF	44.116797842482775	0.6307669463330267	1				NaN	NaN	0	NaN	6332	4673	11006
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11008	33.773	NaN	1526.8	30	0	158.62	0.106			+	9330	EIHTESNL	8	59	471.7299096442298	941.4452663552596	2	471.7295837402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EIHTESNL_	REV__ENSG00000166049|ENST00000370357|PASD1;REV__ENST00000413236.1_1_X:150789434-150809546:+|nuORF;REV__ENST00000464219.1_1_X:150770025-150841134:+|nuORF;REV__nc|ENSG00000166049|Q8IV76-2|PASD1;REV__PASD1|p.F108C|1|0.7|ENSG00000166049|chrX:151621497-151621497|T/G|missense_variant;REV__PASD1|p.N139Tfs*3|1|0.05|ENSG00000166049|chrX:151621589-151621590|-/CTTT|frameshift_variant;REV__PASD1|p.N589Tfs*62|1|0.39|ENSG00000166049|chrX:151672508-151672508|A/-|frameshift_variant;REV__PASD1|p.V650Rfs*13|1|0.16|ENSG00000166049|chrX:151673952-151673953|-/C|frameshift_variant	27.882242232435846	0.7440473649773525	1				NaN	NaN	0	NaN	6333	4673	11006
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11009	33.775	NaN	1784.2	30	0	451.43	0.035			+	38327	SRGNATMTY	9	49	500.72961080916457	999.4446686851292	2	500.72930908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SRGNATMTY_	REV__ENSG00000163520|ENST00000404922|FBLN2;REV__nc|ENSG00000163520|P98095|FBLN2	45.97224482568171	0.3502073465782774	1				NaN	NaN	0	NaN	6334	4673	11006
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11020	33.8	NaN	3125.1	30	0	221.74	0.214			+	28184	NAQKLATL	8	59	429.7551438625166	857.4957347918332	2	429.7554016113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAQKLATL_	REV__tr|U7SRU9|U7SRU9_FUSNUCobaltABCtransporter,permeaseCbiQOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01438PE=4SV=1	51.33545320467046	0.5859736979383976	1				NaN	NaN	0	NaN	6342	4676	11019
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11021	33.804	NaN	1562.6	30	0	132.88	0.035	+			51389	YTNGKCVIL	9	61	505.77002889767147	1009.525504862143	2	505.76983642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YTNGKCVIL_	ENSG00000071127|ENST00000499869|WDR1;ENST00000509600.1_1_4:10117520-10118290:-|nuORF;ENST00000514319.5_1_4:10110004-10118075:-|nuORF;nc|ENSG00000071127|O75083-3|WDR1	40.77816245573522	0.41113185337114944	1				NaN	NaN	0	NaN	6343	4676	11019
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11027	33.82	NaN	5099.9	30	0	688.97	0.214	+			23474	LAEVGRVL	8	52	428.76577623620096	855.516999539202	2	428.7659912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LAEVGRVL_	ENSG00000010165|ENST00000361735|METTL13;METTL13|p.L636Pfs*8|1|0.12|ENSG00000010165|chr1:171796557-171796558|-/C|frameshift_variant;nc|ENSG00000010165|Q8N6R0-1|METTL13;nc|ENSG00000010165|Q8N6R0-2|METTL13;nc|ENSG00000010165|Q8N6R0-3|METTL13;nc|ENSG00000010165|Q8N6R0-4|METTL13	82.24051045832904	0.30490469762271794	1				NaN	NaN	0	NaN	6346	4679	11026
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11028	33.824	NaN	3897.2	30	0	621.69	0.106	+			35475	SATETCYTY	9	67	519.7074462011541	1037.400339469108	2	519.7080688476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SATETCYTY_	ENSG00000132465|ENST00000254801|JCHAIN	60.97194046774394	0.20551255781574032	1				NaN	NaN	0	NaN	6347	4679	11026
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11029	33.826	NaN	1457.3	30	0	386.57	0.035	+			47530	VQRQCMKL	8	55	503.2717699934944	1004.5289870537888	2	503.2717590332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VQRQCMKL_	ENSG00000009413|ENST00000368802|REV3L;ENST00000462119.5_1_6:111628768-111636625:-|nuORF;nc|ENSG00000009413|O60673-2|REV3L	50.0245360154114	0.5941082100236891	1				NaN	NaN	0	NaN	6348	4679	11026
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11037	33.845	NaN	1440.4	30	0	100.8	0.214			+	11050	FENGLSLTY	9	60	522.2557174550343	1042.4968819768685	2	522.2571411132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FENGLSLTY_	REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-10|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-13|TTN;REV__nc|ENSG00000155657|Q8WZ42-2|TTN;REV__nc|ENSG00000155657|Q8WZ42-3|TTN;REV__nc|ENSG00000155657|Q8WZ42-4|TTN;REV__nc|ENSG00000155657|Q8WZ42-5|TTN;REV__nc|ENSG00000155657|Q8WZ42-7|TTN;REV__nc|ENSG00000155657|Q8WZ42-8|TTN;REV__nc|ENSG00000155657|Q8WZ42-9|TTN;REV__nc|ENSG00000155657|Q8WZ42|TTN	39.252832667884924	0.4290233611298554	1				NaN	NaN	0	NaN	6353	4682	11036
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11038	33.849	NaN	1695.1	30	0	183.14	0.106	+			31797	QPMEVQEGY	9	53	540.7368495589601	1079.45914618472	2	540.7374877929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QPMEVQEGY_	ENSG00000130726|ENST00000253024|TRIM28;ENST00000601150.5_1_19:59059168-59060232:+|nuORF;nc|ENSG00000130726|Q13263-2|TRIM28	45.97224482568171	0.3502073465782774	1				NaN	NaN	0	NaN	6354	4682	11036
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11039	33.851	NaN	1495.8	30	0	189.48	0.106	+			28905	NQPNGGKLF	9	66	487.7561363608766	NaN	0	487.7566223144531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NQPNGGKLF_	ENSG00000083814|ENST00000317398|ZNF671	45.9519527083369	0.2345902329052062	1				NaN	NaN	0	NaN	6355	4682	11036
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11040	33.853	NaN	6247.8	30	0	4060.7	0.106	+			5985	AVLSWKLAK	9	34	339.21470650011656	1014.6222901005497	3	339.21514892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVLSWKLAK_	ENSG00000188725|ENST00000339020|SMIM15;SMIM15|p.M47T|1|0.4|ENSG00000188725|chr5:61160032-61160032|A/G|missense_variant	26.79610172149135	0.5528238334041078	1				NaN	NaN	0	NaN	6356	4682	11036
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11041	33.855	NaN	1729.4	30	0	162.54	0.037	+			47341	VPDSSGPERIL	11	63	585.3114745144642	1168.6083960957283	2	585.8131103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VPDSSGPERIL_	ENSG00000165119|ENST00000376263|HNRNPK;nc|ENSG00000165119|P61978-3|HNRNPK;nc|ENSG00000165119|P61978|HNRNPK	35.17822180527639	0.6208003396870814	1				NaN	NaN	0	NaN	6357	4682	11036
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11053	33.88	NaN	1880.3	30	0	169.73	0.214	+			29161	NVIRDAVTY	9	61	525.7820411112691	1049.5495292893381	2	525.7825317382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NVIRDAVTY_	ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2	85.16082228582465	0.07850854922700509	1				NaN	NaN	0	NaN	6366	4685	11052
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11054	33.884	NaN	1509.3	30	0	200.4	0.106	+			480	AAYDSLVVGK	10	57	511.7798767089844	NaN	0	511.7798767089844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAYDSLVVGK_	ENSG00000128283|ENST00000249014|CDC42EP1;nc|ENSG00000128283|Q00587-2|CDC42EP1	56.43379154798735	0.2634004003759929	1				NaN	NaN	0	NaN	6367	4685	11052
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11055	33.886	NaN	1743.4	30	0	264.36	0.106	+			12499	GEEKLIASV	9	60	473.26577983488534	944.5170067365707	2	473.265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEEKLIASV_	ENSG00000130713|ENST00000372358|EXOSC2;ENST00000430138.6_1_9:133569178-133570981:+|nuORF;ENST00000463488.1_1_9:133569202-133574940:+|nuORF;ENST00000491115.6_1_9:133569178-133574746:+|nuORF;nc|ENSG00000130713|Q13868-2|EXOSC2;nc|ENSG00000130713|Q13868-3|EXOSC2	80.45461616416974	0.09558281504443908	1				NaN	NaN	0	NaN	6368	4685	11052
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11056	33.887	NaN	2937.9	30	0	335.96	0.106	+			50626	YEAVREVL	8	56	489.7665151955855	977.518477457971	2	489.7655029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YEAVREVL_	ENSG00000198755|ENST00000322203|RPL10A;ENST00000464112.5_1_6:35436546-35438524:+|nuORF;ENST00000467020.5_1_6:35436211-35436817:+|nuORF;ENST00000472730.1_1_3:61728131-61728755:-|nuORF;ENST00000490335.4_1_6:35436211-35436651:+|nuORF;RPL10A|p.P135Lfs*17|1|0.35|ENSG00000198755|chr6:35470270-35470270|C/-|frameshift_variant	65.46538089061403	0.44767499471257033	1				NaN	NaN	0	NaN	6369	4685	11052
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11057	33.889	NaN	680.4	30	0	72.143	0.033	+			35427	SARVTLAK	8	43	423.2654518195963	844.5163507059926	2	423.2659606933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SARVTLAK_	ENST00000377424.8_1_1:9129622-9129694:-|nuORF	42.396135135203025	0.6414440140393314	1				NaN	NaN	0	NaN	6370	4685	11052
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11069	33.926	NaN	1350.5	30	0	183.6	0.214			+	-1	LDIPMKGK	8	46	459.2599496437434	916.5053463542869	2	459.2594299316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LDIPM(Oxidation (M))KGK_	REV__ENSG00000105419|ENST00000558555|MEIS3;REV__ENSG00000134138|ENST00000561208|MEIS2;REV__ENSG00000143995|ENST00000272369|MEIS1;REV__ENST00000466811.2_1_2:66668130-66681852:+|nuORF;REV__ENST00000491706.5_1_2:66667732-66670276:+|nuORF;REV__ENST00000561163.5_1_15:37328933-37390391:-|nuORF;REV__ENST00000561204.5_1_19:47909736-47921444:-|nuORF;REV__MEIS1|p.S259Afs*24|1|0.2|ENSG00000143995|chr2:66512176-66512176|C/-|frameshift_variant;REV__MEIS2|p.K275Nfs*12|1|0.27|ENSG00000134138|chr15:37036889-37036889|T/-|frameshift_variant;REV__nc|ENSG00000105419|Q99687-2|MEIS3;REV__nc|ENSG00000105419|Q99687-3|MEIS3;REV__nc|ENSG00000134138|O14770-2|MEIS2;REV__nc|ENSG00000134138|O14770-3|MEIS2;REV__nc|ENSG00000134138|O14770-4|MEIS2;REV__nc|ENSG00000134138|O14770-5|MEIS2;REV__nc|ENSG00000134138|O14770-6|MEIS2;REV__nc|ENSG00000134138|O14770-7|MEIS2;REV__nc|ENSG00000134138|O14770-8|MEIS2;REV__nc|ENSG00000143995|O00470-2|MEIS1;REV__nc|ENSG00000179277|A6NDR6|MEIS3P1;REV__nc|ENSG00000188013|A8K0S8|MEIS3P2	25.450171626174864	0.7628259754767981	1				NaN	NaN	0	NaN	6376	4691	11068
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11070	33.93	NaN	1462.2	30	0	150.32	0.034	+			47716	VSFLNVTK	8	53	454.2658017737739	NaN	0	454.26513671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSFLNVTK_	ENSG00000144010|ENST00000639673|TRIM43B;ENSG00000144015|ENST00000272395|TRIM43	47.657333605630114	1.7418937515398478	1				NaN	NaN	0	NaN	6377	4691	11068
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11076	33.946	NaN	2280.3	30	0	225.33	0.141	+			3043	ASFILGTGK	9	46	447.2583142249885	892.502075516777	2	447.2586975097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASFILGTGK_	CDCA2|p.N847Mfs*14|1|0.15|ENSG00000184661|chr8:25507200-25507200|A/-|frameshift_variant;ENSG00000184661|ENST00000330560|CDCA2;nc|ENSG00000184661|Q69YH5-2|CDCA2	61.691277971877994	0.19951612995419254	1				NaN	NaN	0	NaN	6380	4694	11075
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11083	33.966	NaN	1468.1	30	0	140.23	0.214			+	-1	EPIDRGTY	8	54	496.73784262020007	991.4611323072002	2	496.7380065917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))EPIDRGTY_	REV__ENSG00000107186|ENST00000319217|MPDZ;REV__ENST00000539508.5_1_9:13136054-13190160:-|nuORF;REV__MPDZ|p.F1114L|1|0.32|ENSG00000107186|chr9:13162708-13162708|A/C|missense_variant;REV__MPDZ|p.K1582Rfs*7|1|0.22|ENSG00000107186|chr9:13125278-13125278|T/-|frameshift_variant;REV__nc|ENSG00000107186|O75970-2|MPDZ;REV__nc|ENSG00000107186|O75970-3|MPDZ;REV__nc|ENSG00000107186|O75970-5|MPDZ	42.47446043378293	0.6409579893742323	1				NaN	NaN	0	NaN	6384	4697	11082
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11084	33.97	NaN	2028.3	30	0	234.48	0.033	+			26062	LSLQSVPL	8	49	428.76056871620557	855.5065844992112	2	428.76116943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSLQSVPL_	ENSG00000139445|ENST00000299162|FOXN4;nc|ENSG00000139445|Q96NZ1-3|FOXN4	79.45101966838831	0.3281480470254892	1				NaN	NaN	0	NaN	6385	4697	11082
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11095	33.995	NaN	4335.2	30	0	2747.4	0.215	+			41279	SVLLFVTKK	9	32	345.5584200519414	1033.6534307560244	3	345.55859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVLLFVTKK_	ENSG00000198231|ENST00000389924|DDX42;ENST00000578593.1_1_17:61889231-61895755:+|nuORF;nc|ENSG00000198231|Q86XP3-2|DDX42	33.921630207806714	0.48623198279849766	1				NaN	NaN	0	NaN	6393	4700	11094
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11096	33.999	NaN	2129.9	30	0	251.75	0.106	+			45249	TVQELAIYK	9	62	532.8036408989421	1063.5927288646842	2	532.8042602539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVQELAIYK_	ENSG00000102595|ENST00000376747|UGGT2;nc|ENSG00000102595|Q9NYU1-2|UGGT2;UGGT2|p.N1268Ifs*10|1|0.3|ENSG00000102595|chr13:95859613-95859613|T/-|frameshift_variant	66.96192283764107	0.15557981141143568	1				NaN	NaN	0	NaN	6394	4700	11094
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11097	34.001	NaN	779.42	30	0	170.25	0.106	+			25104	LLPKAPPL	8	34	424.7838804207067	847.5532079082134	2	424.7838439941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LLPKAPPL_	ENSG00000135414|ENST00000257868|GDF11;ENSG00000138379|ENST00000260950|MSTN;MSTN|p.K153Ffs*44|1|0.05|ENSG00000138379|chr2:190060352-190060353|-/GAAA|frameshift_variant	21.70233525837049	0.7917639344264583	1				NaN	NaN	0	NaN	6395	4700	11094
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11098	34.003	NaN	1383	30	0	361.94	0.106			+	10189	ETAVLGNLL	9	57	465.268932795809	928.523312658418	2	465.26885986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ETAVLGNLL_	REV__ENSG00000249222|ENST00000505920|ATP5MGL	68.78682469695295	0.14603441672067394	1				NaN	NaN	0	NaN	6396	4700	11094
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11099	34.004	NaN	1569.1	30	0	112.24	0.106	+			30670	QAYSGIQQY	9	56	529.2510772974086	1056.4876016616172	2	529.75439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QAYSGIQQY_	CELF2|p.A423Gfs*31|1|0.4|ENSG00000048740|chr10:11325842-11325843|-/G|frameshift_variant;ENSG00000048740|ENST00000633077|CELF2;ENSG00000149187|ENST00000687097|CELF1;nc|ENSG00000048740|O95319-2|CELF2;nc|ENSG00000048740|O95319-3|CELF2;nc|ENSG00000048740|O95319-4|CELF2;nc|ENSG00000048740|O95319-5|CELF2;nc|ENSG00000048740|O95319|CELF2;nc|ENSG00000149187|Q92879-2|CELF1;nc|ENSG00000149187|Q92879-3|CELF1;nc|ENSG00000149187|Q92879-4|CELF1;nc|ENSG00000149187|Q92879-5|CELF1;nc|ENSG00000149187|Q92879-6|CELF1;nc|ENSG00000149187|Q92879|CELF1	58.22992032128504	0.22837015374068087	1				NaN	NaN	0	NaN	6397	4700	11094
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11100	34.006	NaN	673.03	30	0	65.804	0.034			+	-1	AYAMAVVAL	9	47	462.74749755859375	NaN	0	462.74749755859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_AYAM(Oxidation (M))AVVAL_	REV__ENSG00000007314|ENST00000435607|SCN4A;REV__SCN4A|p.D1309Tfs*4|1|0.19|ENSG00000007314|chr17:63943842-63943842|C/-|frameshift_variant;REV__SCN4A|p.E974Rfs*5|1|0.4|ENSG00000007314|chr17:63949462-63949463|-/G|frameshift_variant	39.021493756699265	0.2805557132942146	1				NaN	NaN	0	NaN	6398	4700	11094
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11101	34.007	NaN	898.17	30	0	167.36	0.139			+	4599	ATLHYLLS	8	51	459.2596740722656	NaN	0	459.2596740722656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATLHYLLS_	REV__ENSG00000104870|ENST00000221466|FCGRT;REV__ENST00000452439.1_1_19:50016657-50027781:+|nuORF;REV__ENST00000595881.1_1_19:50017122-50017545:+|nuORF;REV__ENST00000598936.1_1_19:50016657-50017545:+|nuORF;REV__FCGRT|p.G107Efs*29|1|0.3|ENSG00000104870|chr19:49514123-49514123|G/-|frameshift_variant	40.5726180659479	1.7418937515398478	1				NaN	NaN	0	NaN	6399	4700	11094
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11108	34.026	NaN	4845.7	30	0	1059.9	0.214	+			42871	TEGYQPPPV	9	56	494.2431273084993	986.4717016837986	2	494.2430114746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEGYQPPPV_	ENSG00000108639|ENST00000225777|SYNGR2;ENST00000592456.1_1_17:76167504-76168014:+|nuORF	101.25262130126117	0.03792372629710479	1				NaN	NaN	0	NaN	6403	4703	11107
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11109	34.03	NaN	1855.5	30	0	165.35	0.106	+			8473	EASKLVMSY	9	53	514.2600145469631	1026.5054761607262	2	514.2607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EASKLVMSY_	ENSG00000128641|ENST00000392318|MYO1B;ENSG00000166866|ENST00000300119|MYO1A;ENST00000471904.1_1_2:192128111-192215016:+|nuORF;MYO1B|p.A603Sfs*37|1|0.42|ENSG00000128641|chr2:191390310-191390311|-/A|frameshift_variant;MYO1B|p.F948Cfs*47|1|0.41|ENSG00000128641|chr2:191411140-191411141|-/TG|frameshift_variant;MYO1B|p.S730Afs*4|2|0.4|ENSG00000128641|chr2:191393178-191393178|A/-|frameshift_variant;nc|ENSG00000128641|O43795-2|MYO1B	68.78682469695295	0.14603441672067394	1				NaN	NaN	0	NaN	6404	4703	11107
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11110	34.032	NaN	2476.5	30	0	481.22	0.106				-1	VSIACLLLG	9	58	473.2751845864742	944.5358162397484	2	473.7771911621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_VSIAC(Carbamidomethyl (C))LLLG_	ENST00000486339.6_1_16:2156986-2157277:-|nuORF	50.0245360154114	0.3026755932229825	1				NaN	NaN	0	NaN	6405	4703	11107
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11111	34.034	NaN	2959.8	30	0	390.34	0.037				-1	SCRGSVKALC	10	64	569.2769448218193	1136.5393367104384	2	569.2780151367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_SC(Carbamidomethyl (C))RGSVKALC(Carbamidomethyl (C))_	ENST00000328916.7_1_12:7167858-7168176:+|nuORF	27.882242232435846	0.6521336255503853	1				NaN	NaN	0	NaN	6406	4703	11107
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11120	34.066	NaN	2855.4	30	0	534.72	0.142			+	8307	EAISAIAKI	9	50	458.2790871942269	914.5436214552539	2	458.2791748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EAISAIAKI_	REV__ENSG00000085276|ENST00000651503|MECOM;REV__ENSG00000142611|ENST00000270722|PRDM16;REV__MECOM|p.G611Efs*33|1|0.39|ENSG00000085276|chr3:169115476-169115476|C/-|frameshift_variant;REV__MECOM|p.G614Efs*30|5|0.4|ENSG00000085276|chr3:169115469-169115469|T/-|frameshift_variant;REV__MECOM|p.P513Qfs*15|2|0.39|ENSG00000085276|chr3:169115772-169115772|A/-|frameshift_variant;REV__MECOM|p.V498Sfs*27|1|0.34|ENSG00000085276|chr3:169115816-169115817|-/T|frameshift_variant;REV__nc|ENSG00000085276|Q03112-1|MECOM;REV__nc|ENSG00000085276|Q03112-4|MECOM;REV__nc|ENSG00000085276|Q03112-5|MECOM;REV__nc|ENSG00000085276|Q03112-6|MECOM;REV__nc|ENSG00000085276|Q03112-8|MECOM;REV__nc|ENSG00000085276|Q03112|MECOM;REV__nc|ENSG00000142611|Q9HAZ2-2|PRDM16;REV__nc|ENSG00000142611|Q9HAZ2-3|PRDM16;REV__nc|ENSG00000142611|Q9HAZ2-4|PRDM16	45.97224482568171	0.3502073465782774	1				NaN	NaN	0	NaN	6409	4709	11119
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11125	34.083	NaN	5395.5	30	0	998.45	0.214	+			24328	LFINESAK	8	59	461.2553647702448	920.4961766072896	2	461.2560119628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LFINESAK_	CON__P34955	94.00642277110589	0.2653416297186628	1				NaN	NaN	0	NaN	6411	4712	11124
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11126	34.086	NaN	1542.5	30	0	242.9	0.034			+	7718	DLSILGLIAG	10	54	486.29254150390625	NaN	0	486.29254150390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DLSILGLIAG_	REV__ENSG00000212807|ENST00000641810|OR2A42;REV__ENSG00000221970|ENST00000641044|OR2A1;REV__OR2A1|p.V68Sfs*30|1|0.04|ENSG00000221970|chr7:144318325-144318325|C/-|frameshift_variant	53.351449002276354	0.2844141321977336	1				NaN	NaN	0	NaN	6412	4712	11124
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11134	34.106	NaN	2931	30	0	737.56	0.214			+	43310	TFVPVQPMI	9	61	524.2794744768049	1046.5443960204097	2	524.281982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_TFVPVQPM(Oxidation (M))I_	REV__ENSG00000027697|ENST00000367739|IFNGR1;REV__ENST00000478333.1_1_6:137528098-137540521:-|nuORF;REV__IFNGR1|p.E233Rfs*9|1|0.1|ENSG00000027697|chr6:137203535-137203536|-/T|frameshift_variant;REV__IFNGR1|p.I127Lfs*16|1|0.38|ENSG00000027697|chr6:137204499-137204499|T/-|frameshift_variant;REV__IFNGR1|p.S280Afs*2|1|0.34|ENSG00000027697|chr6:137200904-137200904|T/-|frameshift_variant;REV__nc|ENSG00000027697|P15260-2|IFNGR1	68.78682469695295	0.14603441672067394	1				NaN	NaN	0	NaN	6417	4715	11133
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11135	34.11	NaN	2450.5	30	0	367.21	0.033	+			1171	AENIPNLP	8	56	434.23145089321497	866.44834885323	2	434.2318420410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AENIPNLP_	ENSG00000138032|ENST00000282412|PPM1B;ENST00000488866.1_1_2:44445059-44445709:+|nuORF;nc|ENSG00000138032|O75688-2|PPM1B;nc|ENSG00000138032|O75688-3|PPM1B;nc|ENSG00000138032|O75688-4|PPM1B	38.80614096846853	0.6637206697844082	1				NaN	NaN	0	NaN	6418	4715	11133
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11151	34.151	NaN	7672.6	30	0	1596.2	0.214	+			5760	AVGLVLPAK	9	55	434.28654110488776	866.5585292765755	2	434.2862854003906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVGLVLPAK_	ENSG00000162496|ENST00000616661|DHRS3;nc|ENSG00000162496|O75911-2|DHRS3	76.84663266511073	0.11118375776443899	1				NaN	NaN	0	NaN	6428	4721	11150
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11152	34.155	NaN	3023.5	30	0	292.91	0.035	+			41138	SVIVQPFSK	9	62	502.79211659898954	1003.5696802647791	2	502.7918395996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVIVQPFSK_	ENSG00000137871|ENST00000267807|ZNF280D;nc|ENSG00000285253|Q6N043-2|ZNF280D;nc|ENSG00000285253|Q6N043-3|ZNF280D;nc|ENSG00000285253|Q6N043-6|ZNF280D	45.02220120713402	0.3613509778819777	1				NaN	NaN	0	NaN	6429	4721	11150
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11163	34.179	NaN	1257	30	0	255.59	0.214	+			26224	LSSLGCPKV	9	47	452.250431377895	902.48630982259	2	452.25	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSSLGCPKV_	ENST00000361781.6_1_10:52220521-52220566:-|nuORF	30.503639358989545	0.5181749237905803	1				NaN	NaN	0	NaN	6437	4724	11162
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11164	34.182	NaN	779.17	30	0	186.78	0.106			+	11433	FLVAAVSG	8	31	382.2209167480469	NaN	0	382.2209167480469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FLVAAVSG_	REV__ENSG00000205592|ENST00000454784|MUC19;REV__nc|ENSG00000205592|Q7Z5P9-2|MUC19	44.53106598305862	1.7418937515398478	1				NaN	NaN	0	NaN	6438	4724	11162
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11165	34.184	NaN	1393.9	30	0	135.77	0.106				-1	AVCSDFFNK	9	60	544.248234272146	NaN	0	544.2486572265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_AVC(Carbamidomethyl (C))SDFFNK_	ENSG00000164941|ENST00000523731|INTS8;ENST00000523352.1_1_8:95884148-95885795:+|nuORF;INTS8|p.V871M|1|0.36|ENSG00000164941|chr8:94873451-94873451|G/A|missense_variant;nc|ENSG00000164941|Q75QN2-2|INTS8	26.69291269510374	0.34280015626154364	1				NaN	NaN	0	NaN	6439	4724	11162
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11166	34.186	NaN	1442.7	30	0	81.732	0.106			+	9432	EKKNGMPDY	9	59	541.2529907226562	NaN	0	541.2529907226562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EKKNGMPDY_	REV__ENSG00000150873|ENST00000381585|C2orf50	32.81241826257853	0.3119040447479903	1				NaN	NaN	0	NaN	6440	4724	11162
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11167	34.188	NaN	1000.9	30	0	98.959	0.106			+	-1	RCMTFLIELH	10	48	660.3358764648438	NaN	0	660.3358764648438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_RC(Carbamidomethyl (C))MTFLIELH_	REV__ENSG00000133704|ENST00000256079|IPO8;REV__nc|ENSG00000133704|O15397-2|IPO8	37.81151784470057	0.3760215235790741	1				NaN	NaN	0	NaN	6441	4724	11162
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11168	34.19	NaN	1660.8	30	0	556.56	0.036	+			38769	SSLYIILKK	9	34	355.56165800448105	1063.6631446136432	3	355.56207275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSLYIILKK_	ENSG00000155561|ENST00000285968|NUP205	24.519189625965996	0.574102787014149	1				NaN	NaN	0	NaN	6442	4724	11162
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11169	34.19	NaN	1319.8	30	0	160.92	0.142	+			28744	NPADSISHVAY	11	57	587.2800229787493	1172.5454930242986	2	587.7824096679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NPADSISHVAY_	ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;TRRAP-ASNS|1|fusion;TRRAP-ASNS|2|fusion;TRRAP|p.A1620Cfs*35|1|0.27|ENSG00000196367|chr7:98949499-98949500|-/G|frameshift_variant;TRRAP|p.K3443Sfs*19|1|0.28|ENSG00000196367|chr7:99004246-99004246|A/-|frameshift_variant;TRRAP|p.P1292Lfs*17|1|0.44|ENSG00000196367|chr7:98933258-98933258|C/-|frameshift_variant;TRRAP|p.P1360Afs*14|1|0.05|ENSG00000196367|chr7:98935641-98935642|-/GCAAATAA|frameshift_variant	35.15202426646627	0.6210751305041943	1				NaN	NaN	0	NaN	6443	4724	11162
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11179	34.214	NaN	9501.5	30	0	1970.3	0.144			+	45559	TYLKDGLLK	9	78	525.8131793366056	1049.611805740011	2	525.8135986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TYLKDGLLK_	REV__ENSG00000154822|ENST00000615277|PLCL2;REV__nc|ENSG00000154822|Q9UPR0-2|PLCL2;REV__nc|ENSG00000154822|Q9UPR0-3|PLCL2;REV__PLCL2|p.D812*|1|0.26|ENSG00000154822|chr3:17011774-17011775|-/T|frameshift_variant;REV__PLCL2|p.E599Rfs*11|1|0.38|ENSG00000154822|chr3:17011137-17011137|A/-|frameshift_variant	70.8162118820467	0.13725933411854815	1				NaN	NaN	0	NaN	6450	4727	11178
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11185	34.232	NaN	2457.6	30	0	506.77	0.143	+			8171	EAANTMVNY	9	57	506.72377845329976	1011.4330039733995	2	506.72357177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EAANTMVNY_	ENSG00000011304|ENST00000356948|PTBP1;ENST00000586944.5_1_19:797434-805231:+|nuORF;nc|ENSG00000011304|P26599-1|PTBP1;nc|ENSG00000011304|P26599-2|PTBP1	79.71258880314673	0.09879134589249085	1				NaN	NaN	0	NaN	6453	4730	11184
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11195	34.258	NaN	2981.8	30	0	730.38	0.142			+	46684	VGHYIAEY	8	56	476.2322835815463	950.4500142298926	2	476.2318420410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VGHYIAEY_	REV__ENSG00000135220|ENST00000251566|UGT2A3;REV__ENSG00000173610|ENST00000286604|UGT2A1;REV__ENSG00000271271|ENST00000604629|UGT2A2;REV__nc|ENSG00000173610|P0DTE4-1|UGT2A1;REV__nc|ENSG00000173610|P0DTE4-4|UGT2A1;REV__nc|ENSG00000271271|P0DTE5-2|UGT2A2	39.021493756699265	0.6623843612266921	1				NaN	NaN	0	NaN	6460	4733	11194
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11214	34.316	NaN	1462.9	30	0	150.77	0.214			+	25974	LSISNLIP	8	48	428.76056871620557	855.5065844992112	2	428.7610778808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSISNLIP_	REV__ENST00000412730.1_1_7:47803058-47803148:+|nuORF;REV__tr|U7SYR5|U7SYR5_FUSNUAAA+ATPasedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00888PE=3SV=1	51.33545320467046	0.5859736979383976	1				NaN	NaN	0	NaN	6470	4742	11213
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11215	34.32	NaN	1087.2	30	0	81.469	0.036	+			22219	KSVKGLTYTP	10	54	547.317228823252	NaN	0	547.3173217773438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KSVKGLTYTP_	tr|U7T6T2|U7T6T2_FUSNUAutotransporterdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00158PE=4SV=1	31.634271133179894	0.39630454568332174	1				NaN	NaN	0	NaN	6471	4742	11213
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11221	34.336	NaN	6486.6	30	0	562.15	0.214	+			8370	EALSLAHTY	9	65	502.75624097088644	1003.4979290085729	2	502.7563781738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EALSLAHTY_	ENSG00000151779|ENST00000281513|NBAS;NBAS|p.L1365Ifs*4|1|0.13|ENSG00000151779|chr2:15352075-15352078|AAAG/-|frameshift_variant;NBAS|p.N1064Tfs*12|1|0.31|ENSG00000151779|chr2:15394293-15394293|T/-|frameshift_variant;NBAS|p.Y1476Mfs*33|1|0.28|ENSG00000151779|chr2:15328234-15328234|A/-|frameshift_variant;nc|ENSG00000151779|A2RRP1-2|NBAS	68.78682469695295	0.14603441672067394	1				NaN	NaN	0	NaN	6474	4745	11220
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11222	34.339	NaN	1996.3	30	0	691.5	0.036			+	25045	LLIVAPQDPN	10	50	540.308810900943	1078.6030688686858	2	540.3097534179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LLIVAPQDPN_	REV__ENSG00000198677|ENST00000358746|SKIC3	19.996771675451527	0.7148376616046445	1				NaN	NaN	0	NaN	6475	4745	11220
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11228	34.356	NaN	1365.9	30	0	161.31	0.144	+			34026	RSLDNFFAK	9	45	549.2916027102724	NaN	0	549.2924194335938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RSLDNFFAK_	ENSG00000091527|ENST00000264993|CDV3;nc|ENSG00000091527|Q9UKY7-2|CDV3	33.921630207806714	0.3063038642147651	1				NaN	NaN	0	NaN	6478	4748	11227
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11233	34.372	NaN	1927.2	30	0	218.2	0.214			+	27913	MTVKMGIDE	9	54	512.2458873363526	1022.4772217395051	2	512.2464599609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MTVKMGIDE_	REV__tr|U7T8R5|U7T8R5_FUSNUPeptidaseM20domain-containingprotein2OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00140PE=3SV=1	47.95952297671804	0.32689736945648856	1				NaN	NaN	0	NaN	6480	4751	11232
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11234	34.376	NaN	1227.9	30	0	136.85	0.106			+	26741	LVLVNELGI	9	52	485.30282949594056	NaN	0	485.3034973144531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LVLVNELGI_	REV__ENSG00000114650|ENST00000265565|SCAP;REV__nc|ENSG00000114650|Q12770-3|SCAP	37.15910966729921	0.2899585034171616	1				NaN	NaN	0	NaN	6481	4751	11232
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11235	34.378	NaN	1439.7	30	0	102.74	0.037	+			28844	NPVDWKEQY	9	62	589.7776213067634	1177.5406896803268	2	589.7791137695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NPVDWKEQY_	ENSG00000106397|ENST00000223127|PLOD3;ENST00000460132.5_1_7:100853286-100853899:-|nuORF	51.19269402634007	0.2889735674168909	1				NaN	NaN	0	NaN	6482	4751	11232
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11242	34.396	NaN	1610.9	30	0	446.91	0.143	+			31969	QQVLQLSL	8	46	464.7769040628796	927.5392551925593	2	464.7777404785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QQVLQLSL_	ENSG00000076513|ENST00000261739|ANKRD13A	37.15910966729921	0.6739408393984688	1				NaN	NaN	0	NaN	6486	4754	11241
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11248	34.414	NaN	4768.7	30	0	484.69	0.142	+			5242	ATVAVPLVGK	10	62	477.8026472330134	953.5907415328268	2	477.8029479980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATVAVPLVGK_	ENSG00000136986|ENST00000259512|DERL1;nc|ENSG00000136986|Q9BUN8-2|DERL1	77.31757898189308	0.2175361111083648	1				NaN	NaN	0	NaN	6489	4757	11247
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11253	34.431	NaN	2718.5	30	0	251.7	0.214	+			35830	SEDDVKMAL	9	68	504.2394304188247	1006.4643079044495	2	504.24005126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEDDVKMAL_	ENSG00000169813|ENST00000682386|HNRNPF	87.69643885390035	0.07135982304947239	1				NaN	NaN	0	NaN	6491	4760	11252
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11254	34.435	NaN	2767.6	30	0	449.28	0.106	+			47848	VSLDYAISK	9	67	498.2741050376043	994.5336571420086	2	498.2745666503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSLDYAISK_	ENSG00000181220|ENST00000458143|ZNF746;ENSG00000204946|ENST00000434415|ZNF783;ENST00000472212.5_1_7:149248897-149318218:-|nuORF;ENST00000481762.5_1_7:149260692-149318218:-|nuORF;ENST00000486492.5_1_7:149255763-149318218:-|nuORF;ENST00000493198.5_1_7:149316940-149318218:-|nuORF;nc|ENSG00000181220|Q6NUN9-2|ZNF746;nc|ENSG00000181220|Q6NUN9|ZNF746;nc|ENSG00000204946|Q6ZMS7-1|ZNF783	114.8945686534367	0.024290463251177924	1				NaN	NaN	0	NaN	6492	4760	11252
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11255	34.437	NaN	1239.3	30	0	167.78	0.106	+			14561	GTFLEGVAK	9	45	461.2553647702448	920.4961766072896	2	461.2557373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTFLEGVAK_	ENSG00000174886|ENST00000308961|NDUFA11;ENST00000593233.1_1_19:5894755-5901370:-|nuORF;nc|ENSG00000174886|Q86Y39-2|NDUFA11	30.317721548370564	0.5199124245378496	1				NaN	NaN	0	NaN	6493	4760	11252
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11256	34.438	NaN	1913.6	30	0	219.48	0.035	+			49254	VVNVSPYLK	9	60	509.8004089306012	NaN	0	509.8022155761719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVNVSPYLK_	ENSG00000167861|ENST00000425042|HID1;HID1|p.P773Lfs*8|1|0.17|ENSG00000167861|chr17:74951619-74951619|G/-|frameshift_variant;nc|ENSG00000167861|Q8IV36-2|HID1;nc|ENSG00000167861|Q8IV36-3|HID1	46.45678178249821	0.2311111838007999	1				NaN	NaN	0	NaN	6494	4760	11252
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11265	34.46	NaN	4137.2	30	0	471.4	0.213				-1	 	0	64	602.7950994184927	1203.5756459037852	2	602.7967529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	6500	4763	11264
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11266	34.464	NaN	1651.4	30	0	284.97	0.036			+	-1	GAVCVANLNM	10	54	532.7454581412449	1063.4763633492896	2	532.745849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_GAVC(Carbamidomethyl (C))VANLNM(Oxidation (M))_	REV__ENST00000374512.7_2_6:33381598-33383628:+|nuORF	51.33545320467046	0.4446945571623749	1				NaN	NaN	0	NaN	6501	4763	11264
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11272	34.478	NaN	1596.8	30	0	501.56	0.214			+	32794	RATAQGGAG	9	35	394.70405862685027	787.3935643205006	2	394.7041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RATAQGGAG_	REV__ENST00000370915.5_1_20:60697546-60697723:+|nuORF	37.15910966729921	0.4535818937225704	1				NaN	NaN	0	NaN	6504	4766	11271
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11273	34.482	NaN	732.58	30	0	77.387	0.035	+			13819	GQPQPSVPLQ	10	56	525.7831420898438	NaN	0	525.7831420898438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GQPQPSVPLQ_	ENSG00000167987|ENST00000301765|VPS37C	35.15202426646627	0.38475398474706135	1				NaN	NaN	0	NaN	6505	4766	11271
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11282	34.504	NaN	5683.7	30	0	829.88	0.214				-1	QEKAMIEK	8	71	496.75745265929606	991.5003523853921	2	498.2550964355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_QEKAM(Oxidation (M))IEK_	ENSG00000184368|ENST00000379643|MAP7D2;nc|ENSG00000184368|Q96T17-4|MAP7D2;nc|ENSG00000184368|Q96T17-5|MAP7D2;nc|ENSG00000184368|Q96T17|MAP7D2	37.81151784470057	0.6698925118251505	1				NaN	NaN	0	NaN	6511	4769	11281
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11283	34.507	NaN	2024.2	30	0	150.34	0.106			+	45724	VAAVSLGILAG	11	63	485.8007167754284	969.5868806176568	2	485.8011169433594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VAAVSLGILAG_	REV__ENSG00000182183|ENST00000517870|SHISAL2A;REV__ENST00000424164.1_1_1:53099333-53133078:+|nuORF;REV__ENST00000440303.5_1_1:53099138-53125209:+|nuORF;REV__nc|ENSG00000182183|Q6UWV7-2|SHISAL2A	60.97194046774394	0.3147792151722205	1				NaN	NaN	0	NaN	6512	4769	11281
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11284	34.509	NaN	1922.6	30	0	203.35	0.034			+	32778	RASATSLLF	9	57	483.27490024866006	NaN	0	483.2745361328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RASATSLLF_	REV__ENST00000393313.5_1_7:127032378-127032531:-|nuORF	37.15910966729921	0.2899585034171616	1				NaN	NaN	0	NaN	6513	4769	11281
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11292	34.529	NaN	14369	30	0	4197.8	0.215	+			4235	ATGDMSGLLK	10	70	496.75745265929606	991.5003523853921	2	496.75762939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATGDMSGLLK_	ENSG00000127837|ENST00000248450|AAMP;ENST00000475678.5_1_2:219131145-219134809:-|nuORF;ENST00000489767.5_1_2:219130391-219134818:-|nuORF	120.30596017624542	0.026897611020491978	1				NaN	NaN	0	NaN	6518	4772	11291
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11293	34.532	NaN	3201.2	30	0	717.85	0.106	+			46487	VETQKTFTL	9	65	533.7924618131784	1065.5703706931567	2	533.7930908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VETQKTFTL_	ENSG00000128833|ENST00000261839|MYO5C;ENST00000558902.5_1_15:52548900-52571163:-|nuORF;ENST00000560809.5_1_15:52557394-52562028:-|nuORF;MYO5C|p.E1050Sfs*8|1|0.32|ENSG00000128833|chr15:52229192-52229192|C/-|frameshift_variant;MYO5C|p.I480Nfs*10|1|0.5|ENSG00000128833|chr15:52253414-52253415|-/T|frameshift_variant;MYO5C|p.L1151Wfs*19|1|0.17|ENSG00000128833|chr15:52223719-52223719|A/-|frameshift_variant;MYO5C|p.L933Hfs*33|1|0.04|ENSG00000128833|chr15:52237552-52237553|-/T|frameshift_variant;MYO5C|p.L933Sfs*35|1|0.04|ENSG00000128833|chr15:52237553-52237554|-/AAGTGGA|frameshift_variant;nc|ENSG00000128833|Q9NQX4-2|MYO5C	53.08895987439943	0.27122541748218487	1				NaN	NaN	0	NaN	6519	4772	11291
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11294	34.534	NaN	1040.1	30	0	261.39	0.106			+	8277	EAIASVAVL	9	42	436.7576884850041	871.5008240368082	2	436.7573547363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EAIASVAVL_	REV__ENSG00000144730|ENST00000296318|IL17RD;REV__ENST00000469841.5_1_3:57131519-57204269:-|nuORF;REV__nc|ENSG00000144730|Q8NFM7-2|IL17RD;REV__nc|ENSG00000144730|Q8NFM7-3|IL17RD;REV__nc|ENSG00000144730|Q8NFM7-4|IL17RD	55.50420428727701	0.2510918378945873	1				NaN	NaN	0	NaN	6520	4772	11291
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11295	34.536	NaN	1294.6	30	0	116.49	0.106			+	17736	IEPNKIIV	8	46	463.28908263004735	924.5636123268947	2	463.2891540527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IEPNKIIV_	REV__ENSG00000197969|ENST00000360280|VPS13A;REV__nc|ENSG00000197969|Q96RL7-2|VPS13A;REV__nc|ENSG00000197969|Q96RL7-3|VPS13A;REV__nc|ENSG00000197969|Q96RL7-4|VPS13A;REV__VPS13A|p.E1553D|1|0.32|ENSG00000197969|chr9:77316202-77316202|A/T|missense_variant;REV__VPS13A|p.I1709Nfs*6|1|0.34|ENSG00000197969|chr9:77318397-77318398|-/A|frameshift_variant;REV__VPS13A|p.M1697Cfs*13|1|0.07|ENSG00000197969|chr9:77318363-77318363|A/-|frameshift_variant;REV__VPS13A|p.N2071Tfs*18|2|0.32|ENSG00000197969|chr9:77337367-77337367|A/-|frameshift_variant;REV__VPS13A|p.Y2315Ifs*2|1|0.09|ENSG00000197969|chr9:77340463-77340463|T/-|frameshift_variant	42.396135135203025	0.6414440140393314	1				NaN	NaN	0	NaN	6521	4772	11291
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11296	34.538	NaN	1345.5	30	0	198.94	0.106			+	2278	ALYLRVVE	8	44	481.78507793928725	961.5556029453745	2	481.78729248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ALYLRVVE_	REV__ENSG00000155034|ENST00000382368|FBXL18;REV__nc|ENSG00000155034|Q96ME1-1|FBXL18;REV__nc|ENSG00000155034|Q96ME1-2|FBXL18;REV__nc|ENSG00000155034|Q96ME1-3|FBXL18;REV__nc|ENSG00000155034|Q96ME1-5|FBXL18	60.29395666154354	0.49887135096048313	1				NaN	NaN	0	NaN	6522	4772	11291
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11297	34.54	NaN	934.64	30	0	199.62	0.039			+	26887	LWQYCPFLLH	10	51	660.3351303280895	NaN	0	660.3378295898438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LWQYCPFLLH_	REV__ENSG00000179593|ENST00000380183|ALOX15B;REV__ENST00000571240.1_1_17:7942473-7945810:+|nuORF;REV__nc|ENSG00000179593|O15296-2|ALOX15B;REV__nc|ENSG00000179593|O15296-3|ALOX15B;REV__nc|ENSG00000179593|O15296-4|ALOX15B;REV__RPH3AL-ALOX15B|1|fusion;REV__RPH3AL-ALOX15B|2|fusion	16.473147378115264	0.4201028297492154	1				NaN	NaN	0	NaN	6523	4772	11291
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11303	34.556	NaN	2187.5	30	0	258.37	0.214	+			41622	SVQQLFSTL	9	63	511.779786184305	NaN	0	511.779541015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVQQLFSTL_	ENSG00000122512|ENST00000265849|PMS2;ENST00000380416.5_1_7:6042077-6048650:-|nuORF;nc|ENSG00000122512|P54278-2|PMS2;nc|ENSG00000122512|P54278-3|PMS2;nc|ENSG00000122512|P54278-4|PMS2	40.77816245573522	0.2702456086868081	1				NaN	NaN	0	NaN	6526	4775	11302
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11304	34.56	NaN	2077.1	30	0	328.63	0.034			+	13410	GLFQATLIA	9	57	467.2733920200573	932.5322311069147	2	467.27349853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GLFQATLIA_	REV__tr|U7T2T6|U7T2T6_FUSNUMATEfamilymultidrugresistanceproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00453PE=4SV=1	42.396135135203025	0.392153681582562	1				NaN	NaN	0	NaN	6527	4775	11302
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11312	34.58	NaN	1776.1	30	0	168.16	0.144			+	50719	YEGPELIYP	9	62	540.7648034689037	1079.5150540046072	2	540.7647705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YEGPELIYP_	REV__ENSG00000176092|ENST00000308182|CRYBG2	44.116797842482775	0.37197099687881774	1				NaN	NaN	0	NaN	6532	4778	11311
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11320	34.6	NaN	3080.8	30	0	1172.7	0.214	+			30487	QAFAQVFNK	9	65	526.7797411028434	1051.5449292724868	2	526.781005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QAFAQVFNK_	BZW1|p.N285Tfs*11|2|0.26|ENSG00000082153|chr2:200818782-200818782|A/-|frameshift_variant;BZW1|p.N286*|1|0.04|ENSG00000082153|chr2:200818790-200818791|-/T|frameshift_variant;BZW1|p.S325Rfs*19|1|0.04|ENSG00000082153|chr2:200819989-200819990|-/ACAATATAGAA|frameshift_variant;ENSG00000082153|ENST00000409600|BZW1;nc|ENSG00000082153|Q7L1Q6-2|BZW1;nc|ENSG00000082153|Q7L1Q6-3|BZW1;nc|ENSG00000082153|Q7L1Q6-4|BZW1	76.7741389293348	0.11149722112137898	1				NaN	NaN	0	NaN	6537	4781	11319
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11321	34.603	NaN	1724.8	30	0	122.14	0.106	+			9837	EPNFVAVGLY	10	64	554.7873583635755	1107.560163793951	2	554.7875366210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EPNFVAVGLY_	ENSG00000157796|ENST00000399820|WDR19;ENST00000512095.5_1_4:39217537-39276579:+|nuORF;nc|ENSG00000157796|Q8NEZ3-2|WDR19;WDR19|p.N1166Mfs*5|1|0.21|ENSG00000157796|chr4:39272989-39272989|A/-|frameshift_variant	35.61828744233558	0.588957954432594	1				NaN	NaN	0	NaN	6538	4781	11319
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11322	34.605	NaN	1627.4	30	0	147.84	0.035	+			46311	VEKGFTPSL	9	61	489.2685747398661	976.5225965465322	2	489.7700500488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VEKGFTPSL_	ENSG00000197142|ENST00000354655|ACSL5;ENST00000495539.5_1_10:114169305-114171667:+|nuORF;nc|ENSG00000197142|Q9ULC5-3|ACSL5;nc|ENSG00000197142|Q9ULC5-4|ACSL5	61.76455937419982	0.19890525308472518	1				NaN	NaN	0	NaN	6539	4781	11319
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11329	34.623	NaN	1534.3	30	0	123.51	0.214			+	-1	HVLSIALMKG	10	55	542.8118000800081	NaN	0	542.8118896484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_HVLSIALM(Oxidation (M))KG_	REV__ENSG00000092140|ENST00000206595|G2E3	40.77816245573522	0.36390427802201647	1				NaN	NaN	0	NaN	6543	4784	11328
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11330	34.627	NaN	2086.8	30	0	275.37	0.036	+			50848	YEVGIEELQ	9	59	540.2675362481855	NaN	0	540.2687377929688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YEVGIEELQ_	ENSG00000187889|ENST00000343433|FYB2	42.396135135203025	0.2590952873412954	1				NaN	NaN	0	NaN	6544	4784	11328
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11341	34.653	NaN	1823.2	30	0	229.07	0.142	+			6245	AVSELILSK	9	57	480.2920695587658	958.5695861843316	2	480.2923889160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVSELILSK_	CADPS2|p.D1011Nfs*3|1|0.04|ENSG00000081803|chr7:122388716-122388717|-/ATGTATT|frameshift_variant;CADPS2|p.I824*|1|0.21|ENSG00000081803|chr7:122438351-122438351|G/-|frameshift_variant;CADPS2|p.N1185Tfs*15|1|0.4|ENSG00000081803|chr7:122345632-122345632|T/-|frameshift_variant;ENSG00000081803|ENST00000449022|CADPS2;nc|ENSG00000081803|Q86UW7-2|CADPS2;nc|ENSG00000081803|Q86UW7-3|CADPS2	65.46538089061403	0.16805504838372562	1				NaN	NaN	0	NaN	6552	4787	11340
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11350	34.677	NaN	9120.8	30	0	1137.2	0.214			+	11245	FILFLRRFWWR	11	72	547.3171910023206	1638.9297436071615	3	547.6519165039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FILFLRRFWWR_	REV__ENST00000281830.3_1_2:223918801-223918864:+|nuORF	9.64613948735714	0.8253219237127141	1				NaN	NaN	0	NaN	6558	4790	11349
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11351	34.681	NaN	843.33	30	0	67.191	0.034	+			36479	SEVTAALRV	9	48	473.271728515625	NaN	0	473.271728515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEVTAALRV_	EEF2|p.E241Rfs*13|1|0.26|ENSG00000167658|chr19:3982316-3982316|C/-|frameshift_variant;ENSG00000167658|ENST00000309311|EEF2	76.7741389293348	0.08243745921263976	1				NaN	NaN	0	NaN	6559	4790	11349
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11359	34.7	NaN	2531.7	30	0	229.46	0.142	+			26869	LWHFVASL	8	54	486.7683215942504	NaN	0	486.7682189941406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LWHFVASL_	ENSG00000005810|ENST00000544440|MYCBP2;MYCBP2|p.P4047Qfs*26|2|0.35|ENSG00000005810|chr13:77067782-77067782|G/-|frameshift_variant;MYCBP2|p.T4311Pfs*37|1|0.14|ENSG00000005810|chr13:77059619-77059619|G/-|frameshift_variant;MYCBP2|p.V3749*|1|0.12|ENSG00000005810|chr13:77081486-77081486|C/-|frameshift_variant;nc|ENSG00000005810|O75592-2|MYCBP2	39.021493756699265	1.7418937515398478	1				NaN	NaN	0	NaN	6564	4793	11358
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11366	34.72	NaN	1841.7	30	0	286.35	0.143	+			10750	FAENGTVQY	9	51	514.7374720853963	1027.4603912375926	2	514.73876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FAENGTVQY_	ENSG00000100417|ENST00000216259|PMM1;ENST00000472620.5_1_22:41980283-41985061:-|nuORF;ENST00000478337.1_1_22:41980122-41985809:-|nuORF;ENST00000482178.5_1_22:41980283-41980722:-|nuORF;ENST00000485648.5_1_22:41980283-41985809:-|nuORF;PMM1|p.E103Sfs*6|1|0.05|ENSG00000100417|chr22:41584348-41584348|C/-|frameshift_variant	64.20726635412375	0.17854274437659667	1				NaN	NaN	0	NaN	6568	4796	11365
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11371	34.737	NaN	2556.2	30	0	233.32	0.214			+	2139	ALKLKAESP	9	53	478.7923352810402	955.5701176288804	2	478.7926025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ALKLKAESP_	REV__ENSG00000057294|ENST00000340811|PKP2;REV__nc|ENSG00000057294|Q99959|PKP2;REV__PKP2|p.K456Nfs*3|1|0.41|ENSG00000057294|chr12:32850776-32850776|T/-|frameshift_variant	56.72105179125745	0.24094814563026265	1				NaN	NaN	0	NaN	6570	4799	11370
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11372	34.741	NaN	1270.9	30	0	131.66	0.034	+			18361	IQNNIALK	8	51	457.2765530595805	912.5385531859611	2	457.2770690917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IQNNIALK_	ENSG00000007545|ENST00000397412|CRAMP1	68.484700416344	0.4195245774506064	1				NaN	NaN	0	NaN	6571	4799	11370
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11379	34.759	NaN	1722.2	30	0	653.58	0.145				-1	GLIRRPGTCG	10	32	362.86579577606017	1085.5755579283805	3	362.86566162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GLIRRPGTC(Carbamidomethyl (C))G_	ENST00000530737.2_1_11:828674-829541:+|nuORF	22.579656572578934	0.6954366826851017	1				NaN	NaN	0	NaN	6575	4802	11378
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11386	34.78	NaN	4855.3	30	0	597.95	0.214			+	13474	GLLGATAIIK	10	60	478.8107062634825	955.606859593765	2	478.81060791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GLLGATAIIK_	REV__tr|U7ST96|U7ST96_FUSNUHeavymetaltranslocatingP-typeATPaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01272PE=3SV=1	82.7504851949679	0.1731497355276012	1				NaN	NaN	0	NaN	6579	4805	11385
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11387	34.783	NaN	3215.9	30	0	295.31	0.106	+			42378	TAIRALETY	9	64	519.2853785390613	1036.5562041449225	2	519.28564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAIRALETY_	ELL2|p.H478Afs*4|1|0.2|ENSG00000118985|chr5:95898334-95898335|-/T|frameshift_variant;ELL2|p.K468Nfs*8|1|0.32|ENSG00000118985|chr5:95898361-95898361|T/-|frameshift_variant;ENSG00000118985|ENST00000237853|ELL2;ENST00000506628.1_1_5:95242411-95297425:-|nuORF;nc|ENSG00000118985|O00472-2|ELL2	53.08895987439943	0.27122541748218487	1				NaN	NaN	0	NaN	6580	4805	11385
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11388	34.785	NaN	1228.4	30	0	105.28	0.035			+	22544	KTRRPRPH	8	59	524.318297787953	1046.622042642706	2	524.3195190429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KTRRPRPH_	REV__nc|ENSG00000197503|Q96M19|LINC00477	26.69291269510374	0.7532304684939817	1				NaN	NaN	0	NaN	6581	4805	11385
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11397	34.807	NaN	2209.7	30	0	316.23	0.214	+			16466	HETGIAISV	9	45	463.7506812132254	925.4868094932508	2	463.7509460449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HETGIAISV_	ENSG00000095380|ENST00000210444|NANS	42.396135135203025	0.392153681582562	1				NaN	NaN	0	NaN	6587	4808	11396
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11398	34.811	NaN	2086.3	30	0	415.13	0.034	+			37353	SLFEGSLSK	9	55	484.2586588328137	966.5027647324274	2	484.2580871582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLFEGSLSK_	ENSG00000092140|ENST00000206595|G2E3;ENST00000468439.2_1_3:132106687-132107131:+|nuORF	51.19269402634007	0.2889735674168909	1				NaN	NaN	0	NaN	6588	4808	11396
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11405	34.829	NaN	5014.4	30	0	3420.5	0.14				-1	 	0	47	379.2094944986681	756.4044360641362	2	379.20977783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	6592	4811	11404
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11411	34.848	NaN	3927.8	30	0	889.07	0.214			+	13661	GNKLVNLAV	9	59	464.2846094191786	926.5546659051572	2	464.284912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GNKLVNLAV_	REV__DICER1|p.K1486Nfs*4|1|0.23|ENSG00000100697|chr14:95096462-95096462|T/-|frameshift_variant;REV__DICER1|p.S1473Ffs*4|1|0.2|ENSG00000100697|chr14:95096502-95096503|-/A|frameshift_variant;REV__ENSG00000100697|ENST00000343455|DICER1;REV__ENST00000529206.1_1_14:95595738-95599795:-|nuORF;REV__nc|ENSG00000100697|Q9UPY3-2|DICER1	55.50420428727701	0.2510918378945873	1				NaN	NaN	0	NaN	6595	4814	11410
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11412	34.852	NaN	1471.9	30	0	149.41	0.035	+			35303	SAMESFIEK	9	60	521.2496862733318	1040.4848196134635	2	521.2511596679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAMESFIEK_	ENSG00000120451|ENST00000265909|SNX19;ENST00000527451.1_1_11:130773148-130776010:-|nuORF	56.43379154798735	0.2433427591689151	1				NaN	NaN	0	NaN	6596	4814	11410
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11419	34.87	NaN	1210.5	30	0	221.03	0.214	+			4236	ATGDMSGLLK	10	43	496.75745265929606	991.5003523853921	2	496.7577819824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATGDMSGLLK_	ENSG00000127837|ENST00000248450|AAMP;ENST00000475678.5_1_2:219131145-219134809:-|nuORF;ENST00000489767.5_1_2:219130391-219134818:-|nuORF	63.53385203322761	0.33370026130094593	1				NaN	NaN	0	NaN	6600	4817	11418
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11420	34.874	NaN	1347.5	30	0	97.036	0.036	+			27833	MSSTPVPLGTC	11	53	546.7556316543548	NaN	0	546.7566528320312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MSSTPVPLGTC_	ENST00000512871.1_1_5:126859171-126859306:+|nuORF	36.446750945000026	0.40298828388271424	1				NaN	NaN	0	NaN	6601	4817	11418
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11427	34.892	NaN	1787.6	30	0	169.33	0.214	+			42358	TAIEKVVQM	9	61	509.7840106068678	NaN	0	509.78436279296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAIEKVVQM_	ENSG00000142627|ENST00000358432|EPHA2	60.11826168202944	0.14881452885248947	1				NaN	NaN	0	NaN	6605	4820	11426
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11428	34.896	NaN	1185.4	30	0	100.25	0.036				-1	PKMLPMLIT	9	50	530.3020839412254	NaN	0	530.3020629882812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_PKM(Oxidation (M))LPMLIT_	ENSG00000119915|ENST00000370005|ELOVL3	34.172542307311794	0.30503706118289736	1				NaN	NaN	0	NaN	6606	4820	11426
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11436	34.916	NaN	2966.4	30	0	450.05	0.142	+			24460	LGFSALLNV	9	55	467.2733920200573	932.5322311069147	2	467.2736511230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LGFSALLNV_	ENST00000264193.2_1_3:98298778-98298835:-|nuORF	47.91560031466742	0.327412564698279	1				NaN	NaN	0	NaN	6611	4823	11435
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11450	34.959	NaN	2031.1	30	0	107.57	0.214	+			11497	FPDKPITQY	9	57	554.7873583635755	1107.560163793951	2	554.7879638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FPDKPITQY_	ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656-2|DDOST;nc|ENSG00000244038|P39656-3|DDOST;nc|ENSG00000244038|P39656|DDOST	32.81241826257853	0.4965981579233955	1				NaN	NaN	0	NaN	6619	4829	11449
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11451	34.963	NaN	987.76	30	0	72.642	0.106			+	-1	EVAEIVCVI	9	51	516.2764892578125	NaN	0	516.2764892578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_EVAEIVC(Carbamidomethyl (C))VI_	REV__PLXNB2|p.A865V|1|0.3|ENSG00000196576|chr22:50283422-50283422|G/A|missense_variant	37.15910966729921	0.2899585034171616	1				NaN	NaN	0	NaN	6620	4829	11449
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11452	34.965	NaN	953.38	30	0	155.78	0.034	+			25305	LPAPPTQNM	9	46	484.7468649404802	NaN	0	484.74786376953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LPAPPTQNM_	ENSG00000141380|ENST00000415083|SS18;ENSG00000184402|ENST00000331758|SS18L1;nc|ENSG00000141380|Q15532-2|SS18;nc|ENSG00000184402|O75177-2|SS18L1;nc|ENSG00000184402|O75177-5|SS18L1;SS18|p.G113Vfs*11|1|0.35|ENSG00000141380|chr18:26057636-26057636|C/-|frameshift_variant	29.14955571784316	0.3303970763161698	1				NaN	NaN	0	NaN	6621	4829	11449
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11459	34.983	NaN	4159.4	30	0	289.62	0.143	+			9507	EKVGEQPTL	9	60	500.76919831678646	999.5238437003729	2	500.7699890136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EKVGEQPTL_	ENSG00000136688|ENST00000259205|IL36G;nc|ENSG00000136688|Q9NZH8-2|IL36G	66.42927471994793	0.16001998865088202	1				NaN	NaN	0	NaN	6625	4832	11458
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11466	35.004	NaN	1700.9	30	0	260.13	0.214	+			463	AAVPKSLQL	9	54	463.78694224365495	NaN	0	463.7873229980469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAVPKSLQL_	AP1G2|p.L755Cfs*3|1|0.18|ENSG00000213983|chr14:23559844-23559844|G/-|frameshift_variant;ENSG00000213983|ENST00000397120|AP1G2;ENST00000460049.6_1_14:24028960-24033376:-|nuORF;ENST00000535852.6_1_14:24028960-24035624:-|nuORF;ENST00000557391.1_1_14:24028960-24029655:-|nuORF	60.11826168202944	0.14881452885248947	1				NaN	NaN	0	NaN	6629	4835	11465
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11467	35.008	NaN	1827.3	30	0	234.91	0.106	+			51227	YPVEIHEY	8	61	525.2504698080994	1048.4863866829987	2	525.2522583007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YPVEIHEY_	C1D|p.W68Gfs*16|1|0.11|ENSG00000197223|chr2:68046347-68046347|A/-|frameshift_variant;ENSG00000197223|ENST00000410067|C1D;ENST00000485709.1_1_2:68273401-68290109:-|nuORF	55.50420428727701	0.5462892107279674	1				NaN	NaN	0	NaN	6630	4835	11465
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11468	35.01	NaN	1219.8	30	0	90.742	0.106	+			47367	VPGGVDLLTL	10	54	492.29230003090254	NaN	0	492.292724609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VPGGVDLLTL_	DENND3|p.L310Sfs*31|1|0.4|ENSG00000105339|chr8:141155938-141155938|C/-|frameshift_variant;ENSG00000105339|ENST00000519811|DENND3;ENST00000518198.1_1_8:142138775-142151424:+|nuORF;nc|ENSG00000105339|A2RUS2-2|DENND3;nc|ENSG00000105339|A2RUS2-4|DENND3;nc|ENSG00000105339|A2RUS2|DENND3	42.396135135203025	0.3536752194735987	1				NaN	NaN	0	NaN	6631	4835	11465
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11469	35.012	NaN	1206.2	30	0	617.29	0.106			+	17872	IGAAVAATVM	10	39	452.25233758646584	902.4901222397317	2	452.2523193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IGAAVAATVM_	REV__CHIA|p.N312Mfs*68|1|0.24|ENSG00000134216|chr1:111319135-111319135|A/-|frameshift_variant;REV__ENSG00000134216|ENST00000369740|CHIA;REV__nc|ENSG00000134216|Q9BZP6-2|CHIA;REV__nc|ENSG00000134216|Q9BZP6-3|CHIA	18.324413293986947	0.7233354337501514	1				NaN	NaN	0	NaN	6632	4835	11465
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11470	35.013	NaN	878.9	30	0	117.01	0.106	+			33675	RNNFLIQMFH	10	39	660.3359985351562	NaN	0	660.3359985351562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RNNFLIQMFH_	ENSG00000108381|ENST00000263080|ASPA	20.94693142431847	0.4201028297492154	1				NaN	NaN	0	NaN	6633	4835	11465
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11471	35.015	NaN	494.82	30	0	30.774	0.034				-1	WKCLNPSQRAL	11	35	458.242919921875	NaN	0	458.242919921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_WKC(Carbamidomethyl (C))LNPSQRAL_	ENSG00000189190|ENST00000692063|ZNF600;ENSG00000213020|ENST00000652185|ZNF611;ZNF611|p.F463Lfs*36|1|0.09|ENSG00000213020|chr19:52705666-52705666|A/-|frameshift_variant;ZNF611|p.K221Nfs*6|1|0.35|ENSG00000213020|chr19:52706392-52706392|T/-|frameshift_variant	22.561587123415745	0.456735970842152	1				NaN	NaN	0	NaN	6634	4835	11465
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11472	35.016	NaN	1728.3	30	0	78.14	0.154				-1	 	0	70	667.0165958645777	NaN	0	667.016845703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	6635	4835	11465
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11479	35.037	NaN	9260.1	30	0	1092.5	0.214	+			28281	NEASVLHNL	9	73	498.759081205729	995.503609478258	2	498.7593688964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NEASVLHNL_	ENSG00000078814|ENST00000262873|MYH7B;ENSG00000100345|ENST00000216181|MYH9;ENSG00000105357|ENST00000642316|MYH14;ENSG00000133026|ENST00000360416|MYH10;ENSG00000133392|ENST00000300036|MYH11;MYH10|p.A411Pfs*11|1|0.15|ENSG00000133026|chr17:8546562-8546562|T/-|frameshift_variant;MYH14|p.G549Wfs*8|1|0.23|ENSG00000105357|chr19:50250519-50250520|-/C|frameshift_variant;MYH14|p.L1950Sfs*14|1|0.34|ENSG00000105357|chr19:50309646-50309646|C/-|frameshift_variant;MYH14|p.M997*|1|0.19|ENSG00000105357|chr19:50271483-50271483|A/-|frameshift_variant;MYH14|p.P548Lfs*25|2|0.32|ENSG00000105357|chr19:50250520-50250520|C/-|frameshift_variant;MYH14|p.R929Gfs*44|1|0.38|ENSG00000105357|chr19:50268237-50268237|G/-|frameshift_variant;MYH9|p.C91Y|1|0.25|ENSG00000100345|chr22:36348965-36348965|C/T|missense_variant;MYH9|p.I784*|1|0.07|ENSG00000100345|chr22:36304036-36304036|G/-|frameshift_variant;nc|ENSG00000078814|A7E2Y1-2|MYH7B;nc|ENSG00000078814|A7E2Y1|MYH7B;nc|ENSG00000105357|Q7Z406-4|MYH14;nc|ENSG00000105357|Q7Z406-5|MYH14;nc|ENSG00000105357|Q7Z406-6|MYH14;nc|ENSG00000105357|Q7Z406|MYH14;nc|ENSG00000133026|P35580-2|MYH10;nc|ENSG00000133026|P35580-3|MYH10;nc|ENSG00000133026|P35580-5|MYH10;nc|ENSG00000133026|P35580|MYH10;nc|ENSG00000133392|P35749-2|MYH11;nc|ENSG00000133392|P35749-3|MYH11;nc|ENSG00000133392|P35749-4|MYH11	112.41091882917199	0.026537921851008135	1				NaN	NaN	0	NaN	6639	4838	11478
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11480	35.04	NaN	2584.7	30	0	251.67	0.106	+			44942	TVATAVEQY	9	59	491.24831243686253	980.4820719405251	2	491.2479553222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVATAVEQY_	ENSG00000116209|ENST00000234831|TMEM59	90.36981228632155	0.0638227155548745	1				NaN	NaN	0	NaN	6640	4838	11478
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11481	35.042	NaN	1241.5	30	0	204.49	0.106	+			831	AEGFVRAL	8	43	431.74215762162595	NaN	0	431.74267578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEGFVRAL_	ENSG00000177606|ENST00000371222|JUN;JUN|p.R257Kfs*53|1|0.31|ENSG00000177606|chr1:58782301-58782302|-/T|frameshift_variant	99.37495909608758	1.7418937515398478	1				NaN	NaN	0	NaN	6641	4838	11478
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11482	35.044	NaN	2852.9	30	0	338.61	0.035	+			20594	KGAESVTER	9	61	488.7575647821972	975.5005766311945	2	488.75811767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KGAESVTER_	ENSG00000038427|ENST00000265077|VCAN;ENST00000513016.5_1_5:82832752-82876250:+|nuORF;nc|ENSG00000038427|P13611-2|VCAN;nc|ENSG00000038427|P13611-5|VCAN;VCAN|p.E2431Rfs*10|1|0.16|ENSG00000038427|chr5:83540290-83540291|-/G|frameshift_variant	44.377184641726394	0.36891676396732553	1				NaN	NaN	0	NaN	6642	4838	11478
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11489	35.062	NaN	7731.4	30	0	557.02	0.215	+			4666	ATLQYIVGR	9	79	510.795444821626	1019.576336710052	2	510.7961120605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATLQYIVGR_	ENSG00000085377|ENST00000652536|PREP;PREP|p.L670Cfs*20|1|0.16|ENSG00000085377|chr6:105278269-105278269|G/-|frameshift_variant	134.7655990226056	0.012935733000282069	1				NaN	NaN	0	NaN	6646	4841	11488
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11490	35.066	NaN	1571.6	30	0	201.54	0.106			+	48025	VSRKEVEL	8	51	480.2792565353077	958.5439601374154	2	480.27899169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSRKEVEL_	REV__ENSG00000141027|ENST00000268712|NCOR1;REV__ENST00000470782.5_1_17:15935612-15971511:-|nuORF	45.97224482568171	0.6192535143389125	1				NaN	NaN	0	NaN	6647	4841	11488
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11491	35.068	NaN	2337.8	30	0	172.85	0.035	+			2514	APVGGHILSY	10	62	507.27379536851174	1012.5330378038235	2	507.2743225097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_APVGGHILSY_	ENSG00000197879|ENST00000648651|MYO1C;nc|ENSG00000197879|O00159-2|MYO1C;nc|ENSG00000197879|O00159-3|MYO1C	71.29570347882199	0.26673431503403816	1				NaN	NaN	0	NaN	6648	4841	11488
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11498	35.086	NaN	2932.6	30	0	293.91	0.214	+			40608	SVAITNKNI	9	61	480.2792565353077	958.5439601374154	2	480.27911376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVAITNKNI_	tr|U7T8R5|U7T8R5_FUSNUPeptidaseM20domain-containingprotein2OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00140PE=3SV=1	74.25504064058377	0.12238981753128622	1				NaN	NaN	0	NaN	6652	4844	11497
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11499	35.089	NaN	1297.6	30	0	282.21	0.106			+	2297	AMARAPGQ	8	38	401.20405103228114	800.3935491313623	2	401.204345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AMARAPGQ_	REV__ENST00000600353.1_1_19:58446215-58446374:-|nuORF	28.2542754592877	0.7411748056684583	1				NaN	NaN	0	NaN	6653	4844	11497
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11500	35.091	NaN	2148.8	30	0	201.56	0.106	+			3061	ASFNDTFVH	9	51	519.2377983658976	1036.461043798595	2	519.2383422851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASFNDTFVH_	ENSG00000164587|ENST00000407193|RPS14;ENST00000519690.1_1_5:149827146-149827347:-|nuORF	32.81241826257853	0.4965981579233955	1				NaN	NaN	0	NaN	6654	4844	11497
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11501	35.093	NaN	711.27	30	0	114.07	0.106			+	43452	TGLTGLTVL	9	38	437.7653503417969	NaN	0	437.7653503417969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TGLTGLTVL_	REV__ENSG00000131269|ENST00000373394|ABCB7;REV__nc|ENSG00000131269|O75027-2|ABCB7;REV__nc|ENSG00000131269|O75027-3|ABCB7	37.15910966729921	0.2899585034171616	1				NaN	NaN	0	NaN	6655	4844	11497
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11502	35.095	NaN	1065.1	30	0	180.87	0.034			+	2726	AQVVAIFTS	9	58	468.26287688974026	934.5112008462805	2	468.2630310058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AQVVAIFTS_	REV__ENSG00000100031|ENST00000400382|GGT1;REV__ENSG00000100121|ENST00000448514|GGTLC2;REV__ENSG00000149435|ENST00000335694|GGTLC1;REV__ENSG00000274252|ENST00000619998|GGTLC3;REV__GGT1|p.A537T|1|0.11|ENSG00000100031|chr22:24628738-24628738|G/A|missense_variant;REV__nc|ENSG00000100031|P19440-3|GGT1;REV__nc|ENSG00000133475|P36268-2|GGT2P;REV__nc|ENSG00000133475|P36268-3|GGT2P;REV__nc|ENSG00000133475|P36268|GGT2P;REV__nc|ENSG00000197421|A6NGU5|GGT3P	34.172542307311794	0.4838870758800184	1				NaN	NaN	0	NaN	6656	4844	11497
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11508	35.111	NaN	2125.1	30	0	455.3	0.214	+			36651	SGLQVQDIIK	10	60	550.8194366207973	1099.6243203083945	2	550.8203735351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SGLQVQDIIK_	FGD3|p.V430I|1|0.34|ENSG00000127084|chr9:93018148-93018148|G/A|missense_variant	36.31764250033197	0.5830761606467809	1				NaN	NaN	0	NaN	6659	4847	11507
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11509	35.115	NaN	1508.6	30	0	214.61	0.034				-1	MIPKMKLP	8	51	487.28193712567327	972.5493213181466	2	487.28192138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_M(Oxidation (M))IPKMKLP_	ENST00000416734.1_1_7:121080890-121081274:-|nuORF	50.0245360154114	0.5941082100236891	1				NaN	NaN	0	NaN	6660	4847	11507
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11513	35.129	NaN	904.93	30	0	120.81	0.215	+			42254	TAARAWAL	8	47	430.2427762436151	858.4709995540302	2	430.24261474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAARAWAL_	ENSG00000244038|ENST00000602624|DDOST;ENST00000477229.1_1_1:20987242-20987843:-|nuORF;nc|ENSG00000244038|P39656-2|DDOST;nc|ENSG00000244038|P39656-3|DDOST;nc|ENSG00000244038|P39656|DDOST	37.15910966729921	0.6739408393984688	1				NaN	NaN	0	NaN	6661	4850	11512
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11514	35.133	NaN	1096.1	30	0	128.04	0.036	+			41093	SVINPGAIYR	10	52	545.3062113861561	1088.597869839112	2	545.3071899414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVINPGAIYR_	ENSG00000115232|ENST00000397033|ITGA4;ENST00000465522.5_1_2:182322141-182350724:+|nuORF;ENST00000476089.1_1_2:182321937-182323202:+|nuORF;ENST00000484404.1_1_2:182322441-182339919:+|nuORF;ITGA4|p.T615Nfs*11|1|0.22|ENSG00000115232|chr2:181509798-181509799|-/A|frameshift_variant;nc|ENSG00000115232|P13612-2|ITGA4	52.936696900407355	0.4300801048568001	1				NaN	NaN	0	NaN	6662	4850	11512
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11526	35.171	NaN	2245.4	30	0	395.52	0.214	+			5550	AVALPVAVGR	10	52	476.80072554681215	951.5868981604243	2	476.80010986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVALPVAVGR_	ENSG00000275395|ENST00000616721|FCGBP;nc|ENSG00000275395|Q9Y6R7|FCGBP	65.80317337860623	0.313061058278602	1				NaN	NaN	0	NaN	6668	4856	11525
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11527	35.174	NaN	341.36	30	0	174.19	0.03			+	15613	GVKHRGGRI	9	13	327.20281410092156	NaN	0	327.203369140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GVKHRGGRI_	REV__ENST00000269033.7_1_17:27957016-27957265:-|nuORF	9.182911543092327	0.4059015956942957	1				NaN	NaN	0	NaN	6669	4856	11525
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11540	35.212	NaN	3179.2	30	0	311.94	0.214	+			41559	SVQETVLPIK	10	65	557.329926953013	1112.645300972826	2	557.33056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVQETVLPIK_	ENSG00000169057|ENST00000453960|MECP2;MECP2|p.E432Afs*3|1|0.03|ENSG00000169057|chrX:154030534-154030535|CC/-|frameshift_variant;MECP2|p.K449Sfs*33|1|0.2|ENSG00000169057|chrX:154030482-154030482|T/-|frameshift_variant;nc|ENSG00000169057|P51608|MECP2	89.02883481214508	0.13663399911061233	1				NaN	NaN	0	NaN	6676	4862	11539
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11541	35.215	NaN	2464.8	30	0	357.13	0.106	+			48336	VTGGIFSVTK	10	56	504.790274160872	1007.565995388544	2	504.7906188964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTGGIFSVTK_	ENSG00000151135|ENST00000280756|TMEM263	53.08895987439943	0.42869529153390606	1				NaN	NaN	0	NaN	6677	4862	11539
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11542	35.217	NaN	2101.9	30	0	164.4	0.106	+			13483	GLLLYLVPA	9	61	479.8013575574031	957.5881621816062	2	480.302978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GLLLYLVPA_	ENSG00000196313|ENST00000434423|POM121;nc|ENSG00000272391|A8CG34|POM121C	39.021493756699265	0.43173687394350213	1				NaN	NaN	0	NaN	6678	4862	11539
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11543	35.219	NaN	1694.8	30	0	489.89	0.106	+			48058	VSSKVLGCTM	10	60	512.7615402222734	NaN	0	512.7606811523438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSSKVLGCTM_	ENST00000578082.5_1_17:80426730-80430469:+|nuORF	36.446750945000026	0.3805027428805705	1				NaN	NaN	0	NaN	6679	4862	11539
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11544	35.221	NaN	1318	30	0	168.86	0.037	+			43763	TLGPSVDPEIP	11	57	562.7983300957208	NaN	0	562.7979125976562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TLGPSVDPEIP_	DNAJC14|p.G80Vfs*176|1|0.17|ENSG00000135392|chr12:55828420-55828420|C/-|frameshift_variant;ENSG00000135392|ENST00000678005|DNAJC14	47.657333605630114	0.3321446360127153	1				NaN	NaN	0	NaN	6680	4862	11539
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11549	35.235	NaN	2048.1	30	0	95.997	0.214			+	51166	YPDPYNVLK	9	67	554.7873583635755	1107.560163793951	2	554.7888793945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YPDPYNVLK_	REV__tr|U7SU52|U7SU52_FUSNUThreonine-phosphatedecarboxylaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01024PE=4SV=1	44.116797842482775	0.37197099687881774	1				NaN	NaN	0	NaN	6682	4865	11548
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11550	35.239	NaN	984.21	30	0	109.13	0.036	+			28528	NIHPTAMMF	9	49	531.2495698674287	NaN	0	531.2490234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NIHPTAMMF_	ENSG00000128731|ENST00000261609|HERC2;ENST00000424611.5_1_15:20644728-20658919:-|nuORF;ENST00000428453.5_1_15:20588586-20667676:-|nuORF;ENST00000430598.5_1_15:20613931-20667676:-|nuORF;ENST00000437318.5_1_15:20645779-20651177:-|nuORF;ENST00000529624.5_3_15:28877823-28916776:+|nuORF;HERC2|p.G2202Afs*8|1|0.2|ENSG00000128731|chr15:28213923-28213923|C/-|frameshift_variant;nc|ENSG00000290376|Q9BVR0|HERC2P3	35.61828744233558	0.29773779453147337	1				NaN	NaN	0	NaN	6683	4865	11548
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11556	35.255	NaN	1271	30	0	867.16	0.214			+	-1	FKKKMKLM	8	25	357.2147410725296	NaN	0	357.2147521972656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_FKKKM(Oxidation (M))KLM_	REV__ENST00000264065.11_1_2:183641855-183641906:+|nuORF	12.959181472943097	1.7418937515398478	1				NaN	NaN	0	NaN	6686	4868	11555
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11557	35.259	NaN	3449.2	30	0	930.3	0.035	+			38159	SQAPVRILP	9	64	490.7981836130048	979.5818142928097	2	490.7977294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SQAPVRILP_	ENST00000440097.5_1_3:45636669-45636975:+|nuORF	42.396135135203025	0.392153681582562	1				NaN	NaN	0	NaN	6687	4868	11555
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11568	35.295	NaN	1596.3	30	0	409.74	0.215	+			39899	STLTDSLVCK	10	51	533.7768553260834	1065.5391577189666	2	533.7772827148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STLTDSLVCK_	EEF2|p.E241Rfs*13|1|0.26|ENSG00000167658|chr19:3982316-3982316|C/-|frameshift_variant;ENSG00000167658|ENST00000309311|EEF2;ENST00000594885.1_1_19:3984132-3985378:-|nuORF	28.081489160057373	0.6505064946289502	1				NaN	NaN	0	NaN	6692	4874	11567
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11569	35.299	NaN	935.22	30	0	183.26	0.034	+			5823	AVIGGVAVGVV	11	44	470.79534820600196	NaN	0	470.794677734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVIGGVAVGVV_	ENSG00000142627|ENST00000358432|EPHA2	31.954861631926434	0.423006731851301	1				NaN	NaN	0	NaN	6693	4874	11567
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11577	35.319	NaN	3543	30	0	424.27	0.214	+			8236	EAFKAIGTAY	10	65	535.7797160967066	1069.544879260213	2	535.78173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EAFKAIGTAY_	ENSG00000148719|ENST00000444643|DNAJB12;nc|ENSG00000148719|Q9NXW2-2|DNAJB12	118.74307786436346	0.029104951601466193	1				NaN	NaN	0	NaN	6698	4877	11576
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11578	35.322	NaN	1805.6	30	0	95.296	0.106	+			11498	FPDKPITQY	9	66	554.7873583635755	1107.560163793951	2	554.7884521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FPDKPITQY_	ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656-2|DDOST;nc|ENSG00000244038|P39656-3|DDOST;nc|ENSG00000244038|P39656|DDOST	36.446750945000026	0.4619375763483977	1				NaN	NaN	0	NaN	6699	4877	11576
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11579	35.324	NaN	1412.5	30	0	167.52	0.034	+			549	ADFETVRM	8	45	484.72901094338107	967.4434689535622	2	484.7295227050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ADFETVRM_	ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2	71.87747018426188	0.391254423828572	1				NaN	NaN	0	NaN	6700	4877	11576
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11586	35.342	NaN	4152.3	30	0	2735.7	0.214				-1	 	0	39	379.2094879044652	756.4044228757305	2	379.21002197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	6704	4880	11585
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11587	35.346	NaN	5371.4	30	0	720.8	0.035	+			4023	ATDAVGIVLK	10	57	493.79817526924427	985.5817976052886	2	493.7981262207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATDAVGIVLK_	ENSG00000132676|ENST00000368336|DAP3;ENST00000462978.1_1_1:155697409-155701908:+|nuORF;nc|ENSG00000132676|P51398-2|DAP3;nc|ENSG00000132676|P51398-3|DAP3	150.36159442982594	0.008431331982545942	1				NaN	NaN	0	NaN	6705	4880	11585
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11593	35.362	NaN	1123.3	30	0	142.26	0.144	+			18714	ITFFSSSSAK	10	56	537.7786585370117	NaN	0	537.7786865234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ITFFSSSSAK_	ENST00000439559.2_1_10:89102840-89103146:+|nuORF;ENST00000605920.1_1_10:81586793-81587114:+|nuORF;ENST00000609350.1_1_2:128644229-128644535:+|nuORF	53.08895987439943	0.2860736266326207	1				NaN	NaN	0	NaN	6708	4883	11592
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11599	35.38	NaN	1360.4	30	0	193.33	0.142	+			40479	STWVIRGR	8	54	487.77939327707804	NaN	0	487.7799072265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STWVIRGR_	ENST00000534047.5_1_11:10503676-10517278:+|nuORF	44.116797842482775	1.7418937515398478	1				NaN	NaN	0	NaN	6711	4886	11598
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11607	35.413	NaN	4716.5	30	0	807	0.144	+			3838	ATALEYVYK	9	67	529.2817233355349	1056.5488937378698	2	529.2821655273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATALEYVYK_	ENSG00000135441|ENST00000548925|BLOC1S1;ENST00000549147.1_1_12:56113198-56113390:+|nuORF;nc|ENSG00000135441|P78537-2|BLOC1S1	115.49404669440601	0.023927554121326553	1				NaN	NaN	0	NaN	6713	4892	11606
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11611	35.43	NaN	1591.9	30	0	90.796	0.212	+			7357	DDDDDDDDDDY	11	58	666.6826337135527	NaN	0	666.68359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DDDDDDDDDDY_	ENSG00000273841|ENST00000217893|TAF9	6.31265097734313	0.456735970842152	1				NaN	NaN	0	NaN	6714	4895	11610
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11612	35.434	NaN	1382.6	30	0	192.1	0.106	+			40691	SVATVVYLR	9	57	504.29748371294124	NaN	0	504.29779052734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVATVVYLR_	ENSG00000132383|ENST00000254719|RPA1	82.24051045832904	0.06370642293906256	1				NaN	NaN	0	NaN	6715	4895	11610
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11613	35.436	NaN	1728.5	30	0	189.57	0.106	+			50644	YEDLKAEL	8	58	490.7502753437476	979.4859977542952	2	490.75048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YEDLKAEL_	ENSG00000127831|ENST00000248444|VIL1	62.107414245175825	0.4809183816468817	1				NaN	NaN	0	NaN	6716	4895	11610
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11614	35.437	NaN	1143	30	0	202.16	0.035	+			14177	GSQFFITTK	9	41	514.7741143526804	1027.5336757721607	2	514.7748413085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GSQFFITTK_	ENSG00000114857|ENST00000232978|NKTR;ENSG00000138398|ENST00000260970|PPIG;nc|ENSG00000138398|Q13427-2|PPIG;NKTR|p.K429Nfs*37|1|0.2|ENSG00000114857|chr3:42636986-42636986|A/-|frameshift_variant;NKTR|p.N670Ifs*43|1|0.14|ENSG00000114857|chr3:42637707-42637707|A/-|frameshift_variant;NKTR|p.R859Kfs*9|1|0.28|ENSG00000114857|chr3:42638271-42638272|-/A|frameshift_variant;NKTR|p.S692Ffs*17|1|0.1|ENSG00000114857|chr3:42637779-42637791|CAAGGAGCAGATC/-|frameshift_variant;PPIG|p.N420Mfs*33|1|0.4|ENSG00000138398|chr2:169636512-169636512|A/-|frameshift_variant	41.42661286455405	0.403525789677298	1				NaN	NaN	0	NaN	6717	4895	11610
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11636	35.509	NaN	1902	30	0	370.94	0.214	+			15498	GVAPFTIAR	9	55	466.2714520136832	930.5283510941664	2	466.2710876464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVAPFTIAR_	COL6A3|p.A2956Lfs*45|1|0.33|ENSG00000163359|chr2:237336234-237336234|C/-|frameshift_variant;COL6A3|p.A2957Lfs*44|1|0.33|ENSG00000163359|chr2:237336232-237336232|A/-|frameshift_variant;COL6A3|p.G1770Vfs*12|1|0.05|ENSG00000163359|chr2:237366878-237366879|-/TGGTGTAA|frameshift_variant;COL6A3|p.G2207Efs*35|1|0.22|ENSG00000163359|chr2:237354908-237354908|G/-|frameshift_variant;COL6A3|p.G3016Vfs*19|1|0.34|ENSG00000163359|chr2:237334810-237334810|G/-|frameshift_variant;COL6A3|p.P2319Qfs*12|1|0.06|ENSG00000163359|chr2:237348359-237348359|G/-|frameshift_variant;COL6A3|p.V1771Sfs*8|3|0.08|ENSG00000163359|chr2:237366876-237366876|C/-|frameshift_variant;ENSG00000163359|ENST00000295550|COL6A3;nc|ENSG00000163359|P12111-2|COL6A3;nc|ENSG00000163359|P12111-3|COL6A3;nc|ENSG00000163359|P12111-4|COL6A3;nc|ENSG00000163359|P12111-5|COL6A3	37.81151784470057	0.4459294069877048	1				NaN	NaN	0	NaN	6727	4907	11635
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11637	35.512	NaN	1100	30	0	103.94	0.035	+			10576	EYIPGTTSL	9	55	490.7493591308594	NaN	0	490.7493591308594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EYIPGTTSL_	ENSG00000111371|ENST00000398637|SLC38A1;SLC38A1|p.F232Sfs*2|1|0.39|ENSG00000111371|chr12:46204542-46204542|A/-|frameshift_variant;SLC38A1|p.K136Sfs*14|1|0.29|ENSG00000111371|chr12:46207603-46207603|T/-|frameshift_variant	35.61828744233558	0.29773779453147337	1				NaN	NaN	0	NaN	6728	4907	11635
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11643	35.528	NaN	2367.3	30	0	290.06	0.214	+			45278	TVQVYIITK	9	54	532.8211371379142	1063.6277213426283	2	532.8213500976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVQVYIITK_	ENSG00000114388|ENST00000232501|NPRL2;ENST00000479512.5_1_3:50387244-50387426:-|nuORF;ENST00000487632.5_1_3:50386870-50387426:-|nuORF	86.88156770896713	0.07365720931774442	1				NaN	NaN	0	NaN	6731	4910	11642
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11644	35.532	NaN	2068.3	30	0	205.78	0.106	+			42983	TEKIISAEL	9	55	502.2868076958102	1002.5590624584204	2	502.2869873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEKIISAEL_	ENSG00000073614|ENST00000399788|KDM5A;nc|ENSG00000073614|P29375-2|KDM5A	56.43379154798735	0.2433427591689151	1				NaN	NaN	0	NaN	6732	4910	11642
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11645	35.534	NaN	2617.1	30	0	577.6	0.034			+	10861	FAVAIKNVN	9	59	488.28447491518637	974.5543968971728	2	488.2843017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FAVAIKNVN_	REV__ENSG00000174776|ENST00000682715|WDR49;REV__WDR49|p.K607Nfs*9|2|0.38|ENSG00000174776|chr3:167505314-167505314|T/-|frameshift_variant	33.51558372728122	0.4900267029546261	1				NaN	NaN	0	NaN	6733	4910	11642
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11657	35.568	NaN	1284.5	30	0	123.44	0.143	+			42303	TAFDVAEKY	9	48	522.2554871341002	1042.4964213350004	2	522.2565307617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAFDVAEKY_	ENSG00000072110|ENST00000394419|ACTN1;ENST00000554508.5_1_14:69367621-69387744:-|nuORF;nc|ENSG00000072110|P12814-2|ACTN1;nc|ENSG00000072110|P12814-4|ACTN1;nc|ENSG00000072110|P12814|ACTN1	44.377184641726394	0.36891676396732553	1				NaN	NaN	0	NaN	6739	4916	11656
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11662	35.585	NaN	1629.6	30	0	79.986	0.144	+			28083	NAFEVAEKY	9	57	535.7607060080614	1069.5068590829228	2	535.7615966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAFEVAEKY_	ENSG00000130402|ENST00000252699|ACTN4;ENST00000588618.5_1_19:39138385-39212431:+|nuORF	51.19269402634007	0.2889735674168909	1				NaN	NaN	0	NaN	6741	4919	11661
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11666	35.601	NaN	1221.3	30	0	218.66	0.214	+			2527	APVPIAAH	8	45	388.22662353515625	NaN	0	388.22662353515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_APVPIAAH_	ENSG00000143442|ENST00000271715|POGZ;ENST00000476128.1_1_1:151413368-151414680:-|nuORF;nc|ENSG00000143442|Q7Z3K3-4|POGZ;nc|ENSG00000143442|Q7Z3K3-5|POGZ;nc|ENSG00000143442|Q7Z3K3-6|POGZ;POGZ|p.E1016Rfs*3|1|0.42|ENSG00000143442|chr1:151405989-151405989|C/-|frameshift_variant	33.49298260027079	1.7418937515398478	1				NaN	NaN	0	NaN	6742	4922	11665
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11667	35.605	NaN	1026	30	0	110.06	0.106			+	8495	EASVHALLSP	10	49	512.2768639837396	1022.5391750342793	2	513.2659301757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EASVHALLSP_	REV__ENST00000370082.1_1_20:62201547-62204491:-|nuORF;REV__nc|ENSG00000130589|Q9BYK8|HELZ2	32.81241826257853	0.6118718159329168	1				NaN	NaN	0	NaN	6743	4922	11665
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11668	35.606	NaN	671.31	30	0	153.04	0.106				-1	 	0	26	352.7081992247424	NaN	0	352.7082824707031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	6744	4922	11665
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11669	35.608	NaN	1162.7	30	0	147.18	0.035				-1	TSSSVFQMS	9	47	516.2204359691324	1030.4263190050647	2	515.7230224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))TSSSVFQM(Oxidation (M))S_	ENST00000367526.8_1_6:145103117-145103159:+|nuORF	29.14955571784316	0.5308295550522326	1				NaN	NaN	0	NaN	6745	4922	11665
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11673	35.623	NaN	993.55	30	0	108.35	0.143	+			23529	LAIAAYWAL	9	50	496.28228759765625	NaN	0	496.28228759765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LAIAAYWAL_	ASB4|p.Y370Lfs*10|1|0.31|ENSG00000005981|chr7:95537581-95537582|-/T|frameshift_variant;ENSG00000005981|ENST00000325885|ASB4;nc|ENSG00000005981|Q9Y574-2|ASB4	39.021493756699265	0.2805557132942146	1				NaN	NaN	0	NaN	6746	4925	11672
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11680	35.643	NaN	1950.3	30	0	178.15	0.214	+			34944	SAAKLLTEY	9	58	498.2741134499215	994.533673966643	2	498.2737121582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAAKLLTEY_	ENSG00000189221|ENST00000338702|MAOA;MAOA|p.G405Afs*12|1|0.26|ENSG00000189221|chrX:43741995-43741995|G/-|frameshift_variant	50.033510581677724	0.3025703251535696	1				NaN	NaN	0	NaN	6750	4928	11679
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11681	35.647	NaN	1264.4	30	0	64.2	0.036			+	16693	HKDSPKIEV	9	62	526.7888793945312	NaN	0	526.7888793945312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HKDSPKIEV_	REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-10|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-13|TTN;REV__nc|ENSG00000155657|Q8WZ42-2|TTN;REV__nc|ENSG00000155657|Q8WZ42-3|TTN;REV__nc|ENSG00000155657|Q8WZ42-4|TTN;REV__nc|ENSG00000155657|Q8WZ42-5|TTN;REV__nc|ENSG00000155657|Q8WZ42-6|TTN;REV__nc|ENSG00000155657|Q8WZ42-7|TTN;REV__nc|ENSG00000155657|Q8WZ42-8|TTN;REV__nc|ENSG00000155657|Q8WZ42-9|TTN;REV__nc|ENSG00000155657|Q8WZ42|TTN;REV__TTN|p.A12650Gfs*4|1|0.4|ENSG00000155657|chr2:178633489-178633490|-/T|frameshift_variant;REV__TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;REV__TTN|p.A7105Cfs*8|1|0.32|ENSG00000155657|chr2:178722523-178722524|-/A|frameshift_variant;REV__TTN|p.D20259Rfs*40|1|0.44|ENSG00000155657|chr2:178583105-178583106|-/T|frameshift_variant;REV__TTN|p.D21555Ifs*6|1|0.33|ENSG00000155657|chr2:178576659-178576659|G/-|frameshift_variant;REV__TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;REV__TTN|p.D9026Afs*9|1|0.26|ENSG00000155657|chr2:178711205-178711208|CTGT/-|frameshift_variant;REV__TTN|p.E15132Sfs*22|1|0.27|ENSG00000155657|chr2:178612094-178612094|C/-|frameshift_variant;REV__TTN|p.E20392Dfs*6|1|0.04|ENSG00000155657|chr2:178582357-178582358|-/TTTAAAATTA|frameshift_variant;REV__TTN|p.E20392Kfs*4|1|0.02|ENSG00000155657|chr2:178582359-178582360|-/TTTT|frameshift_variant;REV__TTN|p.E9224Gfs*8|1|0.04|ENSG00000155657|chr2:178709697-178709698|-/TCTTATGATATCTTGAC|frameshift_variant;REV__TTN|p.F18705Lfs*8|1|0.37|ENSG00000155657|chr2:178590687-178590687|A/-|frameshift_variant;REV__TTN|p.G12742Vfs*2|1|0.05|ENSG00000155657|chr2:178632983-178632983|C/-|frameshift_variant;REV__TTN|p.G14712Dfs*11|1|0.37|ENSG00000155657|chr2:178614341-178614341|G/-|frameshift_variant;REV__TTN|p.G19920Afs*12|1|0.42|ENSG00000155657|chr2:178584961-178584961|G/-|frameshift_variant;REV__TTN|p.G22029Efs*22|2|0.13|ENSG00000155657|chr2:178575125-178575125|T/-|frameshift_variant;REV__TTN|p.I10495Nfs*4|1|0.37|ENSG00000155657|chr2:178685288-178685289|-/T|frameshift_variant;REV__TTN|p.I24998Nfs*2|1|0.35|ENSG00000155657|chr2:178566216-178566217|-/T|frameshift_variant;REV__TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;REV__TTN|p.I3592Lfs*36|1|0.25|ENSG00000155657|chr2:178741508-178741508|T/-|frameshift_variant;REV__TTN|p.I9225Cfs*34|1|0.06|ENSG00000155657|chr2:178709695-178709696|-/ATATCCATGAGCA|frameshift_variant;REV__TTN|p.K10923Rfs*104|2|0.23|ENSG00000155657|chr2:178679362-178679362|T/-|frameshift_variant;REV__TTN|p.K11381Nfs*25|1|0.07|ENSG00000155657|chr2:178671133-178671133|T/-|frameshift_variant;REV__TTN|p.K11556Sfs*15|1|0.39|ENSG00000155657|chr2:178652287-178652287|T/-|frameshift_variant;REV__TTN|p.K14271Qfs*5|1|0.02|ENSG00000155657|chr2:178617351-178617352|-/G|frameshift_variant;REV__TTN|p.K26626Nfs*34|1|0.34|ENSG00000155657|chr2:178561331-178561331|T/-|frameshift_variant;REV__TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;REV__TTN|p.K4988Ifs*4|1|0.06|ENSG00000155657|chr2:178733381-178733382|-/GAAAATGATG|frameshift_variant;REV__TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;REV__TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant;REV__TTN|p.L7142*|1|0.06|ENSG00000155657|chr2:178722407-178722411|TCTTA/-|frameshift_variant;REV__TTN|p.M4154Nfs*4|1|0.21|ENSG00000155657|chr2:178739821-178739822|-/T|frameshift_variant;REV__TTN|p.N13487Tfs*49|1|0.34|ENSG00000155657|chr2:178621335-178621335|T/-|frameshift_variant;REV__TTN|p.N15496Ifs*16|1|0.09|ENSG00000155657|chr2:178610116-178610116|T/-|frameshift_variant;REV__TTN|p.N6458Mfs*74|1|0.44|ENSG00000155657|chr2:178725998-178725998|T/-|frameshift_variant;REV__TTN|p.N7648Tfs*27|1|0.32|ENSG00000155657|chr2:178719598-178719598|T/-|frameshift_variant;REV__TTN|p.N8964Tfs*27|1|0.11|ENSG00000155657|chr2:178711988-178711988|T/-|frameshift_variant;REV__TTN|p.P16126Rfs*3|1|0.25|ENSG00000155657|chr2:178607301-178607302|TG/-|frameshift_variant;REV__TTN|p.P22810Hfs*10|1|0.03|ENSG00000155657|chr2:178572780-178572781|-/AAAT|frameshift_variant;REV__TTN|p.P4036Qfs*14|1|0.19|ENSG00000155657|chr2:178740175-178740175|G/-|frameshift_variant;REV__TTN|p.S2859Qfs*30|1|0.21|ENSG00000155657|chr2:178770127-178770127|G/-|frameshift_variant;REV__TTN|p.S5235Hfs*25|1|0.06|ENSG00000155657|chr2:178732315-178732316|-/ATATATG|frameshift_variant;REV__TTN|p.T4116Sfs*25|1|0.04|ENSG00000155657|chr2:178739937-178739938|-/CTATTATATATGAGGAA|frameshift_variant;REV__TTN|p.V10632Yfs*16|1|0.16|ENSG00000155657|chr2:178683254-178683254|T/-|frameshift_variant;REV__TTN|p.V11008Sfs*13|1|0.33|ENSG00000155657|chr2:178678146-178678147|-/T|frameshift_variant;REV__TTN|p.V11345Ffs*4|1|0.4|ENSG00000155657|chr2:178672044-178672044|T/-|frameshift_variant;REV__TTN|p.V13823*|1|0.28|ENSG00000155657|chr2:178620027-178620027|C/-|frameshift_variant;REV__TTN|p.V22573Cfs*4|2|0.31|ENSG00000155657|chr2:178573492-178573492|C/-|frameshift_variant;REV__TTN|p.V27442Cfs*4|1|0.05|ENSG00000155657|chr2:178558107-178558108|-/A|frameshift_variant;REV__TTN|p.W5728Mfs*3|1|0.07|ENSG00000155657|chr2:178730267-178730268|-/T|frameshift_variant	44.377184641726394	0.24544280798894275	1				NaN	NaN	0	NaN	6751	4928	11679
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11691	35.669	NaN	2945.9	30	0	518.8	0.143	+			24339	LFLCRWVS	8	56	512.2768639837396	1022.5391750342793	2	512.2772216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LFLCRWVS_	ENST00000476954.1_1_1:156220380-156221068:-|nuORF	60.29395666154354	0.49887135096048313	1				NaN	NaN	0	NaN	6758	4931	11690
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11698	35.689	NaN	3751.7	30	0	298.96	0.144	+			41545	SVQDVIYVR	9	74	539.7983886443126	1077.582224355425	2	539.79931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVQDVIYVR_	ENSG00000099282|ENST00000373290|TSPAN15	85.86182877749512	0.07653218437724067	1				NaN	NaN	0	NaN	6762	4934	11697
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11704	35.707	NaN	2796.9	30	0	583.16	0.214			+	24824	LISLISSVLG	10	60	501.3159894048174	1000.6174258764348	2	501.3163146972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LISLISSVLG_	REV__ENSG00000131779|ENST00000369306|PEX11B;REV__nc|ENSG00000131779|O96011-2|PEX11B	37.15910966729921	0.575322462179216	1				NaN	NaN	0	NaN	6765	4937	11703
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11705	35.711	NaN	1613.7	30	0	248.24	0.106	+			27096	MANCLPFY	8	57	516.2204359691324	1030.4263190050647	2	516.2207641601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))ANC(Carbamidomethyl (C))LPFY_	ENSG00000064933|ENST00000441310|PMS1;nc|ENSG00000064933|P54277-2|PMS1;nc|ENSG00000064933|P54277-3|PMS1;nc|ENSG00000064933|P54277-4|PMS1	46.76643321282427	0.6143254112625767	1				NaN	NaN	0	NaN	6766	4937	11703
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11706	35.713	NaN	2435.5	30	0	245.66	0.106	+			36240	SEMKLVQM	8	55	483.24306310419024	964.4715732751805	2	483.2437438964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEMKLVQM_	ENSG00000008838|ENST00000394128|MED24;MED24|p.E720Gfs*14|1|0.41|ENSG00000008838|chr17:40023224-40023225|-/A|frameshift_variant;MED24|p.K704Sfs*8|1|0.18|ENSG00000008838|chr17:40023272-40023272|G/-|frameshift_variant;MED24|p.P805Rfs*53|1|0.29|ENSG00000008838|chr17:40022663-40022663|G/-|frameshift_variant;nc|ENSG00000008838|O75448-2|MED24;THRA-MED24|1|fusion	71.87747018426188	0.391254423828572	1				NaN	NaN	0	NaN	6767	4937	11703
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11707	35.714	NaN	1415	30	0	294.23	0.106	+			7643	DKNITLLH	8	47	477.2744308175525	952.534308701905	2	477.2742004394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DKNITLLH_	DAAM1|p.E1001Dfs*18|1|0.08|ENSG00000100592|chr14:59367574-59367575|-/TGGTTTTAAG|frameshift_variant;ENSG00000100592|ENST00000360909|DAAM1;ENST00000553966.5_1_14:59814299-59830444:+|nuORF;nc|ENSG00000100592|Q9Y4D1-3|DAAM1;nc|ENSG00000100592|Q9Y4D1|DAAM1	116.90359126533652	0.23898233959989007	1				NaN	NaN	0	NaN	6768	4937	11703
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11708	35.716	NaN	3811.6	30	0	1358.9	0.106	+			49902	VYTTMAEHF	9	64	549.750151895077	1097.485750856954	2	549.7515258789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VYTTMAEHF_	ENSG00000117472|ENST00000372003|TSPAN1;TSPAN1|p.T119M|1|0.33|ENSG00000117472|chr1:46184801-46184801|C/T|missense_variant	68.78682469695295	0.14603441672067394	1				NaN	NaN	0	NaN	6769	4937	11703
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11709	35.718	NaN	1609.7	30	0	108.86	0.037	+			10450	EVNKFQMAY	9	65	565.271462975717	1128.5283730182339	2	565.2720947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EVNKFQMAY_	ENSG00000140319|ENST00000267884|SRP14	57.81127852772723	0.2318599694398087	1				NaN	NaN	0	NaN	6770	4937	11703
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11714	35.732	NaN	2518.2	30	0	191.56	0.144	+			45182	TVMNIAEHY	9	62	539.2552269355758	1076.4959009379515	2	539.256591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVMNIAEHY_	ENSG00000106263|ENST00000360876|EIF3B;ENST00000475415.5_1_7:2414943-2418434:+|nuORF;nc|ENSG00000106263|P55884-2|EIF3B	58.22992032128504	0.22837015374068087	1				NaN	NaN	0	NaN	6772	4940	11713
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11721	35.753	NaN	1479.5	30	0	355.98	0.214	+			15737	GVSAATFLK	9	45	447.2583021054847	892.5020512777694	2	447.25787353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVSAATFLK_	ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;nc|ENSG00000184110|Q99613-2|EIF3C	45.97224482568171	0.3502073465782774	1				NaN	NaN	0	NaN	6776	4943	11720
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11722	35.756	NaN	1748.2	30	0	205.99	0.106	+			12372	GDRPLRLCAG	10	63	529.283203125	NaN	0	529.283203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GDRPLRLCAG_	ENST00000439199.1_1_7:23530116-23530830:+|nuORF;ENST00000488906.1_1_17:45236559-45237015:-|nuORF	31.529811441608018	0.39664753963064203	1				NaN	NaN	0	NaN	6777	4943	11720
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11723	35.758	NaN	927.66	30	0	178.87	0.036	+			17798	IETTKVEML	9	50	532.2908325551568	NaN	0	532.29052734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IETTKVEML_	ENSG00000125450|ENST00000245544|NUP85;ENST00000579900.5_1_17:73231554-73231771:+|nuORF;nc|ENSG00000125450|Q9BW27-3|NUP85	32.81241826257853	0.3119040447479903	1				NaN	NaN	0	NaN	6778	4943	11720
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11736	35.796	NaN	4560.6	30	0	2456.9	0.215	+			32544	QVTDFGFAK	9	55	506.7586750661718	1011.5027971991436	2	506.7593688964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QVTDFGFAK_	ENSG00000072062|ENST00000308677|PRKACA;ENSG00000142875|ENST00000370685|PRKACB;ENSG00000165059|ENST00000377276|PRKACG;ENST00000536649.5_1_19:14208073-14223129:-|nuORF;ENST00000587533.1_1_19:14208360-14208546:-|nuORF;nc|ENSG00000072062|P17612-2|PRKACA;nc|ENSG00000142875|P22694-10|PRKACB;nc|ENSG00000142875|P22694-3|PRKACB;nc|ENSG00000142875|P22694-4|PRKACB;nc|ENSG00000142875|P22694-5|PRKACB;nc|ENSG00000142875|P22694-6|PRKACB;nc|ENSG00000142875|P22694-7|PRKACB;nc|ENSG00000142875|P22694-8|PRKACB;nc|ENSG00000142875|P22694-9|PRKACB;nc|ENSG00000142875|P22694|PRKACB	47.657333605630114	0.33044192980041115	1				NaN	NaN	0	NaN	6785	4949	11735
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11737	35.799	NaN	2330.3	30	0	114.48	0.05				-1	LCCCCNCCCGH	11	75	666.6826337135527	NaN	0	666.6844482421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	3 Carbamidomethyl (C)	_LC(Carbamidomethyl (C))C(Carbamidomethyl (C))CCNCCC(Carbamidomethyl (C))GH_	ENSG00000147570|ENST00000276570|DNAJC5B	6.31265097734313	0.456735970842152	1				NaN	NaN	0	NaN	6786	4949	11735
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11742	35.814	NaN	1259.3	30	0	183.03	0.142	+			25328	LPDKTIASL	9	52	479.28463611564155	956.5547192980831	2	479.2845153808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LPDKTIASL_	ENSG00000117625|ENST00000419091|RCOR3;nc|ENSG00000117625|Q9P2K3-2|RCOR3;nc|ENSG00000117625|Q9P2K3-4|RCOR3;nc|ENSG00000117625|Q9P2K3|RCOR3;RCOR3|p.T133Lfs*7|1|0.26|ENSG00000117625|chr1:211278165-211278165|A/-|frameshift_variant	62.107414245175825	0.1960472003779324	1				NaN	NaN	0	NaN	6788	4952	11741
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11748	35.832	NaN	1652.3	30	0	168.85	0.143			+	13213	GIFSWIFY	8	53	516.7627544245016	1031.5109559158032	2	516.7647705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GIFSWIFY_	REV__ADGRL2|p.N1313Kfs*37|1|0.3|ENSG00000117114|chr1:81990701-81990702|-/A|frameshift_variant;REV__ADGRL3|p.H1275Lfs*11|1|0.08|ENSG00000150471|chr4:62070322-62070322|A/-|frameshift_variant;REV__ENSG00000072071|ENST00000361434|ADGRL1;REV__ENSG00000117114|ENST00000686636|ADGRL2;REV__ENSG00000150471|ENST00000683033|ADGRL3;REV__nc|ENSG00000072071|O94910|ADGRL1;REV__nc|ENSG00000117114|O95490-2|ADGRL2;REV__nc|ENSG00000117114|O95490-3|ADGRL2;REV__nc|ENSG00000117114|O95490-4|ADGRL2;REV__nc|ENSG00000117114|O95490-5|ADGRL2;REV__nc|ENSG00000117114|O95490-6|ADGRL2;REV__nc|ENSG00000117114|O95490-7|ADGRL2;REV__nc|ENSG00000117114|O95490|ADGRL2;REV__nc|ENSG00000150471|Q9HAR2-2|ADGRL3;REV__nc|ENSG00000150471|Q9HAR2-4|ADGRL3;REV__nc|ENSG00000150471|Q9HAR2|ADGRL3	37.028477286268924	0.6747514403204248	1				NaN	NaN	0	NaN	6791	4955	11747
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11755	35.852	NaN	1601.1	30	0	142.87	0.144			+	898	AEHQTFINF	9	58	553.7671452200983	1105.5197375069965	2	553.76904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEHQTFINF_	REV__nc|ENSG00000143322|P42684-6|ABL2;REV__nc|ENSG00000143322|P42684-7|ABL2;REV__nc|ENSG00000143322|P42684-8|ABL2	32.81241826257853	0.4965981579233955	1				NaN	NaN	0	NaN	6795	4958	11754
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11762	35.872	NaN	897.03	30	0	118.77	0.144	+			49720	VYNENLVHM	9	47	559.7692484128142	1117.5239438924284	2	559.7703247070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYNENLVHM_	ENSG00000116752|ENST00000369541|BCAS2;ENST00000425064.1_1_1:100858662-100858893:-|nuORF	82.24051045832904	0.08786059719216216	1				NaN	NaN	0	NaN	6799	4961	11761
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11780	35.93	NaN	1451.6	30	0	164.78	0.143	+			25267	LNNKFTSF	8	50	485.75368616225626	969.4928193913125	2	485.75335693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LNNKFTSF_	KRT71|p.A142T|1|0.27|ENSG00000139648|chr12:52552654-52552654|C/T|missense_variant	50.0245360154114	0.5941082100236891	1				NaN	NaN	0	NaN	6808	4970	11779
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11801	35.993	NaN	3050.1	30	0	860.4	0.145	+			51008	YIYDGELVSK	10	60	593.8027210681298	1185.5908892030595	2	593.8040161132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YIYDGELVSK_	ENSG00000117620|ENST00000533028|SLC35A3;nc|ENSG00000283761|Q9Y2D2-2|SLC35A3	54.722347961057174	0.4138398245444204	1				NaN	NaN	0	NaN	6820	4979	11800
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11809	36.015	NaN	4518.6	30	0	1219.8	0.214	+			45357	TVTAQILLK	9	57	493.815966340031	985.6173797468621	2	493.8163757324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVTAQILLK_	ENSG00000178982|ENST00000248342|EIF3K;ENST00000514461.1_1_4:116964948-116965134:-|nuORF;ENST00000586932.5_1_19:39109833-39116793:+|nuORF;ENST00000593062.5_1_19:39109833-39121488:+|nuORF;nc|ENSG00000178982|Q9UBQ5-2|EIF3K	86.88156770896713	0.07365720931774442	1				NaN	NaN	0	NaN	6825	4982	11808
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11810	36.018	NaN	2007.1	30	0	930.66	0.034	+			35347	SAPFVARAL	9	53	466.27166500536174	930.5287770775235	2	466.271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAPFVARAL_	ENSG00000104866|ENST00000221462|PPP1R37	25.57405402267927	0.5642445186134241	1				NaN	NaN	0	NaN	6826	4982	11808
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11816	36.034	NaN	5432.7	30	0	960.93	0.142	+			27097	MANGAVIHL	9	60	463.2496473609751	924.4847417887502	2	463.2499694824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MANGAVIHL_	ENSG00000099995|ENST00000215793|SF3A1;nc|ENSG00000099995|Q15459-2|SF3A1	138.4795579985376	0.011193365975340062	1				NaN	NaN	0	NaN	6829	4985	11815
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11822	36.052	NaN	1968.5	30	0	302.78	0.214	+			50045	WELEGPQVP	9	58	527.7650008426908	1053.5154487521816	2	527.7652587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WELEGPQVP_	ENSG00000174010|ENST00000328046|KLHL15	38.80614096846853	0.43426287593479557	1				NaN	NaN	0	NaN	6832	4988	11821
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11823	36.056	NaN	1198.9	30	0	130.61	0.106	+			48109	VSTVGIDFK	9	52	483.26888688219947	964.523220831199	2	483.2685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSTVGIDFK_	ENSG00000105514|ENST00000222120|RAB3D;ENSG00000105649|ENST00000222256|RAB3A;ENSG00000152932|ENST00000282878|RAB3C;ENSG00000169213|ENST00000371655|RAB3B	66.96192283764107	0.15557981141143568	1				NaN	NaN	0	NaN	6833	4988	11821
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11824	36.058	NaN	1801.5	30	0	163.65	0.035	+			5994	AVLTQLLSM	9	56	488.27869807821196	974.5428432232239	2	488.7764892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVLTQLLSM_	ENSG00000151062|ENST00000382722|CACNA2D4;ENST00000280663.12_1_12:1909550-1953688:-|nuORF;ENST00000542340.1_1_12:1909550-1920875:-|nuORF;nc|ENSG00000151062|Q7Z3S7-2|CACNA2D4;nc|ENSG00000151062|Q7Z3S7-4|CACNA2D4;nc|ENSG00000151062|Q7Z3S7-5|CACNA2D4;nc|ENSG00000151062|Q7Z3S7-6|CACNA2D4	47.91560031466742	0.327412564698279	1				NaN	NaN	0	NaN	6834	4988	11821
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11831	36.075	NaN	1464.7	30	0	495.06	0.214			+	29290	NYIRRCRE	8	55	555.2866399861897	1108.5587270391793	2	555.2872314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NYIRRCRE_	REV__ENSG00000266472|ENST00000614145|MRPS21	38.80614096846853	0.6637206697844082	1				NaN	NaN	0	NaN	6838	4991	11830
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11832	36.079	NaN	1795.6	30	0	289.23	0.106	+			42238	TAAPGRFSF	9	54	477.2454839760447	952.4764150188894	2	477.2448425292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAAPGRFSF_	DCTPP1|p.E15D|1|0.42|ENSG00000179958|chr16:30429936-30429936|C/A|missense_variant;DCTPP1|p.Q82Kfs*25|1|0.35|ENSG00000179958|chr16:30424502-30424502|G/-|frameshift_variant;ENSG00000179958|ENST00000319285|DCTPP1;ENST00000565758.1_1_16:30441199-30441310:-|nuORF	56.43379154798735	0.2433427591689151	1				NaN	NaN	0	NaN	6839	4991	11830
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11833	36.081	NaN	1750.4	30	0	442.6	0.106	+			21349	KLYQVISTP	9	63	524.8052703087596	1047.5959876843192	2	524.80615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KLYQVISTP_	ENSG00000132356|ENST00000397128|PRKAA1;ENSG00000162409|ENST00000371244|PRKAA2;nc|ENSG00000132356|Q13131-2|PRKAA1;PRKAA2|p.F540Lfs*7|1|0.23|ENSG00000162409|chr1:56707668-56707668|T/-|frameshift_variant;PRKAA2|p.F90Lfs*3|4|0.22|ENSG00000162409|chr1:56691421-56691421|T/-|frameshift_variant	32.81241826257853	0.4965981579233955	1				NaN	NaN	0	NaN	6840	4991	11830
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11834	36.083	NaN	3741.6	30	0	2446.9	0.045			+	50103	WGRWWFWLERR	11	58	559.9552940679147	1676.844052803944	3	559.955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_WGRWWFWLERR_	REV__ENST00000246635.7_1_17:39661629-39661743:-|nuORF	3.211326085083802	0.8683767028876275	1				NaN	NaN	0	NaN	6841	4991	11830
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11845	36.108	NaN	5269.6	30	0	1328.2	0.214	+			17096	HSGPVIPVY	9	57	484.7635964112824	967.5126398893648	2	484.7637939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HSGPVIPVY_	ENSG00000114315|ENST00000232424|HES1	47.91560031466742	0.327412564698279	1				NaN	NaN	0	NaN	6849	4994	11844
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11846	36.112	NaN	2639.7	30	0	298.63	0.106	+			10374	EVAKVIVSM	9	64	488.27869807821196	974.5428432232239	2	488.28106689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EVAKVIVSM_	AKAP9|p.Q3083Nfs*28|1|0.15|ENSG00000127914|chr7:92089389-92089390|-/TGAATATCAAGCAGCTATGGAATGCC|frameshift_variant;AKAP9|p.T1942Lfs*3|3|0.18|ENSG00000127914|chr7:92062328-92062328|A/-|frameshift_variant;ENSG00000127914|ENST00000356239|AKAP9;ENST00000493453.1_1_7:91570251-91670224:+|nuORF;nc|ENSG00000127914|Q99996-1|AKAP9;nc|ENSG00000127914|Q99996-3|AKAP9;nc|ENSG00000127914|Q99996-4|AKAP9;nc|ENSG00000127914|Q99996-5|AKAP9;nc|ENSG00000127914|Q99996-6|AKAP9	98.62937762414208	0.04060045538121712	1				NaN	NaN	0	NaN	6850	4994	11844
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11847	36.114	NaN	1355.1	30	0	122.01	0.035			+	-1	SVLGGPCGALL	11	56	522.2799960071438	NaN	0	522.2802734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SVLGGPC(Carbamidomethyl (C))GALL_	REV__ENST00000281273.8_1_3:113775683-113775913:+|nuORF	42.396135135203025	0.3699325281549567	1				NaN	NaN	0	NaN	6851	4994	11844
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11854	36.131	NaN	3224.8	30	0	1016.3	0.214	+			18972	IVSDFTIGR	9	61	504.2794304564773	1006.5443079797546	2	504.279541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IVSDFTIGR_	ENSG00000110713|ENST00000324932|NUP98;nc|ENSG00000110713|P52948-2|NUP98;nc|ENSG00000110713|P52948-3|NUP98;nc|ENSG00000110713|P52948-4|NUP98;nc|ENSG00000110713|P52948-6|NUP98;nc|ENSG00000110713|P52948|NUP98;NUP98|p.N1328Tfs*89|2|0.22|ENSG00000110713|chr11:3699159-3699159|T/-|frameshift_variant	107.00750918261382	0.032051501805654005	1				NaN	NaN	0	NaN	6855	4997	11853
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11855	36.135	NaN	2735.5	30	0	688.37	0.106	+			10279	ETLTLQKI	8	57	473.28403340428355	944.5535138753671	2	473.2839660644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ETLTLQKI_	ENSG00000168077|ENST00000301904|SCARA3;nc|ENSG00000168077|Q6AZY7-2|SCARA3	68.78682469695295	0.41700713582915416	1				NaN	NaN	0	NaN	6856	4997	11853
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11856	36.137	NaN	3275.1	30	0	807.25	0.106	+			43363	TGEAMLVIK	9	54	481.2732872722758	960.5320216113516	2	481.2724304199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TGEAMLVIK_	tr|U7T480|U7T480_FUSNUhistidinekinaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00375PE=4SV=1	87.69643885390035	0.07135982304947239	1				NaN	NaN	0	NaN	6857	4997	11853
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11857	36.139	NaN	3737	30	0	721.13	0.106			+	17959	IGSTNFFK	8	59	457.24240072536406	912.4702485175281	2	457.24188232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IGSTNFFK_	REV__tr|U7SZE0|U7SZE0_FUSNUArsenatereductaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00789PE=3SV=1	55.50420428727701	0.5462892107279674	1				NaN	NaN	0	NaN	6858	4997	11853
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11858	36.14	NaN	2786	30	0	480.83	0.106			+	-1	MVGEKWIAV	9	61	524.7764902088206	1047.5384274844412	2	524.7772827148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_M(Oxidation (M))VGEKWIAV_	REV__ENSG00000162643|ENST00000294664|DNAI3;REV__nc|ENSG00000162643|Q8IWG1-2|DNAI3	51.33545320467046	0.2872990594074956	1				NaN	NaN	0	NaN	6859	4997	11853
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11859	36.142	NaN	1656.7	30	0	181.53	0.035	+			44438	TSMLYVVGK	9	51	499.2727078499744	NaN	0	499.2728271484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TSMLYVVGK_	ENSG00000106789|ENST00000375077|CORO2A	64.20726635412375	0.13137488984569443	1				NaN	NaN	0	NaN	6860	4997	11853
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11863	36.157	NaN	2325.8	30	0	308.5	0.144			+	25549	LPVMGSDERA	10	64	545.7632983557926	1089.512043778385	2	545.7640380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LPVM(Oxidation (M))GSDERA_	REV__ENSG00000156030|ENST00000423556|MIDEAS;REV__nc|ENSG00000156030|Q6PJG2|MIDEAS	63.30626980617807	0.33577009411590547	1				NaN	NaN	0	NaN	6861	5000	11862
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11880	36.213	NaN	2674.3	30	0	368.27	0.141	+			46205	VEAGGMQAL	9	50	438.21818308519164	874.4218132371833	2	438.2181701660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VEAGGMQAL_	ENSG00000168036|ENST00000349496|CTNNB1;ENSG00000173801|ENST00000393931|JUP	87.69643885390035	0.07135982304947239	1				NaN	NaN	0	NaN	6869	5009	11879
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11896	36.278	NaN	3037.6	30	0	446.05	0.214	+			28753	NPALENLVY	9	56	516.7718616624132	1031.5291703916264	2	516.7718505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NPALENLVY_	ENSG00000128298|ENST00000381669|BAIAP2L2;nc|ENSG00000128298|Q6UXY1-2|BAIAP2L2	56.72105179125745	0.24094814563026265	1				NaN	NaN	0	NaN	6873	5021	11895
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11897	36.281	NaN	2204.4	30	0	312.28	0.034	+			48214	VTASSPVAVL	10	49	472.2768569932898	942.5391610533796	2	472.27728271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTASSPVAVL_	ENSG00000275395|ENST00000616721|FCGBP;FCGBP-ACSS2|1|fusion;nc|ENSG00000275395|Q9Y6R7|FCGBP	79.45101966838831	0.2001060845487004	1				NaN	NaN	0	NaN	6874	5021	11895
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11904	36.299	NaN	4031.8	30	0	1119.2	0.143	+			28997	NSNDVFVLK	9	65	518.2773030443036	1034.5400531554071	2	518.2774658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NSNDVFVLK_	ENSG00000006747|ENST00000297029|SCIN;ENSG00000127831|ENST00000248444|VIL1;nc|ENSG00000006747|Q9Y6U3-3|SCIN	52.936696900407355	0.27249468807391813	1				NaN	NaN	0	NaN	6878	5024	11903
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11910	36.318	NaN	3268.7	30	0	661.08	0.214	+			15389	GTYDILVTK	9	61	505.2819333150459	1008.5493136968918	2	505.2821960449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTYDILVTK_	ENSG00000114302|ENST00000265563|PRKAR2A;nc|ENSG00000114302|P13861-2|PRKAR2A	104.01359247289065	0.03510646158778409	1				NaN	NaN	0	NaN	6881	5027	11909
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11911	36.321	NaN	1071.2	30	0	124.63	0.034				-1	 	0	52	477.23330879773346	476.22603233113347	1	477.2318420410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	6882	5027	11909
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11919	36.352	NaN	1309	30	0	149.88	0.144				-1	IHTATMQVY	9	57	540.2633014822317	NaN	0	540.2632446289062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_IHTATM(Oxidation (M))QVY_	ENST00000484556.1_1_6:30866836-30867070:+|nuORF	44.116797842482775	0.2472372736944149	1				NaN	NaN	0	NaN	6884	5033	11918
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11927	36.374	NaN	1428.3	30	0	100.76	0.143			+	29436	PCGPAEWLL	9	59	493.2427759340314	984.4709989348628	2	493.24298095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PCGPAEWLL_	REV__ENST00000527711.5_3_6:125475012-125541239:+|nuORF	44.53106598305862	0.36711179743858174	1				NaN	NaN	0	NaN	6889	5036	11926
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11936	36.398	NaN	3332.8	30	0	595.37	0.214	+			43376	TGFNGKLVY	9	60	499.7693259906085	997.524099048017	2	499.76953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TGFNGKLVY_	ENSG00000083857|ENST00000441802|FAT1;FAT1|p.G2934Vfs*3|2|0.37|ENSG00000083857|chr4:186617787-186617787|T/-|frameshift_variant;FAT1|p.K1225Nfs*9|1|0.03|ENSG00000083857|chr4:186636885-186636885|G/-|frameshift_variant;FAT1|p.N3847Yfs*7|1|0.03|ENSG00000083857|chr4:186601370-186601371|-/TTATA|frameshift_variant;FAT1|p.P3228Lfs*42|1|0.27|ENSG00000083857|chr4:186611556-186611556|G/-|frameshift_variant;FAT1|p.P4313Lfs*36|1|0.34|ENSG00000083857|chr4:186596602-186596602|G/-|frameshift_variant;FAT1|p.Q2933Hfs*14|1|0.33|ENSG00000083857|chr4:186617787-186617788|-/G|frameshift_variant;FAT1|p.T1364Yfs*8|1|0.23|ENSG00000083857|chr4:186636118-186636119|-/A|frameshift_variant;FAT1|p.V1878Cfs*8|2|0.22|ENSG00000083857|chr4:186620955-186620956|-/G|frameshift_variant	58.22992032128504	0.22837015374068087	1				NaN	NaN	0	NaN	6895	5039	11935
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11937	36.401	NaN	3047.5	30	0	1095.3	0.036	+			32219	QTAQIFFTK	9	60	542.2952043687826	1082.5758558043651	2	542.7977905273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QTAQIFFTK_	ENSG00000167778|ENST00000301463|SPRYD3	46.45678178249821	0.34452392205506005	1				NaN	NaN	0	NaN	6896	5039	11935
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11946	36.421	NaN	1526.5	30	0	134.03	0.143	+			44627	TTFLLPGQK	9	56	502.7929736715356	NaN	0	502.79327392578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTFLLPGQK_	ENSG00000074964|ENST00000361221|ARHGEF10L;ENST00000469726.5_1_1:17942561-18023872:+|nuORF;nc|ENSG00000074964|Q9HCE6-2|ARHGEF10L;nc|ENSG00000074964|Q9HCE6-3|ARHGEF10L;nc|ENSG00000074964|Q9HCE6-4|ARHGEF10L	68.78682469695295	0.1118430353446351	1				NaN	NaN	0	NaN	6902	5042	11945
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11952	36.44	NaN	1141.8	30	0	169.9	0.141	+			17244	HVVPPDSP	8	42	424.2191346954951	NaN	0	424.2193908691406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HVVPPDSP_	ENST00000538576.5_1_1:113498038-113498314:-|nuORF	26.79610172149135	1.7418937515398478	1				NaN	NaN	0	NaN	6905	5045	11951
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11958	36.458	NaN	1231.7	30	0	145.13	0.142	+			48537	VTNVTSLLK	9	49	487.7980704672044	973.5815880012088	2	487.7979736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTNVTSLLK_	ENSG00000137076|ENST00000314888|TLN1;ENSG00000171914|ENST00000636159|TLN2;nc|ENSG00000137076|Q9Y490-2|TLN1	68.84614121027924	0.14577793175421136	1				NaN	NaN	0	NaN	6908	5048	11957
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11966	36.48	NaN	3157.2	30	0	338.26	0.143	+			51155	YPAQGVQQF	9	64	519.2564921392176	1036.498431345235	2	519.2567749023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YPAQGVQQF_	EIF4G1|p.P1229Qfs*2|1|0.18|ENSG00000114867|chr3:184327606-184327606|C/-|frameshift_variant;EIF4G1|p.T436Hfs*40|1|0.21|ENSG00000114867|chr3:184321883-184321884|-/C|frameshift_variant;ENSG00000114867|ENST00000346169|EIF4G1;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1	90.77665401227738	0.06267569666681755	1				NaN	NaN	0	NaN	6913	5051	11965
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11980	36.521	NaN	4540.5	30	0	1114.9	0.214	+			14486	GTCLFVAVK	9	63	497.7732463731238	993.5319398130476	2	497.773193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GTC(Carbamidomethyl (C))LFVAVK_	ENSG00000198752|ENST00000361246|CDC42BPB	110.11987700582712	0.028875675806141952	1				NaN	NaN	0	NaN	6921	5057	11979
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11981	36.525	NaN	994.37	30	0	243.98	0.034	+			28927	NRGVRLKA	8	41	457.28914278534813	NaN	0	457.28948974609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NRGVRLKA_	ENSG00000089154|ENST00000300648|GCN1	18.324413293986947	1.7418937515398478	1				NaN	NaN	0	NaN	6922	5057	11979
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11986	36.539	NaN	1517.2	30	0	253.43	0.145			+	33339	RGWGRQLRL	9	45	571.3380696608567	1140.6615863885133	2	571.8402709960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RGWGRQLRL_	REV__ENST00000591390.1_1_19:640215-640473:+|nuORF	34.172542307311794	0.4838870758800184	1				NaN	NaN	0	NaN	6924	5060	11985
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11993	36.558	NaN	858.01	30	0	145.07	0.142	+			28126	NAISVTTSY	9	38	478.2398484997552	NaN	0	478.2399597167969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAISVTTSY_	ENSG00000198730|ENST00000361367|CTR9	56.72105179125745	0.16330365735109603	1				NaN	NaN	0	NaN	6928	5063	11992
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11997	36.575	NaN	1857.5	30	0	295.17	0.214	+			38509	SSAWHAPPV	9	41	476.2378142204534	950.4610755077068	2	476.2380065917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSAWHAPPV_	ENSG00000196843|ENST00000357485|ARID5A;ENST00000497920.1_1_2:97215573-97218047:+|nuORF;nc|ENSG00000196843|Q03989-5|ARID5A	33.51558372728122	0.4900267029546261	1				NaN	NaN	0	NaN	6929	5066	11996
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11998	36.578	NaN	1247.4	30	0	134.49	0.034	+			36440	SEVELMKV	8	50	467.74935544314394	933.4841579530879	2	467.74908447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEVELMKV_	ENSG00000115758|ENST00000234111|ODC1	84.9155231211612	0.2928622555056503	1				NaN	NaN	0	NaN	6930	5066	11996
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12011	36.616	NaN	1625.8	30	0	167.67	0.143	+			45598	TYPDVNNSI	9	49	511.7430041145936	1021.4714552959872	2	511.74371337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TYPDVNNSI_	ENSG00000122958|ENST00000263559|VPS26A;nc|ENSG00000122958|O75436-2|VPS26A	77.31757898189308	0.1091473830098891	1				NaN	NaN	0	NaN	6937	5072	12010
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12021	36.665	NaN	1554.4	30	0	419.75	0.143	+			2129	ALILLDSQL	9	48	493.3004208380223	NaN	0	493.3004150390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ALILLDSQL_	ENSG00000184954|ENST00000327335|OR6C70;OR6C70|p.Y102Lfs*18|1|0.52|ENSG00000184954|chr12:55469834-55469835|-/A|frameshift_variant;OR6C70|p.Y102Tfs*12|1|0.32|ENSG00000184954|chr12:55469835-55469835|A/-|frameshift_variant	26.063383197487333	0.34597851983111116	1				NaN	NaN	0	NaN	6938	5081	12020
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12030	36.698	NaN	1919	30	0	345.25	0.143	+			41681	SVSDIIVVAK	10	52	515.8105458999125	1029.606538866625	2	515.8114624023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSDIIVVAK_	ENSG00000006042|ENST00000579849|TMEM98;ENST00000583120.1_1_17:31258522-31263466:+|nuORF	92.23892857375223	0.11825556496531454	1				NaN	NaN	0	NaN	6941	5087	12029
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12042	36.738	NaN	1097.7	30	0	386.82	0.138	+			46703	VGLGLVGG	8	28	336.20796707010334	670.4013812070067	2	336.2079772949219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VGLGLVGG_	ARFGEF1|p.F1680Lfs*8|1|0.29|ENSG00000066777|chr8:67203171-67203171|A/-|frameshift_variant;ENSG00000066777|ENST00000262215|ARFGEF1;REV__PLEKHG2|p.S141G|1|0.09|ENSG00000090924|chr19:39415381-39415381|A/G|missense_variant	43.626045697637714	0.6338121648150432	1				NaN	NaN	0	NaN	6947	5093	12041
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12051	36.773	NaN	1544.9	30	0	175.13	0.214	+			36944	SILNNPIVK	9	50	499.3055270181111	996.5965011030222	2	499.3052673339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SILNNPIVK_	ENSG00000162664|ENST00000340281|ZNF326;ENST00000394583.7_1_1:90470639-90493257:+|nuORF;nc|ENSG00000162664|Q5BKZ1-3|ZNF326;ZNF326|p.A460V|1|0.18|ENSG00000162664|chr1:90022323-90022323|C/T|missense_variant	36.446750945000026	0.4619375763483977	1				NaN	NaN	0	NaN	6950	5099	12050
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12052	36.776	NaN	1439.9	30	0	124.18	0.034			+	24351	LFLTSNLL	8	50	460.7761716808654	NaN	0	460.7748718261719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LFLTSNLL_	REV__ENSG00000155256|ENST00000684270|ZFYVE27;REV__nc|ENSG00000155256|Q5T4F4-2|ZFYVE27;REV__nc|ENSG00000155256|Q5T4F4-3|ZFYVE27;REV__nc|ENSG00000155256|Q5T4F4-4|ZFYVE27;REV__nc|ENSG00000155256|Q5T4F4-5|ZFYVE27;REV__nc|ENSG00000155256|Q5T4F4-6|ZFYVE27;REV__nc|ENSG00000155256|Q5T4F4-7|ZFYVE27;REV__nc|ENSG00000155256|Q5T4F4-8|ZFYVE27;REV__ZFYVE27|p.K254Efs*26|1|0.39|ENSG00000155256|chr10:97750419-97750420|-/G|frameshift_variant	57.81127852772723	1.7418937515398478	1				NaN	NaN	0	NaN	6951	5099	12050
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12061	36.809	NaN	1288.9	30	0	238.57	0.142			+	48676	VTSVAMLPK	9	48	481.2729964300773	960.5314399269546	2	481.2728576660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_VTSVAM(Oxidation (M))LPK_	REV__ENSG00000198792|ENST00000361906|TMEM184B;REV__ENST00000436674.5_1_22:38617478-38642853:-|nuORF;REV__ENST00000474416.1_1_22:38622784-38627359:-|nuORF	60.97194046774394	0.20551255781574032	1				NaN	NaN	0	NaN	6954	5105	12060
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12076	36.863	NaN	1927.5	30	0	413.35	0.215	+			49053	VVINYSIVK	9	62	517.8162286927742	1033.6179044523483	2	517.8167114257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVINYSIVK_	ENSG00000196405|ENST00000392920|EVL;ENST00000554460.5_1_14:100540857-100568654:+|nuORF;ENST00000556921.1_1_14:100551177-100572452:+|nuORF;ENST00000557637.1_1_14:100531783-100564000:+|nuORF;EVL|p.P188Hfs*41|1|0.18|ENSG00000196405|chr14:100128589-100128590|-/CC|frameshift_variant;nc|ENSG00000196405|Q9UI08-3|EVL;nc|ENSG00000196405|Q9UI08-4|EVL;nc|ENSG00000196405|Q9UI08-5|EVL;nc|ENSG00000196405|Q9UI08|EVL	41.42661286455405	0.403525789677298	1				NaN	NaN	0	NaN	6960	5114	12075
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12077	36.866	NaN	1328.3	30	0	158.29	0.036			+	-1	GQGIPNMITY	10	55	555.2670045095812	1108.5194560859622	2	555.2666625976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_GQGIPNM(Oxidation (M))ITY_	REV__ENSG00000130511|ENST00000270061|SSBP4;REV__ENST00000600244.5_1_19:18542527-18543889:+|nuORF;REV__nc|ENSG00000130511|Q9BWG4-2|SSBP4;REV__SSBP4|p.A300T|1|0.19|ENSG00000130511|chr19:18433029-18433029|G/A|missense_variant	39.252832667884924	0.5560298534376815	1				NaN	NaN	0	NaN	6961	5114	12075
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12084	36.884	NaN	1794.3	30	0	471.51	0.142			+	46787	VHINEIGM	8	52	456.7339459587863	911.4533389843726	2	456.7343444824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VHINEIGM_	REV__ENSG00000102043|ENST00000374852|MTMR8;REV__ENST00000461403.1_1_X:63557232-63569902:-|nuORF;REV__nc|ENSG00000102043|Q96EF0-2|MTMR8	50.0245360154114	0.5941082100236891	1				NaN	NaN	0	NaN	6965	5117	12083
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12092	36.906	NaN	2145.1	30	0	306.34	0.214	+			42206	TAAGLMHTF	9	54	474.73401074224824	947.4534685512965	2	474.7339172363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAAGLMHTF_	ENSG00000086475|ENST00000327347|SEPHS1;ENSG00000179918|ENST00000478753|SEPHS2;ENST00000446112.1_1_X:72989760-72990255:+|nuORF;nc|ENSG00000086475|P49903-3|SEPHS1;nc|ENSG00000086475|P49903-4|SEPHS1	90.36981228632155	0.0638227155548745	1				NaN	NaN	0	NaN	6970	5120	12091
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12093	36.91	NaN	2083.9	30	0	326.06	0.106	+			46770	VGVFLRPR	8	59	472.2948787919782	942.5752046507564	2	472.294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VGVFLRPR_	ENST00000537502.5_1_20:24988246-24988372:-|nuORF	35.200714571348534	0.6875396545722289	1				NaN	NaN	0	NaN	6971	5120	12091
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12094	36.912	NaN	3205.4	30	0	359.19	0.106	+			11831	FSVTGRVL	8	52	439.7581664221691	877.5017799111382	2	439.75848388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FSVTGRVL_	ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;nc|ENSG00000185164|Q5JPE7-3|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2;NOMO1|p.P1102Hfs*42|1|0.36|ENSG00000103512|chr16:14886838-14886838|C/-|frameshift_variant	69.6276240434122	0.4100012001731381	1				NaN	NaN	0	NaN	6972	5120	12091
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12095	36.913	NaN	1882.8	30	0	271.53	0.106			+	42430	TALGAVLVGL	10	52	457.2894182732438	912.5642836132877	2	457.28955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TALGAVLVGL_	REV__ENSG00000132677|ENST00000537040|RHBG;REV__ENST00000451864.6_1_1:156351301-156354326:+|nuORF;REV__nc|ENSG00000132677|Q9H310-2|RHBG;REV__nc|ENSG00000132677|Q9H310-3|RHBG;REV__nc|ENSG00000132677|Q9H310-4|RHBG;REV__nc|ENSG00000132677|Q9H310-5|RHBG	31.954861631926434	0.6188749698950511	1				NaN	NaN	0	NaN	6973	5120	12091
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12096	36.915	NaN	856.16	30	0	74.695	0.106			+	26738	LVLSHKEL	8	46	469.7868912434877	937.5592295537754	2	469.78680419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LVLSHKEL_	REV__ENST00000439182.2_1_2:47762033-47762180:+|nuORF	37.15910966729921	0.6739408393984688	1				NaN	NaN	0	NaN	6974	5120	12091
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12097	36.917	NaN	990.9	30	0	126.66	0.036				-1	SKRFKNCF	8	50	543.7774658203125	NaN	0	543.7774658203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_SKRFKNC(Carbamidomethyl (C))F_	ENSG00000136160|ENST00000646607|EDNRB;nc|ENSG00000136160|P24530-2|EDNRB;nc|ENSG00000136160|P24530-3|EDNRB	29.14955571784316	1.7418937515398478	1				NaN	NaN	0	NaN	6975	5120	12091
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12102	36.931	NaN	1124.2	30	0	178.97	0.214	+			28028	NAAEIKLTM	9	51	495.76812375639406	NaN	0	495.7686767578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAAEIKLTM_	ENSG00000174780|ENST00000642900|SRP72;ENST00000580060.1_1_18:47022337-47022472:-|nuORF;nc|ENSG00000174780|O76094-2|SRP72	36.446750945000026	0.29355505452396785	1				NaN	NaN	0	NaN	6977	5123	12101
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12103	36.935	NaN	1647.2	30	0	224.7	0.036	+			6031	AVMGAYVLLK	10	53	540.8102824795748	1079.6060120259494	2	541.3126831054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_AVM(Oxidation (M))GAYVLLK_	ENSG00000166562|ENST00000587834|SEC11C;ENST00000591406.1_1_18:56822908-56825914:+|nuORF	45.9519527083369	0.4943008177357963	1				NaN	NaN	0	NaN	6978	5123	12101
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12108	36.949	NaN	2879.3	30	0	449.97	0.214				-1	SLYAVLCSV	9	59	506.2637174407264	1010.5128819482528	2	506.2645568847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SLYAVLC(Carbamidomethyl (C))SV_	ENST00000269187.9_2_18:33689464-33689494:-|nuORF	38.80614096846853	0.43426287593479557	1				NaN	NaN	0	NaN	6980	5126	12107
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12109	36.953	NaN	978.6	30	0	78.497	0.033			+	32273	QTLVLQSL	8	47	451.27188506378405	NaN	0	451.271728515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QTLVLQSL_	REV__nc|ENSG00000211637|A0A075B6H9|IGLV4-69	60.11826168202944	1.7418937515398478	1				NaN	NaN	0	NaN	6981	5126	12107
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12116	36.971	NaN	1154	30	0	71.859	0.214	+			28063	NAATIKDVF	9	47	489.76651535045863	977.5184777677173	2	489.7667541503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAATIKDVF_	ENSG00000005700|ENST00000306270|IBTK;ENST00000369751.2_1_6:82901346-82950269:-|nuORF;ENST00000505222.5_1_6:82901346-82950269:-|nuORF;IBTK|p.F642Vfs*29|1|0.2|ENSG00000005700|chr6:82214507-82214508|-/C|frameshift_variant;IBTK|p.K1213Sfs*50|1|0.13|ENSG00000005700|chr6:82181966-82181966|T/-|frameshift_variant;IBTK|p.M1160*|1|0.13|ENSG00000005700|chr6:82191170-82191170|T/-|frameshift_variant;IBTK|p.Q590Sfs*9|1|0.41|ENSG00000005700|chr6:82214663-82214664|-/A|frameshift_variant;IBTK|p.Y96Mfs*11|1|0.09|ENSG00000005700|chr6:82240201-82240201|A/-|frameshift_variant;nc|ENSG00000005700|Q9P2D0-2|IBTK	37.50817390946774	0.44948750990682723	1				NaN	NaN	0	NaN	6985	5129	12115
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12117	36.975	NaN	1559.2	30	0	144.52	0.035	+			45599	TYPDVNNSI	9	60	511.7430041145936	1021.4714552959872	2	511.7432861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TYPDVNNSI_	ENSG00000122958|ENST00000263559|VPS26A;nc|ENSG00000122958|O75436-2|VPS26A	90.36981228632155	0.0638227155548745	1				NaN	NaN	0	NaN	6986	5129	12115
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12122	36.989	NaN	1566	30	0	194.62	0.214				-1	MLLFRGPR	8	59	516.2935117271991	1030.572470521198	2	516.2946166992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))MLLFRGPR_	ENST00000233638.7_1_2:74741778-74741835:+|nuORF	33.51558372728122	0.7005509609380386	1				NaN	NaN	0	NaN	6988	5132	12121
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12123	36.993	NaN	2357.7	30	0	848.23	0.036	+			30359	PVEFATKKAN	10	60	552.8059377158324	1103.5973224984648	2	552.8067626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PVEFATKKAN_	tr|U7T780|U7T780_FUSNUPyruvate:ferredoxin(Flavodoxin)oxidoreductaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00146PE=3SV=1	32.75053402867276	0.6123771875927935	1				NaN	NaN	0	NaN	6989	5132	12121
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12128	37.007	NaN	1902.2	30	0	342.15	0.214	+			41584	SVQGIIIYR	9	57	524.8108618069442	1047.6071706806883	2	524.811767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVQGIIIYR_	ENSG00000005022|ENST00000317881|SLC25A5;ENSG00000151729|ENST00000281456|SLC25A4;ENSG00000169100|ENST00000381401|SLC25A6;ENST00000406156.2_1_6:121975405-121975696:+|nuORF;ENST00000435239.1_1_7:32511604-32512018:+|nuORF	85.86182877749512	0.07653218437724067	1				NaN	NaN	0	NaN	6991	5135	12127
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12129	37.011	NaN	2534.2	30	0	505.51	0.034	+			41211	SVLEGVLSK	9	47	466.2766683666932	930.5387838001864	2	466.27667236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVLEGVLSK_	CADPS2|p.N1185Tfs*15|1|0.4|ENSG00000081803|chr7:122345632-122345632|T/-|frameshift_variant;ENSG00000081803|ENST00000449022|CADPS2;nc|ENSG00000081803|Q86UW7-2|CADPS2;nc|ENSG00000081803|Q86UW7-3|CADPS2	85.16082228582465	0.07850854922700509	1				NaN	NaN	0	NaN	6992	5135	12127
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12134	37.025	NaN	1650.4	30	0	134.68	0.143	+			50921	YGPGVSTDDI	10	61	512.2353515625	NaN	0	512.2353515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YGPGVSTDDI_	DCC|p.R603C|1|0.27|ENSG00000187323|chr18:53207763-53207763|C/T|missense_variant;ENSG00000187323|ENST00000442544|DCC	42.396135135203025	0.3536752194735987	1				NaN	NaN	0	NaN	6994	5138	12133
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12139	37.042	NaN	1781.8	30	0	258.45	0.142	+			159	AAISLAFSK	9	57	454.266255148734	906.517957364268	2	454.26611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAISLAFSK_	ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A;TOP2A|p.K1199Efs*11|1|0.23|ENSG00000131747|chr17:40396408-40396409|-/C|frameshift_variant;TOP2A|p.T1205Hfs*19|4|0.35|ENSG00000131747|chr17:40396390-40396390|T/-|frameshift_variant	67.49366992349736	0.1516260258713357	1				NaN	NaN	0	NaN	6996	5141	12138
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12146	37.062	NaN	1127.4	30	0	252.15	0.139			+	18869	IVGPGSSK	8	27	372.71747890931647	NaN	0	372.71771240234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IVGPGSSK_	REV__chr14:35294529-35307994|248|14.54|0.0|20.47|+|0|TE_info:MIR,MIR_dup134546,MIR,SINE,donor,+,35294443,35294529|None,PSMA6|1	13.775330524044264	1.7418937515398478	1				NaN	NaN	0	NaN	7000	5144	12145
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12151	37.078	NaN	2524.5	30	0	434.39	0.214	+			18923	IVNDFAYMK	9	64	550.7762993178126	1099.538045702425	2	551.2783813476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IVNDFAYMK_	ENSG00000170348|ENST00000303575|TMED10;ENST00000534816.1_1_8:146220430-146220868:+|nuORF;ENST00000555036.1_1_14:75602424-75614456:-|nuORF;ENST00000555873.1_1_14:75601590-75605782:-|nuORF;ENST00000556969.5_1_14:75601590-75614465:-|nuORF	72.87924865735499	0.12833875048249987	1				NaN	NaN	0	NaN	7002	5147	12150
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12152	37.082	NaN	1079.5	30	0	167.87	0.033	+			23893	LDKATVLL	8	46	436.7763798712628	871.5382068093256	2	436.7760925292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LDKATVLL_	ENSG00000150593|ENST00000280154|PDCD4;ENST00000489049.5_1_10:112647518-112650449:+|nuORF;nc|ENSG00000150593|Q53EL6-2|PDCD4	64.20726635412375	0.4601301477144759	1				NaN	NaN	0	NaN	7003	5147	12150
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12163	37.116	NaN	3328.1	30	0	585.82	0.144			+	26364	LTCLTELIK	9	59	545.8121780062354	1089.6098030792707	2	545.813720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_LTC(Carbamidomethyl (C))LTELIK_	REV__ENSG00000158863|ENST00000289921|FHIP2B;REV__ENST00000488968.1_1_8:21953801-21954290:+|nuORF;REV__ENST00000498344.2_1_8:21946698-21954290:+|nuORF	74.25504064058377	0.12238981753128622	1				NaN	NaN	0	NaN	7008	5153	12162
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12175	37.154	NaN	1852.2	30	0	324.91	0.214			+	1747	AIAAVSGSFL	10	63	468.2634725842596	934.5123922353192	2	468.2635498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AIAAVSGSFL_	REV__ENST00000373504.10_1_X:72783056-72783248:+|nuORF	45.9519527083369	0.4943008177357963	1				NaN	NaN	0	NaN	7014	5159	12174
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12176	37.157	NaN	2719.7	30	0	572.62	0.035				-1	 	0	56	505.7609029615859	1009.5072529899718	2	505.7613830566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7015	5159	12174
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12182	37.173	NaN	2733.7	30	0	359.38	0.214	+			28431	NEVKIYSL	8	63	483.2684914656068	964.5224299980136	2	483.26898193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NEVKIYSL_	ENSG00000115761|ENST00000381685|NOL10;ENST00000473087.1_1_2:10822102-10830002:-|nuORF;nc|ENSG00000115761|Q9BSC4-2|NOL10;nc|ENSG00000115761|Q9BSC4-4|NOL10	51.52775601994872	0.5847804192265663	1				NaN	NaN	0	NaN	7018	5162	12181
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12183	37.177	NaN	1720.5	30	0	491.26	0.033	+			50518	YAPSGNFV	8	45	427.7056165778208	NaN	0	427.705810546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YAPSGNFV_	ENSG00000111664|ENST00000229264|GNB3;ENSG00000172354|ENST00000303210|GNB2;ENST00000470354.1_1_7:100275135-100275402:+|nuORF;nc|ENSG00000111664|P16520-2|GNB3;nc|ENSG00000172354|P62879-2|GNB2	53.351449002276354	1.7418937515398478	1				NaN	NaN	0	NaN	7019	5162	12181
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12190	37.193	NaN	3119.1	30	0	1532.5	0.214	+			20824	KIFYNSGPK	9	56	527.2899182498102	1052.5652835664202	2	527.2910766601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KIFYNSGPK_	ENSG00000083544|ENST00000377881|TDRD3;ENST00000471710.2_1_13:61103135-61109406:+|nuORF;nc|ENSG00000083544|Q9H7E2-2|TDRD3;nc|ENSG00000083544|Q9H7E2|TDRD3	40.77816245573522	0.41113185337114944	1				NaN	NaN	0	NaN	7023	5165	12189
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12191	37.197	NaN	1672.9	30	0	333.28	0.034	+			44613	TTDVNGKTL	9	49	474.7532969656542	947.4920409981085	2	474.75311279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTDVNGKTL_	ENSG00000140945|ENST00000567109|CDH13;nc|ENSG00000140945|P55290-4|CDH13;nc|ENSG00000140945|P55290-5|CDH13	34.172542307311794	0.4838870758800184	1				NaN	NaN	0	NaN	7024	5165	12189
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12200	37.227	NaN	812.2	30	0	104.09	0.14	+			23550	LAKVGIAL	8	39	392.7679647526521	783.5213765721043	2	392.7679138183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LAKVGIAL_	ENSG00000089154|ENST00000300648|GCN1	74.51659920185547	0.36926395944126233	1				NaN	NaN	0	NaN	7027	5171	12199
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12209	37.262	NaN	2141.3	30	0	235.85	0.144	+			35897	SEFKAMDSI	9	62	514.2414707737685	1026.4683886143368	2	514.2422485351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEFKAMDSI_	CTNNA1|p.L897I|1|0.68|ENSG00000044115|chr5:138934057-138934057|C/A|missense_variant;ENSG00000044115|ENST00000302763|CTNNA1;ENST00000522792.1_1_5:138268134-138269775:+|nuORF;nc|ENSG00000044115|P35221-2|CTNNA1;nc|ENSG00000044115|P35221-3|CTNNA1	72.87924865735499	0.12833875048249987	1				NaN	NaN	0	NaN	7030	5177	12208
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12213	37.279	NaN	1742.8	30	0	160.74	0.214	+			49267	VVQDGITLITK	11	62	593.8554495557393	1185.6963461782784	2	593.8560180664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVQDGITLITK_	ENSG00000079246|ENST00000392132|XRCC5	65.2775769800794	0.27634548443598095	1				NaN	NaN	0	NaN	7031	5180	12212
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12214	37.283	NaN	1271.8	30	0	64.703	0.106	+			36486	SEVVDVAKL	9	53	480.2737121582031	NaN	0	480.2737121582031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEVVDVAKL_	ENSG00000145555|ENST00000513610|MYO10;nc|ENSG00000145555|Q9HD67-3|MYO10	44.377184641726394	0.24544280798894275	1				NaN	NaN	0	NaN	7032	5180	12212
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12215	37.285	NaN	1824.7	30	0	212.32	0.106	+			37554	SLMHSFILK	9	67	538.3020067719403	1074.5894606106806	2	538.3031005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLMHSFILK_	ENSG00000125971|ENST00000357156|DYNLRB1;ENST00000480759.1_1_20:33117938-33128425:+|nuORF	58.22992032128504	0.22837015374068087	1				NaN	NaN	0	NaN	7033	5180	12212
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12216	37.286	NaN	1649.8	30	0	223.71	0.106			+	-1	ITIYPMPLK	9	55	546.3128662109375	NaN	0	546.3128662109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_ITIYPM(Oxidation (M))PLK_	REV__ENSG00000170848|ENST00000187910|PSG6;REV__ENST00000593983.5_1_19:43519347-43523525:-|nuORF;REV__ENST00000595138.1_1_19:43519232-43530599:-|nuORF;REV__ENST00000599753.1_2_19:43406566-43412082:-|nuORF;REV__nc|ENSG00000170848|Q00889|PSG6	35.61828744233558	0.29773779453147337	1				NaN	NaN	0	NaN	7034	5180	12212
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12217	37.288	NaN	922.83	30	0	76.845	0.034	+			29298	NYKTNIGK	8	45	469.2566833496094	NaN	0	469.2566833496094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NYKTNIGK_	tr|U7SVT4|U7SVT4_FUSNUMolybdatetransportsystemsubstrate-bindingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01334PE=4SV=1	35.61828744233558	1.7418937515398478	1				NaN	NaN	0	NaN	7035	5180	12212
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12232	37.338	NaN	1471.9	30	0	306.53	0.214	+			18206	IMTMLHPK	8	45	485.76400835057103	969.5134637679421	2	485.763916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IMTMLHPK_	ENST00000432460.1_3_2:219523811-219524039:-|nuORF	38.80614096846853	0.6637206697844082	1				NaN	NaN	0	NaN	7041	5189	12231
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12233	37.341	NaN	1133.8	30	0	389.74	0.033			+	26726	LVLIPRNA	8	39	448.28930076093485	NaN	0	448.28997802734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LVLIPRNA_	REV__CON__P41361	28.2542754592877	1.7418937515398478	1				NaN	NaN	0	NaN	7042	5189	12231
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12242	37.372	NaN	1433	30	0	275.38	0.142	+			25093	LLNLQAVIA	9	49	477.8031451653491	953.5917373974983	2	477.802490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LLNLQAVIA_	ENSG00000104880|ENST00000668164|ARHGEF18;nc|ENSG00000104880|Q6ZSZ5-1|ARHGEF18;nc|ENSG00000104880|Q6ZSZ5-2|ARHGEF18;nc|ENSG00000104880|Q6ZSZ5-5|ARHGEF18;nc|ENSG00000104880|Q6ZSZ5-6|ARHGEF18	45.9519527083369	0.35044536499095585	1				NaN	NaN	0	NaN	7045	5195	12241
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12253	37.408	NaN	2232.8	30	0	203.9	0.214				-1	TLWAWRWRQRC	11	67	540.2767303603102	1617.8083616811305	3	540.2767333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_TLWAWRWRQRC(Carbamidomethyl (C))_	ENST00000478401.1_1_9:100872512-100881310:-|nuORF	12.95748067046073	0.8098171233146934	1				NaN	NaN	0	NaN	7050	5201	12252
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12254	37.412	NaN	2731.9	30	0	1364.3	0.047			+	33605	RLQLANTLLAP	11	55	605.3692298117603	NaN	0	605.3681640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RLQLANTLLAP_	REV__ENST00000568025.1_1_6:166796808-166797144:+|nuORF	17.468008924990375	0.456735970842152	1				NaN	NaN	0	NaN	7051	5201	12252
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12271	37.468	NaN	1876.2	30	0	169.04	0.214			+	36451	SEVKLYSL	8	59	469.764595386335	NaN	0	469.7646789550781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEVKLYSL_	REV__ENST00000506130.5_1_5:72853376-72858450:-|nuORF	62.107414245175825	1.7418937515398478	1				NaN	NaN	0	NaN	7059	5210	12270
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12272	37.471	NaN	863.52	30	0	125.46	0.106			+	23574	LALLSTGVGL	10	40	472.29488417123866	942.5752154092773	2	472.2950134277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LALLSTGVGL_	REV__ENSG00000164050|ENST00000296440|PLXNB1;REV__ENST00000473996.1_1_3:48454981-48455344:-|nuORF;REV__ENST00000485535.5_1_3:48454981-48455414:-|nuORF;REV__nc|ENSG00000164050|O43157-2|PLXNB1	23.04248740728303	0.69165701907106	1				NaN	NaN	0	NaN	7060	5210	12270
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12273	37.473	NaN	1696.9	30	0	160.85	0.106	+			48993	VVGLIQDLY	9	52	510.29239886822586	1018.5702448032517	2	510.79412841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVGLIQDLY_	ENST00000380916.8_1_9:14618745-14618955:-|nuORF	53.351449002276354	0.2690372970092375	1				NaN	NaN	0	NaN	7061	5210	12270
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12274	37.475	NaN	1106.6	30	0	191.85	0.035			+	25179	LLYPNPGPR	9	50	513.7894287109375	NaN	0	513.7894287109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LLYPNPGPR_	REV__ENST00000405142.1_1_16:4744898-4745177:+|nuORF	40.77816245573522	0.2702456086868081	1				NaN	NaN	0	NaN	7062	5210	12270
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12282	37.506	NaN	1693.5	30	0	330.45	0.214	+			37378	SLFSNVVTK	9	50	497.78234346902315	993.5501340048463	2	497.7820739746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLFSNVVTK_	ATIC|p.E517Rfs*11|1|0.32|ENSG00000138363|chr2:215349139-215349151|GAGTTACTCACTG/-|frameshift_variant;ENSG00000138363|ENST00000236959|ATIC;ENST00000443953.5_1_2:216177073-216214375:+|nuORF;ENST00000446622.5_1_2:216199652-216212358:+|nuORF;ENST00000467388.1_1_2:216203501-216211697:+|nuORF;nc|ENSG00000138363|P31939-2|ATIC	42.86426827375447	0.38666266728046506	1				NaN	NaN	0	NaN	7064	5216	12281
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12283	37.509	NaN	986.24	30	0	144.24	0.106				-1	 	0	49	505.7609029615859	1009.5072529899718	2	505.76214599609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7065	5216	12281
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12284	37.511	NaN	973.28	30	0	206.96	0.033	+			41636	SVQSGNLAL	9	45	444.74283145382964	NaN	0	444.7431640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVQSGNLAL_	ENSG00000011304|ENST00000356948|PTBP1;ENST00000586944.5_1_19:797434-805231:+|nuORF;nc|ENSG00000011304|P26599-1|PTBP1;nc|ENSG00000011304|P26599-2|PTBP1	58.22992032128504	0.15686832049467786	1				NaN	NaN	0	NaN	7066	5216	12281
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12295	37.545	NaN	1794.9	30	0	211.46	0.142			+	7646	DKQFVLGK	8	50	467.7717200389614	933.5288871447228	2	467.77105712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DKQFVLGK_	REV__ENSG00000107960|ENST00000224950|STN1;REV__ENST00000466828.5_1_10:105642444-105658073:-|nuORF	52.936696900407355	0.5717071646657654	1				NaN	NaN	0	NaN	7071	5222	12294
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12300	37.562	NaN	2256.3	30	0	223.64	0.142	+			808	AEFVGVSHL	9	57	479.75381017136107	957.4930674095222	2	479.75347900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEFVGVSHL_	ENSG00000141101|ENST00000268802|NOB1;ENST00000502915.1_1_4:139481866-139482694:+|nuORF	56.72105179125745	0.24094814563026265	1				NaN	NaN	0	NaN	7073	5225	12299
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12304	37.579	NaN	1813.4	30	0	324.27	0.144	+			46084	VCVGERLART	10	58	552.3031957642665	1102.591838595333	2	552.3037719726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VCVGERLART_	ENSG00000073067|ENST00000308919|CYP2W1	29.170058357718403	0.6416167986984785	1				NaN	NaN	0	NaN	7074	5228	12303
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12308	37.596	NaN	1275.1	30	0	133.14	0.143	+			47393	VPLKGIVSY	9	56	488.2986145019531	NaN	0	488.2986145019531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VPLKGIVSY_	ENSG00000138078|ENST00000409411|PREPL;nc|ENSG00000138078|Q4J6C6-2|PREPL;nc|ENSG00000138078|Q4J6C6-3|PREPL;nc|ENSG00000138078|Q4J6C6|PREPL	41.42661286455405	0.26577678759562784	1				NaN	NaN	0	NaN	7075	5231	12307
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12319	37.644	NaN	1725.3	30	0	274.82	0.214			+	26056	LSLPSHTM	8	53	443.22846683836076	884.4423807435215	2	443.2285461425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSLPSHTM_	REV__ENST00000228799.6_1_12:2933460-2933670:+|nuORF	50.0245360154114	0.5941082100236891	1				NaN	NaN	0	NaN	7077	5240	12318
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12320	37.647	NaN	1315.1	30	0	147.02	0.034	+			51064	YLKQVLGQ	8	51	474.77948172528676	947.5444105173735	2	474.77960205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YLKQVLGQ_	ENSG00000159377|ENST00000290541|PSMB4;ENST00000476467.1_1_1:151372063-151372664:+|nuORF;ENST00000493673.1_1_1:151372075-151372920:+|nuORF;ENST00000495288.5_1_1:151372054-151373071:+|nuORF	31.954861631926434	0.7126016770032289	1				NaN	NaN	0	NaN	7078	5240	12318
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12324	37.662	NaN	2804.4	30	0	435.52	0.143	+			16266	HEGDIILKI	9	70	519.3031109873436	1036.5916690414872	2	519.3038330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HEGDIILKI_	ENSG00000119139|ENST00000377245|TJP2;nc|ENSG00000119139|Q9UDY2-2|TJP2;nc|ENSG00000119139|Q9UDY2-3|TJP2;nc|ENSG00000119139|Q9UDY2-4|TJP2;nc|ENSG00000119139|Q9UDY2-5|TJP2;nc|ENSG00000119139|Q9UDY2-6|TJP2;nc|ENSG00000119139|Q9UDY2-7|TJP2;TJP2|p.F813Sfs*12|1|0.23|ENSG00000119139|chr9:69240013-69240013|T/-|frameshift_variant;TJP2|p.P484Qfs*30|1|0.18|ENSG00000119139|chr9:69228107-69228107|C/-|frameshift_variant;TJP2|p.T849Rfs*12|1|0.32|ENSG00000119139|chr9:69240120-69240120|A/-|frameshift_variant	96.66504779109242	0.04607440320619715	1				NaN	NaN	0	NaN	7079	5243	12323
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12328	37.678	NaN	3368.8	30	0	567.77	0.214	+			44784	TTQLSLSFK	9	62	512.7870954083419	1023.5596378834838	2	512.78759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTQLSLSFK_	ENSG00000198786|ENST00000361567|MT-ND5	58.2462437865262	0.22823408064396822	1				NaN	NaN	0	NaN	7080	5246	12327
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12329	37.681	NaN	2609.3	30	0	465.25	0.034			+	37769	SLVSTLNII	9	56	480.29243828135947	958.570323629519	2	480.7937927246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLVSTLNII_	REV__ENSG00000076242|ENST00000231790|MLH1;REV__nc|ENSG00000076242|P40692-2|MLH1;REV__nc|ENSG00000076242|P40692-3|MLH1	74.25504064058377	0.12238981753128622	1				NaN	NaN	0	NaN	7081	5246	12327
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12335	37.698	NaN	4770.4	30	0	844	0.142	+			35071	SAFGVIIEK	9	57	482.2789711821615	962.543389431123	2	482.27972412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAFGVIIEK_	ENSG00000178440|ENST00000651763|TIMM23B-AGAP6;ENSG00000204152|ENST00000651259|TIMM23B;ENSG00000265354|ENST00000580018|TIMM23;nc|ENSG00000204152|Q5SRD1-2|TIMM23B	83.6470233535746	0.08277643980271215	1				NaN	NaN	0	NaN	7084	5249	12334
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12354	37.799	NaN	3362.9	30	0	484.64	0.142	+			7258	DALVITHY	8	55	466.24784903485164	930.4811451365033	2	466.24737548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DALVITHY_	ENSG00000109917|ENST00000227322|ZPR1	85.35947970620816	0.2915182781752196	1				NaN	NaN	0	NaN	7085	5267	12353
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12366	37.837	NaN	1435.5	30	0	268.88	0.142	+			47423	VPRGVQFL	8	49	458.27440986475887	914.5342667963178	2	458.2742614746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VPRGVQFL_	ENSG00000111859|ENST00000379446|NEDD9;nc|ENSG00000111859|Q14511-3|NEDD9	26.79610172149135	0.7524337208463756	1				NaN	NaN	0	NaN	7091	5273	12365
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12370	37.854	NaN	2573.1	30	0	401.09	0.143	+			47271	VMTGSYNNF	9	58	516.726448204108	1031.438343475016	2	516.7266845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VMTGSYNNF_	ABHD12-PPP2R2A|1|fusion;ENSG00000221914|ENST00000380737|PPP2R2A;ENST00000517754.1_1_8:26221160-26227926:+|nuORF;nc|ENSG00000221914|P63151-2|PPP2R2A	72.87924865735499	0.12833875048249987	1				NaN	NaN	0	NaN	7092	5276	12369
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12377	37.874	NaN	4129.8	30	0	788.42	0.144	+			243	AAMLDTVVFK	10	65	555.7968840675768	1109.5792152019535	2	555.7979125976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_AAM(Oxidation (M))LDTVVFK_	ENSG00000115233|ENST00000409682|PSMD14;ENST00000477232.5_1_2:162241962-162267908:+|nuORF;ENST00000492908.1_1_2:162265323-162267908:+|nuORF	115.49404669440601	0.03369372856552391	1				NaN	NaN	0	NaN	7096	5279	12376
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12382	37.89	NaN	1020.6	30	0	127.06	0.145	+			49804	VYSRYFTTY	9	54	600.2914886686732	NaN	0	600.2918090820312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	33.921630207806714	0.3063038642147651	1				NaN	NaN	0	NaN	7098	5282	12381
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12387	37.907	NaN	1366.4	30	0	52.929	0.142	+			8282	EAIGAVIHY	9	52	486.76112422755045	NaN	0	486.7615661621094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EAIGAVIHY_	ENSG00000020129|ENST00000373243|NCDN;nc|ENSG00000020129|Q9UBB6-2|NCDN	71.37791200682192	0.10092813839350395	1				NaN	NaN	0	NaN	7100	5285	12386
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12391	37.923	NaN	2690.5	30	0	492.64	0.155				-1	 	0	66	652.0257196738286	1953.0553296216856	3	652.0258178710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7101	5288	12390
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12396	37.94	NaN	1476.7	30	0	89.012	0.143	+			23142	KVWIAVLSD	9	55	515.8000291678461	1029.5855054024921	2	515.8013916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVWIAVLSD_	LRRC4C|p.R402W|1|0.34|ENSG00000148948|chr11:40115089-40115089|G/A|missense_variant	29.14955571784316	0.5308295550522326	1				NaN	NaN	0	NaN	7103	5291	12395
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12411	37.992	NaN	1358.3	30	0	147.88	0.142	+			220	AALSYVLCK	9	55	484.2668570006118	966.5191610680237	2	484.267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AALSYVLCK_	ENSG00000161921|ENST00000293778|CXCL16	49.44154591367651	0.3095138337212152	1				NaN	NaN	0	NaN	7109	5300	12410
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12423	38.042	NaN	1651	30	0	196.2	0.214	+			35205	SAKILPSLL	9	55	471.30502334996714	940.5954937667343	2	471.304931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAKILPSLL_	ENSG00000054654|ENST00000555002|SYNE2;ENST00000394768.6_2_14:64542710-64692241:+|nuORF;nc|ENSG00000054654|Q8WXH0-7|SYNE2;nc|ENSG00000054654|Q8WXH0|SYNE2;SYNE2|p.A5240Qfs*5|1|0.07|ENSG00000054654|chr14:64152639-64152639|G/-|frameshift_variant;SYNE2|p.F4992Lfs*13|1|0.39|ENSG00000054654|chr14:64140067-64140067|T/-|frameshift_variant;SYNE2|p.L5308Ifs*18|1|0.12|ENSG00000054654|chr14:64158750-64158751|GG/-|frameshift_variant;SYNE2|p.S6651Rfs*83|1|0.29|ENSG00000054654|chr14:64220596-64220597|-/G|frameshift_variant	35.15202426646627	0.4747332964206883	1				NaN	NaN	0	NaN	7112	5309	12422
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12424	38.045	NaN	1662.8	30	0	186.22	0.036	+			544	ADEKVIFGIE	10	58	560.7980191892045	1119.581485445209	2	560.7987670898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ADEKVIFGIE_	ENSG00000153993|ENST00000284136|SEMA3D	29.170058357718403	0.6416167986984785	1				NaN	NaN	0	NaN	7113	5309	12422
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12429	38.06	NaN	1524.7	30	0	516.4	0.143	+			25495	LPSETIQTY	9	47	526.2703466360958	NaN	0	526.2696533203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LPSETIQTY_	ENSG00000172086|ENST00000347055|KRCC1	25.57405402267927	0.3484490411150625	1				NaN	NaN	0	NaN	7115	5312	12428
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12434	38.076	NaN	2060.1	30	0	313.96	0.142	+			46651	VGDPSVHLL	9	55	468.7611632864248	935.5077736396496	2	468.7607116699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VGDPSVHLL_	ENSG00000099364|ENST00000338343|FBXL19;nc|ENSG00000099364|Q6PCT2-2|FBXL19;nc|ENSG00000099364|Q6PCT2-3|FBXL19;nc|ENSG00000099364|Q6PCT2|FBXL19	35.61828744233558	0.47037581924408073	1				NaN	NaN	0	NaN	7117	5315	12433
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12451	38.142	NaN	1379.7	30	0	218.75	0.143	+			27983	MVQIQFHQ	8	49	515.7618849989045	1029.509217064609	2	515.7615966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MVQIQFHQ_	sp|F5HE44|US12_HCMVMUncharacterizedproteinUS12OS=Humancytomegalovirus(strainMerlin)OX=295027GN=US12PE=3SV=1;sp|P09721|US12_HCMVAUncharacterizedproteinHVLF6OS=Humancytomegalovirus(strainAD169)OX=10360GN=US12PE=3SV=1	71.37791200682192	0.3954169775488141	1				NaN	NaN	0	NaN	7122	5327	12450
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12457	38.16	NaN	2064.9	30	0	429.17	0.143	+			8037	DTVEKLYK	8	53	498.27419587319105	994.5338388131821	2	498.27435302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DTVEKLYK_	tr|U7SJG6|U7SJG6_FUSNURCKC-terminaldomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02133PE=4SV=1	47.91560031466742	0.6071945918984287	1				NaN	NaN	0	NaN	7125	5330	12456
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12462	38.176	NaN	1942.8	30	0	252.59	0.142	+			3217	ASLADIMAK	9	56	460.24922045810695	918.4838879830139	2	460.2495422363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASLADIMAK_	ENSG00000114391|ENST00000394077|RPL24;ENST00000446071.1_1_9:72832122-72832404:+|nuORF	90.60085204095205	0.06317133949006545	1				NaN	NaN	0	NaN	7127	5333	12461
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12466	38.193	NaN	1892.6	30	0	345.37	0.142	+			40835	SVELPIVGK	9	51	471.286949471736	940.5593460102721	2	471.28668212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVELPIVGK_	ENSG00000240849|ENST00000371652|PEDS1;ENST00000453505.6_1_20:48741597-48767785:-|nuORF	56.72105179125745	0.24094814563026265	1				NaN	NaN	0	NaN	7128	5336	12465
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12471	38.21	NaN	2357.1	30	0	455.01	0.214	+			19073	IYIAGHPAF	9	54	494.7659208800935	987.517288826987	2	494.766357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IYIAGHPAF_	ENSG00000104824|ENST00000221419|HNRNPL;ENST00000568980.1_1_15:34781792-34782686:-|nuORF;HNRNPL|p.P337Hfs*58|9|0.35|ENSG00000104824|chr19:38840319-38840319|G/-|frameshift_variant;HNRNPL|p.P338Tfs*56|1|0.23|ENSG00000104824|chr19:38840318-38840319|-/G|frameshift_variant;nc|ENSG00000104824|P14866-2|HNRNPL	85.90917672979207	0.07639869513036507	1				NaN	NaN	0	NaN	7130	5339	12470
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12472	38.213	NaN	1469.5	30	0	281.96	0.106	+			17500	IDFTGHAL	8	44	437.22692919660625	872.4393054600125	2	437.22711181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IDFTGHAL_	ENSG00000057608|ENST00000380191|GDI2;ENSG00000203879|ENST00000447750|GDI1;ENST00000491154.1_1_X:153666748-153668487:+|nuORF;GDI2|p.S222Afs*20|1|0.1|ENSG00000057608|chr10:5785197-5785197|T/-|frameshift_variant;nc|ENSG00000057608|P50395-2|GDI2	47.91560031466742	0.6071945918984287	1				NaN	NaN	0	NaN	7131	5339	12470
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12473	38.215	NaN	812.58	30	0	89.104	0.035	+			12239	GASLADIMAK	10	45	488.7603105280307	975.5060681228614	2	488.7604064941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GASLADIMAK_	ENSG00000114391|ENST00000394077|RPL24;ENST00000446071.1_1_9:72832122-72832404:+|nuORF	56.43379154798735	0.3982744522255666	1				NaN	NaN	0	NaN	7132	5339	12470
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12478	38.229	NaN	2106.2	30	0	852.47	0.155				-1	 	0	53	610.9782119290896	1829.9128063874687	3	610.9796752929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7134	5342	12477
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12483	38.246	NaN	1261.5	30	0	377.35	0.142	+			44470	TSQLYTVK	8	42	470.2608192130727	NaN	0	470.2607116699219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSQLYTVK_	ENSG00000143815|ENST00000272163|LBR	32.81241826257853	1.7418937515398478	1				NaN	NaN	0	NaN	7136	5345	12482
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12492	38.278	NaN	1252.5	30	0	277.61	0.142			+	24649	LGTLLIAHD	9	47	476.7768631164425	NaN	0	476.77642822265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LGTLLIAHD_	REV__ADAMTS16|p.G799Wfs*25|1|0.22|ENSG00000145536|chr5:5239795-5239796|-/T|frameshift_variant;REV__ENSG00000145536|ENST00000274181|ADAMTS16;REV__nc|ENSG00000145536|Q8TE57-2|ADAMTS16	44.116797842482775	0.2472372736944149	1				NaN	NaN	0	NaN	7139	5351	12491
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12498	38.296	NaN	1327.1	30	0	126.3	0.215			+	37912	SPDAGHALLL	10	59	497.2729441782164	NaN	0	497.2727966308594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SPDAGHALLL_	REV__ENSG00000148331|ENST00000277458|ASB6;REV__ENSG00000272031|ENST00000606888|ANKRD34A	53.351449002276354	0.2844141321977336	1				NaN	NaN	0	NaN	7142	5354	12497
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12499	38.3	NaN	1489.8	30	0	120.79	0.106	+			14272	GSVELPIVGK	10	53	499.797944828755	997.5813367243101	2	499.7976989746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSVELPIVGK_	ENSG00000240849|ENST00000371652|PEDS1;ENST00000453505.6_1_20:48741597-48767785:-|nuORF	69.6276240434122	0.2803623802747859	1				NaN	NaN	0	NaN	7143	5354	12497
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12500	38.302	NaN	840.49	30	0	55.35	0.035	+			33226	RFSQDLPR	8	51	509.7754211425781	NaN	0	509.7754211425781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RFSQDLPR_	ENSG00000161010|ENST00000292586|MRNIP;ENST00000520150.5_1_5:179267832-179285817:-|nuORF;ENST00000521675.1_1_5:179268839-179271187:-|nuORF;nc|ENSG00000161010|Q6NTE8-2|MRNIP;nc|ENSG00000161010|Q6NTE8-3|MRNIP	21.9598887501803	1.7418937515398478	1				NaN	NaN	0	NaN	7144	5354	12497
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12515	38.351	NaN	1719.4	30	0	633.34	0.145			+	11561	FPLLNYPRSD	10	48	611.3140869140625	NaN	0	611.3140869140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FPLLNYPRSD_	REV__LTB4R2|p.G378Vfs*47|1|0.14|ENSG00000213906|chr14:24311699-24311699|G/-|frameshift_variant	14.137123925751023	0.4201028297492154	1				NaN	NaN	0	NaN	7150	5363	12514
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12522	38.383	NaN	1041.5	30	0	352.83	0.142	+			12497	GEEGYKPF	8	41	463.71652304304246	925.4184931528849	2	463.7170104980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEEGYKPF_	ENSG00000077238|ENST00000395762|IL4R;IL4R|p.E684Kfs*3|1|0.54|ENSG00000077238|chr16:27363398-27363398|G/-|frameshift_variant;nc|ENSG00000077238|P24394-3|IL4R	31.954861631926434	0.7126016770032289	1				NaN	NaN	0	NaN	7151	5369	12521
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12530	38.416	NaN	2488.6	30	0	297.48	0.214	+			12571	GEGRVGIIL	9	51	457.27708247030694	912.5396120074139	2	457.2768249511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEGRVGIIL_	CFTR|p.G1208Afs*3|1|0.3|ENSG00000001626|chr7:117627672-117627672|G/-|frameshift_variant;CFTR|p.L1258Ffs*7|1|0.26|ENSG00000001626|chr7:117642487-117642488|-/T|frameshift_variant;CFTR|p.S1297Lfs*31|1|0.28|ENSG00000001626|chr7:117652852-117652852|T/-|frameshift_variant;ENSG00000001626|ENST00000003084|CFTR;nc|ENSG00000001626|P13569-2|CFTR	44.377184641726394	0.36891676396732553	1				NaN	NaN	0	NaN	7153	5375	12529
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12531	38.419	NaN	2572.5	30	0	744.25	0.038			+	-1	MIRGMVRLAE	10	51	596.3211790611782	1190.6278051891563	2	596.8233032226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_MIRGM(Oxidation (M))VRLAE_	REV__ENSG00000123612|ENST00000243349|ACVR1C;REV__nc|ENSG00000123612|Q8NER5-2|ACVR1C;REV__nc|ENSG00000123612|Q8NER5-3|ACVR1C;REV__nc|ENSG00000123612|Q8NER5-4|ACVR1C	25.57405402267927	0.6709832231498071	1				NaN	NaN	0	NaN	7154	5375	12529
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12556	38.507	NaN	1139.1	30	0	182.7	0.143	+			28953	NSDPNLHLL	9	56	511.7672873344679	1021.5200217357358	2	511.76885986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NSDPNLHLL_	ENSG00000136830|ENST00000373312|NIBAN2;nc|ENSG00000136830|Q96TA1-2|NIBAN2	40.77816245573522	0.41113185337114944	1				NaN	NaN	0	NaN	7164	5390	12555
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12565	38.541	NaN	2726	30	0	796.44	0.214	+			40836	SVELPIVGK	9	51	471.286949471736	940.5593460102721	2	471.28692626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVELPIVGK_	ENSG00000240849|ENST00000371652|PEDS1;ENST00000453505.6_1_20:48741597-48767785:-|nuORF	82.24051045832904	0.08786059719216216	1				NaN	NaN	0	NaN	7167	5396	12564
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12566	38.545	NaN	1306.8	30	0	168.95	0.036			+	11928	FVFKYDASP	9	49	537.268938385192	1072.5233238371839	2	537.2698364257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FVFKYDASP_	REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-10|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-13|TTN;REV__nc|ENSG00000155657|Q8WZ42-2|TTN;REV__nc|ENSG00000155657|Q8WZ42-3|TTN;REV__nc|ENSG00000155657|Q8WZ42-5|TTN;REV__nc|ENSG00000155657|Q8WZ42-8|TTN;REV__nc|ENSG00000155657|Q8WZ42-9|TTN;REV__nc|ENSG00000155657|Q8WZ42|TTN;REV__TTN|p.A12650Gfs*4|1|0.4|ENSG00000155657|chr2:178633489-178633490|-/T|frameshift_variant;REV__TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;REV__TTN|p.A7105Cfs*8|1|0.32|ENSG00000155657|chr2:178722523-178722524|-/A|frameshift_variant;REV__TTN|p.D20259Rfs*40|1|0.44|ENSG00000155657|chr2:178583105-178583106|-/T|frameshift_variant;REV__TTN|p.D21555Ifs*6|1|0.33|ENSG00000155657|chr2:178576659-178576659|G/-|frameshift_variant;REV__TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;REV__TTN|p.D9026Afs*9|1|0.26|ENSG00000155657|chr2:178711205-178711208|CTGT/-|frameshift_variant;REV__TTN|p.E15132Sfs*22|1|0.27|ENSG00000155657|chr2:178612094-178612094|C/-|frameshift_variant;REV__TTN|p.E20392Dfs*6|1|0.04|ENSG00000155657|chr2:178582357-178582358|-/TTTAAAATTA|frameshift_variant;REV__TTN|p.E20392Kfs*4|1|0.02|ENSG00000155657|chr2:178582359-178582360|-/TTTT|frameshift_variant;REV__TTN|p.E9224Gfs*8|1|0.04|ENSG00000155657|chr2:178709697-178709698|-/TCTTATGATATCTTGAC|frameshift_variant;REV__TTN|p.F18705Lfs*8|1|0.37|ENSG00000155657|chr2:178590687-178590687|A/-|frameshift_variant;REV__TTN|p.G12742Vfs*2|1|0.05|ENSG00000155657|chr2:178632983-178632983|C/-|frameshift_variant;REV__TTN|p.G14712Dfs*11|1|0.37|ENSG00000155657|chr2:178614341-178614341|G/-|frameshift_variant;REV__TTN|p.G19920Afs*12|1|0.42|ENSG00000155657|chr2:178584961-178584961|G/-|frameshift_variant;REV__TTN|p.G22029Efs*22|2|0.13|ENSG00000155657|chr2:178575125-178575125|T/-|frameshift_variant;REV__TTN|p.I10495Nfs*4|1|0.37|ENSG00000155657|chr2:178685288-178685289|-/T|frameshift_variant;REV__TTN|p.I24998Nfs*2|1|0.35|ENSG00000155657|chr2:178566216-178566217|-/T|frameshift_variant;REV__TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;REV__TTN|p.I3592Lfs*36|1|0.25|ENSG00000155657|chr2:178741508-178741508|T/-|frameshift_variant;REV__TTN|p.I9225Cfs*34|1|0.06|ENSG00000155657|chr2:178709695-178709696|-/ATATCCATGAGCA|frameshift_variant;REV__TTN|p.K10923Rfs*104|2|0.23|ENSG00000155657|chr2:178679362-178679362|T/-|frameshift_variant;REV__TTN|p.K11381Nfs*25|1|0.07|ENSG00000155657|chr2:178671133-178671133|T/-|frameshift_variant;REV__TTN|p.K11556Sfs*15|1|0.39|ENSG00000155657|chr2:178652287-178652287|T/-|frameshift_variant;REV__TTN|p.K14271Qfs*5|1|0.02|ENSG00000155657|chr2:178617351-178617352|-/G|frameshift_variant;REV__TTN|p.K26626Nfs*34|1|0.34|ENSG00000155657|chr2:178561331-178561331|T/-|frameshift_variant;REV__TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;REV__TTN|p.K4988Ifs*4|1|0.06|ENSG00000155657|chr2:178733381-178733382|-/GAAAATGATG|frameshift_variant;REV__TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;REV__TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant;REV__TTN|p.L7142*|1|0.06|ENSG00000155657|chr2:178722407-178722411|TCTTA/-|frameshift_variant;REV__TTN|p.M4154Nfs*4|1|0.21|ENSG00000155657|chr2:178739821-178739822|-/T|frameshift_variant;REV__TTN|p.N13487Tfs*49|1|0.34|ENSG00000155657|chr2:178621335-178621335|T/-|frameshift_variant;REV__TTN|p.N15496Ifs*16|1|0.09|ENSG00000155657|chr2:178610116-178610116|T/-|frameshift_variant;REV__TTN|p.N6458Mfs*74|1|0.44|ENSG00000155657|chr2:178725998-178725998|T/-|frameshift_variant;REV__TTN|p.N7648Tfs*27|1|0.32|ENSG00000155657|chr2:178719598-178719598|T/-|frameshift_variant;REV__TTN|p.N8964Tfs*27|1|0.11|ENSG00000155657|chr2:178711988-178711988|T/-|frameshift_variant;REV__TTN|p.P16126Rfs*3|1|0.25|ENSG00000155657|chr2:178607301-178607302|TG/-|frameshift_variant;REV__TTN|p.P22810Hfs*10|1|0.03|ENSG00000155657|chr2:178572780-178572781|-/AAAT|frameshift_variant;REV__TTN|p.P4036Qfs*14|1|0.19|ENSG00000155657|chr2:178740175-178740175|G/-|frameshift_variant;REV__TTN|p.S5235Hfs*25|1|0.06|ENSG00000155657|chr2:178732315-178732316|-/ATATATG|frameshift_variant;REV__TTN|p.T4116Sfs*25|1|0.04|ENSG00000155657|chr2:178739937-178739938|-/CTATTATATATGAGGAA|frameshift_variant;REV__TTN|p.V10632Yfs*16|1|0.16|ENSG00000155657|chr2:178683254-178683254|T/-|frameshift_variant;REV__TTN|p.V11008Sfs*13|1|0.33|ENSG00000155657|chr2:178678146-178678147|-/T|frameshift_variant;REV__TTN|p.V11345Ffs*4|1|0.4|ENSG00000155657|chr2:178672044-178672044|T/-|frameshift_variant;REV__TTN|p.V13823*|1|0.28|ENSG00000155657|chr2:178620027-178620027|C/-|frameshift_variant;REV__TTN|p.V22573Cfs*4|2|0.31|ENSG00000155657|chr2:178573492-178573492|C/-|frameshift_variant;REV__TTN|p.V27442Cfs*4|1|0.05|ENSG00000155657|chr2:178558107-178558108|-/A|frameshift_variant;REV__TTN|p.W5728Mfs*3|1|0.07|ENSG00000155657|chr2:178730267-178730268|-/T|frameshift_variant	35.61828744233558	0.47037581924408073	1				NaN	NaN	0	NaN	7168	5396	12564
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12571	38.559	NaN	806.93	30	0	62.151	0.214	+			9662	ELSRIVLM	8	45	480.7806212114671	NaN	0	480.7806091308594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ELSRIVLM_	ENSG00000197562|ENST00000248139|RAB40C;ENST00000561781.1_1_16:675886-677619:+|nuORF;nc|ENSG00000197562|Q96S21-2|RAB40C;RAB40C|p.Q271Pfs*7|1|0.48|ENSG00000197562|chr16:627579-627580|-/C|frameshift_variant	33.51558372728122	1.7418937515398478	1				NaN	NaN	0	NaN	7170	5399	12570
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12572	38.563	NaN	1770.2	30	0	319.65	0.036				-1	VMLALASHLS	10	58	550.2936445989196	NaN	0	550.2932739257812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))VM(Oxidation (M))LALASHLS_	ENSG00000137171|ENST00000347162|KLC4;ENST00000467906.5_1_6:43030654-43039600:+|nuORF;nc|ENSG00000137171|Q9NSK0-3|KLC4;nc|ENSG00000137171|Q9NSK0-4|KLC4	35.61828744233558	0.3832230071539346	1				NaN	NaN	0	NaN	7171	5399	12570
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12577	38.577	NaN	1674.6	30	0	262.36	0.143			+	25425	LPLYNKTY	8	56	506.27963865100725	NaN	0	506.2799072265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LPLYNKTY_	REV__ENSG00000091009|ENST00000265271|RBM27;REV__RBM27|p.K816Tfs*63|2|0.2|ENSG00000091009|chr5:146267757-146267758|AA/-|frameshift_variant;REV__RBM27|p.Q122Rfs*55|1|0.24|ENSG00000091009|chr5:146229003-146229003|C/-|frameshift_variant;REV__RBM27|p.R138Efs*39|1|0.53|ENSG00000091009|chr5:146229727-146229727|A/-|frameshift_variant	44.116797842482775	1.7418937515398478	1				NaN	NaN	0	NaN	7173	5402	12576
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12594	38.642	NaN	1513.8	30	0	374.69	0.214	+			3092	ASGGIFVLK	9	42	446.268675606278	890.522798279356	2	446.2687072753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASGGIFVLK_	ENSG00000030066|ENST00000378460|NUP160;ENST00000526870.1_3_11:47861380-47861614:-|nuORF;nc|ENSG00000030066|Q12769|NUP160	62.107414245175825	0.1960472003779324	1				NaN	NaN	0	NaN	7178	5414	12593
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12595	38.646	NaN	1588	30	0	492.97	0.033	+			44915	TVAGLALIK	9	43	443.29216287392603	884.5697728146521	2	443.2923889160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVAGLALIK_	ENSG00000105835|ENST00000222553|NAMPT;ENST00000467730.1_1_7:105908908-105909650:-|nuORF;ENST00000491027.5_1_7:105903822-105925330:-|nuORF	49.44154591367651	0.3095138337212152	1				NaN	NaN	0	NaN	7179	5414	12593
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12604	38.676	NaN	2056.2	30	0	376.86	0.214				-1	 	0	50	491.2849051558734	980.5552573785468	2	491.28466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7182	5420	12603
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12605	38.68	NaN	1163.3	30	0	513.92	0.034			+	23935	LDPYAAKIA	9	37	481.271580453896	960.528607974592	2	481.2716369628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LDPYAAKIA_	REV__ENSG00000113643|ENST00000231572|RARS1;REV__ENST00000521939.5_1_5:167913503-167921691:+|nuORF;REV__ENST00000524082.5_1_5:167913503-167919924:+|nuORF;REV__nc|ENSG00000113643|P54136-2|RARS1	31.954861631926434	0.5046124803899898	1				NaN	NaN	0	NaN	7183	5420	12603
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12609	38.694	NaN	1653.6	30	0	169.77	0.214			+	11915	FVAGFSGVVLA	11	56	533.8014419470456	NaN	0	533.80078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FVAGFSGVVLA_	REV__nc|ENSG00000051128|Q9NSC5-3|HOMER3	35.61828744233558	0.4066803947888518	1				NaN	NaN	0	NaN	7184	5423	12608
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12610	38.698	NaN	1184.7	30	0	78.797	0.106	+			2169	ALLVGTCTEM	10	54	519.252425309307	1036.490297685414	2	519.2545776367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ALLVGTCTEM_	ENSG00000170927|ENST00000371117|PKHD1;nc|ENSG00000170927|P08F94-2|PKHD1;PKHD1|p.H2893Pfs*2|1|0.4|ENSG00000170927|chr6:51754903-51754904|-/G|frameshift_variant	71.29570347882199	0.26673431503403816	1				NaN	NaN	0	NaN	7185	5423	12608
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12611	38.7	NaN	915.81	30	0	83.578	0.035			+	9140	EGLRLRMK	8	55	501.79586130382364	1001.5771696744473	2	501.7964782714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EGLRLRMK_	REV__ENST00000230895.10_2_5:10680754-10680856:-|nuORF	30.503639358989545	0.7238069182250283	1				NaN	NaN	0	NaN	7186	5423	12608
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12635	38.786	NaN	2535.8	30	0	290.11	0.144			+	37531	SLLQVCLQY	9	68	533.783895328606	1065.553237724012	2	534.2861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLLQVCLQY_	REV__ENSG00000132879|ENST00000251547|FBXO44	49.44154591367651	0.3095138337212152	1				NaN	NaN	0	NaN	7195	5438	12634
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12640	38.802	NaN	1482.4	30	0	223.44	0.143	+			44947	TVATFILQK	9	51	510.8082545088808	1019.6019560845616	2	510.8085632324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVATFILQK_	ENSG00000144580|ENST00000273064|CNOT9;nc|ENSG00000144580|Q92600-2|CNOT9;nc|ENSG00000144580|Q92600-3|CNOT9	51.19269402634007	0.2889735674168909	1				NaN	NaN	0	NaN	7197	5441	12639
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12655	38.866	NaN	1893.1	30	0	243.84	0.214	+			17790	IETTGTYQL	9	61	513.2615375378085	NaN	0	513.2617797851562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IETTGTYQL_	ENSG00000007171|ENST00000313735|NOS2;nc|ENSG00000007171|P35228-2|NOS2;NOS2|p.A650Pfs*53|1|0.21|ENSG00000007171|chr17:27769063-27769063|C/-|frameshift_variant;NOS2|p.Y709*|1|0.33|ENSG00000007171|chr17:27767745-27767745|G/-|frameshift_variant	67.49366992349736	0.1173583512313808	1				NaN	NaN	0	NaN	7200	5453	12654
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12656	38.87	NaN	2955.9	30	0	441.33	0.034	+			10863	FAVAPNQNL	9	53	487.25881952464175	972.5030861160835	2	487.2590026855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FAVAPNQNL_	COL6A2|p.P584Lfs*12|1|0.46|ENSG00000142173|chr21:46124896-46124896|C/-|frameshift_variant;ENSG00000142173|ENST00000300527|COL6A2;nc|ENSG00000142173|P12110-2|COL6A2;nc|ENSG00000142173|P12110-3|COL6A2	85.35947970620816	0.07794846947388434	1				NaN	NaN	0	NaN	7201	5453	12654
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12660	38.885	NaN	1412.3	30	0	275.67	0.214	+			41941	SVVSIVIGK	9	47	451.28976456973373	900.5649762062675	2	451.2895202636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVVSIVIGK_	nc|ENSG00000136144|Q8NDN9-2|RCBTB1	39.252832667884924	0.4290233611298554	1				NaN	NaN	0	NaN	7202	5456	12659
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12661	38.888	NaN	1162.7	30	0	145.87	0.106			+	5154	ATSVLNVL	8	45	408.7447934579253	815.4750339826506	2	408.74530029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATSVLNVL_	REV__ENSG00000176463|ENST00000318445|SLCO3A1;REV__ENST00000553653.5_1_15:92397138-92694297:+|nuORF;REV__ENST00000555549.5_1_15:92641439-92706362:+|nuORF;REV__nc|ENSG00000176463|Q9UIG8-2|SLCO3A1;REV__nc|ENSG00000176463|Q9UIG8-3|SLCO3A1;REV__nc|ENSG00000176463|Q9UIG8-4|SLCO3A1;REV__SLCO3A1-ATPBD4|1|fusion;REV__SLCO3A1-ATPBD4|2|fusion;REV__SLCO3A1|p.A424V|1|0.04|ENSG00000176463|chr15:92126157-92126157|C/T|missense_variant	101.21157088398209	0.2500103534009131	1				NaN	NaN	0	NaN	7203	5456	12659
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12662	38.89	NaN	1000.6	30	0	247.19	0.035	+			25334	LPDTLKVTY	9	51	525.2982093880224	NaN	0	525.2976684570312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LPDTLKVTY_	ENSG00000160255|ENST00000652462|ITGB2;ENST00000475170.5_1_21:46306285-46313576:-|nuORF;ENST00000498666.5_1_21:46313282-46313576:-|nuORF	34.172542307311794	0.30503706118289736	1				NaN	NaN	0	NaN	7204	5456	12659
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12668	38.906	NaN	5332.8	30	0	1039.1	0.214	+			39508	STFNVFVGK	9	65	499.7687502250772	997.5229475169544	2	499.76904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STFNVFVGK_	ENSG00000122642|ENST00000242209|FKBP9;ENST00000494374.5_1_7:32997059-33028356:+|nuORF;FKBP9|p.N129Ifs*10|7|0.31|ENSG00000122642|chr7:32975192-32975192|C/-|frameshift_variant;FKBP9|p.P380Lfs*6|1|0.38|ENSG00000122642|chr7:32996258-32996258|C/-|frameshift_variant;nc|ENSG00000122642|O95302-3|FKBP9	117.81106730687013	0.02252488733980868	1				NaN	NaN	0	NaN	7207	5459	12667
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12669	38.91	NaN	1359	30	0	169.54	0.036	+			30443	PYPSPGPYPV	10	57	537.269740760029	NaN	0	537.269287109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PYPSPGPYPV_	ENST00000604292.1_1_6:101337865-101338153:+|nuORF	38.80614096846853	0.372755673314885	1				NaN	NaN	0	NaN	7208	5459	12667
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12683	38.973	NaN	1132	30	0	127.77	0.143	+			18523	ISKYLDALN	9	60	518.7879960505	NaN	0	518.788330078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ISKYLDALN_	ENSG00000166398|ENST00000299505|GARRE1	47.95952297671804	0.22075498469600283	1				NaN	NaN	0	NaN	7210	5471	12682
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12692	39.005	NaN	1935.9	30	0	206.48	0.143				-1	VTCMRKVGK	9	56	519.2848128954621	1036.555072857724	2	519.2862548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_VTCM(Oxidation (M))RKVGK_	ENSG00000075914|ENST00000265564|EXOSC7;ENST00000461361.5_1_3:45016905-45052828:+|nuORF	60.11826168202944	0.21262886028301267	1				NaN	NaN	0	NaN	7213	5477	12691
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12703	39.042	NaN	20987	30	0	5176.4	0.214	+			37134	SITSVFITK	9	64	498.2919849495894	994.5694169659788	2	498.2919616699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SITSVFITK_	ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;TRRAP-ASNS|1|fusion;TRRAP-ASNS|2|fusion;TRRAP|p.K3443Sfs*19|1|0.28|ENSG00000196367|chr7:99004246-99004246|A/-|frameshift_variant	163.1509380574825	0.003936019289634439	1				NaN	NaN	0	NaN	7218	5483	12702
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12704	39.045	NaN	896.76	30	0	111.28	0.034				-1	GSEHGFCF	8	46	470.6843032648949	939.3540535965898	2	470.6849060058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GSEHGFC(Carbamidomethyl (C))F_	nc|ENSG00000226124|E5RQL4|FTCDNL1	29.841539824830324	0.7289191502596711	1				NaN	NaN	0	NaN	7219	5483	12702
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12708	39.06	NaN	1147.5	30	0	185.05	0.143	+			37660	SLQVGPDSAI	10	44	493.7613332641593	985.5081135951186	2	493.760498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLQVGPDSAI_	CDH19|p.P710Rfs*20|1|0.25|ENSG00000071991|chr18:66505004-66505004|A/-|frameshift_variant;ENSG00000071991|ENST00000262150|CDH19	25.57405402267927	0.6709832231498071	1				NaN	NaN	0	NaN	7220	5486	12707
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12713	39.077	NaN	1004.8	30	0	109.52	0.143				-1	LKSVFLSAA	9	45	489.2867594246442	976.5589659160884	2	489.2867126464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LKSVFLSAA_	ENST00000523401.5_1_8:67702988-67703051:+|nuORF	34.172542307311794	0.4838870758800184	1				NaN	NaN	0	NaN	7222	5489	12712
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12733	39.158	NaN	2121.8	30	0	436.17	0.143	+			40868	SVFGTMPLK	9	53	490.26782090034044	978.5210888674809	2	490.76959228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVFGTMPLK_	ENSG00000151348|ENST00000533608|EXT2;nc|ENSG00000151348|Q93063-2|EXT2;nc|ENSG00000151348|Q93063-3|EXT2	31.529811441608018	0.5085848003137583	1				NaN	NaN	0	NaN	7227	5504	12732
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12738	39.175	NaN	1034.5	30	0	95.627	0.144				-1	FVSIYGLTC	9	51	530.2617652092938	NaN	0	530.2616577148438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_FVSIYGLTC(Carbamidomethyl (C))_	ENSG00000171488|ENST00000370454|LRRC8C;LRRC8C|p.W509Lfs*20|1|0.33|ENSG00000171488|chr1:89714087-89714088|-/C|frameshift_variant	33.51558372728122	0.30835390848773375	1				NaN	NaN	0	NaN	7229	5507	12737
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12742	39.192	NaN	497.99	30	0	36.459	0.214	+			6747	CDIPEAQPL	9	36	493.2353024520618	984.4560519709236	2	493.2346496582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CDIPEAQPL_	ENST00000394957.7_1_10:73510788-73511004:-|nuORF	24.519189625965996	0.574102787014149	1				NaN	NaN	0	NaN	7230	5510	12741
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12743	39.195	NaN	604.2	30	0	61.665	0.034			+	24845	LKALSVTPV	9	37	464.2973327636719	NaN	0	464.2973327636719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LKALSVTPV_	REV__COL2A1|p.Q479Rfs*150|1|0.18|ENSG00000139219|chr12:47986428-47986428|G/-|frameshift_variant	16.473147378115264	0.38122769658151995	1				NaN	NaN	0	NaN	7231	5510	12741
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12761	39.262	NaN	1686.8	30	0	275.68	0.143	+			5833	AVIGPDVFAK	10	53	508.7925616085553	1015.5705702839106	2	508.7928771972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVIGPDVFAK_	ENSG00000261150|ENST00000615648|EPPK1;EPPK1|p.G2015Vfs*36|2|0.33|ENSG00000261150|chr8:143867210-143867210|C/-|frameshift_variant;EPPK1|p.Q829Rfs*8|1|0.05|ENSG00000261150|chr8:143870770-143870770|C/-|frameshift_variant;EPPK1|p.Y695Ifs*68|1|0.36|ENSG00000261150|chr8:143871171-143871172|-/T|frameshift_variant	32.81241826257853	0.6118718159329168	1				NaN	NaN	0	NaN	7237	5522	12760
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12774	39.313	NaN	650.66	30	0	91.531	0.214	+			15630	GVLEKQTAI	9	38	479.7821960449219	NaN	0	479.7821960449219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVLEKQTAI_	SLITRK2|p.E834G|1|0.06|ENSG00000185985|chrX:145824926-145824926|A/G|missense_variant	37.15910966729921	0.2899585034171616	1				NaN	NaN	0	NaN	7241	5531	12773
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12775	39.317	NaN	1109.8	30	0	112.43	0.034	+			24647	LGTGSWLPT	9	47	466.24828024374887	NaN	0	466.2482604980469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LGTGSWLPT_	ENST00000439587.6_1_9:35835156-35841170:+|nuORF	44.116797842482775	0.2472372736944149	1				NaN	NaN	0	NaN	7242	5531	12773
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12785	39.349	NaN	1086.7	30	0	123.17	0.142				-1	MTVVPLLL	8	42	464.2844705599641	NaN	0	464.2840576171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))MTVVPLLL_	SDF2|p.A2T|1|0.38|ENSG00000132581|chr17:28661873-28661873|C/T|missense_variant	29.841539824830324	1.7418937515398478	1				NaN	NaN	0	NaN	7246	5537	12784
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12818	39.481	NaN	2009.6	30	0	706.7	0.214	+			29108	NTQDVLIFK	9	50	539.301032664967	1076.587512396734	2	539.3026123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NTQDVLIFK_	ENSG00000156958|ENST00000560031|GALK2;nc|ENSG00000156958|Q01415-2|GALK2	54.722347961057174	0.257609425301511	1				NaN	NaN	0	NaN	7255	5561	12817
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12819	39.485	NaN	1159.2	30	0	103.82	0.034	+			42722	TDGKVFQF	8	45	471.24026082379635	940.4659687143927	2	471.24017333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TDGKVFQF_	ENSG00000114391|ENST00000394077|RPL24	79.9392285194092	0.32408006123154964	1				NaN	NaN	0	NaN	7256	5561	12817
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12836	39.549	NaN	1744.6	30	0	324.88	0.144	+			30611	QARIEIESF	9	53	546.7879210311456	1091.5612891290912	2	546.7886962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QARIEIESF_	ENSG00000044574|ENST00000324460|HSPA5;HSPA5|p.N522Ifs*12|1|0.36|ENSG00000044574|chr9:125236992-125236992|T/-|frameshift_variant	75.04331003522576	0.118981335847003	1				NaN	NaN	0	NaN	7261	5573	12835
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12848	39.598	NaN	1689.8	30	0	267.44	0.214	+			41313	SVLNVAALLA	10	53	485.8002119752013	969.5858710172026	2	485.80029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVLNVAALLA_	ENSG00000111011|ENST00000331738|RSRC2;ENST00000392442.6_1_12:122990076-122998315:-|nuORF;ENST00000433877.6_1_12:122990076-123005058:-|nuORF;nc|ENSG00000111011|Q7L4I2-2|RSRC2;RSRC2|p.R335Gfs*23|1|0.06|ENSG00000111011|chr12:122508250-122508250|T/-|frameshift_variant	49.44154591367651	0.46214596422418036	1				NaN	NaN	0	NaN	7264	5582	12847
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12849	39.601	NaN	818.61	30	0	59.145	0.106	+			23978	LDVLIVNGI	9	39	478.29480519067073	NaN	0	478.29571533203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LDVLIVNGI_	tr|U7T631|U7T631_FUSNUZinctransportsystemsubstrate-bindingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00357PE=3SV=1	29.14955571784316	0.3303970763161698	1				NaN	NaN	0	NaN	7265	5582	12847
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12850	39.603	NaN	1597.4	30	0	282.04	0.036			+	11920	FVCHNRVQ	8	51	530.2611286514356	1058.507704369671	2	530.2625732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_FVC(Carbamidomethyl (C))HNRVQ_	REV__ENST00000562325.5_1_16:65087800-65155878:-|nuORF	44.53106598305862	0.628196326904373	1				NaN	NaN	0	NaN	7266	5582	12847
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12860	39.638	NaN	2524.7	30	0	149.59	0.152			+	-1	RLKRFEMHRRC	11	66	535.6169701348188	1603.829081004656	3	535.9517822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_RLKRFEM(Oxidation (M))HRRC(Carbamidomethyl (C))_	REV__ENSG00000104814|ENST00000396857|MAP4K1;REV__ENST00000585583.5_1_19:39088111-39100659:-|nuORF;REV__nc|ENSG00000104814|Q92918|MAP4K1	9.21180021271957	0.8273556446088389	1				NaN	NaN	0	NaN	7270	5588	12859
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12869	39.671	NaN	2706.8	30	0	711.81	0.143	+			9247	EGVITKAIY	9	54	497.2843780314347	992.5542031296694	2	497.28497314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EGVITKAIY_	ENSG00000138768|ENST00000514213|USO1;nc|ENSG00000138768|O60763-2|USO1;USO1|p.I920Sfs*9|1|0.08|ENSG00000138768|chr4:75812332-75812333|-/GAGCTTT|frameshift_variant;USO1|p.K919Tfs*8|1|0.08|ENSG00000138768|chr4:75812331-75812332|-/C|frameshift_variant	66.42927471994793	0.16001998865088202	1				NaN	NaN	0	NaN	7273	5594	12868
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12875	39.689	NaN	1678	30	0	193.62	0.143	+			16050	HAVVNLINY	9	59	521.7877566726228	1041.5609604120455	2	522.2901611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HAVVNLINY_	CTNNB1|p.L301Hfs*16|1|0.05|ENSG00000168036|chr3:41225827-41225831|TTCAA/-|frameshift_variant;CTNNB1|p.M271Wfs*5|1|0.08|ENSG00000168036|chr3:41225733-41225733|A/-|frameshift_variant;ENSG00000168036|ENST00000349496|CTNNB1	38.80614096846853	0.43426287593479557	1				NaN	NaN	0	NaN	7276	5597	12874
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12887	39.725	NaN	2200.6	30	0	272.1	0.143				-1	 	0	53	490.295195864051	978.575838794902	2	490.2949523925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7282	5603	12886
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12912	39.827	NaN	2196.2	30	0	437.74	0.143	+			38745	SSLPTQLFK	9	45	510.78981634250255	1019.5650797518051	2	510.78985595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSLPTQLFK_	ENSG00000017427|ENST00000337514|IGF1;nc|ENSG00000017427|P05019-4|IGF1;nc|ENSG00000017427|P05019|IGF1	74.1650062923329	0.12277912660386392	1				NaN	NaN	0	NaN	7289	5621	12911
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12918	39.846	NaN	1314	30	0	234.52	0.141	+			36992	SIPGGYNAL	9	50	446.23223570780095	890.4499184824019	2	446.232177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIPGGYNAL_	ENSG00000135018|ENST00000376395|UBQLN1;ENSG00000160803|ENST00000368309|UBQLN4;ENSG00000188021|ENST00000338222|UBQLN2;ENST00000533705.5_1_9:86284090-86294929:-|nuORF;nc|ENSG00000135018|Q9UMX0-2|UBQLN1;nc|ENSG00000135018|Q9UMX0-3|UBQLN1;UBQLN2|p.N281Sfs*92|1|0.34|ENSG00000188021|chrX:56564713-56564725|GAATGCCGCACAA/-|frameshift_variant;UBQLN2|p.P525Lfs*71|10|0.37|ENSG00000188021|chrX:56565441-56565441|C/-|frameshift_variant;UBQLN4|p.A385Pfs*7|1|0.03|ENSG00000160803|chr1:156042886-156042887|GC/-|frameshift_variant;UBQLN4|p.R283H|1|0.14|ENSG00000160803|chr1:156048553-156048553|C/T|missense_variant	56.72105179125745	0.24094814563026265	1				NaN	NaN	0	NaN	7292	5624	12917
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12943	39.958	NaN	1564.9	30	0	227.72	0.143	+			26938	LYGKIAEAF	9	57	506.27953097628154	NaN	0	506.27911376953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LYGKIAEAF_	ENSG00000123159|ENST00000393033|GIPC1;ENST00000587811.1_1_19:14593203-14593794:-|nuORF;GIPC1|p.G115Afs*13|1|0.3|ENSG00000123159|chr19:14480723-14480723|C/-|frameshift_variant;GIPC1|p.R91H|1|0.19|ENSG00000123159|chr19:14482705-14482705|C/T|missense_variant	64.20726635412375	0.13137488984569443	1				NaN	NaN	0	NaN	7296	5645	12942
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12951	39.991	NaN	1087.7	30	0	126.58	0.212			+	28142	NAKICQNHLEQ	11	47	649.3177490234375	NaN	0	649.3177490234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAKICQNHLEQ_	REV__MYO3A|p.Q1568H|1|0.15|ENSG00000095777|chr10:26203081-26203081|G/T|missense_variant	19.1035232394073	0.456735970842152	1				NaN	NaN	0	NaN	7298	5651	12950
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12952	39.994	NaN	2641.3	30	0	195.78	0.106			+	-1	RLKRFEMHRRC	11	72	535.6165829459717	1603.8279194381148	3	535.952392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_RLKRFEM(Oxidation (M))HRRC(Carbamidomethyl (C))_	REV__ENSG00000104814|ENST00000396857|MAP4K1;REV__ENST00000585583.5_1_19:39088111-39100659:-|nuORF;REV__nc|ENSG00000104814|Q92918|MAP4K1	5.698786898958082	0.8438047409760123	1				NaN	NaN	0	NaN	7299	5651	12950
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12953	39.996	NaN	1597.4	30	0	218.84	0.035	+			7474	DGARLKKCF	9	59	519.2797868202559	1036.5450207073118	2	519.2800903320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DGARLKKCF_	ENSG00000185982|ENST00000334391|DEFB128	47.657333605630114	0.33044192980041115	1				NaN	NaN	0	NaN	7300	5651	12950
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12962	40.028	NaN	1994.8	30	0	419.58	0.142	+			18875	IVGTVLIIK	9	46	478.3314922918995	954.648431650599	2	478.8335876464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IVGTVLIIK_	ENSG00000231389|ENST00000419277|HLA-DPA1	84.9155231211612	0.07920012719736333	1				NaN	NaN	0	NaN	7303	5657	12961
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12969	40.047	NaN	1097.2	30	0	57.461	0.142			+	48619	VTSFDVKAV	9	50	483.26857340588026	964.5225938785605	2	483.2737731933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTSFDVKAV_	REV__ECT2L|p.W106Ifs*9|1|0.14|ENSG00000203734|chr6:138838487-138838488|-/ATAAATAT|frameshift_variant;REV__ENSG00000203734|ENST00000541398|ECT2L	31.634271133179894	0.507608568980346	1				NaN	NaN	0	NaN	7307	5660	12968
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12976	40.067	NaN	2210.2	30	0	194.59	0.143	+			28037	NAAKVFNLY	9	65	520.2821047344993	1038.5496565357985	2	520.282470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAAKVFNLY_	ENSG00000092964|ENST00000521913|DPYSL2;nc|ENSG00000092964|Q16555-2|DPYSL2;nc|ENSG00000092964|Q16555|DPYSL2	80.45461616416974	0.09558281504443908	1				NaN	NaN	0	NaN	7311	5663	12975
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12989	40.117	NaN	2658.5	30	0	526.66	0.214	+			38235	SQLGIFISK	9	58	496.79249805027547	991.570443167351	2	496.7922668457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SQLGIFISK_	ENSG00000120509|ENST00000239666|PDZD11;nc|ENSG00000120509|Q5EBL8-2|PDZD11	93.5975768576971	0.05472259948179787	1				NaN	NaN	0	NaN	7315	5672	12988
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12990	40.12	NaN	1614.3	30	0	232.65	0.034			+	43898	TNGLNVFVV	9	43	481.7689067826763	961.5232606321526	2	481.7685852050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TNGLNVFVV_	REV__ENSG00000124370|ENST00000244217|MCEE	38.80614096846853	0.43426287593479557	1				NaN	NaN	0	NaN	7316	5672	12988
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12995	40.135	NaN	1358.6	30	0	484.51	0.143			+	17311	IAENIYGVAV	10	48	524.78735848814	1047.5601640430798	2	524.7888793945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IAENIYGVAV_	REV__ENSG00000145703|ENST00000274364|IQGAP2;REV__IQGAP2|p.K608Nfs*42|1|0.36|ENSG00000145703|chr5:76637072-76637072|A/-|frameshift_variant;REV__IQGAP2|p.Q1499Rfs*15|1|0.05|ENSG00000145703|chr5:76701201-76701202|-/CCGAG|frameshift_variant;REV__IQGAP2|p.T881Hfs*2|2|0.3|ENSG00000145703|chr5:76665133-76665133|A/-|frameshift_variant;REV__nc|ENSG00000145703|Q13576-2|IQGAP2;REV__nc|ENSG00000145703|Q13576-3|IQGAP2	25.57405402267927	0.6709832231498071	1				NaN	NaN	0	NaN	7318	5675	12994
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13000	40.151	NaN	9981.7	30	0	1796.3	0.142	+			7305	DASKVVTVF	9	63	483.26857340588026	964.5225938785605	2	483.2688903808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DASKVVTVF_	ENSG00000071127|ENST00000499869|WDR1;ENST00000502962.5_1_4:10077004-10094774:-|nuORF;ENST00000515743.5_1_4:10078742-10093271:-|nuORF;nc|ENSG00000071127|O75083-3|WDR1	122.93914200107957	0.019420478173996256	1				NaN	NaN	0	NaN	7320	5678	12999
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13004	40.168	NaN	3616.3	30	0	267.81	0.152	+			33382	RHWTHRRVFYF	11	67	535.6165829459717	1603.8279194381148	3	535.9505004882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RHWTHRRVFYF_	ENST00000296575.7_1_4:145567307-145567847:+|nuORF	8.799314080144061	0.8292870418279382	1				NaN	NaN	0	NaN	7321	5681	13003
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13008	40.185	NaN	3634.1	30	0	595.92	0.214	+			36993	SIPGGYNAL	9	49	446.23195501103	890.44935708886	2	446.23199462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIPGGYNAL_	ENSG00000135018|ENST00000376395|UBQLN1;ENSG00000160803|ENST00000368309|UBQLN4;ENSG00000188021|ENST00000338222|UBQLN2;ENST00000533705.5_1_9:86284090-86294929:-|nuORF;nc|ENSG00000135018|Q9UMX0-2|UBQLN1;nc|ENSG00000135018|Q9UMX0-3|UBQLN1;UBQLN2|p.N281Sfs*92|1|0.34|ENSG00000188021|chrX:56564713-56564725|GAATGCCGCACAA/-|frameshift_variant;UBQLN2|p.P525Lfs*71|10|0.37|ENSG00000188021|chrX:56565441-56565441|C/-|frameshift_variant;UBQLN4|p.A385Pfs*7|1|0.03|ENSG00000160803|chr1:156042886-156042887|GC/-|frameshift_variant;UBQLN4|p.R283H|1|0.14|ENSG00000160803|chr1:156048553-156048553|C/T|missense_variant	96.19043198914106	0.047412499214244314	1				NaN	NaN	0	NaN	7322	5684	13007
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13009	40.189	NaN	2080.1	30	0	439.83	0.034	+			45876	VANPNSAIF	9	46	466.7452065579451	931.4758601826902	2	466.74554443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VANPNSAIF_	ENSG00000106682|ENST00000265753|EIF4H;nc|ENSG00000106682|Q15056-2|EIF4H	66.42927471994793	0.16001998865088202	1				NaN	NaN	0	NaN	7323	5684	13007
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13013	40.204	NaN	1637.2	30	0	354.97	0.214	+			35714	SDLKVIVM	8	49	452.76208359828706	903.5096142633741	2	452.761962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SDLKVIVM_	ENSG00000109606|ENST00000336812|DHX15	74.25504064058377	0.37144338840759816	1				NaN	NaN	0	NaN	7324	5687	13012
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13014	40.207	NaN	951.53	30	0	160.33	0.034			+	46989	VKQSKAASE	9	42	474.26294736995413	946.5113418067083	2	474.2625427246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VKQSKAASE_	REV__RFX7|p.K235Sfs*10|1|0.05|ENSG00000181827|chr15:56098193-56098193|T/-|frameshift_variant	36.446750945000026	0.4619375763483977	1				NaN	NaN	0	NaN	7325	5687	13012
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13019	40.222	NaN	1614.7	30	0	310.22	0.144			+	-1	VLFGGFIYM	9	53	531.770957938491	1061.527362943782	2	531.7711791992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_VLFGGFIYM(Oxidation (M))_	REV__ATRNL1|p.S600Lfs*32|1|0.15|ENSG00000107518|chr10:115266819-115266819|T/-|frameshift_variant	49.21078951299608	0.3122205139198386	1				NaN	NaN	0	NaN	7327	5690	13018
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13032	40.272	NaN	2771.6	30	0	976.83	0.152			+	-1	NRWKMRRNQFW	11	62	546.6148722794045	NaN	0	546.2802124023438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_NRWKM(Oxidation (M))RRNQFW_	REV__ENSG00000109851|ENST00000524983|DBX1;REV__ENSG00000185610|ENST00000332700|DBX2	3.408713201661513	0.456735970842152	1				NaN	NaN	0	NaN	7331	5699	13031
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13039	40.305	NaN	1052	30	0	203.17	0.142			+	26232	LSSNFLYI	8	46	478.7577225215304	955.5008921098608	2	478.7581481933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSSNFLYI_	REV__DCAF8L1|p.R449Gfs*6|1|0.34|ENSG00000226372|chrX:27979990-27979990|G/-|frameshift_variant;REV__ENSG00000226372|ENST00000441525|DCAF8L1	58.78195531508484	0.5138399468736706	1				NaN	NaN	0	NaN	7332	5705	13038
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13076	40.479	NaN	2418	30	0	346.15	0.142	+			18845	IVALILSTK	9	60	479.3209988468807	956.6274447605614	2	479.32049560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IVALILSTK_	ENSG00000185883|ENST00000330398|ATP6V0C	60.11826168202944	0.21262886028301267	1				NaN	NaN	0	NaN	7336	5738	13075
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13081	40.496	NaN	1365.8	30	0	148.34	0.143	+			41759	SVSNLVTVF	9	48	483.26857340588026	964.5225938785605	2	483.26898193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSNLVTVF_	ENSG00000146192|ENST00000274963|FGD2;ENST00000459781.5_1_6:36973566-36979631:+|nuORF;ENST00000464083.5_1_6:36973566-36981682:+|nuORF;ENST00000487975.5_1_6:36973566-36978850:+|nuORF;FGD2|p.K560Qfs*14|1|0.4|ENSG00000146192|chr6:37027495-37027496|-/G|frameshift_variant	66.96192283764107	0.15557981141143568	1				NaN	NaN	0	NaN	7338	5741	13080
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13086	40.512	NaN	4043.1	30	0	472.13	0.142	+			40634	SVAQLLLSK	9	62	479.80061143469317	957.5866699361864	2	479.800537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVAQLLLSK_	ENSG00000073614|ENST00000399788|KDM5A;ENST00000541335.1_1_12:431581-432275:-|nuORF;KDM5A|p.G1200Dfs*9|1|0.28|ENSG00000073614|chr12:307787-307787|T/-|frameshift_variant;KDM5A|p.V1093*|1|0.32|ENSG00000073614|chr12:309905-309905|T/-|frameshift_variant;KDM5A|p.V1093Sfs*20|1|0.21|ENSG00000073614|chr12:309904-309905|-/T|frameshift_variant;nc|ENSG00000073614|P29375-2|KDM5A	65.2775769800794	0.16962058972581526	1				NaN	NaN	0	NaN	7340	5744	13085
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13094	40.545	NaN	1586.7	30	0	161.53	0.153				-1	QWMKKWWEMKR	11	60	551.6124561267925	1651.8155389805775	3	551.61328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_QWM(Oxidation (M))KKWWEMKR_	ENSG00000130234|ENST00000252519|ACE2;nc|ENSG00000130234|Q9BYF1-3|ACE2	6.320883175729509	0.8408918793690873	1				NaN	NaN	0	NaN	7342	5750	13093
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13102	40.578	NaN	616.11	30	0	71.752	0.141	+			37648	SLQPSTKM	8	36	446.23214591288485	NaN	0	446.2322998046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLQPSTKM_	ENST00000464590.1_1_11:3844931-3845577:+|nuORF	44.116797842482775	1.7418937515398478	1				NaN	NaN	0	NaN	7344	5756	13101
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13113	40.614	NaN	4491.4	30	0	733.46	0.214	+			8468	EASKLLLTY	9	59	519.2978766683907	1036.5812004035813	2	519.298583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EASKLLLTY_	ENSG00000151092|ENST00000280700|NGLY1;ENST00000463611.1_1_3:25824608-25824881:-|nuORF;ENST00000474611.1_1_3:25819310-25824959:-|nuORF;ENST00000478991.1_1_3:25819998-25824881:-|nuORF;ENST00000493324.5_1_3:25778798-25824881:-|nuORF;nc|ENSG00000151092|Q96IV0-2|NGLY1;nc|ENSG00000151092|Q96IV0-3|NGLY1;NGLY1|p.I101Nfs*3|1|0.22|ENSG00000151092|chr3:25764256-25764257|-/T|frameshift_variant	138.8255168832474	0.011031062795199845	1				NaN	NaN	0	NaN	7349	5762	13112
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13114	40.618	NaN	2169	30	0	125.96	0.044			+	-1	RLKRFEMHRRC	11	65	535.6176815551008	NaN	0	535.6178588867188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_RLKRFEM(Oxidation (M))HRRC(Carbamidomethyl (C))_	REV__ENSG00000104814|ENST00000396857|MAP4K1;REV__ENST00000585583.5_1_19:39088111-39100659:-|nuORF;REV__nc|ENSG00000104814|Q92918|MAP4K1	13.507942900623993	0.456735970842152	1				NaN	NaN	0	NaN	7350	5762	13112
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13118	40.633	NaN	1578.7	30	0	158.59	0.142	+			3570	ASVAWAVLK	9	57	472.78211685648296	943.5496807797659	2	472.7817077636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASVAWAVLK_	ENSG00000106714|ENST00000297668|CNTNAP3;ENSG00000154529|ENST00000377561|CNTNAP3B;ENSG00000283378|ENST00000636699|CNTNAP3C;nc|ENSG00000154529|Q96NU0-2|CNTNAP3B;nc|ENSG00000283378|Q9BZ76-2|CNTNAP3	74.25504064058377	0.12238981753128622	1				NaN	NaN	0	NaN	7351	5765	13117
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13167	40.937	NaN	1194.6	30	0	176.64	0.143			+	31290	QIENGGLLGP	10	44	499.2713515158141	996.5281500984282	2	499.2715759277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QIENGGLLGP_	REV__ANGPTL1|p.W318Lfs*22|1|0.15|ENSG00000116194|chr1:178853660-178853661|-/C|frameshift_variant;REV__ENSG00000116194|ENST00000234816|ANGPTL1	31.634271133179894	0.6214930414500597	1				NaN	NaN	0	NaN	7361	5804	13166
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13175	40.969	NaN	1146.4	30	0	187.8	0.143	+			36718	SGTPQGLLVY	10	45	517.7815551757812	NaN	0	517.7815551757812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SGTPQGLLVY_	ENSG00000168060|ENST00000358658|NAALADL1;NAALADL1|p.A200Pfs*4|1|0.23|ENSG00000168060|chr11:65057376-65057376|C/-|frameshift_variant;NAALADL1|p.T687Rfs*4|1|0.25|ENSG00000168060|chr11:65045434-65045434|G/-|frameshift_variant;nc|ENSG00000168060|Q9UQQ1-3|NAALADL1;nc|ENSG00000168060|Q9UQQ1-4|NAALADL1;nc|ENSG00000168060|Q9UQQ1-5|NAALADL1;nc|ENSG00000168060|Q9UQQ1-6|NAALADL1;nc|ENSG00000168060|Q9UQQ1-7|NAALADL1;nc|ENSG00000168060|Q9UQQ1-8|NAALADL1	45.97224482568171	0.33106653400957564	1				NaN	NaN	0	NaN	7363	5810	13174
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13189	41.033	NaN	2002.2	30	0	539.06	0.144			+	48233	VTCFVAALQI	10	62	532.7961964068062	1063.5778398804123	2	532.796630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTCFVAALQI_	REV__ENST00000265062.7_1_3:128533000-128533144:+|nuORF	34.172542307311794	0.6007644933930345	1				NaN	NaN	0	NaN	7365	5822	13188
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13216	41.147	NaN	713.13	30	0	79.353	0.143	+			2183	ALNAGSYASL	10	40	483.74789072815815	NaN	0	483.7478942871094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ALNAGSYASL_	CLASP2|p.L1169Ffs*6|1|0.14|ENSG00000163539|chr3:33510729-33510730|-/A|frameshift_variant;CLASP2|p.M744Nfs*4|1|0.19|ENSG00000163539|chr3:33560868-33560869|-/T|frameshift_variant;CLASP2|p.M744Wfs*33|2|0.29|ENSG00000163539|chr3:33560869-33560869|T/-|frameshift_variant;ENSG00000163539|ENST00000682230|CLASP2;nc|ENSG00000163539|O75122-2|CLASP2;nc|ENSG00000163539|O75122-3|CLASP2;nc|ENSG00000163539|O75122|CLASP2	30.317721548370564	0.4006274431774794	1				NaN	NaN	0	NaN	7371	5843	13215
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13223	41.178	NaN	1124.5	30	0	108.93	0.143	+			47010	VKVQGQGGNF	10	42	517.2754434438917	NaN	0	517.2752075195312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VKVQGQGGNF_	ENST00000604957.1_2_X:101855873-101855999:+|nuORF	42.396135135203025	0.3536752194735987	1				NaN	NaN	0	NaN	7372	5849	13222
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13235	41.227	NaN	2010.1	30	0	427.02	0.141	+			12558	GEGKLFSL	8	44	425.7371894802344	849.4598260272688	2	425.73724365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEGKLFSL_	ENSG00000132383|ENST00000254719|RPA1;RPA1|p.N274Mfs*5|1|0.18|ENSG00000132383|chr17:1879272-1879272|A/-|frameshift_variant	69.6276240434122	0.4100012001731381	1				NaN	NaN	0	NaN	7375	5858	13234
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13239	41.244	NaN	1081.1	30	0	95.875	0.142			+	46580	VFNLTNIF	8	40	484.2664347687971	966.5183166043943	2	484.2669982910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VFNLTNIF_	REV__ENSG00000197603|ENST00000651892|CPLANE1;REV__nc|ENSG00000197603|Q9H799-5|CPLANE1;REV__nc|ENSG00000197603|Q9H799|CPLANE1	38.80614096846853	0.6637206697844082	1				NaN	NaN	0	NaN	7376	5861	13238
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13285	41.439	NaN	1156.4	30	0	334.49	0.142			+	-1	GKNCAKVVM	9	48	483.2506964426423	NaN	0	483.25091552734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_GKNCAKVVM(Oxidation (M))_	REV__NGEF|p.E456K|1|0.29|ENSG00000066248|chr2:232885351-232885351|C/T|missense_variant	40.5726180659479	0.27166212580479165	1				NaN	NaN	0	NaN	7386	5897	13284
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13314	41.581	NaN	2207.1	30	0	200.17	0.144				-1	HMDIDKVAF	9	48	546.2643432617188	NaN	0	546.2643432617188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_HM(Oxidation (M))DIDKVAF_	ENSG00000165092|ENST00000297785|ALDH1A1;ENST00000482210.5_1_9:75538907-75567871:-|nuORF	44.116797842482775	0.2472372736944149	1				NaN	NaN	0	NaN	7388	5924	13313
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13335	41.676	NaN	1879.3	30	0	166.31	0.144	+			48091	VSTDPEQVAF	10	55	546.7629196763912	1091.5112864195823	2	546.7661743164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSTDPEQVAF_	ZNF135|p.T15A|1|0.31|ENSG00000176293|chr19:58061589-58061589|A/G|missense_variant	25.57405402267927	0.6709832231498071	1				NaN	NaN	0	NaN	7391	5942	13334
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13383	41.9	NaN	903.89	30	0	96.042	0.143	+			35197	SAIVEIFSK	9	50	497.28448291931744	NaN	0	497.2852478027344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAIVEIFSK_	ENSG00000050405|ENST00000341247|LIMA1;LIMA1|p.T536Lfs*38|2|0.4|ENSG00000050405|chr12:50177739-50177739|G/-|frameshift_variant;nc|ENSG00000050405|Q9UHB6-4|LIMA1	42.86426827375447	0.2558691296974908	1				NaN	NaN	0	NaN	7397	5984	13382
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13397	41.964	NaN	702.47	30	0	77.307	0.142	+			7904	DSALHGPIF	9	44	478.7470394671	NaN	0	478.74700927734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DSALHGPIF_	CNTN4|p.T22A|1|0.13|ENSG00000144619|chr3:2736223-2736223|A/G|missense_variant	25.450171626174864	0.34907449758287085	1				NaN	NaN	0	NaN	7399	5996	13396
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13445	42.202	NaN	1481.6	30	0	142.64	0.143	+			41101	SVINVFVGR	9	44	495.7905627168175	989.566572500435	2	495.79095458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVINVFVGR_	ENSG00000135540|ENST00000343505|NHSL1;nc|ENSG00000135540|Q5SYE7|NHSL1;NHSL1|p.E1312Gfs*27|1|0.12|ENSG00000135540|chr6:138430422-138430423|-/C|frameshift_variant;NHSL1|p.I1199Ffs*26|1|0.44|ENSG00000135540|chr6:138430763-138430763|G/-|frameshift_variant;NHSL1|p.P932Rfs*70|1|0.13|ENSG00000135540|chr6:138431562-138431562|G/-|frameshift_variant	90.60085204095205	0.06317133949006545	1				NaN	NaN	0	NaN	7402	6041	13444
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13452	42.233	NaN	2013.8	30	0	575.88	0.14				-1	 	0	41	405.80673370910455	809.5989144850091	2	405.8069763183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7403	6047	13451
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13459	42.265	NaN	2216.4	30	0	781.81	0.144			+	46137	VDLSYKAWK	9	63	555.3036359122214	1108.5927188912426	2	555.3050537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VDLSYKAWK_	REV__ENSG00000275835|ENST00000615383|TUBGCP5;REV__nc|ENSG00000275835|Q96RT8-2|TUBGCP5	40.77816245573522	0.41113185337114944	1				NaN	NaN	0	NaN	7404	6053	13458
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13470	42.313	NaN	1036.4	30	0	258.93	0.144	+			18286	IPNEIIHAL	9	45	510.29834074586734	NaN	0	510.2982482910156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IPNEIIHAL_	ENSG00000099783|ENST00000325495|HNRNPM;HNRNPM|p.M346Wfs*22|1|0.25|ENSG00000099783|chr19:8473699-8473699|A/-|frameshift_variant	29.170058357718403	0.3302935627494407	1				NaN	NaN	0	NaN	7406	6062	13469
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13568	42.765	NaN	1113.3	30	0	227.15	0.214	+			11634	FQGASNLTL	9	43	475.75096841535384	949.4873838975077	2	475.75146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FQGASNLTL_	DDX18|p.K110Efs*11|1|0.42|ENSG00000088205|chr2:117817678-117817679|-/A|frameshift_variant;ENSG00000088205|ENST00000263239|DDX18	46.45678178249821	0.34452392205506005	1				NaN	NaN	0	NaN	7420	6146	13567
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13569	42.768	NaN	687.23	30	0	135.92	0.034			+	-1	GAPGELCASL	10	24	487.7328796386719	NaN	0	487.7328796386719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GAPGELC(Carbamidomethyl (C))ASL_	REV__ENST00000421890.5_1_7:5880326-5880371:+|nuORF	10.265252068803164	0.42010282974921537	1				NaN	NaN	0	NaN	7421	6146	13567
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13586	42.847	NaN	1740.6	30	0	388.04	0.144	+			2318	AMLDTVVFK	9	55	512.280784431528	1022.547015929856	2	512.2819213867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AMLDTVVFK_	ENSG00000115233|ENST00000409682|PSMD14;ENST00000477232.5_1_2:162241962-162267908:+|nuORF;ENST00000492908.1_1_2:162265323-162267908:+|nuORF	87.69643885390035	0.07135982304947239	1				NaN	NaN	0	NaN	7423	6161	13585
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13638	43.108	NaN	2384.4	30	0	99.87	0.154				-1	 	0	65	737.7064851835635	2210.0976261508904	3	738.0423583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7427	6209	13637
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13653	43.175	NaN	995.86	30	0	107.85	0.143			+	22880	KVLIGDYTL	9	49	511.30073194345306	NaN	0	511.30084228515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVLIGDYTL_	REV__ENST00000337872.8_1_4:4304620-4317556:+|nuORF	38.80614096846853	0.28164298475537564	1				NaN	NaN	0	NaN	7430	6221	13652
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13676	43.291	NaN	858.82	30	0	61.624	0.14	+			30033	PPRARAGG	8	47	391.2251066999606	NaN	0	391.224853515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PPRARAGG_	ENSG00000137261|ENST00000378214|KIAA0319;nc|ENSG00000137261|Q5VV43-2|KIAA0319;nc|ENSG00000137261|Q5VV43-3|KIAA0319;nc|ENSG00000137261|Q5VV43-4|KIAA0319	33.51558372728122	1.7418937515398478	1				NaN	NaN	0	NaN	7432	6242	13675
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13681	43.308	NaN	1981.1	30	0	272.98	0.144	+			252	AAMLDTVVFK	10	56	547.7990346726682	1093.5835164121363	2	547.8007202148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAMLDTVVFK_	ENSG00000115233|ENST00000409682|PSMD14;ENST00000477232.5_1_2:162241962-162267908:+|nuORF;ENST00000492908.1_1_2:162265323-162267908:+|nuORF	63.53385203322761	0.33370026130094593	1				NaN	NaN	0	NaN	7434	6245	13680
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13702	43.408	NaN	2018	30	0	728.06	0.145			+	33372	RHRVGFHHM	9	63	588.7999091204981	1175.5852653077961	2	588.800537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RHRVGFHHM_	REV__ENSG00000138867|ENST00000435822|GUCD1;REV__ENST00000468170.1_1_22:24943827-24950959:-|nuORF;REV__ENST00000490922.1_1_22:24936902-24943992:-|nuORF;REV__nc|ENSG00000138867|Q96NT3-3|GUCD1;REV__nc|ENSG00000138867|Q96NT3|GUCD1	40.77816245573522	0.41113185337114944	1				NaN	NaN	0	NaN	7437	6263	13701
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13751	43.647	NaN	725.51	30	0	52.647	0.14			+	33347	RHGGKGGL	8	36	391.22500551114416	780.4354580890883	2	391.22503662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RHGGKGGL_	REV__tr|U7T3R4|U7T3R4_FUSNUGlycerolkinaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=glpKPE=3SV=1	14.664097394203935	0.7913966407026132	1				NaN	NaN	0	NaN	7441	6308	13750
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13766	43.712	NaN	452.96	30	0	101.22	0.215				-1	 	0	25	327.1650105490204	652.3154681648408	2	327.1653747558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7444	6320	13765
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13767	43.716	NaN	458	30	0	194.61	0.03			+	13064	GFGFGAGG	8	20	335.15370091956913	668.2928489059383	2	335.1537780761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GFGFGAGG_	REV__CON__Q6IFZ6	1.619023411512541	0.7811762264352071	1				NaN	NaN	0	NaN	7445	6320	13765
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13876	44.252	NaN	643.33	30	0	41.587	0.141	+			11984	FVQDVPAL	8	40	444.74477270182535	NaN	0	444.744873046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FVQDVPAL_	ENSG00000141161|ENST00000394570|UNC45B;nc|ENSG00000141161|Q8IWX7|UNC45B	45.9519527083369	1.7418937515398478	1				NaN	NaN	0	NaN	7452	6422	13875
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13968	44.717	NaN	996.66	30	0	86.487	0.14			+	-1	KLVCSLYLNK	10	47	413.2382959349061	NaN	0	413.23834228515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_KLVC(Carbamidomethyl (C))SLYLNK_	REV__ENSG00000125538|ENST00000263341|IL1B;REV__ENST00000487639.1_1_2:113588742-113591137:-|nuORF;REV__ENST00000491056.5_1_2:113587940-113590763:-|nuORF	24.231819034082204	0.4201028297492154	1				NaN	NaN	0	NaN	7457	6509	13967
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14152	45.608	NaN	3434.1	30	0	835.54	0.143	+			41300	SVLNLVIVK	9	58	492.826346812721	983.638140692242	2	492.826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVLNLVIVK_	ENSG00000137154|ENST00000380394|RPS6;ENST00000464444.1_1_19:13005132-13005321:+|nuORF	112.41091882917199	0.026537921851008135	1				NaN	NaN	0	NaN	7473	6677	14151
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14179	45.737	NaN	2810.1	30	0	623.72	0.141	+			15858	GYGGGFGNF	9	50	438.187817909167	874.361082885134	2	438.1875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GYGGGFGNF_	ENSG00000115271|ENST00000437150|GCA;ENST00000479199.1_1_2:163200728-163213435:+|nuORF;ENST00000481161.5_1_2:163200677-163213018:+|nuORF;ENST00000487445.6_1_2:163200677-163215720:+|nuORF	123.9887779854562	0.018785054595953452	1				NaN	NaN	0	NaN	7476	6701	14178
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14327	46.474	NaN	705.56	30	0	78.167	0.143	+			29139	NVADVVIKF	9	41	502.7925146343603	1003.5704763355207	2	502.7928771972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NVADVVIKF_	ENSG00000118705|ENST00000237530|RPN2;nc|ENSG00000118705|P04844-2|RPN2	44.377184641726394	0.36891676396732553	1				NaN	NaN	0	NaN	7489	6836	14326
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14337	46.522	NaN	1688.5	30	0	179.36	0.153			+	7862	DRCWYWRRRHL	11	60	549.6139526367188	NaN	0	549.6139526367188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DRCWYWRRRHL_	REV__ENST00000399627.3_1_22:50905837-50906184:-|nuORF	3.408713201661513	0.456735970842152	1				NaN	NaN	0	NaN	7490	6845	14336
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14349	46.571	NaN	293.59	30	0	16.769	0.141			+	-1	KTPMLTAI	8	24	445.75463389593426	889.4947148586685	2	445.75445556640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_KTPM(Oxidation (M))LTAI_	REV__ENSG00000103197|ENST00000219476|TSC2;REV__ENST00000569930.1_1_16:2133412-2138608:+|nuORF;REV__nc|ENSG00000103197|P49815-2|TSC2;REV__nc|ENSG00000103197|P49815-3|TSC2;REV__nc|ENSG00000103197|P49815-4|TSC2;REV__nc|ENSG00000103197|P49815-5|TSC2;REV__nc|ENSG00000103197|P49815-6|TSC2;REV__nc|ENSG00000103197|P49815-7|TSC2	23.04248740728303	0.7814162927298575	1				NaN	NaN	0	NaN	7493	6854	14348
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14521	47.407	NaN	721.35	30	0	29.471	0.142			+	30396	PVRLGTDR	8	43	457.26421639704165	NaN	0	457.2637939453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PVRLGTDR_	REV__ENSG00000163352|ENST00000392487|LENEP	24.20275056022122	1.7418937515398478	1				NaN	NaN	0	NaN	7509	7010	14520
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14578	47.697	NaN	1057	30	0	170.62	0.14	+			18751	ITLATVLS	8	35	409.25536048056	NaN	0	409.255615234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ITLATVLS_	ENSG00000179546|ENST00000374619|HTR1D;HTR1D|p.P173Rfs*18|1|0.14|ENSG00000179546|chr1:23193702-23193702|G/-|frameshift_variant	52.29916861842294	1.7418937515398478	1				NaN	NaN	0	NaN	7512	7064	14577
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14905	49.264	NaN	1474.3	30	0	1019.4	0.138				-1	 	0	25	340.2596315761548	678.5047102191096	2	340.2596435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7548	7355	14904
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15127	50.249	NaN	668.81	30	0	59.66	0.144			+	28624	NKVELVPTSV	10	37	543.313651709156	NaN	0	543.31396484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NKVELVPTSV_	REV__ENSG00000164483|ENST00000439090|SAMD3;REV__nc|ENSG00000164483|Q8N6K7-3|SAMD3	44.377184641726394	0.34115073642966565	1				NaN	NaN	0	NaN	7590	7535	15126
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	1911	10.138	NaN	296	30	0	199.19	0.146			+	18135	ILIFLYSILT	10	10	399.25049856621797	NaN	0	399.2503662109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ILIFLYSILT_	REV__ENSG00000197786|ENST00000357377|OR5B17	4.612557629759915	0.4201028297492154	1				NaN	NaN	0	NaN	0	1909	1910
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2125	11.356	NaN	2596.7	30	0	1754	0.214			+	13903	GRICRLPPL	9	20	512.8087124099189	1023.6028718866379	2	512.8090209960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GRICRLPPL_	REV__ENST00000355943.7_1_5:110074761-110074947:+|nuORF	7.690282842768113	0.6112419832031293	1				NaN	NaN	0	NaN	1	2122	2124
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2126	11.359	NaN	1565.2	30	0	755.4	0.035	+			21068	KKLLIQMK	8	22	501.3306134343768	NaN	0	501.33026123046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KKLLIQMK_	ENSG00000214414|ENST00000398290|TRIM77	6.735540347417125	1.7418937515398478	1				NaN	NaN	0	NaN	2	2122	2124
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2176	11.614	NaN	13301	30	0	6044.4	0.214			+	-1	VKCAHTKQ	8	42	486.25839017207204	970.5022274109441	2	486.2584533691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_VKC(Carbamidomethyl (C))AHTKQ_	REV__ENSG00000175691|ENST00000314531|ZNF77	55.50420428727701	0.5462892107279674	1				NaN	NaN	0	NaN	4	2170	2175
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2177	11.617	NaN	6563.9	30	0	1327	0.106	+			7390	DECALRTHT	9	55	523.2398715547288	1044.4651901762575	2	523.2404174804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DECALRTHT_	ENSG00000165973|ENST00000357134|NELL1;nc|ENSG00000165973|Q92832-2|NELL1	23.04248740728303	0.5879033540491928	1				NaN	NaN	0	NaN	5	2170	2175
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2178	11.619	NaN	21355	30	0	11746	0.106	+			34428	RTVGVSKKK	9	72	334.8852584586789	1001.6339459762366	3	334.8852844238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RTVGVSKKK_	ENSG00000231500|ENST00000439602|RPS18;ENST00000412454.1_1_17:14608395-14608521:-|nuORF	85.86182877749512	0.07653218437724067	1				NaN	NaN	0	NaN	6	2170	2175
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2179	11.621	NaN	4797.3	30	0	2859	0.106			+	31065	QEYVQEEE	8	18	527.2216528669557	1052.4287528007112	2	527.2210693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QEYVQEEE_	REV__ENSG00000183977|ENST00000389050|PP2D1;REV__nc|ENSG00000183977|A8MPX8-2|PP2D1;REV__nc|ENSG00000183977|A8MPX8-3|PP2D1	12.206847966760668	0.7875100812264838	1				NaN	NaN	0	NaN	7	2170	2175
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2180	11.623	NaN	10508	30	0	3847	0.106	+			34046	RSLVRHKM	8	45	513.8035940601882	1025.5926351871763	2	513.8042602539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RSLVRHKM_	ORAI2|p.T227M|1|0.35|ENSG00000160991|chr7:102446967-102446967|C/T|missense_variant	19.359975847455235	0.7988239741663654	1				NaN	NaN	0	NaN	8	2170	2175
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2181	11.625	NaN	3956.6	30	0	1791.8	0.106	+			11312	FKVNTDYE	8	23	508.2410318073561	1014.4675106815122	2	508.2412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FKVNTDYE_	ENSG00000147050|ENST00000611820|KDM6A;KDM6A|p.N634Tfs*57|1|0.26|ENSG00000147050|chrX:45063791-45063791|A/-|frameshift_variant;KDM6A|p.N906Mfs*31|1|0.53|ENSG00000147050|chrX:45076707-45076707|A/-|frameshift_variant;KDM6A|p.S456Vfs*29|1|0.53|ENSG00000147050|chrX:45061358-45061359|-/G|frameshift_variant;KDM6A|p.T1081Pfs*2|1|0.15|ENSG00000147050|chrX:45082743-45082743|A/-|frameshift_variant;nc|ENSG00000147050|O15550|KDM6A	12.206847966760668	0.7875100812264838	1				NaN	NaN	0	NaN	9	2170	2175
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2182	11.626	NaN	4739.4	30	0	1577.7	0.034	+			3498	ASSKDAIKK	9	50	474.2794066016001	946.5442602700002	2	474.27880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASSKDAIKK_	DSTN|p.Y117H|1|0.26|ENSG00000125868|chr20:17604592-17604592|T/C|missense_variant;ENSG00000125868|ENST00000246069|DSTN;ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000400899.2_1_1:11051144-11051557:-|nuORF;ENST00000530945.1_1_11:65623104-65623215:-|nuORF;nc|ENSG00000125868|P60981-2|DSTN;nc|ENSG00000165410|Q9Y281-3|CFL2	66.96192283764107	0.15557981141143568	1				NaN	NaN	0	NaN	10	2170	2175
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2188	11.643	NaN	7339.8	30	0	4554.6	0.214			+	-1	MLIIWCAAG	9	39	497.24912120857454	992.4836894839491	2	497.24920654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))LIIWCAAG_	REV__ENSG00000169855|ENST00000464233|ROBO1;REV__nc|ENSG00000169855|Q9Y6N7-2|ROBO1;REV__nc|ENSG00000169855|Q9Y6N7-3|ROBO1;REV__nc|ENSG00000169855|Q9Y6N7-4|ROBO1;REV__nc|ENSG00000169855|Q9Y6N7-5|ROBO1;REV__nc|ENSG00000169855|Q9Y6N7-6|ROBO1;REV__ROBO1|p.K1491Nfs*16|1|0.2|ENSG00000169855|chr3:78607004-78607004|C/-|frameshift_variant;REV__ROBO1|p.R1504Sfs*40|1|0.01|ENSG00000169855|chr3:78606968-78606969|-/TGAC|frameshift_variant	29.841539824830324	0.5243625958137083	1				NaN	NaN	0	NaN	13	2173	2187
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2189	11.646	NaN	9777.2	30	0	2839.5	0.106				-1	CRKNKNDIS	9	25	567.787132963742	1133.559712994284	2	567.787841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_C(Carbamidomethyl (C))RKNKNDIS_	ENSG00000173706|ENST00000311127|HEG1	12.206847966760668	0.6112419832031292	1				NaN	NaN	0	NaN	14	2173	2187
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2190	11.648	NaN	3627.3	30	0	1405.7	0.106			+	28302	NEELFYSV	8	53	500.73572256170837	999.4568921902168	2	500.73553466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NEELFYSV_	REV__tr|U7SJ70|U7SJ70_FUSNUPara-aminobenzoatesynthetasecomponentIIOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02129PE=4SV=1	23.04248740728303	0.7814162927298575	1				NaN	NaN	0	NaN	15	2173	2187
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2191	11.65	NaN	3494.8	30	0	1583.1	0.106				-1	 	0	32	493.25305680685096	984.491560680502	2	493.2530822753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	16	2173	2187
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2192	11.652	NaN	3128.8	30	0	1636.4	0.106				-1	 	0	35	323.71593322560113	645.4173135180023	2	323.7159118652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	17	2173	2187
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2193	11.654	NaN	1390.5	30	0	154.16	0.106	+			21035	KKKKKGGGGP	10	36	328.8816734170453	983.623190851336	3	328.8818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KKKKKGGGGP_	nc|ENSG00000100490|Q00532-2|CDKL1	27.047317107675042	0.6589519614906109	1				NaN	NaN	0	NaN	18	2173	2187
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2194	11.655	NaN	3725.2	30	0	1578.6	0.035			+	-1	GAQDMPECK	9	26	518.2164870016923	1034.4184210701844	2	518.216552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_GAQDMPEC(Carbamidomethyl (C))K_	REV__ENST00000423405.1_1:144606371-144612374:+|nuORF	20.94693142431847	0.6074874384046576	1				NaN	NaN	0	NaN	19	2173	2187
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2199	11.67	NaN	2077.9	30	0	1145.1	0.214			+	10042	ESCGLLEVF	9	21	498.73797607421875	NaN	0	498.73797607421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ESCGLLEVF_	REV__RAD50|p.R1279C|1|0.9|ENSG00000113522|chr5:132642260-132642260|C/T|missense_variant	11.511019455917149	0.3980220838287494	1				NaN	NaN	0	NaN	21	2176	2198
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2200	11.673	NaN	2739.9	30	0	706.78	0.106			+	29806	PKEGMHIKQ	9	31	534.2860279060654	1066.5575028789308	2	534.2289428710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PKEGMHIKQ_	REV__ENSG00000128000|ENST00000434248|ZNF780B;REV__ZNF184|p.T357M|1|0.14|ENSG00000096654|chr6:27452489-27452489|G/A|missense_variant;REV__ZNF780B|p.K620Dfs*2|1|0.08|ENSG00000128000|chr19:40035001-40035002|-/TAATC|frameshift_variant	21.9598887501803	0.5980208138527809	1				NaN	NaN	0	NaN	22	2176	2198
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2201	11.675	NaN	1538.8	30	0	340.76	0.106				-1	KRPMGPVHY	9	25	550.784912109375	NaN	0	550.784912109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_KRPM(Oxidation (M))GPVHY_	CCDC174|p.K303Rfs*2|1|0.27|ENSG00000154781|chr3:14668131-14668131|A/-|frameshift_variant;ENSG00000154781|ENST00000383794|CCDC174;ENST00000465759.1_1_3:14693292-14708492:+|nuORF	19.359975847455235	0.3714571876404798	1				NaN	NaN	0	NaN	23	2176	2198
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2202	11.677	NaN	2063.7	30	0	422.56	0.106				-1	ERIMDEKTA	9	11	554.7669067382812	NaN	0	554.7669067382812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_ERIM(Oxidation (M))DEKTA_	ENSG00000148835|ENST00000369839|TAF5;nc|ENSG00000148835|Q15542-2|TAF5	6.735540347417125	0.4072763090772754	1				NaN	NaN	0	NaN	24	2176	2198
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2203	11.679	NaN	1623.8	30	0	573.56	0.106			+	-1	CFHRRTDR	8	18	574.2789916992188	NaN	0	574.2789916992188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_C(Carbamidomethyl (C))FHRRTDR_	REV__UBE3C|p.N620H|1|0.14|ENSG00000009335|chr7:157216915-157216915|A/C|missense_variant	12.959181472943097	1.7418937515398478	1				NaN	NaN	0	NaN	25	2176	2198
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2204	11.681	NaN	1120.4	30	0	208.58	0.106	+			595	ADLRPCHHHA	10	13	578.7764282226562	NaN	0	578.7764282226562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ADLRPCHHHA_	ENST00000589582.5_1_17:74470609-74471208:-|nuORF;ENST00000590168.5_1_17:74470614-74471208:-|nuORF	10.265252068803164	0.42010282974921537	1				NaN	NaN	0	NaN	26	2176	2198
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2205	11.683	NaN	637.66	30	0	135.37	0.037			+	-1	IQTASASLCSS	11	15	562.7649536132812	NaN	0	562.7649536132812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_IQTASASLC(Carbamidomethyl (C))SS_	REV__ENST00000604665.1_1_19:58379289-58379556:+|nuORF	9.705651100619752	0.456735970842152	1				NaN	NaN	0	NaN	27	2176	2198
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2246	11.888	NaN	2320	30	0	749.91	0.142	+			33403	RIESLPIK	8	39	478.29999469369557	NaN	0	478.30010986328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RIESLPIK_	COL9A1|p.P396Qfs*33|1|0.39|ENSG00000112280|chr6:70270324-70270324|G/-|frameshift_variant;ENSG00000112280|ENST00000357250|COL9A1;nc|ENSG00000112280|P20849-3|COL9A1	79.45101966838831	1.7418937515398478	1				NaN	NaN	0	NaN	29	2215	2245
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2268	11.999	NaN	1670.2	30	0	638.87	0.143	+			3410	ASQKALKEK	9	39	501.8005293957902	1001.5865058583804	2	501.8010559082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASQKALKEK_	ENSG00000131143|ENST00000253452|COX4I1;ENST00000567266.5_1_16:85833348-85838718:+|nuORF;ENST00000569997.1_1_16:85838427-85838718:+|nuORF	58.22992032128504	0.22837015374068087	1				NaN	NaN	0	NaN	30	2236	2267
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2296	12.144	NaN	1169.7	30	0	369.21	0.214	+			42223	TAAKSITKK	9	38	474.29734615023045	946.5801393672609	2	474.2972106933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAAKSITKK_	ENSG00000133574|ENST00000255945|GIMAP4	80.45461616416974	0.09558281504443908	1				NaN	NaN	0	NaN	31	2263	2295
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2297	12.147	NaN	1669.6	30	0	526.74	0.035	+			16263	HEFVDILGL	9	21	521.7802627455907	NaN	0	521.7796020507812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HEFVDILGL_	chr12:15595640-15596090|345|13.48|0.69|4.28|+|ENST00000674286|PTPRO,PTPRO;ENSG00000151490|ENST00000281171|PTPRO;nc|ENSG00000151490|Q16827-2|PTPRO;nc|ENSG00000151490|Q16827-3|PTPRO;nc|ENSG00000151490|Q16827-4|PTPRO	19.1035232394073	0.3723251548669699	1				NaN	NaN	0	NaN	32	2263	2295
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2310	12.211	NaN	1491.3	30	0	315.36	0.142	+			34976	SAAPPQEKK	9	37	478.2637006866312	NaN	0	478.2635803222656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAAPPQEKK_	CAST|p.E474Kfs*10|1|0.39|ENSG00000153113|chr5:96754695-96754695|A/-|frameshift_variant;ENSG00000153113|ENST00000675179|CAST;ENST00000513666.5_1_5:96073558-96090478:+|nuORF;nc|ENSG00000153113|P20810-10|CAST;nc|ENSG00000153113|P20810-2|CAST;nc|ENSG00000153113|P20810-3|CAST;nc|ENSG00000153113|P20810-4|CAST;nc|ENSG00000153113|P20810-5|CAST;nc|ENSG00000153113|P20810-7|CAST;nc|ENSG00000153113|P20810-8|CAST;nc|ENSG00000153113|P20810-9|CAST;nc|ENSG00000153113|P20810|CAST	35.15202426646627	0.3000918603816441	1				NaN	NaN	0	NaN	33	2275	2309
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2314	12.228	NaN	770.17	30	0	125.21	0.144	+			21198	KLDKYELAV	9	29	539.8095703125	NaN	0	539.8095703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KLDKYELAV_	ENSG00000130035|ENST00000252318|GALNT8	44.377184641726394	0.24544280798894275	1				NaN	NaN	0	NaN	34	2278	2313
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2319	12.245	NaN	2997.5	30	0	1085.3	0.143			+	-1	EMGSNMALR	9	23	520.7297002191821	1039.444847505164	2	520.7305297851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_EM(Oxidation (M))GSNM(Oxidation (M))ALR_	REV__ENST00000435733.1_1_17:31203795-31204937:+|nuORF	17.364965105453717	0.6112419832031293	1				NaN	NaN	0	NaN	36	2281	2318
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2324	12.262	NaN	4363.3	30	0	1321.8	0.213			+	26642	LVDHSPSPDLE	11	31	604.7911079943705	NaN	0	604.7905883789062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LVDHSPSPDLE_	REV__ENST00000429182.5_1_3:49061987-49062130:-|nuORF	14.137123925751023	0.456735970842152	1				NaN	NaN	0	NaN	38	2284	2323
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2325	12.266	NaN	1653.8	30	0	543.71	0.106			+	32501	QVQARQLSS	9	45	508.7788066552019	NaN	0	508.75018310546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QVQARQLSS_	REV__ENSG00000153066|ENST00000283033|TXNDC11;REV__nc|ENSG00000153066|Q6PKC3|TXNDC11	44.116797842482775	0.2472372736944149	1				NaN	NaN	0	NaN	39	2284	2323
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2326	12.267	NaN	1667.1	30	0	376.69	0.037			+	-1	DEPSCSGGNEC	11	21	577.6881713867188	NaN	0	577.6881713867188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_DEPSCSGGNEC(Carbamidomethyl (C))_	REV__ENSG00000157890|ENST00000395614|MEGF11;REV__MEGF11|p.G599Wfs*42|1|0.13|ENSG00000157890|chr15:65922851-65922852|-/G|frameshift_variant;REV__nc|ENSG00000157890|A6BM72-2|MEGF11;REV__nc|ENSG00000157890|A6BM72-3|MEGF11;REV__nc|ENSG00000157890|A6BM72|MEGF11	7.804521658770766	0.456735970842152	1				NaN	NaN	0	NaN	40	2284	2323
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2335	12.299	NaN	1585.1	30	0	491.34	0.144			+	33353	RHKPAEAQH	9	40	537.2812964041963	1072.5480398751924	2	537.2816162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RHKPAEAQH_	REV__ENST00000528438.5_2_17:72732794-72739442:+|nuORF	24.20275056022122	0.577060078256802	1				NaN	NaN	0	NaN	43	2290	2334
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2345	12.348	NaN	1296.6	30	0	499.53	0.143	+			3416	ASQKNFKAK	9	36	511.2938598246646	NaN	0	511.29315185546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASQKNFKAK_	ENSG00000176731|ENST00000619594|RBIS;ENST00000523245.1_1_8:86129602-86132627:-|nuORF;nc|ENSG00000176731|Q8N0T1-2|RBIS	45.97224482568171	0.23445038899310136	1				NaN	NaN	0	NaN	44	2299	2344
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2355	12.396	NaN	3017.7	30	0	453.59	0.141	+			32	AAAKPVATK	9	55	428.7661525735406	855.5177522138812	2	428.76617431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAAKPVATK_	COL6A3|p.G3016Vfs*19|1|0.34|ENSG00000163359|chr2:237334810-237334810|G/-|frameshift_variant;ENSG00000163359|ENST00000295550|COL6A3;ENST00000491769.1_1_2:238233419-238250825:-|nuORF;nc|ENSG00000163359|P12111-2|COL6A3;nc|ENSG00000163359|P12111-4|COL6A3	113.41158876095287	0.025516849225023126	1				NaN	NaN	0	NaN	45	2308	2354
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2365	12.445	NaN	1075.9	30	0	187.16	0.144	+			22939	KVQEPQGKAK	10	45	556.82568359375	NaN	0	556.82568359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVQEPQGKAK_	ENSG00000167397|ENST00000394975|VKORC1;ENST00000394971.7_1_16:31102457-31105584:-|nuORF;ENST00000394974.2_1_1:58694357-58694534:-|nuORF	41.42661286455405	0.3598046802465243	1				NaN	NaN	0	NaN	46	2317	2364
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2369	12.462	NaN	3693.8	30	0	1951.4	0.145	+			19617	KDHKEKSEF	9	41	574.2901004792138	1146.5656480252276	2	574.2905883789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KDHKEKSEF_	ENSG00000186472|ENST00000333891|PCLO;nc|ENSG00000186472|Q9Y6V0-6|PCLO;PCLO|p.E1944Sfs*8|1|0.34|ENSG00000186472|chr7:82955124-82955124|T/-|frameshift_variant;PCLO|p.K2442Sfs*2|4|0.29|ENSG00000186472|chr7:82953628-82953628|T/-|frameshift_variant;PCLO|p.K3621Ifs*26|1|0.04|ENSG00000186472|chr7:82949726-82949727|-/CCAGATA|frameshift_variant;PCLO|p.K4306Gfs*8|1|0.04|ENSG00000186472|chr7:82915067-82915070|TTTT/-|frameshift_variant;PCLO|p.M3036Tfs*24|1|0.06|ENSG00000186472|chr7:82951481-82951482|-/G|frameshift_variant;PCLO|p.N4248Kfs*31|1|0.28|ENSG00000186472|chr7:82915242-82915243|-/T|frameshift_variant;PCLO|p.P2408Lfs*36|1|0.44|ENSG00000186472|chr7:82953730-82953730|G/-|frameshift_variant;PCLO|p.Q3062Tfs*25|1|0.2|ENSG00000186472|chr7:82951405-82951406|-/G|frameshift_variant;PCLO|p.S1913Vfs*9|1|0.32|ENSG00000186472|chr7:82955216-82955216|T/-|frameshift_variant;PCLO|p.T3933Nfs*47|1|0.06|ENSG00000186472|chr7:82916188-82916189|-/T|frameshift_variant;PCLO|p.T5069Qfs*20|1|0.11|ENSG00000186472|chr7:82760722-82760722|T/-|frameshift_variant;PCLO|p.V1883Ffs*29|1|0.09|ENSG00000186472|chr7:82955307-82955307|T/-|frameshift_variant;PCLO|p.Y3007Lfs*2|1|0.28|ENSG00000186472|chr7:82951935-82951936|-/A|frameshift_variant	52.936696900407355	0.27249468807391813	1				NaN	NaN	0	NaN	47	2320	2368
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2373	12.479	NaN	3422.6	30	0	949.92	0.144	+			38817	SSNDKVIKK	9	53	509.7983059038539	1017.5820588745078	2	509.79815673828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSNDKVIKK_	ALDH3A1|p.P445Rfs*6|4|0.31|ENSG00000108602|chr17:19738336-19738336|G/-|frameshift_variant;ENSG00000108602|ENST00000225740|ALDH3A1;ENST00000479677.6_1_17:19641536-19646703:-|nuORF	85.86182877749512	0.07653218437724067	1				NaN	NaN	0	NaN	48	2323	2372
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2379	12.497	NaN	4572.3	30	0	2690.1	0.214			+	-1	MRLHDVKQ	8	44	521.7776755795596	1041.5407982259192	2	521.7774658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))RLHDVKQ_	REV__ENSG00000115841|ENST00000354545|RMDN2;REV__ENST00000440353.5_1_2:38177721-38224681:+|nuORF;REV__nc|ENSG00000115841|Q96LZ7-2|RMDN2;REV__nc|ENSG00000115841|Q96LZ7-3|RMDN2;REV__nc|ENSG00000115841|Q96LZ7-4|RMDN2;REV__RMDN2|p.F331Efs*33|1|0.12|ENSG00000115841|chr2:37997459-37997462|TGTT/-|frameshift_variant	32.81241826257853	0.7059802730411993	1				NaN	NaN	0	NaN	51	2326	2378
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2380	12.501	NaN	1543.4	30	0	250.13	0.033	+			44288	TSAPAAKPK	9	39	435.7556919972363	869.4968310612726	2	435.7554626464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TSAPAAKPK_	ENSG00000189060|ENST00000340857|H1-0	56.72105179125745	0.24094814563026265	1				NaN	NaN	0	NaN	52	2326	2378
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2384	12.515	NaN	1049.6	30	0	109.63	0.214				-1	LLLLLLLL	8	46	483.3523163557638	NaN	0	483.26666259765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LLLLLLLL_	ADAM33|p.A455Pfs*14|1|0.31|ENSG00000149451|chr20:3672575-3672575|C/-|frameshift_variant;ADAM33|p.A455Pfs*14|1|0.31|ENSG00000149451|chr20:3672575-3672575|C/-|frameshift_variant;ADAM33|p.A455Pfs*14|1|0.31|ENSG00000149451|chr20:3672575-3672575|C/-|frameshift_variant;ADAMTS2|p.D535Gfs*13|1|0.23|ENSG00000087116|chr5:179152171-179152172|-/G|frameshift_variant;ADAMTS2|p.H646Pfs*31|1|0.46|ENSG00000087116|chr5:179137783-179137784|-/G|frameshift_variant;ADAMTS2|p.L1140Pfs*24|1|0.29|ENSG00000087116|chr5:179114084-179114085|-/G|frameshift_variant;ADAMTS2|p.L1140Wfs*22|1|0.07|ENSG00000087116|chr5:179114085-179114085|G/-|frameshift_variant;ADAMTS2|p.L534Wfs*20|2|0.31|ENSG00000087116|chr5:179152172-179152172|G/-|frameshift_variant;ADAMTS2|p.R598Pfs*24|1|0.33|ENSG00000087116|chr5:179137929-179137930|-/C|frameshift_variant;ADAMTS2|p.V1075Sfs*32|1|0.38|ENSG00000087116|chr5:179114280-179114280|C/-|frameshift_variant;ADAMTS8|p.A207Pfs*38|1|0.31|ENSG00000134917|chr11:130427668-130427668|C/-|frameshift_variant;ADAMTS8|p.A207Pfs*38|1|0.31|ENSG00000134917|chr11:130427668-130427668|C/-|frameshift_variant;ATRN|p.P984Lfs*34|1|0.23|ENSG00000088812|chr20:3584079-3584079|C/-|frameshift_variant;B4GALNT4|p.G768Afs*19|1|0.14|ENSG00000182272|chr11:379512-379512|G/-|frameshift_variant;BST1|p.I219Lfs*25|1|0.46|ENSG00000109743|chr4:15715745-15715745|A/-|frameshift_variant;BTN2A2|p.C169Wfs*16|1|0.3|ENSG00000124508|chr6:26388076-26388086|GCATATCTGGA/-|frameshift_variant;BTN2A2|p.C169Wfs*16|1|0.3|ENSG00000124508|chr6:26388076-26388086|GCATATCTGGA/-|frameshift_variant;BTN2A2|p.C169Wfs*16|1|0.3|ENSG00000124508|chr6:26388076-26388086|GCATATCTGGA/-|frameshift_variant;BTN2A2|p.I493Sfs*20|1|0.29|ENSG00000124508|chr6:26392868-26392868|C/-|frameshift_variant;BTN2A2|p.I493Sfs*20|1|0.29|ENSG00000124508|chr6:26392868-26392868|C/-|frameshift_variant;BTN2A2|p.I493Sfs*20|1|0.29|ENSG00000124508|chr6:26392868-26392868|C/-|frameshift_variant;CD93|p.A315Gfs*34|1|0.31|ENSG00000125810|chr20:23085249-23085250|-/C|frameshift_variant;CD93|p.A315Gfs*34|1|0.31|ENSG00000125810|chr20:23085249-23085250|-/C|frameshift_variant;CD93|p.D280Mfs*19|1|0.29|ENSG00000125810|chr20:23085355-23085355|C/-|frameshift_variant;CD93|p.D280Mfs*19|1|0.29|ENSG00000125810|chr20:23085355-23085355|C/-|frameshift_variant;CD93|p.D482Mfs*106|1|0.47|ENSG00000125810|chr20:23084750-23084750|G/-|frameshift_variant;CD93|p.D482Mfs*106|1|0.47|ENSG00000125810|chr20:23084750-23084750|G/-|frameshift_variant;CD93|p.E121Rfs*79|5|0.37|ENSG00000125810|chr20:23085832-23085832|C/-|frameshift_variant;CD93|p.E121Rfs*79|5|0.37|ENSG00000125810|chr20:23085832-23085832|C/-|frameshift_variant;CD93|p.G58Afs*6|1|0.31|ENSG00000125810|chr20:23086020-23086020|C/-|frameshift_variant;CD93|p.G58Afs*6|1|0.31|ENSG00000125810|chr20:23086020-23086020|C/-|frameshift_variant;CELSR2-KIAA1324|1|fusion;CELSR2-KIAA1324|1|fusion;CELSR2|p.G1044Vfs*17|1|0.42|ENSG00000143126|chr1:109253206-109253206|G/-|frameshift_variant;CELSR2|p.G1044Vfs*17|1|0.42|ENSG00000143126|chr1:109253206-109253206|G/-|frameshift_variant;CELSR2|p.P2879Lfs*14|1|0.28|ENSG00000143126|chr1:109273557-109273557|C/-|frameshift_variant;CELSR2|p.P2879Lfs*14|1|0.28|ENSG00000143126|chr1:109273557-109273557|C/-|frameshift_variant;CELSR2|p.V2215Wfs*26|2|0.42|ENSG00000143126|chr1:109269115-109269115|C/-|frameshift_variant;CELSR2|p.V2215Wfs*26|2|0.42|ENSG00000143126|chr1:109269115-109269115|C/-|frameshift_variant;CNPY3|p.D276*|1|0.32|ENSG00000137161|chr6:42938772-42938773|-/C|frameshift_variant;CNPY3|p.D276*|1|0.32|ENSG00000137161|chr6:42938772-42938773|-/C|frameshift_variant;CON__ENSEMBL:ENSBTAP00000023055;CTSA|p.C331Afs*36|1|0.47|ENSG00000064601|chr20:45895029-45895029|C/-|frameshift_variant;CTSA|p.C331Afs*36|1|0.47|ENSG00000064601|chr20:45895029-45895029|C/-|frameshift_variant;CTSA|p.F173Pfs*39|1|0.09|ENSG00000064601|chr20:45892795-45892796|TT/-|frameshift_variant;CTSA|p.F173Pfs*39|1|0.09|ENSG00000064601|chr20:45892795-45892796|TT/-|frameshift_variant;CTSA|p.Y115Ifs*5|1|0.34|ENSG00000064601|chr20:45892305-45892305|C/-|frameshift_variant;CTSA|p.Y115Ifs*5|1|0.34|ENSG00000064601|chr20:45892305-45892305|C/-|frameshift_variant;CXCL16|p.A149Hfs*26|1|0.09|ENSG00000161921|chr17:4735422-4735422|C/-|frameshift_variant;CXCL16|p.A149Hfs*26|1|0.09|ENSG00000161921|chr17:4735422-4735422|C/-|frameshift_variant;CXCL16|p.Q72Rfs*46|1|0.77|ENSG00000161921|chr17:4738842-4738843|-/C|frameshift_variant;CXCL16|p.Q72Rfs*46|1|0.77|ENSG00000161921|chr17:4738842-4738843|-/C|frameshift_variant;DCHS1|p.G1030Afs*31|1|0.16|ENSG00000166341|chr11:6632423-6632423|C/-|frameshift_variant;DCHS1|p.G1030Afs*31|1|0.16|ENSG00000166341|chr11:6632423-6632423|C/-|frameshift_variant;DCHS1|p.G2765Rfs*10|1|0.26|ENSG00000166341|chr11:6623383-6623384|-/T|frameshift_variant;DCHS1|p.G2765Rfs*10|1|0.26|ENSG00000166341|chr11:6623383-6623384|-/T|frameshift_variant;DCHS1|p.H2834Sfs*7|1|0.44|ENSG00000166341|chr11:6623177-6623178|-/C|frameshift_variant;DCHS1|p.H2834Sfs*7|1|0.44|ENSG00000166341|chr11:6623177-6623178|-/C|frameshift_variant;DCHS1|p.Q374Pfs*4|1|0.4|ENSG00000166341|chr11:6640493-6640494|-/G|frameshift_variant;DCHS1|p.Q374Pfs*4|1|0.4|ENSG00000166341|chr11:6640493-6640494|-/G|frameshift_variant;DPEP2|p.R41Qfs*26|2|0.25|ENSG00000167261|chr16:67993092-67993093|-/G|frameshift_variant;EFNA4|p.R196C|1|0.12|ENSG00000243364|chr1:155068969-155068969|C/T|missense_variant;EIF2AK3|p.D965Gfs*7|1|0.04|ENSG00000172071|chr2:88570965-88570966|-/GTTTTCATTAAAATAC|frameshift_variant;EIF2AK3|p.K126Sfs*27|1|0.3|ENSG00000172071|chr2:88613785-88613785|T/-|frameshift_variant;ENSG00000001036|ENST00000002165|FUCA2;ENSG00000001036|ENST00000002165|FUCA2;ENSG00000054654|ENST00000555002|SYNE2;ENSG00000054654|ENST00000555002|SYNE2;ENSG00000064601|ENST00000646241|CTSA;ENSG00000064601|ENST00000646241|CTSA;ENSG00000070031|ENST00000176195|SCT;ENSG00000083807|ENST00000263093|SLC27A5;ENSG00000083807|ENST00000263093|SLC27A5;ENSG00000083857|ENST00000441802|FAT1;ENSG00000087116|ENST00000251582|ADAMTS2;ENSG00000088812|ENST00000262919|ATRN;ENSG00000104972|ENST00000324602|LILRB1;ENSG00000104972|ENST00000324602|LILRB1;ENSG00000109255|ENST00000264218|NMU;ENSG00000109743|ENST00000265016|BST1;ENSG00000109758|ENST00000382774|HGFAC;ENSG00000109758|ENST00000382774|HGFAC;ENSG00000109758|ENST00000382774|HGFAC;ENSG00000114554|ENST00000393409|PLXNA1;ENSG00000114554|ENST00000393409|PLXNA1;ENSG00000114554|ENST00000393409|PLXNA1;ENSG00000114554|ENST00000393409|PLXNA1;ENSG00000115155|ENST00000272371|OTOF;ENSG00000115155|ENST00000272371|OTOF;ENSG00000115155|ENST00000272371|OTOF;ENSG00000115155|ENST00000272371|OTOF;ENSG00000117899|ENST00000261758|MESD;ENSG00000121316|ENST00000240617|PLBD1;ENSG00000124508|ENST00000356709|BTN2A2;ENSG00000124508|ENST00000356709|BTN2A2;ENSG00000124508|ENST00000356709|BTN2A2;ENSG00000125810|ENST00000246006|CD93;ENSG00000125810|ENST00000246006|CD93;ENSG00000129214|ENST00000380450|SHBG;ENSG00000129214|ENST00000380450|SHBG;ENSG00000129214|ENST00000380450|SHBG;ENSG00000131042|ENST00000314446|LILRB2;ENSG00000131042|ENST00000314446|LILRB2;ENSG00000132518|ENST00000254854|GUCY2D;ENSG00000134917|ENST00000257359|ADAMTS8;ENSG00000134917|ENST00000257359|ADAMTS8;ENSG00000135077|ENST00000307851|HAVCR2;ENSG00000137161|ENST00000372836|CNPY3;ENSG00000137161|ENST00000372836|CNPY3;ENSG00000141096|ENST00000268793|DPEP3;ENSG00000141096|ENST00000268793|DPEP3;ENSG00000141096|ENST00000268793|DPEP3;ENSG00000142538|ENST00000270631|PTH2;ENSG00000142538|ENST00000270631|PTH2;ENSG00000143126|ENST00000271332|CELSR2;ENSG00000143126|ENST00000271332|CELSR2;ENSG00000143434|ENST00000368914|SEMA6C;ENSG00000149451|ENST00000356518|ADAM33;ENSG00000149451|ENST00000356518|ADAM33;ENSG00000149451|ENST00000356518|ADAM33;ENSG00000150893|ENST00000280481|FREM2;ENSG00000150893|ENST00000280481|FREM2;ENSG00000155093|ENST00000389418|PTPRN2;ENSG00000155093|ENST00000389418|PTPRN2;ENSG00000157193|ENST00000306052|LRP8;ENSG00000157193|ENST00000306052|LRP8;ENSG00000157193|ENST00000306052|LRP8;ENSG00000157193|ENST00000306052|LRP8;ENSG00000159189|ENST00000374640|C1QC;ENSG00000161610|ENST00000293330|HCRT;ENSG00000161921|ENST00000293778|CXCL16;ENSG00000161921|ENST00000293778|CXCL16;ENSG00000162337|ENST00000294304|LRP5;ENSG00000162337|ENST00000294304|LRP5;ENSG00000164897|ENST00000297533|TMUB1;ENSG00000164897|ENST00000297533|TMUB1;ENSG00000165905|ENST00000401752|LARGE2;ENSG00000166341|ENST00000299441|DCHS1;ENSG00000166341|ENST00000299441|DCHS1;ENSG00000167261|ENST00000393847|DPEP2;ENSG00000167680|ENST00000586582|SEMA6B;ENSG00000167925|ENST00000587427|GHDC;ENSG00000168056|ENST00000301873|LTBP3;ENSG00000168056|ENST00000301873|LTBP3;ENSG00000168056|ENST00000301873|LTBP3;ENSG00000169174|ENST00000302118|PCSK9;ENSG00000169174|ENST00000302118|PCSK9;ENSG00000172071|ENST00000303236|EIF2AK3;ENSG00000173714|ENST00000311378|WFIKKN2;ENSG00000178473|ENST00000380433|UCN3;ENSG00000181790|ENST00000517894|ADGRB1;ENSG00000182272|ENST00000329962|B4GALNT4;ENSG00000182578|ENST00000675795|CSF1R;ENSG00000182578|ENST00000675795|CSF1R;ENSG00000182578|ENST00000675795|CSF1R;ENSG00000182685|ENST00000328540|BRICD5;ENSG00000183971|ENST00000566435|NPW;ENSG00000184709|ENST00000371542|LRRC26;ENSG00000184985|ENST00000507866|SORCS2;ENSG00000184992|ENST00000341446|BRI3BP;ENSG00000184992|ENST00000341446|BRI3BP;ENSG00000184992|ENST00000341446|BRI3BP;ENSG00000184992|ENST00000341446|BRI3BP;ENSG00000185033|ENST00000411539|SEMA4B;ENSG00000185033|ENST00000411539|SEMA4B;ENSG00000185033|ENST00000411539|SEMA4B;ENSG00000185033|ENST00000411539|SEMA4B;ENSG00000185245|ENST00000329125|GP1BA;ENSG00000185896|ENST00000332556|LAMP1;ENSG00000185896|ENST00000332556|LAMP1;ENSG00000185896|ENST00000332556|LAMP1;ENSG00000204301|ENST00000375023|NOTCH4;ENSG00000204301|ENST00000375023|NOTCH4;ENSG00000204301|ENST00000375023|NOTCH4;ENSG00000204301|ENST00000375023|NOTCH4;ENSG00000204583|ENST00000376608|LRCOL1;ENSG00000204583|ENST00000376608|LRCOL1;ENSG00000204583|ENST00000376608|LRCOL1;ENSG00000204583|ENST00000376608|LRCOL1;ENSG00000204962|ENST00000531613|PCDHA8;ENSG00000204967|ENST00000530339|PCDHA4;ENSG00000215644|ENST00000400723|GCGR;ENSG00000242866|ENST00000450892|STRC;ENSG00000242866|ENST00000450892|STRC;ENSG00000242866|ENST00000450892|STRC;ENSG00000242866|ENST00000450892|STRC;ENSG00000243232|ENST00000289269|PCDHAC2;ENSG00000243232|ENST00000289269|PCDHAC2;ENSG00000243364|ENST00000368409|EFNA4;ENSG00000283654|ENST00000637218|CIROP;ENSG00000283654|ENST00000637218|CIROP;ENSG00000283654|ENST00000637218|CIROP;ENST00000268795.5_1_16:68025981-68027124:-|nuORF;ENST00000293778.10_2_17:4636851-4637124:-|nuORF;ENST00000293778.10_2_17:4636851-4637124:-|nuORF;ENST00000293778.10_2_17:4636851-4637124:-|nuORF;ENST00000293778.10_2_17:4636851-4637124:-|nuORF;ENST00000293778.10_2_17:4636851-4637124:-|nuORF;ENST00000323180.10_1_11:46105825-46142581:-|nuORF;ENST00000323180.10_1_11:46105825-46142581:-|nuORF;ENST00000323180.10_1_11:46105825-46142581:-|nuORF;ENST00000344924.7_1_7:134331590-134346213:+|nuORF;ENST00000367585.1_1_6:143823176-143832783:-|nuORF;ENST00000367585.1_1_6:143823176-143832783:-|nuORF;ENST00000369603.9_1_10:112063289-112064608:-|nuORF;ENST00000393132.2_1_7:134331590-134343135:+|nuORF;ENST00000394768.6_2_14:64542710-64692241:+|nuORF;ENST00000394768.6_2_14:64542710-64692241:+|nuORF;ENST00000395811.9_1_17:17088208-17088493:+|nuORF;ENST00000395811.9_1_17:17088208-17088493:+|nuORF;ENST00000395811.9_1_17:17088208-17088493:+|nuORF;ENST00000396904.2_2_7:5097383-5112677:+|nuORF;ENST00000413911.1_1_2:191745560-191746172:-|nuORF;ENST00000413911.1_1_2:191745560-191746172:-|nuORF;ENST00000413911.1_1_2:191745560-191746172:-|nuORF;ENST00000413911.1_1_2:191745560-191746172:-|nuORF;ENST00000413911.1_1_2:191745560-191746172:-|nuORF;ENST00000413911.1_1_2:191745560-191746172:-|nuORF;ENST00000413911.1_1_2:191745560-191746172:-|nuORF;ENST00000413911.1_1_2:191745560-191746172:-|nuORF;ENST00000418040.5_1_7:134331590-134346220:+|nuORF;ENST00000462628.5_1_19:55146093-55147330:+|nuORF;ENST00000462628.5_1_19:55146093-55147330:+|nuORF;ENST00000467485.5_1_6:26384034-26390495:+|nuORF;ENST00000467485.5_1_6:26384034-26390495:+|nuORF;ENST00000467485.5_1_6:26384034-26390495:+|nuORF;ENST00000476805.2_1_2:64977750-64977942:-|nuORF;ENST00000476805.2_1_2:64977750-64977942:-|nuORF;ENST00000482636.1_1_6:26384034-26385742:+|nuORF;ENST00000482636.1_1_6:26384034-26385742:+|nuORF;ENST00000482636.1_1_6:26384034-26385742:+|nuORF;ENST00000498308.1_1_7:5111828-5112677:+|nuORF;ENST00000522399.1_1_1:231090115-231114586:-|nuORF;ENST00000522902.1_1_5:156533605-156536090:-|nuORF;ENST00000529734.5_1_11:46105847-46142581:-|nuORF;ENST00000529734.5_1_11:46105847-46142581:-|nuORF;ENST00000529734.5_1_11:46105847-46142581:-|nuORF;ENST00000530312.1_1_11:46142070-46142581:-|nuORF;ENST00000530312.1_1_11:46142070-46142581:-|nuORF;ENST00000530312.1_1_11:46142070-46142581:-|nuORF;ENST00000530717.1_1_11:369803-372772:+|nuORF;ENST00000532883.5_1_11:46112101-46142581:-|nuORF;ENST00000532883.5_1_11:46112101-46142581:-|nuORF;ENST00000532883.5_1_11:46112101-46142581:-|nuORF;ENST00000536100.1_1_12:133182714-133186967:-|nuORF;ENST00000536100.1_1_12:133182714-133186967:-|nuORF;ENST00000536100.1_1_12:133182714-133186967:-|nuORF;ENST00000536100.1_1_12:133182714-133186967:-|nuORF;ENST00000554805.6_2_14:64676062-64692241:+|nuORF;ENST00000554805.6_2_14:64676062-64692241:+|nuORF;ENST00000555022.5_2_14:64671104-64692241:+|nuORF;ENST00000555022.5_2_14:64671104-64692241:+|nuORF;ENST00000565192.1_1_6:31022106-31024293:+|nuORF;FAT1|p.G2934Vfs*3|2|0.37|ENSG00000083857|chr4:186617787-186617787|T/-|frameshift_variant;FAT1|p.K1225Nfs*9|1|0.03|ENSG00000083857|chr4:186636885-186636885|G/-|frameshift_variant;FAT1|p.N3847Yfs*7|1|0.03|ENSG00000083857|chr4:186601370-186601371|-/TTATA|frameshift_variant;FAT1|p.P3228Lfs*42|1|0.27|ENSG00000083857|chr4:186611556-186611556|G/-|frameshift_variant;FAT1|p.P4313Lfs*36|1|0.34|ENSG00000083857|chr4:186596602-186596602|G/-|frameshift_variant;FAT1|p.Q2933Hfs*14|1|0.33|ENSG00000083857|chr4:186617787-186617788|-/G|frameshift_variant;FAT1|p.T1364Yfs*8|1|0.23|ENSG00000083857|chr4:186636118-186636119|-/A|frameshift_variant;FAT1|p.V1878Cfs*8|2|0.22|ENSG00000083857|chr4:186620955-186620956|-/G|frameshift_variant;FREM2|p.F2459Lfs*27|1|0.21|ENSG00000150893|chr13:38859443-38859443|T/-|frameshift_variant;FREM2|p.F2459Lfs*27|1|0.21|ENSG00000150893|chr13:38859443-38859443|T/-|frameshift_variant;FREM2|p.V1156Gfs*14|1|0.4|ENSG00000150893|chr13:38690806-38690807|-/G|frameshift_variant;FREM2|p.V1156Gfs*14|1|0.4|ENSG00000150893|chr13:38690806-38690807|-/G|frameshift_variant;FUCA2|p.I367Mfs*27|1|0.31|ENSG00000001036|chr6:143501982-143501985|ATAA/-|frameshift_variant;FUCA2|p.I367Mfs*27|1|0.31|ENSG00000001036|chr6:143501982-143501985|ATAA/-|frameshift_variant;GHDC|p.P5S|1|0.62|ENSG00000167925|chr17:42193569-42193569|G/A|missense_variant;GHDC|p.T92Lfs*94|1|0.04|ENSG00000167925|chr17:42193019-42193020|-/AATCTAG|frameshift_variant;GP1BA|p.F208Lfs*48|1|0.24|ENSG00000185245|chr17:4933223-4933223|T/-|frameshift_variant;GP1BA|p.L531Wfs*22|1|0.36|ENSG00000185245|chr17:4934191-4934191|C/-|frameshift_variant;GP1BA|p.S420Afs*52|1|0.4|ENSG00000185245|chr17:4933857-4933857|C/-|frameshift_variant;GP1BA|p.T494Pfs*59|1|0.4|ENSG00000185245|chr17:4934078-4934078|A/-|frameshift_variant;HAVCR2|p.D92Efs*4|1|0.43|ENSG00000135077|chr5:157106745-157106745|A/-|frameshift_variant;HAVCR2|p.Y35Ifs*41|1|0.23|ENSG00000135077|chr5:157106919-157106919|G/-|frameshift_variant;HGFAC|p.R190Gfs*57|1|0.54|ENSG00000109758|chr4:3444127-3444127|C/-|frameshift_variant;HGFAC|p.R190Gfs*57|1|0.54|ENSG00000109758|chr4:3444127-3444127|C/-|frameshift_variant;HGFAC|p.R190Gfs*57|1|0.54|ENSG00000109758|chr4:3444127-3444127|C/-|frameshift_variant;LRP5|p.A1277Pfs*162|1|0.14|ENSG00000162337|chr11:68433664-68433664|G/-|frameshift_variant;LRP5|p.A1277Pfs*162|1|0.14|ENSG00000162337|chr11:68433664-68433664|G/-|frameshift_variant;LRP5|p.D1065Gfs*73|1|0.31|ENSG00000162337|chr11:68423650-68423651|-/G|frameshift_variant;LRP5|p.D1065Gfs*73|1|0.31|ENSG00000162337|chr11:68423650-68423651|-/G|frameshift_variant;LTBP3|p.D596*|1|0.24|ENSG00000168056|chr11:65547981-65547982|-/G|frameshift_variant;LTBP3|p.D596*|1|0.24|ENSG00000168056|chr11:65547981-65547982|-/G|frameshift_variant;LTBP3|p.D596*|1|0.24|ENSG00000168056|chr11:65547981-65547982|-/G|frameshift_variant;LTBP3|p.L294Sfs*94|1|0.48|ENSG00000168056|chr11:65553515-65553515|G/-|frameshift_variant;LTBP3|p.L294Sfs*94|1|0.48|ENSG00000168056|chr11:65553515-65553515|G/-|frameshift_variant;LTBP3|p.L294Sfs*94|1|0.48|ENSG00000168056|chr11:65553515-65553515|G/-|frameshift_variant;nc|ENSG00000001036|Q9BTY2-2|FUCA2;nc|ENSG00000001036|Q9BTY2-2|FUCA2;nc|ENSG00000054654|Q8WXH0-10|SYNE2;nc|ENSG00000054654|Q8WXH0-10|SYNE2;nc|ENSG00000054654|Q8WXH0-11|SYNE2;nc|ENSG00000054654|Q8WXH0-11|SYNE2;nc|ENSG00000054654|Q8WXH0-12|SYNE2;nc|ENSG00000054654|Q8WXH0-12|SYNE2;nc|ENSG00000054654|Q8WXH0-13|SYNE2;nc|ENSG00000054654|Q8WXH0-13|SYNE2;nc|ENSG00000054654|Q8WXH0-3|SYNE2;nc|ENSG00000054654|Q8WXH0-3|SYNE2;nc|ENSG00000054654|Q8WXH0-4|SYNE2;nc|ENSG00000054654|Q8WXH0-4|SYNE2;nc|ENSG00000054654|Q8WXH0-5|SYNE2;nc|ENSG00000054654|Q8WXH0-5|SYNE2;nc|ENSG00000054654|Q8WXH0-6|SYNE2;nc|ENSG00000054654|Q8WXH0-6|SYNE2;nc|ENSG00000054654|Q8WXH0-7|SYNE2;nc|ENSG00000054654|Q8WXH0-7|SYNE2;nc|ENSG00000054654|Q8WXH0|SYNE2;nc|ENSG00000054654|Q8WXH0|SYNE2;nc|ENSG00000064601|P10619-2|CTSA;nc|ENSG00000064601|P10619-2|CTSA;nc|ENSG00000083807|Q9Y2P5-2|SLC27A5;nc|ENSG00000083807|Q9Y2P5-2|SLC27A5;nc|ENSG00000087116|O95450-2|ADAMTS2;nc|ENSG00000088812|O75882-2|ATRN;nc|ENSG00000104972|Q8NHL6-2|LILRB1;nc|ENSG00000104972|Q8NHL6-2|LILRB1;nc|ENSG00000104972|Q8NHL6-3|LILRB1;nc|ENSG00000104972|Q8NHL6-3|LILRB1;nc|ENSG00000104972|Q8NHL6-4|LILRB1;nc|ENSG00000104972|Q8NHL6-4|LILRB1;nc|ENSG00000104972|Q8NHL6|LILRB1;nc|ENSG00000104972|Q8NHL6|LILRB1;nc|ENSG00000115155|Q9HC10-3|OTOF;nc|ENSG00000115155|Q9HC10-3|OTOF;nc|ENSG00000115155|Q9HC10-3|OTOF;nc|ENSG00000115155|Q9HC10-3|OTOF;nc|ENSG00000115155|Q9HC10-4|OTOF;nc|ENSG00000115155|Q9HC10-4|OTOF;nc|ENSG00000115155|Q9HC10-4|OTOF;nc|ENSG00000115155|Q9HC10-4|OTOF;nc|ENSG00000117899|Q14696-2|MESD;nc|ENSG00000124508|Q8WVV5-2|BTN2A2;nc|ENSG00000124508|Q8WVV5-2|BTN2A2;nc|ENSG00000124508|Q8WVV5-2|BTN2A2;nc|ENSG00000124508|Q8WVV5-3|BTN2A2;nc|ENSG00000124508|Q8WVV5-3|BTN2A2;nc|ENSG00000124508|Q8WVV5-3|BTN2A2;nc|ENSG00000124508|Q8WVV5-4|BTN2A2;nc|ENSG00000124508|Q8WVV5-4|BTN2A2;nc|ENSG00000124508|Q8WVV5-4|BTN2A2;nc|ENSG00000124508|Q8WVV5-5|BTN2A2;nc|ENSG00000124508|Q8WVV5-5|BTN2A2;nc|ENSG00000124508|Q8WVV5-5|BTN2A2;nc|ENSG00000129214|P04278-3|SHBG;nc|ENSG00000129214|P04278-3|SHBG;nc|ENSG00000129214|P04278-3|SHBG;nc|ENSG00000129214|P04278-4|SHBG;nc|ENSG00000129214|P04278-4|SHBG;nc|ENSG00000129214|P04278-4|SHBG;nc|ENSG00000129214|P04278-5|SHBG;nc|ENSG00000129214|P04278-5|SHBG;nc|ENSG00000129214|P04278-5|SHBG;nc|ENSG00000131042|Q8N423-1|LILRB2;nc|ENSG00000131042|Q8N423-1|LILRB2;nc|ENSG00000131042|Q8N423-3|LILRB2;nc|ENSG00000131042|Q8N423-3|LILRB2;nc|ENSG00000131042|Q8N423-4|LILRB2;nc|ENSG00000131042|Q8N423-4|LILRB2;nc|ENSG00000135077|Q8TDQ0-2|HAVCR2;nc|ENSG00000137161|Q9BT09-2|CNPY3;nc|ENSG00000137161|Q9BT09-2|CNPY3;nc|ENSG00000143434|Q9H3T2-2|SEMA6C;nc|ENSG00000143434|Q9H3T2-3|SEMA6C;nc|ENSG00000149451|Q9BZ11-2|ADAM33;nc|ENSG00000149451|Q9BZ11-2|ADAM33;nc|ENSG00000149451|Q9BZ11-2|ADAM33;nc|ENSG00000150893|Q5SZK8-2|FREM2;nc|ENSG00000150893|Q5SZK8-2|FREM2;nc|ENSG00000155093|Q92932-2|PTPRN2;nc|ENSG00000155093|Q92932-2|PTPRN2;nc|ENSG00000155093|Q92932-4|PTPRN2;nc|ENSG00000155093|Q92932-4|PTPRN2;nc|ENSG00000157193|Q14114-2|LRP8;nc|ENSG00000157193|Q14114-2|LRP8;nc|ENSG00000157193|Q14114-2|LRP8;nc|ENSG00000157193|Q14114-2|LRP8;nc|ENSG00000157193|Q14114-3|LRP8;nc|ENSG00000157193|Q14114-3|LRP8;nc|ENSG00000157193|Q14114-3|LRP8;nc|ENSG00000157193|Q14114-3|LRP8;nc|ENSG00000157193|Q14114-4|LRP8;nc|ENSG00000157193|Q14114-4|LRP8;nc|ENSG00000157193|Q14114-4|LRP8;nc|ENSG00000157193|Q14114-4|LRP8;nc|ENSG00000167261|Q9H4A9-2|DPEP2;nc|ENSG00000167261|Q9H4A9-3|DPEP2;nc|ENSG00000167680|Q9H3T3-3|SEMA6B;nc|ENSG00000167925|Q8N2G8-2|GHDC;nc|ENSG00000167925|Q8N2G8-3|GHDC;nc|ENSG00000168056|Q9NS15-2|LTBP3;nc|ENSG00000168056|Q9NS15-2|LTBP3;nc|ENSG00000168056|Q9NS15-2|LTBP3;nc|ENSG00000182685|Q6PL45|BRICD5;nc|ENSG00000185033|Q9NPR2-2|SEMA4B;nc|ENSG00000185033|Q9NPR2-2|SEMA4B;nc|ENSG00000185033|Q9NPR2-2|SEMA4B;nc|ENSG00000185033|Q9NPR2-2|SEMA4B;nc|ENSG00000185896|P11279-2|LAMP1;nc|ENSG00000185896|P11279-2|LAMP1;nc|ENSG00000185896|P11279-2|LAMP1;nc|ENSG00000204301|Q99466-3|NOTCH4;nc|ENSG00000204301|Q99466-3|NOTCH4;nc|ENSG00000204301|Q99466-3|NOTCH4;nc|ENSG00000204301|Q99466-3|NOTCH4;nc|ENSG00000204962|Q9Y5H6-2|PCDHA8;nc|ENSG00000204967|Q9UN74-2|PCDHA4;nc|ENSG00000213402|Q14761|PTPRCAP;nc|ENSG00000213402|Q14761|PTPRCAP;nc|ENSG00000228789|E2RYF7|HCG22;nc|ENSG00000243232|Q9Y5I4-2|PCDHAC2;nc|ENSG00000243232|Q9Y5I4-2|PCDHAC2;nc|ENSG00000283654|A0A1B0GTW7-2|CIROP;nc|ENSG00000283654|A0A1B0GTW7-2|CIROP;nc|ENSG00000283654|A0A1B0GTW7-2|CIROP;nc|ENSG00000283654|A0A1B0GTW7-3|CIROP;nc|ENSG00000283654|A0A1B0GTW7-3|CIROP;nc|ENSG00000283654|A0A1B0GTW7-3|CIROP;nc|ENSG00000283706|Q9UI38|PRSS50;nc|ENSG00000290691|A6NGW2|STRCP1;nc|ENSG00000290691|A6NGW2|STRCP1;nc|ENSG00000290691|A6NGW2|STRCP1;nc|ENSG00000290691|A6NGW2|STRCP1;NOTCH4|p.G1154Afs*150|2|0.09|ENSG00000204301|chr6:32202370-32202370|C/-|frameshift_variant;NOTCH4|p.G1154Afs*150|2|0.09|ENSG00000204301|chr6:32202370-32202370|C/-|frameshift_variant;NOTCH4|p.G1154Afs*150|2|0.09|ENSG00000204301|chr6:32202370-32202370|C/-|frameshift_variant;NOTCH4|p.G1154Afs*150|2|0.09|ENSG00000204301|chr6:32202370-32202370|C/-|frameshift_variant;NOTCH4|p.P1441Lfs*17|1|0.22|ENSG00000204301|chr6:32199139-32199139|G/-|frameshift_variant;NOTCH4|p.P1441Lfs*17|1|0.22|ENSG00000204301|chr6:32199139-32199139|G/-|frameshift_variant;NOTCH4|p.P1441Lfs*17|1|0.22|ENSG00000204301|chr6:32199139-32199139|G/-|frameshift_variant;NOTCH4|p.P1441Lfs*17|1|0.22|ENSG00000204301|chr6:32199139-32199139|G/-|frameshift_variant;NOTCH4|p.T705Dfs*23|1|0.1|ENSG00000204301|chr6:32214164-32214165|-/C|frameshift_variant;NOTCH4|p.T705Dfs*23|1|0.1|ENSG00000204301|chr6:32214164-32214165|-/C|frameshift_variant;NOTCH4|p.T705Dfs*23|1|0.1|ENSG00000204301|chr6:32214164-32214165|-/C|frameshift_variant;NOTCH4|p.T705Dfs*23|1|0.1|ENSG00000204301|chr6:32214164-32214165|-/C|frameshift_variant;PCDHA12|p.S17L|1|0.13|ENSG00000251664|chr5:140875522-140875522|C/T|missense_variant;PCDHAC2|p.Y622Lfs*8|1|0.23|ENSG00000243232|chr5:140968624-140968625|-/T|frameshift_variant;PCDHAC2|p.Y622Lfs*8|1|0.23|ENSG00000243232|chr5:140968624-140968625|-/T|frameshift_variant;PLBD1|p.N214Tfs*4|1|0.06|ENSG00000121316|chr12:14536628-14536628|T/-|frameshift_variant;PLXNA1|p.G417Afs*18|1|0.28|ENSG00000114554|chr3:126991434-126991434|G/-|frameshift_variant;PLXNA1|p.G417Afs*18|1|0.28|ENSG00000114554|chr3:126991434-126991434|G/-|frameshift_variant;PLXNA1|p.G417Afs*18|1|0.28|ENSG00000114554|chr3:126991434-126991434|G/-|frameshift_variant;PLXNA1|p.G417Afs*18|1|0.28|ENSG00000114554|chr3:126991434-126991434|G/-|frameshift_variant;PLXNA1|p.Q1019Rfs*22|3|0.36|ENSG00000114554|chr3:127016548-127016548|C/-|frameshift_variant;PLXNA1|p.Q1019Rfs*22|3|0.36|ENSG00000114554|chr3:127016548-127016548|C/-|frameshift_variant;PLXNA1|p.Q1019Rfs*22|3|0.36|ENSG00000114554|chr3:127016548-127016548|C/-|frameshift_variant;PLXNA1|p.Q1019Rfs*22|3|0.36|ENSG00000114554|chr3:127016548-127016548|C/-|frameshift_variant;PTPRN2|p.Q286Pfs*35|1|0.14|ENSG00000155093|chr7:158166984-158166985|-/G|frameshift_variant;PTPRN2|p.Q286Pfs*35|1|0.14|ENSG00000155093|chr7:158166984-158166985|-/G|frameshift_variant;REV__ADAM33|p.A455Pfs*14|1|0.31|ENSG00000149451|chr20:3672575-3672575|C/-|frameshift_variant;REV__ADAM33|p.A455Pfs*14|1|0.31|ENSG00000149451|chr20:3672575-3672575|C/-|frameshift_variant;REV__ADAM33|p.A455Pfs*14|1|0.31|ENSG00000149451|chr20:3672575-3672575|C/-|frameshift_variant;REV__ADAMTS2|p.D535Gfs*13|1|0.23|ENSG00000087116|chr5:179152171-179152172|-/G|frameshift_variant;REV__ADAMTS2|p.H646Pfs*31|1|0.46|ENSG00000087116|chr5:179137783-179137784|-/G|frameshift_variant;REV__ADAMTS2|p.L1140Pfs*24|1|0.29|ENSG00000087116|chr5:179114084-179114085|-/G|frameshift_variant;REV__ADAMTS2|p.L1140Wfs*22|1|0.07|ENSG00000087116|chr5:179114085-179114085|G/-|frameshift_variant;REV__ADAMTS2|p.L534Wfs*20|2|0.31|ENSG00000087116|chr5:179152172-179152172|G/-|frameshift_variant;REV__ADAMTS2|p.R598Pfs*24|1|0.33|ENSG00000087116|chr5:179137929-179137930|-/C|frameshift_variant;REV__ADAMTS2|p.V1075Sfs*32|1|0.38|ENSG00000087116|chr5:179114280-179114280|C/-|frameshift_variant;REV__ADAMTS8|p.A207Pfs*38|1|0.31|ENSG00000134917|chr11:130427668-130427668|C/-|frameshift_variant;REV__ADAMTS8|p.A207Pfs*38|1|0.31|ENSG00000134917|chr11:130427668-130427668|C/-|frameshift_variant;REV__ATRN|p.P984Lfs*34|1|0.23|ENSG00000088812|chr20:3584079-3584079|C/-|frameshift_variant;REV__B4GALNT4|p.G768Afs*19|1|0.14|ENSG00000182272|chr11:379512-379512|G/-|frameshift_variant;REV__BST1|p.I219Lfs*25|1|0.46|ENSG00000109743|chr4:15715745-15715745|A/-|frameshift_variant;REV__BTN2A2|p.C169Wfs*16|1|0.3|ENSG00000124508|chr6:26388076-26388086|GCATATCTGGA/-|frameshift_variant;REV__BTN2A2|p.C169Wfs*16|1|0.3|ENSG00000124508|chr6:26388076-26388086|GCATATCTGGA/-|frameshift_variant;REV__BTN2A2|p.C169Wfs*16|1|0.3|ENSG00000124508|chr6:26388076-26388086|GCATATCTGGA/-|frameshift_variant;REV__BTN2A2|p.I493Sfs*20|1|0.29|ENSG00000124508|chr6:26392868-26392868|C/-|frameshift_variant;REV__BTN2A2|p.I493Sfs*20|1|0.29|ENSG00000124508|chr6:26392868-26392868|C/-|frameshift_variant;REV__BTN2A2|p.I493Sfs*20|1|0.29|ENSG00000124508|chr6:26392868-26392868|C/-|frameshift_variant;REV__CD93|p.A315Gfs*34|1|0.31|ENSG00000125810|chr20:23085249-23085250|-/C|frameshift_variant;REV__CD93|p.A315Gfs*34|1|0.31|ENSG00000125810|chr20:23085249-23085250|-/C|frameshift_variant;REV__CD93|p.D280Mfs*19|1|0.29|ENSG00000125810|chr20:23085355-23085355|C/-|frameshift_variant;REV__CD93|p.D280Mfs*19|1|0.29|ENSG00000125810|chr20:23085355-23085355|C/-|frameshift_variant;REV__CD93|p.D482Mfs*106|1|0.47|ENSG00000125810|chr20:23084750-23084750|G/-|frameshift_variant;REV__CD93|p.D482Mfs*106|1|0.47|ENSG00000125810|chr20:23084750-23084750|G/-|frameshift_variant;REV__CD93|p.E121Rfs*79|5|0.37|ENSG00000125810|chr20:23085832-23085832|C/-|frameshift_variant;REV__CD93|p.E121Rfs*79|5|0.37|ENSG00000125810|chr20:23085832-23085832|C/-|frameshift_variant;REV__CD93|p.G58Afs*6|1|0.31|ENSG00000125810|chr20:23086020-23086020|C/-|frameshift_variant;REV__CD93|p.G58Afs*6|1|0.31|ENSG00000125810|chr20:23086020-23086020|C/-|frameshift_variant;REV__CELSR2-KIAA1324|1|fusion;REV__CELSR2-KIAA1324|1|fusion;REV__CELSR2|p.G1044Vfs*17|1|0.42|ENSG00000143126|chr1:109253206-109253206|G/-|frameshift_variant;REV__CELSR2|p.G1044Vfs*17|1|0.42|ENSG00000143126|chr1:109253206-109253206|G/-|frameshift_variant;REV__CELSR2|p.P2879Lfs*14|1|0.28|ENSG00000143126|chr1:109273557-109273557|C/-|frameshift_variant;REV__CELSR2|p.P2879Lfs*14|1|0.28|ENSG00000143126|chr1:109273557-109273557|C/-|frameshift_variant;REV__CELSR2|p.V2215Wfs*26|2|0.42|ENSG00000143126|chr1:109269115-109269115|C/-|frameshift_variant;REV__CELSR2|p.V2215Wfs*26|2|0.42|ENSG00000143126|chr1:109269115-109269115|C/-|frameshift_variant;REV__CNPY3|p.D276*|1|0.32|ENSG00000137161|chr6:42938772-42938773|-/C|frameshift_variant;REV__CNPY3|p.D276*|1|0.32|ENSG00000137161|chr6:42938772-42938773|-/C|frameshift_variant;REV__CON__ENSEMBL:ENSBTAP00000023055;REV__CTSA|p.C331Afs*36|1|0.47|ENSG00000064601|chr20:45895029-45895029|C/-|frameshift_variant;REV__CTSA|p.C331Afs*36|1|0.47|ENSG00000064601|chr20:45895029-45895029|C/-|frameshift_variant;REV__CTSA|p.F173Pfs*39|1|0.09|ENSG00000064601|chr20:45892795-45892796|TT/-|frameshift_variant;REV__CTSA|p.F173Pfs*39|1|0.09|ENSG00000064601|chr20:45892795-45892796|TT/-|frameshift_variant;REV__CTSA|p.Y115Ifs*5|1|0.34|ENSG00000064601|chr20:45892305-45892305|C/-|frameshift_variant;REV__CTSA|p.Y115Ifs*5|1|0.34|ENSG00000064601|chr20:45892305-45892305|C/-|frameshift_variant;REV__CXCL16|p.A149Hfs*26|1|0.09|ENSG00000161921|chr17:4735422-4735422|C/-|frameshift_variant;REV__CXCL16|p.A149Hfs*26|1|0.09|ENSG00000161921|chr17:4735422-4735422|C/-|frameshift_variant;REV__CXCL16|p.Q72Rfs*46|1|0.77|ENSG00000161921|chr17:4738842-4738843|-/C|frameshift_variant;REV__CXCL16|p.Q72Rfs*46|1|0.77|ENSG00000161921|chr17:4738842-4738843|-/C|frameshift_variant;REV__DCHS1|p.G1030Afs*31|1|0.16|ENSG00000166341|chr11:6632423-6632423|C/-|frameshift_variant;REV__DCHS1|p.G1030Afs*31|1|0.16|ENSG00000166341|chr11:6632423-6632423|C/-|frameshift_variant;REV__DCHS1|p.G2765Rfs*10|1|0.26|ENSG00000166341|chr11:6623383-6623384|-/T|frameshift_variant;REV__DCHS1|p.G2765Rfs*10|1|0.26|ENSG00000166341|chr11:6623383-6623384|-/T|frameshift_variant;REV__DCHS1|p.H2834Sfs*7|1|0.44|ENSG00000166341|chr11:6623177-6623178|-/C|frameshift_variant;REV__DCHS1|p.H2834Sfs*7|1|0.44|ENSG00000166341|chr11:6623177-6623178|-/C|frameshift_variant;REV__DCHS1|p.Q374Pfs*4|1|0.4|ENSG00000166341|chr11:6640493-6640494|-/G|frameshift_variant;REV__DCHS1|p.Q374Pfs*4|1|0.4|ENSG00000166341|chr11:6640493-6640494|-/G|frameshift_variant;REV__DPEP2|p.R41Qfs*26|2|0.25|ENSG00000167261|chr16:67993092-67993093|-/G|frameshift_variant;REV__EIF2AK3|p.D965Gfs*7|1|0.04|ENSG00000172071|chr2:88570965-88570966|-/GTTTTCATTAAAATAC|frameshift_variant;REV__EIF2AK3|p.K126Sfs*27|1|0.3|ENSG00000172071|chr2:88613785-88613785|T/-|frameshift_variant;REV__ENSG00000001036|ENST00000002165|FUCA2;REV__ENSG00000001036|ENST00000002165|FUCA2;REV__ENSG00000054654|ENST00000555002|SYNE2;REV__ENSG00000054654|ENST00000555002|SYNE2;REV__ENSG00000064601|ENST00000646241|CTSA;REV__ENSG00000064601|ENST00000646241|CTSA;REV__ENSG00000070031|ENST00000176195|SCT;REV__ENSG00000083807|ENST00000263093|SLC27A5;REV__ENSG00000083807|ENST00000263093|SLC27A5;REV__ENSG00000083857|ENST00000441802|FAT1;REV__ENSG00000087116|ENST00000251582|ADAMTS2;REV__ENSG00000088812|ENST00000262919|ATRN;REV__ENSG00000104972|ENST00000324602|LILRB1;REV__ENSG00000104972|ENST00000324602|LILRB1;REV__ENSG00000109255|ENST00000264218|NMU;REV__ENSG00000109743|ENST00000265016|BST1;REV__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14114-3|LRP8;REV__nc|ENSG00000157193|Q14114-3|LRP8;REV__nc|ENSG00000157193|Q14114-3|LRP8;REV__nc|ENSG00000157193|Q14114-4|LRP8;REV__nc|ENSG00000157193|Q14114-4|LRP8;REV__nc|ENSG00000157193|Q14114-4|LRP8;REV__nc|ENSG00000157193|Q14114-4|LRP8;REV__nc|ENSG00000167261|Q9H4A9-2|DPEP2;REV__nc|ENSG00000167261|Q9H4A9-3|DPEP2;REV__nc|ENSG00000167680|Q9H3T3-3|SEMA6B;REV__nc|ENSG00000167925|Q8N2G8-2|GHDC;REV__nc|ENSG00000167925|Q8N2G8-3|GHDC;REV__nc|ENSG00000168056|Q9NS15-2|LTBP3;REV__nc|ENSG00000168056|Q9NS15-2|LTBP3;REV__nc|ENSG00000168056|Q9NS15-2|LTBP3;REV__nc|ENSG00000182685|Q6PL45|BRICD5;REV__nc|ENSG00000185033|Q9NPR2-2|SEMA4B;REV__nc|ENSG00000185033|Q9NPR2-2|SEMA4B;REV__nc|ENSG00000185033|Q9NPR2-2|SEMA4B;REV__nc|ENSG00000185033|Q9NPR2-2|SEMA4B;REV__nc|ENSG00000185896|P11279-2|LAMP1;REV__nc|ENSG00000185896|P11279-2|LAMP1;REV__nc|ENSG00000185896|P11279-2|LAMP1;REV__nc|ENSG00000204301|Q99466-3|NOTCH4;REV__nc|ENSG00000204301|Q99466-3|NOTCH4;REV__nc|ENSG00000204301|Q99466-3|NOTCH4;REV__nc|ENSG00000204301|Q99466-3|NOTCH4;REV__nc|ENSG00000204962|Q9Y5H6-2|PCDHA8;REV__nc|ENSG00000204967|Q9UN74-2|PCDHA4;REV__nc|ENSG00000213402|Q14761|PTPRCAP;REV__nc|ENSG00000213402|Q14761|PTPRCAP;REV__nc|ENSG00000228789|E2RYF7|HCG22;REV__nc|ENSG00000243232|Q9Y5I4-2|PCDHAC2;REV__nc|ENSG00000243232|Q9Y5I4-2|PCDHAC2;REV__nc|ENSG00000283654|A0A1B0GTW7-2|CIROP;REV__nc|ENSG00000283654|A0A1B0GTW7-2|CIROP;REV__nc|ENSG00000283654|A0A1B0GTW7-2|CIROP;REV__nc|ENSG00000283654|A0A1B0GTW7-3|CIROP;REV__nc|ENSG00000283654|A0A1B0GTW7-3|CIROP;REV__nc|ENSG00000283654|A0A1B0GTW7-3|CIROP;REV__nc|ENSG00000283706|Q9UI38|PRSS50;REV__nc|ENSG00000290691|A6NGW2|STRCP1;REV__nc|ENSG00000290691|A6NGW2|STRCP1;REV__nc|ENSG00000290691|A6NGW2|STRCP1;REV__nc|ENSG00000290691|A6NGW2|STRCP1;REV__NOTCH4|p.G1154Afs*150|2|0.09|ENSG00000204301|chr6:32202370-32202370|C/-|frameshift_variant;REV__NOTCH4|p.G1154Afs*150|2|0.09|ENSG00000204301|chr6:32202370-32202370|C/-|frameshift_variant;REV__NOTCH4|p.G1154Afs*150|2|0.09|ENSG00000204301|chr6:32202370-32202370|C/-|frameshift_variant;REV__NOTCH4|p.G1154Afs*150|2|0.09|ENSG00000204301|chr6:32202370-32202370|C/-|frameshift_variant;REV__NOTCH4|p.P1441Lfs*17|1|0.22|ENSG00000204301|chr6:32199139-32199139|G/-|frameshift_variant;REV__NOTCH4|p.P1441Lfs*17|1|0.22|ENSG00000204301|chr6:32199139-32199139|G/-|frameshift_variant;REV__NOTCH4|p.P1441Lfs*17|1|0.22|ENSG00000204301|chr6:32199139-32199139|G/-|frameshift_variant;REV__NOTCH4|p.P1441Lfs*17|1|0.22|ENSG00000204301|chr6:32199139-32199139|G/-|frameshift_variant;REV__NOTCH4|p.T705Dfs*23|1|0.1|ENSG00000204301|chr6:32214164-32214165|-/C|frameshift_variant;REV__NOTCH4|p.T705Dfs*23|1|0.1|ENSG00000204301|chr6:32214164-32214165|-/C|frameshift_variant;REV__NOTCH4|p.T705Dfs*23|1|0.1|ENSG00000204301|chr6:32214164-32214165|-/C|frameshift_variant;REV__NOTCH4|p.T705Dfs*23|1|0.1|ENSG00000204301|chr6:32214164-32214165|-/C|frameshift_variant;REV__PCDHA12|p.S17L|1|0.13|ENSG00000251664|chr5:140875522-140875522|C/T|missense_variant;REV__PCDHAC2|p.Y622Lfs*8|1|0.23|ENSG00000243232|chr5:140968624-140968625|-/T|frameshift_variant;REV__PCDHAC2|p.Y622Lfs*8|1|0.23|ENSG00000243232|chr5:140968624-140968625|-/T|frameshift_variant;REV__PLBD1|p.N214Tfs*4|1|0.06|ENSG00000121316|chr12:14536628-14536628|T/-|frameshift_variant;REV__PLXNA1|p.G417Afs*18|1|0.28|ENSG00000114554|chr3:126991434-126991434|G/-|frameshift_variant;REV__PLXNA1|p.G417Afs*18|1|0.28|ENSG00000114554|chr3:126991434-126991434|G/-|frameshift_variant;REV__PLXNA1|p.G417Afs*18|1|0.28|ENSG00000114554|chr3:126991434-126991434|G/-|frameshift_variant;REV__PLXNA1|p.G417Afs*18|1|0.28|ENSG00000114554|chr3:126991434-126991434|G/-|frameshift_variant;REV__PLXNA1|p.Q1019Rfs*22|3|0.36|ENSG00000114554|chr3:127016548-127016548|C/-|frameshift_variant;REV__PLXNA1|p.Q1019Rfs*22|3|0.36|ENSG00000114554|chr3:127016548-127016548|C/-|frameshift_variant;REV__PLXNA1|p.Q1019Rfs*22|3|0.36|ENSG00000114554|chr3:127016548-127016548|C/-|frameshift_variant;REV__PLXNA1|p.Q1019Rfs*22|3|0.36|ENSG00000114554|chr3:127016548-127016548|C/-|frameshift_variant;REV__PTPRN2|p.Q286Pfs*35|1|0.14|ENSG00000155093|chr7:158166984-158166985|-/G|frameshift_variant;REV__PTPRN2|p.Q286Pfs*35|1|0.14|ENSG00000155093|chr7:158166984-158166985|-/G|frameshift_variant;REV__SEMA4B|p.S797Vfs*6|1|0.32|ENSG00000185033|chr15:90228507-90228508|-/C|frameshift_variant;REV__SEMA4B|p.S797Vfs*6|1|0.32|ENSG00000185033|chr15:90228507-90228508|-/C|frameshift_variant;REV__SEMA4B|p.S797Vfs*6|1|0.32|ENSG00000185033|chr15:90228507-90228508|-/C|frameshift_variant;REV__SEMA4B|p.S797Vfs*6|1|0.32|ENSG00000185033|chr15:90228507-90228508|-/C|frameshift_variant;REV__SEMA6B|p.R276Afs*11|3|0.39|ENSG00000167680|chr19:4552585-4552585|G/-|frameshift_variant;REV__SEMA6C|p.P861Lfs*37|2|0.24|ENSG00000143434|chr1:151132695-151132695|G/-|frameshift_variant;REV__SHBG|p.C362Afs*2|1|0.14|ENSG00000129214|chr17:7633223-7633223|T/-|frameshift_variant;REV__SHBG|p.C362Afs*2|1|0.14|ENSG00000129214|chr17:7633223-7633223|T/-|frameshift_variant;REV__SHBG|p.C362Afs*2|1|0.14|ENSG00000129214|chr17:7633223-7633223|T/-|frameshift_variant;REV__SHBG|p.L175Afs*39|1|0.38|ENSG00000129214|chr17:7631322-7631323|-/G|frameshift_variant;REV__SHBG|p.L175Afs*39|1|0.38|ENSG00000129214|chr17:7631322-7631323|-/G|frameshift_variant;REV__SHBG|p.L175Afs*39|1|0.38|ENSG00000129214|chr17:7631322-7631323|-/G|frameshift_variant;REV__SHBG|p.L175Cfs*45|1|0.53|ENSG00000129214|chr17:7631323-7631323|G/-|frameshift_variant;REV__SHBG|p.L175Cfs*45|1|0.53|ENSG00000129214|chr17:7631323-7631323|G/-|frameshift_variant;REV__SHBG|p.L175Cfs*45|1|0.53|ENSG00000129214|chr17:7631323-7631323|G/-|frameshift_variant;REV__STRC|p.P154Lfs*30|1|0.3|ENSG00000242866|chr15:43617960-43617960|G/-|frameshift_variant;REV__STRC|p.P154Lfs*30|1|0.3|ENSG00000242866|chr15:43617960-43617960|G/-|frameshift_variant;REV__STRC|p.P154Lfs*30|1|0.3|ENSG00000242866|chr15:43617960-43617960|G/-|frameshift_variant;REV__STRC|p.P154Lfs*30|1|0.3|ENSG00000242866|chr15:43617960-43617960|G/-|frameshift_variant;REV__STRC|p.V1549Gfs*8|1|0.04|ENSG00000242866|chr15:43601451-43601452|-/CAGAC|frameshift_variant;REV__STRC|p.V1549Gfs*8|1|0.04|ENSG00000242866|chr15:43601451-43601452|-/CAGAC|frameshift_variant;REV__STRC|p.V1549Gfs*8|1|0.04|ENSG00000242866|chr15:43601451-43601452|-/CAGAC|frameshift_variant;REV__STRC|p.V1549Gfs*8|1|0.04|ENSG00000242866|chr15:43601451-43601452|-/CAGAC|frameshift_variant;REV__UCN3|p.I83Sfs*49|1|0.36|ENSG00000178473|chr10:5373963-5373963|C/-|frameshift_variant;REV__WFIKKN2|p.S143Pfs*32|1|0.54|ENSG00000173714|chr17:50839711-50839712|-/CC|frameshift_variant;SEMA4B|p.S797Vfs*6|1|0.32|ENSG00000185033|chr15:90228507-90228508|-/C|frameshift_variant;SEMA4B|p.S797Vfs*6|1|0.32|ENSG00000185033|chr15:90228507-90228508|-/C|frameshift_variant;SEMA4B|p.S797Vfs*6|1|0.32|ENSG00000185033|chr15:90228507-90228508|-/C|frameshift_variant;SEMA4B|p.S797Vfs*6|1|0.32|ENSG00000185033|chr15:90228507-90228508|-/C|frameshift_variant;SEMA6B|p.R276Afs*11|3|0.39|ENSG00000167680|chr19:4552585-4552585|G/-|frameshift_variant;SEMA6C|p.P861Lfs*37|2|0.24|ENSG00000143434|chr1:151132695-151132695|G/-|frameshift_variant;SHBG|p.C362Afs*2|1|0.14|ENSG00000129214|chr17:7633223-7633223|T/-|frameshift_variant;SHBG|p.C362Afs*2|1|0.14|ENSG00000129214|chr17:7633223-7633223|T/-|frameshift_variant;SHBG|p.C362Afs*2|1|0.14|ENSG00000129214|chr17:7633223-7633223|T/-|frameshift_variant;SHBG|p.L175Afs*39|1|0.38|ENSG00000129214|chr17:7631322-7631323|-/G|frameshift_variant;SHBG|p.L175Afs*39|1|0.38|ENSG00000129214|chr17:7631322-7631323|-/G|frameshift_variant;SHBG|p.L175Afs*39|1|0.38|ENSG00000129214|chr17:7631322-7631323|-/G|frameshift_variant;SHBG|p.L175Cfs*45|1|0.53|ENSG00000129214|chr17:7631323-7631323|G/-|frameshift_variant;SHBG|p.L175Cfs*45|1|0.53|ENSG00000129214|chr17:7631323-7631323|G/-|frameshift_variant;SHBG|p.L175Cfs*45|1|0.53|ENSG00000129214|chr17:7631323-7631323|G/-|frameshift_variant;STRC|p.P154Lfs*30|1|0.3|ENSG00000242866|chr15:43617960-43617960|G/-|frameshift_variant;STRC|p.P154Lfs*30|1|0.3|ENSG00000242866|chr15:43617960-43617960|G/-|frameshift_variant;STRC|p.P154Lfs*30|1|0.3|ENSG00000242866|chr15:43617960-43617960|G/-|frameshift_variant;STRC|p.P154Lfs*30|1|0.3|ENSG00000242866|chr15:43617960-43617960|G/-|frameshift_variant;STRC|p.V1549Gfs*8|1|0.04|ENSG00000242866|chr15:43601451-43601452|-/CAGAC|frameshift_variant;STRC|p.V1549Gfs*8|1|0.04|ENSG00000242866|chr15:43601451-43601452|-/CAGAC|frameshift_variant;STRC|p.V1549Gfs*8|1|0.04|ENSG00000242866|chr15:43601451-43601452|-/CAGAC|frameshift_variant;STRC|p.V1549Gfs*8|1|0.04|ENSG00000242866|chr15:43601451-43601452|-/CAGAC|frameshift_variant;UCN3|p.I83Sfs*49|1|0.36|ENSG00000178473|chr10:5373963-5373963|C/-|frameshift_variant;WFIKKN2|p.S143Pfs*32|1|0.54|ENSG00000173714|chr17:50839711-50839712|-/CC|frameshift_variant	0	1.7418937515398478	1				NaN	NaN	0	NaN	53	2329	2383
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2385	12.519	NaN	4948.9	30	0	1838.7	0.106	+			14345	GTAAKSITKK	10	64	502.80846363543566	1003.6023743376713	2	502.8080749511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTAAKSITKK_	ENSG00000133574|ENST00000255945|GIMAP4	169.9932187642096	0.0036876354521960214	1				NaN	NaN	0	NaN	54	2329	2383
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2386	12.521	NaN	1218.6	30	0	235.11	0.106			+	12047	FYTEHPSVH	9	17	558.7594604492188	NaN	0	558.7594604492188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FYTEHPSVH_	REV__ENSG00000240849|ENST00000371652|PEDS1;REV__ENST00000453505.6_1_20:48741597-48767785:-|nuORF;REV__nc|ENSG00000240849|A5PLL7-2|PEDS1;REV__nc|ENSG00000244687|Q13404-1|UBE2V1	12.959181472943097	0.3931207604263714	1				NaN	NaN	0	NaN	55	2329	2383
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2387	12.522	NaN	672.88	30	0	140.89	0.037				-1	RRCLACEC	8	15	562.7392578125	NaN	0	562.7392578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	3 Carbamidomethyl (C)	_RRC(Carbamidomethyl (C))LAC(Carbamidomethyl (C))EC(Carbamidomethyl (C))_	ENST00000477931.5_1_20:57464155-57485881:+|nuORF;ENST00000480232.5_1_20:57464299-57464407:+|nuORF;ENST00000480975.5_1_20:57464272-57485881:+|nuORF;ENST00000484504.5_1_20:57464299-57475007:+|nuORF;ENST00000485673.5_1_20:57464182-57464599:+|nuORF	8.231297230196988	1.7418937515398478	1				NaN	NaN	0	NaN	56	2329	2383
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2392	12.538	NaN	961.85	30	0	294.88	0.143	+			21582	KPGTVSQQAL	10	15	514.7881469726562	NaN	0	514.7881469726562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KPGTVSQQAL_	ENSG00000100393|ENST00000263253|EP300	12.811709888998246	0.42010282974921537	1				NaN	NaN	0	NaN	58	2332	2391
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2406	12.603	NaN	3793.3	30	0	1519.7	0.142	+			14941	GTMGVSKHK	9	58	472.7524151630128	943.4902773928256	2	472.75238037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTMGVSKHK_	ENSG00000125676|ENST00000245838|THOC2;nc|ENSG00000125676|Q8NI27-2|THOC2	58.22992032128504	0.22837015374068087	1				NaN	NaN	0	NaN	60	2344	2405
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2413	12.636	NaN	3579.7	30	0	1105.2	0.142	+			4576	ATLERLKK	8	58	479.8053728623414	957.5961927914828	2	479.8052673339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATLERLKK_	ENSG00000091436|ENST00000375213|MAP3K20;nc|ENSG00000091436|Q9NYL2-2|MAP3K20	82.24051045832904	0.30490469762271794	1				NaN	NaN	0	NaN	61	2350	2412
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2417	12.653	NaN	1671	30	0	318.19	0.214			+	30608	QARAQQARAK	10	22	564.3226320464844	1126.6307111597687	2	564.3240966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QARAQQARAK_	REV__ASXL3|p.P2037Hfs*43|1|0.33|ENSG00000141431|chr18:33745951-33745951|C/-|frameshift_variant;REV__ENSG00000141431|ENST00000269197|ASXL3	11.635926663890343	0.7573217108608358	1				NaN	NaN	0	NaN	62	2353	2416
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2418	12.656	NaN	1469.6	30	0	178.24	0.034			+	1666	AGRDGKLGVA	10	43	472.2695226853742	NaN	0	472.269775390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AGRDGKLGVA_	REV__ENSG00000084636|ENST00000373672|COL16A1;REV__ENST00000488128.6_1_1:32121928-32135507:-|nuORF;REV__nc|ENSG00000084636|Q07092-2|COL16A1	36.446750945000026	0.3805027428805705	1				NaN	NaN	0	NaN	63	2353	2416
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2428	12.703	NaN	1069.7	30	0	490.86	0.145				-1	RFCLYREK	8	22	586.3047128457289	1170.5948727582577	2	586.305908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_RFC(Carbamidomethyl (C))LYREK_	ENST00000474436.1_1_9:35089091-35089349:-|nuORF	12.959181472943097	0.7887000251064199	1				NaN	NaN	0	NaN	64	2362	2427
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2436	12.737	NaN	1922.4	30	0	309.5	0.145			+	38350	SRLQIFCRE	9	29	576.3026101810673	NaN	0	576.3023071289062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SRLQIFCRE_	REV__sp|F5HAY6|VICA_HCMVMViralinhibitorofcaspase-8-inducedapoptosisOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL36PE=1SV=1;REV__sp|P16767|UL36_HCMVAUncharacterizedproteinUL36OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL36PE=3SV=1	18.262085536374414	0.37517301184500873	1				NaN	NaN	0	NaN	66	2368	2435
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2441	12.754	NaN	27645	30	0	3961.5	0.214	+			33950	RSASSATQVHK	11	79	586.3123693331555	1170.610185733111	2	586.3128051757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RSASSATQVHK_	ENST00000361272.8_2_8:17102747-17104366:-|nuORF	72.09557110113691	0.21826960075221502	1				NaN	NaN	0	NaN	68	2371	2440
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2442	12.758	NaN	11503	30	0	4737.6	0.106				-1	RMPLDFSNTV	10	56	598.2918206585695	1194.5690883839388	2	598.29150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_RM(Oxidation (M))PLDFSNTV_	NLRC3|p.T226M|1|0.42|ENSG00000167984|chr16:3564260-3564260|G/A|missense_variant	33.921630207806714	0.6028135429846169	1				NaN	NaN	0	NaN	69	2371	2440
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2443	12.76	NaN	2394.3	30	0	618.73	0.038			+	-1	FALSQGWACGL	11	32	605.2874415417522	1208.5603301503043	2	605.2867431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_FALSQGWAC(Carbamidomethyl (C))GL_	REV__ENSG00000155269|ENST00000382487|GPR78	20.94693142431847	0.7700749696703488	1				NaN	NaN	0	NaN	70	2371	2440
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2447	12.774	NaN	4432.6	30	0	1405.3	0.213			+	11672	FQTSSTAFSKK	11	51	616.318808484605	1230.62306403601	2	616.3192138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FQTSSTAFSKK_	REV__DNAH6|p.L3633*|2|0.38|ENSG00000115423|chr2:84784749-84784749|T/-|frameshift_variant;REV__DNAH6|p.M132Cfs*61|2|0.12|ENSG00000115423|chr2:84525727-84525727|A/-|frameshift_variant;REV__DNAH6|p.N304Ifs*16|1|0.2|ENSG00000115423|chr2:84544475-84544475|A/-|frameshift_variant;REV__DNAH6|p.R2682Kfs*27|1|0.42|ENSG00000115423|chr2:84701316-84701317|-/A|frameshift_variant;REV__DNAH6|p.S3773Lfs*5|1|0.09|ENSG00000115423|chr2:84796377-84796377|T/-|frameshift_variant;REV__ENSG00000115423|ENST00000389394|DNAH6;REV__ENST00000468661.1_1_2:84744950-84771368:+|nuORF;REV__ENST00000476689.5_1_2:84744950-84775489:+|nuORF;REV__nc|ENSG00000115423|Q9C0G6-4|DNAH6	28.5767321226876	0.690044582712672	1				NaN	NaN	0	NaN	71	2374	2446
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2448	12.777	NaN	4464.3	30	0	1237.3	0.106				-1	KGQNTKCPMSC	11	49	635.272772106092	1268.530991278984	2	635.2728881835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_KGQNTKCPM(Oxidation (M))SC(Carbamidomethyl (C))_	ENSG00000221947|ENST00000408926|XKR9	23.52269567125451	0.7430573033454468	1				NaN	NaN	0	NaN	72	2374	2446
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2449	12.779	NaN	3594.8	30	0	729.38	0.106			+	-1	ACMAAERCLAM	11	17	658.2662935419903	NaN	0	658.2664794921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C),2 Oxidation (M)	_AC(Carbamidomethyl (C))M(Oxidation (M))AAERC(Carbamidomethyl (C))LAM(Oxidation (M))_	REV__ENSG00000143748|ENST00000281701|NVL;REV__ENST00000462893.1_1_1:224477164-224482036:-|nuORF;REV__nc|ENSG00000143748|O15381-2|NVL;REV__nc|ENSG00000143748|O15381-3|NVL;REV__nc|ENSG00000143748|O15381-4|NVL;REV__nc|ENSG00000143748|O15381-5|NVL	6.31265097734313	0.456735970842152	1				NaN	NaN	0	NaN	73	2374	2446
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2450	12.781	NaN	3048.5	30	0	541.36	0.106				-1	SDAKEVMEHR	10	33	609.2811888848931	1216.5478248365862	2	609.2811279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_SDAKEVM(Oxidation (M))EHR_	AKT2|p.P397S|1|0.31|ENSG00000105221|chr19:40235337-40235337|G/A|missense_variant;ENSG00000105221|ENST00000392038|AKT2;ENST00000391844.8_1_19:40739781-40791100:-|nuORF;ENST00000489375.5_1_19:40739781-40741265:-|nuORF;ENST00000496089.6_1_19:40739781-40742062:-|nuORF;nc|ENSG00000105221|P31751-2|AKT2	16.006774744331256	0.7351120747673535	1				NaN	NaN	0	NaN	74	2374	2446
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2451	12.783	NaN	1993.5	30	0	456.61	0.106	+			7023	CSEHCEEAYRV	11	17	663.2657470703125	NaN	0	663.2657470703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_CSEHCEEAYRV_	USHBP1|p.Y348C|1|0.18|ENSG00000130307|chr19:17259292-17259292|T/C|missense_variant	12.811709888998246	0.456735970842152	1				NaN	NaN	0	NaN	75	2374	2446
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2452	12.785	NaN	1887	30	0	356.36	0.106			+	-1	QTCNEMQSLR	10	21	613.2713012695312	NaN	0	613.2713012695312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_QTCNEM(Oxidation (M))QSLR_	REV__ENST00000492812.5_1_2:241656783-241664929:-|nuORF	13.45404412870281	0.4201028297492154	1				NaN	NaN	0	NaN	76	2374	2446
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2453	12.787	NaN	1820.4	30	0	296.61	0.034	+			6262	AVSKVSTNK	9	44	467.2717891821286	932.5290254310572	2	467.27203369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AVSKVSTNK_	ENSG00000173744|ENST00000310078|AGFG1;nc|ENSG00000173744|P52594-2|AGFG1;nc|ENSG00000173744|P52594-3|AGFG1;nc|ENSG00000173744|P52594-4|AGFG1	80.45461616416974	0.09558281504443908	1				NaN	NaN	0	NaN	77	2374	2446
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2460	12.818	NaN	3494.6	30	0	405.04	0.214	+			39040	SSSPGTSVKK	10	55	489.26654169237474	976.5185304515495	2	489.26605224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSSPGTSVKK_	ENSG00000135720|ENST00000258198|DYNC1LI2;nc|ENSG00000135720|O43237-2|DYNC1LI2	54.722347961057174	0.4138398245444204	1				NaN	NaN	0	NaN	78	2380	2459
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2461	12.821	NaN	1324.6	30	0	389.37	0.106	+			25032	LLHGSLVQE	9	40	498.2794695691144	994.5443862050288	2	498.2801513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LLHGSLVQE_	ENSG00000160796|ENST00000450053|NBEAL2;NBEAL2|p.A1138V|1|0.1|ENSG00000160796|chr3:46998987-46998987|C/T|missense_variant;NBEAL2|p.C1705Vfs*45|1|0.24|ENSG00000160796|chr3:47002246-47002246|T/-|frameshift_variant;NBEAL2|p.P1303Lfs*63|1|0.21|ENSG00000160796|chr3:47000002-47000002|C/-|frameshift_variant;NBEAL2|p.Y1346Tfs*20|1|0.44|ENSG00000160796|chr3:47000132-47000132|T/-|frameshift_variant;nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2	44.116797842482775	0.37197099687881774	1				NaN	NaN	0	NaN	79	2380	2459
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2462	12.823	NaN	1528.2	30	0	218.73	0.034	+			41732	SVSGPKRPQ	9	48	478.26928525205	954.5240175709	2	478.26885986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVSGPKRPQ_	ENSG00000136381|ENST00000258886|IREB2;IREB2|p.F724Lfs*48|1|0.13|ENSG00000136381|chr15:78490512-78490512|T/-|frameshift_variant	49.44154591367651	0.3095138337212152	1				NaN	NaN	0	NaN	80	2380	2459
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2473	12.871	NaN	1981	30	0	296.94	0.144			+	-1	NQKKLHQK	8	54	533.3126129914913	NaN	0	533.3129272460938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))NQKKLHQK_	REV__ENST00000486673.1_1_X:128678947-128683662:+|nuORF	68.78682469695295	1.7418937515398478	1				NaN	NaN	0	NaN	82	2389	2472
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2478	12.888	NaN	3360.9	30	0	385.99	0.141	+			3480	ASSGALRSK	9	53	438.7483459350436	875.4821389368872	2	438.74822998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASSGALRSK_	ENSG00000067066|ENST00000340126|SP100;nc|ENSG00000067066|P23497-2|SP100;nc|ENSG00000067066|P23497-3|SP100;nc|ENSG00000067066|P23497-5|SP100;nc|ENSG00000067066|P23497-6|SP100;nc|ENSG00000067066|P23497-7|SP100;nc|ENSG00000067066|P23497|SP100;SP100|p.A416T|1|0.67|ENSG00000067066|chr2:230467170-230467170|G/A|missense_variant	72.2432373244024	0.13108886737667413	1				NaN	NaN	0	NaN	84	2392	2477
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2483	12.905	NaN	1780.7	30	0	188.3	0.143	+			3453	ASRGRSFKQ	9	53	518.785660664788	1035.556768396376	2	518.7857666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASRGRSFKQ_	ENSG00000188352|ENST00000338382|FOCAD;ENST00000603552.1_1_9:20882043-20885259:+|nuORF	68.84614121027924	0.14577793175421136	1				NaN	NaN	0	NaN	86	2395	2482
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2487	12.922	NaN	6112.8	30	0	1711.3	0.214	+			39482	STFGGHKSEK	10	63	539.2699792609429	1076.5254055886858	2	539.2705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STFGGHKSEK_	ABL1|p.R785Gfs*3|2|0.3|ENSG00000097007|chr9:130884637-130884637|C/-|frameshift_variant;ENSG00000097007|ENST00000318560|ABL1;nc|ENSG00000097007|P00519-2|ABL1	81.52500206392136	0.18316182710238588	1				NaN	NaN	0	NaN	87	2398	2486
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2488	12.926	NaN	2464.9	30	0	349.83	0.106				-1	SWPLLPMLPA	10	44	570.8101557792531	NaN	0	570.810302734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_SWPLLPM(Oxidation (M))LPA_	ENST00000600534.1_1_19:59084484-59085060:+|nuORF	38.80614096846853	0.372755673314885	1				NaN	NaN	0	NaN	88	2398	2486
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2489	12.928	NaN	2512.2	30	0	795.05	0.036			+	-1	FEGLIEYCA	9	23	551.2490689877832	NaN	0	551.2492065429688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_FEGLIEYC(Carbamidomethyl (C))A_	REV__ENSG00000176927|ENST00000394835|EFCAB5;REV__nc|ENSG00000176927|A4FU69-3|EFCAB5	12.206847966760668	0.39566704307768535	1				NaN	NaN	0	NaN	89	2398	2486
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2494	12.943	NaN	49175	30	0	8034.6	0.214	+			35454	SASSATQVHK	10	92	508.26195599859443	1014.5093590639889	2	508.2618103027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SASSATQVHK_	ENST00000361272.8_2_8:17102747-17104366:-|nuORF	185.32735939749918	0.0007028557303517356	1				NaN	NaN	0	NaN	91	2401	2493
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2495	12.946	NaN	11836	30	0	3368.6	0.106	+			10171	ESWVQEYV	8	53	520.2409539611899	1038.4673549891797	2	520.2415771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ESWVQEYV_	ENSG00000275302|ENST00000615863|CCL4;ENST00000378350.4_17:34539872-34539968:+|nuORF;nc|ENSG00000276070|Q8NHW4-2|CCL4L1;nc|ENSG00000276070|Q8NHW4|CCL4L1	45.9519527083369	0.6193794311207887	1				NaN	NaN	0	NaN	92	2401	2493
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2496	12.948	NaN	30138	30	0	19882	0.106	+			4849	ATPKKTVPK	9	48	323.8743942964727	968.6013534896181	3	323.87445068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATPKKTVPK_	ENSG00000166197|ENST00000605788|NOLC1;nc|ENSG00000166197|Q14978-3|NOLC1	40.77816245573522	0.41113185337114944	1				NaN	NaN	0	NaN	93	2401	2493
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2497	12.95	NaN	1755.1	30	0	309.71	0.106	+			3988	ATAVAHCKR	9	48	478.75762939453125	NaN	0	478.75762939453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATAVAHCKR_	chr19:39435705-39435848|468|276.17|0.0|24.72|-|0|RPS16,RPS16|1;ENSG00000105193|ENST00000251453|RPS16;ENST00000601390.1_1_19:39926180-39926535:-|nuORF	66.42927471994793	0.121898005645852	1				NaN	NaN	0	NaN	94	2401	2493
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2498	12.952	NaN	14230	30	0	5954.3	0.106	+			15186	GTSLRPAEGQ	10	55	339.1769721741193	1014.509087122558	3	339.1771240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTSLRPAEGQ_	ENST00000358701.9_2_9:139098411-139098615:-|nuORF	50.033510581677724	0.4566913063131936	1				NaN	NaN	0	NaN	95	2401	2493
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2499	12.954	NaN	4373.6	30	0	1367.7	0.106			+	-1	QAMSHDECAG	10	28	561.2029793241057	1120.3914057150114	2	561.2039184570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),Oxidation (M)	_QAM(Oxidation (M))SHDEC(Carbamidomethyl (C))AG_	REV__ATP7A|p.C661Lfs*24|1|0.09|ENSG00000165240|chrX:78011476-78011477|-/T|frameshift_variant;REV__ATP7A|p.K1294Nfs*3|1|0.26|ENSG00000165240|chrX:78042659-78042659|G/-|frameshift_variant;REV__ATP7A|p.P403Afs*13|1|0.09|ENSG00000165240|chrX:77989821-77989822|-/A|frameshift_variant;REV__ENSG00000165240|ENST00000341514|ATP7A;REV__nc|ENSG00000165240|Q04656-2|ATP7A;REV__nc|ENSG00000165240|Q04656-3|ATP7A;REV__nc|ENSG00000165240|Q04656-5|ATP7A	9.705651100619752	0.7671300402814404	1				NaN	NaN	0	NaN	96	2401	2493
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2500	12.955	NaN	4933.4	30	0	942.95	0.036			+	7053	CTFAMRYGD	9	30	532.2199683789968	1062.4253838247935	2	532.2203369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_CTFAMRYGD_	REV__ENSG00000162664|ENST00000340281|ZNF326;REV__ENST00000394583.7_1_1:90470639-90493257:+|nuORF;REV__nc|ENSG00000162664|Q5BKZ1-3|ZNF326	15.641811463095205	0.6112419832031292	1				NaN	NaN	0	NaN	97	2401	2493
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2505	12.97	NaN	8147.2	30	0	1887.7	0.214	+			5605	AVCGKVKCK	9	63	525.2830187491159	1048.5514845650316	2	525.28369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_AVC(Carbamidomethyl (C))GKVKC(Carbamidomethyl (C))K_	ENSG00000135317|ENST00000314673|SNX14;ENST00000508980.5_1_6:86270935-86284080:-|nuORF;nc|ENSG00000135317|Q9Y5W7-2|SNX14;nc|ENSG00000135317|Q9Y5W7-3|SNX14;nc|ENSG00000135317|Q9Y5W7-4|SNX14;SNX14|p.F173Lfs*5|3|0.42|ENSG00000135317|chr6:85565362-85565362|A/-|frameshift_variant	111.64827973302667	0.027316110422332632	1				NaN	NaN	0	NaN	99	2404	2504
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2506	12.974	NaN	3394.6	30	0	572.05	0.106			+	-1	LCWLCQVR	8	36	539.2699792609429	1076.5254055886858	2	540.2198486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LCWLC(Carbamidomethyl (C))QVR_	REV__ENSG00000162923|ENST00000414423|WDR26;REV__ENST00000486652.5_1_1:224577539-224589708:-|nuORF;REV__nc|ENSG00000162923|Q9H7D7-2|WDR26;REV__nc|ENSG00000162923|Q9H7D7|WDR26	26.79610172149135	0.7524337208463756	1				NaN	NaN	0	NaN	100	2404	2504
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2507	12.976	NaN	2062.5	30	0	1039.5	0.106	+			6273	AVSPDLHITP	10	25	350.5245056152344	NaN	0	350.5245056152344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVSPDLHITP_	ENSG00000144283|ENST00000389759|PKP4;nc|ENSG00000144283|Q99569-2|PKP4	30.317721548370564	0.4006274431774794	1				NaN	NaN	0	NaN	101	2404	2504
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2508	12.977	NaN	2773.7	30	0	617.62	0.106			+	2757	ARGRSYRK	8	28	497.2874414848578	992.5603300365157	2	497.2876892089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ARGRSYRK_	REV__ENST00000480451.1_1_22:17639677-17639998:-|nuORF	12.206847966760668	0.7875100812264838	1				NaN	NaN	0	NaN	102	2404	2504
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2509	12.979	NaN	2145.9	30	0	549.99	0.106	+			3991	ATAVHLKLV	9	36	317.8705139160156	NaN	0	317.8705139160156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATAVHLKLV_	ENSG00000114737|ENST00000348721|CISH;ENST00000491847.1_1_3:50645040-50646098:-|nuORF;nc|ENSG00000114737|Q9NSE2-2|CISH;nc|ENSG00000114737|Q9NSE2-3|CISH	24.20275056022122	0.35506675290109213	1				NaN	NaN	0	NaN	103	2404	2504
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2510	12.981	NaN	915.18	30	0	312.96	0.106			+	-1	RKRAFAVC	8	12	504.2816467285156	NaN	0	504.2816467285156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_RKRAFAVC(Carbamidomethyl (C))_	REV__ENSG00000187533|ENST00000344526|PRR27	5.08689130490037	1.7418937515398478	1				NaN	NaN	0	NaN	104	2404	2504
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2511	12.983	NaN	1758.8	30	0	660.67	0.036	+			29865	PLFPTLAFF	9	28	526.7935243769958	1051.5724958207916	2	527.7366943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PLFPTLAFF_	ENST00000485587.1_1_22:37419962-37421138:+|nuORF	13.775330524044264	0.6112419832031292	1				NaN	NaN	0	NaN	105	2404	2504
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2517	12.999	NaN	3239.7	30	0	359.15	0.214	+			40324	STSTTTHVTK	10	58	531.7754516601562	NaN	0	531.7754516601562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STSTTTHVTK_	ENSG00000088367|ENST00000338074|EPB41L1;nc|ENSG00000088367|Q9H4G0-2|EPB41L1;nc|ENSG00000088367|Q9H4G0-3|EPB41L1;nc|ENSG00000088367|Q9H4G0-4|EPB41L1	72.09557110113691	0.1383596426166609	1				NaN	NaN	0	NaN	108	2407	2516
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2518	13.002	NaN	22443	30	0	5692	0.106	+			46693	VGKRLTNLQ	9	83	343.54509021031396	1027.613441231142	3	343.545166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VGKRLTNLQ_	FLNC|p.D59N|1|0.25|ENSG00000128591|chr7:128830812-128830812|G/A|missense_variant	79.45101966838831	0.09992237243120712	1				NaN	NaN	0	NaN	109	2407	2516
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2519	13.004	NaN	1453.8	30	0	340.66	0.106	+			21716	KQKKPLVGK	9	28	513.34375	NaN	0	513.34375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KQKKPLVGK_	ENSG00000174444|ENST00000307961|RPL4;ENST00000422486.1_1_3:185135285-185135612:-|nuORF;ENST00000567229.5_1_15:66791747-66793486:-|nuORF	27.882242232435846	0.3367954786602879	1				NaN	NaN	0	NaN	110	2407	2516
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2520	13.006	NaN	2924.3	30	0	753.14	0.037			+	-1	THQSLFEYC	9	16	592.7571230880384	1183.4996932428767	2	592.7548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_THQSLFEYC(Carbamidomethyl (C))_	REV__ENSG00000114374|ENST00000338981|USP9Y;REV__ENST00000426564.6_1_Y:14821380-14953057:+|nuORF;REV__nc|ENSG00000114374|O00507-2|USP9Y	11.511019455917149	0.6112419832031292	1				NaN	NaN	0	NaN	111	2407	2516
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2525	13.021	NaN	20567	30	0	11631	0.214	+			20670	KGLVDYMVK	9	39	526.7935243769958	1051.5724958207916	2	526.7939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KGLVDYMVK_	tr|U7SNS0|U7SNS0_FUSNULipoproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01923PE=4SV=1	16.473147378115264	0.6112419832031293	1				NaN	NaN	0	NaN	113	2410	2524
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2526	13.024	NaN	1417.8	30	0	354.97	0.106			+	31972	QQVTKTKTL	9	39	523.814697265625	NaN	0	523.814697265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QQVTKTKTL_	REV__ENSG00000133858|ENST00000378743|ZFC3H1;REV__nc|ENSG00000133858|O60293-2|ZFC3H1;REV__ZFC3H1|p.E1034Dfs*26|1|0.04|ENSG00000133858|chr12:71632230-71632231|-/AATAAAAATACTG|frameshift_variant;REV__ZFC3H1|p.L1048*|1|0.18|ENSG00000133858|chr12:71632189-71632189|A/-|frameshift_variant;REV__ZFC3H1|p.L1693Ffs*10|1|0.1|ENSG00000133858|chr12:71619380-71619381|-/A|frameshift_variant;REV__ZFC3H1|p.V423Sfs*2|1|0.32|ENSG00000133858|chr12:71644889-71644890|-/T|frameshift_variant	52.936696900407355	0.1864545979552969	1				NaN	NaN	0	NaN	114	2410	2524
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2527	13.026	NaN	3820.3	30	0	795.26	0.106			+	11129	FFYMPTHLA	9	41	563.7742589304444	1125.5339649276887	2	563.7750244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FFYMPTHLA_	REV__ENSG00000173285|ENST00000641535|OR10K1	18.324413293986947	0.6112419832031293	1				NaN	NaN	0	NaN	115	2410	2524
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2528	13.028	NaN	611.37	30	0	135.27	0.106			+	25701	LRLCPMHQ	8	28	499.2568406909004	NaN	0	499.2573547363281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LRLCPMHQ_	REV__ENST00000402563.5_2_18:13666684-13671889:-|nuORF;REV__ENST00000589346.1_1_18:13666542-13671889:-|nuORF	18.324413293986947	1.7418937515398478	1				NaN	NaN	0	NaN	116	2410	2524
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2529	13.03	NaN	4040.3	30	0	1190.2	0.106	+			31477	QLAECKKTPG	10	41	537.7836731788723	1073.5527934245445	2	537.7832641601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QLAECKKTPG_	RAI14|p.Q938Tfs*22|1|0.35|ENSG00000039560|chr5:34829743-34829744|AC/-|frameshift_variant	28.081489160057373	0.6505064946289502	1				NaN	NaN	0	NaN	117	2410	2524
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2530	13.032	NaN	2316.4	30	0	715.75	0.106			+	31424	QKLYCEANL	9	17	541.27103983348	NaN	0	541.2705688476562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QKLYCEANL_	REV__ENST00000484546.1_1_9:123151516-123165527:-|nuORF	10.865556482863946	0.40020666175442315	1				NaN	NaN	0	NaN	118	2410	2524
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2531	13.033	NaN	2545.5	30	0	975.21	0.037			+	-1	FPCKGPDWQ	9	24	567.7567823527794	1133.4990117723587	2	567.757568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_FPC(Carbamidomethyl (C))KGPDWQ_	REV__ENST00000377102.5_1_13:80913253-80913610:-|nuORF	15.641811463095205	0.6112419832031292	1				NaN	NaN	0	NaN	119	2410	2524
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2540	13.053	NaN	2490.1	30	0	284.99	0.214				-1	TAQCALRVT	9	38	340.5135498046875	NaN	0	340.5135498046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_TAQC(Carbamidomethyl (C))ALRVT_	CELSR2|p.P2879Lfs*14|1|0.28|ENSG00000143126|chr1:109273557-109273557|C/-|frameshift_variant;CELSR2|p.V2215Wfs*26|2|0.42|ENSG00000143126|chr1:109269115-109269115|C/-|frameshift_variant;ENSG00000143126|ENST00000271332|CELSR2	37.81151784470057	0.28666463014928195	1				NaN	NaN	0	NaN	125	2413	2539
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2541	13.057	NaN	1398.5	30	0	417.96	0.106			+	16877	HPGSPPTPAG	10	44	459.22891344232403	NaN	0	459.2288818359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HPGSPPTPAG_	REV__ENST00000336702.7_1_11:118987385-118987784:+|nuORF	55.50420428727701	0.270804100254592	1				NaN	NaN	0	NaN	126	2413	2539
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2542	13.059	NaN	1392.7	30	0	339.75	0.036	+			4211	ATGAAGSRRRA	11	34	537.3009672946235	NaN	0	537.7841186523438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATGAAGSRRRA_	ENST00000503811.5_1_5:138629500-138629704:+|nuORF	33.921630207806714	0.41424167740351664	1				NaN	NaN	0	NaN	127	2413	2539
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2553	13.107	NaN	2642.8	30	0	300.88	0.141	+			5140	ATSVAAARK	9	51	437.7587678606077	873.5029827880154	2	437.75860595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSVAAARK_	chr20:45814470-45815390|467|14.73|0.65|4.5|+|ENST00000335046|UBE2C,UBE2C;chr20:45814470-45815854|444|10.08|0.42|4.6|+|ENST00000405520|UBE2C,UBE2C;chr20:45815540-45815854|455|13.48|0.56|4.59|+|ENST00000617055|UBE2C,UBE2C;ENSG00000175063|ENST00000356455|UBE2C;nc|ENSG00000175063|O00762-3|UBE2C;nc|ENSG00000175063|O00762-4|UBE2C	64.20726635412375	0.17854274437659667	1				NaN	NaN	0	NaN	129	2422	2552
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2557	13.124	NaN	3565.4	30	0	400	0.214			+	7037	CSQYTEKNLG	10	63	571.762392915308	1141.510232897416	2	571.7631225585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CSQYTEKNLG_	REV__ENSG00000091651|ENST00000219097|ORC6;REV__ENST00000563306.5_1_16:46723682-46729618:+|nuORF;REV__ENST00000569239.5_1_16:46723617-46727095:+|nuORF;REV__ORC6|p.A170Lfs*10|1|0.2|ENSG00000091651|chr16:46695613-46695613|A/-|frameshift_variant	65.46538089061403	0.31613324008013116	1				NaN	NaN	0	NaN	130	2425	2556
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2558	13.127	NaN	1395.9	30	0	192.2	0.035	+			40274	STSQQHLTK	9	39	515.2700954002556	1028.5256378673112	2	515.26953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STSQQHLTK_	ENSG00000111266|ENST00000298573|DUSP16	61.691277971877994	0.19951612995419254	1				NaN	NaN	0	NaN	131	2425	2556
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2565	13.158	NaN	3275.8	30	0	486.98	0.142	+			39665	STIGETSKK	9	50	475.76110695316044	949.5076609731209	2	475.7608337402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STIGETSKK_	ENSG00000100461|ENST00000359890|RBM23;ENST00000554955.5_1_14:23375339-23380602:-|nuORF;ENST00000557667.5_1_14:23373372-23380602:-|nuORF;nc|ENSG00000100461|Q86U06-3|RBM23	75.04331003522576	0.118981335847003	1				NaN	NaN	0	NaN	132	2431	2564
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2569	13.175	NaN	2449	30	0	421.19	0.145	+			48277	VTDPETHKSTK	11	55	621.8196629494813	1241.6247729657625	2	621.8196411132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTDPETHKSTK_	ENSG00000089327|ENST00000392219|FXYD5;ENST00000591716.6_1_19:35651643-35657154:+|nuORF	92.94320115499777	0.08672601920733168	1				NaN	NaN	0	NaN	133	2434	2568
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2573	13.191	NaN	5548.2	30	0	2100.5	0.214			+	-1	ATSPSPCVR	9	25	487.7401443468843	NaN	0	487.739990234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_ATSPSPC(Carbamidomethyl (C))VR_	REV__SETD1A|p.C243Afs*254|1|0.08|ENSG00000099381|chr16:30964176-30964176|C/-|frameshift_variant	18.324413293986947	0.3749620627292244	1				NaN	NaN	0	NaN	134	2437	2572
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2574	13.195	NaN	2651.7	30	0	434.36	0.106			+	31835	QPSEMGGQQS	10	27	524.7221181609639	NaN	0	524.7220458984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QPSEMGGQQS_	REV__DNMT3B|p.L454Sfs*136|2|0.27|ENSG00000088305|chr20:32796845-32796845|G/-|frameshift_variant;REV__ENSG00000088305|ENST00000328111|DNMT3B;REV__nc|ENSG00000088305|Q9UBC3-2|DNMT3B;REV__nc|ENSG00000088305|Q9UBC3-3|DNMT3B;REV__nc|ENSG00000088305|Q9UBC3-4|DNMT3B;REV__nc|ENSG00000088305|Q9UBC3-5|DNMT3B;REV__nc|ENSG00000088305|Q9UBC3-6|DNMT3B;REV__nc|ENSG00000088305|Q9UBC3-7|DNMT3B;REV__nc|ENSG00000088305|Q9UBC3-8|DNMT3B	18.262085536374414	0.4201028297492154	1				NaN	NaN	0	NaN	135	2437	2572
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2575	13.197	NaN	1519.7	30	0	297.46	0.106				-1	LWRSYSCEDPW	11	13	500.22018510198353	NaN	0	500.2203674316406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LWRSYSC(Carbamidomethyl (C))EDPW_	ENST00000348706.9_1_4:106345420-106367564:-|nuORF	6.320883175729509	0.456735970842152	1				NaN	NaN	0	NaN	136	2437	2572
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2576	13.199	NaN	1381.8	30	0	323.37	0.106				-1	SLQWNMMA	8	19	506.7143592978364	NaN	0	506.7147216796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Oxidation (M)	_SLQWNM(Oxidation (M))M(Oxidation (M))A_	SLC38A10|p.R144W|1|0.17|ENSG00000157637|chr17:81282260-81282260|G/A|missense_variant	8.231297230196988	1.7418937515398478	1				NaN	NaN	0	NaN	137	2437	2572
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2577	13.201	NaN	1408.5	30	0	415.05	0.106			+	-1	ENMMICVC	8	16	528.7031570709863	1055.3917612087726	2	528.7030639648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C)	_ENMMIC(Carbamidomethyl (C))VC(Carbamidomethyl (C))_	REV__DNAH1|p.R3532C|1|0.2|ENSG00000114841|chr3:52393453-52393453|C/T|missense_variant	8.822329726475273	0.7821568878176242	1				NaN	NaN	0	NaN	138	2437	2572
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2578	13.202	NaN	805.02	30	0	202.73	0.035			+	-1	MLTYSSTGL	9	15	494.7353403633561	NaN	0	494.7349548339844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_M(Oxidation (M))LTYSSTGL_	REV__ENST00000332211.10_2_10:76980682-76982077:+|nuORF	7.193352174278301	0.40727630907727536	1				NaN	NaN	0	NaN	139	2437	2572
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2582	13.217	NaN	686.66	30	0	185.01	0.143	+			1311	AETDVLAYD	9	16	498.7289085882406	995.4432642432812	2	498.72900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AETDVLAYD_	ENSG00000005810|ENST00000544440|MYCBP2;MYCBP2|p.N1867Tfs*9|1|0.15|ENSG00000005810|chr13:77171572-77171572|T/-|frameshift_variant;MYCBP2|p.N3049*|1|0.11|ENSG00000005810|chr13:77097894-77097895|TT/-|frameshift_variant;MYCBP2|p.P4047Qfs*26|2|0.35|ENSG00000005810|chr13:77067782-77067782|G/-|frameshift_variant;MYCBP2|p.T1507Ffs*24|1|0.04|ENSG00000005810|chr13:77185189-77185190|-/TTGTAAA|frameshift_variant;MYCBP2|p.T4311Pfs*37|1|0.14|ENSG00000005810|chr13:77059619-77059619|G/-|frameshift_variant;MYCBP2|p.V3749*|1|0.12|ENSG00000005810|chr13:77081486-77081486|C/-|frameshift_variant;nc|ENSG00000005810|O75592-2|MYCBP2	11.511019455917149	0.6112419832031292	1				NaN	NaN	0	NaN	140	2440	2581
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2587	13.235	NaN	2131.9	30	0	505.36	0.147	+			48278	VTDPETHKSTK	11	39	414.8822378956634	1241.6248842871903	3	414.88189697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTDPETHKSTK_	ENSG00000089327|ENST00000392219|FXYD5;ENST00000591716.6_1_19:35651643-35657154:+|nuORF	53.08895987439943	0.38514566451266113	1				NaN	NaN	0	NaN	142	2443	2586
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2595	13.268	NaN	1723.3	30	0	274.97	0.142	+			44905	TVAEKAVKK	9	49	487.3051846609915	NaN	0	487.3055114746094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVAEKAVKK_	ENSG00000101596|ENST00000320876|SMCHD1;ENST00000577300.1_1_18:2703698-2706469:+|nuORF;nc|ENSG00000101596|A6NHR9-2|SMCHD1;SMCHD1|p.D1006Kfs*40|1|0.32|ENSG00000101596|chr18:2729370-2729371|-/AA|frameshift_variant;SMCHD1|p.D1006Tfs*39|2|0.32|ENSG00000101596|chr18:2729371-2729371|A/-|frameshift_variant;SMCHD1|p.G727Rfs*21|1|0.3|ENSG00000101596|chr18:2707832-2707833|-/A|frameshift_variant;SMCHD1|p.M779Wfs*12|1|0.38|ENSG00000101596|chr18:2718226-2718226|A/-|frameshift_variant	70.8162118820467	0.10318768208603292	1				NaN	NaN	0	NaN	144	2449	2594
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2605	13.318	NaN	2240.4	30	0	591.59	0.145				-1	DQRLLPCCK	9	44	566.782881940003	1131.551210946806	2	566.7838745117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_DQRLLPC(Carbamidomethyl (C))CK_	OBSL1|p.R384C|1|0.09|ENSG00000124006|chr2:219568187-219568187|G/A|missense_variant	38.80614096846853	0.43426287593479557	1				NaN	NaN	0	NaN	145	2458	2604
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2616	13.368	NaN	2052.2	30	0	428.46	0.214	+			2880	ASASKGLEK	9	51	445.75032918339696	889.4861054335939	2	445.7502136230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASASKGLEK_	ENSG00000101294|ENST00000398174|HM13;ENST00000335574.9_2_20:30154038-30157019:+|nuORF;ENST00000460389.5_1_20:30136650-30157019:+|nuORF;ENST00000487281.1_1_20:30155508-30157019:+|nuORF;ENST00000492709.5_1_20:30132820-30157019:+|nuORF;nc|ENSG00000101294|Q8TCT9-5|HM13;nc|ENSG00000101294|Q8TCT9|HM13	88.17693792209575	0.07000514020414955	1				NaN	NaN	0	NaN	147	2467	2615
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2617	13.371	NaN	1280.1	30	0	399.16	0.036	+			18023	IILHLSGATK	10	24	351.55322265625	NaN	0	351.55322265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IILHLSGATK_	ENSG00000166342|ENST00000327305|NETO1;nc|ENSG00000166342|Q8TDF5-1|NETO1;nc|ENSG00000166342|Q8TDF5-2|NETO1;NETO1|p.F138Lfs*29|1|0.36|ENSG00000166342|chr18:72858881-72858881|A/-|frameshift_variant	16.473147378115264	0.4201028297492154	1				NaN	NaN	0	NaN	148	2467	2615
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2621	13.386	NaN	1293	30	0	150.81	0.144	+			1229	AEQWQRGKA	9	43	537.2779436124143	NaN	0	537.2775268554688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEQWQRGKA_	ENST00000395254.7_1_10:64136134-64136248:+|nuORF	37.81151784470057	0.28666463014928195	1				NaN	NaN	0	NaN	149	2470	2620
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2625	13.403	NaN	2271.2	30	0	322.85	0.142	+			42601	TATAVAHCK	9	46	479.74194344070895	957.4693339482179	2	479.7422180175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_TATAVAHC(Carbamidomethyl (C))K_	chr19:39435705-39435848|468|276.17|0.0|24.72|-|0|RPS16,RPS16|1;ENSG00000105193|ENST00000251453|RPS16;ENST00000601390.1_1_19:39926180-39926535:-|nuORF	77.31757898189308	0.1091473830098891	1				NaN	NaN	0	NaN	150	2473	2624
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2630	13.42	NaN	6414.7	30	0	721.07	0.214	+			5376	ATYETKESK	9	67	528.7641214896771	1055.5136900461541	2	528.7644653320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATYETKESK_	ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65623404-65625570:-|nuORF;nc|ENSG00000165410|Q9Y281-3|CFL2	90.60085204095205	0.06317133949006545	1				NaN	NaN	0	NaN	152	2476	2629
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2631	13.424	NaN	3741.2	30	0	539.01	0.034	+			6422	AVVSGVHKK	9	51	462.78472372074805	923.5548945082961	2	462.7845153808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVVSGVHKK_	ACTR3B-JMJD1C|1|fusion;ENSG00000171988|ENST00000399262|JMJD1C;nc|ENSG00000171988|Q15652-3|JMJD1C	71.87747018426188	0.13267044672804276	1				NaN	NaN	0	NaN	153	2476	2629
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2636	13.439	NaN	2625.7	30	0	386.81	0.144	+			36741	SGYEVHHQK	9	59	542.7621342936618	1083.5097156541235	2	542.7632446289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SGYEVHHQK_	ENSG00000142192|ENST00000346798|APP;nc|ENSG00000142192|P05067-10|APP;nc|ENSG00000142192|P05067-11|APP;nc|ENSG00000142192|P05067-3|APP;nc|ENSG00000142192|P05067-4|APP;nc|ENSG00000142192|P05067-5|APP;nc|ENSG00000142192|P05067-6|APP;nc|ENSG00000142192|P05067-7|APP;nc|ENSG00000142192|P05067-8|APP;nc|ENSG00000142192|P05067-9|APP	87.69643885390035	0.07135982304947239	1				NaN	NaN	0	NaN	155	2479	2635
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2642	13.458	NaN	4258	30	0	529.5	0.214	+			20065	KEKEQAKQL	9	54	551.316328310168	1100.618103687136	2	551.3164672851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEKEQAKQL_	ENSG00000110844|ENST00000548825|PRPF40B;ENSG00000196504|ENST00000545856|PRPF40A;nc|ENSG00000110844|Q6NWY9-2|PRPF40B;nc|ENSG00000110844|Q6NWY9-3|PRPF40B;nc|ENSG00000110844|Q6NWY9|PRPF40B;nc|ENSG00000196504|O75400-2|PRPF40A;nc|ENSG00000196504|O75400-3|PRPF40A;nc|ENSG00000196504|O75400|PRPF40A	102.0615471778698	0.03709830720253279	1				NaN	NaN	0	NaN	158	2482	2641
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2643	13.461	NaN	1548.2	30	0	533.18	0.035	+			5690	AVEKSINRK	9	40	522.8117069622441	1043.608860991288	2	522.8118896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVEKSINRK_	ENSG00000157181|ENST00000287859|ODR4;nc|ENSG00000157181|Q5SWX8-2|ODR4;nc|ENSG00000157181|Q5SWX8-3|ODR4;nc|ENSG00000157181|Q5SWX8-4|ODR4	51.19269402634007	0.2889735674168909	1				NaN	NaN	0	NaN	159	2482	2641
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2648	13.477	NaN	3417.3	30	0	501.59	0.214			+	20741	KGTTKGLG	8	50	381.229387684715	760.44422243623	2	381.2293701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KGTTKGLG_	REV__ENSG00000114857|ENST00000232978|NKTR;REV__ENST00000487466.5_1_3:42642209-42661208:+|nuORF;REV__NKTR|p.K429Nfs*37|1|0.2|ENSG00000114857|chr3:42636986-42636986|A/-|frameshift_variant;REV__NKTR|p.N670Ifs*43|1|0.14|ENSG00000114857|chr3:42637707-42637707|A/-|frameshift_variant;REV__NKTR|p.R859Kfs*9|1|0.28|ENSG00000114857|chr3:42638271-42638272|-/A|frameshift_variant;REV__NKTR|p.S692Ffs*17|1|0.1|ENSG00000114857|chr3:42637779-42637791|CAAGGAGCAGATC/-|frameshift_variant	65.80317337860623	0.44433089765398776	1				NaN	NaN	0	NaN	161	2485	2647
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2649	13.48	NaN	2612.4	30	0	1151	0.106	+			45936	VARMHEAK	8	35	471.2532352527568	940.4919175723136	2	471.2532653808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VARMHEAK_	SPG7|p.G313R|1|0.31|ENSG00000197912|chr16:89530758-89530758|G/A|missense_variant	38.80614096846853	0.6637206697844082	1				NaN	NaN	0	NaN	162	2485	2647
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2650	13.482	NaN	2464.4	30	0	420.44	0.106	+			6130	AVQDKGSIHK	10	53	541.8011660062091	1081.587779079218	2	541.8018188476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVQDKGSIHK_	ENSG00000178035|ENST00000326739|IMPDH2;ENST00000466147.5_1_3:49062090-49062580:-|nuORF;ENST00000484872.1_1_3:49061926-49062670:-|nuORF	56.43379154798735	0.3982744522255666	1				NaN	NaN	0	NaN	163	2485	2647
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2651	13.484	NaN	2056.4	30	0	1233.9	0.106	+			36645	SGLFKTHRR	9	28	367.8801406327926	1100.6185924985778	3	367.88037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SGLFKTHRR_	ENST00000375608.7_2_13:113548693-113669133:+|nuORF	30.503639358989545	0.5181749237905803	1				NaN	NaN	0	NaN	164	2485	2647
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2652	13.486	NaN	1008	30	0	212.91	0.035			+	50579	YCMTLASQV	9	26	508.23518366264784	NaN	0	508.23480224609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YCMTLASQV_	REV__ENST00000356721.3_1_16:48396017-48396254:-|nuORF	23.04248740728303	0.3589936788096251	1				NaN	NaN	0	NaN	165	2485	2647
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2656	13.5	NaN	966.64	30	0	165.8	0.214	+			46392	VELQAGAGGPG	11	20	478.2467169513431	NaN	0	478.24639892578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VELQAGAGGPG_	ENSG00000037757|ENST00000040663|MRI1;ENST00000588526.5_1_19:13875372-13879175:+|nuORF;ENST00000589290.1_1_19:13875402-13879305:+|nuORF;ENST00000591688.5_1_19:13875372-13879601:+|nuORF;MRI1|p.H330Tfs*24|4|0.35|ENSG00000037757|chr19:13772154-13772154|C/-|frameshift_variant;nc|ENSG00000037757|Q9BV20-2|MRI1	14.137123925751023	0.456735970842152	1				NaN	NaN	0	NaN	166	2488	2655
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2657	13.504	NaN	2330.2	30	0	428.03	0.037	+			22228	KSYDQVHSGK	10	50	574.7880997136829	1147.5616464941656	2	574.789306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KSYDQVHSGK_	ACOX1|p.N501Tfs*6|1|0.47|ENSG00000161533|chr17:75949577-75949577|T/-|frameshift_variant;ENSG00000161533|ENST00000293217|ACOX1;nc|ENSG00000161533|Q15067-3|ACOX1;nc|ENSG00000161533|Q15067|ACOX1	82.83050618871818	0.17249597090446123	1				NaN	NaN	0	NaN	167	2488	2655
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2662	13.519	NaN	2863.6	30	0	636.98	0.214	+			4720	ATMATSGSARK	11	59	540.7769851491072	1079.5394173650143	2	541.2789916992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATMATSGSARK_	ENSG00000141543|ENST00000649764|EIF4A3;ENST00000575957.1_1_17:78115565-78120760:-|nuORF	91.26522074875469	0.0935951923676557	1				NaN	NaN	0	NaN	169	2491	2661
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2663	13.523	NaN	1336.7	30	0	213.54	0.034			+	6246	AVSGALAGGRL	11	45	486.2850590819583	970.5555652307166	2	486.7872009277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVSGALAGGRL_	REV__ENST00000409687.4_1_9:139957783-139958401:-|nuORF	42.86426827375447	0.5187511139693657	1				NaN	NaN	0	NaN	170	2491	2661
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2668	13.538	NaN	7894	30	0	903.61	0.214	+			3905	ATARPRPVK	9	53	332.5416695348548	NaN	0	332.5417785644531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATARPRPVK_	ENSG00000170892|ENST00000396388|TSEN34	40.77816245573522	0.2702456086868081	1				NaN	NaN	0	NaN	172	2494	2667
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2669	13.542	NaN	1331.8	30	0	178.47	0.034	+			41643	SVQTKAVNK	9	50	487.78439344126724	973.5542339493345	2	487.78460693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVQTKAVNK_	ENSG00000119285|ENST00000366582|HEATR1;HEATR1|p.H353Pfs*16|1|0.31|ENSG00000119285|chr1:236595572-236595573|-/G|frameshift_variant;HEATR1|p.M758Dfs*47|1|0.08|ENSG00000119285|chr1:236583167-236583168|-/G|frameshift_variant	61.691277971877994	0.19951612995419254	1				NaN	NaN	0	NaN	173	2494	2667
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2673	13.556	NaN	2892.2	30	0	459.78	0.214	+			41645	SVQTKTIKK	9	62	516.8243897927135	1031.634226652227	2	516.824462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVQTKTIKK_	ENSG00000069869|ENST00000435532|NEDD4;ENST00000513957.1_1_15:56216842-56258681:-|nuORF	109.47833844074708	0.029530294723441826	1				NaN	NaN	0	NaN	174	2497	2672
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2674	13.56	NaN	839.12	30	0	277.81	0.106				-1	SEKRKVIC	8	22	510.288330078125	NaN	0	510.288330078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SEKRKVIC(Carbamidomethyl (C))_	DYNC2LI1|p.I230Yfs*38|1|0.29|ENSG00000138036|chr2:43800870-43800870|A/-|frameshift_variant;ENSG00000138036|ENST00000260605|DYNC2LI1;nc|ENSG00000138036|Q8TCX1-2|DYNC2LI1;nc|ENSG00000138036|Q8TCX1-3|DYNC2LI1	13.775330524044264	1.7418937515398478	1				NaN	NaN	0	NaN	175	2497	2672
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2675	13.562	NaN	2695.9	30	0	222.73	0.038			+	-1	TMGKLVQPLMV	11	54	624.8382478986306	1247.661942864061	2	624.838134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Oxidation (M)	_TM(Oxidation (M))GKLVQPLM(Oxidation (M))V_	REV__ENSG00000116062|ENST00000234420|MSH6;REV__MSH6|p.F882Lfs*24|1|0.31|ENSG00000116062|chr2:47800626-47800626|T/-|frameshift_variant;REV__MSH6|p.G1105Wfs*3|2|0.25|ENSG00000116062|chr2:47803552-47803553|-/T|frameshift_variant;REV__nc|ENSG00000116062|P52701-2|MSH6;REV__nc|ENSG00000116062|P52701-3|MSH6;REV__nc|ENSG00000116062|P52701-4|MSH6	40.77816245573522	0.5472954108598816	1				NaN	NaN	0	NaN	176	2497	2672
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2682	13.581	NaN	962.11	30	0	161.15	0.143				-1	KLHPLMAR	8	16	491.28719078794984	NaN	0	491.28704833984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_KLHPLM(Oxidation (M))AR_	ENSG00000095539|ENST00000210633|SEMA4G;nc|ENSG00000095539|Q9NTN9-3|SEMA4G;nc|ENSG00000095539|Q9NTN9|SEMA4G	8.822329726475273	1.7418937515398478	1				NaN	NaN	0	NaN	180	2500	2681
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2688	13.598	NaN	1298.7	30	0	468.4	0.143			+	31389	QKILVDLR	8	40	492.8134129208784	983.6122729085569	2	492.8136901855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QKILVDLR_	REV__nc|ENSG00000138750|Q7Z3B4-2|NUP54	44.116797842482775	0.6307669463330267	1				NaN	NaN	0	NaN	183	2503	2687
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2692	13.614	NaN	1515.3	30	0	224.08	0.142	+			26353	LTAKPSHSK	9	36	484.77924135838214	967.5439297835643	2	484.77923583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LTAKPSHSK_	ENST00000579925.5_1_17:56586124-56586178:-|nuORF	42.396135135203025	0.392153681582562	1				NaN	NaN	0	NaN	184	2506	2691
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2700	13.648	NaN	1281.1	30	0	352.3	0.214	+			15171	GTSGPHVGK	9	35	420.2219964772785	838.429440021357	2	420.2220458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTSGPHVGK_	ENSG00000111859|ENST00000379446|NEDD9;ENST00000448183.6_1_6:11200558-11306280:-|nuORF;nc|ENSG00000111859|Q14511-2|NEDD9;nc|ENSG00000111859|Q14511-3|NEDD9;NEDD9|p.P245Lfs*3|2|0.37|ENSG00000111859|chr6:11191135-11191135|G/-|frameshift_variant	45.97224482568171	0.3502073465782774	1				NaN	NaN	0	NaN	186	2512	2699
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2701	13.652	NaN	2893.8	30	0	717.84	0.035			+	21492	KNKSIKGIP	9	34	328.87795218098614	983.6120271431585	3	328.8779602050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KNKSIKGIP_	REV__ENSG00000135250|ENST00000393651|SRPK2;REV__nc|ENSG00000135250|P78362|SRPK2;REV__SRPK2|p.Q368Sfs*16|1|0.04|ENSG00000135250|chr7:105142416-105142417|-/AGGA|frameshift_variant;REV__SRPK2|p.V366Ifs*7|1|0.02|ENSG00000135250|chr7:105142419-105142422|CTAC/-|frameshift_variant	12.206847966760668	0.6112419832031292	1				NaN	NaN	0	NaN	187	2512	2699
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2711	13.685	NaN	2339.2	30	0	553.28	0.145	+			48364	VTHEGSTVEK	10	45	362.8519780251279	1085.5341046755836	3	362.8522033691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTHEGSTVEK_	nc|ENSG00000211675|P0CG04|IGLC1;nc|ENSG00000211677|P0DOY2|IGLC2;nc|ENSG00000211679|P0DOY3|IGLC3;nc|ENSG00000211685|A0M8Q6|IGLC7;nc|ENSG00000222037|P0CF74|IGLC6;nc|ENSG00000254709|B9A064|IGLL5	34.08650109265054	0.601467140718965	1				NaN	NaN	0	NaN	191	2518	2710
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2717	13.702	NaN	4125.5	30	0	346.11	0.214	+			34237	RTGKVTVEK	9	58	339.87312640662094	1016.5975498200628	3	339.8732604980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTGKVTVEK_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	55.08391021199286	0.2545954270840753	1				NaN	NaN	0	NaN	194	2521	2716
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2718	13.706	NaN	1961.1	30	0	373.92	0.106	+			28500	NHFVNTNLTQ	10	40	594.2936788044844	1186.5728046757688	2	594.2933349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NHFVNTNLTQ_	tr|U7SU67|U7SU67_FUSNUNon-specificserine/threonineproteinkinaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01120PE=4SV=1	42.86426827375447	0.522752283233888	1				NaN	NaN	0	NaN	195	2521	2716
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2719	13.708	NaN	1240.9	30	0	655.99	0.035				-1	YMSLALLSK	9	21	521.285340079194	1040.556127225188	2	521.2844848632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_YM(Oxidation (M))SLALLSK_	ENST00000486048.2_1_1:151204736-151206704:+|nuORF	12.206847966760668	0.6112419832031292	1				NaN	NaN	0	NaN	196	2521	2716
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2726	13.739	NaN	4862.3	30	0	758.55	0.142	+			40333	STTASLSKK	9	56	461.76377716585796	921.5130013985159	2	461.76336669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STTASLSKK_	ENSG00000143363|ENST00000271620|PRUNE1;nc|ENSG00000143363|Q86TP1-2|PRUNE1;nc|ENSG00000143363|Q86TP1-3|PRUNE1;nc|ENSG00000143363|Q86TP1-4|PRUNE1;nc|ENSG00000143363|Q86TP1-5|PRUNE1;nc|ENSG00000143363|Q86TP1-6|PRUNE1;nc|ENSG00000143363|Q86TP1-7|PRUNE1	69.6276240434122	0.14239879520340665	1				NaN	NaN	0	NaN	197	2527	2725
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2730	13.755	NaN	2850.1	30	0	553.46	0.214	+			49292	VVQKKIAEK	9	55	521.8343668588276	1041.654180784455	2	521.8345336914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVQKKIAEK_	ENSG00000171045|ENST00000524325|TSNARE1;ENST00000518928.1_1_8:143381726-143407541:-|nuORF;nc|ENSG00000171045|Q96NA8-2|TSNARE1	95.81516180277367	0.04847050768394289	1				NaN	NaN	0	NaN	198	2530	2729
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2731	13.759	NaN	1987.8	30	0	318.29	0.106	+			49300	VVQQQKLKK	9	51	549.8534394772917	NaN	0	549.8541259765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVQQQKLKK_	ENSG00000104979|ENST00000588234|C19orf53	58.78195531508484	0.1545138866451181	1				NaN	NaN	0	NaN	199	2530	2729
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2732	13.761	NaN	484.1	30	0	89.626	0.032	+			29376	PALAHGRA	8	26	396.72740947842647	NaN	0	396.7273254394531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PALAHGRA_	SP5|p.L264Pfs*118|1|0.23|ENSG00000204335|chr2:170716991-170716992|-/C|frameshift_variant	21.70233525837049	1.7418937515398478	1				NaN	NaN	0	NaN	200	2530	2729
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2738	13.777	NaN	2691.9	30	0	285.69	0.214	+			25829	LSDQTKEKE	9	57	539.2745291939395	1076.534505454679	2	539.2749633789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSDQTKEKE_	ENSG00000106028|ENST00000265304|SSBP1	104.01359247289065	0.03510646158778409	1				NaN	NaN	0	NaN	203	2533	2737
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2739	13.78	NaN	6578.6	30	0	1110.4	0.106	+			16458	HETEQKRL	8	55	347.5207879602767	1039.5405344810301	3	347.5207824707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HETEQKRL_	ENSG00000139644|ENST00000267115|TMBIM6;ENST00000553022.1_1_12:50146843-50152319:+|nuORF;nc|ENSG00000139644|P55061-2|TMBIM6	40.5726180659479	0.6527593143185008	1				NaN	NaN	0	NaN	204	2533	2737
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2740	13.782	NaN	1494.3	30	0	337.84	0.106			+	32128	QSLHLQWNQ	9	33	577.29296875	NaN	0	577.29296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QSLHLQWNQ_	REV__ENST00000373115.4_1_10:73772609-73772870:+|nuORF	35.15202426646627	0.3000918603816441	1				NaN	NaN	0	NaN	205	2533	2737
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2741	13.784	NaN	2779.3	30	0	516.95	0.106				-1	ASKKCLSQA	9	53	496.76247400712214	NaN	0	496.7729187011719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_ASKKC(Carbamidomethyl (C))LSQA_	ENST00000473270.1_1_9:33016115-33025020:-|nuORF	45.97224482568171	0.23445038899310136	1				NaN	NaN	0	NaN	206	2533	2737
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2742	13.786	NaN	1189.2	30	0	753.55	0.106			+	18472	ISFGYGGY	8	12	432.2010137067198	862.3874744802396	2	432.70269775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ISFGYGGY_	REV__ENSG00000186967|ENST00000334058|KRTAP19-4	4.6817480819748125	0.7764044737779935	1				NaN	NaN	0	NaN	207	2533	2737
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2743	13.788	NaN	1530.9	30	0	282.11	0.106			+	-1	KCQAHYYK	8	42	549.264892578125	NaN	0	549.264892578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_KC(Carbamidomethyl (C))QAHYYK_	REV__ENST00000519169.5_1_8:131191508-131249207:-|nuORF	33.51558372728122	1.7418937515398478	1				NaN	NaN	0	NaN	208	2533	2737
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2744	13.79	NaN	1714.7	30	0	548.66	0.035			+	-1	ATCKKCKR	8	31	332.1804504394531	NaN	0	332.1804504394531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_ATC(Carbamidomethyl (C))KKCKR_	REV__ENST00000378487.2_1_12:92813988-92814823:-|nuORF	37.15910966729921	1.7418937515398478	1				NaN	NaN	0	NaN	209	2533	2737
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2752	13.808	NaN	4291.7	30	0	422	0.214	+			38403	SSAASSLKK	9	56	439.75045614906594	877.4863593649319	2	439.7504577636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSAASSLKK_	ARID1A|p.F2141Sfs*59|5|0.26|ENSG00000117713|chr1:26780313-26780313|C/-|frameshift_variant;ARID1A|p.K1161Sfs*19|1|0.29|ENSG00000117713|chr1:26772573-26772573|A/-|frameshift_variant;ARID1A|p.M1564Hfs*8|1|0.18|ENSG00000117713|chr1:26774910-26774911|-/C|frameshift_variant;ARID1A|p.N1475Tfs*6|1|0.36|ENSG00000117713|chr1:26774648-26774648|A/-|frameshift_variant;ARID1A|p.P1115Qfs*46|1|0.32|ENSG00000117713|chr1:26771260-26771260|C/-|frameshift_variant;ARID1A|p.P1326Rfs*155|1|0.15|ENSG00000117713|chr1:26773685-26773685|C/-|frameshift_variant;ARID1A|p.P1406Rfs*37|1|0.42|ENSG00000117713|chr1:26774444-26774448|CCCCA/-|frameshift_variant;ARID1A|p.P1568Lfs*44|1|0.14|ENSG00000117713|chr1:26774926-26774926|C/-|frameshift_variant;ARID1A|p.P1575Hfs*37|1|0.38|ENSG00000117713|chr1:26774947-26774947|C/-|frameshift_variant;ARID1A|p.P2114Rfs*21|1|0.46|ENSG00000117713|chr1:26780236-26780236|C/-|frameshift_variant;ARID1A|p.V2244Gfs*34|1|0.31|ENSG00000117713|chr1:26780626-26780627|-/G|frameshift_variant;ENSG00000049618|ENST00000636930|ARID1B;ENSG00000117713|ENST00000324856|ARID1A;nc|ENSG00000049618|Q8NFD5-1|ARID1B;nc|ENSG00000049618|Q8NFD5-2|ARID1B;nc|ENSG00000049618|Q8NFD5|ARID1B;nc|ENSG00000117713|O14497-2|ARID1A;nc|ENSG00000117713|O14497-3|ARID1A	110.11987700582712	0.028875675806141952	1				NaN	NaN	0	NaN	214	2536	2751
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2753	13.811	NaN	2549.3	30	0	569.37	0.106			+	14761	GTKNTAICK	9	52	496.76247400712214	NaN	0	496.27459716796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GTKNTAIC(Carbamidomethyl (C))K_	REV__ENSG00000138347|ENST00000358913|MYPN;REV__nc|ENSG00000138347|Q86TC9-2|MYPN	54.776311868738084	0.17377682019723872	1				NaN	NaN	0	NaN	215	2536	2751
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2754	13.813	NaN	2950.6	30	0	371.17	0.106	+			49216	VVNDAGRPK	9	51	478.2693657836861	NaN	0	478.2693176269531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVNDAGRPK_	ENSG00000109971|ENST00000534624|HSPA8;ENST00000508840.1_1_8:30095113-30095479:+|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;HSPA8|p.K569Dfs*6|1|0.3|ENSG00000109971|chr11:123058302-123058303|TC/-|frameshift_variant;nc|ENSG00000109971|P11142-2|HSPA8	77.31757898189308	0.08057531075035683	1				NaN	NaN	0	NaN	216	2536	2751
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2755	13.815	NaN	2667.5	30	0	336.24	0.106	+			41440	SVNKASTVTK	10	59	517.7957157809153	1033.5768786286305	2	517.7957763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVNKASTVTK_	ENSG00000039523|ENST00000042381|RIPOR1;ENST00000569733.6_1_16:67575293-67580037:+|nuORF;nc|ENSG00000039523|Q6ZS17-3|RIPOR1;nc|ENSG00000039523|Q6ZS17-4|RIPOR1;nc|ENSG00000039523|Q6ZS17|RIPOR1	91.26522074875469	0.12383023862516404	1				NaN	NaN	0	NaN	217	2536	2751
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2756	13.817	NaN	2317.6	30	0	658.74	0.106			+	29606	PFSSTPCTFHK	11	30	626.2950439453125	NaN	0	626.2950439453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PFSSTPCTFHK_	REV__ENSG00000095383|ENST00000465784|TBC1D2;REV__nc|ENSG00000095383|Q9BYX2-2|TBC1D2;REV__nc|ENSG00000095383|Q9BYX2-3|TBC1D2;REV__nc|ENSG00000095383|Q9BYX2-4|TBC1D2;REV__nc|ENSG00000095383|Q9BYX2-5|TBC1D2;REV__nc|ENSG00000095383|Q9BYX2-6|TBC1D2	23.52269567125451	0.456735970842152	1				NaN	NaN	0	NaN	218	2536	2751
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2757	13.819	NaN	1359.2	30	0	183.1	0.106	+			48954	VVFLLSNDV	9	44	503.2840270996094	NaN	0	503.2840270996094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VVFLLSNDV_	ENSG00000056736|ENST00000288167|IL17RB;ENST00000475124.1_1_3:53892553-53899332:+|nuORF	37.15910966729921	0.2899585034171616	1				NaN	NaN	0	NaN	219	2536	2751
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2758	13.82	NaN	3117.3	30	0	839.71	0.036			+	-1	ELHKRTMQ	8	29	529.7750884101298	1057.5356238870595	2	529.7749633789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_ELHKRTM(Oxidation (M))Q_	REV__ENSG00000079101|ENST00000692774|CLUL1	12.206847966760668	0.7875100812264838	1				NaN	NaN	0	NaN	220	2536	2751
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2764	13.837	NaN	1688.1	30	0	280.58	0.144	+			38240	SQMKIVHKK	9	47	549.826416015625	NaN	0	549.826416015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SQMKIVHKK_	ENSG00000189266|ENST00000334351|PNRC2	42.33807565288922	0.25949540651090086	1				NaN	NaN	0	NaN	223	2539	2763
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2770	13.854	NaN	2113.5	30	0	449.28	0.214	+			2862	ASAPLHQNK	9	44	483.2613992167724	964.5082455003449	2	483.2619934082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASAPLHQNK_	ENSG00000123178|ENST00000361840|SPRYD7	88.17693792209575	0.07000514020414955	1				NaN	NaN	0	NaN	226	2542	2769
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2771	13.858	NaN	2252.3	30	0	404.35	0.106	+			40166	STQSKVMNK	9	63	511.76881550796145	1021.5230780827229	2	512.2709350585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STQSKVMNK_	ENSG00000165113|ENST00000376371|GKAP1;nc|ENSG00000165113|Q5VSY0-2|GKAP1	61.691277971877994	0.19951612995419254	1				NaN	NaN	0	NaN	227	2542	2769
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2772	13.86	NaN	1096.9	30	0	193.16	0.035	+			41027	SVIAERNKK	9	41	522.8121948242188	NaN	0	522.8121948242188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVIAERNKK_	ENSG00000012779|ENST00000374391|ALOX5;nc|ENSG00000012779|P09917-2|ALOX5;nc|ENSG00000012779|P09917-3|ALOX5	22.579656572578934	0.3605601358598771	1				NaN	NaN	0	NaN	228	2542	2769
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2777	13.874	NaN	6987.1	30	0	2137.6	0.214	+			15092	GTQIHKVCK	9	67	535.792371012121	1069.5701890910418	2	535.7930297851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GTQIHKVC(Carbamidomethyl (C))K_	ENST00000594085.5_1_19:40854624-40871501:+|nuORF	98.62937762414208	0.04060045538121712	1				NaN	NaN	0	NaN	230	2545	2776
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2778	13.878	NaN	5862.9	30	0	4663.5	0.106	+			10230	ETIALEKEQK	10	30	396.8875080645936	1187.6406947939809	3	396.88763427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ETIALEKEQK_	CUX1|p.A591Qfs*9|1|0.06|ENSG00000257923|chr7:102197181-102197182|-/CAGT|frameshift_variant;CUX1|p.E933Sfs*59|1|0.14|ENSG00000257923|chr7:102202089-102202089|C/-|frameshift_variant;CUX1|p.I1081Sfs*39|2|0.46|ENSG00000257923|chr7:102227471-102227471|C/-|frameshift_variant;ENSG00000257923|ENST00000292535|CUX1;ENST00000465461.6_1_7:101747665-101768865:+|nuORF;ENST00000497815.5_1_7:101459310-101755188:+|nuORF;ENST00000558836.5_1_7:101575863-101926379:+|nuORF;ENST00000560541.5_1_7:101556607-101926379:+|nuORF;nc|ENSG00000257923|P39880-2|CUX1;nc|ENSG00000257923|P39880-3|CUX1;nc|ENSG00000257923|P39880-4|CUX1;nc|ENSG00000257923|P39880-5|CUX1;nc|ENSG00000257923|P39880-6|CUX1;nc|ENSG00000257923|P39880-9|CUX1;nc|ENSG00000257923|Q13948-10|CUX1;nc|ENSG00000257923|Q13948-2|CUX1;nc|ENSG00000257923|Q13948-9|CUX1;nc|ENSG00000257923|Q13948|CUX1	21.68575002086885	0.7027366847906487	1				NaN	NaN	0	NaN	231	2545	2776
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2779	13.88	NaN	3723.5	30	0	668.47	0.106	+			10367	ETYNKRHLK	9	46	594.8276327169922	1187.6407125007843	2	594.8273315429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ETYNKRHLK_	ENST00000299505.6_1_19:34745491-34790780:+|nuORF;ENST00000592124.1_1_19:34756504-34790780:+|nuORF	45.02220120713402	0.3613509778819777	1				NaN	NaN	0	NaN	232	2545	2776
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2780	13.882	NaN	2156.2	30	0	394.57	0.106	+			44566	TTASQTNIKK	10	51	546.3061171803095	1090.5976814274188	2	546.306396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TTASQTNIKK_	ENSG00000225921|ENST00000451315|NOL7;nc|ENSG00000225921|Q9UMY1-2|NOL7;NOL7|p.K238Nfs*16|1|0.31|ENSG00000225921|chr6:13620760-13620760|A/-|frameshift_variant;NOL7|p.N240Mfs*14|1|0.23|ENSG00000225921|chr6:13620769-13620769|A/-|frameshift_variant	27.047317107675042	0.6589519614906109	1				NaN	NaN	0	NaN	233	2545	2776
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2781	13.883	NaN	1349.5	30	0	179.14	0.106	+			3405	ASQGEVVRK	9	39	487.27459977476	972.5346466163201	2	487.2747802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASQGEVVRK_	ENSG00000136628|ENST00000366923|EPRS1	41.42661286455405	0.403525789677298	1				NaN	NaN	0	NaN	234	2545	2776
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2782	13.885	NaN	703.56	30	0	175.82	0.038				-1	KMKKLFLCS	9	25	390.8843059990164	1169.6310885972493	3	390.8842468261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),Oxidation (M)	_KM(Oxidation (M))KKLFLC(Carbamidomethyl (C))S_	tr|U7SS12|U7SS12_FUSNUDipeptidaseEOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01503PE=3SV=1	14.864876125193954	0.6112419832031293	1				NaN	NaN	0	NaN	235	2545	2776
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2787	13.9	NaN	2375.2	30	0	591.87	0.214	+			6186	AVQPAPTRK	9	39	484.2872390209978	966.5599251087956	2	484.2873840332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVQPAPTRK_	ENSG00000109686|ENST00000604030|SH3D19;ENST00000478503.6_1_4:152043245-152086876:-|nuORF;nc|ENSG00000109686|Q5HYK7-2|SH3D19;nc|ENSG00000109686|Q5HYK7|SH3D19	44.377184641726394	0.36891676396732553	1				NaN	NaN	0	NaN	237	2548	2786
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2788	13.903	NaN	3226	30	0	687.91	0.106	+			35542	SAVPPTKEK	9	53	478.773271524946	955.531990116692	2	478.7735595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAVPPTKEK_	ENSG00000131503|ENST00000360839|ANKHD1;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	41.42661286455405	0.403525789677298	1				NaN	NaN	0	NaN	238	2548	2786
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2789	13.905	NaN	1940.3	30	0	528.35	0.106	+			5336	ATVPMSKKK	9	50	495.29436538574924	988.5741778382985	2	495.2944030761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATVPMSKKK_	ENSG00000100023|ENST00000398831|PPIL2;ENST00000462188.1_1_22:22049506-22049776:+|nuORF	37.81151784470057	0.4459294069877048	1				NaN	NaN	0	NaN	239	2548	2786
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2790	13.907	NaN	1108.4	30	0	194.33	0.106	+			19808	KEDEKKQEL	9	33	573.8039506776787	NaN	0	573.8043212890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEDEKKQEL_	ENSG00000138640|ENST00000264344|FAM13A;ENST00000508360.5_1_4:89653076-89671014:-|nuORF;ENST00000511573.5_1_4:89649686-89680064:-|nuORF;nc|ENSG00000138640|O94988-1|FAM13A;nc|ENSG00000138640|O94988-3|FAM13A;nc|ENSG00000138640|O94988-5|FAM13A;nc|ENSG00000138640|O94988-6|FAM13A	49.536043120802724	0.20989033510253738	1				NaN	NaN	0	NaN	240	2548	2786
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2791	13.909	NaN	1526.7	30	0	278.66	0.038			+	9553	ELERRNMHR	9	33	620.8180230440108	NaN	0	620.8187255859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ELERRNMHR_	REV__KIF13A|p.P14H|1|0.38|ENSG00000137177|chr6:17987423-17987423|G/T|missense_variant	16.71738777980365	0.38040106172814914	1				NaN	NaN	0	NaN	241	2548	2786
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2797	13.925	NaN	2665.7	30	0	404.07	0.214	+			54	AAAQNAIKK	9	63	457.77433414142905	913.5341153496581	2	457.77423095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAAQNAIKK_	ENSG00000137076|ENST00000314888|TLN1;ENSG00000171914|ENST00000636159|TLN2;nc|ENSG00000137076|Q9Y490-2|TLN1;TLN1|p.P1628Rfs*20|1|0.44|ENSG00000137076|chr9:35707144-35707144|G/-|frameshift_variant	85.35947970620816	0.07794846947388434	1				NaN	NaN	0	NaN	244	2551	2796
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2798	13.928	NaN	2980.9	30	0	337.91	0.106	+			2239	ALSSSSIRVA	10	57	495.78238435458223	989.5502157759645	2	495.78216552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ALSSSSIRVA_	ENSG00000015676|ENST00000355451|NUDCD3	47.657333605630114	0.47858658696240314	1				NaN	NaN	0	NaN	245	2551	2796
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2799	13.93	NaN	1325.5	30	0	173.37	0.106	+			7694	DLLIPVGVMQ	10	23	542.8070006188228	NaN	0	542.8070678710938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DLLIPVGVMQ_	ENSG00000130827|ENST00000369682|PLXNA3	15.641811463095205	0.4201028297492154	1				NaN	NaN	0	NaN	246	2551	2796
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2800	13.932	NaN	1829.5	30	0	708.82	0.035			+	-1	KQTHELMM	8	29	517.2436458641878	1032.4727387951755	2	517.2450561523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_KQTHELMM(Oxidation (M))_	REV__ENSG00000183347|ENST00000370456|GBP6;REV__GBP6|p.N587Kfs*2|1|0.28|ENSG00000183347|chr1:89385321-89385322|-/A|frameshift_variant;REV__GBP6|p.N587Mfs*18|2|0.17|ENSG00000183347|chr1:89385322-89385322|A/-|frameshift_variant;REV__nc|ENSG00000183347|Q6ZN66-2|GBP6	17.364965105453717	0.7956685240855921	1				NaN	NaN	0	NaN	247	2551	2796
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2806	13.948	NaN	6713.2	30	0	1879.5	0.143	+			34206	RTDTASRLK	9	57	524.2991199623556	1046.583686991511	2	524.2996826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTDTASRLK_	ENSG00000054654|ENST00000555002|SYNE2;ENST00000394768.6_2_14:64542710-64692241:+|nuORF;ENST00000554805.6_2_14:64676062-64692241:+|nuORF;ENST00000555022.5_2_14:64671104-64692241:+|nuORF;nc|ENSG00000054654|Q8WXH0-13|SYNE2;nc|ENSG00000054654|Q8WXH0-3|SYNE2;nc|ENSG00000054654|Q8WXH0-4|SYNE2;nc|ENSG00000054654|Q8WXH0-7|SYNE2;nc|ENSG00000054654|Q8WXH0|SYNE2;SYNE2|p.S6651Rfs*83|1|0.29|ENSG00000054654|chr14:64220596-64220597|-/G|frameshift_variant	72.87924865735499	0.12833875048249987	1				NaN	NaN	0	NaN	250	2554	2805
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2810	13.964	NaN	3719.8	30	0	442.38	0.214	+			3770	ATAEQACKEK	10	71	539.7632202796459	1077.5118876260917	2	539.7637329101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATAEQACKEK_	ENSG00000125844|ENST00000377813|RRBP1;nc|ENSG00000125844|Q9P2E9-3|RRBP1;RRBP1|p.A628Gfs*69|1|0.35|ENSG00000125844|chr20:17621915-17621916|-/T|frameshift_variant	128.60217544463768	0.01518043149187549	1				NaN	NaN	0	NaN	251	2557	2809
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2811	13.968	NaN	1612.4	30	0	269.23	0.034	+			5978	AVLQAHHAK	9	50	487.7793124926669	973.5440720521339	2	487.77911376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVLQAHHAK_	ENSG00000090621|ENST00000372858|PABPC4;ENST00000549280.1_1_12:60205892-60206354:+|nuORF;nc|ENSG00000090621|Q13310-2|PABPC4;nc|ENSG00000090621|Q13310|PABPC4	71.29570347882199	0.13518600952103718	1				NaN	NaN	0	NaN	252	2557	2809
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2815	13.983	NaN	2520.6	30	0	347.31	0.214	+			44547	TTAEGMAKK	9	52	468.7440128766548	NaN	0	468.7440490722656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTAEGMAKK_	ENSG00000184897|ENST00000333762|H1-10	113.41158876095287	0.006616183131571386	1				NaN	NaN	0	NaN	253	2560	2814
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2816	13.986	NaN	2012.3	30	0	459.05	0.034	+			4388	ATHLVTKAK	9	47	484.7974846770377	967.5804164208754	2	484.7973327636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATHLVTKAK_	ENSG00000160584|ENST00000445177|SIK3;ENST00000485363.1_1_11:116775672-116969011:-|nuORF;nc|ENSG00000160584|Q9Y2K2-7|SIK3;nc|ENSG00000160584|Q9Y2K2-8|SIK3;nc|ENSG00000160584|Q9Y2K2|SIK3;SIK3|p.F285Lfs*9|1|0.33|ENSG00000160584|chr11:116896263-116896263|A/-|frameshift_variant	72.87924865735499	0.12833875048249987	1				NaN	NaN	0	NaN	254	2560	2814
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2828	14.024	NaN	7216.6	30	0	1278.7	0.214	+			41089	SVINNSHNK	9	68	506.76198677411196	1011.5094206150239	2	506.7619934082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVINNSHNK_	ENSG00000121892|ENST00000303538|PDS5A;nc|ENSG00000121892|Q29RF7-3|PDS5A	147.73206827945663	0.0073977474511673896	1				NaN	NaN	0	NaN	260	2566	2827
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2829	14.027	NaN	806.07	30	0	189.61	0.034			+	41012	SVGSPQVLQ	9	39	457.75060847474964	913.4866640162993	2	457.74981689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVGSPQVLQ_	REV__ENST00000566132.5_1_15:75192466-75194403:-|nuORF	62.107414245175825	0.1960472003779324	1				NaN	NaN	0	NaN	261	2566	2827
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2834	14.042	NaN	2194.9	30	0	441.11	0.145	+			7623	DKGSSSHNKPK	11	63	592.8045119883598	1183.5944710435194	2	592.8047485351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DKGSSSHNKPK_	CYLD|p.I702*|1|0.1|ENSG00000083799|chr16:50787844-50787844|A/-|frameshift_variant;CYLD|p.N722Mfs*13|3|0.37|ENSG00000083799|chr16:50791608-50791608|A/-|frameshift_variant;CYLD|p.T340Nfs*11|1|0.11|ENSG00000083799|chr16:50776272-50776273|-/AAAT|frameshift_variant;ENSG00000083799|ENST00000427738|CYLD;ENST00000563629.1_1_16:50783909-50820919:+|nuORF;ENST00000563976.1_1_16:50810130-50811860:+|nuORF;ENST00000569891.5_1_16:50783609-50818363:+|nuORF;nc|ENSG00000083799|Q9NQC7-2|CYLD	59.93077597824379	0.32407304095777845	1				NaN	NaN	0	NaN	263	2569	2833
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2840	14.059	NaN	2676.9	30	0	993.46	0.214			+	37634	SLQHLRLQ	8	36	332.19784687432906	NaN	0	332.5318298339844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLQHLRLQ_	REV__ENST00000466105.5_1_10:86211989-86232805:+|nuORF	33.51558372728122	1.7418937515398478	1				NaN	NaN	0	NaN	266	2572	2839
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2841	14.063	NaN	1684.6	30	0	504.74	0.106			+	-1	FAAPVWCW	8	40	518.7409552036573	1035.4673574741146	2	518.7420654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_FAAPVWC(Carbamidomethyl (C))W_	REV__ENST00000245817.4_1_19:6535089-6535281:+|nuORF	24.504012794735996	0.7701314986472447	1				NaN	NaN	0	NaN	267	2572	2839
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2842	14.065	NaN	1949.7	30	0	243.73	0.033	+			45701	VAAKPVATK	9	53	442.78175318059675	883.5489534279935	2	442.78253173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VAAKPVATK_	COL6A3|p.A2956Lfs*45|1|0.33|ENSG00000163359|chr2:237336234-237336234|C/-|frameshift_variant;COL6A3|p.A2957Lfs*44|1|0.33|ENSG00000163359|chr2:237336232-237336232|A/-|frameshift_variant;COL6A3|p.G3016Vfs*19|1|0.34|ENSG00000163359|chr2:237334810-237334810|G/-|frameshift_variant;ENSG00000163359|ENST00000295550|COL6A3;ENST00000491769.1_1_2:238233419-238250825:-|nuORF;nc|ENSG00000163359|P12111-2|COL6A3;nc|ENSG00000163359|P12111-4|COL6A3	109.47833844074708	0.029530294723441826	1				NaN	NaN	0	NaN	268	2572	2839
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2847	14.08	NaN	2333.2	30	0	695.92	0.146			+	49515	VWWGWIWR	8	37	594.809390325933	1187.604227718666	2	594.8095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VWWGWIWR_	REV__ENST00000531086.1_1_11:66012415-66012523:-|nuORF	23.036711822280957	0.7814608874307191	1				NaN	NaN	0	NaN	270	2575	2846
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2851	14.097	NaN	2091.9	30	0	457.42	0.214	+			4031	ATDDSKAVCR	10	42	561.7641877622564	NaN	0	561.76416015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_ATDDSKAVC(Carbamidomethyl (C))R_	ENSG00000115758|ENST00000234111|ODC1	54.722347961057174	0.27574710963839943	1				NaN	NaN	0	NaN	271	2578	2850
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2852	14.1	NaN	1377.6	30	0	174.28	0.034	+			3833	ATAINPLHQ	9	33	482.76378932887303	963.5130257245461	2	482.7644348144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATAINPLHQ_	TFAP2C|p.A85T|1|0.07|ENSG00000087510|chr20:56631409-56631409|G/A|missense_variant	35.61828744233558	0.47037581924408073	1				NaN	NaN	0	NaN	272	2578	2850
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2858	14.117	NaN	3554.1	30	0	1655.4	0.214				-1	 	0	29	537.7980934322883	1073.5816339313765	2	537.7985229492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	275	2581	2857
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2859	14.12	NaN	3396.6	30	0	962.49	0.106	+			31682	QNKLPASK	8	55	443.26113904206113	884.5077251509223	2	443.2610168457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QNKLPASK_	ENST00000555019.5_2_14:94442850-94442979:-|nuORF	79.45101966838831	0.3281480470254892	1				NaN	NaN	0	NaN	276	2581	2857
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2860	14.122	NaN	1527.3	30	0	322.82	0.106	+			29305	NYNAAINK	8	43	454.23514337561784	NaN	0	454.23553466796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NYNAAINK_	ENSG00000101981|ENST00000218099|F9;nc|ENSG00000101981|P00740-2|F9	26.79610172149135	1.7418937515398478	1				NaN	NaN	0	NaN	277	2581	2857
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2861	14.124	NaN	1673.9	30	0	359.02	0.106				-1	SITHCLRDF	9	26	574.7794746894855	1147.5443964457709	2	574.7803955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_SITHC(Carbamidomethyl (C))LRDF_	ENSG00000109189|ENST00000441222|USP46;ENST00000514536.5_1_4:53464769-53497293:-|nuORF;nc|ENSG00000109189|P62068-2|USP46;nc|ENSG00000109189|P62068-3|USP46;nc|ENSG00000109189|P62068-4|USP46	10.865556482863946	0.6112419832031292	1				NaN	NaN	0	NaN	278	2581	2857
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2862	14.126	NaN	1860	30	0	234	0.106	+			41846	SVSTQQPPKK	10	38	550.3089966947623	NaN	0	550.3092651367188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVSTQQPPKK_	ENSG00000145012|ENST00000617246|LPP;LPP|p.C364Lfs*29|1|0.29|ENSG00000145012|chr3:188609815-188609816|-/C|frameshift_variant	41.42661286455405	0.3598046802465243	1				NaN	NaN	0	NaN	279	2581	2857
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2863	14.128	NaN	2177.5	30	0	372.61	0.106	+			40159	STQQPLTKK	9	47	515.7984249405931	1029.5822969479862	2	515.7985229492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STQQPLTKK_	ENSG00000182511|ENST00000328850|FES;ENST00000464684.5_1_15:91434747-91438785:+|nuORF;ENST00000496379.5_1_15:91433070-91435551:+|nuORF;nc|ENSG00000182511|P07332-2|FES;nc|ENSG00000182511|P07332-3|FES;nc|ENSG00000182511|P07332-4|FES	42.86426827375447	0.38666266728046506	1				NaN	NaN	0	NaN	280	2581	2857
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2864	14.129	NaN	943.5	30	0	190.08	0.036			+	13452	GLIIVHSGAAL	11	33	350.88136700180854	1049.6222716056257	3	350.8816223144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GLIIVHSGAAL_	REV__ENSG00000169188|ENST00000374987|APEX2	32.75053402867276	0.6462648045997152	1				NaN	NaN	0	NaN	281	2581	2857
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2868	14.143	NaN	1136	30	0	384.3	0.214				-1	CPVLGAHR	8	26	455.23988734051375	NaN	0	455.24005126953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_C(Carbamidomethyl (C))PVLGAHR_	ENSG00000106785|ENST00000341469|TRIM14;ENST00000478401.1_1_9:100872510-100881344:-|nuORF;nc|ENSG00000106785|Q14142-2|TRIM14;nc|ENSG00000106785|Q14142-3|TRIM14	21.70233525837049	1.7418937515398478	1				NaN	NaN	0	NaN	282	2584	2867
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2869	14.147	NaN	2107	30	0	695.01	0.106			+	39723	STIRPKKW	8	31	339.20500675652283	NaN	0	339.2049865722656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STIRPKKW_	REV__ENST00000331113.8_1_7:120381633-120387745:+|nuORF	31.954861631926434	1.7418937515398478	1				NaN	NaN	0	NaN	283	2584	2867
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2870	14.149	NaN	630.13	30	0	168.74	0.106	+			23568	LALIIVGFGT	10	24	335.2095947265625	NaN	0	335.2095947265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LALIIVGFGT_	ENSG00000166928|ENST00000300187|MS4A14;MS4A14|p.D504Vfs*50|1|0.11|ENSG00000166928|chr11:60416476-60416477|-/GGTCTCTTCC|frameshift_variant;MS4A14|p.P357Lfs*19|1|0.1|ENSG00000166928|chr11:60416034-60416034|C/-|frameshift_variant;nc|ENSG00000166928|Q96JA4-2|MS4A14;nc|ENSG00000166928|Q96JA4-5|MS4A14	17.468008924990375	0.4201028297492154	1				NaN	NaN	0	NaN	284	2584	2867
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2871	14.151	NaN	792.88	30	0	141.2	0.106			+	1759	AIALNLIYI	9	31	502.311279296875	NaN	0	502.311279296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AIALNLIYI_	REV__ENSG00000139874|ENST00000267377|SSTR1;REV__ENSG00000180616|ENST00000357585|SSTR2;REV__nc|ENSG00000180616|P30874-2|SSTR2	19.996771675451527	0.3693019437812985	1				NaN	NaN	0	NaN	285	2584	2867
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2872	14.153	NaN	1372.4	30	0	199.85	0.039			+	32044	QRSFDGTYLLK	11	34	664.3525390625	NaN	0	664.3525390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QRSFDGTYLLK_	REV__ENSG00000119203|ENST00000238112|CPSF3	15.33747794439485	0.456735970842152	1				NaN	NaN	0	NaN	286	2584	2867
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2878	14.167	NaN	1651.2	30	0	231.05	0.214	+			6048	AVMGNPKVK	9	40	480.2703473300408	NaN	0	480.2703857421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_AVM(Oxidation (M))GNPKVK_	ENSG00000223609|ENST00000650601|HBD;ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF;HBD|p.A63V|1|0.34|ENSG00000223609|chr11:5234118-5234118|G/A|missense_variant	53.351449002276354	0.18359631779194618	1				NaN	NaN	0	NaN	289	2587	2877
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2879	14.171	NaN	1902.5	30	0	350.71	0.035	+			41052	SVIENAKKK	9	53	508.8083592120189	1015.6021654908378	2	508.80767822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVIENAKKK_	ENSG00000132305|ENST00000410111|IMMT;ENST00000409258.2_1_2:86386442-86398424:-|nuORF;ENST00000474969.5_1_2:86385703-86422514:-|nuORF;ENST00000490238.5_1_2:86385703-86389088:-|nuORF;nc|ENSG00000132305|Q16891-2|IMMT;nc|ENSG00000132305|Q16891-3|IMMT;nc|ENSG00000132305|Q16891-4|IMMT	75.04331003522576	0.118981335847003	1				NaN	NaN	0	NaN	290	2587	2877
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2885	14.187	NaN	4477.3	30	0	1155.9	0.214	+			40833	SVELGKQKK	9	62	508.8083592120189	1015.6021654908378	2	508.8082580566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVELGKQKK_	ENSG00000149485|ENST00000350997|FADS1;nc|ENSG00000149485|O60427-2|FADS1;nc|ENSG00000149485|O60427|FADS1	82.24051045832904	0.08786059719216216	1				NaN	NaN	0	NaN	293	2590	2884
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2886	14.191	NaN	3200.3	30	0	697.61	0.036	+			15152	GTSETSKTLK	10	57	526.2850856543832	1050.5556183755664	2	526.2853393554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTSETSKTLK_	ENSG00000153201|ENST00000283195|RANBP2;RANBP2|p.C2737Vfs*35|1|0.18|ENSG00000153201|chr2:108772957-108772957|T/-|frameshift_variant;RANBP2|p.F3068Lfs*10|1|0.06|ENSG00000153201|chr2:108782692-108782692|T/-|frameshift_variant;RANBP2|p.H3114Sfs*18|1|0.33|ENSG00000153201|chr2:108782827-108782828|-/T|frameshift_variant;RANBP2|p.K1989Nfs*9|1|0.05|ENSG00000153201|chr2:108766505-108766506|-/TATCCTG|frameshift_variant;RANBP2|p.K2576Nfs*63|2|0.22|ENSG00000153201|chr2:108768262-108768262|A/-|frameshift_variant	56.632244143249146	0.3964695498866976	1				NaN	NaN	0	NaN	294	2590	2884
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2892	14.207	NaN	8761.8	30	0	3861.5	0.214	+			14685	GTIGHVAHGK	10	62	488.76936090251365	975.5241688718273	2	488.769287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTIGHVAHGK_	EIF2S3|p.I441Nfs*4|1|0.29|ENSG00000130741|chrX:24073223-24073224|-/A|frameshift_variant;ENSG00000130741|ENST00000253039|EIF2S3;ENSG00000180574|ENST00000538173|EIF2S3B;nc|ENSG00000180574|Q2VIR3-2|EIF2S3B	95.81516180277367	0.09778090853194907	1				NaN	NaN	0	NaN	297	2593	2891
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2893	14.211	NaN	7445.6	30	0	1798.4	0.106	+			32781	RASHPIVQK	9	60	345.8732523767362	NaN	0	345.8733215332031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RASHPIVQK_	ENSG00000112159|ENST00000369393|MDN1;MDN1|p.E2692*|2|0.32|ENSG00000112159|chr6:89706133-89706134|-/A|frameshift_variant;MDN1|p.F2691Lfs*7|2|0.37|ENSG00000112159|chr6:89706134-89706134|A/-|frameshift_variant;MDN1|p.K2642Nfs*17|2|0.29|ENSG00000112159|chr6:89707449-89707449|T/-|frameshift_variant;MDN1|p.L4077Cfs*15|1|0.16|ENSG00000112159|chr6:89680625-89680625|G/-|frameshift_variant;MDN1|p.L5278Ffs*6|1|0.18|ENSG00000112159|chr6:89652273-89652274|-/A|frameshift_variant	49.536043120802724	0.20989033510253738	1				NaN	NaN	0	NaN	298	2593	2891
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2894	14.213	NaN	2232.8	30	0	688.51	0.106	+			21934	KSADPLKSK	9	31	325.1939756553279	972.5600975661837	3	325.194091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KSADPLKSK_	CAPN7|p.K253Nfs*21|1|0.35|ENSG00000131375|chr3:15227870-15227870|A/-|frameshift_variant;ENSG00000131375|ENST00000253693|CAPN7;ENST00000457023.1_1_3:15247773-15262489:+|nuORF	24.519189625965996	0.574102787014149	1				NaN	NaN	0	NaN	299	2593	2891
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2895	14.214	NaN	1242.3	30	0	253.63	0.106				-1	VNMGKGDPNK	10	19	538.2642822265625	NaN	0	538.2642822265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_VNM(Oxidation (M))GKGDPNK_	ENST00000511316.1_1_4:174254218-174255486:-|nuORF	14.137123925751023	0.4201028297492154	1				NaN	NaN	0	NaN	300	2593	2891
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2896	14.216	NaN	1842.6	30	0	518.22	0.106				-1	SAMKPQFVK	9	22	351.1924422358989	NaN	0	351.1924743652344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_SAM(Oxidation (M))KPQFVK_	tr|U7SWR9|U7SWR9_FUSNUSignalpeptidepeptidaseSppA,67KtypeOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01151PE=3SV=1	20.94693142431847	0.3660861156085067	1				NaN	NaN	0	NaN	301	2593	2891
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2897	14.218	NaN	3479.8	30	0	755.66	0.106	+			4829	ATPEKSLHDK	10	34	563.2983263336391	1124.5820997340782	2	563.2989501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATPEKSLHDK_	ENSG00000077097|ENST00000264331|TOP2B;nc|ENSG00000077097|Q02880-2|TOP2B;TOP2B|p.S1441Kfs*20|1|0.32|ENSG00000077097|chr3:25606099-25606100|-/T|frameshift_variant;TOP2B|p.S1441Vfs*41|4|0.13|ENSG00000077097|chr3:25606100-25606100|T/-|frameshift_variant;TOP2B|p.S1476Ffs*11|2|0.3|ENSG00000077097|chr3:25604822-25604823|-/A|frameshift_variant	35.17822180527639	0.5925517082438457	1				NaN	NaN	0	NaN	302	2593	2891
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2898	14.22	NaN	1607.7	30	0	173.27	0.034			+	43458	TGNKPESVQ	9	44	480.24286396243684	958.4711749916737	2	480.2430725097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TGNKPESVQ_	REV__PHF14|p.K182Nfs*19|1|0.14|ENSG00000106443|chr7:10982799-10982799|A/-|frameshift_variant	29.170058357718403	0.5306379469863586	1				NaN	NaN	0	NaN	303	2593	2891
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2902	14.234	NaN	10424	30	0	2949.6	0.214	+			15379	GTYDAKVKK	9	65	505.2876456739893	1008.5607384147786	2	505.28729248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTYDAKVKK_	ENSG00000159713|ENST00000393957|TPPP3	136.26810882979174	0.012230845423532208	1				NaN	NaN	0	NaN	304	2596	2901
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2903	14.237	NaN	11819	30	0	3721.7	0.106	+			15381	GTYDAKVKK	9	41	337.1940077647083	1008.560193894325	3	337.1939697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTYDAKVKK_	ENSG00000159713|ENST00000393957|TPPP3	24.20275056022122	0.577060078256802	1				NaN	NaN	0	NaN	305	2596	2901
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2904	14.239	NaN	722.69	30	0	150.77	0.106			+	46937	VIYMVYIK	8	29	514.7960191396553	1027.5774853461105	2	514.7959594726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VIYMVYIK_	REV__RAG2|p.S111Y|1|0.31|ENSG00000175097|chr11:36593837-36593837|G/T|missense_variant	16.704963439144045	0.7946246187734944	1				NaN	NaN	0	NaN	306	2596	2901
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2905	14.241	NaN	1477.9	30	0	376.6	0.036			+	28585	NKKRNVEKP	9	31	556.8299204891707	1111.6452880451413	2	556.831298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NKKRNVEKP_	REV__ENSG00000134986|ENST00000257435|NREP;REV__ENST00000507742.5_1_5:111066620-111092910:-|nuORF;REV__nc|ENSG00000134986|Q16612-2|NREP;REV__NREP|p.P31L|1|0.14|ENSG00000134986|chr5:111731036-111731036|G/A|missense_variant	21.9598887501803	0.5980208138527809	1				NaN	NaN	0	NaN	307	2596	2901
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2912	14.259	NaN	13572	30	0	4843.1	0.214			+	9946	ERAKADTATA	10	57	517.2668004049467	1032.5190478766933	2	517.2665405273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ERAKADTATA_	REV__PCNT|p.E1401K|1|0.38|ENSG00000160299|chr21:46391361-46391361|G/A|missense_variant	29.170058357718403	0.6416167986984785	1				NaN	NaN	0	NaN	311	2599	2911
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2913	14.263	NaN	10879	30	0	2779.7	0.106	+			15128	GTRRMARK	8	55	331.19046111789555	990.5495539538867	3	331.1902770996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_GTRRM(Oxidation (M))ARK_	ENSG00000074370|ENST00000397041|ATP2A3;nc|ENSG00000074370|Q93084-1|ATP2A3;nc|ENSG00000074370|Q93084-3|ATP2A3;nc|ENSG00000074370|Q93084-4|ATP2A3;nc|ENSG00000074370|Q93084-5|ATP2A3;nc|ENSG00000074370|Q93084-6|ATP2A3;nc|ENSG00000074370|Q93084-7|ATP2A3	71.29570347882199	0.39610197767395533	1				NaN	NaN	0	NaN	312	2599	2911
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2914	14.265	NaN	5500.3	30	0	1763	0.106			+	20737	KGTSAKIF	8	55	426.2529684410627	850.4913839489254	2	426.2526550292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KGTSAKIF_	REV__tr|U7ST00|U7ST00_FUSNUNagDproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01658PE=3SV=1	53.351449002276354	0.5676011784961348	1				NaN	NaN	0	NaN	313	2599	2911
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2915	14.267	NaN	3237.5	30	0	799.67	0.106	+			7354	DDAAGSRKKKG	11	35	378.20714254484005	1131.5995982347201	3	378.2072448730469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DDAAGSRKKKG_	ENSG00000204851|ENST00000599531|PNMA8B	25.57405402267927	0.7215402271931856	1				NaN	NaN	0	NaN	314	2599	2911
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2916	14.268	NaN	1874.5	30	0	701.31	0.106			+	1040	AEKLYYLAK	9	41	366.8780978319431	1097.6124640960293	3	366.8782958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEKLYYLAK_	REV__ENSG00000133985|ENST00000256367|TTC9	45.97224482568171	0.3502073465782774	1				NaN	NaN	0	NaN	315	2599	2911
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2917	14.27	NaN	1530.5	30	0	266.14	0.106			+	20203	KELELVHR	8	39	512.3004768232352	1022.5864007132703	2	512.3004760742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KELELVHR_	REV__RAB11FIP3|p.R472H|1|0.13|ENSG00000090565|chr16:505543-505543|G/A|missense_variant	56.72105179125745	0.5342425954139568	1				NaN	NaN	0	NaN	316	2599	2911
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2918	14.272	NaN	897.17	30	0	149.76	0.032	+			14957	GTMPLSVC	8	29	404.19057740504377	806.3666018768876	2	404.1903991699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GTMPLSVC_	ENSG00000117400|ENST00000372470|MPL	33.51558372728122	0.7005509609380386	1				NaN	NaN	0	NaN	317	2599	2911
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2923	14.286	NaN	5424.1	30	0	1048.6	0.214			+	7856	DQVMADRWS	9	36	554.2473774880964	1106.4802020429927	2	554.24853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DQVMADRWS_	REV__ENSG00000182050|ENST00000611864|MGAT4C;REV__MGAT4C|p.L276Yfs*2|1|0.09|ENSG00000182050|chr12:85979899-85979899|A/-|frameshift_variant;REV__MGAT4C|p.N300Mfs*2|1|0.24|ENSG00000182050|chr12:85979827-85979827|T/-|frameshift_variant;REV__nc|ENSG00000182050|Q9UBM8-2|MGAT4C	15.641811463095205	0.6112419832031292	1				NaN	NaN	0	NaN	319	2602	2922
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2924	14.29	NaN	2547.3	30	0	944.03	0.106				-1	MGTGPGTQAVL	11	29	524.2617098623374	1046.5088667914747	2	524.2620849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_M(Oxidation (M))GTGPGTQAVL_	HERV1_I-int_dup2|chr3:34679996-34686397:+|1.0948245018220069|0.0565463038051543|4.28|448.0|368|3|anti-sense	17.468008924990375	0.788697330333842	1				NaN	NaN	0	NaN	320	2602	2922
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2925	14.292	NaN	4793.6	30	0	1980.6	0.106			+	-1	EASACPRHK	9	31	528.2565611386771	1054.498569344154	2	528.2575073242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_EASAC(Carbamidomethyl (C))PRHK_	REV__ENST00000492877.1_1_1:28210997-28211207:+|nuORF	20.94693142431847	0.6074874384046576	1				NaN	NaN	0	NaN	321	2602	2922
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2926	14.294	NaN	5118.1	30	0	1061.9	0.106				-1	MCNFSANDFQ	10	24	625.2328378890247	1248.4511228448494	2	625.2337646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))C(Carbamidomethyl (C))NFSANDFQ_	ENSG00000177853|ENST00000316045|ZNF518A;ZNF518A|p.I1254Nfs*11|1|0.18|ENSG00000177853|chr10:96160075-96160076|-/A|frameshift_variant;ZNF518A|p.L1107Ffs*8|1|0.31|ENSG00000177853|chr10:96159635-96159636|-/T|frameshift_variant;ZNF518A|p.N426Mfs*2|1|0.29|ENSG00000177853|chr10:96157595-96157595|A/-|frameshift_variant;ZNF518A|p.R303Kfs*10|1|0.3|ENSG00000177853|chr10:96157223-96157224|-/A|frameshift_variant	9.182911543092327	0.7697862422657429	1				NaN	NaN	0	NaN	322	2602	2922
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2927	14.296	NaN	2873.1	30	0	680.97	0.106	+			19777	KEAGTKALQ	9	48	473.27178959795015	944.5290262627003	2	473.27178955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEAGTKALQ_	ENSG00000162520|ENST00000409190|SYNC;nc|ENSG00000162520|Q9H7C4-2|SYNC;SYNC|p.T364A|1|0.23|ENSG00000162520|chr1:32695008-32695008|T/C|missense_variant	45.97224482568171	0.3502073465782774	1				NaN	NaN	0	NaN	323	2602	2922
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2928	14.297	NaN	3020.1	30	0	812.46	0.106			+	-1	QGTWAMGQAMG	11	26	577.2405395507812	NaN	0	577.2405395507812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_QGTWAM(Oxidation (M))GQAMG_	REV__ENSG00000112337|ENST00000377850|SLC17A2;REV__nc|ENSG00000112337|O00624-2|SLC17A2;REV__nc|ENSG00000112337|O00624|SLC17A2	12.811709888998246	0.456735970842152	1				NaN	NaN	0	NaN	324	2602	2922
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2929	14.299	NaN	1896.9	30	0	701.4	0.035	+			38699	SSKLLQARV	9	40	334.5414300082606	1000.6024606249819	3	334.5417785644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSKLLQARV_	DOCK8|p.E1615Dfs*7|1|0.05|ENSG00000107099|chr9:433933-433934|-/C|frameshift_variant;DOCK8|p.M1114Yfs*4|1|0.4|ENSG00000107099|chr9:405014-405015|-/T|frameshift_variant;DOCK8|p.P952Qfs*24|1|0.35|ENSG00000107099|chr9:386404-386404|C/-|frameshift_variant;ENSG00000107099|ENST00000432829|DOCK8;nc|ENSG00000107099|Q8NF50-2|DOCK8;nc|ENSG00000107099|Q8NF50-3|DOCK8;nc|ENSG00000107099|Q8NF50-4|DOCK8	29.170058357718403	0.5306379469863586	1				NaN	NaN	0	NaN	325	2602	2922
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2935	14.315	NaN	2454.5	30	0	473.94	0.214	+			15155	GTSEVIHRK	9	53	513.7883513928692	1025.5621498525384	2	513.7885131835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTSEVIHRK_	ENSG00000169375|ENST00000394947|SIN3A	53.08895987439943	0.27122541748218487	1				NaN	NaN	0	NaN	328	2605	2934
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2936	14.319	NaN	1233.9	30	0	334	0.106				-1	YWWGGCRM	8	16	558.2294757872776	1114.444398641355	2	558.2296752929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_YWWGGC(Carbamidomethyl (C))RM_	ENSG00000100078|ENST00000215885|PLA2G3	8.822329726475273	0.7821568878176242	1				NaN	NaN	0	NaN	329	2605	2934
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2937	14.321	NaN	483.58	30	0	41.851	0.033			+	21619	KPPTPKAAA	9	29	440.7665125334217	NaN	0	440.7662353515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KPPTPKAAA_	REV__ENSG00000159140|ENST00000356577|SON;REV__nc|ENSG00000159140|P18583-10|SON;REV__nc|ENSG00000159140|P18583-2|SON;REV__nc|ENSG00000159140|P18583-3|SON;REV__nc|ENSG00000159140|P18583-4|SON;REV__nc|ENSG00000159140|P18583-5|SON;REV__nc|ENSG00000159140|P18583-7|SON;REV__nc|ENSG00000159140|P18583-9|SON	34.172542307311794	0.30503706118289736	1				NaN	NaN	0	NaN	330	2605	2934
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2942	14.336	NaN	2189.5	30	0	648.67	0.214				-1	KDGKPMLCQ	9	34	518.2522707932375	1034.4899886532748	2	518.7536010742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_KDGKPM(Oxidation (M))LCQ_	STRAP|p.R44C|1|0.2|ENSG00000023734|chr12:15883558-15883558|C/T|missense_variant	35.61828744233558	0.47037581924408073	1				NaN	NaN	0	NaN	332	2608	2941
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2943	14.339	NaN	1776.9	30	0	594.35	0.035	+			3751	ATAEKCLHK	9	41	500.76550394956496	999.5164549659299	2	500.7661437988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATAEKCLHK_	ENSG00000180098|ENST00000373830|TRNAU1AP;ENST00000464880.5_1_1:28879622-28887433:+|nuORF;ENST00000480930.5_1_1:28879622-28887666:+|nuORF;ENST00000484775.1_1_1:28887181-28904036:+|nuORF;ENST00000491577.5_1_1:28879622-28887259:+|nuORF;ENST00000495995.5_1_1:28880088-28887666:+|nuORF;TRNAU1AP|p.Q222Sfs*29|1|0.24|ENSG00000180098|chr1:28571305-28571305|C/-|frameshift_variant	40.77816245573522	0.41113185337114944	1				NaN	NaN	0	NaN	333	2608	2941
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2953	14.373	NaN	1207.2	30	0	175.95	0.214			+	9155	EGNLEKPK	8	44	457.75060847474964	913.4866640162993	2	457.75079345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EGNLEKPK_	REV__ENSG00000226430|ENST00000530447|USP17L7	64.20726635412375	0.4601301477144759	1				NaN	NaN	0	NaN	337	2614	2952
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2954	14.377	NaN	1260.3	30	0	341.2	0.106			+	-1	PFPPPIECP	9	27	527.2585059223726	NaN	0	527.2586059570312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_PFPPPIEC(Carbamidomethyl (C))P_	REV__ENSG00000166924|ENST00000300179|NYAP1;REV__nc|ENSG00000166924|Q6ZVC0-2|NYAP1;REV__NYAP1|p.R745Gfs*10|1|0.38|ENSG00000166924|chr7:100491057-100491057|C/-|frameshift_variant;REV__NYAP1|p.V572Cfs*2|2|0.43|ENSG00000166924|chr7:100489429-100489429|G/-|frameshift_variant	19.359975847455235	0.3714571876404798	1				NaN	NaN	0	NaN	338	2614	2952
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2955	14.379	NaN	2149.7	30	0	164.62	0.036			+	19724	KDTLDKSING	10	53	545.7903541280996	1089.566155322999	2	545.7894897460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KDTLDKSING_	REV__RBBP6|p.K1666T|1|0.37|ENSG00000122257|chr16:24572063-24572063|A/C|missense_variant	70.8162118820467	0.27065172005956	1				NaN	NaN	0	NaN	339	2614	2952
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2960	14.394	NaN	1496.8	30	0	197.18	0.142			+	31305	QIKGKSKF	8	35	468.2871652156872	934.5597774981744	2	468.2866516113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QIKGKSKF_	REV__BTNL3|p.S401Afs*7|2|0.29|ENSG00000168903|chr5:181005665-181005665|C/-|frameshift_variant;REV__ENSG00000168903|ENST00000342868|BTNL3;REV__nc|ENSG00000168903|Q6UXE8-2|BTNL3	63.30626980617807	0.4690498839812213	1				NaN	NaN	0	NaN	341	2617	2959
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2965	14.411	NaN	3104.1	30	0	812.75	0.214	+			44696	TTISAEKVKKK	11	41	411.590607286921	1231.749992460963	3	411.5904541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTISAEKVKKK_	ENSG00000120800|ENST00000261637|UTP20;UTP20|p.A1865Sfs*12|1|0.08|ENSG00000120800|chr12:101356982-101356983|-/ATCCTTTAGTC|frameshift_variant	42.33807565288922	0.5259510355945483	1				NaN	NaN	0	NaN	343	2620	2964
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2966	14.415	NaN	1470.2	30	0	196.43	0.037	+			6126	AVQATKNYNK	10	48	568.8063239602967	1135.5980949873933	2	569.3088989257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVQATKNYNK_	DHDDS|p.V173Wfs*31|1|0.34|ENSG00000117682|chr1:26447630-26447630|G/-|frameshift_variant;ENSG00000117682|ENST00000236342|DHDDS;nc|ENSG00000117682|Q86SQ9-2|DHDDS	40.05817265558897	0.5486090488315611	1				NaN	NaN	0	NaN	344	2620	2964
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2979	14.464	NaN	1895	30	0	210.79	0.214	+			15889	GYTALHVFS	9	53	497.7525817131092	993.4906104930184	2	497.7522888183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GYTALHVFS_	SENP2|p.P433T|1|0.02|ENSG00000163904|chr3:185619353-185619353|C/A|missense_variant	45.9519527083369	0.35044536499095585	1				NaN	NaN	0	NaN	348	2629	2978
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2980	14.467	NaN	2348.1	30	0	392.27	0.106			+	16242	HEEISRQLS	9	61	549.7798571719794	1097.5451614107587	2	549.7801513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HEEISRQLS_	REV__DISP1|p.E1470Gfs*5|1|0.31|ENSG00000154309|chr1:223005800-223005801|-/G|frameshift_variant;REV__ENSG00000154309|ENST00000675850|DISP1	62.107414245175825	0.1960472003779324	1				NaN	NaN	0	NaN	349	2629	2978
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2981	14.469	NaN	2104.9	30	0	742.43	0.106				-1	IMMFVHTCRV	10	30	655.3149602736122	NaN	0	655.314697265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_IM(Oxidation (M))MFVHTC(Carbamidomethyl (C))RV_	ENSG00000086758|ENST00000262854|HUWE1;ENST00000218328.12_1_X:53611240-53681066:-|nuORF;HUWE1|p.R1657Mfs*13|1|0.21|ENSG00000086758|chrX:53585043-53585044|-/A|frameshift_variant;nc|ENSG00000086758|Q7Z6Z7-2|HUWE1;nc|ENSG00000086758|Q7Z6Z7-3|HUWE1	16.473147378115264	0.4201028297492154	1				NaN	NaN	0	NaN	350	2629	2978
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2982	14.471	NaN	1132.2	30	0	240.67	0.106	+			13170	GHPLLYWKQ	9	39	571.3115234375	NaN	0	571.3115234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GHPLLYWKQ_	ENST00000523272.1_1_22:22380511-22380834:+|nuORF	18.324413293986947	0.3749620627292244	1				NaN	NaN	0	NaN	351	2629	2978
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2983	14.473	NaN	1040.3	30	0	130.4	0.034			+	32893	RDPFLLQG	8	39	473.25999078742535	944.5054286416507	2	473.2591247558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RDPFLLQG_	REV__ENST00000367157.4_2_1:205272419-205272683:-|nuORF	26.79610172149135	0.7524337208463756	1				NaN	NaN	0	NaN	352	2629	2978
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2994	14.508	NaN	27077	30	0	4136.7	0.214	+			3654	ASYGVSKGK	9	74	448.74526151987726	895.4759701065545	2	448.7449951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASYGVSKGK_	ENSG00000153187|ENST00000640218|HNRNPU;nc|ENSG00000153187|Q00839-2|HNRNPU	91.26522074875469	0.06129826844580791	1				NaN	NaN	0	NaN	357	2635	2993
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2995	14.512	NaN	4434.5	30	0	1688.4	0.106	+			15096	GTQIHKVCK	9	69	507.28133577102074	1012.5481186088415	2	507.2814025878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTQIHKVCK_	ENST00000594085.5_1_19:40854624-40871501:+|nuORF	150.36159442982594	0.006784847064083231	1				NaN	NaN	0	NaN	358	2635	2993
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2996	14.514	NaN	1179.2	30	0	184.9	0.106				-1	VDMTCGGCAE	10	40	550.1967470164196	NaN	0	549.78076171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_VDMTC(Carbamidomethyl (C))GGC(Carbamidomethyl (C))AE_	ENSG00000177556|ENST00000313115|ATOX1	20.94693142431847	0.4201028297492154	1				NaN	NaN	0	NaN	359	2635	2993
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2997	14.515	NaN	2465.4	30	0	366.69	0.106			+	13297	GKATGNSLKIK	11	46	558.8399983861025	1115.6654438390049	2	558.83984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GKATGNSLKIK_	REV__ENSG00000188042|ENST00000339728|ARL4C;REV__nc|ENSG00000188042|P56559|ARL4C	74.1650062923329	0.2010173757047072	1				NaN	NaN	0	NaN	360	2635	2993
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2998	14.517	NaN	643.48	30	0	140.19	0.106				-1	KAVMIVGICG	10	22	524.2859497070312	NaN	0	524.2859497070312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_KAVMIVGIC(Carbamidomethyl (C))G_	ENST00000484560.1_1_3:146234424-146234930:-|nuORF	12.206847966760668	0.4201028297492154	1				NaN	NaN	0	NaN	361	2635	2993
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	2999	14.519	NaN	907.89	30	0	251.58	0.035	+			1652	AGPMHPRLGP	10	36	516.7753425617551	1031.5361321903101	2	516.7760620117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AGPMHPRLGP_	ENSG00000164736|ENST00000297316|SOX17	30.503639358989545	0.6307262373768582	1				NaN	NaN	0	NaN	362	2635	2993
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3003	14.533	NaN	6594.6	30	0	3893.1	0.214			+	21888	KRPSCGSW	8	34	460.7246337583497	919.4347145834994	2	460.724365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KRPSCGSW_	REV__ENST00000252506.10_1_9:92221055-92221238:+|nuORF	44.116797842482775	0.6307669463330267	1				NaN	NaN	0	NaN	363	2638	3002
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3004	14.537	NaN	6644.4	30	0	2345.3	0.106			+	3497	ASSIVIRHM	9	48	338.52325528389315	1012.5479364518794	3	338.52349853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASSIVIRHM_	REV__ENSG00000172575|ENST00000310803|RASGRP1;REV__nc|ENSG00000172575|O95267-2|RASGRP1;REV__nc|ENSG00000172575|O95267-3|RASGRP1;REV__nc|ENSG00000172575|O95267-4|RASGRP1;REV__nc|ENSG00000172575|O95267-5|RASGRP1	30.503639358989545	0.5181749237905803	1				NaN	NaN	0	NaN	364	2638	3002
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3005	14.539	NaN	1382.4	30	0	251.78	0.106	+			6398	AVVGEGREK	9	41	472.76152849916684	NaN	0	472.7616271972656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVVGEGREK_	ENSG00000071127|ENST00000499869|WDR1	47.95952297671804	0.22075498469600283	1				NaN	NaN	0	NaN	365	2638	3002
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3006	14.54	NaN	2777.6	30	0	506.99	0.106			+	19309	KAGKCVDR	8	49	438.7394356147505	875.464318296301	2	438.7391052246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KAGKCVDR_	REV__COL12A1|p.G2777Wfs*37|1|0.15|ENSG00000111799|chr6:75102684-75102685|-/G|frameshift_variant;REV__COL12A1|p.G3027Wfs*19|1|0.1|ENSG00000111799|chr6:75087680-75087681|-/G|frameshift_variant;REV__ENSG00000111799|ENST00000322507|COL12A1;REV__nc|ENSG00000111799|Q99715-2|COL12A1;REV__nc|ENSG00000111799|Q99715-4|COL12A1	71.29570347882199	0.39610197767395533	1				NaN	NaN	0	NaN	366	2638	3002
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3007	14.542	NaN	2795.5	30	0	1118.7	0.106				-1	ENCMVCAVD	9	35	520.6970598361315	1039.379566739063	2	520.6973876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_ENCMVC(Carbamidomethyl (C))AVD_	GLUD1|p.K386Nfs*22|1|0.05|ENSG00000148672|chr10:87060727-87060728|-/ACATACCATACAG|frameshift_variant	27.882242232435846	0.5426732730940306	1				NaN	NaN	0	NaN	367	2638	3002
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3008	14.544	NaN	3173.4	30	0	772.1	0.106	+			42091	SYGVSKGK	8	39	413.2267145695593	824.4388762059186	2	413.22686767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SYGVSKGK_	ENSG00000153187|ENST00000640218|HNRNPU;nc|ENSG00000153187|Q00839-2|HNRNPU	66.42927471994793	0.4381325844043345	1				NaN	NaN	0	NaN	368	2638	3002
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3009	14.546	NaN	2626.8	30	0	646.34	0.034	+			19644	KDKPESKK	8	49	480.27924839991084	958.5439438666217	2	480.27935791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KDKPESKK_	ENSG00000185567|ENST00000333244|AHNAK2;nc|ENSG00000185567|Q8IVF2-2|AHNAK2;nc|ENSG00000185567|Q8IVF2-3|AHNAK2	37.81151784470057	0.6698925118251505	1				NaN	NaN	0	NaN	369	2638	3002
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3016	14.562	NaN	9306.2	30	0	1618	0.214	+			38939	SSQPLASKQEK	11	67	601.8224368204441	1201.630320707688	2	601.8223266601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSQPLASKQEK_	ENSG00000137309|ENST00000311487|HMGA1;nc|ENSG00000137309|P17096-2|HMGA1;nc|ENSG00000137309|P17096-3|HMGA1	126.02560380233024	0.008598064468488318	1				NaN	NaN	0	NaN	373	2641	3015
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3017	14.566	NaN	853.59	30	0	262.6	0.106	+			7976	DSTSLEPSE	9	20	482.7075000503023	NaN	0	482.7076721191406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DSTSLEPSE_	ENST00000537175.1_1_12:16553488-16553881:-|nuORF	17.364965105453717	0.37820932774828947	1				NaN	NaN	0	NaN	374	2641	3015
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3018	14.568	NaN	1211	30	0	589.85	0.106			+	-1	QCDGHLGR	8	18	471.7148132324219	NaN	0	471.7148132324219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_QC(Carbamidomethyl (C))DGHLGR_	REV__ENST00000380605.2_1_20:2774971-2775076:-|nuORF	12.959181472943097	1.7418937515398478	1				NaN	NaN	0	NaN	375	2641	3015
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3019	14.57	NaN	825.69	30	0	137.87	0.106			+	30462	QACWDERS	8	27	497.70526123046875	NaN	0	497.70526123046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QACWDERS_	REV__ENST00000321617.7_1_17:73510144-73510285:-|nuORF	12.206847966760668	1.7418937515398478	1				NaN	NaN	0	NaN	376	2641	3015
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3020	14.571	NaN	1047.8	30	0	198.18	0.106				-1	PYKCMECE	8	29	509.6853338014107	1017.3561146696214	2	509.6843566894531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_PYKCM(Oxidation (M))ECE_	ZNF543|p.G261E|1|0.38|ENSG00000178229|chr19:57328244-57328244|G/A|missense_variant	12.206847966760668	0.7875100812264838	1				NaN	NaN	0	NaN	377	2641	3015
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3021	14.573	NaN	672.01	30	0	193.69	0.106				-1	SQLQAECE	8	19	475.2008972167969	NaN	0	475.2008972167969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SQLQAECE_	ENSG00000002822|ENST00000265854|MAD1L1;MAD1L1|p.R572C|1|0.1|ENSG00000002822|chr7:1936780-1936780|G/A|missense_variant;nc|ENSG00000002822|Q9Y6D9-3|MAD1L1;nc|ENSG00000002822|Q9Y6D9-4|MAD1L1	12.206847966760668	1.7418937515398478	1				NaN	NaN	0	NaN	378	2641	3015
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3022	14.575	NaN	249.61	30	0	65.203	0.033	+			46718	VGLYAANQ	8	16	418.2187194824219	NaN	0	418.2187194824219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VGLYAANQ_	ENSG00000166268|ENST00000552032|MYRFL	14.664097394203935	1.7418937515398478	1				NaN	NaN	0	NaN	379	2641	3015
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3028	14.591	NaN	3122.9	30	0	912.88	0.213				-1	TVTPTMVEGIY	11	40	613.8018188476562	NaN	0	613.8018188476562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_TVTPTM(Oxidation (M))VEGIY_	CAMSAP3|p.A1196T|1|0.43|ENSG00000076826|chr19:7617893-7617893|G/A|missense_variant	20.94693142431847	0.456735970842152	1				NaN	NaN	0	NaN	382	2644	3027
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3029	14.595	NaN	2290.5	30	0	410.28	0.106	+			33824	RQTGPGLPR	9	53	491.282806719681	980.551060506162	2	491.2826843261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RQTGPGLPR_	ENSG00000175262|ENST00000377004|C1orf127;nc|nan|Q8N9H9-2|C1orf127;nc|nan|Q8N9H9|C1orf127	47.657333605630114	0.33044192980041115	1				NaN	NaN	0	NaN	383	2644	3027
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3030	14.597	NaN	2726.1	30	0	867.91	0.106	+			37267	SLAELRRH	8	30	327.8575812996739	980.5509144992217	3	327.8580322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLAELRRH_	ENSG00000149639|ENST00000237536|SOGA1;nc|ENSG00000149639|O94964-1|MTCL2;nc|ENSG00000149639|O94964-4|MTCL2;SOGA1|p.D1221Gfs*26|1|0.3|ENSG00000149639|chr20:36794420-36794421|-/C|frameshift_variant;SOGA1|p.Q570Rfs*87|1|0.29|ENSG00000149639|chr20:36815734-36815734|G/-|frameshift_variant	29.841539824830324	0.7289191502596711	1				NaN	NaN	0	NaN	384	2644	3027
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3031	14.599	NaN	1304.7	30	0	125.23	0.04				-1	YKCGKCHVCTL	11	27	684.8169555664062	NaN	0	684.8169555664062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_YKC(Carbamidomethyl (C))GKC(Carbamidomethyl (C))HVCTL_	ENST00000554465.5_1_14:70237039-70238175:+|nuORF	9.182911543092327	0.456735970842152	1				NaN	NaN	0	NaN	385	2644	3027
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3036	14.613	NaN	1052	30	0	149.97	0.215	+			15380	GTYDAKVKK	9	39	505.2876456739893	1008.5607384147786	2	505.2873840332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTYDAKVKK_	ENSG00000159713|ENST00000393957|TPPP3	40.77816245573522	0.41113185337114944	1				NaN	NaN	0	NaN	387	2647	3035
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3037	14.617	NaN	1117.4	30	0	128.46	0.035			+	22442	KTLDSYCR	8	39	521.7527214517465	1041.490889970293	2	521.7537841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_KTLDSYC(Carbamidomethyl (C))R_	REV__ZNF727|p.C268Y|1|0.17|ENSG00000214652|chr7:64077852-64077852|G/A|missense_variant	42.396135135203025	0.6414440140393314	1				NaN	NaN	0	NaN	388	2647	3035
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3042	14.631	NaN	1801.9	30	0	293.27	0.213			+	-1	TPCRVLTQPR	10	41	614.3324584960938	NaN	0	614.3324584960938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_TPC(Carbamidomethyl (C))RVLTQPR_	REV__ENST00000357248.8_2_9:2015351-2029149:+|nuORF;REV__ENST00000457226.2_3_9:2017124-2029149:+|nuORF	37.81151784470057	0.3760215235790741	1				NaN	NaN	0	NaN	390	2650	3041
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3043	14.635	NaN	937.4	30	0	277.75	0.106			+	32804	RATQRPPG	8	32	441.7489087263265	881.483264519453	2	441.748779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RATQRPPG_	REV__ENST00000379757.8_1_6:7899909-7910954:-|nuORF	25.450171626174864	0.7628259754767981	1				NaN	NaN	0	NaN	391	2650	3041
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3044	14.637	NaN	882.28	30	0	185.05	0.106			+	-1	KMLLTHPL	8	32	484.7852035982109	NaN	0	484.78533935546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_KM(Oxidation (M))LLTHPL_	REV__ENST00000291574.8_1_21:45523422-45523842:+|nuORF	20.481830146152948	1.741893751539848	1				NaN	NaN	0	NaN	392	2650	3041
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3045	14.639	NaN	1872.5	30	0	248.91	0.106	+			2483	APPRAGGR	8	45	391.2250262903592	NaN	0	391.224853515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_APPRAGGR_	ENST00000562648.2_1_16:743493-744282:-|nuORF	52.29916861842294	1.7418937515398478	1				NaN	NaN	0	NaN	393	2650	3041
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3046	14.641	NaN	2442.4	30	0	451.71	0.035	+			20622	KGESGILGKD	10	49	502.2743540461658	1002.5341551591316	2	502.79986572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KGESGILGKD_	ENSG00000136875|ENST00000374198|PRPF4;nc|ENSG00000136875|O43172|PRPF4	51.52775601994872	0.4429225830406686	1				NaN	NaN	0	NaN	394	2650	3041
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3052	14.657	NaN	8687.6	30	0	1558.5	0.214	+			44851	TTTTTHITK	9	60	502.2743540461658	1002.5341551591316	2	502.2745361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTTTTHITK_	ENSG00000079819|ENST00000337057|EPB41L2;ENSG00000082397|ENST00000341928|EPB41L3;ENST00000368126.2_1_6:131179278-131186801:-|nuORF;ENST00000452150.6_1_6:131179278-131188835:-|nuORF;nc|ENSG00000079819|O43491-3|EPB41L2;nc|ENSG00000079819|O43491-4|EPB41L2;nc|ENSG00000082397|Q9Y2J2-2|EPB41L3;nc|ENSG00000082397|Q9Y2J2-4|EPB41L3	112.10723106719422	0.02684780151337622	1				NaN	NaN	0	NaN	397	2653	3051
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3053	14.66	NaN	2853.7	30	0	347.27	0.106	+			42709	TDDSTLVRI	9	63	510.27111197448176	1018.5276710157635	2	510.27178955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TDDSTLVRI_	ENSG00000138279|ENST00000372921|ANXA7;nc|ENSG00000138279|P20073|ANXA7	79.45101966838831	0.09992237243120712	1				NaN	NaN	0	NaN	398	2653	3051
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3054	14.662	NaN	4576.4	30	0	778.28	0.106	+			48374	VTHHVSVTK	9	60	336.5258051246599	NaN	0	336.5258483886719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTHHVSVTK_	ENSG00000164828|ENST00000401592|SUN1;ENST00000413171.6_1_7:892397-912965:+|nuORF;ENST00000475971.5_1_7:893033-912965:+|nuORF;nc|ENSG00000164828|O94901-5|SUN1;nc|ENSG00000164828|O94901-6|SUN1;nc|ENSG00000164828|O94901-9|SUN1;SUN1|p.E739Gfs*27|1|0.41|ENSG00000164828|chr7:872532-872533|-/G|frameshift_variant	49.536043120802724	0.20989033510253738	1				NaN	NaN	0	NaN	399	2653	3051
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3055	14.664	NaN	1510	30	0	277.2	0.106	+			7361	DDEPPKKK	8	45	478.7558898925781	NaN	0	478.7558898925781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DDEPPKKK_	ENSG00000155329|ENST00000509437|ZCCHC10;ENST00000513541.5_1_5:132334277-132335876:-|nuORF;nc|ENSG00000155329|Q8TBK6-2|ZCCHC10	26.79610172149135	1.7418937515398478	1				NaN	NaN	0	NaN	400	2653	3051
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3056	14.666	NaN	1569.6	30	0	218.08	0.106	+			5631	AVDAGGVRK	9	34	436.75107422963225	871.4875955260645	2	436.7508544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVDAGGVRK_	ENSG00000148634|ENST00000373700|HERC4;ENST00000427635.6_1_10:69682690-69747802:-|nuORF;ENST00000480158.1_1_10:69714333-69714887:-|nuORF;nc|ENSG00000148634|Q5GLZ8-3|HERC4;nc|ENSG00000148634|Q5GLZ8-6|HERC4;nc|ENSG00000148634|Q5GLZ8|HERC4	40.77816245573522	0.41113185337114944	1				NaN	NaN	0	NaN	401	2653	3051
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3057	14.668	NaN	2351.8	30	0	550.2	0.106			+	27769	MRKFHIQLA	9	26	572.3245535293574	NaN	0	572.3251342773438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MRKFHIQLA_	REV__ENST00000574633.5_1_17:4186196-4210367:-|nuORF	17.364965105453717	0.37820932774828947	1				NaN	NaN	0	NaN	402	2653	3051
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3058	14.669	NaN	2375.9	30	0	844.61	0.031			+	34716	RVVPGAGA	8	50	363.71628609089055	725.4180192485811	2	363.7165222167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RVVPGAGA_	REV__PANX2|p.A274V|1|0.62|ENSG00000073150|chr22:50177533-50177533|C/T|missense_variant	28.2542754592877	0.7411748056684583	1				NaN	NaN	0	NaN	403	2653	3051
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3067	14.689	NaN	5694.3	30	0	1392.3	0.214	+			5091	ATSNVHMVKK	10	67	557.8049636314131	1113.595374329626	2	557.8057861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSNVHMVKK_	ENSG00000197256|ENST00000586659|KANK2;ENST00000590400.1_1_19:11303345-11305238:-|nuORF;KANK2|p.P430Rfs*5|1|0.23|ENSG00000197256|chr19:11178681-11178681|G/-|frameshift_variant;nc|ENSG00000197256|Q63ZY3-2|KANK2;nc|ENSG00000197256|Q63ZY3-3|KANK2	113.67052763333328	0.03709911389928312	1				NaN	NaN	0	NaN	409	2656	3066
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3068	14.693	NaN	7600.2	30	0	2027.3	0.106	+			2047	AKSRPGSPVL	10	55	337.8695983886719	NaN	0	337.8695983886719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AKSRPGSPVL_	ENSG00000138136|ENST00000370193|LBX1	45.02220120713402	0.3370728479115332	1				NaN	NaN	0	NaN	410	2656	3066
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3069	14.695	NaN	3714.4	30	0	942.31	0.106			+	10194	ETDHAIWR	8	32	514.2537178982959	NaN	0	514.2537841796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ETDHAIWR_	REV__ENSG00000261609|ENST00000648994|GAN	25.450171626174864	1.7418937515398478	1				NaN	NaN	0	NaN	411	2656	3066
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3070	14.697	NaN	2883.2	30	0	705.49	0.106			+	-1	MRLQNKHR	8	30	562.8109396896267	1123.6073264460533	2	562.8118286132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))MRLQNKHR_	REV__ENST00000258200.7_1_16:67195789-67196759:+|nuORF	13.775330524044264	0.789990904165365	1				NaN	NaN	0	NaN	412	2656	3066
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3071	14.699	NaN	5795.6	30	0	1357.8	0.106	+			30509	QAFLARLKG	9	48	335.2051010828169	NaN	0	335.18524169921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QAFLARLKG_	ENSG00000160818|ENST00000368232|GPATCH4;nc|ENSG00000160818|Q5T3I0-3|GPATCH4	24.519189625965996	0.35377483217337163	1				NaN	NaN	0	NaN	413	2656	3066
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3072	14.7	NaN	1352.5	30	0	226.32	0.106			+	23016	KVSNKLRQQ	9	34	550.8324749221287	NaN	0	550.8324584960938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KVSNKLRQQ_	REV__ENST00000487087.5_1_3:99569231-99569838:-|nuORF	32.75053402867276	0.3122164853807509	1				NaN	NaN	0	NaN	414	2656	3066
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3073	14.702	NaN	744.03	30	0	371.51	0.035			+	10501	EVSPLKKY	8	20	321.85412359752087	NaN	0	321.8538818359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EVSPLKKY_	REV__ENSG00000109270|ENST00000499666|LAMTOR3;REV__nc|ENSG00000109270|Q9UHA4-2|LAMTOR3	13.775330524044264	1.7418937515398478	1				NaN	NaN	0	NaN	415	2656	3066
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3082	14.724	NaN	1703.6	30	0	510.79	0.214			+	-1	GMSLSMLA	8	27	421.19276967656094	840.3709864199219	2	421.19281005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_GM(Oxidation (M))SLSM(Oxidation (M))LA_	REV__ENSG00000110079|ENST00000337908|MS4A4A;REV__MS4A4A|p.I71M|1|0.48|ENSG00000110079|chr11:60297208-60297208|T/G|missense_variant;REV__nc|ENSG00000110079|Q96JQ5-2|MS4A4A;REV__nc|ENSG00000214787|Q96PG1|MS4A4E	9.47055586587303	0.7831821681235687	1				NaN	NaN	0	NaN	421	2659	3081
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3083	14.727	NaN	1007.7	30	0	144.35	0.035			+	16656	HIFHPINR	8	35	517.290620642494	NaN	0	517.2911376953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HIFHPINR_	REV__nc|ENSG00000273085|Q8NGJ3|OR52E1	35.61828744233558	1.7418937515398478	1				NaN	NaN	0	NaN	422	2659	3081
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3088	14.742	NaN	3780.2	30	0	595.53	0.214	+			39616	STIATSHPK	9	50	471.25594327855526	940.4973336239105	2	471.25579833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STIATSHPK_	ENSG00000007952|ENST00000372966|NOX1;nc|ENSG00000007952|Q9Y5S8-3|NOX1	64.20726635412375	0.17854274437659667	1				NaN	NaN	0	NaN	424	2662	3087
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3089	14.746	NaN	1039.2	30	0	194.07	0.035	+			23172	KWEKVARE	8	35	523.293893899075	1044.5732348649499	2	523.293212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KWEKVARE_	ENSG00000171804|ENST00000447313|WDR87;nc|ENSG00000171804|Q6ZQQ6-2|WDR87;nc|ENSG00000171804|Q6ZQQ6|WDR87;WDR87|p.A2794Pfs*4|1|0.26|ENSG00000171804|chr19:37885175-37885175|T/-|frameshift_variant;WDR87|p.K2720Rfs*57|5|0.35|ENSG00000171804|chr19:37885395-37885395|T/-|frameshift_variant;WDR87|p.Q1927Tfs*32|1|0.44|ENSG00000171804|chr19:37887775-37887776|-/T|frameshift_variant;WDR87|p.R2063Gfs*11|1|0.12|ENSG00000171804|chr19:37887367-37887367|T/-|frameshift_variant;WDR87|p.R2063Kfs*25|1|0.32|ENSG00000171804|chr19:37887366-37887367|-/T|frameshift_variant	31.954861631926434	0.7126016770032289	1				NaN	NaN	0	NaN	425	2662	3087
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3096	14.764	NaN	2148.1	30	0	243.29	0.142	+			3933	ATASVVKEK	9	46	466.7738329422208	NaN	0	466.7738952636719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATASVVKEK_	ENSG00000160058|ENST00000455895|BSDC1;ENST00000474414.5_1_1:32849477-32859770:-|nuORF;ENST00000533084.1_1_1:32852298-32860015:-|nuORF;nc|ENSG00000160058|Q9NW68-2|BSDC1;nc|ENSG00000160058|Q9NW68-3|BSDC1;nc|ENSG00000160058|Q9NW68-5|BSDC1;nc|ENSG00000160058|Q9NW68-7|BSDC1;nc|ENSG00000160058|Q9NW68-8|BSDC1	93.1432384553994	0.0352600271724948	1				NaN	NaN	0	NaN	429	2665	3095
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3101	14.781	NaN	2783.7	30	0	439.74	0.214	+			22370	KTIDASVSKK	10	59	538.8187197835114	1075.6228866338226	2	538.8196411132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTIDASVSKK_	ENSG00000171681|ENST00000261168|ATF7IP;ENST00000535179.1_1_12:14619386-14628955:+|nuORF;ENST00000537653.5_1_12:14576849-14628955:+|nuORF;nc|ENSG00000171681|Q6VMQ6-2|ATF7IP;nc|ENSG00000171681|Q6VMQ6-4|ATF7IP;nc|ENSG00000171681|Q6VMQ6-5|ATF7IP	74.23689240530636	0.2427050549612727	1				NaN	NaN	0	NaN	431	2668	3100
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3102	14.784	NaN	1117.1	30	0	287.28	0.106	+			9952	ERCYDFKMC	9	34	597.7395554515239	NaN	0	597.7396850585938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ERCYDFKMC_	sp|P16837|UL128_HCMVAUncharacterizedproteinUL128OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL128PE=1SV=2	26.69291269510374	0.34280015626154364	1				NaN	NaN	0	NaN	432	2668	3100
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3103	14.786	NaN	2998.9	30	0	575.8	0.106	+			34770	RYHSFSSKQD	10	61	627.7977026049981	1253.5808522767961	2	627.798095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RYHSFSSKQD_	ENST00000430801.5_1_7:77290551-77325505:-|nuORF	43.41853373365257	0.517645004642704	1				NaN	NaN	0	NaN	433	2668	3100
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3104	14.788	NaN	2280.9	30	0	284.23	0.106	+			42672	TAYLHQHQK	9	60	563.2931509028904	1124.5717488725807	2	563.2937622070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TAYLHQHQK_	ENSG00000152454|ENST00000282308|ZNF256;ENSG00000173480|ENST00000312026|ZNF417;ENSG00000198466|ENST00000339656|ZNF587;ENST00000598928.1_1_19:58452294-58458975:-|nuORF;nc|ENSG00000198466|Q96SQ5-2|ZNF587;ZNF256|p.E544Dfs*7|1|0.08|ENSG00000152454|chr19:57941176-57941177|-/ATGAGTG|frameshift_variant;ZNF256|p.Y603*|1|0.08|ENSG00000152454|chr19:57940999-57941000|AT/-|frameshift_variant;ZNF417|p.R546Kfs*4|1|0.34|ENSG00000173480|chr19:57908641-57908642|-/T|frameshift_variant	65.46538089061403	0.16805504838372562	1				NaN	NaN	0	NaN	434	2668	3100
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3105	14.79	NaN	1905.5	30	0	173.1	0.106			+	-1	KMGKSCVVI	9	56	532.2849861533355	1062.5554193734708	2	532.2847290039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))KMGKSC(Carbamidomethyl (C))VVI_	REV__ENSG00000144730|ENST00000296318|IL17RD;REV__ENST00000469841.5_1_3:57131519-57204269:-|nuORF;REV__IL17RD|p.F417S|1|0.06|ENSG00000144730|chr3:57098453-57098453|A/G|missense_variant;REV__IL17RD|p.Y428H|1|0.11|ENSG00000144730|chr3:57098421-57098421|A/G|missense_variant;REV__nc|ENSG00000144730|Q8NFM7-2|IL17RD;REV__nc|ENSG00000144730|Q8NFM7-3|IL17RD;REV__nc|ENSG00000144730|Q8NFM7-4|IL17RD	51.33545320467046	0.2872990594074956	1				NaN	NaN	0	NaN	435	2668	3100
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3106	14.792	NaN	1059.2	30	0	100.38	0.034			+	34278	RTKREAGP	8	40	457.76189748857223	NaN	0	457.7619323730469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RTKREAGP_	REV__ENST00000340802.10_1_12:48499829-48501164:+|nuORF	29.14955571784316	1.7418937515398478	1				NaN	NaN	0	NaN	436	2668	3100
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3112	14.808	NaN	5851.7	30	0	792.45	0.143	+			19280	KAFQATQQK	9	67	525.2905526168332	1048.5665523004664	2	525.291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAFQATQQK_	ENSG00000145391|ENST00000274031|SETD7	123.20810148215591	0.019257656778428764	1				NaN	NaN	0	NaN	439	2671	3111
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3120	14.828	NaN	3931.7	30	0	408.92	0.214			+	33749	RPQWPLSP	8	59	490.77055381642487	979.5265546996498	2	490.7708740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RPQWPLSP_	REV__ENST00000558780.5_2_14:24651254-24657791:-|nuORF	47.91560031466742	0.6071945918984287	1				NaN	NaN	0	NaN	444	2674	3119
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3121	14.831	NaN	1420.5	30	0	218.49	0.036	+			7513	DGNQVWLYA	9	39	533.2532958984375	NaN	0	533.2532958984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DGNQVWLYA_	ENSG00000143379|ENST00000692827|SETDB1;nc|ENSG00000143379|Q15047-2|SETDB1;nc|ENSG00000143379|Q15047-3|SETDB1;nc|ENSG00000143379|Q15047|SETDB1	23.04248740728303	0.3589936788096251	1				NaN	NaN	0	NaN	445	2674	3119
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3125	14.846	NaN	4416.3	30	0	1612.4	0.144			+	-1	SICFIGRK	8	41	327.5160170904163	979.526221871449	3	327.5161437988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SIC(Carbamidomethyl (C))FIGRK_	REV__ENSG00000127249|ENST00000342695|ATP13A4;REV__nc|ENSG00000127249|Q4VNC1-2|ATP13A4;REV__nc|ENSG00000127249|Q4VNC1-3|ATP13A4	38.80614096846853	0.6637206697844082	1				NaN	NaN	0	NaN	446	2677	3124
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3132	14.867	NaN	1718.7	30	0	204.27	0.214			+	34918	SAAEVVIHA	9	49	448.74526151987726	895.4759701065545	2	448.74481201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAAEVVIHA_	REV__E4F1|p.E388Gfs*55|1|0.48|ENSG00000167967|chr16:2233539-2233540|-/G|frameshift_variant;REV__E4F1|p.E717Rfs*3|1|0.25|ENSG00000167967|chr16:2235361-2235361|C/-|frameshift_variant;REV__ENSG00000167967|ENST00000301727|E4F1;REV__ENST00000569796.1_1_16:2278422-2280215:+|nuORF	31.954861631926434	0.5046124803899898	1				NaN	NaN	0	NaN	450	2680	3131
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3133	14.87	NaN	784.11	30	0	126.18	0.034	+			45356	TVTAAHIKK	9	29	484.79725713263144	NaN	0	484.79718017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVTAAHIKK_	ENSG00000154122|ENST00000284268|ANKH;ENST00000503939.5_1_5:14741448-14751330:-|nuORF;ENST00000515517.1_1_5:14741839-14746068:-|nuORF;nc|ENSG00000154122|Q9HCJ1-2|ANKH	54.776311868738084	0.17377682019723872	1				NaN	NaN	0	NaN	451	2680	3131
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3137	14.885	NaN	2277.3	30	0	331.21	0.214			+	12885	GERTPSPASP	10	48	499.74923472109737	NaN	0	499.7492980957031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GERTPSPASP_	REV__ENSG00000143373|ENST00000336715|ZNF687;REV__nc|ENSG00000143373|Q8N1G0-2|ZNF687;REV__ZNF687|p.A639Pfs*74|1|0.27|ENSG00000143373|chr1:151288202-151288202|G/-|frameshift_variant;REV__ZNF687|p.H733Mfs*30|1|0.58|ENSG00000143373|chr1:151288603-151288603|C/-|frameshift_variant;REV__ZNF687|p.P960Lfs*23|1|0.3|ENSG00000143373|chr1:151289915-151289915|G/-|frameshift_variant;REV__ZNF687|p.R871Gfs*29|1|0.1|ENSG00000143373|chr1:151289512-151289512|A/-|frameshift_variant;REV__ZNF687|p.R939Vfs*10|1|0.08|ENSG00000143373|chr1:151289852-151289852|C/-|frameshift_variant	45.97224482568171	0.33106653400957564	1				NaN	NaN	0	NaN	452	2683	3136
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3138	14.889	NaN	2348.6	30	0	302.12	0.035			+	30338	PTSSLTATSGT	11	52	511.7540945404972	1021.4936361477944	2	511.7532653808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PTSSLTATSGT_	REV__ENSG00000117983|ENST00000529681|MUC5B	40.77816245573522	0.5472954108598816	1				NaN	NaN	0	NaN	453	2683	3136
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3143	14.903	NaN	13715	30	0	5171.9	0.214	+			32324	QTSPATLGLP	10	39	328.8500143871346	983.5282137616039	3	328.8500061035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QTSPATLGLP_	ENST00000566270.5_1_16:28996642-28997322:+|nuORF	25.57405402267927	0.6709832231498071	1				NaN	NaN	0	NaN	455	2686	3142
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3144	14.907	NaN	3129.8	30	0	1224.5	0.106	+			6502	AWWPFSSK	8	32	504.75069986987376	1007.4868468065475	2	504.7508239746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AWWPFSSK_	ENSG00000143740|ENST00000617596|SNAP47;nc|ENSG00000143740|Q5SQN1-2|SNAP47;nc|ENSG00000143740|Q5SQN1|SNAP47;SNAP47|p.A365Qfs*14|1|0.25|ENSG00000143740|chr1:227759450-227759450|C/-|frameshift_variant	18.324413293986947	0.7971860551947066	1				NaN	NaN	0	NaN	456	2686	3142
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3145	14.909	NaN	1873.3	30	0	268.7	0.106	+			33363	RHNEGWWKG	9	47	585.2864469155306	NaN	0	585.286376953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RHNEGWWKG_	nc|ENSG00000057019|Q96PD2-2|DCBLD2	31.529811441608018	0.3183796599642538	1				NaN	NaN	0	NaN	457	2686	3142
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3146	14.911	NaN	1230.1	30	0	313.31	0.106	+			12252	GATPEVLQ	8	40	407.7188447913944	813.4231366495889	2	407.71856689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GATPEVLQ_	ENSG00000100299|ENST00000216124|ARSA;nc|ENSG00000100299|P15289-2|ARSA;nc|ENSG00000100299|P15289|ARSA	50.0245360154114	0.5941082100236891	1				NaN	NaN	0	NaN	458	2686	3142
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3147	14.913	NaN	2746.8	30	0	331.64	0.036	+			39188	SSYSQVRNK	9	60	534.7753767846897	1067.5362006361793	2	534.7765502929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSYSQVRNK_	ENSG00000068878|ENST00000404125|PSME4;nc|ENSG00000068878|Q14997-2|PSME4;nc|ENSG00000068878|Q14997-3|PSME4;PSME4|p.V1190Cfs*2|1|0.15|ENSG00000068878|chr2:53897908-53897909|-/A|frameshift_variant	60.11826168202944	0.21262886028301267	1				NaN	NaN	0	NaN	459	2686	3142
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3153	14.929	NaN	2487.2	30	0	250.15	0.214	+			7224	DAKKQSTKL	9	49	509.79819936298713	1017.5818457927743	2	509.79815673828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DAKKQSTKL_	CADPS2|p.N1185Tfs*15|1|0.4|ENSG00000081803|chr7:122345632-122345632|T/-|frameshift_variant;ENSG00000081803|ENST00000449022|CADPS2;nc|ENSG00000081803|Q86UW7-2|CADPS2;nc|ENSG00000081803|Q86UW7-3|CADPS2	77.31757898189308	0.1091473830098891	1				NaN	NaN	0	NaN	462	2689	3152
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3154	14.932	NaN	2429.6	30	0	809.1	0.106			+	16768	HNAEDDFGW	9	27	545.7137923791541	1089.4130318251082	2	545.7138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HNAEDDFGW_	REV__ENSG00000150753|ENST00000280326|CCT5;REV__ENST00000423695.6_1_5:10250480-10261980:+|nuORF;REV__ENST00000509846.1_1_5:10258500-10261038:+|nuORF;REV__nc|ENSG00000150753|P48643-2|CCT5	11.511019455917149	0.6112419832031292	1				NaN	NaN	0	NaN	463	2689	3152
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3155	14.934	NaN	4465	30	0	893.89	0.106				-1	IMRYSLQECLC	11	63	736.8394788406047	1471.6644047480092	2	737.3408813476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_IMRYSLQEC(Carbamidomethyl (C))LC(Carbamidomethyl (C))_	ENST00000286181.7_1_2:201886800-201887648:-|nuORF	23.52269567125451	0.7430573033454468	1				NaN	NaN	0	NaN	464	2689	3152
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3156	14.936	NaN	1135.9	30	0	234.73	0.106	+			12333	GDKDERLI	8	32	473.25342610592816	NaN	0	473.2537841796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GDKDERLI_	LDB1|p.E353K|1|0.31|ENSG00000198728|chr10:102108272-102108272|C/T|missense_variant	31.954861631926434	1.7418937515398478	1				NaN	NaN	0	NaN	465	2689	3152
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3157	14.938	NaN	3178.2	30	0	1680.6	0.106			+	9969	ERFTRQAD	8	32	341.50512577502207	1021.4935479252663	3	341.50531005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ERFTRQAD_	REV__ENSG00000181085|ENST00000338033|MAPK15;REV__nc|ENSG00000181085|Q8TD08-2|MAPK15;REV__nc|ENSG00000181085|Q8TD08-3|MAPK15	29.14955571784316	0.7342621283720113	1				NaN	NaN	0	NaN	466	2689	3152
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3158	14.94	NaN	1006.5	30	0	229.78	0.035			+	15124	GTRELLAKI	9	35	334.20954999908486	NaN	0	334.20953369140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTRELLAKI_	REV__ENSG00000125944|ENST00000302271|HNRNPR;REV__ENSG00000135316|ENST00000369622|SYNCRIP;REV__HNRNPR|p.L367Qfs*19|1|0.05|ENSG00000125944|chr1:23313620-23313621|-/TTTAATCTCT|frameshift_variant;REV__HNRNPR|p.W594Gfs*15|1|0.23|ENSG00000125944|chr1:23310575-23310576|CA/-|frameshift_variant;REV__nc|ENSG00000125944|O43390-2|HNRNPR;REV__nc|ENSG00000125944|O43390-4|HNRNPR;REV__nc|ENSG00000271793|O60506-2|SYNCRIP;REV__nc|ENSG00000271793|O60506-3|SYNCRIP;REV__nc|ENSG00000271793|O60506-4|SYNCRIP	15.641811463095205	0.38404136392510424	1				NaN	NaN	0	NaN	467	2689	3152
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3165	14.958	NaN	4983.1	30	0	590.4	0.214	+			6153	AVQEQMRSK	9	68	538.7793545883318	1075.5441562434635	2	538.7799682617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVQEQMRSK_	ENSG00000197622|ENST00000357235|CDC42SE1	101.45984612302182	0.0377122763612125	1				NaN	NaN	0	NaN	471	2692	3164
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3166	14.961	NaN	2648.6	30	0	623.74	0.106			+	21645	KPTTRMNK	8	54	496.2712682026231	990.5279834720462	2	496.271240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_KPTTRM(Oxidation (M))NK_	REV__ENSG00000164743|ENST00000297324|C8orf48	102.7733458925114	0.2491487235419157	1				NaN	NaN	0	NaN	472	2692	3164
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3167	14.963	NaN	4454.9	30	0	854.54	0.106	+			18958	IVQNGKHFK	9	63	535.8088368531741	1069.603120773148	2	535.8094482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IVQNGKHFK_	ENSG00000163586|ENST00000295834|FABP1	102.7733458925114	0.03637199559902695	1				NaN	NaN	0	NaN	473	2692	3164
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3168	14.965	NaN	4538.4	30	0	1073.1	0.106	+			43610	TIMSGSKAK	9	55	461.7547536980636	921.4949544629272	2	461.7547607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TIMSGSKAK_	ENSG00000198901|ENST00000394249|PRC1;nc|ENSG00000198901|O43663-2|PRC1;nc|ENSG00000198901|O43663-3|PRC1;nc|ENSG00000198901|O43663-4|PRC1	50.033510581677724	0.3025703251535696	1				NaN	NaN	0	NaN	474	2692	3164
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3169	14.967	NaN	1707.9	30	0	371.91	0.106			+	16683	HIRRPLGWR	9	33	595.8551635742188	NaN	0	595.8551635742188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HIRRPLGWR_	REV__ENSG00000186788|ENST00000445385|SPATA31D3;REV__ENSG00000189357|ENST00000419782|SPATA31D4;REV__ENSG00000214929|ENST00000344803|SPATA31D1	11.511019455917149	0.3980220838287494	1				NaN	NaN	0	NaN	475	2692	3164
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3170	14.969	NaN	1946.5	30	0	314.47	0.106	+			34705	RVTYPAKAK	9	41	345.20976435990366	1032.607463679911	3	345.2097473144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RVTYPAKAK_	ENSG00000118705|ENST00000237530|RPN2;nc|ENSG00000118705|P04844-2|RPN2	39.252832667884924	0.4290233611298554	1				NaN	NaN	0	NaN	476	2692	3164
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3171	14.97	NaN	4499.2	30	0	549.67	0.038	+			43616	TINGHNAEVRK	11	67	619.8333693063972	1237.6521856795944	2	619.8330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TINGHNAEVRK_	ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;ENST00000495810.1_1_7:26235422-26236427:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1	135.09803861685143	0.0008978100578771298	1				NaN	NaN	0	NaN	477	2692	3164
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3179	14.989	NaN	790.04	30	0	166.98	0.214			+	48105	VSTRYGGL	8	37	426.73211669921875	NaN	0	426.73211669921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSTRYGGL_	REV__WDFY2|p.A156V|1|0.39|ENSG00000139668|chr13:51719330-51719330|C/T|missense_variant	47.91560031466742	1.7418937515398478	1				NaN	NaN	0	NaN	482	2695	3178
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3180	14.992	NaN	1613.2	30	0	227.28	0.106	+			5750	AVGKDYCPGL	10	49	511.7540945404972	1021.4936361477944	2	512.2578735351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVGKDYCPGL_	ATG16L1|p.I471Cfs*34|1|0.04|ENSG00000085978|chr2:233290333-233290334|-/TGCAAAC|frameshift_variant;ENST00000473865.1_1_2:234198871-234200845:+|nuORF	39.252832667884924	0.5560298534376815	1				NaN	NaN	0	NaN	483	2695	3178
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3181	14.994	NaN	1235.9	30	0	139.62	0.106			+	33751	RPRAQTVPG	9	50	491.282806719681	980.551060506162	2	491.2825012207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RPRAQTVPG_	REV__ENST00000547963.1_1_12:114183565-114183646:-|nuORF	47.657333605630114	0.33044192980041115	1				NaN	NaN	0	NaN	484	2695	3178
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3182	14.996	NaN	948.67	30	0	158.42	0.106	+			1386	AEVKKPAAA	9	37	442.7634536304589	883.5123543277178	2	442.7635192871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEVKKPAAA_	ENSG00000149257|ENST00000358171|SERPINH1	58.78195531508484	0.22376836668196862	1				NaN	NaN	0	NaN	485	2695	3178
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3183	14.998	NaN	236.56	30	0	72.505	0.106				-1	KGEDKMDGAPS	11	16	384.17425537109375	NaN	0	384.17425537109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_KGEDKM(Oxidation (M))DGAPS_	ENSG00000117569|ENST00000674951|PTBP2;ENST00000460706.5_1_1:97187363-97236440:+|nuORF;ENST00000476419.5_1_1:97187405-97272445:+|nuORF;nc|ENSG00000117569|Q9UKA9-2|PTBP2;nc|ENSG00000117569|Q9UKA9-3|PTBP2;nc|ENSG00000117569|Q9UKA9-4|PTBP2;nc|ENSG00000117569|Q9UKA9-5|PTBP2;nc|ENSG00000117569|Q9UKA9-6|PTBP2;PTBP2|p.L99Wfs*3|1|0.3|ENSG00000117569|chr1:96770711-96770711|T/-|frameshift_variant;PTBP2|p.N446Ifs*21|1|0.27|ENSG00000117569|chr1:96812873-96812873|A/-|frameshift_variant;PTBP2|p.P452Sfs*10|1|0.17|ENSG00000117569|chr1:96812888-96812889|-/T|frameshift_variant	9.64613948735714	0.456735970842152	1				NaN	NaN	0	NaN	486	2695	3178
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3184	15	NaN	671.85	30	0	153.12	0.035			+	33867	RRLGQWPP	8	24	505.2868347167969	NaN	0	505.2868347167969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RRLGQWPP_	REV__ENST00000606893.5_1_6:110501354-110532119:+|nuORF	21.70233525837049	1.7418937515398478	1				NaN	NaN	0	NaN	487	2695	3178
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3190	15.017	NaN	2325.4	30	0	441.13	0.143	+			4939	ATQQELRAK	9	55	522.7929504581452	1043.5713479830904	2	523.2948608398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATQQELRAK_	ENSG00000133392|ENST00000300036|MYH11;nc|ENSG00000133392|P35749-2|MYH11;nc|ENSG00000133392|P35749-3|MYH11;nc|ENSG00000133392|P35749-4|MYH11	91.26522074875469	0.06129826844580791	1				NaN	NaN	0	NaN	490	2698	3189
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3195	15.033	NaN	1369.2	30	0	286.65	0.214	+			17263	HYRRGLRAG	9	31	543.3063535143106	1084.598154095421	2	543.3067626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HYRRGLRAG_	ENST00000557314.5_1_14:20839728-20850189:-|nuORF	18.324413293986947	0.6112419832031293	1				NaN	NaN	0	NaN	492	2701	3194
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3196	15.037	NaN	2102.5	30	0	300.82	0.035	+			48865	VVDAHVREK	9	52	526.7956766699857	1051.5768004067713	2	526.7967529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVDAHVREK_	ENSG00000113595|ENST00000231524|TRIM23;ENST00000508808.1_1_5:64902931-64905219:-|nuORF;nc|ENSG00000113595|P36406-2|TRIM23;nc|ENSG00000113595|P36406-3|TRIM23	65.46538089061403	0.16805504838372562	1				NaN	NaN	0	NaN	493	2701	3194
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3204	15.057	NaN	3025.2	30	0	674.38	0.214	+			44366	TSKLLKNNP	9	33	338.86952584021657	1013.5867481208497	3	339.2041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSKLLKNNP_	tr|U7SRU9|U7SRU9_FUSNUCobaltABCtransporter,permeaseCbiQOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01438PE=4SV=1	18.324413293986947	0.6112419832031293	1				NaN	NaN	0	NaN	498	2704	3203
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3205	15.06	NaN	1736.1	30	0	210.76	0.036	+			48589	VTQQINERK	9	44	558.3122084363717	NaN	0	558.311767578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTQQINERK_	ARHGEF9|p.I414Nfs*18|1|0.2|ENSG00000131089|chrX:63655553-63655554|-/T|frameshift_variant;ARHGEF9|p.I414Yfs*34|1|0.28|ENSG00000131089|chrX:63655554-63655554|T/-|frameshift_variant;ENSG00000131089|ENST00000671741|ARHGEF9;nc|ENSG00000131089|O43307-2|ARHGEF9;nc|ENSG00000131089|O43307-3|ARHGEF9;nc|ENSG00000131089|O43307|ARHGEF9	52.936696900407355	0.1864545979552969	1				NaN	NaN	0	NaN	499	2704	3203
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3209	15.075	NaN	1853.9	30	0	225.17	0.214	+			7982	DSVSLRIKQ	9	52	523.3020328826026	1044.589512832005	2	523.3028564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DSVSLRIKQ_	COG7|p.F587S|1|0.21|ENSG00000168434|chr16:23403737-23403737|A/G|missense_variant	51.33545320467046	0.2872990594074956	1				NaN	NaN	0	NaN	500	2707	3208
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3210	15.078	NaN	1704.4	30	0	256.22	0.106			+	-1	KRPKAAVSC	9	47	508.7851867675781	NaN	0	508.7851867675781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_KRPKAAVSC(Carbamidomethyl (C))_	REV__nc|ENSG00000159921|Q9Y223-3|GNE	35.61828744233558	0.29773779453147337	1				NaN	NaN	0	NaN	501	2707	3208
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3211	15.08	NaN	7643	30	0	1081.6	0.106				-1	 	0	67	545.790126843474	1089.565700753748	2	545.7905883789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	502	2707	3208
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3212	15.082	NaN	1625.9	30	0	298.18	0.035	+			47893	VSLIGGPGSHI	11	44	518.7925305387649	NaN	0	518.7926025390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSLIGGPGSHI_	ENSG00000196876|ENST00000627620|SCN8A;nc|ENSG00000196876|Q9UQD0-3|SCN8A;nc|ENSG00000196876|Q9UQD0-4|SCN8A;nc|ENSG00000196876|Q9UQD0-5|SCN8A;nc|ENSG00000196876|Q9UQD0|SCN8A	32.81241826257853	0.4191849651971536	1				NaN	NaN	0	NaN	503	2707	3208
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3217	15.096	NaN	1932.8	30	0	328.6	0.214	+			3648	ASYGSTTTK	9	43	458.2241840336546	914.4338151341092	2	458.2240295410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASYGSTTTK_	ENSG00000092108|ENST00000458591|SCFD1;ENST00000555259.5_1_14:31112578-31185169:+|nuORF;nc|ENSG00000092108|Q8WVM8-2|SCFD1;nc|ENSG00000092108|Q8WVM8-3|SCFD1	37.81151784470057	0.4459294069877048	1				NaN	NaN	0	NaN	505	2710	3216
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3218	15.1	NaN	1164.3	30	0	130.69	0.035	+			2660	AQNAKVIEK	9	43	500.79293237737613	999.5713118215523	2	500.7935791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AQNAKVIEK_	ENSG00000018610|ENST00000644802|STEEP1;ENST00000469448.1_1_X:118673692-118676584:-|nuORF;nc|ENSG00000018610|Q9H5V9-2|STEEP1;nc|ENSG00000018610|Q9H5V9-3|STEEP1	63.53385203322761	0.18415635464017938	1				NaN	NaN	0	NaN	506	2710	3216
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3226	15.12	NaN	4404.2	30	0	1320.3	0.214				-1	CSLAEELRH	9	40	557.769254339787	1113.523955746374	2	557.7698974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_C(Carbamidomethyl (C))SLAEELRH_	ENSG00000184584|ENST00000330794|STING1;ENST00000507297.5_1_5:138861061-138861812:-|nuORF;ENST00000515507.5_1_5:138860386-138861812:-|nuORF	16.473147378115264	0.6112419832031293	1				NaN	NaN	0	NaN	511	2713	3225
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3227	15.123	NaN	7196.8	30	0	875.68	0.106	+			39557	STGGRTTITTK	11	75	561.8094388805026	1121.6043248278052	2	562.3109741210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STGGRTTITTK_	ENSG00000124429|ENST00000262753|POF1B;nc|ENSG00000124429|Q8WVV4-1|POF1B	82.83050618871818	0.12877585057862004	1				NaN	NaN	0	NaN	512	2713	3225
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3228	15.125	NaN	788.52	30	0	166.95	0.106			+	6812	CGRWLVYK	8	39	512.77197265625	NaN	0	512.77197265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_CGRWLVYK_	REV__AFM|p.I98Yfs*62|1|0.16|ENSG00000079557|chr4:73485878-73485878|A/-|frameshift_variant	18.324413293986947	1.7418937515398478	1				NaN	NaN	0	NaN	513	2713	3225
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3229	15.127	NaN	2029.6	30	0	635.1	0.106			+	9098	EGKKQSRMV	9	44	531.7897220353736	1061.5648911375472	2	531.790283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EGKKQSRMV_	REV__tr|U7T1Y4|U7T1Y4_FUSNUSodium:protonantiporterOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00685PE=4SV=1	49.536043120802724	0.308405419312776	1				NaN	NaN	0	NaN	514	2713	3225
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3230	15.129	NaN	1907.6	30	0	256.54	0.106			+	-1	RGWWQFCP	8	21	568.7580452745236	NaN	0	568.7586669921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_RGWWQFC(Carbamidomethyl (C))P_	REV__ENST00000469532.1_1_22:37628528-37640188:-|nuORF	8.822329726475273	1.7418937515398478	1				NaN	NaN	0	NaN	515	2713	3225
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3231	15.131	NaN	1108.1	30	0	140.36	0.106	+			46239	VEDFCNNFR	9	23	572.2470703125	NaN	0	572.2470703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VEDFCNNFR_	ENSG00000183340|ENST00000332349|JRKL;JRKL|p.D161Y|1|0.27|ENSG00000183340|chr11:96391130-96391130|G/T|missense_variant;JRKL|p.D446Gfs*26|1|0.07|ENSG00000183340|chr11:96391985-96391986|-/GTTTTACT|frameshift_variant	15.641811463095205	0.38404136392510424	1				NaN	NaN	0	NaN	516	2713	3225
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3232	15.133	NaN	960.43	30	0	196.9	0.037				-1	MGIMFYHIT	9	24	564.76318359375	NaN	0	564.76318359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_MGIM(Oxidation (M))FYHIT_	tr|U7SH92|U7SH92_FUSNUDUF2179domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02227PE=4SV=1	19.359975847455235	0.3714571876404798	1				NaN	NaN	0	NaN	517	2713	3225
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3238	15.149	NaN	7516.8	30	0	1374.6	0.214	+			44586	TTCSKVFKK	9	68	549.8018885910868	1097.5892242489736	2	549.802490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_TTC(Carbamidomethyl (C))SKVFKK_	ENSG00000167625|ENST00000301215|ZNF526	98.58198989935565	0.04066992115528678	1				NaN	NaN	0	NaN	520	2716	3237
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3239	15.152	NaN	1551.1	30	0	298.52	0.106	+			3373	ASPHRSLG	8	37	412.72223668195187	NaN	0	412.7218322753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASPHRSLG_	ENST00000569505.5_1_16:84217022-84220612:-|nuORF	44.116797842482775	1.7418937515398478	1				NaN	NaN	0	NaN	521	2716	3237
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3240	15.154	NaN	909.04	30	0	101.58	0.106			+	36642	SGLDTFVAR	9	46	483.2572326660156	NaN	0	483.2572326660156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SGLDTFVAR_	REV__ENSG00000150760|ENST00000623213|DOCK1;REV__nc|ENSG00000150760|Q14185|DOCK1	26.69291269510374	0.34280015626154364	1				NaN	NaN	0	NaN	522	2716	3237
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3241	15.156	NaN	1057.6	30	0	123.11	0.034	+			41815	SVSSPVKSK	9	36	459.76626807269116	917.5179832121823	2	459.76568603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVSSPVKSK_	ENSG00000174197|ENST00000703841|MGA;MGA|p.D2578Rfs*45|1|0.32|ENSG00000174197|chr15:41762342-41762343|-/A|frameshift_variant;MGA|p.E1249Rfs*25|2|0.28|ENSG00000174197|chr15:41729243-41729244|-/A|frameshift_variant;MGA|p.E1249Rfs*42|1|0.17|ENSG00000174197|chr15:41729244-41729244|A/-|frameshift_variant;MGA|p.H151Pfs*66|1|0.03|ENSG00000174197|chr15:41669345-41669346|-/CA|frameshift_variant;MGA|p.H151Vfs*67|1|0.05|ENSG00000174197|chr15:41669343-41669344|-/TGTTA|frameshift_variant;MGA|p.L1297Wfs*39|1|0.3|ENSG00000174197|chr15:41734566-41734566|C/-|frameshift_variant;MGA|p.N416Vfs*7|1|0.13|ENSG00000174197|chr15:41696254-41696257|CAAA/-|frameshift_variant;MGA|p.R155Efs*24|1|0.31|ENSG00000174197|chr15:41669352-41669353|-/G|frameshift_variant;MGA|p.R614Efs*7|1|0.35|ENSG00000174197|chr15:41696846-41696846|A/-|frameshift_variant;MGA|p.S2228Kfs*5|1|0.33|ENSG00000174197|chr15:41750284-41750285|-/A|frameshift_variant;MGA|p.T1916Qfs*7|1|0.4|ENSG00000174197|chr15:41749350-41749350|A/-|frameshift_variant;nc|ENSG00000174197|Q8IWI9-3|MGA;nc|ENSG00000174197|Q8IWI9|MGA	44.377184641726394	0.36891676396732553	1				NaN	NaN	0	NaN	523	2716	3237
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3249	15.174	NaN	2792.9	30	0	347.31	0.214			+	-1	GLIMYRFT	8	58	508.7631682877246	NaN	0	508.7630310058594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_GLIM(Oxidation (M))YRFT_	REV__ENSG00000115993|ENST00000332624|TRAK2;REV__nc|ENSG00000115993|O60296-2|TRAK2;REV__TRAK2|p.I759Kfs*62|1|0.06|ENSG00000115993|chr2:201381012-201381013|-/ATTTT|frameshift_variant;REV__TRAK2|p.V408Wfs*31|1|0.1|ENSG00000115993|chr2:201389475-201389476|-/CA|frameshift_variant	55.50420428727701	1.7418937515398478	1				NaN	NaN	0	NaN	528	2719	3248
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3250	15.178	NaN	4361.4	30	0	945	0.106	+			15554	GVFKETKQK	9	59	532.8091969699327	1063.6038410066653	2	532.8088989257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GVFKETKQK_	ENSG00000119927|ENST00000348367|GPAM	90.60085204095205	0.06317133949006545	1				NaN	NaN	0	NaN	529	2719	3248
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3251	15.18	NaN	874.15	30	0	252.42	0.106	+			35096	SAGAGAGETLK	11	40	481.25064309000965	960.4867332468193	2	481.25048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAGAGAGETLK_	ENSG00000141449|ENST00000424526|GREB1L;ENST00000578955.1_1_18:19057140-19088617:+|nuORF;nc|ENSG00000141449|Q9C091-3|GREB1L	35.15202426646627	0.6210751305041943	1				NaN	NaN	0	NaN	530	2719	3248
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3252	15.182	NaN	1877.1	30	0	330.43	0.106	+			14905	GTLTPARQK	9	47	486.28503474812345	970.5555165630469	2	486.2846984863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTLTPARQK_	ENSG00000100417|ENST00000216259|PMM1;ENST00000478337.1_1_22:41980122-41985809:-|nuORF;ENST00000485648.5_1_22:41980283-41985809:-|nuORF;PMM1|p.E103Sfs*6|1|0.05|ENSG00000100417|chr22:41584348-41584348|C/-|frameshift_variant	52.936696900407355	0.27249468807391813	1				NaN	NaN	0	NaN	531	2719	3248
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3253	15.184	NaN	1678.3	30	0	450.93	0.106				-1	KYHPECFIC	9	21	598.7625122070312	NaN	0	598.7625122070312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_KYHPEC(Carbamidomethyl (C))FIC_	ENSG00000106683|ENST00000336180|LIMK1;nc|ENSG00000106683|P53667-2|LIMK1;nc|ENSG00000106683|P53667-3|LIMK1;nc|ENSG00000106683|P53667-4|LIMK1	8.231297230196988	0.4072763090772754	1				NaN	NaN	0	NaN	532	2719	3248
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3254	15.185	NaN	1140.5	30	0	133.14	0.106			+	40243	STSGGKRQR	9	40	488.7693859698089	NaN	0	488.7691345214844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STSGGKRQR_	REV__ENSG00000143815|ENST00000272163|LBR	49.44154591367651	0.21054156626303966	1				NaN	NaN	0	NaN	533	2719	3248
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3255	15.187	NaN	2832.2	30	0	441.16	0.035	+			18821	ITVTSKTNK	9	57	496.29274596657456	990.5709389999491	2	496.2926330566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ITVTSKTNK_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	63.53385203322761	0.18415635464017938	1				NaN	NaN	0	NaN	534	2719	3248
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3265	15.209	NaN	187060	30	0	38785	0.214			+	38954	SSQSRVLPK	9	98	334.52927682170724	1000.5660010653218	3	334.529541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSQSRVLPK_	REV__ZNF208|p.H1219Lfs*28|1|0.18|ENSG00000160321|chr19:21971378-21971379|-/AA|frameshift_variant	64.20726635412375	0.17854274437659667	1				NaN	NaN	0	NaN	541	2722	3264
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3266	15.213	NaN	14725	30	0	1960.8	0.106			+	9199	EGRGEPEVR	9	82	514.7599495758575	1027.505346218515	2	514.7598876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EGRGEPEVR_	REV__ENST00000471517.5_1_19:38845366-38853372:+|nuORF	112.10723106719422	0.02684780151337622	1				NaN	NaN	0	NaN	542	2722	3264
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3267	15.215	NaN	13147	30	0	4614.5	0.106			+	37425	SLGRTLSLH	9	51	328.5258115902397	982.5556053709191	3	328.52587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLGRTLSLH_	REV__ENSG00000183873|ENST00000423572|SCN5A;REV__nc|ENSG00000183873|Q14524-3|SCN5A;REV__nc|ENSG00000183873|Q14524-4|SCN5A;REV__nc|ENSG00000183873|Q14524-5|SCN5A;REV__nc|ENSG00000183873|Q14524-6|SCN5A;REV__nc|ENSG00000183873|Q14524|SCN5A;REV__SCN5A|p.Y1009Tfs*136|3|0.35|ENSG00000183873|chr3:38581135-38581135|G/-|frameshift_variant	36.446750945000026	0.4619375763483977	1				NaN	NaN	0	NaN	543	2722	3264
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3268	15.217	NaN	7983.2	30	0	2436.6	0.106			+	-1	WHCFTDLE	8	44	554.2324788228739	1106.4504047125477	2	554.2329711914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_WHC(Carbamidomethyl (C))FTDLE_	REV__CCPG1|p.E676K|1|0.25|ENSG00000260916|chr15:55359747-55359747|C/T|missense_variant;REV__ENSG00000260916|ENST00000442196|CCPG1;REV__ENST00000568372.5_1_15:55651699-55664264:-|nuORF;REV__nc|ENSG00000260916|Q9ULG6-2|CCPG1;REV__nc|ENSG00000260916|Q9ULG6|CCPG1	26.79610172149135	0.7524337208463756	1				NaN	NaN	0	NaN	544	2722	3264
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3269	15.218	NaN	1857.1	30	0	532	0.106	+			6430	AVVTGIKKK	9	54	472.3184739975076	NaN	0	472.31866455078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVVTGIKKK_	ENSG00000151881|ENST00000397080|TMEM267	40.77816245573522	0.2702456086868081	1				NaN	NaN	0	NaN	545	2722	3264
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3270	15.22	NaN	8626.3	30	0	2246.6	0.106	+			50209	WMRENCCNW	9	20	621.2360666468835	1240.457580360567	2	621.2368774414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_WMRENCCNW_	ENSG00000113391|ENST00000395965|FAM172A;nc|ENSG00000113391|Q8WUF8-3|ARB2A;nc|ENSG00000113391|Q8WUF8-4|ARB2A	7.193352174278301	0.6112419832031293	1				NaN	NaN	0	NaN	546	2722	3264
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3271	15.222	NaN	7444.8	30	0	1382.6	0.035			+	-1	LTLNVECAQ	9	39	524.2587700640363	1046.5029871948725	2	524.259521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_LTLNVEC(Carbamidomethyl (C))AQ_	REV__ENSG00000187045|ENST00000676104|TMPRSS6;REV__nc|ENSG00000187045|Q8IU80-2|TMPRSS6;REV__nc|ENSG00000187045|Q8IU80-5|TMPRSS6;REV__nc|ENSG00000187045|Q8IU80|TMPRSS6;REV__TMPRSS6|p.A605Pfs*8|1|0.34|ENSG00000187045|chr22:37070539-37070539|C/-|frameshift_variant	19.1035232394073	0.6112419832031293	1				NaN	NaN	0	NaN	547	2722	3264
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3282	15.247	NaN	28542	30	0	4009.3	0.215	+			40493	STYGVTKGK	9	81	470.75846961858286	939.5023863039657	2	470.7582092285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STYGVTKGK_	ENSG00000214753|ENST00000301785|HNRNPUL2	104.01359247289065	0.03510646158778409	1				NaN	NaN	0	NaN	555	2725	3281
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3283	15.25	NaN	18569	30	0	5859.6	0.106	+			20456	KEVFDFIQ	8	56	513.2699084140867	1024.5252638949732	2	513.2698974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEVFDFIQ_	tr|U7SLI9|U7SLI9_FUSNUPolysaccharidebiosynthesisproteinCapD-likedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01946PE=3SV=1	39.252832667884924	0.6609488554722044	1				NaN	NaN	0	NaN	556	2725	3281
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3284	15.252	NaN	11351	30	0	1279.5	0.106	+			34096	RSQKPVMVK	9	79	358.21461969686516	1071.6220296907954	3	358.21466064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RSQKPVMVK_	ENSG00000108107|ENST00000344063|RPL28;ENST00000412461.2_1_22:19043875-19044022:+|nuORF;ENST00000560583.5_1_19:55899571-55899697:+|nuORF	61.76455937419982	0.19890525308472518	1				NaN	NaN	0	NaN	557	2725	3281
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3285	15.254	NaN	6432.9	30	0	1591.2	0.106			+	1556	AGGAAKKPK	9	52	414.2584449924531	826.5023370517063	2	414.25830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AGGAAKKPK_	REV__ENSG00000187837|ENST00000343677|H1-2	97.47269410471826	0.04379738608259218	1				NaN	NaN	0	NaN	558	2725	3281
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3286	15.256	NaN	3920.3	30	0	481.86	0.106	+			31426	QKNAVLNK	8	61	457.7744427040957	913.5343324749914	2	457.7742614746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QKNAVLNK_	ENSG00000150403|ENST00000434316|TMCO3;nc|ENSG00000150403|Q6UWJ1-2|TMCO3;nc|ENSG00000150403|Q6UWJ1-3|TMCO3	92.19062340807069	0.27083854825242376	1				NaN	NaN	0	NaN	559	2725	3281
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3287	15.258	NaN	3594.7	30	0	640.52	0.106	+			38615	SSGSPKFAMK	10	27	520.2642822265625	NaN	0	520.2642822265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSGSPKFAMK_	ENSG00000182979|ENST00000331320|MTA1;ENST00000469140.2_1_14:105929892-105933123:+|nuORF;MTA1|p.R546Afs*8|1|0.13|ENSG00000182979|chr14:105466433-105466433|C/-|frameshift_variant;MTA1|p.T578Pfs*18|1|0.07|ENSG00000182979|chr14:105466528-105466528|C/-|frameshift_variant;nc|ENSG00000182979|Q13330-3|MTA1	19.1035232394073	0.4201028297492154	1				NaN	NaN	0	NaN	560	2725	3281
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3288	15.259	NaN	5453.2	30	0	1449	0.036				-1	LCEELFEK	8	53	534.2555062385319	1066.4964595438637	2	534.2567749023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_LC(Carbamidomethyl (C))EELFEK_	ENSG00000054523|ENST00000676179|KIF1B;KIF1B|p.N365Mfs*8|1|0.32|ENSG00000054523|chr1:10278037-10278037|C/-|frameshift_variant;nc|ENSG00000054523|O60333-2|KIF1B;nc|ENSG00000054523|O60333-3|KIF1B;nc|ENSG00000054523|O60333-4|KIF1B	31.954861631926434	0.7126016770032289	1				NaN	NaN	0	NaN	561	2725	3281
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3298	15.281	NaN	11798	30	0	1602.5	0.214	+			14333	GSYVTHETK	9	73	511.25129334194077	1020.4880337506816	2	511.2509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSYVTHETK_	ENSG00000088986|ENST00000242577|DYNLL1;ENSG00000264364|ENST00000579991|DYNLL2;ENST00000552316.1_1_12:120935833-120936010:+|nuORF	79.48907831485694	0.09975780661107167	1				NaN	NaN	0	NaN	568	2728	3297
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3299	15.285	NaN	9319.7	30	0	6216.7	0.106	+			42426	TAKTPGPPG	9	39	413.2268460014294	824.4391390696588	2	413.2267150878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAKTPGPPG_	ENST00000291750.6_1_19:20829180-20844320:-|nuORF;ENST00000360204.5_1_19:20959154-20975331:+|nuORF;ENST00000450302.2_1_7:64838841-64853745:+|nuORF;ENST00000488849.1_1_7:64838847-64852976:+|nuORF;ENST00000596476.1_1_19:21106143-21116843:+|nuORF;ENST00000599885.1_2_19:21106143-21117778:+|nuORF	39.252832667884924	0.4290233611298554	1				NaN	NaN	0	NaN	569	2728	3297
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3300	15.287	NaN	8264.7	30	0	1702.6	0.106	+			41329	SVLSGGKAK	9	58	423.7557278639204	845.4969027946408	2	423.755615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVLSGGKAK_	ENSG00000130429|ENST00000646101|ARPC1B;ENST00000491294.1_1_7:98988810-98991817:+|nuORF	101.60071028292904	0.0375685401170269	1				NaN	NaN	0	NaN	570	2728	3297
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3301	15.288	NaN	5405.3	30	0	1666.7	0.106	+			38584	SSFYNTKKK	9	65	551.7979435899213	1101.5813342466424	2	551.7987670898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSFYNTKKK_	ENSG00000169692|ENST00000371696|AGPAT2;ENST00000472820.1_1_9:139568206-139571631:-|nuORF;nc|ENSG00000169692|O15120-2|AGPAT2	118.74307786436346	0.02196067127630568	1				NaN	NaN	0	NaN	571	2728	3297
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3302	15.29	NaN	2328.1	30	0	360.39	0.106	+			5170	ATTEYVQKK	9	47	534.2897291975661	1066.564905461932	2	534.2909545898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATTEYVQKK_	ENSG00000130957|ENST00000375337|FBP2	58.22992032128504	0.22837015374068087	1				NaN	NaN	0	NaN	572	2728	3297
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3303	15.292	NaN	1316.6	30	0	217.64	0.106	+			22908	KVMTKVIKK	9	35	537.8577270507812	NaN	0	537.8577270507812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KVMTKVIKK_	ENSG00000168016|ENST00000645898|TRANK1;nc|ENSG00000168016|O15050|TRANK1;TRANK1|p.F2073Lfs*13|1|0.1|ENSG00000168016|chr3:36833232-36833232|A/-|frameshift_variant;TRANK1|p.P972Qfs*12|1|0.34|ENSG00000168016|chr3:36856675-36856675|G/-|frameshift_variant;TRANK1|p.V1077Wfs*30|1|0.29|ENSG00000168016|chr3:36856362-36856362|T/-|frameshift_variant	47.95952297671804	0.22075498469600283	1				NaN	NaN	0	NaN	573	2728	3297
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3304	15.294	NaN	741.15	30	0	206.71	0.034			+	-1	ELGCRKCV	8	12	482.7373631443751	963.4601733555502	2	482.7372131347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_ELGC(Carbamidomethyl (C))RKCV_	REV__ENST00000483520.1_1_X:47705703-47720212:+|nuORF	12.959181472943097	0.7887000251064199	1				NaN	NaN	0	NaN	574	2728	3297
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3312	15.312	NaN	4446.9	30	0	773.07	0.215	+			5263	ATVDKTVCK	9	65	511.27128334175325	1020.5280137503065	2	511.2713928222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_ATVDKTVC(Carbamidomethyl (C))K_	ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1670Tfs*23|1|0.29|ENSG00000174231|chr17:1659487-1659487|C/-|frameshift_variant	98.62937762414208	0.04060045538121712	1				NaN	NaN	0	NaN	579	2731	3311
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3313	15.316	NaN	2409.2	30	0	344.68	0.106	+			40885	SVFKSARQK	9	51	525.8062340304384	1049.5979151276767	2	525.8063354492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVFKSARQK_	ENSG00000080503|ENST00000349721|SMARCA2;nc|ENSG00000080503|P51531-2|SMARCA2	49.536043120802724	0.308405419312776	1				NaN	NaN	0	NaN	580	2731	3311
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3314	15.318	NaN	1339.3	30	0	181.02	0.106			+	-1	GCVVLTDGLA	10	42	502.7585228592789	NaN	0	502.7579040527344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_GC(Carbamidomethyl (C))VVLTDGLA_	REV__ENST00000447436.5_1_3:49713498-49713612:+|nuORF	30.503639358989545	0.4000169810673414	1				NaN	NaN	0	NaN	581	2731	3311
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3315	15.319	NaN	1005.6	30	0	144.45	0.035				-1	CHLPVFSW	8	14	523.2508544921875	NaN	0	523.2508544921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_C(Carbamidomethyl (C))HLPVFSW_	ENSG00000167207|ENST00000647318|NOD2;nc|ENSG00000167207|Q9HC29|NOD2;NOD2|p.P528Qfs*235|4|0.37|ENSG00000167207|chr16:50711488-50711488|C/-|frameshift_variant;NOD2|p.S506Pfs*11|2|0.28|ENSG00000167207|chr16:50711420-50711420|G/-|frameshift_variant;NOD2|p.S506Vfs*73|1|0.24|ENSG00000167207|chr16:50711419-50711420|-/G|frameshift_variant	5.08689130490037	1.7418937515398478	1				NaN	NaN	0	NaN	582	2731	3311
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3323	15.34	NaN	4984.4	30	0	669.78	0.214	+			14171	GSQAGGSQTLK	11	57	517.2672575812818	1032.5199622293635	2	517.2677001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSQAGGSQTLK_	ENSG00000125354|ENST00000394610|SEPTIN6;ENST00000467310.1_1_X:118753883-118767379:-|nuORF;ENST00000481072.1_1_X:118763279-118767388:-|nuORF;nc|ENSG00000125354|Q14141-4|SEPTIN6;nc|ENSG00000125354|Q14141|SEPTIN6	147.30332882356183	7.500266899103772E-05	1				NaN	NaN	0	NaN	587	2734	3322
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3324	15.343	NaN	1249.4	30	0	171.44	0.03	+			29981	PPAVAAAG	8	40	327.18436399892806	652.3541750646561	2	327.1843566894531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PPAVAAAG_	ANO8|p.P1010Lfs*309|1|0.21|ENSG00000074855|chr19:17325019-17325019|G/-|frameshift_variant;ENSG00000106415|ENST00000223145|GLCCI1;ENSG00000112238|ENST00000369215|PRDM13	33.49298260027079	0.7007254697536482	1				NaN	NaN	0	NaN	588	2734	3322
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3329	15.358	NaN	4920.7	30	0	749.84	0.214	+			38215	SQGPISKPK	9	56	471.2742829333251	940.5340129334502	2	471.2741394042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SQGPISKPK_	BRD2|p.G595Vfs*6|1|0.59|ENSG00000204256|chr6:32978327-32978327|G/-|frameshift_variant;ENSG00000204256|ENST00000374825|BRD2;ENST00000463639.1_1_6:32945329-32946166:+|nuORF;nc|ENSG00000204256|P25440-2|BRD2;nc|ENSG00000204256|P25440-3|BRD2;nc|ENSG00000204256|P25440-4|BRD2	45.02220120713402	0.3613509778819777	1				NaN	NaN	0	NaN	590	2737	3328
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3330	15.362	NaN	1563.4	30	0	251.03	0.106			+	45231	TVPPAPHG	8	42	388.20830333640464	774.4020537396093	2	388.20849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVPPAPHG_	REV__ENSG00000140022|ENST00000614646|STON2;REV__ENST00000555284.1_1_14:81736911-81745120:-|nuORF;REV__nc|ENSG00000140022|Q8WXE9-3|STON2;REV__nc|ENSG00000140022|Q8WXE9|STON2;REV__STON2|p.K469Nfs*33|1|0.15|ENSG00000140022|chr14:81277904-81277904|T/-|frameshift_variant	23.036711822280957	0.7814608874307191	1				NaN	NaN	0	NaN	591	2737	3328
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3331	15.363	NaN	615.04	30	0	156.06	0.106				-1	 	0	24	340.6949846690577	NaN	0	340.69500732421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	592	2737	3328
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3332	15.365	NaN	1048.5	30	0	174.03	0.106	+			32877	RDGYISHR	8	48	502.25921630859375	NaN	0	502.25921630859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RDGYISHR_	ENSG00000175544|ENST00000325656|CABP4;ENST00000545777.1_1_11:67223622-67225073:+|nuORF;nc|ENSG00000175544|P57796-2|CABP4	35.61828744233558	1.7418937515398478	1				NaN	NaN	0	NaN	593	2737	3328
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3333	15.367	NaN	1461.6	30	0	234.5	0.106				-1	RCRLMKDTCN	10	32	656.798828125	NaN	0	656.798828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C),Oxidation (M)	_RC(Carbamidomethyl (C))RLM(Oxidation (M))KDTCN_	DMTF1|p.N415Tfs*28|1|0.3|ENSG00000135164|chr7:87188128-87188128|A/-|frameshift_variant;ENSG00000135164|ENST00000331242|DMTF1;ENST00000425406.5_1_7:86811523-86817410:+|nuORF;ENST00000447863.5_1_7:86811523-86824453:+|nuORF;ENST00000582887.1_1_7:86811523-86815316:+|nuORF;nc|ENSG00000135164|Q9Y222-5|DMTF1	19.1035232394073	0.4201028297492154	1				NaN	NaN	0	NaN	594	2737	3328
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3334	15.369	NaN	981.52	30	0	227.78	0.035				-1	MKRSCIKK	8	34	505.2874555222901	NaN	0	505.2872619628906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_M(Oxidation (M))KRSCIKK_	ENST00000511015.1_1_5:462049-462112:+|nuORF	24.20275056022122	1.7418937515398478	1				NaN	NaN	0	NaN	595	2737	3328
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3340	15.385	NaN	3492.3	30	0	694.18	0.214	+			45690	VAAGISNIQAG	11	57	500.7749605078257	999.5353680824514	2	500.77545166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VAAGISNIQAG_	CON__Q95M17	46.45678178249821	0.46959456050452836	1				NaN	NaN	0	NaN	598	2740	3339
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3341	15.389	NaN	2717.8	30	0	587.48	0.106	+			13098	GGAESHTFK	9	57	467.2249151930689	932.4352774529378	2	467.22479248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GGAESHTFK_	ENSG00000213145|ENST00000392531|CRIP1;ENST00000460900.1_1_14:105954779-105954845:+|nuORF;ENST00000496700.5_1_14:105954601-105954845:+|nuORF	98.62937762414208	0.04060045538121712	1				NaN	NaN	0	NaN	599	2740	3339
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3342	15.391	NaN	2090.6	30	0	655.74	0.106			+	14270	GSVAVMGETEQ	11	50	554.253695771765	1106.49283861033	2	554.2546997070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GSVAVMGETEQ_	REV__ENSG00000100281|ENST00000216106|HMGXB4;REV__ENST00000418170.5_1_22:35660034-35689641:+|nuORF	49.536043120802724	0.4274608637932522	1				NaN	NaN	0	NaN	600	2740	3339
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3343	15.392	NaN	7609.3	30	0	1862.4	0.036				-1	 	0	67	545.8079845832651	1089.6014162333302	2	545.8095092773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	601	2740	3339
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3348	15.407	NaN	13832	30	0	8618.8	0.214	+			6234	AVSEGTKAVTK	11	46	364.20816511757164	1089.602665952915	3	364.2082214355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVSEGTKAVTK_	ENSG00000124635|ENST00000339812|H2BC11;ENSG00000146047|ENST00000274764|H2BC1;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000196890|ENST00000693095|H2BC26;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000369385.5_1_1:149814898-149814982:+|nuORF;ENST00000436555.1_1_1:228651916-228652012:-|nuORF;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;nc|ENSG00000203814|Q5QNW6-2|H2BC18;nc|ENSG00000285480|A0A2R8Y619|H2BK1	41.42661286455405	0.5384226294179143	1				NaN	NaN	0	NaN	603	2743	3347
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3349	15.41	NaN	2826.2	30	0	1083.8	0.106			+	20234	KELTEVHRC	9	32	557.7876168659918	1113.5606807987836	2	557.78857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KELTEVHRC_	REV__ENSG00000136694|ENST00000259211|IL36A	20.030474535948922	0.6112419832031293	1				NaN	NaN	0	NaN	604	2743	3347
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3350	15.412	NaN	1637.4	30	0	355.01	0.035	+			44918	TVAGRMVKK	9	48	495.29968336118657	988.5848137891732	2	495.299560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVAGRMVKK_	ENSG00000197321|ENST00000355867|SVIL;nc|ENSG00000197321|O95425-2|SVIL;nc|ENSG00000197321|O95425-3|SVIL;nc|ENSG00000197321|O95425-4|SVIL;SVIL|p.M1863Dfs*18|1|0.28|ENSG00000197321|chr10:29471186-29471187|-/C|frameshift_variant;SVIL|p.M1863Wfs*44|8|0.39|ENSG00000197321|chr10:29471187-29471187|C/-|frameshift_variant;SVIL|p.N2095Kfs*36|1|0.25|ENSG00000197321|chr10:29462394-29462395|-/T|frameshift_variant	59.93077597824379	0.21419174904018318	1				NaN	NaN	0	NaN	605	2743	3347
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3356	15.427	NaN	2444.1	30	0	356.99	0.214	+			35969	SEGTKAVTK	9	54	460.75611217114744	919.4976714090949	2	460.7558288574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEGTKAVTK_	ENSG00000124635|ENST00000339812|H2BC11;ENSG00000146047|ENST00000274764|H2BC1;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000196890|ENST00000693095|H2BC26;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000369385.5_1_1:149814898-149814982:+|nuORF;ENST00000436555.1_1_1:228651916-228652012:-|nuORF;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;HIST1H2BD|p.Y122H|1|0.36|ENSG00000158373|chr6:26158533-26158533|T/C|missense_variant;nc|ENSG00000203814|Q5QNW6-2|H2BC18;nc|ENSG00000285480|A0A2R8Y619|H2BK1	96.66504779109242	0.04607440320619715	1				NaN	NaN	0	NaN	608	2746	3355
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3357	15.431	NaN	1697.8	30	0	382	0.037			+	-1	CADPFHVGLQ	10	25	572.264744533126	1142.5149361330518	2	572.2659301757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_C(Carbamidomethyl (C))ADPFHVGLQ_	REV__ENST00000466041.1_1_7:55495935-55499010:+|nuORF	14.864876125193954	0.7409144161711139	1				NaN	NaN	0	NaN	609	2746	3355
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3361	15.445	NaN	3380.2	30	0	696.06	0.214				-1	KTMELDSSLP	10	37	568.776912036707	1135.539271140214	2	568.77734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_KTM(Oxidation (M))ELDSSLP_	KMO|p.V421Gfs*65|1|0.29|ENSG00000117009|chr1:241590255-241590256|-/A|frameshift_variant	26.69291269510374	0.6618461711292317	1				NaN	NaN	0	NaN	610	2749	3360
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3362	15.449	NaN	1544.7	30	0	336.05	0.106			+	-1	ERTNHLCKA	9	27	564.782471222429	1127.5503895116578	2	564.7828369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_ERTNHLC(Carbamidomethyl (C))KA_	REV__ENSG00000159173|ENST00000361379|TNNI1	10.865556482863946	0.6112419832031292	1				NaN	NaN	0	NaN	611	2749	3360
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3363	15.451	NaN	1235.5	30	0	516.15	0.106			+	-1	PNKWCMLEC	9	21	598.7509155273438	NaN	0	598.7509155273438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_PNKWCM(Oxidation (M))LEC(Carbamidomethyl (C))_	REV__ENST00000577439.1_1_18:5241093-5241812:+|nuORF;REV__ENST00000582363.1_1_18:5241075-5241255:+|nuORF	7.690282842768113	0.40727630907727536	1				NaN	NaN	0	NaN	612	2749	3360
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3364	15.452	NaN	2072.2	30	0	843.4	0.106	+			5709	AVFGPQLQGA	10	40	329.84585738727856	NaN	0	329.5115051269531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVFGPQLQGA_	ENSG00000136367|ENST00000419474|ZFHX2	19.359975847455235	0.4201028297492154	1				NaN	NaN	0	NaN	613	2749	3360
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3365	15.454	NaN	1595.5	30	0	362.19	0.106	+			6495	AWHIRLKQ	8	45	526.3122889510843	NaN	0	526.3120727539062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AWHIRLKQ_	ENSG00000081019|ENST00000261441|RSBN1;ENST00000476412.5_1_1:114308604-114340019:-|nuORF	26.79610172149135	1.7418937515398478	1				NaN	NaN	0	NaN	614	2749	3360
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3366	15.456	NaN	1822.1	30	0	246.27	0.035	+			47692	VSEGTKAVTK	10	43	510.2901306152344	NaN	0	510.2901306152344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VSEGTKAVTK_	ENSG00000124635|ENST00000339812|H2BC11;ENSG00000146047|ENST00000274764|H2BC1;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000196890|ENST00000693095|H2BC26;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000369385.5_1_1:149814898-149814982:+|nuORF;ENST00000436555.1_1_1:228651916-228652012:-|nuORF;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;HIST1H2BD|p.Y122H|1|0.36|ENSG00000158373|chr6:26158533-26158533|T/C|missense_variant;nc|ENSG00000203814|Q5QNW6-2|H2BC18;nc|ENSG00000285480|A0A2R8Y619|H2BK1	58.2462437865262	0.2485996375737153	1				NaN	NaN	0	NaN	615	2749	3360
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3371	15.472	NaN	18996	30	0	4194.7	0.211	+			2728	AQVYLEEMSWN	11	83	685.3080199971231	1368.601487061046	2	685.3079223632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AQVYLEEMSWN_	ENSG00000170946|ENST00000465995|DNAJC24;ENST00000526042.5_1_11:31443660-31447922:+|nuORF;ENST00000527731.1_1_11:31436399-31447922:+|nuORF;ENST00000530125.1_1_11:31438740-31451945:+|nuORF	39.252832667884924	0.5681665794958463	1				NaN	NaN	0	NaN	617	2752	3370
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3372	15.476	NaN	1158.6	30	0	428.12	0.106				-1	CRGEPRVL	8	25	493.76353593673804	NaN	0	493.76336669921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_C(Carbamidomethyl (C))RGEPRVL_	nc|ENSG00000141736|P04626-6|ERBB2	18.324413293986947	1.7418937515398478	1				NaN	NaN	0	NaN	618	2752	3370
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3373	15.478	NaN	1296.3	30	0	127.05	0.037			+	31056	QEWFGSNPR	9	49	560.76416015625	NaN	0	560.76416015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QEWFGSNPR_	REV__ENSG00000167065|ENST00000334679|DUSP18	39.252832667884924	0.27938773122138094	1				NaN	NaN	0	NaN	619	2752	3370
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3380	15.494	NaN	4600.4	30	0	532.49	0.211				-1	AMMDFFNAQMR	11	73	697.2880145814764	1392.5614762297528	2	697.2886352539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_AM(Oxidation (M))M(Oxidation (M))DFFNAQMR_	ENSG00000063244|ENST00000308924|U2AF2;nc|ENSG00000063244|P26368-2|U2AF2;U2AF2|p.L178Afs*15|1|0.42|ENSG00000063244|chr19:55662539-55662540|-/G|frameshift_variant	31.529811441608018	0.6590691889962369	1				NaN	NaN	0	NaN	623	2755	3379
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3381	15.498	NaN	2242.9	30	0	220.72	0.106	+			23931	LDPSNSHGEN	10	44	535.2308973525277	1068.4472417718553	2	535.23095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LDPSNSHGEN_	UNC80|p.P551L|1|0.45|ENSG00000144406|chr2:209817911-209817911|C/T|missense_variant	24.519189625965996	0.6795976720565101	1				NaN	NaN	0	NaN	624	2755	3379
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3382	15.5	NaN	2392.3	30	0	734.01	0.106			+	-1	RFMEDTCYACD	11	48	734.2683788383262	1466.5222047434522	2	734.2677001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_RFMEDTC(Carbamidomethyl (C))YAC(Carbamidomethyl (C))D_	REV__ENSG00000132470|ENST00000200181|ITGB4;REV__ENST00000580542.5_1_17:73720783-73737087:+|nuORF;REV__ITGB4|p.A1304Pfs*140|1|0.27|ENSG00000132470|chr17:75752287-75752287|G/-|frameshift_variant;REV__ITGB4|p.E666Rfs*103|1|0.29|ENSG00000132470|chr17:75737326-75737326|G/-|frameshift_variant;REV__ITGB4|p.P1123Lfs*37|1|0.47|ENSG00000132470|chr17:75750158-75750158|C/-|frameshift_variant;REV__ITGB4|p.T1720Rfs*13|1|0.05|ENSG00000132470|chr17:75757046-75757052|GACCACT/-|frameshift_variant;REV__nc|ENSG00000132470|P16144-2|ITGB4;REV__nc|ENSG00000132470|P16144-3|ITGB4;REV__nc|ENSG00000132470|P16144-4|ITGB4;REV__nc|ENSG00000132470|P16144-5|ITGB4	9.705651100619752	0.8250432705525658	1				NaN	NaN	0	NaN	625	2755	3379
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3383	15.502	NaN	803.55	30	0	229.59	0.106	+			34564	RVLGQYSG	8	28	440.23738124267123	878.4602095521425	2	440.23724365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RVLGQYSG_	ENSG00000063015|ENST00000317338|SEZ6;nc|ENSG00000063015|Q53EL9-2|SEZ6;nc|ENSG00000063015|Q53EL9-3|SEZ6;SEZ6|p.P892Hfs*50|1|0.15|ENSG00000063015|chr17:28957062-28957062|G/-|frameshift_variant	20.481830146152948	0.8005983782650069	1				NaN	NaN	0	NaN	626	2755	3379
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3384	15.503	NaN	1981.6	30	0	244.58	0.106	+			13738	GQCGNQIGAK	10	49	516.7481884413822	1031.4818239495644	2	516.7481689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_GQC(Carbamidomethyl (C))GNQIGAK_	CON__ENSEMBL:ENSBTAP00000025008;ENSG00000101162|ENST00000217133|TUBB1;ENSG00000104833|ENST00000264071|TUBB4A;ENSG00000137267|ENST00000333628|TUBB2A;ENSG00000137285|ENST00000259818|TUBB2B;ENSG00000173213|ENST00000308911|TUBB8B;ENSG00000188229|ENST00000340384|TUBB4B;ENSG00000196230|ENST00000327892|TUBB;ENSG00000258947|ENST00000315491|TUBB3;ENSG00000261456|ENST00000568584|TUBB8;ENST00000489942.1_1_6:3155224-3157697:-|nuORF;ENST00000554116.5_1_16:89989809-89998148:+|nuORF;ENST00000554927.1_1_16:89989809-89999206:+|nuORF;ENST00000604929.1_1_9:140135770-140136775:+|nuORF;TUBB|p.G142Afs*23|1|0.35|ENSG00000196230|chr6:30723483-30723483|G/-|frameshift_variant;TUBB2B|p.D177Hfs*21|1|0.32|ENSG00000137285|chr6:3225559-3225560|TC/-|frameshift_variant;TUBB4A|p.G141Vfs*24|2|0.35|ENSG00000104833|chr19:6496077-6496077|C/-|frameshift_variant	82.24051045832904	0.17731618517892733	1				NaN	NaN	0	NaN	627	2755	3379
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3385	15.505	NaN	1773.8	30	0	372.11	0.106	+			40155	STQQEKETIAK	11	41	631.833251953125	NaN	0	631.833251953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STQQEKETIAK_	ENSG00000116459|ENST00000369722|ATP5PB	21.39525786492562	0.456735970842152	1				NaN	NaN	0	NaN	628	2755	3379
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3386	15.507	NaN	1760.4	30	0	115.99	0.041			+	-1	CCIFVMCFSEM	11	48	713.7684936523438	NaN	0	713.7684936523438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))C(Carbamidomethyl (C))IFVMCFSEM_	REV__ENSG00000124140|ENST00000243964|SLC12A5;REV__ENST00000372315.4_1_20:44657854-44669254:+|nuORF;REV__nc|ENSG00000124140|Q9H2X9|SLC12A5;REV__SLC12A5|p.E1019Kfs*40|1|0.54|ENSG00000124140|chr20:46056436-46056436|G/-|frameshift_variant	21.9598887501803	0.456735970842152	1				NaN	NaN	0	NaN	629	2755	3379
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3390	15.522	NaN	4969.1	30	0	683.22	0.214	+			39232	STAKHVFEK	9	57	349.5259247005916	1045.5559447019748	3	349.5259704589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STAKHVFEK_	ENSG00000184445|ENST00000333479|KNTC1;ENST00000436959.7_1_12:123087118-123101977:+|nuORF;KNTC1|p.K1646Nfs*2|2|0.35|ENSG00000184445|chr12:122603073-122603073|A/-|frameshift_variant;KNTC1|p.K1646Tfs*12|1|0.13|ENSG00000184445|chr12:122603073-122603074|AA/-|frameshift_variant;KNTC1|p.L1647Tfs*12|1|0.3|ENSG00000184445|chr12:122603072-122603073|-/A|frameshift_variant;nc|ENSG00000184445|P50748-2|KNTC1	63.53385203322761	0.18415635464017938	1				NaN	NaN	0	NaN	630	2758	3389
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3391	15.525	NaN	2359.8	30	0	428.44	0.106				-1	GTDEHVVCK	9	49	522.7426687348772	1043.4707845365542	2	522.7424926757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GTDEHVVC(Carbamidomethyl (C))K_	nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM	47.657333605630114	0.33044192980041115	1				NaN	NaN	0	NaN	631	2758	3389
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3392	15.527	NaN	2693	30	0	276.79	0.106	+			40789	SVDQAGKYSK	10	66	541.7773341726357	1081.5401154120714	2	541.7774047851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVDQAGKYSK_	ENSG00000124383|ENST00000244230|MPHOSPH10	82.49433358170734	0.17524247213410465	1				NaN	NaN	0	NaN	632	2758	3389
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3393	15.529	NaN	2959.1	30	0	1048.2	0.106	+			43548	THKPHFMALH	10	43	609.8150731747751	1217.61559341635	2	609.8145751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_THKPHFMALH_	ENSG00000068383|ENST00000368594|INPP5A;INPP5A|p.N116Tfs*25|3|0.35|ENSG00000068383|chr10:132690427-132690427|A/-|frameshift_variant;JAG1-INPP5A|1|fusion	25.125986553469783	0.6746423231557295	1				NaN	NaN	0	NaN	633	2758	3389
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3394	15.531	NaN	2349.8	30	0	247.17	0.106			+	22218	KSVDSKAR	8	43	445.7563218133783	889.4980906935566	2	445.75616455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KSVDSKAR_	REV__CASP8AP2|p.D1810Mfs*3|1|0.43|ENSG00000118412|chr6:89868711-89868711|A/-|frameshift_variant;REV__CASP8AP2|p.E1628Mfs*58|1|0.49|ENSG00000118412|chr6:89868163-89868164|-/AT|frameshift_variant;REV__CASP8AP2|p.K342Nfs*2|1|0.33|ENSG00000118412|chr6:89862730-89862730|A/-|frameshift_variant;REV__CASP8AP2|p.N1236Ifs*9|1|0.3|ENSG00000118412|chr6:89866990-89866990|A/-|frameshift_variant;REV__CASP8AP2|p.N1917Kfs*4|1|0.24|ENSG00000118412|chr6:89869034-89869035|-/A|frameshift_variant;REV__CASP8AP2|p.T602Qfs*8|1|0.14|ENSG00000118412|chr6:89863510-89863510|A/-|frameshift_variant;REV__ENSG00000118412|ENST00000551025|CASP8AP2;REV__ENST00000237177.10_1_6:90556308-90583533:+|nuORF;REV__nc|ENSG00000118412|Q9UKL3|CASP8AP2	30.503639358989545	0.7238069182250283	1				NaN	NaN	0	NaN	634	2758	3389
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3395	15.533	NaN	775.57	30	0	289.34	0.106	+			21544	KNTGSKVLK	9	24	487.802734375	NaN	0	487.802734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KNTGSKVLK_	ENST00000503463.5_1_17:46908399-46925578:+|nuORF	12.811709888998246	0.3936198799427492	1				NaN	NaN	0	NaN	635	2758	3389
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3396	15.534	NaN	1074.5	30	0	185.3	0.035	+			19596	KDELKKKK	8	36	508.82677226547486	NaN	0	508.82672119140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KDELKKKK_	ENSG00000181904|ENST00000394976|C5orf24;nc|nan|Q7Z6I8-2|C5orf24	25.57405402267927	1.7418937515398478	1				NaN	NaN	0	NaN	636	2758	3389
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3404	15.553	NaN	5629.7	30	0	2390.6	0.214			+	379	AARWTRWK	8	51	358.8695507101389	1073.5868227306169	3	358.8695373535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AARWTRWK_	REV__NKPD1|p.H556Tfs*?|1|0.44|ENSG00000179846|chr19:45152105-45152105|G/-|frameshift_variant	47.91560031466742	0.6071945918984287	1				NaN	NaN	0	NaN	641	2761	3403
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3405	15.556	NaN	2939.3	30	0	663.56	0.106			+	-1	SKCEIGCRP	9	40	553.7576778494666	1105.5008027657332	2	553.7586669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_SKC(Carbamidomethyl (C))EIGC(Carbamidomethyl (C))RP_	REV__ENSG00000131043|ENST00000320849|AAR2	25.57405402267927	0.5642445186134241	1				NaN	NaN	0	NaN	642	2761	3403
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3406	15.558	NaN	3067.2	30	0	567.44	0.106	+			31876	QPYLPLPE	8	33	478.75872457298857	955.5028962127772	2	478.7589416503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QPYLPLPE_	ENSG00000081818|ENST00000194152|PCDHB4;ENSG00000113205|ENST00000231130|PCDHB3;ENSG00000113209|ENST00000231134|PCDHB5;ENSG00000113211|ENST00000231136|PCDHB6;ENSG00000113248|ENST00000231173|PCDHB15;ENSG00000120322|ENST00000239444|PCDHB8;ENSG00000120324|ENST00000239446|PCDHB10;ENSG00000120327|ENST00000239449|PCDHB14;ENSG00000120328|ENST00000239450|PCDHB12;ENSG00000177839|ENST00000316105|PCDHB9;ENSG00000187372|ENST00000341948|PCDHB13;ENSG00000197479|ENST00000354757|PCDHB11;nc|ENSG00000120327|Q9Y5E9-2|PCDHB14;nc|ENSG00000120328|Q9Y5F1-2|PCDHB12;nc|ENSG00000197479|Q9Y5F2-2|PCDHB11;PCDHB15|p.A676V|1|0.38|ENSG00000113248|chr5:141247605-141247605|C/T|missense_variant;PCDHB8|p.G781Wfs*9|1|0.43|ENSG00000120322|chr5:141180370-141180371|-/T|frameshift_variant	20.481830146152948	0.8005983782650069	1				NaN	NaN	0	NaN	643	2761	3403
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3407	15.56	NaN	942.27	30	0	259.31	0.106				-1	MLVSMSSA	8	28	421.1928485291923	840.3711441251846	2	421.1929931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_MLVSM(Oxidation (M))SSA_	ENSG00000176136|ENST00000589410|MC5R;MC5R|p.F297Lfs*11|1|0.07|ENSG00000176136|chr18:13826652-13826653|-/T|frameshift_variant	19.359975847455235	0.7988239741663654	1				NaN	NaN	0	NaN	644	2761	3403
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3408	15.562	NaN	1324.3	30	0	207.41	0.035			+	-1	AFMGHWLGA	9	36	503.2353601091416	1004.4561672850832	2	503.2355041503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_AFM(Oxidation (M))GHWLGA_	REV__DIP2B|p.A1021Cfs*11|1|0.32|ENSG00000066084|chr12:50721279-50721280|-/CTGTATGCAC|frameshift_variant;REV__DIP2B|p.I979Afs*17|1|0.13|ENSG00000066084|chr12:50718790-50718815|AAATAGAAGAGAATGATTTGGTGAGG/-|frameshift_variant;REV__DIP2B|p.V1240Dfs*9|1|0.05|ENSG00000066084|chr12:50731445-50731446|-/ATATTTAC|frameshift_variant;REV__DIP2B|p.V893Gfs*91|1|0.06|ENSG00000066084|chr12:50714417-50714418|-/G|frameshift_variant;REV__ENSG00000066084|ENST00000301180|DIP2B	29.841539824830324	0.5243625958137083	1				NaN	NaN	0	NaN	645	2761	3403
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3416	15.581	NaN	2866.6	30	0	1635.6	0.214			+	-1	ADVLLMLLA	9	32	325.5257568359375	NaN	0	325.5257568359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ADVLLM(Oxidation (M))LLA_	REV__nc|ENSG00000124243|Q8TDM0-2|BCAS4;REV__nc|ENSG00000124243|Q8TDM0-3|BCAS4;REV__nc|ENSG00000124243|Q8TDM0|BCAS4	20.94693142431847	0.3660861156085067	1				NaN	NaN	0	NaN	650	2764	3415
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3417	15.584	NaN	1671.8	30	0	456.22	0.106	+			46895	VIQGQAVRK	9	47	499.8089599609375	NaN	0	499.8089599609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VIQGQAVRK_	ENSG00000099812|ENST00000215582|MISP	58.22992032128504	0.15686832049467786	1				NaN	NaN	0	NaN	651	2764	3415
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3418	15.586	NaN	2841	30	0	654.59	0.106				-1	NCRFCQCQ	8	30	586.7261328495412	NaN	0	586.7255859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	3 Carbamidomethyl (C)	_NC(Carbamidomethyl (C))RFC(Carbamidomethyl (C))QC(Carbamidomethyl (C))Q_	CRIM1|p.R358Q|1|0.05|ENSG00000150938|chr2:36476970-36476970|G/A|missense_variant	19.359975847455235	1.7418937515398478	1				NaN	NaN	0	NaN	652	2764	3415
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3419	15.588	NaN	2530.4	30	0	1135.9	0.106	+			14503	GTCQDCKVQG	10	32	519.7216186523438	NaN	0	519.7216186523438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTCQDCKVQG_	ENSG00000077254|ENST00000370794|USP33;ENST00000528150.1_1_1:78206598-78225465:-|nuORF;nc|ENSG00000077254|Q8TEY7-3|USP33;nc|ENSG00000077254|Q8TEY7|USP33;USP33|p.I935Lfs*3|1|0.1|ENSG00000077254|chr1:77697343-77697343|T/-|frameshift_variant	17.468008924990375	0.4201028297492154	1				NaN	NaN	0	NaN	653	2764	3415
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3420	15.59	NaN	2038.3	30	0	440.34	0.106			+	38612	SSGQLRQLL	9	35	334.5296936035156	NaN	0	334.5296936035156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSGQLRQLL_	REV__ENSG00000275074|ENST00000611621|NUDT18;REV__nc|ENSG00000275074|Q6ZVK8-2|NUDT18	26.69291269510374	0.34280015626154364	1				NaN	NaN	0	NaN	654	2764	3415
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3421	15.592	NaN	2161.6	30	0	520.36	0.036			+	27063	MAEILLFDF	9	21	549.780517578125	NaN	0	549.780517578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MAEILLFDF_	REV__ENSG00000134882|ENST00000403766|UBAC2	7.193352174278301	0.40727630907727536	1				NaN	NaN	0	NaN	655	2764	3415
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3427	15.608	NaN	2654.7	30	0	601.04	0.214	+			39817	STLGSQGQTGK	11	57	532.2727950410459	1062.5310371488918	2	532.2730712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STLGSQGQTGK_	ENSG00000124641|ENST00000265350|MED20;nc|ENSG00000288721|Q9H944-2|MED20	70.39856735676683	0.2324169829117963	1				NaN	NaN	0	NaN	658	2767	3426
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3428	15.612	NaN	1221.8	30	0	182.64	0.035			+	17586	IEDRLTKK	8	44	501.8009512447252	1001.5873495562504	2	501.8009948730469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IEDRLTKK_	REV__ENSG00000116984|ENST00000366577|MTR;REV__MTR|p.D198*|1|0.22|ENSG00000116984|chr1:236812821-236812822|-/T|frameshift_variant;REV__MTR|p.F598Sfs*14|1|0.12|ENSG00000116984|chr1:236852615-236852615|T/-|frameshift_variant;REV__MTR|p.G1106Wfs*10|1|0.49|ENSG00000116984|chr1:236894464-236894465|-/T|frameshift_variant;REV__MTR|p.R518Gfs*7|1|0.16|ENSG00000116984|chr1:236850378-236850378|C/-|frameshift_variant;REV__MTR|p.T834Nfs*6|1|0.29|ENSG00000116984|chr1:236874751-236874752|-/A|frameshift_variant;REV__nc|ENSG00000116984|Q99707-2|MTR	60.97194046774394	0.49215940876911696	1				NaN	NaN	0	NaN	659	2767	3426
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3434	15.628	NaN	4052.7	30	0	2783.8	0.214	+			14100	GSLGIAGPPG	10	27	413.2268460014294	824.4391390696588	2	413.2266845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSLGIAGPPG_	COL1A2|p.P896S|1|0.27|ENSG00000164692|chr7:94425129-94425129|C/T|missense_variant	30.503639358989545	0.6307262373768582	1				NaN	NaN	0	NaN	662	2770	3433
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3435	15.632	NaN	2814.6	30	0	353.89	0.106	+			40087	STNSHPILRK	10	44	576.8278133062535	1151.6410736793068	2	576.827880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STNSHPILRK_	ENSG00000138081|ENST00000403359|FBXO11;nc|ENSG00000138081|Q86XK2-5|FBXO11;nc|ENSG00000138081|Q86XK2-6|FBXO11	54.343338949951054	0.4172868656359992	1				NaN	NaN	0	NaN	663	2770	3433
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3436	15.634	NaN	2346.8	30	0	309.26	0.106			+	21045	KKKRESMTD	9	59	569.7962463040244	NaN	0	569.7962036132812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_KKKRESM(Oxidation (M))TD_	REV__tr|U7SFS1|U7SFS1_FUSNUCytokininriboside5'-monophosphatephosphoribohydrolaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02213PE=3SV=1	82.30502934623384	0.06348534290027165	1				NaN	NaN	0	NaN	664	2770	3433
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3437	15.635	NaN	1249.9	30	0	265.41	0.106	+			4007	ATCGMGMKK	9	46	492.22710900126924	NaN	0	492.2267761230469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_ATC(Carbamidomethyl (C))GMGMKK_	ENSG00000262655|ENST00000576479|SPON1	62.107414245175825	0.1403307765918332	1				NaN	NaN	0	NaN	665	2770	3433
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3438	15.637	NaN	1773	30	0	169.08	0.035				-1	VAMYSTALL	9	33	328.8413139049344	NaN	0	328.8414306640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_VAM(Oxidation (M))YSTALL_	ENSG00000164849|ENST00000444847|GPR146	29.14955571784316	0.3303970763161698	1				NaN	NaN	0	NaN	666	2770	3433
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3443	15.652	NaN	1960	30	0	256.17	0.145	+			40703	SVCEGKGLHR	10	52	571.7897865317406	1141.565020130281	2	572.2911376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SVC(Carbamidomethyl (C))EGKGLHR_	ENSG00000161011|ENST00000389805|SQSTM1;ENST00000466342.1_1_5:179250916-179260288:+|nuORF;nc|ENSG00000161011|Q13501-2|SQSTM1	68.84614121027924	0.2867470276772903	1				NaN	NaN	0	NaN	668	2773	3442
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3450	15.671	NaN	16680	30	0	8750.5	0.214			+	22648	KTYASTKLG	9	53	323.51839376353735	967.5333518908121	3	323.5184631347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTYASTKLG_	REV__CEP164|p.A247Gfs*5|1|0.23|ENSG00000110274|chr11:117363476-117363477|-/G|frameshift_variant;REV__CEP164|p.P334Hfs*5|1|0.04|ENSG00000110274|chr11:117371314-117371315|-/A|frameshift_variant;REV__ENSG00000110274|ENST00000278935|CEP164;REV__nc|ENSG00000110274|Q9UPV0-2|CEP164	25.57405402267927	0.5642445186134241	1				NaN	NaN	0	NaN	672	2776	3449
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3451	15.674	NaN	1600.5	30	0	368.36	0.106			+	12258	GATVSGPPL	9	36	399.72132858205595	797.4281042309119	2	399.7213439941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GATVSGPPL_	REV__ENST00000588922.5_1_19:9929234-9929667:-|nuORF	40.5726180659479	0.4135428067754104	1				NaN	NaN	0	NaN	673	2776	3449
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3452	15.676	NaN	2402.9	30	0	564.76	0.106			+	42711	TDEEKHVSM	9	39	359.1627214199899	1074.4663348601698	3	359.16290283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TDEEKHVSM_	REV__ENSG00000108773|ENST00000225916|KAT2A	24.20275056022122	0.577060078256802	1				NaN	NaN	0	NaN	674	2776	3449
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3453	15.678	NaN	3693.9	30	0	1417.7	0.035				-1	QPFNRAML	8	26	496.7531939605189	991.4918349878378	2	496.75396728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_QPFNRAM(Oxidation (M))L_	B4GALT5|p.V216I|1|0.09|ENSG00000158470|chr20:49640626-49640626|C/T|missense_variant;ENSG00000118276|ENST00000306851|B4GALT6;ENSG00000158470|ENST00000371711|B4GALT5;ENST00000578114.1_1_18:29206329-29238028:-|nuORF;nc|ENSG00000118276|Q9UBX8-2|B4GALT6	20.481830146152948	0.8005983782650069	1				NaN	NaN	0	NaN	675	2776	3449
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3458	15.693	NaN	3222.7	30	0	555.11	0.214	+			34547	RVLDVTKKK	9	46	543.8529008981512	1085.6912488631024	2	543.8533935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVLDVTKKK_	ENSG00000164039|ENST00000296424|BDH2;ENST00000492366.5_1_4:104007535-104017411:-|nuORF;ENST00000513518.1_1_4:104013755-104017411:-|nuORF;nc|ENSG00000164039|Q9BUT1-2|BDH2	61.76455937419982	0.19890525308472518	1				NaN	NaN	0	NaN	677	2779	3457
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3459	15.697	NaN	1433	30	0	238.54	0.106			+	12057	GAAEKAKK	8	38	401.74258180964733	801.4706106860947	2	401.7425842285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GAAEKAKK_	REV__ENSG00000149503|ENST00000394818|INCENP;REV__INCENP|p.A786V|1|0.43|ENSG00000149503|chr11:62148812-62148812|C/T|missense_variant;REV__nc|ENSG00000149503|Q9NQS7-2|INCENP	40.5726180659479	0.6527593143185008	1				NaN	NaN	0	NaN	678	2779	3457
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3460	15.699	NaN	2872.2	30	0	948.11	0.106			+	50279	WRRAHCTC	8	47	516.7325880655997	1031.4506231979992	2	517.316162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_WRRAHCTC_	REV__ENSG00000244486|ENST00000622235|SCARF2;REV__nc|ENSG00000244486|Q96GP6|SCARF2	25.450171626174864	0.7628259754767981	1				NaN	NaN	0	NaN	679	2779	3457
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3461	15.7	NaN	557.21	30	0	84.897	0.034			+	-1	IACTIVVF	8	22	461.755078465585	921.49560399797	2	461.7545471191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_IAC(Carbamidomethyl (C))TIVVF_	REV__ENSG00000091106|ENST00000402280|NLRC4;REV__NLRC4|p.F931Lfs*6|1|0.34|ENSG00000091106|chr2:32224755-32224755|A/-|frameshift_variant;REV__NLRC4|p.L964Rfs*6|1|0.05|ENSG00000091106|chr2:32224657-32224658|-/ATAAAGTGTACTC|frameshift_variant;REV__NLRC4|p.N539Tfs*8|1|0.29|ENSG00000091106|chr2:32250248-32250248|T/-|frameshift_variant	14.664097394203935	0.7913966407026132	1				NaN	NaN	0	NaN	680	2779	3457
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3466	15.715	NaN	27894	30	0	8499.2	0.214	+			6349	AVTRTTPVK	9	55	324.8658835336403	971.5758212011208	3	324.8659362792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVTRTTPVK_	ENST00000395472.2_1_14:55494079-55509730:+|nuORF;ENST00000553735.1_1_14:55494079-55498700:+|nuORF;ENST00000555846.1_1_14:55494079-55498626:+|nuORF	49.44154591367651	0.3095138337212152	1				NaN	NaN	0	NaN	682	2782	3465
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3467	15.719	NaN	2127.5	30	0	764.15	0.106	+			33782	RQAVCGHLL	9	28	498.77466888825023	995.5347848433005	2	498.774658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RQAVCGHLL_	ENST00000431561.7_1_16:3283645-3284759:-|nuORF	18.262085536374414	0.6112419832031293	1				NaN	NaN	0	NaN	683	2782	3465
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3468	15.721	NaN	859.93	30	0	109.06	0.106			+	49085	VVKYSSSK	8	37	449.25531005859375	NaN	0	449.25531005859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVKYSSSK_	REV__ENSG00000170921|ENST00000689528|TANC2;REV__nc|ENSG00000170921|Q9HCD6-2|TANC2;REV__nc|ENSG00000170921|Q9HCD6-3|TANC2;REV__nc|ENSG00000170921|Q9HCD6-4|TANC2;REV__nc|ENSG00000170921|Q9HCD6|TANC2;REV__TANC2|p.P1519Lfs*33|3|0.27|ENSG00000170921|chr17:63420533-63420533|C/-|frameshift_variant	26.69291269510374	1.7418937515398478	1				NaN	NaN	0	NaN	684	2782	3465
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3469	15.723	NaN	1921.3	30	0	456.79	0.038	+			36967	SIMEKKMKTK	10	52	612.3456979275708	1222.6768429219414	2	612.3458862304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SIMEKKMKTK_	ENSG00000115267|ENST00000649979|IFIH1	44.639436926238396	0.506394993251866	1				NaN	NaN	0	NaN	685	2782	3465
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3476	15.739	NaN	1944.1	30	0	163.66	0.214	+			46305	VEKETQEKM	9	56	561.2782095290074	1120.5418661248148	2	561.2785034179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VEKETQEKM_	ENSG00000136888|ENST00000374050|ATP6V1G1	63.53385203322761	0.18415635464017938	1				NaN	NaN	0	NaN	689	2785	3475
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3477	15.743	NaN	1506.2	30	0	262.63	0.106	+			11311	FKVNKSKQK	9	38	553.8373413085938	NaN	0	553.8373413085938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FKVNKSKQK_	ENSG00000163535|ENST00000357799|SGO2;nc|ENSG00000163535|Q562F6-2|SGO2	29.550750289552195	0.3283715283222214	1				NaN	NaN	0	NaN	690	2785	3475
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3478	15.745	NaN	540.61	30	0	81.714	0.032	+			402	AASSSSHL	8	27	380.1846604157202	NaN	0	380.18475341796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AASSSSHL_	C1QA|p.D220Tfs*62|1|0.17|ENSG00000173372|chr1:22639322-22639322|A/-|frameshift_variant;C1QA|p.L91Sfs*191|1|0.52|ENSG00000173372|chr1:22638936-22638936|C/-|frameshift_variant	28.2542754592877	1.7418937515398478	1				NaN	NaN	0	NaN	691	2785	3475
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3486	15.764	NaN	3583.7	30	0	449.88	0.215	+			41808	SVSSDRIQK	9	60	510.2777042228349	1018.5408555124699	2	510.2772521972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSSDRIQK_	ENSG00000146278|ENST00000336032|PNRC1;nc|ENSG00000146278|Q12796-2|PNRC1;PNRC1|p.K251Sfs*14|2|0.25|ENSG00000146278|chr6:89083958-89083958|A/-|frameshift_variant	109.47833844074708	0.029530294723441826	1				NaN	NaN	0	NaN	696	2788	3485
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3487	15.767	NaN	1454.4	30	0	211.47	0.106	+			45118	TVKDFSHAK	9	45	516.7771436674838	1031.5397344017674	2	516.7762451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVKDFSHAK_	ENSG00000164941|ENST00000523731|INTS8;ENST00000523206.5_1_8:95850795-95884149:+|nuORF;ENST00000523321.5_1_8:95835614-95871872:+|nuORF;nc|ENSG00000164941|Q75QN2-2|INTS8	51.19269402634007	0.2889735674168909	1				NaN	NaN	0	NaN	697	2788	3485
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3488	15.769	NaN	719.85	30	0	125.98	0.035				-1	ATVPMSKKK	9	36	503.2917276799552	NaN	0	503.2917175292969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_ATVPM(Oxidation (M))SKKK_	ENSG00000100023|ENST00000398831|PPIL2;ENST00000462188.1_1_22:22049506-22049776:+|nuORF	20.94693142431847	0.3660861156085067	1				NaN	NaN	0	NaN	698	2788	3485
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3493	15.784	NaN	1880.7	30	0	476.21	0.214				-1	 	0	46	495.3213741394017	494.3140976728017	1	495.3209533691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	700	2791	3492
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3494	15.788	NaN	3023.3	30	0	685.6	0.106	+			13237	GILAAFLTQK	10	61	531.3197677899061	NaN	0	531.319580078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GILAAFLTQK_	ENSG00000102595|ENST00000376747|UGGT2;UGGT2|p.N1268Ifs*10|1|0.3|ENSG00000102595|chr13:95859613-95859613|T/-|frameshift_variant	26.69291269510374	0.4125295221340092	1				NaN	NaN	0	NaN	701	2791	3492
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3495	15.79	NaN	1720.9	30	0	396.71	0.106			+	49084	VVKVDYGKK	9	48	518.3134058834631	1034.6122588337262	2	518.31396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVKVDYGKK_	REV__tr|U7ST57|U7ST57_FUSNUCoenzymeAbiosynthesisbifunctionalproteinCoaBCOS=FusobacteriumnucleatumCTI-5OX=1316586GN=coaBCPE=3SV=1	34.172542307311794	0.4838870758800184	1				NaN	NaN	0	NaN	702	2791	3492
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3496	15.792	NaN	2043.6	30	0	243.96	0.106	+			4978	ATQVVVEKK	9	58	501.30292572521	1000.59129851722	2	501.3034973144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATQVVVEKK_	ENSG00000204394|ENST00000375663|VARS1;nc|ENSG00000204394|P26640-2|VARS1;VARS|p.A620Pfs*25|1|0.23|ENSG00000204394|chr6:31782750-31782750|C/-|frameshift_variant;VARS|p.L801Wfs*10|1|0.3|ENSG00000204394|chr6:31781707-31781707|A/-|frameshift_variant	96.0336014099291	0.047854655524928534	1				NaN	NaN	0	NaN	703	2791	3492
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3497	15.793	NaN	1629.4	30	0	254.56	0.106	+			30304	PTMLAIQIAI	10	46	535.8189023546876	NaN	0	535.818359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PTMLAIQIAI_	ERCC4|p.T227I|1|0.35|ENSG00000175595|chr16:13928123-13928123|C/T|missense_variant	35.61828744233558	0.3832230071539346	1				NaN	NaN	0	NaN	704	2791	3492
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3498	15.795	NaN	1725.3	30	0	378.17	0.106				-1	KAWCVIPKQ	9	26	565.3138427734375	NaN	0	565.3138427734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_KAWC(Carbamidomethyl (C))VIPKQ_	ENSG00000139132|ENST00000534526|FGD4;ENST00000493087.5_1_12:32755237-32793464:+|nuORF;FGD4|p.Q681Rfs*31|1|0.19|ENSG00000139132|chr12:32638788-32638788|C/-|frameshift_variant;nc|ENSG00000139132|Q96M96|FGD4	11.511019455917149	0.3980220838287494	1				NaN	NaN	0	NaN	705	2791	3492
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3499	15.797	NaN	1575.3	30	0	265.84	0.04				-1	MPRYDASNENK	11	25	670.8004760742188	NaN	0	670.8004760742188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_M(Oxidation (M))PRYDASNENK_	ENSG00000099139|ENST00000674117|PCSK5;nc|ENSG00000099139|Q92824-2|PCSK5;nc|ENSG00000099139|Q92824|PCSK5	11.635926663890343	0.456735970842152	1				NaN	NaN	0	NaN	706	2791	3492
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3506	15.815	NaN	1744.7	30	0	604.3	0.214			+	9300	EHTSSLDVR	9	36	522.2572021484375	NaN	0	522.2572021484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EHTSSLDVR_	REV__ENSG00000101194|ENST00000370351|SLC17A9;REV__ENST00000488738.5_1_20:61598615-61598849:+|nuORF;REV__nc|ENSG00000101194|Q9BYT1-2|SLC17A9	29.14955571784316	0.3303970763161698	1				NaN	NaN	0	NaN	710	2794	3505
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3507	15.819	NaN	4241.5	30	0	614.75	0.106	+			6554	AYKKTHETL	9	63	545.7981876331512	1089.5818223331023	2	545.798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AYKKTHETL_	ENSG00000111907|ENST00000534000|TPD52L1;ENST00000392483.6_1_6:125475019-125569560:+|nuORF;ENST00000532978.5_1_6:125475518-125573183:+|nuORF;nc|ENSG00000111907|Q16890-2|TPD52L1;nc|ENSG00000111907|Q16890-3|TPD52L1;nc|ENSG00000111907|Q16890-4|TPD52L1;nc|ENSG00000111907|Q16890-5|TPD52L1	93.1432384553994	0.056003526918089595	1				NaN	NaN	0	NaN	711	2794	3505
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3508	15.821	NaN	1771.7	30	0	251.08	0.106				-1	KQGMKNASALT	11	49	582.804934872544	NaN	0	582.8049926757812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_KQGM(Oxidation (M))KNASALT_	ENSG00000152672|ENST00000272367|CLEC4F;nc|ENSG00000152672|Q8N1N0-2|CLEC4F	29.170058357718403	0.43541742044178583	1				NaN	NaN	0	NaN	712	2794	3505
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3509	15.823	NaN	1286.5	30	0	255.48	0.106	+			20313	KEQEQAQKL	9	57	551.299483211696	NaN	0	551.2996215820312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEQEQAQKL_	ENSG00000136021|ENST00000360820|SCYL2	85.86182877749512	0.05129763505578642	1				NaN	NaN	0	NaN	713	2794	3505
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3510	15.825	NaN	1287.5	30	0	312.62	0.036			+	-1	ICCRCFRQ	8	22	543.243896484375	NaN	0	543.243896484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_IC(Carbamidomethyl (C))CRCFRQ_	REV__ENSG00000108306|ENST00000264658|FBXL20;REV__nc|ENSG00000108306|Q96IG2-2|FBXL20	12.959181472943097	1.7418937515398478	1				NaN	NaN	0	NaN	714	2794	3505
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3515	15.84	NaN	2086.8	30	0	319.36	0.214	+			31725	QNYLRRGRE	9	64	596.3189705129162	NaN	0	596.3190307617188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QNYLRRGRE_	EDEM1|p.S398I|1|0.43|ENSG00000134109|chr3:5205217-5205217|G/T|missense_variant;ENSG00000134109|ENST00000256497|EDEM1;nc|ENSG00000134109|Q92611-2|EDEM1	45.97224482568171	0.23445038899310136	1				NaN	NaN	0	NaN	716	2797	3514
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3516	15.844	NaN	1258	30	0	368.4	0.036	+			45338	TVSKILHHK	9	47	531.8229582100727	1061.6313634869452	2	531.8246459960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVSKILHHK_	CFTR|p.E1044Dfs*20|1|0.04|ENSG00000001626|chr7:117610661-117610662|-/TCAAAGAAAAC|frameshift_variant;CFTR|p.G1208Afs*3|1|0.3|ENSG00000001626|chr7:117627672-117627672|G/-|frameshift_variant;CFTR|p.L1258Ffs*7|1|0.26|ENSG00000001626|chr7:117642487-117642488|-/T|frameshift_variant;CFTR|p.S1297Lfs*31|1|0.28|ENSG00000001626|chr7:117652852-117652852|T/-|frameshift_variant;ENSG00000001626|ENST00000003084|CFTR;nc|ENSG00000001626|P13569-2|CFTR	47.657333605630114	0.33044192980041115	1				NaN	NaN	0	NaN	717	2797	3514
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3523	15.863	NaN	3921.2	30	0	1363.1	0.214	+			14470	GTCGKAFSR	9	54	492.23961849411586	982.4646840550317	2	492.2393798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GTC(Carbamidomethyl (C))GKAFSR_	ENSG00000124216|ENST00000244050|SNAI1	72.2432373244024	0.13108886737667413	1				NaN	NaN	0	NaN	721	2800	3522
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3524	15.867	NaN	3242.6	30	0	463.73	0.039	+			22928	KVQDVKKTIQK	11	65	657.9084685928052	1313.8023842524103	2	657.9088745117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVQDVKKTIQK_	ENSG00000133706|ENST00000394434|LARS1;ENST00000508667.5_1_5:145522961-145531505:-|nuORF;nc|ENSG00000133706|Q9P2J5-2|LARS1	144.55000592163006	0.00014742827238178115	1				NaN	NaN	0	NaN	722	2800	3522
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3531	15.884	NaN	1936.9	30	0	362.82	0.144	+			5824	AVIGKGGKNIK	11	53	542.8456762592781	NaN	0	542.8452758789062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVIGKGGKNIK_	ENSG00000165119|ENST00000376263|HNRNPK;ENST00000483135.1_1_9:86591819-86593167:-|nuORF;ENST00000485383.1_1_3:96068520-96068997:+|nuORF;nc|ENSG00000165119|P61978-3|HNRNPK;nc|ENSG00000165119|P61978|HNRNPK	47.227680397652996	0.33523056580093125	1				NaN	NaN	0	NaN	726	2803	3530
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3537	15.903	NaN	1579.1	30	0	218.15	0.213	+			21563	KPCIKYTGHY	10	44	605.3056758433949	1208.5967987535896	2	605.80712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KPCIKYTGHY_	ENSG00000169490|ENST00000456397|TM2D2;nc|ENSG00000169490|Q9BX73-2|TM2D2	37.50817390946774	0.5721060100277453	1				NaN	NaN	0	NaN	729	2806	3536
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3538	15.907	NaN	2711	30	0	217.48	0.035	+			39319	STAVATDVKK	10	59	510.29012902978974	1018.5657051263795	2	510.2898864746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STAVATDVKK_	ENSG00000128298|ENST00000381669|BAIAP2L2;nc|ENSG00000128298|Q6UXY1-2|BAIAP2L2	91.26522074875469	0.12383023862516404	1				NaN	NaN	0	NaN	730	2806	3536
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3543	15.923	NaN	747.56	30	0	94.742	0.142			+	-1	LCAGALCLK	9	36	474.7517722343618	947.4889915355236	2	474.7500305175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_LC(Carbamidomethyl (C))AGALCLK_	REV__ENST00000598273.5_1_19:48283675-48283816:+|nuORF	35.200714571348534	0.47427825964483533	1				NaN	NaN	0	NaN	732	2809	3542
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3547	15.939	NaN	2194.4	30	0	580.37	0.214	+			17997	IIAKVTAKK	9	48	486.33376295046065	970.6529729677213	2	486.33355712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IIAKVTAKK_	ENSG00000155008|ENST00000373173|APOOL	95.81516180277367	0.04847050768394289	1				NaN	NaN	0	NaN	733	2812	3546
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3548	15.943	NaN	3742.3	30	0	1056.9	0.035	+			25052	LLKKTLQK	8	37	324.55856729409635	970.6538724824891	3	324.5583801269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LLKKTLQK_	ENSG00000127483|ENST00000438032|HP1BP3;MAST2-HP1BP3|1|fusion;nc|ENSG00000127483|Q5SSJ5-2|HP1BP3;nc|ENSG00000127483|Q5SSJ5-3|HP1BP3	28.2542754592877	0.7411748056684583	1				NaN	NaN	0	NaN	734	2812	3546
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3554	15.96	NaN	1724	30	0	177.37	0.211				-1	KAHQMCFRDY	10	50	686.3011474609375	NaN	0	686.3011474609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_KAHQM(Oxidation (M))C(Carbamidomethyl (C))FRDY_	ENSG00000065325|ENST00000262441|GLP2R	24.519189625965996	0.41966695327750003	1				NaN	NaN	0	NaN	737	2815	3553
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3555	15.963	NaN	1325.5	30	0	279.34	0.035	+			19642	KDKLWVTV	8	47	494.7928115624968	987.5710701917936	2	494.7926940917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KDKLWVTV_	tr|U7SU24|U7SU24_FUSNUAlanine--tRNAligaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=alaSPE=3SV=1	36.446750945000026	0.6783611724927969	1				NaN	NaN	0	NaN	738	2815	3553
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3563	15.984	NaN	4757.4	30	0	910.99	0.214	+			48869	VVDAKTLKK	9	62	501.3210149662167	1000.6274769992334	2	501.3207702636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVDAKTLKK_	ENSG00000079246|ENST00000392132|XRCC5;ENST00000493706.1_1_2:216990646-216992426:+|nuORF;XRCC5|p.E287Kfs*11|2|0.25|ENSG00000079246|chr2:216127589-216127589|A/-|frameshift_variant;XRCC5|p.Q488Rfs*29|1|0.06|ENSG00000079246|chr2:216141305-216141305|C/-|frameshift_variant	98.58198989935565	0.04066992115528678	1				NaN	NaN	0	NaN	743	2818	3562
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3564	15.988	NaN	1433.6	30	0	981.55	0.106			+	42527	TAQQPALP	8	21	413.2268460014294	824.4391390696588	2	413.2268371582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAQQPALP_	REV__ENSG00000153443|ENST00000283474|UBALD1;REV__nc|ENSG00000153443|Q8TB05-2|UBALD1	25.450171626174864	0.7628259754767981	1				NaN	NaN	0	NaN	744	2818	3562
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3565	15.99	NaN	1560.6	30	0	235.17	0.035			+	20583	KFVTEPDVA	9	51	503.2668346601752	1004.5191163871505	2	503.2663879394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KFVTEPDVA_	REV__ENSG00000228836|ENST00000698999|CT45A5;REV__ENSG00000268940|ENST00000594565|CT45A1;REV__ENSG00000269096|ENST00000598716|CT45A3;REV__ENSG00000269586|ENST00000682849|CT45A10;REV__ENSG00000270946|ENST00000620704|CT45A9;REV__ENSG00000271449|ENST00000612907|CT45A2;REV__ENSG00000273696|ENST00000610598|CT45A7;REV__ENSG00000278085|ENST00000611660|CT45A8;REV__ENSG00000278289|ENST00000620654|CT45A6	42.396135135203025	0.392153681582562	1				NaN	NaN	0	NaN	745	2818	3562
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3573	16.008	NaN	14324	30	0	9742	0.214	+			22946	KVQSKVNLK	9	58	348.5569569003053	1042.6490413011159	3	348.55706787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVQSKVNLK_	DYNC1H1|p.F2635Lfs*67|1|0.16|ENSG00000197102|chr14:102017141-102017141|T/-|frameshift_variant;DYNC1H1|p.G1902Vfs*27|2|0.27|ENSG00000197102|chr14:102006154-102006154|G/-|frameshift_variant;DYNC1H1|p.K3112Hfs*3|1|0.31|ENSG00000197102|chr14:102027998-102027999|-/TCACAAG|frameshift_variant;DYNC1H1|p.W4201Gfs*43|1|0.42|ENSG00000197102|chr14:102043958-102043958|G/-|frameshift_variant;ENSG00000197102|ENST00000360184|DYNC1H1	49.44154591367651	0.3095138337212152	1				NaN	NaN	0	NaN	750	2821	3572
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3574	16.011	NaN	5344	30	0	3000	0.106	+			30875	QEKEEQHQL	9	51	584.7835186910663	1167.5524844489325	2	584.7835083007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QEKEEQHQL_	ENSG00000107581|ENST00000369144|EIF3A;nc|ENSG00000107581|Q14152-2|EIF3A	45.02220120713402	0.3613509778819777	1				NaN	NaN	0	NaN	751	2821	3572
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3575	16.013	NaN	2535.4	30	0	764.01	0.106	+			12406	GEAKCHKS	8	38	430.20879008498235	858.4030272367647	2	430.2088928222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEAKCHKS_	ENSG00000110066|ENST00000304363|KMT5B;ENST00000441488.6_1_11:67925157-67938746:-|nuORF	35.61828744233558	0.6843154725607303	1				NaN	NaN	0	NaN	752	2821	3572
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3576	16.015	NaN	2078	30	0	412.19	0.106	+			39629	STIDPSGTRSK	11	45	574.7986542268242	1147.5827555204482	2	574.7992553710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STIDPSGTRSK_	ENSG00000121931|ENST00000369763|LRIF1	73.84112541714126	0.20371746787051248	1				NaN	NaN	0	NaN	753	2821	3572
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3577	16.017	NaN	3686.2	30	0	813.35	0.106	+			14160	GSNGTIIRK	9	53	473.27728535299434	944.5400177727887	2	473.27734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GSNGTIIRK_	ENSG00000117983|ENST00000529681|MUC5B;MUC5B|p.A1645Gfs*130|1|0.48|ENSG00000117983|chr11:1241806-1241807|-/C|frameshift_variant;MUC5B|p.E2447Vfs*233|1|0.15|ENSG00000117983|chr11:1244218-1244219|TG/-|frameshift_variant;MUC5B|p.E2929Gfs*98|1|0.13|ENSG00000117983|chr11:1245660-1245661|-/GC|frameshift_variant;MUC5B|p.P2717Qfs*3|2|0.21|ENSG00000117983|chr11:1245025-1245025|C/-|frameshift_variant;MUC5B|p.P3417Qfs*3|1|0.41|ENSG00000117983|chr11:1247125-1247125|C/-|frameshift_variant;MUC5B|p.S2205Qfs*54|1|0.2|ENSG00000117983|chr11:1243486-1243487|-/C|frameshift_variant;MUC5B|p.S3126Pfs*13|1|0.37|ENSG00000117983|chr11:1246251-1246251|C/-|frameshift_variant;MUC5B|p.S3878Pfs*27|1|0.13|ENSG00000117983|chr11:1248507-1248507|C/-|frameshift_variant;MUC5B|p.S4017Lfs*56|1|0.22|ENSG00000117983|chr11:1248928-1248929|-/C|frameshift_variant;MUC5B|p.T4706Pfs*4|2|0.37|ENSG00000117983|chr11:1250996-1250996|A/-|frameshift_variant	70.8162118820467	0.13725933411854815	1				NaN	NaN	0	NaN	754	2821	3572
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3578	16.019	NaN	2484.5	30	0	374.23	0.106	+			45998	VAVATPAKK	9	47	442.7815924403079	883.5486319474159	2	442.7815856933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VAVATPAKK_	ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232323706-232327997:-|nuORF	49.44154591367651	0.3095138337212152	1				NaN	NaN	0	NaN	755	2821	3572
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3579	16.021	NaN	1171.7	30	0	156.85	0.035			+	46828	VIDVLPEKM	9	37	522.2958479529261	NaN	0	522.2957153320312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VIDVLPEKM_	REV__ENSG00000111218|ENST00000382622|PRMT8;REV__nc|ENSG00000111218|Q9NR22-2|PRMT8	36.446750945000026	0.29355505452396785	1				NaN	NaN	0	NaN	756	2821	3572
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3590	16.044	NaN	1124.8	30	0	186.1	0.143	+			13752	GQDPDSPQH	9	35	490.70698359710855	979.3994142610171	2	490.70703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GQDPDSPQH_	ENSG00000178719|ENST00000395068|GRINA	23.52269567125451	0.5834155526130771	1				NaN	NaN	0	NaN	764	2824	3589
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3595	16.061	NaN	3944.4	30	0	464.8	0.214	+			41072	SVIKTQETK	9	62	517.2982433290446	1032.581933724889	2	517.2985229492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVIKTQETK_	ENSG00000120690|ENST00000239882|ELF1;nc|ENSG00000120690|P32519-2|ELF1	163.1509380574825	0.003936019289634439	1				NaN	NaN	0	NaN	766	2827	3594
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3596	16.065	NaN	1807.7	30	0	173.54	0.106	+			21708	KQIKTLNNK	9	54	543.8349596776628	1085.6553664221256	2	543.8355102539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KQIKTLNNK_	ENST00000430398.2_1_1:73570714-73571443:+|nuORF;ENST00000562022.1_1_15:43093683-43094592:-|nuORF	54.776311868738084	0.25715957988447635	1				NaN	NaN	0	NaN	767	2827	3594
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3597	16.067	NaN	1221.8	30	0	372.72	0.033	+			4121	ATEGGVLKK	9	39	451.76870810243315	NaN	0	451.7685852050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATEGGVLKK_	ENSG00000041982|ENST00000350763|TNC;nc|ENSG00000041982|P24821-2|TNC;nc|ENSG00000041982|P24821-3|TNC;nc|ENSG00000041982|P24821-4|TNC;nc|ENSG00000041982|P24821-5|TNC;nc|ENSG00000041982|P24821-6|TNC;TNC|p.V28D|1|0.49|ENSG00000041982|chr9:115090936-115090936|A/T|missense_variant	68.78682469695295	0.1118430353446351	1				NaN	NaN	0	NaN	768	2827	3594
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3603	16.083	NaN	4010.6	30	0	525.69	0.214			+	-1	KQMENIHSAV	10	69	586.7883809134161	NaN	0	586.7886352539062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_KQM(Oxidation (M))ENIHSAV_	REV__ENSG00000146426|ENST00000682666|TIAM2;REV__ENSG00000156299|ENST00000541036|TIAM1;REV__nc|ENSG00000146426|Q8IVF5-2|TIAM2;REV__nc|ENSG00000146426|Q8IVF5-3|TIAM2;REV__nc|ENSG00000146426|Q8IVF5-4|TIAM2;REV__nc|ENSG00000146426|Q8IVF5-5|TIAM2;REV__nc|ENSG00000156299|Q13009-2|TIAM1	87.69643885390035	0.06257964879869547	1				NaN	NaN	0	NaN	771	2830	3602
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3604	16.087	NaN	2238.7	30	0	258.03	0.035			+	31637	QMNPVFGKK	9	58	524.7821019348796	1047.5496509365591	2	524.7828979492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QMNPVFGKK_	REV__ENSG00000100220|ENST00000216038|RTCB;REV__ENST00000463455.1_1_22:32804140-32808230:-|nuORF;REV__ENST00000487704.5_1_22:32797732-32808215:-|nuORF;REV__RTCB|p.M246Wfs*11|4|0.28|ENSG00000100220|chr22:32398019-32398019|T/-|frameshift_variant	60.11826168202944	0.21262886028301267	1				NaN	NaN	0	NaN	772	2830	3602
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3612	16.107	NaN	7012.6	30	0	1690.3	0.214	+			6444	AVYENAREK	9	67	540.2774933003702	1078.5404336675404	2	540.2784423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVYENAREK_	ENSG00000164941|ENST00000523731|INTS8;ENST00000523321.5_1_8:95835614-95871872:+|nuORF;INTS8|p.F279Lfs*6|1|0.34|ENSG00000164941|chr8:94836602-94836602|T/-|frameshift_variant;nc|ENSG00000164941|Q75QN2-2|INTS8	106.68306549817024	0.032382560583716295	1				NaN	NaN	0	NaN	777	2833	3611
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3613	16.11	NaN	3137.6	30	0	1201.6	0.106				-1	EDDMTPTLLA	10	35	561.25582190657	1120.4970908799398	2	561.2566528320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_EDDM(Oxidation (M))TPTLLA_	ANKS4B|p.G32D|1|0.36|ENSG00000175311|chr16:21233832-21233832|G/A|missense_variant	23.04248740728303	0.69165701907106	1				NaN	NaN	0	NaN	778	2833	3611
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3614	16.112	NaN	3257.5	30	0	435.72	0.039	+			6453	AVYGQKEIHRK	11	68	664.8750241865431	1327.735495439886	2	664.8753051757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVYGQKEIHRK_	ENSG00000145907|ENST00000356245|G3BP1;ENST00000413279.1_1_2:136269117-136269381:-|nuORF;ENST00000519832.1_1_5:151166169-151170647:+|nuORF;nc|ENSG00000145907|Q13283-2|G3BP1	63.69406221917213	0.2904805327065929	1				NaN	NaN	0	NaN	779	2833	3611
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3623	16.133	NaN	5888.8	30	0	1469.7	0.214	+			15596	GVIKAVDKK	9	51	479.30790256783195	956.6012522024639	2	479.30804443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVIKAVDKK_	ENSG00000156508|ENST00000309268|EEF1A1;ENST00000417549.1_1_13:28789725-28790031:+|nuORF;ENST00000419025.1_1_3:183744159-183744318:-|nuORF;ENST00000436459.2_1_9:135895553-135896258:+|nuORF;ENST00000443590.1_1_2:107313789-107313948:-|nuORF;ENST00000513637.1_1_5:43495177-43495438:-|nuORF;ENST00000559385.1_1_15:53229359-53229566:-|nuORF;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	63.53385203322761	0.18415635464017938	1				NaN	NaN	0	NaN	785	2836	3622
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3624	16.136	NaN	2361.3	30	0	304.96	0.106	+			42966	TEKEGKDQEL	10	54	588.7909081735313	1175.5672634138625	2	588.7911987304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEKEGKDQEL_	ENSG00000137497|ENST00000393695|NUMA1;nc|ENSG00000137497|Q14980-2|NUMA1;nc|ENSG00000137497|Q14980-3|NUMA1;nc|ENSG00000137497|Q14980-4|NUMA1;NUMA1|p.A1067S|1|0.25|ENSG00000137497|chr11:72014304-72014304|C/A|missense_variant;NUMA1|p.K1766Rfs*2|1|0.39|ENSG00000137497|chr11:72007357-72007357|G/-|frameshift_variant;NUMA1|p.L1786Pfs*18|1|0.23|ENSG00000137497|chr11:72007295-72007296|-/G|frameshift_variant	58.2462437865262	0.38179041844353556	1				NaN	NaN	0	NaN	786	2836	3622
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3625	16.138	NaN	2176.9	30	0	310.71	0.106	+			33646	RMLLCFAFLW	10	35	650.3432969123529	NaN	0	650.3440551757812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RMLLCFAFLW_	ENSG00000143641|ENST00000366672|GALNT2;ENST00000488903.1_1_1:230203027-230227371:+|nuORF;GALNT2|p.G27Afs*115|1|0.24|ENSG00000143641|chr1:230067355-230067355|G/-|frameshift_variant;GALNT2|p.N516Mfs*16|1|0.24|ENSG00000143641|chr1:230274548-230274548|A/-|frameshift_variant	17.364965105453717	0.4201028297492154	1				NaN	NaN	0	NaN	787	2836	3622
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3626	16.14	NaN	885.7	30	0	216.42	0.035			+	33578	RLKSLELK	8	31	493.821044921875	NaN	0	493.821044921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RLKSLELK_	REV__ENSG00000151575|ENST00000696102|TEX9;REV__nc|ENSG00000151575|Q8N6V9-2|TEX9	16.473147378115264	1.7418937515398478	1				NaN	NaN	0	NaN	788	2836	3622
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3636	16.162	NaN	3552.9	30	0	697.84	0.214	+			2943	ASDPNVSKKLK	11	58	593.8433123410507	1185.6720717489013	2	593.8427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASDPNVSKKLK_	ENSG00000151474|ENST00000357447|FRMD4A	89.35639160576558	0.1014093944095153	1				NaN	NaN	0	NaN	795	2839	3635
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3637	16.166	NaN	2422.2	30	0	568.8	0.106			+	24803	LILNITQDFGK	11	53	421.24313537299514	1260.7075767191855	3	421.2431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LILNITQDFGK_	REV__ENSG00000128534|ENST00000249299|LSM8	26.69291269510374	0.70980431218767	1				NaN	NaN	0	NaN	796	2839	3635
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3638	16.168	NaN	3564.4	30	0	1187.2	0.038	+			14527	GTDRKLSPLLS	11	38	396.23110266439204	1185.6714785933762	3	396.23089599609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTDRKLSPLLS_	ENSG00000160284|ENST00000291672|SPATC1L	35.17822180527639	0.6208003396870814	1				NaN	NaN	0	NaN	797	2839	3635
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3645	16.184	NaN	2575.8	30	0	551.36	0.143	+			6371	AVTYTEHAK	9	59	510.2616696015609	1018.5087862699219	2	510.2614440917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVTYTEHAK_	ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2	45.97224482568171	0.3502073465782774	1				NaN	NaN	0	NaN	801	2842	3644
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3650	16.201	NaN	2989.5	30	0	356.1	0.213	+			22661	KTYIPPKGETK	11	52	631.3608699096767	1260.7071868861533	2	631.3613891601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTYIPPKGETK_	ENSG00000189403|ENST00000341423|HMGB1;ENST00000559968.1_1_14:68082236-68082464:+|nuORF;nc|ENSG00000124097|B2RPK0|HMGB1P1	43.41853373365257	0.5111670701941979	1				NaN	NaN	0	NaN	803	2845	3649
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3651	16.204	NaN	3111.4	30	0	419.63	0.037			+	-1	SPDQHGRCDG	10	48	564.7268067054133	1127.4390604776265	2	564.728271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SPDQHGRC(Carbamidomethyl (C))DG_	REV__ENSG00000124098|ENST00000371384|FAM210B	35.15202426646627	0.5927656479315102	1				NaN	NaN	0	NaN	804	2845	3649
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3657	16.22	NaN	3056.8	30	0	577.36	0.214	+			49875	VYTKKTTKL	9	59	541.3339691366847	1080.6533853401693	2	541.3346557617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYTKKTTKL_	ENSG00000148396|ENST00000684901|SEC16A;nc|ENSG00000148396|O15027-2|SEC16A;nc|ENSG00000148396|O15027-3|SEC16A;nc|ENSG00000148396|O15027-4|SEC16A;nc|ENSG00000148396|O15027-5|SEC16A;SEC16A|p.P2155Hfs*25|1|0.25|ENSG00000148396|chr9:136447664-136447664|G/-|frameshift_variant	43.650786325866115	0.37743712540499297	1				NaN	NaN	0	NaN	807	2848	3656
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3658	16.224	NaN	4262.4	30	0	1415.3	0.037			+	-1	PTGSGGLGCYC	11	43	376.82048306606043	1127.4396197983813	3	376.8207092285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_PTGSGGLGC(Carbamidomethyl (C))YC(Carbamidomethyl (C))_	REV__ENSG00000170890|ENST00000308366|PLA2G1B	24.231819034082204	0.7356191775841856	1				NaN	NaN	0	NaN	808	2848	3656
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3663	16.239	NaN	1592.3	30	0	385.17	0.214	+			19482	KATDSSDPLK	10	52	531.2780194726381	1060.5414860120761	2	531.2785034179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KATDSSDPLK_	ENSG00000072756|ENST00000251607|TRNT1;nc|ENSG00000072756|Q96Q11-2|TRNT1;TRNT1|p.S418Vfs*11|1|0.4|ENSG00000072756|chr3:3148095-3148095|A/-|frameshift_variant	46.45678178249821	0.4896490706773647	1				NaN	NaN	0	NaN	810	2851	3662
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3664	16.242	NaN	1951	30	0	204.16	0.037			+	12488	GEEDLKVTKN	10	62	566.7953315290056	1131.576110124811	2	567.2978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEEDLKVTKN_	REV__tr|U7T3H9|U7T3H9_FUSNUFAD:proteinFMNtransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00668PE=3SV=1	49.536043120802724	0.461275219792494	1				NaN	NaN	0	NaN	811	2851	3662
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3668	16.257	NaN	1859.6	30	0	544.42	0.145			+	-1	GCWAYLSGWG	10	47	578.7465804384797	1155.4786079437592	2	578.746826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GC(Carbamidomethyl (C))WAYLSGWG_	REV__ENSG00000215712|ENST00000400788|TMEM242	31.954861631926434	0.6188749698950511	1				NaN	NaN	0	NaN	812	2854	3667
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3673	16.273	NaN	4503.9	30	0	541.3	0.214	+			4144	ATEQPLTAKK	10	62	543.8110053663335	1085.6074577994668	2	543.81103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATEQPLTAKK_	ENSG00000120725|ENST00000394817|SIL1	96.0336014099291	0.09653029772959643	1				NaN	NaN	0	NaN	814	2857	3672
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3674	16.277	NaN	1832.5	30	0	158.86	0.106			+	-1	PHCLSARDWFI	11	44	701.3409998572773	NaN	0	701.3408203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_PHC(Carbamidomethyl (C))LSARDWFI_	REV__ENST00000324198.10_1_22:26120814-26120889:+|nuORF	32.81241826257853	0.4191849651971536	1				NaN	NaN	0	NaN	815	2857	3672
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3675	16.279	NaN	1123.7	30	0	190.72	0.106	+			5938	AVLKDRVNK	9	39	521.8221435546875	NaN	0	521.8221435546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVLKDRVNK_	CKAP2L|p.T478Pfs*15|1|0.25|ENSG00000169607|chr2:112752437-112752437|T/-|frameshift_variant;CKAP2L|p.T618Lfs*3|1|0.37|ENSG00000169607|chr2:112740978-112740978|T/-|frameshift_variant;ENSG00000169607|ENST00000302450|CKAP2L;nc|ENSG00000169607|Q8IYA6-3|CKAP2L	54.776311868738084	0.17377682019723872	1				NaN	NaN	0	NaN	816	2857	3672
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3676	16.28	NaN	1810.2	30	0	243.83	0.037			+	21924	KRVDKNTIVA	10	49	572.3456833398054	1142.6768137464107	2	572.3467407226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KRVDKNTIVA_	REV__ENSG00000104408|ENST00000220849|EIF3E	38.753607047826485	0.5606299674732264	1				NaN	NaN	0	NaN	817	2857	3672
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3683	16.297	NaN	17718	30	0	3649.8	0.214	+			37021	SIQRKLQEK	9	80	565.337600453748	1128.660647974296	2	565.3383178710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIQRKLQEK_	ENSG00000138640|ENST00000264344|FAM13A;ENST00000508360.5_1_4:89653076-89671014:-|nuORF;ENST00000511573.5_1_4:89649686-89680064:-|nuORF;nc|ENSG00000138640|O94988-1|FAM13A;nc|ENSG00000138640|O94988-3|FAM13A;nc|ENSG00000138640|O94988-5|FAM13A;nc|ENSG00000138640|O94988-6|FAM13A	112.2953585152457	0.026655838328212944	1				NaN	NaN	0	NaN	821	2860	3682
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3684	16.301	NaN	2129.1	30	0	432.24	0.106	+			35858	SEDKKRPSL	9	48	530.293550988877	1058.5725490445539	2	530.2941284179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEDKKRPSL_	ENSG00000140682|ENST00000394863|TGFB1I1;ENST00000564176.5_1_16:31485144-31486093:+|nuORF;ENST00000567066.6_1_16:31483405-31488894:+|nuORF;ENST00000568142.2_1_16:31484766-31486093:+|nuORF;nc|ENSG00000140682|O43294-2|TGFB1I1	60.11826168202944	0.21262886028301267	1				NaN	NaN	0	NaN	822	2860	3682
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3685	16.303	NaN	1299.5	30	0	203.37	0.035				-1	FCSAELLLP	9	42	525.2723349156672	1048.5301168981343	2	525.2731323242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_FC(Carbamidomethyl (C))SAELLLP_	ENST00000379278.3_1_6:13470666-13486268:-|nuORF	23.04248740728303	0.5879033540491928	1				NaN	NaN	0	NaN	823	2860	3682
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3695	16.324	NaN	2536.4	30	0	503.25	0.214	+			46334	VEKKSVAKL	9	51	501.3210112854487	1000.6274696376975	2	501.32080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VEKKSVAKL_	ENSG00000101182|ENST00000370873|PSMA7;ENSG00000154611|ENST00000415576|PSMA8;ENST00000484488.5_1_20:60714188-60718428:-|nuORF;nc|ENSG00000101182|O14818-4|PSMA7;nc|ENSG00000154611|Q8TAA3|PSMA8;PSMA8|p.N213Kfs*3|1|0.21|ENSG00000154611|chr18:26179084-26179085|-/A|frameshift_variant	38.753607047826485	0.4348790777924195	1				NaN	NaN	0	NaN	830	2863	3694
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3696	16.328	NaN	709.02	30	0	226.45	0.106	+			8622	ECYLLAAVA	9	24	476.74288298545815	NaN	0	476.742431640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ECYLLAAVA_	ENSG00000174914|ENST00000642097|OR9G1	12.206847966760668	0.39566704307768535	1				NaN	NaN	0	NaN	831	2863	3694
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3697	16.33	NaN	1661.9	30	0	259.48	0.106	+			337	AAQAHTREL	9	35	498.76515361694516	NaN	0	498.7653503417969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AAQAHTREL_	ENSG00000103549|ENST00000324685|RNF40;ENST00000493683.5_1_16:30773821-30780773:+|nuORF;nc|ENSG00000103549|O75150-3|RNF40;nc|ENSG00000103549|O75150-4|RNF40	29.170058357718403	0.3302935627494407	1				NaN	NaN	0	NaN	832	2863	3694
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3698	16.332	NaN	2443.7	30	0	477.45	0.106	+			40719	SVCGKSFHR	9	55	539.2665222538643	1076.5184915745285	2	539.267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_SVC(Carbamidomethyl (C))GKSFHR_	ENSG00000066422|ENST00000312938|ZBTB11;ZBTB11|p.E974Nfs*14|1|0.1|ENSG00000066422|chr3:101651408-101651408|C/-|frameshift_variant	68.84614121027924	0.14577793175421136	1				NaN	NaN	0	NaN	833	2863	3694
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3699	16.334	NaN	886.99	30	0	149.29	0.036	+			27785	MRRSLVPQ	8	39	348.85744276061155	NaN	0	348.8577575683594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))M(Oxidation (M))RRSLVPQ_	ENSG00000080503|ENST00000349721|SMARCA2;nc|ENSG00000080503|P51531-2|SMARCA2;SMARCA2|p.S820N|1|0.33|ENSG00000080503|chr9:2084129-2084129|G/A|missense_variant	51.33545320467046	1.7418937515398478	1				NaN	NaN	0	NaN	834	2863	3694
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3705	16.35	NaN	3740.9	30	0	512.87	0.214			+	3178	ASITKVPSK	9	57	465.7845286354815	929.554504337763	2	465.7843322753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASITKVPSK_	REV__ENSG00000139350|ENST00000266742|NEDD1;REV__nc|ENSG00000139350|Q8NHV4-2|NEDD1;REV__nc|ENSG00000139350|Q8NHV4-3|NEDD1	63.53385203322761	0.18415635464017938	1				NaN	NaN	0	NaN	837	2866	3704
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3706	16.353	NaN	953.84	30	0	207.69	0.035	+			42340	TAGTHPVGLQ	10	30	490.761254687261	979.507956441322	2	490.76080322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAGTHPVGLQ_	ENST00000484375.5_1_7:98972330-98988614:+|nuORF	37.81151784470057	0.569310847604193	1				NaN	NaN	0	NaN	838	2866	3704
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3711	16.368	NaN	2087.3	30	0	346.8	0.214	+			36661	SGMGSTVSK	9	43	427.2075098774202	852.4004668216404	2	427.20703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SGMGSTVSK_	ENSG00000132383|ENST00000254719|RPA1;RPA1|p.N274Mfs*5|1|0.18|ENSG00000132383|chr17:1879272-1879272|A/-|frameshift_variant	68.84614121027924	0.14577793175421136	1				NaN	NaN	0	NaN	840	2869	3710
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3712	16.372	NaN	2286.1	30	0	278.88	0.035	+			38864	SSNSYAIKK	9	63	499.2691776560944	996.5238023789889	2	499.771728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSNSYAIKK_	ENSG00000083845|ENST00000196551|RPS5;ENST00000599232.1_1_19:58906030-58906114:+|nuORF	72.2432373244024	0.13108886737667413	1				NaN	NaN	0	NaN	841	2869	3710
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3717	16.386	NaN	2179.9	30	0	325.36	0.214	+			41843	SVSTQQPPK	9	44	486.26126310047084	970.5079732677417	2	486.2613220214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSTQQPPK_	ENSG00000145012|ENST00000617246|LPP;LPP|p.C364Lfs*29|1|0.29|ENSG00000145012|chr3:188609815-188609816|-/C|frameshift_variant	77.31757898189308	0.1091473830098891	1				NaN	NaN	0	NaN	843	2872	3716
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3718	16.39	NaN	2256.6	30	0	255.69	0.106	+			39109	SSTDINVKK	9	49	496.2744250351406	990.5342971370812	2	496.2742614746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSTDINVKK_	ENSG00000164749|ENST00000396423|HNF4G;nc|ENSG00000164749|Q14541-2|HNF4G;nc|ENSG00000164749|Q14541|HNF4G	64.20726635412375	0.17854274437659667	1				NaN	NaN	0	NaN	844	2872	3716
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3719	16.392	NaN	3298.1	30	0	655.63	0.106				-1	AVAIKAMAK	9	51	459.7755415416584	917.5365301501168	2	459.775634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_AVAIKAM(Oxidation (M))AK_	EIF5A|p.A145P|1|0.15|ENSG00000132507|chr17:7311608-7311608|G/C|missense_variant;ENSG00000132507|ENST00000336458|EIF5A;ENSG00000253626|ENST00000520547|EIF5AL1;nc|ENSG00000132507|P63241-2|EIF5A	47.91560031466742	0.327412564698279	1				NaN	NaN	0	NaN	845	2872	3716
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3720	16.394	NaN	1874.1	30	0	211	0.106	+			38409	SSAEYSVHK	9	54	504.2431029103289	1006.4716528874578	2	504.2436218261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSAEYSVHK_	ENSG00000058085|ENST00000264144|LAMC2;LAMC2|p.V488Sfs*24|1|0.32|ENSG00000058085|chr1:183227688-183227688|G/-|frameshift_variant;nc|ENSG00000058085|Q13753-2|LAMC2	127.46168284122857	0.016682644177004526	1				NaN	NaN	0	NaN	846	2872	3716
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3721	16.395	NaN	2092	30	0	389.04	0.036	+			23005	KVSKELVEK	9	54	530.3242258940708	1058.6338988549414	2	530.324951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KVSKELVEK_	ENSG00000125844|ENST00000377813|RRBP1;nc|ENSG00000125844|Q9P2E9-3|RRBP1;RRBP1|p.A628Gfs*69|1|0.35|ENSG00000125844|chr20:17621915-17621916|-/T|frameshift_variant	43.41853373365257	0.38016135533131235	1				NaN	NaN	0	NaN	847	2872	3716
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3729	16.415	NaN	7251.7	30	0	2114.6	0.214			+	-1	MPRTNMKQ	8	59	511.2485581728218	1020.4825634124436	2	511.2483825683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))PRTNMKQ_	REV__ENSG00000102710|ENST00000350612|SUPT20H;REV__nc|ENSG00000102710|Q8NEM7-2|SUPT20H;REV__nc|ENSG00000102710|Q8NEM7-3|SUPT20H;REV__SUPT20H|p.N613Ifs*8|1|0.2|ENSG00000102710|chr13:37019376-37019376|T/-|frameshift_variant;REV__SUPT20H|p.P464Hfs*86|1|0.27|ENSG00000102710|chr13:37024381-37024381|G/-|frameshift_variant	60.97194046774394	0.49215940876911696	1				NaN	NaN	0	NaN	852	2875	3728
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3730	16.419	NaN	1812.7	30	0	447.98	0.106			+	-1	NCEYCKET	8	23	552.2110269968467	1102.4075010604934	2	552.2115478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_NC(Carbamidomethyl (C))EYC(Carbamidomethyl (C))KET_	REV__ENSG00000169981|ENST00000396056|ZNF35	12.959181472943097	0.7887000251064199	1				NaN	NaN	0	NaN	853	2875	3728
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3731	16.421	NaN	2537.6	30	0	545.59	0.106	+			44921	TVAHKIMQK	9	59	528.3054795254633	1054.5964061177265	2	528.3054809570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVAHKIMQK_	ENSG00000134453|ENST00000379888|RBM17	68.84614121027924	0.14577793175421136	1				NaN	NaN	0	NaN	854	2875	3728
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3732	16.423	NaN	2319.3	30	0	667.38	0.106	+			45454	TWRGCGPGDP	10	39	523.2273997502513	1044.4402465673024	2	523.727783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TWRGCGPGDP_	ENST00000252818.4_1_19:18390620-18391193:-|nuORF	29.170058357718403	0.6416167986984785	1				NaN	NaN	0	NaN	855	2875	3728
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3733	16.424	NaN	2995.1	30	0	535.77	0.106				-1	MYPSRSDHS	9	34	548.2288586539385	1094.4431643746768	2	548.2293090820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_M(Oxidation (M))YPSRSDHS_	ENSG00000180336|ENST00000409122|MEIOC;nc|ENSG00000180336|A2RUB1-1|MEIOC;nc|ENSG00000180336|A2RUB1-2|MEIOC;nc|ENSG00000180336|A2RUB1-5|MEIOC	15.641811463095205	0.6112419832031292	1				NaN	NaN	0	NaN	856	2875	3728
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3734	16.426	NaN	3005.1	30	0	396.06	0.106	+			11889	FTNQSLWEMP	10	41	626.786443264861	NaN	0	626.785888671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FTNQSLWEMP_	ENSG00000100982|ENST00000372409|PCIF1	19.1035232394073	0.4201028297492154	1				NaN	NaN	0	NaN	857	2875	3728
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3735	16.428	NaN	2494.2	30	0	517.09	0.036				-1	KEDYACSCSG	10	29	560.2079445741325	1118.401336215065	2	560.2085571289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_KEDYACSC(Carbamidomethyl (C))SG_	ENST00000463348.5_1_6:30229165-30231201:+|nuORF	14.137123925751023	0.7446123510383054	1				NaN	NaN	0	NaN	858	2875	3728
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3745	16.451	NaN	7279.2	30	0	1210.1	0.214			+	39664	STIGECQKV	9	59	482.7406450458883	963.4667371585766	2	482.73809814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STIGECQKV_	REV__ENSG00000214517|ENST00000328257|PPME1;REV__nc|ENSG00000214517|Q9Y570-2|PPME1;REV__nc|ENSG00000214517|Q9Y570-4|PPME1	87.75429964447693	0.0711966946989736	1				NaN	NaN	0	NaN	865	2878	3744
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3746	16.455	NaN	5699.5	30	0	1046.5	0.106	+			40220	STSENITQK	9	57	504.25395757624847	1006.493362219297	2	504.2534484863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STSENITQK_	DDX3Y|p.V655Gfs*2|1|0.09|ENSG00000067048|chrY:12918097-12918098|-/G|frameshift_variant;ENSG00000067048|ENST00000336079|DDX3Y;ENSG00000215301|ENST00000644876|DDX3X;nc|ENSG00000067048|O15523-2|DDX3Y;nc|ENSG00000215301|O00571-2|DDX3X	138.06239232086	0.011389075116295402	1				NaN	NaN	0	NaN	866	2878	3744
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3747	16.457	NaN	9839.3	30	0	1078.1	0.106	+			2370	ANDVDFHSF	9	69	526.2255248208406	1050.4364967084812	2	526.2268676757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ANDVDFHSF_	ENSG00000110090|ENST00000265641|CPT1A;nc|ENSG00000110090|P50416-2|CPT1A	51.33545320467046	0.2872990594074956	1				NaN	NaN	0	NaN	867	2878	3744
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3748	16.459	NaN	9353.5	30	0	2072.8	0.106				-1	 	0	44	516.2333704469846	1030.4521879607692	2	516.2333374023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	868	2878	3744
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3749	16.461	NaN	5591.5	30	0	787.83	0.106	+			2282	ALYSGVHKK	9	66	501.7903676540554	1001.5661823749108	2	501.79052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ALYSGVHKK_	ENSG00000111961|ENST00000367467|SASH1;SASH1|p.N810Tfs*48|1|0.29|ENSG00000111961|chr6:148543895-148543895|A/-|frameshift_variant	120.30596017624542	0.02101454110788768	1				NaN	NaN	0	NaN	869	2878	3744
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3750	16.462	NaN	3951.9	30	0	1993.4	0.106	+			16505	HEVDPVRRA	9	33	360.1965748808185	1077.5678952426556	3	360.1962585449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HEVDPVRRA_	ENSG00000118971|ENST00000261254|CCND2;nc|ENSG00000118971|P30279-2|CCND2	24.20275056022122	0.577060078256802	1				NaN	NaN	0	NaN	870	2878	3744
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3751	16.464	NaN	1238.3	30	0	253	0.034	+			25671	LRDSAVPAP	9	35	463.2587097321956	924.5028665311912	2	463.2584533691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LRDSAVPAP_	ENST00000603798.5_1_12:51640581-51664197:-|nuORF	23.04248740728303	0.5879033540491928	1				NaN	NaN	0	NaN	871	2878	3744
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3757	16.48	NaN	46303	30	0	5231	0.214	+			3465	ASSAALRAPP	10	86	470.76412370932945	939.5136944854589	2	470.7640380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASSAALRAPP_	ENST00000246024.6_1_20:8000232-8000430:-|nuORF	90.36981228632155	0.12895663264417576	1				NaN	NaN	0	NaN	874	2881	3756
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3758	16.484	NaN	8333.9	30	0	1202.6	0.106	+			14401	GTAPAFKQK	9	68	474.26918479478513	946.5238166563703	2	474.2690124511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTAPAFKQK_	ENSG00000065534|ENST00000360304|MYLK;ENST00000504946.5_1_3:123400948-123419770:-|nuORF;MYLK|p.P1126Qfs*8|1|0.11|ENSG00000065534|chr3:123700091-123700091|G/-|frameshift_variant;nc|ENSG00000065534|Q15746-11|MYLK;nc|ENSG00000065534|Q15746-2|MYLK;nc|ENSG00000065534|Q15746-3|MYLK;nc|ENSG00000065534|Q15746-4|MYLK;nc|ENSG00000065534|Q15746-5|MYLK;nc|ENSG00000065534|Q15746-6|MYLK;nc|ENSG00000065534|Q15746-7|MYLK	122.1759843771914	0.019882474861609503	1				NaN	NaN	0	NaN	875	2881	3756
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3759	16.486	NaN	7038.6	30	0	602.25	0.106			+	32058	QRVSTKGL	8	66	444.766796028443	887.5190391236861	2	444.76666259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QRVSTKGL_	REV__ENSG00000089820|ENST00000350060|ARHGAP4;REV__ENST00000404127.6_1_X:153173185-153186849:-|nuORF;REV__ENST00000470209.5_1_X:153173185-153178999:-|nuORF;REV__nc|ENSG00000089820|P98171-2|ARHGAP4	73.97473282117947	0.3737790450121076	1				NaN	NaN	0	NaN	876	2881	3756
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3760	16.488	NaN	6122.7	30	0	806.32	0.106			+	-1	QFCCPEEGC	9	41	565.1930448507408	1128.3715367682814	2	565.1945190429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_QFC(Carbamidomethyl (C))C(Carbamidomethyl (C))PEEGC_	REV__ENSG00000183632|ENST00000398682|TP53TG3;REV__ENSG00000205456|ENST00000398664|TP53TG3D;REV__ENSG00000205457|ENST00000561509|TP53TG3C;REV__ENSG00000261509|ENST00000341305|TP53TG3B;REV__ENSG00000275034|ENST00000623491|TP53TG3E;REV__ENSG00000278848|ENST00000623042|TP53TG3F;REV__nc|ENSG00000278848|Q9ULZ0-1|TP53TG3;REV__nc|ENSG00000278848|Q9ULZ0-3|TP53TG3	23.04248740728303	0.5879033540491928	1				NaN	NaN	0	NaN	877	2881	3756
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3761	16.49	NaN	5447.8	30	0	1548.4	0.106			+	30691	QCSSKNYCL	9	47	523.2273997502513	1044.4402465673024	2	523.2280883789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QCSSKNYCL_	REV__ENST00000420027.3_1_20:48699081-48699147:-|nuORF	27.882242232435846	0.5426732730940306	1				NaN	NaN	0	NaN	878	2881	3756
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3762	16.491	NaN	4191.8	30	0	1246.3	0.106			+	-1	CDEECTDKG	9	41	557.1956019249924	1112.3766509167847	2	557.1962280273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))DEEC(Carbamidomethyl (C))TDKG_	REV__AKAP4|p.E702Qfs*5|1|0.05|ENSG00000147081|chrX:50192610-50192611|-/CTTGG|frameshift_variant;REV__AKAP4|p.P607Lfs*25|1|0.54|ENSG00000147081|chrX:50192893-50192893|G/-|frameshift_variant;REV__ENSG00000147081|ENST00000358526|AKAP4;REV__nc|ENSG00000147081|Q5JQC9-2|AKAP4	20.94693142431847	0.6074874384046576	1				NaN	NaN	0	NaN	879	2881	3756
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3763	16.493	NaN	3786.5	30	0	664.88	0.036			+	-1	GDQFPMNHC	9	37	553.2139130538202	1104.4132731744403	2	553.21435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_GDQFPMNHC(Carbamidomethyl (C))_	REV__ENST00000412609.5_1_19:40170059-40174276:+|nuORF;REV__ENST00000598164.2_1_19:40172096-40174784:+|nuORF	29.14955571784316	0.5308295550522326	1				NaN	NaN	0	NaN	880	2881	3756
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3769	16.508	NaN	4548.9	30	0	359.74	0.214			+	38436	SSALLNKH	8	58	435.2456917625877	868.4768305919754	2	435.2456359863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSALLNKH_	REV__ENSG00000143207|ENST00000367669|COP1;REV__nc|ENSG00000143207|Q8NHY2-2|COP1;REV__nc|ENSG00000143207|Q8NHY2-3|COP1;REV__nc|ENSG00000143207|Q8NHY2-4|COP1	90.77665401227738	0.27511901818546464	1				NaN	NaN	0	NaN	883	2884	3768
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3770	16.512	NaN	4222.8	30	0	1351.3	0.106	+			8705	EECMLAVD	8	41	455.188481859935	908.36241078667	2	455.1885681152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EECMLAVD_	ENSG00000128731|ENST00000261609|HERC2;ENST00000570209.1_1_15:31108772-31126588:+|nuORF	38.80614096846853	0.6637206697844082	1				NaN	NaN	0	NaN	884	2884	3768
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3771	16.514	NaN	4109.9	30	0	646.63	0.106			+	-1	EQTGLMESQ	9	50	519.7249050553411	1037.435257177482	2	519.725341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_EQTGLM(Oxidation (M))ESQ_	REV__ENSG00000173442|ENST00000309295|EHBP1L1;REV__ENST00000526990.1_1_11:65349145-65351290:+|nuORF	34.172542307311794	0.4838870758800184	1				NaN	NaN	0	NaN	885	2884	3768
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3772	16.515	NaN	4833.9	30	0	1224	0.106	+			4784	ATNKFITKDK	10	58	583.332759933665	1164.6509669341299	2	583.3331298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATNKFITKDK_	ENSG00000106031|ENST00000649031|HOXA13	73.84112541714126	0.2459384371494077	1				NaN	NaN	0	NaN	886	2884	3768
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3773	16.517	NaN	10393	30	0	4348.5	0.106	+			32511	QVQPVDGATRK	11	69	599.8307332765598	1197.6469136199196	2	599.8309326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QVQPVDGATRK_	ENSG00000182307|ENST00000331434|C8orf33;ENST00000524395.5_1_8:146277890-146279540:+|nuORF;ENST00000530455.5_1_8:146277890-146279540:+|nuORF;ENST00000534350.5_1_8:146279384-146279540:+|nuORF;nc|nan|Q9H7E9-2|C8orf33	93.5975768576971	0.08404719173293068	1				NaN	NaN	0	NaN	887	2884	3768
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3774	16.519	NaN	1658.9	30	0	323.24	0.106			+	18229	INMLNYNP	8	30	489.7382399704036	977.4619270076072	2	489.73846435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_INMLNYNP_	REV__ENSG00000137812|ENST00000399668|KNL1;REV__nc|ENSG00000137812|Q8NG31|KNL1	12.959181472943097	0.7887000251064199	1				NaN	NaN	0	NaN	888	2884	3768
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3775	16.521	NaN	1809.8	30	0	274.73	0.032	+			14809	GTLGAVHK	8	44	391.72982708055923	781.4451012279185	2	391.7297668457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GTLGAVHK_	ENSG00000099785|ENST00000215555|MARCHF2;nc|ENSG00000099785|Q9P0N8-2|MARCHF2	88.64286706044652	0.2815785716369046	1				NaN	NaN	0	NaN	889	2884	3768
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3784	16.542	NaN	13357	30	0	776.56	0.214	+			5483	AVAAVAARR	9	63	442.77473635894506	883.5349197846901	2	442.7746276855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVAAVAARR_	ENSG00000089597|ENST00000356638|GANAB;ENST00000526392.1_1_11:62402291-62414071:-|nuORF;ENST00000534419.1_1_11:62407519-62414080:-|nuORF;GANAB|p.L23*|4|0.22|ENSG00000089597|chr11:62639702-62639702|A/-|frameshift_variant;nc|ENSG00000089597|Q14697-2|GANAB;nc|ENSG00000089597|Q14697-3|GANAB	170.31369407433692	0.002713371642900501	1				NaN	NaN	0	NaN	895	2887	3783
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3785	16.546	NaN	9935.2	30	0	1375.9	0.106			+	24789	LIGVQSLLEPD	11	80	592.3309271317852	1182.6473013303703	2	592.3308715820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LIGVQSLLEPD_	REV__ENST00000530283.1_1_11:111385578-111385695:-|nuORF	45.908116695636124	0.4771019740774998	1				NaN	NaN	0	NaN	896	2887	3783
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3786	16.548	NaN	6327.7	30	0	1366.8	0.106			+	45970	VASYPLLPQ	9	67	494.27728626808135	NaN	0	494.3005676269531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VASYPLLPQ_	REV__ENSG00000177352|ENST00000321895|CCDC71	35.61828744233558	0.29773779453147337	1				NaN	NaN	0	NaN	897	2887	3783
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3787	16.55	NaN	3654.5	30	0	402.98	0.106	+			43654	TISVNRTTY	9	57	527.7803955078125	NaN	0	527.7803955078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TISVNRTTY_	tr|U7T2D7|U7T2D7_FUSNUAutotransporterdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00531PE=4SV=1	37.81151784470057	0.28666463014928195	1				NaN	NaN	0	NaN	898	2887	3783
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3788	16.552	NaN	3366.9	30	0	399.13	0.106				-1	AVCEKTFKH	9	51	560.2844348334817	1118.5543167337632	2	560.2849731445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_AVC(Carbamidomethyl (C))EKTFKH_	ENSG00000166188|ENST00000299237|ZNF319	42.86426827375447	0.38666266728046506	1				NaN	NaN	0	NaN	899	2887	3783
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3789	16.553	NaN	10417	30	0	2118.8	0.106			+	20306	KEQCPPLPRS	10	70	577.8038739674877	1153.5931950017753	2	577.8046264648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KEQCPPLPRS_	REV__ENSG00000164659|ENST00000450689|ELAPOR2	83.6470233535746	0.16744595502813267	1				NaN	NaN	0	NaN	900	2887	3783
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3790	16.555	NaN	1670.8	30	0	271.77	0.036	+			47139	VLQFEPGHI	9	42	347.18910225258435	NaN	0	347.1890869140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VLQFEPGHI_	ENSG00000170962|ENST00000393158|PDGFD;nc|ENSG00000170962|Q9GZP0-2|PDGFD	37.81151784470057	0.28666463014928195	1				NaN	NaN	0	NaN	901	2887	3783
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3801	16.58	NaN	5191.2	30	0	699.99	0.214			+	41903	SVVDNVAKK	9	65	480.27954918230193	958.5445454314039	2	480.27935791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVVDNVAKK_	REV__ENST00000483082.1_1_1:43637412-43637789:-|nuORF	77.31757898189308	0.1091473830098891	1				NaN	NaN	0	NaN	909	2890	3800
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3802	16.584	NaN	2864.8	30	0	461.91	0.106				-1	SPDMQGSHQLL	11	41	614.7852320724236	1227.555911211647	2	614.785400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_SPDM(Oxidation (M))QGSHQLL_	ENSG00000073350|ENST00000392550|LLGL2;ENST00000545227.6_1_17:73554011-73570984:+|nuORF;nc|ENSG00000073350|Q6P1M3-2|LLGL2	16.71738777980365	0.7922119881075679	1				NaN	NaN	0	NaN	910	2890	3800
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3803	16.586	NaN	1875.4	30	0	518.3	0.106			+	4525	ATKQRLDIR	9	38	367.55595600699394	NaN	0	367.5560302734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATKQRLDIR_	REV__ENSG00000091409|ENST00000684293|ITGA6;REV__nc|ENSG00000091409|P23229-3|ITGA6;REV__nc|ENSG00000091409|P23229-4|ITGA6;REV__nc|ENSG00000091409|P23229-5|ITGA6;REV__nc|ENSG00000091409|P23229-6|ITGA6;REV__nc|ENSG00000091409|P23229-7|ITGA6;REV__nc|ENSG00000091409|P23229-9|ITGA6;REV__nc|ENSG00000091409|P23229|ITGA6	36.446750945000026	0.29355505452396785	1				NaN	NaN	0	NaN	911	2890	3800
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3804	16.588	NaN	1828.8	30	0	282.86	0.106	+			5504	AVAEDGGLKK	10	52	494.27728626808135	NaN	0	494.2774658203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVAEDGGLKK_	ENSG00000137692|ENST00000260247|DCUN1D5;ENST00000529076.1_1_11:102960023-102962823:-|nuORF	64.20726635412375	0.1999210135493042	1				NaN	NaN	0	NaN	912	2890	3800
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3805	16.59	NaN	2421.6	30	0	224.89	0.106				-1	KGCKQPRSP	9	53	529.2828792555234	1056.5512055778468	2	529.2828979492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_KGC(Carbamidomethyl (C))KQPRSP_	ENST00000309315.8_1_7:44809294-44809357:+|nuORF	62.107414245175825	0.1960472003779324	1				NaN	NaN	0	NaN	913	2890	3800
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3806	16.591	NaN	1694.5	30	0	356.29	0.106				-1	RTMRSTRGST	10	37	584.7977798855891	NaN	0	584.7978515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_RTM(Oxidation (M))RSTRGST_	SRCIN1|p.M16Cfs*44|1|0.18|ENSG00000277363|chr17:38578769-38578769|G/-|frameshift_variant	21.68575002086885	0.4201028297492154	1				NaN	NaN	0	NaN	914	2890	3800
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3807	16.593	NaN	2286.4	30	0	569.44	0.039	+			22662	KTYIPPKGETK	11	42	421.24313537299514	1260.7075767191855	3	421.2435607910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KTYIPPKGETK_	ENSG00000189403|ENST00000341423|HMGB1;ENST00000559968.1_1_14:68082236-68082464:+|nuORF;nc|ENSG00000124097|B2RPK0|HMGB1P1	14.086013023434994	0.8045329596154472	1				NaN	NaN	0	NaN	915	2890	3800
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3813	16.609	NaN	23414	30	0	7292.7	0.214	+			3023	ASFDKAKLKK	10	64	379.2325694668517	1134.6758790007552	3	379.23272705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASFDKAKLKK_	ENSG00000034510|ENST00000233143|TMSB10	66.96192283764107	0.30252237217063654	1				NaN	NaN	0	NaN	918	2893	3812
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3814	16.613	NaN	4870.9	30	0	980.99	0.106	+			36884	SIGPVGKSK	9	63	436.7634774454752	871.5124019577504	2	436.7637023925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SIGPVGKSK_	ENSG00000064787|ENST00000688948|BCAS1;nc|ENSG00000064787|O75363-2|BCAS1;nc|ENSG00000064787|O75363|BCAS1	65.46538089061403	0.16805504838372562	1				NaN	NaN	0	NaN	919	2893	3812
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3815	16.615	NaN	11778	30	0	2933.7	0.106	+			3024	ASFDKAKLKK	10	68	568.3448829057543	1134.6752128783085	2	568.3463745117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASFDKAKLKK_	ENSG00000034510|ENST00000233143|TMSB10	97.59673978297657	0.0875810153152853	1				NaN	NaN	0	NaN	920	2893	3812
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3816	16.617	NaN	3018.8	30	0	413.51	0.106	+			5039	ATSGGSAEQIK	11	56	524.7671842605447	1047.5198155878893	2	524.767822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATSGGSAEQIK_	ENSG00000114030|ENST00000344337|KPNA1	66.9202029811203	0.26168278700588427	1				NaN	NaN	0	NaN	921	2893	3812
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3817	16.619	NaN	8312.9	30	0	2034.2	0.106				-1	SCCPMSCAK	9	66	522.1916032826662	1042.3686536321322	2	522.1928100585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C)	_SCC(Carbamidomethyl (C))PMSC(Carbamidomethyl (C))AK_	ENSG00000205362|ENST00000290705|MT1A	54.776311868738084	0.25715957988447635	1				NaN	NaN	0	NaN	922	2893	3812
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3818	16.62	NaN	1849.8	30	0	249.78	0.106			+	13542	GLSKEVVGK	9	52	458.7766763610808	915.5387997889616	2	458.7815246582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GLSKEVVGK_	REV__ENSG00000181418|ENST00000421952|DDN	34.172542307311794	0.4838870758800184	1				NaN	NaN	0	NaN	923	2893	3812
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3819	16.622	NaN	1392.8	30	0	177.99	0.033			+	2005	AKKLPSEK	8	47	450.7795669496139	899.5445809660279	2	450.7791442871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AKKLPSEK_	REV__tr|U7SF57|U7SF57_FUSNUCytidylatekinaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=cmkPE=3SV=1	31.954861631926434	0.7126016770032289	1				NaN	NaN	0	NaN	924	2893	3812
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3824	16.637	NaN	5779.2	30	0	1474.5	0.214				-1	SCCPVGCSKC	10	49	348.4632977726501	1042.3680639181503	3	348.4638977050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SCC(Carbamidomethyl (C))PVGCSKC_	ENSG00000198417|ENST00000334350|MT1F;ENST00000564295.1_1_16:56692857-56693073:+|nuORF	32.03412808689991	0.6182276479942341	1				NaN	NaN	0	NaN	926	2896	3823
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3825	16.64	NaN	2916.7	30	0	391.69	0.106			+	14253	GSSVTPLKK	9	60	458.7766763610808	915.5387997889616	2	458.77655029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSSVTPLKK_	REV__ENST00000375003.6_1_1:21083735-21091978:-|nuORF	56.72105179125745	0.24094814563026265	1				NaN	NaN	0	NaN	927	2896	3823
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3826	16.642	NaN	2072.6	30	0	268.91	0.106			+	51023	YKHRNIEPN	9	55	585.8058471679688	NaN	0	585.8058471679688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YKHRNIEPN_	REV__L1MC1_dup2138|chr3:11203375-11203979:-|1.868897465743888|0.2278259033593264|3.04|481.0|10|2|sense	52.936696900407355	0.1864545979552969	1				NaN	NaN	0	NaN	928	2896	3823
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3827	16.644	NaN	1984.5	30	0	326.8	0.106				-1	TERQKVHCL	9	40	390.87274653895633	NaN	0	390.8725891113281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_TERQKVHC(Carbamidomethyl (C))L_	ENSG00000110367|ENST00000534980|DDX6	37.81151784470057	0.28666463014928195	1				NaN	NaN	0	NaN	929	2896	3823
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3828	16.646	NaN	1472.1	30	0	354.99	0.106			+	16633	HHIRFIPW	8	42	553.304931640625	NaN	0	553.304931640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HHIRFIPW_	REV__ENSG00000106245|ENST00000222969|BUD31;REV__ENST00000466798.1_1_7:99013792-99015269:+|nuORF;REV__ENST00000471813.1_1_7:99008715-99013888:+|nuORF;REV__nc|ENSG00000106245|P41223-2|BUD31	26.79610172149135	1.7418937515398478	1				NaN	NaN	0	NaN	930	2896	3823
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3829	16.648	NaN	1396.7	30	0	228.01	0.04				-1	ACMEEMHQVAI	11	29	667.782918512197	NaN	0	667.7825317382812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),Oxidation (M)	_AC(Carbamidomethyl (C))M(Oxidation (M))EEMHQVAI_	ENSG00000125450|ENST00000245544|NUP85;ENST00000449421.6_1_17:73205928-73222855:+|nuORF;ENST00000577208.5_1_17:73201841-73212422:+|nuORF;ENST00000583548.1_1_17:73204633-73212422:+|nuORF;ENST00000583948.5_1_17:73201841-73222120:+|nuORF;nc|ENSG00000125450|Q9BW27-3|NUP85	18.262085536374414	0.456735970842152	1				NaN	NaN	0	NaN	931	2896	3823
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3838	16.669	NaN	3358.9	30	0	398.9	0.214	+			45684	VAAEKSFNK	9	60	497.27131894870615	992.5280849642123	2	497.2716064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VAAEKSFNK_	ENSG00000086589|ENST00000199814|RBM22;ENST00000520132.1_1_5:150071315-150073858:-|nuORF;nc|ENSG00000086589|Q9NW64-2|RBM22	134.81075121484326	0.012914550297035062	1				NaN	NaN	0	NaN	937	2899	3837
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3839	16.673	NaN	3749	30	0	1101	0.106	+			30352	PTYRAQGVV	9	46	330.85034612066465	989.5292089621939	3	330.8504333496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PTYRAQGVV_	BSN|p.P3390Hfs*97|1|0.22|ENSG00000164061|chr3:49662009-49662009|C/-|frameshift_variant;BSN|p.P3790Hfs*5|1|0.5|ENSG00000164061|chr3:49663523-49663523|C/-|frameshift_variant;ENSG00000164061|ENST00000296452|BSN	18.324413293986947	0.6112419832031293	1				NaN	NaN	0	NaN	938	2899	3837
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3840	16.675	NaN	753.35	30	0	113.43	0.106			+	-1	MVPLHRGA	8	29	448.7433096468444	NaN	0	448.74334716796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))VPLHRGA_	REV__C2CD5|p.D676Mfs*40|1|0.33|ENSG00000111731|chr12:22474769-22474769|T/-|frameshift_variant;REV__C2CD5|p.F331Lfs*5|1|0.32|ENSG00000111731|chr12:22513345-22513345|C/-|frameshift_variant;REV__ENSG00000111731|ENST00000446597|C2CD5;REV__ENST00000535304.1_1_12:22688182-22697084:-|nuORF;REV__ENST00000541310.5_1_12:22631189-22697084:-|nuORF;REV__nc|ENSG00000111731|Q86YS7-2|C2CD5;REV__nc|ENSG00000111731|Q86YS7-4|C2CD5;REV__nc|ENSG00000111731|Q86YS7-5|C2CD5;REV__nc|ENSG00000111731|Q86YS7|C2CD5	13.775330524044264	1.7418937515398478	1				NaN	NaN	0	NaN	939	2899	3837
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3841	16.677	NaN	974.54	30	0	147.14	0.036				-1	MAGAGALVLEV	11	30	544.7891165611665	NaN	0	544.7886962890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))M(Oxidation (M))AGAGALVLEV_	ENST00000379160.3_1_20:5107224-5107266:-|nuORF	29.14955571784316	0.43550879202308607	1				NaN	NaN	0	NaN	940	2899	3837
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3849	16.695	NaN	4271.9	30	0	823.55	0.214	+			32960	REDNQTNRL	9	62	573.2860577289774	1144.5575625247548	2	573.28662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_REDNQTNRL_	ENSG00000087460|ENST00000371085|GNAS;ENST00000313949.11_1_20:57415898-57485881:+|nuORF;ENST00000371075.7_3_20:57415898-57485881:+|nuORF;ENST00000476196.5_1_20:57478538-57485881:+|nuORF;ENST00000477931.5_1_20:57464155-57485881:+|nuORF;ENST00000480975.5_1_20:57464272-57485881:+|nuORF;ENST00000496934.5_1_20:57473969-57485881:+|nuORF;nc|ENSG00000087460|P63092-2|GNAS;nc|ENSG00000087460|P63092-3|GNAS;nc|ENSG00000087460|P63092-4|GNAS;nc|ENSG00000087460|Q5JWF2-2|GNAS;nc|ENSG00000087460|Q5JWF2|GNAS	80.45461616416974	0.09558281504443908	1				NaN	NaN	0	NaN	945	2902	3848
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3850	16.699	NaN	2281.7	30	0	411.68	0.106			+	19824	KEDNKEKL	8	54	502.2745572314779	1002.5345615297558	2	502.2742004394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEDNKEKL_	REV__tr|U7T6Y3|U7T6Y3_FUSNUPeptidylprolylisomeraseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00051PE=4SV=1	60.11826168202944	0.5006107059937851	1				NaN	NaN	0	NaN	946	2902	3848
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3851	16.7	NaN	689.5	30	0	100.94	0.106				-1	VSAQIRCK	8	46	481.2654113769531	NaN	0	481.2654113769531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_VSAQIRC(Carbamidomethyl (C))K_	ENSG00000162989|ENST00000295101|KCNJ3;KCNJ3|p.P329Lfs*2|2|0.25|ENSG00000162989|chr2:154854785-154854785|T/-|frameshift_variant;nc|ENSG00000162989|P48549-2|KCNJ3	47.91560031466742	1.7418937515398478	1				NaN	NaN	0	NaN	947	2902	3848
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3852	16.702	NaN	4166.9	30	0	1274.6	0.106				-1	LETCWSQWPTS	11	43	697.8056271014442	1393.5967012696883	2	698.306396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_LETC(Carbamidomethyl (C))WSQWPTS_	ENST00000420296.1_3_19:54610074-54610206:+|nuORF	13.45404412870281	0.8074920481021843	1				NaN	NaN	0	NaN	948	2902	3848
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3853	16.704	NaN	1811.2	30	0	289.95	0.106			+	44234	TRSFSLQK	8	52	483.7716661427531	965.5287793523062	2	483.7715148925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TRSFSLQK_	REV__ENSG00000140534|ENST00000268138|TICRR;REV__nc|ENSG00000140534|Q7Z2Z1-2|TICRR;REV__TICRR|p.P1378Lfs*50|1|0.23|ENSG00000140534|chr15:89624439-89624439|C/-|frameshift_variant;REV__TICRR|p.R1015Q|1|0.39|ENSG00000140534|chr15:89619732-89619732|G/A|missense_variant	51.19269402634007	0.5868595481438337	1				NaN	NaN	0	NaN	949	2902	3848
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3854	16.706	NaN	3097.3	30	0	841.14	0.035	+			14627	GTGNMEIKK	9	52	489.2574397004803	976.5003264677606	2	489.258056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTGNMEIKK_	ENSG00000138496|ENST00000682323|PARP9;nc|ENSG00000138496|Q8IXQ6-3|PARP9;nc|ENSG00000138496|Q8IXQ6|PARP9;PARP9|p.T633Pfs*5|2|0.22|ENSG00000138496|chr3:122537047-122537047|T/-|frameshift_variant	78.26377905018397	0.10505600812668463	1				NaN	NaN	0	NaN	950	2902	3848
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3862	16.724	NaN	1608.7	30	0	266.25	0.214	+			22786	KVFGGTVHK	9	46	486.7848086765335	971.555064419867	2	486.7848205566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVFGGTVHK_	ENSG00000163655|ENST00000496455|GMPS;GMPS|p.S473Lfs*26|1|0.37|ENSG00000163655|chr3:155922281-155922281|T/-|frameshift_variant;nc|ENSG00000163655|P49915-2|GMPS	62.107414245175825	0.1960472003779324	1				NaN	NaN	0	NaN	955	2905	3861
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3863	16.728	NaN	4450.6	30	0	826.43	0.106	+			3489	ASSHVPIQK	9	44	322.850334016953	965.5291726510591	3	322.850341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASSHVPIQK_	ENSG00000158290|ENST00000371322|CUL4B;nc|ENSG00000158290|Q13620|CUL4B	45.97224482568171	0.3502073465782774	1				NaN	NaN	0	NaN	956	2905	3861
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3864	16.73	NaN	1121	30	0	118.56	0.106	+			40319	STSTSIKVK	9	37	475.7790443292769	NaN	0	475.77899169921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STSTSIKVK_	ENSG00000135974|ENST00000258457|C2orf49;nc|nan|Q9BVC5-2|C2orf49	36.446750945000026	0.29355505452396785	1				NaN	NaN	0	NaN	957	2905	3861
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3865	16.731	NaN	2042	30	0	496.52	0.106	+			41971	SVYAGGRGPAK	11	49	531.788063063078	1061.5615731929558	2	531.7882690429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVYAGGRGPAK_	ENST00000296473.7_3_3:49967084-49967270:-|nuORF	40.05817265558897	0.5571470695993369	1				NaN	NaN	0	NaN	958	2905	3861
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3866	16.733	NaN	2191	30	0	417.51	0.106	+			5418	ATYHGSFSTKK	11	54	613.811750576686	1225.608948220172	2	613.8120727539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATYHGSFSTKK_	ENSG00000163359|ENST00000295550|COL6A3;ENST00000491769.1_1_2:238233419-238250825:-|nuORF;ENST00000493608.1_1_2:238242084-238243404:-|nuORF;nc|ENSG00000163359|P12111-2|COL6A3;nc|ENSG00000163359|P12111-4|COL6A3	53.08895987439943	0.38514566451266113	1				NaN	NaN	0	NaN	959	2905	3861
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3867	16.735	NaN	1002.1	30	0	273.45	0.106				-1	STCDKSFCR	9	31	580.7453002929688	NaN	0	580.7453002929688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Carbamidomethyl (C)	_STC(Carbamidomethyl (C))DKSFC(Carbamidomethyl (C))R_	ENSG00000181472|ENST00000325144|ZBTB2;ZBTB2|p.F476Lfs*3|1|0.24|ENSG00000181472|chr6:151365638-151365638|A/-|frameshift_variant	15.641811463095205	0.38404136392510424	1				NaN	NaN	0	NaN	960	2905	3861
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3868	16.737	NaN	2313.2	30	0	661.56	0.035			+	7286	DAPVRVVRL	9	50	512.8173110726703	1023.6200692121407	2	512.816650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DAPVRVVRL_	REV__ENSG00000116096|ENST00000234454|SPR;REV__ENST00000498749.1_1_2:73114531-73115553:+|nuORF	45.9519527083369	0.35044536499095585	1				NaN	NaN	0	NaN	961	2905	3861
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3876	16.755	NaN	2871.7	30	0	559.92	0.214	+			23075	KVVDLANKK	9	56	507.81887945144143	1013.6232059696829	2	507.8193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVVDLANKK_	ENSG00000104413|ENST00000433389|ESRP1;ESRP1|p.L333Sfs*55|1|0.35|ENSG00000104413|chr8:94668009-94668009|G/-|frameshift_variant;ESRP1|p.N512Hfs*7|2|0.33|ENSG00000104413|chr8:94674383-94674384|AA/-|frameshift_variant;ESRP1|p.N512Kfs*8|1|0.48|ENSG00000104413|chr8:94674382-94674383|-/A|frameshift_variant;ESRP1|p.N512Tfs*2|2|0.36|ENSG00000104413|chr8:94674383-94674383|A/-|frameshift_variant;nc|ENSG00000104413|Q6NXG1-2|ESRP1;nc|ENSG00000104413|Q6NXG1-3|ESRP1;nc|ENSG00000104413|Q6NXG1-4|ESRP1;nc|ENSG00000104413|Q6NXG1-5|ESRP1	105.16503226865211	0.03393154504579365	1				NaN	NaN	0	NaN	966	2908	3875
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3877	16.759	NaN	2187	30	0	319.26	0.106	+			19435	KAQKELEEQ	9	67	551.7897338867188	NaN	0	551.7897338867188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KAQKELEEQ_	ENSG00000137710|ENST00000645495|RDX;nc|ENSG00000137710|P35241-2|RDX;nc|ENSG00000137710|P35241-4|RDX;nc|ENSG00000137710|P35241-5|RDX	67.49366992349736	0.1173583512313808	1				NaN	NaN	0	NaN	967	2908	3875
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3878	16.761	NaN	960.4	30	0	225.59	0.106				-1	DEIRMHLQ	8	38	529.2579662731644	1056.5013796131286	2	529.258056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_DEIRM(Oxidation (M))HLQ_	ENSG00000113318|ENST00000265081|MSH3;MSH3|p.N1020Ifs*40|1|0.46|ENSG00000113318|chr5:80864865-80864865|A/-|frameshift_variant;MSH3|p.N1020Kfs*17|1|0.43|ENSG00000113318|chr5:80864864-80864865|-/A|frameshift_variant;MSH3|p.N861Mfs*6|1|0.43|ENSG00000113318|chr5:80792766-80792766|A/-|frameshift_variant;MSH3|p.V745Ifs*28|1|0.05|ENSG00000113318|chr5:80768981-80768982|-/CATATTCGAAGTTTAT|frameshift_variant	17.364965105453717	0.7956685240855921	1				NaN	NaN	0	NaN	968	2908	3875
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3879	16.762	NaN	1045	30	0	205.94	0.033	+			1744	AHVLNDVK	8	34	448.2533111072587	NaN	0	448.252685546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AHVLNDVK_	tr|U7SU32|U7SU32_FUSNUAmidohydrolaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01290PE=4SV=1	24.20275056022122	1.7418937515398478	1				NaN	NaN	0	NaN	969	2908	3875
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3888	16.782	NaN	3233.1	30	0	957.96	0.214			+	20578	KFTSWSQHR	9	51	588.7992149272427	1175.5838769212853	2	588.7990112304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KFTSWSQHR_	REV__ENSG00000121753|ENST00000373658|ADGRB2;REV__ENST00000530999.1_1_1:32193023-32200902:-|nuORF;REV__nc|ENSG00000121753|O60241-2|ADGRB2;REV__nc|ENSG00000121753|O60241-3|ADGRB2;REV__nc|ENSG00000121753|O60241-4|ADGRB2	49.536043120802724	0.308405419312776	1				NaN	NaN	0	NaN	975	2911	3887
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3889	16.786	NaN	1444.3	30	0	149.65	0.106				-1	SICKGLNNK	9	43	517.276524220191	NaN	0	517.2769165039062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SIC(Carbamidomethyl (C))KGLNNK_	ENST00000294753.8_1_1:247493325-247494987:-|nuORF	47.657333605630114	0.2228375344433429	1				NaN	NaN	0	NaN	976	2911	3887
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3890	16.788	NaN	1442.9	30	0	274.73	0.106			+	-1	EVCVSLVQG	9	39	495.75075027719953	989.4869476211991	2	495.75048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_EVC(Carbamidomethyl (C))VSLVQG_	REV__CLTC-CEP95|1|fusion;REV__CLTC|p.A1374*|1|0.05|ENSG00000141367|chr17:59683464-59683465|-/TA|frameshift_variant;REV__CLTC|p.D632Yfs*7|1|0.15|ENSG00000141367|chr17:59666589-59666590|-/TTACA|frameshift_variant;REV__CLTCL1|p.H915Ifs*56|1|0.35|ENSG00000070371|chr22:19221430-19221430|G/-|frameshift_variant;REV__CLTCL1|p.M473Ifs*76|1|0.05|ENSG00000070371|chr22:19233268-19233269|-/TCGG|frameshift_variant;REV__CLTCL1|p.T738Qfs*24|1|0.03|ENSG00000070371|chr22:19223971-19223972|-/TTCTG|frameshift_variant;REV__ENSG00000070371|ENST00000427926|CLTCL1;REV__ENSG00000141367|ENST00000269122|CLTC;REV__nc|ENSG00000070371|P53675-2|CLTCL1;REV__nc|ENSG00000141367|Q00610-2|CLTC	53.351449002276354	0.2690372970092375	1				NaN	NaN	0	NaN	977	2911	3887
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3891	16.79	NaN	1573.2	30	0	169.29	0.03	+			10761	FAGAKGGG	8	42	332.6741208911668	663.3336888491336	2	332.67413330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FAGAKGGG_	ENST00000424404.1_1_7:121947107-121947290:+|nuORF	9.47055586587303	0.7831821681235687	1				NaN	NaN	0	NaN	978	2911	3887
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3897	16.806	NaN	981.38	30	0	195.67	0.214				-1	 	0	36	400.7133299260903	799.4121069189806	2	400.7132873535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	981	2914	3896
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3898	16.809	NaN	990.29	30	0	167.35	0.035	+			38865	SSNSYAIKK	9	39	499.2691776560944	996.5238023789889	2	499.2682189941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSNSYAIKK_	ENSG00000083845|ENST00000196551|RPS5;ENST00000599232.1_1_19:58906030-58906114:+|nuORF	30.568863376406313	0.5175653706841606	1				NaN	NaN	0	NaN	982	2914	3896
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3905	16.826	NaN	1459.4	30	0	228.76	0.214	+			9162	EGNVFMYY	8	39	511.71809444221907	1021.4216359512382	2	512.2186279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EGNVFMYY_	ENSG00000112697|ENST00000230461|TMEM30A;nc|ENSG00000112697|Q9NV96-2|TMEM30A	20.481830146152948	0.8005983782650069	1				NaN	NaN	0	NaN	986	2917	3904
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3906	16.829	NaN	1185.2	30	0	96.739	0.035	+			37578	SLNKQIAQK	9	50	515.3064450034087	1028.5983370736174	2	515.3065185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLNKQIAQK_	ENSG00000125633|ENST00000376300|CCDC93;ENST00000460781.1_1_2:118709253-118753033:-|nuORF	58.22992032128504	0.22837015374068087	1				NaN	NaN	0	NaN	987	2917	3904
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3911	16.844	NaN	1462.6	30	0	182.58	0.214	+			6062	AVMPPGRSR	9	49	485.7658367475365	969.5171205618731	2	485.7657470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVMPPGRSR_	ENSG00000131037|ENST00000201647|EPS8L1;EPS8L1|p.D510Efs*3|1|0.38|ENSG00000131037|chr19:55086071-55086072|AC/-|frameshift_variant;EPS8L1|p.G206Afs*54|1|0.23|ENSG00000131037|chr19:55081330-55081336|GCGGGGC/-|frameshift_variant;nc|ENSG00000131037|Q8TE68-3|EPS8L1	32.81241826257853	0.4965981579233955	1				NaN	NaN	0	NaN	989	2920	3910
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3912	16.848	NaN	5864.5	30	0	2988.2	0.106	+			10209	ETFYIGKL	8	43	324.1797145824828	969.5173143476484	3	324.1796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ETFYIGKL_	ENSG00000109111|ENST00000314616|SUPT6H;SUPT6H|p.N1390Kfs*15|1|0.08|ENSG00000109111|chr17:28697042-28697043|-/GCAG|frameshift_variant	20.481830146152948	0.8005983782650069	1				NaN	NaN	0	NaN	990	2920	3910
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3913	16.85	NaN	1312.4	30	0	258.69	0.035			+	227	AALVLPTRAP	10	43	336.87835693359375	NaN	0	336.87835693359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AALVLPTRAP_	REV__ENSG00000050820|ENST00000162330|BCAR1;REV__ENST00000566982.1_1_16:75263411-75272069:-|nuORF;REV__nc|ENSG00000050820|P56945-2|BCAR1;REV__nc|ENSG00000050820|P56945-3|BCAR1;REV__nc|ENSG00000050820|P56945-4|BCAR1;REV__nc|ENSG00000050820|P56945-5|BCAR1;REV__nc|ENSG00000050820|P56945-6|BCAR1;REV__nc|ENSG00000050820|P56945-7|BCAR1;REV__nc|ENSG00000050820|P56945-8|BCAR1	23.04248740728303	0.42010282974921537	1				NaN	NaN	0	NaN	991	2920	3910
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3921	16.869	NaN	3077.8	30	0	763.26	0.214	+			3075	ASFSKRIQK	9	61	532.8143305326677	1063.6141081321352	2	532.8148193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASFSKRIQK_	ENSG00000164105|ENST00000296504|SAP30	40.77816245573522	0.41113185337114944	1				NaN	NaN	0	NaN	996	2923	3920
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3922	16.873	NaN	1314.5	30	0	138.87	0.106			+	-1	QWFAKGCES	9	49	556.7467275395383	1111.4789021458764	2	556.746826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_QWFAKGC(Carbamidomethyl (C))ES_	REV__ZNF135|p.R336W|1|0.45|ENSG00000176293|chr19:58067490-58067490|C/T|missense_variant	34.172542307311794	0.4838870758800184	1				NaN	NaN	0	NaN	997	2923	3920
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3923	16.875	NaN	3242.2	30	0	1051.5	0.106			+	44654	TTGAVSGSFVR	11	40	361.1925751711648	1080.5558961136944	3	361.1925354003906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TTGAVSGSFVR_	REV__ENST00000478000.5_1_7:944755-944842:-|nuORF	38.714083909724	0.5755383074156426	1				NaN	NaN	0	NaN	998	2923	3920
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3924	16.877	NaN	668.64	30	0	113.53	0.034			+	31255	QHLVKSAAS	9	34	470.7636150833245	939.512677233449	2	470.7632751464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QHLVKSAAS_	REV__ENSG00000133962|ENST00000256343|CATSPERB;REV__nc|ENSG00000133962|Q9H7T0-2|CATSPERB	27.882242232435846	0.5426732730940306	1				NaN	NaN	0	NaN	999	2923	3920
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3930	16.893	NaN	2986.3	30	0	1784.8	0.214	+			15064	GTPESVQSAK	10	41	502.25644157352787	1002.4983302138558	2	502.2568054199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTPESVQSAK_	ENSG00000162613|ENST00000370768|FUBP1;FUBP1|p.I301Yfs*22|2|0.26|ENSG00000162613|chr1:77964293-77964293|T/-|frameshift_variant;nc|ENSG00000162613|Q96AE4-2|FUBP1	23.37791116691581	0.6889178131139211	1				NaN	NaN	0	NaN	1002	2926	3929
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3931	16.897	NaN	1110.7	30	0	129.46	0.106				-1	CAPLMRQY	8	47	499.2333944592303	NaN	0	499.2334899902344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_CAPLM(Oxidation (M))RQY_	ENSG00000177283|ENST00000374694|FZD8	42.47446043378293	1.7418937515398478	1				NaN	NaN	0	NaN	1003	2926	3929
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3932	16.898	NaN	1302.8	30	0	225.35	0.036			+	29596	PFQYQSKIA	9	47	541.28580443476	1080.55705593632	2	541.2872314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PFQYQSKIA_	REV__ENSG00000109118|ENST00000332830|PHF12;REV__ENST00000582436.5_1_17:27237055-27251401:-|nuORF;REV__ENST00000582655.5_1_17:27237828-27251299:-|nuORF;REV__nc|ENSG00000109118|Q96QT6-2|PHF12;REV__nc|ENSG00000109118|Q96QT6-3|PHF12;REV__nc|ENSG00000109118|Q96QT6-5|PHF12;REV__PHF12|p.P882Qfs*30|1|0.22|ENSG00000109118|chr17:28906891-28906891|G/-|frameshift_variant	41.42661286455405	0.403525789677298	1				NaN	NaN	0	NaN	1004	2926	3929
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3937	16.913	NaN	4940.7	30	0	951.65	0.215	+			5086	ATSNVHMVK	9	61	493.757559062865	985.5005651925301	2	493.7575378417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSNVHMVK_	ENSG00000197256|ENST00000586659|KANK2;ENST00000590400.1_1_19:11303345-11305238:-|nuORF;KANK2|p.P430Rfs*5|1|0.23|ENSG00000197256|chr19:11178681-11178681|G/-|frameshift_variant;nc|ENSG00000197256|Q63ZY3-2|KANK2;nc|ENSG00000197256|Q63ZY3-3|KANK2	65.46538089061403	0.16805504838372562	1				NaN	NaN	0	NaN	1006	2929	3936
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3938	16.917	NaN	1639.9	30	0	394.89	0.042				-1	MVDLMKRCWDQ	11	27	749.3373729232611	1496.6601929133221	2	749.8396606445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))VDLMKRC(Carbamidomethyl (C))WDQ_	ENSG00000170209|ENST00000303941|ANKK1	14.137123925751023	0.8042936413770803	1				NaN	NaN	0	NaN	1007	2929	3936
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3945	16.935	NaN	12487	30	0	4546.3	0.214	+			38765	SSLSTEAS	8	51	391.1822565908211	780.3499602484422	2	391.18231201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSLSTEAS_	nc|ENSG00000229809|P0C7X2-5|ZNF688	25.450171626174864	0.7628259754767981	1				NaN	NaN	0	NaN	1011	2932	3944
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3946	16.938	NaN	3489.6	30	0	702.78	0.106			+	-1	EFLDAGMGAVD	11	47	570.7489988429161	1139.483444752632	2	570.75	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_EFLDAGM(Oxidation (M))GAVD_	REV__tr|U7T0T7|U7T0T7_FUSNUPutativeK(+)-stimulatedpyrophosphate-energizedsodiumpumpOS=FusobacteriumnucleatumCTI-5OX=1316586GN=hppAPE=3SV=1	36.446750945000026	0.6065623449959539	1				NaN	NaN	0	NaN	1012	2932	3944
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3947	16.94	NaN	5009.9	30	0	1325.9	0.106	+			13729	GQATFQQSK	9	61	497.7510774464899	993.4876019597798	2	497.75103759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GQATFQQSK_	ENST00000429772.6_1_12:48357429-48359073:+|nuORF	117.5257442709337	0.022697614825424036	1				NaN	NaN	0	NaN	1013	2932	3944
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3948	16.942	NaN	3104.5	30	0	877.14	0.106	+			22769	KVFDAKPSAK	10	40	364.2132683141004	1089.6179755425012	3	364.2131042480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KVFDAKPSAK_	ENSG00000143889|ENST00000449105|HNRNPLL;nc|ENSG00000143889|Q8WVV9-4|HNRNPLL;nc|ENSG00000143889|Q8WVV9-5|HNRNPLL	76.16968421966216	0.22691431239609447	1				NaN	NaN	0	NaN	1014	2932	3944
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3949	16.944	NaN	1724.7	30	0	509.36	0.106			+	27748	MQPFAYYR	8	49	538.2531320983743	1074.4917112635485	2	538.2538452148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MQPFAYYR_	REV__ENSG00000130005|ENST00000252288|GAMT	31.954861631926434	0.7126016770032289	1				NaN	NaN	0	NaN	1015	2932	3944
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3950	16.946	NaN	886.59	30	0	196.22	0.034	+			41336	SVLSSGTQAV	10	39	474.7532452829661	947.4919376327322	2	474.75341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVLSSGTQAV_	ENSG00000116455|ENST00000235090|WDR77	24.519189625965996	0.6795976720565101	1				NaN	NaN	0	NaN	1016	2932	3944
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3957	16.964	NaN	2823	30	0	573.36	0.214	+			35152	SAIDKMTKK	9	57	511.28925509638316	1020.5639572595663	2	511.2892761230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAIDKMTKK_	CTNNA1|p.K493Nfs*31|1|0.19|ENSG00000044115|chr5:138917827-138917827|A/-|frameshift_variant;CTNNA1|p.T832*|1|0.29|ENSG00000044115|chr5:138933859-138933862|CAGA/-|frameshift_variant;ENSG00000044115|ENST00000302763|CTNNA1;ENST00000515849.2_1_5:114726864-114727050:-|nuORF;ENST00000517534.5_1_5:138163374-138223382:+|nuORF;nc|ENSG00000044115|P35221-2|CTNNA1	68.84614121027924	0.14577793175421136	1				NaN	NaN	0	NaN	1020	2935	3956
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3958	16.967	NaN	1290.3	30	0	229.98	0.106	+			7174	DAGPPPISR	9	41	455.24303096330317	908.4715089934064	2	455.24285888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DAGPPPISR_	ENSG00000144824|ENST00000431670|PHLDB2;nc|ENSG00000144824|Q86SQ0-2|PHLDB2;nc|ENSG00000144824|Q86SQ0-3|PHLDB2;PHLDB2|p.K1064Nfs*28|1|0.29|ENSG00000144824|chr3:111967696-111967696|A/-|frameshift_variant;PHLDB2|p.K665Rfs*6|1|0.22|ENSG00000144824|chr3:111920409-111920409|A/-|frameshift_variant;PHLDB2|p.P552Hfs*18|1|0.06|ENSG00000144824|chr3:111913637-111913638|-/AT|frameshift_variant;PHLDB2|p.S734Ifs*5|1|0.07|ENSG00000144824|chr3:111939544-111939545|-/TAACT|frameshift_variant;PHLDB2|p.V822Lfs*6|1|0.1|ENSG00000144824|chr3:111945316-111945316|G/-|frameshift_variant	44.377184641726394	0.36891676396732553	1				NaN	NaN	0	NaN	1021	2935	3956
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3959	16.969	NaN	1705.1	30	0	236.26	0.106	+			28655	NLKYSSSLAA	10	47	527.2814406375905	1052.548328341981	2	527.78369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NLKYSSSLAA_	ADAD1|p.Y227N|1|0.16|ENSG00000164113|chr4:122396332-122396332|T/A|missense_variant	49.44154591367651	0.46214596422418036	1				NaN	NaN	0	NaN	1022	2935	3956
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3960	16.971	NaN	1440.9	30	0	409.72	0.036			+	20851	KILGQCVPIK	10	33	549.8403635662651	1097.66617419933	2	549.8402709960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KILGQCVPIK_	REV__tr|U7SYI2|U7SYI2_FUSNUTypeIVsecretionsystemproteinVirB3OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00889PE=4SV=1	20.94693142431847	0.7087701759873708	1				NaN	NaN	0	NaN	1023	2935	3956
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3968	16.991	NaN	6906.3	30	0	1224.8	0.214	+			12770	GELNSRLSS	9	62	481.74831644523675	961.4820799572735	2	481.74835205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GELNSRLSS_	ENSG00000204267|ENST00000374897|TAP2;nc|ENSG00000204267|Q03519-2|TAP2;TAP2|p.K532Sfs*29|1|0.43|ENSG00000204267|chr6:32830307-32830307|T/-|frameshift_variant;TAP2|p.Q330Rfs*50|1|0.33|ENSG00000204267|chr6:32832783-32832783|C/-|frameshift_variant;TAP2|p.V467Lfs*2|1|0.15|ENSG00000204267|chr6:32830680-32830680|C/-|frameshift_variant	87.69643885390035	0.07135982304947239	1				NaN	NaN	0	NaN	1028	2938	3967
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3969	16.994	NaN	2179	30	0	230.04	0.106	+			35545	SAVQYCHQK	9	60	532.2536953281194	1062.4928377230387	2	532.2539672851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAVQYCHQK_	ENSG00000072518|ENST00000402010|MARK2;ENSG00000075413|ENST00000429436|MARK3;ENSG00000116141|ENST00000366917|MARK1;ENST00000558223.5_1_14:103852366-103932133:+|nuORF;MARK1|p.H180Qfs*3|1|0.18|ENSG00000116141|chr1:220615981-220615982|-/A|frameshift_variant;MARK2|p.K225Nfs*12|1|0.39|ENSG00000072518|chr11:63900012-63900012|A/-|frameshift_variant;MARK2|p.Q563Sfs*53|1|0.41|ENSG00000072518|chr11:63904791-63904791|C/-|frameshift_variant;MARK2|p.T549Rfs*67|2|0.4|ENSG00000072518|chr11:63904110-63904110|C/-|frameshift_variant;MARK3|p.A425Sfs*19|1|0.22|ENSG00000075413|chr14:103474997-103474998|-/C|frameshift_variant;nc|ENSG00000072518|Q7KZI7-10|MARK2;nc|ENSG00000072518|Q7KZI7-11|MARK2;nc|ENSG00000072518|Q7KZI7-12|MARK2;nc|ENSG00000072518|Q7KZI7-13|MARK2;nc|ENSG00000072518|Q7KZI7-14|MARK2;nc|ENSG00000072518|Q7KZI7-15|MARK2;nc|ENSG00000072518|Q7KZI7-16|MARK2;nc|ENSG00000072518|Q7KZI7-2|MARK2;nc|ENSG00000072518|Q7KZI7-3|MARK2;nc|ENSG00000072518|Q7KZI7-4|MARK2;nc|ENSG00000072518|Q7KZI7-5|MARK2;nc|ENSG00000072518|Q7KZI7-6|MARK2;nc|ENSG00000072518|Q7KZI7-7|MARK2;nc|ENSG00000072518|Q7KZI7-8|MARK2;nc|ENSG00000072518|Q7KZI7-9|MARK2;nc|ENSG00000075413|P27448-2|MARK3;nc|ENSG00000075413|P27448-3|MARK3;nc|ENSG00000075413|P27448-4|MARK3;nc|ENSG00000075413|P27448-6|MARK3;nc|ENSG00000075413|P27448-7|MARK3;nc|ENSG00000075413|P27448-8|MARK3;nc|ENSG00000116141|Q9P0L2-2|MARK1;nc|ENSG00000116141|Q9P0L2-3|MARK1	67.49366992349736	0.1516260258713357	1				NaN	NaN	0	NaN	1029	2938	3967
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3970	16.996	NaN	3870.8	30	0	601.37	0.106				-1	ENTMCAKF	8	57	508.7135463579434	1015.4125397826868	2	508.7139892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_ENTM(Oxidation (M))C(Carbamidomethyl (C))AKF_	ENSG00000166947|ENST00000441366|EPB42;ENST00000567019.1_1_15:43489502-43501706:-|nuORF;EPB42|p.C670Sfs*10|1|0.04|ENSG00000166947|chr15:43197369-43197370|-/TATAAAGG|frameshift_variant;nc|ENSG00000166947|P16452-2|EPB42;nc|ENSG00000166947|P16452-3|EPB42	44.116797842482775	0.6307669463330267	1				NaN	NaN	0	NaN	1030	2938	3967
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3971	16.998	NaN	1333.6	30	0	220.42	0.106	+			51111	YLYNDCPG	8	41	472.69509979516147	943.375646657123	2	472.6946105957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YLYNDCPG_	ENSG00000067182|ENST00000162749|TNFRSF1A;nc|ENSG00000067182|P19438-4|TNFRSF1A;nc|ENSG00000067182|P19438-5|TNFRSF1A	25.450171626174864	0.7628259754767981	1				NaN	NaN	0	NaN	1031	2938	3967
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3972	17	NaN	1716.1	30	0	289.48	0.106	+			46240	VEDGGHGVEG	10	40	478.209073405014	954.403593876828	2	478.20892333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VEDGGHGVEG_	ENST00000587947.5_1_19:38880764-38880967:+|nuORF	40.77816245573522	0.5419747034533848	1				NaN	NaN	0	NaN	1032	2938	3967
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3973	17.002	NaN	1426.1	30	0	290.13	0.038			+	5730	AVFQKDKQDL	10	44	596.3201769950966	1190.6258010569932	2	596.3201904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AVFQKDKQDL_	REV__ENSG00000197157|ENST00000354725|SND1;REV__GAS2L3-SND1|1|fusion;REV__SND1|p.A514Qfs*156|1|0.37|ENSG00000197157|chr7:127929195-127929195|A/-|frameshift_variant	27.047317107675042	0.6589519614906109	1				NaN	NaN	0	NaN	1033	2938	3967
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3978	17.016	NaN	3652.3	30	0	970.07	0.214			+	13350	GKTFKMYH	8	41	506.2561950006531	1010.4978370681063	2	506.25634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GKTFKMYH_	REV__ENSG00000254093|ENST00000314787|PINX1;REV__nc|ENSG00000171056|Q9BT81-2|SOX7;REV__nc|ENSG00000258724|Q96BK5-2|PINX1	18.324413293986947	0.7971860551947066	1				NaN	NaN	0	NaN	1035	2941	3977
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3979	17.02	NaN	3007.1	30	0	292.53	0.106	+			42447	TAMAAAKAPTK	11	64	530.7940814515731	1059.5736099699461	2	530.79443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAMAAAKAPTK_	ENSG00000114391|ENST00000394077|RPL24	94.53808932780436	0.0801970019496807	1				NaN	NaN	0	NaN	1036	2941	3977
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3980	17.022	NaN	1457.8	30	0	159.66	0.106			+	7894	DRTLVGPQR	9	42	521.294677734375	NaN	0	521.294677734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DRTLVGPQR_	REV__ENSG00000142511|ENST00000270590|GPR32	29.170058357718403	0.3302935627494407	1				NaN	NaN	0	NaN	1037	2941	3977
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3981	17.024	NaN	1399.3	30	0	292.97	0.106	+			49242	VVNPKYEGK	9	50	345.1938649978147	1032.5597655936442	3	345.19384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVNPKYEGK_	ENSG00000150093|ENST00000302278|ITGB1	65.80317337860623	0.1652391959156183	1				NaN	NaN	0	NaN	1038	2941	3977
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3982	17.025	NaN	906.53	30	0	215.12	0.106			+	13648	GMQRHQET	8	24	493.7271883180706	985.4398237029412	2	493.7272644042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GMQRHQET_	REV__ENSG00000115457|ENST00000233809|IGFBP2;REV__ENST00000490362.1_1_2:217498183-217525611:+|nuORF	12.959181472943097	0.7887000251064199	1				NaN	NaN	0	NaN	1039	2941	3977
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3983	17.027	NaN	898.57	30	0	273.61	0.106			+	47568	VRGGACPN	8	16	387.1897508205641	772.3649487079282	2	387.1893615722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VRGGACPN_	REV__ENST00000356836.10_1_1:44445588-44445732:+|nuORF	8.822329726475273	0.7821568878176242	1				NaN	NaN	0	NaN	1040	2941	3977
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3984	17.029	NaN	2017.3	30	0	335.95	0.036	+			8520	EATQDDYVL	9	43	527.2412005007034	NaN	0	526.77294921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EATQDDYVL_	ENSG00000106278|ENST00000393386|PTPRZ1;ENSG00000144724|ENST00000474889|PTPRG;ENST00000475012.5_1_3:62203523-62278979:+|nuORF;nc|ENSG00000106278|P23471-2|PTPRZ1;nc|ENSG00000106278|P23471-3|PTPRZ1;nc|ENSG00000144724|P23470-2|PTPRG;PTPRG|p.Q1315Sfs*12|1|0.24|ENSG00000144724|chr3:62282754-62282754|T/-|frameshift_variant	25.450171626174864	0.34907449758287085	1				NaN	NaN	0	NaN	1041	2941	3977
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3988	17.043	NaN	15032	30	0	2546	0.214				-1	 	0	71	466.28206501622975	930.5495770992595	2	466.28192138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	1042	2944	3987
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3989	17.047	NaN	3713	30	0	451.91	0.106	+			39427	STDVSHCVK	9	56	488.2316698713165	974.448786809433	2	488.23175048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STDVSHCVK_	ENSG00000166750|ENST00000299977|SLFN5;nc|ENSG00000166750|Q08AF3-2|SLFN5;SLFN5|p.P698Lfs*21|1|0.46|ENSG00000166750|chr17:35265300-35265300|C/-|frameshift_variant;SLFN5|p.Q524Sfs*11|1|0.73|ENSG00000166750|chr17:35264609-35264609|C/-|frameshift_variant	87.69643885390035	0.07135982304947239	1				NaN	NaN	0	NaN	1043	2944	3987
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3990	17.049	NaN	2723.4	30	0	1189	0.106	+			48317	VTFGTKSRV	9	38	332.19407963418803	993.5604095027641	3	332.1944885253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTFGTKSRV_	ENSG00000059573|ENST00000371224|ALDH18A1;nc|ENSG00000059573|P54886-2|ALDH18A1	18.324413293986947	0.6112419832031293	1				NaN	NaN	0	NaN	1044	2944	3987
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3991	17.05	NaN	4464	30	0	1040.3	0.106			+	22159	KSRTVMPH	8	55	478.26117371039686	954.5077944875937	2	478.2611999511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KSRTVMPH_	REV__sp|F5HCM1|VIE1_HCMVMImmediateearlyproteinIE1OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL123PE=3SV=1;REV__sp|P13202|VIE1_HCMVAImmediateearlyproteinIE1OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL123PE=1SV=1	38.80614096846853	0.6637206697844082	1				NaN	NaN	0	NaN	1045	2944	3987
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3992	17.052	NaN	2058.2	30	0	323.12	0.106	+			49243	VVNPKYEGK	9	45	517.287657540456	1032.560762147712	2	517.2877807617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVNPKYEGK_	ENSG00000150093|ENST00000302278|ITGB1	64.20726635412375	0.17854274437659667	1				NaN	NaN	0	NaN	1046	2944	3987
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3993	17.054	NaN	676.67	30	0	218.82	0.106			+	37771	SLVSVLKVIE	10	30	362.8962518864936	1085.6669262596808	3	362.8966369628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLVSVLKVIE_	REV__DNAH5|p.F4486Lfs*7|2|0.23|ENSG00000039139|chr5:13701317-13701317|A/-|frameshift_variant;REV__DNAH5|p.G1976Efs*78|3|0.44|ENSG00000039139|chr5:13830731-13830731|C/-|frameshift_variant;REV__DNAH5|p.I1855Sfs*16|1|0.33|ENSG00000039139|chr5:13841052-13841052|T/-|frameshift_variant;REV__DNAH5|p.I2945Rfs*76|1|0.07|ENSG00000039139|chr5:13780948-13780949|-/CATTTCTCTT|frameshift_variant;REV__DNAH5|p.I4068*|1|0.07|ENSG00000039139|chr5:13721077-13721077|T/-|frameshift_variant;REV__DNAH5|p.L1467Wfs*3|1|0.23|ENSG00000039139|chr5:13864593-13864593|A/-|frameshift_variant;REV__DNAH5|p.P3316Lfs*22|3|0.33|ENSG00000039139|chr5:13766130-13766130|G/-|frameshift_variant;REV__ENSG00000039139|ENST00000265104|DNAH5	28.081489160057373	0.6505064946289502	1				NaN	NaN	0	NaN	1047	2944	3987
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	3994	17.056	NaN	792.14	30	0	184.48	0.034				-1	LAGMCLLAL	9	35	460.75129130324524	NaN	0	460.75042724609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_LAGM(Oxidation (M))CLLAL_	ENST00000374259.7_1_X:70316267-70316345:+|nuORF	29.841539824830324	0.32690339240668626	1				NaN	NaN	0	NaN	1048	2944	3987
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4003	17.077	NaN	9594.6	30	0	1254.3	0.214			+	5117	ATSSALLRGA	10	77	473.76910185963135	945.5236507860627	2	473.76922607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSSALLRGA_	REV__ENSG00000088827|ENST00000344754|SIGLEC1;REV__nc|ENSG00000088827|Q9BZZ2-2|SIGLEC1;REV__nc|ENSG00000088827|Q9BZZ2-3|SIGLEC1	90.36981228632155	0.12895663264417576	1				NaN	NaN	0	NaN	1054	2947	4002
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4004	17.081	NaN	10572	30	0	1793.9	0.106	+			35006	SACHKYFEK	9	70	585.273872728873	1168.533192524546	2	585.2743530273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SAC(Carbamidomethyl (C))HKYFEK_	ENSG00000163993|ENST00000296370|S100P;ENST00000513778.1_1_4:6695618-6698766:+|nuORF;S100P|p.T82M|1|0.3|ENSG00000163993|chr4:6696999-6696999|C/T|missense_variant	98.58198989935565	0.04066992115528678	1				NaN	NaN	0	NaN	1055	2947	4002
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4005	17.083	NaN	2979.9	30	0	586.89	0.106			+	-1	CMIEAAQSQ	9	15	519.2243558428908	1036.4341587525814	2	519.2242431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_C(Carbamidomethyl (C))MIEAAQSQ_	REV__ENSG00000162302|ENST00000334205|RPS6KA4;REV__nc|ENSG00000162302|O75676-2|RPS6KA4	17.364965105453717	0.6112419832031293	1				NaN	NaN	0	NaN	1056	2947	4002
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4006	17.085	NaN	2076.8	30	0	507.01	0.106			+	26765	LVQDGRMRHWR	11	45	485.2559235121977	NaN	0	485.2559814453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LVQDGRMRHWR_	REV__ENSG00000137411|ENST00000676266|VARS2;REV__ENST00000477288.5_1_6:30882610-30884901:+|nuORF;REV__nc|ENSG00000137411|Q5ST30-3|VARS2;REV__nc|ENSG00000137411|Q5ST30-4|VARS2	26.749707702089633	0.4462038980881566	1				NaN	NaN	0	NaN	1057	2947	4002
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4007	17.087	NaN	2090.5	30	0	821.61	0.106			+	10073	ESIFFQVD	8	30	492.7386784231145	983.462803913029	2	492.7383117675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ESIFFQVD_	REV__DST|p.K5076Nfs*24|1|0.31|ENSG00000151914|chr6:56472218-56472218|T/-|frameshift_variant;REV__DST|p.T4428Nfs*23|1|0.12|ENSG00000151914|chr6:56497896-56497897|-/T|frameshift_variant;REV__ENSG00000151914|ENST00000680361|DST;REV__nc|ENSG00000151914|Q03001|DST	17.364965105453717	0.7956685240855921	1				NaN	NaN	0	NaN	1058	2947	4002
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4008	17.088	NaN	3885.4	30	0	1031.4	0.106			+	13523	GLQRGLLEL	9	57	499.8033839485793	997.5922149639587	2	499.80352783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GLQRGLLEL_	REV__ENSG00000162437|ENST00000294428|RAVER2;REV__nc|ENSG00000162437|Q9HCJ3-2|RAVER2	40.77816245573522	0.41113185337114944	1				NaN	NaN	0	NaN	1059	2947	4002
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4009	17.09	NaN	2134.9	30	0	378.35	0.035			+	21617	KPNSQDGGEV	10	39	515.745871659489	1029.477190385778	2	515.7432861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KPNSQDGGEV_	REV__ENSG00000070814|ENST00000643257|TCOF1;REV__nc|ENSG00000070814|Q13428-2|TCOF1;REV__nc|ENSG00000070814|Q13428-4|TCOF1;REV__nc|ENSG00000070814|Q13428-6|TCOF1;REV__nc|ENSG00000070814|Q13428-7|TCOF1;REV__nc|ENSG00000070814|Q13428-8|TCOF1;REV__nc|ENSG00000070814|Q13428|TCOF1	16.71738777980365	0.7315012293134124	1				NaN	NaN	0	NaN	1060	2947	4002
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4019	17.114	NaN	4716.1	30	0	1520.4	0.215	+			9406	EKGKEIAAK	9	57	487.28726181822776	972.5599707032555	2	487.2872314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EKGKEIAAK_	ENSG00000138688|ENST00000679879|BLTP1;ENST00000470182.1_1_4:123167396-123168562:+|nuORF;KIAA1109-FSIP2|1|fusion;nc|ENSG00000138688|Q2LD37-2|BLTP1;nc|ENSG00000138688|Q2LD37-4|BLTP1;nc|ENSG00000138688|Q2LD37-6|BLTP1;nc|ENSG00000138688|Q2LD37-7|BLTP1;nc|ENSG00000138688|Q2LD37|BLTP1	49.536043120802724	0.308405419312776	1				NaN	NaN	0	NaN	1067	2950	4018
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4020	17.117	NaN	2795	30	0	581.67	0.106			+	6771	CESFVASSS	9	55	458.68941432388004	915.3642757145601	2	458.6893310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_CESFVASSS_	REV__ENSG00000165406|ENST00000453424|MARCHF8	29.14955571784316	0.5308295550522326	1				NaN	NaN	0	NaN	1068	2950	4018
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4021	17.119	NaN	4921.5	30	0	1026.3	0.106	+			40771	SVDLPKHAK	9	70	497.78754598907534	993.5605390449507	2	497.7873229980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVDLPKHAK_	ENSG00000095203|ENST00000374566|EPB41L4B;nc|ENSG00000095203|Q9H329-2|EPB41L4B	98.62937762414208	0.04060045538121712	1				NaN	NaN	0	NaN	1069	2950	4018
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4022	17.121	NaN	3355.4	30	0	684.36	0.106			+	-1	YDGDMDMHME	10	24	646.2020263671875	NaN	0	646.2020263671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	3 Oxidation (M)	_YDGDM(Oxidation (M))DM(Oxidation (M))HM(Oxidation (M))E_	REV__ENSG00000173801|ENST00000393931|JUP	3.4100154012096215	0.4201028297492154	1				NaN	NaN	0	NaN	1070	2950	4018
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4023	17.123	NaN	2440.7	30	0	516.5	0.106			+	9961	ERELERKL	8	44	536.8089599609375	NaN	0	536.8089599609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ERELERKL_	REV__CCPG1|p.K422Rfs*3|1|0.21|ENSG00000260916|chr15:55360508-55360508|T/-|frameshift_variant;REV__CCPG1|p.K524Nfs*118|1|0.26|ENSG00000260916|chr15:55360201-55360201|T/-|frameshift_variant;REV__ENSG00000260916|ENST00000442196|CCPG1;REV__ENST00000568372.5_1_15:55651699-55664264:-|nuORF;REV__nc|ENSG00000260916|Q9ULG6-2|CCPG1;REV__nc|ENSG00000260916|Q9ULG6-4|CCPG1;REV__nc|ENSG00000260916|Q9ULG6|CCPG1	32.81241826257853	1.7418937515398478	1				NaN	NaN	0	NaN	1071	2950	4018
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4024	17.125	NaN	1741.2	30	0	351.28	0.106			+	21913	KRSYKKEL	8	42	526.3167415749039	1050.6189302166076	2	526.231689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KRSYKKEL_	REV__ENSG00000174233|ENST00000357869|ADCY6;REV__ENST00000552090.1_1_12:49167835-49170266:-|nuORF;REV__nc|ENSG00000174233|O43306-2|ADCY6	22.579656572578934	0.7849899225207307	1				NaN	NaN	0	NaN	1072	2950	4018
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4025	17.126	NaN	1716.1	30	0	571.83	0.035			+	32052	QRVHIISLG	9	43	511.80816650390625	NaN	0	511.80816650390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QRVHIISLG_	REV__ENSG00000256294|ENST00000262894|ZNF225	23.04248740728303	0.3589936788096251	1				NaN	NaN	0	NaN	1073	2950	4018
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4033	17.146	NaN	6081.5	30	0	895.94	0.215	+			3643	ASYENVRAK	9	68	519.2726731889801	1036.53079344476	2	519.2728881835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASYENVRAK_	ENSG00000128340|ENST00000249071|RAC2	99.01295224348159	0.040209060045561164	1				NaN	NaN	0	NaN	1078	2953	4032
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4034	17.15	NaN	2104.4	30	0	718.34	0.106			+	7604	DKAQQLAAQ	9	48	486.75889124024206	971.5032295472841	2	486.7589416503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DKAQQLAAQ_	REV__CON__P12035;REV__ENSG00000186442|ENST00000417996|KRT3	32.81241826257853	0.4965981579233955	1				NaN	NaN	0	NaN	1079	2953	4032
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4035	17.152	NaN	823.68	30	0	92.83	0.106				-1	 	0	36	400.7133299260903	799.4121069189806	2	400.71319580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	1080	2953	4032
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4036	17.153	NaN	3282.5	30	0	385.24	0.106	+			5943	AVLKHIENK	9	66	526.3167415749039	1050.6189302166076	2	526.316162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVLKHIENK_	ENSG00000160695|ENST00000621676|VPS11;nc|ENSG00000160695|Q9H270|VPS11	91.26522074875469	0.06129826844580791	1				NaN	NaN	0	NaN	1081	2953	4032
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4037	17.155	NaN	2154.9	30	0	495.52	0.106	+			22403	KTISTNLLR	9	53	523.3221416822603	1044.6297304313205	2	523.322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KTISTNLLR_	ENST00000540418.5_1_12:68690747-68696570:-|nuORF	62.107414245175825	0.1960472003779324	1				NaN	NaN	0	NaN	1082	2953	4032
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4038	17.157	NaN	876.03	30	0	236.36	0.106			+	39452	STENKSIK	8	34	453.74806779638806	NaN	0	453.7481994628906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STENKSIK_	REV__ENSG00000165338|ENST00000298068|HECTD2	26.69291269510374	1.7418937515398478	1				NaN	NaN	0	NaN	1083	2953	4032
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4039	17.159	NaN	1448.8	30	0	161.96	0.036	+			38307	SRAPPGLRFL	10	39	557.3309648450582	1112.6473767569164	2	557.3319091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SRAPPGLRFL_	ENST00000497639.5_1_10:69644980-69647288:+|nuORF	19.996771675451527	0.7148376616046445	1				NaN	NaN	0	NaN	1084	2953	4032
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4046	17.177	NaN	2983	30	0	433.65	0.214	+			20991	KKGEFGQK	8	53	461.26143168399864	920.5083104347973	2	461.2611083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KKGEFGQK_	ENST00000417154.5_1_2:191777940-191778024:+|nuORF	74.25504064058377	0.37144338840759816	1				NaN	NaN	0	NaN	1088	2956	4045
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4047	17.18	NaN	2515.5	30	0	834.24	0.106	+			5944	AVLKHIENK	9	41	351.2134384206412	1050.6184858621236	3	351.2134704589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVLKHIENK_	ENSG00000160695|ENST00000621676|VPS11;nc|ENSG00000160695|Q9H270|VPS11	52.936696900407355	0.27249468807391813	1				NaN	NaN	0	NaN	1089	2956	4045
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4048	17.182	NaN	4013	30	0	580.62	0.106	+			2848	ASALGSSSYKK	11	65	549.7934190572364	1097.5722851812727	2	549.7941284179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASALGSSSYKK_	ENSG00000122965|ENST00000261741|RBM19;RBM19|p.F841Sfs*18|1|0.28|ENSG00000122965|chr12:113915007-113915007|G/-|frameshift_variant	84.81729255234993	0.11999117121320589	1				NaN	NaN	0	NaN	1090	2956	4045
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4049	17.184	NaN	3373	30	0	502.89	0.106	+			19434	KAQFLNGKAK	10	50	368.8890084832406	1103.6451960499219	3	368.8890075683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KAQFLNGKAK_	ENSG00000198718|ENST00000361462|TOGARAM1;nc|ENSG00000198718|Q9Y4F4|TOGARAM1	49.536043120802724	0.461275219792494	1				NaN	NaN	0	NaN	1091	2956	4045
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4050	17.186	NaN	2463.4	30	0	273.62	0.106	+			12282	GAYDGKYEK	9	58	515.745871659489	1029.477190385778	2	516.2481079101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GAYDGKYEK_	ENSG00000196981|ENST00000330689|WDR5B;WDR5B|p.P136Efs*12|1|0.03|ENSG00000196981|chr3:122415124-122415125|-/CTCT|frameshift_variant	58.22992032128504	0.22837015374068087	1				NaN	NaN	0	NaN	1092	2956	4045
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4051	17.188	NaN	720.36	30	0	64.255	0.106				-1	IYKECLSI	8	30	342.51704624763795	1024.529309343114	3	342.517333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_IYKEC(Carbamidomethyl (C))LSI_	ENSG00000155158|ENST00000512701|TTC39B;ENST00000505732.5_1_9:15186859-15307321:-|nuORF;nc|ENSG00000155158|Q5VTQ0-2|TTC39B;nc|ENSG00000155158|Q5VTQ0-3|TTC39B;nc|ENSG00000155158|Q5VTQ0-4|TTC39B;nc|ENSG00000155158|Q5VTQ0-5|TTC39B;nc|ENSG00000155158|Q5VTQ0-6|TTC39B;nc|ENSG00000155158|Q5VTQ0|TTC39B	17.364965105453717	0.7956685240855921	1				NaN	NaN	0	NaN	1093	2956	4045
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4052	17.19	NaN	1126.8	30	0	184.74	0.036				-1	EEADTEMPGL	10	38	554.2308850922695	1106.447217251339	2	554.231689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_EEADTEM(Oxidation (M))PGL_	ENST00000575672.1_1_16:4307734-4307863:-|nuORF	16.473147378115264	0.7327422906225664	1				NaN	NaN	0	NaN	1094	2956	4045
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4060	17.208	NaN	6654.6	30	0	2461.8	0.214	+			36393	SETKNANSL	9	65	482.24043027607144	962.4663076189429	2	482.24053955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SETKNANSL_	ENSG00000137673|ENST00000260227|MMP7;ENST00000531200.1_1_11:102398162-102401431:-|nuORF;ENST00000533366.5_1_11:102395628-102401431:-|nuORF	80.45461616416974	0.09558281504443908	1				NaN	NaN	0	NaN	1099	2959	4059
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4061	17.211	NaN	8692.3	30	0	1617	0.106	+			14459	GTCASWRGK	9	76	511.7456082238807	1021.4766635145614	2	511.7462463378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GTC(Carbamidomethyl (C))ASWRGK_	ENSG00000265972|ENST00000582401|TXNIP;ENST00000488537.1_1_1:145440216-145440639:+|nuORF;nc|ENSG00000265972|Q9H3M7-2|TXNIP	115.49404669440601	0.023927554121326553	1				NaN	NaN	0	NaN	1100	2959	4059
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4062	17.213	NaN	727.74	30	0	168.64	0.106	+			11085	FEVLKQQKEI	10	32	421.243169828931	NaN	0	421.2432556152344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FEVLKQQKEI_	ARFGEF1|p.F1680Lfs*8|1|0.29|ENSG00000066777|chr8:67203171-67203171|A/-|frameshift_variant;ARFGEF1|p.K888Rfs*10|1|0.36|ENSG00000066777|chr8:67253485-67253486|TT/-|frameshift_variant;ENSG00000066777|ENST00000262215|ARFGEF1	19.996771675451527	0.4201028297492154	1				NaN	NaN	0	NaN	1101	2959	4059
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4063	17.215	NaN	1159.8	30	0	379.34	0.106	+			20743	KGVAGLLQRF	10	32	544.8320676623434	1087.6495823914868	2	544.8323974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KGVAGLLQRF_	ENSG00000167011|ENST00000300303|NAT16	26.063383197487333	0.6669871633831898	1				NaN	NaN	0	NaN	1102	2959	4059
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4064	17.217	NaN	1098	30	0	118.21	0.106	+			15533	GVDGSVYKK	9	41	476.7585002344721	951.5024475357442	2	476.7588195800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GVDGSVYKK_	ENSG00000159399|ENST00000290573|HK2;ENST00000447818.2_1_X:79828255-79829731:-|nuORF	45.97224482568171	0.3502073465782774	1				NaN	NaN	0	NaN	1103	2959	4059
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4065	17.219	NaN	890.43	30	0	292.2	0.106			+	24389	LFVFVFSVW	9	29	381.880859375	NaN	0	381.880859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LFVFVFSVW_	REV__ENSG00000111886|ENST00000402938|GABRR2;REV__ENSG00000146276|ENST00000454853|GABRR1;REV__nc|ENSG00000111886|P28476-2|GABRR2;REV__nc|ENSG00000146276|P24046-2|GABRR1;REV__nc|ENSG00000146276|P24046-3|GABRR1	29.14955571784316	0.3303970763161698	1				NaN	NaN	0	NaN	1104	2959	4059
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4066	17.221	NaN	614.93	30	0	109.19	0.032	+			5770	AVGPHLSK	8	31	404.7375296548436	NaN	0	404.7374572753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AVGPHLSK_	ENSG00000144671|ENST00000448498|SLC22A14;ENST00000496724.1_1_3:38347478-38348849:+|nuORF;SLC22A14|p.A280Rfs*13|1|0.08|ENSG00000144671|chr3:38309015-38309016|-/CGGGACACTGCTTTTTT|frameshift_variant;SLC22A14|p.T508Hfs*73|1|0.1|ENSG00000144671|chr3:38315696-38315697|-/C|frameshift_variant	21.9598887501803	1.7418937515398478	1				NaN	NaN	0	NaN	1105	2959	4059
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4075	17.242	NaN	4974.5	30	0	886.97	0.214	+			49142	VVMADPKGK	9	58	472.76516761978417	943.5157823063684	2	472.764892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVMADPKGK_	ENSG00000137038|ENST00000358227|DMAC1;ENST00000469050.1_1_9:7798575-7833931:-|nuORF;ENST00000484082.1_1_9:7798575-7800059:-|nuORF;nc|ENSG00000137038|Q96GE9|DMAC1	69.6276240434122	0.14239879520340665	1				NaN	NaN	0	NaN	1111	2962	4074
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4076	17.246	NaN	2455.8	30	0	212.19	0.106	+			45243	TVQEKTFNK	9	52	547.7956737758342	1093.5767946184683	2	547.796142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVQEKTFNK_	ENSG00000163104|ENST00000354268|SMARCAD1;nc|ENSG00000163104|Q9H4L7-2|SMARCAD1;SMARCAD1|p.K230Rfs*28|1|0.26|ENSG00000163104|chr4:94240985-94240985|A/-|frameshift_variant;SMARCAD1|p.K734Qfs*6|1|0.31|ENSG00000163104|chr4:94278630-94278631|-/C|frameshift_variant	75.04331003522576	0.118981335847003	1				NaN	NaN	0	NaN	1112	2962	4074
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4077	17.248	NaN	2330.5	30	0	263.92	0.106			+	21097	KKPTLGFPLV	10	53	550.3454160105307	1098.6762790878613	2	550.3460083007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KKPTLGFPLV_	REV__ENSG00000131504|ENST00000389054|DIAPH1;REV__nc|ENSG00000131504|O60610-2|DIAPH1;REV__nc|ENSG00000131504|O60610-3|DIAPH1	53.08895987439943	0.42869529153390606	1				NaN	NaN	0	NaN	1113	2962	4074
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4078	17.249	NaN	1975.3	30	0	416.1	0.106	+			12353	GDPAARRRLSP	11	40	598.3379551635696	1194.6613573939392	2	598.338134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GDPAARRRLSP_	ENST00000402693.4_1_19:1555279-1555546:-|nuORF	20.31501182869353	0.7753667161465326	1				NaN	NaN	0	NaN	1114	2962	4074
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4079	17.251	NaN	5305.9	30	0	1048.4	0.106	+			4255	ATGESIAVKK	10	68	502.29269631055445	1002.5708396879089	2	502.7944641113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATGESIAVKK_	DCLRE1C|p.R685Efs*6|1|0.37|ENSG00000152457|chr10:14908434-14908434|T/-|frameshift_variant;ENSG00000152457|ENST00000378278|DCLRE1C;nc|ENSG00000152457|Q96SD1-2|DCLRE1C;nc|ENSG00000152457|Q96SD1-3|DCLRE1C	99.78786539795823	0.07832680346773438	1				NaN	NaN	0	NaN	1115	2962	4074
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4080	17.253	NaN	2583.4	30	0	575.61	0.036				-1	EMGRAALAIK	10	49	538.2981756120304	1074.5817982908607	2	538.299072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_EM(Oxidation (M))GRAALAIK_	ENSG00000176428|ENST00000324941|VPS37D	45.97224482568171	0.49411383603842696	1				NaN	NaN	0	NaN	1116	2962	4074
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4088	17.273	NaN	2426.4	30	0	685.12	0.214			+	20542	KFLGHKQNR	9	38	564.3263356256855	1126.6381183181709	2	564.3265991210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KFLGHKQNR_	REV__ENSG00000165973|ENST00000357134|NELL1;REV__nc|ENSG00000165973|Q92832-2|NELL1	19.1035232394073	0.6112419832031293	1				NaN	NaN	0	NaN	1121	2965	4087
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4089	17.276	NaN	2964.9	30	0	490.44	0.106	+			44792	TTQRPLHINK	10	59	604.3492878971862	1206.6840228611723	2	604.3490600585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTQRPLHINK_	CACNA1C|p.A2072Pfs*18|1|0.55|ENSG00000151067|chr12:2688729-2688729|G/-|frameshift_variant;CACNA1C|p.P2073Qfs*17|1|0.21|ENSG00000151067|chr12:2688733-2688733|C/-|frameshift_variant;ENSG00000151067|ENST00000399655|CACNA1C;nc|ENSG00000151067|Q13936-10|CACNA1C;nc|ENSG00000151067|Q13936-11|CACNA1C;nc|ENSG00000151067|Q13936-13|CACNA1C;nc|ENSG00000151067|Q13936-14|CACNA1C;nc|ENSG00000151067|Q13936-15|CACNA1C;nc|ENSG00000151067|Q13936-16|CACNA1C;nc|ENSG00000151067|Q13936-17|CACNA1C;nc|ENSG00000151067|Q13936-18|CACNA1C;nc|ENSG00000151067|Q13936-19|CACNA1C;nc|ENSG00000151067|Q13936-2|CACNA1C;nc|ENSG00000151067|Q13936-20|CACNA1C;nc|ENSG00000151067|Q13936-21|CACNA1C;nc|ENSG00000151067|Q13936-22|CACNA1C;nc|ENSG00000151067|Q13936-23|CACNA1C;nc|ENSG00000151067|Q13936-24|CACNA1C;nc|ENSG00000151067|Q13936-25|CACNA1C;nc|ENSG00000151067|Q13936-26|CACNA1C;nc|ENSG00000151067|Q13936-27|CACNA1C;nc|ENSG00000151067|Q13936-28|CACNA1C;nc|ENSG00000151067|Q13936-29|CACNA1C;nc|ENSG00000151067|Q13936-3|CACNA1C;nc|ENSG00000151067|Q13936-30|CACNA1C;nc|ENSG00000151067|Q13936-31|CACNA1C;nc|ENSG00000151067|Q13936-32|CACNA1C;nc|ENSG00000151067|Q13936-33|CACNA1C;nc|ENSG00000151067|Q13936-34|CACNA1C;nc|ENSG00000151067|Q13936-35|CACNA1C;nc|ENSG00000151067|Q13936-36|CACNA1C;nc|ENSG00000151067|Q13936-37|CACNA1C;nc|ENSG00000151067|Q13936-4|CACNA1C;nc|ENSG00000151067|Q13936-5|CACNA1C;nc|ENSG00000151067|Q13936-6|CACNA1C;nc|ENSG00000151067|Q13936-7|CACNA1C;nc|ENSG00000151067|Q13936-8|CACNA1C;nc|ENSG00000151067|Q13936-9|CACNA1C;nc|ENSG00000151067|Q13936|CACNA1C	84.81729255234993	0.1607459278640679	1				NaN	NaN	0	NaN	1122	2965	4087
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4090	17.278	NaN	1525.7	30	0	270.4	0.106	+			10005	ERNNTRLL	8	57	508.2878538728003	1014.5611548124007	2	508.28765869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ERNNTRLL_	ENSG00000131626|ENST00000253925|PPFIA1;ENSG00000139220|ENST00000549396|PPFIA2;ENSG00000143847|ENST00000295706|PPFIA4;ENSG00000177380|ENST00000334186|PPFIA3;ENST00000421230.6_1_19:49631605-49643027:+|nuORF;ENST00000602716.5_1_19:49631560-49640169:+|nuORF;nc|ENSG00000131626|Q13136-2|PPFIA1;nc|ENSG00000139220|O75334-2|PPFIA2;nc|ENSG00000139220|O75334-3|PPFIA2;nc|ENSG00000139220|O75334-4|PPFIA2;nc|ENSG00000139220|O75334-5|PPFIA2;nc|ENSG00000139220|O75334-6|PPFIA2;nc|ENSG00000143847|O75335|PPFIA4;nc|ENSG00000177380|O75145-2|PPFIA3;PPFIA2|p.F632Lfs*18|1|0.39|ENSG00000139220|chr12:81353217-81353217|A/-|frameshift_variant;PPFIA2|p.H786Lfs*48|1|0.16|ENSG00000139220|chr12:81341113-81341116|GTGA/-|frameshift_variant;PPFIA3|p.A911Rfs*78|1|0.2|ENSG00000177380|chr19:49142984-49142985|-/C|frameshift_variant;PPFIA3|p.S658Pfs*70|1|0.24|ENSG00000177380|chr19:49138317-49138317|C/-|frameshift_variant	32.81241826257853	0.7059802730411993	1				NaN	NaN	0	NaN	1123	2965	4087
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4091	17.28	NaN	909.98	30	0	165.94	0.106	+			39306	STASTVES	8	41	391.1822565908211	780.3499602484422	2	391.18218994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STASTVES_	ENST00000379825.6_2_9:32988108-32989773:-|nuORF	12.959181472943097	0.7887000251064199	1				NaN	NaN	0	NaN	1124	2965	4087
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4092	17.282	NaN	1922.8	30	0	283.35	0.038			+	31090	QFLINPKVTQ	10	48	594.3420213307727	NaN	0	594.3427734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QFLINPKVTQ_	REV__ALMS1|p.L2987Ffs*8|1|0.38|ENSG00000116127|chr2:73490911-73490911|T/-|frameshift_variant;REV__ALMS1|p.S3695Afs*27|1|0.24|ENSG00000116127|chr2:73572954-73572954|A/-|frameshift_variant;REV__ENSG00000116127|ENST00000613296|ALMS1;REV__nc|ENSG00000116127|Q8TCU4-2|ALMS1;REV__nc|ENSG00000116127|Q8TCU4-3|ALMS1	61.76455937419982	0.21986853317854868	1				NaN	NaN	0	NaN	1125	2965	4087
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4101	17.302	NaN	2158	30	0	270.08	0.214	+			44286	TSANVTIRK	9	55	495.2901253911783	NaN	0	495.2902526855469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSANVTIRK_	CKAP2|p.K606Rfs*14|3|0.38|ENSG00000136108|chr13:52474899-52474899|A/-|frameshift_variant;CKAP2|p.R384Gfs*6|1|0.18|ENSG00000136108|chr13:52462405-52462405|A/-|frameshift_variant;CKAP2|p.T295Qfs*14|1|0.12|ENSG00000136108|chr13:52461702-52461702|A/-|frameshift_variant;CKAP2|p.T579Pfs*11|1|0.07|ENSG00000136108|chr13:52474011-52474011|A/-|frameshift_variant;ENSG00000136108|ENST00000258607|CKAP2;nc|ENSG00000136108|Q8WWK9-4|CKAP2;nc|ENSG00000136108|Q8WWK9-6|CKAP2;nc|ENSG00000136108|Q8WWK9|CKAP2	58.2462437865262	0.1567987007793744	1				NaN	NaN	0	NaN	1131	2968	4100
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4102	17.306	NaN	3419.2	30	0	1395.9	0.106			+	13505	GLPGGLLPWP	10	43	336.1942117707433	NaN	0	336.19427490234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GLPGGLLPWP_	REV__ENST00000223095.4_1_7:100780802-100780919:+|nuORF	47.657333605630114	0.3204131577145918	1				NaN	NaN	0	NaN	1132	2968	4100
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4103	17.308	NaN	1269.6	30	0	185.21	0.106	+			24933	LKTLCLEAV	9	42	330.52691253944397	NaN	0	330.190673828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LKTLCLEAV_	PRKDC|p.V2400A|1|0.12|ENSG00000253729|chr8:47849235-47849235|A/G|missense_variant	21.68575002086885	0.36358557434667943	1				NaN	NaN	0	NaN	1133	2968	4100
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4104	17.309	NaN	1692.8	30	0	269.94	0.106				-1	EMQDQSIW	8	56	547.7286445749	1093.4427362166	2	547.7284545898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))EM(Oxidation (M))QDQSIW_	ENSG00000135272|ENST00000393486|MDFIC;MDFIC|p.P65H|1|0.23|ENSG00000135272|chr7:114942374-114942374|C/A|missense_variant;nc|ENSG00000135272|Q9P1T7-1|MDFIC	38.80614096846853	0.6637206697844082	1				NaN	NaN	0	NaN	1134	2968	4100
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4105	17.311	NaN	731.64	30	0	148.94	0.106	+			29897	PLPARPPA	8	29	409.7479592603531	NaN	0	409.74786376953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PLPARPPA_	ENST00000430145.3_1_19:49166463-49183997:+|nuORF	15.63621529709179	1.7418937515398478	1				NaN	NaN	0	NaN	1135	2968	4100
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4106	17.313	NaN	1263	30	0	276.11	0.106			+	50595	YDKAKMLW	8	31	527.7713012695312	NaN	0	527.7713012695312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YDKAKMLW_	REV__ENSG00000176623|ENST00000406452|RMDN1;REV__ENST00000517404.1_1_8:87486539-87487267:-|nuORF;REV__nc|ENSG00000176623|Q96DB5-2|RMDN1;REV__nc|ENSG00000176623|Q96DB5-3|RMDN1	20.481830146152948	1.741893751539848	1				NaN	NaN	0	NaN	1136	2968	4100
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4107	17.315	NaN	1282.1	30	0	159.8	0.033	+			369	AARGDPKR	8	45	435.7469787597656	NaN	0	435.7469787597656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AARGDPKR_	MAN1A1|p.V72Gfs*93|1|0.16|ENSG00000111885|chr6:119348851-119348852|-/C|frameshift_variant	29.14955571784316	1.7418937515398478	1				NaN	NaN	0	NaN	1137	2968	4100
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4116	17.336	NaN	2345.5	30	0	576.67	0.214	+			39708	STIPPHVQK	9	46	503.7879944561362	1005.5614359790724	2	503.7879943847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STIPPHVQK_	ENSG00000163513|ENST00000295754|TGFBR2;nc|ENSG00000163513|P37173-2|TGFBR2;nc|ENSG00000163513|P37173-3|TGFBR2;TGFBR2|p.H523Rfs*19|1|0.27|ENSG00000163513|chr3:30691458-30691459|-/GACC|frameshift_variant	34.172542307311794	0.4838870758800184	1				NaN	NaN	0	NaN	1143	2971	4115
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4117	17.34	NaN	1635.1	30	0	336.99	0.106	+			47605	VRTGLWSAVG	10	45	523.2915420773722	NaN	0	523.2919921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VRTGLWSAVG_	ENST00000156825.5_1_19:1577583-1577715:-|nuORF	27.882242232435846	0.4086243523356342	1				NaN	NaN	0	NaN	1144	2971	4115
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4118	17.342	NaN	2136	30	0	385.98	0.106				-1	LQWWRPRR	8	46	620.3445434570312	NaN	0	620.3445434570312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LQWWRPRR_	ENST00000361658.6_1_17:19750207-19752716:-|nuORF	35.61828744233558	1.7418937515398478	1				NaN	NaN	0	NaN	1145	2971	4115
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4119	17.344	NaN	1740.3	30	0	266.44	0.106	+			8447	EARKVVLAW	9	50	536.3173530365904	NaN	0	536.318359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EARKVVLAW_	ENSG00000146842|ENST00000397622|TMEM209;nc|ENSG00000146842|Q96SK2-2|TMEM209;nc|ENSG00000146842|Q96SK2-3|TMEM209;nc|ENSG00000146842|Q96SK2-4|TMEM209	39.252832667884924	0.27938773122138094	1				NaN	NaN	0	NaN	1146	2971	4115
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4120	17.345	NaN	2194.3	30	0	469.47	0.106			+	21295	KLRWITIALT	10	55	607.8866511654825	1213.7587493977649	2	607.88671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KLRWITIALT_	REV__ENSG00000103534|ENST00000542583|TMC5;REV__ENST00000567478.5_1_16:19467998-19503571:+|nuORF;REV__nc|ENSG00000103534|Q6UXY8-3|TMC5;REV__nc|ENSG00000103534|Q6UXY8-4|TMC5	31.634271133179894	0.6214930414500597	1				NaN	NaN	0	NaN	1147	2971	4115
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4121	17.347	NaN	1352.2	30	0	406.03	0.036	+			17186	HTSEVVAIKK	10	43	556.3279424613754	NaN	0	556.3280029296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HTSEVVAIKK_	ENSG00000135090|ENST00000392533|TAOK3;TAOK3|p.I311Nfs*13|2|0.27|ENSG00000135090|chr12:118201351-118201352|-/T|frameshift_variant	36.446750945000026	0.3805027428805705	1				NaN	NaN	0	NaN	1148	2971	4115
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4128	17.365	NaN	3137.6	30	0	560.84	0.214	+			3172	ASIQPSKVGK	10	63	507.80065504662224	1013.5867571600445	2	507.8004150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASIQPSKVGK_	ENSG00000167962|ENST00000562103|ZNF598;ENST00000565396.5_1_16:2048964-2050409:-|nuORF;nc|ENSG00000167962|Q86UK7-2|ZNF598;nc|ENSG00000167962|Q86UK7-3|ZNF598;nc|ENSG00000167962|Q86UK7-4|ZNF598;nc|ENSG00000167962|Q86UK7|ZNF598;ZNF598|p.P646Afs*20|1|0.5|ENSG00000167962|chr16:1999075-1999076|-/G|frameshift_variant	93.5975768576971	0.11047702954938905	1				NaN	NaN	0	NaN	1152	2974	4127
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4129	17.369	NaN	1590.8	30	0	231.85	0.106			+	50233	WPGCRLIE	8	46	487.2504820612519	NaN	0	487.25042724609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WPGCRLIE_	REV__ENSG00000133640|ENST00000393217|LRRIQ1;REV__ENST00000525971.6_1_12:85431954-85518298:+|nuORF;REV__nc|ENSG00000133640|Q96JM4-2|LRRIQ1	44.53106598305862	1.7418937515398478	1				NaN	NaN	0	NaN	1153	2974	4127
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4130	17.371	NaN	1534.5	30	0	262.51	0.034			+	26486	LTLRTVEK	8	44	480.2974501501059	958.5803473670118	2	480.2978210449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LTLRTVEK_	REV__ENSG00000146197|ENST00000274938|SCUBE3;REV__nc|ENSG00000146197|Q8IX30-2|SCUBE3	66.42927471994793	0.4381325844043345	1				NaN	NaN	0	NaN	1154	2974	4127
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4138	17.39	NaN	2752.8	30	0	369.25	0.214	+			46320	VEKKATGE	8	49	431.237433654854	860.460314376508	2	431.2371520996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VEKKATGE_	ENST00000607967.1_1_10:104402974-104403835:-|nuORF	77.31757898189308	0.345924878368729	1				NaN	NaN	0	NaN	1159	2977	4137
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4139	17.394	NaN	3467.6	30	0	418.62	0.106	+			42788	TEAKIKQKL	9	50	529.832064654041	1057.649576374882	2	529.8322143554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEAKIKQKL_	ENSG00000072501|ENST00000322213|SMC1A;SMC1A|p.R426W|1|0.44|ENSG00000072501|chrX:53409482-53409482|G/A|missense_variant	72.2432373244024	0.13108886737667413	1				NaN	NaN	0	NaN	1160	2977	4137
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4140	17.396	NaN	2249	30	0	246.15	0.106	+			39796	STLDGVSRK	9	56	481.7662725927744	961.5179922523488	2	481.7663879394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STLDGVSRK_	ENSG00000163798|ENST00000326019|SLC4A1AP;nc|ENSG00000163798|Q9BWU0-1|SLC4A1AP;SLC4A1AP|p.L669Tfs*8|1|0.38|ENSG00000163798|chr2:27685159-27685160|-/A|frameshift_variant	82.7504851949679	0.08565546331141553	1				NaN	NaN	0	NaN	1161	2977	4137
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4141	17.398	NaN	1635.4	30	0	319.26	0.106			+	15862	GYGGQVLAG	9	44	411.21121969625005	820.4078864593001	2	411.2106018066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GYGGQVLAG_	REV__ATRN|p.P984Lfs*34|1|0.23|ENSG00000088812|chr20:3584079-3584079|C/-|frameshift_variant;REV__ENSG00000088812|ENST00000262919|ATRN;REV__nc|ENSG00000088812|O75882-2|ATRN;REV__nc|ENSG00000088812|O75882-3|ATRN	42.47446043378293	0.39123495718708534	1				NaN	NaN	0	NaN	1162	2977	4137
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4142	17.4	NaN	1077.5	30	0	101.66	0.106				-1	MGVIGLILP	9	43	464.78173828125	NaN	0	464.78173828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_M(Oxidation (M))GVIGLILP_	ALDH16A1|p.A347Gfs*5|1|0.36|ENSG00000161618|chr19:49462690-49462691|-/G|frameshift_variant;ALDH16A1|p.A347Lfs*155|1|0.37|ENSG00000161618|chr19:49462691-49462691|G/-|frameshift_variant;ALDH16A1|p.F409Sfs*93|1|0.42|ENSG00000161618|chr19:49464152-49464152|C/-|frameshift_variant;ALDH16A1|p.P165S|1|0.31|ENSG00000161618|chr19:49459842-49459842|C/T|missense_variant;ALDH16A1|p.Y528Mfs*99|1|0.33|ENSG00000161618|chr19:49465745-49465745|C/-|frameshift_variant;ENSG00000161618|ENST00000293350|ALDH16A1;ENST00000599652.5_1_19:49956588-49965222:+|nuORF;nc|ENSG00000161618|Q8IZ83-2|ALDH16A1;nc|ENSG00000161618|Q8IZ83-3|ALDH16A1	21.70233525837049	0.3635294413921169	1				NaN	NaN	0	NaN	1163	2977	4137
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4143	17.401	NaN	1543.4	30	0	357.54	0.106	+			12111	GAEQRKPLQ	9	35	342.86102023616115	1025.5612313086835	3	342.8608093261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GAEQRKPLQ_	ENSG00000166317|ENST00000394810|SYNPO2L;SYNPO2L|p.F821Sfs*27|2|0.29|ENSG00000166317|chr10:73647190-73647190|A/-|frameshift_variant;SYNPO2L|p.Q823Rfs*25|1|0.39|ENSG00000166317|chr10:73647185-73647185|G/-|frameshift_variant;SYNPO2L|p.S608Afs*70|1|0.47|ENSG00000166317|chr10:73647831-73647831|G/-|frameshift_variant	51.33545320467046	0.2872990594074956	1				NaN	NaN	0	NaN	1164	2977	4137
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4144	17.403	NaN	2281.4	30	0	563.29	0.034	+			18095	IKPTNLEK	8	45	471.7846705446859	941.5547881561719	2	471.7835693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IKPTNLEK_	ENSG00000164542|ENST00000440378|MATCAP2;ENST00000493327.1_1_7:36396426-36406798:-|nuORF;nc|ENSG00000164542|Q8NCT3-2|MATCAP2;nc|ENSG00000164542|Q8NCT3-3|MATCAP2;nc|ENSG00000164542|Q8NCT3-4|MATCAP2;nc|ENSG00000164542|Q8NCT3-5|MATCAP2;nc|ENSG00000164542|Q8NCT3|MATCAP2	23.04248740728303	0.7814162927298575	1				NaN	NaN	0	NaN	1165	2977	4137
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4151	17.421	NaN	7631.8	30	0	3206.6	0.214	+			3701	ATAALLRHK	9	61	490.80336600980377	979.5921790864076	2	490.80328369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATAALLRHK_	ENSG00000170915|ENST00000442253|PAQR8	131.03138772384656	0.014687601201650916	1				NaN	NaN	0	NaN	1169	2980	4150
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4152	17.425	NaN	2398.5	30	0	418.81	0.106			+	8028	DTRLNTVWMWG	11	63	689.8308520792609	NaN	0	689.8303833007812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DTRLNTVWMWG_	REV__ENSG00000145715|ENST00000274376|RASA1;REV__nc|ENSG00000145715|P20936-2|RASA1;REV__nc|ENSG00000145715|P20936-3|RASA1;REV__nc|ENSG00000145715|P20936-4|RASA1;REV__RASA1|p.N838Mfs*4|2|0.36|ENSG00000145715|chr5:87379754-87379754|A/-|frameshift_variant;REV__RASA1|p.V643Gfs*4|1|0.04|ENSG00000145715|chr5:87374313-87374314|-/GGCT|frameshift_variant;REV__RASA1|p.V643Mfs*15|1|0.04|ENSG00000145715|chr5:87374311-87374312|-/TA|frameshift_variant	33.921630207806714	0.41424167740351664	1				NaN	NaN	0	NaN	1170	2980	4150
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4153	17.427	NaN	1357.1	30	0	364.04	0.106	+			8043	DTYKMKIK	8	47	513.7881469726562	NaN	0	513.7881469726562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DTYKMKIK_	tr|U7SWT0|U7SWT0_FUSNUDihydroorotatedehydrogenaseB(NAD(+)),electrontransfersubunitOS=FusobacteriumnucleatumCTI-5OX=1316586GN=pyrKPE=3SV=1	35.61828744233558	1.7418937515398478	1				NaN	NaN	0	NaN	1171	2980	4150
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4154	17.429	NaN	3031.6	30	0	779.34	0.106			+	33723	RPGRPVVSI	9	38	327.5380427041469	979.5922987126407	3	327.53814697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RPGRPVVSI_	REV__ENSG00000152467|ENST00000282326|ZSCAN1	12.206847966760668	0.6112419832031292	1				NaN	NaN	0	NaN	1172	2980	4150
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4155	17.43	NaN	1610.1	30	0	340.05	0.106	+			18699	ITDSKVKLK	9	48	516.3262939453125	NaN	0	516.3262939453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ITDSKVKLK_	ENSG00000166233|ENST00000379887|ARIH1	56.43379154798735	0.16452882468284893	1				NaN	NaN	0	NaN	1173	2980	4150
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4156	17.432	NaN	1663.6	30	0	344.58	0.034			+	7774	DPDKQQSV	8	53	458.7220267074406	915.4295004816812	2	458.7219543457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DPDKQQSV_	REV__ENSG00000047410|ENST00000367478|TPR;REV__TPR|p.P2083Qfs*3|1|0.31|ENSG00000047410|chr1:186323735-186323735|G/-|frameshift_variant;REV__TPR|p.T2133Lfs*63|1|0.03|ENSG00000047410|chr1:186322382-186322383|-/GTACTAATAAG|frameshift_variant	45.9519527083369	0.6193794311207887	1				NaN	NaN	0	NaN	1174	2980	4150
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4161	17.447	NaN	7073	30	0	1915.1	0.214	+			31131	QGDKKTWRW	9	72	602.8146822994694	1203.6148116657387	2	602.8147583007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QGDKKTWRW_	ENSG00000142623|ENST00000375471|PADI1	67.49366992349736	0.1516260258713357	1				NaN	NaN	0	NaN	1176	2983	4160
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4162	17.45	NaN	3786.1	30	0	588.5	0.106	+			41113	SVISHQHLSK	10	69	568.314545108772	NaN	0	568.3146362304688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVISHQHLSK_	ENSG00000164749|ENST00000396423|HNF4G;nc|ENSG00000164749|Q14541-2|HNF4G;nc|ENSG00000164749|Q14541|HNF4G	80.91624569148213	0.09495298207812954	1				NaN	NaN	0	NaN	1177	2983	4160
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4163	17.452	NaN	1652.4	30	0	282.21	0.106	+			46839	VIFCNTKRK	9	48	583.3289951531602	NaN	0	583.328857421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_VIFC(Carbamidomethyl (C))NTKRK_	ENSG00000141543|ENST00000649764|EIF4A3;ENST00000575978.1_1_17:78111144-78112096:-|nuORF	62.107414245175825	0.1403307765918332	1				NaN	NaN	0	NaN	1178	2983	4160
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4164	17.454	NaN	1883.9	30	0	219.9	0.106	+			28231	NCITQLNLLEC	11	53	689.3284682553333	NaN	0	689.3280639648438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_NC(Carbamidomethyl (C))ITQLNLLEC(Carbamidomethyl (C))_	ENSG00000154305|ENST00000344922|MIA3;MIA3|p.P1645Yfs*19|1|0.06|ENSG00000154305|chr1:222659963-222659964|-/TATAG|frameshift_variant;nc|ENSG00000154305|Q5JRA6-2|MIA3;nc|ENSG00000154305|Q5JRA6-4|MIA3	42.86426827375447	0.36657022113551535	1				NaN	NaN	0	NaN	1179	2983	4160
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4165	17.456	NaN	2059.2	30	0	218.77	0.036	+			40393	STVDAEAVHK	10	62	528.769268160404	1055.5239833876078	2	529.2708129882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STVDAEAVHK_	ENSG00000116062|ENST00000234420|MSH6;nc|ENSG00000116062|P52701-3|MSH6;nc|ENSG00000116062|P52701-4|MSH6	85.16082228582465	0.15877915086237185	1				NaN	NaN	0	NaN	1180	2983	4160
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4173	17.474	NaN	2648.4	30	0	271.75	0.214	+			13732	GQAVALRAK	9	51	457.28236024786025	912.5501675625205	2	457.2824401855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GQAVALRAK_	ENSG00000159692|ENST00000382952|CTBP1;ENST00000511907.1_1_4:1208072-1210006:-|nuORF;nc|ENSG00000159692|Q13363|CTBP1	93.19546047674547	0.05585629608842056	1				NaN	NaN	0	NaN	1185	2986	4172
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4174	17.478	NaN	2564.9	30	0	214.44	0.106			+	50210	WMRLYQQK	8	59	576.8038506289777	1151.5931483247552	2	576.804443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WMRLYQQK_	REV__PHF14|p.E136Kfs*65|1|0.6|ENSG00000106443|chr7:10982660-10982660|A/-|frameshift_variant	79.45101966838831	0.3281480470254892	1				NaN	NaN	0	NaN	1186	2986	4172
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4175	17.48	NaN	1735.9	30	0	273.74	0.106				-1	YLEGQEYRMYN	11	40	741.320953788961	1480.627354644722	2	741.3209838867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_YLEGQEYRM(Oxidation (M))YN_	ENSG00000070610|ENST00000378103|GBA2;nc|ENSG00000070610|Q9HCG7-2|GBA2;nc|ENSG00000070610|Q9HCG7-3|GBA2	17.468008924990375	0.788697330333842	1				NaN	NaN	0	NaN	1187	2986	4172
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4176	17.481	NaN	1936.7	30	0	181.97	0.037	+			23598	LANKKDLEEA	10	47	565.8049987916436	1129.595444650087	2	565.8050537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LANKKDLEEA_	ENSG00000059573|ENST00000371224|ALDH18A1;nc|ENSG00000059573|P54886-2|ALDH18A1	36.446750945000026	0.5818864909973037	1				NaN	NaN	0	NaN	1188	2986	4172
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4184	17.5	NaN	2085.4	30	0	246.4	0.214	+			40579	SVAELRSQK	9	59	509.2879997205906	1016.5614465079813	2	509.2887268066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVAELRSQK_	ENSG00000131149|ENST00000253458|GSE1;nc|ENSG00000131149|Q14687-2|GSE1;nc|ENSG00000131149|Q14687-3|GSE1	99.78786539795823	0.03941834715970116	1				NaN	NaN	0	NaN	1193	2989	4183
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4185	17.503	NaN	3045.6	30	0	799.47	0.106	+			15216	GTSSSAASSLK	11	55	498.2540624149645	994.493571896729	2	498.25360107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTSSSAASSLK_	ARID1A|p.F2141Sfs*59|5|0.26|ENSG00000117713|chr1:26780313-26780313|C/-|frameshift_variant;ARID1A|p.K1161Sfs*19|1|0.29|ENSG00000117713|chr1:26772573-26772573|A/-|frameshift_variant;ARID1A|p.M1564Hfs*8|1|0.18|ENSG00000117713|chr1:26774910-26774911|-/C|frameshift_variant;ARID1A|p.N1475Tfs*6|1|0.36|ENSG00000117713|chr1:26774648-26774648|A/-|frameshift_variant;ARID1A|p.P1115Qfs*46|1|0.32|ENSG00000117713|chr1:26771260-26771260|C/-|frameshift_variant;ARID1A|p.P1326Rfs*155|1|0.15|ENSG00000117713|chr1:26773685-26773685|C/-|frameshift_variant;ARID1A|p.P1406Rfs*37|1|0.42|ENSG00000117713|chr1:26774444-26774448|CCCCA/-|frameshift_variant;ARID1A|p.P1568Lfs*44|1|0.14|ENSG00000117713|chr1:26774926-26774926|C/-|frameshift_variant;ARID1A|p.P1575Hfs*37|1|0.38|ENSG00000117713|chr1:26774947-26774947|C/-|frameshift_variant;ARID1A|p.P2114Rfs*21|1|0.46|ENSG00000117713|chr1:26780236-26780236|C/-|frameshift_variant;ARID1A|p.V2244Gfs*34|1|0.31|ENSG00000117713|chr1:26780626-26780627|-/G|frameshift_variant;ENSG00000049618|ENST00000636930|ARID1B;ENSG00000117713|ENST00000324856|ARID1A;nc|ENSG00000049618|Q8NFD5-1|ARID1B;nc|ENSG00000049618|Q8NFD5-2|ARID1B;nc|ENSG00000049618|Q8NFD5|ARID1B;nc|ENSG00000117713|O14497-2|ARID1A;nc|ENSG00000117713|O14497-3|ARID1A	58.62960593111931	0.3356877741313683	1				NaN	NaN	0	NaN	1194	2989	4183
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4186	17.505	NaN	3567.6	30	0	974.88	0.106	+			42013	SVYSGIRHK	9	54	523.7905557337695	1045.5665585343388	2	523.7907104492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVYSGIRHK_	ENSG00000068383|ENST00000368594|INPP5A;ENST00000487614.1_1_10:134511381-134540457:+|nuORF;ENST00000498337.1_1_10:134523853-134567324:+|nuORF;INPP5A|p.P199H|1|0.09|ENSG00000068383|chr10:132710405-132710405|C/A|missense_variant;JAG1-INPP5A|1|fusion	77.31757898189308	0.1091473830098891	1				NaN	NaN	0	NaN	1195	2989	4183
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4187	17.507	NaN	742.08	30	0	92.468	0.106			+	40846	SVERSIIK	8	37	466.28228759765625	NaN	0	466.28228759765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVERSIIK_	REV__ATIC|p.E517Rfs*11|1|0.32|ENSG00000138363|chr2:215349139-215349151|GAGTTACTCACTG/-|frameshift_variant;REV__ENSG00000138363|ENST00000236959|ATIC;REV__ENST00000443953.5_1_2:216177073-216214375:+|nuORF;REV__ENST00000446622.5_1_2:216199652-216212358:+|nuORF;REV__nc|ENSG00000138363|P31939-2|ATIC	42.396135135203025	1.7418937515398478	1				NaN	NaN	0	NaN	1196	2989	4183
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4188	17.509	NaN	6577.5	30	0	3370.1	0.036	+			43323	TGASDAIVTVL	11	39	349.52949230013735	1045.5666475006121	3	349.8639221191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TGASDAIVTVL_	ENSG00000167701|ENST00000394955|GPT;GPT|p.L474Wfs*11|1|0.29|ENSG00000167701|chr8:144506923-144506923|C/-|frameshift_variant	25.57405402267927	0.7215402271931856	1				NaN	NaN	0	NaN	1197	2989	4183
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4196	17.528	NaN	2272.3	30	0	408.88	0.214	+			33747	RPQEVGPR	8	42	469.76177095277154	NaN	0	469.761962890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RPQEVGPR_	ENST00000358337.9_1_5:140050841-140051006:+|nuORF	58.78195531508484	1.7418937515398478	1				NaN	NaN	0	NaN	1202	2992	4195
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4197	17.532	NaN	3828.2	30	0	498.85	0.106	+			23146	KVYDKAINR	9	68	553.8191886901524	1105.6238244471047	2	553.8201904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVYDKAINR_	ENSG00000164190|ENST00000282516|NIPBL;ENST00000514335.1_1_5:37051847-37064632:+|nuORF;nc|ENSG00000164190|Q6KC79-2|NIPBL;NIPBL|p.I2776Lfs*3|1|0.17|ENSG00000164190|chr5:37064797-37064797|A/-|frameshift_variant	115.23196543181992	0.024086211614104236	1				NaN	NaN	0	NaN	1203	2992	4195
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4198	17.534	NaN	2076.2	30	0	247.98	0.106			+	47160	VLSGRALKQLE	11	42	607.367220413298	1212.719887893396	2	607.3674926757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VLSGRALKQLE_	REV__ENSG00000048828|ENST00000277165|FAM120A;REV__FAM120A|p.V551Sfs*6|1|0.21|ENSG00000048828|chr9:93529491-93529491|C/-|frameshift_variant;REV__nc|ENSG00000048828|Q9NZB2-2|FAM120A;REV__nc|ENSG00000048828|Q9NZB2-4|FAM120A;REV__nc|ENSG00000048828|Q9NZB2-5|FAM120A;REV__nc|ENSG00000048828|Q9NZB2-6|FAM120A	36.527901853580055	0.6054519527965578	1				NaN	NaN	0	NaN	1204	2992	4195
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4199	17.536	NaN	2412.5	30	0	531.56	0.106	+			40745	SVDGPVSQK	9	55	458.7400195060634	NaN	0	458.7398681640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVDGPVSQK_	ENSG00000119231|ENST00000323460|SENP5;nc|ENSG00000119231|Q96HI0-2|SENP5	87.69643885390035	0.04624013146650493	1				NaN	NaN	0	NaN	1205	2992	4195
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4200	17.538	NaN	1227.3	30	0	209.81	0.106			+	16625	HHAAHPGGPPP	11	44	537.764580348645	NaN	0	537.7640380859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HHAAHPGGPPP_	REV__ENST00000216487.11_1_14:93118154-93118406:+|nuORF	17.364965105453717	0.456735970842152	1				NaN	NaN	0	NaN	1206	2992	4195
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4201	17.539	NaN	2326.4	30	0	482.72	0.035			+	20415	KETNLSLLS	9	60	502.7845021521135	NaN	0	502.7845153808594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KETNLSLLS_	REV__ENSG00000143643|ENST00000366661|TTC13;REV__nc|ENSG00000143643|Q8NBP0-2|TTC13;REV__TTC13|p.R627Nfs*8|1|0.19|ENSG00000143643|chr1:230921438-230921439|TC/-|frameshift_variant	62.107414245175825	0.1403307765918332	1				NaN	NaN	0	NaN	1207	2992	4195
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4211	17.563	NaN	2235.4	30	0	406.05	0.214				-1	GVCTKITQK	9	56	517.7868080309112	1033.5590631286223	2	517.787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GVC(Carbamidomethyl (C))TKITQK_	ENSG00000178229|ENST00000321545|ZNF543	63.53385203322761	0.18415635464017938	1				NaN	NaN	0	NaN	1214	2995	4210
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4212	17.566	NaN	2025.6	30	0	329.52	0.106	+			5876	AVIVDKKMQK	10	63	580.3470530931941	NaN	0	580.3472900390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVIVDKKMQK_	ENSG00000205352|ENST00000429243|PRR13;nc|ENSG00000205352|Q9NZ81-2|PRR13	88.17693792209575	0.06076230397739847	1				NaN	NaN	0	NaN	1215	2995	4210
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4213	17.568	NaN	1826.5	30	0	967.13	0.106	+			31163	QGIWSQLDH	9	30	542.2628547764393	1082.5111566196786	2	542.2640991210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QGIWSQLDH_	ENSG00000203710|ENST00000367049|CR1;nc|ENSG00000203710|P17927|CR1	22.579656572578934	0.5922287541734749	1				NaN	NaN	0	NaN	1216	2995	4210
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4214	17.57	NaN	1271.6	30	0	346.31	0.03				-1	 	0	35	334.7637989650774	667.5130449969548	2	335.2656555175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	1217	2995	4210
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4226	17.596	NaN	3305.5	30	0	639.83	0.214				-1	CAIFSANLV	9	43	332.17354119177094	NaN	0	332.173583984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_C(Carbamidomethyl (C))AIFSANLV_	ENSG00000131355|ENST00000253673|ADGRE3;nc|ENSG00000131355|Q9BY15-2|ADGRE3	39.252832667884924	0.27938773122138094	1				NaN	NaN	0	NaN	1226	2998	4225
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4227	17.599	NaN	1646.6	30	0	271.44	0.106	+			25016	LLGLYFLSH	9	56	531.801025390625	NaN	0	531.801025390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LLGLYFLSH_	ENSG00000109084|ENST00000226230|TMEM97;ENST00000582384.1_1_17:26646301-26653610:+|nuORF	42.47446043378293	0.25855550551448697	1				NaN	NaN	0	NaN	1227	2998	4225
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4228	17.601	NaN	2610.6	30	0	573.72	0.106	+			13837	GQSPFQQRK	9	50	538.286409142465	1074.55826535173	2	538.2864990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GQSPFQQRK_	ENSG00000198055|ENST00000355472|GRK6;nc|ENSG00000198055|P43250-2|GRK6;nc|ENSG00000198055|P43250-3|GRK6	45.97224482568171	0.3502073465782774	1				NaN	NaN	0	NaN	1228	2998	4225
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4229	17.603	NaN	904.05	30	0	382.96	0.106			+	361	AAQLDNQP	8	25	428.71127402604856	NaN	0	428.7112731933594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AAQLDNQP_	REV__ENSG00000131778|ENST00000369258|CHD1L;REV__nc|ENSG00000131778|Q86WJ1-2|CHD1L;REV__nc|ENSG00000131778|Q86WJ1-3|CHD1L;REV__nc|ENSG00000131778|Q86WJ1-4|CHD1L;REV__nc|ENSG00000131778|Q86WJ1-5|CHD1L	13.775330524044264	1.7418937515398478	1				NaN	NaN	0	NaN	1229	2998	4225
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4230	17.605	NaN	1054.7	30	0	365.73	0.106	+			31251	QHLEKIRLEP	10	31	421.5781851559444	NaN	0	421.2432556152344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QHLEKIRLEP_	CCDC13|p.G697Afs*3|1|0.38|ENSG00000244607|chr3:42709038-42709038|C/-|frameshift_variant;ENSG00000244607|ENST00000310232|CCDC13	14.693671053092006	0.4201028297492154	1				NaN	NaN	0	NaN	1230	2998	4225
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4231	17.606	NaN	1501.8	30	0	184.74	0.106	+			32158	QSPYPYAPQ	9	39	525.7488086334803	NaN	0	525.7483520507812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QSPYPYAPQ_	ENSG00000076201|ENST00000265562|PTPN23;PTPN23|p.L1014Pfs*68|1|0.36|ENSG00000076201|chr3:47410831-47410832|-/C|frameshift_variant;PTPN23|p.L1513Wfs*71|1|0.44|ENSG00000076201|chr3:47412805-47412805|G/-|frameshift_variant;PTPN23|p.P1258Rfs*2|1|0.28|ENSG00000076201|chr3:47411566-47411566|C/-|frameshift_variant	34.172542307311794	0.30503706118289736	1				NaN	NaN	0	NaN	1231	2998	4225
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4232	17.608	NaN	1260.9	30	0	127.74	0.036	+			24462	LGFSFSRED	9	43	529.2501250847324	NaN	0	529.2490234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LGFSFSRED_	ENSG00000163629|ENST00000411767|PTPN13;nc|ENSG00000163629|Q12923-2|PTPN13;nc|ENSG00000163629|Q12923-3|PTPN13;nc|ENSG00000163629|Q12923-4|PTPN13;PTPN13|p.K1535Sfs*16|1|0.38|ENSG00000163629|chr4:86769879-86769879|A/-|frameshift_variant;PTPN13|p.T2330Qfs*13|1|0.12|ENSG00000163629|chr4:86807799-86807799|A/-|frameshift_variant	25.57405402267927	0.3484490411150625	1				NaN	NaN	0	NaN	1232	2998	4225
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4242	17.632	NaN	17061	30	0	8652	0.214	+			21824	KRETVLRK	8	70	515.3299478911388	1028.6453428490775	2	515.3301391601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KRETVLRK_	ENSG00000159450|ENST00000614923|TCHH	60.11826168202944	0.5006107059937851	1				NaN	NaN	0	NaN	1239	3001	4241
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4243	17.635	NaN	3054.8	30	0	253.04	0.106	+			46676	VGGSTRIPK	9	53	457.77432910271574	913.5341052722315	2	457.77398681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VGGSTRIPK_	ENSG00000044574|ENST00000324460|HSPA5;ENSG00000109971|ENST00000534624|HSPA8;ENSG00000126803|ENST00000247207|HSPA2;ENSG00000173110|ENST00000309758|HSPA6;ENSG00000204388|ENST00000375650|HSPA1B;ENSG00000204389|ENST00000375651|HSPA1A;ENSG00000204390|ENST00000375654|HSPA1L;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;HSPA5|p.N522Ifs*12|1|0.36|ENSG00000044574|chr9:125236992-125236992|T/-|frameshift_variant;HSPA6|p.D632Gfs*9|1|0.12|ENSG00000173110|chr1:161526547-161526548|-/G|frameshift_variant;HSPA8|p.K569Dfs*6|1|0.3|ENSG00000109971|chr11:123058302-123058303|TC/-|frameshift_variant;nc|ENSG00000109971|P11142-2|HSPA8;nc|ENSG00000204389|P0DMV8-2|HSPA1A	42.86426827375447	0.38666266728046506	1				NaN	NaN	0	NaN	1240	3001	4241
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4244	17.637	NaN	4586.6	30	0	648.21	0.106	+			2564	AQATVHVVK	9	56	476.78193393874653	951.5493149442931	2	476.7815856933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AQATVHVVK_	ENST00000430374.5_1_2:217279626-217279842:+|nuORF	112.10723106719422	0.02684780151337622	1				NaN	NaN	0	NaN	1241	3001	4241
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4245	17.639	NaN	1256.9	30	0	316.53	0.106	+			40059	STNNMAYNK	9	46	521.7343706612533	1041.4541883893064	2	521.73486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STNNMAYNK_	ENSG00000163110|ENST00000317968|PDLIM5	75.04331003522576	0.118981335847003	1				NaN	NaN	0	NaN	1242	3001	4241
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4246	17.641	NaN	2342.8	30	0	788.91	0.037	+			14104	GSLKPHDYPK	10	39	381.2045129557851	NaN	0	381.20465087890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GSLKPHDYPK_	ENSG00000107537|ENST00000263038|PHYH;nc|ENSG00000107537|O14832-2|PHYH	53.08895987439943	0.2860736266326207	1				NaN	NaN	0	NaN	1243	3001	4241
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4260	17.67	NaN	15294	30	0	3877.2	0.211	+			6859	CKSNWRGGWDW	11	76	697.8056103498981	1393.596667766596	2	697.8055419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CKSNWRGGWDW_	ENSG00000183560|ENST00000687084|IZUMO1R;nc|ENSG00000183560|A6ND01-2|IZUMO1R	48.601550744091256	0.44024757269956427	1				NaN	NaN	0	NaN	1254	3004	4259
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4261	17.674	NaN	3873.5	30	0	892.26	0.106	+			39878	STLPPVKSK	9	61	478.79179640748976	955.5690398817795	2	478.79193115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STLPPVKSK_	ARFGEF1|p.F1680Lfs*8|1|0.29|ENSG00000066777|chr8:67203171-67203171|A/-|frameshift_variant;ARFGEF1|p.F501Lfs*19|1|0.46|ENSG00000066777|chr8:67271771-67271771|A/-|frameshift_variant;ARFGEF1|p.G612Vfs*2|1|0.33|ENSG00000066777|chr8:67266964-67266964|T/-|frameshift_variant;ARFGEF1|p.K888Rfs*10|1|0.36|ENSG00000066777|chr8:67253485-67253486|TT/-|frameshift_variant;ENSG00000066777|ENST00000262215|ARFGEF1	114.8945686534367	0.024290463251177924	1				NaN	NaN	0	NaN	1255	3004	4259
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4262	17.676	NaN	2279.5	30	0	520.89	0.106			+	-1	EFCYSRFFWLR	11	33	805.8790941546931	NaN	0	805.8792114257812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_EFC(Carbamidomethyl (C))YSRFFWLR_	REV__ENST00000443617.6_1_15:64041916-64041982:-|nuORF	9.182911543092327	0.456735970842152	1				NaN	NaN	0	NaN	1256	3004	4259
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4263	17.677	NaN	1107.5	30	0	261.64	0.036			+	10540	EWTSGSQWN	9	27	547.7285408472911	1093.4425287613822	2	547.7283935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EWTSGSQWN_	REV__ENST00000471496.5_1_3:183171860-183173034:+|nuORF	21.9598887501803	0.5980208138527809	1				NaN	NaN	0	NaN	1257	3004	4259
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4271	17.697	NaN	4566.9	30	0	476.27	0.214	+			15699	GVNDSPALKK	10	60	514.7911156103355	1027.567678287471	2	514.7907104492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVNDSPALKK_	ENSG00000018625|ENST00000361216|ATP1A2;ENSG00000075673|ENST00000381946|ATP12A;ENSG00000105409|ENST00000648268|ATP1A3;ENSG00000105675|ENST00000262623|ATP4A;ENSG00000132681|ENST00000368081|ATP1A4;ENSG00000163399|ENST00000295598|ATP1A1;ENST00000418334.5_1_1:160144048-160152563:+|nuORF;ENST00000472488.5_1_1:160085570-160106822:+|nuORF;nc|ENSG00000075673|P54707-2|ATP12A;nc|ENSG00000105409|P13637-2|ATP1A3;nc|ENSG00000105409|P13637-3|ATP1A3;nc|ENSG00000163399|P05023-3|ATP1A1;nc|ENSG00000163399|P05023-4|ATP1A1	106.68306549817024	0.05784995512091477	1				NaN	NaN	0	NaN	1262	3007	4270
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4272	17.701	NaN	2833.4	30	0	754.33	0.106	+			15544	GVFEGHTSK	9	47	481.24038982676626	960.4662267203325	2	481.24029541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GVFEGHTSK_	ENSG00000103994|ENST00000564754|ZNF106;nc|ENSG00000103994|Q9H2Y7-2|ZNF106;nc|ENSG00000103994|Q9H2Y7|ZNF106	82.7504851949679	0.08565546331141553	1				NaN	NaN	0	NaN	1263	3007	4270
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4273	17.703	NaN	2086.3	30	0	215.85	0.106	+			41533	SVQAASGIRR	10	56	522.7993711827296	NaN	0	522.7994384765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVQAASGIRR_	ENSG00000198589|ENST00000651943|LRBA;LRBA|p.L2590*|1|0.41|ENSG00000198589|chr4:150310342-150310342|A/-|frameshift_variant;LRBA|p.T2011Qfs*11|1|0.19|ENSG00000198589|chr4:150599022-150599022|T/-|frameshift_variant;nc|ENSG00000198589|P50851-2|LRBA;nc|ENSG00000198589|P50851|LRBA	59.93077597824379	0.23484348948204886	1				NaN	NaN	0	NaN	1264	3007	4270
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4274	17.705	NaN	4653.7	30	0	888.96	0.106	+			40200	STSCPVVQK	9	54	503.2552331512964	1004.4959133693928	2	503.2557067871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_STSC(Carbamidomethyl (C))PVVQK_	ENSG00000130935|ENST00000253247|NOL11;ENST00000583108.5_1_17:65733963-65734484:+|nuORF	104.74654710444128	0.034358562718640136	1				NaN	NaN	0	NaN	1265	3007	4270
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4275	17.706	NaN	1434	30	0	529.98	0.106	+			3117	ASGSTTFTK	9	48	450.2268427269465	898.439132520693	2	450.2267150878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASGSTTFTK_	ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1670Tfs*23|1|0.29|ENSG00000174231|chr17:1659487-1659487|C/-|frameshift_variant	65.46538089061403	0.16805504838372562	1				NaN	NaN	0	NaN	1266	3007	4270
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4276	17.708	NaN	1226.2	30	0	259.78	0.106				-1	RRTLCHVE	8	39	535.7801513671875	NaN	0	535.7801513671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_RRTLC(Carbamidomethyl (C))HVE_	ENSG00000086570|ENST00000261800|FAT2;FAT2|p.D4043Tfs*8|1|0.1|ENSG00000086570|chr5:151507544-151507544|C/-|frameshift_variant;FAT2|p.P2377Qfs*41|1|0.34|ENSG00000086570|chr5:151543997-151543997|G/-|frameshift_variant;FAT2|p.V3716Ffs*44|1|0.22|ENSG00000086570|chr5:151521447-151521447|C/-|frameshift_variant;FAT2|p.Y3462Tfs*16|1|0.37|ENSG00000086570|chr5:151525891-151525891|G/-|frameshift_variant	25.450171626174864	1.7418937515398478	1				NaN	NaN	0	NaN	1267	3007	4270
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4277	17.71	NaN	1539.9	30	0	169.79	0.036	+			21476	KNIKDLRAQ	9	53	543.3253784179688	NaN	0	543.3253784179688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KNIKDLRAQ_	ENST00000555540.1_1_14:35981656-35982271:-|nuORF	45.02220120713402	0.24099765136254067	1				NaN	NaN	0	NaN	1268	3007	4270
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4288	17.736	NaN	10245	30	0	1862.5	0.214	+			12310	GDDSVVIGGK	10	63	473.7455181491911	945.4764833651823	2	473.7453308105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GDDSVVIGGK_	ENSG00000155980|ENST00000455537|KIF5A	71.87747018426188	0.26198133118427214	1				NaN	NaN	0	NaN	1276	3010	4287
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4289	17.739	NaN	2860.4	30	0	496.74	0.106	+			22306	KTETPIVSK	9	53	334.8656548589022	1001.5751351769065	3	334.86566162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTETPIVSK_	ENSG00000124164|ENST00000475243|VAPB;ENST00000463370.5_1_20:57007450-57019288:+|nuORF;ENST00000476395.1_1_20:57015848-57019288:+|nuORF	51.19269402634007	0.2889735674168909	1				NaN	NaN	0	NaN	1277	3010	4287
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4290	17.741	NaN	2528.5	30	0	289.49	0.106	+			39551	STGEEVAMRK	10	56	554.2774547164737	NaN	0	554.2775268554688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STGEEVAMRK_	ENSG00000160789|ENST00000368300|LMNA;ENST00000496738.5_1_1:156106882-156107552:+|nuORF;nc|ENSG00000160789|P02545-2|LMNA;nc|ENSG00000160789|P02545-4|LMNA;nc|ENSG00000160789|P02545-5|LMNA;nc|ENSG00000160789|P02545-6|LMNA	54.722347961057174	0.27574710963839943	1				NaN	NaN	0	NaN	1278	3010	4287
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4291	17.743	NaN	1589	30	0	167.14	0.106				-1	NAGIALGKLC	10	52	508.78151985587135	NaN	0	508.7813415527344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_NAGIALGKLC(Carbamidomethyl (C))_	ENSG00000149292|ENST00000529221|TTC12;ENST00000480233.1_1_11:113235406-113237019:+|nuORF;ENST00000496311.1_1_11:113235534-113237012:+|nuORF;nc|ENSG00000149292|Q9H892-2|TTC12	34.172542307311794	0.38797011891751465	1				NaN	NaN	0	NaN	1279	3010	4287
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4292	17.745	NaN	1173.3	30	0	386.91	0.106			+	25897	LSGFGLGAAV	10	31	446.25030428082573	890.4860556284515	2	446.25030517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSGFGLGAAV_	REV__ENST00000442035.5_1_X:47053355-47057738:+|nuORF	40.5726180659479	0.5438686920517214	1				NaN	NaN	0	NaN	1280	3010	4287
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4293	17.747	NaN	2677.5	30	0	454.47	0.037			+	28407	NESPNGYRLQ	10	57	589.284840426804	NaN	0	589.3208618164062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NESPNGYRLQ_	REV__AMOT|p.L850Cfs*59|1|0.13|ENSG00000126016|chrX:112779606-112779606|G/-|frameshift_variant;REV__AMOT|p.P239Hfs*14|2|0.34|ENSG00000126016|chrX:112822411-112822411|G/-|frameshift_variant;REV__AMOT|p.Q392Lfs*49|1|0.09|ENSG00000126016|chrX:112815575-112815576|-/TCCA|frameshift_variant;REV__AMOT|p.S319Pfs*56|1|0.11|ENSG00000126016|chrX:112815796-112815796|C/-|frameshift_variant;REV__ENSG00000126016|ENST00000371959|AMOT	37.81151784470057	0.3760215235790741	1				NaN	NaN	0	NaN	1281	3010	4287
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4304	17.773	NaN	9029.7	30	0	1993.4	0.214	+			6043	AVMGNPKVK	9	69	472.2732285951606	942.5319042571213	2	472.2730712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVMGNPKVK_	ENSG00000223609|ENST00000650601|HBD;ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF;HBD|p.A63V|1|0.34|ENSG00000223609|chr11:5234118-5234118|G/A|missense_variant	128.8611167810002	0.015835461597062447	1				NaN	NaN	0	NaN	1289	3013	4303
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4305	17.776	NaN	5849.7	30	0	1073.8	0.106	+			4108	ATDYGTIKK	9	63	498.7716249942366	995.5286970552733	2	498.7715148925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATDYGTIKK_	ENSG00000112902|ENST00000382496|SEMA5A	120.30596017624542	0.02101454110788768	1				NaN	NaN	0	NaN	1290	3013	4303
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4306	17.778	NaN	2175.9	30	0	357.27	0.106	+			15231	GTSSVIVSRK	10	48	517.3038846446917	NaN	0	517.3038940429688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTSSVIVSRK_	ENSG00000072803|ENST00000517395|FBXW11;nc|ENSG00000072803|Q9UKB1-2|FBXW11;nc|ENSG00000072803|Q9UKB1-3|FBXW11;nc|ENSG00000072803|Q9UKB1|FBXW11	54.722347961057174	0.27574710963839943	1				NaN	NaN	0	NaN	1291	3013	4303
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4307	17.78	NaN	2102.2	30	0	531.93	0.106			+	1998	AKGQVDGIAG	10	35	458.24848547572674	914.4824180182535	2	458.24822998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AKGQVDGIAG_	REV__ENST00000372806.7_1_20:43704391-43704694:+|nuORF	33.921630207806714	0.6028135429846169	1				NaN	NaN	0	NaN	1292	3013	4303
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4308	17.782	NaN	3547.6	30	0	610.23	0.106			+	-1	MNCCHNQAI	9	60	545.7153812785298	1089.4162096238595	2	545.716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_MNCC(Carbamidomethyl (C))HNQAI_	REV__nc|ENSG00000149294|P13591-5|NCAM1	29.14955571784316	0.5308295550522326	1				NaN	NaN	0	NaN	1293	3013	4303
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4309	17.784	NaN	2407.8	30	0	313.35	0.106	+			48956	VVFVTRKK	8	52	488.8185905339024	975.6226281346048	2	488.8189392089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VVFVTRKK_	APAF1|p.E1208Gfs*14|1|0.23|ENSG00000120868|chr12:98732437-98732438|-/G|frameshift_variant;APAF1|p.F787Sfs*2|1|0.33|ENSG00000120868|chr12:98699461-98699461|C/-|frameshift_variant;ENSG00000120868|ENST00000551964|APAF1;nc|ENSG00000120868|O14727-2|APAF1;nc|ENSG00000120868|O14727-3|APAF1;nc|ENSG00000120868|O14727-4|APAF1;nc|ENSG00000120868|O14727-5|APAF1;nc|ENSG00000120868|O14727-6|APAF1	56.72105179125745	0.5342425954139568	1				NaN	NaN	0	NaN	1294	3013	4303
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4310	17.785	NaN	2993.2	30	0	329.94	0.036	+			9085	EGIESGDPGTD	11	60	538.7229002344935	1075.431247535787	2	538.723388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EGIESGDPGTD_	ENSG00000198363|ENST00000379454|ASPH;nc|ENSG00000198363|Q12797-10|ASPH	39.252832667884924	0.5681665794958463	1				NaN	NaN	0	NaN	1295	3013	4303
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4320	17.807	NaN	1431.1	30	0	188.73	0.214			+	13629	GMGPGVKK	8	39	387.2204764633556	772.4263999935113	2	387.22052001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GMGPGVKK_	REV__ENST00000465814.5_1_11:72423956-72425365:-|nuORF	35.200714571348534	0.6875396545722289	1				NaN	NaN	0	NaN	1302	3016	4319
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4321	17.811	NaN	3878.3	30	0	583.48	0.106	+			25712	LRNVSTGD	8	52	431.2248754934697	860.4351980537394	2	431.22479248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LRNVSTGD_	CON__P13645;ENSG00000186395|ENST00000269576|KRT10	90.36981228632155	0.27635063874291205	1				NaN	NaN	0	NaN	1303	3016	4319
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4322	17.813	NaN	2205.5	30	0	276.82	0.106	+			20372	KESTITRKL	9	59	538.3276248281373	NaN	0	538.3275756835938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KESTITRKL_	ENSG00000164687|ENST00000297258|FABP5;ENST00000477993.1_1_7:152139729-152140032:+|nuORF;nc|ENSG00000293165|A8MUU1|FABP5P3	56.43379154798735	0.16452882468284893	1				NaN	NaN	0	NaN	1304	3016	4319
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4323	17.815	NaN	1144.3	30	0	222.25	0.106	+			50162	WLAEVNGKK	9	42	522.7935791015625	NaN	0	522.7935791015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_WLAEVNGKK_	ENSG00000107554|ENST00000324109|DNMBP;nc|ENSG00000107554|Q6XZF7-2|DNMBP	30.317721548370564	0.32449924987115025	1				NaN	NaN	0	NaN	1305	3016	4319
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4324	17.816	NaN	3087.3	30	0	339.46	0.106	+			44579	TTCEQIVRK	9	68	567.800035615787	1133.585518298374	2	567.8012084960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_TTC(Carbamidomethyl (C))EQIVRK_	ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1;nc|ENSG00000125107|A5YKK6-4|CNOT1	75.04331003522576	0.118981335847003	1				NaN	NaN	0	NaN	1306	3016	4319
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4325	17.818	NaN	2928.1	30	0	277.37	0.036			+	-1	REMHIIQI	8	57	541.2951738935832	1080.5757948539663	2	542.2991943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))REMHIIQI_	REV__DDI1|p.L74Yfs*21|1|0.29|ENSG00000170967|chr11:104037040-104037040|T/-|frameshift_variant;REV__DDI1|p.V42I|1|0.58|ENSG00000170967|chr11:104036946-104036946|G/A|missense_variant;REV__ENSG00000170967|ENST00000302259|DDI1	30.503639358989545	0.7238069182250283	1				NaN	NaN	0	NaN	1307	3016	4319
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4326	17.819	NaN	1221	30	0	246.92	0.144	+			3605	ASVQVLNKW	9	34	348.8648681640625	NaN	0	348.8648681640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASVQVLNKW_	ANKRD27|p.R875W|1|0.3|ENSG00000105186|chr19:32604295-32604295|G/A|missense_variant	24.20275056022122	0.35506675290109213	1				NaN	NaN	0	NaN	1308	3016	4319
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4337	17.846	NaN	87393	30	0	13507	0.198			+	38123	SPVVLQNDR	9	111	514.2803179957946	1026.546083058389	2	514.2803344726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SPVVLQNDR_	REV__ENSG00000232810|ENST00000449264|TNF	107.00750918261382	0.032051501805654005	1				NaN	NaN	0	NaN	1316	3019	4336
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4338	17.849	NaN	9128.3	30	0	781.49	0.106	+			4823	ATNYITRNK	9	69	540.7939092819294	NaN	0	540.7938232421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATNYITRNK_	ENSG00000100029|ENST00000354694|PES1;ENST00000466614.1_1_22:30983271-30987820:-|nuORF;nc|ENSG00000100029|O00541-2|PES1	123.20810148215591	0.0016355521601317592	1				NaN	NaN	0	NaN	1317	3019	4336
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4339	17.851	NaN	21721	30	0	6861.6	0.106			+	38973	SSRSVQPAPV	10	60	343.1891089914858	1026.5454975746575	3	343.1890869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSRSVQPAPV_	REV__ENST00000572565.5_1_19:52206171-52206489:+|nuORF	41.42661286455405	0.5359995577334734	1				NaN	NaN	0	NaN	1318	3019	4336
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4340	17.853	NaN	4147	30	0	550.93	0.106	+			40215	STSDSVRLK	9	62	496.77204693209006	991.5295409309801	2	496.77197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STSDSVRLK_	ENSG00000187735|ENST00000521604|TCEA1;ENST00000521086.6_1_8:54891227-54912595:-|nuORF;ENST00000522397.5_1_8:54883012-54934915:-|nuORF;nc|ENSG00000187735|P23193-2|TCEA1	127.46168284122857	0.016682644177004526	1				NaN	NaN	0	NaN	1319	3019	4336
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4341	17.855	NaN	5087.6	30	0	768.16	0.106				-1	EKSPVMTPF	9	56	526.2594496651749	1050.5043463971497	2	526.259521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_EKSPVM(Oxidation (M))TPF_	ENSG00000064042|ENST00000503057|LIMCH1;LIMCH1|p.K805Rfs*20|1|0.37|ENSG00000064042|chr4:41680049-41680049|A/-|frameshift_variant;LIMCH1|p.T960Pfs*48|1|0.18|ENSG00000064042|chr4:41685768-41685768|A/-|frameshift_variant;nc|ENSG00000064042|Q9UPQ0-10|LIMCH1;nc|ENSG00000064042|Q9UPQ0-3|LIMCH1;nc|ENSG00000064042|Q9UPQ0-4|LIMCH1;nc|ENSG00000064042|Q9UPQ0-5|LIMCH1;nc|ENSG00000064042|Q9UPQ0-6|LIMCH1;nc|ENSG00000064042|Q9UPQ0-8|LIMCH1;nc|ENSG00000064042|Q9UPQ0-9|LIMCH1	55.50420428727701	0.2510918378945873	1				NaN	NaN	0	NaN	1320	3019	4336
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4342	17.856	NaN	1351	30	0	401.34	0.106			+	26566	LTSSSALKK	9	48	467.7818603515625	NaN	0	467.7818603515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LTSSSALKK_	REV__PIK3CB|p.T930Lfs*62|1|0.47|ENSG00000051382|chr3:138663914-138663914|T/-|frameshift_variant	35.61828744233558	0.29773779453147337	1				NaN	NaN	0	NaN	1321	3019	4336
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4343	17.858	NaN	2786.4	30	0	319.67	0.034	+			17385	IAMGTLLLGA	10	61	488.28238726489616	974.5502215965923	2	488.28204345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_IAM(Oxidation (M))GTLLLGA_	tr|U7SJ75|U7SJ75_FUSNUMultidrugexportproteinMepAOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02134PE=3SV=1	55.50420428727701	0.4067289358710215	1				NaN	NaN	0	NaN	1322	3019	4336
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4354	17.884	NaN	8969.8	30	0	2717	0.214	+			40711	SVCGKGFSR	9	65	499.24773754751806	996.4809221618361	2	499.2477111816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SVC(Carbamidomethyl (C))GKGFSR_	ENSG00000136451|ENST00000581208|VEZF1;ENST00000423931.1_1_3:192873384-192874521:-|nuORF	86.88156770896713	0.07365720931774442	1				NaN	NaN	0	NaN	1330	3022	4353
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4355	17.888	NaN	13913	30	0	1777.5	0.106	+			5854	AVIQGQAVRK	10	77	535.3275320023714	1068.6405110715427	2	535.3278198242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVIQGQAVRK_	ENSG00000099812|ENST00000215582|MISP	143.37361013837676	0.009854612225601756	1				NaN	NaN	0	NaN	1331	3022	4353
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4356	17.89	NaN	4774.3	30	0	2715.8	0.106				-1	 	0	32	333.16744053083147	332.1601640642315	1	333.1676025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	1332	3022	4353
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4357	17.891	NaN	3595.7	30	0	599.19	0.106	+			1857	AILDKTTNK	9	67	502.2919314102039	1002.5693098872079	2	502.29248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AILDKTTNK_	ENSG00000076067|ENST00000262031|RBMS2;ENSG00000153250|ENST00000348849|RBMS1;nc|ENSG00000153250|P29558-2|RBMS1	109.82975700811294	0.02917171107062681	1				NaN	NaN	0	NaN	1333	3022	4353
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4358	17.893	NaN	712.93	30	0	129.67	0.106			+	2485	APPSSALAR	9	33	435.24560546875	NaN	0	435.24560546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_APPSSALAR_	REV__MBD1|p.P310S|1|0.24|ENSG00000141644|chr18:50275027-50275027|G/A|missense_variant	37.15910966729921	0.2899585034171616	1				NaN	NaN	0	NaN	1334	3022	4353
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4359	17.895	NaN	1901	30	0	396.85	0.106			+	6752	CDTIKRIK	8	35	326.1921258518232	NaN	0	325.85736083984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_CDTIKRIK_	REV__ENSG00000110719|ENST00000265686|TCIRG1;REV__nc|ENSG00000110719|Q13488-2|TCIRG1	19.359975847455235	1.7418937515398478	1				NaN	NaN	0	NaN	1335	3022	4353
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4360	17.897	NaN	423.39	30	0	101.28	0.032				-1	IATTMTDSFLT	11	23	406.19720458984375	NaN	0	406.19720458984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_IATTM(Oxidation (M))TDSFLT_	ENSG00000161513|ENST00000293195|FDXR;ENST00000577509.5_1_17:72858941-72868963:-|nuORF;ENST00000579482.5_1_17:72858941-72860228:-|nuORF;nc|ENSG00000161513|P22570-2|FDXR;nc|ENSG00000161513|P22570-3|FDXR;nc|ENSG00000161513|P22570-4|FDXR;nc|ENSG00000161513|P22570-5|FDXR;nc|ENSG00000161513|P22570-6|FDXR;nc|ENSG00000161513|P22570-7|FDXR;nc|ENSG00000161513|P22570|FDXR	14.086013023434994	0.456735970842152	1				NaN	NaN	0	NaN	1336	3022	4353
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4372	17.923	NaN	56776	30	0	5992.2	0.214	+			5293	ATVITTEKR	9	98	509.7983673750275	1017.582181816855	2	509.7981262207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATVITTEKR_	ENSG00000146555|ENST00000404826|SDK1;ENST00000476701.5_1_7:4169443-4308379:+|nuORF;nc|ENSG00000146555|Q7Z5N4-3|SDK1;SDK1|p.Q1487Pfs*37|1|0.27|ENSG00000146555|chr7:4149293-4149294|-/C|frameshift_variant;SDK1|p.V1762Wfs*2|1|0.28|ENSG00000146555|chr7:4208168-4208168|G/-|frameshift_variant	195.06343300570734	5.420119182691198E-05	1				NaN	NaN	0	NaN	1345	3025	4371
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4373	17.927	NaN	31089	30	0	10769	0.106	+			38339	SRKTATEII	9	55	340.201063530429	1017.5813611914871	3	340.2011413574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SRKTATEII_	tr|U7SQY2|U7SQY2_FUSNUPhophatidylinositol-4-phosphate5-kinaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01627PE=4SV=1	20.94693142431847	0.6074874384046576	1				NaN	NaN	0	NaN	1346	3025	4371
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4374	17.929	NaN	4339	30	0	678.12	0.106			+	47086	VLKGTSNK	8	49	423.7556995506361	845.4968461680722	2	423.7556457519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VLKGTSNK_	REV__ENSG00000185920|ENST00000331920|PTCH1;REV__ENST00000488809.2_1_9:98242249-98242363:-|nuORF;REV__nc|ENSG00000185920|Q13635-2|PTCH1;REV__nc|ENSG00000185920|Q13635-3|PTCH1;REV__nc|ENSG00000185920|Q13635-4|PTCH1;REV__PTCH1|p.P593Lfs*30|1|0.34|ENSG00000185920|chr9:95469884-95469884|A/-|frameshift_variant;REV__PTCH1|p.R1308Efs*64|1|0.24|ENSG00000185920|chr9:95447335-95447335|G/-|frameshift_variant;REV__PTCH1|p.S1203Afs*52|2|0.47|ENSG00000185920|chr9:95449267-95449267|G/-|frameshift_variant;REV__PTCH1|p.Y1316Tfs*56|3|0.29|ENSG00000185920|chr9:95447311-95447311|G/-|frameshift_variant	65.80317337860623	0.44433089765398776	1				NaN	NaN	0	NaN	1347	3025	4371
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4375	17.93	NaN	8939.7	30	0	3234.1	0.106	+			38766	SSLSTEAS	8	53	391.18232847715205	780.3501040211041	2	391.18231201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSLSTEAS_	nc|ENSG00000229809|P0C7X2-5|ZNF688	33.51558372728122	0.7005509609380386	1				NaN	NaN	0	NaN	1348	3025	4371
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4376	17.932	NaN	2230.4	30	0	424.3	0.106	+			47090	VLKTSAGLGLS	11	68	523.3164544050052	NaN	0	523.31640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VLKTSAGLGLS_	ENSG00000133401|ENST00000438447|PDZD2;ENST00000513490.1_1_5:32100951-32108238:+|nuORF;ENST00000515115.5_1_5:32098703-32108238:+|nuORF;nc|ENSG00000133401|O15018-2|PDZD2;PDZD2|p.D2774Rfs*7|1|0.29|ENSG00000133401|chr5:32101201-32101202|-/G|frameshift_variant;PDZD2|p.S2770Gfs*12|1|0.04|ENSG00000133401|chr5:32101193-32101194|-/GGGT|frameshift_variant	65.46538089061403	0.1803543755190073	1				NaN	NaN	0	NaN	1349	3025	4371
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4377	17.934	NaN	1323	30	0	321.37	0.106	+			6560	AYKKTSETL	9	40	520.7846040479453	1039.5546551626906	2	520.7852783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AYKKTSETL_	ENSG00000076554|ENST00000518937|TPD52;ENST00000521354.5_1_8:80950353-81083761:-|nuORF;ENST00000522364.5_1_8:80963727-80992703:-|nuORF;nc|ENSG00000076554|P55327-2|TPD52;nc|ENSG00000076554|P55327-3|TPD52;nc|ENSG00000076554|P55327-5|TPD52;nc|ENSG00000076554|P55327-6|TPD52;nc|ENSG00000076554|P55327-7|TPD52;nc|ENSG00000076554|P55327|TPD52;TPD52|p.K164Sfs*5|1|0.09|ENSG00000076554|chr8:80051542-80051542|T/-|frameshift_variant	40.77816245573522	0.41113185337114944	1				NaN	NaN	0	NaN	1350	3025	4371
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4378	17.936	NaN	6711.9	30	0	1542.2	0.033	+			16342	HEKVANGL	8	57	434.2375976739801	866.4606424147602	2	434.2376403808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HEKVANGL_	ENSG00000125991|ENST00000348547|ERGIC3;ENST00000488384.1_1_20:34144716-34145272:+|nuORF;nc|ENSG00000125991|Q9Y282-3|ERGIC3	119.55681237560556	0.2351890295295504	1				NaN	NaN	0	NaN	1351	3025	4371
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4392	17.964	NaN	6547.4	30	0	795.88	0.214	+			5806	AVIEHLKQK	9	65	533.3244801202233	1064.6344073072464	2	533.3246459960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVIEHLKQK_	BPTF|p.D2844Afs*20|1|0.08|ENSG00000171634|chr17:67959766-67959767|-/C|frameshift_variant;BPTF|p.K2718Nfs*36|3|0.12|ENSG00000171634|chr17:67948150-67948150|A/-|frameshift_variant;ENSG00000171634|ENST00000306378|BPTF;nc|ENSG00000171634|Q12830-4|BPTF;nc|ENSG00000171634|Q12830|BPTF	126.24258497203832	0.01742065577488747	1				NaN	NaN	0	NaN	1362	3028	4391
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4393	17.968	NaN	4586.3	30	0	2291.6	0.106	+			32252	QTLDKVVRK	9	43	543.8352361250321	1085.6559193168641	2	543.8359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QTLDKVVRK_	ENSG00000102893|ENST00000323584|PHKB;nc|ENSG00000102893|Q93100-2|PHKB;nc|ENSG00000102893|Q93100-3|PHKB;nc|ENSG00000102893|Q93100-4|PHKB;PHKB|p.G644Efs*2|1|0.12|ENSG00000102893|chr16:47650874-47650874|A/-|frameshift_variant;PHKB|p.L392*|1|0.37|ENSG00000102893|chr16:47594182-47594182|T/-|frameshift_variant;PHKB|p.N422Ifs*52|1|0.46|ENSG00000102893|chr16:47596427-47596427|A/-|frameshift_variant	19.1035232394073	0.6112419832031293	1				NaN	NaN	0	NaN	1363	3028	4391
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4394	17.97	NaN	5129.1	30	0	834.03	0.106	+			2672	AQNEPLTQK	9	72	514.7725476747895	1027.530542416379	2	514.772705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AQNEPLTQK_	ENSG00000156304|ENST00000286835|SCAF4;ENST00000467731.1_1_21:33057290-33073360:-|nuORF;nc|ENSG00000156304|O95104-2|SCAF4;nc|ENSG00000156304|O95104-3|SCAF4;SCAF4|p.E653Qfs*24|1|0.4|ENSG00000156304|chr21:31688393-31688394|-/TG|frameshift_variant;SCAF4|p.V1113Cfs*7|1|0.22|ENSG00000156304|chr21:31671506-31671506|C/-|frameshift_variant	83.6470233535746	0.08277643980271215	1				NaN	NaN	0	NaN	1364	3028	4391
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4395	17.972	NaN	5694	30	0	1078.8	0.106			+	-1	KNPYWISCSEE	11	50	706.8108529732344	1411.6071530132688	2	706.8110961914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_KNPYWISC(Carbamidomethyl (C))SEE_	REV__ASTN1|p.L945Pfs*9|1|0.49|ENSG00000152092|chr1:176894668-176894669|-/G|frameshift_variant;REV__ENSG00000152092|ENST00000361833|ASTN1;REV__nc|ENSG00000152092|O14525-3|ASTN1;REV__nc|ENSG00000152092|O14525|ASTN1	31.529811441608018	0.6590691889962369	1				NaN	NaN	0	NaN	1365	3028	4391
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4396	17.974	NaN	2159.1	30	0	604.38	0.106	+			19206	KAAEVLKVQK	10	45	557.352980935333	1112.691408937466	2	557.353759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KAAEVLKVQK_	ENSG00000112242|ENST00000346618|E2F3;nc|ENSG00000112242|O00716-2|E2F3	44.639436926238396	0.506394993251866	1				NaN	NaN	0	NaN	1366	3028	4391
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4397	17.975	NaN	1126.4	30	0	177.78	0.034	+			21310	KLSTHHPR	8	42	488.2771301269531	NaN	0	488.2771301269531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KLSTHHPR_	ENST00000268058.7_1_15:74337464-74337578:+|nuORF	25.450171626174864	1.7418937515398478	1				NaN	NaN	0	NaN	1367	3028	4391
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4398	17.976	NaN	1361.8	30	0	262.08	0.14			+	20341	KERQEDLE	8	37	523.7578125	NaN	0	523.7578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KERQEDLE_	REV__ENSG00000160796|ENST00000450053|NBEAL2;REV__nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2;REV__nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2	37.15910966729921	1.7418937515398478	1				NaN	NaN	0	NaN	1368	3028	4391
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4410	18.004	NaN	6278.6	30	0	1379.4	0.214	+			49094	VVLENAAKK	9	64	486.29759368974794	970.5806344462959	2	486.297607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVLENAAKK_	ENSG00000171824|ENST00000376936|EXOSC10;ENST00000474216.5_1_1:11126777-11137033:-|nuORF;nc|ENSG00000171824|Q01780-2|EXOSC10	107.00750918261382	0.032051501805654005	1				NaN	NaN	0	NaN	1377	3031	4409
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4411	18.007	NaN	4550.8	30	0	590.96	0.106	+			7693	DLLHRVKPA	9	66	524.8167576334715	1047.618962333743	2	524.8170166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DLLHRVKPA_	ENSG00000135686|ENST00000564996|KLHL36;KLHL36|p.G345Afs*39|1|0.21|ENSG00000135686|chr16:84657836-84657836|G/-|frameshift_variant;KLHL36|p.G451Afs*29|1|0.24|ENSG00000135686|chr16:84661629-84661629|G/-|frameshift_variant;nc|ENSG00000135686|Q8N4N3-2|KLHL36	85.16082228582465	0.07850854922700509	1				NaN	NaN	0	NaN	1378	3031	4409
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4412	18.009	NaN	3394	30	0	342.97	0.106	+			40411	STVGSAISRK	10	63	503.2883002978569	NaN	0	503.2882995605469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STVGSAISRK_	ENSG00000101150|ENST00000346249|TPD52L2;nc|ENSG00000101150|O43399-2|TPD52L2;nc|ENSG00000101150|O43399-3|TPD52L2;nc|ENSG00000101150|O43399-4|TPD52L2;nc|ENSG00000101150|O43399-5|TPD52L2;nc|ENSG00000101150|O43399-6|TPD52L2;nc|ENSG00000101150|O43399-7|TPD52L2	88.17693792209575	0.06076230397739847	1				NaN	NaN	0	NaN	1379	3031	4409
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4413	18.011	NaN	9823.3	30	0	1690.4	0.106	+			8874	EERRVKEVV	9	42	381.8874840885471	1142.6406228658414	3	381.8874816894531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EERRVKEVV_	ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88813329-88813827:+|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P	35.61828744233558	0.47037581924408073	1				NaN	NaN	0	NaN	1380	3031	4409
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4414	18.013	NaN	1930.4	30	0	587.92	0.106			+	31986	QRELGFVRK	9	40	566.8346023009226	1131.654651668645	2	567.3359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QRELGFVRK_	REV__NCKAP5L|p.D92G|1|0.57|ENSG00000167566|chr12:49801924-49801924|T/C|missense_variant	21.68575002086885	0.60058278597072	1				NaN	NaN	0	NaN	1381	3031	4409
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4415	18.015	NaN	1965.1	30	0	261.49	0.106	+			21164	KKVLSVEGP	9	44	478.79179640748976	955.5690398817795	2	478.79010009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KKVLSVEGP_	CON__Q2HJF0	42.396135135203025	0.392153681582562	1				NaN	NaN	0	NaN	1382	3031	4409
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4416	18.016	NaN	4287.7	30	0	869.18	0.036			+	20761	KHIEVRQVV	9	59	554.3350586514936	1106.655564369787	2	554.3359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KHIEVRQVV_	REV__ENSG00000213977|ENST00000225525|TAX1BP3	64.20726635412375	0.17854274437659667	1				NaN	NaN	0	NaN	1383	3031	4409
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4428	18.042	NaN	7517.8	30	0	1327.8	0.214	+			682	AEAKKIERL	9	71	529.322246134819	1056.629939336438	2	529.3224487304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEAKKIERL_	ENSG00000183520|ENST00000373014|UTP11;ENST00000488453.1_1_1:38483328-38489297:+|nuORF;nc|ENSG00000183520|Q9Y3A2-2|UTP11	75.04331003522576	0.118981335847003	1				NaN	NaN	0	NaN	1392	3034	4427
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4429	18.045	NaN	2132.8	30	0	1232.3	0.106			+	-1	RLQCPICAH	9	29	549.2714963287116	1096.528439724223	2	549.271728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_RLQC(Carbamidomethyl (C))PICAH_	REV__ENSG00000048462|ENST00000053243|TNFRSF17;REV__nc|ENSG00000048462|Q02223-2|TNFRSF17;REV__TNFRSF17|p.L76Ffs*8|1|0.39|ENSG00000048462|chr16:11966286-11966287|-/T|frameshift_variant	19.359975847455235	0.6112419832031293	1				NaN	NaN	0	NaN	1393	3034	4427
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4430	18.047	NaN	1177	30	0	232.36	0.106	+			22137	KSPRSPQL	8	38	456.76648268529914	911.5184124373983	2	456.7666931152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KSPRSPQL_	ENSG00000165480|ENST00000314759|SKA3;ENST00000298260.8_1_13:21729833-21750660:-|nuORF;nc|ENSG00000165480|Q8IX90-3|SKA3	37.15910966729921	0.6739408393984688	1				NaN	NaN	0	NaN	1394	3034	4427
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4431	18.049	NaN	2168.2	30	0	540.06	0.106			+	37830	SMVASMIG	8	38	398.1901506673024	794.3657484014049	2	398.19000244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SMVASMIG_	REV__ENST00000559115.5_1_14:24592905-24593049:+|nuORF	26.79610172149135	0.7524337208463756	1				NaN	NaN	0	NaN	1395	3034	4427
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4432	18.051	NaN	759.45	30	0	208.07	0.106	+			24977	LLDDGHKK	8	31	463.25836181640625	NaN	0	463.25836181640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LLDDGHKK_	ENSG00000140199|ENST00000354181|SLC12A6;nc|ENSG00000140199|Q9UHW9-2|SLC12A6;nc|ENSG00000140199|Q9UHW9-4|SLC12A6;nc|ENSG00000140199|Q9UHW9-5|SLC12A6;SLC12A6|p.L206Ffs*39|1|0.13|ENSG00000140199|chr15:34257714-34257715|-/A|frameshift_variant;SLC12A6|p.L206Yfs*28|2|0.35|ENSG00000140199|chr15:34257715-34257715|A/-|frameshift_variant;SLC12A6|p.Q184Kfs*19|1|0.62|ENSG00000140199|chr15:34257782-34257782|G/-|frameshift_variant;SLC12A6|p.S383Nfs*9|1|0.06|ENSG00000140199|chr15:34252357-34252358|-/TACTTTGTTC|frameshift_variant;SLC12A6|p.Y294Lfs*14|1|0.12|ENSG00000140199|chr15:34254585-34254586|-/GTGAACA|frameshift_variant	19.359975847455235	1.7418937515398478	1				NaN	NaN	0	NaN	1396	3034	4427
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4433	18.053	NaN	2486.9	30	0	325.81	0.106	+			39036	SSSMNPTETK	10	55	541.2447092629698	1080.4748655927394	2	541.2443237304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSSMNPTETK_	CAST|p.E474Kfs*10|1|0.39|ENSG00000153113|chr5:96754695-96754695|A/-|frameshift_variant;ENSG00000153113|ENST00000675179|CAST;ENST00000507487.5_1_5:95998126-96062463:+|nuORF;nc|ENSG00000153113|P20810-10|CAST;nc|ENSG00000153113|P20810-5|CAST;nc|ENSG00000153113|P20810-7|CAST;nc|ENSG00000153113|P20810-9|CAST	56.632244143249146	0.3964695498866976	1				NaN	NaN	0	NaN	1397	3034	4427
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4434	18.055	NaN	2274.6	30	0	355.94	0.038	+			20180	KEKYEKDIAA	10	33	597.8219551958296	1193.629357458459	2	597.8219604492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KEKYEKDIAA_	ENSG00000164104|ENST00000296503|HMGB2;ENSG00000189403|ENST00000341423|HMGB1;ENST00000502313.1_1_5:77940194-77940227:-|nuORF;ENST00000522557.1_1_20:56063450-56063633:-|nuORF;nc|ENSG00000124097|B2RPK0|HMGB1P1	25.125986553469783	0.6746423231557295	1				NaN	NaN	0	NaN	1398	3034	4427
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4443	18.075	NaN	23729	30	0	3300.1	0.214	+			48155	VSYSHIQSK	9	78	524.7746761136459	1047.5347992940917	2	524.775146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSYSHIQSK_	ENSG00000047849|ENST00000683076|MAP4;nc|ENSG00000047849|P27816-2|MAP4;nc|ENSG00000047849|P27816-4|MAP4;nc|ENSG00000047849|P27816-6|MAP4;nc|ENSG00000047849|P27816|MAP4	186.41076107051632	0.0006524797715399015	1				NaN	NaN	0	NaN	1404	3037	4442
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4444	18.078	NaN	4810.1	30	0	1080	0.106	+			40724	SVCGKSFSR	9	62	514.2528442936276	1026.4911356540551	2	514.25341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SVC(Carbamidomethyl (C))GKSFSR_	ENSG00000278129|ENST00000621650|ZNF8	81.52500206392136	0.09095445986635249	1				NaN	NaN	0	NaN	1405	3037	4442
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4445	18.08	NaN	4203	30	0	1702.7	0.106			+	43497	TGQPKGFADK	10	36	350.18546786425975	1047.5345741929793	3	350.1852722167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TGQPKGFADK_	REV__ENST00000403509.1_1_6:54467537-54467825:-|nuORF	25.57405402267927	0.6709832231498071	1				NaN	NaN	0	NaN	1406	3037	4442
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4446	18.082	NaN	1415.9	30	0	230.87	0.106			+	-1	VHHEMGDLN	9	45	534.2344194150013	1066.4542858968025	2	534.2345581054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_VHHEM(Oxidation (M))GDLN_	REV__ACVR1B|p.T377Pfs*16|2|0.35|ENSG00000135503|chr12:51985337-51985337|G/-|frameshift_variant;REV__ENSG00000135503|ENST00000257963|ACVR1B;REV__nc|ENSG00000135503|P36896-2|ACVR1B;REV__nc|ENSG00000135503|P36896-3|ACVR1B;REV__nc|ENSG00000135503|P36896-4|ACVR1B;REV__nc|ENSG00000135503|P36896-5|ACVR1B	35.61828744233558	0.47037581924408073	1				NaN	NaN	0	NaN	1407	3037	4442
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4447	18.084	NaN	1610.4	30	0	270.71	0.106			+	22001	KSFNSHCHL	9	41	536.7542617853719	NaN	0	536.754150390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KSFNSHCHL_	REV__ENSG00000099840|ENST00000395301|IZUMO4;REV__ENST00000478879.5_1_19:2096872-2098127:+|nuORF;REV__ENST00000497445.5_1_19:2096872-2097684:+|nuORF;REV__ENST00000498554.5_1_19:2096914-2097955:+|nuORF;REV__ENST00000590985.2_1_19:2096914-2098127:+|nuORF;REV__ENST00000591894.5_1_19:2096998-2098450:+|nuORF;REV__nc|ENSG00000099840|Q1ZYL8-2|IZUMO4;REV__nc|ENSG00000099840|Q1ZYL8-3|IZUMO4;REV__nc|ENSG00000099840|Q1ZYL8-4|IZUMO4	19.996771675451527	0.3693019437812985	1				NaN	NaN	0	NaN	1408	3037	4442
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4448	18.086	NaN	983.03	30	0	218.42	0.032			+	42697	TDAGHSQL	8	39	414.6954548400552	NaN	0	414.69537353515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TDAGHSQL_	REV__ENSG00000165887|ENST00000370655|ANKRD2;REV__nc|ENSG00000165887|Q9GZV1-2|ANKRD2;REV__nc|ENSG00000165887|Q9GZV1|ANKRD2	35.61828744233558	1.7418937515398478	1				NaN	NaN	0	NaN	1409	3037	4442
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4459	18.111	NaN	6415.4	30	0	467.35	0.214	+			49539	VYAQKHQQL	9	72	557.8034785388965	1113.5924041445928	2	557.8042602539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYAQKHQQL_	ENSG00000197323|ENST00000358465|TRIM33;nc|ENSG00000197323|Q9UPN9-2|TRIM33;TRIM33|p.L700Efs*5|1|0.07|ENSG00000197323|chr1:114410281-114410282|-/CAGAATTCTCC|frameshift_variant	101.60071028292904	0.0375685401170269	1				NaN	NaN	0	NaN	1417	3040	4458
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4460	18.114	NaN	5614.5	30	0	1785.7	0.106	+			5135	ATSTGGIVNK	10	57	474.26125379330335	946.5079546534067	2	474.2608337402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATSTGGIVNK_	ENSG00000162174|ENST00000415229|ASRGL1;ENST00000534183.5_1_11:62105600-62156860:+|nuORF;nc|ENSG00000162174|Q7L266-2|ASRGL1	112.41091882917199	0.040839805697094264	1				NaN	NaN	0	NaN	1418	3040	4458
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4461	18.116	NaN	1047.9	30	0	281.46	0.106			+	35258	SALINKTK	8	33	437.77164616584673	873.5287393984935	2	437.77117919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SALINKTK_	REV__ENSG00000132915|ENST00000255266|PDE6A;REV__PDE6A|p.A811Gfs*10|1|0.37|ENSG00000132915|chr5:149863193-149863193|G/-|frameshift_variant;REV__PDE6A|p.R582Afs*19|1|0.45|ENSG00000132915|chr5:149886360-149886361|-/T|frameshift_variant	34.172542307311794	0.6954784234644539	1				NaN	NaN	0	NaN	1419	3040	4458
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4462	18.118	NaN	1127.4	30	0	179.8	0.106			+	44404	TSLPLFCIL	9	38	503.78789603182486	NaN	0	503.7874755859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TSLPLFCIL_	REV__ENST00000578804.5_2_17:62499940-62500153:-|nuORF	44.53106598305862	0.24438232876904814	1				NaN	NaN	0	NaN	1420	3040	4458
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4463	18.12	NaN	8688.5	30	0	2285.8	0.106			+	20631	KGGGHIKEHI	10	70	538.3033740733481	1074.592195213496	2	538.3034057617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KGGGHIKEHI_	REV__ENSG00000167384|ENST00000592529|ZNF180;REV__nc|ENSG00000167384|Q9UJW8-3|ZNF180;REV__nc|ENSG00000167384|Q9UJW8-4|ZNF180;REV__nc|ENSG00000167384|Q9UJW8|ZNF180	72.2432373244024	0.2589930451692646	1				NaN	NaN	0	NaN	1421	3040	4458
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4464	18.122	NaN	2961.2	30	0	344.95	0.036	+			34268	RTILSSTPVL	10	62	543.8284372771858	1085.6423216211715	2	543.8269653320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RTILSSTPVL_	ENSG00000169894|ENST00000379458|MUC3A;nc|ENSG00000169894|Q02505-2|MUC3A;nc|ENSG00000169894|Q02505-3|MUC3A;nc|ENSG00000169894|Q02505-4|MUC3A;nc|ENSG00000169894|Q02505-5|MUC3A	51.19269402634007	0.44601001148513897	1				NaN	NaN	0	NaN	1422	3040	4458
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4470	18.138	NaN	17394	30	0	4313.5	0.214	+			17800	IEVEDENDN	9	75	538.7231794322234	1075.4318059312468	2	538.7235107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IEVEDENDN_	CELSR1|p.G1602Vfs*104|1|0.17|ENSG00000075275|chr22:46410526-46410526|C/-|frameshift_variant;CELSR1|p.G614Afs*54|3|0.27|ENSG00000075275|chr22:46535330-46535330|C/-|frameshift_variant;CELSR1|p.I2650Sfs*5|1|0.42|ENSG00000075275|chr22:46369187-46369187|T/-|frameshift_variant;CELSR1|p.R2275Qfs*18|1|0.18|ENSG00000075275|chr22:46384603-46384604|-/G|frameshift_variant;CELSR1|p.T1849Rfs*8|2|0.25|ENSG00000075275|chr22:46397831-46397831|C/-|frameshift_variant;ENSG00000075275|ENST00000674500|CELSR1;nc|ENSG00000075275|Q9NYQ6-2|CELSR1;nc|ENSG00000075275|Q9NYQ6|CELSR1	64.20726635412375	0.17854274437659667	1				NaN	NaN	0	NaN	1425	3043	4469
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4471	18.142	NaN	7968.7	30	0	1181.5	0.106	+			13777	GQGVNNVPK	9	71	456.7483600121425	911.482167091085	2	456.7481994628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GQGVNNVPK_	ENSG00000179119|ENST00000336349|SPTY2D1;ENST00000536336.5_1_11:18633859-18655855:-|nuORF;nc|ENSG00000179119|Q68D10-2|SPTY2D1;nc|ENSG00000179119|Q68D10-3|SPTY2D1;SPTY2D1|p.P485Rfs*12|1|0.3|ENSG00000179119|chr11:18614820-18614820|G/-|frameshift_variant	143.10689835833298	0.00902249513149409	1				NaN	NaN	0	NaN	1426	3043	4469
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4472	18.143	NaN	1239.9	30	0	308.9	0.106			+	24112	LEKMMRIR	8	37	359.5393047317349	NaN	0	359.2044677734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LEKMMRIR_	REV__ENSG00000109674|ENST00000264596|NEIL3;REV__ENST00000513321.1_1_4:178231246-178274506:+|nuORF	38.80614096846853	1.7418937515398478	1				NaN	NaN	0	NaN	1427	3043	4469
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4473	18.145	NaN	1180.7	30	0	211.74	0.106	+			2256	ALVATPGKK	9	39	442.7816943297884	883.5488357263769	2	442.7813415527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ALVATPGKK_	ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232323706-232327997:-|nuORF	51.33545320467046	0.2872990594074956	1				NaN	NaN	0	NaN	1428	3043	4469
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4474	18.147	NaN	671.91	30	0	63.918	0.106			+	30281	PTGPVAPPPR	10	32	330.190185546875	NaN	0	330.190185546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PTGPVAPPPR_	REV__ENSG00000138942|ENST00000326132|RNF185;REV__nc|ENSG00000138942|Q96GF1-2|RNF185	20.83715455343099	0.4201028297492154	1				NaN	NaN	0	NaN	1429	3043	4469
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4475	18.149	NaN	1284.8	30	0	201.31	0.036	+			25261	LNLWQKME	8	37	531.2779259943937	NaN	0	531.2777099609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LNLWQKME_	SCAF4|p.N120Mfs*25|2|0.14|ENSG00000156304|chr21:31702342-31702342|T/-|frameshift_variant	33.51558372728122	1.7418937515398478	1				NaN	NaN	0	NaN	1430	3043	4469
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4481	18.165	NaN	2670.9	30	0	603.05	0.214			+	4860	ATPPLVERVP	10	38	360.213377155074	1077.618302065422	3	360.2135314941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATPPLVERVP_	REV__ENST00000399151.3_1_21:37571519-37572772:+|nuORF	29.170058357718403	0.6416167986984785	1				NaN	NaN	0	NaN	1433	3046	4480
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4482	18.169	NaN	1777.5	30	0	397.16	0.106			+	17038	HPVSASGP	8	32	376.1901937419991	750.3658345507982	2	376.1902160644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HPVSASGP_	REV__BCORL1|p.A1166Lfs*56|2|0.28|ENSG00000085185|chrX:130021034-130021034|G/-|frameshift_variant;REV__BCORL1|p.I1392Sfs*58|1|0.14|ENSG00000085185|chrX:130028726-130028726|G/-|frameshift_variant;REV__BCORL1|p.P1681Qfs*20|7|0.43|ENSG00000085185|chrX:130056036-130056036|C/-|frameshift_variant;REV__BCORL1|p.S324Ffs*96|1|0.31|ENSG00000085185|chrX:130013735-130013736|-/C|frameshift_variant;REV__ENSG00000085185|ENST00000540052|BCORL1;REV__nc|ENSG00000085185|Q5H9F3-1|BCORL1;REV__nc|ENSG00000085185|Q5H9F3-4|BCORL1	37.028477286268924	0.6747514403204248	1				NaN	NaN	0	NaN	1434	3046	4480
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4483	18.171	NaN	2679.6	30	0	1048	0.106	+			15783	GVTSLGLKQAL	11	40	362.8884012758589	1085.6433744277767	3	362.888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GVTSLGLKQAL_	ENSG00000186231|ENST00000369261|KLHL32;KLHL32|p.G405Afs*50|1|0.11|ENSG00000186231|chr6:97114365-97114365|G/-|frameshift_variant	26.69291269510374	0.70980431218767	1				NaN	NaN	0	NaN	1435	3046	4480
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4484	18.172	NaN	1243.7	30	0	458.09	0.034			+	9365	EIVTFALH	8	39	465.2562801375084	NaN	0	465.25579833984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EIVTFALH_	REV__CYP46A1|p.M316I|1|0.09|ENSG00000036530|chr14:99718094-99718094|G/A|missense_variant	33.51558372728122	1.7418937515398478	1				NaN	NaN	0	NaN	1436	3046	4480
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4490	18.189	NaN	1899	30	0	364.37	0.214	+			5907	AVLDKVKTK	9	46	501.3215074776571	1000.6284620221143	2	501.3213195800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVLDKVKTK_	ENSG00000051382|ENST00000674063|PIK3CB;PIK3CB|p.T930Lfs*62|1|0.47|ENSG00000051382|chr3:138663914-138663914|T/-|frameshift_variant	75.04331003522576	0.118981335847003	1				NaN	NaN	0	NaN	1439	3049	4489
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4491	18.192	NaN	5327.1	30	0	2569.6	0.106			+	37219	SKLSKVLVQ	9	44	334.5498852017806	1000.6278262055419	3	334.5497741699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SKLSKVLVQ_	REV__DST|p.K5076Nfs*24|1|0.31|ENSG00000151914|chr6:56472218-56472218|T/-|frameshift_variant;REV__DST|p.T4428Nfs*23|1|0.12|ENSG00000151914|chr6:56497896-56497897|-/T|frameshift_variant;REV__ENSG00000151914|ENST00000680361|DST;REV__nc|ENSG00000151914|Q03001-14|DST;REV__nc|ENSG00000151914|Q03001-8|DST;REV__nc|ENSG00000151914|Q03001|DST	27.882242232435846	0.5426732730940306	1				NaN	NaN	0	NaN	1440	3049	4489
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4492	18.194	NaN	1737.6	30	0	288.58	0.106	+			4041	ATDDYHYEK	9	50	571.2422465681378	1140.4699402030756	2	571.2423706054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATDDYHYEK_	ENSG00000136819|ENST00000372447|C9orf78	41.42661286455405	0.403525789677298	1				NaN	NaN	0	NaN	1441	3049	4489
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4493	18.196	NaN	1226.9	30	0	139.09	0.035			+	-1	QGVLAPQLC	9	42	493.25840167578957	984.5022504183792	2	493.2583312988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_QGVLAPQLC(Carbamidomethyl (C))_	REV__ENST00000564440.5_1_15:72491670-72491994:-|nuORF	38.80614096846853	0.43426287593479557	1				NaN	NaN	0	NaN	1442	3049	4489
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4500	18.214	NaN	2214.3	30	0	241.44	0.214			+	-1	KLVMVDEVL	9	54	531.3015442799222	1060.5885356266442	2	531.3013305664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_KLVM(Oxidation (M))VDEVL_	REV__ENSG00000054654|ENST00000555002|SYNE2;REV__ENST00000394768.6_2_14:64542710-64692241:+|nuORF;REV__nc|ENSG00000054654|Q8WXH0-13|SYNE2;REV__nc|ENSG00000054654|Q8WXH0-7|SYNE2;REV__nc|ENSG00000054654|Q8WXH0|SYNE2;REV__SYNE2|p.S6651Rfs*83|1|0.29|ENSG00000054654|chr14:64220596-64220597|-/G|frameshift_variant	30.503639358989545	0.5181749237905803	1				NaN	NaN	0	NaN	1446	3052	4499
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4501	18.217	NaN	1806	30	0	376.17	0.106	+			4226	ATGDLATSR	9	38	446.22983777543857	NaN	0	446.2297668457031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATGDLATSR_	ENSG00000167642|ENST00000301244|SPINT2;ENST00000590210.1_1_19:38755508-38778604:+|nuORF;nc|ENSG00000167642|O43291-2|SPINT2	80.45461616416974	0.0698259577396595	1				NaN	NaN	0	NaN	1447	3052	4499
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4502	18.219	NaN	2089.4	30	0	289.71	0.106				-1	RMAMAMRQK	9	58	577.784345956098	1153.554138978996	2	577.7852783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Oxidation (M)	_RM(Oxidation (M))AM(Oxidation (M))AMRQK_	ENSG00000127481|ENST00000375254|UBR4;nc|ENSG00000127481|Q5T4S7-2|UBR4;nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000127481|Q5T4S7-4|UBR4	37.15910966729921	0.4535818937225704	1				NaN	NaN	0	NaN	1448	3052	4499
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4503	18.221	NaN	1412.4	30	0	250.96	0.106			+	38975	SSRWSGVLV	9	42	495.7730696410593	989.5315863489186	2	495.7738037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSRWSGVLV_	REV__nc|ENSG00000197177|Q86SQ6-1|ADGRA1	19.359975847455235	0.6112419832031293	1				NaN	NaN	0	NaN	1449	3052	4499
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4504	18.223	NaN	1600.5	30	0	377.44	0.106	+			13088	GFVKVVKNK	9	52	509.8240892411165	1017.633625549033	2	509.8230895996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GFVKVVKNK_	ENSG00000122406|ENST00000370321|RPL5	55.50420428727701	0.2510918378945873	1				NaN	NaN	0	NaN	1450	3052	4499
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4505	18.225	NaN	1177	30	0	177.1	0.106	+			955	AEKAFQEGIAK	11	34	596.3215735042695	NaN	0	596.3211669921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEKAFQEGIAK_	BAZ1B|p.A1298Cfs*10|1|0.16|ENSG00000009954|chr7:73444083-73444084|-/G|frameshift_variant;ENSG00000009954|ENST00000339594|BAZ1B;nc|ENSG00000009954|Q9UIG0-2|BAZ1B	25.891714612410027	0.45002760985531187	1				NaN	NaN	0	NaN	1451	3052	4499
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4506	18.227	NaN	1178.4	30	0	81.179	0.036	+			43795	TLLGISESHQ	10	39	542.7848510742188	NaN	0	542.7848510742188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TLLGISESHQ_	ENSG00000197535|ENST00000399233|MYO5A;MYO5A|p.I1440Nfs*19|1|0.44|ENSG00000197535|chr15:52336477-52336478|-/T|frameshift_variant;nc|ENSG00000197535|Q9Y4I1-2|MYO5A;nc|ENSG00000197535|Q9Y4I1|MYO5A	31.529811441608018	0.39664753963064203	1				NaN	NaN	0	NaN	1452	3052	4499
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4511	18.241	NaN	8862.5	30	0	5952	0.214	+			32461	QVLGLHKQ	8	53	461.7769556958098	921.5393584584197	2	461.7768249511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QVLGLHKQ_	ENSG00000148482|ENST00000377369|SLC39A12;nc|ENSG00000148482|Q504Y0-3|SLC39A12;nc|ENSG00000148482|Q504Y0-4|SLC39A12;nc|ENSG00000148482|Q504Y0-5|SLC39A12	85.35947970620816	0.2915182781752196	1				NaN	NaN	0	NaN	1454	3055	4510
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4512	18.245	NaN	2792.5	30	0	613.77	0.106	+			34928	SAAGHVLVK	9	49	441.263849400358	880.5131458675161	2	441.2635498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAAGHVLVK_	ENSG00000183508|ENST00000369448|TENT5C	110.11987700582712	0.028875675806141952	1				NaN	NaN	0	NaN	1455	3055	4510
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4513	18.246	NaN	2930.9	30	0	793.07	0.106	+			45905	VAQGGGRAL	9	46	414.73784837251185	827.4611438118237	2	414.7377624511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VAQGGGRAL_	ENSG00000140553|ENST00000418476|UNC45A;ENST00000487875.5_1_15:91491769-91496943:+|nuORF;nc|ENSG00000140553|Q9H3U1-2|UNC45A	82.30502934623384	0.08758161712619916	1				NaN	NaN	0	NaN	1456	3055	4510
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4514	18.248	NaN	1332.9	30	0	165.15	0.106	+			15434	GTYSIGKEK	9	47	491.76336669921875	NaN	0	491.76336669921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTYSIGKEK_	DCLRE1A|p.V898Wfs*37|1|0.34|ENSG00000198924|chr10:113841535-113841535|T/-|frameshift_variant;ENSG00000198924|ENST00000361384|DCLRE1A	66.96192283764107	0.11962625698446946	1				NaN	NaN	0	NaN	1457	3055	4510
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4515	18.25	NaN	2550.4	30	0	611.95	0.106	+			11313	FKVRGIIVS	9	38	340.2185974121094	NaN	0	340.2185974121094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FKVRGIIVS_	ENSG00000204086|ENST00000373040|RPA4;RPA4|p.P62H|1|0.24|ENSG00000204086|chrX:96884495-96884495|C/A|missense_variant	25.450171626174864	0.34907449758287085	1				NaN	NaN	0	NaN	1458	3055	4510
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4516	18.252	NaN	1631.6	30	0	177.38	0.034	+			16529	HEVKKVTL	8	48	477.29264396834503	952.5707350034901	2	477.292236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HEVKKVTL_	ENSG00000100813|ENST00000605057|ACIN1;nc|ENSG00000100813|Q9UKV3-2|ACIN1;nc|ENSG00000100813|Q9UKV3-3|ACIN1;nc|ENSG00000100813|Q9UKV3-5|ACIN1;nc|ENSG00000100813|Q9UKV3|ACIN1	90.36981228632155	0.27635063874291205	1				NaN	NaN	0	NaN	1459	3055	4510
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4529	18.29	NaN	2019	30	0	304.3	0.213			+	37865	SNQWTKMAATV	11	44	626.8039247294954	1251.5932965257907	2	626.8040161132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_SNQWTKM(Oxidation (M))AATV_	REV__ENST00000324695.8_1_2:234873347-234879062:+|nuORF	56.43379154798735	0.3552884390983883	1				NaN	NaN	0	NaN	1466	3061	4528
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4530	18.294	NaN	1552.5	30	0	294.62	0.106	+			14397	GTALVGSQK	9	45	430.7449912783056	NaN	0	430.74481201171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTALVGSQK_	ENSG00000137309|ENST00000311487|HMGA1;ENST00000430198.2_1_4:73964637-73964859:+|nuORF;nc|ENSG00000137309|P17096-3|HMGA1	90.60085204095205	0.040385177724871185	1				NaN	NaN	0	NaN	1467	3061	4528
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4531	18.296	NaN	1962.5	30	0	312.61	0.106	+			15159	GTSGELSVKEK	11	54	567.8029366729323	1133.5913204126646	2	567.8031005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTSGELSVKEK_	ENSG00000173517|ENST00000682557|PEAK1;PEAK1|p.F1319Lfs*11|1|0.37|ENSG00000173517|chr15:77133125-77133125|A/-|frameshift_variant;PEAK1|p.N1433Tfs*19|1|0.1|ENSG00000173517|chr15:77115099-77115099|T/-|frameshift_variant;PEAK1|p.Q863Kfs*186|1|0.48|ENSG00000173517|chr15:77179340-77179340|G/-|frameshift_variant	55.08391021199286	0.3673379875553588	1				NaN	NaN	0	NaN	1468	3061	4528
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4532	18.297	NaN	1558.2	30	0	478	0.035	+			48631	VTSKVLTTK	9	47	488.80511868713415	NaN	0	488.80584716796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTSKVLTTK_	ENSG00000167632|ENST00000438773|TRAPPC9;ENST00000521667.5_1_8:140743306-141301208:-|nuORF;nc|ENSG00000167632|Q96Q05-2|TRAPPC9;nc|ENSG00000167632|Q96Q05-3|TRAPPC9	65.15724298150197	0.1273232316122292	1				NaN	NaN	0	NaN	1469	3061	4528
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4539	18.315	NaN	3251.3	30	0	486.53	0.143	+			4268	ATGGLEGKMK	10	66	496.26552209492615	990.5164912566523	2	496.2660827636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATGGLEGKMK_	AHNAK|p.I657Nfs*25|1|0.36|ENSG00000124942|chr11:62532447-62532448|-/T|frameshift_variant;AHNAK|p.K2311Rfs*11|1|0.33|ENSG00000124942|chr11:62527487-62527487|G/-|frameshift_variant;AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;AHNAK|p.L2124Ifs*37|1|0.04|ENSG00000124942|chr11:62528048-62528049|-/ATGCCTGATA|frameshift_variant;AHNAK|p.S1888Qfs*8|1|0.11|ENSG00000124942|chr11:62528755-62528756|-/G|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK	112.10723106719422	0.0417416748461292	1				NaN	NaN	0	NaN	1473	3064	4538
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4545	18.333	NaN	7935.1	30	0	1305.5	0.214	+			48591	VTQSEIAQK	9	72	502.2744285468388	1002.5343041604776	2	502.2744445800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTQSEIAQK_	ENSG00000197702|ENST00000334956|PARVA;ENST00000533345.5_1_11:12419899-12534890:+|nuORF	197.79262163027192	4.265587581223485E-05	1				NaN	NaN	0	NaN	1476	3067	4544
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4546	18.337	NaN	1314.1	30	0	146.35	0.106	+			38251	SQNGENFCK	9	46	542.2291531708871	NaN	0	542.2285766601562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SQNGENFC(Carbamidomethyl (C))K_	ENSG00000163072|ENST00000317647|NOSTRIN;nc|ENSG00000163072|Q8IVI9-2|NOSTRIN;nc|ENSG00000163072|Q8IVI9-4|NOSTRIN;NOSTRIN|p.K461Rfs*5|1|0.24|ENSG00000163072|chr2:168862044-168862044|A/-|frameshift_variant;NOSTRIN|p.L407*|1|0.21|ENSG00000163072|chr2:168860830-168860830|T/-|frameshift_variant;NOSTRIN|p.N191Kfs*36|1|0.15|ENSG00000163072|chr2:168843052-168843053|-/A|frameshift_variant;NOSTRIN|p.N191Tfs*9|1|0.33|ENSG00000163072|chr2:168843053-168843053|A/-|frameshift_variant	67.49366992349736	0.1173583512313808	1				NaN	NaN	0	NaN	1477	3067	4544
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4547	18.339	NaN	2525.4	30	0	702.28	0.036			+	21367	KMEPNNTIGL	10	57	558.7891698996563	1115.5637868661124	2	558.7898559570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KMEPNNTIGL_	REV__ENSG00000187612|ENST00000344514|OR5W2	42.86426827375447	0.522752283233888	1				NaN	NaN	0	NaN	1478	3067	4544
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4556	18.359	NaN	6845.2	30	0	1069.1	0.214	+			34382	RTSEIYVHR	9	70	580.811910273745	1159.6092676142898	2	580.8123168945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTSEIYVHR_	ENSG00000089737|ENST00000621632|DDX24;ENST00000555762.1_1_14:94517539-94521656:-|nuORF;nc|ENSG00000089737|Q9GZR7-2|DDX24	99.78786539795823	0.03941834715970116	1				NaN	NaN	0	NaN	1484	3070	4555
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4557	18.362	NaN	965.03	30	0	221.74	0.035	+			14303	GSYESTLKK	9	39	506.76913923773776	1011.5237255422755	2	506.76910400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSYESTLKK_	ENSG00000184898|ENST00000331426|RBM43	44.377184641726394	0.36891676396732553	1				NaN	NaN	0	NaN	1485	3070	4555
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4564	18.38	NaN	2610.6	30	0	386.66	0.214				-1	LSGGMKRKLS	10	43	364.87666890322606	NaN	0	364.8767395019531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LSGGM(Oxidation (M))KRKLS_	ABCA12|p.F2109Lfs*25|2|0.16|ENSG00000144452|chr2:214955268-214955268|A/-|frameshift_variant;ABCA12|p.N1671Kfs*2|1|0.24|ENSG00000144452|chr2:214978431-214978432|-/T|frameshift_variant;ABCA12|p.T1534Nfs*8|1|0.1|ENSG00000144452|chr2:214980622-214980623|-/T|frameshift_variant;ABCA12|p.Y2042Lfs*23|1|0.04|ENSG00000144452|chr2:214956772-214956773|-/G|frameshift_variant;ABCA2|p.G2110Afs*11|1|0.41|ENSG00000107331|chr9:137010217-137010217|C/-|frameshift_variant;ENSG00000107331|ENST00000341511|ABCA2;ENSG00000144452|ENST00000272895|ABCA12;ENST00000459850.5_1_9:139905575-139923366:-|nuORF;ENST00000487109.5_1_9:139906084-139911410:-|nuORF;nc|ENSG00000107331|Q9BZC7-2|ABCA2;nc|ENSG00000107331|Q9BZC7-4|ABCA2;nc|ENSG00000107331|Q9BZC7|ABCA2;nc|ENSG00000144452|Q86UK0-2|ABCA12	31.634271133179894	0.39630454568332174	1				NaN	NaN	0	NaN	1489	3073	4563
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4565	18.384	NaN	2132.1	30	0	261.05	0.106	+			40813	SVEEGEKVVK	10	57	552.3004574366422	1102.5863619400843	2	552.3009033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVEEGEKVVK_	ENSG00000133835|ENST00000510025|HSD17B4;ENST00000511186.5_1_5:118788168-118811542:+|nuORF;ENST00000515235.6_1_5:118788237-118827866:+|nuORF;HSD17B4|p.L703Ifs*15|1|0.06|ENSG00000133835|chr5:119536530-119536531|-/GAAAAATA|frameshift_variant;nc|ENSG00000133835|P51659-2|HSD17B4;nc|ENSG00000133835|P51659-3|HSD17B4	80.45461616416974	0.1919067876629769	1				NaN	NaN	0	NaN	1490	3073	4563
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4566	18.386	NaN	1926.1	30	0	605.73	0.035	+			26680	LVGRGTVKPA	10	37	333.2096213948562	996.6070347847685	3	333.2097473144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LVGRGTVKPA_	ENST00000540469.5_1_12:132195753-132196293:+|nuORF	33.921630207806714	0.6028135429846169	1				NaN	NaN	0	NaN	1491	3073	4563
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4573	18.404	NaN	4096.9	30	0	580.33	0.214	+			23349	KYTPPPHHI	9	65	545.295104988186	1088.575657043172	2	545.2959594726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KYTPPPHHI_	ENSG00000168653|ENST00000372969|NDUFS5	107.00750918261382	0.032051501805654005	1				NaN	NaN	0	NaN	1495	3076	4572
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4574	18.407	NaN	2245.6	30	0	1126.7	0.106				-1	 	0	36	334.7640430536499	667.5135331740998	2	334.76409912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	1496	3076	4572
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4575	18.409	NaN	1766.8	30	0	597.1	0.106				-1	VVGNWSLC	8	36	467.7273367349984	933.4401205367968	2	467.7273864746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_VVGNWSLC(Carbamidomethyl (C))_	ENSG00000142303|ENST00000597188|ADAMTS10;nc|ENSG00000142303|Q9H324-2|ADAMTS10;nc|ENSG00000142303|Q9H324|ADAMTS10	37.15910966729921	0.6739408393984688	1				NaN	NaN	0	NaN	1497	3076	4572
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4576	18.411	NaN	5671.5	30	0	1221.3	0.106	+			23350	KYTPPPHHI	9	51	363.86609762706655	1088.5764634813997	3	363.8659362792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KYTPPPHHI_	ENSG00000168653|ENST00000372969|NDUFS5	62.107414245175825	0.1960472003779324	1				NaN	NaN	0	NaN	1498	3076	4572
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4577	18.413	NaN	3009.3	30	0	302.57	0.106			+	15019	GTNGFISVVK	10	40	341.1938986934414	1020.5598666805242	3	341.19384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTNGFISVVK_	REV__ENSG00000165861|ENST00000556143|ZFYVE1;REV__nc|ENSG00000165861|Q9HBF4-3|ZFYVE1	24.519189625965996	0.6795976720565101	1				NaN	NaN	0	NaN	1499	3076	4572
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4578	18.415	NaN	1892.8	30	0	404.18	0.037	+			3334	ASMPDNTAAQK	11	53	567.2658727218558	1132.5171925105114	2	567.2664184570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASMPDNTAAQK_	ENSG00000100345|ENST00000216181|MYH9;ENSG00000133392|ENST00000300036|MYH11;MYH9|p.I784*|1|0.07|ENSG00000100345|chr22:36304036-36304036|G/-|frameshift_variant;nc|ENSG00000100345|P35579-2|MYH9;nc|ENSG00000133392|P35749-2|MYH11;nc|ENSG00000133392|P35749-3|MYH11;nc|ENSG00000133392|P35749-4|MYH11	28.081489160057373	0.6952392775027776	1				NaN	NaN	0	NaN	1500	3076	4572
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4585	18.433	NaN	3174.1	30	0	617.88	0.214				-1	 	0	35	342.20005549097266	1023.5783370731181	3	341.8656005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	1504	3079	4584
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4586	18.436	NaN	2407.8	30	0	413.54	0.036			+	28493	NGQRQILVK	9	46	352.5488285830397	1054.6246563493191	3	352.5487060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NGQRQILVK_	REV__ENSG00000166535|ENST00000299698|A2ML1	37.81151784470057	0.4459294069877048	1				NaN	NaN	0	NaN	1505	3079	4584
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4592	18.453	NaN	3724.8	30	0	467.58	0.214	+			15754	GVSQAMQQK	9	63	488.7471352986307	975.4797176640615	2	488.74725341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVSQAMQQK_	ENSG00000166398|ENST00000299505|GARRE1	80.45461616416974	0.09558281504443908	1				NaN	NaN	0	NaN	1508	3082	4591
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4593	18.456	NaN	966.89	30	0	349.24	0.106	+			4343	ATGPALDNK	9	31	443.73498984514544	NaN	0	443.73492431640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATGPALDNK_	ENSG00000196576|ENST00000359337|PLXNB2;PLXNB2|p.G308Vfs*83|1|0.39|ENSG00000196576|chr22:50289664-50289664|G/-|frameshift_variant;PLXNB2|p.G872Vfs*42|1|0.08|ENSG00000196576|chr22:50283401-50283401|C/-|frameshift_variant;PLXNB2|p.L1362Rfs*32|1|0.1|ENSG00000196576|chr22:50280578-50280579|CA/-|frameshift_variant;PLXNB2|p.V873Cfs*66|1|0.2|ENSG00000196576|chr22:50283400-50283401|-/C|frameshift_variant;PLXNB2|p.V928Cfs*3|1|0.71|ENSG00000196576|chr22:50283084-50283084|C/-|frameshift_variant	36.446750945000026	0.29355505452396785	1				NaN	NaN	0	NaN	1509	3082	4591
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4594	18.458	NaN	1070.2	30	0	282.73	0.035			+	35696	SDKATKLVL	9	34	325.5341766901678	NaN	0	325.5340576171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SDKATKLVL_	REV__nc|ENSG00000205464|Q52LC2|ATP6AP1L	30.503639358989545	0.3235605894931338	1				NaN	NaN	0	NaN	1510	3082	4591
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4603	18.478	NaN	3390.1	30	0	353.08	0.214	+			17658	IEKKATATI	9	55	487.79732420580933	973.5800954784187	2	487.79736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IEKKATATI_	ENSG00000084463|ENST00000261167|WBP11;ENST00000412499.1_1_2:128007051-128007162:+|nuORF	62.107414245175825	0.1960472003779324	1				NaN	NaN	0	NaN	1516	3085	4602
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4604	18.482	NaN	2366.8	30	0	221.91	0.106	+			40258	STSLLGQKK	9	53	481.28726297347947	960.559973013759	2	481.287353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STSLLGQKK_	ENSG00000115524|ENST00000335508|SF3B1;nc|ENSG00000115524|O75533-2|SF3B1;SF3B1|p.F815Lfs*19|1|0.14|ENSG00000115524|chr2:197401451-197401451|A/-|frameshift_variant	82.24051045832904	0.08786059719216216	1				NaN	NaN	0	NaN	1517	3085	4602
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4605	18.484	NaN	3711.1	30	0	456.32	0.106	+			39439	STEKIYIRK	9	62	569.3345578281117	1136.6545627230232	2	569.3353271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STEKIYIRK_	ENSG00000120798|ENST00000333003|NR2C1;ENSG00000177463|ENST00000425241|NR2C2;ENST00000475707.5_1_3:15045421-15079667:+|nuORF;nc|ENSG00000120798|P13056-2|NR2C1;nc|ENSG00000120798|P13056-3|NR2C1;nc|ENSG00000177463|P49116-2|NR2C2;NR2C2|p.F563Lfs*10|1|0.4|ENSG00000177463|chr3:15042899-15042899|T/-|frameshift_variant	41.080066990542036	0.4075906340427724	1				NaN	NaN	0	NaN	1518	3085	4602
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4606	18.485	NaN	2147.8	30	0	318.33	0.106			+	-1	ALDDMDLMH	9	50	538.7230645631471	1075.431576193094	2	538.7244262695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_ALDDM(Oxidation (M))DLMH_	REV__ENSG00000119231|ENST00000323460|SENP5;REV__nc|ENSG00000119231|Q96HI0-2|SENP5	24.20275056022122	0.577060078256802	1				NaN	NaN	0	NaN	1519	3085	4602
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4607	18.487	NaN	1364.1	30	0	207.77	0.035	+			2832	ASAGPPSLRK	10	46	492.2852417801524	982.5559306271048	2	492.28448486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASAGPPSLRK_	ENSG00000146463|ENST00000314607|ZMYM4;nc|ENSG00000146463|Q5VZL5-2|ZMYM4;nc|ENSG00000146463|Q5VZL5-3|ZMYM4;nc|ENSG00000146463|Q5VZL5-4|ZMYM4;ZMYM4|p.A956Sfs*68|1|0.38|ENSG00000146463|chr1:35393690-35393691|-/A|frameshift_variant;ZMYM4|p.D1229Ifs*2|1|0.12|ENSG00000146463|chr1:35405175-35405175|G/-|frameshift_variant;ZMYM4|p.N1222Kfs*15|1|0.25|ENSG00000146463|chr1:35405154-35405155|-/A|frameshift_variant	47.227680397652996	0.4825456260682108	1				NaN	NaN	0	NaN	1520	3085	4602
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4616	18.507	NaN	146640	30	0	37452	0.214	+			2970	ASFDKAKLK	9	92	336.5340967109813	1006.580460733144	3	336.5342712402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASFDKAKLK_	ENSG00000034510|ENST00000233143|TMSB10	54.776311868738084	0.25715957988447635	1				NaN	NaN	0	NaN	1526	3088	4615
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4617	18.511	NaN	1735.6	30	0	916.23	0.106	+			17484	ICVCVRFR	8	36	332.5137939453125	NaN	0	332.5137939453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ICVCVRFR_	ENST00000473798.1_1_1:762658-762772:-|nuORF	21.70233525837049	1.7418937515398478	1				NaN	NaN	0	NaN	1527	3088	4615
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4618	18.513	NaN	4466.3	30	0	916.42	0.106	+			39753	STITKAWKK	9	58	531.8182429620591	NaN	0	532.2666625976562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STITKAWKK_	ENSG00000180346|ENST00000603357|TIGD2	75.04331003522576	0.0883683072398826	1				NaN	NaN	0	NaN	1528	3088	4615
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4619	18.515	NaN	3294.2	30	0	721.56	0.037	+			7889	DRQTHEDEQ	9	43	579.2467041015625	NaN	0	579.2467041015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DRQTHEDEQ_	ENSG00000215853|ENST00000316073|RPTN	26.69291269510374	0.34280015626154364	1				NaN	NaN	0	NaN	1529	3088	4615
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4633	18.549	NaN	112150	30	0	49391	0.214	+			36508	SFDKAKLK	8	96	468.7792720418003	935.5439911504006	2	468.77886962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SFDKAKLK_	CON__P21752;ENSG00000034510|ENST00000233143|TMSB10	127.46168284122857	0.2238874366747666	1				NaN	NaN	0	NaN	1537	3094	4632
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4634	18.553	NaN	33913	30	0	13532	0.106	+			2971	ASFDKAKLK	9	68	504.2978569650715	1006.581160996943	2	504.29766845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASFDKAKLK_	ENSG00000034510|ENST00000233143|TMSB10	141.52041321563706	0.009766778904176347	1				NaN	NaN	0	NaN	1538	3094	4632
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4635	18.555	NaN	47341	30	0	19988	0.106				-1	KMVTLHRM	8	73	516.2771256417034	1030.5396983502067	2	516.2772827148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_KMVTLHRM(Oxidation (M))_	ENSG00000103051|ENST00000323786|COG4;ENST00000562200.5_1_16:70543798-70557434:-|nuORF;nc|ENSG00000103051|Q9H9E3-2|COG4;nc|ENSG00000103051|Q9H9E3|COG4	82.30502934623384	0.30436709589983096	1				NaN	NaN	0	NaN	1539	3094	4632
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4636	18.557	NaN	52156	30	0	24783	0.106	+			51454	YVGAAKLK	8	78	425.2632253308448	848.5118977284897	2	425.26300048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YVGAAKLK_	ENSG00000100938|ENST00000399440|GMPR2;ENSG00000137198|ENST00000259727|GMPR;ENST00000543191.5_1_6:16258277-16295414:+|nuORF;ENST00000544145.1_1_6:16289789-16295414:+|nuORF;nc|ENSG00000100938|Q9P2T1-2|GMPR2;nc|ENSG00000100938|Q9P2T1-3|GMPR2	101.21157088398209	0.2500103534009131	1				NaN	NaN	0	NaN	1540	3094	4632
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4637	18.559	NaN	16949	30	0	4962.3	0.035			+	-1	ASMLVLRLA	9	70	330.5309151945967	988.57091618399	3	330.530517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_ASM(Oxidation (M))LVLRLA_	REV__ENSG00000132153|ENST00000445061|DHX30;REV__nc|ENSG00000132153|Q7L2E3-2|DHX30;REV__nc|ENSG00000132153|Q7L2E3-3|DHX30	34.172542307311794	0.4838870758800184	1				NaN	NaN	0	NaN	1541	3094	4632
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4641	18.571	NaN	7914.1	30	0	3176.7	0.214				-1	 	0	48	344.52026974563364	1030.538979837101	3	344.5204162597656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	1542	3097	4640
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4642	18.575	NaN	10268	30	0	2021.5	0.106			+	17080	HRSYDEWL	8	53	553.2579941725907	1104.5014354119812	2	553.259033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HRSYDEWL_	REV__ATP10A|p.K791Rfs*28|1|0.23|ENSG00000206190|chr15:25708273-25708273|T/-|frameshift_variant;REV__ENSG00000206190|ENST00000555815|ATP10A;REV__nc|ENSG00000206190|O60312-2|ATP10A	30.503639358989545	0.7238069182250283	1				NaN	NaN	0	NaN	1543	3097	4640
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4643	18.577	NaN	7654.2	30	0	5024.6	0.106	+			28790	NPGQKGLGSPP	11	52	526.2800998317708	1050.5456467303416	2	526.2796020507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NPGQKGLGSPP_	nc|ENSG00000150401|Q6PH85-2|DCUN1D2	31.529811441608018	0.6590691889962369	1				NaN	NaN	0	NaN	1544	3097	4640
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4644	18.579	NaN	770.96	30	0	60.297	0.106	+			12329	GDIPKRQH	8	39	317.511220259462	949.5118313785861	3	317.5112609863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GDIPKRQH_	ENSG00000163406|ENST00000489711|SLC15A2;nc|ENSG00000163406|Q16348-2|SLC15A2;SLC15A2|p.N718Tfs*2|1|0.11|ENSG00000163406|chr3:121940965-121940965|G/-|frameshift_variant	19.359975847455235	0.7988239741663654	1				NaN	NaN	0	NaN	1545	3097	4640
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4645	18.58	NaN	6725.2	30	0	2547.6	0.106			+	-1	NQYCSSAQR	9	37	557.2397686983708	1112.4649844635414	2	557.24072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_NQYC(Carbamidomethyl (C))SSAQR_	REV__L1PA8_dup4178|chr8:94121319-94127043:-|4.057818296907117|0.2856926403965029|3.83|481.0|84|2|sense	23.04248740728303	0.5879033540491928	1				NaN	NaN	0	NaN	1546	3097	4640
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4646	18.582	NaN	3970.2	30	0	1965.5	0.106			+	24679	LGWTEPVPF	9	45	523.2710330575909	NaN	0	523.2718505859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LGWTEPVPF_	REV__ENST00000477196.5_1_1:1018275-1025826:-|nuORF;REV__nc|nan|Q96HA4-5|C1orf159;REV__nc|nan|Q96HA4|C1orf159	52.29916861842294	0.1908481487866478	1				NaN	NaN	0	NaN	1547	3097	4640
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4647	18.584	NaN	7144.2	30	0	1754.8	0.038				-1	PSDMPAGYHCP	11	26	624.2444022161455	1246.474251499091	2	624.2451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C),Oxidation (M)	_PSDM(Oxidation (M))PAGYHC(Carbamidomethyl (C))P_	DMRTC2|p.N317Tfs*50|1|0.42|ENSG00000142025|chr19:41850652-41850652|C/-|frameshift_variant;ENSG00000142025|ENST00000269945|DMRTC2;nc|ENSG00000142025|Q8IXT2-2|DMRTC2	6.31265097734313	0.8409304252590333	1				NaN	NaN	0	NaN	1548	3097	4640
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4653	18.599	NaN	3275.8	30	0	687.26	0.145			+	-1	CCVPVCCSQQC	11	32	672.2375517688373	1342.4605506044745	2	672.23681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	3 Carbamidomethyl (C)	_C(Carbamidomethyl (C))C(Carbamidomethyl (C))VPVCCSQQC(Carbamidomethyl (C))_	REV__CON__P60413;REV__ENSG00000189169|ENST00000400365|KRTAP10-12;REV__ENSG00000241123|ENST00000400372|KRTAP10-5	9.705651100619752	0.8250432705525658	1				NaN	NaN	0	NaN	1551	3100	4652
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4664	18.626	NaN	11835	30	0	2424.4	0.214	+			4994	ATSAFQTQK	9	65	491.2534791434903	980.4924053537807	2	491.2535400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSAFQTQK_	ENSG00000139687|ENST00000267163|RB1;RB1|p.V654Cfs*4|1|0.33|ENSG00000139687|chr13:48456343-48456343|A/-|frameshift_variant	195.04605151776784	5.427472092243166E-05	1				NaN	NaN	0	NaN	1559	3103	4663
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4665	18.63	NaN	2753.4	30	0	1714.9	0.106	+			13478	GLLHEVVSL	9	35	322.85866673598025	965.5541708081407	3	322.8587341308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GLLHEVVSL_	ENSG00000213047|ENST00000620048|DENND1B	26.79610172149135	0.5528238334041078	1				NaN	NaN	0	NaN	1560	3103	4663
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4666	18.632	NaN	2007.1	30	0	336.5	0.106	+			22643	KTVTFARKL	9	53	532.3351440429688	NaN	0	532.3351440429688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KTVTFARKL_	ENSG00000172139|ENST00000305815|SLC9C1;nc|ENSG00000172139|Q4G0N8-2|SLC9C1;SLC9C1|p.F702Lfs*6|1|0.31|ENSG00000172139|chr3:112204284-112204284|A/-|frameshift_variant;SLC9C1|p.S672Hfs*9|3|0.24|ENSG00000172139|chr3:112204376-112204376|A/-|frameshift_variant;SLC9C1|p.T1117Hfs*4|1|0.38|ENSG00000172139|chr3:112167236-112167236|T/-|frameshift_variant	33.921630207806714	0.3063038642147651	1				NaN	NaN	0	NaN	1561	3103	4663
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4667	18.634	NaN	1009.3	30	0	130.41	0.106			+	10383	EVATVSSPIN	10	37	508.7676086425781	NaN	0	508.7676086425781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EVATVSSPIN_	REV__ACTR3B-JMJD1C|1|fusion;REV__ENSG00000171988|ENST00000399262|JMJD1C;REV__ENST00000489372.4_1_10:64977079-65024512:-|nuORF;REV__JMJD1C|p.A1206Efs*30|1|0.07|ENSG00000171988|chr10:63208052-63208053|-/GTAAAGTT|frameshift_variant;REV__JMJD1C|p.A2114Cfs*5|1|0.04|ENSG00000171988|chr10:63189399-63189400|-/T|frameshift_variant;REV__JMJD1C|p.I2113Kfs*18|1|0.04|ENSG00000171988|chr10:63189400-63189401|-/TT|frameshift_variant;REV__JMJD1C|p.N429Ifs*32|1|0.1|ENSG00000171988|chr10:63214881-63214881|T/-|frameshift_variant	31.529811441608018	0.39664753963064203	1				NaN	NaN	0	NaN	1562	3103	4663
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4668	18.635	NaN	1422.2	30	0	200.79	0.106				-1	GVCNRSFSR	9	51	541.7612913898437	NaN	0	541.761474609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_GVC(Carbamidomethyl (C))NRSFSR_	ENSG00000102554|ENST00000377687|KLF5;nc|ENSG00000102554|Q13887-2|KLF5;nc|ENSG00000102554|Q13887-4|KLF5	36.446750945000026	0.29355505452396785	1				NaN	NaN	0	NaN	1563	3103	4663
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4669	18.637	NaN	1816.8	30	0	407.62	0.106				-1	QEGARECSSA	10	50	547.7278119594678	1093.4410709857355	2	548.227783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_QEGAREC(Carbamidomethyl (C))SSA_	ENST00000479094.5_1_9:96212872-96213460:-|nuORF;ENST00000520403.1_1_9:96209918-96213460:-|nuORF	22.579656572578934	0.6954366826851017	1				NaN	NaN	0	NaN	1564	3103	4663
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4670	18.639	NaN	1462.1	30	0	450.96	0.036	+			28972	NSGIGKASCHV	11	32	536.7614350620034	1071.5083171908068	2	536.7607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NSGIGKASCHV_	nc|ENSG00000186153|Q9NZC7-7|WWOX	21.68575002086885	0.7623253651248338	1				NaN	NaN	0	NaN	1565	3103	4663
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4678	18.659	NaN	2309.4	30	0	281.86	0.214			+	26264	LSTALRAPSGS	11	50	530.2937400210632	1058.5729271089263	2	530.2938232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSTALRAPSGS_	REV__ENST00000568731.1_1_16:50334743-50335713:+|nuORF	58.22992032128504	0.3392555181951113	1				NaN	NaN	0	NaN	1570	3106	4677
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4679	18.662	NaN	1083.8	30	0	220	0.106				-1	ASPFPLCY	8	36	477.7228379795095	NaN	0	477.7227783203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_ASPFPLC(Carbamidomethyl (C))Y_	ENST00000510904.5_1_1:249138801-249141389:+|nuORF	31.57888975003103	1.7418937515398478	1				NaN	NaN	0	NaN	1571	3106	4677
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4680	18.664	NaN	1063.4	30	0	236.48	0.106				-1	 	0	31	325.21708410937026	648.4196152855405	2	325.21734619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	1572	3106	4677
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4681	18.666	NaN	2947.4	30	0	453.53	0.106			+	19250	KADLNSNL	8	61	437.73499017097384	873.4554274087477	2	437.7351379394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KADLNSNL_	REV__ENSG00000167880|ENST00000301607|EVPL;REV__ENST00000587569.5_1_17:74014525-74023279:-|nuORF	71.87747018426188	0.391254423828572	1				NaN	NaN	0	NaN	1573	3106	4677
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4682	18.668	NaN	5256.7	30	0	3960.1	0.106	+			16078	HCPEGTFQHR	10	35	404.5179395167648	1210.5319891504944	3	404.51837158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HCPEGTFQHR_	nc|ENSG00000197558|A2VEC9|SSPOP	22.579656572578934	0.6954366826851017	1				NaN	NaN	0	NaN	1574	3106	4677
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4683	18.67	NaN	2599.9	30	0	403.75	0.106	+			4870	ATQAVFQKR	9	61	524.798409535688	1047.582266138176	2	524.798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATQAVFQKR_	ENSG00000100949|ENST00000216840|RABGGTA;ENST00000558534.5_1_14:24738716-24740321:-|nuORF;ENST00000560998.5_1_14:24737570-24740321:-|nuORF;RABGGTA|p.P160Lfs*5|1|0.17|ENSG00000100949|chr14:24269643-24269643|G/-|frameshift_variant;RABGGTA|p.Q194Sfs*43|1|0.31|ENSG00000100949|chr14:24269542-24269542|G/-|frameshift_variant	58.2462437865262	0.22823408064396822	1				NaN	NaN	0	NaN	1575	3106	4677
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4684	18.672	NaN	746.51	30	0	98.103	0.035			+	4158	ATFALDPKK	9	35	495.7824401855469	NaN	0	495.7824401855469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATFALDPKK_	REV__ENST00000429630.1_1_7:143077188-143077587:-|nuORF	29.170058357718403	0.3302935627494407	1				NaN	NaN	0	NaN	1576	3106	4677
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4692	18.69	NaN	4929.3	30	0	664.73	0.214	+			21228	KLHVNYLT	8	64	329.85978613644306	NaN	0	329.85992431640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KLHVNYLT_	ENSG00000150347|ENST00000279873|ARID5B;nc|ENSG00000150347|Q14865-2|ARID5B	44.116797842482775	1.7418937515398478	1				NaN	NaN	0	NaN	1581	3109	4691
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4693	18.693	NaN	1418	30	0	130.4	0.106	+			43358	TGDPNSKAL	9	46	451.73246042049675	901.4503679077935	2	451.73193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TGDPNSKAL_	ENSG00000172828|ENST00000303334|CES3;nc|ENSG00000172828|Q6UWW8-2|CES3	47.95952297671804	0.32689736945648856	1				NaN	NaN	0	NaN	1582	3109	4691
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4694	18.695	NaN	2112.7	30	0	474.99	0.106			+	-1	SAPELLQPPC	10	31	556.2757568359375	NaN	0	556.2757568359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SAPELLQPPC(Carbamidomethyl (C))_	REV__ARHGEF15|p.T13Rfs*169|2|0.36|ENSG00000198844|chr17:8312070-8312070|C/-|frameshift_variant	19.1035232394073	0.4201028297492154	1				NaN	NaN	0	NaN	1583	3109	4691
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4695	18.697	NaN	1618.5	30	0	197.16	0.106			+	11641	FQGSGLEEGI	10	50	518.7509490556279	1035.4873451780556	2	518.7508544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FQGSGLEEGI_	REV__DAPK2|p.P226Lfs*17|1|0.2|ENSG00000035664|chr15:63926076-63926076|G/-|frameshift_variant;REV__ENSG00000035664|ENST00000457488|DAPK2;REV__ENST00000558482.5_1_15:64221904-64332460:-|nuORF;REV__nc|ENSG00000035664|Q9UIK4-2|DAPK2	47.657333605630114	0.47858658696240314	1				NaN	NaN	0	NaN	1584	3109	4691
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4696	18.699	NaN	1127.8	30	0	346.09	0.106	+			47058	VLGKVVGL	8	38	392.7693967133796	NaN	0	392.7690124511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VLGKVVGL_	ENST00000572067.1_1_16:67916382-67916877:+|nuORF	4.6817480819748125	1.7418937515398478	1				NaN	NaN	0	NaN	1585	3109	4691
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4697	18.701	NaN	1160.4	30	0	401.96	0.035	+			33368	RHRGRSPE	8	37	497.77006683496046	NaN	0	497.7690124511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RHRGRSPE_	ENSG00000139767|ENST00000267260|SRRM4;SRRM4|p.N409Kfs*17|1|0.25|ENSG00000139767|chr12:119151159-119151160|-/C|frameshift_variant	12.959181472943097	1.7418937515398478	1				NaN	NaN	0	NaN	1586	3109	4691
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4708	18.727	NaN	8058.6	30	0	1074	0.214	+			51311	YSHSSSSL	8	57	434.19574055697313	866.3769281807463	2	434.1955261230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YSHSSSSL_	ENSG00000139641|ENST00000394048|ESYT1;ENST00000548142.1_1_12:56532791-56536718:+|nuORF;nc|ENSG00000139641|Q9BSJ8-2|ESYT1	85.35947970620816	0.2915182781752196	1				NaN	NaN	0	NaN	1594	3112	4707
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4709	18.73	NaN	4833.5	30	0	451.87	0.106	+			31023	QETLKHSGI	9	58	506.77475158377115	1011.5349502343423	2	506.77423095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QETLKHSGI_	ENSG00000163166|ENST00000295321|IWS1;IWS1|p.S802Afs*7|2|0.29|ENSG00000163166|chr2:127481100-127481100|T/-|frameshift_variant;nc|ENSG00000163166|Q96ST2-2|IWS1;nc|ENSG00000163166|Q96ST2-3|IWS1	84.9155231211612	0.07920012719736333	1				NaN	NaN	0	NaN	1595	3112	4707
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4710	18.732	NaN	2047.5	30	0	524.47	0.106			+	12206	GARAGPSL	8	37	364.7060859540937	727.3976189749874	2	364.7058410644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GARAGPSL_	REV__ENSG00000105429|ENST00000251268|MEGF8;REV__MEGF8|p.D1331Tfs*8|1|0.35|ENSG00000105429|chr19:42353999-42353999|C/-|frameshift_variant;REV__MEGF8|p.G1586Dfs*144|1|0.39|ENSG00000105429|chr19:42356903-42356903|G/-|frameshift_variant;REV__MEGF8|p.G166Vfs*53|2|0.33|ENSG00000105429|chr19:42334146-42334146|G/-|frameshift_variant;REV__MEGF8|p.G1861Efs*10|1|0.13|ENSG00000105429|chr19:42360864-42360864|G/-|frameshift_variant;REV__MEGF8|p.G2143Afs*20|2|0.22|ENSG00000105429|chr19:42368603-42368603|G/-|frameshift_variant;REV__MEGF8|p.P499Rfs*19|1|0.53|ENSG00000105429|chr19:42337186-42337186|C/-|frameshift_variant;REV__MEGF8|p.R1953Pfs*3|1|0.19|ENSG00000105429|chr19:42362390-42362391|-/C|frameshift_variant;REV__MEGF8|p.T1670Qfs*60|3|0.4|ENSG00000105429|chr19:42357575-42357575|C/-|frameshift_variant;REV__MEGF8|p.Y532Tfs*9|1|0.26|ENSG00000105429|chr19:42343551-42343551|G/-|frameshift_variant;REV__nc|ENSG00000105429|Q7Z7M0-2|MEGF8	42.47446043378293	0.6409579893742323	1				NaN	NaN	0	NaN	1596	3112	4707
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4711	18.734	NaN	1275.6	30	0	121.87	0.106	+			7136	DAAYSHHY	8	47	482.20116952269143	962.3877861121829	2	482.2010498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DAAYSHHY_	ENSG00000059378|ENST00000263549|PARP12	60.29395666154354	0.49887135096048313	1				NaN	NaN	0	NaN	1597	3112	4707
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4712	18.736	NaN	2202.1	30	0	282.22	0.106	+			12381	GDVNLLAINEF	11	46	602.816231814987	NaN	0	602.8165283203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GDVNLLAINEF_	tr|U7SQV9|U7SQV9_FUSNUChromosomepartitionproteinSmcOS=FusobacteriumnucleatumCTI-5OX=1316586GN=smcPE=3SV=1	36.527901853580055	0.402626628657532	1				NaN	NaN	0	NaN	1598	3112	4707
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4713	18.738	NaN	2825.1	30	0	571.3	0.106			+	31884	QQAEKALR	8	53	472.26921917817015	942.5238854231403	2	472.2696228027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QQAEKALR_	REV__ENSG00000175137|ENST00000366472|SH3BP5L;REV__nc|ENSG00000175137|Q7L8J4-2|SH3BP5L	42.47446043378293	0.6409579893742323	1				NaN	NaN	0	NaN	1599	3112	4707
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4714	18.739	NaN	9714.8	30	0	892.35	0.035			+	20126	KEKLRGLGL	9	68	507.32685364841825	1012.6391543636365	2	507.3268737792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KEKLRGLGL_	REV__ENSG00000126464|ENST00000418929|PRR12;REV__nc|ENSG00000126464|Q9ULL5-2|PRR12;REV__PRR12|p.P506Lfs*44|1|0.33|ENSG00000126464|chr19:49599569-49599569|C/-|frameshift_variant;REV__PRR12|p.R352Gfs*50|1|0.13|ENSG00000126464|chr19:49597847-49597847|G/-|frameshift_variant	49.44154591367651	0.3095138337212152	1				NaN	NaN	0	NaN	1600	3112	4707
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4722	18.759	NaN	7819.7	30	0	2388.3	0.214			+	9165	EGPELRLAQ	9	43	338.18557454748475	NaN	0	338.185546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EGPELRLAQ_	REV__CROCC|p.Q588Pfs*15|1|0.33|ENSG00000058453|chr1:16940044-16940045|-/CC|frameshift_variant;REV__ENSG00000058453|ENST00000375541|CROCC	23.04248740728303	0.3589936788096251	1				NaN	NaN	0	NaN	1605	3115	4721
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4723	18.763	NaN	3944.5	30	0	604.96	0.106			+	19782	KEAKKPQKK	9	57	542.8455185933083	1083.6764842534164	2	542.8460693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEAKKPQKK_	REV__AFF4|p.R689Gfs*28|1|0.29|ENSG00000072364|chr5:132896566-132896566|A/-|frameshift_variant;REV__ENSG00000072364|ENST00000265343|AFF4;REV__nc|ENSG00000072364|Q9UHB7-2|AFF4	78.26377905018397	0.10505600812668463	1				NaN	NaN	0	NaN	1606	3115	4721
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4724	18.765	NaN	3333.7	30	0	376.03	0.106	+			39676	STIGPEGVHQK	11	60	576.8036908309446	1151.592828728689	2	576.8042602539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STIGPEGVHQK_	nc|ENSG00000157654|Q9Y2D5-8|PALM2AKAP2;nc|ENSG00000157654|Q9Y2D5-9|PALM2AKAP2	77.28774426308219	0.17498409934748582	1				NaN	NaN	0	NaN	1607	3115	4721
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4725	18.767	NaN	1849	30	0	323.43	0.106				-1	CVERRGGEGP	10	46	558.764032041002	1115.513511148804	2	558.7647094726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_C(Carbamidomethyl (C))VERRGGEGP_	ENST00000587856.1_1_17:43318935-43319418:+|nuORF	25.57405402267927	0.6709832231498071	1				NaN	NaN	0	NaN	1608	3115	4721
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4726	18.768	NaN	703.42	30	0	155.39	0.106	+			17956	IGRSLSGFGT	10	28	332.1818542480469	NaN	0	332.1818542480469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IGRSLSGFGT_	tr|U7SQT5|U7SQT5_FUSNUCytidylatekinaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01682PE=4SV=1	19.996771675451527	0.4201028297492154	1				NaN	NaN	0	NaN	1609	3115	4721
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4727	18.77	NaN	4271	30	0	495.42	0.106			+	9153	EGNGQLFILG	10	70	524.276966207285	1046.53937948137	2	524.276611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EGNGQLFILG_	REV__ENST00000583478.1_1_17:61514659-61514908:-|nuORF	42.396135135203025	0.5270658956260207	1				NaN	NaN	0	NaN	1610	3115	4721
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4728	18.772	NaN	1584.4	30	0	243.12	0.035	+			39709	STIPPHVQK	9	51	503.78730022157646	NaN	0	503.78753662109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STIPPHVQK_	ENSG00000163513|ENST00000295754|TGFBR2;nc|ENSG00000163513|P37173-2|TGFBR2;nc|ENSG00000163513|P37173-3|TGFBR2;TGFBR2|p.H523Rfs*19|1|0.27|ENSG00000163513|chr3:30691458-30691459|-/GACC|frameshift_variant	37.15910966729921	0.2899585034171616	1				NaN	NaN	0	NaN	1611	3115	4721
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4738	18.794	NaN	3108.7	30	0	399.19	0.212	+			4748	ATMQGDREQLK	11	71	638.8193428794727	1275.6241328257454	2	638.8191528320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATMQGDREQLK_	ADNP|p.Y1033Mfs*48|1|0.33|ENSG00000101126|chr20:50891618-50891618|G/-|frameshift_variant;ENSG00000101126|ENST00000621696|ADNP	67.74936324283564	0.2545025576448278	1				NaN	NaN	0	NaN	1618	3118	4737
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4739	18.797	NaN	8817.1	30	0	3971.3	0.106			+	1660	AGPVGFAK	8	46	373.7133387916418	745.4121246500836	2	373.7129821777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AGPVGFAK_	REV__ENSG00000244617|ENST00000320256|ASPRV1;REV__nc|ENSG00000244617|Q53RT3|ASPRV1	65.89745868150666	0.44339748671293633	1				NaN	NaN	0	NaN	1619	3118	4737
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4740	18.799	NaN	2528.7	30	0	1580.9	0.106	+			42574	TASQLRYF	8	34	493.258708023703	984.502863114206	2	493.2584533691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TASQLRYF_	L1MC5_dup2219|chr2:240616384-240616624:-|1.426517432550395|0.100608666825259|3.83|456.0|8|1|anti-sense	24.20275056022122	0.7724576178584145	1				NaN	NaN	0	NaN	1620	3118	4737
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4741	18.801	NaN	2476.5	30	0	260.73	0.106			+	17451	ICCLRQNMI	9	58	547.2707130045459	NaN	0	547.2688598632812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ICCLRQNMI_	REV__ENSG00000182974|ENST00000332663|OR4M2B;REV__ENSG00000274102|ENST00000614722|OR4M2	38.80614096846853	0.28164298475537564	1				NaN	NaN	0	NaN	1621	3118	4737
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4742	18.803	NaN	1387.4	30	0	229.61	0.032			+	15507	GVAVVRVK	8	39	414.27660674429654	826.5386605553931	2	414.276611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GVAVVRVK_	REV__ENSG00000070985|ENST00000696290|TRPM5;REV__nc|ENSG00000070985|Q9NZQ8-2|TRPM5;REV__nc|ENSG00000070985|Q9NZQ8-3|TRPM5	14.664097394203935	0.7913966407026132	1				NaN	NaN	0	NaN	1622	3118	4737
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4756	18.832	NaN	45237	30	0	10870	0.214	+			41013	SVGSVITKK	9	81	459.7844018281066	917.5542507230132	2	459.7842712402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVGSVITKK_	ENSG00000076554|ENST00000518937|TPD52;ENST00000517445.5_1_8:80962678-80964851:-|nuORF;ENST00000521354.5_1_8:80950353-81083761:-|nuORF;ENST00000522364.5_1_8:80963727-80992703:-|nuORF;nc|ENSG00000076554|P55327-2|TPD52;nc|ENSG00000076554|P55327-3|TPD52;nc|ENSG00000076554|P55327-5|TPD52;nc|ENSG00000076554|P55327-6|TPD52;nc|ENSG00000076554|P55327-7|TPD52;nc|ENSG00000076554|P55327|TPD52	168.25843898104137	0.0030641937004078144	1				NaN	NaN	0	NaN	1633	3121	4755
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4757	18.836	NaN	5167.2	30	0	2916.4	0.106	+			9190	EGQLQQVVF	9	36	349.85367103272034	1046.539183698361	3	349.85369873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EGQLQQVVF_	WDR81|p.P1456Q|1|0.4|ENSG00000167716|chr17:1732709-1732709|C/A|missense_variant	18.324413293986947	0.6112419832031293	1				NaN	NaN	0	NaN	1634	3121	4755
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4758	18.838	NaN	5617.4	30	0	928.64	0.106	+			40776	SVDPKNYPK	9	61	524.276966207285	1046.53937948137	2	524.277099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVDPKNYPK_	ENSG00000125538|ENST00000263341|IL1B;ENST00000491056.5_1_2:113587940-113590763:-|nuORF	74.25504064058377	0.12238981753128622	1				NaN	NaN	0	NaN	1635	3121	4755
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4759	18.839	NaN	4769.3	30	0	2328.6	0.106	+			36960	SILTRKKPA	9	42	338.5535781092228	1012.6389049278685	3	338.5536804199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SILTRKKPA_	ENSG00000185038|ENST00000389758|MROH2A	17.364965105453717	0.6112419832031293	1				NaN	NaN	0	NaN	1636	3121	4755
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4760	18.841	NaN	3077.4	30	0	651.54	0.106				-1	CADNTGAKNL	10	60	532.2459401179957	1062.4773273027913	2	532.2457275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_C(Carbamidomethyl (C))ADNTGAKNL_	ENSG00000125691|ENST00000479035|RPL23;ENST00000584912.5_1_17:37008851-37009963:-|nuORF	51.19269402634007	0.44601001148513897	1				NaN	NaN	0	NaN	1637	3121	4755
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4761	18.843	NaN	3199.8	30	0	386.46	0.037	+			4736	ATMPDNTAAQK	11	45	574.2736656528919	1146.5327783725836	2	574.274658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATMPDNTAAQK_	ENSG00000105357|ENST00000642316|MYH14;MYH14|p.G549Wfs*8|1|0.23|ENSG00000105357|chr19:50250519-50250520|-/C|frameshift_variant;MYH14|p.L1950Sfs*14|1|0.34|ENSG00000105357|chr19:50309646-50309646|C/-|frameshift_variant;MYH14|p.M997*|1|0.19|ENSG00000105357|chr19:50271483-50271483|A/-|frameshift_variant;MYH14|p.P548Lfs*25|2|0.32|ENSG00000105357|chr19:50250520-50250520|C/-|frameshift_variant;MYH14|p.R929Gfs*44|1|0.38|ENSG00000105357|chr19:50268237-50268237|G/-|frameshift_variant;nc|ENSG00000105357|Q7Z406-4|MYH14;nc|ENSG00000105357|Q7Z406-5|MYH14;nc|ENSG00000105357|Q7Z406-6|MYH14;nc|ENSG00000105357|Q7Z406|MYH14	50.48352884301831	0.4144963662491505	1				NaN	NaN	0	NaN	1638	3121	4755
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4762	18.844	NaN	1500.4	30	0	363.41	0.14			+	16655	HIEVFKGF	8	32	488.76835763062536	975.5221623280507	2	488.76910400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HIEVFKGF_	REV__ENSG00000196586|ENST00000369977|MYO6;REV__nc|ENSG00000196586|Q9UM54-2|MYO6;REV__nc|ENSG00000196586|Q9UM54-4|MYO6;REV__nc|ENSG00000196586|Q9UM54-5|MYO6;REV__nc|ENSG00000196586|Q9UM54-6|MYO6;REV__nc|ENSG00000196586|Q9UM54|MYO6	18.324413293986947	0.7971860551947066	1				NaN	NaN	0	NaN	1639	3121	4755
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4775	18.873	NaN	15099	30	0	3674.5	0.214	+			3332	ASMKKVKSL	9	64	336.5340967109813	1006.580460733144	3	336.5342712402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ASM(Oxidation (M))KKVKSL_	ENST00000369426.9_1_1:119575536-119588262:-|nuORF	45.97224482568171	0.3502073465782774	1				NaN	NaN	0	NaN	1649	3124	4774
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4776	18.877	NaN	3641.3	30	0	651.21	0.106	+			35554	SAVSTRVYK	9	55	505.7854702766218	1009.5563876200437	2	505.7850646972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAVSTRVYK_	ENST00000589805.1_1_17:42275437-42276541:-|nuORF;ENST00000590169.5_1_17:42275437-42275799:-|nuORF	78.26377905018397	0.10505600812668463	1				NaN	NaN	0	NaN	1650	3124	4774
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4777	18.879	NaN	3171	30	0	708.86	0.106				-1	 	0	49	486.75875731488566	971.5029616965713	2	486.7588195800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	1651	3124	4774
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4778	18.881	NaN	2449.1	30	0	547.65	0.106				-1	ICIAEHCTN	9	51	530.7305995320511	1059.446646130902	2	530.730224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_IC(Carbamidomethyl (C))IAEHCTN_	nc|ENSG00000164616|Q9UKT6|FBXL21P	26.69291269510374	0.5537881896960711	1				NaN	NaN	0	NaN	1652	3124	4774
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4779	18.882	NaN	1748.8	30	0	594.38	0.106			+	11993	FVSRPLSH	8	29	471.7632141113281	NaN	0	471.7632141113281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FVSRPLSH_	REV__ENSG00000164151|ENST00000296564|ICE1;REV__ICE1|p.D1105Rfs*4|1|0.21|ENSG00000164151|chr5:5462639-5462640|-/G|frameshift_variant;REV__ICE1|p.G1104Efs*6|1|0.34|ENSG00000164151|chr5:5462640-5462640|G/-|frameshift_variant;REV__ICE1|p.H1965Afs*55|1|0.29|ENSG00000164151|chr5:5465219-5465220|-/A|frameshift_variant	15.641811463095205	1.7418937515398478	1				NaN	NaN	0	NaN	1653	3124	4774
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4780	18.884	NaN	3836.7	30	0	628.56	0.106	+			33520	RKSADPKR	8	63	479.2829559980618	956.5513590629237	2	479.2829895019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RKSADPKR_	ENSG00000181135|ENST00000358656|ZNF707;ENST00000527561.5_1_8:144766681-144776697:+|nuORF;ENST00000532486.5_1_8:144774355-144776697:+|nuORF	56.72105179125745	0.5342425954139568	1				NaN	NaN	0	NaN	1654	3124	4774
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4781	18.886	NaN	8962	30	0	1511	0.04				-1	CWFSQRAGWTV	11	73	699.3238340879572	1396.6331152427142	2	699.3229370117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_C(Carbamidomethyl (C))WFSQRAGWTV_	ENSG00000204687|ENST00000377127|MAS1L	28.081489160057373	0.6952392775027776	1				NaN	NaN	0	NaN	1655	3124	4774
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4793	18.912	NaN	6096.4	30	0	854.62	0.215			+	33842	RREHPIVV	8	56	503.30108383879553	1004.5876147443911	2	503.3012390136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RREHPIVV_	REV__ENPP2|p.F471Sfs*19|1|0.34|ENSG00000136960|chr8:119584005-119584005|A/-|frameshift_variant;REV__ENSG00000136960|ENST00000075322|ENPP2;REV__nc|ENSG00000136960|Q13822-2|ENPP2;REV__nc|ENSG00000136960|Q13822-3|ENPP2	42.396135135203025	0.6414440140393314	1				NaN	NaN	0	NaN	1664	3127	4792
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4794	18.916	NaN	2133.4	30	0	421.6	0.106	+			13539	GLSFGKKEK	9	52	497.2893180014901	992.5640830697802	2	497.2894287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GLSFGKKEK_	ENSG00000151498|ENST00000281182|ACAD8;ENST00000524426.5_1_11:134126456-134131533:+|nuORF;ENST00000524739.1_1_11:134129171-134129964:+|nuORF;ENST00000526026.5_1_11:134126984-134132770:+|nuORF;ENST00000527082.5_1_11:134129171-134129738:+|nuORF;ENST00000528325.5_1_11:134126509-134129738:+|nuORF;ENST00000530533.5_1_11:134126456-134129738:+|nuORF;ENST00000531338.5_1_11:134126482-134132106:+|nuORF;ENST00000533387.5_1_11:134123508-134129738:+|nuORF;nc|ENSG00000151498|Q9UKU7-2|ACAD8;nc|ENSG00000151498|Q9UKU7-3|ACAD8	47.95952297671804	0.32689736945648856	1				NaN	NaN	0	NaN	1665	3127	4792
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4795	18.918	NaN	2311	30	0	469.91	0.106	+			12454	GEDGSGKTTL	10	54	482.73246232885054	963.4503717245011	2	482.73223876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEDGSGKTTL_	ENSG00000135720|ENST00000258198|DYNC1LI2;nc|ENSG00000135720|O43237-2|DYNC1LI2	81.52500206392136	0.18316182710238588	1				NaN	NaN	0	NaN	1666	3127	4792
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4796	18.919	NaN	1305.5	30	0	324.35	0.106			+	-1	PWQRPCDL	8	40	536.2561937375277	NaN	0	536.2568969726562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_PWQRPC(Carbamidomethyl (C))DL_	REV__ENSG00000086200|ENST00000325324|IPO11;REV__IPO11|p.F304Lfs*18|1|0.23|ENSG00000086200|chr5:62483180-62483180|T/-|frameshift_variant;REV__IPO11|p.S807Ffs*4|1|0.22|ENSG00000086200|chr5:62551288-62551289|TT/-|frameshift_variant;REV__IPO11|p.S807Ffs*5|1|0.37|ENSG00000086200|chr5:62551287-62551288|-/T|frameshift_variant;REV__IPO11|p.S807Lfs*22|2|0.29|ENSG00000086200|chr5:62551288-62551288|T/-|frameshift_variant;REV__nc|ENSG00000086200|Q9UI26-2|IPO11	31.954861631926434	1.7418937515398478	1				NaN	NaN	0	NaN	1667	3127	4792
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4797	18.921	NaN	1145.3	30	0	757.89	0.106	+			37709	SLSSLAFH	8	21	431.226461014705	860.4383690962101	2	431.2259521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SLSSLAFH_	nc|ENSG00000112339|Q9Y450-2|HBS1L	8.822329726475273	0.7821568878176242	1				NaN	NaN	0	NaN	1668	3127	4792
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4798	18.923	NaN	2205.8	30	0	330.08	0.039			+	8832	EELQNRRHPL	10	37	646.3465650236229	NaN	0	646.3469848632812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EELQNRRHPL_	REV__ENST00000491796.5_1_7:76950676-76950709:-|nuORF	21.68575002086885	0.4201028297492154	1				NaN	NaN	0	NaN	1669	3127	4792
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4808	18.945	NaN	3356.9	30	0	470.27	0.214	+			15697	GVNDAPALKK	10	63	506.7924020981076	1011.5702512630152	2	506.79290771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVNDAPALKK_	ATP2A2|p.I1027Cfs*4|1|0.37|ENSG00000174437|chr12:110346394-110346395|-/TGTGCTGCTCATAATGCCCCTGG|frameshift_variant;ENSG00000074370|ENST00000397041|ATP2A3;ENSG00000174437|ENST00000539276|ATP2A2;ENSG00000196296|ENST00000395503|ATP2A1;nc|ENSG00000074370|Q93084-1|ATP2A3;nc|ENSG00000074370|Q93084-3|ATP2A3;nc|ENSG00000074370|Q93084-4|ATP2A3;nc|ENSG00000074370|Q93084-5|ATP2A3;nc|ENSG00000074370|Q93084-6|ATP2A3;nc|ENSG00000074370|Q93084-7|ATP2A3;nc|ENSG00000174437|P16615-2|ATP2A2;nc|ENSG00000174437|P16615-3|ATP2A2;nc|ENSG00000174437|P16615-4|ATP2A2;nc|ENSG00000174437|P16615-5|ATP2A2;nc|ENSG00000196296|O14983-3|ATP2A1;nc|ENSG00000196296|O14983|ATP2A1;tr|U7STP1|U7STP1_FUSNUP-typeCa(2+)transporterOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01417PE=4SV=1	88.17693792209575	0.14151128060301246	1				NaN	NaN	0	NaN	1676	3130	4807
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4809	18.948	NaN	1035.3	30	0	121.67	0.106			+	21205	KLEQIAPK	8	47	463.78711245099566	925.5596719687913	2	464.2889709472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KLEQIAPK_	REV__ENSG00000175110|ENST00000680020|MRPS22;REV__ENST00000486705.1_1_3:139062973-139067190:+|nuORF;REV__nc|ENSG00000175110|P82650-2|MRPS22	29.14955571784316	0.7342621283720113	1				NaN	NaN	0	NaN	1677	3130	4807
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4810	18.95	NaN	1832.5	30	0	286.69	0.106			+	598	ADMMKEVWEET	11	40	684.792724609375	NaN	0	684.792724609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ADMMKEVWEET_	REV__ENSG00000154760|ENST00000285013|SLFN13;REV__nc|ENSG00000154760|Q68D06-2|SLFN13	26.063383197487333	0.44926255568796863	1				NaN	NaN	0	NaN	1678	3130	4807
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4811	18.952	NaN	1647.8	30	0	288.49	0.106				-1	KQALFALCK	9	38	539.8094286801809	NaN	0	539.8108520507812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_KQALFALC(Carbamidomethyl (C))K_	ATM|p.C1838Vfs*8|1|0.42|ENSG00000149311|chr11:108304687-108304687|T/-|frameshift_variant;ATM|p.G1642Wfs*23|1|0.78|ENSG00000149311|chr11:108297299-108297300|-/T|frameshift_variant;ATM|p.G2425Vfs*15|1|0.33|ENSG00000149311|chr11:108329204-108329204|G/-|frameshift_variant;ATM|p.I1581Sfs*20|1|0.25|ENSG00000149311|chr11:108293437-108293437|A/-|frameshift_variant;ATM|p.K2303Rfs*7|2|0.24|ENSG00000149311|chr11:108326153-108326153|A/-|frameshift_variant;ATM|p.K2413Tfs*11|1|0.06|ENSG00000149311|chr11:108329168-108329169|-/CAACCAATTTAAATTAT|frameshift_variant;ATM|p.K2811Sfs*46|1|0.34|ENSG00000149311|chr11:108345750-108345750|A/-|frameshift_variant;ATM|p.L2231Wfs*4|1|0.52|ENSG00000149311|chr11:108325426-108325426|T/-|frameshift_variant;ATM|p.P1587Ffs*13|1|0.08|ENSG00000149311|chr11:108293459-108293462|ACCC/-|frameshift_variant;ATM|p.R1973Efs*17|1|0.26|ENSG00000149311|chr11:108310311-108310311|A/-|frameshift_variant;ATM|p.T1609*|1|0.23|ENSG00000149311|chr11:108294972-108294973|-/TG|frameshift_variant;ATM|p.V1446Cfs*2|1|0.25|ENSG00000149311|chr11:108289697-108289698|-/T|frameshift_variant;ENSG00000149311|ENST00000675843|ATM	30.503639358989545	0.3235605894931338	1				NaN	NaN	0	NaN	1679	3130	4807
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4812	18.954	NaN	869.99	30	0	119.47	0.034			+	25711	LRNVAFDI	8	32	474.267822265625	NaN	0	474.267822265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LRNVAFDI_	REV__ENSG00000080839|ENST00000373664|RBL1;REV__nc|ENSG00000080839|P28749-2|RBL1	35.200714571348534	1.7418937515398478	1				NaN	NaN	0	NaN	1680	3130	4807
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4820	18.972	NaN	3026.3	30	0	440.31	0.214			+	39775	STKKIVSAW	9	60	510.29590373521944	1018.5772545372389	2	510.2955322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STKKIVSAW_	REV__IRF2|p.R331W|1|0.23|ENSG00000168310|chr4:184388817-184388817|G/A|missense_variant	68.78682469695295	0.14603441672067394	1				NaN	NaN	0	NaN	1685	3133	4819
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4821	18.976	NaN	2281.2	30	0	567.28	0.106	+			35046	SADTHGTDAL	10	63	494.22248280219185	986.4304126711837	2	494.2223205566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SADTHGTDAL_	ENST00000531976.1_1_11:1490730-1491405:-|nuORF	47.657333605630114	0.47858658696240314	1				NaN	NaN	0	NaN	1686	3133	4819
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4822	18.978	NaN	2422.5	30	0	341.24	0.106			+	24438	LGDACQELLE	10	60	545.7587479649854	1089.5029429967708	2	545.75927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LGDACQELLE_	REV__ENSG00000088387|ENST00000682017|DOCK9;REV__nc|ENSG00000088387|Q9BZ29-3|DOCK9;REV__nc|ENSG00000088387|Q9BZ29-4|DOCK9;REV__nc|ENSG00000088387|Q9BZ29-5|DOCK9;REV__nc|ENSG00000088387|Q9BZ29|DOCK9	39.252832667884924	0.5560298534376815	1				NaN	NaN	0	NaN	1687	3133	4819
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4823	18.98	NaN	3634.8	30	0	658.01	0.106			+	17965	IGTREIRK	8	47	324.86952196850314	971.5867365057095	3	324.8698425292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IGTREIRK_	REV__ENSG00000167264|ENST00000565263|DUS2	37.15910966729921	0.6739408393984688	1				NaN	NaN	0	NaN	1688	3133	4819
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4824	18.981	NaN	2425.5	30	0	381.44	0.106	+			772	AEERRKYTL	9	43	583.3192304358332	1164.6239079384663	2	583.3203735351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEERRKYTL_	ENSG00000140259|ENST00000267812|MFAP1	30.317721548370564	0.5199124245378496	1				NaN	NaN	0	NaN	1689	3133	4819
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4825	18.983	NaN	1109.1	30	0	106.52	0.106	+			47969	VSNVDLDH	8	37	449.7164445074264	NaN	0	449.7168273925781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VSNVDLDH_	ENST00000486257.5_1_3:114027142-114027259:+|nuORF	38.80614096846853	1.7418937515398478	1				NaN	NaN	0	NaN	1690	3133	4819
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4826	18.985	NaN	1107	30	0	333.15	0.034			+	14074	GSLDKTHGP	9	39	456.23233778745845	NaN	0	456.232177734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GSLDKTHGP_	REV__ENSG00000166716|ENST00000560079|ZNF592	34.172542307311794	0.30503706118289736	1				NaN	NaN	0	NaN	1691	3133	4819
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4835	19.007	NaN	22347	30	0	5602	0.214	+			41555	SVQENIQQK	9	68	537.282789184405	1072.55102543561	2	537.2831420898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVQENIQQK_	ENSG00000138160|ENST00000260731|KIF11	172.24860141594272	0.002383092361811508	1				NaN	NaN	0	NaN	1697	3136	4834
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4836	19.01	NaN	4728.9	30	0	1081.9	0.106	+			20107	KEKKLTSDL	9	69	531.3140258789062	NaN	0	531.3140258789062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEKKLTSDL_	ENSG00000125844|ENST00000377813|RRBP1;nc|ENSG00000125844|Q9P2E9-3|RRBP1	72.87924865735499	0.09578366712754152	1				NaN	NaN	0	NaN	1698	3136	4834
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4837	19.012	NaN	1567.1	30	0	406.85	0.106	+			7381	DDTEDTVVS	9	41	490.70733699758176	979.4001210619635	2	490.706787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DDTEDTVVS_	ENSG00000188739|ENST00000408888|RBM34;ENST00000476261.5_1_1:235316002-235324541:-|nuORF;nc|ENSG00000188739|P42696-2|RBM34	38.80614096846853	0.43426287593479557	1				NaN	NaN	0	NaN	1699	3136	4834
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4838	19.014	NaN	1578.5	30	0	298.9	0.106				-1	LQPTQGCMGY	10	45	577.75346836773	1153.4923838022598	2	577.753662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_LQPTQGC(Carbamidomethyl (C))MGY_	ENSG00000146530|ENST00000275358|VWDE;VWDE|p.A290Cfs*4|1|0.41|ENSG00000146530|chr7:12379488-12379489|-/A|frameshift_variant;VWDE|p.N589*|1|0.33|ENSG00000146530|chr7:12370687-12370688|-/A|frameshift_variant	45.97224482568171	0.49411383603842696	1				NaN	NaN	0	NaN	1700	3136	4834
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4839	19.016	NaN	1294.7	30	0	297.82	0.106	+			36342	SESSPPKAM	9	40	467.2207476317322	NaN	0	467.2213439941406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SESSPPKAM_	ENSG00000050405|ENST00000341247|LIMA1;LIMA1|p.T536Lfs*38|2|0.4|ENSG00000050405|chr12:50177739-50177739|G/-|frameshift_variant;nc|ENSG00000050405|Q9UHB6-2|LIMA1;nc|ENSG00000050405|Q9UHB6-3|LIMA1;nc|ENSG00000050405|Q9UHB6-4|LIMA1;nc|ENSG00000050405|Q9UHB6-5|LIMA1	56.72105179125745	0.16330365735109603	1				NaN	NaN	0	NaN	1701	3136	4834
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4840	19.018	NaN	1287.5	30	0	150.43	0.106			+	-1	HMHRSSASPDA	11	35	606.2672546351782	1210.5199563371564	2	606.2672119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_HM(Oxidation (M))HRSSASPDA_	REV__ENSG00000130518|ENST00000392413|IQCN;REV__ENST00000599638.2_1_19:18367992-18369432:-|nuORF;REV__nc|ENSG00000130518|Q9H0B3-3|IQCN;REV__nc|ENSG00000130518|Q9H0B3-5|IQCN;REV__nc|ENSG00000130518|Q9H0B3|IQCN	29.170058357718403	0.683821074385409	1				NaN	NaN	0	NaN	1702	3136	4834
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4841	19.019	NaN	2006.5	30	0	277.99	0.037				-1	QCGKAFSCSPT	11	48	593.2563830750846	1184.4982132169691	2	593.2569580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_QC(Carbamidomethyl (C))GKAFSCSPT_	ENSG00000196646|ENST00000343979|ZNF136;ENST00000464860.1_1_19:12296590-12298813:+|nuORF	37.81151784470057	0.5878881669006212	1				NaN	NaN	0	NaN	1703	3136	4834
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4848	19.036	NaN	10251	30	0	2454.7	0.214	+			39455	STEPPYSQK	9	62	518.7509490556279	1035.4873451780556	2	518.7511596679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STEPPYSQK_	EEF1A1|p.P263Lfs*27|1|0.36|ENSG00000156508|chr6:73518595-73518595|G/-|frameshift_variant;ENSG00000156508|ENST00000309268|EEF1A1;ENST00000359165.5_1_12:19610040-19610154:-|nuORF;ENST00000401075.3_1_1:31961199-31961370:-|nuORF;ENST00000434005.1_1_7:22551057-22551540:-|nuORF;ENST00000443590.1_1_2:107314616-107314670:-|nuORF;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	85.16082228582465	0.07850854922700509	1				NaN	NaN	0	NaN	1707	3139	4847
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4849	19.039	NaN	3976.5	30	0	937.65	0.106			+	30810	QECSEQAQ	8	64	461.6818486328041	921.3491443324082	2	461.68218994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QECSEQAQ_	REV__ENSG00000180264|ENST00000696331|ADGRD2;REV__nc|ENSG00000180264|Q7Z7M1|ADGRD2	49.44154591367651	0.597725784090933	1				NaN	NaN	0	NaN	1708	3139	4847
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4850	19.041	NaN	5052.1	30	0	1361.9	0.106	+			32063	QRYVQLKQ	8	68	531.8084106445312	NaN	0	531.8084106445312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QRYVQLKQ_	ENSG00000161981|ENST00000293861|SNRNP25;ENST00000481947.1_1_16:105509-105883:+|nuORF;nc|ENSG00000161981|Q9BV90|SNRNP25	79.9392285194092	1.7418937515398478	1				NaN	NaN	0	NaN	1709	3139	4847
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4851	19.043	NaN	12031	30	0	1506	0.106	+			46925	VIYEKTIRK	9	74	575.3527241829653	1148.6908954327305	2	575.3535766601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VIYEKTIRK_	ENSG00000124429|ENST00000262753|POF1B;nc|ENSG00000124429|Q8WVV4-1|POF1B;nc|ENSG00000124429|Q8WVV4-3|POF1B	129.42129120953632	0.01549634589885217	1				NaN	NaN	0	NaN	1710	3139	4847
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4852	19.045	NaN	2277.8	30	0	700.09	0.106			+	28239	NDAATRTTI	9	43	481.74823330111496	NaN	0	481.74822998046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NDAATRTTI_	REV__ENSG00000064933|ENST00000441310|PMS1;REV__ENST00000421722.5_1_2:190656520-190720594:+|nuORF;REV__nc|ENSG00000064933|P54277-2|PMS1;REV__nc|ENSG00000064933|P54277-3|PMS1;REV__PMS1|p.K164Nfs*6|3|0.09|ENSG00000064933|chr2:189818084-189818084|A/-|frameshift_variant;REV__PMS1|p.N469Mfs*7|1|0.45|ENSG00000064933|chr2:189854675-189854675|A/-|frameshift_variant	29.170058357718403	0.3302935627494407	1				NaN	NaN	0	NaN	1711	3139	4847
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4853	19.047	NaN	1531.6	30	0	149.47	0.106	+			5685	AVEGGMKCVK	10	51	511.2622118809254	1020.5098708286508	2	511.2621154785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AVEGGMKCVK_	CD63|p.A47Lfs*37|1|0.14|ENSG00000135404|chr12:55727267-55727267|C/-|frameshift_variant;ENSG00000135404|ENST00000257857|CD63;nc|ENSG00000135404|P08962-2|CD63	37.81151784470057	0.569310847604193	1				NaN	NaN	0	NaN	1712	3139	4847
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4854	19.048	NaN	1503.4	30	0	334.63	0.035	+			12106	GADYRWSF	8	43	501.2268939523133	1000.4392349714266	2	501.227294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GADYRWSF_	ENSG00000163781|ENST00000260810|TOPBP1;TOPBP1|p.K1266Nfs*10|1|0.13|ENSG00000163781|chr3:133616887-133616887|T/-|frameshift_variant;TOPBP1|p.R1378Sfs*18|1|0.04|ENSG00000163781|chr3:133611043-133611044|-/AAAAGAGAATGTG|frameshift_variant;TOPBP1|p.R964Efs*12|1|0.19|ENSG00000163781|chr3:133624090-133624090|T/-|frameshift_variant	38.80614096846853	0.6637206697844082	1				NaN	NaN	0	NaN	1713	3139	4847
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4862	19.067	NaN	1600.9	30	0	319.83	0.214	+			35434	SASDCFARK	9	50	492.7316813597572	983.4488097863144	2	492.7315368652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SASDCFARK_	ENST00000274000.9_2_4:113153062-113153314:+|nuORF	52.936696900407355	0.27249468807391813	1				NaN	NaN	0	NaN	1718	3142	4861
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4863	19.07	NaN	2341.8	30	0	357.65	0.106				-1	 	0	42	329.7214377335432	657.4283225338864	2	329.7214660644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	1719	3142	4861
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4864	19.072	NaN	2082.5	30	0	648.2	0.106	+			36939	SILKESKYK	9	55	548.3230590820312	NaN	0	548.3230590820312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SILKESKYK_	ENSG00000074603|ENST00000300141|DPP8;nc|ENSG00000074603|Q6V1X1-2|DPP8;nc|ENSG00000074603|Q6V1X1-4|DPP8;nc|ENSG00000074603|Q6V1X1-5|DPP8;nc|ENSG00000074603|Q6V1X1|DPP8	47.95952297671804	0.22075498469600283	1				NaN	NaN	0	NaN	1720	3142	4861
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4865	19.074	NaN	1303	30	0	345.04	0.106	+			2776	ARPGAGSL	8	36	364.7060859540937	727.3976189749874	2	364.7064208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ARPGAGSL_	PNCK|p.K342Qfs*?|1|0.53|ENSG00000130822|chrX:153670465-153670466|-/G|frameshift_variant	31.954861631926434	0.7126016770032289	1				NaN	NaN	0	NaN	1721	3142	4861
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4866	19.076	NaN	2415.9	30	0	406.34	0.106	+			14430	GTASLAQVHK	10	56	506.28290077438163	1010.5512486155633	2	506.2823486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTASLAQVHK_	ADCK1|p.Q416Pfs*27|1|0.38|ENSG00000063761|chr14:77931552-77931553|-/C|frameshift_variant;ENSG00000063761|ENST00000238561|ADCK1;nc|ENSG00000063761|Q86TW2-3|ADCK1;nc|ENSG00000063761|Q86TW2|ADCK1	47.95952297671804	0.47580206326914537	1				NaN	NaN	0	NaN	1722	3142	4861
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4867	19.078	NaN	1415.4	30	0	191.86	0.036			+	8337	EAKSDKGQPK	10	50	544.2903748441305	1086.566196755061	2	544.2915649414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EAKSDKGQPK_	REV__ENST00000341853.5_1_15:100340094-100345094:-|nuORF;REV__nc|ENSG00000182397|Q6ZS02|DNM1P46	46.45678178249821	0.4896490706773647	1				NaN	NaN	0	NaN	1723	3142	4861
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4877	19.1	NaN	4936.2	30	0	507.43	0.212			+	8884	EESSSEEDLRT	11	58	641.2758317788432	1280.5371106244863	2	641.276123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EESSSEEDLRT_	REV__ENSG00000165509|ENST00000298296|MAGEC3;REV__nc|ENSG00000165509|Q8TD91-2|MAGEC3	45.02220120713402	0.4892240028381124	1				NaN	NaN	0	NaN	1730	3145	4876
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4878	19.103	NaN	8447.2	30	0	3107	0.106				-1	 	0	64	465.23290919659803	928.4512654599961	2	465.2328186035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	1731	3145	4876
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4879	19.105	NaN	3378.1	30	0	919.02	0.106	+			4704	ATLTTTSATSK	11	56	541.2905027269443	NaN	0	541.2905883789062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATLTTTSATSK_	ENSG00000010244|ENST00000394670|ZNF207;ENST00000584696.1_1_17:30693734-30695045:+|nuORF;nc|ENSG00000010244|O43670-2|ZNF207;nc|ENSG00000010244|O43670-3|ZNF207;nc|ENSG00000010244|O43670|ZNF207	72.09557110113691	0.12082447305505499	1				NaN	NaN	0	NaN	1732	3145	4876
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4880	19.107	NaN	2032.8	30	0	449.02	0.106				-1	TAMPRSIVR	9	47	523.7921098523378	1045.5696667714756	2	524.6337280273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_TAM(Oxidation (M))PRSIVR_	ENSG00000204300|ENST00000375026|TMEM225	26.69291269510374	0.5537881896960711	1				NaN	NaN	0	NaN	1733	3145	4876
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4881	19.109	NaN	1952.3	30	0	305.33	0.106	+			41820	SVSSSTHFTR	10	56	554.7732333883914	NaN	0	554.773193359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVSSSTHFTR_	ENSG00000095015|ENST00000399503|MAP3K1	43.650786325866115	0.3457431322078509	1				NaN	NaN	0	NaN	1734	3145	4876
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4882	19.11	NaN	2253.6	30	0	433.94	0.106	+			15020	GTNGPVDLKK	10	51	514.7906398975991	1027.5667268619982	2	514.790283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTNGPVDLKK_	ENSG00000164305|ENST00000308394|CASP3	53.08895987439943	0.42869529153390606	1				NaN	NaN	0	NaN	1735	3145	4876
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4883	19.112	NaN	1049.7	30	0	179.2	0.034				-1	KKSLAICE	8	42	474.7635864309238	NaN	0	474.7630615234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_KKSLAIC(Carbamidomethyl (C))E_	DNAH17|p.D2341Tfs*111|1|0.32|ENSG00000187775|chr17:78486305-78486305|G/-|frameshift_variant;DNAH17|p.G2596Afs*13|1|0.33|ENSG00000187775|chr17:78479600-78479600|G/-|frameshift_variant;DNAH17|p.K2058Qfs*32|1|0.09|ENSG00000187775|chr17:78494691-78494692|-/G|frameshift_variant;DNAH17|p.K3895Nfs*2|1|0.24|ENSG00000187775|chr17:78439210-78439210|T/-|frameshift_variant;DNAH17|p.N4131Tfs*34|2|0.38|ENSG00000187775|chr17:78429136-78429136|G/-|frameshift_variant;DNAH17|p.R1580Gfs*23|1|0.38|ENSG00000187775|chr17:78506785-78506785|G/-|frameshift_variant;ENSG00000187775|ENST00000389840|DNAH17	29.14955571784316	1.7418937515398478	1				NaN	NaN	0	NaN	1736	3145	4876
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4896	19.14	NaN	7835.7	30	0	1397.8	0.214	+			41352	SVMAQVRQK	9	73	523.7921098523378	1045.5696667714756	2	523.7925415039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVMAQVRQK_	ENSG00000038358|ENST00000358933|EDC4;ENST00000572067.1_1_16:67917790-67918048:+|nuORF;nc|ENSG00000038358|Q6P2E9-2|EDC4	146.78539889680295	0.007618400906539062	1				NaN	NaN	0	NaN	1746	3148	4895
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4897	19.143	NaN	2669	30	0	823.19	0.106	+			39535	STFSGLAKHK	10	60	538.2984550455631	1074.582357157926	2	538.2987060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STFSGLAKHK_	ENSG00000019549|ENST00000020945|SNAI2	72.2432373244024	0.2589930451692646	1				NaN	NaN	0	NaN	1747	3148	4895
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4898	19.145	NaN	2208.4	30	0	816.74	0.106			+	-1	TRGCRGRR	8	38	340.18523045787913	NaN	0	340.1852111816406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_TRGC(Carbamidomethyl (C))RGRR_	REV__ENST00000429705.6_1_3:43328087-43344599:+|nuORF	25.57405402267927	1.7418937515398478	1				NaN	NaN	0	NaN	1748	3148	4895
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4899	19.147	NaN	1603.7	30	0	415.68	0.106	+			26215	LSSHQNSL	8	36	443.22493285751585	884.4353127818317	2	443.224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSSHQNSL_	UBAP2|p.S710N|1|0.5|ENSG00000137073|chr9:33932608-33932608|C/T|missense_variant	51.33545320467046	0.5859736979383976	1				NaN	NaN	0	NaN	1749	3148	4895
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4900	19.149	NaN	1101.6	30	0	167.14	0.106	+			48779	VTYMIPLGL	9	42	503.7875614427868	NaN	0	503.7873840332031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTYMIPLGL_	ENSG00000180638|ENST00000433844|SLC47A2;nc|ENSG00000180638|Q86VL8-2|SLC47A2;nc|ENSG00000180638|Q86VL8|SLC47A2	31.954861631926434	0.3162336699109506	1				NaN	NaN	0	NaN	1750	3148	4895
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4901	19.151	NaN	1681.2	30	0	570.56	0.106			+	31554	QLMWGDFG	8	28	477.211924767503	NaN	0	477.21197509765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QLMWGDFG_	REV__ENST00000307076.8_1_3:52568864-52569062:-|nuORF	12.959181472943097	1.7418937515398478	1				NaN	NaN	0	NaN	1751	3148	4895
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4902	19.152	NaN	1999.9	30	0	174.57	0.035	+			916	AEIEHHEM	8	49	498.2155904940946	994.4166280549892	2	498.2157287597656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AEIEHHEM_	ENSG00000163939|ENST00000707071|PBRM1;nc|ENSG00000163939|Q86U86-2|PBRM1;nc|ENSG00000163939|Q86U86-3|PBRM1;nc|ENSG00000163939|Q86U86-4|PBRM1;nc|ENSG00000163939|Q86U86-5|PBRM1;nc|ENSG00000163939|Q86U86-6|PBRM1;nc|ENSG00000163939|Q86U86-7|PBRM1;nc|ENSG00000163939|Q86U86-8|PBRM1;nc|ENSG00000163939|Q86U86-9|PBRM1;nc|ENSG00000163939|Q86U86|PBRM1;PBRM1|p.H1521Pfs*95|1|0.12|ENSG00000163939|chr3:52554771-52554772|-/G|frameshift_variant;PBRM1|p.K991Nfs*23|1|0.28|ENSG00000163939|chr3:52587503-52587503|T/-|frameshift_variant;PBRM1|p.L1349Wfs*35|1|0.5|ENSG00000163939|chr3:52563324-52563324|G/-|frameshift_variant;PBRM1|p.N955Tfs*59|2|0.31|ENSG00000163939|chr3:52589171-52589171|T/-|frameshift_variant	73.97473282117947	0.3737790450121076	1				NaN	NaN	0	NaN	1752	3148	4895
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4909	19.17	NaN	2312.3	30	0	224.86	0.214	+			9394	EKELGERR	8	54	508.77804353424114	1015.5415341352823	2	508.7778015136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EKELGERR_	ENSG00000197275|ENST00000336148|RAD54B;RAD54B|p.F714Lfs*5|1|0.29|ENSG00000197275|chr8:94380250-94380250|A/-|frameshift_variant	34.172542307311794	0.6954784234644539	1				NaN	NaN	0	NaN	1756	3151	4908
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4910	19.174	NaN	2124.3	30	0	1198.9	0.106			+	29980	PPARPGPSSTG	11	37	512.2646652571452	1022.5147775810905	2	512.2645263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PPARPGPSSTG_	REV__ENST00000374316.9_1_6:33588911-33589319:+|nuORF	19.1035232394073	0.7810393085260824	1				NaN	NaN	0	NaN	1757	3151	4908
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4911	19.176	NaN	1611.7	30	0	273.34	0.106			+	40149	STQLPSAQIQ	10	51	536.7858896818624	NaN	0	536.7860717773438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STQLPSAQIQ_	REV__nc|ENSG00000198022|A6NJ88|SAGE2P	47.95952297671804	0.31850267256932663	1				NaN	NaN	0	NaN	1758	3151	4908
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4912	19.178	NaN	944.35	30	0	177.32	0.035	+			30423	PWWVLIGM	8	40	501.2665604188766	1000.5185679045533	2	501.26580810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PWWVLIGM_	ADAMTSL3|p.F1172Yfs*20|1|0.12|ENSG00000156218|chr15:83983142-83983143|-/A|frameshift_variant;ADAMTSL3|p.F477*|1|0.29|ENSG00000156218|chr15:83892848-83892849|TG/-|frameshift_variant;ADAMTSL3|p.H1300Ifs*18|1|0.33|ENSG00000156218|chr15:83991138-83991138|C/-|frameshift_variant;ADAMTSL3|p.N1166Kfs*26|1|0.4|ENSG00000156218|chr15:83983119-83983120|-/A|frameshift_variant;ADAMTSL3|p.R1207Gfs*32|1|0.3|ENSG00000156218|chr15:83983243-83983243|A/-|frameshift_variant;ENSG00000156218|ENST00000286744|ADAMTSL3;ENST00000561483.5_1_15:84323016-84694242:+|nuORF;ENST00000569510.5_1_15:84323016-84530322:+|nuORF;nc|ENSG00000156218|P82987-2|ADAMTSL3	33.49298260027079	0.7007254697536482	1				NaN	NaN	0	NaN	1759	3151	4908
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4923	19.201	NaN	2582.8	30	0	321.92	0.214	+			9429	EKKGQDSEP	9	56	509.24607731790616	1016.4776017026123	2	509.2459716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EKKGQDSEP_	ENSG00000010818|ENST00000367603|HIVEP2;HIVEP2|p.E2269Sfs*37|1|0.07|ENSG00000010818|chr6:142753643-142753643|C/-|frameshift_variant;HIVEP2|p.N2325Kfs*44|1|0.35|ENSG00000010818|chr6:142753473-142753474|-/T|frameshift_variant;HIVEP2|p.S1616Afs*32|1|0.48|ENSG00000010818|chr6:142769894-142769894|G/-|frameshift_variant	35.15202426646627	0.4747332964206883	1				NaN	NaN	0	NaN	1767	3154	4922
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4924	19.205	NaN	3695	30	0	374.17	0.106	+			24196	LEQQELREK	9	64	586.8170556959075	1171.6195584586148	2	586.8167114257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LEQQELREK_	ENSG00000115761|ENST00000381685|NOL10;nc|ENSG00000115761|Q9BSC4-2|NOL10;nc|ENSG00000115761|Q9BSC4-4|NOL10	79.71258880314673	0.09879134589249085	1				NaN	NaN	0	NaN	1768	3154	4922
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4925	19.207	NaN	1976.8	30	0	582.36	0.034			+	-1	GDAHCQSCA	9	47	474.6691292887439	NaN	0	474.6688537597656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_GDAHCQSC(Carbamidomethyl (C))A_	REV__ENST00000355315.7_2_8:57130110-57130206:+|nuORF	27.882242232435846	0.3367954786602879	1				NaN	NaN	0	NaN	1769	3154	4922
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4933	19.226	NaN	15507	30	0	3666	0.214			+	31993	QRGHRIQL	8	58	336.5340967109813	1006.580460733144	3	336.5343322753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QRGHRIQL_	REV__ENST00000381154.5_1_X:2838703-2839996:-|nuORF	42.47446043378293	0.6409579893742323	1				NaN	NaN	0	NaN	1774	3157	4932
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4934	19.23	NaN	2250.3	30	0	305.79	0.106	+			35526	SAVGTIVKK	9	50	451.7869087044885	901.559264475777	2	451.7864685058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAVGTIVKK_	ENSG00000161526|ENST00000584667|SAP30BP;ENST00000293208.13_1_17:73701692-73702598:+|nuORF;ENST00000578756.5_1_17:73699860-73702598:+|nuORF;ENST00000579005.1_1_17:73702284-73702598:+|nuORF;ENST00000580322.5_1_17:73702024-73702598:+|nuORF;ENST00000580601.5_1_17:73689468-73702598:+|nuORF;ENST00000583329.5_1_17:73699767-73702598:+|nuORF;ENST00000584557.1_1_17:73702349-73702598:+|nuORF;nc|ENSG00000161526|Q9UHR5-2|SAP30BP	95.81516180277367	0.04847050768394289	1				NaN	NaN	0	NaN	1775	3157	4932
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4935	19.232	NaN	2994.9	30	0	352.15	0.106	+			35384	SAQDFASRAK	10	60	540.7765254718852	1079.5384980105703	2	540.7783813476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAQDFASRAK_	ENSG00000062716|ENST00000262291|VMP1;nc|ENSG00000062716|Q96GC9-2|VMP1;TAOK1-VMP1|1|fusion	50.033510581677724	0.4566913063131936	1				NaN	NaN	0	NaN	1776	3157	4932
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4936	19.234	NaN	2869	30	0	362.07	0.106	+			15495	GVANALAHK	9	55	440.753484126455	879.4924153197101	2	440.7530822753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GVANALAHK_	ENSG00000223609|ENST00000650601|HBD;ENSG00000244734|ENST00000335295|HBB	108.08749611321984	0.03094949498378333	1				NaN	NaN	0	NaN	1777	3157	4932
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4937	19.236	NaN	1492.4	30	0	180.31	0.034	+			50485	YAKNGQDL	8	45	454.72733354865204	907.4401141641041	2	454.7273254394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YAKNGQDL_	ENSG00000153187|ENST00000640218|HNRNPU;nc|ENSG00000153187|Q00839-2|HNRNPU	62.107414245175825	0.4809183816468817	1				NaN	NaN	0	NaN	1778	3157	4932
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4949	19.261	NaN	13592	30	0	4129.1	0.214	+			5409	ATYHGSFSTK	10	52	366.84530985350557	1097.5141001607167	3	366.8453674316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATYHGSFSTK_	ENSG00000163359|ENST00000295550|COL6A3;ENST00000491769.1_1_2:238233419-238250825:-|nuORF;ENST00000493608.1_1_2:238242084-238243404:-|nuORF;nc|ENSG00000163359|P12111-2|COL6A3;nc|ENSG00000163359|P12111-4|COL6A3	45.02220120713402	0.5028680121232791	1				NaN	NaN	0	NaN	1787	3160	4948
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4950	19.265	NaN	2565.3	30	0	599.04	0.106			+	20745	KGVGVHAG	8	46	362.70860428632585	723.4026556394517	2	362.7087097167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KGVGVHAG_	REV__ENSG00000108826|ENST00000225969|MRPL27	37.028477286268924	0.6747514403204248	1				NaN	NaN	0	NaN	1788	3160	4948
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4951	19.267	NaN	12633	30	0	1480.4	0.106				-1	TWYRHYRCCRQ	11	96	835.8722418547295	NaN	0	835.8723754882812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))TWYRHYRCC(Carbamidomethyl (C))RQ_	ENST00000448464.6_1_8:95941986-95942052:-|nuORF	2.3454780930455223	0.456735970842152	1				NaN	NaN	0	NaN	1789	3160	4948
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4952	19.269	NaN	5295	30	0	849.01	0.106	+			49132	VVMAADRSLKK	11	69	609.3550634033522	1216.6955738735044	2	609.35546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVMAADRSLKK_	ENSG00000189241|ENST00000368608|TSPYL1	116.83681978309235	0.026261437461494754	1				NaN	NaN	0	NaN	1790	3160	4948
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4953	19.27	NaN	1716.1	30	0	309.25	0.106			+	-1	GVDSSIRHGG	10	34	513.7530517578125	NaN	0	513.7530517578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))GVDSSIRHGG_	REV__ABCA3|p.V1442A|1|0.13|ENSG00000167972|chr16:2281061-2281061|A/G|missense_variant;REV__ENSG00000167972|ENST00000301732|ABCA3	14.137123925751023	0.4201028297492154	1				NaN	NaN	0	NaN	1791	3160	4948
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4954	19.272	NaN	2598	30	0	464.19	0.106	+			40684	SVASSRSSVLK	11	57	560.8193106721003	1119.6240684110005	2	560.8198852539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVASSRSSVLK_	ENSG00000100697|ENST00000343455|DICER1;nc|ENSG00000100697|Q9UPY3-2|DICER1;nc|ENSG00000100697|Q9UPY3-3|DICER1	35.17822180527639	0.6208003396870814	1				NaN	NaN	0	NaN	1792	3160	4948
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4955	19.274	NaN	2484.6	30	0	206.8	0.035	+			19658	KDLNKVIGE	9	65	508.2927440648757	1014.5709351965514	2	508.2928466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KDLNKVIGE_	tr|U7SV46|U7SV46_FUSNUAutotransporterdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01511PE=4SV=1	62.107414245175825	0.1960472003779324	1				NaN	NaN	0	NaN	1793	3160	4948
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4969	19.304	NaN	3711	30	0	602.01	0.214	+			49090	VVLEKAMHK	9	63	527.8073270511545	1053.600101169109	2	527.8076782226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVLEKAMHK_	ENSG00000132669|ENST00000255006|RIN2;nc|ENSG00000132669|Q8WYP3-2|RIN2;RIN2|p.D879Gfs*3|1|0.16|ENSG00000132669|chr20:20000731-20000732|-/G|frameshift_variant	85.16082228582465	0.07850854922700509	1				NaN	NaN	0	NaN	1804	3163	4968
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4970	19.307	NaN	7420.7	30	0	709.36	0.106				-1	LPMNQKNVL	9	68	358.1985405127842	1071.5737921385526	3	358.19873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LPM(Oxidation (M))NQKNVL_	ENST00000548220.1_1_12:71054984-71148538:-|nuORF	42.396135135203025	0.392153681582562	1				NaN	NaN	0	NaN	1805	3163	4968
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4971	19.309	NaN	1824.3	30	0	436.83	0.106			+	25086	LLNCKNEA	8	54	452.7312615496209	903.4479701660418	2	453.23193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LLNCKNEA_	REV__ENSG00000166037|ENST00000325542|CEP57;REV__ENST00000536587.5_1_11:95546139-95548377:+|nuORF;REV__ENST00000539855.5_1_11:95532492-95564417:+|nuORF;REV__ENST00000541768.1_1_11:95546181-95551118:+|nuORF;REV__nc|ENSG00000166037|Q86XR8-2|CEP57;REV__nc|ENSG00000166037|Q86XR8-3|CEP57;REV__nc|ENSG00000166037|Q86XR8-4|CEP57;REV__nc|ENSG00000166037|Q86XR8-5|CEP57	25.450171626174864	0.7628259754767981	1				NaN	NaN	0	NaN	1806	3163	4968
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4972	19.311	NaN	2574.8	30	0	805.23	0.106	+			34575	RVMKALVNR	9	64	543.8318937291718	1085.6492345251436	2	543.8327026367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RVMKALVNR_	ENSG00000149136|ENST00000278412|SSRP1;ENST00000293880.9_1_11:57098199-57100416:-|nuORF	90.60085204095205	0.06317133949006545	1				NaN	NaN	0	NaN	1807	3163	4968
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4973	19.313	NaN	2201.3	30	0	431.52	0.106	+			6441	AVYDRPGASPK	11	60	580.8064025045411	1159.598252075882	2	580.806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVYDRPGASPK_	ENSG00000030066|ENST00000378460|NUP160;nc|ENSG00000030066|Q12769|NUP160	83.6470233535746	0.12478191950840195	1				NaN	NaN	0	NaN	1808	3163	4968
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4974	19.315	NaN	2669.7	30	0	239.25	0.035	+			26822	LVSTPVRTK	9	58	500.8109875914354	999.6074222496708	2	500.81060791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LVSTPVRTK_	ENSG00000141027|ENST00000268712|NCOR1;ENST00000464381.5_1_17:15935612-15961439:-|nuORF;ENST00000470782.5_1_17:15935612-15971511:-|nuORF;ENST00000472189.1_1_17:15960700-15961247:-|nuORF;nc|ENSG00000141027|O75376-2|NCOR1	60.11826168202944	0.21262886028301267	1				NaN	NaN	0	NaN	1809	3163	4968
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4975	19.315	NaN	1509	30	0	291.37	0.144	+			18862	IVFLKKNYK	9	41	384.9107666015625	NaN	0	384.9107666015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IVFLKKNYK_	tr|U7SU78|U7SU78_FUSNUDNA3'-5'helicaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01130PE=4SV=1	25.57405402267927	0.3484490411150625	1				NaN	NaN	0	NaN	1810	3163	4968
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4987	19.343	NaN	1762.9	30	0	193.95	0.214				-1	VICSKLAAK	9	57	495.29230027198133	988.5700476107627	2	495.29241943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_VIC(Carbamidomethyl (C))SKLAAK_	ENSG00000119888|ENST00000263735|EPCAM	68.78682469695295	0.14603441672067394	1				NaN	NaN	0	NaN	1819	3166	4986
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4988	19.347	NaN	1998.5	30	0	346.58	0.106			+	13233	GIIRGVTTK	9	50	472.7979022136592	943.5812514941184	2	472.79766845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GIIRGVTTK_	REV__ENSG00000185875|ENST00000376356|THNSL1	65.46538089061403	0.16805504838372562	1				NaN	NaN	0	NaN	1820	3166	4986
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4989	19.349	NaN	1972	30	0	255.85	0.106	+			20588	KGAAERGPRR	10	53	549.3164672851562	NaN	0	549.3164672851562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KGAAERGPRR_	ENST00000561100.1_3_15:40212954-40213002:-|nuORF	39.252832667884924	0.37128895876774715	1				NaN	NaN	0	NaN	1821	3166	4986
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4990	19.35	NaN	4407.1	30	0	1873	0.106	+			36811	SIEKGGSLPK	10	40	339.1974471045321	1014.5705119137963	3	339.1976013183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SIEKGGSLPK_	ENSG00000181163|ENST00000296930|NPM1;nc|ENSG00000181163|P06748-2|NPM1	40.05817265558897	0.5486090488315611	1				NaN	NaN	0	NaN	1822	3166	4986
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4991	19.352	NaN	1387.5	30	0	247.36	0.106	+			15272	GTTMYIHNK	9	36	532.7627563476562	NaN	0	532.7627563476562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTTMYIHNK_	ENSG00000146433|ENST00000684151|TMEM181;nc|ENSG00000146433|Q9P2C4-1|TMEM181	27.882242232435846	0.3367954786602879	1				NaN	NaN	0	NaN	1823	3166	4986
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4992	19.354	NaN	1723.3	30	0	500.43	0.106			+	31902	QQHPNYVP	8	31	491.7415466308594	NaN	0	491.7415466308594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QQHPNYVP_	REV__ENSG00000161813|ENST00000398473|LARP4;REV__ENST00000521120.1_1_12:50835423-50848201:+|nuORF;REV__LARP4|p.N373Ifs*3|1|0.26|ENSG00000161813|chr12:50454408-50454408|A/-|frameshift_variant;REV__nc|ENSG00000161813|Q71RC2-2|LARP4;REV__nc|ENSG00000161813|Q71RC2-3|LARP4;REV__nc|ENSG00000161813|Q71RC2-4|LARP4;REV__nc|ENSG00000161813|Q71RC2-6|LARP4;REV__nc|ENSG00000161813|Q71RC2-7|LARP4	21.70233525837049	1.7418937515398478	1				NaN	NaN	0	NaN	1824	3166	4986
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4993	19.356	NaN	2138.9	30	0	404.05	0.036				-1	CIYGGLGLGGL	11	53	540.2828535250513	1078.5511541169026	2	540.2836303710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_C(Carbamidomethyl (C))IYGGLGLGGL_	ENSG00000204482|ENST00000438075|LST1;nc|ENSG00000204482|O00453-11|LST1;nc|ENSG00000204482|O00453-12|LST1;nc|ENSG00000204482|O00453-5|LST1	31.954861631926434	0.6546107591430316	1				NaN	NaN	0	NaN	1825	3166	4986
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	4999	19.372	NaN	4151.2	30	0	807.33	0.214	+			39456	STEPPYSQK	9	57	518.7509490556279	1035.4873451780556	2	518.7510986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STEPPYSQK_	EEF1A1|p.P263Lfs*27|1|0.36|ENSG00000156508|chr6:73518595-73518595|G/-|frameshift_variant;ENSG00000156508|ENST00000309268|EEF1A1;ENST00000359165.5_1_12:19610040-19610154:-|nuORF;ENST00000401075.3_1_1:31961199-31961370:-|nuORF;ENST00000434005.1_1_7:22551057-22551540:-|nuORF;ENST00000443590.1_1_2:107314616-107314670:-|nuORF;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	65.46538089061403	0.16805504838372562	1				NaN	NaN	0	NaN	1828	3169	4998
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5000	19.376	NaN	2518.1	30	0	374.13	0.106	+			22962	KVQTEVLQK	9	61	536.8219560692584	1071.6293592053166	2	536.8226928710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVQTEVLQK_	ENSG00000117395|ENST00000236051|EBNA1BP2;ENST00000463906.1_1_1:43630116-43636618:-|nuORF	120.8684288430529	0.02067403653475984	1				NaN	NaN	0	NaN	1829	3169	4998
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5001	19.378	NaN	2375.1	30	0	342.64	0.106	+			47930	VSMDNSNKYTK	11	67	643.8051937447672	1285.5958345563342	2	643.8052978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSMDNSNKYTK_	ENSG00000118689|ENST00000406360|FOXO3;ENST00000395675.4_1_17:18575090-18575600:-|nuORF;nc|ENSG00000118689|O43524-2|FOXO3	68.84614121027924	0.24535906747804975	1				NaN	NaN	0	NaN	1830	3169	4998
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5002	19.379	NaN	3833.3	30	0	2126.8	0.106			+	48765	VTVSSTVP	8	37	395.22043993683195	NaN	0	395.22021484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTVSSTVP_	REV__ENST00000369902.7_1_10:104389918-104390017:+|nuORF	28.2542754592877	1.7418937515398478	1				NaN	NaN	0	NaN	1831	3169	4998
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5003	19.381	NaN	1547.3	30	0	493	0.106			+	-1	TCVSCRRMQRC	11	36	757.3349274633729	1512.6553019935457	2	757.33544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	3 Carbamidomethyl (C)	_TC(Carbamidomethyl (C))VSC(Carbamidomethyl (C))RRMQRC(Carbamidomethyl (C))_	REV__ENST00000524838.5_1_11:67374453-67377304:+|nuORF;REV__ENST00000528377.1_1_11:67375903-67377304:+|nuORF	13.45404412870281	0.8074920481021843	1				NaN	NaN	0	NaN	1832	3169	4998
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5004	19.383	NaN	1020.4	30	0	149.03	0.106	+			24919	LKQLHENQ	8	48	505.2745361328125	NaN	0	505.2745361328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LKQLHENQ_	DMTF1|p.N415Tfs*28|1|0.3|ENSG00000135164|chr7:87188128-87188128|A/-|frameshift_variant;ENSG00000135164|ENST00000331242|DMTF1;ENST00000425406.5_1_7:86817376-86824453:+|nuORF;ENST00000447863.5_1_7:86811523-86824453:+|nuORF;ENST00000547146.6_1_7:86813892-86824453:+|nuORF;nc|ENSG00000135164|Q9Y222-5|DMTF1	58.78195531508484	1.7418937515398478	1				NaN	NaN	0	NaN	1833	3169	4998
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5005	19.385	NaN	1384.3	30	0	179.58	0.037	+			26862	LVYTIEQPSN	10	41	582.298583984375	NaN	0	582.298583984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LVYTIEQPSN_	CSPG4|p.E1665Sfs*10|1|0.39|ENSG00000173546|chr15:75677845-75677845|G/-|frameshift_variant;ENSG00000173546|ENST00000308508|CSPG4;ENST00000567704.5_1_15:78194581-78196635:+|nuORF	24.519189625965996	0.41966695327750003	1				NaN	NaN	0	NaN	1834	3169	4998
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5015	19.407	NaN	4254	30	0	458.88	0.214	+			5446	ATYSVGMQK	9	58	500.7412523643254	999.4679517954509	2	500.7419128417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ATYSVGM(Oxidation (M))QK_	ENSG00000131941|ENST00000254260|RHPN2;ENST00000592247.1_1_19:33470904-33481620:-|nuORF;nc|ENSG00000131941|Q8IUC4-2|RHPN2;nc|ENSG00000258628|A8MT19|RHPN2P1	67.49366992349736	0.1516260258713357	1				NaN	NaN	0	NaN	1841	3172	5014
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5016	19.41	NaN	9866.2	30	0	1281.1	0.106	+			42055	SYAKSTQRF	9	81	544.2799253931023	1086.5452978530045	2	544.2804565429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SYAKSTQRF_	ENST00000430580.6_1_1:16939836-16939869:-|nuORF	80.91624569148213	0.09358672614454815	1				NaN	NaN	0	NaN	1842	3172	5014
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5017	19.412	NaN	4448.1	30	0	614.01	0.106	+			6086	AVNIVCHSK	9	56	485.760267884821	969.5059828364421	2	485.7606201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVNIVCHSK_	ENSG00000159352|ENST00000368884|PSMD4;ENST00000461434.1_1_1:151227258-151234901:+|nuORF;ENST00000462970.5_1_1:151227258-151237442:+|nuORF;nc|ENSG00000159352|P55036-2|PSMD4	102.0615471778698	0.03709830720253279	1				NaN	NaN	0	NaN	1843	3172	5014
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5018	19.414	NaN	5459.6	30	0	1066.5	0.106				-1	TSEGGKCRR	9	55	525.7588075856738	1049.5030622381475	2	525.759033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_TSEGGKC(Carbamidomethyl (C))RR_	ENST00000220244.7_1_15:81241617-81241845:+|nuORF	35.61828744233558	0.47037581924408073	1				NaN	NaN	0	NaN	1844	3172	5014
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5019	19.416	NaN	3865.8	30	0	458.43	0.106	+			11449	FNDPNAKEM	9	71	541.2345660482218	1080.4545791632436	2	541.2350463867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_FNDPNAKEM(Oxidation (M))_	ENSG00000056097|ENST00000265069|ZFR	120.30596017624542	0.02101454110788768	1				NaN	NaN	0	NaN	1845	3172	5014
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5020	19.418	NaN	7648.5	30	0	749.02	0.106			+	24755	LHTIESDRF	9	74	559.2852330342536	1116.555913135307	2	559.2859497070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LHTIESDRF_	REV__ENSG00000204344|ENST00000685781|STK19;REV__ENST00000466132.5_1_6:31939873-31948823:+|nuORF;REV__ENST00000469907.1_1_6:31940369-31948823:+|nuORF;REV__ENST00000491861.5_1_6:31940339-31948823:+|nuORF;REV__ENST00000492583.5_1_6:31939873-31948823:+|nuORF;REV__nc|ENSG00000204344|P49842-1|STK19;REV__nc|ENSG00000204344|P49842-2|STK19;REV__nc|ENSG00000204344|P49842-3|STK19	75.04331003522576	0.118981335847003	1				NaN	NaN	0	NaN	1846	3172	5014
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5021	19.419	NaN	1416.9	30	0	164.86	0.034			+	2060	ALALHGATGL	10	40	462.26863808914464	NaN	0	462.2686462402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ALALHGATGL_	REV__GMPPB|p.P89H|1|0.34|ENSG00000173540|chr3:49723108-49723108|G/T|missense_variant	30.503639358989545	0.4000169810673414	1				NaN	NaN	0	NaN	1847	3172	5014
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5027	19.435	NaN	14066	30	0	2461	0.214	+			5861	AVIQVGKEK	9	74	486.2977146375539	970.5808763419078	2	486.2976379394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVIQVGKEK_	ENSG00000156675|ENST00000330843|RAB11FIP1;nc|ENSG00000156675|Q6WKZ4-3|RAB11FIP1;nc|ENSG00000156675|Q6WKZ4-5|RAB11FIP1;RAB11FIP1|p.E639Rfs*27|1|0.12|ENSG00000156675|chr8:37872887-37872888|-/T|frameshift_variant;RAB11FIP1|p.Q714Tfs*22|1|0.3|ENSG00000156675|chr8:37872662-37872663|-/T|frameshift_variant	127.46168284122857	0.016682644177004526	1				NaN	NaN	0	NaN	1850	3175	5026
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5028	19.439	NaN	5008.8	30	0	1269.4	0.106			+	19574	KCVSDPQK	8	47	452.7312615496209	903.4479701660418	2	452.7311706542969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KCVSDPQK_	REV__ATAD2B|p.F468Lfs*9|4|0.19|ENSG00000119778|chr2:23863456-23863456|A/-|frameshift_variant;REV__ATAD2B|p.G472Efs*5|1|0.03|ENSG00000119778|chr2:23863447-23863447|T/-|frameshift_variant;REV__ATAD2B|p.K307Rfs*57|3|0.21|ENSG00000119778|chr2:23875886-23875886|T/-|frameshift_variant;REV__ATAD2B|p.T1377Rfs*19|1|0.39|ENSG00000119778|chr2:23754724-23754724|T/-|frameshift_variant;REV__ENSG00000119778|ENST00000238789|ATAD2B;REV__nc|ENSG00000119778|Q9ULI0-2|ATAD2B	64.20726635412375	0.4601301477144759	1				NaN	NaN	0	NaN	1851	3175	5026
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5029	19.441	NaN	5627.6	30	0	2697.2	0.106	+			42056	SYAKSTQRF	9	46	363.1891977386334	1086.5457638161004	3	363.18927001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SYAKSTQRF_	ENST00000430580.6_1_1:16939836-16939869:-|nuORF	40.05817265558897	0.419577045485086	1				NaN	NaN	0	NaN	1852	3175	5026
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5030	19.443	NaN	11452	30	0	7292.4	0.106			+	18077	IKGLELNKG	9	53	324.53422757072804	970.5808533123841	3	324.5342102050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IKGLELNKG_	REV__ENSG00000013810|ENST00000313288|TACC3;REV__ENST00000470808.1_1_4:1741140-1742845:+|nuORF;REV__TACC3|p.H666R|1|0.09|ENSG00000013810|chr4:1739757-1739757|A/G|missense_variant	44.116797842482775	0.37197099687881774	1				NaN	NaN	0	NaN	1853	3175	5026
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5031	19.445	NaN	1401.6	30	0	168.94	0.106	+			20753	KGYEGKTHKG	10	50	552.7935569538869	1103.5725609745737	2	552.7957763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KGYEGKTHKG_	ENSG00000145220|ENST00000343470|LYAR;LYAR|p.K286Rfs*2|1|0.4|ENSG00000145220|chr4:4273645-4273645|T/-|frameshift_variant;LYAR|p.L319Vfs*10|1|0.04|ENSG00000145220|chr4:4268580-4268581|-/AATGTAC|frameshift_variant	30.317721548370564	0.6322445173429027	1				NaN	NaN	0	NaN	1854	3175	5026
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5032	19.446	NaN	722.39	30	0	193.58	0.106			+	36366	SETAVTST	8	21	398.1900340338916	794.3655151345832	2	398.1903076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SETAVTST_	REV__BPTF|p.D2844Afs*20|1|0.08|ENSG00000171634|chr17:67959766-67959767|-/C|frameshift_variant;REV__BPTF|p.K2718Nfs*36|3|0.12|ENSG00000171634|chr17:67948150-67948150|A/-|frameshift_variant;REV__ENSG00000171634|ENST00000306378|BPTF;REV__nc|ENSG00000171634|Q12830-4|BPTF;REV__nc|ENSG00000171634|Q12830|BPTF	26.79610172149135	0.7524337208463756	1				NaN	NaN	0	NaN	1855	3175	5026
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5033	19.448	NaN	4074.5	30	0	992.53	0.032			+	24938	LKVAGGEK	8	60	401.2450877459265	800.4756225586531	2	401.74652099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LKVAGGEK_	REV__EML5|p.N1682Mfs*7|1|0.04|ENSG00000165521|chr14:88621246-88621246|T/-|frameshift_variant;REV__EML6|p.N1675Mfs*7|2|0.32|ENSG00000214595|chr2:54962572-54962572|A/-|frameshift_variant;REV__EML6|p.R1767Efs*19|1|0.37|ENSG00000214595|chr2:54964127-54964127|C/-|frameshift_variant;REV__ENSG00000165521|ENST00000554922|EML5;REV__ENSG00000214595|ENST00000356458|EML6;REV__ENST00000490828.5_1_2:55184973-55193987:+|nuORF;REV__ENST00000553281.5_1_14:89088194-89171927:-|nuORF;REV__nc|ENSG00000165521|Q05BV3|EML5;REV__nc|ENSG00000214595|Q6ZMW3-2|EML6	84.9155231211612	0.2928622555056503	1				NaN	NaN	0	NaN	1856	3175	5026
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5041	19.468	NaN	8067.2	30	0	2701.9	0.214	+			14559	GTFGKVKVGK	10	52	340.87811313120903	1019.6125099938272	3	340.87811279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTFGKVKVGK_	ENSG00000132356|ENST00000397128|PRKAA1;ENST00000397006.2_1_5:40777312-40798264:-|nuORF;ENST00000511248.1_1_5:40777545-40798228:-|nuORF;nc|ENSG00000132356|Q13131-2|PRKAA1	31.634271133179894	0.6214930414500597	1				NaN	NaN	0	NaN	1861	3178	5040
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5042	19.471	NaN	3450.2	30	0	641.88	0.106	+			3446	ASQQNATVLK	10	59	530.2935148756924	1058.5724768181847	2	530.29345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASQQNATVLK_	ENST00000427574.6_1_11:76156149-76164398:+|nuORF	99.01295224348159	0.08062808246117298	1				NaN	NaN	0	NaN	1862	3178	5040
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5043	19.473	NaN	3772.7	30	0	563.55	0.106				-1	CAALRKRPE	9	58	550.8030461105491	1099.591539287898	2	550.8042602539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_C(Carbamidomethyl (C))AALRKRPE_	LRRC7|p.R23C|2|0.21|ENSG00000033122|chr1:69678445-69678445|C/T|missense_variant	35.61828744233558	0.47037581924408073	1				NaN	NaN	0	NaN	1863	3178	5040
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5044	19.475	NaN	1130.6	30	0	201.68	0.106	+			130	AAGASKRDSQ	10	40	495.7531953640572	NaN	0	495.7532653808594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AAGASKRDSQ_	ENST00000388712.7_2_9:88694245-88714458:-|nuORF	22.579656572578934	0.4201028297492154	1				NaN	NaN	0	NaN	1864	3178	5040
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5045	19.477	NaN	1532.8	30	0	186.97	0.106				-1	CFKCEYCATTL	11	44	698.2915649414062	NaN	0	698.2915649414062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))FKC(Carbamidomethyl (C))EYCATTL_	ENSG00000243156|ENST00000441493|MICAL3;MICAL3|p.A1313Lfs*17|1|0.24|ENSG00000243156|chr22:17818727-17818727|G/-|frameshift_variant;MICAL3|p.R1499Gfs*106|7|0.44|ENSG00000243156|chr22:17818166-17818166|G/-|frameshift_variant;MICAL3|p.R1706Afs*24|1|0.3|ENSG00000243156|chr22:17817545-17817545|G/-|frameshift_variant;nc|ENSG00000243156|Q7RTP6-2|MICAL3;nc|ENSG00000243156|Q7RTP6-3|MICAL3;nc|ENSG00000243156|Q7RTP6-4|MICAL3;nc|ENSG00000243156|Q7RTP6-5|MICAL3	11.635926663890343	0.456735970842152	1				NaN	NaN	0	NaN	1865	3178	5040
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5046	19.479	NaN	2774.7	30	0	805.67	0.106			+	9809	EPEIIKMQL	9	40	367.5378821779159	1099.5918171339476	3	367.5379333496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EPEIIKMQL_	REV__EIF2AK1|p.Q600P|1|0.34|ENSG00000086232|chr7:6024767-6024767|T/G|missense_variant	26.69291269510374	0.5537881896960711	1				NaN	NaN	0	NaN	1866	3178	5040
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5047	19.481	NaN	1200.7	30	0	255.07	0.034			+	49161	VVMMNQPK	8	44	473.74530884663073	945.4760647600615	2	473.7452697753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VVMMNQPK_	REV__ENSG00000129636|ENST00000320640|ITFG1;REV__ENST00000320640.10_1_16:47347733-47399754:-|nuORF;REV__ENST00000569551.6_1_16:47399687-47486648:-|nuORF	37.028477286268924	0.6747514403204248	1				NaN	NaN	0	NaN	1867	3178	5040
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5053	19.497	NaN	8989.5	30	0	1258.9	0.214	+			38853	SSNSMQTIQK	10	66	562.2736390763541	1122.5327252195082	2	562.2752685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSNSMQTIQK_	ENSG00000111057|ENST00000388835|KRT18;ENST00000446618.1_1_22:19245879-19246326:+|nuORF;ENST00000447938.1_1_21:21797263-21797497:-|nuORF;ENST00000506277.1_1_5:36886275-36886596:+|nuORF	157.3448221729694	0.007191409758142479	1				NaN	NaN	0	NaN	1870	3181	5052
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5054	19.5	NaN	4631.3	30	0	623.68	0.106				-1	ATYSVGMQK	9	69	500.7412523643254	999.4679517954509	2	501.2410888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_ATYSVGM(Oxidation (M))QK_	ENSG00000131941|ENST00000254260|RHPN2;ENST00000592247.1_1_19:33470904-33481620:-|nuORF;nc|ENSG00000131941|Q8IUC4-2|RHPN2;nc|ENSG00000258628|A8MT19|RHPN2P1	49.44154591367651	0.3095138337212152	1				NaN	NaN	0	NaN	1871	3181	5052
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5055	19.502	NaN	4000.1	30	0	807.86	0.106			+	-1	ALDDMDLMH	9	53	538.7231952580441	1075.4318375828882	2	538.7235107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_ALDDM(Oxidation (M))DLMH_	REV__ENSG00000119231|ENST00000323460|SENP5;REV__nc|ENSG00000119231|Q96HI0-2|SENP5	31.954861631926434	0.5046124803899898	1				NaN	NaN	0	NaN	1872	3181	5052
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5056	19.504	NaN	1976	30	0	286.89	0.106	+			15492	GVALALRKK	9	56	478.3240303102063	954.6335076872126	2	478.3240051269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GVALALRKK_	ENSG00000099968|ENST00000317582|BCL2L13;ENST00000485631.1_1_22:18189492-18210297:+|nuORF;nc|ENSG00000099968|Q9BXK5-4|BCL2L13	51.33545320467046	0.2872990594074956	1				NaN	NaN	0	NaN	1873	3181	5052
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5057	19.506	NaN	1260.9	30	0	297.24	0.106	+			30601	QAQLQREKE	9	38	565.3041381835938	NaN	0	565.3041381835938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QAQLQREKE_	CEP57L1|p.F288Lfs*3|1|0.37|ENSG00000183137|chr6:109159307-109159307|T/-|frameshift_variant;CEP57L1|p.N421Ifs*7|1|0.13|ENSG00000183137|chr6:109162844-109162844|A/-|frameshift_variant;ENSG00000183137|ENST00000517392|CEP57L1;nc|ENSG00000183137|Q8IYX8-2|CEP57L1	32.75053402867276	0.3122164853807509	1				NaN	NaN	0	NaN	1874	3181	5052
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5058	19.508	NaN	791.19	30	0	168.47	0.106	+			22495	KTNPTIGPAP	10	37	498.2776184082031	NaN	0	498.2776184082031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KTNPTIGPAP_	ENSG00000196935|ENST00000355086|SRGAP1;nc|ENSG00000196935|Q7Z6B7-2|SRGAP1	27.047317107675042	0.41136583337917604	1				NaN	NaN	0	NaN	1875	3181	5052
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5059	19.509	NaN	476.69	30	0	104.67	0.033	+			25171	LLVVGEHT	8	23	434.2495403330268	NaN	0	434.2497253417969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LLVVGEHT_	ENSG00000188897|ENST00000696174|unknown	21.70233525837049	1.7418937515398478	1				NaN	NaN	0	NaN	1876	3181	5052
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5067	19.529	NaN	4981.3	30	0	682.69	0.214	+			2534	AQAESLRYK	9	66	533.2882867859557	1064.5620206387114	2	533.2880249023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AQAESLRYK_	ENSG00000149273|ENST00000531188|RPS3;ENST00000433853.1_1_3:183867695-183868220:+|nuORF;ENST00000487417.1_1_12:62415587-62415818:-|nuORF;nc|ENSG00000149273|P23396-2|RPS3;RPS3|p.L110I|1|0.35|ENSG00000149273|chr11:75402424-75402424|C/A|missense_variant	140.11223852658463	0.010427410095706195	1				NaN	NaN	0	NaN	1881	3184	5066
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5068	19.533	NaN	5271	30	0	2471.9	0.106	+			40616	SVAKTILKR	9	49	339.22548713372794	1014.6546320013838	3	339.2255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVAKTILKR_	ENSG00000114978|ENST00000396049|MOB1A;ENSG00000173542|ENST00000309395|MOB1B;ENST00000497054.5_1_2:74386211-74405801:-|nuORF;nc|ENSG00000173542|Q7L9L4-2|MOB1B	74.1650062923329	0.12277912660386392	1				NaN	NaN	0	NaN	1882	3184	5066
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5069	19.535	NaN	2705.2	30	0	258.84	0.106			+	-1	RCPARCGW	8	46	503.22925423343327	1004.4439555336666	2	503.2292785644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_RC(Carbamidomethyl (C))PARCGW_	REV__ENST00000510814.5_1_4:185350169-185395199:-|nuORF	25.450171626174864	0.7628259754767981	1				NaN	NaN	0	NaN	1883	3184	5066
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5070	19.537	NaN	4096.8	30	0	428.52	0.106	+			3680	ASYVASTKYQK	11	72	623.3273169345546	1244.640080935909	2	623.3275756835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASYVASTKYQK_	ENSG00000044115|ENST00000302763|CTNNA1;ENSG00000066032|ENST00000402739|CTNNA2;ENST00000522792.1_1_5:138268134-138269775:+|nuORF;nc|ENSG00000044115|P35221-2|CTNNA1;nc|ENSG00000044115|P35221-3|CTNNA1;nc|ENSG00000066032|P26232-2|CTNNA2;nc|ENSG00000066032|P26232-3|CTNNA2;nc|ENSG00000066032|P26232-4|CTNNA2;nc|ENSG00000066032|P26232-5|CTNNA2;nc|ENSG00000066032|P26232-6|CTNNA2	82.5048064154565	0.13149110632092975	1				NaN	NaN	0	NaN	1884	3184	5066
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5071	19.538	NaN	1635.9	30	0	233.08	0.106	+			8744	EEFLQMMK	8	50	528.2492833766719	NaN	0	527.7715454101562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EEFLQMMK_	ENSG00000163536|ENST00000446050|SERPINI1;SERPINI1|p.Y131Ifs*3|1|0.32|ENSG00000163536|chr3:167790505-167790506|-/A|frameshift_variant	30.503639358989545	1.7418937515398478	1				NaN	NaN	0	NaN	1885	3184	5066
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5072	19.54	NaN	2960.6	30	0	491.86	0.106			+	-1	TNLSTAICCV	10	52	569.7646727324089	1137.5147925316178	2	569.765869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Carbamidomethyl (C)	_TNLSTAIC(Carbamidomethyl (C))C(Carbamidomethyl (C))V_	REV__CNTRL|p.N1300Tfs*22|1|0.32|ENSG00000119397|chr9:121150412-121150412|C/-|frameshift_variant	47.657333605630114	0.47858658696240314	1				NaN	NaN	0	NaN	1886	3184	5066
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5073	19.542	NaN	4509.8	30	0	557.69	0.035	+			40617	SVAKTILKR	9	65	508.334654214537	1014.654755495874	2	508.33502197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVAKTILKR_	ENSG00000114978|ENST00000396049|MOB1A;ENSG00000173542|ENST00000309395|MOB1B;ENST00000497054.5_1_2:74386211-74405801:-|nuORF;nc|ENSG00000173542|Q7L9L4-2|MOB1B	147.73206827945663	0.0073977474511673896	1				NaN	NaN	0	NaN	1887	3184	5066
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5088	19.573	NaN	8715.8	30	0	4089.1	0.214	+			32150	QSPQGRVM	8	54	451.7292219937624	901.4438910543248	2	451.7290954589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QSPQGRVM_	ENSG00000169564|ENST00000303577|PCBP1	85.35947970620816	0.2915182781752196	1				NaN	NaN	0	NaN	1899	3187	5087
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5089	19.577	NaN	5931.2	30	0	1082.7	0.106			+	34380	RTRPPQRP	8	55	336.5342118982497	NaN	0	336.5341491699219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RTRPPQRP_	REV__ENST00000302754.5_1_19:12902350-12902593:+|nuORF	21.70233525837049	1.7418937515398478	1				NaN	NaN	0	NaN	1900	3187	5087
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5090	19.579	NaN	2843.7	30	0	415.72	0.106	+			40509	STYPAQNGQVK	11	47	596.8013338486479	1191.5881147640957	2	596.8012084960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STYPAQNGQVK_	ENSG00000081237|ENST00000442510|PTPRC;nc|ENSG00000081237|P08575-10|PTPRC;nc|ENSG00000081237|P08575-4|PTPRC;nc|ENSG00000081237|P08575-5|PTPRC;nc|ENSG00000081237|P08575-6|PTPRC;nc|ENSG00000081237|P08575-7|PTPRC;nc|ENSG00000081237|P08575-8|PTPRC;nc|ENSG00000081237|P08575-9|PTPRC;PTPRC|p.N1239Tfs*17|1|0.43|ENSG00000081237|chr1:198755972-198755972|A/-|frameshift_variant	54.722347961057174	0.3705654281804646	1				NaN	NaN	0	NaN	1901	3187	5087
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5091	19.581	NaN	1658.3	30	0	222.52	0.106	+			4192	ATFSSSHRY	9	58	528.2492833766719	NaN	0	528.2489013671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATFSSSHRY_	ENSG00000138674|ENST00000395310|SEC31A;ENST00000436790.6_1_4:83784452-83812260:-|nuORF;ENST00000506497.5_1_4:83799153-83812260:-|nuORF;ENST00000507867.5_1_4:83798919-83812260:-|nuORF;nc|ENSG00000138674|O94979-10|SEC31A;nc|ENSG00000138674|O94979-2|SEC31A;nc|ENSG00000138674|O94979-3|SEC31A;nc|ENSG00000138674|O94979-4|SEC31A;nc|ENSG00000138674|O94979-5|SEC31A;nc|ENSG00000138674|O94979-6|SEC31A;nc|ENSG00000138674|O94979-8|SEC31A;nc|ENSG00000138674|O94979-9|SEC31A;SEC31A|p.K616Nfs*18|1|0.26|ENSG00000138674|chr4:82856985-82856985|T/-|frameshift_variant;SEC31A|p.P1058Qfs*62|1|0.4|ENSG00000138674|chr4:82827487-82827487|G/-|frameshift_variant	47.95952297671804	0.22075498469600283	1				NaN	NaN	0	NaN	1902	3187	5087
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5092	19.582	NaN	1550.5	30	0	170.91	0.106	+			16707	HLAKCNTNTS	10	58	544.7641407983161	NaN	0	544.7645874023438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HLAKCNTNTS_	CNGA3|p.P135H|1|0.28|ENSG00000144191|chr2:98383396-98383396|C/A|missense_variant	39.252832667884924	0.37128895876774715	1				NaN	NaN	0	NaN	1903	3187	5087
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5093	19.584	NaN	1196.2	30	0	208.68	0.034	+			40984	SVGLPSRTK	9	41	472.77976022762596	943.5449675220519	2	472.779541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVGLPSRTK_	ENSG00000065526|ENST00000375759|SPEN	39.252832667884924	0.4290233611298554	1				NaN	NaN	0	NaN	1904	3187	5087
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5105	19.61	NaN	9838.1	30	0	2291.1	0.213	+			14663	GTIEKSKLITK	11	75	609.3768210779475	1216.739089222695	2	609.376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTIEKSKLITK_	ENSG00000144426|ENST00000683969|NBEAL1;NBEAL1|p.A1274Qfs*17|1|0.1|ENSG00000144426|chr2:203135766-203135766|A/-|frameshift_variant;NBEAL1|p.F1670Lfs*25|1|0.21|ENSG00000144426|chr2:203144843-203144843|T/-|frameshift_variant;NBEAL1|p.F2315Lfs*2|1|0.17|ENSG00000144426|chr2:203193900-203193900|T/-|frameshift_variant;NBEAL1|p.K2562Rfs*15|1|0.41|ENSG00000144426|chr2:203209306-203209306|A/-|frameshift_variant;NBEAL1|p.N2072Kfs*10|1|0.35|ENSG00000144426|chr2:203172825-203172826|-/A|frameshift_variant;NBEAL1|p.T1311Nfs*3|1|0.08|ENSG00000144426|chr2:203135875-203135876|-/A|frameshift_variant;nc|ENSG00000144426|Q6ZS30-1|NBEAL1;nc|ENSG00000144426|Q6ZS30|NBEAL1	163.46403022179925	4.564038370676518E-05	1				NaN	NaN	0	NaN	1913	3190	5104
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5106	19.613	NaN	3902.4	30	0	550.14	0.106				-1	MQDKNPYSFQP	11	66	706.8108970382991	1411.6072411433981	2	706.8115844726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))M(Oxidation (M))QDKNPYSFQP_	BRAF|p.S637P|1|0.09|ENSG00000157764|chr7:140749370-140749370|A/G|missense_variant	26.063383197487333	0.7164075632144343	1				NaN	NaN	0	NaN	1914	3190	5104
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5107	19.615	NaN	3733.2	30	0	1459	0.106	+			48731	VTVDGHLIRK	10	59	569.340251841677	1136.6659507501538	2	569.3407592773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTVDGHLIRK_	ENSG00000107521|ENST00000361490|HPS1;ENST00000467246.5_1_10:100191016-100205113:-|nuORF;ENST00000474873.5_1_10:100195027-100205113:-|nuORF;nc|ENSG00000289758|Q92902-2|HPS1;nc|ENSG00000289758|Q92902-3|HPS1	38.753607047826485	0.5606299674732264	1				NaN	NaN	0	NaN	1915	3190	5104
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5108	19.617	NaN	2240	30	0	242.72	0.106			+	30244	PSVEKKER	8	55	486.77859488762243	971.5426368420449	2	486.781005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PSVEKKER_	REV__ENST00000587366.1_1_18:55280911-55288994:-|nuORF	49.44154591367651	0.597725784090933	1				NaN	NaN	0	NaN	1916	3190	5104
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5109	19.619	NaN	1550.1	30	0	338.4	0.036	+			48590	VTQSDLYKK	9	49	541.2994124987221	1080.584272064244	2	541.2992553710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTQSDLYKK_	ENSG00000101150|ENST00000346249|TPD52L2;nc|ENSG00000101150|O43399-5|TPD52L2;nc|ENSG00000101150|O43399-7|TPD52L2	33.921630207806714	0.48623198279849766	1				NaN	NaN	0	NaN	1917	3190	5104
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5120	19.643	NaN	8435.7	30	0	2628.6	0.214	+			43231	TEVNKLQKG	9	61	339.52924561510633	1015.5659074455191	3	339.529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEVNKLQKG_	ENSG00000096872|ENST00000380062|IFT74;IFT74|p.K212Nfs*20|1|0.08|ENSG00000096872|chr9:27009064-27009064|A/-|frameshift_variant;nc|ENSG00000096872|Q96LB3-2|IFT74	49.44154591367651	0.3095138337212152	1				NaN	NaN	0	NaN	1925	3193	5119
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5121	19.646	NaN	3170.6	30	0	1960.3	0.106	+			38888	SSPASKTTL	9	37	446.2426484403818	890.4707439475636	2	446.2424621582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSPASKTTL_	ENSG00000162437|ENST00000294428|RAVER2;ENST00000418058.1_1_1:65270770-65280577:+|nuORF;nc|ENSG00000162437|Q9HCJ3-2|RAVER2	49.536043120802724	0.308405419312776	1				NaN	NaN	0	NaN	1926	3193	5119
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5122	19.648	NaN	1130.6	30	0	164.05	0.106			+	11467	FNLMRKLA	8	40	496.78974619393887	NaN	0	496.789794921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FNLMRKLA_	REV__ENSG00000092108|ENST00000458591|SCFD1;REV__SCFD1|p.N36Kfs*14|1|0.22|ENSG00000092108|chr14:30628249-30628250|-/A|frameshift_variant;REV__SCFD1|p.V202Cfs*43|1|0.35|ENSG00000092108|chr14:30643389-30643390|-/T|frameshift_variant	35.200714571348534	1.7418937515398478	1				NaN	NaN	0	NaN	1927	3193	5119
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5123	19.65	NaN	759	30	0	84.876	0.106	+			41163	SVKKPINKQ	9	38	347.885009765625	NaN	0	347.885009765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVKKPINKQ_	ENSG00000062650|ENST00000298767|WAPL;nc|ENSG00000062650|Q7Z5K2-2|WAPL;nc|ENSG00000062650|Q7Z5K2-3|WAPL	23.04248740728303	0.3589936788096251	1				NaN	NaN	0	NaN	1928	3193	5119
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5124	19.652	NaN	876.26	30	0	176.01	0.034			+	21595	KPIVCFVQ	8	37	467.266845703125	NaN	0	467.266845703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KPIVCFVQ_	REV__ENSG00000163354|ENST00000368424|DCST2;REV__nc|ENSG00000163354|Q5T1A1-2|DCST2	24.20275056022122	1.7418937515398478	1				NaN	NaN	0	NaN	1929	3193	5119
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5136	19.677	NaN	12087	30	0	1643.3	0.214	+			39140	SSVGSVITKK	10	75	503.30052058209503	1004.5864882309901	2	503.30023193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSVGSVITKK_	ENSG00000076554|ENST00000518937|TPD52;ENST00000517445.5_1_8:80962678-80964851:-|nuORF;ENST00000521354.5_1_8:80950353-81083761:-|nuORF;ENST00000522364.5_1_8:80963727-80992703:-|nuORF;nc|ENSG00000076554|P55327-2|TPD52;nc|ENSG00000076554|P55327-3|TPD52;nc|ENSG00000076554|P55327-5|TPD52;nc|ENSG00000076554|P55327-6|TPD52;nc|ENSG00000076554|P55327-7|TPD52;nc|ENSG00000076554|P55327|TPD52	89.02883481214508	0.13663399911061233	1				NaN	NaN	0	NaN	1938	3196	5135
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5137	19.681	NaN	2166.4	30	0	433.77	0.106			+	-1	GCIHRFLSN	9	50	552.2747573601173	1102.5349617870345	2	552.276123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GC(Carbamidomethyl (C))IHRFLSN_	REV__tr|U7T5S7|U7T5S7_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00069PE=4SV=1	47.657333605630114	0.33044192980041115	1				NaN	NaN	0	NaN	1939	3196	5135
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5138	19.683	NaN	1464.6	30	0	334.89	0.106	+			25581	LQGAANAL	8	40	379.2137086312004	756.4128643292008	2	379.2134704589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LQGAANAL_	ENSG00000106327|ENST00000223051|TFR2;ENST00000465294.5_1_7:100218482-100225153:-|nuORF;ENST00000476304.5_1_7:100218482-100231271:-|nuORF;nc|ENSG00000106327|Q9UP52-2|TFR2;nc|ENSG00000106327|Q9UP52-3|TFR2	35.200714571348534	0.6875396545722289	1				NaN	NaN	0	NaN	1940	3196	5135
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5139	19.685	NaN	2211.7	30	0	1105.7	0.106	+			328	AAPTAQKSL	9	38	443.7532269790504	885.4919010249008	2	443.7529602050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AAPTAQKSL_	ENSG00000158615|ENST00000367188|PPP1R15B	40.05817265558897	0.419577045485086	1				NaN	NaN	0	NaN	1941	3196	5135
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5140	19.686	NaN	1383.7	30	0	297.49	0.036			+	21493	KNKSLSIFR	9	38	546.831298828125	NaN	0	546.831298828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KNKSLSIFR_	REV__tr|U7T2Y3|U7T2Y3_FUSNUDhaGproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00503PE=4SV=1	37.81151784470057	0.28666463014928195	1				NaN	NaN	0	NaN	1942	3196	5135
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5150	19.708	NaN	4218.9	30	0	640.39	0.214	+			35462	SASSLHLTK	9	57	472.26382054940024	942.5130881656005	2	472.2635803222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SASSLHLTK_	ENSG00000181396|ENST00000313056|OGFOD3;nc|ENSG00000181396|Q6PK18-2|OGFOD3	85.86182877749512	0.07653218437724067	1				NaN	NaN	0	NaN	1949	3199	5149
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5151	19.712	NaN	3177.1	30	0	479.1	0.106	+			48144	VSVYNQNK	8	54	476.2474038203852	950.4802547075705	2	476.2481994628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSVYNQNK_	ESCO2|p.F86V|1|0.22|ENSG00000171320|chr8:27776564-27776564|T/G|missense_variant	71.29570347882199	0.39610197767395533	1				NaN	NaN	0	NaN	1950	3199	5149
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5152	19.714	NaN	1985.6	30	0	207.42	0.106	+			37017	SIQNQMQSK	9	56	532.2637749625579	1062.5129969919158	2	532.2639770507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SIQNQMQSK_	ENSG00000158985|ENST00000505065|CDC42SE2	96.66504779109242	0.04607440320619715	1				NaN	NaN	0	NaN	1951	3199	5149
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5153	19.716	NaN	1428.7	30	0	181.18	0.106	+			6851	CKLAQPLSK	9	51	494.2862988925592	986.5580448519185	2	494.2862854003906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_CKLAQPLSK_	L1PB1_dup5905|chr7:93807211-93809400:+|2.023350116566841|0.2056128638309657|3.3|382.0|45|2|sense	31.529811441608018	0.5085848003137583	1				NaN	NaN	0	NaN	1952	3199	5149
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5154	19.718	NaN	2339	30	0	271	0.106			+	20997	KKGKVQQAIT	10	59	550.8422017487544	1099.6698505643087	2	550.8423461914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KKGKVQQAIT_	REV__ENSG00000073969|ENST00000398238|NSF;REV__nc|ENSG00000073969|P46459-2|NSF	71.87747018426188	0.26198133118427214	1				NaN	NaN	0	NaN	1953	3199	5149
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5155	19.719	NaN	1628.8	30	0	184.47	0.106			+	11336	FLDRVEASKSV	11	48	625.8401259486201	NaN	0	625.8405151367188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FLDRVEASKSV_	REV__ENST00000553399.1_1_14:68282450-68282693:-|nuORF	27.047317107675042	0.44487757903053116	1				NaN	NaN	0	NaN	1954	3199	5149
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5156	19.721	NaN	1580.2	30	0	306.01	0.035	+			11054	FENLNTVAE	9	44	518.7509490556279	1035.4873451780556	2	518.7513427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FENLNTVAE_	ENSG00000153898|ENST00000370608|MCOLN2;nc|ENSG00000153898|Q8IZK6-2|MCOLN2	51.33545320467046	0.2872990594074956	1				NaN	NaN	0	NaN	1955	3199	5149
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5165	19.741	NaN	8539	30	0	1721.9	0.214	+			3111	ASGSFKLNK	9	73	476.26629902726626	950.5180451213325	2	476.266357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASGSFKLNK_	ENSG00000124575|ENST00000244534|H1-3;ENSG00000124610|ENST00000244573|H1-1;ENSG00000168298|ENST00000304218|H1-4;ENSG00000184357|ENST00000331442|H1-5;ENSG00000187837|ENST00000343677|H1-2	106.68306549817024	0.032382560583716295	1				NaN	NaN	0	NaN	1961	3202	5164
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5166	19.745	NaN	3393.1	30	0	789.26	0.106			+	12165	GALELLRRPA	10	55	548.3351153235295	1094.655677713859	2	548.3358154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GALELLRRPA_	REV__ENSG00000204480|ENST00000376101|PRAMEF19;REV__ENSG00000279804|ENST00000624297|PRAMEF18;REV__PRAMEF18|p.L41Tfs*8|1|0.33|ENSG00000279804|chr1:13225993-13225994|-/G|frameshift_variant	35.61828744233558	0.588957954432594	1				NaN	NaN	0	NaN	1962	3202	5164
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5167	19.747	NaN	1491.2	30	0	119.69	0.106				-1	 	0	47	321.70016252539784	641.3857721175957	2	321.7003173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	1963	3202	5164
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5168	19.748	NaN	1291.8	30	0	164.96	0.106	+			37029	SIQTAIAKK	9	53	480.2975615792435	958.580570225287	2	480.29718017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SIQTAIAKK_	ENSG00000205413|ENST00000379958|SAMD9	65.46538089061403	0.16805504838372562	1				NaN	NaN	0	NaN	1964	3202	5164
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5169	19.75	NaN	1362.7	30	0	175.39	0.106			+	32048	QRSVGLLKSI	10	47	550.842529296875	NaN	0	550.842529296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QRSVGLLKSI_	REV__tr|U7SUD8|U7SUD8_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01390PE=4SV=1	29.170058357718403	0.40439580130713204	1				NaN	NaN	0	NaN	1965	3202	5164
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5170	19.752	NaN	1606.2	30	0	299.62	0.106	+			37792	SLYSACSMQS	10	53	538.7231952580441	1075.4318375828882	2	539.224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLYSACSMQS_	ENSG00000106070|ENST00000401949|GRB10;nc|ENSG00000106070|Q13322-2|GRB10;nc|ENSG00000106070|Q13322-3|GRB10;nc|ENSG00000106070|Q13322-4|GRB10	30.317721548370564	0.6322445173429027	1				NaN	NaN	0	NaN	1966	3202	5164
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5171	19.754	NaN	1628.8	30	0	364.01	0.036	+			20702	KGQIMKILK	9	46	529.841796875	NaN	0	529.841796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KGQIMKILK_	ENST00000434009.5_1_6:111696256-111696382:-|nuORF;REV3L|p.T1059Lfs*43|1|0.19|ENSG00000009413|chr6:111375180-111375180|T/-|frameshift_variant	21.9598887501803	0.3626577482100488	1				NaN	NaN	0	NaN	1967	3202	5164
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5178	19.77	NaN	6962.1	30	0	1973.2	0.214	+			35390	SAQGNVYVK	9	57	483.2557037773424	964.4968546214848	2	483.25592041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAQGNVYVK_	ENSG00000131051|ENST00000253363|RBM39;ENST00000397254.2_1_X:43889279-43890164:+|nuORF;ENST00000429968.5_1_20:34292405-34322136:-|nuORF;ENST00000492779.5_1_20:34292405-34320086:-|nuORF;ENST00000496183.5_1_20:34292405-34295154:-|nuORF;nc|ENSG00000131051|Q14498-2|RBM39;nc|ENSG00000131051|Q14498-3|RBM39;NDUFS1-RBM39|1|fusion;NDUFS1-RBM39|2|fusion;NDUFS1-RBM39|3|fusion;NDUFS1-RBM39|4|fusion	126.24258497203832	0.01742065577488747	1				NaN	NaN	0	NaN	1971	3205	5177
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5179	19.774	NaN	2659.4	30	0	356.57	0.106	+			41789	SVSQKLMAK	9	57	496.2835067069181	990.5524604806362	2	496.2834167480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVSQKLMAK_	ENSG00000137200|ENST00000373451|CMTR1	72.87924865735499	0.12833875048249987	1				NaN	NaN	0	NaN	1972	3205	5177
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5180	19.776	NaN	1802.3	30	0	160.2	0.106	+			38657	SSINSRFAK	9	57	505.27461499978546	NaN	0	505.274658203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSINSRFAK_	ENSG00000171311|ENST00000370902|EXOSC1;ENST00000471049.5_1_10:99197505-99205308:-|nuORF;ENST00000472345.5_1_10:99197505-99205641:-|nuORF;ENST00000476234.5_1_10:99200926-99205742:-|nuORF	63.53385203322761	0.134247007536971	1				NaN	NaN	0	NaN	1973	3205	5177
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5181	19.778	NaN	3692.8	30	0	425.8	0.106	+			4411	ATIDSQHGIEK	11	72	599.8065408058179	1197.5985286784357	2	599.8072509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATIDSQHGIEK_	ENSG00000110002|ENST00000456829|VWA5A;nc|ENSG00000110002|O00534-2|VWA5A;nc|ENSG00000110002|O00534-3|VWA5A;nc|ENSG00000110002|O00534-4|VWA5A;VWA5A|p.D273Ifs*24|1|0.19|ENSG00000110002|chr11:124123014-124123014|A/-|frameshift_variant;VWA5A|p.D571Mfs*3|1|0.56|ENSG00000110002|chr11:124137094-124137094|A/-|frameshift_variant;VWA5A|p.G366Afs*38|1|0.21|ENSG00000110002|chr11:124123733-124123733|G/-|frameshift_variant	132.86201258240888	0.0010753258230121613	1				NaN	NaN	0	NaN	1974	3205	5177
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5182	19.779	NaN	2676.3	30	0	366.36	0.106			+	-1	CNPVYRPMGR	10	56	604.7878149747814	1207.5610770163628	2	604.7896728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_CNPVYRPM(Oxidation (M))GR_	REV__PCED1A|p.S414C|1|0.38|ENSG00000132635|chr20:2835587-2835587|T/A|missense_variant	34.172542307311794	0.6007644933930345	1				NaN	NaN	0	NaN	1975	3205	5177
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5183	19.781	NaN	1258.8	30	0	139.24	0.106			+	27754	MQTTVHALVC	10	46	551.771728515625	NaN	0	551.771728515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MQTTVHALVC_	REV__tr|U7T0H3|U7T0H3_FUSNUEthanolamineammonia-lyaselargesubunitOS=FusobacteriumnucleatumCTI-5OX=1316586GN=eutBPE=3SV=1	29.170058357718403	0.40439580130713204	1				NaN	NaN	0	NaN	1976	3205	5177
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5184	19.783	NaN	1138.7	30	0	208.2	0.035	+			10327	ETSNDLPKF	9	42	525.7588075856738	1049.5030622381475	2	525.7584228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ETSNDLPKF_	ENSG00000121864|ENST00000496856|ZNF639	39.252832667884924	0.4290233611298554	1				NaN	NaN	0	NaN	1977	3205	5177
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5194	19.806	NaN	9237.6	30	0	1215.4	0.214	+			13262	GISETRIEK	9	70	516.7877796889775	1031.5610064447549	2	516.7879028320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GISETRIEK_	ENSG00000079819|ENST00000337057|EPB41L2;ENSG00000082397|ENST00000341928|EPB41L3;ENSG00000159023|ENST00000343067|EPB41;ENST00000368126.2_1_6:131179278-131186801:-|nuORF;ENST00000452150.6_1_6:131179278-131188835:-|nuORF;nc|ENSG00000079819|O43491-2|EPB41L2;nc|ENSG00000079819|O43491-3|EPB41L2;nc|ENSG00000079819|O43491-4|EPB41L2;nc|ENSG00000082397|Q9Y2J2-2|EPB41L3;nc|ENSG00000082397|Q9Y2J2-4|EPB41L3;nc|ENSG00000159023|P11171-2|EPB41;nc|ENSG00000159023|P11171-3|EPB41;nc|ENSG00000159023|P11171-4|EPB41;nc|ENSG00000159023|P11171-5|EPB41;nc|ENSG00000159023|P11171-6|EPB41	123.20810148215591	0.019257656778428764	1				NaN	NaN	0	NaN	1984	3208	5193
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5195	19.81	NaN	1623.2	30	0	216.52	0.106			+	18451	ISEATLAIKHA	11	38	385.22392061419066	1152.649932442772	3	385.2239990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ISEATLAIKHA_	REV__tr|U7SKQ1|U7SKQ1_FUSNUMultidrug-effluxtransporterOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02104PE=4SV=1	26.063383197487333	0.7164075632144343	1				NaN	NaN	0	NaN	1985	3208	5193
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5196	19.812	NaN	1807.4	30	0	235.99	0.106	+			15420	GTYQDRLTK	9	55	541.2850175812521	1080.555482229304	2	541.2853393554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTYQDRLTK_	ENSG00000164758|ENST00000297347|MED30;ENST00000519879.1_1_8:118533115-118541135:+|nuORF;nc|ENSG00000164758|Q96HR3-2|MED30	77.53327743719008	0.1082147015697554	1				NaN	NaN	0	NaN	1986	3208	5193
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5197	19.814	NaN	1570.9	30	0	183.03	0.106	+			27435	MLGIYSHW	8	52	503.7434787675533	1005.4724046019066	2	503.743408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MLGIYSHW_	ATP1B3|p.K221Nfs*26|1|0.39|ENSG00000069849|chr3:141922052-141922052|A/-|frameshift_variant	35.200714571348534	0.6875396545722289	1				NaN	NaN	0	NaN	1987	3208	5193
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5198	19.816	NaN	4100.7	30	0	956.31	0.036			+	10076	ESIKVQDSL	9	51	340.18533838253666	1017.5341857478099	3	340.1851806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ESIKVQDSL_	REV__ENSG00000141504|ENST00000269298|SAT2;REV__ENST00000570850.5_1_17:7530037-7530996:-|nuORF;REV__ENST00000571074.5_1_17:7529767-7530880:-|nuORF;REV__ENST00000572224.1_1_17:7530636-7531149:-|nuORF;REV__ENST00000575826.5_1_17:7530037-7530880:-|nuORF	53.351449002276354	0.2690372970092375	1				NaN	NaN	0	NaN	1988	3208	5193
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5205	19.833	NaN	10822	30	0	1429.6	0.214	+			3035	ASFENVRAK	9	79	511.2748118333485	1020.535070733497	2	511.273681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASFENVRAK_	ENSG00000136238|ENST00000348035|RAC1;ENSG00000169750|ENST00000306897|RAC3;ENST00000488373.5_1_7:6415539-6442074:+|nuORF;nc|ENSG00000136238|P63000-2|RAC1	112.10723106719422	0.02684780151337622	1				NaN	NaN	0	NaN	1992	3211	5204
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5206	19.837	NaN	1896.3	30	0	265.7	0.106	+			40072	STNPFRPQK	9	56	537.7879799669959	1073.5614070007916	2	537.78857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STNPFRPQK_	ENSG00000174021|ENST00000370645|GNG5;nc|ENSG00000133136|A0A804HLA8|GNG5B	37.81151784470057	0.4459294069877048	1				NaN	NaN	0	NaN	1993	3211	5204
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5207	19.839	NaN	2754.7	30	0	383.37	0.106			+	10527	EWERIENKAQ	10	63	651.8253089209882	1301.6360649087762	2	651.8251342773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EWERIENKAQ_	REV__ENSG00000205302|ENST00000379516|SNX2;REV__ENST00000514030.1_1_5:122153007-122163181:+|nuORF;REV__nc|ENSG00000205302|O60749-2|SNX2	63.53385203322761	0.33370026130094593	1				NaN	NaN	0	NaN	1994	3211	5204
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5208	19.841	NaN	2209.7	30	0	283.04	0.035	+			5586	AVATKFVNK	9	57	489.29235172949996	976.5701505257999	2	489.29168701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVATKFVNK_	ENSG00000038382|ENST00000344204|TRIO;ENST00000508717.1_1_5:14498631-14508016:+|nuORF;nc|ENSG00000038382|O75962-2|TRIO;nc|ENSG00000038382|O75962-3|TRIO;nc|ENSG00000038382|O75962-4|TRIO	104.0567914643314	0.03506238181059741	1				NaN	NaN	0	NaN	1995	3211	5204
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5220	19.867	NaN	19233	30	0	2487	0.214	+			30339	PTSVEAKQK	9	79	494.2769080647105	986.539263196221	2	494.27685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PTSVEAKQK_	ENSG00000176771|ENST00000409261|NCKAP5	93.19546047674547	0.05585629608842056	1				NaN	NaN	0	NaN	2004	3214	5219
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5221	19.871	NaN	6696	30	0	1799	0.106	+			44392	TSLKSIMKK	9	61	518.3149828524504	1034.6154127717007	2	518.3152465820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TSLKSIMKK_	ENSG00000132854|ENST00000371153|KANK4;nc|ENSG00000132854|Q5T7N3-2|KANK4	63.42647028704847	0.1850514934184437	1				NaN	NaN	0	NaN	2005	3214	5219
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5222	19.873	NaN	8996.1	30	0	1061.2	0.106	+			2619	AQIENSAAVQK	11	70	579.8091690157404	1157.6037850982807	2	579.8095092773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AQIENSAAVQK_	ENSG00000117226|ENST00000370481|GBP3;ENSG00000117228|ENST00000370473|GBP1;ENST00000394662.2_1_1:89887573-89889825:+|nuORF;GBP1|p.K391Sfs*28|1|0.19|ENSG00000117228|chr1:89056212-89056212|T/-|frameshift_variant;GBP3|p.G430Afs*34|1|0.37|ENSG00000117226|chr1:89010977-89010977|C/-|frameshift_variant;nc|ENSG00000117226|Q9H0R5-4|GBP3	206.72814124674278	3.563786490912116E-09	1				NaN	NaN	0	NaN	2006	3214	5219
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5223	19.874	NaN	2760.3	30	0	604.9	0.106			+	18608	ISRVYPTI	8	58	474.78091369242804	947.5472744516561	2	474.78070068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ISRVYPTI_	REV__ENSG00000158286|ENST00000377939|RNF207	30.503639358989545	0.7238069182250283	1				NaN	NaN	0	NaN	2007	3214	5219
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5224	19.876	NaN	4018.7	30	0	364.24	0.106	+			34615	RVPVEKPVYK	10	64	405.580063255258	1213.718360365974	3	405.5800476074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RVPVEKPVYK_	ENSG00000184428|ENST00000329245|TOP1MT;nc|ENSG00000184428|Q969P6-2|TOP1MT	53.59686742100583	0.4240759338601513	1				NaN	NaN	0	NaN	2008	3214	5219
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5225	19.878	NaN	3846.2	30	0	590.08	0.106	+			5247	ATVDIVQKK	9	67	501.303135613937	1000.591718294674	2	501.30322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATVDIVQKK_	AP4B1|p.C320Afs*21|1|0.35|ENSG00000134262|chr1:113900060-113900060|A/-|frameshift_variant;ENSG00000134262|ENST00000369569|AP4B1;ENST00000489499.5_1_1:114442984-114447339:-|nuORF;nc|ENSG00000134262|Q9Y6B7-2|AP4B1	62.107414245175825	0.1960472003779324	1				NaN	NaN	0	NaN	2009	3214	5219
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5226	19.88	NaN	2088.6	30	0	282.5	0.037				-1	DMMCSSCQEA	10	47	568.6727287463472	NaN	0	568.6727905273438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Oxidation (M)	_DM(Oxidation (M))M(Oxidation (M))CSSCQEA_	ENSG00000108557|ENST00000353383|RAI1	9.705651100619752	0.4201028297492154	1				NaN	NaN	0	NaN	2010	3214	5219
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5238	19.906	NaN	5522.6	30	0	760.25	0.214	+			5313	ATVLTSVKK	9	71	473.8000016990689	945.5854504649378	2	473.7999572753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATVLTSVKK_	ENSG00000092201|ENST00000216297|SUPT16H;ENST00000537175.1_1_12:16553955-16554369:-|nuORF;SUPT16H|p.Y764Cfs*2|1|0.36|ENSG00000092201|chr14:21359493-21359494|AT/-|frameshift_variant	87.69643885390035	0.07135982304947239	1				NaN	NaN	0	NaN	2019	3217	5237
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5239	19.909	NaN	1816.1	30	0	578.65	0.106	+			37514	SLLKLKAEK	9	51	515.3374633789062	NaN	0	515.3374633789062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLLKLKAEK_	ENSG00000107957|ENST00000369774|SH3PXD2A;nc|ENSG00000107957|Q5TCZ1-2|SH3PXD2A;nc|ENSG00000107957|Q5TCZ1-3|SH3PXD2A;SH3PXD2A|p.Q1067Vfs*5|1|0.08|ENSG00000107957|chr10:103602018-103602019|TG/-|frameshift_variant;SH3PXD2A|p.V1096Cfs*22|1|0.36|ENSG00000107957|chr10:103601932-103601932|C/-|frameshift_variant	49.536043120802724	0.20989033510253738	1				NaN	NaN	0	NaN	2020	3217	5237
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5240	19.911	NaN	3442.7	30	0	748.89	0.106	+			48431	VTKIAKSVIA	10	54	343.8936478932008	NaN	0	343.8936767578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTKIAKSVIA_	ENSG00000274070|ENST00000616305|CASTOR2	30.568863376406313	0.39980281766270914	1				NaN	NaN	0	NaN	2021	3217	5237
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5241	19.913	NaN	2048.9	30	0	154.65	0.106			+	30688	QCRCQYNHSEK	11	55	698.2974734884672	1394.5803940437343	2	698.2974853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QCRCQYNHSEK_	REV__ENSG00000062370|ENST00000354340|ZNF112;REV__nc|ENSG00000062370|Q9UJU3|ZNF112	28.081489160057373	0.6952392775027776	1				NaN	NaN	0	NaN	2022	3217	5237
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5242	19.915	NaN	2420.7	30	0	622.58	0.106			+	44205	TRGRQHEQ	8	36	506.25630280247077	NaN	0	506.2567443847656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TRGRQHEQ_	REV__ENSG00000115204|ENST00000380044|MPV17;REV__MPV17|p.G95Afs*7|1|0.1|ENSG00000115204|chr2:27312585-27312585|C/-|frameshift_variant	34.172542307311794	1.7418937515398478	1				NaN	NaN	0	NaN	2023	3217	5237
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5243	19.917	NaN	2304.5	30	0	317.8	0.106	+			24696	LHEAQRTFCD	10	60	610.2807888983195	1218.547024863439	2	610.28125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LHEAQRTFCD_	DNHD1|p.R2658W|1|0.17|ENSG00000179532|chr11:6557267-6557267|C/T|missense_variant;DNHD1|p.S3597Rfs*6|1|0.1|ENSG00000179532|chr11:6565718-6565719|-/AG|frameshift_variant;DNHD1|p.T4259Pfs*33|2|0.33|ENSG00000179532|chr11:6568772-6568772|C/-|frameshift_variant;ENSG00000179532|ENST00000254579|DNHD1;ENST00000534210.6_1_11:6559916-6579528:+|nuORF	45.97224482568171	0.49411383603842696	1				NaN	NaN	0	NaN	2024	3217	5237
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5244	19.919	NaN	826.93	30	0	118.96	0.033	+			67	AAASPVHLK	9	33	447.26385498046875	NaN	0	447.26385498046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AAASPVHLK_	BCL9|p.P1111Lfs*3|1|0.39|ENSG00000116128|chr1:147624005-147624005|G/-|frameshift_variant;BCL9|p.P971Hfs*11|2|0.26|ENSG00000116128|chr1:147622275-147622275|C/-|frameshift_variant;BCL9|p.Q1139Rfs*138|1|0.37|ENSG00000116128|chr1:147624089-147624089|C/-|frameshift_variant;BCL9|p.Q1162Rfs*115|2|0.28|ENSG00000116128|chr1:147624156-147624156|G/-|frameshift_variant;ENSG00000116128|ENST00000234739|BCL9	20.94693142431847	0.3660861156085067	1				NaN	NaN	0	NaN	2025	3217	5237
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5255	19.944	NaN	4956	30	0	854.32	0.214				-1	ASMKKVKSL	9	47	336.5342118982497	NaN	0	336.53411865234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ASM(Oxidation (M))KKVKSL_	ENST00000369426.9_1_1:119575536-119588262:-|nuORF	32.81241826257853	0.3119040447479903	1				NaN	NaN	0	NaN	2033	3220	5254
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5256	19.947	NaN	3202.8	30	0	519.26	0.106	+			31546	QLLPVDAIR	9	56	512.8111753642629	1023.6077977953258	2	512.8111572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QLLPVDAIR_	ENSG00000105926|ENST00000222644|PALS2;MPP6|p.E139Nfs*5|1|0.39|ENSG00000105926|chr7:24649753-24649753|G/-|frameshift_variant	44.116797842482775	0.37197099687881774	1				NaN	NaN	0	NaN	2034	3220	5254
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5257	19.949	NaN	3338.7	30	0	574.06	0.106	+			26230	LSSLVKQHI	9	41	342.2092732575177	1023.605990372753	3	342.5437927246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSSLVKQHI_	ABCA5|p.F1078Lfs*6|2|0.34|ENSG00000154265|chr17:69264816-69264816|A/-|frameshift_variant;ABCA5|p.L1530Wfs*5|1|0.25|ENSG00000154265|chr17:69250568-69250568|A/-|frameshift_variant;ENSG00000154265|ENST00000392676|ABCA5;nc|ENSG00000154265|Q8WWZ7-2|ABCA5	19.359975847455235	0.6112419832031293	1				NaN	NaN	0	NaN	2035	3220	5254
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5258	19.951	NaN	1974.5	30	0	595.11	0.106	+			1967	AIYGTRKFK	9	58	542.3192348995291	1082.623916865858	2	542.3201904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AIYGTRKFK_	ENSG00000197629|ENST00000361050|MPEG1	58.2462437865262	0.22823408064396822	1				NaN	NaN	0	NaN	2036	3220	5254
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5259	19.953	NaN	1148.8	30	0	101.03	0.034	+			39324	STAVAVLKK	9	47	458.79546410739243	915.5763752815849	2	458.7945861816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STAVAVLKK_	ARHGEF10|p.E997Gfs*16|1|0.43|ENSG00000104728|chr8:1928644-1928644|A/-|frameshift_variant;ARHGEF10|p.P976Rfs*8|1|0.14|ENSG00000104728|chr8:1928577-1928577|C/-|frameshift_variant;ENSG00000104728|ENST00000349830|ARHGEF10;ENST00000523711.5_1_8:1824717-1874701:+|nuORF;nc|ENSG00000104728|O15013-4|ARHGEF10;nc|ENSG00000104728|O15013-6|ARHGEF10;nc|ENSG00000104728|O15013-7|ARHGEF10;nc|ENSG00000104728|O15013|ARHGEF10	64.20726635412375	0.17854274437659667	1				NaN	NaN	0	NaN	2037	3220	5254
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5268	19.974	NaN	1580.3	30	0	115.21	0.214			+	-1	QSLIVTMICP	10	57	589.3033673878263	1176.5921818424524	2	589.3036499023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_QSLIVTM(Oxidation (M))IC(Carbamidomethyl (C))P_	REV__ENSG00000011677|ENST00000370314|GABRA3;REV__ENSG00000022355|ENST00000393943|GABRA1;REV__ENSG00000109158|ENST00000264318|GABRA4;REV__ENSG00000145863|ENST00000274545|GABRA6;REV__ENSG00000151834|ENST00000381620|GABRA2;REV__ENSG00000186297|ENST00000335625|GABRA5;REV__GABRA1|p.P402Tfs*9|1|0.29|ENSG00000022355|chr5:161897251-161897261|CAAGCCCGAAA/-|frameshift_variant;REV__GABRA5|p.A356Pfs*15|1|0.24|ENSG00000186297|chr15:26943397-26943397|A/-|frameshift_variant;REV__nc|ENSG00000151834|P47869-2|GABRA2	44.377184641726394	0.5088115166961078	1				NaN	NaN	0	NaN	2043	3223	5267
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5269	19.978	NaN	1478.8	30	0	348.65	0.106	+			13325	GKLTNVPA	8	38	400.23734201888766	798.4601311045753	2	400.23724365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GKLTNVPA_	ENSG00000068489|ENST00000262293|PRR11;PRR11|p.D222Mfs*6|1|0.37|ENSG00000068489|chr17:59194768-59194768|A/-|frameshift_variant	49.44154591367651	0.597725784090933	1				NaN	NaN	0	NaN	2044	3223	5267
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5270	19.98	NaN	3828.2	30	0	723.4	0.106	+			48783	VTYNGVDNNK	10	59	562.2722369597973	1122.5299209863945	2	562.2738037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTYNGVDNNK_	ENSG00000122545|ENST00000350320|SEPTIN7;ENST00000425198.1_1_7:35872473-35938044:+|nuORF;ENST00000469999.1_1_7:152065296-152065533:+|nuORF;ENST00000492940.1_1_7:35930257-35938044:+|nuORF;nc|ENSG00000122545|Q16181-2|SEPTIN7	65.15724298150197	0.31893571707528906	1				NaN	NaN	0	NaN	2045	3223	5267
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5271	19.982	NaN	2224.8	30	0	190.03	0.106	+			12694	GEKKAYVRL	9	46	532.3173127694198	1062.6200726056395	2	532.3173217773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEKKAYVRL_	ENSG00000198242|ENST00000422514|RPL23A;ENST00000471152.1_2_3:161146917-161147007:-|nuORF	33.921630207806714	0.48623198279849766	1				NaN	NaN	0	NaN	2046	3223	5267
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5272	19.984	NaN	2136.8	30	0	304.09	0.106			+	-1	QGDVTKEIVCM	11	56	648.3017057799756	1294.588858626751	2	648.3016967773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C),Oxidation (M)	_QGDVTKEIVC(Carbamidomethyl (C))M(Oxidation (M))_	REV__ENSG00000042781|ENST00000307340|USH2A;REV__nc|ENSG00000042781|O75445-2|USH2A;REV__nc|ENSG00000042781|O75445-3|USH2A;REV__USH2A|p.E5096Gfs*82|1|0.44|ENSG00000042781|chr1:215634469-215634470|-/C|frameshift_variant;REV__USH2A|p.F1618Lfs*17|1|0.36|ENSG00000042781|chr1:216089044-216089044|A/-|frameshift_variant;REV__USH2A|p.R551Ffs*46|1|0.11|ENSG00000042781|chr1:216292364-216292365|-/ATCACACTAGAACAAAA|frameshift_variant;REV__USH2A|p.T3753Lfs*31|1|0.37|ENSG00000042781|chr1:215758727-215758727|T/-|frameshift_variant;REV__USH2A|p.V1147Gfs*56|1|0.38|ENSG00000042781|chr1:216199998-216199999|-/C|frameshift_variant;REV__USH2A|p.W2964Gfs*10|1|0.21|ENSG00000042781|chr1:215845989-215845989|A/-|frameshift_variant	26.063383197487333	0.7164075632144343	1				NaN	NaN	0	NaN	2047	3223	5267
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5273	19.985	NaN	1763.8	30	0	863.1	0.106			+	43512	TGSPARIALL	10	34	333.5377197265625	NaN	0	333.5377197265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TGSPARIALL_	REV__ENSG00000205250|ENST00000379378|E2F4;REV__ENST00000567007.5_1_16:67226831-67232023:+|nuORF	23.04248740728303	0.42010282974921537	1				NaN	NaN	0	NaN	2048	3223	5267
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5274	19.987	NaN	833.73	30	0	83.153	0.035			+	32444	QVIQTKGPK	9	38	499.8040771484375	NaN	0	499.8040771484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QVIQTKGPK_	REV__DENND6A|p.T245K|1|0.07|ENSG00000174839|chr3:57659146-57659146|G/T|missense_variant	37.15910966729921	0.2899585034171616	1				NaN	NaN	0	NaN	2049	3223	5267
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5279	20.002	NaN	4576.2	30	0	543.58	0.214			+	34769	RYHQEHRQ	8	65	577.2842552134879	1152.5539574937757	2	577.2857055664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RYHQEHRQ_	REV__ENST00000370951.5_1_1:70671397-70687435:+|nuORF;REV__ENST00000395136.6_2_1:70687096-70687432:+|nuORF;REV__ENST00000463877.1_1_1:70671397-70687435:+|nuORF;REV__ENST00000475204.5_1_1:70687068-70687435:+|nuORF	52.936696900407355	0.5717071646657654	1				NaN	NaN	0	NaN	2051	3226	5278
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5280	20.005	NaN	1512.2	30	0	309.01	0.106	+			24375	LFSGCVSPAV	10	43	490.2475986489773	978.4806443647547	2	490.2471618652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LFSGCVSPAV_	ENST00000403096.7_1_2:3653453-3653594:+|nuORF	37.15910966729921	0.575322462179216	1				NaN	NaN	0	NaN	2052	3226	5278
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5281	20.007	NaN	952.43	30	0	147.98	0.106			+	-1	LSRMYDKV	8	32	514.2660522460938	NaN	0	514.2660522460938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_LSRM(Oxidation (M))YDKV_	REV__ENSG00000180347|ENST00000615280|ITPRID1;REV__nc|ENSG00000180347|Q6ZRS4-2|ITPRID1;REV__nc|ENSG00000180347|Q6ZRS4-3|ITPRID1;REV__nc|ENSG00000180347|Q6ZRS4-4|ITPRID1	35.61828744233558	1.7418937515398478	1				NaN	NaN	0	NaN	2053	3226	5278
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5282	20.009	NaN	1509.9	30	0	236.57	0.106			+	-1	WALRGSMGRV	10	40	574.8036802305523	NaN	0	574.80322265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_WALRGSM(Oxidation (M))GRV_	REV__ENSG00000170471|ENST00000262879|RALGAPB;REV__nc|ENSG00000170471|Q86X10-2|RALGAPB;REV__nc|ENSG00000170471|Q86X10-3|RALGAPB;REV__RALGAPB|p.D1147*|1|0.24|ENSG00000170471|chr20:38558354-38558355|-/T|frameshift_variant	29.170058357718403	0.40439580130713204	1				NaN	NaN	0	NaN	2054	3226	5278
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5283	20.011	NaN	1834	30	0	165.39	0.106	+			8448	EARLVQGSIL	10	51	543.3209199919959	NaN	0	543.3200073242188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EARLVQGSIL_	ENSG00000132646|ENST00000379143|PCNA	31.529811441608018	0.39664753963064203	1				NaN	NaN	0	NaN	2055	3226	5278
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5284	20.013	NaN	1598.5	30	0	173.2	0.035	+			50226	WNYLKGIL	8	52	503.7876835492033	NaN	0	503.788330078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_WNYLKGIL_	ENSG00000168522|ENST00000302279|FNTA;ENST00000530657.1_1_11:85906626-85907241:+|nuORF;nc|ENSG00000168522|P49354-2|FNTA	44.116797842482775	1.7418937515398478	1				NaN	NaN	0	NaN	2056	3226	5278
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5295	20.038	NaN	3635.3	30	0	648.68	0.214	+			34567	RVLSSIEQK	9	66	530.3117652155307	1058.6089774978614	2	530.312255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVLSSIEQK_	ENSG00000175793|ENST00000339276|SFN;nc|ENSG00000175793|P31947-2|SFN	109.43880257439609	0.029570636687953285	1				NaN	NaN	0	NaN	2064	3229	5294
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5296	20.042	NaN	2194	30	0	338.94	0.106	+			49026	VVGTNIVKK	9	50	479.3081905064188	956.6018280796376	2	479.30816650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVGTNIVKK_	ENSG00000142207|ENST00000382751|URB1	67.49366992349736	0.1516260258713357	1				NaN	NaN	0	NaN	2065	3229	5294
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5297	20.044	NaN	2409.6	30	0	339.73	0.106	+			23521	LAHSGSDL	8	57	400.20084646078084	798.3871399883617	2	400.2008972167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LAHSGSDL_	ENSG00000198420|ENST00000479870|TCAF1;ENST00000392900.3_1_7:143551228-143582358:-|nuORF;ENST00000414990.2_3_7:143295168-143301929:+|nuORF;nc|ENSG00000198420|Q9Y4C2-2|TCAF1	55.50420428727701	0.5462892107279674	1				NaN	NaN	0	NaN	2066	3229	5294
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5298	20.046	NaN	1261.4	30	0	327.56	0.106			+	2347	AMTSRTKE	8	35	462.2343410109698	NaN	0	462.2342224121094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AMTSRTKE_	REV__ENST00000576058.2_1_16:13552215-13552527:+|nuORF	66.42927471994793	1.7418937515398478	1				NaN	NaN	0	NaN	2067	3229	5294
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5299	20.048	NaN	1102.9	30	0	239.51	0.036			+	26901	LYACIMVGTQ	10	30	549.7675170898438	NaN	0	549.7675170898438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LYACIMVGTQ_	REV__PTEN|p.R130Q|1|0.72|ENSG00000171862|chr10:87933148-87933148|G/A|missense_variant	19.996771675451527	0.4201028297492154	1				NaN	NaN	0	NaN	2068	3229	5294
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5311	20.073	NaN	1628.9	30	0	260.98	0.214	+			42575	TASRVFVAV	9	51	475.2770051275343	948.5394573218687	2	475.27703857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TASRVFVAV_	ABCC4|p.L883Wfs*7|2|0.22|ENSG00000125257|chr13:95083178-95083178|A/-|frameshift_variant;ABCC4|p.T775Rfs*21|1|0.09|ENSG00000125257|chr13:95161322-95161323|-/AGTATGTCTT|frameshift_variant;ENSG00000125257|ENST00000645237|ABCC4;nc|ENSG00000125257|O15439-2|ABCC4;nc|ENSG00000125257|O15439-3|ABCC4;nc|ENSG00000125257|O15439-4|ABCC4	42.396135135203025	0.392153681582562	1				NaN	NaN	0	NaN	2077	3232	5310
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5312	20.077	NaN	1673.4	30	0	267.81	0.106				-1	CLFPPRLL	8	55	508.29046140100945	1014.5663698688189	2	508.2870788574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_C(Carbamidomethyl (C))LFPPRLL_	POLR3E|p.G595Afs*51|1|0.33|ENSG00000058600|chr16:22326189-22326189|C/-|frameshift_variant	21.70233525837049	0.7917639344264583	1				NaN	NaN	0	NaN	2078	3232	5310
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5313	20.079	NaN	4305.7	30	0	933.61	0.106			+	25085	LLMSFFPAL	9	49	346.8610377677033	1037.56128390331	3	346.8611145019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LLMSFFPAL_	REV__ENST00000566288.1_1_15:42041665-42041710:+|nuORF	35.61828744233558	0.47037581924408073	1				NaN	NaN	0	NaN	2079	3232	5310
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5314	20.08	NaN	2744.3	30	0	851.54	0.106			+	-1	VYLLFGRCFCC	11	34	711.8219259180092	NaN	0	711.8216552734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))VYLLFGRC(Carbamidomethyl (C))FCC_	REV__ENST00000460291.1_1_3:11383675-11389548:+|nuORF	25.57405402267927	0.45144328854727944	1				NaN	NaN	0	NaN	2080	3232	5310
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5315	20.082	NaN	1685.9	30	0	298.23	0.106			+	27583	MPKHNPFFT	9	54	559.7747551964002	1117.5349574596003	2	559.7755126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MPKHNPFFT_	REV__ENSG00000185666|ENST00000358763|SYN3	37.15910966729921	0.4535818937225704	1				NaN	NaN	0	NaN	2081	3232	5310
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5316	20.084	NaN	1282.3	30	0	288.87	0.034	+			13797	GQLSVHTPK	9	51	483.77166570185966	965.5287784705193	2	483.7717590332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GQLSVHTPK_	ENSG00000114861|ENST00000649528|FOXP1;nc|ENSG00000285708|Q9H334-3|FOXP1;nc|ENSG00000285708|Q9H334-4|FOXP1;nc|ENSG00000285708|Q9H334-6|FOXP1;nc|ENSG00000285708|Q9H334-7|FOXP1;nc|ENSG00000285708|Q9H334-8|FOXP1	53.59686742100583	0.26699147868981316	1				NaN	NaN	0	NaN	2082	3232	5310
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5325	20.106	NaN	8224.8	30	0	1275.4	0.214	+			2597	AQGNVYHLK	9	74	515.2774396435284	1028.5403263538567	2	515.2774047851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AQGNVYHLK_	ENSG00000143013|ENST00000370544|LMO4	141.52041321563706	0.009766778904176347	1				NaN	NaN	0	NaN	2088	3235	5324
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5326	20.109	NaN	19512	30	0	7104.8	0.106				-1	SVCVLVLPMG	10	49	358.8610525848897	1073.5613283548691	3	358.86114501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SVC(Carbamidomethyl (C))VLVLPMG_	nc|ENSG00000196266|Q5JRS4|OR10J3	22.579656572578934	0.6954366826851017	1				NaN	NaN	0	NaN	2089	3235	5324
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5327	20.111	NaN	6474.6	30	0	1525.7	0.106	+			6018	AVMDVVKKQK	10	74	573.3384952841	1144.6624376349998	2	573.3392944335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVMDVVKKQK_	ENSG00000092201|ENST00000216297|SUPT16H;SUPT16H|p.K393Sfs*29|2|0.2|ENSG00000092201|chr14:21364882-21364882|T/-|frameshift_variant;SUPT16H|p.S365Mfs*24|1|0.04|ENSG00000092201|chr14:21365096-21365097|-/A|frameshift_variant;SUPT16H|p.Y764Cfs*2|1|0.36|ENSG00000092201|chr14:21359493-21359494|AT/-|frameshift_variant	120.8684288430529	0.026103207050128037	1				NaN	NaN	0	NaN	2090	3235	5324
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5328	20.113	NaN	3861.7	30	0	381.73	0.106	+			41716	SVSEVMKESK	10	70	562.2863369087721	1122.5581208843441	2	562.2874145507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVSEVMKESK_	ENSG00000132305|ENST00000410111|IMMT;ENST00000474969.5_1_2:86385703-86422514:-|nuORF;ENST00000486633.1_1_2:86400704-86422514:-|nuORF;nc|ENSG00000132305|Q16891-2|IMMT;nc|ENSG00000132305|Q16891-3|IMMT;nc|ENSG00000132305|Q16891-4|IMMT	186.41076107051632	0.0005942356675692456	1				NaN	NaN	0	NaN	2091	3235	5324
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5329	20.115	NaN	3283.5	30	0	876.5	0.106	+			26334	LSWLTSVPL	9	47	339.1974359544304	1014.5704784634911	3	339.1973571777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSWLTSVPL_	ENST00000357052.7_1_19:41302655-41302697:+|nuORF	34.172542307311794	0.4838870758800184	1				NaN	NaN	0	NaN	2092	3235	5324
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5330	20.117	NaN	2321.6	30	0	293.05	0.106	+			8635	EDHNGSGQGPP	11	56	547.728025480028	1093.441498026856	2	548.3011474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EDHNGSGQGPP_	ENST00000392811.6_1_7:150974307-150974490:-|nuORF	22.579656572578934	0.7529490144093228	1				NaN	NaN	0	NaN	2093	3235	5324
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5331	20.118	NaN	6145.8	30	0	1322.2	0.036	+			27734	MQNMSIHTK	9	70	545.2622180511177	1088.5098831690352	2	545.2643432617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MQNMSIHTK_	CON__H-INV:HIT000292931;CON__P05787;CON__REFSEQ:XP_092267;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	109.43880257439609	0.029570636687953285	1				NaN	NaN	0	NaN	2094	3235	5324
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5340	20.138	NaN	3020.3	30	0	797.29	0.214			+	2043	AKRIDICPN	9	55	343.8541221323072	NaN	0	343.8541564941406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AKRIDICPN_	REV__ENSG00000179630|ENST00000325686|LACC1	32.81241826257853	0.3119040447479903	1				NaN	NaN	0	NaN	2100	3238	5339
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5341	20.142	NaN	2205.9	30	0	245.76	0.106	+			35567	SAYAFSHQR	9	54	533.7574889252089	NaN	0	533.75732421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAYAFSHQR_	ENSG00000081923|ENST00000648908|ATP8B1	61.76455937419982	0.141793055474112	1				NaN	NaN	0	NaN	2101	3238	5339
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5342	20.144	NaN	3039	30	0	1214.6	0.106			+	536	ADATAPISYKS	11	38	375.1933633877975	NaN	0	375.1932373046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ADATAPISYKS_	REV__tr|U7SNI7|U7SNI7_FUSNUPeptidylprolylisomeraseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01728PE=4SV=1	17.468008924990375	0.456735970842152	1				NaN	NaN	0	NaN	2102	3238	5339
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5343	20.146	NaN	2533.9	30	0	454.84	0.106				-1	MQRVMLNLR	9	63	601.8275196759963	1201.6404864187925	2	601.827392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))MQRVMLNLR_	ENST00000446498.1_1_1:26781359-26781389:-|nuORF	55.50420428727701	0.2510918378945873	1				NaN	NaN	0	NaN	2103	3238	5339
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5344	20.148	NaN	2262.9	30	0	734.73	0.106	+			49019	VVGPVGCGK	9	43	436.7363619342168	871.4581709352336	2	436.7362976074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_VVGPVGC(Carbamidomethyl (C))GK_	ABCC3|p.A658D|1|0.1|ENSG00000108846|chr17:50669175-50669175|C/A|missense_variant;ABCC3|p.L968Afs*31|1|0.33|ENSG00000108846|chr17:50675920-50675921|-/G|frameshift_variant;ENSG00000108846|ENST00000285238|ABCC3;ENST00000502426.5_1_17:48736553-48755440:+|nuORF;nc|ENSG00000108846|O15438-2|ABCC3;nc|ENSG00000108846|O15438-4|ABCC3	47.91560031466742	0.327412564698279	1				NaN	NaN	0	NaN	2104	3238	5339
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5345	20.149	NaN	2815.5	30	0	468.81	0.106	+			12842	GENVWRCCQ	9	59	547.728025480028	1093.441498026856	2	547.728271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GENVWRCCQ_	ENSG00000141750|ENST00000333461|STAC2;nc|ENSG00000141750|Q6ZMT1-2|STAC2	55.50420428727701	0.2510918378945873	1				NaN	NaN	0	NaN	2105	3238	5339
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5346	20.151	NaN	2633.5	30	0	257.96	0.034	+			39791	STLAVTSQK	9	53	467.76376136514807	933.5129697970962	2	467.7638244628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STLAVTSQK_	ENSG00000132549|ENST00000357162|VPS13B;nc|ENSG00000132549|Q7Z7G8-3|VPS13B;nc|ENSG00000132549|Q7Z7G8-6|VPS13B;nc|ENSG00000132549|Q7Z7G8|VPS13B;VPS13B|p.I1913*|1|0.3|ENSG00000132549|chr8:99642246-99642246|A/-|frameshift_variant;VPS13B|p.M3156Ifs*2|1|0.07|ENSG00000132549|chr8:99832427-99832428|-/TA|frameshift_variant;VPS13B|p.S3988Lfs*4|1|0.55|ENSG00000132549|chr8:99875552-99875553|-/C|frameshift_variant;VPS13B|p.S3988Pfs*25|1|0.11|ENSG00000132549|chr8:99875553-99875553|C/-|frameshift_variant	115.49404669440601	0.023927554121326553	1				NaN	NaN	0	NaN	2106	3238	5339
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5355	20.173	NaN	6526.4	30	0	881.36	0.214	+			40073	STNPFRPQK	9	68	537.7879799669959	1073.5614070007916	2	537.7882690429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STNPFRPQK_	ENSG00000174021|ENST00000370645|GNG5;nc|ENSG00000133136|A0A804HLA8|GNG5B	82.24051045832904	0.08786059719216216	1				NaN	NaN	0	NaN	2112	3241	5354
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5356	20.176	NaN	5671.3	30	0	379.08	0.106			+	19493	KATGGARLLSG	11	73	515.8039248183574	1029.5932967035146	2	515.803955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KATGGARLLSG_	REV__ENST00000356387.6_1_7:102092453-102092639:+|nuORF	77.31757898189308	0.17473537675624723	1				NaN	NaN	0	NaN	2113	3241	5354
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5357	20.178	NaN	3943.5	30	0	793.98	0.106	+			178	AALAKAIEK	9	53	457.7869399058906	913.5593268785813	2	457.7867431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AALAKAIEK_	ENSG00000108946|ENST00000589228|PRKAR1A;nc|ENSG00000108946|P10644-2|PRKAR1A	107.00750918261382	0.032051501805654005	1				NaN	NaN	0	NaN	2114	3241	5354
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5358	20.18	NaN	2550.5	30	0	498.43	0.106				-1	MAARVGTETM	10	48	541.7517023906993	1081.4888518481985	2	541.7523803710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_MAARVGTETM(Oxidation (M))_	PFAS|p.V817M|1|0.51|ENSG00000178921|chr17:8265456-8265456|G/A|missense_variant	30.317721548370564	0.6322445173429027	1				NaN	NaN	0	NaN	2115	3241	5354
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5359	20.182	NaN	1333.5	30	0	268.67	0.106	+			2075	ALATISDHK	9	40	478.2636320134559	954.5127110937118	2	478.2640075683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ALATISDHK_	ENST00000610009.5_1_4:4650831-4651211:+|nuORF	42.396135135203025	0.392153681582562	1				NaN	NaN	0	NaN	2116	3241	5354
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5360	20.184	NaN	1860.4	30	0	244.88	0.106	+			15108	GTQPGPLLKK	10	54	519.8189018208164	1037.6232507084328	2	519.8191528320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTQPGPLLKK_	ENSG00000123243|ENST00000397146|ITIH5;ENST00000476417.5_1_10:7615057-7659255:-|nuORF;ENST00000492668.5_1_10:7611547-7618533:-|nuORF;ITIH5|p.L690*|1|0.49|ENSG00000123243|chr10:7569749-7569749|G/-|frameshift_variant;nc|ENSG00000123243|Q86UX2-2|ITIH5;nc|ENSG00000123243|Q86UX2-3|ITIH5;nc|ENSG00000123243|Q86UX2-4|ITIH5;nc|ENSG00000123243|Q86UX2|ITIH5	30.568863376406313	0.6301935916953115	1				NaN	NaN	0	NaN	2117	3241	5354
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5361	20.185	NaN	945.05	30	0	198.63	0.033	+			21586	KPIDKKAP	8	28	448.781582737695	895.54861254219	2	448.781494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KPIDKKAP_	ENSG00000092820|ENST00000367075|EZR;ENSG00000137710|ENST00000645495|RDX;ENSG00000147065|ENST00000360270|MSN;MSN|p.P297Afs*2|1|0.34|ENSG00000147065|chrX:65735356-65735357|-/A|frameshift_variant;nc|ENSG00000137710|P35241-4|RDX;nc|ENSG00000137710|P35241-5|RDX	14.664097394203935	0.7913966407026132	1				NaN	NaN	0	NaN	2118	3241	5354
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5368	20.202	NaN	916.8	30	0	131.8	0.141	+			43555	THQPVAVL	8	38	432.7503976741107	NaN	0	432.750244140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_THQPVAVL_	ENSG00000131050|ENST00000354932|BPIFA2	60.29395666154354	1.7418937515398478	1				NaN	NaN	0	NaN	2122	3244	5367
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5374	20.219	NaN	1992.9	30	0	310.62	0.214	+			48081	VSSVLETKK	9	55	495.7944834811556	989.5744140291113	2	495.7944641113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSSVLETKK_	tr|U7SZW9|U7SZW9_FUSNUOrotidine5'-phosphatedecarboxylaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=pyrFPE=3SV=1	35.61828744233558	0.47037581924408073	1				NaN	NaN	0	NaN	2125	3247	5373
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5375	20.222	NaN	3834.4	30	0	1612.6	0.106	+			34965	SAAKTFITK	9	42	322.8588119509142	965.5546064529426	3	322.8586730957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAAKTFITK_	ENSG00000146247|ENST00000275034|PHIP;ENST00000479165.1_1_6:79650412-79665440:-|nuORF	44.377184641726394	0.36891676396732553	1				NaN	NaN	0	NaN	2126	3247	5373
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5376	20.224	NaN	960.97	30	0	106.73	0.034			+	11720	FSCGHGSPPA	10	46	480.203857421875	NaN	0	480.203857421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FSCGHGSPPA_	REV__RYR2|p.K1745Nfs*25|1|0.49|ENSG00000198626|chr1:237614358-237614358|A/-|frameshift_variant	34.172542307311794	0.38797011891751465	1				NaN	NaN	0	NaN	2127	3247	5373
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5384	20.244	NaN	3974.4	30	0	763.19	0.214	+			35277	SALTDKAIVKK	11	68	587.3638731187467	1172.7131933042933	2	587.3642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SALTDKAIVKK_	ENSG00000176485|ENST00000415826|PLAAT3;ENST00000394613.3_1_11:63342419-63381578:-|nuORF	139.3066351666995	0.000563693985352425	1				NaN	NaN	0	NaN	2132	3250	5383
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5385	20.248	NaN	5907.4	30	0	1195.3	0.106	+			45955	VASPRMDPK	9	60	500.7655731582624	999.5165933833248	2	500.7657470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VASPRMDPK_	ENST00000492406.5_1_3:112280909-112281080:+|nuORF	74.25504064058377	0.12238981753128622	1				NaN	NaN	0	NaN	2133	3250	5383
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5386	20.25	NaN	8731.2	30	0	4837.1	0.106				-1	GNKNVVLCP	9	48	334.17942210336696	999.5164369103009	3	334.17974853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_GNKNVVLC(Carbamidomethyl (C))P_	ENST00000532980.3_1_11:59055317-59056556:-|nuORF	31.529811441608018	0.5085848003137583	1				NaN	NaN	0	NaN	2134	3250	5383
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5387	20.251	NaN	1937.6	30	0	184.37	0.106	+			49337	VVSGLKQALG	10	50	486.2978534329936	970.5811539327872	2	486.2978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVSGLKQALG_	ENST00000553865.1_1_14:99968556-99969378:+|nuORF;nc|ENSG00000090061|O75909-4|CCNK	28.081489160057373	0.6505064946289502	1				NaN	NaN	0	NaN	2135	3250	5383
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5388	20.253	NaN	1482.3	30	0	303.72	0.106			+	23067	KVTSPNRLK	9	46	521.8218303094283	1041.6291076856564	2	522.3233032226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KVTSPNRLK_	REV__ENST00000381918.3_1_5:36686318-36686381:+|nuORF	50.033510581677724	0.3025703251535696	1				NaN	NaN	0	NaN	2136	3250	5383
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5389	20.255	NaN	1278.1	30	0	232.63	0.106			+	51138	YNLFKVRQ	8	49	534.3052368164062	NaN	0	534.3052368164062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YNLFKVRQ_	REV__ENSG00000196218|ENST00000359596|RYR1;REV__nc|ENSG00000196218|P21817-2|RYR1;REV__nc|ENSG00000196218|P21817-3|RYR1	26.79610172149135	1.7418937515398478	1				NaN	NaN	0	NaN	2137	3250	5383
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5390	20.257	NaN	3039.9	30	0	621.93	0.032			+	47371	VPGTRTCP	8	51	415.71291980582885	829.4112866784577	2	415.7127990722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VPGTRTCP_	REV__OSR2|p.Y58Ifs*79|1|0.45|ENSG00000164920|chr8:98949120-98949120|G/-|frameshift_variant	52.29916861842294	0.578018602984656	1				NaN	NaN	0	NaN	2138	3250	5383
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5401	20.282	NaN	22096	30	0	2480	0.214	+			973	AEKAYHEQL	9	85	544.771734949765	1087.52891696633	2	544.7723999023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEKAYHEQL_	ENSG00000075886|ENST00000321253|TUBA3D;ENSG00000123416|ENST00000336023|TUBA1B;ENSG00000127824|ENST00000248437|TUBA4A;ENSG00000152086|ENST00000312988|TUBA3E;ENSG00000167552|ENST00000301071|TUBA1A;ENSG00000167553|ENST00000301072|TUBA1C;ENSG00000183785|ENST00000330423|TUBA8;ENSG00000198033|ENST00000400113|TUBA3C;ENST00000437364.2_1_1:47358067-47358181:+|nuORF;ENST00000530835.1_1_11:90015825-90016947:+|nuORF;nc|ENSG00000123416|P68363-2|TUBA1B;nc|ENSG00000127824|P68366-2|TUBA4A;nc|ENSG00000167552|Q71U36-2|TUBA1A;nc|ENSG00000183785|Q9NY65-2|TUBA8;nc|ENSG00000198033|P0DPH7-2|TUBA3C;TUBA1A|p.I276V|1|0.05|ENSG00000167552|chr12:49185540-49185540|T/C|missense_variant;TUBA3C|p.T361Rfs*18|1|0.17|ENSG00000198033|chr13:19174136-19174136|G/-|frameshift_variant;TUBA3D|p.G366Efs*13|1|0.17|ENSG00000075886|chr2:131482588-131482588|G/-|frameshift_variant;TUBA3D|p.V328Pfs*54|1|0.45|ENSG00000075886|chr2:131480665-131480666|-/CCCAAAGA|frameshift_variant	142.36107225718385	0.009372392051035914	1				NaN	NaN	0	NaN	2146	3253	5400
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5402	20.285	NaN	8482.6	30	0	4136.6	0.106	+			48984	VVGKPIEVQK	10	58	366.2289744677481	1095.6650940034444	3	366.22882080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVGKPIEVQK_	ENSG00000166391|ENST00000198801|MOGAT2;nc|ENSG00000166391|Q3SYC2-2|MOGAT2	32.75053402867276	0.6123771875927935	1				NaN	NaN	0	NaN	2147	3253	5400
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5403	20.287	NaN	3676.6	30	0	757.46	0.106	+			15072	GTPPQKLPLG	10	40	336.53410455626056	1006.5804842689818	3	336.5342102050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTPPQKLPLG_	nc|ENSG00000162105|Q9UPX8-2|SHANK2	16.473147378115264	0.7327422906225664	1				NaN	NaN	0	NaN	2148	3253	5400
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5404	20.289	NaN	1759.7	30	0	505.06	0.106				-1	 	0	38	343.7147401909831	685.4149274487662	2	343.7145690917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	2149	3253	5400
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5405	20.291	NaN	1009.8	30	0	104.76	0.106			+	47988	VSPRATPAM	9	38	465.2471618652344	NaN	0	465.2471618652344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSPRATPAM_	REV__MEGF11|p.G421Afs*41|1|0.41|ENSG00000157890|chr15:65957572-65957572|C/-|frameshift_variant	25.57405402267927	0.3484490411150625	1				NaN	NaN	0	NaN	2150	3253	5400
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5406	20.293	NaN	804.74	30	0	116.4	0.106				-1	ELACNMKIS	9	27	512.7453369518599	NaN	0	512.745361328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_ELACNM(Oxidation (M))KIS_	ENSG00000011454|ENST00000373647|RABGAP1	9.705651100619752	0.40413237678333463	1				NaN	NaN	0	NaN	2151	3253	5400
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5407	20.295	NaN	1175.9	30	0	144.57	0.035	+			38582	SSFSSPHMK	9	44	504.234331452421	1006.454109971642	2	504.7356872558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSFSSPHMK_	ENSG00000162664|ENST00000340281|ZNF326	51.19269402634007	0.2889735674168909	1				NaN	NaN	0	NaN	2152	3253	5400
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5415	20.314	NaN	3816	30	0	376.26	0.212				-1	AVYLSTCKDSK	11	82	636.3184576876092	1270.6223624420184	2	636.3184204101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_AVYLSTC(Carbamidomethyl (C))KDSK_	ENSG00000231925|ENST00000434618|TAPBP;nc|ENSG00000231925|O15533-3|TAPBP;nc|ENSG00000231925|O15533-4|TAPBP	50.79123845855914	0.4102859592092987	1				NaN	NaN	0	NaN	2157	3256	5414
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5416	20.318	NaN	3019.4	30	0	435.74	0.106	+			36630	SGGPLIVHK	9	58	454.2715570415492	906.5285611498985	2	454.2713623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SGGPLIVHK_	ENSG00000243649|ENST00000425368|CFB;ENST00000482312.1_1_6:31918808-31919804:+|nuORF	101.60071028292904	0.0375685401170269	1				NaN	NaN	0	NaN	2158	3256	5414
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5417	20.32	NaN	1862.4	30	0	318.67	0.106	+			14752	GTKGPSNVFK	10	55	517.7855362537261	1033.5565195742522	2	517.785400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTKGPSNVFK_	ENSG00000039123|ENST00000230640|MTREX	44.639436926238396	0.506394993251866	1				NaN	NaN	0	NaN	2159	3256	5414
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5418	20.322	NaN	2956.7	30	0	504.12	0.106	+			14096	GSLGGQINK	9	53	437.24296347280017	872.4713740124004	2	437.24285888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GSLGGQINK_	ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC;PRKDC|p.D2437Wfs*3|1|0.11|ENSG00000253729|chr8:47840161-47840162|-/CA|frameshift_variant;PRKDC|p.E1557Sfs*16|1|0.16|ENSG00000253729|chr8:47886051-47886051|C/-|frameshift_variant;PRKDC|p.G1227Vfs*50|2|0.31|ENSG00000253729|chr8:47893306-47893306|C/-|frameshift_variant;PRKDC|p.K3681Nfs*6|1|0.32|ENSG00000253729|chr8:47785174-47785177|TTCT/-|frameshift_variant;PRKDC|p.M3670*|1|0.5|ENSG00000253729|chr8:47785212-47785212|T/-|frameshift_variant;PRKDC|p.M3846Cfs*12|1|0.13|ENSG00000253729|chr8:47779047-47779047|T/-|frameshift_variant;PRKDC|p.M4020Cfs*2|1|0.31|ENSG00000253729|chr8:47776968-47776968|T/-|frameshift_variant;PRKDC|p.N3605Kfs*3|1|0.22|ENSG00000253729|chr8:47788993-47788994|-/T|frameshift_variant;PRKDC|p.N4037Ifs*15|1|0.17|ENSG00000253729|chr8:47776916-47776916|T/-|frameshift_variant;PRKDC|p.R2704Gfs*13|2|0.34|ENSG00000253729|chr8:47834238-47834238|T/-|frameshift_variant;PRKDC|p.S3402Ifs*16|1|0.04|ENSG00000253729|chr8:47799302-47799303|-/AAACCGTGAGTTAGAGGAGGTAA|frameshift_variant;PRKDC|p.S4099Qfs*6|1|0.25|ENSG00000253729|chr8:47774265-47774265|A/-|frameshift_variant;PRKDC|p.T3268Pfs*7|1|0.5|ENSG00000253729|chr8:47803426-47803426|T/-|frameshift_variant;PRKDC|p.W3401Cfs*4|1|0.01|ENSG00000253729|chr8:47799304-47799305|-/AATGAATA|frameshift_variant	118.74307786436346	0.02196067127630568	1				NaN	NaN	0	NaN	2160	3256	5414
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5419	20.323	NaN	2655	30	0	359.77	0.106				-1	QVWQMELV	8	55	524.7621142384279	1047.5096755436557	2	524.7625732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_QVWQM(Oxidation (M))ELV_	nc|ENSG00000162521|Q09028-3|RBBP4	55.50420428727701	0.5462892107279674	1				NaN	NaN	0	NaN	2161	3256	5414
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5420	20.325	NaN	891.56	30	0	123.43	0.106			+	16743	HLPLAAPFGA	10	46	497.27777341688096	NaN	0	497.277587890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HLPLAAPFGA_	REV__ENST00000253506.9_1_18:77170886-77171015:+|nuORF	26.79610172149135	0.4121907004225123	1				NaN	NaN	0	NaN	2162	3256	5414
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5421	20.327	NaN	740.68	30	0	104.13	0.035			+	-1	RSPGNTDSM	9	34	490.7066382766678	NaN	0	490.70635986328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_RSPGNTDSM(Oxidation (M))_	REV__ENST00000252797.6_1_16:30567229-30569136:-|nuORF	14.864876125193954	0.3866709117995958	1				NaN	NaN	0	NaN	2163	3256	5414
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5430	20.349	NaN	6104.5	30	0	1416.2	0.214	+			14320	GSYSKAFAR	9	68	493.75619321390775	985.4978334946155	2	493.75628662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSYSKAFAR_	ENSG00000005175|ENST00000005386|RPAP3;nc|ENSG00000005175|Q9H6T3-2|RPAP3;nc|ENSG00000005175|Q9H6T3-3|RPAP3	142.36107225718385	0.009372392051035914	1				NaN	NaN	0	NaN	2169	3259	5429
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5431	20.352	NaN	2565.3	30	0	554.52	0.106	+			15404	GTYGLDSVKKK	11	63	598.3379838896827	1194.6614148461654	2	598.3382568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTYGLDSVKKK_	ENSG00000087338|ENST00000282570|GMCL1	57.148748479083515	0.34890646465650643	1				NaN	NaN	0	NaN	2170	3259	5429
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5432	20.354	NaN	1879.1	30	0	406.27	0.106			+	-1	GSAFTSLMKK	10	37	362.52549618824395	NaN	0	362.5257568359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_GSAFTSLM(Oxidation (M))KK_	REV__tr|U7SM82|U7SM82_FUSNUShort-chainfattyacidstransporterOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01859PE=4SV=1	28.081489160057373	0.40797012399963245	1				NaN	NaN	0	NaN	2171	3259	5429
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5433	20.356	NaN	1122.7	30	0	175.28	0.106				-1	QCDVCGRIF	9	40	549.2464034125668	NaN	0	549.24609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_QCDVC(Carbamidomethyl (C))GRIF_	ENSG00000197608|ENST00000594440|ZNF841;nc|ENSG00000197608|Q6ZN19-2|ZNF841;nc|ENSG00000197608|Q6ZN19|ZNF841	35.61828744233558	0.29773779453147337	1				NaN	NaN	0	NaN	2172	3259	5429
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5434	20.358	NaN	1730.2	30	0	477.37	0.106			+	49895	VYTSRGQGPI	10	43	539.2885633853372	1076.5625738374742	2	539.28857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VYTSRGQGPI_	REV__EIF4G1|p.P1229Qfs*2|1|0.18|ENSG00000114867|chr3:184327606-184327606|C/-|frameshift_variant;REV__EIF4G1|p.T436Hfs*40|1|0.21|ENSG00000114867|chr3:184321883-184321884|-/C|frameshift_variant;REV__ENSG00000114867|ENST00000346169|EIF4G1;REV__nc|ENSG00000114867|Q04637-3|EIF4G1;REV__nc|ENSG00000114867|Q04637-4|EIF4G1;REV__nc|ENSG00000114867|Q04637-8|EIF4G1;REV__nc|ENSG00000114867|Q04637-9|EIF4G1	32.81241826257853	0.6118718159329168	1				NaN	NaN	0	NaN	2173	3259	5429
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5435	20.36	NaN	1550.5	30	0	322.65	0.106	+			37966	SPHGGALVM	9	46	442.71809992409703	NaN	0	442.7176208496094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_SPHGGALVM(Oxidation (M))_	ENSG00000164880|ENST00000404767|INTS1	50.0245360154114	0.20652386741182333	1				NaN	NaN	0	NaN	2174	3259	5429
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5436	20.361	NaN	1525.1	30	0	121.07	0.042				-1	WTYPMRREMQE	11	56	771.8427124023438	NaN	0	771.8427124023438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_WTYPMRREM(Oxidation (M))QE_	ENSG00000198252|ENST00000354586|STYX;STYX|p.F99Sfs*3|1|0.29|ENSG00000198252|chr14:52756599-52756599|T/-|frameshift_variant;STYX|p.M101Yfs*3|1|0.18|ENSG00000198252|chr14:52756598-52756599|-/T|frameshift_variant	21.68575002086885	0.456735970842152	1				NaN	NaN	0	NaN	2175	3259	5429
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5447	20.385	NaN	3776.6	30	0	1861.1	0.214	+			31017	QETHLKQQL	9	52	562.8070263764962	NaN	0	562.8071899414062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QETHLKQQL_	ENSG00000084652|ENST00000373610|TXLNA	76.7741389293348	0.08243745921263976	1				NaN	NaN	0	NaN	2183	3262	5446
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5448	20.389	NaN	4025.6	30	0	493.75	0.106	+			5236	ATVAGVHVK	9	49	441.2636937669647	880.5128346007294	2	441.263916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATVAGVHVK_	ENSG00000232838|ENST00000432901|PET117	98.62937762414208	0.04060045538121712	1				NaN	NaN	0	NaN	2184	3262	5446
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5449	20.391	NaN	2665.8	30	0	364.46	0.106	+			48727	VTVADHIQK	9	55	505.78471812455496	1009.5548833159099	2	505.7854309082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTVADHIQK_	ENSG00000181789|ENST00000314797|COPG1	109.47833844074708	0.029530294723441826	1				NaN	NaN	0	NaN	2185	3262	5446
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5450	20.393	NaN	2479.3	30	0	337.58	0.035	+			4577	ATLESIQRK	9	62	523.3035713932751	1044.59258985335	2	523.3042602539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATLESIQRK_	ENSG00000138640|ENST00000264344|FAM13A;ENST00000508360.5_1_4:89653076-89671014:-|nuORF;ENST00000511573.5_1_4:89649686-89680064:-|nuORF;nc|ENSG00000138640|O94988-1|FAM13A;nc|ENSG00000138640|O94988-3|FAM13A;nc|ENSG00000138640|O94988-5|FAM13A;nc|ENSG00000138640|O94988-6|FAM13A	67.49366992349736	0.1516260258713357	1				NaN	NaN	0	NaN	2186	3262	5446
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5460	20.415	NaN	2190	30	0	569.86	0.214			+	47421	VPQSKSVP	8	56	421.24272261563425	NaN	0	421.24273681640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VPQSKSVP_	REV__ENSG00000147601|ENST00000276603|TERF1;REV__ENST00000518961.1_1_8:73944214-73958369:+|nuORF;REV__ENST00000583350.1_1_18:14377547-14378720:-|nuORF;REV__nc|ENSG00000147601|P54274-2|TERF1	40.5726180659479	1.7418937515398478	1				NaN	NaN	0	NaN	2193	3265	5459
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5461	20.418	NaN	3695.7	30	0	1540.5	0.106	+			215	AALRPLVKPK	10	51	364.91317538255964	1091.717696747879	3	364.9130554199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AALRPLVKPK_	ENSG00000144713|ENST00000429711|RPL32;ENST00000452606.2_1_3:12880846-12881736:-|nuORF	36.446750945000026	0.5818864909973037	1				NaN	NaN	0	NaN	2194	3265	5459
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5462	20.42	NaN	2881	30	0	270.65	0.036	+			44128	TQATIYVHK	9	63	530.7930287837722	1059.5715046343444	2	531.2939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TQATIYVHK_	ENSG00000090686|ENST00000308271|USP48;nc|ENSG00000090686|Q86UV5-2|USP48;nc|ENSG00000090686|Q86UV5-5|USP48;nc|ENSG00000090686|Q86UV5-8|USP48;USP48|p.L982Ffs*9|1|0.08|ENSG00000090686|chr1:21690037-21690038|-/GG|frameshift_variant	65.46538089061403	0.16805504838372562	1				NaN	NaN	0	NaN	2195	3265	5459
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5470	20.438	NaN	7420.6	30	0	1352.1	0.214	+			5191	ATTLPIRNK	9	70	507.3087409401049	1012.6029289470098	2	507.3083801269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATTLPIRNK_	ANKRD17|p.K886Sfs*4|1|0.39|ENSG00000132466|chr4:73139959-73139959|T/-|frameshift_variant;ANKRD17|p.L2249Yfs*84|1|0.34|ENSG00000132466|chr4:73090884-73090884|G/-|frameshift_variant;ENSG00000132466|ENST00000358602|ANKRD17;ENST00000514252.1_1_4:73978989-74017230:-|nuORF;nc|ENSG00000132466|O75179-2|ANKRD17;nc|ENSG00000132466|O75179-3|ANKRD17;nc|ENSG00000132466|O75179-4|ANKRD17;nc|ENSG00000132466|O75179-6|ANKRD17;nc|ENSG00000132466|O75179-7|ANKRD17	96.0336014099291	0.047854655524928534	1				NaN	NaN	0	NaN	2200	3268	5469
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5471	20.442	NaN	1682.1	30	0	295.87	0.106	+			13798	GQLSVHTPK	9	53	483.77166570185966	965.5287784705193	2	483.7715759277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GQLSVHTPK_	ENSG00000114861|ENST00000649528|FOXP1;nc|ENSG00000285708|Q9H334-3|FOXP1;nc|ENSG00000285708|Q9H334-4|FOXP1;nc|ENSG00000285708|Q9H334-6|FOXP1;nc|ENSG00000285708|Q9H334-7|FOXP1;nc|ENSG00000285708|Q9H334-8|FOXP1	53.59686742100583	0.26699147868981316	1				NaN	NaN	0	NaN	2201	3268	5469
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5472	20.444	NaN	2412.3	30	0	633.02	0.106	+			5782	AVGTLQEAK	9	41	458.75848267044347	915.502412407687	2	458.7585144042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVGTLQEAK_	ENSG00000168453|ENST00000381418|HR;nc|ENSG00000168453|O43593-2|HR	93.5975768576971	0.05472259948179787	1				NaN	NaN	0	NaN	2202	3268	5469
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5473	20.446	NaN	6056.4	30	0	1906.2	0.106	+			5187	ATTLKNRPL	9	43	338.5414623222478	1012.6025575669435	3	338.5411682128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATTLKNRPL_	ENSG00000169129|ENST00000304129|AFAP1L2;ENST00000491814.1_1_10:116056685-116061337:-|nuORF;nc|ENSG00000169129|Q8N4X5-2|AFAP1L2;nc|ENSG00000169129|Q8N4X5-3|AFAP1L2;nc|ENSG00000169129|Q8N4X5-4|AFAP1L2	31.529811441608018	0.5085848003137583	1				NaN	NaN	0	NaN	2203	3268	5469
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5474	20.447	NaN	1304.2	30	0	548.59	0.106			+	-1	LIKYLSGLM	9	28	527.3065691666842	NaN	0	527.3062133789062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_LIKYLSGLM(Oxidation (M))_	REV__ENSG00000185231|ENST00000327606|MC2R	17.364965105453717	0.37820932774828947	1				NaN	NaN	0	NaN	2204	3268	5469
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5475	20.449	NaN	1060.6	30	0	98.341	0.034			+	46015	VAVLMLLGL	9	44	464.79986572265625	NaN	0	464.79986572265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VAVLMLLGL_	REV__ENSG00000127366|ENST00000247883|TAS2R5	29.841539824830324	0.32690339240668626	1				NaN	NaN	0	NaN	2205	3268	5469
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5481	20.464	NaN	2483.6	30	0	242.51	0.214	+			43613	TINGHNAEV	9	49	477.73461500520233	953.4546770772047	2	477.7351989746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TINGHNAEV_	ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;ENST00000495810.1_1_7:26235422-26236427:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1	60.11826168202944	0.21262886028301267	1				NaN	NaN	0	NaN	2208	3271	5480
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5482	20.468	NaN	3917.6	30	0	2679.8	0.106			+	45882	VAPAYKND	8	36	439.2242935438606	876.4340341545212	2	439.2239685058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VAPAYKND_	REV__ENSG00000119771|ENST00000486442|KLHL29;REV__ENST00000471654.1_1_2:23914526-23929531:+|nuORF	47.91560031466742	0.6071945918984287	1				NaN	NaN	0	NaN	2209	3271	5480
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5483	20.47	NaN	2734.7	30	0	518.71	0.106			+	-1	LRMTGSSALC	10	64	548.7595015382257	1095.5044501432512	2	548.760498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))LRM(Oxidation (M))TGSSALC_	REV__ENST00000458477.6_1_12:120687689-120687875:-|nuORF	23.52269567125451	0.6877354443478558	1				NaN	NaN	0	NaN	2210	3271	5480
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5484	20.471	NaN	2351.4	30	0	569.72	0.106			+	13879	GRAHNELVRLP	11	51	631.3572554478553	NaN	0	631.3571166992188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GRAHNELVRLP_	REV__ENSG00000138674|ENST00000395310|SEC31A;REV__ENST00000436790.6_1_4:83784452-83812260:-|nuORF;REV__nc|ENSG00000138674|O94979-10|SEC31A;REV__nc|ENSG00000138674|O94979-2|SEC31A;REV__nc|ENSG00000138674|O94979-3|SEC31A;REV__nc|ENSG00000138674|O94979-4|SEC31A;REV__nc|ENSG00000138674|O94979-5|SEC31A;REV__nc|ENSG00000138674|O94979-6|SEC31A;REV__nc|ENSG00000138674|O94979-8|SEC31A;REV__nc|ENSG00000138674|O94979-9|SEC31A;REV__SEC31A|p.K616Nfs*18|1|0.26|ENSG00000138674|chr4:82856985-82856985|T/-|frameshift_variant;REV__SEC31A|p.P1058Qfs*62|1|0.4|ENSG00000138674|chr4:82827487-82827487|G/-|frameshift_variant	29.170058357718403	0.43541742044178583	1				NaN	NaN	0	NaN	2211	3271	5480
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5485	20.473	NaN	1669.8	30	0	292.72	0.106	+			2122	ALHVLSSRL	9	39	332.53799293579516	994.5921494075856	3	332.8722229003906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ALHVLSSRL_	ENSG00000144554|ENST00000675286|FANCD2;FANCD2|p.I1249Nfs*2|1|0.48|ENSG00000144554|chr3:10090346-10090347|-/A|frameshift_variant;nc|ENSG00000144554|Q9BXW9-1|FANCD2;nc|ENSG00000144554|Q9BXW9-3|FANCD2	29.14955571784316	0.5308295550522326	1				NaN	NaN	0	NaN	2212	3271	5480
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5486	20.475	NaN	2260.9	30	0	222.09	0.106	+			18791	ITQYPHAVGK	10	50	557.3059288685527	1112.5973048039052	2	557.3079223632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ITQYPHAVGK_	ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656-2|DDOST;nc|ENSG00000244038|P39656-3|DDOST;nc|ENSG00000244038|P39656|DDOST	68.84614121027924	0.2867470276772903	1				NaN	NaN	0	NaN	2213	3271	5480
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5487	20.477	NaN	1258.6	30	0	116.53	0.036	+			11441	FLYLMFLK	8	53	545.802001953125	NaN	0	545.802001953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_FLYLM(Oxidation (M))FLK_	ENST00000467238.1_1_7:127631037-127637644:+|nuORF	46.76643321282427	1.7418937515398478	1				NaN	NaN	0	NaN	2214	3271	5480
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5495	20.495	NaN	1783.3	30	0	280.96	0.214			+	9635	ELRNKAGPGS	10	56	514.7780441267458	1027.5415353202916	2	514.7781982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ELRNKAGPGS_	REV__tr|U7T3J3|U7T3J3_FUSNUAutotransporterdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00684PE=4SV=1	61.691277971877994	0.35045824941635534	1				NaN	NaN	0	NaN	2219	3274	5494
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5496	20.499	NaN	1064.1	30	0	165.44	0.106			+	24430	LGATVGSLH	9	47	427.73995732633375	853.4653617194675	2	427.7401123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LGATVGSLH_	REV__ENST00000465181.1_1_3:38175644-38175893:-|nuORF	45.9519527083369	0.35044536499095585	1				NaN	NaN	0	NaN	2220	3274	5494
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5497	20.501	NaN	1416.2	30	0	252.82	0.106				-1	KGIKKWMH	8	37	522.2962646484375	NaN	0	522.2962646484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_KGIKKWM(Oxidation (M))H_	ENSG00000146242|ENST00000369750|TPBG;TPBG|p.R378H|1|0.29|ENSG00000146242|chr6:82366094-82366094|G/A|missense_variant	25.450171626174864	1.7418937515398478	1				NaN	NaN	0	NaN	2221	3274	5494
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5498	20.502	NaN	1216.9	30	0	206.8	0.106	+			37184	SIYQITFMNS	10	31	602.289696095439	1202.564839257678	2	602.791748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SIYQITFMNS_	tr|U7T5E1|U7T5E1_FUSNU16SrRNA(cytosine(967)-C(5))-methyltransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00032PE=3SV=1	13.45404412870281	0.7480832915596971	1				NaN	NaN	0	NaN	2222	3274	5494
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5499	20.504	NaN	1654.7	30	0	599.11	0.106	+			47827	VSKSDIKS	8	29	432.24530646601164	862.4760599988233	2	432.24481201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSKSDIKS_	ENSG00000151093|ENST00000280701|OXSM;nc|ENSG00000151093|Q9NWU1-2|OXSM;OXSM|p.F179Lfs*45|2|0.27|ENSG00000151093|chr3:25791552-25791552|T/-|frameshift_variant;OXSM|p.V180Cfs*3|1|0.29|ENSG00000151093|chr3:25791551-25791552|-/T|frameshift_variant	26.69291269510374	0.7532304684939817	1				NaN	NaN	0	NaN	2223	3274	5494
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5500	20.506	NaN	1287.3	30	0	147.24	0.035	+			17258	HYKYILGL	8	42	503.7878752647221	NaN	0	503.7887268066406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HYKYILGL_	ENST00000471640.1_1_2:183799522-183806825:-|nuORF	40.5726180659479	1.7418937515398478	1				NaN	NaN	0	NaN	2224	3274	5494
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5508	20.524	NaN	4165.9	30	0	1265	0.214	+			37209	SKGVRVPV	8	61	421.26621454706964	840.5178761609393	2	421.2662353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SKGVRVPV_	ENSG00000186487|ENST00000647738|MYT1L;MYT1L|p.K588Sfs*24|1|0.23|ENSG00000186487|chr2:1910294-1910294|T/-|frameshift_variant;MYT1L|p.K877Rfs*3|1|0.06|ENSG00000186487|chr2:1887500-1887500|T/-|frameshift_variant;nc|ENSG00000186487|Q9UL68-4|MYT1L	25.450171626174864	0.7628259754767981	1				NaN	NaN	0	NaN	2229	3277	5507
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5509	20.528	NaN	3784.3	30	0	1064.7	0.106	+			46803	VIAESVVKK	9	62	486.80790030901	971.60124768482	2	486.8078918457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VIAESVVKK_	ENSG00000112367|ENST00000230124|FIG4	95.81516180277367	0.04847050768394289	1				NaN	NaN	0	NaN	2230	3277	5507
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5510	20.53	NaN	6316.4	30	0	2139.4	0.106	+			21915	KRTHRINL	8	51	346.5498321708867	1036.62766711286	3	346.5498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KRTHRINL_	L1MB7_dup19903|chr17:40875288-40875575:+|4.471230206686413|0.3704688365676228|3.59|475.0|9|3|sense	21.9598887501803	0.7897753010812679	1				NaN	NaN	0	NaN	2231	3277	5507
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5511	20.532	NaN	2034.7	30	0	383.5	0.106	+			51273	YRNVLGKK	8	34	326.5344142806608	976.5814134421826	3	326.5343017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YRNVLGKK_	tr|U7SYR4|U7SYR4_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00904PE=4SV=1	15.641811463095205	0.7929430624199021	1				NaN	NaN	0	NaN	2232	3277	5507
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5512	20.533	NaN	1262.8	30	0	295.94	0.106	+			13371	GLAPPQPR	8	36	418.24238144484843	NaN	0	418.2427673339844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GLAPPQPR_	ENST00000321930.4_17:78977795-78978311:+|nuORF	35.200714571348534	1.7418937515398478	1				NaN	NaN	0	NaN	2233	3277	5507
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5513	20.535	NaN	2257.7	30	0	721.64	0.106				-1	DICYTTTSI	9	39	358.4990948972743	1072.4754552920228	3	358.4992370605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_DIC(Carbamidomethyl (C))YTTTSI_	ENSG00000136839|ENST00000259362|OR13C9;ENSG00000276119|ENST00000542196|OR13C2;ENSG00000277556|ENST00000374779|OR13C5;OR13C5|p.T246Rfs*4|1|0.03|ENSG00000277556|chr9:104598679-104598680|-/TT|frameshift_variant	19.996771675451527	0.6112419832031292	1				NaN	NaN	0	NaN	2234	3277	5507
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5514	20.537	NaN	1461.9	30	0	245.91	0.034	+			3459	ASRPSKLAL	9	54	471.7900783243116	941.5656037154232	2	471.7895202636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASRPSKLAL_	ENSG00000146426|ENST00000682666|TIAM2;nc|ENSG00000146426|Q8IVF5-2|TIAM2;nc|ENSG00000146426|Q8IVF5-4|TIAM2;nc|ENSG00000146426|Q8IVF5-5|TIAM2	39.252832667884924	0.4290233611298554	1				NaN	NaN	0	NaN	2235	3277	5507
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5525	20.562	NaN	89132	30	0	22691	0.214	+			5525	AVAIKAMAK	9	89	451.77781540339623	901.5410778735925	2	451.7780456542969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVAIKAMAK_	EIF5A|p.A145P|1|0.15|ENSG00000132507|chr17:7311608-7311608|G/C|missense_variant;ENSG00000132507|ENST00000336458|EIF5A;ENSG00000253626|ENST00000520547|EIF5AL1;nc|ENSG00000132507|P63241-2|EIF5A	129.68262048586715	0.015338143639892752	1				NaN	NaN	0	NaN	2243	3280	5524
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5526	20.566	NaN	13139	30	0	2644.6	0.106			+	46955	VKGGQKGRGSM	11	79	552.8005756726487	1103.5865984120974	2	552.80126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VKGGQKGRGSM_	REV__ENSG00000246705|ENST00000544848|H2AJ;REV__nc|ENSG00000246705|Q9BTM1-2|H2AJ	88.1336951990783	0.1064147647397003	1				NaN	NaN	0	NaN	2244	3280	5524
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5527	20.568	NaN	6808.5	30	0	858.21	0.106	+			47514	VQNGKHFKF	9	52	368.86966225119727	1103.5871573537918	3	368.8697204589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VQNGKHFKF_	ENSG00000163586|ENST00000295834|FABP1	45.97224482568171	0.3502073465782774	1				NaN	NaN	0	NaN	2245	3280	5524
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5528	20.569	NaN	5243.9	30	0	1002.8	0.106				-1	SICGKMFKK	9	69	549.7928183406808	1097.5710837481615	2	549.7938232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_SIC(Carbamidomethyl (C))GKMFKK_	ENSG00000105732|ENST00000359044|ZNF574;nc|ENSG00000105732|Q6ZN55-2|ZNF574	52.936696900407355	0.27249468807391813	1				NaN	NaN	0	NaN	2246	3280	5524
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5529	20.571	NaN	3027.9	30	0	426.6	0.106			+	31224	QGVILLIPGQ	10	60	519.3210875050986	1036.627622076997	2	519.3214721679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QGVILLIPGQ_	REV__ENSG00000177465|ENST00000326303|ACOT4	59.93077597824379	0.36646980200755325	1				NaN	NaN	0	NaN	2247	3280	5524
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5530	20.573	NaN	2374.8	30	0	489.18	0.106			+	32204	QSYSSQKQ	8	46	478.22861879893384	954.4426846646677	2	478.2284851074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QSYSSQKQ_	REV__ENSG00000270647|ENST00000605844|TAF15;REV__nc|ENSG00000270647|Q92804-2|TAF15;REV__TAF15|p.E285Rfs*41|1|0.28|ENSG00000270647|chr17:35838489-35838489|G/-|frameshift_variant;REV__TAF15|p.Y531Lfs*56|1|0.31|ENSG00000270647|chr17:35844881-35844882|-/G|frameshift_variant	39.252832667884924	0.6609488554722044	1				NaN	NaN	0	NaN	2248	3280	5524
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5531	20.575	NaN	2671.4	30	0	444.65	0.034	+			39697	STIKVKGTL	9	55	473.80010129709973	945.5856496609995	2	473.8002624511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STIKVKGTL_	tr|U7T0H2|U7T0H2_FUSNUAsparagine--tRNAligaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=asnSPE=3SV=1	23.52269567125451	0.5834155526130771	1				NaN	NaN	0	NaN	2249	3280	5524
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5542	20.601	NaN	13165	30	0	2046.8	0.214	+			41080	SVINKVTEK	9	75	509.30046640968214	1016.5863798861643	2	509.30023193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVINKVTEK_	ENSG00000124784|ENST00000379834|RIOK1;RIOK1|p.E533Rfs*20|1|0.19|ENSG00000124784|chr6:7414384-7414385|-/A|frameshift_variant	157.3448221729694	0.005157168637584854	1				NaN	NaN	0	NaN	2257	3283	5541
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5543	20.604	NaN	4817.6	30	0	1211.7	0.106			+	47665	VSDILRQIRQ	10	50	614.3618088756349	1226.7090648180697	2	614.3621215820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSDILRQIRQ_	REV__ENSG00000127481|ENST00000375254|UBR4;REV__nc|ENSG00000127481|Q5T4S7-2|UBR4;REV__nc|ENSG00000127481|Q5T4S7-3|UBR4;REV__nc|ENSG00000127481|Q5T4S7-4|UBR4;REV__nc|ENSG00000127481|Q5T4S7-5|UBR4;REV__UBR4|p.C4515Wfs*2|1|0.06|ENSG00000127481|chr1:19095626-19095626|G/-|frameshift_variant;REV__UBR4|p.L4771Cfs*7|1|0.25|ENSG00000127481|chr1:19088878-19088878|G/-|frameshift_variant;REV__UBR4|p.P4047Ifs*4|1|0.4|ENSG00000127481|chr1:19106932-19106933|GG/-|frameshift_variant	25.125986553469783	0.6746423231557295	1				NaN	NaN	0	NaN	2258	3283	5541
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5544	20.606	NaN	1895.1	30	0	595.95	0.106	+			14219	GSSMIPVRLLR	11	43	410.24485347874054	NaN	0	409.9102783203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GSSMIPVRLLR_	ENSG00000176401|ENST00000326282|EID2B	23.37791116691581	0.456735970842152	1				NaN	NaN	0	NaN	2259	3283	5541
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5545	20.608	NaN	2092.9	30	0	274.43	0.106	+			26966	LYKKTQETL	9	48	562.3216552734375	NaN	0	562.3216552734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LYKKTQETL_	ENSG00000101150|ENST00000346249|TPD52L2;nc|ENSG00000101150|O43399-5|TPD52L2;nc|ENSG00000101150|O43399-7|TPD52L2	58.78195531508484	0.1545138866451181	1				NaN	NaN	0	NaN	2260	3283	5541
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5546	20.61	NaN	2999.5	30	0	399.67	0.106	+			22202	KSTIGVEFATR	11	68	604.8351993414165	1207.6558457496328	2	604.835693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KSTIGVEFATR_	ENSG00000103769|ENST00000261890|RAB11A;ENSG00000185236|ENST00000328024|RAB11B;ENST00000598706.1_1_19:8455252-8465174:+|nuORF;nc|ENSG00000103769|P62491-2|RAB11A;nc|ENSG00000185236|Q15907-2|RAB11B	40.05817265558897	0.5571470695993369	1				NaN	NaN	0	NaN	2261	3283	5541
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5547	20.612	NaN	1219.7	30	0	240.89	0.106	+			22129	KSPEKDVPM	9	53	515.7655557916107	1029.5165586500214	2	515.765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KSPEKDVPM_	ENSG00000065000|ENST00000643116|AP3D1;nc|ENSG00000065000|O14617-2|AP3D1;nc|ENSG00000065000|O14617-3|AP3D1;nc|ENSG00000065000|O14617|AP3D1	41.42661286455405	0.403525789677298	1				NaN	NaN	0	NaN	2262	3283	5541
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5548	20.613	NaN	379.19	30	0	94.7	0.033			+	33850	RRGGMVVL	8	25	444.265869140625	NaN	0	444.265869140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RRGGMVVL_	REV__ENSG00000229674|ENST00000448797|H2AL3	10.184766708764876	1.7418937515398478	1				NaN	NaN	0	NaN	2263	3283	5541
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5561	20.641	NaN	19790	30	0	4553.4	0.214			+	33555	RLFIAELQ	8	66	330.5306518446546	988.5701261341637	3	330.53070068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RLFIAELQ_	REV__ENSG00000105223|ENST00000409735|PLD3	44.116797842482775	0.6307669463330267	1				NaN	NaN	0	NaN	2273	3286	5560
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5562	20.645	NaN	1620.8	30	0	140.45	0.106	+			50773	YEKRMATEV	9	52	563.7808373203807	1125.5471217075612	2	563.7821044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YEKRMATEV_	ENSG00000137154|ENST00000380394|RPS6;ENST00000497406.2_1_12:59414000-59414099:+|nuORF	30.317721548370564	0.5199124245378496	1				NaN	NaN	0	NaN	2274	3286	5560
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5563	20.647	NaN	1388.6	30	0	163.63	0.106			+	18125	ILFLWSKKS	9	52	561.3380126953125	NaN	0	561.3380126953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ILFLWSKKS_	REV__tr|U7SSA8|U7SSA8_FUSNUEamAdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01561PE=4SV=1	41.42661286455405	0.26577678759562784	1				NaN	NaN	0	NaN	2275	3286	5560
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5564	20.649	NaN	798.21	30	0	300.41	0.106			+	-1	CKFNVACA	8	27	456.70616492650663	911.3977769198133	2	456.705810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_C(Carbamidomethyl (C))KFNVACA_	REV__ENSG00000251287|ENST00000425059|ALG1L2;REV__ENST00000482043.1_1_7:6968215-6970400:+|nuORF	14.664097394203935	0.7913966407026132	1				NaN	NaN	0	NaN	2276	3286	5560
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5565	20.65	NaN	1372.2	30	0	170.49	0.106	+			3877	ATAPPSPLKR	10	40	519.3085228386183	1036.6024927440365	2	519.3082275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATAPPSPLKR_	ENSG00000124782|ENST00000379938|RREB1;ENST00000475946.5_1_6:7182144-7211943:+|nuORF;nc|ENSG00000124782|Q92766-3|RREB1;nc|ENSG00000124782|Q92766-5|RREB1;nc|ENSG00000124782|Q92766-6|RREB1;nc|ENSG00000124782|Q92766|RREB1	28.081489160057373	0.6505064946289502	1				NaN	NaN	0	NaN	2277	3286	5560
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5566	20.652	NaN	1897.5	30	0	323.91	0.106				-1	NMCKLRPLL	9	41	580.8190996515702	NaN	0	580.81884765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),Oxidation (M)	_NM(Oxidation (M))C(Carbamidomethyl (C))KLRPLL_	chr8:127322226-127339281|391|12.11|0.0|20.21|+|ENST00000645438|POU5F1B,POU5F1B;ENSG00000204531|ENST00000259915|POU5F1;ENSG00000212993|ENST00000696633|POU5F1B;ENST00000413175.2_1_1:155403304-155403850:+|nuORF;nc|ENSG00000204531|Q01860-2|POU5F1;POU5F1|p.G321Wfs*21|1|0.32|ENSG00000204531|chr6:31164723-31164724|-/A|frameshift_variant	18.324413293986947	0.3749620627292244	1				NaN	NaN	0	NaN	2278	3286	5560
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5567	20.654	NaN	1436.8	30	0	255.59	0.039	+			7962	DSSEVEKILQQ	11	34	638.3226318359375	NaN	0	638.3226318359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DSSEVEKILQQ_	ENSG00000173572|ENST00000342929|NLRP13;NLRP13|p.F460Sfs*10|1|0.2|ENSG00000173572|chr19:55912438-55912438|A/-|frameshift_variant;NLRP13|p.F543Lfs*8|1|0.42|ENSG00000173572|chr19:55912188-55912188|A/-|frameshift_variant	22.579656572578934	0.456735970842152	1				NaN	NaN	0	NaN	2279	3286	5560
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5575	20.674	NaN	5012.1	30	0	925.07	0.214	+			43334	TGATLYLLR	9	46	336.53410455626056	1006.5804842689818	3	336.5343322753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TGATLYLLR_	ENSG00000189043|ENST00000339600|NDUFA4;ENST00000486007.1_1_7:10977674-10979684:-|nuORF;NDUFA4|p.A37T|1|0.4|ENSG00000189043|chr7:10938830-10938830|C/T|missense_variant	18.324413293986947	0.6112419832031293	1				NaN	NaN	0	NaN	2284	3289	5574
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5576	20.677	NaN	2161.1	30	0	599.22	0.106	+			14032	GSGKVTFPK	9	47	460.7634154134204	919.5122778936408	2	460.7630615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSGKVTFPK_	AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK	88.17693792209575	0.07000514020414955	1				NaN	NaN	0	NaN	2285	3289	5574
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5577	20.679	NaN	3019.9	30	0	573.94	0.106			+	29477	PCRPLPMPI	9	53	341.8537371484995	1022.5393820456984	3	341.8538513183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PCRPLPMPI_	REV__HYDIN|p.V3416Gfs*64|1|0.15|ENSG00000157423|chr16:70879725-70879726|-/ACTCC|frameshift_variant	53.351449002276354	0.2690372970092375	1				NaN	NaN	0	NaN	2286	3289	5574
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5578	20.681	NaN	1413.4	30	0	163.84	0.106	+			13298	GKDFNLGMPW	10	43	582.7800400734922	1163.5455272137842	2	583.28125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GKDFNLGMPW_	ENST00000604826.1_1_6:34158651-34158831:+|nuORF	25.57405402267927	0.6709832231498071	1				NaN	NaN	0	NaN	2287	3289	5574
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5579	20.683	NaN	751.94	30	0	128.08	0.036	+			40074	STNPFRPQK	9	37	537.7877197265625	NaN	0	537.7877197265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STNPFRPQK_	ENSG00000174021|ENST00000370645|GNG5;nc|ENSG00000133136|A0A804HLA8|GNG5B	25.57405402267927	0.3484490411150625	1				NaN	NaN	0	NaN	2288	3289	5574
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5587	20.703	NaN	5502.9	30	0	922.35	0.214	+			12274	GAYDGKFEK	9	61	507.74816591969164	1013.4817789061833	2	507.74798583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GAYDGKFEK_	ENSG00000196363|ENST00000358625|WDR5;WDR5|p.V217Cfs*4|5|0.4|ENSG00000196363|chr9:134154476-134154476|C/-|frameshift_variant	104.42354056486148	0.0346881550498418	1				NaN	NaN	0	NaN	2293	3292	5586
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5588	20.706	NaN	9200.8	30	0	5066.9	0.106				-1	 	0	50	384.77196372905473	767.5293745249095	2	384.77191162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	2294	3292	5586
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5589	20.708	NaN	3747.6	30	0	1200.1	0.106	+			15257	GTTGAVLGQK	10	49	466.2636920682128	930.5128312032256	2	466.2633361816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTTGAVLGQK_	ENSG00000198643|ENST00000358781|FAM3D;FAM3D|p.G139Vfs*16|1|0.28|ENSG00000198643|chr3:58637183-58637183|C/-|frameshift_variant	150.36159442982594	0.008431331982545942	1				NaN	NaN	0	NaN	2295	3292	5586
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5590	20.71	NaN	4438.3	30	0	1845.9	0.106	+			12275	GAYDGKFEK	9	42	338.834329082526	1013.4811578477779	3	338.83416748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GAYDGKFEK_	ENSG00000196363|ENST00000358625|WDR5;WDR5|p.V217Cfs*4|5|0.4|ENSG00000196363|chr9:134154476-134154476|C/-|frameshift_variant	34.172542307311794	0.4838870758800184	1				NaN	NaN	0	NaN	2296	3292	5586
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5591	20.712	NaN	1933.4	30	0	413.04	0.034	+			49366	VVSSVVKVK	9	49	472.81037606597243	943.6061991987449	2	472.8103942871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVSSVVKVK_	ENSG00000100722|ENST00000251038|ZC3H14;nc|ENSG00000100722|Q6PJT7-10|ZC3H14;nc|ENSG00000100722|Q6PJT7-11|ZC3H14;nc|ENSG00000100722|Q6PJT7-2|ZC3H14;nc|ENSG00000100722|Q6PJT7-3|ZC3H14;nc|ENSG00000100722|Q6PJT7-4|ZC3H14;nc|ENSG00000100722|Q6PJT7-5|ZC3H14;nc|ENSG00000100722|Q6PJT7-9|ZC3H14;ZC3H14|p.K307Nfs*48|1|0.26|ENSG00000100722|chr14:88574746-88574746|A/-|frameshift_variant	56.72105179125745	0.24094814563026265	1				NaN	NaN	0	NaN	2297	3292	5586
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5601	20.735	NaN	2836.3	30	0	826.08	0.212				-1	RVQEAVESMVK	11	63	646.3374690629864	NaN	0	646.3370971679688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_RVQEAVESM(Oxidation (M))VK_	ENSG00000035141|ENST00000430566|FAM136A;ENST00000460307.1_1_2:70528513-70529143:-|nuORF;ENST00000498665.1_1_2:70527944-70529143:-|nuORF;nc|ENSG00000035141|Q96C01|FAM136A	32.03412808689991	0.42265347483761584	1				NaN	NaN	0	NaN	2304	3295	5600
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5602	20.739	NaN	4308.3	30	0	1974.7	0.106			+	48347	VTGKTLIIDK	10	46	363.2287416532115	1086.6643955598345	3	363.2288513183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTGKTLIIDK_	REV__tr|U7STQ9|U7STQ9_FUSNUTrmHfamilyRNAmethyltransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01153PE=4SV=1	54.722347961057174	0.4138398245444204	1				NaN	NaN	0	NaN	2305	3295	5600
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5603	20.741	NaN	1638.7	30	0	339.6	0.106	+			39571	STGLCSWCQ	9	53	492.6990083244911	983.3834637157822	2	492.6986999511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STGLCSWCQ_	ENST00000582176.1_1_3:127800095-127800410:-|nuORF	44.116797842482775	0.37197099687881774	1				NaN	NaN	0	NaN	2306	3295	5600
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5604	20.743	NaN	2067.2	30	0	311.62	0.106			+	-1	SQMVPQMYPMM	11	40	679.7822875976562	NaN	0	679.7822875976562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_SQMVPQMYPM(Oxidation (M))M_	REV__ENSG00000003096|ENST00000540167|KLHL13;REV__ENSG00000198642|ENST00000359039|KLHL9;REV__KLHL13|p.Y595Ifs*9|1|0.07|ENSG00000003096|chrX:117899094-117899094|C/-|frameshift_variant;REV__nc|ENSG00000003096|Q9P2N7-2|KLHL13;REV__nc|ENSG00000003096|Q9P2N7-4|KLHL13;REV__nc|ENSG00000003096|Q9P2N7-5|KLHL13;REV__nc|ENSG00000003096|Q9P2N7|KLHL13	18.262085536374414	0.456735970842152	1				NaN	NaN	0	NaN	2307	3295	5600
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5605	20.744	NaN	1232.2	30	0	249.95	0.106			+	45508	TYFEKFDL	8	31	531.7622414742036	NaN	0	531.761962890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TYFEKFDL_	REV__ADCY2|p.P894L|1|0.43|ENSG00000078295|chr5:7802270-7802270|C/T|missense_variant	17.364965105453717	1.7418937515398478	1				NaN	NaN	0	NaN	2308	3295	5600
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5606	20.746	NaN	2989.6	30	0	337.9	0.038	+			40481	STYATTIRDSK	11	69	621.8190521785042	1241.6235514238083	2	621.820068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STYATTIRDSK_	ENSG00000127054|ENST00000435064|INTS11;ENST00000421495.6_1_1:1249445-1259984:-|nuORF;ENST00000470030.6_1_1:1248876-1250311:-|nuORF;ENST00000488042.6_1_1:1250056-1259988:-|nuORF;ENST00000531020.1_1_1:1249679-1250311:-|nuORF;nc|ENSG00000127054|Q5TA45-2|INTS11;nc|ENSG00000127054|Q5TA45-3|INTS11;nc|ENSG00000127054|Q5TA45-4|INTS11;nc|ENSG00000127054|Q5TA45-5|INTS11	84.18827529504426	0.1225661884453432	1				NaN	NaN	0	NaN	2309	3295	5600
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5619	20.774	NaN	2968.6	30	0	360.28	0.214	+			20394	KETEIVKKL	9	61	544.3396336550628	1086.6647143769255	2	544.3405151367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KETEIVKKL_	ENSG00000115816|ENST00000234170|CEBPZ	120.30596017624542	0.02101454110788768	1				NaN	NaN	0	NaN	2319	3298	5618
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5620	20.778	NaN	1638.8	30	0	258.98	0.034	+			28226	NAVSVHHAL	9	52	474.25626234406946	946.4979717549389	2	474.2558288574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NAVSVHHAL_	ENSG00000156011|ENST00000327040|PSD3;ENST00000518315.5_1_8:18393255-18632402:-|nuORF;nc|ENSG00000156011|Q9NYI0-3|PSD3;nc|ENSG00000156011|Q9NYI0|PSD3;PSD3|p.D956Rfs*11|1|0.17|ENSG00000156011|chr8:18556274-18556275|-/G|frameshift_variant;PSD3|p.D956Tfs*14|1|0.29|ENSG00000156011|chr8:18556275-18556275|G/-|frameshift_variant	107.00750918261382	0.032051501805654005	1				NaN	NaN	0	NaN	2320	3298	5618
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5634	20.818	NaN	1209	30	0	186.56	0.142	+			3582	ASVEVSKLK	9	46	480.7893709698185	959.564189006437	2	480.78912353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASVEVSKLK_	CTCF|p.E691Sfs*30|1|0.45|ENSG00000102974|chr16:67637752-67637752|A/-|frameshift_variant;CTCF|p.R368C|1|0.59|ENSG00000102974|chr16:67620712-67620712|C/T|missense_variant;ENSG00000102974|ENST00000264010|CTCF;nc|ENSG00000102974|P49711-2|CTCF	38.753607047826485	0.4348790777924195	1				NaN	NaN	0	NaN	2328	3304	5633
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5641	20.836	NaN	884.73	30	0	264.6	0.214			+	7807	DPLNTDPK	8	34	450.22660405584486	NaN	0	450.2266540527344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DPLNTDPK_	REV__ENSG00000180530|ENST00000318948|NRIP1;REV__NRIP1|p.E729Rfs*5|1|0.34|ENSG00000180530|chr21:14966009-14966009|T/-|frameshift_variant;REV__NRIP1|p.E729Rfs*8|1|0.33|ENSG00000180530|chr21:14966008-14966009|-/T|frameshift_variant;REV__NRIP1|p.N516Tfs*11|1|0.46|ENSG00000180530|chr21:14966646-14966646|T/-|frameshift_variant;REV__NRIP1|p.R250Gfs*17|1|0.26|ENSG00000180530|chr21:14967445-14967445|T/-|frameshift_variant	21.9598887501803	1.7418937515398478	1				NaN	NaN	0	NaN	2332	3307	5640
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5642	20.84	NaN	1083	30	0	128.03	0.035	+			19270	KAFLTSHKG	9	34	330.1905888252148	NaN	0	330.1911315917969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KAFLTSHKG_	CMTM5|p.P126Rfs*55|1|0.17|ENSG00000166091|chr14:23378760-23378760|C/-|frameshift_variant;ENSG00000166091|ENST00000339180|CMTM5;nc|ENSG00000166091|Q96DZ9-2|CMTM5;nc|ENSG00000166091|Q96DZ9-3|CMTM5;nc|ENSG00000166091|Q96DZ9-4|CMTM5;nc|ENSG00000166091|Q96DZ9-5|CMTM5;nc|ENSG00000166091|Q96DZ9-6|CMTM5	19.1035232394073	0.3723251548669699	1				NaN	NaN	0	NaN	2333	3307	5640
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5648	20.856	NaN	9644.7	30	0	5488.3	0.144	+			30881	QEKEQIKTL	9	59	558.8161756358323	1115.6177983384646	2	558.8167114257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QEKEQIKTL_	CON__H-INV:HIT000292931;CON__P05787;CON__Q9H552;ENSG00000170421|ENST00000692008|KRT8;ENST00000409686.2_1_9:102067468-102068890:+|nuORF;ENST00000472924.1_1_3:160285772-160286174:+|nuORF;ENST00000550170.5_1_12:53294858-53298765:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	60.11826168202944	0.21262886028301267	1				NaN	NaN	0	NaN	2336	3310	5647
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5660	20.884	NaN	5507.3	30	0	947.94	0.214			+	6970	CPSAPRPQLAG	11	58	548.7822815487219	1095.5500101642438	2	548.7828369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CPSAPRPQLAG_	REV__ENSG00000224383|ENST00000412177|PRR29;REV__nc|ENSG00000224383|P0C7W0-2|PRR29;REV__nc|ENSG00000224383|P0C7W0-3|PRR29;REV__nc|ENSG00000224383|P0C7W0-4|PRR29	56.43379154798735	0.3552884390983883	1				NaN	NaN	0	NaN	2345	3313	5659
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5661	20.887	NaN	5214.6	30	0	549.22	0.106	+			1175	AENKEIQKL	9	73	536.8034590144312	1071.5923650956622	2	536.8037719726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AENKEIQKL_	ENSG00000106541|ENST00000419304|AGR2	147.73206827945663	0.0073977474511673896	1				NaN	NaN	0	NaN	2346	3313	5659
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5662	20.889	NaN	5496.4	30	0	427.51	0.106	+			42009	SVYRGSLTQR	10	73	583.8170150746912	1165.6194772161823	2	583.817138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVYRGSLTQR_	ENSG00000115648|ENST00000264605|MLPH;ENST00000477457.1_1_2:238455116-238462232:+|nuORF;nc|ENSG00000115648|Q9BV36-2|MLPH;nc|ENSG00000115648|Q9BV36-3|MLPH;nc|ENSG00000115648|Q9BV36-5|MLPH	89.02883481214508	0.13663399911061233	1				NaN	NaN	0	NaN	2347	3313	5659
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5663	20.891	NaN	2341.7	30	0	782.11	0.106	+			1501	AFVKENHR	8	37	334.18312929241165	999.5275584774349	3	334.1832275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AFVKENHR_	ENSG00000105483|ENST00000651546|CARD8;ENST00000522051.5_1_19:48714969-48735770:-|nuORF;ENST00000522773.5_1_19:48714969-48736545:-|nuORF;nc|ENSG00000105483|Q9Y2G2-1|CARD8;nc|ENSG00000105483|Q9Y2G2-4|CARD8;nc|ENSG00000105483|Q9Y2G2-7|CARD8	23.036711822280957	0.7814608874307191	1				NaN	NaN	0	NaN	2348	3313	5659
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5664	20.893	NaN	4370.6	30	0	940.24	0.106				-1	DIMLDLFIT	9	53	366.1908836323792	1095.5508214973377	3	366.19097900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_DIM(Oxidation (M))LDLFIT_	ENST00000462657.1_1_3:15731457-15737643:-|nuORF	25.57405402267927	0.5642445186134241	1				NaN	NaN	0	NaN	2349	3313	5659
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5665	20.895	NaN	1704	30	0	129.23	0.106	+			48738	VTVEVVGKGK	10	58	508.31091990098315	1014.6072868687663	2	508.3108215332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTVEVVGKGK_	ENSG00000100697|ENST00000343455|DICER1;ENST00000527416.2_1_14:95555309-95557645:-|nuORF;nc|ENSG00000100697|Q9UPY3-3|DICER1	44.639436926238396	0.506394993251866	1				NaN	NaN	0	NaN	2350	3313	5659
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5666	20.896	NaN	2222.9	30	0	327.18	0.037				-1	LLHLCCLLR	9	58	570.8243967557792	NaN	0	570.8247680664062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_LLHLCC(Carbamidomethyl (C))LLR_	nc|ENSG00000177030|O75398-5|DEAF1	33.51558372728122	0.30835390848773375	1				NaN	NaN	0	NaN	2351	3313	5659
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5680	20.926	NaN	3776.1	30	0	458.08	0.214	+			39487	STFIGRAAAK	10	62	511.2934459539707	1020.5723389747415	2	511.2934265136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STFIGRAAAK_	ENSG00000101361|ENST00000329276|NOP56;ENST00000466447.5_1_20:2636822-2638033:+|nuORF;ENST00000490753.1_1_20:2637050-2637903:+|nuORF;ENST00000492135.5_1_20:2636822-2638937:+|nuORF	82.7504851949679	0.1731497355276012	1				NaN	NaN	0	NaN	2362	3316	5679
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5681	20.93	NaN	4596.4	30	0	462.7	0.106	+			49774	VYQNHVQHL	9	63	569.2932299503035	1136.571906967407	2	569.2936401367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYQNHVQHL_	ARHGAP5|p.E893*|2|0.24|ENSG00000100852|chr14:32093338-32093339|-/T|frameshift_variant;ARHGAP5|p.F892Lfs*9|2|0.33|ENSG00000100852|chr14:32093339-32093339|T/-|frameshift_variant;ARHGAP5|p.F935Lfs*5|1|0.32|ENSG00000100852|chr14:32093469-32093469|T/-|frameshift_variant;ARHGAP5|p.N943Kfs*10|1|0.43|ENSG00000100852|chr14:32093489-32093490|-/A|frameshift_variant;ARHGAP5|p.S936*|1|0.32|ENSG00000100852|chr14:32093468-32093469|-/T|frameshift_variant;ARHGAP5|p.Y502Mfs*3|1|0.31|ENSG00000100852|chr14:32092168-32092168|T/-|frameshift_variant;ENSG00000100852|ENST00000345122|ARHGAP5;nc|ENSG00000100852|Q13017-2|ARHGAP5	115.45897859103373	0.02394878348088707	1				NaN	NaN	0	NaN	2363	3316	5679
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5682	20.932	NaN	2212.2	30	0	215.3	0.106			+	17242	HVTAGASI	8	47	378.2059392911082	754.3973256490165	2	378.2060241699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HVTAGASI_	REV__ENST00000542454.2_2_14:96671156-96704150:+|nuORF	71.37791200682192	0.3954169775488141	1				NaN	NaN	0	NaN	2364	3316	5679
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5683	20.933	NaN	1908.1	30	0	439.06	0.106	+			26249	LSSSASRVA	9	48	439.24057812815204	876.4666033231041	2	439.2405700683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSSSASRVA_	ENST00000356136.7_2_11:75526318-75526360:+|nuORF	54.776311868738084	0.25715957988447635	1				NaN	NaN	0	NaN	2365	3316	5679
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5684	20.935	NaN	3232.1	30	0	724.9	0.106	+			6448	AVYGGFKSK	9	55	478.7632540370487	955.5119551408974	2	478.7632141113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVYGGFKSK_	ENSG00000196616|ENST00000305046|ADH1B;nc|ENSG00000196616|P00325-2|ADH1B	58.78195531508484	0.22376836668196862	1				NaN	NaN	0	NaN	2366	3316	5679
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5685	20.937	NaN	2480.5	30	0	683.26	0.035	+			49756	VYPPHSHSI	9	54	518.764097046801	1035.513641160402	2	518.7642211914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VYPPHSHSI_	ENSG00000166888|ENST00000300134|STAT6;ENST00000555222.5_1_12:57490357-57492756:-|nuORF;nc|ENSG00000166888|P42226-2|STAT6;nc|ENSG00000166888|P42226-3|STAT6;STAT6|p.G815Efs*27|3|0.31|ENSG00000166888|chr12:57096672-57096672|C/-|frameshift_variant	31.954861631926434	0.5046124803899898	1				NaN	NaN	0	NaN	2367	3316	5679
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5686	20.938	NaN	2734.2	30	0	206.72	0.139			+	23452	LAEAFARGI	9	52	474.26892674582024	946.5233005584405	2	474.268798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LAEAFARGI_	REV__ENSG00000164120|ENST00000296522|HPGD;REV__ENST00000512410.1_1_4:175416602-175443578:-|nuORF;REV__HPGD|p.N38Qfs*3|1|0.16|ENSG00000164120|chr4:174522049-174522050|-/G|frameshift_variant;REV__HPGD|p.W37Lfs*4|1|0.11|ENSG00000164120|chr4:174522051-174522052|-/A|frameshift_variant;REV__nc|ENSG00000164120|P15428-2|HPGD;REV__nc|ENSG00000164120|P15428-4|HPGD;REV__nc|ENSG00000164120|P15428-5|HPGD	37.15910966729921	0.4535818937225704	1				NaN	NaN	0	NaN	2368	3316	5679
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5693	20.956	NaN	23088	30	0	2948.3	0.214	+			14202	GSSDVIIHR	9	74	492.2667713359153	982.5189897386306	2	492.26690673828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSSDVIIHR_	ENSG00000070047|ENST00000264555|PHRF1;ENST00000532550.1_1_11:601671-606691:+|nuORF;nc|ENSG00000070047|Q9P1Y6-2|PHRF1;nc|ENSG00000070047|Q9P1Y6-3|PHRF1;PHRF1|p.E1225Kfs*62|1|0.36|ENSG00000070047|chr11:609125-609125|G/-|frameshift_variant;PHRF1|p.L1393Cfs*8|1|0.38|ENSG00000070047|chr11:609628-609628|C/-|frameshift_variant;PHRF1|p.P938Qfs*23|2|0.45|ENSG00000070047|chr11:608263-608263|C/-|frameshift_variant;PHRF1|p.T1126Pfs*73|1|0.36|ENSG00000070047|chr11:608827-608827|C/-|frameshift_variant	127.46168284122857	0.016682644177004526	1				NaN	NaN	0	NaN	2372	3319	5692
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5694	20.96	NaN	7843.9	30	0	759.94	0.106	+			8340	EAKSTMICMNG	11	80	621.2689926096447	1240.5234322860892	2	621.2699584960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_EAKSTMIC(Carbamidomethyl (C))MNG_	ENST00000369393.7_1_6:90513083-90513194:-|nuORF	66.96192283764107	0.2613103798769313	1				NaN	NaN	0	NaN	2373	3319	5692
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5695	20.962	NaN	3221	30	0	742.42	0.106	+			5196	ATTQTIMQK	9	66	511.271303931543	1020.528054929886	2	511.2708740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATTQTIMQK_	ENSG00000196584|ENST00000359321|XRCC2	80.45461616416974	0.09558281504443908	1				NaN	NaN	0	NaN	2374	3319	5692
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5696	20.963	NaN	7356.6	30	0	737.94	0.106	+			42645	TAVIDHHNY	9	71	535.2566916088673	1068.4988302845345	2	535.2568969726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TAVIDHHNY_	ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656-2|DDOST;nc|ENSG00000244038|P39656-3|DDOST;nc|ENSG00000244038|P39656|DDOST	134.7655990226056	0.012935733000282069	1				NaN	NaN	0	NaN	2375	3319	5692
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5697	20.965	NaN	2331.9	30	0	225.09	0.106	+			1835	AIISVTKSK	9	47	473.8001487212393	945.5857445092786	2	473.8001708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AIISVTKSK_	ENSG00000105171|ENST00000585603|POP4	60.11826168202944	0.21262886028301267	1				NaN	NaN	0	NaN	2376	3319	5692
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5698	20.967	NaN	2502.5	30	0	367.33	0.106	+			19069	IYHHTGNNTF	10	49	602.28094639227	1202.54733985134	2	602.2811279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IYHHTGNNTF_	ENAH-TMEM63A|1|fusion;ENAH|p.Q196Dfs*57|1|0.22|ENSG00000154380|chr1:225519414-225519415|-/TC|frameshift_variant;ENSG00000154380|ENST00000366843|ENAH;nc|ENSG00000154380|Q8N8S7-3|ENAH;nc|ENSG00000154380|Q8N8S7|ENAH	30.317721548370564	0.6322445173429027	1				NaN	NaN	0	NaN	2377	3319	5692
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5699	20.969	NaN	5612.9	30	0	2616.8	0.036	+			33934	RSAFTVIRK	9	53	539.3297521086666	1076.6449512841332	2	539.330810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RSAFTVIRK_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	28.5767321226876	0.5361828959791866	1				NaN	NaN	0	NaN	2378	3319	5692
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5710	20.994	NaN	3305.5	30	0	533.58	0.213				-1	SMKHVGNQQY	10	52	604.278052010603	1206.541551088006	2	604.278076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_SM(Oxidation (M))KHVGNQQY_	ENSG00000136068|ENST00000295956|FLNB;ENST00000481470.5_1_3:58155276-58156486:+|nuORF;ENST00000484981.1_1_3:58151207-58156486:+|nuORF;ENST00000575892.1_1_16:31176981-31177245:+|nuORF;nc|ENSG00000136068|O75369-2|FLNB;nc|ENSG00000136068|O75369-3|FLNB;nc|ENSG00000136068|O75369-6|FLNB;nc|ENSG00000136068|O75369-7|FLNB;nc|ENSG00000136068|O75369-8|FLNB;nc|ENSG00000136068|O75369-9|FLNB	40.77816245573522	0.5419747034533848	1				NaN	NaN	0	NaN	2386	3322	5709
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5711	20.998	NaN	4296.2	30	0	907.73	0.106	+			5694	AVFASEVKK	9	56	489.78407448938293	977.5535960455659	2	489.7845153808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVFASEVKK_	ENSG00000105202|ENST00000221801|FBL;FBL|p.K318Rfs*2|1|0.09|ENSG00000105202|chr19:39834553-39834553|G/-|frameshift_variant	98.62937762414208	0.04060045538121712	1				NaN	NaN	0	NaN	2387	3322	5709
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5712	21	NaN	1669.2	30	0	270.63	0.106			+	38051	SPQRPALA	8	39	420.24035760405695	838.4661622749139	2	420.2402648925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SPQRPALA_	REV__ENST00000295760.11_3_3:13679162-13679222:+|nuORF	33.51558372728122	0.7005509609380386	1				NaN	NaN	0	NaN	2388	3322	5709
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5713	21.001	NaN	1948	30	0	339.05	0.106	+			35549	SAVSQSKEL	9	50	474.75299505225837	947.4914371713168	2	474.75286865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SAVSQSKEL_	ENSG00000136603|ENST00000259119|SKIL;ENST00000490894.1_1_3:170102333-170102591:+|nuORF;nc|ENSG00000136603|P12757-3|SKIL;nc|ENSG00000136603|P12757-5|SKIL	47.95952297671804	0.32689736945648856	1				NaN	NaN	0	NaN	2389	3322	5709
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5714	21.003	NaN	3236.7	30	0	1213.9	0.106			+	25250	LNKGVVEWR	9	38	367.5451266608195	NaN	0	367.54510498046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LNKGVVEWR_	REV__ENSG00000064687|ENST00000263094|ABCA7;REV__nc|ENSG00000064687|Q8IZY2-2|ABCA7	18.324413293986947	0.3749620627292244	1				NaN	NaN	0	NaN	2390	3322	5709
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5715	21.005	NaN	2398	30	0	885.82	0.106			+	19526	KAVNTDYLKK	10	42	590.3400102819041	1178.6654676306082	2	590.3405151367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KAVNTDYLKK_	REV__ENST00000416139.1_1_1:212482446-212482779:-|nuORF	21.68575002086885	0.7027366847906487	1				NaN	NaN	0	NaN	2391	3322	5709
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5716	21.007	NaN	2451.2	30	0	372	0.035			+	44356	TSIIDAETTG	10	55	504.24598780325556	1006.4774226733111	2	504.24627685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TSIIDAETTG_	REV__nc|ENSG00000156475|Q00005-3|PPP2R2B	53.351449002276354	0.42630798468005626	1				NaN	NaN	0	NaN	2392	3322	5709
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5727	21.033	NaN	16505	30	0	5867.2	0.214			+	20567	KFSSTSTASY	10	72	539.7556963838866	1077.4968398345732	2	539.7560424804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KFSSTSTASY_	REV__ENSG00000113163|ENST00000643780|CERT1;REV__nc|ENSG00000113163|Q9Y5P4-2|CERT1;REV__nc|ENSG00000113163|Q9Y5P4-3|CERT1	36.446750945000026	0.5818864909973037	1				NaN	NaN	0	NaN	2400	3325	5726
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5728	21.036	NaN	4373.2	30	0	1199.9	0.106	+			16834	HPDTGISSKAM	11	65	572.2758636241642	1142.5371743151284	2	572.2760009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HPDTGISSKAM_	ENSG00000124635|ENST00000339812|H2BC11;ENSG00000146047|ENST00000274764|H2BC1;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000196890|ENST00000693095|H2BC26;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000436555.1_1_1:228651947-228652295:-|nuORF;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;nc|ENSG00000203814|Q5QNW6-2|H2BC18	58.2462437865262	0.33910980880557884	1				NaN	NaN	0	NaN	2401	3325	5726
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5729	21.038	NaN	5429.6	30	0	1242.6	0.106	+			47813	VSKEHPVVI	9	48	336.53408964822694	1006.5804395448808	3	336.8685302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSKEHPVVI_	CAD|p.N1541Mfs*15|1|0.33|ENSG00000084774|chr2:27237773-27237773|A/-|frameshift_variant;CAD|p.Q1172Tfs*37|1|0.41|ENSG00000084774|chr2:27234113-27234114|-/C|frameshift_variant;ENSG00000084774|ENST00000264705|CAD	25.450171626174864	0.5654022654467333	1				NaN	NaN	0	NaN	2402	3325	5726
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5730	21.04	NaN	2387.3	30	0	374.38	0.106			+	28987	NSLKPKLDAL	10	51	549.8288495830506	1097.643146232901	2	549.8292236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NSLKPKLDAL_	REV__ENSG00000178235|ENST00000674365|SLITRK1	67.49366992349736	0.29779660154124327	1				NaN	NaN	0	NaN	2403	3325	5726
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5731	21.042	NaN	1413.5	30	0	261.63	0.106	+			29215	NVSTVELV	8	44	430.7395371321771	859.4645213311542	2	430.739013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NVSTVELV_	nc|ENSG00000089177|Q96L93-2|KIF16B	38.80614096846853	0.6637206697844082	1				NaN	NaN	0	NaN	2404	3325	5726
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5732	21.044	NaN	1897.4	30	0	260.95	0.106			+	46956	VKGGQKGRGSM	11	48	552.8005756726487	1103.5865984120974	2	552.8016967773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VKGGQKGRGSM_	REV__ENSG00000246705|ENST00000544848|H2AJ;REV__nc|ENSG00000246705|Q9BTM1-2|H2AJ	36.527901853580055	0.6054519527965578	1				NaN	NaN	0	NaN	2405	3325	5726
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5733	21.045	NaN	1165.1	30	0	135.02	0.034	+			23647	LARLLENK	8	40	478.79738550405307	955.5802180749062	2	478.7978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LARLLENK_	ENSG00000232040|ENST00000452236|SCAND3;ZBED9|p.D658*|1|0.02|ENSG00000232040|chr6:28574734-28574735|-/G|frameshift_variant;ZBED9|p.D658Vfs*16|1|0.04|ENSG00000232040|chr6:28574732-28574733|-/TA|frameshift_variant;ZBED9|p.F1112Lfs*29|1|0.25|ENSG00000232040|chr6:28572553-28572553|A/-|frameshift_variant;ZBED9|p.S934Qfs*17|1|0.4|ENSG00000232040|chr6:28573089-28573089|A/-|frameshift_variant;ZBED9|p.V1067Sfs*7|1|0.08|ENSG00000232040|chr6:28572690-28572691|-/T|frameshift_variant;ZBED9|p.V698Cfs*9|1|0.24|ENSG00000232040|chr6:28573797-28573798|-/A|frameshift_variant	24.20275056022122	0.7724576178584145	1				NaN	NaN	0	NaN	2406	3325	5726
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5745	21.071	NaN	3252.9	30	0	500.19	0.214				-1	 	0	50	449.2239442512528	896.4333355693057	2	449.223876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	2415	3328	5744
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5746	21.075	NaN	2502	30	0	235.84	0.106	+			44559	TTAQLQVQK	9	60	508.7895651258853	1015.5645773185706	2	508.7891540527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTAQLQVQK_	ENSG00000127603|ENST00000564288|MACF1;nc|ENSG00000127603|O94854|MACF1;nc|ENSG00000127603|Q9UPN3-2|MACF1;nc|ENSG00000127603|Q9UPN3-3|MACF1;nc|ENSG00000127603|Q9UPN3-4|MACF1;nc|ENSG00000127603|Q9UPN3-5|MACF1;nc|ENSG00000127603|Q9UPN3|MACF1	93.5975768576971	0.05472259948179787	1				NaN	NaN	0	NaN	2416	3328	5744
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5747	21.077	NaN	2433.9	30	0	207.84	0.035	+			40611	SVAKIAQYK	9	55	504.2972018855403	1006.5798508378806	2	504.2969055175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVAKIAQYK_	ENSG00000138750|ENST00000264883|NUP54;ENST00000504173.1_1_4:77045750-77069514:-|nuORF;ENST00000508465.5_1_4:77038865-77051838:-|nuORF;ENST00000508604.5_1_4:77039101-77051958:-|nuORF;nc|ENSG00000138750|Q7Z3B4-3|NUP54	60.11826168202944	0.21262886028301267	1				NaN	NaN	0	NaN	2417	3328	5744
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5758	21.103	NaN	13643	30	0	3848.8	0.214	+			37103	SISSGPIQK	9	55	458.75847212256275	915.5023913119255	2	458.7582092285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SISSGPIQK_	ENSG00000006611|ENST00000005226|USH1C;nc|ENSG00000006611|Q9Y6N9-2|USH1C;nc|ENSG00000006611|Q9Y6N9-3|USH1C;nc|ENSG00000006611|Q9Y6N9-4|USH1C;nc|ENSG00000006611|Q9Y6N9|USH1C	131.03138772384656	0.014687601201650916	1				NaN	NaN	0	NaN	2425	3331	5757
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5759	21.106	NaN	3378.9	30	0	215.05	0.106	+			33757	RPSQQLVYT	9	68	546.2940527315526	1090.573552529905	2	546.2944946289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RPSQQLVYT_	ENSG00000112494|ENST00000230256|UNC93A	44.116797842482775	0.37197099687881774	1				NaN	NaN	0	NaN	2426	3331	5757
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5760	21.108	NaN	1770.8	30	0	212.62	0.106	+			48650	VTSQVSNLK	9	53	488.2764099741485	974.5382670150971	2	488.27685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTSQVSNLK_	ENSG00000132952|ENST00000255304|USPL1;nc|ENSG00000132952|Q5W0Q7-2|USPL1	49.536043120802724	0.308405419312776	1				NaN	NaN	0	NaN	2427	3331	5757
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5761	21.11	NaN	2542.6	30	0	302.73	0.106			+	21382	KMKKTMTSI	9	64	534.3028516649973	1066.5911503967945	2	534.3030395507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KMKKTMTSI_	REV__ENST00000428729.1_1_6:3045620-3046031:+|nuORF	44.116797842482775	0.37197099687881774	1				NaN	NaN	0	NaN	2428	3331	5757
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5762	21.112	NaN	2945.2	30	0	385.58	0.106	+			50329	WTRGTLTQFG	10	60	583.8027252586046	1165.590897584009	2	583.8037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_WTRGTLTQFG_	ENST00000422000.5_1_12:498583-521038:+|nuORF	58.2462437865262	0.38179041844353556	1				NaN	NaN	0	NaN	2429	3331	5757
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5763	21.114	NaN	580.51	30	0	116.76	0.033	+			47749	VSGNTQPIG	9	29	436.7268981933594	NaN	0	436.7268981933594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VSGNTQPIG_	ENST00000409003.4_2_8:119208327-119208516:-|nuORF	27.882242232435846	0.3367954786602879	1				NaN	NaN	0	NaN	2430	3331	5757
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5774	21.139	NaN	4232.1	30	0	392.31	0.214	+			48238	VTCSQVHFK	9	69	553.2770210567954	NaN	0	553.2769775390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_VTC(Carbamidomethyl (C))SQVHFK_	ENSG00000174442|ENST00000307897|ZWILCH;nc|ENSG00000174442|Q9H900-2|ZWILCH	75.04331003522576	0.0883683072398826	1				NaN	NaN	0	NaN	2438	3334	5773
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5775	21.143	NaN	3535	30	0	541.15	0.106	+			39621	STICKYYQK	9	66	595.7977464406252	1189.5809399480504	2	595.7974853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_STIC(Carbamidomethyl (C))KYYQK_	ENSG00000075975|ENST00000170447|MKRN2	98.62937762414208	0.04060045538121712	1				NaN	NaN	0	NaN	2439	3334	5773
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5776	21.145	NaN	2902.2	30	0	409.24	0.106	+			46317	VEKHVVQSI	9	56	519.8007947892597	1037.5870366453194	2	519.8016357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VEKHVVQSI_	ENSG00000116459|ENST00000369722|ATP5PB;ENST00000402768.1_1_6:139935577-139935790:-|nuORF;ENST00000567330.1_1_16:75743035-75743521:-|nuORF	68.84614121027924	0.14577793175421136	1				NaN	NaN	0	NaN	2440	3334	5773
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5777	21.146	NaN	1822.5	30	0	254.34	0.106			+	7070	CVGCRYPRQ	9	52	541.2550324557969	NaN	0	541.29931640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_CVGCRYPRQ_	REV__ENSG00000261221|ENST00000568956|ZNF865	30.503639358989545	0.3235605894931338	1				NaN	NaN	0	NaN	2441	3334	5773
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5778	21.148	NaN	2593.1	30	0	398.04	0.106	+			46274	VEHKVETF	8	54	494.7582948167901	987.5020367003802	2	494.758056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VEHKVETF_	ENSG00000171863|ENST00000645674|RPS7;ENST00000444127.1_1_1:68708159-68708657:-|nuORF;ENST00000484240.1_1_17:44798950-44799232:-|nuORF	40.77816245573522	0.6514838689002179	1				NaN	NaN	0	NaN	2442	3334	5773
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5779	21.15	NaN	1758.9	30	0	196.79	0.106	+			29487	PCSLKHQAG	9	49	470.7375855206791	NaN	0	470.7372741699219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PCSLKHQAG_	ENST00000468564.6_1_22:44584872-44587985:+|nuORF	40.77816245573522	0.2702456086868081	1				NaN	NaN	0	NaN	2443	3334	5773
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5780	21.152	NaN	2513.1	30	0	390.84	0.035	+			38737	SSLNHIVEK	9	59	513.7824184123937	1025.5502838915872	2	513.7831420898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSLNHIVEK_	ENSG00000143624|ENST00000318967|INTS3;ENST00000491790.1_1_1:153733326-153733395:+|nuORF;nc|ENSG00000143624|Q68E01-3|INTS3;nc|ENSG00000143624|Q68E01|INTS3	79.48907831485694	0.09975780661107167	1				NaN	NaN	0	NaN	2444	3334	5773
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5792	21.178	NaN	8104.1	30	0	1343.6	0.214	+			43636	TIQSGEQPYK	10	71	575.7902748032991	1149.565996673398	2	575.791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TIQSGEQPYK_	ENSG00000168653|ENST00000372969|NDUFS5	131.115847015877	0.013122790858444951	1				NaN	NaN	0	NaN	2453	3337	5791
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5793	21.181	NaN	1577.3	30	0	576.77	0.106	+			36689	SGPTARAL	8	37	386.7191993395942	771.4238457459884	2	386.7192077636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SGPTARAL_	ENSG00000198488|ENST00000622824|B3GNT6;nc|ENSG00000198488|Q6ZMB0-3|B3GNT6	21.9598887501803	0.7897753010812679	1				NaN	NaN	0	NaN	2454	3337	5791
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5794	21.183	NaN	3135.8	30	0	398.47	0.106	+			45260	TVQGKVFER	9	56	532.2986063297103	1062.5826597262205	2	532.299560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVQGKVFER_	ENSG00000090382|ENST00000261267|LYZ	56.632244143249146	0.24168844994051353	1				NaN	NaN	0	NaN	2455	3337	5791
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5795	21.185	NaN	2090.9	30	0	226.39	0.106	+			34049	RSMEAHNILSK	11	53	643.3374117871181	1284.660270641036	2	643.3375854492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RSMEAHNILSK_	ENSG00000160075|ENST00000291386|SSU72;ENST00000378725.3_1_1:1480120-1509937:-|nuORF;nc|ENSG00000160075|Q9NP77-2|SSU72;SSU72|p.L82Ffs*8|1|0.34|ENSG00000160075|chr1:1544981-1544982|-/A|frameshift_variant	57.885488727062594	0.3423300441360433	1				NaN	NaN	0	NaN	2456	3337	5791
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5796	21.187	NaN	2562.3	30	0	191.45	0.106	+			51461	YVGGESPLKE	10	62	539.772936971759	1077.531321010318	2	539.7728271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YVGGESPLKE_	ENSG00000166479|ENST00000299608|TMX3;ENST00000569053.5_1_18:66357168-66367709:-|nuORF;nc|ENSG00000166479|Q96JJ7-2|TMX3	48.601550744091256	0.46988609897316763	1				NaN	NaN	0	NaN	2457	3337	5791
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5797	21.189	NaN	968.39	30	0	110.74	0.035				-1	VPSCSVVGAI	10	35	330.1748352050781	NaN	0	330.1748352050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_VPSC(Carbamidomethyl (C))SVVGAI_	ENSG00000093217|ENST00000207870|XYLB;nc|ENSG00000093217|O75191-2|XYLB	24.519189625965996	0.41966695327750003	1				NaN	NaN	0	NaN	2458	3337	5791
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5809	21.214	NaN	2590.5	30	0	572.65	0.214	+			44884	TTVQVLRSV	9	52	501.8005317605334	1001.5865105878668	2	501.8004455566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTVQVLRSV_	ENSG00000129219|ENST00000263088|PLD2;ENST00000575246.6_1_17:4711576-4721404:+|nuORF;nc|ENSG00000129219|O14939-4|PLD2	45.9519527083369	0.35044536499095585	1				NaN	NaN	0	NaN	2467	3340	5808
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5810	21.218	NaN	1210.8	30	0	119.94	0.106	+			21224	KLGLALAV	8	44	392.7692565917969	NaN	0	392.7692565917969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KLGLALAV_	nc|ENSG00000121940|Q96S66-4|CLCC1	29.841539824830324	1.7418937515398478	1				NaN	NaN	0	NaN	2468	3340	5808
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5811	21.22	NaN	1305.6	30	0	141.63	0.106				-1	SVAECQLMK	9	55	541.25390625	NaN	0	541.25390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_SVAEC(Carbamidomethyl (C))QLM(Oxidation (M))K_	ENSG00000105221|ENST00000392038|AKT2;ENST00000391844.8_1_19:40739781-40791100:-|nuORF;ENST00000537834.5_1_19:40745726-40771198:-|nuORF;nc|ENSG00000105221|P31751-2|AKT2	42.396135135203025	0.2590952873412954	1				NaN	NaN	0	NaN	2469	3340	5808
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5812	21.222	NaN	1129.8	30	0	254.94	0.036	+			26805	LVSLSGSIIY	10	43	526.3067844737666	NaN	0	526.3067626953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LVSLSGSIIY_	ENSG00000183034|ENST00000331427|OTOP2	17.364965105453717	0.4201028297492154	1				NaN	NaN	0	NaN	2470	3340	5808
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5819	21.24	NaN	7090.2	30	0	1529.8	0.214	+			32923	REAEETQSTL	10	65	582.2804606668241	1162.546368400448	2	582.2807006835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_REAEETQSTL_	ENSG00000125844|ENST00000377813|RRBP1;nc|ENSG00000125844|Q9P2E9-3|RRBP1	79.48907831485694	0.19979514868675113	1				NaN	NaN	0	NaN	2474	3343	5818
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5820	21.243	NaN	4399.9	30	0	786.19	0.106	+			24795	LIKKAGTEL	9	55	486.80798335703275	971.6014137808655	2	486.8078918457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LIKKAGTEL_	ENSG00000158874|ENST00000367990|APOA2	84.9155231211612	0.07920012719736333	1				NaN	NaN	0	NaN	2475	3343	5818
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5821	21.245	NaN	1998.5	30	0	726.44	0.106	+			44425	TSLSKNPK	8	47	437.75322045676177	873.4918879803236	2	437.75311279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TSLSKNPK_	RP1|p.R793Efs*55|4|0.41|ENSG00000104237|chr8:54626253-54626253|A/-|frameshift_variant	44.116797842482775	0.6307669463330267	1				NaN	NaN	0	NaN	2476	3343	5818
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5822	21.247	NaN	1229	30	0	174.44	0.106	+			1841	AIITPPPAKK	10	49	518.3321600785795	NaN	0	518.3327026367188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AIITPPPAKK_	ENSG00000113648|ENST00000511689|MACROH2A1;ENST00000360597.8_1_5:134681666-134724783:-|nuORF;ENST00000506532.5_1_5:134705062-134724783:-|nuORF;ENST00000513210.5_1_5:134695623-134724711:-|nuORF;nc|ENSG00000113648|O75367-3|MACROH2A1;nc|ENSG00000113648|O75367|MACROH2A1	36.31764250033197	0.3809266711384728	1				NaN	NaN	0	NaN	2477	3343	5818
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5823	21.249	NaN	1347	30	0	94.844	0.106	+			31384	QKGTLGCAKK	10	51	545.8037719726562	NaN	0	545.8037719726562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_QKGTLGC(Carbamidomethyl (C))AKK_	ENSG00000198796|ENST00000361673|ALPK2;ENST00000589204.1_1_18:56196243-56204256:-|nuORF	58.22992032128504	0.24873293749302264	1				NaN	NaN	0	NaN	2478	3343	5818
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5824	21.251	NaN	2843.4	30	0	503.42	0.106	+			4124	ATEHLSTLSEK	11	60	608.3144684145337	1214.6143838958674	2	608.3150634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATEHLSTLSEK_	ENSG00000118137|ENST00000236850|APOA1	92.23892857375223	0.08960911027004287	1				NaN	NaN	0	NaN	2479	3343	5818
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5825	21.252	NaN	1145.6	30	0	249.76	0.036	+			13307	GKFMLLASTF	10	41	557.803955078125	NaN	0	557.803955078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GKFMLLASTF_	ENST00000467242.1_1_2:30455222-30455939:+|nuORF	26.69291269510374	0.4125295221340092	1				NaN	NaN	0	NaN	2480	3343	5818
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5839	21.282	NaN	11138	30	0	1974.5	0.214				-1	 	0	72	551.8265376479535	1101.638522362707	2	551.8273315429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	2491	3346	5838
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5840	21.286	NaN	2124.7	30	0	255.23	0.106	+			3150	ASIDGCIKK	9	61	467.7549248337952	933.4952967343904	2	467.7549133300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASIDGCIKK_	ENSG00000166750|ENST00000299977|SLFN5;nc|ENSG00000166750|Q08AF3-2|SLFN5;SLFN5|p.P698Lfs*21|1|0.46|ENSG00000166750|chr17:35265300-35265300|C/-|frameshift_variant;SLFN5|p.Q524Sfs*11|1|0.73|ENSG00000166750|chr17:35264609-35264609|C/-|frameshift_variant	82.7504851949679	0.08565546331141553	1				NaN	NaN	0	NaN	2492	3346	5838
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5841	21.288	NaN	3825.5	30	0	554.82	0.106	+			1448	AEYVVRTFA	9	47	352.5208475281836	NaN	0	352.85491943359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEYVVRTFA_	ENSG00000060656|ENST00000373779|PTPRU;nc|ENSG00000060656|Q92729-3|PTPRU;nc|ENSG00000060656|Q92729-4|PTPRU;nc|ENSG00000060656|Q92729|PTPRU;TRNAU1AP-PTPRU|1|fusion;TRNAU1AP-PTPRU|2|fusion;TRNAU1AP-PTPRU|3|fusion	62.107414245175825	0.1403307765918332	1				NaN	NaN	0	NaN	2493	3346	5838
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5842	21.289	NaN	2047.8	30	0	193.54	0.106	+			27985	MVSAEISENRK	11	62	632.321723575681	NaN	0	632.32177734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MVSAEISENRK_	ENSG00000143751|ENST00000272091|SDE2;nc|ENSG00000143751|Q6IQ49-2|SDE2;nc|ENSG00000143751|Q6IQ49-3|SDE2	48.18798116849167	0.3283333270526623	1				NaN	NaN	0	NaN	2494	3346	5838
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5843	21.291	NaN	2515.8	30	0	204.32	0.106	+			5164	ATTAIAIHR	9	47	477.2797054797261	952.5448580262522	2	477.2799377441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATTAIAIHR_	ENST00000520964.1_1_X:134185341-134186186:-|nuORF;ENST00000522309.1_1_X:134185341-134186138:-|nuORF	71.87747018426188	0.13267044672804276	1				NaN	NaN	0	NaN	2495	3346	5838
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5844	21.293	NaN	1196	30	0	128.31	0.035			+	32550	QVTKPKEAL	9	52	507.3036148826172	1012.5926768320344	2	507.3036804199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QVTKPKEAL_	REV__ENSG00000136813|ENST00000684092|ECPAS;REV__nc|ENSG00000136813|Q5VYK3|ECPAS	40.77816245573522	0.41113185337114944	1				NaN	NaN	0	NaN	2496	3346	5838
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5845	21.294	NaN	1519	30	0	421.58	0.144				-1	ANGMKILYNT	10	29	380.8622131347656	NaN	0	380.8622131347656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_ANGM(Oxidation (M))KILYNT_	AGTPBP1|p.K1079Nfs*10|1|0.38|ENSG00000135049|chr9:85579025-85579025|T/-|frameshift_variant;AGTPBP1|p.S1080Ifs*2|1|0.29|ENSG00000135049|chr9:85579024-85579025|-/T|frameshift_variant;ENSG00000135049|ENST00000357081|AGTPBP1;nc|ENSG00000135049|Q9UPW5-2|AGTPBP1;nc|ENSG00000135049|Q9UPW5-3|AGTPBP1	22.579656572578934	0.4201028297492154	1				NaN	NaN	0	NaN	2497	3346	5838
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5857	21.321	NaN	9664.8	30	0	1627.2	0.214	+			41834	SVSTKLISK	9	70	481.7973771274435	961.580201321687	2	481.7972412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSTKLISK_	ENSG00000157741|ENST00000473989|UBN2;UBN2|p.G1191Efs*28|1|0.17|ENSG00000157741|chr7:139284473-139284473|G/-|frameshift_variant	101.45984612302182	0.0377122763612125	1				NaN	NaN	0	NaN	2506	3349	5856
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5858	21.325	NaN	1662.7	30	0	199.98	0.106			+	34178	RTCPITENDKK	11	63	681.3452270235508	NaN	0	681.3453369140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_RTC(Carbamidomethyl (C))PITENDKK_	REV__ENSG00000138347|ENST00000358913|MYPN;REV__nc|ENSG00000138347|Q86TC9-2|MYPN	51.52775601994872	0.30434581687306933	1				NaN	NaN	0	NaN	2507	3349	5856
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5859	21.327	NaN	2214.8	30	0	387.64	0.106			+	-1	ILMLSSCPI	9	43	350.51722257642155	1048.5298383294646	3	350.5174255371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_ILM(Oxidation (M))LSSC(Carbamidomethyl (C))PI_	REV__ENSG00000126822|ENST00000247226|PLEKHG3;REV__nc|ENSG00000126822|A1L390-3|PLEKHG3;REV__PLEKHG3|p.P557Qfs*19|1|0.1|ENSG00000126822|chr14:64741182-64741182|C/-|frameshift_variant	35.61828744233558	0.47037581924408073	1				NaN	NaN	0	NaN	2508	3349	5856
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5860	21.329	NaN	1521.3	30	0	225.25	0.106	+			19607	KDFSEKHSTL	10	47	596.304244218868	1190.593935504536	2	596.3037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KDFSEKHSTL_	ENSG00000100209|ENST00000216027|HSCB;ENST00000485599.5_1_22:29138272-29141477:+|nuORF	42.86426827375447	0.522752283233888	1				NaN	NaN	0	NaN	2509	3349	5856
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5861	21.331	NaN	1406.2	30	0	161.58	0.035			+	21564	KPCLVVSIQ	9	52	493.7889404296875	NaN	0	493.7889404296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KPCLVVSIQ_	REV__ENST00000310271.6_1_3:52232228-52233451:+|nuORF	34.172542307311794	0.30503706118289736	1				NaN	NaN	0	NaN	2510	3349	5856
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5872	21.356	NaN	4395.1	30	0	523.49	0.214	+			18040	IIQAKTRSL	9	57	515.3246030784272	1028.6346532236544	2	515.3245239257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IIQAKTRSL_	ENSG00000197892|ENST00000524189|KIF13B;KIF13B|p.K1288Rfs*13|1|0.34|ENSG00000197892|chr8:29113530-29113530|T/-|frameshift_variant	69.6276240434122	0.14239879520340665	1				NaN	NaN	0	NaN	2518	3352	5871
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5873	21.359	NaN	2546.1	30	0	1425.1	0.106	+			44887	TTVSRGIAPAP	11	50	535.3037838893698	1068.5930148455395	2	535.3041381835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTVSRGIAPAP_	ENSG00000197892|ENST00000524189|KIF13B	23.52269567125451	0.7430573033454468	1				NaN	NaN	0	NaN	2519	3352	5871
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5874	21.361	NaN	2030	30	0	313.18	0.106				-1	SHHLCYPDRTH	11	51	711.8216307396191	1421.628708546038	2	711.8218994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SHHLC(Carbamidomethyl (C))YPDRTH_	ENSG00000079102|ENST00000436581|RUNX1T1;ENST00000523290.5_1_8:93023196-93107415:-|nuORF;RUNX1T1|p.P286Sfs*57|1|0.04|ENSG00000079102|chr8:91991774-91991775|-/TAAGA|frameshift_variant;RUNX1T1|p.T371Qfs*8|1|0.34|ENSG00000079102|chr8:91986292-91986292|T/-|frameshift_variant	26.063383197487333	0.7164075632144343	1				NaN	NaN	0	NaN	2520	3352	5871
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5875	21.363	NaN	4478.9	30	0	603.63	0.106	+			1811	AIFQGKLEKK	10	73	581.3529903830666	1160.6914278329332	2	581.3529663085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AIFQGKLEKK_	ENSG00000118322|ENST00000327245|ATP10B	77.28774426308219	0.21777985819004636	1				NaN	NaN	0	NaN	2521	3352	5871
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5876	21.365	NaN	2180.7	30	0	206.5	0.106	+			15906	HAANQSYQY	9	55	541.2384526956093	1080.4623524580186	2	541.2399291992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HAANQSYQY_	ENSG00000130402|ENST00000252699|ACTN4;ENST00000588618.5_1_19:39138385-39212431:+|nuORF;nc|ENSG00000130402|O43707-2|ACTN4;nc|ENSG00000130402|O43707-3|ACTN4	40.77816245573522	0.41113185337114944	1				NaN	NaN	0	NaN	2522	3352	5871
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5877	21.367	NaN	1489.6	30	0	259.6	0.106	+			7681	DLFRRYEK	8	48	563.805908203125	NaN	0	563.805908203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DLFRRYEK_	ENSG00000138162|ENST00000369005|TACC2;ENST00000465600.1_1_10:124008150-124013568:+|nuORF;nc|ENSG00000138162|O95359-1|TACC2;nc|ENSG00000138162|O95359-2|TACC2;nc|ENSG00000138162|O95359-3|TACC2;nc|ENSG00000138162|O95359-5|TACC2;nc|ENSG00000138162|O95359-6|TACC2	23.04248740728303	1.7418937515398478	1				NaN	NaN	0	NaN	2523	3352	5871
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5878	21.369	NaN	1372	30	0	229.68	0.035	+			3361	ASNPATFQR	9	42	496.251283991749	990.488015050298	2	496.252197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASNPATFQR_	nc|ENSG00000286140|P0CG12|DERPC	43.650786325866115	0.37743712540499297	1				NaN	NaN	0	NaN	2524	3352	5871
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5887	21.39	NaN	5842.6	30	0	1381.6	0.214	+			39688	STIKFQMKK	9	61	555.8199121805592	1109.6252714279183	2	555.8207397460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STIKFQMKK_	ENSG00000198755|ENST00000322203|RPL10A;ENST00000464112.5_1_6:35436546-35438524:+|nuORF;ENST00000472730.1_1_3:61728131-61728755:-|nuORF;ENST00000478340.2_1_6:35437033-35438524:+|nuORF	78.26377905018397	0.10505600812668463	1				NaN	NaN	0	NaN	2530	3355	5886
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5888	21.394	NaN	1982.2	30	0	1039.4	0.106	+			27990	MVSRSIFC	8	42	471.72968517286887	941.4448174125378	2	471.7298278808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MVSRSIFC_	ENST00000508189.1_1_4:162307532-162307586:+|nuORF	42.47446043378293	0.6409579893742323	1				NaN	NaN	0	NaN	2531	3355	5886
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5889	21.396	NaN	2696.4	30	0	657.21	0.106	+			35496	SATRLLSFL	9	50	336.53408964822694	1006.5804395448808	3	336.53424072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SATRLLSFL_	ENST00000484939.1_1_1:84971984-84972092:+|nuORF	24.20275056022122	0.577060078256802	1				NaN	NaN	0	NaN	2532	3355	5886
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5890	21.398	NaN	1399.4	30	0	850.29	0.106	+			1654	AGPPGGRSL	9	27	406.224622076378	810.434691219556	2	406.2244873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AGPPGGRSL_	ENSG00000110717|ENST00000313468|NDUFS8	20.94693142431847	0.6074874384046576	1				NaN	NaN	0	NaN	2533	3355	5886
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5891	21.399	NaN	1842.7	30	0	334.22	0.035	+			44774	TTQDPLSNK	9	47	502.2561155520591	1002.4976781709182	2	502.2564697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TTQDPLSNK_	ENSG00000009413|ENST00000368802|REV3L;nc|ENSG00000009413|O60673-2|REV3L;REV3L|p.G2684Vfs*11|1|0.35|ENSG00000009413|chr6:111329724-111329724|T/-|frameshift_variant;REV3L|p.I1992Lfs*2|1|0.29|ENSG00000009413|chr6:111367814-111367814|T/-|frameshift_variant;REV3L|p.N1694Mfs*4|2|0.16|ENSG00000009413|chr6:111373274-111373274|T/-|frameshift_variant	47.95952297671804	0.32689736945648856	1				NaN	NaN	0	NaN	2534	3355	5886
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5900	21.419	NaN	6300.5	30	0	534.61	0.214	+			968	AEKAVTKEEF	10	83	576.3002311291978	1150.5859093251954	2	576.3003540039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEKAVTKEEF_	ENSG00000168028|ENST00000301821|RPSA;ENST00000478027.2_1_3:39450050-39453856:+|nuORF;nc|ENSG00000288920|A0A8I5KQE6|RPSA2	77.28774426308219	0.21777985819004636	1				NaN	NaN	0	NaN	2540	3358	5899
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5901	21.423	NaN	2491.6	30	0	415.41	0.106	+			45203	TVNPVAIHK	9	64	489.790187453261	977.565821973322	2	489.78936767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVNPVAIHK_	ENSG00000074047|ENST00000361492|GLI2;ENST00000438299.5_1_2:121728002-121748192:+|nuORF;ENST00000452692.5_1_2:121728002-121748192:+|nuORF;GLI2|p.R1387Lfs*143|1|0.1|ENSG00000074047|chr2:120990074-120990074|G/-|frameshift_variant;nc|ENSG00000074047|P10070-1|GLI2;nc|ENSG00000074047|P10070-2|GLI2;nc|ENSG00000074047|P10070-3|GLI2;nc|ENSG00000074047|P10070-4|GLI2;nc|ENSG00000074047|P10070|GLI2	45.02220120713402	0.3613509778819777	1				NaN	NaN	0	NaN	2541	3358	5899
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5902	21.425	NaN	2925.7	30	0	636.22	0.035	+			11202	FHLKFQLA	8	57	502.2896495330956	1002.5647461329912	2	502.2899169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FHLKFQLA_	ENSG00000188107|ENST00000503581|EYS;EYS|p.F2463Rfs*16|1|0.05|ENSG00000188107|chr6:63806214-63806215|-/AAGACCT|frameshift_variant;nc|ENSG00000188107|Q5T1H1|EYS	46.76643321282427	0.6143254112625767	1				NaN	NaN	0	NaN	2542	3358	5899
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5909	21.443	NaN	4969.1	30	0	1024.7	0.214	+			6277	AVSSLIRNK	9	61	494.30078052681046	986.5870081204209	2	494.3006286621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVSSLIRNK_	ENSG00000181929|ENST00000548065|PRKAG1;ENST00000546531.5_1_12:49396684-49399341:-|nuORF;ENST00000550448.5_1_12:49398244-49398481:-|nuORF;nc|ENSG00000181929|P54619-2|PRKAG1;nc|ENSG00000181929|P54619-3|PRKAG1	110.11987700582712	0.028875675806141952	1				NaN	NaN	0	NaN	2546	3361	5908
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5910	21.446	NaN	2947.1	30	0	566	0.035			+	37047	SIRVQSKY	8	42	327.52201225858914	979.5442073759675	3	327.5222473144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SIRVQSKY_	REV__ENST00000479181.1_1_7:140404755-140406423:+|nuORF	19.359975847455235	0.7988239741663654	1				NaN	NaN	0	NaN	2547	3361	5908
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5918	21.466	NaN	3541.2	30	0	602.56	0.214	+			2578	AQFGGKILRK	10	57	559.3452771980021	1116.6760014628042	2	559.84765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AQFGGKILRK_	ENSG00000070047|ENST00000264555|PHRF1;nc|ENSG00000070047|Q9P1Y6-2|PHRF1;nc|ENSG00000070047|Q9P1Y6-3|PHRF1;PHRF1|p.E1225Kfs*62|1|0.36|ENSG00000070047|chr11:609125-609125|G/-|frameshift_variant;PHRF1|p.L1393Cfs*8|1|0.38|ENSG00000070047|chr11:609628-609628|C/-|frameshift_variant;PHRF1|p.P938Qfs*23|2|0.45|ENSG00000070047|chr11:608263-608263|C/-|frameshift_variant;PHRF1|p.T1126Pfs*73|1|0.36|ENSG00000070047|chr11:608827-608827|C/-|frameshift_variant	52.936696900407355	0.4300801048568001	1				NaN	NaN	0	NaN	2552	3364	5917
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5919	21.47	NaN	1967.5	30	0	159.54	0.106	+			40048	STNLIIHQK	9	57	527.3063114470078	1052.5980699608156	2	527.3063354492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STNLIIHQK_	ENSG00000196152|ENST00000342483|ZNF79	60.11826168202944	0.21262886028301267	1				NaN	NaN	0	NaN	2553	3364	5917
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5920	21.472	NaN	2294.6	30	0	769.09	0.035			+	13358	GLAAARTRR	9	45	324.53430979116166	NaN	0	324.5341796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GLAAARTRR_	REV__ENST00000474018.1_1_6:170101867-170102065:-|nuORF	25.450171626174864	0.34907449758287085	1				NaN	NaN	0	NaN	2554	3364	5917
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5927	21.488	NaN	6396.2	30	0	802.59	0.214			+	26008	LSKSISAIR	9	66	487.80305336370304	973.5915537942061	2	487.8026123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSKSISAIR_	REV__ENSG00000103642|ENST00000261893|LACTB;REV__LACTB|p.E253Kfs*42|1|0.25|ENSG00000103642|chr15:63127489-63127489|A/-|frameshift_variant;REV__nc|ENSG00000103642|P83111-2|LACTB	83.6470233535746	0.08277643980271215	1				NaN	NaN	0	NaN	2558	3367	5926
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5928	21.492	NaN	1573.6	30	0	197.38	0.106			+	32126	QSLFLLVRCL	10	54	624.8602444233386	1247.705935913477	2	624.8595581054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_QSLFLLVRC(Carbamidomethyl (C))L_	REV__ENSG00000184277|ENST00000333202|TM2D3;REV__ENST00000559024.5_1_15:102186874-102192564:-|nuORF;REV__ENST00000560910.5_1_15:102186874-102192564:-|nuORF;REV__ENST00000561356.1_1_15:102191577-102192564:-|nuORF;REV__nc|ENSG00000184277|Q9BRN9-2|TM2D3	60.11826168202944	0.36476464221954025	1				NaN	NaN	0	NaN	2559	3367	5926
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5929	21.494	NaN	777.72	30	0	85.43	0.106			+	20683	KGPDGTPGK	9	39	428.7294389949875	855.444325056775	2	428.7293395996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KGPDGTPGK_	REV__COL1A2|p.P840Lfs*183|1|0.17|ENSG00000164692|chr7:94423068-94423068|C/-|frameshift_variant;REV__ENSG00000164692|ENST00000297268|COL1A2	32.81241826257853	0.4965981579233955	1				NaN	NaN	0	NaN	2560	3367	5926
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5930	21.496	NaN	1480.5	30	0	292.69	0.035			+	-1	EMEEMLAL	8	48	491.2169905421435	NaN	0	491.2166442871094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_EMEEM(Oxidation (M))LAL_	REV__ENSG00000062822|ENST00000440232|POLD1;REV__ENST00000600746.1_1_19:50902108-50905775:+|nuORF;REV__POLD1|p.P116Hfs*53|3|0.16|ENSG00000062822|chr19:50401798-50401798|G/-|frameshift_variant;REV__POLD1|p.R180Gfs*3|1|0.4|ENSG00000062822|chr19:50402067-50402067|G/-|frameshift_variant;REV__POLD1|p.T642Hfs*97|1|0.26|ENSG00000062822|chr19:50409147-50409148|-/C|frameshift_variant;REV__POLD1|p.V933Cfs*21|1|0.29|ENSG00000062822|chr19:50415796-50415797|-/A|frameshift_variant	33.51558372728122	1.7418937515398478	1				NaN	NaN	0	NaN	2561	3367	5926
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5936	21.51	NaN	1207.7	30	0	249.28	0.143	+			40154	STQPTSYDQ	9	45	513.7231948446226	NaN	0	513.7235107421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STQPTSYDQ_	ENSG00000182944|ENST00000397938|EWSR1;ENST00000479135.5_1_22:29673993-29684776:+|nuORF;ENST00000483415.5_1_22:29664325-29684776:+|nuORF;EWSR1|p.M605Hfs*40|1|0.09|ENSG00000182944|chr22:29299731-29299732|-/C|frameshift_variant;EWSR1|p.M605Tfs*41|1|0.09|ENSG00000182944|chr22:29299733-29299734|-/CCTC|frameshift_variant;EWSR1|p.P622Lfs*4|1|0.39|ENSG00000182944|chr22:29299775-29299775|G/-|frameshift_variant;nc|ENSG00000182944|Q01844-2|EWSR1;nc|ENSG00000182944|Q01844-3|EWSR1;nc|ENSG00000182944|Q01844-4|EWSR1;nc|ENSG00000182944|Q01844-5|EWSR1;nc|ENSG00000182944|Q01844-6|EWSR1	19.996771675451527	0.3693019437812985	1				NaN	NaN	0	NaN	2564	3370	5935
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5944	21.532	NaN	1654.2	30	0	202.36	0.143	+			8902	EEVAQQKSL	9	54	516.2723327419018	1030.5301125506035	2	516.2717895507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EEVAQQKSL_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	63.53385203322761	0.18415635464017938	1				NaN	NaN	0	NaN	2569	3373	5943
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5949	21.549	NaN	2146.8	30	0	955.74	0.214				-1	 	0	48	481.25073778204063	960.4869226308813	2	481.25079345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	2571	3376	5948
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5950	21.552	NaN	2259.9	30	0	219.82	0.106	+			36772	SIAAVSGVKR	10	54	494.30078052681046	986.5870081204209	2	494.8046569824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SIAAVSGVKR_	ENSG00000125337|ENST00000643607|KIF25;nc|ENSG00000125337|Q9UIL4-2|KIF25	37.81151784470057	0.569310847604193	1				NaN	NaN	0	NaN	2572	3376	5948
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5951	21.554	NaN	8699.1	30	0	2129.6	0.106	+			9901	EQNIAAFLK	9	58	345.1938647852967	1032.55976495609	3	345.19390869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EQNIAAFLK_	DNAH3|p.E3315Dfs*37|1|0.1|ENSG00000158486|chr16:20963939-20963940|-/A|frameshift_variant;DNAH3|p.G2194Efs*14|1|0.34|ENSG00000158486|chr16:20997303-20997303|C/-|frameshift_variant;DNAH3|p.I2375Sfs*8|1|0.13|ENSG00000158486|chr16:20985619-20985619|T/-|frameshift_variant;DNAH3|p.N572T|1|0.22|ENSG00000158486|chr16:21117302-21117302|T/G|missense_variant;DNAH3|p.V2829Yfs*9|1|0.43|ENSG00000158486|chr16:20965399-20965399|C/-|frameshift_variant;ENSG00000158486|ENST00000698260|DNAH3;nc|ENSG00000158486|Q8TD57-2|DNAH3;nc|ENSG00000158486|Q8TD57-3|DNAH3;nc|ENSG00000158486|Q8TD57|DNAH3	29.14955571784316	0.5308295550522326	1				NaN	NaN	0	NaN	2573	3376	5948
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5952	21.556	NaN	1920.6	30	0	233.72	0.106			+	29887	PLLHRLSPG	9	51	330.5346157917203	988.5820179753609	3	330.534423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PLLHRLSPG_	REV__AP5Z1|p.Q696Rfs*6|3|0.43|ENSG00000242802|chr7:4790814-4790814|C/-|frameshift_variant;REV__ENSG00000242802|ENST00000649063|AP5Z1;REV__ENST00000477680.5_1_7:4815294-4829561:+|nuORF;REV__ENST00000491375.1_1_7:4822973-4823147:+|nuORF;REV__ENST00000496303.5_1_7:4815289-4829878:+|nuORF;REV__nc|ENSG00000242802|O43299-2|AP5Z1	18.324413293986947	0.6112419832031293	1				NaN	NaN	0	NaN	2574	3376	5948
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5953	21.558	NaN	669.81	30	0	80.773	0.033	+			29371	PAGRVTPVS	9	41	442.253129250628	NaN	0	442.2528381347656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PAGRVTPVS_	ENST00000521249.1_1_14:102697414-102697822:-|nuORF	37.15910966729921	0.2899585034171616	1				NaN	NaN	0	NaN	2575	3376	5948
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5965	21.584	NaN	15423	30	0	3002.7	0.214	+			15223	GTSSVIVSR	9	54	453.25611042413794	904.4976679150759	2	453.2557373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTSSVIVSR_	ENSG00000072803|ENST00000517395|FBXW11;nc|ENSG00000072803|Q9UKB1-2|FBXW11;nc|ENSG00000072803|Q9UKB1-3|FBXW11;nc|ENSG00000072803|Q9UKB1|FBXW11	150.36159442982594	0.006784847064083231	1				NaN	NaN	0	NaN	2584	3379	5964
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5966	21.588	NaN	1896.1	30	0	214.76	0.106			+	6975	CPTIHKFK	8	54	487.2689397016807	972.5233264701615	2	487.2687072753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_CPTIHKFK_	REV__PPARG|p.L298Cfs*38|1|0.26|ENSG00000132170|chr3:12416771-12416771|C/-|frameshift_variant	51.33545320467046	0.5859736979383976	1				NaN	NaN	0	NaN	2585	3379	5964
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5967	21.59	NaN	1203.1	30	0	178.65	0.106			+	21212	KLFLGNSNK	9	51	510.79583740234375	NaN	0	510.79583740234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KLFLGNSNK_	REV__tr|U7T3J3|U7T3J3_FUSNUAutotransporterdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00684PE=4SV=1	45.97224482568171	0.23445038899310136	1				NaN	NaN	0	NaN	2586	3379	5964
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5968	21.591	NaN	2826.4	30	0	1045.3	0.106	+			31613	QLYWSHPRK	9	54	607.8250400102824	1213.6355270873646	2	608.3255004882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QLYWSHPRK_	ENSG00000213741|ENST00000245458|RPS29;ENST00000554075.1_1_14:50052568-50053064:-|nuORF;ENST00000557367.2_1_14:50053001-50053064:-|nuORF;nc|ENSG00000213741|P62273-2|RPS29	68.84614121027924	0.14577793175421136	1				NaN	NaN	0	NaN	2587	3379	5964
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5969	21.593	NaN	1638.8	30	0	320.87	0.106			+	50379	WYCPEDHQWL	10	45	688.7882416066441	1375.561930280088	2	688.7879638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_WYCPEDHQWL_	REV__ENSG00000074071|ENST00000397375|MRPS34	23.04248740728303	0.69165701907106	1				NaN	NaN	0	NaN	2588	3379	5964
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5970	21.595	NaN	2697.9	30	0	370.64	0.035	+			3321	ASLVGQTSPK	10	61	494.27704112396754	986.5395293147351	2	494.2767639160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASLVGQTSPK_	ENSG00000055044|ENST00000264279|NOP58	97.59673978297657	0.0875810153152853	1				NaN	NaN	0	NaN	2589	3379	5964
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5982	21.62	NaN	5806.2	30	0	3811.7	0.214				-1	QILIMTFVT	9	38	541.300955876383	1080.587358819566	2	541.3016357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_QILIM(Oxidation (M))TFVT_	ENSG00000125304|ENST00000376387|TM9SF2	24.20275056022122	0.577060078256802	1				NaN	NaN	0	NaN	2598	3382	5981
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5983	21.624	NaN	6456.4	30	0	704.74	0.106	+			43571	TICGAMSSIKK	11	76	598.3119327224961	1194.609312511792	2	598.31201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_TIC(Carbamidomethyl (C))GAMSSIKK_	CCNB3|p.T485Hfs*37|1|0.28|ENSG00000147082|chrX:50309615-50309616|-/C|frameshift_variant;ENSG00000147082|ENST00000376042|CCNB3	78.26377905018397	0.16684720679201295	1				NaN	NaN	0	NaN	2599	3382	5981
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5984	21.626	NaN	2578	30	0	266.26	0.106	+			24880	LKHLESFY	8	60	518.7769632551531	1035.539373577106	2	518.7771606445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LKHLESFY_	ENSG00000164610|ENST00000297157|RP9;ENST00000474370.1_1_7:33138787-33148984:-|nuORF	44.116797842482775	0.6307669463330267	1				NaN	NaN	0	NaN	2600	3382	5981
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5985	21.627	NaN	2193.4	30	0	404.76	0.106	+			44021	TPLHHTWTY	9	41	578.282585374149	NaN	0	578.2825317382812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TPLHHTWTY_	ENSG00000092108|ENST00000458591|SCFD1;ENST00000555259.5_1_14:31112578-31185169:+|nuORF;ENST00000556534.1_1_14:31109012-31122803:+|nuORF;nc|ENSG00000092108|Q8WVM8-2|SCFD1;nc|ENSG00000092108|Q8WVM8-3|SCFD1	21.9598887501803	0.3626577482100488	1				NaN	NaN	0	NaN	2601	3382	5981
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5986	21.629	NaN	3054.1	30	0	1456.3	0.106	+			8572	EAYGKPVKY	9	52	527.7825439178121	1053.550534902424	2	527.7824096679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EAYGKPVKY_	ENSG00000204385|ENST00000229729|SLC44A4;nc|ENSG00000204385|Q53GD3-4|SLC44A4;SLC44A4|p.F618Sfs*25|1|0.43|ENSG00000204385|chr6:31864889-31864889|A/-|frameshift_variant;SLC44A4|p.G398Afs*7|1|0.29|ENSG00000204385|chr6:31869197-31869197|G/-|frameshift_variant;SLC44A4|p.N144Kfs*55|2|0.31|ENSG00000204385|chr6:31874757-31874758|-/T|frameshift_variant;SLC44A4|p.S619Lfs*9|1|0.31|ENSG00000204385|chr6:31864888-31864889|-/A|frameshift_variant	116.90359126533652	0.02307425081617795	1				NaN	NaN	0	NaN	2602	3382	5981
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5987	21.631	NaN	1594.4	30	0	284.63	0.106				-1	RSCAQSRDPS	10	33	582.2640991210938	NaN	0	582.2640991210938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_RSC(Carbamidomethyl (C))AQSRDPS_	ENST00000539757.1_1_12:9459887-9464602:+|nuORF	23.52269567125451	0.42010282974921537	1				NaN	NaN	0	NaN	2603	3382	5981
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5988	21.633	NaN	1137.3	30	0	222.62	0.032	+			28721	NNLADAVI	8	37	415.22436106167106	828.4341691901421	2	415.2243957519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NNLADAVI_	CON__Q2KJ83	42.47446043378293	0.6409579893742323	1				NaN	NaN	0	NaN	2604	3382	5981
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5997	21.653	NaN	1163.7	30	0	315.06	0.214			+	46624	VGADASVLR	9	37	444.2508162691707	886.4870796051414	2	444.2506103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VGADASVLR_	REV__sp|F5H9F9|UL88_HCMVMProteinUL88OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL88PE=3SV=1;REV__sp|P16731|UL88_HCMVAProteinUL88OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL88PE=1SV=1	31.529811441608018	0.5085848003137583	1				NaN	NaN	0	NaN	2610	3385	5996
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5998	21.656	NaN	2145.5	30	0	237.97	0.106	+			39516	STFQPANKLNK	11	67	624.3410691784251	NaN	0	624.3404541015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STFQPANKLNK_	ENSG00000131503|ENST00000360839|ANKHD1;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	101.25262130126117	0.033852657862805675	1				NaN	NaN	0	NaN	2611	3385	5996
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	5999	21.658	NaN	1170.4	30	0	116.52	0.106	+			26341	LSYLAKNLG	9	51	489.78399658203125	NaN	0	489.78399658203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSYLAKNLG_	tr|U7T203|U7T203_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00417PE=4SV=1	32.81241826257853	0.3119040447479903	1				NaN	NaN	0	NaN	2612	3385	5996
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6000	21.66	NaN	2168.7	30	0	411.98	0.106			+	6955	CPLMLGRQL	9	45	515.7791429220417	1029.5437329108834	2	515.780029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_CPLMLGRQL_	REV__ENST00000315082.8_1_16:723515-723827:+|nuORF	40.5726180659479	0.4135428067754104	1				NaN	NaN	0	NaN	2613	3385	5996
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6001	21.662	NaN	1841.1	30	0	571.54	0.106				-1	SIKKLKDM	8	38	326.85870361328125	NaN	0	326.85870361328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_SIKKLKDM(Oxidation (M))_	nc|ENSG827|Q7LDI9|ERVK-6_gag	29.14955571784316	1.7418937515398478	1				NaN	NaN	0	NaN	2614	3385	5996
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6002	21.664	NaN	11240	30	0	7026.4	0.035	+			12416	GEALGLKQAV	10	48	329.19393558387986	984.5599773518396	3	329.1940612792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GEALGLKQAV_	ENSG00000263001|ENST00000573035|GTF2I;ENST00000544802.5_1_7:72593260-72619478:+|nuORF;nc|ENSG00000263001|P78347-2|GTF2I;nc|ENSG00000263001|P78347-3|GTF2I;nc|ENSG00000263001|P78347-4|GTF2I	27.882242232435846	0.6521336255503853	1				NaN	NaN	0	NaN	2615	3385	5996
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6012	21.687	NaN	14663	30	0	2021.7	0.214	+			32070	QSASPLLHGEK	11	89	583.8117243943354	1165.6088958554708	2	583.8123779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QSASPLLHGEK_	ENST00000550178.1_1_12:120933958-120934105:+|nuORF	82.49433358170734	0.13157841501534762	1				NaN	NaN	0	NaN	2622	3388	6011
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6013	21.691	NaN	3974.3	30	0	1635	0.106	+			29033	NSTRRHLF	8	49	344.18890446781717	NaN	0	344.1891174316406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NSTRRHLF_	ENSG00000147485|ENST00000356297|PXDNL;nc|ENSG00000147485|A1KZ92-2|PXDNL;PXDNL|p.T1359Qfs*25|1|0.33|ENSG00000147485|chr8:51339695-51339695|T/-|frameshift_variant	21.70233525837049	1.7418937515398478	1				NaN	NaN	0	NaN	2623	3388	6011
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6014	21.693	NaN	3427	30	0	464.1	0.106	+			19483	KATEHLSTL	9	64	500.2771090789539	998.5396652247078	2	500.277099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KATEHLSTL_	ENSG00000118137|ENST00000236850|APOA1	98.62937762414208	0.04060045538121712	1				NaN	NaN	0	NaN	2624	3388	6011
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6015	21.695	NaN	2911.3	30	0	345.65	0.106	+			36354	SESTNQRVL	9	60	517.26731446506	1032.52007599692	2	517.267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SESTNQRVL_	ENSG00000158604|ENST00000457408|TMED4;ENSG00000184840|ENST00000332598|TMED9;ENST00000507723.1_1_5:177021070-177022414:+|nuORF;ENST00000513799.5_1_5:177019550-177022414:+|nuORF;nc|ENSG00000158604|Q7Z7H5-2|TMED4	75.04331003522576	0.118981335847003	1				NaN	NaN	0	NaN	2625	3388	6011
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6016	21.696	NaN	1494.5	30	0	223.04	0.106			+	28806	NPIGAVTK	8	40	400.23727374188917	NaN	0	400.23724365234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NPIGAVTK_	REV__ENSG00000188352|ENST00000338382|FOCAD;REV__ENST00000603552.1_1_9:20881907-20885147:+|nuORF	42.396135135203025	1.7418937515398478	1				NaN	NaN	0	NaN	2626	3388	6011
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6017	21.698	NaN	2903.8	30	0	430.83	0.106	+			40891	SVFLGTHSK	9	58	488.26623840071704	974.5179238682341	2	488.26605224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVFLGTHSK_	ENSG00000119685|ENST00000298832|TTLL5;nc|ENSG00000119685|Q6EMB2-2|TTLL5	77.31757898189308	0.1091473830098891	1				NaN	NaN	0	NaN	2627	3388	6011
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6018	21.7	NaN	1294.7	30	0	109.94	0.034	+			7118	DAAKNQVAM	9	43	474.23394165052633	946.4533303678527	2	474.2340393066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DAAKNQVAM_	ENSG00000109971|ENST00000534624|HSPA8;ENSG00000126803|ENST00000247207|HSPA2;ENSG00000204390|ENST00000375654|HSPA1L;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000531063.1_1_11:122931759-122932032:-|nuORF;ENST00000532167.5_1_11:122930938-122932032:-|nuORF;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;ENST00000533238.5_1_11:122929516-122932032:-|nuORF;HSPA2|p.G138Afs*8|3|0.33|ENSG00000126803|chr14:64541257-64541257|G/-|frameshift_variant;HSPA8|p.K569Dfs*6|1|0.3|ENSG00000109971|chr11:123058302-123058303|TC/-|frameshift_variant;nc|ENSG00000109971|P11142-2|HSPA8	52.936696900407355	0.27249468807391813	1				NaN	NaN	0	NaN	2628	3388	6011
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6025	21.718	NaN	2607.4	30	0	285.84	0.214	+			41826	SVSTHLITK	9	59	493.28743019286316	984.5603074525263	2	493.2874450683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSTHLITK_	ENSG00000177873|ENST00000432264|ZNF619;ENST00000494154.6_1_3:40523704-40529729:+|nuORF;nc|ENSG00000177873|Q8N2I2-2|ZNF619;nc|ENSG00000177873|Q8N2I2-4|ZNF619;nc|ENSG00000177873|Q8N2I2|ZNF619	56.43379154798735	0.2433427591689151	1				NaN	NaN	0	NaN	2632	3391	6024
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6026	21.722	NaN	3753.8	30	0	2081.3	0.106	+			41485	SVPADLSRPK	10	50	535.3037838893698	1068.5930148455395	2	535.3043823242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVPADLSRPK_	ENSG00000047849|ENST00000683076|MAP4;MAP4|p.R919Gfs*14|1|0.44|ENSG00000047849|chr3:47870917-47870917|G/-|frameshift_variant;MAP4|p.T960Qfs*35|1|0.3|ENSG00000047849|chr3:47869309-47869309|T/-|frameshift_variant;MAP4|p.V999*|1|0.25|ENSG00000047849|chr3:47867318-47867318|T/-|frameshift_variant;nc|ENSG00000047849|P27816-2|MAP4;nc|ENSG00000047849|P27816-4|MAP4;nc|ENSG00000047849|P27816-5|MAP4;nc|ENSG00000047849|P27816-6|MAP4;nc|ENSG00000047849|P27816|MAP4	66.96192283764107	0.30252237217063654	1				NaN	NaN	0	NaN	2633	3391	6024
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6027	21.724	NaN	2369.5	30	0	398.37	0.106	+			24867	LKETCRRAQ	9	67	552.8035133530475	NaN	0	552.8011474609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LKETCRRAQ_	ADAMTSL2|p.H950Tfs*?|1|0.45|ENSG00000197859|chr9:133574850-133574850|C/-|frameshift_variant	66.96192283764107	0.11962625698446946	1				NaN	NaN	0	NaN	2634	3391	6024
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6028	21.725	NaN	1716.8	30	0	549.33	0.106			+	-1	PFAAWMNK	8	49	490.7376583403466	979.4607637474933	2	490.73699951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_PFAAWM(Oxidation (M))NK_	REV__ENSG00000180209|ENST00000322861|MYL11	21.70233525837049	0.7917639344264583	1				NaN	NaN	0	NaN	2635	3391	6024
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6029	21.727	NaN	1974	30	0	265.63	0.106				-1	VTARRRCCC	9	49	562.7649536132812	NaN	0	562.7649536132812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_VTARRRCC(Carbamidomethyl (C))C_	ENST00000308086.2_1_12:72057128-72057308:+|nuORF	32.81241826257853	0.3119040447479903	1				NaN	NaN	0	NaN	2636	3391	6024
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6030	21.729	NaN	2061	30	0	299.18	0.106			+	46159	VDTIGRFAK	9	54	503.78715472983976	NaN	0	503.78790283203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VDTIGRFAK_	REV__ENSG00000184347|ENST00000519560|SLIT3;REV__ENST00000518140.5_1_5:168199753-168727722:-|nuORF;REV__nc|ENSG00000184347|O75094-2|SLIT3;REV__nc|ENSG00000184347|O75094-3|SLIT3;REV__nc|ENSG00000184347|O75094-4|SLIT3;REV__SLIT3|p.P1113Hfs*108|1|0.38|ENSG00000184347|chr5:168685904-168685904|G/-|frameshift_variant	37.15910966729921	0.2899585034171616	1				NaN	NaN	0	NaN	2637	3391	6024
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6031	21.731	NaN	1000	30	0	141.59	0.035	+			7257	DALTVWILS	9	46	509.28314208984375	NaN	0	509.28314208984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DALTVWILS_	ENST00000436129.2_1_20:60551226-60583162:-|nuORF	35.61828744233558	0.29773779453147337	1				NaN	NaN	0	NaN	2638	3391	6024
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6038	21.749	NaN	7522.5	30	0	1099.7	0.214	+			4404	ATIDGSVNPK	10	70	501.2666550499944	1000.5187571667889	2	501.2663269042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATIDGSVNPK_	ENSG00000116830|ENST00000369466|TTF2;ENST00000463696.1_1_1:117637951-117640053:+|nuORF;ENST00000492682.5_1_1:117635418-117640830:+|nuORF;TTF2|p.K1134Efs*22|1|0.25|ENSG00000116830|chr1:117101426-117101427|-/A|frameshift_variant	81.52500206392136	0.18316182710238588	1				NaN	NaN	0	NaN	2642	3394	6037
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6039	21.752	NaN	4393.6	30	0	551.72	0.106	+			15369	GTVYFKEGK	9	68	514.7740646137088	1027.5335762942175	2	514.7742309570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTVYFKEGK_	ENSG00000004478|ENST00000001008|FKBP4	126.24258497203832	0.01742065577488747	1				NaN	NaN	0	NaN	2643	3394	6037
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6040	21.754	NaN	1354.5	30	0	285.9	0.038			+	-1	VGYIIAMSTYG	11	32	595.7904052734375	NaN	0	595.7904052734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_VGYIIAM(Oxidation (M))STYG_	REV__ENSG00000092931|ENST00000685175|MFSD11;REV__MFSD11|p.T184Dfs*13|1|0.36|ENSG00000092931|chr17:76744370-76744371|-/G|frameshift_variant;REV__nc|ENSG00000092931|O43934-2|MFSD11	20.94693142431847	0.456735970842152	1				NaN	NaN	0	NaN	2644	3394	6037
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6049	21.776	NaN	3242.7	30	0	503.76	0.214	+			46902	VISRAISVK	9	62	486.81340162365433	971.6122503141087	2	486.8133544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VISRAISVK_	ENST00000530759.1_1_11:76155338-76155506:-|nuORF	83.6470233535746	0.08277643980271215	1				NaN	NaN	0	NaN	2650	3397	6048
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6050	21.779	NaN	5603.5	30	0	1564.1	0.106				-1	 	0	45	384.77206107446415	767.5295692157283	2	384.7718811035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	2651	3397	6048
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6051	21.781	NaN	5908.5	30	0	954.71	0.106				-1	 	0	65	481.25830327866606	960.5020536241321	2	481.2580871582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	2652	3397	6048
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6052	21.783	NaN	6218.4	30	0	698.94	0.106	+			38593	SSGFVAIKK	9	66	468.77921995121716	935.5438869692343	2	468.77899169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSGFVAIKK_	ENSG00000198478|ENST00000369838|SH3BGRL2;SH3BGRL2|p.P55Rfs*41|2|0.28|ENSG00000198478|chr6:79673727-79673727|C/-|frameshift_variant	166.67852932204877	0.003333876602083393	1				NaN	NaN	0	NaN	2653	3397	6048
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6053	21.785	NaN	2414.5	30	0	384.24	0.106				-1	ATCGELLRH	9	54	528.7670031651716	NaN	0	528.7672119140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_ATC(Carbamidomethyl (C))GELLRH_	ENSG00000168434|ENST00000307149|COG7	72.87924865735499	0.09578366712754152	1				NaN	NaN	0	NaN	2654	3397	6048
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6054	21.787	NaN	12033	30	0	6118	0.106			+	46863	VIKSREIK	8	50	324.87805672708976	971.6123407814694	3	324.878173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VIKSREIK_	REV__ENSG00000156194|ENST00000286719|PPEF2;REV__nc|ENSG00000156194|O14830-2|PPEF2;REV__PPEF2|p.T315I|1|0.52|ENSG00000156194|chr4:75876663-75876663|G/A|missense_variant	38.80614096846853	0.6637206697844082	1				NaN	NaN	0	NaN	2655	3397	6048
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6055	21.789	NaN	1541.3	30	0	375.24	0.036			+	37850	SNMKMRGKL	9	46	532.7902416748562	1063.5659304165124	2	532.7904052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SNMKMRGKL_	REV__ENST00000303531.11_2_16:24196492-24196841:+|nuORF	32.81241826257853	0.4965981579233955	1				NaN	NaN	0	NaN	2656	3397	6048
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6063	21.807	NaN	6943.4	30	0	1014.6	0.214	+			4675	ATLSEARLK	9	67	494.7929066141257	987.5712602950514	2	494.79278564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATLSEARLK_	ENSG00000153815|ENST00000537098|CMIP;nc|ENSG00000153815|Q8IY22-2|CMIP;nc|ENSG00000153815|Q8IY22-3|CMIP	112.10723106719422	0.02684780151337622	1				NaN	NaN	0	NaN	2661	3400	6062
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6064	21.811	NaN	6234	30	0	791.83	0.106	+			5201	ATTSLSLRR	9	69	502.7960680328044	1003.5775831324088	2	502.7960205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATTSLSLRR_	ENSG00000204351|ENST00000375394|SKIC2;ENST00000465703.5_1_6:31926942-31928873:+|nuORF;ENST00000488648.5_1_6:31926942-31929152:+|nuORF;SKIV2L|p.E1164Gfs*8|1|0.22|ENSG00000204351|chr6:31969365-31969366|-/G|frameshift_variant;SKIV2L|p.E816Rfs*3|1|0.37|ENSG00000204351|chr6:31967104-31967104|G/-|frameshift_variant	85.86182877749512	0.07653218437724067	1				NaN	NaN	0	NaN	2662	3400	6062
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6065	21.813	NaN	8903.8	30	0	4255.5	0.106			+	42179	SYVLKKKNL	9	48	364.8972874694857	1091.6700330086571	3	364.8974304199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SYVLKKKNL_	REV__tr|U7ST90|U7ST90_FUSNUYkuDdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01333PE=4SV=1	34.172542307311794	0.4838870758800184	1				NaN	NaN	0	NaN	2663	3400	6062
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6066	21.814	NaN	3186.9	30	0	720.97	0.106	+			50550	YASTAKCL	8	54	457.22587635662484	912.4371997800497	2	457.2257385253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_YASTAKC(Carbamidomethyl (C))L_	ENSG00000142089|ENST00000399808|IFITM3;ENSG00000185201|ENST00000616316|IFITM2;ENSG00000185885|ENST00000408968|IFITM1;ENST00000505282.1_1_4:66959972-66960239:+|nuORF;ENST00000527146.1_2_11:308871-309162:+|nuORF	82.24051045832904	0.30490469762271794	1				NaN	NaN	0	NaN	2664	3400	6062
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6067	21.816	NaN	2125.3	30	0	252.05	0.106	+			51246	YQKIGKAL	8	59	460.78165137312357	NaN	0	460.78143310546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YQKIGKAL_	ENSG00000130340|ENST00000392185|SNX9	97.47269410471826	1.7418937515398478	1				NaN	NaN	0	NaN	2665	3400	6062
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6068	21.818	NaN	3088.9	30	0	596.22	0.106	+			2624	AQIIIPNPAA	10	42	336.5341244885029	1006.5805440657089	3	336.53424072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AQIIIPNPAA_	ENSG00000126603|ENST00000433375|GLIS2;GLIS2|p.G397Afs*127|2|0.49|ENSG00000126603|chr16:4337132-4337132|G/-|frameshift_variant	15.641811463095205	0.7369665665077569	1				NaN	NaN	0	NaN	2666	3400	6062
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6069	21.82	NaN	4372.2	30	0	962.77	0.037				-1	MNKISKKIQ	9	73	574.3288461905529	1146.6431394479057	2	574.32958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))M(Oxidation (M))NKISKKIQ_	ENST00000261844.11_2_15:52900811-52900880:-|nuORF	90.36981228632155	0.0638227155548745	1				NaN	NaN	0	NaN	2667	3400	6062
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6081	21.846	NaN	4078.7	30	0	993.85	0.215	+			15438	GTYSKIMNH	9	64	525.755412406048	1049.4962718788959	2	525.7555541992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTYSKIMNH_	ENSG00000067900|ENST00000399799|ROCK1;ROCK1|p.I1150Nfs*5|1|0.23|ENSG00000067900|chr18:20959903-20959904|-/T|frameshift_variant;ROCK1|p.K1307Nfs*3|1|0.28|ENSG00000067900|chr18:20953718-20953718|T/-|frameshift_variant;ROCK1|p.K818Efs*6|1|0.51|ENSG00000067900|chr18:20984387-20984388|TT/-|frameshift_variant;ROCK1|p.N871Kfs*14|1|0.07|ENSG00000067900|chr18:20979951-20979952|-/T|frameshift_variant;ROCK1|p.N871Tfs*5|1|0.29|ENSG00000067900|chr18:20979952-20979952|T/-|frameshift_variant;ROCK1|p.P1257Lfs*3|1|0.21|ENSG00000067900|chr18:20954866-20954866|G/-|frameshift_variant	75.04331003522576	0.118981335847003	1				NaN	NaN	0	NaN	2676	3403	6080
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6082	21.849	NaN	2678.5	30	0	871.64	0.106			+	32669	RACETRVKQ	9	62	574.3046437516014	1146.5947345700026	2	574.305908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_RAC(Carbamidomethyl (C))ETRVKQ_	REV__SP110|p.A338V|1|0.17|ENSG00000135899|chr2:230202614-230202614|G/A|missense_variant	52.936696900407355	0.27249468807391813	1				NaN	NaN	0	NaN	2677	3403	6080
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6083	21.851	NaN	3510.2	30	0	352.79	0.106	+			911	AEIEGLKGQRA	11	73	586.3254378618008	1170.6363227904014	2	586.3258056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEIEGLKGQRA_	CON__H-INV:HIT000292931;CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;ENST00000547031.5_1_12:53292389-53294972:-|nuORF;ENST00000562317.1_1_16:78082520-78083381:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	96.0336014099291	0.0740748020614995	1				NaN	NaN	0	NaN	2678	3403	6080
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6084	21.853	NaN	2410.4	30	0	269.04	0.106			+	-1	ALGDGLLTCL	10	57	516.7734276908285	1031.532302448457	2	516.7732543945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_ALGDGLLTC(Carbamidomethyl (C))L_	REV__ENSG00000100647|ENST00000342745|SUSD6;REV__ENST00000556993.1_1_14:70125309-70170323:+|nuORF;REV__SUSD6|p.L44Pfs*33|1|0.41|ENSG00000100647|chr14:69703398-69703399|-/C|frameshift_variant;REV__SUSD6|p.R58Gfs*7|1|0.22|ENSG00000100647|chr14:69703441-69703441|C/-|frameshift_variant	44.116797842482775	0.5112108506279902	1				NaN	NaN	0	NaN	2679	3403	6080
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6085	21.855	NaN	4887.3	30	0	2256	0.106			+	-1	SIIVYLFMGL	10	43	391.2192975914491	1170.6360633745473	3	391.2193908691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_SIIVYLFM(Oxidation (M))GL_	REV__ENST00000230461.10_1_6:75965058-75965136:-|nuORF	29.170058357718403	0.6416167986984785	1				NaN	NaN	0	NaN	2680	3403	6080
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6086	21.857	NaN	4726.3	30	0	507.96	0.106	+			1772	AICQWERNK	9	73	602.7980521164096	NaN	0	602.798583984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_AIC(Carbamidomethyl (C))QWERNK_	ENSG00000140526|ENST00000352732|ABHD2	136.26810882979174	0.0003037181779624456	1				NaN	NaN	0	NaN	2681	3403	6080
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6087	21.859	NaN	1437.8	30	0	159.79	0.035	+			21204	KLEKKENK	8	50	508.8086527651458	1015.6027525970916	2	508.8087463378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KLEKKENK_	tr|U7T3E8|U7T3E8_FUSNUriboflavinsynthaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00614PE=4SV=1	31.529811441608018	0.715883593221515	1				NaN	NaN	0	NaN	2682	3403	6080
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6099	21.884	NaN	11636	30	0	3273.2	0.214	+			7960	DSRALVLSL	9	55	325.19401402517525	972.5602126757258	3	325.1939697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DSRALVLSL_	VWCE|p.G829Efs*100|1|0.11|ENSG00000167992|chr11:61259057-61259058|-/ACCT|frameshift_variant	40.5726180659479	0.4135428067754104	1				NaN	NaN	0	NaN	2691	3406	6098
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6100	21.888	NaN	6739	30	0	653.35	0.106			+	9643	ELRVKESI	8	65	487.2871897956062	972.5598266580124	2	487.2872009277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ELRVKESI_	REV__ENSG00000144596|ENST00000621039|GRIP2;REV__GRIP2|p.L561Sfs*95|1|0.1|ENSG00000144596|chr3:14514395-14514395|G/-|frameshift_variant;REV__nc|ENSG00000144596|Q9C0E4-2|GRIP2	85.16082228582465	0.29211966821764696	1				NaN	NaN	0	NaN	2692	3406	6098
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6101	21.89	NaN	4104.9	30	0	814.22	0.106				-1	 	0	60	534.7822715656249	1067.5499901980497	2	535.7853393554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	2693	3406	6098
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6102	21.892	NaN	1453.3	30	0	195.56	0.106			+	25727	LRRLQAEV	8	59	492.8010969352535	983.587640937307	2	492.8009948730469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LRRLQAEV_	REV__ENSG00000101197|ENST00000217169|BIRC7;REV__nc|ENSG00000101197|Q96CA5-2|BIRC7	35.61828744233558	0.6843154725607303	1				NaN	NaN	0	NaN	2694	3406	6098
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6103	21.893	NaN	9582.6	30	0	4099.2	0.106	+			37920	SPEDIKKAY	9	47	350.8536408465824	1049.5390931399472	3	350.8535461425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SPEDIKKAY_	DNAJB6|p.R24W|1|0.27|ENSG00000105993|chr7:157363165-157363165|C/T|missense_variant;DNAJB7|p.A14V|1|0.08|ENSG00000172404|chr22:40861954-40861954|G/A|missense_variant;DNAJB8|p.R24H|1|0.38|ENSG00000179407|chr3:128463175-128463175|C/T|missense_variant;ENSG00000105993|ENST00000262177|DNAJB6;ENSG00000172404|ENST00000307221|DNAJB7;ENSG00000179407|ENST00000319153|DNAJB8;ENST00000488001.5_1_7:157151266-157161444:+|nuORF;ENST00000526843.2_1_11:127810983-127811547:-|nuORF;nc|ENSG00000105993|O75190-2|DNAJB6;nc|ENSG00000105993|O75190-3|DNAJB6	42.86426827375447	0.38666266728046506	1				NaN	NaN	0	NaN	2695	3406	6098
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6104	21.895	NaN	2072.7	30	0	199.4	0.035	+			3630	ASVYQPLKK	9	62	517.305593051139	1032.596633169078	2	517.3055419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASVYQPLKK_	ENSG00000204178|ENST00000374343|MACO1;nc|ENSG00000204178|Q8N5G2-2|MACO1;nc|ENSG00000204178|Q8N5G2-3|MACO1	63.42647028704847	0.1850514934184437	1				NaN	NaN	0	NaN	2696	3406	6098
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6105	21.896	NaN	1709.8	30	0	331.11	0.143	+			48283	VTDPSIPIRKK	11	39	627.3823575768392	NaN	0	627.3823852539062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VTDPSIPIRKK_	ELF4|p.A554Pfs*13|1|0.32|ENSG00000102034|chrX:130067053-130067053|C/-|frameshift_variant;ELF4|p.Q341Rfs*30|2|0.25|ENSG00000102034|chrX:130069466-130069466|G/-|frameshift_variant;ENSG00000102034|ENST00000308167|ELF4	41.1089822145965	0.37917734110163537	1				NaN	NaN	0	NaN	2697	3406	6098
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6115	21.919	NaN	5076.3	30	0	444.26	0.214	+			37921	SPEDIKKAY	9	65	525.7769831746883	1049.5394134161766	2	525.7772827148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SPEDIKKAY_	DNAJB6|p.R24W|1|0.27|ENSG00000105993|chr7:157363165-157363165|C/T|missense_variant;DNAJB7|p.A14V|1|0.08|ENSG00000172404|chr22:40861954-40861954|G/A|missense_variant;DNAJB8|p.R24H|1|0.38|ENSG00000179407|chr3:128463175-128463175|C/T|missense_variant;ENSG00000105993|ENST00000262177|DNAJB6;ENSG00000172404|ENST00000307221|DNAJB7;ENSG00000179407|ENST00000319153|DNAJB8;ENST00000488001.5_1_7:157151266-157161444:+|nuORF;ENST00000526843.2_1_11:127810983-127811547:-|nuORF;nc|ENSG00000105993|O75190-2|DNAJB6;nc|ENSG00000105993|O75190-3|DNAJB6	123.20810148215591	0.019257656778428764	1				NaN	NaN	0	NaN	2704	3409	6114
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6116	21.923	NaN	2112.7	30	0	266.73	0.106	+			18573	ISPHGNAL	8	47	404.71915230628093	807.4237516793619	2	404.7190856933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ISPHGNAL_	ENSG00000166855|ENST00000300107|CLPX;ENST00000558103.1_1_15:65450907-65451087:-|nuORF;ENST00000558958.1_1_15:65449172-65477491:-|nuORF	94.00642277110589	0.2653416297186628	1				NaN	NaN	0	NaN	2705	3409	6114
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6117	21.925	NaN	1760.3	30	0	235.83	0.106	+			19515	KAVLAATSKF	10	53	518.3134254561934	1034.6122979791867	2	518.3137817382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KAVLAATSKF_	ENSG00000125812|ENST00000338121|GZF1;GZF1|p.H395Qfs*22|1|0.19|ENSG00000125812|chr20:23365568-23365568|C/-|frameshift_variant;GZF1|p.P462Tfs*5|1|0.18|ENSG00000125812|chr20:23367016-23367017|-/A|frameshift_variant	54.776311868738084	0.41334902933431344	1				NaN	NaN	0	NaN	2706	3409	6114
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6118	21.927	NaN	3506.2	30	0	470.94	0.106	+			26770	LVQKAILQK	9	68	520.8449591863384	1039.6753654394768	2	520.84521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LVQKAILQK_	ENSG00000116731|ENST00000311066|PRDM2;nc|ENSG00000116731|Q13029-2|PRDM2;nc|ENSG00000116731|Q13029-3|PRDM2;nc|ENSG00000116731|Q13029-5|PRDM2;PRDM2|p.P1648Qfs*14|1|0.24|ENSG00000116731|chr1:13782731-13782731|G/-|frameshift_variant	87.75429964447693	0.0711966946989736	1				NaN	NaN	0	NaN	2707	3409	6114
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6119	21.929	NaN	1158.9	30	0	419.02	0.106	+			24629	LGSLSATSQQ	10	39	496.2562634371657	990.4979739411315	2	497.2895812988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LGSLSATSQQ_	ENSG00000135631|ENST00000486777|RAB11FIP5	25.125986553469783	0.6746423231557295	1				NaN	NaN	0	NaN	2708	3409	6114
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6120	21.93	NaN	1687.9	30	0	247.82	0.106	+			28542	NINPPPPYPG	10	48	533.2704467773438	NaN	0	533.2704467773438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NINPPPPYPG_	TULP4|p.K830N|1|0.23|ENSG00000130338|chr6:158502153-158502153|G/C|missense_variant	21.9598887501803	0.4201028297492154	1				NaN	NaN	0	NaN	2709	3409	6114
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6121	21.932	NaN	1919.4	30	0	264.29	0.037			+	-1	YRCGAVLRGS	10	54	569.7920663518398	NaN	0	569.7916259765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_YRC(Carbamidomethyl (C))GAVLRGS_	REV__ENST00000371926.7_1_10:90640020-90661418:+|nuORF;REV__ENST00000461650.1_1_10:90640020-90642233:+|nuORF	31.529811441608018	0.39664753963064203	1				NaN	NaN	0	NaN	2710	3409	6114
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6133	21.958	NaN	6827.3	30	0	1154.6	0.214	+			45098	TVILPIKKK	9	65	520.3654110795989	1038.7162692259976	2	520.3655395507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVILPIKKK_	ENSG00000138138|ENST00000680024|ATAD1;nc|ENSG00000138138|Q8NBU5-2|ATAD1	98.58198989935565	0.04066992115528678	1				NaN	NaN	0	NaN	2719	3412	6132
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6134	21.962	NaN	6129.2	30	0	1861.4	0.106				-1	 	0	59	490.28750500365146	978.5604570741029	2	490.2874450683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	2720	3412	6132
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6135	21.964	NaN	15810	30	0	7196.5	0.106			+	37474	SLKIKLPKL	9	62	347.2459391342212	1038.7159880028637	3	347.2459716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLKIKLPKL_	REV__ENSG00000126464|ENST00000418929|PRR12;REV__nc|ENSG00000126464|Q9ULL5-2|PRR12;REV__PRR12|p.P506Lfs*44|1|0.33|ENSG00000126464|chr19:49599569-49599569|C/-|frameshift_variant	37.81151784470057	0.4459294069877048	1				NaN	NaN	0	NaN	2721	3412	6132
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6136	21.966	NaN	7344.8	30	0	974.45	0.106	+			12938	GESSGKNVTL	10	62	496.2562634371657	990.4979739411315	2	496.2561340332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GESSGKNVTL_	ENSG00000174444|ENST00000307961|RPL4;ENST00000561554.5_1_15:66795666-66797161:-|nuORF;ENST00000561775.5_1_15:66795189-66797161:-|nuORF;ENST00000564439.5_1_15:66793756-66797161:-|nuORF;ENST00000566039.5_1_15:66793707-66797161:-|nuORF;ENST00000566622.5_1_15:66794044-66797161:-|nuORF;ENST00000566624.5_1_15:66794944-66797161:-|nuORF;ENST00000567229.5_1_15:66795359-66797161:-|nuORF	133.7523857240709	0.012419833933541829	1				NaN	NaN	0	NaN	2722	3412	6132
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6137	21.967	NaN	4466.5	30	0	1005.2	0.106				-1	 	0	47	420.3074102877913	838.6002676423826	2	420.3072814941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	2723	3412	6132
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6138	21.969	NaN	1882.5	30	0	186.17	0.106	+			35865	SEDPNQAKL	9	57	501.2483899850897	1000.4822270369795	2	501.2484130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SEDPNQAKL_	ENSG00000141279|ENST00000322157|NPEPPS;ENST00000530514.5_1_17:45668242-45699283:+|nuORF;ENST00000534807.1_1_17:45673771-45679230:+|nuORF;nc|ENSG00000141279|P55786-2|NPEPPS	77.31757898189308	0.1091473830098891	1				NaN	NaN	0	NaN	2724	3412	6132
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6139	21.971	NaN	2101.2	30	0	285.21	0.036				-1	CVTCHLRK	8	45	339.5099379968158	1015.5079845906473	3	339.510009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_CVTC(Carbamidomethyl (C))HLRK_	ENSG00000078098|ENST00000188790|FAP;ENST00000465088.1_1_2:163055261-163059383:-|nuORF	23.04248740728303	0.7814162927298575	1				NaN	NaN	0	NaN	2725	3412	6132
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6150	21.995	NaN	11454	30	0	3510.2	0.214	+			32022	QRMGLKKQE	9	68	559.3108554692532	1116.6071580053062	2	559.3118896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QRMGLKKQE_	ENST00000495715.1_1_10:3111490-3111553:+|nuORF	65.46538089061403	0.16805504838372562	1				NaN	NaN	0	NaN	2733	3415	6149
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6151	21.998	NaN	4436.4	30	0	945.06	0.106				-1	 	0	58	486.3157444701875	970.616936007175	2	486.316162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	2734	3415	6149
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6152	22	NaN	2426.7	30	0	539.34	0.106	+			19272	KAFNQGKIFK	10	53	590.8454612977233	1179.6763696622465	2	590.8453369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KAFNQGKIFK_	ENSG00000254772|ENST00000329251|EEF1G;ENST00000526409.5_1_11:62327153-62342310:-|nuORF;nc|ENSG00000254772|P26641-2|EEF1G;NCEH1-EEF1G|1|fusion	82.24051045832904	0.17731618517892733	1				NaN	NaN	0	NaN	2735	3415	6149
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6153	22.002	NaN	2231.3	30	0	355.51	0.037	+			24242	LETEYQLKK	9	55	576.3192255151882	1150.6238980971764	2	576.3187866210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LETEYQLKK_	tr|U7SM12|U7SM12_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02012PE=4SV=1	49.44154591367651	0.3095138337212152	1				NaN	NaN	0	NaN	2736	3415	6149
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6164	22.028	NaN	35146	30	0	8319.2	0.214	+			4314	ATGKRFYFK	9	74	373.20977241044994	1116.6074878315499	3	373.2098083496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATGKRFYFK_	CLCA1|p.N76_V77insLLF|1|0.06|ENSG00000016490|chr1:86473481-86473482|-/CTTGTTATT|inframe_insertion;CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	42.396135135203025	0.392153681582562	1				NaN	NaN	0	NaN	2744	3418	6163
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6165	22.031	NaN	4325.1	30	0	2576.6	0.106			+	11517	FPDNKQVIK	9	56	544.8084125732274	1087.6022722132548	2	544.8088989257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FPDNKQVIK_	REV__ARID1A|p.F2141Sfs*59|5|0.26|ENSG00000117713|chr1:26780313-26780313|C/-|frameshift_variant;REV__ARID1A|p.P2114Rfs*21|1|0.46|ENSG00000117713|chr1:26780236-26780236|C/-|frameshift_variant;REV__ARID1A|p.V2244Gfs*34|1|0.31|ENSG00000117713|chr1:26780626-26780627|-/G|frameshift_variant;REV__ENSG00000117713|ENST00000324856|ARID1A;REV__nc|ENSG00000117713|O14497-2|ARID1A;REV__nc|ENSG00000117713|O14497-3|ARID1A	35.15202426646627	0.4747332964206883	1				NaN	NaN	0	NaN	2745	3418	6163
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6166	22.033	NaN	2693.9	30	0	388.71	0.106			+	43140	TESKQTLNI	9	55	517.2798024330044	1032.5450519328087	2	517.2799682617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TESKQTLNI_	REV__ENSG00000168676|ENST00000304372|KCTD19;REV__KCTD19|p.V768Rfs*12|1|0.33|ENSG00000168676|chr16:67291754-67291755|-/G|frameshift_variant;REV__KCTD19|p.V768Wfs*38|2|0.36|ENSG00000168676|chr16:67291755-67291755|G/-|frameshift_variant	69.6276240434122	0.14239879520340665	1				NaN	NaN	0	NaN	2746	3418	6163
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6167	22.035	NaN	4408.4	30	0	630.38	0.106	+			35228	SALEEYTKK	9	63	534.7822715656249	1067.5499901980497	2	534.7823486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SALEEYTKK_	ENSG00000118137|ENST00000236850|APOA1	101.25262130126117	0.03792372629710479	1				NaN	NaN	0	NaN	2747	3418	6163
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6168	22.037	NaN	1904	30	0	197.5	0.106			+	49	AAAPKAKH	8	43	397.2376152527763	792.4606775723527	2	397.2376708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AAAPKAKH_	REV__ENST00000497543.5_1_3:75471615-75471942:-|nuORF	26.79610172149135	0.7524337208463756	1				NaN	NaN	0	NaN	2748	3418	6163
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6169	22.039	NaN	2538.7	30	0	949.44	0.106	+			15247	GTTAVLTEK	9	47	460.2584330240178	918.5023131148356	2	460.2584228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTTAVLTEK_	ENSG00000136930|ENST00000259457|PSMB7	35.15202426646627	0.4747332964206883	1				NaN	NaN	0	NaN	2749	3418	6163
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6170	22.041	NaN	1310.7	30	0	206.93	0.036	+			43426	TGKPLSRCGK	10	33	349.5308054514324	1045.5705869544972	3	349.5309753417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TGKPLSRCGK_	ENSG00000100038|ENST00000357179|TOP3B;ENST00000444502.5_1_22:22312780-22313668:-|nuORF;ENST00000457179.5_1_22:22311488-22316996:-|nuORF;nc|ENSG00000100038|O95985-2|TOP3B;nc|ENSG00000100038|O95985-3|TOP3B	20.83715455343099	0.7096666582730032	1				NaN	NaN	0	NaN	2750	3418	6163
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6182	22.067	NaN	7485.7	30	0	1974.6	0.214	+			14361	GTADVHFER	9	60	516.2488355453751	1030.48311815755	2	516.2490844726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTADVHFER_	ENSG00000183684|ENST00000505490|ALYREF;ENST00000512673.1_1_17:79846815-79848630:-|nuORF;nc|ENSG00000183684|Q86V81|ALYREF	122.93914200107957	0.019420478173996256	1				NaN	NaN	0	NaN	2759	3421	6181
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6183	22.07	NaN	3058.5	30	0	344.37	0.106	+			39011	SSSGFVAIKK	10	64	512.2953301777409	1022.5761074222818	2	512.2957763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSSGFVAIKK_	ENSG00000198478|ENST00000369838|SH3BGRL2;SH3BGRL2|p.P55Rfs*41|2|0.28|ENSG00000198478|chr6:79673727-79673727|C/-|frameshift_variant	104.42354056486148	0.06456012287859861	1				NaN	NaN	0	NaN	2760	3421	6181
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6184	22.072	NaN	1652.7	30	0	264.95	0.106			+	23731	LAWAASAK	8	47	409.23203452328653	816.4495161133731	2	409.2317810058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LAWAASAK_	REV__ENSG00000169126|ENST00000305242|ODAD2;REV__nc|ENSG00000169126|Q5T2S8-2|ODAD2	51.33545320467046	0.5859736979383976	1				NaN	NaN	0	NaN	2761	3421	6181
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6185	22.074	NaN	7463.9	30	0	2746.7	0.106			+	2917	ASCLGRRR	8	59	325.84671955504984	974.5183292653496	3	325.8468017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_ASC(Carbamidomethyl (C))LGRRR_	REV__ENST00000275605.7_1_7:56119039-56119264:-|nuORF	45.9519527083369	0.6193794311207887	1				NaN	NaN	0	NaN	2762	3421	6181
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6186	22.076	NaN	1794.3	30	0	466.87	0.106	+			6362	AVTTVVNPK	9	49	464.7765673736598	927.5385818141197	2	464.77618408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVTTVVNPK_	ENSG00000150093|ENST00000302278|ITGB1	54.776311868738084	0.25715957988447635	1				NaN	NaN	0	NaN	2763	3421	6181
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6187	22.078	NaN	3126.4	30	0	617.57	0.106				-1	GTLMWHQMK	9	53	582.2704285466327	1162.5263041600654	2	582.2710571289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Oxidation (M)	_GTLM(Oxidation (M))WHQM(Oxidation (M))K_	ENST00000346169.6_1_3:184032401-184033585:+|nuORF;ENST00000352767.7_2_3:184032446-184033585:+|nuORF	31.529811441608018	0.5085848003137583	1				NaN	NaN	0	NaN	2764	3421	6181
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6188	22.079	NaN	1271.2	30	0	116.85	0.034			+	46871	VILKVKDK	8	46	471.8206944644493	NaN	0	471.821044921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VILKVKDK_	REV__tr|U7T2R6|U7T2R6_FUSNURNA-bindingS4domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00433PE=4SV=1	31.954861631926434	1.7418937515398478	1				NaN	NaN	0	NaN	2765	3421	6181
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6197	22.101	NaN	41454	30	0	18306	0.214				-1	 	0	68	344.5014900751501	1030.4826408256504	3	344.5015563964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	2771	3424	6196
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6198	22.105	NaN	13563	30	0	1639.8	0.106	+			28842	NPTLHFGNN	9	75	338.497981659412	1012.472115578436	3	338.49798583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NPTLHFGNN_	ENSG00000149054|ENST00000278319|ZNF215	33.921630207806714	0.48623198279849766	1				NaN	NaN	0	NaN	2772	3424	6196
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6199	22.107	NaN	3857.1	30	0	1394.8	0.106			+	50108	WGSAPAER	8	51	437.21425203226926	872.4139511313385	2	437.2141418457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_WGSAPAER_	REV__ENSG00000137822|ENST00000564079|TUBGCP4;REV__ENST00000562053.1_1_15:43689449-43690378:+|nuORF;REV__ENST00000563963.1_1_15:43687726-43694213:+|nuORF;REV__nc|ENSG00000137822|Q9UGJ1|TUBGCP4	42.396135135203025	0.6414440140393314	1				NaN	NaN	0	NaN	2773	3424	6196
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6200	22.108	NaN	7400.4	30	0	1268.4	0.106	+			3689	ATAAAIGATPR	11	77	500.2823949968522	998.5502370605044	2	500.28240966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATAAAIGATPR_	ENSG00000137497|ENST00000393695|NUMA1;ENST00000540626.5_1_11:71714575-71718510:-|nuORF;nc|ENSG00000137497|Q14980-2|NUMA1;nc|ENSG00000137497|Q14980-5|NUMA1	102.0615471778698	0.05642515548841253	1				NaN	NaN	0	NaN	2774	3424	6196
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6201	22.11	NaN	2310.8	30	0	302.63	0.106	+			26313	LSVSENHI	8	54	449.73489753685686	897.4552421405137	2	449.73504638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSVSENHI_	ENSG00000066032|ENST00000402739|CTNNA2;nc|ENSG00000066032|P26232-2|CTNNA2;nc|ENSG00000066032|P26232-3|CTNNA2;nc|ENSG00000066032|P26232-4|CTNNA2;nc|ENSG00000066032|P26232-5|CTNNA2;nc|ENSG00000066032|P26232-6|CTNNA2	76.84663266511073	0.3498490246073164	1				NaN	NaN	0	NaN	2775	3424	6196
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6202	22.112	NaN	3862.4	30	0	599.18	0.106	+			1748	AIAEAMKVK	9	69	480.7806718055908	959.5467906779817	2	480.7807922363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AIAEAMKVK_	DACH1|p.R518Gfs*25|1|0.29|ENSG00000276644|chr13:71557042-71557042|T/-|frameshift_variant;DACH1|p.T596Nfs*2|1|0.28|ENSG00000276644|chr13:71479252-71479253|-/T|frameshift_variant;ENSG00000276644|ENST00000613252|DACH1;nc|ENSG00000276644|Q9UI36-3|DACH1;nc|ENSG00000276644|Q9UI36|DACH1	75.04331003522576	0.118981335847003	1				NaN	NaN	0	NaN	2776	3424	6196
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6203	22.114	NaN	1628.2	30	0	229.39	0.032	+			7366	DDLGAAHL	8	40	406.20080333293134	810.3870537326627	2	406.20111083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DDLGAAHL_	ENST00000519583.5_1_5:178044267-178044471:-|nuORF;ENST00000520878.5_1_5:178030620-178044471:-|nuORF	39.021493756699265	0.6623843612266921	1				NaN	NaN	0	NaN	2777	3424	6196
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6210	22.132	NaN	22953	30	0	8153.6	0.214				-1	 	0	63	384.77206107446415	767.5295692157283	2	384.77197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	2781	3427	6209
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6211	22.135	NaN	2860.7	30	0	1026.1	0.106			+	-1	SSMAGCITTQ	10	36	528.2281494140625	NaN	0	528.2281494140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SSMAGC(Carbamidomethyl (C))ITTQ_	REV__CCNB3|p.T485Hfs*37|1|0.28|ENSG00000147082|chrX:50309615-50309616|-/C|frameshift_variant;REV__ENSG00000147082|ENST00000376042|CCNB3	25.57405402267927	0.4162033004763879	1				NaN	NaN	0	NaN	2782	3427	6209
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6212	22.137	NaN	5307.3	30	0	1418.8	0.106				-1	 	0	65	601.2999977861421	600.292721319542	1	601.3032836914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	2783	3427	6209
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6213	22.139	NaN	2954.9	30	0	460.83	0.106			+	41884	SVTNLVTLK	9	51	325.5340546001274	NaN	0	325.53411865234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVTNLVTLK_	REV__SH3GL1|p.M70V|1|0.12|ENSG00000141985|chr19:4365605-4365605|T/C|missense_variant	27.882242232435846	0.3367954786602879	1				NaN	NaN	0	NaN	2784	3427	6209
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6214	22.141	NaN	2120.3	30	0	461.65	0.106			+	23178	KWLSRTSCL	9	49	547.2963639694912	NaN	0	547.2965698242188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KWLSRTSCL_	REV__PPAT|p.K178Nfs*35|1|0.04|ENSG00000128059|chr4:56403157-56403167|TGGGTGCTTCC/-|frameshift_variant	31.529811441608018	0.3183796599642538	1				NaN	NaN	0	NaN	2785	3427	6209
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6215	22.143	NaN	1328.5	30	0	203.48	0.106	+			44951	TVAVAMGK	8	41	388.72043039819744	775.4263078631949	2	388.7206726074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TVAVAMGK_	ENSG00000100726|ENST00000262319|TELO2;ENST00000568240.1_1_16:1556929-1559934:+|nuORF	38.80614096846853	0.6637206697844082	1				NaN	NaN	0	NaN	2786	3427	6209
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6216	22.145	NaN	1512.9	30	0	596.66	0.034	+			27539	MPARTLAW	8	41	473.25342506033616	944.4922971874723	2	473.2535095214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MPARTLAW_	ENST00000540626.5_1_11:71714289-71714445:-|nuORF	26.79610172149135	0.7524337208463756	1				NaN	NaN	0	NaN	2787	3427	6209
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6227	22.17	NaN	1946	30	0	403.49	0.214	+			13194	GIASSSIAAK	10	49	452.7581110759472	NaN	0	452.7581787109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GIASSSIAAK_	ENSG00000165949|ENST00000612813|IFI27;nc|ENSG00000165949|P40305-1|IFI27;nc|ENSG00000165949|P40305-3|IFI27;nc|ENSG00000165949|P40305-4|IFI27	67.49366992349736	0.17308373824428946	1				NaN	NaN	0	NaN	2795	3430	6226
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6228	22.173	NaN	1569.4	30	0	188.56	0.106	+			34164	RTATIMIQK	9	48	531.31095531393	NaN	0	531.3114013671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RTATIMIQK_	ENSG00000167306|ENST00000285039|MYO5B	53.08895987439943	0.18540527177656715	1				NaN	NaN	0	NaN	2796	3430	6226
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6229	22.175	NaN	1212.7	30	0	76.133	0.106	+			50055	WEVYVCSQHSP	11	43	667.7947145154131	1333.5748760976262	2	667.7943115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_WEVYVCSQHSP_	ENSG00000112159|ENST00000369393|MDN1;MDN1|p.E2692*|2|0.32|ENSG00000112159|chr6:89706133-89706134|-/A|frameshift_variant;MDN1|p.F2691Lfs*7|2|0.37|ENSG00000112159|chr6:89706134-89706134|A/-|frameshift_variant;MDN1|p.K2642Nfs*17|2|0.29|ENSG00000112159|chr6:89707449-89707449|T/-|frameshift_variant;MDN1|p.L4077Cfs*15|1|0.16|ENSG00000112159|chr6:89680625-89680625|G/-|frameshift_variant;MDN1|p.L5278Ffs*6|1|0.18|ENSG00000112159|chr6:89652273-89652274|-/A|frameshift_variant	28.081489160057373	0.6952392775027776	1				NaN	NaN	0	NaN	2797	3430	6226
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6230	22.177	NaN	1507.5	30	0	291.5	0.036	+			44991	TVDGRVVEPK	10	44	550.308541643623	1098.602530354046	2	550.310302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TVDGRVVEPK_	ENST00000441603.1_1_11:5593122-5593311:-|nuORF	52.167168403610894	0.437078873413402	1				NaN	NaN	0	NaN	2798	3430	6226
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6237	22.195	NaN	2060.7	30	0	166.39	0.214			+	37394	SLGAKRFITA	10	65	532.3167856844418	1062.6190184356835	2	532.3162231445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLGAKRFITA_	REV__ENST00000372814.7_2_9:131218363-131231529:+|nuORF;REV__ENST00000446274.5_1_9:131219641-131231529:+|nuORF;REV__ENST00000546203.5_1_9:131218777-131231529:+|nuORF;REV__ENST00000604420.5_2_9:131219620-131231529:+|nuORF;REV__ODF2|p.I91Afs*18|1|0.04|ENSG00000136811|chr9:128469203-128469204|-/GCTT|frameshift_variant	72.2432373244024	0.2589930451692646	1				NaN	NaN	0	NaN	2802	3433	6236
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6238	22.198	NaN	2198.5	30	0	307.62	0.106	+			33153	RESTGAQVQV	10	56	537.7805725638312	1073.5465921944624	2	537.781005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RESTGAQVQV_	ENSG00000169564|ENST00000303577|PCBP1;ENSG00000183570|ENST00000681687|PCBP3;ENSG00000197111|ENST00000546463|PCBP2;ENST00000468429.5_1_21:47321003-47359956:+|nuORF;ENST00000547717.1_1_12:53848575-53861193:+|nuORF;nc|ENSG00000183570|P57721-2|PCBP3;nc|ENSG00000183570|P57721-3|PCBP3;nc|ENSG00000183570|P57721-4|PCBP3;nc|ENSG00000183570|P57721-5|PCBP3;nc|ENSG00000197111|Q15366-2|PCBP2;nc|ENSG00000197111|Q15366-4|PCBP2;nc|ENSG00000197111|Q15366-5|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;nc|ENSG00000197111|Q15366-7|PCBP2;nc|ENSG00000197111|Q15366-8|PCBP2;nc|ENSG00000197111|Q15366|PCBP2;PCBP2|p.T202Kfs*26|1|0.32|ENSG00000197111|chr12:53464773-53464773|C/-|frameshift_variant	38.753607047826485	0.5606299674732264	1				NaN	NaN	0	NaN	2803	3433	6236
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6239	22.2	NaN	1886.1	30	0	151.23	0.036	+			45238	TVQEHLIEK	9	55	548.8031634138965	1095.591773894593	2	548.8037719726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVQEHLIEK_	ENSG00000082898|ENST00000401558|XPO1;ENST00000428210.5_1_2:61705957-61719950:-|nuORF	81.52500206392136	0.09095445986635249	1				NaN	NaN	0	NaN	2804	3433	6236
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6246	22.218	NaN	2197.3	30	0	462.51	0.214	+			38334	SRIDLDEL	8	53	480.75320589611994	959.4918588590399	2	480.7530517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SRIDLDEL_	ENSG00000113391|ENST00000395965|FAM172A;ENST00000502503.1_1_5:93300208-93410459:-|nuORF;ENST00000504768.2_1_5:93246475-93410459:-|nuORF;ENST00000506398.6_1_5:93217085-93410459:-|nuORF;FAM172A|p.V310Afs*9|1|0.04|ENSG00000113391|chr5:93784477-93784478|-/GTGCTGAGATGAATGGGTGTGAG|frameshift_variant;nc|ENSG00000113391|Q8WUF8-2|ARB2A	74.25504064058377	0.37144338840759816	1				NaN	NaN	0	NaN	2808	3436	6245
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6247	22.222	NaN	2210.9	30	0	239.38	0.106			+	37580	SLNLTKVKP	9	60	500.3133974891277	NaN	0	500.3131103515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLNLTKVKP_	REV__ENSG00000269405|ENST00000625106|NXF2;REV__ENSG00000269437|ENST00000602195|NXF2B;REV__nc|ENSG00000290798|Q9H1B4-2|NXF5;REV__nc|ENSG00000290798|Q9H1B4-4|NXF5;REV__nc|ENSG00000290798|Q9H1B4-5|NXF5;REV__nc|ENSG00000290798|Q9H1B4-6|NXF5;REV__nc|ENSG00000290798|Q9H1B4|NXF5	58.22992032128504	0.15686832049467786	1				NaN	NaN	0	NaN	2809	3436	6245
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6248	22.224	NaN	3931.8	30	0	725.27	0.106				-1	SVVLGKMRT	9	45	336.1940354107343	NaN	0	336.5343933105469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_SVVLGKM(Oxidation (M))RT_	tr|U7T235|U7T235_FUSNUYidE/YbjLduplicationdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00532PE=3SV=1	31.529811441608018	0.3183796599642538	1				NaN	NaN	0	NaN	2810	3436	6245
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6249	22.226	NaN	1935.5	30	0	455.13	0.106	+			45670	VAAAESHPL	9	49	447.7374536066288	893.4603542800576	2	447.7372741699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VAAAESHPL_	ENST00000416120.1_1_6:64259201-64259360:-|nuORF;ENST00000489392.1_1_9:136216448-136216496:+|nuORF	82.30502934623384	0.08758161712619916	1				NaN	NaN	0	NaN	2811	3436	6245
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6250	22.228	NaN	980.93	30	0	133.7	0.106	+			12697	GEKKLLVKV	9	43	507.3394676753286	NaN	0	507.33966064453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GEKKLLVKV_	ENSG00000119707|ENST00000261973|RBM25;ENST00000528081.5_1_14:73544165-73555113:+|nuORF;nc|ENSG00000119707|P49756-2|RBM25;nc|ENSG00000119707|P49756-3|RBM25	20.94693142431847	0.3660861156085067	1				NaN	NaN	0	NaN	2812	3436	6245
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6251	22.229	NaN	1338.8	30	0	444.31	0.106			+	27912	MTVGFIDYGQ	10	33	565.76123046875	NaN	0	565.76123046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MTVGFIDYGQ_	REV__tr|U7STA9|U7STA9_FUSNUtRNA-specific2-thiouridylaseMnmAOS=FusobacteriumnucleatumCTI-5OX=1316586GN=mnmAPE=3SV=1	19.1035232394073	0.4201028297492154	1				NaN	NaN	0	NaN	2813	3436	6245
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6252	22.231	NaN	1173.8	30	0	156.15	0.035				-1	AMLYLPLIG	9	47	503.787312660482	NaN	0	503.7873229980469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_AM(Oxidation (M))LYLPLIG_	DOCK7|p.F1836Dfs*12|1|0.05|ENSG00000116641|chr1:62477795-62477796|-/TGTC|frameshift_variant;ENSG00000116641|ENST00000635253|DOCK7;nc|ENSG00000116641|Q96N67-2|DOCK7;nc|ENSG00000116641|Q96N67-3|DOCK7;nc|ENSG00000116641|Q96N67-4|DOCK7;nc|ENSG00000116641|Q96N67-5|DOCK7;nc|ENSG00000116641|Q96N67-6|DOCK7	29.841539824830324	0.32690339240668626	1				NaN	NaN	0	NaN	2814	3436	6245
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6263	22.255	NaN	1744.9	30	0	316.28	0.214			+	17354	IALALDAPR	9	49	470.2845861848725	938.5546194365451	2	470.28466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IALALDAPR_	REV__TM6SF2|p.V222A|1|0.4|ENSG00000213996|chr19:19268032-19268032|A/G|missense_variant	60.29395666154354	0.21116425950210296	1				NaN	NaN	0	NaN	2822	3439	6262
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6264	22.259	NaN	2579.8	30	0	226.55	0.106	+			4782	ATNILTATRK	10	63	544.8250859741798	1087.6356190151596	2	544.8258056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATNILTATRK_	ACAP2|p.G547Efs*90|1|0.05|ENSG00000114331|chr3:195295740-195295741|-/TTCTACATATT|frameshift_variant;ACAP2|p.N618Tfs*15|1|0.31|ENSG00000114331|chr3:195292365-195292365|T/-|frameshift_variant;ENSG00000114331|ENST00000326793|ACAP2;ENST00000480906.5_1_3:195057651-195163594:-|nuORF	72.2432373244024	0.2589930451692646	1				NaN	NaN	0	NaN	2823	3439	6262
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6265	22.26	NaN	1639.7	30	0	182.48	0.106			+	13555	GLSRPPKTGK	10	58	520.8140483040593	1039.6135436749184	2	520.81494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GLSRPPKTGK_	REV__L1PB1_dup10508|chr13:43056899-43059152:-|2.941020511291588|0.4940460713329822|2.57|483.0|67|3|sense	58.62960593111931	0.3783037861296717	1				NaN	NaN	0	NaN	2824	3439	6262
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6266	22.262	NaN	2151.3	30	0	186.29	0.035	+			31095	QFQEILRL	8	63	523.8032303625668	1045.5919077919334	2	523.8038330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QFQEILRL_	ENSG00000134444|ENST00000644646|RELCH;nc|ENSG00000134444|Q9P260-2|RELCH;nc|ENSG00000134444|Q9P260|RELCH	32.81241826257853	0.7059802730411993	1				NaN	NaN	0	NaN	2825	3439	6262
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6275	22.284	NaN	7431.6	30	0	2752.6	0.214				-1	 	0	59	362.7588852911762	723.5032176491525	2	362.75885009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	2831	3442	6274
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6276	22.288	NaN	2707.7	30	0	341	0.106	+			44053	TPRDRPRH	8	67	517.7833515771202	1033.5521502210404	2	517.783447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TPRDRPRH_	RARA|p.G429Vfs*214|1|0.12|ENSG00000131759|chr17:40356118-40356118|G/-|frameshift_variant	45.9519527083369	0.6193794311207887	1				NaN	NaN	0	NaN	2832	3442	6274
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6277	22.29	NaN	4818.9	30	0	764.28	0.106	+			46352	VEKPVGVAA	9	57	435.2581434141821	868.5017338951642	2	435.25799560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VEKPVGVAA_	ENSG00000131149|ENST00000253458|GSE1;ENST00000562659.1_1_16:85698640-85699994:+|nuORF;GSE1|p.P1093Qfs*45|1|0.45|ENSG00000131149|chr16:85668282-85668282|C/-|frameshift_variant;nc|ENSG00000131149|Q14687-2|GSE1;nc|ENSG00000131149|Q14687-3|GSE1	47.657333605630114	0.33044192980041115	1				NaN	NaN	0	NaN	2833	3442	6274
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6278	22.291	NaN	3837.8	30	0	439.92	0.106				-1	 	0	63	545.7793794798881	1089.5442060265761	2	545.7801513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	2834	3442	6274
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6279	22.293	NaN	1094	30	0	102.24	0.106	+			17844	IFLYANTTL	9	49	528.2904663085938	NaN	0	528.2904663085938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IFLYANTTL_	L1MB4_dup8351|chr19:41723964-41725199:-|4.338323541633806|0.1814582314154843|4.58|482.0|45|1|anti-sense	42.86426827375447	0.2558691296974908	1				NaN	NaN	0	NaN	2835	3442	6274
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6280	22.295	NaN	2976.2	30	0	510.47	0.106	+			1163	AENGEALGVL	10	60	486.75273838812024	971.4909238430405	2	487.2522277832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AENGEALGVL_	ENSG00000166126|ENST00000299155|AMN;ENST00000541086.5_1_14:103389974-103397014:+|nuORF;ENST00000558590.1_1_14:103395319-103397951:+|nuORF	56.72105179125745	0.3956618550748046	1				NaN	NaN	0	NaN	2836	3442	6274
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6281	22.297	NaN	1655.8	30	0	472.19	0.034	+			23886	LDIIPCAIS	9	50	472.76142574244824	NaN	0	472.76153564453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LDIIPCAIS_	KIF26B|p.G567D|1|0.28|ENSG00000162849|chr1:245609314-245609314|G/A|missense_variant	27.882242232435846	0.3367954786602879	1				NaN	NaN	0	NaN	2837	3442	6274
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6293	22.323	NaN	9388.4	30	0	1524.2	0.214	+			3380	ASQCGSLIGK	10	64	510.76076083270675	1019.5069687322135	2	510.7609558105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_ASQC(Carbamidomethyl (C))GSLIGK_	ENSG00000090097|ENST00000461554|PCBP4;ENSG00000183570|ENST00000681687|PCBP3;ENSG00000197111|ENST00000546463|PCBP2;ENST00000468429.5_1_21:47321003-47359956:+|nuORF;ENST00000492809.5_1_3:51992079-51994784:-|nuORF;ENST00000497390.5_1_3:51992079-51994784:-|nuORF;ENST00000547717.1_1_12:53848575-53861193:+|nuORF;ENST00000548190.1_1_12:53849722-53854210:+|nuORF;nc|ENSG00000090097|P57723-2|PCBP4;nc|ENSG00000183570|P57721-2|PCBP3;nc|ENSG00000183570|P57721-3|PCBP3;nc|ENSG00000183570|P57721-4|PCBP3;nc|ENSG00000183570|P57721-5|PCBP3;nc|ENSG00000197111|Q15366-2|PCBP2;nc|ENSG00000197111|Q15366-4|PCBP2;nc|ENSG00000197111|Q15366-5|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;nc|ENSG00000197111|Q15366-7|PCBP2;nc|ENSG00000197111|Q15366-8|PCBP2;nc|ENSG00000197111|Q15366|PCBP2;PCBP2|p.T202Kfs*26|1|0.32|ENSG00000197111|chr12:53464773-53464773|C/-|frameshift_variant;PCBP4|p.G203Efs*11|1|0.1|ENSG00000090097|chr3:51959397-51959398|-/CTCT|frameshift_variant	142.36107225718385	0.01012457621782354	1				NaN	NaN	0	NaN	2846	3445	6292
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6294	22.326	NaN	4397.9	30	0	726.01	0.106	+			47028	VLCPPPVKK	9	57	490.801449228017	979.5883455228341	2	490.80157470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VLCPPPVKK_	ENSG00000136238|ENST00000348035|RAC1;ENSG00000169750|ENST00000306897|RAC3;ENST00000419413.1_1_X:136523419-136523611:-|nuORF;ENST00000488373.5_1_7:6415539-6442074:+|nuORF;nc|ENSG00000136238|P63000-2|RAC1	79.71258880314673	0.09879134589249085	1				NaN	NaN	0	NaN	2847	3445	6292
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6295	22.328	NaN	1070.8	30	0	190.2	0.106	+			5778	AVGQESPGGL	10	41	457.7324959234561	913.4504389137122	2	457.732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVGQESPGGL_	ENSG00000121892|ENST00000303538|PDS5A	31.529811441608018	0.6223461015008678	1				NaN	NaN	0	NaN	2848	3445	6292
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6296	22.33	NaN	1643.8	30	0	140.3	0.106				-1	ASNCFAIRH	9	63	538.2587771935312	1074.5030014538622	2	538.2589111328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_ASNC(Carbamidomethyl (C))FAIRH_	ARHGEF7-ITM2B|1|fusion;ARHGEF7-ITM2B|2|fusion;ARHGEF7-ITM2B|3|fusion;ARHGEF7-ITM2B|4|fusion;ENSG00000136156|ENST00000647800|ITM2B;ITM2B|p.R243C|1|0.39|ENSG00000136156|chr13:48261150-48261150|C/T|missense_variant;nc|ENSG00000136156|Q9Y287-2|ITM2B	37.81151784470057	0.4459294069877048	1				NaN	NaN	0	NaN	2849	3445	6292
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6297	22.332	NaN	1638	30	0	338.7	0.106				-1	LVSCPLLFL	9	43	523.8032303625668	1045.5919077919334	2	523.80322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LVSCPLLFL_	ENST00000407418.7_1_22:39259662-39259899:-|nuORF	26.79610172149135	0.5528238334041078	1				NaN	NaN	0	NaN	2850	3445	6292
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6298	22.334	NaN	4559.8	30	0	1216.8	0.106	+			5827	AVIGNVQEK	9	59	479.2715442741953	956.5285356151907	2	479.27166748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AVIGNVQEK_	ENSG00000124786|ENST00000644923|SLC35B3;nc|ENSG00000124786|Q9H1N7-3|SLC35B3	115.49404669440601	0.023927554121326553	1				NaN	NaN	0	NaN	2851	3445	6292
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6299	22.336	NaN	1780.6	30	0	323.34	0.037	+			40006	STMSIRVTQK	10	53	575.8161206936179	NaN	0	575.8159790039062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STMSIRVTQK_	nc|ENSG00000170421|P05787-2|KRT8	45.02220120713402	0.3370728479115332	1				NaN	NaN	0	NaN	2852	3445	6292
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6310	22.361	NaN	12830	30	0	2522.6	0.214	+			45067	TVHNIIVGK	9	84	327.5344514608104	979.5815249826312	3	327.53448486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVHNIIVGK_	ENSG00000110048|ENST00000263847|OSBP;ENSG00000184792|ENST00000332585|OSBP2;nc|ENSG00000184792|Q969R2-2|OSBP2;nc|ENSG00000184792|Q969R2-3|OSBP2;nc|ENSG00000184792|Q969R2-4|OSBP2;nc|ENSG00000184792|Q969R2-5|OSBP2;nc|ENSG00000184792|Q969R2-6|OSBP2	71.87747018426188	0.13267044672804276	1				NaN	NaN	0	NaN	2860	3448	6309
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6311	22.365	NaN	4213.3	30	0	583.3	0.106	+			8872	EERRIKEIV	9	43	391.23120385031757	1170.6717821511527	3	391.2310791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EERRIKEIV_	ENSG00000080824|ENST00000216281|HSP90AA1;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;HSP90AA1|p.K419Nfs*3|1|0.25|ENSG00000080824|chr14:102083874-102083874|T/-|frameshift_variant;HSP90AA1|p.S330Qfs*48|1|0.21|ENSG00000080824|chr14:102084558-102084558|A/-|frameshift_variant;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000205955|Q58FG0|HSP90AA5P	49.44154591367651	0.3095138337212152	1				NaN	NaN	0	NaN	2861	3448	6309
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6312	22.367	NaN	4682.5	30	0	866.01	0.106	+			16897	HPIQTQAQY	9	57	543.2716775182306	1084.5288021032611	2	543.2727661132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HPIQTQAQY_	ENSG00000161813|ENST00000398473|LARP4;ENST00000521120.1_1_12:50835423-50848201:+|nuORF;LARP4|p.N373Ifs*3|1|0.26|ENSG00000161813|chr12:50454408-50454408|A/-|frameshift_variant;nc|ENSG00000161813|Q71RC2-2|LARP4;nc|ENSG00000161813|Q71RC2-3|LARP4;nc|ENSG00000161813|Q71RC2-4|LARP4;nc|ENSG00000161813|Q71RC2-6|LARP4;nc|ENSG00000161813|Q71RC2-7|LARP4	75.04331003522576	0.118981335847003	1				NaN	NaN	0	NaN	2862	3448	6309
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6313	22.369	NaN	4164.2	30	0	1005.4	0.106			+	31348	QIVQRCDKK	9	65	559.3108554692532	1116.6071580053062	2	559.3109741210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QIVQRCDKK_	REV__CDCA7L|p.C406Vfs*46|1|0.5|ENSG00000164649|chr7:21903097-21903097|G/-|frameshift_variant;REV__CDCA7L|p.L231Yfs*24|1|0.06|ENSG00000164649|chr7:21906629-21906630|-/CTGATAT|frameshift_variant;REV__ENSG00000164649|ENST00000406877|CDCA7L;REV__nc|ENSG00000164649|Q96GN5-2|CDCA7L;REV__nc|ENSG00000164649|Q96GN5-4|CDCA7L;REV__nc|ENSG00000164649|Q96GN5-5|CDCA7L	41.42661286455405	0.403525789677298	1				NaN	NaN	0	NaN	2863	3448	6309
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6314	22.371	NaN	2404.8	30	0	258.06	0.106	+			21404	KMPKINMSGPK	11	65	615.8379526160055	1229.661352298811	2	615.8381958007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KMPKINMSGPK_	AHNAK|p.H5029N|1|0.21|ENSG00000124942|chr11:62519332-62519332|G/T|missense_variant	50.033510581677724	0.4206539900604183	1				NaN	NaN	0	NaN	2864	3448	6309
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6315	22.372	NaN	3197	30	0	405.94	0.106	+			48287	VTDSPRILK	9	69	514.80902484848	1027.60349676376	2	514.8086547851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTDSPRILK_	ENSG00000142197|ENST00000691173|DOP1B;nc|ENSG00000142197|Q9Y3R5-2|DOP1B	120.27252224102466	0.02103478360410217	1				NaN	NaN	0	NaN	2865	3448	6309
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6316	22.374	NaN	2018.6	30	0	257.83	0.035	+			45734	VADPETRTV	9	60	494.25881578943336	986.5030786456667	2	494.25860595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VADPETRTV_	ENSG00000039650|ENST00000322344|PNKP;ENST00000593946.5_1_19:50364507-50370327:-|nuORF;ENST00000594661.5_1_19:50367579-50369988:-|nuORF;ENST00000595792.1_1_19:50369586-50370764:-|nuORF;nc|ENSG00000039650|Q96T60-2|PNKP	59.93077597824379	0.21419174904018318	1				NaN	NaN	0	NaN	2866	3448	6309
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6327	22.4	NaN	6838.8	30	0	649.82	0.214	+			39922	STMDLVKSK	9	66	504.77325670831084	1007.5319604834217	2	504.77337646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STMDLVKSK_	ENSG00000107625|ENST00000373585|DDX50	93.5975768576971	0.05472259948179787	1				NaN	NaN	0	NaN	2874	3451	6326
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6328	22.404	NaN	10195	30	0	2496.6	0.106	+			15016	GTNFTKLEK	9	63	519.2848639966161	1036.555175060032	2	519.2855224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTNFTKLEK_	ENSG00000115514|ENST00000264255|TXNDC9	114.85826248499774	0.024312442104607014	1				NaN	NaN	0	NaN	2875	3451	6326
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6329	22.406	NaN	9512	30	0	1026.3	0.106	+			3801	ATAGIIGVNRK	11	73	550.3324867679814	1098.6504206027628	2	550.33349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATAGIIGVNRK_	CLTC-CEP95|1|fusion;CLTC|p.A1374*|1|0.05|ENSG00000141367|chr17:59683464-59683465|-/TA|frameshift_variant;CLTC|p.D632Yfs*7|1|0.15|ENSG00000141367|chr17:59666589-59666590|-/TTACA|frameshift_variant;ENSG00000141367|ENST00000269122|CLTC;ENST00000472129.3_1_17:57725612-57733400:+|nuORF;nc|ENSG00000141367|Q00610-2|CLTC	125.68205650279488	0.009258456973060042	1				NaN	NaN	0	NaN	2876	3451	6326
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6330	22.407	NaN	4419.4	30	0	668.31	0.106	+			26575	LTTKATLVLN	10	63	537.3319790914746	1072.6494052497492	2	537.3318481445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LTTKATLVLN_	ENSG00000130021|ENST00000381077|PUDP;nc|ENSG00000130021|Q08623-2|PUDP;nc|ENSG00000130021|Q08623-4|PUDP	41.42661286455405	0.5359995577334734	1				NaN	NaN	0	NaN	2877	3451	6326
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6331	22.409	NaN	3918.2	30	0	704.56	0.106			+	21195	KLDAKSWIYK	10	67	626.3562033878206	1250.6978538424412	2	626.3565673828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KLDAKSWIYK_	REV__ENSG00000134321|ENST00000382040|RSAD2	58.2462437865262	0.38179041844353556	1				NaN	NaN	0	NaN	2878	3451	6326
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6332	22.411	NaN	2926.3	30	0	347.81	0.106			+	12089	GAAQLLGQM	9	58	444.73392163831465	887.4532903434293	2	444.7337951660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GAAQLLGQM_	REV__ENST00000530691.5_1_11:12229562-12281716:+|nuORF;REV__nc|ENSG00000133816|O94851-2|MICAL2;REV__nc|ENSG00000133816|O94851-4|MICAL2;REV__nc|ENSG00000133816|O94851-6|MICAL2	47.91560031466742	0.327412564698279	1				NaN	NaN	0	NaN	2879	3451	6326
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6333	22.413	NaN	9962.9	30	0	3766.9	0.035				-1	ASTALTLGKM	10	48	336.8510567069695	1007.5313407211084	3	336.85125732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_ASTALTLGKM(Oxidation (M))_	ENST00000413432.2_1_2:242382378-242382501:+|nuORF	28.081489160057373	0.6505064946289502	1				NaN	NaN	0	NaN	2880	3451	6326
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6344	22.439	NaN	24082	30	0	7944.3	0.214	+			3802	ATAGIIGVNRK	11	54	367.2241237073927	1098.6505417223782	3	367.2241516113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATAGIIGVNRK_	CLTC-CEP95|1|fusion;CLTC|p.A1374*|1|0.05|ENSG00000141367|chr17:59683464-59683465|-/TA|frameshift_variant;CLTC|p.D632Yfs*7|1|0.15|ENSG00000141367|chr17:59666589-59666590|-/TTACA|frameshift_variant;ENSG00000141367|ENST00000269122|CLTC;ENST00000472129.3_1_17:57725612-57733400:+|nuORF;nc|ENSG00000141367|Q00610-2|CLTC	61.76455937419982	0.30770400073182314	1				NaN	NaN	0	NaN	2888	3454	6343
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6345	22.442	NaN	5317.8	30	0	1287	0.106	+			15040	GTNPGIITK	9	53	450.7611798112973	899.5078066893947	2	450.7607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTNPGIITK_	ENSG00000136247|ENST00000335965|ZDHHC4;ENST00000474097.5_1_7:6620192-6623202:+|nuORF	66.9202029811203	0.15592758990009112	1				NaN	NaN	0	NaN	2889	3454	6343
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6346	22.444	NaN	4112.7	30	0	507.72	0.106			+	-1	IMQQMLQQQ	9	64	590.2780910790141	1178.541629224828	2	590.2783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Oxidation (M)	_IM(Oxidation (M))QQM(Oxidation (M))LQQQ_	REV__ENSG00000160803|ENST00000368309|UBQLN4	53.351449002276354	0.2690372970092375	1				NaN	NaN	0	NaN	2890	3454	6343
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6347	22.446	NaN	2249.2	30	0	305.11	0.106	+			1578	AGIIGVNRK	9	55	464.29019192710405	926.5658309210081	2	464.2897033691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AGIIGVNRK_	CLTC-CEP95|1|fusion;CLTC|p.A1374*|1|0.05|ENSG00000141367|chr17:59683464-59683465|-/TA|frameshift_variant;CLTC|p.D632Yfs*7|1|0.15|ENSG00000141367|chr17:59666589-59666590|-/TTACA|frameshift_variant;ENSG00000141367|ENST00000269122|CLTC;ENST00000472129.3_1_17:57725612-57733400:+|nuORF;nc|ENSG00000141367|Q00610-2|CLTC	101.21157088398209	0.03796561369277615	1				NaN	NaN	0	NaN	2891	3454	6343
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6348	22.448	NaN	2794.5	30	0	575.46	0.106	+			6483	AVYSHVIQK	9	65	522.7954909768619	1043.5764290205236	2	522.7958374023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVYSHVIQK_	ENSG00000135094|ENST00000257549|SDS;SDS|p.G305Afs*18|1|0.17|ENSG00000135094|chr12:113393014-113393014|C/-|frameshift_variant	77.31757898189308	0.1091473830098891	1				NaN	NaN	0	NaN	2892	3454	6343
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6349	22.45	NaN	793.96	30	0	130.02	0.106			+	50255	WPTKAGGA	8	36	394.2101728897693	NaN	0	394.2103271484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_WPTKAGGA_	REV__NAV1|p.L161Wfs*33|2|0.23|ENSG00000134369|chr1:201649144-201649144|C/-|frameshift_variant	33.51558372728122	1.7418937515398478	1				NaN	NaN	0	NaN	2893	3454	6343
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6350	22.451	NaN	3396.2	30	0	675.54	0.036	+			40944	SVFTSVRQK	9	62	526.2983807921098	1050.5822086510195	2	526.2977294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVFTSVRQK_	ENSG00000127616|ENST00000344626|SMARCA4;ENST00000585799.5_1_19:11132109-11172489:+|nuORF;ENST00000591595.5_1_19:11130023-11172489:+|nuORF;ENST00000592604.5_1_19:11123597-11172489:+|nuORF;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;nc|ENSG00000127616|P51532-5|SMARCA4	95.81516180277367	0.04847050768394289	1				NaN	NaN	0	NaN	2894	3454	6343
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6360	22.475	NaN	3921.6	30	0	542.52	0.214	+			24635	LGSRGRRR	8	54	479.29518129003077	956.5758096468616	2	479.2951965332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LGSRGRRR_	ENSG00000161681|ENST00000293441|SHANK1;nc|ENSG00000161681|Q9Y566-3|SHANK1;REV__ENSG00000257008|ENST00000582579|GPR142;REV__nc|ENSG00000257008|Q7Z601|GPR142;SHANK1|p.L2065Sfs*68|1|0.18|ENSG00000161681|chr19:50662259-50662259|C/-|frameshift_variant;SHANK1|p.T693Pfs*33|2|0.23|ENSG00000161681|chr19:50688940-50688940|G/-|frameshift_variant	63.30626980617807	0.4690498839812213	1				NaN	NaN	0	NaN	2901	3457	6359
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6361	22.478	NaN	3510.8	30	0	1059.2	0.106				-1	 	0	49	384.77206107446415	767.5295692157283	2	384.77203369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	2902	3457	6359
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6362	22.48	NaN	3146.8	30	0	435.44	0.106	+			26368	LTCPPTKVYK	10	60	603.8313696976797	1205.6481864621594	2	603.8311767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LTC(Carbamidomethyl (C))PPTKVYK_	ENSG00000117983|ENST00000529681|MUC5B	72.2432373244024	0.2589930451692646	1				NaN	NaN	0	NaN	2903	3457	6359
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6363	22.482	NaN	1923.5	30	0	216.7	0.106			+	12652	GEIKLTMQQ	9	60	532.2764202071036	1062.538287481007	2	532.2767944335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_GEIKLTM(Oxidation (M))QQ_	REV__C3|p.A1045Pfs*26|1|0.09|ENSG00000125730|chr19:6694452-6694452|C/-|frameshift_variant;REV__C3|p.S1008Rfs*8|3|0.41|ENSG00000125730|chr19:6694564-6694564|G/-|frameshift_variant;REV__ENSG00000125730|ENST00000245907|C3	101.25262130126117	0.03792372629710479	1				NaN	NaN	0	NaN	2904	3457	6359
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6364	22.484	NaN	2277.8	30	0	292.95	0.106			+	9078	EGGVFLLREQ	10	56	574.3087106586585	1146.6028683841168	2	574.3093872070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EGGVFLLREQ_	REV__ENSG00000135686|ENST00000564996|KLHL36;REV__KLHL36|p.G345Afs*39|1|0.21|ENSG00000135686|chr16:84657836-84657836|G/-|frameshift_variant;REV__KLHL36|p.G451Afs*29|1|0.24|ENSG00000135686|chr16:84661629-84661629|G/-|frameshift_variant;REV__nc|ENSG00000135686|Q8N4N3-2|KLHL36	41.080066990542036	0.5391928043837881	1				NaN	NaN	0	NaN	2905	3457	6359
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6365	22.486	NaN	1946.7	30	0	907.86	0.106			+	5737	AVFVQEPVR	9	41	348.8659582978988	1043.5760454938966	3	348.8659362792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AVFVQEPVR_	REV__ENSG00000147180|ENST00000674551|ZNF711;REV__nc|ENSG00000147180|Q9Y462-2|ZNF711;REV__nc|ENSG00000147180|Q9Y462|ZNF711;REV__ZNF711|p.F514Lfs*5|1|0.07|ENSG00000147180|chrX:85271084-85271085|TC/-|frameshift_variant;REV__ZNF711|p.H694Tfs*14|3|0.25|ENSG00000147180|chrX:85271614-85271615|-/A|frameshift_variant	25.450171626174864	0.5654022654467333	1				NaN	NaN	0	NaN	2906	3457	6359
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6366	22.487	NaN	3096.3	30	0	1304.3	0.035			+	26719	LVKSVQKVP	9	44	333.2183864106651	NaN	0	333.2183837890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LVKSVQKVP_	REV__ENST00000478311.1_1_2:27587269-27587801:-|nuORF	27.882242232435846	0.3367954786602879	1				NaN	NaN	0	NaN	2907	3457	6359
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6373	22.505	NaN	2256.2	30	0	270.06	0.214	+			18465	ISFDASKAK	9	51	483.7660845779531	965.5176162227062	2	483.76593017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ISFDASKAK_	ENSG00000075568|ENST00000186436|TMEM131;TMEM131|p.G555Wfs*10|1|0.32|ENSG00000075568|chr2:97812704-97812705|-/A|frameshift_variant;TMEM131|p.L1469Tfs*5|1|0.43|ENSG00000075568|chr2:97772340-97772341|-/T|frameshift_variant;TMEM131|p.L538Ffs*27|1|0.09|ENSG00000075568|chr2:97813974-97813975|-/A|frameshift_variant;TMEM131|p.N815Ifs*2|1|0.27|ENSG00000075568|chr2:97802749-97802749|T/-|frameshift_variant;TMEM131|p.N815Kfs*9|1|0.31|ENSG00000075568|chr2:97802748-97802749|-/T|frameshift_variant	85.86182877749512	0.07653218437724067	1				NaN	NaN	0	NaN	2911	3460	6372
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6374	22.509	NaN	4330.7	30	0	537.37	0.106	+			7708	DLQGTLPHQER	11	76	647.3309112503906	1292.6472695675811	2	647.3313598632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DLQGTLPHQER_	ENST00000501294.1_1_11:115628790-115629563:-|nuORF	40.05817265558897	0.5571470695993369	1				NaN	NaN	0	NaN	2912	3460	6372
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6375	22.511	NaN	5359.1	30	0	1246.2	0.106			+	10273	ETLSKGLVVA	10	64	339.5376788937168	1015.5912072813505	3	339.5374755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ETLSKGLVVA_	REV__ENSG00000124406|ENST00000381668|ATP8A1;REV__nc|ENSG00000124406|Q9Y2Q0-2|ATP8A1;REV__nc|ENSG00000124406|Q9Y2Q0-3|ATP8A1	53.351449002276354	0.42630798468005626	1				NaN	NaN	0	NaN	2913	3460	6372
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6376	22.513	NaN	2609.3	30	0	320.16	0.106	+			42824	TEAVVKEKL	9	55	508.8051673992323	1015.5957818652646	2	508.8031005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TEAVVKEKL_	ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1	90.60085204095205	0.06317133949006545	1				NaN	NaN	0	NaN	2914	3460	6372
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6377	22.515	NaN	1494.3	30	0	193.36	0.106	+			48719	VTTTSQARELR	11	46	631.3473385001641	1260.6801240671282	2	631.3468627929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTTTSQARELR_	ENSG00000130589|ENST00000467148|HELZ2;HELZ2|p.G2213Vfs*22|1|0.14|ENSG00000130589|chr20:63561876-63561876|C/-|frameshift_variant;HELZ2|p.P1310Rfs*32|1|0.09|ENSG00000130589|chr20:63564893-63564893|G/-|frameshift_variant;HELZ2|p.R2206Vfs*29|2|0.28|ENSG00000130589|chr20:63561898-63561898|G/-|frameshift_variant;nc|ENSG00000130589|Q9BYK8-2|HELZ2;nc|ENSG00000130589|Q9BYK8|HELZ2	23.52269567125451	0.7430573033454468	1				NaN	NaN	0	NaN	2915	3460	6372
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6378	22.516	NaN	1637.6	30	0	797.06	0.034	+			27112	MAPENKVAD	9	50	487.73489363825314	973.4552343433063	2	487.73468017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MAPENKVAD_	CEP170|p.N481Ifs*26|1|0.13|ENSG00000143702|chr1:243185903-243185903|T/-|frameshift_variant;CEP170|p.T718Pfs*5|1|0.11|ENSG00000143702|chr1:243165808-243165808|T/-|frameshift_variant;CEP170|p.V1192Yfs*26|1|0.1|ENSG00000143702|chr1:243164387-243164387|T/-|frameshift_variant;ENSG00000143702|ENST00000366542|CEP170;nc|ENSG00000143702|Q5SW79-2|CEP170;nc|ENSG00000143702|Q5SW79-3|CEP170	37.81151784470057	0.4459294069877048	1				NaN	NaN	0	NaN	2916	3460	6372
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6386	22.536	NaN	13146	30	0	5477.9	0.214				-1	ASKFMTHVA	9	62	336.50406837165053	1006.4903757151517	3	336.5041809082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ASKFM(Oxidation (M))THVA_	ENSG00000113272|ENST00000231198|THG1L	34.172542307311794	0.4838870758800184	1				NaN	NaN	0	NaN	2921	3463	6385
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6387	22.54	NaN	1331.9	30	0	238.92	0.106			+	-1	CSGVCHLM	8	51	433.1717978039795	NaN	0	433.1717224121094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_CSGVCHLM(Oxidation (M))_	REV__ENST00000244230.6_1_2:71357715-71357787:+|nuORF	29.841539824830324	1.7418937515398478	1				NaN	NaN	0	NaN	2922	3463	6385
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6388	22.542	NaN	2584.1	30	0	297.09	0.106	+			38929	SSQNAFMQK	9	58	520.7449286981799	1039.4753044631598	2	520.7451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSQNAFMQK_	ENST00000533415.5_1_17:45247369-45258963:-|nuORF	63.53385203322761	0.18415635464017938	1				NaN	NaN	0	NaN	2923	3463	6385
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6389	22.543	NaN	2037.5	30	0	192.87	0.106			+	38926	SSQGVAEAQL	10	52	330.5007735598998	988.4804912798995	3	330.5005798339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSQGVAEAQL_	REV__ENSG00000122574|ENST00000242140|WIPF3	30.568863376406313	0.6301935916953115	1				NaN	NaN	0	NaN	2924	3463	6385
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6390	22.545	NaN	1803.6	30	0	453.27	0.106	+			22437	KTLDQAKAVLK	11	61	607.8770015941285	1213.739450255057	2	608.3793334960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KTLDQAKAVLK_	ENSG00000135372|ENST00000257829|NAT10;nc|ENSG00000135372|Q9H0A0-2|NAT10	75.78808549251582	0.1874862790312707	1				NaN	NaN	0	NaN	2925	3463	6385
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6391	22.547	NaN	1594.7	30	0	575.07	0.106			+	-1	VVQVMQSAP	9	47	487.7528553857655	NaN	0	487.75274658203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_VVQVM(Oxidation (M))QSAP_	REV__ENSG00000197483|ENST00000598519|ZNF628	42.396135135203025	0.2590952873412954	1				NaN	NaN	0	NaN	2926	3463	6385
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6392	22.549	NaN	1205.6	30	0	330.61	0.035				-1	YCVASYVLG	9	46	516.2493051051285	NaN	0	516.2498168945312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_YC(Carbamidomethyl (C))VASYVLG_	ENSG00000051382|ENST00000674063|PIK3CB;ENST00000481749.5_1_3:138374233-138426144:-|nuORF;PIK3CB|p.T930Lfs*62|1|0.47|ENSG00000051382|chr3:138663914-138663914|T/-|frameshift_variant	20.481830146152948	0.3676602570045296	1				NaN	NaN	0	NaN	2927	3463	6385
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6399	22.565	NaN	3662	30	0	629.5	0.214	+			39087	SSSSVLINK	9	55	467.76378963636193	933.5130263395239	2	467.7635498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSSSVLINK_	ENSG00000120278|ENST00000696526|PLEKHG1	93.1432384553994	0.056003526918089595	1				NaN	NaN	0	NaN	2931	3466	6398
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6400	22.569	NaN	1477.3	30	0	197.74	0.106	+			2906	ASAYSIAQK	9	52	469.7504750171717	937.4863971011434	2	469.7508850097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASAYSIAQK_	ENSG00000162813|ENST00000322067|BPNT1;nc|ENSG00000162813|O95861-2|BPNT1;nc|ENSG00000162813|O95861-4|BPNT1	70.8162118820467	0.13725933411854815	1				NaN	NaN	0	NaN	2932	3466	6398
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6401	22.571	NaN	2172.6	30	0	406.55	0.106			+	11252	FILLISLGSAL	11	48	573.8582137760255	1145.701874618851	2	573.8590698242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FILLISLGSAL_	REV__chr15:53523322-53540662|232|17.27|0.17|6.68|-|1|TE_info:L1PA2,L1PA2_dup4399,L1,LINE,donor,+,53540662,53546677|WDR72,None|59;REV__L1PA6_dup546|chr2:49227587-49231532:-|4.547726375381561|0.2927699401366612|3.96|483.0|238|3|anti-sense	19.1035232394073	0.7810393085260824	1				NaN	NaN	0	NaN	2933	3466	6398
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6402	22.573	NaN	1572.6	30	0	197.29	0.035	+			25629	LQQKLNVGK	9	51	514.3159633672226	1026.617373801245	2	514.3162841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LQQKLNVGK_	ENSG00000108840|ENST00000682912|HDAC5;HDAC5|p.I932Hfs*24|1|0.42|ENSG00000108840|chr17:44080432-44080433|-/G|frameshift_variant;HDAC5|p.I932Lfs*14|3|0.32|ENSG00000108840|chr17:44080433-44080433|G/-|frameshift_variant;HDAC5|p.L865P|1|0.42|ENSG00000108840|chr17:44082598-44082598|A/G|missense_variant;nc|ENSG00000108840|Q9UQL6-2|HDAC5;nc|ENSG00000108840|Q9UQL6-3|HDAC5	34.172542307311794	0.4838870758800184	1				NaN	NaN	0	NaN	2934	3466	6398
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6413	22.598	NaN	4192.4	30	0	658.84	0.214	+			17002	HPTDDTTTL	9	56	500.73284488821656	999.4511368432331	2	500.7327575683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HPTDDTTTL_	ENSG00000089327|ENST00000392219|FXYD5;ENST00000591716.6_1_19:35651643-35657154:+|nuORF;nc|ENSG00000089327|Q96DB9-2|FXYD5	53.351449002276354	0.2690372970092375	1				NaN	NaN	0	NaN	2942	3469	6412
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6414	22.602	NaN	2992.2	30	0	348.65	0.106			+	30269	PTEARQNAP	9	61	492.24876474743945	982.4829765616789	2	492.2486267089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PTEARQNAP_	REV__ENSG00000163872|ENST00000305135|YEATS2;REV__YEATS2|p.T1011Pfs*25|1|0.46|ENSG00000163872|chr3:183790909-183790909|C/-|frameshift_variant	26.69291269510374	0.5537881896960711	1				NaN	NaN	0	NaN	2943	3469	6412
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6415	22.604	NaN	2447.6	30	0	648.03	0.106			+	38461	SSARPFDSV	9	48	483.2369178365803	964.4592827399606	2	483.2367858886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSARPFDSV_	REV__ENST00000526097.1_1_8:11418120-11421614:+|nuORF	29.14955571784316	0.5308295550522326	1				NaN	NaN	0	NaN	2944	3469	6412
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6416	22.606	NaN	2481.8	30	0	414.44	0.106	+			48422	VTISHAIGR	9	55	477.2787361313158	952.5429193294316	2	477.2798156738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTISHAIGR_	ENSG00000007376|ENST00000007264|RPUSD1	79.71258880314673	0.09879134589249085	1				NaN	NaN	0	NaN	2945	3469	6412
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6417	22.608	NaN	2698.1	30	0	1309.2	0.106			+	22302	KTEPPLTSW	9	61	529.7798196657809	1057.5450863983617	2	529.7798461914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KTEPPLTSW_	REV__ENSG00000224389|ENST00000435363|C4B;REV__ENSG00000244731|ENST00000428956|C4A;REV__nc|ENSG00000244731|P0C0L4-2|C4A	37.81151784470057	0.4459294069877048	1				NaN	NaN	0	NaN	2946	3469	6412
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6418	22.609	NaN	1682.6	30	0	259.81	0.106	+			5953	AVLKPGAWSRK	11	41	606.8643908606903	NaN	0	606.8634643554688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AVLKPGAWSRK_	ENST00000308521.9_1_22:39436844-39436913:+|nuORF	25.06778042989391	0.45369953550010306	1				NaN	NaN	0	NaN	2947	3469	6412
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6419	22.611	NaN	2308.7	30	0	477.02	0.035	+			44762	TTNLSIQQK	9	60	516.7875947882327	1031.5606366432653	2	516.7880249023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TTNLSIQQK_	ENSG00000112701|ENST00000447266|SENP6;ENST00000474906.2_1_6:76388527-76407234:+|nuORF;nc|ENSG00000112701|Q9GZR1-2|SENP6;SENP6|p.G1004Efs*11|4|0.34|ENSG00000112701|chr6:75713700-75713700|A/-|frameshift_variant;SENP6|p.I864*|1|0.21|ENSG00000112701|chr6:75702940-75702940|A/-|frameshift_variant	56.43379154798735	0.2433427591689151	1				NaN	NaN	0	NaN	2948	3469	6412
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6429	22.633	NaN	3618.3	30	0	862.44	0.214	+			40584	SVAGDFVKK	9	51	475.76872621089086	949.5228994885817	2	475.76837158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVAGDFVKK_	ENSG00000165238|ENST00000427277|WNK2;nc|ENSG00000165238|Q9Y3S1-2|WNK2;nc|ENSG00000165238|Q9Y3S1-4|WNK2;nc|ENSG00000165238|Q9Y3S1|WNK2;WNK2|p.T1980Lfs*12|2|0.16|ENSG00000165238|chr9:93297965-93297965|C/-|frameshift_variant	77.31757898189308	0.1091473830098891	1				NaN	NaN	0	NaN	2955	3472	6428
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6430	22.637	NaN	2973.9	30	0	1541.8	0.106	+			5952	AVLKPGAWSRK	11	56	404.9117758845314	1211.7134982537941	3	404.91168212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVLKPGAWSRK_	ENST00000308521.9_1_22:39436844-39436913:+|nuORF	49.46582953369473	0.42842160004107194	1				NaN	NaN	0	NaN	2956	3472	6428
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6431	22.639	NaN	3104.6	30	0	1338.9	0.106	+			21561	KNYQGRPWS	9	46	379.193094310198	1134.557453530794	3	379.52703857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KNYQGRPWS_	ENSG00000162631|ENST00000370068|NTNG1;ENST00000294649.8_1_1:107691215-107950335:+|nuORF;nc|ENSG00000162631|Q9Y2I2-1|NTNG1;nc|ENSG00000162631|Q9Y2I2-2|NTNG1;nc|ENSG00000162631|Q9Y2I2-4|NTNG1;nc|ENSG00000162631|Q9Y2I2-5|NTNG1;nc|ENSG00000162631|Q9Y2I2-6|NTNG1	20.94693142431847	0.6074874384046576	1				NaN	NaN	0	NaN	2957	3472	6428
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6432	22.64	NaN	2988.5	30	0	932.09	0.106	+			36149	SEKVDRAVL	9	44	339.52899350970176	1015.5651511293054	3	339.5291442871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SEKVDRAVL_	ENSG00000123240|ENST00000378747|OPTN;nc|ENSG00000123240|Q96CV9-2|OPTN;nc|ENSG00000123240|Q96CV9-3|OPTN	32.81241826257853	0.4965981579233955	1				NaN	NaN	0	NaN	2958	3472	6428
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6433	22.642	NaN	1642.1	30	0	246.69	0.106				-1	 	0	54	520.2793032316508	519.2720267650508	1	520.28076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	2959	3472	6428
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6434	22.644	NaN	1617.1	30	0	297.6	0.035			+	50234	WPGGPPLLVA	10	51	503.78752416881855	NaN	0	503.7874450683594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_WPGGPPLLVA_	REV__ENSG00000124587|ENST00000304611|PEX6;REV__nc|ENSG00000124587|Q13608-2|PEX6;REV__nc|ENSG00000124587|Q13608-3|PEX6	39.252832667884924	0.37128895876774715	1				NaN	NaN	0	NaN	2960	3472	6428
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6441	22.662	NaN	5242.5	30	0	751.15	0.214	+			49371	VVSTVGMQR	9	59	488.76563240651177	NaN	0	488.7657775878906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVSTVGMQR_	CON__P35900;ENSG00000171431|ENST00000167588|KRT20	74.25504064058377	0.09106938647426577	1				NaN	NaN	0	NaN	2964	3475	6440
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6442	22.666	NaN	2063.7	30	0	170.96	0.106			+	17465	ICLHAMNI	8	53	457.7324017924922	913.4502506517845	2	457.73272705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ICLHAMNI_	REV__ENSG00000068976|ENST00000164139|PYGM;REV__ENSG00000100504|ENST00000216392|PYGL;REV__ENST00000528757.2_1_14:51382052-51382644:-|nuORF;REV__nc|ENSG00000068976|P11217-2|PYGM;REV__nc|ENSG00000100504|P06737-2|PYGL;REV__PYGL|p.S437N|1|0.22|ENSG00000100504|chr14:50915429-50915429|C/T|missense_variant;REV__PYGL|p.T677Qfs*4|1|0.33|ENSG00000100504|chr14:50910044-50910044|C/-|frameshift_variant;REV__PYGM|p.R439H|1|0.44|ENSG00000068976|chr11:64753606-64753606|C/T|missense_variant	65.89745868150666	0.44339748671293633	1				NaN	NaN	0	NaN	2965	3475	6440
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6443	22.667	NaN	6743.2	30	0	1823.8	0.106			+	26622	LVAHLPATSV	10	51	336.53408167643624	1006.5804156295087	3	336.5341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LVAHLPATSV_	REV__nc|ENSG00000258366|Q9NZ71-2|RTEL1	24.20275056022122	0.6821818413321409	1				NaN	NaN	0	NaN	2966	3475	6440
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6444	22.669	NaN	2417.4	30	0	221.6	0.106	+			36074	SEKDHMVTM	9	64	539.2395784184673	NaN	0	539.2389526367188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SEKDHMVTM_	ENSG00000130826|ENST00000369550|DKC1;nc|ENSG00000130826|O60832-2|DKC1	52.936696900407355	0.1864545979552969	1				NaN	NaN	0	NaN	2967	3475	6440
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6445	22.671	NaN	2480.3	30	0	445.76	0.106			+	-1	FVKAMNRKR	9	47	583.3376040165315	NaN	0	583.3379516601562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_FVKAM(Oxidation (M))NRKR_	REV__ENST00000469927.5_1_3:21603533-21606176:-|nuORF	23.04248740728303	0.3589936788096251	1				NaN	NaN	0	NaN	2968	3475	6440
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6446	22.673	NaN	1038.7	30	0	165.46	0.106			+	20412	KETLKTLE	8	44	481.28131103515625	NaN	0	481.28131103515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KETLKTLE_	REV__tr|U7T1Q6|U7T1Q6_FUSNUCelldivisionproteinFtsQOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00535PE=4SV=1	51.33545320467046	1.7418937515398478	1				NaN	NaN	0	NaN	2969	3475	6440
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6447	22.675	NaN	2052.2	30	0	214.16	0.035	+			5341	ATVRPPVAVK	10	55	519.3269785170833	1036.6394041009664	2	519.8294677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATVRPPVAVK_	COL6A3|p.A2956Lfs*45|1|0.33|ENSG00000163359|chr2:237336234-237336234|C/-|frameshift_variant;COL6A3|p.A2957Lfs*44|1|0.33|ENSG00000163359|chr2:237336232-237336232|A/-|frameshift_variant;COL6A3|p.G3016Vfs*19|1|0.34|ENSG00000163359|chr2:237334810-237334810|G/-|frameshift_variant;ENSG00000163359|ENST00000295550|COL6A3;ENST00000491769.1_1_2:238233419-238250825:-|nuORF;nc|ENSG00000163359|P12111-2|COL6A3;nc|ENSG00000163359|P12111-4|COL6A3	36.31764250033197	0.5830761606467809	1				NaN	NaN	0	NaN	2970	3475	6440
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6457	22.698	NaN	3957.7	30	0	532.79	0.214	+			5081	ATSLVFKQK	9	59	511.3059676097761	1020.5973822863522	2	511.3056945800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSLVFKQK_	ENSG00000227345|ENST00000616448|PARG;PARG|p.D904Tfs*4|1|0.16|ENSG00000227345|chr10:49820231-49820231|C/-|frameshift_variant;PARG|p.N277Mfs*5|3|0.4|ENSG00000227345|chr10:49933618-49933618|T/-|frameshift_variant	93.19546047674547	0.05585629608842056	1				NaN	NaN	0	NaN	2977	3478	6456
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6458	22.702	NaN	2733.2	30	0	1089.3	0.106	+			42594	TATATNHVL	9	50	464.2484073863522	926.4822618395044	2	464.2480163574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TATATNHVL_	ENSG00000004700|ENST00000444129|RECQL	31.529811441608018	0.5085848003137583	1				NaN	NaN	0	NaN	2978	3478	6456
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6459	22.704	NaN	3621.2	30	0	899.8	0.106			+	12337	GDKFKIVKS	9	37	341.2062404547841	1020.5968919645524	3	341.2063293457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GDKFKIVKS_	REV__ENSG00000152034|ENST00000281806|MCHR2	16.473147378115264	0.6112419832031293	1				NaN	NaN	0	NaN	2979	3478	6456
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6460	22.705	NaN	1559.3	30	0	729.29	0.106			+	35363	SAPPNLWI	8	32	449.2432449129587	896.4719368927174	2	449.743896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SAPPNLWI_	REV__ENSG00000156299|ENST00000541036|TIAM1;REV__nc|ENSG00000156299|Q13009-2|TIAM1;REV__TIAM1|p.V1273M|1|0.43|ENSG00000156299|chr21:31135999-31135999|C/T|missense_variant	24.20275056022122	0.7724576178584145	1				NaN	NaN	0	NaN	2980	3478	6456
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6461	22.707	NaN	1778.3	30	0	392.13	0.036			+	22878	KVLGKDPGQK	10	45	535.3219774037946	1068.629401874389	2	535.3228759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KVLGKDPGQK_	REV__ENSG00000157483|ENST00000288235|MYO1E	23.52269567125451	0.6877354443478558	1				NaN	NaN	0	NaN	2981	3478	6456
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6468	22.724	NaN	4649.9	30	0	686.08	0.214	+			4876	ATQCGSLIGK	10	66	517.7684375490392	1033.5223221648782	2	517.76904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_ATQC(Carbamidomethyl (C))GSLIGK_	ENSG00000169564|ENST00000303577|PCBP1	136.98908636845044	0.01155686115611441	1				NaN	NaN	0	NaN	2985	3481	6467
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6469	22.727	NaN	2016.3	30	0	301.98	0.106	+			5459	ATYTLFSHA	9	58	505.748766149424	1009.482979365648	2	505.749267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATYTLFSHA_	CDH1|p.F462Lfs*19|1|0.16|ENSG00000039068|chr16:68815577-68815577|T/-|frameshift_variant;CDH1|p.N315Kfs*6|1|0.32|ENSG00000039068|chr16:68811790-68811791|-/A|frameshift_variant;ENSG00000039068|ENST00000261769|CDH1;ENST00000562836.5_1_16:68797408-68867399:+|nuORF;nc|ENSG00000039068|P12830-2|CDH1	47.91560031466742	0.327412564698279	1				NaN	NaN	0	NaN	2986	3481	6467
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6470	22.729	NaN	2174.6	30	0	262.6	0.106	+			12865	GEQSVGKTSL	10	54	503.2639050130185	1004.513257092837	2	503.2637634277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEQSVGKTSL_	ENSG00000154917|ENST00000285208|RAB6B;ENSG00000175582|ENST00000336083|RAB6A;ENST00000541795.1_1_11:73441692-73471680:-|nuORF;nc|ENSG00000175582|P20340-2|RAB6A;nc|ENSG00000175582|P20340-3|RAB6A	65.15724298150197	0.31893571707528906	1				NaN	NaN	0	NaN	2987	3481	6467
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6471	22.731	NaN	1684.3	30	0	253.34	0.106				-1	 	0	47	338.70315314827064	NaN	0	338.70318603515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	2988	3481	6467
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6472	22.733	NaN	1451.6	30	0	489.94	0.106				-1	 	0	42	328.709323843642	655.404094754084	2	328.7095642089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	2989	3481	6467
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6473	22.735	NaN	1353.3	30	0	289.78	0.106	+			8612	ECLTEVIR	8	45	481.7523986724182	961.4902444116365	2	481.7522277832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ECLTEVIR_	ENSG00000163909|ENST00000372852|HEYL	44.116797842482775	0.6307669463330267	1				NaN	NaN	0	NaN	2990	3481	6467
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6474	22.736	NaN	1696.1	30	0	347.94	0.036	+			11300	FKNPQCPTL	9	54	552.7796995060842	1103.5448460789682	2	552.781494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_FKNPQC(Carbamidomethyl (C))PTL_	ENSG00000142609|ENST00000682832|CFAP74;nc|ENSG00000142609|Q9C0B2|CFAP74	49.44154591367651	0.3095138337212152	1				NaN	NaN	0	NaN	2991	3481	6467
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6484	22.758	NaN	1898.7	30	0	204.7	0.214	+			22817	KVFPERSGSG	10	64	532.2822853796544	1062.5500178261086	2	532.2822875976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVFPERSGSG_	ADCY8|p.T500Sfs*10|1|0.44|ENSG00000155897|chr8:130909849-130909850|-/TCCTTGAC|frameshift_variant;ENSG00000155897|ENST00000286355|ADCY8	35.15202426646627	0.5927656479315102	1				NaN	NaN	0	NaN	2998	3484	6483
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6485	22.762	NaN	2839.1	30	0	418.34	0.106			+	-1	RDKCITVK	8	53	510.2869637185689	1018.5593745039379	2	510.28704833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_RDKC(Carbamidomethyl (C))ITVK_	REV__ENSG00000185272|ENST00000400577|RBM11;REV__ENST00000461088.1_1_21:15588507-15593491:+|nuORF	56.72105179125745	0.5342425954139568	1				NaN	NaN	0	NaN	2999	3484	6483
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6486	22.764	NaN	5823.9	30	0	2256.7	0.106			+	8329	EAKLILKR	8	48	324.2182752325087	969.6329962977261	3	324.21820068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EAKLILKR_	REV__ENSG00000206530|ENST00000393845|CFAP44	51.33545320467046	0.5859736979383976	1				NaN	NaN	0	NaN	3000	3484	6483
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6487	22.766	NaN	2570.2	30	0	292.75	0.106			+	19391	KAMQRNKEL	9	63	559.3108554692532	1116.6071580053062	2	559.3115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KAMQRNKEL_	REV__ENST00000547358.5_1_12:56325089-56334578:+|nuORF;REV__ENST00000547535.5_1_12:56325880-56331830:+|nuORF;REV__ENST00000548479.1_1_12:56325089-56330479:+|nuORF;REV__ENST00000549097.5_1_12:56325880-56333318:+|nuORF;REV__ENST00000551296.5_1_12:56330167-56330479:+|nuORF;REV__ENST00000551615.5_1_12:56325880-56331850:+|nuORF	49.536043120802724	0.308405419312776	1				NaN	NaN	0	NaN	3001	3484	6483
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6488	22.767	NaN	1951	30	0	275.86	0.038	+			44463	TSPQAYGEQLK	11	56	611.3091066077618	NaN	0	611.3084716796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TSPQAYGEQLK_	ENSG00000181804|ENST00000316549|SLC9A9	56.632244143249146	0.2651969005282388	1				NaN	NaN	0	NaN	3002	3484	6483
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6496	22.786	NaN	58042	30	0	6604.9	0.214			+	19114	IYKVNSNGL	9	95	336.5220813004403	1006.5444145015208	3	336.5222473144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IYKVNSNGL_	REV__tr|U7SFN9|U7SFN9_FUSNULipopolysaccharideheptosyltransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02362PE=4SV=1	44.116797842482775	0.37197099687881774	1				NaN	NaN	0	NaN	3007	3487	6495
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6497	22.789	NaN	10428	30	0	862.21	0.106			+	10564	EYEVIRAK	8	76	504.2797492801575	1006.544945627115	2	504.2798767089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EYEVIRAK_	REV__ENSG00000167863|ENST00000301587|ATP5PD;REV__ENST00000580649.1_1_17:73035029-73035402:-|nuORF;REV__nc|ENSG00000167863|O75947-2|ATP5PD	74.25504064058377	0.37144338840759816	1				NaN	NaN	0	NaN	3008	3487	6495
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6498	22.791	NaN	1775.9	30	0	360.41	0.106	+			20453	KEVEKKPP	8	47	477.78447188112455	953.5543908290491	2	477.78497314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEVEKKPP_	DNAJC13|p.G1667Vfs*22|1|0.33|ENSG00000138246|chr3:132505410-132505410|A/-|frameshift_variant;DNAJC13|p.T1375Hfs*28|1|0.18|ENSG00000138246|chr3:132496626-132496626|A/-|frameshift_variant;DNAJC13|p.W1286C|1|0.47|ENSG00000138246|chr3:132494176-132494176|G/T|missense_variant;ENSG00000138246|ENST00000260818|DNAJC13	40.5726180659479	0.6527593143185008	1				NaN	NaN	0	NaN	3009	3487	6495
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6499	22.793	NaN	1594.5	30	0	138.85	0.106	+			6326	AVTEYIQRK	9	54	554.3113901091111	1106.6082272850222	2	554.3126831054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVTEYIQRK_	ENSG00000165140|ENST00000375326|FBP1;FBP1|p.G294Efs*11|1|0.11|ENSG00000165140|chr9:94603517-94603517|C/-|frameshift_variant	62.107414245175825	0.1960472003779324	1				NaN	NaN	0	NaN	3010	3487	6495
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6500	22.795	NaN	3082.3	30	0	440.02	0.106			+	17641	IEKELDEKN	9	68	559.2904519638493	NaN	0	559.2907104492188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IEKELDEKN_	REV__tr|U7SIN9|U7SIN9_FUSNUV-typeprotonATPasesubunitEOS=FusobacteriumnucleatumCTI-5OX=1316586GN=atpEPE=3SV=1	66.42927471994793	0.121898005645852	1				NaN	NaN	0	NaN	3011	3487	6495
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6501	22.797	NaN	1432.2	30	0	144.15	0.036			+	50102	WGRRRGEY	8	44	540.2776254964169	NaN	0	540.2769165039062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_WGRRRGEY_	REV__ENST00000582788.5_1_17:37872360-37873734:+|nuORF;REV__ENST00000583038.5_1_17:37872360-37881463:+|nuORF	31.954861631926434	1.7418937515398478	1				NaN	NaN	0	NaN	3012	3487	6495
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6510	22.817	NaN	11221	30	0	1487.3	0.214	+			39474	STFDTQITKK	10	74	584.8139760874092	1167.6133992416183	2	584.8142700195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STFDTQITKK_	ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC;PRKDC|p.D2437Wfs*3|1|0.11|ENSG00000253729|chr8:47840161-47840162|-/CA|frameshift_variant;PRKDC|p.K3681Nfs*6|1|0.32|ENSG00000253729|chr8:47785174-47785177|TTCT/-|frameshift_variant;PRKDC|p.M3670*|1|0.5|ENSG00000253729|chr8:47785212-47785212|T/-|frameshift_variant;PRKDC|p.M3846Cfs*12|1|0.13|ENSG00000253729|chr8:47779047-47779047|T/-|frameshift_variant;PRKDC|p.M4020Cfs*2|1|0.31|ENSG00000253729|chr8:47776968-47776968|T/-|frameshift_variant;PRKDC|p.N3605Kfs*3|1|0.22|ENSG00000253729|chr8:47788993-47788994|-/T|frameshift_variant;PRKDC|p.N4037Ifs*15|1|0.17|ENSG00000253729|chr8:47776916-47776916|T/-|frameshift_variant;PRKDC|p.R2704Gfs*13|2|0.34|ENSG00000253729|chr8:47834238-47834238|T/-|frameshift_variant;PRKDC|p.S3402Ifs*16|1|0.04|ENSG00000253729|chr8:47799302-47799303|-/AAACCGTGAGTTAGAGGAGGTAA|frameshift_variant;PRKDC|p.S4099Qfs*6|1|0.25|ENSG00000253729|chr8:47774265-47774265|A/-|frameshift_variant;PRKDC|p.T3268Pfs*7|1|0.5|ENSG00000253729|chr8:47803426-47803426|T/-|frameshift_variant;PRKDC|p.W3401Cfs*4|1|0.01|ENSG00000253729|chr8:47799304-47799305|-/AATGAATA|frameshift_variant	155.5333702123263	0.007513046059728936	1				NaN	NaN	0	NaN	3018	3490	6509
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6511	22.82	NaN	2141.6	30	0	405.18	0.106				-1	 	0	45	384.77206107446415	767.5295692157283	2	384.7718505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	3019	3490	6509
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6512	22.822	NaN	2975.8	30	0	1059.3	0.106	+			14237	GSSSSTFIK	9	46	457.2346143996973	912.4546758661946	2	457.2344055175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GSSSSTFIK_	ENSG00000134853|ENST00000257290|PDGFRA	67.49366992349736	0.1516260258713357	1				NaN	NaN	0	NaN	3020	3490	6509
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6513	22.824	NaN	3018.4	30	0	623.34	0.106			+	44076	TPSVRPLK	8	54	449.27946304258484	896.5443731519697	2	449.279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TPSVRPLK_	REV__ENST00000372114.3_2_20:45315726-45315759:-|nuORF	65.80317337860623	0.44433089765398776	1				NaN	NaN	0	NaN	3021	3490	6509
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6514	22.826	NaN	2931.5	30	0	1540.9	0.106			+	47005	VKVEASSPL	9	47	465.26832325321175	NaN	0	465.26824951171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VKVEASSPL_	REV__ENST00000476708.1_1_9:93564254-93564314:+|nuORF	49.44154591367651	0.21054156626303966	1				NaN	NaN	0	NaN	3022	3490	6509
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6515	22.828	NaN	2502.4	30	0	1590.7	0.106			+	14030	GSGGVAGLKV	10	33	422.7480644153589	843.4815758975178	2	422.7478332519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GSGGVAGLKV_	REV__ENSG00000070061|ENST00000374647|ELP1	27.882242232435846	0.6521336255503853	1				NaN	NaN	0	NaN	3023	3490	6509
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6516	22.83	NaN	1789.3	30	0	666.7	0.033	+			50528	YAPSGRSL	8	50	425.7245119513102	849.4344709694204	2	425.7238464355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YAPSGRSL_	ENSG00000163874|ENST00000373087|ZC3H12A;ZC3H12A|p.P532Qfs*41|1|0.51|ENSG00000163874|chr1:37483402-37483402|C/-|frameshift_variant	32.81241826257853	0.7059802730411993	1				NaN	NaN	0	NaN	3024	3490	6509
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6527	22.855	NaN	1905.4	30	0	252.18	0.214	+			46645	VGDPGQRTL	9	55	471.7538290523593	941.4931051715187	2	471.75390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VGDPGQRTL_	ARID1A|p.F2141Sfs*59|5|0.26|ENSG00000117713|chr1:26780313-26780313|C/-|frameshift_variant;ARID1A|p.P2114Rfs*21|1|0.46|ENSG00000117713|chr1:26780236-26780236|C/-|frameshift_variant;ARID1A|p.V2244Gfs*34|1|0.31|ENSG00000117713|chr1:26780626-26780627|-/G|frameshift_variant;ENSG00000117713|ENST00000324856|ARID1A;nc|ENSG00000117713|O14497-2|ARID1A;nc|ENSG00000117713|O14497-3|ARID1A	35.15202426646627	0.4747332964206883	1				NaN	NaN	0	NaN	3032	3493	6526
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6528	22.858	NaN	1458.7	30	0	179.12	0.035	+			36305	SESAQSKML	9	47	490.73901271698014	979.4634725007603	2	490.7388610839844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SESAQSKML_	ENSG00000179344|ENST00000434651|HLA-DQB1;ENSG00000196126|ENST00000360004|HLA-DRB1;ENSG00000198502|ENST00000374975|HLA-DRB5;ENSG00000232629|ENST00000437316|HLA-DQB2;ENST00000487676.1_1_6:32628015-32629319:-|nuORF;nc|ENSG00000179344|P01920|HLA-DQB1;nc|ENSG00000232629|P05538|HLA-DQB2	38.753607047826485	0.4348790777924195	1				NaN	NaN	0	NaN	3033	3493	6526
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6540	22.884	NaN	6192.5	30	0	1353.8	0.214	+			1388	AEVLNKHSL	9	66	505.7851923542762	1009.5558317753524	2	505.7851257324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEVLNKHSL_	ENSG00000099783|ENST00000325495|HNRNPM;ENST00000597813.5_1_19:8528492-8528615:+|nuORF;HNRNPM|p.M346Wfs*22|1|0.25|ENSG00000099783|chr19:8473699-8473699|A/-|frameshift_variant;nc|ENSG00000099783|P52272-2|HNRNPM	65.46538089061403	0.16805504838372562	1				NaN	NaN	0	NaN	3042	3496	6539
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6541	22.888	NaN	5976	30	0	921.57	0.106	+			3586	ASVGYAVTK	9	61	448.24766108080945	894.4807692284189	2	448.24749755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASVGYAVTK_	ENSG00000180198|ENST00000683442|RCC1;nc|ENSG00000180198|P18754-2|RCC1	104.01359247289065	0.03510646158778409	1				NaN	NaN	0	NaN	3043	3496	6539
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6542	22.89	NaN	3463.6	30	0	279.39	0.106	+			41617	SVQLSITKK	9	64	502.3109202039927	1002.6072874747854	2	502.31072998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVQLSITKK_	ENST00000415531.5_1_1:35496252-35497220:-|nuORF	63.53385203322761	0.18415635464017938	1				NaN	NaN	0	NaN	3044	3496	6539
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6543	22.891	NaN	3442.3	30	0	527.13	0.106				-1	 	0	51	323.2014362675132	644.3883196018264	2	323.201416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	3045	3496	6539
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6544	22.893	NaN	1597.4	30	0	156.27	0.106			+	46650	VGDPRPSSK	9	42	471.7535095214844	NaN	0	471.7535095214844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VGDPRPSSK_	REV__ENSG00000183347|ENST00000370456|GBP6;REV__GBP6|p.N587Kfs*2|1|0.28|ENSG00000183347|chr1:89385321-89385322|-/A|frameshift_variant;REV__GBP6|p.N587Mfs*18|2|0.17|ENSG00000183347|chr1:89385322-89385322|A/-|frameshift_variant	23.52269567125451	0.3573684076213556	1				NaN	NaN	0	NaN	3046	3496	6539
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6545	22.895	NaN	1745.7	30	0	179.51	0.106	+			36363	SETAVAKNQAL	11	58	566.3033640947427	1130.5921752562854	2	566.3046264648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SETAVAKNQAL_	ENSG00000131473|ENST00000352035|ACLY;nc|ENSG00000131473|P53396-2|ACLY;nc|ENSG00000131473|P53396-3|ACLY	72.2432373244024	0.21703855426835802	1				NaN	NaN	0	NaN	3047	3496	6539
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6546	22.897	NaN	2933.3	30	0	455.93	0.037	+			46322	VEKKGEKLIL	10	59	578.8685065818823	NaN	0	578.8692016601562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VEKKGEKLIL_	ENSG00000130638|ENST00000252934|ATXN10;nc|ENSG00000130638|Q9UBB4-2|ATXN10	67.49366992349736	0.17308373824428946	1				NaN	NaN	0	NaN	3048	3496	6539
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6558	22.922	NaN	2168.7	30	0	553.25	0.214	+			8007	DTLLHSFQV	9	57	530.27547131394	1058.5363896946799	2	530.2760620117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DTLLHSFQV_	ENSG00000172890|ENST00000319023|NADSYN1;ENST00000524949.5_1_11:71164342-71175189:+|nuORF;ENST00000525245.1_1_11:71164408-71171979:+|nuORF;ENST00000527538.5_1_11:71164342-71170844:+|nuORF;ENST00000533769.5_1_11:71164342-71177788:+|nuORF;NADSYN1|p.G189Afs*28|1|0.09|ENSG00000172890|chr11:71473584-71473584|G/-|frameshift_variant	49.536043120802724	0.308405419312776	1				NaN	NaN	0	NaN	3057	3499	6557
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6559	22.926	NaN	3297.6	30	0	1316.3	0.106	+			31619	QMCEVPVNTP	10	51	559.2564356726497	1116.4983184120993	2	559.2569580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QMCEVPVNTP_	DIS3L|p.M446V|1|0.25|ENSG00000166938|chr15:66322696-66322696|A/G|missense_variant	30.317721548370564	0.6322445173429027	1				NaN	NaN	0	NaN	3058	3499	6557
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6560	22.928	NaN	2159.9	30	0	317.04	0.106	+			14158	GSNAFISQK	9	56	476.2483080322208	950.4820631312416	2	476.2481994628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GSNAFISQK_	ENSG00000129315|ENST00000261900|CCNT1	58.2462437865262	0.22823408064396822	1				NaN	NaN	0	NaN	3059	3499	6557
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6561	22.93	NaN	1335.2	30	0	608.08	0.106	+			30143	PSAGRTELA	9	39	451.2403188383761	NaN	0	451.24029541015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PSAGRTELA_	ENST00000521401.1_1_7:27150342-27166549:-|nuORF	25.57405402267927	0.3484490411150625	1				NaN	NaN	0	NaN	3060	3499	6557
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6562	22.931	NaN	1483.7	30	0	274.29	0.106	+			29592	PFPRACQPGGA	11	43	550.7714348603326	NaN	0	550.770263671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PFPRACQPGGA_	ENST00000484256.1_1_22:29191541-29191667:-|nuORF	25.57405402267927	0.45144328854727944	1				NaN	NaN	0	NaN	3061	3499	6557
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6563	22.933	NaN	1507.8	30	0	189.09	0.034			+	2360	ANAFVRRP	8	51	465.768374703455	NaN	0	465.7666015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ANAFVRRP_	REV__ENSG00000156475|ENST00000394411|PPP2R2B;REV__nc|ENSG00000156475|Q00005-2|PPP2R2B;REV__nc|ENSG00000156475|Q00005-3|PPP2R2B;REV__nc|ENSG00000156475|Q00005-4|PPP2R2B;REV__nc|ENSG00000156475|Q00005-5|PPP2R2B;REV__nc|ENSG00000156475|Q00005-6|PPP2R2B;REV__nc|ENSG00000156475|Q00005-7|PPP2R2B;REV__PPP2R2B|p.G397Afs*31|1|0.1|ENSG00000156475|chr5:146590089-146590089|C/-|frameshift_variant;REV__PPP2R2B|p.T173I|1|0.11|ENSG00000156475|chr5:146650654-146650654|G/A|missense_variant	31.954861631926434	1.7418937515398478	1				NaN	NaN	0	NaN	3062	3499	6557
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6569	22.949	NaN	6201.8	30	0	1344.5	0.214	+			17646	IEKFDKSKL	9	72	554.3237030871172	1106.6328532410344	2	554.3247680664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IEKFDKSKL_	ENSG00000154620|ENST00000284856|TMSB4Y;ENSG00000205542|ENST00000451311|TMSB4X;ENST00000323496.5_1_9:131104444-131104642:+|nuORF;TMSB4X|p.A8V|1|0.09|ENSG00000205542|chrX:12976284-12976284|C/T|missense_variant	126.02560380233024	0.017552010790603426	1				NaN	NaN	0	NaN	3065	3502	6568
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6570	22.953	NaN	1993.1	30	0	276.32	0.106	+			4498	ATITERGITSR	11	68	602.8361308079125	1203.6577086826248	2	602.8359985351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATITERGITSR_	EMC1|p.F974Lfs*4|1|0.22|ENSG00000127463|chr1:19219363-19219363|A/-|frameshift_variant;ENSG00000127463|ENST00000477853|EMC1;nc|ENSG00000127463|Q8N766-2|EMC1;nc|ENSG00000127463|Q8N766-3|EMC1;nc|ENSG00000127463|Q8N766-4|EMC1	51.72707519102574	0.3974808554116684	1				NaN	NaN	0	NaN	3066	3502	6568
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6571	22.955	NaN	934.12	30	0	112.56	0.106				-1	TNEEPLPKK	9	39	549.2955353319427	1096.5765177306853	2	549.2968139648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))TNEEPLPKK_	ENSG00000146457|ENST00000621533|WTAP;ENST00000494513.1_1_6:160148641-160157384:+|nuORF;nc|ENSG00000146457|Q15007-2|WTAP	41.42661286455405	0.403525789677298	1				NaN	NaN	0	NaN	3067	3502	6568
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6572	22.957	NaN	1102.4	30	0	132.54	0.034			+	9669	ELTQDKAL	8	42	459.25083821948095	916.4871235057619	2	459.7521057128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ELTQDKAL_	REV__URB1|p.N1002K|1|0.4|ENSG00000142207|chr21:32349310-32349310|A/C|missense_variant	34.172542307311794	0.6954784234644539	1				NaN	NaN	0	NaN	3068	3502	6568
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6578	22.973	NaN	13937	30	0	1937.5	0.214	+			12918	GESHVSGTTTL	11	69	544.7643915186161	1087.514230104032	2	544.7650146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GESHVSGTTTL_	ENSG00000124422|ENST00000261497|USP22;ENST00000478443.1_1_17:20910195-20914666:-|nuORF;nc|ENSG00000124422|Q9UPT9-2|USP22	112.41091882917199	0.03502930040608075	1				NaN	NaN	0	NaN	3071	3505	6577
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6579	22.977	NaN	8705.2	30	0	1063.2	0.106	+			4502	ATITKVLQK	9	67	501.3213143001112	1000.6280756670225	2	501.3211975097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATITKVLQK_	ENSG00000130589|ENST00000467148|HELZ2;HELZ2|p.D1312G|1|0.12|ENSG00000130589|chr20:63564887-63564887|T/C|missense_variant;HELZ2|p.G2213Vfs*22|1|0.14|ENSG00000130589|chr20:63561876-63561876|C/-|frameshift_variant;HELZ2|p.R2206Vfs*29|2|0.28|ENSG00000130589|chr20:63561898-63561898|G/-|frameshift_variant;nc|ENSG00000130589|Q9BYK8-2|HELZ2;nc|ENSG00000130589|Q9BYK8|HELZ2	200.15690381979954	3.265422741743988E-05	1				NaN	NaN	0	NaN	3072	3505	6577
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6580	22.979	NaN	4795.3	30	0	475.82	0.106	+			12520	GEFEKKYVA	9	71	535.7797866153105	1069.545020297421	2	535.7802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEFEKKYVA_	ENSG00000132341|ENST00000543796|RAN	77.31757898189308	0.1091473830098891	1				NaN	NaN	0	NaN	3073	3505	6577
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6581	22.98	NaN	1631.8	30	0	213.67	0.106	+			1277	AESKGVVKF	9	54	482.77654516433506	963.5385373954701	2	482.7764892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AESKGVVKF_	ENSG00000064651|ENST00000262461|SLC12A2;nc|ENSG00000064651|P55011-3|SLC12A2;SLC12A2|p.E1119Rfs*7|1|0.47|ENSG00000064651|chr5:128184417-128184418|-/A|frameshift_variant;SLC12A2|p.F466Lfs*59|1|0.11|ENSG00000064651|chr5:128135793-128135793|T/-|frameshift_variant;SLC12A2|p.P1171Sfs*18|1|0.38|ENSG00000064651|chr5:128186498-128186499|-/TC|frameshift_variant	79.71258880314673	0.09879134589249085	1				NaN	NaN	0	NaN	3074	3505	6577
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6582	22.982	NaN	5638.7	30	0	1471.5	0.106	+			43210	TEVKKIYKL	9	73	561.3497161384183	1120.6848793436366	2	561.3505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TEVKKIYKL_	ENSG00000144034|ENST00000272424|TPRKB;nc|ENSG00000144034|Q9Y3C4-2|TPRKB;nc|ENSG00000144034|Q9Y3C4-3|TPRKB	91.26522074875469	0.06129826844580791	1				NaN	NaN	0	NaN	3075	3505	6577
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6583	22.984	NaN	1982.3	30	0	293.88	0.106			+	7125	DAALKANDIQV	11	62	579.3113250285734	1156.6080971239467	2	579.3128051757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DAALKANDIQV_	REV__CON__A2A5Y0;REV__CON__O76014;REV__CON__O76015;REV__CON__Q14525;REV__CON__Q15323;REV__CON__Q497I4;REV__CON__Q9UE12;REV__CON__REFSEQ:XP_986630;REV__ENSG00000094796|ENST00000251645|KRT31;REV__ENSG00000108417|ENST00000225550|KRT37;REV__ENSG00000131738|ENST00000251646|KRT33B;REV__ENSG00000171360|ENST00000246646|KRT38	53.59686742100583	0.38061189074210516	1				NaN	NaN	0	NaN	3076	3505	6577
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6584	22.986	NaN	1067	30	0	93.787	0.035			+	-1	MNASEESMN	9	43	514.6852588813672	NaN	0	514.6862182617188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_MNASEESM(Oxidation (M))N_	REV__ENSG00000196620|ENST00000338206|UGT2B15;REV__ENSG00000197888|ENST00000317746|UGT2B17	25.57405402267927	0.3484490411150625	1				NaN	NaN	0	NaN	3077	3505	6577
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6595	23.009	NaN	112610	30	0	31841	0.162			+	24995	LLEQELHLL	9	96	369.8850557638905	1106.6333378918714	3	369.88507080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LLEQELHLL_	REV__ENST00000356136.7_2_11:75854004-75854214:+|nuORF	60.11826168202944	0.21262886028301267	1				NaN	NaN	0	NaN	3085	3508	6594
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6596	23.012	NaN	4015.7	30	0	704.46	0.106	+			2174	ALMGYATHK	9	61	496.25504566960234	990.4955384060047	2	496.25494384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ALMGYATHK_	ENSG00000126709|ENST00000361157|IFI6;nc|ENSG00000126709|P09912-2|IFI6;nc|ENSG00000126709|P09912-3|IFI6	69.6276240434122	0.14239879520340665	1				NaN	NaN	0	NaN	3086	3508	6594
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6597	23.014	NaN	5702.2	30	0	2068	0.106	+			12877	GERCRSLLH	9	46	357.5219175947482	1069.5439233844445	3	357.52197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GERCRSLLH_	ENSG00000013563|ENST00000369807|DNASE1L1;ENST00000497242.1_1_X:153631168-153631932:-|nuORF	23.04248740728303	0.5879033540491928	1				NaN	NaN	0	NaN	3087	3508	6594
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6598	23.016	NaN	2958	30	0	2022.2	0.106			+	17955	IGRERGGHI	9	34	332.1903357194235	993.5491777584705	3	332.19036865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IGRERGGHI_	REV__ENST00000463052.5_1_1:29543281-29549713:-|nuORF	20.94693142431847	0.6074874384046576	1				NaN	NaN	0	NaN	3088	3508	6594
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6599	23.018	NaN	5417.8	30	0	1017.2	0.106			+	10695	EYVSLLRK	8	45	336.53415449253646	1006.5806340778095	3	336.5343017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EYVSLLRK_	REV__ENSG00000154143|ENST00000284288|PANX3	19.359975847455235	0.7988239741663654	1				NaN	NaN	0	NaN	3089	3508	6594
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6600	23.019	NaN	1633.4	30	0	182.68	0.106			+	28724	NNNELFEK	8	53	504.2432668729614	1006.4719808127228	2	504.24371337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NNNELFEK_	REV__tr|U7T2P2|U7T2P2_FUSNU3-oxoacyl-[acyl-carrier-protein]synthaseIIIOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00519PE=4SV=1	44.116797842482775	0.6307669463330267	1				NaN	NaN	0	NaN	3090	3508	6594
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6601	23.021	NaN	739.54	30	0	160.52	0.034	+			7052	CTAGFFVSL	9	39	472.7327575683594	NaN	0	472.7327575683594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_CTAGFFVSL_	OR10X1|p.I171V|1|0.28|ENSG00000279111|chr1:158579389-158579389|T/C|missense_variant	53.351449002276354	0.18359631779194618	1				NaN	NaN	0	NaN	3091	3508	6594
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6607	23.037	NaN	3220	30	0	435.87	0.214	+			12230	GASEILLKK	9	61	479.7998570622879	957.5851611913758	2	479.8000793457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GASEILLKK_	ENSG00000067842|ENST00000263519|ATP2B3;nc|ENSG00000067842|Q16720-2|ATP2B3;nc|ENSG00000067842|Q16720-3|ATP2B3;nc|ENSG00000067842|Q16720-4|ATP2B3;nc|ENSG00000067842|Q16720-5|ATP2B3;nc|ENSG00000067842|Q16720-6|ATP2B3;nc|ENSG00000067842|Q16720-7|ATP2B3;nc|ENSG00000067842|Q16720-8|ATP2B3	153.03582135801034	0.006161527642367307	1				NaN	NaN	0	NaN	3094	3511	6606
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6608	23.041	NaN	6396.5	30	0	2066.5	0.106	+			18840	IVAGTLTNK	9	60	458.77658960737426	915.5386262815485	2	458.77642822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IVAGTLTNK_	DAZAP1-NDUFS7|1|fusion;ENSG00000115286|ENST00000233627|NDUFS7;ENST00000436115.6_1_19:1390815-1393403:+|nuORF;ENST00000538523.5_1_19:1387763-1393403:+|nuORF;ENST00000538662.5_1_19:1383907-1391085:+|nuORF;ENST00000543289.5_1_19:1388688-1391085:+|nuORF;ENST00000545446.5_1_19:1388688-1393403:+|nuORF;nc|ENSG00000115286|O75251-2|NDUFS7	127.46168284122857	0.016682644177004526	1				NaN	NaN	0	NaN	3095	3511	6606
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6609	23.043	NaN	1134.7	30	0	76.505	0.106	+			28549	NISIRSVEG	9	47	487.7665656451112	973.5185783570224	2	487.76641845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NISIRSVEG_	ENSG00000147689|ENST00000690554|FAM83A;ENST00000521468.1_1_8:124195447-124212099:+|nuORF;nc|ENSG00000147689|Q86UY5-2|FAM83A;nc|ENSG00000147689|Q86UY5-3|FAM83A	41.42661286455405	0.403525789677298	1				NaN	NaN	0	NaN	3096	3511	6606
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6610	23.045	NaN	589.94	30	0	207.73	0.038			+	17890	IGDLRLPLLVS	11	28	399.2505059620184	NaN	0	399.2503356933594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IGDLRLPLLVS_	REV__ENSG00000226479|ENST00000426077|TMEM185B;REV__TMEM185B|p.P341Lfs*4|3|0.55|ENSG00000226479|chr2:120221955-120221955|G/-|frameshift_variant	13.507942900623993	0.456735970842152	1				NaN	NaN	0	NaN	3097	3511	6606
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6618	23.063	NaN	3132.7	30	0	332.23	0.214				-1	INPLIYCVF	9	43	380.2044024288228	1137.5913778866684	3	380.2044677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_INPLIYC(Carbamidomethyl (C))VF_	ENSG00000187258|ENST00000360581|NPSR1;nc|ENSG00000187258|Q6W5P4-2|NPSR1;nc|ENSG00000187258|Q6W5P4-3|NPSR1;nc|ENSG00000187258|Q6W5P4-4|NPSR1;nc|ENSG00000187258|Q6W5P4-5|NPSR1	19.996771675451527	0.6112419832031292	1				NaN	NaN	0	NaN	3102	3514	6617
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6619	23.067	NaN	1683.1	30	0	443.23	0.106	+			46812	VIAKRKEDYG	10	42	589.83045106247	1177.64634919174	2	589.8310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VIAKRKEDYG_	AEBP2|p.S442Y|1|0.12|ENSG00000139154|chr12:19512423-19512423|C/A|missense_variant	18.262085536374414	0.7236521404371882	1				NaN	NaN	0	NaN	3103	3514	6617
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6620	23.068	NaN	1679.2	30	0	193.45	0.106	+			32535	QVSFRIGGGR	10	57	538.8008967097318	1075.5872404862635	2	538.8023681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QVSFRIGGGR_	ENST00000606070.1_1_6:108279748-108280261:+|nuORF	36.446750945000026	0.5818864909973037	1				NaN	NaN	0	NaN	3104	3514	6617
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6621	23.07	NaN	1485.5	30	0	634.73	0.038	+			18590	ISQAQLLFEN	10	36	388.20832721435073	1161.6031522432522	3	388.2084045410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ISQAQLLFEN_	ENSG00000108592|ENST00000427159|FTSJ3;ENST00000583202.5_1_17:61898213-61899202:-|nuORF	32.75053402867276	0.6123771875927935	1				NaN	NaN	0	NaN	3105	3514	6617
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6628	23.088	NaN	5912.6	30	0	841.7	0.214				-1	 	0	71	553.2975265552138	1104.5805001772276	2	553.29833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	3109	3517	6627
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6629	23.092	NaN	2964	30	0	346.45	0.106	+			15715	GVQLSITKK	9	60	487.3053032288836	972.5960535245672	2	487.30523681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GVQLSITKK_	ENST00000357182.8_1_1:35496249-35497473:-|nuORF;ENST00000373333.1_1_1:35496252-35497272:-|nuORF	82.7504851949679	0.08565546331141553	1				NaN	NaN	0	NaN	3110	3517	6627
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6630	23.094	NaN	1071.5	30	0	168.21	0.035				-1	KKEIMEKL	8	44	517.8003248857733	NaN	0	517.798828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_KKEIM(Oxidation (M))EKL_	tr|U7SUD6|U7SUD6_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01114PE=4SV=1	38.80614096846853	1.7418937515398478	1				NaN	NaN	0	NaN	3111	3517	6627
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6637	23.112	NaN	6470.7	30	0	3512	0.214			+	22026	KSHLFDSQI	9	49	358.8573523390677	1073.5502276174032	3	358.857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSHLFDSQI_	REV__ENSG00000047849|ENST00000683076|MAP4;REV__MAP4|p.R919Gfs*14|1|0.44|ENSG00000047849|chr3:47870917-47870917|G/-|frameshift_variant;REV__MAP4|p.T960Qfs*35|1|0.3|ENSG00000047849|chr3:47869309-47869309|T/-|frameshift_variant;REV__MAP4|p.V999*|1|0.25|ENSG00000047849|chr3:47867318-47867318|T/-|frameshift_variant;REV__nc|ENSG00000047849|P27816-4|MAP4	19.996771675451527	0.6112419832031292	1				NaN	NaN	0	NaN	3115	3520	6636
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6638	23.115	NaN	7108.8	30	0	654.38	0.106	+			39904	STLTYRMTK	9	73	550.7914968528399	1099.5684407724798	2	550.7925415039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STLTYRMTK_	ENST00000446662.5_1_16:22466144-22470768:+|nuORF;ENST00000522841.6_1_16:21490806-21495758:-|nuORF	159.27591364854348	0.004707062175358555	1				NaN	NaN	0	NaN	3116	3520	6636
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6639	23.117	NaN	2054.7	30	0	297.76	0.106			+	31506	QLETVKSQI	9	58	523.2979139294063	1044.5812749256124	2	523.2982788085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QLETVKSQI_	REV__ENSG00000052344|ENST00000317508|PRSS8;REV__nc|ENSG00000052344|Q16651-2|PRSS8;REV__PRSS8|p.Q295Kfs*27|1|0.32|ENSG00000052344|chr16:31132158-31132158|G/-|frameshift_variant	72.87924865735499	0.12833875048249987	1				NaN	NaN	0	NaN	3117	3520	6636
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6640	23.119	NaN	2447.1	30	0	435.89	0.106				-1	LSRPGAMAA	9	55	445.23175313767115	888.4489533421423	2	445.2317199707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_LSRPGAM(Oxidation (M))AA_	ENST00000476284.1_1_22:50964673-50968379:-|nuORF	37.15910966729921	0.4535818937225704	1				NaN	NaN	0	NaN	3118	3520	6636
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6641	23.121	NaN	2684.8	30	0	390	0.106	+			49391	VVTEHLINK	9	69	526.8084423833832	1051.6023318335663	2	526.8082885742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVTEHLINK_	ENSG00000036257|ENST00000264414|CUL3;nc|ENSG00000036257|Q13618-2|CUL3	126.24258497203832	0.01742065577488747	1				NaN	NaN	0	NaN	3119	3520	6636
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6642	23.123	NaN	855.75	30	0	237.61	0.106			+	-1	LTTPLHMPG	9	28	328.1720774489913	NaN	0	328.17205810546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_LTTPLHM(Oxidation (M))PG_	REV__ENST00000371227.8_1_10:97250793-97250874:-|nuORF	27.882242232435846	0.3367954786602879	1				NaN	NaN	0	NaN	3120	3520	6636
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6643	23.125	NaN	1453.8	30	0	282.55	0.039			+	-1	YEFPVMVFGIA	11	39	644.8166374243314	1287.6187219154626	2	644.8157348632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_YEFPVM(Oxidation (M))VFGIA_	REV__EDNRA|p.R340Yfs*22|1|0.07|ENSG00000151617|chr4:147539933-147539934|-/TA|frameshift_variant;REV__ENSG00000151617|ENST00000651419|EDNRA	26.69291269510374	0.70980431218767	1				NaN	NaN	0	NaN	3121	3520	6636
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6655	23.151	NaN	6206	30	0	1066.4	0.214	+			15164	GTSGLILKR	9	56	472.7978382730809	943.5811236129618	2	472.7976989746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTSGLILKR_	ENSG00000137825|ENST00000260386|ITPKA;ITPKA|p.K290Vfs*10|1|0.3|ENSG00000137825|chr15:41502054-41502055|-/ATGT|frameshift_variant;ITPKA|p.S212L|1|0.18|ENSG00000137825|chr15:41501683-41501683|C/T|missense_variant	75.04331003522576	0.118981335847003	1				NaN	NaN	0	NaN	3130	3523	6654
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6656	23.154	NaN	3346	30	0	452.34	0.106	+			8846	EENSHLTSV	9	59	508.23810317768056	1014.4616534221611	2	508.73974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EENSHLTSV_	ENSG00000157557|ENST00000360938|ETS2	71.87747018426188	0.13267044672804276	1				NaN	NaN	0	NaN	3131	3523	6654
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6657	23.156	NaN	1324.9	30	0	201.23	0.106	+			28406	NESKHVMQL	9	56	543.27392578125	NaN	0	543.27392578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NESKHVMQL_	ARID2|p.L293*|1|0.3|ENSG00000189079|chr12:45836843-45836843|T/-|frameshift_variant;ARID2|p.L370Ffs*18|1|0.33|ENSG00000189079|chr12:45837401-45837402|-/T|frameshift_variant;ARID2|p.N1778Ifs*13|1|0.15|ENSG00000189079|chr12:45893686-45893686|A/-|frameshift_variant;ARID2|p.P851Hfs*4|1|0.36|ENSG00000189079|chr12:45850671-45850671|C/-|frameshift_variant;ARID2|p.Q686Hfs*19|1|0.04|ENSG00000189079|chr12:45850180-45850181|-/TGAAATGACTG|frameshift_variant;ARID2|p.S218Pfs*74|1|0.26|ENSG00000189079|chr12:45821431-45821431|T/-|frameshift_variant;ENSG00000189079|ENST00000334344|ARID2;nc|ENSG00000189079|Q68CP9-3|ARID2	47.657333605630114	0.2228375344433429	1				NaN	NaN	0	NaN	3132	3523	6654
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6658	23.158	NaN	1913.8	30	0	175.96	0.106	+			6917	CMEVLEALY	9	53	535.7487660034	1069.4829790735998	2	536.2496948242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_CMEVLEALY_	ENSG00000164134|ENST00000296543|NAA15	31.954861631926434	0.5046124803899898	1				NaN	NaN	0	NaN	3133	3523	6654
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6659	23.16	NaN	1610	30	0	296.59	0.106	+			42952	TEIVMPTPK	9	54	516.2775318276937	1030.5405107221873	2	516.2783813476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_TEIVM(Oxidation (M))PTPK_	ENSG00000147255|ENST00000361420|IGSF1;IGSF1|p.H803Tfs*4|1|0.66|ENSG00000147255|chrX:131277140-131277140|G/-|frameshift_variant;nc|ENSG00000147255|Q8N6C5-2|IGSF1;nc|ENSG00000147255|Q8N6C5-4|IGSF1	52.936696900407355	0.27249468807391813	1				NaN	NaN	0	NaN	3134	3523	6654
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6660	23.162	NaN	1400.6	30	0	197.79	0.106	+			14719	GTINIVHPK	9	51	489.78967914392877	NaN	0	489.7898864746094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTINIVHPK_	ENSG00000135069|ENST00000376588|PSAT1;nc|ENSG00000135069|Q9Y617-2|PSAT1	54.722347961057174	0.17414871455573902	1				NaN	NaN	0	NaN	3135	3523	6654
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6661	23.164	NaN	1383.3	30	0	152.43	0.036			+	545	ADELFGYHL	9	49	532.7557135472885	NaN	0	532.7548828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ADELFGYHL_	REV__ENSG00000162949|ENST00000295055|CAPN13;REV__nc|ENSG00000162949|Q6MZZ7-2|CAPN13	23.04248740728303	0.3589936788096251	1				NaN	NaN	0	NaN	3136	3523	6654
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6671	23.187	NaN	23572	30	0	11732	0.214				-1	 	0	57	384.7720625920663	767.5295722509326	2	384.7720031738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	3143	3526	6670
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6672	23.191	NaN	1639.4	30	0	221.61	0.106			+	20927	KKAAVAAK	8	43	393.76318359375	NaN	0	393.76318359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KKAAVAAK_	REV__ENSG00000278053|ENST00000617633|DDX52	19.359975847455235	1.7418937515398478	1				NaN	NaN	0	NaN	3144	3526	6670
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6673	23.193	NaN	2080.8	30	0	479.67	0.106	+			4487	ATITDKELLKK	11	58	630.3821117418445	1258.7496705504889	2	630.3823852539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATITDKELLKK_	ENSG00000131503|ENST00000360839|ANKHD1;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	69.2159832094219	0.24227581199444026	1				NaN	NaN	0	NaN	3145	3526	6670
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6674	23.194	NaN	2015.8	30	0	249.55	0.106	+			37542	SLLTVHQRIH	10	56	602.3504216127191	1202.686290292238	2	602.3504638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLLTVHQRIH_	ENSG00000197608|ENST00000594440|ZNF841;nc|ENSG00000197608|Q6ZN19|ZNF841	68.84614121027924	0.2867470276772903	1				NaN	NaN	0	NaN	3146	3526	6670
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6675	23.196	NaN	1674.9	30	0	485.01	0.106				-1	 	0	41	328.7093147162635	655.4040764993271	2	328.7093811035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	3147	3526	6670
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6676	23.198	NaN	1499.6	30	0	276.62	0.106	+			50117	WHLLGDQTL	9	48	541.7839175599784	NaN	0	541.784423828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_WHLLGDQTL_	ENSG00000130714|ENST00000402686|POMT1;ENST00000462375.5_1_9:134384326-134385572:+|nuORF;nc|ENSG00000130714|Q9Y6A1-3|POMT1;nc|ENSG00000130714|Q9Y6A1-4|POMT1;nc|ENSG00000130714|Q9Y6A1|POMT1;POMT1|p.L421*|1|0.41|ENSG00000130714|chr9:131515440-131515440|C/-|frameshift_variant	30.317721548370564	0.32449924987115025	1				NaN	NaN	0	NaN	3148	3526	6670
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6677	23.2	NaN	1784.7	30	0	392.8	0.037				-1	CDPAQPETFP	10	50	581.2489322580614	NaN	0	581.2492065429688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_C(Carbamidomethyl (C))DPAQPETFP_	ENSG00000140400|ENST00000267978|MAN2C1;ENST00000563441.5_1_15:75651254-75660924:-|nuORF;ENST00000565699.1_1_15:75656274-75656948:-|nuORF;MAN2C1|p.G331Afs*17|2|0.14|ENSG00000140400|chr15:75362359-75362359|C/-|frameshift_variant;MAN2C1|p.V752Cfs*60|1|0.43|ENSG00000140400|chr15:75358611-75358611|C/-|frameshift_variant;nc|ENSG00000140400|Q9NTJ4-2|MAN2C1;nc|ENSG00000140400|Q9NTJ4-4|MAN2C1	36.446750945000026	0.3805027428805705	1				NaN	NaN	0	NaN	3149	3526	6670
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6688	23.226	NaN	1829.6	30	0	164.25	0.214	+			12778	GELSKVTKV	9	59	480.78948974609375	NaN	0	480.78948974609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GELSKVTKV_	ENSG00000119421|ENST00000373768|NDUFA8	61.691277971877994	0.14210560126578747	1				NaN	NaN	0	NaN	3157	3529	6687
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6689	23.229	NaN	1801.8	30	0	371.56	0.106			+	47100	VLLGHRNW	8	54	497.7819155353526	993.5492781375052	2	497.7820739746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VLLGHRNW_	REV__chr20:35280829-35284184|119|13.38|0.55|4.6|-|2|EIF6,None|1	37.028477286268924	0.6747514403204248	1				NaN	NaN	0	NaN	3158	3529	6687
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6690	23.231	NaN	1933.8	30	0	259.72	0.106			+	-1	SLGTIRYGMNL	11	47	414.21589961410194	NaN	0	414.21551513671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_SLGTIRYGM(Oxidation (M))NL_	REV__ENSG00000142784|ENST00000319394|WDTC1;REV__nc|ENSG00000142784|Q8N5D0-4|WDTC1	35.17822180527639	0.40864158092774266	1				NaN	NaN	0	NaN	3159	3529	6687
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6691	23.233	NaN	2484.5	30	0	165.54	0.106	+			42930	TEIKKTEVL	9	66	530.8163315905311	1059.6181102478622	2	530.8169555664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TEIKKTEVL_	ENSG00000175792|ENST00000322623|RUVBL1;nc|ENSG00000175792|Q9Y265-2|RUVBL1	54.722347961057174	0.257609425301511	1				NaN	NaN	0	NaN	3160	3529	6687
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6692	23.235	NaN	1365.3	30	0	248.92	0.106			+	-1	EMAESLSQE	9	43	520.216796875	NaN	0	520.216796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_EM(Oxidation (M))AESLSQE_	REV__CNTROB|p.L713Cfs*27|1|0.4|ENSG00000170037|chr17:7947710-7947710|T/-|frameshift_variant;REV__ENSG00000170037|ENST00000563694|CNTROB;REV__ENST00000571632.5_1_17:7838298-7849136:+|nuORF;REV__nc|ENSG00000170037|Q8N137-2|CNTROB;REV__nc|ENSG00000170037|Q8N137-3|CNTROB;REV__nc|ENSG00000170037|Q8N137-4|CNTROB;REV__nc|ENSG00000170037|Q8N137-5|CNTROB	35.15202426646627	0.3000918603816441	1				NaN	NaN	0	NaN	3161	3529	6687
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6693	23.237	NaN	2288	30	0	953.38	0.106			+	45209	TVNSGENVTV	10	38	340.5049687837302	NaN	0	340.5048522949219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TVNSGENVTV_	REV__ENSG00000185565|ENST00000490035|LSAMP	26.063383197487333	0.4145965855542893	1				NaN	NaN	0	NaN	3162	3529	6687
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6694	23.238	NaN	2703.5	30	0	570.76	0.034			+	1546	AGEESRPAI	9	46	465.23764791808014	928.4607429029603	2	465.23779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AGEESRPAI_	REV__ENSG00000176182|ENST00000322217|MYPOP	42.396135135203025	0.392153681582562	1				NaN	NaN	0	NaN	3163	3529	6687
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6706	23.264	NaN	6117.3	30	0	1172.2	0.214	+			3670	ASYTKIVVK	9	64	504.8079532157261	1007.6013534982523	2	504.8081359863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASYTKIVVK_	ENSG00000141252|ENST00000437048|VPS53;ENST00000541903.6_1_17:422370-426182:-|nuORF	148.6902309647307	0.00717441509122429	1				NaN	NaN	0	NaN	3172	3532	6705
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6707	23.268	NaN	4289.6	30	0	1009.3	0.106			+	27303	MGSSFSSVGA	10	58	465.2051569852741	928.3957610373482	2	465.20501708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MGSSFSSVGA_	REV__nc|ENSG00000187905|Q6ZQY2-2|LRRC74B	71.87747018426188	0.26198133118427214	1				NaN	NaN	0	NaN	3173	3532	6705
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6708	23.27	NaN	1935.3	30	0	271.38	0.106	+			37078	SISDKLDRQR	10	68	609.3327985171395	1216.651044101079	2	609.3330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SISDKLDRQR_	ENSG00000083067|ENST00000677713|TRPM3;nc|ENSG00000083067|Q9HCF6-11|TRPM3;nc|ENSG00000083067|Q9HCF6-2|TRPM3;nc|ENSG00000083067|Q9HCF6-4|TRPM3;nc|ENSG00000083067|Q9HCF6-5|TRPM3;nc|ENSG00000083067|Q9HCF6-6|TRPM3;nc|ENSG00000083067|Q9HCF6-7|TRPM3;nc|ENSG00000083067|Q9HCF6-8|TRPM3;nc|ENSG00000083067|Q9HCF6|TRPM3	51.19269402634007	0.44601001148513897	1				NaN	NaN	0	NaN	3174	3532	6705
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6709	23.272	NaN	1095.1	30	0	112.97	0.106	+			24372	LFRFVGLQ	8	52	490.2888697369431	978.5631865406863	2	490.2880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LFRFVGLQ_	ENST00000262995.8_1_4:144258139-144258352:+|nuORF	40.5726180659479	0.6527593143185008	1				NaN	NaN	0	NaN	3175	3532	6705
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6710	23.274	NaN	3288.6	30	0	658.26	0.106	+			49146	VVMENVGQQK	10	64	566.2946807838063	1130.5748086344124	2	566.2952270507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVMENVGQQK_	ENSG00000004700|ENST00000444129|RECQL	104.01359247289065	0.06577755598965461	1				NaN	NaN	0	NaN	3176	3532	6705
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6711	23.275	NaN	1423.5	30	0	371.08	0.036				-1	TDLLMNTML	9	45	542.2572021484375	NaN	0	542.2572021484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Oxidation (M)	_TDLLM(Oxidation (M))NTM(Oxidation (M))L_	ENSG00000138378|ENST00000392320|STAT4;ENST00000495849.5_1_2:191897681-192012929:-|nuORF	27.882242232435846	0.3367954786602879	1				NaN	NaN	0	NaN	3177	3532	6705
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6724	23.303	NaN	5949.9	30	0	580.42	0.214	+			48012	VSQVGKEL	8	61	430.24770919560586	858.4808654580117	2	430.24749755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSQVGKEL_	ENSG00000168209|ENST00000307365|DDIT4	132.757866228626	0.23138309008778796	1				NaN	NaN	0	NaN	3187	3535	6723
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6725	23.307	NaN	2737.2	30	0	393.27	0.106	+			35839	SEDEPTRSL	9	63	517.243306530936	1032.472060128672	2	517.2437133789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEDEPTRSL_	ENSG00000083312|ENST00000337273|TNPO1;ENSG00000105576|ENST00000425528|TNPO2;ENST00000588484.1_1_19:12826020-12830096:-|nuORF;ENST00000589956.5_1_19:12822112-12831764:-|nuORF;nc|ENSG00000083312|Q92973-2|TNPO1;nc|ENSG00000105576|O14787-2|TNPO2;TNPO1|p.C844Vfs*45|4|0.31|ENSG00000083312|chr5:72903718-72903718|T/-|frameshift_variant;TNPO2|p.H347Pfs*4|1|0.35|ENSG00000105576|chr19:12711373-12711374|-/G|frameshift_variant	65.46538089061403	0.16805504838372562	1				NaN	NaN	0	NaN	3188	3535	6723
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6726	23.309	NaN	2608.2	30	0	800.73	0.106			+	34647	RVQGGFQLL	9	56	509.2955991699795	1016.576645406759	2	509.29583740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RVQGGFQLL_	REV__ENSG00000105550|ENST00000593756|FGF21	45.97224482568171	0.3502073465782774	1				NaN	NaN	0	NaN	3189	3535	6723
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6727	23.311	NaN	1280.9	30	0	213.76	0.106	+			30375	PVLNSHLM	8	40	455.74470243144384	909.4748519296877	2	455.7444152832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PVLNSHLM_	ENST00000425630.1_1_10:1205876-1208503:+|nuORF;ENST00000583117.1_1_10:1205876-1206669:+|nuORF	47.91560031466742	0.6071945918984287	1				NaN	NaN	0	NaN	3190	3535	6723
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6728	23.312	NaN	1710.9	30	0	197.05	0.106	+			41382	SVMKSFIKR	9	52	548.320158640481	1094.625764347762	2	548.3203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVMKSFIKR_	ENSG00000149503|ENST00000394818|INCENP;ENST00000528375.1_1_11:61905314-61909007:+|nuORF;nc|ENSG00000149503|Q9NQS7-2|INCENP	30.317721548370564	0.5199124245378496	1				NaN	NaN	0	NaN	3191	3535	6723
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6729	23.314	NaN	609.18	30	0	77.286	0.034	+			1575	AGIASSSIAAK	11	37	488.2768061778196	NaN	0	488.2767333984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AGIASSSIAAK_	ENSG00000165949|ENST00000612813|IFI27;nc|ENSG00000165949|P40305-1|IFI27;nc|ENSG00000165949|P40305-3|IFI27;nc|ENSG00000165949|P40305-4|IFI27	33.921630207806714	0.41424167740351664	1				NaN	NaN	0	NaN	3192	3535	6723
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6741	23.34	NaN	3195.3	30	0	1782.2	0.214			+	31814	QPPTPRAI	8	43	440.2557597221357	878.4969665110714	2	440.2558898925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QPPTPRAI_	REV__ENSG00000204463|ENST00000676615|BAG6;REV__ENST00000465348.5_1_6:31610527-31611963:-|nuORF;REV__nc|ENSG00000204463|P46379-2|BAG6;REV__nc|ENSG00000204463|P46379-4|BAG6;REV__nc|ENSG00000204463|P46379-5|BAG6;REV__nc|ENSG00000204463|P46379|BAG6	44.377184641726394	0.6291511924298419	1				NaN	NaN	0	NaN	3201	3538	6740
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6742	23.343	NaN	1274	30	0	197.54	0.106	+			30328	PTRYLHPEGLP	11	35	640.3414701284847	1278.6683873237694	2	640.3412475585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PTRYLHPEGLP_	COL14A1|p.G1524Efs*48|1|0.15|ENSG00000187955|chr8:120315546-120315546|A/-|frameshift_variant;COL14A1|p.N1312Kfs*3|1|0.45|ENSG00000187955|chr8:120283741-120283742|-/A|frameshift_variant;ENSG00000187955|ENST00000297848|COL14A1;nc|ENSG00000187955|Q05707-2|COL14A1;nc|ENSG00000187955|Q05707-3|COL14A1	16.52985593315525	0.793090074565524	1				NaN	NaN	0	NaN	3202	3538	6740
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6743	23.345	NaN	1265.3	30	0	181.1	0.106			+	2058	ALAKNGVVVKQ	11	50	563.8500206788611	1125.6854884245222	2	563.8509521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ALAKNGVVVKQ_	REV__ENSG00000101407|ENST00000373447|TTI1;REV__TTI1|p.L924Wfs*37|2|0.15|ENSG00000101407|chr20:37999211-37999211|G/-|frameshift_variant	37.81151784470057	0.5878881669006212	1				NaN	NaN	0	NaN	3203	3538	6740
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6744	23.347	NaN	1701.6	30	0	413.24	0.106	+			31672	QNHSGRFV	8	55	472.737741037697	943.460929142194	2	472.7375183105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QNHSGRFV_	ENSG00000173372|ENST00000374642|C1QA	40.5726180659479	0.6527593143185008	1				NaN	NaN	0	NaN	3204	3538	6740
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6745	23.349	NaN	2099.4	30	0	833.6	0.106	+			31559	QLNLTVMKK	9	53	537.8187920700901	NaN	0	537.8191528320312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QLNLTVMKK_	TOP2B|p.S1441Vfs*41|4|0.13|ENSG00000077097|chr3:25606100-25606100|T/-|frameshift_variant	44.377184641726394	0.24544280798894275	1				NaN	NaN	0	NaN	3205	3538	6740
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6746	23.351	NaN	1568.2	30	0	264.48	0.106			+	17814	IEVTKFDKK	9	55	554.3237030871172	1106.6328532410344	2	554.3245239257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IEVTKFDKK_	REV__ENST00000530028.2_2_15:49171086-49171392:+|nuORF	47.95952297671804	0.32689736945648856	1				NaN	NaN	0	NaN	3206	3538	6740
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6747	23.352	NaN	1079	30	0	238.66	0.038	+			51560	YYFELLHKQ	9	43	620.8201460442709	1239.6257391553418	2	620.8211059570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YYFELLHKQ_	B4GALNT4|p.G768Afs*19|1|0.14|ENSG00000182272|chr11:379512-379512|G/-|frameshift_variant;ENSG00000182272|ENST00000329962|B4GALNT4	18.324413293986947	0.6112419832031293	1				NaN	NaN	0	NaN	3207	3538	6740
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6758	23.376	NaN	6156.1	30	0	1335.8	0.214	+			36406	SETNDTKVL	9	63	503.7560065177628	1005.4974601023256	2	503.755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SETNDTKVL_	ENSG00000111057|ENST00000388835|KRT18;ENST00000453838.2_1_1:182928211-182928406:-|nuORF	129.42129120953632	0.01549634589885217	1				NaN	NaN	0	NaN	3215	3541	6757
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6759	23.38	NaN	6713.1	30	0	887.66	0.106	+			44638	TTFTKIVNK	9	73	526.3109460057047	1050.6073390782094	2	526.3113403320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTFTKIVNK_	ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1670Tfs*23|1|0.29|ENSG00000174231|chr17:1659487-1659487|C/-|frameshift_variant	171.53180478179638	0.0025054460641941692	1				NaN	NaN	0	NaN	3216	3541	6757
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6760	23.382	NaN	3725.3	30	0	317.68	0.106	+			1441	AEYSTKNNAL	10	67	555.7744206974071	1109.534288461614	2	555.7747802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEYSTKNNAL_	ENSG00000129128|ENST00000503362|SPCS3;ENST00000507678.5_1_4:177243228-177249478:+|nuORF;ENST00000513139.1_1_4:177241188-177248429:+|nuORF	58.2462437865262	0.38179041844353556	1				NaN	NaN	0	NaN	3217	3541	6757
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6761	23.384	NaN	508.99	30	0	43.078	0.106				-1	 	0	32	425.31054115226254	NaN	0	425.31048583984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	3218	3541	6757
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6762	23.385	NaN	2629.1	30	0	491.05	0.106	+			43335	TGATLYLLR	9	37	336.53415449253646	1006.5806340778095	3	336.53424072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TGATLYLLR_	ENSG00000189043|ENST00000339600|NDUFA4;ENST00000486007.1_1_7:10977674-10979684:-|nuORF;NDUFA4|p.A37T|1|0.4|ENSG00000189043|chr7:10938830-10938830|C/T|missense_variant	19.359975847455235	0.6112419832031293	1				NaN	NaN	0	NaN	3219	3541	6757
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6763	23.387	NaN	968.65	30	0	210.58	0.106	+			17947	IGPKGNSL	8	33	393.2294569256639	784.4443609181278	2	393.2293395996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IGPKGNSL_	ENSG00000115677|ENST00000310931|HDLBP;ENST00000470710.1_1_2:242194755-242195742:-|nuORF;HDLBP|p.S551Kfs*2|1|0.11|ENSG00000115677|chr2:241248082-241248083|-/T|frameshift_variant	55.50420428727701	0.5462892107279674	1				NaN	NaN	0	NaN	3220	3541	6757
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6764	23.389	NaN	1518.9	30	0	249.87	0.034			+	3543	ASSVPISLSG	10	44	459.25085013716085	916.4871473411217	2	459.2503967285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASSVPISLSG_	REV__TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant	34.172542307311794	0.6007644933930345	1				NaN	NaN	0	NaN	3221	3541	6757
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6773	23.411	NaN	9991.8	30	0	788.83	0.211			+	-1	LMELCDWWWEV	11	81	791.8397771152073	1581.6650012972145	2	791.8396606445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_LM(Oxidation (M))ELC(Carbamidomethyl (C))DWWWEV_	REV__ARID1A|p.F2141Sfs*59|5|0.26|ENSG00000117713|chr1:26780313-26780313|C/-|frameshift_variant;REV__ARID1A|p.P2114Rfs*21|1|0.46|ENSG00000117713|chr1:26780236-26780236|C/-|frameshift_variant;REV__ARID1A|p.V2244Gfs*34|1|0.31|ENSG00000117713|chr1:26780626-26780627|-/G|frameshift_variant;REV__ENSG00000117713|ENST00000324856|ARID1A;REV__nc|ENSG00000117713|O14497-2|ARID1A;REV__nc|ENSG00000117713|O14497-3|ARID1A	19.1035232394073	0.7810393085260824	1				NaN	NaN	0	NaN	3227	3544	6772
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6774	23.414	NaN	2269.1	30	0	314.55	0.106	+			47301	VNPNSQTTL	9	45	487.25071504627454	972.4868771593491	2	487.2506408691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VNPNSQTTL_	ARFGEF1|p.F1680Lfs*8|1|0.29|ENSG00000066777|chr8:67203171-67203171|A/-|frameshift_variant;ARFGEF1|p.K888Rfs*10|1|0.36|ENSG00000066777|chr8:67253485-67253486|TT/-|frameshift_variant;ENSG00000066777|ENST00000262215|ARFGEF1	30.317721548370564	0.5199124245378496	1				NaN	NaN	0	NaN	3228	3544	6772
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6775	23.416	NaN	1378.6	30	0	389.49	0.106			+	5431	ATYNGTVD	8	36	420.69037321976936	839.3661935063387	2	420.69024658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATYNGTVD_	REV__ENSG00000174327|ENST00000308027|SLC16A13	17.364965105453717	0.7956685240855921	1				NaN	NaN	0	NaN	3229	3544	6772
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6776	23.418	NaN	1083.8	30	0	86.199	0.106	+			47646	VSCPVGIKK	9	55	465.7752979029973	NaN	0	465.7756042480469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSCPVGIKK_	ENSG00000175806|ENST00000317173|MSRA;nc|ENSG00000175806|Q9UJ68-2|MSRA;nc|ENSG00000175806|Q9UJ68-3|MSRA;nc|ENSG00000175806|Q9UJ68-4|MSRA;nc|ENSG00000175806|Q9UJ68-5|MSRA	34.172542307311794	0.30503706118289736	1				NaN	NaN	0	NaN	3230	3544	6772
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6777	23.42	NaN	1142.8	30	0	133.91	0.106			+	20682	KGPAERSKQ	9	56	500.7804870605469	NaN	0	500.7804870605469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KGPAERSKQ_	REV__ENSG00000139144|ENST00000538779|PIK3C2G;REV__nc|ENSG00000139144|O75747-2|PIK3C2G;REV__PIK3C2G|p.I437Yfs*5|1|0.42|ENSG00000139144|chr12:18338456-18338456|A/-|frameshift_variant;REV__PIK3C2G|p.N798Mfs*16|2|0.21|ENSG00000139144|chr12:18488455-18488455|A/-|frameshift_variant	31.529811441608018	0.3183796599642538	1				NaN	NaN	0	NaN	3231	3544	6772
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6778	23.422	NaN	1535.8	30	0	239.32	0.035	+			10246	ETKKTAIVV	9	50	494.8045604406022	987.5945679480044	2	495.2909851074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ETKKTAIVV_	ASPM|p.I3229Nfs*2|1|0.48|ENSG00000066279|chr1:197090339-197090340|-/T|frameshift_variant;ENSG00000066279|ENST00000367409|ASPM	37.81151784470057	0.4459294069877048	1				NaN	NaN	0	NaN	3232	3544	6772
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6789	23.447	NaN	19146	30	0	1199.5	0.215	+			31320	QINLLHKGS	9	98	505.2929780055617	1008.5714030779234	2	505.2930603027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QINLLHKGS_	ENSG00000130052|ENST00000374599|STARD8;nc|ENSG00000130052|Q92502|STARD8;STARD8|p.A874Sfs*16|1|0.42|ENSG00000130052|chrX:68723677-68723678|-/C|frameshift_variant;STARD8|p.L976Afs*8|1|0.27|ENSG00000130052|chrX:68724090-68724091|-/G|frameshift_variant	68.78682469695295	0.14603441672067394	1				NaN	NaN	0	NaN	3240	3547	6788
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6790	23.45	NaN	4438.3	30	0	496.93	0.106	+			743	AEDFEWTR	8	64	527.2353501199237	1052.4561473066474	2	527.23583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEDFEWTR_	DNAH14|p.I2559Nfs*2|1|0.39|ENSG00000185842|chr1:225337448-225337449|-/A|frameshift_variant;DNAH14|p.T2021Hfs*9|1|0.38|ENSG00000185842|chr1:225289906-225289906|A/-|frameshift_variant;ENSG00000185842|ENST00000682510|DNAH14;nc|ENSG00000185842|Q0VDD8-4|DNAH14;nc|ENSG00000185842|Q0VDD8|DNAH14	42.47446043378293	0.6409579893742323	1				NaN	NaN	0	NaN	3241	3547	6788
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6791	23.452	NaN	4499.3	30	0	539.15	0.106	+			43124	TERPQPQTL	9	58	535.2855531333753	1068.5565533335505	2	535.2863159179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TERPQPQTL_	ENSG00000104671|ENST00000221114|DCTN6	48.601550744091256	0.3193666407755445	1				NaN	NaN	0	NaN	3242	3547	6788
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6792	23.454	NaN	3875.3	30	0	1430.8	0.106	+			40106	STPDAVMGNPK	11	57	558.7707203411245	1115.526887749049	2	558.7716064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STPDAVMGNPK_	ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF	53.08895987439943	0.38514566451266113	1				NaN	NaN	0	NaN	3243	3547	6788
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6793	23.456	NaN	2187.4	30	0	243.17	0.106	+			15813	GVYGDVQRVK	10	62	560.8085333682527	1119.6025138033053	2	561.3109741210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GVYGDVQRVK_	ENSG00000011304|ENST00000356948|PTBP1;ENSG00000117569|ENST00000674951|PTBP2;ENST00000586944.5_1_19:807712-810823:+|nuORF;nc|ENSG00000011304|P26599-1|PTBP1;nc|ENSG00000011304|P26599-2|PTBP1;nc|ENSG00000117569|Q9UKA9-2|PTBP2;nc|ENSG00000117569|Q9UKA9-3|PTBP2;nc|ENSG00000117569|Q9UKA9-4|PTBP2;PTBP2|p.N446Ifs*21|1|0.27|ENSG00000117569|chr1:96812873-96812873|A/-|frameshift_variant;PTBP2|p.P452Sfs*10|1|0.17|ENSG00000117569|chr1:96812888-96812889|-/T|frameshift_variant	47.95952297671804	0.47580206326914537	1				NaN	NaN	0	NaN	3244	3547	6788
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6794	23.458	NaN	2463.6	30	0	244.81	0.106	+			41180	SVLAETIKK	9	63	494.8045604406022	987.5945679480044	2	494.8052673339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVLAETIKK_	ENSG00000074054|ENST00000696935|CLASP1;nc|ENSG00000074054|Q7Z460-2|CLASP1;nc|ENSG00000074054|Q7Z460-3|CLASP1;nc|ENSG00000074054|Q7Z460-4|CLASP1;nc|ENSG00000074054|Q7Z460-5|CLASP1;nc|ENSG00000074054|Q7Z460|CLASP1	49.44154591367651	0.3095138337212152	1				NaN	NaN	0	NaN	3245	3547	6788
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6795	23.459	NaN	1612.3	30	0	136.93	0.037	+			13071	GFIHLVIEGW	10	50	585.8206439002827	NaN	0	585.8201904296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GFIHLVIEGW_	EBP|p.V208*|1|0.28|ENSG00000147155|chrX:48528386-48528386|G/-|frameshift_variant;ENSG00000147155|ENST00000495186|EBP	38.80614096846853	0.372755673314885	1				NaN	NaN	0	NaN	3246	3547	6788
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6805	23.481	NaN	4040.5	30	0	978.12	0.214	+			47059	VLGPTPVQK	9	52	469.78699732457096	937.559441715942	2	469.78680419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VLGPTPVQK_	ENSG00000166225|ENST00000549921|FRS2	52.936696900407355	0.27249468807391813	1				NaN	NaN	0	NaN	3253	3550	6804
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6806	23.485	NaN	1490.9	30	0	212.7	0.106	+			17400	IAQAGLELG	9	49	436.24749282497316	870.4804327167463	2	436.24713134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IAQAGLELG_	ENST00000556539.5_1_12:56736081-56736417:-|nuORF	44.116797842482775	0.37197099687881774	1				NaN	NaN	0	NaN	3254	3550	6804
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6807	23.487	NaN	1346.6	30	0	134.24	0.106	+			18241	INYVLLRHC	9	40	565.812221669144	NaN	0	565.8119506835938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_INYVLLRHC_	tr|U7T4Y7|U7T4Y7_FUSNUPeptide/nickeltransportsystempermeaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00608PE=3SV=1	24.519189625965996	0.35377483217337163	1				NaN	NaN	0	NaN	3255	3550	6804
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6808	23.489	NaN	921.41	30	0	81.974	0.037			+	46455	VESPPAEVKSH	11	41	590.3034057617188	NaN	0	590.3034057617188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VESPPAEVKSH_	REV__ENSG00000047849|ENST00000683076|MAP4;REV__MAP4|p.R919Gfs*14|1|0.44|ENSG00000047849|chr3:47870917-47870917|G/-|frameshift_variant;REV__MAP4|p.T960Qfs*35|1|0.3|ENSG00000047849|chr3:47869309-47869309|T/-|frameshift_variant;REV__MAP4|p.V999*|1|0.25|ENSG00000047849|chr3:47867318-47867318|T/-|frameshift_variant;REV__nc|ENSG00000047849|P27816-4|MAP4	18.262085536374414	0.456735970842152	1				NaN	NaN	0	NaN	3256	3550	6804
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6815	23.507	NaN	2984.4	30	0	627.05	0.212				-1	 	0	50	638.3142381823732	1274.6139234315463	2	638.3143920898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	3260	3553	6814
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6816	23.51	NaN	1824.3	30	0	241.97	0.106			+	31301	QIIDNLDLE	9	59	536.7799051825103	1071.5452574318206	2	536.7802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QIIDNLDLE_	REV__ENSG00000132792|ENST00000361383|CTNNBL1;REV__ENST00000373473.5_1_20:36374873-36393614:+|nuORF;REV__nc|ENSG00000132792|Q8WYA6-4|CTNNBL1	51.33545320467046	0.2872990594074956	1				NaN	NaN	0	NaN	3261	3553	6814
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6817	23.512	NaN	1748.9	30	0	244.41	0.106	+			7689	DLILCFSPAI	10	64	546.2924979293663	1090.5704429255325	2	546.2928466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DLILCFSPAI_	ADAT1|p.F133Lfs*39|1|0.35|ENSG00000065457|chr16:75617167-75617167|A/-|frameshift_variant	42.396135135203025	0.5270658956260207	1				NaN	NaN	0	NaN	3262	3553	6814
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6818	23.514	NaN	1018.6	30	0	327.33	0.106				-1	DLRNPCLI	8	34	500.76630978156555	NaN	0	500.7666320800781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_DLRNPC(Carbamidomethyl (C))LI_	tr|U7STF3|U7STF3_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01388PE=4SV=1	20.481830146152948	1.741893751539848	1				NaN	NaN	0	NaN	3263	3553	6814
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6819	23.516	NaN	967.89	30	0	103.1	0.035	+			43718	TKSIVEKIQ	9	44	523.3162841796875	NaN	0	523.3162841796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TKSIVEKIQ_	ENSG00000133318|ENST00000377819|RTN3;nc|ENSG00000133318|O95197-2|RTN3;nc|ENSG00000133318|O95197-3|RTN3;nc|ENSG00000133318|O95197-4|RTN3;nc|ENSG00000133318|O95197-7|RTN3	30.317721548370564	0.32449924987115025	1				NaN	NaN	0	NaN	3264	3553	6814
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6824	23.53	NaN	2155.4	30	0	641	0.214				-1	 	0	45	384.7720625920663	767.5295722509326	2	384.7721252441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	3266	3556	6823
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6825	23.534	NaN	1872.4	30	0	285.38	0.035	+			41168	SVKNTKRR	8	54	494.8045604406022	987.5945679480044	2	495.3046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVKNTKRR_	ENSG00000221978|ENST00000400809|CCNL2;ENST00000463260.5_1_1:1322613-1323455:-|nuORF;ENST00000481223.6_1_1:1322613-1326370:-|nuORF;ENST00000482621.5_1_1:1322613-1328165:-|nuORF;nc|ENSG00000221978|Q96S94-3|CCNL2	30.503639358989545	0.7238069182250283	1				NaN	NaN	0	NaN	3267	3556	6823
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6832	23.55	NaN	3150	30	0	448.84	0.211	+			33492	RKETRFEEGEQ	11	67	704.8443023502556	1407.674051767311	2	704.844482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RKETRFEEGEQ_	ENSG00000183873|ENST00000423572|SCN5A;nc|ENSG00000183873|Q14524-3|SCN5A;nc|ENSG00000183873|Q14524-4|SCN5A;nc|ENSG00000183873|Q14524-5|SCN5A;nc|ENSG00000183873|Q14524-6|SCN5A;nc|ENSG00000183873|Q14524|SCN5A	29.170058357718403	0.683821074385409	1				NaN	NaN	0	NaN	3271	3559	6831
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6833	23.554	NaN	3833.5	30	0	1489	0.106	+			4396	ATHSQLLVK	9	44	332.8659799546103	995.5761104640309	3	332.8656921386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATHSQLLVK_	ENST00000415922.6_1_6:26636045-26636150:-|nuORF	21.9598887501803	0.5980208138527809	1				NaN	NaN	0	NaN	3272	3559	6831
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6834	23.556	NaN	1558.7	30	0	249.58	0.037	+			48772	VTYHMFRTK	9	58	591.8095243770878	1181.6044958209754	2	591.8091430664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTYHMFRTK_	ENST00000453465.1_1_10:21915067-21915193:-|nuORF;ENST00000478691.5_1_1:23664326-23665089:-|nuORF	70.39856735676683	0.13906523160059378	1				NaN	NaN	0	NaN	3273	3559	6831
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6840	23.572	NaN	13497	30	0	3888.7	0.214			+	45225	TVPGPSLGYR	10	81	349.5257377904045	1045.5553839714134	3	349.5257873535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVPGPSLGYR_	REV__ENSG00000174106|ENST00000308330|LEMD3	40.77816245573522	0.5419747034533848	1				NaN	NaN	0	NaN	3276	3562	6839
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6841	23.576	NaN	2857.5	30	0	526.18	0.106	+			40690	SVATSLKAPG	10	58	465.76623421500176	929.5179154968035	2	465.7666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVATSLKAPG_	ENSG00000176029|ENST00000326053|C11orf16;nc|nan|Q9NQ32-2|C11orf16	62.107414245175825	0.3466735403679669	1				NaN	NaN	0	NaN	3277	3562	6839
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6842	23.578	NaN	2040.1	30	0	226.42	0.036			+	-1	GTMPLFAPY	9	53	527.7514455426453	NaN	0	527.75146484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))GTM(Oxidation (M))PLFAPY_	REV__ENST00000407811.5_1_2:33745714-33747041:+|nuORF	52.29916861842294	0.1908481487866478	1				NaN	NaN	0	NaN	3278	3562	6839
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6851	23.599	NaN	3555.4	30	0	273.44	0.214			+	32132	QSLLDTLSAIG	11	62	559.3090862442682	1116.6036195553363	2	559.3094482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QSLLDTLSAIG_	REV__NIPBL|p.N24S|1|0.48|ENSG00000164190|chr5:36955478-36955478|A/G|missense_variant	78.26377905018397	0.16684720679201295	1				NaN	NaN	0	NaN	3284	3565	6850
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6852	23.603	NaN	1854.9	30	0	170.53	0.106				-1	GSLGSGIHCRK	11	56	586.302877998973	1170.591203064746	2	586.3038940429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GSLGSGIHC(Carbamidomethyl (C))RK_	ENST00000072644.6_2_1:54317878-54325759:-|nuORF	30.317721548370564	0.6717830234747728	1				NaN	NaN	0	NaN	3285	3565	6850
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6853	23.605	NaN	3366	30	0	543.33	0.106			+	25786	LSAPPGLLRA	10	49	332.2063670097709	NaN	0	332.2064514160156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSAPPGLLRA_	REV__ENSG00000149809|ENST00000279263|TM7SF2;REV__ENST00000528026.5_1_11:64879487-64882206:+|nuORF;REV__ENST00000530650.5_1_11:64879967-64883522:+|nuORF;REV__ENST00000533646.1_1_11:64879487-64880551:+|nuORF;REV__nc|ENSG00000149809|O76062-2|TM7SF2;REV__TM7SF2|p.N165Tfs*45|1|0.43|ENSG00000149809|chr11:65113402-65113402|G/-|frameshift_variant	47.95952297671804	0.31850267256932663	1				NaN	NaN	0	NaN	3286	3565	6850
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6854	23.606	NaN	1649.5	30	0	299.68	0.106				-1	CLALLCLGGA	10	51	495.758430802774	NaN	0	495.75848388671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_CLALLC(Carbamidomethyl (C))LGGA_	ENSG00000026297|ENST00000508775|RNASET2;ENST00000366855.10_1_6:167369102-167369700:-|nuORF;nc|ENSG00000026297|O00584-2|RNASET2;RNASET2|p.K36Nfs*2|1|0.35|ENSG00000026297|chr6:166952527-166952527|T/-|frameshift_variant	35.200714571348534	0.3845941098745963	1				NaN	NaN	0	NaN	3287	3565	6850
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6855	23.608	NaN	1720.6	30	0	152.4	0.106	+			27000	LYPVLMRAL	9	57	538.3214885964417	1074.6284242596832	2	538.3226928710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LYPVLMRAL_	ENSG00000103932|ENST00000304330|RPAP1;nc|ENSG00000103932|Q9BWH6-2|RPAP1;nc|ENSG00000103932|Q9BWH6-3|RPAP1;RPAP1|p.S869Qfs*34|1|0.48|ENSG00000103932|chr15:41522902-41522903|-/G|frameshift_variant	21.70233525837049	0.6004277881119521	1				NaN	NaN	0	NaN	3288	3565	6850
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6856	23.61	NaN	1086.8	30	0	326.31	0.035	+			6553	AYKEEANTI	9	46	519.7586071477866	1037.5026613623731	2	519.7583618164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AYKEEANTI_	ENSG00000175215|ENST00000398073|CTDSP2	42.86426827375447	0.38666266728046506	1				NaN	NaN	0	NaN	3289	3565	6850
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6863	23.627	NaN	1739.1	30	0	430.56	0.214			+	26574	LTTGSSHQL	9	44	472.2457521172047	942.4769513012094	2	472.24560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LTTGSSHQL_	REV__CDH12|p.T191Dfs*22|1|0.31|ENSG00000154162|chr5:21854747-21854748|-/G|frameshift_variant	53.351449002276354	0.2690372970092375	1				NaN	NaN	0	NaN	3293	3568	6862
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6864	23.63	NaN	2771.6	30	0	534.02	0.106			+	29443	PCKFHSRL	8	55	494.2641594461933	986.5137659591866	2	494.2641906738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PCKFHSRL_	REV__SENP7|p.K545Nfs*11|1|0.49|ENSG00000138468|chr3:101351640-101351640|T/-|frameshift_variant	45.9519527083369	0.6193794311207887	1				NaN	NaN	0	NaN	3294	3568	6862
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6865	23.632	NaN	3316.4	30	0	542.11	0.106	+			48265	VTDHNLHEL	9	65	539.2697935252694	1076.5250341173387	2	539.2705688476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTDHNLHEL_	ENSG00000177971|ENST00000403490|IMP3	67.49366992349736	0.1516260258713357	1				NaN	NaN	0	NaN	3295	3568	6862
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6866	23.634	NaN	2389.8	30	0	829.25	0.106	+			32352	QTYSTEPNNLK	11	57	647.8174336651625	1293.620314397125	2	647.817138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QTYSTEPNNLK_	ENSG00000108107|ENST00000344063|RPL28;nc|ENSG00000108107|P46779-2|RPL28;nc|ENSG00000108107|P46779-3|RPL28;nc|ENSG00000108107|P46779-4|RPL28;nc|ENSG00000108107|P46779-5|RPL28	45.02220120713402	0.4892240028381124	1				NaN	NaN	0	NaN	3296	3568	6862
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6867	23.636	NaN	1954.8	30	0	346.97	0.106			+	31411	QKLKYLKQ	8	58	524.8296272951676	NaN	0	524.8294677734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QKLKYLKQ_	REV__ENSG00000105298|ENST00000429344|CACTIN;REV__nc|ENSG00000105298|Q8WUQ7-2|CACTIN	71.37791200682192	1.7418937515398478	1				NaN	NaN	0	NaN	3297	3568	6862
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6868	23.637	NaN	2319.6	30	0	351.58	0.106	+			21397	KMMLQHPGQ	9	52	543.2676077420867	NaN	0	543.267333984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_KMM(Oxidation (M))LQHPGQ_	ENST00000465155.5_1_1:212782186-212791588:+|nuORF	44.116797842482775	0.2472372736944149	1				NaN	NaN	0	NaN	3298	3568	6862
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6869	23.639	NaN	2691.5	30	0	323.12	0.036	+			28152	NALNHTEQY	9	62	545.2515584269555	1088.488563920711	2	545.2523803710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NALNHTEQY_	ENSG00000146281|ENST00000275072|PM20D2	82.7504851949679	0.08565546331141553	1				NaN	NaN	0	NaN	3299	3568	6862
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6877	23.659	NaN	3237.8	30	0	1083.6	0.214				-1	 	0	45	362.7590037047738	723.5034544763477	2	362.7589416503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	3304	3571	6876
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6878	23.663	NaN	2482.9	30	0	372.24	0.106	+			15397	GTYGLDSVKK	10	57	534.2902265005027	1066.5659000678054	2	534.29052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTYGLDSVKK_	ENSG00000087338|ENST00000282570|GMCL1	50.033510581677724	0.4566913063131936	1				NaN	NaN	0	NaN	3305	3571	6876
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6879	23.665	NaN	1715.7	30	0	545.25	0.106	+			42140	SYNSVLAI	8	42	433.7344434535127	865.4543339738254	2	433.734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SYNSVLAI_	ENSG00000165046|ENST00000379957|LETM2;ENST00000297720.9_1_8:38245501-38250143:+|nuORF;LETM2|p.L155Wfs*8|1|0.18|ENSG00000165046|chr8:38392957-38392958|-/GGATG|frameshift_variant	25.450171626174864	0.7628259754767981	1				NaN	NaN	0	NaN	3306	3571	6876
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6880	23.666	NaN	1433.9	30	0	152.75	0.106			+	26412	LTESAISQSP	10	57	516.7634649963289	NaN	0	516.7631225585938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LTESAISQSP_	REV__ENSG00000196233|ENST00000421806|LCOR	47.657333605630114	0.3204131577145918	1				NaN	NaN	0	NaN	3307	3571	6876
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6881	23.668	NaN	4074.6	30	0	737.08	0.106			+	51566	YYIGTSIDAPL	11	47	404.87692389611414	1211.6089422885425	3	405.2113342285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YYIGTSIDAPL_	REV__ENSG00000135002|ENST00000376736|RFK;REV__ENST00000483155.5_1_9:79002317-79008728:-|nuORF	26.063383197487333	0.7164075632144343	1				NaN	NaN	0	NaN	3308	3571	6876
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6882	23.67	NaN	1524.8	30	0	109.9	0.106			+	31985	QREIRWTGEEY	11	57	733.8557739257812	NaN	0	733.8557739257812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QREIRWTGEEY_	REV__ENSG00000188730|ENST00000340652|VWC2	21.68575002086885	0.456735970842152	1				NaN	NaN	0	NaN	3309	3571	6876
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6883	23.672	NaN	2304.8	30	0	337.4	0.037	+			13852	GQWKEEQKL	9	67	573.3008676584053	1144.5871823836105	2	573.30078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GQWKEEQKL_	ENSG00000157020|ENST00000350697|SEC13;ENST00000477547.6_1_3:10345637-10359739:-|nuORF;ENST00000479868.6_1_3:10342947-10354476:-|nuORF;nc|ENSG00000157020|P55735-2|SEC13;nc|ENSG00000157020|P55735-3|SEC13;nc|ENSG00000157020|P55735-4|SEC13	101.25262130126117	0.03792372629710479	1				NaN	NaN	0	NaN	3310	3571	6876
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6893	23.695	NaN	4704.3	30	0	1111.8	0.214	+			14866	GTLNQPLTK	9	55	486.2795442637221	970.5445355942442	2	486.2796936035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTLNQPLTK_	ENSG00000103671|ENST00000261884|TRIP4	101.45984612302182	0.0377122763612125	1				NaN	NaN	0	NaN	3317	3574	6892
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6894	23.699	NaN	2430.4	30	0	231.75	0.106	+			21258	KLLLNHTN	8	58	476.7821044486929	951.5496559641858	2	476.781982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KLLLNHTN_	ENSG00000165555|ENST00000380835|NOXRED1;nc|ENSG00000165555|Q6NXP6-2|NOXRED1	63.30626980617807	0.4690498839812213	1				NaN	NaN	0	NaN	3318	3574	6892
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6895	23.701	NaN	1851	30	0	346.82	0.106	+			40328	STTAILQQK	9	46	495.28500034143906	988.5554477496781	2	495.28472900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STTAILQQK_	ENSG00000196449|ENST00000373044|YRDC	90.36981228632155	0.0638227155548745	1				NaN	NaN	0	NaN	3319	3574	6892
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6896	23.703	NaN	2408.5	30	0	345.31	0.106	+			30481	QAESHLYMK	9	51	561.7669432294488	1121.5193335256974	2	561.7675170898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_QAESHLYM(Oxidation (M))K_	CALCRL|p.N329H|1|0.41|ENSG00000064989|chr2:187352257-187352257|T/G|missense_variant	42.86426827375447	0.38666266728046506	1				NaN	NaN	0	NaN	3320	3574	6892
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6897	23.704	NaN	1645.2	30	0	274.79	0.106	+			51397	YTNGPLPDK	9	57	502.75584153410585	1003.4971301350117	2	502.7550048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YTNGPLPDK_	ENSG00000142789|ENST00000290122|CELA3A;ENSG00000219073|ENST00000337107|CELA3B	83.6470233535746	0.08277643980271215	1				NaN	NaN	0	NaN	3321	3574	6892
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6898	23.706	NaN	2222.2	30	0	295.09	0.106	+			18691	ITDEFVKQK	9	60	554.3054276775358	1106.5963024218715	2	554.3060302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ITDEFVKQK_	ENSG00000067445|ENST00000173898|TRO;ENSG00000102316|ENST00000375068|MAGED2;ENST00000475183.1_1_X:54953428-54957230:+|nuORF;ENST00000492706.5_1_X:54953428-54957450:+|nuORF;nc|ENSG00000067445|Q12816-2|TRO;nc|ENSG00000067445|Q12816-3|TRO;nc|ENSG00000067445|Q12816-4|TRO;nc|ENSG00000067445|Q12816-5|TRO;nc|ENSG00000102316|Q9UNF1-2|MAGED2;TRO|p.S1034Rfs*10|1|0.07|ENSG00000067445|chrX:54929826-54929826|C/-|frameshift_variant	118.74307786436346	0.02196067127630568	1				NaN	NaN	0	NaN	3322	3574	6892
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6899	23.708	NaN	1970.6	30	0	407.23	0.036	+			28430	NEVERTQAL	9	50	530.2751084926714	NaN	0	530.2742309570312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NEVERTQAL_	ENSG00000164327|ENST00000357387|RICTOR;ENST00000510711.5_1_5:38971963-39074479:-|nuORF;ENST00000513566.1_1_5:38981926-39074494:-|nuORF;nc|ENSG00000164327|Q6R327-3|RICTOR;nc|ENSG00000164327|Q6R327-4|RICTOR;RICTOR|p.K678Nfs*14|1|0.2|ENSG00000164327|chr5:38959796-38959796|T/-|frameshift_variant;RICTOR|p.S1495Pfs*13|1|0.05|ENSG00000164327|chr5:38945642-38945643|-/ATTCTGGG|frameshift_variant	90.60085204095205	0.040385177724871185	1				NaN	NaN	0	NaN	3323	3574	6892
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6908	23.728	NaN	3064.4	30	0	679.44	0.143			+	47186	VLVLDHIQA	9	48	336.5341830255446	1006.580719676834	3	336.5343017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VLVLDHIQA_	REV__ENSG00000204388|ENST00000375650|HSPA1B;REV__ENSG00000204389|ENST00000375651|HSPA1A;REV__nc|ENSG00000204389|P0DMV8-2|HSPA1A	33.51558372728122	0.4900267029546261	1				NaN	NaN	0	NaN	3329	3577	6907
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6919	23.755	NaN	2899.9	30	0	384.02	0.214	+			43956	TPEEKIREY	9	63	582.7982918965201	1163.5820308598402	2	582.7985229492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TPEEKIREY_	ENSG00000138668|ENST00000313899|HNRNPD;ENST00000514325.1_1_4:83279715-83279970:-|nuORF;nc|ENSG00000138668|Q14103-2|HNRNPD;nc|ENSG00000138668|Q14103-3|HNRNPD;nc|ENSG00000138668|Q14103-4|HNRNPD	47.95952297671804	0.32689736945648856	1				NaN	NaN	0	NaN	3337	3580	6918
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6920	23.759	NaN	1891.7	30	0	213.99	0.106			+	29337	NYTLDAIETM	10	61	585.7707248612111	1169.526896789222	2	585.7716674804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NYTLDAIETM_	REV__ENSG00000072134|ENST00000314728|EPN2;REV__ENST00000495155.5_1_17:19186396-19216987:+|nuORF;REV__nc|ENSG00000072134|O95208-2|EPN2;REV__nc|ENSG00000072134|O95208-3|EPN2	45.97224482568171	0.49411383603842696	1				NaN	NaN	0	NaN	3338	3580	6918
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6921	23.761	NaN	1509.2	30	0	200.46	0.106	+			10282	ETLVFSHNAV	10	44	558.7863593555325	1115.5581657778648	2	558.7863159179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ETLVFSHNAV_	ENSG00000123700|ENST00000243457|KCNJ2	32.81241826257853	0.6118718159329168	1				NaN	NaN	0	NaN	3339	3580	6918
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6922	23.763	NaN	1405.9	30	0	181.67	0.106	+			24134	LEKTYSAKL	9	58	526.8029434499383	1051.5913339666765	2	526.80322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LEKTYSAKL_	ENSG00000160789|ENST00000368300|LMNA;ENST00000496738.5_1_1:156104631-156105741:+|nuORF;nc|ENSG00000160789|P02545-2|LMNA;nc|ENSG00000160789|P02545-3|LMNA;nc|ENSG00000160789|P02545-4|LMNA;nc|ENSG00000160789|P02545-5|LMNA;nc|ENSG00000160789|P02545-6|LMNA	60.1669710687717	0.2122228167747824	1				NaN	NaN	0	NaN	3340	3580	6918
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6923	23.764	NaN	827.23	30	0	172.97	0.106	+			40111	STPFGASYLLV	11	30	577.8059692382812	NaN	0	577.8059692382812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STPFGASYLLV_	SRPK3|p.N389Y|1|0.3|ENSG00000184343|chrX:153784311-153784311|A/T|missense_variant	19.1035232394073	0.456735970842152	1				NaN	NaN	0	NaN	3341	3580	6918
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6924	23.766	NaN	1063.4	30	0	117.26	0.035				-1	ICMGCWPF	8	50	507.2045481266358	1012.3945433200716	2	507.7066650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_ICMGC(Carbamidomethyl (C))WPF_	ENST00000421496.5_1_2:85785587-85785659:-|nuORF	33.49298260027079	0.7007254697536482	1				NaN	NaN	0	NaN	3342	3580	6918
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6933	23.786	NaN	3477.6	30	0	310.47	0.211			+	31243	QHFANRVRSFV	11	72	680.8643625743995	1359.7141722155989	2	680.8648071289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QHFANRVRSFV_	REV__ENSG00000187048|ENST00000310638|CYP4A11;REV__nc|ENSG00000187048|Q02928-2|CYP4A11	51.19269402634007	0.4047928213175833	1				NaN	NaN	0	NaN	3348	3583	6932
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6934	23.79	NaN	1712.1	30	0	167.77	0.034	+			3621	ASVVAIDNK	9	46	458.7584536226895	915.502354312179	2	458.758056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASVVAIDNK_	ENSG00000102804|ENST00000458659|TSC22D1;ENSG00000157514|ENST00000372383|TSC22D3;ENST00000487881.2_1_13:45010128-45010713:-|nuORF;nc|ENSG00000102804|Q15714-2|TSC22D1;nc|ENSG00000102804|Q15714-3|TSC22D1;nc|ENSG00000157514|Q99576|TSC22D3	90.60085204095205	0.06317133949006545	1				NaN	NaN	0	NaN	3349	3583	6932
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6943	23.811	NaN	1500.9	30	0	217.63	0.144	+			3898	ATAQNIMNPK	10	61	544.2813777746101	1086.54820261602	2	544.2828369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATAQNIMNPK_	ENSG00000175311|ENST00000311620|ANKS4B	61.691277971877994	0.35045824941635534	1				NaN	NaN	0	NaN	3355	3586	6942
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6951	23.832	NaN	2611.5	30	0	296.43	0.214	+			14707	GTIIVSGSTEK	11	55	546.3000477237139	1090.5855425142277	2	546.301025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTIIVSGSTEK_	ENSG00000114742|ENST00000302313|WDR48;nc|ENSG00000114742|Q8TAF3-3|WDR48;nc|ENSG00000114742|Q8TAF3-4|WDR48	77.53327743719008	0.17293716712445248	1				NaN	NaN	0	NaN	3360	3589	6950
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6952	23.835	NaN	1171.2	30	0	148.51	0.106	+			13362	GLAGGGVL	8	40	322.19306801276144	NaN	0	322.1930847167969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GLAGGGVL_	ENST00000405486.5_2_22:41641775-41642279:-|nuORF	33.49298260027079	1.7418937515398478	1				NaN	NaN	0	NaN	3361	3589	6950
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6953	23.837	NaN	1237.5	30	0	202.01	0.037	+			16502	HETTITQQSV	10	48	572.285888671875	NaN	0	572.285888671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HETTITQQSV_	ENSG00000178104|ENST00000695795|PDE4DIP;nc|ENSG00000178104|Q5VU43-13|PDE4DIP;nc|ENSG00000178104|Q5VU43-2|PDE4DIP;nc|ENSG00000178104|Q5VU43-3|PDE4DIP;nc|ENSG00000178104|Q5VU43-4|PDE4DIP;nc|ENSG00000178104|Q5VU43-6|PDE4DIP;nc|ENSG00000178104|Q5VU43-7|PDE4DIP;nc|ENSG00000178104|Q5VU43|PDE4DIP;PDE4DIP|p.E1085Ffs*6|1|0.06|ENSG00000178104|chr1:149001704-149001705|-/GTTCC|frameshift_variant;PDE4DIP|p.V841Lfs*4|1|0.41|ENSG00000178104|chr1:148978357-148978357|A/-|frameshift_variant	47.95952297671804	0.31850267256932663	1				NaN	NaN	0	NaN	3362	3589	6950
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6959	23.853	NaN	2746.1	30	0	729.81	0.212				-1	 	0	48	638.3142381823732	1274.6139234315463	2	638.3141479492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	3365	3592	6958
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6960	23.857	NaN	2854.3	30	0	485.7	0.106	+			12422	GEAQVGKTSL	10	66	495.26663543044424	988.5187179276885	2	495.2664489746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEAQVGKTSL_	ENSG00000140983|ENST00000315082|RHOT2;ENST00000562598.5_1_16:718199-720176:+|nuORF;ENST00000562708.5_1_16:718199-718465:+|nuORF;ENST00000567017.5_1_16:718199-721765:+|nuORF;ENST00000568950.5_1_16:718199-721765:+|nuORF;ENST00000569675.5_1_16:718199-718652:+|nuORF	70.39856735676683	0.27406383984062843	1				NaN	NaN	0	NaN	3366	3592	6958
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6961	23.859	NaN	1378.7	30	0	96.824	0.106			+	33678	RNRATLTAK	9	52	515.807921348588	NaN	0	515.8081665039062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RNRATLTAK_	REV__ENSG00000188343|ENST00000518322|CIBAR1;REV__nc|ENSG00000188343|A1XBS5-2|CIBAR1;REV__nc|ENSG00000188343|A1XBS5-3|CIBAR1;REV__nc|ENSG00000188343|A1XBS5-4|CIBAR1	32.75053402867276	0.3122164853807509	1				NaN	NaN	0	NaN	3367	3592	6958
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6962	23.861	NaN	1001.3	30	0	137.24	0.034	+			22921	KVPQVSTPT	9	51	478.773774932652	955.532996932104	2	478.773193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KVPQVSTPT_	ALB|p.V457Wfs*25|1|0.2|ENSG00000163631|chr4:73417606-73417606|A/-|frameshift_variant;CON__P02768-1;CON__P02769;ENSG00000163631|ENST00000295897|ALB;nc|ENSG00000163631|P02768-2|ALB;nc|ENSG00000163631|P02768-3|ALB	44.377184641726394	0.36891676396732553	1				NaN	NaN	0	NaN	3368	3592	6958
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6966	23.875	NaN	2989.1	30	0	687.07	0.214	+			13183	GIAGSLTNK	9	49	430.74522114891784	859.4758893646357	2	430.7452697753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GIAGSLTNK_	ENSG00000175445|ENST00000650287|LPL	96.19043198914106	0.047412499214244314	1				NaN	NaN	0	NaN	3369	3595	6965
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6967	23.878	NaN	3328.9	30	0	1879.6	0.106			+	9539	ELDRLVAN	8	45	465.2559138147715	NaN	0	465.2558288574219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ELDRLVAN_	REV__ENST00000560301.5_1_15:41067690-41071423:-|nuORF	27.882242232435846	1.7418937515398478	1				NaN	NaN	0	NaN	3370	3595	6965
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6968	23.88	NaN	1743.3	30	0	400.46	0.106				-1	 	0	35	384.7720625920663	767.5295722509326	2	384.7720642089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	3371	3595	6965
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6969	23.882	NaN	1249	30	0	426.75	0.106			+	50018	WCRPPLPV	8	38	512.77490234375	NaN	0	512.77490234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_WC(Carbamidomethyl (C))RPPLPV_	REV__ENST00000527620.5_1_11:559022-559837:+|nuORF	44.53106598305862	1.7418937515398478	1				NaN	NaN	0	NaN	3372	3595	6965
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6970	23.884	NaN	1810.1	30	0	214.53	0.106	+			10388	EVDPDTKEM	9	52	532.2339964422465	1062.453439951293	2	532.2345581054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EVDPDTKEM_	ENSG00000182774|ENST00000647841|RPS17;ENST00000396783.2_1_6:29457050-29457287:-|nuORF;ENST00000423610.1_1_22:32435574-32435880:+|nuORF;ENST00000461663.1_1_5:116052154-116052343:+|nuORF;ENST00000561068.5_3_15:83205554-83208094:-|nuORF	60.11826168202944	0.21262886028301267	1				NaN	NaN	0	NaN	3373	3595	6965
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6971	23.886	NaN	1239.2	30	0	160.94	0.039	+			18670	ISYFLDTVGVQ	11	42	414.5501760727283	NaN	0	414.2152404785156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ISYFLDTVGVQ_	THE1B-int_dup1996|chr7:8345870-8347393:+|1.2346957743909006|0.2358979979729452|2.39|457.0|65|2|anti-sense	34.08650109265054	0.41350691770670583	1				NaN	NaN	0	NaN	3374	3595	6965
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6976	23.9	NaN	2042.9	30	0	318.98	0.214	+			27697	MPVRAADKL	9	52	500.7834280848329	999.5523032364658	2	500.78338623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MPVRAADKL_	ENSG00000100603|ENST00000261531|SNW1;ENST00000557663.1_1_14:78205086-78227470:-|nuORF;SNW1|p.M312Nfs*10|1|0.11|ENSG00000100603|chr14:77731086-77731087|-/T|frameshift_variant;SNW1|p.T261Ffs*14|1|0.06|ENSG00000100603|chr14:77732595-77732596|-/TACTTTTAAA|frameshift_variant	65.15724298150197	0.17062369902793603	1				NaN	NaN	0	NaN	3376	3598	6975
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6977	23.904	NaN	1895.9	30	0	217.55	0.106	+			19967	KEGVFAKEV	9	64	503.78163045506966	1005.5487079769393	2	503.781494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEGVFAKEV_	ENSG00000169710|ENST00000306749|FASN	75.04331003522576	0.118981335847003	1				NaN	NaN	0	NaN	3377	3598	6975
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6978	23.906	NaN	2151.4	30	0	183.87	0.106	+			47539	VQTVSAGALG	10	56	451.75039069422417	901.4862284552484	2	451.7502746582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VQTVSAGALG_	ENSG00000070476|ENST00000389709|ZXDC;nc|ENSG00000070476|Q2QGD7-2|ZXDC;nc|ENSG00000070476|Q2QGD7-3|ZXDC	51.19269402634007	0.44601001148513897	1				NaN	NaN	0	NaN	3378	3598	6975
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6979	23.907	NaN	2243	30	0	995.22	0.106			+	25718	LRQTCAVPL	9	43	334.19130982742274	999.5521000824683	3	334.1914367675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LRQTCAVPL_	REV__ENSG00000054793|ENST00000338821|ATP9A	34.172542307311794	0.4838870758800184	1				NaN	NaN	0	NaN	3379	3598	6975
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6980	23.909	NaN	1331.6	30	0	131.6	0.034			+	612	ADSLAIKKV	9	50	472.7923683454829	943.5701837577658	2	472.7930603027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ADSLAIKKV_	REV__ENSG00000141639|ENST00000400384|MAPK4	42.396135135203025	0.392153681582562	1				NaN	NaN	0	NaN	3380	3598	6975
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6993	23.936	NaN	949.27	30	0	113.9	0.214			+	31156	QGINHKLLQ	9	43	525.805908203125	NaN	0	525.805908203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QGINHKLLQ_	REV__CUX2|p.A1430Cfs*11|1|0.26|ENSG00000111249|chr12:111348143-111348144|-/C|frameshift_variant;REV__CUX2|p.L655Sfs*49|1|0.38|ENSG00000111249|chr12:111312159-111312160|-/T|frameshift_variant;REV__CUX2|p.P1429Lfs*23|1|0.33|ENSG00000111249|chr12:111348144-111348144|C/-|frameshift_variant;REV__ENSG00000111249|ENST00000261726|CUX2	49.44154591367651	0.21054156626303966	1				NaN	NaN	0	NaN	3390	3601	6992
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	6994	23.94	NaN	1446.7	30	0	156.82	0.036	+			10478	EVQKLQTLV	9	54	529.3167591643365	1056.618965395473	2	529.3167114257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EVQKLQTLV_	ENSG00000126777|ENST00000395314|KTN1;KTN1|p.A1102Gfs*15|2|0.3|ENSG00000126777|chr14:55670756-55670757|-/A|frameshift_variant;KTN1|p.H994Sfs*2|1|0.35|ENSG00000126777|chr14:55659677-55659678|-/C|frameshift_variant;KTN1|p.K1078Nfs*12|1|0.3|ENSG00000126777|chr14:55667292-55667292|A/-|frameshift_variant;KTN1|p.K1101Rfs*18|1|0.4|ENSG00000126777|chr14:55670757-55670757|A/-|frameshift_variant;KTN1|p.P993Lfs*6|1|0.36|ENSG00000126777|chr14:55659678-55659678|C/-|frameshift_variant;nc|ENSG00000126777|Q86UP2-2|KTN1;nc|ENSG00000126777|Q86UP2-3|KTN1;nc|ENSG00000126777|Q86UP2-4|KTN1	32.81241826257853	0.4965981579233955	1				NaN	NaN	0	NaN	3391	3601	6992
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7001	23.958	NaN	3050.1	30	0	910.88	0.214				-1	 	0	48	363.1740604527028	724.3335679722056	2	363.174072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	3395	3604	7000
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7002	23.962	NaN	3461.3	30	0	504.8	0.106	+			10819	FANGRSTGL	9	52	461.74031097109025	921.4660690089805	2	461.7402648925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FANGRSTGL_	ENSG00000077080|ENST00000160382|ACTL6B;ENSG00000136518|ENST00000429709|ACTL6A;nc|ENSG00000136518|O96019-2|ACTL6A	58.22992032128504	0.22837015374068087	1				NaN	NaN	0	NaN	3396	3604	7000
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7003	23.964	NaN	1560.6	30	0	588.92	0.106				-1	 	0	31	341.16078401245403	680.3070150917081	2	341.1610107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	3397	3604	7000
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7004	23.965	NaN	2429.7	30	0	341.54	0.106			+	25474	LPRSLPACPRS	11	50	598.8319256778836	1195.6492984225672	2	598.83203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LPRSLPACPRS_	REV__ENST00000537112.5_1_16:16421763-16427707:+|nuORF	38.714083909724	0.5755383074156426	1				NaN	NaN	0	NaN	3398	3604	7000
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7005	23.967	NaN	5047.9	30	0	1455	0.106			+	8836	EELQQKLLK	9	63	376.8922339042332	1127.6548723128997	3	377.2264709472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EELQQKLLK_	REV__ENSG00000046651|ENST00000340096|OFD1;REV__ENST00000490265.5_1_X:13771424-13787224:+|nuORF;REV__nc|ENSG00000046651|O75665-3|OFD1	35.61828744233558	0.47037581924408073	1				NaN	NaN	0	NaN	3399	3604	7000
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7006	23.969	NaN	2438.6	30	0	370.58	0.106			+	40163	STQQSKKPL	9	59	529.7956916572747	1057.5768303813493	2	529.7957153320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))STQQSKKPL_	REV__ENST00000441864.6_1_19:50170019-50170310:+|nuORF	51.19269402634007	0.2889735674168909	1				NaN	NaN	0	NaN	3400	3604	7000
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7007	23.971	NaN	2922.8	30	0	707.49	0.035			+	32874	RDGLSALIR	9	60	500.7984704292957	999.5823879253915	2	500.79937744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RDGLSALIR_	REV__ENSG00000185046|ENST00000683438|ANKS1B;REV__ENST00000552245.5_1_12:99225710-99548222:-|nuORF;REV__nc|ENSG00000185046|Q7Z6G8-10|ANKS1B;REV__nc|ENSG00000185046|Q7Z6G8-2|ANKS1B;REV__nc|ENSG00000185046|Q7Z6G8-3|ANKS1B;REV__nc|ENSG00000185046|Q7Z6G8-4|ANKS1B;REV__nc|ENSG00000185046|Q7Z6G8-5|ANKS1B;REV__nc|ENSG00000185046|Q7Z6G8-6|ANKS1B;REV__nc|ENSG00000185046|Q7Z6G8-7|ANKS1B;REV__nc|ENSG00000185046|Q7Z6G8|ANKS1B	38.753607047826485	0.4348790777924195	1				NaN	NaN	0	NaN	3401	3604	7000
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7016	23.991	NaN	4636.9	30	0	516.9	0.214	+			41388	SVMLGGRNIK	10	66	537.8077990373826	1073.601045141565	2	537.8080444335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVMLGGRNIK_	ENSG00000179950|ENST00000526683|PUF60;nc|ENSG00000179950|Q9UHX1-2|PUF60;nc|ENSG00000179950|Q9UHX1-3|PUF60;nc|ENSG00000179950|Q9UHX1-4|PUF60;nc|ENSG00000179950|Q9UHX1-5|PUF60;nc|ENSG00000179950|Q9UHX1-6|PUF60	66.9202029811203	0.3029018092171124	1				NaN	NaN	0	NaN	3407	3607	7015
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7017	23.994	NaN	3258.5	30	0	983.74	0.106	+			18587	ISPTLGSH	8	40	406.21916982361745	810.4237867140349	2	406.21881103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ISPTLGSH_	HERVH-int_dup3522|chrX:4540915-4541307:-|3.3067715530513007|0.0009310524769523|11.79|451.0|10|3|sense	57.81127852772723	0.5234495074909924	1				NaN	NaN	0	NaN	3408	3607	7015
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7018	23.996	NaN	3156.4	30	0	327.22	0.106	+			24076	LEKENKELL	9	67	558.3191389416714	NaN	0	558.3189697265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LEKENKELL_	ENSG00000132688|ENST00000368223|NES;NES|p.A1050Pfs*14|1|0.36|ENSG00000132688|chr1:156671040-156671040|C/-|frameshift_variant;NES|p.P1439Qfs*11|1|0.19|ENSG00000132688|chr1:156669874-156669874|C/-|frameshift_variant;NES|p.V1249Cfs*11|1|0.37|ENSG00000132688|chr1:156670443-156670443|C/-|frameshift_variant	85.86182877749512	0.05129763505578642	1				NaN	NaN	0	NaN	3409	3607	7015
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7019	23.998	NaN	3996.2	30	0	2144.7	0.106			+	47964	VSNAAHHLLI	10	37	358.8740440239899	1073.6003026721696	3	358.8741760253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSNAAHHLLI_	REV__ENSG00000112294|ENST00000357578|ALDH5A1;REV__nc|ENSG00000112294|P51649-2|ALDH5A1	35.15202426646627	0.5927656479315102	1				NaN	NaN	0	NaN	3410	3607	7015
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7020	24	NaN	3102.4	30	0	1785	0.106				-1	LLPSPQPRAD	10	46	568.3085214977026	1134.602490062205	2	568.3088989257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LLPSPQPRAD_	ENST00000491511.6_1_3:101498287-101498587:+|nuORF	30.317721548370564	0.6322445173429027	1				NaN	NaN	0	NaN	3411	3607	7015
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7021	24.002	NaN	5423.6	30	0	971.15	0.106	+			5451	ATYSVGMQK	9	61	492.744314497349	983.4740760614981	2	492.7442626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATYSVGMQK_	ENSG00000131941|ENST00000254260|RHPN2;ENST00000592247.1_1_19:33470904-33481620:-|nuORF;nc|ENSG00000131941|Q8IUC4-2|RHPN2;nc|ENSG00000258628|A8MT19|RHPN2P1	141.52041321563706	0.009766778904176347	1				NaN	NaN	0	NaN	3412	3607	7015
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7022	24.004	NaN	3777.1	30	0	1108.4	0.036	+			14125	GSLRPFVQK	9	51	344.53800164987257	1030.5921755498177	3	344.5375061035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GSLRPFVQK_	ENSG00000112297|ENST00000633556|CRYBG1;nc|ENSG00000112297|Q9Y4K1-1|CRYBG1;nc|ENSG00000112297|Q9Y4K1-2|CRYBG1	58.78195531508484	0.22376836668196862	1				NaN	NaN	0	NaN	3413	3607	7015
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7033	24.029	NaN	24240	30	0	6743.9	0.213	+			10669	EYSKQMQRF	9	81	608.7925005724927	1215.5704482117853	2	608.7926635742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EYSKQMQRF_	ENSG00000116478|ENST00000373548|HDAC1;ENSG00000196591|ENST00000519065|HDAC2;ENST00000463172.5_1_1:32757770-32792715:+|nuORF;ENST00000481281.5_1_1:32757770-32793222:+|nuORF;nc|ENSG00000196591|Q92769-3|HDAC2	148.98678547993487	0.0071052929883181565	1				NaN	NaN	0	NaN	3421	3610	7032
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7034	24.033	NaN	7429.4	30	0	1319	0.106	+			48849	VVCEYIVKK	9	76	569.3195825172536	1136.624612101307	2	569.3203735351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_VVC(Carbamidomethyl (C))EYIVKK_	EIF2S3|p.I441Nfs*4|1|0.29|ENSG00000130741|chrX:24073223-24073224|-/A|frameshift_variant;ENSG00000130741|ENST00000253039|EIF2S3;ENSG00000180574|ENST00000538173|EIF2S3B;nc|ENSG00000180574|Q2VIR3-2|EIF2S3B	139.97047562133406	0.010493916756945389	1				NaN	NaN	0	NaN	3422	3610	7032
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7035	24.035	NaN	4715	30	0	1061.8	0.106	+			39856	STLNVGVNK	9	65	466.2639515726688	930.5133502121377	2	466.2636413574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STLNVGVNK_	AGBL5|p.R813Gfs*68|1|0.4|ENSG00000084693|chr2:27069649-27069649|C/-|frameshift_variant;ENSG00000084693|ENST00000360131|AGBL5;nc|ENSG00000084693|Q8NDL9-2|AGBL5;nc|ENSG00000084693|Q8NDL9-3|AGBL5	109.47833844074708	0.029530294723441826	1				NaN	NaN	0	NaN	3423	3610	7032
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7036	24.037	NaN	3519.1	30	0	370.42	0.106	+			23453	LAEAGGRAL	9	51	429.2457131527584	856.4768733723168	2	429.2453918457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LAEAGGRAL_	ENSG00000197912|ENST00000645818|SPG7;nc|ENSG00000197912|Q9UQ90-2|SPG7	93.19546047674547	0.05585629608842056	1				NaN	NaN	0	NaN	3424	3610	7032
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7037	24.039	NaN	3149.2	30	0	404.03	0.106	+			39350	STCIYGGAPK	10	61	527.2557951444359	1052.4970373556716	2	527.2554931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_STC(Carbamidomethyl (C))IYGGAPK_	DDX5|p.D424Ifs*31|1|0.03|ENSG00000108654|chr17:64500720-64500721|-/AAGCAATTAAT|frameshift_variant;DDX5|p.D572Nfs*6|1|0.04|ENSG00000108654|chr17:64500054-64500055|-/TGACAAGATAGTT|frameshift_variant;DDX5|p.R502Gfs*87|1|0.21|ENSG00000108654|chr17:64500264-64500264|T/-|frameshift_variant;ENSG00000100201|ENST00000403230|DDX17;ENSG00000108654|ENST00000225792|DDX5;ENST00000216019.11_1_22:38888049-38902242:-|nuORF;ENST00000432525.5_1_22:38886367-38903636:-|nuORF;ENST00000581230.5_1_17:62498125-62502378:-|nuORF;ENST00000583894.1_1_17:62499542-62500133:-|nuORF;nc|ENSG00000100201|Q92841-1|DDX17;nc|ENSG00000100201|Q92841-2|DDX17;nc|ENSG00000100201|Q92841-3|DDX17;nc|ENSG00000108654|P17844-2|DDX5	162.25246889848123	0.006148762295087652	1				NaN	NaN	0	NaN	3425	3610	7032
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7038	24.04	NaN	2283.3	30	0	422.21	0.106	+			42531	TARAKKPG	8	48	414.75601129644923	NaN	0	414.75634765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TARAKKPG_	ENSG00000158806|ENST00000518119|NPM2	26.79610172149135	1.7418937515398478	1				NaN	NaN	0	NaN	3426	3610	7032
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7039	24.042	NaN	3347.3	30	0	584.93	0.037	+			44377	TSLDKFYRK	9	67	579.3199778549872	NaN	0	579.3197021484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TSLDKFYRK_	ENSG00000034152|ENST00000342679|MAP2K3;MAP2K3|p.Q288Sfs*19|1|0.24|ENSG00000034152|chr17:21312224-21312224|C/-|frameshift_variant;nc|ENSG00000034152|P46734-2|MAP2K3;nc|ENSG00000034152|P46734-3|MAP2K3	72.87924865735499	0.09578366712754152	1				NaN	NaN	0	NaN	3427	3610	7032
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7051	24.068	NaN	12682	30	0	1804.1	0.214	+			14724	GTISAITSK	9	56	439.2530299605298	876.4915069878596	2	439.25299072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTISAITSK_	ENSG00000145113|ENST00000463781|MUC4;MUC4|p.L3985Ffs*274|1|0.3|ENSG00000145113|chr3:195779627-195779627|G/-|frameshift_variant;MUC4|p.N4902Tfs*8|1|0.37|ENSG00000145113|chr3:195761027-195761027|T/-|frameshift_variant;nc|ENSG00000145113|Q99102-10|MUC4;nc|ENSG00000145113|Q99102-11|MUC4;nc|ENSG00000145113|Q99102-15|MUC4;nc|ENSG00000145113|Q99102-16|MUC4;nc|ENSG00000145113|Q99102-17|MUC4;nc|ENSG00000145113|Q99102-2|MUC4;nc|ENSG00000145113|Q99102-3|MUC4;nc|ENSG00000145113|Q99102-5|MUC4;nc|ENSG00000145113|Q99102-7|MUC4;nc|ENSG00000145113|Q99102-8|MUC4;nc|ENSG00000145113|Q99102-9|MUC4	154.1183686248401	0.005909203230691971	1				NaN	NaN	0	NaN	3436	3613	7050
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7052	24.072	NaN	4770.7	30	0	663.36	0.106	+			13811	GQNPTNAEVLK	11	70	585.809108509016	1169.603664084832	2	585.8098754882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GQNPTNAEVLK_	ENSG00000092841|ENST00000550697|MYL6;ENSG00000196465|ENST00000695999|MYL6B;ENST00000405661.8_1_12:56547702-56549525:+|nuORF;ENST00000546630.1_1_12:56552185-56553570:+|nuORF;ENST00000547703.5_1_12:56552185-56553570:+|nuORF;ENST00000548725.5_1_12:56552185-56553955:+|nuORF;ENST00000549178.5_1_12:56548807-56551507:+|nuORF;ENST00000550152.5_1_12:56547702-56549709:+|nuORF;nc|ENSG00000092841|P60660-2|MYL6	97.59673978297657	0.06767575942783079	1				NaN	NaN	0	NaN	3437	3613	7050
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7053	24.074	NaN	3628.8	30	0	1645.5	0.106				-1	MGLSIFALL	9	28	327.5223814636374	NaN	0	327.5223388671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))GLSIFALL_	CHRNB1|p.Q341Lfs*49|1|0.23|ENSG00000170175|chr17:7454497-7454498|-/T|frameshift_variant;ENSG00000170175|ENST00000306071|CHRNB1;ENST00000573209.1_1_17:7350776-7358776:+|nuORF;nc|ENSG00000170175|P11230-2|CHRNB1	20.94693142431847	0.3660861156085067	1				NaN	NaN	0	NaN	3438	3613	7050
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7054	24.076	NaN	1618.4	30	0	223.08	0.106			+	-1	PFVCVTAAV	9	51	482.2524646482078	962.4903763632157	2	482.252685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_PFVC(Carbamidomethyl (C))VTAAV_	REV__ENST00000274891.10_1_6:57182455-57183235:+|nuORF	37.15910966729921	0.4535818937225704	1				NaN	NaN	0	NaN	3439	3613	7050
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7055	24.077	NaN	2600.4	30	0	483.71	0.106	+			35092	SAFVRILTT	9	44	336.5341830255446	1006.580719676834	3	336.5343322753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SAFVRILTT_	tr|U7STN1|U7STN1_FUSNU23SrRNA(-C5)-methyltransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01407PE=3SV=1	23.04248740728303	0.5879033540491928	1				NaN	NaN	0	NaN	3440	3613	7050
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7056	24.079	NaN	2128.6	30	0	236.65	0.106	+			14126	GSLRPFVQK	9	68	516.3040098789567	NaN	0	516.3043823242188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GSLRPFVQK_	ENSG00000112297|ENST00000633556|CRYBG1;nc|ENSG00000112297|Q9Y4K1-1|CRYBG1;nc|ENSG00000112297|Q9Y4K1-2|CRYBG1	71.87747018426188	0.0992163553043454	1				NaN	NaN	0	NaN	3441	3613	7050
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7057	24.081	NaN	2353.4	30	0	270.51	0.037	+			48545	VTNWDDMEK	9	50	577.2450588811353	1152.4755648290704	2	577.2461547851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_VTNWDDM(Oxidation (M))EK_	ACTB|p.I85T|1|0.1|ENSG00000075624|chr7:5529270-5529270|A/G|missense_variant;ENSG00000075624|ENST00000646664|ACTB;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENST00000436287.1_1_1:224052226-224052508:-|nuORF;ENST00000457622.1_1_6:46172676-46173294:+|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000502306.1_1_5:15450853-15451165:+|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF	53.08895987439943	0.27122541748218487	1				NaN	NaN	0	NaN	3442	3613	7050
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7065	24.099	NaN	6815.7	30	0	961.87	0.214	+			23254	KYISKPENL	9	74	546.3080960393	1090.6016391454	2	546.3087768554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KYISKPENL_	ENSG00000102547|ENST00000409308|CAB39L;ENSG00000135932|ENST00000258418|CAB39;ENST00000493540.1_1_2:231678823-231682621:+|nuORF	112.10723106719422	0.02684780151337622	1				NaN	NaN	0	NaN	3447	3616	7064
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7066	24.103	NaN	4605.2	30	0	441.43	0.106	+			47620	VSAGAESLNTP	11	69	523.2617652556191	1044.5089775780382	2	523.2678833007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSAGAESLNTP_	ENST00000338972.8_2_5:43557460-43557652:-|nuORF	86.18897241530135	0.11437590510873513	1				NaN	NaN	0	NaN	3448	3616	7064
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7067	24.105	NaN	2491.9	30	0	207.48	0.106	+			31195	QGQCGPLV	8	54	429.71047910567495	857.4064052781499	2	429.7101745605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_QGQC(Carbamidomethyl (C))GPLV_	ENST00000445792.7_1_X:305849-322301:-|nuORF	44.53106598305862	0.628196326904373	1				NaN	NaN	0	NaN	3449	3616	7064
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7068	24.107	NaN	935.12	30	0	167.4	0.106			+	25600	LQKQSRPGV	9	44	506.79766845703125	NaN	0	506.79766845703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LQKQSRPGV_	REV__ENSG00000185115|ENST00000332303|NSMCE3	37.15910966729921	0.2899585034171616	1				NaN	NaN	0	NaN	3450	3616	7064
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7069	24.109	NaN	3585.8	30	0	1884.2	0.106				-1	GTCSPKWPL	9	38	349.17585563476894	1044.505737504507	3	349.1761474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_GTC(Carbamidomethyl (C))SPKWPL_	ENST00000361832.2_1_10:102045868-102046416:-|nuORF;ENST00000370372.6_2_10:102045868-102046379:-|nuORF	20.94693142431847	0.6074874384046576	1				NaN	NaN	0	NaN	3451	3616	7064
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7070	24.11	NaN	1346.6	30	0	173.46	0.106				-1	LSQLQCSGMV	10	47	561.7669432294488	1121.5193335256974	2	561.767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_LSQLQC(Carbamidomethyl (C))SGMV_	ENSG00000196586|ENST00000369977|MYO6;nc|ENSG00000196586|Q9UM54-2|MYO6;nc|ENSG00000196586|Q9UM54-4|MYO6;nc|ENSG00000196586|Q9UM54-5|MYO6;nc|ENSG00000196586|Q9UM54-6|MYO6;nc|ENSG00000196586|Q9UM54|MYO6	30.317721548370564	0.6322445173429027	1				NaN	NaN	0	NaN	3452	3616	7064
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7071	24.112	NaN	949.18	30	0	140	0.036				-1	IEKMVVSAIV	10	41	552.8227121239194	NaN	0	552.8226928710938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_IEKM(Oxidation (M))VVSAIV_	ENST00000444901.1_1_21:14899938-14900730:+|nuORF;ENST00000580193.1_1_18:14630000-14630792:-|nuORF	26.69291269510374	0.4125295221340092	1				NaN	NaN	0	NaN	3453	3616	7064
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7081	24.134	NaN	10093	30	0	1848.4	0.214	+			40919	SVFQTTDTK	9	71	513.7588364464527	1025.5031199597054	2	513.7587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVFQTTDTK_	ENSG00000153130|ENST00000608372|SCOC;nc|ENSG00000153130|Q9UIL1-2|SCOC;nc|ENSG00000153130|Q9UIL1-3|SCOC;nc|ENSG00000153130|Q9UIL1-4|SCOC;nc|ENSG00000153130|Q9UIL1|SCOC	133.9934435666947	0.013297982075521412	1				NaN	NaN	0	NaN	3460	3619	7080
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7082	24.138	NaN	5592	30	0	3224.1	0.106			+	32575	QWQILVSS	8	59	480.7607003679945	959.506847802789	2	480.7608337402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QWQILVSS_	REV__ENSG00000146555|ENST00000404826|SDK1;REV__ENST00000476701.5_1_7:4169443-4308379:+|nuORF;REV__nc|ENSG00000146555|Q7Z5N4-3|SDK1;REV__SDK1|p.V1762Wfs*2|1|0.28|ENSG00000146555|chr7:4208168-4208168|G/-|frameshift_variant	40.5726180659479	0.6527593143185008	1				NaN	NaN	0	NaN	3461	3619	7080
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7083	24.14	NaN	3358	30	0	421.9	0.106	+			1452	AFANSGNAI	9	54	453.71931261311227	905.4240722930246	2	453.7192077636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))AFANSGNAI_	ENSG00000055483|ENST00000449938|USP36;USP36|p.K688Nfs*35|1|0.21|ENSG00000055483|chr17:78806980-78806980|T/-|frameshift_variant;USP36|p.P187S|1|0.33|ENSG00000055483|chr17:78828924-78828924|G/A|missense_variant	76.7741389293348	0.11149722112137898	1				NaN	NaN	0	NaN	3462	3619	7080
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7084	24.141	NaN	3229.6	30	0	255.41	0.106	+			36225	SELVQKAKL	9	62	508.31073248892335	1014.6069120446467	2	508.3109130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SELVQKAKL_	ENSG00000166913|ENST00000353703|YWHAB;nc|ENSG00000166913|P31946-2|YWHAB	90.60085204095205	0.06317133949006545	1				NaN	NaN	0	NaN	3463	3619	7080
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7085	24.143	NaN	1253	30	0	333.01	0.106			+	-1	KLMFGEKK	8	46	498.7810871523602	995.5476213715204	2	498.78076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_KLM(Oxidation (M))FGEKK_	REV__ENST00000604204.1_1_6:3023831-3023987:-|nuORF	40.77816245573522	0.6514838689002179	1				NaN	NaN	0	NaN	3464	3619	7080
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7086	24.145	NaN	5703.4	30	0	1839.8	0.106	+			10100	ESLKVALQK	9	62	339.209544536453	1014.606804209559	3	339.20953369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ESLKVALQK_	ENSG00000130695|ENST00000451429|CEP85;nc|ENSG00000130695|Q6P2H3-4|CEP85;nc|ENSG00000130695|Q6P2H3|CEP85	54.722347961057174	0.257609425301511	1				NaN	NaN	0	NaN	3465	3619	7080
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7087	24.147	NaN	1457	30	0	126.29	0.032	+			26111	LSPAISKG	8	43	386.73183177110974	771.4491106090195	2	386.73193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSPAISKG_	ENST00000424435.1_1_1:154375977-154376226:-|nuORF	42.47446043378293	0.6409579893742323	1				NaN	NaN	0	NaN	3466	3619	7080
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7097	24.169	NaN	20431	30	0	5205.4	0.214	+			28198	NASRDQVVY	9	67	526.2631273918574	1050.5117018505148	2	526.2622680664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NASRDQVVY_	ENSG00000167608|ENST00000619895|TMC4;nc|ENSG00000167608|Q7Z404-1|TMC4;nc|ENSG00000167608|Q7Z404|TMC4;TMC4|p.F240Lfs*221|1|0.42|ENSG00000167608|chr19:54168267-54168268|AA/-|frameshift_variant;TMC4|p.Q383Rfs*6|1|0.37|ENSG00000167608|chr19:54163872-54163872|G/-|frameshift_variant	72.87924865735499	0.12833875048249987	1				NaN	NaN	0	NaN	3473	3622	7096
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7098	24.172	NaN	6076.4	30	0	1426.1	0.106	+			14464	GTCFGKFTK	9	68	523.2617652556191	1044.5089775780382	2	523.2615356445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GTC(Carbamidomethyl (C))FGKFTK_	ENSG00000132603|ENST00000254940|NIP7;ENST00000565034.1_1_16:69373956-69375289:+|nuORF;nc|ENSG00000132603|Q9Y221-2|NIP7	63.53385203322761	0.18415635464017938	1				NaN	NaN	0	NaN	3474	3622	7096
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7099	24.174	NaN	5620.6	30	0	1478.7	0.106	+			5851	AVIPNCGTPK	10	63	528.7790575393802	1055.5435621455604	2	528.779541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_AVIPNC(Carbamidomethyl (C))GTPK_	ENSG00000168386|ENST00000477258|FILIP1L;nc|ENSG00000168386|Q4L180-2|FILIP1L;nc|ENSG00000168386|Q4L180-3|FILIP1L;nc|ENSG00000168386|Q4L180-5|FILIP1L;nc|ENSG00000168386|Q4L180-6|FILIP1L;nc|ENSG00000168386|Q4L180-7|FILIP1L;nc|ENSG00000168386|Q4L180|FILIP1L	44.377184641726394	0.5088115166961078	1				NaN	NaN	0	NaN	3475	3622	7096
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7100	24.176	NaN	2197.6	30	0	710.3	0.106				-1	MSKKIEINI	9	37	364.5411539483874	NaN	0	364.54119873046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_M(Oxidation (M))SKKIEINI_	ENST00000544750.1_1_11:113745483-113745573:-|nuORF	35.15202426646627	0.3000918603816441	1				NaN	NaN	0	NaN	3476	3622	7096
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7101	24.178	NaN	2612	30	0	1393.9	0.106	+			47036	VLDIRKNL	8	29	324.2063354397136	969.5971769193409	3	324.2062683105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VLDIRKNL_	CEP78|p.P295L|1|0.14|ENSG00000148019|chr9:78246774-78246774|C/T|missense_variant	13.775330524044264	0.789990904165365	1				NaN	NaN	0	NaN	3477	3622	7096
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7102	24.18	NaN	1891.2	30	0	293.7	0.106	+			42227	TAALAHTSY	9	46	467.73504344443944	933.4555339556789	2	467.7345886230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TAALAHTSY_	ENSG00000205277|ENST00000536621|MUC12;nc|ENSG00000205277|Q9UKN1|MUC12	96.19043198914106	0.047412499214244314	1				NaN	NaN	0	NaN	3478	3622	7096
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7103	24.181	NaN	873.98	30	0	173.94	0.034			+	9525	ELALKGSTV	9	43	459.2686767578125	NaN	0	459.2686767578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ELALKGSTV_	REV__ENST00000260361.8_2_15:41694416-41694521:-|nuORF	30.317721548370564	0.32449924987115025	1				NaN	NaN	0	NaN	3479	3622	7096
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7109	24.197	NaN	5537.1	30	0	1177.7	0.214			+	-1	IGHKLSCCL	9	52	344.17816595935676	1029.5126684782704	3	344.17816162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_IGHKLSC(Carbamidomethyl (C))CL_	REV__ENSG00000142207|ENST00000382751|URB1	20.94693142431847	0.6074874384046576	1				NaN	NaN	0	NaN	3482	3625	7108
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7110	24.201	NaN	1149.9	30	0	183.6	0.037			+	18283	IPLPKAADLAR	11	49	582.8585471428494	1163.7025413524987	2	582.8584594726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IPLPKAADLAR_	REV__ENSG00000135999|ENST00000258484|EPC2;REV__EPC2|p.E70Rfs*39|1|0.32|ENSG00000135999|chr2:148690260-148690260|A/-|frameshift_variant	20.83715455343099	0.7712264395190968	1				NaN	NaN	0	NaN	3483	3625	7108
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7117	24.219	NaN	7794.6	30	0	1324.8	0.214	+			29258	NYARGHYTI	9	68	547.7721475663211	1093.5297421994421	2	547.7730102539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NYARGHYTI_	ENSG00000075886|ENST00000321253|TUBA3D;ENSG00000123416|ENST00000336023|TUBA1B;ENSG00000127824|ENST00000248437|TUBA4A;ENSG00000152086|ENST00000312988|TUBA3E;ENSG00000167552|ENST00000301071|TUBA1A;ENSG00000167553|ENST00000301072|TUBA1C;ENSG00000198033|ENST00000400113|TUBA3C;ENST00000462806.5_1_2:220116196-220118580:-|nuORF;ENST00000530835.1_1_11:90015825-90016947:+|nuORF;ENST00000548363.1_1_12:49580068-49582762:-|nuORF;ENST00000550254.1_1_12:49580068-49580335:-|nuORF;nc|ENSG00000127824|P68366-2|TUBA4A;nc|ENSG00000167552|Q71U36-2|TUBA1A;nc|ENSG00000198033|P0DPH7-2|TUBA3C;TUBA3C|p.G144Afs*24|1|0.32|ENSG00000198033|chr13:19177554-19177554|A/-|frameshift_variant;TUBA3C|p.T361Rfs*18|1|0.17|ENSG00000198033|chr13:19174136-19174136|G/-|frameshift_variant;TUBA3D|p.G366Efs*13|1|0.17|ENSG00000075886|chr2:131482588-131482588|G/-|frameshift_variant;TUBA3D|p.V328Pfs*54|1|0.45|ENSG00000075886|chr2:131480665-131480666|-/CCCAAAGA|frameshift_variant;TUBA3E|p.Q176Rfs*14|1|0.58|ENSG00000152086|chr2:130194316-130194316|G/-|frameshift_variant;TUBA4A|p.V182Gfs*32|1|0.04|ENSG00000127824|chr2:219251156-219251157|-/TACACCA|frameshift_variant	69.6276240434122	0.14239879520340665	1				NaN	NaN	0	NaN	3487	3628	7116
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7118	24.223	NaN	11020	30	0	6597.8	0.106			+	-1	MAQFVSVQK	9	53	351.8521121721299	1052.5345071165898	3	351.8502197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_M(Oxidation (M))AQFVSVQK_	REV__ENSG00000261150|ENST00000615648|EPPK1;REV__EPPK1|p.G2015Vfs*36|2|0.33|ENSG00000261150|chr8:143867210-143867210|C/-|frameshift_variant	36.446750945000026	0.4619375763483977	1				NaN	NaN	0	NaN	3488	3628	7116
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7119	24.225	NaN	6246.3	30	0	1974.7	0.106	+			41963	SVWHGTLSK	9	47	338.8502590259311	1013.5289476779933	3	338.8503112792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVWHGTLSK_	ENSG00000136270|ENST00000258770|TBRG4;nc|ENSG00000136270|Q969Z0-2|TBRG4;TBRG4|p.L492Cfs*9|2|0.32|ENSG00000136270|chr7:45101918-45101918|G/-|frameshift_variant	19.996771675451527	0.6112419832031292	1				NaN	NaN	0	NaN	3489	3628	7116
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7120	24.226	NaN	2132.7	30	0	497.92	0.106			+	-1	HQCCVRSVS	9	44	538.2412565030805	1074.467960072961	2	538.2418823242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_HQC(Carbamidomethyl (C))CVRSVS_	REV__ENST00000369393.7_1_6:90354848-90357787:-|nuORF	21.9598887501803	0.5980208138527809	1				NaN	NaN	0	NaN	3490	3628	7116
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7121	24.228	NaN	1023.6	30	0	276.91	0.106				-1	 	0	35	384.7720625920663	767.5295722509326	2	384.7720642089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	3491	3628	7116
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7122	24.23	NaN	1987.4	30	0	449.69	0.106			+	43885	TMVRIGIPAL	10	62	535.8231813259562	NaN	0	535.8234252929688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TMVRIGIPAL_	REV__ENSG00000072506|ENST00000168216|HSD17B10	37.15910966729921	0.3781637092648983	1				NaN	NaN	0	NaN	3492	3628	7116
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7123	24.232	NaN	1242.1	30	0	116.97	0.033			+	36698	SGRTMSTK	8	45	434.2214471567088	866.4283413802176	2	434.22149658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SGRTMSTK_	REV__ENST00000592828.5_1_19:11687597-11687906:-|nuORF	30.503639358989545	0.7238069182250283	1				NaN	NaN	0	NaN	3493	3628	7116
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7132	24.253	NaN	3597.3	30	0	526.54	0.214	+			41753	SVSLPSVKK	9	60	472.7923683454829	943.5701837577658	2	472.7920227050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSLPSVKK_	ENSG00000034677|ENST00000341084|RNF19A;nc|ENSG00000034677|Q9NV58-2|RNF19A;nc|ENSG00000034677|Q9NV58-3|RNF19A;RNF19A|p.R63Efs*5|1|0.16|ENSG00000034677|chr8:100287988-100287988|T/-|frameshift_variant	79.71258880314673	0.09879134589249085	1				NaN	NaN	0	NaN	3499	3631	7131
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7133	24.257	NaN	1901.4	30	0	290.8	0.106	+			50679	YEEGPGKNL	9	60	503.74575356366825	1005.4769541941365	2	503.74560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YEEGPGKNL_	ENSG00000127184|ENST00000247655|COX7C	51.19269402634007	0.2889735674168909	1				NaN	NaN	0	NaN	3500	3631	7131
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7134	24.259	NaN	1571	30	0	138.12	0.106	+			37627	SLQEVTIHEK	10	61	592.3196249680456	1182.624697002891	2	592.3193969726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLQEVTIHEK_	ENSG00000153107|ENST00000341068|ANAPC1;ENST00000426186.1_3_2:87098444-87121919:+|nuORF;ENST00000467878.1_1_2:112638162-112638411:-|nuORF;ENST00000489177.1_1_2:112630836-112638411:-|nuORF	84.31045756130733	0.1636476603981187	1				NaN	NaN	0	NaN	3501	3631	7131
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7135	24.261	NaN	2007.9	30	0	198.25	0.106			+	9736	ENASERPIK	9	60	522.27571860495	1042.5368842767	2	521.7701416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ENASERPIK_	REV__tr|U7SPA8|U7SPA8_FUSNUDipeptidaseDOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01683PE=4SV=1	49.536043120802724	0.308405419312776	1				NaN	NaN	0	NaN	3502	3631	7131
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7136	24.263	NaN	1475.9	30	0	405.27	0.106			+	28259	NDKNNGLS	8	44	431.2053327449693	NaN	0	431.20562744140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NDKNNGLS_	REV__ENSG00000083444|ENST00000196061|PLOD1;REV__nc|ENSG00000083444|Q02809-2|PLOD1	29.14955571784316	1.7418937515398478	1				NaN	NaN	0	NaN	3503	3631	7131
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7137	24.264	NaN	1004.9	30	0	130.94	0.036	+			33275	RGILAKIEGQ	10	43	542.826817063595	1083.6390811939898	2	542.825927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RGILAKIEGQ_	ENST00000404600.2_1_6:1514778-1515111:-|nuORF	41.42661286455405	0.5359995577334734	1				NaN	NaN	0	NaN	3504	3631	7131
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7144	24.281	NaN	13762	30	0	6967.1	0.214			+	-1	LSCVRSLSL	9	61	345.52674841299824	1033.5584158391948	3	345.52667236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_LSC(Carbamidomethyl (C))VRSLSL_	REV__ENST00000344111.3_1_7:1007687-1008335:-|nuORF	44.377184641726394	0.36891676396732553	1				NaN	NaN	0	NaN	3508	3634	7143
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7145	24.285	NaN	3570.1	30	0	750.35	0.106	+			45168	TVMDKTRAL	9	47	517.7867613754449	1033.5589698176898	2	517.78662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVMDKTRAL_	CARD17-CASP1|1|fusion;CARD17-CASP1|2|fusion;CASP1|p.N205Ifs*7|1|0.4|ENSG00000137752|chr11:105030343-105030343|T/-|frameshift_variant;ENSG00000137752|ENST00000533400|CASP1;ENSG00000204397|ENST00000673097|CARD16;ENST00000526511.5_1_11:104901858-104905840:-|nuORF;ENST00000527065.1_1_11:104915107-104915377:-|nuORF;nc|ENSG00000137752|P29466-2|CASP1;nc|ENSG00000204397|Q5EG05|CARD16	77.31757898189308	0.1091473830098891	1				NaN	NaN	0	NaN	3509	3634	7143
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7146	24.287	NaN	3158.3	30	0	442.68	0.106	+			13379	GLASSPEKIV	10	47	334.19417744285045	999.5607029287514	3	334.1943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GLASSPEKIV_	ENSG00000063169|ENST00000594866|BICRA;nc|ENSG00000063169|Q9NZM4-2|BICRA	27.882242232435846	0.6521336255503853	1				NaN	NaN	0	NaN	3510	3634	7143
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7147	24.288	NaN	2306.3	30	0	287.76	0.106	+			1355	AEVEAQKAQQL	11	58	607.8220909383851	1213.6296289435702	2	607.82177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEVEAQKAQQL_	ENSG00000088325|ENST00000300403|TPX2;nc|ENSG00000088325|Q9ULW0-2|TPX2	79.48907831485694	0.15663227531959176	1				NaN	NaN	0	NaN	3511	3634	7143
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7148	24.29	NaN	2618.8	30	0	265.8	0.106	+			21191	KLCGRYIRIY	10	65	642.8671152315776	1283.719677529955	2	642.8671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KLCGRYIRIY_	ENST00000267294.4_1_13:100617617-100617761:-|nuORF	29.14955571784316	0.6417842315402807	1				NaN	NaN	0	NaN	3512	3634	7143
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7149	24.292	NaN	1098.9	30	0	82.292	0.034	+			47748	VSGLVTRAL	9	45	458.28474210902993	914.5549312848599	2	458.78558349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VSGLVTRAL_	ENSG00000125454|ENST00000416858|SLC25A19;nc|ENSG00000125454|Q9HC21-2|SLC25A19;SLC25A19|p.G74Vfs*17|1|0.08|ENSG00000125454|chr17:75286371-75286371|C/-|frameshift_variant;SLC25A19|p.T164Pfs*19|1|0.3|ENSG00000125454|chr17:75278306-75278306|C/-|frameshift_variant	34.172542307311794	0.4838870758800184	1				NaN	NaN	0	NaN	3513	3634	7143
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7158	24.314	NaN	11543	30	0	2628.7	0.215			+	40658	SVARGHEAGGL	11	75	351.8521121721299	1052.5345071165898	3	352.18853759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVARGHEAGGL_	REV__ENST00000607058.1_1_8:24771141-24771990:-|nuORF	40.77816245573522	0.5472954108598816	1				NaN	NaN	0	NaN	3519	3637	7157
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7159	24.317	NaN	2121.4	30	0	230.91	0.106	+			1629	AGMTVRSI	8	54	417.72873426178376	833.4429155903675	2	417.7287292480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AGMTVRSI_	ENST00000494623.1_1_2:86734536-86737699:-|nuORF	52.29916861842294	0.578018602984656	1				NaN	NaN	0	NaN	3520	3637	7157
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7160	24.319	NaN	2782.6	30	0	320.5	0.106	+			24564	LGMSMAVTI	9	50	477.7353566407477	953.4561603482954	2	477.73553466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Oxidation (M)	_LGM(Oxidation (M))SM(Oxidation (M))AVTI_	ENSG00000232268|ENST00000530443|OR52I1	57.81127852772723	0.2318599694398087	1				NaN	NaN	0	NaN	3521	3637	7157
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7161	24.321	NaN	1547	30	0	261.61	0.106			+	47523	VQPNINGLY	9	54	509.27315717737736	1016.5317614215547	2	509.27301025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VQPNINGLY_	REV__ENST00000470400.5_1_3:142720470-142740424:+|nuORF	40.5726180659479	0.4135428067754104	1				NaN	NaN	0	NaN	3522	3637	7157
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7162	24.323	NaN	895.17	30	0	92.305	0.106	+			41340	SVLTSKNQI	9	38	495.2845933266438	988.5546337200876	2	495.28466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVLTSKNQI_	DNAJC8|p.Q140Tfs*15|1|0.4|ENSG00000126698|chr1:28208395-28208396|-/T|frameshift_variant;ENSG00000126698|ENST00000263697|DNAJC8;ENST00000482674.5_1_1:28537058-28559509:-|nuORF;ENST00000488868.1_1_1:28537058-28556683:-|nuORF;ENST00000489277.5_1_1:28527761-28556683:-|nuORF	36.446750945000026	0.4619375763483977	1				NaN	NaN	0	NaN	3523	3637	7157
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7163	24.324	NaN	2027.4	30	0	530.73	0.106	+			4564	ATLEETLVKKK	11	54	630.3823852539062	NaN	0	630.3823852539062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATLEETLVKKK_	ENSG00000254093|ENST00000314787|PINX1	59.26467630326872	0.23991231615472114	1				NaN	NaN	0	NaN	3524	3637	7157
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7164	24.326	NaN	2652.5	30	0	584.19	0.036				-1	VGNKMVKAR	9	43	340.19784897768	1017.57171753324	3	340.1976013183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_VGNKM(Oxidation (M))VKAR_	ENSG00000186522|ENST00000397712|SEPTIN10;ENST00000468616.5_1_2:110303765-110325397:-|nuORF;ENST00000483047.5_1_2:110321941-110325397:-|nuORF;ENST00000517342.1_1_8:57389817-57390279:-|nuORF;nc|ENSG00000186522|Q9P0V9-2|SEPTIN10;nc|ENSG00000186522|Q9P0V9-3|SEPTIN10	19.996771675451527	0.6112419832031292	1				NaN	NaN	0	NaN	3525	3637	7157
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7174	24.348	NaN	3613.3	30	0	426.17	0.214			+	40882	SVFIEMTIV	9	60	527.7788464923475	NaN	0	527.7794799804688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_SVFIEM(Oxidation (M))TIV_	REV__ENST00000396408.7_1_19:53911016-53911145:+|nuORF	65.80317337860623	0.12456833308499304	1				NaN	NaN	0	NaN	3532	3640	7173
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7175	24.352	NaN	1955.4	30	0	214.72	0.106	+			16871	HPGQISAGY	9	58	465.2275499927959	928.4405470523918	2	465.2273254394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HPGQISAGY_	ENSG00000101210|ENST00000217182|EEF1A2;ENSG00000156508|ENST00000309268|EEF1A1;ENST00000436459.2_1_9:135895553-135896258:+|nuORF;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	96.19043198914106	0.047412499214244314	1				NaN	NaN	0	NaN	3533	3640	7173
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7176	24.354	NaN	1686.8	30	0	219.56	0.106	+			42842	TEEQVQRSL	9	54	545.2802853169769	1088.5460177007537	2	545.2808837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TEEQVQRSL_	ENSG00000261150|ENST00000615648|EPPK1;EPPK1|p.G2015Vfs*36|2|0.33|ENSG00000261150|chr8:143867210-143867210|C/-|frameshift_variant;EPPK1|p.L1122I|1|0.14|ENSG00000261150|chr8:143869890-143869890|G/T|missense_variant	49.536043120802724	0.308405419312776	1				NaN	NaN	0	NaN	3534	3640	7173
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7177	24.355	NaN	1187.4	30	0	208.25	0.035			+	-1	TKSTPKCY	8	47	492.744314497349	983.4740760614981	2	492.74517822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_TKSTPKC(Carbamidomethyl (C))Y_	REV__ENSG00000197943|ENST00000564138|PLCG2	25.450171626174864	0.7628259754767981	1				NaN	NaN	0	NaN	3535	3640	7173
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7184	24.372	NaN	972.79	30	0	155.71	0.214			+	49162	VVMPFHVGL	9	43	499.7761094575036	997.5376659818072	2	499.77618408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVMPFHVGL_	REV__ENST00000429033.1_1_21:32433463-32434067:-|nuORF	29.841539824830324	0.5243625958137083	1				NaN	NaN	0	NaN	3539	3643	7183
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7185	24.375	NaN	1688.2	30	0	181.82	0.106			+	19241	KAAVIVSRDF	10	58	553.3242975072135	NaN	0	553.324462890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KAAVIVSRDF_	REV__ENSG00000198589|ENST00000651943|LRBA;REV__LRBA|p.L2590*|1|0.41|ENSG00000198589|chr4:150310342-150310342|A/-|frameshift_variant;REV__LRBA|p.T2011Qfs*11|1|0.19|ENSG00000198589|chr4:150599022-150599022|T/-|frameshift_variant;REV__nc|ENSG00000198589|P50851-2|LRBA;REV__nc|ENSG00000198589|P50851|LRBA	38.753607047826485	0.3729281687199363	1				NaN	NaN	0	NaN	3540	3643	7183
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7186	24.377	NaN	779.53	30	0	75.749	0.106			+	47401	VPLTGQLK	8	42	428.2685631393382	854.5225733454764	2	428.2682189941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VPLTGQLK_	REV__C5|p.W1228Gfs*21|1|0.25|ENSG00000106804|chr9:120976882-120976882|A/-|frameshift_variant;REV__CON__Q1A7A4;REV__ENSG00000106804|ENST00000223642|C5	31.954861631926434	0.7126016770032289	1				NaN	NaN	0	NaN	3541	3643	7183
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7187	24.379	NaN	2451.9	30	0	354.33	0.106	+			40033	STMVDVRVMKK	11	56	647.3544701064293	1292.6943872796585	2	647.8563842773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STMVDVRVMKK_	ENSG00000085224|ENST00000373344|ATRX;nc|ENSG00000085224|P46100-2|ATRX;nc|ENSG00000085224|P46100-3|ATRX;nc|ENSG00000085224|P46100-4|ATRX;nc|ENSG00000085224|P46100-5|ATRX	33.54155758786652	0.6379676125710366	1				NaN	NaN	0	NaN	3542	3643	7183
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7188	24.381	NaN	1928	30	0	471.03	0.038			+	43911	TNTQFLRCAY	10	40	608.7925005724927	1215.5704482117853	2	608.7935791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TNTQFLRCAY_	REV__ATP11C|p.F897Lfs*13|1|0.07|ENSG00000101974|chrX:139757826-139757827|-/TTTTTGT|frameshift_variant;REV__ENSG00000101974|ENST00000682941|ATP11C;REV__ENST00000460773.5_1_X:138814597-138879340:-|nuORF;REV__nc|ENSG00000101974|Q8NB49-2|ATP11C;REV__nc|ENSG00000101974|Q8NB49-3|ATP11C;REV__nc|ENSG00000101974|Q8NB49-4|ATP11C;REV__nc|ENSG00000101974|Q8NB49|ATP11C	17.468008924990375	0.7276870902328821	1				NaN	NaN	0	NaN	3543	3643	7183
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7196	24.401	NaN	11797	30	0	5319.1	0.214	+			45091	TVIHFNNPK	9	62	357.1976480452465	1068.5711147359395	3	357.1978454589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVIHFNNPK_	ENSG00000134717|ENST00000313334|BTF3L4;ENSG00000145741|ENST00000380591|BTF3;ENST00000418879.1_1_6:137865036-137865375:-|nuORF;nc|ENSG00000134717|Q96K17-2|BTF3L4;nc|ENSG00000145741|P20290-2|BTF3	37.81151784470057	0.4459294069877048	1				NaN	NaN	0	NaN	3548	3646	7195
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7197	24.404	NaN	3401.9	30	0	428.74	0.106			+	-1	LSSSQPCNIT	10	73	553.7595280665597	1105.5045031999193	2	553.7603149414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LSSSQPC(Carbamidomethyl (C))NIT_	REV__nc|ENSG00000273777|Q6UY09-3|CEACAM20;REV__nc|ENSG00000273777|Q6UY09-4|CEACAM20	78.26377905018397	0.20980573808910843	1				NaN	NaN	0	NaN	3549	3646	7195
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7198	24.406	NaN	1845.7	30	0	231.8	0.106	+			38986	SSSDLKYLK	9	62	520.7856452868893	1039.5567376405786	2	520.7855834960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSSDLKYLK_	ENST00000315554.12_3_1:22379221-22404982:+|nuORF;ENST00000344548.7_3_1:22379221-22404982:+|nuORF	72.87924865735499	0.12833875048249987	1				NaN	NaN	0	NaN	3550	3646	7195
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7199	24.408	NaN	814.09	30	0	203.99	0.106	+			3293	ASLSGSLSAK	10	34	460.7558898925781	NaN	0	460.7558898925781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASLSGSLSAK_	ENST00000588822.1_1_17:74723429-74729181:+|nuORF;ENST00000589977.5_1_17:74725800-74729181:+|nuORF;ENST00000590964.5_1_17:74722977-74729181:+|nuORF	27.047317107675042	0.41136583337917604	1				NaN	NaN	0	NaN	3551	3646	7195
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7200	24.41	NaN	1457.5	30	0	198.37	0.106			+	27641	MPRGERPM	8	44	487.2383159515851	972.4620789699702	2	487.2386169433594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MPRGERPM_	REV__ENSG00000006468|ENST00000430479|ETV1;REV__ENST00000472931.6_1_7:13946033-14025001:-|nuORF;REV__nc|ENSG00000006468|P50549-2|ETV1;REV__nc|ENSG00000006468|P50549-3|ETV1;REV__nc|ENSG00000006468|P50549-4|ETV1;REV__nc|ENSG00000006468|P50549-5|ETV1;REV__nc|ENSG00000006468|P50549-6|ETV1	47.91560031466742	0.6071945918984287	1				NaN	NaN	0	NaN	3552	3646	7195
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7201	24.412	NaN	1762.3	30	0	188.57	0.106	+			26026	LSLFLLALH	9	56	513.8193776642512	1025.6242023953023	2	513.819091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSLFLLALH_	VSTM2B|p.L271F|1|0.32|ENSG00000187135|chr19:29563887-29563887|C/T|missense_variant	44.116797842482775	0.37197099687881774	1				NaN	NaN	0	NaN	3553	3646	7195
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7202	24.414	NaN	2421.7	30	0	932.79	0.035			+	-1	SVIGTLTMR	9	41	331.85029506244194	NaN	0	331.85009765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_SVIGTLTM(Oxidation (M))R_	REV__ENSG00000122861|ENST00000372764|PLAU;REV__nc|ENSG00000122861|P00749-2|PLAU;REV__PLAU|p.W396L|1|0.39|ENSG00000122861|chr10:73916456-73916456|G/T|missense_variant	29.170058357718403	0.3302935627494407	1				NaN	NaN	0	NaN	3554	3646	7195
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7213	24.439	NaN	2867.6	30	0	596.92	0.214	+			16718	HLFGPGKN	8	48	435.23481706298287	868.4550811927658	2	435.23486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HLFGPGKN_	ENSG00000122728|ENST00000242310|TAF1L;TAF1L|p.A852Pfs*14|1|0.21|ENSG00000122728|chr9:32633027-32633027|T/-|frameshift_variant;TAF1L|p.E1124*|1|0.35|ENSG00000122728|chr9:32632210-32632211|-/A|frameshift_variant;TAF1L|p.F1231Lfs*20|1|0.42|ENSG00000122728|chr9:32631887-32631887|A/-|frameshift_variant;TAF1L|p.F683Lfs*27|1|0.39|ENSG00000122728|chr9:32633531-32633531|A/-|frameshift_variant;TAF1L|p.F928Lfs*13|1|0.25|ENSG00000122728|chr9:32632796-32632796|A/-|frameshift_variant;TAF1L|p.K665Rfs*4|2|0.06|ENSG00000122728|chr9:32633586-32633586|T/-|frameshift_variant;TAF1L|p.S273Y|1|0.32|ENSG00000122728|chr9:32634762-32634762|G/T|missense_variant	29.841539824830324	0.7289191502596711	1				NaN	NaN	0	NaN	3562	3649	7212
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7214	24.443	NaN	2090.1	30	0	374.9	0.106	+			23160	KVYNGILEK	9	57	532.3109365776636	1062.607320222127	2	532.3108520507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVYNGILEK_	ENSG00000109689|ENST00000467087|STIM2;ENST00000467011.5_1_4:27022655-27024615:+|nuORF;nc|ENSG00000109689|Q9P246-2|STIM2;STIM2|p.S735Lfs*9|1|0.08|ENSG00000109689|chr4:27022958-27022959|-/TGTA|frameshift_variant	72.87924865735499	0.12833875048249987	1				NaN	NaN	0	NaN	3563	3649	7212
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7215	24.445	NaN	2653.3	30	0	510.59	0.106			+	12880	GERLCAVYL	9	59	540.7785237427092	1079.5424945522184	2	540.7811279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_GERLC(Carbamidomethyl (C))AVYL_	REV__ENSG00000095539|ENST00000210633|SEMA4G;REV__nc|ENSG00000095539|Q9NTN9|SEMA4G	42.396135135203025	0.392153681582562	1				NaN	NaN	0	NaN	3564	3649	7212
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7216	24.447	NaN	2950.3	30	0	365.07	0.106			+	9843	EPRESDLRKVL	11	60	671.3776544714885	1340.740756009777	2	671.3773193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EPRESDLRKVL_	REV__ENST00000409072.3_2_7:38725570-38725973:-|nuORF	20.83715455343099	0.7712264395190968	1				NaN	NaN	0	NaN	3565	3649	7212
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7217	24.448	NaN	2846.6	30	0	404.9	0.106	+			21606	KPLQPLPNT	9	39	336.53424695313777	NaN	0	336.5343322753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KPLQPLPNT_	ENSG00000241370|ENST00000442966|RPP21;ENST00000436442.2_2_6:30314274-30314587:+|nuORF;ENST00000473266.1_1_6:30313175-30314584:+|nuORF;ENST00000498414.5_1_6:30314081-30314584:+|nuORF;nc|ENSG00000241370|Q9H633-2|RPP21;nc|ENSG00000241370|Q9H633-4|RPP21	26.69291269510374	0.34280015626154364	1				NaN	NaN	0	NaN	3566	3649	7212
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7218	24.45	NaN	1724.2	30	0	238.37	0.106	+			19384	KAMEAASSL	9	52	454.2310628663924	906.4475727995848	2	454.2312927246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KAMEAASSL_	ENSG00000109685|ENST00000508803|NSD2;nc|ENSG00000109685|O96028-3|NSD2;nc|ENSG00000109685|O96028-5|NSD2	90.36981228632155	0.0638227155548745	1				NaN	NaN	0	NaN	3567	3649	7212
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7219	24.452	NaN	1023.6	30	0	186.66	0.032	+			2609	AQGVRSPL	8	41	414.24022295749154	826.4658929817831	2	414.2397155761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AQGVRSPL_	ENSG00000136111|ENST00000377636|TBC1D4;nc|ENSG00000136111|O60343-2|TBC1D4;nc|ENSG00000136111|O60343-3|TBC1D4	23.04248740728303	0.7814162927298575	1				NaN	NaN	0	NaN	3568	3649	7212
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7232	24.479	NaN	10849	30	0	898.95	0.215	+			49632	VYIEKNDKL	9	71	561.3133574851719	1120.6121620371437	2	561.8156127929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYIEKNDKL_	ENSG00000065361|ENST00000267101|ERBB3;ENST00000546884.1_1_12:56474084-56480451:+|nuORF;ENST00000549472.1_1_12:56480319-56481575:+|nuORF;ERBB3|p.A805Gfs*22|1|0.1|ENSG00000065361|chr12:56097177-56097178|-/G|frameshift_variant;ERBB3|p.A805Hfs*95|1|0.33|ENSG00000065361|chr12:56097178-56097178|G/-|frameshift_variant;ERBB3|p.R1080Vfs*22|1|0.14|ENSG00000065361|chr12:56101093-56101093|C/-|frameshift_variant;nc|ENSG00000065361|P21860-3|ERBB3;nc|ENSG00000065361|P21860-4|ERBB3	132.757866228626	0.013877640931359021	1				NaN	NaN	0	NaN	3578	3652	7231
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7233	24.483	NaN	4827.8	30	0	523.03	0.106	+			39967	STMGYMMAKK	10	75	574.2680433576378	1146.5215337820755	2	574.2689819335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STMGYMMAKK_	ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;ENST00000518337.1_1_8:74128289-74128592:-|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P	33.921630207806714	0.6028135429846169	1				NaN	NaN	0	NaN	3579	3652	7231
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7234	24.485	NaN	4027.7	30	0	455.59	0.106	+			42197	TAAETHYTY	9	61	528.7354355204153	1055.4563181076305	2	528.7354736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TAAETHYTY_	ENSG00000158773|ENST00000368021|USF1;ENST00000491629.5_1_1:161011414-161013065:-|nuORF;ENST00000529476.1_1_1:161011414-161013065:-|nuORF;nc|ENSG00000158773|P22415-2|USF1;USF1|p.G130Vfs*33|3|0.3|ENSG00000158773|chr1:161041734-161041734|C/-|frameshift_variant	116.90359126533652	0.02307425081617795	1				NaN	NaN	0	NaN	3580	3652	7231
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7235	24.487	NaN	1921.6	30	0	234.48	0.036			+	-1	FQCFMLRK	8	53	544.7719974631067	1087.5294419930133	2	544.7733154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_FQCFM(Oxidation (M))LRK_	REV__CCDC180|p.K1351Sfs*28|1|0.14|ENSG00000197816|chr9:97364063-97364063|C/-|frameshift_variant;REV__CCDC180|p.K1583Nfs*17|3|0.32|ENSG00000197816|chr9:97374551-97374551|C/-|frameshift_variant;REV__CCDC180|p.S1054Lfs*19|1|0.44|ENSG00000197816|chr9:97354591-97354591|T/-|frameshift_variant;REV__ENSG00000197816|ENST00000529487|CCDC180;REV__nc|ENSG00000197816|Q9P1Z9|CCDC180	26.79610172149135	0.7524337208463756	1				NaN	NaN	0	NaN	3581	3652	7231
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7246	24.512	NaN	4989.1	30	0	1894.6	0.215	+			19846	KEEHEVAVL	9	66	527.2824499880476	1052.550347042895	2	527.28271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEEHEVAVL_	ENSG00000142089|ENST00000399808|IFITM3;ENSG00000185885|ENST00000408968|IFITM1;IFITM1|p.S16Afs*9|1|0.39|ENSG00000185885|chr11:314210-314210|C/-|frameshift_variant	64.20726635412375	0.17854274437659667	1				NaN	NaN	0	NaN	3589	3655	7245
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7247	24.516	NaN	1036.8	30	0	299.87	0.106			+	38952	SSQRYLSI	8	43	477.2553405761719	NaN	0	477.2553405761719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSQRYLSI_	REV__ENST00000501122.2_1_11:65197707-65198040:+|nuORF	44.116797842482775	1.7418937515398478	1				NaN	NaN	0	NaN	3590	3655	7245
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7248	24.518	NaN	1246.6	30	0	195.93	0.106			+	26804	LVSLDRGPR	9	38	506.7967016941836	1011.5788504551672	2	506.79632568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LVSLDRGPR_	REV__ENST00000488457.1_1_2:25600201-25602432:-|nuORF	23.04248740728303	0.5879033540491928	1				NaN	NaN	0	NaN	3591	3655	7245
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7249	24.52	NaN	903.22	30	0	113.81	0.034			+	46539	VFDQKEQA	8	47	482.7399775409451	963.4654021486903	2	483.2377014160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VFDQKEQA_	REV__ENSG00000160752|ENST00000368356|FDPS;REV__ENST00000461507.5_1_1:155279855-155288124:+|nuORF;REV__ENST00000470171.5_1_1:155279855-155288545:+|nuORF;REV__ENST00000487002.1_1_1:155279855-155282231:+|nuORF;REV__nc|ENSG00000160752|P14324-2|FDPS	42.396135135203025	0.6414440140393314	1				NaN	NaN	0	NaN	3592	3655	7245
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7260	24.546	NaN	17033	30	0	5208.3	0.215	+			29132	NVADLHEKY	9	55	363.5171074441533	1087.5294929326599	3	363.5171203613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NVADLHEKY_	ENSG00000100804|ENST00000361611|PSMB5;ENST00000493471.2_1_14:23495300-23497005:-|nuORF;nc|ENSG00000100804|P28074-3|PSMB5	24.519189625965996	0.574102787014149	1				NaN	NaN	0	NaN	3600	3658	7259
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7261	24.549	NaN	2244.1	30	0	287.13	0.106	+			41553	SVQEGIKFK	9	60	518.2956196732586	1034.576686413317	2	518.2953491210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVQEGIKFK_	ENSG00000128059|ENST00000264220|PPAT;ENST00000425339.2_1_4:57261520-57265668:-|nuORF	82.7504851949679	0.08565546331141553	1				NaN	NaN	0	NaN	3601	3658	7259
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7262	24.551	NaN	3190.6	30	0	680.83	0.106	+			42547	TASAVVQHM	9	54	472.2367078028695	942.458862672539	2	472.23663330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TASAVVQHM_	ENSG00000115524|ENST00000335508|SF3B1	116.90359126533652	0.02307425081617795	1				NaN	NaN	0	NaN	3602	3658	7259
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7263	24.553	NaN	1421.5	30	0	341.6	0.106	+			50958	YIGSNHSSL	9	44	489.23787634540776	976.4611997576155	2	489.2379455566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YIGSNHSSL_	ENSG00000154639|ENST00000284878|CXADR;nc|ENSG00000154639|P78310-2|CXADR;nc|ENSG00000154639|P78310-6|CXADR;nc|ENSG00000154639|P78310-7|CXADR	37.81151784470057	0.4459294069877048	1				NaN	NaN	0	NaN	3603	3658	7259
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7264	24.555	NaN	2740.2	30	0	362.53	0.106	+			39655	STIFHVQQR	9	59	558.3012453952656	1114.587937857331	2	558.302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STIFHVQQR_	ENSG00000176920|ENST00000425340|FUT2	88.17693792209575	0.07000514020414955	1				NaN	NaN	0	NaN	3604	3658	7259
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7265	24.557	NaN	1974.1	30	0	1036	0.106			+	46733	VGPPRSGSL	9	46	435.24553872064575	868.4765245080915	2	435.2454528808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VGPPRSGSL_	REV__ENSG00000119574|ENST00000594051|ZBTB45	40.77816245573522	0.41113185337114944	1				NaN	NaN	0	NaN	3605	3658	7259
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7266	24.558	NaN	1156.3	30	0	133.05	0.034			+	31929	QQPPPTASP	9	41	461.73497050858657	NaN	0	461.7351989746094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QQPPPTASP_	REV__ENSG00000166889|ENST00000300146|PATL1;REV__ENST00000597336.1_1_19:40530250-40531035:-|nuORF;REV__nc|ENSG00000166889|Q86TB9-2|PATL1;REV__nc|ENSG00000166889|Q86TB9-4|PATL1	27.882242232435846	0.3367954786602879	1				NaN	NaN	0	NaN	3606	3658	7259
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7277	24.584	NaN	8756.2	30	0	1365	0.214	+			29133	NVADLHEKY	9	76	544.7719974631067	1087.5294419930133	2	544.7725830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NVADLHEKY_	ENSG00000100804|ENST00000361611|PSMB5;ENST00000493471.2_1_14:23495300-23497005:-|nuORF;nc|ENSG00000100804|P28074-3|PSMB5	117.5257442709337	0.022697614825424036	1				NaN	NaN	0	NaN	3614	3661	7276
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7278	24.587	NaN	9636.6	30	0	748.08	0.106	+			17664	IEKKYDEEL	9	77	583.8006660716009	1165.5867792100016	2	583.8008422851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IEKKYDEEL_	ENSG00000149591|ENST00000392951|TAGLN;ENST00000533863.1_2_11:117073729-117073927:+|nuORF	139.38205640894643	0.01076996779551382	1				NaN	NaN	0	NaN	3615	3661	7276
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7279	24.589	NaN	2032.8	30	0	275.72	0.106	+			51252	YQQPTAAP	8	52	438.21637004506266	874.4181871569253	2	438.2160339355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YQQPTAAP_	ENSG00000165238|ENST00000427277|WNK2;nc|ENSG00000165238|Q9Y3S1-2|WNK2;nc|ENSG00000165238|Q9Y3S1-3|WNK2;nc|ENSG00000165238|Q9Y3S1-4|WNK2;nc|ENSG00000165238|Q9Y3S1|WNK2;WNK2|p.S1424Pfs*5|1|0.34|ENSG00000165238|chr9:93288908-93288908|C/-|frameshift_variant;WNK2|p.T1980Lfs*12|2|0.16|ENSG00000165238|chr9:93297965-93297965|C/-|frameshift_variant	33.51558372728122	0.7005509609380386	1				NaN	NaN	0	NaN	3616	3661	7276
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7280	24.591	NaN	3768.1	30	0	398.7	0.106	+			40744	SVDEWIKR	8	68	516.7788105436396	1031.543068154079	2	516.7789916992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVDEWIKR_	tr|U7SN90|U7SN90_FUSNUKnr4/Smi1-likedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01753PE=4SV=1	65.80317337860623	0.44433089765398776	1				NaN	NaN	0	NaN	3617	3661	7276
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7281	24.593	NaN	3699.7	30	0	476.95	0.106	+			38911	SSPPSPSVSSE	11	54	530.7438602051544	1059.4731674771087	2	530.7444458007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSPPSPSVSSE_	ENSG00000125089|ENST00000245105|SH3TC1;ENST00000515682.5_1_4:8207046-8242679:+|nuORF	58.22992032128504	0.3392555181951113	1				NaN	NaN	0	NaN	3618	3661	7276
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7282	24.594	NaN	1581.1	30	0	137.04	0.106			+	20609	KGDADRVPDSE	11	48	594.7803587794822	1187.5461646257643	2	594.7796630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KGDADRVPDSE_	REV__ENSG00000133710|ENST00000256084|SPINK5;REV__nc|ENSG00000133710|Q9NQ38-2|SPINK5;REV__nc|ENSG00000133710|Q9NQ38-3|SPINK5;REV__SPINK5|p.P1060Qfs*5|1|0.11|ENSG00000133710|chr5:148133879-148133880|-/AGGA|frameshift_variant	26.063383197487333	0.7164075632144343	1				NaN	NaN	0	NaN	3619	3661	7276
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7283	24.596	NaN	1583.2	30	0	162.11	0.034	+			43362	TGDVPHTSV	9	38	456.7246231432841	911.4346933533682	2	456.7248840332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TGDVPHTSV_	ENSG00000138592|ENST00000307179|USP8;nc|ENSG00000138592|P40818-2|USP8;USP8|p.K997Rfs*2|1|0.11|ENSG00000138592|chr15:50497178-50497178|A/-|frameshift_variant	45.9519527083369	0.35044536499095585	1				NaN	NaN	0	NaN	3620	3661	7276
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7295	24.622	NaN	3356	30	0	681.26	0.214	+			11402	FLPPMAAAPLA	11	63	549.8042665178863	1097.5939801025725	2	549.8050537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FLPPMAAAPLA_	ENST00000266546.10_1_12:7310842-7311004:+|nuORF	31.954861631926434	0.6546107591430316	1				NaN	NaN	0	NaN	3629	3664	7294
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7296	24.625	NaN	3209.9	30	0	1176.2	0.106				-1	LEMQILCFL	9	42	389.5362935673071	1165.5870513021214	3	389.5362243652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LEMQILC(Carbamidomethyl (C))FL_	ENST00000419106.5_3_19:54544108-54544201:-|nuORF	32.81241826257853	0.4965981579233955	1				NaN	NaN	0	NaN	3630	3664	7294
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7297	24.627	NaN	7634.1	30	0	1956.7	0.106	+			43633	TIPYPIFIW	9	59	383.8826541340443	1148.6261330023328	3	383.8824157714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TIPYPIFIW_	SLC19A3|p.S26Lfs*19|1|0.25|ENSG00000135917|chr2:227702244-227702245|-/A|frameshift_variant	25.57405402267927	0.5642445186134241	1				NaN	NaN	0	NaN	3631	3664	7294
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7298	24.629	NaN	3596	30	0	485.37	0.106	+			41632	SVQSDQGYISR	11	67	620.3016732477872	1238.5887935623743	2	620.3020629882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVQSDQGYISR_	ENSG00000177663|ENST00000319363|IL17RA;nc|ENSG00000177663|Q96F46-2|IL17RA	113.67052763333328	0.032425238213486376	1				NaN	NaN	0	NaN	3632	3664	7294
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7299	24.631	NaN	2301.5	30	0	309.65	0.106			+	1239	AERLETLK	8	59	480.2792557607113	958.5439585882226	2	480.279541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AERLETLK_	REV__ENSG00000149488|ENST00000358864|TMC2;REV__nc|ENSG00000149488|Q8TDI7-3|TMC2;REV__TMC2|p.P719Tfs*4|1|0.36|ENSG00000149488|chr20:2617281-2617282|-/C|frameshift_variant	52.936696900407355	0.5717071646657654	1				NaN	NaN	0	NaN	3633	3664	7294
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7300	24.633	NaN	1112.9	30	0	150.39	0.106	+			48782	VTYNGSNLP	9	43	482.7399775409451	963.4654021486903	2	482.7404479980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTYNGSNLP_	ADCY10|p.A439V|1|0.27|ENSG00000143199|chr1:167878536-167878536|G/A|missense_variant;ADCY10|p.N1597Tfs*4|1|0.07|ENSG00000143199|chr1:167809721-167809721|T/-|frameshift_variant;ADCY10|p.N743Tfs*33|1|0.32|ENSG00000143199|chr1:167854433-167854433|T/-|frameshift_variant;ADCY10|p.P1022Sfs*2|1|0.28|ENSG00000143199|chr1:167837262-167837263|-/A|frameshift_variant;ADCY10|p.W654*|1|0.29|ENSG00000143199|chr1:167856362-167856374|CTCCATAAATCTC/-|frameshift_variant;ENSG00000143199|ENST00000367851|ADCY10;nc|ENSG00000143199|Q96PN6-2|ADCY10;nc|ENSG00000143199|Q96PN6-4|ADCY10	40.5726180659479	0.4135428067754104	1				NaN	NaN	0	NaN	3634	3664	7294
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7301	24.634	NaN	2246	30	0	281.67	0.038			+	-1	LCMGRAVLKR	10	61	623.348905363894	1244.683257794588	2	623.3491821289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))LC(Carbamidomethyl (C))MGRAVLKR_	REV__ENST00000338946.10_1_X:54040912-54040951:-|nuORF	47.657333605630114	0.47858658696240314	1				NaN	NaN	0	NaN	3635	3664	7294
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7311	24.658	NaN	12644	30	0	1202.2	0.214	+			23594	LANGQTKVL	9	67	472.28211122277514	942.5496695123503	2	472.2818603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LANGQTKVL_	ENSG00000265972|ENST00000582401|TXNIP;ENST00000488537.1_1_1:145440216-145440639:+|nuORF;nc|ENSG00000265972|Q9H3M7-2|TXNIP	120.8684288430529	0.02067403653475984	1				NaN	NaN	0	NaN	3642	3667	7310
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7312	24.662	NaN	4412.1	30	0	775.76	0.106	+			18314	IPTKQTQTF	9	69	532.2929748027577	1062.5713966723154	2	532.2929077148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IPTKQTQTF_	ENSG00000109971|ENST00000534624|HSPA8;ENSG00000126803|ENST00000247207|HSPA2;ENSG00000173110|ENST00000309758|HSPA6;ENST00000397642.3_1_1:247394123-247394771:+|nuORF;ENST00000425843.1_1_X:120337248-120337797:-|nuORF;ENST00000445535.1_1_1:161576981-161578004:+|nuORF;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;ENST00000552265.2_1_12:111822376-111823062:+|nuORF;HSPA6|p.D632Gfs*9|1|0.12|ENSG00000173110|chr1:161526547-161526548|-/G|frameshift_variant;HSPA8|p.K569Dfs*6|1|0.3|ENSG00000109971|chr11:123058302-123058303|TC/-|frameshift_variant;nc|ENSG00000109971|P11142-2|HSPA8	96.0336014099291	0.047854655524928534	1				NaN	NaN	0	NaN	3643	3667	7310
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7313	24.663	NaN	3925.9	30	0	1027.1	0.106	+			7871	DRILCDVPCSG	11	66	617.7807531872473	1233.5469534412946	2	617.781005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_DRILCDVPC(Carbamidomethyl (C))SG_	ENSG00000037474|ENST00000264670|NSUN2;nc|ENSG00000037474|Q08J23-2|NSUN2;nc|ENSG00000037474|Q08J23-3|NSUN2;NSUN2|p.F423Lfs*6|1|0.21|ENSG00000037474|chr5:6609880-6609880|A/-|frameshift_variant;NSUN2|p.S339Vfs*17|1|0.16|ENSG00000037474|chr5:6616733-6616733|T/-|frameshift_variant;NSUN2|p.Y537Mfs*10|1|0.1|ENSG00000037474|chr5:6605401-6605401|A/-|frameshift_variant	69.6276240434122	0.23884409287757344	1				NaN	NaN	0	NaN	3644	3667	7310
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7314	24.665	NaN	1460.6	30	0	159.09	0.106			+	10410	EVGDGEGLAI	10	48	480.2373152185651	958.4600775039302	2	480.2370910644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EVGDGEGLAI_	REV__ENST00000594286.5_1_19:53625810-53636169:-|nuORF	49.44154591367651	0.46214596422418036	1				NaN	NaN	0	NaN	3645	3667	7310
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7315	24.667	NaN	1771.2	30	0	303.72	0.106	+			26457	LTIDYVNRR	9	50	575.320402505819	1148.6262520784378	2	575.3204956054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LTIDYVNRR_	ENSG00000168702|ENST00000389484|LRP1B;LRP1B|p.C3762Lfs*2|1|0.32|ENSG00000168702|chr2:140358089-140358090|-/A|frameshift_variant;LRP1B|p.G4130Mfs*20|1|0.06|ENSG00000168702|chr2:140324019-140324020|-/AT|frameshift_variant;LRP1B|p.H4368Tfs*4|1|0.47|ENSG00000168702|chr2:140274465-140274465|C/-|frameshift_variant;LRP1B|p.N3434Tfs*84|1|0.47|ENSG00000168702|chr2:140442617-140442617|T/-|frameshift_variant;LRP1B|p.N4135Mfs*14|1|0.13|ENSG00000168702|chr2:140324003-140324003|T/-|frameshift_variant;LRP1B|p.R3957Kfs*11|2|0.15|ENSG00000168702|chr2:140350819-140350820|-/T|frameshift_variant	40.05817265558897	0.419577045485086	1				NaN	NaN	0	NaN	3646	3667	7310
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7316	24.669	NaN	1642.8	30	0	210.79	0.106	+			32213	QTAIAEAEQR	10	48	558.7857049494304	1115.5568569656607	2	558.7870483398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QTAIAEAEQR_	CON__Q01546;CON__Q5XKE5;ENSG00000185069|ENST00000332411|KRT76;ENSG00000185640|ENST00000330553|KRT79;ENST00000546453.1_1_12:53215658-53224087:-|nuORF;KRT79|p.E398Gfs*31|1|0.35|ENSG00000185640|chr12:52823190-52823191|-/C|frameshift_variant	52.936696900407355	0.4300801048568001	1				NaN	NaN	0	NaN	3647	3667	7310
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7317	24.671	NaN	1058.4	30	0	113.29	0.035	+			27487	MLWTWAIV	8	44	510.2728825537232	1018.5312121742464	2	510.27215576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MLWTWAIV_	ENST00000592782.5_1_17:43171142-43173565:+|nuORF	26.79610172149135	0.7524337208463756	1				NaN	NaN	0	NaN	3648	3667	7310
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7324	24.689	NaN	5754.9	30	0	2352.3	0.214			+	-1	KHQPCLLVP	9	53	364.54050791125616	1090.5996943339685	3	364.54119873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_KHQPC(Carbamidomethyl (C))LLVP_	REV__ENST00000329082.11_1_15:93586813-93587449:-|nuORF	34.172542307311794	0.4838870758800184	1				NaN	NaN	0	NaN	3652	3670	7323
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7325	24.692	NaN	2048	30	0	595.57	0.106	+			15119	GTQTVFPSK	9	53	482.75823006790546	963.5019072026109	2	482.75848388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTQTVFPSK_	ENSG00000156463|ENST00000359120|SH3RF2;ENST00000511705.1_1_5:145435703-145442261:+|nuORF;nc|ENSG00000156463|Q8TEC5-2|SH3RF2;nc|ENSG00000156463|Q8TEC5-3|SH3RF2	54.722347961057174	0.257609425301511	1				NaN	NaN	0	NaN	3653	3670	7323
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7326	24.694	NaN	1157.3	30	0	104.92	0.106			+	38374	SRSPPPPA	8	51	404.71948978583464	NaN	0	404.7193908691406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SRSPPPPA_	REV__ENSG00000226490|ENST00000643770|C8orf90	25.450171626174864	1.7418937515398478	1				NaN	NaN	0	NaN	3654	3670	7323
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7327	24.696	NaN	1639.5	30	0	285.25	0.106			+	35122	SAGVQQKGKPQ	11	56	564.3133119160286	1126.6120708988572	2	564.3138427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SAGVQQKGKPQ_	REV__ENST00000464461.1_1_7:150413703-150416231:+|nuORF	29.170058357718403	0.683821074385409	1				NaN	NaN	0	NaN	3655	3670	7323
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7328	24.698	NaN	806.98	30	0	80.047	0.033	+			43422	TGKLFAVK	8	42	432.2705637379505	NaN	0	432.2704772949219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TGKLFAVK_	ENSG00000183049|ENST00000619168|CAMK1D;nc|ENSG00000183049|Q8IU85-2|CAMK1D	37.15910966729921	1.7418937515398478	1				NaN	NaN	0	NaN	3656	3670	7323
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7339	24.723	NaN	1944.8	30	0	313.94	0.214			+	39778	STKNCARGR	9	56	525.2661380562365	1048.517723179273	2	525.2674560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_STKNC(Carbamidomethyl (C))ARGR_	REV__ENSG00000169884|ENST00000301061|WNT10B	49.44154591367651	0.3095138337212152	1				NaN	NaN	0	NaN	3664	3673	7338
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7340	24.727	NaN	1803.9	30	0	506.94	0.106	+			14568	GTFQTTMTK	9	53	507.7495272542471	NaN	0	507.7496032714844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTFQTTMTK_	ENSG00000085719|ENST00000517490|CPNE3;ENST00000517862.1_1_8:87552529-87557099:+|nuORF	90.60085204095205	0.040385177724871185	1				NaN	NaN	0	NaN	3665	3673	7338
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7341	24.729	NaN	1508.3	30	0	327.33	0.106	+			11406	FLPSVRKNM	9	55	546.3061727074988	1090.5977924817976	2	546.3097534179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FLPSVRKNM_	ENST00000512760.5_1_4:79851330-79860302:-|nuORF	27.882242232435846	0.5426732730940306	1				NaN	NaN	0	NaN	3666	3673	7338
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7342	24.73	NaN	1291.4	30	0	132.53	0.106	+			12715	GEKTAGINV	9	49	444.74301486682356	NaN	0	444.74273681640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEKTAGINV_	ENSG00000115484|ENST00000394440|CCT4;nc|ENSG00000115484|P50991-2|CCT4	69.6276240434122	0.10825701912424071	1				NaN	NaN	0	NaN	3667	3673	7338
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7343	24.732	NaN	1473.2	30	0	210.66	0.106	+			7060	CTLSFCIYKH	10	48	607.7862734206795	1213.557993908159	2	607.7861938476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_CTLSFCIYKH_	ENSG00000153246|ENST00000283243|PLA2R1	26.69291269510374	0.6618461711292317	1				NaN	NaN	0	NaN	3668	3673	7338
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7344	24.734	NaN	1332.2	30	0	175.93	0.106	+			1824	AIHDNFSI	8	39	458.72969592430286	915.4448389154057	2	458.7294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AIHDNFSI_	ENST00000489113.2_1_3:143222453-143222699:-|nuORF	50.0245360154114	0.5941082100236891	1				NaN	NaN	0	NaN	3669	3673	7338
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7345	24.736	NaN	1293	30	0	123.92	0.034	+			51347	YSTGHSPAL	9	49	466.72733607748125	931.4401192217625	2	466.7265930175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YSTGHSPAL_	ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000126464|Q9ULL5-2|PRR12;PRR12|p.P506Lfs*44|1|0.33|ENSG00000126464|chr19:49599569-49599569|C/-|frameshift_variant;PRR12|p.R352Gfs*50|1|0.13|ENSG00000126464|chr19:49597847-49597847|G/-|frameshift_variant	44.116797842482775	0.37197099687881774	1				NaN	NaN	0	NaN	3670	3673	7338
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7357	24.761	NaN	1931.9	30	0	817.58	0.214				-1	 	0	38	328.70930815925436	655.4040633853087	2	328.7093200683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	3679	3676	7356
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7358	24.765	NaN	2488.9	30	0	616.78	0.106			+	1313	AETEGPGEGI	10	59	480.2194036994887	NaN	0	480.2193603515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AETEGPGEGI_	REV__ENSG00000047578|ENST00000261588|KATNIP	47.657333605630114	0.3204131577145918	1				NaN	NaN	0	NaN	3680	3676	7356
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7359	24.767	NaN	1862.5	30	0	274.06	0.106			+	-1	KIIVINSAQ	9	57	514.310876206467	1026.607199479734	2	514.3109741210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))KIIVINSAQ_	REV__tr|U7SH82|U7SH82_FUSNUColdshock-likeproteinCspEOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02217PE=4SV=1	29.14955571784316	0.5308295550522326	1				NaN	NaN	0	NaN	3681	3676	7356
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7360	24.769	NaN	2258.4	30	0	352.22	0.106	+			14055	GSIGGTFAK	9	46	419.22672081917943	836.4388887051589	2	419.2266540527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GSIGGTFAK_	ENSG00000137992|ENST00000370132|DBT	98.62937762414208	0.04060045538121712	1				NaN	NaN	0	NaN	3682	3676	7356
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7361	24.77	NaN	2213.3	30	0	275.8	0.106	+			13867	GQYGNPLNK	9	54	495.75379601775336	989.4930391023067	2	495.75347900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GQYGNPLNK_	ADAM10|p.P631Lfs*17|1|0.5|ENSG00000137845|chr15:58610430-58610430|G/-|frameshift_variant;ENSG00000137845|ENST00000260408|ADAM10;ENST00000558733.5_1_15:58947546-59041769:-|nuORF;ENST00000560608.5_1_15:58971480-59041769:-|nuORF;ENST00000561149.1_1_15:58974496-59041769:-|nuORF	60.97194046774394	0.20551255781574032	1				NaN	NaN	0	NaN	3683	3676	7356
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7362	24.772	NaN	1688.6	30	0	256.36	0.106	+			12179	GAMGYGYEK	9	39	488.2151563372726	974.4157597413453	2	488.2152404785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GAMGYGYEK_	ENSG00000175832|ENST00000319349|ETV4;nc|ENSG00000175832|P43268-2|ETV4;nc|ENSG00000175832|P43268-3|ETV4	64.20726635412375	0.17854274437659667	1				NaN	NaN	0	NaN	3684	3676	7356
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7363	24.774	NaN	3444.7	30	0	1058.1	0.036			+	36562	SFQPSLKLL	9	51	344.87295606092346	1031.5970387829705	3	344.8727722167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SFQPSLKLL_	REV__ENST00000485155.1_1_2:63816129-63821744:+|nuORF;REV__ENST00000485781.5_1_2:63816129-63824744:+|nuORF	30.317721548370564	0.5199124245378496	1				NaN	NaN	0	NaN	3685	3676	7356
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7376	24.801	NaN	2035.8	30	0	346.26	0.214	+			11317	FLAEAARS	8	48	432.7323263631173	863.4500997930346	2	432.7324523925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FLAEAARS_	ENSG00000126107|ENST00000372172|HECTD3;HECTD3|p.P212Rfs*11|1|0.16|ENSG00000126107|chr1:45010110-45010110|G/-|frameshift_variant;HECTD3|p.V564Cfs*41|1|0.18|ENSG00000126107|chr1:45006728-45006728|G/-|frameshift_variant	42.396135135203025	0.6414440140393314	1				NaN	NaN	0	NaN	3695	3679	7375
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7377	24.805	NaN	4282.7	30	0	638.87	0.106	+			31537	QLLHNDEY	8	63	516.2432676028627	1030.4719822725253	2	516.243408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QLLHNDEY_	ENSG00000168883|ENST00000323701|USP39;ENST00000459775.5_1_2:85848673-85875928:+|nuORF;ENST00000493829.5_1_2:85843459-85872221:+|nuORF;nc|ENSG00000168883|Q53GS9-2|USP39;nc|ENSG00000168883|Q53GS9-3|USP39	68.78682469695295	0.41700713582915416	1				NaN	NaN	0	NaN	3696	3679	7375
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7378	24.807	NaN	2240.5	30	0	372.9	0.106			+	14742	GTKEKKIGF	9	37	336.5342029318414	1006.5807793957242	3	336.53436279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTKEKKIGF_	REV__ENSG00000110844|ENST00000548825|PRPF40B;REV__nc|ENSG00000110844|Q6NWY9-2|PRPF40B;REV__nc|ENSG00000110844|Q6NWY9-3|PRPF40B;REV__nc|ENSG00000110844|Q6NWY9|PRPF40B	23.04248740728303	0.5879033540491928	1				NaN	NaN	0	NaN	3697	3679	7375
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7379	24.809	NaN	2759.1	30	0	332.78	0.106	+			40172	STQSLSLQR	9	63	510.27837126560115	1018.5421895980023	2	510.27899169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STQSLSLQR_	ENSG00000187479|ENST00000617612|C11orf96;nc|nan|Q7Z7L8|C11orf96	51.52775601994872	0.28504342437107444	1				NaN	NaN	0	NaN	3698	3679	7375
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7380	24.81	NaN	1172.8	30	0	425.14	0.106			+	44229	TRRNSLSH	8	44	485.7606201171875	NaN	0	485.7606201171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TRRNSLSH_	REV__ENSG00000147873|ENST00000610521|IFNA5	21.9598887501803	1.7418937515398478	1				NaN	NaN	0	NaN	3699	3679	7375
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7381	24.812	NaN	929	30	0	145.22	0.106			+	-1	CTGPACKR	8	27	446.7081928480604	NaN	0	446.7091369628906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_CTGPAC(Carbamidomethyl (C))KR_	REV__ENSG00000166147|ENST00000316623|FBN1;REV__ENST00000560820.1_1_15:48729911-48737600:-|nuORF	19.359975847455235	1.7418937515398478	1				NaN	NaN	0	NaN	3700	3679	7375
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7382	24.814	NaN	1026	30	0	59.654	0.044				-1	VYKNWWYWYCS	11	37	827.859375	NaN	0	827.859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_VYKNWWYWYC(Carbamidomethyl (C))S_	ENST00000359165.5_1_12:19609713-19609968:-|nuORF	2.718429308559148	0.456735970842152	1				NaN	NaN	0	NaN	3701	3679	7375
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7389	24.832	NaN	6734.9	30	0	2850.1	0.214				-1	 	0	43	322.19360069332464	642.3726484534493	2	322.1936340332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	3705	3682	7388
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7390	24.836	NaN	4606.2	30	0	712.93	0.106	+			14853	GTLMWHQMK	9	57	574.2724597152921	1146.5303664973842	2	574.2730102539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_GTLMWHQM(Oxidation (M))K_	ENST00000346169.6_1_3:184032401-184033585:+|nuORF;ENST00000352767.7_2_3:184032446-184033585:+|nuORF	96.19043198914106	0.047412499214244314	1				NaN	NaN	0	NaN	3706	3682	7388
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7391	24.838	NaN	2195	30	0	311.94	0.106	+			5105	ATSPIIIHR	9	55	504.3034122028237	1006.5922714724475	2	504.3028259277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATSPIIIHR_	ENSG00000135336|ENST00000392844|ORC3;nc|ENSG00000135336|Q9UBD5-2|ORC3;nc|ENSG00000135336|Q9UBD5-3|ORC3	56.72105179125745	0.24094814563026265	1				NaN	NaN	0	NaN	3707	3682	7388
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7392	24.839	NaN	1509	30	0	329.14	0.106	+			47639	VSASLASASL	10	45	453.2505748881812	904.4865968431624	2	453.25006103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSASLASASL_	ENSG00000185085|ENST00000330574|INTS5;INTS5|p.A801Hfs*4|1|0.19|ENSG00000185085|chr11:62647679-62647679|C/-|frameshift_variant	76.7741389293348	0.22197596950688292	1				NaN	NaN	0	NaN	3708	3682	7388
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7393	24.841	NaN	2286	30	0	155.36	0.106				-1	LKRMWYEDPFH	11	69	769.3654922875845	1536.716431641969	2	769.8666381835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_LKRM(Oxidation (M))WYEDPFH_	ENST00000477892.5_1_3:122128703-122128778:+|nuORF	29.170058357718403	0.683821074385409	1				NaN	NaN	0	NaN	3709	3682	7388
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7394	24.843	NaN	3869.6	30	0	658.96	0.106	+			15638	GVLGSSKVLAK	11	69	529.8321331992549	1057.6497134653098	2	529.8326416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GVLGSSKVLAK_	ENSG00000160216|ENST00000291572|AGPAT3;nc|ENSG00000160216|Q9NRZ7-2|AGPAT3;nc|ENSG00000160216|Q9NRZ7-3|AGPAT3	72.28901530423826	0.21665691776497367	1				NaN	NaN	0	NaN	3710	3682	7388
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7395	24.845	NaN	1646	30	0	228.04	0.036			+	50337	WVCQILNAAP	10	49	557.789935338073	1113.5653177429458	2	557.7913818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_WVCQILNAAP_	REV__ENSG00000185760|ENST00000370398|KCNQ5;REV__nc|ENSG00000185760|Q9NR82-2|KCNQ5;REV__nc|ENSG00000185760|Q9NR82-3|KCNQ5;REV__nc|ENSG00000185760|Q9NR82-4|KCNQ5;REV__nc|ENSG00000185760|Q9NR82-5|KCNQ5;REV__nc|ENSG00000185760|Q9NR82-6|KCNQ5;REV__nc|ENSG00000185760|Q9NR82-7|KCNQ5	32.81241826257853	0.6118718159329168	1				NaN	NaN	0	NaN	3711	3682	7388
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7403	24.863	NaN	5833.7	30	0	459.65	0.214	+			35890	SEEVVSREV	9	66	517.2615805428552	1032.5086081525103	2	517.2617797851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEEVVSREV_	ENSG00000160789|ENST00000368300|LMNA;nc|ENSG00000160789|P02545-2|LMNA;nc|ENSG00000160789|P02545-3|LMNA;nc|ENSG00000160789|P02545-6|LMNA	126.24258497203832	0.01742065577488747	1				NaN	NaN	0	NaN	3716	3685	7402
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7404	24.867	NaN	1383.5	30	0	152.48	0.106	+			25854	LSEVIVKNL	9	39	338.87770157797195	NaN	0	338.8777160644531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSEVIVKNL_	ENSG00000163781|ENST00000260810|TOPBP1;ENST00000506779.1_1_3:133347204-133347562:-|nuORF;TOPBP1|p.K1266Nfs*10|1|0.13|ENSG00000163781|chr3:133616887-133616887|T/-|frameshift_variant;TOPBP1|p.R1378Sfs*18|1|0.04|ENSG00000163781|chr3:133611043-133611044|-/AAAAGAGAATGTG|frameshift_variant;TOPBP1|p.R964Efs*12|1|0.19|ENSG00000163781|chr3:133624090-133624090|T/-|frameshift_variant;TOPBP1|p.T861M|1|0.29|ENSG00000163781|chr3:133628672-133628672|G/A|missense_variant	24.20275056022122	0.35506675290109213	1				NaN	NaN	0	NaN	3717	3685	7402
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7405	24.869	NaN	1041.7	30	0	155.95	0.106				-1	MAVQCAVAK	9	40	489.2485046386719	NaN	0	489.2485046386719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_MAVQC(Carbamidomethyl (C))AVAK_	HEATR5B|p.R194Q|1|0.12|ENSG00000008869|chr2:37075501-37075501|C/T|missense_variant	31.954861631926434	0.3162336699109506	1				NaN	NaN	0	NaN	3718	3685	7402
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7406	24.87	NaN	931.58	30	0	88.474	0.106				-1	 	0	46	346.68422760153555	691.3539022698711	2	346.6841735839844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	3719	3685	7402
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7407	24.872	NaN	1486.9	30	0	213.96	0.106			+	18548	ISMQHFKLQ	9	54	566.3033724912268	1130.5921920492535	2	566.3043212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ISMQHFKLQ_	REV__ENST00000465952.5_1_13:31192116-31195964:+|nuORF	45.97224482568171	0.3502073465782774	1				NaN	NaN	0	NaN	3720	3685	7402
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7408	24.874	NaN	1360.4	30	0	320.66	0.106	+			22078	KSLENILTL	9	45	344.2093505859375	NaN	0	344.2093505859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KSLENILTL_	ENSG00000134452|ENST00000362091|FBH1;ENST00000470353.1_1_10:5967388-5971349:+|nuORF;ENST00000479433.5_1_10:5967388-5970349:+|nuORF;nc|ENSG00000134452|Q8NFZ0-2|FBH1	30.317721548370564	0.32449924987115025	1				NaN	NaN	0	NaN	3721	3685	7402
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7409	24.876	NaN	1184.8	30	0	155.72	0.036			+	18297	IPPGAPGEQPS	11	44	525.2661380562365	1048.517723179273	2	525.26708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IPPGAPGEQPS_	REV__ENST00000336314.8_2_5:154193974-154194505:+|nuORF	36.446750945000026	0.6065623449959539	1				NaN	NaN	0	NaN	3722	3685	7402
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7416	24.894	NaN	8458	30	0	5722.9	0.214	+			46729	VGPPGRSSL	9	47	435.24553872064575	868.4765245080915	2	435.245361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VGPPGRSSL_	ENSG00000102900|ENST00000308159|NUP93;nc|ENSG00000102900|Q8N1F7-2|NUP93;NUP93|p.F699Lfs*19|1|0.34|ENSG00000102900|chr16:56839025-56839025|T/-|frameshift_variant	45.02220120713402	0.3613509778819777	1				NaN	NaN	0	NaN	3726	3688	7415
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7417	24.897	NaN	5549.1	30	0	809.29	0.106			+	25285	LNSSHAFI	8	58	444.73218901397394	887.4498250947479	2	444.7319641113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LNSSHAFI_	REV__ENSG00000006194|ENST00000219069|ZNF263	52.29916861842294	0.578018602984656	1				NaN	NaN	0	NaN	3727	3688	7415
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7418	24.899	NaN	1558.8	30	0	198.78	0.106				-1	 	0	46	384.7720625920663	767.5295722509326	2	384.7720642089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	3728	3688	7415
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7419	24.901	NaN	1912	30	0	284.97	0.036	+			7746	DNCLALRLQ	9	61	551.7899875562609	NaN	0	551.7904663085938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_DNC(Carbamidomethyl (C))LALRLQ_	nc|ENSG00000188487|Q1MX18-3|INSC	71.87747018426188	0.0992163553043454	1				NaN	NaN	0	NaN	3729	3688	7415
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7431	24.927	NaN	1889.7	30	0	221.2	0.214			+	35750	SDTQIYKR	8	53	505.76711399964546	1009.5196750660909	2	505.7674865722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SDTQIYKR_	REV__ENSG00000183386|ENST00000373016|FHL3;REV__ENST00000483132.1_1_1:38464619-38465084:-|nuORF	38.80614096846853	0.6637206697844082	1				NaN	NaN	0	NaN	3738	3691	7430
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7432	24.93	NaN	3750.1	30	0	338.45	0.106			+	9741	ENDMLGLKR	9	64	538.2800270129284	1074.5455010926567	2	538.2802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ENDMLGLKR_	REV__ENSG00000120889|ENST00000276431|TNFRSF10B;REV__ENST00000523504.5_1_8:22880186-22926453:-|nuORF;REV__ENST00000523752.5_1_8:22880186-22885396:-|nuORF;REV__nc|ENSG00000120889|O14763-2|TNFRSF10B	47.657333605630114	0.33044192980041115	1				NaN	NaN	0	NaN	3739	3691	7430
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7433	24.932	NaN	1960.8	30	0	246.02	0.106	+			44683	TTIEEDKSVLK	11	52	631.8459501821858	NaN	0	631.8453369140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TTIEEDKSVLK_	ENSG00000183576|ENST00000331768|SETD3	57.148748479083515	0.26023586196586435	1				NaN	NaN	0	NaN	3740	3691	7430
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7434	24.934	NaN	1577.6	30	0	611.57	0.106			+	48135	VSVRNPTLS	9	39	486.7772078285351	971.5398627238702	2	486.77685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSVRNPTLS_	REV__ENST00000517490.5_1_8:87570674-87570737:+|nuORF	21.9598887501803	0.5980208138527809	1				NaN	NaN	0	NaN	3741	3691	7430
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7435	24.936	NaN	1038.2	30	0	185.14	0.035	+			27794	MSAGVAIGSEK	11	52	525.2661380562365	1048.517723179273	2	525.2611694335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MSAGVAIGSEK_	tr|U7SU48|U7SU48_FUSNUTrimericautotransporteradhesinYadA-likeC-terminalmembraneanchordomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01019PE=3SV=1	47.95952297671804	0.44903247279694136	1				NaN	NaN	0	NaN	3742	3691	7430
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7447	24.962	NaN	5362.6	30	0	1079.7	0.214	+			2948	ASEAIKGAVVG	11	60	501.2849981473987	1000.5554433615974	2	501.28485107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASEAIKGAVVG_	ENSG00000113013|ENST00000297185|HSPA9;ENST00000506477.5_1_5:137906647-137911007:-|nuORF	70.8162118820467	0.22893521292419713	1				NaN	NaN	0	NaN	3751	3694	7446
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7448	24.965	NaN	4495.2	30	0	490.8	0.106	+			28269	NDTQIKLFI	9	50	364.54050791125616	1090.5996943339685	3	364.8731994628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NDTQIKLFI_	CDC45|p.L118F|1|0.33|ENSG00000093009|chr22:19483871-19483871|C/T|missense_variant	25.450171626174864	0.5654022654467333	1				NaN	NaN	0	NaN	3752	3694	7446
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7449	24.967	NaN	2631.1	30	0	273.46	0.106			+	7018	CRYYGADELA	10	56	580.7554606422484	1159.4963683512967	2	580.7559204101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_CRYYGADELA_	REV__ENSG00000115590|ENST00000332549|IL1R2;REV__nc|ENSG00000115590|P27930-2|IL1R2	32.81241826257853	0.6118718159329168	1				NaN	NaN	0	NaN	3753	3694	7446
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7450	24.969	NaN	1833	30	0	313.42	0.035	+			51296	YSCDHNTSL	9	60	520.2115283027764	1038.4085036723527	2	520.2119750976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YSCDHNTSL_	ENSG00000127603|ENST00000564288|MACF1;MACF1|p.A5223Lfs*8|1|0.21|ENSG00000127603|chr1:39388486-39388486|G/-|frameshift_variant;MACF1|p.N4824Kfs*19|1|0.33|ENSG00000127603|chr1:39387292-39387293|-/A|frameshift_variant;MACF1|p.P924Hfs*52|1|0.23|ENSG00000127603|chr1:39303040-39303040|C/-|frameshift_variant;MACF1|p.S2157Ffs*3|1|0.37|ENSG00000127603|chr1:39333036-39333037|-/T|frameshift_variant;MACF1|p.T4896Lfs*29|1|0.27|ENSG00000127603|chr1:39387507-39387507|A/-|frameshift_variant;nc|ENSG00000127603|Q9UPN3-2|MACF1;nc|ENSG00000127603|Q9UPN3-3|MACF1;nc|ENSG00000127603|Q9UPN3-4|MACF1;nc|ENSG00000127603|Q9UPN3|MACF1	51.19269402634007	0.2889735674168909	1				NaN	NaN	0	NaN	3754	3694	7446
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7461	24.993	NaN	7884.5	30	0	993.17	0.214	+			41126	SVITIVKSK	9	58	487.81568695208415	973.6168209709683	2	487.81561279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVITIVKSK_	ENSG00000197063|ENST00000357736|MAFG	127.46168284122857	0.016682644177004526	1				NaN	NaN	0	NaN	3762	3697	7460
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7462	24.996	NaN	2584.2	30	0	313.31	0.106			+	24097	LEKKIVTE	8	63	480.2920217561578	958.5694905791156	2	480.2919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LEKKIVTE_	REV__tr|U7SED7|U7SED7_FUSNUCoproporphyrinogendehydrogenaseHemZOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02333PE=4SV=1	90.77665401227738	0.27511901818546464	1				NaN	NaN	0	NaN	3763	3697	7460
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7463	24.998	NaN	4254.9	30	0	618.43	0.106	+			43180	TETTKFEKL	9	73	548.7978268223262	1095.5811007114523	2	548.7981567382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TETTKFEKL_	CC2D1A|p.G898Vfs*45|1|0.32|ENSG00000132024|chr19:13929638-13929638|G/-|frameshift_variant;ENSG00000132024|ENST00000318003|CC2D1A;ENST00000589138.5_1_19:14029331-14037891:+|nuORF;ENST00000589224.1_1_19:14034393-14038165:+|nuORF;nc|ENSG00000132024|Q6P1N0-2|CC2D1A	76.16968421966216	0.11411088698345859	1				NaN	NaN	0	NaN	3764	3697	7460
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7464	25	NaN	2182.1	30	0	367.95	0.106			+	25589	LQHQQLKA	8	52	483.2794112785526	NaN	0	483.2795715332031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LQHQQLKA_	REV__PDHX|p.R464H|1|0.33|ENSG00000110435|chr11:34995057-34995057|G/A|missense_variant	53.351449002276354	1.7418937515398478	1				NaN	NaN	0	NaN	3765	3697	7460
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7465	25.002	NaN	7353.4	30	0	2256.5	0.106	+			23241	KYIHSANVL	9	57	522.7955333409344	1043.5765137486687	2	522.79638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KYIHSANVL_	ENSG00000069956|ENST00000261845|MAPK6;ENSG00000100030|ENST00000215832|MAPK1;ENSG00000102882|ENST00000263025|MAPK3;ENSG00000141639|ENST00000400384|MAPK4;ENST00000478356.5_2_16:30128576-30134273:-|nuORF;ENST00000483869.1_1_16:30129346-30134419:-|nuORF;MAPK6|p.P206*|1|0.03|ENSG00000069956|chr15:52050053-52050054|CC/-|frameshift_variant;nc|ENSG00000100030|P28482-2|MAPK1;nc|ENSG00000102882|P27361-2|MAPK3;nc|ENSG00000102882|P27361-3|MAPK3	82.7504851949679	0.08565546331141553	1				NaN	NaN	0	NaN	3766	3697	7460
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7466	25.004	NaN	1924.3	30	0	210.26	0.106	+			47377	VPHTNPPEY	9	56	527.2539511730698	1052.4933494129396	2	527.2550048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VPHTNPPEY_	ENSG00000177383|ENST00000317897|MAGEF1	56.72105179125745	0.24094814563026265	1				NaN	NaN	0	NaN	3767	3697	7460
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7467	25.006	NaN	1729.8	30	0	291.48	0.032				-1	 	0	47	394.7655684737263	NaN	0	394.7654724121094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	3768	3697	7460
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7477	25.028	NaN	6604.1	30	0	973.94	0.214	+			18315	IPTKQTQTF	9	70	532.2929748027577	1062.5713966723154	2	532.2933349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IPTKQTQTF_	ENSG00000109971|ENST00000534624|HSPA8;ENSG00000126803|ENST00000247207|HSPA2;ENSG00000173110|ENST00000309758|HSPA6;ENST00000397642.3_1_1:247394123-247394771:+|nuORF;ENST00000425843.1_1_X:120337248-120337797:-|nuORF;ENST00000445535.1_1_1:161576981-161578004:+|nuORF;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;ENST00000552265.2_1_12:111822376-111823062:+|nuORF;HSPA6|p.D632Gfs*9|1|0.12|ENSG00000173110|chr1:161526547-161526548|-/G|frameshift_variant;HSPA8|p.K569Dfs*6|1|0.3|ENSG00000109971|chr11:123058302-123058303|TC/-|frameshift_variant;nc|ENSG00000109971|P11142-2|HSPA8	61.691277971877994	0.19951612995419254	1				NaN	NaN	0	NaN	3775	3700	7476
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7478	25.031	NaN	1941.2	30	0	371.95	0.106			+	11068	FESWAGQQ	8	50	476.7117886432892	951.4090243533784	2	476.7113952636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FESWAGQQ_	REV__nc|ENSG00000182366|P0C7U9|FAM87A	31.954861631926434	0.7126016770032289	1				NaN	NaN	0	NaN	3776	3700	7476
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7479	25.033	NaN	1837.2	30	0	261.08	0.106			+	31229	QGWVAPAKG	9	46	457.2480225639018	912.4814921946037	2	457.2479553222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QGWVAPAKG_	REV__ENSG00000175718|ENST00000424776|RBMXL3;REV__RBMXL3|p.G265Afs*11|1|0.38|ENSG00000175718|chrX:115190234-115190234|G/-|frameshift_variant;REV__RBMXL3|p.G692Afs*282|1|0.46|ENSG00000175718|chrX:115191512-115191512|G/-|frameshift_variant	21.9598887501803	0.5980208138527809	1				NaN	NaN	0	NaN	3777	3700	7476
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7480	25.035	NaN	2870.6	30	0	1668	0.106	+			41127	SVITIVKSK	9	38	325.5460401056152	NaN	0	325.5460510253906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVITIVKSK_	ENSG00000197063|ENST00000357736|MAFG	21.9598887501803	0.3626577482100488	1				NaN	NaN	0	NaN	3778	3700	7476
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7481	25.037	NaN	1313.5	30	0	158.43	0.034	+			44727	TTLNVIRL	8	47	465.2924643830538	928.5703758329076	2	465.29248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TTLNVIRL_	ENSG00000004766|ENST00000305866|VPS50;ENST00000441602.5_1_7:92883193-92979232:+|nuORF;ENST00000471188.5_1_7:92887656-92969983:+|nuORF;nc|ENSG00000004766|Q96JG6-3|VPS50	33.51558372728122	0.7005509609380386	1				NaN	NaN	0	NaN	3779	3700	7476
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7490	25.057	NaN	3153.1	30	0	573.38	0.214			+	47289	VNGHYSVI	8	50	444.73218901397394	887.4498250947479	2	444.7317199707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VNGHYSVI_	REV__ENSG00000181026|ENST00000332810|AEN;REV__ENST00000557787.1_1_15:89164581-89170043:+|nuORF;REV__nc|ENSG00000181026|Q8WTP8-2|AEN	57.81127852772723	0.5234495074909924	1				NaN	NaN	0	NaN	3785	3703	7489
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7491	25.06	NaN	2225	30	0	846.54	0.106			+	27788	MRTSLNIE	8	52	482.2517723326888	962.4889917321776	2	482.2523498535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MRTSLNIE_	REV__ENSG00000162711|ENST00000336119|NLRP3;REV__ENST00000474792.1_1_1:247582090-247588902:+|nuORF;REV__nc|ENSG00000162711|Q96P20-2|NLRP3;REV__nc|ENSG00000162711|Q96P20-3|NLRP3;REV__nc|ENSG00000162711|Q96P20-4|NLRP3;REV__nc|ENSG00000162711|Q96P20-5|NLRP3;REV__nc|ENSG00000162711|Q96P20-6|NLRP3;REV__nc|ENSG00000162711|Q96P20|NLRP3;REV__NLRP3|p.S735Ffs*11|1|0.08|ENSG00000162711|chr1:247429627-247429628|-/T|frameshift_variant	58.22992032128504	0.519305013932957	1				NaN	NaN	0	NaN	3786	3703	7489
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7492	25.062	NaN	2689.6	30	0	1261.6	0.106			+	19029	IWVSATCVMPL	11	44	610.3144770456021	1218.614401158004	2	610.31494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IWVSATCVMPL_	REV__KMT2B|p.R1055Gfs*127|1|0.46|ENSG00000272333|chr19:35723827-35723827|G/-|frameshift_variant	17.833141474888023	0.7869876583333034	1				NaN	NaN	0	NaN	3787	3703	7489
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7493	25.064	NaN	1092.7	30	0	147.36	0.106				-1	LAADMDLHC	9	51	531.2230497663344	1060.4315465994687	2	531.2235107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_LAADM(Oxidation (M))DLHC(Carbamidomethyl (C))_	AMER2|p.S94Afs*8|1|0.33|ENSG00000165566|chr13:25171344-25171344|C/-|frameshift_variant;ENSG00000165566|ENST00000515384|AMER2;nc|ENSG00000165566|Q8N7J2-2|AMER2	38.80614096846853	0.43426287593479557	1				NaN	NaN	0	NaN	3788	3703	7489
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7494	25.066	NaN	1420.4	30	0	262.57	0.106			+	11367	FLHNSGSP	8	30	429.7089210956075	857.403289258015	2	429.7091979980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FLHNSGSP_	REV__ENST00000393459.5_1_10:102791121-102791208:+|nuORF	44.116797842482775	0.6307669463330267	1				NaN	NaN	0	NaN	3789	3703	7489
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7495	25.068	NaN	2087.2	30	0	924.97	0.036			+	-1	MQPITRAVI	9	38	348.86597605377955	NaN	0	348.866455078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_M(Oxidation (M))QPITRAVI_	REV__IPO5|p.Q303R|1|0.15|ENSG00000065150|chr13:97993220-97993220|A/G|missense_variant	20.94693142431847	0.3660861156085067	1				NaN	NaN	0	NaN	3790	3703	7489
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7505	25.091	NaN	11501	30	0	5572.4	0.214	+			18584	ISPSRTEAL	9	63	487.2690427470494	972.5235325608988	2	487.2691955566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ISPSRTEAL_	ENSG00000179344|ENST00000434651|HLA-DQB1;ENSG00000232629|ENST00000437316|HLA-DQB2;ENST00000487676.1_1_6:32629660-32630092:-|nuORF;nc|ENSG00000179344|P01920|HLA-DQB1;nc|ENSG00000232629|P05538-2|HLA-DQB2;nc|ENSG00000232629|P05538|HLA-DQB2	61.691277971877994	0.19951612995419254	1				NaN	NaN	0	NaN	3797	3706	7504
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7506	25.095	NaN	1330	30	0	189.38	0.106	+			17296	IADPSSKTL	9	36	466.2582351134165	930.501917293633	2	466.2579650878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IADPSSKTL_	COL12A1|p.G2777Wfs*37|1|0.15|ENSG00000111799|chr6:75102684-75102685|-/G|frameshift_variant;COL12A1|p.G3027Wfs*19|1|0.1|ENSG00000111799|chr6:75087680-75087681|-/G|frameshift_variant;ENSG00000111799|ENST00000322507|COL12A1;nc|ENSG00000111799|Q99715-2|COL12A1;nc|ENSG00000111799|Q99715-4|COL12A1	40.05817265558897	0.419577045485086	1				NaN	NaN	0	NaN	3798	3706	7504
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7507	25.097	NaN	2111.4	30	0	120.55	0.106			+	41323	SVLRAAAGTAI	11	65	515.306924827233	1028.599296721266	2	515.3070068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVLRAAAGTAI_	REV__ENSG00000070214|ENST00000374720|SLC44A1;REV__nc|ENSG00000070214|Q8WWI5-2|SLC44A1;REV__nc|ENSG00000070214|Q8WWI5-3|SLC44A1	59.93077597824379	0.32407304095777845	1				NaN	NaN	0	NaN	3799	3706	7504
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7508	25.098	NaN	2243.7	30	0	743.97	0.106				-1	ACPMPLLAL	9	36	334.510257565928	1000.5089432979839	3	334.5103454589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_AC(Carbamidomethyl (C))PM(Oxidation (M))PLLAL_	ENST00000577578.5_1_17:80203913-80204179:-|nuORF;ENST00000581241.5_1_17:80204068-80204179:-|nuORF	29.14955571784316	0.5308295550522326	1				NaN	NaN	0	NaN	3800	3706	7504
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7509	25.1	NaN	1234.3	30	0	177.06	0.106	+			636	ADWAAKKL	8	45	451.7582713148559	901.5019896965118	2	451.75799560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ADWAAKKL_	ENSG00000100345|ENST00000216181|MYH9;MYH9|p.I784*|1|0.07|ENSG00000100345|chr22:36304036-36304036|G/-|frameshift_variant	51.33545320467046	0.5859736979383976	1				NaN	NaN	0	NaN	3801	3706	7504
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7510	25.102	NaN	1536.2	30	0	192.98	0.037			+	30834	QEFHPRRR	8	44	563.3053478997913	1124.5961428663825	2	563.3054809570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QEFHPRRR_	REV__ENST00000397786.6_1_17:60140558-60140627:-|nuORF	19.996771675451527	0.7998311754834225	1				NaN	NaN	0	NaN	3802	3706	7504
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7519	25.124	NaN	25995	30	0	3494.8	0.214	+			15458	GTYVSSVPR	9	60	483.25591185087467	964.4972707685494	2	483.255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTYVSSVPR_	ENSG00000204252|ENST00000229829|HLA-DOA;ENST00000485901.1_1_6:32974617-32975137:-|nuORF	124.08010499294276	0.018729767491916592	1				NaN	NaN	0	NaN	3808	3709	7518
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7520	25.127	NaN	2282.4	30	0	419.73	0.106	+			36423	SETTERTVL	9	57	518.2698201170601	1034.5250873009202	2	518.2703857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SETTERTVL_	ENSG00000163946|ENST00000683822|TASOR;ENST00000459993.5_1_3:56657067-56667992:-|nuORF;nc|ENSG00000163946|Q9UK61-2|TASOR;nc|ENSG00000163946|Q9UK61-3|TASOR;nc|ENSG00000163946|Q9UK61-4|TASOR	61.691277971877994	0.19951612995419254	1				NaN	NaN	0	NaN	3809	3709	7518
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7521	25.129	NaN	1669	30	0	228.64	0.106				-1	GCWMSCMSP	9	50	537.6803678564926	1073.346182779785	2	537.6815185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_GC(Carbamidomethyl (C))WM(Oxidation (M))SCMSP_	FBXW4|p.P292Qfs*86|1|0.46|ENSG00000107829|chr10:101612444-101612444|A/-|frameshift_variant	18.324413293986947	0.6112419832031293	1				NaN	NaN	0	NaN	3810	3709	7518
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7522	25.131	NaN	2075.7	30	0	556.05	0.106			+	-1	GTVPHKCTVK	10	36	376.2051360486497	NaN	0	376.20526123046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_GTVPHKC(Carbamidomethyl (C))TVK_	REV__ENSG00000052126|ENST00000429027|PLEKHA5;REV__ENST00000539256.5_1_12:19282733-19418734:+|nuORF;REV__nc|ENSG00000052126|Q9HAU0-2|PLEKHA5;REV__nc|ENSG00000052126|Q9HAU0-3|PLEKHA5;REV__nc|ENSG00000052126|Q9HAU0-4|PLEKHA5;REV__nc|ENSG00000052126|Q9HAU0-5|PLEKHA5;REV__nc|ENSG00000052126|Q9HAU0|PLEKHA5;REV__PLEKHA5|p.K320Rfs*3|1|0.28|ENSG00000052126|chr12:19274641-19274641|A/-|frameshift_variant;REV__PLEKHA5|p.N310Kfs*8|2|0.26|ENSG00000052126|chr12:19274610-19274611|-/A|frameshift_variant;REV__PLEKHA5|p.N310Tfs*4|1|0.15|ENSG00000052126|chr12:19274611-19274611|A/-|frameshift_variant;REV__PLEKHA5|p.V152Ffs*33|1|0.35|ENSG00000052126|chr12:19257447-19257447|A/-|frameshift_variant	27.047317107675042	0.41136583337917604	1				NaN	NaN	0	NaN	3811	3709	7518
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7523	25.133	NaN	651.15	30	0	62.886	0.106	+			425	AATRIMLLP	9	36	329.20161018431025	NaN	0	329.20172119140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AATRIMLLP_	ENSG00000091128|ENST00000388781|LAMB4;ENST00000475469.1_1_7:107703197-107763609:-|nuORF;nc|ENSG00000091128|A4D0S4-2|LAMB4;nc|ENSG00000091128|A4D0S4-3|LAMB4	23.52269567125451	0.3573684076213556	1				NaN	NaN	0	NaN	3812	3709	7518
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7524	25.134	NaN	1343.7	30	0	274.49	0.035			+	31943	QQQLQPVAI	9	44	512.7951382297352	1023.5757235262705	2	512.7945556640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QQQLQPVAI_	REV__BPTF|p.D2844Afs*20|1|0.08|ENSG00000171634|chr17:67959766-67959767|-/C|frameshift_variant;REV__BPTF|p.K2718Nfs*36|3|0.12|ENSG00000171634|chr17:67948150-67948150|A/-|frameshift_variant;REV__ENSG00000171634|ENST00000306378|BPTF;REV__nc|ENSG00000171634|Q12830|BPTF	25.450171626174864	0.5654022654467333	1				NaN	NaN	0	NaN	3813	3709	7518
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7533	25.156	NaN	5108	30	0	2728.1	0.214	+			19804	KEDATKGKFAF	11	45	414.55583995057464	1240.6456904519239	3	414.5555114746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEDATKGKFAF_	ENSG00000170348|ENST00000303575|TMED10	41.080066990542036	0.5431644350485484	1				NaN	NaN	0	NaN	3819	3712	7532
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7534	25.16	NaN	2575.3	30	0	482.28	0.106	+			25417	LPLLPGAQAGA	11	40	336.5342029318414	1006.5807793957242	3	336.5343322753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LPLLPGAQAGA_	KCNG1|p.L244Tfs*274|1|0.11|ENSG00000026559|chr20:51009609-51009610|-/CACCTTTCAAAATGTCAGCCGCTGACAGGAATGGTTGTTTTCCTATATGCAATGT|frameshift_variant	15.641811463095205	0.7972481940378109	1				NaN	NaN	0	NaN	3820	3712	7532
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7535	25.162	NaN	1576.8	30	0	181.83	0.106			+	10227	ETHLVQPSS	9	59	499.2491967973283	996.4838406614566	2	499.24896240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ETHLVQPSS_	REV__ENSG00000184381|ENST00000332509|PLA2G6;REV__nc|ENSG00000184381|O60733-2|PLA2G6;REV__nc|ENSG00000184381|O60733-3|PLA2G6	66.42927471994793	0.16001998865088202	1				NaN	NaN	0	NaN	3821	3712	7532
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7536	25.163	NaN	840.25	30	0	90.266	0.106	+			11963	FVLPLLIVG	9	32	324.2167136402591	NaN	0	324.21673583984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FVLPLLIVG_	ENSG00000102195|ENST00000218316|GPR50;GPR50|p.P523Afs*8|1|0.18|ENSG00000102195|chrX:151181146-151181147|-/A|frameshift_variant	10.265252068803164	0.4022383999429647	1				NaN	NaN	0	NaN	3822	3712	7532
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7537	25.165	NaN	1691.1	30	0	172.64	0.106	+			47174	VLTHGRVRL	9	48	525.8317863594775	1049.649019785755	2	525.83154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VLTHGRVRL_	ENSG00000137154|ENST00000380394|RPS6	30.503639358989545	0.5181749237905803	1				NaN	NaN	0	NaN	3823	3712	7532
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7538	25.167	NaN	791.72	30	0	93.457	0.032			+	18449	ISEAKGIA	8	44	394.7296483959845	NaN	0	394.72943115234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ISEAKGIA_	REV__tr|U7T386|U7T386_FUSNUCelldivisionproteinFtsAOS=FusobacteriumnucleatumCTI-5OX=1316586GN=ftsAPE=3SV=1	30.503639358989545	1.7418937515398478	1				NaN	NaN	0	NaN	3824	3712	7532
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7549	25.191	NaN	5158.1	30	0	1027	0.214	+			39947	STMGYMMAK	9	64	518.2189044550572	1034.4232559769143	2	518.2190551757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_STMGYM(Oxidation (M))MAK_	ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;ENST00000518337.1_1_8:74128289-74128592:-|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P	68.78682469695295	0.14603441672067394	1				NaN	NaN	0	NaN	3832	3715	7548
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7550	25.194	NaN	3420	30	0	446.28	0.106	+			22765	KVFAGYYTK	9	67	538.7921351977578	1075.5697174623156	2	538.7925415039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVFAGYYTK_	ENSG00000152952|ENST00000282903|PLOD2;nc|ENSG00000152952|O00469-3|PLOD2;nc|ENSG00000152952|O00469|PLOD2;PLOD2|p.N725Mfs*11|1|0.12|ENSG00000152952|chr3:146070757-146070757|T/-|frameshift_variant	96.0336014099291	0.047854655524928534	1				NaN	NaN	0	NaN	3833	3715	7548
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7551	25.196	NaN	2870.4	30	0	648.63	0.106	+			32997	REFGANDNM	9	60	527.2244820937686	1052.4344112543372	2	527.2254028320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_REFGANDNM_	ENSG00000162896|ENST00000356495|PIGR	37.50817390946774	0.44948750990682723	1				NaN	NaN	0	NaN	3834	3715	7548
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7552	25.198	NaN	1579.1	30	0	229.82	0.106	+			43081	TEMEHEVAC	9	56	524.7078236449497	NaN	0	524.7080688476562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TEMEHEVAC_	ENSG00000167986|ENST00000301764|DDB1;ENST00000414411.3_1_11:61081295-61081943:-|nuORF	31.954861631926434	0.3162336699109506	1				NaN	NaN	0	NaN	3835	3715	7548
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7553	25.2	NaN	1695.3	30	0	280.6	0.106	+			23772	LCKECPKI	8	49	495.7578501233595	989.501147313519	2	495.7579345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_LC(Carbamidomethyl (C))KECPKI_	ENSG00000155189|ENST00000285518|AGPAT5	60.97194046774394	0.49215940876911696	1				NaN	NaN	0	NaN	3836	3715	7548
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7554	25.202	NaN	2025.1	30	0	421.79	0.106	+			12913	GESGLGKSTL	10	50	474.75303560302484	947.4915182728497	2	474.7521667480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GESGLGKSTL_	ENSG00000108387|ENST00000672673|SEPTIN4;ENSG00000122545|ENST00000350320|SEPTIN7;ENSG00000168385|ENST00000391971|SEPTIN2;ENSG00000180096|ENST00000321367|SEPTIN1;ENSG00000184702|ENST00000455784|SEPTIN5;ENST00000366210.2_1_2:242263647-242276275:+|nuORF;ENST00000425198.1_1_7:35872473-35938044:+|nuORF;ENST00000467971.5_1_2:242255375-242276932:+|nuORF;ENST00000477238.1_1_22:19707079-19707537:+|nuORF;ENST00000484740.1_1_2:242255375-242274650:+|nuORF;ENST00000494824.5_1_2:242255375-242275396:+|nuORF;ENST00000563743.1_1_16:30393079-30393866:-|nuORF;ENST00000563957.6_1_16:30392598-30394125:-|nuORF;ENST00000577440.5_1_17:56598198-56609324:-|nuORF;ENST00000584488.5_1_17:56598198-56606616:-|nuORF;ENST00000585170.1_1_17:56603011-56603617:-|nuORF;nc|ENSG00000108387|O43236-2|SEPTIN4;nc|ENSG00000108387|O43236-3|SEPTIN4;nc|ENSG00000108387|O43236-4|SEPTIN4;nc|ENSG00000108387|O43236-5|SEPTIN4;nc|ENSG00000108387|O43236-6|SEPTIN4;nc|ENSG00000108387|O43236|SEPTIN4;nc|ENSG00000122545|Q16181-2|SEPTIN7;nc|ENSG00000168385|Q15019-2|SEPTIN2;nc|ENSG00000168385|Q15019-3|SEPTIN2;nc|ENSG00000180096|Q8WYJ6-2|SEPTIN1;nc|ENSG00000284874|Q99719-2|SEPTIN5	51.52775601994872	0.4429225830406686	1				NaN	NaN	0	NaN	3837	3715	7548
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7555	25.203	NaN	1869.2	30	0	248.98	0.037	+			50203	WLTTSLSPSPA	11	56	580.3013895278914	NaN	0	580.3020629882812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_WLTTSLSPSPA_	ENST00000355790.8_2_10:72100332-72136219:-|nuORF	32.81241826257853	0.4191849651971536	1				NaN	NaN	0	NaN	3838	3715	7548
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7568	25.231	NaN	6367.6	30	0	591.14	0.214	+			40633	SVAQCQLMK	9	65	532.764945077606	1063.5153372220118	2	532.7655029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SVAQC(Carbamidomethyl (C))QLMK_	ENSG00000142208|ENST00000649815|AKT1	95.81516180277367	0.04847050768394289	1				NaN	NaN	0	NaN	3848	3718	7567
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7569	25.235	NaN	4834.2	30	0	2269.4	0.106			+	18746	ITKNLSALYL	10	54	379.2290200253572	1134.6652306762717	3	379.2289123535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ITKNLSALYL_	REV__L1PB1_dup10508|chr13:43056899-43059152:-|2.941020511291588|0.4940460713329822|2.57|483.0|28|1|sense	27.047317107675042	0.6589519614906109	1				NaN	NaN	0	NaN	3849	3718	7567
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7570	25.237	NaN	2489.3	30	0	540.03	0.106	+			20696	KGPQVSSAL	9	53	443.75319476793766	885.4918366026753	2	443.753173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KGPQVSSAL_	AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK	69.6276240434122	0.14239879520340665	1				NaN	NaN	0	NaN	3850	3718	7567
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7571	25.239	NaN	2596.5	30	0	193.27	0.106			+	-1	KKRNEQFLLF	10	71	682.886011829353	NaN	0	682.8862915039062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))KKRNEQFLLF_	REV__ENST00000409660.5_1_2:176844539-176860312:-|nuORF	37.50817390946774	0.3770175549877019	1				NaN	NaN	0	NaN	3851	3718	7567
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7572	25.24	NaN	2051.1	30	0	284.34	0.106	+			43598	TILEKFKEK	9	61	568.3398039088471	1134.665054884494	2	568.3403930664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TILEKFKEK_	CKAP5|p.K1126Rfs*25|1|0.46|ENSG00000175216|chr11:46767609-46767609|T/-|frameshift_variant;CKAP5|p.V1971Lfs*42|1|0.03|ENSG00000175216|chr11:46744211-46744212|-/TTGAAAAAAAG|frameshift_variant;ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5	122.93914200107957	0.019420478173996256	1				NaN	NaN	0	NaN	3852	3718	7567
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7573	25.242	NaN	3457.4	30	0	884.02	0.106	+			46147	VDREVPVAA	9	54	478.26414164792084	954.5137303626417	2	478.2641906738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VDREVPVAA_	ENSG00000122711|ENST00000379721|SPINK4	44.377184641726394	0.36891676396732553	1				NaN	NaN	0	NaN	3853	3718	7567
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7574	25.244	NaN	2255	30	0	327.39	0.037	+			50724	YEHPKDLKL	9	48	381.5450786879416	NaN	0	381.545166015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YEHPKDLKL_	ENSG00000147162|ENST00000373719|OGT;nc|ENSG00000147162|O15294-2|OGT;nc|ENSG00000147162|O15294-3|OGT;nc|ENSG00000147162|O15294-4|OGT	49.536043120802724	0.20989033510253738	1				NaN	NaN	0	NaN	3854	3718	7567
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7585	25.269	NaN	5258.8	30	0	346.52	0.214			+	7721	DLSKERFLR	9	67	582.3303945187206	1162.646236104241	2	582.3301391601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DLSKERFLR_	REV__ENSG00000116793|ENST00000369604|PHTF1;REV__nc|ENSG00000116793|Q9UMS5-2|PHTF1;REV__PHTF1|p.F546Sfs*2|1|0.17|ENSG00000116793|chr1:113705924-113705924|A/-|frameshift_variant;REV__PHTF1|p.M547Hfs*10|1|0.23|ENSG00000116793|chr1:113705923-113705924|-/A|frameshift_variant	37.15910966729921	0.4535818937225704	1				NaN	NaN	0	NaN	3862	3721	7584
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7586	25.273	NaN	5375.8	30	0	511.06	0.106			+	9218	EGSHERPPR	9	64	532.764945077606	1063.5153372220118	2	532.7651977539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EGSHERPPR_	REV__ENST00000491547.1_1_1:14925349-15387014:+|nuORF;REV__nc|ENSG00000189337|Q674X7-5|KAZN	39.252832667884924	0.4290233611298554	1				NaN	NaN	0	NaN	3863	3721	7584
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7587	25.275	NaN	9031.7	30	0	2197.2	0.106			+	429	AATVVDKCI	9	63	460.24997876441546	918.4854045956309	2	460.2496032714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AATVVDKCI_	REV__ENSG00000197746|ENST00000394936|PSAP;REV__nc|ENSG00000197746|P07602-2|PSAP;REV__nc|ENSG00000197746|P07602-3|PSAP;REV__PSAP|p.A285Pfs*38|1|0.45|ENSG00000197746|chr10:71821933-71821933|G/-|frameshift_variant;REV__PSAP|p.H144Tfs*2|1|0.38|ENSG00000197746|chr10:71829023-71829023|G/-|frameshift_variant;REV__PSAP|p.N426Tfs*37|1|0.2|ENSG00000197746|chr10:71819538-71819538|T/-|frameshift_variant	74.25504064058377	0.12238981753128622	1				NaN	NaN	0	NaN	3864	3721	7584
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7588	25.277	NaN	9001.2	30	0	3669.4	0.106			+	43536	TGVVEMIRKL	10	52	382.5617735673291	1144.6634913021874	3	382.5616455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TGVVEMIRKL_	REV__ENSG00000185386|ENST00000330651|MAPK11	44.116797842482775	0.5112108506279902	1				NaN	NaN	0	NaN	3865	3721	7584
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7589	25.278	NaN	2421.8	30	0	866.57	0.106	+			7281	DAPLLPPRV	9	47	489.29241146137605	976.5702699895521	2	489.29229736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DAPLLPPRV_	ENSG00000150471|ENST00000683033|ADGRL3;nc|ENSG00000150471|Q9HAR2-4|ADGRL3;nc|ENSG00000150471|Q9HAR2|ADGRL3	29.14955571784316	0.5308295550522326	1				NaN	NaN	0	NaN	3866	3721	7584
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7590	25.28	NaN	3273.4	30	0	1574.6	0.106	+			313	AAPRAPSAL	9	44	427.2481202539257	852.4816875746515	2	427.2476501464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AAPRAPSAL_	ENSG00000182158|ENST00000330387|CREB3L2;nc|ENSG00000182158|Q70SY1-2|CREB3L2	47.657333605630114	0.33044192980041115	1				NaN	NaN	0	NaN	3867	3721	7584
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7591	25.282	NaN	1622.5	30	0	339.76	0.034			+	11859	FTCAGGAVW	9	41	456.20845456845626	910.4023562037125	2	456.2081604003906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FTCAGGAVW_	REV__ENSG00000243279|ENST00000553851|PRAF2	31.954861631926434	0.5046124803899898	1				NaN	NaN	0	NaN	3868	3721	7584
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7602	25.307	NaN	3523.5	30	0	791.37	0.213	+			32261	QTLPNAAYNNR	11	57	631.3178093298026	1260.621065726405	2	631.318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QTLPNAAYNNR_	ENSG00000102837|ENST00000219022|OLFM4	72.87924865735499	0.21173632944124365	1				NaN	NaN	0	NaN	3876	3724	7601
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7603	25.311	NaN	3632	30	0	789.69	0.106			+	39932	STMGHDAGLF	10	58	518.2318284073224	1034.4491038814447	2	518.2325439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STMGHDAGLF_	REV__ENST00000470506.1_1_2:58390551-58390605:-|nuORF	51.33545320467046	0.4446945571623749	1				NaN	NaN	0	NaN	3877	3724	7601
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7604	25.313	NaN	2504.1	30	0	832.56	0.106	+			14946	GTMKAQGVLLK	11	63	573.3391154044785	1144.663677875757	2	573.3397827148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTMKAQGVLLK_	nc|ENSG00000166482|P55083-2|MFAP4	72.2432373244024	0.21703855426835802	1				NaN	NaN	0	NaN	3878	3724	7601
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7605	25.314	NaN	1063	30	0	73.55	0.106	+			1800	AIFQEAVHK	9	55	521.7884521484375	NaN	0	521.7884521484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AIFQEAVHK_	ENSG00000263528|ENST00000581977|IKBKE;IKBKE|p.R348Dfs*32|1|0.58|ENSG00000263528|chr1:206478987-206478987|C/-|frameshift_variant;nc|ENSG00000263528|Q14164-2|IKBKE	44.377184641726394	0.24544280798894275	1				NaN	NaN	0	NaN	3879	3724	7601
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7606	25.316	NaN	846.99	30	0	140.14	0.032			+	29870	PLGHVLGV	8	40	396.242346748486	790.470140563772	2	396.2424621582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PLGHVLGV_	REV__ENSG00000148154|ENST00000374279|UGCG;REV__UGCG|p.L365Cfs*9|4|0.31|ENSG00000148154|chr9:111932900-111932900|T/-|frameshift_variant	33.49298260027079	0.7007254697536482	1				NaN	NaN	0	NaN	3880	3724	7601
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7617	25.341	NaN	2651.8	30	0	308.97	0.214	+			28729	NNRSLDLD	8	52	473.7327825989549	945.4510122647098	2	473.7327880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NNRSLDLD_	CON__P04264;CON__P12035;CON__P50446;CON__Q5XQN5;CON__Q6IFZ6;CON__Q7Z794;CON__Q8BGZ7;CON__Q922U2;ENSG00000167768|ENST00000252244|KRT1;ENSG00000186442|ENST00000417996|KRT3;ENSG00000189182|ENST00000341809|KRT77	64.20726635412375	0.4601301477144759	1				NaN	NaN	0	NaN	3888	3727	7616
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7618	25.345	NaN	2605.4	30	0	724.23	0.106	+			37493	SLKTKLLVS	9	46	330.2181703784437	987.6326817355312	3	330.21820068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLKTKLLVS_	ENSG00000166743|ENST00000520010|ACSM1;nc|ENSG00000166743|Q08AH1-2|ACSM1	24.519189625965996	0.574102787014149	1				NaN	NaN	0	NaN	3889	3727	7616
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7619	25.347	NaN	1862.8	30	0	493.35	0.106	+			6959	CPNGGSLTHTY	11	51	603.7641504896008	1205.5137480460014	2	603.7657470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_C(Carbamidomethyl (C))PNGGSLTHTY_	nc|ENSG00000198788|Q02817|MUC2	49.536043120802724	0.4274608637932522	1				NaN	NaN	0	NaN	3890	3727	7616
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7620	25.349	NaN	977.33	30	0	122.15	0.106	+			8827	EELLNKLK	8	40	493.79803466796875	NaN	0	493.79803466796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EELLNKLK_	ENSG00000128641|ENST00000392318|MYO1B;MYO1B|p.A603Sfs*37|1|0.42|ENSG00000128641|chr2:191390310-191390311|-/A|frameshift_variant;MYO1B|p.F948Cfs*47|1|0.41|ENSG00000128641|chr2:191411140-191411141|-/TG|frameshift_variant;MYO1B|p.S730Afs*4|2|0.4|ENSG00000128641|chr2:191393178-191393178|A/-|frameshift_variant;nc|ENSG00000128641|O43795-2|MYO1B	51.33545320467046	1.7418937515398478	1				NaN	NaN	0	NaN	3891	3727	7616
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7621	25.35	NaN	1106.3	30	0	328.09	0.106	+			7245	DALPRLPVP	9	34	326.5306396484375	NaN	0	326.5306396484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DALPRLPVP_	ENSG00000095321|ENST00000318080|CRAT;ENST00000464290.5_1_9:131865327-131873452:-|nuORF;nc|ENSG00000095321|P43155-2|CRAT;nc|ENSG00000095321|P43155-3|CRAT	25.450171626174864	0.34907449758287085	1				NaN	NaN	0	NaN	3892	3727	7616
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7622	25.352	NaN	1391.3	30	0	166.12	0.036	+			49738	VYNQPGHQF	9	57	545.2593639307307	1088.5041749282614	2	545.2595825195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VYNQPGHQF_	ENSG00000214814|ENST00000522917|FER1L6;FER1L6|p.D1516Gfs*3|1|0.06|ENSG00000214814|chr8:124091575-124091576|-/G|frameshift_variant;FER1L6|p.E470Gfs*8|2|0.42|ENSG00000214814|chr8:123980801-123980802|-/C|frameshift_variant;FER1L6|p.F1321Lfs*26|1|0.16|ENSG00000214814|chr8:124070594-124070595|-/GTTGAATTCAC|frameshift_variant;FER1L6|p.G1237Afs*10|1|0.35|ENSG00000214814|chr8:124067790-124067790|A/-|frameshift_variant;FER1L6|p.N1273Tfs*23|1|0.44|ENSG00000214814|chr8:124069454-124069454|C/-|frameshift_variant	37.15910966729921	0.4535818937225704	1				NaN	NaN	0	NaN	3893	3727	7616
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7626	25.366	NaN	1235.8	30	0	601.01	0.214	+			16725	HLGLPGARG	9	27	439.25297521587595	876.4913974985519	2	439.2527160644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HLGLPGARG_	ENSG00000197768|ENST00000412566|STPG3;nc|ENSG00000197768|Q8N7X2-1|STPG3;nc|ENSG00000197768|Q8N7X2|STPG3	20.481830146152948	0.6112419832031293	1				NaN	NaN	0	NaN	3894	3730	7625
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7627	25.37	NaN	951.93	30	0	234.4	0.106	+			47387	VPKGLVAV	8	38	391.7616294315264	NaN	0	391.7613830566406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VPKGLVAV_	ENST00000604215.1_1_2:179441912-179442077:+|nuORF	14.664097394203935	1.7418937515398478	1				NaN	NaN	0	NaN	3895	3730	7625
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7628	25.372	NaN	1906	30	0	136.55	0.106			+	8722	EEEHDLKM	8	54	515.7274169921875	NaN	0	515.7274169921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EEEHDLKM_	REV__ENSG00000124194|ENST00000342560|GDAP1L1;REV__nc|ENSG00000124194|Q96MZ0-4|GDAP1L1	53.351449002276354	1.7418937515398478	1				NaN	NaN	0	NaN	3896	3730	7625
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7629	25.374	NaN	1839.6	30	0	211.03	0.106	+			21732	KQLIEEKI	8	49	500.80532751667954	NaN	0	500.805908203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KQLIEEKI_	ENSG00000088247|ENST00000600480|KHSRP;KHSRP|p.A487T|1|0.24|ENSG00000088247|chr19:6416519-6416519|C/T|missense_variant;KHSRP|p.G663Vfs*60|1|0.14|ENSG00000088247|chr19:6415280-6415280|C/-|frameshift_variant;KHSRP|p.Q699Sfs*24|1|0.35|ENSG00000088247|chr19:6415173-6415173|G/-|frameshift_variant;nc|ENSG00000088247|Q92945|KHSRP	66.42927471994793	1.7418937515398478	1				NaN	NaN	0	NaN	3897	3730	7625
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7630	25.376	NaN	1073.9	30	0	107.12	0.106	+			38039	SPPVKAVPI	9	47	454.2841350830373	906.5537172328746	2	454.2843017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SPPVKAVPI_	ENSG00000213676|ENST00000375203|ATF6B;ENST00000494022.1_1_6:32065974-32085368:-|nuORF;nc|ENSG00000213676|Q99941-2|ATF6B	35.61828744233558	0.47037581924408073	1				NaN	NaN	0	NaN	3898	3730	7625
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7631	25.377	NaN	1249.1	30	0	194.36	0.035			+	50063	WFLDPSTL	8	44	489.7482727011037	NaN	0	489.7493896484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_WFLDPSTL_	REV__ENSG00000130702|ENST00000252999|LAMA5;REV__LAMA5|p.A3459Qfs*25|1|0.42|ENSG00000130702|chr20:62310736-62310736|C/-|frameshift_variant;REV__LAMA5|p.L1522Wfs*35|1|0.42|ENSG00000130702|chr20:62328329-62328329|G/-|frameshift_variant;REV__LAMA5|p.L2137Afs*29|1|0.31|ENSG00000130702|chr20:62322110-62322111|-/G|frameshift_variant;REV__LAMA5|p.P3242Rfs*47|1|0.41|ENSG00000130702|chr20:62311700-62311700|C/-|frameshift_variant;REV__LAMA5|p.R1573Afs*84|1|0.4|ENSG00000130702|chr20:62327946-62327946|G/-|frameshift_variant	40.5726180659479	1.7418937515398478	1				NaN	NaN	0	NaN	3899	3730	7625
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7639	25.397	NaN	2483.5	30	0	937.74	0.214	+			23390	LAAFASFLSHA	11	51	378.8700998746222	NaN	0	378.53643798828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LAAFASFLSHA_	nc|ENSG00000175701|Q8NCU8-1|MTLN	26.063383197487333	0.44926255568796863	1				NaN	NaN	0	NaN	3904	3733	7638
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7640	25.401	NaN	1726.5	30	0	137.55	0.038			+	9282	EHLDPFLQTT	10	70	600.7982537263889	1199.5819545195777	2	600.7981567382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EHLDPFLQTT_	REV__ENST00000330714.7_1_21:42780219-42780591:+|nuORF	31.634271133179894	0.6214930414500597	1				NaN	NaN	0	NaN	3905	3733	7638
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7648	25.421	NaN	1156.8	30	0	121.82	0.144	+			37467	SLKGEKRKN	9	51	530.3167114257812	NaN	0	530.3167114257812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLKGEKRKN_	ZGRF1|p.L1339R|1|0.34|ENSG00000138658|chr4:112585626-112585626|A/C|missense_variant	37.81151784470057	0.28666463014928195	1				NaN	NaN	0	NaN	3910	3736	7647
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7654	25.437	NaN	1625.3	30	0	176.22	0.14				-1	 	0	48	384.7720625920663	767.5295722509326	2	384.7720947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	3913	3739	7653
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7666	25.476	NaN	3305.7	30	0	445.15	0.214			+	-1	CPCCCFVE	8	62	537.6803678564926	1073.346182779785	2	537.6808471679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	3 Carbamidomethyl (C)	_C(Carbamidomethyl (C))PC(Carbamidomethyl (C))CC(Carbamidomethyl (C))FVE_	REV__ENST00000346964.6_2_3:196770181-196770280:-|nuORF	21.70233525837049	0.7917639344264583	1				NaN	NaN	0	NaN	3919	3745	7665
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7667	25.48	NaN	3366.1	30	0	485.1	0.106	+			27721	MQLGVHYSK	9	60	531.7736605332965	1061.532768133393	2	531.7745971679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MQLGVHYSK_	ENST00000430246.6_1_14:21731784-21731862:-|nuORF;ENST00000554969.5_1_14:21731484-21731862:-|nuORF	85.86182877749512	0.07653218437724067	1				NaN	NaN	0	NaN	3920	3745	7665
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7668	25.482	NaN	2427.6	30	0	1060.9	0.106	+			10572	EYGLYGAMVR	10	61	579.7847924547274	1157.5550319762547	2	579.7847900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EYGLYGAMVR_	ENSG00000100987|ENST00000376709|VSX1;ENSG00000119614|ENST00000261980|VSX2;nc|ENSG00000100987|Q9NZR4-5|VSX1;nc|ENSG00000100987|Q9NZR4-8|VSX1	32.81241826257853	0.6118718159329168	1				NaN	NaN	0	NaN	3921	3745	7665
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7669	25.483	NaN	832.76	30	0	131.44	0.106			+	5937	AVLISTMIP	9	43	472.77909809568297	NaN	0	472.77862548828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVLISTMIP_	REV__SLC44A4|p.G647V|1|0.11|ENSG00000204385|chr6:31864723-31864723|C/A|missense_variant	45.9519527083369	0.2345902329052062	1				NaN	NaN	0	NaN	3922	3745	7665
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7670	25.485	NaN	1793.1	30	0	578.75	0.106			+	-1	CSRSSTFCIRT	11	47	659.3066444467593	1316.5987359603184	2	659.3072509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_C(Carbamidomethyl (C))SRSSTFCIRT_	REV__ENST00000503370.5_1_4:123833765-123838759:-|nuORF	36.31764250033197	0.6083289427130232	1				NaN	NaN	0	NaN	3923	3745	7665
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7671	25.487	NaN	1402.5	30	0	161.21	0.034	+			41531	SVQAALKLK	9	47	479.3079447600698	956.6013365869396	2	479.3086853027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVQAALKLK_	ENSG00000160679|ENST00000368694|CHTOP;nc|ENSG00000160679|Q9Y3Y2-3|CHTOP;nc|ENSG00000160679|Q9Y3Y2-4|CHTOP	75.04331003522576	0.118981335847003	1				NaN	NaN	0	NaN	3924	3745	7665
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7676	25.502	NaN	3223	30	0	593.38	0.214	+			22863	KVKLYKDN	8	46	336.5342029318414	1006.5807793957242	3	336.5343017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVKLYKDN_	ENSG00000102241|ENST00000218364|HTATSF1;HTATSF1|p.K555Nfs*38|1|0.74|ENSG00000102241|chrX:136511406-136511406|A/-|frameshift_variant;HTATSF1|p.T358Pfs*9|1|0.2|ENSG00000102241|chrX:136510815-136510815|A/-|frameshift_variant;HTATSF1|p.V610Cfs*2|1|0.32|ENSG00000102241|chrX:136511568-136511568|A/-|frameshift_variant	26.79610172149135	0.7524337208463756	1				NaN	NaN	0	NaN	3926	3748	7675
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7677	25.505	NaN	1769.4	30	0	169.83	0.034	+			1206	AEQIKHIL	8	53	476.284472578713	950.554392224226	2	476.28466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEQIKHIL_	ENSG00000133112|ENST00000530705|TPT1;ENST00000458298.1_1_6:86137181-86137394:-|nuORF;ENST00000490277.1_1_13:45913571-45913754:-|nuORF;nc|ENSG00000133112|P13693-2|TPT1	74.25504064058377	0.37144338840759816	1				NaN	NaN	0	NaN	3927	3748	7675
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7687	25.529	NaN	4423.1	30	0	396.42	0.214	+			9398	EKEVKLKQ	8	70	501.3038461835397	1000.5931394338794	2	501.30322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EKEVKLKQ_	CAMSAP1|p.E781Afs*3|1|0.06|ENSG00000130559|chr9:135822319-135822320|-/G|frameshift_variant;CAMSAP1|p.P417Sfs*23|1|0.04|ENSG00000130559|chr9:135824855-135824856|-/A|frameshift_variant;CAMSAP1|p.Q633Sfs*8|1|0.28|ENSG00000130559|chr9:135822764-135822764|G/-|frameshift_variant;CAMSAP1|p.V388Rfs*19|1|0.26|ENSG00000130559|chr9:135827468-135827469|-/G|frameshift_variant;ENSG00000130559|ENST00000389532|CAMSAP1;ENST00000312405.10_1_9:138742295-138774724:-|nuORF;ENST00000460094.1_1_9:138758268-138774700:-|nuORF;ENST00000468150.1_1_9:138757111-138773499:-|nuORF;nc|ENSG00000130559|Q5T5Y3-3|CAMSAP1	127.46168284122857	0.2238874366747666	1				NaN	NaN	0	NaN	3934	3751	7686
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7688	25.532	NaN	2977.6	30	0	468.06	0.106	+			43030	TEKVSKISL	9	55	335.53765352276645	1003.5911311684994	3	335.53759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEKVSKISL_	ENSG00000054523|ENST00000676179|KIF1B;ENSG00000130294|ENST00000498729|KIF1A;KIF1A|p.N1306Kfs*14|1|0.46|ENSG00000130294|chr2:240725306-240725307|-/T|frameshift_variant;KIF1A|p.R782Afs*30|1|0.33|ENSG00000130294|chr2:240760738-240760738|G/-|frameshift_variant;KIF1B|p.N365Mfs*8|1|0.32|ENSG00000054523|chr1:10278037-10278037|C/-|frameshift_variant;nc|ENSG00000054523|O60333-2|KIF1B;nc|ENSG00000054523|O60333-3|KIF1B;nc|ENSG00000054523|O60333-4|KIF1B;nc|ENSG00000130294|Q12756-2|KIF1A;nc|ENSG00000130294|Q12756|KIF1A	65.46538089061403	0.16805504838372562	1				NaN	NaN	0	NaN	3935	3751	7686
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7689	25.534	NaN	2166.7	30	0	453.41	0.106	+			40080	STNSFALNK	9	53	491.25323133640666	980.4919097396133	2	491.2532653808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STNSFALNK_	BPTF|p.D2844Afs*20|1|0.08|ENSG00000171634|chr17:67959766-67959767|-/C|frameshift_variant;BPTF|p.K2718Nfs*36|3|0.12|ENSG00000171634|chr17:67948150-67948150|A/-|frameshift_variant;ENSG00000171634|ENST00000306378|BPTF;ENST00000579209.1_1_17:62758032-62758825:-|nuORF;nc|ENSG00000171634|Q12830-4|BPTF;nc|ENSG00000171634|Q12830|BPTF	101.45984612302182	0.0377122763612125	1				NaN	NaN	0	NaN	3936	3751	7686
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7690	25.536	NaN	1148.3	30	0	135	0.106			+	36143	SEKSPIQQL	9	45	515.2825618662855	1028.550570799371	2	515.2822875976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SEKSPIQQL_	REV__ENST00000392253.2_1_2:202275976-202276645:-|nuORF	56.43379154798735	0.2433427591689151	1				NaN	NaN	0	NaN	3937	3751	7686
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7691	25.538	NaN	1570.3	30	0	628.3	0.106			+	38289	SQQRIALVK	9	40	348.2183137347284	NaN	0	348.21807861328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SQQRIALVK_	REV__ENSG00000149292|ENST00000529221|TTC12;REV__nc|ENSG00000149292|Q9H892-2|TTC12	23.52269567125451	0.3573684076213556	1				NaN	NaN	0	NaN	3938	3751	7686
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7692	25.54	NaN	1840.6	30	0	324.07	0.106			+	25981	LSIYVMLVL	9	38	350.8816833496094	NaN	0	350.8816833496094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSIYVMLVL_	REV__ENSG00000159110|ENST00000342136|IFNAR2;REV__ENST00000420068.1_1_21:34602513-34619036:+|nuORF;REV__nc|ENSG00000159110|P48551-2|IFNAR2;REV__nc|ENSG00000159110|P48551-3|IFNAR2	35.61828744233558	0.29773779453147337	1				NaN	NaN	0	NaN	3939	3751	7686
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7693	25.541	NaN	690.15	30	0	71.267	0.034			+	11661	FQNTTLNK	8	40	483.25591185087467	964.4972707685494	2	483.255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FQNTTLNK_	REV__ENSG00000184083|ENST00000375180|FAM120C	35.61828744233558	0.6843154725607303	1				NaN	NaN	0	NaN	3940	3751	7686
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7703	25.565	NaN	3880.5	30	0	584.7	0.214	+			23050	KVTEGSFVYK	10	65	579.313342905806	1156.612132878412	2	579.313720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVTEGSFVYK_	ENSG00000057608|ENST00000380191|GDI2;GDI2|p.S222Afs*20|1|0.1|ENSG00000057608|chr10:5785197-5785197|T/-|frameshift_variant	125.71293069911285	0.01926106323661889	1				NaN	NaN	0	NaN	3947	3754	7702
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7704	25.568	NaN	1646.4	30	0	198.32	0.106	+			5622	AVCSIVTQR	9	55	517.2763094950415	1032.5380660568828	2	517.27587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_AVC(Carbamidomethyl (C))SIVTQR_	ENSG00000130695|ENST00000451429|CEP85;nc|ENSG00000130695|Q6P2H3-3|CEP85;nc|ENSG00000130695|Q6P2H3-4|CEP85;nc|ENSG00000130695|Q6P2H3|CEP85	52.936696900407355	0.27249468807391813	1				NaN	NaN	0	NaN	3948	3754	7702
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7705	25.57	NaN	1245	30	0	248.57	0.106	+			18674	ITADHLIEK	9	55	520.2927051843342	1038.5708574354683	2	520.2932739257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ITADHLIEK_	ENSG00000111911|ENST00000229633|HINT3	47.95952297671804	0.32689736945648856	1				NaN	NaN	0	NaN	3949	3754	7702
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7706	25.572	NaN	1222.9	30	0	205.04	0.037				-1	KITAVTLMVM	10	47	569.8125	NaN	0	569.8125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Oxidation (M)	_KITAVTLM(Oxidation (M))VM(Oxidation (M))_	PLG|p.N529Ifs*10|1|0.17|ENSG00000122194|chr6:160731886-160731886|A/-|frameshift_variant	23.52269567125451	0.42010282974921537	1				NaN	NaN	0	NaN	3950	3754	7702
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7713	25.59	NaN	32362	30	0	3454.2	0.214	+			11454	FNDPNAKEM	9	84	533.237084084523	1064.4596152358458	2	533.2373657226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FNDPNAKEM_	ENSG00000056097|ENST00000265069|ZFR	186.41076107051632	0.0006524797715399015	1				NaN	NaN	0	NaN	3954	3757	7712
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7714	25.594	NaN	5625.6	30	0	810.74	0.106	+			35852	SEDKKNIIL	9	69	530.3060192454585	1058.597485557717	2	530.3062133789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEDKKNIIL_	ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65623404-65625570:-|nuORF	93.19546047674547	0.05585629608842056	1				NaN	NaN	0	NaN	3955	3757	7712
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7715	25.596	NaN	1252.2	30	0	119.31	0.106	+			36287	SEQSLGQKL	9	54	495.2664929780255	988.518433022851	2	495.26617431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEQSLGQKL_	ENSG00000104738|ENST00000649973|MCM4;MCM4|p.T629Qfs*18|2|0.31|ENSG00000104738|chr8:47971419-47971419|A/-|frameshift_variant	93.1432384553994	0.056003526918089595	1				NaN	NaN	0	NaN	3956	3757	7712
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7716	25.598	NaN	1014.3	30	0	181.22	0.035			+	-1	TGTGALHSCL	10	46	508.7432932857144	NaN	0	508.7435607910156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_TGTGALHSC(Carbamidomethyl (C))L_	REV__ENST00000253413.9_1_22:18111444-18111552:-|nuORF	32.81241826257853	0.3924360933802784	1				NaN	NaN	0	NaN	3957	3757	7712
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7726	25.619	NaN	11768	30	0	2732.2	0.214	+			1803	AIFQGKLEK	9	69	517.3056626781027	1032.5967724230054	2	517.3058471679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AIFQGKLEK_	ENSG00000118322|ENST00000327245|ATP10B	146.78539889680295	0.007618400906539062	1				NaN	NaN	0	NaN	3964	3760	7725
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7727	25.623	NaN	28696	30	0	19308	0.106				-1	 	0	62	345.20602822860644	1032.5962552860194	3	345.2060852050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	3965	3760	7725
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7728	25.625	NaN	2594	30	0	293.98	0.106	+			15690	GVMVGMGQK	9	48	453.73040684295415	905.4462607527083	2	453.7301330566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GVMVGMGQK_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENST00000457622.1_1_6:46172676-46173294:+|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000473016.1_1_2:74120109-74129648:+|nuORF;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000488967.5_1_10:90706975-90712518:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF	92.19062340807069	0.05868925795948219	1				NaN	NaN	0	NaN	3966	3760	7725
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7729	25.627	NaN	2640.1	30	0	427.58	0.106	+			20563	KFSAINGL	8	49	425.24500207571134	848.4754512182227	2	425.2448425292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KFSAINGL_	DNAH11|p.A2559Sfs*4|1|0.42|ENSG00000105877|chr7:21738723-21738724|-/A|frameshift_variant;DNAH11|p.A4348Tfs*8|1|0.06|ENSG00000105877|chr7:21894990-21894991|-/CACTTTA|frameshift_variant;DNAH11|p.C1251Mfs*5|1|0.41|ENSG00000105877|chr7:21606521-21606522|-/A|frameshift_variant;DNAH11|p.C1849Sfs*8|1|0.05|ENSG00000105877|chr7:21683868-21683869|-/CTAAAATTCTCATAAATAG|frameshift_variant;DNAH11|p.E3097Nfs*4|1|0.21|ENSG00000105877|chr7:21773946-21773946|A/-|frameshift_variant;DNAH11|p.K1250Nfs*43|1|0.63|ENSG00000105877|chr7:21606522-21606522|A/-|frameshift_variant;DNAH11|p.K873Nfs*4|1|0.31|ENSG00000105877|chr7:21591523-21591523|A/-|frameshift_variant;DNAH11|p.L3180Sfs*6|1|0.05|ENSG00000105877|chr7:21784481-21784482|-/CAGA|frameshift_variant;DNAH11|p.N2201Kfs*6|1|0.04|ENSG00000105877|chr7:21707754-21707755|-/AGTAAAAGATTTC|frameshift_variant;DNAH11|p.N3090Kfs*2|1|0.09|ENSG00000105877|chr7:21773928-21773929|-/A|frameshift_variant;DNAH11|p.N833Tfs*2|1|0.17|ENSG00000105877|chr7:21591404-21591404|A/-|frameshift_variant;DNAH11|p.Q945Kfs*4|1|0.32|ENSG00000105877|chr7:21599946-21599946|T/-|frameshift_variant;DNAH11|p.S2374Qfs*2|1|0.14|ENSG00000105877|chr7:21717910-21717911|-/C|frameshift_variant;DNAH11|p.T4414Nfs*34|1|0.37|ENSG00000105877|chr7:21900050-21900051|-/A|frameshift_variant;DNAH11|p.T4414Qfs*72|3|0.34|ENSG00000105877|chr7:21900051-21900051|A/-|frameshift_variant;DNAH11|p.W2255Mfs*9|1|0.04|ENSG00000105877|chr7:21710627-21710628|-/A|frameshift_variant;ENSG00000105877|ENST00000409508|DNAH11	71.37791200682192	0.3954169775488141	1				NaN	NaN	0	NaN	3967	3760	7725
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7730	25.629	NaN	2328.4	30	0	451.19	0.106	+			17776	IESSVGKSL	9	51	460.2584341680658	918.5023154029316	2	460.2580871582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IESSVGKSL_	ENSG00000151151|ENST00000373935|IPMK	82.7504851949679	0.08565546331141553	1				NaN	NaN	0	NaN	3968	3760	7725
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7731	25.63	NaN	2018.7	30	0	223.81	0.106			+	50282	WRRHRFQYQCE	11	63	804.8835674210617	NaN	0	804.8815307617188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_WRRHRFQYQCE_	REV__ENSG00000114251|ENST00000264634|WNT5A;REV__ENST00000497817.1_1_3:55513315-55514913:-|nuORF;REV__nc|ENSG00000114251|P41221-2|WNT5A	8.693696342081763	0.456735970842152	1				NaN	NaN	0	NaN	3969	3760	7725
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7732	25.632	NaN	1076.3	30	0	121.22	0.039	+			50891	YFSQLQELCW	10	45	658.8012283101793	NaN	0	658.8007202148438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YFSQLQELCW_	ENSG00000196620|ENST00000338206|UGT2B15;ENSG00000197888|ENST00000317746|UGT2B17;UGT2B15|p.N214Ifs*2|1|0.36|ENSG00000196620|chr4:68669978-68669978|T/-|frameshift_variant;UGT2B17|p.E119K|1|0.37|ENSG00000197888|chr4:68568130-68568130|C/T|missense_variant	14.864876125193954	0.4201028297492154	1				NaN	NaN	0	NaN	3970	3760	7725
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7740	25.652	NaN	2575.9	30	0	660.48	0.214	+			51546	YYDTHTNTY	9	52	589.2435761491307	1176.4725993650613	2	589.2435913085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YYDTHTNTY_	ENSG00000064651|ENST00000262461|SLC12A2;nc|ENSG00000064651|P55011-3|SLC12A2;SLC12A2|p.E1119Rfs*7|1|0.47|ENSG00000064651|chr5:128184417-128184418|-/A|frameshift_variant;SLC12A2|p.F466Lfs*59|1|0.11|ENSG00000064651|chr5:128135793-128135793|T/-|frameshift_variant;SLC12A2|p.P1171Sfs*18|1|0.38|ENSG00000064651|chr5:128186498-128186499|-/TC|frameshift_variant	104.0567914643314	0.03506238181059741	1				NaN	NaN	0	NaN	3975	3763	7739
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7741	25.656	NaN	2011.9	30	0	266.04	0.106			+	10106	ESLNKVKNET	10	59	581.3091188347645	1160.603684736329	2	581.3099975585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ESLNKVKNET_	REV__ENSG00000006788|ENST00000252172|MYH13;REV__MYH13|p.K1396Nfs*37|1|0.46|ENSG00000006788|chr17:10312751-10312751|T/-|frameshift_variant	37.81151784470057	0.569310847604193	1				NaN	NaN	0	NaN	3976	3763	7739
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7742	25.658	NaN	1803.3	30	0	262.14	0.106	+			9332	EIIFIGGGSII	11	47	559.8239988601259	1117.6334447870518	2	559.8246459960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EIIFIGGGSII_	ENST00000371227.8_1_10:97074711-97074810:-|nuORF	39.252832667884924	0.5681665794958463	1				NaN	NaN	0	NaN	3977	3763	7739
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7743	25.66	NaN	3945.2	30	0	784.24	0.106	+			17838	IFKKEGLQ	8	54	481.7867934095099	961.5590338858199	2	481.7870788574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IFKKEGLQ_	ENSG00000184634|ENST00000374080|MED12;nc|ENSG00000184634|Q93074-2|MED12;nc|ENSG00000184634|Q93074-3|MED12	138.24224950522367	0.2516046410063719	1				NaN	NaN	0	NaN	3978	3763	7739
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7744	25.661	NaN	1779.4	30	0	239.34	0.106	+			20143	KEKPPITVV	9	54	505.81583845281483	1009.6171239724297	2	505.8153381347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEKPPITVV_	ENSG00000141127|ENST00000268835|PRPSAP2;ENSG00000161542|ENST00000446526|PRPSAP1;ENST00000472686.1_1_17:74309820-74324990:-|nuORF;ENST00000592474.1_1_17:74309820-74309979:-|nuORF;nc|ENSG00000141127|O60256-2|PRPSAP2;nc|ENSG00000141127|O60256-3|PRPSAP2;nc|ENSG00000141127|O60256-4|PRPSAP2;nc|ENSG00000161542|Q14558|PRPSAP1	31.529811441608018	0.5085848003137583	1				NaN	NaN	0	NaN	3979	3763	7739
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7745	25.663	NaN	1512.6	30	0	198.07	0.039	+			19571	KCSRAEAEAWY	11	57	657.3003909110074	1312.5862288888147	2	657.3010864257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KCSRAEAEAWY_	CON__P08729;CON__Q3KNV1;ENSG00000135480|ENST00000331817|KRT7;ENST00000548088.1_1_12:52632481-52635423:+|nuORF;ENST00000551130.1_1_12:52635330-52637101:+|nuORF;ENST00000552183.1_1_12:52635324-52638266:+|nuORF	30.317721548370564	0.6717830234747728	1				NaN	NaN	0	NaN	3980	3763	7739
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7752	25.68	NaN	5212.1	30	0	1133.6	0.215	+			12965	GETGLGKSTL	10	58	481.76097436912545	961.5073958050509	2	481.7611083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GETGLGKSTL_	ENSG00000125354|ENST00000394610|SEPTIN6;nc|ENSG00000125354|Q14141-3|SEPTIN6;nc|ENSG00000125354|Q14141-4|SEPTIN6;nc|ENSG00000125354|Q14141|SEPTIN6	65.15724298150197	0.31893571707528906	1				NaN	NaN	0	NaN	3984	3766	7751
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7753	25.684	NaN	1668.1	30	0	190.55	0.106	+			4884	ATQCGSLIGK	10	59	489.25861762413626	976.5026823150725	2	489.2586669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATQCGSLIGK_	ENSG00000169564|ENST00000303577|PCBP1	79.48907831485694	0.19979514868675113	1				NaN	NaN	0	NaN	3985	3766	7751
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7754	25.686	NaN	1936.5	30	0	234.64	0.106	+			3238	ASLDGETNLK	10	62	524.2696879128048	1046.5248228924095	2	524.27001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASLDGETNLK_	ATP11B|p.H616Cfs*3|1|0.09|ENSG00000058063|chr3:182869310-182869311|TC/-|frameshift_variant;ATP11B|p.Y884Ifs*30|1|0.41|ENSG00000058063|chr3:182884886-182884886|T/-|frameshift_variant;ENSG00000058063|ENST00000323116|ATP11B;ENSG00000118322|ENST00000327245|ATP10B;ENST00000521033.5_1_5:160061154-160212677:-|nuORF;nc|ENSG00000118322|O94823-2|ATP10B;nc|ENSG00000118322|O94823-3|ATP10B	65.15724298150197	0.31893571707528906	1				NaN	NaN	0	NaN	3986	3766	7751
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7755	25.687	NaN	1550.4	30	0	622.2	0.106	+			21200	KLEDGPKFLK	10	30	392.23259044468455	1173.6759419342536	3	392.2326354980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KLEDGPKFLK_	ENSG00000156508|ENST00000309268|EEF1A1;ENST00000417549.1_1_13:28789725-28790031:+|nuORF;ENST00000436459.2_1_9:135895553-135896258:+|nuORF;ENST00000513637.1_1_5:43495177-43495438:-|nuORF;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	27.047317107675042	0.6589519614906109	1				NaN	NaN	0	NaN	3987	3766	7751
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7756	25.689	NaN	3716.7	30	0	2202.2	0.106	+			12149	GAIKVFVNK	9	42	325.87090345203325	974.5908809562998	3	325.87103271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GAIKVFVNK_	ENSG00000131725|ENST00000254029|WDR44;nc|ENSG00000131725|Q5JSH3-2|WDR44;nc|ENSG00000131725|Q5JSH3-4|WDR44;WDR44|p.F898L|1|0.26|ENSG00000131725|chrX:118448939-118448939|C/A|missense_variant	45.9519527083369	0.35044536499095585	1				NaN	NaN	0	NaN	3988	3766	7751
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7757	25.691	NaN	1905.2	30	0	285.39	0.036	+			1094	AELESKTNTL	10	57	553.2906505317101	1104.56674813022	2	553.2913818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AELESKTNTL_	CEP55|p.D247Ifs*9|1|0.25|ENSG00000138180|chr10:93516987-93516987|A/-|frameshift_variant;ENSG00000138180|ENST00000371485|CEP55;nc|ENSG00000138180|Q53EZ4-2|CEP55	82.7504851949679	0.1731497355276012	1				NaN	NaN	0	NaN	3989	3766	7751
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7766	25.713	NaN	4862.9	30	0	1275.9	0.215	+			5788	AVGVPIKVK	9	57	455.8077258776841	909.6008988221682	2	455.8074951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVGVPIKVK_	ENSG00000129003|ENST00000644861|VPS13C;nc|ENSG00000129003|Q709C8-2|VPS13C;nc|ENSG00000129003|Q709C8-3|VPS13C;nc|ENSG00000129003|Q709C8-4|VPS13C;VPS13C|p.E2463Nfs*18|1|0.25|ENSG00000129003|chr15:61920157-61920157|C/-|frameshift_variant;VPS13C|p.N3163Sfs*6|1|0.05|ENSG00000129003|chr15:61882732-61882733|-/TTATCATCAC|frameshift_variant;VPS13C|p.P3597Lfs*3|1|0.26|ENSG00000129003|chr15:61868732-61868732|G/-|frameshift_variant	57.81127852772723	0.2318599694398087	1				NaN	NaN	0	NaN	3995	3769	7765
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7767	25.717	NaN	4153	30	0	349.14	0.106	+			4660	ATLQNVLRK	9	67	521.8222373976639	1041.6299218621277	2	521.822509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATLQNVLRK_	ENSG00000108424|ENST00000290158|KPNB1;nc|ENSG00000108424|Q14974-2|KPNB1	109.47833844074708	0.029530294723441826	1				NaN	NaN	0	NaN	3996	3769	7765
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7768	25.719	NaN	4322.4	30	0	803.91	0.106			+	25271	LNQGSEGGSPL	11	64	529.7596574376096	1057.504761942019	2	529.7597045898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LNQGSEGGSPL_	REV__nc|ENSG00000088827|Q9BZZ2-3|SIGLEC1	53.08895987439943	0.38514566451266113	1				NaN	NaN	0	NaN	3997	3769	7765
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7769	25.72	NaN	3682.7	30	0	677.32	0.106	+			50092	WGLVVQCVA	9	56	487.7610331473071	NaN	0	487.76104736328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_WGLVVQCVA_	ENST00000327827.11_1_16:9212523-9212682:+|nuORF	68.484700416344	0.11313159791952428	1				NaN	NaN	0	NaN	3998	3769	7765
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7770	25.722	NaN	3358.1	30	0	433.83	0.106	+			47624	VSALALDGSSS	11	58	503.7562632654009	1005.4979735976018	2	503.7563781738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSALALDGSSS_	ENSG00000161996|ENST00000293879|WDR90;ENST00000420061.6_1_16:699416-706047:+|nuORF;ENST00000549648.5_1_16:699416-706047:+|nuORF;ENST00000552943.5_1_16:699416-703842:+|nuORF;nc|ENSG00000161996|Q96KV7-3|WDR90;nc|ENSG00000161996|Q96KV7-5|WDR90;WDR90|p.A1071Pfs*40|1|0.36|ENSG00000161996|chr16:660080-660080|G/-|frameshift_variant;WDR90|p.P1013Qfs*98|1|0.36|ENSG00000161996|chr16:659106-659106|C/-|frameshift_variant	45.97224482568171	0.4762245054624163	1				NaN	NaN	0	NaN	3999	3769	7765
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7771	25.724	NaN	1049.4	30	0	225.8	0.106			+	12380	GDVKNLIK	8	45	443.77124559833055	NaN	0	443.77117919921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GDVKNLIK_	REV__tr|U7T735|U7T735_FUSNUPhageterminaselargesubunitOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00101PE=3SV=1	60.97194046774394	1.7418937515398478	1				NaN	NaN	0	NaN	4000	3769	7765
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7772	25.726	NaN	1752.7	30	0	316.08	0.034				-1	MAAGAAEAAV	10	53	460.21302202091255	918.4114911086251	2	460.2124938964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))M(Oxidation (M))AAGAAEAAV_	ENSG00000108010|ENST00000331244|GLRX3	35.61828744233558	0.588957954432594	1				NaN	NaN	0	NaN	4001	3769	7765
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7783	25.75	NaN	2237.7	30	0	316.06	0.214	+			27780	MRQCPLLG	8	57	459.2370910644531	NaN	0	459.2370910644531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MRQCPLLG_	sp|F5HC71|IL10H_HCMVMViralinterleukin-10homologOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL111APE=3SV=1;sp|P17150|IL10H_HCMVAViralinterleukin-10homologOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL111APE=1SV=2	35.200714571348534	1.7418937515398478	1				NaN	NaN	0	NaN	4009	3772	7782
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7784	25.754	NaN	6461.8	30	0	1346.9	0.106			+	9002	EGAAGRPAPRT	11	62	361.5270325950637	1081.559268385391	3	361.52703857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EGAAGRPAPRT_	REV__ENST00000456291.1_3_9:123638279-123638699:-|nuORF	28.5767321226876	0.690044582712672	1				NaN	NaN	0	NaN	4010	3772	7782
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7785	25.756	NaN	1219.4	30	0	221.78	0.106			+	14793	GTLAYRKR	8	40	322.1937917322342	NaN	0	322.19366455078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTLAYRKR_	REV__ENSG00000102996|ENST00000219271|MMP15;REV__ENSG00000156103|ENST00000286614|MMP16;REV__ENST00000520568.1_1_8:89198619-89339435:-|nuORF;REV__MMP16|p.K540Tfs*9|1|0.03|ENSG00000156103|chr8:88041666-88041667|-/G|frameshift_variant;REV__nc|ENSG00000156103|P51512-2|MMP16	15.641811463095205	1.7418937515398478	1				NaN	NaN	0	NaN	4011	3772	7782
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7786	25.757	NaN	932.61	30	0	116.47	0.106			+	43719	TKSMEPPIEL	10	43	572.8021240234375	NaN	0	572.8021240234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TKSMEPPIEL_	REV__ENST00000553027.1_1_12:49318129-49318267:-|nuORF	31.634271133179894	0.39630454568332174	1				NaN	NaN	0	NaN	4012	3772	7782
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7787	25.759	NaN	1352.7	30	0	215.28	0.106			+	-1	AEGREIQAMIK	11	45	631.3339233398438	NaN	0	631.3339233398438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_AEGREIQAM(Oxidation (M))IK_	REV__ENSG00000102038|ENST00000371121|SMARCA1;REV__ENSG00000153147|ENST00000283131|SMARCA5;REV__nc|ENSG00000102038|P28370-2|SMARCA1;REV__nc|ENSG00000102038|P28370|SMARCA1	27.047317107675042	0.44487757903053116	1				NaN	NaN	0	NaN	4013	3772	7782
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7788	25.761	NaN	1887.1	30	0	135.05	0.038	+			5896	AVLDEAKNINK	11	64	607.8416748046875	NaN	0	607.8416748046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AVLDEAKNINK_	ENSG00000155980|ENST00000455537|KIF5A;ENSG00000168280|ENST00000435030|KIF5C;ENSG00000170759|ENST00000302418|KIF5B;KIF5B|p.M622Wfs*8|1|0.15|ENSG00000170759|chr10:32022898-32022898|T/-|frameshift_variant;KIF5C|p.S816Vfs*68|1|0.35|ENSG00000168280|chr2:149005459-149005459|A/-|frameshift_variant;nc|ENSG00000168280|O60282-2|KIF5C	86.88156770896713	0.048804896711310136	1				NaN	NaN	0	NaN	4014	3772	7782
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7796	25.874	NaN	10390	30	0	1279	0.214	+			40401	STVGAGAYAYK	11	71	544.2744396640196	1086.5343263948391	2	544.275146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STVGAGAYAYK_	ENSG00000156709|ENST00000287295|AIFM1;nc|ENSG00000156709|O95831-4|AIFM1	180.86945649972546	7.603519634083739E-06	1				NaN	NaN	0	NaN	4019	3775	7795
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7797	25.878	NaN	4919.2	30	0	943.59	0.106	+			34761	RYGDGGSTF	9	50	480.21422217995905	958.4138914267181	2	480.2142333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RYGDGGSTF_	ENSG00000169045|ENST00000393432|HNRNPH1;ENST00000502904.5_1_5:179043989-179045371:-|nuORF;ENST00000515481.5_1_5:179044503-179045371:-|nuORF	66.42927471994793	0.16001998865088202	1				NaN	NaN	0	NaN	4020	3775	7795
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7798	25.88	NaN	3244.6	30	0	418.78	0.106			+	23569	LALLEVIH	8	43	454.2841350830373	906.5537172328746	2	454.2840576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LALLEVIH_	REV__ENSG00000145147|ENST00000504154|SLIT2;REV__nc|ENSG00000145147|O94813-2|SLIT2;REV__nc|ENSG00000145147|O94813-3|SLIT2	39.021493756699265	0.6623843612266921	1				NaN	NaN	0	NaN	4021	3775	7795
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7799	25.882	NaN	2058.6	30	0	355.22	0.106	+			43074	TELTTKSSL	9	53	490.2688950181689	978.5232371031378	2	490.268798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TELTTKSSL_	ENSG00000133606|ENST00000255977|MKRN1;ENST00000475010.5_1_7:140155450-140179030:-|nuORF;nc|ENSG00000133606|Q9UHC7-2|MKRN1;nc|ENSG00000133606|Q9UHC7-3|MKRN1;nc|ENSG00000133606|Q9UHC7-4|MKRN1;nc|ENSG00000238222|Q13434|MKRN4P	70.8162118820467	0.13725933411854815	1				NaN	NaN	0	NaN	4022	3775	7795
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7800	25.884	NaN	3186.1	30	0	265.89	0.106	+			42866	TEGQVVNKL	9	56	494.2768962731205	986.539239613041	2	494.27685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TEGQVVNKL_	ENSG00000183963|ENST00000333137|SMTN;ENST00000460658.5_1_22:31484094-31491444:+|nuORF;ENST00000489337.5_1_22:31484532-31494796:+|nuORF;nc|ENSG00000183963|P53814-6|SMTN;nc|ENSG00000183963|P53814|SMTN;SMTN|p.A318Pfs*39|1|0.29|ENSG00000183963|chr22:31090967-31090967|C/-|frameshift_variant;SMTN|p.G455Afs*3|1|0.38|ENSG00000183963|chr22:31091383-31091383|G/-|frameshift_variant;SMTN|p.L317Pfs*24|1|0.4|ENSG00000183963|chr22:31090966-31090967|-/C|frameshift_variant;SMTN|p.S536Vfs*33|1|0.33|ENSG00000183963|chr22:31091813-31091813|C/-|frameshift_variant	112.41091882917199	0.026537921851008135	1				NaN	NaN	0	NaN	4023	3775	7795
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7801	25.885	NaN	3183.5	30	0	929.62	0.106			+	29242	NWPIKQKRGL	10	62	620.3689542303689	1238.7233555275377	2	620.369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NWPIKQKRGL_	REV__ENSG00000181804|ENST00000316549|SLC9A9	33.921630207806714	0.6028135429846169	1				NaN	NaN	0	NaN	4024	3775	7795
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7802	25.887	NaN	3585.2	30	0	445.13	0.036	+			16881	HPHGLQVTY	9	59	526.2687333529119	1050.5229137726237	2	526.2703247070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HPHGLQVTY_	chr7:900613-904126|469|13.6|0.0|20.38|-|ENST00000649206|ADAP1,COX19;ENSG00000105963|ENST00000265846|ADAP1;ENST00000478000.5_1_7:938560-944975:-|nuORF;ENST00000481406.1_1_7:943651-944759:-|nuORF;nc|ENSG00000105963|O75689-2|ADAP1;nc|ENSG00000105963|O75689-3|ADAP1	64.20726635412375	0.17854274437659667	1				NaN	NaN	0	NaN	4025	3775	7795
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7813	25.914	NaN	3424.7	30	0	514.97	0.214			+	35736	SDRPQVQP	8	50	463.73821599116343	925.4618790491269	2	463.7379150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SDRPQVQP_	REV__ENST00000339431.8_1_7:102553532-102574274:+|nuORF	40.5726180659479	0.6527593143185008	1				NaN	NaN	0	NaN	4033	3778	7812
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7814	25.917	NaN	6275.5	30	0	3889.8	0.106	+			8796	EEKKIKVIL	9	40	367.2409820479912	1098.7011167441738	3	367.240966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EEKKIKVIL_	ENSG00000162434|ENST00000342505|JAK1;JAK1|p.K860Nfs*16|3|0.29|ENSG00000162434|chr1:64841314-64841314|T/-|frameshift_variant	17.364965105453717	0.6112419832031293	1				NaN	NaN	0	NaN	4034	3778	7812
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7815	25.919	NaN	2202.6	30	0	582.9	0.106			+	29517	PDSAETERL	9	57	509.24603202463385	1016.4775111160677	2	509.24566650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PDSAETERL_	REV__nc|ENSG00000142765|Q8IYJ3-2|SYTL1	62.107414245175825	0.1960472003779324	1				NaN	NaN	0	NaN	4035	3778	7812
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7816	25.921	NaN	2100.2	30	0	309.7	0.106			+	3374	ASPKLELHL	9	40	336.5342043308375	1006.5807835927126	3	336.5342712402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASPKLELHL_	REV__ADAMTS18|p.R651Gfs*51|1|0.31|ENSG00000140873|chr16:77325948-77325948|A/-|frameshift_variant;REV__ENSG00000140873|ENST00000282849|ADAMTS18;REV__nc|ENSG00000140873|Q8TE60-2|ADAMTS18	20.481830146152948	0.6112419832031293	1				NaN	NaN	0	NaN	4036	3778	7812
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7817	25.923	NaN	1724.5	30	0	208.39	0.106	+			31063	QEYIGRSV	8	57	476.24748037779796	950.4804078223959	2	476.2442321777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QEYIGRSV_	ENSG00000185304|ENST00000398146|RGPD2;ENSG00000187627|ENST00000641458|RGPD1;nc|ENSG00000187627|P0DJD0|RGPD1;RGPD2|p.F1350Lfs*25|1|0.25|ENSG00000185304|chr2:87782974-87782974|A/-|frameshift_variant	39.252832667884924	0.6609488554722044	1				NaN	NaN	0	NaN	4037	3778	7812
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7818	25.925	NaN	1592.5	30	0	393.04	0.106				-1	IAVMGASRA	9	50	446.23810224924716	NaN	0	446.2380065917969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_IAVM(Oxidation (M))GASRA_	ENSG00000224109|ENST00000417339|CENPVL3	35.61828744233558	0.29773779453147337	1				NaN	NaN	0	NaN	4038	3778	7812
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7819	25.926	NaN	4004.7	30	0	872.17	0.037			+	28900	NQLFSKLQL	9	43	364.213257114021	1089.617941942263	3	364.21343994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NQLFSKLQL_	REV__ENST00000450536.6_1_6:139262591-139264710:-|nuORF	27.882242232435846	0.5426732730940306	1				NaN	NaN	0	NaN	4039	3778	7812
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7830	25.953	NaN	3670.4	30	0	753.89	0.215	+			26567	LTTAVITNK	9	59	480.7893150215178	959.5640771098356	2	480.7895812988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LTTAVITNK_	ENSG00000104408|ENST00000220849|EIF3E	56.43379154798735	0.2433427591689151	1				NaN	NaN	0	NaN	4047	3781	7829
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7831	25.956	NaN	1478.8	30	0	244.11	0.106	+			12162	GAKVLERKLQ	10	64	571.3558065725266	1140.697060211853	2	571.3567504882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GAKVLERKLQ_	ENST00000381340.7_1_12:26985723-26986077:-|nuORF	54.776311868738084	0.41334902933431344	1				NaN	NaN	0	NaN	4048	3781	7829
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7832	25.958	NaN	1665.7	30	0	724.7	0.106			+	24663	LGVGALRCIIK	11	43	381.5744302484054	NaN	0	381.2398681640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LGVGALRCIIK_	REV__ENST00000559934.5_1_15:78834413-78834578:+|nuORF;REV__ENST00000560099.5_1_15:78834413-78836557:+|nuORF	37.50817390946774	0.39825797133360086	1				NaN	NaN	0	NaN	4049	3781	7829
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7833	25.96	NaN	1536.4	30	0	246.38	0.106	+			50158	WKPLAEDSP	9	44	521.7652432670073	1041.5159336008146	2	521.762451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_WKPLAEDSP_	ENSG00000060642|ENST00000674202|PIGV	25.57405402267927	0.5642445186134241	1				NaN	NaN	0	NaN	4050	3781	7829
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7834	25.962	NaN	2057.9	30	0	409.59	0.106			+	8711	EEDPRWKL	8	51	536.7734058428239	1071.5322587524477	2	536.7726440429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EEDPRWKL_	REV__ENSG00000116747|ENST00000400968|RO60;REV__nc|ENSG00000116747|P10155-3|RO60;REV__nc|ENSG00000116747|P10155-4|RO60;REV__nc|ENSG00000116747|P10155-5|RO60	42.396135135203025	0.6414440140393314	1				NaN	NaN	0	NaN	4051	3781	7829
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7835	25.964	NaN	1520.6	30	0	225.65	0.106	+			45751	VAEENTRVL	9	58	515.779735980901	1029.544919028602	2	515.7805786132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VAEENTRVL_	ENSG00000156256|ENST00000399976|USP16;ENST00000485067.1_1_21:30426080-30426505:+|nuORF;nc|ENSG00000156256|Q9Y5T5-2|USP16;nc|ENSG00000156256|Q9Y5T5-3|USP16;nc|ENSG00000156256|Q9Y5T5-4|USP16	44.377184641726394	0.36891676396732553	1				NaN	NaN	0	NaN	4052	3781	7829
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7836	25.966	NaN	2212.3	30	0	428.13	0.036	+			45064	TVHITGFGAL	10	44	339.19041125072636	1014.549404352379	3	339.1903991699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TVHITGFGAL_	ENSG00000187054|ENST00000508048|TMPRSS11A;nc|ENSG00000187054|Q6ZMR5-1|TMPRSS11A	25.450171626174864	0.6719948968573018	1				NaN	NaN	0	NaN	4053	3781	7829
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7843	25.984	NaN	2236.8	30	0	430.25	0.214	+			3977	ATATVAALQEK	11	49	551.8090297605422	NaN	0	551.8099365234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATATVAALQEK_	ENSG00000122515|ENST00000309315|ZMIZ2;nc|ENSG00000122515|Q8NF64-2|ZMIZ2;nc|ENSG00000122515|Q8NF64-3|ZMIZ2	55.08391021199286	0.27880418946526786	1				NaN	NaN	0	NaN	4057	3784	7842
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7844	25.988	NaN	2549.3	30	0	271.34	0.106	+			42022	SVYVLVRQK	9	64	546.3319306141925	1090.649308295185	2	546.3323364257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVYVLVRQK_	ENSG00000197601|ENST00000354817|FAR1	63.53385203322761	0.18415635464017938	1				NaN	NaN	0	NaN	4058	3784	7842
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7845	25.99	NaN	1767.4	30	0	303.36	0.106				-1	CGSSCCSCCW	10	47	384.7720138288134	NaN	0	384.7720031738281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_CGSSC(Carbamidomethyl (C))C(Carbamidomethyl (C))SCCW_	ENST00000228741.7_1_12:96588285-96617411:+|nuORF	1.8869224993972666	0.4201028297492154	1				NaN	NaN	0	NaN	4059	3784	7842
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7846	25.991	NaN	1422	30	0	159.3	0.034	+			7204	DAINAETVL	9	46	473.24773722007785	NaN	0	473.2480773925781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DAINAETVL_	ENSG00000166634|ENST00000382768|SERPINB12;nc|ENSG00000166634|Q96P63|SERPINB12;SERPINB12|p.S253Pfs*12|1|0.07|ENSG00000166634|chr18:63565555-63565556|-/CCAA|frameshift_variant	37.81151784470057	0.28666463014928195	1				NaN	NaN	0	NaN	4060	3784	7842
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7853	26.01	NaN	2637.8	30	0	335.6	0.214			+	28891	NQIAVLHTY	9	65	529.7861707455123	1057.5577885578246	2	529.7872314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NQIAVLHTY_	REV__ENSG00000007908|ENST00000333360|SELE;REV__SELE|p.T415Qfs*14|1|0.31|ENSG00000007908|chr1:169728095-169728095|G/-|frameshift_variant	45.9519527083369	0.35044536499095585	1				NaN	NaN	0	NaN	4064	3787	7852
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7854	26.014	NaN	2425	30	0	526.16	0.106	+			15486	GVAGSGLLK	9	60	401.2449976550468	800.4754423768936	2	401.2452697753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GVAGSGLLK_	ENST00000276569.7_1_8:66539639-66546356:-|nuORF;ENST00000519352.1_1_8:66545221-66546356:-|nuORF	74.25504064058377	0.12238981753128622	1				NaN	NaN	0	NaN	4065	3787	7852
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7855	26.016	NaN	1743.5	30	0	250.46	0.106	+			45471	TYDGNHDTF	9	55	535.2143505405314	1068.4141481478628	2	535.2152099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TYDGNHDTF_	ENSG00000105438|ENST00000330720|KDELR1;ENSG00000136240|ENST00000258739|KDELR2;ENST00000599084.1_1_19:48892794-48894615:-|nuORF;nc|ENSG00000105438|P24390-2|KDELR1;nc|ENSG00000136240|P33947-2|KDELR2	64.20726635412375	0.17854274437659667	1				NaN	NaN	0	NaN	4066	3787	7852
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7856	26.018	NaN	755.25	30	0	68.698	0.106	+			43796	TLLLGANAAG	10	38	450.76075842558873	NaN	0	450.7606506347656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TLLLGANAAG_	ENSG00000221944|ENST00000408957|TIGD1	45.97224482568171	0.33106653400957564	1				NaN	NaN	0	NaN	4067	3787	7852
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7857	26.019	NaN	1893.7	30	0	528.87	0.037	+			19619	KDHSSGNPGQQ	11	51	577.7620059300797	1153.5094589269593	2	577.7620849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KDHSSGNPGQQ_	nc|ENSG00000157654|Q9Y2D5-8|PALM2AKAP2;nc|ENSG00000157654|Q9Y2D5-9|PALM2AKAP2	19.262678746197807	0.7802940895261122	1				NaN	NaN	0	NaN	4068	3787	7852
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7864	26.038	NaN	3334.1	30	0	540.04	0.214			+	13154	GGQLLHAVTY	10	68	529.7861707455123	1057.5577885578246	2	529.7871704101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GGQLLHAVTY_	REV__ENSG00000133706|ENST00000394434|LARS1;REV__ENST00000508667.5_1_5:145522961-145531505:-|nuORF;REV__ENST00000512412.1_1_5:145519224-145523084:-|nuORF;REV__ENST00000514104.5_1_5:145522433-145523105:-|nuORF;REV__nc|ENSG00000133706|Q9P2J5-2|LARS1	66.42927471994793	0.3073667423445326	1				NaN	NaN	0	NaN	4072	3790	7863
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7865	26.042	NaN	2078.4	30	0	676.99	0.106				-1	 	0	40	327.7378730423898	653.4611931515797	2	327.7378845214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	4073	3790	7863
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7866	26.044	NaN	2219.9	30	0	224.11	0.106	+			19178	IYTKLNQKI	9	57	560.8393875532847	1119.6642221733694	2	560.8404541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IYTKLNQKI_	ENSG00000138190|ENST00000260762|EXOC6;EXOC6|p.L640Ffs*39|1|0.37|ENSG00000138190|chr10:92974192-92974193|-/T|frameshift_variant;nc|ENSG00000138190|Q8TAG9-2|EXOC6	66.96192283764107	0.15557981141143568	1				NaN	NaN	0	NaN	4074	3790	7863
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7867	26.046	NaN	2473.4	30	0	778.17	0.106	+			49746	VYPARTQTL	9	56	524.7927582232082	1047.5709635132164	2	524.7926025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VYPARTQTL_	ENSG00000198502|ENST00000374975|HLA-DRB5	31.529811441608018	0.5085848003137583	1				NaN	NaN	0	NaN	4075	3790	7863
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7868	26.047	NaN	1524.9	30	0	204.6	0.034			+	35116	SAGRYIPR	8	47	460.25809654706785	918.5016401609357	2	460.2581481933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SAGRYIPR_	REV__ENSG00000089101|ENST00000245957|CFAP61;REV__nc|ENSG00000089101|Q8NHU2-3|CFAP61	42.47446043378293	0.6409579893742323	1				NaN	NaN	0	NaN	4076	3790	7863
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7876	26.066	NaN	1221.7	30	0	280.74	0.214			+	49028	VVGVTQALP	9	43	442.2658421727322	882.5171314122645	2	442.265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVGVTQALP_	REV__ENSG00000011426|ENST00000265748|ANLN;REV__nc|ENSG00000011426|Q9NQW6-2|ANLN	45.9519527083369	0.35044536499095585	1				NaN	NaN	0	NaN	4081	3793	7875
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7877	26.07	NaN	1936.5	30	0	453.6	0.106			+	50547	YARTAGSLPG	10	50	496.76137127046536	991.5081896077307	2	496.7611999511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YARTAGSLPG_	REV__ENST00000382247.5_1_4:17806795-17812118:-|nuORF	37.81151784470057	0.569310847604193	1				NaN	NaN	0	NaN	4082	3793	7875
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7878	26.072	NaN	1347	30	0	241.84	0.106	+			47124	VLPAFRESP	9	55	508.28225475358516	1014.5499565739703	2	508.2823791503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VLPAFRESP_	ENSG00000197555|ENST00000381232|SIPA1L1;nc|ENSG00000197555|O43166-3|SIPA1L1;nc|ENSG00000197555|O43166|SIPA1L1	30.503639358989545	0.5181749237905803	1				NaN	NaN	0	NaN	4083	3793	7875
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7879	26.074	NaN	1202.6	30	0	213.6	0.035	+			2197	ALPPALLTALG	11	38	518.8237589619199	NaN	0	518.8234252929688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ALPPALLTALG_	ENSG00000112941|ENST00000230859|TENT4A	26.69291269510374	0.4464570093767436	1				NaN	NaN	0	NaN	4084	3793	7875
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7885	26.09	NaN	5187.1	30	0	822.65	0.214	+			19952	KEGEEQPVL	9	61	514.7669226007588	1027.5192922683175	2	514.7667846679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEGEEQPVL_	ENSG00000104517|ENST00000520539|UBR5;nc|ENSG00000104517|O95071-2|UBR5;UBR5|p.F2571Lfs*4|2|0.31|ENSG00000104517|chr8:102262044-102262044|A/-|frameshift_variant	56.43379154798735	0.2433427591689151	1				NaN	NaN	0	NaN	4087	3796	7884
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7886	26.094	NaN	4501.1	30	0	579.02	0.106			+	9913	EQREQHEDNF	10	72	666.2834041366547	1330.5522553401092	2	666.2833862304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EQREQHEDNF_	REV__ENSG00000157741|ENST00000473989|UBN2;REV__nc|ENSG00000157741|Q6ZU65-2|UBN2;REV__UBN2|p.G1191Efs*28|1|0.17|ENSG00000157741|chr7:139284473-139284473|G/-|frameshift_variant;REV__UBN2|p.K314Rfs*11|1|0.15|ENSG00000157741|chr7:139261281-139261281|A/-|frameshift_variant;REV__UBN2|p.K315Efs*5|1|0.25|ENSG00000157741|chr7:139261280-139261281|-/A|frameshift_variant;REV__UBN2|p.K542Nfs*2|1|0.14|ENSG00000157741|chr7:139272347-139272347|A/-|frameshift_variant;REV__UBN2|p.L543Tfs*6|1|0.38|ENSG00000157741|chr7:139272346-139272347|-/A|frameshift_variant;REV__UBN2|p.S988Hfs*27|1|0.18|ENSG00000157741|chr7:139283862-139283862|C/-|frameshift_variant	54.722347961057174	0.4138398245444204	1				NaN	NaN	0	NaN	4088	3796	7884
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7887	26.096	NaN	1483	30	0	112.88	0.035			+	37582	SLNQGYSLV	9	50	490.7558201088261	979.4970872844522	2	490.7551574707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLNQGYSLV_	REV__ENSG00000135862|ENST00000258341|LAMC1;REV__LAMC1|p.T1225Kfs*5|1|0.07|ENSG00000135862|chr1:183132506-183132507|-/AAAT|frameshift_variant	51.19269402634007	0.2889735674168909	1				NaN	NaN	0	NaN	4089	3796	7884
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7897	26.118	NaN	2755.3	30	0	857.47	0.214	+			27234	MELDRWGS	8	55	497.2276512407624	992.4407495483248	2	497.2279052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MELDRWGS_	ENST00000577783.2_1_17:77079170-77080166:+|nuORF	73.97473282117947	0.3737790450121076	1				NaN	NaN	0	NaN	4096	3799	7896
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7898	26.121	NaN	3170.9	30	0	376.55	0.106	+			14289	GSVYITLKK	9	61	504.80787685833377	1007.6012007834676	2	504.80712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSVYITLKK_	ENSG00000140319|ENST00000267884|SRP14;ENST00000558243.1_1_15:40330963-40331317:-|nuORF;ENST00000558527.5_1_15:40329525-40331317:-|nuORF;ENST00000559475.5_1_15:40329218-40331146:-|nuORF	120.30596017624542	0.02101454110788768	1				NaN	NaN	0	NaN	4097	3799	7896
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7899	26.123	NaN	3264.3	30	0	426.39	0.036	+			28351	NEKETMQSL	9	62	540.2556361338944	1078.4967193345888	2	540.2554931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NEKETMQSL_	CON__Q497I4;CON__Q92764;ENSG00000111057|ENST00000388835|KRT18;ENSG00000197079|ENST00000246639|KRT35;ENST00000402024.2_1_6:116779363-116779789:-|nuORF;ENST00000520711.1_1_8:41368829-41369321:+|nuORF;ENST00000549078.5_1_12:53342924-53344195:+|nuORF;ENST00000577198.5_1_17:26603697-26633156:-|nuORF;ENST00000585825.1_1_17:58887571-58888051:+|nuORF	112.10723106719422	0.02684780151337622	1				NaN	NaN	0	NaN	4098	3799	7896
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7906	26.141	NaN	1639.2	30	0	227.63	0.214	+			27306	MGSSIGYHT	9	49	476.7119085930404	951.4092642528808	2	476.7117919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MGSSIGYHT_	ENSG00000091009|ENST00000265271|RBM27;RBM27|p.K816Tfs*63|2|0.2|ENSG00000091009|chr5:146267757-146267758|AA/-|frameshift_variant	30.503639358989545	0.5181749237905803	1				NaN	NaN	0	NaN	4102	3802	7905
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7907	26.145	NaN	1438.5	30	0	203.25	0.106	+			21363	KMCTSTCSLK	10	48	587.7646225595562	1173.5146921859123	2	587.765380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_KM(Oxidation (M))CTSTC(Carbamidomethyl (C))SLK_	ENST00000416202.5_1_22:46452795-46453064:+|nuORF	40.05817265558897	0.5486090488315611	1				NaN	NaN	0	NaN	4103	3802	7905
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7908	26.147	NaN	1089.5	30	0	114.9	0.039			+	-1	DRLFKCLGRV	10	42	632.3525139171263	1262.6904749010525	2	632.3524780273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_DRLFKC(Carbamidomethyl (C))LGRV_	REV__CSE1L|p.F397Lfs*5|1|0.27|ENSG00000124207|chr20:49075371-49075371|T/-|frameshift_variant	17.468008924990375	0.7276870902328821	1				NaN	NaN	0	NaN	4104	3802	7905
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7916	26.167	NaN	29812	30	0	8283.9	0.214	+			14553	GTFGGLGSK	9	56	412.2189785526013	822.4234041720026	2	412.21881103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTFGGLGSK_	ENSG00000124942|ENST00000378024|AHNAK	129.42129120953632	0.01549634589885217	1				NaN	NaN	0	NaN	4109	3805	7915
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7917	26.17	NaN	2496.1	30	0	699.56	0.106	+			5234	ATVAEKTK	8	45	424.2478212510501	846.4810895689002	2	424.2474670410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATVAEKTK_	ENSG00000145335|ENST00000394991|SNCA;nc|ENSG00000145335|P37840-2|SNCA;SNCA|p.G51V|1|0.05|ENSG00000145335|chr4:89828154-89828154|C/A|missense_variant	27.882242232435846	0.7440473649773525	1				NaN	NaN	0	NaN	4110	3805	7915
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7918	26.172	NaN	1653.8	30	0	401.7	0.106	+			6301	AVSTLGISK	9	39	438.2632547823444	874.5119566314888	2	438.2629699707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVSTLGISK_	ENSG00000103160|ENST00000219439|HSDL1;nc|ENSG00000103160|Q3SXM5-2|HSDL1	67.49366992349736	0.1516260258713357	1				NaN	NaN	0	NaN	4111	3805	7915
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7919	26.174	NaN	1144.1	30	0	290.34	0.106			+	-1	TIRSNCMAR	9	32	562.7705755823972	1123.5265982315943	2	562.7703247070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_TIRSNC(Carbamidomethyl (C))M(Oxidation (M))AR_	REV__ENST00000564079.5_1_15:43668383-43669260:+|nuORF	23.04248740728303	0.5879033540491928	1				NaN	NaN	0	NaN	4112	3805	7915
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7920	26.176	NaN	1911.6	30	0	317.53	0.106	+			28821	NPLQKDPQY	9	60	551.7795647066635	1101.5445764801268	2	551.7803955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NPLQKDPQY_	ENSG00000115685|ENST00000234038|PPP1R7;nc|ENSG00000115685|Q15435-2|PPP1R7;PPP1R7|p.R330W|1|0.49|ENSG00000115685|chr2:241182728-241182728|C/T|missense_variant	120.30596017624542	0.02101454110788768	1				NaN	NaN	0	NaN	4113	3805	7915
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7921	26.178	NaN	2793.4	30	0	550.55	0.106	+			5278	ATVGKATGFLK	11	68	546.8248882760984	1091.6352236189966	2	546.82666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATVGKATGFLK_	ACLY|p.G297Vfs*31|1|0.32|ENSG00000131473|chr17:41905635-41905635|C/-|frameshift_variant;ENSG00000131473|ENST00000352035|ACLY;nc|ENSG00000131473|P53396-2|ACLY	66.32627574692302	0.2669844048574283	1				NaN	NaN	0	NaN	4114	3805	7915
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7922	26.18	NaN	4043.4	30	0	431.52	0.037	+			33002	REFGANDNMGA	11	59	591.2537439101436	1180.4929348870871	2	591.2533569335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_REFGANDNMGA_	ENSG00000162896|ENST00000356495|PIGR	42.33807565288922	0.5259510355945483	1				NaN	NaN	0	NaN	4115	3805	7915
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7930	26.198	NaN	4737.7	30	0	750.66	0.214	+			14583	GTFVGVHVR	9	50	486.2744199354822	970.5342869377644	2	486.27471923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTFVGVHVR_	ENSG00000176920|ENST00000425340|FUT2	74.25504064058377	0.12238981753128622	1				NaN	NaN	0	NaN	4120	3808	7929
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7931	26.201	NaN	3877.7	30	0	405.38	0.106	+			32649	RAADVEPSSPK	11	60	578.8011656904023	1155.5877784476045	2	578.801513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RAADVEPSSPK_	ENSG00000198064|ENST00000697092|NPIPB13	72.87924865735499	0.21173632944124365	1				NaN	NaN	0	NaN	4121	3808	7929
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7932	26.203	NaN	1908.3	30	0	316.93	0.106	+			14660	GTIDVKELK	9	51	501.7949861368296	1001.5754193404592	2	501.7951965332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTIDVKELK_	ENSG00000147400|ENST00000370277|CETN2	82.7504851949679	0.08565546331141553	1				NaN	NaN	0	NaN	4122	3808	7929
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7933	26.205	NaN	1679.9	30	0	191.49	0.106				-1	ACLLGGSK	8	49	403.2138020437251	804.4130511542502	2	403.2143249511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_AC(Carbamidomethyl (C))LLGGSK_	ENSG00000197081|ENST00000356956|IGF2R;IGF2R|p.D2163Tfs*2|1|0.16|ENSG00000197081|chr6:160089932-160089932|G/-|frameshift_variant;IGF2R|p.G2426Efs*10|1|0.25|ENSG00000197081|chr6:160104882-160104882|G/-|frameshift_variant;IGF2R|p.V1435M|1|0.07|ENSG00000197081|chr6:160069918-160069918|G/A|missense_variant	50.0245360154114	0.5941082100236891	1				NaN	NaN	0	NaN	4123	3808	7929
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7934	26.207	NaN	2384.6	30	0	574.1	0.106				-1	 	0	50	344.2247170241637	686.4348811151274	2	344.22479248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	4124	3808	7929
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7935	26.209	NaN	1396.6	30	0	133.55	0.033			+	47071	VLIEEGET	8	44	445.2294267648947	888.4443005965894	2	445.2303466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VLIEEGET_	REV__ENSG00000198399|ENST00000355123|ITSN2;REV__ITSN2|p.A1240Pfs*15|1|0.05|ENSG00000198399|chr2:24217995-24217996|-/AAGGG|frameshift_variant;REV__ITSN2|p.A1583Pfs*86|1|0.25|ENSG00000198399|chr2:24205230-24205230|T/-|frameshift_variant;REV__ITSN2|p.F1478Qfs*12|1|0.3|ENSG00000198399|chr2:24209858-24209859|AA/-|frameshift_variant;REV__nc|ENSG00000198399|Q9NZM3-2|ITSN2;REV__nc|ENSG00000198399|Q9NZM3-3|ITSN2;REV__nc|ENSG00000198399|Q9NZM3-4|ITSN2	33.51558372728122	0.7005509609380386	1				NaN	NaN	0	NaN	4125	3808	7929
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7940	26.223	NaN	2219	30	0	228.64	0.214			+	23564	LALFSTKK	8	47	454.2841350830373	906.5537172328746	2	454.2837829589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LALFSTKK_	REV__ENST00000484368.1_1_1:172362920-172362983:-|nuORF	47.91560031466742	0.6071945918984287	1				NaN	NaN	0	NaN	4127	3811	7939
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7941	26.227	NaN	705.45	30	0	165.16	0.106			+	30247	PSVLIGVE	8	29	407.2400824386786	NaN	0	407.2401428222656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PSVLIGVE_	REV__ENSG00000163376|ENST00000417314|KBTBD8	24.20275056022122	1.7418937515398478	1				NaN	NaN	0	NaN	4128	3811	7939
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7942	26.229	NaN	1842.8	30	0	521.83	0.106	+			26055	LSLPEIVNS	9	36	324.5188031969237	970.5345801909712	3	324.51904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSLPEIVNS_	ENST00000288937.6_1_11:6702876-6703137:-|nuORF	20.94693142431847	0.6074874384046576	1				NaN	NaN	0	NaN	4129	3811	7939
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7943	26.231	NaN	2155.2	30	0	308.43	0.106	+			34042	RSLSDVAQAQ	10	61	537.781569924557	1073.5485869159138	2	537.782958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RSLSDVAQAQ_	ENSG00000115687|ENST00000234040|PASK;ENST00000472072.5_1_2:242045983-242047931:-|nuORF;nc|ENSG00000115687|Q96RG2-2|PASK	32.75053402867276	0.6123771875927935	1				NaN	NaN	0	NaN	4130	3811	7939
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7944	26.233	NaN	1068.3	30	0	135.71	0.035				-1	CTLDPPNLI	9	44	521.7652432670073	1041.5159336008146	2	521.768798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_C(Carbamidomethyl (C))TLDPPNLI_	ENST00000601476.1_1_19:42462288-42463399:-|nuORF	29.14955571784316	0.5308295550522326	1				NaN	NaN	0	NaN	4131	3811	7939
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7956	26.259	NaN	14246	30	0	6120.5	0.214			+	7436	DFETRIDEL	9	61	379.8522453468325	1136.5349066406975	3	379.85247802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DFETRIDEL_	REV__ENSG00000156510|ENST00000354624|HKDC1;REV__ENSG00000156515|ENST00000359426|HK1;REV__ENST00000494253.1_1_10:71098016-71144300:+|nuORF;REV__nc|ENSG00000156510|Q2TB90-2|HKDC1;REV__nc|ENSG00000156510|Q2TB90-3|HKDC1;REV__nc|ENSG00000156515|P19367-2|HK1;REV__nc|ENSG00000156515|P19367-3|HK1;REV__nc|ENSG00000156515|P19367-4|HK1	40.77816245573522	0.41113185337114944	1				NaN	NaN	0	NaN	4140	3814	7955
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7957	26.262	NaN	3653.8	30	0	1312.2	0.106			+	-1	TAETRLPPL	9	51	347.1974442326465	1038.5705032981396	3	347.1976318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))TAETRLPPL_	REV__ENSG00000197114|ENST00000355969|ZGPAT;REV__ENST00000477340.5_1_20:62339420-62365174:+|nuORF;REV__ENST00000478385.5_1_20:62340364-62366220:+|nuORF;REV__nc|ENSG00000197114|Q8N5A5-3|ZGPAT;REV__nc|ENSG00000197114|Q8N5A5|ZGPAT;REV__ZGPAT|p.G264S|1|0.16|ENSG00000197114|chr20:63733658-63733658|G/A|missense_variant	26.79610172149135	0.5528238334041078	1				NaN	NaN	0	NaN	4141	3814	7955
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7958	26.264	NaN	2756.1	30	0	730.1	0.106	+			46740	VGRLILYSS	9	46	336.534146866783	1006.5806112005489	3	336.53411865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VGRLILYSS_	ENSG00000144320|ENST00000272748|LNPK;nc|ENSG00000144320|Q9C0E8-2|LNPK;nc|ENSG00000144320|Q9C0E8-4|LNPK	30.503639358989545	0.5181749237905803	1				NaN	NaN	0	NaN	4142	3814	7955
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7959	26.266	NaN	1777.8	30	0	196.5	0.106			+	-1	ELCKSIIPIVK	11	52	650.3861694335938	NaN	0	650.3861694335938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_ELC(Carbamidomethyl (C))KSIIPIVK_	REV__ENSG00000137942|ENST00000271234|FNBP1L;REV__FNBP1L|p.T313Pfs*3|1|0.22|ENSG00000137942|chr1:93534852-93534852|A/-|frameshift_variant;REV__nc|ENSG00000137942|Q5T0N5-2|FNBP1L;REV__nc|ENSG00000137942|Q5T0N5-3|FNBP1L;REV__nc|ENSG00000137942|Q5T0N5-4|FNBP1L;REV__nc|ENSG00000137942|Q5T0N5-5|FNBP1L	29.170058357718403	0.43541742044178583	1				NaN	NaN	0	NaN	4143	3814	7955
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7960	26.268	NaN	4568.8	30	0	726.46	0.106	+			17623	IEIVGGATRI	10	51	343.5412777502553	1027.602003850966	3	343.8754577636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IEIVGGATRI_	ENSG00000164070|ENST00000296464|HSPA4L;HSPA4L|p.G575Efs*18|1|0.36|ENSG00000164070|chr4:127820470-127820470|A/-|frameshift_variant	36.31764250033197	0.5830761606467809	1				NaN	NaN	0	NaN	4144	3814	7955
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7961	26.27	NaN	1832.4	30	0	621.8	0.036	+			26292	LSVAGGFVALY	11	54	548.8045742988298	1095.5945956644596	2	548.8035278320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSVAGGFVALY_	COL18A1|p.G1307Dfs*17|1|0.45|ENSG00000182871|chr21:45497645-45497645|C/-|frameshift_variant;COL18A1|p.G1307Rfs*9|1|0.65|ENSG00000182871|chr21:45497644-45497645|-/C|frameshift_variant;COL18A1|p.G1357Afs*86|1|0.1|ENSG00000182871|chr21:45504511-45504520|CGGCCCCCCA/-|frameshift_variant;COL18A1|p.G625Efs*10|1|0.36|ENSG00000182871|chr21:45468759-45468759|G/-|frameshift_variant;COL18A1|p.G746Afs*3|1|0.14|ENSG00000182871|chr21:45477470-45477470|G/-|frameshift_variant;COL18A1|p.P1408Qfs*38|1|0.53|ENSG00000182871|chr21:45505238-45505238|C/-|frameshift_variant;COL18A1|p.P1436Lfs*10|1|0.19|ENSG00000182871|chr21:45505402-45505402|C/-|frameshift_variant;COL18A1|p.R608Gfs*27|1|0.21|ENSG00000182871|chr21:45468712-45468712|C/-|frameshift_variant;ENSG00000182871|ENST00000651438|COL18A1;nc|ENSG00000182871|P39060-1|COL18A1;nc|ENSG00000182871|P39060|COL18A1	42.396135135203025	0.5251566046092361	1				NaN	NaN	0	NaN	4145	3814	7955
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7975	26.299	NaN	6735.2	30	0	734.74	0.214			+	51450	YVENDEKQL	9	74	569.274550853785	1136.5345487743698	2	569.2755126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YVENDEKQL_	REV__VNN2|p.E378D|1|0.25|ENSG00000112303|chr6:132751211-132751211|C/A|missense_variant	63.53385203322761	0.18415635464017938	1				NaN	NaN	0	NaN	4156	3817	7974
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7976	26.303	NaN	3527.2	30	0	496.82	0.106	+			42911	TEIEGTQKL	9	60	509.7742753551664	1017.5339977771329	2	509.7742614746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEIEGTQKL_	ENSG00000120899|ENST00000346049|PTK2B;nc|ENSG00000120899|Q14289-2|PTK2B	118.74307786436346	0.02196067127630568	1				NaN	NaN	0	NaN	4157	3817	7974
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7977	26.305	NaN	8238.7	30	0	711.17	0.106	+			24095	LEKKIEQEL	9	74	565.3262719060175	1128.637990878835	2	565.3271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LEKKIEQEL_	CHMP4B|p.E41G|1|0.06|ENSG00000101421|chr20:33811590-33811590|A/G|missense_variant;ENSG00000101421|ENST00000217402|CHMP4B	160.8219353732433	0.004346709298329381	1				NaN	NaN	0	NaN	4158	3817	7974
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7978	26.307	NaN	2385.4	30	0	233.33	0.106				-1	YNICPRGW	8	61	533.2482301247918	NaN	0	533.2481079101562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_YNIC(Carbamidomethyl (C))PRGW_	ENSG00000171992|ENST00000307662|SYNPO	28.2542754592877	1.7418937515398478	1				NaN	NaN	0	NaN	4159	3817	7974
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7979	26.309	NaN	2471.7	30	0	423.71	0.106			+	21058	KKLDDIQK	8	60	494.2951492348043	986.5757455364086	2	494.2958679199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KKLDDIQK_	REV__ENSG00000204842|ENST00000673436|ATXN2;REV__nc|ENSG00000204842|Q99700-2|ATXN2;REV__nc|ENSG00000204842|Q99700-4|ATXN2;REV__nc|ENSG00000204842|Q99700-5|ATXN2;REV__nc|ENSG00000204842|Q99700|ATXN2	124.59426212874841	0.22798698790419603	1				NaN	NaN	0	NaN	4160	3817	7974
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7980	26.31	NaN	7152.5	30	0	2756.4	0.037	+			9547	ELEKEQLKI	9	49	377.2200556719912	1128.6383376161737	3	377.22015380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ELEKEQLKI_	STAMBP|p.R178Q|1|0.37|ENSG00000124356|chr2:73847544-73847544|G/A|missense_variant	36.446750945000026	0.4619375763483977	1				NaN	NaN	0	NaN	4161	3817	7974
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7981	26.311	NaN	1879.6	30	0	228.68	0.14	+			22732	KVAVVLIQK	9	34	333.2301655158641	996.6686671477923	3	333.2301330566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KVAVVLIQK_	ENSG00000168538|ENST00000334690|TRAPPC11;ENST00000509857.5_1_4:184585182-184595983:+|nuORF;nc|ENSG00000168538|Q7Z392-3|TRAPPC11;nc|ENSG00000168538|Q7Z392-4|TRAPPC11;TRAPPC11|p.T366Pfs*9|1|0.25|ENSG00000168538|chr4:183680246-183680246|A/-|frameshift_variant	44.377184641726394	0.36891676396732553	1				NaN	NaN	0	NaN	4162	3817	7974
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7989	26.333	NaN	4812.9	30	0	289.27	0.214	+			36116	SEKNMISKL	9	67	525.2863610045528	1048.5581690759054	2	525.2870483398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEKNMISKL_	ENSG00000036257|ENST00000264414|CUL3;nc|ENSG00000036257|Q13618-2|CUL3;nc|ENSG00000036257|Q13618-3|CUL3	143.37361013837676	0.008897369944672323	1				NaN	NaN	0	NaN	4167	3820	7988
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7990	26.336	NaN	1564.5	30	0	396.78	0.106				-1	SSPCHIEM	8	45	480.6985106095025	959.382468285805	2	480.6988830566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SSPC(Carbamidomethyl (C))HIEM_	ENSG00000265681|ENST00000580261|RPL17;ENST00000414070.1_1_1:109535017-109535455:+|nuORF;ENST00000446498.1_1_1:26781156-26781564:-|nuORF;ENST00000452862.1_1_3:197577273-197577471:-|nuORF;ENST00000498256.1_1_8:29489773-29490157:+|nuORF;nc|ENSG00000265681|P18621-2|RPL17;nc|ENSG00000265681|P18621-3|RPL17	33.51558372728122	0.7005509609380386	1				NaN	NaN	0	NaN	4168	3820	7988
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7991	26.338	NaN	1393.4	30	0	178.06	0.106	+			23580	LALRGKVTGGQ	11	49	571.3382302228645	NaN	0	571.3389892578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LALRGKVTGGQ_	ENST00000602243.5_1_19:39847430-39847586:+|nuORF	40.05817265558897	0.3867246477658885	1				NaN	NaN	0	NaN	4169	3820	7988
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7992	26.34	NaN	610.59	30	0	58.761	0.106				-1	FFFFFFFCWLC	11	31	834.3612060546875	NaN	0	834.3612060546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_FFFFFFFC(Carbamidomethyl (C))WLC(Carbamidomethyl (C))_	ENST00000298316.6_1_14:50361063-50361216:+|nuORF	3.159230865173134	0.456735970842152	1				NaN	NaN	0	NaN	4170	3820	7988
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7993	26.342	NaN	1008.7	30	0	140.61	0.106			+	18237	INSVSLWNAQK	11	47	630.3417358398438	NaN	0	630.3417358398438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_INSVSLWNAQK_	REV__ENSG00000141959|ENST00000349048|PFKL;REV__ENST00000397961.6_1_21:45725201-45746742:+|nuORF;REV__ENST00000466134.5_1_21:45719988-45734072:+|nuORF;REV__nc|ENSG00000141959|P17858-2|PFKL;REV__PFKL|p.P704Qfs*6|1|0.29|ENSG00000141959|chr21:44326177-44326177|C/-|frameshift_variant;REV__PFKL|p.S146*|1|0.38|ENSG00000141959|chr21:44312987-44312988|CA/-|frameshift_variant	33.921630207806714	0.41424167740351664	1				NaN	NaN	0	NaN	4171	3820	7988
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	7994	26.344	NaN	1613.5	30	0	272.11	0.038	+			16417	HERNLQSDVL	10	45	605.8117769696274	1209.6090010060548	2	605.8115844726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HERNLQSDVL_	DHX36|p.M705Nfs*20|1|0.33|ENSG00000174953|chr3:154284905-154284906|-/T|frameshift_variant;DHX36|p.R854Efs*4|3|0.36|ENSG00000174953|chr3:154280586-154280586|T/-|frameshift_variant;ENSG00000174953|ENST00000496811|DHX36;nc|ENSG00000174953|Q9H2U1-2|DHX36;nc|ENSG00000174953|Q9H2U1-3|DHX36	31.634271133179894	0.6214930414500597	1				NaN	NaN	0	NaN	4172	3820	7988
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8005	26.367	NaN	2406	30	0	580.97	0.214	+			49450	VVVPPVGAK	9	41	433.2787798509374	864.5430067686748	2	433.2786560058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVVPPVGAK_	ENSG00000125844|ENST00000377813|RRBP1;RRBP1|p.A628Gfs*69|1|0.35|ENSG00000125844|chr20:17621915-17621916|-/T|frameshift_variant	45.9519527083369	0.35044536499095585	1				NaN	NaN	0	NaN	4180	3823	8004
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8006	26.371	NaN	2205.6	30	0	307.51	0.106	+			26681	LVGSKCTRTV	10	59	532.2989381088169	1062.5833232844336	2	532.2984619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LVGSKCTRTV_	HELZ2|p.E1544K|1|0.35|ENSG00000130589|chr20:63564192-63564192|C/T|missense_variant	49.536043120802724	0.461275219792494	1				NaN	NaN	0	NaN	4181	3823	8004
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8007	26.373	NaN	970.58	30	0	150.78	0.106			+	23576	LALPHGLSE	9	44	468.7609297177988	NaN	0	468.760986328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LALPHGLSE_	REV__ENST00000474488.1_1_2:234343429-234350860:+|nuORF	50.0245360154114	0.20652386741182333	1				NaN	NaN	0	NaN	4182	3823	8004
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8008	26.375	NaN	1336	30	0	184.9	0.035	+			27458	MLMVIRLR	8	47	516.315769321454	1030.616985709708	2	516.3168334960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MLMVIRLR_	TYMP|p.A77V|1|0.3|ENSG00000025708|chr22:50529323-50529323|G/A|missense_variant	30.503639358989545	0.7238069182250283	1				NaN	NaN	0	NaN	4183	3823	8004
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8016	26.393	NaN	1974	30	0	408.96	0.214	+			3953	ATATIATLQK	10	56	509.30003631687316	1016.5855197005463	2	509.29998779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATATIATLQK_	ENSG00000163694|ENST00000295971|RBM47;ENST00000510871.5_1_4:40427923-40438677:-|nuORF;nc|ENSG00000163694|A0AV96-2|RBM47	43.650786325866115	0.5155049133366767	1				NaN	NaN	0	NaN	4188	3826	8015
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8017	26.397	NaN	910	30	0	150.31	0.106	+			31521	QLHRHLLA	8	38	329.86602783203125	NaN	0	329.86602783203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QLHRHLLA_	ENSG00000079337|ENST00000449771|RAPGEF3;ENST00000479866.5_1_12:48143124-48152369:-|nuORF;ENST00000482843.5_1_12:48142600-48152369:-|nuORF;nc|ENSG00000079337|O95398-2|RAPGEF3;nc|ENSG00000079337|O95398-3|RAPGEF3	17.364965105453717	1.7418937515398478	1				NaN	NaN	0	NaN	4189	3826	8015
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8018	26.399	NaN	1585.9	30	0	236.6	0.106				-1	TASILISCCA	10	53	519.7510972737238	1037.4876416142474	2	520.2528686523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_TASILISC(Carbamidomethyl (C))CA_	ENSG00000152315|ENST00000282146|KCNK13;KCNK13|p.V391Wfs*7|3|0.33|ENSG00000152315|chr14:90184941-90184941|G/-|frameshift_variant	40.77816245573522	0.5419747034533848	1				NaN	NaN	0	NaN	4190	3826	8015
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8019	26.4	NaN	1335	30	0	172.84	0.106			+	12041	FYMPTHLRC	9	50	584.2745361328125	NaN	0	584.2745361328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FYMPTHLRC_	REV__ENSG00000141194|ENST00000268912|OR4D1	26.79610172149135	0.34227917631780574	1				NaN	NaN	0	NaN	4191	3826	8015
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8020	26.402	NaN	1503.3	30	0	263.83	0.106	+			25117	LLQAHAAAQAL	11	52	553.8192348349384	1105.6239167366766	2	554.3202514648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LLQAHAAAQAL_	ENSG00000181284|ENST00000323206|TMEM102	30.568863376406313	0.6691487505135859	1				NaN	NaN	0	NaN	4192	3826	8015
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8021	26.404	NaN	1184.4	30	0	228.46	0.036				-1	FYFSGICY	8	47	528.7266845703125	NaN	0	528.7266845703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_FYFSGIC(Carbamidomethyl (C))Y_	ENSG00000168679|ENST00000369779|SLC16A4;nc|ENSG00000168679|O15374-2|SLC16A4;nc|ENSG00000168679|O15374-3|SLC16A4;nc|ENSG00000168679|O15374-5|SLC16A4	28.2542754592877	1.7418937515398478	1				NaN	NaN	0	NaN	4193	3826	8015
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8030	26.426	NaN	1699.8	30	0	255.17	0.214				-1	ENICDGKVT	9	58	518.2425454713489	1034.4705380094977	2	518.242919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_ENIC(Carbamidomethyl (C))DGKVT_	ENST00000481146.6_1_9:115449783-115456484:-|nuORF	37.81151784470057	0.4459294069877048	1				NaN	NaN	0	NaN	4199	3829	8029
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8031	26.429	NaN	1303.7	30	0	200.23	0.106	+			48841	VVAVLLTKK	9	52	485.8361112864304	NaN	0	485.8360900878906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVAVLLTKK_	ENSG00000169710|ENST00000306749|FASN;FASN|p.A413Hfs*39|2|0.47|ENSG00000169710|chr17:82091478-82091478|G/-|frameshift_variant	64.20726635412375	0.13137488984569443	1				NaN	NaN	0	NaN	4200	3829	8029
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8032	26.431	NaN	1804.4	30	0	561.92	0.106				-1	MFYRNVKLR	9	48	621.843078512828	1241.671604092456	2	621.8428955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))FYRNVKLR_	ENST00000527403.6_2_11:68305226-68305268:+|nuORF	23.04248740728303	0.5879033540491928	1				NaN	NaN	0	NaN	4201	3829	8029
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8033	26.433	NaN	1633.6	30	0	249.91	0.106	+			15565	GVGEVLHVK	9	54	469.27668582574825	936.5388187182965	2	469.2767639160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GVGEVLHVK_	ENSG00000213676|ENST00000375203|ATF6B;ENST00000495579.5_1_6:32088425-32095984:-|nuORF;nc|ENSG00000213676|Q99941-2|ATF6B	56.72105179125745	0.24094814563026265	1				NaN	NaN	0	NaN	4202	3829	8029
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8034	26.435	NaN	2823.2	30	0	340.18	0.106			+	-1	IETLIKCGL	9	62	523.7990842631531	1045.583615593106	2	523.8010864257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_IETLIKC(Carbamidomethyl (C))GL_	REV__ENST00000512560.5_1_5:79278531-79278720:-|nuORF	47.91560031466742	0.327412564698279	1				NaN	NaN	0	NaN	4203	3829	8029
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8035	26.437	NaN	1630.1	30	0	100.56	0.037	+			36963	SIMDPNQNVK	10	66	573.2836647627461	1144.552776592292	2	573.7855224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SIMDPNQNVK_	ENSG00000115963|ENST00000263895|RND3	58.22992032128504	0.38193887838457763	1				NaN	NaN	0	NaN	4204	3829	8029
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8041	26.453	NaN	3455.8	30	0	600.68	0.214	+			24062	LEKAENQVL	9	62	522.2891069827446	1042.563661032289	2	522.2905883789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LEKAENQVL_	ENSG00000185825|ENST00000345046|BCAP31;ENST00000563143.2_1_16:32882346-32883351:+|nuORF;nc|ENSG00000185825|P51572-2|BCAP31	70.8162118820467	0.13725933411854815	1				NaN	NaN	0	NaN	4207	3832	8040
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8042	26.456	NaN	3421.7	30	0	859.59	0.106	+			41988	SVYGYGVQK	9	60	500.7583921934075	999.502231453615	2	500.7584228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVYGYGVQK_	ENSG00000107164|ENST00000319725|FUBP3;FUBP3|p.P395Lfs*27|2|0.27|ENSG00000107164|chr9:130630689-130630689|C/-|frameshift_variant	64.20726635412375	0.17854274437659667	1				NaN	NaN	0	NaN	4208	3832	8040
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8043	26.458	NaN	1221.9	30	0	165.27	0.106	+			37757	SLVGLPPSK	9	54	449.2738457329953	896.5331385327906	2	449.27362060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLVGLPPSK_	ENSG00000167548|ENST00000301067|KMT2D;KMT2D|p.A3552Sfs*4|1|0.51|ENSG00000167548|chr12:49034153-49034154|-/T|frameshift_variant;KMT2D|p.A5076Hfs*2|1|0.12|ENSG00000167548|chr12:49026740-49026740|C/-|frameshift_variant;KMT2D|p.G5182Afs*61|1|0.57|ENSG00000167548|chr12:49026421-49026421|C/-|frameshift_variant;KMT2D|p.P3102Lfs*17|1|0.26|ENSG00000167548|chr12:49038051-49038051|G/-|frameshift_variant;KMT2D|p.Q4156Nfs*5|1|0.15|ENSG00000167548|chr12:49032239-49032239|G/-|frameshift_variant;KMT2D|p.S4327Afs*57|1|0.44|ENSG00000167548|chr12:49031727-49031727|G/-|frameshift_variant;KMT2D|p.T4629Hfs*18|1|0.31|ENSG00000167548|chr12:49030394-49030395|-/G|frameshift_variant;KMT2D|p.T4629Pfs*11|1|0.27|ENSG00000167548|chr12:49030395-49030395|G/-|frameshift_variant;KMT2D|p.V3089Wfs*30|1|0.12|ENSG00000167548|chr12:49038091-49038091|C/-|frameshift_variant;KMT2D|p.Y2907Tfs*3|1|0.26|ENSG00000167548|chr12:49038637-49038637|A/-|frameshift_variant;nc|ENSG00000167548|O14686-3|KMT2D	56.72105179125745	0.24094814563026265	1				NaN	NaN	0	NaN	4209	3832	8040
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8044	26.46	NaN	1588.2	30	0	110.09	0.106			+	18550	ISNANPVGFS	10	58	503.2540082774603	1004.4934636217206	2	503.2538757324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ISNANPVGFS_	REV__ENSG00000183963|ENST00000333137|SMTN;REV__ENST00000460658.5_1_22:31492537-31495228:+|nuORF;REV__nc|ENSG00000183963|P53814-2|SMTN;REV__nc|ENSG00000183963|P53814-6|SMTN;REV__nc|ENSG00000183963|P53814|SMTN	54.722347961057174	0.4138398245444204	1				NaN	NaN	0	NaN	4210	3832	8040
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8045	26.462	NaN	1935.5	30	0	860.02	0.106	+			13035	GEVRAPFT	8	48	438.7321734497573	875.4497939663146	2	438.7315673828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GEVRAPFT_	ENST00000605386.1_1_12:90103555-90103792:+|nuORF	47.91560031466742	0.6071945918984287	1				NaN	NaN	0	NaN	4211	3832	8040
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8046	26.464	NaN	3229.8	30	0	362.84	0.106	+			15633	GVLGGYIQKK	10	64	531.8192704991907	1061.6239880651813	2	531.819091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GVLGGYIQKK_	ENSG00000139687|ENST00000267163|RB1;ENST00000525036.1_1_13:48877982-48934322:+|nuORF;RB1|p.L561Mfs*9|1|0.07|ENSG00000139687|chr13:48381428-48381432|CCTTG/-|frameshift_variant;RB1|p.V654Cfs*4|1|0.33|ENSG00000139687|chr13:48456343-48456343|A/-|frameshift_variant;RB1|p.Y529*|1|0.23|ENSG00000139687|chr13:48381334-48381335|AC/-|frameshift_variant;RB1|p.Y529Tfs*3|1|0.08|ENSG00000139687|chr13:48381329-48381329|T/-|frameshift_variant	34.172542307311794	0.6007644933930345	1				NaN	NaN	0	NaN	4212	3832	8040
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8047	26.466	NaN	2187.2	30	0	298.2	0.036	+			820	AEGAGEQKVY	10	63	526.2567285156986	1050.498904098197	2	526.2570190429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AEGAGEQKVY_	HERVH-int_dup3525|chrX:4542186-4542680:-|2.3360434519655686|0.0028617900308425|9.67|450.0|18|1|anti-sense	60.11826168202944	0.36476464221954025	1				NaN	NaN	0	NaN	4213	3832	8040
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8057	26.487	NaN	1877.9	30	0	188.17	0.214	+			5567	AVAQLWGQKK	10	62	564.8306298444911	NaN	0	564.8303833007812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVAQLWGQKK_	ENSG00000163435|ENST00000367284|ELF3;ENST00000475698.1_1_1:201982922-201984448:+|nuORF;nc|ENSG00000163435|P78545-2|ELF3	83.6470233535746	0.08151478778011129	1				NaN	NaN	0	NaN	4220	3835	8056
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8058	26.491	NaN	1266.1	30	0	114.45	0.106	+			1995	AKFNAIVGSI	10	57	510.2977243385711	1018.5808957439422	2	510.2977294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AKFNAIVGSI_	tr|U7STM3|U7STM3_FUSNUIntegralmembraneproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01113PE=4SV=1	31.529811441608018	0.6223461015008678	1				NaN	NaN	0	NaN	4221	3835	8056
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8059	26.493	NaN	2741.1	30	0	1539.6	0.037			+	-1	ALLRRPPNC	9	39	366.20593660489055	1095.5959804148717	3	366.2056579589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_ALLRRPPNC(Carbamidomethyl (C))_	REV__ENST00000442760.2_1_13:45914489-45915204:-|nuORF	19.996771675451527	0.6112419832031292	1				NaN	NaN	0	NaN	4222	3835	8056
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8068	26.513	NaN	992.98	30	0	276.14	0.14			+	14750	GTKFDGAK	8	29	412.2189785526013	822.4234041720026	2	412.2186584472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTKFDGAK_	REV__ENSG00000160360|ENST00000440944|GPSM1;REV__GPSM1|p.P491Rfs*12|1|0.34|ENSG00000160360|chr9:136355703-136355703|C/-|frameshift_variant;REV__nc|ENSG00000160360|Q86YR5-3|GPSM1;REV__nc|ENSG00000160360|Q86YR5-4|GPSM1;REV__nc|ENSG00000160360|Q86YR5|GPSM1	27.882242232435846	0.7440473649773525	1				NaN	NaN	0	NaN	4228	3838	8067
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8078	26.536	NaN	3233.9	30	0	468.6	0.214			+	18378	IQTNELTPK	9	67	522.2891069827446	1042.563661032289	2	522.7890014648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IQTNELTPK_	REV__ICE1|p.F326Lfs*82|1|0.38|ENSG00000164151|chr5:5457612-5457612|T/-|frameshift_variant	82.7504851949679	0.08565546331141553	1				NaN	NaN	0	NaN	4235	3841	8077
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8079	26.54	NaN	1497.2	30	0	238.26	0.037			+	114	AAETTVEPSEE	11	61	581.7603110157067	1161.5060690982134	2	581.7598876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAETTVEPSEE_	REV__ENSG00000132780|ENST00000350030|NASP;REV__ENST00000529239.1_1_8:61851204-61851630:-|nuORF;REV__nc|ENSG00000132780|P49321-3|NASP;REV__nc|ENSG00000132780|P49321-4|NASP	41.42661286455405	0.5384226294179143	1				NaN	NaN	0	NaN	4236	3841	8077
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8088	26.562	NaN	3272	30	0	504.84	0.214				-1	EAGSYEMTNQ	10	73	573.2255504452352	1144.4365479572702	2	573.2266845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_EAGSYEM(Oxidation (M))TNQ_	ENSG00000137770|ENST00000260327|CTDSPL2;nc|ENSG00000137770|Q05D32-2|CTDSPL2	47.657333605630114	0.47858658696240314	1				NaN	NaN	0	NaN	4242	3844	8087
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8089	26.565	NaN	3712.3	30	0	1691.3	0.106	+			30843	QEGAKMAVRL	10	51	551.8047264601045	1101.5948999870088	2	551.80517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QEGAKMAVRL_	CTNNB1|p.L301Hfs*16|1|0.05|ENSG00000168036|chr3:41225827-41225831|TTCAA/-|frameshift_variant;ENSG00000168036|ENST00000349496|CTNNB1;ENSG00000173801|ENST00000393931|JUP	48.601550744091256	0.46988609897316763	1				NaN	NaN	0	NaN	4243	3844	8087
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8090	26.567	NaN	1034.6	30	0	173.64	0.106			+	-1	EGICAIVGL	9	40	466.25066459532	930.48677625744	2	466.75115966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_EGIC(Carbamidomethyl (C))AIVGL_	REV__ENSG00000111669|ENST00000396705|TPI1;REV__nc|ENSG00000111669|P60174-3|TPI1;REV__nc|ENSG00000111669|P60174-4|TPI1	33.51558372728122	0.4900267029546261	1				NaN	NaN	0	NaN	4244	3844	8087
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8091	26.569	NaN	1789.3	30	0	252.05	0.106	+			29319	NYQNVVHKL	9	54	557.8031839098169	1113.5918148864337	2	557.8035888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NYQNVVHKL_	ENSG00000146463|ENST00000314607|ZMYM4;nc|ENSG00000146463|Q5VZL5-2|ZMYM4;nc|ENSG00000146463|Q5VZL5-3|ZMYM4;nc|ENSG00000146463|Q5VZL5-4|ZMYM4;ZMYM4|p.A956Sfs*68|1|0.38|ENSG00000146463|chr1:35393690-35393691|-/A|frameshift_variant;ZMYM4|p.D1229Ifs*2|1|0.12|ENSG00000146463|chr1:35405175-35405175|G/-|frameshift_variant;ZMYM4|p.N1222Kfs*15|1|0.25|ENSG00000146463|chr1:35405154-35405155|-/A|frameshift_variant;ZMYM4|p.Y806Ifs*12|1|0.16|ENSG00000146463|chr1:35389058-35389059|-/A|frameshift_variant	95.81516180277367	0.04847050768394289	1				NaN	NaN	0	NaN	4245	3844	8087
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8092	26.571	NaN	1493.9	30	0	144.44	0.036	+			11958	FVLEGSSLLT	10	54	533.2973735798762	NaN	0	533.2977905273438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FVLEGSSLLT_	ENSG00000100095|ENST00000248933|SEZ6L;ENST00000483291.1_1_22:26743758-26747244:+|nuORF;nc|ENSG00000100095|Q9BYH1-2|SEZ6L;nc|ENSG00000100095|Q9BYH1-3|SEZ6L;nc|ENSG00000100095|Q9BYH1-5|SEZ6L;nc|ENSG00000100095|Q9BYH1-6|SEZ6L;nc|ENSG00000100095|Q9BYH1-7|SEZ6L	26.69291269510374	0.4125295221340092	1				NaN	NaN	0	NaN	4246	3844	8087
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8103	26.596	NaN	2073.4	30	0	184.18	0.215	+			36735	SGVSLAALKK	10	67	487.3054580520196	972.5963631708393	2	487.3052978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SGVSLAALKK_	ENSG00000124575|ENST00000244534|H1-3;ENSG00000168298|ENST00000304218|H1-4;ENSG00000187837|ENST00000343677|H1-2	37.50817390946774	0.5721060100277453	1				NaN	NaN	0	NaN	4254	3847	8102
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8104	26.6	NaN	2372.5	30	0	406.39	0.106	+			418	AATGHTVVL	9	45	434.7477543500855	867.480955766971	2	434.74774169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AATGHTVVL_	ENSG00000138796|ENST00000309522|HADH;nc|ENSG00000138796|Q16836-2|HADH;nc|ENSG00000138796|Q16836-3|HADH	38.80614096846853	0.43426287593479557	1				NaN	NaN	0	NaN	4255	3847	8102
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8105	26.602	NaN	1132.5	30	0	181.69	0.036			+	51448	YVEKKSRF	8	40	528.795125504819	1055.575698076438	2	528.7952880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YVEKKSRF_	REV__ENSG00000198932|ENST00000537097|GPRASP1;REV__GPRASP1|p.I1166Ffs*16|1|0.29|ENSG00000198932|chrX:102657404-102657404|A/-|frameshift_variant;REV__GPRASP1|p.L1217Ffs*23|1|0.19|ENSG00000198932|chrX:102657557-102657558|-/T|frameshift_variant	47.657333605630114	0.6087971902037268	1				NaN	NaN	0	NaN	4256	3847	8102
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8116	26.628	NaN	37756	30	0	13094	0.214	+			6644	AYVHMVTHF	9	63	374.179503745027	1119.516681835281	3	374.1795959472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_AYVHM(Oxidation (M))VTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	40.77816245573522	0.41113185337114944	1				NaN	NaN	0	NaN	4264	3850	8115
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8117	26.631	NaN	10439	30	0	1334.6	0.106	+			6645	AYVHMVTHF	9	74	560.7653408287039	1119.5161287242076	2	560.766357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_AYVHM(Oxidation (M))VTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	128.81572412613596	0.015862941183890658	1				NaN	NaN	0	NaN	4265	3850	8115
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8118	26.633	NaN	3526.2	30	0	700.56	0.106				-1	 	0	46	322.19354621121687	642.3725394892338	2	322.1933898925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	4266	3850	8115
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8119	26.635	NaN	2164.3	30	0	204.19	0.106	+			51578	YYLELCERPV	10	60	642.8193908317827	1283.6242287303653	2	642.81884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YYLELCERPV_	ENSG00000141452|ENST00000269221|RMC1;ENST00000587153.1_1_18:21083537-21084412:+|nuORF	64.20726635412375	0.3275756395432415	1				NaN	NaN	0	NaN	4267	3850	8115
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8120	26.637	NaN	1798.1	30	0	178.33	0.106	+			25766	LSAIEHVAEK	10	58	548.8045742988298	1095.5945956644596	2	548.8056030273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSAIEHVAEK_	ADGRF1|p.S523Pfs*3|1|0.35|ENSG00000153292|chr6:47009868-47009868|A/-|frameshift_variant;ADGRF1|p.S617Afs*12|1|0.14|ENSG00000153292|chr6:47009586-47009586|T/-|frameshift_variant;ENSG00000153292|ENST00000371253|ADGRF1;ENST00000471487.5_1_6:46982380-46993719:-|nuORF	44.377184641726394	0.5088115166961078	1				NaN	NaN	0	NaN	4268	3850	8115
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8121	26.639	NaN	2575.8	30	0	458.59	0.106			+	43798	TLLPEKLHG	9	38	336.534146866783	1006.5806112005489	3	336.5346984863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TLLPEKLHG_	REV__ENSG00000035499|ENST00000265036|DEPDC1B;REV__ENST00000512078.5_1_5:59893582-59984814:-|nuORF;REV__nc|ENSG00000035499|Q8WUY9-2|DEPDC1B	18.324413293986947	0.6112419832031293	1				NaN	NaN	0	NaN	4269	3850	8115
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8122	26.64	NaN	1694.6	30	0	657.48	0.033			+	29390	PAPRHVGK	8	45	431.25555722601297	860.496561518826	2	431.2550048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PAPRHVGK_	REV__ENSG00000127586|ENST00000262315|CHTF18;REV__ENST00000498439.1_1_16:846687-847972:+|nuORF;REV__nc|ENSG00000127586|Q8WVB6-2|CHTF18;REV__nc|ENSG00000127586|Q8WVB6-3|CHTF18	25.450171626174864	0.7628259754767981	1				NaN	NaN	0	NaN	4270	3850	8115
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8131	26.662	NaN	3742.5	30	0	690.57	0.215	+			22404	KTIVFVETK	9	63	532.8213311601235	1063.6281093870468	2	532.8214721679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTIVFVETK_	DDX5|p.D424Ifs*31|1|0.03|ENSG00000108654|chr17:64500720-64500721|-/AAGCAATTAAT|frameshift_variant;DDX5|p.D572Nfs*6|1|0.04|ENSG00000108654|chr17:64500054-64500055|-/TGACAAGATAGTT|frameshift_variant;DDX5|p.R502Gfs*87|1|0.21|ENSG00000108654|chr17:64500264-64500264|T/-|frameshift_variant;ENSG00000108654|ENST00000225792|DDX5;ENST00000581230.5_1_17:62498125-62502378:-|nuORF;nc|ENSG00000108654|P17844-2|DDX5	89.02883481214508	0.06760336634167786	1				NaN	NaN	0	NaN	4276	3853	8130
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8132	26.666	NaN	1986.4	30	0	264.45	0.106			+	6995	CRFAATAF	8	48	443.71554630497855	885.4165396767571	2	443.71527099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_CRFAATAF_	REV__PXDNL|p.F1055C|1|0.23|ENSG00000147485|chr8:51408460-51408460|A/C|missense_variant	40.5726180659479	0.6527593143185008	1				NaN	NaN	0	NaN	4277	3853	8130
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8133	26.668	NaN	2914.7	30	0	838.34	0.106				-1	RYLEKPMEI	9	46	398.87766253119605	1193.6111581937882	3	398.8776550292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_RYLEKPM(Oxidation (M))EI_	ENSG00000168610|ENST00000264657|STAT3;nc|ENSG00000168610|P40763-2|STAT3;nc|ENSG00000168610|P40763-3|STAT3;STAT3|p.R729Afs*3|2|0.33|ENSG00000168610|chr17:42316861-42316861|G/-|frameshift_variant	36.446750945000026	0.4619375763483977	1				NaN	NaN	0	NaN	4278	3853	8130
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8134	26.669	NaN	1745.5	30	0	198.74	0.106	+			40694	SVAVLRGIQK	10	60	535.8384193656034	NaN	0	535.8385620117188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVAVLRGIQK_	ENSG00000058600|ENST00000299853|POLR3E;ENST00000564061.5_1_16:22308800-22337695:+|nuORF;ENST00000569787.1_1_16:22328322-22336592:+|nuORF;nc|ENSG00000058600|Q9NVU0-2|POLR3E;nc|ENSG00000058600|Q9NVU0-3|POLR3E;nc|ENSG00000058600|Q9NVU0-4|POLR3E;nc|ENSG00000058600|Q9NVU0-5|POLR3E;POLR3E|p.G595Afs*51|1|0.33|ENSG00000058600|chr16:22326189-22326189|C/-|frameshift_variant;POLR3E|p.P340Lfs*35|1|0.38|ENSG00000058600|chr16:22322880-22322880|C/-|frameshift_variant	80.45461616416974	0.09722466730825292	1				NaN	NaN	0	NaN	4279	3853	8130
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8135	26.671	NaN	2272.7	30	0	302.64	0.106				-1	NKYGVFMRV	9	59	565.2955791350995	1128.576605336999	2	565.296142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_NKYGVFM(Oxidation (M))RV_	ENSG00000185129|ENST00000331327|PURA	38.80614096846853	0.43426287593479557	1				NaN	NaN	0	NaN	4280	3853	8130
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8136	26.673	NaN	2006.9	30	0	335.78	0.106	+			51478	YVHMVTHF	8	50	525.2474256952036	NaN	0	525.2476196289062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_YVHM(Oxidation (M))VTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	77.94384346573518	1.7418937515398478	1				NaN	NaN	0	NaN	4281	3853	8130
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8137	26.675	NaN	2605	30	0	500.97	0.036	+			29087	NTMNQFVNK	9	67	548.2658189464506	1094.5170849597012	2	548.7678833007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NTMNQFVNK_	ENSG00000168090|ENST00000303904|COPS6	101.25262130126117	0.03792372629710479	1				NaN	NaN	0	NaN	4282	3853	8130
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8143	26.691	NaN	2345.7	30	0	259.5	0.214	+			669	AEAITSQKL	9	53	480.7719171732533	959.5292814133066	2	480.77154541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEAITSQKL_	ENSG00000203697|ENST00000366872|CAPN8	70.8162118820467	0.13725933411854815	1				NaN	NaN	0	NaN	4285	3856	8142
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8144	26.695	NaN	1967.6	30	0	280.62	0.106			+	7699	DLMHTWCRHG	10	51	628.2769957868843	1254.5394386405685	2	628.2777099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DLMHTWCRHG_	REV__ENSG00000168065|ENST00000301891|SLC22A11;REV__nc|ENSG00000168065|Q9NSA0-2|SLC22A11	32.75053402867276	0.6123771875927935	1				NaN	NaN	0	NaN	4286	3856	8142
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8145	26.697	NaN	1246.1	30	0	158.2	0.106			+	23829	LCTHGGAN	8	44	386.67430727264343	NaN	0	386.6743469238281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LCTHGGAN_	REV__nc|ENSG00000185100|Q8N142-2|ADSS1	38.80614096846853	1.7418937515398478	1				NaN	NaN	0	NaN	4287	3856	8142
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8146	26.698	NaN	1365.8	30	0	146.43	0.035			+	7385	DDVSKQAQL	9	56	502.25687002134055	1002.4991871094811	2	502.25616455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DDVSKQAQL_	REV__ENSG00000133019|ENST00000676153|CHRM3	45.97224482568171	0.3502073465782774	1				NaN	NaN	0	NaN	4288	3856	8142
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8157	26.723	NaN	5914.1	30	0	1408.6	0.214	+			14854	GTLMWHQMK	9	69	574.2725847786963	1146.5306166241926	2	574.2731323242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_GTLM(Oxidation (M))WHQMK_	ENST00000346169.6_1_3:184032401-184033585:+|nuORF;ENST00000352767.7_2_3:184032446-184033585:+|nuORF	66.42927471994793	0.16001998865088202	1				NaN	NaN	0	NaN	4296	3859	8156
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8158	26.727	NaN	2386	30	0	230.56	0.106	+			938	AEIQGNINKV	10	58	543.3006567247922	1084.5867605163844	2	543.3016357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEIQGNINKV_	ENSG00000140575|ENST00000268182|IQGAP1;ENSG00000145703|ENST00000274364|IQGAP2;IQGAP1|p.N941Ifs*8|1|0.43|ENSG00000140575|chr15:90476693-90476693|A/-|frameshift_variant;IQGAP1|p.S1529Afs*10|1|0.15|ENSG00000140575|chr15:90492665-90492665|A/-|frameshift_variant;IQGAP2|p.K608Nfs*42|1|0.36|ENSG00000145703|chr5:76637072-76637072|A/-|frameshift_variant;IQGAP2|p.Q1499Rfs*15|1|0.05|ENSG00000145703|chr5:76701201-76701202|-/CCGAG|frameshift_variant;IQGAP2|p.T881Hfs*2|2|0.3|ENSG00000145703|chr5:76665133-76665133|A/-|frameshift_variant	96.0336014099291	0.09653029772959643	1				NaN	NaN	0	NaN	4297	3859	8156
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8159	26.729	NaN	2246.5	30	0	680.4	0.106				-1	ALPYNPMMVVM	11	45	641.3062341558332	1280.5979153784663	2	641.3067626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_ALPYNPMMVVM(Oxidation (M))_	ENSG00000004975|ENST00000005340|DVL2	19.996771675451527	0.7768568223548057	1				NaN	NaN	0	NaN	4298	3859	8156
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8160	26.731	NaN	1591.1	30	0	183.05	0.106	+			28799	NPHQQYSVY	9	52	568.262415692354	1134.510278451508	2	568.263427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NPHQQYSVY_	ENSG00000161813|ENST00000398473|LARP4;ENST00000521120.1_1_12:50835423-50848201:+|nuORF;LARP4|p.N373Ifs*3|1|0.26|ENSG00000161813|chr12:50454408-50454408|A/-|frameshift_variant;nc|ENSG00000161813|Q71RC2-2|LARP4;nc|ENSG00000161813|Q71RC2-3|LARP4;nc|ENSG00000161813|Q71RC2-4|LARP4;nc|ENSG00000161813|Q71RC2-6|LARP4;nc|ENSG00000161813|Q71RC2-7|LARP4	35.61828744233558	0.47037581924408073	1				NaN	NaN	0	NaN	4299	3859	8156
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8161	26.733	NaN	1290	30	0	134.22	0.106	+			35876	SEEGGHVVL	9	44	463.73240613835634	925.4502593435127	2	463.7317199707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SEEGGHVVL_	ENSG00000053747|ENST00000313654|LAMA3;nc|ENSG00000053747|Q16787-1|LAMA3;nc|ENSG00000053747|Q16787-3|LAMA3;nc|ENSG00000053747|Q16787-4|LAMA3	65.80317337860623	0.1652391959156183	1				NaN	NaN	0	NaN	4300	3859	8156
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8162	26.734	NaN	1321.1	30	0	270.89	0.038			+	2608	AQGRGKREKLP	11	39	620.3696355605745	NaN	0	620.3703002929688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AQGRGKREKLP_	REV__ENST00000229239.9_1_12:6643106-6643487:+|nuORF	19.626933109386073	0.456735970842152	1				NaN	NaN	0	NaN	4301	3859	8156
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8171	26.755	NaN	8222.1	30	0	3181.9	0.214	+			14966	GTMTGMLYK	9	60	509.24050257097315	1016.4664522087463	2	509.24041748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_GTMTGM(Oxidation (M))LYK_	ENSG00000178440|ENST00000651763|TIMM23B-AGAP6;ENSG00000204152|ENST00000651259|TIMM23B;ENSG00000265354|ENST00000580018|TIMM23;nc|ENSG00000204152|Q5SRD1-2|TIMM23B	107.00750918261382	0.032051501805654005	1				NaN	NaN	0	NaN	4307	3862	8170
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8172	26.758	NaN	2142.7	30	0	318.92	0.106				-1	LRAAMEKCM	9	58	534.7536199911949	NaN	0	534.7543334960938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LRAAMEKCM(Oxidation (M))_	ENST00000413305.5_1_3:8675424-8686428:-|nuORF;ENST00000495366.5_1_3:8675888-8681636:-|nuORF	29.170058357718403	0.3302935627494407	1				NaN	NaN	0	NaN	4308	3862	8170
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8173	26.76	NaN	1735.5	30	0	176.23	0.106	+			12792	GELVALKKV	9	51	478.8103256816716	955.6060984301432	2	478.81005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GELVALKKV_	CDK12|p.G1271Dfs*23|2|0.26|ENSG00000167258|chr17:39530648-39530648|C/-|frameshift_variant;CDK12|p.P1267Lfs*27|1|0.33|ENSG00000167258|chr17:39530639-39530639|C/-|frameshift_variant;CDK12|p.Q937Kfs*9|1|0.2|ENSG00000167258|chr17:39515766-39515766|T/-|frameshift_variant;ENSG00000167258|ENST00000447079|CDK12;nc|ENSG00000167258|Q9NYV4-2|CDK12;nc|ENSG00000167258|Q9NYV4-3|CDK12	56.72105179125745	0.24094814563026265	1				NaN	NaN	0	NaN	4309	3862	8170
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8174	26.762	NaN	1585.6	30	0	355.02	0.036	+			36424	SETTKGAYSL	10	53	528.7638605083708	1055.5131680835416	2	528.76220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SETTKGAYSL_	ENSG00000000938|ENST00000374005|FGR;ENSG00000010810|ENST00000354650|FYN;ENSG00000176105|ENST00000314574|YES1;ENST00000418510.1_1_22:26043331-26044389:+|nuORF;FYN|p.D506Gfs*3|1|0.19|ENSG00000010810|chr6:111661838-111661839|-/T|frameshift_variant;nc|ENSG00000010810|P06241-2|FYN;nc|ENSG00000010810|P06241-3|FYN	27.047317107675042	0.6589519614906109	1				NaN	NaN	0	NaN	4310	3862	8170
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8179	26.776	NaN	3531.9	30	0	720	0.214	+			9746	ENEFGLTSL	9	63	505.2453056467596	1008.4760583603193	2	505.24554443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ENEFGLTSL_	ENSG00000173706|ENST00000311127|HEG1;HEG1|p.H603Sfs*5|1|0.29|ENSG00000173706|chr3:125013772-125013773|-/A|frameshift_variant;HEG1|p.P916Lfs*2|1|0.07|ENSG00000173706|chr3:125012832-125012832|G/-|frameshift_variant;HEG1|p.S1105Qfs*21|1|0.12|ENSG00000173706|chr3:125002300-125002300|A/-|frameshift_variant;nc|ENSG00000173706|Q9ULI3-2|HEG1	87.75429964447693	0.0711966946989736	1				NaN	NaN	0	NaN	4312	3865	8178
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8180	26.78	NaN	2161.2	30	0	303.69	0.106			+	-1	MLVEYMVT	8	55	501.23735014373347	1000.460147354267	2	501.2384033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_MLVEYM(Oxidation (M))VT_	REV__tr|U7SZN4|U7SZN4_FUSNUIsoleucine--tRNAligaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=ileSPE=3SV=1	35.200714571348534	0.6875396545722289	1				NaN	NaN	0	NaN	4313	3865	8178
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8181	26.782	NaN	919.86	30	0	112.43	0.032				-1	CGSSCCSCCW	10	34	384.7720138288134	NaN	0	384.77252197265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_CGSSC(Carbamidomethyl (C))C(Carbamidomethyl (C))SCCW_	ENST00000228741.7_1_12:96588285-96617411:+|nuORF	1.8869224993972666	0.4201028297492154	1				NaN	NaN	0	NaN	4314	3865	8178
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8186	26.796	NaN	3027	30	0	232.2	0.215	+			4969	ATQVAVSVPK	10	64	500.29517627205195	998.5757996109039	2	500.2953186035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATQVAVSVPK_	EIF4G1|p.P1229Qfs*2|1|0.18|ENSG00000114867|chr3:184327606-184327606|C/-|frameshift_variant;ENSG00000114867|ENST00000346169|EIF4G1;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1	105.16503226865211	0.06235809640390954	1				NaN	NaN	0	NaN	4316	3868	8185
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8187	26.8	NaN	2172.4	30	0	709.75	0.106	+			22138	KSPVSKSPV	9	46	464.77671591539576	927.5388788975915	2	464.7762756347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KSPVSKSPV_	ENSG00000104722|ENST00000221166|NEFM;nc|ENSG00000104722|P07197-2|NEFM;NEFM|p.G845Vfs*10|1|0.22|ENSG00000104722|chr8:24918384-24918384|G/-|frameshift_variant;NEFM|p.I861Nfs*4|1|0.3|ENSG00000104722|chr8:24918430-24918431|-/A|frameshift_variant;NEFM|p.K721Rfs*18|1|0.25|ENSG00000104722|chr8:24918013-24918013|A/-|frameshift_variant;NEFM|p.K843Nfs*4|1|0.11|ENSG00000104722|chr8:24918383-24918384|-/T|frameshift_variant	29.170058357718403	0.5306379469863586	1				NaN	NaN	0	NaN	4317	3868	8185
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8188	26.802	NaN	1636.1	30	0	171.71	0.106			+	8952	EFAPGGEKVQ	10	52	531.2670778968331	1060.5196028604662	2	531.2677001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EFAPGGEKVQ_	REV__ARHGAP21|p.D1617Tfs*32|1|0.1|ENSG00000107863|chr10:24585440-24585440|C/-|frameshift_variant;REV__ARHGAP21|p.I1365Rfs*23|1|0.25|ENSG00000107863|chr10:24591280-24591281|TA/-|frameshift_variant;REV__ARHGAP21|p.K1443*|1|0.33|ENSG00000107863|chr10:24585962-24585963|-/A|frameshift_variant;REV__ARHGAP21|p.Q524Tfs*10|1|0.24|ENSG00000107863|chr10:24620325-24620326|-/T|frameshift_variant;REV__ARHGAP21|p.T482Kfs*8|1|0.08|ENSG00000107863|chr10:24620450-24620451|-/AGGTATT|frameshift_variant;REV__ENSG00000107863|ENST00000396432|ARHGAP21;REV__ENST00000401578.2_1_6:80777785-80779717:-|nuORF;REV__ENST00000476499.1_1_10:24918849-25010828:-|nuORF;REV__nc|ENSG00000107863|Q5T5U3-3|ARHGAP21	37.81151784470057	0.569310847604193	1				NaN	NaN	0	NaN	4318	3868	8185
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8189	26.804	NaN	1374	30	0	192.18	0.035			+	10722	FADKLVCVH	9	40	516.2721625000521	NaN	0	516.2721557617188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FADKLVCVH_	REV__ENSG00000151948|ENST00000442111|GLT1D1;REV__nc|ENSG00000151948|Q96MS3-2|GLT1D1;REV__nc|ENSG00000151948|Q96MS3-3|GLT1D1	35.61828744233558	0.29773779453147337	1				NaN	NaN	0	NaN	4319	3868	8185
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8197	26.824	NaN	2573.4	30	0	780.53	0.214	+			21794	KQVQFPVIQ	9	58	543.8177758277279	NaN	0	543.8165893554688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KQVQFPVIQ_	ENSG00000130348|ENST00000369046|QRSL1	35.61828744233558	0.29773779453147337	1				NaN	NaN	0	NaN	4324	3871	8196
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8198	26.827	NaN	2379.8	30	0	183.72	0.106	+			28960	NSEILDVLDN	10	53	566.2780330505778	1130.5415131679556	2	566.27978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NSEILDVLDN_	tr|U7SES3|U7SES3_FUSNUSH3bdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02340PE=4SV=1	25.891714612410027	0.6683890784157209	1				NaN	NaN	0	NaN	4325	3871	8196
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8199	26.829	NaN	1686.2	30	0	607.94	0.106			+	33958	RSCPIGFWS	9	48	526.7518135561786	NaN	0	526.7523193359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RSCPIGFWS_	REV__ENST00000343702.8_1_12:96052970-96059626:-|nuORF	35.61828744233558	0.29773779453147337	1				NaN	NaN	0	NaN	4326	3871	8196
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8200	26.831	NaN	2309.2	30	0	265.32	0.106			+	50326	WTPTPPLMQ	9	53	535.769234017379	1069.5239151015578	2	536.2710571289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_WTPTPPLMQ_	REV__ENSG00000116691|ENST00000235332|MIIP;REV__ENST00000460823.1_1_1:12091688-12091862:+|nuORF;REV__ENST00000466860.5_1_1:12090076-12091862:+|nuORF;REV__ENST00000478299.1_1_1:12091250-12091862:+|nuORF;REV__ENST00000498685.5_1_1:12089781-12091862:+|nuORF	31.529811441608018	0.5085848003137583	1				NaN	NaN	0	NaN	4327	3871	8196
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8201	26.833	NaN	2203.4	30	0	421.9	0.037	+			51222	YPVDGYRVY	9	45	377.8537225268369	1130.5393381807107	3	378.1874084472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YPVDGYRVY_	ENSG00000242265|ENST00000612748|PEG10;ENST00000465184.1_1_7:94294121-94298055:+|nuORF;ENST00000482108.1_2_7:94293788-94294991:+|nuORF;nc|ENSG00000242265|Q86TG7-4|PEG10;nc|ENSG00000242265|Q86TG7|PEG10	26.69291269510374	0.5537881896960711	1				NaN	NaN	0	NaN	4328	3871	8196
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8210	26.854	NaN	5145.3	30	0	434.03	0.214	+			36573	SFSTVHEKF	9	64	541.269039844215	1080.5235267552298	2	541.269775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SFSTVHEKF_	ENSG00000134987|ENST00000513710|WDR36;ENST00000505303.5_1_5:110428043-110447004:+|nuORF;nc|ENSG00000134987|Q8NI36|WDR36	84.81729255234993	0.07947707105691067	1				NaN	NaN	0	NaN	4334	3874	8209
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8211	26.858	NaN	7087.2	30	0	3318.6	0.106	+			8769	EEIAKVEKL	9	68	529.8083706446117	1057.6021883560234	2	529.808837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EEIAKVEKL_	ENSG00000170348|ENST00000303575|TMED10;ENST00000555036.1_1_14:75602424-75614456:-|nuORF;ENST00000556969.5_1_14:75601590-75614465:-|nuORF	150.81021883065287	0.006680279908938716	1				NaN	NaN	0	NaN	4335	3874	8209
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8212	26.86	NaN	14243	30	0	4624	0.106	+			36574	SFSTVHEKF	9	59	361.1818678758803	1080.523774227841	3	361.181884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SFSTVHEKF_	ENSG00000134987|ENST00000513710|WDR36;ENST00000505303.5_1_5:110428043-110447004:+|nuORF;nc|ENSG00000134987|Q8NI36|WDR36	49.536043120802724	0.308405419312776	1				NaN	NaN	0	NaN	4336	3874	8209
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8213	26.862	NaN	900.1	30	0	172.44	0.106			+	19957	KEGFVELGI	9	44	496.2784609237649	NaN	0	496.2781982421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEGFVELGI_	REV__tr|U7SXD8|U7SXD8_FUSNUHistidine--tRNAligaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=hisSPE=3SV=1	60.97194046774394	0.14517358171632622	1				NaN	NaN	0	NaN	4337	3874	8209
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8214	26.863	NaN	1632.6	30	0	283.32	0.106			+	12344	GDKSPPRMYK	10	54	589.8032819251044	NaN	0	589.8032836914062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GDKSPPRMYK_	REV__ENSG00000111224|ENST00000228820|PARP11;REV__nc|ENSG00000111224|Q9NR21-1|PARP11;REV__nc|ENSG00000111224|Q9NR21-2|PARP11	42.33807565288922	0.3540422799631949	1				NaN	NaN	0	NaN	4338	3874	8209
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8215	26.865	NaN	2768.4	30	0	169.27	0.035	+			28620	NKTRPRNR	8	56	521.3033629187353	1040.5921729042705	2	521.2195434570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NKTRPRNR_	ENSG00000099814|ENST00000414716|CEP170B;nc|ENSG00000099814|Q9Y4F5-3|CEP170B;nc|ENSG00000099814|Q9Y4F5|CEP170B	40.5726180659479	0.6527593143185008	1				NaN	NaN	0	NaN	4339	3874	8209
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8222	26.883	NaN	4499.3	30	0	380.67	0.214			+	26756	LVPDIGGEKI	10	71	520.8033272458096	NaN	0	520.8036499023438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LVPDIGGEKI_	REV__ENSG00000147485|ENST00000356297|PXDNL;REV__nc|ENSG00000147485|A1KZ92-2|PXDNL;REV__nc|ENSG00000147485|A1KZ92-3|PXDNL;REV__PXDNL|p.T1359Qfs*25|1|0.33|ENSG00000147485|chr8:51339695-51339695|T/-|frameshift_variant	82.7504851949679	0.08592666434486707	1				NaN	NaN	0	NaN	4343	3877	8221
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8223	26.887	NaN	1557.2	30	0	165.01	0.106	+			18986	IVSTSQVPIP	10	36	347.5376545274676	1039.591134182603	3	347.53765869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IVSTSQVPIP_	ENSG00000169894|ENST00000379458|MUC3A;nc|ENSG00000169894|Q02505-2|MUC3A;nc|ENSG00000169894|Q02505-3|MUC3A;nc|ENSG00000169894|Q02505-4|MUC3A;nc|ENSG00000169894|Q02505-5|MUC3A	38.80614096846853	0.5601458937078225	1				NaN	NaN	0	NaN	4344	3877	8221
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8224	26.889	NaN	3031.5	30	0	358.47	0.106			+	16231	HEDSSPISVSP	11	68	577.7694497705078	1153.5243466078155	2	577.7703857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HEDSSPISVSP_	REV__ENSG00000104205|ENST00000521198|SGK3;REV__nc|ENSG00000288602|Q96BR1-2|SGK3	45.97224482568171	0.4762245054624163	1				NaN	NaN	0	NaN	4345	3877	8221
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8225	26.891	NaN	2364.1	30	0	371.1	0.106				-1	CCCCCCCEEC	10	53	386.73922297362725	NaN	0	386.73931884765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_CCC(Carbamidomethyl (C))CCCCEEC_	ENSG00000170075|ENST00000367282|GPR37L1	7.3997283801893845	0.4201028297492154	1				NaN	NaN	0	NaN	4346	3877	8221
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8226	26.892	NaN	2787.4	30	0	312.5	0.106			+	21890	KRQICVRQ	8	69	544.3121159016546	1086.609678870109	2	544.3097534179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_KRQIC(Carbamidomethyl (C))VRQ_	REV__ENSG00000104884|ENST00000391945|ERCC2;REV__nc|ENSG00000104884|P18074-2|ERCC2	50.0245360154114	0.5941082100236891	1				NaN	NaN	0	NaN	4347	3877	8221
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8227	26.894	NaN	1185.7	30	0	178.43	0.106	+			47045	VLFAGQHISK	10	38	550.3168822745887	NaN	0	550.3167114257812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VLFAGQHISK_	ENSG00000136068|ENST00000295956|FLNB;FLNB|p.A832Rfs*9|1|0.26|ENSG00000136068|chr3:58111795-58111796|-/C|frameshift_variant;FLNB|p.G1596Vfs*33|1|0.36|ENSG00000136068|chr3:58136090-58136090|G/-|frameshift_variant;FLNB|p.G531Dfs*42|3|0.4|ENSG00000136068|chr3:58104061-58104061|G/-|frameshift_variant;FLNB|p.H532Tfs*9|1|0.31|ENSG00000136068|chr3:58104060-58104061|-/G|frameshift_variant;FLNB|p.N453Kfs*26|1|0.31|ENSG00000136068|chr3:58102212-58102213|-/A|frameshift_variant;nc|ENSG00000136068|O75369-2|FLNB;nc|ENSG00000136068|O75369-3|FLNB;nc|ENSG00000136068|O75369-4|FLNB;nc|ENSG00000136068|O75369-5|FLNB;nc|ENSG00000136068|O75369-6|FLNB;nc|ENSG00000136068|O75369-7|FLNB;nc|ENSG00000136068|O75369-8|FLNB;nc|ENSG00000136068|O75369-9|FLNB	72.09557110113691	0.1383596426166609	1				NaN	NaN	0	NaN	4348	3877	8221
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8228	26.896	NaN	1851.8	30	0	305.23	0.038			+	-1	EANCHCVVTR	10	54	594.7674716437713	1187.5203903543425	2	594.7678833007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_EANC(Carbamidomethyl (C))HCVVTR_	REV__ENSG00000145113|ENST00000463781|MUC4;REV__nc|ENSG00000145113|Q99102-10|MUC4;REV__nc|ENSG00000145113|Q99102-12|MUC4;REV__nc|ENSG00000145113|Q99102-13|MUC4;REV__nc|ENSG00000145113|Q99102-17|MUC4;REV__nc|ENSG00000145113|Q99102-3|MUC4	30.568863376406313	0.6301935916953115	1				NaN	NaN	0	NaN	4349	3877	8221
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8235	26.912	NaN	1986.5	30	0	287.14	0.214			+	29744	PHQLVQHATY	10	51	597.3066456657336	1192.5987383982672	2	597.3069458007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PHQLVQHATY_	REV__ENSG00000163673|ENST00000636136|DCLK3;REV__nc|ENSG00000163673|Q9C098|DCLK3	40.77816245573522	0.5419747034533848	1				NaN	NaN	0	NaN	4353	3880	8234
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8236	26.916	NaN	4538.5	30	0	455.51	0.106			+	25703	LRLRGGVAR	9	46	333.21633974265427	NaN	0	333.2162780761719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LRLRGGVAR_	REV__nc|ENSG00000103253|Q6PII5-3|HAGHL;REV__nc|ENSG00000103253|Q6PII5-4|HAGHL	36.446750945000026	0.29355505452396785	1				NaN	NaN	0	NaN	4354	3880	8234
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8237	26.918	NaN	1827.2	30	0	609.67	0.106				-1	VIMPKRLCL	9	43	363.5484969508783	1087.623661452835	3	363.54840087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_VIM(Oxidation (M))PKRLCL_	ENSG00000181761|ENST00000313472|OR8H3	20.94693142431847	0.6074874384046576	1				NaN	NaN	0	NaN	4355	3880	8234
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8238	26.92	NaN	973.39	30	0	163.69	0.106	+			20508	KFGASAILGV	10	43	481.7868242267323	961.5590955202646	2	481.78680419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KFGASAILGV_	ENO1|p.N109S|1|0.22|ENSG00000074800|chr1:8867235-8867235|T/C|missense_variant	27.882242232435846	0.6521336255503853	1				NaN	NaN	0	NaN	4356	3880	8234
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8239	26.922	NaN	1028.7	30	0	158.23	0.032	+			49112	VVLIGGKP	8	48	391.7615051269531	NaN	0	391.7615051269531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVLIGGKP_	ENSG00000165119|ENST00000376263|HNRNPK;nc|ENSG00000165119|P61978-3|HNRNPK;nc|ENSG00000165119|P61978|HNRNPK	15.63621529709179	1.7418937515398478	1				NaN	NaN	0	NaN	4357	3880	8234
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8250	26.947	NaN	7287.4	30	0	3059.7	0.214	+			23023	KVSRDKDGSK	10	69	560.3108547728993	1118.6071566125986	2	560.3111572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVSRDKDGSK_	ENSG00000082701|ENST00000264235|GSK3B;nc|ENSG00000082701|P49841-2|GSK3B	75.04331003522576	0.23611669241777622	1				NaN	NaN	0	NaN	4365	3883	8249
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8251	26.951	NaN	5047.6	30	0	734.08	0.106	+			15448	GTYVGLTCK	9	70	499.75214135465905	997.4897297761181	2	499.7520751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GTYVGLTC(Carbamidomethyl (C))K_	ENSG00000221926|ENST00000649191|TRIM16;nc|ENSG00000221926|O95361-2|TRIM16;nc|ENSG00000291110|Q309B1|TRIM16L	78.26377905018397	0.10505600812668463	1				NaN	NaN	0	NaN	4366	3883	8249
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8252	26.953	NaN	6338.7	30	0	2179.6	0.106			+	7673	DLEIIKHKSQ	10	74	626.8479687782993	1251.6813846233986	2	626.84814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))DLEIIKHKSQ_	REV__BBOX1|p.V271L|1|0.04|ENSG00000129151|chr11:27119820-27119820|G/T|missense_variant;REV__ENSG00000129151|ENST00000263182|BBOX1	56.72105179125745	0.3956618550748046	1				NaN	NaN	0	NaN	4367	3883	8249
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8253	26.955	NaN	1764.6	30	0	153.27	0.106	+			9563	ELGDLGEVLR	10	60	550.8003013596378	1099.5860497860756	2	550.8004760742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ELGDLGEVLR_	ENST00000597025.1_1_19:15567220-15568129:-|nuORF	71.87747018426188	0.26198133118427214	1				NaN	NaN	0	NaN	4368	3883	8249
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8254	26.957	NaN	2419	30	0	674.67	0.106			+	22462	KTLPMLGMIS	10	61	553.800743005533	1105.586933077866	2	553.8014526367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_KTLPM(Oxidation (M))LGMIS_	REV__ENSG00000136928|ENST00000259455|GABBR2	60.11826168202944	0.36476464221954025	1				NaN	NaN	0	NaN	4369	3883	8249
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8255	26.958	NaN	1417.1	30	0	202.61	0.106			+	2109	ALGGTVGIVTG	11	48	472.7739347140957	NaN	0	472.7737121582031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ALGGTVGIVTG_	REV__ENSG00000162542|ENST00000294543|TMCO4;REV__nc|ENSG00000162542|Q5TGY1-2|TMCO4;REV__TMCO4|p.F412Lfs*180|1|0.26|ENSG00000162542|chr1:19737399-19737400|AG/-|frameshift_variant	51.19269402634007	0.30675235723580535	1				NaN	NaN	0	NaN	4370	3883	8249
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8256	26.96	NaN	701.89	30	0	259.19	0.034	+			27905	MTSSAALLK	9	38	461.2568664550781	NaN	0	461.2568664550781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MTSSAALLK_	ENSG00000151612|ENST00000508784|ZNF827;nc|ENSG00000151612|Q17R98-2|ZNF827	23.04248740728303	0.3589936788096251	1				NaN	NaN	0	NaN	4371	3883	8249
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8266	26.983	NaN	5251.2	30	0	704.84	0.214			+	23609	LAPDGGEGALR	11	63	528.277797982003	1054.541043030806	2	528.2781372070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LAPDGGEGALR_	REV__ENSG00000213999|ENST00000424583|MEF2B;REV__nc|ENSG00000213999|Q02080|MEF2B	67.49366992349736	0.25663419177724	1				NaN	NaN	0	NaN	4378	3886	8265
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8267	26.987	NaN	11837	30	0	5026.8	0.106	+			6647	AYVHMVTHF	9	52	374.1795375361322	1119.5167832085967	3	374.17950439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_AYVHM(Oxidation (M))VTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	51.33545320467046	0.2872990594074956	1				NaN	NaN	0	NaN	4379	3886	8265
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8268	26.989	NaN	3694.1	30	0	288.42	0.106	+			18176	ILVEEMAPLK	10	69	571.8283560844477	1141.6421592356953	2	571.8296508789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ILVEEMAPLK_	ENSG00000197062|ENST00000421553|ZSCAN26;nc|ENSG00000197062|Q16670|ZSCAN26;ZSCAN26|p.E207Tfs*44|1|0.08|ENSG00000197062|chr6:28276276-28276277|-/CACCAATTACT|frameshift_variant	85.16082228582465	0.15877915086237185	1				NaN	NaN	0	NaN	4380	3886	8265
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8269	26.991	NaN	1918.6	30	0	201.98	0.036	+			43235	TEVQLQQKV	9	60	536.8040771484375	NaN	0	536.8040771484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TEVQLQQKV_	ENSG00000173230|ENST00000614479|GOLGB1;GOLGB1|p.D2495Tfs*21|1|0.22|ENSG00000173230|chr3:121691867-121691867|T/-|frameshift_variant;GOLGB1|p.K2450Rfs*27|1|0.37|ENSG00000173230|chr3:121692000-121692000|T/-|frameshift_variant;nc|ENSG00000173230|Q14789-2|GOLGB1;nc|ENSG00000173230|Q14789-3|GOLGB1;nc|ENSG00000173230|Q14789-4|GOLGB1;nc|ENSG00000173230|Q14789|GOLGB1	88.17693792209575	0.04527150213038833	1				NaN	NaN	0	NaN	4381	3886	8265
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8280	27.017	NaN	1865.2	30	0	267.39	0.214				-1	 	0	48	322.19354621121687	642.3725394892338	2	322.193603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	4389	3889	8279
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8281	27.02	NaN	3976.2	30	0	397.71	0.106	+			48395	VTIFIRGGNK	10	70	552.8305092064011	NaN	0	552.8302001953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTIFIRGGNK_	ENSG00000150753|ENST00000280326|CCT5;ENST00000423695.6_1_5:10250480-10261980:+|nuORF;nc|ENSG00000150753|P48643-2|CCT5	112.2953585152457	0.015099428735415433	1				NaN	NaN	0	NaN	4390	3889	8279
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8282	27.022	NaN	2997.3	30	0	604.2	0.106	+			41008	SVGSLFVKK	9	59	482.79468457846167	963.5748162237234	2	482.7945556640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVGSLFVKK_	ENSG00000176273|ENST00000427197|SLC35G1;nc|ENSG00000176273|Q2M3R5-2|SLC35G1;SLC35G1|p.S209Kfs*34|1|0.05|ENSG00000176273|chr10:93901016-93901017|-/AAGCATAG|frameshift_variant;SLC35G1|p.V92Cfs*7|2|0.27|ENSG00000176273|chr10:93898660-93898660|A/-|frameshift_variant	98.62937762414208	0.04060045538121712	1				NaN	NaN	0	NaN	4391	3889	8279
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8283	27.024	NaN	1532	30	0	213.16	0.106			+	7032	CSLTGIKE	8	46	454.2308258358927	NaN	0	454.23095703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_C(Carbamidomethyl (C))SLTGIKE_	REV__ENSG00000254685|ENST00000370898|FPGT;REV__nc|ENSG00000254685|O14772|FPGT	64.20726635412375	1.7418937515398478	1				NaN	NaN	0	NaN	4392	3889	8279
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8284	27.026	NaN	1509.5	30	0	325.05	0.106	+			6292	AVSTFAMVK	9	49	485.2572952275144	968.5000375218289	2	485.2574768066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_AVSTFAM(Oxidation (M))VK_	ENSG00000172893|ENST00000355527|DHCR7;ENST00000534701.1_1_11:71149825-71152361:-|nuORF	40.77816245573522	0.41113185337114944	1				NaN	NaN	0	NaN	4393	3889	8279
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8285	27.028	NaN	2201.9	30	0	272.19	0.106	+			40562	SVAECQLMK	9	59	533.2571537150891	1064.499754496978	2	533.759033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_SVAEC(Carbamidomethyl (C))QLMK_	ENSG00000105221|ENST00000392038|AKT2;ENST00000391844.8_1_19:40739781-40791100:-|nuORF;ENST00000537834.5_1_19:40745726-40771198:-|nuORF;nc|ENSG00000105221|P31751-2|AKT2	101.25262130126117	0.03792372629710479	1				NaN	NaN	0	NaN	4394	3889	8279
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8286	27.029	NaN	1158.9	30	0	127.26	0.034	+			1348	AEVAPVKDM	9	52	480.2464120472378	958.4782711612756	2	480.24700927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AEVAPVKDM_	ENSG00000047849|ENST00000683076|MAP4;MAP4|p.R919Gfs*14|1|0.44|ENSG00000047849|chr3:47870917-47870917|G/-|frameshift_variant;MAP4|p.T960Qfs*35|1|0.3|ENSG00000047849|chr3:47869309-47869309|T/-|frameshift_variant;MAP4|p.V999*|1|0.25|ENSG00000047849|chr3:47867318-47867318|T/-|frameshift_variant;nc|ENSG00000047849|P27816-2|MAP4;nc|ENSG00000047849|P27816-6|MAP4;nc|ENSG00000047849|P27816|MAP4	58.22992032128504	0.22837015374068087	1				NaN	NaN	0	NaN	4395	3889	8279
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8295	27.051	NaN	2686.4	30	0	594.3	0.214			+	18697	ITDGEKLRGN	10	61	551.7958926254503	1101.5772323177005	2	551.7966918945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ITDGEKLRGN_	REV__EIF5B|p.Q1121Rfs*13|1|0.27|ENSG00000158417|chr2:99396867-99396868|AG/-|frameshift_variant;REV__ENSG00000158417|ENST00000289371|EIF5B	37.81151784470057	0.569310847604193	1				NaN	NaN	0	NaN	4401	3892	8294
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8296	27.055	NaN	2420.7	30	0	492.7	0.106	+			2953	ASELFKGKK	9	43	336.53433165668076	1006.5811655702423	3	336.53485107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASELFKGKK_	ENSG00000166866|ENST00000300119|MYO1A;ENST00000487083.1_1_12:57423992-57424055:-|nuORF	17.364965105453717	0.6112419832031293	1				NaN	NaN	0	NaN	4402	3892	8294
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8297	27.056	NaN	2242.6	30	0	362.86	0.036	+			6875	CLIENKAGQD	10	63	545.7638609666375	NaN	0	545.7634887695312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_CLIENKAGQD_	TTN|p.E8248K|1|0.4|ENSG00000155657|chr2:178715721-178715721|C/T|missense_variant	39.252832667884924	0.37128895876774715	1				NaN	NaN	0	NaN	4403	3892	8294
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8302	27.071	NaN	2185.6	30	0	292.79	0.214	+			20479	KEYGQTMTV	9	61	528.7555996793183	1055.4966464254364	2	528.7553100585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEYGQTMTV_	ENSG00000117595|ENST00000367021|IRF6;nc|ENSG00000117595|O14896-2|IRF6	37.50817390946774	0.44948750990682723	1				NaN	NaN	0	NaN	4405	3895	8301
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8303	27.075	NaN	785.18	30	0	170.29	0.106				-1	 	0	37	328.211776233509	327.204499766909	1	328.2118835449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	4406	3895	8301
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8304	27.077	NaN	2178.6	30	0	441.36	0.106	+			6646	AYVHMVTHF	9	69	560.7653408287039	1119.5161287242076	2	560.7650146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_AYVHM(Oxidation (M))VTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	60.29395666154354	0.21116425950210296	1				NaN	NaN	0	NaN	4407	3895	8301
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8305	27.078	NaN	2326.6	30	0	219.4	0.106	+			1910	AIQNPTMINK	10	66	565.3047605139209	1128.5949680946417	2	565.3046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AIQNPTMINK_	ENSG00000167182|ENST00000376741|SP2;nc|ENSG00000167182|Q02086-2|SP2	95.4829727501206	0.09968275784893506	1				NaN	NaN	0	NaN	4408	3895	8301
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8306	27.08	NaN	3489.3	30	0	371.13	0.037	+			12465	GEDKTSAQVSL	11	65	567.7850611390946	1133.5555693449892	2	567.7859497070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GEDKTSAQVSL_	ENSG00000110002|ENST00000456829|VWA5A;nc|ENSG00000110002|O00534-2|VWA5A;nc|ENSG00000110002|O00534-3|VWA5A;nc|ENSG00000110002|O00534-4|VWA5A;VWA5A|p.D273Ifs*24|1|0.19|ENSG00000110002|chr11:124123014-124123014|A/-|frameshift_variant;VWA5A|p.D571Mfs*3|1|0.56|ENSG00000110002|chr11:124137094-124137094|A/-|frameshift_variant;VWA5A|p.G366Afs*38|1|0.21|ENSG00000110002|chr11:124123733-124123733|G/-|frameshift_variant	80.73710961997651	0.14622783403345802	1				NaN	NaN	0	NaN	4409	3895	8301
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8315	27.1	NaN	7991.1	30	0	1265	0.214	+			37146	SITTVQIQK	9	65	509.3006636560381	1016.5867743788763	2	509.30047607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SITTVQIQK_	ENST00000394091.5_1_3:101177876-101232004:-|nuORF	120.8684288430529	0.02067403653475984	1				NaN	NaN	0	NaN	4415	3898	8314
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8316	27.104	NaN	5931	30	0	663.4	0.106	+			6214	AVQTAAKELLK	11	76	586.3560063608672	1170.6974597885344	2	586.3562622070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVQTAAKELLK_	ENSG00000123992|ENST00000273075|DNPEP;ENST00000430206.5_1_2:220251659-220252065:-|nuORF;ENST00000460963.5_1_2:220250088-220252486:-|nuORF;ENST00000523527.5_1_2:220250965-220252516:-|nuORF;nc|ENSG00000123992|Q9ULA0-2|DNPEP	129.74186145086566	0.0014543940060239714	1				NaN	NaN	0	NaN	4416	3898	8314
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8317	27.106	NaN	2729.5	30	0	365.49	0.106	+			16958	HPQAINQQF	9	59	541.7722659120716	1081.529978890943	2	541.7732543945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HPQAINQQF_	ENSG00000119042|ENST00000417098|SATB2;ENST00000483346.2_1_2:200213306-200233427:-|nuORF;nc|ENSG00000119042|Q9UPW6-2|SATB2	51.33545320467046	0.2872990594074956	1				NaN	NaN	0	NaN	4417	3898	8314
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8318	27.108	NaN	7640	30	0	1405.8	0.106			+	47795	VSIENPRLLLS	11	57	414.24681891149487	1239.7186273346847	3	414.2467956542969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSIENPRLLLS_	REV__ENST00000380121.7_1_13:33010521-33020605:-|nuORF;REV__nc|ENSG00000244754|Q92802-3|N4BP2L2	35.495647763667336	0.6174708002554854	1				NaN	NaN	0	NaN	4418	3898	8314
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8319	27.11	NaN	1853.2	30	0	221.73	0.106	+			27643	MPRVQTQQY	9	59	575.786199823246	1149.5578467132918	2	575.7869873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MPRVQTQQY_	ENSG00000138674|ENST00000395310|SEC31A;nc|ENSG00000138674|O94979-10|SEC31A;nc|ENSG00000138674|O94979-2|SEC31A;nc|ENSG00000138674|O94979-3|SEC31A;nc|ENSG00000138674|O94979-4|SEC31A;nc|ENSG00000138674|O94979-6|SEC31A;nc|ENSG00000138674|O94979-7|SEC31A;nc|ENSG00000138674|O94979-8|SEC31A;nc|ENSG00000138674|O94979-9|SEC31A;SEC31A|p.P1058Qfs*62|1|0.4|ENSG00000138674|chr4:82827487-82827487|G/-|frameshift_variant	63.53385203322761	0.18415635464017938	1				NaN	NaN	0	NaN	4419	3898	8314
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8320	27.111	NaN	1221	30	0	119.41	0.036			+	25397	LPKEQKEQI	9	58	556.8189697265625	NaN	0	556.8189697265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LPKEQKEQI_	REV__ZNF658|p.R91Q|1|0.1|ENSG00000274349|chr9:66917838-66917838|G/A|missense_variant	52.936696900407355	0.1864545979552969	1				NaN	NaN	0	NaN	4420	3898	8314
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8328	27.13	NaN	1450.5	30	0	135.87	0.215	+			8833	EELQNVQRV	9	50	557.795524671076	1113.576496408952	2	557.7966918945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EELQNVQRV_	ENSG00000166920|ENST00000396650|C15orf48	85.86182877749512	0.07653218437724067	1				NaN	NaN	0	NaN	4425	3901	8327
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8329	27.133	NaN	1186.4	30	0	237.4	0.106	+			46966	VKILVAAVAG	10	41	470.8130486769346	939.6115444206692	2	470.8127746582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VKILVAAVAG_	ENSG00000099715|ENST00000698851|PCDH11Y;ENSG00000102290|ENST00000682573|PCDH11X;ENST00000361724.3_1_X:91090458-91134302:+|nuORF;nc|ENSG00000099715|Q9BZA8-2|PCDH11Y;nc|ENSG00000099715|Q9BZA8-3|PCDH11Y;nc|ENSG00000099715|Q9BZA8-4|PCDH11Y;nc|ENSG00000099715|Q9BZA8|PCDH11Y;nc|ENSG00000102290|Q9BZA7-2|PCDH11X;nc|ENSG00000102290|Q9BZA7-3|PCDH11X;nc|ENSG00000102290|Q9BZA7-4|PCDH11X;nc|ENSG00000102290|Q9BZA7-5|PCDH11X;nc|ENSG00000102290|Q9BZA7-6|PCDH11X;nc|ENSG00000102290|Q9BZA7-7|PCDH11X;nc|ENSG00000102290|Q9BZA7-8|PCDH11X	45.9519527083369	0.4943008177357963	1				NaN	NaN	0	NaN	4426	3901	8327
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8330	27.135	NaN	2425	30	0	631.81	0.106	+			22253	KTANEGGLVKS	11	60	552.3078116805194	1102.6010704278387	2	552.30810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KTANEGGLVKS_	ENSG00000149289|ENST00000278590|ZC3H12C;nc|ENSG00000149289|Q9C0D7-2|ZC3H12C	27.047317107675042	0.7060868989289394	1				NaN	NaN	0	NaN	4427	3901	8327
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8331	27.137	NaN	1793.2	30	0	815.61	0.106	+			37245	SKTRFRWI	8	40	547.3163994123199	1092.6182458914398	2	547.3175659179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SKTRFRWI_	ENSG00000189056|ENST00000428762|RELN;nc|ENSG00000189056|P78509-2|RELN;nc|ENSG00000189056|P78509-3|RELN;RELN|p.C2194Lfs*11|1|0.06|ENSG00000189056|chr7:103542822-103542823|-/TCGTAATGTATAATAG|frameshift_variant;RELN|p.H3353Tfs*46|1|0.25|ENSG00000189056|chr7:103483777-103483777|G/-|frameshift_variant	20.94693142431847	0.7975965917238792	1				NaN	NaN	0	NaN	4428	3901	8327
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8332	27.139	NaN	1033.8	30	0	203.75	0.106	+			16917	HPLQSSTGF	9	40	487.24047022191047	972.466387510621	2	487.24029541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HPLQSSTGF_	ENSG00000075568|ENST00000186436|TMEM131;TMEM131|p.L1469Tfs*5|1|0.43|ENSG00000075568|chr2:97772340-97772341|-/T|frameshift_variant	39.252832667884924	0.4290233611298554	1				NaN	NaN	0	NaN	4429	3901	8327
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8333	27.141	NaN	1930.1	30	0	241.03	0.106	+			50071	WGAALRSSL	9	56	480.76827920138464	NaN	0	480.76873779296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_WGAALRSSL_	ENSG00000166987|ENST00000355673|MBD6;MBD6|p.F318Sfs*59|1|0.21|ENSG00000166987|chr12:57525914-57525914|C/-|frameshift_variant;MBD6|p.G877Afs*69|1|0.53|ENSG00000166987|chr12:57528367-57528367|G/-|frameshift_variant;MBD6|p.P239L|1|0.13|ENSG00000166987|chr12:57525684-57525684|C/T|missense_variant;MBD6|p.P443Qfs*44|1|0.22|ENSG00000166987|chr12:57526292-57526292|C/-|frameshift_variant;MBD6|p.P478Hfs*9|1|0.21|ENSG00000166987|chr12:57526575-57526575|C/-|frameshift_variant;MBD6|p.P666Hfs*9|1|0.26|ENSG00000166987|chr12:57527137-57527137|C/-|frameshift_variant;MBD6|p.P671Lfs*4|2|0.31|ENSG00000166987|chr12:57527151-57527151|C/-|frameshift_variant;MBD6|p.P931Lfs*15|1|0.41|ENSG00000166987|chr12:57528528-57528528|C/-|frameshift_variant;MBD6|p.Q694Sfs*5|7|0.43|ENSG00000166987|chr12:57527219-57527219|C/-|frameshift_variant;MBD6|p.Q734Nfs*18|4|0.41|ENSG00000166987|chr12:57527618-57527618|C/-|frameshift_variant;MBD6|p.R878Pfs*26|1|0.34|ENSG00000166987|chr12:57528369-57528406|GGCCGAAAGCCTGGCAGCCGGCGGGAGCCTGGCCGACT/-|frameshift_variant;MBD6|p.T672Yfs*45|1|0.54|ENSG00000166987|chr12:57527150-57527151|-/C|frameshift_variant	54.776311868738084	0.17377682019723872	1				NaN	NaN	0	NaN	4430	3901	8327
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8334	27.142	NaN	2346	30	0	512.92	0.037	+			33973	RSERHRVHG	9	37	378.53896788444615	1132.5950742535385	3	378.5386962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RSERHRVHG_	ENST00000272217.6_1_1:202104910-202113731:-|nuORF	24.519189625965996	0.574102787014149	1				NaN	NaN	0	NaN	4431	3901	8327
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8340	27.158	NaN	1782.7	30	0	309.54	0.214	+			19874	KEEPPQPQL	9	54	533.2826453895186	1064.5507378458371	2	533.282958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEEPPQPQL_	ENSG00000101084|ENST00000344795|RAB5IF;ENST00000491113.1_1_20:35234354-35236222:+|nuORF;nc|ENSG00000101084|Q9BUV8-3|RAB5IF;nc|ENSG00000101084|Q9BUV8-4|RAB5IF;nc|ENSG00000101084|Q9BUV8-5|RAB5IF;nc|ENSG00000101084|Q9BUV8|RAB5IF	56.72105179125745	0.24094814563026265	1				NaN	NaN	0	NaN	4434	3904	8339
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8341	27.162	NaN	1777	30	0	465.38	0.106	+			7802	DPIGGHIHSY	10	51	548.2644525459334	1094.5143521586667	2	548.26513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DPIGGHIHSY_	ENSG00000136286|ENST00000258787|MYO1G;ENST00000480503.5_1_7:45014700-45018578:-|nuORF;ENST00000483585.5_1_7:45011810-45018578:-|nuORF;nc|ENSG00000136286|B0I1T2-2|MYO1G;nc|ENSG00000136286|B0I1T2-3|MYO1G;nc|ENSG00000136286|B0I1T2-4|MYO1G	25.57405402267927	0.6709832231498071	1				NaN	NaN	0	NaN	4435	3904	8339
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8342	27.164	NaN	1351.1	30	0	136.61	0.035	+			39295	STASMGGWTK	10	52	513.2397126827575	1024.464872432315	2	513.2386474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STASMGGWTK_	ENSG00000166348|ENST00000687698|USP54;ENST00000498143.5_1_10:75279553-75335416:-|nuORF;nc|ENSG00000166348|Q70EL1-6|USP54;nc|ENSG00000166348|Q70EL1-7|USP54;USP54|p.R831Tfs*6|1|0.07|ENSG00000166348|chr10:73519973-73519983|CAGGGCAAGTC/-|frameshift_variant	68.84614121027924	0.2867470276772903	1				NaN	NaN	0	NaN	4436	3904	8339
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8351	27.184	NaN	880.9	30	0	151.62	0.214			+	-1	WCCSCCSSGC	10	41	384.77186463340934	NaN	0	384.7713623046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_WC(Carbamidomethyl (C))C(Carbamidomethyl (C))SCCSSGC_	REV__ENST00000228741.7_1_12:96588285-96617411:+|nuORF	4.0829091318959865	0.4201028297492154	1				NaN	NaN	0	NaN	4442	3907	8350
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8352	27.188	NaN	1682	30	0	186.27	0.106	+			40687	SVATGLNMMKK	11	55	590.3144792327897	1178.6144055323794	2	590.315185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVATGLNMMKK_	BAIAP2L1|p.F462Lfs*34|1|0.21|ENSG00000006453|chr7:98304232-98304232|A/-|frameshift_variant;BAIAP2L1|p.P436Hfs*60|4|0.39|ENSG00000006453|chr7:98304311-98304311|G/-|frameshift_variant;ENSG00000006453|ENST00000005260|BAIAP2L1;LMTK2-BAIAP2L1|1|fusion	46.45678178249821	0.46959456050452836	1				NaN	NaN	0	NaN	4443	3907	8350
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8353	27.19	NaN	1194.3	30	0	378.7	0.106				-1	LQRYLPYND	9	44	612.3074951171875	NaN	0	612.3074951171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LQRYLPYND_	ENST00000498274.5_1_3:101298529-101298565:+|nuORF	34.172542307311794	0.30503706118289736	1				NaN	NaN	0	NaN	4444	3907	8350
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8354	27.192	NaN	1312.4	30	0	154.78	0.038			+	7493	DGHELQLDLTN	11	47	627.7996826171875	NaN	0	627.7996826171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DGHELQLDLTN_	REV__ENSG00000111670|ENST00000299314|GNPTAB;REV__GNPTAB|p.F1228Lfs*5|2|0.13|ENSG00000111670|chr12:101749110-101749110|A/-|frameshift_variant	23.52269567125451	0.456735970842152	1				NaN	NaN	0	NaN	4445	3907	8350
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8365	27.215	NaN	5218.5	30	0	490.75	0.212	+			38789	SSMSLEQKMTF	11	70	660.7941565782559	1319.5737602233116	2	660.7944946289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_SSM(Oxidation (M))SLEQKM(Oxidation (M))TF_	ENSG00000205279|ENST00000379445|CTXN3	40.05817265558897	0.5571470695993369	1				NaN	NaN	0	NaN	4453	3910	8364
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8366	27.219	NaN	2407.9	30	0	1209.7	0.106	+			37741	SLTQICIK	8	40	453.25972480907745	904.5048966849549	2	453.2596740722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLTQICIK_	ENSG00000174442|ENST00000307897|ZWILCH;nc|ENSG00000174442|Q9H900-2|ZWILCH	44.116797842482775	0.6307669463330267	1				NaN	NaN	0	NaN	4454	3910	8364
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8367	27.221	NaN	1287.4	30	0	209.27	0.035			+	7900	DRWTPRGR	8	43	522.279666786465	1042.5447806397299	2	522.2791748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DRWTPRGR_	REV__ENST00000481661.1_1_14:59931594-59931975:-|nuORF	31.954861631926434	0.7126016770032289	1				NaN	NaN	0	NaN	4455	3910	8364
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8374	27.237	NaN	2421.7	30	0	198.71	0.145				-1	SELFNSMFM	9	69	561.2370991153063	1120.4596452974124	2	561.2380981445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_SELFNSMFM(Oxidation (M))_	ENSG00000112159|ENST00000369393|MDN1;MDN1|p.L4077Cfs*15|1|0.16|ENSG00000112159|chr6:89680625-89680625|G/-|frameshift_variant;MDN1|p.L5278Ffs*6|1|0.18|ENSG00000112159|chr6:89652273-89652274|-/A|frameshift_variant	44.116797842482775	0.37197099687881774	1				NaN	NaN	0	NaN	4459	3913	8373
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8379	27.253	NaN	2035.6	30	0	149.71	0.214	+			49791	VYSHVIQKL	9	71	543.8186899129465	1085.622826892693	2	543.8186645507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYSHVIQKL_	ENSG00000135094|ENST00000257549|SDS;SDS|p.G305Afs*18|1|0.17|ENSG00000135094|chr12:113393014-113393014|C/-|frameshift_variant	85.16082228582465	0.07850854922700509	1				NaN	NaN	0	NaN	4461	3916	8378
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8380	27.257	NaN	1437.9	30	0	113.98	0.106	+			41404	SVMRPEQIMK	10	57	609.8200369161133	1217.6255208990265	2	609.8204345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVMRPEQIMK_	ENSG00000185883|ENST00000330398|ATP6V0C	37.939636503570505	0.5681302983350793	1				NaN	NaN	0	NaN	4462	3916	8378
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8381	27.259	NaN	1675.4	30	0	331.76	0.106	+			46591	VFQEHQTL	8	53	501.25650240728237	1000.4984518813648	2	501.2558288574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VFQEHQTL_	ENSG00000085733|ENST00000301843|CTTN;ENST00000415461.2_1_11:70253665-70266006:+|nuORF;nc|ENSG00000085733|Q14247-2|CTTN;nc|ENSG00000085733|Q14247-3|CTTN	56.72105179125745	0.5342425954139568	1				NaN	NaN	0	NaN	4463	3916	8378
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8382	27.261	NaN	1324.6	30	0	130.93	0.106	+			12868	GEQVAVKSL	9	45	465.7661660403735	929.517779147547	2	466.2666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEQVAVKSL_	ENSG00000162434|ENST00000342505|JAK1;ENST00000481702.1_1_1:65305238-65306936:-|nuORF	35.17822180527639	0.47448846649768284	1				NaN	NaN	0	NaN	4464	3916	8378
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8383	27.263	NaN	1201.6	30	0	155.23	0.035			+	11572	FPMMFSQM	8	60	517.7127250304283	1033.4108971276564	2	517.7132568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_FPMMFSQM(Oxidation (M))_	REV__ENSG00000132471|ENST00000254806|WBP2;REV__ENST00000416574.6_1_17:73843478-73851408:-|nuORF;REV__ENST00000587642.5_1_17:73844624-73847864:-|nuORF;REV__ENST00000589241.5_1_17:73844624-73851319:-|nuORF;REV__ENST00000589834.1_1_17:73845679-73851408:-|nuORF;REV__ENST00000590450.5_1_17:73845072-73851378:-|nuORF;REV__nc|ENSG00000132471|Q969T9-2|WBP2;REV__WBP2|p.M185*|1|0.26|ENSG00000132471|chr17:75847590-75847590|G/-|frameshift_variant	55.50420428727701	0.5462892107279674	1				NaN	NaN	0	NaN	4465	3916	8378
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8388	27.277	NaN	11834	30	0	2906.4	0.214	+			49792	VYSHVIQKL	9	74	362.8816403567313	1085.623091670394	3	362.8816833496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYSHVIQKL_	ENSG00000135094|ENST00000257549|SDS;SDS|p.G305Afs*18|1|0.17|ENSG00000135094|chr12:113393014-113393014|C/-|frameshift_variant	58.78195531508484	0.22376836668196862	1				NaN	NaN	0	NaN	4467	3919	8387
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8389	27.281	NaN	2595.8	30	0	365.33	0.106	+			10062	ESGSRAAGPVS	11	59	509.2538434130849	1016.4931338929698	2	509.25360107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ESGSRAAGPVS_	NEIL1|p.Q86Sfs*67|1|0.18|ENSG00000140398|chr15:75349157-75349157|T/-|frameshift_variant	46.45678178249821	0.46959456050452836	1				NaN	NaN	0	NaN	4468	3919	8387
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8390	27.283	NaN	3718.4	30	0	2121.4	0.106	+			15663	GVMRVGLVAK	10	47	343.8792333340425	1028.6158706023275	3	343.8789978027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GVMRVGLVAK_	ENSG00000129351|ENST00000588657|ILF3;ENST00000587928.5_1_19:10781281-10792148:+|nuORF;nc|ENSG00000129351|Q12906-2|ILF3;nc|ENSG00000129351|Q12906-3|ILF3;nc|ENSG00000129351|Q12906-4|ILF3;nc|ENSG00000129351|Q12906-5|ILF3;nc|ENSG00000129351|Q12906-6|ILF3;nc|ENSG00000129351|Q12906|ILF3	40.77816245573522	0.5419747034533848	1				NaN	NaN	0	NaN	4469	3919	8387
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8391	27.284	NaN	935.53	30	0	269.1	0.036	+			6818	CHACHCQDGT	10	46	537.6800778872033	1073.3456028412065	2	537.6812744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_CHACHCQDGT_	ENSG00000135253|ENST00000610776|KCP;KCP|p.D914Tfs*111|1|0.3|ENSG00000135253|chr7:128885218-128885218|G/-|frameshift_variant;KCP|p.E906Kfs*119|1|0.14|ENSG00000135253|chr7:128885242-128885242|G/-|frameshift_variant;KCP|p.Q841Ifs*185|1|0.15|ENSG00000135253|chr7:128886727-128886728|-/TC|frameshift_variant;KCP|p.S1006Afs*19|1|0.32|ENSG00000135253|chr7:128884051-128884051|G/-|frameshift_variant;nc|ENSG00000135253|Q6ZWJ8-4|KCP;nc|ENSG00000135253|Q6ZWJ8|KCP	15.641811463095205	0.7369665665077569	1				NaN	NaN	0	NaN	4470	3919	8387
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8398	27.302	NaN	2566.8	30	0	256.53	0.214	+			15664	GVMRVGLVAK	10	61	515.3155821362868	1028.6166113393735	2	515.3160400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVMRVGLVAK_	ENSG00000129351|ENST00000588657|ILF3;ENST00000587928.5_1_19:10781281-10792148:+|nuORF;nc|ENSG00000129351|Q12906-2|ILF3;nc|ENSG00000129351|Q12906-3|ILF3;nc|ENSG00000129351|Q12906-4|ILF3;nc|ENSG00000129351|Q12906-5|ILF3;nc|ENSG00000129351|Q12906-6|ILF3;nc|ENSG00000129351|Q12906|ILF3	67.49366992349736	0.29779660154124327	1				NaN	NaN	0	NaN	4474	3922	8397
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8399	27.306	NaN	1633.6	30	0	221.98	0.106			+	6730	CALIRVAK	8	46	437.27049086006775	872.5264287869355	2	437.2707824707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_CALIRVAK_	REV__ENSG00000265972|ENST00000582401|TXNIP	65.80317337860623	0.44433089765398776	1				NaN	NaN	0	NaN	4475	3922	8397
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8400	27.308	NaN	1731.4	30	0	246.98	0.106	+			1164	AENGKSNFL	9	54	490.2457225058588	978.4768920785176	2	490.24591064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AENGKSNFL_	B2M|p.V69Sfs*21|1|0.67|ENSG00000166710|chr15:44715554-44715555|-/A|frameshift_variant;B2M|p.V69Wfs*34|1|0.32|ENSG00000166710|chr15:44715555-44715555|A/-|frameshift_variant;B2M|p.Y98Lfs*5|1|0.08|ENSG00000166710|chr15:44715648-44715648|A/-|frameshift_variant;ENSG00000166710|ENST00000648006|B2M;ENST00000559720.5_1_15:45003705-45007919:+|nuORF	60.1669710687717	0.2122228167747824	1				NaN	NaN	0	NaN	4476	3922	8397
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8401	27.31	NaN	1192.5	30	0	193.67	0.106				-1	TVKDSKFKM	9	47	550.2934040835298	NaN	0	550.293212890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_TVKDSKFKM(Oxidation (M))_	AHNAK2|p.A828V|1|0.43|ENSG00000185567|chr14:104952968-104952968|G/A|missense_variant	35.61828744233558	0.29773779453147337	1				NaN	NaN	0	NaN	4477	3922	8397
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8402	27.312	NaN	1281.8	30	0	129.35	0.036	+			9292	EHPKKQKIT	9	48	554.8268968644069	1107.6392407956137	2	554.8271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EHPKKQKIT_	ENSG00000106346|ENST00000306177|USP42;ENST00000479544.6_1_7:6150764-6196715:+|nuORF;ENST00000521713.1_1_7:6179681-6199085:+|nuORF;nc|ENSG00000106346|Q9H9J4|USP42;USP42|p.A1121Tfs*18|1|0.42|ENSG00000106346|chr7:6154914-6154920|CGCGCCC/-|frameshift_variant	37.81151784470057	0.4459294069877048	1				NaN	NaN	0	NaN	4478	3922	8397
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8409	27.329	NaN	1882.2	30	0	322.27	0.215			+	16613	HGSGILQL	8	46	412.7349619589938	823.4553709847876	2	412.73486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HGSGILQL_	REV__ENSG00000198092|ENST00000356291|TMPRSS11F	60.29395666154354	0.49887135096048313	1				NaN	NaN	0	NaN	4482	3925	8408
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8410	27.333	NaN	1786.4	30	0	191.12	0.106			+	48122	VSVEVTLTRG	10	60	530.8037576677445	1059.592962402289	2	530.8040161132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSVEVTLTRG_	REV__ENSG00000112208|ENST00000370693|BAG2;REV__nc|ENSG00000112208|O95816-2|BAG2	54.776311868738084	0.41334902933431344	1				NaN	NaN	0	NaN	4483	3925	8408
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8411	27.335	NaN	1803.9	30	0	608.08	0.106	+			26284	LSTSAMFDRA	10	46	557.7636432415485	NaN	0	557.7632446289062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_LSTSAM(Oxidation (M))FDRA_	MMACHC|p.P56S|1|0.38|ENSG00000132763|chr1:45507440-45507440|C/T|missense_variant	58.22992032128504	0.24873293749302264	1				NaN	NaN	0	NaN	4484	3925	8408
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8412	27.337	NaN	834.12	30	0	119.49	0.106			+	47233	VMLKRCIT	8	35	482.276611328125	NaN	0	482.276611328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VMLKRCIT_	REV__CFAP54|p.Q2612Rfs*5|1|0.32|ENSG00000188596|chr12:96753887-96753887|T/-|frameshift_variant;REV__ENSG00000188596|ENST00000524981|CFAP54;REV__nc|ENSG00000188596|Q96N23-2|CFAP54	19.359975847455235	1.7418937515398478	1				NaN	NaN	0	NaN	4485	3925	8408
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8413	27.339	NaN	657.36	30	0	158.72	0.034			+	-1	LSGHHLDM	8	35	463.21336194367757	924.4121709541552	2	463.2127380371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_LSGHHLDM(Oxidation (M))_	REV__ENST00000437325.2_1_1:235901419-235901638:+|nuORF	28.2542754592877	0.7411748056684583	1				NaN	NaN	0	NaN	4486	3925	8408
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8420	27.357	NaN	1448.3	30	0	194.67	0.214			+	-1	KSGNAAAM	8	38	383.1818532680218	764.3491536028437	2	383.1815185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_KSGNAAAM(Oxidation (M))_	REV__ENSG00000090097|ENST00000461554|PCBP4;REV__ENST00000492809.5_1_3:51992079-51994784:-|nuORF;REV__ENST00000497390.5_1_3:51992079-51994784:-|nuORF;REV__nc|ENSG00000090097|P57723-2|PCBP4	21.70233525837049	0.7917639344264583	1				NaN	NaN	0	NaN	4490	3928	8419
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8421	27.36	NaN	2688.4	30	0	162.03	0.035	+			1754	AIALALREK	9	60	492.8134701190021	983.6123873048042	2	492.81280517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AIALALREK_	ENSG00000039123|ENST00000230640|MTREX	67.49366992349736	0.1516260258713357	1				NaN	NaN	0	NaN	4491	3928	8419
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8427	27.376	NaN	2934.1	30	0	248.46	0.214			+	18207	IMTMLYKI	8	67	514.7802217075031	1027.545890481806	2	514.77978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_IM(Oxidation (M))TMLYKI_	REV__ENSG00000155760|ENST00000286201|FZD7	42.47446043378293	0.6409579893742323	1				NaN	NaN	0	NaN	4494	3931	8426
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8428	27.38	NaN	3082.5	30	0	538.19	0.106	+			6630	AYSVEHNQL	9	58	530.7567324268034	1059.4989119204067	2	530.75732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AYSVEHNQL_	ENSG00000117523|ENST00000647382|PRRC2C;nc|ENSG00000117523|Q9Y520-2|PRRC2C;nc|ENSG00000117523|Q9Y520-3|PRRC2C;nc|ENSG00000117523|Q9Y520-4|PRRC2C;nc|ENSG00000117523|Q9Y520-5|PRRC2C;nc|ENSG00000117523|Q9Y520-6|PRRC2C;nc|ENSG00000117523|Q9Y520|PRRC2C;PRRC2C|p.K1018Nfs*7|1|0.21|ENSG00000117523|chr1:171540521-171540521|A/-|frameshift_variant;PRRC2C|p.P2791Lfs*5|1|0.1|ENSG00000117523|chr1:171591761-171591761|C/-|frameshift_variant	47.657333605630114	0.33044192980041115	1				NaN	NaN	0	NaN	4495	3931	8426
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8429	27.382	NaN	632.62	30	0	63.209	0.106				-1	 	0	31	322.19354621121687	642.3725394892338	2	322.1934814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	4496	3931	8426
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8430	27.384	NaN	2964.7	30	0	317.74	0.106	+			15328	GTVIVDSTVGK	11	62	538.3033368659854	1074.5921207987708	2	538.80517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTVIVDSTVGK_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	64.22387071457851	0.2857512628307259	1				NaN	NaN	0	NaN	4497	3931	8426
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8431	27.385	NaN	2216.4	30	0	899.2	0.106	+			7684	DLGSRKLE	8	52	459.25550794921656	916.4964629652331	2	459.2559509277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DLGSRKLE_	ENSG00000225526|ENST00000564146|MKRN2OS	37.15910966729921	0.6739408393984688	1				NaN	NaN	0	NaN	4498	3931	8426
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8432	27.387	NaN	1400.4	30	0	378.09	0.106			+	21979	KSEMGRAK	8	34	453.7467956542969	NaN	0	453.7467956542969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KSEMGRAK_	REV__ENSG00000012779|ENST00000374391|ALOX5;REV__nc|ENSG00000012779|P09917-2|ALOX5;REV__nc|ENSG00000012779|P09917-3|ALOX5;REV__nc|ENSG00000012779|P09917-5|ALOX5	33.51558372728122	1.7418937515398478	1				NaN	NaN	0	NaN	4499	3931	8426
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8433	27.389	NaN	1152.5	30	0	368.48	0.036			+	17214	HVGVMVSYLS	10	51	546.2810287607258	1090.5475045882515	2	546.78271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HVGVMVSYLS_	REV__nc|ENSG00000293416|E5RG02|PRSS46P	23.04248740728303	0.69165701907106	1				NaN	NaN	0	NaN	4500	3931	8426
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8439	27.405	NaN	5902.1	30	0	1414.5	0.214	+			37964	SPHGGALVM	9	53	434.7206502848391	867.4267476364782	2	434.7206726074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SPHGGALVM_	ENSG00000164880|ENST00000404767|INTS1	33.51558372728122	0.4900267029546261	1				NaN	NaN	0	NaN	4503	3934	8438
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8440	27.409	NaN	1467.4	30	0	433.39	0.106			+	23856	LDEDDQLGL	9	47	509.24050257097315	1016.4664522087463	2	509.2403564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LDEDDQLGL_	REV__nc|ENSG00000187091|P51178-2|PLCD1	27.882242232435846	0.5426732730940306	1				NaN	NaN	0	NaN	4504	3934	8438
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8441	27.411	NaN	1675.2	30	0	246.65	0.106	+			13592	GLVLLAHASQ	10	53	504.79588844676056	1007.5772239603211	2	504.7955627441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GLVLLAHASQ_	RADIL|p.G882Wfs*32|2|0.35|ENSG00000157927|chr7:4801852-4801853|-/G|frameshift_variant	45.97224482568171	0.49411383603842696	1				NaN	NaN	0	NaN	4505	3934	8438
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8442	27.413	NaN	1243.4	30	0	136.41	0.106			+	-1	GCLKKACHKL	10	47	579.3175659179688	NaN	0	579.3175659179688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_GC(Carbamidomethyl (C))LKKACHKL_	REV__ENST00000228506.7_1_12:121137175-121137400:+|nuORF	26.69291269510374	0.4125295221340092	1				NaN	NaN	0	NaN	4506	3934	8438
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8443	27.414	NaN	1189.3	30	0	208.84	0.106	+			8332	EAKQYAPAL	9	50	495.7663134405222	989.5180739478444	2	495.7664794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EAKQYAPAL_	ENST00000263253.8_1_22:41575130-41575280:+|nuORF	37.15910966729921	0.4535818937225704	1				NaN	NaN	0	NaN	4507	3934	8438
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8444	27.416	NaN	1707.1	30	0	314.22	0.036				-1	MQIPRFCY	8	49	557.7636432415485	NaN	0	557.7642822265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_MQIPRFC(Carbamidomethyl (C))Y_	ENSG00000023228|ENST00000233190|NDUFS1;nc|ENSG00000023228|P28331-2|NDUFS1;nc|ENSG00000023228|P28331-4|NDUFS1;NDUFS1|p.S363Ffs*4|1|0.21|ENSG00000023228|chr2:206142724-206142731|GGTGTCAG/-|frameshift_variant	33.51558372728122	1.7418937515398478	1				NaN	NaN	0	NaN	4508	3934	8438
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8453	27.436	NaN	5546	30	0	1536.3	0.214	+			43052	TELIQKAKL	9	57	348.55351066547513	NaN	0	348.553466796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TELIQKAKL_	ENSG00000134308|ENST00000238081|YWHAQ	49.536043120802724	0.20989033510253738	1				NaN	NaN	0	NaN	4514	3937	8452
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8454	27.44	NaN	3284.9	30	0	496.72	0.106	+			19865	KEELLKLT	8	65	487.29979537427135	972.5850378153427	2	487.3002014160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEELLKLT_	EIF4G2|p.S788Afs*15|1|0.36|ENSG00000110321|chr11:10799388-10799388|G/-|frameshift_variant;ENSG00000110321|ENST00000339995|EIF4G2;ENST00000532383.5_1_11:10821544-10823273:-|nuORF;nc|ENSG00000110321|P78344-2|EIF4G2;REV__ENSG00000187231|ENST00000428443|SESTD1;REV__SESTD1|p.G438Vfs*20|2|0.26|ENSG00000187231|chr2:179121901-179121901|T/-|frameshift_variant	101.25262130126117	0.2499877059228457	1				NaN	NaN	0	NaN	4515	3937	8452
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8455	27.442	NaN	2852.5	30	0	518.1	0.106			+	23557	LALAVNVPPGG	11	42	336.5341948950809	1006.5807552854426	3	336.53424072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LALAVNVPPGG_	REV__ENSG00000187730|ENST00000378585|GABRD;REV__GABRD|p.I415Hfs*14|1|0.24|ENSG00000187730|chr1:2030158-2030159|-/G|frameshift_variant	17.364965105453717	0.789179815757669	1				NaN	NaN	0	NaN	4516	3937	8452
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8456	27.444	NaN	2462.5	30	0	1308.8	0.106	+			17128	HSQLAEPQDLP	11	47	617.8082083375748	1233.6018637419495	2	617.8087768554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HSQLAEPQDLP_	ENSG00000121075|ENST00000644296|TBX4;nc|ENSG00000121075|P57082|TBX4;TBX4|p.P371Lfs*8|2|0.28|ENSG00000121075|chr17:61482984-61482984|C/-|frameshift_variant	18.262085536374414	0.7849791996189919	1				NaN	NaN	0	NaN	4517	3937	8452
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8457	27.445	NaN	1657	30	0	255.49	0.106	+			3559	ASTLVILRK	9	55	500.8287296407547	999.6429063483095	2	500.82928466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASTLVILRK_	ENSG00000176273|ENST00000427197|SLC35G1;nc|ENSG00000176273|Q2M3R5-2|SLC35G1	38.753607047826485	0.4348790777924195	1				NaN	NaN	0	NaN	4518	3937	8452
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8458	27.447	NaN	1965	30	0	325.91	0.106	+			46294	VEKAAAVSL	9	49	444.263350913305	886.51214889341	2	444.2630920410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VEKAAAVSL_	ENSG00000157827|ENST00000288670|FMNL2;ENSG00000161791|ENST00000335154|FMNL3;ENST00000549137.1_1_12:50039600-50046016:-|nuORF;nc|ENSG00000157827|Q96PY5|FMNL2;nc|ENSG00000161791|Q8IVF7-2|FMNL3;nc|ENSG00000161791|Q8IVF7|FMNL3	81.52500206392136	0.09095445986635249	1				NaN	NaN	0	NaN	4519	3937	8452
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8459	27.449	NaN	3728.4	30	0	373.06	0.035	+			1791	AIFKPVMSK	9	63	510.79931174573545	1019.5840705582709	2	510.79962158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AIFKPVMSK_	ENSG00000116478|ENST00000373548|HDAC1	74.1650062923329	0.12277912660386392	1				NaN	NaN	0	NaN	4520	3937	8452
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8470	27.473	NaN	5263.1	30	0	794.54	0.213				-1	TMDKSELVQK	10	76	610.8131513244118	1219.6117497156235	2	610.8133544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))TMDKSELVQK_	ENSG00000166913|ENST00000353703|YWHAB	126.24258497203832	0.01851300475414303	1				NaN	NaN	0	NaN	4528	3940	8469
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8471	27.476	NaN	3471.6	30	0	302.37	0.106	+			43051	TELIQKAKL	9	69	522.3264642089621	1042.638375484724	2	522.3268432617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TELIQKAKL_	ENSG00000134308|ENST00000238081|YWHAQ	75.04331003522576	0.118981335847003	1				NaN	NaN	0	NaN	4529	3940	8469
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8472	27.478	NaN	5632.7	30	0	1884.7	0.106	+			1792	AIFKPVMSK	9	47	340.86840348727225	1019.5833810620168	3	340.8683776855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AIFKPVMSK_	ENSG00000116478|ENST00000373548|HDAC1	28.081489160057373	0.5408112046645406	1				NaN	NaN	0	NaN	4530	3940	8469
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8473	27.48	NaN	1447	30	0	190.54	0.106			+	25180	LLYSCPGLA	9	45	468.7480674437099	NaN	0	468.747802734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LLYSCPGLA_	REV__ENSG00000230453|ENST00000684830|ANKRD18B	37.028477286268924	0.2906180391536832	1				NaN	NaN	0	NaN	4531	3940	8469
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8474	27.482	NaN	932.15	30	0	261.28	0.106	+			15574	GVGPLTHR	8	32	418.7386273904325	NaN	0	418.7386169433594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GVGPLTHR_	ENST00000588599.5_1_19:46194935-46195007:-|nuORF	21.70233525837049	1.7418937515398478	1				NaN	NaN	0	NaN	4532	3940	8469
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8475	27.484	NaN	1113	30	0	300.88	0.106			+	11592	FPRHESRG	8	45	329.17061413063567	NaN	0	329.20135498046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FPRHESRG_	REV__ENST00000450728.1_1_2:200334820-200335477:+|nuORF	19.359975847455235	1.7418937515398478	1				NaN	NaN	0	NaN	4533	3940	8469
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8476	27.485	NaN	1566.1	30	0	255.9	0.034	+			2053	ALAEATVALA	10	49	465.2685909864594	928.5226290397188	2	465.2685852050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ALAEATVALA_	ENSG00000085760|ENST00000263629|MTIF2;MTIF2|p.G590Efs*2|2|0.27|ENSG00000085760|chr2:55240114-55240114|T/-|frameshift_variant	53.351449002276354	0.42630798468005626	1				NaN	NaN	0	NaN	4534	3940	8469
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8484	27.504	NaN	4078.5	30	0	470.6	0.214	+			38085	SPTKRLTL	8	66	458.2846844735099	914.5548160138198	2	458.2844543457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SPTKRLTL_	ENSG00000103241|ENST00000262426|FOXF1	44.116797842482775	0.6307669463330267	1				NaN	NaN	0	NaN	4539	3943	8483
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8485	27.507	NaN	2847.1	30	0	592.96	0.106			+	51449	YVEKYPNK	8	61	520.7741638176349	1039.5337747020696	2	521.2753295898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YVEKYPNK_	REV__ENSG00000119772|ENST00000321117|DNMT3A;REV__nc|ENSG00000119772|Q9Y6K1-2|DNMT3A	30.503639358989545	0.7238069182250283	1				NaN	NaN	0	NaN	4540	3943	8483
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8486	27.509	NaN	3420	30	0	361.54	0.106	+			7059	CTLRKHKTN	9	69	550.805507462405	NaN	0	550.8052368164062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_CTLRKHKTN_	ENSG00000120149|ENST00000239243|MSX2;ENSG00000163132|ENST00000382723|MSX1	52.936696900407355	0.1864545979552969	1				NaN	NaN	0	NaN	4541	3943	8483
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8487	27.511	NaN	1602.8	30	0	153.51	0.106	+			45874	VANKEYVAY	9	49	528.7715607383626	1055.5285685435251	2	528.771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VANKEYVAY_	ENSG00000113719|ENST00000393784|ERGIC1;nc|ENSG00000113719|Q969X5-2|ERGIC1	37.15910966729921	0.4535818937225704	1				NaN	NaN	0	NaN	4542	3943	8483
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8488	27.513	NaN	1874.2	30	0	503.89	0.106			+	27397	MKPRRLPM	8	58	522.7953033980326	1043.5760538628651	2	523.2525634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_MKPRRLPM(Oxidation (M))_	REV__ENSG00000138162|ENST00000369005|TACC2;REV__nc|ENSG00000138162|O95359-1|TACC2;REV__nc|ENSG00000138162|O95359-3|TACC2;REV__nc|ENSG00000138162|O95359-5|TACC2;REV__nc|ENSG00000138162|O95359-6|TACC2;REV__TACC2|p.A2295T|1|0.22|ENSG00000138162|chr10:122211308-122211308|G/A|missense_variant	44.53106598305862	0.628196326904373	1				NaN	NaN	0	NaN	4543	3943	8483
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8489	27.515	NaN	1879.5	30	0	180.37	0.034	+			38188	SQEAKPYK	8	56	475.749755859375	NaN	0	475.749755859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SQEAKPYK_	ENSG00000166200|ENST00000388901|COPS2;nc|ENSG00000166200|P61201-2|COPS2	38.80614096846853	1.7418937515398478	1				NaN	NaN	0	NaN	4544	3943	8483
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8500	27.538	NaN	5398.8	30	0	637.33	0.214				-1	 	0	58	458.2320668035022	914.4495806738045	2	458.2320861816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	4552	3946	8499
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8501	27.542	NaN	5633.4	30	0	1048.3	0.106	+			3634	ASWGGTIEK	9	65	474.7427300247352	947.4709071162704	2	474.742919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASWGGTIEK_	ENSG00000144426|ENST00000683969|NBEAL1;NBEAL1|p.A1274Qfs*17|1|0.1|ENSG00000144426|chr2:203135766-203135766|A/-|frameshift_variant;NBEAL1|p.F1670Lfs*25|1|0.21|ENSG00000144426|chr2:203144843-203144843|T/-|frameshift_variant;NBEAL1|p.F2315Lfs*2|1|0.17|ENSG00000144426|chr2:203193900-203193900|T/-|frameshift_variant;NBEAL1|p.K2562Rfs*15|1|0.41|ENSG00000144426|chr2:203209306-203209306|A/-|frameshift_variant;NBEAL1|p.N2072Kfs*10|1|0.35|ENSG00000144426|chr2:203172825-203172826|-/A|frameshift_variant;NBEAL1|p.T1311Nfs*3|1|0.08|ENSG00000144426|chr2:203135875-203135876|-/A|frameshift_variant;nc|ENSG00000144426|Q6ZS30-1|NBEAL1;nc|ENSG00000144426|Q6ZS30|NBEAL1	62.107414245175825	0.1960472003779324	1				NaN	NaN	0	NaN	4553	3946	8499
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8502	27.544	NaN	2770.5	30	0	556.09	0.106	+			49871	VYTDCSNKL	9	59	521.7472814557177	1041.4800099782353	2	521.7485961914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYTDCSNKL_	ENSG00000183530|ENST00000327423|PRR14L;nc|ENSG00000183530|Q5THK1-2|PRR14L;nc|ENSG00000183530|Q5THK1-3|PRR14L;nc|ENSG00000183530|Q5THK1-4|PRR14L;PRR14L|p.L1550*|1|0.31|ENSG00000183530|chr22:31713190-31713190|A/-|frameshift_variant	42.86426827375447	0.38666266728046506	1				NaN	NaN	0	NaN	4554	3946	8499
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8503	27.546	NaN	2113.2	30	0	729.01	0.106			+	-1	QDMTEVMNP	9	46	540.7196231921118	1079.4246934510236	2	540.7201538085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_QDM(Oxidation (M))TEVMNP_	REV__ENSG00000060656|ENST00000373779|PTPRU;REV__ENST00000465525.6_1_1:29647190-29652170:+|nuORF;REV__nc|ENSG00000060656|Q92729-3|PTPRU;REV__nc|ENSG00000060656|Q92729-4|PTPRU;REV__nc|ENSG00000060656|Q92729|PTPRU;REV__TRNAU1AP-PTPRU|1|fusion;REV__TRNAU1AP-PTPRU|2|fusion;REV__TRNAU1AP-PTPRU|3|fusion	26.69291269510374	0.5537881896960711	1				NaN	NaN	0	NaN	4555	3946	8499
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8504	27.547	NaN	2264.4	30	0	251.15	0.106	+			24313	LFHPSNVEM	9	59	545.2548053482896	1088.495057763379	2	545.2562255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_LFHPSNVEM(Oxidation (M))_	ENSG00000151694|ENST00000310823|ADAM17	90.36981228632155	0.0638227155548745	1				NaN	NaN	0	NaN	4556	3946	8499
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8505	27.549	NaN	1070.7	30	0	132.42	0.106			+	42357	TAIEKSLKEL	10	38	566.3355102539062	NaN	0	566.3355102539062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TAIEKSLKEL_	REV__ENSG00000152818|ENST00000367545|UTRN;REV__nc|ENSG00000152818|P46939-2|UTRN;REV__UTRN|p.G3160*|1|0.03|ENSG00000152818|chr6:144821001-144821002|AG/-|frameshift_variant;REV__UTRN|p.K1847Ffs*66|1|0.07|ENSG00000152818|chr6:144516945-144516946|-/TTTAA|frameshift_variant;REV__UTRN|p.R3003Pfs*5|1|0.27|ENSG00000152818|chr6:144793915-144793916|-/C|frameshift_variant;REV__UTRN|p.T2422Hfs*35|1|0.47|ENSG00000152818|chr6:144557282-144557282|A/-|frameshift_variant	17.16674453292914	0.4201028297492154	1				NaN	NaN	0	NaN	4557	3946	8499
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8506	27.551	NaN	1543.8	30	0	473.54	0.036	+			18600	ISRNFSKLL	9	44	359.8858947753906	NaN	0	359.8858947753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ISRNFSKLL_	ENSG00000101916|ENST00000218032|TLR8;nc|ENSG00000101916|Q9NR97-2|TLR8;TLR8|p.N912Tfs*6|1|0.39|ENSG00000101916|chrX:12921771-12921771|A/-|frameshift_variant;TLR8|p.T437Kfs*11|1|0.07|ENSG00000101916|chrX:12920349-12920350|-/AGTTTGGAAG|frameshift_variant;TLR8|p.Y950Ifs*8|1|0.35|ENSG00000101916|chrX:12921881-12921882|-/A|frameshift_variant	27.882242232435846	0.3367954786602879	1				NaN	NaN	0	NaN	4558	3946	8499
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8513	27.569	NaN	6481.4	30	0	787.44	0.214	+			23314	KYQEVTNNL	9	63	554.7848569781381	1107.5551610230762	2	554.7857055664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KYQEVTNNL_	ENSG00000135387|ENST00000341394|CAPRIN1;nc|ENSG00000135387|Q14444-2|CAPRIN1	59.93077597824379	0.21419174904018318	1				NaN	NaN	0	NaN	4562	3949	8512
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8514	27.573	NaN	1151.1	30	0	284.1	0.034	+			38034	SPPLNLNPV	9	39	475.7686161333495	949.522679333499	2	477.26837158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SPPLNLNPV_	ENSG00000119471|ENST00000398805|HSDL2;ENST00000480881.1_1_9:115179142-115201087:+|nuORF	32.81241826257853	0.4965981579233955	1				NaN	NaN	0	NaN	4563	3949	8512
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8519	27.587	NaN	3897.3	30	0	404.52	0.214	+			6190	AVQQPFINK	9	69	522.7953033980326	1043.5760538628651	2	522.7955932617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVQQPFINK_	ENSG00000186260|ENST00000571589|MRTFB;nc|ENSG00000186260|Q9ULH7-4|MRTFB;nc|ENSG00000186260|Q9ULH7|MRTFB	76.7741389293348	0.11149722112137898	1				NaN	NaN	0	NaN	4565	3952	8518
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8520	27.591	NaN	2437.8	30	0	273.42	0.106	+			33089	RELAQQVQQV	10	59	599.8301725880889	1197.6457922429777	2	599.8304443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RELAQQVQQV_	DDX5|p.D424Ifs*31|1|0.03|ENSG00000108654|chr17:64500720-64500721|-/AAGCAATTAAT|frameshift_variant;DDX5|p.D572Nfs*6|1|0.04|ENSG00000108654|chr17:64500054-64500055|-/TGACAAGATAGTT|frameshift_variant;DDX5|p.R502Gfs*87|1|0.21|ENSG00000108654|chr17:64500264-64500264|T/-|frameshift_variant;ENSG00000100201|ENST00000403230|DDX17;ENSG00000108654|ENST00000225792|DDX5;ENST00000216019.11_1_22:38888049-38902242:-|nuORF;ENST00000432525.5_1_22:38886367-38903636:-|nuORF;ENST00000581230.5_1_17:62498125-62502378:-|nuORF;ENST00000583894.1_1_17:62499542-62500133:-|nuORF;nc|ENSG00000100201|Q92841-1|DDX17;nc|ENSG00000100201|Q92841-2|DDX17;nc|ENSG00000100201|Q92841-3|DDX17;nc|ENSG00000108654|P17844-2|DDX5	59.93077597824379	0.36646980200755325	1				NaN	NaN	0	NaN	4566	3952	8518
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8521	27.593	NaN	1942.7	30	0	367.82	0.106	+			7675	DLEKQHLK	8	56	505.78528915571343	1009.5560253782269	2	505.7848815917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DLEKQHLK_	CEP290|p.L2448Tfs*8|1|0.11|ENSG00000198707|chr12:88049282-88049283|-/T|frameshift_variant;ENSG00000198707|ENST00000552810|CEP290	44.116797842482775	0.6307669463330267	1				NaN	NaN	0	NaN	4567	3952	8518
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8522	27.595	NaN	1535.2	30	0	131.61	0.106			+	39000	SSSFVRNAI	9	51	490.76117599154253	979.5077990498851	2	490.7611083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSSFVRNAI_	REV__ENSG00000152620|ENST00000381937|NADK2;REV__nc|ENSG00000152620|Q4G0N4-2|NADK2;REV__nc|ENSG00000152620|Q4G0N4-3|NADK2	34.172542307311794	0.4838870758800184	1				NaN	NaN	0	NaN	4568	3952	8518
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8523	27.596	NaN	1257.3	30	0	224.89	0.106			+	37252	SKYSGNQI	8	37	448.7268590331387	895.4391651330774	2	448.7265930175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SKYSGNQI_	REV__ENSG00000163939|ENST00000707071|PBRM1;REV__nc|ENSG00000163939|Q86U86-2|PBRM1;REV__nc|ENSG00000163939|Q86U86-3|PBRM1;REV__nc|ENSG00000163939|Q86U86-4|PBRM1;REV__nc|ENSG00000163939|Q86U86-5|PBRM1;REV__nc|ENSG00000163939|Q86U86-6|PBRM1;REV__nc|ENSG00000163939|Q86U86-7|PBRM1;REV__nc|ENSG00000163939|Q86U86-8|PBRM1;REV__nc|ENSG00000163939|Q86U86-9|PBRM1;REV__nc|ENSG00000163939|Q86U86|PBRM1;REV__PBRM1|p.H1521Pfs*95|1|0.12|ENSG00000163939|chr3:52554771-52554772|-/G|frameshift_variant;REV__PBRM1|p.I279Yfs*4|1|0.34|ENSG00000163939|chr3:52644768-52644768|T/-|frameshift_variant;REV__PBRM1|p.K991Nfs*23|1|0.28|ENSG00000163939|chr3:52587503-52587503|T/-|frameshift_variant;REV__PBRM1|p.L1349Wfs*35|1|0.5|ENSG00000163939|chr3:52563324-52563324|G/-|frameshift_variant;REV__PBRM1|p.N955Tfs*59|2|0.31|ENSG00000163939|chr3:52589171-52589171|T/-|frameshift_variant	24.20275056022122	0.7724576178584145	1				NaN	NaN	0	NaN	4569	3952	8518
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8524	27.598	NaN	1720.6	30	0	226.01	0.106	+			14730	GTISSMYQTK	10	58	558.2729465784234	1114.5313402236468	2	558.2745361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTISSMYQTK_	ENSG00000135926|ENST00000258412|TMBIM1	24.231819034082204	0.6819444564287812	1				NaN	NaN	0	NaN	4570	3952	8518
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8525	27.6	NaN	1199.9	30	0	99.498	0.034	+			75	AAAYPHTSL	9	53	465.7370568052051	NaN	0	465.7369689941406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AAAYPHTSL_	ENSG00000142599|ENST00000400908|RERE;nc|ENSG00000142599|Q9P2R6-2|RERE;RERE|p.Q899L|1|0.36|ENSG00000142599|chr1:8360811-8360811|T/A|missense_variant;RERE|p.S1084Rfs*173|1|0.21|ENSG00000142599|chr1:8360258-8360258|C/-|frameshift_variant;RERE|p.T1358Dfs*37|1|0.36|ENSG00000142599|chr1:8358464-8358465|-/G|frameshift_variant	50.0245360154114	0.20652386741182333	1				NaN	NaN	0	NaN	4571	3952	8518
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8533	27.618	NaN	27823	30	0	11634	0.214	+			15239	GTTAVFINK	9	67	475.7686161333495	949.522679333499	2	475.7686462402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTTAVFINK_	ASH1L|p.H1793Ifs*7|1|0.13|ENSG00000116539|chr1:155438778-155438778|G/-|frameshift_variant;ASH1L|p.I970Lfs*9|1|0.2|ENSG00000116539|chr1:155479962-155479962|T/-|frameshift_variant;ASH1L|p.K1222Rfs*11|4|0.27|ENSG00000116539|chr1:155479205-155479205|T/-|frameshift_variant;ASH1L|p.K1533Sfs*17|1|0.25|ENSG00000116539|chr1:155478272-155478272|T/-|frameshift_variant;ASH1L|p.K2377Nfs*5|1|0.28|ENSG00000116539|chr1:155354570-155354570|T/-|frameshift_variant;ASH1L|p.N1822Tfs*2|1|0.33|ENSG00000116539|chr1:155438690-155438690|T/-|frameshift_variant;ASH1L|p.R712Efs*23|3|0.35|ENSG00000116539|chr1:155480736-155480736|T/-|frameshift_variant;ASH1L|p.S2309Ifs*11|1|0.64|ENSG00000116539|chr1:155357635-155357636|-/T|frameshift_variant;ENSG00000116539|ENST00000392403|ASH1L;nc|ENSG00000116539|Q9NR48|ASH1L	118.74307786436346	0.02196067127630568	1				NaN	NaN	0	NaN	4576	3955	8532
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8534	27.622	NaN	4427.3	30	0	812.92	0.106	+			17903	IGGAWFDD	8	58	440.6954030259392	879.3762531186784	2	440.6952209472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IGGAWFDD_	ENST00000470499.1_1_3:131895005-131895206:+|nuORF	44.53106598305862	0.628196326904373	1				NaN	NaN	0	NaN	4577	3955	8532
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8535	27.624	NaN	3290.1	30	0	626.18	0.106	+			47091	VLKVLSSLK	9	69	493.834008745683	985.653464558166	2	493.83416748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VLKVLSSLK_	DIDO1|p.G1745Afs*119|1|0.26|ENSG00000101191|chr20:62880722-62880722|C/-|frameshift_variant;DIDO1|p.P1738Hfs*126|1|0.39|ENSG00000101191|chr20:62880743-62880743|G/-|frameshift_variant;DIDO1|p.S1285Afs*76|1|0.39|ENSG00000101191|chr20:62882104-62882104|G/-|frameshift_variant;ENSG00000101191|ENST00000395343|DIDO1	62.107414245175825	0.1960472003779324	1				NaN	NaN	0	NaN	4578	3955	8532
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8536	27.626	NaN	2438.2	30	0	233.3	0.106			+	10052	ESELIKEF	8	60	497.75883168344274	NaN	0	497.7584228515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ESELIKEF_	REV__ENSG00000146005|ENST00000274710|PSD2;REV__PSD2|p.A139T|2|0.18|ENSG00000146005|chr5:139813352-139813352|G/A|missense_variant;REV__PSD2|p.A211Qfs*25|1|0.28|ENSG00000146005|chr5:139813564-139813564|G/-|frameshift_variant;REV__PSD2|p.D258Mfs*13|2|0.49|ENSG00000146005|chr5:139813703-139813703|G/-|frameshift_variant	42.396135135203025	1.7418937515398478	1				NaN	NaN	0	NaN	4579	3955	8532
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8537	27.627	NaN	2233.1	30	0	753.74	0.106				-1	LTMAEYFLE	9	52	566.7639724487742	1131.5133919643483	2	566.7638549804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_LTM(Oxidation (M))AEYFLE_	ANKRD50|p.G1144Wfs*12|1|0.39|ENSG00000151458|chr4:124669847-124669848|-/A|frameshift_variant;ANKRD50|p.N1088Mfs*6|1|0.42|ENSG00000151458|chr4:124670014-124670014|T/-|frameshift_variant;ANKRD50|p.P1235Hfs*8|2|0.36|ENSG00000151458|chr4:124669573-124669573|G/-|frameshift_variant;ENSG00000151458|ENST00000504087|ANKRD50;nc|ENSG00000151458|Q9ULJ7-2|ANKRD50	30.503639358989545	0.5181749237905803	1				NaN	NaN	0	NaN	4580	3955	8532
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8538	27.629	NaN	1442.3	30	0	152.02	0.036	+			738	AEAYLGKTVT	10	49	526.7850597108169	1051.5555664884337	2	526.7857666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEAYLGKTVT_	ENSG00000109971|ENST00000534624|HSPA8;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;ENST00000456928.2_1_12:4206979-4207195:+|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;HSPA8|p.K569Dfs*6|1|0.3|ENSG00000109971|chr11:123058302-123058303|TC/-|frameshift_variant;nc|ENSG00000109971|P11142-2|HSPA8	36.31764250033197	0.5830761606467809	1				NaN	NaN	0	NaN	4581	3955	8532
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8546	27.647	NaN	2901.4	30	0	944.41	0.214	+			38914	SSPQPGSAL	9	43	422.2140094986511	842.4134660641022	2	422.2138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSPQPGSAL_	ARID1A|p.A1077Gfs*28|1|0.28|ENSG00000117713|chr1:26771148-26771149|-/G|frameshift_variant;ARID1A|p.F2141Sfs*59|5|0.26|ENSG00000117713|chr1:26780313-26780313|C/-|frameshift_variant;ARID1A|p.K1072Nfs*21|3|0.25|ENSG00000117713|chr1:26771131-26771131|A/-|frameshift_variant;ARID1A|p.K1161Sfs*19|1|0.29|ENSG00000117713|chr1:26772573-26772573|A/-|frameshift_variant;ARID1A|p.M1564Hfs*8|1|0.18|ENSG00000117713|chr1:26774910-26774911|-/C|frameshift_variant;ARID1A|p.N1475Tfs*6|1|0.36|ENSG00000117713|chr1:26774648-26774648|A/-|frameshift_variant;ARID1A|p.P1115Qfs*46|1|0.32|ENSG00000117713|chr1:26771260-26771260|C/-|frameshift_variant;ARID1A|p.P1326Rfs*155|1|0.15|ENSG00000117713|chr1:26773685-26773685|C/-|frameshift_variant;ARID1A|p.P1406Rfs*37|1|0.42|ENSG00000117713|chr1:26774444-26774448|CCCCA/-|frameshift_variant;ARID1A|p.P1568Lfs*44|1|0.14|ENSG00000117713|chr1:26774926-26774926|C/-|frameshift_variant;ARID1A|p.P1575Hfs*37|1|0.38|ENSG00000117713|chr1:26774947-26774947|C/-|frameshift_variant;ARID1A|p.P2114Rfs*21|1|0.46|ENSG00000117713|chr1:26780236-26780236|C/-|frameshift_variant;ARID1A|p.V2244Gfs*34|1|0.31|ENSG00000117713|chr1:26780626-26780627|-/G|frameshift_variant;ENSG00000117713|ENST00000324856|ARID1A;nc|ENSG00000117713|O14497-2|ARID1A;nc|ENSG00000117713|O14497-3|ARID1A	65.46538089061403	0.16805504838372562	1				NaN	NaN	0	NaN	4586	3958	8545
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8547	27.651	NaN	3083.4	30	0	481.22	0.106			+	-1	CAGCTHHCE	9	67	537.6800778872033	1073.3456028412065	2	537.6814575195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))AGC(Carbamidomethyl (C))THHCE_	REV__PCSK6|p.T854A|1|0.62|ENSG00000140479|chr15:101318328-101318328|T/C|missense_variant	17.364965105453717	0.6112419832031293	1				NaN	NaN	0	NaN	4587	3958	8545
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8548	27.653	NaN	1513.7	30	0	224.73	0.106			+	46009	VAVHLPTL	8	45	425.26302718646855	848.5115014397371	2	425.2630310058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VAVHLPTL_	REV__ENSG00000029534|ENST00000289734|ANK1;REV__KIAA0146-ANK1|1|fusion;REV__KIAA0146-ANK1|2|fusion;REV__KIAA0146-ANK1|3|fusion;REV__KIAA0146-ANK1|4|fusion;REV__KIAA0146-ANK1|5|fusion;REV__nc|ENSG00000029534|P16157-10|ANK1;REV__nc|ENSG00000029534|P16157-11|ANK1;REV__nc|ENSG00000029534|P16157-12|ANK1;REV__nc|ENSG00000029534|P16157-13|ANK1;REV__nc|ENSG00000029534|P16157-14|ANK1;REV__nc|ENSG00000029534|P16157-15|ANK1;REV__nc|ENSG00000029534|P16157-16|ANK1;REV__nc|ENSG00000029534|P16157-2|ANK1;REV__nc|ENSG00000029534|P16157-21|ANK1;REV__nc|ENSG00000029534|P16157-4|ANK1;REV__nc|ENSG00000029534|P16157-5|ANK1;REV__nc|ENSG00000029534|P16157-6|ANK1;REV__nc|ENSG00000029534|P16157-7|ANK1;REV__nc|ENSG00000029534|P16157-8|ANK1;REV__nc|ENSG00000029534|P16157-9|ANK1;REV__nc|ENSG00000029534|P16157|ANK1	28.2542754592877	0.7411748056684583	1				NaN	NaN	0	NaN	4588	3958	8545
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8549	27.655	NaN	1182.1	30	0	136.9	0.106			+	-1	VGEKQGQGSNS	11	39	378.1783142089844	NaN	0	378.1783142089844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))VGEKQGQGSNS_	REV__ADRA2B|p.P278S|1|0.36|ENSG00000274286|chr2:96115318-96115318|G/A|missense_variant	20.83715455343099	0.456735970842152	1				NaN	NaN	0	NaN	4589	3958	8545
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8550	27.657	NaN	1768.7	30	0	406.9	0.106			+	-1	SDTMGLVE	8	45	434.1929197252007	866.3712865172014	2	434.1928405761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_SDTM(Oxidation (M))GLVE_	REV__ENSG00000100290|ENST00000216115|BIK	38.80614096846853	0.6637206697844082	1				NaN	NaN	0	NaN	4590	3958	8545
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8551	27.658	NaN	1936.2	30	0	259.48	0.106	+			12823	GENDRGVSF	9	53	490.7251247891952	979.4356966451904	2	490.7247619628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GENDRGVSF_	ENSG00000172531|ENST00000376745|PPP1CA;ENSG00000186298|ENST00000335007|PPP1CC;ENSG00000213639|ENST00000395366|PPP1CB;ENST00000462832.5_1_2:29006774-29038903:+|nuORF;ENST00000526510.5_1_11:67166008-67168740:-|nuORF;ENST00000532279.1_1_11:67166350-67167062:-|nuORF;ENST00000532446.5_1_11:67166008-67168991:-|nuORF;nc|ENSG00000172531|P62136-2|PPP1CA;nc|ENSG00000172531|P62136-3|PPP1CA;nc|ENSG00000186298|P36873-2|PPP1CC	58.22992032128504	0.22837015374068087	1				NaN	NaN	0	NaN	4591	3958	8545
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8552	27.66	NaN	1710.3	30	0	437.85	0.035			+	19348	KAKPPAPLGE	10	51	504.2978011513562	1006.5810493695125	2	504.2976989746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KAKPPAPLGE_	REV__ENSG00000268041|ENST00000597630|ERFL	32.81241826257853	0.6118718159329168	1				NaN	NaN	0	NaN	4592	3958	8545
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8565	27.688	NaN	11633	30	0	2198.7	0.213	+			48194	VTAKELSLVNK	11	82	601.3612543166496	1200.707955700099	2	601.3614501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTAKELSLVNK_	ENSG00000050405|ENST00000341247|LIMA1;LIMA1|p.T536Lfs*38|2|0.4|ENSG00000050405|chr12:50177739-50177739|G/-|frameshift_variant;nc|ENSG00000050405|Q9UHB6-4|LIMA1	132.86201258240888	0.0010753258230121613	1				NaN	NaN	0	NaN	4602	3961	8564
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8566	27.692	NaN	6980.7	30	0	2614.7	0.106	+			16541	HEVMEQQTL	9	54	557.7629970147735	1113.511441096347	2	557.7642822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HEVMEQQTL_	ENSG00000104738|ENST00000649973|MCM4;MCM4|p.T629Qfs*18|2|0.31|ENSG00000104738|chr8:47971419-47971419|A/-|frameshift_variant	66.96192283764107	0.15557981141143568	1				NaN	NaN	0	NaN	4603	3961	8564
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8567	27.694	NaN	2328.5	30	0	782.93	0.106				-1	 	0	48	343.1988976962893	684.3832424593786	2	343.1988830566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	4604	3961	8564
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8568	27.695	NaN	1599.7	30	0	247.5	0.106			+	21012	KKHIAQLA	8	42	454.7874313535286	907.5603097738572	2	454.787353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KKHIAQLA_	REV__VCP|p.R424H|1|0.37|ENSG00000165280|chr9:35061103-35061103|C/T|missense_variant	26.79610172149135	0.7524337208463756	1				NaN	NaN	0	NaN	4605	3961	8564
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8569	27.697	NaN	2254.2	30	0	819.12	0.106			+	38344	SRLHRILY	8	44	529.3166027729928	1056.6186526127856	2	529.3165283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SRLHRILY_	REV__ENSG00000188321|ENST00000603380|ZNF559	18.324413293986947	0.7971860551947066	1				NaN	NaN	0	NaN	4606	3961	8564
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8570	27.699	NaN	1245.3	30	0	190.59	0.037	+			17867	IFVAFFSDTK	10	50	587.8097534179688	NaN	0	587.8097534179688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IFVAFFSDTK_	ENSG00000144407|ENST00000272847|PTH2R;PTH2R|p.L281Ifs*27|1|0.05|ENSG00000144407|chr2:208444874-208444875|-/ATATTAGAACACT|frameshift_variant	26.063383197487333	0.4145965855542893	1				NaN	NaN	0	NaN	4607	3961	8564
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8580	27.722	NaN	2137.1	30	0	405.67	0.214	+			45517	TYHPPGQTF	9	55	524.2483807325508	1046.4822085319015	2	524.2487182617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TYHPPGQTF_	FCGBP-ACSS2|1|fusion;nc|ENSG00000275395|Q9Y6R7|FCGBP	52.936696900407355	0.27249468807391813	1				NaN	NaN	0	NaN	4614	3964	8579
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8581	27.726	NaN	1939.3	30	0	359.81	0.106	+			29308	NYNNQSSNF	9	50	544.225328068159	1086.436103203118	2	544.225341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NYNNQSSNF_	chr12:54282662-54282800|482|460.96|0.0|25.46|+|ENST00000677249|HNRNPA1,HNRNPA1;ENSG00000135486|ENST00000340913|HNRNPA1;ENSG00000139675|ENST00000357495|HNRNPA1L2;ENSG00000224578|ENST00000565308|HNRNPA1L3;ENST00000411857.2_1_1:179425361-179425934:-|nuORF;ENST00000432375.1_1_6:32293532-32293889:+|nuORF;ENST00000444886.1_1_9:128358610-128358904:+|nuORF;nc|ENSG00000135486|P09651-2|HNRNPA1;nc|ENSG00000135486|P09651-3|HNRNPA1	60.11826168202944	0.21262886028301267	1				NaN	NaN	0	NaN	4615	3964	8579
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8582	27.728	NaN	2579.2	30	0	1297.6	0.106			+	16706	HLAISLGIAS	10	42	327.86239427175593	980.5653534154678	3	327.8623352050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HLAISLGIAS_	REV__CON__Q3ZBD7;REV__ENSG00000105220|ENST00000356487|GPI;REV__ENST00000586392.1_1_19:34884173-34884275:+|nuORF;REV__GPI|p.E382Sfs*20|1|0.52|ENSG00000105220|chr19:34396377-34396377|G/-|frameshift_variant;REV__nc|ENSG00000105220|P06744-2|GPI	17.364965105453717	0.7282106878714807	1				NaN	NaN	0	NaN	4616	3964	8579
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8583	27.73	NaN	1350.9	30	0	185.37	0.106	+			28690	NMKSRCTAK	9	53	519.7647710251138	1037.5149891170274	2	519.7650756835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NMKSRCTAK_	ENST00000484697.5_1_1:46871424-46877830:+|nuORF	41.42661286455405	0.403525789677298	1				NaN	NaN	0	NaN	4617	3964	8579
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8584	27.732	NaN	1589.6	30	0	272.85	0.037			+	-1	MCSYGVAKFQ	10	58	575.2562255859375	NaN	0	575.2562255859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_M(Oxidation (M))CSYGVAKFQ_	REV__NUP54|p.R172Q|1|0.32|ENSG00000138750|chr4:76136193-76136193|C/T|missense_variant	36.446750945000026	0.3805027428805705	1				NaN	NaN	0	NaN	4618	3964	8579
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8595	27.757	NaN	3180.8	30	0	308.65	0.214	+			21533	KNSLKVAAIS	10	59	515.8165000949735	1029.618447256747	2	515.8167724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KNSLKVAAIS_	ENSG00000122420|ENST00000370757|PTGFR	49.536043120802724	0.461275219792494	1				NaN	NaN	0	NaN	4626	3967	8594
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8596	27.761	NaN	2359	30	0	256.4	0.106	+			51593	YYQDTPKQI	9	60	578.2874874500934	1154.5604219669867	2	578.288818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YYQDTPKQI_	ENSG00000048162|ENST00000614830|NOP16	93.1432384553994	0.056003526918089595	1				NaN	NaN	0	NaN	4627	3967	8594
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8597	27.763	NaN	1336.7	30	0	259.64	0.106				-1	GTMTGMLYK	9	51	509.24065582508774	1016.4667587169755	2	509.240966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_GTMTGM(Oxidation (M))LYK_	ENSG00000178440|ENST00000651763|TIMM23B-AGAP6;ENSG00000204152|ENST00000651259|TIMM23B;ENSG00000265354|ENST00000580018|TIMM23;nc|ENSG00000204152|Q5SRD1-2|TIMM23B	37.81151784470057	0.4459294069877048	1				NaN	NaN	0	NaN	4628	3967	8594
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8598	27.765	NaN	3437.2	30	0	391.56	0.106	+			41796	SVSQPIMVQR	10	67	572.8104314196063	1143.6063099060125	2	573.3143920898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVSQPIMVQR_	ENSG00000134644|ENST00000426105|PUM1;nc|ENSG00000134644|Q14671-2|PUM1;nc|ENSG00000134644|Q14671|PUM1	93.44185321454538	0.11136857881027329	1				NaN	NaN	0	NaN	4629	3967	8594
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8599	27.766	NaN	1975.4	30	0	329.53	0.106	+			1881	AILTTVTQK	9	55	487.79750503449014	973.5804571357803	2	487.79803466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AILTTVTQK_	ENSG00000198677|ENST00000358746|SKIC3;ENST00000513232.1_1_5:94857997-94861145:-|nuORF	62.107414245175825	0.1960472003779324	1				NaN	NaN	0	NaN	4630	3967	8594
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8600	27.768	NaN	2780.8	30	0	521.1	0.033	+			15361	GTVVGLVNK	9	55	443.77149273898266	885.5284325447653	2	443.7714538574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTVVGLVNK_	ASH1L|p.H1793Ifs*7|1|0.13|ENSG00000116539|chr1:155438778-155438778|G/-|frameshift_variant;ASH1L|p.I970Lfs*9|1|0.2|ENSG00000116539|chr1:155479962-155479962|T/-|frameshift_variant;ASH1L|p.K1222Rfs*11|4|0.27|ENSG00000116539|chr1:155479205-155479205|T/-|frameshift_variant;ASH1L|p.K1533Sfs*17|1|0.25|ENSG00000116539|chr1:155478272-155478272|T/-|frameshift_variant;ASH1L|p.K2377Nfs*5|1|0.28|ENSG00000116539|chr1:155354570-155354570|T/-|frameshift_variant;ASH1L|p.N1822Tfs*2|1|0.33|ENSG00000116539|chr1:155438690-155438690|T/-|frameshift_variant;ASH1L|p.R712Efs*23|3|0.35|ENSG00000116539|chr1:155480736-155480736|T/-|frameshift_variant;ASH1L|p.S2309Ifs*11|1|0.64|ENSG00000116539|chr1:155357635-155357636|-/T|frameshift_variant;ENSG00000116539|ENST00000392403|ASH1L;nc|ENSG00000116539|Q9NR48|ASH1L	74.25504064058377	0.12238981753128622	1				NaN	NaN	0	NaN	4631	3967	8594
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8607	27.786	NaN	4179.3	30	0	997.25	0.214	+			11652	FQHVGQTL	8	63	465.2456690115908	928.4767850899816	2	465.245361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FQHVGQTL_	ENSG00000112159|ENST00000369393|MDN1;MDN1|p.L4077Cfs*15|1|0.16|ENSG00000112159|chr6:89680625-89680625|G/-|frameshift_variant;MDN1|p.L5278Ffs*6|1|0.18|ENSG00000112159|chr6:89652273-89652274|-/A|frameshift_variant	76.7741389293348	0.3504530765139327	1				NaN	NaN	0	NaN	4635	3970	8606
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8608	27.79	NaN	4655	30	0	956.3	0.106	+			20310	KEQELQQTL	9	64	558.7978189004957	1115.5810848677913	2	558.798583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEQELQQTL_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	81.52500206392136	0.09095445986635249	1				NaN	NaN	0	NaN	4636	3970	8606
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8609	27.792	NaN	4623.7	30	0	505.78	0.106	+			15362	GTVVGLVNK	9	52	443.77149273898266	885.5284325447653	2	443.7713317871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTVVGLVNK_	ASH1L|p.H1793Ifs*7|1|0.13|ENSG00000116539|chr1:155438778-155438778|G/-|frameshift_variant;ASH1L|p.I970Lfs*9|1|0.2|ENSG00000116539|chr1:155479962-155479962|T/-|frameshift_variant;ASH1L|p.K1222Rfs*11|4|0.27|ENSG00000116539|chr1:155479205-155479205|T/-|frameshift_variant;ASH1L|p.K1533Sfs*17|1|0.25|ENSG00000116539|chr1:155478272-155478272|T/-|frameshift_variant;ASH1L|p.K2377Nfs*5|1|0.28|ENSG00000116539|chr1:155354570-155354570|T/-|frameshift_variant;ASH1L|p.N1822Tfs*2|1|0.33|ENSG00000116539|chr1:155438690-155438690|T/-|frameshift_variant;ASH1L|p.R712Efs*23|3|0.35|ENSG00000116539|chr1:155480736-155480736|T/-|frameshift_variant;ASH1L|p.S2309Ifs*11|1|0.64|ENSG00000116539|chr1:155357635-155357636|-/T|frameshift_variant;ENSG00000116539|ENST00000392403|ASH1L;nc|ENSG00000116539|Q9NR48|ASH1L	118.74307786436346	0.02196067127630568	1				NaN	NaN	0	NaN	4637	3970	8606
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8610	27.793	NaN	1705.4	30	0	387.21	0.106			+	43779	TLKEQKSF	8	52	490.77387082699437	979.5331887207888	2	490.7737121582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TLKEQKSF_	REV__ENSG00000125648|ENST00000301454|SLC25A23;REV__nc|ENSG00000125648|Q9BV35-2|SLC25A23;REV__nc|ENSG00000125648|Q9BV35-3|SLC25A23;REV__nc|ENSG00000125648|Q9BV35-4|SLC25A23;REV__SLC25A23|p.E174K|1|0.35|ENSG00000125648|chr19:6454681-6454681|C/T|missense_variant;REV__SLC25A23|p.R432Gfs*12|1|0.08|ENSG00000125648|chr19:6442088-6442088|G/-|frameshift_variant	31.529811441608018	0.715883593221515	1				NaN	NaN	0	NaN	4638	3970	8606
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8611	27.795	NaN	1641.6	30	0	254.04	0.106	+			47608	VRTVTAFTL	9	30	336.5341948950809	1006.5807552854426	3	336.5342712402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VRTVTAFTL_	ENSG00000186513|ENST00000641291|OR9Q2	19.359975847455235	0.6112419832031293	1				NaN	NaN	0	NaN	4639	3970	8606
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8612	27.797	NaN	1494.6	30	0	185.67	0.106				-1	PMHPLQSTSGM	11	59	609.2681414182663	1216.5217299033325	2	609.268310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Oxidation (M)	_PM(Oxidation (M))HPLQSTSGM(Oxidation (M))_	ENSG00000166268|ENST00000552032|MYRFL	32.81241826257853	0.645615689454792	1				NaN	NaN	0	NaN	4640	3970	8606
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8613	27.799	NaN	1404.7	30	0	178.23	0.035			+	-1	SPVCWWSL	8	49	517.7431152596982	1033.4716775861964	2	517.742919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_SPVC(Carbamidomethyl (C))WWSL_	REV__ENST00000248121.6_1_16:2043508-2043775:+|nuORF	37.028477286268924	0.6747514403204248	1				NaN	NaN	0	NaN	4641	3970	8606
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8622	27.82	NaN	7128.1	30	0	3622.2	0.214	+			41501	SVPISKSTL	9	58	466.2764894860162	930.5384260388324	2	466.2763366699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVPISKSTL_	ENSG00000138162|ENST00000369005|TACC2;nc|ENSG00000138162|O95359-1|TACC2;nc|ENSG00000138162|O95359-3|TACC2;nc|ENSG00000138162|O95359-5|TACC2;nc|ENSG00000138162|O95359-6|TACC2;TACC2|p.V2229Cfs*22|1|0.07|ENSG00000138162|chr10:122211108-122211109|-/A|frameshift_variant	51.19269402634007	0.2889735674168909	1				NaN	NaN	0	NaN	4647	3973	8621
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8623	27.824	NaN	3580	30	0	538.11	0.106			+	28986	NSLKNYGLQ	9	56	518.7747238574116	1035.534894781623	2	518.775146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NSLKNYGLQ_	REV__ENSG00000166897|ENST00000402918|ELFN2	40.77816245573522	0.41113185337114944	1				NaN	NaN	0	NaN	4648	3973	8621
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8624	27.826	NaN	1281.8	30	0	84.152	0.106	+			46029	VAVTRPVT	8	48	421.7583509806138	841.5021490280276	2	421.7582092285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VAVTRPVT_	ENSG00000006118|ENST00000453848|TMEM132A;nc|ENSG00000006118|Q24JP5-2|TMEM132A;nc|ENSG00000006118|Q24JP5-3|TMEM132A;nc|ENSG00000006118|Q24JP5-4|TMEM132A;TMEM132A|p.L494Cfs*82|1|0.14|ENSG00000006118|chr11:60933660-60933660|C/-|frameshift_variant;TMEM132A|p.R959Gfs*5|1|0.33|ENSG00000006118|chr11:60936704-60936704|G/-|frameshift_variant;TMEM132A|p.V473Cfs*16|1|0.43|ENSG00000006118|chr11:60933597-60933597|G/-|frameshift_variant	44.116797842482775	0.6307669463330267	1				NaN	NaN	0	NaN	4649	3973	8621
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8625	27.828	NaN	1790.3	30	0	476.76	0.106			+	8071	DVNLNTLK	8	47	458.7583719174839	915.5021909017678	2	458.758056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DVNLNTLK_	REV__ENSG00000180900|ENST00000356994|SCRIB;REV__nc|ENSG00000180900|Q14160-2|SCRIB;REV__nc|ENSG00000180900|Q14160|SCRIB;REV__SCRIB|p.A803Pfs*121|1|0.21|ENSG00000180900|chr8:143805375-143805375|C/-|frameshift_variant;REV__SCRIB|p.T966Pfs*9|4|0.48|ENSG00000180900|chr8:143804682-143804682|G/-|frameshift_variant	45.9519527083369	0.6193794311207887	1				NaN	NaN	0	NaN	4650	3973	8621
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8626	27.83	NaN	1687.3	30	0	276.08	0.106	+			13919	GRMHAPGKGL	10	55	533.2870030942354	1064.5594532552707	2	533.28759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))GRMHAPGKGL_	ENSG00000110700|ENST00000525634|RPS13;ENST00000528074.1_1_11:17098819-17099188:-|nuORF;ENST00000534329.1_1_11:17098694-17099257:-|nuORF	42.396135135203025	0.5270658956260207	1				NaN	NaN	0	NaN	4651	3973	8621
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8627	27.831	NaN	1831.4	30	0	324.07	0.106	+			10305	ETQLQAALL	9	53	493.77922840545125	985.5439038777025	2	493.7793273925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ETQLQAALL_	ENSG00000183246|ENST00000433039|RIMBP3C;ENSG00000274600|ENST00000620804|RIMBP3B;ENSG00000275793|ENST00000619918|RIMBP3;RIMBP3B|p.G1589Afs*9|1|0.16|ENSG00000274600|chr22:21388619-21388619|G/-|frameshift_variant	47.657333605630114	0.33044192980041115	1				NaN	NaN	0	NaN	4652	3973	8621
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8628	27.833	NaN	1693.2	30	0	159.89	0.035	+			13128	GGLALLLLGVA	11	56	498.826340640112	995.638128347024	2	498.8260803222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GGLALLLLGVA_	EFNB3|p.G279Vfs*15|1|0.44|ENSG00000108947|chr17:7709384-7709384|G/-|frameshift_variant;ENSG00000108947|ENST00000226091|EFNB3	24.20275056022122	0.7359240821686345	1				NaN	NaN	0	NaN	4653	3973	8621
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8635	27.851	NaN	5241.1	30	0	825.04	0.214			+	42353	TAHNLLVLQ	9	62	504.79428970921776	1007.5740264852355	2	504.7906188964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAHNLLVLQ_	REV__ENST00000420886.6_1_12:123812326-123812447:-|nuORF	37.81151784470057	0.4459294069877048	1				NaN	NaN	0	NaN	4657	3976	8634
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8636	27.855	NaN	2667.6	30	0	300.65	0.106	+			46164	VDVEQHTL	8	54	470.7391560125658	939.4637590919316	2	470.7394714355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VDVEQHTL_	ENSG00000134057|ENST00000256442|CCNB1;ENSG00000157456|ENST00000288207|CCNB2;nc|ENSG00000134057|P14635-2|CCNB1	62.107414245175825	0.4809183816468817	1				NaN	NaN	0	NaN	4658	3976	8634
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8637	27.857	NaN	1478.2	30	0	358.6	0.106	+			28989	NSLVNLYLQ	9	50	532.2930007893938	1062.5714486455875	2	532.745361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NSLVNLYLQ_	ENSG00000087086|ENST00000331825|FTL;FTL|p.K143Ifs*9|1|0.37|ENSG00000087086|chr19:48966629-48966630|-/TATCA|frameshift_variant	40.77816245573522	0.41113185337114944	1				NaN	NaN	0	NaN	4659	3976	8634
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8638	27.858	NaN	715.27	30	0	104.65	0.106				-1	CGSSCCSCCW	10	34	384.7720642488212	NaN	0	384.77227783203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_CGSSCCSC(Carbamidomethyl (C))C(Carbamidomethyl (C))W_	ENST00000228741.7_1_12:96588285-96617411:+|nuORF	3.843417207794947	0.4201028297492154	1				NaN	NaN	0	NaN	4660	3976	8634
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8639	27.86	NaN	1492.4	30	0	258.32	0.036			+	18672	ISYLHPGTVD	10	46	551.2844903846706	NaN	0	551.2854614257812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ISYLHPGTVD_	REV__ENSG00000136930|ENST00000259457|PSMB7	25.57405402267927	0.4162033004763879	1				NaN	NaN	0	NaN	4661	3976	8634
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8650	27.886	NaN	3219.6	30	0	495.3	0.214				-1	IRPPGKCML	9	68	544.2903185078131	1086.5660840824262	2	544.2908325195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_IRPPGKC(Carbamidomethyl (C))M(Oxidation (M))L_	ENST00000421367.6_1_10:101911490-101911556:-|nuORF	57.81127852772723	0.2318599694398087	1				NaN	NaN	0	NaN	4669	3979	8649
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8651	27.89	NaN	2217.9	30	0	203.77	0.106	+			17631	IEKAYAQQL	9	61	532.2930007893938	1062.5714486455875	2	532.2928466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IEKAYAQQL_	ENSG00000100266|ENST00000263246|PACSIN2;ENSG00000165912|ENST00000298838|PACSIN3;nc|ENSG00000100266|Q9UNF0-2|PACSIN2;PACSIN2|p.R50H|1|0.36|ENSG00000100266|chr22:42893525-42893525|C/T|missense_variant;PACSIN3|p.A47T|2|0.36|ENSG00000165912|chr11:47182475-47182475|C/T|missense_variant	83.6470233535746	0.08277643980271215	1				NaN	NaN	0	NaN	4670	3979	8649
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8652	27.892	NaN	1850.5	30	0	151.04	0.106				-1	CMEKGSIMLDR	11	53	678.3078002929688	NaN	0	678.3078002929688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_C(Carbamidomethyl (C))MEKGSIM(Oxidation (M))LDR_	ENSG00000080493|ENST00000264485|SLC4A4;nc|ENSG00000080493|Q9Y6R1-2|SLC4A4;nc|ENSG00000080493|Q9Y6R1-3|SLC4A4;nc|ENSG00000080493|Q9Y6R1-4|SLC4A4;nc|ENSG00000080493|Q9Y6R1-5|SLC4A4;SLC4A4|p.F457Lfs*9|1|0.4|ENSG00000080493|chr4:71453538-71453538|T/-|frameshift_variant;SLC4A4|p.N1031Sfs*30|1|0.06|ENSG00000080493|chr4:71560246-71560247|-/GCTAC|frameshift_variant	29.550750289552195	0.43372083775723597	1				NaN	NaN	0	NaN	4671	3979	8649
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8653	27.893	NaN	2016.4	30	0	258.04	0.106	+			24918	LKQEEYQIQ	9	61	589.8058712808024	1177.5971896284047	2	589.8060913085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LKQEEYQIQ_	ENSG00000133665|ENST00000256039|DYDC2	96.0336014099291	0.047854655524928534	1				NaN	NaN	0	NaN	4672	3979	8649
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8654	27.895	NaN	1804.4	30	0	406.55	0.036	+			33754	RPRPPFPVE	9	51	547.8086424694594	1093.6027320057187	2	547.8093872070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RPRPPFPVE_	ENST00000489062.2_1_9:18908354-18908543:+|nuORF	30.317721548370564	0.5199124245378496	1				NaN	NaN	0	NaN	4673	3979	8649
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8660	27.911	NaN	2861.9	30	0	632.09	0.214	+			4166	ATFGTQVVEK	10	63	540.29015294597	1078.56575295874	2	540.2906494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATFGTQVVEK_	C3|p.A1045Pfs*26|1|0.09|ENSG00000125730|chr19:6694452-6694452|C/-|frameshift_variant;C3|p.S1008Rfs*8|3|0.41|ENSG00000125730|chr19:6694564-6694564|G/-|frameshift_variant;ENSG00000125730|ENST00000245907|C3	53.59686742100583	0.4240759338601513	1				NaN	NaN	0	NaN	4676	3982	8659
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8661	27.915	NaN	1539.1	30	0	232.29	0.106	+			41338	SVLTAKGMA	9	36	439.2443316667423	876.4741104002846	2	439.244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVLTAKGMA_	APOB|p.K4541Sfs*8|1|0.34|ENSG00000084674|chr2:21001800-21001800|T/-|frameshift_variant;APOB|p.S3866Yfs*21|1|0.06|ENSG00000084674|chr2:21005271-21005272|-/TAAGAAAT|frameshift_variant;ENSG00000084674|ENST00000233242|APOB	40.77816245573522	0.41113185337114944	1				NaN	NaN	0	NaN	4677	3982	8659
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8662	27.917	NaN	1576.6	30	0	138.96	0.106			+	38432	SSAKSTWQTL	10	55	554.7848569781381	1107.5551610230762	2	554.7842407226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSAKSTWQTL_	REV__ENST00000569795.5_1_15:72558271-72559838:-|nuORF	38.753607047826485	0.5606299674732264	1				NaN	NaN	0	NaN	4678	3982	8659
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8663	27.919	NaN	1674.8	30	0	159.25	0.034			+	-1	MISLTVFI	8	47	470.26607828059343	NaN	0	470.2658386230469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_M(Oxidation (M))ISLTVFI_	REV__ENSG00000169684|ENST00000299565|CHRNA5	30.503639358989545	1.7418937515398478	1				NaN	NaN	0	NaN	4679	3982	8659
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8671	27.938	NaN	2332.1	30	0	395.91	0.214			+	20432	KETYGLYLQ	9	55	557.7921984645975	1113.569843995995	2	557.7933349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KETYGLYLQ_	REV__ENST00000275235.8_1_6:143605359-143656197:+|nuORF;REV__ENST00000357847.8_1_6:143654424-143660800:+|nuORF	47.95952297671804	0.32689736945648856	1				NaN	NaN	0	NaN	4684	3985	8670
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8672	27.942	NaN	732.41	30	0	104.76	0.034	+			33974	RSERISSL	8	37	474.26583735097864	NaN	0	474.2649230957031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RSERISSL_	tr|U7SP94|U7SP94_FUSNUAdenylosuccinatelyaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01775PE=3SV=1	44.116797842482775	1.7418937515398478	1				NaN	NaN	0	NaN	4685	3985	8670
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8679	27.96	NaN	3134.6	30	0	283.7	0.214	+			11016	FEKIHQETF	9	72	589.7957245711199	1177.5768962090397	2	589.7965698242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FEKIHQETF_	ENSG00000189091|ENST00000302516|SF3B3;nc|ENSG00000189091|Q15393-2|SF3B3	66.9202029811203	0.15592758990009112	1				NaN	NaN	0	NaN	4689	3988	8678
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8680	27.964	NaN	3378.6	30	0	422.07	0.106			+	-1	SMALQVQLA	9	65	488.7596706352428	975.5047883372856	2	488.7604064941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_SM(Oxidation (M))ALQVQLA_	REV__ENSG00000124191|ENST00000341197|TOX2;REV__KIF3B-TOX2|1|fusion;REV__KIF3B-TOX2|2|fusion;REV__nc|ENSG00000124191|Q96NM4-2|TOX2;REV__nc|ENSG00000124191|Q96NM4-3|TOX2;REV__nc|ENSG00000124191|Q96NM4|TOX2	44.116797842482775	0.37197099687881774	1				NaN	NaN	0	NaN	4690	3988	8678
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8681	27.966	NaN	3830.7	30	0	646.56	0.106			+	-1	MLGGGAFDALL	11	65	540.7753935261884	NaN	0	540.7750854492188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))LGGGAFDALL_	REV__ENSG00000242110|ENST00000335606|AMACR;REV__nc|ENSG00000242110|Q9UHK6-5|AMACR	40.77816245573522	0.38155341215020716	1				NaN	NaN	0	NaN	4691	3988	8678
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8682	27.968	NaN	3188.3	30	0	270.6	0.106	+			2206	ALQEIYNQK	9	64	553.7953223974739	1105.5760918617477	2	553.7965087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ALQEIYNQK_	ENSG00000160216|ENST00000291572|AGPAT3;ENST00000484865.1_1_21:45391291-45401085:+|nuORF;nc|ENSG00000160216|Q9NRZ7-2|AGPAT3;nc|ENSG00000160216|Q9NRZ7-3|AGPAT3	107.00750918261382	0.032051501805654005	1				NaN	NaN	0	NaN	4692	3988	8678
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8683	27.969	NaN	3718.5	30	0	1048.5	0.106				-1	RVFVVGVGMTK	11	75	604.8443155601484	1207.6740781870967	2	604.843505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_RVFVVGVGM(Oxidation (M))TK_	ENSG00000116171|ENST00000371514|SCP2;ENST00000528311.5_1_1:53392996-53413692:+|nuORF;nc|ENSG00000116171|P22307-3|SCP2;nc|ENSG00000116171|P22307-7|SCP2;nc|ENSG00000116171|P22307-8|SCP2	28.5767321226876	0.690044582712672	1				NaN	NaN	0	NaN	4693	3988	8678
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8684	27.971	NaN	2070.1	30	0	202.53	0.106	+			984	AEKEVMEEQM	10	60	612.2683771874068	NaN	0	612.2694091796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEKEVMEEQM_	ENSG00000189241|ENST00000368608|TSPYL1	34.08650109265054	0.3882526356989144	1				NaN	NaN	0	NaN	4694	3988	8678
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8685	27.973	NaN	3018.5	30	0	303.25	0.035	+			13207	GIEQISKVY	9	61	518.7877281227592	1035.5609033123183	2	518.7865600585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GIEQISKVY_	ENSG00000181222|ENST00000674977|POLR2A;nc|ENSG00000181222|P24928|POLR2A	37.81151784470057	0.4459294069877048	1				NaN	NaN	0	NaN	4695	3988	8678
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8694	27.993	NaN	8126.2	30	0	1617.2	0.214	+			46042	VCCPGSRHSL	10	69	529.7474643685244	1057.4803758038488	2	529.7477416992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VCCPGSRHSL_	ENST00000591732.1_1_17:76996320-77004185:-|nuORF	79.71258880314673	0.19796908725841375	1				NaN	NaN	0	NaN	4701	3991	8693
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8695	27.997	NaN	3943.3	30	0	512.63	0.106				-1	CGECHHTCGA	10	70	537.6800778872033	1073.3456028412065	2	537.6810302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_C(Carbamidomethyl (C))GECHHTCGA_	PCSK6|p.T854A|1|0.62|ENSG00000140479|chr15:101318328-101318328|T/C|missense_variant	27.882242232435846	0.6521336255503853	1				NaN	NaN	0	NaN	4702	3991	8693
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8696	27.999	NaN	2289.4	30	0	275.25	0.106	+			45489	TYDNVHQQF	9	50	576.2587262761857	1150.5028996191713	2	576.2586669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TYDNVHQQF_	ENSG00000138639|ENST00000395184|ARHGAP24;nc|ENSG00000138639|Q8N264-2|ARHGAP24;nc|ENSG00000138639|Q8N264-3|ARHGAP24	52.936696900407355	0.27249468807391813	1				NaN	NaN	0	NaN	4703	3991	8693
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8697	28	NaN	2538.2	30	0	320.3	0.106	+			41541	SVQDSSVLVQR	11	63	609.3270386895765	1216.639524445953	2	609.3270874023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVQDSSVLVQR_	ENSG00000083097|ENST00000349129|DOP1A	82.5048064154565	0.13149110632092975	1				NaN	NaN	0	NaN	4704	3991	8693
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8698	28.002	NaN	2597.7	30	0	493.5	0.106				-1	SDLIDQCCDL	10	61	591.2434635019525	1180.472374070705	2	591.245361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_SDLIDQC(Carbamidomethyl (C))CDL_	ENSG00000171943|ENST00000367123|SRGAP2C;ENSG00000196369|ENST00000641863|SRGAP2B;ENSG00000266028|ENST00000573034|SRGAP2;ENST00000483628.1_1:206566231-206579954:+|nuORF;SRGAP2|p.H824Sfs*29|1|0.13|ENSG00000266028|chr1:206454983-206454984|-/G|frameshift_variant;SRGAP2|p.P339Lfs*2|1|0.24|ENSG00000266028|chr1:206401603-206401603|C/-|frameshift_variant;SRGAP2|p.Q1062Tfs*4|1|0.06|ENSG00000266028|chr1:206461385-206461386|-/C|frameshift_variant	25.57405402267927	0.6709832231498071	1				NaN	NaN	0	NaN	4705	3991	8693
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8699	28.004	NaN	1800.5	30	0	252.45	0.035			+	49538	VYAPLAGGHF	10	58	516.2702328383323	NaN	0	516.2708129882812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VYAPLAGGHF_	REV__ENSG00000197121|ENST00000354764|PGAP1;REV__ENST00000470179.5_1_2:197712669-197791463:-|nuORF;REV__nc|ENSG00000197121|Q75T13-2|PGAP1;REV__nc|ENSG00000197121|Q75T13-4|PGAP1;REV__PGAP1|p.K723Yfs*11|1|0.11|ENSG00000197121|chr2:196846002-196846003|-/CTATGTGTTTAAGGTAT|frameshift_variant	35.200714571348534	0.3845941098745963	1				NaN	NaN	0	NaN	4706	3991	8693
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8706	28.022	NaN	1495.4	30	0	272.42	0.143	+			3613	ASVSTVLTSK	10	59	496.784026721324	991.553500509448	2	496.7838439941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASVSTVLTSK_	ENSG00000188536|ENST00000251595|HBA2;ENSG00000206172|ENST00000320868|HBA1	66.96192283764107	0.30252237217063654	1				NaN	NaN	0	NaN	4710	3994	8705
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8714	28.044	NaN	2224.2	30	0	226.5	0.214	+			36051	SEISSATKL	9	49	468.255608999787	934.496665066374	2	468.2554931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEISSATKL_	ATRX|p.I1049*|1|0.07|ENSG00000085224|chrX:77682111-77682111|T/-|frameshift_variant;ATRX|p.I1049Nfs*4|1|0.15|ENSG00000085224|chrX:77682110-77682111|-/T|frameshift_variant;ATRX|p.K993Rfs*10|1|0.26|ENSG00000085224|chrX:77682278-77682278|T/-|frameshift_variant;ATRX|p.N1318Ifs*28|1|0.39|ENSG00000085224|chrX:77663549-77663549|T/-|frameshift_variant;ATRX|p.Q1385Sfs*6|1|0.26|ENSG00000085224|chrX:77656621-77656622|-/A|frameshift_variant;ATRX|p.R840Kfs*9|1|0.36|ENSG00000085224|chrX:77682737-77682738|-/T|frameshift_variant;ENSG00000085224|ENST00000373344|ATRX;nc|ENSG00000085224|P46100-2|ATRX;nc|ENSG00000085224|P46100-3|ATRX;nc|ENSG00000085224|P46100-4|ATRX;nc|ENSG00000085224|P46100-5|ATRX;nc|ENSG00000085224|P46100-6|ATRX	95.81516180277367	0.04847050768394289	1				NaN	NaN	0	NaN	4715	3997	8713
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8715	28.047	NaN	1415	30	0	273.23	0.106				-1	 	0	45	343.1988976962893	684.3832424593786	2	343.1988830566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	4716	3997	8713
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8716	28.049	NaN	1423.8	30	0	233.64	0.035	+			9875	EQHKVLAAL	9	49	504.79428970921776	1007.5740264852355	2	504.7960510253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EQHKVLAAL_	DZIP1L|p.R643Gfs*40|2|0.24|ENSG00000158163|chr3:138067606-138067606|G/-|frameshift_variant;ENSG00000158163|ENST00000327532|DZIP1L;nc|ENSG00000158163|Q8IYY4-2|DZIP1L	19.359975847455235	0.6112419832031293	1				NaN	NaN	0	NaN	4717	3997	8713
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8725	28.069	NaN	6649	30	0	2055.4	0.214	+			45518	TYHPPGQTF	9	62	524.2483807325508	1046.4822085319015	2	524.24853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TYHPPGQTF_	FCGBP-ACSS2|1|fusion;nc|ENSG00000275395|Q9Y6R7|FCGBP	93.19546047674547	0.05585629608842056	1				NaN	NaN	0	NaN	4723	4000	8724
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8726	28.073	NaN	1538.2	30	0	209.48	0.106			+	24727	LHPPSSSFRV	10	54	563.8043823242188	NaN	0	563.8043823242188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LHPPSSSFRV_	REV__ENST00000402367.5_1_19:54711128-54711440:+|nuORF	21.9598887501803	0.4201028297492154	1				NaN	NaN	0	NaN	4724	4000	8724
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8727	28.075	NaN	1431.4	30	0	195.3	0.035			+	32249	QTKTVYIR	8	54	504.79428970921776	1007.5740264852355	2	504.7970886230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QTKTVYIR_	REV__ENSG00000182050|ENST00000611864|MGAT4C;REV__nc|ENSG00000182050|Q9UBM8-2|MGAT4C	47.657333605630114	0.6087971902037268	1				NaN	NaN	0	NaN	4725	4000	8724
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8735	28.094	NaN	6797.8	30	0	536.66	0.212	+			20184	KEKYIDQEEL	10	83	647.8297434364163	1293.6449339396324	2	647.82958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEKYIDQEEL_	ENSG00000080824|ENST00000216281|HSP90AA1;ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000507090.2_1_4:13338641-13339112:+|nuORF;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;HSP90AA1|p.K419Nfs*3|1|0.25|ENSG00000080824|chr14:102083874-102083874|T/-|frameshift_variant;HSP90AA1|p.S330Qfs*48|1|0.21|ENSG00000080824|chr14:102084558-102084558|A/-|frameshift_variant;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000205940|Q58FF8|HSP90AB2P;nc|ENSG00000224411|Q14568|HSP90AA2P	107.45493779368988	0.05555770664244329	1				NaN	NaN	0	NaN	4730	4003	8734
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8736	28.098	NaN	2273.9	30	0	424.84	0.034	+			27261	METVNEPE	8	51	474.70361244533575	947.3926719574715	2	474.70379638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_METVNEPE_	nc|ENSG00000204334|A1L162|ERICH2	35.61828744233558	0.6843154725607303	1				NaN	NaN	0	NaN	4731	4003	8734
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8748	28.124	NaN	7211	30	0	729.18	0.214	+			23265	KYKDAANLL	9	72	518.2940634272722	1034.5735739213444	2	518.295654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KYKDAANLL_	ENSG00000126214|ENST00000334553|KLC1;KLC1|p.N469Tfs*18|1|0.15|ENSG00000126214|chr14:103677436-103677436|A/-|frameshift_variant;nc|ENSG00000126214|Q07866-10|KLC1;nc|ENSG00000126214|Q07866-2|KLC1;nc|ENSG00000126214|Q07866-3|KLC1;nc|ENSG00000126214|Q07866-4|KLC1;nc|ENSG00000126214|Q07866-5|KLC1;nc|ENSG00000126214|Q07866-6|KLC1;nc|ENSG00000126214|Q07866-7|KLC1;nc|ENSG00000126214|Q07866-8|KLC1;nc|ENSG00000126214|Q07866|KLC1	80.45461616416974	0.09558281504443908	1				NaN	NaN	0	NaN	4740	4006	8747
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8749	28.127	NaN	1461.8	30	0	352.27	0.106				-1	 	0	44	344.2249834286662	686.4354139241324	2	344.2251281738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	4741	4006	8747
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8750	28.129	NaN	2229.7	30	0	334.83	0.106			+	27300	MGSAMAVLVPS	11	54	531.7694904322485	1061.524427931297	2	531.769775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MGSAMAVLVPS_	REV__ENST00000248104.11_1_16:1413635-1413878:-|nuORF	47.657333605630114	0.4531673460382624	1				NaN	NaN	0	NaN	4742	4006	8747
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8751	28.131	NaN	740.52	30	0	135.12	0.106				-1	 	0	27	329.2196859498538	656.4248189665076	2	329.2196044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	4743	4006	8747
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8752	28.133	NaN	1242.4	30	0	146.73	0.106	+			25790	LSASARTM	8	39	426.7141091590054	851.4136653848108	2	426.7136535644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_LSASARTM(Oxidation (M))_	ENST00000440859.7_1_7:107384347-107384455:+|nuORF	54.776311868738084	0.5534952410049249	1				NaN	NaN	0	NaN	4744	4006	8747
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8753	28.135	NaN	1012	30	0	112.91	0.038	+			41832	SVSTITRIYR	10	48	598.3436279296875	NaN	0	598.3436279296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVSTITRIYR_	ENSG00000197386|ENST00000355072|HTT;ENST00000510626.5_1_4:3131970-3189635:+|nuORF;HTT|p.H2238Ffs*6|1|0.28|ENSG00000197386|chr4:3212643-3212644|CA/-|frameshift_variant;HTT|p.P1176Lfs*3|1|0.18|ENSG00000197386|chr4:3154316-3154316|C/-|frameshift_variant;HTT|p.P2413Hfs*44|1|0.6|ENSG00000197386|chr4:3217944-3217944|C/-|frameshift_variant	29.170058357718403	0.40439580130713204	1				NaN	NaN	0	NaN	4745	4006	8747
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8764	28.158	NaN	5666.9	30	0	2090.6	0.214			+	50985	YINLKYATL	9	49	366.87814353799774	1097.6126012141933	3	366.8778991699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YINLKYATL_	REV__ENST00000523153.2_1_8:54885384-54885555:+|nuORF	44.116797842482775	0.37197099687881774	1				NaN	NaN	0	NaN	4753	4009	8763
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8765	28.162	NaN	3177.7	30	0	311.12	0.106	+			12547	GEGETKFNKL	10	70	561.7927668241384	1121.5709807150768	2	561.79443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEGETKFNKL_	TRMT61B|p.K169N|1|0.36|ENSG00000171103|chr2:28869771-28869771|C/A|missense_variant	25.57405402267927	0.6709832231498071	1				NaN	NaN	0	NaN	4754	4009	8763
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8766	28.164	NaN	2945.8	30	0	673.28	0.106			+	33607	RLRAHNQL	8	44	336.5341935770937	NaN	0	336.53436279296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RLRAHNQL_	REV__ENSG00000149256|ENST00000278550|TENM4;REV__TENM4|p.D591Tfs*18|1|0.46|ENSG00000149256|chr11:78814307-78814307|G/-|frameshift_variant;REV__TENM4|p.R2689Gfs*41|1|0.3|ENSG00000149256|chr11:78658303-78658303|G/-|frameshift_variant;REV__TENM4|p.S524Lfs*4|1|0.46|ENSG00000149256|chr11:78854215-78854216|-/G|frameshift_variant	26.79610172149135	1.7418937515398478	1				NaN	NaN	0	NaN	4755	4009	8763
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8767	28.166	NaN	1369.7	30	0	161.19	0.106	+			15593	GVIIVGNPK	9	39	448.7815438543923	895.5485347755846	2	448.7815246582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GVIIVGNPK_	ENSG00000005007|ENST00000262803|UPF1;ENST00000600689.1_1_19:18974163-18976510:+|nuORF;nc|ENSG00000005007|Q92900|UPF1	55.50420428727701	0.2510918378945873	1				NaN	NaN	0	NaN	4756	4009	8763
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8768	28.168	NaN	2233.5	30	0	349.32	0.106	+			37466	SLKFYKEL	8	45	514.2929608040924	1026.5713686749848	2	514.2933349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SLKFYKEL_	ENSG00000163466|ENST00000315717|ARPC2;ENST00000465395.5_1_2:219082193-219103574:+|nuORF;ENST00000471355.5_1_2:219093513-219093687:+|nuORF;ENST00000489598.5_1_2:219082193-219099125:+|nuORF;ENST00000491780.5_1_2:219082193-219100082:+|nuORF	34.172542307311794	0.6954784234644539	1				NaN	NaN	0	NaN	4757	4009	8763
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8769	28.169	NaN	2537.8	30	0	407.42	0.106	+			13010	GEVEKYQQL	9	69	547.2794390524323	1092.5443251716645	2	547.2798461914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GEVEKYQQL_	ENSG00000204220|ENST00000374606|PFDN6;ENST00000395134.3_1_6:33257633-33258228:+|nuORF;ENST00000491382.1_1_6:33257633-33258228:+|nuORF	65.46538089061403	0.16805504838372562	1				NaN	NaN	0	NaN	4758	4009	8763
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8770	28.171	NaN	2043.4	30	0	239.04	0.037	+			21870	KRLYRAPID	9	64	566.3339444661677	1130.6533359991354	2	566.3358764648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KRLYRAPID_	ENSG00000119523|ENST00000476832|ALG2;nc|ENSG00000119523|Q9H553-2|ALG2	56.72105179125745	0.24094814563026265	1				NaN	NaN	0	NaN	4759	4009	8763
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8779	28.193	NaN	3027.1	30	0	390.07	0.214	+			38798	SSMTAVLQK	9	54	482.7596709345073	963.5047889358146	2	483.2611999511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSMTAVLQK_	ENST00000470658.1_1_21:44293721-44296875:-|nuORF	124.08010499294276	0.018729767491916592	1				NaN	NaN	0	NaN	4765	4012	8778
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8780	28.196	NaN	1960.4	30	0	774.85	0.106			+	38928	SSQLSPAALL	10	50	493.77922840545125	985.5439038777025	2	493.77874755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSQLSPAALL_	REV__ENST00000526156.1_1_11:4107651-4113025:+|nuORF	40.77816245573522	0.5419747034533848	1				NaN	NaN	0	NaN	4766	4012	8778
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8781	28.198	NaN	1983.1	30	0	1019.5	0.106			+	373	AARLITKPG	9	44	463.79275640166514	925.5709598701303	2	463.7923278808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AARLITKPG_	REV__ENSG00000140688|ENST00000327237|RUSF1;REV__ENST00000568491.1_1_16:31502158-31504599:-|nuORF;REV__nc|ENSG00000140688|Q96GQ5-2|RUSF1	18.324413293986947	0.6112419832031293	1				NaN	NaN	0	NaN	4767	4012	8778
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8782	28.2	NaN	1628.2	30	0	313.02	0.106			+	14103	GSLGSLLGR	9	46	430.25296466591766	858.4913763986353	2	430.2525939941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GSLGSLLGR_	REV__AHDC1|p.F1046Sfs*96|1|0.2|ENSG00000126705|chr1:27548981-27548981|G/-|frameshift_variant;REV__AHDC1|p.K985Sfs*157|1|0.06|ENSG00000126705|chr1:27549162-27549162|T/-|frameshift_variant;REV__ENST00000247087.9_1_1:27875205-27875379:-|nuORF	56.72105179125745	0.24094814563026265	1				NaN	NaN	0	NaN	4768	4012	8778
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8783	28.202	NaN	2159.3	30	0	189.34	0.036	+			18385	IREPRTTAL	9	59	528.8127561113208	NaN	0	528.8139038085938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IREPRTTAL_	ENSG00000112592|ENST00000392092|TBP;ENSG00000182521|ENST00000247219|TBPL2;nc|ENSG00000112592|P20226-2|TBP;TBPL2|p.K373*|1|0.38|ENSG00000182521|chr14:55414390-55414391|-/A|frameshift_variant	37.15910966729921	0.2899585034171616	1				NaN	NaN	0	NaN	4769	4012	8778
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8792	28.223	NaN	6715.5	30	0	936.02	0.214	+			36056	SEITTKDL	8	75	453.74246332781587	905.4703737224318	2	453.7422790527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEITTKDL_	ENSG00000187514|ENST00000409115|PTMA;ENST00000468027.5_1_2:232573416-232577283:+|nuORF;nc|ENSG00000187514|P06454|PTMA	107.00750918261382	0.24681273948614665	1				NaN	NaN	0	NaN	4775	4015	8791
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8793	28.227	NaN	2060.3	30	0	215.76	0.106	+			26537	LTRDSTLPQ	9	63	515.7799207936824	1029.5452886541648	2	515.7796020507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LTRDSTLPQ_	ENST00000505295.1_1_5:80540896-80542784:-|nuORF	58.78195531508484	0.22376836668196862	1				NaN	NaN	0	NaN	4776	4015	8791
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8794	28.229	NaN	1397.3	30	0	199.27	0.106	+			24152	LELPQLTQ	8	42	471.2684780557946	940.5224031783893	2	471.2681884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LELPQLTQ_	ENST00000529652.1_1_17:80551717-80553973:+|nuORF	29.14955571784316	0.7342621283720113	1				NaN	NaN	0	NaN	4777	4015	8791
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8795	28.231	NaN	1050.8	30	0	149.44	0.106			+	10203	ETFGKTQLT	9	51	512.7697479510348	NaN	0	512.7694702148438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ETFGKTQLT_	REV__ENSG00000196581|ENST00000378191|AJAP1	39.252832667884924	0.27938773122138094	1				NaN	NaN	0	NaN	4778	4015	8791
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8796	28.233	NaN	4133.5	30	0	523.93	0.034				-1	 	0	62	486.2848881373056	970.5552233414112	2	486.28472900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	4779	4015	8791
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8805	28.253	NaN	1104.8	30	0	210.16	0.214	+			50651	YEDNNYKAL	9	45	565.2622680664062	NaN	0	565.2622680664062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YEDNNYKAL_	ABCA1|p.G751Afs*77|1|0.1|ENSG00000165029|chr9:104827033-104827033|C/-|frameshift_variant;ABCA1|p.L2013*|1|0.14|ENSG00000165029|chr9:104788457-104788457|A/-|frameshift_variant;ABCA1|p.L467Wfs*41|1|0.26|ENSG00000165029|chr9:104832683-104832683|A/-|frameshift_variant;ENSG00000165029|ENST00000374736|ABCA1	36.446750945000026	0.29355505452396785	1				NaN	NaN	0	NaN	4785	4018	8804
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8806	28.256	NaN	800.96	30	0	183.49	0.106	+			33672	RNLQLVRS	8	39	329.201483361816	NaN	0	329.20147705078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RNLQLVRS_	ENSG00000102910|ENST00000285737|LONP2;LONP2|p.D678Efs*7|1|0.07|ENSG00000102910|chr16:48347601-48347602|-/GT|frameshift_variant;nc|ENSG00000102910|Q86WA8-2|LONP2	19.1035232394073	1.7418937515398478	1				NaN	NaN	0	NaN	4786	4018	8804
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8807	28.258	NaN	1163.7	30	0	129.72	0.106	+			25290	LNTVDTKSPE	10	47	552.2823595525391	1102.5501661718781	2	552.2830200195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LNTVDTKSPE_	ENST00000549914.1_1_12:93399872-93400010:+|nuORF;ENST00000552353.2_1_12:93399872-93413194:+|nuORF	35.15202426646627	0.5927656479315102	1				NaN	NaN	0	NaN	4787	4018	8804
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8808	28.26	NaN	1574.9	30	0	142.87	0.04				-1	ECLFLCSIPFP	11	59	691.8286201823869	1381.6426874315737	2	691.8282470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_EC(Carbamidomethyl (C))LFLC(Carbamidomethyl (C))SIPFP_	ENST00000537619.6_1_12:71058179-71058296:-|nuORF	20.94693142431847	0.7700749696703488	1				NaN	NaN	0	NaN	4788	4018	8804
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8815	28.278	NaN	5344.5	30	0	800.27	0.214	+			8419	EAQPIVTKY	9	77	524.7872649104004	1047.5599768876007	2	524.787841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EAQPIVTKY_	ENSG00000214753|ENST00000301785|HNRNPUL2	104.0567914643314	0.03506238181059741	1				NaN	NaN	0	NaN	4792	4021	8814
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8816	28.282	NaN	2437.1	30	0	471.08	0.106				-1	LSIPMFLCL	9	58	526.7798001803155	1051.545047427431	2	526.7800903320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LSIPM(Oxidation (M))FLCL_	KCNN1|p.R237C|1|0.23|ENSG00000105642|chr19:17981919-17981919|C/T|missense_variant	33.51558372728122	0.4900267029546261	1				NaN	NaN	0	NaN	4793	4021	8814
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8817	28.284	NaN	2293.7	30	0	1248.4	0.106				-1	MDLAAEQLRL	10	34	392.541277400121	1174.602002800563	3	392.54132080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))DLAAEQLRL_	ENSG00000133812|ENST00000256190|SBF2;ENST00000533770.5_1_11:9861043-10215451:-|nuORF;nc|ENSG00000133812|Q86WG5-3|SBF2;SBF2|p.E1445Sfs*15|1|0.09|ENSG00000133812|chr11:9808111-9808111|T/-|frameshift_variant;SBF2|p.Y797*|1|0.08|ENSG00000133812|chr11:9853685-9853686|AT/-|frameshift_variant	29.170058357718403	0.6416167986984785	1				NaN	NaN	0	NaN	4794	4021	8814
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8818	28.285	NaN	1309	30	0	181.64	0.106			+	25191	LMEKQREIE	9	50	588.3079212213598	1174.6012895095196	2	588.8087158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LMEKQREIE_	REV__ENSG00000131323|ENST00000392745|TRAF3;REV__nc|ENSG00000131323|Q13114-2|TRAF3;REV__TRAF3|p.F475Lfs*20|1|0.28|ENSG00000131323|chr14:102905497-102905497|T/-|frameshift_variant	42.86426827375447	0.38666266728046506	1				NaN	NaN	0	NaN	4795	4021	8814
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8819	28.287	NaN	1110.6	30	0	194.35	0.036			+	-1	SAASVCPALAL	11	39	530.279541015625	NaN	0	530.279541015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_SAASVC(Carbamidomethyl (C))PALAL_	REV__ENST00000299155.9_1_14:103395157-103395536:+|nuORF;REV__ENST00000558590.1_1_14:103395136-103395313:+|nuORF	27.882242232435846	0.44115667141176046	1				NaN	NaN	0	NaN	4796	4021	8814
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8829	28.31	NaN	2635.7	30	0	243.85	0.214	+			41566	SVQEYFVRK	9	60	578.3109712242652	1154.6073895153304	2	578.3114013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVQEYFVRK_	ENSG00000163781|ENST00000260810|TOPBP1;TOPBP1|p.K1266Nfs*10|1|0.13|ENSG00000163781|chr3:133616887-133616887|T/-|frameshift_variant;TOPBP1|p.R1378Sfs*18|1|0.04|ENSG00000163781|chr3:133611043-133611044|-/AAAAGAGAATGTG|frameshift_variant;TOPBP1|p.R964Efs*12|1|0.19|ENSG00000163781|chr3:133624090-133624090|T/-|frameshift_variant	85.86182877749512	0.07653218437724067	1				NaN	NaN	0	NaN	4803	4024	8828
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8830	28.314	NaN	2936.5	30	0	473.08	0.106	+			36380	SETHIYQV	8	56	488.74023916124344	975.4659253892869	2	488.7401428222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SETHIYQV_	ENSG00000165934|ENST00000298875|CPSF2	44.116797842482775	0.6307669463330267	1				NaN	NaN	0	NaN	4804	4024	8828
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8831	28.316	NaN	2192.5	30	0	482.73	0.106	+			11562	FPLNSIPTPL	10	42	366.87814353799774	1097.6126012141933	3	367.21295166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FPLNSIPTPL_	ENSG00000165349|ENST00000374299|SLC7A3	41.42661286455405	0.5359995577334734	1				NaN	NaN	0	NaN	4805	4024	8828
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8832	28.318	NaN	1799.8	30	0	325.52	0.106	+			49487	VVYTSHLQLK	10	64	594.3431443004886	1186.671735667777	2	594.3439331054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVYTSHLQLK_	ENSG00000015568|ENST00000016946|RGPD5;ENSG00000153165|ENST00000409886|RGPD3;ENSG00000153201|ENST00000283195|RANBP2;ENSG00000169629|ENST00000302558|RGPD8;ENSG00000183054|ENST00000329516|RGPD6;ENSG00000185304|ENST00000398146|RGPD2;ENSG00000187627|ENST00000641458|RGPD1;ENSG00000196862|ENST00000408999|RGPD4;ENST00000522286.5_1_2:113158797-113161561:-|nuORF;nc|ENSG00000183054|Q99666-2|RGPD5;nc|ENSG00000187627|P0DJD0|RGPD1;RANBP2|p.A864Lfs*3|1|0.3|ENSG00000153201|chr2:108758533-108758533|G/-|frameshift_variant;RANBP2|p.C2737Vfs*35|1|0.18|ENSG00000153201|chr2:108772957-108772957|T/-|frameshift_variant;RANBP2|p.F3068Lfs*10|1|0.06|ENSG00000153201|chr2:108782692-108782692|T/-|frameshift_variant;RANBP2|p.H3114Sfs*18|1|0.33|ENSG00000153201|chr2:108782827-108782828|-/T|frameshift_variant;RANBP2|p.K1989Nfs*9|1|0.05|ENSG00000153201|chr2:108766505-108766506|-/TATCCTG|frameshift_variant;RANBP2|p.K2576Nfs*63|2|0.22|ENSG00000153201|chr2:108768262-108768262|A/-|frameshift_variant;RANBP2|p.S1486Rfs*51|1|0.05|ENSG00000153201|chr2:108764996-108764997|-/ATTTTGTATTC|frameshift_variant;RGPD2|p.F1350Lfs*25|1|0.25|ENSG00000185304|chr2:87782974-87782974|A/-|frameshift_variant;RGPD3|p.V1441*|1|0.45|ENSG00000153165|chr2:106423647-106423647|T/-|frameshift_variant;RGPD4|p.K568Nfs*33|1|0.14|ENSG00000196862|chr2:107859787-107859787|A/-|frameshift_variant	84.81729255234993	0.1607459278640679	1				NaN	NaN	0	NaN	4806	4024	8828
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8833	28.32	NaN	2250.9	30	0	1033	0.106	+			44056	TPRMASVKLSV	11	33	396.89802467795363	NaN	0	396.8980407714844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TPRMASVKLSV_	ENST00000426647.2_1_7:32852458-32867019:+|nuORF	21.780426970141523	0.456735970842152	1				NaN	NaN	0	NaN	4807	4024	8828
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8834	28.321	NaN	1393.7	30	0	173.78	0.038			+	11691	FRIFVSWKK	9	55	605.8609008789062	NaN	0	605.8609008789062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FRIFVSWKK_	REV__ENST00000469733.5_1_1:2129472-2132643:-|nuORF	27.047317107675042	0.34101084205454363	1				NaN	NaN	0	NaN	4808	4024	8828
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8844	28.345	NaN	5443.7	30	0	2046.2	0.214	+			49747	VYPDGIRHI	9	65	535.2931410713161	1068.571729209432	2	535.293701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYPDGIRHI_	ENSG00000189091|ENST00000302516|SF3B3;ENST00000568291.2_1_16:70588380-70590279:+|nuORF	101.25262130126117	0.03792372629710479	1				NaN	NaN	0	NaN	4815	4027	8843
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8845	28.348	NaN	3420	30	0	579.7	0.106	+			34076	RSPPPGMGL	9	49	456.2417644345112	910.4689759358224	2	456.2417297363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RSPPPGMGL_	ENSG00000116560|ENST00000357214|SFPQ;nc|ENSG00000116560|P23246-2|SFPQ	56.72105179125745	0.24094814563026265	1				NaN	NaN	0	NaN	4816	4027	8843
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8846	28.35	NaN	2693.1	30	0	200.26	0.106	+			26406	LTEKKEKI	8	65	494.80546106492403	987.5963691966481	2	494.80535888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LTEKKEKI_	BCAS3|p.E56K|1|0.3|ENSG00000141376|chr17:60689713-60689713|G/A|missense_variant	77.31757898189308	0.345924878368729	1				NaN	NaN	0	NaN	4817	4027	8843
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8847	28.352	NaN	1499.1	30	0	300.61	0.106	+			6991	CQVCFQIFPN	10	65	599.774577635374	NaN	0	599.7760009765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_CQVCFQIFPN_	ENSG00000126804|ENST00000683701|ZBTB1	32.81241826257853	0.3924360933802784	1				NaN	NaN	0	NaN	4818	4027	8843
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8848	28.354	NaN	1658.7	30	0	257.87	0.106	+			50652	YEDQTKPVL	9	59	546.7821121092852	1091.5496712853703	2	546.7836303710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YEDQTKPVL_	ENSG00000147853|ENST00000381809|AK3;nc|ENSG00000147853|Q9UIJ7-2|AK3;nc|ENSG00000147853|Q9UIJ7-3|AK3	56.43379154798735	0.2433427591689151	1				NaN	NaN	0	NaN	4819	4027	8843
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8849	28.356	NaN	1694.4	30	0	205.14	0.106	+			38660	SSIQGQWPK	9	56	515.7697474005502	1029.5249418679002	2	515.770263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSIQGQWPK_	ARID4B|p.T939Rfs*2|2|0.22|ENSG00000054267|chr1:235182104-235182104|T/-|frameshift_variant;ENSG00000054267|ENST00000264183|ARID4B;ENST00000491632.5_1_1:235341091-235490234:-|nuORF;nc|ENSG00000054267|Q4LE39-2|ARID4B;nc|ENSG00000054267|Q4LE39-3|ARID4B;nc|ENSG00000054267|Q4LE39-4|ARID4B	54.776311868738084	0.25715957988447635	1				NaN	NaN	0	NaN	4820	4027	8843
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8850	28.358	NaN	1259.8	30	0	120.69	0.037			+	38372	SRSFCIGIFN	10	46	572.2860107421875	NaN	0	572.2860107421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SRSFCIGIFN_	REV__ENSG00000214160|ENST00000397676|ALG3;REV__ENST00000485912.1_1_3:183960304-183960812:-|nuORF;REV__nc|ENSG00000214160|Q92685-2|ALG3	18.262085536374414	0.4201028297492154	1				NaN	NaN	0	NaN	4821	4027	8843
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8855	28.372	NaN	2753.3	30	0	789.18	0.214			+	46974	VKKWCLIV	8	44	330.20587564345635	987.5957975305691	3	330.2059326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VKKWCLIV_	REV__nc|ENSG00000186314|Q8N945|PRELID2	40.5726180659479	0.6527593143185008	1				NaN	NaN	0	NaN	4823	4030	8854
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8856	28.376	NaN	3202.3	30	0	507.05	0.106	+			40937	SVFSICHSK	9	59	504.2528200671712	1006.4910872011425	2	504.25225830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVFSICHSK_	ENSG00000198788|ENST00000675028|MUC2;nc|ENSG00000198788|Q02817|MUC2	65.46538089061403	0.16805504838372562	1				NaN	NaN	0	NaN	4824	4030	8854
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8857	28.378	NaN	2541.7	30	0	190.94	0.106	+			8265	EAGPRDGKAL	10	61	507.27213149679386	1012.5297100603877	2	507.2721862792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EAGPRDGKAL_	ENST00000411704.1_1_3:196668391-196669296:-|nuORF;ENST00000452404.6_1_3:196669203-196669296:-|nuORF	36.446750945000026	0.5818864909973037	1				NaN	NaN	0	NaN	4825	4030	8854
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8858	28.38	NaN	1100.3	30	0	141.77	0.106			+	25279	LNRPGGPP	8	43	404.22740732679364	806.4402617203873	2	404.2275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LNRPGGPP_	REV__ENSG00000112320|ENST00000317357|SOBP;REV__SOBP|p.P463Rfs*31|1|0.33|ENSG00000112320|chr6:107634227-107634227|C/-|frameshift_variant	37.028477286268924	0.6747514403204248	1				NaN	NaN	0	NaN	4826	4030	8854
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8859	28.381	NaN	1736.5	30	0	140.59	0.106	+			18997	IVVEHIIMK	9	56	549.3224541146878	1096.6303552961756	2	549.3232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_IVVEHIIM(Oxidation (M))K_	ENSG00000109133|ENST00000504986|TMEM33;TMEM33|p.L211P|1|0.2|ENSG00000109133|chr4:41954087-41954087|T/C|missense_variant	56.72105179125745	0.24094814563026265	1				NaN	NaN	0	NaN	4827	4030	8854
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8860	28.383	NaN	1402.7	30	0	232.81	0.106	+			11656	FQKGGLQIK	9	46	509.8060302734375	NaN	0	509.8060302734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FQKGGLQIK_	ENSG00000135436|ENST00000257894|FAM186B;ENST00000533372.1_1_12:49976813-49999059:-|nuORF;nc|ENSG00000135436|Q8IYM0-2|FAM186B	36.446750945000026	0.29355505452396785	1				NaN	NaN	0	NaN	4828	4030	8854
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8861	28.385	NaN	1322.9	30	0	172.76	0.034			+	7665	DLANAQIPV	9	45	470.7569274902344	NaN	0	470.7569274902344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DLANAQIPV_	REV__ENSG00000127328|ENST00000247833|RAB3IP;REV__nc|ENSG00000127328|Q96QF0-3|RAB3IP;REV__nc|ENSG00000127328|Q96QF0-4|RAB3IP;REV__nc|ENSG00000127328|Q96QF0-5|RAB3IP;REV__nc|ENSG00000127328|Q96QF0-6|RAB3IP;REV__nc|ENSG00000127328|Q96QF0-7|RAB3IP;REV__nc|ENSG00000127328|Q96QF0|RAB3IP;REV__RAB3IP|p.E355Sfs*2|1|0.09|ENSG00000127328|chr12:69800333-69800334|-/CTCT|frameshift_variant;REV__RAB3IP|p.K281Rfs*13|1|0.3|ENSG00000127328|chr12:69795246-69795246|A/-|frameshift_variant	44.116797842482775	0.2472372736944149	1				NaN	NaN	0	NaN	4829	4030	8854
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8873	28.411	NaN	6902.3	30	0	1067.7	0.214			+	7044	CSYQGALSR	9	57	492.7316760507045	983.448799168209	2	492.73175048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CSYQGALSR_	REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-13|TTN;REV__nc|ENSG00000155657|Q8WZ42-2|TTN;REV__nc|ENSG00000155657|Q8WZ42-4|TTN;REV__nc|ENSG00000155657|Q8WZ42-5|TTN;REV__nc|ENSG00000155657|Q8WZ42-7|TTN;REV__nc|ENSG00000155657|Q8WZ42-8|TTN;REV__nc|ENSG00000155657|Q8WZ42|TTN;REV__TTN|p.A12650Gfs*4|1|0.4|ENSG00000155657|chr2:178633489-178633490|-/T|frameshift_variant;REV__TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;REV__TTN|p.D20259Rfs*40|1|0.44|ENSG00000155657|chr2:178583105-178583106|-/T|frameshift_variant;REV__TTN|p.D21555Ifs*6|1|0.33|ENSG00000155657|chr2:178576659-178576659|G/-|frameshift_variant;REV__TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;REV__TTN|p.E15132Sfs*22|1|0.27|ENSG00000155657|chr2:178612094-178612094|C/-|frameshift_variant;REV__TTN|p.E20392Dfs*6|1|0.04|ENSG00000155657|chr2:178582357-178582358|-/TTTAAAATTA|frameshift_variant;REV__TTN|p.E20392Kfs*4|1|0.02|ENSG00000155657|chr2:178582359-178582360|-/TTTT|frameshift_variant;REV__TTN|p.E9224Gfs*8|1|0.04|ENSG00000155657|chr2:178709697-178709698|-/TCTTATGATATCTTGAC|frameshift_variant;REV__TTN|p.F18705Lfs*8|1|0.37|ENSG00000155657|chr2:178590687-178590687|A/-|frameshift_variant;REV__TTN|p.G12742Vfs*2|1|0.05|ENSG00000155657|chr2:178632983-178632983|C/-|frameshift_variant;REV__TTN|p.G14712Dfs*11|1|0.37|ENSG00000155657|chr2:178614341-178614341|G/-|frameshift_variant;REV__TTN|p.G19920Afs*12|1|0.42|ENSG00000155657|chr2:178584961-178584961|G/-|frameshift_variant;REV__TTN|p.G22029Efs*22|2|0.13|ENSG00000155657|chr2:178575125-178575125|T/-|frameshift_variant;REV__TTN|p.I10495Nfs*4|1|0.37|ENSG00000155657|chr2:178685288-178685289|-/T|frameshift_variant;REV__TTN|p.I24998Nfs*2|1|0.35|ENSG00000155657|chr2:178566216-178566217|-/T|frameshift_variant;REV__TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;REV__TTN|p.I9225Cfs*34|1|0.06|ENSG00000155657|chr2:178709695-178709696|-/ATATCCATGAGCA|frameshift_variant;REV__TTN|p.K10923Rfs*104|2|0.23|ENSG00000155657|chr2:178679362-178679362|T/-|frameshift_variant;REV__TTN|p.K11381Nfs*25|1|0.07|ENSG00000155657|chr2:178671133-178671133|T/-|frameshift_variant;REV__TTN|p.K11556Sfs*15|1|0.39|ENSG00000155657|chr2:178652287-178652287|T/-|frameshift_variant;REV__TTN|p.K14271Qfs*5|1|0.02|ENSG00000155657|chr2:178617351-178617352|-/G|frameshift_variant;REV__TTN|p.K26626Nfs*34|1|0.34|ENSG00000155657|chr2:178561331-178561331|T/-|frameshift_variant;REV__TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;REV__TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;REV__TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant;REV__TTN|p.N13487Tfs*49|1|0.34|ENSG00000155657|chr2:178621335-178621335|T/-|frameshift_variant;REV__TTN|p.N15496Ifs*16|1|0.09|ENSG00000155657|chr2:178610116-178610116|T/-|frameshift_variant;REV__TTN|p.P16126Rfs*3|1|0.25|ENSG00000155657|chr2:178607301-178607302|TG/-|frameshift_variant;REV__TTN|p.P22810Hfs*10|1|0.03|ENSG00000155657|chr2:178572780-178572781|-/AAAT|frameshift_variant;REV__TTN|p.V10632Yfs*16|1|0.16|ENSG00000155657|chr2:178683254-178683254|T/-|frameshift_variant;REV__TTN|p.V11008Sfs*13|1|0.33|ENSG00000155657|chr2:178678146-178678147|-/T|frameshift_variant;REV__TTN|p.V11345Ffs*4|1|0.4|ENSG00000155657|chr2:178672044-178672044|T/-|frameshift_variant;REV__TTN|p.V13823*|1|0.28|ENSG00000155657|chr2:178620027-178620027|C/-|frameshift_variant;REV__TTN|p.V22573Cfs*4|2|0.31|ENSG00000155657|chr2:178573492-178573492|C/-|frameshift_variant;REV__TTN|p.V27442Cfs*4|1|0.05|ENSG00000155657|chr2:178558107-178558108|-/A|frameshift_variant	95.81516180277367	0.04847050768394289	1				NaN	NaN	0	NaN	4838	4033	8872
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8874	28.415	NaN	14039	30	0	5858.1	0.106	+			49748	VYPDGIRHI	9	56	357.1977411489995	1068.5713940471985	3	357.19769287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYPDGIRHI_	ENSG00000189091|ENST00000302516|SF3B3;ENST00000568291.2_1_16:70588380-70590279:+|nuORF	34.172542307311794	0.4838870758800184	1				NaN	NaN	0	NaN	4839	4033	8872
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8875	28.417	NaN	2678.4	30	0	739.83	0.106	+			27289	MGLVILGR	8	46	429.7651603992086	857.5157678652172	2	429.764892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MGLVILGR_	ENST00000381165.3_1_17:5392660-5392717:+|nuORF	29.841539824830324	0.7289191502596711	1				NaN	NaN	0	NaN	4840	4033	8872
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8876	28.419	NaN	3504	30	0	341.83	0.106	+			15679	GVMTPLIKR	9	62	507.81025866110355	1013.6059643890071	2	507.8099365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GVMTPLIKR_	ENSG00000126803|ENST00000247207|HSPA2	69.6276240434122	0.14239879520340665	1				NaN	NaN	0	NaN	4841	4033	8872
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8877	28.42	NaN	3630.1	30	0	346.09	0.106	+			5320	ATVLYIVKK	9	69	517.8342474834899	1033.6539420337797	2	517.8344116210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATVLYIVKK_	ENSG00000113734|ENST00000351486|BNIP1;nc|ENSG00000113734|Q12981-1|BNIP1;nc|ENSG00000113734|Q12981-2|BNIP1;nc|ENSG00000113734|Q12981-3|BNIP1	106.88024417677582	0.032181361622142884	1				NaN	NaN	0	NaN	4842	4033	8872
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8878	28.422	NaN	1656	30	0	214.68	0.106			+	44826	TTSTWLRS	8	50	476.2484667646964	NaN	0	476.2484130859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TTSTWLRS_	REV__ENST00000264705.8_1_2:27447237-27447342:+|nuORF	39.252832667884924	1.7418937515398478	1				NaN	NaN	0	NaN	4843	4033	8872
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8879	28.424	NaN	1703.9	30	0	331.69	0.035	+			32934	REAIQCVDN	9	53	524.2483807325508	1046.4822085319015	2	524.2490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_REAIQCVDN_	ENSG00000039123|ENST00000230640|MTREX;ENST00000503165.5_1_5:54603841-54625205:+|nuORF	42.396135135203025	0.392153681582562	1				NaN	NaN	0	NaN	4844	4033	8872
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8890	28.45	NaN	1669.9	30	0	246.25	0.141	+			13520	GLQGPPGKL	9	42	433.75867798249413	865.5028030317883	2	433.7580261230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GLQGPPGKL_	ENSG00000165471|ENST00000674931|MBL2	60.29395666154354	0.21116425950210296	1				NaN	NaN	0	NaN	4852	4036	8889
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8899	28.472	NaN	4706.5	30	0	419.25	0.214				-1	TICALICGR	9	60	503.7618025185236	NaN	0	503.7618408203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_TIC(Carbamidomethyl (C))ALICGR_	ENSG00000104320|ENST00000265433|NBN;NBN|p.L654Afs*5|1|0.27|ENSG00000104320|chr8:89946251-89946252|-/T|frameshift_variant	44.116797842482775	0.2472372736944149	1				NaN	NaN	0	NaN	4858	4039	8898
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8900	28.475	NaN	2930.7	30	0	451.48	0.036	+			25471	LPRNEADEL	9	61	528.7696540291439	1055.5247551250877	2	528.7704467773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LPRNEADEL_	ENSG00000100342|ENST00000397278|APOL1;nc|ENSG00000100342|O14791-2|APOL1;nc|ENSG00000100342|O14791-3|APOL1	67.49366992349736	0.1516260258713357	1				NaN	NaN	0	NaN	4859	4039	8898
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8905	28.49	NaN	5614	30	0	556.66	0.214	+			25316	LPAREATQF	9	65	516.7782050989861	1031.541857264772	2	516.7769775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LPAREATQF_	ENSG00000183087|ENST00000327773|GAS6;ENST00000476291.1_1_13:114550749-114566917:-|nuORF;GAS6|p.G150Afs*49|1|0.17|ENSG00000183087|chr13:113839745-113839745|C/-|frameshift_variant;GAS6|p.N106Kfs*13|1|0.39|ENSG00000183087|chr13:113846552-113846553|-/T|frameshift_variant;GAS6|p.R151Pfs*27|1|0.41|ENSG00000183087|chr13:113839744-113839745|-/C|frameshift_variant;nc|ENSG00000183087|Q14393-1|GAS6	79.71258880314673	0.09879134589249085	1				NaN	NaN	0	NaN	4861	4042	8904
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8906	28.493	NaN	4498.5	30	0	826.77	0.106			+	-1	LRCVGQRAPV	10	52	385.88509467073675	1154.6334546124103	3	385.8851318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LRC(Carbamidomethyl (C))VGQRAPV_	REV__ENST00000374825.8_1_6:32940419-32940701:+|nuORF	22.579656572578934	0.6954366826851017	1				NaN	NaN	0	NaN	4862	4042	8904
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8907	28.495	NaN	1549.7	30	0	111.5	0.106	+			46303	VEKEMRVTL	9	53	552.8077881136768	NaN	0	552.8075561523438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VEKEMRVTL_	DYNC1H1|p.F2635Lfs*67|1|0.16|ENSG00000197102|chr14:102017141-102017141|T/-|frameshift_variant;DYNC1H1|p.G1902Vfs*27|2|0.27|ENSG00000197102|chr14:102006154-102006154|G/-|frameshift_variant;DYNC1H1|p.K3112Hfs*3|1|0.31|ENSG00000197102|chr14:102027998-102027999|-/TCACAAG|frameshift_variant;DYNC1H1|p.W4201Gfs*43|1|0.42|ENSG00000197102|chr14:102043958-102043958|G/-|frameshift_variant;ENSG00000197102|ENST00000360184|DYNC1H1	32.75053402867276	0.3122164853807509	1				NaN	NaN	0	NaN	4863	4042	8904
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8908	28.497	NaN	998.25	30	0	199.18	0.033	+			23777	LCLGRALL	8	41	429.7651603992086	857.5157678652172	2	429.76446533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LCLGRALL_	ENSG00000023839|ENST00000647814|ABCC2	13.775330524044264	0.789990904165365	1				NaN	NaN	0	NaN	4864	4042	8904
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8914	28.513	NaN	4316.5	30	0	654.35	0.214			+	18025	IIMGMATEL	9	63	497.75152189542996	993.4884908576599	2	497.7512512207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_IIMGM(Oxidation (M))ATEL_	REV__ENSG00000163993|ENST00000296370|S100P	65.80317337860623	0.1652391959156183	1				NaN	NaN	0	NaN	4867	4045	8913
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8915	28.517	NaN	1684.3	30	0	540.03	0.106				-1	 	0	29	329.21821544336467	656.4218779535294	2	329.2182312011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	4868	4045	8913
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8916	28.519	NaN	4227.3	30	0	663.71	0.106			+	28874	NQAAVQAVTTI	11	70	558.3060639258839	1114.5975749185677	2	558.3067016601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NQAAVQAVTTI_	REV__nc|ENSG858|P60608|ERVFC1-1	48.18798116849167	0.44590646720473764	1				NaN	NaN	0	NaN	4869	4045	8913
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8917	28.521	NaN	1550.8	30	0	222.47	0.106	+			5698	AVFDGAQVTSK	11	56	561.7927668241384	1121.5709807150768	2	561.7927856445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVFDGAQVTSK_	ENSG00000175274|ENST00000525680|TP53I11	43.41853373365257	0.5111670701941979	1				NaN	NaN	0	NaN	4870	4045	8913
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8918	28.522	NaN	2091.2	30	0	564.99	0.106	+			9866	EQESARQLQL	10	61	601.3118762660581	NaN	0	601.3114013671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EQESARQLQL_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	101.25262130126117	0.011307420405424463	1				NaN	NaN	0	NaN	4871	4045	8913
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8919	28.524	NaN	2218.6	30	0	1078	0.106			+	33283	RGLGGAGPSLP	11	50	491.2773921556774	980.5402313781548	2	491.2776184082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RGLGGAGPSLP_	REV__ENST00000374089.5_1_1:27425314-27425992:-|nuORF	36.446750945000026	0.6065623449959539	1				NaN	NaN	0	NaN	4872	4045	8913
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8920	28.526	NaN	2236.4	30	0	297.37	0.037	+			26603	LTYEFVKQK	9	59	578.3240583326277	1154.6335637320553	2	578.3237915039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LTYEFVKQK_	ENSG00000179222|ENST00000326587|MAGED1;ENST00000494718.5_1_X:51641614-51641740:+|nuORF;MAGED1|p.P628Rfs*18|1|0.09|ENSG00000179222|chrX:51900215-51900215|C/-|frameshift_variant;nc|ENSG00000179222|Q9Y5V3-2|MAGED1	140.11223852658463	0.010427410095706195	1				NaN	NaN	0	NaN	4873	4045	8913
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8924	28.54	NaN	4466.6	30	0	1714.9	0.214	+			50926	YGQQSTATL	9	58	484.7374641177951	967.4603753023903	2	484.73785400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YGQQSTATL_	ENSG00000154134|ENST00000397801|ROBO3;ENST00000527245.5_1_11:124747729-124748693:+|nuORF	71.87747018426188	0.13267044672804276	1				NaN	NaN	0	NaN	4874	4048	8923
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8925	28.544	NaN	5503	30	0	680.97	0.106				-1	 	0	63	564.8161542729957	1127.6177556127914	2	564.8169555664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	4875	4048	8923
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8926	28.546	NaN	3816.2	30	0	510.39	0.106	+			729	AEAYLGKTV	9	65	476.2609658470593	950.5073787609186	2	476.2610778808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEAYLGKTV_	ENSG00000109971|ENST00000534624|HSPA8;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;ENST00000456928.2_1_12:4206979-4207195:+|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;HSPA8|p.K569Dfs*6|1|0.3|ENSG00000109971|chr11:123058302-123058303|TC/-|frameshift_variant;nc|ENSG00000109971|P11142-2|HSPA8	68.84614121027924	0.14577793175421136	1				NaN	NaN	0	NaN	4876	4048	8923
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8927	28.548	NaN	1832.7	30	0	214.59	0.106	+			20287	KENSPEKFAL	10	67	581.808803035499	1161.6030531377978	2	581.809326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KENSPEKFAL_	ENSG00000099956|ENST00000644036|SMARCB1;nc|ENSG00000099956|Q12824-2|SMARCB1	29.550750289552195	0.6385079145554603	1				NaN	NaN	0	NaN	4877	4048	8923
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8928	28.549	NaN	1499.6	30	0	445.22	0.031				-1	 	0	37	351.23288416509797	700.451215396996	2	351.2331237792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	4878	4048	8923
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8932	28.563	NaN	1120.3	30	0	447.35	0.215	+			7071	CVGLWALR	8	38	459.25605557796035	916.4975582227207	2	459.255615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CVGLWALR_	ENSG00000008710|ENST00000262304|PKD1;nc|ENSG00000008710|P98161-2|PKD1;nc|ENSG00000008710|P98161-3|PKD1	44.53106598305862	0.628196326904373	1				NaN	NaN	0	NaN	4879	4051	8931
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8933	28.567	NaN	1890.5	30	0	213.47	0.036			+	-1	DILFCKWL	8	61	547.7898662194407	1093.5651795056813	2	547.7908935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_DILFC(Carbamidomethyl (C))KWL_	REV__ENST00000339728.5_1_2:235401734-235401923:-|nuORF	38.80614096846853	0.6637206697844082	1				NaN	NaN	0	NaN	4880	4051	8931
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8939	28.582	NaN	3054	30	0	253.3	0.214	+			28119	NAIKESYDY	9	65	551.7557149606403	1101.4968769880804	2	551.7567749023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAIKESYDY_	EED|p.H305Qfs*14|1|0.09|ENSG00000074266|chr11:86268500-86268501|-/AGACATAC|frameshift_variant;ENSG00000074266|ENST00000263360|EED;ENST00000525244.5_1_11:85956313-85988207:+|nuORF;nc|ENSG00000074266|O75530-2|EED;nc|ENSG00000074266|O75530-3|EED	75.04331003522576	0.118981335847003	1				NaN	NaN	0	NaN	4883	4054	8938
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8940	28.585	NaN	1215.9	30	0	177.85	0.034			+	25802	LSAVSTWNG	9	46	467.7353154202388	933.4560779072776	2	467.73443603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSAVSTWNG_	REV__WWOX|p.K274Nfs*53|1|0.24|ENSG00000186153|chr16:78432515-78432515|A/-|frameshift_variant	51.33545320467046	0.2872990594074956	1				NaN	NaN	0	NaN	4884	4054	8938
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8949	28.606	NaN	2506.9	30	0	505.41	0.214				-1	ASTKKVVMK	9	39	336.53427396149993	NaN	0	336.5343933105469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ASTKKVVM(Oxidation (M))K_	CFAP47|p.F1567Vfs*4|1|0.31|ENSG00000165164|chrX:36098829-36098830|-/G|frameshift_variant;CFAP47|p.H2345Afs*15|1|0.09|ENSG00000165164|chrX:36236809-36236810|-/A|frameshift_variant;CFAP47|p.K734Nfs*6|1|0.13|ENSG00000165164|chrX:35971909-35971909|A/-|frameshift_variant;CFAP47|p.P2326Tfs*34|1|0.26|ENSG00000165164|chrX:36236751-36236752|-/A|frameshift_variant;ENSG00000165164|ENST00000378653|CFAP47;nc|ENSG00000165164|Q6ZTR5-1|CFAP47;nc|ENSG00000165164|Q6ZTR5-2|CFAP47;nc|ENSG00000165164|Q6ZTR5-6|CFAP47	23.52269567125451	0.3573684076213556	1				NaN	NaN	0	NaN	4890	4057	8948
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8950	28.609	NaN	2451.5	30	0	240.93	0.106	+			42579	TASSGHYIAY	10	52	535.251362587085	1068.48817224097	2	535.2512817382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TASSGHYIAY_	ENSG00000077254|ENST00000370794|USP33;nc|ENSG00000077254|Q8TEY7-3|USP33;nc|ENSG00000077254|Q8TEY7|USP33;USP33|p.I935Lfs*3|1|0.1|ENSG00000077254|chr1:77697343-77697343|T/-|frameshift_variant	35.61828744233558	0.588957954432594	1				NaN	NaN	0	NaN	4891	4057	8948
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8951	28.611	NaN	1235	30	0	261.39	0.034			+	48101	VSTPSVMLK	9	52	481.2727430775089	960.5309332218178	2	481.2721252441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSTPSVMLK_	REV__E2F8|p.T831Ifs*21|1|0.05|ENSG00000129173|chr11:19224770-19224771|-/TTTAA|frameshift_variant;REV__ENSG00000129173|ENST00000250024|E2F8	37.15910966729921	0.4535818937225704	1				NaN	NaN	0	NaN	4892	4057	8948
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8957	28.627	NaN	6148.1	30	0	733.18	0.143	+			50446	YADVGGKQF	9	55	492.74267503942576	983.4707971456515	2	492.7423095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YADVGGKQF_	ENSG00000180879|ENST00000370086|SSR4;ENST00000460616.5_1_X:153061851-153063636:+|nuORF;ENST00000485612.5_1_X:153061851-153063885:+|nuORF	136.26810882979174	0.012230845423532208	1				NaN	NaN	0	NaN	4895	4060	8956
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8964	28.647	NaN	1619.2	30	0	357.24	0.141			+	24700	LHETSFAP	8	35	451.22415483907747	900.433756744955	2	451.2243347167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LHETSFAP_	REV__ENSG00000166106|ENST00000299164|ADAMTS15	20.481830146152948	0.8005983782650069	1				NaN	NaN	0	NaN	4899	4063	8963
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8970	28.665	NaN	2863.7	30	0	338.4	0.214	+			20027	KEITALAPST	10	56	515.7926921160798	1029.5708312989595	2	515.7926635742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEITALAPST_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000184009|ENST00000573283|ACTG1;ENST00000415776.1_1_Y:19868883-19869072:-|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000493945.5_1_7:5567381-5567853:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2	40.05817265558897	0.5486090488315611	1				NaN	NaN	0	NaN	4902	4066	8969
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8971	28.669	NaN	4312.4	30	0	499.79	0.106	+			42099	SYISRTNQL	9	64	541.2851707584291	1080.555788583658	2	541.2859497070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SYISRTNQL_	AHCTF1|p.E1870Kfs*19|1|0.27|ENSG00000153207|chr1:246850426-246850426|T/-|frameshift_variant;AHCTF1|p.G1113Wfs*13|1|0.07|ENSG00000153207|chr1:246867281-246867282|-/A|frameshift_variant;ENSG00000153207|ENST00000648844|AHCTF1;nc|ENSG00000153207|Q8WYP5-2|AHCTF1;nc|ENSG00000153207|Q8WYP5-3|AHCTF1	84.81729255234993	0.07947707105691067	1				NaN	NaN	0	NaN	4903	4066	8969
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8972	28.671	NaN	1384.2	30	0	152.51	0.035	+			23340	KYTEGVQSL	9	44	512.7693619501114	1023.5241709670228	2	512.76904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KYTEGVQSL_	ENSG00000092201|ENST00000216297|SUPT16H;ENST00000537175.1_1_12:16552211-16552709:-|nuORF	61.691277971877994	0.19951612995419254	1				NaN	NaN	0	NaN	4904	4066	8969
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8980	28.69	NaN	4482.5	30	0	1068.2	0.214	+			34077	RSPPPGMGL	9	49	456.2417644345112	910.4689759358224	2	456.2416687011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RSPPPGMGL_	ENSG00000116560|ENST00000357214|SFPQ;nc|ENSG00000116560|P23246-2|SFPQ	87.69643885390035	0.07135982304947239	1				NaN	NaN	0	NaN	4909	4069	8979
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8981	28.694	NaN	1558.6	30	0	217.45	0.106			+	9129	EGLKQMKE	8	46	481.75205109284	961.4895492524801	2	481.7519836425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EGLKQMKE_	REV__ENSG00000089006|ENST00000377759|SNX5;REV__ENST00000490175.5_1_20:17923003-17949420:-|nuORF	56.72105179125745	0.5342425954139568	1				NaN	NaN	0	NaN	4910	4069	8979
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8982	28.696	NaN	1065.1	30	0	78.045	0.106	+			24054	LEHQVRVGF	9	41	362.20140679078236	NaN	0	362.201904296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LEHQVRVGF_	ENSG00000158201|ENST00000289119|ABHD3;ENST00000579875.5_1_18:19244061-19284599:-|nuORF;ENST00000579982.1_1_18:19282269-19284734:-|nuORF;nc|ENSG00000158201|Q8WU67-2|ABHD3	34.172542307311794	0.30503706118289736	1				NaN	NaN	0	NaN	4911	4069	8979
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8983	28.698	NaN	1270.9	30	0	143.14	0.032				-1	CCCCSCSCL	9	38	384.772175594106	NaN	0	384.7718811035156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	4 Carbamidomethyl (C)	_C(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))SCSCL_	ENSG00000091844|ENST00000206262|RGS17;ENSG00000147509|ENST00000297313|RGS20;nc|ENSG00000147509|O76081-2|RGS20;nc|ENSG00000147509|O76081-5|RGS20;nc|ENSG00000147509|O76081-6|RGS20	9.705651100619752	0.40413237678333463	1				NaN	NaN	0	NaN	4912	4069	8979
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8989	28.712	NaN	2613.3	30	0	966.61	0.214			+	10771	FAGGQALVT	9	44	432.23454450649484	862.4545360797897	2	432.23443603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FAGGQALVT_	REV__ENSG00000123352|ENST00000552918|SPATS2	64.20726635412375	0.17854274437659667	1				NaN	NaN	0	NaN	4915	4072	8988
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8990	28.716	NaN	2502.4	30	0	317.13	0.038	+			37186	SIYSVSPEANK	11	63	597.8037698694868	1193.5929868057735	2	597.8043212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SIYSVSPEANK_	ENSG00000068784|ENST00000263736|SRBD1;ENST00000475073.5_1_2:45647031-45774722:-|nuORF;nc|ENSG00000068784|Q8N5C6-2|SRBD1;SRBD1|p.T783Ifs*12|1|0.05|ENSG00000068784|chr2:45413279-45413280|-/CCAAA|frameshift_variant	53.08895987439943	0.38514566451266113	1				NaN	NaN	0	NaN	4916	4072	8988
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8998	28.736	NaN	2128.1	30	0	294.68	0.214	+			12431	GEASKLQQF	9	61	504.2611566835548	1006.5077604339097	2	504.2596740722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEASKLQQF_	ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1	104.42354056486148	0.0346881550498418	1				NaN	NaN	0	NaN	4921	4075	8997
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	8999	28.74	NaN	2910.9	30	0	375.27	0.038			+	37343	SLESLIQEPVS	11	61	601.3189456076217	1200.6233382820433	2	601.8204956054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLESLIQEPVS_	REV__ENST00000606011.1_1_13:96328766-96328880:-|nuORF	43.650786325866115	0.5079891456189096	1				NaN	NaN	0	NaN	4922	4075	8997
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9007	28.758	NaN	2332.9	30	0	265.87	0.212	+			26460	LTIQSGEQPYK	11	71	632.3323726229085	1262.6501923126168	2	632.3330688476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LTIQSGEQPYK_	ENSG00000168653|ENST00000372969|NDUFS5	115.23196543181992	0.02934640941715571	1				NaN	NaN	0	NaN	4927	4078	9006
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9008	28.761	NaN	2334.9	30	0	1075.6	0.106			+	33724	RPGTGVVPL	9	40	448.27152507699583	894.5284972207917	2	448.27154541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RPGTGVVPL_	REV__ENST00000585839.5_1_19:14580313-14582593:+|nuORF	23.04248740728303	0.5879033540491928	1				NaN	NaN	0	NaN	4928	4078	9006
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9009	28.763	NaN	1291.8	30	0	139.81	0.106	+			4450	ATILAGTANVK	11	48	529.8132934570312	NaN	0	529.8132934570312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATILAGTANVK_	ENSG00000066455|ENST00000163416|GOLGA5;GOLGA5|p.M705Ifs*10|1|0.1|ENSG00000066455|chr14:92837439-92837440|-/TA|frameshift_variant;nc|ENSG00000066455|Q8TBA6-2|GOLGA5	59.93077597824379	0.23351441018439056	1				NaN	NaN	0	NaN	4929	4078	9006
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9010	28.765	NaN	1241.7	30	0	345.25	0.106				-1	QLCAAQAVL	9	38	325.17740870697827	NaN	0	324.8426513671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_QLC(Carbamidomethyl (C))AAQAVL_	FRMPD3|p.S820L|1|0.16|ENSG00000147234|chrX:107600399-107600399|C/T|missense_variant	32.81241826257853	0.3119040447479903	1				NaN	NaN	0	NaN	4930	4078	9006
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9011	28.767	NaN	1806.1	30	0	202.46	0.106	+			27882	MTLEYNSKY	9	57	574.7682571059873	1147.5219612787746	2	574.7694091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MTLEYNSKY_	PPP1R32|p.S177L|1|0.32|ENSG00000162148|chr11:61485357-61485357|C/T|missense_variant	39.252832667884924	0.4290233611298554	1				NaN	NaN	0	NaN	4931	4078	9006
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9012	28.769	NaN	1390.8	30	0	231.79	0.106	+			49508	VWKDIHLGCL	10	41	592.31884765625	NaN	0	592.31884765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VWKDIHLGCL_	ENST00000510994.5_1_3:134204333-134204429:-|nuORF	31.954861631926434	0.3952518850925832	1				NaN	NaN	0	NaN	4932	4078	9006
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9013	28.771	NaN	2645.8	30	0	571.86	0.035			+	3454	ASRHIKPLS	9	38	336.86848412530804	NaN	0	336.8688049316406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASRHIKPLS_	REV__ENSG00000157764|ENST00000646891|BRAF;REV__ENST00000479537.5_1_7:140434399-140447180:-|nuORF;REV__ENST00000497784.1_2_7:140434399-140508041:-|nuORF	18.262085536374414	0.37517301184500873	1				NaN	NaN	0	NaN	4933	4078	9006
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9023	28.794	NaN	4586	30	0	688.25	0.213	+			41040	SVIDTSTIVRK	11	72	609.8557598717473	1217.6969668102945	2	609.85595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVIDTSTIVRK_	ENSG00000115808|ENST00000263918|STRN;ENST00000495595.1_1_2:37111179-37129881:-|nuORF;nc|ENSG00000115808|O43815-2|STRN;STRN|p.V346*|1|0.24|ENSG00000115808|chr2:36886722-36886722|C/-|frameshift_variant	119.02804511558764	0.02204929902418289	1				NaN	NaN	0	NaN	4940	4081	9022
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9024	28.798	NaN	2564.3	30	0	308.3	0.106	+			14083	GSLFLRTPK	9	55	509.80585768460975	1017.5971624360195	2	509.80609130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSLFLRTPK_	ENSG00000134333|ENST00000422447|LDHA;ENST00000437325.2_1_1:235901419-235901638:+|nuORF;ENST00000494573.6_1_11:18418389-18421097:+|nuORF;LDHA|p.E176Kfs*8|1|0.28|ENSG00000134333|chr11:18402943-18402943|G/-|frameshift_variant;LDHA|p.W227Tfs*16|1|0.06|ENSG00000134333|chr11:18403779-18403780|-/AC|frameshift_variant;nc|ENSG00000134333|P00338-2|LDHA;nc|ENSG00000134333|P00338-3|LDHA;nc|ENSG00000134333|P00338-4|LDHA;nc|ENSG00000134333|P00338-5|LDHA	99.01295224348159	0.040209060045561164	1				NaN	NaN	0	NaN	4941	4081	9022
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9025	28.8	NaN	2043.1	30	0	311.98	0.106			+	28884	NQFPVWLS	8	59	495.7544141336403	989.4942753340806	2	495.7547302246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NQFPVWLS_	REV__ENSG00000182831|ENST00000327827|HAPSTR1;REV__nc|ENSG00000182831|Q14CZ0-2|HAPSTR1	50.0245360154114	0.5941082100236891	1				NaN	NaN	0	NaN	4942	4081	9022
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9026	28.801	NaN	2130.1	30	0	548.19	0.106				-1	 	0	68	572.2725104192868	571.2652339526868	1	572.2723388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	4943	4081	9022
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9027	28.803	NaN	6207.5	30	0	4245.4	0.106	+			41041	SVIDTSTIVRK	11	34	406.9064793821126	1217.6976087465378	3	406.9068908691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVIDTSTIVRK_	ENSG00000115808|ENST00000263918|STRN;ENST00000495595.1_1_2:37111179-37129881:-|nuORF;nc|ENSG00000115808|O43815-2|STRN;STRN|p.V346*|1|0.24|ENSG00000115808|chr2:36886722-36886722|C/-|frameshift_variant	18.531049691330335	0.7837198200183355	1				NaN	NaN	0	NaN	4944	4081	9022
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9028	28.805	NaN	1341.1	30	0	173.55	0.106	+			3287	ASLQSIIHK	9	54	498.7953565105973	NaN	0	498.7955322265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASLQSIIHK_	ENSG00000095787|ENST00000354911|WAC;nc|ENSG00000095787|Q9BTA9-2|WAC;nc|ENSG00000095787|Q9BTA9-3|WAC;nc|ENSG00000095787|Q9BTA9-5|WAC	64.20726635412375	0.13137488984569443	1				NaN	NaN	0	NaN	4945	4081	9022
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9029	28.807	NaN	917.37	30	0	158.41	0.035	+			2196	ALPEDHGTY	9	37	501.72985357744113	NaN	0	501.73028564453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ALPEDHGTY_	ENSG00000065534|ENST00000360304|MYLK;ENST00000514623.1_1_3:123428573-123453020:-|nuORF;MYLK|p.P1126Qfs*8|1|0.11|ENSG00000065534|chr3:123700091-123700091|G/-|frameshift_variant;MYLK|p.R823Gfs*27|1|0.14|ENSG00000065534|chr3:123701002-123701002|C/-|frameshift_variant;nc|ENSG00000065534|Q15746-2|MYLK;nc|ENSG00000065534|Q15746-3|MYLK;nc|ENSG00000065534|Q15746-4|MYLK;nc|ENSG00000065534|Q15746-5|MYLK;nc|ENSG00000065534|Q15746-6|MYLK	21.9598887501803	0.3626577482100488	1				NaN	NaN	0	NaN	4946	4081	9022
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9037	28.827	NaN	1569.6	30	0	136.35	0.214	+			31951	QQRLPIFK	8	54	515.3134012270117	1028.6122495208233	2	515.3134155273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QQRLPIFK_	DNAH12|p.E1339Gfs*6|1|0.27|ENSG00000174844|chr3:57446125-57446126|-/C|frameshift_variant;DNAH12|p.F1712Lfs*4|1|0.34|ENSG00000174844|chr3:57428681-57428681|A/-|frameshift_variant;DNAH12|p.H2653Sfs*22|1|0.24|ENSG00000174844|chr3:57314595-57314596|-/A|frameshift_variant;DNAH12|p.K1023Nfs*9|3|0.34|ENSG00000174844|chr3:57457919-57457919|T/-|frameshift_variant;DNAH12|p.L560*|1|0.37|ENSG00000174844|chr3:57472643-57472643|A/-|frameshift_variant;ENSG00000174844|ENST00000495027|DNAH12;nc|ENSG00000174844|Q6ZR08-4|DNAH12;nc|ENSG00000174844|Q6ZR08|DNAH12	49.44154591367651	0.597725784090933	1				NaN	NaN	0	NaN	4951	4084	9036
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9038	28.83	NaN	1603	30	0	380.58	0.106	+			5466	AVAAFQVEK	9	56	481.76850066606755	961.5224483989351	2	481.768798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVAAFQVEK_	ENSG00000185000|ENST00000528718|DGAT1;ENST00000525371.1_1_8:145542007-145542573:-|nuORF;ENST00000531896.5_1_8:145541583-145550314:-|nuORF	87.69643885390035	0.07135982304947239	1				NaN	NaN	0	NaN	4952	4084	9036
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9039	28.832	NaN	1532.8	30	0	561	0.106			+	27039	LYVWPQKED	9	54	589.2976163748605	1176.5806798165208	2	589.2977294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LYVWPQKED_	REV__ENSG00000197329|ENST00000358912|PELI1;REV__PELI1|p.V299I|1|0.11|ENSG00000197329|chr2:64095064-64095064|C/T|missense_variant	30.503639358989545	0.5181749237905803	1				NaN	NaN	0	NaN	4953	4084	9036
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9040	28.834	NaN	2130.5	30	0	253.74	0.106	+			49692	VYKPAQNSW	9	61	546.7766790248676	1091.538805116535	2	546.7775268554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VYKPAQNSW_	ENSG00000120696|ENST00000379483|KBTBD7;ENSG00000165572|ENST00000379485|KBTBD6;KBTBD6|p.C613Afs*34|1|0.51|ENSG00000165572|chr13:41130675-41130675|A/-|frameshift_variant	64.20726635412375	0.17854274437659667	1				NaN	NaN	0	NaN	4954	4084	9036
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9041	28.836	NaN	1328	30	0	167.52	0.106			+	10538	EWSQHLSRQQ	10	47	649.8179321289062	NaN	0	649.8179321289062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EWSQHLSRQQ_	REV__nc|ENSG00000250486|Q96MZ4|FAM218A	21.68575002086885	0.4201028297492154	1				NaN	NaN	0	NaN	4955	4084	9036
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9042	28.838	NaN	1571.2	30	0	153.66	0.036	+			26269	LSTHLKLFP	9	52	528.3160056206194	1054.6174583080387	2	528.31640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSTHLKLFP_	ENSG00000171860|ENST00000307637|C3AR1	87.75429964447693	0.0711966946989736	1				NaN	NaN	0	NaN	4956	4084	9036
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9050	28.857	NaN	2029.7	30	0	260.6	0.214	+			17315	IAEVAAAVVA	10	58	457.2710302749	912.5275076166	2	457.2708435058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IAEVAAAVVA_	ENSG00000117472|ENST00000372003|TSPAN1	55.50420428727701	0.4067289358710215	1				NaN	NaN	0	NaN	4961	4087	9049
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9051	28.861	NaN	3273.8	30	0	1273.2	0.106			+	7630	DKILKEVSL	9	41	348.8811035148133	NaN	0	348.8812255859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DKILKEVSL_	REV__APOB|p.A2932Pfs*19|1|0.36|ENSG00000084674|chr2:21008074-21008074|C/-|frameshift_variant;REV__APOB|p.G1921Efs*13|1|0.19|ENSG00000084674|chr2:21011106-21011106|C/-|frameshift_variant;REV__APOB|p.K4541Sfs*8|1|0.34|ENSG00000084674|chr2:21001800-21001800|T/-|frameshift_variant;REV__APOB|p.M1189*|1|0.34|ENSG00000084674|chr2:21015204-21015204|T/-|frameshift_variant;REV__APOB|p.S3866Yfs*21|1|0.06|ENSG00000084674|chr2:21005271-21005272|-/TAAGAAAT|frameshift_variant;REV__APOB|p.Y2149Vfs*2|2|0.29|ENSG00000084674|chr2:21010424-21010425|-/T|frameshift_variant;REV__ENSG00000084674|ENST00000233242|APOB	34.172542307311794	0.30503706118289736	1				NaN	NaN	0	NaN	4962	4087	9049
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9052	28.863	NaN	2355.5	30	0	311.81	0.106	+			7412	DEKLIKSVI	9	64	522.8181410632784	1043.6217291933567	2	522.8182373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DEKLIKSVI_	ECT2|p.K832Rfs*25|1|0.1|ENSG00000114346|chr3:172815693-172815693|A/-|frameshift_variant;ENSG00000114346|ENST00000392692|ECT2;nc|ENSG00000114346|Q9H8V3-3|ECT2	56.43379154798735	0.2433427591689151	1				NaN	NaN	0	NaN	4963	4087	9049
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9053	28.865	NaN	1675.6	30	0	200.53	0.106			+	32884	RDKSISLLE	9	55	530.8038034572899	1059.5930539813796	2	530.80517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RDKSISLLE_	REV__RP1L1|p.L1157R|1|0.37|ENSG00000183638|chr8:10610628-10610628|A/C|missense_variant	56.43379154798735	0.2433427591689151	1				NaN	NaN	0	NaN	4964	4087	9049
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9054	28.866	NaN	1290.1	30	0	210.14	0.106			+	39764	STIVGGPA	8	39	351.19627992572754	700.3780069182551	2	351.1958923339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STIVGGPA_	REV__ENSG00000114030|ENST00000344337|KPNA1	29.841539824830324	0.7289191502596711	1				NaN	NaN	0	NaN	4965	4087	9049
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9055	28.868	NaN	1255.3	30	0	105.68	0.032	+			17365	IALPGGGW	8	41	385.7135946395481	769.4126363458962	2	385.7132568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IALPGGGW_	ENST00000471864.1_1_9:38621862-38622117:+|nuORF;nc|ENSG00000204860|Q5SY85|FAM201A	33.49298260027079	0.7007254697536482	1				NaN	NaN	0	NaN	4966	4087	9049
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9061	28.884	NaN	4047	30	0	865.59	0.214	+			1786	AIFGGFKSK	9	65	477.7736955144008	953.5328380956016	2	477.7737121582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AIFGGFKSK_	ENSG00000248144|ENST00000515683|ADH1C	65.46538089061403	0.16805504838372562	1				NaN	NaN	0	NaN	4969	4090	9060
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9062	28.888	NaN	2521.5	30	0	215.17	0.106	+			36596	SGATIRIFK	9	62	496.7977621872198	991.5809714412396	2	496.7980041503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SGATIRIFK_	ENSG00000100596|ENST00000216484|SPTLC2;ENSG00000172296|ENST00000399002|SPTLC3	78.26377905018397	0.10505600812668463	1				NaN	NaN	0	NaN	4970	4090	9060
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9063	28.89	NaN	2169.6	30	0	307.61	0.106				-1	 	0	60	564.8161542729957	1127.6177556127914	2	564.8168334960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	4971	4090	9060
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9064	28.892	NaN	3635	30	0	978.4	0.106			+	33669	RNLIYVSK	8	43	331.53435876066044	991.5812468821814	3	331.5343017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RNLIYVSK_	REV__SF3B3|p.L140S|1|0.13|ENSG00000189091|chr16:70530766-70530766|T/C|missense_variant	31.954861631926434	0.7126016770032289	1				NaN	NaN	0	NaN	4972	4090	9060
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9065	28.893	NaN	1883.9	30	0	225.69	0.106	+			45106	TVIQSTQGMYK	11	53	628.3201359609109	1254.6257189886217	2	628.3193969726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TVIQSTQGMYK_	ENSG00000165434|ENST00000298198|PGM2L1;PGM2L1|p.S149Qfs*22|1|0.29|ENSG00000165434|chr11:74370928-74370928|A/-|frameshift_variant;PGM2L1|p.S299Lfs*19|1|0.24|ENSG00000165434|chr11:74347192-74347192|A/-|frameshift_variant	102.95473732560676	0.05457861179418332	1				NaN	NaN	0	NaN	4973	4090	9060
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9066	28.895	NaN	1384.2	30	0	124.65	0.106			+	50995	YIRNVLEQ	8	58	517.7842926255277	NaN	0	517.7841186523438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YIRNVLEQ_	REV__CARD11|p.R555Gfs*45|6|0.44|ENSG00000198286|chr7:2928689-2928689|G/-|frameshift_variant;REV__ENSG00000198286|ENST00000396946|CARD11	44.116797842482775	1.7418937515398478	1				NaN	NaN	0	NaN	4974	4090	9060
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9067	28.897	NaN	1925.1	30	0	460.93	0.032	+			42337	TAGPAVHL	8	38	383.21628174683565	764.4180105604713	2	383.21624755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TAGPAVHL_	ENSG00000175221|ENST00000325464|MED16;nc|ENSG00000175221|Q9Y2X0-2|MED16;nc|ENSG00000175221|Q9Y2X0-3|MED16;nc|ENSG00000175221|Q9Y2X0-4|MED16;nc|ENSG00000175221|Q9Y2X0-5|MED16	21.70233525837049	0.7917639344264583	1				NaN	NaN	0	NaN	4975	4090	9060
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9075	28.917	NaN	5971.5	30	0	611.07	0.214	+			28363	NEKVIEHIM	9	78	556.7913159820561	1111.568079030912	2	556.7922973632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NEKVIEHIM_	ENSG00000163220|ENST00000368738|S100A9	112.2953585152457	0.026655838328212944	1				NaN	NaN	0	NaN	4980	4093	9074
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9076	28.92	NaN	1123	30	0	216.01	0.106	+			25383	LPHSAMPV	8	41	426.2255041511045	850.436455369009	2	426.2253112792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LPHSAMPV_	ENST00000486360.1_1_1:203045416-203045515:+|nuORF	29.841539824830324	0.7289191502596711	1				NaN	NaN	0	NaN	4981	4093	9074
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9077	28.922	NaN	1909.3	30	0	306.68	0.106	+			8040	DTVPTESLARA	11	50	580.3026679338093	1158.5907829344185	2	580.3031616210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DTVPTESLARA_	nc|ENSG00000182871|P39060-1|COL18A1;nc|ENSG00000182871|P39060|COL18A1	29.170058357718403	0.683821074385409	1				NaN	NaN	0	NaN	4982	4093	9074
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9078	28.924	NaN	1634.7	30	0	498.65	0.106			+	20592	KGAAKKTAFP	10	30	340.20613911917746	1017.5965879577325	3	340.2060241699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KGAAKKTAFP_	REV__tr|U7SSD2|U7SSD2_FUSNUPyruvate:ferredoxin(Flavodoxin)oxidoreductaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01591PE=3SV=1	27.047317107675042	0.6589519614906109	1				NaN	NaN	0	NaN	4983	4093	9074
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9079	28.926	NaN	1478.8	30	0	168.23	0.106			+	10833	FASGNVDFF	9	51	502.22888133731715	NaN	0	502.2275085449219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FASGNVDFF_	REV__ENSG00000204347|ENST00000375366|BTBD17	38.80614096846853	0.28164298475537564	1				NaN	NaN	0	NaN	4984	4093	9074
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9080	28.928	NaN	1916.8	30	0	198.88	0.106	+			33267	RGGGPVEHYHL	11	44	611.3089264414391	1220.603299949678	2	611.3090209960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RGGGPVEHYHL_	ENSG00000159267|ENST00000674895|HLCS;nc|ENSG00000159267|P50747|HLCS	18.262085536374414	0.7849791996189919	1				NaN	NaN	0	NaN	4985	4093	9074
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9081	28.929	NaN	1338.1	30	0	145.63	0.034	+			2389	ANSHYFAL	8	49	461.7241720932143	NaN	0	461.7240905761719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ANSHYFAL_	ENSG00000196547|ENST00000559717|MAN2A2;ENST00000558640.5_1_15:91449600-91450513:+|nuORF;ENST00000560192.5_1_15:91447248-91454469:+|nuORF;MAN2A2|p.V832Rfs*6|1|0.43|ENSG00000196547|chr15:90912894-90912895|-/C|frameshift_variant;nc|ENSG00000196547|P49641-1|MAN2A2;nc|ENSG00000196547|P49641-2|MAN2A2	37.15910966729921	1.7418937515398478	1				NaN	NaN	0	NaN	4986	4093	9074
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9092	28.953	NaN	3443.3	30	0	937.46	0.214	+			19044	IYGSSHSW	8	51	468.7140083666074	935.4134638000148	2	468.7138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IYGSSHSW_	DUOX1|p.S186N|1|0.29|ENSG00000137857|chr15:45135535-45135535|G/A|missense_variant;ENSG00000137857|ENST00000389037|DUOX1;ENSG00000140279|ENST00000389039|DUOX2;nc|ENSG00000140279|Q9NRD8|DUOX2	68.484700416344	0.4195245774506064	1				NaN	NaN	0	NaN	4994	4096	9091
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9093	28.957	NaN	1688.3	30	0	231.61	0.106	+			46437	VERVNEPSI	9	54	521.7798724546716	1041.545191976143	2	521.7800903320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VERVNEPSI_	ENSG00000100342|ENST00000397278|APOL1;nc|ENSG00000100342|O14791-2|APOL1;nc|ENSG00000100342|O14791-3|APOL1	56.72105179125745	0.24094814563026265	1				NaN	NaN	0	NaN	4995	4096	9091
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9094	28.959	NaN	1743.9	30	0	287.03	0.106			+	31792	QPLLSHTVI	9	37	336.53427396149993	NaN	0	336.53436279296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QPLLSHTVI_	REV__ENST00000445995.2_1_9:98056039-98057089:+|nuORF	24.20275056022122	0.35506675290109213	1				NaN	NaN	0	NaN	4996	4096	9091
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9095	28.961	NaN	2329.9	30	0	499.25	0.106			+	30047	PPVKTIDVPL	10	73	539.8288975809045	1077.6432422286089	2	539.830322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PPVKTIDVPL_	REV__CC2D1A|p.G898Vfs*45|1|0.32|ENSG00000132024|chr19:13929638-13929638|G/-|frameshift_variant;REV__ENSG00000132024|ENST00000318003|CC2D1A;REV__ENST00000589138.5_1_19:14029331-14037891:+|nuORF;REV__nc|ENSG00000132024|Q6P1N0-2|CC2D1A	42.33807565288922	0.5276008846745733	1				NaN	NaN	0	NaN	4997	4096	9091
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9096	28.962	NaN	2637.2	30	0	727.34	0.106	+			14591	GTGALILQK	9	57	450.7789413405087	899.5433297478174	2	450.77880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTGALILQK_	ENSG00000149418|ENST00000278742|ST14	134.81075121484326	0.012914550297035062	1				NaN	NaN	0	NaN	4998	4096	9091
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9097	28.964	NaN	1291.2	30	0	508.16	0.106			+	35761	SDVSQIVL	8	36	430.73974540191244	859.4649378706249	2	430.7391052246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SDVSQIVL_	REV__FAT4|p.A1287S|1|0.14|ENSG00000196159|chr4:125320270-125320270|G/T|missense_variant	30.503639358989545	0.7238069182250283	1				NaN	NaN	0	NaN	4999	4096	9091
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9098	28.966	NaN	1360.6	30	0	126.05	0.035			+	29772	PICTSFTKS	9	53	492.2472839355469	NaN	0	492.2472839355469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PICTSFTKS_	REV__ENSG00000198452|ENST00000641545|OR14L1P;REV__ENST00000419087.1_1_1:247782982-247783861:+|nuORF	37.81151784470057	0.28666463014928195	1				NaN	NaN	0	NaN	5000	4096	9091
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9104	28.982	NaN	6420.2	30	0	1017.2	0.214	+			42895	TEHINIHQL	9	58	368.86459682463806	1103.5719610741141	3	368.8646545410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEHINIHQL_	ENSG00000180353|ENST00000314583|HCLS1;ENST00000481314.5_1_3:121363541-121379717:-|nuORF;ENST00000487290.5_1_3:121363549-121379717:-|nuORF;nc|ENSG00000180353|P14317-2|HCLS1	54.776311868738084	0.25715957988447635	1				NaN	NaN	0	NaN	5003	4099	9103
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9105	28.986	NaN	1090.7	30	0	104.84	0.106	+			23983	LDVSGPKV	8	43	407.7369894501553	813.4594259671106	2	407.7369079589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LDVSGPKV_	AHNAK|p.A4215V|1|0.31|ENSG00000124942|chr11:62521773-62521773|G/A|missense_variant;AHNAK|p.I4226V|1|0.1|ENSG00000124942|chr11:62521741-62521741|T/C|missense_variant;AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK;ENSG00000124942|ENST00000378024|AHNAK;ENSG00000124942|ENST00000378024|AHNAK;ENSG00000124942|ENST00000378024|AHNAK;ENSG00000124942|ENST00000378024|AHNAK	66.42927471994793	0.4381325844043345	1				NaN	NaN	0	NaN	5004	4099	9103
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9106	28.988	NaN	1283.7	30	0	448.11	0.106	+			47751	VSGPNVAHL	9	25	447.2453435989735	892.476134264747	2	447.2450866699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSGPNVAHL_	ENSG00000048707|ENST00000620676|VPS13D;nc|ENSG00000048707|Q5THJ4-2|VPS13D;VPS13D|p.K3964Nfs*34|1|0.09|ENSG00000048707|chr1:12403831-12403831|A/-|frameshift_variant	35.61828744233558	0.47037581924408073	1				NaN	NaN	0	NaN	5005	4099	9103
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9107	28.989	NaN	2156.9	30	0	362.01	0.106			+	11304	FKSRDQIPV	9	64	545.3058171777951	1088.5970814223901	2	545.3065185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FKSRDQIPV_	REV__ENSG00000136897|ENST00000374865|MRPL50;REV__ENST00000416821.1_1_2:204180115-204180217:-|nuORF;REV__MRPL50|p.N131S|1|0.22|ENSG00000136897|chr9:101390551-101390551|T/C|missense_variant	37.81151784470057	0.4459294069877048	1				NaN	NaN	0	NaN	5006	4099	9103
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9108	28.991	NaN	2132.6	30	0	327.21	0.036	+			42896	TEHINIHQL	9	60	552.7925490340699	1103.5705451349397	2	552.7952270507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TEHINIHQL_	ENSG00000180353|ENST00000314583|HCLS1;ENST00000481314.5_1_3:121363541-121379717:-|nuORF;ENST00000487290.5_1_3:121363549-121379717:-|nuORF;nc|ENSG00000180353|P14317-2|HCLS1	51.19269402634007	0.2889735674168909	1				NaN	NaN	0	NaN	5007	4099	9103
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9115	29.009	NaN	1560.1	30	0	272.55	0.214	+			36638	SGKFKSDAF	9	47	493.75079590071556	985.4870388682311	2	493.7508239746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SGKFKSDAF_	tr|U7SSN0|U7SSN0_FUSNUToxin-antitoxinsystemYwqKfamilyantitoxinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01321PE=4SV=1	36.446750945000026	0.4619375763483977	1				NaN	NaN	0	NaN	5011	4102	9114
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9116	29.013	NaN	1214.4	30	0	171.13	0.035			+	740	AECLNWQL	8	46	488.73244896433835	975.4503449954767	2	488.73272705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AECLNWQL_	REV__ENST00000437151.1_1_6:87680512-87680560:+|nuORF	38.80614096846853	0.6637206697844082	1				NaN	NaN	0	NaN	5012	4102	9114
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9122	29.029	NaN	1523	30	0	112.97	0.215	+			50934	YGYGHESEL	9	49	527.7268717241506	1053.439190515101	2	527.7279663085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YGYGHESEL_	ENSG00000173933|ENST00000310092|RBM4;nc|ENSG00000239306|Q96PK6-5|RBM14	53.351449002276354	0.2690372970092375	1				NaN	NaN	0	NaN	5015	4105	9121
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9123	29.033	NaN	930.57	30	0	163.27	0.035			+	-1	VHPCRLGAP	9	50	503.765781729772	NaN	0	503.7654724121094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_VHPC(Carbamidomethyl (C))RLGAP_	REV__ENST00000467101.5_1_20:60776202-60776382:+|nuORF	26.79610172149135	0.34227917631780574	1				NaN	NaN	0	NaN	5016	4105	9121
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9129	29.049	NaN	3049.9	30	0	316.42	0.214	+			20016	KEILGTAQSV	10	65	523.2981763537488	1044.5817997742975	2	523.298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEILGTAQSV_	ENSG00000197958|ENST00000361436|RPL12;ENST00000460355.1_1_2:204055847-204055997:+|nuORF;nc|ENSG00000197958|P30050-2|RPL12	54.343338949951054	0.4172868656359992	1				NaN	NaN	0	NaN	5019	4108	9128
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9130	29.052	NaN	3890.8	30	0	338.31	0.106	+			49657	VYISEHEHF	9	62	580.772137024165	1159.5297211151299	2	580.7727661132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYISEHEHF_	ENSG00000104853|ENST00000337392|CLPTM1;nc|ENSG00000104853|O96005-3|CLPTM1;nc|ENSG00000104853|O96005-4|CLPTM1	96.19043198914106	0.047412499214244314	1				NaN	NaN	0	NaN	5020	4108	9128
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9131	29.054	NaN	1611	30	0	273.51	0.034	+			34078	RSPPPGMGL	9	52	456.2417644345112	910.4689759358224	2	456.2415771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RSPPPGMGL_	ENSG00000116560|ENST00000357214|SFPQ;nc|ENSG00000116560|P23246-2|SFPQ	39.252832667884924	0.4290233611298554	1				NaN	NaN	0	NaN	5021	4108	9128
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9138	29.072	NaN	1653.3	30	0	283.66	0.214	+			43913	TPAAATSSSPS	11	52	488.73244896433835	975.4503449954767	2	488.7566223144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TPAAATSSSPS_	AMMECR1|p.R298Lfs*5|1|0.81|ENSG00000101935|chrX:110198629-110198629|C/-|frameshift_variant;ENSG00000101935|ENST00000262844|AMMECR1;nc|ENSG00000101935|Q9Y4X0-2|AMMECR1;nc|ENSG00000101935|Q9Y4X0-3|AMMECR1	36.446750945000026	0.6065623449959539	1				NaN	NaN	0	NaN	5025	4111	9137
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9139	29.076	NaN	1904.4	30	0	602.53	0.106			+	42685	TCLMIEIL	8	45	496.76143822841976	991.5083235236395	2	496.7608642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_TC(Carbamidomethyl (C))LMIEIL_	REV__ENSG00000101972|ENST00000371145|STAG2;REV__nc|ENSG00000101972|Q8N3U4|STAG2;REV__STAG2|p.T1208Kfs*3|1|0.87|ENSG00000101972|chrX:124095400-124095400|C/-|frameshift_variant	42.47446043378293	0.6409579893742323	1				NaN	NaN	0	NaN	5026	4111	9137
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9140	29.078	NaN	809.85	30	0	142.3	0.106			+	-1	CCCDDEHD	8	30	384.77203174440535	NaN	0	384.77215576171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term),3 Carbamidomethyl (C)	_(Acetyl (Protein N-term))C(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))DDEHD_	REV__ENSG00000198854|ENST00000368775|C1orf68	3.6843469609004	1.7418937515398478	1				NaN	NaN	0	NaN	5027	4111	9137
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9141	29.08	NaN	1860.4	30	0	443.84	0.106	+			9786	ENSPIGHSVI	10	50	526.7718650026368	1051.5291770720735	2	526.7716064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ENSPIGHSVI_	ENSG00000156453|ENST00000287008|PCDH1;nc|ENSG00000156453|Q08174|PCDH1	37.81151784470057	0.569310847604193	1				NaN	NaN	0	NaN	5028	4111	9137
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9142	29.081	NaN	1160.2	30	0	155.75	0.106				-1	HHRMKTPF	8	47	535.2700058129396	1068.5254586926792	2	535.2706909179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_HHRM(Oxidation (M))KTPF_	ENSG00000127423|ENST00000374298|AUNIP;nc|ENSG00000127423|Q9H7T9-2|AUNIP	31.954861631926434	0.7126016770032289	1				NaN	NaN	0	NaN	5029	4111	9137
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9143	29.083	NaN	1255.8	30	0	168.66	0.036			+	32396	QVDKMIKVL	9	49	537.321166302036	1072.6277796708719	2	537.3208618164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QVDKMIKVL_	REV__ENSG00000163946|ENST00000683822|TASOR;REV__ENST00000459993.5_1_3:56657067-56667992:-|nuORF;REV__nc|ENSG00000163946|Q9UK61-2|TASOR;REV__nc|ENSG00000163946|Q9UK61-3|TASOR;REV__nc|ENSG00000163946|Q9UK61-4|TASOR	37.81151784470057	0.4459294069877048	1				NaN	NaN	0	NaN	5030	4111	9137
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9150	29.101	NaN	1787.7	30	0	365.98	0.214			+	27177	MDLLSQELGP	10	56	551.7742877340473	1101.5340225348946	2	551.775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MDLLSQELGP_	REV__ENSG00000134285|ENST00000550765|FKBP11;REV__ENST00000546671.5_1_12:49317517-49318461:-|nuORF;REV__ENST00000551694.5_1_12:49318004-49319277:-|nuORF;REV__nc|ENSG00000134285|Q9NYL4-2|FKBP11	49.536043120802724	0.461275219792494	1				NaN	NaN	0	NaN	5034	4114	9149
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9151	29.105	NaN	1943.5	30	0	166.1	0.106			+	49301	VVQQWTLKL	9	64	557.8323158883069	1113.6500788434137	2	557.8330688476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVQQWTLKL_	REV__ENSG00000149474|ENST00000688188|KAT14;REV__nc|ENSG00000149474|Q9H8E8|KAT14	44.116797842482775	0.37197099687881774	1				NaN	NaN	0	NaN	5035	4114	9149
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9152	29.107	NaN	2030	30	0	401.24	0.035			+	16088	HDEFCKSY	8	55	514.7109382780877	1027.4073236229754	2	514.711181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HDEFCKSY_	REV__ENSG00000186788|ENST00000445385|SPATA31D3;REV__ENSG00000189357|ENST00000419782|SPATA31D4	60.29395666154354	0.49887135096048313	1				NaN	NaN	0	NaN	5036	4114	9149
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9162	29.13	NaN	3096.8	30	0	487.07	0.215	+			14783	GTLASSFAR	9	45	455.24275720603964	908.4709614788793	2	455.2428283691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTLASSFAR_	ENST00000563117.5_1_16:20817227-20817782:-|nuORF;ENST00000565884.5_1_16:20817227-20817407:-|nuORF	93.1432384553994	0.056003526918089595	1				NaN	NaN	0	NaN	5043	4117	9161
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9163	29.134	NaN	2962.1	30	0	491.45	0.106				-1	 	0	46	422.7135633450017	843.4125737568035	2	422.7137756347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	5044	4117	9161
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9164	29.136	NaN	2271.6	30	0	338.08	0.106			+	23782	LCLLNKCEDV	10	56	575.2851045415634	1148.5556561499268	2	575.285888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LCLLNKCEDV_	REV__ZNF486|p.K133_L134insNLLC|1|0.04|ENSG00000256229|chr19:20197109-20197110|-/AATCTTTTATGC|inframe_insertion	77.31757898189308	0.2175361111083648	1				NaN	NaN	0	NaN	5045	4117	9161
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9165	29.137	NaN	3329.3	30	0	467.06	0.106	+			36907	SIIETLRQK	9	67	544.3268186999377	1086.6390844666753	2	544.3271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SIIETLRQK_	ENSG00000080824|ENST00000216281|HSP90AA1;ENST00000436135.1_1_1:158495283-158495625:+|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1	124.08010499294276	0.018729767491916592	1				NaN	NaN	0	NaN	5046	4117	9161
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9166	29.139	NaN	1866.4	30	0	296.52	0.106	+			11814	FSTCGSHLAL	10	50	518.2481622713129	NaN	0	518.2484741210938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FSTCGSHLAL_	nc|ENSG00000220721|Q8NHA8|OR1F12P	68.78682469695295	0.16252363814257367	1				NaN	NaN	0	NaN	5047	4117	9161
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9167	29.141	NaN	1517.3	30	0	167.9	0.106			+	50609	YDVGKTIQEF	10	51	600.299521440498	1198.5844899477959	2	600.2993774414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YDVGKTIQEF_	REV__ENSG00000055332|ENST00000233057|EIF2AK2;REV__nc|ENSG00000055332|P19525-2|EIF2AK2	35.15202426646627	0.5927656479315102	1				NaN	NaN	0	NaN	5048	4117	9161
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9168	29.143	NaN	1000.7	30	0	162.42	0.038	+			50862	YEVYKQEQE	9	52	608.2815061276448	NaN	0	608.2822875976562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YEVYKQEQE_	ENSG00000059769|ENST00000313525|DNAJC25;ENST00000463589.5_1_9:114405367-114415499:+|nuORF;nc|ENSG00000059769|Q9H1X3-2|DNAJC25	20.94693142431847	0.3660861156085067	1				NaN	NaN	0	NaN	5049	4117	9161
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9177	29.164	NaN	5043.2	30	0	1291.7	0.214	+			48215	VTATQLIQK	9	70	501.3029635100605	1000.5913740869211	2	501.302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTATQLIQK_	ENSG00000198589|ENST00000651943|LRBA;LRBA|p.L2590*|1|0.41|ENSG00000198589|chr4:150310342-150310342|A/-|frameshift_variant;LRBA|p.T2011Qfs*11|1|0.19|ENSG00000198589|chr4:150599022-150599022|T/-|frameshift_variant;nc|ENSG00000198589|P50851-2|LRBA;nc|ENSG00000198589|P50851|LRBA	132.757866228626	0.013877640931359021	1				NaN	NaN	0	NaN	5055	4120	9176
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9178	29.168	NaN	3425.7	30	0	666	0.106			+	17312	IAEREGPSP	9	53	478.2454922432735	954.476431553347	2	478.24603271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IAEREGPSP_	REV__ENST00000542568.1_1_12:121017123-121017228:-|nuORF	42.86426827375447	0.38666266728046506	1				NaN	NaN	0	NaN	5056	4120	9176
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9179	29.17	NaN	3764.8	30	0	1241.1	0.106			+	-1	MKEKKREM	8	65	548.2876087520426	1094.5606645708851	2	548.2870483398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_MKEKKREM(Oxidation (M))_	REV__ENST00000451650.1_1_3:46184698-46185163:-|nuORF	64.20726635412375	0.4601301477144759	1				NaN	NaN	0	NaN	5057	4120	9176
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9180	29.172	NaN	2070.1	30	0	604.01	0.106	+			25586	LQGWGLSL	8	50	437.2430426493672	NaN	0	437.24346923828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LQGWGLSL_	ENST00000258991.7_1_17:62225146-62225452:-|nuORF	55.50420428727701	1.7418937515398478	1				NaN	NaN	0	NaN	5058	4120	9176
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9181	29.173	NaN	5068.2	30	0	689.05	0.036	+			7105	CYLSCVQVF	9	68	531.2431850936399	1060.4718172540797	2	531.2437133789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_CYLSCVQVF_	L1PA5_dup2765|chr4:69723015-69726028:+|1.903650506224423|0.171219590839865|3.47|472.0|87|1|anti-sense	60.97194046774394	0.20551255781574032	1				NaN	NaN	0	NaN	5059	4120	9176
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9192	29.197	NaN	9104.7	30	0	1364.2	0.214	+			3821	ATAIGMPVEK	10	78	508.77567919951355	1015.5368054658271	2	508.7757568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATAIGMPVEK_	ENSG00000109736|ENST00000355443|MFSD10;ENST00000509676.1_1_4:2934766-2935650:-|nuORF;MFSD10|p.S111Gfs*48|1|0.44|ENSG00000109736|chr4:2933125-2933147|GGGCGCCTCCCCAAGCAGTCAGA/-|frameshift_variant	89.02883481214508	0.13663399911061233	1				NaN	NaN	0	NaN	5067	4123	9191
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9193	29.201	NaN	1506.4	30	0	142.17	0.106	+			695	AEALTQRL	8	46	451.25856199398055	900.5025710547611	2	451.2583312988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEALTQRL_	ENSG00000105357|ENST00000642316|MYH14;MYH14|p.L1950Sfs*14|1|0.34|ENSG00000105357|chr19:50309646-50309646|C/-|frameshift_variant;MYH14|p.R1457Q|1|0.72|ENSG00000105357|chr19:50281796-50281796|G/A|missense_variant;nc|ENSG00000105357|Q7Z406-5|MYH14;nc|ENSG00000105357|Q7Z406-6|MYH14;nc|ENSG00000105357|Q7Z406|MYH14	67.49366992349736	0.4277823096851425	1				NaN	NaN	0	NaN	5068	4123	9191
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9194	29.203	NaN	1358.3	30	0	409.29	0.106				-1	LLRCLDWCV	9	37	589.2976163748605	1176.5806798165208	2	589.2978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LLRCLDWC(Carbamidomethyl (C))V_	ENST00000303991.4_1_5:176023307-176023586:-|nuORF	12.959181472943097	0.6112419832031292	1				NaN	NaN	0	NaN	5069	4123	9191
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9195	29.204	NaN	1036.9	30	0	324.71	0.037			+	37743	SLTREGLAKI	10	39	363.2210633822021	NaN	0	363.22119140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLTREGLAKI_	REV__ARHGEF40|p.H1487Tfs*15|3|0.37|ENSG00000165801|chr14:21088033-21088033|C/-|frameshift_variant;REV__ENSG00000165801|ENST00000298694|ARHGEF40;REV__ENST00000554514.1_1_14:21549058-21555515:+|nuORF;REV__nc|ENSG00000165801|Q8TER5-2|ARHGEF40;REV__nc|ENSG00000165801|Q8TER5-3|ARHGEF40;REV__nc|ENSG00000165801|Q8TER5-4|ARHGEF40	20.94693142431847	0.4201028297492154	1				NaN	NaN	0	NaN	5070	4123	9191
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9202	29.222	NaN	1228.9	30	0	125.99	0.214	+			45058	TVHGVTQAF	9	44	480.25082627434534	958.4870996154907	2	480.2510070800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVHGVTQAF_	ENSG00000006015|ENST00000358607|REX1BD;ENST00000597371.1_1_19:18699887-18702987:+|nuORF;ENST00000598375.5_1_19:18699887-18701110:+|nuORF;ENST00000600997.5_1_19:18699887-18701744:+|nuORF;nc|ENSG00000006015|Q96EN9-2|REX1BD;nc|ENSG00000006015|Q96EN9-3|REX1BD	56.72105179125745	0.24094814563026265	1				NaN	NaN	0	NaN	5074	4126	9201
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9203	29.226	NaN	1141.9	30	0	230.94	0.035	+			11263	FINYIEAY	8	51	516.7562329385368	1031.4979129438734	2	516.75537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FINYIEAY_	ENSG00000136634|ENST00000423557|IL10	42.47446043378293	0.6409579893742323	1				NaN	NaN	0	NaN	5075	4126	9201
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9208	29.24	NaN	2465.1	30	0	354.02	0.214			+	9578	ELIQTESAI	9	59	502.2687309900186	1002.5229090468372	2	502.2687072753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ELIQTESAI_	REV__ENSG00000182670|ENST00000418766|TTC3;REV__ENST00000399586.2_1_X:74960734-74966719:-|nuORF;REV__ENST00000472398.5_1_21:38529111-38558109:+|nuORF;REV__nc|ENSG00000182670|P53804-2|TTC3;REV__nc|ENSG00000182670|P53804-3|TTC3;REV__TTC3|p.E1565Rfs*14|1|0.21|ENSG00000182670|chr21:37182840-37182841|-/A|frameshift_variant	52.936696900407355	0.27249468807391813	1				NaN	NaN	0	NaN	5077	4129	9207
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9209	29.244	NaN	2969.1	30	0	230.77	0.106	+			1619	AGMALGIQK	9	62	444.75180446291324	887.4890559926265	2	444.7520751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AGMALGIQK_	ENSG00000174851|ENST00000376901|YIF1A	153.88471797397582	0.005963663451343155	1				NaN	NaN	0	NaN	5078	4129	9207
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9210	29.246	NaN	1890.7	30	0	256.24	0.106	+			16994	HPSLQPEEY	9	43	550.2560533679109	1098.4975538026217	2	550.2568969726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HPSLQPEEY_	ENSG00000135506|ENST00000315970|OS9;ENST00000549307.5_1_12:58089922-58109758:+|nuORF;ENST00000552787.5_1_12:58089581-58109758:+|nuORF;nc|ENSG00000135506|Q13438-2|OS9;nc|ENSG00000135506|Q13438-3|OS9;nc|ENSG00000135506|Q13438-4|OS9;nc|ENSG00000135506|Q13438-5|OS9;nc|ENSG00000135506|Q13438-6|OS9;nc|ENSG00000135506|Q13438-7|OS9;nc|ENSG00000135506|Q13438-8|OS9	77.31757898189308	0.1091473830098891	1				NaN	NaN	0	NaN	5079	4129	9207
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9211	29.248	NaN	1332.1	30	0	403.51	0.106	+			36899	SIHIYSDI	8	48	474.24336321518246	NaN	0	474.2430114746094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SIHIYSDI_	ENST00000491277.1_1_1:214705434-214705560:-|nuORF	50.0245360154114	1.7418937515398478	1				NaN	NaN	0	NaN	5080	4129	9207
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9212	29.25	NaN	2611.6	30	0	939.18	0.106			+	34468	RVAEQPVM	8	41	465.2480579231113	928.4815629130226	2	465.24700927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RVAEQPVM_	REV__ENST00000524376.1_1_11:121962418-121971135:-|nuORF;REV__ENST00000528986.1_1_11:121962442-121971135:-|nuORF	17.364965105453717	0.7956685240855921	1				NaN	NaN	0	NaN	5081	4129	9207
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9213	29.251	NaN	649.98	30	0	184.6	0.106			+	26305	LSVKLFNR	8	36	326.2027893066406	NaN	0	326.2027893066406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSVKLFNR_	REV__ENST00000524204.1_1_5:170834629-170834680:+|nuORF	12.959181472943097	1.7418937515398478	1				NaN	NaN	0	NaN	5082	4129	9207
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9214	29.253	NaN	1634.9	30	0	339.25	0.035	+			1440	AEYSSMVRP	9	37	520.2476924613143	1038.4808319894285	2	520.7515869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AEYSSMVRP_	ENSG00000149418|ENST00000278742|ST14	16.473147378115264	0.6112419832031293	1				NaN	NaN	0	NaN	5083	4129	9207
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9223	29.273	NaN	2562.4	30	0	356.18	0.214	+			15605	GVIVHIIEK	9	65	504.316072464062	1006.617591994924	2	504.31622314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVIVHIIEK_	ENSG00000277791|ENST00000619426|PSMB3	74.25504064058377	0.12238981753128622	1				NaN	NaN	0	NaN	5089	4132	9222
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9224	29.277	NaN	882.73	30	0	167.14	0.106				-1	 	0	30	324.6893044599216	647.3640559866432	2	324.6893615722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	5090	4132	9222
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9225	29.279	NaN	1424	30	0	210.89	0.106			+	14008	GSEWNESEL	9	59	525.7226288636896	NaN	0	525.7224731445312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GSEWNESEL_	REV__ENST00000434027.2_1_5:98105142-98106079:+|nuORF	49.44154591367651	0.21054156626303966	1				NaN	NaN	0	NaN	5091	4132	9222
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9226	29.281	NaN	1306.9	30	0	162.7	0.036	+			49619	VYHHLVETL	9	47	555.8008750687922	1109.5871972043842	2	555.8016967773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VYHHLVETL_	ENSG00000099998|ENST00000327365|GGT5;nc|ENSG00000099998|P36269-2|GGT5;nc|ENSG00000099998|P36269-3|GGT5	57.81127852772723	0.2318599694398087	1				NaN	NaN	0	NaN	5092	4132	9222
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9232	29.297	NaN	3030	30	0	335.95	0.215	+			42775	TEAETIQKL	9	62	516.7821382398096	1031.549723546419	2	516.7822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEAETIQKL_	ENSG00000138768|ENST00000514213|USO1;nc|ENSG00000138768|O60763-2|USO1;USO1|p.I920Sfs*9|1|0.08|ENSG00000138768|chr4:75812332-75812333|-/GAGCTTT|frameshift_variant;USO1|p.K251*|2|0.26|ENSG00000138768|chr4:75782746-75782747|-/T|frameshift_variant;USO1|p.K919Tfs*8|1|0.08|ENSG00000138768|chr4:75812331-75812332|-/C|frameshift_variant	95.81516180277367	0.04847050768394289	1				NaN	NaN	0	NaN	5095	4135	9231
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9233	29.3	NaN	2111.6	30	0	376.13	0.106			+	21329	KLTVSGQFK	9	41	336.53427396149993	NaN	0	336.5342102050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KLTVSGQFK_	REV__ZNF25|p.P7S|1|0.12|ENSG00000175395|chr10:37957543-37957543|G/A|missense_variant	23.04248740728303	0.3589936788096251	1				NaN	NaN	0	NaN	5096	4135	9231
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9234	29.302	NaN	1525.2	30	0	268.22	0.106			+	35927	SEGGTFRLV	9	45	483.25577601981166	964.4969991064233	2	483.2564392089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEGGTFRLV_	REV__ENST00000422843.7_1_5:156638304-156665140:+|nuORF;REV__ENST00000519759.1_1_5:156649807-156665140:+|nuORF	32.81241826257853	0.4965981579233955	1				NaN	NaN	0	NaN	5097	4135	9231
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9235	29.304	NaN	1419	30	0	278.26	0.037			+	17583	IECVQQGIEL	10	46	566.2877604714905	1130.560968009781	2	566.2891235351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IECVQQGIEL_	REV__ENST00000361951.4_1_1:173793856-173793928:+|nuORF	60.1669710687717	0.3643216362415131	1				NaN	NaN	0	NaN	5098	4135	9231
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9241	29.32	NaN	7821.4	30	0	1007.6	0.214	+			38578	SSFSGLLRK	9	63	497.7873900173004	993.5602271014009	2	497.78759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSFSGLLRK_	ENSG00000162783|ENST00000367577|IER5	107.00750918261382	0.032051501805654005	1				NaN	NaN	0	NaN	5101	4138	9240
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9242	29.324	NaN	1385.5	30	0	448.4	0.106			+	38530	SSDIGAVVL	9	44	430.73974540191244	859.4649378706249	2	430.7397766113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSDIGAVVL_	REV__KMT2D|p.D1343G|1|0.4|ENSG00000167548|chr12:49048762-49048762|T/C|missense_variant	55.50420428727701	0.2510918378945873	1				NaN	NaN	0	NaN	5102	4138	9240
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9243	29.326	NaN	1074.3	30	0	89.463	0.034				-1	WLAGLACF	8	50	469.23456150309727	936.4545700729946	2	469.23455810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_WLAGLAC(Carbamidomethyl (C))F_	ENST00000346693.8_1_X:149935700-149935835:-|nuORF	33.49298260027079	0.7007254697536482	1				NaN	NaN	0	NaN	5103	4138	9240
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9250	29.344	NaN	2776.6	30	0	329.92	0.213	+			50814	YERSNEYQL	9	66	601.2779115149891	1200.5412700967781	2	601.27734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YERSNEYQL_	ENSG00000087460|ENST00000371085|GNAS;ENST00000313949.11_1_20:57415898-57485881:+|nuORF;ENST00000371075.7_3_20:57415898-57485881:+|nuORF;ENST00000476196.5_1_20:57478538-57485881:+|nuORF;ENST00000477931.5_1_20:57464155-57485881:+|nuORF;ENST00000480975.5_1_20:57464272-57485881:+|nuORF;ENST00000487981.5_1_20:57478601-57484479:+|nuORF;ENST00000494081.5_1_20:57478601-57480533:+|nuORF;ENST00000496934.5_1_20:57473969-57485881:+|nuORF;nc|ENSG00000087460|P63092-2|GNAS;nc|ENSG00000087460|P63092-3|GNAS;nc|ENSG00000087460|P63092-4|GNAS;nc|ENSG00000087460|Q5JWF2-2|GNAS;nc|ENSG00000087460|Q5JWF2|GNAS	46.45678178249821	0.34452392205506005	1				NaN	NaN	0	NaN	5107	4141	9249
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9251	29.347	NaN	1691.1	30	0	552.82	0.032			+	539	ADCSHPAL	8	46	407.18214115789806	812.3497293825961	2	407.1817626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ADCSHPAL_	REV__MROH2B|p.T942A|1|0.2|ENSG00000171495|chr5:41017910-41017910|T/C|missense_variant	29.841539824830324	0.7289191502596711	1				NaN	NaN	0	NaN	5108	4141	9249
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9259	29.367	NaN	2457.3	30	0	456.92	0.214			+	32850	RCSDELKKN	9	60	546.7781278825616	1091.5417028319232	2	546.2737426757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RCSDELKKN_	REV__DLEC1|p.N951Mfs*67|1|0.31|ENSG00000008226|chr3:38100410-38100410|A/-|frameshift_variant;REV__DLEC1|p.V476Rfs*58|1|0.38|ENSG00000008226|chr3:38085431-38085432|-/C|frameshift_variant;REV__DLEC1|p.Y1310Mfs*121|1|0.59|ENSG00000008226|chr3:38116521-38116521|T/-|frameshift_variant;REV__ENSG00000008226|ENST00000308059|DLEC1;REV__ENST00000440294.6_1_3:38080716-38136583:+|nuORF;REV__nc|ENSG00000008226|Q9Y238-2|DLEC1;REV__nc|ENSG00000008226|Q9Y238-3|DLEC1	37.81151784470057	0.4459294069877048	1				NaN	NaN	0	NaN	5113	4144	9258
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9260	29.371	NaN	2084.8	30	0	289.55	0.034	+			20245	KELVTQQL	8	56	479.78178344206316	957.5490139509263	2	479.78131103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KELVTQQL_	ENSG00000189171|ENST00000476133|S100A13	95.81516180277367	0.2598660847282228	1				NaN	NaN	0	NaN	5114	4144	9258
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9270	29.393	NaN	6813.3	30	0	443.72	0.214			+	-1	VYGLDFHYM	9	79	580.7569145708591	1159.499276208518	2	581.2584838867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_VYGLDFHYM(Oxidation (M))_	REV__ENSG00000104946|ENST00000221543|TBC1D17;REV__ENST00000596243.5_1_19:50382536-50391878:+|nuORF;REV__nc|ENSG00000104946|Q9HA65-2|TBC1D17;REV__nc|ENSG00000104946|Q9HA65-3|TBC1D17	42.47446043378293	0.39123495718708534	1				NaN	NaN	0	NaN	5121	4147	9269
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9271	29.396	NaN	6322.7	30	0	808.29	0.106	+			17991	IHSKQSIYKE	10	74	616.8353405430539	1231.6561281529077	2	616.8357543945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IHSKQSIYKE_	EFCAB8|p.E1079Rfs*8|1|0.13|ENSG00000215529|chr20:32959919-32959920|-/G|frameshift_variant;EFCAB8|p.T943Hfs*12|1|0.12|ENSG00000215529|chr20:32943665-32943666|-/C|frameshift_variant;ENSG00000215529|ENST00000400522|EFCAB8	33.921630207806714	0.6028135429846169	1				NaN	NaN	0	NaN	5122	4147	9269
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9272	29.398	NaN	3174.1	30	0	310.08	0.106	+			29283	NYIHGSSQAQF	11	71	626.2911382517264	1250.5677235702526	2	626.290283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NYIHGSSQAQF_	ENSG00000102158|ENST00000618282|MAGT1	60.1669710687717	0.32196467475348695	1				NaN	NaN	0	NaN	5123	4147	9269
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9273	29.4	NaN	1597.6	30	0	300.15	0.106	+			28482	NGKGGSVPASV	11	49	486.7588745586791	971.5031961841582	2	486.7594299316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NGKGGSVPASV_	ENST00000550043.1_1_14:28733783-28734191:+|nuORF	28.081489160057373	0.6952392775027776	1				NaN	NaN	0	NaN	5124	4147	9269
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9274	29.402	NaN	991.41	30	0	231.26	0.106			+	38359	SRPPGVPAM	9	39	456.2417644345112	910.4689759358224	2	456.240966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SRPPGVPAM_	REV__ENSG00000197555|ENST00000381232|SIPA1L1;REV__nc|ENSG00000197555|O43166-3|SIPA1L1;REV__nc|ENSG00000197555|O43166|SIPA1L1;REV__SIPA1L1|p.K776*|1|0.32|ENSG00000197555|chr14:71671184-71671185|-/C|frameshift_variant;REV__SIPA1L1|p.N727Kfs*21|1|0.7|ENSG00000197555|chr14:71661386-71661387|-/A|frameshift_variant	29.14955571784316	0.5308295550522326	1				NaN	NaN	0	NaN	5125	4147	9269
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9275	29.404	NaN	1049.9	30	0	103.41	0.106	+			848	AEGPVVEKI	9	52	471.2686509050719	940.5227488769439	2	471.2682800292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEGPVVEKI_	CHD7|p.D2988Mfs*3|5|0.36|ENSG00000171316|chr8:60865895-60865895|G/-|frameshift_variant;CHD7|p.G2228Lfs*52|1|0.03|ENSG00000171316|chr8:60853406-60853407|-/TTGCCTTC|frameshift_variant;CHD7|p.L1020*|1|0.09|ENSG00000171316|chr8:60822599-60822599|T/-|frameshift_variant;CHD7|p.N2588Ifs*4|1|0.14|ENSG00000171316|chr8:60861054-60861054|A/-|frameshift_variant;ENSG00000171316|ENST00000423902|CHD7;nc|ENSG00000171316|Q9P2D1-2|CHD7;nc|ENSG00000171316|Q9P2D1-3|CHD7	56.43379154798735	0.2433427591689151	1				NaN	NaN	0	NaN	5126	4147	9269
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9276	29.405	NaN	1375.3	30	0	254.36	0.035	+			14384	GTAIQVITNK	10	60	522.8060331273798	1043.5975133215595	2	523.30712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GTAIQVITNK_	ENSG00000114455|ENST00000467761|HHLA2;nc|ENSG00000114455|Q9UM44-2|HHLA2	68.84614121027924	0.2867470276772903	1				NaN	NaN	0	NaN	5127	4147	9269
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9284	29.425	NaN	7510.2	30	0	594.99	0.214	+			39725	STISIFHCK	9	69	546.7781278825616	1091.5417028319232	2	546.77880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_STISIFHC(Carbamidomethyl (C))K_	ENST00000554584.5_1_14:64375879-64407376:+|nuORF	110.11987700582712	0.028875675806141952	1				NaN	NaN	0	NaN	5132	4150	9283
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9285	29.429	NaN	5606.2	30	0	604.34	0.106	+			14842	GTLMWHQMK	9	67	566.2748229897014	1130.5350930462027	2	566.2756958007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTLMWHQMK_	ENST00000346169.6_1_3:184032401-184033585:+|nuORF;ENST00000352767.7_2_3:184032446-184033585:+|nuORF	93.19546047674547	0.05585629608842056	1				NaN	NaN	0	NaN	5133	4150	9283
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9286	29.431	NaN	7996	30	0	3484.9	0.106				-1	FDCPAKKGLG	10	51	364.85494817064	1091.54301511212	3	364.8548889160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_FDC(Carbamidomethyl (C))PAKKGLG_	ENST00000494125.1_1_7:150759074-150761528:+|nuORF	22.579656572578934	0.6954366826851017	1				NaN	NaN	0	NaN	5134	4150	9283
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9287	29.433	NaN	4301.1	30	0	2442.3	0.106	+			20971	KKENIVVYL	9	46	553.3342076335082	1104.6538623338163	2	553.3348999023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KKENIVVYL_	tr|U7T096|U7T096_FUSNUFimbrialassemblyproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00783PE=4SV=1	39.252832667884924	0.4290233611298554	1				NaN	NaN	0	NaN	5135	4150	9283
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9288	29.434	NaN	2212.5	30	0	564.22	0.106				-1	 	0	44	343.21706649991927	684.4195800666386	2	343.217041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	5136	4150	9283
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9289	29.436	NaN	2676.9	30	0	308.31	0.106			+	-1	LSCSNNFCVV	10	43	381.50349520048064	1141.488656201642	3	381.5035400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_LSC(Carbamidomethyl (C))SNNFCVV_	REV__ENST00000372981.1_1_X:99940947-99941127:-|nuORF	27.047317107675042	0.6589519614906109	1				NaN	NaN	0	NaN	5137	4150	9283
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9290	29.438	NaN	2197.2	30	0	222.72	0.035			+	23758	LCFHSITTL	9	66	517.7693716517674	NaN	0	517.7677001953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LCFHSITTL_	REV__ENSG00000142197|ENST00000691173|DOP1B;REV__nc|ENSG00000142197|Q9Y3R5-2|DOP1B	55.50420428727701	0.16876052142120426	1				NaN	NaN	0	NaN	5138	4150	9283
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9301	29.464	NaN	1722.3	30	0	155.26	0.214	+			20423	KETSYEEAL	9	62	535.2561464178016	1068.497739902403	2	535.2564697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KETSYEEAL_	ENSG00000125844|ENST00000377813|RRBP1;nc|ENSG00000125844|Q9P2E9-3|RRBP1;RRBP1|p.A628Gfs*69|1|0.35|ENSG00000125844|chr20:17621915-17621916|-/T|frameshift_variant;RRBP1|p.N91Mfs*2|1|0.04|ENSG00000125844|chr20:17660238-17660238|G/-|frameshift_variant	58.22992032128504	0.22837015374068087	1				NaN	NaN	0	NaN	5146	4153	9300
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9302	29.467	NaN	1536	30	0	170.83	0.106	+			47842	VSLDGKPV	8	49	407.7369884489517	NaN	0	407.737060546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSLDGKPV_	ENSG00000144369|ENST00000304698|FAM171B	55.50420428727701	1.7418937515398478	1				NaN	NaN	0	NaN	5147	4153	9300
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9303	29.469	NaN	1653.5	30	0	161.31	0.106	+			27639	MPQTLPFSPL	10	61	573.7945069840748	1145.5744610349495	2	573.7960205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))PQTLPFSPL_	WNK4|p.R467Afs*194|2|0.56|ENSG00000126562|chr17:42785399-42785399|G/-|frameshift_variant	69.6276240434122	0.2803623802747859	1				NaN	NaN	0	NaN	5148	4153	9300
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9304	29.471	NaN	1826.4	30	0	377.55	0.106			+	-1	CNKKAVPI	8	41	465.2659253340882	928.5172977349764	2	465.2633972167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_C(Carbamidomethyl (C))NKKAVPI_	REV__ENSG00000126814|ENST00000261249|TRMT5	21.70233525837049	0.7917639344264583	1				NaN	NaN	0	NaN	5149	4153	9300
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9305	29.473	NaN	766.28	30	0	139.21	0.106	+			26066	LSLRQGCGA	9	39	452.7390744334293	903.4635959336587	2	452.7388610839844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSLRQGCGA_	nc|ENSG00000095981|Q96T55|KCNK16	40.77816245573522	0.41113185337114944	1				NaN	NaN	0	NaN	5150	4153	9300
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9306	29.475	NaN	800.77	30	0	115.62	0.106				-1	EMLHNDASDH	10	30	592.7359619140625	NaN	0	592.7359619140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_EM(Oxidation (M))LHNDASDH_	ENSG00000141424|ENST00000269187|SLC39A6	10.265252068803164	0.42010282974921537	1				NaN	NaN	0	NaN	5151	4153	9300
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9307	29.477	NaN	1217.4	30	0	147.2	0.035	+			11627	FQAPTAKEM	9	49	511.7520434609702	1021.4895339887404	2	511.7525329589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FQAPTAKEM_	ENSG00000125637|ENST00000245796|PSD4;ENST00000409656.5_1_2:113943320-113958989:+|nuORF;ENST00000418251.6_1_2:113943320-113958989:+|nuORF;nc|ENSG00000125637|Q8NDX1-2|PSD4;PSD4|p.S882P|1|0.5|ENSG00000125637|chr2:113198759-113198759|T/C|missense_variant	36.446750945000026	0.4619375763483977	1				NaN	NaN	0	NaN	5152	4153	9300
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9318	29.502	NaN	2881.2	30	0	254.81	0.214	+			17697	IELNQQNKL	9	64	550.3086210484751	1098.60268916375	2	550.3095092773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IELNQQNKL_	ENSG00000134996|ENST00000346234|OSTF1;OSTF1|p.K191Rfs*11|1|0.32|ENSG00000134996|chr9:75140914-75140914|A/-|frameshift_variant	129.42129120953632	0.01549634589885217	1				NaN	NaN	0	NaN	5160	4156	9317
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9319	29.505	NaN	1869.1	30	0	213.59	0.106	+			28404	NERSGLSTQ	9	59	496.24541752936466	990.4762821255293	2	496.24591064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NERSGLSTQ_	PPARGC1A|p.C161R|1|0.32|ENSG00000109819|chr4:23829534-23829534|A/G|missense_variant	44.377184641726394	0.36891676396732553	1				NaN	NaN	0	NaN	5161	4156	9317
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9320	29.507	NaN	1086.5	30	0	125.51	0.034			+	28928	NRHGPPGVL	9	43	473.7639388334619	NaN	0	473.7632751464844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NRHGPPGVL_	REV__ENST00000254868.8_2_17:6978245-6978371:-|nuORF	30.503639358989545	0.3235605894931338	1				NaN	NaN	0	NaN	5162	4156	9317
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9328	29.527	NaN	8406.7	30	0	2094.7	0.214				-1	CRETCNCQS	9	70	579.2094276546761	1156.4043023761521	2	579.2102661132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_CRETC(Carbamidomethyl (C))NC(Carbamidomethyl (C))QS_	ENSG00000164283|ENST00000381405|ESM1	45.97224482568171	0.3502073465782774	1				NaN	NaN	0	NaN	5167	4159	9327
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9329	29.531	NaN	6539.6	30	0	1319.8	0.106	+			19192	IYTSSVNRL	9	54	526.7903436995813	1051.5661344659625	2	526.790771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IYTSSVNRL_	ENSG00000184432|ENST00000333188|COPB2;nc|ENSG00000184432|P35606-2|COPB2	104.0567914643314	0.03506238181059741	1				NaN	NaN	0	NaN	5168	4159	9327
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9330	29.533	NaN	2310.8	30	0	314.47	0.106	+			14625	GTGNLGFPK	9	54	445.73991283882833	889.4652727444567	2	445.7400207519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTGNLGFPK_	ENSG00000173193|ENST00000474629|PARP14;nc|ENSG00000173193|Q460N5-1|PARP14;nc|ENSG00000173193|Q460N5-3|PARP14;nc|ENSG00000173193|Q460N5-4|PARP14;nc|ENSG00000173193|Q460N5-5|PARP14;PARP14|p.N1416Efs*19|1|0.2|ENSG00000173193|chr3:122718388-122718389|-/A|frameshift_variant	47.657333605630114	0.33044192980041115	1				NaN	NaN	0	NaN	5169	4159	9327
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9331	29.534	NaN	1447.1	30	0	191.38	0.037	+			49576	VYENMKQTL	9	49	563.2839177073947	1124.5532824815893	2	563.28564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VYENMKQTL_	ENSG00000085491|ENST00000565488|SLC25A24;nc|ENSG00000085491|Q6NUK1-2|SLC25A24	54.776311868738084	0.25715957988447635	1				NaN	NaN	0	NaN	5170	4159	9327
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9339	29.554	NaN	4966.7	30	0	1122.6	0.214			+	25931	LSHCVMGMPW	10	78	580.7569145708591	1159.499276208518	2	580.7576904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSHCVMGMPW_	REV__ENST00000602140.1_1_19:8387163-8387238:+|nuORF	37.15910966729921	0.575322462179216	1				NaN	NaN	0	NaN	5175	4162	9338
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9340	29.558	NaN	3407.6	30	0	1171.7	0.106	+			49150	VVMFVAQVL	9	65	511.29228122725254	1020.5700095213051	2	511.2921447753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_VVM(Oxidation (M))FVAQVL_	ENSG00000105939|ENST00000242351|ZC3HAV1;nc|ENSG00000105939|Q7Z2W4-4|ZC3HAV1	52.29916861842294	0.2778091507991977	1				NaN	NaN	0	NaN	5176	4162	9338
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9341	29.56	NaN	1422.3	30	0	157.07	0.106				-1	 	0	52	493.7666450667887	985.5187372003775	2	493.7666931152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	5177	4162	9338
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9342	29.562	NaN	2094.5	30	0	317.96	0.106	+			26350	LTAGKALSV	9	49	430.2658632703036	858.5171736074072	2	430.2659912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LTAGKALSV_	ENST00000289805.9_1_16:89762860-89763136:-|nuORF	31.529811441608018	0.5085848003137583	1				NaN	NaN	0	NaN	5178	4162	9338
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9343	29.563	NaN	650.53	30	0	79.575	0.106			+	47610	VRVPSDPP	8	36	433.7397108925092	NaN	0	433.74017333984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VRVPSDPP_	REV__ENSG00000197256|ENST00000586659|KANK2;REV__ENST00000590400.1_1_19:11303345-11305238:-|nuORF;REV__KANK2|p.P430Rfs*5|1|0.23|ENSG00000197256|chr19:11178681-11178681|G/-|frameshift_variant;REV__nc|ENSG00000197256|Q63ZY3-2|KANK2;REV__nc|ENSG00000197256|Q63ZY3-3|KANK2	30.503639358989545	1.7418937515398478	1				NaN	NaN	0	NaN	5179	4162	9338
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9344	29.565	NaN	1266.4	30	0	134.74	0.106			+	29578	PFKEPWPSP	9	41	362.1856994628906	NaN	0	362.1856994628906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PFKEPWPSP_	REV__ENSG00000114127|ENST00000392981|XRN1;REV__ENST00000472697.5_1_3:142095319-142144369:-|nuORF;REV__nc|ENSG00000114127|Q8IZH2|XRN1;REV__XRN1|p.L671*|1|0.28|ENSG00000114127|chr3:142403765-142403765|A/-|frameshift_variant;REV__XRN1|p.L671Ffs*2|1|0.14|ENSG00000114127|chr3:142403764-142403765|-/AA|frameshift_variant;REV__XRN1|p.M1309Cfs*14|1|0.4|ENSG00000114127|chr3:142335462-142335462|T/-|frameshift_variant;REV__XRN1|p.R1611Gfs*34|5|0.22|ENSG00000114127|chr3:142311801-142311801|T/-|frameshift_variant	32.81241826257853	0.3119040447479903	1				NaN	NaN	0	NaN	5180	4162	9338
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9345	29.567	NaN	777.44	30	0	83.051	0.032			+	-1	CCCDDEHD	8	39	384.7719751524886	NaN	0	384.7718505859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term),3 Carbamidomethyl (C)	_(Acetyl (Protein N-term))C(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))DDEHD_	REV__ENSG00000198854|ENST00000368775|C1orf68	3.6843469609004	1.7418937515398478	1				NaN	NaN	0	NaN	5181	4162	9338
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9356	29.592	NaN	2190.4	30	0	202.04	0.214	+			25068	LLLIMSCAR	9	60	518.2875856398915	NaN	0	518.2876586914062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LLLIM(Oxidation (M))SCAR_	nc|ENSG00000142163|Q8WZA6|OR1E3	51.33545320467046	0.19748963086191895	1				NaN	NaN	0	NaN	5189	4165	9355
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9357	29.596	NaN	1300.4	30	0	138.59	0.106			+	33223	RFQTQFVVV	9	62	562.3155667414372	1122.6165805496744	2	562.3173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RFQTQFVVV_	REV__ENSG00000174502|ENST00000367135|SLC26A9;REV__nc|ENSG00000174502|Q7LBE3-2|SLC26A9;REV__SLC26A9|p.N501D|1|0.25|ENSG00000174502|chr1:205923609-205923609|T/C|missense_variant;REV__SLC26A9|p.T608Pfs*62|1|0.36|ENSG00000174502|chr1:205921800-205921800|G/-|frameshift_variant	27.882242232435846	0.5426732730940306	1				NaN	NaN	0	NaN	5190	4165	9355
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9358	29.598	NaN	2035.4	30	0	474.38	0.106			+	9041	EGFEVALKYKT	11	39	642.8428024904069	1283.6710520476138	2	642.8430786132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EGFEVALKYKT_	REV__ENSG00000121314|ENST00000240615|TAS2R8	17.468008924990375	0.788697330333842	1				NaN	NaN	0	NaN	5191	4165	9355
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9359	29.6	NaN	1848.5	30	0	302.45	0.106	+			35875	SEDSKRQIN	9	51	538.7692642395638	1075.5239755459274	2	538.7696533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SEDSKRQIN_	ENSG00000113318|ENST00000265081|MSH3;MSH3|p.N1020Ifs*40|1|0.46|ENSG00000113318|chr5:80864865-80864865|A/-|frameshift_variant;MSH3|p.N1020Kfs*17|1|0.43|ENSG00000113318|chr5:80864864-80864865|-/A|frameshift_variant;MSH3|p.N861Mfs*6|1|0.43|ENSG00000113318|chr5:80792766-80792766|A/-|frameshift_variant;MSH3|p.V745Ifs*28|1|0.05|ENSG00000113318|chr5:80768981-80768982|-/CATATTCGAAGTTTAT|frameshift_variant	40.77816245573522	0.41113185337114944	1				NaN	NaN	0	NaN	5192	4165	9355
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9360	29.601	NaN	811.15	30	0	78.873	0.106			+	14043	GSHPGAPGL	9	43	396.7034238080883	NaN	0	396.7037658691406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GSHPGAPGL_	REV__ENST00000485448.1_1_19:40872390-40872810:+|nuORF	33.51558372728122	0.30835390848773375	1				NaN	NaN	0	NaN	5193	4165	9355
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9361	29.603	NaN	931.6	30	0	81.065	0.106	+			13228	GIIASTALPQ	10	49	485.78191856404743	969.5492841948949	2	485.7816162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GIIASTALPQ_	ENSG00000164007|ENST00000296387|CLDN19;nc|ENSG00000164007|Q8N6F1-2|CLDN19;nc|ENSG00000164007|Q8N6F1-3|CLDN19	36.446750945000026	0.5818864909973037	1				NaN	NaN	0	NaN	5194	4165	9355
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9362	29.605	NaN	1364.9	30	0	198.77	0.036				-1	SGAAICLPSVK	11	47	551.8014556591676	1101.588358385135	2	551.8019409179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_SGAAIC(Carbamidomethyl (C))LPSVK_	ENSG00000141384|ENST00000269142|TAF4B;ENST00000504528.2_1_4:113747508-113747850:+|nuORF;nc|ENSG00000141384|Q92750-2|TAF4B	27.047317107675042	0.7060868989289394	1				NaN	NaN	0	NaN	5195	4165	9355
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9370	29.625	NaN	1966.7	30	0	655.6	0.214	+			14212	GSSGSFYLK	9	53	473.2371723669561	944.4597918007122	2	473.23773193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSSGSFYLK_	ENSG00000129422|ENST00000693296|MTUS1;ENST00000518975.1_1_8:17566427-17579410:-|nuORF;nc|ENSG00000129422|Q9ULD2-2|MTUS1;nc|ENSG00000129422|Q9ULD2-6|MTUS1	26.69291269510374	0.5537881896960711	1				NaN	NaN	0	NaN	5200	4168	9369
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9371	29.628	NaN	941.45	30	0	259.5	0.106				-1	 	0	37	416.227783730445	415.22050726384504	1	416.2278137207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	5201	4168	9369
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9372	29.63	NaN	691.65	30	0	144.6	0.035	+			11704	FRTGSEPAL	9	28	489.25600066303537	NaN	0	489.2562561035156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FRTGSEPAL_	ENSG00000137936|ENST00000260502|BCAR3;nc|ENSG00000137936|O75815-2|BCAR3;nc|ENSG00000137936|O75815-3|BCAR3	32.81241826257853	0.3119040447479903	1				NaN	NaN	0	NaN	5202	4168	9369
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9380	29.65	NaN	2491.2	30	0	391.44	0.214			+	14757	GTKHLEPLL	9	49	336.5341803220158	1006.5807115662474	3	336.534423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTKHLEPLL_	REV__ENSG00000167114|ENST00000300456|SLC27A4;REV__nc|ENSG00000167114|Q6P1M0-2|SLC27A4	24.20275056022122	0.577060078256802	1				NaN	NaN	0	NaN	5207	4171	9379
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9381	29.653	NaN	1055.1	30	0	126.76	0.106	+			8103	DYGLVSQAL	9	45	483.2526436186064	964.4907343040128	2	483.2520751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DYGLVSQAL_	ENSG00000120341|ENST00000308284|SEC16B;ENST00000327037.8_1_1:177899723-177917737:-|nuORF;ENST00000464428.2_1_1:177898995-177929556:-|nuORF;ENST00000466953.6_1_1:177898995-177928232:-|nuORF;nc|ENSG00000120341|Q96JE7-3|SEC16B;SEC16B|p.Y799Tfs*17|1|0.42|ENSG00000120341|chr1:177937322-177937322|A/-|frameshift_variant	37.81151784470057	0.4459294069877048	1				NaN	NaN	0	NaN	5208	4171	9379
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9382	29.655	NaN	1658.8	30	0	308.45	0.035	+			19176	IYTKGTPEI	9	53	511.283286393837	1020.552019854474	2	511.28106689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IYTKGTPEI_	ENSG00000156011|ENST00000327040|PSD3;nc|ENSG00000156011|Q9NYI0|PSD3;PSD3|p.D956Rfs*11|1|0.17|ENSG00000156011|chr8:18556274-18556275|-/G|frameshift_variant;PSD3|p.D956Tfs*14|1|0.29|ENSG00000156011|chr8:18556275-18556275|G/-|frameshift_variant;PSD3|p.F625Lfs*6|1|0.25|ENSG00000156011|chr8:18804557-18804557|A/-|frameshift_variant;PSD3|p.L776Wfs*44|1|0.35|ENSG00000156011|chr8:18632699-18632699|A/-|frameshift_variant;PSD3|p.V655Efs*3|1|0.1|ENSG00000156011|chr8:18801329-18801330|-/CT|frameshift_variant	65.46538089061403	0.16805504838372562	1				NaN	NaN	0	NaN	5209	4171	9379
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9387	29.67	NaN	2099.8	30	0	284.47	0.214	+			18477	ISFPATGCQK	10	55	554.7761387075107	1107.5377244818212	2	554.7767944335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_ISFPATGC(Carbamidomethyl (C))QK_	ENSG00000137154|ENST00000380394|RPS6	58.22992032128504	0.38193887838457763	1				NaN	NaN	0	NaN	5211	4174	9386
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9388	29.674	NaN	1936.4	30	0	320.89	0.106			+	37975	SPHPGPLP	8	42	401.21627559999035	800.4179982667807	2	401.2164306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SPHPGPLP_	REV__ENSG00000059915|ENST00000020673|PSD;REV__PSD|p.R334W|1|0.39|ENSG00000059915|chr10:102414987-102414987|G/A|missense_variant	28.2542754592877	0.7411748056684583	1				NaN	NaN	0	NaN	5212	4174	9386
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9389	29.676	NaN	2153	30	0	389.33	0.106			+	44219	TRMRVPQAA	9	58	515.2841417183332	1028.5537305034663	2	515.2861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TRMRVPQAA_	REV__ENSG00000143409|ENST00000683666|MINDY1;REV__nc|ENSG00000143409|Q8N5J2-2|MINDY1;REV__nc|ENSG00000143409|Q8N5J2-3|MINDY1;REV__nc|ENSG00000143409|Q8N5J2-4|MINDY1	40.77816245573522	0.41113185337114944	1				NaN	NaN	0	NaN	5213	4174	9386
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9390	29.677	NaN	1565.2	30	0	255.14	0.106	+			13910	GRLDLATQSL	10	53	537.3013033281751	NaN	0	537.3013305664062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GRLDLATQSL_	ENSG00000169683|ENST00000306688|LRRC45;ENST00000583383.5_1_17:79981501-79983267:+|nuORF	28.081489160057373	0.40797012399963245	1				NaN	NaN	0	NaN	5214	4174	9386
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9391	29.679	NaN	1923.3	30	0	197.51	0.039			+	-1	QTPSWMERLV	10	49	631.8142700195312	NaN	0	631.8142700195312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_QTPSWM(Oxidation (M))ERLV_	REV__ENST00000541683.1_1_11:61582434-61582803:-|nuORF;REV__ENST00000545245.5_2_11:61580788-61582536:-|nuORF	25.57405402267927	0.4162033004763879	1				NaN	NaN	0	NaN	5215	4174	9386
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9399	29.699	NaN	2121.4	30	0	163.37	0.214	+			39128	SSVFLAIKK	9	61	496.810419823788	991.606286714376	2	496.81036376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSVFLAIKK_	ENST00000274030.10_1_4:120160492-120160642:+|nuORF	82.24051045832904	0.08786059719216216	1				NaN	NaN	0	NaN	5220	4177	9398
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9400	29.703	NaN	1977	30	0	248.33	0.035			+	7012	CRSVNQFR	8	63	505.2515563964844	NaN	0	505.2515563964844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_CRSVNQFR_	REV__ENST00000473373.1_1_20:34214440-34214716:-|nuORF	54.776311868738084	1.7418937515398478	1				NaN	NaN	0	NaN	5221	4177	9398
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9406	29.719	NaN	1889	30	0	134.55	0.214	+			16077	HCLVDPEALQ	10	66	562.7737523657775	1123.5329517983548	2	562.7758178710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HCLVDPEALQ_	ENST00000299882.9_1_11:113576954-113577077:-|nuORF	40.77816245573522	0.5419747034533848	1				NaN	NaN	0	NaN	5224	4180	9405
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9407	29.722	NaN	1485.2	30	0	204.42	0.106	+			50840	YETQVKVM	8	59	499.25457852478206	996.4946041163641	2	499.25457763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YETQVKVM_	ENSG00000120948|ENST00000240185|TARDBP;nc|ENSG00000120948|Q13148-4|TARDBP	79.71258880314673	0.32596852995588826	1				NaN	NaN	0	NaN	5225	4180	9405
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9408	29.724	NaN	856.33	30	0	82.774	0.106	+			27752	MQRPPPRPS	9	41	533.2830200195312	NaN	0	533.2830200195312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MQRPPPRPS_	ENSG00000256463|ENST00000537592|SALL3;nc|ENSG00000256463|Q9BXA9-2|SALL3;nc|ENSG00000256463|Q9BXA9-3|SALL3;nc|ENSG00000256463|Q9BXA9-4|SALL3	25.57405402267927	0.3484490411150625	1				NaN	NaN	0	NaN	5226	4180	9405
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9409	29.726	NaN	1962.7	30	0	699.95	0.106			+	46145	VDQQTKKI	8	41	480.27931637554684	958.5440798178937	2	480.2788391113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VDQQTKKI_	REV__SH3BGRL|p.K19T|1|0.55|ENSG00000131171|chrX:81276994-81276994|A/C|missense_variant	27.882242232435846	0.7440473649773525	1				NaN	NaN	0	NaN	5227	4180	9405
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9410	29.728	NaN	1290.3	30	0	98.198	0.037	+			50949	YICTECGKVF	10	57	581.765970131507	NaN	0	581.7677612304688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YICTECGKVF_	ENSG00000147124|ENST00000684689|ZNF41;nc|ENSG00000147124|P51814-2|ZNF41;nc|ENSG00000147124|P51814-3|ZNF41;nc|ENSG00000147124|P51814-4|ZNF41;nc|ENSG00000147124|P51814-5|ZNF41;nc|ENSG00000147124|P51814-7|ZNF41;nc|ENSG00000147124|P51814-8|ZNF41;nc|ENSG00000147124|P51814|ZNF41	27.882242232435846	0.4086243523356342	1				NaN	NaN	0	NaN	5228	4180	9405
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9416	29.744	NaN	1423.4	30	0	235.62	0.143			+	-1	VSLWCQTI	8	57	503.75602180307	1005.49749067294	2	503.75616455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_VSLWC(Carbamidomethyl (C))QTI_	REV__ENSG00000112659|ENST00000252050|CUL9;REV__ENST00000515773.5_1_6:43164260-43192180:+|nuORF;REV__nc|ENSG00000112659|Q8IWT3-3|CUL9	44.116797842482775	0.6307669463330267	1				NaN	NaN	0	NaN	5231	4183	9415
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9420	29.76	NaN	1884.9	30	0	315.25	0.144	+			3330	ASMEEVFHR	9	59	553.2579032656878	1104.5012535981755	2	553.2583618164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASMEEVFHR_	ENSG00000126217|ENST00000535094|MCF2L;nc|ENSG00000126217|O15068-10|MCF2L;nc|ENSG00000126217|O15068-2|MCF2L;nc|ENSG00000126217|O15068-3|MCF2L;nc|ENSG00000126217|O15068-4|MCF2L;nc|ENSG00000126217|O15068-5|MCF2L;nc|ENSG00000126217|O15068-6|MCF2L;nc|ENSG00000126217|O15068-8|MCF2L;nc|ENSG00000126217|O15068|MCF2L	58.2462437865262	0.22823408064396822	1				NaN	NaN	0	NaN	5232	4186	9419
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9429	29.783	NaN	1631.2	30	0	224.32	0.214	+			12597	GEHLKTDLL	9	54	513.2849613189069	1024.5553697046137	2	513.2850341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEHLKTDLL_	ENSG00000100345|ENST00000216181|MYH9;MYH9|p.I784*|1|0.07|ENSG00000100345|chr22:36304036-36304036|G/-|frameshift_variant;nc|ENSG00000100345|P35579-2|MYH9	58.22992032128504	0.22837015374068087	1				NaN	NaN	0	NaN	5238	4189	9428
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9430	29.787	NaN	1798.7	30	0	537.96	0.033	+			15728	GVSAAFAVK	9	41	425.2450296850012	848.4755064368024	2	425.2450866699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GVSAAFAVK_	BZW1|p.L189P|1|0.05|ENSG00000082153|chr2:200818001-200818001|T/C|missense_variant;BZW1|p.N285Tfs*11|2|0.26|ENSG00000082153|chr2:200818782-200818782|A/-|frameshift_variant;BZW1|p.N286*|1|0.04|ENSG00000082153|chr2:200818790-200818791|-/T|frameshift_variant;BZW1|p.S325Rfs*19|1|0.04|ENSG00000082153|chr2:200819989-200819990|-/ACAATATAGAA|frameshift_variant;ENSG00000082153|ENST00000409600|BZW1;nc|ENSG00000082153|Q7L1Q6-2|BZW1;nc|ENSG00000082153|Q7L1Q6-3|BZW1;nc|ENSG00000082153|Q7L1Q6-4|BZW1	47.657333605630114	0.33044192980041115	1				NaN	NaN	0	NaN	5239	4189	9428
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9436	29.803	NaN	2194.9	30	0	184.2	0.143	+			35872	SEDSHLESL	9	61	508.7310054313486	1015.4474579294972	2	508.7307434082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEDSHLESL_	ENSG00000047849|ENST00000683076|MAP4;MAP4|p.R919Gfs*14|1|0.44|ENSG00000047849|chr3:47870917-47870917|G/-|frameshift_variant;MAP4|p.T960Qfs*35|1|0.3|ENSG00000047849|chr3:47869309-47869309|T/-|frameshift_variant;MAP4|p.V999*|1|0.25|ENSG00000047849|chr3:47867318-47867318|T/-|frameshift_variant;nc|ENSG00000047849|P27816-6|MAP4;nc|ENSG00000047849|P27816|MAP4	64.20726635412375	0.17854274437659667	1				NaN	NaN	0	NaN	5242	4192	9435
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9442	29.821	NaN	3504.4	30	0	439.17	0.214			+	27895	MTQIARLP	8	56	465.2659253340882	928.5172977349764	2	465.2671203613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MTQIARLP_	REV__ENSG00000145147|ENST00000504154|SLIT2;REV__nc|ENSG00000145147|O94813-2|SLIT2;REV__nc|ENSG00000145147|O94813-3|SLIT2	52.29916861842294	0.578018602984656	1				NaN	NaN	0	NaN	5245	4195	9441
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9443	29.825	NaN	1000.7	30	0	184.2	0.106			+	11664	FQPPSNVTL	9	41	501.76483154296875	NaN	0	501.76483154296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FQPPSNVTL_	REV__ENSG00000085552|ENST00000368094|IGSF9;REV__ENST00000476102.1_1_1:159900586-159913268:-|nuORF;REV__IGSF9|p.D822Ifs*33|2|0.32|ENSG00000085552|chr1:159928924-159928924|C/-|frameshift_variant;REV__IGSF9|p.P351Hfs*30|1|0.34|ENSG00000085552|chr1:159934242-159934242|G/-|frameshift_variant;REV__IGSF9|p.P909Lfs*19|1|0.52|ENSG00000085552|chr1:159928662-159928662|G/-|frameshift_variant;REV__IGSF9|p.V341*|1|0.31|ENSG00000085552|chr1:159934273-159934273|C/-|frameshift_variant;REV__IGSF9|p.V639Yfs*114|1|0.36|ENSG00000085552|chr1:159930338-159930338|C/-|frameshift_variant;REV__nc|ENSG00000085552|Q9P2J2-2|IGSF9	30.317721548370564	0.32449924987115025	1				NaN	NaN	0	NaN	5246	4195	9441
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9444	29.827	NaN	1613.4	30	0	143.04	0.037			+	16711	HLCSEKEMPS	10	55	580.7560216345231	NaN	0	580.7567138671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HLCSEKEMPS_	REV__ENST00000250489.8_1_14:20929623-20929770:-|nuORF	37.81151784470057	0.3760215235790741	1				NaN	NaN	0	NaN	5247	4195	9441
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9454	29.85	NaN	1572.8	30	0	304.61	0.214	+			15034	GTNPFATVK	9	47	467.75327259973255	933.4919922662651	2	467.752685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTNPFATVK_	ENSG00000128298|ENST00000381669|BAIAP2L2;nc|ENSG00000128298|Q6UXY1-2|BAIAP2L2	47.657333605630114	0.33044192980041115	1				NaN	NaN	0	NaN	5254	4198	9453
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9455	29.854	NaN	1859.4	30	0	329.04	0.106	+			19947	KEFQEASAL	9	53	511.76189272609065	1021.5092325189813	2	511.76214599609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEFQEASAL_	ENSG00000178623|ENST00000407714|GPR35;nc|ENSG00000178623|Q9HC97-2|GPR35	65.46538089061403	0.16805504838372562	1				NaN	NaN	0	NaN	5255	4198	9453
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9456	29.856	NaN	1669.1	30	0	249.14	0.034			+	29400	PARSYGGVAV	10	47	488.7647393129466	975.5149256926932	2	488.762939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PARSYGGVAV_	REV__ENST00000489739.1_1_9:139685858-139686514:+|nuORF	24.519189625965996	0.6795976720565101	1				NaN	NaN	0	NaN	5256	4198	9453
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9463	29.872	NaN	3689	30	0	456.87	0.214	+			30694	QDAKMAGIGI	10	66	502.2657206212435	1002.516888309287	2	502.26605224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QDAKMAGIGI_	CON__P19012	67.49366992349736	0.29779660154124327	1				NaN	NaN	0	NaN	5260	4201	9462
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9464	29.876	NaN	2093	30	0	384.32	0.106	+			19193	IYTSSVNRL	9	57	526.7903436995813	1051.5661344659625	2	526.791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IYTSSVNRL_	ENSG00000184432|ENST00000333188|COPB2;nc|ENSG00000184432|P35606-2|COPB2	45.97224482568171	0.3502073465782774	1				NaN	NaN	0	NaN	5261	4201	9462
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9465	29.878	NaN	1999	30	0	164.59	0.106			+	46454	VESLLTLAH	9	59	491.78187873159237	981.5492045299848	2	491.7818908691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VESLLTLAH_	REV__ENSG00000083097|ENST00000349129|DOP1A	51.33545320467046	0.2872990594074956	1				NaN	NaN	0	NaN	5262	4201	9462
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9466	29.88	NaN	2149.7	30	0	349.01	0.106	+			16033	HAVDVDSGSVY	11	61	574.7656255318313	NaN	0	574.7647705078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HAVDVDSGSVY_	ENSG00000071054|ENST00000324219|MAP4K4;MAP4K4|p.G1177Efs*5|1|0.19|ENSG00000071054|chr2:101888826-101888826|G/-|frameshift_variant;nc|ENSG00000071054|O95819-2|MAP4K4;nc|ENSG00000071054|O95819-3|MAP4K4;nc|ENSG00000071054|O95819-4|MAP4K4;nc|ENSG00000071054|O95819-5|MAP4K4;nc|ENSG00000071054|O95819-6|MAP4K4;nc|ENSG00000071054|O95819|MAP4K4	45.97224482568171	0.34424757290527136	1				NaN	NaN	0	NaN	5263	4201	9462
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9467	29.881	NaN	1302.6	30	0	263.09	0.106			+	48601	VTQVEKYY	8	54	515.2662991579813	1028.5180453827625	2	515.30078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTQVEKYY_	REV__ENSG00000112159|ENST00000369393|MDN1;REV__MDN1|p.L4077Cfs*15|1|0.16|ENSG00000112159|chr6:89680625-89680625|G/-|frameshift_variant;REV__MDN1|p.L5278Ffs*6|1|0.18|ENSG00000112159|chr6:89652273-89652274|-/A|frameshift_variant	47.91560031466742	0.6071945918984287	1				NaN	NaN	0	NaN	5264	4201	9462
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9468	29.883	NaN	1429.7	30	0	131.67	0.106	+			48932	VVEEGSKNIR	10	51	565.8132319626395	NaN	0	565.8134155273438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VVEEGSKNIR_	ENSG00000110435|ENST00000227868|PDHX;nc|ENSG00000110435|O00330-3|PDHX	24.519189625965996	0.41966695327750003	1				NaN	NaN	0	NaN	5265	4201	9462
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9469	29.885	NaN	1186.7	30	0	196.42	0.037			+	-1	DFPETCKVC	9	50	578.2446941891269	NaN	0	578.2450561523438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C)	_DFPETC(Carbamidomethyl (C))KVC(Carbamidomethyl (C))_	REV__ENSG00000215421|ENST00000299687|ZNF407;REV__nc|ENSG00000215421|Q9C0G0-2|ZNF407;REV__nc|ENSG00000215421|Q9C0G0-3|ZNF407;REV__ZNF407|p.G1946Afs*18|1|0.26|ENSG00000215421|chr18:75063553-75063553|G/-|frameshift_variant	21.9598887501803	0.3626577482100488	1				NaN	NaN	0	NaN	5266	4201	9462
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9478	29.907	NaN	3897.1	30	0	515.22	0.214	+			19672	KDMVTQASL	9	53	496.7592148601716	991.5038767871432	2	496.7577209472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KDMVTQASL_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	79.48907831485694	0.09975780661107167	1				NaN	NaN	0	NaN	5272	4204	9477
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9479	29.91	NaN	5417.8	30	0	2097.5	0.106			+	51350	YSTSDVQFK	9	71	537.7586805503031	1073.502808167406	2	537.7592163085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YSTSDVQFK_	REV__tr|U7T561|U7T561_FUSNUN-acetylmuramoyl-L-alanineamidaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00450PE=4SV=1	79.71258880314673	0.09879134589249085	1				NaN	NaN	0	NaN	5273	4204	9477
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9480	29.912	NaN	3890.3	30	0	703.08	0.106	+			14579	GTFSTVTSTVK	11	67	564.2998636303631	1126.5851743275261	2	564.3008422851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTFSTVTSTVK_	ENSG00000182934|ENST00000332118|SRPRA;nc|ENSG00000182934|P08240-2|SRPRA	94.4091291819064	0.0807249280027251	1				NaN	NaN	0	NaN	5274	4204	9477
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9481	29.914	NaN	2424.1	30	0	318.62	0.106			+	38349	SRLPQVEVGQL	11	56	613.3484459097806	1224.682338886361	2	613.3487548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SRLPQVEVGQL_	REV__ENSG00000135454|ENST00000341156|B4GALNT1;REV__ENST00000553142.5_1_12:58021700-58025915:-|nuORF;REV__nc|ENSG00000135454|Q00973-2|B4GALNT1;REV__nc|ENSG00000135454|Q00973-3|B4GALNT1	31.068146907933308	0.6639116734509778	1				NaN	NaN	0	NaN	5275	4204	9477
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9482	29.916	NaN	1661.9	30	0	188.38	0.106	+			27506	MMRMMTKIN	9	53	594.2756961471923	1186.5368393611845	2	594.2754516601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Oxidation (M)	_MMRM(Oxidation (M))M(Oxidation (M))TKIN_	ENST00000369577.7_1_6:87965292-87965355:+|nuORF	53.351449002276354	0.2690372970092375	1				NaN	NaN	0	NaN	5276	4204	9477
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9483	29.918	NaN	1206.5	30	0	136.14	0.034	+			4683	ATLSICSPK	9	43	460.24961744393556	918.4846819546711	2	460.2491149902344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATLSICSPK_	ENSG00000121060|ENST00000316881|TRIM25;ENST00000572021.5_1_17:54969063-54989474:-|nuORF;TRIM25|p.G621D|1|0.15|ENSG00000121060|chr17:56891731-56891731|C/T|missense_variant	54.722347961057174	0.257609425301511	1				NaN	NaN	0	NaN	5277	4204	9477
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9488	29.932	NaN	2089.7	30	0	352.77	0.214	+			48297	VTEGSFVYK	9	65	515.2662991579813	1028.5180453827625	2	515.2660522460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTEGSFVYK_	ENSG00000057608|ENST00000380191|GDI2;GDI2|p.S222Afs*20|1|0.1|ENSG00000057608|chr10:5785197-5785197|T/-|frameshift_variant	71.87747018426188	0.13267044672804276	1				NaN	NaN	0	NaN	5279	4207	9487
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9489	29.936	NaN	1824.1	30	0	343.93	0.106	+			16967	HPQPTQVQF	9	55	541.2744334027453	1080.5343138722906	2	541.2749633789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HPQPTQVQF_	ENSG00000172534|ENST00000310441|HCFC1;HCFC1|p.P1894Lfs*22|1|0.06|ENSG00000172534|chrX:153950835-153950835|G/-|frameshift_variant;nc|ENSG00000172534|P51610-2|HCFC1;nc|ENSG00000172534|P51610-4|HCFC1	54.776311868738084	0.25715957988447635	1				NaN	NaN	0	NaN	5280	4207	9487
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9490	29.938	NaN	2295.6	30	0	263.09	0.106			+	-1	VASLLVCTRM	10	55	575.3110206296311	1148.6074883260621	2	575.311279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_VASLLVC(Carbamidomethyl (C))TRM_	REV__ENSG00000186075|ENST00000348931|ZPBP2;REV__nc|ENSG00000186075|Q6X784-2|ZPBP2;REV__ZPBP2|p.R246Gfs*27|1|0.24|ENSG00000186075|chr17:39875275-39875275|T/-|frameshift_variant;REV__ZPBP2|p.T125Qfs*32|1|0.39|ENSG00000186075|chr17:39871587-39871587|A/-|frameshift_variant	32.75053402867276	0.6123771875927935	1				NaN	NaN	0	NaN	5281	4207	9487
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9491	29.939	NaN	1862.4	30	0	175.66	0.106	+			29332	NYSSAVQKF	9	64	522.2607089098306	1042.506864886461	2	522.76318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NYSSAVQKF_	ENSG00000079482|ENST00000355520|OPHN1;nc|ENSG00000079482|O60890-2|OPHN1;OPHN1|p.V742Sfs*43|1|0.37|ENSG00000079482|chrX:68053746-68053747|-/G|frameshift_variant	52.936696900407355	0.27249468807391813	1				NaN	NaN	0	NaN	5282	4207	9487
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9492	29.941	NaN	1299.8	30	0	266.02	0.036	+			13086	GFSGLDVAHLC	11	51	559.7667236328125	NaN	0	559.7667236328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GFSGLDVAHLC_	ENSG00000182263|ENST00000333129|FIGN	26.69291269510374	0.4464570093767436	1				NaN	NaN	0	NaN	5283	4207	9487
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9502	29.963	NaN	1455.5	30	0	210.35	0.215	+			28797	NPHNDIQAF	9	47	528.2488598000548	1054.4831666669095	2	528.2495727539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NPHNDIQAF_	CHD4|p.L1404Ffs*9|1|0.42|ENSG00000111642|chr12:6582872-6582873|-/A|frameshift_variant;CHD4|p.N1569Ifs*9|1|0.44|ENSG00000111642|chr12:6581364-6581364|T/-|frameshift_variant;CHD5|p.P1887Rfs*14|1|0.5|ENSG00000116254|chr1:6106698-6106698|G/-|frameshift_variant;ENSG00000111642|ENST00000544040|CHD4;ENSG00000116254|ENST00000262450|CHD5;ENSG00000170004|ENST00000330494|CHD3;nc|ENSG00000111642|Q14839-2|CHD4;nc|ENSG00000170004|Q12873-2|CHD3;nc|ENSG00000170004|Q12873-3|CHD3	42.396135135203025	0.392153681582562	1				NaN	NaN	0	NaN	5290	4210	9501
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9503	29.967	NaN	2002.4	30	0	248.4	0.106	+			45527	TYIDKSTQL	9	60	534.7825255326687	1067.5504981321374	2	534.7830200195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TYIDKSTQL_	ENSG00000119965|ENST00000481909|C10orf88	54.722347961057174	0.257609425301511	1				NaN	NaN	0	NaN	5291	4210	9501
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9504	29.969	NaN	1767.9	30	0	171.27	0.035	+			47694	VSEKTLQTP	9	63	501.7769319448544	NaN	0	502.26568603515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSEKTLQTP_	ENSG00000095203|ENST00000374566|EPB41L4B;EPB41L4B|p.K588N|1|0.32|ENSG00000095203|chr9:109208038-109208038|C/A|missense_variant	47.95952297671804	0.22075498469600283	1				NaN	NaN	0	NaN	5292	4210	9501
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9510	29.985	NaN	4712.8	30	0	811.43	0.214	+			40733	SVCVLDLRK	9	66	545.3068892599401	1088.5992255866802	2	545.307861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SVC(Carbamidomethyl (C))VLDLRK_	ENSG00000101849|ENST00000645353|TBL1X;ENSG00000177565|ENST00000457928|TBL1XR1;nc|ENSG00000101849|O60907-2|TBL1X;TBL1X|p.G568S|1|0.45|ENSG00000101849|chrX:9714998-9714998|G/A|missense_variant	104.0567914643314	0.03506238181059741	1				NaN	NaN	0	NaN	5295	4213	9509
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9511	29.988	NaN	2029.9	30	0	323.39	0.035			+	14406	GTAPLVILSH	10	44	336.534180214156	1006.580711242668	3	336.5338439941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTAPLVILSH_	REV__ENST00000444374.1_1_9:92316696-92316852:+|nuORF	20.94693142431847	0.7087701759873708	1				NaN	NaN	0	NaN	5296	4213	9509
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9516	30.003	NaN	3227	30	0	468.08	0.214	+			41177	SVKVWNVAE	9	70	516.2796069163059	1030.5446608994116	2	516.2797241210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVKVWNVAE_	ENSG00000114767|ENST00000232888|RRP9	34.172542307311794	0.4838870758800184	1				NaN	NaN	0	NaN	5298	4216	9515
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9517	30.007	NaN	2463.3	30	0	178.67	0.106				-1	KVQMVQLQ	8	61	495.2758626337981	988.5371723343962	2	495.7761535644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_KVQM(Oxidation (M))VQLQ_	ENSG00000229474|ENST00000682850|PATL2	38.80614096846853	0.6637206697844082	1				NaN	NaN	0	NaN	5299	4216	9515
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9518	30.009	NaN	3286.8	30	0	1692.4	0.106	+			48798	VVAAVIWRK	9	42	347.8901547193166	1040.64863475815	3	347.8903503417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVAAVIWRK_	ENSG00000204592|ENST00000376630|HLA-E	34.172542307311794	0.4838870758800184	1				NaN	NaN	0	NaN	5300	4216	9515
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9519	30.01	NaN	1458.5	30	0	142.66	0.036	+			42717	TDFQTHTSL	9	51	525.248539999054	1048.4825270649078	2	525.2499389648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TDFQTHTSL_	ENSG00000144589|ENST00000456909|STK11IP;ENST00000475396.5_1_2:220462865-220474366:+|nuORF;STK11IP|p.E522Rfs*80|1|0.11|ENSG00000144589|chr2:219608354-219608354|G/-|frameshift_variant;STK11IP|p.L552Cfs*50|1|0.22|ENSG00000144589|chr2:219608596-219608596|C/-|frameshift_variant	72.87924865735499	0.12833875048249987	1				NaN	NaN	0	NaN	5301	4216	9515
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9526	30.028	NaN	12881	30	0	3546.4	0.214			+	37977	SPHPPGPL	8	60	401.21627559999035	800.4179982667807	2	401.2162170410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SPHPPGPL_	REV__ENST00000310771.8_1_7:99950889-99951396:+|nuORF;REV__ENST00000336576.9_2_2:220149801-220149909:+|nuORF	54.76467175910256	0.5536104764165384	1				NaN	NaN	0	NaN	5305	4219	9525
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9527	30.032	NaN	8655.3	30	0	1674.3	0.106	+			3790	ATAGFTIGR	9	75	447.24550420385714	892.4764554745143	2	447.2454833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATAGFTIGR_	ENSG00000184634|ENST00000374080|MED12;MED12|p.E1337Kfs*8|1|0.26|ENSG00000184634|chrX:71130173-71130173|G/-|frameshift_variant;nc|ENSG00000184634|Q93074-2|MED12;nc|ENSG00000184634|Q93074-3|MED12	148.98678547993487	0.0071052929883181565	1				NaN	NaN	0	NaN	5306	4219	9525
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9528	30.034	NaN	4404.9	30	0	436.97	0.106	+			10813	FANDANKVL	9	69	496.2637034071084	NaN	0	496.26385498046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FANDANKVL_	ENSG00000123104|ENST00000381340|ITPR2;ITPR2|p.D636Afs*14|1|0.07|ENSG00000123104|chr12:26658110-26658111|-/AATGG|frameshift_variant;ITPR2|p.F471Lfs*2|1|0.21|ENSG00000123104|chr12:26666048-26666048|A/-|frameshift_variant;ITPR2|p.K1802Sfs*13|2|0.65|ENSG00000123104|chr12:26487217-26487217|T/-|frameshift_variant;ITPR2|p.L1313Ffs*10|1|0.43|ENSG00000123104|chr12:26599208-26599209|-/A|frameshift_variant;ITPR2|p.L479Ffs*33|1|0.04|ENSG00000123104|chr12:26666026-26666027|-/GGAACAAA|frameshift_variant;ITPR2|p.N1390Mfs*17|1|0.07|ENSG00000123104|chr12:26596973-26596973|C/-|frameshift_variant;ITPR2|p.N858Kfs*2|1|0.38|ENSG00000123104|chr12:26655723-26655724|-/T|frameshift_variant;ITPR2|p.R1837Gfs*7|1|0.09|ENSG00000123104|chr12:26487113-26487113|T/-|frameshift_variant;ITPR2|p.R1837Kfs*4|1|0.24|ENSG00000123104|chr12:26487112-26487113|-/T|frameshift_variant	72.87924865735499	0.09578366712754152	1				NaN	NaN	0	NaN	5307	4219	9525
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9529	30.036	NaN	1778.2	30	0	110.23	0.106	+			48799	VVAAVIWRK	9	62	521.3319385994273	1040.6493242656545	2	521.3321533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVAAVIWRK_	ENSG00000204592|ENST00000376630|HLA-E	82.24051045832904	0.08786059719216216	1				NaN	NaN	0	NaN	5308	4219	9525
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9530	30.038	NaN	2130.1	30	0	186.42	0.106			+	9614	ELNHYSLE	8	57	502.73804060193197	1003.461528270664	2	503.2390441894531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ELNHYSLE_	REV__ENSG00000141449|ENST00000424526|GREB1L;REV__ENSG00000196208|ENST00000381486|GREB1;REV__GREB1|p.E1623K|1|0.39|ENSG00000196208|chr2:11632939-11632939|G/A|missense_variant;REV__nc|ENSG00000141449|Q9C091-3|GREB1L;REV__nc|ENSG00000196208|Q4ZG55-4|GREB1	25.57405402267927	0.7618694492699909	1				NaN	NaN	0	NaN	5309	4219	9525
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9531	30.039	NaN	1885.5	30	0	354.89	0.106			+	-1	PVCPRVMAK	9	45	508.7741351001929	1015.5337172671858	2	509.2762145996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_PVCPRVM(Oxidation (M))AK_	REV__ENST00000469300.6_1_2:128396858-128397856:-|nuORF	30.503639358989545	0.5181749237905803	1				NaN	NaN	0	NaN	5310	4219	9525
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9532	30.041	NaN	1630.4	30	0	534.58	0.036				-1	GAAVAMFGCLV	11	54	548.2701416015625	NaN	0	548.2701416015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_GAAVAMFGC(Carbamidomethyl (C))LV_	ENST00000531485.5_1_11:86013469-86048450:+|nuORF;ENST00000532270.5_1_11:86013469-86014401:+|nuORF	31.954861631926434	0.423006731851301	1				NaN	NaN	0	NaN	5311	4219	9525
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9543	30.066	NaN	4546.4	30	0	474.53	0.214	+			44622	TTEQALKI	8	55	452.2607144673031	902.5068760014062	2	452.2606201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTEQALKI_	nc|ENSG00000170927|P08F94-2|PKHD1	99.37495909608758	0.2510236104623939	1				NaN	NaN	0	NaN	5319	4222	9542
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9544	30.07	NaN	3374.8	30	0	573.83	0.106	+			1026	AEKLGGSAVI	10	56	472.7741403016154	943.5337276700308	2	472.77392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEKLGGSAVI_	ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65622809-65623088:-|nuORF	80.45461616416974	0.1919067876629769	1				NaN	NaN	0	NaN	5320	4222	9542
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9545	30.072	NaN	2504	30	0	1598.6	0.106			+	48026	VSRKEVEL	8	37	480.27931637554684	958.5440798178937	2	480.2789306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSRKEVEL_	REV__ENSG00000141027|ENST00000268712|NCOR1;REV__ENST00000470782.5_1_17:15935612-15971511:-|nuORF	26.69291269510374	0.7532304684939817	1				NaN	NaN	0	NaN	5321	4222	9542
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9546	30.074	NaN	3104.5	30	0	381.29	0.106	+			2635	AQINSVFNK	9	72	510.7773112146581	1019.5400694961162	2	510.777099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AQINSVFNK_	ENSG00000117597|ENST00000491415|UTP25	78.26377905018397	0.10505600812668463	1				NaN	NaN	0	NaN	5322	4222	9542
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9547	30.076	NaN	2639.3	30	0	321.23	0.106	+			19097	IYKCVNTTL	9	62	556.294238111018	1110.5739232888359	2	556.2950439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_IYKC(Carbamidomethyl (C))VNTTL_	ENSG00000131236|ENST00000372805|CAP1;ENST00000461993.1_1_1:40535258-40537202:+|nuORF;nc|ENSG00000131236|Q01518-2|CAP1	80.45461616416974	0.09558281504443908	1				NaN	NaN	0	NaN	5323	4222	9542
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9548	30.077	NaN	1584.4	30	0	205.8	0.106			+	-1	CCVSQCCQPRY	11	46	723.2768184121124	NaN	0	723.2760009765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term),2 Carbamidomethyl (C)	_(Acetyl (Protein N-term))C(Carbamidomethyl (C))C(Carbamidomethyl (C))VSQCCQPRY_	REV__KRTAP4-6|p.C46Y|1|0.29|ENSG00000198090|chr17:41140351-41140351|C/T|missense_variant	14.137123925751023	0.456735970842152	1				NaN	NaN	0	NaN	5324	4222	9542
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9549	30.079	NaN	1095.8	30	0	358.63	0.033	+			39217	STAGLIIGK	9	43	430.26606404164085	858.5175751500817	2	430.2664489746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STAGLIIGK_	ENSG00000104967|ENST00000263257|NOVA2;ENSG00000139910|ENST00000539517|NOVA1;nc|ENSG00000139910|P51513-5|NOVA1	47.657333605630114	0.33044192980041115	1				NaN	NaN	0	NaN	5325	4222	9542
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9554	30.094	NaN	6957.9	30	0	1029.6	0.143	+			14496	GTCLLIANK	9	56	495.2758626337981	988.5371723343962	2	495.27569580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GTC(Carbamidomethyl (C))LLIANK_	CARM1|p.I452Sfs*12|1|0.18|ENSG00000142453|chr19:10920679-10920683|TTGTG/-|frameshift_variant;ENSG00000142453|ENST00000327064|CARM1;nc|ENSG00000142453|Q86X55-1|CARM1	122.1759843771914	0.019882474861609503	1				NaN	NaN	0	NaN	5327	4225	9553
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9562	30.114	NaN	1810.5	30	0	179.41	0.213				-1	FMCQACRPGF	10	57	608.7576179272319	1215.5006829212637	2	608.7565307617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_FMC(Carbamidomethyl (C))QACRPGF_	ENSG00000044524|ENST00000336596|EPHA3;EPHA3|p.E647Rfs*9|1|0.35|ENSG00000044524|chr3:89419248-89419248|A/-|frameshift_variant;EPHA3|p.I361Kfs*12|1|0.11|ENSG00000044524|chr3:89341865-89341866|-/AAGAT|frameshift_variant;EPHA3|p.M847Wfs*10|4|0.2|ENSG00000044524|chr3:89450213-89450213|C/-|frameshift_variant;nc|ENSG00000044524|P29320-2|EPHA3	29.14955571784316	0.6417842315402807	1				NaN	NaN	0	NaN	5332	4228	9561
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9563	30.118	NaN	1970.6	30	0	273.62	0.106			+	9251	EGVLMIILY	9	61	525.8009883183746	1049.5874237035491	2	525.80126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EGVLMIILY_	REV__ENSG00000024048|ENST00000372901|UBR2;REV__nc|ENSG00000024048|Q8IWV8-3|UBR2;REV__nc|ENSG00000024048|Q8IWV8|UBR2;REV__UBR2|p.N1139Tfs*65|1|0.07|ENSG00000024048|chr6:42659824-42659824|A/-|frameshift_variant	50.0245360154114	0.3026755932229825	1				NaN	NaN	0	NaN	5333	4228	9561
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9564	30.119	NaN	1071.6	30	0	103.28	0.106			+	-1	LGTSCDVGR	9	52	482.7308654785156	NaN	0	482.7308654785156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LGTSC(Carbamidomethyl (C))DVGR_	REV__ENSG00000140859|ENST00000445690|KIFC3;REV__nc|ENSG00000140859|Q9BVG8-5|KIFC3;REV__nc|ENSG00000140859|Q9BVG8-6|KIFC3;REV__nc|ENSG00000140859|Q9BVG8|KIFC3	49.44154591367651	0.21054156626303966	1				NaN	NaN	0	NaN	5334	4228	9561
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9565	30.121	NaN	1242.5	30	0	164.47	0.106			+	37289	SLASFALAPP	10	41	487.2693786621094	NaN	0	487.2693786621094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLASFALAPP_	REV__CMYA5|p.I3735Hfs*2|1|0.08|ENSG00000164309|chr5:79758842-79758843|-/T|frameshift_variant;REV__CMYA5|p.K1823Rfs*17|2|0.34|ENSG00000164309|chr5:79734227-79734227|A/-|frameshift_variant;REV__CMYA5|p.N2399Ifs*16|1|0.46|ENSG00000164309|chr5:79735957-79735957|A/-|frameshift_variant;REV__CMYA5|p.P4051Nfs*8|1|0.05|ENSG00000164309|chr5:79799555-79799561|AACCTGG/-|frameshift_variant;REV__CMYA5|p.S3683Pfs*17|1|0.14|ENSG00000164309|chr5:79752728-79752728|T/-|frameshift_variant;REV__ENSG00000164309|ENST00000446378|CMYA5	29.14955571784316	0.4044631218331212	1				NaN	NaN	0	NaN	5335	4228	9561
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9566	30.123	NaN	1267.2	30	0	170.42	0.106				-1	MDAQVKVWF	9	44	570.2801754426456	NaN	0	570.2796020507812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_M(Oxidation (M))DAQVKVWF_	HLX|p.T316M|1|0.46|ENSG00000136630|chr1:220882338-220882338|C/T|missense_variant	26.69291269510374	0.34280015626154364	1				NaN	NaN	0	NaN	5336	4228	9561
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9567	30.125	NaN	2293.7	30	0	224.24	0.035			+	45347	TVSQLLSSLG	10	64	502.7846053530155	1003.554657772831	2	502.7853698730469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TVSQLLSSLG_	REV__ENSG00000163125|ENST00000369068|RPRD2;REV__ENST00000492220.1_1_1:150381497-150445807:+|nuORF;REV__nc|ENSG00000163125|Q5VT52-2|RPRD2;REV__nc|ENSG00000163125|Q5VT52-3|RPRD2;REV__nc|ENSG00000163125|Q5VT52-5|RPRD2;REV__RPRD2|p.G1389Efs*24|1|0.39|ENSG00000163125|chr1:150473110-150473110|G/-|frameshift_variant;REV__RPRD2|p.L1399Wfs*14|2|0.26|ENSG00000163125|chr1:150473136-150473136|C/-|frameshift_variant;REV__RPRD2|p.P1275Lfs*138|1|0.15|ENSG00000163125|chr1:150472768-150472768|C/-|frameshift_variant;REV__RPRD2|p.P733Hfs*4|1|0.43|ENSG00000163125|chr1:150471145-150471146|CC/-|frameshift_variant;REV__RPRD2|p.P772Lfs*42|2|0.19|ENSG00000163125|chr1:150471259-150471259|C/-|frameshift_variant;REV__RPRD2|p.T1353Pfs*60|1|0.13|ENSG00000163125|chr1:150473001-150473001|C/-|frameshift_variant	65.46538089061403	0.31613324008013116	1				NaN	NaN	0	NaN	5337	4228	9561
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9575	30.145	NaN	15011	30	0	3565.5	0.214	+			39957	STMGYMMAK	9	70	510.221627220381	1018.428701507562	2	510.2222595214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STMGYMMAK_	ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;ENST00000518337.1_1_8:74128289-74128592:-|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P	127.46168284122857	0.016682644177004526	1				NaN	NaN	0	NaN	5342	4231	9574
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9576	30.148	NaN	3194.7	30	0	1721.9	0.106			+	38667	SSIRAKLGQY	10	60	561.8162663320581	1121.6179797309162	2	561.8170166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSIRAKLGQY_	REV__ENSG00000058335|ENST00000558480|RASGRF1;REV__ENST00000560334.5_1_15:79271198-79356973:-|nuORF;REV__nc|ENSG00000058335|Q13972|RASGRF1	39.252832667884924	0.5560298534376815	1				NaN	NaN	0	NaN	5343	4231	9574
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9577	30.15	NaN	3615.2	30	0	519.66	0.106	+			8578	EAYPDHTQF	9	70	554.240626592446	1106.466700251692	2	554.2424926757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EAYPDHTQF_	ENSG00000151500|ENST00000341541|THYN1;ENST00000533975.1_1_11:134119036-134122923:-|nuORF;nc|ENSG00000151500|Q9P016-2|THYN1;THYN1|p.N194Ifs*15|2|0.22|ENSG00000151500|chr11:134248859-134248859|T/-|frameshift_variant	68.78682469695295	0.14603441672067394	1				NaN	NaN	0	NaN	5344	4231	9574
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9578	30.152	NaN	1586.6	30	0	237.4	0.106	+			9829	EPLAGDRPP	9	46	476.248286549072	NaN	0	476.24853515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EPLAGDRPP_	ENSG00000141837|ENST00000360228|CACNA1A;nc|ENSG00000141837|O00555-4|CACNA1A;nc|ENSG00000141837|O00555-6|CACNA1A	27.882242232435846	0.3367954786602879	1				NaN	NaN	0	NaN	5345	4231	9574
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9579	30.154	NaN	1292.8	30	0	255.57	0.036			+	-1	KKISMNLPLG	10	40	558.826474209431	NaN	0	558.8272094726562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_KKISM(Oxidation (M))NLPLG_	REV__ENSG00000121446|ENST00000294854|RGSL1;REV__nc|ENSG00000121446|A5PLK6-6|RGSL1;REV__RGSL1|p.C239G|1|0.28|ENSG00000121446|chr1:182473826-182473826|T/G|missense_variant	27.882242232435846	0.4086243523356342	1				NaN	NaN	0	NaN	5346	4231	9574
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9585	30.17	NaN	5778.1	30	0	1081.1	0.214	+			23309	KYQAVTATL	9	56	497.7819018632701	993.5492507933402	2	497.7818298339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KYQAVTATL_	ENSG00000142541|ENST00000391857|RPL13A;ENST00000425147.1_1_21:26734448-26734742:+|nuORF;ENST00000478813.1_1_8:81177882-81177960:-|nuORF;nc|ENSG00000293056|Q6NVV1|RPL13AP3	134.81075121484326	0.012914550297035062	1				NaN	NaN	0	NaN	5349	4234	9584
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9586	30.174	NaN	4317.9	30	0	598.04	0.106			+	-1	PAYMAGHLVCP	11	66	616.2845102143061	1230.5544674954122	2	616.2847290039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_PAYM(Oxidation (M))AGHLVC(Carbamidomethyl (C))P_	REV__ENSG00000184956|ENST00000421673|MUC6;REV__MUC6|p.E825Rfs*6|1|0.47|ENSG00000184956|chr11:1026400-1026401|-/G|frameshift_variant;REV__MUC6|p.E825Rfs*87|1|0.38|ENSG00000184956|chr11:1026401-1026401|G/-|frameshift_variant;REV__MUC6|p.N1717Tfs*10|1|0.03|ENSG00000184956|chr11:1017653-1017653|G/-|frameshift_variant;REV__MUC6|p.P1246Lfs*47|1|0.2|ENSG00000184956|chr11:1020161-1020161|G/-|frameshift_variant;REV__MUC6|p.Q524Sfs*57|1|0.11|ENSG00000184956|chr11:1028667-1028667|G/-|frameshift_variant	24.20275056022122	0.7359240821686345	1				NaN	NaN	0	NaN	5350	4234	9584
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9587	30.176	NaN	4453.8	30	0	449.47	0.106	+			12816	GENADSQIKL	10	68	537.7746781515573	1073.5348033699145	2	537.775146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GENADSQIKL_	ENSG00000189060|ENST00000340857|H1-0;nc|ENSG00000189060|P07305-2|H1-0	60.1669710687717	0.3643216362415131	1				NaN	NaN	0	NaN	5351	4234	9584
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9588	30.177	NaN	4043.2	30	0	585.1	0.106	+			20514	KFIDTTSKF	9	58	543.7948414579765	1085.575129982753	2	543.7955932617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KFIDTTSKF_	ENSG00000100316|ENST00000216146|RPL3;ENSG00000140986|ENST00000268661|RPL3L;ENST00000417615.1_1_14:99439218-99439536:-|nuORF;ENST00000473638.5_1_22:39708982-39709710:-|nuORF	140.11223852658463	0.010427410095706195	1				NaN	NaN	0	NaN	5352	4234	9584
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9589	30.179	NaN	2216.2	30	0	410.49	0.106	+			43459	TGNPTVIKM	9	56	480.7623006970176	959.5100484608353	2	480.7623596191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TGNPTVIKM_	ENSG00000140575|ENST00000268182|IQGAP1;ENSG00000145703|ENST00000274364|IQGAP2;ENST00000512383.1_1_5:75964652-75969784:+|nuORF;IQGAP1|p.S1529Afs*10|1|0.15|ENSG00000140575|chr15:90492665-90492665|A/-|frameshift_variant;IQGAP2|p.Q1499Rfs*15|1|0.05|ENSG00000145703|chr5:76701201-76701202|-/CCGAG|frameshift_variant;nc|ENSG00000145703|Q13576-2|IQGAP2;nc|ENSG00000145703|Q13576-3|IQGAP2	70.8162118820467	0.13725933411854815	1				NaN	NaN	0	NaN	5353	4234	9584
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9590	30.181	NaN	2626.5	30	0	723.15	0.035	+			5115	ATSRLLLLL	9	40	333.8899938298072	998.6481520896217	3	333.89013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATSRLLLLL_	ENSG00000129214|ENST00000380450|SHBG;nc|ENSG00000129214|P04278-3|SHBG;nc|ENSG00000129214|P04278-4|SHBG;nc|ENSG00000129214|P04278-5|SHBG;SHBG|p.C362Afs*2|1|0.14|ENSG00000129214|chr17:7633223-7633223|T/-|frameshift_variant;SHBG|p.L175Afs*39|1|0.38|ENSG00000129214|chr17:7631322-7631323|-/G|frameshift_variant;SHBG|p.L175Cfs*45|1|0.53|ENSG00000129214|chr17:7631323-7631323|G/-|frameshift_variant	25.57405402267927	0.5642445186134241	1				NaN	NaN	0	NaN	5354	4234	9584
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9596	30.197	NaN	5156.6	30	0	1430.1	0.214	+			44734	TTLTSQYIK	9	66	527.7926562935451	1053.57075965389	2	527.7931518554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTLTSQYIK_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	98.58198989935565	0.04066992115528678	1				NaN	NaN	0	NaN	5357	4237	9595
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9597	30.201	NaN	3229.4	30	0	1476.4	0.106			+	35633	SCGITLSRIT	10	56	350.85873799224544	1049.5543845769364	3	350.8590087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SCGITLSRIT_	REV__ENSG00000213397|ENST00000370211|HAUS7;REV__ENST00000464993.1_1_X:152722593-152735946:-|nuORF;REV__ENST00000484394.5_1_X:152720945-152722644:-|nuORF;REV__nc|ENSG00000213397|Q99871-2|HAUS7;REV__nc|ENSG00000213397|Q99871-3|HAUS7	35.61828744233558	0.588957954432594	1				NaN	NaN	0	NaN	5358	4237	9595
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9598	30.203	NaN	1897.6	30	0	145.01	0.106	+			645	AEAEAITSQKL	11	66	580.8107902701876	1159.607027607175	2	580.810791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEAEAITSQKL_	ENSG00000203697|ENST00000366872|CAPN8	74.23689240530636	0.2004180839732798	1				NaN	NaN	0	NaN	5359	4237	9595
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9599	30.204	NaN	2141	30	0	968.06	0.106	+			8691	EEAHKKERK	9	41	577.8200092037163	NaN	0	577.8197021484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EEAHKKERK_	ENSG00000127124|ENST00000372583|HIVEP3;HIVEP3|p.G2228Vfs*5|1|0.27|ENSG00000127124|chr1:41510989-41510989|C/-|frameshift_variant;HIVEP3|p.H554Tfs*20|1|0.25|ENSG00000127124|chr1:41583138-41583138|G/-|frameshift_variant;HIVEP3|p.P534Lfs*5|2|0.22|ENSG00000127124|chr1:41583197-41583197|G/-|frameshift_variant;nc|ENSG00000127124|Q5T1R4-2|HIVEP3	21.68575002086885	0.36358557434667943	1				NaN	NaN	0	NaN	5360	4237	9595
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9600	30.206	NaN	537.75	30	0	77.074	0.106			+	11542	FPGPSAPPAL	10	36	477.25885009765625	NaN	0	477.25885009765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FPGPSAPPAL_	REV__BCL2L11|p.F124Lfs*15|1|0.14|ENSG00000153094|chr2:111124113-111124114|-/A|frameshift_variant;REV__ENSG00000153094|ENST00000393256|BCL2L11;REV__nc|ENSG00000153094|O43521-10|BCL2L11;REV__nc|ENSG00000153094|O43521-11|BCL2L11;REV__nc|ENSG00000153094|O43521-14|BCL2L11;REV__nc|ENSG00000153094|O43521-19|BCL2L11;REV__nc|ENSG00000153094|O43521-4|BCL2L11;REV__nc|ENSG00000153094|O43521-8|BCL2L11	24.20275056022122	0.4201028297492154	1				NaN	NaN	0	NaN	5361	4237	9595
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9601	30.208	NaN	749.56	30	0	61.426	0.032	+			46176	VDVSGPKL	8	37	407.7371357618726	813.4597185905452	2	407.7381896972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VDVSGPKL_	AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK;ENSG00000124942|ENST00000378024|AHNAK	62.107414245175825	0.4809183816468817	1				NaN	NaN	0	NaN	5362	4237	9595
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9611	30.231	NaN	36690	30	0	18552	0.214			+	30447	PYSITVNKF	9	84	356.8622328245533	1067.5648690738599	3	356.8622741699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PYSITVNKF_	REV__ENST00000463418.5_1_2:158157328-158158798:+|nuORF	40.5726180659479	0.4135428067754104	1				NaN	NaN	0	NaN	5369	4240	9610
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9612	30.235	NaN	5727.9	30	0	1420.4	0.106				-1	 	0	65	495.2666966172913	494.2594201506913	1	495.2671813964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	5370	4240	9610
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9613	30.237	NaN	4244.1	30	0	654.69	0.106			+	27417	MKYTFTMR	8	65	560.2689941166298	1118.5234353000594	2	560.2697143554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))MKYTFTMR_	REV__ENST00000366787.7_1_6:169617590-169617689:-|nuORF	56.72105179125745	0.5342425954139568	1				NaN	NaN	0	NaN	5371	4240	9610
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9614	30.239	NaN	9310	30	0	3834.1	0.106	+			20516	KFIDTTSKF	9	44	362.8657525473777	1085.5754282423331	3	362.8658447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KFIDTTSKF_	ENSG00000100316|ENST00000216146|RPL3;ENSG00000140986|ENST00000268661|RPL3L;ENST00000417615.1_1_14:99439218-99439536:-|nuORF;ENST00000473638.5_1_22:39708982-39709710:-|nuORF	54.776311868738084	0.25715957988447635	1				NaN	NaN	0	NaN	5372	4240	9610
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9615	30.24	NaN	2194.5	30	0	382.9	0.106	+			22994	KVSDYILQH	9	60	551.7979989013199	1101.5814448694398	2	551.7989501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KVSDYILQH_	ENSG00000148219|ENST00000313400|ASTN2;nc|ENSG00000148219|O75129-2|ASTN2;nc|ENSG00000148219|O75129-3|ASTN2;nc|ENSG00000148219|O75129-4|ASTN2;nc|ENSG00000148219|O75129-6|ASTN2	56.632244143249146	0.24168844994051353	1				NaN	NaN	0	NaN	5373	4240	9610
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9616	30.242	NaN	1734.6	30	0	203.79	0.106	+			46367	VEKVPNPSL	9	59	491.78187873159237	981.5492045299848	2	491.7820739746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VEKVPNPSL_	ENSG00000225663|ENST00000455127|MCRIP1;ENST00000575090.1_1_17:79781125-79781671:-|nuORF;ENST00000576679.1_2_17:79781125-79782334:-|nuORF	65.15724298150197	0.17062369902793603	1				NaN	NaN	0	NaN	5374	4240	9610
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9617	30.244	NaN	1837.8	30	0	274.77	0.036	+			32464	QVLQTYVAF	9	58	534.7898103058025	1067.5650676784048	2	534.7904663085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QVLQTYVAF_	CCDC141|p.A1228Hfs*19|1|0.36|ENSG00000163492|chr2:178837541-178837541|A/-|frameshift_variant;CCDC141|p.M954Cfs*4|1|0.31|ENSG00000163492|chr2:178856262-178856262|T/-|frameshift_variant;ENSG00000163492|ENST00000443758|CCDC141;nc|ENSG00000163492|Q6ZP82-1|CCDC141	51.33545320467046	0.2872990594074956	1				NaN	NaN	0	NaN	5375	4240	9610
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9625	30.264	NaN	12210	30	0	1195.7	0.213	+			30737	QDLKTELLQR	10	88	622.3538222108846	1242.693091488569	2	622.3539428710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QDLKTELLQR_	EEA1|p.K257Nfs*13|2|0.34|ENSG00000102189|chr12:92851138-92851138|T/-|frameshift_variant;EEA1|p.N1389Mfs*3|1|0.33|ENSG00000102189|chr12:92776081-92776081|T/-|frameshift_variant;ENSG00000102189|ENST00000322349|EEA1	139.38205640894643	0.010918844784185366	1				NaN	NaN	0	NaN	5380	4243	9624
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9626	30.267	NaN	1386	30	0	245.92	0.106			+	-1	SFSRCMFF	8	50	520.7193044760297	NaN	0	520.71923828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_SFSRCM(Oxidation (M))FF_	REV__ENSG00000138271|ENST00000260843|GPR87	47.91560031466742	1.7418937515398478	1				NaN	NaN	0	NaN	5381	4243	9624
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9627	30.269	NaN	2483.7	30	0	438.37	0.106	+			12492	GEEGDLKTSL	10	64	524.7615122602375	1047.508471587275	2	524.76171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEEGDLKTSL_	ENSG00000066135|ENST00000372396|KDM4A;KDM4A|p.K699Sfs*7|1|0.06|ENSG00000066135|chr1:43690902-43690902|A/-|frameshift_variant	61.76455937419982	0.3497917639301274	1				NaN	NaN	0	NaN	5382	4243	9624
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9628	30.271	NaN	2112.3	30	0	440.89	0.106	+			31082	QFGNSSTSVLA	11	52	555.7744001469188	1109.5342473606374	2	555.7750244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QFGNSSTSVLA_	ENSG00000104064|ENST00000380877|GABPB1;nc|ENSG00000104064|Q06547-3|GABPB1;nc|ENSG00000104064|Q06547-4|GABPB1;nc|ENSG00000104064|Q06547|GABPB1	38.753607047826485	0.5749975102143227	1				NaN	NaN	0	NaN	5383	4243	9624
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9629	30.273	NaN	1084.9	30	0	144.88	0.106				-1	 	0	54	540.2734301618058	539.2661536952057	1	540.2735595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	5384	4243	9624
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9630	30.275	NaN	993.56	30	0	220.98	0.106			+	20684	KGPERAAL	8	33	421.24800348027617	840.4814540273524	2	421.2477111816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KGPERAAL_	REV__tr|U7T457|U7T457_FUSNUTryptophanaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00262PE=3SV=1	21.9598887501803	0.7897753010812679	1				NaN	NaN	0	NaN	5385	4243	9624
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9631	30.277	NaN	1568.6	30	0	152.8	0.035	+			2651	AQLPVIENK	9	56	506.2950968557807	1010.5756407783614	2	506.29443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AQLPVIENK_	ENSG00000122194|ENST00000308192|PLG	42.86426827375447	0.38666266728046506	1				NaN	NaN	0	NaN	5386	4243	9624
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9640	30.297	NaN	1527.1	30	0	398.61	0.215			+	3086	ASGFPGVGVF	10	44	469.24366118484875	936.4727694364975	2	469.24322509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASGFPGVGVF_	REV__ENSG00000272391|ENST00000615331|POM121C;REV__nc|ENSG00000272391|A8CG34|POM121C	47.91560031466742	0.4762067885998563	1				NaN	NaN	0	NaN	5392	4246	9639
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9641	30.3	NaN	1209.8	30	0	147.9	0.106	+			36217	SELTQPKL	8	49	458.26058736664413	914.5066218000883	2	458.26043701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SELTQPKL_	ENSG00000197601|ENST00000354817|FAR1;ENST00000524933.1_1_11:13716477-13732426:+|nuORF	71.87747018426188	0.391254423828572	1				NaN	NaN	0	NaN	5393	4246	9639
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9642	30.302	NaN	1294.2	30	0	140.57	0.106	+			11748	FSHNGMAL	8	47	438.7051065611394	875.3956601890789	2	438.7051696777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FSHNGMAL_	ENSG00000144320|ENST00000272748|LNPK;nc|ENSG00000144320|Q9C0E8-2|LNPK;nc|ENSG00000144320|Q9C0E8-3|LNPK;nc|ENSG00000144320|Q9C0E8-4|LNPK	30.503639358989545	0.7238069182250283	1				NaN	NaN	0	NaN	5394	4246	9639
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9643	30.304	NaN	1727.9	30	0	135.24	0.106			+	17592	IEEQKSTPK	9	56	530.2858009014458	1058.5570488696915	2	530.285400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IEEQKSTPK_	REV__ENSG00000152818|ENST00000367545|UTRN;REV__nc|ENSG00000152818|P46939-2|UTRN;REV__UTRN|p.G3160*|1|0.03|ENSG00000152818|chr6:144821001-144821002|AG/-|frameshift_variant;REV__UTRN|p.K1847Ffs*66|1|0.07|ENSG00000152818|chr6:144516945-144516946|-/TTTAA|frameshift_variant;REV__UTRN|p.R3003Pfs*5|1|0.27|ENSG00000152818|chr6:144793915-144793916|-/C|frameshift_variant;REV__UTRN|p.T2422Hfs*35|1|0.47|ENSG00000152818|chr6:144557282-144557282|A/-|frameshift_variant	40.77816245573522	0.41113185337114944	1				NaN	NaN	0	NaN	5395	4246	9639
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9644	30.306	NaN	2089.2	30	0	313.21	0.106			+	42082	SYFKGEETL	9	55	537.2612060798958	NaN	0	537.261962890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SYFKGEETL_	REV__FBXO24|p.I269F|1|0.26|ENSG00000106336|chr7:100594394-100594394|A/T|missense_variant	34.172542307311794	0.30503706118289736	1				NaN	NaN	0	NaN	5396	4246	9639
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9645	30.308	NaN	1614.3	30	0	294.21	0.106			+	32422	QVHNKYLSAY	10	53	611.8143315388824	1221.6141101445646	2	611.8148803710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QVHNKYLSAY_	REV__WDFY4|p.D2244N|1|0.38|ENSG00000128815|chr10:48867331-48867331|G/A|missense_variant	19.996771675451527	0.7148376616046445	1				NaN	NaN	0	NaN	5397	4246	9639
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9646	30.309	NaN	1139	30	0	109.98	0.034				-1	CVAVLTLF	8	47	461.75707106664686	NaN	0	461.7569274902344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_C(Carbamidomethyl (C))VAVLTLF_	ENSG00000077235|ENST00000356183|GTF3C1;GTF3C1|p.P1914Qfs*30|1|0.16|ENSG00000077235|chr16:27464451-27464451|G/-|frameshift_variant;GTF3C1|p.V2028Sfs*25|1|0.14|ENSG00000077235|chr16:27462329-27462329|C/-|frameshift_variant;nc|ENSG00000077235|Q12789-3|GTF3C1	37.028477286268924	1.7418937515398478	1				NaN	NaN	0	NaN	5398	4246	9639
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9654	30.328	NaN	2348.4	30	0	358.23	0.214			+	43471	TGPALHTIVV	10	45	336.534180214156	1006.580711242668	3	336.53448486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TGPALHTIVV_	REV__ENSG00000153048|ENST00000311052|CARHSP1	23.04248740728303	0.69165701907106	1				NaN	NaN	0	NaN	5403	4249	9653
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9655	30.331	NaN	2884.6	30	0	320.06	0.106	+			23431	LADDSVRSL	9	54	488.2588101049523	974.5030672767047	2	488.2588195800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LADDSVRSL_	ENSG00000138078|ENST00000409411|PREPL;nc|ENSG00000138078|Q4J6C6-2|PREPL;nc|ENSG00000138078|Q4J6C6|PREPL	68.84614121027924	0.14577793175421136	1				NaN	NaN	0	NaN	5404	4249	9653
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9656	30.333	NaN	940.1	30	0	164.48	0.106	+			19481	KASYSGVSL	9	44	456.2447226184677	NaN	0	456.2448425292969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KASYSGVSL_	ENSG00000011465|ENST00000052754|DCN;nc|ENSG00000011465|P07585-2|DCN;nc|ENSG00000011465|P07585-3|DCN;nc|ENSG00000011465|P07585-4|DCN	51.19269402634007	0.19847346126499396	1				NaN	NaN	0	NaN	5405	4249	9653
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9657	30.335	NaN	2428.7	30	0	240.91	0.106	+			42927	TEIIRQQGL	9	69	529.3033183849448	1056.5920838366894	2	529.3034057617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TEIIRQQGL_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	77.31757898189308	0.1091473830098891	1				NaN	NaN	0	NaN	5406	4249	9653
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9658	30.337	NaN	1611.9	30	0	134.36	0.106			+	-1	ALLCAPCR	8	49	480.7425842285156	NaN	0	480.7425842285156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C)	_ALLC(Carbamidomethyl (C))APC(Carbamidomethyl (C))R_	REV__ENST00000241041.7_1_11:45931313-45931427:-|nuORF	37.028477286268924	1.7418937515398478	1				NaN	NaN	0	NaN	5407	4249	9653
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9659	30.339	NaN	3347.4	30	0	527.01	0.037	+			13004	GEVDVEQHTL	10	60	563.7724866950928	1125.5304204569854	2	563.7774658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GEVDVEQHTL_	ENSG00000134057|ENST00000256442|CCNB1;ENSG00000157456|ENST00000288207|CCNB2;nc|ENSG00000134057|P14635-2|CCNB1	86.88156770896713	0.14892753630261096	1				NaN	NaN	0	NaN	5408	4249	9653
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9668	30.358	NaN	2815.1	30	0	707.74	0.214	+			42026	SVYVYKVLK	9	54	549.8313943553098	1097.6482357774196	2	549.8328247070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVYVYKVLK_	ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;nc|ENSG00000203814|Q5QNW6-2|H2BC18	66.96192283764107	0.15557981141143568	1				NaN	NaN	0	NaN	5414	4252	9667
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9669	30.362	NaN	1687.4	30	0	290.71	0.106	+			5423	ATYILEAGK	9	52	483.2685110496319	964.5224691660638	2	483.77001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATYILEAGK_	ENSG00000148444|ENST00000376836|COMMD3;ENST00000463409.6_1_10:22605382-22615407:+|nuORF;ENST00000470045.1_1_10:22605346-22607030:+|nuORF;ENST00000472673.5_1_10:22606461-22607284:+|nuORF;ENST00000479958.6_1_10:22605346-22607121:+|nuORF;ENST00000483684.1_1_10:22606823-22607748:+|nuORF;ENST00000496071.5_1_10:22605382-22607284:+|nuORF;ENST00000602574.5_1_10:22605346-22607236:+|nuORF	70.39856735676683	0.13906523160059378	1				NaN	NaN	0	NaN	5415	4252	9667
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9670	30.364	NaN	1509.4	30	0	204.36	0.106	+			798	AEFRKLSIQ	9	60	546.3129959988821	1090.6114390645641	2	546.3140258789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEFRKLSIQ_	tr|U7SPB5|U7SPB5_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01801PE=4SV=1	33.921630207806714	0.48623198279849766	1				NaN	NaN	0	NaN	5416	4252	9667
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9671	30.366	NaN	1892	30	0	311.02	0.036	+			33820	RQSSSDSGIAT	11	56	554.7666913098873	1107.5188296865745	2	554.7667846679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RQSSSDSGIAT_	DOK7|p.S422Hfs*34|2|0.24|ENSG00000175920|chr4:3493243-3493243|C/-|frameshift_variant;ENSG00000175920|ENST00000340083|DOK7;nc|ENSG00000175920|Q18PE1-2|DOK7;nc|ENSG00000175920|Q18PE1-3|DOK7	38.753607047826485	0.5749975102143227	1				NaN	NaN	0	NaN	5417	4252	9667
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9678	30.382	NaN	1331.1	30	0	201.68	0.142				-1	VCVSVCVSV	9	49	476.23714914333806	NaN	0	476.2372131347656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_VCVSVC(Carbamidomethyl (C))VSV_	ENST00000226328.8_1_4:71588214-71588337:+|nuORF;REV__ENST00000226328.8_1_4:71588214-71588337:+|nuORF	37.15910966729921	0.2899585034171616	1				NaN	NaN	0	NaN	5421	4255	9677
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9687	30.404	NaN	3385.2	30	0	2124.4	0.214			+	12929	GESLQVPQLA	10	55	521.2823177740416	1040.5500826148832	2	521.2825927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GESLQVPQLA_	REV__PIK3R3|p.G399Efs*84|1|0.05|ENSG00000117461|chr1:46043863-46043864|-/TGTT|frameshift_variant	23.52269567125451	0.6877354443478558	1				NaN	NaN	0	NaN	5427	4258	9686
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9688	30.408	NaN	1355.3	30	0	133.55	0.106	+			23300	KYNGEPVQI	9	56	524.2774323755368	NaN	0	524.27685546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KYNGEPVQI_	ENSG00000127831|ENST00000248444|VIL1	52.936696900407355	0.1864545979552969	1				NaN	NaN	0	NaN	5428	4258	9686
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9689	30.41	NaN	2271.6	30	0	417.42	0.038	+			12479	GEDSKQALQQL	11	62	608.8121718059303	1215.6097906786606	2	608.8123168945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEDSKQALQQL_	ENSG00000143375|ENST00000271636|CGN	58.62960593111931	0.3356877741313683	1				NaN	NaN	0	NaN	5429	4258	9686
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9695	30.425	NaN	2145.1	30	0	293.95	0.214				-1	RTCKRSCL	8	54	540.7755329997241	NaN	0	540.775390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_RTC(Carbamidomethyl (C))KRSC(Carbamidomethyl (C))L_	ENST00000547526.1_1_12:57910914-57914246:-|nuORF	49.44154591367651	1.7418937515398478	1				NaN	NaN	0	NaN	5432	4261	9694
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9696	30.428	NaN	1705.6	30	0	193.71	0.106	+			18677	ITAKVATHL	9	50	477.29239678546537	952.5702406377308	2	477.2924499511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ITAKVATHL_	ENSG00000116147|ENST00000367674|TNR;nc|ENSG00000116147|Q92752-2|TNR	35.61828744233558	0.47037581924408073	1				NaN	NaN	0	NaN	5433	4261	9694
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9697	30.43	NaN	1243.1	30	0	98.685	0.106			+	26320	LSVVNCNVP	9	49	472.7450919622872	943.4756309913744	2	472.276611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSVVNCNVP_	REV__ENST00000341285.7_2_4:15607138-15607243:-|nuORF	60.11826168202944	0.21262886028301267	1				NaN	NaN	0	NaN	5434	4261	9694
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9698	30.432	NaN	2440.2	30	0	300.46	0.106			+	30321	PTQPPRAPEL	10	55	553.3036190661437	1104.5926851990873	2	553.3045654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PTQPPRAPEL_	REV__ENSG00000178184|ENST00000353265|PARD6G	29.550750289552195	0.6385079145554603	1				NaN	NaN	0	NaN	5435	4261	9694
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9699	30.434	NaN	1449.5	30	0	287.26	0.035	+			23965	LDTFLDRC	8	49	491.7350919242851	NaN	0	491.7357482910156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LDTFLDRC_	ENST00000240055.7_1_12:104529243-104532019:-|nuORF;REV__ENST00000256383.8_1_14:67852590-67852770:+|nuORF	45.9519527083369	1.7418937515398478	1				NaN	NaN	0	NaN	5436	4261	9694
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9707	30.454	NaN	2285.4	30	0	142.4	0.214	+			50769	YEKQDTLL	8	60	505.2636272460951	1008.5127015589902	2	505.263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YEKQDTLL_	ENSG00000134910|ENST00000392708|STT3A;ENST00000534472.5_1_11:125465789-125479519:+|nuORF;STT3A|p.F106Sfs*45|2|0.41|ENSG00000134910|chr11:125602843-125602843|T/-|frameshift_variant	74.25504064058377	0.37144338840759816	1				NaN	NaN	0	NaN	5441	4264	9706
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9708	30.457	NaN	3103.6	30	0	661.31	0.106			+	24100	LEKKLSTP	8	57	458.2790301220048	914.5435073108097	2	458.2789001464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LEKKLSTP_	REV__ENSG00000102921|ENST00000262384|N4BP1;REV__ENST00000564124.5_1_16:48580029-48653834:-|nuORF;REV__N4BP1|p.I719Mfs*8|1|0.17|ENSG00000102921|chr16:48548066-48548075|ATTTGTCACA/-|frameshift_variant;REV__N4BP1|p.N610Mfs*8|2|0.17|ENSG00000102921|chr16:48560814-48560814|T/-|frameshift_variant	64.20726635412375	0.4601301477144759	1				NaN	NaN	0	NaN	5442	4264	9706
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9709	30.459	NaN	2131.3	30	0	382.06	0.106	+			18928	IVNDFAYMK	9	53	558.7729854006373	1115.5314178680744	2	558.7738647460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_IVNDFAYM(Oxidation (M))K_	ENSG00000170348|ENST00000303575|TMED10;ENST00000534816.1_1_8:146220430-146220868:+|nuORF;ENST00000555036.1_1_14:75602424-75614456:-|nuORF;ENST00000555873.1_1_14:75601590-75605782:-|nuORF;ENST00000556969.5_1_14:75601590-75614465:-|nuORF	72.87924865735499	0.12833875048249987	1				NaN	NaN	0	NaN	5443	4264	9706
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9710	30.461	NaN	2228.6	30	0	249.98	0.106			+	33233	RFYPSSAALV	10	64	555.8003480092437	1109.5861430852874	2	555.8014526367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RFYPSSAALV_	REV__ENSG00000177125|ENST00000319119|ZBTB34;REV__ENSG00000185278|ENST00000367701|ZBTB37;REV__nc|ENSG00000177125|Q8NCN2|ZBTB34;REV__nc|ENSG00000185278|Q5TC79-2|ZBTB37;REV__nc|ENSG00000185278|Q5TC79-3|ZBTB37;REV__ZBTB34|p.S187Afs*29|1|0.2|ENSG00000177125|chr9:126879965-126879965|C/-|frameshift_variant;REV__ZBTB37|p.I398Dfs*70|1|0.34|ENSG00000185278|chr1:173885799-173885800|-/G|frameshift_variant	45.97224482568171	0.49411383603842696	1				NaN	NaN	0	NaN	5444	4264	9706
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9711	30.463	NaN	1803.3	30	0	136.91	0.106	+			18324	IPTRVVTNY	9	60	531.8009309038083	1061.5873088744165	2	531.8012084960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IPTRVVTNY_	ENSG00000198959|ENST00000361475|TGM2;ENST00000468262.5_1_20:36766485-36793648:-|nuORF;nc|ENSG00000198959|P21980-2|TGM2	47.95952297671804	0.32689736945648856	1				NaN	NaN	0	NaN	5445	4264	9706
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9712	30.464	NaN	1822.9	30	0	237.33	0.106	+			34	AAALFTIHK	9	59	486.2868336654534	970.5591143977068	2	486.28656005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AAALFTIHK_	ENSG00000061676|ENST00000361354|NCKAP1;nc|ENSG00000061676|Q9Y2A7-2|NCKAP1	69.6276240434122	0.14239879520340665	1				NaN	NaN	0	NaN	5446	4264	9706
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9713	30.466	NaN	1928.6	30	0	331.62	0.034	+			8425	EAQRNISL	8	45	465.7533088174123	NaN	0	465.75360107421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EAQRNISL_	ENSG00000015520|ENST00000381160|NPC1L1;nc|ENSG00000015520|Q9UHC9-2|NPC1L1;nc|ENSG00000015520|Q9UHC9-3|NPC1L1;nc|ENSG00000015520|Q9UHC9-4|NPC1L1;nc|ENSG00000015520|Q9UHC9|NPC1L1;NPC1L1|p.L475Sfs*35|2|0.12|ENSG00000015520|chr7:44538974-44538974|G/-|frameshift_variant	56.72105179125745	1.7418937515398478	1				NaN	NaN	0	NaN	5447	4264	9706
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9718	30.481	NaN	1742.9	30	0	611	0.214			+	7666	DLANKVPKG	9	38	471.27448689164345	940.5344208500869	2	471.2740783691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DLANKVPKG_	REV__ENSG00000146070|ENST00000274793|PLA2G7;REV__PLA2G7|p.I267*|1|0.17|ENSG00000146070|chr6:46709397-46709397|T/-|frameshift_variant	26.69291269510374	0.5537881896960711	1				NaN	NaN	0	NaN	5449	4267	9717
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9719	30.484	NaN	1775.1	30	0	796.13	0.106	+			35	AAALFTIHK	9	41	324.5271642043725	970.5596632133177	3	324.5272521972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAALFTIHK_	ENSG00000061676|ENST00000361354|NCKAP1;nc|ENSG00000061676|Q9Y2A7-2|NCKAP1	29.14955571784316	0.5308295550522326	1				NaN	NaN	0	NaN	5450	4267	9717
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9720	30.486	NaN	1746.5	30	0	218.36	0.106	+			20564	KFSPNTSQF	9	53	528.2618445026694	NaN	0	528.2620239257812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KFSPNTSQF_	BUB3|p.I231Gfs*30|1|0.05|ENSG00000154473|chr10:123162349-123162350|-/GGTAA|frameshift_variant;ENSG00000154473|ENST00000368865|BUB3;nc|ENSG00000154473|O43684-2|BUB3	76.16968421966216	0.08450868013726211	1				NaN	NaN	0	NaN	5451	4267	9717
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9721	30.488	NaN	1290.9	30	0	413.9	0.106	+			18947	IVPGNVKSL	9	40	463.78677725892305	925.5590015846461	2	463.7867736816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IVPGNVKSL_	ENSG00000112159|ENST00000369393|MDN1;MDN1|p.E2692*|2|0.32|ENSG00000112159|chr6:89706133-89706134|-/A|frameshift_variant;MDN1|p.F2691Lfs*7|2|0.37|ENSG00000112159|chr6:89706134-89706134|A/-|frameshift_variant;MDN1|p.K2642Nfs*17|2|0.29|ENSG00000112159|chr6:89707449-89707449|T/-|frameshift_variant;MDN1|p.L4077Cfs*15|1|0.16|ENSG00000112159|chr6:89680625-89680625|G/-|frameshift_variant;MDN1|p.L5278Ffs*6|1|0.18|ENSG00000112159|chr6:89652273-89652274|-/A|frameshift_variant	44.377184641726394	0.36891676396732553	1				NaN	NaN	0	NaN	5452	4267	9717
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9722	30.49	NaN	1412.1	30	0	204.09	0.035	+			17477	ICQSWVGQI	9	60	517.2620596406401	1032.5095663480802	2	517.2614135742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ICQSWVGQI_	HERVH-int_dup3524|chrX:4541521-4542183:-|2.9075701410676067|0.0031813577269869|9.84|447.0|43|3|anti-sense	58.78195531508484	0.22376836668196862	1				NaN	NaN	0	NaN	5453	4267	9717
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9728	30.506	NaN	3405.2	30	0	671.77	0.214	+			50532	YAPVHADDL	9	58	500.7403525908773	999.4661522485546	2	500.74029541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YAPVHADDL_	ENSG00000064651|ENST00000262461|SLC12A2;ENST00000504416.5_1_5:127493760-127503560:+|nuORF;ENST00000509616.1_1_5:127493760-127507455:+|nuORF;nc|ENSG00000064651|P55011-3|SLC12A2;SLC12A2|p.E1119Rfs*7|1|0.47|ENSG00000064651|chr5:128184417-128184418|-/A|frameshift_variant;SLC12A2|p.P1171Sfs*18|1|0.38|ENSG00000064651|chr5:128186498-128186499|-/TC|frameshift_variant	73.97473282117947	0.12360187025703594	1				NaN	NaN	0	NaN	5456	4270	9727
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9729	30.51	NaN	1916.7	30	0	212.12	0.106			+	20227	KELQQLQEL	9	61	564.8171059591733	NaN	0	564.817138671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KELQQLQEL_	REV__ENSG00000204120|ENST00000373563|GIGYF2;REV__ENST00000482952.5_1_2:233671364-233680450:+|nuORF;REV__GIGYF2|p.A735Yfs*90|1|0.05|ENSG00000204120|chr2:232815731-232815732|-/TACACACATG|frameshift_variant;REV__nc|ENSG00000204120|Q6Y7W6-3|GIGYF2;REV__nc|ENSG00000204120|Q6Y7W6-4|GIGYF2;REV__nc|ENSG00000204120|Q6Y7W6-5|GIGYF2	70.8162118820467	0.10318768208603292	1				NaN	NaN	0	NaN	5457	4270	9727
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9730	30.512	NaN	1768.6	30	0	311.24	0.106	+			39913	STMAIIVNK	9	60	488.77769826468807	975.5408435961762	2	488.7778625488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STMAIIVNK_	ENSG00000082898|ENST00000401558|XPO1;ENST00000428210.5_1_2:61705957-61719950:-|nuORF;ENST00000461407.5_1_2:61712881-61715780:-|nuORF;ENST00000492182.5_1_2:61710065-61713073:-|nuORF	87.69643885390035	0.07135982304947239	1				NaN	NaN	0	NaN	5458	4270	9727
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9731	30.514	NaN	3824.4	30	0	998.37	0.106				-1	 	0	33	377.7459985114089	753.4774440896178	2	377.7460021972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	5459	4270	9727
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9732	30.515	NaN	2333.6	30	0	259.33	0.106	+			45194	TVNNIIQVK	9	63	514.8090722888666	1027.603591644533	2	514.80908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TVNNIIQVK_	ENSG00000111725|ENST00000229328|PRKAB1	66.96192283764107	0.15557981141143568	1				NaN	NaN	0	NaN	5460	4270	9727
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9733	30.517	NaN	1899.8	30	0	241.61	0.106	+			45780	VAGEVQGKVK	10	64	507.8001708984375	NaN	0	507.8001708984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VAGEVQGKVK_	tr|U7T0U8|U7T0U8_FUSNUTranslationinitiationfactorIF-2OS=FusobacteriumnucleatumCTI-5OX=1316586GN=infBPE=3SV=1	35.15202426646627	0.38475398474706135	1				NaN	NaN	0	NaN	5461	4270	9727
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9734	30.519	NaN	1305.5	30	0	164.9	0.035			+	26049	LSLLWYVV	8	48	496.7925975648919	991.5706421965838	2	496.7923889160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSLLWYVV_	REV__ENSG00000110108|ENST00000227525|TMEM109	54.76467175910256	0.5536104764165384	1				NaN	NaN	0	NaN	5462	4270	9727
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9746	30.544	NaN	2567.2	30	0	488.36	0.214			+	-1	VLEPCLAL	8	57	457.7561942066231	NaN	0	457.7561340332031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_VLEPC(Carbamidomethyl (C))LAL_	REV__HMGXB3|p.A1198V|1|0.31|ENSG00000113716|chr5:150045590-150045590|C/T|missense_variant	46.76643321282427	1.7418937515398478	1				NaN	NaN	0	NaN	5471	4273	9745
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9747	30.548	NaN	1464.3	30	0	171.68	0.106	+			20515	KFIDTTSKF	9	57	543.7948414579765	1085.575129982753	2	543.7957763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KFIDTTSKF_	ENSG00000100316|ENST00000216146|RPL3;ENSG00000140986|ENST00000268661|RPL3L;ENST00000417615.1_1_14:99439218-99439536:-|nuORF;ENST00000473638.5_1_22:39708982-39709710:-|nuORF	58.2462437865262	0.22823408064396822	1				NaN	NaN	0	NaN	5472	4273	9745
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9748	30.55	NaN	2050.2	30	0	477.9	0.106	+			28975	NSIEVRIT	8	48	466.2636623227045	930.512771712209	2	466.2635498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NSIEVRIT_	ENSG00000226761|ENST00000533467|TAS2R46	49.44154591367651	0.597725784090933	1				NaN	NaN	0	NaN	5473	4273	9745
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9749	30.552	NaN	1625.3	30	0	197.47	0.106	+			24692	LHCECISY	8	56	512.7151400117488	1023.4157270902975	2	512.71533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_LHCEC(Carbamidomethyl (C))ISY_	ENST00000541310.5_1_12:22631189-22697084:-|nuORF	54.76467175910256	0.5536104764165384	1				NaN	NaN	0	NaN	5474	4273	9745
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9750	30.554	NaN	2124	30	0	188.24	0.106				-1	RHYCMRLTC	9	52	648.7898161529406	1295.565079372681	2	648.7885131835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C)	_RHYC(Carbamidomethyl (C))MRLTC(Carbamidomethyl (C))_	DNAH6|p.L3633*|2|0.38|ENSG00000115423|chr2:84784749-84784749|T/-|frameshift_variant;DNAH6|p.R2682Kfs*27|1|0.42|ENSG00000115423|chr2:84701316-84701317|-/A|frameshift_variant;DNAH6|p.S3773Lfs*5|1|0.09|ENSG00000115423|chr2:84796377-84796377|T/-|frameshift_variant;ENSG00000115423|ENST00000389394|DNAH6;ENST00000476689.5_1_2:84775422-84811380:+|nuORF;nc|ENSG00000115423|Q9C0G6-3|DNAH6;nc|ENSG00000115423|Q9C0G6-4|DNAH6	30.503639358989545	0.5181749237905803	1				NaN	NaN	0	NaN	5475	4273	9745
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9751	30.555	NaN	1662.6	30	0	154.66	0.106			+	8289	EAIILRKSM	9	57	530.8117246110966	1059.608896288993	2	531.31298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EAIILRKSM_	REV__tr|U7SYG8|U7SYG8_FUSNUDNAtopoisomeraseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00874PE=3SV=1	51.52775601994872	0.28504342437107444	1				NaN	NaN	0	NaN	5476	4273	9745
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9752	30.557	NaN	1565.3	30	0	189.77	0.035	+			18019	IIKKPDLR	8	53	491.82383220031426	NaN	0	491.8236389160156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IIKKPDLR_	ENSG00000175820|ENST00000322527|CCDC168	20.481830146152948	1.741893751539848	1				NaN	NaN	0	NaN	5477	4273	9745
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9760	30.575	NaN	5664.7	30	0	2026.9	0.214			+	-1	LLQRYSVDN	9	62	575.2980053151933	1148.5814576971866	2	575.2985229492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LLQRYSVDN_	REV__ENSG00000152578|ENST00000282499|GRIA4;REV__ENST00000525032.1_1_11:105481676-105732994:+|nuORF;REV__GRIA4|p.M436Cfs*13|1|0.32|ENSG00000152578|chr11:105918746-105918746|A/-|frameshift_variant;REV__GRIA4|p.N188I|1|0.29|ENSG00000152578|chr11:105862099-105862099|A/T|missense_variant;REV__nc|ENSG00000152578|P48058-2|GRIA4	25.57405402267927	0.5642445186134241	1				NaN	NaN	0	NaN	5482	4276	9759
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9761	30.579	NaN	1610.9	30	0	153.46	0.106			+	24981	LLDKWVRH	8	54	533.8121091359692	1065.6096653387383	2	533.8125610351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LLDKWVRH_	REV__ENSG00000110871|ENST00000288532|COQ5	27.882242232435846	0.7440473649773525	1				NaN	NaN	0	NaN	5483	4276	9759
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9762	30.581	NaN	1126.3	30	0	144.34	0.036				-1	TVLLCRLSV	9	49	530.8117246110966	1059.608896288993	2	530.8110961914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_TVLLC(Carbamidomethyl (C))RLSV_	ENST00000486274.5_1_3:99980056-99980248:+|nuORF	47.657333605630114	0.33044192980041115	1				NaN	NaN	0	NaN	5484	4276	9759
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9768	30.597	NaN	2330.5	30	0	762.94	0.215	+			45366	TVTCFMTI	8	57	466.2169110628843	930.4192691925687	2	466.2166748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_TVTCFM(Oxidation (M))TI_	ENST00000519493.1_1_8:19690706-19694700:+|nuORF	71.37791200682192	0.3954169775488141	1				NaN	NaN	0	NaN	5487	4279	9767
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9769	30.601	NaN	2068.6	30	0	789.06	0.035	+			32685	RAGEWKLGA	9	48	494.2716144379188	986.5286759426376	2	494.27130126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RAGEWKLGA_	SCYL1|p.G159Afs*110|1|0.37|ENSG00000142186|chr11:65526220-65526220|G/-|frameshift_variant	20.94693142431847	0.6074874384046576	1				NaN	NaN	0	NaN	5488	4279	9767
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9773	30.615	NaN	1320.9	30	0	370	0.214			+	-1	TWPLPCAPW	9	49	564.2737894179103	NaN	0	564.2733764648438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_TWPLPC(Carbamidomethyl (C))APW_	REV__ENST00000269321.11_1_17:79825624-79826158:-|nuORF	29.841539824830324	0.32690339240668626	1				NaN	NaN	0	NaN	5489	4282	9772
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9774	30.618	NaN	1194.7	30	0	133.34	0.106				-1	MFGIKNFSAI	10	41	593.3040245005701	NaN	0	593.3049926757812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))M(Oxidation (M))FGIKNFSAI_	ENSG00000150768|ENST00000280346|DLAT;ENST00000527231.1_1_11:111931791-111931899:+|nuORF;ENST00000533297.1_1_11:111896132-111933256:+|nuORF	24.519189625965996	0.41966695327750003	1				NaN	NaN	0	NaN	5490	4282	9772
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9775	30.62	NaN	2209.4	30	0	251.1	0.106	+			10930	FDNLQRVK	8	61	510.28516750592655	1018.5557820786531	2	510.28570556640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FDNLQRVK_	MYH3|p.I1208F|1|0.39|ENSG00000109063|chr17:10638150-10638150|T/A|missense_variant	69.6276240434122	0.4100012001731381	1				NaN	NaN	0	NaN	5491	4282	9772
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9776	30.622	NaN	1357.1	30	0	106.6	0.035	+			10962	FEAPDQKTL	9	59	524.7701821987765	1047.525811464353	2	524.7692260742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FEAPDQKTL_	ENSG00000117523|ENST00000647382|PRRC2C;nc|ENSG00000117523|Q9Y520-2|PRRC2C;nc|ENSG00000117523|Q9Y520-3|PRRC2C;nc|ENSG00000117523|Q9Y520-4|PRRC2C;nc|ENSG00000117523|Q9Y520-5|PRRC2C;nc|ENSG00000117523|Q9Y520-6|PRRC2C;nc|ENSG00000117523|Q9Y520|PRRC2C;PRRC2C|p.K1018Nfs*7|1|0.21|ENSG00000117523|chr1:171540521-171540521|A/-|frameshift_variant;PRRC2C|p.P2791Lfs*5|1|0.1|ENSG00000117523|chr1:171591761-171591761|C/-|frameshift_variant	61.691277971877994	0.19951612995419254	1				NaN	NaN	0	NaN	5492	4282	9772
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9782	30.638	NaN	1316.8	30	0	261.48	0.214			+	-1	STHVGVASSPL	11	58	548.7843471487273	1095.5541413642545	2	548.7852172851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))STHVGVASSPL_	REV__chr7:34844982-34848483|195|25.16|0.11|7.9|+|0|NPSR1,NPSR1|1	31.529811441608018	0.6590691889962369	1				NaN	NaN	0	NaN	5495	4285	9781
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9783	30.642	NaN	1303.7	30	0	341.58	0.034			+	25229	LNAKTPQLG	9	49	471.27448689164345	940.5344208500869	2	471.776611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LNAKTPQLG_	REV__ENSG00000114841|ENST00000420323|DNAH1;REV__ENST00000486752.5_1_3:52350520-52422757:+|nuORF;REV__nc|ENSG00000114841|Q9P2D7-6|DNAH1;REV__nc|ENSG00000114841|Q9P2D7-8|DNAH1	40.77816245573522	0.41113185337114944	1				NaN	NaN	0	NaN	5496	4285	9781
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9788	30.656	NaN	3563.3	30	0	664.66	0.214	+			2679	AQNPSLFVK	9	61	502.28207660223944	1002.5496002712789	2	502.2820129394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AQNPSLFVK_	ENSG00000117410|ENST00000472174|ATP6V0B;nc|ENSG00000117410|Q99437-2|ATP6V0B	45.97224482568171	0.3502073465782774	1				NaN	NaN	0	NaN	5498	4288	9787
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9789	30.66	NaN	3863.2	30	0	1940.7	0.106	+			41196	SVLDLSVHK	9	39	333.19384447091414	996.5597040129425	3	333.1938171386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVLDLSVHK_	ENSG00000116731|ENST00000311066|PRDM2;nc|ENSG00000116731|Q13029-2|PRDM2;nc|ENSG00000116731|Q13029-3|PRDM2;nc|ENSG00000116731|Q13029-5|PRDM2;PRDM2|p.G1390Efs*14|1|0.21|ENSG00000116731|chr1:13781963-13781964|GG/-|frameshift_variant;PRDM2|p.N1426Ifs*3|1|0.17|ENSG00000116731|chr1:13782065-13782065|A/-|frameshift_variant;PRDM2|p.P1648Qfs*14|1|0.24|ENSG00000116731|chr1:13782731-13782731|G/-|frameshift_variant	70.8162118820467	0.13725933411854815	1				NaN	NaN	0	NaN	5499	4288	9787
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9790	30.662	NaN	2618.9	30	0	219.05	0.106			+	-1	LEYAPDRSRRC	11	79	711.8478393554688	NaN	0	711.8478393554688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LEYAPDRSRRC(Carbamidomethyl (C))_	REV__ENSG00000140391|ENST00000267970|TSPAN3;REV__nc|ENSG00000140391|O60637-2|TSPAN3;REV__nc|ENSG00000140391|O60637-3|TSPAN3	28.081489160057373	0.4402687122534875	1				NaN	NaN	0	NaN	5500	4288	9787
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9791	30.664	NaN	2082.6	30	0	295.62	0.034	+			8408	EAPSSRASL	9	51	459.2376044633108	916.4606559934216	2	459.2377014160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EAPSSRASL_	ENST00000258796.11_1_7:2701866-2702169:+|nuORF	51.33545320467046	0.2872990594074956	1				NaN	NaN	0	NaN	5501	4288	9787
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9798	30.682	NaN	2521.2	30	0	544.43	0.214			+	26944	LYGKVQEL	8	49	475.2711287319481	948.5277045306963	2	475.2704772949219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LYGKVQEL_	REV__ENSG00000163817|ENST00000358525|SLC6A20;REV__nc|ENSG00000163817|Q9NP91-2|SLC6A20	66.42927471994793	0.4381325844043345	1				NaN	NaN	0	NaN	5505	4291	9797
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9799	30.685	NaN	2097.6	30	0	273.17	0.106	+			447	AAVGYIMEK	9	60	491.25703967426773	NaN	0	491.2567443847656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAVGYIMEK_	ENSG00000111361|ENST00000424014|EIF2B1	63.53385203322761	0.134247007536971	1				NaN	NaN	0	NaN	5506	4291	9797
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9800	30.687	NaN	2280.8	30	0	372.17	0.106	+			28245	NDHQDLVSV	9	55	513.7463223385491	1025.4780917438982	2	513.74609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NDHQDLVSV_	ENSG00000137857|ENST00000389037|DUOX1;ENSG00000140279|ENST00000389039|DUOX2;ENST00000561220.6_1_15:45434150-45457096:+|nuORF;nc|ENSG00000137857|Q9NRD9-2|DUOX1;nc|ENSG00000140279|Q9NRD8|DUOX2	39.252832667884924	0.4290233611298554	1				NaN	NaN	0	NaN	5507	4291	9797
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9801	30.689	NaN	879.77	30	0	100.06	0.106			+	17427	IATLAVHS	8	39	406.2373749239561	NaN	0	406.23724365234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IATLAVHS_	REV__ENSG00000205978|ENST00000382554|NYNRIN;REV__NYNRIN|p.A1288Rfs*152|1|0.45|ENSG00000205978|chr14:24415606-24415606|C/-|frameshift_variant;REV__NYNRIN|p.G1206Vfs*50|1|0.1|ENSG00000205978|chr14:24415362-24415362|G/-|frameshift_variant	33.51558372728122	1.7418937515398478	1				NaN	NaN	0	NaN	5508	4291	9797
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9802	30.691	NaN	2362.6	30	0	447.08	0.106	+			43336	TGATLYLLR	9	47	336.5341396426809	1006.5805895282426	3	336.53375244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TGATLYLLR_	ENSG00000189043|ENST00000339600|NDUFA4;ENST00000486007.1_1_7:10977674-10979684:-|nuORF;NDUFA4|p.A37T|1|0.4|ENSG00000189043|chr7:10938830-10938830|C/T|missense_variant	24.20275056022122	0.577060078256802	1				NaN	NaN	0	NaN	5509	4291	9797
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9803	30.693	NaN	4069.2	30	0	357.87	0.036	+			15191	GTSQLYVYR	9	65	543.7824510538878	1085.5503491745756	2	544.2844848632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTSQLYVYR_	CPSF1|p.A1319Pfs*42|2|0.23|ENSG00000071894|chr8:144393943-144393943|C/-|frameshift_variant;CPSF1|p.P950Lfs*6|1|0.13|ENSG00000071894|chr8:144396478-144396478|G/-|frameshift_variant;CPSF1|p.V640Wfs*20|1|0.36|ENSG00000071894|chr8:144398110-144398110|G/-|frameshift_variant;ENSG00000071894|ENST00000616140|CPSF1	88.17693792209575	0.07000514020414955	1				NaN	NaN	0	NaN	5510	4291	9797
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9809	30.708	NaN	13957	30	0	1861.7	0.214	+			36825	SIFDGRVVAK	10	76	546.3134068199103	1090.6122607066204	2	546.3141479492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIFDGRVVAK_	ENSG00000143183|ENST00000367881|TMCO1;nc|ENSG00000143183|Q9UM00-2|TMCO1;nc|ENSG00000143183|Q9UM00|TMCO1	101.45984612302182	0.07336148045341315	1				NaN	NaN	0	NaN	5513	4294	9808
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9810	30.711	NaN	1893.5	30	0	344.37	0.106	+			38523	SSCPQQWIK	9	51	567.2733319254835	1132.5321109177669	2	567.2739868164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SSC(Carbamidomethyl (C))PQQWIK_	ENSG00000168275|ENST00000366615|COA6;nc|ENSG00000168275|Q5JTJ3-3|COA6;nc|ENSG00000168275|Q5JTJ3|COA6	47.657333605630114	0.33044192980041115	1				NaN	NaN	0	NaN	5514	4294	9808
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9811	30.713	NaN	2571.6	30	0	475.77	0.041			+	-1	VNRVNDLMWRL	11	60	716.3814887656906	1430.7484245981811	2	716.3809204101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_VNRVNDLM(Oxidation (M))WRL_	REV__ENSG00000196475|ENST00000358842|GK2;REV__GK2|p.F535Lfs*2|1|0.08|ENSG00000196475|chr4:79406596-79406596|A/-|frameshift_variant	22.579656572578934	0.7529490144093228	1				NaN	NaN	0	NaN	5515	4294	9808
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9818	30.729	NaN	2799.6	30	0	1174.1	0.144	+			23102	KVVFPRVAQ	9	56	522.323258688886	1042.6319644445718	2	522.3228149414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVVFPRVAQ_	ENSG00000092421|ENST00000343348|SEMA6A;ENST00000510024.5_1_5:115822443-115824680:-|nuORF;nc|ENSG00000092421|Q9H2E6-2|SEMA6A;SEMA6A|p.K1013Nfs*11|1|0.19|ENSG00000092421|chr5:116446670-116446670|G/-|frameshift_variant;SEMA6A|p.K1013Qfs*15|1|0.45|ENSG00000092421|chr5:116446669-116446670|-/G|frameshift_variant;SEMA6A|p.N990Mfs*8|1|0.1|ENSG00000092421|chr5:116446737-116446738|-/GTACA|frameshift_variant;SEMA6A|p.R918Efs*23|1|0.25|ENSG00000092421|chr5:116446955-116446956|-/T|frameshift_variant;SEMA6A|p.V881Ffs*20|2|0.21|ENSG00000092421|chr5:116447069-116447069|G/-|frameshift_variant	42.86426827375447	0.38666266728046506	1				NaN	NaN	0	NaN	5519	4297	9817
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9827	30.751	NaN	3360.5	30	0	1904.2	0.214			+	23600	LANLTPDGLQ	10	56	521.2823177740416	1040.5500826148832	2	521.2825317382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LANLTPDGLQ_	REV__ENSG00000178921|ENST00000314666|PFAS;REV__PFAS|p.D615Mfs*45|1|0.41|ENSG00000178921|chr17:8264259-8264259|G/-|frameshift_variant	39.252832667884924	0.5560298534376815	1				NaN	NaN	0	NaN	5525	4300	9826
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9828	30.755	NaN	2426.3	30	0	879.57	0.106			+	32000	QRHQYWVV	8	45	558.2924939803738	1114.5704350275475	2	558.293212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QRHQYWVV_	REV__ENSG00000089472|ENST00000343002|HEPH;REV__nc|ENSG00000089472|Q9BQS7-2|HEPH;REV__nc|ENSG00000089472|Q9BQS7-3|HEPH;REV__nc|ENSG00000089472|Q9BQS7-4|HEPH	19.359975847455235	0.7988239741663654	1				NaN	NaN	0	NaN	5526	4300	9826
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9829	30.757	NaN	1044.6	30	0	180.59	0.036	+			26266	LSTASRSILM	10	56	539.7993240314487	NaN	0	539.7981567382812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSTASRSILM_	ENST00000579482.5_1_17:72859347-72866165:-|nuORF	34.172542307311794	0.38797011891751465	1				NaN	NaN	0	NaN	5527	4300	9826
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9839	30.779	NaN	6903.6	30	0	1285.6	0.214	+			10322	ETRWPESL	8	69	509.25359909244645	1016.4926452516929	2	509.2533264160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ETRWPESL_	ENST00000396578.7_1_2:228029329-228029443:+|nuORF	82.30502934623384	0.30436709589983096	1				NaN	NaN	0	NaN	5534	4303	9838
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9840	30.782	NaN	1072.9	30	0	197.36	0.106			+	14623	GTGLRFPR	8	43	452.26047646949655	902.5064000057931	2	452.2603454589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTGLRFPR_	REV__ENSG00000173064|ENST00000682272|HECTD4;REV__HECTD4|p.A3108Gfs*4|1|0.12|ENSG00000173064|chr12:112185242-112185243|CC/-|frameshift_variant;REV__HECTD4|p.A3108Rfs*26|1|0.37|ENSG00000173064|chr12:112185242-112185242|C/-|frameshift_variant;REV__HECTD4|p.A4187Pfs*44|1|0.07|ENSG00000173064|chr12:112163201-112163201|C/-|frameshift_variant;REV__HECTD4|p.L1880Pfs*22|1|0.19|ENSG00000173064|chr12:112231674-112231675|-/TAGGA|frameshift_variant;REV__nc|ENSG00000173064|Q9Y4D8-2|HECTD4;REV__nc|ENSG00000173064|Q9Y4D8-4|HECTD4;REV__nc|ENSG00000173064|Q9Y4D8|HECTD4	57.81127852772723	0.5234495074909924	1				NaN	NaN	0	NaN	5535	4303	9838
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9841	30.784	NaN	2151.9	30	0	162.29	0.106	+			21639	KPTELCAGHL	10	62	534.7800610681111	1067.545569203022	2	535.2804565429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KPTELCAGHL_	CON__P06868	40.77816245573522	0.5419747034533848	1				NaN	NaN	0	NaN	5536	4303	9838
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9842	30.786	NaN	1229.1	30	0	223.22	0.106			+	-1	NKKCDECVVC	10	36	599.2564086914062	NaN	0	599.2564086914062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_NKKCDECVVC(Carbamidomethyl (C))_	REV__ENSG00000089169|ENST00000389385|RPH3A;REV__nc|ENSG00000089169|Q9Y2J0-2|RPH3A	21.9598887501803	0.4201028297492154	1				NaN	NaN	0	NaN	5537	4303	9838
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9843	30.788	NaN	1195.1	30	0	167.57	0.106			+	-1	CKPPPQCQQQ	10	40	607.2767222508521	NaN	0	607.2760620117188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_CKPPPQC(Carbamidomethyl (C))QQQ_	REV__ENSG00000159455|ENST00000368780|LCE2B;REV__ENSG00000163202|ENST00000368787|LCE3D;REV__ENSG00000172155|ENST00000326233|LCE1D;REV__ENSG00000185962|ENST00000335674|LCE3A;REV__ENSG00000186207|ENST00000334269|LCE5A;REV__ENSG00000186226|ENST00000368770|LCE1E;REV__ENSG00000186844|ENST00000335123|LCE1A;REV__ENSG00000187170|ENST00000368777|LCE4A;REV__ENSG00000187173|ENST00000368779|LCE2A;REV__ENSG00000187180|ENST00000368783|LCE2C;REV__ENSG00000187223|ENST00000368784|LCE2D;REV__ENSG00000196734|ENST00000360090|LCE1B;REV__ENSG00000197084|ENST00000607093|LCE1C;REV__ENSG00000240386|ENST00000334371|LCE1F;REV__LCE1A|p.P31Qfs*39|1|0.06|ENSG00000186844|chr1:152827559-152827559|C/-|frameshift_variant;REV__LCE1A|p.T26Lfs*44|1|0.21|ENSG00000186844|chr1:152827544-152827544|C/-|frameshift_variant;REV__LCE2B|p.Q35Sfs*39|1|0.2|ENSG00000159455|chr1:152686943-152686943|C/-|frameshift_variant;REV__LCE2D|p.P17S|1|0.32|ENSG00000187223|chr1:152664154-152664154|C/T|missense_variant;REV__LCE3D|p.G43Afs*12|1|0.36|ENSG00000163202|chr1:152579809-152579809|C/-|frameshift_variant	19.996771675451527	0.4201028297492154	1				NaN	NaN	0	NaN	5538	4303	9838
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9844	30.79	NaN	2284.9	30	0	207.48	0.038	+			40854	SVFDSSSDMEK	11	72	616.2607542805165	1230.506955627833	2	616.2589111328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVFDSSSDMEK_	ENSG00000112297|ENST00000633556|CRYBG1;nc|ENSG00000112297|Q9Y4K1-1|CRYBG1	41.080066990542036	0.5431644350485484	1				NaN	NaN	0	NaN	5539	4303	9838
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9852	30.808	NaN	1343.2	30	0	81.567	0.214	+			18823	ITWARTWW	8	56	560.2896304525123	1118.5647079718244	2	560.2900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ITWARTWW_	chr7:150859048-150860943|112|16.58|1.0|4.06|+|1|AOC1,AOC1|1	31.954861631926434	0.7126016770032289	1				NaN	NaN	0	NaN	5544	4306	9851
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9853	30.811	NaN	1501.3	30	0	214.76	0.106	+			18896	IVLMAEALE	9	60	494.7743640422377	987.5341751512755	2	494.7739562988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IVLMAEALE_	ENSG00000141867|ENST00000679869|BRD4;nc|ENSG00000141867|O60885-2|BRD4;nc|ENSG00000141867|O60885-3|BRD4	50.0245360154114	0.3026755932229825	1				NaN	NaN	0	NaN	5545	4306	9851
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9854	30.813	NaN	1083.9	30	0	140.27	0.036				-1	HPNGLQVMY	9	45	537.7543334960938	NaN	0	537.7543334960938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_HPNGLQVM(Oxidation (M))Y_	ENSG00000135775|ENST00000366669|COG2;ENST00000494371.5_1_1:230807261-230814859:+|nuORF;nc|ENSG00000135775|Q14746-2|COG2	24.20275056022122	0.35506675290109213	1				NaN	NaN	0	NaN	5546	4306	9851
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9861	30.831	NaN	1201.3	30	0	352.85	0.214				-1	 	0	49	460.25398335713624	459.24670689053625	1	460.25335693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	5550	4309	9860
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9862	30.835	NaN	2380.8	30	0	177.12	0.106			+	11316	FLAASGTVQI	10	62	503.78240014357766	1005.5502473539553	2	503.78204345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FLAASGTVQI_	REV__ENSG00000160445|ENST00000291900|ZER1	49.536043120802724	0.461275219792494	1				NaN	NaN	0	NaN	5551	4309	9860
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9863	30.837	NaN	1322.4	30	0	170.14	0.106	+			5718	AVFLGLARK	9	47	487.8106100569952	973.6066671807904	2	487.8107604980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVFLGLARK_	ENSG00000160752|ENST00000368356|FDPS;ENST00000489324.1_1_1:155289446-155290397:+|nuORF;nc|ENSG00000160752|P14324-2|FDPS	31.954861631926434	0.5046124803899898	1				NaN	NaN	0	NaN	5552	4309	9860
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9864	30.839	NaN	2138.7	30	0	208.11	0.106	+			36079	SEKDSVVSL	9	63	482.253062859493	962.491572785786	2	482.2535400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SEKDSVVSL_	ENSG00000151304|ENST00000339397|SRFBP1;SRFBP1|p.N236Kfs*5|4|0.26|ENSG00000151304|chr5:122020434-122020435|-/A|frameshift_variant;SRFBP1|p.P207H|1|0.31|ENSG00000151304|chr5:122020355-122020355|C/A|missense_variant;SRFBP1|p.Y270Lfs*8|1|0.12|ENSG00000151304|chr5:122020539-122020540|-/T|frameshift_variant	54.722347961057174	0.257609425301511	1				NaN	NaN	0	NaN	5553	4309	9860
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9865	30.84	NaN	1519.9	30	0	124.37	0.106			+	-1	SAFTRRVM	8	49	492.25723514044824	NaN	0	492.25634765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_SAFTRRVM(Oxidation (M))_	REV__ENSG00000133454|ENST00000335473|MYO18B;REV__MYO18B|p.I1502Ffs*3|1|0.09|ENSG00000133454|chr22:25891370-25891370|A/-|frameshift_variant;REV__MYO18B|p.K1556Sfs*19|1|0.16|ENSG00000133454|chr22:25895276-25895276|A/-|frameshift_variant;REV__nc|ENSG00000133454|Q8IUG5-2|MYO18B;REV__nc|ENSG00000133454|Q8IUG5-3|MYO18B	29.14955571784316	1.7418937515398478	1				NaN	NaN	0	NaN	5554	4309	9860
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9866	30.842	NaN	1442.9	30	0	113.67	0.04			+	32980	REEEKSINEKK	11	50	695.3678588867188	NaN	0	695.3678588867188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_REEEKSINEKK_	REV__ENSG00000131269|ENST00000373394|ABCB7;REV__nc|ENSG00000131269|O75027-2|ABCB7;REV__nc|ENSG00000131269|O75027-3|ABCB7	16.71738777980365	0.456735970842152	1				NaN	NaN	0	NaN	5555	4309	9860
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9871	30.857	NaN	6993.7	30	0	770.75	0.214	+			50426	YACEVTHQGL	10	72	560.7578805035477	1119.5012080738952	2	560.759033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YACEVTHQGL_	nc|ENSG00000211592|P01834|IGKC	146.78539889680295	0.009066311176022962	1				NaN	NaN	0	NaN	5557	4312	9870
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9872	30.86	NaN	2439.2	30	0	283.97	0.106			+	25676	LRFHLTVL	8	47	333.5428711218055	997.6067839656165	3	333.54290771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LRFHLTVL_	REV__ENST00000466883.5_1_7:65439694-65439883:-|nuORF	30.503639358989545	0.7238069182250283	1				NaN	NaN	0	NaN	5558	4312	9870
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9873	30.862	NaN	1314.7	30	0	106.78	0.106	+			49567	VYDTNPAKF	9	54	527.7636734110195	1053.5127938888388	2	527.7643432617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYDTNPAKF_	ENSG00000139433|ENST00000318348|GLTP	85.16082228582465	0.07850854922700509	1				NaN	NaN	0	NaN	5559	4312	9870
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9874	30.864	NaN	1592.1	30	0	170	0.106			+	26723	LVLEGFASLEP	11	53	587.82275390625	NaN	0	587.82275390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LVLEGFASLEP_	REV__ENSG00000090924|ENST00000425673|PLEKHG2;REV__nc|ENSG00000090924|Q9H7P9-2|PLEKHG2;REV__nc|ENSG00000090924|Q9H7P9-3|PLEKHG2;REV__PLEKHG2|p.A1300Pfs*59|1|0.52|ENSG00000090924|chr19:39425028-39425028|G/-|frameshift_variant	41.080066990542036	0.3793850210388171	1				NaN	NaN	0	NaN	5560	4312	9870
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9875	30.866	NaN	2357.3	30	0	330.15	0.038	+			14543	GTEFGGSIYQK	11	60	593.7905053756758	1185.5664578181515	2	593.7908935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTEFGGSIYQK_	ENSG00000078668|ENST00000022615|VDAC3;ENSG00000165637|ENST00000332211|VDAC2;ENSG00000213585|ENST00000265333|VDAC1;ENST00000489906.5_1_5:133308464-133311792:-|nuORF;nc|ENSG00000078668|Q9Y277-2|VDAC3;nc|ENSG00000165637|P45880-1|VDAC2;nc|ENSG00000165637|P45880-2|VDAC2	65.15724298150197	0.2774196309614691	1				NaN	NaN	0	NaN	5561	4312	9870
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9882	30.884	NaN	1093.3	30	0	129.24	0.214	+			50991	YIQEARNCL	9	46	555.2731797842215	1108.531806635243	2	555.2745971679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YIQEARNCL_	ENSG00000143367|ENST00000368849|TUFT1;ENST00000461859.1_1_1:151535003-151537177:+|nuORF;nc|ENSG00000143367|Q9NNX1-2|TUFT1;nc|ENSG00000143367|Q9NNX1-3|TUFT1;TUFT1|p.V176Cfs*59|1|0.36|ENSG00000143367|chr1:151569698-151569707|GACGGTGCAG/-|frameshift_variant	40.77816245573522	0.41113185337114944	1				NaN	NaN	0	NaN	5565	4315	9881
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9883	30.887	NaN	1452.6	30	0	169.83	0.038	+			16349	HELQEKLSPL	10	48	597.3299210460049	1192.6452891588096	2	597.3304443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HELQEKLSPL_	ENSG00000118137|ENST00000236850|APOA1	46.45678178249821	0.4896490706773647	1				NaN	NaN	0	NaN	5566	4315	9881
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9889	30.904	NaN	1772.7	30	0	345.14	0.214			+	-1	CFCPSGRS	8	59	485.69722309503254	969.3798932568651	2	485.6972961425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))FC(Carbamidomethyl (C))PSGRS_	REV__ENSG00000178222|ENST00000433731|RNF212	21.70233525837049	0.7917639344264583	1				NaN	NaN	0	NaN	5569	4318	9888
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9890	30.907	NaN	1222.1	30	0	145.03	0.106			+	11772	FSLKFLKI	8	55	498.3158517594673	NaN	0	498.31634521484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FSLKFLKI_	REV__ENSG00000150261|ENST00000279783|OR8K1;REV__OR8K1|p.N178Ffs*4|1|0.24|ENSG00000150261|chr11:56346569-56346582|AAACATAATCAGCT/-|frameshift_variant	37.15910966729921	1.7418937515398478	1				NaN	NaN	0	NaN	5570	4318	9888
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9891	30.909	NaN	1267.1	30	0	120	0.037			+	-1	LLFDVLLCF	9	50	570.3112160568526	1138.607879180505	2	570.311767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LLFDVLLC(Carbamidomethyl (C))F_	REV__ENSG00000083097|ENST00000349129|DOP1A	25.450171626174864	0.5654022654467333	1				NaN	NaN	0	NaN	5571	4318	9888
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9901	30.931	NaN	3224.1	30	0	300.25	0.214	+			51392	YTNGKCVIL	9	65	534.2818658089685	NaN	0	534.2820434570312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_YTNGKC(Carbamidomethyl (C))VIL_	ENSG00000071127|ENST00000499869|WDR1;ENST00000509600.1_1_4:10117520-10118290:-|nuORF;ENST00000514319.5_1_4:10110004-10118075:-|nuORF;nc|ENSG00000071127|O75083-3|WDR1	64.20726635412375	0.13137488984569443	1				NaN	NaN	0	NaN	5578	4321	9900
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9902	30.935	NaN	3573.6	30	0	680.89	0.035	+			19603	KDFIRPKL	8	66	508.81635736858004	1015.6181618039601	2	508.816162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KDFIRPKL_	ENSG00000133083|ENST00000360631|DCLK1;nc|ENSG00000133083|O15075-2|DCLK1	44.116797842482775	0.6307669463330267	1				NaN	NaN	0	NaN	5579	4321	9900
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9909	30.951	NaN	3784.2	30	0	1526.8	0.214	+			10602	EYLTKVDKL	9	69	554.8157618237209	1107.6169707142417	2	554.8160400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EYLTKVDKL_	ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000141367|Q00610-2|CLTC	112.41091882917199	0.026537921851008135	1				NaN	NaN	0	NaN	5583	4324	9908
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9910	30.955	NaN	2061.1	30	0	505.6	0.106			+	42217	TAAHDDPQQLL	11	50	604.7986425732578	1207.5827322133155	2	604.7988891601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAAHDDPQQLL_	REV__ENSG00000100644|ENST00000337138|HIF1A;REV__nc|ENSG00000100644|Q16665-3|HIF1A	28.081489160057373	0.6952392775027776	1				NaN	NaN	0	NaN	5584	4324	9908
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9911	30.957	NaN	1310.7	30	0	195.41	0.035	+			3761	ATAELIMSR	9	55	496.2657921568161	NaN	0	496.26519775390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATAELIMSR_	ENSG00000105677|ENST00000222284|TMEM147;ENST00000477168.6_1_19:36036641-36037810:+|nuORF;ENST00000595467.1_1_19:36037522-36037810:+|nuORF;nc|ENSG00000105677|Q9BVK8-2|TMEM147	117.81106730687013	0.0026430897281881707	1				NaN	NaN	0	NaN	5585	4324	9908
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9915	30.971	NaN	2756.2	30	0	373.55	0.214	+			49981	WAIDNVYI	8	61	497.2548343373498	992.4951157414996	2	497.25537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WAIDNVYI_	ENSG00000189056|ENST00000428762|RELN;ENSG00000189056|ENST00000428762|RELN;ENSG00000189056|ENST00000428762|RELN;nc|ENSG00000189056|P78509-2|RELN;nc|ENSG00000189056|P78509-2|RELN;nc|ENSG00000189056|P78509-2|RELN;nc|ENSG00000189056|P78509-3|RELN;nc|ENSG00000189056|P78509-3|RELN;nc|ENSG00000189056|P78509-3|RELN;RELN|p.C2194Lfs*11|1|0.06|ENSG00000189056|chr7:103542822-103542823|-/TCGTAATGTATAATAG|frameshift_variant;RELN|p.C2194Lfs*11|1|0.06|ENSG00000189056|chr7:103542822-103542823|-/TCGTAATGTATAATAG|frameshift_variant;RELN|p.H3353Tfs*46|1|0.25|ENSG00000189056|chr7:103483777-103483777|G/-|frameshift_variant;RELN|p.H3353Tfs*46|1|0.25|ENSG00000189056|chr7:103483777-103483777|G/-|frameshift_variant;RELN|p.H3353Tfs*46|1|0.25|ENSG00000189056|chr7:103483777-103483777|G/-|frameshift_variant	57.81127852772723	0.5234495074909924	1				NaN	NaN	0	NaN	5586	4327	9914
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9916	30.974	NaN	816.3	30	0	149.02	0.106			+	31112	QFSLTQTL	8	40	469.25333541217464	NaN	0	469.2537841796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QFSLTQTL_	REV__ENSG00000152292|ENST00000469800|SH2D6	24.519189625965996	1.7418937515398478	1				NaN	NaN	0	NaN	5587	4327	9914
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9917	30.976	NaN	2355.8	30	0	243.72	0.035	+			47595	VRRAGAVRH	9	66	511.3103147603918	1020.6060765875836	2	511.3104248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VRRAGAVRH_	ENST00000332783.11_1_15:101142769-101143240:+|nuORF	44.116797842482775	0.37197099687881774	1				NaN	NaN	0	NaN	5588	4327	9914
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9926	30.996	NaN	1882	30	0	178.91	0.215	+			43272	TFEYLQSF	8	53	517.7435131244396	NaN	0	517.7431030273438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TFEYLQSF_	ENSG00000000938|ENST00000374005|FGR;ENSG00000010810|ENST00000354650|FYN;ENST00000491885.6_1_6:111982944-111997736:-|nuORF;nc|ENSG00000010810|P06241-2|FYN;nc|ENSG00000010810|P06241-3|FYN	65.80317337860623	1.7418937515398478	1				NaN	NaN	0	NaN	5594	4330	9925
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9927	31	NaN	1263.9	30	0	326.9	0.106	+			1636	AGNKPANAVL	10	47	477.77180367278476	953.5290544123695	2	477.772216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AGNKPANAVL_	CHD5|p.P1887Rfs*14|1|0.5|ENSG00000116254|chr1:6106698-6106698|G/-|frameshift_variant;ENSG00000111642|ENST00000544040|CHD4;ENSG00000116254|ENST00000262450|CHD5;ENSG00000170004|ENST00000330494|CHD3;ENST00000470531.5_3_17:7807732-7814900:+|nuORF;nc|ENSG00000111642|Q14839-2|CHD4;nc|ENSG00000170004|Q12873-2|CHD3;nc|ENSG00000170004|Q12873-3|CHD3	34.172542307311794	0.6007644933930345	1				NaN	NaN	0	NaN	5595	4330	9925
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9928	31.002	NaN	843.62	30	0	117.5	0.035				-1	VMCEIIVF	8	46	513.7523803710938	NaN	0	513.7523803710938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_VM(Oxidation (M))C(Carbamidomethyl (C))EIIVF_	ENST00000610036.1_1_2:105953583-105953844:-|nuORF	28.2542754592877	1.7418937515398478	1				NaN	NaN	0	NaN	5596	4330	9925
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9936	31.022	NaN	1606.4	30	0	178.2	0.214				-1	TPLMFQRM	8	53	528.2549942713507	1054.4954356095013	2	528.2562255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_TPLM(Oxidation (M))FQRM(Oxidation (M))_	CACNA1A|p.P2221Rfs*45|1|0.48|ENSG00000141837|chr19:13208879-13208879|A/-|frameshift_variant;ENSG00000141837|ENST00000360228|CACNA1A;nc|ENSG00000141837|O00555-2|CACNA1A;nc|ENSG00000141837|O00555-3|CACNA1A;nc|ENSG00000141837|O00555-4|CACNA1A;nc|ENSG00000141837|O00555-5|CACNA1A;nc|ENSG00000141837|O00555-6|CACNA1A	25.450171626174864	0.7628259754767981	1				NaN	NaN	0	NaN	5601	4333	9935
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9937	31.025	NaN	1521.8	30	0	247.25	0.106	+			13600	GLVRGSFR	8	48	446.2604822763311	NaN	0	446.2605285644531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GLVRGSFR_	ENSG00000278803|ENST00000458091|PWWP4	37.15910966729921	1.7418937515398478	1				NaN	NaN	0	NaN	5602	4333	9935
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9938	31.027	NaN	2238.4	30	0	325.25	0.106			+	30117	PRPSATHGRG	10	63	518.2773645971432	1034.5401762610863	2	518.2775268554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PRPSATHGRG_	REV__ENST00000566525.5_1_16:770887-771532:+|nuORF	36.446750945000026	0.5818864909973037	1				NaN	NaN	0	NaN	5603	4333	9935
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9939	31.029	NaN	2452.8	30	0	485.73	0.04			+	-1	YPCSFYLLPVL	11	57	686.3535504471974	1370.6925479611948	2	686.3543701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_YPC(Carbamidomethyl (C))SFYLLPVL_	REV__ENSG00000164944|ENST00000297591|VIRMA;REV__nc|ENSG00000164944|Q69YN4-2|VIRMA;REV__nc|ENSG00000164944|Q69YN4-3|VIRMA;REV__nc|ENSG00000164944|Q69YN4-4|VIRMA	19.996771675451527	0.7768568223548057	1				NaN	NaN	0	NaN	5604	4333	9935
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9948	31.049	NaN	4838.1	30	0	445.8	0.214	+			36826	SIFDGRVVAK	10	68	546.3134068199103	1090.6122607066204	2	546.3136596679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIFDGRVVAK_	ENSG00000143183|ENST00000367881|TMCO1;nc|ENSG00000143183|Q9UM00-2|TMCO1;nc|ENSG00000143183|Q9UM00|TMCO1	79.48907831485694	0.19979514868675113	1				NaN	NaN	0	NaN	5610	4336	9947
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9949	31.053	NaN	2205.4	30	0	306.18	0.106	+			9788	ENSVQDFKI	9	66	540.2713790446818	1078.5282051561635	2	540.7713012695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ENSVQDFKI_	ENSG00000077254|ENST00000370794|USP33;nc|ENSG00000077254|Q8TEY7-3|USP33;nc|ENSG00000077254|Q8TEY7|USP33;USP33|p.I935Lfs*3|1|0.1|ENSG00000077254|chr1:77697343-77697343|T/-|frameshift_variant	69.6276240434122	0.14239879520340665	1				NaN	NaN	0	NaN	5611	4336	9947
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9950	31.055	NaN	1698.2	30	0	616.2	0.106	+			24506	LGKAKPLA	8	44	399.26578808466695	796.5170232361339	2	399.2658386230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LGKAKPLA_	ENST00000432223.2_1_11:73141522-73179519:-|nuORF	20.481830146152948	0.8005983782650069	1				NaN	NaN	0	NaN	5612	4336	9947
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9951	31.056	NaN	968.75	30	0	85.51	0.106			+	26700	LVICGHCIM	9	47	494.7415083818493	987.4684638304986	2	494.7419738769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LVICGHCIM_	REV__APC|p.E1576Kfs*74|1|0.61|ENSG00000134982|chr5:112840319-112840319|A/-|frameshift_variant;REV__APC|p.I1580Lfs*69|1|0.59|ENSG00000134982|chr5:112840330-112840333|TTAT/-|frameshift_variant;REV__APC|p.S1581Lfs*69|1|0.34|ENSG00000134982|chr5:112840333-112840333|T/-|frameshift_variant	39.021493756699265	0.43173687394350213	1				NaN	NaN	0	NaN	5613	4336	9947
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9952	31.058	NaN	2056.3	30	0	367.83	0.035			+	25105	LLPPIDSRP	9	45	336.5341396426809	1006.5805895282426	3	336.533935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LLPPIDSRP_	REV__ENSG00000110427|ENST00000658780|KIAA1549L;REV__KIAA1549L|p.T1376Hfs*62|1|0.19|ENSG00000110427|chr11:33606771-33606772|-/C|frameshift_variant;REV__KIAA1549L|p.T1376Pfs*16|1|0.38|ENSG00000110427|chr11:33606772-33606772|C/-|frameshift_variant	24.20275056022122	0.577060078256802	1				NaN	NaN	0	NaN	5614	4336	9947
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9959	31.075	NaN	2651.7	30	0	255.74	0.212				-1	LWLLTNSKPCA	11	73	651.8482753620509	1301.6819977909017	2	651.8487548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_LWLLTNSKPC(Carbamidomethyl (C))A_	ANKIB1|p.F544Lfs*6|1|0.33|ENSG00000001629|chr7:92386521-92386522|TT/-|frameshift_variant;ENSG00000001629|ENST00000265742|ANKIB1	30.317721548370564	0.6717830234747728	1				NaN	NaN	0	NaN	5618	4339	9958
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9960	31.078	NaN	1436.8	30	0	139.94	0.106	+			45564	TYMGHTGAVW	10	61	569.752868209728	1137.491183486256	2	569.7542724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_TYM(Oxidation (M))GHTGAVW_	ENSG00000084623|ENST00000677711|EIF3I;ENST00000474371.1_1_1:32688150-32694122:+|nuORF;ENST00000489353.5_1_1:32688042-32691823:+|nuORF	49.44154591367651	0.46214596422418036	1				NaN	NaN	0	NaN	5619	4339	9958
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9961	31.08	NaN	1785.1	30	0	158.31	0.038	+			51550	YYEEQHPEL	9	53	604.2672522233972	1206.5199515135944	2	604.2679443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YYEEQHPEL_	ENSG00000008517|ENST00000525643|IL32;nc|ENSG00000008517|P24001-3|IL32;nc|ENSG00000008517|P24001-4|IL32;nc|ENSG00000008517|P24001-5|IL32;nc|ENSG00000008517|P24001-6|IL32;nc|ENSG00000008517|P24001|IL32	75.04331003522576	0.118981335847003	1				NaN	NaN	0	NaN	5620	4339	9958
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9970	31.1	NaN	4320.5	30	0	546.25	0.214	+			26983	LYMKNGQGF	9	69	529.2600106084741	1056.505468283748	2	529.2607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LYMKNGQGF_	ENSG00000116473|ENST00000369709|RAP1A;ENSG00000127314|ENST00000250559|RAP1B;ENST00000494982.1_1_1:112233982-112249293:+|nuORF;nc|ENSG00000127314|P61224-3|RAP1B;nc|ENSG00000127314|P61224-4|RAP1B;nc|ENSG00000254893|A6NIZ1|RAP1BL	76.84663266511073	0.11118375776443899	1				NaN	NaN	0	NaN	5626	4342	9969
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9971	31.104	NaN	3146.9	30	0	531.77	0.106	+			23516	LAHLGSTL	8	50	406.237369970879	810.460187008558	2	406.23712158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LAHLGSTL_	ENSG00000167595|ENST00000646935|PROSER3	74.51659920185547	0.36926395944126233	1				NaN	NaN	0	NaN	5627	4342	9969
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9972	31.106	NaN	2408.4	30	0	340.31	0.106	+			40288	STSSHCLLY	9	56	534.2450320418318	1066.4755111504635	2	534.746337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_STSSHC(Carbamidomethyl (C))LLY_	ENSG00000236287|ENST00000413761|ZBED5;ZBED5|p.N390Mfs*3|1|0.09|ENSG00000236287|chr11:10853777-10853777|T/-|frameshift_variant	47.91560031466742	0.327412564698279	1				NaN	NaN	0	NaN	5628	4342	9969
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9973	31.108	NaN	1659	30	0	213.51	0.106	+			11408	FLQEHNTTL	9	59	551.779755999782	1101.5449590663638	2	551.7811889648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FLQEHNTTL_	CCDC88C|p.K1383Sfs*29|1|0.08|ENSG00000015133|chr14:91291049-91291049|T/-|frameshift_variant;ENSG00000015133|ENST00000389857|CCDC88C	59.93077597824379	0.21419174904018318	1				NaN	NaN	0	NaN	5629	4342	9969
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9974	31.109	NaN	3818.3	30	0	1389.4	0.036			+	-1	FVMLVMLAL	9	63	526.7965452090629	1051.5785374849256	2	526.7985229492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_FVM(Oxidation (M))LVMLAL_	REV__ENST00000374866.7_1_2:189917503-189917647:-|nuORF	39.021493756699265	0.43173687394350213	1				NaN	NaN	0	NaN	5630	4342	9969
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9980	31.125	NaN	2320.3	30	0	237.72	0.214				-1	TLRCPVML	8	60	503.26655414383634	1004.5185553544727	2	503.2665710449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_TLRC(Carbamidomethyl (C))PVM(Oxidation (M))L_	ENSG00000103034|ENST00000570248|NDRG4;ENSG00000165795|ENST00000556147|NDRG2;ENST00000556716.5_1_14:21486897-21488105:-|nuORF;ENST00000557416.5_1_14:21486655-21488105:-|nuORF;nc|ENSG00000103034|Q9ULP0-2|NDRG4;nc|ENSG00000103034|Q9ULP0-3|NDRG4;nc|ENSG00000103034|Q9ULP0-4|NDRG4;nc|ENSG00000103034|Q9ULP0-5|NDRG4;nc|ENSG00000103034|Q9ULP0-6|NDRG4;nc|ENSG00000103034|Q9ULP0-7|NDRG4;nc|ENSG00000103034|Q9ULP0-8|NDRG4;nc|ENSG00000165795|Q9UN36-2|NDRG2;nc|ENSG00000165795|Q9UN36-3|NDRG2;nc|ENSG00000165795|Q9UN36-4|NDRG2;nc|ENSG00000165795|Q9UN36-5|NDRG2;nc|ENSG00000165795|Q9UN36-6|NDRG2	60.29395666154354	0.49887135096048313	1				NaN	NaN	0	NaN	5633	4345	9979
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9981	31.129	NaN	2127.9	30	0	222.17	0.106	+			13726	GQAGIPVLPFQ	11	66	563.8171836149306	NaN	0	563.81640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GQAGIPVLPFQ_	ENST00000533581.1_1_1:31658018-31661124:-|nuORF	48.601550744091256	0.32536291591840966	1				NaN	NaN	0	NaN	5634	4345	9979
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9982	31.131	NaN	2826.4	30	0	243.15	0.106	+			19430	KAPVTVTSL	9	55	458.2791570439821	914.5437611547642	2	458.2781982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KAPVTVTSL_	ENSG00000172534|ENST00000310441|HCFC1;HCFC1|p.L913Wfs*11|1|0.39|ENSG00000172534|chrX:153956309-153956309|A/-|frameshift_variant;HCFC1|p.P1894Lfs*22|1|0.06|ENSG00000172534|chrX:153950835-153950835|G/-|frameshift_variant;nc|ENSG00000172534|P51610-2|HCFC1;nc|ENSG00000172534|P51610-4|HCFC1	75.04331003522576	0.118981335847003	1				NaN	NaN	0	NaN	5635	4345	9979
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9983	31.133	NaN	1429.1	30	0	138.16	0.035	+			30347	PTVQYPLEV	9	60	523.2802284612352	1044.5459039892703	2	523.2796630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PTVQYPLEV_	ENSG00000198677|ENST00000358746|SKIC3;ENST00000503279.1_1_5:94864675-94872608:-|nuORF;ENST00000515207.1_1_5:94872443-94877598:-|nuORF	71.87747018426188	0.13267044672804276	1				NaN	NaN	0	NaN	5636	4345	9979
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9992	31.154	NaN	5227.1	30	0	899.77	0.214	+			28357	NEKQISQVL	9	67	529.7958154693055	1057.5770780054108	2	529.7962036132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NEKQISQVL_	ARHGAP35|p.F938Lfs*10|1|0.18|ENSG00000160007|chr19:46921484-46921484|T/-|frameshift_variant;ARHGAP35|p.K945Rfs*3|1|0.4|ENSG00000160007|chr19:46921503-46921503|A/-|frameshift_variant;ARHGAP35|p.Y859Ifs*28|1|0.09|ENSG00000160007|chr19:46921245-46921245|T/-|frameshift_variant;ENSG00000160007|ENST00000672722|ARHGAP35	58.2462437865262	0.22823408064396822	1				NaN	NaN	0	NaN	5642	4348	9991
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9993	31.158	NaN	8357.7	30	0	1459.9	0.106			+	28643	NLFVSLGKSR	10	85	560.8270090548127	1119.6394651764253	2	560.8277587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NLFVSLGKSR_	REV__ENSG00000136235|ENST00000258733|GPNMB;REV__ENST00000463011.5_1_7:23312740-23313840:+|nuORF;REV__ENST00000478451.1_1_7:23312974-23313840:+|nuORF;REV__nc|ENSG00000136235|Q14956|GPNMB	37.81151784470057	0.569310847604193	1				NaN	NaN	0	NaN	5643	4348	9991
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9994	31.16	NaN	3001.9	30	0	336.94	0.106	+			12785	GELTGEVRM	9	54	496.24748121293453	NaN	0	496.24761962890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GELTGEVRM_	ENSG00000128591|ENST00000325888|FLNC;FLNC|p.H2471Tfs*58|1|0.18|ENSG00000128591|chr7:128856767-128856767|C/-|frameshift_variant;FLNC|p.V1896Wfs*57|1|0.04|ENSG00000128591|chr7:128851472-128851472|G/-|frameshift_variant;nc|ENSG00000128591|Q14315-2|FLNC	70.8162118820467	0.10318768208603292	1				NaN	NaN	0	NaN	5644	4348	9991
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9995	31.162	NaN	3131.3	30	0	1066.1	0.106	+			13895	GRGETYPCVY	10	56	572.7581668375914	1143.5017807419827	2	572.7583618164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GRGETYPCVY_	ENST00000517517.1_1_8:103244498-103250973:-|nuORF	27.882242232435846	0.6521336255503853	1				NaN	NaN	0	NaN	5645	4348	9991
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9996	31.164	NaN	2690	30	0	288.87	0.106	+			4457	ATINNPNLLTK	11	72	599.8434582096716	1197.672363486143	2	600.3450317382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATINNPNLLTK_	DDX60L|p.A1208Vfs*33|1|0.16|ENSG00000181381|chr4:168395993-168395994|-/CTTTGACA|frameshift_variant;DDX60L|p.F1291Lfs*11|1|0.38|ENSG00000181381|chr4:168391582-168391582|A/-|frameshift_variant;DDX60L|p.N1040Kfs*4|1|0.03|ENSG00000181381|chr4:168406043-168406044|-/AT|frameshift_variant;DDX60L|p.N1168Tfs*25|2|0.3|ENSG00000181381|chr4:168396113-168396113|T/-|frameshift_variant;DDX60L|p.N1642Mfs*9|1|0.2|ENSG00000181381|chr4:168371615-168371615|T/-|frameshift_variant;DDX60L|p.R1122Efs*29|1|0.05|ENSG00000181381|chr4:168400953-168400953|T/-|frameshift_variant;ENSG00000181381|ENST00000682922|DDX60L;nc|ENSG00000181381|Q5H9U9-2|DDX60L	60.1669710687717	0.32196467475348695	1				NaN	NaN	0	NaN	5646	4348	9991
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9997	31.165	NaN	3548	30	0	665.34	0.106	+			11000	FEHCNFNDVT	10	69	641.7614246011888	1281.5082962691774	2	641.7620239257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_FEHC(Carbamidomethyl (C))NFNDVT_	ENSG00000085063|ENST00000642928|CD59;nc|ENSG00000284969|P13987-2|CD59	66.9202029811203	0.3029018092171124	1				NaN	NaN	0	NaN	5647	4348	9991
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	9998	31.167	NaN	809.87	30	0	133.74	0.035	+			30681	QCHFQPLL	8	46	493.2513227936023	NaN	0	493.25152587890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QCHFQPLL_	USP53|p.R338Q|1|0.4|ENSG00000145390|chr4:119267360-119267360|G/A|missense_variant	26.79610172149135	1.7418937515398478	1				NaN	NaN	0	NaN	5648	4348	9991
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10005	31.185	NaN	3217.1	30	0	1023.2	0.214	+			23273	KYLEETNSL	9	53	548.7794154524848	1095.5442779717696	2	548.7803344726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KYLEETNSL_	ENSG00000198945|ENST00000361794|L3MBTL3;L3MBTL3|p.M479*|1|0.26|ENSG00000198945|chr6:130086161-130086161|A/-|frameshift_variant;nc|ENSG00000198945|Q96JM7-2|L3MBTL3	58.62960593111931	0.22503835759089574	1				NaN	NaN	0	NaN	5652	4351	10004
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10006	31.189	NaN	2242.4	30	0	897.77	0.106	+			11991	FVSCLPQL	8	52	482.2531954301437	962.4918379270874	2	482.2533874511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_FVSC(Carbamidomethyl (C))LPQL_	ENST00000579147.5_1_17:61906826-61909326:+|nuORF;ENST00000581764.1_1_17:61906826-61907063:+|nuORF	57.81127852772723	0.5234495074909924	1				NaN	NaN	0	NaN	5653	4351	10004
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10007	31.191	NaN	1559.6	30	0	300.97	0.035	+			19020	IWKDDCLL	8	55	503.25946158463523	NaN	0	503.25927734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IWKDDCLL_	ENSG00000081014|ENST00000261842|AP4E1;ENST00000561397.1_1_15:51289960-51293240:+|nuORF;nc|ENSG00000081014|Q9UPM8-2|AP4E1	68.484700416344	1.7418937515398478	1				NaN	NaN	0	NaN	5654	4351	10004
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10014	31.209	NaN	3836.9	30	0	826.18	0.214	+			14373	GTAGNGWFNK	10	59	526.2518495996482	1050.4891462660962	2	526.2521362304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTAGNGWFNK_	ENST00000525241.1_1_11:35211476-35226207:+|nuORF;ENST00000534296.5_1_11:35211476-35226207:+|nuORF	90.36981228632155	0.12895663264417576	1				NaN	NaN	0	NaN	5658	4354	10013
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10015	31.212	NaN	790.77	30	0	77.056	0.106	+			31347	QITDNGAVL	9	35	465.74801655925455	NaN	0	465.7479553222656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QITDNGAVL_	LGALS9C|p.V33D|1|0.54|ENSG00000171916|chr17:18483933-18483933|T/A|missense_variant	47.657333605630114	0.2228375344433429	1				NaN	NaN	0	NaN	5659	4354	10013
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10016	31.214	NaN	905.34	30	0	125.45	0.106	+			12746	GELANEVKV	9	46	479.7637939453125	NaN	0	479.7637939453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GELANEVKV_	ENSG00000100345|ENST00000216181|MYH9;SYNDIG1-MYH9|1|fusion	40.05817265558897	0.275207446262312	1				NaN	NaN	0	NaN	5660	4354	10013
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10017	31.216	NaN	1370.6	30	0	179.54	0.034	+			27064	MAELGLEIP	9	48	486.7588788981596	NaN	0	486.7600402832031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MAELGLEIP_	ENSG00000187531|ENST00000328666|SIRT7;ENST00000572976.5_1_17:79870294-79872532:-|nuORF;ENST00000574153.1_1_17:79871648-79872097:-|nuORF;ENST00000574992.5_1_17:79871648-79872373:-|nuORF;nc|ENSG00000187531|Q9NRC8-3|SIRT7;SIRT7|p.A332T|1|0.07|ENSG00000187531|chr17:81913784-81913784|C/T|missense_variant	37.15910966729921	0.2899585034171616	1				NaN	NaN	0	NaN	5661	4354	10013
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10024	31.233	NaN	8241.5	30	0	720.94	0.214	+			34786	RYLEGTSCI	9	74	549.7659095984526	1097.517266263705	2	549.766357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_RYLEGTSC(Carbamidomethyl (C))I_	ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1	82.7504851949679	0.08565546331141553	1				NaN	NaN	0	NaN	5665	4357	10023
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10025	31.236	NaN	5998.8	30	0	1097.5	0.106	+			35404	SAQSFFENK	9	67	529.2523998764977	1056.4902468197954	2	529.2518920898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAQSFFENK_	ENSG00000136758|ENST00000376016|YME1L1;nc|ENSG00000136758|Q96TA2-3|YME1L1;nc|ENSG00000136758|Q96TA2|YME1L1;YME1L1|p.N311Tfs*18|1|0.26|ENSG00000136758|chr10:27134053-27134053|T/-|frameshift_variant	142.36107225718385	0.009372392051035914	1				NaN	NaN	0	NaN	5666	4357	10023
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10026	31.238	NaN	3584.1	30	0	311.23	0.106	+			50427	YACEVTHQGL	10	79	560.7578805035477	1119.5012080738952	2	560.7594604492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YACEVTHQGL_	nc|ENSG00000211592|P01834|IGKC	77.31757898189308	0.2175361111083648	1				NaN	NaN	0	NaN	5667	4357	10023
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10027	31.24	NaN	1724.8	30	0	275.42	0.036				-1	PSPLLDMKF	9	53	532.2788159440368	NaN	0	532.2808837890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_PSPLLDM(Oxidation (M))KF_	ENST00000338513.1_1_1:35220669-35222948:+|nuORF	40.77816245573522	0.2702456086868081	1				NaN	NaN	0	NaN	5668	4357	10023
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10037	31.262	NaN	2069	30	0	183.2	0.214	+			104	AAEEGLREL	9	59	494.257480290552	986.500407647904	2	494.25799560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAEEGLREL_	ENSG00000167657|ENST00000545797|DAPK3;ENST00000595279.1_1_19:3959101-3961233:-|nuORF	46.45678178249821	0.34452392205506005	1				NaN	NaN	0	NaN	5675	4360	10036
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10038	31.265	NaN	1209.5	30	0	218.22	0.038			+	29819	PKNYINCNTF	10	37	607.2854773117654	1212.5564016903306	2	607.2843017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PKNYINCNTF_	REV__BRD3|p.Y113N|1|0.39|ENSG00000169925|chr9:134052320-134052320|A/T|missense_variant	25.125986553469783	0.6746423231557295	1				NaN	NaN	0	NaN	5676	4360	10036
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10043	31.28	NaN	2454.9	30	0	179.96	0.214	+			50428	YACEVTHQGL	10	67	560.7578805035477	1119.5012080738952	2	561.2651977539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YACEVTHQGL_	nc|ENSG00000211592|P01834|IGKC	45.97224482568171	0.49411383603842696	1				NaN	NaN	0	NaN	5678	4363	10042
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10044	31.284	NaN	1446	30	0	437.35	0.033				-1	 	0	30	435.19545723128675	868.3763615293735	2	435.1956787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	5679	4363	10042
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10053	31.304	NaN	1182.1	30	0	140.85	0.145			+	-1	ILYKKWCM	8	53	563.7953899247307	NaN	0	563.7958374023438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))ILYKKWCM_	REV__CD2|p.N116Mfs*9|1|0.15|ENSG00000116824|chr1:116754911-116754911|A/-|frameshift_variant	28.2542754592877	1.7418937515398478	1				NaN	NaN	0	NaN	5685	4366	10052
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10058	31.32	NaN	2164.4	30	0	203.21	0.214	+			25193	LMGLWSVAL	9	57	495.2793046079512	988.5440562827024	2	495.2793884277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LMGLWSVAL_	WDFY3|p.L1060Cfs*41|1|0.4|ENSG00000163625|chr4:84794968-84794968|A/-|frameshift_variant	40.5726180659479	0.4135428067754104	1				NaN	NaN	0	NaN	5687	4369	10057
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10059	31.324	NaN	1599	30	0	152.17	0.106			+	7564	DIESKVQTL	9	56	516.7828351791433	1031.5511174250864	2	516.783447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DIESKVQTL_	REV__ENSG00000109063|ENST00000583535|MYH3	62.107414245175825	0.1960472003779324	1				NaN	NaN	0	NaN	5688	4369	10057
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10060	31.326	NaN	911.33	30	0	104.43	0.106	+			27308	MGVGHYTAY	9	51	499.7230708977577	NaN	0	499.72332763671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MGVGHYTAY_	ARL8B-USP4|1|fusion;ENSG00000114316|ENST00000265560|USP4;ENST00000485450.5_1_3:49315728-49349110:-|nuORF;nc|ENSG00000114316|Q13107-2|USP4;USP4|p.A886V|1|0.12|ENSG00000114316|chr3:49278890-49278890|G/A|missense_variant	40.5726180659479	0.27166212580479165	1				NaN	NaN	0	NaN	5689	4369	10057
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10061	31.328	NaN	1110	30	0	127.06	0.106	+			11587	FPQQPSVKA	9	54	501.2747269699357	NaN	0	501.2749328613281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FPQQPSVKA_	ENSG00000205038|ENST00000378402|PKHD1L1	45.97224482568171	0.23445038899310136	1				NaN	NaN	0	NaN	5690	4369	10057
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10062	31.329	NaN	765.46	30	0	65.31	0.034			+	47243	VMPLSSNHG	9	35	471.2299499511719	NaN	0	471.2299499511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VMPLSSNHG_	REV__ENSG00000198887|ENST00000361138|SMC5;REV__SMC5|p.F947Lfs*40|1|0.1|ENSG00000198887|chr9:70347984-70347984|T/-|frameshift_variant	23.04248740728303	0.3589936788096251	1				NaN	NaN	0	NaN	5691	4369	10057
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10072	31.353	NaN	17418	30	0	2456.4	0.214	+			37062	SISDKFFQK	9	74	550.2925075703098	1098.5704622074195	2	550.2936401367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SISDKFFQK_	ENSG00000089472|ENST00000343002|HEPH;HEPH|p.R1086Qfs*4|1|0.29|ENSG00000089472|chrX:66266444-66266445|-/C|frameshift_variant;nc|ENSG00000089472|Q9BQS7-2|HEPH;nc|ENSG00000089472|Q9BQS7-3|HEPH;nc|ENSG00000089472|Q9BQS7-4|HEPH	101.25262130126117	0.03792372629710479	1				NaN	NaN	0	NaN	5698	4372	10071
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10073	31.356	NaN	4297.9	30	0	2466.8	0.106				-1	 	0	51	350.2067294564005	698.3989059796011	2	350.20672607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	5699	4372	10071
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10074	31.358	NaN	4608	30	0	402.1	0.106	+			35691	SDIQVKEL	8	57	466.2583817971636	930.5022106611273	2	466.2582092285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SDIQVKEL_	ENSG00000117632|ENST00000455785|STMN1;ENST00000465604.1_1_1:26229981-26231212:-|nuORF;nc|ENSG00000117632|P16949-2|STMN1	70.8162118820467	0.40009732720503505	1				NaN	NaN	0	NaN	5700	4372	10071
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10075	31.36	NaN	3453.7	30	0	353.17	0.106	+			3556	ASTLTYHVRR	10	68	602.3328812062912	1202.6512094793823	2	602.3330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASTLTYHVRR_	ENSG00000085274|ENST00000349841|MYNN;nc|ENSG00000085274|Q9NPC7-2|MYNN;nc|ENSG00000085274|Q9NPC7-3|MYNN	82.24051045832904	0.17731618517892733	1				NaN	NaN	0	NaN	5701	4372	10071
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10076	31.362	NaN	1283	30	0	149.02	0.035			+	-1	SNCTGTLGVR	10	51	525.2577612843912	1048.5009696355824	2	525.2579956054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SNCTGTLGVR_	REV__ENST00000446607.1_1_1:236274160-236274493:+|nuORF	32.75053402867276	0.6123771875927935	1				NaN	NaN	0	NaN	5702	4372	10071
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10084	31.382	NaN	18440	30	0	2257.5	0.144	+			37063	SISDKFFQK	9	80	550.2925075703098	1098.5704622074195	2	551.2962036132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SISDKFFQK_	ENSG00000089472|ENST00000343002|HEPH;HEPH|p.R1086Qfs*4|1|0.29|ENSG00000089472|chrX:66266444-66266445|-/C|frameshift_variant;nc|ENSG00000089472|Q9BQS7-2|HEPH;nc|ENSG00000089472|Q9BQS7-3|HEPH;nc|ENSG00000089472|Q9BQS7-4|HEPH	90.60085204095205	0.06317133949006545	1				NaN	NaN	0	NaN	5707	4375	10083
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10092	31.403	NaN	2026.9	30	0	416.27	0.214			+	46689	VGIGVHAELI	10	47	336.53422005736184	1006.5808307722855	3	336.53472900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VGIGVHAELI_	REV__ENSG00000068650|ENST00000375645|ATP11A	25.450171626174864	0.6719948968573018	1				NaN	NaN	0	NaN	5712	4378	10091
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10093	31.407	NaN	1212.6	30	0	195.32	0.106	+			2232	ALSNPILNK	9	50	485.28979217205756	968.5650314109151	2	485.2896423339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ALSNPILNK_	ENSG00000132436|ENST00000433017|FIGNL1;FIGNL1|p.K309Sfs*16|2|0.21|ENSG00000132436|chr7:50446362-50446362|T/-|frameshift_variant;nc|ENSG00000132436|Q6PIW4-2|FIGNL1	68.78682469695295	0.14603441672067394	1				NaN	NaN	0	NaN	5713	4378	10091
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10094	31.409	NaN	1807.7	30	0	296.97	0.106	+			4901	ATQILSVPK	9	50	478.79211807300857	955.5696832128172	2	478.7923583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATQILSVPK_	nc|ENSG00000120802|P42166|TMPO	90.60085204095205	0.06317133949006545	1				NaN	NaN	0	NaN	5714	4378	10091
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10095	31.411	NaN	1683.1	30	0	239.59	0.106	+			17859	IFSSTWDH	8	45	496.7276866163173	991.4408202994347	2	496.7289733886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IFSSTWDH_	ENST00000596842.5_1_19:18970283-18970517:+|nuORF	57.452649787351945	0.526999880452039	1				NaN	NaN	0	NaN	5715	4378	10091
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10096	31.412	NaN	3276.4	30	0	1433.8	0.106	+			21272	KLNQQKRHRET	11	42	719.4047514801285	1436.794950027057	2	719.4044799804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KLNQQKRHRET_	ENSG00000184735|ENST00000327968|DDX53	8.693696342081763	0.8297815791940972	1				NaN	NaN	0	NaN	5716	4378	10091
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10097	31.414	NaN	1475.4	30	0	256.66	0.106	+			28695	NNALFGLDIS	10	56	532.2747710791361	NaN	0	532.2753295898438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NNALFGLDIS_	ENST00000264260.6_2_2:103039712-103039787:+|nuORF	42.396135135203025	0.3536752194735987	1				NaN	NaN	0	NaN	5717	4378	10091
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10098	31.416	NaN	801.24	30	0	63.934	0.033	+			24651	LGTNIKDL	8	39	437.2555906853232	872.4966284374465	2	437.25579833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LGTNIKDL_	ENSG00000205359|ENST00000506729|SLCO6A1;nc|ENSG00000205359|Q86UG4-2|SLCO6A1;SLCO6A1|p.F525Vfs*12|1|0.2|ENSG00000205359|chr5:102413043-102413044|-/C|frameshift_variant	35.61828744233558	0.6843154725607303	1				NaN	NaN	0	NaN	5718	4378	10091
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10103	31.431	NaN	5779.3	30	0	523.18	0.214			+	11375	FLLFFCMH	8	67	529.2523998764977	1056.4902468197954	2	529.7612915039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FLLFFCMH_	REV__OR7A10|p.Q100H|1|0.16|ENSG00000127515|chr19:14841578-14841578|C/G|missense_variant	54.89457262308372	0.5523244765420926	1				NaN	NaN	0	NaN	5720	4381	10102
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10104	31.434	NaN	1777.2	30	0	549.52	0.037	+			33543	RLEADANQVL	10	45	564.8037526904632	1127.5929524477262	2	564.8045654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RLEADANQVL_	ENSG00000169105|ENST00000306243|CHST14	23.52269567125451	0.6877354443478558	1				NaN	NaN	0	NaN	5721	4381	10102
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10110	31.45	NaN	1865	30	0	122.63	0.213			+	-1	WKCGLSAFQR	10	59	626.8172304285098	1251.6199079238195	2	626.8170776367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_WKC(Carbamidomethyl (C))GLSAFQR_	REV__ENST00000377242.7_1_10:20105398-20106118:+|nuORF	45.97224482568171	0.49411383603842696	1				NaN	NaN	0	NaN	5724	4384	10109
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10111	31.454	NaN	1913.8	30	0	266.05	0.106	+			48548	VTNWDDMEK	9	64	569.2472520931099	1136.4799512530196	2	569.7501831054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTNWDDMEK_	ACTB|p.I85T|1|0.1|ENSG00000075624|chr7:5529270-5529270|A/G|missense_variant;ENSG00000075624|ENST00000646664|ACTB;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENST00000436287.1_1_1:224052226-224052508:-|nuORF;ENST00000457622.1_1_6:46172676-46173294:+|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000502306.1_1_5:15450853-15451165:+|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF	77.53327743719008	0.1082147015697554	1				NaN	NaN	0	NaN	5725	4384	10109
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10112	31.456	NaN	1743.7	30	0	120.81	0.036	+			45122	TVKEFRQLA	9	63	546.3134068199103	1090.6122607066204	2	546.81640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVKEFRQLA_	ENSG00000107077|ENST00000381309|KDM4C;ENST00000480996.1_1_9:6805652-6819052:+|nuORF;ENST00000489243.5_1_9:6758133-6893415:+|nuORF;nc|ENSG00000293552|Q9H3R0-2|KDM4C;nc|ENSG00000293552|Q9H3R0-3|KDM4C;nc|ENSG00000293552|Q9H3R0-4|KDM4C	45.97224482568171	0.3502073465782774	1				NaN	NaN	0	NaN	5726	4384	10109
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10116	31.47	NaN	1924	30	0	188.53	0.213				-1	HAMGVWLASSM	11	57	611.2725590798393	1220.5305652264785	2	611.7737426757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_HAM(Oxidation (M))GVWLASSM(Oxidation (M))_	LTR1_dup85|chr7:101629186-101629993:-|1.8197208364654407|0.0003248618387484|12.45|329.0|33|3|anti-sense	39.252832667884924	0.5681665794958463	1				NaN	NaN	0	NaN	5727	4387	10115
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10117	31.474	NaN	2324.2	30	0	370.82	0.106	+			51185	YPIEHGIITN	10	68	578.8034093792262	1155.5922658252523	2	578.8035278320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YPIEHGIITN_	ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENST00000473016.1_1_2:74120109-74129648:+|nuORF;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000488967.5_1_10:90706975-90712518:-|nuORF	52.936696900407355	0.4300801048568001	1				NaN	NaN	0	NaN	5728	4387	10115
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10118	31.476	NaN	1930.9	30	0	550.51	0.035			+	8532	EAVDTKKPK	9	50	508.2928052261138	1014.5710575190276	2	508.2925109863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EAVDTKKPK_	REV__ENST00000466133.1_1_3:159820071-159820575:+|nuORF	52.936696900407355	0.27249468807391813	1				NaN	NaN	0	NaN	5729	4387	10115
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10125	31.493	NaN	3298.2	30	0	272.44	0.214	+			20081	KEKGTWVQL	9	66	544.8081344842374	1087.6017160352746	2	544.8087768554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEKGTWVQL_	ENSG00000122026|ENST00000311549|RPL21;ENST00000406094.1_1_6:107090584-107090800:+|nuORF;ENST00000483765.5_1_13:27827977-27830662:+|nuORF	79.48907831485694	0.09975780661107167	1				NaN	NaN	0	NaN	5733	4390	10124
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10126	31.497	NaN	2587.6	30	0	1517.1	0.106	+			30132	PRSPLSLEA	9	45	485.2715616592773	968.5285703853547	2	485.2715148925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PRSPLSLEA_	ENST00000301633.8_1_17:76220486-76220657:+|nuORF	32.81241826257853	0.4965981579233955	1				NaN	NaN	0	NaN	5734	4390	10124
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10127	31.499	NaN	1046.5	30	0	142.78	0.106			+	-1	EACGSGWIL	9	42	496.7276866163173	991.4408202994347	2	497.2276306152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_EAC(Carbamidomethyl (C))GSGWIL_	REV__ENST00000319283.7_1_3:39149466-39149664:-|nuORF	26.79610172149135	0.5528238334041078	1				NaN	NaN	0	NaN	5735	4390	10124
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10128	31.501	NaN	1756.4	30	0	151.6	0.037	+			34833	RYPDSHQLF	9	53	581.78546501623	NaN	0	581.7855224609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RYPDSHQLF_	ENSG00000138757|ENST00000359707|G3BP2;nc|ENSG00000138757|Q9UN86-2|G3BP2	41.42661286455405	0.26577678759562784	1				NaN	NaN	0	NaN	5736	4390	10124
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10134	31.517	NaN	2592.4	30	0	328.44	0.214			+	-1	TSFVSLMKK	9	61	528.7901768838033	1055.5658008344064	2	528.7904663085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_TSFVSLM(Oxidation (M))KK_	REV__HIRA|p.R755K|1|0.21|ENSG00000100084|chr22:19357022-19357022|C/T|missense_variant	51.33545320467046	0.2872990594074956	1				NaN	NaN	0	NaN	5739	4393	10133
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10135	31.521	NaN	1617.6	30	0	302.83	0.106			+	6871	CLGDPSARYY	10	46	572.7581668375914	1143.5017807419827	2	572.7591552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_CLGDPSARYY_	REV__ENSG00000130702|ENST00000252999|LAMA5;REV__ENST00000370691.6_1_20:60885298-60889553:-|nuORF;REV__LAMA5|p.A3459Qfs*25|1|0.42|ENSG00000130702|chr20:62310736-62310736|C/-|frameshift_variant;REV__LAMA5|p.P3242Rfs*47|1|0.41|ENSG00000130702|chr20:62311700-62311700|C/-|frameshift_variant	25.57405402267927	0.6709832231498071	1				NaN	NaN	0	NaN	5740	4393	10133
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10136	31.522	NaN	1540.8	30	0	153.79	0.106	+			191	AALDWVTKK	9	56	516.297955671136	1030.581358409072	2	516.2982177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AALDWVTKK_	ENSG00000227057|ENST00000374617|WDR46;ENST00000488944.5_1_6:33255341-33255794:-|nuORF	74.25504064058377	0.12238981753128622	1				NaN	NaN	0	NaN	5741	4393	10133
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10137	31.524	NaN	1055.5	30	0	132.65	0.035				-1	SALNWKPF	8	44	502.7617985068621	1003.5090440805242	2	502.7621154785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SALNWKPF_	ENSG00000174032|ENST00000519676|SLC25A30	40.77816245573522	0.6514838689002179	1				NaN	NaN	0	NaN	5742	4393	10133
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10144	31.541	NaN	2518.3	30	0	370.06	0.214			+	13874	GRAATMTD	8	51	432.6979275402286	863.3813021472572	2	432.6977844238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))GRAATMTD_	REV__ENST00000380752.9_1_13:30087970-30088375:-|nuORF	53.351449002276354	0.5676011784961348	1				NaN	NaN	0	NaN	5746	4396	10143
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10145	31.544	NaN	2191.2	30	0	217.54	0.106	+			7796	DPHTVTVSM	9	63	493.73399597338533	985.4534390135707	2	493.73394775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DPHTVTVSM_	BRD8|p.G620Wfs*10|1|0.17|ENSG00000112983|chr5:138164101-138164102|-/A|frameshift_variant;BRD8|p.P1065Lfs*29|1|0.14|ENSG00000112983|chr5:138149724-138149724|G/-|frameshift_variant;ENSG00000112983|ENST00000254900|BRD8;nc|ENSG00000112983|Q9H0E9-2|BRD8;nc|ENSG00000112983|Q9H0E9-3|BRD8;nc|ENSG00000112983|Q9H0E9-4|BRD8	87.75429964447693	0.0711966946989736	1				NaN	NaN	0	NaN	5747	4396	10143
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10146	31.546	NaN	1571.5	30	0	277.23	0.035	+			34121	RSSGFISEL	9	59	498.2609968172618	994.5074407013236	2	498.2615661621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RSSGFISEL_	ENSG00000079691|ENST00000329474|CARMIL1;nc|ENSG00000079691|Q5VZK9-2|CARMIL1	39.252832667884924	0.4290233611298554	1				NaN	NaN	0	NaN	5748	4396	10143
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10152	31.562	NaN	8116.4	30	0	1448.4	0.215	+			35232	SALEHSIQY	9	63	524.2591197958285	1046.503686658457	2	524.259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SALEHSIQY_	ENSG00000121691|ENST00000241052|CAT;ENST00000525707.1_1_11:34482779-34490041:+|nuORF	69.6276240434122	0.14239879520340665	1				NaN	NaN	0	NaN	5751	4399	10151
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10153	31.566	NaN	1862	30	0	290.74	0.106	+			30526	QAIIDVLTKR	10	45	386.2382609425249	NaN	0	386.23663330078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QAIIDVLTKR_	ENSG00000264230|ENST00000619162|ANXA8L1;ENSG00000265190|ENST00000585281|ANXA8;nc|ENSG00000264230|Q5VT79-2|ANXA8L1;nc|ENSG00000276850|P13928-2|ANXA8	34.08650109265054	0.3882526356989144	1				NaN	NaN	0	NaN	5752	4399	10151
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10154	31.568	NaN	1700.2	30	0	143.1	0.106	+			6507	AYAPPPHVI	9	54	482.7655954613233	NaN	0	482.7659912109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AYAPPPHVI_	ENSG00000128335|ENST00000358502|APOL2	39.021493756699265	0.2805557132942146	1				NaN	NaN	0	NaN	5753	4399	10151
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10155	31.57	NaN	1455.5	30	0	115.87	0.106	+			37434	SLHLHPEL	8	55	473.2592637871925	NaN	0	473.2607421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLHLHPEL_	nc|ENSG00000176840|Q8N6C7|MIR7-3HG	31.954861631926434	1.7418937515398478	1				NaN	NaN	0	NaN	5754	4399	10151
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10156	31.572	NaN	1637	30	0	158.09	0.106	+			30133	PRSPSPEPTV	10	58	533.7795776250545	1065.5446023169088	2	533.7752685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PRSPSPEPTV_	ENSG00000126368|ENST00000246672|NR1D1;ENSG00000142599|ENST00000400908|RERE;nc|ENSG00000142599|Q9P2R6-2|RERE;RERE|p.T1358Dfs*37|1|0.36|ENSG00000142599|chr1:8358464-8358465|-/G|frameshift_variant	33.921630207806714	0.6028135429846169	1				NaN	NaN	0	NaN	5755	4399	10151
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10157	31.573	NaN	1736.2	30	0	238.5	0.036				-1	FLLCLCQAL	9	61	540.7820714748251	1079.54959001645	2	540.782470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_FLLCLC(Carbamidomethyl (C))QAL_	L1PA5_dup2765|chr4:69723015-69726028:+|1.903650506224423|0.171219590839865|3.47|472.0|110|1|anti-sense	42.47446043378293	0.39123495718708534	1				NaN	NaN	0	NaN	5756	4399	10151
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10165	31.593	NaN	5675.8	30	0	1379.2	0.214	+			43996	TPHSYIDTY	9	66	548.7507236934849	1095.4868944537698	2	548.751220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TPHSYIDTY_	ENSG00000182240|ENST00000330333|BACE2;ENST00000491838.5_1_21:42598231-42618026:+|nuORF;nc|ENSG00000182240|Q9Y5Z0-2|BACE2;nc|ENSG00000182240|Q9Y5Z0-3|BACE2;nc|ENSG00000182240|Q9Y5Z0-4|BACE2;nc|ENSG00000182240|Q9Y5Z0-5|BACE2	60.97194046774394	0.20551255781574032	1				NaN	NaN	0	NaN	5761	4402	10164
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10166	31.597	NaN	2934.6	30	0	502.51	0.106	+			36007	SEIDTNQNSL	10	71	560.7589204392191	1119.503287945238	2	560.759033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEIDTNQNSL_	DAB2|p.F398Lfs*15|1|0.36|ENSG00000153071|chr5:39382765-39382765|A/-|frameshift_variant;ENSG00000153071|ENST00000320816|DAB2;nc|ENSG00000153071|P98082-3|DAB2	65.2775769800794	0.31784129392001936	1				NaN	NaN	0	NaN	5762	4402	10164
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10167	31.599	NaN	4095.6	30	0	371.76	0.106	+			19161	IYQRDPLKL	9	66	573.3370916035338	1144.6596302738676	2	573.3375244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IYQRDPLKL_	ENSG00000166888|ENST00000300134|STAT6;ENST00000555641.1_1_12:57499966-57502061:-|nuORF;STAT6|p.G815Efs*27|3|0.31|ENSG00000166888|chr12:57096672-57096672|C/-|frameshift_variant	40.77816245573522	0.41113185337114944	1				NaN	NaN	0	NaN	5763	4402	10164
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10168	31.6	NaN	1644.5	30	0	151.54	0.106	+			39730	STISIFHCK	9	55	518.2680533865653	1034.5215538399304	2	518.2683715820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STISIFHCK_	ENST00000554584.5_1_14:64375879-64407376:+|nuORF	56.72105179125745	0.24094814563026265	1				NaN	NaN	0	NaN	5764	4402	10164
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10169	31.602	NaN	796.02	30	0	378.91	0.03	+			46772	VGVGVGVG	8	31	322.1933076537477	642.3720623742954	2	322.1935119628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VGVGVGVG_	ENSG00000107864|ENST00000265997|CPEB3;ENSG00000107864|ENST00000265997|CPEB3;nc|ENSG00000107864|Q8NE35-2|CPEB3;nc|ENSG00000107864|Q8NE35-2|CPEB3;REV__ENSG00000107864|ENST00000265997|CPEB3;REV__ENSG00000107864|ENST00000265997|CPEB3;REV__nc|ENSG00000107864|Q8NE35-2|CPEB3;REV__nc|ENSG00000107864|Q8NE35-2|CPEB3	10.184766708764876	0.7843118145031319	1				NaN	NaN	0	NaN	5765	4402	10164
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10176	31.62	NaN	1248	30	0	123.15	0.214			+	-1	CLHLPGLAW	9	52	533.7795776250545	1065.5446023169088	2	533.7786254882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_C(Carbamidomethyl (C))LHLPGLAW_	REV__ENST00000372014.4_1_6:44081832-44095144:-|nuORF	39.021493756699265	0.43173687394350213	1				NaN	NaN	0	NaN	5769	4405	10175
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10177	31.624	NaN	1712.1	30	0	145.14	0.038	+			6609	AYQKQPTIFQ	10	59	612.3248940052057	1222.6352350772113	2	612.3247680664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AYQKQPTIFQ_	ENSG00000142534|ENST00000270625|RPS11;ENST00000599167.5_1_19:49999677-50000690:+|nuORF;ENST00000600027.5_1_19:49999677-50000944:+|nuORF	38.753607047826485	0.5606299674732264	1				NaN	NaN	0	NaN	5770	4405	10175
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10186	31.656	NaN	1028.4	30	0	201.25	0.144			+	25130	LLQTVTSNAY	10	38	555.2959636610158	1108.5773743888315	2	555.2960815429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LLQTVTSNAY_	REV__ABCA2|p.F605Lfs*4|1|0.21|ENSG00000107331|chr9:137018723-137018723|A/-|frameshift_variant;REV__ABCA2|p.G2110Afs*11|1|0.41|ENSG00000107331|chr9:137010217-137010217|C/-|frameshift_variant;REV__ENSG00000107331|ENST00000341511|ABCA2;REV__ENST00000398207.8_1_9:139916273-139923324:-|nuORF;REV__ENST00000459850.5_1_9:139905575-139923366:-|nuORF;REV__ENST00000476211.5_1_9:139916273-139923324:-|nuORF;REV__ENST00000494046.5_1_9:139914760-139922592:-|nuORF;REV__nc|ENSG00000107331|Q9BZC7-2|ABCA2;REV__nc|ENSG00000107331|Q9BZC7-4|ABCA2;REV__nc|ENSG00000107331|Q9BZC7|ABCA2	19.1035232394073	0.7193765342308498	1				NaN	NaN	0	NaN	5773	4411	10185
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10193	31.676	NaN	2353.4	30	0	441.95	0.143	+			35421	SARLVYSVL	9	50	336.53422005736184	1006.5808307722855	3	336.86859130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SARLVYSVL_	CDH22|p.I579Sfs*4|1|0.33|ENSG00000149654|chr20:46178126-46178126|T/-|frameshift_variant;ENSG00000149654|ENST00000537909|CDH22	26.79610172149135	0.5528238334041078	1				NaN	NaN	0	NaN	5777	4414	10192
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10198	31.692	NaN	4404.9	30	0	832.41	0.214				-1	 	0	57	350.2067294564005	698.3989059796011	2	350.2067565917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	5779	4417	10197
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10199	31.696	NaN	5762.9	30	0	883.72	0.106	+			24874	LKGDNLPQY	9	71	524.277073299971	1046.539593666742	2	524.27783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LKGDNLPQY_	ENSG00000205277|ENST00000536621|MUC12;nc|ENSG00000205277|Q9UKN1|MUC12	40.77816245573522	0.41113185337114944	1				NaN	NaN	0	NaN	5780	4417	10197
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10200	31.698	NaN	1679	30	0	222.27	0.106			+	29815	PKKAPAAS	8	44	385.23227272048433	768.4499925077687	2	385.23175048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PKKAPAAS_	REV__ENSG00000137221|ENST00000372449|TJAP1;REV__ENST00000483640.5_1_6:43466739-43470406:+|nuORF;REV__nc|ENSG00000137221|Q5JTD0-2|TJAP1;REV__nc|ENSG00000137221|Q5JTD0-3|TJAP1	13.775330524044264	0.789990904165365	1				NaN	NaN	0	NaN	5781	4417	10197
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10201	31.7	NaN	1570	30	0	107.92	0.106	+			12663	GEITGEVHM	9	60	486.7260704156982	NaN	0	486.7254638671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEITGEVHM_	ENSG00000136068|ENST00000295956|FLNB;ENST00000481470.5_1_3:58118395-58154450:+|nuORF;nc|ENSG00000136068|O75369-2|FLNB;nc|ENSG00000136068|O75369-3|FLNB;nc|ENSG00000136068|O75369-4|FLNB;nc|ENSG00000136068|O75369-5|FLNB;nc|ENSG00000136068|O75369-6|FLNB;nc|ENSG00000136068|O75369-7|FLNB;nc|ENSG00000136068|O75369-8|FLNB;nc|ENSG00000136068|O75369-9|FLNB	87.75429964447693	0.046123490950689	1				NaN	NaN	0	NaN	5782	4417	10197
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10202	31.701	NaN	2292.2	30	0	1073.6	0.106	+			45790	VAGNPKPKI	9	46	462.28733066781234	922.5601084024247	2	462.28717041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VAGNPKPKI_	ENSG00000129116|ENST00000505667|PALLD;ENST00000507699.1_1_4:169819634-169847533:+|nuORF;ENST00000511682.1_1_4:169819766-169825111:+|nuORF;nc|ENSG00000129116|Q8WX93-2|PALLD;nc|ENSG00000129116|Q8WX93-3|PALLD;nc|ENSG00000129116|Q8WX93-4|PALLD;nc|ENSG00000129116|Q8WX93-5|PALLD;nc|ENSG00000129116|Q8WX93-7|PALLD;nc|ENSG00000129116|Q8WX93-8|PALLD;nc|ENSG00000129116|Q8WX93|PALLD	31.954861631926434	0.5046124803899898	1				NaN	NaN	0	NaN	5783	4417	10197
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10203	31.703	NaN	886.48	30	0	135.88	0.034	+			27936	MVFGHVLI	8	35	458.2603960428161	914.5062391524323	2	458.2606201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MVFGHVLI_	ENST00000552401.5_2_6:90572044-90572224:+|nuORF	33.49298260027079	0.7007254697536482	1				NaN	NaN	0	NaN	5784	4417	10197
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10208	31.718	NaN	3016.6	30	0	662.21	0.214	+			36493	SEYDRGVNTF	10	60	594.2701243021671	1186.5256956711341	2	594.270263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEYDRGVNTF_	ENSG00000143106|ENST00000271308|PSMA5;ENST00000484563.1_1_1:109955653-109968973:-|nuORF	68.62578634547417	0.2885473079336931	1				NaN	NaN	0	NaN	5786	4420	10207
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10209	31.721	NaN	2885.2	30	0	348.82	0.04	+			11003	FEHCNFNDVTT	11	59	692.284929869232	1382.5553068052639	2	692.2853393554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_FEHC(Carbamidomethyl (C))NFNDVTT_	ENSG00000085063|ENST00000642928|CD59;nc|ENSG00000284969|P13987-2|CD59	45.02220120713402	0.4892240028381124	1				NaN	NaN	0	NaN	5787	4420	10207
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10217	31.741	NaN	2253.3	30	0	439.94	0.143	+			1317	AETEPIVKM	9	56	509.26783001715256	1016.5211071011051	2	509.26751708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AETEPIVKM_	ENSG00000104408|ENST00000220849|EIF3E;ENST00000518442.5_1_8:109247181-109261015:-|nuORF	90.36981228632155	0.0638227155548745	1				NaN	NaN	0	NaN	5792	4423	10216
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10224	31.761	NaN	2771.6	30	0	492.59	0.214	+			1135	AEMAQNAVRL	10	64	551.787127451948	1101.5597019706959	2	551.7877197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEMAQNAVRL_	ENSG00000168036|ENST00000349496|CTNNB1	99.01295224348159	0.08062808246117298	1				NaN	NaN	0	NaN	5796	4426	10223
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10225	31.765	NaN	2446.4	30	0	364.98	0.106			+	51420	YTVGKKPKS	9	48	336.5341337777381	1006.5805719334143	3	336.5342102050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YTVGKKPKS_	REV__ENSG00000205221|ENST00000379242|VIT;REV__nc|ENSG00000205221|Q6UXI7-2|VIT;REV__nc|ENSG00000205221|Q6UXI7-3|VIT;REV__nc|ENSG00000205221|Q6UXI7-5|VIT;REV__nc|ENSG00000205221|Q6UXI7|VIT	19.996771675451527	0.6112419832031292	1				NaN	NaN	0	NaN	5797	4426	10223
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10226	31.767	NaN	1960.7	30	0	140.82	0.036	+			21462	KNGINDIKY	9	64	532.7907516237872	NaN	0	532.7900390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KNGINDIKY_	PRKG2|p.K707Yfs*4|1|0.03|ENSG00000138669|chr4:81104377-81104378|-/TAGTAGATGTA|frameshift_variant	62.107414245175825	0.1403307765918332	1				NaN	NaN	0	NaN	5798	4426	10223
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10230	31.781	NaN	2264.8	30	0	285.78	0.144	+			43891	TNFEDRNAF	9	58	557.2516593369271	1112.4887657406541	2	557.2523193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TNFEDRNAF_	CYFIP1|p.K121Nfs*2|1|0.14|ENSG00000273749|chr15:22944582-22944582|T/-|frameshift_variant;CYFIP2|p.Q484Rfs*7|1|0.08|ENSG00000055163|chr5:157319855-157319856|-/GA|frameshift_variant;ENSG00000055163|ENST00000620254|CYFIP2;ENSG00000273749|ENST00000617928|CYFIP1;nc|ENSG00000055163|Q96F07|CYFIP2	65.46538089061403	0.16805504838372562	1				NaN	NaN	0	NaN	5799	4429	10229
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10236	31.799	NaN	3261.3	30	0	290.37	0.142	+			5838	AVIGPGAFAGL	11	63	486.7771728255088	NaN	0	486.777587890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVIGPGAFAGL_	ENSG00000182704|ENST00000333090|TSKU	40.5726180659479	0.38302970871559716	1				NaN	NaN	0	NaN	5802	4432	10235
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10245	31.822	NaN	8757.5	30	0	1259.4	0.214	+			15682	GVMTVLIKR	9	77	508.817835227377	1015.621117521554	2	508.8177490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVMTVLIKR_	ENSG00000109971|ENST00000534624|HSPA8;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;HSPA8|p.K569Dfs*6|1|0.3|ENSG00000109971|chr11:123058302-123058303|TC/-|frameshift_variant;nc|ENSG00000109971|P11142-2|HSPA8	131.03138772384656	0.014687601201650916	1				NaN	NaN	0	NaN	5808	4435	10244
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10246	31.826	NaN	2697.6	30	0	496.75	0.106			+	6722	CAKLKKGL	8	56	430.77266658116076	859.5307802291215	2	430.7727355957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_CAKLKKGL_	REV__BRIP1|p.I504Nfs*7|1|0.53|ENSG00000136492|chr17:61784387-61784388|-/T|frameshift_variant;REV__ENSG00000136492|ENST00000259008|BRIP1;REV__nc|ENSG00000136492|Q9BX63-2|BRIP1	25.450171626174864	0.7628259754767981	1				NaN	NaN	0	NaN	5809	4435	10244
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10247	31.828	NaN	7558.6	30	0	4743.1	0.106			+	49124	VVLRCLSKV	9	37	339.54746477688525	1015.6205649308558	3	339.5475158691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVLRCLSKV_	REV__ENST00000510104.5_1_5:140071123-140075505:+|nuORF;REV__ENST00000513912.1_1_5:140073076-140073352:+|nuORF	18.324413293986947	0.6112419832031293	1				NaN	NaN	0	NaN	5810	4435	10244
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10248	31.83	NaN	1064.9	30	0	65.938	0.106				-1	VCAVLWVL	8	50	480.27340650703826	NaN	0	480.2734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_VC(Carbamidomethyl (C))AVLWVL_	ENSG00000178623|ENST00000407714|GPR35;nc|ENSG00000178623|Q9HC97-2|GPR35	33.49298260027079	1.7418937515398478	1				NaN	NaN	0	NaN	5811	4435	10244
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10249	31.831	NaN	1704.9	30	0	110.33	0.036				-1	LSCSWRQR	8	68	546.7701188817055	1091.5256848302108	2	546.76953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_LSC(Carbamidomethyl (C))SWRQR_	ENST00000555540.1_1_14:35981656-35982271:-|nuORF	71.37791200682192	0.3954169775488141	1				NaN	NaN	0	NaN	5812	4435	10244
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10258	31.851	NaN	2090.4	30	0	245.26	0.214	+			20957	KKDYQYPKS	9	69	578.8032837218768	1155.5920145105536	2	578.803955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KKDYQYPKS_	ADGRG7|p.V664Ffs*4|1|0.11|ENSG00000144820|chr3:100668952-100668952|A/-|frameshift_variant;ENSG00000144820|ENST00000273352|ADGRG7	54.776311868738084	0.25715957988447635	1				NaN	NaN	0	NaN	5818	4438	10257
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10259	31.855	NaN	1696.2	30	0	235.03	0.037				-1	ELCEMKQKP	9	58	581.7855092477721	NaN	0	581.7860717773438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_ELC(Carbamidomethyl (C))EMKQKP_	ENSG00000173230|ENST00000614479|GOLGB1;GOLGB1|p.D2495Tfs*21|1|0.22|ENSG00000173230|chr3:121691867-121691867|T/-|frameshift_variant;GOLGB1|p.K2450Rfs*27|1|0.37|ENSG00000173230|chr3:121692000-121692000|T/-|frameshift_variant;GOLGB1|p.Q2186Sfs*19|1|0.31|ENSG00000173230|chr3:121693952-121693952|G/-|frameshift_variant;GOLGB1|p.S1501Vfs*38|1|0.2|ENSG00000173230|chr3:121696007-121696007|T/-|frameshift_variant;nc|ENSG00000173230|Q14789-2|GOLGB1;nc|ENSG00000173230|Q14789-3|GOLGB1;nc|ENSG00000173230|Q14789-4|GOLGB1;nc|ENSG00000173230|Q14789|GOLGB1	23.04248740728303	0.3589936788096251	1				NaN	NaN	0	NaN	5819	4438	10257
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10270	31.88	NaN	1830.3	30	0	166.86	0.145	+			10647	EYQIKTNQL	9	62	568.8006607402136	1135.5867685472272	2	568.80126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EYQIKTNQL_	ENSG00000148444|ENST00000376836|COMMD3;ENST00000463409.6_1_10:22605382-22615407:+|nuORF;ENST00000496071.5_1_10:22607528-22608924:+|nuORF;ENST00000602395.1_1_10:22607528-22615407:+|nuORF;ENST00000602574.5_1_10:22607528-22607842:+|nuORF	63.53385203322761	0.18415635464017938	1				NaN	NaN	0	NaN	5827	4441	10269
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10276	31.898	NaN	1970.3	30	0	131.09	0.214	+			13134	GGMSIFLKK	9	60	490.7831034614503	979.5516539897006	2	490.78277587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GGMSIFLKK_	ENST00000264995.7_1_3:131220431-131221595:-|nuORF	44.116797842482775	0.37197099687881774	1				NaN	NaN	0	NaN	5830	4444	10275
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10277	31.902	NaN	2736	30	0	407.67	0.106	+			20290	KEPEINTTL	9	52	522.7821585309146	1043.549764128629	2	522.782958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEPEINTTL_	ENSG00000165487|ENST00000382374|MICU2;ENST00000480341.5_1_13:22077016-22089705:-|nuORF	54.722347961057174	0.257609425301511	1				NaN	NaN	0	NaN	5831	4444	10275
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10278	31.904	NaN	2055.9	30	0	198.23	0.106	+			50637	YEDATKITV	9	55	520.268780572528	1038.523008211856	2	520.2688598632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YEDATKITV_	ENSG00000132383|ENST00000254719|RPA1	51.19269402634007	0.2889735674168909	1				NaN	NaN	0	NaN	5832	4444	10275
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10279	31.906	NaN	5537.1	30	0	288.09	0.106	+			45620	TYQEVAQKF	9	65	557.2820229257966	1112.549492918393	2	557.2837524414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TYQEVAQKF_	ENSG00000093072|ENST00000399837|ADA2;nc|ENSG00000093072|Q9NZK5-2|ADA2	112.2953585152457	0.026655838328212944	1				NaN	NaN	0	NaN	5833	4444	10275
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10280	31.908	NaN	2338.1	30	0	262.64	0.039	+			23065	KVTPNTVLENF	11	60	631.3428365847174	1260.6711202362346	2	631.342529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KVTPNTVLENF_	ENSG00000154227|ENST00000679737|CERS3	20.83715455343099	0.7712264395190968	1				NaN	NaN	0	NaN	5834	4444	10275
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10288	31.926	NaN	5166.9	30	0	1045.5	0.214	+			14092	GSLGFTVTK	9	56	455.255520198301	908.496487463402	2	455.25537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSLGFTVTK_	ENSG00000163629|ENST00000411767|PTPN13;nc|ENSG00000163629|Q12923-2|PTPN13;nc|ENSG00000163629|Q12923-3|PTPN13;nc|ENSG00000163629|Q12923-4|PTPN13;PTPN13|p.T2330Qfs*13|1|0.12|ENSG00000163629|chr4:86807799-86807799|A/-|frameshift_variant	104.01359247289065	0.03510646158778409	1				NaN	NaN	0	NaN	5839	4447	10287
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10289	31.929	NaN	1078.1	30	0	106.86	0.106			+	-1	IMDGLTTAGAL	11	52	539.7782053037567	NaN	0	539.7766723632812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_IM(Oxidation (M))DGLTTAGAL_	REV__ENSG00000117153|ENST00000367261|KLHL12;REV__nc|ENSG00000117153|Q53G59-2|KLHL12	45.97224482568171	0.34424757290527136	1				NaN	NaN	0	NaN	5840	4447	10287
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10290	31.931	NaN	794.58	30	0	114.23	0.106			+	28679	NLVQWKSA	8	46	473.25903119011525	NaN	0	473.259033203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NLVQWKSA_	REV__ENSG00000146857|ENST00000662584|STRA8;REV__nc|ENSG00000146857|Q7Z7C7|STRA8	38.80614096846853	1.7418937515398478	1				NaN	NaN	0	NaN	5841	4447	10287
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10291	31.933	NaN	2141.8	30	0	295.1	0.106	+			38229	SQLEQENNLLK	11	69	658.3460180393216	1314.6774831454431	2	658.3465576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SQLEQENNLLK_	ENSG00000102804|ENST00000458659|TSC22D1;ENST00000496314.1_1_13:45008764-45009186:-|nuORF;nc|ENSG00000102804|Q15714-2|TSC22D1;nc|ENSG00000102804|Q15714-3|TSC22D1;nc|ENSG00000102804|Q15714-5|TSC22D1	75.56570413236392	0.18934020192193834	1				NaN	NaN	0	NaN	5842	4447	10287
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10292	31.935	NaN	863.09	30	0	127.26	0.106			+	42658	TAVQPALAP	9	45	434.25007445412314	866.4855959750463	2	434.2500305175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TAVQPALAP_	REV__ENSG00000186583|ENST00000377470|SPATC1;REV__nc|ENSG00000186583|Q76KD6-2|SPATC1	45.9519527083369	0.35044536499095585	1				NaN	NaN	0	NaN	5843	4447	10287
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10293	31.937	NaN	786.68	30	0	214.23	0.106			+	30346	PTVKPDYN	8	29	467.23874632820923	932.4629397232185	2	467.2381591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PTVKPDYN_	REV__ENSG00000174780|ENST00000642900|SRP72;REV__nc|ENSG00000174780|O76094-2|SRP72	19.359975847455235	0.7988239741663654	1				NaN	NaN	0	NaN	5844	4447	10287
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10294	31.939	NaN	1476.2	30	0	106.8	0.034	+			6508	AYAPPPHVI	9	49	482.7655954613233	NaN	0	482.7654724121094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AYAPPPHVI_	ENSG00000128335|ENST00000358502|APOL2	49.21078951299608	0.21213183292994464	1				NaN	NaN	0	NaN	5845	4447	10287
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10302	31.958	NaN	4300.2	30	0	711.38	0.214	+			5901	AVLDFVKQK	9	65	524.3134251592176	1046.612297385235	2	524.314208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVLDFVKQK_	ENSG00000186001|ENST00000425562|LRCH3;nc|ENSG00000186001|Q96II8-2|LRCH3;nc|ENSG00000186001|Q96II8-3|LRCH3;nc|ENSG00000186001|Q96II8-4|LRCH3	118.74307786436346	0.02196067127630568	1				NaN	NaN	0	NaN	5850	4450	10301
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10303	31.962	NaN	12071	30	0	7359.2	0.106	+			5902	AVLDFVKQK	9	55	349.877895668609	1046.6118576060271	3	349.8780517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVLDFVKQK_	ENSG00000186001|ENST00000425562|LRCH3;nc|ENSG00000186001|Q96II8-2|LRCH3;nc|ENSG00000186001|Q96II8-3|LRCH3;nc|ENSG00000186001|Q96II8-4|LRCH3	25.450171626174864	0.5654022654467333	1				NaN	NaN	0	NaN	5851	4450	10301
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10304	31.964	NaN	2605	30	0	589.61	0.106			+	21435	KNATDQVETLW	11	57	652.8273825160331	1303.6402120988662	2	652.8280029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KNATDQVETLW_	REV__CACNA1C|p.A2072Pfs*18|1|0.55|ENSG00000151067|chr12:2688729-2688729|G/-|frameshift_variant;REV__CACNA1C|p.E1194Gfs*8|1|0.17|ENSG00000151067|chr12:2608669-2608670|-/G|frameshift_variant;REV__CACNA1C|p.P2073Qfs*17|1|0.21|ENSG00000151067|chr12:2688733-2688733|C/-|frameshift_variant;REV__ENSG00000151067|ENST00000399655|CACNA1C;REV__nc|ENSG00000151067|Q13936-10|CACNA1C;REV__nc|ENSG00000151067|Q13936-11|CACNA1C;REV__nc|ENSG00000151067|Q13936-13|CACNA1C;REV__nc|ENSG00000151067|Q13936-14|CACNA1C;REV__nc|ENSG00000151067|Q13936-15|CACNA1C;REV__nc|ENSG00000151067|Q13936-16|CACNA1C;REV__nc|ENSG00000151067|Q13936-17|CACNA1C;REV__nc|ENSG00000151067|Q13936-18|CACNA1C;REV__nc|ENSG00000151067|Q13936-19|CACNA1C;REV__nc|ENSG00000151067|Q13936-2|CACNA1C;REV__nc|ENSG00000151067|Q13936-20|CACNA1C;REV__nc|ENSG00000151067|Q13936-21|CACNA1C;REV__nc|ENSG00000151067|Q13936-22|CACNA1C;REV__nc|ENSG00000151067|Q13936-23|CACNA1C;REV__nc|ENSG00000151067|Q13936-24|CACNA1C;REV__nc|ENSG00000151067|Q13936-25|CACNA1C;REV__nc|ENSG00000151067|Q13936-26|CACNA1C;REV__nc|ENSG00000151067|Q13936-27|CACNA1C;REV__nc|ENSG00000151067|Q13936-28|CACNA1C;REV__nc|ENSG00000151067|Q13936-29|CACNA1C;REV__nc|ENSG00000151067|Q13936-3|CACNA1C;REV__nc|ENSG00000151067|Q13936-30|CACNA1C;REV__nc|ENSG00000151067|Q13936-31|CACNA1C;REV__nc|ENSG00000151067|Q13936-32|CACNA1C;REV__nc|ENSG00000151067|Q13936-33|CACNA1C;REV__nc|ENSG00000151067|Q13936-34|CACNA1C;REV__nc|ENSG00000151067|Q13936-35|CACNA1C;REV__nc|ENSG00000151067|Q13936-36|CACNA1C;REV__nc|ENSG00000151067|Q13936-37|CACNA1C;REV__nc|ENSG00000151067|Q13936-4|CACNA1C;REV__nc|ENSG00000151067|Q13936-5|CACNA1C;REV__nc|ENSG00000151067|Q13936-6|CACNA1C;REV__nc|ENSG00000151067|Q13936-7|CACNA1C;REV__nc|ENSG00000151067|Q13936-8|CACNA1C;REV__nc|ENSG00000151067|Q13936-9|CACNA1C;REV__nc|ENSG00000151067|Q13936|CACNA1C	28.081489160057373	0.6952392775027776	1				NaN	NaN	0	NaN	5852	4450	10301
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10305	31.966	NaN	1971.3	30	0	352.04	0.033	+			25534	LPTLHSLP	8	51	439.26064989252933	876.5067468518587	2	439.7618408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LPTLHSLP_	ENST00000571138.5_1_17:5014814-5017504:+|nuORF	54.76467175910256	0.5536104764165384	1				NaN	NaN	0	NaN	5853	4450	10301
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10316	31.991	NaN	1769.7	30	0	304.53	0.214			+	24821	LISGSLTIQ	9	54	466.276633364824	930.5387137964481	2	466.27606201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LISGSLTIQ_	REV__TFEC|p.R88I|1|0.2|ENSG00000105967|chr7:115974174-115974174|C/A|missense_variant	34.172542307311794	0.4838870758800184	1				NaN	NaN	0	NaN	5861	4453	10315
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10317	31.994	NaN	1130.8	30	0	136.29	0.035			+	33563	RLGEALVKL	9	47	499.82082449866397	997.627096064128	2	499.8208312988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RLGEALVKL_	REV__ENST00000291906.4_1_9:131465114-131467624:+|nuORF	32.81241826257853	0.4965981579233955	1				NaN	NaN	0	NaN	5862	4453	10315
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10322	32.009	NaN	1253.3	30	0	471.75	0.142			+	29375	PAKHVLKE	8	46	461.2795634061119	920.5445738790238	2	461.27935791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PAKHVLKE_	REV__COL2A1|p.P1046Lfs*84|1|0.13|ENSG00000139219|chr12:47977628-47977628|G/-|frameshift_variant	24.20275056022122	0.7724576178584145	1				NaN	NaN	0	NaN	5864	4456	10321
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10326	32.025	NaN	1364.3	30	0	172.93	0.214	+			34447	RTVTLWTY	8	46	520.2821574208529	1038.5497619085056	2	520.2822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTVTLWTY_	ENSG00000085433|ENST00000369962|WDR47;nc|ENSG00000085433|O94967-2|WDR47;nc|ENSG00000085433|O94967-3|WDR47;nc|ENSG00000085433|O94967-4|WDR47	42.396135135203025	0.6414440140393314	1				NaN	NaN	0	NaN	5865	4459	10325
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10327	32.029	NaN	763.6	30	0	204.94	0.106	+			28697	NNDGNFDV	8	32	447.6820126239902	NaN	0	447.6819763183594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NNDGNFDV_	CHRNB1|p.P144Rfs*74|1|0.3|ENSG00000170175|chr17:7447116-7447116|C/-|frameshift_variant;CHRNB1|p.Q341Lfs*49|1|0.23|ENSG00000170175|chr17:7454497-7454498|-/T|frameshift_variant;ENSG00000170175|ENST00000306071|CHRNB1;ENST00000573209.1_1_17:7350169-7350494:+|nuORF;nc|ENSG00000170175|P11230-2|CHRNB1	14.864876125193954	1.7418937515398478	1				NaN	NaN	0	NaN	5866	4459	10325
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10328	32.031	NaN	1357.4	30	0	230.31	0.037			+	34732	RWCIWVQY	8	53	577.2838134376796	NaN	0	577.2830200195312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RWCIWVQY_	REV__ENST00000545307.6_1_14:58666901-58669614:+|nuORF	27.882242232435846	1.7418937515398478	1				NaN	NaN	0	NaN	5867	4459	10325
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10336	32.05	NaN	3354.1	30	0	427.95	0.214	+			14953	GTMNLGGSLTR	11	57	553.7842882947497	1105.5540236562993	2	553.78515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTMNLGGSLTR_	ENSG00000077549|ENST00000264202|CAPZB;nc|ENSG00000077549|P47756-1|CAPZB	67.21430809963624	0.25905749411346113	1				NaN	NaN	0	NaN	5872	4462	10335
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10337	32.054	NaN	2000	30	0	404.72	0.106			+	24392	LFWKSCLQ	8	53	512.7667236328125	NaN	0	512.7667236328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LFWKSCLQ_	REV__ENST00000410003.5_1_2:74718663-74719302:+|nuORF;REV__ENST00000424122.5_1_2:74718663-74719302:+|nuORF	28.2542754592877	1.7418937515398478	1				NaN	NaN	0	NaN	5873	4462	10335
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10338	32.056	NaN	1320.7	30	0	172.67	0.035	+			9735	ENAKLCNTL	9	40	503.25380799553574	1004.4930630578715	2	503.75653076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ENAKLCNTL_	ENST00000261247.13_1_14:59970910-59971024:+|nuORF	42.86426827375447	0.38666266728046506	1				NaN	NaN	0	NaN	5874	4462	10335
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10347	32.078	NaN	2862.7	30	0	306.16	0.214	+			48159	VSYTRSVTL	9	62	513.2851803131816	1024.5558076931632	2	513.2853393554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSYTRSVTL_	ENSG00000275395|ENST00000616721|FCGBP;ENSG00000275395|ENST00000616721|FCGBP;FCGBP-ACSS2|1|fusion;FCGBP-ACSS2|1|fusion;nc|ENSG00000275395|Q9Y6R7|FCGBP;nc|ENSG00000275395|Q9Y6R7|FCGBP;nc|ENSG00000275395|Q9Y6R7|FCGBP	60.11826168202944	0.21262886028301267	1				NaN	NaN	0	NaN	5880	4465	10346
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10348	32.081	NaN	2289.5	30	0	437.85	0.106			+	49063	VVKEQNTDSF	10	46	389.5280816822162	1165.5624156468486	3	389.52813720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVKEQNTDSF_	REV__ENSG00000170222|ENST00000379774|ADPRM	29.170058357718403	0.6416167986984785	1				NaN	NaN	0	NaN	5881	4465	10346
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10349	32.083	NaN	1971.7	30	0	230.72	0.034	+			20407	KETGQIVAI	9	55	479.7818941052217	NaN	0	479.7814025878906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KETGQIVAI_	ENSG00000101109|ENST00000372806|STK4;nc|ENSG00000101109|Q13043-2|STK4	68.78682469695295	0.1118430353446351	1				NaN	NaN	0	NaN	5882	4465	10346
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10358	32.103	NaN	1160	30	0	230.7	0.214				-1	 	0	40	322.1936599230512	642.3727669129024	2	322.1937255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	5888	4468	10357
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10359	32.107	NaN	1965.4	30	0	186.23	0.037				-1	LNCQVSWFL	9	62	583.7882549691928	1165.5619570051856	2	583.7885131835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LNC(Carbamidomethyl (C))QVSWFL_	ENSG00000103485|ENST00000395384|QPRT	40.77816245573522	0.41113185337114944	1				NaN	NaN	0	NaN	5889	4468	10357
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10368	32.127	NaN	2353.4	30	0	227.32	0.214			+	-1	IRVAACFPA	9	59	502.77309497114817	NaN	0	502.7722473144531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_IRVAAC(Carbamidomethyl (C))FPA_	REV__ENSG00000145198|ENST00000691901|VWA5B2;REV__ENST00000461141.5_1_3:183952309-183959823:+|nuORF	42.47446043378293	0.25855550551448697	1				NaN	NaN	0	NaN	5895	4471	10367
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10369	32.13	NaN	1807.8	30	0	367.95	0.106			+	44008	TPIINPQPK	9	40	336.5341337777381	1006.5805719334143	3	336.5341491699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TPIINPQPK_	REV__ENSG00000025796|ENST00000369002|SEC63	30.503639358989545	0.5181749237905803	1				NaN	NaN	0	NaN	5896	4471	10367
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10370	32.132	NaN	1501.7	30	0	149.79	0.106			+	-1	SFVLKCVSAI	10	56	562.3120373643796	1122.6095217955592	2	562.3130493164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SFVLKC(Carbamidomethyl (C))VSAI_	REV__ENST00000305850.9_1_16:81062317-81062395:+|nuORF	32.81241826257853	0.6118718159329168	1				NaN	NaN	0	NaN	5897	4471	10367
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10371	32.134	NaN	1771.4	30	0	431.89	0.034	+			3958	ATATLIIEH	9	49	484.77392247565786	967.5332920181157	2	484.7739562988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATATLIIEH_	ENSG00000100522|ENST00000216410|GNPNAT1;ENST00000553987.1_1_14:53248483-53250189:-|nuORF	84.9155231211612	0.07920012719736333	1				NaN	NaN	0	NaN	5898	4471	10367
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10380	32.156	NaN	1212.8	30	0	206.89	0.144	+			36985	SINRTLFIQ	9	49	546.3146362304688	NaN	0	546.3146362304688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SINRTLFIQ_	ENST00000265277.9_1_10:112724403-112724514:+|nuORF	31.529811441608018	0.3183796599642538	1				NaN	NaN	0	NaN	5904	4474	10379
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10389	32.178	NaN	1866.6	30	0	203.3	0.214	+			20347	KESAEFQTQL	10	62	590.7959041197337	1179.5772553062673	2	590.796142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KESAEFQTQL_	ENSG00000047410|ENST00000367478|TPR;TPR|p.E1141Dfs*29|1|0.08|ENSG00000047410|chr1:186344085-186344086|-/CAGGTAAA|frameshift_variant;TPR|p.P2083Qfs*3|1|0.31|ENSG00000047410|chr1:186323735-186323735|G/-|frameshift_variant;TPR|p.T2133Lfs*63|1|0.03|ENSG00000047410|chr1:186322382-186322383|-/GTACTAATAAG|frameshift_variant;TPR|p.V1142Efs*26|1|0.08|ENSG00000047410|chr1:186344083-186344084|-/TT|frameshift_variant	89.56079334093651	0.1335884292564383	1				NaN	NaN	0	NaN	5910	4477	10388
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10390	32.181	NaN	3033.4	30	0	1079.4	0.106	+			14188	GSSAINILK	9	50	451.76873891846265	901.5229249037253	2	451.768798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSSAINILK_	ENSG00000167522|ENST00000301030|ANKRD11;ENST00000330736.9_1_16:89334888-89371640:-|nuORF	82.24051045832904	0.08786059719216216	1				NaN	NaN	0	NaN	5911	4477	10388
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10391	32.183	NaN	1485.9	30	0	163.23	0.035	+			21086	KKNRGLYR	8	55	517.8156562610666	1033.616759588933	2	517.815673828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KKNRGLYR_	ENSG00000160072|ENST00000673477|ATAD3B;ENSG00000215915|ENST00000378785|ATAD3C;ENST00000472194.6_1_1:1413873-1431194:+|nuORF;ENST00000474481.1_1_1:1421456-1424590:+|nuORF;ENST00000485748.5_1_1:1420203-1425183:+|nuORF;nc|ENSG00000160072|Q5T9A4-3|ATAD3B	25.450171626174864	0.7628259754767981	1				NaN	NaN	0	NaN	5912	4477	10388
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10397	32.199	NaN	1772.5	30	0	166.46	0.143	+			43187	TETVLRQAI	9	60	515.79843185178	1029.58231077036	2	515.7982788085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TETVLRQAI_	EEF2|p.E241Rfs*13|1|0.26|ENSG00000167658|chr19:3982316-3982316|C/-|frameshift_variant;ENSG00000167658|ENST00000309311|EEF2	40.77816245573522	0.41113185337114944	1				NaN	NaN	0	NaN	5915	4480	10396
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10403	32.217	NaN	2500	30	0	292.2	0.214	+			49674	VYKCLSENI	9	64	563.2834165792019	1124.5522802252037	2	563.28466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_VYKC(Carbamidomethyl (C))LSENI_	ENSG00000082898|ENST00000401558|XPO1;ENST00000428210.5_1_2:61705957-61719950:-|nuORF;ENST00000461407.5_1_2:61712881-61715780:-|nuORF	58.2462437865262	0.22823408064396822	1				NaN	NaN	0	NaN	5918	4483	10402
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10404	32.221	NaN	1075.3	30	0	134.27	0.035			+	36072	SEKAKLLLV	9	47	500.8233655625479	999.6321781918958	2	500.822998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEKAKLLLV_	REV__ENSG00000186976|ENST00000262726|EFCAB6;REV__nc|ENSG00000186976|Q5THR3-2|EFCAB6;REV__nc|ENSG00000186976|Q5THR3-3|EFCAB6;REV__nc|ENSG00000186976|Q5THR3-4|EFCAB6	31.529811441608018	0.5085848003137583	1				NaN	NaN	0	NaN	5919	4483	10402
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10410	32.237	NaN	1434.4	30	0	133.22	0.214	+			17745	IEQEQKLAL	9	55	536.3059435380488	1070.5973341428976	2	536.3055419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IEQEQKLAL_	ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2	49.536043120802724	0.308405419312776	1				NaN	NaN	0	NaN	5922	4486	10409
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10411	32.241	NaN	1602.4	30	0	224.32	0.036	+			5286	ATVIFVASQK	10	59	532.3114580309651	1062.6083631287302	2	532.3112182617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATVIFVASQK_	ENSG00000143493|ENST00000366994|INTS7;INTS7|p.F796Sfs*34|1|0.34|ENSG00000143493|chr1:211946635-211946635|A/-|frameshift_variant;nc|ENSG00000143493|Q9NVH2-2|INTS7;nc|ENSG00000143493|Q9NVH2-3|INTS7;nc|ENSG00000143493|Q9NVH2-4|INTS7	85.86182877749512	0.1547657473298402	1				NaN	NaN	0	NaN	5923	4486	10409
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10417	32.257	NaN	2493.1	30	0	439.56	0.214	+			19000	IVVEHIIMK	9	57	541.3252429255095	1080.635932917819	2	541.3262329101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IVVEHIIMK_	ENSG00000109133|ENST00000504986|TMEM33;TMEM33|p.L211P|1|0.2|ENSG00000109133|chr4:41954087-41954087|T/C|missense_variant	88.17693792209575	0.07000514020414955	1				NaN	NaN	0	NaN	5926	4489	10416
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10418	32.261	NaN	2257.4	30	0	256.47	0.106	+			2813	ASAAAALVLK	10	63	457.7867827467456	913.5590125602912	2	457.78692626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASAAAALVLK_	ENSG00000137076|ENST00000314888|TLN1;nc|ENSG00000137076|Q9Y490-2|TLN1;TLN1|p.P1628Rfs*20|1|0.44|ENSG00000137076|chr9:35707144-35707144|G/-|frameshift_variant	124.08010499294276	0.021567188538240013	1				NaN	NaN	0	NaN	5927	4489	10416
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10419	32.263	NaN	1683.6	30	0	246.51	0.106	+			2555	AQATISFPK	9	59	481.7682548742168	961.5219568152336	2	481.76837158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AQATISFPK_	CDC6|p.P86Lfs*17|1|0.14|ENSG00000094804|chr17:40291132-40291132|C/-|frameshift_variant;ENSG00000094804|ENST00000209728|CDC6	39.252832667884924	0.4290233611298554	1				NaN	NaN	0	NaN	5928	4489	10416
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10420	32.265	NaN	1259.6	30	0	163.4	0.106	+			18337	IQAAGPAHAGL	11	49	503.2768681244377	1004.5391833156755	2	503.2773132324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IQAAGPAHAGL_	ENSG00000124006|ENST00000404537|OBSL1;ENST00000465149.1_1_2:220420747-220435459:-|nuORF;nc|ENSG00000124006|O75147-1|OBSL1;nc|ENSG00000124006|O75147-4|OBSL1	35.61828744233558	0.616184410043185	1				NaN	NaN	0	NaN	5929	4489	10416
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10421	32.266	NaN	1522.2	30	0	286.64	0.038	+			46597	VFQQFDLEPS	10	43	605.291015879291	1208.5674788253818	2	605.2921142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VFQQFDLEPS_	C1R|p.P100Rfs*15|1|0.13|ENSG00000159403|chr12:7090181-7090181|G/-|frameshift_variant;C1R|p.P216Lfs*100|5|0.33|ENSG00000159403|chr12:7089414-7089414|G/-|frameshift_variant;ENSG00000159403|ENST00000647956|C1R;ENST00000536092.1_12:7243942-7244984:-|nuORF;ENST00000540394.2_12:7241870-7244269:-|nuORF;ENST00000545466.1_12:7242646-7244984:-|nuORF;nc|ENSG00000159403|P00736|C1R	25.57405402267927	0.6709832231498071	1				NaN	NaN	0	NaN	5930	4489	10416
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10426	32.281	NaN	1225.9	30	0	142.08	0.214	+			48472	VTLSVPNVSE	10	58	522.7821585309146	1043.549764128629	2	522.7827758789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTLSVPNVSE_	ENSG00000011454|ENST00000373647|RABGAP1;ENST00000317419.7_1_9:125719338-125751780:+|nuORF;nc|ENSG00000188394|Q9Y3P9-2|RABGAP1;nc|ENSG00000188394|Q9Y3P9-3|RABGAP1;nc|ENSG00000188394|Q9Y3P9-4|RABGAP1	29.170058357718403	0.6416167986984785	1				NaN	NaN	0	NaN	5932	4492	10425
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10427	32.285	NaN	1214.3	30	0	136.8	0.036			+	12801	GEMAALHVPL	10	53	527.2738078030208	1052.5330626728414	2	527.274169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_GEM(Oxidation (M))AALHVPL_	REV__ENSG00000137494|ENST00000533342|ANKRD42;REV__nc|ENSG00000137494|Q8N9B4|ANKRD42	73.97473282117947	0.24484687617201792	1				NaN	NaN	0	NaN	5933	4492	10425
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10432	32.299	NaN	2652.9	30	0	1055.8	0.214			+	26763	LVPYVHLLQ	9	51	361.2192499297897	1080.6359203895693	3	361.2192687988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LVPYVHLLQ_	REV__ENSG00000109452|ENST00000262992|INPP4B;REV__ENST00000512630.5_1_4:143007384-143094853:-|nuORF	34.172542307311794	0.4838870758800184	1				NaN	NaN	0	NaN	5935	4495	10431
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10433	32.303	NaN	2849.9	30	0	451.16	0.106	+			49377	VVSVILEQK	9	55	507.8135293085251	1013.6125056838503	2	507.81329345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVSVILEQK_	ANKFY1|p.P691Rfs*61|1|0.4|ENSG00000185722|chr17:4182230-4182230|G/-|frameshift_variant;ENSG00000185722|ENST00000341657|ANKFY1;nc|ENSG00000185722|Q9P2R3-2|ANKFY1;nc|ENSG00000185722|Q9P2R3-4|ANKFY1	98.58198989935565	0.04066992115528678	1				NaN	NaN	0	NaN	5936	4495	10431
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10434	32.305	NaN	5243.7	30	0	1178.1	0.106	+			51342	YSRSLLRV	8	52	331.8660102803132	992.5762014411397	3	331.8660583496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YSRSLLRV_	ENSG00000165632|ENST00000344293|TAF3;TAF3|p.S4T|1|0.05|ENSG00000165632|chr10:7818720-7818720|G/C|missense_variant	31.529811441608018	0.715883593221515	1				NaN	NaN	0	NaN	5937	4495	10431
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10435	32.307	NaN	1472.8	30	0	210.14	0.106	+			5929	AVLGFFAPLL	10	38	349.8781618164542	NaN	0	349.8779296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVLGFFAPLL_	ENSG00000162009|ENST00000689027|SSTR5	31.529811441608018	0.39664753963064203	1				NaN	NaN	0	NaN	5938	4495	10431
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10436	32.308	NaN	941.67	30	0	118.41	0.106	+			18054	IIVGNPKAL	9	40	462.79693142888493	NaN	0	462.7963562011719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IIVGNPKAL_	ENSG00000005007|ENST00000262803|UPF1;ENST00000600689.1_1_19:18974163-18976510:+|nuORF;nc|ENSG00000005007|Q92900|UPF1	45.9519527083369	0.2345902329052062	1				NaN	NaN	0	NaN	5939	4495	10431
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10437	32.31	NaN	1265.6	30	0	99.675	0.106	+			49117	VVLLVINHK	9	59	517.8389282226562	NaN	0	517.8389282226562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VVLLVINHK_	ENSG00000112697|ENST00000230461|TMEM30A;nc|ENSG00000112697|Q9NV96-2|TMEM30A;nc|ENSG00000112697|Q9NV96-3|TMEM30A	40.5726180659479	0.27166212580479165	1				NaN	NaN	0	NaN	5940	4495	10431
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10438	32.312	NaN	1121.4	30	0	112.76	0.034			+	17875	IGAIVLGGIQ	10	52	470.7949582764592	939.5753636197185	2	470.7950134277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IGAIVLGGIQ_	REV__ENSG00000266964|ENST00000351325|FXYD1;REV__ENST00000587056.1_1_19:35630914-35632121:+|nuORF;REV__ENST00000592818.5_1_19:35629760-35632121:+|nuORF	38.80614096846853	0.5601458937078225	1				NaN	NaN	0	NaN	5941	4495	10431
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10445	32.33	NaN	4646.7	30	0	659.57	0.215			+	8057	DVGDLEKAAL	10	62	515.7742968923138	1029.5340408514276	2	515.7742309570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DVGDLEKAAL_	REV__MYO19|p.E836D|1|0.33|ENSG00000278259|chr17:36498515-36498515|T/A|missense_variant	47.95952297671804	0.47580206326914537	1				NaN	NaN	0	NaN	5945	4498	10444
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10446	32.333	NaN	1419.9	30	0	142.61	0.033	+			1735	AHLTVACL	8	44	442.7365976650123	883.4586423968246	2	442.73712158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_AHLTVAC(Carbamidomethyl (C))L_	sp|F5HE69|US18_HCMVMTransmembraneproteinUS18OS=Humancytomegalovirus(strainMerlin)OX=295027GN=US18PE=3SV=1;sp|P69334|US18_HCMVATransmembraneproteinUS18OS=Humancytomegalovirus(strainAD169)OX=10360GN=US18PE=3SV=1	54.76467175910256	0.5536104764165384	1				NaN	NaN	0	NaN	5946	4498	10444
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10452	32.35	NaN	4635.5	30	0	909.7	0.214			+	49387	VVTEAIGQVT	10	67	508.7847029233647	1015.5548529135294	2	508.78485107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVTEAIGQVT_	REV__tr|U7STZ3|U7STZ3_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01040PE=4SV=1	58.2462437865262	0.38179041844353556	1				NaN	NaN	0	NaN	5949	4501	10451
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10453	32.353	NaN	2011.7	30	0	814.94	0.106			+	23844	LDAGVVLAR	9	44	457.2768608520193	912.5391687708386	2	457.2765808105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LDAGVVLAR_	REV__ENSG00000113396|ENST00000262462|SLC27A6	30.503639358989545	0.5181749237905803	1				NaN	NaN	0	NaN	5950	4501	10451
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10454	32.355	NaN	2010.2	30	0	187.08	0.106			+	24105	LEKLGATLS	9	58	466.2767680715015	930.5389832098031	2	466.27642822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LEKLGATLS_	REV__ENSG00000086015|ENST00000361297|MAST2;REV__MAST2|p.R1274Dfs*9|1|0.49|ENSG00000086015|chr1:46034213-46034213|C/-|frameshift_variant;REV__nc|ENSG00000086015|Q6P0Q8-2|MAST2	115.49404669440601	0.023927554121326553	1				NaN	NaN	0	NaN	5951	4501	10451
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10455	32.357	NaN	2228.9	30	0	341.97	0.106			+	37853	SNNLSQALSL	10	47	523.7774138538535	1045.540274774507	2	523.7784423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SNNLSQALSL_	REV__ENSG00000100154|ENST00000397906|TTC28;REV__TTC28|p.A2381Lfs*5|1|0.15|ENSG00000100154|chr22:27982526-27982526|C/-|frameshift_variant;REV__TTC28|p.D729Rfs*10|1|0.19|ENSG00000100154|chr22:28107660-28107661|-/T|frameshift_variant;REV__TTC28|p.P1795Qfs*108|1|0.33|ENSG00000100154|chr22:27993379-27993379|G/-|frameshift_variant;REV__TTC28|p.V1305Wfs*29|1|0.31|ENSG00000100154|chr22:28094099-28094099|C/-|frameshift_variant	47.95952297671804	0.47580206326914537	1				NaN	NaN	0	NaN	5952	4501	10451
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10456	32.359	NaN	2940.9	30	0	779.69	0.106				-1	YAAIRAECK	9	37	361.1868890443018	1080.5388377331053	3	361.1868896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_YAAIRAEC(Carbamidomethyl (C))K_	nc|ENSG00000057935|Q9BTC8-2|MTA3	32.81241826257853	0.4965981579233955	1				NaN	NaN	0	NaN	5953	4501	10451
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10457	32.361	NaN	1520.6	30	0	212.26	0.106			+	8020	DTNWKETF	8	64	520.7373136527704	1039.4600743723406	2	520.7378540039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DTNWKETF_	REV__ENSG00000165637|ENST00000332211|VDAC2;REV__ENSG00000213585|ENST00000265333|VDAC1;REV__ENST00000430995.1_1_1:118183812-118184055:-|nuORF;REV__ENST00000466080.1_1_5:133324828-133328703:-|nuORF;REV__ENST00000468285.1_1_10:76973815-76980729:+|nuORF;REV__ENST00000481876.5_1_10:76970916-76978982:+|nuORF;REV__nc|ENSG00000165637|P45880-1|VDAC2;REV__nc|ENSG00000165637|P45880-2|VDAC2	87.75429964447693	0.2842685068779738	1				NaN	NaN	0	NaN	5954	4501	10451
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10458	32.362	NaN	919.36	30	0	115.19	0.035			+	43252	TEWRAARL	8	48	501.7768903412595	NaN	0	501.7778625488281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TEWRAARL_	REV__ENST00000411637.6_2_9:134000990-134001116:+|nuORF	44.116797842482775	1.7418937515398478	1				NaN	NaN	0	NaN	5955	4501	10451
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10466	32.381	NaN	4716.5	30	0	818.22	0.214	+			2556	AQATISFPK	9	68	481.7682548742168	961.5219568152336	2	481.7684020996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AQATISFPK_	CDC6|p.P86Lfs*17|1|0.14|ENSG00000094804|chr17:40291132-40291132|C/-|frameshift_variant;ENSG00000094804|ENST00000209728|CDC6	41.42661286455405	0.403525789677298	1				NaN	NaN	0	NaN	5960	4504	10465
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10467	32.385	NaN	4576.7	30	0	734.84	0.106	+			2557	AQATISFPK	9	67	481.7682548742168	961.5219568152336	2	482.2700500488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AQATISFPK_	CDC6|p.P86Lfs*17|1|0.14|ENSG00000094804|chr17:40291132-40291132|C/-|frameshift_variant;ENSG00000094804|ENST00000209728|CDC6	58.22992032128504	0.22837015374068087	1				NaN	NaN	0	NaN	5961	4504	10465
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10468	32.386	NaN	2773.1	30	0	586.88	0.106	+			14701	GTIGLTIAK	9	53	437.27372518425835	872.5328974353167	2	437.2732849121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTIGLTIAK_	ENSG00000112992|ENST00000344920|NNT	93.1432384553994	0.056003526918089595	1				NaN	NaN	0	NaN	5962	4504	10465
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10469	32.388	NaN	763.92	30	0	123.37	0.034	+			48355	VTGPLVLNR	9	46	484.79767556944586	NaN	0	485.25360107421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTGPLVLNR_	ENSG00000089009|ENST00000202773|RPL6;ENST00000456481.1_1_7:137407104-137407545:+|nuORF;ENST00000489915.1_1_18:6462145-6462637:-|nuORF;ENST00000553205.1_1_12:112843569-112844143:-|nuORF;RPL6|p.K237Rfs*4|1|0.04|ENSG00000089009|chr12:112405856-112405857|TT/-|frameshift_variant	51.33545320467046	0.19748963086191895	1				NaN	NaN	0	NaN	5963	4504	10465
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10474	32.403	NaN	10682	30	0	1797.3	0.214	+			34853	RYSSMAASF	9	67	510.2343778021269	1018.4542026710538	2	510.2345275878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RYSSMAASF_	ENSG00000162366|ENST00000294338|PDZK1IP1	85.16082228582465	0.07850854922700509	1				NaN	NaN	0	NaN	5965	4507	10473
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10475	32.406	NaN	1992.3	30	0	172.36	0.106			+	24906	LKNNIFSS	8	49	461.7531406087577	921.4917282843154	2	461.7529602050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LKNNIFSS_	REV__ENST00000347869.7_1_3:50144979-50147044:+|nuORF	63.30626980617807	0.4690498839812213	1				NaN	NaN	0	NaN	5966	4507	10473
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10476	32.408	NaN	1437.9	30	0	131.61	0.106			+	7068	CVCWRIAF	8	47	527.7522800928028	NaN	0	527.7528076171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_CVC(Carbamidomethyl (C))WRIAF_	REV__ENST00000556036.5_2_14:45605535-45605673:+|nuORF	42.47446043378293	1.7418937515398478	1				NaN	NaN	0	NaN	5967	4507	10473
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10477	32.41	NaN	1722	30	0	590.44	0.035	+			26556	LTSKLHSSL	9	42	493.28732787739625	984.5601028215925	2	493.28643798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LTSKLHSSL_	ENSG00000080200|ENST00000389622|CRYBG3;nc|ENSG00000080200|Q68DQ2-1|CRYBG3	25.57405402267927	0.5642445186134241	1				NaN	NaN	0	NaN	5968	4507	10473
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10483	32.426	NaN	1312.6	30	0	85.142	0.214			+	24584	LGPLPGGNTL	10	54	469.76890080129164	937.5232486693833	2	469.7686767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LGPLPGGNTL_	REV__ENSG00000145214|ENST00000273814|DGKQ	71.87747018426188	0.26198133118427214	1				NaN	NaN	0	NaN	5971	4510	10482
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10484	32.43	NaN	1657.2	30	0	160.87	0.106				-1	LGAVCCPER	9	42	502.7379306874811	1003.4613084417622	2	502.73876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LGAVCC(Carbamidomethyl (C))PER_	ENST00000537045.5_1_22:19025899-19026076:-|nuORF	31.954861631926434	0.5046124803899898	1				NaN	NaN	0	NaN	5972	4510	10482
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10485	32.432	NaN	1217.9	30	0	144.72	0.106				-1	SVFGTMPLK	9	44	498.2648508361433	994.5151487390866	2	498.2651672363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_SVFGTM(Oxidation (M))PLK_	ENSG00000151348|ENST00000533608|EXT2;nc|ENSG00000151348|Q93063-2|EXT2;nc|ENSG00000151348|Q93063-3|EXT2	39.252832667884924	0.4290233611298554	1				NaN	NaN	0	NaN	5973	4510	10482
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10486	32.434	NaN	757.37	30	0	100.54	0.032			+	13355	GKVTPKTG	8	41	394.23753730551425	NaN	0	394.23760986328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GKVTPKTG_	REV__ENSG00000054690|ENST00000329153|PLEKHH1;REV__ENST00000558981.5_1_14:68038444-68042282:+|nuORF;REV__nc|ENSG00000054690|Q9ULM0-2|PLEKHH1	37.15910966729921	1.7418937515398478	1				NaN	NaN	0	NaN	5974	4510	10482
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10494	32.452	NaN	1986.3	30	0	247.72	0.213	+			41260	SVLIQKQIFK	10	66	602.3765258789062	NaN	0	602.3765258789062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVLIQKQIFK_	ENSG00000205339|ENST00000379719|IPO7;ENST00000528833.1_1_11:9431619-9435997:+|nuORF;IPO7|p.D430Mfs*6|1|0.18|ENSG00000205339|chr11:9425208-9425208|A/-|frameshift_variant;IPO7|p.M511Cfs*3|1|0.19|ENSG00000205339|chr11:9429134-9429134|A/-|frameshift_variant	68.62578634547417	0.1638387020055689	1				NaN	NaN	0	NaN	5979	4513	10493
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10495	32.455	NaN	1545.2	30	0	203.48	0.106			+	26979	LYLLGQLGDY	10	42	577.8104248046875	NaN	0	577.8104248046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LYLLGQLGDY_	REV__ENSG00000141540|ENST00000269346|TTYH2;REV__nc|ENSG00000141540|Q9BSA4-2|TTYH2	19.1035232394073	0.4201028297492154	1				NaN	NaN	0	NaN	5980	4513	10493
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10496	32.457	NaN	1892.3	30	0	169.16	0.035			+	-1	LTASGSGCVY	10	59	507.73172302379766	1013.4488931143953	2	507.7315979003906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LTASGSGC(Carbamidomethyl (C))VY_	REV__ENST00000336083.7_1_11:73471964-73472084:-|nuORF	37.15910966729921	0.575322462179216	1				NaN	NaN	0	NaN	5981	4513	10493
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10504	32.477	NaN	4699.7	30	0	1028.4	0.214	+			28171	NAPLVHATL	9	47	468.2690426410542	934.5235323489085	2	468.2688293457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAPLVHATL_	ENSG00000082898|ENST00000401558|XPO1;ENST00000428210.5_1_2:61720980-61752425:-|nuORF	47.657333605630114	0.33044192980041115	1				NaN	NaN	0	NaN	5986	4516	10503
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10505	32.481	NaN	3469.4	30	0	1001.3	0.106	+			19184	IYTNLNQKI	9	63	553.8135652438446	1105.612577554489	2	554.31494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IYTNLNQKI_	ENSG00000144036|ENST00000272427|EXOC6B;nc|ENSG00000144036|Q9Y2D4-2|EXOC6B	85.16082228582465	0.07850854922700509	1				NaN	NaN	0	NaN	5987	4516	10503
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10506	32.483	NaN	1855.8	30	0	245.12	0.106	+			36367	SETDMVRQI	9	54	539.7634019761247	1077.5122510190492	2	539.7647094726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SETDMVRQI_	ENSG00000149823|ENST00000279281|VPS51	62.107414245175825	0.1960472003779324	1				NaN	NaN	0	NaN	5988	4516	10503
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10507	32.484	NaN	2435.6	30	0	378.06	0.035			+	3186	ASKKIEGKF	9	43	336.5341482902892	1006.5806154710676	3	336.5343322753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASKKIEGKF_	REV__tr|U7SUA5|U7SUA5_FUSNUOligopeptidaseFOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01160PE=3SV=1	20.94693142431847	0.6074874384046576	1				NaN	NaN	0	NaN	5989	4516	10503
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10519	32.522	NaN	1772.7	30	0	194.33	0.214			+	20497	KFCILINRSV	10	61	596.8472023980329	1191.6798518628657	2	596.8468627929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KFCILINRSV_	REV__ENST00000546044.1_1_12:122372233-122387003:+|nuORF	34.08650109265054	0.601467140718965	1				NaN	NaN	0	NaN	5995	4522	10518
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10520	32.525	NaN	1939.5	30	0	315.21	0.106	+			500	ACFEPANQMVK	11	58	619.2886517894857	1236.5627506457713	2	619.28857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ACFEPANQMVK_	ENSG00000075886|ENST00000321253|TUBA3D;ENSG00000123416|ENST00000336023|TUBA1B;ENSG00000127824|ENST00000248437|TUBA4A;ENSG00000152086|ENST00000312988|TUBA3E;ENSG00000167552|ENST00000301071|TUBA1A;ENSG00000167553|ENST00000301072|TUBA1C;ENSG00000198033|ENST00000400113|TUBA3C;nc|ENSG00000123416|P68363-2|TUBA1B;nc|ENSG00000127824|P68366-2|TUBA4A;nc|ENSG00000167552|Q71U36-2|TUBA1A;nc|ENSG00000198033|P0DPH7-2|TUBA3C;TUBA3C|p.T361Rfs*18|1|0.17|ENSG00000198033|chr13:19174136-19174136|G/-|frameshift_variant;TUBA3D|p.G366Efs*13|1|0.17|ENSG00000075886|chr2:131482588-131482588|G/-|frameshift_variant;TUBA3D|p.V328Pfs*54|1|0.45|ENSG00000075886|chr2:131480665-131480666|-/CCCAAAGA|frameshift_variant	58.22992032128504	0.3392555181951113	1				NaN	NaN	0	NaN	5996	4522	10518
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10521	32.527	NaN	1252.8	30	0	176.27	0.036	+			47047	VLFAPSNNVL	10	39	537.3011664704815	1072.5877800077628	2	537.3010864257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VLFAPSNNVL_	tr|U7T730|U7T730_FUSNUMajorcapsidproteinEOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00096PE=4SV=1	39.252832667884924	0.5560298534376815	1				NaN	NaN	0	NaN	5997	4522	10518
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10525	32.541	NaN	2158.1	30	0	324.2	0.214	+			41505	SVPLNIQGL	9	58	470.7766312978748	939.5387096625496	2	470.7768249511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVPLNIQGL_	ENSG00000147548|ENST00000317025|NSD3;nc|ENSG00000147548|Q9BZ95-2|NSD3;nc|ENSG00000147548|Q9BZ95-4|NSD3;nc|ENSG00000147548|Q9BZ95-5|NSD3	34.172542307311794	0.4838870758800184	1				NaN	NaN	0	NaN	5998	4525	10524
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10526	32.545	NaN	1104.2	30	0	164.8	0.034	+			46218	VEAIGLLGGQ	10	41	478.7727833877462	NaN	0	478.7724609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VEAIGLLGGQ_	ENSG00000162607|ENST00000339950|USP1;USP1|p.K673T|1|0.17|ENSG00000162607|chr1:62450641-62450641|A/C|missense_variant	31.529811441608018	0.39664753963064203	1				NaN	NaN	0	NaN	5999	4525	10524
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10531	32.56	NaN	2827.2	30	0	506.59	0.214	+			16888	HPIEGSTTVF	10	58	544.2745121806614	1086.5344714281227	2	544.2753295898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HPIEGSTTVF_	ENSG00000169710|ENST00000306749|FASN	51.33545320467046	0.4446945571623749	1				NaN	NaN	0	NaN	6001	4528	10530
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10532	32.563	NaN	1641.3	30	0	345.04	0.106	+			27354	MINIKSIPK	9	58	522.3165967745014	1042.6186406158026	2	522.3165893554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MINIKSIPK_	ENSG00000123545|ENST00000316149|NDUFAF4	34.172542307311794	0.4838870758800184	1				NaN	NaN	0	NaN	6002	4528	10530
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10533	32.565	NaN	804.96	30	0	98.064	0.106			+	17119	HSLTPLSSAI	10	35	513.2848116432697	1024.5550703533393	2	513.2838745117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HSLTPLSSAI_	REV__ENST00000451737.1_1_10:96990486-96990897:-|nuORF	21.9598887501803	0.7004979571547932	1				NaN	NaN	0	NaN	6003	4528	10530
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10534	32.567	NaN	916.98	30	0	129.16	0.034			+	23532	LAIGQKKY	8	35	460.7817724708119	919.5489920084239	2	460.7810974121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LAIGQKKY_	REV__ENSG00000148158|ENST00000374232|SNX30	33.51558372728122	0.7005509609380386	1				NaN	NaN	0	NaN	6004	4528	10530
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10542	32.585	NaN	1663.4	30	0	335.25	0.214	+			7322	DATIVVKSY	9	55	498.2740147617702	994.5334765903405	2	498.2738037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DATIVVKSY_	ENSG00000130762|ENST00000378378|ARHGEF16	90.60085204095205	0.06317133949006545	1				NaN	NaN	0	NaN	6009	4531	10541
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10543	32.589	NaN	2280.3	30	0	258.39	0.106	+			14352	GTAALGCLVK	10	61	495.27556615960157	988.5365793860032	2	495.275634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GTAALGC(Carbamidomethyl (C))LVK_	ENST00000390555.3_1_14:106135325-106136152:-|nuORF;nc|ENSG00000211896|P01857-1|IGHG1;nc|ENSG00000211896|P01857|IGHG1;nc|ENSG00000211897|P01860-1|IGHG3;nc|ENSG00000211897|P01860|IGHG3	85.16082228582465	0.15877915086237185	1				NaN	NaN	0	NaN	6010	4531	10541
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10544	32.591	NaN	1779.6	30	0	309.78	0.106	+			43842	TLTIQNVL	8	44	451.27084518208244	900.5271374309649	2	451.2708435058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TLTIQNVL_	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42|TTN;TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant;TTN|p.V27442Cfs*4|1|0.05|ENSG00000155657|chr2:178558107-178558108|-/A|frameshift_variant	38.80614096846853	0.6637206697844082	1				NaN	NaN	0	NaN	6011	4531	10541
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10545	32.593	NaN	909.77	30	0	123.11	0.106			+	23586	LALVRDEF	8	47	481.7682548742168	961.5219568152336	2	481.80572509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LALVRDEF_	REV__ENSG00000186648|ENST00000342740|CARMIL3	31.954861631926434	0.7126016770032289	1				NaN	NaN	0	NaN	6012	4531	10541
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10546	32.594	NaN	1032.6	30	0	112.9	0.035			+	24812	LIPAGPLNNE	10	45	519.2849039948318	1036.5552550564635	2	519.2863159179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LIPAGPLNNE_	REV__ENSG00000240184|ENST00000308177|PCDHGC3;REV__nc|ENSG00000240184|Q9UN70-2|PCDHGC3;REV__PCDHGC3|p.F556Lfs*34|1|0.18|ENSG00000240184|chr5:141477782-141477782|T/-|frameshift_variant;REV__PCDHGC3|p.N689Ifs*10|6|0.29|ENSG00000240184|chr5:141478175-141478175|A/-|frameshift_variant	27.047317107675042	0.6589519614906109	1				NaN	NaN	0	NaN	6013	4531	10541
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10557	32.629	NaN	1893.5	30	0	202.35	0.145	+			8396	EANQHELLY	9	46	558.7694300484541	1115.524307163708	2	558.7694702148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EANQHELLY_	ENSG00000153029|ENST00000367580|MR1;ENST00000367578.1_1_1:181003164-181019478:+|nuORF;ENST00000438435.6_1_1:181006220-181024398:+|nuORF;MR1|p.P230Qfs*5|1|0.22|ENSG00000153029|chr1:181052314-181052314|C/-|frameshift_variant;nc|ENSG00000153029|Q95460-2|MR1;nc|ENSG00000153029|Q95460-3|MR1;nc|ENSG00000153029|Q95460-4|MR1;nc|ENSG00000153029|Q95460-5|MR1	55.50420428727701	0.2510918378945873	1				NaN	NaN	0	NaN	6018	4537	10556
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10565	32.651	NaN	1807.8	30	0	154.24	0.214	+			8830	EELQGVRSL	9	60	515.7795101341319	NaN	0	515.7796630859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EELQGVRSL_	ENSG00000148843|ENST00000369797|PDCD11	96.0336014099291	0.029433397039169355	1				NaN	NaN	0	NaN	6023	4540	10564
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10566	32.654	NaN	1356	30	0	165.18	0.106	+			39806	STLESIYQR	9	56	548.7855853951736	NaN	0	548.7854614257812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STLESIYQR_	ENSG00000166888|ENST00000300134|STAT6;ENST00000555641.1_1_12:57499966-57502061:-|nuORF;STAT6|p.G815Efs*27|3|0.31|ENSG00000166888|chr12:57096672-57096672|C/-|frameshift_variant	52.936696900407355	0.1864545979552969	1				NaN	NaN	0	NaN	6024	4540	10564
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10567	32.656	NaN	1854.8	30	0	115.43	0.106			+	38532	SSDLLFLLERT	11	73	647.3562348152611	NaN	0	647.3565063476562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSDLLFLLERT_	REV__ENSG00000145198|ENST00000691901|VWA5B2;REV__ENST00000461141.5_1_3:183952309-183959823:+|nuORF;REV__VWA5B2|p.V1061Gfs*60|1|0.12|ENSG00000145198|chr3:184241398-184241399|-/C|frameshift_variant	49.46582953369473	0.3191553428975593	1				NaN	NaN	0	NaN	6025	4540	10564
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10568	32.658	NaN	1339	30	0	144.62	0.036	+			27592	MPLCWSKPC	9	48	532.7418752079909	NaN	0	532.7416381835938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MPLCWSKPC_	CRB1|p.P1400Lfs*6|1|0.36|ENSG00000134376|chr1:197477853-197477853|C/-|frameshift_variant;ENSG00000134376|ENST00000367400|CRB1;ENST00000475659.1_1_1:197237491-197326220:+|nuORF;nc|ENSG00000134376|P82279-2|CRB1;nc|ENSG00000134376|P82279-5|CRB1	47.91560031466742	0.22105767942158736	1				NaN	NaN	0	NaN	6026	4540	10564
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10575	32.676	NaN	1590.8	30	0	166.05	0.214	+			12400	GEAEGLMKV	9	49	467.238974476188	932.463396019176	2	467.2384948730469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEAEGLMKV_	ENSG00000157637|ENST00000374759|SLC38A10;nc|ENSG00000157637|Q9HBR0-2|SLC38A10;nc|ENSG00000157637|Q9HBR0-3|SLC38A10;SLC38A10|p.R413W|1|0.54|ENSG00000157637|chr17:81260289-81260289|G/A|missense_variant	44.377184641726394	0.36891676396732553	1				NaN	NaN	0	NaN	6030	4543	10574
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10576	32.68	NaN	3565.4	30	0	668.58	0.106	+			1314	AETELINRV	9	59	522.7882961772752	NaN	0	522.7884521484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AETELINRV_	ENSG00000134215|ENST00000370056|VAV3;ENST00000343258.8_1_1:108115955-108328118:-|nuORF;ENST00000525460.5_1_1:108115955-108220600:-|nuORF;nc|ENSG00000134215|Q9UKW4-2|VAV3;nc|ENSG00000134215|Q9UKW4-3|VAV3;nc|ENSG00000134215|Q9UKW4-4|VAV3	69.6276240434122	0.10825701912424071	1				NaN	NaN	0	NaN	6031	4543	10574
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10577	32.682	NaN	1584.7	30	0	158.1	0.035			+	9633	ELRKETYV	8	50	519.2849039948318	1036.5552550564635	2	520.2874755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ELRKETYV_	REV__ENSG00000173988|ENST00000595396|LRRC63;REV__LRRC63|p.N148S|1|0.15|ENSG00000173988|chr13:46227869-46227869|A/G|missense_variant	23.52269567125451	0.777708487568066	1				NaN	NaN	0	NaN	6032	4543	10574
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10586	32.703	NaN	9137.1	30	0	993	0.214	+			12614	GEIDGNKVTL	10	65	523.2799659414297	1044.5453789496594	2	523.281494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEIDGNKVTL_	ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232319904-232323320:-|nuORF	79.48907831485694	0.19979514868675113	1				NaN	NaN	0	NaN	6038	4546	10585
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10587	32.707	NaN	3922.7	30	0	447.4	0.106			+	25672	LRDWAEVI	8	53	501.27443724575704	1000.5343215583141	2	501.27398681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LRDWAEVI_	REV__TUBAL3|p.A396D|1|0.48|ENSG00000178462|chr10:5393671-5393671|G/T|missense_variant	37.15910966729921	0.6739408393984688	1				NaN	NaN	0	NaN	6039	4546	10585
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10588	32.709	NaN	1500.8	30	0	115.68	0.106	+			50418	YAATIASKL	9	57	469.2714611770514	936.5283694209028	2	469.27130126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YAATIASKL_	ENSG00000102554|ENST00000377687|KLF5;nc|ENSG00000102554|Q13887-2|KLF5;nc|ENSG00000102554|Q13887-4|KLF5	72.87924865735499	0.12833875048249987	1				NaN	NaN	0	NaN	6040	4546	10585
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10589	32.711	NaN	2008.3	30	0	754.87	0.106			+	-1	PLPALCRPA	9	44	497.7792461991908	993.5439394651817	2	497.7790222167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_PLPALC(Carbamidomethyl (C))RPA_	REV__ENST00000481848.6_2_6:127836176-127837095:-|nuORF	25.450171626174864	0.5654022654467333	1				NaN	NaN	0	NaN	6041	4546	10585
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10590	32.712	NaN	1805.5	30	0	198.94	0.106	+			13021	GEVLISRV	8	45	436.76347197519794	871.5123910171959	2	436.7627868652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GEVLISRV_	AP2M1|p.I386Hfs*6|1|0.17|ENSG00000161203|chr3:184182844-184182845|-/C|frameshift_variant;ENSG00000161203|ENST00000292807|AP2M1;ENST00000466598.5_1_3:183894781-183896942:+|nuORF;ENST00000472560.5_1_3:183894781-183898834:+|nuORF;ENST00000484469.5_1_3:183894781-183895400:+|nuORF;ENST00000487958.5_1_3:183894781-183898060:+|nuORF;nc|ENSG00000161203|Q96CW1-2|AP2M1	87.69643885390035	0.28444366722805053	1				NaN	NaN	0	NaN	6042	4546	10585
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10591	32.714	NaN	1024.7	30	0	199.2	0.106			+	51541	YYCEQDGHF	9	45	581.2212524414062	NaN	0	581.2212524414062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YYCEQDGHF_	REV__ENSG00000148835|ENST00000369839|TAF5;REV__nc|ENSG00000148835|Q15542-2|TAF5;REV__TAF5|p.F374Lfs*4|1|0.34|ENSG00000148835|chr10:103379611-103379611|T/-|frameshift_variant	15.641811463095205	0.38404136392510424	1				NaN	NaN	0	NaN	6043	4546	10585
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10592	32.716	NaN	1262.6	30	0	106.81	0.034	+			27442	MLIGILHM	8	49	464.26059212789653	NaN	0	464.26031494140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MLIGILHM_	ENSG00000136891|ENST00000374902|TEX10;nc|ENSG00000136891|Q9NXF1-2|TEX10	43.626045697637714	1.7418937515398478	1				NaN	NaN	0	NaN	6044	4546	10585
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10600	32.736	NaN	1375.4	30	0	491.73	0.214			+	22139	KSQAKDGL	8	34	423.73723764981264	NaN	0	423.7377014160156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSQAKDGL_	REV__ENST00000431775.1_1_20:1141365-1141542:+|nuORF	35.61828744233558	1.7418937515398478	1				NaN	NaN	0	NaN	6049	4549	10599
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10601	32.739	NaN	1262.2	30	0	212.93	0.106	+			11376	FLLFLLMY	8	52	530.3016565310181	1058.5887601288362	2	530.3017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FLLFLLMY_	ENSG00000171942|ENST00000305899|OR10H2;ENSG00000172519|ENST00000642092|OR10H5;ENSG00000186723|ENST00000641419|OR10H1;OR10H1|p.L130Cfs*7|1|0.22|ENSG00000186723|chr19:15807650-15807650|G/-|frameshift_variant;OR10H2|p.L130Cfs*7|1|0.18|ENSG00000171942|chr19:15728427-15728427|C/-|frameshift_variant;OR10H5|p.L130Cfs*7|1|0.31|ENSG00000172519|chr19:15794432-15794432|C/-|frameshift_variant;OR10H5|p.T38M|1|0.11|ENSG00000172519|chr19:15794161-15794161|C/T|missense_variant	33.49298260027079	0.7007254697536482	1				NaN	NaN	0	NaN	6050	4549	10599
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10602	32.741	NaN	2266.8	30	0	577.03	0.106	+			40120	STPLAGLAPK	10	52	477.78437544870394	953.5541979642079	2	477.7835998535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STPLAGLAPK_	BAZ2A|p.K1507Qfs*26|1|0.27|ENSG00000076108|chr12:56600770-56600771|-/G|frameshift_variant;ENSG00000076108|ENST00000549884|BAZ2A;nc|ENSG00000076108|Q9UIF9-2|BAZ2A;nc|ENSG00000076108|Q9UIF9-3|BAZ2A;nc|ENSG00000076108|Q9UIF9|BAZ2A	26.69291269510374	0.6618461711292317	1				NaN	NaN	0	NaN	6051	4549	10599
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10603	32.743	NaN	1549	30	0	195.52	0.034	+			12884	GERPFKCL	8	51	475.24960751654083	948.4846620998817	2	475.2499694824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GERPFKCL_	ENSG00000197714|ENST00000360338|ZNF460;nc|ENSG00000197714|Q14592-2|ZNF460;ZNF460|p.Y476Mfs*57|1|0.28|ENSG00000197714|chr19:57291964-57291964|C/-|frameshift_variant	35.200714571348534	0.6875396545722289	1				NaN	NaN	0	NaN	6052	4549	10599
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10610	32.761	NaN	2787	30	0	406.24	0.214	+			44264	TSALPIIQK	9	56	485.8000719845304	969.5855910358608	2	485.8004150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSALPIIQK_	ENSG00000147872|ENST00000276914|PLIN2;ENST00000472715.1_1_9:19126103-19127487:-|nuORF;ENST00000475923.1_1_9:19126103-19126313:-|nuORF;PLIN2|p.V348*|1|0.15|ENSG00000147872|chr9:19116520-19116520|C/-|frameshift_variant	56.72105179125745	0.24094814563026265	1				NaN	NaN	0	NaN	6056	4552	10609
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10611	32.765	NaN	2585.6	30	0	529.73	0.036			+	-1	QEGRFAMTL	9	53	534.7607002830938	1067.5068476329875	2	535.2610473632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_QEGRFAM(Oxidation (M))TL_	REV__ASAP1|p.P792Lfs*20|1|0.1|ENSG00000153317|chr8:130112120-130112120|G/-|frameshift_variant;REV__ENSG00000153317|ENST00000518721|ASAP1;REV__nc|ENSG00000153317|Q9ULH1-2|ASAP1	40.77816245573522	0.41113185337114944	1				NaN	NaN	0	NaN	6057	4552	10609
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10621	32.786	NaN	1710.2	30	0	358.92	0.214	+			43015	TEKQYIATI	9	62	533.792711496784	NaN	0	533.7923583984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEKQYIATI_	ENSG00000155561|ENST00000285968|NUP205;NUP205|p.F1204Lfs*34|1|0.12|ENSG00000155561|chr7:135617163-135617163|T/-|frameshift_variant;NUP205|p.Q1211Kfs*27|1|0.25|ENSG00000155561|chr7:135617188-135617188|C/-|frameshift_variant	56.43379154798735	0.16452882468284893	1				NaN	NaN	0	NaN	6064	4555	10620
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10622	32.79	NaN	1444.5	30	0	230.83	0.037	+			10627	EYNSDLHQF	9	44	576.7509256673534	1151.4872984015067	2	576.7518310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EYNSDLHQF_	BUB1|p.V819Gfs*61|1|0.11|ENSG00000169679|chr2:110642126-110642127|-/C|frameshift_variant;ENSG00000169679|ENST00000302759|BUB1;ENST00000465029.5_1_2:111419157-111435602:-|nuORF;nc|ENSG00000169679|O43683-2|BUB1;nc|ENSG00000169679|O43683-3|BUB1	54.776311868738084	0.25715957988447635	1				NaN	NaN	0	NaN	6065	4555	10620
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10631	32.812	NaN	4384.8	30	0	2046.4	0.214	+			39561	STGHVGFIFK	10	46	364.8660489203887	1091.5763173613661	3	364.8662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STGHVGFIFK_	ENSG00000137575|ENST00000260130|SDCBP;ENST00000523441.1_1_8:59490633-59492419:+|nuORF;nc|ENSG00000137575|O00560-2|SDCBP;nc|ENSG00000137575|O00560-3|SDCBP	34.172542307311794	0.6007644933930345	1				NaN	NaN	0	NaN	6071	4558	10630
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10632	32.815	NaN	1790.2	30	0	196.86	0.106	+			34854	RYSSMAASF	9	53	510.2343778021269	1018.4542026710538	2	510.23486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RYSSMAASF_	ENSG00000162366|ENST00000294338|PDZK1IP1	45.97224482568171	0.3502073465782774	1				NaN	NaN	0	NaN	6072	4558	10630
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10633	32.817	NaN	1639.3	30	0	300.69	0.106				-1	 	0	55	516.281064474809	515.273788008209	1	516.2805786132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	6073	4558	10630
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10634	32.819	NaN	1498.1	30	0	543.69	0.106			+	26789	LVSAPIAVR	9	44	463.2951773672101	924.5758018012202	2	463.79632568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LVSAPIAVR_	REV__ENSG00000132688|ENST00000368223|NES;REV__NES|p.A1050Pfs*14|1|0.36|ENSG00000132688|chr1:156671040-156671040|C/-|frameshift_variant;REV__NES|p.P1439Qfs*11|1|0.19|ENSG00000132688|chr1:156669874-156669874|C/-|frameshift_variant;REV__NES|p.V1249Cfs*11|1|0.37|ENSG00000132688|chr1:156670443-156670443|C/-|frameshift_variant	29.14955571784316	0.5308295550522326	1				NaN	NaN	0	NaN	6074	4558	10630
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10635	32.821	NaN	1300.2	30	0	140.87	0.033	+			13339	GKRFLLSA	8	48	446.2743286965657	NaN	0	446.2740173339844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GKRFLLSA_	ENST00000370651.5_1_6:64290190-64290403:+|nuORF	31.954861631926434	1.7418937515398478	1				NaN	NaN	0	NaN	6075	4558	10630
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10642	32.838	NaN	14965	30	0	5244.7	0.214	+			14987	GTMTGMLYK	9	66	501.24307681546344	1000.4716006977269	2	501.2430725097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTMTGMLYK_	ENSG00000178440|ENST00000651763|TIMM23B-AGAP6;ENSG00000204152|ENST00000651259|TIMM23B;ENSG00000265354|ENST00000580018|TIMM23;nc|ENSG00000204152|Q5SRD1-2|TIMM23B	118.74307786436346	0.02196067127630568	1				NaN	NaN	0	NaN	6079	4561	10641
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10643	32.841	NaN	1963.2	30	0	256.52	0.106			+	17936	IGLVRIYSS	9	26	336.5341237768996	1006.5805419308988	3	336.5342102050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IGLVRIYSS_	REV__ENSG00000100297|ENST00000216122|MCM5;REV__ENST00000493076.5_1_22:35806581-35817581:+|nuORF	8.231297230196988	0.6112419832031293	1				NaN	NaN	0	NaN	6080	4561	10641
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10644	32.843	NaN	1575.6	30	0	245.51	0.106			+	10387	EVDKQIFPE	9	43	552.7805704955006	NaN	0	552.7808227539062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EVDKQIFPE_	REV__APC|p.C1578Mfs*13|1|0.68|ENSG00000134982|chr5:112840323-112840324|-/A|frameshift_variant;REV__APC|p.E1544Nfs*21|1|0.05|ENSG00000134982|chr5:112840220-112840220|T/-|frameshift_variant;REV__APC|p.E1552Qfs*12|1|0.31|ENSG00000134982|chr5:112840247-112840250|AGAG/-|frameshift_variant;REV__APC|p.E1576Kfs*74|1|0.61|ENSG00000134982|chr5:112840319-112840319|A/-|frameshift_variant;REV__APC|p.I1557*|1|0.43|ENSG00000134982|chr5:112840262-112840263|TA/-|frameshift_variant;REV__APC|p.I1574Yfs*2|1|0.36|ENSG00000134982|chr5:112840312-112840312|A/-|frameshift_variant;REV__APC|p.I1580Lfs*69|1|0.59|ENSG00000134982|chr5:112840330-112840333|TTAT/-|frameshift_variant;REV__APC|p.I1580Nfs*11|1|0.36|ENSG00000134982|chr5:112840331-112840332|-/A|frameshift_variant;REV__APC|p.N1531Rfs*31|1|0.18|ENSG00000134982|chr5:112840186-112840195|ATGACAATGG/-|frameshift_variant;REV__APC|p.N1535Mfs*30|1|0.28|ENSG00000134982|chr5:112840194-112840194|G/-|frameshift_variant;REV__APC|p.S1581Lfs*69|1|0.34|ENSG00000134982|chr5:112840333-112840333|T/-|frameshift_variant;REV__APC|p.T1556Lfs*9|1|0.61|ENSG00000134982|chr5:112840255-112840255|A/-|frameshift_variant;REV__APC|p.T1556Nfs*3|11|0.46|ENSG00000134982|chr5:112840254-112840255|-/A|frameshift_variant;REV__ENSG00000134982|ENST00000257430|APC;REV__nc|ENSG00000134982|P25054-2|APC;REV__nc|ENSG00000134982|P25054-3|APC	37.15910966729921	0.2899585034171616	1				NaN	NaN	0	NaN	6081	4561	10641
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10645	32.845	NaN	1058.4	30	0	151.85	0.106			+	30693	QCVSPYVF	8	36	471.7219503609321	941.4293477886642	2	471.7217102050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QCVSPYVF_	REV__ENSG00000188868|ENST00000293725|ZNF563;REV__ENSG00000188868|ENST00000293725|ZNF563	25.450171626174864	0.7628259754767981	1				NaN	NaN	0	NaN	6082	4561	10641
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10646	32.847	NaN	1303.3	30	0	146.25	0.106	+			27927	MVASQAYNLT	10	51	549.2678829111795	1096.521212889159	2	549.2685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MVASQAYNLT_	ENSG00000008710|ENST00000262304|PKD1;ENST00000339303.5_16:18434460-18437593:-|nuORF;ENST00000343738.10_1_16:15225298-15225511:-|nuORF;ENST00000415938.7_1_16:2152605-2162466:-|nuORF;ENST00000483731.5_1_16:2153201-2162466:-|nuORF;ENST00000541836.5_1_16:15021147-15029115:+|nuORF;ENST00000561991.5_1_16:2153598-2156273:-|nuORF;nc|ENSG00000008710|P98161-2|PKD1;nc|ENSG00000008710|P98161-3|PKD1	35.15202426646627	0.5927656479315102	1				NaN	NaN	0	NaN	6083	4561	10641
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10647	32.849	NaN	1348.1	30	0	251.17	0.106	+			20835	KIIDTAGLS	9	51	459.26902979663225	916.5235066600645	2	459.2688293457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KIIDTAGLS_	ENSG00000119401|ENST00000450136|TRIM32;TRIM32|p.K604Rfs*21|1|0.05|ENSG00000119401|chr9:116699550-116699551|-/GAGAA|frameshift_variant	29.14955571784316	0.5308295550522326	1				NaN	NaN	0	NaN	6084	4561	10641
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10648	32.85	NaN	1889.9	30	0	251.66	0.036			+	44042	TPPPPVPPPR	10	58	527.8056758075861	1053.5967986819721	2	527.8048095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TPPPPVPPPR_	REV__ENSG00000102890|ENST00000393997|ELMO3;REV__nc|ENSG00000102890|Q96BJ8-2|ELMO3;REV__nc|ENSG00000102890|Q96BJ8-3|ELMO3	40.77816245573522	0.5419747034533848	1				NaN	NaN	0	NaN	6085	4561	10641
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10652	32.864	NaN	4942.3	30	0	1202.7	0.214	+			6284	AVSTFAMVK	9	62	477.2592672135248	952.5039814938497	2	477.2592468261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVSTFAMVK_	ENSG00000172893|ENST00000355527|DHCR7;ENST00000534701.1_1_11:71149825-71152361:-|nuORF	66.42927471994793	0.16001998865088202	1				NaN	NaN	0	NaN	6086	4564	10651
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10653	32.868	NaN	1344.8	30	0	200.19	0.038			+	-1	QWGGRRGCRA	10	49	602.2998999152127	1202.5852468972253	2	602.3004760742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_QWGGRRGC(Carbamidomethyl (C))RA_	REV__ENST00000466772.5_1_22:21063687-21064617:-|nuORF;REV__ENST00000486209.5_1_22:21827645-21829738:-|nuORF;REV__ENST00000492581.5_1_22:21062337-21064665:-|nuORF	21.9598887501803	0.7004979571547932	1				NaN	NaN	0	NaN	6087	4564	10651
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10662	32.89	NaN	6523.5	30	0	668.15	0.214	+			41363	SVMELARLK	9	66	523.8049089798125	1045.5952650264248	2	523.8057250976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVMELARLK_	ENSG00000115649|ENST00000360507|CNPPD1	72.2432373244024	0.13108886737667413	1				NaN	NaN	0	NaN	6093	4567	10661
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10663	32.893	NaN	2545.3	30	0	799.04	0.106			+	28264	NDPAPSFFM	9	39	513.2230041525626	1024.431455371925	2	513.2227783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NDPAPSFFM_	REV__ENSG00000132394|ENST00000254730|EEFSEC;REV__nc|ENSG00000132394|P57772-2|EEFSEC	17.364965105453717	0.6112419832031293	1				NaN	NaN	0	NaN	6094	4567	10661
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10664	32.895	NaN	1723.2	30	0	365.5	0.106	+			39501	STFNQVVLK	9	58	518.29533246032	1034.5761119874398	2	518.2958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STFNQVVLK_	ENSG00000063177|ENST00000549920|RPL18;ENST00000478088.1_1_16:76269257-76269449:-|nuORF;ENST00000547892.1_1_19:49120227-49120731:-|nuORF;ENST00000552347.5_1_19:49120227-49122400:-|nuORF;ENST00000552705.5_1_19:49119841-49122400:-|nuORF;ENST00000552851.1_1_19:49119841-49122400:-|nuORF;nc|ENSG00000063177|Q07020-2|RPL18	77.31757898189308	0.1091473830098891	1				NaN	NaN	0	NaN	6095	4567	10661
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10665	32.897	NaN	1691	30	0	142.03	0.106			+	49317	VVRVLTEPY	9	46	538.3106043993131	1074.606655865426	2	538.3110961914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVRVLTEPY_	REV__ENSG00000130653|ENST00000406427|PNPLA7;REV__nc|ENSG00000130653|Q6ZV29-2|PNPLA7;REV__nc|ENSG00000130653|Q6ZV29-3|PNPLA7;REV__nc|ENSG00000130653|Q6ZV29-4|PNPLA7;REV__nc|ENSG00000130653|Q6ZV29|PNPLA7;REV__PNPLA7|p.G1083Afs*19|1|0.2|ENSG00000130653|chr9:137463435-137463435|C/-|frameshift_variant	24.20275056022122	0.577060078256802	1				NaN	NaN	0	NaN	6096	4567	10661
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10666	32.899	NaN	1601.8	30	0	270.65	0.106	+			24873	LKFNYSTAHS	10	45	584.2951610366247	1166.5757691400493	2	584.295654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LKFNYSTAHS_	ENSG00000196083|ENST00000447382|IL1RAP;nc|ENSG00000196083|Q9NPH3-2|IL1RAP;nc|ENSG00000196083|Q9NPH3-3|IL1RAP;nc|ENSG00000196083|Q9NPH3-5|IL1RAP	37.81151784470057	0.569310847604193	1				NaN	NaN	0	NaN	6097	4567	10661
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10667	32.901	NaN	1255.5	30	0	370.45	0.106	+			37884	SNYKGKTVY	9	48	530.2759530424233	NaN	0	530.2772827148438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SNYKGKTVY_	tr|U7SJ20|U7SJ20_FUSNUPepSYdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02065PE=4SV=1	34.172542307311794	0.30503706118289736	1				NaN	NaN	0	NaN	6098	4567	10661
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10668	32.903	NaN	1612.3	30	0	149.94	0.037	+			24002	LEASQEFVLN	10	46	575.2927964577311	1148.5710399822622	2	575.7960815429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LEASQEFVLN_	ENST00000565559.5_2_15:42697105-42701567:+|nuORF	37.81151784470057	0.569310847604193	1				NaN	NaN	0	NaN	6099	4567	10661
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10673	32.917	NaN	15072	30	0	3653.1	0.214	+			51183	YPIEHGIIT	9	68	521.781913591841	1041.5492742504819	2	521.7822875976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YPIEHGIIT_	ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENST00000428275.1_1_X:53172740-53172956:-|nuORF;ENST00000473016.1_1_2:74120109-74129648:+|nuORF;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000488967.5_1_10:90706975-90712518:-|nuORF	60.11826168202944	0.21262886028301267	1				NaN	NaN	0	NaN	6101	4570	10672
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10674	32.921	NaN	2106.6	30	0	238.71	0.106	+			23666	LASIWCYQ	8	61	492.2376757016607	982.4607984701214	2	492.23699951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LASIWCYQ_	ENST00000589917.1_1_18:44483500-44500057:-|nuORF	47.91560031466742	0.6071945918984287	1				NaN	NaN	0	NaN	6102	4570	10672
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10675	32.923	NaN	2604.9	30	0	264.66	0.106	+			51413	YTSGSGQKLF	10	60	544.2745121806614	1086.5344714281227	2	544.2758178710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YTSGSGQKLF_	ADGRE3|p.F254Lfs*12|1|0.18|ENSG00000131355|chr19:14647301-14647301|A/-|frameshift_variant;ENSG00000131355|ENST00000253673|ADGRE3;ENST00000599900.5_1_19:14769312-14779653:-|nuORF;nc|ENSG00000131355|Q9BY15-2|ADGRE3;nc|ENSG00000131355|Q9BY15-3|ADGRE3	44.377184641726394	0.5088115166961078	1				NaN	NaN	0	NaN	6103	4570	10672
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10676	32.924	NaN	2552.9	30	0	233.12	0.106			+	-1	CKKLHRVTEEL	11	57	706.8888735196198	NaN	0	706.8882446289062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_C(Carbamidomethyl (C))KKLHRVTEEL_	REV__ENSG00000144395|ENST00000389175|CCDC150	14.137123925751023	0.456735970842152	1				NaN	NaN	0	NaN	6104	4570	10672
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10677	32.926	NaN	2236.1	30	0	165.88	0.035			+	-1	GKIMRALLE	9	63	523.8049089798125	1045.5952650264248	2	524.8073120117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_GKIM(Oxidation (M))RALLE_	REV__ENSG00000077232|ENST00000264065|DNAJC10;REV__ENST00000418559.5_1_2:183617332-183641856:+|nuORF;REV__ENST00000491074.5_1_2:183616895-183641856:+|nuORF;REV__nc|ENSG00000077232|Q8IXB1-2|DNAJC10	39.252832667884924	0.4290233611298554	1				NaN	NaN	0	NaN	6105	4570	10672
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10683	32.942	NaN	4369.7	30	0	840.94	0.214			+	24312	LFHLTAGSP	9	54	471.7556965845326	941.4968402358652	2	471.7554016113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LFHLTAGSP_	REV__ENST00000248121.6_1_16:2043508-2043775:+|nuORF	31.954861631926434	0.5046124803899898	1				NaN	NaN	0	NaN	6108	4573	10682
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10684	32.946	NaN	1511.3	30	0	167.35	0.106				-1	 	0	58	571.2953049300969	570.2880284634969	1	571.2955322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	6109	4573	10682
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10685	32.948	NaN	2410.9	30	0	262.61	0.106	+			36522	SFEDAKEAL	9	50	505.2454455215072	1008.4763381098144	2	505.2455749511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SFEDAKEAL_	ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232319904-232323320:-|nuORF	78.26377905018397	0.10505600812668463	1				NaN	NaN	0	NaN	6110	4573	10682
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10686	32.95	NaN	1340.2	30	0	180.64	0.106	+			23645	LARILTAY	8	39	460.7817724708119	919.5489920084239	2	460.78131103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LARILTAY_	ENSG00000178795|ENST00000315938|GDPD4;GDPD4|p.N396Tfs*5|2|0.24|ENSG00000178795|chr11:77243748-77243748|T/-|frameshift_variant;nc|ENSG00000178795|Q6W3E5|GDPD4	40.5726180659479	0.6527593143185008	1				NaN	NaN	0	NaN	6111	4573	10682
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10687	32.952	NaN	1779	30	0	199.94	0.106			+	27023	LYSHGSSVYF	10	54	580.2741848441849	1158.5338167551697	2	580.2747802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LYSHGSSVYF_	REV__ENST00000460092.2_1_X:110970875-110979982:+|nuORF	32.81241826257853	0.6118718159329168	1				NaN	NaN	0	NaN	6112	4573	10682
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10688	32.953	NaN	1445.7	30	0	189.24	0.106			+	24565	LGMVVLLMYF	10	49	593.3216818371351	1184.62881074107	2	593.3222045898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LGMVVLLMYF_	REV__GRIN2D|p.A855V|1|0.07|ENSG00000105464|chr19:48442273-48442273|C/T|missense_variant	35.200714571348534	0.5923680232273616	1				NaN	NaN	0	NaN	6113	4573	10682
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10689	32.955	NaN	692.43	30	0	65.918	0.034			+	24364	LFPQAAVQS	9	48	480.7602814719096	NaN	0	480.7610168457031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LFPQAAVQS_	REV__ENST00000336614.8_1_19:58967852-58967984:+|nuORF	24.20275056022122	0.35506675290109213	1				NaN	NaN	0	NaN	6114	4573	10682
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10694	32.97	NaN	3405.4	30	0	541.12	0.214			+	-1	FFLVMTAKHV	10	44	403.5555651674712	1207.6448661026136	3	403.5556640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_FFLVM(Oxidation (M))TAKHV_	REV__ENST00000609469.5_1_3:122135093-122161595:+|nuORF	22.579656572578934	0.6954366826851017	1				NaN	NaN	0	NaN	6116	4576	10693
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10695	32.973	NaN	2120.1	30	0	219.66	0.106	+			11583	FPPAVNRVSP	10	70	542.3013153244015	NaN	0	542.3003540039062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FPPAVNRVSP_	ENSG00000214929|ENST00000344803|SPATA31D1	78.26377905018397	0.10800580676963668	1				NaN	NaN	0	NaN	6117	4576	10693
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10696	32.975	NaN	2057	30	0	508.43	0.035	+			17785	IETLTKTAL	9	59	495.29707687182395	NaN	0	495.2976379394531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IETLTKTAL_	ENSG00000197879|ENST00000648651|MYO1C;nc|ENSG00000197879|O00159-2|MYO1C;nc|ENSG00000197879|O00159-3|MYO1C	51.19269402634007	0.19847346126499396	1				NaN	NaN	0	NaN	6118	4576	10693
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10703	32.993	NaN	2227.1	30	0	264.02	0.145			+	20167	KEKRYNRNT	9	64	604.8300040403511	NaN	0	604.830078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEKRYNRNT_	REV__ENST00000422252.1_1_22:42478055-42479288:+|nuORF	44.377184641726394	0.24544280798894275	1				NaN	NaN	0	NaN	6122	4579	10702
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10709	33.011	NaN	1708.1	30	0	196.13	0.214			+	47896	VSLKGIGSI	9	44	437.273575316441	872.532597699682	2	437.2731018066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSLKGIGSI_	REV__ENST00000497196.5_1_22:38889517-38891019:-|nuORF	63.53385203322761	0.18415635464017938	1				NaN	NaN	0	NaN	6125	4582	10708
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10710	33.015	NaN	3452.8	30	0	372.36	0.106			+	33978	RSFIEQLKQ	9	73	574.8244184824027	1147.6342840316054	2	574.8247680664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RSFIEQLKQ_	REV__ENSG00000120733|ENST00000314358|KDM3B;REV__ENST00000512928.1_1_5:137708527-137717285:+|nuORF;REV__KDM3B|p.K627Nfs*60|1|0.38|ENSG00000120733|chr5:138391505-138391505|C/-|frameshift_variant;REV__KDM3B|p.P1317Rfs*10|1|0.45|ENSG00000120733|chr5:138420936-138420936|C/-|frameshift_variant	39.252832667884924	0.4290233611298554	1				NaN	NaN	0	NaN	6126	4582	10708
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10711	33.017	NaN	1569.7	30	0	175.78	0.106	+			29101	NTNEVVIRY	9	60	554.2937068642062	NaN	0	554.2919311523438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NTNEVVIRY_	ENSG00000196116|ENST00000355295|TDRD7;nc|ENSG00000196116|Q8NHU6-2|TDRD7;TDRD7|p.N797Sfs*58|1|0.03|ENSG00000196116|chr9:97480915-97480916|-/GTAATGTTAAT|frameshift_variant	42.396135135203025	0.2590952873412954	1				NaN	NaN	0	NaN	6127	4582	10708
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10712	33.019	NaN	1547.4	30	0	139.99	0.04			+	-1	DPESIVIFMRR	11	47	689.8605346679688	NaN	0	689.8605346679688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_DPESIVIFM(Oxidation (M))RR_	REV__ENSG00000059377|ENST00000448866|TBXAS1;REV__ENST00000462275.5_1_7:139529186-139716213:+|nuORF;REV__nc|ENSG00000059377|P24557-2|TBXAS1;REV__nc|ENSG00000059377|P24557-3|TBXAS1;REV__nc|ENSG00000059377|P24557-4|TBXAS1	19.996771675451527	0.456735970842152	1				NaN	NaN	0	NaN	6128	4582	10708
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10718	33.035	NaN	3640.8	30	0	406.93	0.214	+			34867	RYTIVQQQI	9	63	574.8244184824027	1147.6342840316054	2	575.3267822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RYTIVQQQI_	ENSG00000130640|ENST00000252936|TUBGCP2;nc|ENSG00000130640|Q9BSJ2-3|TUBGCP2;nc|ENSG00000130640|Q9BSJ2-4|TUBGCP2	44.377184641726394	0.36891676396732553	1				NaN	NaN	0	NaN	6131	4585	10717
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10719	33.039	NaN	1310.9	30	0	136.78	0.035	+			27662	MPSQGSMVF	9	52	492.21917943542536	982.4238059376507	2	492.2190856933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MPSQGSMVF_	LGI1|p.R474Q|1|0.13|ENSG00000108231|chr10:93797550-93797550|G/A|missense_variant	42.396135135203025	0.392153681582562	1				NaN	NaN	0	NaN	6132	4585	10717
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10723	33.053	NaN	1439.2	30	0	254.57	0.214	+			41236	SVLGISTPK	9	48	451.2712400987405	900.5279272642811	2	451.2705993652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVLGISTPK_	ENSG00000151327|ENST00000280987|FAM177A1;nc|ENSG00000151327|Q8N128|FAM177A1	54.722347961057174	0.257609425301511	1				NaN	NaN	0	NaN	6133	4588	10722
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10724	33.056	NaN	1830.2	30	0	338.25	0.106	+			1107	AELKMTGNCL	10	62	568.775936780153	1135.5373206271058	2	568.7764282226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_AELKMTGNC(Carbamidomethyl (C))L_	ENSG00000113460|ENST00000336767|BRIX1;ENST00000510960.5_1_5:34915843-34922894:+|nuORF	45.02220120713402	0.5028680121232791	1				NaN	NaN	0	NaN	6134	4588	10722
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10725	33.058	NaN	1766.9	30	0	207.89	0.037			+	2775	ARPFQDMPVI	10	57	587.3098808446191	NaN	0	587.3102416992188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ARPFQDMPVI_	REV__ENSG00000170190|ENST00000329783|SLC16A5;REV__nc|ENSG00000170190|O15375-2|SLC16A5	45.97224482568171	0.33106653400957564	1				NaN	NaN	0	NaN	6135	4588	10722
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10731	33.074	NaN	1424.6	30	0	387.23	0.214	+			25022	LLGTAALAPGA	11	42	477.78437544870394	953.5541979642079	2	477.7843017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LLGTAALAPGA_	nc|ENSG00000157168|Q02297-9|NRG1	42.396135135203025	0.5251566046092361	1				NaN	NaN	0	NaN	6138	4591	10730
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10732	33.078	NaN	2265.1	30	0	570.14	0.036	+			8500	EATGQFHVY	9	63	526.2458160445187	1050.4770791558374	2	526.2463989257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EATGQFHVY_	CEACAM6|p.I217Mfs*11|3|0.07|ENSG00000086548|chr19:41761474-41761475|-/G|frameshift_variant;chr19:41756959-41758061|166|203.57|0.0|24.28|+|2|CEACAM6,None|1;ENSG00000079385|ENST00000161559|CEACAM1;ENSG00000086548|ENST00000199764|CEACAM6;ENSG00000170956|ENST00000357396|CEACAM3;ENST00000344391.9_1_19:43023158-43032553:-|nuORF;ENST00000377806.7_1_19:43023094-43032607:-|nuORF;ENST00000403136.1_1_19:43025413-43032607:-|nuORF;nc|ENSG00000079385|P13688-10|CEACAM1;nc|ENSG00000079385|P13688-11|CEACAM1;nc|ENSG00000079385|P13688-2|CEACAM1;nc|ENSG00000079385|P13688-3|CEACAM1;nc|ENSG00000079385|P13688-4|CEACAM1;nc|ENSG00000079385|P13688-5|CEACAM1;nc|ENSG00000079385|P13688-6|CEACAM1;nc|ENSG00000079385|P13688-7|CEACAM1;nc|ENSG00000079385|P13688-8|CEACAM1;nc|ENSG00000079385|P13688-9|CEACAM1;nc|ENSG00000170956|P40198-2|CEACAM3;nc|ENSG00000170956|P40198-3|CEACAM3	85.35947970620816	0.07794846947388434	1				NaN	NaN	0	NaN	6139	4591	10730
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10738	33.094	NaN	4230.1	30	0	1174.1	0.214	+			14822	GTLIDNQFK	9	69	518.2767244550114	1034.5388959768227	2	518.77734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTLIDNQFK_	ENSG00000018610|ENST00000644802|STEEP1;ENST00000469448.1_1_X:118673692-118676584:-|nuORF;nc|ENSG00000018610|Q9H5V9-2|STEEP1;nc|ENSG00000018610|Q9H5V9-3|STEEP1	41.42661286455405	0.403525789677298	1				NaN	NaN	0	NaN	6142	4594	10737
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10739	33.098	NaN	4811.4	30	0	809.22	0.106				-1	 	0	64	557.3345284327343	1112.6545039322684	2	557.33544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	6143	4594	10737
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10740	33.1	NaN	2291.5	30	0	242.23	0.036	+			42137	SYNPITHQL	9	63	536.7753557935638	1071.5361586539275	2	536.7750244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SYNPITHQL_	ENSG00000163913|ENST00000348417|IFT122;ENST00000506507.5_1_3:129168750-129233481:+|nuORF;nc|ENSG00000163913|Q9HBG6-11|IFT122;nc|ENSG00000163913|Q9HBG6-3|IFT122;nc|ENSG00000163913|Q9HBG6-5|IFT122;nc|ENSG00000163913|Q9HBG6-6|IFT122	51.19269402634007	0.2889735674168909	1				NaN	NaN	0	NaN	6144	4594	10737
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10744	33.114	NaN	5946.9	30	0	886.44	0.214	+			14823	GTLIDNQFK	9	54	518.2767244550114	1034.5388959768227	2	518.2778930664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTLIDNQFK_	ENSG00000018610|ENST00000644802|STEEP1;ENST00000469448.1_1_X:118673692-118676584:-|nuORF;nc|ENSG00000018610|Q9H5V9-2|STEEP1;nc|ENSG00000018610|Q9H5V9-3|STEEP1	54.722347961057174	0.257609425301511	1				NaN	NaN	0	NaN	6145	4597	10743
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10745	33.117	NaN	1333.6	30	0	240.37	0.106			+	28926	NRGSGPYGRY	10	56	563.7739339972987	1125.5333150613974	2	563.77490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NRGSGPYGRY_	REV__ADAMTS18|p.R651Gfs*51|1|0.31|ENSG00000140873|chr16:77325948-77325948|A/-|frameshift_variant;REV__ENSG00000140873|ENST00000282849|ADAMTS18;REV__nc|ENSG00000140873|Q8TE60-2|ADAMTS18	42.396135135203025	0.5270658956260207	1				NaN	NaN	0	NaN	6146	4597	10743
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10746	33.119	NaN	1668.2	30	0	285.13	0.037			+	16003	HAPIETQQSM	10	51	571.2684737510727	1140.5223945689454	2	571.2694702148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HAPIETQQSM_	REV__ENSG00000205838|ENST00000505624|TTC23L;REV__ENST00000502782.5_1_5:34838982-34863053:+|nuORF;REV__ENST00000508377.5_1_5:34839347-34845796:+|nuORF;REV__nc|ENSG00000205838|Q6PF05-2|TTC23L;REV__nc|ENSG00000205838|Q6PF05-3|TTC23L	47.657333605630114	0.47858658696240314	1				NaN	NaN	0	NaN	6147	4597	10743
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10752	33.136	NaN	3253.5	30	0	589.77	0.214	+			25137	LLSDKATSPL	10	67	522.8002681226099	1043.5859833120196	2	522.8004150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LLSDKATSPL_	ENSG00000130529|ENST00000252826|TRPM4;ENST00000596338.5_1_19:49685858-49692185:+|nuORF;nc|ENSG00000130529|Q8TD43-2|TRPM4;nc|ENSG00000130529|Q8TD43-3|TRPM4;TRPM4|p.F902Sfs*22|1|0.3|ENSG00000130529|chr19:49200356-49200356|T/-|frameshift_variant;TRPM4|p.W1124Gfs*5|1|0.32|ENSG00000130529|chr19:49210750-49210751|GT/-|frameshift_variant	54.722347961057174	0.4138398245444204	1				NaN	NaN	0	NaN	6150	4600	10751
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10753	33.139	NaN	1549.3	30	0	240.11	0.106			+	37944	SPELAKAALL	10	57	506.8055386035592	NaN	0	506.80548095703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SPELAKAALL_	REV__ENSG00000131149|ENST00000253458|GSE1;REV__GSE1|p.P1093Qfs*45|1|0.45|ENSG00000131149|chr16:85668282-85668282|C/-|frameshift_variant;REV__nc|ENSG00000131149|Q14687-2|GSE1;REV__nc|ENSG00000131149|Q14687-3|GSE1	35.17822180527639	0.3846679649904324	1				NaN	NaN	0	NaN	6151	4600	10751
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10754	33.141	NaN	2290.4	30	0	225.89	0.035			+	2215	ALQSIFFY	8	56	494.7591452818087	987.5037376304174	2	495.26220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ALQSIFFY_	REV__ENSG00000183310|ENST00000328782|OR2T34;REV__ENSG00000196539|ENST00000359594|OR2T3;REV__OR2T3|p.V289Cfs*2|1|0.13|ENSG00000196539|chr1:248474215-248474215|G/-|frameshift_variant	33.51558372728122	0.7005509609380386	1				NaN	NaN	0	NaN	6152	4600	10751
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10765	33.176	NaN	2029.1	30	0	737.31	0.214	+			14988	GTMTGMLYK	9	54	501.24307681546344	1000.4716006977269	2	501.2429504394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTMTGMLYK_	ENSG00000178440|ENST00000651763|TIMM23B-AGAP6;ENSG00000204152|ENST00000651259|TIMM23B;ENSG00000265354|ENST00000580018|TIMM23;nc|ENSG00000204152|Q5SRD1-2|TIMM23B	32.81241826257853	0.4965981579233955	1				NaN	NaN	0	NaN	6157	4606	10764
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10766	33.18	NaN	4243.1	30	0	685.98	0.106			+	29212	NVSDPLQIQLQ	11	60	627.837852449332	1253.661151965464	2	627.83740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NVSDPLQIQLQ_	REV__ENST00000469445.1_1_2:27263203-27263702:+|nuORF	29.170058357718403	0.683821074385409	1				NaN	NaN	0	NaN	6158	4606	10764
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10767	33.181	NaN	2830.7	30	0	324.19	0.106	+			23418	LACGVAKVL	9	50	465.775545525964	929.536538118728	2	465.7754821777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LAC(Carbamidomethyl (C))GVAKVL_	ENSG00000265972|ENST00000582401|TXNIP	106.41520541750704	0.03265588207292361	1				NaN	NaN	0	NaN	6159	4606	10764
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10768	33.183	NaN	2641.2	30	0	539.99	0.106	+			9752	ENFRLKSY	8	64	528.7773384273735	1055.5401239215469	2	528.7782592773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ENFRLKSY_	ENSG00000114030|ENST00000344337|KPNA1	44.377184641726394	0.6291511924298419	1				NaN	NaN	0	NaN	6160	4606	10764
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10769	33.185	NaN	2389.8	30	0	725.43	0.106	+			30659	QAVILDQKY	9	58	539.3005131432793	1076.5864733533585	2	539.3009643554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QAVILDQKY_	ENSG00000127831|ENST00000248444|VIL1	77.31757898189308	0.1091473830098891	1				NaN	NaN	0	NaN	6161	4606	10764
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10770	33.187	NaN	2296.5	30	0	437.96	0.106	+			18709	ITEPHSQAL	9	45	498.2611641140369	994.5077752948738	2	498.2611389160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ITEPHSQAL_	ENSG00000187741|ENST00000389301|FANCA;FANCA|p.E800Gfs*16|1|0.13|ENSG00000187741|chr16:89769934-89769944|CATCCACCTCT/-|frameshift_variant;FANCA|p.G972Afs*17|1|0.37|ENSG00000187741|chr16:89758643-89758643|C/-|frameshift_variant;FANCA|p.V925Rfs*18|1|0.2|ENSG00000187741|chr16:89764895-89764896|-/G|frameshift_variant;nc|ENSG00000187741|O15360-3|FANCA	37.81151784470057	0.4459294069877048	1				NaN	NaN	0	NaN	6162	4606	10764
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10771	33.189	NaN	2022.3	30	0	385.09	0.035	+			46741	VGRLILYSS	9	37	336.53413235945203	1006.5805676785561	3	336.5342102050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VGRLILYSS_	ENSG00000144320|ENST00000272748|LNPK;nc|ENSG00000144320|Q9C0E8-2|LNPK;nc|ENSG00000144320|Q9C0E8-4|LNPK	18.324413293986947	0.6112419832031293	1				NaN	NaN	0	NaN	6163	4606	10764
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10777	33.203	NaN	4763.4	30	0	693.06	0.214	+			15114	GTQSFVFQR	9	64	535.27497527769	1068.53539762218	2	535.2754516601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTQSFVFQR_	ENSG00000147955|ENST00000277010|SIGMAR1;ENST00000378892.5_1_9:34637493-34637721:-|nuORF;ENST00000497006.1_1_9:34637208-34637655:-|nuORF;nc|ENSG00000147955|Q99720-3|SIGMAR1;nc|ENSG00000147955|Q99720-4|SIGMAR1	134.7655990226056	0.012935733000282069	1				NaN	NaN	0	NaN	6166	4609	10776
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10778	33.207	NaN	1650.5	30	0	289.32	0.106	+			12486	GEDWNAVMY	9	47	542.7236312191253	1083.4327095050505	2	542.724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEDWNAVMY_	CACNA1B|p.P2044Lfs*125|1|0.41|ENSG00000148408|chr9:138120261-138120261|C/-|frameshift_variant;CACNA1D|p.A841Dfs*10|1|0.73|ENSG00000157388|chr3:53732862-53732865|GCCG/-|frameshift_variant;CACNA1D|p.D713V|1|0.08|ENSG00000157388|chr3:53726916-53726916|A/T|missense_variant;CACNA1D|p.F1318Sfs*6|1|0.39|ENSG00000157388|chr3:53770457-53770457|T/-|frameshift_variant;CACNA1D|p.N2051Tfs*16|1|0.26|ENSG00000157388|chr3:53810254-53810254|A/-|frameshift_variant;ENSG00000148408|ENST00000371372|CACNA1B;ENSG00000157388|ENST00000350061|CACNA1D;nc|ENSG00000148408|Q00975-2|CACNA1B;nc|ENSG00000157388|Q01668-2|CACNA1D;nc|ENSG00000157388|Q01668-3|CACNA1D;nc|ENSG00000157388|Q01668-4|CACNA1D	31.954861631926434	0.5046124803899898	1				NaN	NaN	0	NaN	6167	4609	10776
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10779	33.209	NaN	1999.9	30	0	363.47	0.106			+	9800	EPATGRLASI	10	58	507.78237320463256	NaN	0	507.7821350097656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EPATGRLASI_	REV__ENSG00000163629|ENST00000411767|PTPN13;REV__nc|ENSG00000163629|Q12923-2|PTPN13;REV__nc|ENSG00000163629|Q12923-3|PTPN13;REV__nc|ENSG00000163629|Q12923-4|PTPN13;REV__PTPN13|p.T2330Qfs*13|1|0.12|ENSG00000163629|chr4:86807799-86807799|A/-|frameshift_variant	46.45678178249821	0.32800322091223805	1				NaN	NaN	0	NaN	6168	4609	10776
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10780	33.211	NaN	2189.4	30	0	616.43	0.106	+			23838	LCWAGLVVL	9	55	487.2812190594114	NaN	0	487.28106689453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LCWAGLVVL_	ENST00000598969.5_1_19:19010490-19016602:-|nuORF	39.021493756699265	0.2805557132942146	1				NaN	NaN	0	NaN	6169	4609	10776
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10781	33.213	NaN	2310.5	30	0	179.9	0.106	+			19999	KEIETTGTYQL	11	74	641.8303197163506	NaN	0	641.8300170898438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEIETTGTYQL_	ENSG00000007171|ENST00000313735|NOS2;nc|ENSG00000007171|P35228-2|NOS2;NOS2|p.A650Pfs*53|1|0.21|ENSG00000007171|chr17:27769063-27769063|C/-|frameshift_variant;NOS2|p.Y709*|1|0.33|ENSG00000007171|chr17:27767745-27767745|G/-|frameshift_variant	55.721020083383095	0.2739492330573669	1				NaN	NaN	0	NaN	6170	4609	10776
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10782	33.214	NaN	1137.7	30	0	127.73	0.038			+	20947	KKDAVIFIVDG	11	50	602.8502220291448	1203.6858911250895	2	602.8495483398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KKDAVIFIVDG_	REV__tr|U7SY24|U7SY24_FUSNUAspartate--tRNAligaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=aspSPE=3SV=1	22.561587123415745	0.7531385481947795	1				NaN	NaN	0	NaN	6171	4609	10776
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10788	33.229	NaN	2411	30	0	244.85	0.215			+	15876	GYNKEETLGK	10	68	569.7899432421772	1137.5653335511543	2	569.7911987304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GYNKEETLGK_	REV__ENSG00000057468|ENST00000263187|MSH4	45.02220120713402	0.5028680121232791	1				NaN	NaN	0	NaN	6174	4612	10787
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10789	33.233	NaN	2640.4	30	0	431.99	0.106	+			47555	VRCMHLLL	8	58	500.774698560455	999.5348441877101	2	500.7739562988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_VRCM(Oxidation (M))HLLL_	ENSG00000130508|ENST00000252804|PXDN;nc|ENSG00000130508|Q92626-2|PXDN;PXDN|p.C857Afs*5|2|0.33|ENSG00000130508|chr2:1649212-1649212|G/-|frameshift_variant;PXDN|p.E1339Lfs*66|1|0.26|ENSG00000130508|chr2:1639361-1639362|-/AG|frameshift_variant;PXDN|p.G470Rfs*19|1|0.14|ENSG00000130508|chr2:1664962-1664963|-/T|frameshift_variant;PXDN|p.N1190Mfs*12|1|0.22|ENSG00000130508|chr2:1648211-1648211|T/-|frameshift_variant;PXDN|p.N1194Tfs*8|1|0.25|ENSG00000130508|chr2:1648199-1648199|T/-|frameshift_variant;PXDN|p.N865Mfs*25|3|0.42|ENSG00000130508|chr2:1649188-1649188|G/-|frameshift_variant;PXDN|p.R1242Pfs*22|1|0.07|ENSG00000130508|chr2:1644636-1644637|-/AG|frameshift_variant	44.53106598305862	0.628196326904373	1				NaN	NaN	0	NaN	6175	4612	10787
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10790	33.235	NaN	2509.9	30	0	378.4	0.038	+			4923	ATQMVRMILK	10	63	595.8402913873666	NaN	0	595.8401489257812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATQMVRMILK_	ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5	73.84112541714126	0.12976974590634552	1				NaN	NaN	0	NaN	6176	4612	10787
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10800	33.257	NaN	2691.8	30	0	386.64	0.214			+	15339	GTVKVTFPSGP	11	42	545.3002821084566	1088.586011283713	2	545.3004150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTVKVTFPSGP_	REV__ENSG00000128591|ENST00000325888|FLNC;REV__FLNC|p.H2471Tfs*58|1|0.18|ENSG00000128591|chr7:128856767-128856767|C/-|frameshift_variant;REV__nc|ENSG00000128591|Q14315-2|FLNC	32.75053402867276	0.6462648045997152	1				NaN	NaN	0	NaN	6183	4615	10799
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10801	33.26	NaN	2321.1	30	0	269.82	0.106	+			10725	FADQEVRSL	9	54	532.7723838479992	1063.5302147627983	2	532.7720336914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FADQEVRSL_	ENSG00000011405|ENST00000691414|PIK3C2A	94.4091291819064	0.0524345700464502	1				NaN	NaN	0	NaN	6184	4615	10799
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10802	33.262	NaN	2030.2	30	0	277.42	0.038			+	-1	ECRTHKMTL	9	61	596.2861165975539	1190.5576802619078	2	596.2859497070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_EC(Carbamidomethyl (C))RTHKM(Oxidation (M))TL_	REV__CYP1A2|p.A502T|1|0.09|ENSG00000140505|chr15:74755041-74755041|G/A|missense_variant	56.72105179125745	0.24094814563026265	1				NaN	NaN	0	NaN	6185	4615	10799
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10808	33.277	NaN	2147	30	0	413.35	0.214	+			24858	LKEEHVAY	8	56	494.7591452818087	987.5037376304174	2	494.75830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LKEEHVAY_	sp|F5HEN8|HELI_HCMVMDNAreplicationhelicaseOS=Humancytomegalovirus(strainMerlin)OX=295027GN=HELIPE=3SV=1;sp|P16736|HELI_HCMVADNAreplicationhelicaseOS=Humancytomegalovirus(strainAD169)OX=10360GN=HELIPE=3SV=1	60.29395666154354	0.49887135096048313	1				NaN	NaN	0	NaN	6188	4618	10807
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10809	33.281	NaN	1317	30	0	107.53	0.106			+	10803	FAKMILAI	8	52	461.77447509765625	NaN	0	461.77447509765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_FAKM(Oxidation (M))ILAI_	REV__tr|U7T5B6|U7T5B6_FUSNUTyrrecombinasedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00006PE=4SV=1	44.53106598305862	1.7418937515398478	1				NaN	NaN	0	NaN	6189	4618	10807
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10810	33.283	NaN	1215.1	30	0	122.34	0.106	+			38308	SRAPVRMR	8	50	486.77905676086243	NaN	0	486.7793273925781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SRAPVRMR_	ENST00000305386.3_1_14:50087520-50087640:+|nuORF	56.72105179125745	1.7418937515398478	1				NaN	NaN	0	NaN	6190	4618	10807
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10811	33.284	NaN	1130.3	30	0	192.68	0.035			+	2171	ALMALHVPM	9	47	491.7642446320713	NaN	0	491.7649841308594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ALMALHVPM_	REV__ENSG00000100263|ENST00000216085|RHBDD3;REV__ENST00000496342.1_1_22:29656732-29660364:-|nuORF	29.841539824830324	0.32690339240668626	1				NaN	NaN	0	NaN	6191	4618	10807
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10816	33.299	NaN	1548.1	30	0	230.71	0.214	+			29802	PKCDGQVL	8	40	430.2205413419252	858.4265297506504	2	430.2200927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PKCDGQVL_	ENSG00000006607|ENST00000264042|FARP2;ENST00000473082.5_1_2:242312627-242344774:+|nuORF;nc|ENSG00000006607|O94887-2|FARP2;nc|ENSG00000006607|O94887-3|FARP2	40.77816245573522	0.6514838689002179	1				NaN	NaN	0	NaN	6193	4621	10815
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10817	33.302	NaN	2659.9	30	0	460.11	0.036				-1	SVAEERAGCH	10	64	558.2481946196543	1114.4818363061086	2	558.2499389648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SVAEERAGC(Carbamidomethyl (C))H_	ENST00000477936.2_1_12:8613363-8613591:+|nuORF	33.921630207806714	0.6028135429846169	1				NaN	NaN	0	NaN	6194	4621	10815
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10822	33.317	NaN	1703.1	30	0	166.39	0.214	+			20004	KEIGDIAGV	9	47	451.2530045895996	900.4914562459992	2	451.2529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEIGDIAGV_	ENSG00000137947|ENST00000370500|GTF2B	56.43379154798735	0.2433427591689151	1				NaN	NaN	0	NaN	6196	4624	10821
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10823	33.321	NaN	1452.3	30	0	177.26	0.106	+			7402	DEHAGVISV	9	42	463.7324377424592	925.4503225517184	2	463.7321472167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DEHAGVISV_	ENSG00000134248|ENST00000602318|LAMTOR5;ENST00000531779.1_1_1:110946539-110950281:-|nuORF	42.396135135203025	0.392153681582562	1				NaN	NaN	0	NaN	6197	4624	10821
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10824	33.323	NaN	1534.1	30	0	145.43	0.106				-1	KTRQDMLPEIK	11	45	708.8781655852697	NaN	0	708.8779296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))KTRQDM(Oxidation (M))LPEIK_	CDH20|p.E706K|1|0.29|ENSG00000101542|chr18:61554405-61554405|G/A|missense_variant	33.921630207806714	0.41424167740351664	1				NaN	NaN	0	NaN	6198	4624	10821
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10825	33.324	NaN	1516.7	30	0	121.69	0.106			+	24539	LGLLKPPQP	9	49	481.8050202147044	961.5954874962089	2	481.8046569824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LGLLKPPQP_	REV__AluSz6_dup43940|chr19:17814301-17814610:-|3.685936671004459|0.3287952390102888|3.49|483.0|18|3|anti-sense	55.50420428727701	0.2510918378945873	1				NaN	NaN	0	NaN	6199	4624	10821
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10826	33.326	NaN	1206.3	30	0	135.47	0.034	+			32805	RAVAPTMSL	9	43	473.2626190595578	944.5106851859156	2	473.2620544433594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RAVAPTMSL_	ENSG00000144560|ENST00000430365|VGLL4;nc|ENSG00000144560|Q14135-2|VGLL4;nc|ENSG00000144560|Q14135-4|VGLL4;nc|ENSG00000144560|Q14135-5|VGLL4;nc|ENSG00000144560|Q14135-6|VGLL4;nc|ENSG00000144560|Q14135|VGLL4	37.81151784470057	0.4459294069877048	1				NaN	NaN	0	NaN	6200	4624	10821
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10832	33.343	NaN	6455.7	30	0	660.81	0.214			+	37662	SLQVQLESI	9	64	508.7847709171803	1015.5549889011606	2	508.78472900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLQVQLESI_	REV__ENSG00000048707|ENST00000620676|VPS13D;REV__nc|ENSG00000048707|Q5THJ4-2|VPS13D;REV__VPS13D|p.K3964Nfs*34|1|0.09|ENSG00000048707|chr1:12403831-12403831|A/-|frameshift_variant	118.74307786436346	0.02196067127630568	1				NaN	NaN	0	NaN	6203	4627	10831
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10833	33.347	NaN	3421.8	30	0	472.89	0.106				-1	LGKCHPSSA	9	54	478.7346817279372	955.4548105226744	2	478.7347106933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LGKC(Carbamidomethyl (C))HPSSA_	ENST00000463899.5_1_1:182781291-182795122:+|nuORF	35.61828744233558	0.47037581924408073	1				NaN	NaN	0	NaN	6204	4627	10831
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10834	33.349	NaN	1531.9	30	0	244.2	0.106	+			41981	SVYDSVLQK	9	53	519.7761406218434	1037.5377283104867	2	519.7780151367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVYDSVLQK_	ENSG00000131018|ENST00000367255|SYNE1;ENST00000490135.6_1_6:152637953-152655276:-|nuORF;nc|ENSG00000131018|Q8NF91-4|SYNE1;nc|ENSG00000131018|Q8NF91-7|SYNE1;SYNE1|p.E4738Kfs*25|1|0.12|ENSG00000131018|chr6:152330474-152330474|T/-|frameshift_variant;SYNE1|p.E5862Gfs*83|1|0.12|ENSG00000131018|chr6:152300729-152300738|CCAGACTCCT/-|frameshift_variant;SYNE1|p.G6773Wfs*7|1|0.44|ENSG00000131018|chr6:152236186-152236187|-/A|frameshift_variant;SYNE1|p.K6871Rfs*22|2|0.52|ENSG00000131018|chr6:152233881-152233881|T/-|frameshift_variant;SYNE1|p.L8283Pfs*8|1|0.19|ENSG00000131018|chr6:152148173-152148174|-/G|frameshift_variant;SYNE1|p.M5602Nfs*13|2|0.32|ENSG00000131018|chr6:152310779-152310780|-/T|frameshift_variant;SYNE1|p.V8635Sfs*12|1|0.15|ENSG00000131018|chr6:152133375-152133375|T/-|frameshift_variant	44.377184641726394	0.36891676396732553	1				NaN	NaN	0	NaN	6205	4627	10831
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10835	33.35	NaN	914.25	30	0	257.81	0.106			+	47087	VLKLYRQK	8	38	349.8935241699219	NaN	0	349.8935241699219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VLKLYRQK_	REV__ENSG00000128829|ENST00000263791|EIF2AK4;REV__nc|ENSG00000128829|Q9P2K8-2|EIF2AK4	24.20275056022122	1.7418937515398478	1				NaN	NaN	0	NaN	6206	4627	10831
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10836	33.352	NaN	1042.7	30	0	172.74	0.106			+	50111	WGVCLVKL	8	48	459.26807647817685	NaN	0	459.267822265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_WGVCLVKL_	REV__ENST00000565062.5_1_16:90097706-90103159:+|nuORF	46.76643321282427	1.7418937515398478	1				NaN	NaN	0	NaN	6207	4627	10831
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10837	33.354	NaN	1131.3	30	0	145.97	0.106			+	38385	SRTPPQSAS	9	48	465.7366943359375	NaN	0	465.7366943359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SRTPPQSAS_	REV__ENST00000576250.5_1_16:3109019-3109328:-|nuORF	32.81241826257853	0.3119040447479903	1				NaN	NaN	0	NaN	6208	4627	10831
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10838	33.356	NaN	879.85	30	0	137.17	0.037	+			13827	GQRLCRCCVI	10	38	575.7839965820312	NaN	0	575.7839965820312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GQRLCRCCVI_	ENSG00000153558|ENST00000484457|FBXL2;ENST00000422741.5_1_3:33414627-33427097:+|nuORF;ENST00000432809.5_1_3:33339416-33427097:+|nuORF;ENST00000451636.5_1_3:33400471-33427097:+|nuORF;ENST00000464990.1_1_3:33425426-33427097:+|nuORF;nc|ENSG00000153558|Q9UKC9-2|FBXL2	20.83715455343099	0.4201028297492154	1				NaN	NaN	0	NaN	6209	4627	10831
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10849	33.382	NaN	7642	30	0	864.81	0.214	+			5801	AVIDVGINR	9	59	478.7794293832139	955.5443058332278	2	478.7793884277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVIDVGINR_	ENSG00000065911|ENST00000394053|MTHFD2;nc|ENSG00000065911|P13995-2|MTHFD2	62.107414245175825	0.1960472003779324	1				NaN	NaN	0	NaN	6217	4630	10848
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10850	33.385	NaN	2518.1	30	0	151.83	0.106	+			8119	DYMKTTSNF	9	70	553.7441594549857	1105.4737659767713	2	553.7447509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DYMKTTSNF_	ENSG00000165525|ENST00000298310|NEMF;nc|ENSG00000165525|O60524-3|NEMF;nc|ENSG00000165525|O60524-4|NEMF;NEMF|p.K641Rfs*9|1|0.15|ENSG00000165525|chr14:49802721-49802721|T/-|frameshift_variant;NEMF|p.M879*|1|0.12|ENSG00000165525|chr14:49789558-49789558|T/-|frameshift_variant;NEMF|p.M879Nfs*10|1|0.13|ENSG00000165525|chr14:49789557-49789558|-/T|frameshift_variant	96.0336014099291	0.047854655524928534	1				NaN	NaN	0	NaN	6218	4630	10848
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10851	33.387	NaN	1349.5	30	0	269.66	0.106				-1	LYLLHFPM	8	45	525.2792358398438	NaN	0	525.2792358398438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_LYLLHFPM(Oxidation (M))_	ENSG00000198610|ENST00000263126|AKR1C4	33.49298260027079	1.7418937515398478	1				NaN	NaN	0	NaN	6219	4630	10848
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10852	33.389	NaN	1356	30	0	135.26	0.106			+	-1	HCFFAKKL	8	56	518.2767244550114	1034.5388959768227	2	518.2786865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))HCFFAKKL_	REV__ENST00000396926.7_1_8:42010597-42012191:+|nuORF;REV__ENST00000522288.5_3_8:42010665-42012191:+|nuORF	35.200714571348534	0.6875396545722289	1				NaN	NaN	0	NaN	6220	4630	10848
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10853	33.391	NaN	1776.8	30	0	152.28	0.106	+			4011	ATCPQPWRY	9	54	589.7743240482791	1177.5340951633582	2	589.7740478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_ATC(Carbamidomethyl (C))PQPWRY_	ENC1|p.G499Vfs*26|1|0.12|ENSG00000171617|chr5:74634990-74634990|C/-|frameshift_variant;ENSG00000171617|ENST00000302351|ENC1;nc|ENSG00000171617|O14682-2|ENC1	56.72105179125745	0.24094814563026265	1				NaN	NaN	0	NaN	6221	4630	10848
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10854	33.392	NaN	2609.7	30	0	283.66	0.036	+			14768	GTKYIFMVK	9	60	543.8035940495932	1085.5926351659864	2	543.80419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTKYIFMVK_	ENSG00000101871|ENST00000317552|MID1;nc|ENSG00000101871|O15344-2|MID1	65.15724298150197	0.17062369902793603	1				NaN	NaN	0	NaN	6222	4630	10848
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10860	33.409	NaN	3271.3	30	0	538.83	0.214	+			14769	GTKYIFMVK	9	43	362.8717194548386	1085.593328964716	3	362.8721008300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTKYIFMVK_	ENSG00000101871|ENST00000317552|MID1;nc|ENSG00000101871|O15344-2|MID1	31.634271133179894	0.507608568980346	1				NaN	NaN	0	NaN	6225	4633	10859
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10861	33.412	NaN	961.09	30	0	327.83	0.106				-1	 	0	35	343.19741814770816	342.1901416811082	1	343.1976013183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	6226	4633	10859
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10862	33.414	NaN	1564.1	30	0	263.77	0.106	+			31333	QIRSSSCHSR	10	49	580.7837581486375	NaN	0	580.7847290039062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QIRSSSCHSR_	ENST00000439622.1_1_X:57148101-57148341:+|nuORF	28.5767321226876	0.40634399112407993	1				NaN	NaN	0	NaN	6227	4633	10859
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10863	33.416	NaN	892.98	30	0	95.948	0.106			+	-1	CLHGRAEAG	9	39	485.72955322265625	NaN	0	485.72955322265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_C(Carbamidomethyl (C))LHGRAEAG_	REV__LRRN4CL|p.F108Lfs*50|1|0.21|ENSG00000177363|chr11:62688187-62688188|-/G|frameshift_variant	30.503639358989545	0.3235605894931338	1				NaN	NaN	0	NaN	6228	4633	10859
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10864	33.418	NaN	1354	30	0	158.96	0.034			+	29639	PGGWGGLTSL	10	46	472.7454420313727	943.4763311295454	2	472.7459411621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PGGWGGLTSL_	REV__ENST00000598273.5_1_19:48283225-48283447:+|nuORF	35.61828744233558	0.588957954432594	1				NaN	NaN	0	NaN	6229	4633	10859
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10872	33.436	NaN	7418.3	30	0	1366.7	0.214	+			24249	LETLGQEKL	9	64	515.7926666013107	1029.5707802694212	2	515.7929077148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LETLGQEKL_	CON__H-INV:HIT000292931;CON__P05787;CON__Q9H552;ENSG00000170421|ENST00000692008|KRT8;ENST00000409686.2_1_9:102067468-102068890:+|nuORF;ENST00000450021.1_1_2:183936291-183936849:-|nuORF;ENST00000515599.1_1_5:146086275-146086944:-|nuORF;ENST00000550170.5_1_12:53294858-53298765:-|nuORF;ENST00000562022.1_1_15:43093683-43094592:-|nuORF;ENST00000562317.1_1_16:78082520-78083381:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	120.8684288430529	0.02067403653475984	1				NaN	NaN	0	NaN	6234	4636	10871
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10873	33.44	NaN	7087.9	30	0	629.36	0.106	+			43060	TELLIRKL	8	72	493.3236951555596	984.6328373779193	2	493.32403564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TELLIRKL_	ENSG00000132475|ENST00000254810|H3-3B;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000168148|ENST00000366696|H3-4;ENSG00000183598|ENST00000331491|H3C13;ENSG00000188375|ENST00000340398|H3-5;ENSG00000197153|ENST00000359303|H3C12;ENSG00000197409|ENST00000356476|H3C4;ENSG00000203811|ENST00000369158|H3C14;ENSG00000203852|ENST00000403683|H3C15;ENSG00000273983|ENST00000614378|H3C8;ENSG00000274750|ENST00000614911|H3C6;ENSG00000275379|ENST00000616365|H3C11;ENSG00000275714|ENST00000613854|H3C1;ENSG00000277775|ENST00000618052|H3C7;ENSG00000278828|ENST00000685041|H3C10;ENST00000401004.2_1:120904811-120905087:+|nuORF;ENST00000497682.1_1_3:109128527-109128830:-|nuORF;ENST00000586518.1_1_17:73774674-73775034:-|nuORF;nc|ENSG00000273213|Q5TEC6|H3-7	96.19043198914106	0.25873003980794995	1				NaN	NaN	0	NaN	6235	4636	10871
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10874	33.441	NaN	3067.5	30	0	903.05	0.106	+			13199	GIATTFINK	9	64	482.77648637793726	963.5384198226745	2	482.77655029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GIATTFINK_	ENSG00000183258|ENST00000330503|DDX41;ENST00000503078.5_1_5:176938794-176943460:-|nuORF;ENST00000505081.5_1_5:176938794-176940626:-|nuORF;ENST00000507900.5_1_5:176938794-176942272:-|nuORF	76.7741389293348	0.11149722112137898	1				NaN	NaN	0	NaN	6236	4636	10871
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10875	33.443	NaN	5138.4	30	0	1872.8	0.106				-1	 	0	55	329.2181791978131	984.6327081936392	3	329.2181701660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	6237	4636	10871
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10876	33.445	NaN	1659.5	30	0	230.69	0.106	+			7632	DKKDLTEVI	9	48	530.797682886412	1059.5808128396238	2	530.7978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DKKDLTEVI_	tr|U7SYX7|U7SYX7_FUSNUD-alanyl-D-alaninecarboxypeptidase(Penicillin-bindingprotein5/6)OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00797PE=3SV=1	58.2462437865262	0.22823408064396822	1				NaN	NaN	0	NaN	6238	4636	10871
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10877	33.447	NaN	1260.1	30	0	177.02	0.106			+	50568	YAVVKSALYK	10	53	571.3345262312059	NaN	0	571.333984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YAVVKSALYK_	REV__ENSG00000115183|ENST00000263635|TANC1;REV__nc|ENSG00000115183|Q9C0D5-2|TANC1;REV__TANC1|p.E735Lfs*10|1|0.14|ENSG00000115183|chr2:159178846-159178847|-/TC|frameshift_variant;REV__TANC1|p.E735Sfs*8|1|0.27|ENSG00000115183|chr2:159178847-159178850|TCTC/-|frameshift_variant	26.69291269510374	0.4125295221340092	1				NaN	NaN	0	NaN	6239	4636	10871
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10878	33.449	NaN	901.03	30	0	139.69	0.034				-1	TAEMTPIM	8	43	455.2081771755579	NaN	0	455.20794677734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_TAEMTPIM(Oxidation (M))_	nc|ENSG00000197696|P08949-2|NMB	37.028477286268924	1.7418937515398478	1				NaN	NaN	0	NaN	6240	4636	10871
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10884	33.465	NaN	7012.1	30	0	2052.2	0.214	+			40348	STTQVVGILK	10	59	523.3160163858498	1044.6174798384995	2	523.3158569335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STTQVVGILK_	ENSG00000198898|ENST00000361183|CAPZA2;ENST00000426421.5_1_7:116544367-116557918:+|nuORF	106.68306549817024	0.05784995512091477	1				NaN	NaN	0	NaN	6243	4639	10883
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10885	33.468	NaN	3383.1	30	0	1042.8	0.106			+	17446	IAVSGLNNLY	10	61	532.2925529751531	1062.570553017106	2	532.2926025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IAVSGLNNLY_	REV__ENST00000327535.5_1_1:24482054-24482345:-|nuORF	40.77816245573522	0.5419747034533848	1				NaN	NaN	0	NaN	6244	4639	10883
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10886	33.47	NaN	1560.7	30	0	285.39	0.106	+			26872	LWKAAELVVA	10	44	367.22072183109276	1098.6403360934783	3	367.2204895019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LWKAAELVVA_	ENST00000409197.5_1_2:172544266-172544377:+|nuORF	35.15202426646627	0.5927656479315102	1				NaN	NaN	0	NaN	6245	4639	10883
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10887	33.472	NaN	1254.1	30	0	169.53	0.106			+	50599	YDLYERFQ	8	45	567.2673950195312	NaN	0	567.2673950195312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YDLYERFQ_	REV__ENSG00000184967|ENST00000330579|NOC4L;REV__ENST00000535343.5_1_12:132632219-132636084:+|nuORF;REV__NOC4L|p.A205Pfs*13|2|0.34|ENSG00000184967|chr12:132147883-132147883|C/-|frameshift_variant;REV__NOC4L|p.A205Rfs*74|1|0.45|ENSG00000184967|chr12:132147882-132147883|-/C|frameshift_variant;REV__NOC4L|p.P381Lfs*103|1|0.35|ENSG00000184967|chr12:132151548-132151548|C/-|frameshift_variant	30.503639358989545	1.7418937515398478	1				NaN	NaN	0	NaN	6246	4639	10883
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10888	33.474	NaN	1514.5	30	0	198.6	0.106			+	-1	TIRQEPVL	8	43	499.2873282128305	996.560103492461	2	499.28765869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))TIRQEPVL_	REV__ANGPTL1|p.W318Lfs*22|1|0.15|ENSG00000116194|chr1:178853660-178853661|-/C|frameshift_variant;REV__ANGPTL1|p.Y51H|1|0.16|ENSG00000116194|chr1:178865626-178865626|A/G|missense_variant;REV__ENSG00000116194|ENST00000234816|ANGPTL1	34.172542307311794	0.6954784234644539	1				NaN	NaN	0	NaN	6247	4639	10883
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10889	33.476	NaN	2100.8	30	0	256.82	0.106			+	51048	YLEHISWPLVR	11	60	706.8890665791693	NaN	0	706.8884887695312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YLEHISWPLVR_	REV__ENSG00000168016|ENST00000645898|TRANK1;REV__nc|ENSG00000168016|O15050|TRANK1;REV__TRANK1|p.F2073Lfs*13|1|0.1|ENSG00000168016|chr3:36833232-36833232|A/-|frameshift_variant	18.262085536374414	0.456735970842152	1				NaN	NaN	0	NaN	6248	4639	10883
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10890	33.478	NaN	1396.4	30	0	181.8	0.036			+	20320	KEQFIKGDI	9	56	539.3003941551013	1076.5862353770026	2	540.7691040039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KEQFIKGDI_	REV__ENSG00000143669|ENST00000389793|LYST;REV__LYST|p.F2078Lfs*38|1|0.35|ENSG00000143669|chr1:235762739-235762739|A/-|frameshift_variant	32.81241826257853	0.4965981579233955	1				NaN	NaN	0	NaN	6249	4639	10883
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10899	33.498	NaN	60838	30	0	21518	0.214				-1	 	0	90	329.2181791978131	984.6327081936392	3	329.21826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	6255	4642	10898
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10900	33.501	NaN	6416	30	0	849.6	0.106	+			44313	TSFDGSLIQK	10	70	548.2871375922214	1094.5597222512426	2	548.2879638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TSFDGSLIQK_	ENSG00000177485|ENST00000557385|ZBTB33	129.42129120953632	0.014023551377083414	1				NaN	NaN	0	NaN	6256	4642	10898
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10901	33.503	NaN	1928.4	30	0	453.88	0.106				-1	 	0	45	378.27851714427703	754.5424813553541	2	378.2784118652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	6257	4642	10898
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10902	33.505	NaN	12095	30	0	5601.8	0.106	+			6665	AYVHMVTHF	9	59	368.8480831226762	1103.5224199682286	3	368.8484191894531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AYVHMVTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	50.0245360154114	0.3026755932229825	1				NaN	NaN	0	NaN	6258	4642	10898
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10903	33.507	NaN	4891.5	30	0	616.89	0.106	+			29162	NVIRDAVTY	9	63	525.7824681553706	1049.550383377541	2	525.782958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NVIRDAVTY_	ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2	72.87924865735499	0.12833875048249987	1				NaN	NaN	0	NaN	6259	4642	10898
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10904	33.509	NaN	1754.6	30	0	899.55	0.106			+	28593	NKLLVVAK	8	35	442.80021561728887	NaN	0	442.799560546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NKLLVVAK_	REV__ENST00000489671.5_2_3:141820662-141868333:-|nuORF	24.20275056022122	1.7418937515398478	1				NaN	NaN	0	NaN	6260	4642	10898
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10905	33.511	NaN	6322.1	30	0	590.27	0.036	+			6667	AYVHMVTHF	9	66	552.7678109922915	1103.521069051383	2	552.7677612304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AYVHMVTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	123.9887779854562	0.018785054595953452	1				NaN	NaN	0	NaN	6261	4642	10898
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10916	33.536	NaN	25598	30	0	3333.4	0.214	+			46555	VFIDKQTNL	9	72	539.3003941551013	1076.5862353770026	2	539.3006591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VFIDKQTNL_	ENSG00000048740|ENST00000633077|CELF2;ENSG00000149187|ENST00000687097|CELF1;nc|ENSG00000048740|O95319-2|CELF2;nc|ENSG00000048740|O95319-3|CELF2;nc|ENSG00000048740|O95319-4|CELF2;nc|ENSG00000048740|O95319-5|CELF2;nc|ENSG00000048740|O95319|CELF2;nc|ENSG00000149187|Q92879-2|CELF1;nc|ENSG00000149187|Q92879-3|CELF1;nc|ENSG00000149187|Q92879-4|CELF1;nc|ENSG00000149187|Q92879-5|CELF1;nc|ENSG00000149187|Q92879-6|CELF1;nc|ENSG00000149187|Q92879|CELF1	143.37361013837676	0.008897369944672323	1				NaN	NaN	0	NaN	6269	4645	10915
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10917	33.54	NaN	15256	30	0	4434.3	0.106	+			5209	ATTSVITIVK	10	77	516.8186810141702	1031.6228090951404	2	516.8187255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATTSVITIVK_	ENSG00000198517|ENST00000343242|MAFK	66.96192283764107	0.30252237217063654	1				NaN	NaN	0	NaN	6270	4645	10915
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10918	33.542	NaN	2551.9	30	0	414.88	0.106			+	14407	GTAPLVILSH	10	40	336.53413235945203	1006.5805676785561	3	336.5341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTAPLVILSH_	REV__ENST00000444374.1_1_9:92316696-92316852:+|nuORF	14.864876125193954	0.7409144161711139	1				NaN	NaN	0	NaN	6271	4645	10915
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10919	33.544	NaN	3145.8	30	0	465.52	0.106			+	33235	RGAAFMAF	8	53	435.7182323610065	869.4219117888131	2	435.7183532714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RGAAFMAF_	REV__tr|U7SXB4|U7SXB4_FUSNUTransketolaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00935PE=4SV=1	44.53106598305862	0.628196326904373	1				NaN	NaN	0	NaN	6272	4645	10915
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10920	33.545	NaN	3297.1	30	0	345.16	0.106				-1	VNALMKRLYM	10	67	627.837852449332	1253.661151965464	2	628.3397827148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_VNALM(Oxidation (M))KRLYM_	ENST00000380680.4_1_13:30339900-30340053:-|nuORF	27.882242232435846	0.6521336255503853	1				NaN	NaN	0	NaN	6273	4645	10915
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10921	33.547	NaN	1591.9	30	0	184.64	0.106	+			7140	DACTLAEKY	9	54	507.23310526250117	1012.4516575918024	2	507.23406982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DACTLAEKY_	ENSG00000146955|ENST00000537763|RAB19;nc|ENSG00000146955|A4D1S5-2|RAB19	39.252832667884924	0.4290233611298554	1				NaN	NaN	0	NaN	6274	4645	10915
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10922	33.549	NaN	1299.5	30	0	157.72	0.035	+			28930	NRKERSSY	8	46	520.2690919069919	1038.5236308807837	2	520.2696533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NRKERSSY_	ENSG00000152217|ENST00000649279|SETBP1	60.97194046774394	0.49215940876911696	1				NaN	NaN	0	NaN	6275	4645	10915
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10929	33.567	NaN	4386	30	0	400.35	0.214			+	495	ACALMAIVLG	10	61	481.26268177266354	960.5108106121271	2	481.26361083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ACALMAIVLG_	REV__tr|U7SKI7|U7SKI7_FUSNUGluconate:H+symporter(GntP)familytransporterOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02044PE=4SV=1	77.94384346573518	0.21241958424364343	1				NaN	NaN	0	NaN	6279	4648	10928
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10930	33.57	NaN	4089.5	30	0	334.21	0.106	+			36459	SEVMGEPHL	9	58	499.73406373085305	997.4535745285061	2	499.7348327636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEVMGEPHL_	ENSG00000132963|ENST00000380842|POMP	82.30502934623384	0.08758161712619916	1				NaN	NaN	0	NaN	6280	4648	10928
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10931	33.572	NaN	2366.9	30	0	405.73	0.106				-1	NQEKMIYF	8	51	544.7560214520112	1087.4974899708222	2	544.7571411132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_NQEKM(Oxidation (M))IYF_	BRSK2|p.P580Qfs*55|2|0.16|ENSG00000174672|chr11:1456410-1456410|G/-|frameshift_variant;BRSK2|p.R355Gfs*4|2|0.39|ENSG00000174672|chr11:1445650-1445650|C/-|frameshift_variant;ENSG00000174672|ENST00000528841|BRSK2;nc|ENSG00000174672|Q8IWQ3-2|BRSK2;nc|ENSG00000174672|Q8IWQ3-3|BRSK2;nc|ENSG00000174672|Q8IWQ3-4|BRSK2;nc|ENSG00000174672|Q8IWQ3-5|BRSK2;nc|ENSG00000174672|Q8IWQ3-6|BRSK2	30.503639358989545	0.7238069182250283	1				NaN	NaN	0	NaN	6281	4648	10928
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10932	33.574	NaN	1616	30	0	207.42	0.106	+			12931	GESQPVKMF	9	58	511.75253953481615	1021.4905261364323	2	511.7519226074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GESQPVKMF_	CLTC-CEP95|1|fusion;CLTC|p.A1374*|1|0.05|ENSG00000141367|chr17:59683464-59683465|-/TA|frameshift_variant;CLTC|p.D632Yfs*7|1|0.15|ENSG00000141367|chr17:59666589-59666590|-/TTACA|frameshift_variant;ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000141367|Q00610-2|CLTC	51.19269402634007	0.2889735674168909	1				NaN	NaN	0	NaN	6282	4648	10928
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10933	33.576	NaN	1977.1	30	0	331.32	0.106				-1	DVENLGCRL	9	32	359.17789410269404	NaN	0	359.17755126953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_DVENLGC(Carbamidomethyl (C))RL_	ENSG00000196510|ENST00000455511|ANAPC7;nc|ENSG00000196510|Q9UJX3-2|ANAPC7	19.1035232394073	0.3723251548669699	1				NaN	NaN	0	NaN	6283	4648	10928
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10934	33.578	NaN	1655.9	30	0	265.23	0.106			+	13607	GLWQQLAQL	9	52	528.7937445069958	1055.5729360807916	2	528.7945556640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GLWQQLAQL_	REV__nc|ENSG00000204614|Q6P9F5-2|TRIM40	44.377184641726394	0.36891676396732553	1				NaN	NaN	0	NaN	6284	4648	10928
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10935	33.58	NaN	635.52	30	0	56.772	0.035	+			17937	IGLVRSPLL	9	35	323.2148132324219	NaN	0	323.2148132324219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IGLVRSPLL_	ENSG00000111530|ENST00000545606|CAND1;nc|ENSG00000111530|Q86VP6-2|CAND1	10.265252068803164	0.4022383999429647	1				NaN	NaN	0	NaN	6285	4648	10928
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10942	33.597	NaN	4785.8	30	0	398.47	0.214	+			15538	GVDSSIFQNPK	11	69	596.3037527182948	1190.5929525033896	2	596.3040771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVDSSIFQNPK_	ENSG00000138303|ENST00000672957|ASCC1;nc|ENSG00000138303|Q8N9N2|ASCC1	142.36107225718385	0.00032120542358157484	1				NaN	NaN	0	NaN	6289	4651	10941
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10943	33.601	NaN	1810.9	30	0	259.15	0.106	+			40290	STSSHCLLY	9	53	505.73410037938265	1009.4536478255653	2	505.73370361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STSSHCLLY_	ENSG00000236287|ENST00000413761|ZBED5;ZBED5|p.N390Mfs*3|1|0.09|ENSG00000236287|chr11:10853777-10853777|T/-|frameshift_variant	40.5726180659479	0.4135428067754104	1				NaN	NaN	0	NaN	6290	4651	10941
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10944	33.603	NaN	2938.5	30	0	321.18	0.106			+	9307	EIAGYSRLL	9	66	511.2875270306035	1020.560501128007	2	511.28717041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EIAGYSRLL_	REV__ENSG00000145700|ENST00000506364|ANKRD31;REV__nc|ENSG00000145700|Q8N7Z5|ANKRD31	36.446750945000026	0.4619375763483977	1				NaN	NaN	0	NaN	6291	4651	10941
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10945	33.605	NaN	2032	30	0	312.91	0.035			+	28914	NQTHRHTH	8	54	515.7493131641996	1029.4840733951992	2	515.7490844726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NQTHRHTH_	REV__ENST00000498731.5_1_3:181458059-181458215:+|nuORF	35.61828744233558	0.6843154725607303	1				NaN	NaN	0	NaN	6292	4651	10941
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10957	33.641	NaN	3132.2	30	0	673.65	0.214				-1	 	0	46	564.3368069071108	1126.6590608810216	2	564.3384399414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	6298	4657	10956
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10958	33.645	NaN	1636.9	30	0	286.12	0.106				-1	ERDTCSWY	8	60	558.7238391372757	1115.4331253413513	2	558.7503051757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_ERDTC(Carbamidomethyl (C))SWY_	ENSG00000177943|ENST00000317446|MAMDC4;nc|ENSG00000177943|Q6UXC1-3|MAMDC4;nc|ENSG00000177943|Q6UXC1|MAMDC4	24.20275056022122	0.7724576178584145	1				NaN	NaN	0	NaN	6299	4657	10956
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10959	33.647	NaN	1290.9	30	0	195.13	0.037				-1	LCNNTGDPEM	10	56	583.7280538839076	NaN	0	583.7268676757812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_LC(Carbamidomethyl (C))NNTGDPEM(Oxidation (M))_	ENSG00000138085|ENST00000380171|ATRAID;nc|ENSG00000138085|Q6UW56-2|ATRAID;nc|ENSG00000138085|Q6UW56-3|ATRAID	31.529811441608018	0.39664753963064203	1				NaN	NaN	0	NaN	6300	4657	10956
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10965	33.663	NaN	2436.7	30	0	301.6	0.215	+			36868	SIFSKFTSK	9	66	522.7896833473491	1043.564813761498	2	522.7906494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIFSKFTSK_	ENSG00000072518|ENST00000402010|MARK2;nc|ENSG00000072518|Q7KZI7-10|MARK2;nc|ENSG00000072518|Q7KZI7-11|MARK2;nc|ENSG00000072518|Q7KZI7-12|MARK2;nc|ENSG00000072518|Q7KZI7-13|MARK2;nc|ENSG00000072518|Q7KZI7-14|MARK2;nc|ENSG00000072518|Q7KZI7-15|MARK2;nc|ENSG00000072518|Q7KZI7-16|MARK2;nc|ENSG00000072518|Q7KZI7-2|MARK2;nc|ENSG00000072518|Q7KZI7-3|MARK2;nc|ENSG00000072518|Q7KZI7-4|MARK2;nc|ENSG00000072518|Q7KZI7-5|MARK2;nc|ENSG00000072518|Q7KZI7-6|MARK2;nc|ENSG00000072518|Q7KZI7-7|MARK2;nc|ENSG00000072518|Q7KZI7-8|MARK2;nc|ENSG00000072518|Q7KZI7-9|MARK2	58.22992032128504	0.22837015374068087	1				NaN	NaN	0	NaN	6303	4660	10964
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10966	33.666	NaN	1411.2	30	0	165.67	0.106	+			12233	GASGEVPVGAL	11	49	478.7557017363763	955.4968505395526	2	478.755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GASGEVPVGAL_	ENST00000525829.1_1_8:12219536-12219971:+|nuORF	35.61828744233558	0.616184410043185	1				NaN	NaN	0	NaN	6304	4660	10964
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10967	33.668	NaN	1964.7	30	0	277.1	0.106	+			11197	FHKTGQEIYKQ	11	53	689.860595703125	NaN	0	689.860595703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FHKTGQEIYKQ_	ENSG00000154710|ENST00000284957|RABGEF1;nc|ENSG00000154710|Q9UJ41-3|RABGEF1;nc|ENSG00000154710|Q9UJ41-4|RABGEF1	21.0322348234405	0.456735970842152	1				NaN	NaN	0	NaN	6305	4660	10964
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10968	33.67	NaN	1447.6	30	0	239.24	0.106	+			12448	GEDEPLHAL	9	49	490.73763224558	979.46071155796	2	490.73748779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEDEPLHAL_	ENSG00000168066|ENST00000377390|SF1;nc|ENSG00000168066|Q15637-2|SF1;nc|ENSG00000168066|Q15637-3|SF1;nc|ENSG00000168066|Q15637-4|SF1;nc|ENSG00000168066|Q15637-5|SF1;nc|ENSG00000168066|Q15637-6|SF1;nc|ENSG00000168066|Q15637-7|SF1;SF1|p.V573Sfs*23|1|0.22|ENSG00000168066|chr11:64766025-64766025|G/-|frameshift_variant	38.80614096846853	0.43426287593479557	1				NaN	NaN	0	NaN	6306	4660	10964
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10969	33.672	NaN	1736.8	30	0	109.32	0.04				-1	CCCSCRSAHCT	11	59	672.721511186856	1343.428469440512	2	673.2240600585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	3 Carbamidomethyl (C)	_C(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))SCRSAHCT_	ENST00000272983.12_1_2:242089191-242089476:+|nuORF	14.137123925751023	0.8042936413770803	1				NaN	NaN	0	NaN	6307	4660	10964
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10975	33.687	NaN	4279.7	30	0	1658.5	0.214	+			17984	IHLHHLKM	8	68	514.7942966181905	1027.574040303181	2	514.7945556640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IHLHHLKM_	ENSG00000131845|ENST00000282286|ZNF304;ZNF304|p.H297R|1|0.12|ENSG00000131845|chr19:57356759-57356759|A/G|missense_variant	39.021493756699265	0.6623843612266921	1				NaN	NaN	0	NaN	6310	4663	10974
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10976	33.69	NaN	2961.8	30	0	301.45	0.106	+			43192	TEVGEKIAL	9	61	480.2736984306147	958.5328439280294	2	480.2734680175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEVGEKIAL_	ENSG00000130741|ENST00000253039|EIF2S3;ENSG00000180574|ENST00000538173|EIF2S3B;ENST00000460032.1_1_X:24091216-24091381:+|nuORF	53.08895987439943	0.27122541748218487	1				NaN	NaN	0	NaN	6311	4663	10974
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10977	33.692	NaN	2818.4	30	0	1497.7	0.106	+			7597	DIVLTHSLF	9	49	348.8622453266635	1043.5649065801906	3	348.8623962402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DIVLTHSLF_	ENSG00000108352|ENST00000620260|RAPGEFL1;nc|ENSG00000108352|Q9UHV5-3|RAPGEFL1;nc|ENSG00000108352|Q9UHV5|RAPGEFL1	24.20275056022122	0.577060078256802	1				NaN	NaN	0	NaN	6312	4663	10974
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10978	33.694	NaN	3291.3	30	0	670.17	0.106	+			32617	QYNPKFQTL	9	67	569.7977021260713	1137.5808513189425	2	570.3001708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QYNPKFQTL_	ENSG00000116580|ENST00000368331|GON4L;ENSG00000163374|ENST00000355499|YY1AP1;ENST00000436865.5_1_1:155629450-155649007:-|nuORF;ENST00000496324.5_1_1:155642327-155650230:-|nuORF;GON4L|p.E1831Rfs*8|1|0.18|ENSG00000116580|chr1:155756984-155756985|-/T|frameshift_variant;GON4L|p.P1077Lfs*24|1|0.34|ENSG00000116580|chr1:155766243-155766243|G/-|frameshift_variant;nc|ENSG00000116580|Q3T8J9-2|GON4L;nc|ENSG00000116580|Q3T8J9-3|GON4L;nc|ENSG00000163374|Q9H869-3|YY1AP1;nc|ENSG00000163374|Q9H869-4|YY1AP1;nc|ENSG00000163374|Q9H869-5|YY1AP1;nc|ENSG00000163374|Q9H869-6|YY1AP1;nc|ENSG00000163374|Q9H869-8|YY1AP1;nc|ENSG00000163374|Q9H869-9|YY1AP1;nc|ENSG00000163374|Q9H869|YY1AP1	96.19043198914106	0.047412499214244314	1				NaN	NaN	0	NaN	6313	4663	10974
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10979	33.696	NaN	1705	30	0	166.84	0.036			+	6756	CEAKFLVSAV	10	59	533.7838525853708	1065.5531522375416	2	533.282470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_CEAKFLVSAV_	REV__ENSG00000164331|ENST00000296785|ANKRA2;REV__ENST00000515804.1_1_5:72853376-72858706:-|nuORF	30.317721548370564	0.6322445173429027	1				NaN	NaN	0	NaN	6314	4663	10974
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10987	33.716	NaN	31579	30	0	4880.2	0.214	+			6580	AYLHTTTTF	9	81	527.7638036505535	1053.513054367907	2	527.7639770507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AYLHTTTTF_	ABCC3|p.L968Afs*31|1|0.33|ENSG00000108846|chr17:50675920-50675921|-/G|frameshift_variant;ENSG00000108846|ENST00000285238|ABCC3;ENST00000502426.5_1_17:48736553-48755440:+|nuORF;nc|ENSG00000108846|O15438-2|ABCC3;nc|ENSG00000108846|O15438-4|ABCC3;nc|ENSG00000108846|O15438-5|ABCC3	183.89449425832993	0.0009050816331735681	1				NaN	NaN	0	NaN	6319	4666	10986
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10988	33.719	NaN	2458.2	30	0	212.53	0.106			+	9311	EIDGAVKEVL	10	62	536.7977063179845	1071.580859702769	2	536.7978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EIDGAVKEVL_	REV__ENSG00000007402|ENST00000424201|CACNA2D2;REV__ENST00000487413.1_1_3:50453473-50541058:-|nuORF;REV__nc|ENSG00000007402|Q9NY47-3|CACNA2D2;REV__nc|ENSG00000007402|Q9NY47-4|CACNA2D2;REV__nc|ENSG00000007402|Q9NY47-5|CACNA2D2;REV__nc|ENSG00000007402|Q9NY47|CACNA2D2	79.07001860377117	0.20321883041390024	1				NaN	NaN	0	NaN	6320	4666	10986
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10989	33.721	NaN	2229.7	30	0	264.67	0.106	+			12915	GESGLGKSTLI	11	60	531.2961234330531	1060.5776939329062	2	531.29638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GESGLGKSTLI_	ENSG00000122545|ENST00000350320|SEPTIN7;ENSG00000168385|ENST00000391971|SEPTIN2;ENSG00000180096|ENST00000321367|SEPTIN1;ENST00000366210.2_1_2:242263647-242276275:+|nuORF;ENST00000425198.1_1_7:35872473-35938044:+|nuORF;ENST00000467971.5_1_2:242255375-242276932:+|nuORF;ENST00000484740.1_1_2:242255375-242274650:+|nuORF;ENST00000494824.5_1_2:242255375-242275396:+|nuORF;ENST00000563743.1_1_16:30393079-30393866:-|nuORF;ENST00000563957.6_1_16:30392598-30394125:-|nuORF;nc|ENSG00000122545|Q16181-2|SEPTIN7;nc|ENSG00000168385|Q15019-2|SEPTIN2;nc|ENSG00000168385|Q15019-3|SEPTIN2;nc|ENSG00000180096|Q8WYJ6-2|SEPTIN1	56.55063890039881	0.3542454156878057	1				NaN	NaN	0	NaN	6321	4666	10986
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10990	33.723	NaN	2559.4	30	0	199.03	0.036			+	-1	MSKNTKKDK	9	57	548.294262166546	1094.573971399892	2	548.29443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_M(Oxidation (M))SKNTKKDK_	REV__ENSG00000150054|ENST00000683449|MPP7;REV__nc|ENSG00000150054|Q5T2T1-2|MPP7	51.19269402634007	0.2889735674168909	1				NaN	NaN	0	NaN	6322	4666	10986
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10998	33.743	NaN	18237	30	0	3143.6	0.214	+			36038	SEISNIARV	9	79	494.7745381985176	987.5345234638352	2	494.7745056152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEISNIARV_	ENSG00000016490|ENST00000394711|CLCA1	129.42129120953632	0.01549634589885217	1				NaN	NaN	0	NaN	6327	4669	10997
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	10999	33.746	NaN	4803.3	30	0	1084.7	0.036	+			45626	TYQQVQQTL	9	64	554.7850097209241	1107.5554665086481	2	554.7862548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TYQQVQQTL_	ENSG00000126254|ENST00000262633|RBM42;nc|ENSG00000126254|Q9BTD8-2|RBM42;nc|ENSG00000126254|Q9BTD8-3|RBM42;nc|ENSG00000126254|Q9BTD8-4|RBM42	106.68306549817024	0.032382560583716295	1				NaN	NaN	0	NaN	6328	4669	10997
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11003	33.761	NaN	4322.8	30	0	598.99	0.214			+	15882	GYSALREM	8	55	463.7235434249891	925.4325339167782	2	463.72332763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GYSALREM_	REV__ENSG00000086696|ENST00000199936|HSD17B2	65.80317337860623	0.44433089765398776	1				NaN	NaN	0	NaN	6329	4672	11002
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11004	33.764	NaN	1750.9	30	0	413.68	0.106	+			46114	VDGLIYNR	8	43	475.25853511634637	948.5025172994928	2	475.25823974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VDGLIYNR_	ENST00000435074.5_1_6:33080250-33086274:+|nuORF	31.954861631926434	0.7126016770032289	1				NaN	NaN	0	NaN	6330	4672	11002
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11005	33.766	NaN	1377.4	30	0	194.73	0.032				-1	 	0	34	402.7580531748269	803.5015534164538	2	402.7580871582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	6331	4672	11002
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11012	33.784	NaN	2965.8	30	0	290.04	0.214	+			45494	TYDSVTDKF	9	68	538.250529640371	1074.486506347542	2	538.2511596679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TYDSVTDKF_	ENSG00000115464|ENST00000398571|USP34;ENST00000463046.5_1_2:61463458-61483580:-|nuORF;nc|ENSG00000115464|Q70CQ2-2|USP34;nc|ENSG00000115464|Q70CQ2-3|USP34;USP34|p.L2716Sfs*30|1|0.05|ENSG00000115464|chr2:61214596-61214597|-/AAGCTGA|frameshift_variant;USP34|p.L3228*|1|0.22|ENSG00000115464|chr2:61190564-61190564|A/-|frameshift_variant	90.60085204095205	0.06317133949006545	1				NaN	NaN	0	NaN	6335	4675	11011
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11013	33.788	NaN	2463.6	30	0	397.02	0.106			+	7346	DCAHAVAGLR	10	53	506.75393052505547	1011.493308116911	2	506.75347900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DCAHAVAGLR_	REV__ENST00000489264.2_1_10:75533373-75538679:+|nuORF	27.882242232435846	0.6521336255503853	1				NaN	NaN	0	NaN	6336	4675	11011
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11014	33.789	NaN	1729.2	30	0	190.14	0.106			+	-1	MNMFMDGSN	9	52	531.6874521269117	NaN	0	531.6883544921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_MNM(Oxidation (M))FMDGSN_	REV__ENSG00000167081|ENST00000373489|PBX3;REV__nc|ENSG00000167081|P40426-3|PBX3;REV__nc|ENSG00000167081|P40426-5|PBX3	18.262085536374414	0.37517301184500873	1				NaN	NaN	0	NaN	6337	4675	11011
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11015	33.791	NaN	1196.4	30	0	369.08	0.106				-1	 	0	31	329.2181791978131	984.6327081936392	3	329.21826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	6338	4675	11011
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11016	33.793	NaN	1523.2	30	0	166.95	0.106				-1	 	0	42	402.7580531748269	803.5015534164538	2	402.75830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	6339	4675	11011
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11017	33.795	NaN	1894.9	30	0	461.19	0.106			+	13445	GLIEVQKLLAD	11	35	400.23995977977535	1197.698049939526	3	400.23980712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GLIEVQKLLAD_	REV__ENSG00000135436|ENST00000257894|FAM186B;REV__ENST00000533372.1_1_12:49976813-49999059:-|nuORF;REV__nc|ENSG00000135436|Q8IYM0-2|FAM186B	26.063383197487333	0.7164075632144343	1				NaN	NaN	0	NaN	6340	4675	11011
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11018	33.797	NaN	1492.3	30	0	285.05	0.034	+			33915	RRTGQVGPT	9	57	486.27288818359375	NaN	0	486.27288818359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RRTGQVGPT_	ENSG00000172927|ENST00000441339|MYEOV	31.529811441608018	0.3183796599642538	1				NaN	NaN	0	NaN	6341	4675	11011
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11024	33.813	NaN	1671.1	30	0	330.81	0.214	+			1281	AESKNGWTL	9	53	503.2536310818558	1004.4927092305117	2	503.25323486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AESKNGWTL_	ENSG00000110048|ENST00000263847|OSBP	52.936696900407355	0.27249468807391813	1				NaN	NaN	0	NaN	6344	4678	11023
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11025	33.816	NaN	1312.8	30	0	213.36	0.034			+	11398	FLPEVPLK	8	50	471.78433613959805	NaN	0	471.78399658203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FLPEVPLK_	REV__ENST00000357066.7_1_19:2071661-2071847:-|nuORF	40.77816245573522	1.7418937515398478	1				NaN	NaN	0	NaN	6345	4678	11023
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11032	33.835	NaN	3003	30	0	499.3	0.214	+			50961	YIHVGAQL	8	58	450.75039376055213	899.4862345879043	2	450.75018310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YIHVGAQL_	ENSG00000176658|ENST00000318217|MYO1D	83.28718786952967	0.2977916691876266	1				NaN	NaN	0	NaN	6349	4681	11031
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11033	33.838	NaN	3042.9	30	0	547.7	0.106	+			11803	FSSALWPFS	9	60	521.254978823721	1040.4954047142419	2	521.2562866210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FSSALWPFS_	tr|U7T180|U7T180_FUSNUValine--tRNAligaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=valSPE=3SV=1	58.78195531508484	0.22376836668196862	1				NaN	NaN	0	NaN	6350	4681	11031
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11034	33.84	NaN	2029.5	30	0	257.1	0.106	+			15621	GVLAWVKEK	9	65	515.3079001056584	1028.6012472781167	2	515.307373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GVLAWVKEK_	ENSG00000008517|ENST00000525643|IL32;nc|ENSG00000008517|P24001-3|IL32;nc|ENSG00000008517|P24001-5|IL32;nc|ENSG00000008517|P24001-6|IL32;nc|ENSG00000008517|P24001-7|IL32;nc|ENSG00000008517|P24001|IL32	42.86426827375447	0.38666266728046506	1				NaN	NaN	0	NaN	6351	4681	11031
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11035	33.842	NaN	813.75	30	0	104	0.033			+	33819	RQSSPVTP	8	37	436.23565790357503	NaN	0	436.23577880859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RQSSPVTP_	REV__CC2D1B|p.F769Afs*5|1|0.54|ENSG00000154222|chr1:52354893-52354894|-/CC|frameshift_variant;REV__CC2D1B|p.L517Cfs*53|1|0.58|ENSG00000154222|chr1:52357829-52357829|G/-|frameshift_variant;REV__ENSG00000154222|ENST00000284376|CC2D1B;REV__ENST00000460261.5_1_1:52822810-52825784:-|nuORF;REV__ENST00000491136.6_1_1:52820057-52823576:-|nuORF;REV__nc|ENSG00000154222|Q5T0F9-3|CC2D1B;REV__nc|ENSG00000154222|Q5T0F9|CC2D1B	21.9598887501803	1.7418937515398478	1				NaN	NaN	0	NaN	6352	4681	11031
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11045	33.864	NaN	6846.7	30	0	2115.4	0.214	+			47374	VPHSIINGY	9	62	500.2663528701389	998.5181528070779	2	500.2663269042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VPHSIINGY_	ENSG00000089157|ENST00000392514|RPLP0;nc|ENSG00000089157|P05388-2|RPLP0;nc|ENSG00000213553|Q8NHW5|RPLP0P6	106.41520541750704	0.03265588207292361	1				NaN	NaN	0	NaN	6359	4684	11044
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11046	33.867	NaN	4090.2	30	0	778.3	0.106	+			5986	AVLSWKLAK	9	69	508.31859630086126	1014.6226396685225	2	508.31829833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVLSWKLAK_	ENSG00000188725|ENST00000339020|SMIM15;SMIM15|p.M47T|1|0.4|ENSG00000188725|chr5:61160032-61160032|A/G|missense_variant	60.11826168202944	0.21262886028301267	1				NaN	NaN	0	NaN	6360	4684	11044
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11047	33.869	NaN	6648.8	30	0	3097.9	0.106	+			6666	AYVHMVTHF	9	47	368.8480831226762	1103.5224199682286	3	368.8479919433594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AYVHMVTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	42.47446043378293	0.39123495718708534	1				NaN	NaN	0	NaN	6361	4684	11044
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11048	33.871	NaN	2917.4	30	0	341.56	0.106	+			6668	AYVHMVTHF	9	62	552.7678109922915	1103.521069051383	2	552.7687377929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AYVHMVTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	123.9887779854562	0.018785054595953452	1				NaN	NaN	0	NaN	6362	4684	11044
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11049	33.873	NaN	1744.3	30	0	278.56	0.106	+			49428	VVVDPIQSVK	10	53	542.3237797914189	1082.6330066496378	2	542.3243408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVVDPIQSVK_	ENSG00000115233|ENST00000409682|PSMD14	53.08895987439943	0.42869529153390606	1				NaN	NaN	0	NaN	6363	4684	11044
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11050	33.875	NaN	1203.6	30	0	100.64	0.106	+			17389	IAPFLNAK	8	52	437.2633882282361	NaN	0	437.2633361816406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IAPFLNAK_	tr|U7SMP1|U7SMP1_FUSNUNodBhomologydomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01766PE=4SV=1	37.028477286268924	1.7418937515398478	1				NaN	NaN	0	NaN	6364	4684	11044
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11051	33.876	NaN	1385.6	30	0	170.7	0.034	+			1402	AEVSVPKEL	9	51	486.2730712890625	NaN	0	486.2730712890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AEVSVPKEL_	ENSG00000111144|ENST00000228740|LTA4H;ENST00000548852.5_1_12:96397735-96429337:-|nuORF;ENST00000553041.5_1_12:96414526-96429297:-|nuORF;nc|ENSG00000111144|P09960-2|LTA4H;nc|ENSG00000111144|P09960-3|LTA4H;nc|ENSG00000111144|P09960-4|LTA4H	39.252832667884924	0.27938773122138094	1				NaN	NaN	0	NaN	6365	4684	11044
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11060	33.898	NaN	1753.6	30	0	264.94	0.214	+			824	AEGEIYTKL	9	66	512.2717306188439	1022.5289083044878	2	512.271728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEGEIYTKL_	ENSG00000138190|ENST00000260762|EXOC6;EXOC6|p.L640Ffs*39|1|0.37|ENSG00000138190|chr10:92974192-92974193|-/T|frameshift_variant;nc|ENSG00000138190|Q8TAG9-2|EXOC6	68.84614121027924	0.14577793175421136	1				NaN	NaN	0	NaN	6371	4687	11059
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11061	33.902	NaN	4207.6	30	0	345.13	0.106	+			39639	STIEYVIQR	9	74	554.8029098654978	1107.5912667977955	2	554.8034057617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STIEYVIQR_	ENSG00000101310|ENST00000650089|SEC23B	166.67852932204877	0.003333876602083393	1				NaN	NaN	0	NaN	6372	4687	11059
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11062	33.904	NaN	1701.4	30	0	375.19	0.106			+	35585	SAYKNKIAI	9	33	336.53413235945203	1006.5805676785561	3	336.53424072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAYKNKIAI_	REV__ENSG00000157456|ENST00000288207|CCNB2	12.959181472943097	0.6112419832031292	1				NaN	NaN	0	NaN	6373	4687	11059
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11063	33.905	NaN	1781.8	30	0	193.89	0.106	+			26889	LWRSRVVPDRE	11	55	706.8890665791693	NaN	0	706.88720703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LWRSRVVPDRE_	ENSG00000137834|ENST00000288840|SMAD6;nc|ENSG00000137834|O43541-4|SMAD6	16.71738777980365	0.456735970842152	1				NaN	NaN	0	NaN	6374	4687	11059
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11064	33.907	NaN	1410.2	30	0	190.91	0.033			+	33530	RLAAVAEL	8	40	421.75771018192256	841.5008674306451	2	421.7562255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RLAAVAEL_	REV__ENST00000481869.1_1_1:934427-935027:-|nuORF	45.9519527083369	0.6193794311207887	1				NaN	NaN	0	NaN	6375	4687	11059
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11073	33.939	NaN	2282.3	30	0	257.59	0.214	+			41280	SVLLFVTKK	9	62	517.8340886453177	1033.6536243574353	2	517.8341674804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVLLFVTKK_	ENSG00000198231|ENST00000389924|DDX42;ENST00000578593.1_1_17:61889231-61895755:+|nuORF;nc|ENSG00000198231|Q86XP3-2|DDX42	68.84614121027924	0.14577793175421136	1				NaN	NaN	0	NaN	6378	4693	11072
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11074	33.943	NaN	3334.5	30	0	517.06	0.037			+	43498	TGQTIVQITGK	11	60	573.3296148544089	1144.6446767756177	2	573.8319702148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TGQTIVQITGK_	REV__ENSG00000092621|ENST00000641023|PHGDH;REV__ENST00000482968.1_1_1:120282927-120286660:+|nuORF	70.39856735676683	0.2324169829117963	1				NaN	NaN	0	NaN	6379	4693	11072
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11079	33.957	NaN	6189.2	30	0	990.4	0.214			+	9586	ELKEGNNVL	9	62	508.2747231895029	1014.5348934458058	2	508.2744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ELKEGNNVL_	REV__ENSG00000189091|ENST00000302516|SF3B3;REV__ENST00000562722.1_1_16:70597761-70599451:+|nuORF;REV__nc|ENSG00000189091|Q15393-3|SF3B3	56.43379154798735	0.2433427591689151	1				NaN	NaN	0	NaN	6381	4696	11078
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11080	33.961	NaN	4575.7	30	0	831.27	0.106	+			34880	RYVMTTTTL	9	62	543.286632035514	1084.558711137828	2	543.2871704101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RYVMTTTTL_	ENSG00000134001|ENST00000256383|EIF2S1	77.31757898189308	0.1091473830098891	1				NaN	NaN	0	NaN	6382	4696	11078
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11081	33.963	NaN	1571.2	30	0	174.74	0.038	+			42067	SYASLQQNKW	10	55	612.8033439315521	NaN	0	612.8035888671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SYASLQQNKW_	ENSG00000104133|ENST00000261866|SPG11;nc|ENSG00000104133|Q96JI7-2|SPG11;nc|ENSG00000104133|Q96JI7-3|SPG11;SPG11|p.L950Wfs*13|2|0.21|ENSG00000104133|chr15:44615552-44615552|A/-|frameshift_variant	54.722347961057174	0.27574710963839943	1				NaN	NaN	0	NaN	6383	4696	11078
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11087	33.979	NaN	11285	30	0	3572.3	0.214				-1	 	0	72	564.3368069071108	1126.6590608810216	2	564.3373413085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	6386	4699	11086
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11088	33.983	NaN	9118.7	30	0	1427.2	0.106	+			36315	SESLPVRTL	9	71	501.28488499839045	1000.5552170635809	2	501.28485107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SESLPVRTL_	ENSG00000075420|ENST00000415807|FNDC3B;FNDC3B|p.T1056Hfs*16|1|0.43|ENSG00000075420|chr3:172378419-172378420|-/C|frameshift_variant	101.25262130126117	0.03792372629710479	1				NaN	NaN	0	NaN	6387	4699	11086
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11089	33.985	NaN	2925.9	30	0	602.19	0.106			+	9676	ELVKGGVLA	9	52	443.27372918251706	884.5329054318341	2	443.2736511230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ELVKGGVLA_	REV__ENST00000490912.5_1_7:26240373-26240535:-|nuORF	69.6276240434122	0.14239879520340665	1				NaN	NaN	0	NaN	6388	4699	11086
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11090	33.986	NaN	3050.5	30	0	649.52	0.106			+	16570	HFIMATGPSR	10	63	566.7830953806562	NaN	0	566.7833251953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_HFIM(Oxidation (M))ATGPSR_	REV__ENSG00000143552|ENST00000368559|NUP210L;REV__nc|ENSG00000143552|Q5VU65-2|NUP210L;REV__NUP210L|p.F1858Lfs*11|1|0.38|ENSG00000143552|chr1:153992928-153992928|A/-|frameshift_variant	69.6276240434122	0.15565754179716834	1				NaN	NaN	0	NaN	6389	4699	11086
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11091	33.988	NaN	2161.7	30	0	190.98	0.106	+			36467	SEVQDRVML	9	64	538.7736180408983	1075.5326831485966	2	538.7740478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SEVQDRVML_	ENSG00000119801|ENST00000261353|YPEL5	58.22992032128504	0.22837015374068087	1				NaN	NaN	0	NaN	6390	4699	11086
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11092	33.99	NaN	1735.3	30	0	513.35	0.106	+			13646	GMPVSPAP	8	44	378.19083023814267	NaN	0	378.1910095214844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GMPVSPAP_	ENST00000476881.2_1_7:100174203-100174533:-|nuORF;ENST00000485071.2_1_7:100173012-100174533:-|nuORF	37.028477286268924	1.7418937515398478	1				NaN	NaN	0	NaN	6391	4699	11086
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11093	33.992	NaN	1263.1	30	0	229.15	0.038			+	-1	FAKGCEKCTY	10	43	603.76513671875	NaN	0	603.76513671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_FAKGC(Carbamidomethyl (C))EKCTY_	REV__ENSG00000130818|ENST00000253115|ZNF426;REV__ENSG00000170954|ENST00000243643|ZNF415;REV__ENSG00000185947|ENST00000300870|ZNF267;REV__ENSG00000254004|ENST00000523638|ZNF260;REV__ENST00000575471.2_1_16:31925765-31927799:+|nuORF;REV__nc|ENSG00000170954|Q09FC8-2|ZNF415;REV__nc|ENSG00000170954|Q09FC8-3|ZNF415;REV__nc|ENSG00000170954|Q09FC8-4|ZNF415;REV__nc|ENSG00000170954|Q09FC8-6|ZNF415;REV__nc|ENSG00000170954|Q09FC8|ZNF415	23.52269567125451	0.42010282974921537	1				NaN	NaN	0	NaN	6392	4699	11086
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11104	34.017	NaN	3856.7	30	0	307.71	0.214	+			13857	GQWKKGFVL	9	68	531.8085776313347	1061.6026023294694	2	531.808837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GQWKKGFVL_	ENSG00000142864|ENST00000361219|SERBP1;ENST00000484880.1_1_1:67885652-67890638:-|nuORF;nc|ENSG00000142864|Q8NC51-2|SERBP1;nc|ENSG00000142864|Q8NC51-4|SERBP1;nc|ENSG00000142864|Q8NC51|SERBP1	71.29570347882199	0.13518600952103718	1				NaN	NaN	0	NaN	6400	4702	11103
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11105	34.021	NaN	2118.8	30	0	461.61	0.106	+			5228	ATVAAILQH	9	55	462.269126376197	922.523699819194	2	462.2689208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATVAAILQH_	ENSG00000183340|ENST00000332349|JRKL;JRKL|p.D446Gfs*26|1|0.07|ENSG00000183340|chr11:96391985-96391986|-/GTTTTACT|frameshift_variant	87.69643885390035	0.07135982304947239	1				NaN	NaN	0	NaN	6401	4702	11103
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11106	34.023	NaN	1095.6	30	0	285.83	0.034	+			3298	ASLSLTLQK	9	47	480.7891795112686	959.5638060893373	2	480.79052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASLSLTLQK_	ENSG00000100242|ENST00000689035|SUN2;nc|ENSG00000100242|Q9UH99-2|SUN2;nc|ENSG00000100242|Q9UH99-3|SUN2	65.46538089061403	0.16805504838372562	1				NaN	NaN	0	NaN	6402	4702	11103
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11117	34.059	NaN	2437.4	30	0	237.49	0.214	+			46395	VELSAGNIVN	10	58	508.2747231895029	1014.5348934458058	2	508.2735290527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VELSAGNIVN_	ENSG00000078269|ENST00000355585|SYNJ2;nc|ENSG00000078269|O15056-2|SYNJ2;nc|ENSG00000078269|O15056-3|SYNJ2;SYNJ2|p.L1226Tfs*32|1|0.22|ENSG00000078269|chr6:158093029-158093030|-/C|frameshift_variant;SYNJ2|p.P1225Hfs*19|1|0.23|ENSG00000078269|chr6:158093030-158093030|C/-|frameshift_variant	53.08895987439943	0.42869529153390606	1				NaN	NaN	0	NaN	6407	4708	11116
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11118	34.063	NaN	1070.2	30	0	160.78	0.036			+	-1	LFSNMTQAK	9	55	528.2652556714786	NaN	0	528.265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LFSNM(Oxidation (M))TQAK_	REV__HIC2|p.R161Afs*113|1|0.18|ENSG00000169635|chr22:21445370-21445370|C/-|frameshift_variant	35.61828744233558	0.29773779453147337	1				NaN	NaN	0	NaN	6408	4708	11116
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11123	34.077	NaN	1205.4	30	0	141.08	0.143	+			36039	SEISNIARV	9	54	494.7745381985176	987.5345234638352	2	494.7738952636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEISNIARV_	ENSG00000016490|ENST00000394711|CLCA1	51.19269402634007	0.2889735674168909	1				NaN	NaN	0	NaN	6410	4711	11122
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11129	34.095	NaN	2687.4	30	0	773.25	0.215	+			37001	SIPKNIQSL	9	54	500.2950635806228	998.5755742280456	2	500.295166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIPKNIQSL_	ENSG00000110080|ENST00000444328|ST3GAL4;nc|ENSG00000110080|Q11206-2|ST3GAL4;nc|ENSG00000110080|Q11206-3|ST3GAL4;nc|ENSG00000110080|Q11206-4|ST3GAL4;nc|ENSG00000110080|Q11206-5|ST3GAL4;nc|ENSG00000110080|Q11206-6|ST3GAL4;nc|ENSG00000110080|Q11206-7|ST3GAL4	31.529811441608018	0.5085848003137583	1				NaN	NaN	0	NaN	6413	4714	11128
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11130	34.099	NaN	1570.1	30	0	169.88	0.106			+	25705	LRMFYHCI	8	57	541.7666223564315	1081.518691779663	2	542.2640380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LRMFYHCI_	REV__ENSG00000068903|ENST00000249396|SIRT2;REV__nc|ENSG00000068903|Q8IXJ6-2|SIRT2;REV__nc|ENSG00000068903|Q8IXJ6-3|SIRT2;REV__nc|ENSG00000068903|Q8IXJ6-4|SIRT2;REV__nc|ENSG00000068903|Q8IXJ6-5|SIRT2	29.841539824830324	0.7289191502596711	1				NaN	NaN	0	NaN	6414	4714	11128
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11131	34.101	NaN	1403	30	0	111.03	0.106	+			27155	MCISVKEGIA	10	54	525.7682611778213	NaN	0	525.7681274414062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MCISVKEGIA_	ENSG00000167723|ENST00000576742|TRPV3;nc|ENSG00000167723|Q8NET8-2|TRPV3;nc|ENSG00000167723|Q8NET8-3|TRPV3	51.19269402634007	0.2980620950593832	1				NaN	NaN	0	NaN	6415	4714	11128
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11132	34.103	NaN	886.34	30	0	117	0.034			+	26028	LSLGAAISAL	10	43	458.27864236927604	NaN	0	458.27838134765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSLGAAISAL_	REV__ENSG00000160886|ENST00000292430|LY6K;REV__ENST00000522591.1_2_8:143784477-143784786:+|nuORF	32.81241826257853	0.3924360933802784	1				NaN	NaN	0	NaN	6416	4714	11128
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11138	34.119	NaN	3825.8	30	0	938.75	0.214	+			14562	GTFLEGVAK	9	47	461.25554990008237	920.4965468669648	2	461.2553405761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTFLEGVAK_	ENSG00000174886|ENST00000308961|NDUFA11;ENST00000593233.1_1_19:5894755-5901370:-|nuORF;nc|ENSG00000174886|Q86Y39-2|NDUFA11	93.1432384553994	0.056003526918089595	1				NaN	NaN	0	NaN	6419	4717	11137
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11139	34.122	NaN	2017.5	30	0	393.29	0.106			+	36145	SEKTILIR	8	49	480.2976819086002	958.5808108840005	2	480.29766845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEKTILIR_	REV__ENSG00000011454|ENST00000373647|RABGAP1;REV__nc|ENSG00000188394|Q9Y3P9-2|RABGAP1	54.776311868738084	0.5534952410049249	1				NaN	NaN	0	NaN	6420	4717	11137
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11140	34.124	NaN	4168.3	30	0	991.2	0.106			+	16716	HLEVEPERTK	10	70	619.3295857378146	1236.644618542429	2	619.32958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HLEVEPERTK_	REV__ENSG00000131379|ENST00000253697|C3orf20;REV__nc|nan|Q8ND61-2|C3orf20	38.753607047826485	0.5606299674732264	1				NaN	NaN	0	NaN	6421	4717	11137
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11141	34.126	NaN	1799.5	30	0	230.7	0.106				-1	MYVAITGKGKS	11	56	585.8118202381356	NaN	0	585.8121337890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_M(Oxidation (M))YVAITGKGKS_	tr|U7STA2|U7STA2_FUSNUTransposaseIS4-likedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01277PE=4SV=1	30.568863376406313	0.42918353898720446	1				NaN	NaN	0	NaN	6422	4717	11137
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11142	34.128	NaN	2800.3	30	0	346.77	0.036			+	31203	QGRKPAHMY	9	66	544.2757044838349	NaN	0	544.2557373046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QGRKPAHMY_	REV__ENSG00000030066|ENST00000378460|NUP160;REV__nc|ENSG00000030066|Q12769-3|NUP160;REV__nc|ENSG00000030066|Q12769|NUP160	33.51558372728122	0.30835390848773375	1				NaN	NaN	0	NaN	6423	4717	11137
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11147	34.142	NaN	3481.6	30	0	952.49	0.214			+	28897	NQKQRKPS	8	57	493.28208379125334	984.5496146493067	2	493.28155517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NQKQRKPS_	REV__ENST00000515403.5_2_5:175602049-175603287:-|nuORF	55.50420428727701	0.5462892107279674	1				NaN	NaN	0	NaN	6425	4720	11146
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11148	34.146	NaN	2324.6	30	0	472.04	0.106	+			32646	QYVTQINRL	9	60	567.8161480321314	1133.6177431310628	2	567.81689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QYVTQINRL_	ENSG00000124126|ENST00000371941|PREX1;nc|ENSG00000124126|Q8TCU6-2|PREX1;nc|ENSG00000124126|Q8TCU6-3|PREX1	32.81241826257853	0.4965981579233955	1				NaN	NaN	0	NaN	6426	4720	11146
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11149	34.148	NaN	790.11	30	0	103.74	0.032			+	47115	VLNASLGR	8	38	415.2478002225612	NaN	0	415.2479553222656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VLNASLGR_	REV__ENSG00000197181|ENST00000356766|PIWIL2;REV__nc|ENSG00000197181|Q8TC59-2|PIWIL2	25.450171626174864	1.7418937515398478	1				NaN	NaN	0	NaN	6427	4720	11146
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11156	34.164	NaN	2424.1	30	0	213.65	0.214			+	-1	LHDANGPIVM	10	69	541.7666223564315	1081.518691779663	2	541.7702026367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LHDANGPIVM(Oxidation (M))_	REV__nc|ENSG00000111305|Q2KHT4-4|GSG1;REV__nc|ENSG00000111305|Q2KHT4-7|GSG1;REV__nc|ENSG00000111305|Q2KHT4-8|GSG1	56.72105179125745	0.3956618550748046	1				NaN	NaN	0	NaN	6431	4723	11155
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11157	34.168	NaN	3287.9	30	0	672.06	0.106			+	35654	SCTDKTIQVAD	11	71	619.2885733334332	1236.5625937336663	2	619.2894287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SC(Carbamidomethyl (C))TDKTIQVAD_	REV__ENST00000318266.9_1_20:2903898-2936286:+|nuORF;REV__ENST00000380393.7_1_20:2903898-2945537:+|nuORF	47.95952297671804	0.44903247279694136	1				NaN	NaN	0	NaN	6432	4723	11155
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11158	34.17	NaN	1746.5	30	0	236.06	0.106	+			41056	SVIGLQMGTNK	11	59	574.31094243272	1146.60733193224	2	574.3117065429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVIGLQMGTNK_	ENSG00000117519|ENST00000370206|CNN3;nc|ENSG00000117519|Q15417-2|CNN3;nc|ENSG00000117519|Q15417-3|CNN3	56.295219882781154	0.35652538189487115	1				NaN	NaN	0	NaN	6433	4723	11155
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11159	34.172	NaN	2335.3	30	0	524.36	0.106	+			35664	SDALKVTFL	9	46	497.28460051633454	992.5546480994691	2	497.2847900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SDALKVTFL_	ENSG00000134590|ENST00000257013|RTL8C	32.81241826257853	0.4965981579233955	1				NaN	NaN	0	NaN	6434	4723	11155
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11160	34.173	NaN	2420.2	30	0	252.23	0.106			+	-1	RPQVEKLMA	9	60	544.2990868486248	NaN	0	544.2997436523438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_RPQVEKLM(Oxidation (M))A_	REV__ENSG00000100380|ENST00000216218|ST13;REV__nc|ENSG00000212789|Q8NFI4|ST13P5;REV__nc|ENSG00000232150|Q8IZP2|ST13P4;REV__ST13|p.G306Efs*50|1|0.18|ENSG00000100380|chr22:40827160-40827160|C/-|frameshift_variant	37.15910966729921	0.2899585034171616	1				NaN	NaN	0	NaN	6435	4723	11155
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11161	34.175	NaN	1671.5	30	0	395.78	0.034	+			27877	MTKHPAKR	8	55	484.7751788473251	NaN	0	484.77386474609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MTKHPAKR_	ENSG00000154229|ENST00000413366|PRKCA;PRKCA|p.E588Rfs*4|1|0.53|ENSG00000154229|chr17:66788883-66788883|G/-|frameshift_variant	49.44154591367651	1.7418937515398478	1				NaN	NaN	0	NaN	6436	4723	11155
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11173	34.201	NaN	4506.5	30	0	503.1	0.214	+			38770	SSLYIILKK	9	64	532.8394879455332	1063.6644229578662	2	532.839599609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSLYIILKK_	ENSG00000155561|ENST00000285968|NUP205	109.47833844074708	0.029530294723441826	1				NaN	NaN	0	NaN	6445	4726	11172
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11174	34.205	NaN	1053.4	30	0	107.93	0.106				-1	 	0	45	455.2486213889583	454.24134492235834	1	455.2480773925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	6446	4726	11172
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11175	34.207	NaN	2608.1	30	0	568.99	0.106			+	25960	LSILHLPLTF	10	59	577.3528345025377	1152.6911160718753	2	577.3533935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSILHLPLTF_	REV__ENST00000487839.1_1_6:31603737-31604442:+|nuORF	46.45678178249821	0.4896490706773647	1				NaN	NaN	0	NaN	6447	4726	11172
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11176	34.209	NaN	1576.4	30	0	248.96	0.106				-1	 	0	44	450.75039376055213	899.4862345879043	2	450.7499694824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	6448	4726	11172
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11177	34.21	NaN	1439	30	0	165.23	0.035	+			34791	RYLEGTSCI	9	54	521.254978823721	1040.4954047142419	2	521.255126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RYLEGTSCI_	ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1	37.81151784470057	0.4459294069877048	1				NaN	NaN	0	NaN	6449	4726	11172
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11182	34.225	NaN	2510.5	30	0	965.82	0.214			+	-1	VHMCHHKR	8	37	368.8480831226762	1103.5224199682286	3	368.84783935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_VHMC(Carbamidomethyl (C))HHKR_	REV__ENST00000554649.1_1_15:95578663-95578804:-|nuORF	30.503639358989545	0.7238069182250283	1				NaN	NaN	0	NaN	6451	4729	11181
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11183	34.228	NaN	1434.3	30	0	159.36	0.035			+	16682	HIRQHDVL	8	43	509.28295654297233	1016.5513601527447	2	509.2829284667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HIRQHDVL_	REV__ENSG00000185219|ENST00000396077|ZNF445;REV__ZNF445|p.K976Sfs*50|1|0.19|ENSG00000185219|chr3:44446744-44446744|T/-|frameshift_variant	31.954861631926434	0.7126016770032289	1				NaN	NaN	0	NaN	6452	4729	11181
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11188	34.243	NaN	5329.2	30	0	878.15	0.214	+			4190	ATFPLSVQK	9	62	495.78441976105313	989.5542865889063	2	495.78485107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATFPLSVQK_	ENSG00000110367|ENST00000534980|DDX6	89.02883481214508	0.06760336634167786	1				NaN	NaN	0	NaN	6454	4732	11187
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11189	34.247	NaN	4347.1	30	0	735.86	0.106	+			39640	STIEYVIQR	9	68	554.8029098654978	1107.5912667977955	2	554.8040161132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STIEYVIQR_	ENSG00000101310|ENST00000650089|SEC23B	127.46168284122857	0.016682644177004526	1				NaN	NaN	0	NaN	6455	4732	11187
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11190	34.249	NaN	1894.2	30	0	436.36	0.106	+			35507	SATVLTFLR	9	40	336.53414614500224	1006.5806090352067	3	336.5343322753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SATVLTFLR_	ENSG00000151726|ENST00000281455|ACSL1;nc|ENSG00000151726|P33121-2|ACSL1;nc|ENSG00000151726|P33121-3|ACSL1	24.20275056022122	0.577060078256802	1				NaN	NaN	0	NaN	6456	4732	11187
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11191	34.25	NaN	3044.4	30	0	504.13	0.106			+	51049	YLEHISWPLVR	11	77	706.8890665791693	NaN	0	706.8896484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YLEHISWPLVR_	REV__ENSG00000168016|ENST00000645898|TRANK1;REV__nc|ENSG00000168016|O15050|TRANK1;REV__TRANK1|p.F2073Lfs*13|1|0.1|ENSG00000168016|chr3:36833232-36833232|A/-|frameshift_variant	30.317721548370564	0.4303027717346894	1				NaN	NaN	0	NaN	6457	4732	11187
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11192	34.252	NaN	1585.3	30	0	123.62	0.106			+	10217	ETGRLICLY	9	54	534.2796017124093	NaN	0	534.2801513671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ETGRLICLY_	REV__ENSG00000163817|ENST00000358525|SLC6A20;REV__nc|ENSG00000163817|Q9NP91-2|SLC6A20	44.116797842482775	0.2472372736944149	1				NaN	NaN	0	NaN	6458	4732	11187
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11193	34.254	NaN	1213	30	0	175.32	0.035			+	42446	TALVMKRGF	9	60	511.79456951553937	NaN	0	511.794921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TALVMKRGF_	REV__ENST00000526679.1_1_11:36420290-36422672:+|nuORF	37.81151784470057	0.28666463014928195	1				NaN	NaN	0	NaN	6459	4732	11187
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11200	34.271	NaN	3202.2	30	0	382.68	0.214	+			872	AEHFLEQQM	9	58	566.7578119529728	1131.5010709727455	2	566.7579345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEHFLEQQM_	CCT3|p.A379Lfs*9|1|0.21|ENSG00000163468|chr1:156312061-156312061|C/-|frameshift_variant;CCT3|p.K197Nfs*23|1|0.17|ENSG00000163468|chr1:156320857-156320857|T/-|frameshift_variant;CCT3|p.L350Ffs*9|1|0.49|ENSG00000163468|chr1:156312146-156312147|-/A|frameshift_variant;ENSG00000163468|ENST00000295688|CCT3;nc|ENSG00000163468|P49368-2|CCT3	66.96192283764107	0.15557981141143568	1				NaN	NaN	0	NaN	6463	4735	11199
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11201	34.274	NaN	1099.4	30	0	221.3	0.106	+			14896	GTLSSYIVK	9	43	484.2761388131975	NaN	0	484.2765197753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTLSSYIVK_	ENSG00000082068|ENST00000265107|WDR70	28.081489160057373	0.33578952234132536	1				NaN	NaN	0	NaN	6464	4735	11199
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11202	34.276	NaN	1237	30	0	137.1	0.038			+	1324	AETERREDAL	10	47	595.2958279842184	1188.5771030352366	2	595.7973022460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AETERREDAL_	REV__ENST00000484453.1_1_2:74668972-74669041:-|nuORF	35.17822180527639	0.5925517082438457	1				NaN	NaN	0	NaN	6465	4735	11199
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11206	34.29	NaN	1938.9	30	0	199.24	0.214	+			45710	VAALGLPLLPA	11	66	517.8340886453177	1033.6536243574353	2	517.8338012695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VAALGLPLLPA_	ENST00000453527.6_1_8:11710880-11725540:-|nuORF;ENST00000534510.5_1_8:11710880-11725540:-|nuORF	41.42661286455405	0.5384226294179143	1				NaN	NaN	0	NaN	6466	4738	11205
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11207	34.294	NaN	2656	30	0	218.95	0.106			+	2048	AKTEVTRLVE	10	66	573.3298837362362	1144.6452145392723	2	573.32958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AKTEVTRLVE_	REV__ENSG00000068724|ENST00000319190|TTC7A;REV__ENST00000409825.5_1_2:47184044-47301059:+|nuORF;REV__ENST00000491786.5_1_2:47205894-47301059:+|nuORF;REV__nc|ENSG00000068724|Q9ULT0-4|TTC7A	53.08895987439943	0.42869529153390606	1				NaN	NaN	0	NaN	6467	4738	11205
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11208	34.296	NaN	1744.5	30	0	163.32	0.035	+			8273	EAIALAEKY	9	60	504.2744236707242	1006.5342944082485	2	504.274169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EAIALAEKY_	ENSG00000069974|ENST00000336787|RAB27A	56.72105179125745	0.24094814563026265	1				NaN	NaN	0	NaN	6468	4738	11205
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11218	34.329	NaN	5027.3	30	0	1356.9	0.215				-1	 	0	63	564.3368069071108	1126.6590608810216	2	564.3377075195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	6472	4744	11217
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11219	34.332	NaN	1055.7	30	0	121.7	0.031	+			46953	VKGAGLGV	8	46	350.7211340123923	699.4277150915847	2	350.72125244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VKGAGLGV_	ENST00000586972.1_1_17:40265669-40266402:-|nuORF	23.036711822280957	0.7814608874307191	1				NaN	NaN	0	NaN	6473	4744	11217
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11225	34.348	NaN	1456	30	0	205.47	0.214			+	17560	IEAAIIKN	8	46	436.26585524340055	870.5171575536011	2	436.26556396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IEAAIIKN_	REV__tr|U7SMT3|U7SMT3_FUSNUGlyceroluptakeoperonantiterminatorOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01812PE=4SV=1	85.35947970620816	0.2915182781752196	1				NaN	NaN	0	NaN	6476	4747	11224
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11226	34.352	NaN	2057.9	30	0	302.85	0.035			+	30292	PTKTGGFLLN	10	46	524.2953060127886	1046.5760590923771	2	524.296142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PTKTGGFLLN_	REV__nc|ENSG00000197446|P24903-2|CYP2F1	24.519189625965996	0.6795976720565101	1				NaN	NaN	0	NaN	6477	4747	11224
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11231	34.367	NaN	2419.3	30	0	267.85	0.144	+			13858	GQWKKGFVL	9	59	531.8085776313347	1061.6026023294694	2	531.8084106445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GQWKKGFVL_	ENSG00000142864|ENST00000361219|SERBP1;ENST00000484880.1_1_1:67885652-67890638:-|nuORF;nc|ENSG00000142864|Q8NC51-2|SERBP1;nc|ENSG00000142864|Q8NC51-4|SERBP1;nc|ENSG00000142864|Q8NC51|SERBP1	35.61828744233558	0.47037581924408073	1				NaN	NaN	0	NaN	6479	4750	11230
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11238	34.387	NaN	2252.1	30	0	236.08	0.214			+	17274	IAALIGHCAL	10	54	491.28286331340837	NaN	0	491.26116943359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IAALIGHCAL_	REV__ENST00000270815.4_1_1:36180255-36180492:-|nuORF	54.76467175910256	0.2754795324328683	1				NaN	NaN	0	NaN	6483	4753	11237
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11239	34.39	NaN	2458.9	30	0	99.192	0.106				-1	DRMWSCHWKWK	11	76	810.3686125270697	1618.7226721209393	2	810.8690185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_DRMWSC(Carbamidomethyl (C))HWKWK_	ADGRG6|p.F1083Lfs*9|1|0.32|ENSG00000112414|chr6:142420031-142420031|T/-|frameshift_variant;ADGRG6|p.N504Ifs*9|1|0.31|ENSG00000112414|chr6:142397694-142397694|A/-|frameshift_variant;ADGRG6|p.S1069Rfs*9|1|0.04|ENSG00000112414|chr6:142419991-142419992|-/GTCACATAAAA|frameshift_variant;ENSG00000112414|ENST00000367609|ADGRG6;ENST00000415128.6_1_6:142623466-142692070:+|nuORF;ENST00000545477.1_1_6:142630681-142703096:+|nuORF;nc|ENSG00000112414|Q86SQ4-2|ADGRG6;nc|ENSG00000112414|Q86SQ4-4|ADGRG6;nc|ENSG00000112414|Q86SQ4|ADGRG6	8.693696342081763	0.8297815791940972	1				NaN	NaN	0	NaN	6484	4753	11237
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11240	34.392	NaN	1070.4	30	0	268.08	0.033				-1	GLSVHVCL	8	37	442.7364811277474	883.4584093222949	2	442.7353210449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_GLSVHVC(Carbamidomethyl (C))L_	CSDC2|p.H140Tfs*125|1|0.25|ENSG00000172346|chr22:41574846-41574846|C/-|frameshift_variant	29.841539824830324	0.7289191502596711	1				NaN	NaN	0	NaN	6485	4753	11237
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11245	34.407	NaN	1399.9	30	0	168	0.214			+	17596	IEFGHASTMI	10	59	561.2670412998344	1120.5195296664688	2	561.2677001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_IEFGHASTM(Oxidation (M))I_	REV__nc|ENSG00000122882|O95905-2|ECD	42.396135135203025	0.5270658956260207	1				NaN	NaN	0	NaN	6487	4756	11244
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11246	34.41	NaN	2345.3	30	0	205.99	0.035	+			35831	SEDDVKMAL	9	62	504.2391798214722	1006.4638067097444	2	504.7403869628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEDDVKMAL_	ENSG00000169813|ENST00000682386|HNRNPF	82.24051045832904	0.08786059719216216	1				NaN	NaN	0	NaN	6488	4756	11244
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11259	34.447	NaN	9061.5	30	0	3709.7	0.214	+			49886	VYTSGVYHI	9	64	519.7663515870129	1037.5181502408257	2	519.766357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYTSGVYHI_	ENSG00000111077|ENST00000314250|TNS2;ENST00000549311.7_1_12:53443879-53456445:+|nuORF;nc|ENSG00000111077|Q63HR2-2|TNS2;nc|ENSG00000111077|Q63HR2-4|TNS2;nc|ENSG00000111077|Q63HR2-5|TNS2;nc|ENSG00000111077|Q63HR2-6|TNS2;TNS2|p.G362Rfs*43|1|0.33|ENSG00000111077|chr12:53058087-53058088|-/A|frameshift_variant;TNS2|p.K660Nfs*96|1|0.2|ENSG00000111077|chr12:53059615-53059615|G/-|frameshift_variant;TNS2|p.P495Rfs*25|2|0.33|ENSG00000111077|chr12:53059119-53059119|C/-|frameshift_variant	97.47269410471826	0.04379738608259218	1				NaN	NaN	0	NaN	6495	4762	11258
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11260	34.451	NaN	7774.8	30	0	1143.4	0.106	+			49533	VYANGQHLF	9	69	524.7643256537474	1047.5140983742947	2	524.7642822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYANGQHLF_	ENSG00000171747|ENST00000307751|LGALS4	152.6333611392302	0.006255334666816058	1				NaN	NaN	0	NaN	6496	4762	11258
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11261	34.453	NaN	1524.8	30	0	204.31	0.106	+			51592	YYPPGVVVY	9	56	528.7720982962994	1055.5296436593987	2	528.7713623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YYPPGVVVY_	ENSG00000182631|ENST00000330120|RXFP3;RXFP3|p.R459Afs*31|1|0.5|ENSG00000182631|chr5:33938109-33938109|G/-|frameshift_variant	39.021493756699265	0.43173687394350213	1				NaN	NaN	0	NaN	6497	4762	11258
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11262	34.455	NaN	1403.4	30	0	237.76	0.106			+	40164	STQRLPSL	8	40	451.2581549689855	900.501757004771	2	451.258056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STQRLPSL_	REV__ENST00000476304.5_1_7:100218482-100231271:-|nuORF	47.657333605630114	0.6087971902037268	1				NaN	NaN	0	NaN	6498	4762	11258
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11263	34.456	NaN	2078.6	30	0	579.99	0.034	+			15747	GVSLMTVPK	9	47	466.26731331039616	930.5200736875923	2	466.7679138183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GVSLMTVPK_	ENST00000284202.8_1_18:22006682-22007982:+|nuORF	85.16082228582465	0.07850854922700509	1				NaN	NaN	0	NaN	6499	4762	11258
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11270	34.473	NaN	1134.5	30	0	144.95	0.142	+			38900	SSPLANQSL	9	47	458.7405094489327	915.4664659646654	2	458.74005126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSPLANQSL_	ENSG00000141627|ENST00000675505|DYM;nc|ENSG00000141627|Q7RTS9-2|DYM;nc|ENSG00000141627|Q7RTS9|DYM	37.81151784470057	0.4459294069877048	1				NaN	NaN	0	NaN	6503	4765	11269
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11276	34.491	NaN	3665.9	30	0	263.92	0.214	+			47403	VPNKVIQCF	9	65	552.7965992301009	1103.5786455270018	2	552.7977294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_VPNKVIQC(Carbamidomethyl (C))F_	CLTC|p.A1374*|1|0.05|ENSG00000141367|chr17:59683464-59683465|-/TA|frameshift_variant;CLTC|p.D632Yfs*7|1|0.15|ENSG00000141367|chr17:59666589-59666590|-/TTACA|frameshift_variant;ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000141367|Q00610-2|CLTC	76.84663266511073	0.11118375776443899	1				NaN	NaN	0	NaN	6506	4768	11275
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11277	34.494	NaN	2131	30	0	279	0.106			+	17841	IFLMIGKTM	9	59	527.294852269353	1052.5751516055059	2	527.2947998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IFLMIGKTM_	REV__ENST00000302243.11_1_16:70406767-70406821:+|nuORF	53.351449002276354	0.2690372970092375	1				NaN	NaN	0	NaN	6507	4768	11275
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11278	34.496	NaN	1687.2	30	0	183.33	0.106	+			2656	AQMEGFLNR	9	56	533.2610159647207	1064.5074789962414	2	533.2603759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AQMEGFLNR_	ENSG00000115306|ENST00000356805|SPTBN1	107.00750918261382	0.032051501805654005	1				NaN	NaN	0	NaN	6508	4768	11275
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11279	34.498	NaN	2436.6	30	0	294	0.106	+			49924	VYVERAEVL	9	58	539.3003939198579	1076.5862349065158	2	539.3011474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VYVERAEVL_	ENSG00000089234|ENST00000419234|BRAP	44.377184641726394	0.36891676396732553	1				NaN	NaN	0	NaN	6509	4768	11275
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11280	34.5	NaN	1521.6	30	0	242.43	0.035			+	22486	KTNGAFAKY	9	45	500.2663875215039	998.5182221098078	2	500.2661437988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KTNGAFAKY_	REV__ENSG00000080224|ENST00000389672|EPHA6;REV__EPHA6|p.S388Y|1|0.19|ENSG00000080224|chr3:97226312-97226312|C/A|missense_variant;REV__nc|ENSG00000080224|Q9UF33|EPHA6	37.15910966729921	0.4535818937225704	1				NaN	NaN	0	NaN	6510	4768	11275
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11287	34.518	NaN	2047.5	30	0	332.8	0.214	+			50470	YAFEGTAGRF	10	50	559.7663794727061	1117.5182060122122	2	559.7676391601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YAFEGTAGRF_	ENSG00000163762|ENST00000296059|TM4SF18	47.657333605630114	0.47858658696240314	1				NaN	NaN	0	NaN	6514	4771	11286
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11288	34.521	NaN	1308.6	30	0	94.793	0.106			+	11342	FLEPSVHL	8	51	471.2579846692671	NaN	0	471.2574768066406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FLEPSVHL_	REV__ADGRL1|p.Q699Rfs*47|1|0.4|ENSG00000072071|chr19:14159159-14159159|G/-|frameshift_variant;REV__ENSG00000072071|ENST00000361434|ADGRL1;REV__ENST00000589616.1_1_19:14270562-14272319:-|nuORF;REV__nc|ENSG00000072071|O94910|ADGRL1	35.200714571348534	1.7418937515398478	1				NaN	NaN	0	NaN	6515	4771	11286
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11289	34.523	NaN	1363.7	30	0	188.08	0.106			+	-1	VCMFFIGLAF	10	49	602.796630859375	NaN	0	602.796630859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_VC(Carbamidomethyl (C))MFFIGLAF_	REV__ENSG00000260903|ENST00000562532|XKR7	26.79610172149135	0.4121907004225123	1				NaN	NaN	0	NaN	6516	4771	11286
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11290	34.525	NaN	2130.6	30	0	245.9	0.038			+	-1	QLHLQMPAMH	10	50	611.2961572088559	1220.5777614845117	2	611.2949829101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_QLHLQM(Oxidation (M))PAMH_	REV__RIMBP3|p.R993H|1|0.16|ENSG00000275793|chr22:18608457-18608457|C/T|missense_variant	29.14955571784316	0.6417842315402807	1				NaN	NaN	0	NaN	6517	4771	11286
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11300	34.549	NaN	3777.1	30	0	375.24	0.214	+			6394	AVVGAVVFQK	10	60	509.3083724493711	1016.6021919655423	2	509.30816650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVVGAVVFQK_	ENSG00000169223|ENST00000303127|LMAN2;ENST00000504071.1_1_5:176759089-176761465:-|nuORF;ENST00000515209.5_1_5:176759089-176761331:-|nuORF	111.64827973302667	0.04310463411224686	1				NaN	NaN	0	NaN	6524	4774	11299
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11301	34.552	NaN	1791.8	30	0	129.61	0.035	+			25773	LSALKQLLL	9	57	499.8338664984472	997.6531800636944	2	499.83355712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSALKQLLL_	ENSG00000095564|ENST00000265990|BTAF1;nc|ENSG00000095564|O14981-2|BTAF1	47.657333605630114	0.33044192980041115	1				NaN	NaN	0	NaN	6525	4774	11299
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11307	34.569	NaN	1075.1	30	0	207.9	0.214	+			4300	ATGIFQEAL	9	40	475.2536324367884	NaN	0	475.2538757324219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATGIFQEAL_	ENST00000481948.1_1_16:88104968-88110264:+|nuORF	42.396135135203025	0.2590952873412954	1				NaN	NaN	0	NaN	6528	4777	11306
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11308	34.572	NaN	624.71	30	0	108.41	0.106	+			47017	VLAAKVPG	8	31	377.7458985638221	NaN	0	377.74578857421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VLAAKVPG_	CHD8|p.D1870Rfs*3|1|0.3|ENSG00000100888|chr14:21394187-21394188|-/G|frameshift_variant;CHD8|p.I1108Nfs*7|1|0.24|ENSG00000100888|chr14:21403648-21403649|-/T|frameshift_variant;CHD8|p.I351Nfs*70|1|0.25|ENSG00000100888|chr14:21429127-21429128|-/T|frameshift_variant;CHD8|p.L1905Ffs*30|2|0.29|ENSG00000100888|chr14:21394082-21394082|G/-|frameshift_variant;CHD8|p.N2371Ifs*6|1|0.32|ENSG00000100888|chr14:21391017-21391017|T/-|frameshift_variant;CHD8|p.N2371Kfs*2|2|0.24|ENSG00000100888|chr14:21391016-21391017|-/T|frameshift_variant;CHD8|p.V1538*|1|0.4|ENSG00000100888|chr14:21400267-21400267|T/-|frameshift_variant;ENSG00000100888|ENST00000646647|CHD8	9.47055586587303	1.741893751539848	1				NaN	NaN	0	NaN	6529	4777	11306
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11309	34.574	NaN	1705.1	30	0	729.49	0.106			+	6520	AYDGNLHTIT	10	40	368.847900390625	NaN	0	368.847900390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AYDGNLHTIT_	REV__CDH4|p.R666H|1|0.12|ENSG00000179242|chr20:61928415-61928415|G/A|missense_variant	33.921630207806714	0.38879399011744475	1				NaN	NaN	0	NaN	6530	4777	11306
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11310	34.576	NaN	2184.1	30	0	221.4	0.038			+	13915	GRLKWQAPCPT	11	63	628.8319702148438	NaN	0	628.8319702148438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GRLKWQAPCPT_	REV__NDE1|p.M193Cfs*34|1|0.36|ENSG00000072864|chr16:15691192-15691192|C/-|frameshift_variant	42.86426827375447	0.36657022113551535	1				NaN	NaN	0	NaN	6531	4777	11306
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11316	34.591	NaN	2474.9	30	0	404.89	0.212			+	27062	MAEIDAWTTNE	11	50	640.7773292046949	NaN	0	640.7770385742188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MAEIDAWTTNE_	REV__ENSG00000188554|ENST00000590996|NBR1;REV__ENST00000592304.1_1_17:41323316-41327951:+|nuORF;REV__NBR1|p.G521Wfs*2|1|0.25|ENSG00000188554|chr17:43194383-43194384|-/T|frameshift_variant;REV__NBR1|p.L746Wfs*50|1|0.23|ENSG00000188554|chr17:43200372-43200372|C/-|frameshift_variant;REV__nc|ENSG00000188554|Q14596-2|NBR1	29.170058357718403	0.43541742044178583	1				NaN	NaN	0	NaN	6534	4780	11315
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11317	34.594	NaN	1676.8	30	0	290.44	0.106	+			26777	LVQQIIFF	8	33	336.5342697777917	NaN	0	336.5344543457031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LVQQIIFF_	ENSG00000137868|ENST00000395105|STRA6;ENST00000572785.1_1_15:74474685-74474796:-|nuORF;ENST00000574439.5_1_15:74472423-74490170:-|nuORF;nc|ENSG00000137868|Q9BX79-3|STRA6;nc|ENSG00000137868|Q9BX79-4|STRA6;nc|ENSG00000137868|Q9BX79-5|STRA6;nc|ENSG00000137868|Q9BX79-6|STRA6	25.450171626174864	1.7418937515398478	1				NaN	NaN	0	NaN	6535	4780	11315
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11318	34.596	NaN	3770	30	0	391	0.041			+	33588	RLLWSVQEERP	11	73	706.8890665791693	NaN	0	706.888916015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RLLWSVQEERP_	REV__ENST00000464192.1_1_3:107047282-107047681:-|nuORF	26.063383197487333	0.44926255568796863	1				NaN	NaN	0	NaN	6536	4780	11315
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11325	34.614	NaN	2934.7	30	0	401.75	0.214	+			29094	NTMQQFLQK	9	70	569.2888569048271	1136.563160876454	2	569.2896118164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NTMQQFLQK_	ENSG00000071859|ENST00000393600|FAM50A	82.24051045832904	0.08786059719216216	1				NaN	NaN	0	NaN	6540	4783	11324
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11326	34.618	NaN	3137.1	30	0	626.4	0.106			+	26198	LSRYRGLWT	9	70	576.3187059676842	1150.6228590021683	2	576.320068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSRYRGLWT_	REV__ENST00000258412.7_1_2:219139241-219139346:-|nuORF	45.97224482568171	0.3502073465782774	1				NaN	NaN	0	NaN	6541	4783	11324
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11327	34.62	NaN	2832.1	30	0	402.86	0.036	+			27711	MQGEGKFIF	9	56	528.7616577148438	NaN	0	528.7616577148438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MQGEGKFIF_	ENSG00000264522|ENST00000581312|OTUD7B;nc|ENSG00000264522|Q6GQQ9-2|OTUD7B	44.116797842482775	0.2472372736944149	1				NaN	NaN	0	NaN	6542	4783	11324
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11333	34.636	NaN	5153.8	30	0	514.43	0.214	+			12829	GENKMGQLGL	10	65	523.768375078406	1045.522197223612	2	523.7687377929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GENKMGQLGL_	ENSG00000179051|ENST00000375436|RCC2;ENST00000405832.2_1_6:56297536-56297638:-|nuORF;ENST00000526625.2_1_11:62139723-62139795:+|nuORF;RCC2|p.A423Qfs*56|1|0.13|ENSG00000179051|chr1:17413120-17413120|T/-|frameshift_variant	74.1650062923329	0.2432923583094885	1				NaN	NaN	0	NaN	6545	4786	11332
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11334	34.64	NaN	2070.3	30	0	271	0.106	+			12575	GEGVKLQVM	9	53	480.7619759687254	959.5093990042508	2	480.762451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEGVKLQVM_	ENSG00000065427|ENST00000302445|KARS1;ENST00000451871.1_1_13:42499863-42500601:+|nuORF;ENST00000566560.5_1_16:75668010-75682538:-|nuORF;nc|ENSG00000065427|Q15046-2|KARS1	64.20726635412375	0.17854274437659667	1				NaN	NaN	0	NaN	6546	4786	11332
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11335	34.641	NaN	1153.4	30	0	154.78	0.106			+	50147	WIVQGKGR	8	54	472.27638407574455	942.5382152182891	2	472.27618408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_WIVQGKGR_	REV__ENST00000515734.2_1_5:59783993-59785590:+|nuORF	31.954861631926434	0.7126016770032289	1				NaN	NaN	0	NaN	6547	4786	11332
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11336	34.643	NaN	602.45	30	0	56.054	0.106			+	10242	ETKIVIKVD	9	27	348.88116455078125	NaN	0	348.88116455078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ETKIVIKVD_	REV__ENSG00000181220|ENST00000458143|ZNF746;REV__nc|ENSG00000181220|Q6NUN9-2|ZNF746;REV__nc|ENSG00000181220|Q6NUN9-3|ZNF746;REV__nc|ENSG00000181220|Q6NUN9|ZNF746	23.52269567125451	0.3573684076213556	1				NaN	NaN	0	NaN	6548	4786	11332
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11337	34.645	NaN	1227	30	0	211.91	0.106				-1	TCVPSVLGRP	10	45	543.2918701171875	NaN	0	543.2918701171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_TC(Carbamidomethyl (C))VPSVLGRP_	ENSG00000168702|ENST00000389484|LRP1B;LRP1B|p.H4368Tfs*4|1|0.47|ENSG00000168702|chr2:140274465-140274465|C/-|frameshift_variant	35.61828744233558	0.3832230071539346	1				NaN	NaN	0	NaN	6549	4786	11332
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11338	34.647	NaN	1696.9	30	0	319.07	0.106			+	29249	NWWILYSRRS	10	44	690.8604324579205	NaN	0	690.860595703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NWWILYSRRS_	REV__ENST00000470690.5_1_17:39987086-39988698:-|nuORF	14.137123925751023	0.4201028297492154	1				NaN	NaN	0	NaN	6550	4786	11332
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11339	34.649	NaN	782.84	30	0	111.52	0.035	+			37880	SNVVKIILI	9	30	333.5582331083069	NaN	0	333.5588684082031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SNVVKIILI_	ENSG00000187701|ENST00000460972|OR2T27;nc|ENSG00000227152|P0C7T2|OR2T7	17.364965105453717	0.37820932774828947	1				NaN	NaN	0	NaN	6551	4786	11332
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11345	34.666	NaN	3155.6	30	0	591.69	0.214				-1	 	0	53	564.3368069071108	1126.6590608810216	2	564.3374633789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	6554	4789	11344
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11346	34.67	NaN	3616.4	30	0	576.99	0.106			+	9863	EQEQMFNDPVT	11	57	669.2880024574791	1336.5614519817582	2	669.2880249023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EQEQMFNDPVT_	REV__tr|U7SPU3|U7SPU3_FUSNUDUF3798domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01900PE=4SV=1	17.468008924990375	0.788697330333842	1				NaN	NaN	0	NaN	6555	4789	11344
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11347	34.672	NaN	2916.8	30	0	327.97	0.106			+	-1	ITVMTGKSH	9	64	495.25761047363494	988.5006680140699	2	495.2578430175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_ITVM(Oxidation (M))TGKSH_	REV__ENSG00000099810|ENST00000644715|MTAP;REV__ENST00000419385.5_1_9:21815486-21862010:+|nuORF;REV__nc|ENSG00000099810|Q13126-2|MTAP;REV__nc|ENSG00000099810|Q13126-3|MTAP;REV__nc|ENSG00000099810|Q13126-4|MTAP;REV__nc|ENSG00000099810|Q13126-5|MTAP;REV__nc|ENSG00000099810|Q13126-6|MTAP;REV__nc|ENSG00000099810|Q13126-7|MTAP	58.22992032128504	0.22837015374068087	1				NaN	NaN	0	NaN	6556	4789	11344
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11348	34.674	NaN	2248	30	0	300.87	0.035	+			9749	ENFQLQLI	8	51	502.77420774185026	1003.5338625505005	2	502.7749328613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ENFQLQLI_	ENSG00000156931|ENST00000625842|VPS8;ENST00000492449.5_1_3:184603882-184769810:+|nuORF;nc|ENSG00000156931|Q8N3P4-2|VPS8;nc|ENSG00000156931|Q8N3P4-3|VPS8	51.33545320467046	0.5859736979383976	1				NaN	NaN	0	NaN	6557	4789	11344
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11355	34.69	NaN	2884.2	30	0	437.8	0.214	+			14572	GTFSKLFGK	9	59	492.7791167073953	983.5436804815906	2	492.77886962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTFSKLFGK_	ENSG00000188112|ENST00000341865|C6orf132;nc|nan|Q5T0Z8-2|C6orf132;nc|nan|Q5T0Z8-4|C6orf132	41.42661286455405	0.403525789677298	1				NaN	NaN	0	NaN	6561	4792	11354
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11356	34.694	NaN	1729.8	30	0	214.02	0.106	+			28644	NLGMVLLGLK	10	57	529.3259887695312	NaN	0	529.3259887695312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NLGMVLLGLK_	ENSG00000181544|ENST00000650831|FANCB;FANCB|p.I419Lfs*7|1|0.08|ENSG00000181544|chrX:14853110-14853111|-/TATTTAAATTGGAATATTAG|frameshift_variant;FANCB|p.I419Tfs*9|1|0.08|ENSG00000181544|chrX:14853109-14853110|-/AG|frameshift_variant	26.69291269510374	0.4125295221340092	1				NaN	NaN	0	NaN	6562	4792	11354
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11357	34.696	NaN	1268.2	30	0	190.35	0.034	+			44036	TPPASDLLK	9	40	471.268901483282	940.523250033364	2	471.2684631347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TPPASDLLK_	tr|U7T0U6|U7T0U6_FUSNULargeribosomalsubunitproteinuL11OS=FusobacteriumnucleatumCTI-5OX=1316586GN=rplKPE=3SV=1	29.14955571784316	0.5308295550522326	1				NaN	NaN	0	NaN	6563	4792	11354
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11362	34.711	NaN	2036.2	30	0	206.04	0.214	+			14696	GTIGLALAR	9	44	436.2716344150032	870.5287158968064	2	436.2718505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTIGLALAR_	ENSG00000099899|ENST00000252136|TRMT2A;ENST00000487668.5_1_22:20100432-20101310:-|nuORF;ENST00000494820.5_1_22:20100432-20103278:-|nuORF;nc|ENSG00000099899|Q8IZ69-2|TRMT2A	101.60071028292904	0.0375685401170269	1				NaN	NaN	0	NaN	6565	4795	11361
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11363	34.715	NaN	1497.8	30	0	518.51	0.106			+	33210	RFFTISTL	8	39	328.8549412090095	983.5429942272285	3	328.8551025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RFFTISTL_	REV__ENSG00000130477|ENST00000519716|UNC13A;REV__ENSG00000137766|ENST00000260323|UNC13C;REV__ENSG00000198722|ENST00000635942|UNC13B;REV__ENST00000561210.1_1_15:54556427-54709226:+|nuORF;REV__nc|ENSG00000198722|O14795-2|UNC13B;REV__nc|ENSG00000198722|O14795|UNC13B;REV__UNC13C|p.D1718Rfs*8|1|0.19|ENSG00000137766|chr15:54500163-54500164|-/A|frameshift_variant;REV__UNC13C|p.P2056Qfs*10|1|0.33|ENSG00000137766|chr15:54622384-54622384|C/-|frameshift_variant;REV__UNC13C|p.W1592Gfs*7|1|0.85|ENSG00000137766|chr15:54393104-54393104|T/-|frameshift_variant	21.70233525837049	0.7917639344264583	1				NaN	NaN	0	NaN	6566	4795	11361
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11364	34.716	NaN	1550.7	30	0	183.14	0.036	+			12591	GEHIIAGAGEL	11	52	533.780165849623	NaN	0	533.7806396484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEHIIAGAGEL_	ENSG00000167658|ENST00000309311|EEF2	29.170058357718403	0.43541742044178583	1				NaN	NaN	0	NaN	6567	4795	11361
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11369	34.731	NaN	3379.3	30	0	439.23	0.143	+			17078	HRQDALWI	8	68	519.7768410951168	NaN	0	519.7780151367188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HRQDALWI_	ENSG00000135439|ENST00000547588|AGAP2;nc|ENSG00000135439|Q99490|AGAP2	30.503639358989545	1.7418937515398478	1				NaN	NaN	0	NaN	6569	4798	11368
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11375	34.75	NaN	7425.3	30	0	695.54	0.214	+			5710	AVFGVIGSQK	10	62	503.29020865032714	1004.5658643674543	2	503.2899169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVFGVIGSQK_	ENSG00000065183|ENST00000349139|WDR3;WDR3|p.A919Cfs*2|1|0.38|ENSG00000065183|chr1:117959363-117959364|-/T|frameshift_variant;WDR3|p.K204Sfs*12|1|0.29|ENSG00000065183|chr1:117939505-117939505|A/-|frameshift_variant;WDR3|p.T410Ifs*46|1|0.05|ENSG00000065183|chr1:117943526-117943527|-/TAAATGTT|frameshift_variant	67.49366992349736	0.29779660154124327	1				NaN	NaN	0	NaN	6572	4801	11374
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11376	34.754	NaN	3734.8	30	0	450.31	0.106	+			7193	DAHPTLVTY	9	58	508.7561428966017	1015.4977328600035	2	508.7558898925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DAHPTLVTY_	ENSG00000165819|ENST00000298717|METTL3;ENST00000396522.6_1_14:21967741-21972178:-|nuORF;ENST00000536201.5_1_14:21969853-21979446:-|nuORF	71.29570347882199	0.13518600952103718	1				NaN	NaN	0	NaN	6573	4801	11374
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11377	34.755	NaN	754.69	30	0	158.66	0.033			+	32300	QTPEQGLL	8	36	443.23626708984375	NaN	0	443.23626708984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QTPEQGLL_	REV__ENST00000265052.9_1_3:127408639-127408726:-|nuORF	24.20275056022122	1.7418937515398478	1				NaN	NaN	0	NaN	6574	4801	11374
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11382	34.77	NaN	1753.2	30	0	297.92	0.214	+			39532	STFSEIFKK	9	52	543.794967617918	1085.575382302636	2	543.7964477539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STFSEIFKK_	ENSG00000163931|ENST00000462138|TKT;ENST00000460343.5_1_3:53261754-53265639:-|nuORF;ENST00000461139.5_1_3:53259774-53265639:-|nuORF;ENST00000469678.1_1_3:53259917-53265542:-|nuORF;nc|ENSG00000163931|P29401-2|TKT	40.77816245573522	0.41113185337114944	1				NaN	NaN	0	NaN	6576	4804	11381
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11383	34.774	NaN	2577.3	30	0	327.88	0.106	+			6563	AYLDKSPQF	9	56	534.772042325911	1067.529531718622	2	534.7728271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AYLDKSPQF_	ENSG00000067248|ENST00000251636|DHX29;ENST00000504778.5_1_5:54552318-54579000:-|nuORF;ENST00000513447.1_1_5:54569247-54572159:-|nuORF	44.377184641726394	0.36891676396732553	1				NaN	NaN	0	NaN	6577	4804	11381
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11384	34.776	NaN	3143.4	30	0	431.83	0.036	+			36695	SGREIAFPIE	10	59	559.7956505444421	1117.576748155684	2	559.7969360351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SGREIAFPIE_	ENSG00000006740|ENST00000379672|ARHGAP44;nc|ENSG00000006740|Q17R89-2|ARHGAP44;nc|ENSG00000006740|Q17R89-3|ARHGAP44	25.57405402267927	0.6709832231498071	1				NaN	NaN	0	NaN	6578	4804	11381
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11391	34.794	NaN	3094.1	30	0	341.29	0.214	+			42110	SYLDRTEQL	9	63	562.7823877690212	1123.5502226048422	2	562.7828369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SYLDRTEQL_	ENSG00000065268|ENST00000585809|WDR18	77.31757898189308	0.1091473830098891	1				NaN	NaN	0	NaN	6582	4807	11390
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11392	34.798	NaN	2318.6	30	0	396.69	0.106	+			20443	KEVDIYTV	8	49	483.76032144007445	965.5060899469489	2	483.760498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEVDIYTV_	ENSG00000111218|ENST00000382622|PRMT8;ENSG00000126457|ENST00000454376|PRMT1;nc|ENSG00000111218|Q9NR22-2|PRMT8;nc|ENSG00000126457|Q99873-2|PRMT1;nc|ENSG00000126457|Q99873-3|PRMT1	56.72105179125745	0.5342425954139568	1				NaN	NaN	0	NaN	6583	4807	11390
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11393	34.8	NaN	2039.4	30	0	337.81	0.106				-1	SWPWQFRC	8	64	583.764202486826	NaN	0	583.7643432617188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SWPWQFRC(Carbamidomethyl (C))_	ENSG00000172890|ENST00000319023|NADSYN1;ENST00000530831.1_1_11:71208417-71209628:+|nuORF;ENST00000531236.1_1_11:71196518-71209628:+|nuORF;nc|ENSG00000172890|Q6IA69-2|NADSYN1	31.954861631926434	1.7418937515398478	1				NaN	NaN	0	NaN	6584	4807	11390
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11394	34.802	NaN	1666.3	30	0	129.54	0.106	+			10057	ESGALGIVVP	10	56	471.268901483282	940.523250033364	2	471.77001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ESGALGIVVP_	ENST00000314289.12_2_4:2515676-2516066:+|nuORF	37.15910966729921	0.575322462179216	1				NaN	NaN	0	NaN	6585	4807	11390
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11395	34.803	NaN	2439.4	30	0	247.71	0.043			+	51121	YMRTGYFYWYL	11	62	781.858642578125	NaN	0	781.858642578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YMRTGYFYWYL_	REV__CECR2|p.N841Tfs*59|2|0.35|ENSG00000099954|chr22:17542597-17542597|C/-|frameshift_variant;REV__ENSG00000099954|ENST00000262608|CECR2;REV__nc|ENSG00000099954|Q9BXF3-2|CECR2;REV__nc|ENSG00000099954|Q9BXF3|CECR2	14.137123925751023	0.456735970842152	1				NaN	NaN	0	NaN	6586	4807	11390
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11401	34.82	NaN	1184.1	30	0	296.67	0.214	+			8529	EAVDTGRVL	9	41	480.2611721002601	958.5077912673203	2	480.2615661621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EAVDTGRVL_	CSPG4|p.E1665Sfs*10|1|0.39|ENSG00000173546|chr15:75677845-75677845|G/-|frameshift_variant;ENSG00000173546|ENST00000308508|CSPG4	62.107414245175825	0.1960472003779324	1				NaN	NaN	0	NaN	6589	4810	11400
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11402	34.824	NaN	1843.7	30	0	208.84	0.106	+			17981	IHIHCTAKAAP	11	54	581.3130879495701	1160.6116229659401	2	581.3134155273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IHIHCTAKAAP_	ENSG00000101825|ENST00000217939|MXRA5;MXRA5|p.Q2683Kfs*44|1|0.34|ENSG00000101825|chrX:3310156-3310156|G/-|frameshift_variant	23.52269567125451	0.7430573033454468	1				NaN	NaN	0	NaN	6590	4810	11400
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11403	34.826	NaN	1218.7	30	0	222.43	0.036			+	-1	LSNFPMALF	9	43	528.265869140625	NaN	0	528.265869140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_LSNFPM(Oxidation (M))ALF_	REV__ENSG00000177854|ENST00000369982|TMEM187	25.450171626174864	0.34907449758287085	1				NaN	NaN	0	NaN	6591	4810	11400
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11408	34.841	NaN	2087	30	0	391.28	0.213			+	-1	TAGHLEFGEEC	11	60	625.2586669921875	NaN	0	625.2586669921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_TAGHLEFGEEC(Carbamidomethyl (C))_	REV__SELE|p.S470A|1|0.06|ENSG00000007908|chr1:169727799-169727799|A/C|missense_variant	30.317721548370564	0.4303027717346894	1				NaN	NaN	0	NaN	6593	4813	11407
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11409	34.844	NaN	665.45	30	0	82.085	0.033			+	30029	PPQPARPL	8	32	438.2585847565035	NaN	0	438.25823974609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PPQPARPL_	REV__ENSG00000137218|ENST00000373018|FRS3	26.79610172149135	1.7418937515398478	1				NaN	NaN	0	NaN	6594	4813	11407
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11415	34.861	NaN	1887.8	30	0	243.95	0.214	+			18344	IQEVVRELL	9	60	549.8292064058525	1097.6438598785048	2	549.8294067382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IQEVVRELL_	ENSG00000185269|ENST00000409678|NOTUM	67.49366992349736	0.1516260258713357	1				NaN	NaN	0	NaN	6597	4816	11414
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11416	34.865	NaN	1184.2	30	0	220.14	0.106	+			39842	STLLNPIPK	9	47	491.79977469410056	NaN	0	491.7997741699219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STLLNPIPK_	ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3;SCYL3|p.N511Ifs*68|1|0.35|ENSG00000000457|chr1:169854907-169854907|T/-|frameshift_variant	82.24051045832904	0.06370642293906256	1				NaN	NaN	0	NaN	6598	4816	11414
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11417	34.867	NaN	738.36	30	0	64.778	0.033	+			6728	CALALSALL	9	40	437.7569611628964	NaN	0	437.7563171386719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_CALALSALL_	ENSG00000128567|ENST00000378555|PODXL;nc|ENSG00000128567|O00592-2|PODXL;PODXL|p.M231*|1|0.13|ENSG00000128567|chr7:131510844-131510844|C/-|frameshift_variant	33.51558372728122	0.30835390848773375	1				NaN	NaN	0	NaN	6599	4816	11414
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11423	34.883	NaN	5743.6	30	0	689.42	0.214			+	24325	LFIEGKFY	8	67	508.77664099193896	1015.538729050678	2	508.7762451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LFIEGKFY_	REV__ENSG00000122378|ENST00000606162|PRXL2A;REV__nc|ENSG00000122378|Q9BRX8-2|PRXL2A	47.91560031466742	0.6071945918984287	1				NaN	NaN	0	NaN	6602	4819	11422
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11424	34.887	NaN	1870.4	30	0	244.51	0.106	+			11271	FISDGCRYL	9	53	537.2575765349108	1072.5006001366214	2	537.2579345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FISDGCRYL_	ENSG00000279804|ENST00000624297|PRAMEF18	51.33545320467046	0.2872990594074956	1				NaN	NaN	0	NaN	6603	4819	11422
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11425	34.889	NaN	3062.1	30	0	1304.1	0.036	+			45545	TYLEKAIKI	9	35	360.2216559076772	1077.6431383232316	3	360.221435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TYLEKAIKI_	ENSG00000187555|ENST00000344836|USP7;ENST00000565455.5_1_16:8987857-9023250:-|nuORF;nc|ENSG00000187555|Q93009-3|USP7;USP7|p.R1090H|1|0.23|ENSG00000187555|chr16:8894038-8894038|C/T|missense_variant	37.81151784470057	0.4459294069877048	1				NaN	NaN	0	NaN	6604	4819	11422
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11431	34.905	NaN	6664.8	30	0	693.39	0.214	+			12754	GELGNGNIKL	10	64	507.78251919912634	1013.5504854650527	2	507.7826843261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GELGNGNIKL_	ENSG00000132646|ENST00000379143|PCNA	118.74307786436346	0.029104951601466193	1				NaN	NaN	0	NaN	6607	4822	11430
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11432	34.909	NaN	2473.5	30	0	268.29	0.106	+			45546	TYLEKAIKI	9	58	539.8288909576811	1077.643228982162	2	539.829833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TYLEKAIKI_	ENSG00000187555|ENST00000344836|USP7;ENST00000565455.5_1_16:8987857-9023250:-|nuORF;nc|ENSG00000187555|Q93009-3|USP7;USP7|p.R1090H|1|0.23|ENSG00000187555|chr16:8894038-8894038|C/T|missense_variant	93.5975768576971	0.05472259948179787	1				NaN	NaN	0	NaN	6608	4822	11430
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11433	34.911	NaN	1595	30	0	268.56	0.106	+			40521	STYYGSFVTR	10	46	590.7852612388051	1179.5559695444101	2	590.7857666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STYYGSFVTR_	EIF3H|p.S183Pfs*5|1|0.05|ENSG00000147677|chr8:116657225-116657225|A/-|frameshift_variant;ENSG00000147677|ENST00000521861|EIF3H;ENST00000517974.1_1_8:117671049-117768052:-|nuORF;ENST00000518034.5_1_8:117671049-117768048:-|nuORF	91.26522074875469	0.12383023862516404	1				NaN	NaN	0	NaN	6609	4822	11430
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11434	34.913	NaN	1439.2	30	0	265.19	0.035	+			24401	LGACTHGGPVL	11	38	512.7673294049374	1023.5201058766748	2	512.7695922851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LGACTHGGPVL_	ENSG00000182578|ENST00000675795|CSF1R	34.172542307311794	0.6313490974540716	1				NaN	NaN	0	NaN	6610	4822	11430
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11439	34.928	NaN	1305.9	30	0	311.42	0.214				-1	TGKKKMLKS	9	36	346.2110774520951	1035.6114029564853	3	346.21136474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_TGKKKM(Oxidation (M))LKS_	ENST00000462417.1_1_3:77366333-77366669:-|nuORF	13.45404412870281	0.6112419832031293	1				NaN	NaN	0	NaN	6612	4825	11438
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11440	34.931	NaN	1596.2	30	0	186.7	0.034				-1	 	0	51	482.2844242038192	962.5542954744384	2	482.2847595214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	6613	4825	11438
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11444	34.946	NaN	1855.8	30	0	231.65	0.214	+			15286	GTVAGAAVLLK	11	55	500.31333945846455	998.6121259837291	2	500.3127136230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTVAGAAVLLK_	ENSG00000160439|ENST00000415061|RDH13;ENST00000589305.5_1_19:55562362-55574430:-|nuORF	96.0336014099291	0.0740748020614995	1				NaN	NaN	0	NaN	6614	4828	11443
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11445	34.95	NaN	2014.7	30	0	286.9	0.106	+			51418	YTTSLCLCIV	10	58	558.27808802671	1114.5416231202198	2	558.2786865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YTTSLCLCIV_	ENSG00000184634|ENST00000374080|MED12;ENST00000462984.1_1_X:70346235-70347318:+|nuORF;MED12|p.E1337Kfs*8|1|0.26|ENSG00000184634|chrX:71130173-71130173|G/-|frameshift_variant;nc|ENSG00000184634|Q93074-2|MED12;nc|ENSG00000184634|Q93074-3|MED12	37.15910966729921	0.575322462179216	1				NaN	NaN	0	NaN	6615	4828	11443
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11446	34.952	NaN	2357.1	30	0	327.69	0.106	+			11171	FGQLGREL	8	45	460.25331306676634	918.4920732003327	2	460.2527770996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FGQLGREL_	ENSG00000277150|ENST00000622749|F8A3	52.936696900407355	0.5717071646657654	1				NaN	NaN	0	NaN	6616	4828	11443
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11447	34.953	NaN	4078.2	30	0	453.38	0.106				-1	LKRRDCAVRTP	11	77	707.3906189666529	NaN	0	707.3890380859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))LKRRDC(Carbamidomethyl (C))AVRTP_	ENST00000537245.5_1_1:6535562-6556614:-|nuORF	16.71738777980365	0.456735970842152	1				NaN	NaN	0	NaN	6617	4828	11443
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11448	34.955	NaN	2250.4	30	0	271.08	0.037			+	27948	MVHSKLLFF	9	61	561.3118766161609	NaN	0	561.3120727539062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MVHSKLLFF_	REV__ENST00000256544.7_2_15:34434362-34434515:-|nuORF	25.57405402267927	0.3484490411150625	1				NaN	NaN	0	NaN	6618	4828	11443
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11455	34.974	NaN	1589.2	30	0	178.5	0.214				-1	TSNLLLIGM	9	56	489.27034789106426	976.5261428489285	2	489.2704772949219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_TSNLLLIGM(Oxidation (M))_	ENSG00000166135|ENST00000299163|HIF1AN;ENST00000478787.1_1_10:102296230-102304880:+|nuORF	40.5726180659479	0.4135428067754104	1				NaN	NaN	0	NaN	6622	4831	11454
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11456	34.977	NaN	1622.5	30	0	223.65	0.106	+			3325	ASLVYRLVS	9	39	336.5342697777917	NaN	0	336.5342712402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASLVYRLVS_	ENSG00000184226|ENST00000377865|PCDH9;nc|ENSG00000184226|Q9HC56-2|PCDH9;PCDH9|p.A818Cfs*77|1|0.16|ENSG00000184226|chr13:67225989-67225990|-/A|frameshift_variant;PCDH9|p.F303Cfs*4|1|0.33|ENSG00000184226|chr13:67227532-67227533|AA/-|frameshift_variant;PCDH9|p.F580Lfs*14|2|0.24|ENSG00000184226|chr13:67226701-67226701|A/-|frameshift_variant;PCDH9|p.L689Sfs*9|1|0.24|ENSG00000184226|chr13:67226376-67226376|G/-|frameshift_variant	27.882242232435846	0.3367954786602879	1				NaN	NaN	0	NaN	6623	4831	11454
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11457	34.979	NaN	3131.6	30	0	512.03	0.037	+			8480	EASKYIMQY	9	64	566.7704309068561	1131.526308880512	2	567.271728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EASKYIMQY_	ENSG00000176658|ENST00000318217|MYO1D	102.7733458925114	0.03637199559902695	1				NaN	NaN	0	NaN	6624	4831	11454
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11462	34.995	NaN	14848	30	0	926.22	0.214	+			26902	LYADVGGKQF	10	78	549.284701468796	1096.554850004392	2	549.2852783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LYADVGGKQF_	ENSG00000180879|ENST00000370086|SSR4;ENST00000460616.5_1_X:153061851-153063636:+|nuORF;ENST00000485612.5_1_X:153061851-153063885:+|nuORF	126.24258497203832	0.01851300475414303	1				NaN	NaN	0	NaN	6626	4834	11461
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11463	34.998	NaN	4306.7	30	0	433.71	0.106	+			6568	AYLEAHETF	9	64	540.7533034291937	1079.4920539251873	2	540.7536010742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AYLEAHETF_	ENSG00000111581|ENST00000229179|NUP107;nc|ENSG00000111581|P57740-2|NUP107;nc|ENSG00000111581|P57740-3|NUP107	73.97473282117947	0.12360187025703594	1				NaN	NaN	0	NaN	6627	4834	11461
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11464	35.001	NaN	2038	30	0	364.94	0.038			+	8887	EETAGLFLWR	10	63	611.314697265625	NaN	0	611.314697265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EETAGLFLWR_	REV__nc|ENSG00000143622|Q92963-3|RIT1	32.81241826257853	0.3924360933802784	1				NaN	NaN	0	NaN	6628	4834	11461
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11475	35.027	NaN	2105.2	30	0	288.37	0.214				-1	 	0	58	564.3368069071108	1126.6590608810216	2	564.33740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	6636	4837	11474
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11476	35.031	NaN	1786.4	30	0	199.82	0.106	+			2930	ASCTVILKY	9	51	527.7838702069654	1053.5531874807307	2	527.7837524414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_ASC(Carbamidomethyl (C))TVILKY_	ENST00000463441.5_1_7:150020319-150023055:+|nuORF;ENST00000493307.1_1_7:150020428-150023055:+|nuORF	47.657333605630114	0.33044192980041115	1				NaN	NaN	0	NaN	6637	4837	11474
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11477	35.033	NaN	1200.7	30	0	131.36	0.031			+	-1	CSECCEGEA	9	40	348.77275160210706	NaN	0	348.77294921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))SECC(Carbamidomethyl (C))EGEA_	REV__ADAM7|p.L594Yfs*29|2|0.18|ENSG00000069206|chr8:24493162-24493162|T/-|frameshift_variant;REV__ENSG00000069206|ENST00000175238|ADAM7	8.693696342081763	0.40727630907727536	1				NaN	NaN	0	NaN	6638	4837	11474
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11485	35.053	NaN	2155	30	0	159.54	0.214			+	36584	SFVVATKGSE	10	63	512.7673294049374	1023.5201058766748	2	513.26513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SFVVATKGSE_	REV__ENSG00000139287|ENST00000333850|TPH2;REV__nc|ENSG00000139287|Q8IWU9-2|TPH2;REV__TPH2|p.Y450Tfs*8|1|0.07|ENSG00000139287|chr12:72031567-72031567|C/-|frameshift_variant	72.2432373244024	0.2589930451692646	1				NaN	NaN	0	NaN	6643	4840	11484
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11486	35.057	NaN	1708.1	30	0	362.28	0.106	+			19778	KEAIETIVAA	10	47	522.8002749732723	1043.5859970133445	2	522.801025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEAIETIVAA_	ENSG00000087460|ENST00000371085|GNAS;ENST00000313949.11_1_20:57415898-57485881:+|nuORF;ENST00000371075.7_3_20:57415898-57485881:+|nuORF;ENST00000476196.5_1_20:57478538-57485881:+|nuORF;ENST00000477931.5_1_20:57464155-57485881:+|nuORF;ENST00000480975.5_1_20:57464272-57485881:+|nuORF;ENST00000487981.5_1_20:57478601-57484479:+|nuORF;ENST00000494081.5_1_20:57478601-57480533:+|nuORF;ENST00000496934.5_1_20:57473969-57485881:+|nuORF;nc|ENSG00000087460|P63092-2|GNAS;nc|ENSG00000087460|P63092-3|GNAS;nc|ENSG00000087460|P63092-4|GNAS;nc|ENSG00000087460|Q5JWF2-2|GNAS;nc|ENSG00000087460|Q5JWF2|GNAS	30.317721548370564	0.6322445173429027	1				NaN	NaN	0	NaN	6644	4840	11484
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11487	35.059	NaN	1762.9	30	0	153.65	0.034	+			19406	KAPEPLSSL	9	55	471.268901483282	940.523250033364	2	471.7711181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KAPEPLSSL_	ENSG00000088038|ENST00000221232|CNOT3	75.04331003522576	0.118981335847003	1				NaN	NaN	0	NaN	6645	4840	11484
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11494	35.077	NaN	2884.9	30	0	396.83	0.214	+			42391	TAISVIKNL	9	62	479.79985445505287	957.5851559769058	2	479.8000793457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAISVIKNL_	ENSG00000147251|ENST00000276202|DOCK11;ENST00000553480.1_1_14:45332201-45332396:-|nuORF	84.9155231211612	0.07920012719736333	1				NaN	NaN	0	NaN	6649	4843	11493
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11495	35.08	NaN	1790.9	30	0	141.95	0.106	+			19845	KEEFVEEIK	9	63	575.8033096563755	1149.592066379551	2	575.8034057617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEEFVEEIK_	ENSG00000015171|ENST00000381604|ZMYND11;nc|ENSG00000015171|Q15326-2|ZMYND11;nc|ENSG00000015171|Q15326-3|ZMYND11;nc|ENSG00000015171|Q15326-4|ZMYND11;nc|ENSG00000015171|Q15326-5|ZMYND11;nc|ENSG00000015171|Q15326-6|ZMYND11	65.46538089061403	0.16805504838372562	1				NaN	NaN	0	NaN	6650	4843	11493
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11496	35.082	NaN	2095.9	30	0	364.65	0.039				-1	PRCCLAQCIKG	11	45	653.313552568672	1304.6125522041439	2	653.3130493164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_PRC(Carbamidomethyl (C))CLAQC(Carbamidomethyl (C))IKG_	ENST00000379091.8_1_8:81397856-81397940:+|nuORF	19.1035232394073	0.7810393085260824	1				NaN	NaN	0	NaN	6651	4843	11493
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11505	35.104	NaN	1656.8	30	0	170.56	0.214	+			1065	AEKVEIATL	9	53	487.2817589428099	972.5489649524199	2	487.2816467285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEKVEIATL_	ENSG00000041357|ENST00000044462|PSMA4;nc|ENSG00000041357|P25789-2|PSMA4	78.26377905018397	0.10505600812668463	1				NaN	NaN	0	NaN	6657	4846	11504
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11506	35.107	NaN	1992.3	30	0	340.08	0.035				-1	GDWEVRPM	8	51	503.22735805530033	1004.4401631774007	2	503.2265930175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_GDWEVRPM(Oxidation (M))_	nc|ENSG00000172728|Q6P4F1-3|FUT10	31.954861631926434	0.7126016770032289	1				NaN	NaN	0	NaN	6658	4846	11504
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11520	35.158	NaN	3146.4	30	0	166.85	0.214	+			4534	ATLAAVLQR	9	59	471.79001344147196	941.5654739497439	2	471.7900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATLAAVLQR_	ENSG00000159399|ENST00000290573|HK2	85.16082228582465	0.07850854922700509	1				NaN	NaN	0	NaN	6663	4855	11519
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11521	35.161	NaN	1441.3	30	0	185.3	0.106	+			27793	MRWPVILM	8	50	531.2865073785983	1060.5584618239966	2	531.2863159179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_M(Oxidation (M))RWPVILM_	ENST00000373518.1_1_X:72347145-72347370:-|nuORF	46.76643321282427	0.6143254112625767	1				NaN	NaN	0	NaN	6664	4855	11519
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11522	35.163	NaN	2281.3	30	0	430.14	0.106			+	23750	LCAYGAASSAL	11	59	513.7498741221802	1025.4851953111604	2	513.750244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LCAYGAASSAL_	REV__ENSG00000167508|ENST00000301012|MVD;REV__ENST00000563785.5_1_16:88722464-88729488:-|nuORF;REV__ENST00000568709.5_1_16:88722865-88725108:-|nuORF	35.61828744233558	0.616184410043185	1				NaN	NaN	0	NaN	6665	4855	11519
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11523	35.165	NaN	1990.5	30	0	211.13	0.106	+			50616	YEAELRTTL	9	62	548.2884716668027	NaN	0	548.28857421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YEAELRTTL_	ENSG00000232629|ENST00000437316|HLA-DQB2;nc|ENSG00000232629|P05538-2|HLA-DQB2;nc|ENSG00000232629|P05538|HLA-DQB2	58.2462437865262	0.1567987007793744	1				NaN	NaN	0	NaN	6666	4855	11519
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11524	35.167	NaN	2512.4	30	0	608.61	0.035	+			29154	NVIHNLATY	9	60	522.7771179133128	1043.5396828934256	2	522.7781372070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NVIHNLATY_	ENSG00000123353|ENST00000243045|ORMDL2	49.44154591367651	0.3095138337212152	1				NaN	NaN	0	NaN	6667	4855	11519
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11530	35.183	NaN	1403	30	0	433.52	0.214	+			11345	FLEQRQFS	8	51	527.7686550688197	1053.5227572044394	2	527.7695922851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FLEQRQFS_	ENST00000354667.8_2_7:26240216-26240336:-|nuORF	44.116797842482775	0.6307669463330267	1				NaN	NaN	0	NaN	6670	4858	11529
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11531	35.187	NaN	1145.1	30	0	147.6	0.106			+	37470	SLKGNELIV	9	55	486.7894564220341	NaN	0	486.7891540527344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLKGNELIV_	REV__ENSG00000150093|ENST00000302278|ITGB1;REV__nc|ENSG00000150093|P05556-2|ITGB1;REV__nc|ENSG00000150093|P05556-3|ITGB1;REV__nc|ENSG00000150093|P05556-4|ITGB1;REV__nc|ENSG00000150093|P05556-5|ITGB1	35.61828744233558	0.29773779453147337	1				NaN	NaN	0	NaN	6671	4858	11529
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11532	35.189	NaN	2067.4	30	0	369.68	0.106				-1	LHASVYAL	8	54	458.2503658338167	914.4861787344335	2	458.7520751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LHASVYAL_	ENSG00000165699|ENST00000298552|TSC1;ENST00000493467.5_1_9:135785858-135804259:-|nuORF;nc|ENSG00000165699|Q92574-2|TSC1;TSC1|p.L203Cfs*7|1|0.29|ENSG00000165699|chr9:132921874-132921874|A/-|frameshift_variant;TSC1|p.L463*|1|0.4|ENSG00000165699|chr9:132906781-132906781|A/-|frameshift_variant;TSC1|p.L910Wfs*21|1|0.36|ENSG00000165699|chr9:132897507-132897507|A/-|frameshift_variant;TSC1|p.R190H|1|0.16|ENSG00000165699|chr9:132921913-132921913|C/T|missense_variant	26.79610172149135	0.7524337208463756	1				NaN	NaN	0	NaN	6672	4858	11529
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11533	35.19	NaN	1316.5	30	0	215.01	0.106				-1	QCWLPSGRA	9	48	537.7598876953125	NaN	0	537.7598876953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_QC(Carbamidomethyl (C))WLPSGRA_	ENST00000399767.5_1_22:18226574-18257190:-|nuORF	20.94693142431847	0.3660861156085067	1				NaN	NaN	0	NaN	6673	4858	11529
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11534	35.192	NaN	944.56	30	0	198.16	0.035	+			1508	AGAAKWTGLF	10	49	511.27496337890625	NaN	0	511.27496337890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AGAAKWTGLF_	ENST00000301831.8_1_3:42003522-42003567:-|nuORF	32.81241826257853	0.3924360933802784	1				NaN	NaN	0	NaN	6674	4858	11529
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11538	35.206	NaN	2271.7	30	0	388.38	0.143	+			24602	LGQQEPVVL	9	45	491.7816874781896	981.5488220231792	2	491.781494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LGQQEPVVL_	ENST00000569717.5_1_16:71512168-71512942:-|nuORF	32.81241826257853	0.4965981579233955	1				NaN	NaN	0	NaN	6675	4861	11537
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11547	35.23	NaN	2188.4	30	0	261.37	0.146			+	50296	WSKDGKLTTR	10	59	596.3275360127035	1190.640519092207	2	596.3289794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WSKDGKLTTR_	REV__ENSG00000147394|ENST00000695776|ZNF185;REV__nc|ENSG00000147394|O15231-3|ZNF185;REV__nc|ENSG00000147394|O15231-4|ZNF185;REV__nc|ENSG00000147394|O15231-6|ZNF185;REV__nc|ENSG00000147394|O15231-7|ZNF185;REV__nc|ENSG00000147394|O15231-8|ZNF185;REV__nc|ENSG00000147394|O15231|ZNF185	27.047317107675042	0.6589519614906109	1				NaN	NaN	0	NaN	6681	4864	11546
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11553	35.248	NaN	748.66	30	0	89.105	0.214				-1	NSSTWSLMPN	10	39	576.7532133710002	1151.4918738088004	2	576.7518310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_NSSTWSLM(Oxidation (M))PN_	ENST00000445935.5_2_21:47737957-47742843:-|nuORF	14.864876125193954	0.7409144161711139	1				NaN	NaN	0	NaN	6684	4867	11552
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11554	35.252	NaN	682.44	30	0	63.156	0.035	+			37657	SLQTTHPPL	9	38	497.27199592140875	992.5294389096175	2	497.2712097167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLQTTHPPL_	ENST00000375206.6_1_9:100053158-100139173:+|nuORF	20.94693142431847	0.6074874384046576	1				NaN	NaN	0	NaN	6685	4867	11552
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11563	35.284	NaN	1395.3	30	0	203.99	0.214				-1	 	0	43	379.20937473257584	756.4041965319517	2	379.2093200683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	6688	4873	11562
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11564	35.288	NaN	987.77	30	0	189.09	0.106	+			1693	AGTPRLVL	8	40	413.76064615385997	NaN	0	413.760986328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AGTPRLVL_	ENST00000245407.7_1_5:131726498-131729479:+|nuORF	29.14955571784316	1.7418937515398478	1				NaN	NaN	0	NaN	6689	4873	11562
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11565	35.29	NaN	2251.8	30	0	416.29	0.106	+			34872	RYTLQASTF	9	52	543.7826142353192	1085.5506755374383	2	543.7832641601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RYTLQASTF_	ENSG00000055130|ENST00000325222|CUL1	54.776311868738084	0.25715957988447635	1				NaN	NaN	0	NaN	6690	4873	11562
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11566	35.292	NaN	1584.7	30	0	145.43	0.041	+			23360	KYTYWKLILPP	11	62	711.4103393554688	NaN	0	711.4103393554688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KYTYWKLILPP_	ENST00000467753.1_1_6:127838847-127838898:-|nuORF	17.468008924990375	0.456735970842152	1				NaN	NaN	0	NaN	6691	4873	11562
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11572	35.308	NaN	1973.5	30	0	289.13	0.214	+			14380	GTAIIQLPSK	10	57	514.3110846331401	1026.6076163330802	2	514.3119506835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTAIIQLPSK_	ENSG00000112651|ENST00000388752|MRPL2;ENST00000485654.1_1_6:43022014-43023405:-|nuORF;MRPL2|p.M292*|1|0.49|ENSG00000112651|chr6:43054319-43054319|G/-|frameshift_variant;OBSL1-MRPL2|1|fusion	89.02883481214508	0.13663399911061233	1				NaN	NaN	0	NaN	6694	4876	11571
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11573	35.311	NaN	3019.9	30	0	487.86	0.106				-1	RCRWPRAAQVL	11	72	706.888633522122	1411.7627141110438	2	707.390869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_RC(Carbamidomethyl (C))RWPRAAQVL_	ENST00000258781.10_1_7:45115652-45115988:+|nuORF	19.996771675451527	0.7768568223548057	1				NaN	NaN	0	NaN	6695	4876	11571
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11574	35.313	NaN	1442.3	30	0	302.41	0.106	+			24945	LLAAGSHVI	9	42	440.7660915946923	879.5176302561846	2	440.76544189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LLAAGSHVI_	ENSG00000169188|ENST00000374987|APEX2	52.29916861842294	0.2778091507991977	1				NaN	NaN	0	NaN	6696	4876	11571
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11575	35.315	NaN	1958.8	30	0	211.65	0.036	+			16934	HPNGLQVMY	9	47	529.758127238396	1057.501701543592	2	529.7582397460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HPNGLQVMY_	ENSG00000135775|ENST00000366669|COG2;ENST00000494371.5_1_1:230807261-230814859:+|nuORF;nc|ENSG00000135775|Q14746-2|COG2	40.5726180659479	0.4135428067754104	1				NaN	NaN	0	NaN	6697	4876	11571
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11582	35.333	NaN	1754.9	30	0	252.23	0.214	+			1007	AEKLEALSV	9	56	480.2739885428496	958.5334241524993	2	480.273681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEKLEALSV_	ENSG00000099901|ENST00000430524|RANBP1;ENST00000435265.5_1_22:20114425-20114572:+|nuORF;ENST00000448394.2_1_22:20110177-20114572:+|nuORF;nc|ENSG00000099901|P43487-2|RANBP1;nc|ENSG00000099901|P43487|RANBP1	50.033510581677724	0.3025703251535696	1				NaN	NaN	0	NaN	6701	4879	11581
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11583	35.337	NaN	1596	30	0	266.73	0.106	+			21971	KSDRILYI	8	40	336.5342697777917	NaN	0	336.53436279296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KSDRILYI_	ENST00000441359.1_2_7:112757550-112758579:-|nuORF	21.70233525837049	1.7418937515398478	1				NaN	NaN	0	NaN	6702	4879	11581
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11584	35.339	NaN	930.64	30	0	126.35	0.035			+	11724	FSEERNLI	8	51	504.26147168305454	1006.5083904329091	2	504.2613525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FSEERNLI_	REV__ENST00000295497.11_1_2:175712216-175712252:-|nuORF	51.19269402634007	0.5868595481438337	1				NaN	NaN	0	NaN	6703	4879	11581
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11590	35.355	NaN	2398.7	30	0	233.79	0.214	+			44518	TSTLVAFLQ	9	57	490.2763450777441	978.5381372222882	2	490.2765197753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSTLVAFLQ_	DYNC2H1|p.F2761Lfs*20|1|0.09|ENSG00000187240|chr11:103203742-103203742|T/-|frameshift_variant;DYNC2H1|p.L4021Wfs*5|1|0.3|ENSG00000187240|chr11:103358262-103358262|T/-|frameshift_variant;DYNC2H1|p.P3966Hfs*44|1|0.22|ENSG00000187240|chr11:103321194-103321194|T/-|frameshift_variant;ENSG00000187240|ENST00000375735|DYNC2H1;nc|ENSG00000187240|Q8NCM8-2|DYNC2H1	42.396135135203025	0.392153681582562	1				NaN	NaN	0	NaN	6706	4882	11589
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11591	35.358	NaN	1265.6	30	0	288.4	0.036			+	13999	GSDVAWQNSQ	10	50	546.2441292284319	NaN	0	546.2442626953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSDVAWQNSQ_	REV__ENSG00000120539|ENST00000375940|MASTL;REV__MASTL|p.G432E|1|0.29|ENSG00000120539|chr10:27170254-27170254|G/A|missense_variant;REV__MASTL|p.I458Nfs*5|1|0.32|ENSG00000120539|chr10:27170324-27170325|-/A|frameshift_variant;REV__MASTL|p.N564Ifs*4|1|0.29|ENSG00000120539|chr10:27170646-27170646|A/-|frameshift_variant;REV__nc|ENSG00000120539|Q96GX5-2|MASTL;REV__nc|ENSG00000120539|Q96GX5-3|MASTL	35.15202426646627	0.38475398474706135	1				NaN	NaN	0	NaN	6707	4882	11589
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11596	35.373	NaN	1731	30	0	353.86	0.214			+	24794	LIKEIINAP	9	43	505.81630433372686	1009.6180557342537	2	505.8164978027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LIKEIINAP_	REV__tr|U7SEC4|U7SEC4_FUSNUElongationfactorTsOS=FusobacteriumnucleatumCTI-5OX=1316586GN=tsfPE=3SV=1	37.15910966729921	0.4535818937225704	1				NaN	NaN	0	NaN	6709	4885	11595
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11597	35.377	NaN	1880.5	30	0	146.35	0.035			+	30816	QEEFRKVL	8	63	524.7930667971618	1047.5715806611236	2	524.7932739257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QEEFRKVL_	REV__ENSG00000033030|ENST00000633063|ZCCHC8;REV__ENST00000536306.5_1_12:122967212-122983396:-|nuORF;REV__ENST00000536663.5_1_12:122967212-122975555:-|nuORF;REV__ENST00000540586.1_1_12:122967996-122984530:-|nuORF;REV__ENST00000543897.5_2_12:122967996-122983396:-|nuORF	101.21157088398209	0.2500103534009131	1				NaN	NaN	0	NaN	6710	4885	11595
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11602	35.391	NaN	1471.3	30	0	153.41	0.145				-1	 	0	52	564.3368069071108	1126.6590608810216	2	564.8395385742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	6712	4888	11601
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11617	35.446	NaN	2160.9	30	0	207.8	0.214	+			14178	GSQFFITTK	9	61	514.7723380964453	1027.5301232596905	2	514.7722778320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSQFFITTK_	ENSG00000114857|ENST00000232978|NKTR;ENSG00000138398|ENST00000260970|PPIG;nc|ENSG00000138398|Q13427-2|PPIG;NKTR|p.K429Nfs*37|1|0.2|ENSG00000114857|chr3:42636986-42636986|A/-|frameshift_variant;NKTR|p.N670Ifs*43|1|0.14|ENSG00000114857|chr3:42637707-42637707|A/-|frameshift_variant;NKTR|p.R859Kfs*9|1|0.28|ENSG00000114857|chr3:42638271-42638272|-/A|frameshift_variant;NKTR|p.S692Ffs*17|1|0.1|ENSG00000114857|chr3:42637779-42637791|CAAGGAGCAGATC/-|frameshift_variant;PPIG|p.N420Mfs*33|1|0.4|ENSG00000138398|chr2:169636512-169636512|A/-|frameshift_variant	79.48907831485694	0.09975780661107167	1				NaN	NaN	0	NaN	6718	4897	11616
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11618	35.45	NaN	1513.3	30	0	197.93	0.034				-1	 	0	54	479.78167033452	957.54878773584	2	479.78143310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	6719	4897	11616
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11622	35.464	NaN	2079.9	30	0	326.87	0.214				-1	 	0	43	357.2130006184763	356.2057241518763	1	357.2137451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	6720	4900	11621
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11623	35.468	NaN	2307.2	30	0	242.35	0.106			+	25153	LLSSGEVSIS	10	53	496.26871961147157	990.5228862897432	2	496.2688903808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LLSSGEVSIS_	REV__ENSG00000046651|ENST00000340096|OFD1;REV__ENST00000380567.5_2_X:13753187-13758224:+|nuORF;REV__ENST00000490265.5_1_X:13753187-13770868:+|nuORF;REV__nc|ENSG00000046651|O75665-2|OFD1;REV__nc|ENSG00000046651|O75665-3|OFD1;REV__OFD1|p.I117Sfs*28|1|0.59|ENSG00000046651|chrX:13738879-13738879|A/-|frameshift_variant	90.77665401227738	0.12662738171778068	1				NaN	NaN	0	NaN	6721	4900	11621
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11624	35.469	NaN	2064.1	30	0	251.48	0.037			+	-1	MKPTIVSSYC	10	48	593.2868794821909	1184.5592060311817	2	593.2875366210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_MKPTIVSSYC(Carbamidomethyl (C))_	REV__ENSG00000172199|ENST00000302270|OR8U1;REV__ENSG00000181518|ENST00000641687|OR8D4;REV__ENSG00000196119|ENST00000284287|OR8A1;REV__ENSG00000196341|ENST00000641015|OR8D1;REV__ENSG00000197125|ENST00000642064|OR8B8;REV__ENSG00000279116|ENST00000624618|OR8D2;REV__nc|ENSG00000196119|Q8NGG7|OR8A1;REV__OR8D2|p.N299Mfs*3|1|0.07|ENSG00000279116|chr11:124319302-124319302|T/-|frameshift_variant	26.69291269510374	0.6618461711292317	1				NaN	NaN	0	NaN	6722	4900	11621
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11628	35.484	NaN	2770.1	30	0	380.62	0.214	+			11225	FIDSKKNNL	9	63	539.7979874314594	1077.5814219297188	2	539.7985229492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FIDSKKNNL_	tr|U7SYR8|U7SYR8_FUSNUReplicationproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00909PE=4SV=1	37.81151784470057	0.4459294069877048	1				NaN	NaN	0	NaN	6723	4903	11627
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11629	35.487	NaN	1564.2	30	0	116.03	0.034			+	7639	DKLLERSL	8	50	487.287402312098	972.560251690996	2	487.2879333496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DKLLERSL_	REV__ENSG00000171126|ENST00000306078|KCNG3;REV__nc|ENSG00000171126|Q8TAE7-2|KCNG3	37.81151784470057	0.6698925118251505	1				NaN	NaN	0	NaN	6724	4903	11627
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11633	35.501	NaN	2462.1	30	0	297.44	0.214	+			27796	MSDTTFKAL	9	55	507.2521583792317	1012.4897638252634	2	507.25238037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MSDTTFKAL_	CAPZA1|p.R259H|1|0.31|ENSG00000116489|chr1:112670047-112670047|G/A|missense_variant;CAPZA2|p.R259C|1|0.25|ENSG00000198898|chr7:116917781-116917781|C/T|missense_variant;ENSG00000116489|ENST00000263168|CAPZA1;ENSG00000198898|ENST00000361183|CAPZA2;ENST00000426421.5_1_7:116544367-116557918:+|nuORF;ENST00000466066.1_1_1:113202257-113212751:+|nuORF;ENST00000565906.2_1_15:89532752-89533049:-|nuORF	88.17693792209575	0.07000514020414955	1				NaN	NaN	0	NaN	6725	4906	11632
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11634	35.505	NaN	2483.4	30	0	171.59	0.035	+			8553	EAVLPRTLT	9	61	500.295489028235	NaN	0	500.2954406738281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EAVLPRTLT_	ENST00000378119.8_1_6:24720856-24721054:-|nuORF	67.49366992349736	0.1173583512313808	1				NaN	NaN	0	NaN	6726	4906	11632
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11640	35.521	NaN	1905.2	30	0	325.23	0.214			+	33891	RRQWLFRH	8	55	599.8374568181067	1197.6603607030133	2	599.8367919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RRQWLFRH_	REV__sp|P16778|VGLI_HCMVAUL37immediateearlyglycoproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL37PE=1SV=2;REV__sp|Q6SW94|VGLI_HCMVMUL37immediateearlyglycoproteinOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL37PE=3SV=1	26.79610172149135	0.7524337208463756	1				NaN	NaN	0	NaN	6729	4909	11639
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11641	35.525	NaN	2030.2	30	0	321.93	0.036	+			9118	EGLCRWLVL	9	58	544.8007137335139	1087.5868745338278	2	544.8020629882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EGLCRWLVL_	ENST00000562945.2_1_16:34428496-34428757:-|nuORF	35.15202426646627	0.4747332964206883	1				NaN	NaN	0	NaN	6730	4909	11639
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11649	35.543	NaN	2796.7	30	0	256.88	0.144	+			28084	NAFEVAEKY	9	64	535.7614078941233	1069.5082628550465	2	535.76171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAFEVAEKY_	ENSG00000130402|ENST00000252699|ACTN4;ENST00000588618.5_1_19:39138385-39212431:+|nuORF	96.66504779109242	0.04607440320619715	1				NaN	NaN	0	NaN	6735	4912	11648
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11653	35.559	NaN	4864.7	30	0	1387.3	0.214	+			20374	KESTLHLVL	9	66	520.3109100306647	1038.6072671281293	2	520.3114624023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KESTLHLVL_	ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000392399.3_1_2:137087013-137087097:-|nuORF;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;UBB|p.D191Tfs*35|2|0.18|ENSG00000170315|chr17:16382471-16382471|C/-|frameshift_variant;UBB|p.D191Tfs*35|2|0.18|ENSG00000170315|chr17:16382471-16382471|C/-|frameshift_variant	72.87924865735499	0.12833875048249987	1				NaN	NaN	0	NaN	6736	4915	11652
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11654	35.563	NaN	2350.7	30	0	328.81	0.106	+			21648	KPVDPIVGY	9	58	494.27898203968186	986.5434111461637	2	494.27880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KPVDPIVGY_	COL12A1|p.F2273Lfs*20|1|0.26|ENSG00000111799|chr6:75124000-75124000|A/-|frameshift_variant;COL12A1|p.G2777Wfs*37|1|0.15|ENSG00000111799|chr6:75102684-75102685|-/G|frameshift_variant;COL12A1|p.G3027Wfs*19|1|0.1|ENSG00000111799|chr6:75087680-75087681|-/G|frameshift_variant;COL12A1|p.I210Nfs*4|1|0.18|ENSG00000111799|chr6:75189581-75189582|-/T|frameshift_variant;COL12A1|p.I57T|1|0.14|ENSG00000111799|chr6:75194851-75194851|A/G|missense_variant;COL12A1|p.L2085Hfs*4|1|0.22|ENSG00000111799|chr6:75128382-75128383|-/T|frameshift_variant;COL12A1|p.P2307Lfs*21|1|0.25|ENSG00000111799|chr6:75123356-75123356|G/-|frameshift_variant;COL12A1|p.R56I|1|0.31|ENSG00000111799|chr6:75194854-75194854|C/A|missense_variant;COL12A1|p.T1046Qfs*7|2|0.22|ENSG00000111799|chr6:75156372-75156372|G/-|frameshift_variant;ENSG00000111799|ENST00000322507|COL12A1;nc|ENSG00000111799|Q99715-4|COL12A1	56.72105179125745	0.24094814563026265	1				NaN	NaN	0	NaN	6737	4915	11652
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11655	35.565	NaN	962.72	30	0	167.87	0.033	+			25735	LRTAADVI	8	29	429.7557794099628	NaN	0	429.75579833984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LRTAADVI_	ENSG00000275183|ENST00000611161|LENG9;LENG9|p.P468Afs*7|1|0.47|ENSG00000275183|chr19:54462125-54462126|-/C|frameshift_variant;nc|ENSG00000275183|Q96B70|LENG9	31.954861631926434	1.7418937515398478	1				NaN	NaN	0	NaN	6738	4915	11652
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11660	35.579	NaN	1758.3	30	0	467.7	0.142	+			17012	HPTSGVIVL	9	43	461.77143046266485	921.5283079921297	2	461.7705993652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HPTSGVIVL_	ENSG00000083857|ENST00000441802|FAT1;FAT1|p.G2934Vfs*3|2|0.37|ENSG00000083857|chr4:186617787-186617787|T/-|frameshift_variant;FAT1|p.K1225Nfs*9|1|0.03|ENSG00000083857|chr4:186636885-186636885|G/-|frameshift_variant;FAT1|p.N3847Yfs*7|1|0.03|ENSG00000083857|chr4:186601370-186601371|-/TTATA|frameshift_variant;FAT1|p.P3228Lfs*42|1|0.27|ENSG00000083857|chr4:186611556-186611556|G/-|frameshift_variant;FAT1|p.P4313Lfs*36|1|0.34|ENSG00000083857|chr4:186596602-186596602|G/-|frameshift_variant;FAT1|p.Q2933Hfs*14|1|0.33|ENSG00000083857|chr4:186617787-186617788|-/G|frameshift_variant;FAT1|p.T1364Yfs*8|1|0.23|ENSG00000083857|chr4:186636118-186636119|-/A|frameshift_variant;FAT1|p.V1878Cfs*8|2|0.22|ENSG00000083857|chr4:186620955-186620956|-/G|frameshift_variant	33.51558372728122	0.4900267029546261	1				NaN	NaN	0	NaN	6740	4918	11659
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11676	35.634	NaN	1180.6	30	0	182.19	0.214	+			15499	GVAPFTIAR	9	44	466.27114177945145	930.5277306257029	2	466.2707824707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVAPFTIAR_	COL6A3|p.A2956Lfs*45|1|0.33|ENSG00000163359|chr2:237336234-237336234|C/-|frameshift_variant;COL6A3|p.A2957Lfs*44|1|0.33|ENSG00000163359|chr2:237336232-237336232|A/-|frameshift_variant;COL6A3|p.G1770Vfs*12|1|0.05|ENSG00000163359|chr2:237366878-237366879|-/TGGTGTAA|frameshift_variant;COL6A3|p.G2207Efs*35|1|0.22|ENSG00000163359|chr2:237354908-237354908|G/-|frameshift_variant;COL6A3|p.G3016Vfs*19|1|0.34|ENSG00000163359|chr2:237334810-237334810|G/-|frameshift_variant;COL6A3|p.P2319Qfs*12|1|0.06|ENSG00000163359|chr2:237348359-237348359|G/-|frameshift_variant;COL6A3|p.V1771Sfs*8|3|0.08|ENSG00000163359|chr2:237366876-237366876|C/-|frameshift_variant;ENSG00000163359|ENST00000295550|COL6A3;nc|ENSG00000163359|P12111-2|COL6A3;nc|ENSG00000163359|P12111-3|COL6A3;nc|ENSG00000163359|P12111-4|COL6A3;nc|ENSG00000163359|P12111-5|COL6A3	37.15910966729921	0.4535818937225704	1				NaN	NaN	0	NaN	6747	4927	11675
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11677	35.638	NaN	2294.8	30	0	257.01	0.106				-1	RLWSWVLHLGL	11	74	711.4069887474046	1420.7994245616092	2	711.909912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))RLWSWVLHLGL_	ENSG00000182752|ENST00000328252|PAPPA;PAPPA|p.L1144Dfs*7|1|0.39|ENSG00000182752|chr9:116334893-116334894|CT/-|frameshift_variant;PAPPA|p.L1488Qfs*6|1|0.82|ENSG00000182752|chr9:116362706-116362707|CT/-|frameshift_variant;PAPPA|p.T1006Nfs*4|1|0.27|ENSG00000182752|chr9:116302813-116302814|-/A|frameshift_variant	23.52269567125451	0.7430573033454468	1				NaN	NaN	0	NaN	6748	4927	11675
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11678	35.64	NaN	1387.7	30	0	354.44	0.034	+			48082	VSSVPPVKR	9	52	484.7976930413236	967.5808331494472	2	484.7977294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSSVPPVKR_	ENSG00000162669|ENST00000370425|HFM1;ENST00000462405.5_1_1:91728075-91813019:-|nuORF;HFM1|p.N1388Tfs*37|1|0.26|ENSG00000162669|chr1:91262316-91262316|T/-|frameshift_variant;HFM1|p.V1397Sfs*6|1|0.31|ENSG00000162669|chr1:91262290-91262291|-/T|frameshift_variant;nc|ENSG00000162669|A2PYH4-2|HFM1	21.9598887501803	0.5980208138527809	1				NaN	NaN	0	NaN	6749	4927	11675
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11685	35.656	NaN	2356.7	30	0	353.71	0.214			+	27881	MTLCLSYFS	9	61	532.7441457800664	NaN	0	532.2908325195312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MTLCLSYFS_	REV__ENSG00000082175|ENST00000325455|PGR;REV__nc|ENSG00000082175|P06401-2|PGR;REV__nc|ENSG00000082175|P06401-3|PGR;REV__nc|ENSG00000082175|P06401-4|PGR;REV__nc|ENSG00000082175|P06401-5|PGR	45.9519527083369	0.2345902329052062	1				NaN	NaN	0	NaN	6753	4930	11684
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11686	35.66	NaN	2250.3	30	0	192.27	0.106	+			41077	SVILPILKK	9	59	505.8522814607273	1009.6900099882546	2	505.8519592285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVILPILKK_	ENSG00000187231|ENST00000428443|SESTD1;ENST00000486468.1_1_2:180027226-180056568:-|nuORF;SESTD1|p.G438Vfs*20|2|0.26|ENSG00000187231|chr2:179121901-179121901|T/-|frameshift_variant;SESTD1|p.K13Nfs*2|1|0.47|ENSG00000187231|chr2:179191803-179191803|T/-|frameshift_variant	33.921630207806714	0.48623198279849766	1				NaN	NaN	0	NaN	6754	4930	11684
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11687	35.662	NaN	1144.9	30	0	128.77	0.106			+	27375	MKFQRNNL	8	54	525.7781372070312	NaN	0	525.7781372070312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MKFQRNNL_	REV__ZNF461|p.S208Tfs*62|1|0.18|ENSG00000197808|chr19:36639722-36639723|-/AAATGCAATGAGTG|frameshift_variant	25.450171626174864	1.7418937515398478	1				NaN	NaN	0	NaN	6755	4930	11684
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11688	35.663	NaN	2091.1	30	0	365.54	0.106			+	14743	GTKEKKIGF	9	42	336.5341403066631	1006.5805915201894	3	336.8685607910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTKEKKIGF_	REV__ENSG00000110844|ENST00000548825|PRPF40B;REV__nc|ENSG00000110844|Q6NWY9-2|PRPF40B;REV__nc|ENSG00000110844|Q6NWY9-3|PRPF40B;REV__nc|ENSG00000110844|Q6NWY9|PRPF40B	23.04248740728303	0.5879033540491928	1				NaN	NaN	0	NaN	6756	4930	11684
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11689	35.665	NaN	899.73	30	0	78.207	0.035				-1	 	0	52	488.8128224359975	975.611091938795	2	488.8139343261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	6757	4930	11684
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11694	35.68	NaN	2926.2	30	0	699.99	0.211			+	-1	SCLRPFHARLR	11	59	706.888633522122	1411.7627141110438	2	706.88916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SC(Carbamidomethyl (C))LRPFHARLR_	REV__ENST00000568900.5_1_16:28986322-28990816:+|nuORF	16.006774744331256	0.795539314609425	1				NaN	NaN	0	NaN	6759	4933	11693
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11695	35.683	NaN	2045.5	30	0	352.21	0.106			+	28820	NPLPKQPLT	9	32	336.5341403066631	1006.5805915201894	3	336.5340576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NPLPKQPLT_	REV__ENSG00000197603|ENST00000651892|CPLANE1;REV__ENST00000509849.5_1_5:37107706-37125531:-|nuORF;REV__nc|ENSG00000197603|Q9H799|CPLANE1	30.503639358989545	0.5181749237905803	1				NaN	NaN	0	NaN	6760	4933	11693
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11696	35.685	NaN	1255.7	30	0	287.04	0.034				-1	 	0	48	482.27000817701787	962.5254634208358	2	482.2705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	6761	4933	11693
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11701	35.7	NaN	3474	30	0	477.1	0.214				-1	SLCILTGFVM	10	66	550.2797036484694	1098.5448543637388	2	550.2803955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_SLCILTGFVM(Oxidation (M))_	ENSG00000182107|ENST00000555868|TMEM30B;ENST00000557163.1_1_14:61746812-61748042:-|nuORF	71.29570347882199	0.26673431503403816	1				NaN	NaN	0	NaN	6763	4936	11700
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11702	35.703	NaN	1204	30	0	111.78	0.036			+	9660	ELSQTHPQL	9	50	526.7734375	NaN	0	526.7734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ELSQTHPQL_	REV__ENST00000422370.2_1_19:45647868-45648611:+|nuORF	34.172542307311794	0.30503706118289736	1				NaN	NaN	0	NaN	6764	4936	11700
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11712	35.727	NaN	1167.4	30	0	149.91	0.143	+			49734	VYNPTPNSL	9	42	502.755917591605	1003.49728225001	2	502.7558898925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYNPTPNSL_	COL12A1|p.F2273Lfs*20|1|0.26|ENSG00000111799|chr6:75124000-75124000|A/-|frameshift_variant;COL12A1|p.G2777Wfs*37|1|0.15|ENSG00000111799|chr6:75102684-75102685|-/G|frameshift_variant;COL12A1|p.G3027Wfs*19|1|0.1|ENSG00000111799|chr6:75087680-75087681|-/G|frameshift_variant;COL12A1|p.L2085Hfs*4|1|0.22|ENSG00000111799|chr6:75128382-75128383|-/T|frameshift_variant;COL12A1|p.P2307Lfs*21|1|0.25|ENSG00000111799|chr6:75123356-75123356|G/-|frameshift_variant;ENSG00000111799|ENST00000322507|COL12A1;nc|ENSG00000111799|Q99715-2|COL12A1;nc|ENSG00000111799|Q99715-4|COL12A1	60.11826168202944	0.21262886028301267	1				NaN	NaN	0	NaN	6771	4939	11711
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11717	35.743	NaN	2971.5	30	0	980.31	0.214				-1	RDRMYRRYWIF	11	61	559.9546993706788	1676.842268712236	3	559.955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_RDRM(Oxidation (M))YRRYWIF_	BAZ1A|p.F1348Hfs*8|1|0.02|ENSG00000198604|chr14:34761959-34761960|-/CAAGTGA|frameshift_variant;BAZ1A|p.L1455*|1|0.27|ENSG00000198604|chr14:34758726-34758726|A/-|frameshift_variant;BAZ1A|p.R1409Kfs*11|1|0.36|ENSG00000198604|chr14:34761774-34761774|C/-|frameshift_variant;BAZ1A|p.S944Qfs*34|1|0.38|ENSG00000198604|chr14:34775922-34775922|A/-|frameshift_variant;ENSG00000198604|ENST00000360310|BAZ1A;nc|ENSG00000198604|Q9NRL2-2|BAZ1A	3.211326085083802	0.8683767028876275	1				NaN	NaN	0	NaN	6773	4942	11716
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11718	35.747	NaN	1724.7	30	0	200.35	0.106			+	-1	EIHERAVPME	10	58	613.7940063476562	NaN	0	613.7940063476562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_EIHERAVPM(Oxidation (M))E_	REV__ENSG00000171790|ENST00000302946|SLFNL1;REV__nc|ENSG00000171790|Q499Z3-2|SLFNL1;REV__nc|ENSG00000171790|Q499Z3-3|SLFNL1;REV__nc|ENSG00000171790|Q499Z3-4|SLFNL1;REV__SLFNL1|p.L318Sfs*3|1|0.08|ENSG00000171790|chr1:41017640-41017640|G/-|frameshift_variant;REV__SLFNL1|p.V85G|1|0.31|ENSG00000171790|chr1:41020407-41020407|A/C|missense_variant	22.579656572578934	0.4201028297492154	1				NaN	NaN	0	NaN	6774	4942	11716
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11719	35.749	NaN	2120.1	30	0	271.14	0.036	+			36019	SEIFHSQSF	9	70	541.2509246828483	1080.4872964324966	2	541.75341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEIFHSQSF_	ENSG00000186522|ENST00000397712|SEPTIN10;ENST00000517342.1_1_8:57389388-57389772:-|nuORF;nc|ENSG00000186522|Q9P0V9-2|SEPTIN10;nc|ENSG00000186522|Q9P0V9-3|SEPTIN10	56.43379154798735	0.2433427591689151	1				NaN	NaN	0	NaN	6775	4942	11716
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11726	35.767	NaN	2139.7	30	0	200.54	0.214	+			15852	GYFGNPQKF	9	53	529.2587122739412	1056.5028716146824	2	529.2600708007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GYFGNPQKF_	ENSG00000053747|ENST00000313654|LAMA3;LAMA3|p.E2016Rfs*13|1|0.27|ENSG00000053747|chr18:23901164-23901164|G/-|frameshift_variant;LAMA3|p.T2580Hfs*68|1|0.55|ENSG00000053747|chr18:23915376-23915376|A/-|frameshift_variant;nc|ENSG00000053747|Q16787-1|LAMA3;nc|ENSG00000053747|Q16787-3|LAMA3;nc|ENSG00000053747|Q16787-4|LAMA3	106.41520541750704	0.03265588207292361	1				NaN	NaN	0	NaN	6779	4945	11725
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11727	35.771	NaN	1212.5	30	0	168.35	0.036	+			27229	MEKVLAGETL	10	47	545.79541015625	NaN	0	545.79541015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MEKVLAGETL_	ENSG00000129351|ENST00000588657|ILF3;ENST00000587928.5_1_19:10781281-10792148:+|nuORF;nc|ENSG00000129351|Q12906-2|ILF3;nc|ENSG00000129351|Q12906-3|ILF3;nc|ENSG00000129351|Q12906-4|ILF3;nc|ENSG00000129351|Q12906-5|ILF3;nc|ENSG00000129351|Q12906-6|ILF3;nc|ENSG00000129351|Q12906|ILF3	48.601550744091256	0.31444367966696773	1				NaN	NaN	0	NaN	6780	4945	11725
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11731	35.785	NaN	2532.8	30	0	355.4	0.214			+	18844	IVAGTNLGLL	10	49	485.8000129082785	969.585472883357	2	485.8003845214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IVAGTNLGLL_	REV__SCPEP1|p.A25T|1|0.38|ENSG00000121064|chr17:56978232-56978232|G/A|missense_variant	64.20726635412375	0.3275756395432415	1				NaN	NaN	0	NaN	6781	4948	11730
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11732	35.788	NaN	1776.1	30	0	201.9	0.106	+			7921	DSFPYLRGL	9	56	534.2797461253407	1066.5449393174813	2	534.2798461914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DSFPYLRGL_	ENSG00000148468|ENST00000378116|FAM171A1	44.116797842482775	0.37197099687881774	1				NaN	NaN	0	NaN	6782	4948	11730
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11733	35.79	NaN	1747	30	0	183.84	0.106			+	-1	LLQHLKEY	8	53	543.3031950430867	NaN	0	543.3027954101562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LLQHLKEY_	REV__ENSG00000171206|ENST00000643721|TRIM8;REV__TRIM8|p.R233W|1|0.11|ENSG00000171206|chr10:102655110-102655110|C/T|missense_variant	44.116797842482775	1.7418937515398478	1				NaN	NaN	0	NaN	6783	4948	11730
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11734	35.792	NaN	2128.5	30	0	278.02	0.037	+			41409	SVMSTVEWNK	10	64	590.7870054269091	1179.5594579206181	2	590.7869262695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVMSTVEWNK_	BZW1|p.S325Rfs*19|1|0.04|ENSG00000082153|chr2:200819989-200819990|-/ACAATATAGAA|frameshift_variant;ENSG00000082153|ENST00000409600|BZW1;nc|ENSG00000082153|Q7L1Q6-3|BZW1;nc|ENSG00000082153|Q7L1Q6-4|BZW1	61.691277971877994	0.35045824941635534	1				NaN	NaN	0	NaN	6784	4948	11730
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11740	35.808	NaN	1121.4	30	0	105.51	0.14	+			12630	GEIIGVKV	8	40	407.7553317030509	813.4961104729018	2	407.7548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEIIGVKV_	ENSG00000180817|ENST00000373232|PPA1	51.33545320467046	0.5859736979383976	1				NaN	NaN	0	NaN	6787	4951	11739
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11745	35.825	NaN	824.19	30	0	154.13	0.214	+			3134	ASHLDYLVL	9	44	515.7816774077176	1029.548801882235	2	515.7808227539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASHLDYLVL_	ATM|p.C1838Vfs*8|1|0.42|ENSG00000149311|chr11:108304687-108304687|T/-|frameshift_variant;ATM|p.G1642Wfs*23|1|0.78|ENSG00000149311|chr11:108297299-108297300|-/T|frameshift_variant;ATM|p.G2425Vfs*15|1|0.33|ENSG00000149311|chr11:108329204-108329204|G/-|frameshift_variant;ATM|p.I1581Sfs*20|1|0.25|ENSG00000149311|chr11:108293437-108293437|A/-|frameshift_variant;ATM|p.K2303Rfs*7|2|0.24|ENSG00000149311|chr11:108326153-108326153|A/-|frameshift_variant;ATM|p.K2413Tfs*11|1|0.06|ENSG00000149311|chr11:108329168-108329169|-/CAACCAATTTAAATTAT|frameshift_variant;ATM|p.K2811Sfs*46|1|0.34|ENSG00000149311|chr11:108345750-108345750|A/-|frameshift_variant;ATM|p.L2231Wfs*4|1|0.52|ENSG00000149311|chr11:108325426-108325426|T/-|frameshift_variant;ATM|p.P1587Ffs*13|1|0.08|ENSG00000149311|chr11:108293459-108293462|ACCC/-|frameshift_variant;ATM|p.R1973Efs*17|1|0.26|ENSG00000149311|chr11:108310311-108310311|A/-|frameshift_variant;ATM|p.T1609*|1|0.23|ENSG00000149311|chr11:108294972-108294973|-/TG|frameshift_variant;ATM|p.V1446Cfs*2|1|0.25|ENSG00000149311|chr11:108289697-108289698|-/T|frameshift_variant;ENSG00000149311|ENST00000675843|ATM	25.450171626174864	0.5654022654467333	1				NaN	NaN	0	NaN	6789	4954	11744
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11746	35.829	NaN	2260	30	0	628	0.037	+			32634	QYTQALEKF	9	68	564.2897685289597	1126.5649841247193	2	564.290283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QYTQALEKF_	ASAP2|p.H548Qfs*57|1|0.14|ENSG00000151693|chr2:9374842-9374842|C/-|frameshift_variant;ASAP2|p.L787Afs*16|1|0.31|ENSG00000151693|chr2:9388513-9388514|-/C|frameshift_variant;ENSG00000151693|ENST00000281419|ASAP2;nc|ENSG00000151693|O43150-2|ASAP2	49.536043120802724	0.308405419312776	1				NaN	NaN	0	NaN	6790	4954	11744
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11751	35.843	NaN	2195.2	30	0	392.91	0.214			+	8003	DTIVEDLGAI	10	53	523.273999013491	1044.533445093782	2	523.2743530273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DTIVEDLGAI_	REV__ENST00000579735.1_1_18:1363209-1363299:-|nuORF	44.116797842482775	0.5112108506279902	1				NaN	NaN	0	NaN	6792	4957	11750
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11752	35.847	NaN	3064.2	30	0	656.13	0.106	+			49581	VYERELQTF	9	71	592.8010078068181	1183.5874626804361	2	592.800048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYERELQTF_	ENSG00000203791|ENST00000368836|EEF1AKMT2	59.93077597824379	0.21419174904018318	1				NaN	NaN	0	NaN	6793	4957	11750
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11753	35.849	NaN	759.86	30	0	89.693	0.034			+	8613	ECNLVVVK	8	38	452.2522398679434	902.4899268026868	2	452.2518310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ECNLVVVK_	REV__ENSG00000148843|ENST00000369797|PDCD11	38.80614096846853	0.6637206697844082	1				NaN	NaN	0	NaN	6794	4957	11750
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11758	35.863	NaN	2821	30	0	654.87	0.215			+	24271	LEVLPPTADE	10	57	542.2824131426571	1082.5502733521141	2	542.28271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LEVLPPTADE_	REV__ENST00000581862.5_1_18:70829151-70867947:-|nuORF	51.33545320467046	0.4446945571623749	1				NaN	NaN	0	NaN	6796	4960	11757
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11759	35.867	NaN	1522.5	30	0	271.61	0.106	+			47823	VSKPLLKIL	9	33	337.5706481933594	NaN	0	337.5706481933594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSKPLLKIL_	ENST00000261168.8_1_12:14654270-14654414:+|nuORF	19.996771675451527	0.3693019437812985	1				NaN	NaN	0	NaN	6797	4960	11757
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11760	35.869	NaN	644.78	30	0	228.08	0.03			+	11843	FTAGSTPPQL	10	22	340.1770150411685	NaN	0	340.1770935058594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FTAGSTPPQL_	REV__ENST00000263212.9_2_22:22274709-22275219:-|nuORF	16.71738777980365	0.4201028297492154	1				NaN	NaN	0	NaN	6798	4960	11757
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11765	35.883	NaN	1947.3	30	0	201.94	0.214	+			51324	YSLVSREL	8	55	483.76637958298494	965.5182062327699	2	483.7662658691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YSLVSREL_	ENSG00000119777|ENST00000238788|TMEM214	79.71258880314673	0.32596852995588826	1				NaN	NaN	0	NaN	6800	4963	11764
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11766	35.887	NaN	1313.6	30	0	81.071	0.034			+	-1	LISCLRGR	8	52	487.7798040955657	973.5450552579314	2	487.7793273925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LISC(Carbamidomethyl (C))LRGR_	REV__HERV1_I-int_dup2|chr3:34679996-34686397:+|1.0948245018220069|0.0565463038051543|4.28|448.0|240|1|anti-sense	47.91560031466742	0.6071945918984287	1				NaN	NaN	0	NaN	6801	4963	11764
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11770	35.901	NaN	2463.5	30	0	673.5	0.214	+			20375	KESTLHLVL	9	50	520.3109100306647	1038.6072671281293	2	520.3112182617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KESTLHLVL_	ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000392399.3_1_2:137087013-137087097:-|nuORF;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;UBB|p.D191Tfs*35|2|0.18|ENSG00000170315|chr17:16382471-16382471|C/-|frameshift_variant;UBB|p.D191Tfs*35|2|0.18|ENSG00000170315|chr17:16382471-16382471|C/-|frameshift_variant	47.657333605630114	0.33044192980041115	1				NaN	NaN	0	NaN	6802	4966	11769
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11771	35.905	NaN	1162.1	30	0	147.46	0.106	+			21649	KPVDPIVGY	9	50	494.27898203968186	986.5434111461637	2	494.2793273925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KPVDPIVGY_	COL12A1|p.F2273Lfs*20|1|0.26|ENSG00000111799|chr6:75124000-75124000|A/-|frameshift_variant;COL12A1|p.G2777Wfs*37|1|0.15|ENSG00000111799|chr6:75102684-75102685|-/G|frameshift_variant;COL12A1|p.G3027Wfs*19|1|0.1|ENSG00000111799|chr6:75087680-75087681|-/G|frameshift_variant;COL12A1|p.I210Nfs*4|1|0.18|ENSG00000111799|chr6:75189581-75189582|-/T|frameshift_variant;COL12A1|p.I57T|1|0.14|ENSG00000111799|chr6:75194851-75194851|A/G|missense_variant;COL12A1|p.L2085Hfs*4|1|0.22|ENSG00000111799|chr6:75128382-75128383|-/T|frameshift_variant;COL12A1|p.P2307Lfs*21|1|0.25|ENSG00000111799|chr6:75123356-75123356|G/-|frameshift_variant;COL12A1|p.R56I|1|0.31|ENSG00000111799|chr6:75194854-75194854|C/A|missense_variant;COL12A1|p.T1046Qfs*7|2|0.22|ENSG00000111799|chr6:75156372-75156372|G/-|frameshift_variant;ENSG00000111799|ENST00000322507|COL12A1;nc|ENSG00000111799|Q99715-4|COL12A1	47.657333605630114	0.33044192980041115	1				NaN	NaN	0	NaN	6803	4966	11769
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11772	35.907	NaN	2569.2	30	0	287.68	0.106			+	-1	TQSLKGECF	9	58	535.2534045284702	1068.4922561237404	2	535.2538452148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_TQSLKGEC(Carbamidomethyl (C))F_	REV__ZFP28|p.A199T|1|0.31|ENSG00000196867|chr19:56549029-56549029|G/A|missense_variant	47.657333605630114	0.33044192980041115	1				NaN	NaN	0	NaN	6804	4966	11769
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11773	35.909	NaN	1849.4	30	0	154.16	0.036	+			1506	AFYVSNRKD	9	55	550.2797036484694	1098.5448543637388	2	550.27978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AFYVSNRKD_	ENSG00000091039|ENST00000261183|OSBPL8;nc|ENSG00000091039|Q9BZF1-2|OSBPL8;nc|ENSG00000091039|Q9BZF1-3|OSBPL8;OSBPL8|p.F644Lfs*25|1|0.34|ENSG00000091039|chr12:76371570-76371570|A/-|frameshift_variant	31.529811441608018	0.5085848003137583	1				NaN	NaN	0	NaN	6805	4966	11769
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11777	35.923	NaN	1465.4	30	0	135.41	0.214	+			34455	RTYPELVL	8	59	495.7844934806478	989.5544340280957	2	495.7846374511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTYPELVL_	PCDHB5|p.K190T|1|0.24|ENSG00000113209|chr5:141136003-141136003|A/C|missense_variant	33.921630207806714	0.6974157769993694	1				NaN	NaN	0	NaN	6806	4969	11776
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11778	35.926	NaN	992.77	30	0	149.61	0.034			+	25644	LQTAINRL	8	50	464.78120037532926	927.5478478174585	2	464.7767028808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LQTAINRL_	REV__ENSG00000092148|ENST00000399332|HECTD1;REV__HECTD1|p.F2271Lfs*13|1|0.16|ENSG00000092148|chr14:31107059-31107059|A/-|frameshift_variant;REV__HECTD1|p.I2041Lfs*27|1|0.36|ENSG00000092148|chr14:31113133-31113133|T/-|frameshift_variant	49.44154591367651	0.597725784090933	1				NaN	NaN	0	NaN	6807	4969	11776
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11783	35.941	NaN	4783.1	30	0	768.64	0.214	+			117	AAFDGGFTVK	10	72	506.758425760515	1011.5022985878301	2	506.7586364746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAFDGGFTVK_	ENSG00000102910|ENST00000285737|LONP2;ENST00000564259.1_1_16:48382051-48395504:+|nuORF;nc|ENSG00000102910|Q86WA8-2|LONP2	51.52775601994872	0.4429225830406686	1				NaN	NaN	0	NaN	6809	4972	11782
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11784	35.945	NaN	3000.4	30	0	226.52	0.106	+			25611	LQNEPLPERL	10	71	604.8351241972109	1207.6556954612217	2	604.8349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LQNEPLPERL_	ENSG00000124214|ENST00000371856|STAU1;nc|ENSG00000124214|O95793-2|STAU1;nc|ENSG00000124214|O95793-3|STAU1	63.42647028704847	0.33467688528802414	1				NaN	NaN	0	NaN	6810	4972	11782
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11785	35.946	NaN	1078.3	30	0	177.68	0.037				-1	PTRSTTFGGC	10	35	361.83432445397966	1082.481143962139	3	361.8348083496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_PTRSTTFGGC(Carbamidomethyl (C))_	RASAL3|p.P120Lfs*89|1|0.48|ENSG00000105122|chr19:15461577-15461577|G/-|frameshift_variant	25.125986553469783	0.6746423231557295	1				NaN	NaN	0	NaN	6811	4972	11782
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11789	35.961	NaN	2968.3	30	0	296.28	0.214			+	17889	IGDKLINR	8	54	464.78120037532926	927.5478478174585	2	464.78143310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IGDKLINR_	REV__ENST00000216268.5_1_22:50276984-50277221:+|nuORF	96.19043198914106	0.25873003980794995	1				NaN	NaN	0	NaN	6812	4975	11788
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11790	35.964	NaN	1435	30	0	162.67	0.106			+	-1	NLKEYCYK	8	57	559.2718637163018	NaN	0	559.271728515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_NLKEYC(Carbamidomethyl (C))YK_	REV__ENSG00000008277|ENST00000413139|ADAM22;REV__nc|ENSG00000008277|Q9P0K1-2|ADAM22;REV__nc|ENSG00000008277|Q9P0K1-3|ADAM22;REV__nc|ENSG00000008277|Q9P0K1-4|ADAM22;REV__nc|ENSG00000008277|Q9P0K1-5|ADAM22;REV__nc|ENSG00000008277|Q9P0K1|ADAM22	38.80614096846853	1.7418937515398478	1				NaN	NaN	0	NaN	6813	4975	11788
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11791	35.966	NaN	1916.8	30	0	278.39	0.106				-1	FEECPPPSF	9	54	555.2324561211738	1108.4503593091474	2	555.7349853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_FEEC(Carbamidomethyl (C))PPPSF_	ENSG00000142512|ENST00000339313|SIGLEC10;ENST00000357375.4_1_19:51919519-51920835:-|nuORF;nc|ENSG00000142512|Q96LC7-2|SIGLEC10;SIGLEC10|p.S384Tfs*8|1|0.39|ENSG00000142512|chr19:51415360-51415361|-/TG|frameshift_variant	31.954861631926434	0.5046124803899898	1				NaN	NaN	0	NaN	6814	4975	11788
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11792	35.968	NaN	1765.5	30	0	275.03	0.106	+			48313	VTEVGLSAY	9	52	469.74463532579136	NaN	0	469.744873046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTEVGLSAY_	ENSG00000103994|ENST00000564754|ZNF106;nc|ENSG00000103994|Q9H2Y7|ZNF106;ZNF106|p.S482Pfs*33|1|0.22|ENSG00000103994|chr15:42450759-42450759|A/-|frameshift_variant	71.29570347882199	0.10120983364817086	1				NaN	NaN	0	NaN	6815	4975	11788
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11793	35.97	NaN	2181.9	30	0	254.65	0.106			+	-1	DFLRCSADD	9	61	549.729694337752	1097.444835742304	2	550.23291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_DFLRC(Carbamidomethyl (C))SADD_	REV__ENSG00000111664|ENST00000229264|GNB3	25.57405402267927	0.5642445186134241	1				NaN	NaN	0	NaN	6816	4975	11788
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11794	35.972	NaN	1375.6	30	0	576.59	0.034				-1	 	0	39	472.27515400443735	471.26787753783736	1	472.2744445800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	6817	4975	11788
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11798	35.985	NaN	2399	30	0	334.24	0.214			+	-1	VGCDMALVLM	10	54	542.2476997150685	1082.480846496937	2	542.2482299804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_VGCDM(Oxidation (M))ALVLM(Oxidation (M))_	REV__ENSG00000165140|ENST00000375326|FBP1;REV__FBP1|p.G294Efs*11|1|0.11|ENSG00000165140|chr9:94603517-94603517|C/-|frameshift_variant	53.351449002276354	0.42630798468005626	1				NaN	NaN	0	NaN	6818	4978	11797
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11799	35.989	NaN	2002.7	30	0	402.58	0.036			+	-1	CMCSPLRSN	9	52	555.2324561211738	1108.4503593091474	2	555.2320556640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))CMC(Carbamidomethyl (C))SPLRSN_	REV__ENST00000581216.5_2_17:29231349-29231442:-|nuORF	25.57405402267927	0.5642445186134241	1				NaN	NaN	0	NaN	6819	4978	11797
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11804	36.004	NaN	3656.4	30	0	235.22	0.214	+			38109	SPVSKGILQY	10	66	546.3081055727561	1090.601658212312	2	546.3089599609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SPVSKGILQY_	ENSG00000167325|ENST00000300738|RRM1	53.08895987439943	0.42869529153390606	1				NaN	NaN	0	NaN	6821	4981	11803
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11805	36.007	NaN	1953.5	30	0	171.71	0.106				-1	 	0	58	488.8128224359975	975.611091938795	2	488.812744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	6822	4981	11803
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11806	36.009	NaN	1321.4	30	0	128.5	0.106	+			10441	EVLKPLKVI	9	41	346.9018899866772	NaN	0	346.9021301269531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EVLKPLKVI_	ENST00000604062.6_2_X:53123411-53128703:+|nuORF	47.95952297671804	0.22075498469600283	1				NaN	NaN	0	NaN	6823	4981	11803
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11807	36.011	NaN	2387.8	30	0	232.78	0.037	+			45567	TYMGHTGAVW	10	67	561.7550522928603	1121.4955516525206	2	561.7554321289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TYMGHTGAVW_	ENSG00000084623|ENST00000677711|EIF3I;ENST00000474371.1_1_1:32688150-32694122:+|nuORF;ENST00000489353.5_1_1:32688042-32691823:+|nuORF	51.33545320467046	0.4446945571623749	1				NaN	NaN	0	NaN	6824	4981	11803
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11813	36.027	NaN	4673	30	0	796.64	0.214	+			14079	GSLFLQTPK	9	59	495.7844934806478	989.5544340280957	2	495.784423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSLFLQTPK_	ENSG00000111716|ENST00000350669|LDHB;ENST00000470280.1_1_12:21796836-21807485:-|nuORF	80.91624569148213	0.09358672614454815	1				NaN	NaN	0	NaN	6827	4984	11812
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11814	36.03	NaN	3050.6	30	0	694.73	0.041				-1	 	0	59	706.8885409187574	1411.7625289043146	2	706.8880004882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	6828	4984	11812
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11819	36.045	NaN	2709.6	30	0	486.81	0.214	+			49606	VYGSFASKL	9	56	486.2631960049451	970.5118390766902	2	486.2630615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYGSFASKL_	ENSG00000155096|ENST00000337198|AZIN1	82.7504851949679	0.08565546331141553	1				NaN	NaN	0	NaN	6830	4987	11818
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11820	36.048	NaN	1944	30	0	318.01	0.035			+	43472	TGPALHTIVV	10	36	336.5342314978001	1006.5808650936003	3	336.53399658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TGPALHTIVV_	REV__ENSG00000153048|ENST00000311052|CARHSP1	16.473147378115264	0.7327422906225664	1				NaN	NaN	0	NaN	6831	4987	11818
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11827	36.066	NaN	2187.8	30	0	837.66	0.214	+			47140	VLQFFSCL	8	44	478.7502843926719	955.4860158521439	2	478.7498474121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VLQFFSCL_	ENST00000483122.1_1_10:114209100-114209169:+|nuORF	33.51558372728122	0.7005509609380386	1				NaN	NaN	0	NaN	6835	4990	11826
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11828	36.07	NaN	4076.1	30	0	582.28	0.106			+	-1	KIMAFVIIVT	10	68	575.8503072929127	1149.6860616526253	2	575.8500366210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_KIM(Oxidation (M))AFVIIVT_	REV__ENSG00000178732|ENST00000692618|GP5	39.252832667884924	0.5560298534376815	1				NaN	NaN	0	NaN	6836	4990	11826
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11829	36.072	NaN	2264.2	30	0	310.12	0.033	+			49260	VVPEPGTSL	9	50	449.74726700654986	897.4799810798997	2	450.2484436035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVPEPGTSL_	ENSG00000092964|ENST00000521913|DPYSL2;nc|ENSG00000092964|Q16555-2|DPYSL2;nc|ENSG00000092964|Q16555|DPYSL2	55.50420428727701	0.2510918378945873	1				NaN	NaN	0	NaN	6837	4990	11826
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11837	36.092	NaN	3198.6	30	0	242.44	0.214	+			6589	AYLNKVELE	9	73	539.7924710012222	1077.5703890692444	2	539.792724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AYLNKVELE_	CON__P19013;ENSG00000170477|ENST00000551956|KRT4;ENST00000450021.1_1_2:183936291-183936849:-|nuORF	87.69643885390035	0.07135982304947239	1				NaN	NaN	0	NaN	6842	4993	11836
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11838	36.095	NaN	998.45	30	0	50.001	0.106			+	46670	VGGLHAVF	8	40	400.22666176971256	798.4387706062251	2	400.2265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VGGLHAVF_	REV__ENSG00000141314|ENST00000269051|RHBDL3;REV__nc|ENSG00000141314|P58872-2|RHBDL3;REV__nc|ENSG00000141314|P58872-3|RHBDL3	43.626045697637714	0.6338121648150432	1				NaN	NaN	0	NaN	6843	4993	11836
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11839	36.097	NaN	2853.2	30	0	579.89	0.106	+			36104	SEKKIFIGL	9	62	517.8158096901248	1033.6170664470494	2	517.8151245117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEKKIFIGL_	ENSG00000104960|ENST00000391842|PTOV1;nc|ENSG00000104960|Q86YD1-3|PTOV1	51.19269402634007	0.2889735674168909	1				NaN	NaN	0	NaN	6844	4993	11836
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11840	36.099	NaN	2177.5	30	0	193.33	0.106	+			47479	VQCPVFNIK	9	56	552.797708403645	1103.5808638740898	2	552.79736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_VQC(Carbamidomethyl (C))PVFNIK_	ENST00000310015.10_1_2:174820725-174820848:-|nuORF	60.97194046774394	0.20551255781574032	1				NaN	NaN	0	NaN	6845	4993	11836
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11841	36.101	NaN	2484.7	30	0	373.61	0.106	+			10639	EYPDRIMNTF	10	61	651.2948733291006	1300.575193725001	2	651.2948608398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_EYPDRIM(Oxidation (M))NTF_	ENSG00000137267|ENST00000333628|TUBB2A;ENSG00000137285|ENST00000259818|TUBB2B;ENSG00000188229|ENST00000340384|TUBB4B;ENSG00000196230|ENST00000327892|TUBB;ENSG00000258947|ENST00000315491|TUBB3;ENST00000518096.1_1_8:30209523-30210210:+|nuORF;ENST00000604929.1_1_9:140136931-140138005:+|nuORF;nc|ENSG00000258947|Q13509-2|TUBB3;TUBB2B|p.D177Hfs*21|1|0.32|ENSG00000137285|chr6:3225559-3225560|TC/-|frameshift_variant;TUBB2B|p.S168N|1|0.15|ENSG00000137285|chr6:3225586-3225586|C/T|missense_variant	49.536043120802724	0.461275219792494	1				NaN	NaN	0	NaN	6846	4993	11836
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11842	36.103	NaN	1632	30	0	268.79	0.106			+	8714	EEDVSVLGN	9	51	481.2275214611473	960.4404899890947	2	481.22833251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EEDVSVLGN_	REV__ENSG00000118496|ENST00000237281|FBXO30	49.44154591367651	0.3095138337212152	1				NaN	NaN	0	NaN	6847	4993	11836
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11843	36.104	NaN	1929.1	30	0	344.81	0.037			+	28952	NSDLHSQGVVI	11	52	584.8040161132812	NaN	0	584.8040161132812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NSDLHSQGVVI_	REV__ENSG00000168310|ENST00000393593|IRF2	35.17822180527639	0.40864158092774266	1				NaN	NaN	0	NaN	6848	4993	11836
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11850	36.122	NaN	9219.1	30	0	2064.9	0.214	+			14891	GTLSSWNLK	9	63	503.2735388276832	1004.5325247221664	2	503.27166748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTLSSWNLK_	ENST00000380319.2_1_X:15782817-15782931:+|nuORF;ENST00000380334.6_1_X:15706900-15721312:+|nuORF;ENST00000380336.5_1_X:15706900-15715389:+|nuORF;ENST00000435806.2_1_X:15706900-15713817:+|nuORF;nc|ENSG00000290746|Q8WTZ4|CA5BP1	132.757866228626	0.013877640931359021	1				NaN	NaN	0	NaN	6852	4996	11849
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11851	36.126	NaN	5038.4	30	0	547.59	0.106	+			3399	ASQELWLNH	9	67	549.2719202313143	1096.5292875294285	2	549.2725830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASQELWLNH_	ENSG00000105732|ENST00000359044|ZNF574;nc|ENSG00000105732|Q6ZN55-2|ZNF574	98.58198989935565	0.04066992115528678	1				NaN	NaN	0	NaN	6853	4996	11849
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11852	36.128	NaN	3397.5	30	0	684.58	0.034			+	30238	PSSVWLPQ	8	53	457.24248329030945	912.4704136474189	2	457.2419738769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PSSVWLPQ_	REV__ENST00000524486.5_1_11:802912-803251:-|nuORF	60.29395666154354	0.49887135096048313	1				NaN	NaN	0	NaN	6854	4996	11849
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11870	36.184	NaN	7472.7	30	0	1748.3	0.214	+			8231	EAEVDKLEL	9	59	523.273999013491	1044.533445093782	2	523.2744750976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EAEVDKLEL_	ENSG00000182628|ENST00000330137|SKA2;ENST00000580541.1_1_17:57232479-57232524:-|nuORF;SKA2|p.K91Nfs*13|1|0.07|ENSG00000182628|chr17:59119343-59119343|T/-|frameshift_variant	58.78195531508484	0.22376836668196862	1				NaN	NaN	0	NaN	6863	5005	11869
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11871	36.188	NaN	2307.7	30	0	165.57	0.106			+	27891	MTMELAAGLW	10	61	561.7691909115356	NaN	0	561.767822265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MTMELAAGLW_	REV__ENST00000394283.5_1_6:41700498-41700744:-|nuORF	53.351449002276354	0.2844141321977336	1				NaN	NaN	0	NaN	6864	5005	11869
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11872	36.19	NaN	1577.6	30	0	154.38	0.106	+			46197	VDYLKVKGL	9	60	517.8158096901248	1033.6170664470494	2	517.8167114257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VDYLKVKGL_	ENST00000560936.2_1_15:60688058-60688154:-|nuORF	35.61828744233558	0.47037581924408073	1				NaN	NaN	0	NaN	6865	5005	11869
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11873	36.192	NaN	1291.1	30	0	152.16	0.038	+			19369	KALEVRNKEN	10	49	600.8360595703125	NaN	0	600.8360595703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KALEVRNKEN_	ENSG00000172262|ENST00000682664|ZNF131;nc|ENSG00000172262|P52739-2|ZNF131;ZNF131|p.G387Efs*26|2|0.24|ENSG00000172262|chr5:43173415-43173415|A/-|frameshift_variant;ZNF131|p.R145Gfs*26|2|0.25|ENSG00000172262|chr5:43161304-43161304|A/-|frameshift_variant	27.047317107675042	0.41136583337917604	1				NaN	NaN	0	NaN	6866	5005	11869
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11877	36.206	NaN	4610.4	30	0	721.36	0.214	+			20457	KEVFLAQPV	9	65	515.8005410347439	1029.5865291362877	2	515.8009643554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEVFLAQPV_	ENST00000376007.8_1_6:31588511-31590634:+|nuORF	56.43379154798735	0.2433427591689151	1				NaN	NaN	0	NaN	6867	5008	11876
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11878	36.209	NaN	4341.8	30	0	620.47	0.036			+	29127	NTVTFSRSW	9	66	549.2719202313143	1096.5292875294285	2	549.2723999023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NTVTFSRSW_	REV__ENST00000430308.1_1_13:22105077-22105125:+|nuORF	49.536043120802724	0.308405419312776	1				NaN	NaN	0	NaN	6868	5008	11876
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11883	36.224	NaN	1259.3	30	0	188.58	0.144			+	-1	GNAEIMLVSI	10	50	531.778107167973	NaN	0	531.7784423828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_GNAEIM(Oxidation (M))LVSI_	REV__ENSG00000130385|ENST00000252677|BMP15	51.19269402634007	0.2980620950593832	1				NaN	NaN	0	NaN	6870	5011	11882
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11887	36.24	NaN	1522.1	30	0	132.99	0.144			+	45668	TYYPLHKF	8	57	534.777926196352	1067.541299459504	2	534.7782592773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TYYPLHKF_	REV__ENSG00000086570|ENST00000261800|FAT2;REV__FAT2|p.D4043Tfs*8|1|0.1|ENSG00000086570|chr5:151507544-151507544|C/-|frameshift_variant;REV__FAT2|p.P2377Qfs*41|1|0.34|ENSG00000086570|chr5:151543997-151543997|G/-|frameshift_variant;REV__FAT2|p.V3716Ffs*44|1|0.22|ENSG00000086570|chr5:151521447-151521447|C/-|frameshift_variant;REV__FAT2|p.Y3462Tfs*16|1|0.37|ENSG00000086570|chr5:151525891-151525891|G/-|frameshift_variant	25.450171626174864	0.7628259754767981	1				NaN	NaN	0	NaN	6871	5014	11886
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11891	36.256	NaN	1069.7	30	0	84.247	0.141			+	47478	VQCNAMHP	8	41	450.197172468499	898.379792003798	2	450.1968688964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VQCNAMHP_	REV__ENSG00000138131|ENST00000260702|LOXL4	35.200714571348534	0.6875396545722289	1				NaN	NaN	0	NaN	6872	5017	11890
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11900	36.29	NaN	2817.2	30	0	496.31	0.214	+			19080	IYIGGQEHF	9	65	532.2642789437488	1062.5140049542974	2	532.2647705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IYIGGQEHF_	ENSG00000158125|ENST00000379416|XDH;XDH|p.Q919Rfs*10|1|0.37|ENSG00000158125|chr2:31350104-31350104|C/-|frameshift_variant	53.351449002276354	0.2690372970092375	1				NaN	NaN	0	NaN	6875	5023	11899
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11901	36.294	NaN	1389	30	0	123.52	0.106	+			46185	VDWLTEKM	8	46	519.2520341625521	1036.4895153919042	2	519.7532348632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_VDWLTEKM(Oxidation (M))_	ENSG00000141543|ENST00000649764|EIF4A3;ENSG00000156976|ENST00000323963|EIF4A2;ENSG00000161960|ENST00000293831|EIF4A1;ENST00000429589.5_1_3:186502413-186505273:+|nuORF;ENST00000468362.5_1_3:186503755-186505556:+|nuORF;ENST00000475653.5_1_3:186502413-186505086:+|nuORF;ENST00000492144.5_1_3:186503809-186505672:+|nuORF;ENST00000497177.1_1_3:186504924-186505672:+|nuORF;ENST00000575978.1_1_17:78111144-78112096:-|nuORF;ENST00000578324.5_1_17:7477602-7481249:+|nuORF;ENST00000581544.5_1_17:7477924-7481249:+|nuORF;ENST00000581621.1_1_17:7476159-7481249:+|nuORF;nc|ENSG00000156976|Q14240-2|EIF4A2;nc|ENSG00000161960|P60842-2|EIF4A1	45.97224482568171	0.6192535143389125	1				NaN	NaN	0	NaN	6876	5023	11899
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11902	36.296	NaN	1651.6	30	0	195.46	0.035	+			24164	LELYKVVQ	8	50	496.2945615622953	990.5745701913906	2	496.2934265136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LELYKVVQ_	ENSG00000130985|ENST00000335972|UBA1;nc|ENSG00000130985|P22314-2|UBA1	45.9519527083369	0.6193794311207887	1				NaN	NaN	0	NaN	6877	5023	11899
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11907	36.31	NaN	2027.3	30	0	145.97	0.214	+			45539	TYKVISNEF	9	67	550.7844078021933	1099.5542626711865	2	550.7847900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TYKVISNEF_	ENSG00000114062|ENST00000648336|UBE3A;ENST00000429033.1_1_21:32434669-32435362:-|nuORF;nc|ENSG00000114062|Q05086-2|UBE3A;nc|ENSG00000114062|Q05086|UBE3A	55.08391021199286	0.2545954270840753	1				NaN	NaN	0	NaN	6879	5026	11906
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11908	36.314	NaN	2449	30	0	337.36	0.034	+			4584	ATLGALLQK	9	53	457.7871272207003	913.5597015082006	2	457.78729248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATLGALLQK_	ENSG00000144426|ENST00000683969|NBEAL1;NBEAL1|p.A1274Qfs*17|1|0.1|ENSG00000144426|chr2:203135766-203135766|A/-|frameshift_variant;NBEAL1|p.F1670Lfs*25|1|0.21|ENSG00000144426|chr2:203144843-203144843|T/-|frameshift_variant;NBEAL1|p.F2315Lfs*2|1|0.17|ENSG00000144426|chr2:203193900-203193900|T/-|frameshift_variant;NBEAL1|p.K2562Rfs*15|1|0.41|ENSG00000144426|chr2:203209306-203209306|A/-|frameshift_variant;NBEAL1|p.N2072Kfs*10|1|0.35|ENSG00000144426|chr2:203172825-203172826|-/A|frameshift_variant;NBEAL1|p.T1311Nfs*3|1|0.08|ENSG00000144426|chr2:203135875-203135876|-/A|frameshift_variant;nc|ENSG00000144426|Q6ZS30-1|NBEAL1;nc|ENSG00000144426|Q6ZS30|NBEAL1	76.7741389293348	0.11149722112137898	1				NaN	NaN	0	NaN	6880	5026	11906
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11917	36.347	NaN	4005.6	30	0	608.88	0.143				-1	 	0	71	488.8128224359975	975.611091938795	2	488.8132019042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	6883	5032	11916
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11922	36.363	NaN	1601.4	30	0	231.46	0.215	+			28131	NAIVIHEVY	9	51	529.287032327974	1056.5595117227479	2	529.2877197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAIVIHEVY_	ENSG00000132849|ENST00000642238|PATJ;ENST00000484562.5_1_1:62228564-62579919:+|nuORF;nc|ENSG00000132849|Q8NI35-2|PATJ;nc|ENSG00000132849|Q8NI35-3|PATJ;nc|ENSG00000132849|Q8NI35-5|PATJ;nc|ENSG00000132849|Q8NI35|PATJ	45.97224482568171	0.3502073465782774	1				NaN	NaN	0	NaN	6885	5035	11921
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11923	36.367	NaN	727	30	0	157.39	0.106			+	21597	KPKATEEPK	9	26	343.19762858681145	NaN	0	343.1976013183594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KPKATEEPK_	REV__ENSG00000116690|ENST00000445192|PRG4;REV__nc|ENSG00000116690|Q92954-2|PRG4;REV__nc|ENSG00000116690|Q92954-3|PRG4;REV__nc|ENSG00000116690|Q92954-4|PRG4;REV__nc|ENSG00000116690|Q92954-5|PRG4;REV__nc|ENSG00000116690|Q92954-6|PRG4;REV__PRG4|p.K1030Nfs*14|1|0.16|ENSG00000116690|chr1:186308804-186308804|A/-|frameshift_variant	20.94693142431847	0.3660861156085067	1				NaN	NaN	0	NaN	6886	5035	11921
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11924	36.369	NaN	2123.3	30	0	361.91	0.106				-1	MLTNNTIGAIA	11	62	567.7928725067767	1133.5711920803533	2	568.293212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))LTNNTIGAIA_	tr|U7T3E2|U7T3E2_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00397PE=4SV=1	32.75053402867276	0.6462648045997152	1				NaN	NaN	0	NaN	6887	5035	11921
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11925	36.37	NaN	2112	30	0	268.44	0.038				-1	LMHLRNHSGE	10	52	605.2938639254279	NaN	0	605.2945556640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_LM(Oxidation (M))HLRNHSGE_	ENSG00000186448|ENST00000344387|ZNF197	24.20275056022122	0.4201028297492154	1				NaN	NaN	0	NaN	6888	5035	11921
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11930	36.385	NaN	4527.3	30	0	1146.7	0.211				-1	 	0	69	706.8885409187574	1411.7625289043146	2	706.8883666992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	6890	5038	11929
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11931	36.389	NaN	1877.5	30	0	333.25	0.106			+	1923	AISAHVVPIT	10	39	336.5342314978001	1006.5808650936003	3	336.53448486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AISAHVVPIT_	REV__ENSG00000242372|ENST00000374450|EIF6	16.473147378115264	0.7327422906225664	1				NaN	NaN	0	NaN	6891	5038	11929
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11932	36.39	NaN	2475.7	30	0	252.3	0.106	+			1143	AEMELQAKL	9	61	516.7730938624683	1031.5316347917365	2	516.772705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEMELQAKL_	ENSG00000177426|ENST00000343820|TGIF1;nc|ENSG00000177426|Q15583-3|TGIF1;nc|ENSG00000177426|Q15583-4|TGIF1;nc|ENSG00000177426|Q15583|TGIF1	46.45678178249821	0.34452392205506005	1				NaN	NaN	0	NaN	6892	5038	11929
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11933	36.392	NaN	3508.1	30	0	254.3	0.106	+			45810	VAIIARTDL	9	57	486.2977246051028	970.5808962770056	2	486.2978210449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VAIIARTDL_	ENSG00000106348|ENST00000338791|IMPDH1;ENSG00000178035|ENST00000326739|IMPDH2;ENST00000469328.5_1_7:128033063-128040541:-|nuORF;ENST00000484496.5_1_7:128032984-128040541:-|nuORF;IMPDH1|p.A247Gfs*7|1|0.06|ENSG00000106348|chr7:128398490-128398491|-/C|frameshift_variant;nc|ENSG00000106348|P20839-2|IMPDH1;nc|ENSG00000106348|P20839-3|IMPDH1;nc|ENSG00000106348|P20839-4|IMPDH1;nc|ENSG00000106348|P20839-5|IMPDH1;nc|ENSG00000106348|P20839-7|IMPDH1;nc|ENSG00000106348|P20839|IMPDH1	90.60085204095205	0.06317133949006545	1				NaN	NaN	0	NaN	6893	5038	11929
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11934	36.394	NaN	2066.2	30	0	254.55	0.034			+	28280	NEALSLIAL	9	47	472.2763805420375	942.538208150875	2	472.2761535644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NEALSLIAL_	REV__CEP97|p.K618Nfs*15|1|0.41|ENSG00000182504|chr3:101762516-101762516|A/-|frameshift_variant;REV__ENSG00000182504|ENST00000341893|CEP97;REV__ENST00000489172.5_1_3:101443520-101477325:+|nuORF;REV__nc|ENSG00000182504|Q8IW35-2|CEP97	44.377184641726394	0.36891676396732553	1				NaN	NaN	0	NaN	6894	5038	11929
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11941	36.41	NaN	4663.8	30	0	689.98	0.214	+			16421	HESAVTGLSL	10	65	507.26679803310753	1012.5190431330151	2	507.2668151855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HESAVTGLSL_	ENSG00000110107|ENST00000227524|PRPF19;PRPF19|p.S440Hfs*2|1|0.3|ENSG00000110107|chr11:60897945-60897945|A/-|frameshift_variant	52.936696900407355	0.4300801048568001	1				NaN	NaN	0	NaN	6898	5041	11940
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11942	36.414	NaN	1354.5	30	0	201.19	0.106			+	-1	APGRQPQKMM	10	47	593.2985449762916	1184.5825370193832	2	593.2986450195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))APGRQPQKMM_	REV__CON__Q2KJ83	27.882242232435846	0.6521336255503853	1				NaN	NaN	0	NaN	6899	5041	11940
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11943	36.416	NaN	1505.7	30	0	178.36	0.106				-1	DRRLHSPMY	9	48	595.7877197265625	NaN	0	595.7877197265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_DRRLHSPM(Oxidation (M))Y_	ENSG00000204695|ENST00000641895|OR14J1	30.503639358989545	0.3235605894931338	1				NaN	NaN	0	NaN	6900	5041	11940
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11944	36.418	NaN	1128.5	30	0	119.13	0.034			+	20541	KFLFGLVI	8	39	468.79729430275813	NaN	0	468.79705810546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KFLFGLVI_	REV__ENSG00000198223|ENST00000381529|CSF2RA;REV__nc|ENSG00000292357|P15509-2|CSF2RA;REV__nc|ENSG00000292357|P15509-7|CSF2RA;REV__nc|ENSG00000292357|P15509-8|CSF2RA	26.79610172149135	1.7418937515398478	1				NaN	NaN	0	NaN	6901	5041	11940
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11949	36.432	NaN	1848.3	30	0	246.82	0.214	+			20823	KIFSGYLLV	9	53	520.3109950917059	1038.6074372502117	2	520.3115844726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KIFSGYLLV_	ENST00000380752.9_1_13:30084114-30084255:-|nuORF	34.172542307311794	0.4838870758800184	1				NaN	NaN	0	NaN	6903	5044	11948
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11950	36.436	NaN	2245.2	30	0	489.94	0.036	+			47264	VMSQALKATF	10	61	548.2968029794391	1094.5790530256781	2	548.2973022460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VMSQALKATF_	ENSG00000157557|ENST00000360938|ETS2	55.08391021199286	0.41055145962533396	1				NaN	NaN	0	NaN	6904	5044	11948
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11955	36.451	NaN	1762.1	30	0	210.41	0.214				-1	 	0	54	499.2747224072342	498.2674459406342	1	499.2738952636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	6906	5047	11954
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11956	36.454	NaN	1727.9	30	0	231.05	0.035				-1	ACIADFGLAL	10	57	525.7671516639174	NaN	0	525.7678833007812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_AC(Carbamidomethyl (C))IADFGLAL_	ACVR2A|p.G473Dfs*3|1|0.76|ENSG00000121989|chr2:147927149-147927149|G/-|frameshift_variant;ACVR2A|p.K346T|1|0.3|ENSG00000121989|chr2:147920304-147920304|A/C|missense_variant;ACVR2A|p.K437Rfs*5|12|0.58|ENSG00000121989|chr2:147926117-147926117|A/-|frameshift_variant;ACVR2A|p.R438Efs*19|1|0.34|ENSG00000121989|chr2:147926116-147926117|-/A|frameshift_variant;ENSG00000121989|ENST00000241416|ACVR2A;nc|ENSG00000121989|P27037-2|ACVR2A	38.80614096846853	0.372755673314885	1				NaN	NaN	0	NaN	6907	5047	11954
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11961	36.469	NaN	4490.8	30	0	468.52	0.214	+			14295	GSWASLVQK	9	68	488.2663022940947	974.5180516549894	2	488.26611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSWASLVQK_	BRD4|p.P1210L|1|0.19|ENSG00000141867|chr19:15239212-15239212|G/A|missense_variant;ENSG00000141867|ENST00000679869|BRD4	104.0567914643314	0.03506238181059741	1				NaN	NaN	0	NaN	6909	5050	11960
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11962	36.472	NaN	3647.7	30	0	338.11	0.106	+			30855	QEHLQLQNL	9	64	561.7983700525797	1121.5821871719593	2	561.7991943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QEHLQLQNL_	CLTC-CEP95|1|fusion;CLTC|p.A1374*|1|0.05|ENSG00000141367|chr17:59683464-59683465|-/TA|frameshift_variant;CLTC|p.D632Yfs*7|1|0.15|ENSG00000141367|chr17:59666589-59666590|-/TTACA|frameshift_variant;ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000141367|Q00610-2|CLTC	79.71258880314673	0.09879134589249085	1				NaN	NaN	0	NaN	6910	5050	11960
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11963	36.474	NaN	1394.2	30	0	216.17	0.106			+	-1	LPMAFAAGVL	10	60	503.2735388276832	1004.5325247221664	2	503.2736511230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_LPM(Oxidation (M))AFAAGVL_	REV__ENSG00000099721|ENST00000651267|AMELY;REV__nc|ENSG00000099721|Q99218|AMELY	35.200714571348534	0.5923680232273616	1				NaN	NaN	0	NaN	6911	5050	11960
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11964	36.476	NaN	1134.5	30	0	244.94	0.035			+	21702	KQHEQKVE	8	38	513.2743866332129	NaN	0	513.2742919921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KQHEQKVE_	REV__ENSG00000103051|ENST00000323786|COG4;REV__ENST00000526700.5_1_16:70530266-70542451:-|nuORF;REV__nc|ENSG00000103051|Q9H9E3-3|COG4;REV__nc|ENSG00000103051|Q9H9E3|COG4;REV__ST3GAL2-COG4|2|fusion;REV__ST3GAL2-COG4|3|fusion	38.80614096846853	1.7418937515398478	1				NaN	NaN	0	NaN	6912	5050	11960
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11973	36.507	NaN	6505.7	30	0	508.56	0.213	+			40817	SVEEISTLVQK	11	76	616.8402018351009	1231.6658507370016	2	616.840087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVEEISTLVQK_	ENSG00000055950|ENST00000318364|MRPL43;nc|ENSG00000055950|Q8N983-2|MRPL43;nc|ENSG00000055950|Q8N983-3|MRPL43;nc|ENSG00000055950|Q8N983-6|MRPL43;nc|ENSG00000055950|Q8N983-7|MRPL43;nc|ENSG00000055950|Q8N983|MRPL43	187.50397467658743	3.2002380420748523E-06	1				NaN	NaN	0	NaN	6915	5056	11972
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11974	36.51	NaN	4775.9	30	0	775.15	0.106			+	28374	NELHPTLQL	9	68	532.7903308717146	1063.566108810229	2	532.7906494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NELHPTLQL_	REV__ENST00000557963.1_1_15:101421085-101421394:+|nuORF	76.7741389293348	0.11149722112137898	1				NaN	NaN	0	NaN	6916	5056	11972
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11975	36.512	NaN	4923.3	30	0	969.99	0.106	+			1033	AEKLITQTF	9	61	525.7952292425691	1049.5759055519381	2	525.7957153320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEKLITQTF_	ENSG00000090273|ENST00000321265|NUDC	114.85826248499774	0.024312442104607014	1				NaN	NaN	0	NaN	6917	5056	11972
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11976	36.514	NaN	1991.3	30	0	247.12	0.106			+	49518	VYAANPDMAQ	10	54	540.2448888347349	1078.4752247362696	2	540.2453002929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VYAANPDMAQ_	REV__ENSG00000170099|ENST00000341584|SERPINA6	34.172542307311794	0.6007644933930345	1				NaN	NaN	0	NaN	6918	5056	11972
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11977	36.516	NaN	523.06	30	0	76.307	0.106			+	17915	IGIPGAAGAPG	11	32	440.748046875	NaN	0	440.748046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IGIPGAAGAPG_	REV__COL5A1|p.D1172Tfs*104|1|0.22|ENSG00000130635|chr9:134810290-134810290|G/-|frameshift_variant;REV__COL5A1|p.G1351Efs*137|2|0.4|ENSG00000130635|chr9:134815605-134815605|C/-|frameshift_variant;REV__COL5A1|p.P1302Rfs*186|1|0.05|ENSG00000130635|chr9:134814030-134814030|C/-|frameshift_variant;REV__COL5A1|p.P1388Lfs*100|1|0.55|ENSG00000130635|chr9:134817061-134817061|G/-|frameshift_variant;REV__ENSG00000130635|ENST00000371817|COL5A1;REV__nc|ENSG00000130635|P20908-2|COL5A1	24.20275056022122	0.456735970842152	1				NaN	NaN	0	NaN	6919	5056	11972
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11978	36.517	NaN	1203.7	30	0	480.43	0.039	+			23708	LAVALGFF	8	34	419.24708907554697	NaN	0	419.2472839355469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LAVALGFF_	ENSG00000164161|ENST00000296575|HHIP;nc|ENSG00000164161|Q96QV1-2|HHIP	24.504012794735996	1.7418937515398478	1				NaN	NaN	0	NaN	6920	5056	11972
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11984	36.534	NaN	3006.9	30	0	754.15	0.143				-1	AEWAACAGY	9	59	499.70577458991573	997.3969962466315	2	499.7054748535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_AEWAAC(Carbamidomethyl (C))AGY_	ENSG00000182218|ENST00000330710|HHIPL1;nc|ENSG00000182218|Q96JK4-2|HHIPL1	35.200714571348534	0.47427825964483533	1				NaN	NaN	0	NaN	6923	5059	11983
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11990	36.55	NaN	1210	30	0	124.99	0.214	+			25142	LLSDLEELN	9	54	523.273999013491	1044.533445093782	2	523.2745361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LLSDLEELN_	ENSG00000024862|ENST00000617445|CCDC28A;nc|ENSG00000024862|Q8IWP9|CCDC28A	27.882242232435846	0.5426732730940306	1				NaN	NaN	0	NaN	6926	5062	11989
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	11991	36.554	NaN	1216.1	30	0	303.49	0.039	+			2141	ALLDEVRGRRA	11	39	419.24708907554697	NaN	0	418.91192626953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ALLDEVRGRRA_	ENST00000478389.5_1_20:57566845-57568278:+|nuORF	30.568863376406313	0.42918353898720446	1				NaN	NaN	0	NaN	6927	5062	11989
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12001	36.587	NaN	11748	30	0	8027.7	0.214	+			38013	SPLRLAYSA	9	70	489.27406487148824	976.5335768097765	2	489.2738342285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SPLRLAYSA_	ENSG00000142700|ENST00000404795|DMRTA2	39.252832667884924	0.4290233611298554	1				NaN	NaN	0	NaN	6931	5068	12000
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12002	36.591	NaN	2908.3	30	0	344.91	0.037	+			42511	TAPPERQPQV	10	66	561.7983700525797	1121.5821871719593	2	561.7989501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAPPERQPQV_	ENSG00000113739|ENST00000265087|STC2	39.252832667884924	0.5560298534376815	1				NaN	NaN	0	NaN	6932	5068	12000
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12006	36.605	NaN	2970.9	30	0	755.75	0.214	+			34775	RYIPTAAAF	9	53	505.2770159174491	1008.5394789016982	2	505.2767333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RYIPTAAAF_	ENSG00000058262|ENST00000243253|SEC61A1;ENSG00000065665|ENST00000298428|SEC61A2;ENST00000498837.1_1_3:127786720-127788502:+|nuORF;nc|ENSG00000058262|P61619-3|SEC61A1;nc|ENSG00000065665|Q9H9S3-3|SEC61A2	39.252832667884924	0.4290233611298554	1				NaN	NaN	0	NaN	6933	5071	12005
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12007	36.609	NaN	2381.5	30	0	238.59	0.106	+			45532	TYITSVSRL	9	55	520.2923482347384	1038.5701435362766	2	520.2929077148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TYITSVSRL_	ENSG00000164823|ENST00000451899|OSGIN2;nc|ENSG00000164823|Q9Y236|OSGIN2	46.45678178249821	0.34452392205506005	1				NaN	NaN	0	NaN	6934	5071	12005
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12008	36.61	NaN	1441.3	30	0	168.71	0.106			+	23572	LALLNNKAL	9	57	485.3079750492982	968.6013971653964	2	485.3077392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LALLNNKAL_	REV__ENSG00000196208|ENST00000381486|GREB1;REV__GREB1|p.K311Nfs*65|1|0.16|ENSG00000196208|chr2:11585181-11585181|C/-|frameshift_variant;REV__nc|ENSG00000196208|Q4ZG55-2|GREB1;REV__nc|ENSG00000196208|Q4ZG55-3|GREB1	50.0245360154114	0.3026755932229825	1				NaN	NaN	0	NaN	6935	5071	12005
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12009	36.612	NaN	1339.6	30	0	297.64	0.032			+	28555	NKAGIGFL	8	38	410.23970129523076	818.4648496572615	2	410.2396545410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NKAGIGFL_	REV__tr|U7SWV0|U7SWV0_FUSNUOrganicsolventtolerance-likeN-terminaldomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01181PE=4SV=1	35.200714571348534	0.6875396545722289	1				NaN	NaN	0	NaN	6936	5071	12005
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12024	36.676	NaN	1881.3	30	0	191.83	0.143	+			13283	GIYAYGFEK	9	58	524.2609303678437	1046.5073078024873	2	524.2621459960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GIYAYGFEK_	EIF4A2|p.Q209Lfs*23|1|0.03|ENSG00000156976|chr3:186786269-186786270|-/ACTGTCATTTCTAGATCTAC|frameshift_variant;ENSG00000141543|ENST00000649764|EIF4A3;ENSG00000156976|ENST00000323963|EIF4A2;ENSG00000161960|ENST00000293831|EIF4A1;ENST00000465032.5_1_3:186501384-186502902:+|nuORF;ENST00000465222.1_1_3:186502277-186502505:+|nuORF;ENST00000465267.5_1_3:186501384-186502902:+|nuORF;ENST00000467585.1_1_3:186502182-186503751:+|nuORF;ENST00000485101.5_1_3:186501384-186502505:+|nuORF;ENST00000486805.5_1_3:186501384-186502505:+|nuORF;ENST00000575957.1_1_17:78115565-78120760:-|nuORF;ENST00000578324.5_1_17:7477602-7481249:+|nuORF;ENST00000580461.5_1_17:7476163-7478717:+|nuORF;ENST00000581621.1_1_17:7476159-7481249:+|nuORF;ENST00000582848.5_1_17:7476159-7480015:+|nuORF;ENST00000584054.5_1_17:7476159-7478064:+|nuORF;ENST00000584712.5_1_17:7476159-7478717:+|nuORF;ENST00000584901.5_1_17:7476159-7480015:+|nuORF;nc|ENSG00000156976|Q14240-2|EIF4A2;nc|ENSG00000161960|P60842-2|EIF4A1	40.77816245573522	0.41113185337114944	1				NaN	NaN	0	NaN	6939	5083	12023
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12028	36.692	NaN	1444.4	30	0	151.12	0.145			+	33222	RFPSDAPSVY	10	57	569.7815857811622	NaN	0	569.7824096679688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RFPSDAPSVY_	REV__ENSG00000106327|ENST00000223051|TFR2;REV__ENST00000465294.5_1_7:100218482-100225153:-|nuORF;REV__ENST00000476304.5_1_7:100218482-100231271:-|nuORF;REV__nc|ENSG00000106327|Q9UP52-2|TFR2;REV__nc|ENSG00000106327|Q9UP52-3|TFR2	44.377184641726394	0.34115073642966565	1				NaN	NaN	0	NaN	6940	5086	12027
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12036	36.725	NaN	1443.4	30	0	350.18	0.214	+			35080	SAFLISRLT	9	29	336.53414058234347	1006.5805923472304	3	336.5343322753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAFLISRLT_	ENST00000492310.5_1_7:43153648-43477745:+|nuORF	16.473147378115264	0.6112419832031293	1				NaN	NaN	0	NaN	6942	5092	12035
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12037	36.729	NaN	3616.9	30	0	724.76	0.106			+	-1	PLCLQGWARRR	11	76	706.8885409187574	1411.7625289043146	2	706.88818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_PLC(Carbamidomethyl (C))LQGWARRR_	REV__ENSG00000161609|ENST00000447857|KASH5	14.864876125193954	0.8008860636109596	1				NaN	NaN	0	NaN	6943	5092	12035
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12038	36.731	NaN	1788.3	30	0	321.7	0.106			+	43027	TEKTVSGPSV	10	43	502.76669978238687	1003.5188466315738	2	502.76617431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TEKTVSGPSV_	REV__ENSG00000151690|ENST00000392328|MFSD6;REV__MFSD6|p.F499Lfs*8|2|0.17|ENSG00000151690|chr2:190437520-190437520|T/-|frameshift_variant;REV__MFSD6|p.L503Hfs*56|1|0.33|ENSG00000151690|chr2:190437536-190437555|CTTATTGAATTGATCGGCCA/-|frameshift_variant	46.45678178249821	0.4896490706773647	1				NaN	NaN	0	NaN	6944	5092	12035
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12039	36.732	NaN	1868.4	30	0	353.49	0.106	+			1950	AIVAYGLYK	9	41	499.2893617775807	996.5641706219615	2	499.289794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AIVAYGLYK_	ENSG00000181061|ENST00000321331|HIGD1A;ENST00000470543.1_1_3:42826765-42845976:-|nuORF;nc|ENSG00000181061|Q9Y241-2|HIGD1A	57.81127852772723	0.2318599694398087	1				NaN	NaN	0	NaN	6945	5092	12035
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12040	36.734	NaN	1268.4	30	0	208.03	0.036			+	11594	FPRRGRPSP	9	57	535.3036254006805	NaN	0	535.3040161132812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FPRRGRPSP_	REV__ENST00000418273.2_1_10:88729621-88729924:-|nuORF	30.317721548370564	0.32449924987115025	1				NaN	NaN	0	NaN	6946	5092	12035
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12045	36.749	NaN	1068	30	0	165.94	0.214				-1	 	0	38	329.2013166275926	656.3880803219852	2	329.2013244628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	6948	5095	12044
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12046	36.752	NaN	1152.9	30	0	186.97	0.036	+			419	AATGSEILLW	10	48	530.7871704101562	NaN	0	530.7871704101562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AATGSEILLW_	ENSG00000160410|ENST00000291842|SHKBP1;nc|ENSG00000160410|Q8TBC3-2|SHKBP1;SHKBP1|p.S624Ifs*31|1|0.32|ENSG00000160410|chr19:40590830-40590831|-/A|frameshift_variant	29.14955571784316	0.4044631218331212	1				NaN	NaN	0	NaN	6949	5095	12044
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12055	36.785	NaN	1852.5	30	0	209.07	0.214				-1	DMLIRCVK	8	57	525.7772469612547	NaN	0	525.777099609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_DM(Oxidation (M))LIRC(Carbamidomethyl (C))VK_	ENST00000367059.3_2_1:207647596-207648195:+|nuORF	49.44154591367651	1.7418937515398478	1				NaN	NaN	0	NaN	6952	5101	12054
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12056	36.789	NaN	1074.9	30	0	80.708	0.034	+			9115	EGLAFRRP	8	46	473.26579948222155	NaN	0	473.265869140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EGLAFRRP_	ENSG00000006704|ENST00000424337|GTF2IRD1;nc|ENSG00000006704|Q9UHL9-3|GTF2IRD1;nc|ENSG00000006704|Q9UHL9|GTF2IRD1	55.50420428727701	1.7418937515398478	1				NaN	NaN	0	NaN	6953	5101	12054
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12067	36.836	NaN	1624.9	30	0	121.56	0.214			+	29018	NSQYPRMRE	9	57	590.779420745448	1179.5442885576958	2	590.77978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NSQYPRMRE_	REV__ENSG00000113319|ENST00000265080|RASGRF2;REV__ENST00000502677.1_1_5:80366283-80383248:+|nuORF;REV__RASGRF2|p.E490Gfs*42|1|0.19|ENSG00000113319|chr5:81092871-81092872|-/A|frameshift_variant	33.921630207806714	0.48623198279849766	1				NaN	NaN	0	NaN	6955	5110	12066
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12068	36.839	NaN	1926.4	30	0	177.28	0.106				-1	SIEYWFRCMD	10	61	711.7967053578288	NaN	0	711.7957153320312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_SIEYWFRC(Carbamidomethyl (C))M(Oxidation (M))D_	ENSG00000073711|ENST00000264977|PPP2R3A;ENSG00000167393|ENST00000390665|PPP2R3B;ENST00000468169.6_1_X:299440-306311:-|nuORF;ENST00000477110.6_1_X:299337-302121:-|nuORF;nc|ENSG00000073711|Q06190-2|PPP2R3A;nc|ENSG00000073711|Q06190-3|PPP2R3A	19.1035232394073	0.4201028297492154	1				NaN	NaN	0	NaN	6956	5110	12066
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12069	36.841	NaN	1474.8	30	0	177.6	0.037	+			51599	YYQHIVTTL	9	52	569.2997698040532	1136.5849866749063	2	569.801513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YYQHIVTTL_	ENSG00000116005|ENST00000433351|PCYOX1;nc|ENSG00000116005|Q9UHG3-2|PCYOX1	37.15910966729921	0.4535818937225704	1				NaN	NaN	0	NaN	6957	5110	12066
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12073	36.855	NaN	2244.3	30	0	293.04	0.213			+	10570	EYFSSVAMGLC	11	60	603.7619314534843	1205.5093099737685	2	603.7616577148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EYFSSVAMGLC_	REV__ABCA3|p.G1334Afs*12|1|0.4|ENSG00000167972|chr16:2283220-2283220|C/-|frameshift_variant;REV__ENSG00000167972|ENST00000301732|ABCA3	42.33807565288922	0.5259510355945483	1				NaN	NaN	0	NaN	6958	5113	12072
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12074	36.859	NaN	2121.5	30	0	220.4	0.037			+	32993	REESADFDIV	10	60	590.779420745448	1179.5442885576958	2	591.2797241210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_REESADFDIV_	REV__ENSG00000168702|ENST00000389484|LRP1B;REV__LRP1B|p.C2682Vfs*15|1|0.3|ENSG00000168702|chr2:140516994-140516994|A/-|frameshift_variant;REV__LRP1B|p.C3762Lfs*2|1|0.32|ENSG00000168702|chr2:140358089-140358090|-/A|frameshift_variant;REV__LRP1B|p.G4130Mfs*20|1|0.06|ENSG00000168702|chr2:140324019-140324020|-/AT|frameshift_variant;REV__LRP1B|p.H4368Tfs*4|1|0.47|ENSG00000168702|chr2:140274465-140274465|C/-|frameshift_variant;REV__LRP1B|p.I3028Nfs*2|1|0.39|ENSG00000168702|chr2:140492645-140492646|-/T|frameshift_variant;REV__LRP1B|p.K2543Nfs*42|1|0.08|ENSG00000168702|chr2:140536594-140536594|T/-|frameshift_variant;REV__LRP1B|p.N3100Kfs*6|1|0.21|ENSG00000168702|chr2:140485468-140485469|-/T|frameshift_variant;REV__LRP1B|p.N3434Tfs*84|1|0.47|ENSG00000168702|chr2:140442617-140442617|T/-|frameshift_variant;REV__LRP1B|p.N4135Mfs*14|1|0.13|ENSG00000168702|chr2:140324003-140324003|T/-|frameshift_variant;REV__LRP1B|p.R3957Kfs*11|2|0.15|ENSG00000168702|chr2:140350819-140350820|-/T|frameshift_variant;REV__LRP1B|p.T2640Pfs*5|1|0.12|ENSG00000168702|chr2:140525952-140525952|T/-|frameshift_variant;REV__LRP1B|p.Y3120*|1|0.16|ENSG00000168702|chr2:140485402-140485408|AGTAGGG/-|frameshift_variant	32.81241826257853	0.6118718159329168	1				NaN	NaN	0	NaN	6959	5113	12072
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12080	36.875	NaN	1475.6	30	0	481.29	0.214			+	7364	DDKPTLYPL	9	43	531.2775914035072	NaN	0	531.277099609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DDKPTLYPL_	REV__ENSG00000140718|ENST00000471389|FTO;REV__ENST00000570395.1_1_16:53844054-53848662:+|nuORF;REV__FTO|p.E37A|1|0.35|ENSG00000140718|chr16:53810204-53810204|A/C|missense_variant	37.81151784470057	0.28666463014928195	1				NaN	NaN	0	NaN	6962	5116	12079
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12081	36.879	NaN	957.4	30	0	145.82	0.106	+			12375	GDSKPPRFQ	9	39	516.2651621466084	1030.5157713600167	2	516.2649536132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GDSKPPRFQ_	ENST00000462710.5_1_1:24974544-24974727:+|nuORF	27.882242232435846	0.5426732730940306	1				NaN	NaN	0	NaN	6963	5116	12079
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12082	36.881	NaN	1584.7	30	0	135.42	0.036	+			18432	ISCVNLAFK	9	65	526.2837646583213	1050.5529763834425	2	526.7860717773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_ISC(Carbamidomethyl (C))VNLAFK_	ENST00000227758.6_3_11:102219989-102220022:+|nuORF	74.25504064058377	0.12238981753128622	1				NaN	NaN	0	NaN	6964	5116	12079
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12087	36.895	NaN	2701.1	30	0	269.32	0.215	+			42808	TEAQANQISL	10	56	537.7748273249624	1073.5351017167247	2	537.7754516601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEAQANQISL_	ENSG00000110442|ENST00000263401|COMMD9;nc|ENSG00000110442|Q9P000-2|COMMD9	61.76455937419982	0.3497917639301274	1				NaN	NaN	0	NaN	6966	5119	12086
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12088	36.899	NaN	1920.7	30	0	270.9	0.106				-1	WPNVPLVHM	9	55	554.78471991591	NaN	0	555.2659912109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_WPNVPLVHM(Oxidation (M))_	ENST00000367051.5_1_1:207793326-207795335:+|nuORF	26.79610172149135	0.34227917631780574	1				NaN	NaN	0	NaN	6967	5119	12086
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12089	36.901	NaN	1790.1	30	0	285.47	0.106	+			37208	SKGSIYVW	8	51	470.25007243721814	938.4855919412363	2	470.2496337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SKGSIYVW_	PCSK2|p.G299S|1|0.48|ENSG00000125851|chr20:17453751-17453751|G/A|missense_variant	31.954861631926434	0.7126016770032289	1				NaN	NaN	0	NaN	6968	5119	12086
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12090	36.903	NaN	938.57	30	0	91.805	0.034	+			7983	DSWGLGVLL	9	45	480.2613655767089	NaN	0	480.26141357421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DSWGLGVLL_	ENSG00000231274|ENST00000612221|SBK3	42.47446043378293	0.25855550551448697	1				NaN	NaN	0	NaN	6969	5119	12086
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12100	36.926	NaN	1813.7	30	0	198.6	0.143				-1	SMILLMAIL	9	55	510.7960297191208	1019.5775065050416	2	510.7960205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_SM(Oxidation (M))ILLMAIL_	ENSG00000198763|ENST00000361453|MT-ND2	52.29916861842294	0.2778091507991977	1				NaN	NaN	0	NaN	6976	5122	12099
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12106	36.944	NaN	992.61	30	0	103.28	0.141	+			11832	FSVTGRVL	8	44	439.7584406428858	877.5023283525716	2	439.75787353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FSVTGRVL_	ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;nc|ENSG00000185164|Q5JPE7-3|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2;NOMO1|p.P1102Hfs*42|1|0.36|ENSG00000103512|chr16:14886838-14886838|C/-|frameshift_variant	56.72105179125745	0.5342425954139568	1				NaN	NaN	0	NaN	6979	5125	12105
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12112	36.962	NaN	13140	30	0	2433.1	0.215	+			41585	SVQGIIIYR	9	61	524.8110620141895	1047.6075710951789	2	524.8116455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVQGIIIYR_	ENSG00000005022|ENST00000317881|SLC25A5;ENSG00000151729|ENST00000281456|SLC25A4;ENSG00000169100|ENST00000381401|SLC25A6;ENST00000406156.2_1_6:121975405-121975696:+|nuORF;ENST00000435239.1_1_7:32511604-32512018:+|nuORF	126.24258497203832	0.01742065577488747	1				NaN	NaN	0	NaN	6982	5128	12111
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12113	36.966	NaN	1828.4	30	0	244.48	0.106			+	37665	SLRDVFASL	9	53	504.27933403793884	1006.5441151426777	2	504.2795104980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLRDVFASL_	REV__CLASP2|p.L1169Ffs*6|1|0.14|ENSG00000163539|chr3:33510729-33510730|-/A|frameshift_variant;REV__CLASP2|p.M744Nfs*4|1|0.19|ENSG00000163539|chr3:33560868-33560869|-/T|frameshift_variant;REV__CLASP2|p.M744Wfs*33|2|0.29|ENSG00000163539|chr3:33560869-33560869|T/-|frameshift_variant;REV__CLASP2|p.N188Kfs*2|1|0.21|ENSG00000163539|chr3:33619657-33619658|-/T|frameshift_variant;REV__ENSG00000163539|ENST00000682230|CLASP2;REV__ENST00000467956.1_1_3:33731266-33759494:-|nuORF;REV__nc|ENSG00000163539|O75122-3|CLASP2	54.776311868738084	0.25715957988447635	1				NaN	NaN	0	NaN	6983	5128	12111
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12114	36.967	NaN	1447.6	30	0	126.38	0.035	+			20007	KEIGELTQL	9	52	515.793106989448	1029.571661045696	2	515.79296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEIGELTQL_	ENSG00000148484|ENST00000345264|RSU1;ENST00000464074.6_1_10:16769067-16859404:-|nuORF;nc|ENSG00000148484|Q15404-2|RSU1	47.227680397652996	0.3354815899219835	1				NaN	NaN	0	NaN	6984	5128	12111
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12120	36.984	NaN	2631.9	30	0	383.72	0.145	+			29398	PARQAAAQRCP	11	59	584.805119324557	NaN	0	584.8052978515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PARQAAAQRCP_	ENSG00000100399|ENST00000216241|CHADL;nc|ENSG00000100399|Q6NUI6-2|CHADL	30.317721548370564	0.4303027717346894	1				NaN	NaN	0	NaN	6987	5131	12119
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12126	37.002	NaN	2481.3	30	0	253.44	0.145			+	37312	SLDQDDVSFNS	11	64	613.7610848910783	1225.5076168489566	2	613.7609252929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLDQDDVSFNS_	REV__ARFGEF3|p.E1064Sfs*10|1|0.29|ENSG00000112379|chr6:138291869-138291869|C/-|frameshift_variant;REV__ARFGEF3|p.F1125*|1|0.07|ENSG00000112379|chr6:138293997-138293998|TT/-|frameshift_variant;REV__ENSG00000112379|ENST00000251691|ARFGEF3	31.634271133179894	0.6579734920221648	1				NaN	NaN	0	NaN	6990	5134	12125
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12132	37.02	NaN	1436.6	30	0	120.36	0.142	+			1153	AEMYVAKF	8	50	479.73861501622986	957.4626770992597	2	480.2396545410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEMYVAKF_	EEF2|p.E241Rfs*13|1|0.26|ENSG00000167658|chr19:3982316-3982316|C/-|frameshift_variant;ENSG00000167658|ENST00000309311|EEF2	51.33545320467046	0.5859736979383976	1				NaN	NaN	0	NaN	6993	5137	12131
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12137	37.036	NaN	1490.9	30	0	113.76	0.145			+	43057	TELKKRTME	9	44	568.309814453125	NaN	0	568.309814453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TELKKRTME_	REV__tr|U7T6K5|U7T6K5_FUSNUHelicaseC-terminaldomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00274PE=4SV=1	35.61828744233558	0.29773779453147337	1				NaN	NaN	0	NaN	6995	5140	12136
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12142	37.053	NaN	1405.3	30	0	316.32	0.214			+	13413	GLGCDFRY	8	47	465.7109356091609	929.4073182851218	2	465.7104187011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GLGCDFRY_	REV__KLHL25|p.E514Gfs*5|1|0.18|ENSG00000183655|chr15:85768252-85768270|CGCGTCCACTGGTTGGTCT/-|frameshift_variant	33.51558372728122	0.7005509609380386	1				NaN	NaN	0	NaN	6997	5143	12141
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12143	37.056	NaN	1947	30	0	166.6	0.106	+			37644	SLQMMKYWANF	11	71	709.8305691133328	1417.6465852934655	2	709.8275146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLQMMKYWANF_	ENSG00000172824|ENST00000648724|CES4A;ENST00000535543.5_1_16:67034893-67043042:+|nuORF;ENST00000543561.1_1_16:67040205-67043042:+|nuORF;ENST00000544478.1_1_16:67040601-67043042:+|nuORF;nc|ENSG00000172824|Q5XG92-2|CES4A;nc|ENSG00000172824|Q5XG92-4|CES4A;nc|ENSG00000172824|Q5XG92-6|CES4A	21.68575002086885	0.7623253651248338	1				NaN	NaN	0	NaN	6998	5143	12141
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12144	37.058	NaN	1136.9	30	0	84.248	0.035	+			11922	FVDEGIKTL	9	58	511.28220192891456	NaN	0	511.28326416015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FVDEGIKTL_	ENSG00000070501|ENST00000265421|POLB	56.72105179125745	0.16330365735109603	1				NaN	NaN	0	NaN	6999	5143	12141
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12149	37.073	NaN	2934.3	30	0	608.12	0.146				-1	 	0	62	706.8885409187574	1411.7625289043146	2	706.888427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7001	5146	12148
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12155	37.091	NaN	1979.7	30	0	424.29	0.214	+			35422	SARLVYSVL	9	39	336.53414058234347	1006.5805923472304	3	336.5346374511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SARLVYSVL_	CDH22|p.I579Sfs*4|1|0.33|ENSG00000149654|chr20:46178126-46178126|T/-|frameshift_variant;ENSG00000149654|ENST00000537909|CDH22	17.364965105453717	0.6112419832031293	1				NaN	NaN	0	NaN	7004	5149	12154
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12156	37.094	NaN	1881.1	30	0	214.72	0.106			+	21428	KMYLVCMFV	9	61	595.7917774220437	1189.5690019108872	2	596.2931518554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_KMYLVC(Carbamidomethyl (C))MFV_	REV__ENST00000370435.4_1_6:72014589-72014727:+|nuORF	40.5726180659479	0.4135428067754104	1				NaN	NaN	0	NaN	7005	5149	12154
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12157	37.096	NaN	1552.1	30	0	228.33	0.036	+			37418	SLGPATQVVPI	11	50	541.3156841015098	1080.6168152698194	2	541.818603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLGPATQVVPI_	PEX14|p.V89I|1|0.09|ENSG00000142655|chr1:10599333-10599333|G/A|missense_variant	32.75053402867276	0.6462648045997152	1				NaN	NaN	0	NaN	7006	5149	12154
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12161	37.11	NaN	1675.1	30	0	167.47	0.144	+			18924	IVNDFAYMK	9	60	550.7767296236811	NaN	0	550.7758178710938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IVNDFAYMK_	ENSG00000170348|ENST00000303575|TMED10;ENST00000534816.1_1_8:146220430-146220868:+|nuORF;ENST00000555036.1_1_14:75602424-75614456:-|nuORF;ENST00000555873.1_1_14:75601590-75605782:-|nuORF;ENST00000556969.5_1_14:75601590-75614465:-|nuORF	51.19269402634007	0.19847346126499396	1				NaN	NaN	0	NaN	7007	5152	12160
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12166	37.127	NaN	1213.5	30	0	152.83	0.214	+			46248	VEERNLLSV	9	48	529.7959463609594	1057.5773397887187	2	529.796142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VEERNLLSV_	ENSG00000108953|ENST00000264335|YWHAE;ENST00000486241.1_1_17:1265194-1303470:-|nuORF;ENST00000489287.1_1_17:1268113-1303470:-|nuORF;nc|ENSG00000108953|P62258-2|YWHAE	37.81151784470057	0.4459294069877048	1				NaN	NaN	0	NaN	7009	5155	12165
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12167	37.13	NaN	1090	30	0	171.46	0.034	+			2089	ALFDGVVSK	9	48	468.2628708828032	NaN	0	468.2641296386719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ALFDGVVSK_	ENSG00000151806|ENST00000281543|GUF1;ENST00000506793.5_1_4:44680541-44700695:+|nuORF;GUF1|p.K645Sfs*2|5|0.23|ENSG00000151806|chr4:44698598-44698598|A/-|frameshift_variant	54.776311868738084	0.17377682019723872	1				NaN	NaN	0	NaN	7010	5155	12165
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12171	37.144	NaN	1479.8	30	0	167.29	0.214			+	-1	VMDMILSGRQ	10	53	591.2843363744814	1180.5541198157628	2	591.2852172851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_VM(Oxidation (M))DM(Oxidation (M))ILSGRQ_	REV__ENSG00000183454|ENST00000330684|GRIN2A;REV__GRIN2A|p.S1341Afs*56|4|0.26|ENSG00000183454|chr16:9763523-9763523|T/-|frameshift_variant;REV__nc|ENSG00000183454|Q12879-2|GRIN2A	30.317721548370564	0.6322445173429027	1				NaN	NaN	0	NaN	7011	5158	12170
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12172	37.148	NaN	1159.4	30	0	262.83	0.106			+	-1	ARNKPKAMR	9	41	544.3104822516382	1086.6064115700763	2	544.3118896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_ARNKPKAM(Oxidation (M))R_	REV__ENSG00000184867|ENST00000356824|ARMCX2	30.503639358989545	0.5181749237905803	1				NaN	NaN	0	NaN	7012	5158	12170
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12173	37.15	NaN	1021.6	30	0	294.37	0.034			+	10351	ETVDIKKI	8	38	473.2845192699548	944.5544856067096	2	473.2845458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ETVDIKKI_	REV__tr|U7T2I3|U7T2I3_FUSNUCobyricacidsynthaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=cobQPE=3SV=1	35.61828744233558	0.6843154725607303	1				NaN	NaN	0	NaN	7013	5158	12170
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12179	37.166	NaN	2193.8	30	0	369.29	0.214	+			8716	EEEEAATVIK	10	51	559.7855094052647	NaN	0	559.7857055664062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EEEEAATVIK_	ENSG00000112041|ENST00000229771|TULP1;nc|ENSG00000112041|O00294-2|TULP1;TULP1|p.Q301Rfs*9|1|0.43|ENSG00000112041|chr6:35506101-35506101|G/-|frameshift_variant	37.81151784470057	0.3760215235790741	1				NaN	NaN	0	NaN	7016	5161	12178
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12180	37.17	NaN	1025.2	30	0	196.93	0.033	+			38067	SPSNQPML	8	40	437.21016267962403	872.4057724260481	2	437.21002197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SPSNQPML_	ENST00000465745.6_1_9:35093318-35093600:-|nuORF;ENST00000474436.1_1_9:35093318-35095562:-|nuORF	40.5726180659479	0.6527593143185008	1				NaN	NaN	0	NaN	7017	5161	12178
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12187	37.186	NaN	603.32	30	0	96.272	0.214				-1	 	0	30	390.21310473439553	389.20582826779554	1	390.2130432128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7021	5164	12186
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12188	37.19	NaN	1630.2	30	0	221.87	0.036	+			44779	TTQKLVLEY	9	61	547.8087128007134	NaN	0	547.8092651367188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTQKLVLEY_	ENSG00000136848|ENST00000408936|DAB2IP;nc|ENSG00000136848|Q5VWQ8-2|DAB2IP;nc|ENSG00000136848|Q5VWQ8-3|DAB2IP;nc|ENSG00000136848|Q5VWQ8-4|DAB2IP;nc|ENSG00000136848|Q5VWQ8-5|DAB2IP	25.57405402267927	0.3484490411150625	1				NaN	NaN	0	NaN	7022	5164	12186
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12194	37.206	NaN	1700.4	30	0	223.08	0.142	+			12907	GESGIKVAVL	10	50	486.78977432778134	971.5649957223627	2	486.78961181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GESGIKVAVL_	ENSG00000164091|ENST00000296490|WDR82;ENST00000487402.1_1_3:52291508-52301068:-|nuORF	47.95952297671804	0.47580206326914537	1				NaN	NaN	0	NaN	7025	5167	12193
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12198	37.222	NaN	1569.5	30	0	201.32	0.144			+	44176	TQTPVQPVVL	10	55	541.3156841015098	1080.6168152698194	2	541.81787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TQTPVQPVVL_	REV__ENST00000461035.5_1_1:45478567-45479041:+|nuORF	24.519189625965996	0.6795976720565101	1				NaN	NaN	0	NaN	7026	5170	12197
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12206	37.255	NaN	2975.3	30	0	322.47	0.214	+			49268	VVQDGITLITK	11	72	593.8557231392734	1185.6968933453468	2	593.85546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVQDGITLITK_	ENSG00000079246|ENST00000392132|XRCC5	100.08592035916087	0.060509483168783906	1				NaN	NaN	0	NaN	7028	5176	12205
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12207	37.258	NaN	1735.1	30	0	143.83	0.036	+			46526	VEYQMKSVL	9	54	548.788994656634	NaN	0	548.7891845703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VEYQMKSVL_	ENSG00000159140|ENST00000356577|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-4|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-6|SON;nc|ENSG00000159140|P18583-7|SON;nc|ENSG00000159140|P18583-8|SON;nc|ENSG00000159140|P18583-9|SON	66.96192283764107	0.11962625698446946	1				NaN	NaN	0	NaN	7029	5176	12205
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12220	37.297	NaN	4532.5	30	0	769.79	0.215	+			20205	KELGITAL	8	53	422.76043628592424	843.5063196386485	2	422.7603454589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KELGITAL_	ENSG00000164587|ENST00000407193|RPS14	79.71258880314673	0.32596852995588826	1				NaN	NaN	0	NaN	7036	5182	12219
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12221	37.301	NaN	1460.6	30	0	106.03	0.035	+			41586	SVQGIIIYR	9	56	524.8110620141895	1047.6075710951789	2	524.8108520507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVQGIIIYR_	ENSG00000005022|ENST00000317881|SLC25A5;ENSG00000151729|ENST00000281456|SLC25A4;ENSG00000169100|ENST00000381401|SLC25A6;ENST00000406156.2_1_6:121975405-121975696:+|nuORF;ENST00000435239.1_1_7:32511604-32512018:+|nuORF	53.08895987439943	0.27122541748218487	1				NaN	NaN	0	NaN	7037	5182	12219
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12225	37.315	NaN	3406	30	0	540.42	0.143			+	51260	YRDLGIASL	9	59	504.27933403793884	1006.5441151426777	2	504.2796325683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YRDLGIASL_	REV__ENSG00000214943|ENST00000399285|GPR33	58.22992032128504	0.22837015374068087	1				NaN	NaN	0	NaN	7038	5185	12224
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12229	37.331	NaN	2075.5	30	0	320.8	0.214			+	-1	ATIEIEEMAVA	11	50	596.7916792072368	1191.5688054812736	2	596.7915649414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ATIEIEEM(Oxidation (M))AVA_	REV__STAB2|p.D630A|1|0.05|ENSG00000136011|chr12:103662865-103662865|A/C|missense_variant	26.69291269510374	0.70980431218767	1				NaN	NaN	0	NaN	7039	5188	12228
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12230	37.334	NaN	776.62	30	0	139.71	0.033			+	51366	YTGQSGHE	8	23	439.68468797776194	NaN	0	439.6846008300781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YTGQSGHE_	REV__ENSG00000078018|ENST00000682079|MAP2;REV__MAP2|p.K351Nfs*38|1|0.28|ENSG00000078018|chr2:209693218-209693218|A/-|frameshift_variant;REV__MAP2|p.T1474Nfs*22|1|0.33|ENSG00000078018|chr2:209696942-209696943|-/A|frameshift_variant;REV__MAP2|p.T1474Qfs*14|2|0.28|ENSG00000078018|chr2:209696943-209696943|A/-|frameshift_variant;REV__nc|ENSG00000078018|P11137-2|MAP2;REV__nc|ENSG00000078018|P11137-3|MAP2;REV__nc|ENSG00000078018|P11137-4|MAP2	7.690282842768113	1.7418937515398478	1				NaN	NaN	0	NaN	7040	5188	12228
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12236	37.35	NaN	2594.8	30	0	1126.3	0.144				-1	 	0	47	359.20369581745877	1074.5892580525763	3	359.20355224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7043	5191	12235
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12240	37.366	NaN	1369.2	30	0	139.27	0.145				-1	LNLATMDIICT	11	54	632.8194858227339	NaN	0	632.819091796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_LNLATMDIIC(Carbamidomethyl (C))T_	ENSG00000256574|ENST00000553795|OR13A1	21.68575002086885	0.456735970842152	1				NaN	NaN	0	NaN	7044	5194	12239
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12245	37.383	NaN	950.18	30	0	186.85	0.214	+			24767	LIALVDRSP	9	34	492.2982633630801	982.5819737929602	2	492.2984313964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LIALVDRSP_	CON__P09870	21.9598887501803	0.5980208138527809	1				NaN	NaN	0	NaN	7046	5197	12244
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12246	37.386	NaN	785.63	30	0	233.81	0.106				-1	 	0	35	516.3015299341529	515.2942534675528	1	516.3016967773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7047	5197	12244
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12247	37.388	NaN	1753.5	30	0	198.01	0.038			+	-1	KIMMKMNWC	9	45	608.7717685088394	1215.5289840844787	2	608.7716674804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Oxidation (M)	_KIM(Oxidation (M))MKM(Oxidation (M))NWC_	REV__ADCY10|p.N1597Tfs*4|1|0.07|ENSG00000143199|chr1:167809721-167809721|T/-|frameshift_variant;REV__ADCY10|p.P1022Sfs*2|1|0.28|ENSG00000143199|chr1:167837262-167837263|-/A|frameshift_variant;REV__ENSG00000143199|ENST00000367851|ADCY10;REV__nc|ENSG00000143199|Q96PN6-2|ADCY10;REV__nc|ENSG00000143199|Q96PN6-4|ADCY10	21.9598887501803	0.5980208138527809	1				NaN	NaN	0	NaN	7048	5197	12244
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12251	37.403	NaN	1517.4	30	0	133.62	0.142	+			10870	FAVIGRSSL	9	49	475.27680345162634	948.5390539700527	2	475.2762451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FAVIGRSSL_	ENSG00000108846|ENST00000285238|ABCC3;ENST00000502426.5_1_17:48755439-48768558:+|nuORF;nc|ENSG00000108846|O15438-4|ABCC3	36.446750945000026	0.4619375763483977	1				NaN	NaN	0	NaN	7049	5200	12250
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12257	37.421	NaN	1103.6	30	0	156.52	0.214				-1	 	0	37	339.2151294236609	676.4157059141219	2	339.2150573730469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7052	5203	12256
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12258	37.424	NaN	1948.4	30	0	399.82	0.037				-1	KFDYYMPAI	9	54	582.2774405850258	1162.5403282368516	2	582.27783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_KFDYYM(Oxidation (M))PAI_	ENSG00000196839|ENST00000372874|ADA;ENST00000492931.5_1_20:43251503-43280248:-|nuORF;ENST00000545776.5_1_20:43255095-43280248:-|nuORF	35.61828744233558	0.47037581924408073	1				NaN	NaN	0	NaN	7053	5203	12256
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12265	37.455	NaN	2850.7	30	0	683.43	0.214	+			45426	TVYDRTTVL	9	60	534.290390017139	1066.5662271010779	2	534.2905883789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVYDRTTVL_	ENSG00000188786|ENST00000373036|MTF1;MTF1|p.F290Yfs*7|1|0.07|ENSG00000188786|chr1:37835200-37835201|-/GGTGTGT|frameshift_variant;MTF1|p.P462Lfs*83|1|0.39|ENSG00000188786|chr1:37822503-37822503|G/-|frameshift_variant;MTF1|p.T228Rfs*19|1|0.17|ENSG00000188786|chr1:37838722-37838722|T/-|frameshift_variant	39.252832667884924	0.4290233611298554	1				NaN	NaN	0	NaN	7054	5209	12264
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12266	37.458	NaN	1251.5	30	0	86.95	0.106	+			3389	ASQDIIPQLK	10	52	556.8196956288446	NaN	0	556.8743286132812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASQDIIPQLK_	ENSG00000093010|ENST00000361682|COMT;ENST00000207636.9_1_22:19951681-19956256:+|nuORF;nc|ENSG00000093010|P21964-2|COMT	38.753607047826485	0.3729281687199363	1				NaN	NaN	0	NaN	7055	5209	12264
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12267	37.46	NaN	1383.2	30	0	165.33	0.106	+			6946	CPHTIGVEF	9	61	530.2506520053379	NaN	0	530.25048828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_C(Carbamidomethyl (C))PHTIGVEF_	ENSG00000119396|ENST00000373840|RAB14	73.97473282117947	0.09202988758641674	1				NaN	NaN	0	NaN	7056	5209	12264
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12268	37.462	NaN	1382.9	30	0	274.82	0.106	+			36988	SIPAASAVKK	10	37	486.29770410398675	NaN	0	486.2975769042969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SIPAASAVKK_	POTEB3|p.M8I|1|0.12|ENSG00000278522|chr15:21439988-21439988|C/T|missense_variant	32.81241826257853	0.3924360933802784	1				NaN	NaN	0	NaN	7057	5209	12264
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12269	37.464	NaN	1732.4	30	0	288.46	0.035	+			43414	TGKISFKNL	9	34	336.53431636438376	NaN	0	336.5343933105469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TGKISFKNL_	ENSG00000147400|ENST00000370277|CETN2;ENSG00000177143|ENST00000327228|CETN1;ENST00000493482.1_1_X:151996387-151997293:-|nuORF	23.04248740728303	0.3589936788096251	1				NaN	NaN	0	NaN	7058	5209	12264
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12280	37.5	NaN	2372.7	30	0	304.35	0.144			+	38130	SPYGTALTTF	10	57	529.2640585080437	1056.5135640828873	2	529.2639770507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SPYGTALTTF_	REV__ENSG00000080854|ENST00000533871|IGSF9B;REV__nc|ENSG00000080854|Q9UPX0|IGSF9B	51.33545320467046	0.4446945571623749	1				NaN	NaN	0	NaN	7063	5215	12279
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12287	37.52	NaN	11857	30	0	1476.7	0.143	+			49952	VYVVGTAHF	9	67	496.76396170046485	991.5133704677297	2	496.76373291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYVVGTAHF_	ENSG00000170638|ENST00000380909|TRABD;ENST00000463233.1_1_22:50624392-50636456:+|nuORF;nc|ENSG00000170638|Q9H4I3-2|TRABD	148.20599733432147	0.007287282186870133	1				NaN	NaN	0	NaN	7067	5218	12286
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12291	37.536	NaN	1271.9	30	0	141.16	0.214			+	7678	DLEYNLKF	8	40	521.2660117740882	1040.5174706149762	2	521.2652587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DLEYNLKF_	REV__tr|U7STJ5|U7STJ5_FUSNUTyrrecombinasedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01507PE=3SV=1	21.9598887501803	0.7897753010812679	1				NaN	NaN	0	NaN	7068	5221	12290
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12292	37.54	NaN	1347.7	30	0	137.01	0.106	+			45827	VAKAVGKAIPE	11	51	541.8325426538901	NaN	0	541.8318481445312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VAKAVGKAIPE_	ENST00000520713.5_1_8:101563216-101563492:-|nuORF	28.383774762235813	0.43892155336841665	1				NaN	NaN	0	NaN	7069	5221	12290
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12293	37.541	NaN	1334.5	30	0	163.87	0.036				-1	PGCVALRARL	10	51	556.820068359375	NaN	0	556.820068359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_PGC(Carbamidomethyl (C))VALRARL_	ENST00000370220.1_1_10:102759899-102760451:+|nuORF	29.14955571784316	0.4044631218331212	1				NaN	NaN	0	NaN	7070	5221	12290
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12298	37.556	NaN	1580.1	30	0	189.57	0.144			+	32197	QSVGLKLDKI	10	57	550.8381046588702	NaN	0	550.8369750976562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QSVGLKLDKI_	REV__ENSG00000174405|ENST00000442234|LIG4;REV__LIG4|p.L462Ffs*12|1|0.14|ENSG00000174405|chr13:108209883-108209884|-/A|frameshift_variant	45.97224482568171	0.33106653400957564	1				NaN	NaN	0	NaN	7072	5224	12297
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12332	37.691	NaN	12748	30	0	1921.2	0.214	+			12143	GAIIHTVAL	9	63	447.7739558392738	893.5333587453476	2	447.77410888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GAIIHTVAL_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	110.33723246496265	0.028653888678955353	1				NaN	NaN	0	NaN	7082	5248	12331
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12333	37.694	NaN	1526.9	30	0	219.06	0.035			+	19167	IYRNTYTV	8	49	515.2717971438369	NaN	0	515.272216796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IYRNTYTV_	REV__ENSG00000087338|ENST00000282570|GMCL1	39.252832667884924	1.7418937515398478	1				NaN	NaN	0	NaN	7083	5248	12331
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12357	37.81	NaN	2038.1	30	0	328.51	0.214			+	48717	VTTSFRLLA	9	39	336.5342198953745	1006.5808302863236	3	336.53399658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTTSFRLLA_	REV__ENST00000508736.1_1_12:49994556-49994850:+|nuORF	13.775330524044264	0.6112419832031292	1				NaN	NaN	0	NaN	7086	5269	12356
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12358	37.814	NaN	4235.3	30	0	286.31	0.106	+			165	AAIVAYGLYK	10	66	534.8079243480984	1067.6012957629966	2	534.8081665039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAIVAYGLYK_	ENSG00000181061|ENST00000321331|HIGD1A;ENST00000470543.1_1_3:42826765-42845976:-|nuORF;nc|ENSG00000181061|Q9Y241-2|HIGD1A	90.77665401227738	0.12662738171778068	1				NaN	NaN	0	NaN	7087	5269	12356
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12359	37.815	NaN	3965.9	30	0	475.14	0.035			+	10931	FDPLSLKLN	9	59	523.7973098463725	1045.580066759545	2	523.7973022460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FDPLSLKLN_	REV__APOB|p.K4541Sfs*8|1|0.34|ENSG00000084674|chr2:21001800-21001800|T/-|frameshift_variant;REV__APOB|p.S3866Yfs*21|1|0.06|ENSG00000084674|chr2:21005271-21005272|-/TAAGAAAT|frameshift_variant;REV__ENSG00000084674|ENST00000233242|APOB	42.396135135203025	0.392153681582562	1				NaN	NaN	0	NaN	7088	5269	12356
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12363	37.83	NaN	1201	30	0	207.07	0.215			+	32267	QTLQPQSRR	9	43	557.3097906435225	NaN	0	557.3113403320312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QTLQPQSRR_	REV__ENSG00000166716|ENST00000560079|ZNF592	34.172542307311794	0.30503706118289736	1				NaN	NaN	0	NaN	7089	5272	12362
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12364	37.834	NaN	4933.7	30	0	485.86	0.036	+			31535	QLLCKGDYE	9	66	534.7543729492535	1067.4941929653069	2	534.7544555664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QLLCKGDYE_	ENSG00000136944|ENST00000373474|LMX1B;ENSG00000162761|ENST00000342310|LMX1A;LMX1A|p.S344Kfs*5|1|0.06|ENSG00000162761|chr1:165204000-165204001|-/TTTT|frameshift_variant;nc|ENSG00000136944|O60663-2|LMX1B;nc|ENSG00000136944|O60663-3|LMX1B	40.77816245573522	0.41113185337114944	1				NaN	NaN	0	NaN	7090	5272	12362
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12373	37.865	NaN	1088.2	30	0	168.57	0.214	+			47185	VLVKGYDKA	9	45	496.79213737002	991.56972180684	2	496.7929992675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VLVKGYDKA_	MRPS10|p.H83Y|1|0.35|ENSG00000048544|chr6:42211857-42211857|G/A|missense_variant	29.14955571784316	0.5308295550522326	1				NaN	NaN	0	NaN	7093	5278	12372
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12374	37.868	NaN	986.37	30	0	186.75	0.106	+			4200	ATFTNVFGK	9	43	492.76091306356307	NaN	0	492.76104736328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATFTNVFGK_	ENSG00000131503|ENST00000360839|ANKHD1;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	25.57405402267927	0.3484490411150625	1				NaN	NaN	0	NaN	7094	5278	12372
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12375	37.87	NaN	1773.9	30	0	240.45	0.038	+			49805	VYSRYFTTY	9	48	600.2904582388753	NaN	0	600.2894287109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	63.53385203322761	0.134247007536971	1				NaN	NaN	0	NaN	7095	5278	12372
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12380	37.885	NaN	1125.1	30	0	148.93	0.145	+			7795	DPHSQLYVY	9	53	561.2668037388341	1120.5190545444682	2	561.26708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DPHSQLYVY_	ENSG00000080031|ENST00000376350|PTPRH;ENST00000588559.5_1_19:55705613-55720813:-|nuORF;nc|ENSG00000080031|Q9HD43-2|PTPRH;nc|ENSG00000080031|Q9HD43-3|PTPRH	32.81241826257853	0.4965981579233955	1				NaN	NaN	0	NaN	7097	5281	12379
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12385	37.901	NaN	1103.8	30	0	90.923	0.143	+			46872	VILLPQPPK	9	53	502.8283538306518	NaN	0	502.82861328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VILLPQPPK_	AluSp_dup12528|chr4:108625371-108625684:-|1.1205789574276814|0.0295741133308953|5.24|467.0|19|3|anti-sense;ENST00000499522.6_1_8:104178449-104258641:-|nuORF;ENST00000573538.5_2_16:67974380-67976796:-|nuORF;ENST00000602743.1_1_17:13801940-13972716:-|nuORF;nc|ENSG00000050628|P43115-12|PTGER3	57.81127852772723	0.15865383123342353	1				NaN	NaN	0	NaN	7099	5284	12384
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12394	37.934	NaN	1482.3	30	0	315.59	0.142			+	8911	EEVHSHPL	8	48	474.23449464424857	946.4544363552972	2	474.23370361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EEVHSHPL_	REV__ENSG00000163520|ENST00000404922|FBLN2;REV__nc|ENSG00000163520|P98095|FBLN2	20.481830146152948	0.8005983782650069	1				NaN	NaN	0	NaN	7102	5290	12393
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12400	37.951	NaN	1212.5	30	0	170.69	0.214			+	10382	EVATLKLKL	9	49	507.83123032389574	1013.6479077145915	2	507.8310241699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EVATLKLKL_	REV__ENSG00000110841|ENST00000228425|PPFIBP1;REV__nc|ENSG00000110841|Q86W92-3|PPFIBP1;REV__nc|ENSG00000110841|Q86W92-4|PPFIBP1;REV__nc|ENSG00000110841|Q86W92|PPFIBP1;REV__PPFIBP1|p.A311Lfs*5|1|0.38|ENSG00000110841|chr12:27660904-27660904|A/-|frameshift_variant;REV__PPFIBP1|p.R282Kfs*16|1|0.05|ENSG00000110841|chr12:27656665-27656666|-/A|frameshift_variant	29.14955571784316	0.5308295550522326	1				NaN	NaN	0	NaN	7105	5293	12399
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12401	37.955	NaN	1847	30	0	244.25	0.106	+			42973	TEKELYEAL	9	62	548.2829994743161	NaN	0	548.2838745117188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEKELYEAL_	ENSG00000174607|ENST00000310836|UGT8	52.936696900407355	0.1864545979552969	1				NaN	NaN	0	NaN	7106	5293	12399
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12402	37.956	NaN	1609.3	30	0	257.86	0.037	+			14300	GSYDPQQIFK	10	58	591.7930967581117	1181.5716405830233	2	592.294677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GSYDPQQIFK_	ENSG00000131653|ENST00000326181|TRAF7;nc|ENSG00000131653|Q6Q0C0-2|TRAF7	42.86426827375447	0.522752283233888	1				NaN	NaN	0	NaN	7107	5293	12399
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12406	37.971	NaN	1783.1	30	0	806.19	0.141	+			44187	TQYSSAML	8	39	450.7089412981764	899.4033296631528	2	450.7071228027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TQYSSAML_	ENSG00000141279|ENST00000322157|NPEPPS;ENST00000530514.5_1_17:45668242-45699283:+|nuORF;ENST00000531486.1_1_17:45681241-45696545:+|nuORF;nc|ENSG00000141279|P55786-2|NPEPPS	27.882242232435846	0.7440473649773525	1				NaN	NaN	0	NaN	7108	5296	12405
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12414	38.002	NaN	2706.9	30	0	994.54	0.214	+			8105	DYKESFNTI	9	61	558.7638391069573	1115.5131252807146	2	558.7647094726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DYKESFNTI_	ENSG00000083307|ENST00000646743|GRHL2;ENSG00000134317|ENST00000324907|GRHL1;nc|ENSG00000083307|Q6ISB3-2|GRHL2;nc|ENSG00000134317|Q9NZI5-2|GRHL1;nc|ENSG00000134317|Q9NZI5-3|GRHL1	89.02883481214508	0.06760336634167786	1				NaN	NaN	0	NaN	7110	5302	12413
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12415	38.006	NaN	1571	30	0	191.2	0.035			+	37486	SLKQFLQQ	8	61	496.28178811150315	NaN	0	496.28173828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLKQFLQQ_	REV__ENSG00000219481|ENST00000430580|NBPF1;REV__ENSG00000219481|ENST00000430580|NBPF1;REV__nc|ENSG00000219481|Q3BBV0|NBPF1;REV__nc|ENSG00000219481|Q3BBV0|NBPF1	66.42927471994793	1.7418937515398478	1				NaN	NaN	0	NaN	7111	5302	12413
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12427	38.054	NaN	1562.1	30	0	188.23	0.143	+			48678	VTSYPSTKM	9	57	507.2520358744201	1012.4895188156402	2	507.252197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTSYPSTKM_	ENSG00000143493|ENST00000366994|INTS7;INTS7|p.F796Sfs*34|1|0.34|ENSG00000143493|chr1:211946635-211946635|A/-|frameshift_variant;nc|ENSG00000143493|Q9NVH2-2|INTS7;nc|ENSG00000143493|Q9NVH2-3|INTS7;nc|ENSG00000143493|Q9NVH2-4|INTS7	49.44154591367651	0.3095138337212152	1				NaN	NaN	0	NaN	7114	5311	12426
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12432	38.071	NaN	2378.3	30	0	318.7	0.143	+			4517	ATKKTKDSH	9	54	508.27898676327305	1014.5434205933461	2	508.2814025878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATKKTKDSH_	ENSG00000151687|ENST00000684021|ANKAR	52.936696900407355	0.27249468807391813	1				NaN	NaN	0	NaN	7116	5314	12431
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12437	38.087	NaN	3276.2	30	0	485.07	0.144	+			28099	NAFKEITTM	9	68	527.7655241148598	1053.5164952965195	2	528.2673950195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAFKEITTM_	ENSG00000137947|ENST00000370500|GTF2B;ENST00000486078.1_1_1:89325774-89329699:-|nuORF;ENST00000494819.5_1_1:89324456-89357188:-|nuORF	101.25262130126117	0.03792372629710479	1				NaN	NaN	0	NaN	7118	5317	12436
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12441	38.103	NaN	2406.2	30	0	279.46	0.144	+			50863	YFAERVTSL	9	61	543.2843807075445	1084.554208481889	2	543.2845458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YFAERVTSL_	ENSG00000213145|ENST00000392531|CRIP1	56.43379154798735	0.2433427591689151	1				NaN	NaN	0	NaN	7119	5320	12440
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12448	38.134	NaN	1267.8	30	0	420.62	0.214	+			33295	RGPPGLAGAPG	11	35	475.26469618410357	NaN	0	475.2651062011719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RGPPGLAGAPG_	COL3A1|p.G786Dfs*5|1|0.33|ENSG00000168542|chr2:189001549-189001549|C/-|frameshift_variant;COL3A1|p.N1405Sfs*4|1|0.06|ENSG00000168542|chr2:189010849-189010850|-/GTTCAGG|frameshift_variant;ENSG00000168542|ENST00000304636|COL3A1;nc|ENSG00000168542|P02461-2|COL3A1	16.473147378115264	0.456735970842152	1				NaN	NaN	0	NaN	7120	5326	12447
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12449	38.138	NaN	1817.8	30	0	192.05	0.034				-1	 	0	51	484.7739275457873	967.5333021583746	2	484.77435302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7121	5326	12447
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12454	38.153	NaN	1418.6	30	0	271.33	0.214			+	14744	GTKEKKIGF	9	37	336.53421964077154	1006.5808295225147	3	336.5341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTKEKKIGF_	REV__ENSG00000110844|ENST00000548825|PRPF40B;REV__nc|ENSG00000110844|Q6NWY9-2|PRPF40B;REV__nc|ENSG00000110844|Q6NWY9-3|PRPF40B;REV__nc|ENSG00000110844|Q6NWY9|PRPF40B	18.324413293986947	0.6112419832031293	1				NaN	NaN	0	NaN	7123	5329	12453
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12455	38.156	NaN	1981.5	30	0	345.27	0.037			+	-1	CVFIEMPTK	9	57	570.7743512946657	1139.5341496561314	2	570.7743530273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_C(Carbamidomethyl (C))VFIEM(Oxidation (M))PTK_	REV__CON__ENSEMBL:ENSBTAP00000018229;REV__CON__Q3MHN5	64.20726635412375	0.17854274437659667	1				NaN	NaN	0	NaN	7124	5329	12453
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12460	38.171	NaN	1745.9	30	0	320.69	0.142			+	38035	SPPLPRVY	8	45	464.76624948162515	927.5179460300503	2	464.7660217285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SPPLPRVY_	REV__ENSG00000175105|ENST00000636215|ZNF654	31.954861631926434	0.7126016770032289	1				NaN	NaN	0	NaN	7126	5332	12459
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12469	38.204	NaN	4074.9	30	0	776.37	0.144	+			12730	GEKVDFNTF	9	66	528.7537942758663	1055.4930356185325	2	528.7542114257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEKVDFNTF_	ENSG00000176153|ENST00000389614|GPX2;GPX2|p.W152*|1|0.31|ENSG00000176153|chr14:64939605-64939605|C/-|frameshift_variant	65.15724298150197	0.17062369902793603	1				NaN	NaN	0	NaN	7129	5338	12468
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12476	38.224	NaN	1243	30	0	113.31	0.144	+			49937	VYVQHPITF	9	57	552.2973895118729	1102.5802260905457	2	552.7988891601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYVQHPITF_	ENSG00000189067|ENST00000622633|LITAF;nc|ENSG00000189067|Q99732-2|LITAF;nc|ENSG00000189067|Q99732-3|LITAF	46.45678178249821	0.34452392205506005	1				NaN	NaN	0	NaN	7133	5341	12475
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12481	38.24	NaN	1936.4	30	0	354.97	0.143	+			49493	VVYVGGILTK	10	52	524.8236558756385	1047.6327588180768	2	524.8250732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVYVGGILTK_	ENSG00000174607|ENST00000310836|UGT8	52.936696900407355	0.4300801048568001	1				NaN	NaN	0	NaN	7135	5344	12480
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12486	38.257	NaN	2154.3	30	0	220.79	0.143	+			14776	GTLAEFIQK	9	60	503.7819522417199	1005.5493515502399	2	503.78216552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTLAEFIQK_	ENSG00000160602|ENST00000268766|NEK8;ENST00000584342.5_1_17:27052953-27062286:+|nuORF;ENST00000593261.1_1_17:27055855-27062286:+|nuORF	42.86426827375447	0.38666266728046506	1				NaN	NaN	0	NaN	7137	5347	12485
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12490	38.273	NaN	2054.4	30	0	185.23	0.144	+			15821	GVYSFQFNK	9	60	545.2716889719337	1088.5288250106673	2	545.7733764648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVYSFQFNK_	ENSG00000076067|ENST00000262031|RBMS2;ENST00000525031.2_1_12:94817522-94817669:-|nuORF	67.49366992349736	0.1516260258713357	1				NaN	NaN	0	NaN	7138	5350	12489
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12495	38.289	NaN	1658.5	30	0	131.81	0.214				-1	 	0	57	499.27470877230155	498.26743230570156	1	502.28302001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7140	5353	12494
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12496	38.292	NaN	1758.1	30	0	288.59	0.037			+	24361	LFNVADASRH	10	46	565.2886352539062	NaN	0	565.2886352539062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LFNVADASRH_	REV__tr|U7STQ4|U7STQ4_FUSNURhodanesedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01148PE=4SV=1	29.170058357718403	0.40439580130713204	1				NaN	NaN	0	NaN	7141	5353	12494
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12503	38.31	NaN	3310	30	0	299.62	0.214	+			11940	FVIETARQL	9	66	538.80875622295	1075.6029595127	2	539.31103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FVIETARQL_	ENSG00000119669|ENST00000238647|IRF2BPL;ENSG00000168264|ENST00000366609|IRF2BP2;IRF2BP2|p.K554Nfs*26|1|0.21|ENSG00000168264|chr1:234607239-234607239|T/-|frameshift_variant;IRF2BPL|p.G195Afs*17|1|0.33|ENSG00000119669|chr14:77027209-77027209|C/-|frameshift_variant;IRF2BPL|p.G244Vfs*101|1|0.32|ENSG00000119669|chr14:77027062-77027062|C/-|frameshift_variant;IRF2BPL|p.L713Sfs*54|1|0.54|ENSG00000119669|chr14:77025656-77025656|G/-|frameshift_variant;nc|ENSG00000168264|Q7Z5L9-2|IRF2BP2	91.26522074875469	0.06129826844580791	1				NaN	NaN	0	NaN	7145	5356	12502
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12504	38.314	NaN	2546.1	30	0	359.23	0.037			+	-1	LDKYAMYVM	9	60	575.269615441888	1148.524677950576	2	575.2691040039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LDKYAM(Oxidation (M))YVM_	REV__DPYSL3|p.A516Qfs*15|1|0.31|ENSG00000113657|chr5:147395638-147395638|G/-|frameshift_variant;REV__ENSG00000113657|ENST00000343218|DPYSL3;REV__nc|ENSG00000113657|Q14195|DPYSL3	29.14955571784316	0.5308295550522326	1				NaN	NaN	0	NaN	7146	5356	12502
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12508	38.328	NaN	2865.3	30	0	443.5	0.211				-1	 	0	67	749.0378552206939	2244.0917362622818	3	749.0369873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7147	5359	12507
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12509	38.331	NaN	1044.6	30	0	179.01	0.038				-1	PNASVIMQVPE	11	37	600.79931640625	NaN	0	600.79931640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_PNASVIM(Oxidation (M))QVPE_	ENSG00000168958|ENST00000304593|MFF;ENST00000436791.1_1_2:228195441-228210989:+|nuORF;nc|ENSG00000168958|Q9GZY8-3|MFF;nc|ENSG00000168958|Q9GZY8-4|MFF;nc|ENSG00000168958|Q9GZY8-5|MFF;nc|ENSG00000168958|Q9GZY8|MFF	18.262085536374414	0.456735970842152	1				NaN	NaN	0	NaN	7148	5359	12507
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12513	38.345	NaN	1868.4	30	0	704.01	0.142			+	21239	KLITETKL	8	40	473.30265259329093	944.5907522533819	2	473.3023986816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KLITETKL_	REV__ENSG00000130558|ENST00000371793|OLFM1;REV__nc|ENSG00000130558|Q99784-3|OLFM1;REV__nc|ENSG00000130558|Q99784-5|OLFM1;REV__OLFM1|p.R334H|1|0.09|ENSG00000130558|chr9:135119721-135119721|G/A|missense_variant	23.04248740728303	0.7814162927298575	1				NaN	NaN	0	NaN	7149	5362	12512
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12528	38.41	NaN	2730.4	30	0	331.56	0.144	+			26971	LYLDEAHSI	9	56	530.7691759303292	1059.5237989274583	2	530.768798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LYLDEAHSI_	ENSG00000100596|ENST00000216484|SPTLC2	55.50420428727701	0.2510918378945873	1				NaN	NaN	0	NaN	7152	5374	12527
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12537	38.445	NaN	1364.4	30	0	257.29	0.143			+	-1	GKLLLYCI	8	40	490.2856090534274	NaN	0	490.22369384765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GKLLLYC(Carbamidomethyl (C))I_	REV__ENST00000609898.1_1_10:45454636-45454795:-|nuORF	20.481830146152948	1.741893751539848	1				NaN	NaN	0	NaN	7155	5380	12536
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12541	38.461	NaN	1466.5	30	0	178.56	0.214	+			29429	PCERTDIR	8	52	495.24547991091805	988.4764068886361	2	495.24542236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PCERTDIR_	ANK3|p.K4140Nfs*15|2|0.27|ENSG00000151150|chr10:60064188-60064188|T/-|frameshift_variant;ANK3|p.S4352Vfs*2|1|0.51|ENSG00000151150|chr10:60055669-60055670|-/C|frameshift_variant;ANK3|p.W4141Mfs*12|1|0.36|ENSG00000151150|chr10:60064187-60064188|-/T|frameshift_variant;ENSG00000151150|ENST00000280772|ANK3;nc|ENSG00000151150|Q12955-4|ANK3;nc|ENSG00000151150|Q12955-5|ANK3;nc|ENSG00000151150|Q12955-6|ANK3;nc|ENSG00000151150|Q12955-7|ANK3	29.14955571784316	0.7342621283720113	1				NaN	NaN	0	NaN	7156	5383	12540
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12542	38.464	NaN	3047.5	30	0	217.31	0.106				-1	 	0	74	749.0378552206939	2244.0917362622818	3	749.3711547851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7157	5383	12540
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12543	38.466	NaN	1783.6	30	0	402.27	0.039			+	29025	NSSLCQYIIQI	11	50	641.3294140164471	NaN	0	641.3282470703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NSSLCQYIIQI_	REV__nc|ENSG00000253309|A8MV23|SERPINE3	26.063383197487333	0.44926255568796863	1				NaN	NaN	0	NaN	7158	5383	12540
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12547	38.48	NaN	1388.2	30	0	216.09	0.214				-1	 	0	43	484.7739275457873	967.5333021583746	2	484.77362060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7159	5386	12546
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12548	38.484	NaN	1350.5	30	0	49.765	0.044			+	-1	QYRECWRKQWL	11	58	826.9122027010899	1651.8098524689797	2	826.9103393554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_QYREC(Carbamidomethyl (C))WRKQWL_	REV__ENST00000526535.1_1_11:111234037-111249995:-|nuORF	2.92943323627438	0.8718097890272747	1				NaN	NaN	0	NaN	7160	5386	12546
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12552	38.498	NaN	3110.6	30	0	836.27	0.213	+			6498	AWRQFLRSAQ	10	64	631.8401549766526	1261.665757020105	2	631.8409423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AWRQFLRSAQ_	ENST00000381007.8_1_5:65008834-65017846:-|nuORF	23.52269567125451	0.6877354443478558	1				NaN	NaN	0	NaN	7161	5389	12551
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12553	38.502	NaN	1488.2	30	0	229.96	0.106	+			45504	TYFDKNYNL	9	56	589.2804306336516	NaN	0	589.2798461914062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TYFDKNYNL_	ENSG00000116641|ENST00000635253|DOCK7;ENST00000467758.1_1_1:62941350-62941566:-|nuORF;nc|ENSG00000116641|Q96N67-2|DOCK7;nc|ENSG00000116641|Q96N67-3|DOCK7;nc|ENSG00000116641|Q96N67-4|DOCK7;nc|ENSG00000116641|Q96N67-5|DOCK7;nc|ENSG00000116641|Q96N67-6|DOCK7	39.252832667884924	0.27938773122138094	1				NaN	NaN	0	NaN	7162	5389	12551
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12554	38.504	NaN	1048.4	30	0	110.08	0.038				-1	ISCLIQKGKY	10	44	605.3379948997621	NaN	0	605.33642578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_ISC(Carbamidomethyl (C))LIQKGKY_	nc|ENSG00000164197|Q86T96-3|RNF180	14.864876125193954	0.4201028297492154	1				NaN	NaN	0	NaN	7163	5389	12551
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12559	38.518	NaN	1716.9	30	0	312.13	0.214	+			13851	GQVVHLLLE	9	36	336.53421964077154	1006.5808295225147	3	336.5342712402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GQVVHLLLE_	ENSG00000163629|ENST00000411767|PTPN13;nc|ENSG00000163629|Q12923-2|PTPN13;nc|ENSG00000163629|Q12923-3|PTPN13;nc|ENSG00000163629|Q12923-4|PTPN13;PTPN13|p.K1535Sfs*16|1|0.38|ENSG00000163629|chr4:86769879-86769879|A/-|frameshift_variant;PTPN13|p.T2330Qfs*13|1|0.12|ENSG00000163629|chr4:86807799-86807799|A/-|frameshift_variant	18.324413293986947	0.6112419832031293	1				NaN	NaN	0	NaN	7165	5392	12558
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12560	38.522	NaN	1096.7	30	0	193.66	0.035			+	40967	SVGELHNIL	9	35	491.2718392495025	980.529125565805	2	491.27227783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVGELHNIL_	REV__ENSG00000206113|ENST00000635017|CFAP99	31.529811441608018	0.5085848003137583	1				NaN	NaN	0	NaN	7166	5392	12558
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12569	38.554	NaN	2133.9	30	0	1085.1	0.14	+			46012	VAVLLGGLA	9	37	406.7656409281866	811.5167289231732	2	406.7655334472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VAVLLGGLA_	ENSG00000103044|ENST00000569188|HAS3	49.21078951299608	0.3122205139198386	1				NaN	NaN	0	NaN	7169	5398	12568
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12575	38.572	NaN	863.46	30	0	169.3	0.143	+			28954	NSDPNLHLL	9	47	511.76749757065375	1021.5204422081075	2	511.76812744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NSDPNLHLL_	ENSG00000136830|ENST00000373312|NIBAN2;nc|ENSG00000136830|Q96TA1-2|NIBAN2	51.19269402634007	0.2889735674168909	1				NaN	NaN	0	NaN	7172	5401	12574
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12580	38.588	NaN	2320.9	30	0	334.37	0.144	+			17613	IEHGIITNW	9	62	541.7849630596588	1081.5553731861175	2	541.7861938476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IEHGIITNW_	ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENST00000473016.1_1_2:74120109-74129648:+|nuORF;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000488967.5_1_10:90706975-90712518:-|nuORF	58.78195531508484	0.22376836668196862	1				NaN	NaN	0	NaN	7174	5404	12579
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12584	38.605	NaN	1153	30	0	132.37	0.143	+			6592	AYLSKAMEI	9	46	513.2707685207146	NaN	0	513.2709350585938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AYLSKAMEI_	ENSG00000124784|ENST00000379834|RIOK1;RIOK1|p.E533Rfs*20|1|0.19|ENSG00000124784|chr6:7414384-7414385|-/A|frameshift_variant	47.657333605630114	0.2228375344433429	1				NaN	NaN	0	NaN	7175	5407	12583
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12588	38.621	NaN	1231.7	30	0	239.25	0.144			+	36025	SEILKLQIR	9	40	550.343741525396	NaN	0	550.3430786132812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEILKLQIR_	REV__ENSG00000104133|ENST00000261866|SPG11;REV__ENST00000561268.5_1_15:44859616-44864898:-|nuORF;REV__nc|ENSG00000104133|Q96JI7-3|SPG11	30.503639358989545	0.3235605894931338	1				NaN	NaN	0	NaN	7176	5410	12587
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12592	38.637	NaN	6656.8	30	0	2078	0.144	+			30953	QENNLLKTL	9	70	536.8035218580957	1071.5924907829913	2	536.8037719726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QENNLLKTL_	ENSG00000102804|ENST00000458659|TSC22D1;ENST00000496314.1_1_13:45008764-45009186:-|nuORF;nc|ENSG00000102804|Q15714-2|TSC22D1;nc|ENSG00000102804|Q15714-3|TSC22D1;nc|ENSG00000102804|Q15714-5|TSC22D1	77.53327743719008	0.1082147015697554	1				NaN	NaN	0	NaN	7177	5413	12591
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12598	38.655	NaN	1722.9	30	0	165.24	0.144	+			9616	ELNYGLAQF	9	52	527.7638696235135	1053.513186313827	2	527.7637329101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ELNYGLAQF_	ENSG00000147130|ENST00000314425|ZMYM3;ENST00000470832.1_1_X:70463642-70464308:-|nuORF;nc|ENSG00000147130|Q14202-2|ZMYM3	47.657333605630114	0.33044192980041115	1				NaN	NaN	0	NaN	7180	5416	12597
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12602	38.671	NaN	1131	30	0	139.08	0.143			+	25814	LSDALTQKL	9	48	494.78680803835204	987.5590631435041	2	494.7878112792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSDALTQKL_	REV__ENST00000558838.1_1_15:101845315-101845453:+|nuORF	56.72105179125745	0.24094814563026265	1				NaN	NaN	0	NaN	7181	5419	12601
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12614	38.709	NaN	2121.6	30	0	323.31	0.214	+			18540	ISMDLQLTNK	10	72	581.8106702183164	1161.6067875034328	2	581.810791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ISMDLQLTNK_	ENSG00000100280|ENST00000357586|AP1B1;ENST00000472057.1_1_22:29727525-29736761:-|nuORF;nc|ENSG00000100280|Q10567-2|AP1B1;nc|ENSG00000100280|Q10567-3|AP1B1;nc|ENSG00000100280|Q10567-4|AP1B1	48.601550744091256	0.46988609897316763	1				NaN	NaN	0	NaN	7187	5425	12613
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12615	38.712	NaN	1493.7	30	0	153.21	0.106	+			46191	VDWQIRQV	8	49	522.2849026678603	1042.5552524025204	2	522.2843627929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VDWQIRQV_	ENSG00000126522|ENST00000304874|ASL;nc|ENSG00000126522|P04424-2|ASL;nc|ENSG00000126522|P04424-3|ASL	47.657333605630114	0.6087971902037268	1				NaN	NaN	0	NaN	7188	5425	12613
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12616	38.714	NaN	1096.6	30	0	182.02	0.106				-1	SRMEIKEI	8	45	511.2694091796875	NaN	0	511.2694091796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_SRM(Oxidation (M))EIKEI_	ENSG00000136895|ENST00000373387|GARNL3;ENST00000481242.5_1_9:130127572-130155530:+|nuORF;ENST00000496711.5_1_9:130126995-130155530:+|nuORF;nc|ENSG00000136895|Q5VVW2-4|GARNL3;nc|ENSG00000136895|Q5VVW2-5|GARNL3	40.05817265558897	1.7418937515398478	1				NaN	NaN	0	NaN	7189	5425	12613
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12617	38.716	NaN	493.78	30	0	84.092	0.035			+	15722	GVRNKLRH	8	26	327.201262109071	NaN	0	327.201171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GVRNKLRH_	REV__ENST00000319406.8_1_2:30670199-30682472:+|nuORF	7.193352174278301	1.7418937515398478	1				NaN	NaN	0	NaN	7190	5425	12613
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12621	38.73	NaN	1231.2	30	0	221.46	0.215	+			28855	NPVHALVL	8	40	431.76053071732315	NaN	0	431.7608642578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NPVHALVL_	ENST00000420027.3_1_20:48698052-48698115:-|nuORF	39.021493756699265	1.7418937515398478	1				NaN	NaN	0	NaN	7191	5428	12620
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12622	38.734	NaN	1290.9	30	0	191.08	0.037				-1	CEFAFNMKK	9	54	567.2590097920514	1132.5034666509027	2	567.2603759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_CEFAFNM(Oxidation (M))KK_	ENSG00000166949|ENST00000327367|SMAD3;nc|ENSG00000166949|P84022-2|SMAD3;nc|ENSG00000166949|P84022-3|SMAD3;SMAD3|p.L153Tfs*13|1|0.33|ENSG00000166949|chr15:67165301-67165302|-/C|frameshift_variant;SMAD3|p.P152Hfs*34|1|0.11|ENSG00000166949|chr15:67165302-67165302|C/-|frameshift_variant;SMAD3|p.V331Rfs*31|1|0.42|ENSG00000166949|chr15:67184843-67184844|-/C|frameshift_variant	35.61828744233558	0.47037581924408073	1				NaN	NaN	0	NaN	7192	5428	12620
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12629	38.764	NaN	2106.1	30	0	148.72	0.145	+			7159	DAFKSGIVQY	10	61	564.289650691742	1126.564748450284	2	564.2898559570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DAFKSGIVQY_	ENSG00000164307|ENST00000443439|ERAP1;ENST00000507859.1_1_5:96121490-96126328:-|nuORF;ERAP1|p.T584Qfs*21|1|0.21|ENSG00000164307|chr5:96786479-96786479|T/-|frameshift_variant;ERAP1|p.T768Nfs*53|1|0.2|ENSG00000164307|chr5:96781837-96781838|-/GAAAT|frameshift_variant;nc|ENSG00000164307|Q9NZ08-2|ERAP1	81.52500206392136	0.18316182710238588	1				NaN	NaN	0	NaN	7193	5434	12628
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12633	38.78	NaN	1086.1	30	0	178.04	0.144			+	-1	SRIPCSARR	9	49	551.7977266613738	1101.5809003895474	2	551.7977905273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SRIPC(Carbamidomethyl (C))SARR_	REV__ENST00000221980.4_1_19:10403354-10403878:+|nuORF	37.81151784470057	0.4459294069877048	1				NaN	NaN	0	NaN	7194	5437	12632
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12638	38.797	NaN	1909	30	0	222.64	0.145			+	46390	VELKVEQPAP	10	51	555.3132571773303	1108.6119614214606	2	555.314208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VELKVEQPAP_	REV__TNRC6B|p.L546Sfs*63|1|0.35|ENSG00000100354|chr22:40265862-40265862|C/-|frameshift_variant	36.446750945000026	0.5818864909973037	1				NaN	NaN	0	NaN	7196	5440	12637
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12643	38.813	NaN	1053	30	0	237.43	0.143			+	23540	LAKDNEGLAL	10	44	522.2899285068979	NaN	0	522.2896728515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LAKDNEGLAL_	REV__ADCY10|p.N1597Tfs*4|1|0.07|ENSG00000143199|chr1:167809721-167809721|T/-|frameshift_variant;REV__ENSG00000143199|ENST00000367851|ADCY10;REV__nc|ENSG00000143199|Q96PN6-2|ADCY10;REV__nc|ENSG00000143199|Q96PN6-4|ADCY10	37.81151784470057	0.3760215235790741	1				NaN	NaN	0	NaN	7198	5443	12642
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12653	38.861	NaN	1712.7	30	0	443.09	0.143	+			45005	TVEKYRVL	8	35	336.53426870131307	NaN	0	336.5343933105469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVEKYRVL_	GGNBP2|p.V346Yfs*20|2|0.22|ENSG00000278311|chr17:36581354-36581354|A/-|frameshift_variant	28.2542754592877	1.7418937515398478	1				NaN	NaN	0	NaN	7199	5452	12652
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12665	38.899	NaN	2662.4	30	0	412.7	0.214	+			42063	SYANVQDGF	9	52	500.72202629058813	999.4294996479763	2	500.7220764160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SYANVQDGF_	ENSG00000152766|ENST00000371930|ANKRD22	117.81106730687013	0.02252488733980868	1				NaN	NaN	0	NaN	7205	5458	12664
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12666	38.903	NaN	977.38	30	0	96.854	0.035			+	-1	LAEEMPDGM	9	48	512.7014759612415	NaN	0	512.70166015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Oxidation (M)	_LAEEM(Oxidation (M))PDGM(Oxidation (M))_	REV__ENSG00000092853|ENST00000318121|CLSPN;REV__nc|ENSG00000092853|Q9HAW4-2|CLSPN;REV__nc|ENSG00000092853|Q9HAW4-3|CLSPN	38.80614096846853	0.28164298475537564	1				NaN	NaN	0	NaN	7206	5458	12664
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12672	38.919	NaN	1462.1	30	0	263.2	0.144			+	10914	FDIIRYKGG	9	52	534.79527366705	1067.5759944008998	2	534.7954711914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FDIIRYKGG_	REV__tr|U7STN9|U7STN9_FUSNUGlucose-1-phosphateadenylyltransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=glgCPE=3SV=1	42.396135135203025	0.392153681582562	1				NaN	NaN	0	NaN	7209	5461	12671
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12686	38.984	NaN	2024.5	30	0	305.98	0.144	+			18684	ITAVTVNQSL	10	43	523.2977360927997	NaN	0	523.2976684570312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ITAVTVNQSL_	CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000425226.1_1_2:203706028-203706388:-|nuORF;ENST00000550170.5_1_12:53294858-53298765:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	37.50817390946774	0.3770175549877019	1				NaN	NaN	0	NaN	7211	5473	12685
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12690	39	NaN	1591.1	30	0	214.92	0.145			+	-1	MRKIKKEPYR	10	59	682.8968836134302	NaN	0	682.8975830078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))RKIKKEPYR_	REV__MAGI3|p.S1353Y|1|0.12|ENSG00000081026|chr1:113683626-113683626|C/A|missense_variant	20.94693142431847	0.4201028297492154	1				NaN	NaN	0	NaN	7212	5476	12689
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12695	39.016	NaN	2795.4	30	0	540.02	0.145				-1	FGESIEDLHTC	11	54	654.2828784414932	1306.5512039497862	2	654.2833251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_FGESIEDLHTC(Carbamidomethyl (C))_	ENSG00000163964|ENST00000392391|PIGX;nc|ENSG00000163964|Q8TBF5-2|PIGX	14.137123925751023	0.8042936413770803	1				NaN	NaN	0	NaN	7214	5479	12694
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12699	39.033	NaN	1990.1	30	0	197.66	0.214	+			49941	VYVQNVVKL	9	62	531.3215718387846	1060.6285907443691	2	531.3218383789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYVQNVVKL_	AP3D1|p.A531T|1|0.3|ENSG00000065000|chr19:2118723-2118723|C/T|missense_variant;ENSG00000065000|ENST00000643116|AP3D1;nc|ENSG00000065000|O14617-2|AP3D1;nc|ENSG00000065000|O14617-3|AP3D1;nc|ENSG00000065000|O14617-4|AP3D1;nc|ENSG00000065000|O14617|AP3D1	82.30502934623384	0.08758161712619916	1				NaN	NaN	0	NaN	7215	5482	12698
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12700	39.036	NaN	1448.2	30	0	216.96	0.106			+	-1	RRGRVAGSM	9	44	503.2715567784143	1004.5285606236287	2	503.2720947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_RRGRVAGSM(Oxidation (M))_	REV__nc|ENSG00000165006|Q9NZ09-3|UBAP1;REV__nc|ENSG00000165006|Q9NZ09-4|UBAP1	37.15910966729921	0.4535818937225704	1				NaN	NaN	0	NaN	7216	5482	12698
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12701	39.038	NaN	1812	30	0	74.491	0.044			+	-1	RMWCSRSRRRW	11	70	826.9126586914062	NaN	0	826.9126586914062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_RM(Oxidation (M))WC(Carbamidomethyl (C))SRSRRRW_	REV__ENST00000262305.8_2_16:569007-569781:+|nuORF	19.262678746197807	0.456735970842152	1				NaN	NaN	0	NaN	7217	5482	12698
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12711	39.071	NaN	928.27	30	0	522.44	0.141	+			46698	VGLGAYRC	8	25	419.71594819883614	NaN	0	419.7160949707031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VGLGAYRC_	ENST00000568546.5_3_16:2029772-2030570:+|nuORF	14.664097394203935	1.7418937515398478	1				NaN	NaN	0	NaN	7221	5488	12710
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12717	39.088	NaN	3985.4	30	0	667.06	0.214	+			45613	TYQDIQNTI	9	53	548.2691086831303	1094.5236644330605	2	548.2694091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TYQDIQNTI_	ENSG00000181222|ENST00000674977|POLR2A;nc|ENSG00000181222|P24928|POLR2A	101.25262130126117	0.03792372629710479	1				NaN	NaN	0	NaN	7224	5491	12716
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12718	39.092	NaN	1010.2	30	0	107.77	0.033	+			28253	NDIVVKVL	8	40	450.28155416685746	898.5485554005149	2	450.2810974121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NDIVVKVL_	ENSG00000166333|ENST00000299421|ILK;nc|ENSG00000166333|Q13418-2|ILK;nc|ENSG00000166333|Q13418-3|ILK	77.31757898189308	0.345924878368729	1				NaN	NaN	0	NaN	7225	5491	12716
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12731	39.153	NaN	2237.9	30	0	191.58	0.144			+	29045	NTDAENQAKE	10	62	560.2488127375431	1118.483072541886	2	560.2476196289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NTDAENQAKE_	REV__CATSPER1|p.S275Vfs*60|1|0.12|ENSG00000175294|chr11:66025558-66025558|G/-|frameshift_variant;REV__ENSG00000175294|ENST00000312106|CATSPER1	36.31764250033197	0.5830761606467809	1				NaN	NaN	0	NaN	7226	5503	12730
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12736	39.169	NaN	1322.6	30	0	131.57	0.143	+			33667	RNIVSELTI	9	50	522.8064575195312	NaN	0	522.8064575195312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RNIVSELTI_	ENSG00000163491|ENST00000691995|NEK10;nc|ENSG00000163491|Q6ZWH5-2|NEK10;nc|ENSG00000163491|Q6ZWH5-4|NEK10;nc|ENSG00000163491|Q6ZWH5|NEK10	40.77816245573522	0.2702456086868081	1				NaN	NaN	0	NaN	7228	5506	12735
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12746	39.204	NaN	2211.7	30	0	462.04	0.214	+			12073	GAAGVHFIY	9	51	467.7425942958885	933.4706356585771	2	467.74273681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GAAGVHFIY_	ENSG00000169813|ENST00000682386|HNRNPF	60.403631409065575	0.21025000616765316	1				NaN	NaN	0	NaN	7232	5512	12745
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12747	39.208	NaN	2613.5	30	0	449.97	0.106	+			28992	NSMGLFLQK	9	62	519.2760826844757	1036.5376124357513	2	519.7777099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NSMGLFLQK_	ENSG00000079459|ENST00000220584|FDFT1;ENST00000446331.6_1_8:11660331-11696115:+|nuORF;FDFT1|p.N215S|1|0.21|ENSG00000079459|chr8:11826157-11826157|A/G|missense_variant;nc|ENSG00000079459|P37268-2|FDFT1;nc|ENSG00000079459|P37268-3|FDFT1;nc|ENSG00000079459|P37268-4|FDFT1;nc|ENSG00000079459|P37268-5|FDFT1	68.84614121027924	0.14577793175421136	1				NaN	NaN	0	NaN	7233	5512	12745
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12748	39.21	NaN	1219.4	30	0	241.91	0.035			+	43473	TGPALHTIVV	10	29	336.53424638094896	1006.580909743047	3	336.53472900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TGPALHTIVV_	REV__ENSG00000153048|ENST00000311052|CARHSP1	16.473147378115264	0.7327422906225664	1				NaN	NaN	0	NaN	7234	5512	12745
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12755	39.24	NaN	2326.8	30	0	190.13	0.143	+			21612	KPNGLILQY	9	58	523.305674879657	1044.5967968261139	2	523.3071899414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KPNGLILQY_	ENSG00000013375|ENST00000513973|PGM3;ENST00000515333.1_1_6:83900509-83900731:-|nuORF;nc|ENSG00000013375|O95394-3|PGM3;nc|ENSG00000013375|O95394-4|PGM3	37.15910966729921	0.4535818937225704	1				NaN	NaN	0	NaN	7235	5518	12754
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12759	39.256	NaN	1665.7	30	0	249.36	0.144	+			20284	KENSLITQF	9	57	540.2892114706791	1078.5638700081581	2	540.2908935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KENSLITQF_	ENSG00000102699|ENST00000381989|PARP4	51.52775601994872	0.28504342437107444	1				NaN	NaN	0	NaN	7236	5521	12758
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12770	39.304	NaN	2738.4	30	0	524.57	0.214	+			2397	ANVKNIGAL	9	34	450.2688213773953	898.5230898215906	2	450.2686767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ANVKNIGAL_	nc|ENSG00000215695|Q92681|RSC1A1	33.51558372728122	0.4900267029546261	1				NaN	NaN	0	NaN	7238	5530	12769
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12771	39.308	NaN	1487.1	30	0	164.33	0.106	+			24703	LHGADVVF	8	47	429.23081877223325	NaN	0	429.2296447753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LHGADVVF_	ENSG00000148600|ENST00000623527|CDHR1;nc|ENSG00000148600|Q96JP9-2|CDHR1	33.51558372728122	1.7418937515398478	1				NaN	NaN	0	NaN	7239	5530	12769
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12772	39.31	NaN	3106.1	30	0	215.17	0.036	+			42190	TAADIFKQY	9	63	528.771771148211	1055.5289893632219	2	528.7723999023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TAADIFKQY_	ENSG00000101972|ENST00000371145|STAG2;nc|ENSG00000101972|Q8N3U4|STAG2;STAG2|p.T1208Kfs*3|1|0.87|ENSG00000101972|chrX:124095400-124095400|C/-|frameshift_variant	101.25262130126117	0.03792372629710479	1				NaN	NaN	0	NaN	7240	5530	12769
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12778	39.326	NaN	1843.3	30	0	444.46	0.143	+			4701	ATLTNILEH	9	54	506.2770273226068	1010.5395017120136	2	506.2765197753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATLTNILEH_	ENSG00000140853|ENST00000688547|NLRC5;nc|ENSG00000140853|Q86WI3-2|NLRC5;nc|ENSG00000140853|Q86WI3-3|NLRC5;nc|ENSG00000140853|Q86WI3-4|NLRC5;nc|ENSG00000140853|Q86WI3-5|NLRC5;nc|ENSG00000140853|Q86WI3-6|NLRC5;NLRC5|p.E662D|1|0.4|ENSG00000140853|chr16:57026929-57026929|G/T|missense_variant;NLRC5|p.H1717Ifs*29|2|0.41|ENSG00000140853|chr16:57079112-57079112|C/-|frameshift_variant;NLRC5|p.P816Rfs*30|1|0.28|ENSG00000140853|chr16:57031430-57031430|C/-|frameshift_variant	63.53385203322761	0.18415635464017938	1				NaN	NaN	0	NaN	7243	5533	12777
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12782	39.342	NaN	1219.9	30	0	280.82	0.214	+			11162	FGPGPGSNF	9	36	440.20334045830566	878.3921279834113	2	440.2032775878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FGPGPGSNF_	ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;ENST00000495810.1_1_7:26235422-26236427:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1	47.657333605630114	0.33044192980041115	1				NaN	NaN	0	NaN	7244	5536	12781
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12783	39.345	NaN	684.23	30	0	133.27	0.033			+	46795	VHPSHGLF	8	25	447.2335115521876	NaN	0	447.2332458496094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VHPSHGLF_	REV__ENSG00000165521|ENST00000554922|EML5;REV__nc|ENSG00000165521|Q05BV3|EML5	15.63621529709179	1.7418937515398478	1				NaN	NaN	0	NaN	7245	5536	12781
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12788	39.36	NaN	1059.6	30	0	162.48	0.139				-1	 	0	30	349.26461853477593	696.5146841363519	2	349.2649230957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7247	5539	12787
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12792	39.376	NaN	1094.6	30	0	91.858	0.214	+			45661	TYVSGTLRF	9	49	522.2795548192337	1042.5445567052673	2	522.2802124023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TYVSGTLRF_	ENSG00000134255|ENST00000357172|CEPT1	49.536043120802724	0.308405419312776	1				NaN	NaN	0	NaN	7248	5542	12791
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12793	39.38	NaN	1382.4	30	0	194.04	0.037				-1	YEKGCEFVL	9	48	572.7700542374392	1143.5255555416784	2	572.7701416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_YEKGC(Carbamidomethyl (C))EFVL_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	32.81241826257853	0.4965981579233955	1				NaN	NaN	0	NaN	7249	5542	12791
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12797	39.394	NaN	1696.6	30	0	195.19	0.145			+	21881	KRPLKESHAIW	11	66	682.8960241006101	1363.7774952680202	2	682.8970336914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KRPLKESHAIW_	REV__ENSG00000165698|ENST00000356311|SPACA9;REV__nc|ENSG00000165698|Q96E40-2|SPACA9	28.081489160057373	0.6952392775027776	1				NaN	NaN	0	NaN	7250	5545	12796
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12804	39.426	NaN	1698.1	30	0	161.9	0.214	+			36334	SESSLALRL	9	54	488.2768567172495	974.539160501299	2	488.27630615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SESSLALRL_	DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;nc|ENSG00000187908|Q9UGM3-2|DMBT1;nc|ENSG00000187908|Q9UGM3-2|DMBT1;nc|ENSG00000187908|Q9UGM3-2|DMBT1;nc|ENSG00000187908|Q9UGM3-2|DMBT1;nc|ENSG00000187908|Q9UGM3-2|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-4|DMBT1;nc|ENSG00000187908|Q9UGM3-4|DMBT1;nc|ENSG00000187908|Q9UGM3-4|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-8|DMBT1;nc|ENSG00000187908|Q9UGM3-8|DMBT1;nc|ENSG00000187908|Q9UGM3-8|DMBT1;nc|ENSG00000187908|Q9UGM3-8|DMBT1;nc|ENSG00000187908|Q9UGM3-9|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1	52.936696900407355	0.27249468807391813	1				NaN	NaN	0	NaN	7251	5551	12803
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12805	39.429	NaN	2567.3	30	0	390.05	0.037	+			39660	STIFYYVQK	9	57	574.8026360127634	1147.5907190923267	2	574.8021240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STIFYYVQK_	ENSG00000092148|ENST00000399332|HECTD1;HECTD1|p.F2271Lfs*13|1|0.16|ENSG00000092148|chr14:31107059-31107059|A/-|frameshift_variant;HECTD1|p.I2041Lfs*27|1|0.36|ENSG00000092148|chr14:31113133-31113133|T/-|frameshift_variant	74.25504064058377	0.12238981753128622	1				NaN	NaN	0	NaN	7252	5551	12803
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12812	39.46	NaN	1716.9	30	0	422.38	0.144				-1	CVGCGRCDD	9	52	549.6916350717936	1097.368717210387	2	549.6926879882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	3 Carbamidomethyl (C)	_C(Carbamidomethyl (C))VGC(Carbamidomethyl (C))GRC(Carbamidomethyl (C))DD_	tr|U7SUY9|U7SUY9_FUSNUSulfitereductase,subunitAOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01057PE=4SV=1	23.04248740728303	0.5879033540491928	1				NaN	NaN	0	NaN	7253	5557	12811
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12816	39.476	NaN	1332	30	0	408.63	0.138				-1	 	0	32	339.22081658878477	676.4270802443696	2	339.22088623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7254	5560	12815
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12825	39.51	NaN	1943.5	30	0	240.83	0.144	+			39799	STLDIVLANK	10	62	537.3136547911203	1072.6127566490404	2	537.3148193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STLDIVLANK_	ENSG00000167325|ENST00000300738|RRM1	90.14881205920913	0.1302219035121668	1				NaN	NaN	0	NaN	7257	5566	12824
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12829	39.526	NaN	1922.2	30	0	231.91	0.214	+			36613	SGFEGMFTK	9	50	502.23124493198645	1002.4479369307729	2	502.23077392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SGFEGMFTK_	ENSG00000153201|ENST00000283195|RANBP2;ENSG00000153201|ENST00000283195|RANBP2;ENSG00000153201|ENST00000283195|RANBP2;RANBP2|p.C2737Vfs*35|1|0.18|ENSG00000153201|chr2:108772957-108772957|T/-|frameshift_variant;RANBP2|p.C2737Vfs*35|1|0.18|ENSG00000153201|chr2:108772957-108772957|T/-|frameshift_variant;RANBP2|p.C2737Vfs*35|1|0.18|ENSG00000153201|chr2:108772957-108772957|T/-|frameshift_variant;RANBP2|p.F3068Lfs*10|1|0.06|ENSG00000153201|chr2:108782692-108782692|T/-|frameshift_variant;RANBP2|p.F3068Lfs*10|1|0.06|ENSG00000153201|chr2:108782692-108782692|T/-|frameshift_variant;RANBP2|p.F3068Lfs*10|1|0.06|ENSG00000153201|chr2:108782692-108782692|T/-|frameshift_variant;RANBP2|p.H3114Sfs*18|1|0.33|ENSG00000153201|chr2:108782827-108782828|-/T|frameshift_variant;RANBP2|p.H3114Sfs*18|1|0.33|ENSG00000153201|chr2:108782827-108782828|-/T|frameshift_variant;RANBP2|p.H3114Sfs*18|1|0.33|ENSG00000153201|chr2:108782827-108782828|-/T|frameshift_variant;RANBP2|p.K1989Nfs*9|1|0.05|ENSG00000153201|chr2:108766505-108766506|-/TATCCTG|frameshift_variant;RANBP2|p.K1989Nfs*9|1|0.05|ENSG00000153201|chr2:108766505-108766506|-/TATCCTG|frameshift_variant;RANBP2|p.K1989Nfs*9|1|0.05|ENSG00000153201|chr2:108766505-108766506|-/TATCCTG|frameshift_variant;RANBP2|p.K2576Nfs*63|2|0.22|ENSG00000153201|chr2:108768262-108768262|A/-|frameshift_variant;RANBP2|p.K2576Nfs*63|2|0.22|ENSG00000153201|chr2:108768262-108768262|A/-|frameshift_variant;RANBP2|p.K2576Nfs*63|2|0.22|ENSG00000153201|chr2:108768262-108768262|A/-|frameshift_variant	68.84614121027924	0.14577793175421136	1				NaN	NaN	0	NaN	7258	5569	12828
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12830	39.529	NaN	1112.5	30	0	137.97	0.035			+	-1	QRPVPMGPM	9	48	514.756066183572	1027.4975794339439	2	514.7556762695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_QRPVPMGPM(Oxidation (M))_	REV__ENST00000463516.5_1_7:45010302-45010474:-|nuORF	40.5726180659479	0.4135428067754104	1				NaN	NaN	0	NaN	7259	5569	12828
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12834	39.544	NaN	1316.4	30	0	264.53	0.143				-1	ASMKKVKSL	9	28	336.5341846314118	NaN	0	336.5339660644531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ASM(Oxidation (M))KKVKSL_	ENST00000369426.9_1_1:119575536-119588262:-|nuORF	19.996771675451527	0.3693019437812985	1				NaN	NaN	0	NaN	7260	5572	12833
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12839	39.56	NaN	979.32	30	0	210.54	0.141	+			28025	MYTGTLDC	8	34	452.1824134013131	902.3502738694262	2	452.1832275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MYTGTLDC_	ENSG00000005022|ENST00000317881|SLC25A5;ENST00000422717.1_1_9:32333457-32333676:-|nuORF;ENST00000435239.1_1_7:32511604-32512018:+|nuORF;ENST00000444439.1_1_7:54487838-54488018:+|nuORF;ENST00000463551.1_1_X:118604271-118605018:+|nuORF	13.775330524044264	0.789990904165365	1				NaN	NaN	0	NaN	7262	5575	12838
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12846	39.592	NaN	1483.1	30	0	137.47	0.144	+			6618	AYQSVQETW	9	46	556.2571189186649	NaN	0	556.2559814453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AYQSVQETW_	ENSG00000204385|ENST00000229729|SLC44A4;nc|ENSG00000204385|Q53GD3-3|SLC44A4;nc|ENSG00000204385|Q53GD3-4|SLC44A4;SLC44A4|p.F618Sfs*25|1|0.43|ENSG00000204385|chr6:31864889-31864889|A/-|frameshift_variant;SLC44A4|p.G398Afs*7|1|0.29|ENSG00000204385|chr6:31869197-31869197|G/-|frameshift_variant;SLC44A4|p.S619Lfs*9|1|0.31|ENSG00000204385|chr6:31864888-31864889|-/A|frameshift_variant	62.107414245175825	0.1403307765918332	1				NaN	NaN	0	NaN	7263	5581	12845
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12856	39.628	NaN	1110.6	30	0	210.59	0.214	+			28483	NGKPPVQK	8	36	434.25433349609375	NaN	0	434.25433349609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NGKPPVQK_	EYS|p.D2261N|1|0.19|ENSG00000188107|chr6:63999128-63999128|C/T|missense_variant	24.20275056022122	1.7418937515398478	1				NaN	NaN	0	NaN	7267	5587	12855
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12857	39.632	NaN	905.48	30	0	102.12	0.106	+			41334	SVLSPLLNK	9	42	485.7999414669871	969.5853300007742	2	485.80023193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVLSPLLNK_	ENSG00000151491|ENST00000281172|EPS8;nc|ENSG00000151491|Q12929-2|EPS8	40.77816245573522	0.41113185337114944	1				NaN	NaN	0	NaN	7268	5587	12855
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12858	39.634	NaN	1363.7	30	0	52.34	0.044				-1	QWMKKWWEMKR	11	71	826.9145148521583	NaN	0	826.915283203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_QWMKKWWEM(Oxidation (M))KR_	ENSG00000130234|ENST00000252519|ACE2;nc|ENSG00000130234|Q9BYF1-3|ACE2	5.921104790170933	0.456735970842152	1				NaN	NaN	0	NaN	7269	5587	12855
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12863	39.649	NaN	2568.9	30	0	446.59	0.145	+			13451	GLIHGDFNEF	10	65	574.7720669658461	1147.529580998492	2	574.7728881835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GLIHGDFNEF_	ENSG00000058729|ENST00000283109|RIOK2;nc|ENSG00000058729|Q9BVS4-2|RIOK2	51.33545320467046	0.4446945571623749	1				NaN	NaN	0	NaN	7271	5590	12862
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12867	39.665	NaN	1626.6	30	0	236.38	0.143			+	3187	ASKKIEGKF	9	32	336.5341846314118	NaN	0	336.5345764160156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASKKIEGKF_	REV__tr|U7SUA5|U7SUA5_FUSNUOligopeptidaseFOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01160PE=3SV=1	15.641811463095205	0.38404136392510424	1				NaN	NaN	0	NaN	7272	5593	12866
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12872	39.682	NaN	1727.8	30	0	401.09	0.214			+	-1	PASTRSTC	8	39	440.20334045830566	878.3921279834113	2	440.20330810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_PASTRSTC(Carbamidomethyl (C))_	REV__ENSG00000145808|ENST00000274487|ADAMTS19;REV__nc|ENSG00000145808|Q8TE59|ADAMTS19	47.91560031466742	0.6071945918984287	1				NaN	NaN	0	NaN	7274	5596	12871
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12873	39.685	NaN	1306.9	30	0	155.44	0.035	+			14652	GTIAGLNVLR	10	54	507.3086940752534	1012.6028352173068	2	507.3087463378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTIAGLNVLR_	ENSG00000109971|ENST00000534624|HSPA8;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;ENST00000508840.1_1_8:30095113-30095479:+|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;ENST00000532167.5_1_11:122930757-122931830:-|nuORF;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;HSPA8|p.K569Dfs*6|1|0.3|ENSG00000109971|chr11:123058302-123058303|TC/-|frameshift_variant;nc|ENSG00000109971|P11142-2|HSPA8	50.033510581677724	0.4566913063131936	1				NaN	NaN	0	NaN	7275	5596	12871
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12879	39.7	NaN	1430.8	30	0	115.36	0.214	+			6503	AYAIIKEEL	9	47	525.2976411778819	1048.5807294225638	2	525.2980346679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AYAIIKEEL_	ENSG00000156802|ENST00000287394|ATAD2;ENST00000517666.5_1_8:124333376-124408650:-|nuORF	60.11826168202944	0.21262886028301267	1				NaN	NaN	0	NaN	7278	5599	12878
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12880	39.704	NaN	1598.6	30	0	299.76	0.035			+	-1	TSMNLTKGF	9	53	507.7483025680969	NaN	0	507.7481689453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_TSM(Oxidation (M))NLTKGF_	REV__tr|U7SEZ5|U7SEZ5_FUSNUAAA-ATPase-likedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02316PE=4SV=1;REV__tr|U7SZU7|U7SZU7_FUSNUAAA-ATPase-likedomain-containingprotein(Fragment)OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00951PE=4SV=1;REV__tr|U7T410|U7T410_FUSNUAAA-ATPase-likedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00212PE=4SV=1;REV__tr|U7T5C5|U7T5C5_FUSNUAAA-ATPase-likedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00520PE=4SV=1	49.44154591367651	0.21054156626303966	1				NaN	NaN	0	NaN	7279	5599	12878
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12884	39.718	NaN	1793.1	30	0	209.2	0.214			+	22753	KVEAGWPSLI	10	58	550.3095878231262	NaN	0	550.3098754882812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVEAGWPSLI_	REV__ENSG00000143799|ENST00000366794|PARP1;REV__ENST00000413631.1_1_13:111590511-111591024:+|nuORF;REV__PARP1|p.S507Afs*17|2|0.28|ENSG00000143799|chr1:226379946-226379946|T/-|frameshift_variant;REV__PARP1|p.T799Lfs*41|1|0.39|ENSG00000143799|chr1:226367491-226367491|T/-|frameshift_variant	45.02220120713402	0.3370728479115332	1				NaN	NaN	0	NaN	7280	5602	12883
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12885	39.721	NaN	3926.3	30	0	207.56	0.04	+			50256	WPTRTMPPRSH	11	81	683.3481994004328	1364.6818458676655	2	683.34716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WPTRTMPPRSH_	ENST00000538966.5_1_X:153029661-153030983:+|nuORF	49.536043120802724	0.4274608637932522	1				NaN	NaN	0	NaN	7281	5602	12883
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12890	39.736	NaN	1891	30	0	475.68	0.214			+	25620	LQPPDLAKS	9	35	484.77392973778495	967.5333065423699	2	484.7739562988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LQPPDLAKS_	REV__DHX29|p.L1034I|1|0.35|ENSG00000067248|chr5:55269607-55269607|G/T|missense_variant;REV__ENSG00000067248|ENST00000251636|DHX29;REV__ENST00000504778.5_1_5:54552318-54579000:-|nuORF	40.77816245573522	0.41113185337114944	1				NaN	NaN	0	NaN	7283	5605	12889
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12891	39.74	NaN	1987.1	30	0	262.09	0.106	+			47041	VLERRVHF	8	56	528.3083978394864	1054.6022427457726	2	528.3085327148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VLERRVHF_	ENSG00000137877|ENST00000320955|SPTBN5;SPTBN5|p.A3297Gfs*48|1|0.56|ENSG00000137877|chr15:41853672-41853673|-/C|frameshift_variant;SPTBN5|p.G2751Afs*60|1|0.08|ENSG00000137877|chr15:41857685-41857685|C/-|frameshift_variant	26.79610172149135	0.7524337208463756	1				NaN	NaN	0	NaN	7284	5605	12889
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12892	39.742	NaN	560.71	30	0	34.419	0.106			+	24238	LESVAGKRN	9	44	325.18568079524846	NaN	0	325.1854553222656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LESVAGKRN_	REV__ENSG00000174989|ENST00000652555|FBXW8;REV__nc|ENSG00000174989|Q8N3Y1-2|FBXW8	23.04248740728303	0.3589936788096251	1				NaN	NaN	0	NaN	7285	5605	12889
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12893	39.744	NaN	1313.5	30	0	144.03	0.035	+			32168	QSRGASGTRP	10	58	508.7662353515625	NaN	0	508.7662353515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QSRGASGTRP_	ENST00000370626.3_1_10:99446706-99446889:-|nuORF	33.03940026070387	0.39169079679423546	1				NaN	NaN	0	NaN	7286	5605	12889
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12906	39.805	NaN	1905.1	30	0	154.58	0.145			+	21882	KRPLKESHAIW	11	68	682.896678521756	NaN	0	682.8969116210938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KRPLKESHAIW_	REV__ENSG00000165698|ENST00000356311|SPACA9;REV__nc|ENSG00000165698|Q96E40-2|SPACA9	29.170058357718403	0.43541742044178583	1				NaN	NaN	0	NaN	7287	5617	12905
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12910	39.822	NaN	1271.8	30	0	248.49	0.143	+			50861	YEVVELLR	8	45	510.78992670698466	1019.5653004807693	2	511.291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YEVVELLR_	ENSG00000082126|ENST00000409474|MPP4;ENST00000483841.2_1_2:202545559-202558746:-|nuORF;ENST00000486212.6_1_2:202531091-202563346:-|nuORF;MPP4|p.N559Mfs*12|1|0.06|ENSG00000082126|chr2:201647734-201647734|T/-|frameshift_variant;nc|ENSG00000082126|Q96JB8-2|MPP4;nc|ENSG00000082126|Q96JB8-3|MPP4;nc|ENSG00000082126|Q96JB8-4|MPP4	54.776311868738084	0.5534952410049249	1				NaN	NaN	0	NaN	7288	5620	12909
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12915	39.838	NaN	1456.3	30	0	321.88	0.214			+	38709	SSLAIAFAQL	10	47	510.78992670698466	1019.5653004807693	2	510.7897033691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSLAIAFAQL_	REV__ENSG00000112041|ENST00000229771|TULP1;REV__ENSG00000166402|ENST00000299506|TUB;REV__nc|ENSG00000112041|O00294-2|TULP1;REV__nc|ENSG00000166402|P50607-2|TUB	45.02220120713402	0.5028680121232791	1				NaN	NaN	0	NaN	7290	5623	12914
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12916	39.842	NaN	1996.2	30	0	172.56	0.036			+	50553	YASVYLVSGV	10	61	529.283407161282	1056.5522613893638	2	529.2832641601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YASVYLVSGV_	REV__tr|U7T5G9|U7T5G9_FUSNUBranched-chainaminoacidtransportsystempermeaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00057PE=3SV=1	42.396135135203025	0.5270658956260207	1				NaN	NaN	0	NaN	7291	5623	12914
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12921	39.856	NaN	971.06	30	0	82.265	0.141			+	39773	STKIVPLGA	9	44	443.27344567124163	NaN	0	443.2730407714844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STKIVPLGA_	REV__CMYA5|p.I3735Hfs*2|1|0.08|ENSG00000164309|chr5:79758842-79758843|-/T|frameshift_variant;REV__CMYA5|p.K1823Rfs*17|2|0.34|ENSG00000164309|chr5:79734227-79734227|A/-|frameshift_variant;REV__CMYA5|p.N2399Ifs*16|1|0.46|ENSG00000164309|chr5:79735957-79735957|A/-|frameshift_variant;REV__CMYA5|p.P4051Nfs*8|1|0.05|ENSG00000164309|chr5:79799555-79799561|AACCTGG/-|frameshift_variant;REV__CMYA5|p.S3683Pfs*17|1|0.14|ENSG00000164309|chr5:79752728-79752728|T/-|frameshift_variant;REV__ENSG00000164309|ENST00000446378|CMYA5	55.50420428727701	0.16876052142120426	1				NaN	NaN	0	NaN	7293	5626	12920
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12931	39.904	NaN	1715.7	30	0	289.1	0.214			+	38381	SRSVLFLSV	9	33	336.5341846314118	NaN	0	336.5343017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SRSVLFLSV_	REV__ENST00000301764.11_1_11:61100418-61100496:-|nuORF	23.04248740728303	0.3589936788096251	1				NaN	NaN	0	NaN	7294	5635	12930
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12932	39.908	NaN	2396.4	30	0	378.68	0.037			+	13925	GRPWRPLSGGP	11	56	590.3220487519757	NaN	0	590.3221435546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GRPWRPLSGGP_	REV__ENST00000495828.1_1_1:44804991-44820908:-|nuORF	29.170058357718403	0.43541742044178583	1				NaN	NaN	0	NaN	7295	5635	12930
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12949	39.985	NaN	1044.2	30	0	225.42	0.143	+			44199	TRFSTSVRA	9	43	512.7782068948754	NaN	0	512.7783813476562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TRFSTSVRA_	ENST00000462787.5_1_3:160118144-160118276:+|nuORF	25.57405402267927	0.3484490411150625	1				NaN	NaN	0	NaN	7297	5650	12948
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12959	40.021	NaN	1715.5	30	0	238.05	0.214			+	20869	KIMQMFEL	8	41	520.2688382084674	1038.5231234837347	2	520.2694091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KIMQMFEL_	REV__MTBP|p.V306M|1|0.08|ENSG00000172167|chr8:120461194-120461194|G/A|missense_variant	37.15910966729921	0.6739408393984688	1				NaN	NaN	0	NaN	7301	5656	12958
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12960	40.024	NaN	1352.2	30	0	190.43	0.039	+			27415	MKWVQFSNLH	10	44	645.3263957367975	1288.638238540395	2	645.327392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MKWVQFSNLH_	ENSG00000048544|ENST00000053468|MRPS10	14.137123925751023	0.7446123510383054	1				NaN	NaN	0	NaN	7302	5656	12958
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12966	40.039	NaN	1373.3	30	0	164.34	0.214	+			28323	NEFVHINNL	9	55	550.279317444643	1098.5440819560858	2	550.2803344726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NEFVHINNL_	ENSG00000119414|ENST00000373547|PPP6C;nc|ENSG00000119414|O00743-2|PPP6C;nc|ENSG00000119414|O00743-3|PPP6C	49.536043120802724	0.308405419312776	1				NaN	NaN	0	NaN	7305	5659	12965
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12967	40.043	NaN	669.45	30	0	72.559	0.034	+			50089	WGLSHPLR	8	34	483.26880218526077	964.5230514373216	2	483.27294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WGLSHPLR_	RPN2|p.G196Afs*41|1|0.12|ENSG00000118705|chr20:37204794-37204794|G/-|frameshift_variant	24.20275056022122	0.7724576178584145	1				NaN	NaN	0	NaN	7306	5659	12965
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12972	40.058	NaN	1859.3	30	0	271.37	0.214			+	37962	SPGPGLLLQ	9	35	441.25774435289316	880.5009357725863	2	441.25775146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SPGPGLLLQ_	REV__ENSG00000172482|ENST00000307503|AGXT	35.61828744233558	0.47037581924408073	1				NaN	NaN	0	NaN	7308	5662	12971
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12973	40.061	NaN	1164.3	30	0	108.81	0.106			+	28487	NGLLKWGVL	9	48	500.30441846875414	998.5942840043083	2	500.3043518066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NGLLKWGVL_	REV__ENST00000338302.7_1_1:156884783-156884978:+|nuORF	31.954861631926434	0.5046124803899898	1				NaN	NaN	0	NaN	7309	5662	12971
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12974	40.063	NaN	1223.7	30	0	399.08	0.035			+	17662	IEKKLSLPS	9	35	507.8132802374898	NaN	0	507.81317138671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IEKKLSLPS_	REV__ENSG00000085465|ENST00000369732|OVGP1	36.446750945000026	0.29355505452396785	1				NaN	NaN	0	NaN	7310	5662	12971
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12979	40.078	NaN	1450.5	30	0	56.323	0.149			+	-1	RYRKWFIYCFN	11	74	826.9130249023438	NaN	0	826.9130249023438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_RYRKWFIYC(Carbamidomethyl (C))FN_	REV__ENSG00000249715|ENST00000624922|FER1L5;REV__nc|ENSG00000249715|A0AVI2-2|FER1L5;REV__nc|ENSG00000249715|A0AVI2-4|FER1L5	9.182911543092327	0.456735970842152	1				NaN	NaN	0	NaN	7312	5665	12978
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12986	40.109	NaN	2351.3	30	0	275.12	0.214	+			38236	SQLGIFISK	9	53	496.792252274656	991.569951616112	2	496.7925109863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SQLGIFISK_	ENSG00000120509|ENST00000239666|PDZD11;nc|ENSG00000120509|Q5EBL8-2|PDZD11	60.11826168202944	0.21262886028301267	1				NaN	NaN	0	NaN	7313	5671	12985
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12987	40.113	NaN	1605.8	30	0	369.85	0.036	+			17760	IERYKKEP	8	47	531.8007744459134	1061.5869959586266	2	531.8013916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IERYKKEP_	ARSH|p.R258K|1|0.49|ENSG00000205667|chrX:3018542-3018542|G/A|missense_variant	32.81241826257853	0.7059802730411993	1				NaN	NaN	0	NaN	7314	5671	12985
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12993	40.129	NaN	1198.6	30	0	111.45	0.145			+	37366	SLFIWGPLY	9	47	548.2957294556611	NaN	0	548.2962036132812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLFIWGPLY_	REV__ENSG00000234224|ENST00000455783|TMEM229A	50.0245360154114	0.20652386741182333	1				NaN	NaN	0	NaN	7317	5674	12992
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	12998	40.146	NaN	2364.8	30	0	163.52	0.145			+	21883	KRPLKESHAIW	11	69	682.896678521756	NaN	0	682.8956909179688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KRPLKESHAIW_	REV__ENSG00000165698|ENST00000356311|SPACA9;REV__nc|ENSG00000165698|Q96E40-2|SPACA9	49.536043120802724	0.3186510426945788	1				NaN	NaN	0	NaN	7319	5677	12997
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13017	40.216	NaN	1921.1	30	0	850.85	0.143	+			32290	QTNATQEVV	9	37	495.24690371636893	988.4792544995379	2	495.2471618652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QTNATQEVV_	ENSG00000104774|ENST00000456935|MAN2B1;ENST00000466794.5_1_19:12769146-12777470:-|nuORF;ENST00000486847.2_1_19:12774617-12777525:-|nuORF;ENST00000600281.1_1_19:12776145-12777515:-|nuORF;nc|ENSG00000104774|O00754-2|MAN2B1	27.047317107675042	0.5504760921104335	1				NaN	NaN	0	NaN	7326	5689	13016
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13025	40.249	NaN	1507.9	30	0	294.89	0.214			+	14408	GTAPLVILSH	10	41	336.53406937235627	1006.5803787172688	3	336.5338439941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTAPLVILSH_	REV__ENST00000444374.1_1_9:92316696-92316852:+|nuORF	27.882242232435846	0.6521336255503853	1				NaN	NaN	0	NaN	7328	5695	13024
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13026	40.253	NaN	1838.9	30	0	292.85	0.036			+	-1	ARFPPSSIMA	10	50	546.7806723607049	1091.5467917882097	2	546.780029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_ARFPPSSIM(Oxidation (M))A_	REV__ENSG00000134389|ENST00000256785|CFHR5	31.529811441608018	0.6223461015008678	1				NaN	NaN	0	NaN	7329	5695	13024
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13030	40.267	NaN	2222	30	0	841.9	0.144				-1	 	0	48	525.2880156460556	524.2807391794555	1	525.288330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7330	5698	13029
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13042	40.316	NaN	1491.6	30	0	195.44	0.145	+			34745	RYALQMEQL	9	50	576.2969170275223	1150.5792811218446	2	576.2975463867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RYALQMEQL_	ENSG00000111057|ENST00000388835|KRT18;ENST00000411618.1_1_9:30799684-30799825:-|nuORF;ENST00000549078.5_1_12:53344429-53346127:+|nuORF	58.22992032128504	0.22837015374068087	1				NaN	NaN	0	NaN	7333	5707	13041
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13052	40.364	NaN	955.83	30	0	163.13	0.141	+			47626	VSAPHCAPS	9	43	434.70251484185354	NaN	0	434.7032775878906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSAPHCAPS_	ENST00000602662.1_3_1:19984160-19984526:+|nuORF	40.5726180659479	0.27166212580479165	1				NaN	NaN	0	NaN	7334	5716	13051
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13074	40.473	NaN	1536.2	30	0	192.09	0.144	+			3432	ASQLGIFISK	10	47	532.3113209303126	1062.6080889274251	2	532.3112182617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASQLGIFISK_	ENSG00000120509|ENST00000239666|PDZD11;nc|ENSG00000120509|Q5EBL8-2|PDZD11	34.08650109265054	0.601467140718965	1				NaN	NaN	0	NaN	7335	5737	13073
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13079	40.49	NaN	1856.2	30	0	87.336	0.145			+	21884	KRPLKESHAIW	11	71	682.896678521756	NaN	0	682.8963623046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KRPLKESHAIW_	REV__ENSG00000165698|ENST00000356311|SPACA9;REV__nc|ENSG00000165698|Q96E40-2|SPACA9	32.75053402867276	0.4194607570143992	1				NaN	NaN	0	NaN	7337	5740	13078
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13084	40.507	NaN	776.4	30	0	118.24	0.141	+			25152	LLSPRPSV	8	34	434.7660726733017	NaN	0	434.7665710449219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LLSPRPSV_	ENST00000394339.2_1_4:124320716-124320803:+|nuORF	32.81241826257853	1.7418937515398478	1				NaN	NaN	0	NaN	7339	5743	13083
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13092	40.539	NaN	2227.9	30	0	188.65	0.149				-1	QWMKKWWEMKR	11	80	826.9137999282901	1651.8130469233802	2	827.4151611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_QWM(Oxidation (M))KKWWEMKR_	ENSG00000130234|ENST00000252519|ACE2;nc|ENSG00000130234|Q9BYF1-3|ACE2	0.8280856835056912	0.8974014533368192	1				NaN	NaN	0	NaN	7341	5749	13091
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13100	40.572	NaN	1359.8	30	0	137.66	0.142			+	35292	SALYPVKK	8	37	453.2765935357269	904.5386341382538	2	453.27667236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SALYPVKK_	REV__ENSG00000136636|ENST00000259154|KCTD3;REV__nc|ENSG00000136636|Q9Y597-2|KCTD3;REV__nc|ENSG00000136636|Q9Y597-3|KCTD3	45.9519527083369	0.6193794311207887	1				NaN	NaN	0	NaN	7343	5755	13099
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13105	40.589	NaN	1823.7	30	0	216.93	0.214	+			48730	VTVDAQLLL	9	44	486.2921178074186	970.5696826816372	2	486.2921447753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTVDAQLLL_	ENSG00000077943|ENST00000378076|ITGA8;ENST00000468882.1_1_10:15655657-15686119:-|nuORF	71.29570347882199	0.13518600952103718	1				NaN	NaN	0	NaN	7345	5758	13104
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13106	40.592	NaN	1493.3	30	0	205.64	0.106	+			35268	SALPNPPALK	10	34	336.5342142174277	1006.580813252483	3	336.5341491699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SALPNPPALK_	CUX1|p.E933Sfs*59|1|0.14|ENSG00000257923|chr7:102202089-102202089|C/-|frameshift_variant;CUX1|p.I1081Sfs*39|2|0.46|ENSG00000257923|chr7:102227471-102227471|C/-|frameshift_variant;ENSG00000257923|ENST00000292535|CUX1;nc|ENSG00000257923|P39880-2|CUX1;nc|ENSG00000257923|P39880-3|CUX1;nc|ENSG00000257923|P39880-4|CUX1;nc|ENSG00000257923|P39880-5|CUX1;nc|ENSG00000257923|P39880-6|CUX1	25.57405402267927	0.6709832231498071	1				NaN	NaN	0	NaN	7346	5758	13104
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13107	40.594	NaN	1738.9	30	0	610.75	0.035			+	9720	EMRSAPVSL	9	42	495.2574192139779	988.5002854947559	2	495.2573547363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EMRSAPVSL_	REV__ENST00000571707.1_1_17:79609405-79612656:+|nuORF	37.81151784470057	0.4459294069877048	1				NaN	NaN	0	NaN	7347	5758	13104
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13111	40.608	NaN	1843.9	30	0	192.84	0.144			+	37225	SKNATSPFSL	10	47	526.2746810365496	1050.5348091398992	2	526.2749633789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SKNATSPFSL_	REV__ENSG00000183185|ENST00000472788|GABRR3	37.81151784470057	0.569310847604193	1				NaN	NaN	0	NaN	7348	5761	13110
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13127	40.675	NaN	1283.3	30	0	90.132	0.142			+	36065	SEIVTAVKL	9	43	480.2919455426133	958.5693381520266	2	480.29193115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEIVTAVKL_	REV__ENSG00000054793|ENST00000338821|ATP9A;REV__nc|ENSG00000054793|O75110-2|ATP9A	72.87924865735499	0.12833875048249987	1				NaN	NaN	0	NaN	7352	5773	13126
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13131	40.691	NaN	1939.3	30	0	437.61	0.143	+			49669	VYISNGQVL	9	46	496.77414326106305	991.5337335889261	2	496.77410888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYISNGQVL_	ENSG00000113811|ENST00000495461|SELENOK;ENST00000487571.1_1_3:53922418-53925815:-|nuORF	69.6276240434122	0.14239879520340665	1				NaN	NaN	0	NaN	7353	5776	13130
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13135	40.708	NaN	1024.9	30	0	152.59	0.143	+			5474	AVAAFVLYK	9	34	491.2917844924567	980.5690160517134	2	491.2911071777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVAAFVLYK_	CCDC107|p.A74V|1|0.5|ENSG00000159884|chr9:35658690-35658690|C/T|missense_variant;ENSG00000159884|ENST00000426546|CCDC107;nc|ENSG00000159884|Q8WV48-2|CCDC107;nc|ENSG00000159884|Q8WV48-3|CCDC107;nc|ENSG00000159884|Q8WV48-4|CCDC107;nc|ENSG00000159884|Q8WV48-5|CCDC107	32.81241826257853	0.4965981579233955	1				NaN	NaN	0	NaN	7354	5779	13134
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13142	40.74	NaN	1267	30	0	169.97	0.144			+	10812	FAMPWPAAGL	10	55	530.7676442318809	1059.5207355305618	2	530.76904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FAMPWPAAGL_	REV__DVL3|p.P527L|1|0.31|ENSG00000161202|chr3:184170087-184170087|C/T|missense_variant	35.200714571348534	0.5923680232273616	1				NaN	NaN	0	NaN	7355	5785	13141
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13158	40.818	NaN	1247.9	30	0	140.84	0.214			+	46540	VFDRSAVIY	9	42	535.2874941713303	NaN	0	535.287353515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VFDRSAVIY_	REV__ENSG00000140297|ENST00000396065|GCNT3	34.172542307311794	0.30503706118289736	1				NaN	NaN	0	NaN	7356	5800	13157
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13159	40.822	NaN	1771	30	0	171.11	0.039			+	26667	LVFITRRGHPD	11	55	655.8692626953125	NaN	0	655.8692626953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LVFITRRGHPD_	REV__ENSG00000198836|ENST00000361510|OPA1;REV__ENST00000475899.1_1_3:193355061-193361921:+|nuORF;REV__nc|ENSG00000198836|O60313-11|OPA1;REV__nc|ENSG00000198836|O60313-13|OPA1;REV__nc|ENSG00000198836|O60313-2|OPA1;REV__nc|ENSG00000198836|O60313-9|OPA1;REV__nc|ENSG00000198836|O60313|OPA1	34.50088687433636	0.4116601758055963	1				NaN	NaN	0	NaN	7357	5800	13157
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13163	40.928	NaN	11056	30	0	1148.5	0.214	+			15474	GVAFIFNQK	9	68	512.2848685227909	1022.5551841123819	2	512.2847900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVAFIFNQK_	ENSG00000133816|ENST00000683283|MICAL2;ENSG00000243156|ENST00000441493|MICAL3;ENST00000530691.5_1_11:12229562-12281716:+|nuORF;MICAL2|p.E821Kfs*48|1|0.07|ENSG00000133816|chr11:12242336-12242337|AG/-|frameshift_variant;MICAL3|p.A1313Lfs*17|1|0.24|ENSG00000243156|chr22:17818727-17818727|G/-|frameshift_variant;MICAL3|p.R1499Gfs*106|7|0.44|ENSG00000243156|chr22:17818166-17818166|G/-|frameshift_variant;MICAL3|p.R1706Afs*24|1|0.3|ENSG00000243156|chr22:17817545-17817545|G/-|frameshift_variant;nc|ENSG00000133816|O94851-2|MICAL2;nc|ENSG00000133816|O94851-3|MICAL2;nc|ENSG00000133816|O94851-4|MICAL2;nc|ENSG00000133816|O94851-5|MICAL2;nc|ENSG00000133816|O94851-6|MICAL2;nc|ENSG00000133816|O94851|MICAL2;nc|ENSG00000243156|Q7RTP6-2|MICAL3;nc|ENSG00000243156|Q7RTP6-3|MICAL3;nc|ENSG00000243156|Q7RTP6-4|MICAL3;nc|ENSG00000243156|Q7RTP6-5|MICAL3	148.20599733432147	0.007287282186870133	1				NaN	NaN	0	NaN	7358	5803	13162
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13164	40.931	NaN	3562.7	30	0	498.92	0.106	+			42157	SYSQSSNLF	9	63	516.7352568635239	1031.4559607938477	2	516.7354736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SYSQSSNLF_	ENSG00000172466|ENST00000261332|ZNF24;ENST00000589881.5_1_18:32917198-32917747:-|nuORF	106.68306549817024	0.032382560583716295	1				NaN	NaN	0	NaN	7359	5803	13162
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13165	40.933	NaN	2396.8	30	0	177.92	0.04				-1	 	0	68	682.896467428939	1363.778381924678	2	682.8980102539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7360	5803	13162
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13170	40.948	NaN	1416.7	30	0	260.8	0.143	+			1649	AGPLLQPAQL	10	33	336.5342142174277	1006.580813252483	3	336.53411865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AGPLLQPAQL_	CPEB2|p.C544Lfs*12|1|0.1|ENSG00000137449|chr4:15066233-15066234|-/T|frameshift_variant;CPEB2|p.C544Vfs*31|5|0.34|ENSG00000137449|chr4:15066234-15066234|T/-|frameshift_variant;ENSG00000137449|ENST00000538197|CPEB2;nc|ENSG00000137449|Q7Z5Q1-8|CPEB2	17.364965105453717	0.7282106878714807	1				NaN	NaN	0	NaN	7362	5806	13169
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13181	40.996	NaN	1383.9	30	0	69.802	0.149			+	-1	RYRKWFIYCFN	11	69	826.9132329702752	1651.8119130073503	2	826.9139404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_RYRKWFIYC(Carbamidomethyl (C))FN_	REV__ENSG00000249715|ENST00000624922|FER1L5;REV__nc|ENSG00000249715|A0AVI2-2|FER1L5;REV__nc|ENSG00000249715|A0AVI2-4|FER1L5	9.182911543092327	0.8274909109651483	1				NaN	NaN	0	NaN	7364	5815	13180
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13192	41.044	NaN	1494.8	30	0	152.25	0.145	+			40951	SVFVETFVQK	10	55	592.3214241757819	NaN	0	592.3209838867188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVFVETFVQK_	ENSG00000170786|ENST00000303749|SDR16C5;nc|ENSG00000170786|Q8N3Y7-2|SDR16C5	58.2462437865262	0.2485996375737153	1				NaN	NaN	0	NaN	7366	5824	13191
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13199	41.076	NaN	1568.8	30	0	195.96	0.144	+			7313	DASLKTYLY	9	49	537.2793750043043	1072.5441970754084	2	537.280029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DASLKTYLY_	ENSG00000186952|ENST00000455884|TMEM232;ENST00000515518.6_1_5:109760554-109978041:-|nuORF;nc|ENSG00000186952|C9JQI7-2|TMEM232;TMEM232|p.N394Ifs*13|3|0.32|ENSG00000186952|chr5:110605204-110605204|T/-|frameshift_variant	54.776311868738084	0.25715957988447635	1				NaN	NaN	0	NaN	7367	5830	13198
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13209	41.123	NaN	1998.3	30	0	290.8	0.145				-1	ELAMVLDQIE	10	48	588.7943684115959	1175.5741838899917	2	588.795654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ELAM(Oxidation (M))VLDQIE_	ENSG00000124194|ENST00000342560|GDAP1L1;nc|ENSG00000124194|Q96MZ0-4|GDAP1L1	24.519189625965996	0.6795976720565101	1				NaN	NaN	0	NaN	7368	5839	13208
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13213	41.139	NaN	1522.1	30	0	188.33	0.214			+	-1	IAQIILDCN	9	44	530.277419386791	1058.540285840382	2	530.2770385742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_IAQIILDC(Carbamidomethyl (C))N_	REV__ENSG00000179256|ENST00000316048|SMCO3	36.446750945000026	0.4619375763483977	1				NaN	NaN	0	NaN	7369	5842	13212
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13214	41.143	NaN	705.04	30	0	130.88	0.033			+	5597	AVAVVSAVAL	10	33	450.281855369054	NaN	0	450.2818603515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVAVVSAVAL_	REV__PPP1R10|p.H751Kfs*162|1|0.37|ENSG00000204569|chr6:30602386-30602398|CGTGAGGACGATG/-|frameshift_variant	30.503639358989545	0.4000169810673414	1				NaN	NaN	0	NaN	7370	5842	13212
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13226	41.189	NaN	2082.4	30	0	170.74	0.144	+			28393	NENSLFKSL	9	56	526.2744913274353	1050.5344297216704	2	526.2749633789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NENSLFKSL_	CLTC|p.A1374*|1|0.05|ENSG00000141367|chr17:59683464-59683465|-/TA|frameshift_variant;ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000141367|Q00610-2|CLTC	77.53327743719008	0.1082147015697554	1				NaN	NaN	0	NaN	7373	5851	13225
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13233	41.222	NaN	2029.3	30	0	164.96	0.145				-1	MCLPFCLMRA	10	58	600.7738545184235	NaN	0	600.7743530273438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_MCLPFCLM(Oxidation (M))RA_	ENST00000580580.1_1_18:74694183-74696045:+|nuORF	24.20275056022122	0.4201028297492154	1				NaN	NaN	0	NaN	7374	5857	13232
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13245	41.27	NaN	2522.5	30	0	143.07	0.145			+	25697	LRKPNPEAQRR	11	75	682.896467428939	1363.778381924678	2	682.896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LRKPNPEAQRR_	REV__ENSG00000169122|ENST00000519262|FAM110B	23.52269567125451	0.7430573033454468	1				NaN	NaN	0	NaN	7377	5866	13244
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13252	41.302	NaN	1314.9	30	0	270.67	0.143				-1	ASTKKVVMK	9	30	336.5342467032778	NaN	0	336.53424072265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ASTKKVVM(Oxidation (M))K_	CFAP47|p.F1567Vfs*4|1|0.31|ENSG00000165164|chrX:36098829-36098830|-/G|frameshift_variant;CFAP47|p.H2345Afs*15|1|0.09|ENSG00000165164|chrX:36236809-36236810|-/A|frameshift_variant;CFAP47|p.K734Nfs*6|1|0.13|ENSG00000165164|chrX:35971909-35971909|A/-|frameshift_variant;CFAP47|p.P2326Tfs*34|1|0.26|ENSG00000165164|chrX:36236751-36236752|-/A|frameshift_variant;ENSG00000165164|ENST00000378653|CFAP47;nc|ENSG00000165164|Q6ZTR5-1|CFAP47;nc|ENSG00000165164|Q6ZTR5-2|CFAP47;nc|ENSG00000165164|Q6ZTR5-6|CFAP47	14.137123925751023	0.3891339986947948	1				NaN	NaN	0	NaN	7378	5872	13251
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13265	41.365	NaN	1915.7	30	0	1045	0.139				-1	 	0	37	347.20369431443737	346.1964178478374	1	347.2037048339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7379	5884	13264
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13269	41.381	NaN	1121.9	30	0	303.13	0.143			+	-1	NLCIFLFP	8	37	512.2679713173711	NaN	0	512.2680053710938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_NLC(Carbamidomethyl (C))IFLFP_	REV__ENST00000570267.2_1_16:89283700-89284024:-|nuORF	37.028477286268924	1.7418937515398478	1				NaN	NaN	0	NaN	7380	5887	13268
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13273	41.398	NaN	1040.4	30	0	153.09	0.143	+			41248	SVLGQLGITK	10	42	508.31063386287946	NaN	0	508.31060791015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVLGQLGITK_	ENSG00000197249|ENST00000393087|SERPINA1;ENST00000489769.1_1_14:94844788-94846995:-|nuORF;nc|ENSG00000197249|P01009-2|SERPINA1;SERPINA1|p.L377*|1|0.19|ENSG00000197249|chr14:94378576-94378576|A/-|frameshift_variant;SERPINA1|p.T369Rfs*3|1|0.05|ENSG00000197249|chr14:94378605-94378606|-/CCCC|frameshift_variant	31.068146907933308	0.3981634175579081	1				NaN	NaN	0	NaN	7381	5890	13272
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13277	41.414	NaN	1135	30	0	155.63	0.214			+	15346	GTVLVWRF	8	40	489.28234867795675	NaN	0	489.28228759765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTVLVWRF_	REV__ENST00000526757.5_1_11:8715264-8715453:-|nuORF	26.79610172149135	1.7418937515398478	1				NaN	NaN	0	NaN	7382	5893	13276
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13278	41.417	NaN	1209.9	30	0	132.7	0.106			+	205	AALLIPVVK	9	42	462.3180025156978	922.6214520981956	2	462.317138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AALLIPVVK_	REV__ENSG00000185518|ENST00000394232|SV2B;REV__nc|ENSG00000185518|Q7L1I2-2|SV2B	25.450171626174864	0.5654022654467333	1				NaN	NaN	0	NaN	7383	5893	13276
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13279	41.419	NaN	1592.5	30	0	322.81	0.036				-1	LRIHYLLM	8	52	537.8086547851562	NaN	0	537.8086547851562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_LRIHYLLM(Oxidation (M))_	ENST00000536720.1_1_12:109530171-109530633:-|nuORF	44.53106598305862	1.7418937515398478	1				NaN	NaN	0	NaN	7384	5893	13276
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13283	41.433	NaN	823.57	30	0	84.441	0.141			+	33897	RRRGVGSV	8	46	443.7714804181044	885.5284079030088	2	443.7711486816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RRRGVGSV_	REV__ENST00000335223.5_1_9:130455530-130477918:-|nuORF;REV__ENST00000430328.6_1_2:152266682-152266823:+|nuORF	37.15910966729921	0.6739408393984688	1				NaN	NaN	0	NaN	7385	5896	13282
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13294	41.481	NaN	1711.8	30	0	297.62	0.144	+			23293	KYNANFVTF	9	40	552.2797257000458	1102.5448984668915	2	552.2805786132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KYNANFVTF_	ENSG00000173120|ENST00000529006|KDM2A;ENST00000527157.1_1_11:66888787-66947744:+|nuORF;KDM2A|p.G855Efs*24|2|0.34|ENSG00000173120|chr11:67250589-67250589|G/-|frameshift_variant;KDM2A|p.L300Cfs*10|1|0.4|ENSG00000173120|chr11:67219340-67219340|T/-|frameshift_variant;KDM2A|p.R834Vfs*3|1|0.38|ENSG00000173120|chr11:67250525-67250525|C/-|frameshift_variant;nc|ENSG00000173120|Q9Y2K7-3|KDM2A	37.15910966729921	0.4535818937225704	1				NaN	NaN	0	NaN	7387	5905	13293
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13320	41.608	NaN	1889.5	30	0	205.7	0.145			+	22853	KVIRNMKIIFC	11	61	682.8967895507812	NaN	0	682.8967895507812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVIRNMKIIFC_	REV__ATP4B|p.Y241Lfs*18|1|0.07|ENSG00000186009|chr13:113649530-113649531|-/A|frameshift_variant;REV__ENSG00000186009|ENST00000335288|ATP4B	19.996771675451527	0.456735970842152	1				NaN	NaN	0	NaN	7389	5929	13319
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13327	41.639	NaN	1169.4	30	0	226.79	0.143	+			1591	AGKTTFAAKL	10	30	336.53426951427605	1006.5809791430281	3	336.5345458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AGKTTFAAKL_	tr|U7T8Q8|U7T8Q8_FUSNUSignalrecognitionparticleproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=ffhPE=3SV=1	15.641811463095205	0.7369665665077569	1				NaN	NaN	0	NaN	7390	5935	13326
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13344	41.719	NaN	682.49	30	0	68.627	0.142	+			47961	VSMLVTQGL	9	32	474.2630615234375	NaN	0	474.2630615234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSMLVTQGL_	ENSG00000145247|ENST00000508632|OCIAD2;nc|ENSG00000145247|Q56VL3-2|OCIAD2	24.519189625965996	0.35377483217337163	1				NaN	NaN	0	NaN	7392	5950	13343
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13357	41.782	NaN	935.81	30	0	189.51	0.214	+			12032	FYISPVNKL	9	47	540.8084290355188	NaN	0	540.8084106445312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FYISPVNKL_	ENSG00000105778|ENST00000318709|AVL9;nc|ENSG00000105778|Q8NBF6-2|AVL9	52.936696900407355	0.1864545979552969	1				NaN	NaN	0	NaN	7393	5962	13356
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13358	41.786	NaN	995.15	30	0	65.908	0.036	+			23183	KWNPTAGVAF	10	52	545.7871024839536	1089.5596520347071	2	545.7879638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KWNPTAGVAF_	ENSG00000102978|ENST00000219252|POLR2C;ENST00000562953.5_1_16:57496627-57504105:+|nuORF;ENST00000564651.5_1_16:57496627-57504171:+|nuORF	40.05817265558897	0.5486090488315611	1				NaN	NaN	0	NaN	7394	5962	13356
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13368	41.831	NaN	1193.3	30	0	316.97	0.139				-1	 	0	45	347.20369431443737	346.1964178478374	1	347.2037048339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7395	5971	13367
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13372	41.847	NaN	1727	30	0	467.65	0.14				-1	 	0	50	415.7028758431941	829.3911987531882	2	415.70269775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7396	5974	13371
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13395	41.958	NaN	1147.8	30	0	154.28	0.139				-1	 	0	45	347.20369431443737	346.1964178478374	1	347.199951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7398	5995	13394
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13400	41.975	NaN	1641.7	30	0	239.02	0.214			+	14882	GTLPLIKHE	9	41	336.53426951427605	1006.5809791430281	3	336.5342102050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTLPLIKHE_	REV__ENSG00000197121|ENST00000354764|PGAP1;REV__nc|ENSG00000197121|Q75T13-3|PGAP1;REV__PGAP1|p.K353Sfs*13|1|0.37|ENSG00000197121|chr2:196892376-196892377|TT/-|frameshift_variant;REV__PGAP1|p.K723Yfs*11|1|0.11|ENSG00000197121|chr2:196846002-196846003|-/CTATGTGTTTAAGGTAT|frameshift_variant	12.959181472943097	0.6112419832031292	1				NaN	NaN	0	NaN	7400	5998	13399
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13401	41.978	NaN	1199.9	30	0	424.92	0.034	+			1099	AELGNMQGL	9	29	466.72920454205337	931.4438561509068	2	466.7294006347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AELGNMQGL_	CON__P05787;CON__Q9H552;ENSG00000170421|ENST00000692008|KRT8;ENST00000405771.3_1_6:134619244-134619385:-|nuORF;ENST00000409686.2_1_9:102067468-102068890:+|nuORF;ENST00000414328.2_1_1:157043381-157043870:+|nuORF;ENST00000441609.1_1_6:162989483-162989972:+|nuORF;ENST00000450021.1_1_2:183936291-183936849:-|nuORF;ENST00000550170.5_1_12:53294858-53298765:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	24.519189625965996	0.574102787014149	1				NaN	NaN	0	NaN	7401	5998	13399
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13465	42.292	NaN	2255.8	30	0	279.29	0.144	+			14798	GTLDYILQR	9	49	539.7980637596612	1077.5815745861223	2	539.7985229492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTLDYILQR_	ENSG00000140718|ENST00000471389|FTO	90.36981228632155	0.0638227155548745	1				NaN	NaN	0	NaN	7405	6058	13464
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13476	42.34	NaN	1308.7	30	0	250.68	0.143	+			46742	VGRLILYSS	9	32	336.53419209424027	1006.5807468829208	3	336.5341491699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VGRLILYSS_	ENSG00000144320|ENST00000272748|LNPK;nc|ENSG00000144320|Q9C0E8-2|LNPK;nc|ENSG00000144320|Q9C0E8-4|LNPK	18.324413293986947	0.6112419832031293	1				NaN	NaN	0	NaN	7407	6067	13475
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13486	42.388	NaN	878.3	30	0	114.47	0.143			+	47554	VRCLDRVR	8	34	508.7926442257517	NaN	0	508.7928771972656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VRCLDRVR_	REV__BRF2|p.P374Lfs*16|1|0.2|ENSG00000104221|chr8:37844629-37844629|G/-|frameshift_variant;REV__ENSG00000104221|ENST00000220659|BRF2;REV__nc|ENSG00000104221|Q9HAW0-2|BRF2	38.80614096846853	1.7418937515398478	1				NaN	NaN	0	NaN	7408	6076	13485
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13490	42.404	NaN	1214.5	30	0	104.04	0.143	+			41578	SVQGFFLNH	9	50	524.7642600031201	1047.51396707304	2	524.7643432617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVQGFFLNH_	ENSG00000180011|ENST00000322342|PTGR3;nc|ENSG00000180011|Q8N4Q0-2|PTGR3	52.936696900407355	0.27249468807391813	1				NaN	NaN	0	NaN	7409	6079	13489
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13494	42.42	NaN	1185	30	0	370.53	0.141	+			2569	AQCHANSL	8	32	422.19333373453617	842.3721145358724	2	422.6928405761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AQCHANSL_	ENSG00000152990|ENST00000334304|ADGRA3;nc|ENSG00000152990|Q8IWK6-3|ADGRA3	18.324413293986947	0.7971860551947066	1				NaN	NaN	0	NaN	7410	6082	13493
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13501	42.452	NaN	970.61	30	0	108.24	0.144			+	26472	LTKSFSNFY	9	44	553.7794140700973	1105.5442752069946	2	553.7794799804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LTKSFSNFY_	REV__tr|U7SF08|U7SF08_FUSNUCRISPRtypeIII-a/mtube-associatedproteincsm6OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02349PE=4SV=1	34.172542307311794	0.4838870758800184	1				NaN	NaN	0	NaN	7411	6088	13500
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13508	42.484	NaN	1038	30	0	250.57	0.214			+	-1	MRQLGFCF	8	42	529.7510860021965	1057.487619071193	2	530.2532348632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_MRQLGFC(Carbamidomethyl (C))F_	REV__ENSG00000125149|ENST00000219139|PHAF1	29.841539824830324	0.7289191502596711	1				NaN	NaN	0	NaN	7412	6094	13507
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13509	42.487	NaN	1261.1	30	0	379.24	0.036	+			49653	VYINTAQEF	9	43	542.7694129826477	NaN	0	542.7697143554688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYINTAQEF_	ENSG00000095059|ENST00000210060|DHPS;ENST00000600510.1_1_19:12786654-12786995:-|nuORF;nc|ENSG00000095059|P49366-3|DHPS	63.53385203322761	0.134247007536971	1				NaN	NaN	0	NaN	7413	6094	13507
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13522	42.549	NaN	2256.4	30	0	513.65	0.214			+	-1	HGAGLCTQ	8	42	422.19333373453617	842.3721145358724	2	422.6925048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_HGAGLC(Carbamidomethyl (C))TQ_	REV__ENST00000262395.9_1_17:27076744-27076957:+|nuORF	26.79610172149135	0.7524337208463756	1				NaN	NaN	0	NaN	7414	6106	13521
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13523	42.552	NaN	1010.3	30	0	77.528	0.034	+			12633	GEIIGVKVL	9	37	464.29754508407376	926.5805372349475	2	464.2968444824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEIIGVKVL_	ENSG00000180817|ENST00000373232|PPA1	37.81151784470057	0.4459294069877048	1				NaN	NaN	0	NaN	7415	6106	13521
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13530	42.582	NaN	488.83	30	0	96.371	0.214	+			6378	AVVEANKLI	9	26	478.79144287109375	NaN	0	478.79144287109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVVEANKLI_	MTTP|p.K454N|1|0.11|ENSG00000138823|chr4:99606765-99606765|G/T|missense_variant	21.9598887501803	0.3626577482100488	1				NaN	NaN	0	NaN	7416	6112	13529
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13531	42.586	NaN	850.49	30	0	231.53	0.035	+			49524	VYAILTHGI	9	37	493.78706322317765	NaN	0	493.7873840332031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYAILTHGI_	ENSG00000101911|ENST00000380668|PRPS2;ENSG00000147224|ENST00000372435|PRPS1;ENSG00000229937|ENST00000506618|PRPS1L1;nc|ENSG00000101911|P11908-2|PRPS2;nc|ENSG00000147224|P60891-2|PRPS1;PRPS1|p.T242I|1|0.5|ENSG00000147224|chrX:107647626-107647626|C/T|missense_variant	47.91560031466742	0.22105767942158736	1				NaN	NaN	0	NaN	7417	6112	13529
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13544	42.647	NaN	793.64	30	0	201.02	0.144			+	27791	MRVISIGGEG	10	27	509.7713317871094	NaN	0	509.7713317871094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MRVISIGGEG_	REV__tr|U7SZX8|U7SZX8_FUSNUtRNAmodificationGTPaseMnmEOS=FusobacteriumnucleatumCTI-5OX=1316586GN=mnmEPE=3SV=1	36.31764250033197	0.3809266711384728	1				NaN	NaN	0	NaN	7418	6124	13543
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13554	42.695	NaN	2152.2	30	0	277.19	0.144	+			45371	TVTEVLLKY	9	49	533.3131073144702	1064.6116616957404	2	533.313720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVTEVLLKY_	ENSG00000085721|ENST00000198767|RRN3;ENST00000427965.6_1_16:29086353-29124388:+|nuORF;ENST00000551901.5_1_16:21823661-21831677:-|nuORF;ENST00000564580.5_1_16:29086353-29108616:+|nuORF;ENST00000566038.1_1_16:29086353-29102074:+|nuORF;nc|ENSG00000085721|Q9NYV6-2|RRN3;nc|ENSG00000085721|Q9NYV6-3|RRN3;nc|ENSG00000103472|A6NIE6|RRN3P2	72.87924865735499	0.12833875048249987	1				NaN	NaN	0	NaN	7419	6133	13553
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13584	42.841	NaN	2241.8	30	0	337.32	0.142	+			5967	AVLLVFANK	9	53	487.80512307356383	973.5956932139277	2	487.804931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVLLVFANK_	ENSG00000004059|ENST00000000233|ARF5;ENSG00000134287|ENST00000256682|ARF3;ENSG00000143761|ENST00000272102|ARF1;ENST00000406466.2_1_7:94463564-94463681:+|nuORF;ENST00000444561.2_1_17:43710417-43713807:+|nuORF;ENST00000463733.5_1_7:127230086-127231350:+|nuORF;ENST00000470670.5_1_1:228284963-228285711:+|nuORF;nc|ENSG00000134287|P61204-2|ARF3	104.74654710444128	0.034358562718640136	1				NaN	NaN	0	NaN	7422	6160	13583
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13589	42.858	NaN	841.94	30	0	112.3	0.141			+	23531	LAIGIVIKA	9	37	449.31014339485034	896.6057338565007	2	449.8110656738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LAIGIVIKA_	REV__ENSG00000101292|ENST00000678254|PROKR2	40.5726180659479	0.4135428067754104	1				NaN	NaN	0	NaN	7424	6163	13588
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13596	42.89	NaN	1436	30	0	222.7	0.214				-1	HQVAMGQG	8	42	422.19333373453617	842.3721145358724	2	422.1950988769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_HQVAM(Oxidation (M))GQG_	DYNC2H1|p.L4021Wfs*5|1|0.3|ENSG00000187240|chr11:103358262-103358262|T/-|frameshift_variant;DYNC2H1|p.P3966Hfs*44|1|0.22|ENSG00000187240|chr11:103321194-103321194|T/-|frameshift_variant;ENSG00000187240|ENST00000375735|DYNC2H1;nc|ENSG00000187240|Q8NCM8-2|DYNC2H1	20.481830146152948	0.8005983782650069	1				NaN	NaN	0	NaN	7425	6169	13595
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13597	42.894	NaN	1179.3	30	0	214.57	0.035			+	14745	GTKEKKIGF	9	28	336.5341300538691	1006.5805607618073	3	336.5339660644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTKEKKIGF_	REV__ENSG00000110844|ENST00000548825|PRPF40B;REV__nc|ENSG00000110844|Q6NWY9-2|PRPF40B;REV__nc|ENSG00000110844|Q6NWY9-3|PRPF40B;REV__nc|ENSG00000110844|Q6NWY9|PRPF40B	21.9598887501803	0.5980208138527809	1				NaN	NaN	0	NaN	7426	6169	13595
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13641	43.12	NaN	1079.3	30	0	131.77	0.144	+			6036	AVMGAYVLLK	10	33	532.8126692515962	1063.6107855699922	2	532.8132934570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVMGAYVLLK_	ENSG00000166562|ENST00000587834|SEC11C;ENST00000591406.1_1_18:56822908-56825914:+|nuORF	31.954861631926434	0.6188749698950511	1				NaN	NaN	0	NaN	7428	6211	13640
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13651	43.169	NaN	1376.5	30	0	147.67	0.144	+			6037	AVMGAYVLLK	10	39	532.8126692515962	1063.6107855699922	2	532.8124389648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVMGAYVLLK_	ENSG00000166562|ENST00000587834|SEC11C;ENST00000591406.1_1_18:56822908-56825914:+|nuORF	29.14955571784316	0.6417842315402807	1				NaN	NaN	0	NaN	7429	6220	13650
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13674	43.285	NaN	1935.8	30	0	316.51	0.144	+			47952	VSMLNVYLK	9	55	533.8023419947077	1065.5901310562153	2	533.802978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSMLNVYLK_	ENSG00000111775|ENST00000229379|COX6A1;ENST00000550009.1_1_12:120875908-120876378:+|nuORF	63.53385203322761	0.18415635464017938	1				NaN	NaN	0	NaN	7431	6241	13673
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13679	43.302	NaN	2234.9	30	0	281.39	0.138				-1	 	0	48	338.19345012482955	674.3723473164591	2	338.1934814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7433	6244	13678
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13690	43.353	NaN	2888.4	30	0	256.88	0.214	+			11445	FMKTKTVSLQ	10	66	591.8295951480048	NaN	0	591.8298950195312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FMKTKTVSLQ_	ENSG00000174502|ENST00000367135|SLC26A9;nc|ENSG00000174502|Q7LBE3-2|SLC26A9;SLC26A9|p.T608Pfs*62|1|0.36|ENSG00000174502|chr1:205921800-205921800|G/-|frameshift_variant	52.936696900407355	0.28703625529470256	1				NaN	NaN	0	NaN	7435	6253	13689
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13691	43.356	NaN	1030.2	30	0	598.86	0.031				-1	 	0	26	346.7064320802925	691.398311227385	2	346.7069091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7436	6253	13689
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13714	43.467	NaN	1734.6	30	0	269.42	0.142	+			14281	GSVLLFVTK	9	43	482.29749275677284	962.5804325803457	2	482.297119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSVLLFVTK_	ENSG00000198231|ENST00000389924|DDX42;ENST00000578593.1_1_17:61889231-61895755:+|nuORF;nc|ENSG00000198231|Q86XP3-2|DDX42	56.43379154798735	0.2433427591689151	1				NaN	NaN	0	NaN	7438	6274	13713
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13718	43.483	NaN	1333.5	30	0	199.42	0.143	+			18261	IPDTIVVVAG	10	33	492.2928161621094	NaN	0	492.2928161621094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IPDTIVVVAG_	ENSG00000134571|ENST00000545968|MYBPC3;nc|ENSG00000134571|Q14896-2|MYBPC3	37.15910966729921	0.3781637092648983	1				NaN	NaN	0	NaN	7439	6277	13717
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13749	43.641	NaN	37759	30	0	4514.5	0.138				-1	 	0	93	316.18032883266915	630.3461047321383	2	316.1806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7440	6307	13748
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13757	43.674	NaN	4450.1	30	0	3751.5	0.214				-1	 	0	31	324.6936074919527	647.3726620507055	2	324.693603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7442	6313	13756
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13758	43.677	NaN	737.27	30	0	67.836	0.03				-1	 	0	34	338.19345012482955	674.3723473164591	2	338.1935119628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7443	6313	13756
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13773	43.741	NaN	1201.7	30	0	249.7	0.143	+			43337	TGATLYLLR	9	28	336.53412832502187	1006.5805555752656	3	336.5345153808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TGATLYLLR_	ENSG00000189043|ENST00000339600|NDUFA4;ENST00000486007.1_1_7:10977674-10979684:-|nuORF;NDUFA4|p.A37T|1|0.4|ENSG00000189043|chr7:10938830-10938830|C/T|missense_variant	18.324413293986947	0.6112419832031293	1				NaN	NaN	0	NaN	7446	6325	13772
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13777	43.757	NaN	2857.3	30	0	307.72	0.145			+	51416	YTSRMNLYK	9	61	588.2958374023438	NaN	0	588.2958374023438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YTSRMNLYK_	REV__ENSG00000265808|ENST00000578049|SEC22B	35.61828744233558	0.29773779453147337	1				NaN	NaN	0	NaN	7447	6328	13776
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13814	43.946	NaN	989.28	30	0	79.96	0.14				-1	 	0	40	391.72662353515625	NaN	0	391.72662353515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7448	6364	13813
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13836	44.056	NaN	1608.2	30	0	152.09	0.143			+	-1	RGKWMNKL	8	45	524.7891248225766	1047.563696711953	2	524.7890014648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_RGKWM(Oxidation (M))NKL_	REV__CON__P02676	47.91560031466742	0.6071945918984287	1				NaN	NaN	0	NaN	7449	6385	13835
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13846	44.103	NaN	2157.6	30	0	222	0.143	+			4610	ATLLIFANK	9	50	495.80257333310783	989.5905937330157	2	495.80224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATLLIFANK_	ENSG00000213465|ENST00000246747|ARL2	129.68262048586715	0.015338143639892752	1				NaN	NaN	0	NaN	7450	6394	13845
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13850	44.12	NaN	1409	30	0	319.95	0.143				-1	ASMKKVKSL	9	34	336.53420560873866	NaN	0	336.86883544921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ASM(Oxidation (M))KKVKSL_	ENST00000369426.9_1_1:119575536-119588262:-|nuORF	25.57405402267927	0.3484490411150625	1				NaN	NaN	0	NaN	7451	6397	13849
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13918	44.47	NaN	1137.5	30	0	233.69	0.214			+	14409	GTAPLVILSH	10	29	336.5341935577969	1006.5807512735907	3	336.5343017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTAPLVILSH_	REV__ENST00000444374.1_1_9:92316696-92316852:+|nuORF	20.94693142431847	0.7087701759873708	1				NaN	NaN	0	NaN	7453	6463	13917
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13919	44.473	NaN	1823.7	30	0	332.96	0.037	+			11397	FLPCLLCYPP	10	54	583.2918090820312	NaN	0	583.2918090820312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FLPCLLCYPP_	ENSG00000164056|ENST00000651917|SPRY1	35.200714571348534	0.3845941098745963	1				NaN	NaN	0	NaN	7454	6463	13917
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13953	44.648	NaN	2411.1	30	0	463.35	0.144				-1	RCNAPRPSPG	10	53	556.2741372966577	1110.5337216601154	2	556.7770385742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_RC(Carbamidomethyl (C))NAPRPSPG_	ENST00000519640.5_1_8:38758877-38775429:+|nuORF	36.446750945000026	0.5818864909973037	1				NaN	NaN	0	NaN	7455	6496	13952
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13957	44.664	NaN	1292.8	30	0	86.982	0.138				-1	 	0	44	338.1934539885588	674.3723550439177	2	338.1934814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7456	6499	13956
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	13980	44.776	NaN	1200.1	30	0	174.71	0.139				-1	 	0	45	360.20658250407416	718.3986120749483	2	360.2071228027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7458	6520	13979
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14017	44.964	NaN	1805.9	30	0	201.58	0.143	+			2095	ALFLTLTTK	9	51	504.3102642785027	1006.6059756238054	2	504.3099365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ALFLTLTTK_	ENSG00000198712|ENST00000361739|MT-CO2	71.87747018426188	0.13267044672804276	1				NaN	NaN	0	NaN	7459	6556	14016
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14027	45.012	NaN	4259	30	0	391.46	0.138				-1	 	0	63	338.193466748063	674.372380562926	2	338.1933898925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7460	6565	14026
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14058	45.169	NaN	1642.5	30	0	1158.3	0.139				-1	 	0	40	346.7067161301601	691.3988793271202	2	346.7068786621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7461	6595	14057
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14068	45.217	NaN	523.23	30	0	120.44	0.214				-1	 	0	28	285.16195582593406	568.3093587186681	2	285.16180419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7462	6604	14067
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14069	45.22	NaN	1665.8	30	0	131.91	0.044			+	-1	WWFRFMRNPLR	11	54	825.9260864257812	NaN	0	825.9260864257812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))WWFRFMRNPLR_	REV__ENST00000509297.5_1_5:135469529-135469610:+|nuORF	18.262085536374414	0.456735970842152	1				NaN	NaN	0	NaN	7463	6604	14067
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14073	45.234	NaN	370.92	30	0	83.853	0.214				-1	 	0	32	241.135758077071	480.256963220942	2	241.13568115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7464	6607	14072
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14074	45.238	NaN	750.74	30	0	79.766	0.106			+	29672	PGQGKGPG	8	41	349.1851028213754	NaN	0	349.1850280761719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PGQGKGPG_	REV__ENST00000514014.1_1_4:40546450-40632592:-|nuORF	23.036711822280957	1.7418937515398478	1				NaN	NaN	0	NaN	7465	6607	14072
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14075	45.24	NaN	419.9	30	0	38.585	0.028	+			1487	AFPGLSVP	8	35	263.1488542947152	NaN	0	263.14886474609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AFPGLSVP_	ENST00000586944.5_1_19:806325-806721:+|nuORF	18.324413293986947	1.7418937515398478	1				NaN	NaN	0	NaN	7466	6607	14072
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14082	45.269	NaN	743.37	30	0	226.76	0.135				-1	 	0	30	219.1226645902535	NaN	0	219.1226348876953	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7467	6613	14081
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14086	45.286	NaN	857.34	30	0	64.58	0.214				-1	 	0	42	350.172571797806	698.330590662412	2	350.17254638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7468	6616	14085
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14087	45.289	NaN	1990.2	30	0	237.19	0.03	+			50199	WLRSATGR	8	52	316.18024663046583	NaN	0	316.1801452636719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WLRSATGR_	ENST00000356956.5_2_6:160526248-160526377:+|nuORF	19.359975847455235	1.7418937515398478	1				NaN	NaN	0	NaN	7469	6616	14085
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14100	45.35	NaN	44457	30	0	5384.4	0.138				-1	 	0	95	338.193466748063	674.372380562926	2	338.1934814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7470	6628	14099
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14119	45.445	NaN	78032	30	0	12358	0.138				-1	 	0	74	318.1960399389471	634.3775269446942	2	318.19622802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7471	6646	14118
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14126	45.477	NaN	7788.8	30	0	6740.5	0.138				-1	 	0	43	326.7093779931006	651.4042030530012	2	326.7093200683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7472	6652	14125
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14170	45.699	NaN	1866.1	30	0	200.55	0.138				-1	 	0	46	338.193466748063	674.372380562926	2	338.1935729980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7474	6694	14169
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14177	45.732	NaN	1735.5	30	0	89.005	0.149	+			11307	FKTRWLMYWYR	11	68	825.4244095789902	NaN	0	825.4243774414062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FKTRWLMYWYR_	INPP1|p.L52Rfs*11|1|0.32|ENSG00000151689|chr2:190360253-190360254|-/CT|frameshift_variant	2.718429308559148	0.456735970842152	1				NaN	NaN	0	NaN	7475	6700	14176
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14185	45.765	NaN	1385.1	30	0	479.44	0.141			+	35882	SEEMPCGF	8	37	450.16710099404884	898.3196490548977	2	450.1675109863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEEMPCGF_	REV__ENSG00000072195|ENST00000312358|SPEG;REV__nc|ENSG00000072195|Q15772-1|SPEG;REV__SPEG|p.M1971Wfs*268|1|0.31|ENSG00000072195|chr2:219483369-219483369|C/-|frameshift_variant;REV__SPEG|p.P2584Qfs*35|1|0.09|ENSG00000072195|chr2:219488198-219488198|C/-|frameshift_variant;REV__SPEG|p.Q2233Rfs*6|2|0.25|ENSG00000072195|chr2:219484154-219484154|C/-|frameshift_variant;REV__SPEG|p.R1307Gfs*12|1|0.34|ENSG00000072195|chr2:219472303-219472303|C/-|frameshift_variant;REV__SPEG|p.R2315Qfs*8|1|0.31|ENSG00000072195|chr2:219484399-219484400|-/C|frameshift_variant;REV__SPEG|p.R3177Pfs*3|1|0.2|ENSG00000072195|chr2:219492170-219492171|-/G|frameshift_variant;REV__SPEG|p.S1915Vfs*324|1|0.21|ENSG00000072195|chr2:219483200-219483200|C/-|frameshift_variant	28.2542754592877	0.7411748056684583	1				NaN	NaN	0	NaN	7477	6706	14184
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14192	45.798	NaN	2102.9	30	0	504.3	0.144			+	-1	VCEARSLTL	9	50	545.7816890229271	1089.5488251126542	2	545.7830200195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))VC(Carbamidomethyl (C))EARSLTL_	REV__ENST00000317552.8_1_X:10588512-10588584:-|nuORF	47.657333605630114	0.33044192980041115	1				NaN	NaN	0	NaN	7478	6712	14191
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14208	45.879	NaN	861.52	30	0	128.01	0.144			+	12087	GAAPLQLAIGP	11	30	336.53428521786793	NaN	0	336.5343933105469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GAAPLQLAIGP_	REV__ENST00000370526.3_1_X:140270480-140270732:-|nuORF	17.364965105453717	0.456735970842152	1				NaN	NaN	0	NaN	7479	6727	14207
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14245	46.073	NaN	667.78	30	0	67.409	0.138			+	11848	FTAPPRAPR	9	33	338.1934814453125	NaN	0	338.1934814453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FTAPPRAPR_	REV__ENST00000514698.5_1_4:980866-997838:+|nuORF;REV__nc|ENSG00000127415|P35475-2|IDUA	17.364965105453717	0.37820932774828947	1				NaN	NaN	0	NaN	7480	6763	14244
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14252	46.107	NaN	688.83	30	0	46.304	0.139				-1	 	0	44	360.2066721009822	718.3987912687644	2	360.2064514160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7481	6769	14251
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14259	46.14	NaN	1189.1	30	0	104.68	0.14				-1	 	0	46	382.2198416893392	762.4251304454784	2	382.21978759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7482	6775	14258
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14272	46.204	NaN	1524.2	30	0	959.59	0.14			+	25098	LLPANGVP	8	31	390.7328893030303	NaN	0	390.7326354980469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LLPANGVP_	REV__ENSG00000153827|ENST00000675903|TRIP12;REV__ENST00000461189.1_1_2:230659893-230661399:-|nuORF;REV__nc|ENSG00000153827|Q14669-2|TRIP12;REV__nc|ENSG00000153827|Q14669-3|TRIP12;REV__nc|ENSG00000153827|Q14669-4|TRIP12;REV__nc|ENSG00000153827|Q14669|TRIP12;REV__TRIP12|p.H1434Afs*2|1|0.16|ENSG00000153827|chr2:229791143-229791144|-/T|frameshift_variant;REV__TRIP12|p.Y1552Lfs*6|1|0.12|ENSG00000153827|chr2:229787620-229787621|-/A|frameshift_variant	21.70233525837049	1.7418937515398478	1				NaN	NaN	0	NaN	7483	6787	14271
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14276	46.22	NaN	914.02	30	0	191.65	0.143			+	43474	TGPALHTIVV	10	30	336.53421221702797	NaN	0	336.5343017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TGPALHTIVV_	REV__ENSG00000153048|ENST00000311052|CARHSP1	16.473147378115264	0.4201028297492154	1				NaN	NaN	0	NaN	7484	6790	14275
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14289	46.286	NaN	2567.8	30	0	208.53	0.143			+	24823	LISKLDEGL	9	50	494.2893934228472	986.5642339124944	2	494.7906188964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LISKLDEGL_	REV__ENSG00000090432|ENST00000264198|MUL1	54.776311868738084	0.25715957988447635	1				NaN	NaN	0	NaN	7485	6802	14288
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14317	46.434	NaN	1756	30	0	150.05	0.139				-1	 	0	53	360.20670505328457	718.3988571733692	2	360.20660400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7486	6829	14316
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14321	46.45	NaN	1917.3	30	0	160.82	0.214				-1	 	0	48	360.20670505328457	718.3988571733692	2	360.2065124511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7487	6832	14320
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14322	46.454	NaN	1555.8	30	0	105.49	0.044			+	-1	WWFRFMRNPLR	11	74	825.92578125	NaN	0	825.92578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))WWFRFMRNPLR_	REV__ENST00000509297.5_1_5:135469529-135469610:+|nuORF	2.718429308559148	0.456735970842152	1				NaN	NaN	0	NaN	7488	6832	14320
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14340	46.533	NaN	573.88	30	0	38.759	0.138	+			25080	LLLYANRR	8	30	340.2090892846498	NaN	0	340.2089538574219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LLLYANRR_	ENSG00000070018|ENST00000261349|LRP6;LRP6|p.F536Rfs*10|1|0.06|ENSG00000070018|chr12:12165235-12165236|-/GCTTTCT|frameshift_variant;LRP6|p.N38Wfs*23|1|0.37|ENSG00000070018|chr12:12244598-12244599|TT/-|frameshift_variant	11.511019455917149	1.7418937515398478	1				NaN	NaN	0	NaN	7491	6847	14339
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14344	46.549	NaN	1047.9	30	0	264.03	0.143			+	17429	IATLSKIVF	9	32	496.3121643066406	NaN	0	496.3121643066406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IATLSKIVF_	REV__ENST00000508935.1_1_5:102509577-102509760:+|nuORF	16.473147378115264	0.38122769658151995	1				NaN	NaN	0	NaN	7492	6850	14343
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14358	46.615	NaN	2306.3	30	0	1730.9	0.139				-1	 	0	35	368.720008251615	735.42546357003	2	368.71990966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7494	6862	14357
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14362	46.631	NaN	704.27	30	0	66.115	0.138				-1	 	0	35	338.1935425990068	674.3725322648136	2	338.1932067871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7495	6865	14361
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14378	46.71	NaN	959.31	30	0	181.01	0.142	+			4304	ATGILGAVFK	10	37	488.7949769035072	975.5754008738144	2	488.7951965332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATGILGAVFK_	ENSG00000127324|ENST00000247829|TSPAN8;ENST00000552128.2_1_12:71519116-71532942:-|nuORF	31.529811441608018	0.6223461015008678	1				NaN	NaN	0	NaN	7496	6880	14377
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14394	46.789	NaN	19013	30	0	2164.7	0.139				-1	 	0	86	360.20670505328457	718.3988571733692	2	360.2066955566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7497	6895	14393
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14410	46.868	NaN	37042	30	0	4555.3	0.214				-1	 	0	73	340.2092018223383	678.4038507114766	2	340.2090759277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7498	6910	14409
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14411	46.871	NaN	2265	30	0	1346.7	0.031				-1	 	0	31	348.7224924002029	695.4304318672058	2	348.7223815917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7499	6910	14409
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14418	46.901	NaN	173.55	30	0	23.134	0.214				-1	 	0	16	221.13845058869083	440.2623482441817	2	221.1383819580078	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7500	6916	14417
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14419	46.905	NaN	911.47	30	0	205.11	0.106				-1	 	0	38	243.1514429317581	NaN	0	243.15151977539062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7501	6916	14417
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14420	46.907	NaN	685.48	30	0	179.66	0.027				-1	 	0	31	199.12532328404367	NaN	0	199.1251983642578	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7502	6916	14417
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14424	46.921	NaN	1160.6	30	0	102.41	0.149			+	-1	HRFRCVRRFCR	11	55	825.4255860815945	NaN	0	825.42578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_HRFRC(Carbamidomethyl (C))VRRFC(Carbamidomethyl (C))R_	REV__ENSG00000215817|ENST00000651890|ZC3H11B;REV__nc|ENSG00000214558|P0DQW0|ZC3H11C	5.55782384252955	0.456735970842152	1				NaN	NaN	0	NaN	7503	6919	14423
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14440	46.999	NaN	2432.8	30	0	275.65	0.145				-1	 	0	61	696.4378376691118	695.4305612025117	1	696.4401245117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7504	6934	14439
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14468	47.142	NaN	786.85	30	0	66.749	0.139				-1	 	0	38	360.20670505328457	718.3988571733692	2	360.206298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7505	6961	14467
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14487	47.241	NaN	922.99	30	0	161.23	0.143			+	43777	TLIRVFAST	9	31	336.5342373845664	NaN	0	336.53411865234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TLIRVFAST_	REV__tr|U7STN1|U7STN1_FUSNU23SrRNA(-C5)-methyltransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01407PE=3SV=1	17.364965105453717	0.37820932774828947	1				NaN	NaN	0	NaN	7506	6979	14486
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14494	47.274	NaN	963.79	30	0	244.3	0.14	+			11155	FGKRPPPKRL	10	43	399.2505527214145	NaN	0	399.2505187988281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FGKRPPPKRL_	RBPJ|p.E11K|1|0.16|ENSG00000168214|chr4:26320787-26320787|G/A|missense_variant	16.006774744331256	0.4201028297492154	1				NaN	NaN	0	NaN	7507	6985	14493
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14519	47.402	NaN	1086.3	30	0	124.55	0.14				-1	 	0	42	404.2329236170298	806.4512943008597	2	404.2321472167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7508	7009	14518
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14542	47.514	NaN	826.52	30	0	51.536	0.214	+			46961	VKGSKSSA	8	42	382.2196691369035	762.4247853406071	2	382.2198486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VKGSKSSA_	ENSG00000135439|ENST00000547588|AGAP2;nc|ENSG00000135439|Q99490|AGAP2	23.04248740728303	0.7814162927298575	1				NaN	NaN	0	NaN	7510	7030	14541
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14543	47.518	NaN	549.68	30	0	76.358	0.035			+	-1	LSLAMKLKP	9	32	508.81109110821245	NaN	0	508.8109436035156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LSLAM(Oxidation (M))KLKP_	REV__ENST00000487532.5_1_1:45424435-45452248:-|nuORF	26.69291269510374	0.34280015626154364	1				NaN	NaN	0	NaN	7511	7030	14541
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14594	47.773	NaN	998.47	30	0	181.92	0.143	+			33636	RLVVNNHR	8	34	336.5342373845664	NaN	0	336.53424072265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RLVVNNHR_	ENSG00000106327|ENST00000223051|TFR2;ENST00000462090.5_1_7:100225070-100228611:-|nuORF;ENST00000465294.5_1_7:100225070-100228611:-|nuORF;ENST00000476304.5_1_7:100218482-100231271:-|nuORF;nc|ENSG00000106327|Q9UP52-2|TFR2;nc|ENSG00000106327|Q9UP52-3|TFR2;TFR2|p.R396Q|1|0.38|ENSG00000106327|chr7:100630972-100630972|C/T|missense_variant;TFR2|p.R704Tfs*88|1|0.29|ENSG00000106327|chr7:100626789-100626790|-/T|frameshift_variant	28.2542754592877	1.7418937515398478	1				NaN	NaN	0	NaN	7514	7078	14593
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14598	47.789	NaN	719.68	30	0	55.935	0.139	+			25111	LLPPVAGG	8	39	362.22221839409957	NaN	0	362.2220458984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LLPPVAGG_	ENSG00000066827|ENST00000377838|ZFAT;nc|ENSG00000066827|Q9P243-2|ZFAT;nc|ENSG00000066827|Q9P243-3|ZFAT;nc|ENSG00000066827|Q9P243-4|ZFAT	24.504012794735996	1.7418937515398478	1				NaN	NaN	0	NaN	7515	7081	14597
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14626	47.932	NaN	1574.3	30	0	1012.2	0.14				-1	 	0	36	390.73316880594587	779.4517846786918	2	390.73309326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7516	7108	14625
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14630	47.949	NaN	9992.3	30	0	892.51	0.14				-1	 	0	73	382.2199111612143	762.4252693892287	2	382.2196960449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7517	7111	14629
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14655	48.076	NaN	574.9	30	0	36.054	0.139	+			13415	GLGGGVIF	8	34	360.2066222498107	NaN	0	360.206298828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GLGGGVIF_	ENSG00000099998|ENST00000327365|GGT5;GGT5|p.H174Mfs*36|1|0.37|ENSG00000099998|chr22:24232900-24232900|C/-|frameshift_variant;GGT5|p.I96S|1|0.1|ENSG00000099998|chr22:24233891-24233891|A/C|missense_variant;nc|ENSG00000099998|P36269-2|GGT5;nc|ENSG00000099998|P36269-3|GGT5	16.704963439144045	1.7418937515398478	1				NaN	NaN	0	NaN	7518	7135	14654
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14662	48.108	NaN	943.09	30	0	201.91	0.143				-1	ASMKKVKSL	9	38	336.53419584319306	NaN	0	336.5339660644531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ASM(Oxidation (M))KKVKSL_	ENST00000369426.9_1_1:119575536-119588262:-|nuORF	20.94693142431847	0.3660861156085067	1				NaN	NaN	0	NaN	7519	7141	14661
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14669	48.141	NaN	2350.3	30	0	373.41	0.139				-1	 	0	47	362.2223796482367	722.4302063632734	2	362.2221374511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7520	7147	14668
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14694	48.267	NaN	153.05	30	0	49.256	0.135				-1	 	0	13	221.13842026232354	NaN	0	221.13841247558594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7521	7171	14693
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14719	48.394	NaN	551.57	30	0	34.278	0.141	+			25395	LPILIADS	8	39	421.2535782456196	NaN	0	421.25347900390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LPILIADS_	ENSG00000101542|ENST00000262717|CDH20	21.70233525837049	1.7418937515398478	1				NaN	NaN	0	NaN	7522	7195	14718
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14735	48.475	NaN	1072	30	0	207.77	0.143				-1	ASTKKVVMK	9	37	336.53426061733416	NaN	0	336.5340881347656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ASTKKVVM(Oxidation (M))K_	CFAP47|p.F1567Vfs*4|1|0.31|ENSG00000165164|chrX:36098829-36098830|-/G|frameshift_variant;CFAP47|p.H2345Afs*15|1|0.09|ENSG00000165164|chrX:36236809-36236810|-/A|frameshift_variant;CFAP47|p.K734Nfs*6|1|0.13|ENSG00000165164|chrX:35971909-35971909|A/-|frameshift_variant;CFAP47|p.P2326Tfs*34|1|0.26|ENSG00000165164|chrX:36236751-36236752|-/A|frameshift_variant;ENSG00000165164|ENST00000378653|CFAP47;nc|ENSG00000165164|Q6ZTR5-1|CFAP47;nc|ENSG00000165164|Q6ZTR5-2|CFAP47;nc|ENSG00000165164|Q6ZTR5-6|CFAP47	18.262085536374414	0.37517301184500873	1				NaN	NaN	0	NaN	7523	7210	14734
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14739	48.492	NaN	1849.1	30	0	230.3	0.139				-1	 	0	41	362.2223796482367	722.4302063632734	2	362.22216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7524	7213	14738
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14758	48.589	NaN	2760.7	30	0	594.96	0.145				-1	FPLFMAVYKVC	11	65	687.8532867433004	NaN	0	687.8528442382812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_FPLFMAVYKVC(Carbamidomethyl (C))_	ENSG00000167588|ENST00000301149|GPD1;nc|ENSG00000167588|P21695-2|GPD1	20.94693142431847	0.456735970842152	1				NaN	NaN	0	NaN	7525	7231	14757
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14762	48.605	NaN	2270.9	30	0	194.05	0.141	+			29643	PGKHRTVG	8	55	426.246158101904	850.477763270608	2	426.2456359863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PGKHRTVG_	ENST00000486327.6_1_19:47884337-47884637:+|nuORF	19.359975847455235	0.7988239741663654	1				NaN	NaN	0	NaN	7526	7234	14761
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14772	48.653	NaN	1537.9	30	0	164.34	0.145				-1	QWLRVRESP	9	39	606.8270539037588	NaN	0	606.8270263671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))QWLRVRESP_	ENSG00000133466|ENST00000337843|C1QTNF6	19.1035232394073	0.3723251548669699	1				NaN	NaN	0	NaN	7527	7243	14771
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14776	48.67	NaN	1239.1	30	0	169.25	0.142			+	18020	IIKSCPLPS	9	39	479.277235020503	NaN	0	479.2773742675781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IIKSCPLPS_	REV__ENSG00000176485|ENST00000415826|PLAAT3;REV__ENST00000394613.3_1_11:63342419-63381578:-|nuORF	30.503639358989545	0.3235605894931338	1				NaN	NaN	0	NaN	7528	7246	14775
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14780	48.687	NaN	937.2	30	0	178.99	0.141			+	9891	EQLLLVPG	8	29	434.7592187501465	NaN	0	434.7591247558594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EQLLLVPG_	REV__ENST00000443185.6_1_18:74154456-74154642:-|nuORF	9.47055586587303	1.741893751539848	1				NaN	NaN	0	NaN	7529	7249	14779
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14808	48.831	NaN	623.61	30	0	57.517	0.139			+	17696	IELNPLMLP	9	31	347.1985508860076	NaN	0	347.1989440917969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IELNPLMLP_	REV__ENSG00000185958|ENST00000327337|FAM186A;REV__FAM186A|p.K681Nfs*7|1|0.11|ENSG00000185958|chr12:50354789-50354789|T/-|frameshift_variant;REV__FAM186A|p.K741Rfs*10|1|0.13|ENSG00000185958|chr12:50354610-50354610|T/-|frameshift_variant;REV__FAM186A|p.K754Rfs*2|2|0.18|ENSG00000185958|chr12:50354571-50354571|T/-|frameshift_variant;REV__FAM186A|p.M1001Nfs*25|1|0.32|ENSG00000185958|chr12:50353830-50353831|-/T|frameshift_variant	19.996771675451527	0.3693019437812985	1				NaN	NaN	0	NaN	7530	7276	14807
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14812	48.847	NaN	1058.6	30	0	186.29	0.144			+	15786	GVTVLFPFK	9	25	336.5342812027463	NaN	0	336.5343322753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVTVLFPFK_	REV__ENSG00000129317|ENST00000344862|PUS7L;REV__PUS7L|p.K220*|1|0.31|ENSG00000129317|chr12:43754588-43754589|-/A|frameshift_variant	14.864876125193954	0.3866709117995958	1				NaN	NaN	0	NaN	7531	7279	14811
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14837	48.974	NaN	914.82	30	0	180.01	0.15	+			26899	LWVSLKLL	8	29	486.31718973300747	NaN	0	486.3168640136719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LWVSLKLL_	DOCK5|p.S612Kfs*4|1|0.33|ENSG00000147459|chr8:25325472-25325473|-/C|frameshift_variant;ENSG00000147459|ENST00000276440|DOCK5	15.641811463095205	1.7418937515398478	1				NaN	NaN	0	NaN	7532	7303	14836
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14841	48.99	NaN	1273.9	30	0	128.23	0.143	+			50138	WIQLLFQV	8	48	523.8051655281707	NaN	0	523.8057861328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WIQLLFQV_	ENSG00000151388|ENST00000504830|ADAMTS12;nc|ENSG00000151388|P58397-3|ADAMTS12	27.882242232435846	1.7418937515398478	1				NaN	NaN	0	NaN	7533	7306	14840
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14848	49.023	NaN	1360.5	30	0	223.89	0.143			+	16679	HINLTKYI	8	50	501.29027514989076	NaN	0	501.29095458984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HINLTKYI_	REV__ADAM7|p.L594Yfs*29|2|0.18|ENSG00000069206|chr8:24493162-24493162|T/-|frameshift_variant;REV__ENSG00000069206|ENST00000175238|ADAM7	24.20275056022122	1.7418937515398478	1				NaN	NaN	0	NaN	7534	7312	14847
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14867	49.119	NaN	534.7	30	0	83.52	0.142				-1	 	0	22	467.193451698765	932.37235046433	2	467.1925048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7535	7330	14866
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14871	49.135	NaN	2079.9	30	0	160.33	0.214				-1	 	0	61	404.23303368946125	806.4515144457225	2	404.2326965332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7536	7333	14870
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14872	49.138	NaN	1396.4	30	0	222.24	0.034			+	31302	QIIGKNER	8	45	479.277235020503	NaN	0	479.277099609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QIIGKNER_	REV__ENST00000503065.1_1_5:39269751-39270728:-|nuORF	29.14955571784316	1.7418937515398478	1				NaN	NaN	0	NaN	7537	7333	14870
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14879	49.168	NaN	2163.5	30	0	1298.5	0.14				-1	 	0	40	412.74642788341345	823.4783028336269	2	412.74615478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7538	7339	14878
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14886	49.2	NaN	1036.1	30	0	221.6	0.143	+			21538	KNSSLLAKF	9	35	336.5343422983716	1006.5811974953149	3	336.5342712402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KNSSLLAKF_	tr|U7SW10|U7SW10_FUSNU23SrRNApseudouridine955/2504/2580synthaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01414PE=3SV=1	23.04248740728303	0.5879033540491928	1				NaN	NaN	0	NaN	7539	7345	14885
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14893	49.232	NaN	879.79	30	0	77.056	0.214			+	-1	ELGDAGPVC	9	39	459.20408323543114	NaN	0	459.20404052734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_ELGDAGPVC(Carbamidomethyl (C))_	REV__ENSG00000160323|ENST00000355699|ADAMTS13;REV__ENST00000485925.5_1_9:136305545-136324175:+|nuORF;REV__nc|ENSG00000160323|Q76LX8-3|ADAMTS13;REV__nc|ENSG00000160323|Q76LX8|ADAMTS13	18.324413293986947	0.3749620627292244	1				NaN	NaN	0	NaN	7540	7351	14892
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14894	49.235	NaN	1007.9	30	0	117.07	0.106				-1	MSDCTSYC	8	33	491.65202726686994	NaN	0	491.6516418457031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))SDCTSYC(Carbamidomethyl (C))_	ENST00000358780.9_2_11:95520836-95522562:-|nuORF;ENST00000538316.1_1_11:95520836-95522077:-|nuORF;ENST00000545654.5_1_11:95520836-95521746:-|nuORF	14.664097394203935	1.7418937515398478	1				NaN	NaN	0	NaN	7541	7351	14892
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14895	49.237	NaN	292.84	30	0	25.081	0.106				-1	DECVEGCAC	9	26	329.10662841796875	NaN	0	329.10662841796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_DECVEGC(Carbamidomethyl (C))AC_	ENSG00000188162|ENST00000399397|OTOG;nc|ENSG00000188162|Q6ZRI0|OTOG;OTOG|p.Q1138Rfs*24|1|0.12|ENSG00000188162|chr11:17594130-17594130|C/-|frameshift_variant	10.265252068803164	0.4022383999429647	1				NaN	NaN	0	NaN	7542	7351	14892
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14896	49.239	NaN	3409.5	30	0	316.7	0.106				-1	VCDPEDGQCPC	11	67	640.222547620352	1278.4305423075039	2	640.7245483398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_VCDPEDGQC(Carbamidomethyl (C))PC(Carbamidomethyl (C))_	CELSR2|p.P2879Lfs*14|1|0.28|ENSG00000143126|chr1:109273557-109273557|C/-|frameshift_variant;CELSR2|p.V2215Wfs*26|2|0.42|ENSG00000143126|chr1:109269115-109269115|C/-|frameshift_variant;ENSG00000143126|ENST00000271332|CELSR2	13.45404412870281	0.8074920481021843	1				NaN	NaN	0	NaN	7543	7351	14892
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14897	49.241	NaN	2625.3	30	0	310.47	0.106			+	-1	AADLMWDCHC	10	57	632.2333957648938	1262.4522385965874	2	632.73486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))AADLMWDC(Carbamidomethyl (C))HC_	REV__ENST00000361193.7_2_17:78226526-78226595:+|nuORF	11.511019455917149	0.7579564031639042	1				NaN	NaN	0	NaN	7544	7351	14892
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14898	49.243	NaN	3152	30	0	243.26	0.106			+	-1	RAWCCCCCCTP	11	73	653.2081812344023	1304.4018095356046	2	653.707763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_RAWC(Carbamidomethyl (C))CCCCCTP_	REV__ENSG00000177685|ENST00000525077|CRACR2B;REV__ENST00000526531.1_1_11:830548-831706:+|nuORF;REV__ENST00000527763.5_1_11:829331-831706:+|nuORF	9.705651100619752	0.8250432705525658	1				NaN	NaN	0	NaN	7545	7351	14892
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14899	49.244	NaN	3346.3	30	0	186.37	0.049			+	-1	RDCMEGNNCSC	11	68	681.2227783203125	NaN	0	681.2227783203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C),Oxidation (M)	_RDC(Carbamidomethyl (C))M(Oxidation (M))EGNNCSC(Carbamidomethyl (C))_	REV__ENSG00000120156|ENST00000380036|TEK;REV__TEK|p.E624Nfs*33|1|0.41|ENSG00000120156|chr9:27197556-27197556|G/-|frameshift_variant;REV__TEK|p.N809Tfs*21|1|0.22|ENSG00000120156|chr9:27206639-27206639|A/-|frameshift_variant;REV__TEK|p.N884Kfs*6|1|0.16|ENSG00000120156|chr9:27209197-27209197|C/-|frameshift_variant;REV__TEK|p.P417Lfs*10|1|0.71|ENSG00000120156|chr9:27185547-27185547|C/-|frameshift_variant;REV__TEK|p.S586Vfs*12|1|0.27|ENSG00000120156|chr9:27197441-27197441|A/-|frameshift_variant	15.333111300571575	0.456735970842152	1				NaN	NaN	0	NaN	7546	7351	14892
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14903	49.259	NaN	715.73	30	0	253.97	0.14	+			25030	LLHAFRIRAV	10	24	399.2505527214145	NaN	0	399.25103759765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LLHAFRIRAV_	ENSG00000168811|ENST00000699704|IL12A;ENST00000468862.5_1_3:159711454-159713343:+|nuORF	8.235088202721068	0.4201028297492154	1				NaN	NaN	0	NaN	7547	7354	14902
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14911	49.291	NaN	2196.9	30	0	442.54	0.143			+	6741	CCCSCTFCI	9	41	491.65202726686994	NaN	0	491.65155029296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CCCSCTFCI_	REV__ENSG00000164054|ENST00000296444|SHISA5;REV__ENST00000460758.1_1_3:48511100-48514492:-|nuORF;REV__ENST00000465449.5_1_3:48510508-48514931:-|nuORF;REV__ENST00000466424.5_1_3:48509548-48511229:-|nuORF;REV__ENST00000494854.5_1_3:48510739-48514492:-|nuORF;REV__nc|ENSG00000164054|Q8N114-2|SHISA5;REV__nc|ENSG00000164054|Q8N114-3|SHISA5;REV__nc|ENSG00000164054|Q8N114-4|SHISA5;REV__nc|ENSG00000164054|Q8N114-5|SHISA5	12.959181472943097	0.3931207604263714	1				NaN	NaN	0	NaN	7549	7360	14910
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14915	49.307	NaN	3883.5	30	0	367.01	0.212				-1	GCDTQMIYDM	10	68	633.229223160325	1264.4438933874499	2	633.2288208007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),2 Oxidation (M)	_GC(Carbamidomethyl (C))DTQM(Oxidation (M))IYDM(Oxidation (M))_	ENSG00000170289|ENST00000320005|CNGB3;nc|ENSG00000170289|Q9NQW8-2|CNGB3	15.641811463095205	0.7369665665077569	1				NaN	NaN	0	NaN	7550	7363	14914
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14916	49.311	NaN	3320.3	30	0	251.73	0.106			+	-1	CWFCCCCCH	9	64	668.1888818189644	NaN	0	668.1878051757812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	4 Carbamidomethyl (C)	_C(Carbamidomethyl (C))WFCC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))CH_	REV__ENST00000316660.6_1_18:57570359-57570470:+|nuORF	8.822329726475273	0.4071219895973803	1				NaN	NaN	0	NaN	7551	7363	14914
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14917	49.313	NaN	2373.1	30	0	333.86	0.038				-1	RMAWPLMCC	9	55	621.2489093430667	1240.4832657529332	2	621.2481079101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term),Carbamidomethyl (C),2 Oxidation (M)	_(Acetyl (Protein N-term))RM(Oxidation (M))AWPLM(Oxidation (M))CC(Carbamidomethyl (C))_	ENST00000502875.1_1_4:141565212-141565266:-|nuORF	25.450171626174864	0.5654022654467333	1				NaN	NaN	0	NaN	7552	7363	14914
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14921	49.327	NaN	1823.7	30	0	263.32	0.214			+	-1	SDCKGCHC	8	49	483.66284211387864	NaN	0	483.66265869140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_SDC(Carbamidomethyl (C))KGC(Carbamidomethyl (C))HC_	REV__ENSG00000131808|ENST00000533718|FSHB;REV__FSHB|p.D108N|1|0.36|ENSG00000131808|chr11:30233732-30233732|G/A|missense_variant	20.481830146152948	1.741893751539848	1				NaN	NaN	0	NaN	7553	7366	14920
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14922	49.33	NaN	6236.1	30	0	454.04	0.039			+	-1	EDSMDGCDNDF	11	81	660.7040385069125	NaN	0	660.7039794921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_EDSM(Oxidation (M))DGC(Carbamidomethyl (C))DNDF_	REV__ENSG00000137642|ENST00000260197|SORL1;REV__SORL1|p.F2103Lfs*44|1|0.22|ENSG00000137642|chr11:121625218-121625218|T/-|frameshift_variant;REV__SORL1|p.M1581Cfs*34|2|0.28|ENSG00000137642|chr11:121605196-121605196|A/-|frameshift_variant	23.52269567125451	0.456735970842152	1				NaN	NaN	0	NaN	7554	7366	14920
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14926	49.344	NaN	3413.9	30	0	375.58	0.212			+	30150	PSDDEEEDDED	11	69	647.7068676449285	NaN	0	647.7057495117188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PSDDEEEDDED_	REV__ENSG00000145725|ENST00000358359|PPIP5K2;REV__nc|ENSG00000145725|O43314-2|PPIP5K2;REV__PPIP5K2|p.L906Cfs*40|1|0.19|ENSG00000145725|chr5:103177941-103177941|T/-|frameshift_variant;REV__PPIP5K2|p.V1179Yfs*3|2|0.15|ENSG00000145725|chr5:103194934-103194934|A/-|frameshift_variant	14.137123925751023	0.456735970842152	1				NaN	NaN	0	NaN	7555	7369	14925
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14927	49.348	NaN	3158.9	30	0	389.92	0.106				-1	CCPACCISSCC	11	72	660.7040385069125	NaN	0	660.7041625976562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	4 Carbamidomethyl (C)	_C(Carbamidomethyl (C))C(Carbamidomethyl (C))PAC(Carbamidomethyl (C))CISSC(Carbamidomethyl (C))C_	KRTAP4-3|p.R151C|1|0.2|ENSG00000196156|chr17:41167722-41167722|G/A|missense_variant	15.641811463095205	0.456735970842152	1				NaN	NaN	0	NaN	7556	7369	14925
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14928	49.35	NaN	1323.7	30	0	191.46	0.106				-1	CDGDTDCMDS	10	37	539.145081121443	NaN	0	539.146240234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_CDGDTDCM(Oxidation (M))DS_	ENSG00000123384|ENST00000243077|LRP1;LRP1|p.D1283Ifs*50|1|0.09|ENSG00000123384|chr12:57175962-57175962|G/-|frameshift_variant;LRP1|p.D1366Rfs*54|1|0.17|ENSG00000123384|chr12:57177143-57177144|-/CA|frameshift_variant;LRP1|p.R3469Gfs*24|2|0.38|ENSG00000123384|chr12:57201552-57201552|C/-|frameshift_variant	3.159230865173134	0.4201028297492154	1				NaN	NaN	0	NaN	7557	7369	14925
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14929	49.352	NaN	4916.9	30	0	290.28	0.106			+	-1	DDDEDDDDEMD	11	73	672.6819458007812	NaN	0	672.6819458007812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_DDDEDDDDEM(Oxidation (M))D_	REV__ENSG00000103351|ENST00000576634|CLUAP1;REV__nc|ENSG00000103351|Q96AJ1-2|CLUAP1	5.921104790170933	0.456735970842152	1				NaN	NaN	0	NaN	7558	7369	14925
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14930	49.354	NaN	1622.8	30	0	156.59	0.106			+	-1	YYSQGCSS	8	38	476.1793518066406	NaN	0	476.1793518066406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_YYSQGC(Carbamidomethyl (C))SS_	REV__ENSG00000142409|ENST00000610935|ZNF787	21.70233525837049	1.7418937515398478	1				NaN	NaN	0	NaN	7559	7369	14925
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14931	49.355	NaN	1370	30	0	199.95	0.035	+			6776	CFCSCHCNC	9	43	510.13531494140625	NaN	0	510.13531494140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_CFCSCHCNC_	ENST00000472558.6_1_12:6657995-6658223:-|nuORF	1.2051539316722666	0.4072763090772754	1				NaN	NaN	0	NaN	7560	7369	14925
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14935	49.369	NaN	2152.1	30	0	232.05	0.213				-1	MHMPTTMEDF	10	54	628.2433187168799	1254.4720845005597	2	628.2422485351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))HMPTTMEDF_	ENSG00000186625|ENST00000367411|KATNA1	30.503639358989545	0.6307262373768582	1				NaN	NaN	0	NaN	7561	7372	14934
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14936	49.373	NaN	3684.3	30	0	201.84	0.04				-1	MCTGCCCCCCA	11	65	685.6661987304688	NaN	0	685.6661987304688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term),4 Carbamidomethyl (C)	_(Acetyl (Protein N-term))MC(Carbamidomethyl (C))TGC(Carbamidomethyl (C))CC(Carbamidomethyl (C))C(Carbamidomethyl (C))CCA_	ENST00000562592.5_1_16:57770947-57775680:+|nuORF	2.718429308559148	0.456735970842152	1				NaN	NaN	0	NaN	7562	7372	14934
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14940	49.387	NaN	3410	30	0	216.07	0.145			+	-1	HCGDCIPDDLP	11	58	621.2489093430667	1240.4832657529332	2	621.7495727539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_HCGDC(Carbamidomethyl (C))IPDDLP_	REV__ENST00000273146.6_1_3:43020947-43074030:+|nuORF;REV__ENST00000418093.2_1_3:42980387-43074030:+|nuORF	19.1035232394073	0.7810393085260824	1				NaN	NaN	0	NaN	7563	7375	14939
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14944	49.403	NaN	2122.5	30	0	1241.9	0.14				-1	 	0	42	392.7489277402614	783.4833025473229	2	392.74871826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7564	7378	14943
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14948	49.419	NaN	19674	30	0	2674.6	0.214				-1	 	0	87	384.23567420979475	766.4567954863895	2	384.7370910644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7565	7381	14947
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14949	49.423	NaN	3798.9	30	0	469.5	0.106				-1	PGGSCQECECD	11	63	649.7084774573265	NaN	0	649.7090454101562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	3 Carbamidomethyl (C)	_PGGSC(Carbamidomethyl (C))QEC(Carbamidomethyl (C))EC(Carbamidomethyl (C))D_	ENSG00000196569|ENST00000421865|LAMA2;LAMA2|p.A2665Cfs*4|1|0.15|ENSG00000196569|chr6:129491988-129491989|-/G|frameshift_variant;LAMA2|p.A2876Pfs*27|1|0.18|ENSG00000196569|chr6:129505272-129505272|A/-|frameshift_variant;LAMA2|p.A2876Sfs*30|1|0.32|ENSG00000196569|chr6:129505271-129505272|-/A|frameshift_variant;LAMA2|p.M2985Wfs*8|1|0.15|ENSG00000196569|chr6:129512453-129512453|A/-|frameshift_variant;LAMA2|p.N1765Mfs*26|1|0.4|ENSG00000196569|chr6:129393101-129393101|A/-|frameshift_variant;LAMA2|p.V2281Cfs*12|1|0.36|ENSG00000196569|chr6:129456464-129456465|-/T|frameshift_variant	14.137123925751023	0.456735970842152	1				NaN	NaN	0	NaN	7566	7381	14947
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14950	49.425	NaN	3301.1	30	0	299.59	0.039			+	-1	AQYMGHDCNCM	11	66	644.7124514824828	NaN	0	644.712646484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_AQYM(Oxidation (M))GHDCNCM_	REV__ENSG00000080298|ENST00000617270|RFX3;REV__nc|ENSG00000080298|P48380-2|RFX3;REV__RFX3|p.L614Qfs*4|1|0.12|ENSG00000080298|chr9:3248156-3248160|CGTAA/-|frameshift_variant	14.137123925751023	0.456735970842152	1				NaN	NaN	0	NaN	7567	7381	14947
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14957	49.455	NaN	1913.3	30	0	1054.3	0.214				-1	 	0	31	467.193451698765	932.37235046433	2	467.1925354003906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7568	7387	14956
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14958	49.458	NaN	847.47	30	0	156.93	0.031			+	2802	ARTMLAVIIP	10	37	362.2221975781976	NaN	0	362.2221374511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ARTMLAVIIP_	REV__PDSS1|p.A145T|1|0.35|ENSG00000148459|chr10:26709734-26709734|G/A|missense_variant	22.579656572578934	0.4201028297492154	1				NaN	NaN	0	NaN	7569	7387	14956
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14962	49.472	NaN	811.61	30	0	77.134	0.14	+			29972	PPAGRGRP	8	39	404.23303368946125	806.4515144457225	2	404.2328186035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PPAGRGRP_	ENST00000320580.8_1_11:66010778-66011036:+|nuORF;REV__ENSG00000125944|ENST00000302271|HNRNPR;REV__HNRNPR|p.W594Gfs*15|1|0.23|ENSG00000125944|chr1:23310575-23310576|CA/-|frameshift_variant;REV__nc|ENSG00000125944|O43390-2|HNRNPR;REV__nc|ENSG00000125944|O43390-3|HNRNPR;REV__nc|ENSG00000125944|O43390-4|HNRNPR	13.775330524044264	0.789990904165365	1				NaN	NaN	0	NaN	7570	7390	14961
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14966	49.489	NaN	1145.4	30	0	111.58	0.141			+	34663	RVRLDLGG	8	46	443.2672364585737	884.5199199839474	2	443.2666320800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVRLDLGG_	REV__ENSG00000184292|ENST00000371225|TACSTD2	35.200714571348534	0.6875396545722289	1				NaN	NaN	0	NaN	7571	7393	14965
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14970	49.505	NaN	4199.7	30	0	432.66	0.145				-1	SNCTSNGMECM	11	70	653.7090454101562	NaN	0	653.7090454101562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C),Oxidation (M)	_SNC(Carbamidomethyl (C))TSNGM(Oxidation (M))EC(Carbamidomethyl (C))M_	ENSG00000107518|ENST00000355044|ATRNL1	12.206681093483082	0.456735970842152	1				NaN	NaN	0	NaN	7572	7396	14969
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14977	49.536	NaN	852.25	30	0	166.69	0.144			+	15631	GVLFAIIQF	9	22	336.53417717634494	NaN	0	336.53448486328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVLFAIIQF_	REV__ENSG00000116729|ENST00000262348|WLS;REV__nc|ENSG00000116729|Q5T9L3-2|WLS;REV__nc|ENSG00000116729|Q5T9L3-3|WLS	20.94693142431847	0.3660861156085067	1				NaN	NaN	0	NaN	7573	7402	14976
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14987	49.584	NaN	7116	30	0	441.69	0.212			+	-1	CPCQGDEPDCV	11	73	640.222547620352	1278.4305423075039	2	640.2219848632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))PC(Carbamidomethyl (C))QGDEPDCV_	REV__CELSR2|p.P2879Lfs*14|1|0.28|ENSG00000143126|chr1:109273557-109273557|C/-|frameshift_variant;REV__CELSR2|p.V2215Wfs*26|2|0.42|ENSG00000143126|chr1:109269115-109269115|C/-|frameshift_variant;REV__ENSG00000143126|ENST00000271332|CELSR2	30.317721548370564	0.6717830234747728	1				NaN	NaN	0	NaN	7574	7411	14986
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14988	49.587	NaN	2903.5	30	0	667.16	0.106			+	-1	NVLMKLAI	8	48	459.27957216483554	NaN	0	459.2048034667969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_NVLM(Oxidation (M))KLAI_	REV__OR8K1|p.P85L|2|0.11|ENSG00000150261|chr11:56346292-56346292|C/T|missense_variant	28.2542754592877	1.7418937515398478	1				NaN	NaN	0	NaN	7575	7411	14986
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14989	49.589	NaN	6625.4	30	0	381.71	0.106			+	-1	CSPQCCSSDCT	11	77	652.7044677734375	NaN	0	652.7044677734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	3 Carbamidomethyl (C)	_CSPQC(Carbamidomethyl (C))C(Carbamidomethyl (C))SSDC(Carbamidomethyl (C))T_	REV__ENSG00000188581|ENST00000306271|KRTAP1-1;REV__KRTAP1-1|p.C133Afs*4|1|0.57|ENSG00000188581|chr17:41041002-41041002|G/-|frameshift_variant	22.579656572578934	0.456735970842152	1				NaN	NaN	0	NaN	7576	7411	14986
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14990	49.591	NaN	4898.3	30	0	614.46	0.106				-1	CIDDCVTGNPS	11	63	590.734619140625	NaN	0	590.734619140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_C(Carbamidomethyl (C))IDDCVTGNPS_	ENSG00000162804|ENST00000310397|SNED1;nc|ENSG00000162804|Q8TER0-3|SNED1;nc|ENSG00000162804|Q8TER0-4|SNED1;nc|ENSG00000162804|Q8TER0-5|SNED1;SNED1|p.C661Afs*7|1|0.18|ENSG00000162804|chr2:241052361-241052361|C/-|frameshift_variant;SNED1|p.R1289Gfs*59|1|0.09|ENSG00000162804|chr2:241073313-241073313|C/-|frameshift_variant	22.579656572578934	0.456735970842152	1				NaN	NaN	0	NaN	7577	7411	14986
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14991	49.593	NaN	3134.3	30	0	467.7	0.035				-1	GCNCCCRCC	9	55	511.1314697265625	NaN	0	511.1314697265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_GC(Carbamidomethyl (C))NCCCRCC_	ENSG00000183067|ENST00000380588|IGSF5	12.206847966760668	0.39566704307768535	1				NaN	NaN	0	NaN	7578	7411	14986
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	14995	49.607	NaN	1557.8	30	0	79.619	0.143			+	50197	WLRRGRAS	8	54	501.2908759498539	1000.5671989665078	2	501.2896423339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WLRRGRAS_	REV__ENST00000433555.1_2_3:9883921-9885645:-|nuORF;REV__ENST00000433972.1_1_3:9885183-9885729:-|nuORF	21.9598887501803	0.7897753010812679	1				NaN	NaN	0	NaN	7579	7414	14994
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15014	49.701	NaN	1682.1	30	0	129.43	0.141			+	15990	HALRQGTL	8	53	448.25941306288775	894.5042731925755	2	448.2596740722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HALRQGTL_	REV__ENSG00000118873|ENST00000358951|RAB3GAP2;REV__ENST00000491005.5_1_1:220324899-220327342:-|nuORF	24.20275056022122	0.7724576178584145	1				NaN	NaN	0	NaN	7580	7432	15013
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15036	49.811	NaN	608.22	30	0	49.56	0.139			+	-1	PKAVGKVCIL	10	41	362.2221975781976	NaN	0	362.2222595214844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_PKAVGKVC(Carbamidomethyl (C))IL_	REV__ZNF836|p.K194Nfs*68|1|0.29|ENSG00000196267|chr19:52157101-52157101|T/-|frameshift_variant	16.71738777980365	0.4201028297492154	1				NaN	NaN	0	NaN	7581	7453	15035
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15043	49.843	NaN	1616.6	30	0	357.45	0.142				-1	MYMGKNTG	8	42	467.1932678222656	NaN	0	467.1932678222656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_M(Oxidation (M))YM(Oxidation (M))GKNTG_	ENSG00000180011|ENST00000322342|PTGR3;nc|ENSG00000180011|Q8N4Q0-2|PTGR3	26.79610172149135	1.7418937515398478	1				NaN	NaN	0	NaN	7582	7459	15042
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15059	49.922	NaN	1484	30	0	170.2	0.144			+	-1	LKRLTTSAAS	10	52	545.317026215453	1088.6194994977059	2	545.3162231445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LKRLTTSAAS_	REV__ENST00000299824.5_1_20:37518279-37524238:+|nuORF	19.996771675451527	0.7148376616046445	1				NaN	NaN	0	NaN	7583	7474	15058
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15066	49.954	NaN	1657.1	30	0	281.64	0.143				-1	LLMKFCLL	8	49	519.297744722179	1036.580936511158	2	519.2980346679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_LLMKFC(Carbamidomethyl (C))LL_	ENSG00000153093|ENST00000439055|ACOXL;ENST00000443586.5_1_2:111806820-111858723:+|nuORF;nc|ENSG00000153093|Q9NUZ1-2|ACOXL;nc|ENSG00000153093|Q9NUZ1|ACOXL	57.452649787351945	0.526999880452039	1				NaN	NaN	0	NaN	7584	7480	15065
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15070	49.97	NaN	1114.1	30	0	90.382	0.143	+			12005	FVVIFITY	8	50	501.2903006878312	NaN	0	501.2909851074219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FVVIFITY_	ENSG00000198513|ENST00000358385|ATL1;nc|ENSG00000198513|Q8WXF7-2|ATL1	23.04248740728303	1.7418937515398478	1				NaN	NaN	0	NaN	7585	7483	15069
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15077	50.002	NaN	1223.5	30	0	86.562	0.143	+			46763	VGTDKLRVTG	10	53	523.3041324340005	1044.593711934801	2	523.3031005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VGTDKLRVTG_	ENSG00000102683|ENST00000218867|SGCG	19.1035232394073	0.7193765342308498	1				NaN	NaN	0	NaN	7586	7489	15076
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15081	50.018	NaN	628.52	30	0	102.43	0.214	+			25065	LLLGPLGE	8	33	406.2483090478135	NaN	0	406.24896240234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LLLGPLGE_	ENSG00000185215|ENST00000560869|TNFAIP2	16.704963439144045	1.7418937515398478	1				NaN	NaN	0	NaN	7587	7492	15080
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15082	50.022	NaN	1032.6	30	0	208.21	0.035	+			1691	AGTLLQHLR	9	34	336.86866301316263	NaN	0	336.8686828613281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AGTLLQHLR_	ENSG00000181350|ENST00000470794|LRRC75A;nc|ENSG00000181350|Q8NAA5-2|LRRC75A	24.519189625965996	0.35377483217337163	1				NaN	NaN	0	NaN	7588	7492	15080
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15107	50.147	NaN	829.95	30	0	45.519	0.139	+			25077	LLLPLAARMS	10	41	362.2221975781976	NaN	0	362.2225646972656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LLLPLAARMS_	nc|ENSG00000091436|Q9NYL2-2|MAP3K20	16.71738777980365	0.4201028297492154	1				NaN	NaN	0	NaN	7589	7516	15106
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15136	50.293	NaN	2138.3	30	0	167.17	0.141				-1	 	0	59	426.2463382076806	850.4781234821612	2	426.24591064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7591	7543	15135
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15146	50.341	NaN	1227.3	30	0	124.01	0.143	+			9430	EKKKANQLS	9	51	523.3041324340005	1044.593711934801	2	523.8060913085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EKKKANQLS_	ENSG00000178115|ENST00000562783|GOLGA8Q;ENSG00000186399|ENST00000327271|GOLGA8R;ENSG00000206127|ENST00000509311|GOLGA8O;ENSG00000232653|ENST00000448387|GOLGA8N	15.641811463095205	0.6112419832031292	1				NaN	NaN	0	NaN	7592	7552	15145
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15150	50.357	NaN	2344.2	30	0	1212.6	0.141				-1	 	0	46	434.759508643742	867.504464354284	2	435.26104736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7593	7555	15149
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15169	50.454	NaN	1089.7	30	0	193.64	0.143	+			44211	TRKFRGSR	8	32	336.5341951765655	NaN	0	336.8687438964844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TRKFRGSR_	ENST00000523861.1_1_8:120584407-120592491:-|nuORF;nc|ENSG00000136960|Q13822-3|ENPP2	23.04248740728303	1.7418937515398478	1				NaN	NaN	0	NaN	7594	7573	15168
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15185	50.536	NaN	1765.9	30	0	350.47	0.214				-1	 	0	41	406.2488682885964	810.4831836439928	2	406.24822998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7595	7588	15184
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15186	50.54	NaN	1484.4	30	0	94.836	0.034	+			36641	SGLAKRLAN	9	52	465.2803404035434	928.5461278738868	2	465.2795104980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SGLAKRLAN_	ENSG00000168116|ENST00000370733|KIAA1586;KIAA1586|p.S537Qfs*20|1|0.31|ENSG00000168116|chr6:57054105-57054105|T/-|frameshift_variant;nc|ENSG00000168116|Q9HCI6-2|KIAA1586	19.996771675451527	0.6112419832031292	1				NaN	NaN	0	NaN	7596	7588	15184
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15190	50.554	NaN	927.81	30	0	109.64	0.144	+			3837	ATAKRGRSRS	10	41	545.3171320068507	NaN	0	545.318603515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATAKRGRSRS_	ENSG00000167978|ENST00000301740|SRRM2;nc|ENSG00000167978|Q9UQ35-2|SRRM2;SRRM2|p.P2670Lfs*13|1|0.08|ENSG00000167978|chr16:2769268-2769268|C/-|frameshift_variant	31.529811441608018	0.39664753963064203	1				NaN	NaN	0	NaN	7597	7591	15189
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15194	50.571	NaN	2913.7	30	0	1683.7	0.214				-1	 	0	36	414.7621275985994	827.5097022639989	2	414.7613525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7598	7594	15193
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15195	50.575	NaN	410.79	30	0	68.561	0.031				-1	 	0	30	362.2223067281893	722.4300605231787	2	362.2220764160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7599	7594	15193
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15217	50.683	NaN	2297.2	30	0	253.31	0.214	+			47308	VNSGFAKRVR	10	61	567.330113857018	1132.6456747808359	2	567.33056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VNSGFAKRVR_	ENSG00000121621|ENST00000263181|KIF18A	14.864876125193954	0.7409144161711139	1				NaN	NaN	0	NaN	7600	7615	15216
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15218	50.687	NaN	2263.4	30	0	311.83	0.035	+			2404	APALPPSAPPK	11	56	523.3042312931321	NaN	0	523.3043212890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_APALPPSAPPK_	ENSG00000112419|ENST00000440869|PHACTR2;nc|ENSG00000112419|O75167|PHACTR2;PHACTR2|p.L340Sfs*4|2|0.36|ENSG00000112419|chr6:143765608-143765609|-/C|frameshift_variant;PHACTR2|p.N196Ifs*80|2|0.28|ENSG00000112419|chr6:143760559-143760559|A/-|frameshift_variant;PHACTR2|p.N196Kfs*7|1|0.25|ENSG00000112419|chr6:143760558-143760559|-/A|frameshift_variant;PHACTR2|p.P339Lfs*30|1|0.33|ENSG00000112419|chr6:143765609-143765609|C/-|frameshift_variant;PHACTR2|p.T229Qfs*47|1|0.32|ENSG00000112419|chr6:143765277-143765277|A/-|frameshift_variant	19.1035232394073	0.456735970842152	1				NaN	NaN	0	NaN	7601	7615	15216
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15237	50.781	NaN	1017.6	30	0	99.066	0.142			+	13687	GPKPVRQTG	9	43	470.27249994808545	938.5304469629709	2	470.2722473144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GPKPVRQTG_	REV__ENSG00000169181|ENST00000447459|GSG1L;REV__nc|ENSG00000169181|Q6UXU4-3|GSG1L	26.69291269510374	0.5537881896960711	1				NaN	NaN	0	NaN	7602	7633	15236
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15250	50.846	NaN	797.27	30	0	99.866	0.144	+			20178	KEKVTQKF	8	36	336.53423771420995	NaN	0	336.5340576171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEKVTQKF_	ENSG00000128815|ENST00000325239|WDFY4;nc|ENSG00000128815|Q6ZS81-4|WDFY4;nc|ENSG00000128815|Q6ZS81-5|WDFY4	20.481830146152948	1.741893751539848	1				NaN	NaN	0	NaN	7603	7645	15249
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15257	50.878	NaN	1628.6	30	0	151.91	0.14				-1	 	0	45	406.2488682885964	810.4831836439928	2	406.2485656738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7604	7651	15256
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15261	50.895	NaN	1471.6	30	0	93.305	0.144	+			28574	NKIDQLIVF	9	59	545.3170321649654	NaN	0	545.316162109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NKIDQLIVF_	ENSG00000054654|ENST00000555002|SYNE2;ENST00000394768.6_2_14:64542710-64692241:+|nuORF;ENST00000554805.6_2_14:64676062-64692241:+|nuORF;ENST00000555022.5_2_14:64671104-64692241:+|nuORF;nc|ENSG00000054654|Q8WXH0-10|SYNE2;nc|ENSG00000054654|Q8WXH0-13|SYNE2;nc|ENSG00000054654|Q8WXH0-3|SYNE2;nc|ENSG00000054654|Q8WXH0-4|SYNE2;nc|ENSG00000054654|Q8WXH0-7|SYNE2;nc|ENSG00000054654|Q8WXH0|SYNE2;SYNE2|p.S6651Rfs*83|1|0.29|ENSG00000054654|chr14:64220596-64220597|-/G|frameshift_variant	20.94693142431847	0.3660861156085067	1				NaN	NaN	0	NaN	7605	7654	15260
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15286	51.025	NaN	1280.2	30	0	208.97	0.145	+			24611	LGRRLPADHV	10	45	567.330113857018	1132.6456747808359	2	567.3291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LGRRLPADHV_	ENSG00000138411|ENST00000644978|HECW2;HECW2|p.G1392Vfs*19|1|0.22|ENSG00000138411|chr2:196220913-196220913|C/-|frameshift_variant;HECW2|p.R1017Gfs*19|1|0.33|ENSG00000138411|chr2:196278614-196278614|G/-|frameshift_variant;HECW2|p.V922*|1|0.28|ENSG00000138411|chr2:196306539-196306539|G/-|frameshift_variant	14.864876125193954	0.7409144161711139	1				NaN	NaN	0	NaN	7606	7678	15285
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15305	51.122	NaN	1252.8	30	0	196.92	0.145			+	30017	PPLSLQGPRGR	11	43	589.3438720703125	NaN	0	589.3438720703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PPLSLQGPRGR_	REV__ENST00000609803.2_1_12:46121133-46121556:-|nuORF	16.71738777980365	0.456735970842152	1				NaN	NaN	0	NaN	7607	7696	15304
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15327	51.237	NaN	2042.2	30	0	181.44	0.144	+			28943	NRRRFLLD	8	66	545.3168107976696	1088.6190686621392	2	545.3169555664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NRRRFLLD_	ENSG00000076003|ENST00000264156|MCM6;MCM6|p.A186V|1|0.23|ENSG00000076003|chr2:135868669-135868669|G/A|missense_variant;MCM6|p.K365Nfs*6|1|0.23|ENSG00000076003|chr2:135862732-135862732|T/-|frameshift_variant;MCM6|p.R771Efs*3|1|0.33|ENSG00000076003|chr2:135844583-135844583|T/-|frameshift_variant	24.20275056022122	0.7724576178584145	1				NaN	NaN	0	NaN	7608	7717	15326
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15352	51.367	NaN	2572.4	30	0	203.74	0.141			+	43903	TNHLRVGV	8	55	448.2592353539205	894.503917774641	2	448.25885009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TNHLRVGV_	REV__ENST00000263026.9_1_16:22296162-22296357:+|nuORF	19.359975847455235	0.7988239741663654	1				NaN	NaN	0	NaN	7609	7741	15351
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15359	51.399	NaN	1489.2	30	0	355.59	0.142			+	32030	QRPRTAAL	8	44	456.7724904282396	911.5304279232793	2	456.7718811035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QRPRTAAL_	REV__ENST00000302754.5_1_19:12902350-12902593:+|nuORF	18.324413293986947	0.7971860551947066	1				NaN	NaN	0	NaN	7610	7747	15358
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15369	51.447	NaN	1203.8	30	0	154.5	0.143	+			18167	ILRIRTSD	8	38	487.293209478694	972.571866024188	2	487.2928161621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ILRIRTSD_	ENSG00000254737|ENST00000641722|OR10G4	18.324413293986947	0.7971860551947066	1				NaN	NaN	0	NaN	7611	7756	15368
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15373	51.463	NaN	1913.5	30	0	362.53	0.145				-1	LLLKEKMMR	9	49	589.343407710379	1176.6722624875579	2	589.3441162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LLLKEKM(Oxidation (M))MR_	ENSG00000093072|ENST00000399837|ADA2	21.9598887501803	0.5980208138527809	1				NaN	NaN	0	NaN	7612	7759	15372
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15380	51.495	NaN	430.47	30	0	43.194	0.214				-1	ALSFTKCSS	9	24	334.16488514112007	NaN	0	334.16485595703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_ALSFTKC(Carbamidomethyl (C))SS_	ENSG00000176208|ENST00000321990|ATAD5	14.137123925751023	0.3891339986947948	1				NaN	NaN	0	NaN	7613	7765	15379
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15381	51.498	NaN	909.7	30	0	169.86	0.035			+	24921	LKQVQTKY	8	33	336.5342311340229	NaN	0	336.534423828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LKQVQTKY_	REV__ENSG00000122417|ENST00000460698|ODF2L;REV__ENST00000463933.5_1_1:86823785-86826204:-|nuORF;REV__ENST00000534092.5_1_1:86824370-86836727:-|nuORF;REV__nc|ENSG00000122417|Q9ULJ1-2|ODF2L;REV__nc|ENSG00000122417|Q9ULJ1-3|ODF2L;REV__nc|ENSG00000122417|Q9ULJ1-5|ODF2L;REV__nc|ENSG00000122417|Q9ULJ1-6|ODF2L;REV__nc|ENSG00000122417|Q9ULJ1|ODF2L	20.481830146152948	1.741893751539848	1				NaN	NaN	0	NaN	7614	7765	15379
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15385	51.512	NaN	961.3	30	0	261.48	0.139			+	312	AAPPPGAA	8	23	326.1761328517266	650.3377127702532	2	326.17633056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAPPPGAA_	REV__ENST00000360947.7_1_14:21561809-21566788:-|nuORF	10.184766708764876	0.7843118145031319	1				NaN	NaN	0	NaN	7615	7768	15384
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15398	51.575	NaN	1721.3	30	0	178.96	0.144	+			18633	ISTISSVRNL	10	59	545.3167131853687	1088.6188734375373	2	545.316650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ISTISSVRNL_	ENSG00000096696|ENST00000379802|DSP;nc|ENSG00000096696|P15924-2|DSP;nc|ENSG00000096696|P15924-3|DSP	17.468008924990375	0.7276870902328821	1				NaN	NaN	0	NaN	7616	7780	15397
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15405	51.608	NaN	6069.5	30	0	746.95	0.214	+			34612	RVPRGLGT	8	56	428.26170466237136	854.5088563915427	2	428.26129150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVPRGLGT_	ENST00000542466.2_1_12:58120838-58121579:+|nuORF	18.324413293986947	0.7971860551947066	1				NaN	NaN	0	NaN	7617	7786	15404
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15406	51.612	NaN	1855.9	30	0	693.3	0.033				-1	 	0	45	436.7749652116502	871.5353774901005	2	436.77423095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7618	7786	15404
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15428	51.72	NaN	2567.4	30	0	559.55	0.145				-1	 	0	65	567.329731814509	566.322455347909	1	567.3302612304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7619	7807	15427
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15444	51.8	NaN	1630.4	30	0	277.24	0.214	+			25585	LQGPRALASA	10	56	492.2852750686236	NaN	0	492.28558349609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LQGPRALASA_	E2F2|p.Q36Pfs*66|1|0.48|ENSG00000007968|chr1:23530687-23530688|-/G|frameshift_variant;ENSG00000007968|ENST00000361729|E2F2	37.50817390946774	0.3770175549877019	1				NaN	NaN	0	NaN	7620	7822	15443
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15445	51.804	NaN	2121.2	30	0	360.65	0.037			+	13174	GHRDLILRTP	10	68	589.343407710379	1176.6722624875579	2	589.3424682617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GHRDLILRTP_	REV__ENSG00000142233|ENST00000270235|NTN5	29.170058357718403	0.6416167986984785	1				NaN	NaN	0	NaN	7621	7822	15443
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15452	51.835	NaN	808.51	30	0	110.17	0.143			+	23579	LALQLGAAGPP	11	32	336.5342105560487	1006.5808022683461	3	336.5341491699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LALQLGAAGPP_	REV__ENST00000405692.2_3_7:558637-559858:-|nuORF	15.641811463095205	0.7972481940378109	1				NaN	NaN	0	NaN	7622	7828	15451
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15477	51.964	NaN	1007.6	30	0	116.58	0.214	+			33886	RRPGLVSA	8	46	428.26170466237136	854.5088563915427	2	428.2615966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RRPGLVSA_	ENSG00000188095|ENST00000341735|MESP2;REV__ENSG00000100985|ENST00000372330|MMP9	13.775330524044264	0.789990904165365	1				NaN	NaN	0	NaN	7623	7852	15476
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15478	51.967	NaN	954.62	30	0	35.709	0.043				-1	MNKRNRRRRER	11	49	807.4537963867188	NaN	0	807.4537963867188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))MNKRNRRRRER_	ENST00000332995.11_1_6:13278505-13278550:+|nuORF	0.8280856835056912	0.456735970842152	1				NaN	NaN	0	NaN	7624	7852	15476
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15497	52.066	NaN	2829	30	0	199.03	0.145				-1	 	0	74	567.3296779857908	1132.6448030383815	2	567.3301391601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7625	7870	15496
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15507	52.115	NaN	572.29	30	0	68.83	0.14			+	33835	RRAGPALA	8	27	406.24819268586924	NaN	0	406.2484436035156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RRAGPALA_	REV__ENST00000281961.2_1_2:39893203-39931290:+|nuORF	14.664097394203935	1.7418937515398478	1				NaN	NaN	0	NaN	7626	7879	15506
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15538	52.282	NaN	2130.1	30	0	254.78	0.145	+			24877	LKGRGSTFRTV	11	66	611.3559774090936	1220.6974018849871	2	611.3567504882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LKGRGSTFRTV_	ENST00000345097.8_1_14:89625883-89626123:-|nuORF	24.231819034082204	0.7356191775841856	1				NaN	NaN	0	NaN	7627	7909	15537
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15548	52.333	NaN	747.77	30	0	143.19	0.143				-1	ASMKKVKSL	9	26	336.53414470072227	NaN	0	336.5340881347656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ASM(Oxidation (M))KKVKSL_	ENST00000369426.9_1_1:119575536-119588262:-|nuORF	14.864876125193954	0.3866709117995958	1				NaN	NaN	0	NaN	7628	7918	15547
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15552	52.35	NaN	1058.7	30	0	114.81	0.143	+			17663	IEKKSGRLS	9	48	509.3063470628317	1016.5981411924635	2	509.3066101074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IEKKSGRLS_	nc|ENSG00000211815|A0A075B6V5|TRAV36DV7	25.57405402267927	0.5642445186134241	1				NaN	NaN	0	NaN	7629	7921	15551
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15559	52.383	NaN	1353.8	30	0	76.336	0.14	+			43691	TKHLRGGG	8	60	413.23804103628976	824.4615291393795	2	413.2378845214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TKHLRGGG_	CYP8B1|p.D134G|2|0.22|ENSG00000180432|chr3:42875416-42875416|T/C|missense_variant	12.959181472943097	0.7887000251064199	1				NaN	NaN	0	NaN	7630	7927	15558
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15566	52.416	NaN	2124.6	30	0	242.2	0.145				-1	 	0	53	567.3296779857908	1132.6448030383815	2	567.33056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7631	7933	15565
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15573	52.449	NaN	1272.7	30	0	355.18	0.142				-1	LLLEILNS	8	30	478.785371496627	NaN	0	478.784912109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LLLEILNS_	ENST00000394036.5_2_10:96341084-96341114:+|nuORF	20.481830146152948	1.741893751539848	1				NaN	NaN	0	NaN	7632	7939	15572
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15580	52.481	NaN	646.58	30	0	95.106	0.14			+	29656	PGLEGLLL	8	38	406.24819268586924	NaN	0	406.2489318847656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PGLEGLLL_	REV__ENSG00000075826|ENST00000370345|SEC31B;REV__ENST00000484848.5_1_10:102255105-102258991:-|nuORF;REV__nc|ENSG00000075826|Q9NQW1-5|SEC31B	28.2542754592877	1.7418937515398478	1				NaN	NaN	0	NaN	7633	7945	15579
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15593	52.546	NaN	2331	30	0	280.74	0.146				-1	 	0	71	589.3429990861559	1176.6714452391118	2	589.8446655273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7634	7957	15592
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15609	52.628	NaN	2919.9	30	0	254.25	0.214			+	29644	PGKNKTVR	8	53	450.274562041579	898.534571149958	2	450.2742004394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PGKNKTVR_	REV__ENST00000444527.2_1_8:56364433-56364982:-|nuORF	35.61828744233558	0.6843154725607303	1				NaN	NaN	0	NaN	7635	7972	15608
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15610	52.631	NaN	1817	30	0	188.59	0.038			+	-1	VKVFCPFLVL	10	64	611.3559774090936	1220.6974018849871	2	611.3567504882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_VKVFC(Carbamidomethyl (C))PFLVL_	REV__ENST00000475582.5_1_2:27591237-27591477:-|nuORF	23.04248740728303	0.69165701907106	1				NaN	NaN	0	NaN	7636	7972	15608
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15617	52.661	NaN	1873.8	30	0	686.19	0.142	+			31445	QKRKAKAS	8	56	458.78777026887985	915.5609876045597	2	458.7877502441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QKRKAKAS_	ENSG00000145901|ENST00000521591|TNIP1;nc|ENSG00000145901|Q15025-2|TNIP1;nc|ENSG00000145901|Q15025-3|TNIP1	14.664097394203935	0.7913966407026132	1				NaN	NaN	0	NaN	7637	7978	15616
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15639	52.773	NaN	1107.4	30	0	124.63	0.145	+			23559	LALCVRILTTY	11	48	633.369384765625	NaN	0	633.369384765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LALCVRILTTY_	ENSG00000164037|ENST00000296422|SLC9B1;ENST00000504216.5_1_4:103822276-103853306:-|nuORF;nc|ENSG00000164037|Q4ZJI4-2|SLC9B1;nc|ENSG00000164037|Q4ZJI4-3|SLC9B1	24.519189625965996	0.45614437233802635	1				NaN	NaN	0	NaN	7638	7999	15638
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15643	52.79	NaN	723.68	30	0	108.88	0.143	+			35093	SAFVRILTT	9	28	336.53404661314073	1006.5803104396223	3	336.5344543457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAFVRILTT_	tr|U7STN1|U7STN1_FUSNU23SrRNA(-C5)-methyltransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01407PE=3SV=1	12.206847966760668	0.6112419832031292	1				NaN	NaN	0	NaN	7639	8002	15642
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15662	52.888	NaN	2971.6	30	0	176.29	0.145				-1	 	0	67	589.3429990861559	1176.6714452391118	2	589.3430786132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7640	8020	15661
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15678	52.969	NaN	722.14	30	0	62.464	0.141	+			28571	NKGLRLAQ	8	34	450.274562041579	898.534571149958	2	450.2732238769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NKGLRLAQ_	ENSG00000164946|ENST00000380880|FREM1;FREM1|p.T1560Qfs*46|1|0.35|ENSG00000164946|chr9:14775969-14775969|C/-|frameshift_variant;nc|ENSG00000164946|Q5H8C1-2|FREM1	12.959181472943097	0.7887000251064199	1				NaN	NaN	0	NaN	7641	8035	15677
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15706	53.114	NaN	2764.5	30	0	225.5	0.145			+	20562	KFRTRLISSSA	11	70	633.3688844981921	1264.723216063184	2	633.3689575195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KFRTRLISSSA_	REV__ENST00000262982.2_1_20:47706183-47706276:+|nuORF	16.71738777980365	0.7922119881075679	1				NaN	NaN	0	NaN	7642	8062	15705
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15722	53.195	NaN	1066.8	30	0	106.95	0.144			+	29909	PLPTLKPAQP	10	52	531.3191444718975	1060.623736010595	2	531.3191528320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PLPTLKPAQP_	REV__ENST00000498539.1_1_7:100174858-100175272:-|nuORF	25.57405402267927	0.6709832231498071	1				NaN	NaN	0	NaN	7643	8077	15721
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15729	53.228	NaN	1574.9	30	0	124.89	0.145	+			18405	IRTTSSLSIIS	11	65	589.3429990861559	1176.6714452391118	2	589.3436889648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IRTTSSLSIIS_	DMD|p.L823Pfs*27|1|0.06|ENSG00000198947|chrX:32491431-32491432|-/AAATTTGTAAG|frameshift_variant	23.52269567125451	0.7430573033454468	1				NaN	NaN	0	NaN	7644	8083	15728
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15739	53.277	NaN	2443.9	30	0	255.51	0.145			+	33908	RRRYSTRRA	9	63	611.3557153838208	1220.6968778344415	2	611.3563842773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RRRYSTRRA_	REV__ENST00000313465.5_2_8:145752728-145753355:-|nuORF;REV__nc|nan|Q6P1X6-2|C8orf82	26.69291269510374	0.5537881896960711	1				NaN	NaN	0	NaN	7645	8092	15738
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15746	53.31	NaN	1512.8	30	0	121.67	0.143				-1	 	0	51	492.28462939403096	982.5547058548619	2	492.28521728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7646	8098	15745
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15768	53.424	NaN	1376.1	30	0	106.27	0.141			+	13236	GIKRPGQN	8	52	435.25095594585105	868.4873589585021	2	435.25048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GIKRPGQN_	REV__ENSG00000184986|ENST00000392519|TMEM121;REV__TMEM121|p.V41M|1|0.19|ENSG00000184986|chr14:105528955-105528955|G/A|missense_variant	25.450171626174864	0.7628259754767981	1				NaN	NaN	0	NaN	7647	8119	15767
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15787	53.522	NaN	2282.2	30	0	183.45	0.214				-1	 	0	53	472.28738765853586	942.5602223838717	2	472.28753662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7648	8137	15786
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15788	53.526	NaN	726.54	30	0	81.375	0.033	+			25078	LLLPPTTT	8	29	428.26152070774117	NaN	0	428.2612609863281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LLLPPTTT_	ENST00000280605.4_1_4:164394333-164394471:-|nuORF	20.481830146152948	1.741893751539848	1				NaN	NaN	0	NaN	7649	8137	15786
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15798	53.571	NaN	2509.4	30	0	817.01	0.142				-1	 	0	56	480.80039392898294	959.5862349247659	2	480.8007507324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7650	8146	15797
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15802	53.587	NaN	3378.8	30	0	490.77	0.145				-1	DSTLIMQLLR	10	66	603.3322143554688	NaN	0	603.3322143554688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_DSTLIM(Oxidation (M))QLLR_	ENSG00000108953|ENST00000264335|YWHAE;ENSG00000128245|ENST00000248975|YWHAH;ENSG00000134308|ENST00000238081|YWHAQ;ENSG00000164924|ENST00000395958|YWHAZ;ENSG00000166913|ENST00000353703|YWHAB;ENSG00000170027|ENST00000307630|YWHAG;ENSG00000175793|ENST00000339276|SFN;ENST00000397492.1_1_22:32346295-32352776:+|nuORF;ENST00000399764.3_1_9:34922183-34922564:-|nuORF;ENST00000479421.5_2_20:43531717-43535076:+|nuORF;ENST00000480304.5_1_8:101936173-101961117:-|nuORF;nc|ENSG00000108953|P62258-2|YWHAE;nc|ENSG00000164924|P63104-2|YWHAZ;nc|ENSG00000166913|P31946-2|YWHAB;nc|ENSG00000175793|P31947-2|SFN	72.87924865735499	0.13450315462291293	1				NaN	NaN	0	NaN	7651	8149	15801
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15809	53.62	NaN	3513.8	30	0	223.36	0.145				-1	 	0	81	611.3557153838208	1220.6968778344415	2	611.3560791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7652	8155	15808
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15837	53.765	NaN	1563.2	30	0	256.71	0.145			+	2793	ARRSHQTAKVR	11	61	655.381831158537	NaN	0	655.380615234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ARRSHQTAKVR_	REV__ENST00000322177.5_1_15:75247781-75248108:-|nuORF	21.780426970141523	0.456735970842152	1				NaN	NaN	0	NaN	7653	8182	15836
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15841	53.781	NaN	924.66	30	0	145.8	0.143			+	51031	YKRETVVL	8	29	336.53434639187407	NaN	0	336.5346984863281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YKRETVVL_	REV__ENSG00000180875|ENST00000318160|GREM2	14.664097394203935	1.7418937515398478	1				NaN	NaN	0	NaN	7654	8185	15840
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15878	53.976	NaN	1847.7	30	0	194.36	0.213				-1	 	0	62	611.3557153838208	1220.6968778344415	2	611.3563842773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7655	8221	15877
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15879	53.98	NaN	1889.7	30	0	271.79	0.036	+			31172	QGLFSKVTLI	10	61	553.3332438696197	NaN	0	553.332275390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QGLFSKVTLI_	ENSG00000109854|ENST00000451739|HTATIP2;nc|ENSG00000109854|Q9BUP3-2|HTATIP2;nc|ENSG00000109854|Q9BUP3-3|HTATIP2	23.52269567125451	0.42010282974921537	1				NaN	NaN	0	NaN	7656	8221	15877
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15892	54.044	NaN	1910.8	30	0	160.45	0.145				-1	MLKGYVVGTKK	11	70	633.3686871736409	1264.7228214140816	2	633.3688354492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))MLKGYVVGTKK_	ENST00000436852.2_1_X:121673097-121673310:+|nuORF	27.047317107675042	0.7060868989289394	1				NaN	NaN	0	NaN	7657	8233	15891
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15923	54.207	NaN	867.67	30	0	314.48	0.14			+	31178	QGLLRSRPIR	10	33	399.2505527214145	NaN	0	399.2503967285156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QGLLRSRPIR_	REV__ENST00000483155.5_1_9:79007484-79008822:-|nuORF	11.096761811581379	0.4201028297492154	1				NaN	NaN	0	NaN	7658	8263	15922
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15927	54.224	NaN	1737.6	30	0	160.65	0.145				-1	DSTLIMQLLR	10	48	603.3301545801955	1204.645756227191	2	603.331298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_DSTLIM(Oxidation (M))QLLR_	ENSG00000108953|ENST00000264335|YWHAE;ENSG00000128245|ENST00000248975|YWHAH;ENSG00000134308|ENST00000238081|YWHAQ;ENSG00000164924|ENST00000395958|YWHAZ;ENSG00000166913|ENST00000353703|YWHAB;ENSG00000170027|ENST00000307630|YWHAG;ENSG00000175793|ENST00000339276|SFN;ENST00000397492.1_1_22:32346295-32352776:+|nuORF;ENST00000399764.3_1_9:34922183-34922564:-|nuORF;ENST00000479421.5_2_20:43531717-43535076:+|nuORF;ENST00000480304.5_1_8:101936173-101961117:-|nuORF;nc|ENSG00000108953|P62258-2|YWHAE;nc|ENSG00000164924|P63104-2|YWHAZ;nc|ENSG00000166913|P31946-2|YWHAB;nc|ENSG00000175793|P31947-2|SFN	44.377184641726394	0.5088115166961078	1				NaN	NaN	0	NaN	7659	8266	15926
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15931	54.24	NaN	846.75	30	0	180.78	0.143			+	21948	KSAIKKGEF	9	27	336.53405241351055	NaN	0	336.5343017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSAIKKGEF_	REV__ENST00000302472.3_1_5:40680251-40680356:+|nuORF	10.865556482863946	0.40020666175442315	1				NaN	NaN	0	NaN	7660	8269	15930
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15941	54.289	NaN	1331.2	30	0	633.86	0.142				-1	 	0	36	453.3430285662289	904.6715041992578	2	453.3439636230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	1				NaN	NaN	0	NaN	7661	8278	15940
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15945	54.306	NaN	1129.6	30	0	153.03	0.143			+	8552	EAVLGRIAAQ	10	45	514.2985260615144	NaN	0	514.2984008789062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EAVLGRIAAQ_	REV__ENSG00000035403|ENST00000211998|VCL;REV__nc|ENSG00000035403|P18206-2|VCL	19.996771675451527	0.4201028297492154	1				NaN	NaN	0	NaN	7662	8281	15944
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15961	54.388	NaN	2842.5	30	0	372.18	0.212	+			23975	LDVIKILSPHM	11	73	633.3686871736409	1264.7228214140816	2	633.3685302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LDVIKILSPHM_	ENST00000528638.1_1_11:77320422-77320536:+|nuORF	19.1035232394073	0.7810393085260824	1				NaN	NaN	0	NaN	7663	8296	15960
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15962	54.392	NaN	1552.5	30	0	133.92	0.034	+			32004	QRKTLPGN	8	49	457.2639949496034	912.5134369660068	2	457.2641296386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QRKTLPGN_	ENST00000394767.2_1_4:105413137-105416015:-|nuORF	23.04248740728303	0.7814162927298575	1				NaN	NaN	0	NaN	7664	8296	15960
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15966	54.407	NaN	844.88	30	0	91.719	0.143			+	49351	VVSQAKRSL	9	40	494.3004593083645	986.586365683529	2	494.3008117675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVSQAKRSL_	REV__ENST00000274473.6_1_5:126791176-126791221:+|nuORF	34.172542307311794	0.4838870758800184	1				NaN	NaN	0	NaN	7665	8299	15965
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15970	54.423	NaN	2222	30	0	156.06	0.146			+	11097	FFFLFVFCSFF	11	58	725.8509698203369	1449.6873867074737	2	725.8524169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FFFLFVFCSFF_	REV__ENST00000216727.8_1_14:23795141-23795348:+|nuORF	21.9598887501803	0.7594498734240387	1				NaN	NaN	0	NaN	7666	8302	15969
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	15977	54.456	NaN	1751.3	30	0	390.93	0.143			+	37039	SIRKKKSAS	9	58	502.81351420965365	1003.6124754861073	2	502.8138427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIRKKKSAS_	REV__ENSG00000163535|ENST00000357799|SGO2;REV__ENST00000469840.1_1_2:201399891-201407862:+|nuORF;REV__ENST00000488636.5_1_2:201399822-201407388:+|nuORF;REV__nc|ENSG00000163535|Q562F6-2|SGO2;REV__nc|ENSG00000163535|Q562F6-3|SGO2	20.94693142431847	0.6074874384046576	1				NaN	NaN	0	NaN	7667	8308	15976
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	16038	54.781	NaN	656.54	30	0	90.332	0.143	+			18169	ILRRTESL	8	33	494.3008117675781	NaN	0	494.3008117675781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ILRRTESL_	ENSG00000162891|ENST00000367098|IL20;nc|ENSG00000162891|Q9NYY1-2|IL20	18.324413293986947	1.7418937515398478	1				NaN	NaN	0	NaN	7668	8368	16037
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	16042	54.797	NaN	1445.4	30	0	168.51	0.145	+			18024	IILMLMAVVF	10	58	575.3450043587603	NaN	0	575.3463745117188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IILMLMAVVF_	tr|U7SNG9|U7SNG9_FUSNUS-adenosylmethionineuptaketransporterOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01752PE=4SV=1	35.200714571348534	0.3845941098745963	1				NaN	NaN	0	NaN	7669	8371	16041
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	16064	54.911	NaN	2366.7	30	0	264.75	0.145	+			46575	VFLSLLPLNFF	11	65	655.3823604005764	NaN	0	655.3824462890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VFLSLLPLNFF_	ABCC6|p.L780Wfs*31|1|0.44|ENSG00000091262|chr16:16178875-16178875|G/-|frameshift_variant;ENSG00000091262|ENST00000205557|ABCC6;ENST00000574094.5_1_16:16275679-16317348:-|nuORF;nc|ENSG00000091262|O95255-3|ABCC6	32.03412808689991	0.42265347483761584	1				NaN	NaN	0	NaN	7670	8392	16063
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	16086	55.026	NaN	1295.8	30	0	117.03	0.149				-1	CQIFLRRCWRE	11	60	812.4066162109375	NaN	0	812.4066162109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))QIFLRRC(Carbamidomethyl (C))WRE_	FAM170B|p.F237Lfs*125|1|0.2|ENSG00000172538|chr10:49131754-49131754|A/-|frameshift_variant	12.811709888998246	0.456735970842152	1				NaN	NaN	0	NaN	7671	8413	16085
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	16093	55.059	NaN	930.72	30	0	69.308	0.14	+			47587	VRPRVAAG	8	48	413.25628926161755	NaN	0	413.25665283203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VRPRVAAG_	ENST00000496425.1_1_20:62373927-62374363:+|nuORF	20.481830146152948	1.741893751539848	1				NaN	NaN	0	NaN	7672	8419	16092
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	16127	55.238	NaN	1538.1	30	0	171.31	0.143			+	20830	KIGRDKLTT	9	53	516.3138238028532	1030.6130946725063	2	516.3139038085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KIGRDKLTT_	REV__tr|U7T5C5|U7T5C5_FUSNUAAA-ATPase-likedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00520PE=4SV=1	21.68575002086885	0.60058278597072	1				NaN	NaN	0	NaN	7673	8452	16126
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	16140	55.304	NaN	1901.6	30	0	413.58	0.214	+			13077	GFLIPLLYI	9	58	524.8270703869107	1047.6395878406213	2	524.8281860351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GFLIPLLYI_	ENST00000262376.10_1_16:4931488-4931788:+|nuORF	21.9598887501803	0.5980208138527809	1				NaN	NaN	0	NaN	7674	8464	16139
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	16141	55.307	NaN	1698.9	30	0	238.43	0.034	+			49262	VVPGGIISLC	10	49	479.27658948587714	956.5386260385543	2	479.2767028808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVPGGIISLC_	ENSG00000124227|ENST00000457363|ANKRD60	25.450171626174864	0.6719948968573018	1				NaN	NaN	0	NaN	7675	8464	16139
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	16172	55.468	NaN	1016.3	30	0	90.093	0.149				-1	WMIERIWCTRR	11	49	811.9076760134839	1621.8007990937676	2	811.9067993164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_WM(Oxidation (M))IERIWC(Carbamidomethyl (C))TRR_	ENST00000571732.5_1_17:1268334-1303424:-|nuORF;ENST00000575977.1_1_17:1268334-1303424:-|nuORF	7.3997283801893845	0.8358403674195289	1				NaN	NaN	0	NaN	7676	8494	16171
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	16212	55.679	NaN	628.61	30	0	86.663	0.143	+			35207	SAKKVYGAAI	10	25	336.53417972332596	NaN	0	336.5344543457031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAKKVYGAAI_	DENND4C|p.F1650Yfs*12|1|0.38|ENSG00000137145|chr9:19358095-19358096|TT/-|frameshift_variant;DENND4C|p.R1677Dfs*12|1|0.24|ENSG00000137145|chr9:19360255-19360255|A/-|frameshift_variant;ENSG00000137145|ENST00000434457|DENND4C;ENST00000380437.8_1_9:19290781-19335045:+|nuORF;nc|ENSG00000137145|Q5VZ89-3|DENND4C;nc|ENSG00000137145|Q5VZ89-5|DENND4C;nc|ENSG00000137145|Q5VZ89|DENND4C	16.473147378115264	0.4201028297492154	1				NaN	NaN	0	NaN	7677	8533	16211
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	16258	56.012	NaN	1395.2	30	0	167.13	0.142			+	18060	IIVVPLTD	8	50	435.26904296875	NaN	0	435.26904296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IIVVPLTD_	REV__ENSG00000170581|ENST00000314128|STAT2;REV__ENST00000556539.5_1_12:56737175-56743495:-|nuORF;REV__nc|ENSG00000170581|P52630-4|STAT2	15.63621529709179	1.7418937515398478	1				NaN	NaN	0	NaN	7678	8578	16257
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	16265	56.045	NaN	2802.5	30	0	346.91	0.144			+	26625	LVAIKRSSTT	10	61	538.3270456079856	1074.6395382827711	2	538.3272094726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LVAIKRSSTT_	REV__ENST00000554272.5_1_12:25215794-25219317:+|nuORF	24.519189625965996	0.6795976720565101	1				NaN	NaN	0	NaN	7679	8584	16264
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	16275	56.094	NaN	2050.5	30	0	186.38	0.144	+			25135	LLRRLRHE	8	64	546.839430767732	1091.6643086022639	2	546.841552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LLRRLRHE_	AluSz_dup98854|chr20:44349788-44350099:+|1.367513856940714|0.2321393134284999|2.56|473.0|6|2|sense	26.79610172149135	0.7524337208463756	1				NaN	NaN	0	NaN	7680	8593	16274
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	16288	56.159	NaN	1993.4	30	0	281.34	0.143			+	9572	ELGQLLLCL	9	60	501.2904951999306	NaN	0	501.29046630859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ELGQLLLCL_	REV__ENST00000553027.1_1_12:49318004-49318058:-|nuORF	24.519189625965996	0.35377483217337163	1				NaN	NaN	0	NaN	7681	8605	16287
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	16397	56.747	NaN	1838.3	30	0	282.1	0.144				-1	LLPFAMKRK	9	62	560.3403804756474	NaN	0	560.3408813476562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LLPFAM(Oxidation (M))KRK_	ENST00000513061.1_1_4:172734932-172737255:+|nuORF	25.450171626174864	0.34907449758287085	1				NaN	NaN	0	NaN	7682	8713	16396
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	16422	56.878	NaN	544.86	30	0	79.491	0.143	+			11157	FGLTMAKKI	9	24	336.86843047152803	NaN	0	336.5343017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FGLTMAKKI_	tr|U7SNP7|U7SNP7_FUSNUDNA-directedDNApolymeraseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01977PE=4SV=1	14.137123925751023	0.3891339986947948	1				NaN	NaN	0	NaN	7683	8737	16421
200727_Lumos_FAIMS_CID_IT_CVSet1_1ul_172T	16435	56.943	NaN	1770.4	30	0	280.09	0.143			+	28932	NRKLISIDS	9	58	523.3040887368421	NaN	0	523.3045043945312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NRKLISIDS_	REV__tr|U7SNI5|U7SNI5_FUSNUSingle-stranded-DNA-specificexonucleaseRecJOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01772PE=3SV=1	29.14955571784316	0.3303970763161698	1				NaN	NaN	0	NaN	7684	8749	16434
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2259	11.575	NaN	521.98	30	0	176.04	0.146	+			23363	KYVPRAILVD	10	21	391.9036560058594	NaN	0	391.9036560058594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KYVPRAILVD_	ENSG00000137267|ENST00000333628|TUBB2A;ENSG00000137285|ENST00000259818|TUBB2B;ENSG00000196230|ENST00000327892|TUBB;ENSG00000258947|ENST00000315491|TUBB3;ENST00000489942.1_1_6:3155224-3157697:-|nuORF;ENST00000518096.1_1_8:30209523-30210210:+|nuORF;TUBB|p.G142Afs*23|1|0.35|ENSG00000196230|chr6:30723483-30723483|G/-|frameshift_variant;TUBB2B|p.D177Hfs*21|1|0.32|ENSG00000137285|chr6:3225559-3225560|TC/-|frameshift_variant	16.006774744331256	0.4201028297492154	2				NaN	NaN	0	NaN	103	2154	2258
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2395	11.908	NaN	1740.9	30	0	662.85	0.143			+	34972	SAAPFASLPR	10	34	508.77886962890625	NaN	0	508.77886962890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAAPFASLPR_	REV__ENST00000316846.2_11:65545618-65547282:-|nuORF	42.396135135203025	0.3536752194735987	2				NaN	NaN	0	NaN	203	2190	2394
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2447	12.03	NaN	1477.4	30	0	175.98	0.149	+			16256	HEENLKTKKQQ	11	45	461.5843471705124	NaN	0	461.5845031738281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HEENLKTKKQQ_	ENSG00000136942|ENST00000348462|RPL35;ENST00000373570.8_1_9:127620199-127620799:-|nuORF;ENST00000433398.1_1_7:66071742-66071856:-|nuORF;ENST00000487431.1_1_9:127620199-127623861:-|nuORF	41.1089822145965	0.37917734110163537	2				NaN	NaN	0	NaN	243	2202	2446
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2460	12.06	NaN	2441.6	30	0	534.44	0.142	+			41614	SVQKSSGVK	9	51	460.2643632516883	918.5141735701766	2	460.2640380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVQKSSGVK_	CALD1|p.S665L|1|0.2|ENSG00000122786|chr7:134958223-134958223|C/T|missense_variant;ENSG00000122786|ENST00000361675|CALD1;ENST00000482470.5_1_7:134552484-134644871:+|nuORF;nc|ENSG00000122786|Q05682-2|CALD1;nc|ENSG00000122786|Q05682-3|CALD1;nc|ENSG00000122786|Q05682-4|CALD1;nc|ENSG00000122786|Q05682-5|CALD1	76.16968421966216	0.11411088698345859	2				NaN	NaN	0	NaN	253	2205	2459
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2558	12.297	NaN	871.03	30	0	210.58	0.142	+			21770	KQSAPVSSK	9	30	466.26458740234375	NaN	0	466.26458740234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KQSAPVSSK_	ENSG00000163349|ENST00000426820|HIPK1;nc|ENSG00000163349|Q86Z02-2|HIPK1;nc|ENSG00000163349|Q86Z02-3|HIPK1;nc|ENSG00000163349|Q86Z02-4|HIPK1	43.650786325866115	0.2504488100985368	2				NaN	NaN	0	NaN	327	2229	2557
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2594	12.383	NaN	5099.7	30	0	4347.4	0.14			+	174	AAKGRGKP	8	24	392.74293811338276	783.4713232935655	2	392.74322509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAKGRGKP_	REV__nc|ENSG00000176510|Q8NH08|OR10AC1	8.231297230196988	0.7812220690224883	2				NaN	NaN	0	NaN	354	2238	2593
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2618	12.439	NaN	2600.3	30	0	338.43	0.144	+			19339	KAKKPAAAGVK	11	53	534.8476674718196	1067.680782010439	2	535.3499145507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAKKPAAAGVK_	ENSG00000184357|ENST00000331442|H1-5	98.58198989935565	0.06364242648159563	2				NaN	NaN	0	NaN	372	2244	2617
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2769	12.795	NaN	3150.5	30	0	1048.9	0.214	+			14346	GTAAKSITKK	10	31	335.54149172257144	NaN	0	335.5415954589844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTAAKSITKK_	ENSG00000133574|ENST00000255945|GIMAP4	45.02220120713402	0.3370728479115332	2				NaN	NaN	0	NaN	490	2277	2768
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2770	12.799	NaN	2851.9	30	0	343.95	0.038				-1	GMCVGEKRKL	10	41	393.21060108156684	NaN	0	393.2108154296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GMC(Carbamidomethyl (C))VGEKRKL_	ENSG00000106080|ENST00000222803|FKBP14;ENST00000479939.1_1_7:30062251-30066124:-|nuORF	33.921630207806714	0.38879399011744475	2				NaN	NaN	0	NaN	491	2277	2768
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2812	12.894	NaN	2852.8	30	0	487.23	0.147			+	9985	ERKKERHHL	9	48	411.57008033188896	1231.688411595867	3	411.57061767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ERKKERHHL_	REV__ENST00000453426.1_1_6:32813264-32813414:+|nuORF	26.69291269510374	0.5537881896960711	2				NaN	NaN	0	NaN	524	2286	2811
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2844	12.966	NaN	2801.4	30	0	1387.7	0.145	+			2806	ARVIHIINAE	10	26	379.22409751799506	1134.6504631541852	3	379.22430419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ARVIHIINAE_	ENSG00000066032|ENST00000402739|CTNNA2;nc|ENSG00000066032|P26232-2|CTNNA2;nc|ENSG00000066032|P26232-3|CTNNA2;nc|ENSG00000066032|P26232-4|CTNNA2;nc|ENSG00000066032|P26232-5|CTNNA2;nc|ENSG00000066032|P26232-6|CTNNA2	20.94693142431847	0.7087701759873708	2				NaN	NaN	0	NaN	550	2292	2843
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2862	13.005	NaN	1004.3	30	0	110.4	0.141	+			29558	PETISAFT	8	37	433.2177734375	NaN	0	433.2177734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PETISAFT_	ENSG00000153107|ENST00000341068|ANAPC1;ENST00000454465.1_1_2:87398353-87423749:+|nuORF	60.29395666154354	1.7418937515398478	2				NaN	NaN	0	NaN	565	2295	2861
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2895	13.077	NaN	2302.4	30	0	1248.7	0.142			+	21240	KLKATNIQ	8	39	458.28480537126677	914.5550578093336	2	458.28497314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KLKATNIQ_	REV__DNAH1|p.L2558P|1|0.41|ENSG00000114841|chr3:52381704-52381704|T/C|missense_variant;REV__ENSG00000114841|ENST00000420323|DNAH1;REV__ENST00000486752.5_1_3:52350520-52422757:+|nuORF;REV__nc|ENSG00000114841|Q9P2D7-6|DNAH1;REV__nc|ENSG00000114841|Q9P2D7-8|DNAH1	82.30502934623384	0.30436709589983096	2				NaN	NaN	0	NaN	592	2301	2894
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2913	13.116	NaN	18783	30	0	2616.1	0.143	+			34339	RTQAAAVQK	9	73	486.7827222405414	971.5508915478828	2	486.78265380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTQAAAVQK_	ARHGAP28|p.F355Lfs*8|2|0.4|ENSG00000088756|chr18:6873514-6873514|T/-|frameshift_variant;ARHGAP28|p.G328Wfs*4|1|0.21|ENSG00000088756|chr18:6873432-6873433|-/T|frameshift_variant;ARHGAP28|p.R364Gfs*7|1|0.08|ENSG00000088756|chr18:6873541-6873541|A/-|frameshift_variant;ENSG00000088756|ENST00000383472|ARHGAP28;ENSG00000146376|ENST00000368149|ARHGAP18;nc|ENSG00000088756|Q9P2N2-2|ARHGAP28;nc|ENSG00000146376|Q8N392-2|ARHGAP18	140.11223852658463	0.010427410095706195	2				NaN	NaN	0	NaN	607	2304	2912
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2929	13.15	NaN	3551.1	30	0	529.44	0.143	+			32972	REDSQRPGA	9	56	508.24932599301184	1014.4840990528237	2	508.25006103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_REDSQRPGA_	chr12:54282662-54282800|482|460.96|0.0|25.46|+|ENST00000677249|HNRNPA1,HNRNPA1;ENSG00000135486|ENST00000340913|HNRNPA1;ENSG00000139675|ENST00000357495|HNRNPA1L2;ENST00000391992.3_1_12:9180728-9181528:-|nuORF;ENST00000422644.2_1_X:73693403-73693721:-|nuORF;ENST00000444886.1_1_9:128358162-128358726:+|nuORF;ENST00000457695.2_1_X:100110922-100111255:-|nuORF;ENST00000458678.1_1_1:241083162-241083366:+|nuORF;ENST00000510646.1_1_5:135764749-135765112:+|nuORF;ENST00000546565.1_1_12:93277549-93277891:+|nuORF;nc|ENSG00000135486|P09651-2|HNRNPA1;nc|ENSG00000135486|P09651-3|HNRNPA1	112.41091882917199	0.026537921851008135	2				NaN	NaN	0	NaN	620	2307	2928
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2964	13.226	NaN	3840.7	30	0	944.21	0.141	+			5002	ATSAPGNAR	9	30	422.7172697666135	843.4199866000271	2	422.71759033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSAPGNAR_	DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;nc|ENSG00000187908|Q9UGM3-2|DMBT1;nc|ENSG00000187908|Q9UGM3-2|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-4|DMBT1;nc|ENSG00000187908|Q9UGM3-4|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-8|DMBT1;nc|ENSG00000187908|Q9UGM3-8|DMBT1;nc|ENSG00000187908|Q9UGM3-9|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1	39.252832667884924	0.4290233611298554	2				NaN	NaN	0	NaN	649	2313	2963
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2999	13.302	NaN	7240.3	30	0	1371.2	0.143			+	21136	KKSSHSVKK	9	72	514.813976171011	1027.6133994088218	2	514.814697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KKSSHSVKK_	REV__ENSG00000116731|ENST00000311066|PRDM2;REV__nc|ENSG00000116731|Q13029-2|PRDM2;REV__nc|ENSG00000116731|Q13029-3|PRDM2;REV__nc|ENSG00000116731|Q13029-5|PRDM2;REV__PRDM2|p.P1648Qfs*14|1|0.24|ENSG00000116731|chr1:13782731-13782731|G/-|frameshift_variant	87.69643885390035	0.07135982304947239	2				NaN	NaN	0	NaN	678	2319	2998
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3067	13.455	NaN	1853.8	30	0	199.37	0.142	+			36680	SGNDKPLSK	9	47	473.2536901824112	944.4928274316225	2	473.25408935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SGNDKPLSK_	EIF2A|p.I537Sfs*4|1|0.78|ENSG00000144895|chr3:150581723-150581723|A/-|frameshift_variant;ENSG00000144895|ENST00000460851|EIF2A;nc|ENSG00000144895|Q9BY44-2|EIF2A;nc|ENSG00000144895|Q9BY44-3|EIF2A;nc|ENSG00000144895|Q9BY44-4|EIF2A	91.26522074875469	0.06129826844580791	2				NaN	NaN	0	NaN	734	2331	3066
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3141	13.623	NaN	3881.3	30	0	1371.6	0.214	+			31449	QKSKSKQH	8	46	485.7749433622116	NaN	0	485.7748107910156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QKSKSKQH_	ENSG00000083642|ENST00000315596|PDS5B;nc|ENSG00000083642|Q9NTI5-2|PDS5B;nc|ENSG00000083642|Q9NTI5-5|PDS5B;PDS5B|p.N1390Cfs*12|1|0.44|ENSG00000083642|chr13:32770750-32770751|AA/-|frameshift_variant	64.20726635412375	1.7418937515398478	2				NaN	NaN	0	NaN	793	2346	3140
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3142	13.626	NaN	1437.2	30	0	348.56	0.034			+	21402	KMNTVRAK	8	35	482.2745056152344	NaN	0	482.2745056152344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_KM(Oxidation (M))NTVRAK_	REV__ENSG00000176809|ENST00000584306|LRRC37A3;REV__ENST00000570311.1_1_17:45126763-45127807:+|nuORF;REV__LRRC37A3|p.F1359Cfs*8|1|0.04|ENSG00000176809|chr17:64860070-64860071|-/ACACAAACTAC|frameshift_variant;REV__LRRC37A3|p.K1304Nfs*11|2|0.36|ENSG00000176809|chr17:64860234-64860234|T/-|frameshift_variant	44.116797842482775	1.7418937515398478	2				NaN	NaN	0	NaN	794	2346	3140
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3160	13.663	NaN	8181	30	0	2148.5	0.214	+			3128	ASHIASNPK	9	52	462.7485236461064	923.4824943590128	2	462.74853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASHIASNPK_	EMC2|p.T249Rfs*6|1|0.17|ENSG00000104412|chr8:108479044-108479044|A/-|frameshift_variant;ENSG00000104412|ENST00000220853|EMC2;ENST00000520294.5_1_8:109476316-109498824:+|nuORF	90.60085204095205	0.06317133949006545	2				NaN	NaN	0	NaN	809	2349	3159
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3161	13.667	NaN	983.73	30	0	110.87	0.035			+	11328	FLCIQNIQ	8	36	489.75592041015625	NaN	0	489.75592041015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FLCIQNIQ_	REV__HERV35I-int_dup77|chr3:106541134-106546233:+|1.3860853119714591|0.1976016791882729|2.81|468.0|260|2|anti-sense	40.5726180659479	1.7418937515398478	2				NaN	NaN	0	NaN	810	2349	3159
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3179	13.704	NaN	2694.6	30	0	1176.3	0.141	+			38760	SSLSATGALA	10	37	439.2350347156327	876.4555164980654	2	439.2345886230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSLSATGALA_	ENSG00000178878|ENST00000356591|APOLD1;nc|ENSG00000178878|Q96LR9|APOLD1	115.45897859103373	0.03374325708541498	2				NaN	NaN	0	NaN	825	2352	3178
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3197	13.743	NaN	1526.9	30	0	295.77	0.141	+			48440	VTKPVGGDK	9	43	450.76144206564385	NaN	0	450.7615051269531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTKPVGGDK_	ENSG00000089009|ENST00000202773|RPL6;ENST00000445338.1_1_10:13633913-13634195:-|nuORF;ENST00000454924.1_1_7:63602236-63602701:-|nuORF;RPL6|p.K237Rfs*4|1|0.04|ENSG00000089009|chr12:112405856-112405857|TT/-|frameshift_variant	58.22992032128504	0.15686832049467786	2				NaN	NaN	0	NaN	840	2355	3196
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3232	13.819	NaN	1562.9	30	0	396.18	0.143	+			25182	LMAIPSHPGL	10	30	518.2881138282477	NaN	0	518.288330078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LMAIPSHPGL_	ENST00000229795.7_2_6:36078082-36078130:+|nuORF	23.04248740728303	0.42010282974921537	2				NaN	NaN	0	NaN	869	2361	3231
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3250	13.858	NaN	7692.1	30	0	1879	0.142	+			38455	SSAPSAIRK	9	63	458.7641427275253	915.5137325218507	2	458.7644348144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSAPSAIRK_	ENST00000155926.8_1_2:12857983-12858097:+|nuORF	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	884	2364	3249
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3268	13.896	NaN	4745.4	30	0	2575.1	0.142	+			17087	HSATTIGNK	9	59	464.7459251943824	NaN	0	464.7458190917969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HSATTIGNK_	ENSG00000172534|ENST00000310441|HCFC1;HCFC1|p.L913Wfs*11|1|0.39|ENSG00000172534|chrX:153956309-153956309|A/-|frameshift_variant;HCFC1|p.P1894Lfs*22|1|0.06|ENSG00000172534|chrX:153950835-153950835|G/-|frameshift_variant;HCFC1|p.P367Qfs*16|1|0.4|ENSG00000172534|chrX:153960146-153960146|G/-|frameshift_variant;HCFC1|p.P456Rfs*34|1|0.39|ENSG00000172534|chrX:153959879-153959879|G/-|frameshift_variant;nc|ENSG00000172534|P51610-2|HCFC1;nc|ENSG00000172534|P51610-3|HCFC1;nc|ENSG00000172534|P51610-4|HCFC1	63.53385203322761	0.134247007536971	2				NaN	NaN	0	NaN	899	2367	3267
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3285	13.933	NaN	4051.7	30	0	1376	0.214	+			22394	KTIKKTARREQ	11	52	453.611243978365	NaN	0	453.277099609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTIKKTARREQ_	ENSG00000135387|ENST00000341394|CAPRIN1;nc|ENSG00000135387|Q14444-2|CAPRIN1	32.03412808689991	0.42265347483761584	2				NaN	NaN	0	NaN	913	2370	3284
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3286	13.937	NaN	4594	30	0	828.64	0.106			+	5060	ATSHALAL	8	36	392.22338165267973	NaN	0	392.557861328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATSHALAL_	REV__POU3F3|p.G348Afs*21|1|0.17|ENSG00000198914|chr2:104856551-104856551|G/-|frameshift_variant	31.57888975003103	1.7418937515398478	2				NaN	NaN	0	NaN	914	2370	3284
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3287	13.939	NaN	2459.9	30	0	758.18	0.033			+	29899	PLPGRTRA	8	37	434.2618461756239	NaN	0	434.2618408203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PLPGRTRA_	REV__ENST00000443148.5_1_3:9874920-9876502:+|nuORF	42.47446043378293	1.7418937515398478	2				NaN	NaN	0	NaN	915	2370	3284
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3322	14.013	NaN	63600	30	0	13836	0.214	+			34238	RTGKVTVEK	9	95	509.30568213828957	1016.5968113433792	2	509.3058776855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTGKVTVEK_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	117.5257442709337	0.022697614825424036	2				NaN	NaN	0	NaN	944	2376	3321
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3323	14.017	NaN	1695.6	30	0	243.31	0.106	+			40974	SVGKDSHLK	9	48	485.7696086033885	NaN	0	485.7695617675781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVGKDSHLK_	ENSG00000198865|ENST00000361970|CCDC152;nc|ENSG00000198865|Q4G0S7-2|CCDC152	71.87747018426188	0.0992163553043454	2				NaN	NaN	0	NaN	945	2376	3321
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3324	14.019	NaN	1824.2	30	0	364.62	0.04			+	-1	HWALPCTPLPK	11	33	440.5681217548099	NaN	0	440.2340393066406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_HWALPC(Carbamidomethyl (C))TPLPK_	REV__ENST00000367240.6_1_1:203007988-203008045:+|nuORF	18.531049691330335	0.456735970842152	2				NaN	NaN	0	NaN	946	2376	3321
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3342	14.057	NaN	3383.5	30	0	792.82	0.214	+			4992	ATRTPGPAR	9	60	463.7621228410181	925.5096927488362	2	463.76214599609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATRTPGPAR_	RHBDF2|p.A471Pfs*208|1|0.15|ENSG00000129667|chr17:76474513-76474513|C/-|frameshift_variant	56.72105179125745	0.24094814563026265	2				NaN	NaN	0	NaN	961	2379	3341
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3343	14.06	NaN	7813	30	0	2733.2	0.106				-1	VVMRDPQTK	9	43	363.86201033845697	1088.564201615571	3	363.8623962402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_VVM(Oxidation (M))RDPQTK_	ENSG00000170144|ENST00000392524|HNRNPA3;ENST00000437410.2_1_1:54441353-54441674:-|nuORF;ENST00000472163.1_1_3:75263799-75264780:+|nuORF;HNRNPA3|p.K200Rfs*147|1|0.13|ENSG00000170144|chr2:177216544-177216544|A/-|frameshift_variant;HNRNPA3|p.Y267Lfs*2|1|0.62|ENSG00000170144|chr2:177216918-177216919|-/T|frameshift_variant;nc|ENSG00000170144|P51991-2|HNRNPA3	35.15202426646627	0.4747332964206883	2				NaN	NaN	0	NaN	962	2379	3341
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3344	14.062	NaN	690.12	30	0	250.41	0.106	+			864	AEHDAVRNA	9	32	491.7384033203125	NaN	0	491.7384033203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEHDAVRNA_	ENSG00000183734|ENST00000331289|ASCL2	30.317721548370564	0.32449924987115025	2				NaN	NaN	0	NaN	963	2379	3341
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3345	14.064	NaN	1203.1	30	0	279.11	0.106			+	25036	LLHLIRTA	8	37	468.8023681640625	NaN	0	468.8023681640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LLHLIRTA_	REV__ENSG00000181789|ENST00000314797|COPG1;REV__ENST00000513410.1_1_3:128982773-128985943:+|nuORF	13.775330524044264	1.7418937515398478	2				NaN	NaN	0	NaN	964	2379	3341
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3346	14.066	NaN	849.6	30	0	664.97	0.038				-1	TFILNMESMV	10	13	400.85882568359375	NaN	0	400.85882568359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_TFILNM(Oxidation (M))ESMV_	ENSG00000083307|ENST00000646743|GRHL2;nc|ENSG00000083307|Q6ISB3-2|GRHL2	7.018692734479806	0.4201028297492154	2				NaN	NaN	0	NaN	965	2379	3341
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3364	14.103	NaN	9965.8	30	0	7902.4	0.147				-1	LPSSINGMCWK	11	41	417.8662588701335	1250.5769472106006	3	417.86651611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LPSSINGM(Oxidation (M))CWK_	ENST00000566376.3_1_18:52999491-53018213:-|nuORF	27.64392233501311	0.6998289966465058	2				NaN	NaN	0	NaN	980	2382	3363
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3382	14.142	NaN	649.94	30	0	176.21	0.214	+			16030	HATTHNAY	8	34	457.70977783203125	NaN	0	457.70977783203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HATTHNAY_	ENSG00000143799|ENST00000366794|PARP1;ENST00000490921.5_1_1:226549163-226553858:-|nuORF	33.51558372728122	1.7418937515398478	2				NaN	NaN	0	NaN	995	2385	3381
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3383	14.145	NaN	5213.6	30	0	1198.7	0.033	+			12192	GAPHTIAAR	9	51	447.2513110362754	892.4880691393508	2	447.2514953613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GAPHTIAAR_	ENST00000305877.12_2_22:23522425-23523292:+|nuORF	37.15910966729921	0.4535818937225704	2				NaN	NaN	0	NaN	996	2385	3381
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3401	14.182	NaN	6173.4	30	0	1175.4	0.215	+			32817	RAVSPSNPK	9	63	478.26917378437327	954.5237946355466	2	478.26995849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RAVSPSNPK_	ENSG00000135525|ENST00000354570|MAP7;nc|ENSG00000135525|Q14244-2|MAP7;nc|ENSG00000135525|Q14244-3|MAP7;nc|ENSG00000135525|Q14244-4|MAP7;nc|ENSG00000135525|Q14244-5|MAP7;nc|ENSG00000135525|Q14244-6|MAP7;nc|ENSG00000135525|Q14244-7|MAP7	61.691277971877994	0.19951612995419254	2				NaN	NaN	0	NaN	1011	2388	3400
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3402	14.185	NaN	7425.1	30	0	972.96	0.042			+	19668	KDMDRFHGWKQ	11	73	483.23557796452775	1446.6849044937833	3	483.2359313964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KDMDRFHGWKQ_	REV__ENST00000429242.7_3_19:19567968-19576198:+|nuORF	29.550750289552195	0.6798279264880025	2				NaN	NaN	0	NaN	1012	2388	3400
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3488	14.376	NaN	13473	30	0	1583.1	0.214	+			40250	STSHVSVSK	9	77	466.2455055629024	930.4764581926048	2	466.24542236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STSHVSVSK_	ENSG00000215182|ENST00000621226|MUC5AC;ENSG00000215182|ENST00000621226|MUC5AC;MUC5AC|p.R4729Efs*5|1|0.24|ENSG00000215182|chr11:1192325-1192325|C/-|frameshift_variant;MUC5AC|p.R4729Efs*5|1|0.24|ENSG00000215182|chr11:1192325-1192325|C/-|frameshift_variant	123.20810148215591	0.019257656778428764	2				NaN	NaN	0	NaN	1083	2403	3487
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3489	14.38	NaN	7856.3	30	0	1358.1	0.033	+			17	AAAELQDR	8	52	437.22463550986436	872.4347180865287	2	437.22454833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAAELQDR_	ENSG00000048342|ENST00000424120|CC2D2A;nc|ENSG00000048342|Q9P2K1-2|CC2D2A	79.45101966838831	0.3281480470254892	2				NaN	NaN	0	NaN	1084	2403	3487
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3524	14.455	NaN	1764.8	30	0	353.95	0.143			+	30946	QEMEVVKR	8	41	509.77052984206733	1017.5265067509347	2	509.7713928222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QEMEVVKR_	REV__ENSG00000183091|ENST00000397345|NEB;REV__nc|ENSG00000183091|P20929-1|NEB;REV__nc|ENSG00000183091|P20929-3|NEB;REV__nc|ENSG00000183091|P20929-4|NEB	36.446750945000026	0.6783611724927969	2				NaN	NaN	0	NaN	1113	2409	3523
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3542	14.493	NaN	6418	30	0	3196.4	0.144	+			40160	STQQPLTKK	9	39	344.20070797016604	1029.5802945106982	3	344.2011413574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STQQPLTKK_	ENSG00000182511|ENST00000328850|FES;ENST00000464684.5_1_15:91434747-91438785:+|nuORF;ENST00000496379.5_1_15:91433070-91435551:+|nuORF;nc|ENSG00000182511|P07332-2|FES;nc|ENSG00000182511|P07332-3|FES;nc|ENSG00000182511|P07332-4|FES	54.776311868738084	0.25715957988447635	2				NaN	NaN	0	NaN	1128	2412	3541
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3560	14.532	NaN	6674.6	30	0	575.42	0.214				-1	 	0	64	474.26643755186615	946.5183221705323	2	474.2667541503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1143	2415	3559
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3561	14.536	NaN	232.82	30	0	36.827	0.106			+	21171	KKVTNAAKK	9	17	494.3188171386719	NaN	0	494.3188171386719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KKVTNAAKK_	REV__tr|U7T209|U7T209_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00800PE=4SV=1	18.262085536374414	0.37517301184500873	2				NaN	NaN	0	NaN	1144	2415	3559
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3562	14.538	NaN	2029.7	30	0	629.35	0.106			+	48831	VVASQDRLM	9	30	340.1826878203091	1017.5262340611274	3	340.183349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVASQDRLM_	REV__ENSG00000174428|ENST00000472837|GTF2IRD2B;REV__ENSG00000196275|ENST00000451013|GTF2IRD2;REV__ENSG00000263001|ENST00000573035|GTF2I;REV__ENST00000457594.2_7:74237150-74267816:-|nuORF;REV__GTF2I|p.L189*|1|0.21|ENSG00000263001|chr7:74700609-74700609|T/-|frameshift_variant;REV__GTF2IRD2|p.F606Sfs*8|1|0.44|ENSG00000196275|chr7:74797697-74797697|G/-|frameshift_variant;REV__nc|ENSG00000174428|Q6EKJ0-2|GTF2IRD2B;REV__nc|ENSG00000196275|Q86UP8-2|GTF2IRD2;REV__nc|ENSG00000196275|Q86UP8-3|GTF2IRD2;REV__nc|ENSG00000196275|Q86UP8-5|GTF2IRD2;REV__nc|ENSG00000263001|P78347-2|GTF2I;REV__nc|ENSG00000263001|P78347-3|GTF2I;REV__nc|ENSG00000263001|P78347-4|GTF2I;REV__nc|ENSG00000263001|P78347-5|GTF2I	32.81241826257853	0.4965981579233955	2				NaN	NaN	0	NaN	1145	2415	3559
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3563	14.54	NaN	574.37	30	0	129.81	0.033			+	41886	SVTPTGSKG	9	20	417.22174072265625	NaN	0	417.22174072265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVTPTGSKG_	REV__ENSG00000205592|ENST00000454784|MUC19;REV__nc|ENSG00000205592|Q7Z5P9-2|MUC19	26.69291269510374	0.34280015626154364	2				NaN	NaN	0	NaN	1146	2415	3559
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3581	14.577	NaN	1757.8	30	0	299.77	0.145				-1	VVVVMIGNLK	10	38	363.2242402201365	NaN	0	363.22430419921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_VVVVM(Oxidation (M))IGNLK_	ENSG00000188050|ENST00000340112|RNF133;RNF133|p.F278Sfs*43|1|0.17|ENSG00000188050|chr7:122698086-122698086|A/-|frameshift_variant	42.86426827375447	0.3507156137006061	2				NaN	NaN	0	NaN	1161	2418	3580
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3601	14.615	NaN	2650.9	30	0	598.63	0.141			+	30763	QDPSYSAA	8	43	419.68287269053803	837.3511924478761	2	419.683349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QDPSYSAA_	REV__ENSG00000075461|ENST00000262138|CACNG4	45.9519527083369	0.6193794311207887	2				NaN	NaN	0	NaN	1178	2421	3600
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3653	14.731	NaN	759.6	30	0	125.44	0.214	+			44061	TPSKSVRKA	9	31	487.29315185546875	NaN	0	487.29315185546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TPSKSVRKA_	ENSG00000171490|ENST00000571133|RSL1D1;ENST00000396503.7_1_16:11931646-11945380:-|nuORF;nc|ENSG00000171490|O76021-2|RSL1D1	14.864876125193954	0.3866709117995958	2				NaN	NaN	0	NaN	1221	2430	3652
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3654	14.735	NaN	3133.8	30	0	1505.9	0.106				-1	AVKCMRSIR	9	34	379.5404052734375	NaN	0	379.5404052734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_AVKC(Carbamidomethyl (C))M(Oxidation (M))RSIR_	ACACA|p.E2200Gfs*26|1|0.48|ENSG00000278540|chr17:37097953-37097954|-/T|frameshift_variant;ACACB|p.L1398Sfs*26|1|0.18|ENSG00000076555|chr12:109233795-109233795|C/-|frameshift_variant;ACACB|p.T1476Hfs*7|1|0.28|ENSG00000076555|chr12:109235620-109235621|-/T|frameshift_variant;ENSG00000076555|ENST00000338432|ACACB;ENSG00000278540|ENST00000616317|ACACA;nc|ENSG00000076555|O00763-2|ACACB;nc|ENSG00000076555|O00763-3|ACACB;nc|ENSG00000278540|Q13085-2|ACACA;nc|ENSG00000278540|Q13085-3|ACACA;nc|ENSG00000278540|Q13085|ACACA	32.81241826257853	0.3119040447479903	2				NaN	NaN	0	NaN	1222	2430	3652
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3655	14.737	NaN	894.05	30	0	214.94	0.032	+			4509	ATKERPHHHAG	11	28	414.2164898953233	NaN	0	414.2168884277344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATKERPHHHAG_	ENSG00000183091|ENST00000397345|NEB;nc|ENSG00000183091|P20929-1|NEB;nc|ENSG00000183091|P20929-3|NEB;nc|ENSG00000183091|P20929-4|NEB	40.05817265558897	0.3867246477658885	2				NaN	NaN	0	NaN	1223	2430	3652
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3673	14.774	NaN	6653.2	30	0	5705.6	0.214	+			33700	RPEAPSLR	8	43	463.26434640992994	924.5141398866599	2	463.264404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RPEAPSLR_	ENST00000543264.6_1_19:4282969-4288256:+|nuORF;ENST00000599689.1_1_19:4282969-4290466:+|nuORF	30.503639358989545	0.7238069182250283	2				NaN	NaN	0	NaN	1238	2433	3672
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3674	14.778	NaN	2081.8	30	0	181.14	0.106	+			15994	HANDDKSSL	9	57	493.73072465548586	NaN	0	493.7307434082031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HANDDKSSL_	ENSG00000179889|ENST00000396410|PDXDC1;nc|ENSG00000179889|Q6P996-3|PDXDC1;nc|ENSG00000179889|Q6P996-4|PDXDC1;nc|ENSG00000179889|Q6P996-5|PDXDC1;PDXDC1|p.P706Tfs*3|1|0.06|ENSG00000179889|chr16:15036023-15036024|-/A|frameshift_variant	78.26377905018397	0.07733306720594871	2				NaN	NaN	0	NaN	1239	2433	3672
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3675	14.78	NaN	945.49	30	0	175.47	0.033			+	15746	GVSLAVHR	8	36	419.74865633073557	NaN	0	419.74859619140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GVSLAVHR_	REV__ENSG00000170584|ENST00000302764|NUDCD2	26.79610172149135	1.7418937515398478	2				NaN	NaN	0	NaN	1240	2433	3672
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3693	14.817	NaN	1265.3	30	0	121.13	0.214			+	-1	MAPLGSKMR	9	47	503.7624206542969	NaN	0	503.7624206542969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))APLGSKMR_	REV__ENST00000555122.1_1_14:105421289-105421433:-|nuORF	53.351449002276354	0.18359631779194618	2				NaN	NaN	0	NaN	1255	2436	3692
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3694	14.82	NaN	634.02	30	0	89.325	0.106			+	43355	TGDKSKKKK	9	30	510.3153076171875	NaN	0	510.3153076171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TGDKSKKKK_	REV__ENSG00000234545|ENST00000445716|FAM133B;REV__ENST00000481407.5_1_7:92191598-92207100:-|nuORF;REV__ENST00000490747.1_1_7:92199124-92206443:-|nuORF;REV__nc|ENSG00000234545|Q5BKY9-2|FAM133B	19.1035232394073	0.3723251548669699	2				NaN	NaN	0	NaN	1256	2436	3692
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3695	14.822	NaN	3179.2	30	0	339.72	0.106				-1	VCLACFSVWQW	11	54	485.89056396484375	NaN	0	485.89056396484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_VC(Carbamidomethyl (C))LAC(Carbamidomethyl (C))FSVWQW_	ENST00000466102.1_1_7:98248987-98249296:+|nuORF	29.550750289552195	0.43372083775723597	2				NaN	NaN	0	NaN	1257	2436	3692
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3696	14.824	NaN	1271.6	30	0	624	0.037	+			35217	SAKWPLASQL	10	20	367.5411071777344	NaN	0	367.5411071777344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SAKWPLASQL_	ENST00000358598.6_1_17:66526593-66526758:+|nuORF	24.231819034082204	0.4201028297492154	2				NaN	NaN	0	NaN	1258	2436	3692
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3715	14.861	NaN	13265	30	0	2204.9	0.214	+			45381	TVTKPVGGDK	10	67	501.28479936270907	1000.5550457922182	2	501.2846984863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVTKPVGGDK_	ENSG00000089009|ENST00000202773|RPL6;ENST00000445338.1_1_10:13633913-13634195:-|nuORF;ENST00000454924.1_1_7:63602236-63602701:-|nuORF;RPL6|p.K237Rfs*4|1|0.04|ENSG00000089009|chr12:112405856-112405857|TT/-|frameshift_variant	106.88024417677582	0.05726438866303799	2				NaN	NaN	0	NaN	1274	2439	3714
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3716	14.864	NaN	890.65	30	0	268.16	0.033	+			45802	VAHVSREA	8	25	434.7353820800781	NaN	0	434.7353820800781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VAHVSREA_	ENSG00000115649|ENST00000360507|CNPPD1	29.14955571784316	1.7418937515398478	2				NaN	NaN	0	NaN	1275	2439	3714
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3734	14.901	NaN	1344.8	30	0	191.9	0.146				-1	LPPSTGPCCIK	11	36	391.5333251953125	NaN	0	391.5333251953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_LPPSTGPCC(Carbamidomethyl (C))IK_	RYR3|p.T3162I|1|0.55|ENSG00000198838|chr15:33785878-33785878|C/T|missense_variant	36.31764250033197	0.4035636655321173	2				NaN	NaN	0	NaN	1290	2442	3733
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3752	14.94	NaN	3835.9	30	0	1958.1	0.144			+	-1	PCSILRMLA	9	35	340.5171813964844	NaN	0	340.5171813964844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_PCSILRM(Oxidation (M))LA_	REV__GPC2|p.G259S|1|0.36|ENSG00000213420|chr7:100173952-100173952|C/T|missense_variant	35.61828744233558	0.29773779453147337	2				NaN	NaN	0	NaN	1305	2445	3751
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3770	14.977	NaN	7894.2	30	0	2625.4	0.214	+			4400	ATHVGSVEK	9	62	464.24848082316913	926.4824087131383	2	464.24847412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATHVGSVEK_	ENSG00000080986|ENST00000261597|NDC80	98.62937762414208	0.04060045538121712	2				NaN	NaN	0	NaN	1320	2448	3769
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3771	14.981	NaN	653.81	30	0	158.69	0.106			+	-1	MGLCVLAA	8	23	397.2015686035156	NaN	0	397.2015686035156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_M(Oxidation (M))GLCVLAA_	REV__CDH11|p.R526Nfs*48|1|0.07|ENSG00000140937|chr16:64971644-64971645|-/GT|frameshift_variant;REV__CDH11|p.R526Sfs*48|1|0.09|ENSG00000140937|chr16:64971643-64971644|-/GG|frameshift_variant;REV__ENSG00000140937|ENST00000268603|CDH11;REV__nc|ENSG00000140937|P55287-2|CDH11	24.504012794735996	1.7418937515398478	2				NaN	NaN	0	NaN	1321	2448	3769
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3772	14.983	NaN	2761.9	30	0	251.94	0.038				-1	PSGGLCCPKPK	11	56	400.8673095703125	NaN	0	400.8673095703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_PSGGLC(Carbamidomethyl (C))C(Carbamidomethyl (C))PKPK_	ENST00000561824.5_1_16:30212049-30214087:+|nuORF	45.02220120713402	0.3510711409553835	2				NaN	NaN	0	NaN	1322	2448	3769
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3790	15.021	NaN	608.24	30	0	120.22	0.214	+			34235	RTGKPIAVK	9	30	485.3140176457829	NaN	0	485.3139953613281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTGKPIAVK_	CSDE1|p.D560Gfs*6|1|0.3|ENSG00000009307|chr1:114725295-114725296|-/C|frameshift_variant;CSDE1|p.V523Wfs*4|1|0.28|ENSG00000009307|chr1:114726284-114726284|C/-|frameshift_variant;ENSG00000009307|ENST00000358528|CSDE1;nc|ENSG00000009307|O75534-2|CSDE1;nc|ENSG00000009307|O75534-3|CSDE1;nc|ENSG00000009307|O75534-4|CSDE1	32.75053402867276	0.3122164853807509	2				NaN	NaN	0	NaN	1337	2451	3789
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3791	15.024	NaN	340.63	30	0	54.7	0.106	+			42222	TAAKKHGTK	9	30	471.280029296875	NaN	0	471.280029296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAAKKHGTK_	ENSG00000101421|ENST00000217402|CHMP4B	26.69291269510374	0.34280015626154364	2				NaN	NaN	0	NaN	1338	2451	3789
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3792	15.026	NaN	571.19	30	0	195.38	0.033			+	30302	PTLLCELP	8	19	443.24285888671875	NaN	0	443.24285888671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PTLLCELP_	REV__ENSG00000254206|ENST00000698511|NPIPB11	19.359975847455235	1.7418937515398478	2				NaN	NaN	0	NaN	1339	2451	3789
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3810	15.063	NaN	2325.6	30	0	322.39	0.214			+	16092	HDEQLELPSC	10	57	585.7618271677933	NaN	0	585.7617797851562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HDEQLELPSC_	REV__PEF1|p.P42Lfs*95|1|0.12|ENSG00000162517|chr1:31635422-31635422|G/-|frameshift_variant	64.20726635412375	0.1999210135493042	2				NaN	NaN	0	NaN	1354	2454	3809
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3811	15.066	NaN	483.36	30	0	35.763	0.106	+			26877	LWLLSPSRK	9	31	367.22454833984375	NaN	0	367.22454833984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LWLLSPSRK_	TET3|p.G1748Afs*106|2|0.28|ENSG00000187605|chr2:74102025-74102025|G/-|frameshift_variant	29.170058357718403	0.3302935627494407	2				NaN	NaN	0	NaN	1355	2454	3809
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3812	15.069	NaN	653.93	30	0	64.443	0.106	+			12895	GESAVGRPP	9	36	435.2278747558594	NaN	0	435.2278747558594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GESAVGRPP_	ENST00000464112.5_1_6:35436382-35436547:+|nuORF	20.94693142431847	0.3660861156085067	2				NaN	NaN	0	NaN	1356	2454	3809
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3813	15.07	NaN	1718.6	30	0	379.47	0.106			+	43316	TGAKQRSP	8	44	422.735831712803	NaN	0	423.2219543457031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TGAKQRSP_	REV__ENSG00000067798|ENST00000397909|NAV3;REV__NAV3|p.K1098Nfs*81|1|0.22|ENSG00000067798|chr12:78119487-78119487|A/-|frameshift_variant;REV__NAV3|p.K1745Sfs*14|1|0.13|ENSG00000067798|chr12:78177244-78177244|C/-|frameshift_variant;REV__NAV3|p.L1995Sfs*5|1|0.05|ENSG00000067798|chr12:78188704-78188705|-/T|frameshift_variant;REV__NAV3|p.T2082Qfs*22|1|0.13|ENSG00000067798|chr12:78190166-78190166|A/-|frameshift_variant;REV__nc|ENSG00000067798|Q8IVL0-2|NAV3;REV__nc|ENSG00000067798|Q8IVL0-3|NAV3	27.882242232435846	1.7418937515398478	2				NaN	NaN	0	NaN	1357	2454	3809
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3814	15.072	NaN	930.49	30	0	305.65	0.106			+	33265	RGGGGGVF	8	14	353.6845703125	NaN	0	353.6845703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RGGGGGVF_	REV__ENST00000441006.5_1_22:17517965-17528257:+|nuORF	5.08689130490037	1.7418937515398478	2				NaN	NaN	0	NaN	1358	2454	3809
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3815	15.074	NaN	533.69	30	0	234.17	0.034				-1	TQVWLCGV	8	20	481.73968505859375	NaN	0	481.73968505859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_TQVWLC(Carbamidomethyl (C))GV_	ENST00000350669.5_1_12:21791383-21794945:-|nuORF	11.511019455917149	1.7418937515398478	2				NaN	NaN	0	NaN	1359	2454	3809
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3833	15.112	NaN	8249.6	30	0	1672	0.214	+			5754	AVGKSSIAK	9	60	430.7640247710133	NaN	0	430.7640075683594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVGKSSIAK_	ENSG00000140057|ENST00000267584|AK7	120.8684288430529	0.001996491448359331	2				NaN	NaN	0	NaN	1374	2457	3832
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3834	15.115	NaN	6268.4	30	0	1490.7	0.106	+			20265	KENGGARL	8	53	422.735831712803	NaN	0	422.7357177734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KENGGARL_	ENSG00000118137|ENST00000236850|APOA1	94.00642277110589	1.7418937515398478	2				NaN	NaN	0	NaN	1375	2457	3832
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3835	15.117	NaN	657.86	30	0	162.39	0.106			+	37523	SLLPFLRLPEW	11	26	457.6004333496094	NaN	0	457.6004333496094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLLPFLRLPEW_	REV__ENST00000511277.5_1_17:47283751-47283994:-|nuORF	14.086013023434994	0.456735970842152	2				NaN	NaN	0	NaN	1376	2457	3832
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3836	15.119	NaN	3767.8	30	0	1292.3	0.106	+			22524	KTQKIVIKK	9	50	362.58486378689474	1084.7327619608843	3	362.5369567871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTQKIVIKK_	ENSG00000147654|ENST00000337573|EBAG9;nc|ENSG00000147654|O00559-2|EBAG9	76.16968421966216	0.11411088698345859	2				NaN	NaN	0	NaN	1377	2457	3832
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3837	15.121	NaN	628.55	30	0	69.209	0.106	+			9941	ERAAFLDSL	9	37	511.2678527832031	NaN	0	511.2678527832031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ERAAFLDSL_	ENSG00000140853|ENST00000688547|NLRC5;ENST00000539881.5_1_16:57068826-57081664:+|nuORF;nc|ENSG00000140853|Q86WI3-2|NLRC5;nc|ENSG00000140853|Q86WI3-4|NLRC5;nc|ENSG00000140853|Q86WI3-5|NLRC5;nc|ENSG00000140853|Q86WI3-6|NLRC5;NLRC5|p.H1717Ifs*29|2|0.41|ENSG00000140853|chr16:57079112-57079112|C/-|frameshift_variant	37.15910966729921	0.2899585034171616	2				NaN	NaN	0	NaN	1378	2457	3832
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3838	15.123	NaN	168.14	30	0	35.885	0.036	+			47621	VSAGEAVVNRV	11	14	550.8078002929688	NaN	0	550.8078002929688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VSAGEAVVNRV_	ENSG00000240065|ENST00000374859|PSMB9;ENST00000467593.1_1_6:32823908-32826344:+|nuORF;nc|ENSG00000240065|P28065-2|PSMB9	13.45404412870281	0.456735970842152	2				NaN	NaN	0	NaN	1379	2457	3832
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3856	15.16	NaN	6265.4	30	0	1711.4	0.214			+	21099	KKQKSIIIK	9	61	362.58486378689474	1084.7327619608843	3	362.5851135253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KKQKSIIIK_	REV__tr|U7STS9|U7STS9_FUSNURNApolymerasesigmafactor54DNA-bindingdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01555PE=4SV=1	60.11826168202944	0.21262886028301267	2				NaN	NaN	0	NaN	1394	2460	3855
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3857	15.164	NaN	2364.1	30	0	925.54	0.037	+			33429	RIIKNEVKK	9	48	376.5806260102331	NaN	0	376.5808410644531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RIIKNEVKK_	ENSG00000188846|ENST00000396203|RPL14	51.52775601994872	0.19616436856719055	2				NaN	NaN	0	NaN	1395	2460	3855
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3875	15.2	NaN	2387.3	30	0	391.23	0.141			+	49059	VVKAESQAA	9	35	451.75048958428465	901.4864262353693	2	451.7501525878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVKAESQAA_	REV__ENSG00000132305|ENST00000410111|IMMT;REV__ENST00000474969.5_1_2:86385703-86422514:-|nuORF;REV__ENST00000490238.5_1_2:86385703-86389088:-|nuORF;REV__nc|ENSG00000132305|Q16891-2|IMMT;REV__nc|ENSG00000132305|Q16891-3|IMMT;REV__nc|ENSG00000132305|Q16891-4|IMMT	35.61828744233558	0.47037581924408073	2				NaN	NaN	0	NaN	1410	2463	3874
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3894	15.24	NaN	596.14	30	0	93.321	0.143			+	15881	GYSAASTLLAP	11	34	525.7765502929688	NaN	0	525.7765502929688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GYSAASTLLAP_	REV__ENST00000505099.5_1_6:11723662-11735825:-|nuORF	25.125986553469783	0.45344013546260314	2				NaN	NaN	0	NaN	1426	2466	3893
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3912	15.279	NaN	42114	30	0	10590	0.214			+	8720	EEEGPSTR	8	86	452.70366975593305	903.3927865786661	2	452.7041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EEEGPSTR_	REV__ENSG00000070182|ENST00000644917|SPTB	58.78195531508484	0.5138399468736706	2				NaN	NaN	0	NaN	1441	2469	3911
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3913	15.283	NaN	7027.4	30	0	2567.1	0.106	+			13971	GSASPAVTK	9	48	409.224152964294	816.433752995388	2	409.22406005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSASPAVTK_	ENSG00000197969|ENST00000360280|VPS13A;nc|ENSG00000197969|Q96RL7-2|VPS13A;nc|ENSG00000197969|Q96RL7-3|VPS13A;nc|ENSG00000197969|Q96RL7-4|VPS13A;VPS13A|p.I1709Nfs*6|1|0.34|ENSG00000197969|chr9:77318397-77318398|-/A|frameshift_variant;VPS13A|p.M1697Cfs*13|1|0.07|ENSG00000197969|chr9:77318363-77318363|A/-|frameshift_variant;VPS13A|p.N2071Tfs*18|2|0.32|ENSG00000197969|chr9:77337367-77337367|A/-|frameshift_variant;VPS13A|p.Y2315Ifs*2|1|0.09|ENSG00000197969|chr9:77340463-77340463|T/-|frameshift_variant	136.26810882979174	0.012230845423532208	2				NaN	NaN	0	NaN	1442	2469	3911
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3914	15.285	NaN	1167.6	30	0	574.24	0.106				-1	AVQATCSLAR	10	16	359.5220031738281	NaN	0	359.5220031738281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_AVQATC(Carbamidomethyl (C))SLAR_	MTX1|p.R8Afs*110|1|0.32|ENSG00000173171|chr1:155208820-155208820|C/-|frameshift_variant;MTX1|p.S12Rfs*106|1|0.36|ENSG00000173171|chr1:155208838-155208838|T/-|frameshift_variant	21.68575002086885	0.4201028297492154	2				NaN	NaN	0	NaN	1443	2469	3911
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3915	15.287	NaN	309.02	30	0	68.747	0.034			+	43715	TKQTRITQ	8	21	488.2821350097656	NaN	0	488.2821350097656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TKQTRITQ_	REV__ENSG00000185104|ENST00000396153|FAF1;REV__nc|ENSG00000185104|Q9UNN5-2|FAF1	39.252832667884924	1.7418937515398478	2				NaN	NaN	0	NaN	1444	2469	3911
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3933	15.324	NaN	1219.9	30	0	281.26	0.214	+			1407	AEVTSHAA	8	26	393.19307089166074	NaN	0	393.19317626953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEVTSHAA_	ENSG00000050405|ENST00000341247|LIMA1;LIMA1|p.T536Lfs*38|2|0.4|ENSG00000050405|chr12:50177739-50177739|G/-|frameshift_variant;nc|ENSG00000050405|Q9UHB6-4|LIMA1	42.47446043378293	1.7418937515398478	2				NaN	NaN	0	NaN	1459	2472	3932
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3934	15.328	NaN	4809.2	30	0	1648.3	0.106			+	3995	ATAWAGVLAKG	11	36	348.86488898205397	NaN	0	349.19903564453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATAWAGVLAKG_	REV__PPP1R10|p.H751Kfs*162|1|0.37|ENSG00000204569|chr6:30602386-30602398|CGTGAGGACGATG/-|frameshift_variant	32.81241826257853	0.4191849651971536	2				NaN	NaN	0	NaN	1460	2472	3932
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3935	15.33	NaN	2403.2	30	0	425.06	0.106				-1	 	0	39	679.9775713394051	2036.9108846184154	3	679.9799194335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1461	2472	3932
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3936	15.332	NaN	3004.6	30	0	355.63	0.034			+	36912	SIIHCRSC	8	39	459.7172402541222	917.4199275750444	2	459.7176513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SIIHCRSC_	REV__DDX56|p.R295C|1|0.14|ENSG00000136271|chr7:44571499-44571499|G/A|missense_variant	38.80614096846853	0.6637206697844082	2				NaN	NaN	0	NaN	1462	2472	3932
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3954	15.368	NaN	4158.7	30	0	1287.9	0.14			+	47993	VSPVFTPG	8	34	402.21701420441957	802.4194754756392	2	402.21630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSPVFTPG_	REV__BAHCC1|p.G559Afs*75|1|0.28|ENSG00000266074|chr17:81443020-81443020|G/-|frameshift_variant;REV__BAHCC1|p.G851Rfs*223|1|0.43|ENSG00000266074|chr17:81444699-81444700|-/C|frameshift_variant;REV__BAHCC1|p.H888Pfs*186|1|0.24|ENSG00000266074|chr17:81444811-81444812|-/C|frameshift_variant;REV__BAHCC1|p.H888Tfs*86|1|0.31|ENSG00000266074|chr17:81444812-81444812|C/-|frameshift_variant;REV__BAHCC1|p.P2034Lfs*15|1|0.65|ENSG00000266074|chr17:81460375-81460375|C/-|frameshift_variant;REV__BAHCC1|p.R1605Afs*107|1|0.22|ENSG00000266074|chr17:81456436-81456436|C/-|frameshift_variant;REV__BAHCC1|p.S1322Afs*42|1|0.44|ENSG00000266074|chr17:81447737-81447737|C/-|frameshift_variant;REV__BAHCC1|p.S1322Qfs*8|1|0.45|ENSG00000266074|chr17:81447736-81447737|-/C|frameshift_variant;REV__ENSG00000266074|ENST00000675386|BAHCC1;REV__nc|ENSG00000266074|Q9P281|BAHCC1	42.47446043378293	0.6409579893742323	2				NaN	NaN	0	NaN	1477	2475	3953
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3972	15.407	NaN	7301.4	30	0	1290.3	0.214			+	27325	MHRFFPHRQVD	11	62	490.57955835317034	1468.716845659711	3	490.5799255371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MHRFFPHRQVD_	REV__ENSG00000175634|ENST00000312629|RPS6KB2;REV__ENST00000531765.2_1_11:67201468-67201970:+|nuORF	28.5767321226876	0.690044582712672	2				NaN	NaN	0	NaN	1492	2478	3971
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3973	15.41	NaN	544.02	30	0	91.257	0.106				-1	RAYRLPCP	8	29	516.7757568359375	NaN	0	516.7757568359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_RAYRLPC(Carbamidomethyl (C))P_	ENST00000398882.7_2_8:144649355-144650324:-|nuORF;ENST00000533210.5_1_8:144649355-144650416:-|nuORF	19.359975847455235	1.7418937515398478	2				NaN	NaN	0	NaN	1493	2478	3971
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3974	15.412	NaN	340.32	30	0	108.69	0.033			+	21059	KKLEASSK	8	22	445.7684020996094	NaN	0	445.7684020996094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KKLEASSK_	REV__ENSG00000137764|ENST00000178640|MAP2K5;REV__ENST00000560591.5_1_15:67835673-67951132:+|nuORF;REV__nc|ENSG00000137764|Q13163-2|MAP2K5;REV__nc|ENSG00000137764|Q13163-3|MAP2K5;REV__nc|ENSG00000137764|Q13163-4|MAP2K5	21.9598887501803	1.7418937515398478	2				NaN	NaN	0	NaN	1494	2478	3971
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3992	15.449	NaN	11291	30	0	1900.7	0.215				-1	HHLCRARRYCH	11	69	503.57833021153175	1507.7131612347953	3	503.57855224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_HHLCRARRYC(Carbamidomethyl (C))H_	ENSG00000132382|ENST00000254718|MYBBP1A;ENST00000574547.5_1_17:4442712-4447986:-|nuORF;nc|ENSG00000132382|Q9BQG0-2|MYBBP1A	13.507942900623993	0.8072396761313949	2				NaN	NaN	0	NaN	1509	2481	3991
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3993	15.452	NaN	1653.4	30	0	1143	0.034	+			17149	HTAAQLGEK	9	27	477.75372314453125	NaN	0	477.75372314453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HTAAQLGEK_	ENSG00000064651|ENST00000262461|SLC12A2;nc|ENSG00000064651|P55011-3|SLC12A2;SLC12A2|p.E1119Rfs*7|1|0.47|ENSG00000064651|chr5:128184417-128184418|-/A|frameshift_variant;SLC12A2|p.F466Lfs*59|1|0.11|ENSG00000064651|chr5:128135793-128135793|T/-|frameshift_variant;SLC12A2|p.P1171Sfs*18|1|0.38|ENSG00000064651|chr5:128186498-128186499|-/TC|frameshift_variant	45.02220120713402	0.24099765136254067	2				NaN	NaN	0	NaN	1510	2481	3991
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4011	15.488	NaN	3932.9	30	0	1522	0.214	+			17118	HSLSPGPSK	9	63	455.2431733949487	908.4717938566974	2	455.2432861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HSLSPGPSK_	ENSG00000137193|ENST00000373509|PIM1;ENST00000479509.1_1_6:37140348-37141864:+|nuORF;nc|ENSG00000137193|P11309-2|PIM1	54.722347961057174	0.257609425301511	2				NaN	NaN	0	NaN	1525	2484	4010
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4012	15.492	NaN	2778.8	30	0	575.66	0.034	+			35690	SDILVFDY	8	50	486.2399531386598	970.4653533441196	2	486.2403564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SDILVFDY_	ENST00000502424.1_1_5:14797477-14798464:-|nuORF	62.97842346883844	0.4722955155785405	2				NaN	NaN	0	NaN	1526	2484	4010
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4031	15.53	NaN	15467	30	0	3657.2	0.214	+			46449	VESKKKAVQRL	11	67	429.26998835232786	1284.7881356571836	3	429.27032470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VESKKKAVQRL_	ENSG00000198900|ENST00000361337|TOP1	52.167168403610894	0.39337392184041037	2				NaN	NaN	0	NaN	1542	2487	4030
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4032	15.533	NaN	1384.6	30	0	427.17	0.106			+	16579	HFYWWEFIRQW	11	31	566.6076049804688	NaN	0	566.6076049804688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HFYWWEFIRQW_	REV__ENST00000470683.1_1_1:113153424-113161548:-|nuORF;REV__ENST00000477332.5_1_1:113149890-113161548:-|nuORF;REV__ENST00000480988.5_1_1:113119662-113161548:-|nuORF;REV__ENST00000497457.5_1_1:113121036-113161548:-|nuORF	1.4187509189679102	0.456735970842152	2				NaN	NaN	0	NaN	1543	2487	4030
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4033	15.535	NaN	3303	30	0	392.54	0.046				-1	 	0	66	587.9543067581476	NaN	0	587.9545288085938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1544	2487	4030
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4048	15.567	NaN	2289.3	30	0	681.65	0.214	+			38473	SSASSTSLK	9	42	434.224855338239	NaN	0	434.22479248046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSASSTSLK_	ENSG00000196781|ENST00000376499|TLE1	78.26377905018397	0.07733306720594871	2				NaN	NaN	0	NaN	1556	2490	4047
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4049	15.571	NaN	10805	30	0	2089.2	0.106	+			34440	RTVSDSIKK	9	84	345.20450698438106	1032.5916915533433	3	345.20477294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RTVSDSIKK_	ENSG00000137076|ENST00000314888|TLN1;nc|ENSG00000137076|Q9Y490-2|TLN1	128.60217544463768	0.015992218256422188	2				NaN	NaN	0	NaN	1557	2490	4047
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4050	15.573	NaN	2464.9	30	0	1062.9	0.106	+			22909	KVMTKVIKK	9	39	358.9071083318934	1073.6994955958803	3	358.907470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KVMTKVIKK_	ENSG00000168016|ENST00000645898|TRANK1;nc|ENSG00000168016|O15050|TRANK1;TRANK1|p.F2073Lfs*13|1|0.1|ENSG00000168016|chr3:36833232-36833232|A/-|frameshift_variant;TRANK1|p.P972Qfs*12|1|0.34|ENSG00000168016|chr3:36856675-36856675|G/-|frameshift_variant;TRANK1|p.V1077Wfs*30|1|0.29|ENSG00000168016|chr3:36856362-36856362|T/-|frameshift_variant	31.529811441608018	0.5085848003137583	2				NaN	NaN	0	NaN	1558	2490	4047
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4051	15.575	NaN	1001.3	30	0	197.49	0.033	+			2900	ASATSVATK	9	34	418.22955322265625	NaN	0	418.22955322265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASATSVATK_	ENSG00000065154|ENST00000368845|OAT;ENST00000476917.5_1_10:126095965-126100767:-|nuORF;OAT|p.T33Qfs*28|1|0.19|ENSG00000065154|chr10:124412075-124412075|T/-|frameshift_variant	35.15202426646627	0.3000918603816441	2				NaN	NaN	0	NaN	1559	2490	4047
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4069	15.611	NaN	18003	30	0	4111.5	0.214	+			2857	ASAPANVSK	9	67	422.72950475405696	843.4444565749139	2	422.7300109863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASAPANVSK_	ENSG00000135597|ENST00000450536|REPS1;nc|ENSG00000135597|Q96D71-2|REPS1;nc|ENSG00000135597|Q96D71-3|REPS1;nc|ENSG00000135597|Q96D71-4|REPS1	133.9934435666947	0.013297982075521412	2				NaN	NaN	0	NaN	1574	2493	4068
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4070	15.615	NaN	2859.4	30	0	661.94	0.106	+			40661	SVASASTTR	9	37	440.2304536017481	NaN	0	440.23052978515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVASASTTR_	ELF4|p.A554Pfs*13|1|0.32|ENSG00000102034|chrX:130067053-130067053|C/-|frameshift_variant;ELF4|p.Q341Rfs*30|2|0.25|ENSG00000102034|chrX:130069466-130069466|G/-|frameshift_variant;ENSG00000102034|ENST00000308167|ELF4	85.16082228582465	0.053699699744190164	2				NaN	NaN	0	NaN	1575	2493	4068
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4071	15.617	NaN	741.14	30	0	58.77	0.106			+	51488	YVKLMIKL	8	41	504.3216857910156	NaN	0	504.3216857910156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YVKLMIKL_	REV__ENSG00000104880|ENST00000668164|ARHGEF18;REV__nc|ENSG00000104880|Q6ZSZ5-1|ARHGEF18;REV__nc|ENSG00000104880|Q6ZSZ5-2|ARHGEF18;REV__nc|ENSG00000104880|Q6ZSZ5-5|ARHGEF18;REV__nc|ENSG00000104880|Q6ZSZ5-6|ARHGEF18	20.481830146152948	1.741893751539848	2				NaN	NaN	0	NaN	1576	2493	4068
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4072	15.619	NaN	1044.9	30	0	293.98	0.038				-1	KCSAPNRATSV	11	35	397.5377197265625	NaN	0	397.5377197265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_KC(Carbamidomethyl (C))SAPNRATSV_	ENST00000211413.9_1_6:32116492-32119704:-|nuORF;ENST00000375150.6_1_6:32116492-32119883:-|nuORF;ENST00000467780.5_1_6:32116492-32117557:-|nuORF;ENST00000472641.1_1_6:32116492-32119637:-|nuORF;ENST00000495191.5_1_6:32116492-32118763:-|nuORF	37.59989570853033	0.39784920612721525	2				NaN	NaN	0	NaN	1577	2493	4068
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4090	15.657	NaN	907.05	30	0	286.16	0.14			+	48187	VTAGGGGLGL	10	30	401.2267633918586	NaN	0	401.2267761230469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTAGGGGLGL_	REV__ENST00000546378.1_1_12:54369508-54369550:+|nuORF	53.351449002276354	0.2844141321977336	2				NaN	NaN	0	NaN	1592	2496	4089
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4108	15.695	NaN	3958.6	30	0	879.46	0.214	+			2868	ASAPSAACK	9	43	403.19690092282787	804.3792489124558	2	403.19720458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASAPSAACK_	ENSG00000137273|ENST00000645481|FOXF2	62.107414245175825	0.1960472003779324	2				NaN	NaN	0	NaN	1607	2499	4107
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4109	15.698	NaN	629.3	30	0	84.174	0.035			+	20954	KKDNVKKE	8	32	494.79229736328125	NaN	0	494.79229736328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KKDNVKKE_	REV__tr|U7SQQ6|U7SQQ6_FUSNUNodBhomologydomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01754PE=4SV=1	27.047317107675042	1.7418937515398478	2				NaN	NaN	0	NaN	1608	2499	4107
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4127	15.735	NaN	9177.8	30	0	1852.6	0.214	+			40979	SVGKNLASK	9	64	452.26628765829344	902.5180223833869	2	452.2663269042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVGKNLASK_	ENSG00000137642|ENST00000260197|SORL1;ENST00000532451.1_1_11:121323091-121416136:+|nuORF;SORL1|p.F2103Lfs*44|1|0.22|ENSG00000137642|chr11:121625218-121625218|T/-|frameshift_variant;SORL1|p.M1581Cfs*34|2|0.28|ENSG00000137642|chr11:121605196-121605196|A/-|frameshift_variant	117.5257442709337	0.022697614825424036	2				NaN	NaN	0	NaN	1623	2502	4126
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4128	15.739	NaN	3991.1	30	0	1723.7	0.106	+			35412	SAQTERVPL	9	31	334.1852561005395	999.5339389018186	3	334.1856384277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAQTERVPL_	ENSG00000159461|ENST00000290649|AMFR	38.80614096846853	0.43426287593479557	2				NaN	NaN	0	NaN	1624	2502	4126
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4129	15.741	NaN	315.33	30	0	78.703	0.106				-1	MNLMKQAV	8	15	483.74029541015625	NaN	0	483.74029541015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Oxidation (M)	_M(Oxidation (M))NLM(Oxidation (M))KQAV_	ENSG00000105186|ENST00000306065|ANKRD27;ENST00000593232.5_1_19:33134141-33134495:-|nuORF	14.664097394203935	1.7418937515398478	2				NaN	NaN	0	NaN	1625	2502	4126
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4130	15.743	NaN	479.57	30	0	59.6	0.034			+	21120	KKSDIIRD	8	37	487.78509521484375	NaN	0	487.78509521484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KKSDIIRD_	REV__ENSG00000154734|ENST00000284984|ADAMTS1	24.20275056022122	1.7418937515398478	2				NaN	NaN	0	NaN	1626	2502	4126
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4146	15.774	NaN	6216.5	30	0	3139.4	0.142	+			17135	HSSGPMVEK	9	64	486.23413939857454	970.4537258639491	2	486.2351379394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HSSGPMVEK_	ENSG00000069509|ENST00000378045|FUNDC1;ENST00000483115.1_1_X:44383446-44401387:-|nuORF;FUNDC1|p.F37C|1|0.33|ENSG00000069509|chrX:44542020-44542020|A/C|missense_variant	129.42129120953632	0.01549634589885217	2				NaN	NaN	0	NaN	1639	2505	4145
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4181	15.852	NaN	7380.4	30	0	3338.1	0.214				-1	 	0	37	411.2214484693327	820.4283440054654	2	411.2217102050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1668	2511	4180
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4182	15.855	NaN	8201.2	30	0	2256.4	0.106	+			33944	RSAPSGPVR	9	77	463.7617548198091	925.5089567064182	2	463.7618713378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RSAPSGPVR_	ENSG00000147274|ENST00000320676|RBMX;nc|ENSG00000147274|P38159-2|RBMX	126.24258497203832	0.01742065577488747	2				NaN	NaN	0	NaN	1669	2511	4180
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4183	15.858	NaN	745.82	30	0	100.38	0.106			+	-1	PPHLISALK	9	33	509.3060607910156	NaN	0	509.3060607910156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))PPHLISALK_	REV__ENST00000395761.3_1_4:74735636-74735675:+|nuORF	27.882242232435846	0.3367954786602879	2				NaN	NaN	0	NaN	1670	2511	4180
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4184	15.859	NaN	1028.3	30	0	380.9	0.036	+			22271	KTATNIIKK	9	34	339.55377197265625	NaN	0	339.55377197265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTATNIIKK_	ENSG00000112414|ENST00000367609|ADGRG6;ENST00000472054.2_1_6:142738255-142764649:+|nuORF;ENST00000497898.2_1_6:142759254-142764649:+|nuORF;nc|ENSG00000112414|Q86SQ4-2|ADGRG6;nc|ENSG00000112414|Q86SQ4-4|ADGRG6;nc|ENSG00000112414|Q86SQ4|ADGRG6	36.446750945000026	0.29355505452396785	2				NaN	NaN	0	NaN	1671	2511	4180
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4202	15.896	NaN	4670.9	30	0	512.14	0.142	+			31233	QGYPIWGK	8	58	474.75027653923127	947.4860001452626	2	474.750244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QGYPIWGK_	nc|ENSG00000166473|Q7Z442-2|PKD1L2;nc|ENSG00000166473|Q7Z442|PKD1L2	101.21157088398209	0.2500103534009131	2				NaN	NaN	0	NaN	1686	2514	4201
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4220	15.936	NaN	973.21	30	0	201.85	0.144	+			33467	RISESGIKK	9	32	339.87322998046875	NaN	0	339.87322998046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RISESGIKK_	ENSG00000131558|ENST00000253861|EXOC4;ENST00000484397.5_1_7:133682345-133692589:+|nuORF	29.170058357718403	0.3302935627494407	2				NaN	NaN	0	NaN	1701	2517	4219
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4238	15.976	NaN	81812	30	0	15732	0.214	+			6329	AVTKYTSAK	9	88	484.7736300874293	967.5327072416586	2	484.77392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVTKYTSAK_	ENSG00000124635|ENST00000339812|H2BC11;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000234289|ENST00000599962|H2BC12L	209.21039097705471	5.5375157516244266E-08	2				NaN	NaN	0	NaN	1716	2520	4237
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4239	15.98	NaN	1912.8	30	0	352.2	0.106			+	33484	RKAQQVGQ	8	46	457.7616882324219	NaN	0	457.7616882324219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RKAQQVGQ_	REV__ENSG00000115677|ENST00000310931|HDLBP;REV__ENST00000487169.5_1_2:242174673-242189369:-|nuORF;REV__HDLBP|p.S551Kfs*2|1|0.11|ENSG00000115677|chr2:241248082-241248083|-/T|frameshift_variant;REV__nc|ENSG00000115677|Q00341-2|HDLBP	33.51558372728122	1.7418937515398478	2				NaN	NaN	0	NaN	1717	2520	4237
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4240	15.982	NaN	2370	30	0	341.7	0.034			+	8680	EEAARKTAA	9	51	473.75082529134244	945.4870976494849	2	473.75103759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EEAARKTAA_	REV__ENSG00000100023|ENST00000398831|PPIL2	31.529811441608018	0.5085848003137583	2				NaN	NaN	0	NaN	1718	2520	4237
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4257	16.018	NaN	4666.6	30	0	1064.1	0.214	+			15719	GVRDITSGR	9	60	480.76428620999377	959.5140194867876	2	480.7644958496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVRDITSGR_	ENST00000506237.5_1_5:32531910-32591672:+|nuORF	32.81241826257853	0.4965981579233955	2				NaN	NaN	0	NaN	1732	2523	4256
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4258	16.021	NaN	1879.7	30	0	532.44	0.106			+	42536	TARLDEWG	8	48	474.2323303222656	NaN	0	474.2323303222656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TARLDEWG_	REV__ENSG00000173898|ENST00000533211|SPTBN2;REV__nc|ENSG00000173898|O15020-2|SPTBN2	53.351449002276354	1.7418937515398478	2				NaN	NaN	0	NaN	1733	2523	4256
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4259	16.024	NaN	3785.7	30	0	987.8	0.033	+			44935	TVAPTTANK	9	48	451.7504012153806	901.4862494975612	2	451.75048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVAPTTANK_	ENSG00000116260|ENST00000367602|QSOX1;nc|ENSG00000116260|O00391-2|QSOX1;QSOX1|p.S469Vfs*117|1|0.35|ENSG00000116260|chr1:180194325-180194325|G/-|frameshift_variant	51.19269402634007	0.2889735674168909	2				NaN	NaN	0	NaN	1734	2523	4256
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4277	16.059	NaN	7718.5	30	0	1422.5	0.214				-1	 	0	62	486.79500394511706	971.5754549570341	2	486.79522705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1749	2526	4276
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4278	16.063	NaN	43129	30	0	11339	0.106	+			27852	MTGSSAPCK	9	73	441.1959623748243	880.3773718164487	2	441.1961669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MTGSSAPCK_	ENST00000392001.6_1_2:238499129-238499162:-|nuORF	145.15565482312357	0.00806134135205793	2				NaN	NaN	0	NaN	1750	2526	4276
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4279	16.065	NaN	7853.8	30	0	2285.3	0.106	+			39611	STHQAAIVSK	10	69	521.2876818962953	1040.5608108593906	2	521.28857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STHQAAIVSK_	ENSG00000122786|ENST00000361675|CALD1;ENST00000482470.5_1_7:134552484-134644871:+|nuORF;nc|ENSG00000122786|Q05682-2|CALD1;nc|ENSG00000122786|Q05682-3|CALD1;nc|ENSG00000122786|Q05682-4|CALD1;nc|ENSG00000122786|Q05682-5|CALD1;nc|ENSG00000122786|Q05682-6|CALD1	139.38205640894643	0.010918844784185366	2				NaN	NaN	0	NaN	1751	2526	4276
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4280	16.067	NaN	1644.1	30	0	702.79	0.106	+			50909	YGGRGVGG	8	30	361.6823963870638	NaN	0	361.6825256347656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YGGRGVGG_	ANTXR2|p.R391I|1|0.14|ENSG00000163297|chr4:79983885-79983885|C/A|missense_variant;ENSG00000163297|ENST00000403729|ANTXR2;ENSG00000169604|ENST00000303714|ANTXR1;nc|ENSG00000163297|P58335-2|ANTXR2;nc|ENSG00000163297|P58335|ANTXR2;nc|ENSG00000169604|Q9H6X2-5|ANTXR1	21.70233525837049	1.7418937515398478	2				NaN	NaN	0	NaN	1752	2526	4276
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4281	16.068	NaN	4392.7	30	0	1503.8	0.036				-1	LSLPLACLLA	10	35	357.548468268471	1069.623575405613	3	357.54925537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_LSLPLAC(Carbamidomethyl (C))LLA_	CON__ENSEMBL:ENSBTAP00000013050	23.52269567125451	0.6877354443478558	2				NaN	NaN	0	NaN	1753	2526	4276
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4299	16.106	NaN	2892.5	30	0	608.35	0.141				-1	ASAMQHVL	8	35	436.7179586460178	NaN	0	436.71807861328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ASAM(Oxidation (M))QHVL_	ENSG00000083457|ENST00000263087|ITGAE;ITGAE|p.A480Lfs*87|1|0.48|ENSG00000083457|chr17:3753872-3753872|C/-|frameshift_variant;ITGAE|p.I909Lfs*19|1|0.09|ENSG00000083457|chr17:3732398-3732398|C/-|frameshift_variant;ITGAE|p.L601Pfs*8|1|0.31|ENSG00000083457|chr17:3751741-3751742|-/G|frameshift_variant	50.0245360154114	1.7418937515398478	2				NaN	NaN	0	NaN	1768	2529	4298
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4317	16.145	NaN	2208.4	30	0	304.11	0.214			+	20301	KEPVGFSAIG	10	65	502.772339247407	NaN	0	502.7720947265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEPVGFSAIG_	REV__ENSG00000002745|ENST00000222462|WNT16;REV__nc|ENSG00000002745|Q9UBV4-2|WNT16	85.86182877749512	0.07061569993707435	2				NaN	NaN	0	NaN	1783	2532	4316
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4318	16.149	NaN	5342.6	30	0	3427.2	0.106	+			17154	HTASVIGNK	9	58	463.75659456261155	925.4986361920231	2	463.7562255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HTASVIGNK_	ENSG00000111727|ENST00000229330|HCFC2;HCFC2|p.A339Hfs*2|1|0.43|ENSG00000111727|chr12:104082847-104082847|A/-|frameshift_variant;HCFC2|p.N309Ifs*32|4|0.23|ENSG00000111727|chr12:104082757-104082757|A/-|frameshift_variant;HCFC2|p.S246N|1|0.23|ENSG00000111727|chr12:104080800-104080800|G/A|missense_variant;nc|ENSG00000111727|Q9Y5Z7-2|HCFC2	75.04331003522576	0.118981335847003	2				NaN	NaN	0	NaN	1784	2532	4316
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4319	16.151	NaN	758	30	0	191.97	0.106				-1	KKEMVLQR	8	40	524.302978515625	NaN	0	524.302978515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_KKEM(Oxidation (M))VLQR_	DNHD1|p.S3597Rfs*6|1|0.1|ENSG00000179532|chr11:6565718-6565719|-/AG|frameshift_variant;DNHD1|p.T4259Pfs*33|2|0.33|ENSG00000179532|chr11:6568772-6568772|C/-|frameshift_variant;ENSG00000179532|ENST00000254579|DNHD1	44.116797842482775	1.7418937515398478	2				NaN	NaN	0	NaN	1785	2532	4316
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4320	16.153	NaN	1339.3	30	0	225.3	0.034			+	34250	RTGPWVWG	8	51	479.7476613989687	957.4807698647375	2	479.7478942871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RTGPWVWG_	REV__ENST00000586443.1_1_17:42429890-42430163:+|nuORF	63.30626980617807	0.4690498839812213	2				NaN	NaN	0	NaN	1786	2532	4316
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4338	16.19	NaN	14348	30	0	4266.8	0.214	+			15297	GTVDKKMVEK	10	78	378.8777391455435	1133.6113880368305	3	378.8779602050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTVDKKMVEK_	CBL|p.L272*|1|0.25|ENSG00000110395|chr11:119274894-119274894|T/-|frameshift_variant;CBL|p.V581Cfs*4|1|0.08|ENSG00000110395|chr11:119285359-119285360|-/C|frameshift_variant;ENSG00000110395|ENST00000264033|CBL	93.1432384553994	0.11307820852620741	2				NaN	NaN	0	NaN	1801	2535	4337
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4339	16.194	NaN	4011.5	30	0	981.09	0.106	+			52	AAAPVCSSK	9	32	417.21290203212993	832.4112511310599	2	417.2132568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAAPVCSSK_	CREBRF|p.M279Wfs*22|1|0.35|ENSG00000164463|chr5:173091005-173091005|A/-|frameshift_variant;ENSG00000164463|ENST00000296953|CREBRF;ENST00000520464.1_1_5:172507634-172535847:+|nuORF;nc|ENSG00000164463|Q8IUR6-2|CREBRF;nc|ENSG00000164463|Q8IUR6-3|CREBRF	44.377184641726394	0.36891676396732553	2				NaN	NaN	0	NaN	1802	2535	4337
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4340	16.196	NaN	6718.4	30	0	1023.3	0.106	+			26154	LSQKQALE	8	62	458.75871287869677	915.5028728241936	2	458.758544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSQKQALE_	ENSG00000151422|ENST00000281092|FER;FER|p.I432Lfs*16|1|0.32|ENSG00000151422|chr5:108946186-108946186|A/-|frameshift_variant;FER|p.K476Nfs*53|4|0.22|ENSG00000151422|chr5:108954821-108954821|A/-|frameshift_variant;nc|ENSG00000151422|P16591-2|FER	116.90359126533652	0.23898233959989007	2				NaN	NaN	0	NaN	1803	2535	4337
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4341	16.198	NaN	5463.9	30	0	866.31	0.033			+	22555	KTSGRVLQ	8	56	444.76689450157033	887.5192360699407	2	444.7668762207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTSGRVLQ_	REV__nc|ENSG00000121417|Q13398-3|ZNF211	84.9155231211612	0.2928622555056503	2				NaN	NaN	0	NaN	1804	2535	4337
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4376	16.274	NaN	4623.2	30	0	1192.4	0.142	+			41707	SVSDPGQAR	9	46	458.7275785854707	915.4406042377415	2	458.7278137207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSDPGQAR_	nc|ENSG00000157800|Q8NCC5-3|SLC37A3	79.71258880314673	0.09879134589249085	2				NaN	NaN	0	NaN	1833	2541	4375
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4394	16.313	NaN	141560	30	0	55035	0.209	+			41862	SVTGSAVSK	9	79	418.22928518485213	834.4440174365043	2	418.2295227050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVTGSAVSK_	ENSG00000073921|ENST00000393346|PICALM;nc|ENSG00000073921|Q13492-2|PICALM;nc|ENSG00000073921|Q13492-3|PICALM;nc|ENSG00000073921|Q13492-5|PICALM;PICALM|p.L275Gfs*3|1|0.14|ENSG00000073921|chr11:86003436-86003437|-/TTCC|frameshift_variant	168.25843898104137	0.0030641937004078144	2				NaN	NaN	0	NaN	1848	2544	4393
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4395	16.316	NaN	749.73	30	0	72.059	0.106			+	21531	KNSKVSSGK	9	39	467.76922607421875	NaN	0	467.76922607421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KNSKVSSGK_	REV__ENSG00000178053|ENST00000466246|MLF1;REV__MLF1|p.K268Nfs*3|1|0.3|ENSG00000178053|chr3:158605194-158605194|A/-|frameshift_variant;REV__nc|ENSG00000178053|P58340-2|MLF1;REV__nc|ENSG00000178053|P58340-3|MLF1;REV__nc|ENSG00000178053|P58340-4|MLF1;REV__nc|ENSG00000178053|P58340-5|MLF1;REV__nc|ENSG00000178053|P58340|MLF1	67.49366992349736	0.1173583512313808	2				NaN	NaN	0	NaN	1849	2544	4393
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4396	16.318	NaN	3728.8	30	0	476.65	0.106			+	35364	SAPQTVSK	8	52	409.2239831327354	816.4334133322708	2	409.2244567871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAPQTVSK_	REV__ENST00000326775.9_1_7:99102345-99103658:+|nuORF	71.87747018426188	0.391254423828572	2				NaN	NaN	0	NaN	1850	2544	4393
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4397	16.32	NaN	620.56	30	0	83.36	0.106			+	18158	ILPQRCCL	8	33	473.2532043457031	NaN	0	473.2532043457031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ILPQRCCL_	REV__ENSG00000131697|ENST00000378156|NPHP4;REV__ENST00000378161.5_1_1:5924088-5924661:-|nuORF;REV__ENST00000460696.1_1_1:5923922-5924763:-|nuORF;REV__ENST00000489180.6_1_1:5923327-5936049:-|nuORF	23.036711822280957	1.7418937515398478	2				NaN	NaN	0	NaN	1851	2544	4393
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4398	16.322	NaN	15293	30	0	1993.2	0.106				-1	 	0	76	508.2669963758572	1014.5194398185145	2	508.2676086425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1852	2544	4393
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4399	16.324	NaN	1096.5	30	0	274.25	0.033			+	44083	TPTKPSKS	8	32	423.2399645179996	844.4653761027993	2	423.23980712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TPTKPSKS_	REV__ENSG00000198000|ENST00000442668|NOL8;REV__nc|ENSG00000198000|Q76FK4-2|NOL8;REV__nc|ENSG00000198000|Q76FK4-4|NOL8;REV__NOL8|p.D1050*|1|0.39|ENSG00000198000|chr9:92301578-92301579|-/A|frameshift_variant	31.529811441608018	0.715883593221515	2				NaN	NaN	0	NaN	1853	2544	4393
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4417	16.359	NaN	2093	30	0	593.97	0.214	+			36322	SESPGKTV	8	43	402.7085769221681	NaN	0	402.70831298828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SESPGKTV_	nc|ENSG00000211640|P01721|IGLV6-57	99.37495909608758	1.7418937515398478	2				NaN	NaN	0	NaN	1868	2547	4416
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4418	16.363	NaN	50172	30	0	19975	0.106	+			22812	KVFMENLMKK	10	75	433.8980710538401	1298.6723837617203	3	433.8980407714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Oxidation (M)	_KVFM(Oxidation (M))ENLM(Oxidation (M))KK_	CBL|p.R116K|1|0.59|ENSG00000110395|chr11:119232599-119232599|G/A|missense_variant	46.45678178249821	0.4896490706773647	2				NaN	NaN	0	NaN	1869	2547	4416
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4419	16.365	NaN	283.14	30	0	91.763	0.035				-1	RVCTPTTGR	9	19	524.2720336914062	NaN	0	524.2720336914062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_RVC(Carbamidomethyl (C))TPTTGR_	ENSG00000134077|ENST00000452837|THUMPD3	29.170058357718403	0.3302935627494407	2				NaN	NaN	0	NaN	1870	2547	4416
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4437	16.401	NaN	5847.9	30	0	2072.1	0.214	+			3424	ASQKVTISK	9	61	481.2872050987287	960.5598572642574	2	481.287353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASQKVTISK_	CACUL1|p.Y368Tfs*100|1|0.52|ENSG00000151893|chr10:118686137-118686137|C/-|frameshift_variant;ENST00000369151.7_1_10:120445350-120445566:-|nuORF	120.27252224102466	0.02103478360410217	2				NaN	NaN	0	NaN	1885	2550	4436
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4438	16.405	NaN	3942.8	30	0	707.47	0.106	+			3108	ASGPRPTYK	9	53	488.7638078487341	975.5130627642682	2	488.7639465332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASGPRPTYK_	ENSG00000117335|ENST00000367042|CD46;nc|ENSG00000117335|P15529-10|CD46;nc|ENSG00000117335|P15529-16|CD46;nc|ENSG00000117335|P15529-2|CD46;nc|ENSG00000117335|P15529-3|CD46;nc|ENSG00000117335|P15529-8|CD46;nc|ENSG00000117335|P15529|CD46	61.691277971877994	0.19951612995419254	2				NaN	NaN	0	NaN	1886	2550	4436
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4439	16.407	NaN	1244.4	30	0	589.85	0.106			+	51438	YVDIRGSK	8	40	469.25830078125	NaN	0	469.25830078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YVDIRGSK_	REV__ENSG00000162517|ENST00000373703|PEF1;REV__ENST00000461006.5_1_1:32096163-32098865:-|nuORF	30.503639358989545	1.7418937515398478	2				NaN	NaN	0	NaN	1887	2550	4436
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4440	16.409	NaN	1408.2	30	0	241.73	0.106	+			32816	RAVRQPGE	8	45	456.75359192168753	911.4926309101751	2	456.7540283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RAVRQPGE_	ENST00000416823.1_1_22:29702661-29703048:+|nuORF	65.80317337860623	0.44433089765398776	2				NaN	NaN	0	NaN	1888	2550	4436
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4441	16.411	NaN	907.53	30	0	144.28	0.106				-1	MPQGGGQHY	9	36	495.70813500833094	989.4017170834619	2	495.7080383300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_M(Oxidation (M))PQGGGQHY_	ENSG00000141380|ENST00000415083|SS18;nc|ENSG00000141380|Q15532-2|SS18	30.503639358989545	0.5181749237905803	2				NaN	NaN	0	NaN	1889	2550	4436
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4442	16.412	NaN	29572	30	0	2931.2	0.037	+			34418	RTTHNIIEK	9	89	371.2117028554925	1110.6132791666776	3	371.2120666503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RTTHNIIEK_	ENSG00000198911|ENST00000361204|SREBF2;nc|ENSG00000198911|Q12772-2|SREBF2	86.88156770896713	0.07365720931774442	2				NaN	NaN	0	NaN	1890	2550	4436
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4460	16.448	NaN	3553.3	30	0	1140.8	0.215	+			22348	KTGPVLAK	8	40	407.26332227708303	NaN	0	407.2634582519531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTGPVLAK_	ENSG00000147439|ENST00000276416|BIN3;nc|ENSG00000147439|Q9NQY0-2|BIN3	64.20726635412375	1.7418937515398478	2				NaN	NaN	0	NaN	1905	2553	4459
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4461	16.452	NaN	2735.7	30	0	426.02	0.106	+			39027	SSSKLSMSK	9	60	477.7496817123564	953.4848104915128	2	477.7492370605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSSKLSMSK_	ENSG00000100227|ENST00000252115|POLDIP3;nc|ENSG00000100227|Q9BY77-2|POLDIP3	101.25262130126117	0.03792372629710479	2				NaN	NaN	0	NaN	1906	2553	4459
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4462	16.454	NaN	1309.5	30	0	439.02	0.033	+			15776	GVTPPAGTAA	10	31	421.2241965819044	NaN	0	421.2238464355469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GVTPPAGTAA_	EHMT2|p.L855Cfs*36|2|0.23|ENSG00000204371|chr6:31884685-31884685|G/-|frameshift_variant;ENSG00000204371|ENST00000375537|EHMT2;ENST00000480912.5_1_6:31847863-31860642:-|nuORF;nc|ENSG00000204371|Q96KQ7-2|EHMT2	34.172542307311794	0.38797011891751465	2				NaN	NaN	0	NaN	1907	2553	4459
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4480	16.491	NaN	2714.5	30	0	448.48	0.214	+			23122	KVVVSPTK	8	55	429.27655166103403	856.5385503888681	2	429.2767028808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVVVSPTK_	ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232323706-232327997:-|nuORF	79.71258880314673	0.32596852995588826	2				NaN	NaN	0	NaN	1922	2556	4479
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4481	16.494	NaN	3553.4	30	0	424.92	0.036	+			34031	RSLDTHVTK	9	63	528.7930341035897	1055.5715152739792	2	528.7945556640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RSLDTHVTK_	ENSG00000100304|ENST00000216129|TTLL12	79.48907831485694	0.09975780661107167	2				NaN	NaN	0	NaN	1923	2556	4479
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4499	16.531	NaN	101190	30	0	21582	0.214	+			37022	SIQRKLQEK	9	106	377.2274881530485	1128.6606350593456	3	377.22760009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIQRKLQEK_	ENSG00000138640|ENST00000264344|FAM13A;ENST00000508360.5_1_4:89653076-89671014:-|nuORF;ENST00000511573.5_1_4:89649686-89680064:-|nuORF;nc|ENSG00000138640|O94988-1|FAM13A;nc|ENSG00000138640|O94988-3|FAM13A;nc|ENSG00000138640|O94988-5|FAM13A;nc|ENSG00000138640|O94988-6|FAM13A	155.5846463517096	0.005567437401040498	2				NaN	NaN	0	NaN	1938	2559	4498
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4500	16.535	NaN	13333	30	0	6895	0.106	+			16780	HPAENGKSNF	10	67	550.7604757803267	NaN	0	550.7599487304688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HPAENGKSNF_	B2M|p.V69Sfs*21|1|0.67|ENSG00000166710|chr15:44715554-44715555|-/A|frameshift_variant;B2M|p.V69Wfs*34|1|0.32|ENSG00000166710|chr15:44715555-44715555|A/-|frameshift_variant;B2M|p.Y98Lfs*5|1|0.08|ENSG00000166710|chr15:44715648-44715648|A/-|frameshift_variant;ENSG00000166710|ENST00000648006|B2M;ENST00000559720.5_1_15:45003705-45007919:+|nuORF	88.17693792209575	0.06076230397739847	2				NaN	NaN	0	NaN	1939	2559	4498
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4501	16.537	NaN	438.58	30	0	112.46	0.035	+			23045	KVTDTASMK	9	28	490.7574768066406	NaN	0	490.7574768066406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KVTDTASMK_	ENSG00000121316|ENST00000240617|PLBD1	40.05817265558897	0.275207446262312	2				NaN	NaN	0	NaN	1940	2559	4498
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4519	16.572	NaN	10923	30	0	3901.5	0.214	+			16952	HPPGDTMSLF	10	62	551.2552222870181	1100.4958916408361	2	551.25634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HPPGDTMSLF_	ENST00000462794.1_1_22:36912452-36912849:-|nuORF	45.9519527083369	0.4943008177357963	2				NaN	NaN	0	NaN	1955	2562	4518
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4520	16.576	NaN	3740.9	30	0	1813.3	0.106	+			32484	QVNGGTVAEK	10	54	501.7642209994286	1001.5138890656572	2	501.7642822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QVNGGTVAEK_	ENSG00000100316|ENST00000216146|RPL3;ENST00000413027.1_1_6:31248141-31248948:+|nuORF	76.16968421966216	0.22691431239609447	2				NaN	NaN	0	NaN	1956	2562	4518
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4521	16.578	NaN	2056.2	30	0	507.12	0.106			+	32194	QSVELPRK	8	46	478.77967611901295	955.5447993048259	2	478.7801208496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QSVELPRK_	REV__ENSG00000060656|ENST00000373779|PTPRU;REV__nc|ENSG00000060656|Q92729-3|PTPRU;REV__nc|ENSG00000060656|Q92729-4|PTPRU;REV__nc|ENSG00000060656|Q92729|PTPRU;REV__PTPRU|p.G852Afs*35|1|0.26|ENSG00000060656|chr1:29303898-29303898|G/-|frameshift_variant;REV__PTPRU|p.S732N|1|0.42|ENSG00000060656|chr1:29284746-29284746|G/A|missense_variant	84.9155231211612	0.2928622555056503	2				NaN	NaN	0	NaN	1957	2562	4518
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4522	16.58	NaN	2063.2	30	0	405.72	0.034	+			23042	KVTDPSVAK	9	30	472.7737733761723	943.5329938191446	2	472.77471923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KVTDPSVAK_	ENSG00000198408|ENST00000361464|OGA;nc|ENSG00000198408|O60502-2|OGA;nc|ENSG00000198408|O60502-4|OGA	67.49366992349736	0.1516260258713357	2				NaN	NaN	0	NaN	1958	2562	4518
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4540	16.618	NaN	20727	30	0	2271.4	0.214	+			34231	RTGDGIVQK	9	76	487.27451158396553	972.5344702347311	2	487.2747497558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTGDGIVQK_	ENSG00000152818|ENST00000367545|UTRN;nc|ENSG00000152818|P46939-2|UTRN;UTRN|p.G3160*|1|0.03|ENSG00000152818|chr6:144821001-144821002|AG/-|frameshift_variant;UTRN|p.R3003Pfs*5|1|0.27|ENSG00000152818|chr6:144793915-144793916|-/C|frameshift_variant;UTRN|p.T2422Hfs*35|1|0.47|ENSG00000152818|chr6:144557282-144557282|A/-|frameshift_variant	145.15565482312357	0.00806134135205793	2				NaN	NaN	0	NaN	1973	2565	4539
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4541	16.622	NaN	1868.3	30	0	377.74	0.034	+			1453	AFAYRQGL	8	41	463.2462158203125	NaN	0	463.2462158203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AFAYRQGL_	ENSG00000221829|ENST00000378643|FANCG	46.76643321282427	1.7418937515398478	2				NaN	NaN	0	NaN	1974	2565	4539
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4559	16.659	NaN	2823.3	30	0	513.71	0.214	+			19787	KEAPAPPKA	9	54	454.76357932853745	907.5126057238749	2	454.7633972167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEAPAPPKA_	ENSG00000198242|ENST00000422514|RPL23A;ENST00000399247.6_1_6:29694709-29694913:-|nuORF;ENST00000582736.1_1_17:27047023-27047984:+|nuORF;ENST00000606975.1_1_8:163470-182153:-|nuORF	70.39856735676683	0.13906523160059378	2				NaN	NaN	0	NaN	1989	2568	4558
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4560	16.663	NaN	969.14	30	0	490.11	0.106				-1	CANCRVGT	8	17	440.6930226601341	879.3714923870682	2	440.6924743652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_C(Carbamidomethyl (C))ANCRVGT_	ENST00000380262.7_1_17:7847547-7849136:+|nuORF	15.641811463095205	0.7929430624199021	2				NaN	NaN	0	NaN	1990	2568	4558
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4561	16.665	NaN	9056.2	30	0	3330.2	0.036	+			44922	TVAHKIMQK	9	52	352.53885696710563	1054.5947415015169	3	352.5391540527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVAHKIMQK_	ENSG00000134453|ENST00000379888|RBM17	67.49366992349736	0.1516260258713357	2				NaN	NaN	0	NaN	1991	2568	4558
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4579	16.7	NaN	1049.5	30	0	220.94	0.214			+	-1	QEDLSKRICNK	11	45	464.2415771484375	NaN	0	464.2415771484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_QEDLSKRIC(Carbamidomethyl (C))NK_	REV__ENSG00000105793|ENST00000222511|GTPBP10;REV__ENST00000416322.5_1_7:90013079-90014465:+|nuORF;REV__nc|ENSG00000105793|A4D1E9-2|GTPBP10	18.531049691330335	0.456735970842152	2				NaN	NaN	0	NaN	2006	2571	4578
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4580	16.703	NaN	1375.9	30	0	276.7	0.106	+			39161	SSVTPSPAK	9	38	437.237450410239	872.460347887278	2	437.2370910644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSVTPSPAK_	ENSG00000165714|ENST00000314565|BORCS5;ENST00000543990.1_1_12:12510385-12588788:+|nuORF	52.936696900407355	0.27249468807391813	2				NaN	NaN	0	NaN	2007	2571	4578
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4581	16.705	NaN	1011.2	30	0	295.74	0.106			+	-1	LLSECVVSTPL	11	27	406.5519714355469	NaN	0	406.5519714355469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LLSEC(Carbamidomethyl (C))VVSTPL_	REV__ENST00000330817.10_1_22:50294661-50295054:-|nuORF	20.030474535948922	0.456735970842152	2				NaN	NaN	0	NaN	2008	2571	4578
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4582	16.707	NaN	1602.8	30	0	305.19	0.106			+	26188	LSRSGGVR	8	39	416.2424011230469	NaN	0	416.2424011230469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSRSGGVR_	REV__ENST00000399083.1_1_17:19061550-19062206:-|nuORF	29.14955571784316	1.7418937515398478	2				NaN	NaN	0	NaN	2009	2571	4578
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4583	16.709	NaN	723.15	30	0	395.29	0.035	+			16673	HILPGQSID	9	17	327.1786193847656	NaN	0	327.1786193847656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HILPGQSID_	ENSG00000137073|ENST00000379238|UBAP2;UBAP2|p.K381Efs*18|1|0.03|ENSG00000137073|chr9:33948506-33948507|-/G|frameshift_variant;UBAP2|p.L380Sfs*2|1|0.03|ENSG00000137073|chr9:33948507-33948508|-/TT|frameshift_variant	13.45404412870281	0.3914458912562635	2				NaN	NaN	0	NaN	2010	2571	4578
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4597	16.738	NaN	4874.2	30	0	1176.6	0.214	+			40239	STSGGCNLK	9	46	433.70542290073104	865.3962928682621	2	433.70562744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STSGGCNLK_	ENSG00000196586|ENST00000369977|MYO6;nc|ENSG00000196586|Q9UM54-2|MYO6;nc|ENSG00000196586|Q9UM54-4|MYO6;nc|ENSG00000196586|Q9UM54-5|MYO6;nc|ENSG00000196586|Q9UM54-6|MYO6;nc|ENSG00000196586|Q9UM54|MYO6	58.78195531508484	0.22376836668196862	2				NaN	NaN	0	NaN	2021	2574	4596
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4598	16.742	NaN	3004.7	30	0	1080.5	0.039				-1	PTVMLPLPPRP	11	48	411.90435791015625	NaN	0	411.90435791015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_PTVM(Oxidation (M))LPLPPRP_	ENST00000325722.7_1_1:35940504-35944671:-|nuORF	29.550750289552195	0.43372083775723597	2				NaN	NaN	0	NaN	2022	2574	4596
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4616	16.778	NaN	1511.6	30	0	736.69	0.214	+			25100	LLPHLGIDRS	10	31	374.2210112195844	NaN	0	374.2210693359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LLPHLGIDRS_	ENST00000373593.5_1_1:32682924-32686772:-|nuORF	26.69291269510374	0.4125295221340092	2				NaN	NaN	0	NaN	2037	2577	4615
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4617	16.782	NaN	1425	30	0	240.57	0.042			+	-1	TKLSKSFL	8	43	483.2882895592154	NaN	0	483.287353515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))TKLSKSFL_	REV__ENST00000546398.5_1_12:95611596-95687545:+|nuORF	35.61828744233558	1.7418937515398478	2				NaN	NaN	0	NaN	2038	2577	4615
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4652	16.856	NaN	4320.6	30	0	1411.8	0.214	+			22572	KTSSAFVGK	9	51	462.7615356112478	NaN	0	462.7613830566406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTSSAFVGK_	ENSG00000173692|ENST00000308696|PSMD1;nc|ENSG00000173692|Q99460-2|PSMD1;PSMD1-NHEJ1|1|fusion;PSMD1|p.K849Rfs*44|1|0.38|ENSG00000173692|chr2:231165258-231165258|A/-|frameshift_variant;PSMD1|p.L603Afs*7|1|0.19|ENSG00000173692|chr2:231085100-231085101|-/T|frameshift_variant;PSMD1|p.N355Tfs*17|1|0.23|ENSG00000173692|chr2:231077150-231077150|A/-|frameshift_variant	129.42129120953632	0.0006770487180932568	2				NaN	NaN	0	NaN	2067	2583	4651
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4653	16.86	NaN	3545.3	30	0	1523.6	0.035			+	21189	KLATEYKH	8	55	495.27297198250125	NaN	0	495.27252197265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KLATEYKH_	REV__ENSG00000143816|ENST00000272164|WNT9A	38.80614096846853	1.7418937515398478	2				NaN	NaN	0	NaN	2068	2583	4651
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4671	16.897	NaN	1108.6	30	0	107.33	0.214				-1	YLEGQEYRMYN	11	42	494.5505065917969	NaN	0	494.5505065917969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_YLEGQEYRM(Oxidation (M))YN_	ENSG00000070610|ENST00000378103|GBA2;nc|ENSG00000070610|Q9HCG7-2|GBA2;nc|ENSG00000070610|Q9HCG7-3|GBA2	17.833141474888023	0.456735970842152	2				NaN	NaN	0	NaN	2083	2586	4670
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4672	16.901	NaN	1759.4	30	0	335.95	0.106	+			22724	KVAVATPAK	9	50	442.78168707574423	883.5488212182885	2	442.7817077636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVAVATPAK_	ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232323706-232327997:-|nuORF	61.691277971877994	0.19951612995419254	2				NaN	NaN	0	NaN	2084	2586	4670
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4673	16.903	NaN	3475.7	30	0	578.4	0.033	+			3609	ASVSSSVAK	9	48	418.2298127804718	834.4450726277436	2	418.230224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASVSSSVAK_	ENSG00000168564|ENST00000504169|CDKN2AIP	51.19269402634007	0.2889735674168909	2				NaN	NaN	0	NaN	2085	2586	4670
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4691	16.938	NaN	1234.8	30	0	214.78	0.214			+	32541	QVSPTRVLG	9	42	478.77967611901295	955.5447993048259	2	478.7800598144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QVSPTRVLG_	REV__ENSG00000128016|ENST00000597629|ZFP36;REV__ZFP36|p.V330Ffs*2|1|0.35|ENSG00000128016|chr19:39408687-39408688|TG/-|frameshift_variant	68.78682469695295	0.14603441672067394	2				NaN	NaN	0	NaN	2100	2589	4690
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4692	16.942	NaN	1971.1	30	0	578.49	0.034			+	20694	KGPPRRSK	8	47	463.2866516113281	NaN	0	463.2866516113281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KGPPRRSK_	REV__ENSG00000074181|ENST00000263388|NOTCH3	40.77816245573522	1.7418937515398478	2				NaN	NaN	0	NaN	2101	2589	4690
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4727	17.017	NaN	13029	30	0	1872.2	0.142	+			33472	RISSNPVAK	9	70	486.2847199984823	970.5548870637646	2	486.2849426269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RISSNPVAK_	ENSG00000173821|ENST00000582970|RNF213;ENST00000411702.7_1_17:78356744-78367295:+|nuORF;ENST00000427003.7_1_17:78356226-78367295:+|nuORF;nc|ENSG00000173821|Q63HN8-4|RNF213;nc|ENSG00000173821|Q63HN8-6|RNF213;nc|ENSG00000173821|Q63HN8|RNF213;RNF213|p.C5022Lfs*7|1|0.3|ENSG00000173821|chr17:80389237-80389237|G/-|frameshift_variant	106.68306549817024	0.032382560583716295	2				NaN	NaN	0	NaN	2130	2595	4726
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4745	17.055	NaN	21610	30	0	7120.1	0.214	+			22365	KTIDASVSK	9	74	474.7710259737435	947.5274990142871	2	474.7712707519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTIDASVSK_	ENSG00000171681|ENST00000261168|ATF7IP;ENST00000535179.1_1_12:14619386-14628955:+|nuORF;ENST00000537653.5_1_12:14576849-14628955:+|nuORF;nc|ENSG00000171681|Q6VMQ6-2|ATF7IP;nc|ENSG00000171681|Q6VMQ6-4|ATF7IP;nc|ENSG00000171681|Q6VMQ6-5|ATF7IP	156.16072019525166	0.005433163824165674	2				NaN	NaN	0	NaN	2145	2598	4744
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4746	17.059	NaN	5027.1	30	0	1585.2	0.106	+			35043	SADSASLAK	9	52	425.2189660231744	848.4233791131488	2	425.2189025878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SADSASLAK_	ENSG00000120733|ENST00000314358|KDM3B;KDM3B|p.P1317Rfs*10|1|0.45|ENSG00000120733|chr5:138420936-138420936|C/-|frameshift_variant;nc|ENSG00000120733|Q7LBC6-2|KDM3B	138.06239232086	0.011389075116295402	2				NaN	NaN	0	NaN	2146	2598	4744
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4747	17.061	NaN	483.51	30	0	54.162	0.041			+	-1	VCDQSWCRRQ	10	32	465.5391540527344	NaN	0	465.5391540527344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_VC(Carbamidomethyl (C))DQSWC(Carbamidomethyl (C))RRQ_	REV__ADAMTS20|p.G1673Wfs*18|1|0.26|ENSG00000173157|chr12:43376632-43376633|-/A|frameshift_variant;REV__ADAMTS20|p.N1722Tfs*17|1|0.48|ENSG00000173157|chr12:43376291-43376291|T/-|frameshift_variant;REV__ADAMTS20|p.Q1532K|1|0.19|ENSG00000173157|chr12:43383836-43383836|G/T|missense_variant;REV__ENSG00000173157|ENST00000389420|ADAMTS20;REV__nc|ENSG00000173157|P59510|ADAMTS20	31.634271133179894	0.39630454568332174	2				NaN	NaN	0	NaN	2147	2598	4744
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4765	17.099	NaN	12815	30	0	2842.9	0.214				-1	 	0	66	504.8126128185414	1007.6106727038829	2	504.8131408691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2162	2601	4764
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4766	17.102	NaN	2861.9	30	0	850.33	0.106	+			39413	STDQASAIK	9	47	460.73744215239776	919.4603313715955	2	460.7374267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STDQASAIK_	ENSG00000127481|ENST00000375254|UBR4;nc|ENSG00000127481|Q5T4S7-2|UBR4;nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000127481|Q5T4S7-4|UBR4;nc|ENSG00000127481|Q5T4S7-5|UBR4;UBR4|p.C4515Wfs*2|1|0.06|ENSG00000127481|chr1:19095626-19095626|G/-|frameshift_variant;UBR4|p.L4771Cfs*7|1|0.25|ENSG00000127481|chr1:19088878-19088878|G/-|frameshift_variant;UBR4|p.P4047Ifs*4|1|0.4|ENSG00000127481|chr1:19106932-19106933|GG/-|frameshift_variant	112.10723106719422	0.02684780151337622	2				NaN	NaN	0	NaN	2163	2601	4764
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4767	17.104	NaN	2976	30	0	753.36	0.106	+			34542	RVKLPSGSK	9	54	486.30320463986595	970.5918563465319	2	486.303466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RVKLPSGSK_	ENSG00000161016|ENST00000528957|RPL8;ENST00000430538.1_1_21:31635868-31636186:-|nuORF;ENST00000525232.5_1_8:146016635-146016902:-|nuORF	72.87924865735499	0.12833875048249987	2				NaN	NaN	0	NaN	2164	2601	4764
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4768	17.106	NaN	1626.5	30	0	182.89	0.041				-1	WHHMSVWEQR	10	41	471.2149353027344	NaN	0	471.2149353027344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_WHHM(Oxidation (M))SVWEQR_	CACNA1E|p.R772W|1|0.41|ENSG00000198216|chr1:181732400-181732400|C/T|missense_variant	31.634271133179894	0.39630454568332174	2				NaN	NaN	0	NaN	2165	2601	4764
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4803	17.183	NaN	4082	30	0	631.68	0.214	+			37421	SLGPGARAAY	10	63	481.7557228275898	961.4968927219796	2	481.7560729980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLGPGARAAY_	ENST00000284878.11_1_21:18885283-18885484:+|nuORF	39.252832667884924	0.5560298534376815	2				NaN	NaN	0	NaN	2194	2607	4802
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4804	17.186	NaN	1038.4	30	0	259.55	0.034	+			22757	KVEEIAASK	9	41	487.7798716240228	973.5451903148456	2	487.77984619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVEEIAASK_	ENSG00000105640|ENST00000222247|RPL18A;ENST00000401937.3_1_1:33445851-33446070:+|nuORF	45.02220120713402	0.3613509778819777	2				NaN	NaN	0	NaN	2195	2607	4802
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4856	17.3	NaN	2311.5	30	0	788.73	0.214	+			15575	GVGPSGVLQ	9	36	407.2266758627373	812.4387987922746	2	407.2270202636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVGPSGVLQ_	chr7:144259632-144272445|379|10.28|0.0|19.97|-|1|OR2A7,ARHGEF34P|1	37.15910966729921	0.4535818937225704	2				NaN	NaN	0	NaN	2238	2616	4855
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4857	17.304	NaN	961.3	30	0	167.55	0.035			+	13248	GIMAIIFIL	9	37	495.80791429085264	989.6012756485053	2	495.8084716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GIMAIIFIL_	REV__tr|U7STI3|U7STI3_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01068PE=4SV=1	29.841539824830324	0.5243625958137083	2				NaN	NaN	0	NaN	2239	2616	4855
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4875	17.341	NaN	5313	30	0	2904.9	0.214			+	20770	KHQANIRRQ	9	38	384.2240905761719	NaN	0	384.2240905761719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KHQANIRRQ_	REV__PCCB|p.D56N|1|0.63|ENSG00000114054|chr3:136250541-136250541|G/A|missense_variant	32.81241826257853	0.3119040447479903	2				NaN	NaN	0	NaN	2254	2619	4874
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4876	17.345	NaN	3041.6	30	0	726.21	0.106	+			32740	RAPGTRTL	8	52	436.2590234294555	870.503493925711	2	436.2593688964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RAPGTRTL_	ENSG00000173171|ENST00000368376|MTX1;ENST00000440904.1_1_1:155200937-155204113:+|nuORF;ENST00000481771.5_1_1:155181647-155183486:+|nuORF;ENST00000495589.5_1_1:155181271-155183486:+|nuORF;nc|ENSG00000173171|Q13505-2|MTX1;nc|ENSG00000173171|Q13505-3|MTX1	56.72105179125745	0.5342425954139568	2				NaN	NaN	0	NaN	2255	2619	4874
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4877	17.347	NaN	6207.5	30	0	837.99	0.043				-1	KCKPMWCQPRY	11	70	523.9069753144694	1568.699096543608	3	523.5753784179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C),Oxidation (M)	_KC(Carbamidomethyl (C))KPM(Oxidation (M))WC(Carbamidomethyl (C))QPRY_	sp|F5HB52|US08_HCMVMMembraneglycoproteinUS8OS=Humancytomegalovirus(strainMerlin)OX=295027GN=US8PE=3SV=1;sp|P09730|US08_HCMVAUniqueshortUS8glycoproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=US8PE=3SV=2	23.37791116691581	0.7445759747191538	2				NaN	NaN	0	NaN	2256	2619	4874
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4895	17.385	NaN	126980	30	0	55226	0.168	+			14622	GTGKTTFVK	9	79	469.76844121109224	937.5223294889845	2	469.7685852050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTGKTTFVK_	ENSG00000132341|ENST00000543796|RAN;ENST00000464211.6_1_12:131357386-131359105:+|nuORF;ENST00000537745.5_1_12:131357386-131357560:+|nuORF;ENST00000541630.5_1_12:131357386-131357560:+|nuORF	104.01359247289065	0.03510646158778409	2				NaN	NaN	0	NaN	2271	2622	4894
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4896	17.387	NaN	7894	30	0	2464.3	0.106			+	16292	HEGVRAEK	8	64	463.2458259641925	924.477098995185	2	463.2457580566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HEGVRAEK_	REV__ENST00000500537.2_1_11:112834013-112834106:-|nuORF	63.30626980617807	0.4690498839812213	2				NaN	NaN	0	NaN	2272	2622	4894
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4897	17.39	NaN	4130.8	30	0	1248.9	0.106			+	33526	RKVTINAMK	9	56	530.8175757453502	1059.6205985575002	2	530.8189697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RKVTINAMK_	REV__ENSG00000105289|ENST00000541714|TJP3;REV__nc|ENSG00000105289|O95049-3|TJP3;REV__nc|ENSG00000105289|O95049-4|TJP3;REV__nc|ENSG00000105289|O95049-5|TJP3;REV__TJP3|p.G399Afs*31|1|0.15|ENSG00000105289|chr19:3736229-3736229|G/-|frameshift_variant;REV__TJP3|p.P829Afs*7|1|0.33|ENSG00000105289|chr19:3747948-3747949|-/G|frameshift_variant;REV__TJP3|p.Y830Tfs*64|1|0.18|ENSG00000105289|chr19:3747949-3747949|G/-|frameshift_variant	60.11826168202944	0.21262886028301267	2				NaN	NaN	0	NaN	2273	2622	4894
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4898	17.391	NaN	3942.1	30	0	1660.8	0.106	+			12861	GEQILILWK	9	37	367.22032455592023	1098.6391442679608	3	367.2205505371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEQILILWK_	ENSG00000257093|ENST00000536163|DENND11	30.317721548370564	0.5199124245378496	2				NaN	NaN	0	NaN	2274	2622	4894
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4899	17.393	NaN	2927.8	30	0	1535.3	0.106	+			6184	AVQNLPTKK	9	31	333.53781063945877	NaN	0	333.5379333496094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVQNLPTKK_	ENSG00000146376|ENST00000368149|ARHGAP18;nc|ENSG00000146376|Q8N392-2|ARHGAP18	27.882242232435846	0.3367954786602879	2				NaN	NaN	0	NaN	2275	2622	4894
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4900	17.395	NaN	1111.1	30	0	159.26	0.033			+	29494	PCVLSLVY	8	42	447.2454528808594	NaN	0	447.2454528808594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PCVLSLVY_	REV__ENSG00000163293|ENST00000295461|NIPAL1;REV__NIPAL1|p.S365Nfs*17|1|0.05|ENSG00000163293|chr4:48036032-48036033|-/ATAAGATG|frameshift_variant;REV__NIPAL1|p.Y66*|1|0.29|ENSG00000163293|chr4:48025218-48025219|AC/-|frameshift_variant	46.76643321282427	1.7418937515398478	2				NaN	NaN	0	NaN	2276	2622	4894
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4930	17.458	NaN	4892.8	30	0	1410.4	0.214	+			12189	GANVPTTAK	9	45	429.7375835304359	857.4606141276719	2	429.738037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GANVPTTAK_	ENSG00000083535|ENST00000326291|PIBF1;nc|ENSG00000083535|Q8WXW3-2|PIBF1	77.31757898189308	0.1091473830098891	2				NaN	NaN	0	NaN	2300	2628	4929
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4931	17.462	NaN	2478.2	30	0	196.83	0.036	+			38443	SSALTIHKII	10	63	541.8324420952175	NaN	0	541.83203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSALTIHKII_	ZNF479|p.R401I|1|0.22|ENSG00000185177|chr7:57120213-57120213|C/A|missense_variant	36.31764250033197	0.3809266711384728	2				NaN	NaN	0	NaN	2301	2628	4929
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4949	17.498	NaN	5927.3	30	0	2737.7	0.146			+	-1	KMLIRQIRQ	9	41	401.2444311508916	1200.7114640528748	3	401.2452697753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_KM(Oxidation (M))LIRQIRQ_	REV__ENST00000296543.9_1_4:140306054-140306093:+|nuORF	32.81241826257853	0.4965981579233955	2				NaN	NaN	0	NaN	2316	2631	4948
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4967	17.538	NaN	1417	30	0	353.55	0.214	+			20151	KEKPTTAL	8	47	444.2635803222656	NaN	0	444.2635803222656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEKPTTAL_	ENSG00000129351|ENST00000588657|ILF3;ENST00000587928.5_1_19:10781281-10792148:+|nuORF;nc|ENSG00000129351|Q12906-2|ILF3;nc|ENSG00000129351|Q12906-3|ILF3;nc|ENSG00000129351|Q12906-4|ILF3;nc|ENSG00000129351|Q12906-5|ILF3;nc|ENSG00000129351|Q12906-6|ILF3;nc|ENSG00000129351|Q12906|ILF3	76.7741389293348	1.7418937515398478	2				NaN	NaN	0	NaN	2331	2634	4966
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4968	17.541	NaN	1462.9	30	0	308.68	0.032	+			2869	ASAPSVAGK	9	40	394.21923402557263	NaN	0	394.21905517578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASAPSVAGK_	ENSG00000078687|ENST00000696270|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C	71.87747018426188	0.0992163553043454	2				NaN	NaN	0	NaN	2332	2634	4966
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4986	17.578	NaN	1329.8	30	0	611.33	0.141	+			1698	AGVAEVAGGL	10	31	422.2322998046875	NaN	0	422.2322998046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AGVAEVAGGL_	ENSG00000122707|ENST00000377966|RECK;ENST00000475774.5_1_9:36036974-36058840:+|nuORF;ENST00000479053.1_1_9:36036974-36085209:+|nuORF;RECK|p.K442Nfs*27|1|0.1|ENSG00000122707|chr9:36102116-36102116|A/-|frameshift_variant;RECK|p.N685Tfs*12|2|0.31|ENSG00000122707|chr9:36112464-36112464|A/-|frameshift_variant	29.14955571784316	0.4044631218331212	2				NaN	NaN	0	NaN	2347	2637	4985
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5004	17.618	NaN	3988.5	30	0	591.32	0.142	+			34060	RSMNSALGK	9	70	482.2555040987701	962.4964552643402	2	482.25543212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RSMNSALGK_	ENSG00000106305|ENST00000223029|AIMP2;nc|ENSG00000106305|Q13155-2|AIMP2	104.01359247289065	0.03510646158778409	2				NaN	NaN	0	NaN	2362	2640	5003
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5039	17.695	NaN	2280.7	30	0	440.2	0.141	+			896	AEHPGTRL	8	43	440.73569113917694	NaN	0	440.7356872558594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEHPGTRL_	ENSG00000163781|ENST00000260810|TOPBP1;TOPBP1|p.K1266Nfs*10|1|0.13|ENSG00000163781|chr3:133616887-133616887|T/-|frameshift_variant;TOPBP1|p.R1378Sfs*18|1|0.04|ENSG00000163781|chr3:133611043-133611044|-/AAAAGAGAATGTG|frameshift_variant;TOPBP1|p.R964Efs*12|1|0.19|ENSG00000163781|chr3:133624090-133624090|T/-|frameshift_variant	45.9519527083369	1.7418937515398478	2				NaN	NaN	0	NaN	2391	2646	5038
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5057	17.734	NaN	7226.7	30	0	819.11	0.15			+	-1	PLSWCCSWSLW	11	58	494.550252276316	1480.628927429148	3	494.88494873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_PLSWC(Carbamidomethyl (C))C(Carbamidomethyl (C))SWSLW_	REV__ENST00000405546.7_1_2:242612072-242612480:+|nuORF	30.568863376406313	0.6691487505135859	2				NaN	NaN	0	NaN	2406	2649	5056
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5075	17.773	NaN	8380.2	30	0	1799.1	0.214	+			20686	KGPGAARAL	9	50	420.7558804542336	839.4972079752672	2	420.7563781738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KGPGAARAL_	ENST00000483273.2_1_1:16133986-16134037:-|nuORF	68.78682469695295	0.14603441672067394	2				NaN	NaN	0	NaN	2421	2652	5074
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5076	17.776	NaN	4350.9	30	0	675.65	0.106	+			17243	HVVAASKAM	9	53	457.24935203475957	912.4841511363192	2	457.24932861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HVVAASKAM_	ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;ENST00000565932.5_1_16:28734455-28746831:+|nuORF;ENST00000569005.5_1_16:28743506-28746001:+|nuORF;nc|ENSG00000184110|Q99613-2|EIF3C	98.62937762414208	0.04060045538121712	2				NaN	NaN	0	NaN	2422	2652	5074
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5077	17.778	NaN	676.98	30	0	134.85	0.034			+	31632	QMLEPKQV	8	31	486.763916015625	NaN	0	486.763916015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QMLEPKQV_	REV__ENSG00000166716|ENST00000560079|ZNF592	26.69291269510374	1.7418937515398478	2				NaN	NaN	0	NaN	2423	2652	5074
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5095	17.814	NaN	4071.7	30	0	540.09	0.215	+			34120	RSSEPGKLK	9	69	501.28995115044614	1000.5653493676923	2	501.2906494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RSSEPGKLK_	ENSG00000101871|ENST00000317552|MID1;nc|ENSG00000101871|O15344-2|MID1	96.66504779109242	0.04607440320619715	2				NaN	NaN	0	NaN	2438	2655	5094
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5096	17.818	NaN	2636	30	0	803.29	0.033	+			41867	SVTGVTASK	9	42	425.2372960271774	848.4600391211549	2	425.2373962402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVTGVTASK_	ENSG00000153046|ENST00000397588|CDYL;ENST00000472453.5_1_6:4776866-4954287:+|nuORF;nc|ENSG00000153046|Q9Y232-3|CDYL;nc|ENSG00000153046|Q9Y232-4|CDYL;nc|ENSG00000153046|Q9Y232|CDYL	56.43379154798735	0.2433427591689151	2				NaN	NaN	0	NaN	2439	2655	5094
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5114	17.854	NaN	2309.8	30	0	226.59	0.142	+			16517	HEVEKSEI	8	52	485.74529998754286	969.4760470418857	2	485.7452087402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HEVEKSEI_	ENSG00000050405|ENST00000341247|LIMA1;LIMA1|p.T536Lfs*38|2|0.4|ENSG00000050405|chr12:50177739-50177739|G/-|frameshift_variant;nc|ENSG00000050405|Q9UHB6-2|LIMA1;nc|ENSG00000050405|Q9UHB6-4|LIMA1;nc|ENSG00000050405|Q9UHB6-5|LIMA1	79.71258880314673	0.32596852995588826	2				NaN	NaN	0	NaN	2454	2658	5113
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5132	17.893	NaN	8047.2	30	0	1019.1	0.214	+			43090	TENPHGARL	9	66	497.75673181146516	993.4989106897303	2	497.7570495605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TENPHGARL_	ENSG00000243725|ENST00000371281|TTC4	95.81516180277367	0.04847050768394289	2				NaN	NaN	0	NaN	2469	2661	5131
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5133	17.896	NaN	3559.1	30	0	1680.6	0.106	+			24424	LGASGKYQ	8	39	412.21882677456557	822.4231006159312	2	412.2191467285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LGASGKYQ_	ENSG00000080854|ENST00000533871|IGSF9B;IGSF9B|p.E216Rfs*61|1|0.28|ENSG00000080854|chr11:133937409-133937409|C/-|frameshift_variant;IGSF9B|p.T1083Hfs*72|2|0.42|ENSG00000080854|chr11:133920478-133920479|-/G|frameshift_variant;IGSF9B|p.T1083Pfs*48|1|0.11|ENSG00000080854|chr11:133920479-133920479|G/-|frameshift_variant;nc|ENSG00000080854|Q9UPX0|IGSF9B	35.200714571348534	0.6875396545722289	2				NaN	NaN	0	NaN	2470	2661	5131
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5134	17.898	NaN	2004.7	30	0	412.77	0.106	+			20271	KENLEKTRHTL	11	39	456.9248962402344	NaN	0	456.9248962402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KENLEKTRHTL_	ENSG00000177469|ENST00000357037|CAVIN1;nc|ENSG00000177469|Q6NZI2-2|CAVIN1;nc|ENSG00000177469|Q6NZI2-3|CAVIN1	15.920654212697714	0.456735970842152	2				NaN	NaN	0	NaN	2471	2661	5131
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5135	17.9	NaN	17950	30	0	2579.1	0.044			+	51005	YIWEDYRHSWR	11	101	537.5882529561106	1609.7429294685317	3	537.5900268554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YIWEDYRHSWR_	REV__ENSG00000129292|ENST00000395386|PHF20L1;REV__ENST00000361997.9_1_8:133790074-133829825:+|nuORF;REV__ENST00000395383.5_1_8:133790074-133836319:+|nuORF;REV__nc|ENSG00000129292|A8MW92-2|PHF20L1;REV__nc|ENSG00000129292|A8MW92-4|PHF20L1;REV__PHF20L1-CHMP1A|1|fusion;REV__PHF20L1|p.E981Gfs*15|1|0.18|ENSG00000129292|chr8:132845806-132845807|-/G|frameshift_variant;REV__PHF20L1|p.K574Rfs*28|1|0.31|ENSG00000129292|chr8:132825341-132825341|A/-|frameshift_variant;REV__PHF20L1|p.N322Mfs*42|5|0.3|ENSG00000129292|chr8:132814664-132814664|A/-|frameshift_variant;REV__PHF20L1|p.V535*|4|0.38|ENSG00000129292|chr8:132824019-132824019|A/-|frameshift_variant	17.468008924990375	0.788697330333842	2				NaN	NaN	0	NaN	2472	2661	5131
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5153	17.936	NaN	104230	30	0	46181	0.214	+			14617	GTGKTLIGK	9	81	437.7712532425359	873.5279535518719	2	437.7711486816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTGKTLIGK_	ENSG00000132436|ENST00000433017|FIGNL1;FIGNL1|p.C453R|1|0.23|ENSG00000132436|chr7:50445931-50445931|A/G|missense_variant;nc|ENSG00000132436|Q6PIW4-2|FIGNL1	114.8945686534367	0.024290463251177924	2				NaN	NaN	0	NaN	2487	2664	5152
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5154	17.939	NaN	28479	30	0	2185.4	0.106			+	27763	MREWCLQGPMA	11	74	465.53919433197785	1393.5957535961336	3	465.53924560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))REWC(Carbamidomethyl (C))LQGPMA_	REV__ENST00000246194.7_1_20:32659989-32661416:+|nuORF	58.62960593111931	0.3356877741313683	2				NaN	NaN	0	NaN	2488	2664	5152
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5155	17.941	NaN	4961.7	30	0	1470.5	0.106				-1	 	0	58	501.7946202937106	1001.5746876542212	2	501.7946472167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2489	2664	5152
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5156	17.943	NaN	604.17	30	0	322.6	0.106			+	29797	PIWLVSDNL	9	23	528.7879638671875	NaN	0	528.7879638671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PIWLVSDNL_	REV__ENSG00000113532|ENST00000231461|ST8SIA4;REV__ST8SIA4|p.A227D|1|0.3|ENSG00000113532|chr5:100856220-100856220|G/T|missense_variant;REV__ST8SIA4|p.F303Lfs*8|1|0.06|ENSG00000113532|chr5:100812021-100812022|-/TGTGTAAA|frameshift_variant	26.79610172149135	0.34227917631780574	2				NaN	NaN	0	NaN	2490	2664	5152
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5157	17.945	NaN	21161	30	0	12082	0.106	+			2844	ASAKSIDSK	9	67	453.7478237403928	905.4810945475856	2	453.7296447753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASAKSIDSK_	CEP170|p.A226Qfs*31|1|0.08|ENSG00000143702|chr1:243191450-243191451|-/CATTG|frameshift_variant;CEP170|p.N204Tfs*11|1|0.26|ENSG00000143702|chr1:243199080-243199080|T/-|frameshift_variant;CEP170|p.N481Ifs*26|1|0.13|ENSG00000143702|chr1:243185903-243185903|T/-|frameshift_variant;CEP170|p.T718Pfs*5|1|0.11|ENSG00000143702|chr1:243165808-243165808|T/-|frameshift_variant;CEP170|p.V1192Yfs*26|1|0.1|ENSG00000143702|chr1:243164387-243164387|T/-|frameshift_variant;ENSG00000143702|ENST00000366542|CEP170;ENST00000502249.6_1_4:119388789-119401509:+|nuORF;nc|ENSG00000143702|Q5SW79-2|CEP170;nc|ENSG00000143702|Q5SW79-3|CEP170	79.71258880314673	0.09879134589249085	2				NaN	NaN	0	NaN	2491	2664	5152
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5158	17.947	NaN	686.7	30	0	137.66	0.034			+	-1	GFNFEVAC	8	33	472.2020263671875	NaN	0	472.2020263671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_GFNFEVAC(Carbamidomethyl (C))_	REV__ENSG00000105323|ENST00000392006|HNRNPUL1;REV__ENSG00000153187|ENST00000640218|HNRNPU;REV__ENST00000468690.2_2_1:245021279-245021477:-|nuORF;REV__nc|ENSG00000105323|Q9BUJ2-2|HNRNPUL1;REV__nc|ENSG00000105323|Q9BUJ2-3|HNRNPUL1;REV__nc|ENSG00000105323|Q9BUJ2-4|HNRNPUL1;REV__nc|ENSG00000153187|Q00839-2|HNRNPU	20.481830146152948	1.741893751539848	2				NaN	NaN	0	NaN	2492	2664	5152
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5159	17.947	NaN	775.4	30	0	161.17	0.138			+	12925	GESKGPMR	8	31	431.21588134765625	NaN	0	431.21588134765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GESKGPMR_	REV__ENSG00000172264|ENST00000684519|MACROD2;REV__nc|ENSG00000172264|A1Z1Q3-4|MACROD2;REV__nc|ENSG00000172264|A1Z1Q3-5|MACROD2;REV__nc|ENSG00000172264|A1Z1Q3-6|MACROD2;REV__nc|ENSG00000172264|A1Z1Q3|MACROD2	29.14955571784316	1.7418937515398478	2				NaN	NaN	0	NaN	2493	2664	5152
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5177	17.985	NaN	160690	30	0	40526	0.214	+			19419	KAPSAARSL	9	95	450.7664557287249	NaN	0	450.7664794921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAPSAARSL_	ENSG00000083937|ENST00000263780|CHMP2B;ENST00000466696.1_1_3:87302513-87302969:+|nuORF;nc|ENSG00000083937|Q9UQN3-2|CHMP2B	59.93077597824379	0.14961415694175798	2				NaN	NaN	0	NaN	2508	2667	5176
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5178	17.988	NaN	45075	30	0	26701	0.106	+			32321	QTSGSLVSK	9	77	453.7478237403928	905.4810945475856	2	453.7479248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QTSGSLVSK_	ENSG00000168564|ENST00000504169|CDKN2AIP	101.45984612302182	0.0377122763612125	2				NaN	NaN	0	NaN	2509	2667	5176
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5179	17.991	NaN	4674	30	0	1016.4	0.106	+			4324	ATGKWKQISK	10	54	382.8922699477388	NaN	0	382.8922424316406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATGKWKQISK_	ENSG00000127080|ENST00000287996|IPPK	50.79123845855914	0.30060015553440317	2				NaN	NaN	0	NaN	2510	2667	5176
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5180	17.992	NaN	3552.2	30	0	1238.9	0.106			+	43349	TGATPKGLA	9	49	408.23457355859136	814.4545941839827	2	408.2348327636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TGATPKGLA_	REV__ENSG00000184368|ENST00000379643|MAP7D2;REV__ENST00000466145.1_1_X:20039663-20043970:-|nuORF;REV__nc|ENSG00000184368|Q96T17-4|MAP7D2;REV__nc|ENSG00000184368|Q96T17-5|MAP7D2;REV__nc|ENSG00000184368|Q96T17|MAP7D2	71.87747018426188	0.13267044672804276	2				NaN	NaN	0	NaN	2511	2667	5176
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5181	17.994	NaN	5116.9	30	0	3292	0.106	+			15700	GVNDSPALKK	10	31	343.52901202716964	1027.565206681709	3	343.5292053222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GVNDSPALKK_	ENSG00000018625|ENST00000361216|ATP1A2;ENSG00000075673|ENST00000381946|ATP12A;ENSG00000105409|ENST00000648268|ATP1A3;ENSG00000105675|ENST00000262623|ATP4A;ENSG00000132681|ENST00000368081|ATP1A4;ENSG00000163399|ENST00000295598|ATP1A1;ENST00000418334.5_1_1:160144048-160152563:+|nuORF;ENST00000472488.5_1_1:160085570-160106822:+|nuORF;nc|ENSG00000075673|P54707-2|ATP12A;nc|ENSG00000105409|P13637-2|ATP1A3;nc|ENSG00000105409|P13637-3|ATP1A3;nc|ENSG00000163399|P05023-3|ATP1A1;nc|ENSG00000163399|P05023-4|ATP1A1	19.1035232394073	0.7193765342308498	2				NaN	NaN	0	NaN	2512	2667	5176
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5182	17.996	NaN	360.58	30	0	58.211	0.035	+			45449	TWFLRKPS	8	24	517.7910766601562	NaN	0	517.7910766601562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TWFLRKPS_	ENST00000497543.5_1_3:75471615-75471942:-|nuORF	18.324413293986947	1.7418937515398478	2				NaN	NaN	0	NaN	2513	2667	5176
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5183	17.997	NaN	891.77	30	0	146.97	0.139	+			29964	PNSKVESK	8	41	444.7423218844934	NaN	0	444.7419738769531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PNSKVESK_	ENSG00000055609|ENST00000262189|KMT2C;KMT2C|p.F4496Lfs*21|3|0.28|ENSG00000055609|chr7:152148439-152148439|A/-|frameshift_variant;KMT2C|p.I4868Lfs*37|1|0.28|ENSG00000055609|chr7:152138837-152138837|T/-|frameshift_variant;KMT2C|p.K2867Dfs*7|1|0.28|ENSG00000055609|chr7:152176853-152176854|TT/-|frameshift_variant;KMT2C|p.T3715Qfs*4|1|0.34|ENSG00000055609|chr7:152162434-152162434|T/-|frameshift_variant;nc|ENSG00000055609|Q8NEZ4-2|KMT2C;nc|ENSG00000055609|Q8NEZ4-3|KMT2C	62.107414245175825	1.7418937515398478	2				NaN	NaN	0	NaN	2514	2667	5176
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5201	18.034	NaN	4578.1	30	0	428.1	0.214			+	32859	RDALKSLQ	8	62	465.7717383495236	929.5289237658473	2	465.7716979980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RDALKSLQ_	REV__ENSG00000109756|ENST00000691494|RAPGEF2;REV__nc|ENSG00000109756|Q9Y4G8|RAPGEF2	54.776311868738084	0.5534952410049249	2				NaN	NaN	0	NaN	2529	2670	5200
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5202	18.038	NaN	5319.2	30	0	981.45	0.106	+			27058	MADPKGKAY	9	62	490.7467519078637	979.4789508825274	2	490.7469177246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MADPKGKAY_	ENSG00000137038|ENST00000358227|DMAC1;ENST00000469050.1_1_9:7798575-7833931:-|nuORF;ENST00000484082.1_1_9:7798575-7800059:-|nuORF;nc|ENSG00000137038|Q96GE9|DMAC1	90.36981228632155	0.0638227155548745	2				NaN	NaN	0	NaN	2530	2670	5200
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5203	18.04	NaN	3917.2	30	0	1129.4	0.034	+			40301	STSSSSPLR	9	47	461.2351619909324	920.4557710486648	2	461.2352600097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STSSSSPLR_	ENST00000223023.4_1_7:123388889-123389093:-|nuORF	118.74307786436346	0.02196067127630568	2				NaN	NaN	0	NaN	2531	2670	5200
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5222	18.078	NaN	62136	30	0	6415	0.214				-1	 	0	83	471.5426567798855	1411.6061409398565	3	471.5428771972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2547	2673	5221
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5223	18.081	NaN	17536	30	0	1923.7	0.106			+	32708	RAKLVEQVK	9	85	357.56064778865266	1069.660113966158	3	357.5606689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RAKLVEQVK_	REV__ENSG00000075240|ENST00000406902|GRAMD4;REV__GRAMD4|p.M533Ifs*29|1|0.42|ENSG00000075240|chr22:46676620-46676621|-/CCAGGCTCAGGCATTG|frameshift_variant	76.7741389293348	0.11149722112137898	2				NaN	NaN	0	NaN	2548	2673	5221
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5224	18.083	NaN	4483.1	30	0	1730.5	0.106			+	43401	TGIAPPNR	8	44	413.2321650401889	824.4497771471778	2	413.23236083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TGIAPPNR_	REV__ENST00000232854.8_1_3:50606657-50608415:+|nuORF	73.97473282117947	0.3737790450121076	2				NaN	NaN	0	NaN	2549	2673	5221
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5225	18.085	NaN	718.41	30	0	141.35	0.106	+			10885	FCHNFHKLN	9	27	580.2752075195312	NaN	0	580.2752075195312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FCHNFHKLN_	CAPN6|p.R332H|1|0.07|ENSG00000077274|chrX:111251080-111251080|C/T|missense_variant	12.959181472943097	0.3931207604263714	2				NaN	NaN	0	NaN	2550	2673	5221
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5226	18.087	NaN	1337	30	0	227.5	0.033	+			49595	VYGKSSHL	8	45	445.7400207519531	NaN	0	445.7400207519531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VYGKSSHL_	ENSG00000119138|ENST00000377126|KLF9;ENSG00000169926|ENST00000307145|KLF13	51.33545320467046	1.7418937515398478	2				NaN	NaN	0	NaN	2551	2673	5221
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5244	18.125	NaN	3983.4	30	0	1194.6	0.214	+			4275	ATGGMANVK	9	46	424.7186236285464	847.4226943238929	2	424.7186279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATGGMANVK_	ENSG00000136936|ENST00000375128|XPA;XPA|p.A65T|1|0.24|ENSG00000136936|chr9:97693739-97693739|C/T|missense_variant	162.25246889848123	0.0040893836092247005	2				NaN	NaN	0	NaN	2566	2676	5243
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5245	18.128	NaN	2401.7	30	0	383.52	0.106	+			26277	LSTQLAGVH	9	46	463.2589236837504	NaN	0	463.2589416503906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSTQLAGVH_	FHOD3|p.G40S|1|0.39|ENSG00000134775|chr18:36297953-36297953|G/A|missense_variant	51.33545320467046	0.19748963086191895	2				NaN	NaN	0	NaN	2567	2676	5243
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5246	18.13	NaN	496.43	30	0	47.247	0.106	+			16454	HESVSKIST	9	37	494.258544921875	NaN	0	494.258544921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HESVSKIST_	ENSG00000096696|ENST00000379802|DSP;nc|ENSG00000096696|P15924-2|DSP;nc|ENSG00000096696|P15924-3|DSP	44.377184641726394	0.24544280798894275	2				NaN	NaN	0	NaN	2568	2676	5243
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5247	18.132	NaN	1216.4	30	0	353.73	0.034	+			14390	GTAKSQLLK	9	52	473.2894287109375	NaN	0	473.2894287109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTAKSQLLK_	ENSG00000100297|ENST00000216122|MCM5;ENST00000493076.5_1_22:35806581-35817581:+|nuORF	42.86426827375447	0.2558691296974908	2				NaN	NaN	0	NaN	2569	2676	5243
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5265	18.168	NaN	773.14	30	0	129.35	0.214			+	35425	SARPVAAAG	9	35	400.2243709795628	NaN	0	400.2238464355469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SARPVAAAG_	REV__ENST00000431679.5_2_7:99195910-99202172:+|nuORF	30.503639358989545	0.3235605894931338	2				NaN	NaN	0	NaN	2584	2679	5264
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5266	18.172	NaN	3890.2	30	0	491.7	0.04			+	20804	KIEAQMKLKQQ	11	64	448.9275207519531	NaN	0	448.9275207519531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KIEAQMKLKQQ_	REV__ENSG00000213085|ENST00000368099|CFAP45;REV__ENST00000475911.2_1_1:159846344-159850487:-|nuORF;REV__nc|ENSG00000213085|Q9UL16-2|CFAP45	52.167168403610894	0.2997533183531877	2				NaN	NaN	0	NaN	2585	2679	5264
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5302	18.247	NaN	192080	30	0	45539	0.215	+			38505	SSAVTSVAK	9	98	425.2370769324469	848.4596009316938	2	425.2373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSAVTSVAK_	ENSG00000165949|ENST00000612813|IFI27;nc|ENSG00000165949|P40305-1|IFI27	190.2614974402762	0.00026591377982909756	2				NaN	NaN	0	NaN	2615	2685	5301
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5303	18.25	NaN	23441	30	0	1563.7	0.106	+			32982	REEEKVSAV	9	78	523.7767233759824	1045.5388938187648	2	523.77783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_REEEKVSAV_	ENSG00000140262|ENST00000333725|TCF12;nc|ENSG00000140262|Q99081-2|TCF12;nc|ENSG00000140262|Q99081-4|TCF12;nc|ENSG00000140262|Q99081|TCF12	112.10723106719422	0.02684780151337622	2				NaN	NaN	0	NaN	2616	2685	5301
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5304	18.253	NaN	3493.1	30	0	1000.3	0.106			+	1523	AGAMEQLR	8	48	438.2235798511537	874.4326067691075	2	438.223388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AGAMEQLR_	REV__GAPVD1|p.I676M|1|0.05|ENSG00000165219|chr9:125326585-125326585|T/G|missense_variant	65.80317337860623	0.44433089765398776	2				NaN	NaN	0	NaN	2617	2685	5301
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5305	18.254	NaN	6267.1	30	0	2271.1	0.106	+			48796	VVAAGGVEK	9	52	415.2423350793366	828.4701172254732	2	415.2423400878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVAAGGVEK_	ENSG00000103485|ENST00000395384|QPRT	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	2618	2685	5301
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5306	18.256	NaN	1313.7	30	0	255.5	0.106	+			31580	QLRSSKKYK	9	29	379.89624480224256	NaN	0	380.2306823730469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QLRSSKKYK_	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42|TTN;TTN|p.A12650Gfs*4|1|0.4|ENSG00000155657|chr2:178633489-178633490|-/T|frameshift_variant;TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;TTN|p.A7105Cfs*8|1|0.32|ENSG00000155657|chr2:178722523-178722524|-/A|frameshift_variant;TTN|p.D20259Rfs*40|1|0.44|ENSG00000155657|chr2:178583105-178583106|-/T|frameshift_variant;TTN|p.D21555Ifs*6|1|0.33|ENSG00000155657|chr2:178576659-178576659|G/-|frameshift_variant;TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;TTN|p.D9026Afs*9|1|0.26|ENSG00000155657|chr2:178711205-178711208|CTGT/-|frameshift_variant;TTN|p.E15132Sfs*22|1|0.27|ENSG00000155657|chr2:178612094-178612094|C/-|frameshift_variant;TTN|p.E20392Dfs*6|1|0.04|ENSG00000155657|chr2:178582357-178582358|-/TTTAAAATTA|frameshift_variant;TTN|p.E20392Kfs*4|1|0.02|ENSG00000155657|chr2:178582359-178582360|-/TTTT|frameshift_variant;TTN|p.E9224Gfs*8|1|0.04|ENSG00000155657|chr2:178709697-178709698|-/TCTTATGATATCTTGAC|frameshift_variant;TTN|p.F18705Lfs*8|1|0.37|ENSG00000155657|chr2:178590687-178590687|A/-|frameshift_variant;TTN|p.G12742Vfs*2|1|0.05|ENSG00000155657|chr2:178632983-178632983|C/-|frameshift_variant;TTN|p.G14712Dfs*11|1|0.37|ENSG00000155657|chr2:178614341-178614341|G/-|frameshift_variant;TTN|p.G19920Afs*12|1|0.42|ENSG00000155657|chr2:178584961-178584961|G/-|frameshift_variant;TTN|p.G22029Efs*22|2|0.13|ENSG00000155657|chr2:178575125-178575125|T/-|frameshift_variant;TTN|p.I10495Nfs*4|1|0.37|ENSG00000155657|chr2:178685288-178685289|-/T|frameshift_variant;TTN|p.I24998Nfs*2|1|0.35|ENSG00000155657|chr2:178566216-178566217|-/T|frameshift_variant;TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;TTN|p.I9225Cfs*34|1|0.06|ENSG00000155657|chr2:178709695-178709696|-/ATATCCATGAGCA|frameshift_variant;TTN|p.K10923Rfs*104|2|0.23|ENSG00000155657|chr2:178679362-178679362|T/-|frameshift_variant;TTN|p.K11381Nfs*25|1|0.07|ENSG00000155657|chr2:178671133-178671133|T/-|frameshift_variant;TTN|p.K11556Sfs*15|1|0.39|ENSG00000155657|chr2:178652287-178652287|T/-|frameshift_variant;TTN|p.K14271Qfs*5|1|0.02|ENSG00000155657|chr2:178617351-178617352|-/G|frameshift_variant;TTN|p.K26626Nfs*34|1|0.34|ENSG00000155657|chr2:178561331-178561331|T/-|frameshift_variant;TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant;TTN|p.L7142*|1|0.06|ENSG00000155657|chr2:178722407-178722411|TCTTA/-|frameshift_variant;TTN|p.N13487Tfs*49|1|0.34|ENSG00000155657|chr2:178621335-178621335|T/-|frameshift_variant;TTN|p.N15496Ifs*16|1|0.09|ENSG00000155657|chr2:178610116-178610116|T/-|frameshift_variant;TTN|p.N7648Tfs*27|1|0.32|ENSG00000155657|chr2:178719598-178719598|T/-|frameshift_variant;TTN|p.N8964Tfs*27|1|0.11|ENSG00000155657|chr2:178711988-178711988|T/-|frameshift_variant;TTN|p.P16126Rfs*3|1|0.25|ENSG00000155657|chr2:178607301-178607302|TG/-|frameshift_variant;TTN|p.P22810Hfs*10|1|0.03|ENSG00000155657|chr2:178572780-178572781|-/AAAT|frameshift_variant;TTN|p.V10632Yfs*16|1|0.16|ENSG00000155657|chr2:178683254-178683254|T/-|frameshift_variant;TTN|p.V11008Sfs*13|1|0.33|ENSG00000155657|chr2:178678146-178678147|-/T|frameshift_variant;TTN|p.V11345Ffs*4|1|0.4|ENSG00000155657|chr2:178672044-178672044|T/-|frameshift_variant;TTN|p.V13823*|1|0.28|ENSG00000155657|chr2:178620027-178620027|C/-|frameshift_variant;TTN|p.V22573Cfs*4|2|0.31|ENSG00000155657|chr2:178573492-178573492|C/-|frameshift_variant;TTN|p.V27442Cfs*4|1|0.05|ENSG00000155657|chr2:178558107-178558108|-/A|frameshift_variant	19.996771675451527	0.3693019437812985	2				NaN	NaN	0	NaN	2619	2685	5301
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5307	18.258	NaN	472.72	30	0	91.995	0.038			+	-1	GLKMLHQICR	10	24	405.55401611328125	NaN	0	405.55401611328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_GLKM(Oxidation (M))LHQICR_	REV__ENST00000357277.7_1_X:17043263-17065533:+|nuORF	18.262085536374414	0.4201028297492154	2				NaN	NaN	0	NaN	2620	2685	5301
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5308	18.259	NaN	414.2	30	0	91.129	0.139			+	-1	SCDQIVQI	8	27	481.7333679199219	NaN	0	481.7333679199219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_SC(Carbamidomethyl (C))DQIVQI_	REV__ENSG00000130787|ENST00000253083|HIP1R;REV__ENST00000452196.6_1_12:123320097-123341792:+|nuORF;REV__ENST00000535831.5_1_12:123319379-123341792:+|nuORF;REV__HIP1R|p.A781Pfs*24|1|0.19|ENSG00000130787|chr12:122859467-122859467|G/-|frameshift_variant;REV__HIP1R|p.E1021Vfs*2|1|0.32|ENSG00000130787|chr12:122861412-122861445|AGAGGAGGTGGCCATCCGGCCCAGCACTGCCCCC/-|frameshift_variant;REV__HIP1R|p.N345Mfs*4|3|0.29|ENSG00000130787|chr12:122855584-122855584|C/-|frameshift_variant;REV__nc|ENSG00000130787|O75146-2|HIP1R	25.450171626174864	1.7418937515398478	2				NaN	NaN	0	NaN	2621	2685	5301
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5322	18.289	NaN	34117	30	0	9531.4	0.214				-1	 	0	70	401.1901655605534	800.3657781879068	2	401.1904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2632	2688	5321
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5323	18.292	NaN	6281	30	0	927.83	0.106	+			32949	REDAARAIA	9	57	486.7643255939852	971.5140982547704	2	486.7645263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_REDAARAIA_	ENSG00000130811|ENST00000253108|EIF3G;ENST00000590158.1_1_19:10225792-10226817:-|nuORF	67.49366992349736	0.1516260258713357	2				NaN	NaN	0	NaN	2633	2688	5321
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5324	18.294	NaN	3256.6	30	0	469.74	0.106			+	1707	AGVKPPLN	8	44	398.2388970871922	794.4632412411844	2	398.2390441894531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AGVKPPLN_	REV__ENSG00000138771|ENST00000296043|SHROOM3;REV__ENST00000486758.5_1_4:77631429-77663226:+|nuORF;REV__SHROOM3|p.T1603Nfs*9|1|0.64|ENSG00000138771|chr4:76756543-76756544|-/A|frameshift_variant	28.2542754592877	0.7411748056684583	2				NaN	NaN	0	NaN	2634	2688	5321
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5325	18.296	NaN	3634.2	30	0	384.57	0.106	+			23118	KVVTEQGA	8	67	416.23174935661535	830.4489457800307	2	416.2317810058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KVVTEQGA_	YWHAQ|p.A28V|1|0.45|ENSG00000134308|chr2:9630370-9630370|G/A|missense_variant	66.42927471994793	0.4381325844043345	2				NaN	NaN	0	NaN	2635	2688	5321
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5326	18.298	NaN	717.05	30	0	94.316	0.106	+			38150	SQAGVYTGK	9	32	455.7350184350141	NaN	0	455.7346496582031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SQAGVYTGK_	ENST00000375743.8_1_1:16299537-16302484:-|nuORF	33.921630207806714	0.3063038642147651	2				NaN	NaN	0	NaN	2636	2688	5321
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5327	18.3	NaN	193.49	30	0	69.617	0.036				-1	IGCVRVRR	8	11	339.20147705078125	NaN	0	339.20147705078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_IGC(Carbamidomethyl (C))VRVRR_	nc|ENSG00000082684|Q9P283-4|SEMA5B	19.359975847455235	1.7418937515398478	2				NaN	NaN	0	NaN	2637	2688	5321
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5345	18.336	NaN	21884	30	0	3496.9	0.214				-1	 	0	92	603.9532412409803	1808.837894323141	3	603.9539184570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2652	2691	5344
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5346	18.339	NaN	3354.4	30	0	560.09	0.106	+			34565	RVLQAVAAT	9	50	464.7819357544419	927.5493185756839	2	464.7821960449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RVLQAVAAT_	ENST00000543450.1_1_11:71779123-71779267:-|nuORF	35.61828744233558	0.47037581924408073	2				NaN	NaN	0	NaN	2653	2691	5344
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5347	18.342	NaN	1656.2	30	0	767.35	0.106	+			17190	HTSQVLVDK	9	59	513.7815771661755	1025.5486013991508	2	513.7817993164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HTSQVLVDK_	CAD|p.N1541Mfs*15|1|0.33|ENSG00000084774|chr2:27237773-27237773|A/-|frameshift_variant;CAD|p.Q1172Tfs*37|1|0.41|ENSG00000084774|chr2:27234113-27234114|-/C|frameshift_variant;CAD|p.Q902Hfs*2|1|0.42|ENSG00000084774|chr2:27232507-27232508|AG/-|frameshift_variant;ENSG00000084774|ENST00000264705|CAD	50.033510581677724	0.3025703251535696	2				NaN	NaN	0	NaN	2654	2691	5344
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5348	18.343	NaN	942	30	0	195.72	0.035	+			43950	TPDSSKTEM	9	46	498.2209706619493	NaN	0	498.2202453613281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TPDSSKTEM_	ENSG00000147010|ENST00000397821|SH3KBP1;nc|ENSG00000147010|Q96B97-2|SH3KBP1;nc|ENSG00000147010|Q96B97-3|SH3KBP1;SH3KBP1|p.L574Cfs*39|3|0.28|ENSG00000147010|chrX:19542097-19542097|G/-|frameshift_variant	66.96192283764107	0.11962625698446946	2				NaN	NaN	0	NaN	2655	2691	5344
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5366	18.379	NaN	41245	30	0	19058	0.214			+	21773	KQSLTLAK	8	81	444.7790275218856	887.5435021105712	2	444.7789001464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KQSLTLAK_	REV__ENSG00000171056|ENST00000304501|SOX7;REV__nc|ENSG00000171056|Q9BT81-2|SOX7;REV__SOX7|p.L257Wfs*14|5|0.29|ENSG00000171056|chr8:10726136-10726136|G/-|frameshift_variant	138.8255168832474	0.2537552148063804	2				NaN	NaN	0	NaN	2670	2694	5365
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5367	18.383	NaN	27290	30	0	5881.2	0.106	+			34288	RTLEPLAKK	9	74	352.5567964018295	1054.6485598056886	3	352.55712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RTLEPLAKK_	ENSG00000218739|ENST00000402297|CEBPZOS;ENST00000470216.1_1_2:37426847-37428252:+|nuORF	86.88156770896713	0.07365720931774442	2				NaN	NaN	0	NaN	2671	2694	5365
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5368	18.385	NaN	8198.4	30	0	1872.1	0.106	+			34056	RSMEAHNILSK	11	53	434.559106218648	1300.6554892561442	3	434.5587463378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_RSM(Oxidation (M))EAHNILSK_	ENSG00000160075|ENST00000291386|SSU72;ENST00000378725.3_1_1:1480120-1509937:-|nuORF;nc|ENSG00000160075|Q9NP77-2|SSU72;SSU72|p.L82Ffs*8|1|0.34|ENSG00000160075|chr1:1544981-1544982|-/A|frameshift_variant	64.22387071457851	0.2857512628307259	2				NaN	NaN	0	NaN	2672	2694	5365
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5369	18.387	NaN	2133.2	30	0	636.59	0.106	+			47251	VMRDPQTK	8	45	487.75761165942237	973.5006703856448	2	487.7578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VMRDPQTK_	ENSG00000170144|ENST00000392524|HNRNPA3;ENST00000437410.2_1_1:54441353-54441674:-|nuORF;ENST00000472163.1_1_3:75263799-75264780:+|nuORF;HNRNPA3|p.K200Rfs*147|1|0.13|ENSG00000170144|chr2:177216544-177216544|A/-|frameshift_variant;HNRNPA3|p.Y267Lfs*2|1|0.62|ENSG00000170144|chr2:177216918-177216919|-/T|frameshift_variant;nc|ENSG00000170144|P51991-2|HNRNPA3	44.377184641726394	0.6291511924298419	2				NaN	NaN	0	NaN	2673	2694	5365
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5370	18.389	NaN	425.76	30	0	127.17	0.106			+	17151	HTALTKGLAG	10	31	484.7786865234375	NaN	0	484.7786865234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HTALTKGLAG_	REV__ENST00000492066.5_1_11:62594823-62598548:-|nuORF	31.529811441608018	0.39664753963064203	2				NaN	NaN	0	NaN	2674	2694	5365
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5371	18.391	NaN	754.44	30	0	46.661	0.039	+			705	AEARAGHAG	9	37	420.2113037109375	NaN	0	420.2113037109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEARAGHAG_	ENST00000457671.1_1_1:161860623-161860854:+|nuORF	31.954861631926434	0.3162336699109506	2				NaN	NaN	0	NaN	2675	2694	5365
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5389	18.426	NaN	1762.6	30	0	277.59	0.214	+			15745	GVSKPIGVSK	10	54	486.2979130363735	970.581273139547	2	486.2978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVSKPIGVSK_	ENSG00000196700|ENST00000369888|ZNF512B;ZNF512B|p.P197H|1|0.6|ENSG00000196700|chr20:63966585-63966585|G/T|missense_variant	112.2953585152457	0.0411829880542106	2				NaN	NaN	0	NaN	2690	2697	5388
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5390	18.43	NaN	4227.5	30	0	1123.9	0.106	+			22696	KVAIKVIDKK	10	41	381.2601528455841	1140.7586291369523	3	381.2607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVAIKVIDKK_	ENSG00000142149|ENST00000270112|HUNK;HUNK|p.K100Rfs*18|1|0.51|ENSG00000142149|chr21:31924501-31924501|A/-|frameshift_variant	72.2432373244024	0.2589930451692646	2				NaN	NaN	0	NaN	2691	2697	5388
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5391	18.432	NaN	2997.6	30	0	871.21	0.106	+			47548	VQYSNLPTK	9	49	525.2837746256657	NaN	0	525.2832641601562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VQYSNLPTK_	ENSG00000128268|ENST00000341184|MGAT3	45.02220120713402	0.24099765136254067	2				NaN	NaN	0	NaN	2692	2697	5388
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5392	18.434	NaN	631.45	30	0	49.286	0.106			+	19664	KDLSAELH	8	43	456.74285888671875	NaN	0	456.74285888671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KDLSAELH_	REV__ENSG00000137486|ENST00000420843|ARRB1;REV__ENSG00000141480|ENST00000269260|ARRB2;REV__ENST00000573886.5_1_17:4620541-4621453:+|nuORF;REV__nc|ENSG00000137486|P49407-2|ARRB1;REV__nc|ENSG00000141480|P32121-2|ARRB2;REV__nc|ENSG00000141480|P32121-3|ARRB2;REV__nc|ENSG00000141480|P32121-4|ARRB2;REV__nc|ENSG00000141480|P32121-5|ARRB2	40.5726180659479	1.7418937515398478	2				NaN	NaN	0	NaN	2693	2697	5388
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5393	18.435	NaN	224.19	30	0	46.511	0.035	+			3372	ASPAVGEKLK	10	13	500.2960205078125	NaN	0	500.2960205078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASPAVGEKLK_	ENSG00000104859|ENST00000221455|CLASRP;nc|ENSG00000104859|Q8N2M8-3|CLASRP;nc|ENSG00000104859|Q8N2M8-4|CLASRP	14.864876125193954	0.4201028297492154	2				NaN	NaN	0	NaN	2694	2697	5388
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5411	18.471	NaN	6639	30	0	1069	0.214			+	3462	ASRTLSNQFDQ	11	58	422.87422199140025	1265.6008365744008	3	422.8741455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASRTLSNQFDQ_	REV__ENSG00000150867|ENST00000376573|PIP4K2A;REV__ENST00000422321.5_1_10:22856588-22898637:-|nuORF;REV__nc|ENSG00000150867|P48426-2|PIP4K2A;REV__PIP4K2A|p.K261Rfs*9|1|0.06|ENSG00000150867|chr10:22550669-22550669|T/-|frameshift_variant;REV__PIP4K2A|p.R141Dfs*19|1|0.27|ENSG00000150867|chr10:22591700-22591700|T/-|frameshift_variant	27.64392233501311	0.6998289966465058	2				NaN	NaN	0	NaN	2709	2700	5410
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5412	18.474	NaN	656.63	30	0	286.73	0.035	+			51428	YTYGKPVR	8	21	492.2673034667969	NaN	0	492.2673034667969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YTYGKPVR_	CON__ENSEMBL:ENSBTAP00000037665	15.641811463095205	1.7418937515398478	2				NaN	NaN	0	NaN	2710	2700	5410
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5430	18.511	NaN	3045.9	30	0	746.41	0.214			+	21616	KPNRFNSK	8	55	495.7770918509557	989.5396307687114	2	495.77752685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KPNRFNSK_	REV__ENST00000332629.6_1_3:196294085-196295479:-|nuORF;REV__ENST00000425888.1_1_3:196294085-196295387:-|nuORF	58.78195531508484	0.5138399468736706	2				NaN	NaN	0	NaN	2725	2703	5429
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5431	18.514	NaN	1865.8	30	0	328.59	0.106	+			15979	HAIMRSPQM	9	46	543.762980766434	1085.511408599668	2	543.7642211914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_HAIMRSPQM(Oxidation (M))_	CTNNB1|p.L301Hfs*16|1|0.05|ENSG00000168036|chr3:41225827-41225831|TTCAA/-|frameshift_variant;CTNNB1|p.M271Wfs*5|1|0.08|ENSG00000168036|chr3:41225733-41225733|A/-|frameshift_variant;ENSG00000168036|ENST00000349496|CTNNB1	87.69643885390035	0.07135982304947239	2				NaN	NaN	0	NaN	2726	2703	5429
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5432	18.516	NaN	4621.2	30	0	1975.6	0.106	+			48968	VVGDGAVGK	9	42	401.2267294012405	800.438905869281	2	401.22686767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVGDGAVGK_	ENSG00000070831|ENST00000656825|CDC42;ENSG00000119729|ENST00000238738|RHOQ;ENSG00000126785|ENST00000316754|RHOJ;ENSG00000128340|ENST00000249071|RAC2;ENSG00000136238|ENST00000348035|RAC1;ENSG00000169750|ENST00000306897|RAC3;ENSG00000177105|ENST00000351018|RHOG;ENST00000469532.1_1_22:37628528-37640188:-|nuORF;nc|ENSG00000126785|Q9H4E5-2|RHOJ;nc|ENSG00000136238|P63000-2|RAC1;nc|ENSG00000289694|P60953-1|CDC42;RAC1|p.S83Pfs*3|1|0.19|ENSG00000136238|chr7:6400144-6400144|T/-|frameshift_variant;RHOQ|p.F175Lfs*6|1|0.05|ENSG00000119729|chr2:46580986-46580986|T/-|frameshift_variant;RHOQ|p.R193Efs*2|1|0.25|ENSG00000119729|chr2:46581035-46581035|A/-|frameshift_variant	68.78682469695295	0.14603441672067394	2				NaN	NaN	0	NaN	2727	2703	5429
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5433	18.518	NaN	1175.9	30	0	546.39	0.106	+			44	AAAPAGRAM	9	26	408.2137145996094	NaN	0	408.2137145996094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AAAPAGRAM_	ENSG00000115525|ENST00000638572|ST3GAL5;ENST00000484728.6_2_2:86088279-86116028:-|nuORF	26.79610172149135	0.34227917631780574	2				NaN	NaN	0	NaN	2728	2703	5429
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5434	18.52	NaN	4674.9	30	0	756.91	0.04	+			33098	RELDRERQKL	10	52	448.2562559420492	1341.7469384263477	3	448.2560729980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RELDRERQKL_	ENSG00000130724|ENST00000312547|CHMP2A;ENST00000597209.1_1_19:59063514-59065579:-|nuORF;ENST00000600804.1_1_19:59065240-59065579:-|nuORF	48.601550744091256	0.46988609897316763	2				NaN	NaN	0	NaN	2729	2703	5429
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5452	18.558	NaN	21317	30	0	9028.2	0.214	+			39361	STCQRFVEK	9	64	385.52546079331944	1153.5545529801584	3	385.5257568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_STC(Carbamidomethyl (C))QRFVEK_	ENSG00000181610|ENST00000313608|MRPS23	62.107414245175825	0.1960472003779324	2				NaN	NaN	0	NaN	2744	2706	5451
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5453	18.561	NaN	4033.8	30	0	1178.6	0.035	+			34529	RVIAKALEK	9	61	514.3354121420409	NaN	0	514.3353271484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RVIAKALEK_	ENSG00000100401|ENST00000356244|RANGAP1	65.46538089061403	0.1260090208616529	2				NaN	NaN	0	NaN	2745	2706	5451
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5471	18.598	NaN	2650.7	30	0	236.59	0.214	+			1368	AEVHANRL	8	50	455.2490539550781	NaN	0	455.2490539550781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEVHANRL_	ENSG00000147642|ENST00000276646|SYBU;nc|ENSG00000147642|Q9NX95-2|SYBU;nc|ENSG00000147642|Q9NX95-3|SYBU;nc|ENSG00000147642|Q9NX95-4|SYBU;nc|ENSG00000147642|Q9NX95-5|SYBU	31.954861631926434	1.7418937515398478	2				NaN	NaN	0	NaN	2760	2709	5470
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5472	18.602	NaN	1846.6	30	0	184.11	0.035			+	15618	GVKPAIRVR	9	53	498.3285827636719	NaN	0	498.3285827636719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GVKPAIRVR_	REV__ENST00000366362.3_1_12:2973410-2973858:-|nuORF	38.80614096846853	0.28164298475537564	2				NaN	NaN	0	NaN	2761	2709	5470
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5490	18.639	NaN	6917.4	30	0	3078.9	0.214	+			29121	NTTSAVTVK	9	54	460.7563493110167	919.4981456888335	2	460.75640869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NTTSAVTVK_	ENSG00000197756|ENST00000491306|RPL37A;ENST00000420712.1_1_2:217364102-217366124:+|nuORF;ENST00000496450.1_1_11:27505577-27505652:+|nuORF	101.45984612302182	0.0377122763612125	2				NaN	NaN	0	NaN	2776	2712	5489
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5491	18.642	NaN	688.57	30	0	327.43	0.106			+	7103	CYFNLHDK	8	25	520.2356567382812	NaN	0	520.2356567382812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_CYFNLHDK_	REV__ENSG00000132359|ENST00000254695|RAP1GAP2;REV__nc|ENSG00000132359|Q684P5-2|RAP1GAP2;REV__nc|ENSG00000132359|Q684P5-3|RAP1GAP2;REV__RAP1GAP2|p.F493Sfs*60|2|0.24|ENSG00000132359|chr17:3008122-3008122|G/-|frameshift_variant	35.200714571348534	1.7418937515398478	2				NaN	NaN	0	NaN	2777	2712	5489
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5492	18.644	NaN	216.86	30	0	24.281	0.045			+	-1	SCRWFRVC	8	20	557.2559204101562	NaN	0	557.2559204101562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SC(Carbamidomethyl (C))RWFRVC_	REV__ENSG00000100462|ENST00000324366|PRMT5;REV__nc|ENSG00000100462|O14744-2|PRMT5;REV__nc|ENSG00000100462|O14744-3|PRMT5;REV__nc|ENSG00000100462|O14744-4|PRMT5;REV__nc|ENSG00000100462|O14744-5|PRMT5	13.775330524044264	1.7418937515398478	2				NaN	NaN	0	NaN	2778	2712	5489
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5510	18.681	NaN	20041	30	0	4319.4	0.215	+			49597	VYGKTSHL	8	68	452.747768725233	903.480984517266	2	452.7481384277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYGKTSHL_	ENSG00000105866|ENST00000222584|SP4;ENSG00000164651|ENST00000418710|SP8;ENSG00000172845|ENST00000310015|SP3;ENSG00000185591|ENST00000327443|SP1;ENSG00000204335|ENST00000375281|SP5;ENSG00000217236|ENST00000394967|SP9;ENST00000465379.1_1_2:174774671-174778005:-|nuORF;nc|ENSG00000164651|Q8IXZ3-1|SP8;nc|ENSG00000164651|Q8IXZ3-2|SP8;nc|ENSG00000164651|Q8IXZ3|SP8;nc|ENSG00000172845|Q02447-2|SP3;nc|ENSG00000172845|Q02447-3|SP3;nc|ENSG00000172845|Q02447-4|SP3;nc|ENSG00000172845|Q02447-5|SP3;nc|ENSG00000172845|Q02447-6|SP3;nc|ENSG00000185591|P08047-2|SP1;nc|ENSG00000185591|P08047-3|SP1;SP3|p.G708Vfs*20|1|0.27|ENSG00000172845|chr2:173910166-173910166|T/-|frameshift_variant;SP8|p.E482Sfs*8|1|0.36|ENSG00000164651|chr7:20784320-20784320|G/-|frameshift_variant	82.24051045832904	0.30490469762271794	2				NaN	NaN	0	NaN	2793	2715	5509
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5511	18.684	NaN	1286	30	0	212.68	0.034			+	23159	KVYLIPIT	8	45	473.8006896972656	NaN	0	473.8006896972656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVYLIPIT_	REV__ENSG00000105723|ENST00000222330|GSK3A;REV__GSK3A|p.G337Efs*11|1|0.5|ENSG00000105723|chr19:42233198-42233198|C/-|frameshift_variant;REV__GSK3A|p.Q238Gfs*17|1|0.25|ENSG00000105723|chr19:42234633-42234634|GG/-|frameshift_variant	25.450171626174864	1.7418937515398478	2				NaN	NaN	0	NaN	2794	2715	5509
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5529	18.722	NaN	3139.7	30	0	611.71	0.142	+			15919	HADASSKVL	9	54	464.24814065739156	926.4817283815831	2	464.2480163574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HADASSKVL_	ENSG00000166169|ENST00000370162|POLL;ENST00000339310.7_1_10:103343400-103347291:-|nuORF	85.16082228582465	0.07850854922700509	2				NaN	NaN	0	NaN	2809	2718	5528
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5547	18.761	NaN	1924.2	30	0	414.96	0.146	+			35183	SAINDKSIVKK	11	43	401.5750427246094	NaN	0	401.5750427246094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAINDKSIVKK_	ENSG00000131351|ENST00000253669|HAUS8;nc|ENSG00000131351|Q9BT25-2|HAUS8;nc|ENSG00000131351|Q9BT25-3|HAUS8	22.561587123415745	0.456735970842152	2				NaN	NaN	0	NaN	2824	2721	5546
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5565	18.8	NaN	42018	30	0	8017.8	0.214				-1	 	0	81	472.7792732631536	943.5439935931072	2	472.7795715332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2839	2724	5564
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5566	18.803	NaN	2329.2	30	0	1338.7	0.106	+			3422	ASQKTSAI	8	29	403.2242187060328	NaN	0	403.2240905761719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASQKTSAI_	ENST00000486875.1_1_20:5107738-5156066:+|nuORF	33.51558372728122	1.7418937515398478	2				NaN	NaN	0	NaN	2840	2724	5564
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5567	18.805	NaN	1451.8	30	0	156.33	0.041	+			7566	DIFQASSR	8	40	462.23236083984375	NaN	0	462.23236083984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DIFQASSR_	ENST00000480488.2_1_20:18393725-18393827:-|nuORF	27.882242232435846	1.7418937515398478	2				NaN	NaN	0	NaN	2841	2724	5564
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5585	18.842	NaN	9921.1	30	0	1652.5	0.214			+	1781	AIDKHAVLN	9	59	490.77939594694107	979.5442389606822	2	490.7796325683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AIDKHAVLN_	REV__ENSG00000104497|ENST00000345957|SNX16;REV__nc|ENSG00000104497|P57768-2|SNX16	71.29570347882199	0.13518600952103718	2				NaN	NaN	0	NaN	2856	2727	5584
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5586	18.845	NaN	8826.6	30	0	3290.4	0.106	+			35800	SEAKPAAVAA	10	57	457.7504646269808	913.4863763207616	2	457.7506103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEAKPAAVAA_	ENSG00000137076|ENST00000314888|TLN1;ENST00000486788.2_1_9:35704327-35706084:-|nuORF;nc|ENSG00000137076|Q9Y490-2|TLN1	77.31757898189308	0.2175361111083648	2				NaN	NaN	0	NaN	2857	2727	5584
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5587	18.847	NaN	6997.5	30	0	650.86	0.106	+			25160	LLTRLLKRD	9	63	376.57974853661386	1126.7174162100416	3	376.580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LLTRLLKRD_	ENSG00000136881|ENST00000259407|BAAT	38.753607047826485	0.4348790777924195	2				NaN	NaN	0	NaN	2858	2727	5584
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5588	18.849	NaN	16447	30	0	4627.3	0.034				-1	 	0	62	478.23971712915153	954.4648813251031	2	478.2400207519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2859	2727	5584
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5592	18.862	NaN	4446.7	30	0	782.33	0.214	+			41741	SVSKDVVVSK	10	57	524.305128378805	1046.5957038244098	2	524.3059692382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSKDVVVSK_	E4F1|p.E388Gfs*55|1|0.48|ENSG00000167967|chr16:2233539-2233540|-/G|frameshift_variant;E4F1|p.E717Rfs*3|1|0.25|ENSG00000167967|chr16:2235361-2235361|C/-|frameshift_variant;ENSG00000167967|ENST00000301727|E4F1;ENST00000569796.1_1_16:2282158-2283271:+|nuORF	164.6633220568051	0.005382245416859776	2				NaN	NaN	0	NaN	2860	2730	5591
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5593	18.866	NaN	2182.9	30	0	1032.5	0.106	+			51455	YVGAAKLK	8	46	425.26304804014575	NaN	0	425.26300048828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YVGAAKLK_	ENSG00000100938|ENST00000399440|GMPR2;ENSG00000137198|ENST00000259727|GMPR;ENST00000543191.5_1_6:16258277-16295414:+|nuORF;ENST00000544145.1_1_6:16289789-16295414:+|nuORF;nc|ENSG00000100938|Q9P2T1-2|GMPR2;nc|ENSG00000100938|Q9P2T1-3|GMPR2	52.29916861842294	1.7418937515398478	2				NaN	NaN	0	NaN	2861	2730	5591
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5594	18.868	NaN	1018.7	30	0	178.44	0.033	+			41814	SVSSPTVGK	9	37	431.23743182456235	860.4603107159247	2	431.2374572753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVSSPTVGK_	ENSG00000123411|ENST00000547167|IKZF4;ENST00000551124.5_1_12:56418779-56429112:+|nuORF;nc|ENSG00000123411|Q9H2S9-2|IKZF4	40.77816245573522	0.41113185337114944	2				NaN	NaN	0	NaN	2862	2730	5591
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5607	18.893	NaN	3524.7	30	0	2120.7	0.214			+	44319	TSFDLQVQ	8	59	469.2344530602498	936.4543531872996	2	469.2344970703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSFDLQVQ_	REV__ENSG00000145362|ENST00000357077|ANK2	55.50420428727701	0.5462892107279674	2				NaN	NaN	0	NaN	2872	2733	5606
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5608	18.897	NaN	2304.6	30	0	705.94	0.106	+			5738	AVFVTPSCP	9	55	460.73262269750126	919.4506924618025	2	460.7330627441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVFVTPSCP_	ENST00000284292.10_1_11:124616312-124616468:+|nuORF	31.954861631926434	0.5046124803899898	2				NaN	NaN	0	NaN	2873	2733	5606
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5609	18.899	NaN	1078.8	30	0	123.53	0.033	+			48042	VSSALGVQH	9	47	449.24275812706253	896.4709633209251	2	449.242919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSSALGVQH_	PPRC1|p.G704Vfs*30|1|0.2|ENSG00000148840|chr10:102140614-102140614|G/-|frameshift_variant	45.9519527083369	0.35044536499095585	2				NaN	NaN	0	NaN	2874	2733	5606
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5620	18.922	NaN	3021.6	30	0	1574.5	0.214	+			31182	QGNESIVAK	9	44	473.2532174545815	944.491881975963	2	473.25347900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QGNESIVAK_	ENSG00000161800|ENST00000312377|RACGAP1;ENST00000548158.1_1_12:50393384-50398020:-|nuORF	41.42661286455405	0.403525789677298	2				NaN	NaN	0	NaN	2882	2736	5619
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5621	18.926	NaN	1088.3	30	0	342.08	0.035			+	25780	LSALTMHMF	9	25	525.7581107280278	1049.5016685228554	2	525.7577514648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSALTMHMF_	REV__ENSG00000006534|ENST00000342456|ALDH3B1;REV__nc|ENSG00000006534|P43353-2|ALDH3B1	24.20275056022122	0.577060078256802	2				NaN	NaN	0	NaN	2883	2736	5619
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5639	18.963	NaN	6278.6	30	0	713.28	0.214			+	7505	DGLAEAKR	8	51	430.23540527691085	858.4562576206217	2	430.2351379394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DGLAEAKR_	REV__CCDC88B|p.E747G|1|0.28|ENSG00000168071|chr11:64344781-64344781|A/G|missense_variant;REV__ENSG00000168071|ENST00000356786|CCDC88B;REV__ENST00000463837.5_1_11:64107738-64120281:+|nuORF;REV__ENST00000492980.1_1_11:64111011-64117377:+|nuORF;REV__ENST00000494080.5_1_11:64109984-64120281:+|nuORF;REV__ENST00000494566.5_1_11:64110218-64117194:+|nuORF;REV__nc|ENSG00000168071|A6NC98-2|CCDC88B;REV__nc|ENSG00000168071|A6NC98-3|CCDC88B;REV__nc|ENSG00000168071|A6NC98-4|CCDC88B	90.77665401227738	0.27511901818546464	2				NaN	NaN	0	NaN	2898	2739	5638
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5640	18.967	NaN	2188.6	30	0	598.07	0.036			+	32692	RAGLPPELVK	10	52	540.331865659589	1078.6491783859778	2	540.3325805664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RAGLPPELVK_	REV__ENSG00000117400|ENST00000372470|MPL;REV__nc|ENSG00000117400|P40238-2|MPL	63.42647028704847	0.33467688528802414	2				NaN	NaN	0	NaN	2899	2739	5638
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5658	19.003	NaN	7706.5	30	0	1332.5	0.143	+			22958	KVQTAVTMK	9	63	503.2917434526103	1004.5689339720207	2	503.2921142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVQTAVTMK_	ENSG00000131165|ENST00000397901|CHMP1A;ENST00000550872.1_1_16:89715668-89724092:-|nuORF	155.5846463517096	0.005567437401040498	2				NaN	NaN	0	NaN	2914	2742	5657
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5676	19.041	NaN	1929.5	30	0	678.29	0.214			+	47776	VSHLARLE	8	48	462.7668151855469	NaN	0	462.7668151855469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSHLARLE_	REV__ENSG00000095261|ENST00000210313|PSMD5;REV__ENST00000471789.1_1_9:123594085-123605145:-|nuORF;REV__nc|ENSG00000095261|Q16401-2|PSMD5;REV__PSMD5|p.G278Wfs*8|2|0.31|ENSG00000095261|chr9:120824668-120824669|-/A|frameshift_variant	63.30626980617807	1.7418937515398478	2				NaN	NaN	0	NaN	2929	2745	5675
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5677	19.044	NaN	4794.2	30	0	1559.6	0.034	+			16436	HESGHAIIA	9	49	467.74026336652815	933.4659737998563	2	467.7407531738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HESGHAIIA_	ENSG00000136758|ENST00000376016|YME1L1;nc|ENSG00000136758|Q96TA2-3|YME1L1;nc|ENSG00000136758|Q96TA2|YME1L1	45.9519527083369	0.35044536499095585	2				NaN	NaN	0	NaN	2930	2745	5675
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5695	19.082	NaN	16691	30	0	5431.3	0.141			+	43531	TGVAAQLK	8	52	394.23679630250354	786.4590396718071	2	394.2375793457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TGVAAQLK_	REV__ENSG00000142347|ENST00000644032|MYO1F;REV__ENST00000601502.1_1_19:8608994-8610536:-|nuORF;REV__MYO1F|p.L967Cfs*94|1|0.31|ENSG00000142347|chr19:8522785-8522785|G/-|frameshift_variant	79.45101966838831	0.3281480470254892	2				NaN	NaN	0	NaN	2945	2748	5694
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5713	19.12	NaN	29969	30	0	7847.3	0.214				-1	 	0	55	426.214866388732	1275.622769766396	3	426.2149963378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2960	2751	5712
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5714	19.124	NaN	24704	30	0	8214.8	0.106			+	26634	LVCCATNVL	9	73	468.2374184318791	934.4602839305583	2	468.2382507324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LVCCATNVL_	REV__ENSG00000159461|ENST00000290649|AMFR;REV__ENST00000568657.1_1_16:56442078-56458825:-|nuORF	76.7741389293348	0.11149722112137898	2				NaN	NaN	0	NaN	2961	2751	5712
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5715	19.126	NaN	318.19	30	0	52.763	0.106			+	33890	RRQLLVTPGN	10	19	385.2317810058594	NaN	0	385.2317810058594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RRQLLVTPGN_	REV__ENST00000377625.6_1_13:75900405-75901937:-|nuORF	10.586796910825942	0.4201028297492154	2				NaN	NaN	0	NaN	2962	2751	5712
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5716	19.128	NaN	523.22	30	0	129.02	0.034	+			25895	LSGEPGVRR	9	20	485.77473296360904	NaN	0	485.77484130859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSGEPGVRR_	ENST00000430857.5_1_7:100136843-100136927:+|nuORF	19.1035232394073	0.3723251548669699	2				NaN	NaN	0	NaN	2963	2751	5712
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5734	19.165	NaN	20871	30	0	3330.9	0.214				-1	 	0	74	451.7867174930646	901.5588820529292	2	451.786865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2978	2754	5733
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5735	19.168	NaN	10324	30	0	2179.3	0.106				-1	 	0	45	393.22910557532737	784.4436582174548	2	393.2292175292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2979	2754	5733
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5736	19.17	NaN	6762.5	30	0	2694.6	0.106	+			40549	SVAASVTAK	9	48	417.2392478781122	NaN	0	417.2397766113281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVAASVTAK_	ENSG00000166716|ENST00000560079|ZNF592	41.42661286455405	0.26577678759562784	2				NaN	NaN	0	NaN	2980	2754	5733
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5737	19.172	NaN	2250	30	0	270.04	0.045				-1	 	0	48	569.611507320666	NaN	0	569.6115112304688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2981	2754	5733
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5756	19.208	NaN	79520	30	0	26213	0.204	+			15586	GVHGGLINK	9	76	447.7611152766639	893.5076776201278	2	447.7611389160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVHGGLINK_	ENSG00000108518|ENST00000225655|PFN1	133.4690685054315	0.013543987435668854	2				NaN	NaN	0	NaN	2997	2757	5755
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5757	19.212	NaN	23369	30	0	8364.3	0.106			+	19974	KEGVTVTK	8	68	431.2554352130088	860.4963174928176	2	431.2554016113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEGVTVTK_	REV__ENSG00000066933|ENST00000356056|MYO9A;REV__ENST00000563542.5_1_15:72185266-72338904:-|nuORF;REV__MYO9A|p.L1961*|2|0.14|ENSG00000066933|chr15:71878089-71878089|A/-|frameshift_variant;REV__MYO9A|p.Y1422Ifs*8|1|0.18|ENSG00000066933|chr15:71898239-71898239|A/-|frameshift_variant;REV__nc|ENSG00000066933|B2RTY4-2|MYO9A;REV__nc|ENSG00000066933|B2RTY4-3|MYO9A;REV__nc|ENSG00000066933|B2RTY4-4|MYO9A;REV__nc|ENSG00000066933|B2RTY4-5|MYO9A	101.25262130126117	0.2499877059228457	2				NaN	NaN	0	NaN	2998	2757	5755
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5758	19.214	NaN	2421.8	30	0	728.96	0.106	+			22601	KTTHPLIQH	9	57	537.8058686230881	1073.5971843129762	2	537.806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KTTHPLIQH_	ENSG00000186638|ENST00000402558|KIF24;KIF24|p.G740Rfs*43|1|0.1|ENSG00000186638|chr9:34257390-34257391|-/TT|frameshift_variant;KIF24|p.K661Sfs*34|1|0.74|ENSG00000186638|chr9:34257625-34257625|T/-|frameshift_variant;KIF24|p.P662Afs*10|1|0.31|ENSG00000186638|chr9:34257624-34257625|-/T|frameshift_variant;nc|ENSG00000186638|Q5T7B8-4|KIF24	61.691277971877994	0.19951612995419254	2				NaN	NaN	0	NaN	2999	2757	5755
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5759	19.216	NaN	12697	30	0	5322.7	0.106				-1	VGARGCRRA	9	43	334.8510343034194	1001.5312735104583	3	334.851318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_VGARGC(Carbamidomethyl (C))RRA_	ENST00000478619.1_1_3:50374315-50374750:-|nuORF	25.57405402267927	0.5642445186134241	2				NaN	NaN	0	NaN	3000	2757	5755
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5760	19.218	NaN	2164.1	30	0	988.74	0.106	+			32534	QVSALQGL	8	37	408.23425266535753	814.4539523975151	2	408.234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QVSALQGL_	ENST00000475818.5_1_3:13522761-13543460:+|nuORF	44.116797842482775	0.6307669463330267	2				NaN	NaN	0	NaN	3001	2757	5755
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5761	19.219	NaN	1646	30	0	448.22	0.106				-1	 	0	35	427.73986218442326	853.4651714356465	2	427.7402038574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3002	2757	5755
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5762	19.221	NaN	715.23	30	0	223.38	0.031				-1	 	0	26	378.7340101819175	755.453467430635	2	378.7342529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3003	2757	5755
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5780	19.257	NaN	2200.1	30	0	406.62	0.214	+			44485	TSSAVTSVAK	10	41	475.76198382946643	NaN	0	475.7612609863281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSSAVTSVAK_	ENSG00000165949|ENST00000612813|IFI27;nc|ENSG00000165949|P40305-1|IFI27	96.0336014099291	0.031046810967366768	2				NaN	NaN	0	NaN	3018	2760	5779
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5781	19.261	NaN	1477.9	30	0	462.6	0.106			+	39146	SSVNAYAK	8	39	420.21619626262077	838.4178395920416	2	420.2162780761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSVNAYAK_	REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-10|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-13|TTN;REV__nc|ENSG00000155657|Q8WZ42-2|TTN;REV__nc|ENSG00000155657|Q8WZ42-3|TTN;REV__nc|ENSG00000155657|Q8WZ42-4|TTN;REV__nc|ENSG00000155657|Q8WZ42-5|TTN;REV__nc|ENSG00000155657|Q8WZ42-7|TTN;REV__nc|ENSG00000155657|Q8WZ42-8|TTN;REV__nc|ENSG00000155657|Q8WZ42-9|TTN;REV__nc|ENSG00000155657|Q8WZ42|TTN;REV__TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;REV__TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;REV__TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;REV__TTN|p.K26626Nfs*34|1|0.34|ENSG00000155657|chr2:178561331-178561331|T/-|frameshift_variant;REV__TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;REV__TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;REV__TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant;REV__TTN|p.V27442Cfs*4|1|0.05|ENSG00000155657|chr2:178558107-178558108|-/A|frameshift_variant	29.14955571784316	0.7342621283720113	2				NaN	NaN	0	NaN	3019	2760	5779
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5782	19.263	NaN	11017	30	0	1981.3	0.106	+			48488	VTMKQICKK	9	63	360.20816283126976	1077.6026590940094	3	360.2085266113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTMKQICKK_	DEK|p.E372Sfs*2|1|0.2|ENSG00000124795|chr6:18226177-18226177|T/-|frameshift_variant;ENSG00000124795|ENST00000652689|DEK;nc|ENSG00000124795|P35659-2|DEK	61.691277971877994	0.19951612995419254	2				NaN	NaN	0	NaN	3020	2760	5779
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5783	19.265	NaN	4411	30	0	1061.7	0.106	+			16592	HGFREGTTP	9	51	501.24305896484685	1000.4715649964937	2	501.24346923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HGFREGTTP_	ENSG00000145592|ENST00000274242|RPL37;ENST00000504562.1_1_5:40832608-40835123:-|nuORF	84.9155231211612	0.07920012719736333	2				NaN	NaN	0	NaN	3021	2760	5779
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5784	19.267	NaN	657.63	30	0	52.524	0.034	+			1725	AHEPPRPE	8	39	466.732666015625	NaN	0	466.732666015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AHEPPRPE_	ENSG00000261221|ENST00000568956|ZNF865	24.20275056022122	1.7418937515398478	2				NaN	NaN	0	NaN	3022	2760	5779
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5802	19.304	NaN	13013	30	0	3225.3	0.214	+			22509	KTQAISISK	9	69	488.2948919757619	974.5752310183238	2	488.295166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTQAISISK_	ENSG00000130787|ENST00000253083|HIP1R;ENST00000452196.6_1_12:123320097-123341792:+|nuORF;HIP1R|p.A781Pfs*24|1|0.19|ENSG00000130787|chr12:122859467-122859467|G/-|frameshift_variant;HIP1R|p.E1021Vfs*2|1|0.32|ENSG00000130787|chr12:122861412-122861445|AGAGGAGGTGGCCATCCGGCCCAGCACTGCCCCC/-|frameshift_variant;HIP1R|p.N345Mfs*4|3|0.29|ENSG00000130787|chr12:122855584-122855584|C/-|frameshift_variant;nc|ENSG00000130787|O75146-2|HIP1R	145.46060221211434	0.007927189773590037	2				NaN	NaN	0	NaN	3037	2763	5801
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5803	19.308	NaN	1233.6	30	0	173.04	0.106	+			1674	AGSICRTP	8	46	402.70477193924387	803.3949909452878	2	402.70562744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AGSICRTP_	PKDCC|p.V378Wfs*112|1|0.21|ENSG00000162878|chr2:42055298-42055298|G/-|frameshift_variant	76.84663266511073	0.3498490246073164	2				NaN	NaN	0	NaN	3038	2763	5801
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5804	19.31	NaN	1707.6	30	0	374.17	0.106	+			44541	TTAAPSPPR	9	41	449.24275812706253	896.4709633209251	2	449.2430419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TTAAPSPPR_	ENSG00000177283|ENST00000374694|FZD8	82.24051045832904	0.08786059719216216	2				NaN	NaN	0	NaN	3039	2763	5801
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5805	19.312	NaN	1103.3	30	0	298.49	0.032				-1	VTLKNGRVAML	11	34	406.5721332845702	1216.6945704539107	3	406.23712158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_VTLKNGRVAM(Oxidation (M))L_	ATRN|p.V460A|1|0.05|ENSG00000088812|chr20:3560837-3560837|T/C|missense_variant	17.833141474888023	0.7869876583333034	2				NaN	NaN	0	NaN	3040	2763	5801
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5823	19.349	NaN	14548	30	0	5866.4	0.214	+			17422	IASSSIAAK	9	54	424.24751212277494	846.4804713123499	2	424.2477111816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IASSSIAAK_	ENSG00000165949|ENST00000612813|IFI27;nc|ENSG00000165949|P40305-1|IFI27;nc|ENSG00000165949|P40305-3|IFI27;nc|ENSG00000165949|P40305-4|IFI27	87.69643885390035	0.07135982304947239	2				NaN	NaN	0	NaN	3055	2766	5822
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5824	19.353	NaN	4182.7	30	0	1826.3	0.106	+			18865	IVGDPSTAK	9	38	444.2450336104784	886.4755142877568	2	444.2450256347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IVGDPSTAK_	ENSG00000076003|ENST00000264156|MCM6;ENST00000492091.1_1_2:136609063-136622601:-|nuORF;MCM6|p.R771Efs*3|1|0.33|ENSG00000076003|chr2:135844583-135844583|T/-|frameshift_variant	39.252832667884924	0.4290233611298554	2				NaN	NaN	0	NaN	3056	2766	5822
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5825	19.355	NaN	6186	30	0	447.57	0.106				-1	YRRWLCCPVWW	11	92	561.2672214071735	1680.7798348217202	3	561.26806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_YRRWLC(Carbamidomethyl (C))C(Carbamidomethyl (C))PVWW_	ENST00000492555.5_1_3:52562203-52563345:-|nuORF	3.61906645146314	0.8634109586117306	2				NaN	NaN	0	NaN	3057	2766	5822
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5826	19.357	NaN	1237.1	30	0	411.99	0.106	+			48656	VTSSETVVK	9	37	475.2633986785014	NaN	0	475.26336669921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTSSETVVK_	ENSG00000128833|ENST00000261839|MYO5C;ENST00000558902.5_1_15:52548900-52571163:-|nuORF;ENST00000560809.5_1_15:52548900-52557395:-|nuORF;MYO5C|p.E1050Sfs*8|1|0.32|ENSG00000128833|chr15:52229192-52229192|C/-|frameshift_variant;MYO5C|p.I480Nfs*10|1|0.5|ENSG00000128833|chr15:52253414-52253415|-/T|frameshift_variant;MYO5C|p.L1151Wfs*19|1|0.17|ENSG00000128833|chr15:52223719-52223719|A/-|frameshift_variant;MYO5C|p.L933Hfs*33|1|0.04|ENSG00000128833|chr15:52237552-52237553|-/T|frameshift_variant;MYO5C|p.L933Sfs*35|1|0.04|ENSG00000128833|chr15:52237553-52237554|-/AAGTGGA|frameshift_variant;nc|ENSG00000128833|Q9NQX4-2|MYO5C	64.20726635412375	0.13137488984569443	2				NaN	NaN	0	NaN	3058	2766	5822
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5827	19.359	NaN	5626.3	30	0	1346.5	0.106	+			19437	KAQSLAITK	9	61	480.29737084183137	958.5801887504628	2	480.2978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KAQSLAITK_	ENSG00000046651|ENST00000340096|OFD1;ENST00000490265.5_1_X:13771424-13787224:+|nuORF;nc|ENSG00000046651|O75665-3|OFD1	169.6522961985778	0.0028262690464207238	2				NaN	NaN	0	NaN	3059	2766	5822
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5828	19.36	NaN	2248.9	30	0	785.02	0.039	+			45237	TVQAVKST	8	47	417.2392478781122	NaN	0	417.23748779296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TVQAVKST_	nc|ENSG00000189308|Q6MZP7-2|LIN54	35.61828744233558	1.7418937515398478	2				NaN	NaN	0	NaN	3060	2766	5822
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5829	19.361	NaN	2909.1	30	0	875.64	0.138				-1	 	0	45	452.2387958323404	902.4630387314808	2	452.23944091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3061	2766	5822
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5847	19.399	NaN	8142.8	30	0	1848.7	0.214				-1	MRRRTCCWRCW	11	62	576.5911281420192	NaN	0	576.5912475585938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	3 Carbamidomethyl (C)	_MRRRTC(Carbamidomethyl (C))C(Carbamidomethyl (C))WRC(Carbamidomethyl (C))W_	ENST00000375224.1_1_1:19430583-19430625:-|nuORF	1.4187509189679102	0.456735970842152	2				NaN	NaN	0	NaN	3076	2769	5846
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5848	19.402	NaN	2131.6	30	0	505.45	0.106	+			1732	AHLGTALK	8	46	405.74514119010917	NaN	0	405.7451477050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AHLGTALK_	ENSG00000186468|ENST00000296674|RPS23;RPS23|p.N39T|1|0.25|ENSG00000186468|chr5:82277741-82277741|T/G|missense_variant	57.81127852772723	1.7418937515398478	2				NaN	NaN	0	NaN	3077	2769	5846
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5849	19.404	NaN	455.13	30	0	52.935	0.034	+			35294	SAMDSTVAK	9	21	455.2210388183594	NaN	0	455.2210388183594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAMDSTVAK_	BOD1L1|p.P2199Qfs*25|1|0.12|ENSG00000038219|chr4:13600304-13600304|G/-|frameshift_variant;ENSG00000038219|ENST00000040738|BOD1L1	19.1035232394073	0.3723251548669699	2				NaN	NaN	0	NaN	3078	2769	5846
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5867	19.44	NaN	5749.1	30	0	558.17	0.142	+			44849	TTTKRTGIP	9	58	487.78479590609254	973.5550388789851	2	487.7847900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTTKRTGIP_	ENSG00000128487|ENST00000395527|SPECC1;nc|ENSG00000128487|Q5M775-2|SPECC1;nc|ENSG00000128487|Q5M775-3|SPECC1;nc|ENSG00000128487|Q5M775-4|SPECC1;nc|ENSG00000128487|Q5M775-5|SPECC1;SPECC1|p.N303Hfs*14|1|0.23|ENSG00000128487|chr17:20204950-20204951|AA/-|frameshift_variant;SPECC1|p.N303Tfs*63|7|0.29|ENSG00000128487|chr17:20204950-20204950|A/-|frameshift_variant;SPECC1|p.S120Gfs*29|1|0.36|ENSG00000128487|chr17:20204397-20204398|-/AG|frameshift_variant	96.19043198914106	0.047412499214244314	2				NaN	NaN	0	NaN	3093	2772	5866
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5885	19.48	NaN	1669.5	30	0	346.8	0.155				-1	 	0	49	627.631677387639	1879.8732027631168	3	627.6336059570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3108	2775	5884
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5903	19.518	NaN	15838	30	0	2643.2	0.214	+			22537	KTRICWKY	8	73	549.3003890628075	1096.586225192415	2	549.3013305664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTRICWKY_	ENST00000263238.6_1_2:114647705-114674470:+|nuORF;ENST00000415792.5_1_2:114647705-114688890:+|nuORF;ENST00000446821.5_1_2:114647705-114684940:+|nuORF;ENST00000535589.3_1_2:114648352-114674470:+|nuORF	47.91560031466742	0.6071945918984287	2				NaN	NaN	0	NaN	3123	2778	5902
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5904	19.521	NaN	814.75	30	0	156.83	0.106				-1	 	0	28	393.22910557532737	784.4436582174548	2	393.22930908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3124	2778	5902
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5905	19.523	NaN	1645.1	30	0	510.59	0.106	+			49163	VVMRDPASK	9	41	501.7731187878743	1001.5316846425486	2	501.7733154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVMRDPASK_	ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1	54.722347961057174	0.257609425301511	2				NaN	NaN	0	NaN	3125	2778	5902
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5906	19.525	NaN	1046.2	30	0	170.96	0.106	+			36304	SESAKIKAM	9	44	482.76001150601564	NaN	0	482.7598571777344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SESAKIKAM_	ENSG00000164190|ENST00000282516|NIPBL;nc|ENSG00000164190|Q6KC79-2|NIPBL;NIPBL|p.F1423Lfs*15|1|0.43|ENSG00000164190|chr5:37008032-37008032|T/-|frameshift_variant;NIPBL|p.I2776Lfs*3|1|0.17|ENSG00000164190|chr5:37064797-37064797|A/-|frameshift_variant;NIPBL|p.L2220Ffs*3|1|0.21|ENSG00000164190|chr5:37048567-37048568|-/T|frameshift_variant	101.60071028292904	0.0182107634719595	2				NaN	NaN	0	NaN	3126	2778	5902
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5907	19.527	NaN	3330.5	30	0	714.55	0.034			+	46776	VGWGNEQAL	9	65	487.2415715507281	972.4685901682562	2	487.2415466308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VGWGNEQAL_	REV__ENSG00000111674|ENST00000229277|ENO2;REV__nc|ENSG00000111674|P09104-2|ENO2	60.97194046774394	0.20551255781574032	2				NaN	NaN	0	NaN	3127	2778	5902
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5925	19.564	NaN	94300	30	0	38083	0.188				-1	 	0	63	334.8510343034194	1001.5312735104583	3	334.8514709472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3142	2781	5924
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5926	19.567	NaN	134030	30	0	21784	0.106			+	-1	NKCLWRDWWFC	11	92	557.5826657430358	1669.7261678293073	3	557.5841064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_NKC(Carbamidomethyl (C))LWRDWWFC(Carbamidomethyl (C))_	REV__ENST00000491103.5_1_6:10748006-10756744:+|nuORF	1.4187509189679102	0.8902079234491285	2				NaN	NaN	0	NaN	3143	2781	5924
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5927	19.57	NaN	7475.3	30	0	1414.4	0.106	+			32922	REAEERVQKSL	11	66	448.9119660239021	1343.7140686719063	3	448.9124450683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_REAEERVQKSL_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	49.280055037864464	0.43096356235087463	2				NaN	NaN	0	NaN	3144	2781	5924
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5928	19.571	NaN	7388.9	30	0	3128.3	0.106	+			34980	SAAPPTVGR	9	47	428.2375952623908	NaN	0	428.2378845214844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SAAPPTVGR_	ENSG00000164050|ENST00000296440|PLXNB1;nc|ENSG00000164050|O43157-2|PLXNB1;nc|ENSG00000164050|O43157-3|PLXNB1;PLXNB1|p.L900Sfs*25|1|0.11|ENSG00000164050|chr3:48419592-48419592|G/-|frameshift_variant	56.43379154798735	0.16452882468284893	2				NaN	NaN	0	NaN	3145	2781	5924
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5929	19.573	NaN	1236.9	30	0	317.16	0.039	+			1438	AEYHAKATEHL	11	40	423.87957763671875	NaN	0	423.87957763671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEYHAKATEHL_	ENSG00000118137|ENST00000236850|APOA1	55.08391021199286	0.27880418946526786	2				NaN	NaN	0	NaN	3146	2781	5924
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5947	19.61	NaN	128930	30	0	72518	0.178	+			49133	VVMAADRSLKK	11	74	406.5721332845702	1216.6945704539107	3	406.5725402832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVMAADRSLKK_	ENSG00000189241|ENST00000368608|TSPYL1	99.78786539795823	0.061125669442822994	2				NaN	NaN	0	NaN	3161	2784	5946
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5948	19.613	NaN	2352	30	0	523.69	0.106	+			31921	QQLSFRLQ	8	49	510.2861886332716	1018.5578243333432	2	510.2870788574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QQLSFRLQ_	ENSG00000154358|ENST00000680850|OBSCN;ENSG00000154358|ENST00000680850|OBSCN;nc|ENSG00000154358|Q5VST9-2|OBSCN;nc|ENSG00000154358|Q5VST9-3|OBSCN;nc|ENSG00000154358|Q5VST9-5|OBSCN;nc|ENSG00000154358|Q5VST9-6|OBSCN;nc|ENSG00000154358|Q5VST9|OBSCN;OBSCN|p.E4688Dfs*35|1|0.03|ENSG00000154358|chr1:228318105-228318106|-/CATCTTC|frameshift_variant;OBSCN|p.E4688Dfs*35|1|0.03|ENSG00000154358|chr1:228318105-228318106|-/CATCTTC|frameshift_variant;OBSCN|p.E4729Rfs*7|1|0.37|ENSG00000154358|chr1:228318930-228318931|-/C|frameshift_variant;OBSCN|p.E4729Rfs*7|1|0.37|ENSG00000154358|chr1:228318930-228318931|-/C|frameshift_variant;OBSCN|p.G1702Vfs*37|2|0.36|ENSG00000154358|chr1:228268769-228268769|G/-|frameshift_variant;OBSCN|p.H7050Tfs*22|1|0.11|ENSG00000154358|chr1:228371922-228371922|C/-|frameshift_variant;OBSCN|p.H7050Tfs*22|1|0.11|ENSG00000154358|chr1:228371922-228371922|C/-|frameshift_variant;OBSCN|p.P6994Lfs*78|1|0.15|ENSG00000154358|chr1:228371756-228371756|C/-|frameshift_variant;OBSCN|p.P6994Lfs*78|1|0.15|ENSG00000154358|chr1:228371756-228371756|C/-|frameshift_variant;OBSCN|p.S5232Ffs*24|1|0.21|ENSG00000154358|chr1:228332900-228332901|-/T|frameshift_variant;OBSCN|p.S5232Ffs*24|1|0.21|ENSG00000154358|chr1:228332900-228332901|-/T|frameshift_variant;OBSCN|p.V3709Sfs*15|1|0.03|ENSG00000154358|chr1:228293609-228293610|-/A|frameshift_variant;OBSCN|p.V3709Sfs*15|1|0.03|ENSG00000154358|chr1:228293609-228293610|-/A|frameshift_variant	74.25504064058377	0.37144338840759816	2				NaN	NaN	0	NaN	3162	2784	5946
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5949	19.615	NaN	954.34	30	0	241.54	0.106			+	31237	QHCREQWYQIF	11	53	769.353271484375	NaN	0	769.353271484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QHCREQWYQIF_	REV__ENSG00000178115|ENST00000562783|GOLGA8Q;REV__ENSG00000186399|ENST00000327271|GOLGA8R;REV__ENSG00000188626|ENST00000563027|GOLGA8M;REV__ENSG00000206127|ENST00000509311|GOLGA8O;REV__ENSG00000232653|ENST00000448387|GOLGA8N;REV__ENSG00000261739|ENST00000562295|GOLGA8S	9.21180021271957	0.456735970842152	2				NaN	NaN	0	NaN	3163	2784	5946
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5950	19.617	NaN	1809.2	30	0	323.8	0.106			+	33488	RKDQTQPA	8	50	472.2508489616763	942.4871449901526	2	472.2510986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RKDQTQPA_	REV__NPAS1|p.G460D|1|0.34|ENSG00000130751|chr19:47045257-47045257|G/A|missense_variant	31.954861631926434	0.7126016770032289	2				NaN	NaN	0	NaN	3164	2784	5946
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5951	19.618	NaN	2145.7	30	0	608.94	0.106	+			16419	HESAAHAIV	9	36	467.7403362055714	933.4661194779428	2	467.74041748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HESAAHAIV_	ENSG00000116001|ENST00000433529|TIA1;ENSG00000151923|ENST00000436547|TIAL1;ENST00000482876.5_1_2:70442329-70444102:-|nuORF;ENST00000489822.5_1_10:121336540-121356247:-|nuORF;ENST00000497671.5_1_10:121335179-121339984:-|nuORF;nc|ENSG00000116001|P31483-2|TIA1;nc|ENSG00000151923|Q01085-2|TIAL1	31.954861631926434	0.5046124803899898	2				NaN	NaN	0	NaN	3165	2784	5946
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5952	19.62	NaN	2696	30	0	1011.2	0.106	+			22024	KSGTTIALK	9	46	459.78412249344007	917.5536920536802	2	459.7841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KSGTTIALK_	DIAPH1|p.P677Hfs*91|1|0.28|ENSG00000131504|chr5:141573820-141573820|G/-|frameshift_variant;DIAPH1|p.P703Hfs*65|2|0.51|ENSG00000131504|chr5:141573742-141573742|G/-|frameshift_variant;ENSG00000131504|ENST00000389054|DIAPH1;nc|ENSG00000131504|O60610-2|DIAPH1;nc|ENSG00000131504|O60610-3|DIAPH1	56.43379154798735	0.2433427591689151	2				NaN	NaN	0	NaN	3166	2784	5946
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5953	19.622	NaN	1339.5	30	0	84.157	0.045	+			17083	HRYWWCGYYRY	11	45	551.5788137949742	1651.7146119851222	3	551.5817260742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HRYWWCGYYRY_	ENST00000602591.1_1_6:30256646-30256907:-|nuORF	0.37141330420238305	0.902963125519592	2				NaN	NaN	0	NaN	3167	2784	5946
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5971	19.657	NaN	3208.4	30	0	459.03	0.214	+			27778	MRPSVSAG	8	55	402.70477193924387	803.3949909452878	2	402.7052917480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MRPSVSAG_	ENST00000367025.7_1_1:209933439-209933502:+|nuORF	76.84663266511073	0.3498490246073164	2				NaN	NaN	0	NaN	3182	2787	5970
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5972	19.66	NaN	19356	30	0	3231.5	0.106				-1	 	0	69	470.26611019505253	938.5176674569051	2	470.26629638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3183	2787	5970
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5973	19.662	NaN	1750.8	30	0	300.26	0.106	+			28759	NPDESSKPNM	10	61	559.7428405027822	NaN	0	559.7429809570312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NPDESSKPNM_	ENSG00000171557|ENST00000336098|FGG;nc|ENSG00000171557|P02679-2|FGG	70.39856735676683	0.14936190052600148	2				NaN	NaN	0	NaN	3184	2787	5970
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5974	19.664	NaN	803.45	30	0	259.08	0.106			+	14429	GTAREPAIA	9	19	443.24285888671875	NaN	0	443.24285888671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTAREPAIA_	REV__ENST00000302754.5_1_19:12902343-12902412:+|nuORF	18.262085536374414	0.37517301184500873	2				NaN	NaN	0	NaN	3185	2787	5970
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5975	19.666	NaN	1259.5	30	0	147.15	0.034	+			24426	LGASQRFF	8	48	463.24932861328125	NaN	0	463.24932861328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LGASQRFF_	ENSG00000130762|ENST00000378378|ARHGEF16;nc|ENSG00000130762|Q5VV41-2|ARHGEF16	47.91560031466742	1.7418937515398478	2				NaN	NaN	0	NaN	3186	2787	5970
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5993	19.703	NaN	2408.5	30	0	1015	0.214	+			49134	VVMAADRSLKK	11	32	406.5721332845702	1216.6945704539107	3	406.2375793457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVMAADRSLKK_	ENSG00000189241|ENST00000368608|TSPYL1	26.063383197487333	0.7164075632144343	2				NaN	NaN	0	NaN	3201	2790	5992
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5994	19.706	NaN	2574	30	0	466.32	0.106			+	4745	ATMPRPTQ	8	51	451.23076740005496	900.4469818669099	2	451.231689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATMPRPTQ_	REV__CNTNAP1|p.R1226Q|1|0.22|ENSG00000108797|chr17:42697662-42697662|G/A|missense_variant	39.252832667884924	0.6609488554722044	2				NaN	NaN	0	NaN	3202	2790	5992
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5995	19.708	NaN	515.2	30	0	125.08	0.041	+			31105	QFRFLQTSPKI	11	24	455.5929260253906	NaN	0	455.5929260253906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QFRFLQTSPKI_	ENSG00000198883|ENST00000535214|PNMA5	12.95748067046073	0.456735970842152	2				NaN	NaN	0	NaN	3203	2790	5992
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6013	19.745	NaN	35210	30	0	7388.3	0.141				-1	 	0	79	429.23970481247295	856.4648566917459	2	429.23980712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3218	2793	6012
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6031	19.783	NaN	3263.7	30	0	1282.3	0.145			+	35740	SDSANTQIRI	10	33	368.8584100937762	NaN	0	368.8660583496094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SDSANTQIRI_	REV__TMEM131|p.K298Q|1|0.06|ENSG00000075568|chr2:97834838-97834838|T/G|missense_variant	41.42661286455405	0.3598046802465243	2				NaN	NaN	0	NaN	3233	2796	6030
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6049	19.821	NaN	2172.1	30	0	278.87	0.214			+	34602	RVNPKNVA	8	57	449.2664755628988	896.5183981925976	2	449.266357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVNPKNVA_	REV__tr|U7T011|U7T011_FUSNUCyclohexadienyldehydrataseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00848PE=3SV=1	50.0245360154114	0.5941082100236891	2				NaN	NaN	0	NaN	3248	2799	6048
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6050	19.824	NaN	3613	30	0	472.08	0.045			+	-1	ELCIPTYMS	9	58	557.2516479922083	1112.4887430512165	2	557.2527465820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_ELC(Carbamidomethyl (C))IPTYMS_	REV__ENSG00000177283|ENST00000374694|FZD8	30.503639358989545	0.5181749237905803	2				NaN	NaN	0	NaN	3249	2799	6048
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6068	19.862	NaN	13427	30	0	2252.6	0.214			+	-1	WWMWRMFSSHR	11	67	547.9111896402754	1640.7117395210262	3	547.912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_WWM(Oxidation (M))WRM(Oxidation (M))FSSHR_	REV__ENSG00000072042|ENST00000381346|RDH11;REV__ENST00000553582.5_1_14:68129224-68156858:-|nuORF;REV__ENST00000553816.5_1_14:68151682-68162420:-|nuORF;REV__ENST00000554493.1_1_14:68129224-68156947:-|nuORF;REV__nc|ENSG00000072042|Q8TC12-2|RDH11;REV__nc|ENSG00000072042|Q8TC12-3|RDH11	3.0259717701125908	0.8706340759722554	2				NaN	NaN	0	NaN	3264	2802	6067
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6069	19.866	NaN	5151.2	30	0	943.92	0.106	+			8688	EEAGGRPAM	9	42	459.21036907525973	916.4061852173195	2	459.2105712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EEAGGRPAM_	ENSG00000153187|ENST00000640218|HNRNPU;ENST00000476241.2_2_1:245025757-245027609:-|nuORF;nc|ENSG00000153187|Q00839-2|HNRNPU	111.64827973302667	0.027316110422332632	2				NaN	NaN	0	NaN	3265	2802	6067
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6070	19.868	NaN	2377.6	30	0	1721.2	0.106	+			17153	HTASPTGMMK	10	33	530.7486068552095	1059.4826607772188	2	530.7493896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HTASPTGMMK_	ENSG00000150961|ENST00000280551|SEC24D;nc|ENSG00000150961|O94855-2|SEC24D	56.43379154798735	0.3982744522255666	2				NaN	NaN	0	NaN	3266	2802	6067
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6071	19.87	NaN	788.71	30	0	374.72	0.106			+	-1	WFYMTVKI	8	19	368.5243835449219	NaN	0	368.5243835449219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_WFYM(Oxidation (M))TVKI_	REV__PAK2|p.S371Vfs*67|1|0.31|ENSG00000180370|chr3:196818111-196818111|A/-|frameshift_variant	25.450171626174864	1.7418937515398478	2				NaN	NaN	0	NaN	3267	2802	6067
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6072	19.871	NaN	445.36	30	0	117.15	0.106			+	16859	HPFPSCRVF	9	22	545.2705688476562	NaN	0	545.2705688476562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HPFPSCRVF_	REV__ENST00000530222.5_1_14:24685071-24685203:-|nuORF	30.503639358989545	0.3235605894931338	2				NaN	NaN	0	NaN	3268	2802	6067
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6073	19.873	NaN	3057.5	30	0	644.19	0.038				-1	TVHLVCRDQA	10	36	400.20608322895566	1197.596420287067	3	400.54071044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_TVHLVC(Carbamidomethyl (C))RDQA_	nc|ENSG00000102796|A0PJE2|DHRS12	31.634271133179894	0.6214930414500597	2				NaN	NaN	0	NaN	3269	2802	6067
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6074	19.874	NaN	488.47	30	0	56.195	0.14	+			34497	RVFTEGTCK	9	41	520.7629525747261	NaN	0	520.7630615234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RVFTEGTCK_	ENSG00000138111|ENST00000238936|MFSD13A	54.722347961057174	0.17414871455573902	2				NaN	NaN	0	NaN	3270	2802	6067
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6092	19.913	NaN	14343	30	0	7541.7	0.214	+			14387	GTAKSQFLK	9	68	490.2816868140023	978.5488206948046	2	490.2818298339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTAKSQFLK_	ENSG00000073111|ENST00000265056|MCM2;ENST00000474964.5_1_3:127323572-127340613:+|nuORF;ENST00000477668.5_1_3:127323572-127337961:+|nuORF	138.06239232086	0.011389075116295402	2				NaN	NaN	0	NaN	3285	2805	6091
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6093	19.917	NaN	18049	30	0	2796.8	0.106				-1	 	0	68	470.78181801348626	939.5490830937725	2	470.7818908691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3286	2805	6091
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6094	19.919	NaN	2967.9	30	0	757.44	0.106	+			48886	VVDENAVAK	9	60	472.75534441118424	943.4961358891685	2	472.7555236816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVDENAVAK_	ADH1B|p.A318Lfs*29|1|0.06|ENSG00000196616|chr4:99311533-99311533|C/-|frameshift_variant;ENSG00000187758|ENST00000209668|ADH1A;ENSG00000196616|ENST00000305046|ADH1B;ENSG00000248144|ENST00000515683|ADH1C;nc|ENSG00000196616|P00325-2|ADH1B	76.16968421966216	0.11411088698345859	2				NaN	NaN	0	NaN	3287	2805	6091
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6095	19.921	NaN	2151.1	30	0	125.37	0.106	+			15932	HADVGKEL	8	58	434.72953383552004	867.4445147378401	2	434.7295227050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HADVGKEL_	ENSG00000144554|ENST00000675286|FANCD2;ENST00000438741.1_1_3:10076402-10082221:+|nuORF;FANCD2|p.I1249Nfs*2|1|0.48|ENSG00000144554|chr3:10090346-10090347|-/A|frameshift_variant;FANCD2|p.N890Ifs*14|1|0.36|ENSG00000144554|chr3:10073312-10073312|A/-|frameshift_variant;nc|ENSG00000144554|Q9BXW9-1|FANCD2;nc|ENSG00000144554|Q9BXW9-3|FANCD2;nc|ENSG00000144554|Q9BXW9-4|FANCD2	77.31757898189308	0.345924878368729	2				NaN	NaN	0	NaN	3288	2805	6091
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6096	19.923	NaN	2574.8	30	0	447.55	0.106			+	13093	GFVNAHVV	8	47	421.73068258536955	841.4468122375391	2	421.7311706542969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GFVNAHVV_	REV__ENSG00000089053|ENST00000261819|ANAPC5;REV__ENST00000536416.5_1_12:121783870-121790143:-|nuORF;REV__ENST00000544442.5_1_12:121784793-121790143:-|nuORF;REV__ENST00000545801.1_1_12:121785603-121790107:-|nuORF	44.53106598305862	0.628196326904373	2				NaN	NaN	0	NaN	3289	2805	6091
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6097	19.924	NaN	67914	30	0	20539	0.039				-1	 	0	104	406.58656930015707	1216.7378785006713	3	406.5869445800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3290	2805	6091
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6098	19.925	NaN	3255.7	30	0	973.42	0.143	+			33584	RLLLRSVAVR	10	39	394.93083088316257	1181.7706632496877	3	394.9309387207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RLLLRSVAVR_	ENST00000564322.1_1_9:841703-894198:+|nuORF	20.030474535948922	0.7146664069068879	2				NaN	NaN	0	NaN	3291	2805	6091
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6116	19.964	NaN	8160.2	30	0	2430.2	0.214	+			22012	KSGEVAVLK	9	55	465.78422598284817	929.5538990324964	2	465.7843322753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSGEVAVLK_	ENSG00000124596|ENST00000424266|OARD1;ENST00000465893.1_1_6:41037763-41039373:-|nuORF	85.86182877749512	0.07653218437724067	2				NaN	NaN	0	NaN	3306	2808	6115
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6117	19.968	NaN	10597	30	0	1709.2	0.106	+			39243	STAKSQFLK	9	72	505.28705568151344	1008.5595584298269	2	505.287353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STAKSQFLK_	ENSG00000076003|ENST00000264156|MCM6;ENST00000492091.1_1_2:136609063-136622601:-|nuORF;MCM6|p.R771Efs*3|1|0.33|ENSG00000076003|chr2:135844583-135844583|T/-|frameshift_variant	163.1509380574825	0.003936019289634439	2				NaN	NaN	0	NaN	3307	2808	6115
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6118	19.97	NaN	4306.3	30	0	1158.3	0.106	+			16232	HEEAIHAV	8	51	453.2269968130757	904.4394406929514	2	453.22705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HEEAIHAV_	ENSG00000090372|ENST00000263280|STRN4;ENST00000594581.5_1_19:47223861-47225468:-|nuORF;ENST00000601869.1_1_19:47223861-47224062:-|nuORF;nc|ENSG00000090372|Q9NRL3-3|STRN4	119.22118168366049	0.23566888071072137	2				NaN	NaN	0	NaN	3308	2808	6115
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6119	19.972	NaN	1116	30	0	284.49	0.106			+	24422	LGASFGRR	8	35	432.2451477050781	NaN	0	432.2451477050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LGASFGRR_	REV__ENSG00000112273|ENST00000510882|HDGFL1;REV__HDGFL1|p.E81D|1|0.17|ENSG00000112273|chr6:22569818-22569818|A/C|missense_variant	31.954861631926434	1.7418937515398478	2				NaN	NaN	0	NaN	3309	2808	6115
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6120	19.974	NaN	1681.7	30	0	224.95	0.106	+			15943	HAFGGNKASY	10	53	526.251796466073	NaN	0	526.251708984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HAFGGNKASY_	ENSG00000067596|ENST00000262415|DHX8;ENST00000587044.1_1_17:41568567-41594747:+|nuORF	98.62937762414208	0.021229059441098482	2				NaN	NaN	0	NaN	3310	2808	6115
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6121	19.976	NaN	6109.8	30	0	1938.7	0.036	+			37814	SMMKAVLKK	9	60	345.8728334806416	1034.5966710421249	3	345.8731384277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SMMKAVLKK_	ENST00000317615.10_1_18:12720618-12724532:+|nuORF	36.446750945000026	0.4619375763483977	2				NaN	NaN	0	NaN	3311	2808	6115
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6122	19.976	NaN	1380.2	30	0	586.2	0.142			+	21853	KRKKLPKDK	9	25	380.92356620855253	1139.7488692258576	3	380.9239196777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KRKKLPKDK_	REV__ENSG00000164190|ENST00000282516|NIPBL;REV__ENST00000504430.5_1_5:36961623-36995905:+|nuORF;REV__nc|ENSG00000164190|Q6KC79-2|NIPBL;REV__nc|ENSG00000164190|Q6KC79-3|NIPBL;REV__NIPBL|p.F1423Lfs*15|1|0.43|ENSG00000164190|chr5:37008032-37008032|T/-|frameshift_variant;REV__NIPBL|p.I2776Lfs*3|1|0.17|ENSG00000164190|chr5:37064797-37064797|A/-|frameshift_variant;REV__NIPBL|p.K603Sfs*11|2|0.29|ENSG00000164190|chr5:36984981-36984981|A/-|frameshift_variant;REV__NIPBL|p.L2220Ffs*3|1|0.21|ENSG00000164190|chr5:37048567-37048568|-/T|frameshift_variant	20.94693142431847	0.6074874384046576	2				NaN	NaN	0	NaN	3312	2808	6115
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6140	20.016	NaN	5851.3	30	0	720.25	0.214				-1	 	0	54	482.7634987045748	963.5124444759496	2	482.7636413574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3327	2811	6139
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6141	20.019	NaN	7444.3	30	0	1708.8	0.106	+			19771	KEAETRAEF	9	71	540.7690869604022	1079.5236209876043	2	540.7699584960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEAETRAEF_	CON__Q3SX28;ENSG00000140416|ENST00000403994|TPM1;ENSG00000143549|ENST00000651641|TPM3;ENSG00000167460|ENST00000643579|TPM4;ENSG00000198467|ENST00000645482|TPM2;ENST00000368528.3_1_3:27674554-27675208:+|nuORF;ENST00000397772.2_1_20:32500135-32500381:-|nuORF;ENST00000469717.5_1_1:154130117-154143232:-|nuORF;ENST00000520239.1_1_8:70042334-70042577:+|nuORF;ENST00000558264.5_1_15:63353458-63363368:+|nuORF;ENST00000559108.1_1_15:63354467-63358183:+|nuORF;nc|ENSG00000140416|P09493-10|TPM1;nc|ENSG00000140416|P09493-2|TPM1;nc|ENSG00000140416|P09493-3|TPM1;nc|ENSG00000140416|P09493-4|TPM1;nc|ENSG00000140416|P09493-5|TPM1;nc|ENSG00000140416|P09493-6|TPM1;nc|ENSG00000140416|P09493-7|TPM1;nc|ENSG00000140416|P09493-8|TPM1;nc|ENSG00000140416|P09493-9|TPM1;nc|ENSG00000143549|P06753-2|TPM3;nc|ENSG00000143549|P06753-3|TPM3;nc|ENSG00000143549|P06753-4|TPM3;nc|ENSG00000143549|P06753-5|TPM3;nc|ENSG00000143549|P06753-6|TPM3;nc|ENSG00000143549|P06753-7|TPM3;nc|ENSG00000167460|P67936-2|TPM4;nc|ENSG00000198467|P07951-2|TPM2;nc|ENSG00000198467|P07951-3|TPM2;TPM3|p.A243T|1|0.29|ENSG00000143549|chr1:154170448-154170448|C/T|missense_variant	143.37361013837676	0.008897369944672323	2				NaN	NaN	0	NaN	3328	2811	6139
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6142	20.021	NaN	3323.3	30	0	816.42	0.106	+			39945	STMGYMAAK	9	54	488.21683424048433	974.4191155477687	2	488.2170715332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_STM(Oxidation (M))GYMAAK_	ENSG00000080824|ENST00000216281|HSP90AA1;ENST00000436135.1_1_1:158495283-158495625:+|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1	79.71258880314673	0.09879134589249085	2				NaN	NaN	0	NaN	3329	2811	6139
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6143	20.023	NaN	1317.3	30	0	200.47	0.034	+			8254	EAGADPSLR	9	50	458.2299144465209	914.4452759598419	2	458.2297668457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EAGADPSLR_	ENSG00000154065|ENST00000592179|ANKRD29	56.72105179125745	0.24094814563026265	2				NaN	NaN	0	NaN	3330	2811	6139
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6161	20.061	NaN	8213.9	30	0	3183.6	0.214	+			35330	SANTAAFAK	9	59	440.7295454963972	879.4445380595944	2	440.7295837402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SANTAAFAK_	ENSG00000205302|ENST00000379516|SNX2;ENST00000514030.1_1_5:122153007-122163181:+|nuORF;nc|ENSG00000205302|O60749-2|SNX2	150.36159442982594	0.006784847064083231	2				NaN	NaN	0	NaN	3345	2814	6160
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6162	20.064	NaN	3735.7	30	0	912.16	0.106	+			41667	SVRPPGASM	9	56	451.23076740005496	900.4469818669099	2	451.2259826660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVRPPGASM_	ENST00000590096.1_1_19:10654706-10657792:+|nuORF	45.9519527083369	0.35044536499095585	2				NaN	NaN	0	NaN	3346	2814	6160
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6163	20.066	NaN	15386	30	0	5337.3	0.106	+			4964	ATQTSVVVK	9	59	466.77395051040867	931.5333480876174	2	466.77374267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATQTSVVVK_	ENSG00000158636|ENST00000695367|EMSY;ENST00000531641.1_1_11:76237526-76255878:+|nuORF;nc|ENSG00000158636|Q7Z589-2|EMSY;nc|ENSG00000158636|Q7Z589-4|EMSY;nc|ENSG00000158636|Q7Z589-5|EMSY;nc|ENSG00000158636|Q7Z589-6|EMSY;nc|ENSG00000158636|Q7Z589|EMSY	123.20810148215591	0.019257656778428764	2				NaN	NaN	0	NaN	3347	2814	6160
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6164	20.068	NaN	2780	30	0	1830.5	0.033	+			17037	HPVRGTLA	8	46	425.74835138856366	NaN	0	425.7482604980469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HPVRGTLA_	RAE1|p.H285R|1|0.31|ENSG00000101146|chr20:57374635-57374635|A/G|missense_variant	19.359975847455235	1.7418937515398478	2				NaN	NaN	0	NaN	3348	2814	6160
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6182	20.106	NaN	10653	30	0	2125.7	0.214				-1	 	0	63	429.23970481247295	856.4648566917459	2	429.2398681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3363	2817	6181
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6183	20.109	NaN	1677.5	30	0	826.74	0.106				-1	SVFTCLAIALG	11	29	384.5411682128906	NaN	0	384.5411682128906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SVFTC(Carbamidomethyl (C))LAIALG_	ENSG00000137500|ENST00000529689|CCDC90B;ENST00000260054.8_1_11:82972955-82984922:-|nuORF;nc|ENSG00000137500|Q9GZT6-2|CCDC90B;nc|ENSG00000137500|Q9GZT6-3|CCDC90B	27.047317107675042	0.44487757903053116	2				NaN	NaN	0	NaN	3364	2817	6181
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6184	20.111	NaN	7050.2	30	0	2166.4	0.106			+	16729	HLIHNARHQE	10	33	418.8853308467892	1253.6341631405676	3	419.2197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HLIHNARHQE_	REV__ENSG00000035681|ENST00000038176|NSMAF;REV__ENST00000522645.5_1_8:59543991-59572190:-|nuORF;REV__nc|ENSG00000035681|Q92636-2|NSMAF;REV__NSMAF|p.R751Dfs*16|1|0.2|ENSG00000035681|chr8:58587662-58587662|T/-|frameshift_variant	22.579656572578934	0.6954366826851017	2				NaN	NaN	0	NaN	3365	2817	6181
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6185	20.113	NaN	2877.1	30	0	675.3	0.106	+			432	AAVDAGMAM	9	54	434.68037303411256	867.3461931350251	2	434.6807556152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Oxidation (M)	_AAVDAGM(Oxidation (M))AM(Oxidation (M))_	ENSG00000011304|ENST00000356948|PTBP1;ENST00000586944.5_1_19:797434-805231:+|nuORF;nc|ENSG00000011304|P26599-1|PTBP1;nc|ENSG00000011304|P26599-2|PTBP1	65.80317337860623	0.1652391959156183	2				NaN	NaN	0	NaN	3366	2817	6181
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6186	20.115	NaN	1051.5	30	0	215.69	0.036	+			6114	AVNPKEIASK	10	42	528.8054136096031	1055.596274286006	2	528.806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVNPKEIASK_	ENSG00000113810|ENST00000357388|SMC4;ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4	48.601550744091256	0.46988609897316763	2				NaN	NaN	0	NaN	3367	2817	6181
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6204	20.152	NaN	6239.4	30	0	1107.3	0.141			+	45707	VAALASGPPS	10	65	435.23977606028666	868.4649991873733	2	435.24005126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VAALASGPPS_	REV__ENSG00000160113|ENST00000291442|NR2F6	45.9519527083369	0.4943008177357963	2				NaN	NaN	0	NaN	3382	2820	6203
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6222	20.19	NaN	84489	30	0	27294	0.214				-1	 	0	65	341.1852877815402	1020.5340339448205	3	341.1856689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3397	2823	6221
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6223	20.194	NaN	2264.2	30	0	226.15	0.106				-1	WCCRRRCCSRR	11	54	571.5900942669012	1711.7484534009036	3	571.9256591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	4 Carbamidomethyl (C)	_WC(Carbamidomethyl (C))C(Carbamidomethyl (C))RRRC(Carbamidomethyl (C))C(Carbamidomethyl (C))SRR_	RNF169|p.A38Pfs*140|1|0.12|ENSG00000166439|chr11:74748989-74748989|G/-|frameshift_variant	0.37141330420238305	0.902963125519592	2				NaN	NaN	0	NaN	3398	2823	6221
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6224	20.196	NaN	2204.7	30	0	832.83	0.106	+			42906	TEHMTRTL	8	48	494.74770848012645	987.4808640270529	2	494.7481384277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TEHMTRTL_	ENSG00000129351|ENST00000588657|ILF3;ENST00000587928.5_1_19:10781281-10792148:+|nuORF;nc|ENSG00000129351|Q12906-2|ILF3;nc|ENSG00000129351|Q12906-3|ILF3;nc|ENSG00000129351|Q12906-4|ILF3;nc|ENSG00000129351|Q12906-5|ILF3;nc|ENSG00000129351|Q12906-6|ILF3;nc|ENSG00000129351|Q12906|ILF3	74.25504064058377	0.37144338840759816	2				NaN	NaN	0	NaN	3399	2823	6221
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6225	20.198	NaN	5518.5	30	0	624.79	0.106	+			16841	HPEELLGR	8	66	475.7561492145614	NaN	0	475.75634765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HPEELLGR_	ENSG00000116016|ENST00000263734|EPAS1	68.484700416344	1.7418937515398478	2				NaN	NaN	0	NaN	3400	2823	6221
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6226	20.2	NaN	835.19	30	0	116.54	0.034	+			41631	SVQSAVVSK	9	41	452.7586565908537	NaN	0	452.7589111328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVQSAVVSK_	ENSG00000165406|ENST00000453424|MARCHF8	58.2462437865262	0.1567987007793744	2				NaN	NaN	0	NaN	3401	2823	6221
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6245	20.235	NaN	2065.4	30	0	366.84	0.214			+	26951	LYGRVGAQ	8	51	432.2400925321178	862.4656321310356	2	432.2401428222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LYGRVGAQ_	REV__ENSG00000130518|ENST00000392413|IQCN;REV__ENST00000599638.2_1_19:18367992-18369432:-|nuORF;REV__nc|ENSG00000130518|Q9H0B3-3|IQCN;REV__nc|ENSG00000130518|Q9H0B3-5|IQCN;REV__nc|ENSG00000130518|Q9H0B3|IQCN	60.29395666154354	0.49887135096048313	2				NaN	NaN	0	NaN	3417	2826	6244
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6246	20.239	NaN	4937.4	30	0	2529.3	0.106	+			22455	KTLGPILKK	9	54	333.2301560634862	996.6686387906586	3	333.2304382324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTLGPILKK_	ENSG00000006652|ENST00000403825|IFRD1;ENST00000466459.5_1_7:112097053-112108063:+|nuORF;nc|ENSG00000288640|O00458-2|IFRD1	101.25262130126117	0.03792372629710479	2				NaN	NaN	0	NaN	3418	2826	6244
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6247	20.241	NaN	3311.3	30	0	336.06	0.106	+			36526	SFENVRAK	8	58	475.7561492145614	NaN	0	475.7560729980469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SFENVRAK_	ENSG00000136238|ENST00000348035|RAC1;ENSG00000169750|ENST00000306897|RAC3;ENST00000488373.5_1_7:6415539-6442074:+|nuORF;nc|ENSG00000136238|P63000-2|RAC1	93.19546047674547	1.7418937515398478	2				NaN	NaN	0	NaN	3419	2826	6244
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6248	20.242	NaN	483.19	30	0	52.687	0.106	+			21817	KREEAKKI	8	33	501.308837890625	NaN	0	501.308837890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KREEAKKI_	ENST00000466974.5_1_20:5922633-5923195:-|nuORF;TRMT6|p.K295Nfs*64|1|0.37|ENSG00000089195|chr20:5942569-5942569|T/-|frameshift_variant	56.72105179125745	1.7418937515398478	2				NaN	NaN	0	NaN	3420	2826	6244
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6249	20.244	NaN	2763.8	30	0	814.13	0.106	+			13368	GLALSSVRLR	10	35	357.8922111022726	1070.6548039070178	3	357.89251708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GLALSSVRLR_	CD14|p.L147V|1|0.31|ENSG00000170458|chr5:140632545-140632545|A/C|missense_variant	35.15202426646627	0.5927656479315102	2				NaN	NaN	0	NaN	3421	2826	6244
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6250	20.246	NaN	771.59	30	0	203.4	0.106			+	49376	VVSVGVAAK	9	29	415.2611389160156	NaN	0	415.2611389160156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VVSVGVAAK_	REV__ENSG00000119714|ENST00000650645|GPR68	44.116797842482775	0.2472372736944149	2				NaN	NaN	0	NaN	3422	2826	6244
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6251	20.248	NaN	375.19	30	0	78.676	0.035			+	26918	LYEIELIE	8	29	511.27508544921875	NaN	0	511.27508544921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LYEIELIE_	REV__ENSG00000109906|ENST00000335953|ZBTB16;REV__ENST00000541602.5_1_11:113934022-114057819:+|nuORF;REV__nc|ENSG00000109906|Q05516-2|ZBTB16;REV__ZBTB16|p.E116K|1|0.15|ENSG00000109906|chr11:114063646-114063646|G/A|missense_variant;REV__ZBTB16|p.G496Wfs*27|1|0.28|ENSG00000109906|chr11:114242197-114242198|-/T|frameshift_variant	26.79610172149135	1.7418937515398478	2				NaN	NaN	0	NaN	3423	2826	6244
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6269	20.285	NaN	4605.4	30	0	1469.1	0.214				-1	 	0	59	444.76083039113774	887.5071078490755	2	444.7608337402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3438	2829	6268
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6270	20.289	NaN	1075	30	0	204.76	0.106			+	41482	SVNTLSVK	8	37	424.24730784869996	NaN	0	424.2352600097656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVNTLSVK_	REV__ENSG00000182985|ENST00000331581|CADM1;REV__ENST00000537140.5_1_11:115040311-115375169:-|nuORF;REV__nc|ENSG00000182985|Q9BY67-2|CADM1;REV__nc|ENSG00000182985|Q9BY67-4|CADM1;REV__nc|ENSG00000182985|Q9BY67-5|CADM1;REV__nc|ENSG00000182985|Q9BY67|CADM1	34.172542307311794	1.7418937515398478	2				NaN	NaN	0	NaN	3439	2829	6268
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6271	20.291	NaN	1015.7	30	0	447.71	0.106			+	7521	DGRAQTGIHL	10	21	356.5245666503906	NaN	0	356.5245666503906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DGRAQTGIHL_	REV__ENSG00000178814|ENST00000618853|OPLAH;REV__OPLAH|p.H788Tfs*31|1|0.33|ENSG00000178814|chr8:144055076-144055076|G/-|frameshift_variant;REV__OPLAH|p.H870Tfs*28|1|0.64|ENSG00000178814|chr8:144054639-144054639|G/-|frameshift_variant	23.04248740728303	0.42010282974921537	2				NaN	NaN	0	NaN	3440	2829	6268
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6272	20.293	NaN	13277	30	0	5349	0.106	+			38163	SQCDAIRVTK	10	62	393.204249062807	1176.590917788621	3	393.2048034667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_SQC(Carbamidomethyl (C))DAIRVTK_	ENSG00000120008|ENST00000263461|WDR11;WDR11|p.L1134Gfs*5|1|0.26|ENSG00000120008|chr10:120905977-120905978|CC/-|frameshift_variant;WDR11|p.Q977Sfs*9|1|0.27|ENSG00000120008|chr10:120903226-120903227|-/T|frameshift_variant;WDR11|p.V841Cfs*15|1|0.07|ENSG00000120008|chr10:120900034-120900034|G/-|frameshift_variant	65.2775769800794	0.31784129392001936	2				NaN	NaN	0	NaN	3441	2829	6268
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6273	20.295	NaN	2111.7	30	0	429.62	0.038				-1	VTYHMFRTK	9	36	400.2058326184242	1197.5956684554726	3	400.5399169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_VTYHM(Oxidation (M))FRTK_	ENST00000453465.1_1_10:21915067-21915193:-|nuORF;ENST00000478691.5_1_1:23664326-23665089:-|nuORF	40.05817265558897	0.419577045485086	2				NaN	NaN	0	NaN	3442	2829	6268
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6291	20.332	NaN	5789.9	30	0	619.81	0.212				-1	 	0	76	652.9764597151408	1955.9075497456222	3	653.3114013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3457	2832	6290
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6292	20.336	NaN	2592.7	30	0	285.47	0.106	+			34526	RVHEVFRVGK	10	56	409.575251294833	NaN	0	409.5752868652344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RVHEVFRVGK_	ENST00000393094.6_1_11:107879697-107879871:+|nuORF	91.26522074875469	0.04908179266484229	2				NaN	NaN	0	NaN	3458	2832	6290
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6293	20.338	NaN	2032.4	30	0	429.16	0.106				-1	 	0	52	596.3394619884783	1190.6643710437565	2	596.34033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3459	2832	6290
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6294	20.34	NaN	1179	30	0	108.65	0.106			+	-1	VACIPKSE	8	50	452.2334289550781	NaN	0	452.2334289550781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_VAC(Carbamidomethyl (C))IPKSE_	REV__ENSG00000177225|ENST00000319863|GATD1;REV__ENST00000532320.5_1_11:771189-774104:-|nuORF;REV__nc|ENSG00000177225|Q8NB37-2|GATD1	47.91560031466742	1.7418937515398478	2				NaN	NaN	0	NaN	3460	2832	6290
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6295	20.341	NaN	830.53	30	0	126.16	0.106			+	21286	KLQLSPPN	8	34	448.7633972695683	895.5122416059367	2	448.7633056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KLQLSPPN_	REV__ENST00000473314.6_1_1:25573513-25663592:-|nuORF;REV__ENST00000570165.1_1_1:25662951-25663592:-|nuORF	29.14955571784316	0.7342621283720113	2				NaN	NaN	0	NaN	3461	2832	6290
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6296	20.343	NaN	2545.8	30	0	691.76	0.04	+			48320	VTFLVDRKCQL	11	48	441.24777624860275	NaN	0	441.24774169921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTFLVDRKCQL_	ANKRD30A|p.A432Efs*3|1|0.28|ENSG00000148513|chr10:37142192-37142192|C/-|frameshift_variant;ANKRD30A|p.S651Rfs*8|1|0.03|ENSG00000148513|chr10:37162796-37162797|-/AGATTTATCA|frameshift_variant;ANKRD30B|p.D965Ifs*30|3|0.08|ENSG00000180777|chr18:14848778-14848778|A/-|frameshift_variant;ANKRD30B|p.I472Tfs*16|1|0.08|ENSG00000180777|chr18:14778069-14778070|-/C|frameshift_variant;ANKRD30B|p.S1062Vfs*2|1|0.33|ENSG00000180777|chr18:14850356-14850356|A/-|frameshift_variant;ENSG00000148513|ENST00000361713|ANKRD30A;ENSG00000180777|ENST00000690538|ANKRD30B;nc|ENSG00000180777|Q9BXX2-2|ANKRD30B;nc|ENSG00000180777|Q9BXX2|ANKRD30B	50.033510581677724	0.3150780456176802	2				NaN	NaN	0	NaN	3462	2832	6290
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6297	20.344	NaN	2721.1	30	0	762.51	0.138	+			38687	SSKDIKIG	8	55	424.24730784869996	NaN	0	424.2472839355469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSKDIKIG_	tr|U7T6T2|U7T6T2_FUSNUAutotransporterdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00158PE=4SV=1	68.78682469695295	1.7418937515398478	2				NaN	NaN	0	NaN	3463	2832	6290
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6315	20.383	NaN	10248	30	0	2513	0.214	+			48645	VTSQFISKK	9	49	346.537542272039	1036.590797416317	3	346.8722839355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTSQFISKK_	ENSG00000165458|ENST00000298229|INPPL1;ENST00000535985.1_1_11:71944736-71950103:+|nuORF;INPPL1|p.P976Hfs*155|1|0.31|ENSG00000165458|chr11:72237165-72237165|C/-|frameshift_variant;INPPL1|p.P977Tfs*7|1|0.5|ENSG00000165458|chr11:72237164-72237165|-/C|frameshift_variant;INPPL1|p.R1156Gfs*46|2|0.42|ENSG00000165458|chr11:72237704-72237704|C/-|frameshift_variant;nc|ENSG00000165458|O15357-2|INPPL1	66.96192283764107	0.15557981141143568	2				NaN	NaN	0	NaN	3478	2835	6314
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6316	20.386	NaN	1916.7	30	0	286.93	0.106			+	20796	KIAKDSNEI	9	52	509.2816025933682	1016.5486522535364	2	509.28204345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KIAKDSNEI_	REV__ENSG00000112208|ENST00000370693|BAG2;REV__nc|ENSG00000112208|O95816-2|BAG2	115.49404669440601	0.023927554121326553	2				NaN	NaN	0	NaN	3479	2835	6314
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6317	20.388	NaN	471.49	30	0	74.329	0.106	+			33481	RKAAKVLE	8	32	457.79205322265625	NaN	0	457.79205322265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RKAAKVLE_	ENSG00000178217|ENST00000646907|SH2D4B;nc|ENSG00000178217|Q5SQS7-2|SH2D4B;nc|ENSG00000178217|Q5SQS7-3|SH2D4B;nc|ENSG00000178217|Q5SQS7|SH2D4B;SH2D4B|p.W326Gfs*34|1|0.29|ENSG00000178217|chr10:80609537-80609537|C/-|frameshift_variant	38.80614096846853	1.7418937515398478	2				NaN	NaN	0	NaN	3480	2835	6314
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6318	20.39	NaN	754.45	30	0	78.603	0.106	+			21021	KKIQFADQ	8	38	489.27459716796875	NaN	0	489.27459716796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KKIQFADQ_	nc|ENSG00000158467|Q96HN2-2|AHCYL2	31.529811441608018	1.7418937515398478	2				NaN	NaN	0	NaN	3481	2835	6314
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6319	20.392	NaN	1155.3	30	0	254.47	0.035	+			25975	LSISQPANSQ	10	44	522.7717202501325	1043.5288875670649	2	522.7724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSISQPANSQ_	ENSG00000176542|ENST00000316407|USF3	53.08895987439943	0.42869529153390606	2				NaN	NaN	0	NaN	3482	2835	6314
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6337	20.429	NaN	3680.6	30	0	482.74	0.214	+			19806	KEDDPKAAL	9	55	493.7611952686562	985.5078376041124	2	493.760986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEDDPKAAL_	COPS2|p.F259Lfs*19|1|0.29|ENSG00000166200|chr15:49134047-49134047|A/-|frameshift_variant;COPS2|p.G191Rfs*21|1|0.11|ENSG00000166200|chr15:49134484-49134485|-/T|frameshift_variant;COPS2|p.H176Tfs*7|1|0.14|ENSG00000166200|chr15:49137164-49137165|-/T|frameshift_variant;ENSG00000166200|ENST00000388901|COPS2;ENST00000558545.1_1_15:49431640-49447775:-|nuORF;nc|ENSG00000166200|P61201-2|COPS2	124.08010499294276	0.018729767491916592	2				NaN	NaN	0	NaN	3497	2838	6336
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6338	20.433	NaN	957.22	30	0	322.61	0.106	+			23073	KVTTVLATK	9	31	480.8078436312699	NaN	0	480.80743408203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVTTVLATK_	ENSG00000048707|ENST00000620676|VPS13D;nc|ENSG00000048707|Q5THJ4-2|VPS13D;VPS13D|p.K3964Nfs*34|1|0.09|ENSG00000048707|chr1:12403831-12403831|A/-|frameshift_variant	40.05817265558897	0.275207446262312	2				NaN	NaN	0	NaN	3498	2838	6336
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6339	20.435	NaN	3346.9	30	0	692.39	0.106	+			16017	HASESRVAL	9	56	485.25931545882247	968.504077984445	2	485.2588195800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HASESRVAL_	ENSG00000107185|ENST00000378078|RGP1;ENST00000496906.1_1_9:35749376-35750743:+|nuORF;RGP1|p.G277Vfs*8|1|0.43|ENSG00000107185|chr9:35752019-35752019|G/-|frameshift_variant	72.87924865735499	0.12833875048249987	2				NaN	NaN	0	NaN	3499	2838	6336
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6340	20.437	NaN	5945.6	30	0	568.48	0.045				-1	HWCVWFWFFQE	11	62	557.9118234924547	1670.7136410775638	3	557.9124755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_HWC(Carbamidomethyl (C))VWFWFFQE_	ENST00000346603.4_1_17:21075288-21081576:+|nuORF	2.851802924193433	0.8727552246761291	2				NaN	NaN	0	NaN	3500	2838	6336
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6358	20.474	NaN	8989.7	30	0	2751.3	0.214	+			34923	SAAGAAFTK	9	55	412.2189976831428	822.4234424330856	2	412.2192687988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAAGAAFTK_	ENSG00000258315|ENST00000439424|C17orf49;ENST00000549857.1_1_17:6918176-6918548:+|nuORF;nc|ENSG00000258315|Q8IXM2-2|BAP18;nc|ENSG00000258315|Q8IXM2-3|BAP18	146.78539889680295	0.007618400906539062	2				NaN	NaN	0	NaN	3515	2841	6357
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6359	20.477	NaN	6261.4	30	0	1114.3	0.106			+	25244	LNHRGLWV	8	68	497.78202710543394	993.5495012776679	2	497.7821960449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LNHRGLWV_	REV__ENSG00000167751|ENST00000325321|KLK2;REV__ENST00000595316.5_1_19:51376719-51380013:+|nuORF;REV__ENST00000597727.5_1_19:51376719-51380306:+|nuORF;REV__ENST00000599280.5_1_19:51376719-51380061:+|nuORF;REV__ENST00000600755.5_1_19:51376705-51380061:+|nuORF;REV__ENST00000601114.1_1_19:51379578-51380013:+|nuORF;REV__nc|ENSG00000167751|P20151-2|KLK2;REV__nc|ENSG00000167751|P20151-3|KLK2	42.47446043378293	0.6409579893742323	2				NaN	NaN	0	NaN	3516	2841	6357
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6360	20.479	NaN	3177.8	30	0	449.64	0.106	+			2340	AMSARAEAI	9	53	468.2342307649811	934.4539085967622	2	468.2344970703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_AM(Oxidation (M))SARAEAI_	ENSG00000162244|ENST00000294189|RPL29;ENST00000480306.5_1_3:52027767-52028806:-|nuORF	65.46538089061403	0.16805504838372562	2				NaN	NaN	0	NaN	3517	2841	6357
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6361	20.481	NaN	2068.5	30	0	961.07	0.106	+			3551	ASTGLSVGGI	10	37	431.23724260403026	860.4599322748605	2	431.23779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASTGLSVGGI_	ENSG00000110074|ENST00000263578|FOXRED1;ENST00000524751.5_1_11:126139211-126143243:+|nuORF;ENST00000526525.1_1_11:126139211-126143019:+|nuORF;ENST00000534011.5_1_11:126142574-126144844:+|nuORF;ENST00000534315.5_1_11:126141345-126145243:+|nuORF;nc|ENSG00000110074|Q96CU9-3|FOXRED1	51.33545320467046	0.4446945571623749	2				NaN	NaN	0	NaN	3518	2841	6357
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6362	20.483	NaN	5391	30	0	2403.4	0.034			+	5271	ATVEKKIK	8	63	458.79500964118444	915.5754663491689	2	458.79486083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATVEKKIK_	REV__tr|U7T3C1|U7T3C1_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00579PE=4SV=1	108.08749611321984	0.24621691167378246	2				NaN	NaN	0	NaN	3519	2841	6357
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6380	20.52	NaN	1340.9	30	0	315.69	0.214	+			34408	RTSSSIVLK	9	43	495.80078741396017	989.5870218947204	2	495.8013610839844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTSSSIVLK_	ENSG00000072201|ENST00000263925|LNX1;nc|ENSG00000072201|Q8TBB1-2|LNX1	65.46538089061403	0.16805504838372562	2				NaN	NaN	0	NaN	3534	2844	6379
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6381	20.523	NaN	2229.1	30	0	658.89	0.106	+			25923	LSGTKGAL	8	36	373.72405592154803	745.4335589098961	2	373.7243957519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSGTKGAL_	nc|ENSG00000049883|Q8WV60-3|PTCD2	58.78195531508484	0.5138399468736706	2				NaN	NaN	0	NaN	3535	2844	6379
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6382	20.525	NaN	608.84	30	0	136.55	0.034			+	27012	LYRGGRLQ	8	32	481.7799359554519	NaN	0	481.780029296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LYRGGRLQ_	REV__ENSG00000139044|ENST00000266383|B4GALNT3;REV__ENST00000535402.1_1_12:662343-670614:+|nuORF	33.51558372728122	1.7418937515398478	2				NaN	NaN	0	NaN	3536	2844	6379
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6400	20.561	NaN	77512	30	0	29007	0.214	+			35278	SALTDKAIVKK	11	91	391.91116140017994	1172.7116548007398	3	391.91180419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SALTDKAIVKK_	ENSG00000176485|ENST00000415826|PLAAT3;ENST00000394613.3_1_11:63342419-63381578:-|nuORF	115.91470973250675	0.028033986879349545	2				NaN	NaN	0	NaN	3551	2847	6399
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6401	20.565	NaN	4212.9	30	0	1071	0.106	+			6781	CFGLRGLLH	9	60	508.2796328988379	1014.5447128644759	2	508.2807312011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_CFGLRGLLH_	ADAM9|p.Y678Wfs*15|1|0.05|ENSG00000168615|chr8:39083037-39083038|-/GGAAACC|frameshift_variant;ENSG00000168615|ENST00000487273|ADAM9;nc|ENSG00000168615|Q13443-2|ADAM9	50.0245360154114	0.3026755932229825	2				NaN	NaN	0	NaN	3552	2847	6399
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6402	20.567	NaN	3525.1	30	0	979.1	0.046			+	4813	ATNTTTSNCTV	11	59	585.257621698518	NaN	0	584.9236450195312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_ATNTTTSNC(Carbamidomethyl (C))TV_	REV__sp|P16810|IR12_HCMVAUncharacterizedproteinIRL12OS=Humancytomegalovirus(strainAD169)OX=10360PE=4SV=1	53.08895987439943	0.2931326677786871	2				NaN	NaN	0	NaN	3553	2847	6399
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6420	20.605	NaN	13929	30	0	1511.8	0.214	+			34966	SAAKTFITK	9	72	483.7841560740808	965.5537592149616	2	483.7842102050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAAKTFITK_	ENSG00000146247|ENST00000275034|PHIP;ENST00000479165.1_1_6:79650412-79665440:-|nuORF	152.06079943815163	0.00638878961959199	2				NaN	NaN	0	NaN	3568	2850	6419
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6421	20.608	NaN	4913.2	30	0	605.05	0.106	+			31581	QLRSVYTQ	8	66	497.7704583876206	993.5263638420412	2	497.77081298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QLRSVYTQ_	ENST00000570164.5_1_16:31500917-31501493:-|nuORF	87.75429964447693	0.2842685068779738	2				NaN	NaN	0	NaN	3569	2850	6419
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6422	20.61	NaN	2208.3	30	0	701.55	0.106			+	49521	VYAESTVAQS	10	41	527.7563008850516	1053.498048836903	2	527.7572631835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYAESTVAQS_	REV__ENSG00000149577|ENST00000324225|SIDT2;REV__nc|ENSG00000149577|Q8NBJ9-2|SIDT2	37.81151784470057	0.569310847604193	2				NaN	NaN	0	NaN	3570	2850	6419
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6423	20.612	NaN	2426.3	30	0	691.14	0.106			+	44459	TSPKAVPAT	9	35	436.24776383586317	NaN	0	436.27154541015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TSPKAVPAT_	REV__sp|F5HC79|TRM1_HCMVMTripartiteterminasesubunit1OS=Humancytomegalovirus(strainMerlin)OX=295027GN=TRM1PE=3SV=1;REV__sp|P16724|TRM1_HCMVATripartiteterminasesubunit1OS=Humancytomegalovirus(strainAD169)OX=10360GN=TRM1PE=3SV=1	40.77816245573522	0.2702456086868081	2				NaN	NaN	0	NaN	3571	2850	6419
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6424	20.614	NaN	1758.2	30	0	430.29	0.106	+			34005	RSIDIHLKK	9	35	370.5645634141626	NaN	0	370.5644836425781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RSIDIHLKK_	ENSG00000088727|ENST00000684063|KIF9;ENST00000484629.1_1_3:47312946-47318864:-|nuORF;ENST00000487440.5_1_3:47281337-47324087:-|nuORF;KIF9|p.D40Tfs*64|1|0.51|ENSG00000088727|chr3:47275467-47275467|T/-|frameshift_variant;KIF9|p.I115Sfs*12|1|0.13|ENSG00000088727|chr3:47273576-47273576|C/-|frameshift_variant;nc|ENSG00000088727|Q9HAQ2-2|KIF9	41.42661286455405	0.26577678759562784	2				NaN	NaN	0	NaN	3572	2850	6419
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6425	20.616	NaN	340.22	30	0	50.519	0.034				-1	VVVAVFVGC	9	23	475.26348876953125	NaN	0	475.26348876953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_VVVAVFVGC(Carbamidomethyl (C))_	ENSG00000125510|ENST00000336866|OPRL1;nc|ENSG00000125510|P41146-2|OPRL1	21.70233525837049	0.3635294413921169	2				NaN	NaN	0	NaN	3573	2850	6419
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6443	20.652	NaN	4294.4	30	0	1036.9	0.214	+			584	ADLAPNKK	8	46	428.7477018041652	855.4808506751305	2	428.748291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ADLAPNKK_	BNC2|p.K630N|1|0.28|ENSG00000173068|chr9:16436304-16436304|C/A|missense_variant	55.50420428727701	0.5462892107279674	2				NaN	NaN	0	NaN	3588	2853	6442
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6444	20.656	NaN	863.02	30	0	240.26	0.106			+	47703	VSFDRDCKGQV	11	31	418.5379333496094	NaN	0	418.5379333496094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSFDRDCKGQV_	REV__ENST00000332995.11_1_6:13289086-13289215:+|nuORF	21.780426970141523	0.456735970842152	2				NaN	NaN	0	NaN	3589	2853	6442
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6445	20.658	NaN	2881.6	30	0	1697.8	0.035	+			31252	QHLGAILASA	10	42	490.7795433848847	NaN	0	490.7808532714844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QHLGAILASA_	ENSG00000126062|ENST00000266025|TMEM115;TMEM115|p.A114Pfs*29|1|0.36|ENSG00000126062|chr3:50358724-50358724|C/-|frameshift_variant	40.77816245573522	0.36390427802201647	2				NaN	NaN	0	NaN	3590	2853	6442
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6463	20.694	NaN	105940	30	0	7975.4	0.213				-1	 	0	100	565.9146056906432	1694.7219876721292	3	565.9153442382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3605	2856	6462
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6464	20.698	NaN	1960.6	30	0	370.41	0.106			+	-1	KMLRTTTK	8	58	497.7872619628906	NaN	0	497.7872619628906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_KM(Oxidation (M))LRTTTK_	REV__ENST00000485167.1_1_1:109318992-109319040:+|nuORF	93.19546047674547	1.7418937515398478	2				NaN	NaN	0	NaN	3606	2856	6462
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6465	20.7	NaN	1358.1	30	0	212.8	0.106	+			4430	ATIENSRIV	9	42	501.7822275170745	1001.549902100949	2	501.78240966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATIENSRIV_	CON__P08727;ENSG00000171345|ENST00000361566|KRT19	29.14955571784316	0.5308295550522326	2				NaN	NaN	0	NaN	3607	2856	6462
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6466	20.702	NaN	5366.3	30	0	998.98	0.106			+	44565	TTASPGPGPL	10	74	449.2372349346407	NaN	0	449.246337890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TTASPGPGPL_	REV__ENST00000463438.5_1_3:14693292-14703332:+|nuORF;REV__ENST00000465759.1_1_3:14693292-14708492:+|nuORF	53.351449002276354	0.2844141321977336	2				NaN	NaN	0	NaN	3608	2856	6462
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6467	20.704	NaN	3083.3	30	0	1053	0.035				-1	AYCGPQVGVG	10	40	336.4917743199765	1006.4534935601296	3	336.4920349121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_AYC(Carbamidomethyl (C))GPQVGVG_	chr8:127322226-127339281|391|12.11|0.0|20.21|+|ENST00000645438|POU5F1B,POU5F1B;ENSG00000204531|ENST00000259915|POU5F1;ENSG00000212993|ENST00000696633|POU5F1B;POU5F1|p.G321Wfs*21|1|0.32|ENSG00000204531|chr6:31164723-31164724|-/A|frameshift_variant;POU5F1|p.V103Gfs*86|1|0.14|ENSG00000204531|chr6:31170313-31170314|-/C|frameshift_variant;POU5F1B|p.G120Wfs*69|1|0.44|ENSG00000212993|chr8:127416216-127416217|-/C|frameshift_variant	39.252832667884924	0.5560298534376815	2				NaN	NaN	0	NaN	3609	2856	6462
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6485	20.741	NaN	24608	30	0	4791.3	0.214	+			44564	TTASFAATK	9	82	449.2372349346407	NaN	0	449.23712158203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTASFAATK_	ENSG00000183864|ENST00000327492|TOB2;nc|ENSG00000183864|Q14106-2|TOB2	58.22992032128504	0.15686832049467786	2				NaN	NaN	0	NaN	3624	2859	6484
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6486	20.745	NaN	4654	30	0	1053	0.106	+			34395	RTSGLATLK	9	58	473.78696044670403	945.5593679602081	2	473.787353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RTSGLATLK_	BTBD7|p.F167Lfs*15|1|0.27|ENSG00000011114|chr14:93294519-93294519|A/-|frameshift_variant;BTBD7|p.H927Tfs*21|1|0.2|ENSG00000011114|chr14:93242893-93242894|-/T|frameshift_variant;BTBD7|p.N566Mfs*22|1|0.26|ENSG00000011114|chr14:93253702-93253702|T/-|frameshift_variant;BTBD7|p.P760Lfs*61|1|0.45|ENSG00000011114|chr14:93246129-93246129|G/-|frameshift_variant;BTBD7|p.P768Qfs*53|2|0.3|ENSG00000011114|chr14:93246105-93246105|G/-|frameshift_variant;BTBD7|p.Y440Mfs*28|1|0.11|ENSG00000011114|chr14:93263838-93263838|A/-|frameshift_variant;ENSG00000011114|ENST00000334746|BTBD7;nc|ENSG00000011114|Q9P203-3|BTBD7	109.43880257439609	0.029570636687953285	2				NaN	NaN	0	NaN	3625	2859	6484
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6487	20.747	NaN	2165.1	30	0	615.79	0.106	+			23028	KVSSVALCK	9	50	467.7726944684414	933.5308360036828	2	467.7728271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KVSSVALCK_	ENSG00000198700|ENST00000361565|IPO9	54.722347961057174	0.257609425301511	2				NaN	NaN	0	NaN	3626	2859	6484
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6488	20.749	NaN	6099.4	30	0	1766.8	0.106	+			893	AEHLEKSSL	9	60	507.26616412348295	1012.5177753137659	2	507.2662048339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEHLEKSSL_	ENSG00000080345|ENST00000444746|RIF1;nc|ENSG00000080345|Q5UIP0-2|RIF1;RIF1|p.E1442Gfs*4|1|0.39|ENSG00000080345|chr2:151463835-151463836|-/A|frameshift_variant;RIF1|p.K1441Rfs*18|1|0.2|ENSG00000080345|chr2:151463836-151463836|A/-|frameshift_variant;RIF1|p.K1505Rfs*18|3|0.3|ENSG00000080345|chr2:151464027-151464027|A/-|frameshift_variant	114.8945686534367	0.024290463251177924	2				NaN	NaN	0	NaN	3627	2859	6484
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6489	20.751	NaN	1262.4	30	0	283.21	0.106	+			10177	ETAAVTVAAA	10	42	452.2425995515064	NaN	0	452.2425231933594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ETAAVTVAAA_	ENST00000607016.1_1_6:34360304-34360421:-|nuORF	44.116797842482775	0.3427969396372342	2				NaN	NaN	0	NaN	3628	2859	6484
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6490	20.752	NaN	1493.6	30	0	457.52	0.04			+	24816	LIQTLQDELVK	11	38	433.9227294921875	NaN	0	433.9227294921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LIQTLQDELVK_	REV__ENSG00000173064|ENST00000682272|HECTD4;REV__HECTD4|p.A4187Pfs*44|1|0.07|ENSG00000173064|chr12:112163201-112163201|C/-|frameshift_variant;REV__nc|ENSG00000173064|Q9Y4D8-4|HECTD4;REV__nc|ENSG00000173064|Q9Y4D8|HECTD4	39.873155843976775	0.387718248623866	2				NaN	NaN	0	NaN	3629	2859	6484
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6491	20.753	NaN	1191	30	0	401.54	0.138			+	31820	QPQPSQAQ	8	36	442.21697366669696	NaN	0	442.2166442871094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QPQPSQAQ_	REV__ENSG00000185666|ENST00000358763|SYN3;REV__ENST00000461446.1_1_22:32910561-32924864:-|nuORF	42.47446043378293	1.7418937515398478	2				NaN	NaN	0	NaN	3630	2859	6484
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6509	20.792	NaN	23577	30	0	3871.7	0.214	+			36159	SEKVSHVL	8	76	449.7529868067472	897.4914206802944	2	449.7530517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEKVSHVL_	ENSG00000137076|ENST00000314888|TLN1;nc|ENSG00000137076|Q9Y490-2|TLN1	84.9155231211612	0.2928622555056503	2				NaN	NaN	0	NaN	3645	2862	6508
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6510	20.796	NaN	2229.3	30	0	800.65	0.106	+			49435	VVVGGGGVGK	10	35	414.7502364789532	NaN	0	414.75018310546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVVGGGGVGK_	ENSG00000126458|ENST00000246792|RRAS;ENSG00000133818|ENST00000256196|RRAS2;nc|ENSG00000133818|P62070-4|RRAS2	45.9519527083369	0.331194823726099	2				NaN	NaN	0	NaN	3646	2862	6508
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6511	20.798	NaN	4814	30	0	608.03	0.106	+			31174	QGLKLKVS	8	59	436.78158051549235	871.5486080977847	2	436.781494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QGLKLKVS_	RB1CC1|p.E1045G|1|0.37|ENSG00000023287|chr8:52656695-52656695|T/C|missense_variant	66.42927471994793	0.4381325844043345	2				NaN	NaN	0	NaN	3647	2862	6508
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6512	20.8	NaN	5940.1	30	0	538.55	0.106	+			37833	SNANIKISGK	10	69	516.2949062959891	1030.5752596587781	2	516.2960815429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SNANIKISGK_	ENSG00000101425|ENST00000642449|BPI;nc|ENSG00000101425|P17213|BPI	54.722347961057174	0.4138398245444204	2				NaN	NaN	0	NaN	3648	2862	6508
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6513	20.802	NaN	1476.5	30	0	231.59	0.106	+			27652	MPSHPDRAY	9	52	537.2449764551432	1072.4753999770862	2	537.2459716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MPSHPDRAY_	ENSG00000161955|ENST00000338784|TNFSF13;nc|ENSG00000161955|O75888-2|TNFSF13;nc|ENSG00000161955|O75888-3|TNFSF13;nc|ENSG00000161955|O75888-4|TNFSF13;nc|ENSG00000161955|O75888-5|TNFSF13;nc|ENSG00000239697|O43508-2|TNFSF12	44.377184641726394	0.36891676396732553	2				NaN	NaN	0	NaN	3649	2862	6508
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6514	20.803	NaN	2294.5	30	0	1038.3	0.041	+			8453	EARRYVDSRCL	11	37	456.56656549745253	1366.6778670925576	3	456.5663757324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EARRYVDSRCL_	ENSG00000033178|ENST00000322244|UBA6;nc|ENSG00000033178|A0AVT1-2|UBA6	26.063383197487333	0.7164075632144343	2				NaN	NaN	0	NaN	3650	2862	6508
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6515	20.804	NaN	6961.8	30	0	1098.2	0.14	+			38670	SSIREAISK	9	66	495.7819894519389	989.5494259706778	2	495.7825012207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSIREAISK_	ENSG00000196670|ENST00000502412|ZFP62;nc|ENSG00000278970|Q8NB50-2|ZFP62;nc|ENSG00000278970|Q8NB50-3|ZFP62	114.85826248499774	0.024312442104607014	2				NaN	NaN	0	NaN	3651	2862	6508
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6533	20.843	NaN	10784	30	0	3255	0.214			+	44552	TTALTQNL	8	60	431.2371576631218	860.4597623930437	2	431.2371520996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTALTQNL_	REV__nc|ENSG00000246774|Q6ZST2|COL25A1-DT	53.351449002276354	0.5676011784961348	2				NaN	NaN	0	NaN	3666	2865	6532
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6534	20.847	NaN	3983.1	30	0	1932.2	0.106	+			38402	SSAARLARR	9	36	329.8656579922864	NaN	0	329.86572265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSAARLARR_	ENST00000355628.9_1_3:56716933-56717212:-|nuORF	35.61828744233558	0.29773779453147337	2				NaN	NaN	0	NaN	3667	2865	6532
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6535	20.849	NaN	342.07	30	0	57.19	0.106	+			21036	KKKKKKKRGR	10	26	642.9558715820312	NaN	0	642.9558715820312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KKKKKKKRGR_	ENST00000549136.1_1_12:95869884-95877058:+|nuORF;nc|ENSG00000111142|P50579-3|METAP2	0.9968829235231368	0.4201028297492154	2				NaN	NaN	0	NaN	3668	2865	6532
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6536	20.851	NaN	1406.3	30	0	185.03	0.106			+	37092	SISKALGLK	9	50	458.79443359375	NaN	0	458.79443359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SISKALGLK_	REV__ENST00000342992.10_3_2:179410309-179410396:-|nuORF	71.87747018426188	0.0992163553043454	2				NaN	NaN	0	NaN	3669	2865	6532
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6537	20.853	NaN	575.13	30	0	77.649	0.034			+	8034	DTTVGTLAGE	10	31	482.2347106933594	NaN	0	482.2347106933594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DTTVGTLAGE_	REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-10|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-13|TTN;REV__nc|ENSG00000155657|Q8WZ42-2|TTN;REV__nc|ENSG00000155657|Q8WZ42-3|TTN;REV__nc|ENSG00000155657|Q8WZ42-4|TTN;REV__nc|ENSG00000155657|Q8WZ42-5|TTN;REV__nc|ENSG00000155657|Q8WZ42-6|TTN;REV__nc|ENSG00000155657|Q8WZ42-7|TTN;REV__nc|ENSG00000155657|Q8WZ42-8|TTN;REV__nc|ENSG00000155657|Q8WZ42-9|TTN;REV__nc|ENSG00000155657|Q8WZ42|TTN;REV__TTN|p.A12650Gfs*4|1|0.4|ENSG00000155657|chr2:178633489-178633490|-/T|frameshift_variant;REV__TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;REV__TTN|p.A7105Cfs*8|1|0.32|ENSG00000155657|chr2:178722523-178722524|-/A|frameshift_variant;REV__TTN|p.D20259Rfs*40|1|0.44|ENSG00000155657|chr2:178583105-178583106|-/T|frameshift_variant;REV__TTN|p.D21555Ifs*6|1|0.33|ENSG00000155657|chr2:178576659-178576659|G/-|frameshift_variant;REV__TTN|p.D2189Tfs*17|1|0.23|ENSG00000155657|chr2:178775147-178775147|T/-|frameshift_variant;REV__TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;REV__TTN|p.D9026Afs*9|1|0.26|ENSG00000155657|chr2:178711205-178711208|CTGT/-|frameshift_variant;REV__TTN|p.E15132Sfs*22|1|0.27|ENSG00000155657|chr2:178612094-178612094|C/-|frameshift_variant;REV__TTN|p.E20392Dfs*6|1|0.04|ENSG00000155657|chr2:178582357-178582358|-/TTTAAAATTA|frameshift_variant;REV__TTN|p.E20392Kfs*4|1|0.02|ENSG00000155657|chr2:178582359-178582360|-/TTTT|frameshift_variant;REV__TTN|p.E9224Gfs*8|1|0.04|ENSG00000155657|chr2:178709697-178709698|-/TCTTATGATATCTTGAC|frameshift_variant;REV__TTN|p.F18705Lfs*8|1|0.37|ENSG00000155657|chr2:178590687-178590687|A/-|frameshift_variant;REV__TTN|p.G12742Vfs*2|1|0.05|ENSG00000155657|chr2:178632983-178632983|C/-|frameshift_variant;REV__TTN|p.G14712Dfs*11|1|0.37|ENSG00000155657|chr2:178614341-178614341|G/-|frameshift_variant;REV__TTN|p.G19920Afs*12|1|0.42|ENSG00000155657|chr2:178584961-178584961|G/-|frameshift_variant;REV__TTN|p.G22029Efs*22|2|0.13|ENSG00000155657|chr2:178575125-178575125|T/-|frameshift_variant;REV__TTN|p.I10495Nfs*4|1|0.37|ENSG00000155657|chr2:178685288-178685289|-/T|frameshift_variant;REV__TTN|p.I24998Nfs*2|1|0.35|ENSG00000155657|chr2:178566216-178566217|-/T|frameshift_variant;REV__TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;REV__TTN|p.I3592Lfs*36|1|0.25|ENSG00000155657|chr2:178741508-178741508|T/-|frameshift_variant;REV__TTN|p.I9225Cfs*34|1|0.06|ENSG00000155657|chr2:178709695-178709696|-/ATATCCATGAGCA|frameshift_variant;REV__TTN|p.K10923Rfs*104|2|0.23|ENSG00000155657|chr2:178679362-178679362|T/-|frameshift_variant;REV__TTN|p.K11381Nfs*25|1|0.07|ENSG00000155657|chr2:178671133-178671133|T/-|frameshift_variant;REV__TTN|p.K11556Sfs*15|1|0.39|ENSG00000155657|chr2:178652287-178652287|T/-|frameshift_variant;REV__TTN|p.K14271Qfs*5|1|0.02|ENSG00000155657|chr2:178617351-178617352|-/G|frameshift_variant;REV__TTN|p.K26626Nfs*34|1|0.34|ENSG00000155657|chr2:178561331-178561331|T/-|frameshift_variant;REV__TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;REV__TTN|p.K4988Ifs*4|1|0.06|ENSG00000155657|chr2:178733381-178733382|-/GAAAATGATG|frameshift_variant;REV__TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;REV__TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant;REV__TTN|p.L7142*|1|0.06|ENSG00000155657|chr2:178722407-178722411|TCTTA/-|frameshift_variant;REV__TTN|p.M4154Nfs*4|1|0.21|ENSG00000155657|chr2:178739821-178739822|-/T|frameshift_variant;REV__TTN|p.N13487Tfs*49|1|0.34|ENSG00000155657|chr2:178621335-178621335|T/-|frameshift_variant;REV__TTN|p.N15496Ifs*16|1|0.09|ENSG00000155657|chr2:178610116-178610116|T/-|frameshift_variant;REV__TTN|p.N2114Mfs*25|1|0.05|ENSG00000155657|chr2:178775523-178775523|T/-|frameshift_variant;REV__TTN|p.N6458Mfs*74|1|0.44|ENSG00000155657|chr2:178725998-178725998|T/-|frameshift_variant;REV__TTN|p.N7648Tfs*27|1|0.32|ENSG00000155657|chr2:178719598-178719598|T/-|frameshift_variant;REV__TTN|p.N8964Tfs*27|1|0.11|ENSG00000155657|chr2:178711988-178711988|T/-|frameshift_variant;REV__TTN|p.P16126Rfs*3|1|0.25|ENSG00000155657|chr2:178607301-178607302|TG/-|frameshift_variant;REV__TTN|p.P22810Hfs*10|1|0.03|ENSG00000155657|chr2:178572780-178572781|-/AAAT|frameshift_variant;REV__TTN|p.P4036Qfs*14|1|0.19|ENSG00000155657|chr2:178740175-178740175|G/-|frameshift_variant;REV__TTN|p.S2859Qfs*30|1|0.21|ENSG00000155657|chr2:178770127-178770127|G/-|frameshift_variant;REV__TTN|p.S5235Hfs*25|1|0.06|ENSG00000155657|chr2:178732315-178732316|-/ATATATG|frameshift_variant;REV__TTN|p.T4116Sfs*25|1|0.04|ENSG00000155657|chr2:178739937-178739938|-/CTATTATATATGAGGAA|frameshift_variant;REV__TTN|p.V10632Yfs*16|1|0.16|ENSG00000155657|chr2:178683254-178683254|T/-|frameshift_variant;REV__TTN|p.V11008Sfs*13|1|0.33|ENSG00000155657|chr2:178678146-178678147|-/T|frameshift_variant;REV__TTN|p.V11345Ffs*4|1|0.4|ENSG00000155657|chr2:178672044-178672044|T/-|frameshift_variant;REV__TTN|p.V13823*|1|0.28|ENSG00000155657|chr2:178620027-178620027|C/-|frameshift_variant;REV__TTN|p.V1964Wfs*14|1|0.32|ENSG00000155657|chr2:178775975-178775975|T/-|frameshift_variant;REV__TTN|p.V22573Cfs*4|2|0.31|ENSG00000155657|chr2:178573492-178573492|C/-|frameshift_variant;REV__TTN|p.V27442Cfs*4|1|0.05|ENSG00000155657|chr2:178558107-178558108|-/A|frameshift_variant;REV__TTN|p.W5728Mfs*3|1|0.07|ENSG00000155657|chr2:178730267-178730268|-/T|frameshift_variant	20.94693142431847	0.4201028297492154	2				NaN	NaN	0	NaN	3670	2865	6532
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6555	20.89	NaN	18579	30	0	2245.8	0.214	+			28904	NQPDNLFAGGE	11	74	581.2630987824432	NaN	0	581.2628784179688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NQPDNLFAGGE_	NCAN|p.F1177L|1|0.13|ENSG00000130287|chr19:19245351-19245351|C/A|missense_variant	39.252832667884924	0.39048276625972167	2				NaN	NaN	0	NaN	3685	2868	6554
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6556	20.894	NaN	3140.7	30	0	412.74	0.044			+	-1	RCFRDWRCARE	11	51	537.9159488999242	1610.7260172999722	3	537.9170532226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_RC(Carbamidomethyl (C))FRDWRC(Carbamidomethyl (C))ARE_	REV__ENST00000477101.1_1_10:61029838-61056692:-|nuORF	17.16674453292914	0.7901079503840427	2				NaN	NaN	0	NaN	3686	2868	6554
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6592	20.968	NaN	4658.5	30	0	589.31	0.142	+			16038	HAVGIVVNK	9	60	468.7850614792287	935.5555700252575	2	468.7855529785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HAVGIVVNK_	ENSG00000122026|ENST00000311549|RPL21;ENST00000397467.2_1_3:1947466-1947595:+|nuORF;ENST00000469899.2_1_12:66431104-66431491:+|nuORF;ENST00000483765.5_1_13:27827977-27830662:+|nuORF;ENST00000493466.1_1_4:37823021-37823243:+|nuORF	106.41520541750704	0.03265588207292361	2				NaN	NaN	0	NaN	3716	2874	6591
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6610	21.007	NaN	5290	30	0	2533.7	0.214			+	2038	AKRAVADY	8	47	447.2454548567849	892.4763567803698	2	447.2459411621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AKRAVADY_	REV__ENSG00000178764|ENST00000314393|ZHX2;REV__ZHX2|p.K736Sfs*11|1|0.35|ENSG00000178764|chr8:122953713-122953713|A/-|frameshift_variant;REV__ZHX2|p.M716Wfs*31|1|0.71|ENSG00000178764|chr8:122953653-122953653|C/-|frameshift_variant	50.0245360154114	0.5941082100236891	2				NaN	NaN	0	NaN	3731	2877	6609
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6611	21.01	NaN	1316.5	30	0	241.67	0.106	+			26407	LTELDLSH	8	42	464.24273681640625	NaN	0	464.24273681640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LTELDLSH_	ENSG00000174004|ENST00000328557|NRROS	50.0245360154114	1.7418937515398478	2				NaN	NaN	0	NaN	3732	2877	6609
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6612	21.012	NaN	3085.1	30	0	749.04	0.106	+			16762	HLYFAQVV	8	51	488.7685719601163	NaN	0	488.7679138183594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HLYFAQVV_	GPR137|p.N114H|1|0.15|ENSG00000173264|chr11:64286864-64286864|A/C|missense_variant	46.76643321282427	1.7418937515398478	2				NaN	NaN	0	NaN	3733	2877	6609
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6613	21.014	NaN	1196.4	30	0	188.41	0.036				-1	SFVCQIVCV	9	38	527.7563008850516	1053.498048836903	2	527.7578735351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_SFVCQIVC(Carbamidomethyl (C))V_	DOCK1|p.R303C|1|0.45|ENSG00000150760|chr10:127000229-127000229|C/T|missense_variant	29.14955571784316	0.5308295550522326	2				NaN	NaN	0	NaN	3734	2877	6609
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6631	21.051	NaN	7214.1	30	0	2873.4	0.214	+			44573	TTATFAATK	9	61	456.2452121250191	910.4758713168383	2	456.24542236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTATFAATK_	ENSG00000141232|ENST00000499247|TOB1;TOB1|p.F274Yfs*52|1|0.06|ENSG00000141232|chr17:50863197-50863198|-/CATGCAGT|frameshift_variant	117.81106730687013	0.02252488733980868	2				NaN	NaN	0	NaN	3749	2880	6630
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6632	21.054	NaN	2420.3	30	0	424.24	0.034	+			40632	SVAPSPAVDK	10	41	485.7638884677849	969.5132240023698	2	485.76373291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVAPSPAVDK_	ENSG00000126012|ENST00000375401|KDM5C;KDM5C|p.L1399Wfs*5|2|0.16|ENSG00000126012|chrX:53193560-53193560|G/-|frameshift_variant;nc|ENSG00000126012|P41229-2|KDM5C;nc|ENSG00000126012|P41229-3|KDM5C;nc|ENSG00000126012|P41229-4|KDM5C;nc|ENSG00000126012|P41229-5|KDM5C	33.921630207806714	0.6028135429846169	2				NaN	NaN	0	NaN	3750	2880	6630
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6650	21.09	NaN	10627	30	0	752.04	0.214	+			2627	AQIKEHLLK	9	72	540.3321737044946	1078.6497944757891	2	540.3330688476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AQIKEHLLK_	EIF2B5|p.L605Pfs*9|1|0.26|ENSG00000145191|chr3:184143504-184143505|-/C|frameshift_variant;ENSG00000145191|ENST00000648915|EIF2B5;ENST00000481054.5_1_3:183853173-183856676:+|nuORF;ENST00000491144.5_1_3:183853173-183855624:+|nuORF	166.0711670676379	0.003437550387609957	2				NaN	NaN	0	NaN	3765	2883	6649
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6651	21.094	NaN	1686	30	0	754.22	0.106	+			3918	ATASKNIF	8	36	426.2346574119209	NaN	0	426.23468017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATASKNIF_	ENSG00000163564|ENST00000368140|PYHIN1;ENST00000485134.1_1_1:158911778-158914889:+|nuORF;nc|ENSG00000163564|Q6K0P9-2|PYHIN1;nc|ENSG00000163564|Q6K0P9-3|PYHIN1;nc|ENSG00000163564|Q6K0P9-4|PYHIN1;PYHIN1|p.R201H|1|0.42|ENSG00000163564|chr1:158941999-158941999|G/A|missense_variant	29.14955571784316	1.7418937515398478	2				NaN	NaN	0	NaN	3766	2883	6649
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6652	21.096	NaN	1175.9	30	0	124.02	0.045				-1	RNWCCSERWRW	11	41	565.915771484375	NaN	0	565.915771484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_RNWC(Carbamidomethyl (C))C(Carbamidomethyl (C))SERWRW_	SND1|p.A514Qfs*156|1|0.37|ENSG00000197157|chr7:127929195-127929195|A/-|frameshift_variant	6.320883175729509	0.456735970842152	2				NaN	NaN	0	NaN	3767	2883	6649
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6670	21.133	NaN	791.66	30	0	127.22	0.214	+			42489	TANEANPLK	9	29	479.25384521484375	NaN	0	479.25384521484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TANEANPLK_	ENSG00000187325|ENST00000341864|TAF9B	36.446750945000026	0.29355505452396785	2				NaN	NaN	0	NaN	3782	2886	6669
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6671	21.136	NaN	1370.4	30	0	206.88	0.047	+			43601	TILLLPVLILI	11	48	610.9359741210938	NaN	0	610.9359741210938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TILLLPVLILI_	ENSG00000160593|ENST00000356289|JAML;nc|ENSG00000160593|Q86YT9-2|JAML;nc|ENSG00000160593|Q86YT9-4|JAML	6.31265097734313	0.456735970842152	2				NaN	NaN	0	NaN	3783	2886	6669
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6689	21.174	NaN	3403.7	30	0	827.54	0.214	+			50716	YEGKVSSV	8	51	434.72395269475356	867.4333524563071	2	434.7245178222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YEGKVSSV_	ENSG00000198700|ENST00000361565|IPO9	42.86426827375447	0.638539151166014	2				NaN	NaN	0	NaN	3798	2889	6688
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6690	21.177	NaN	1973.4	30	0	529.16	0.033	+			34941	SAAKGVAAY	9	46	419.22682485272173	836.4390967722435	2	419.2272033691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAAKGVAAY_	ENSG00000062822|ENST00000440232|POLD1;ENST00000596648.1_1_19:50918770-50919194:+|nuORF	66.42927471994793	0.16001998865088202	2				NaN	NaN	0	NaN	3799	2889	6688
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6708	21.214	NaN	71591	30	0	20578	0.215				-1	 	0	89	487.7971894222997	973.5798259113994	2	487.79742431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3814	2892	6707
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6709	21.217	NaN	32482	30	0	10718	0.106				-1	 	0	52	399.2346239832391	796.4546950332782	2	399.23504638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3815	2892	6707
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6710	21.22	NaN	60280	30	0	31720	0.038	+			39358	STCNTKLTLK	10	81	389.21249681926815	1164.6156610580044	3	389.2129211425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_STC(Carbamidomethyl (C))NTKLTLK_	ENSG00000169756|ENST00000544547|LIMS1;ENSG00000256671|ENST00000632897|LIMS4;ENSG00000256977|ENST00000480744|LIMS3;nc|ENSG00000169756|P48059-3|LIMS1;nc|ENSG00000169756|P48059-4|LIMS1;nc|ENSG00000169756|P48059-5|LIMS1;nc|ENSG00000169756|P48059|LIMS1	49.46582953369473	0.46192220282894864	2				NaN	NaN	0	NaN	3816	2892	6707
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6728	21.257	NaN	44362	30	0	9686.1	0.209	+			22827	KVGEVIVTK	9	85	486.80773349979944	971.6009140663989	2	486.8079833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVGEVIVTK_	ENSG00000144381|ENST00000388968|HSPD1;ENST00000388967.3_1_3:36809128-36809431:-|nuORF;ENST00000420325.1_1_13:38567761-38567950:-|nuORF;HSPD1|p.G441Vfs*14|1|0.04|ENSG00000144381|chr2:197488385-197488385|C/-|frameshift_variant	162.63603312974413	0.004023911058767669	2				NaN	NaN	0	NaN	3831	2895	6727
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6729	21.261	NaN	3980.3	30	0	780.21	0.106	+			16160	HEAERTEVL	9	58	542.274652801772	1082.534752670344	2	542.2752075195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HEAERTEVL_	CNTROB|p.L713Cfs*27|1|0.4|ENSG00000170037|chr17:7947710-7947710|T/-|frameshift_variant;ENSG00000170037|ENST00000563694|CNTROB;ENST00000571632.5_1_17:7838298-7849136:+|nuORF;nc|ENSG00000170037|Q8N137-2|CNTROB;nc|ENSG00000170037|Q8N137-3|CNTROB;nc|ENSG00000170037|Q8N137-4|CNTROB;nc|ENSG00000170037|Q8N137-5|CNTROB	106.68306549817024	0.032382560583716295	2				NaN	NaN	0	NaN	3832	2895	6727
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6730	21.263	NaN	4054	30	0	1808.5	0.106			+	39494	STFLLCKIP	9	33	341.1976623535156	NaN	0	341.1976623535156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STFLLCKIP_	REV__ENST00000337231.5_1_17:73001140-73001404:+|nuORF	32.81241826257853	0.3119040447479903	2				NaN	NaN	0	NaN	3833	2895	6727
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6731	21.265	NaN	1137.6	30	0	89.905	0.106	+			1293	AESLKAKAL	9	45	465.78369140625	NaN	0	465.78369140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AESLKAKAL_	ENSG00000167595|ENST00000646935|PROSER3;nc|ENSG00000167595|Q2NL68|PROSER3	69.6276240434122	0.10825701912424071	2				NaN	NaN	0	NaN	3834	2895	6727
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6732	21.266	NaN	2741.5	30	0	568	0.106				-1	LMLQLYIQI	9	44	384.2242126464844	NaN	0	384.2242126464844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_LM(Oxidation (M))LQLYIQI_	ENSG00000132975|ENST00000405846|GPR12	40.77816245573522	0.2702456086868081	2				NaN	NaN	0	NaN	3835	2895	6727
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6733	21.268	NaN	3030.4	30	0	362.75	0.035	+			15969	HAIKSGMDM	9	60	495.2301465611176	988.4457401890352	2	495.2305908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HAIKSGMDM_	ENSG00000116984|ENST00000366577|MTR;MTR|p.G1106Wfs*10|1|0.49|ENSG00000116984|chr1:236894464-236894465|-/T|frameshift_variant;MTR|p.T834Nfs*6|1|0.29|ENSG00000116984|chr1:236874751-236874752|-/A|frameshift_variant;nc|ENSG00000116984|Q99707-2|MTR	72.87924865735499	0.12833875048249987	2				NaN	NaN	0	NaN	3836	2895	6727
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6734	21.269	NaN	1178.6	30	0	173.74	0.139	+			31702	QNNLVRLT	8	51	479.2766184344444	956.5386839356888	2	479.27655029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QNNLVRLT_	CCDC65|p.K320N|1|0.26|ENSG00000139537|chr12:48918837-48918837|G/T|missense_variant	25.450171626174864	0.7628259754767981	2				NaN	NaN	0	NaN	3837	2895	6727
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6752	21.308	NaN	8164.7	30	0	1322.7	0.214	+			35770	SEADKIKVA	9	65	480.77117291167497	959.52779289015	2	480.771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEADKIKVA_	ENSG00000178035|ENST00000326739|IMPDH2;ENST00000466147.5_1_3:49062090-49062580:-|nuORF;ENST00000484872.1_1_3:49061926-49062670:-|nuORF	90.60085204095205	0.06317133949006545	2				NaN	NaN	0	NaN	3852	2898	6751
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6753	21.312	NaN	5392.3	30	0	563.45	0.106	+			48568	VTQAPISAR	9	57	471.77136969352307	941.5281864538462	2	471.771728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTQAPISAR_	ENSG00000101407|ENST00000373447|TTI1	58.2462437865262	0.22823408064396822	2				NaN	NaN	0	NaN	3853	2898	6751
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6754	21.314	NaN	3632.2	30	0	1595.8	0.038			+	-1	TAKCSLRLQE	10	34	402.5485534667969	NaN	0	402.5485534667969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_TAKC(Carbamidomethyl (C))SLRLQE_	REV__ENSG00000143341|ENST00000271588|HMCN1;REV__HMCN1|p.S4801Rfs*11|1|0.07|ENSG00000143341|chr1:186145536-186145537|-/AGAATAA|frameshift_variant;REV__nc|ENSG00000143341|Q96RW7-2|HMCN1	31.634271133179894	0.39630454568332174	2				NaN	NaN	0	NaN	3854	2898	6751
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6772	21.349	NaN	19178	30	0	10020	0.147	+			6008	AVMDNKNPTIK	11	67	410.8883269998271	1229.6431515996812	3	410.8883972167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVMDNKNPTIK_	CKAP5|p.K1126Rfs*25|1|0.46|ENSG00000175216|chr11:46767609-46767609|T/-|frameshift_variant;CKAP5|p.V1971Lfs*42|1|0.03|ENSG00000175216|chr11:46744211-46744212|-/TTGAAAAAAAG|frameshift_variant;ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5	68.78561909154949	0.24586362119257035	2				NaN	NaN	0	NaN	3869	2901	6771
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6791	21.39	NaN	3310.6	30	0	559.17	0.214			+	25835	LSDVPLER	8	61	464.758728718808	NaN	0	464.7588195800781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSDVPLER_	REV__ENST00000497639.5_1_10:69644980-69647288:+|nuORF	45.9519527083369	1.7418937515398478	2				NaN	NaN	0	NaN	3885	2904	6790
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6792	21.393	NaN	2172.8	30	0	740.92	0.034	+			25580	LQFSSRGI	8	49	454.25370341495164	NaN	0	454.25390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LQFSSRGI_	ENSG00000007923|ENST00000377577|DNAJC11;nc|ENSG00000007923|Q9NVH1-2|DNAJC11;nc|ENSG00000007923|Q9NVH1-3|DNAJC11	40.5726180659479	1.7418937515398478	2				NaN	NaN	0	NaN	3886	2904	6790
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6810	21.431	NaN	3292.1	30	0	1828.7	0.212			+	-1	DPPHILMRCN	10	41	634.7972477790898	1267.5799426249796	2	634.7980346679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_DPPHILM(Oxidation (M))RC(Carbamidomethyl (C))N_	REV__ENSG00000084676|ENST00000348332|NCOA1;REV__nc|ENSG00000084676|Q15788-2|NCOA1;REV__nc|ENSG00000084676|Q15788-3|NCOA1;REV__NCOA1|p.E742Nfs*12|1|0.21|ENSG00000084676|chr2:24707688-24707688|A/-|frameshift_variant	34.172542307311794	0.6007644933930345	2				NaN	NaN	0	NaN	3901	2907	6809
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6811	21.434	NaN	2232.1	30	0	519.71	0.034	+			41894	SVTTDRIL	8	52	452.75848388671875	NaN	0	452.75848388671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVTTDRIL_	OR10P1|p.V274I|1|0.38|ENSG00000175398|chr12:55637711-55637711|G/A|missense_variant	58.78195531508484	1.7418937515398478	2				NaN	NaN	0	NaN	3902	2907	6809
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6829	21.472	NaN	5511.7	30	0	658.29	0.214	+			12736	GEKVVKTAL	9	62	472.79208926993726	943.5696256066745	2	472.79241943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEKVVKTAL_	ENSG00000133835|ENST00000510025|HSD17B4;ENST00000511186.5_1_5:118788168-118811542:+|nuORF;ENST00000515235.6_1_5:118788237-118827866:+|nuORF;HSD17B4|p.L703Ifs*15|1|0.06|ENSG00000133835|chr5:119536530-119536531|-/GAAAAATA|frameshift_variant;nc|ENSG00000133835|P51659-2|HSD17B4;nc|ENSG00000133835|P51659-3|HSD17B4	109.43880257439609	0.029570636687953285	2				NaN	NaN	0	NaN	3917	2910	6828
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6830	21.475	NaN	42106	30	0	4191.1	0.106	+			34050	RSMEAHNILSK	11	98	429.2272085159196	1284.6597961479588	3	429.2279968261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RSMEAHNILSK_	ENSG00000160075|ENST00000291386|SSU72;ENST00000378725.3_1_1:1480120-1509937:-|nuORF;nc|ENSG00000160075|Q9NP77-2|SSU72;SSU72|p.L82Ffs*8|1|0.34|ENSG00000160075|chr1:1544981-1544982|-/A|frameshift_variant	150.51114518739402	6.966102168539024E-05	2				NaN	NaN	0	NaN	3918	2910	6828
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6831	21.477	NaN	2899.3	30	0	516.62	0.033			+	25791	LSASAVTVAG	10	50	438.24536231153303	874.4761716898661	2	438.2461853027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSASAVTVAG_	REV__RHCG|p.A359V|1|0.62|ENSG00000140519|chr15:89477553-89477553|G/A|missense_variant	56.72105179125745	0.3956618550748046	2				NaN	NaN	0	NaN	3919	2910	6828
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6849	21.515	NaN	10885	30	0	3643.1	0.215	+			18907	IVMETGNTK	9	58	496.75715015675195	991.4997473803039	2	496.7575378417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IVMETGNTK_	ENSG00000171566|ENST00000499023|PLRG1;ENST00000506918.1_1_4:155463230-155466996:-|nuORF;nc|ENSG00000171566|O43660-2|PLRG1	159.27591364854348	0.004707062175358555	2				NaN	NaN	0	NaN	3934	2913	6848
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6850	21.518	NaN	3424.6	30	0	996.38	0.106	+			39854	STLNSCVSK	9	48	469.7337250690408	937.4528972048817	2	469.73394775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STLNSCVSK_	ENSG00000115183|ENST00000263635|TANC1;ENST00000464096.1_1_2:160006874-160007087:+|nuORF;ENST00000465963.1_1_2:160005603-160007087:+|nuORF;TANC1|p.E735Lfs*10|1|0.14|ENSG00000115183|chr2:159178846-159178847|-/TC|frameshift_variant;TANC1|p.E735Sfs*8|1|0.27|ENSG00000115183|chr2:159178847-159178850|TCTC/-|frameshift_variant	50.033510581677724	0.3025703251535696	2				NaN	NaN	0	NaN	3935	2913	6848
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6851	21.52	NaN	868.6	30	0	259.27	0.106			+	27517	MNWVLAVG	8	30	445.2343006180059	NaN	0	445.2339172363281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MNWVLAVG_	REV__ENSG00000077380|ENST00000397119|DYNC1I2;REV__ENSG00000158560|ENST00000447467|DYNC1I1;REV__ENST00000435916.1_1_10:52025510-52026503:+|nuORF;REV__ENST00000479806.1_1_2:172583261-172604396:+|nuORF;REV__nc|ENSG00000077380|Q13409-2|DYNC1I2;REV__nc|ENSG00000077380|Q13409-3|DYNC1I2;REV__nc|ENSG00000077380|Q13409-5|DYNC1I2;REV__nc|ENSG00000077380|Q13409-6|DYNC1I2;REV__nc|ENSG00000077380|Q13409-7|DYNC1I2;REV__nc|ENSG00000158560|O14576-3|DYNC1I1;REV__nc|ENSG00000158560|O14576-4|DYNC1I1;REV__nc|ENSG00000158560|O14576-5|DYNC1I1;REV__nc|ENSG00000158560|O14576|DYNC1I1	28.2542754592877	1.7418937515398478	2				NaN	NaN	0	NaN	3936	2913	6848
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6852	21.522	NaN	304	30	0	63.853	0.047				-1	 	0	23	611.6072387695312	NaN	0	611.6072387695312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3937	2913	6848
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6870	21.56	NaN	7477.9	30	0	1038.5	0.214	+			39241	STAKSLLVK	9	62	473.7993111147244	945.5840692962488	2	473.7999267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STAKSLLVK_	ENSG00000136715|ENST00000643581|SAP130;nc|ENSG00000136715|Q9H0E3-2|SAP130;nc|ENSG00000136715|Q9H0E3-3|SAP130;nc|ENSG00000136715|Q9H0E3|SAP130	78.26377905018397	0.10505600812668463	2				NaN	NaN	0	NaN	3952	2916	6869
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6871	21.563	NaN	8621.9	30	0	953.2	0.106	+			37899	SPAEDKSSF	9	70	484.22163705964556	966.4287211860911	2	484.22198486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SPAEDKSSF_	ENSG00000183779|ENST00000331569|ZNF703	163.1509380574825	0.003936019289634439	2				NaN	NaN	0	NaN	3953	2916	6869
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6872	21.566	NaN	1056.6	30	0	377.12	0.106			+	32676	RAEPHAAG	8	28	404.7058865595045	807.397220185809	2	404.7062683105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RAEPHAAG_	REV__ENST00000359276.8_1_X:16720981-16730725:-|nuORF	29.841539824830324	0.7289191502596711	2				NaN	NaN	0	NaN	3954	2916	6869
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6873	21.567	NaN	4454.8	30	0	1716.1	0.106			+	10394	EVDTLTLSQ	9	63	503.25838456017	1004.50221618714	2	503.2582092285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EVDTLTLSQ_	REV__CON__P02666	49.536043120802724	0.308405419312776	2				NaN	NaN	0	NaN	3955	2916	6869
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6874	21.569	NaN	937.31	30	0	317.24	0.036			+	-1	AFPCHPCCY	9	33	549.2057412721024	NaN	0	549.205810546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_AFPCHPC(Carbamidomethyl (C))CY_	REV__ZNF513|p.R207C|1|0.31|ENSG00000163795|chr2:27378647-27378647|G/A|missense_variant	14.664097394203935	0.38735045005659413	2				NaN	NaN	0	NaN	3956	2916	6869
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6892	21.607	NaN	15609	30	0	2933.4	0.214	+			22987	KVSDINISK	9	67	502.2921913503121	1002.5698297674243	2	502.29248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVSDINISK_	ENSG00000138193|ENST00000371380|PLCE1;PLCE1|p.A1544Pfs*9|1|0.07|ENSG00000138193|chr10:94273681-94273681|A/-|frameshift_variant;PLCE1|p.E2087Gfs*37|1|0.1|ENSG00000138193|chr10:94316672-94316676|AGAAG/-|frameshift_variant;PLCE1|p.P70Dfs*7|1|0.06|ENSG00000138193|chr10:94031253-94031254|-/GA|frameshift_variant;PLCE1|p.P70Lfs*8|1|0.04|ENSG00000138193|chr10:94031254-94031255|-/TAACA|frameshift_variant	141.88618038797316	0.009595182862320563	2				NaN	NaN	0	NaN	3971	2919	6891
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6893	21.61	NaN	14302	30	0	3792.3	0.106	+			882	AEHIESRTL	9	62	528.276951669176	1054.539350405152	2	528.27783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEHIESRTL_	ENSG00000147872|ENST00000276914|PLIN2;PLIN2|p.V348*|1|0.15|ENSG00000147872|chr9:19116520-19116520|C/-|frameshift_variant	88.17693792209575	0.07000514020414955	2				NaN	NaN	0	NaN	3972	2919	6891
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6894	21.612	NaN	2339	30	0	553.59	0.106	+			561	ADGKGVVV	8	39	372.7156400784608	743.4167272237216	2	372.71600341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ADGKGVVV_	ENSG00000108107|ENST00000344063|RPL28;nc|ENSG00000108107|P46779-2|RPL28;nc|ENSG00000108107|P46779-3|RPL28;nc|ENSG00000108107|P46779-4|RPL28;nc|ENSG00000108107|P46779-5|RPL28	73.97473282117947	0.3737790450121076	2				NaN	NaN	0	NaN	3973	2919	6891
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6895	21.614	NaN	8168.3	30	0	2425.7	0.033			+	32815	RAVRLAEA	8	65	443.2667973583981	884.5190417835962	2	443.2666320800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RAVRLAEA_	REV__ENSG00000130299|ENST00000324894|GTPBP3;REV__ENST00000598038.5_1_19:17448347-17452509:+|nuORF;REV__nc|ENSG00000130299|Q969Y2-2|GTPBP3;REV__nc|ENSG00000130299|Q969Y2-3|GTPBP3;REV__nc|ENSG00000130299|Q969Y2-4|GTPBP3	47.91560031466742	0.6071945918984287	2				NaN	NaN	0	NaN	3974	2919	6891
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6913	21.65	NaN	4005.7	30	0	834.77	0.214			+	-1	SATQACLML	9	55	477.2256816169247	952.4368103006494	2	477.2261047363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_SATQACLM(Oxidation (M))L_	REV__DIO3|p.R37M|1|0.39|ENSG00000197406|chr14:101561606-101561606|G/T|missense_variant	37.81151784470057	0.4459294069877048	2				NaN	NaN	0	NaN	3989	2922	6912
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6914	21.654	NaN	2110.6	30	0	199.29	0.106			+	29852	PLDADENKDD	10	51	566.2454034747233	NaN	0	566.5775756835938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PLDADENKDD_	REV__ENSG00000067606|ENST00000378567|PRKCZ;REV__ENST00000479263.5_1_1:2075906-2116445:+|nuORF;REV__ENST00000503672.1_1_1:2077474-2087532:+|nuORF;REV__nc|ENSG00000067606|Q05513-2|PRKCZ;REV__nc|ENSG00000067606|Q05513-3|PRKCZ;REV__PRKCZ|p.S262Afs*10|1|0.39|ENSG00000067606|chr1:2150886-2150886|A/-|frameshift_variant	30.317721548370564	0.4006274431774794	2				NaN	NaN	0	NaN	3990	2922	6912
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6915	21.656	NaN	2203.4	30	0	460.43	0.037			+	-1	VTCPLRLIK	9	42	367.2254333496094	NaN	0	367.2254333496094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_VTC(Carbamidomethyl (C))PLRLIK_	REV__NCBP1|p.L72P|1|0.38|ENSG00000136937|chr9:97641653-97641653|T/C|missense_variant	31.529811441608018	0.3183796599642538	2				NaN	NaN	0	NaN	3991	2922	6912
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6933	21.692	NaN	5507.3	30	0	777.62	0.214	+			8433	EAREEKVVY	9	59	561.7930462582134	1121.5715395832267	2	561.79443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EAREEKVVY_	ENSG00000253276|ENST00000523505|CCDC71L;nc|ENSG00000253276|Q8N9Z2-2|CCDC71L	76.7741389293348	0.11149722112137898	2				NaN	NaN	0	NaN	4006	2925	6932
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6934	21.696	NaN	5499.9	30	0	613.93	0.106	+			16146	HEAEINKL	8	63	477.2562062596135	952.4978595860271	2	477.256591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HEAEINKL_	ENSG00000135968|ENST00000309863|GCC2;GCC2|p.E275K|1|0.35|ENSG00000135968|chr2:108470152-108470152|G/A|missense_variant;GCC2|p.L712Cfs*16|1|0.49|ENSG00000135968|chr2:108471458-108471458|T/-|frameshift_variant	90.36981228632155	0.27635063874291205	2				NaN	NaN	0	NaN	4007	2925	6932
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6935	21.698	NaN	5771	30	0	2664.5	0.106	+			16988	HPSGTALHY	9	50	491.740283849492	981.466014765784	2	491.74127197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HPSGTALHY_	ENSG00000196526|ENST00000420658|AFAP1;ENST00000513842.1_1_4:7765494-7800689:-|nuORF;nc|ENSG00000196526|Q8N556|AFAP1	97.47269410471826	0.04379738608259218	2				NaN	NaN	0	NaN	4008	2925	6932
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6936	21.699	NaN	2856.6	30	0	1457.9	0.04			+	-1	THCDEKLKKIA	11	31	448.2435940233596	1341.708952670279	3	448.2438049316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_THC(Carbamidomethyl (C))DEKLKKIA_	REV__MACC1|p.V696A|1|0.16|ENSG00000183742|chr7:20158274-20158274|A/G|missense_variant	18.531049691330335	0.7837198200183355	2				NaN	NaN	0	NaN	4009	2925	6932
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6954	21.736	NaN	44183	30	0	8043.8	0.214	+			16149	HEAEPVRTL	9	88	526.2794375300292	1050.5443221268583	2	526.2805786132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HEAEPVRTL_	ENSG00000177311|ENST00000321464|ZBTB38	185.54966270084765	0.0007389233275946833	2				NaN	NaN	0	NaN	4024	2928	6953
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6955	21.74	NaN	3839.4	30	0	1215.3	0.034	+			39426	STDSVPISK	9	50	467.24759652543275	932.4806401176655	2	467.24774169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STDSVPISK_	ENSG00000138162|ENST00000369005|TACC2;nc|ENSG00000138162|O95359-1|TACC2;nc|ENSG00000138162|O95359-3|TACC2;nc|ENSG00000138162|O95359-5|TACC2;nc|ENSG00000138162|O95359-6|TACC2;TACC2|p.V2229Cfs*22|1|0.07|ENSG00000138162|chr10:122211108-122211109|-/A|frameshift_variant	115.49404669440601	0.023927554121326553	2				NaN	NaN	0	NaN	4025	2928	6953
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6973	21.776	NaN	1236.8	30	0	82.174	0.214			+	37730	SLTGSLRSSL	10	58	510.787109375	NaN	0	510.787109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLTGSLRSSL_	REV__ENSG00000124104|ENST00000491381|SNX21;REV__nc|ENSG00000124104|Q969T3-2|SNX21;REV__nc|ENSG00000124104|Q969T3-3|SNX21;REV__SNX21|p.P101Hfs*35|1|0.14|ENSG00000124104|chr20:45834966-45834966|C/-|frameshift_variant	45.02220120713402	0.3370728479115332	2				NaN	NaN	0	NaN	4040	2931	6972
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6974	21.78	NaN	1281	30	0	169.15	0.106	+			16803	HPDGKILII	9	59	503.3099365234375	NaN	0	503.3099365234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HPDGKILII_	ENSG00000131473|ENST00000352035|ACLY;ENST00000588547.1_1_17:40060903-40061877:-|nuORF;nc|ENSG00000131473|P53396-2|ACLY	36.446750945000026	0.29355505452396785	2				NaN	NaN	0	NaN	4041	2931	6972
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6975	21.782	NaN	19411	30	0	6632.1	0.034			+	33544	RLEELARG	8	67	472.26909153349055	942.5236301337811	2	472.2693786621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RLEELARG_	REV__ENST00000493335.5_1_22:31489433-31491914:+|nuORF	68.78682469695295	0.41700713582915416	2				NaN	NaN	0	NaN	4042	2931	6972
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6993	21.82	NaN	8695.4	30	0	2393.3	0.214	+			39206	STADGSALVK	10	64	474.7531551932792	947.4917574533584	2	474.75323486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STADGSALVK_	ENSG00000120699|ENST00000389704|EXOSC8;ENST00000464235.5_1_13:37576413-37578626:+|nuORF;ENST00000490537.6_1_13:37574942-37577165:+|nuORF;EXOSC8|p.N162Mfs*9|1|0.25|ENSG00000120699|chr13:37007064-37007064|A/-|frameshift_variant	126.24258497203832	0.01851300475414303	2				NaN	NaN	0	NaN	4057	2934	6992
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6994	21.823	NaN	2812.9	30	0	505.02	0.106	+			17045	HQAAIIIQK	9	66	511.3117379333995	NaN	0	511.3114318847656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HQAAIIIQK_	ASPM|p.I3229Nfs*2|1|0.48|ENSG00000066279|chr1:197090339-197090340|-/T|frameshift_variant;ENSG00000066279|ENST00000367409|ASPM	110.11987700582712	0.00958887139988123	2				NaN	NaN	0	NaN	4058	2934	6992
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6995	21.825	NaN	2504.6	30	0	339.02	0.106	+			43407	TGITLNKP	8	47	422.2503007618518	842.4860485905036	2	422.2501220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TGITLNKP_	ENSG00000144369|ENST00000304698|FAM171B;nc|ENSG00000144369|Q6P995-2|FAM171B	63.30626980617807	0.4690498839812213	2				NaN	NaN	0	NaN	4059	2934	6992
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6996	21.827	NaN	1727	30	0	622.57	0.033			+	46880	VIMRANEA	8	50	452.2378598368506	NaN	0	452.23760986328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VIMRANEA_	REV__CON__A2AB72	33.51558372728122	1.7418937515398478	2				NaN	NaN	0	NaN	4060	2934	6992
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7014	21.865	NaN	39425	30	0	7348.3	0.214				-1	 	0	69	565.9147586563045	1694.7224465691133	3	565.9163208007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4075	2937	7013
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7015	21.868	NaN	5069.3	30	0	802.45	0.106	+			22841	KVIDPVTGK	9	59	478.79209255747037	955.5696321817408	2	478.79254150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVIDPVTGK_	ENSG00000239789|ENST00000285298|MRPS17	99.01295224348159	0.040209060045561164	2				NaN	NaN	0	NaN	4076	2937	7013
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7016	21.87	NaN	1071.1	30	0	192.86	0.036	+			17229	HVITKTMEL	9	32	544.2956702695425	NaN	0	544.2965087890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_HVITKTM(Oxidation (M))EL_	ENSG00000153201|ENST00000283195|RANBP2;RANBP2|p.F3068Lfs*10|1|0.06|ENSG00000153201|chr2:108782692-108782692|T/-|frameshift_variant;RANBP2|p.H3114Sfs*18|1|0.33|ENSG00000153201|chr2:108782827-108782828|-/T|frameshift_variant	58.78195531508484	0.1545138866451181	2				NaN	NaN	0	NaN	4077	2937	7013
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7034	21.908	NaN	2202	30	0	284.32	0.214	+			34549	RVLEAAVAAK	10	54	514.3171810067389	NaN	0	514.3170776367188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVLEAAVAAK_	ENSG00000111361|ENST00000424014|EIF2B1;nc|ENSG00000111361|Q14232-2|EIF2B1	90.14881205920913	0.053304276504439474	2				NaN	NaN	0	NaN	4092	2940	7033
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7035	21.911	NaN	1375.3	30	0	606.99	0.106	+			16878	HPGSSALHY	9	39	484.7324856678029	NaN	0	484.7325744628906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HPGSSALHY_	ENSG00000060982|ENST00000261192|BCAT1;ENST00000544418.1_1_12:24987681-25055019:-|nuORF;nc|ENSG00000060982|P54687-2|BCAT1;nc|ENSG00000060982|P54687-3|BCAT1;nc|ENSG00000060982|P54687-4|BCAT1;nc|ENSG00000060982|P54687-5|BCAT1	31.954861631926434	0.3162336699109506	2				NaN	NaN	0	NaN	4093	2940	7033
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7036	21.914	NaN	1047	30	0	356.79	0.106	+			48959	VVGAVGVGK	9	26	393.24763408821553	NaN	0	393.2475891113281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVGAVGVGK_	KRAS|p.G12V|32|0.43|ENSG00000133703|chr12:25245350-25245350|C/A|missense_variant;NRAS|p.G12V|1|0.52|ENSG00000213281|chr1:114716126-114716126|C/A|missense_variant	31.954861631926434	0.3162336699109506	2				NaN	NaN	0	NaN	4094	2940	7033
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7037	21.915	NaN	648.32	30	0	201.22	0.106			+	-1	MSCTFPKKG	9	31	507.7410131237772	1013.4674733143544	2	507.2669372558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_M(Oxidation (M))SCTFPKKG_	REV__ENSG00000180532|ENST00000318203|ZSCAN4	26.69291269510374	0.5537881896960711	2				NaN	NaN	0	NaN	4095	2940	7033
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7038	21.917	NaN	845.93	30	0	85.503	0.106				-1	MRRRTCCWRCW	11	47	581.925537109375	NaN	0	581.925537109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	3 Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))RRRTC(Carbamidomethyl (C))C(Carbamidomethyl (C))WRC(Carbamidomethyl (C))W_	ENST00000375224.1_1_1:19430583-19430625:-|nuORF	6.001044225922587	0.456735970842152	2				NaN	NaN	0	NaN	4096	2940	7033
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7039	21.919	NaN	4181.1	30	0	543.73	0.04	+			41613	SVQKQMKILQK	11	72	444.26684996938013	1329.7787205083405	3	444.2667236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVQKQMKILQK_	ENSG00000086712|ENST00000380122|TXLNG;nc|ENSG00000086712|Q9NUQ3-2|TXLNG	63.69406221917213	0.2904805327065929	2				NaN	NaN	0	NaN	4097	2940	7033
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7040	21.92	NaN	1218.5	30	0	402.82	0.148				-1	LSRRCRCRCHC	11	27	782.3526611328125	NaN	0	782.3526611328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	3 Carbamidomethyl (C)	_LSRRC(Carbamidomethyl (C))RC(Carbamidomethyl (C))RC(Carbamidomethyl (C))HC_	ENST00000358901.10_1_9:35072401-35072665:-|nuORF	4.905733101427522	0.456735970842152	2				NaN	NaN	0	NaN	4098	2940	7033
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7060	21.958	NaN	4045.6	30	0	915.33	0.214	+			34267	RTIDRSVFK	9	45	374.5520392609043	1120.634288382913	3	374.5523376464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTIDRSVFK_	ENSG00000113569|ENST00000231498|NUP155;ENST00000507233.1_1_5:37342606-37350289:-|nuORF;nc|ENSG00000113569|O75694-2|NUP155;NUP155|p.N477Tfs*7|1|0.25|ENSG00000113569|chr5:37333551-37333551|T/-|frameshift_variant	46.45678178249821	0.34452392205506005	2				NaN	NaN	0	NaN	4115	2943	7059
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7061	21.961	NaN	10854	30	0	1675	0.046				-1	 	0	64	589.5940330980438	1765.7602698943315	3	589.5947875976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4116	2943	7059
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7074	21.989	NaN	9439.4	30	0	1629.9	0.143	+			16426	HESDVKIVA	9	69	499.2690293127328	996.5235056922656	2	499.2695617675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HESDVKIVA_	ENSG00000165238|ENST00000427277|WNK2;nc|ENSG00000165238|Q9Y3S1-2|WNK2;nc|ENSG00000165238|Q9Y3S1-3|WNK2;nc|ENSG00000165238|Q9Y3S1-4|WNK2;nc|ENSG00000165238|Q9Y3S1|WNK2;WNK2|p.S1424Pfs*5|1|0.34|ENSG00000165238|chr9:93288908-93288908|C/-|frameshift_variant;WNK2|p.T1980Lfs*12|2|0.16|ENSG00000165238|chr9:93297965-93297965|C/-|frameshift_variant	104.01359247289065	0.03510646158778409	2				NaN	NaN	0	NaN	4126	2946	7073
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7092	22.027	NaN	4822	30	0	1050.3	0.214				-1	AVFSSNGLMLK	11	40	394.87902792244114	1181.6152543675234	3	394.8792419433594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_AVFSSNGLM(Oxidation (M))LK_	ENSG00000218336|ENST00000511685|TENM3	38.753607047826485	0.5749975102143227	2				NaN	NaN	0	NaN	4141	2949	7091
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7093	22.031	NaN	3009.8	30	0	782.61	0.106	+			16020	HASVAMRAM	9	46	487.2387348047877	972.4629166763755	2	487.23858642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HASVAMRAM_	ENSG00000102317|ENST00000376759|RBM3;ENST00000466764.5_1_X:48433568-48434262:+|nuORF;ENST00000488216.5_1_X:48433568-48434199:+|nuORF;ENST00000491240.5_1_X:48433911-48434199:+|nuORF	104.74654710444128	0.034358562718640136	2				NaN	NaN	0	NaN	4142	2949	7091
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7094	22.033	NaN	678.92	30	0	111.66	0.106			+	28332	NEGKQLPE	8	38	457.7322082519531	NaN	0	457.7322082519531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NEGKQLPE_	REV__ENSG00000085982|ENST00000678225|USP40;REV__nc|ENSG00000085982|Q9NVE5-3|USP40;REV__nc|ENSG00000085982|Q9NVE5|USP40	67.49366992349736	1.7418937515398478	2				NaN	NaN	0	NaN	4143	2949	7091
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7095	22.035	NaN	795.68	30	0	284.3	0.033	+			47328	VPAKSDVY	8	29	439.73404390347673	877.4535348737535	2	439.73388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VPAKSDVY_	ENSG00000197746|ENST00000394936|PSAP;nc|ENSG00000197746|P07602-2|PSAP;nc|ENSG00000197746|P07602-3|PSAP;PSAP|p.N426Tfs*37|1|0.2|ENSG00000197746|chr10:71819538-71819538|T/-|frameshift_variant	40.77816245573522	0.6514838689002179	2				NaN	NaN	0	NaN	4144	2949	7091
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7113	22.071	NaN	13510	30	0	4228.3	0.214	+			20865	KIMKDILEKK	10	84	415.9245188610021	1244.7517271832064	3	415.9251403808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KIMKDILEKK_	ENSG00000080824|ENST00000216281|HSP90AA1;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1	118.23318122614258	0.029825105341188273	2				NaN	NaN	0	NaN	4159	2952	7112
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7114	22.075	NaN	5108	30	0	1790.5	0.106			+	24966	LLATFLAP	8	47	423.25855587172674	NaN	0	423.2585754394531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LLATFLAP_	REV__nc|ENSG00000155629|Q6ZUJ8-3|PIK3AP1	77.94384346573518	1.7418937515398478	2				NaN	NaN	0	NaN	4160	2952	7112
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7115	22.077	NaN	1666.1	30	0	219.36	0.106	+			13019	GEVKVTKL	8	56	437.2744467093124	NaN	0	437.2744445800781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEVKVTKL_	ENSG00000083857|ENST00000441802|FAT1;FAT1|p.N3847Yfs*7|1|0.03|ENSG00000083857|chr4:186601370-186601371|-/TTATA|frameshift_variant;FAT1|p.P4313Lfs*36|1|0.34|ENSG00000083857|chr4:186596602-186596602|G/-|frameshift_variant	44.377184641726394	1.7418937515398478	2				NaN	NaN	0	NaN	4161	2952	7112
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7116	22.078	NaN	10170	30	0	1633.9	0.036	+			34285	RTLDSVLKK	9	64	353.8887100656493	1058.644300797148	3	353.8889465332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RTLDSVLKK_	ENSG00000174197|ENST00000703841|MGA;MGA|p.D2578Rfs*45|1|0.32|ENSG00000174197|chr15:41762342-41762343|-/A|frameshift_variant;MGA|p.E1249Rfs*25|2|0.28|ENSG00000174197|chr15:41729243-41729244|-/A|frameshift_variant;MGA|p.E1249Rfs*42|1|0.17|ENSG00000174197|chr15:41729244-41729244|A/-|frameshift_variant;MGA|p.L1297Wfs*39|1|0.3|ENSG00000174197|chr15:41734566-41734566|C/-|frameshift_variant;MGA|p.S2228Kfs*5|1|0.33|ENSG00000174197|chr15:41750284-41750285|-/A|frameshift_variant;MGA|p.T1916Qfs*7|1|0.4|ENSG00000174197|chr15:41749350-41749350|A/-|frameshift_variant;nc|ENSG00000174197|Q8IWI9-3|MGA;nc|ENSG00000174197|Q8IWI9|MGA	63.69406221917213	0.18282083575345315	2				NaN	NaN	0	NaN	4162	2952	7112
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7134	22.115	NaN	5418.9	30	0	676.89	0.214	+			15829	GWCSVNRYDWR	11	58	481.22125244140625	NaN	0	481.22125244140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GWCSVNRYDWR_	sp|P08546|DPOL_HCMVADNApolymerasecatalyticsubunitOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL54PE=1SV=2;sp|Q6SW77|DPOL_HCMVMDNApolymerasecatalyticsubunitOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL54PE=3SV=1	39.873155843976775	0.387718248623866	2				NaN	NaN	0	NaN	4177	2955	7133
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7135	22.119	NaN	5905.7	30	0	1478.4	0.106				-1	 	0	52	409.21493945055147	816.415325967903	2	409.2151184082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4178	2955	7133
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7136	22.121	NaN	586.39	30	0	101.53	0.106	+			19313	KAGPVAIMK	9	44	457.7779541015625	NaN	0	457.7779541015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KAGPVAIMK_	ENSG00000176273|ENST00000427197|SLC35G1;nc|ENSG00000176273|Q2M3R5-2|SLC35G1	42.396135135203025	0.2590952873412954	2				NaN	NaN	0	NaN	4179	2955	7133
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7137	22.123	NaN	576	30	0	94.931	0.045	+			33194	REWRCFQWWRM	11	31	561.9303588867188	NaN	0	561.9303588867188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_REWRCFQWWRM_	ENST00000430334.7_1_17:43555485-43568071:-|nuORF;ENST00000582986.5_1_17:62801160-62833227:-|nuORF	0.37141330420238305	0.456735970842152	2				NaN	NaN	0	NaN	4180	2955	7133
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7155	22.158	NaN	54391	30	0	7353	0.214				-1	 	0	87	571.9181461863843	1712.7326091593527	3	571.9189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4195	2958	7154
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7156	22.162	NaN	33919	30	0	18839	0.106				-1	 	0	67	543.2550748134994	1084.4955966937987	2	543.2567749023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4196	2958	7154
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7157	22.164	NaN	3995.8	30	0	1209.8	0.106	+			4754	ATMQSKLIQK	10	41	383.2215576171875	NaN	0	383.2215576171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATMQSKLIQK_	ENSG00000179603|ENST00000339582|GRM8;ENST00000341617.7_1_7:126079175-126341814:-|nuORF;nc|ENSG00000179603|O00222-2|GRM8	65.15724298150197	0.19216335879263718	2				NaN	NaN	0	NaN	4197	2958	7154
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7158	22.166	NaN	3365.8	30	0	659.87	0.106	+			35619	SCCPVGCAK	9	51	434.17932623334906	866.3440995334981	2	434.1794738769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SCCPVGCAK_	CON__P67983;ENSG00000125144|ENST00000379811|MT1G;ENSG00000125148|ENST00000245185|MT2A;ENSG00000169688|ENST00000334346|MT1B;ENSG00000187193|ENST00000394485|MT1X;ENSG00000205364|ENST00000379818|MT1M;ENST00000330439.6_1_16:56660742-56660880:+|nuORF;ENST00000562017.1_1_16:56643131-56643263:+|nuORF;ENST00000563985.1_1_16:56642884-56643263:+|nuORF;ENST00000567300.1_1_16:56642646-56643263:+|nuORF;nc|ENSG00000125144|P13640-2|MT1G;nc|ENSG00000169715|P04732|MT1E	51.33545320467046	0.2872990594074956	2				NaN	NaN	0	NaN	4198	2958	7154
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7159	22.168	NaN	21451	30	0	13450	0.106	+			2364	ANCHLIRSYQ	10	53	402.20070734235117	1203.5802926272536	3	402.5357360839844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ANCHLIRSYQ_	ENST00000392861.6_1_2:145274916-145275705:-|nuORF;ENST00000435831.5_1_2:145274916-145275300:-|nuORF	34.172542307311794	0.6007644933930345	2				NaN	NaN	0	NaN	4199	2958	7154
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7160	22.169	NaN	11067	30	0	3354.4	0.106	+			44669	TTGQVVAMK	9	63	467.7542223063379	933.4938916794758	2	467.7544860839844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TTGQVVAMK_	ENSG00000170312|ENST00000395284|CDK1;ENST00000475504.6_1_10:62539923-62545554:+|nuORF;nc|ENSG00000170312|P06493-2|CDK1	159.27591364854348	0.004707062175358555	2				NaN	NaN	0	NaN	4200	2958	7154
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7161	22.171	NaN	1586.5	30	0	406.72	0.033	+			44545	TTAAVLQGK	9	53	444.76291364185437	NaN	0	444.7604675292969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TTAAVLQGK_	ENSG00000127603|ENST00000564288|MACF1;ENST00000476350.1_1_1:39768622-39838291:+|nuORF;MACF1|p.A5223Lfs*8|1|0.21|ENSG00000127603|chr1:39388486-39388486|G/-|frameshift_variant;MACF1|p.N4824Kfs*19|1|0.33|ENSG00000127603|chr1:39387292-39387293|-/A|frameshift_variant;MACF1|p.T4896Lfs*29|1|0.27|ENSG00000127603|chr1:39387507-39387507|A/-|frameshift_variant;nc|ENSG00000127603|Q9UPN3-2|MACF1;nc|ENSG00000127603|Q9UPN3-3|MACF1;nc|ENSG00000127603|Q9UPN3-4|MACF1;nc|ENSG00000127603|Q9UPN3-5|MACF1;nc|ENSG00000127603|Q9UPN3|MACF1	58.78195531508484	0.1545138866451181	2				NaN	NaN	0	NaN	4201	2958	7154
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7179	22.207	NaN	2636.8	30	0	667.34	0.214	+			5773	AVGPKVALK	9	52	441.7919868254387	881.5694207176774	2	441.7917175292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVGPKVALK_	ENSG00000151651|ENST00000445355|ADAM8;ENST00000559018.1_1_10:135076662-135077335:-|nuORF;nc|ENSG00000151651|P78325-2|ADAM8	79.45101966838831	0.09992237243120712	2				NaN	NaN	0	NaN	4216	2961	7178
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7180	22.21	NaN	1374	30	0	249.39	0.035	+			10016	ERRPVLPQ	8	52	497.7927327044637	993.5709124757274	2	497.7937927246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ERRPVLPQ_	ENST00000548796.1_1_14:105857553-105859601:+|nuORF;ENST00000551801.1_1_14:105857872-105861006:+|nuORF	47.91560031466742	0.6071945918984287	2				NaN	NaN	0	NaN	4217	2961	7178
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7198	22.248	NaN	45048	30	0	13496	0.215	+			3925	ATASPIVAR	9	92	443.2611589842785	884.507765035357	2	443.26104736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATASPIVAR_	ENSG00000131725|ENST00000254029|WDR44;nc|ENSG00000131725|Q5JSH3-2|WDR44;nc|ENSG00000131725|Q5JSH3-4|WDR44;WDR44|p.N542Mfs*11|2|0.39|ENSG00000131725|chrX:118409575-118409575|A/-|frameshift_variant	136.26810882979174	0.012230845423532208	2				NaN	NaN	0	NaN	4232	2964	7197
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7199	22.251	NaN	5278.6	30	0	1146.6	0.106	+			2612	AQHSIFADK	9	58	508.7611050005641	1015.5076570679282	2	508.76123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AQHSIFADK_	ENST00000468531.1_1_1:32385166-32408168:-|nuORF;ENST00000526960.1_1_1:32385166-32410235:-|nuORF;ENST00000529477.5_1_1:32385166-32403656:-|nuORF	53.59686742100583	0.26699147868981316	2				NaN	NaN	0	NaN	4233	2964	7197
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7200	22.253	NaN	828.67	30	0	85.286	0.106	+			50622	YEAKCVKV	8	40	470.25179065581375	NaN	0	470.2521057128906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YEAKCVKV_	ENSG00000185787|ENST00000426013|MORF4L1;ENST00000557961.5_1_15:79165359-79178570:+|nuORF;ENST00000558522.5_1_15:79165359-79183469:+|nuORF;ENST00000558539.5_1_15:79170271-79178570:+|nuORF;ENST00000558893.5_1_15:79165359-79184661:+|nuORF;ENST00000559619.5_1_15:79165359-79179692:+|nuORF;ENST00000561171.5_1_15:79170562-79187198:+|nuORF;nc|ENSG00000185787|Q9UBU8|MORF4L1	37.15910966729921	1.7418937515398478	2				NaN	NaN	0	NaN	4234	2964	7197
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7201	22.255	NaN	1217.2	30	0	98.774	0.033	+			33535	RLASSVLR	8	49	451.28254727262174	900.5505416120435	2	451.2823486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RLASSVLR_	chr17:39202445-39202994|380|13.56|0.73|4.21|+|ENST00000678012|RPL19,RPL19;ENSG00000108298|ENST00000225430|RPL19;ENST00000580333.1_1_17:37356597-37358721:+|nuORF	52.936696900407355	0.5717071646657654	2				NaN	NaN	0	NaN	4235	2964	7197
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7219	22.293	NaN	9360.9	30	0	3235.2	0.214	+			16789	HPASDKIEAY	10	72	565.7769698490389	1129.5393867648777	2	565.7777709960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HPASDKIEAY_	DSP|p.Y787Lfs*2|1|0.17|ENSG00000096696|chr6:7574715-7574716|-/T|frameshift_variant;ENSG00000096696|ENST00000379802|DSP;nc|ENSG00000096696|P15924-2|DSP;nc|ENSG00000096696|P15924-3|DSP	63.53385203322761	0.33370026130094593	2				NaN	NaN	0	NaN	4250	2967	7218
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7220	22.296	NaN	1296.7	30	0	393.82	0.039			+	7479	DGAVVWPRLLE	11	28	418.9002990722656	NaN	0	418.9002990722656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DGAVVWPRLLE_	REV__ENST00000288532.10_1_12:120966855-120966963:-|nuORF	19.262678746197807	0.456735970842152	2				NaN	NaN	0	NaN	4251	2967	7218
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7238	22.333	NaN	4854.5	30	0	1193.6	0.214	+			5116	ATSRTYLYR	9	40	377.53662109375	NaN	0	377.53662109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSRTYLYR_	ENSG00000169972|ENST00000379031|PUSL1;ENST00000463758.1_1_1:1244702-1244984:+|nuORF;ENST00000470520.5_1_1:1244480-1246298:+|nuORF;ENST00000493657.1_1_1:1244633-1244984:+|nuORF;PUSL1|p.E212Rfs*26|1|0.16|ENSG00000169972|chr1:1309836-1309836|C/-|frameshift_variant	42.396135135203025	0.2590952873412954	2				NaN	NaN	0	NaN	4266	2970	7237
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7239	22.337	NaN	1604.6	30	0	356.31	0.106				-1	ICISLWAM	8	46	505.2459716796875	NaN	0	505.2459716796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_IC(Carbamidomethyl (C))ISLWAM(Oxidation (M))_	ENST00000560820.1_1_15:48729911-48737600:-|nuORF	37.028477286268924	1.7418937515398478	2				NaN	NaN	0	NaN	4267	2970	7237
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7240	22.339	NaN	906.2	30	0	213.29	0.106	+			23961	LDSTMFSKG	9	39	493.238138941896	984.461724950592	2	493.23846435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LDSTMFSKG_	ENSG00000135436|ENST00000257894|FAM186B;ENST00000533372.1_1_12:49976813-49999059:-|nuORF;nc|ENSG00000135436|Q8IYM0-2|FAM186B	40.77816245573522	0.41113185337114944	2				NaN	NaN	0	NaN	4268	2970	7237
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7241	22.34	NaN	923.25	30	0	214.42	0.106				-1	MRKTNIKMK	9	26	389.22137451171875	NaN	0	389.22137451171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_M(Oxidation (M))RKTNIKMK_	ENST00000413436.5_1_2:70278436-70314922:-|nuORF;ENST00000423402.5_1_2:70310792-70314961:-|nuORF;ENST00000596028.5_1_2:70310792-70315777:-|nuORF	18.262085536374414	0.37517301184500873	2				NaN	NaN	0	NaN	4269	2970	7237
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7242	22.342	NaN	843.07	30	0	109.86	0.106			+	43750	TLEPLART	8	38	450.7607311748662	899.5069094165324	2	450.7610168457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TLEPLART_	REV__ENSG00000173801|ENST00000393931|JUP	35.61828744233558	0.6843154725607303	2				NaN	NaN	0	NaN	4270	2970	7237
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7243	22.344	NaN	931	30	0	219.18	0.106			+	-1	WGEWMMRERER	11	29	791.3570556640625	NaN	0	791.3570556640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_WGEWM(Oxidation (M))MRERER_	REV__ENST00000563908.1_1_15:72647792-72668286:-|nuORF;REV__ENST00000568777.5_1_15:72647792-72649010:-|nuORF	8.235088202721068	0.456735970842152	2				NaN	NaN	0	NaN	4271	2970	7237
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7244	22.346	NaN	530.89	30	0	140.33	0.034			+	37329	SLEEQLSK	8	31	467.2480773925781	NaN	0	467.2480773925781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SLEEQLSK_	REV__ENSG00000173230|ENST00000614479|GOLGB1;REV__GOLGB1|p.D2495Tfs*21|1|0.22|ENSG00000173230|chr3:121691867-121691867|T/-|frameshift_variant;REV__GOLGB1|p.K2450Rfs*27|1|0.37|ENSG00000173230|chr3:121692000-121692000|T/-|frameshift_variant;REV__GOLGB1|p.Q2186Sfs*19|1|0.31|ENSG00000173230|chr3:121693952-121693952|G/-|frameshift_variant;REV__nc|ENSG00000173230|Q14789-2|GOLGB1;REV__nc|ENSG00000173230|Q14789-3|GOLGB1;REV__nc|ENSG00000173230|Q14789-4|GOLGB1;REV__nc|ENSG00000173230|Q14789|GOLGB1	30.503639358989545	1.7418937515398478	2				NaN	NaN	0	NaN	4272	2970	7237
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7262	22.381	NaN	45104	30	0	27259	0.215				-1	 	0	70	356.8568535561453	1067.548731268636	3	356.85711669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4287	2973	7261
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7263	22.384	NaN	2989.8	30	0	456.37	0.106	+			19960	KEGKIVPV	8	52	435.2761961730514	868.5378394129028	2	435.27606201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEGKIVPV_	ENSG00000162368|ENST00000371873|CMPK1;ENST00000371870.3_1_1:47799617-47838812:+|nuORF;nc|ENSG00000162368|P30085|CMPK1	76.84663266511073	0.3498490246073164	2				NaN	NaN	0	NaN	4288	2973	7261
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7264	22.386	NaN	1531.5	30	0	124.84	0.106	+			12735	GEKVSKVSL	9	53	473.7809833216351	945.5474137100703	2	473.7814636230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEKVSKVSL_	ENSG00000137177|ENST00000259711|KIF13A;KIF13A|p.K775Nfs*30|1|0.35|ENSG00000137177|chr6:17804490-17804490|T/-|frameshift_variant;KIF13A|p.V1116Sfs*23|1|0.39|ENSG00000137177|chr6:17787792-17787792|T/-|frameshift_variant;KIF13A|p.V1116Sfs*4|2|0.23|ENSG00000137177|chr6:17787791-17787792|-/T|frameshift_variant;nc|ENSG00000137177|Q9H1H9-2|KIF13A;nc|ENSG00000137177|Q9H1H9-3|KIF13A;nc|ENSG00000137177|Q9H1H9-4|KIF13A	78.26377905018397	0.10505600812668463	2				NaN	NaN	0	NaN	4289	2973	7261
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7265	22.388	NaN	1824.9	30	0	306.21	0.036			+	32939	REAPLPERS	9	60	527.7853786629491	1053.5562043926982	2	527.7858276367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_REAPLPERS_	REV__ENST00000398998.1_2_21:38610885-38639768:-|nuORF	72.87924865735499	0.12833875048249987	2				NaN	NaN	0	NaN	4290	2973	7261
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7283	22.425	NaN	1646.6	30	0	283.43	0.214	+			27670	MPTGGGKSL	9	43	424.2203298637299	NaN	0	424.220703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MPTGGGKSL_	BLM|p.G1220Pfs*25|1|0.09|ENSG00000197299|chr15:90804264-90804265|-/ACCTTTA|frameshift_variant;BLM|p.K1217Nfs*62|2|0.42|ENSG00000197299|chr15:90804254-90804254|A/-|frameshift_variant;ENSG00000004700|ENST00000444129|RECQL;ENSG00000197299|ENST00000355112|BLM	47.95952297671804	0.22075498469600283	2				NaN	NaN	0	NaN	4305	2976	7282
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7284	22.428	NaN	748.19	30	0	75.207	0.106	+			35003	SAAVQKAI	8	32	394.2374267578125	NaN	0	394.2374267578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAAVQKAI_	ENSG00000117226|ENST00000370481|GBP3;ENSG00000117228|ENST00000370473|GBP1;ENSG00000154451|ENST00000370459|GBP5;ENST00000394662.2_1_1:89887573-89889825:+|nuORF;ENST00000481145.1_1_1:89729385-89732242:-|nuORF;GBP1|p.K391Sfs*28|1|0.19|ENSG00000117228|chr1:89056212-89056212|T/-|frameshift_variant;GBP3|p.E321D|1|0.3|ENSG00000117226|chr1:89011933-89011933|C/A|missense_variant;GBP3|p.G430Afs*34|1|0.37|ENSG00000117226|chr1:89010977-89010977|C/-|frameshift_variant;nc|ENSG00000117226|Q9H0R5-4|GBP3;nc|ENSG00000154451|Q96PP8-2|GBP5	40.77816245573522	1.7418937515398478	2				NaN	NaN	0	NaN	4306	2976	7282
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7285	22.43	NaN	227.64	30	0	43.746	0.106			+	9556	ELETPPKP	8	15	455.74761962890625	NaN	0	455.74761962890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ELETPPKP_	REV__ENSG00000104881|ENST00000360957|PPP1R13L;REV__PPP1R13L|p.P562Afs*10|1|0.56|ENSG00000104881|chr19:45392011-45392012|-/C|frameshift_variant	24.20275056022122	1.7418937515398478	2				NaN	NaN	0	NaN	4307	2976	7282
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7286	22.432	NaN	2423.5	30	0	442.59	0.106	+			16442	HESPAVKL	8	52	440.7476634998084	NaN	0	440.7479248046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HESPAVKL_	ENSG00000097046|ENST00000234626|CDC7	66.42927471994793	1.7418937515398478	2				NaN	NaN	0	NaN	4308	2976	7282
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7287	22.434	NaN	1734.6	30	0	374.16	0.106	+			20866	KIMKDILEKK	10	49	415.9245188610021	1244.7517271832064	3	415.92486572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KIMKDILEKK_	ENSG00000080824|ENST00000216281|HSP90AA1;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1	68.62578634547417	0.2885473079336931	2				NaN	NaN	0	NaN	4309	2976	7282
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7288	22.436	NaN	195.8	30	0	40.111	0.037				-1	GRCVVMVGMP	10	14	561.2653198242188	NaN	0	561.2653198242188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),Oxidation (M)	_GRC(Carbamidomethyl (C))VVMVGM(Oxidation (M))P_	ENSG00000013573|ENST00000542838|DDX11;ENST00000435753.6_1_12:31250908-31256767:+|nuORF;ENST00000536265.5_1_12:31242773-31256767:+|nuORF;ENST00000537136.1_1_12:31255149-31256026:+|nuORF;nc|ENSG00000013573|Q96FC9-3|DDX11;nc|ENSG00000013573|Q96FC9-4|DDX11;nc|ENSG00000013573|Q96FC9|DDX11;nc|ENSG00000214826|Q92771|DDX12P;nc|ENSG00000256263|A8MPP1|DDX11L8	7.193352174278301	0.4201028297492154	2				NaN	NaN	0	NaN	4310	2976	7282
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7306	22.473	NaN	7004.2	30	0	1518.7	0.142	+			51314	YSHTGRII	8	60	473.7587495333603	945.5029461335206	2	473.7589111328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YSHTGRII_	ENSG00000113719|ENST00000393784|ERGIC1;nc|ENSG00000113719|Q969X5-2|ERGIC1	60.11826168202944	0.5006107059937851	2				NaN	NaN	0	NaN	4325	2979	7305
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7324	22.512	NaN	4548.7	30	0	1409.1	0.214	+			39628	STIDPAVSK	9	46	459.2503369378464	916.4861209424928	2	459.25067138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STIDPAVSK_	ENSG00000106049|ENST00000265395|HIBADH;ENST00000428288.2_1_7:27565835-27702463:-|nuORF	58.22992032128504	0.22837015374068087	2				NaN	NaN	0	NaN	4340	2982	7323
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7325	22.515	NaN	1772.9	30	0	263.9	0.106				-1	 	0	50	571.9181461863843	1712.7326091593527	3	572.254150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4341	2982	7323
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7326	22.517	NaN	3646	30	0	470.57	0.106	+			16289	HEGTLVHAV	9	57	481.75665275243693	961.4987525716739	2	482.2850036621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HEGTLVHAV_	ENSG00000089154|ENST00000300648|GCN1	53.351449002276354	0.2690372970092375	2				NaN	NaN	0	NaN	4342	2982	7323
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7327	22.519	NaN	954.68	30	0	182.56	0.106				-1	 	0	33	409.21493945055147	816.415325967903	2	409.2151794433594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4343	2982	7323
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7328	22.521	NaN	972.06	30	0	175.82	0.035	+			24057	LEHVLSQSI	9	35	513.2853379601738	NaN	0	513.2852783203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LEHVLSQSI_	ENSG00000144426|ENST00000683969|NBEAL1;NBEAL1|p.F1670Lfs*25|1|0.21|ENSG00000144426|chr2:203144843-203144843|T/-|frameshift_variant;NBEAL1|p.F2315Lfs*2|1|0.17|ENSG00000144426|chr2:203193900-203193900|T/-|frameshift_variant;NBEAL1|p.K2562Rfs*15|1|0.41|ENSG00000144426|chr2:203209306-203209306|A/-|frameshift_variant;NBEAL1|p.N2072Kfs*10|1|0.35|ENSG00000144426|chr2:203172825-203172826|-/A|frameshift_variant;nc|ENSG00000144426|Q6ZS30-1|NBEAL1;nc|ENSG00000144426|Q6ZS30|NBEAL1	52.936696900407355	0.1864545979552969	2				NaN	NaN	0	NaN	4344	2982	7323
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7346	22.559	NaN	5649.4	30	0	1258.5	0.214	+			16290	HEGTLVHAV	9	54	481.75665275243693	961.4987525716739	2	481.7569885253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HEGTLVHAV_	ENSG00000089154|ENST00000300648|GCN1	65.80317337860623	0.1652391959156183	2				NaN	NaN	0	NaN	4359	2985	7345
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7347	22.562	NaN	2857.5	30	0	747.4	0.106	+			7326	DATLSKAAL	9	39	445.25309626546164	888.4916395977233	2	445.2530822753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DATLSKAAL_	ENSG00000198677|ENST00000358746|SKIC3	32.81241826257853	0.4965981579233955	2				NaN	NaN	0	NaN	4360	2985	7345
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7348	22.564	NaN	842.08	30	0	92.549	0.033	+			15997	HANLARAL	8	41	433.2536926269531	NaN	0	433.2536926269531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HANLARAL_	ENSG00000137497|ENST00000393695|NUMA1;nc|ENSG00000137497|Q14980-2|NUMA1;nc|ENSG00000137497|Q14980-3|NUMA1;nc|ENSG00000137497|Q14980-4|NUMA1;NUMA1|p.K1766Rfs*2|1|0.39|ENSG00000137497|chr11:72007357-72007357|G/-|frameshift_variant;NUMA1|p.L1786Pfs*18|1|0.23|ENSG00000137497|chr11:72007295-72007296|-/G|frameshift_variant	26.79610172149135	1.7418937515398478	2				NaN	NaN	0	NaN	4361	2985	7345
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7366	22.601	NaN	5778	30	0	772.51	0.214	+			16561	HFELGGDK	8	51	451.7216807982612	901.4288086633225	2	451.72222900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HFELGGDK_	ENSG00000165502|ENST00000298289|RPL36AL;ENSG00000241343|ENST00000553110|RPL36A;ENST00000399253.3_1_X:140233088-140233355:+|nuORF	113.41158876095287	0.24327961457765637	2				NaN	NaN	0	NaN	4376	2988	7365
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7367	22.604	NaN	6812.5	30	0	2880.4	0.106	+			16891	HPIEVSVGH	9	64	487.7558923765078	973.4972318198156	2	487.75579833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HPIEVSVGH_	ENSG00000141279|ENST00000322157|NPEPPS;ENST00000533538.5_1_17:45664518-45669919:+|nuORF;ENST00000602788.5_1_17:45660176-45669919:+|nuORF;nc|ENSG00000141279|P55786-2|NPEPPS;nc|ENSG00000274487|A6NEC2-2|NPEPPSL1;nc|ENSG00000274487|A6NEC2|NPEPPSL1	97.47269410471826	0.04379738608259218	2				NaN	NaN	0	NaN	4377	2988	7365
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7368	22.607	NaN	3366.2	30	0	1209.6	0.033	+			42587	TASSSILAK	9	46	439.25332903199705	876.4921051307941	2	439.2536926269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TASSSILAK_	ENSG00000146409|ENST00000275227|SLC18B1	49.536043120802724	0.308405419312776	2				NaN	NaN	0	NaN	4378	2988	7365
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7386	22.643	NaN	6783.5	30	0	835.43	0.214			+	43448	TGLSVAAAAV	10	59	430.2475508410872	858.4805487489745	2	430.2474670410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TGLSVAAAAV_	REV__ENST00000418609.5_1_4:186508579-186508693:-|nuORF	102.7733458925114	0.06946074730680096	2				NaN	NaN	0	NaN	4393	2991	7385
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7387	22.646	NaN	6852.5	30	0	1406.2	0.106	+			274	AANVGRVV	8	56	393.2346707028843	784.4547884725686	2	393.2350769042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AANVGRVV_	ENSG00000162981|ENST00000295092|LRATD1	79.9392285194092	0.32408006123154964	2				NaN	NaN	0	NaN	4394	2991	7385
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7388	22.648	NaN	1670.9	30	0	416.2	0.034	+			18488	ISGNPSLIK	9	48	464.7766616997276	927.5387704662552	2	464.7763977050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ISGNPSLIK_	ENSG00000114861|ENST00000649528|FOXP1;nc|ENSG00000285708|Q9H334-3|FOXP1;nc|ENSG00000285708|Q9H334-4|FOXP1;nc|ENSG00000285708|Q9H334-6|FOXP1;nc|ENSG00000285708|Q9H334-7|FOXP1	93.1432384553994	0.056003526918089595	2				NaN	NaN	0	NaN	4395	2991	7385
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7406	22.686	NaN	2675.4	30	0	1186.7	0.142	+			29419	PCAPPPLALA	10	42	475.2631491878146	948.5117454424292	2	475.2632751464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PCAPPPLALA_	ENSG00000124098|ENST00000371384|FAM210B	44.53106598305862	0.5073935772121767	2				NaN	NaN	0	NaN	4410	2994	7405
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7424	22.723	NaN	2639.7	30	0	842.07	0.214	+			5022	ATSDMDIGK	9	46	469.2183634353937	NaN	0	469.2184753417969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSDMDIGK_	ENSG00000102158|ENST00000618282|MAGT1	63.53385203322761	0.134247007536971	2				NaN	NaN	0	NaN	4425	2997	7423
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7425	22.727	NaN	1311.8	30	0	221.17	0.106	+			23170	KVYTPSISK	9	46	511.79831513260797	NaN	0	511.7987365722656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVYTPSISK_	ENSG00000145996|ENST00000274695|CDKAL1;nc|ENSG00000145996|Q5VV42-2|CDKAL1	59.93077597824379	0.14961415694175798	2				NaN	NaN	0	NaN	4426	2997	7423
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7426	22.729	NaN	1490.8	30	0	523.66	0.039				-1	ATKTLCGLLRM	11	35	408.22637939453125	NaN	0	408.22637939453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_ATKTLCGLLRM(Oxidation (M))_	ENSG00000128731|ENST00000261609|HERC2;HERC2|p.G2202Afs*8|1|0.2|ENSG00000128731|chr15:28213923-28213923|C/-|frameshift_variant	22.561587123415745	0.456735970842152	2				NaN	NaN	0	NaN	4427	2997	7423
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7461	22.803	NaN	4585.2	30	0	918.9	0.214	+			16519	HEVGALVRA	9	61	476.27208480800925	950.5296166828185	2	476.272216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HEVGALVRA_	ENSG00000136718|ENST00000259239|IMP4;ENST00000460766.5_1_2:131100637-131104038:+|nuORF;ENST00000462392.5_1_2:131100637-131103595:+|nuORF;ENST00000473689.5_1_2:131100487-131103328:+|nuORF	134.81075121484326	0.012914550297035062	2				NaN	NaN	0	NaN	4456	3003	7460
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7462	22.807	NaN	948.26	30	0	151.01	0.036	+			24233	LESKTYHAL	9	41	531.2852295572189	1060.5559061812378	2	531.2866821289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LESKTYHAL_	ENSG00000108671|ENST00000261712|PSMD11;nc|ENSG00000108671|O00231-2|PSMD11;PSMD11|p.P204Lfs*48|2|0.42|ENSG00000108671|chr17:32469156-32469156|C/-|frameshift_variant	47.657333605630114	0.33044192980041115	2				NaN	NaN	0	NaN	4457	3003	7460
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7480	22.844	NaN	1890.3	30	0	304.85	0.214			+	31223	QGVICREL	8	52	459.24859619140625	NaN	0	459.24859619140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QGVICREL_	REV__FAM200B|p.R279C|2|0.32|ENSG00000237765|chr4:15687812-15687812|C/T|missense_variant	68.78682469695295	1.7418937515398478	2				NaN	NaN	0	NaN	4472	3006	7479
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7481	22.848	NaN	1380.4	30	0	186.76	0.034	+			33810	RQRPIPLS	8	46	483.79557065862093	965.5765883840419	2	483.7958068847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RQRPIPLS_	ENSG00000104881|ENST00000360957|PPP1R13L;ENST00000585905.1_1_19:45898523-45909561:-|nuORF;PPP1R13L|p.P562Afs*10|1|0.56|ENSG00000104881|chr19:45392011-45392012|-/C|frameshift_variant;PPP1R13L|p.Q440Sfs*10|1|0.42|ENSG00000104881|chr19:45395472-45395472|G/-|frameshift_variant	20.94693142431847	0.7975965917238792	2				NaN	NaN	0	NaN	4473	3006	7479
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7499	22.884	NaN	14547	30	0	4185.3	0.214	+			21548	KNTLTLMK	8	79	474.78050977221625	947.5464666112325	2	474.78076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KNTLTLMK_	tr|U7SNL3|U7SNL3_FUSNUPoly(A)polymeraseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02031PE=3SV=1	93.19546047674547	0.2677966331495483	2				NaN	NaN	0	NaN	4488	3009	7498
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7500	22.887	NaN	2279.5	30	0	814.28	0.106	+			31483	QLARREALL	9	34	357.2207336425781	NaN	0	357.2207336425781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QLARREALL_	ENSG00000161509|ENST00000293190|GRIN2C	51.33545320467046	0.19748963086191895	2				NaN	NaN	0	NaN	4489	3009	7498
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7501	22.89	NaN	3090.9	30	0	595.58	0.106	+			22743	KVCNPIITK	9	68	508.30198266533495	1014.5894123974699	2	508.3019714355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KVCNPIITK_	ENSG00000109971|ENST00000534624|HSPA8	122.93914200107957	0.019420478173996256	2				NaN	NaN	0	NaN	4490	3009	7498
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7502	22.891	NaN	4057.2	30	0	1349.6	0.033	+			39194	STAAATVLK	9	53	431.25549909737043	860.4964452615409	2	431.2550964355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STAAATVLK_	ENSG00000158411|ENST00000289359|MITD1	90.60085204095205	0.06317133949006545	2				NaN	NaN	0	NaN	4491	3009	7498
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7520	22.929	NaN	6962.4	30	0	968.34	0.144	+			33413	RIGNFIVKK	9	58	358.89740299711104	1073.6703795915332	3	358.8977355957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RIGNFIVKK_	ENSG00000140263|ENST00000267814|SORD;nc|ENSG00000140263|Q00796-2|SORD	79.45101966838831	0.09992237243120712	2				NaN	NaN	0	NaN	4506	3012	7519
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7538	22.968	NaN	3855.4	30	0	357.33	0.153				-1	WCWRTCWCWRP	11	54	566.2433930618121	1695.708349785636	3	566.2448120117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_WC(Carbamidomethyl (C))WRTC(Carbamidomethyl (C))WCWRP_	ENST00000246115.4_1_19:3178863-3179049:+|nuORF	3.408713201661513	0.8659727860201725	2				NaN	NaN	0	NaN	4521	3015	7537
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7556	23.006	NaN	5261	30	0	1301.2	0.141	+			44086	TPTKTYGM	8	55	449.72042815038895	897.4263033675779	2	449.7208557128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TPTKTYGM_	ENSG00000109814|ENST00000316423|UGDH;UGDH|p.M432Nfs*20|1|0.29|ENSG00000109814|chr4:39503954-39503955|-/T|frameshift_variant;UGDH|p.V371Yfs*6|1|0.34|ENSG00000109814|chr4:39505298-39505298|T/-|frameshift_variant	90.36981228632155	0.27635063874291205	2				NaN	NaN	0	NaN	4536	3018	7555
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7574	23.045	NaN	14930	30	0	2259.8	0.214				-1	 	0	72	471.2557262439654	940.4968995547308	2	471.25616455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4551	3021	7573
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7575	23.049	NaN	4173	30	0	913.29	0.106	+			28345	NEKEDIHSL	9	63	542.7675207230759	1083.5204885129517	2	542.7684326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NEKEDIHSL_	ENSG00000133739|ENST00000360375|LRRCC1;ENST00000523669.5_1_8:86025320-86042154:+|nuORF;LRRCC1|p.E880Rfs*15|1|0.15|ENSG00000133739|chr8:85138174-85138175|-/A|frameshift_variant;LRRCC1|p.K502Nfs*2|1|0.38|ENSG00000133739|chr8:85129254-85129254|A/-|frameshift_variant;LRRCC1|p.M531Nfs*28|1|0.39|ENSG00000133739|chr8:85129338-85129339|-/A|frameshift_variant;LRRCC1|p.T1013Nfs*7|2|0.2|ENSG00000133739|chr8:85145442-85145443|-/A|frameshift_variant;LRRCC1|p.T599Yfs*2|1|0.16|ENSG00000133739|chr8:85131781-85131782|-/T|frameshift_variant;LRRCC1|p.T701Nfs*8|1|0.21|ENSG00000133739|chr8:85134973-85134974|-/A|frameshift_variant;nc|ENSG00000133739|Q9C099-2|LRRCC1	110.11987700582712	0.028875675806141952	2				NaN	NaN	0	NaN	4552	3021	7573
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7576	23.051	NaN	1836.8	30	0	302.64	0.106	+			32919	RDVSPPHL	8	41	460.7508850097656	NaN	0	460.7508850097656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RDVSPPHL_	ENST00000461320.5_1_1:150239547-150241394:-|nuORF	50.0245360154114	1.7418937515398478	2				NaN	NaN	0	NaN	4553	3021	7573
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7577	23.053	NaN	757.21	30	0	208.11	0.033	+			6115	AVNPVAVGK	9	25	427.7584228515625	NaN	0	427.7584228515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVNPVAVGK_	ENSG00000181192|ENST00000263035|DHTKD1	44.116797842482775	0.2472372736944149	2				NaN	NaN	0	NaN	4554	3021	7573
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7595	23.089	NaN	59774	30	0	14294	0.214	+			13830	GQSDIAITK	9	68	466.7556272469667	931.4967015607334	2	466.75579833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GQSDIAITK_	ENSG00000104738|ENST00000649973|MCM4	178.54760496737404	0.0014418427517892064	2				NaN	NaN	0	NaN	4569	3024	7594
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7596	23.093	NaN	4936.4	30	0	1530.5	0.106	+			15927	HADPRIQGY	9	58	528.7641023207468	1055.5136517082935	2	528.7649536132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HADPRIQGY_	ENSG00000066322|ENST00000372458|ELOVL1;ENST00000464204.5_1_1:43830107-43833598:-|nuORF;ENST00000470968.6_1_1:43829589-43833598:-|nuORF;ENST00000479439.5_1_1:43830699-43831981:-|nuORF;ENST00000496932.1_1_1:43830832-43833598:-|nuORF;nc|ENSG00000066322|Q9BW60-2|ELOVL1	49.44154591367651	0.3095138337212152	2				NaN	NaN	0	NaN	4570	3024	7594
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7597	23.095	NaN	6485.2	30	0	2217.3	0.106	+			45402	TVVAAVGPK	9	53	421.26049396901715	840.5064350048343	2	421.2606506347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVVAAVGPK_	ENSG00000198863|ENST00000361677|RUNDC1;ENST00000590836.1_1_17:41132593-41133163:+|nuORF;nc|ENSG00000198863|Q96C34-2|RUNDC1;RUNDC1|p.F530Lfs*9|1|0.11|ENSG00000198863|chr17:42991461-42991461|T/-|frameshift_variant;RUNDC1|p.K513Qfs*16|1|0.27|ENSG00000198863|chr17:42991405-42991406|-/C|frameshift_variant	58.78195531508484	0.22376836668196862	2				NaN	NaN	0	NaN	4571	3024	7594
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7598	23.097	NaN	1747.8	30	0	532.54	0.033			+	-1	ISWSNLFMWL	10	48	438.2182952935559	NaN	0	438.2181396484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_ISWSNLFM(Oxidation (M))WL_	REV__ENST00000592764.5_1_18:13742584-13742647:+|nuORF	38.753607047826485	0.3729281687199363	2				NaN	NaN	0	NaN	4572	3024	7594
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7616	23.133	NaN	2297.7	30	0	574.68	0.142			+	2392	ANSPVAKDL	9	51	457.75018231702046	NaN	0	457.7500305175781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ANSPVAKDL_	REV__PRPF40B|p.R310L|1|0.47|ENSG00000110844|chr12:49634596-49634596|G/T|missense_variant	37.81151784470057	0.28666463014928195	2				NaN	NaN	0	NaN	4587	3027	7615
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7634	23.171	NaN	7700.3	30	0	2662.7	0.214	+			41947	SVVSSVTTK	9	49	454.25807230287506	906.5015916725501	2	454.2579650878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVVSSVTTK_	ENSG00000135124|ENST00000337233|P2RX4;ENST00000499638.6_1_12:121647946-121660004:+|nuORF;nc|ENSG00000135124|Q99571-2|P2RX4;nc|ENSG00000135124|Q99571-3|P2RX4;P2RX4|p.T223Qfs*13|1|0.34|ENSG00000135124|chr12:121228783-121228783|A/-|frameshift_variant	82.7504851949679	0.08565546331141553	2				NaN	NaN	0	NaN	4602	3030	7633
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7635	23.175	NaN	10943	30	0	4217.5	0.106	+			41227	SVLETVEAARK	11	46	401.56235891234707	1201.6652473372412	3	401.5626525878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVLETVEAARK_	tr|U7SNA5|U7SNA5_FUSNUUDP-glucose4-epimeraseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01768PE=3SV=1	29.550750289552195	0.6798279264880025	2				NaN	NaN	0	NaN	4603	3030	7633
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7636	23.177	NaN	1907.4	30	0	614.46	0.106	+			3602	ASVPAGIAK	9	45	407.2451211789179	812.4756894246358	2	407.2453308105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASVPAGIAK_	ENSG00000101825|ENST00000217939|MXRA5;MXRA5|p.Q2683Kfs*44|1|0.34|ENSG00000101825|chrX:3310156-3310156|G/-|frameshift_variant;MXRA5|p.S828Qfs*8|1|0.12|ENSG00000101825|chrX:3323204-3323204|G/-|frameshift_variant	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	4604	3030	7633
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7637	23.179	NaN	4445.3	30	0	723.8	0.106	+			16048	HAVVIHSDY	9	65	520.7613150533276	1039.5080771734551	2	520.7608032226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HAVVIHSDY_	ENSG00000275395|ENST00000616721|FCGBP;FCGBP-ACSS2|1|fusion;FCGBP|p.G150Afs*25|1|0.19|ENSG00000275395|chr19:39927915-39927915|G/-|frameshift_variant;nc|ENSG00000275395|Q9Y6R7|FCGBP	79.9392285194092	0.09781135437301468	2				NaN	NaN	0	NaN	4605	3030	7633
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7638	23.18	NaN	711.01	30	0	362.56	0.106	+			43537	TGWGYRKLR	9	19	379.5483093261719	NaN	0	379.5483093261719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TGWGYRKLR_	ENSG00000088926|ENST00000403665|F11;nc|ENSG00000088926|P03951-2|F11	14.864876125193954	0.3866709117995958	2				NaN	NaN	0	NaN	4606	3030	7633
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7639	23.182	NaN	329.48	30	0	76.425	0.037	+			11686	FRELTELKT	9	28	568.8204345703125	NaN	0	568.8204345703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FRELTELKT_	ENSG00000004139|ENST00000585482|SARM1;ENST00000379061.8_1_17:26708312-26722930:+|nuORF;nc|ENSG00000004139|Q6SZW1-2|SARM1	19.996771675451527	0.3693019437812985	2				NaN	NaN	0	NaN	4607	3030	7633
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7657	23.22	NaN	2087.1	30	0	379.2	0.214	+			35658	SCYSAGIAK	9	44	450.2185390401353	898.4225251470706	2	450.2188415527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SCYSAGIAK_	ENSG00000102524|ENST00000375887|TNFSF13B;nc|ENSG00000102524|Q9Y275-2|TNFSF13B	93.1432384553994	0.056003526918089595	2				NaN	NaN	0	NaN	4622	3033	7656
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7658	23.223	NaN	1833.6	30	0	316.52	0.035	+			34479	RVCNPIISK	9	52	515.2969058812583	1028.5792588293166	2	515.29833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RVCNPIISK_	ENSG00000126803|ENST00000247207|HSPA2	42.86426827375447	0.38666266728046506	2				NaN	NaN	0	NaN	4623	3033	7656
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7676	23.261	NaN	5213.3	30	0	2150.2	0.214			+	44449	TSMVVSTAK	9	55	462.2470751647701	922.4795973963402	2	462.2470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSMVVSTAK_	REV__ENSG00000158553|ENST00000444565|POM121L2;REV__POM121L2|p.D642Gfs*77|1|0.06|ENSG00000158553|chr6:27310248-27310249|-/TACAATTCCT|frameshift_variant	82.24051045832904	0.08786059719216216	2				NaN	NaN	0	NaN	4638	3036	7675
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7677	23.264	NaN	2370.4	30	0	891.37	0.106	+			8266	EAGPSIVH	8	36	405.21114851442206	808.4077440956441	2	405.21148681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EAGPSIVH_	ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;nc|ENSG00000163017|P63267-2|ACTG2	35.200714571348534	0.6875396545722289	2				NaN	NaN	0	NaN	4639	3036	7675
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7678	23.266	NaN	1333.1	30	0	176.58	0.033	+			35929	SEGIKHVL	8	43	441.75596616308974	NaN	0	441.7559814453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEGIKHVL_	ENSG00000165475|ENST00000298248|CRYL1;nc|ENSG00000165475|Q9Y2S2-2|CRYL1	88.64286706044652	1.7418937515398478	2				NaN	NaN	0	NaN	4640	3036	7675
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7696	23.303	NaN	18635	30	0	5221.4	0.214	+			11738	FSGQPGPN	8	62	402.18744917427705	802.3603454153541	2	402.1880187988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FSGQPGPN_	ENSG00000146839|ENST00000613979|ZAN;nc|ENSG00000146839|Q9Y493-2|ZAN;nc|ENSG00000146839|Q9Y493-3|ZAN;nc|ENSG00000146839|Q9Y493-4|ZAN;nc|ENSG00000146839|Q9Y493-5|ZAN;nc|ENSG00000146839|Q9Y493-6|ZAN;nc|ENSG00000146839|Q9Y493-7|ZAN;ZAN|p.C2312Lfs*43|1|0.24|ENSG00000146839|chr7:100786096-100786097|-/TG|frameshift_variant;ZAN|p.E2695Rfs*83|1|0.15|ENSG00000146839|chr7:100794212-100794212|G/-|frameshift_variant;ZAN|p.G2740Efs*38|1|0.09|ENSG00000146839|chr7:100795285-100795285|G/-|frameshift_variant;ZAN|p.I1593Sfs*12|1|0.22|ENSG00000146839|chr7:100767168-100767168|G/-|frameshift_variant	47.91560031466742	0.6071945918984287	2				NaN	NaN	0	NaN	4655	3039	7695
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7697	23.307	NaN	3864	30	0	1659.4	0.106	+			18866	IVGGSSVYK	9	44	455.2556418375827	908.4967307419654	2	455.2558898925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IVGGSSVYK_	ENSG00000178700|ENST00000314636|DHFR2;ENSG00000228716|ENST00000439211|DHFR;nc|ENSG00000228716|P00374-2|DHFR	54.776311868738084	0.25715957988447635	2				NaN	NaN	0	NaN	4656	3039	7695
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7698	23.309	NaN	1868	30	0	281.23	0.106	+			16406	HEQVVERL	8	54	505.2747102249596	1008.5348675167193	2	505.2749938964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HEQVVERL_	ENSG00000161888|ENST00000592540|SPC24;nc|ENSG00000161888|Q8NBT2-2|SPC24	98.62937762414208	0.25143494708580966	2				NaN	NaN	0	NaN	4657	3039	7695
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7699	23.31	NaN	1902.8	30	0	372.03	0.106	+			50822	YESEKVGVA	9	44	491.2477077326519	980.4808625321039	2	491.2480773925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YESEKVGVA_	ENSG00000099940|ENST00000215730|SNAP29;ENST00000490458.1_1_22:21213398-21224822:+|nuORF	52.936696900407355	0.27249468807391813	2				NaN	NaN	0	NaN	4658	3039	7695
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7700	23.312	NaN	1685.5	30	0	236.44	0.106			+	37509	SLLGISAPGA	10	39	443.2556190859971	884.4966852387943	2	443.25579833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SLLGISAPGA_	REV__ENSG00000159579|ENST00000394420|RSPRY1;REV__ENST00000562768.5_1_16:57241991-57250827:+|nuORF;REV__ENST00000568920.1_1_16:57246991-57250108:+|nuORF	35.61828744233558	0.588957954432594	2				NaN	NaN	0	NaN	4659	3039	7695
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7701	23.314	NaN	1311	30	0	376.31	0.033	+			46256	VEFSGKPA	8	37	417.72139811610975	833.4282432990195	2	417.7220458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VEFSGKPA_	ENSG00000147140|ENST00000276079|NONO;ENST00000471419.6_1_X:70511819-70517312:+|nuORF;nc|ENSG00000147140|Q15233-2|NONO	49.44154591367651	0.597725784090933	2				NaN	NaN	0	NaN	4660	3039	7695
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7719	23.351	NaN	15600	30	0	2182.9	0.214			+	21303	KLSNVTLK	8	65	451.7868623042934	901.5591716753868	2	451.78668212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KLSNVTLK_	REV__CHL1|p.E1008Vfs*9|1|0.09|ENSG00000134121|chr3:394848-394849|-/TGTCATTTACT|frameshift_variant;REV__ENSG00000134121|ENST00000256509|CHL1	90.77665401227738	0.27511901818546464	2				NaN	NaN	0	NaN	4675	3042	7718
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7720	23.354	NaN	1849.1	30	0	332.01	0.106	+			15971	HAIMRSPQM	9	58	535.7648255893862	1069.5150982455723	2	535.7656860351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HAIMRSPQM_	CTNNB1|p.L301Hfs*16|1|0.05|ENSG00000168036|chr3:41225827-41225831|TTCAA/-|frameshift_variant;CTNNB1|p.M271Wfs*5|1|0.08|ENSG00000168036|chr3:41225733-41225733|A/-|frameshift_variant;ENSG00000168036|ENST00000349496|CTNNB1	63.53385203322761	0.18415635464017938	2				NaN	NaN	0	NaN	4676	3042	7718
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7721	23.356	NaN	1854.4	30	0	214.39	0.106	+			49230	VVNKTIFAK	9	59	510.31591733345493	1018.6172817337099	2	510.31610107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVNKTIFAK_	ENSG00000197170|ENST00000356126|PSMD12;ENST00000490962.1_1_3:72925982-72926321:-|nuORF;nc|ENSG00000197170|O00232-2|PSMD12	77.31757898189308	0.1091473830098891	2				NaN	NaN	0	NaN	4677	3042	7718
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7722	23.358	NaN	6113	30	0	1079	0.035	+			40264	STSPSVALSK	10	63	488.76873573129365	975.5229185293873	2	489.2702331542969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STSPSVALSK_	BCOR|p.K1061Sfs*52|1|0.28|ENSG00000183337|chrX:40071029-40071029|T/-|frameshift_variant;BCOR|p.K839Qfs*5|1|0.26|ENSG00000183337|chrX:40072831-40072832|-/G|frameshift_variant;BCOR|p.K839Sfs*17|1|0.41|ENSG00000183337|chrX:40072832-40072832|G/-|frameshift_variant;BCOR|p.L1646Sfs*28|1|0.06|ENSG00000183337|chrX:40053926-40053926|G/-|frameshift_variant;BCOR|p.L487Hfs*13|1|0.67|ENSG00000183337|chrX:40073886-40073887|-/GTGT|frameshift_variant;BCOR|p.N529Tfs*60|1|0.51|ENSG00000183337|chrX:40073760-40073760|T/-|frameshift_variant;BCOR|p.P1621Qfs*53|2|0.52|ENSG00000183337|chrX:40054000-40054000|G/-|frameshift_variant;BCOR|p.R1215Kfs*30|1|0.14|ENSG00000183337|chrX:40063811-40063812|-/T|frameshift_variant;ENSG00000183337|ENST00000378444|BCOR;ENST00000490976.5_1_X:39931586-39937182:-|nuORF;nc|ENSG00000183337|Q6W2J9-2|BCOR;nc|ENSG00000183337|Q6W2J9-3|BCOR;nc|ENSG00000183337|Q6W2J9-4|BCOR	98.58198989935565	0.0819402597096128	2				NaN	NaN	0	NaN	4678	3042	7718
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7740	23.396	NaN	19126	30	0	2908.3	0.214	+			10248	ETKQLTEM	8	71	490.2414226494481	978.4682923656962	2	490.24169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ETKQLTEM_	ENSG00000145741|ENST00000380591|BTF3;ENST00000426582.2_1_13:77502247-77502832:+|nuORF;nc|ENSG00000145741|P20290-2|BTF3	138.4795579985376	0.25247962467161583	2				NaN	NaN	0	NaN	4693	3045	7739
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7741	23.399	NaN	30446	30	0	6038.9	0.106	+			51469	YVHDDGRVSY	10	88	404.1877358408394	NaN	0	404.1877136230469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YVHDDGRVSY_	ENSG00000130755|ENST00000597595|GMFG;ENST00000601731.1_1_19:39819119-39826633:-|nuORF	107.00750918261382	0.010667701312799528	2				NaN	NaN	0	NaN	4694	3045	7739
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7742	23.402	NaN	3899.4	30	0	680.28	0.106				-1	TRVTMILTQ	9	59	539.7998138687777	1077.5850748043554	2	539.800537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_TRVTM(Oxidation (M))ILTQ_	ENST00000543397.1_1_12:64488769-64491083:+|nuORF;SRGAP1|p.F541Sfs*40|1|0.09|ENSG00000196935|chr12:64095145-64095145|T/-|frameshift_variant	72.87924865735499	0.12833875048249987	2				NaN	NaN	0	NaN	4695	3045	7739
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7743	23.403	NaN	3971.9	30	0	365.37	0.106				-1	MGHWWWRMWWH	11	56	572.2474503696466	1713.7205217091396	3	572.248291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_MGHWWWRM(Oxidation (M))WWH_	IHH|p.P266Hfs*99|2|0.37|ENSG00000163501|chr2:219055646-219055646|G/-|frameshift_variant	3.61906645146314	0.8634109586117306	2				NaN	NaN	0	NaN	4696	3045	7739
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7744	23.405	NaN	3170.8	30	0	680.95	0.106	+			16133	HEADKTYML	9	68	562.2577432663705	1122.500933599541	2	562.7593994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_HEADKTYM(Oxidation (M))L_	ENSG00000143155|ENST00000367833|TIPRL	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	4697	3045	7739
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7745	23.407	NaN	2367	30	0	810.29	0.033	+			10179	ETAGPWGQ	8	43	423.1943821272867	844.3742113213734	2	423.69635009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ETAGPWGQ_	ENSG00000167173|ENST00000394987|C15orf39;nc|nan|Q6ZRI6-2|C15orf39	40.5726180659479	0.6527593143185008	2				NaN	NaN	0	NaN	4698	3045	7739
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7763	23.443	NaN	6634.4	30	0	4379.5	0.144	+			1690	AGTLLMSKHL	10	36	357.5376780221503	1069.591204666651	3	357.537353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AGTLLMSKHL_	ENST00000529637.5_1_1:22083076-22083133:-|nuORF	27.047317107675042	0.6589519614906109	2				NaN	NaN	0	NaN	4713	3048	7762
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7782	23.483	NaN	3974.5	30	0	1142.4	0.214	+			49361	VVSSTVVTAA	10	51	467.2661438784883	932.5177348237767	2	467.26629638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVSSTVVTAA_	ENST00000372504.5_2_1:43314964-43315012:+|nuORF	51.19269402634007	0.44601001148513897	2				NaN	NaN	0	NaN	4729	3051	7781
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7783	23.487	NaN	2738.4	30	0	493.21	0.106	+			35324	SANECISVK	9	60	475.73421011248763	NaN	0	475.7344665527344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SANECISVK_	ENSG00000112742|ENST00000369798|TTK;nc|ENSG00000112742|P33981-2|TTK	54.722347961057174	0.17414871455573902	2				NaN	NaN	0	NaN	4730	3051	7781
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7784	23.489	NaN	1330.1	30	0	206.13	0.033	+			17585	IEDKSPGK	8	49	437.2375793457031	NaN	0	437.2375793457031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IEDKSPGK_	ENST00000340487.4_1_6:28092425-28093244:+|nuORF	51.33545320467046	1.7418937515398478	2				NaN	NaN	0	NaN	4731	3051	7781
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7802	23.525	NaN	19953	30	0	11384	0.214			+	37694	SLSLNIKTAEK	11	67	401.9026491537136	1202.6861180613407	3	401.9029235839844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLSLNIKTAEK_	REV__ENSG00000101350|ENST00000375712|KIF3B;REV__ENSG00000117245|ENST00000400463|KIF17;REV__ENSG00000131437|ENST00000403231|KIF3A;REV__KIF3B-TOX2|1|fusion;REV__KIF3B-TOX2|2|fusion;REV__nc|ENSG00000117245|Q9P2E2|KIF17;REV__nc|ENSG00000131437|Q9Y496|KIF3A	36.31764250033197	0.6083289427130232	2				NaN	NaN	0	NaN	4746	3054	7801
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7803	23.528	NaN	2281.3	30	0	560.34	0.04			+	29799	PKALLSDAG	9	54	436.2481384277344	NaN	0	436.2481384277344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PKALLSDAG_	REV__ENSG00000196367|ENST00000456197|TRRAP;REV__nc|ENSG00000196367|Q9Y4A5-2|TRRAP;REV__nc|ENSG00000196367|Q9Y4A5|TRRAP;REV__TRRAP-ASNS|1|fusion;REV__TRRAP-ASNS|2|fusion;REV__TRRAP|p.K3443Sfs*19|1|0.28|ENSG00000196367|chr7:99004246-99004246|A/-|frameshift_variant	30.503639358989545	0.3235605894931338	2				NaN	NaN	0	NaN	4747	3054	7801
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7838	23.602	NaN	7300.5	30	0	1066.1	0.214	+			34498	RVFTGVVTK	9	72	503.8057002341211	1005.5968475350422	2	503.80645751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVFTGVVTK_	CCAR1|p.E816Kfs*75|1|0.25|ENSG00000060339|chr10:68771347-68771347|A/-|frameshift_variant;CCAR1|p.Q181Kfs*2|1|0.31|ENSG00000060339|chr10:68747178-68747178|C/-|frameshift_variant;CCAR1|p.S739Vfs*11|1|0.47|ENSG00000060339|chr10:68765992-68765992|A/-|frameshift_variant;ENSG00000060339|ENST00000265872|CCAR1;nc|ENSG00000060339|Q8IX12-2|CCAR1	106.68306549817024	0.032382560583716295	2				NaN	NaN	0	NaN	4776	3060	7837
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7839	23.606	NaN	47456	30	0	10273	0.035	+			3671	ASYTKIVVK	9	83	336.874064317294	1007.6003635520822	3	336.8745422363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASYTKIVVK_	ENSG00000141252|ENST00000437048|VPS53;ENST00000541903.6_1_17:422370-426182:-|nuORF	81.52500206392136	0.09095445986635249	2				NaN	NaN	0	NaN	4777	3060	7837
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7857	23.643	NaN	17131	30	0	4249.3	0.214	+			39285	STASAVPLAK	10	71	472.77363673050195	943.5327205278039	2	472.7740783691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STASAVPLAK_	ENSG00000134240|ENST00000369406|HMGCS2;HMGCS2|p.I277Sfs*22|1|0.26|ENSG00000134240|chr1:119759139-119759139|T/-|frameshift_variant;nc|ENSG00000134240|P54868-2|HMGCS2;nc|ENSG00000134240|P54868-3|HMGCS2	138.06239232086	0.011270695112186733	2				NaN	NaN	0	NaN	4792	3063	7856
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7858	23.647	NaN	9309.1	30	0	1723.1	0.106				-1	 	0	76	595.5973062596554	1783.7700893791662	3	595.5980834960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4793	3063	7856
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7859	23.649	NaN	1552	30	0	222.54	0.106	+			42167	SYTKIVVK	8	48	469.2893981933594	NaN	0	469.2893981933594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SYTKIVVK_	ENSG00000141252|ENST00000437048|VPS53;ENST00000541903.6_1_17:422370-426182:-|nuORF	82.30502934623384	1.7418937515398478	2				NaN	NaN	0	NaN	4794	3063	7856
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7860	23.651	NaN	2219.2	30	0	249.59	0.044			+	-1	KFCKQLRCYQC	11	49	530.9155980550231	NaN	0	531.2491455078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	3 Carbamidomethyl (C)	_KFC(Carbamidomethyl (C))KQLRC(Carbamidomethyl (C))YQC(Carbamidomethyl (C))_	REV__RARG|p.E152K|1|0.2|ENSG00000172819|chr12:53215314-53215314|C/T|missense_variant	9.64613948735714	0.456735970842152	2				NaN	NaN	0	NaN	4795	3063	7856
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7878	23.688	NaN	4356.6	30	0	841.73	0.214	+			33430	RIISEAIAK	9	66	500.8107984766908	999.6070440201817	2	500.8108215332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RIISEAIAK_	CHD9|p.F760Lfs*16|3|0.47|ENSG00000177200|chr16:53229088-53229088|T/-|frameshift_variant;CHD9|p.K703Rfs*7|1|0.22|ENSG00000177200|chr16:53227455-53227455|A/-|frameshift_variant;CHD9|p.M2707Tfs*40|1|0.1|ENSG00000177200|chr16:53324320-53324321|-/C|frameshift_variant;CHD9|p.N1798Tfs*17|1|0.12|ENSG00000177200|chr16:53292931-53292931|A/-|frameshift_variant;CHD9|p.R2541Kfs*9|1|0.11|ENSG00000177200|chr16:53318242-53318243|-/A|frameshift_variant;CHD9|p.R2632Dfs*28|1|0.35|ENSG00000177200|chr16:53324090-53324090|G/-|frameshift_variant;CHD9|p.T582Nfs*6|2|0.19|ENSG00000177200|chr16:53209766-53209767|-/A|frameshift_variant;CHD9|p.T582Qfs*7|2|0.35|ENSG00000177200|chr16:53209767-53209767|A/-|frameshift_variant;CHD9|p.Y645Ifs*11|1|0.23|ENSG00000177200|chr16:53226394-53226395|-/A|frameshift_variant;ENSG00000177200|ENST00000447540|CHD9;nc|ENSG00000177200|Q3L8U1-2|CHD9;nc|ENSG00000177200|Q3L8U1-3|CHD9	88.17693792209575	0.07000514020414955	2				NaN	NaN	0	NaN	4810	3066	7877
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7879	23.692	NaN	2026.7	30	0	528.52	0.106				-1	IIKHPMDM	8	29	334.1700439453125	NaN	0	334.1700439453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_IIKHPMDM(Oxidation (M))_	ENSG00000141867|ENST00000679869|BRD4;nc|ENSG00000141867|O60885-2|BRD4;nc|ENSG00000141867|O60885-3|BRD4	25.450171626174864	1.7418937515398478	2				NaN	NaN	0	NaN	4811	3066	7877
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7880	23.694	NaN	2810.2	30	0	618.6	0.033			+	48622	VTSGKAAPL	9	47	422.2500476244301	842.4855423156603	2	422.25018310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTSGKAAPL_	REV__CNTN3|p.S585Ifs*9|1|0.05|ENSG00000113805|chr3:74302724-74302725|-/GGAAATA|frameshift_variant;REV__CNTN3|p.S585Tfs*10|1|0.04|ENSG00000113805|chr3:74302722-74302723|-/AG|frameshift_variant;REV__ENSG00000113805|ENST00000263665|CNTN3	62.107414245175825	0.1960472003779324	2				NaN	NaN	0	NaN	4812	3066	7877
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7898	23.731	NaN	4335.1	30	0	651.21	0.214	+			15972	HAIMRSPQM	9	58	535.7648255893862	1069.5150982455723	2	535.7664794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HAIMRSPQM_	CTNNB1|p.L301Hfs*16|1|0.05|ENSG00000168036|chr3:41225827-41225831|TTCAA/-|frameshift_variant;CTNNB1|p.M271Wfs*5|1|0.08|ENSG00000168036|chr3:41225733-41225733|A/-|frameshift_variant;ENSG00000168036|ENST00000349496|CTNNB1	77.31757898189308	0.1091473830098891	2				NaN	NaN	0	NaN	4827	3069	7897
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7899	23.735	NaN	2899.9	30	0	286.87	0.106	+			27678	MPVAEGKSV	9	55	459.241744239062	NaN	0	459.2418518066406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MPVAEGKSV_	ENSG00000124641|ENST00000265350|MED20;ENST00000467535.5_1_6:41880803-41888587:-|nuORF;nc|ENSG00000288721|Q9H944-2|MED20	101.25262130126117	0.018912469721856617	2				NaN	NaN	0	NaN	4828	3069	7897
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7900	23.737	NaN	2572.8	30	0	708.94	0.106			+	14400	GTAMLFHL	8	41	445.2320689268807	NaN	0	445.2320251464844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTAMLFHL_	REV__ENST00000299427.10_2_11:6636185-6636499:-|nuORF	39.021493756699265	1.7418937515398478	2				NaN	NaN	0	NaN	4829	3069	7897
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7901	23.739	NaN	1816.4	30	0	218.47	0.106	+			8983	EFNTVVKL	8	53	475.26971435546875	NaN	0	475.26971435546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EFNTVVKL_	ENSG00000163431|ENST00000367288|LMOD1;LMOD1|p.A365T|1|0.35|ENSG00000163431|chr1:201899920-201899920|C/T|missense_variant;nc|ENSG00000163431|P29536-2|LMOD1	45.9519527083369	1.7418937515398478	2				NaN	NaN	0	NaN	4830	3069	7897
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7902	23.741	NaN	4094.9	30	0	1704	0.033			+	44297	TSASVPPAAP	10	52	449.23755924861206	896.4605655640241	2	449.2384033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TSASVPPAAP_	REV__PHLDA1|p.C171Vfs*246|1|0.2|ENSG00000139289|chr12:76031232-76031233|-/T|frameshift_variant	68.78682469695295	0.28723163847957256	2				NaN	NaN	0	NaN	4831	3069	7897
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7920	23.778	NaN	24802	30	0	2445.7	0.214	+			37931	SPEEGARVY	9	81	504.2428730977854	1006.4711932623708	2	504.2430725097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SPEEGARVY_	ENSG00000131037|ENST00000201647|EPS8L1;ENST00000587715.1_1_19:55598611-55598979:+|nuORF;ENST00000589362.5_1_19:55593317-55598979:+|nuORF;EPS8L1|p.A674V|1|0.11|ENSG00000131037|chr19:55087371-55087371|C/T|missense_variant;nc|ENSG00000131037|Q8TE68-2|EPS8L1;nc|ENSG00000131037|Q8TE68-4|EPS8L1	201.48782035760374	2.702403686197363E-05	2				NaN	NaN	0	NaN	4846	3072	7919
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7921	23.782	NaN	4204.4	30	0	1780	0.106				-1	 	0	57	495.77138590014465	989.5282188670893	2	495.7715759277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4847	3072	7919
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7922	23.784	NaN	8327.1	30	0	2245.6	0.106	+			23029	KVSSVLLAK	9	66	472.8101139558467	943.6056749784934	2	472.810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KVSSVLLAK_	ENST00000361531.6_1_1:156708347-156710822:-|nuORF;ENST00000368211.8_1_1:156708347-156710908:-|nuORF;ENST00000412846.5_3_1:156708347-156710822:-|nuORF;ENST00000420938.1_1_1:156708347-156710183:-|nuORF;ENST00000434558.5_1_1:156708347-156710981:-|nuORF	82.7504851949679	0.08565546331141553	2				NaN	NaN	0	NaN	4848	3072	7919
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7923	23.786	NaN	8181.3	30	0	1956.9	0.106	+			42215	TAAGTLIAK	9	62	423.257639203174	844.500725473148	2	423.25787353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TAAGTLIAK_	ENSG00000180448|ENST00000313093|ARHGAP45;ENST00000587602.5_1_19:1073185-1086002:+|nuORF;nc|ENSG00000180448|Q92619-2|ARHGAP45	90.60085204095205	0.06317133949006545	2				NaN	NaN	0	NaN	4849	3072	7919
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7924	23.788	NaN	4289.1	30	0	1768.4	0.106	+			17148	HSVFVNVSK	9	59	508.7794498233477	NaN	0	508.7795104980469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HSVFVNVSK_	ENSG00000126524|ENST00000246868|SBDS	34.08650109265054	0.3054714653898425	2				NaN	NaN	0	NaN	4850	3072	7919
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7925	23.79	NaN	3208.8	30	0	715.72	0.045	+			50215	WMYVTWFFWFW	11	50	566.928208028901	NaN	0	566.9281616210938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_WMYVTWFFWFW_	ENSG00000186908|ENST00000426126|ZDHHC17	6.320883175729509	0.456735970842152	2				NaN	NaN	0	NaN	4851	3072	7919
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7926	23.79	NaN	2711.7	30	0	874.63	0.14	+			48057	VSSKTVKE	8	43	439.2528460695826	876.4911392059652	2	439.25341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VSSKTVKE_	ENSG00000174373|ENST00000680220|RALGAPA1;RALGAPA1|p.N1861Tfs*6|1|0.34|ENSG00000174373|chr14:35595743-35595743|T/-|frameshift_variant	40.5726180659479	0.6527593143185008	2				NaN	NaN	0	NaN	4852	3072	7919
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7944	23.828	NaN	7869	30	0	1968	0.214	+			45843	VALDAGTAK	9	60	423.23976283993716	844.4649727466743	2	423.23992919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VALDAGTAK_	ENSG00000198522|ENST00000610189|GPN1;nc|ENSG00000198522|Q9HCN4-2|GPN1;nc|ENSG00000198522|Q9HCN4-3|GPN1;nc|ENSG00000198522|Q9HCN4-4|GPN1;nc|ENSG00000198522|Q9HCN4-5|GPN1	85.16082228582465	0.07850854922700509	2				NaN	NaN	0	NaN	4867	3075	7943
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7945	23.832	NaN	22797	30	0	6134.1	0.106	+			48773	VTYHMFRTK	9	56	394.87393515872833	1181.599976076385	3	394.87432861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTYHMFRTK_	ENST00000453465.1_1_10:21915067-21915193:-|nuORF;ENST00000478691.5_1_1:23664326-23665089:-|nuORF	47.95952297671804	0.32689736945648856	2				NaN	NaN	0	NaN	4868	3075	7943
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7946	23.834	NaN	3941.8	30	0	505.39	0.106	+			15986	HAKYTPSIT	9	63	509.2718454866836	1016.5291380401673	2	509.2729797363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HAKYTPSIT_	ENST00000517813.1_1_8:142202910-142203504:+|nuORF	51.33545320467046	0.2872990594074956	2				NaN	NaN	0	NaN	4869	3075	7943
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7947	23.836	NaN	1102.1	30	0	264.08	0.036	+			31741	QPAPSSTSGSY	11	36	541.2428354134632	1080.4711178937264	2	541.2432250976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QPAPSSTSGSY_	ENSG00000089280|ENST00000254108|FUS;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;FUS|p.P152Lfs*33|1|0.31|ENSG00000089280|chr16:31184324-31184324|C/-|frameshift_variant;nc|ENSG00000089280|P35637-2|FUS	30.568863376406313	0.6691487505135859	2				NaN	NaN	0	NaN	4870	3075	7943
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7965	23.873	NaN	8669.7	30	0	1311.8	0.214			+	-1	KEVSVVCV	8	69	460.2500385016592	918.4855240701185	2	460.24908447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_KEVSVVC(Carbamidomethyl (C))V_	REV__ENSG00000099821|ENST00000588649|POLRMT	57.81127852772723	0.5234495074909924	2				NaN	NaN	0	NaN	4885	3078	7964
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7966	23.877	NaN	805.19	30	0	383.1	0.036			+	12753	GELFLVRLK	9	25	358.89486721292104	NaN	0	358.8947448730469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GELFLVRLK_	REV__nc|ENSG00000121446|A5PLK6-5|RGSL1	19.996771675451527	0.3693019437812985	2				NaN	NaN	0	NaN	4886	3078	7964
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7984	23.914	NaN	13561	30	0	2868.1	0.215	+			4339	ATGNVVVMK	9	72	459.7576687088872	NaN	0	459.7579040527344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATGNVVVMK_	ALDH2|p.A211T|1|0.12|ENSG00000111275|chr12:111790512-111790512|G/A|missense_variant;ENSG00000111275|ENST00000261733|ALDH2;ENST00000548536.1_1_12:112213467-112247376:+|nuORF;nc|ENSG00000111275|P05091-2|ALDH2	150.36159442982594	0.0026033977239465623	2				NaN	NaN	0	NaN	4901	3081	7983
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7985	23.917	NaN	3241.5	30	0	812.43	0.106			+	40254	STSIGAGVL	9	58	402.7264673352852	803.4383817373704	2	402.7270202636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STSIGAGVL_	REV__ENSG00000068903|ENST00000249396|SIRT2;REV__ENST00000476771.5_1_19:39379940-39384459:-|nuORF;REV__nc|ENSG00000068903|Q8IXJ6-2|SIRT2;REV__nc|ENSG00000068903|Q8IXJ6-3|SIRT2;REV__nc|ENSG00000068903|Q8IXJ6-4|SIRT2;REV__nc|ENSG00000068903|Q8IXJ6-5|SIRT2	65.80317337860623	0.1652391959156183	2				NaN	NaN	0	NaN	4902	3081	7983
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7986	23.92	NaN	3686.4	30	0	935.94	0.106	+			44868	TTVEDLGSK	9	58	475.24505011610194	948.4755472990039	2	475.2453308105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TTVEDLGSK_	BSG|p.G175Afs*4|2|0.38|ENSG00000172270|chr19:579603-579603|G/-|frameshift_variant;chr19:579656-581444|473|42.76|0.0|22.03|+|ENST00000618112|BSG,None;ENSG00000172270|ENST00000333511|BSG;ENST00000576925.3_1_19:572634-579657:+|nuORF;nc|ENSG00000172270|P35613-2|BSG	52.936696900407355	0.27249468807391813	2				NaN	NaN	0	NaN	4903	3081	7983
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7987	23.921	NaN	12352	30	0	2218.3	0.035	+			40464	STVSADPVVK	10	78	501.7766009873357	1001.5386490414714	2	501.77740478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STVSADPVVK_	ENSG00000136051|ENST00000332180|WASHC4	138.06239232086	0.011270695112186733	2				NaN	NaN	0	NaN	4904	3081	7983
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8005	23.959	NaN	1809.5	30	0	1170.8	0.214	+			395	AASILGKPA	9	26	414.25274607063585	826.4909392080717	2	414.2530517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AASILGKPA_	ENSG00000099974|ENST00000215770|DDTL;ENSG00000099977|ENST00000398344|DDT;ENST00000444947.2_1_22:24315904-24316657:-|nuORF;nc|ENSG00000099977|P30046-2|DDT	27.882242232435846	0.5426732730940306	2				NaN	NaN	0	NaN	4919	3084	8004
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8006	23.962	NaN	850.04	30	0	263.94	0.034	+			20171	KEKVSLLQ	8	43	472.7922058105469	NaN	0	472.7922058105469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEKVSLLQ_	ENSG00000082805|ENST00000360905|ERC1;ENST00000536573.6_1_12:1213918-1353789:+|nuORF;ERC1|p.K806Efs*29|1|0.44|ENSG00000082805|chr12:1236824-1236825|-/A|frameshift_variant;ERC1|p.L811Yfs*3|1|0.08|ENSG00000082805|chr12:1236848-1236849|-/ATGTA|frameshift_variant;nc|ENSG00000082805|Q8IUD2-2|ERC1;nc|ENSG00000082805|Q8IUD2-3|ERC1;nc|ENSG00000082805|Q8IUD2-4|ERC1;nc|ENSG00000082805|Q8IUD2-5|ERC1	64.20726635412375	1.7418937515398478	2				NaN	NaN	0	NaN	4920	3084	8004
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8024	24	NaN	5119.9	30	0	2151	0.214	+			30964	QEQAAKAVL	9	54	479.27147539978955	956.5283978663791	2	479.27178955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QEQAAKAVL_	ENSG00000130119|ENST00000360845|GNL3L	115.49404669440601	0.023927554121326553	2				NaN	NaN	0	NaN	4935	3087	8023
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8025	24.003	NaN	873.46	30	0	110.71	0.106	+			32705	RAITYQIAK	9	38	532.3169555664062	NaN	0	532.3169555664062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RAITYQIAK_	ENSG00000132467|ENST00000254803|UTP3	58.2462437865262	0.1567987007793744	2				NaN	NaN	0	NaN	4936	3087	8023
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8026	24.005	NaN	2906	30	0	298.66	0.106	+			14337	GTAAGEKLK	9	54	437.7530897191472	873.4916265050945	2	437.75299072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTAAGEKLK_	ENSG00000131721|ENST00000371388|RHOXF2;ENSG00000203989|ENST00000371402|RHOXF2B	85.16082228582465	0.07850854922700509	2				NaN	NaN	0	NaN	4937	3087	8023
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8027	24.007	NaN	10653	30	0	1826.6	0.106	+			33446	RILSGVVTK	9	75	486.8133369650848	971.6121209969696	2	486.81378173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RILSGVVTK_	ENSG00000142534|ENST00000270625|RPS11	89.02883481214508	0.06760336634167786	2				NaN	NaN	0	NaN	4938	3087	8023
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8028	24.009	NaN	1610.8	30	0	924.27	0.106			+	1855	AILAVYSYPP	10	25	365.200942512683	1092.580998138249	3	365.20159912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AILAVYSYPP_	REV__ENSG00000183770|ENST00000648323|FOXL2	23.52269567125451	0.6877354443478558	2				NaN	NaN	0	NaN	4939	3087	8023
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8029	24.011	NaN	476.92	30	0	34.279	0.035	+			21246	KLKKTSVNT	9	39	509.81658076119146	NaN	0	509.816162109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KLKKTSVNT_	tr|U7SU58|U7SU58_FUSNUTyrrecombinasedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01110PE=4SV=1	24.519189625965996	0.35377483217337163	2				NaN	NaN	0	NaN	4940	3087	8023
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8030	24.011	NaN	3183.2	30	0	984.65	0.145			+	19717	KDTFLVGSERK	11	33	427.2382653599116	1278.692966679935	3	427.2392272949219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KDTFLVGSERK_	REV__LEPR|p.L1094F|1|0.29|ENSG00000116678|chr1:65636799-65636799|G/T|missense_variant	22.561587123415745	0.7531385481947795	2				NaN	NaN	0	NaN	4941	3087	8023
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8048	24.051	NaN	6096.5	30	0	1392.7	0.142	+			5272	ATVETTIAR	9	55	481.2687478175869	960.5229427019739	2	481.26898193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATVETTIAR_	ENSG00000064042|ENST00000503057|LIMCH1;LIMCH1|p.K805Rfs*20|1|0.37|ENSG00000064042|chr4:41680049-41680049|A/-|frameshift_variant;LIMCH1|p.T960Pfs*48|1|0.18|ENSG00000064042|chr4:41685768-41685768|A/-|frameshift_variant;nc|ENSG00000064042|Q9UPQ0-10|LIMCH1;nc|ENSG00000064042|Q9UPQ0-2|LIMCH1;nc|ENSG00000064042|Q9UPQ0-3|LIMCH1;nc|ENSG00000064042|Q9UPQ0-4|LIMCH1;nc|ENSG00000064042|Q9UPQ0-5|LIMCH1;nc|ENSG00000064042|Q9UPQ0-6|LIMCH1;nc|ENSG00000064042|Q9UPQ0-8|LIMCH1;nc|ENSG00000064042|Q9UPQ0-9|LIMCH1;nc|ENSG00000064042|Q9UPQ0|LIMCH1	171.53180478179638	0.0025054460641941692	2				NaN	NaN	0	NaN	4956	3090	8047
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8066	24.089	NaN	1261.9	30	0	139.54	0.144	+			33928	RSADLTGLEK	10	49	545.2996561653282	NaN	0	545.2994384765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RSADLTGLEK_	ENSG00000196878|ENST00000356082|LAMB3	89.02883481214508	0.05754025735153368	2				NaN	NaN	0	NaN	4971	3093	8065
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8084	24.128	NaN	7743.5	30	0	4344.5	0.214	+			32460	QVLATTVGK	9	51	458.77698360609605	915.5394142789921	2	458.7769470214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QVLATTVGK_	ENSG00000121057|ENST00000337714|AKAP1;nc|ENSG00000121057|Q92667-2|AKAP1	37.81151784470057	0.4459294069877048	2				NaN	NaN	0	NaN	4986	3096	8083
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8085	24.132	NaN	3122.9	30	0	1310.8	0.106			+	36879	SIGKSPTK	8	40	409.24299332339285	NaN	0	409.2427978515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SIGKSPTK_	REV__ENSG00000164287|ENST00000381375|CDC20B;REV__nc|ENSG00000164287|Q86Y33-2|CDC20B;REV__nc|ENSG00000164287|Q86Y33-3|CDC20B;REV__nc|ENSG00000164287|Q86Y33-4|CDC20B;REV__nc|ENSG00000164287|Q86Y33-5|CDC20B	45.97224482568171	1.7418937515398478	2				NaN	NaN	0	NaN	4987	3096	8083
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8086	24.134	NaN	1019.8	30	0	271.62	0.034			+	18588	ISPVRTTST	9	36	481.2687478175869	960.5229427019739	2	482.2712707519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ISPVRTTST_	REV__ENSG00000075651|ENST00000351298|PLD1;REV__ENST00000475273.6_1_3:171439220-171455712:-|nuORF;REV__nc|ENSG00000075651|Q13393-2|PLD1;REV__nc|ENSG00000075651|Q13393-3|PLD1;REV__nc|ENSG00000075651|Q13393-4|PLD1;REV__PLD1|p.K294Efs*13|1|0.23|ENSG00000075651|chr3:171713918-171713924|CATATTT/-|frameshift_variant;REV__PLD1|p.M193Cfs*16|1|0.32|ENSG00000075651|chr3:171733473-171733473|T/-|frameshift_variant	21.9598887501803	0.5980208138527809	2				NaN	NaN	0	NaN	4988	3096	8083
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8104	24.171	NaN	3051	30	0	557.39	0.214	+			38522	SSCKVLGK	8	49	439.7399640063546	NaN	0	439.25341796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SSC(Carbamidomethyl (C))KVLGK_	ENST00000512214.1_1_4:164533579-164533678:-|nuORF	71.29570347882199	1.7418937515398478	2				NaN	NaN	0	NaN	5003	3099	8103
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8105	24.175	NaN	4621.5	30	0	783.08	0.106	+			5756	AVGKTSFLR	9	54	489.79011944101165	977.5656859488233	2	489.7919006347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVGKTSFLR_	ENSG00000130038|ENST00000440314|CRACR2A	125.71293069911285	0.017741295328254008	2				NaN	NaN	0	NaN	5004	3099	8103
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8106	24.177	NaN	2417.1	30	0	468.24	0.035	+			47944	VSMDYAISK	9	49	515.2500900498395	1028.485627166479	2	515.2503051757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_VSM(Oxidation (M))DYAISK_	ENSG00000196453|ENST00000247930|ZNF777;ZNF777|p.P504Rfs*5|1|0.44|ENSG00000196453|chr7:149432761-149432761|G/-|frameshift_variant	68.84614121027924	0.14577793175421136	2				NaN	NaN	0	NaN	5005	3099	8103
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8121	24.214	NaN	9065.8	30	0	2662.2	0.215			+	37459	SLISTNVAL	9	64	459.2678049396017	916.5210569460035	2	459.7664489746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLISTNVAL_	REV__ENSG00000212864|ENST00000391553|RNF208	42.396135135203025	0.392153681582562	2				NaN	NaN	0	NaN	5017	3102	8120
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8122	24.218	NaN	3389.5	30	0	959.05	0.106	+			13332	GKNTTMVK	8	53	439.7399640063546	NaN	0	439.7402648925781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GKNTTMVK_	ENST00000448115.1_1_1:220490746-220490923:-|nuORF	58.78195531508484	1.7418937515398478	2				NaN	NaN	0	NaN	5018	3102	8120
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8123	24.22	NaN	13487	30	0	2675.1	0.106				-1	 	0	74	524.3126446115742	1046.6107362899484	2	524.3142700195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5019	3102	8120
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8124	24.222	NaN	6743.9	30	0	1358.9	0.106	+			43162	TETHVERVL	9	64	542.2928298459944	1082.5711067587888	2	542.2946166992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TETHVERVL_	ENSG00000076201|ENST00000265562|PTPN23;PTPN23|p.L1513Wfs*71|1|0.44|ENSG00000076201|chr3:47412805-47412805|G/-|frameshift_variant	88.17693792209575	0.07000514020414955	2				NaN	NaN	0	NaN	5020	3102	8120
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8125	24.223	NaN	4162.9	30	0	1338.4	0.106	+			8780	EEIKALREA	9	65	529.7944418566824	NaN	0	529.794677734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EEIKALREA_	ENSG00000197694|ENST00000372739|SPTAN1;nc|ENSG00000197694|Q13813-3|SPTAN1;nc|ENSG00000197694|Q13813|SPTAN1	101.25262130126117	0.018912469721856617	2				NaN	NaN	0	NaN	5021	3102	8120
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8126	24.225	NaN	1672	30	0	338.86	0.037	+			45196	TVNPKESILK	10	47	564.8342197559002	1127.6538865786003	2	564.8356323242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TVNPKESILK_	ENSG00000139687|ENST00000267163|RB1;RB1|p.L561Mfs*9|1|0.07|ENSG00000139687|chr13:48381428-48381432|CCTTG/-|frameshift_variant;RB1|p.V654Cfs*4|1|0.33|ENSG00000139687|chr13:48456343-48456343|A/-|frameshift_variant;RB1|p.Y529*|1|0.23|ENSG00000139687|chr13:48381334-48381335|AC/-|frameshift_variant;RB1|p.Y529Tfs*3|1|0.08|ENSG00000139687|chr13:48381329-48381329|T/-|frameshift_variant	92.23892857375223	0.11825556496531454	2				NaN	NaN	0	NaN	5022	3102	8120
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8144	24.263	NaN	1161.6	30	0	556.17	0.214			+	24467	LGGDGLLG	8	17	351.1960975516708	NaN	0	351.1957702636719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LGGDGLLG_	REV__ENSG00000186191|ENST00000375483|BPIFB4;REV__nc|ENSG00000186191|P59827-2|BPIFB4	15.63621529709179	1.7418937515398478	2				NaN	NaN	0	NaN	5037	3105	8143
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8145	24.267	NaN	1278.9	30	0	718.17	0.036	+			5916	AVLDQLKIK	9	17	343.22160810064406	NaN	0	343.22149658203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVLDQLKIK_	ENSG00000140623|ENST00000268231|SEPTIN12;nc|ENSG00000140623|Q8IYM1-2|SEPTIN12	20.94693142431847	0.3660861156085067	2				NaN	NaN	0	NaN	5038	3105	8143
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8163	24.304	NaN	25890	30	0	8107.6	0.214	+			46915	VIVDSTVGK	9	70	459.2678049396017	916.5210569460035	2	459.7669372558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VIVDSTVGK_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	70.8162118820467	0.13725933411854815	2				NaN	NaN	0	NaN	5053	3108	8162
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8164	24.308	NaN	2743.4	30	0	867.59	0.106	+			146	AAHLRVGL	8	36	418.7583099250915	835.502066916983	2	418.75848388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAHLRVGL_	ENST00000588848.5_3_19:13260460-13260511:-|nuORF	20.481830146152948	0.8005983782650069	2				NaN	NaN	0	NaN	5054	3108	8162
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8165	24.31	NaN	48599	30	0	25327	0.106	+			48850	VVCEYIVKK	9	82	379.88208030670296	1136.624411520309	3	379.8827209472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_VVC(Carbamidomethyl (C))EYIVKK_	EIF2S3|p.I441Nfs*4|1|0.29|ENSG00000130741|chrX:24073223-24073224|-/A|frameshift_variant;ENSG00000130741|ENST00000253039|EIF2S3;ENSG00000180574|ENST00000538173|EIF2S3B;nc|ENSG00000180574|Q2VIR3-2|EIF2S3B	101.25262130126117	0.03792372629710479	2				NaN	NaN	0	NaN	5055	3108	8162
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8166	24.312	NaN	1705.8	30	0	359.98	0.106	+			33022	REIEVEKM	8	52	517.2706112270665	1032.526669520933	2	517.270751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_REIEVEKM_	ENSG00000127586|ENST00000262315|CHTF18;ENST00000498439.1_1_16:846687-847972:+|nuORF;nc|ENSG00000127586|Q8WVB6-2|CHTF18;nc|ENSG00000127586|Q8WVB6-3|CHTF18	42.86426827375447	0.638539151166014	2				NaN	NaN	0	NaN	5056	3108	8162
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8167	24.314	NaN	1168.1	30	0	244.25	0.034	+			2840	ASAIPAYSK	9	38	454.24728722457104	906.4800215159421	2	454.2474670410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASAIPAYSK_	ENSG00000090054|ENST00000262554|SPTLC1;SPTLC1|p.E218Afs*44|1|0.36|ENSG00000090054|chr9:92059215-92059216|CT/-|frameshift_variant	37.81151784470057	0.4459294069877048	2				NaN	NaN	0	NaN	5057	3108	8162
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8186	24.349	NaN	6793.7	30	0	1673	0.214				-1	 	0	57	470.2513192253837	938.4880855175675	2	470.2515869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5073	3111	8185
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8187	24.353	NaN	5920.5	30	0	1759	0.106	+			34669	RVSECLRVLK	10	60	420.5794848952237	1258.716625285871	3	420.5797119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_RVSEC(Carbamidomethyl (C))LRVLK_	ENSG00000158006|ENST00000374282|PAFAH2	92.23892857375223	0.11825556496531454	2				NaN	NaN	0	NaN	5074	3111	8185
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8188	24.355	NaN	4822.2	30	0	736.99	0.106	+			46047	VCEYIVKK	8	57	519.7852052688285	1037.5558576044568	2	519.7864990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_VC(Carbamidomethyl (C))EYIVKK_	EIF2S3|p.I441Nfs*4|1|0.29|ENSG00000130741|chrX:24073223-24073224|-/A|frameshift_variant;ENSG00000130741|ENST00000253039|EIF2S3;ENSG00000180574|ENST00000538173|EIF2S3B;nc|ENSG00000180574|Q2VIR3-2|EIF2S3B	116.90359126533652	0.23898233959989007	2				NaN	NaN	0	NaN	5075	3111	8185
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8189	24.357	NaN	6064.2	30	0	1327.2	0.106	+			7531	DGSIHYGSL	9	58	474.72552889532943	947.4365048574589	2	474.7147521972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DGSIHYGSL_	ENSG00000066933|ENST00000356056|MYO9A;ENST00000563542.5_1_15:72185266-72338904:-|nuORF;MYO9A|p.L1961*|2|0.14|ENSG00000066933|chr15:71878089-71878089|A/-|frameshift_variant;MYO9A|p.Y1422Ifs*8|1|0.18|ENSG00000066933|chr15:71898239-71898239|A/-|frameshift_variant;nc|ENSG00000066933|B2RTY4-2|MYO9A;nc|ENSG00000066933|B2RTY4-3|MYO9A;nc|ENSG00000066933|B2RTY4-4|MYO9A	51.33545320467046	0.2872990594074956	2				NaN	NaN	0	NaN	5076	3111	8185
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8190	24.359	NaN	830.03	30	0	209.49	0.106	+			48041	VSSAKRSLR	9	17	335.2037048339844	NaN	0	335.2037048339844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSSAKRSLR_	ENSG00000136371|ENST00000258874|MTHFS	19.996771675451527	0.3693019437812985	2				NaN	NaN	0	NaN	5077	3111	8185
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8191	24.361	NaN	753	30	0	158.62	0.106			+	-1	RKHMALSRP	9	33	569.3196833071636	1136.624813681127	2	569.3206787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))RKHMALSRP_	REV__ENST00000392558.4_1_1:153964026-153964086:+|nuORF	26.69291269510374	0.5537881896960711	2				NaN	NaN	0	NaN	5078	3111	8185
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8192	24.362	NaN	437.87	30	0	35.796	0.039				-1	LLTSGLELYCQ	11	32	432.8890380859375	NaN	0	432.8890380859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_LLTSGLELYC(Carbamidomethyl (C))Q_	ENSG00000131126|ENST00000598265|TEX101;nc|ENSG00000131126|Q9BY14-2|TEX101	21.780426970141523	0.456735970842152	2				NaN	NaN	0	NaN	5079	3111	8185
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8209	24.398	NaN	7458.3	30	0	1150.7	0.214	+			16066	HAYLSKNSL	9	78	516.7764986257728	1031.5384443183455	2	516.7772216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HAYLSKNSL_	ENSG00000131236|ENST00000372805|CAP1;ENST00000417455.1_1_10:44100293-44100833:-|nuORF;ENST00000461993.1_1_1:40535258-40537202:+|nuORF;ENST00000476047.1_1_3:76483919-76484456:+|nuORF;ENST00000494114.1_1_1:40536414-40537202:+|nuORF;nc|ENSG00000131236|Q01518-2|CAP1	139.97047562133406	0.010493916756945389	2				NaN	NaN	0	NaN	5093	3114	8208
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8210	24.402	NaN	7392.1	30	0	2480.7	0.106			+	1460	AFGAAETQGP	10	59	474.72552889532943	947.4365048574589	2	474.7257080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AFGAAETQGP_	REV__ENST00000300797.7_1_16:29823644-29824345:+|nuORF	56.72105179125745	0.3956618550748046	2				NaN	NaN	0	NaN	5094	3114	8208
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8211	24.404	NaN	2409	30	0	255.58	0.106	+			38128	SPYGGGHAL	9	53	429.7083703601202	857.4021877870405	2	429.70831298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SPYGGGHAL_	ENSG00000187634|ENST00000616016|SAMD11;nc|ENSG00000187634|Q96NU1-1|SAMD11;nc|ENSG00000187634|Q96NU1-2|SAMD11;nc|ENSG00000187634|Q96NU1-4|SAMD11;nc|ENSG00000187634|Q96NU1-5|SAMD11;nc|ENSG00000187634|Q96NU1-6|SAMD11;nc|ENSG00000187634|Q96NU1|SAMD11	71.37791200682192	0.13483053934309522	2				NaN	NaN	0	NaN	5095	3114	8208
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8212	24.406	NaN	2942.3	30	0	1045.8	0.106			+	-1	QTHILHNKCP	10	33	416.54825963835333	1246.62294951526	3	416.548583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_QTHILHNKC(Carbamidomethyl (C))P_	REV__ENST00000369278.4_1_6:97001425-97001509:+|nuORF	26.063383197487333	0.6669871633831898	2				NaN	NaN	0	NaN	5096	3114	8208
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8213	24.408	NaN	1531.7	30	0	1151.3	0.106	+			43932	TPAPPGPAT	9	23	404.7131561057915	807.411759278383	2	404.713623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TPAPPGPAT_	ENSG00000147140|ENST00000276079|NONO;nc|ENSG00000147140|Q15233-2|NONO	21.9598887501803	0.5980208138527809	2				NaN	NaN	0	NaN	5097	3114	8208
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8214	24.409	NaN	896.66	30	0	98.136	0.034			+	-1	DMLMLTVK	8	42	483.7533874511719	NaN	0	483.7533874511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_DMLM(Oxidation (M))LTVK_	REV__ENSG00000131323|ENST00000392745|TRAF3;REV__nc|ENSG00000131323|Q13114-2|TRAF3	24.20275056022122	1.7418937515398478	2				NaN	NaN	0	NaN	5098	3114	8208
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8215	24.41	NaN	1858.5	30	0	261.15	0.138	+			11824	FSVLSTSQ	8	52	434.72429158301446	867.434030232829	2	434.7232666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FSVLSTSQ_	ENSG00000162711|ENST00000336119|NLRP3;nc|ENSG00000162711|Q96P20-5|NLRP3;nc|ENSG00000162711|Q96P20-6|NLRP3;nc|ENSG00000162711|Q96P20|NLRP3	68.78682469695295	0.41700713582915416	2				NaN	NaN	0	NaN	5099	3114	8208
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8233	24.448	NaN	18396	30	0	7433.3	0.215	+			39367	STCSPIISK	9	73	468.246501170108	934.478449407016	2	468.24658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STCSPIISK_	ENSG00000170606|ENST00000304858|HSPA4;ENST00000514825.1_1_5:132437411-132440125:+|nuORF	146.78539889680295	0.007618400906539062	2				NaN	NaN	0	NaN	5114	3117	8232
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8234	24.451	NaN	1689	30	0	763.13	0.035	+			30482	QAESRAVVY	9	36	511.7663706970961	1021.5181884609922	2	511.7671203613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QAESRAVVY_	ENSG00000160218|ENST00000291574|TRAPPC10;TRAPPC10|p.P1021Lfs*23|1|0.56|ENSG00000160218|chr21:44094123-44094123|C/-|frameshift_variant	45.9519527083369	0.35044536499095585	2				NaN	NaN	0	NaN	5115	3117	8232
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8252	24.487	NaN	6692.8	30	0	1284.8	0.214	+			39184	SSYREAVFK	9	68	543.7826237284052	1085.5506945236102	2	543.7830810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSYREAVFK_	ENSG00000138629|ENST00000395081|UBL7	70.8162118820467	0.13725933411854815	2				NaN	NaN	0	NaN	5130	3120	8251
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8253	24.491	NaN	27858	30	0	11716	0.04	+			8077	DVREEGKENAF	11	71	431.8738064716846	1292.5995900152539	3	431.87353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DVREEGKENAF_	ENSG00000109111|ENST00000314616|SUPT6H;nc|ENSG00000109111|Q7KZ85-2|SUPT6H	62.166158670854095	0.3041191743798417	2				NaN	NaN	0	NaN	5131	3120	8251
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8271	24.53	NaN	2531.5	30	0	302.28	0.214	+			20500	KFEDAKLAA	9	57	496.7740990479078	991.5336451626156	2	496.774658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KFEDAKLAA_	ENSG00000153113|ENST00000675179|CAST;nc|ENSG00000153113|P20810-10|CAST;nc|ENSG00000153113|P20810-2|CAST;nc|ENSG00000153113|P20810-3|CAST;nc|ENSG00000153113|P20810-4|CAST;nc|ENSG00000153113|P20810-5|CAST;nc|ENSG00000153113|P20810-7|CAST;nc|ENSG00000153113|P20810-8|CAST;nc|ENSG00000153113|P20810-9|CAST;nc|ENSG00000153113|P20810|CAST	54.722347961057174	0.257609425301511	2				NaN	NaN	0	NaN	5146	3123	8270
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8272	24.533	NaN	8469.4	30	0	497.86	0.106	+			22935	KVQEMNYIQK	10	69	427.5604039766911	1279.6593825302732	3	427.5602111816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVQEMNYIQK_	ENSG00000068366|ENST00000672401|ACSL4;nc|ENSG00000068366|O60488|ACSL4	98.58198989935565	0.0819402597096128	2				NaN	NaN	0	NaN	5147	3123	8270
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8273	24.536	NaN	452.1	30	0	110.49	0.035			+	18067	IKDYKSIR	8	30	511.8033447265625	NaN	0	511.8033447265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IKDYKSIR_	REV__tr|U7SSZ2|U7SSZ2_FUSNUGlycosyltransferasefamily1domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01648PE=4SV=1	28.081489160057373	1.7418937515398478	2				NaN	NaN	0	NaN	5148	3123	8270
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8290	24.572	NaN	12735	30	0	1543.4	0.141	+			42627	TAVEAGRAL	9	62	444.2507842808953	886.4870156285906	2	444.2511291503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAVEAGRAL_	ENSG00000032444|ENST00000600737|PNPLA6;nc|ENSG00000032444|Q8IY17-2|PNPLA6;nc|ENSG00000032444|Q8IY17-3|PNPLA6;nc|ENSG00000032444|Q8IY17-5|PNPLA6;nc|ENSG00000032444|Q8IY17|PNPLA6;PNPLA6|p.S1175Pfs*10|1|0.55|ENSG00000032444|chr19:7558944-7558944|G/-|frameshift_variant	82.7504851949679	0.08565546331141553	2				NaN	NaN	0	NaN	5162	3126	8289
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8308	24.613	NaN	20773	30	0	14614	0.214				-1	 	0	44	322.19335388202427	642.3721548308486	2	322.1935729980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5177	3129	8307
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8309	24.616	NaN	2843.4	30	0	863.23	0.033	+			44859	TTVAVAMGK	9	52	439.2440614718385	876.473570010477	2	439.24444580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTVAVAMGK_	ENSG00000100726|ENST00000262319|TELO2;ENST00000568240.1_1_16:1556929-1559934:+|nuORF	122.1759843771914	0.019882474861609503	2				NaN	NaN	0	NaN	5178	3129	8307
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8327	24.654	NaN	12605	30	0	1914.1	0.214	+			3579	ASVETGFAK	9	64	455.2374572200298	908.4603615068596	2	455.2372131347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASVETGFAK_	ENSG00000042286|ENST00000307864|AIFM2;nc|ENSG00000042286|Q9BRQ8-2|AIFM2	195.06343300570734	5.420119182691198E-05	2				NaN	NaN	0	NaN	5193	3132	8326
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8328	24.657	NaN	1120.3	30	0	403.5	0.106	+			10786	FAHDSTRVI	9	30	523.2763385527527	NaN	0	523.2756958007812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FAHDSTRVI_	ENSG00000080608|ENST00000397885|PUM3	24.519189625965996	0.35377483217337163	2				NaN	NaN	0	NaN	5194	3132	8326
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8329	24.659	NaN	974.33	30	0	154.85	0.033			+	13928	GRRAGLSF	8	40	432.2449035644531	NaN	0	432.2449035644531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GRRAGLSF_	REV__ENST00000571722.3_1_17:18966850-18967177:-|nuORF;REV__ENST00000584923.1_1_17:19091605-19091887:+|nuORF	26.79610172149135	1.7418937515398478	2				NaN	NaN	0	NaN	5195	3132	8326
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8347	24.697	NaN	7615.1	30	0	1007.3	0.142	+			11646	FQHVGKAF	8	61	467.2507806567406	932.4870083802812	2	467.2509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FQHVGKAF_	ENSG00000254772|ENST00000329251|EEF1G;ENST00000526409.5_1_11:62327153-62342310:-|nuORF;nc|ENSG00000254772|P26641-2|EEF1G;NCEH1-EEF1G|1|fusion	97.47269410471826	0.25484828363392314	2				NaN	NaN	0	NaN	5210	3135	8346
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8365	24.736	NaN	16731	30	0	3982	0.214			+	46383	VELGSKLQ	8	64	437.2558010783591	872.4970492235183	2	437.255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VELGSKLQ_	REV__ENST00000259339.6_1_9:132572399-132572609:+|nuORF	90.77665401227738	0.27511901818546464	2				NaN	NaN	0	NaN	5225	3138	8364
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8366	24.74	NaN	2837.3	30	0	464.2	0.106	+			42401	TAKEIINVG	9	50	472.7741265636693	NaN	0	472.7742004394531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAKEIINVG_	CA1|p.H65Afs*8|1|0.33|ENSG00000133742|chr8:85338294-85338295|-/C|frameshift_variant;ENSG00000133742|ENST00000523022|CA1;ENST00000520093.5_1_8:86250427-86253864:-|nuORF	51.19269402634007	0.19847346126499396	2				NaN	NaN	0	NaN	5226	3138	8364
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8367	24.742	NaN	1589.5	30	0	179.96	0.106			+	33344	RHDAALQQ	8	58	469.7457097306762	937.4768665281524	2	469.74639892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RHDAALQQ_	REV__ENST00000488743.6_1_2:27425876-27434347:-|nuORF	84.9155231211612	0.2928622555056503	2				NaN	NaN	0	NaN	5227	3138	8364
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8368	24.744	NaN	2283.4	30	0	481.88	0.106	+			8308	EAISKAEAY	9	48	491.2483636906028	980.4821744480056	2	491.2483215332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EAISKAEAY_	ENSG00000170011|ENST00000302541|MYRIP;nc|ENSG00000170011|Q8NFW9-2|MYRIP;nc|ENSG00000170011|Q8NFW9-3|MYRIP;nc|ENSG00000170011|Q8NFW9-4|MYRIP;nc|ENSG00000170011|Q8NFW9-5|MYRIP;nc|ENSG00000170011|Q8NFW9-6|MYRIP	95.81516180277367	0.04847050768394289	2				NaN	NaN	0	NaN	5228	3138	8364
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8369	24.745	NaN	1781.7	30	0	902.92	0.037				-1	VVCEYIVKK	9	36	379.88278341044384	1136.6265208315315	3	379.8828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_VVC(Carbamidomethyl (C))EYIVKK_	EIF2S3|p.I441Nfs*4|1|0.29|ENSG00000130741|chrX:24073223-24073224|-/A|frameshift_variant;ENSG00000130741|ENST00000253039|EIF2S3;ENSG00000180574|ENST00000538173|EIF2S3B;nc|ENSG00000180574|Q2VIR3-2|EIF2S3B	34.172542307311794	0.4838870758800184	2				NaN	NaN	0	NaN	5229	3138	8364
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8387	24.783	NaN	1978.8	30	0	245.9	0.214	+			40115	STPIPRFW	8	53	502.27158812076215	1002.5286233083243	2	502.2718505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STPIPRFW_	ENST00000509229.1_1_19:45535724-45537626:+|nuORF	44.116797842482775	0.6307669463330267	2				NaN	NaN	0	NaN	5244	3141	8386
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8388	24.787	NaN	2852.4	30	0	1855.5	0.106	+			2443	APHLSKVSM	9	48	485.26322253028417	NaN	0	485.2633361816406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_APHLSKVSM_	ENSG00000146376|ENST00000368149|ARHGAP18;nc|ENSG00000146376|Q8N392-2|ARHGAP18	52.936696900407355	0.1864545979552969	2				NaN	NaN	0	NaN	5245	3141	8386
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8389	24.789	NaN	967.37	30	0	112.24	0.034	+			41473	SVNSAAVLR	9	50	458.7640380859375	NaN	0	458.7640380859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVNSAAVLR_	ENSG00000204120|ENST00000373563|GIGYF2;ENST00000463554.5_1_2:233599907-233635753:+|nuORF;GIGYF2|p.A735Yfs*90|1|0.05|ENSG00000204120|chr2:232815731-232815732|-/TACACACATG|frameshift_variant;GIGYF2|p.L491Ffs*6|1|0.38|ENSG00000204120|chr2:232794934-232794935|-/T|frameshift_variant;GIGYF2|p.L631*|1|0.4|ENSG00000204120|chr2:232809801-232809801|T/-|frameshift_variant;GIGYF2|p.L640Wfs*27|1|0.5|ENSG00000204120|chr2:232811261-232811261|T/-|frameshift_variant;nc|ENSG00000204120|Q6Y7W6-3|GIGYF2;nc|ENSG00000204120|Q6Y7W6-4|GIGYF2;nc|ENSG00000204120|Q6Y7W6-5|GIGYF2	80.45461616416974	0.0698259577396595	2				NaN	NaN	0	NaN	5246	3141	8386
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8407	24.824	NaN	3368.4	30	0	834.37	0.141	+			23527	LAHVGPRL	8	40	431.7665547862623	861.5185566393246	2	431.7666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LAHVGPRL_	ENSG00000132207|ENST00000251303|SLX1A;ENSG00000181625|ENST00000330181|SLX1B;ENST00000565219.1_1_16:29466524-29469442:+|nuORF	44.53106598305862	0.628196326904373	2				NaN	NaN	0	NaN	5261	3144	8406
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8425	24.862	NaN	1293	30	0	321.48	0.143	+			21749	KQNLVIMGK	9	55	515.8074204305651	NaN	0	515.8072509765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KQNLVIMGK_	ENSG00000228716|ENST00000439211|DHFR;ENST00000513314.1_1_5:79945206-79949851:-|nuORF	68.78682469695295	0.1118430353446351	2				NaN	NaN	0	NaN	5276	3147	8424
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8443	24.901	NaN	8009.9	30	0	1457.2	0.143	+			34105	RSQLVLVTK	9	72	522.3318080331721	1042.6490631331442	2	522.3338012695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RSQLVLVTK_	ENSG00000138496|ENST00000682323|PARP9;nc|ENSG00000138496|Q8IXQ6-3|PARP9;nc|ENSG00000138496|Q8IXQ6|PARP9;PARP9|p.T633Pfs*5|2|0.22|ENSG00000138496|chr3:122537047-122537047|T/-|frameshift_variant	68.62578634547417	0.14673074753754126	2				NaN	NaN	0	NaN	5291	3150	8442
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8478	24.979	NaN	2753.9	30	0	196.93	0.143	+			16537	HEVLVTTKV	9	60	513.3029921019952	1024.5914312707903	2	513.303955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HEVLVTTKV_	DHX40|p.A681T|1|0.17|ENSG00000108406|chr17:59605515-59605515|G/A|missense_variant;ENSG00000108406|ENST00000251241|DHX40;nc|ENSG00000108406|Q8IX18-2|DHX40;nc|ENSG00000108406|Q8IX18-3|DHX40;nc|ENSG00000108406|Q8IX18-4|DHX40	129.42129120953632	0.01549634589885217	2				NaN	NaN	0	NaN	5320	3156	8477
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8513	25.056	NaN	56047	30	0	16645	0.214				-1	 	0	74	473.7813073953481	945.5480618574962	2	473.78179931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5349	3162	8512
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8514	25.06	NaN	18882	30	0	5331.3	0.106	+			39626	STIDDTISK	9	72	490.2504415436152	978.4863301540304	2	490.2505187988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STIDDTISK_	ENSG00000113282|ENST00000411809|CLINT1;nc|ENSG00000113282|Q14677-2|CLINT1;nc|ENSG00000113282|Q14677-3|CLINT1	131.61620852596164	0.014413238321579053	2				NaN	NaN	0	NaN	5350	3162	8512
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8515	25.062	NaN	6326.5	30	0	1978.8	0.106			+	22050	KSIVNGPLT	9	64	464.7761410795702	927.5377292259404	2	464.7760314941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KSIVNGPLT_	REV__ENSG00000135298|ENST00000370598|ADGRB3;REV__nc|ENSG00000135298|O60242-2|ADGRB3	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	5351	3162	8512
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8516	25.064	NaN	1868.6	30	0	564.48	0.036			+	3079	ASFVEKRLK	9	31	359.88483870180653	1076.6326867056196	3	359.88519287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASFVEKRLK_	REV__COL6A6|p.Y493Lfs*29|1|0.06|ENSG00000206384|chr3:130566894-130566895|-/GTTGC|frameshift_variant;REV__ENSG00000206384|ENST00000358511|COL6A6;REV__nc|ENSG00000206384|A6NMZ7-2|COL6A6	20.94693142431847	0.6074874384046576	2				NaN	NaN	0	NaN	5352	3162	8512
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8533	25.1	NaN	15528	30	0	3887.7	0.214				-1	 	0	60	458.7763572940192	915.5381616548384	2	458.7764892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5366	3165	8532
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8534	25.103	NaN	6600.1	30	0	1807.8	0.106	+			35936	SEGKAYSL	8	57	427.71607675478276	853.4176005763655	2	427.71624755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEGKAYSL_	ENSG00000180198|ENST00000683442|RCC1;nc|ENSG00000180198|P18754-2|RCC1;RCC1|p.R320W|1|0.47|ENSG00000180198|chr1:28536767-28536767|C/T|missense_variant	77.31757898189308	0.345924878368729	2				NaN	NaN	0	NaN	5367	3165	8532
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8535	25.105	NaN	899.5	30	0	132	0.032	+			46097	VDAVAARV	8	29	400.73458151762816	NaN	0	400.7347106933594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VDAVAARV_	ENSG00000255112|ENST00000526991|CHMP1B	66.42927471994793	1.7418937515398478	2				NaN	NaN	0	NaN	5368	3165	8532
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8553	25.143	NaN	4110.1	30	0	595.12	0.214	+			32735	RAPDVARAL	9	56	484.7850972613346	967.5556415894692	2	484.78521728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RAPDVARAL_	ENSG00000188157|ENST00000379370|AGRN;nc|ENSG00000188157|O00468-2|AGRN;nc|ENSG00000188157|O00468-3|AGRN;nc|ENSG00000188157|O00468-4|AGRN;nc|ENSG00000188157|O00468-5|AGRN;nc|ENSG00000188157|O00468-7|AGRN;nc|ENSG00000188157|O00468|AGRN	77.31757898189308	0.1091473830098891	2				NaN	NaN	0	NaN	5383	3168	8552
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8554	25.146	NaN	1630	30	0	290.25	0.106	+			16319	HEIKKNGI	8	46	469.7742614746094	NaN	0	469.7742614746094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HEIKKNGI_	ENSG00000165899|ENST00000547103|OTOGL;OTOGL|p.C2147Mfs*2|1|0.4|ENSG00000165899|chr12:80367723-80367724|-/A|frameshift_variant;OTOGL|p.K2146Nfs*40|2|0.16|ENSG00000165899|chr12:80367724-80367724|A/-|frameshift_variant	51.33545320467046	1.7418937515398478	2				NaN	NaN	0	NaN	5384	3168	8552
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8555	25.148	NaN	4494.3	30	0	2079.2	0.106	+			31867	QPVSDAKVY	9	52	503.76343578672817	1005.5123186402564	2	503.7640686035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QPVSDAKVY_	ENSG00000145996|ENST00000274695|CDKAL1;nc|ENSG00000145996|Q5VV42-2|CDKAL1	47.657333605630114	0.33044192980041115	2				NaN	NaN	0	NaN	5385	3168	8552
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8556	25.15	NaN	2861	30	0	887.38	0.106	+			9623	ELPRPLLQQ	9	41	365.2165839063847	1092.6279223193542	3	365.21697998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ELPRPLLQQ_	ENST00000506637.2_1_4:81308203-81308479:-|nuORF	29.170058357718403	0.5306379469863586	2				NaN	NaN	0	NaN	5386	3168	8552
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8557	25.152	NaN	1903.9	30	0	377.75	0.106	+			16198	HEATVRLM	8	46	478.75239158081945	955.4902302284389	2	478.75274658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HEATVRLM_	ENSG00000198911|ENST00000361204|SREBF2	58.78195531508484	0.5138399468736706	2				NaN	NaN	0	NaN	5387	3168	8552
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8558	25.154	NaN	1310.7	30	0	243.48	0.033	+			7065	CVAALPVNL	9	51	450.2541439379843	898.4937349427686	2	450.2539367675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_CVAALPVNL_	ENST00000416301.5_1_10:97849055-97849924:-|nuORF	38.80614096846853	0.43426287593479557	2				NaN	NaN	0	NaN	5388	3168	8552
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8576	25.191	NaN	10013	30	0	2544.8	0.214	+			39046	SSSPPILTK	9	68	465.26906605196694	NaN	0	465.26861572265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSSPPILTK_	ENSG00000083168|ENST00000265713|KAT6A;KAT6A|p.D1243Mfs*51|1|0.24|ENSG00000083168|chr8:41934493-41934493|C/-|frameshift_variant;KAT6A|p.P1694Tfs*13|1|0.25|ENSG00000083168|chr8:41933141-41933142|-/G|frameshift_variant	90.60085204095205	0.040385177724871185	2				NaN	NaN	0	NaN	5403	3171	8575
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8577	25.195	NaN	32176	30	0	8089.7	0.106	+			44684	TTIEEDKSVLK	11	73	421.5657837578506	1261.675521873752	3	421.5659484863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTIEEDKSVLK_	ENSG00000183576|ENST00000331768|SETD3	72.87924865735499	0.21173632944124365	2				NaN	NaN	0	NaN	5404	3171	8575
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8578	25.197	NaN	1839	30	0	253.7	0.106			+	-1	MVQKALAN	8	51	445.7428736294098	NaN	0	445.74273681640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))VQKALAN_	REV__ENSG00000125999|ENST00000253354|BPIFB1	47.91560031466742	1.7418937515398478	2				NaN	NaN	0	NaN	5405	3171	8575
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8579	25.199	NaN	13284	30	0	3981.2	0.035	+			44758	TTNDIVISK	9	70	495.77625992197807	989.5379669107562	2	495.77703857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TTNDIVISK_	ENSG00000113141|ENST00000417647|IK	166.0711670676379	0.003437550387609957	2				NaN	NaN	0	NaN	5406	3171	8575
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8597	25.236	NaN	5612.8	30	0	971.91	0.214	+			16183	HEAPGTFRV	9	56	507.2613770751396	1012.5082012170792	2	507.26177978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HEAPGTFRV_	ENSG00000163840|ENST00000296161|DTX3L;nc|ENSG00000163840|Q8TDB6-2|DTX3L	79.71258880314673	0.09879134589249085	2				NaN	NaN	0	NaN	5421	3174	8596
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8598	25.24	NaN	5240.7	30	0	1504.7	0.106	+			48827	VVASPIAAR	9	43	442.2714876682515	882.528422403303	2	442.2713623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVASPIAAR_	ENSG00000184363|ENST00000331563|PKP3;nc|ENSG00000184363|Q9Y446-2|PKP3	79.71258880314673	0.09879134589249085	2				NaN	NaN	0	NaN	5422	3174	8596
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8599	25.242	NaN	2592.6	30	0	989.2	0.106	+			44512	TSTCSPIISK	10	45	518.7700007896055	1035.525448646011	2	518.77099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TSTCSPIISK_	ENSG00000170606|ENST00000304858|HSPA4;ENST00000514825.1_1_5:132437411-132440125:+|nuORF	46.45678178249821	0.4896490706773647	2				NaN	NaN	0	NaN	5423	3174	8596
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8600	25.244	NaN	2849.6	30	0	515.33	0.106	+			41326	SVLRSFRVAK	10	35	388.2398191904757	1161.6976281716272	3	388.23992919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVLRSFRVAK_	ENSG00000164091|ENST00000296490|WDR82	40.05817265558897	0.5486090488315611	2				NaN	NaN	0	NaN	5424	3174	8596
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8601	25.246	NaN	727.93	30	0	250.33	0.106			+	9325	EIFSRLMR	8	16	351.19626142660593	NaN	0	351.1961364746094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EIFSRLMR_	REV__ENSG00000137857|ENST00000389037|DUOX1;REV__ENST00000561220.6_1_15:45434150-45457096:+|nuORF;REV__nc|ENSG00000137857|Q9NRD9-2|DUOX1	11.511019455917149	1.7418937515398478	2				NaN	NaN	0	NaN	5425	3174	8596
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8602	25.247	NaN	2399.7	30	0	1270	0.038			+	-1	KTKKQFTMK	9	24	385.8888180169738	NaN	0	385.8887939453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_KTKKQFTM(Oxidation (M))K_	REV__ENST00000278882.8_1_20:29631550-29631607:+|nuORF;REV__ENST00000507103.1_1_4:190881915-190881972:+|nuORF	19.996771675451527	0.3693019437812985	2				NaN	NaN	0	NaN	5426	3174	8596
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8620	25.285	NaN	3646.9	30	0	1196.2	0.214	+			14014	GSFKLNKKAA	10	38	355.2131515642436	1062.6176252929308	3	355.2135009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSFKLNKKAA_	ENSG00000124575|ENST00000244534|H1-3;ENSG00000168298|ENST00000304218|H1-4;ENSG00000184357|ENST00000331442|H1-5;ENSG00000187837|ENST00000343677|H1-2	30.317721548370564	0.6322445173429027	2				NaN	NaN	0	NaN	5441	3177	8619
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8621	25.289	NaN	7397.4	30	0	1668.4	0.106	+			16024	HATIVSEKL	9	69	499.2871097812227	996.5596666292454	2	499.287353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HATIVSEKL_	ENSG00000144063|ENST00000272462|MALL;ENST00000568189.5_1_2:111003217-111043255:+|nuORF	154.0112374973812	0.005934173778894772	2				NaN	NaN	0	NaN	5442	3177	8619
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8622	25.291	NaN	6571.9	30	0	1856.9	0.106	+			39327	STAVGLVTK	9	56	438.2633850260894	874.5122171189788	2	438.2633361816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STAVGLVTK_	ASH1L|p.H1793Ifs*7|1|0.13|ENSG00000116539|chr1:155438778-155438778|G/-|frameshift_variant;ASH1L|p.I970Lfs*9|1|0.2|ENSG00000116539|chr1:155479962-155479962|T/-|frameshift_variant;ASH1L|p.K1222Rfs*11|4|0.27|ENSG00000116539|chr1:155479205-155479205|T/-|frameshift_variant;ASH1L|p.K1533Sfs*17|1|0.25|ENSG00000116539|chr1:155478272-155478272|T/-|frameshift_variant;ASH1L|p.K2377Nfs*5|1|0.28|ENSG00000116539|chr1:155354570-155354570|T/-|frameshift_variant;ASH1L|p.N1822Tfs*2|1|0.33|ENSG00000116539|chr1:155438690-155438690|T/-|frameshift_variant;ASH1L|p.R712Efs*23|3|0.35|ENSG00000116539|chr1:155480736-155480736|T/-|frameshift_variant;ASH1L|p.S2309Ifs*11|1|0.64|ENSG00000116539|chr1:155357635-155357636|-/T|frameshift_variant;ENSG00000116539|ENST00000392403|ASH1L;nc|ENSG00000116539|Q9NR48|ASH1L	101.45984612302182	0.0377122763612125	2				NaN	NaN	0	NaN	5443	3177	8619
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8623	25.293	NaN	3558.3	30	0	984.18	0.036	+			33166	RETSMVHEL	9	52	551.2711059159014	1100.5276588986028	2	551.2725219726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RETSMVHEL_	ENSG00000058262|ENST00000243253|SEC61A1;ENST00000498837.1_1_3:127786720-127788502:+|nuORF;nc|ENSG00000058262|P61619-3|SEC61A1	63.53385203322761	0.18415635464017938	2				NaN	NaN	0	NaN	5444	3177	8619
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8641	25.33	NaN	31984	30	0	12511	0.214	+			39201	STAAVGVLK	9	67	423.257954891677	844.501356850154	2	423.2580261230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STAAVGVLK_	ENSG00000081019|ENST00000261441|RSBN1;ENST00000476412.5_1_1:114308604-114340019:-|nuORF	166.67852932204877	0.003333876602083393	2				NaN	NaN	0	NaN	5459	3180	8640
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8642	25.334	NaN	9872.7	30	0	5247.5	0.106			+	22851	KVINALSTD	9	55	480.77115249496325	959.5277520567265	2	480.7713623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVINALSTD_	REV__chr17:81953267-81953858|204|15.17|0.24|5.96|-|1|TE_info:AluSq2,AluSq2_dup53237,Alu,SINE,donor,-,81953858,81954077|NOTUM,None|3	66.42927471994793	0.16001998865088202	2				NaN	NaN	0	NaN	5460	3180	8640
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8643	25.336	NaN	1382	30	0	236.05	0.034	+			25944	LSHTGKLAL	9	47	470.2839050292969	NaN	0	470.2839050292969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSHTGKLAL_	ENST00000500112.1_1_8:128221640-128221847:-|nuORF	47.657333605630114	0.2228375344433429	2				NaN	NaN	0	NaN	5461	3180	8640
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8661	25.372	NaN	5380.9	30	0	981.03	0.214			+	27194	MEATRLAP	8	60	444.7343355960688	887.4541182589376	2	444.73370361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MEATRLAP_	REV__ENST00000602204.1_1_19:16980786-16982347:+|nuORF	87.75429964447693	0.2842685068779738	2				NaN	NaN	0	NaN	5476	3183	8660
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8662	25.375	NaN	3181.1	30	0	283.65	0.106			+	-1	TIRGHPTSMSD	11	59	609.2827478836672	NaN	0	609.282470703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_TIRGHPTSM(Oxidation (M))SD_	REV__ENSG00000181143|ENST00000397910|MUC16;REV__MUC16|p.F10843Sfs*11|1|0.22|ENSG00000181143|chr19:8938427-8938427|A/-|frameshift_variant;REV__MUC16|p.K6604Rfs*26|1|0.27|ENSG00000181143|chr19:8956959-8956959|T/-|frameshift_variant;REV__MUC16|p.L8270Wfs*63|1|0.04|ENSG00000181143|chr19:8951962-8951963|-/ACCA|frameshift_variant;REV__MUC16|p.N9430Tfs*13|1|0.14|ENSG00000181143|chr19:8948481-8948481|T/-|frameshift_variant;REV__MUC16|p.S4774Ffs*12|1|0.01|ENSG00000181143|chr19:8962451-8962452|-/AC|frameshift_variant;REV__MUC16|p.S6098Wfs*23|1|0.17|ENSG00000181143|chr19:8958477-8958478|-/GGTGACATCTCTTGGCCAACTGACCCTGGACACATCAACC|frameshift_variant;REV__MUC16|p.S6614Lfs*30|1|0.04|ENSG00000181143|chr19:8956931-8956932|-/A|frameshift_variant;REV__MUC16|p.S7713Lfs*5|1|0.45|ENSG00000181143|chr19:8953634-8953634|G/-|frameshift_variant;REV__MUC16|p.T7968Nfs*2|1|0.41|ENSG00000181143|chr19:8952867-8952868|-/T|frameshift_variant;REV__MUC16|p.T8791Qfs*38|1|0.31|ENSG00000181143|chr19:8950403-8950403|G/-|frameshift_variant	24.519189625965996	0.45614437233802635	2				NaN	NaN	0	NaN	5477	3183	8660
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8663	25.377	NaN	1694.2	30	0	286.04	0.034			+	26067	LSLRQLPV	8	42	463.2951235314509	924.5756941297018	2	463.2953186035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSLRQLPV_	REV__ENSG00000165355|ENST00000298097|FBXO33	44.116797842482775	0.6307669463330267	2				NaN	NaN	0	NaN	5478	3183	8660
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8681	25.414	NaN	2564.6	30	0	608.57	0.143	+			18567	ISNSTLLKD	9	53	495.77625992197807	989.5379669107562	2	496.7750244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ISNSTLLKD_	CD96|p.V223Efs*38|1|0.05|ENSG00000153283|chr3:111579102-111579103|-/AGGAAGAA|frameshift_variant;ENSG00000153283|ENST00000352690|CD96;nc|ENSG00000153283|P40200|CD96	32.81241826257853	0.4965981579233955	2				NaN	NaN	0	NaN	5493	3186	8680
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8699	25.452	NaN	4941.5	30	0	2465.8	0.214	+			20906	KISYVISIK	9	44	350.8900515198554	NaN	0	351.2247314453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KISYVISIK_	ENSG00000106868|ENST00000374270|SUSD1;nc|ENSG00000106868|Q6UWL2-2|SUSD1;nc|ENSG00000106868|Q6UWL2-3|SUSD1;SUSD1|p.F594Lfs*13|1|0.16|ENSG00000106868|chr9:112063005-112063005|A/-|frameshift_variant	37.81151784470057	0.28666463014928195	2				NaN	NaN	0	NaN	5508	3189	8698
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8700	25.455	NaN	1049.7	30	0	261.19	0.035			+	28552	NIVNLAEKF	9	40	524.2964158393958	1046.5782787455914	2	524.29736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NIVNLAEKF_	REV__ENSG00000174780|ENST00000642900|SRP72;REV__nc|ENSG00000174780|O76094-2|SRP72	23.04248740728303	0.5879033540491928	2				NaN	NaN	0	NaN	5509	3189	8698
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8718	25.493	NaN	46022	30	0	18828	0.214	+			2755	ARGGRRRWHRG	11	59	455.59276046431216	1363.7564519931366	3	455.5931396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ARGGRRRWHRG_	ENST00000569248.5_1_16:730510-731029:+|nuORF	27.64392233501311	0.6998289966465058	2				NaN	NaN	0	NaN	5524	3192	8717
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8719	25.496	NaN	18001	30	0	5032.7	0.106	+			41478	SVNSTVLVK	9	69	473.7817858838362	NaN	0	473.78204345703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVNSTVLVK_	ENSG00000160593|ENST00000356289|JAML;nc|ENSG00000160593|Q86YT9-2|JAML;nc|ENSG00000160593|Q86YT9-4|JAML	128.60217544463768	0.0008034130035139065	2				NaN	NaN	0	NaN	5525	3192	8717
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8720	25.498	NaN	2972.5	30	0	346.59	0.032	+			35143	SAIAIATGK	9	50	416.25016353180007	830.4857741304002	2	416.2503662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAIAIATGK_	CTSH|p.N292Mfs*8|1|0.31|ENSG00000103811|chr15:78923050-78923050|T/-|frameshift_variant;ENSG00000103811|ENST00000220166|CTSH;ENST00000528191.5_1_15:79224365-79229419:-|nuORF;ENST00000533777.5_1_15:79224365-79230096:-|nuORF;ENST00000534038.5_1_15:79224365-79237386:-|nuORF	70.8162118820467	0.13725933411854815	2				NaN	NaN	0	NaN	5526	3192	8717
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8738	25.535	NaN	2967.3	30	0	1214.6	0.214	+			43274	TFGGLGSK	8	28	383.70813297315544	765.4017130131109	2	383.7084655761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TFGGLGSK_	ENSG00000124942|ENST00000378024|AHNAK	52.936696900407355	0.5717071646657654	2				NaN	NaN	0	NaN	5541	3195	8737
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8739	25.539	NaN	1347	30	0	199.86	0.106			+	16484	HETRVLAV	8	51	462.76617431640625	NaN	0	462.76617431640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HETRVLAV_	REV__ENSG00000133265|ENST00000433386|HSPBP1;REV__nc|ENSG00000133265|Q9NZL4-3|HSPBP1	47.91560031466742	1.7418937515398478	2				NaN	NaN	0	NaN	5542	3195	8737
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8740	25.541	NaN	2337.6	30	0	644.6	0.106	+			44577	TTATPTIMK	9	49	482.26228567520604	962.5100184172121	2	482.26275634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TTATPTIMK_	ENSG00000020577|ENST00000554335|SAMD4A;ENST00000556069.5_1_14:55241706-55251269:+|nuORF;nc|ENSG00000020577|Q9UPU9-2|SAMD4A;nc|ENSG00000020577|Q9UPU9-3|SAMD4A	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	5543	3195	8737
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8741	25.543	NaN	731.04	30	0	79.166	0.106			+	19613	KDGPAPSGLL	10	44	477.76593017578125	NaN	0	477.76593017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KDGPAPSGLL_	REV__MNX1|p.P336S|1|0.24|ENSG00000130675|chr7:157005720-157005720|G/A|missense_variant	36.446750945000026	0.3805027428805705	2				NaN	NaN	0	NaN	5544	3195	8737
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8742	25.544	NaN	999.71	30	0	475.76	0.106			+	48438	VTKNIHYR	8	25	515.7921225894684	1029.5696922457366	2	515.79296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTKNIHYR_	REV__ENSG00000169855|ENST00000464233|ROBO1;REV__nc|ENSG00000169855|Q9Y6N7-2|ROBO1;REV__nc|ENSG00000169855|Q9Y6N7-3|ROBO1;REV__nc|ENSG00000169855|Q9Y6N7-4|ROBO1;REV__nc|ENSG00000169855|Q9Y6N7-5|ROBO1;REV__nc|ENSG00000169855|Q9Y6N7-6|ROBO1;REV__ROBO1|p.K1491Nfs*16|1|0.2|ENSG00000169855|chr3:78607004-78607004|C/-|frameshift_variant;REV__ROBO1|p.R1504Sfs*40|1|0.01|ENSG00000169855|chr3:78606968-78606969|-/TGAC|frameshift_variant	29.14955571784316	0.7342621283720113	2				NaN	NaN	0	NaN	5545	3195	8737
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8743	25.546	NaN	378.01	30	0	76.546	0.033	+			25519	LPSVLIGNG	9	23	435.2580703380266	868.5015877428532	2	435.2582702636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LPSVLIGNG_	ENST00000357700.10_1_10:5681946-5682531:-|nuORF	35.61828744233558	0.47037581924408073	2				NaN	NaN	0	NaN	5546	3195	8737
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8761	25.583	NaN	2691.8	30	0	484.19	0.141	+			29882	PLKSIPVS	8	46	420.7644572639856	NaN	0	420.76446533203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PLKSIPVS_	ENSG00000169876|ENST00000306151|MUC17;MUC17|p.N4205Tfs*18|1|0.07|ENSG00000169876|chr7:101048918-101048918|A/-|frameshift_variant;MUC17|p.S3486Qfs*18|1|0.41|ENSG00000169876|chr7:101041869-101041870|-/C|frameshift_variant;nc|ENSG00000169876|Q685J3-2|MUC17	24.20275056022122	1.7418937515398478	2				NaN	NaN	0	NaN	5561	3198	8760
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8779	25.622	NaN	6682.2	30	0	884.19	0.214	+			6391	AVVETSLTK	9	60	474.27469308854785	946.5348332438957	2	474.27423095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVVETSLTK_	ACAP2|p.G547Efs*90|1|0.05|ENSG00000114331|chr3:195295740-195295741|-/TTCTACATATT|frameshift_variant;ACAP2|p.N618Tfs*15|1|0.31|ENSG00000114331|chr3:195292365-195292365|T/-|frameshift_variant;ENSG00000114331|ENST00000326793|ACAP2;ENST00000480906.5_1_3:195057651-195163594:-|nuORF;ENST00000481463.5_1_3:195078468-195162982:-|nuORF	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	5576	3201	8778
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8780	25.626	NaN	2172.4	30	0	375.57	0.033	+			23749	LCAWKGIV	8	53	445.25307206733186	NaN	0	445.2402648925781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LCAWKGIV_	ENST00000568363.5_1_17:75089350-75089416:+|nuORF	50.0245360154114	1.7418937515398478	2				NaN	NaN	0	NaN	5577	3201	8778
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8798	25.663	NaN	2193.1	30	0	555.42	0.142				-1	AAMPGFIAK	9	48	461.2470581364665	NaN	0	461.2467956542969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_AAM(Oxidation (M))PGFIAK_	ENSG00000122008|ENST00000241436|POLK;ENST00000506928.5_1_5:74842847-74879138:+|nuORF;ENST00000508867.5_1_5:74842847-74877278:+|nuORF;nc|ENSG00000122008|Q9UBT6-2|POLK;nc|ENSG00000122008|Q9UBT6-3|POLK;nc|ENSG00000122008|Q9UBT6-4|POLK;nc|ENSG00000122008|Q9UBT6-5|POLK;nc|ENSG00000122008|Q9UBT6-6|POLK;nc|ENSG00000122008|Q9UBT6-7|POLK;nc|ENSG00000122008|Q9UBT6-8|POLK;POLK|p.K571Nfs*18|1|0.29|ENSG00000122008|chr5:75596401-75596401|A/-|frameshift_variant	33.51558372728122	0.30835390848773375	2				NaN	NaN	0	NaN	5592	3204	8797
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8816	25.702	NaN	9158.4	30	0	4745.1	0.214	+			31758	QPFGGGSHM	9	60	459.20032977313684	916.3861066130737	2	459.2005310058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QPFGGGSHM_	ENSG00000077150|ENST00000661543|NFKB2;ENST00000336486.5_1_10:104157832-104159780:+|nuORF;ENST00000467116.5_1_10:104155716-104158713:+|nuORF;nc|ENSG00000077150|Q00653-3|NFKB2;nc|ENSG00000077150|Q00653-4|NFKB2	68.484700416344	0.1473408039581241	2				NaN	NaN	0	NaN	5607	3207	8815
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8817	25.706	NaN	1601.8	30	0	345.79	0.035			+	-1	MQILCGVYS	9	36	515.2422150222832	1028.4698771113663	2	515.2430419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_M(Oxidation (M))QILCGVYS_	REV__ENSG00000136939|ENST00000259466|OR1L4;REV__OR1L4|p.F261Lfs*9|1|0.36|ENSG00000136939|chr9:122724769-122724769|T/-|frameshift_variant	38.80614096846853	0.43426287593479557	2				NaN	NaN	0	NaN	5608	3207	8815
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8835	25.742	NaN	3353.5	30	0	654.23	0.214	+			16126	HEAAARIQL	9	68	504.78299772840904	1007.5514425236181	2	504.7834777832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HEAAARIQL_	ENSG00000104133|ENST00000261866|SPG11;ENST00000561268.5_1_15:44859616-44864898:-|nuORF;nc|ENSG00000104133|Q96JI7-3|SPG11	77.31757898189308	0.1091473830098891	2				NaN	NaN	0	NaN	5623	3210	8834
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8836	25.746	NaN	2477.2	30	0	386.46	0.035			+	31396	QKKKMPSK	8	64	495.7923196236842	989.5700863141684	2	496.2939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_QKKKM(Oxidation (M))PSK_	REV__ENSG00000173575|ENST00000394196|CHD2;REV__nc|ENSG00000173575|O14647-2|CHD2	71.87747018426188	0.391254423828572	2				NaN	NaN	0	NaN	5624	3210	8834
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8854	25.873	NaN	1390.9	30	0	327.29	0.143			+	16554	HEVVARPEL	9	43	525.2904438793366	1048.5663348254732	2	525.2922973632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HEVVARPEL_	REV__ENSG00000158816|ENST00000289815|VWA5B1;REV__nc|ENSG00000158816|Q5TIE3-5|VWA5B1;REV__nc|ENSG00000158816|Q5TIE3|VWA5B1	32.81241826257853	0.4965981579233955	2				NaN	NaN	0	NaN	5639	3213	8853
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8873	25.913	NaN	6426.2	30	0	2970.9	0.214	+			48974	VVGGLAVGK	9	40	400.2551242796033	798.4956956260066	2	400.2554626464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVGGLAVGK_	ENSG00000103249|ENST00000382745|CLCN7;ENST00000563822.1_1_16:1505719-1509320:-|nuORF;ENST00000564968.1_1_16:1507514-1509320:-|nuORF;nc|ENSG00000103249|P51798-2|CLCN7;RBCK1-CLCN7|1|fusion;RBCK1-CLCN7|2|fusion	88.64286706044652	0.06869153472052109	2				NaN	NaN	0	NaN	5655	3216	8872
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8874	25.916	NaN	3389.1	30	0	1380.1	0.106	+			48679	VTTAFVAGK	9	49	447.25781098409044	NaN	0	447.2578430175781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTTAFVAGK_	ENST00000321521.13_1_5:102456077-102465065:+|nuORF	71.87747018426188	0.0992163553043454	2				NaN	NaN	0	NaN	5656	3216	8872
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8875	25.918	NaN	1188.8	30	0	355.21	0.032			+	23697	LATKAKEA	8	38	416.25030517578125	NaN	0	416.25030517578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LATKAKEA_	REV__ADGRF1|p.S523Pfs*3|1|0.35|ENSG00000153292|chr6:47009868-47009868|A/-|frameshift_variant;REV__ADGRF1|p.S617Afs*12|1|0.14|ENSG00000153292|chr6:47009586-47009586|T/-|frameshift_variant;REV__ENSG00000153292|ENST00000371253|ADGRF1;REV__ENST00000471487.5_1_6:46982380-46993719:-|nuORF	35.61828744233558	1.7418937515398478	2				NaN	NaN	0	NaN	5657	3216	8872
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8894	25.955	NaN	19343	30	0	5199.9	0.214	+			41849	SVSTVLTSK	9	65	461.26587833590827	920.5172037386166	2	461.265869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSTVLTSK_	ENSG00000188536|ENST00000251595|HBA2;ENSG00000206172|ENST00000320868|HBA1;HBA1|p.A131T|1|0.07|ENSG00000206172|chr16:177373-177373|G/A|missense_variant	85.86182877749512	0.07653218437724067	2				NaN	NaN	0	NaN	5673	3219	8893
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8895	25.959	NaN	5421.9	30	0	2025.2	0.033	+			44543	TTAAVGVLK	9	57	430.26566799584623	858.5167830584925	2	430.26568603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTAAVGVLK_	ENSG00000187257|ENST00000334955|RSBN1L;ENST00000462800.1_1_7:77397938-77402638:+|nuORF;ENST00000468035.1_1_7:77394853-77402638:+|nuORF;nc|ENSG00000187257|Q6PCB5-2|RSBN1L;PTPN12-RSBN1L|1|fusion;PTPN12-RSBN1L|2|fusion;PTPN12-RSBN1L|3|fusion;PTPN12-RSBN1L|4|fusion;PTPN12-RSBN1L|5|fusion;PTPN12-RSBN1L|6|fusion;PTPN12-RSBN1L|7|fusion;PTPN12-RSBN1L|8|fusion	161.89823264540465	0.004149850016316161	2				NaN	NaN	0	NaN	5674	3219	8893
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8913	25.996	NaN	65356	30	0	23199	0.214				-1	 	0	55	348.21667259492153	1041.6281883849647	3	348.2169189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5689	3222	8912
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8914	26	NaN	35107	30	0	18793	0.106	+			43772	TLHSHKPPL	9	65	515.2950580767898	1028.5755632203795	2	515.2955322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TLHSHKPPL_	ENSG00000101574|ENST00000574538|METTL4;ENST00000573134.1_1_18:2539001-2552773:-|nuORF	71.29570347882199	0.13518600952103718	2				NaN	NaN	0	NaN	5690	3222	8912
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8915	26.002	NaN	3209.5	30	0	1199.8	0.106			+	565	ADGLSTLVK	9	54	452.26039514144935	902.5062373496987	2	452.2607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ADGLSTLVK_	REV__ENSG00000196565|ENST00000336906|HBG2;REV__ENSG00000213934|ENST00000330597|HBG1;REV__HBG2|p.K77N|1|0.06|ENSG00000196565|chr11:5254376-5254376|C/A|missense_variant	76.7741389293348	0.11149722112137898	2				NaN	NaN	0	NaN	5691	3222	8912
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8916	26.003	NaN	1902	30	0	184.74	0.034	+			43819	TLQNVLRK	8	51	486.3028966401365	NaN	0	486.30255126953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TLQNVLRK_	ENSG00000108424|ENST00000290158|KPNB1;nc|ENSG00000108424|Q14974-2|KPNB1	110.11987700582712	1.7418937515398478	2				NaN	NaN	0	NaN	5692	3222	8912
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8934	26.041	NaN	1008.4	30	0	125.88	0.141	+			20827	KIGGRGAVI	9	42	435.7792657969246	869.5439786606493	2	435.77874755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KIGGRGAVI_	tr|U7SQS9|U7SQS9_FUSNUsite-specificDNA-methyltransferase(adenine-specific)OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01567PE=4SV=1	50.0245360154114	0.3026755932229825	2				NaN	NaN	0	NaN	5707	3225	8933
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8952	26.08	NaN	4348.7	30	0	938.77	0.214				-1	MQLPRWCELG	10	43	444.5444641113281	NaN	0	444.5444641113281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))MQLPRWC(Carbamidomethyl (C))ELG_	SGCE|p.W7C|1|0.06|ENSG00000127990|chr7:94656078-94656078|C/A|missense_variant	28.081489160057373	0.40797012399963245	2				NaN	NaN	0	NaN	5722	3228	8951
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8953	26.084	NaN	1832.8	30	0	166.08	0.106	+			35055	SAESHLSY	8	47	447.2038595866959	NaN	0	447.20391845703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAESHLSY_	nc|ENSG00000146166|Q5TDP6-3|LGSN	42.47446043378293	1.7418937515398478	2				NaN	NaN	0	NaN	5723	3228	8951
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8954	26.086	NaN	1183.1	30	0	503.09	0.035	+			51019	YKEKARVI	8	43	503.80541682693257	1005.5962807206652	2	503.8062438964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YKEKARVI_	ENST00000412023.5_1_12:6993487-6993658:+|nuORF;ENST00000421824.1_1_12:6993036-6993658:+|nuORF	38.80614096846853	0.6637206697844082	2				NaN	NaN	0	NaN	5724	3228	8951
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8972	26.122	NaN	2339.7	30	0	1049	0.214	+			47322	VPADTKLSK	9	44	479.78164385821793	957.5487347832359	2	479.7820739746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VPADTKLSK_	ENSG00000113196|ENST00000231121|HAND1;ENSG00000164107|ENST00000359562|HAND2;nc|ENSG00000164107|P61296-2|HAND2	35.61828744233558	0.47037581924408073	2				NaN	NaN	0	NaN	5739	3231	8971
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8973	26.126	NaN	4075.5	30	0	692.98	0.106	+			50613	YEAAATRL	8	53	447.7372486533845	893.459944373569	2	447.7376403808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YEAAATRL_	ENSG00000167004|ENST00000300289|PDIA3;ENST00000434494.5_1_15:44038867-44063413:+|nuORF;ENST00000471856.1_1_1:146649692-146651075:+|nuORF	65.46538089061403	0.44767499471257033	2				NaN	NaN	0	NaN	5740	3231	8971
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8974	26.128	NaN	2079.5	30	0	559.6	0.034			+	9665	ELTLGMKF	8	46	469.7561340332031	NaN	0	469.7561340332031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ELTLGMKF_	REV__ENSG00000144366|ENST00000409830|GULP1;REV__ENST00000496976.1_1_2:189454447-189458735:+|nuORF;REV__nc|ENSG00000144366|Q9UBP9-3|GULP1	40.5726180659479	1.7418937515398478	2				NaN	NaN	0	NaN	5741	3231	8971
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8992	26.163	NaN	3032.7	30	0	1564.9	0.142			+	12677	GEKAPQAVF	9	44	473.75455825029707	945.4945635673942	2	473.7550048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEKAPQAVF_	REV__ENSG00000109436|ENST00000442267|TBC1D9;REV__TBC1D9|p.I1211Sfs*11|1|0.2|ENSG00000109436|chr4:140622366-140622366|G/-|frameshift_variant;REV__TBC1D9|p.N1245Kfs*14|1|0.15|ENSG00000109436|chr4:140622261-140622262|-/T|frameshift_variant	29.14955571784316	0.5308295550522326	2				NaN	NaN	0	NaN	5756	3234	8991
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9010	26.202	NaN	2981.7	30	0	1066.9	0.214	+			35433	SASCTVILK	9	61	489.76740247978745	977.5202520263749	2	489.7680358886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SASC(Carbamidomethyl (C))TVILK_	ENST00000463441.5_1_7:150020319-150023055:+|nuORF;ENST00000493307.1_1_7:150020428-150023055:+|nuORF	60.11826168202944	0.21262886028301267	2				NaN	NaN	0	NaN	5771	3237	9009
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9011	26.205	NaN	1016.6	30	0	80.541	0.106			+	43829	TLSLFTVSIN	10	39	547.8060302734375	NaN	0	547.8060302734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TLSLFTVSIN_	REV__ENSG00000119402|ENST00000608872|FBXW2;REV__nc|ENSG00000119402|Q9UKT8-2|FBXW2	52.936696900407355	0.28703625529470256	2				NaN	NaN	0	NaN	5772	3237	9009
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9012	26.207	NaN	1329.2	30	0	324.85	0.04	+			21061	KKLEDMRRYS	10	33	442.57296568886375	NaN	0	442.239013671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KKLEDMRRYS_	tr|U7SUZ7|U7SUZ7_FUSNUDUF4357domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01067PE=4SV=1	16.006774744331256	0.4201028297492154	2				NaN	NaN	0	NaN	5773	3237	9009
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9030	26.245	NaN	3464.4	30	0	654.56	0.214	+			38147	SQAFPSVSK	9	57	475.7508322448775	949.487111556555	2	475.7507019042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SQAFPSVSK_	ENSG00000095637|ENST00000371247|SORBS1;ENST00000474353.6_1_10:97106208-97250794:-|nuORF;nc|ENSG00000095637|Q9BX66-10|SORBS1;nc|ENSG00000095637|Q9BX66-11|SORBS1;nc|ENSG00000095637|Q9BX66-12|SORBS1;nc|ENSG00000095637|Q9BX66-2|SORBS1;nc|ENSG00000095637|Q9BX66-3|SORBS1;nc|ENSG00000095637|Q9BX66-4|SORBS1;nc|ENSG00000095637|Q9BX66-5|SORBS1;nc|ENSG00000095637|Q9BX66-6|SORBS1;nc|ENSG00000095637|Q9BX66-7|SORBS1;nc|ENSG00000095637|Q9BX66-8|SORBS1;nc|ENSG00000095637|Q9BX66-9|SORBS1;SORBS1|p.A1135Qfs*17|1|0.24|ENSG00000095637|chr10:95336757-95336757|C/-|frameshift_variant	56.632244143249146	0.24168844994051353	2				NaN	NaN	0	NaN	5788	3240	9029
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9031	26.249	NaN	4387.6	30	0	905.88	0.033	+			43951	TPDVARAM	8	57	430.71821881137885	859.4218846895577	2	430.7184753417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TPDVARAM_	ENSG00000167741|ENST00000381550|GGT6;nc|ENSG00000167741|Q6P531-2|GGT6;nc|ENSG00000167741|Q6P531|GGT6	93.19546047674547	0.2677966331495483	2				NaN	NaN	0	NaN	5789	3240	9029
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9066	26.324	NaN	2650.9	30	0	675.83	0.214	+			8696	EEAPSRPAL	9	44	485.2537914101627	968.4930298871254	2	485.25433349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EEAPSRPAL_	nc|ENSG00000173349|Q587I9|SFT2D3	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	5818	3246	9065
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9067	26.327	NaN	2570.3	30	0	445.08	0.106	+			46452	VESKVYAV	8	49	447.75050771103963	893.4864624888793	2	447.7506408691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VESKVYAV_	CPSF1|p.A1319Pfs*42|2|0.23|ENSG00000071894|chr8:144393943-144393943|C/-|frameshift_variant;ENSG00000071894|ENST00000616140|CPSF1	66.42927471994793	0.4381325844043345	2				NaN	NaN	0	NaN	5819	3246	9065
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9068	26.329	NaN	989.2	30	0	302.09	0.034	+			32648	RAAAAALPPA	10	32	454.7700500488281	NaN	0	454.7700500488281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RAAAAALPPA_	ENST00000266671.9_1_12:76425237-76425312:-|nuORF	50.0245360154114	0.30544735986590815	2				NaN	NaN	0	NaN	5820	3246	9065
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9086	26.367	NaN	27452	30	0	5391.1	0.142				-1	 	0	64	483.2501862064266	964.4858194796532	2	483.25018310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5835	3249	9085
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9104	26.406	NaN	3127.9	30	0	376.83	0.214			+	7556	DHTLISVY	8	65	474.2451512562229	946.4757495792459	2	474.2454528808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DHTLISVY_	REV__nc|ENSG00000290649|Q8NH63|OR51H1	50.0245360154114	0.5941082100236891	2				NaN	NaN	0	NaN	5850	3252	9103
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9105	26.409	NaN	2735.9	30	0	446.02	0.106	+			23082	KVVDPFSK	8	43	460.2657105726445	918.516868212089	2	460.2657165527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVVDPFSK_	ENSG00000145425|ENST00000274065|RPS3A;ENST00000507485.1_1_4:152020792-152024033:+|nuORF	60.11826168202944	0.5006107059937851	2				NaN	NaN	0	NaN	5851	3252	9103
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9106	26.411	NaN	3419.4	30	0	1549.3	0.106	+			16858	HPFEDGAKL	9	53	507.2557757360515	1012.496998538903	2	507.25665283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HPFEDGAKL_	ENSG00000178950|ENST00000314167|GAK;ENST00000504435.1_1_4:882633-887812:-|nuORF;GAK|p.L730*|1|0.09|ENSG00000178950|chr4:870772-870772|C/-|frameshift_variant;GAK|p.P1133Lfs*23|1|0.3|ENSG00000178950|chr4:851860-851860|G/-|frameshift_variant;GAK|p.P955Lfs*36|1|0.25|ENSG00000178950|chr4:866964-866964|G/-|frameshift_variant;GAK|p.S905Pfs*40|1|0.15|ENSG00000178950|chr4:867116-867116|G/-|frameshift_variant;GAK|p.V881Gfs*39|1|0.23|ENSG00000178950|chr4:867186-867187|-/C|frameshift_variant;nc|ENSG00000178950|O14976-2|GAK	79.71258880314673	0.09879134589249085	2				NaN	NaN	0	NaN	5852	3252	9103
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9107	26.413	NaN	2463.6	30	0	613	0.033	+			29107	NTPSGTNAL	9	46	437.71661376953125	NaN	0	437.71661376953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NTPSGTNAL_	ENSG00000149187|ENST00000687097|CELF1;nc|ENSG00000149187|Q92879-2|CELF1;nc|ENSG00000149187|Q92879-3|CELF1;nc|ENSG00000149187|Q92879-4|CELF1;nc|ENSG00000149187|Q92879-5|CELF1;nc|ENSG00000149187|Q92879-6|CELF1;nc|ENSG00000149187|Q92879|CELF1	101.25262130126117	0.018912469721856617	2				NaN	NaN	0	NaN	5853	3252	9103
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9125	26.45	NaN	10031	30	0	2921	0.214	+			22164	KSSDFAVLK	9	57	497.78159767140335	993.5486424096067	2	497.7820129394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSSDFAVLK_	ENSG00000103047|ENST00000261778|TANGO6	114.8945686534367	0.024290463251177924	2				NaN	NaN	0	NaN	5868	3255	9124
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9126	26.454	NaN	18622	30	0	8633.7	0.106	+			2733	AQYQFTGIKK	10	65	395.22016236369734	1182.638657691292	3	395.2204284667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AQYQFTGIKK_	ENSG00000173915|ENST00000369815|ATP5MK	68.84614121027924	0.2867470276772903	2				NaN	NaN	0	NaN	5869	3255	9124
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9127	26.456	NaN	2375.4	30	0	1138.2	0.033	+			9438	EKLAQELA	8	44	451.2528348792558	NaN	0	451.2528381347656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EKLAQELA_	ENSG00000130307|ENST00000252597|USHBP1	74.25504064058377	1.7418937515398478	2				NaN	NaN	0	NaN	5870	3255	9124
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9145	26.491	NaN	1462.8	30	0	278.06	0.214	+			41449	SVNLTAPQGA	10	31	479.2533264160156	NaN	0	479.2533264160156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVNLTAPQGA_	ENST00000374165.5_1_9:116172982-116173105:+|nuORF	38.753607047826485	0.3729281687199363	2				NaN	NaN	0	NaN	5885	3258	9144
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9146	26.495	NaN	7720.8	30	0	3347.6	0.106	+			31047	QEVVDGKVV	9	56	486.77123561552366	971.5279182978474	2	486.77117919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QEVVDGKVV_	CON__P35900;ENSG00000171431|ENST00000167588|KRT20;KRT20|p.V404M|1|0.22|ENSG00000171431|chr17:40876426-40876426|C/T|missense_variant	96.0336014099291	0.047854655524928534	2				NaN	NaN	0	NaN	5886	3258	9144
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9147	26.497	NaN	1349.4	30	0	341.63	0.035	+			5434	ATYPMPTAK	9	31	490.2491037536359	978.4836545740718	2	490.24957275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATYPMPTAK_	ANKRD17|p.L2249Yfs*84|1|0.34|ENSG00000132466|chr4:73090884-73090884|G/-|frameshift_variant;ENSG00000132466|ENST00000358602|ANKRD17;nc|ENSG00000132466|O75179-2|ANKRD17;nc|ENSG00000132466|O75179-4|ANKRD17;nc|ENSG00000132466|O75179-6|ANKRD17;nc|ENSG00000132466|O75179-7|ANKRD17	24.519189625965996	0.574102787014149	2				NaN	NaN	0	NaN	5887	3258	9144
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9165	26.533	NaN	4085	30	0	1526.3	0.214	+			16747	HLQKGKAPA	9	56	475.2819922311923	948.5494315291846	2	475.28253173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HLQKGKAPA_	ENSG00000175445|ENST00000650287|LPL	38.80614096846853	0.43426287593479557	2				NaN	NaN	0	NaN	5902	3261	9164
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9166	26.537	NaN	3245.8	30	0	407.8	0.036	+			38044	SPQPDGKVVY	10	57	545.2819187382952	1088.5492845433903	2	545.2826538085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SPQPDGKVVY_	ENSG00000170892|ENST00000396388|TSEN34	81.52500206392136	0.18316182710238588	2				NaN	NaN	0	NaN	5903	3261	9164
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9184	26.574	NaN	24038	30	0	6108.8	0.214	+			27046	MAAAAFAEK	9	74	455.22804713030195	908.4415413274039	2	455.2283020019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MAAAAFAEK_	ENSG00000101166|ENST00000355937|PRELID3B;nc|ENSG00000101166|Q9Y3B1-2|PRELID3B	115.49404669440601	0.023927554121326553	2				NaN	NaN	0	NaN	5918	3264	9183
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9185	26.578	NaN	2528.6	30	0	426.31	0.106	+			22733	KVAVVLIQK	9	64	499.3415411748234	996.6685294164469	2	499.3419189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVAVVLIQK_	ENSG00000168538|ENST00000334690|TRAPPC11;ENST00000509857.5_1_4:184585182-184595983:+|nuORF;nc|ENSG00000168538|Q7Z392-3|TRAPPC11;nc|ENSG00000168538|Q7Z392-4|TRAPPC11;TRAPPC11|p.T366Pfs*9|1|0.25|ENSG00000168538|chr4:183680246-183680246|A/-|frameshift_variant	117.81106730687013	0.02252488733980868	2				NaN	NaN	0	NaN	5919	3264	9183
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9186	26.58	NaN	3019.5	30	0	576.77	0.106	+			28859	NPVVRSKS	8	57	443.7588263969691	885.5030998607382	2	443.7587585449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NPVVRSKS_	ENSG00000186654|ENST00000336985|PRR5;ENST00000455389.3_1_22:45126703-45133124:+|nuORF;ENST00000495017.5_1_22:45127230-45133124:+|nuORF;nc|ENSG00000186654|P85299-2|PRR5;nc|ENSG00000186654|P85299-3|PRR5;nc|ENSG00000186654|P85299-4|PRR5;nc|ENSG00000186654|P85299-5|PRR5	38.80614096846853	0.6637206697844082	2				NaN	NaN	0	NaN	5920	3264	9183
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9187	26.582	NaN	11409	30	0	4419.2	0.106	+			14075	GSLDQVLKK	9	44	329.8655415923218	986.5747953771654	3	329.8658142089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GSLDQVLKK_	ENSG00000169032|ENST00000307102|MAP2K1;ENST00000425818.2_1_15:66679685-66737158:+|nuORF;MAP2K1|p.A284Gfs*2|1|0.06|ENSG00000169032|chr15:66485144-66485145|-/T|frameshift_variant	32.81241826257853	0.4965981579233955	2				NaN	NaN	0	NaN	5921	3264	9183
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9188	26.583	NaN	2750	30	0	663.61	0.106			+	44602	TTDRPTIV	8	51	451.7504480085645	901.486343083929	2	451.7503967285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TTDRPTIV_	REV__ENSG00000017260|ENST00000510168|ATP2C1;REV__nc|ENSG00000017260|P98194-2|ATP2C1;REV__nc|ENSG00000017260|P98194-3|ATP2C1;REV__nc|ENSG00000017260|P98194-4|ATP2C1;REV__nc|ENSG00000017260|P98194-5|ATP2C1;REV__nc|ENSG00000017260|P98194-6|ATP2C1;REV__nc|ENSG00000017260|P98194-7|ATP2C1;REV__nc|ENSG00000017260|P98194-8|ATP2C1;REV__nc|ENSG00000017260|P98194-9|ATP2C1	45.9519527083369	0.6193794311207887	2				NaN	NaN	0	NaN	5922	3264	9183
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9189	26.585	NaN	2833.1	30	0	1529.8	0.037			+	23103	KVVGIFPIFK	10	37	383.2448929707744	NaN	0	383.2449951171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KVVGIFPIFK_	REV__ENSG00000175115|ENST00000320580|PACS1;REV__nc|ENSG00000175115|Q6VY07-2|PACS1	35.15202426646627	0.38475398474706135	2				NaN	NaN	0	NaN	5923	3264	9183
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9190	26.586	NaN	3237.5	30	0	1548	0.141			+	-1	SVKLLEMAR	9	40	354.8701131916308	1061.5885101750926	3	354.8707580566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_SVKLLEM(Oxidation (M))AR_	REV__ENSG00000130255|ENST00000347512|RPL36;REV__ENST00000306634.3_1_9:111389208-111389427:+|nuORF	31.529811441608018	0.5085848003137583	2				NaN	NaN	0	NaN	5924	3264	9183
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9208	26.625	NaN	56013	30	0	42173	0.214				-1	 	0	57	322.1933309165816	642.3721088999632	2	322.19354248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5939	3267	9207
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9209	26.629	NaN	6705.6	30	0	3305.9	0.106	+			47356	VPEEKAAEL	9	62	493.26337083901	984.51218874482	2	493.2633972167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VPEEKAAEL_	ENSG00000036054|ENST00000394144|TBC1D23;ENST00000484231.1_1_3:99998514-100002656:+|nuORF;ENST00000486274.5_1_3:99980342-100042509:+|nuORF;nc|ENSG00000036054|Q9NUY8-2|TBC1D23;TBC1D23|p.A351Ifs*23|1|0.05|ENSG00000036054|chr3:100299289-100299290|-/ATTCACA|frameshift_variant	88.17693792209575	0.07000514020414955	2				NaN	NaN	0	NaN	5940	3267	9207
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9210	26.631	NaN	1312.4	30	0	171.98	0.035	+			33421	RIIDVSTVK	9	44	515.8155882552614	1029.6166235773228	2	515.8165283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RIIDVSTVK_	ENSG00000076043|ENST00000265881|REXO2;ENST00000538403.5_1_11:114314877-114320694:+|nuORF;ENST00000538791.3_1_11:114315223-114320694:+|nuORF;ENST00000539333.5_1_11:114316741-114316810:+|nuORF;ENST00000539788.5_1_11:114314891-114320694:+|nuORF;ENST00000543131.5_1_11:114310234-114320694:+|nuORF;nc|ENSG00000076043|Q9Y3B8-2|REXO2;nc|ENSG00000076043|Q9Y3B8-3|REXO2;REXO2|p.I219Nfs*3|1|0.39|ENSG00000076043|chr11:114449909-114449910|-/A|frameshift_variant	47.95952297671804	0.32689736945648856	2				NaN	NaN	0	NaN	5941	3267	9207
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9228	26.668	NaN	4558.8	30	0	604.65	0.214	+			16503	HEVAKQLDL	9	66	526.7896769757368	1051.5648010182736	2	526.7916259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HEVAKQLDL_	ENSG00000048828|ENST00000277165|FAM120A;FAM120A|p.V551Sfs*6|1|0.21|ENSG00000048828|chr9:93529491-93529491|C/-|frameshift_variant;nc|ENSG00000048828|Q9NZB2-2|FAM120A;nc|ENSG00000048828|Q9NZB2-4|FAM120A;nc|ENSG00000048828|Q9NZB2-5|FAM120A;nc|ENSG00000048828|Q9NZB2-6|FAM120A	150.36159442982594	0.006784847064083231	2				NaN	NaN	0	NaN	5956	3270	9227
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9229	26.671	NaN	590.27	30	0	83.18	0.106	+			16347	HELIITKC	8	39	478.7649609867115	955.515369040223	2	478.76531982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HELIITKC_	ENSG00000171132|ENST00000306156|PRKCE	42.396135135203025	0.6414440140393314	2				NaN	NaN	0	NaN	5957	3270	9227
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9230	26.673	NaN	1296.8	30	0	259.08	0.106	+			5798	AVIDSGVCR	9	52	460.2369916562879	NaN	0	460.2366638183594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVIDSGVCR_	ENSG00000025800|ENST00000373625|KPNA6;ENSG00000196911|ENST00000368564|KPNA5	56.72105179125745	0.16330365735109603	2				NaN	NaN	0	NaN	5958	3270	9227
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9231	26.675	NaN	743.75	30	0	292.37	0.034	+			12863	GEQLLKQM	8	31	473.7552490234375	NaN	0	473.7552490234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEQLLKQM_	ENSG00000164532|ENST00000408931|TBX20;ENST00000492961.1_1_7:35271114-35293240:-|nuORF;TBX20|p.D326Mfs*40|1|0.28|ENSG00000164532|chr7:35204497-35204497|C/-|frameshift_variant	60.97194046774394	1.7418937515398478	2				NaN	NaN	0	NaN	5959	3270	9227
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9249	26.713	NaN	5892.1	30	0	2182.5	0.214	+			25311	LPAPSGIGH	9	53	424.7347453681304	847.4549378030608	2	424.734619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LPAPSGIGH_	ENST00000502922.5_1_5:176882475-176882797:+|nuORF	83.28718786952967	0.08379093283639245	2				NaN	NaN	0	NaN	5974	3273	9248
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9250	26.716	NaN	1756	30	0	145.69	0.106	+			38108	SPVQVKTAY	9	56	496.7742919921875	NaN	0	496.7742919921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SPVQVKTAY_	ENSG00000225830|ENST00000355832|ERCC6	88.17693792209575	0.04527150213038833	2				NaN	NaN	0	NaN	5975	3273	9248
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9251	26.718	NaN	563.21	30	0	146.4	0.035	+			16686	HISDVVLDK	9	30	513.284761534165	NaN	0	513.2841796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HISDVVLDK_	EIF4G1|p.P1229Qfs*2|1|0.18|ENSG00000114867|chr3:184327606-184327606|C/-|frameshift_variant;ENSG00000114867|ENST00000346169|EIF4G1;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1	51.19269402634007	0.19847346126499396	2				NaN	NaN	0	NaN	5976	3273	9248
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9269	26.756	NaN	4842.8	30	0	646.97	0.214	+			21383	KMKMLGPFT	9	68	526.7829110603091	1051.551269187418	2	526.7847900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KMKMLGPFT_	ENSG00000164484|ENST00000296978|TMEM200A;TMEM200A|p.F288Lfs*5|1|0.36|ENSG00000164484|chr6:130441283-130441283|T/-|frameshift_variant	60.97194046774394	0.20551255781574032	2				NaN	NaN	0	NaN	5991	3276	9268
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9270	26.759	NaN	7926.3	30	0	4105.6	0.106				-1	 	0	49	329.1830624349431	656.3515719366862	2	329.1832580566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5992	3276	9268
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9271	26.761	NaN	2287.4	30	0	837.66	0.106				-1	 	0	31	364.20407289542345	726.3935928576469	2	364.2041931152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5993	3276	9268
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9272	26.763	NaN	9067.2	30	0	2917	0.106	+			8543	EAVKPTVGM	9	58	466.24920707933575	930.4838612254715	2	466.249755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EAVKPTVGM_	ENSG00000164323|ENST00000458385|CFAP97	125.81401957644128	0.01768009863045738	2				NaN	NaN	0	NaN	5994	3276	9268
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9273	26.765	NaN	1016.3	30	0	332.57	0.035	+			11119	FFRTDSQL	8	39	507.2557757360515	1012.496998538903	2	507.2557373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FFRTDSQL_	ENSG00000189164|ENST00000436120|ZNF527;nc|ENSG00000189164|Q8NB42-2|ZNF527	52.29916861842294	0.578018602984656	2				NaN	NaN	0	NaN	5995	3276	9268
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9291	26.803	NaN	1942.8	30	0	439.27	0.214	+			10378	EVAKVIVSM	9	47	496.2783982896074	NaN	0	496.2782287597656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_EVAKVIVSM(Oxidation (M))_	AKAP9|p.Q3083Nfs*28|1|0.15|ENSG00000127914|chr7:92089389-92089390|-/TGAATATCAAGCAGCTATGGAATGCC|frameshift_variant;AKAP9|p.T1942Lfs*3|3|0.18|ENSG00000127914|chr7:92062328-92062328|A/-|frameshift_variant;ENSG00000127914|ENST00000356239|AKAP9;ENST00000493453.1_1_7:91570251-91670224:+|nuORF;nc|ENSG00000127914|Q99996-1|AKAP9;nc|ENSG00000127914|Q99996-3|AKAP9;nc|ENSG00000127914|Q99996-4|AKAP9;nc|ENSG00000127914|Q99996-5|AKAP9;nc|ENSG00000127914|Q99996-6|AKAP9	107.00750918261382	0.012399597248013027	2				NaN	NaN	0	NaN	6010	3279	9290
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9292	26.806	NaN	1823.2	30	0	352.51	0.106	+			44322	TSFRDTSL	8	36	463.73252605071195	925.4504991682239	2	463.73211669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TSFRDTSL_	ENSG00000204764|ENST00000523189|RANBP17;ENST00000443155.5_1_5:170288887-170338173:+|nuORF;ENST00000519130.5_1_5:170289037-170336799:+|nuORF;nc|ENSG00000204764|Q9H2T7-2|RANBP17;RANBP17|p.N641Tfs*35|2|0.1|ENSG00000204764|chr5:171183218-171183218|A/-|frameshift_variant	55.50420428727701	0.5462892107279674	2				NaN	NaN	0	NaN	6011	3279	9290
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9293	26.808	NaN	973.22	30	0	120.29	0.034	+			42370	TAINASRAL	9	45	458.7640522981686	NaN	0	458.76373291015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TAINASRAL_	ENSG00000174373|ENST00000680220|RALGAPA1;ENST00000443361.1_1_9:108287470-108288637:+|nuORF;nc|ENSG00000174373|Q6GYQ0-2|RALGAPA1;nc|ENSG00000174373|Q6GYQ0-5|RALGAPA1;nc|ENSG00000174373|Q6GYQ0-6|RALGAPA1;nc|ENSG00000174373|Q6GYQ0-7|RALGAPA1;nc|ENSG00000174373|Q6GYQ0|RALGAPA1	32.75053402867276	0.3122164853807509	2				NaN	NaN	0	NaN	6012	3279	9290
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9329	26.885	NaN	1640.6	30	0	295.78	0.141			+	842	AEGLALRAP	9	31	449.26130402627945	896.5080551193589	2	449.2615966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEGLALRAP_	REV__ENSG00000183530|ENST00000327423|PRR14L;REV__nc|ENSG00000183530|Q5THK1-2|PRR14L;REV__nc|ENSG00000183530|Q5THK1-4|PRR14L	40.77816245573522	0.41113185337114944	2				NaN	NaN	0	NaN	6042	3285	9328
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9347	26.924	NaN	1330.1	30	0	342.48	0.214			+	20244	KELVTKLS	8	53	459.28678889773425	NaN	0	459.2871398925781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KELVTKLS_	REV__ENSG00000151503|ENST00000534548|NCAPD3;REV__ENST00000525964.6_1_11:134022841-134052943:-|nuORF;REV__NCAPD3|p.N1215S|1|0.12|ENSG00000151503|chr11:134161821-134161821|T/C|missense_variant	49.44154591367651	1.7418937515398478	2				NaN	NaN	0	NaN	6057	3288	9346
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9348	26.927	NaN	4029.4	30	0	1360.5	0.106	+			5017	ATSDKKKKTEA	11	31	402.8944633553058	1205.6615606661173	3	402.89501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATSDKKKKTEA_	ENSG00000060749|ENST00000650167|QSER1;nc|ENSG00000060749|Q2KHR3-2|QSER1;nc|ENSG00000060749|Q2KHR3|QSER1;QSER1|p.I1584*|1|0.24|ENSG00000060749|chr11:32969069-32969069|A/-|frameshift_variant;QSER1|p.K1503Nfs*38|1|0.3|ENSG00000060749|chr11:32958008-32958008|A/-|frameshift_variant	24.231819034082204	0.7356191775841856	2				NaN	NaN	0	NaN	6058	3288	9346
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9349	26.929	NaN	1470.5	30	0	270	0.035	+			5435	ATYPMPTAK	9	39	490.2491037536359	978.4836545740718	2	490.2489318847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATYPMPTAK_	ANKRD17|p.L2249Yfs*84|1|0.34|ENSG00000132466|chr4:73090884-73090884|G/-|frameshift_variant;ENSG00000132466|ENST00000358602|ANKRD17;nc|ENSG00000132466|O75179-2|ANKRD17;nc|ENSG00000132466|O75179-4|ANKRD17;nc|ENSG00000132466|O75179-6|ANKRD17;nc|ENSG00000132466|O75179-7|ANKRD17	29.170058357718403	0.5306379469863586	2				NaN	NaN	0	NaN	6059	3288	9346
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9367	26.966	NaN	4803.1	30	0	813.56	0.214	+			27526	MPADTNKAF	9	70	497.7363489858437	993.4581450384874	2	497.7367858886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MPADTNKAF_	ENSG00000125037|ENST00000245046|EMC3;ENST00000487465.5_1_3:10011273-10028351:-|nuORF;nc|ENSG00000125037|Q9P0I2-2|EMC3	77.31757898189308	0.1091473830098891	2				NaN	NaN	0	NaN	6074	3291	9366
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9368	26.97	NaN	2258.5	30	0	230.91	0.106	+			34608	RVPLAIVNK	9	61	505.32976626850996	NaN	0	505.3301086425781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RVPLAIVNK_	DYNC1H1|p.F2635Lfs*67|1|0.16|ENSG00000197102|chr14:102017141-102017141|T/-|frameshift_variant;DYNC1H1|p.G1902Vfs*27|2|0.27|ENSG00000197102|chr14:102006154-102006154|G/-|frameshift_variant;DYNC1H1|p.K3112Hfs*3|1|0.31|ENSG00000197102|chr14:102027998-102027999|-/TCACAAG|frameshift_variant;DYNC1H1|p.W4201Gfs*43|1|0.42|ENSG00000197102|chr14:102043958-102043958|G/-|frameshift_variant;ENSG00000197102|ENST00000360184|DYNC1H1	90.36981228632155	0.04085092656593507	2				NaN	NaN	0	NaN	6075	3291	9366
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9369	26.972	NaN	2990.5	30	0	1025.4	0.034	+			18053	IIVDPTTGK	9	49	472.2759477934659	942.5373426537318	2	472.2764587402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IIVDPTTGK_	ENSG00000145632|ENST00000274289|PLK2;ENST00000504196.1_1_5:57754793-57755897:-|nuORF;ENST00000514306.1_1_5:57754443-57755636:-|nuORF;PLK2|p.E130*|1|0.03|ENSG00000145632|chr5:58458832-58458833|-/A|frameshift_variant;PLK2|p.E130Vfs*4|1|0.05|ENSG00000145632|chr5:58458831-58458832|-/GAGAA|frameshift_variant	44.377184641726394	0.36891676396732553	2				NaN	NaN	0	NaN	6076	3291	9366
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9421	27.085	NaN	2125.2	30	0	364.28	0.143	+			16476	HETIRVAVC	9	47	514.2711321074642	1026.5277112817282	2	514.2721557617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HETIRVAVC_	ENSG00000159202|ENST00000360943|UBE2Z;ENST00000513342.5_1_17:46990150-47004493:+|nuORF;nc|ENSG00000159202|Q9H832-2|UBE2Z	76.7741389293348	0.11149722112137898	2				NaN	NaN	0	NaN	6119	3300	9420
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9439	27.124	NaN	4283.9	30	0	506.29	0.214	+			1511	AGAAVLPVK	9	47	413.26291772884355	824.5112825244871	2	413.26300048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AGAAVLPVK_	ENSG00000178691|ENST00000322652|SUZ12	106.41520541750704	0.03265588207292361	2				NaN	NaN	0	NaN	6134	3303	9438
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9440	27.128	NaN	4240.8	30	0	1710.4	0.106			+	-1	PMCPGPPSP	9	51	470.2063619369397	NaN	0	470.20635986328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_PMC(Carbamidomethyl (C))PGPPSP_	REV__ENSG00000221829|ENST00000378643|FANCG	33.51558372728122	0.30835390848773375	2				NaN	NaN	0	NaN	6135	3303	9438
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9441	27.13	NaN	1369.7	30	0	564.51	0.035	+			31034	QEVASKAAVL	10	41	508.29254150390625	NaN	0	508.29254150390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QEVASKAAVL_	ENSG00000170185|ENST00000307017|USP38;nc|ENSG00000170185|Q8NB14-2|USP38;USP38|p.K823Nfs*2|1|0.24|ENSG00000170185|chr4:143214440-143214440|A/-|frameshift_variant;USP38|p.L816Hfs*13|1|0.05|ENSG00000170185|chr4:143214419-143214420|-/ATCATATGAAA|frameshift_variant	56.43379154798735	0.2634004003759929	2				NaN	NaN	0	NaN	6136	3303	9438
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9459	27.168	NaN	2678.4	30	0	395.87	0.142	+			30666	QAVQATAQM	9	48	474.2337938321809	946.4530347311618	2	474.23455810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QAVQATAQM_	ENSG00000071243|ENST00000315870|ING3	80.45461616416974	0.09558281504443908	2				NaN	NaN	0	NaN	6151	3306	9458
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9477	27.207	NaN	54879	30	0	13734	0.214	+			34265	RTIAPIIGR	9	106	498.81871933922713	995.6228857452543	2	498.8188781738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTIAPIIGR_	CDC5L|p.K219Sfs*24|1|0.25|ENSG00000096401|chr6:44403919-44403919|A/-|frameshift_variant;CDC5L|p.K271Nfs*4|1|0.18|ENSG00000096401|chr6:44406376-44406377|-/C|frameshift_variant;CDC5L|p.Q359Cfs*22|1|0.06|ENSG00000096401|chr6:44408614-44408615|-/TG|frameshift_variant;CDC5L|p.Y225Mfs*18|1|0.1|ENSG00000096401|chr6:44403938-44403938|T/-|frameshift_variant;ENSG00000096401|ENST00000371477|CDC5L	120.30596017624542	0.02101454110788768	2				NaN	NaN	0	NaN	6166	3309	9476
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9478	27.21	NaN	2092.7	30	0	287.78	0.041			+	31899	QQFWQVKPNKK	11	54	477.60345458984375	NaN	0	477.60345458984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QQFWQVKPNKK_	REV__ENSG00000115257|ENST00000300954|PCSK4;REV__ENST00000441747.6_1_19:1482426-1490130:-|nuORF;REV__ENST00000586616.5_1_19:1483766-1490130:-|nuORF;REV__ENST00000588195.5_1_19:1483001-1490375:-|nuORF	48.601550744091256	0.32536291591840966	2				NaN	NaN	0	NaN	6167	3309	9476
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9496	27.247	NaN	3203.2	30	0	809.39	0.214	+			31728	QPAENVNQY	9	49	531.7456968341698	1061.4768407351396	2	531.7466430664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QPAENVNQY_	ENSG00000130985|ENST00000335972|UBA1;nc|ENSG00000130985|P22314-2|UBA1	90.36981228632155	0.0638227155548745	2				NaN	NaN	0	NaN	6182	3312	9495
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9497	27.251	NaN	2892.6	30	0	329.63	0.106	+			16199	HEAVKAIAL	9	53	476.28421925535184	950.5538855775037	2	476.2846984863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HEAVKAIAL_	ENSG00000054793|ENST00000338821|ATP9A;nc|ENSG00000054793|O75110-2|ATP9A	110.11987700582712	0.028875675806141952	2				NaN	NaN	0	NaN	6183	3312	9495
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9498	27.253	NaN	1645.5	30	0	408.25	0.106	+			15916	HAAVPTPGY	9	35	456.73193860370674	911.4493242742135	2	456.7315673828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HAAVPTPGY_	ENSG00000162654|ENST00000355754|GBP4	42.47446043378293	0.39123495718708534	2				NaN	NaN	0	NaN	6184	3312	9495
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9499	27.255	NaN	2000.5	30	0	443.17	0.037	+			49423	VVVCCLIFLL	10	33	374.5551452636719	NaN	0	374.5551452636719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVVCCLIFLL_	ENST00000463593.6_1_9:95060120-95060712:-|nuORF	31.529811441608018	0.39664753963064203	2				NaN	NaN	0	NaN	6185	3312	9495
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9517	27.292	NaN	4389.6	30	0	708.06	0.141	+			37350	SLEVKASK	8	57	431.25540732000553	860.4962617068111	2	431.2554931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLEVKASK_	EEA1|p.N1389Mfs*3|1|0.33|ENSG00000102189|chr12:92776081-92776081|T/-|frameshift_variant;ENSG00000102189|ENST00000322349|EEA1	39.252832667884924	0.6609488554722044	2				NaN	NaN	0	NaN	6200	3315	9516
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9535	27.331	NaN	11038	30	0	1072.3	0.215	+			34813	RYLEKSGVL	9	79	532.807939648365	1063.60132636353	2	532.8098754882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RYLEKSGVL_	ENSG00000214114|ENST00000397572|MYCBP;ENST00000495043.5_1_1:39330344-39338774:-|nuORF	78.26377905018397	0.10505600812668463	2				NaN	NaN	0	NaN	6215	3318	9534
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9536	27.335	NaN	7538.1	30	0	1200.5	0.106	+			34902	SAADVVVVH	9	55	448.745193879197	895.475834825194	2	448.74566650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAADVVVVH_	ACAA1|p.L369Wfs*7|1|0.31|ENSG00000060971|chr3:38125659-38125659|G/-|frameshift_variant;ENSG00000060971|ENST00000333167|ACAA1;ENST00000484284.5_1_3:38175441-38178607:-|nuORF;ENST00000489559.1_1_3:38175990-38178538:-|nuORF;nc|ENSG00000060971|P09110-2|ACAA1	106.41520541750704	0.03265588207292361	2				NaN	NaN	0	NaN	6216	3318	9534
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9537	27.337	NaN	8839.3	30	0	578.5	0.106	+			16130	HEADKTYML	9	76	554.2600150348891	1106.505477136578	2	554.2623901367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HEADKTYML_	ENSG00000143155|ENST00000367833|TIPRL	101.25262130126117	0.03792372629710479	2				NaN	NaN	0	NaN	6217	3318	9534
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9538	27.339	NaN	1616.4	30	0	259.36	0.035			+	9656	ELSLRVLSK	9	61	522.8236739195132	1043.6327949058264	2	522.8253173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ELSLRVLSK_	REV__ENSG00000165516|ENST00000298307|KLHDC2	51.19269402634007	0.2889735674168909	2				NaN	NaN	0	NaN	6218	3318	9534
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9556	27.376	NaN	2312.8	30	0	395.39	0.214	+			35194	SAISSPLTK	9	50	452.2606326461893	902.5067123591787	2	452.26055908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAISSPLTK_	AKAP13|p.S1688C|1|0.06|ENSG00000170776|chr15:85669792-85669792|C/G|missense_variant;AKAP13|p.T2400Nfs*3|1|0.33|ENSG00000170776|chr15:85730617-85730618|-/C|frameshift_variant;ENSG00000170776|ENST00000394518|AKAP13;nc|ENSG00000170776|Q12802-2|AKAP13;nc|ENSG00000170776|Q12802-4|AKAP13	56.43379154798735	0.2433427591689151	2				NaN	NaN	0	NaN	6233	3321	9555
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9557	27.38	NaN	1241.3	30	0	219.62	0.034	+			44081	TPTGIKVVM	9	36	481.27259055635983	960.5306281795197	2	481.7744445800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_TPTGIKVVM(Oxidation (M))_	ENSG00000170043|ENST00000303731|TRAPPC1	74.25504064058377	0.12238981753128622	2				NaN	NaN	0	NaN	6234	3321	9555
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9575	27.417	NaN	18314	30	0	3113.9	0.214			+	-1	KRFDRCPCLRR	11	67	521.9418290732211	1562.8036578198632	3	521.9429931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_KRFDRC(Carbamidomethyl (C))PC(Carbamidomethyl (C))LRR_	REV__ENSG00000167889|ENST00000569840|MGAT5B;REV__ENST00000563153.5_1_17:74940311-74944917:+|nuORF;REV__ENST00000568598.1_1_17:74942385-74944917:+|nuORF;REV__nc|ENSG00000167889|Q3V5L5-2|MGAT5B;REV__nc|ENSG00000167889|Q3V5L5-5|MGAT5B	21.780426970141523	0.7613322811393133	2				NaN	NaN	0	NaN	6249	3324	9574
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9576	27.421	NaN	691.54	30	0	89.697	0.038	+			34683	RVSTEVTLAVK	11	36	601.8592557492558	NaN	0	601.859130859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RVSTEVTLAVK_	ENSG00000211456|ENST00000389061|SACM1L;ENST00000438671.3_1_3:45731844-45750997:+|nuORF;ENST00000445499.2_1_3:45730957-45754662:+|nuORF;ENST00000463237.5_1_3:45730948-45754703:+|nuORF;ENST00000463347.5_1_3:45730948-45748420:+|nuORF;SACM1L|p.N346Ifs*2|1|0.35|ENSG00000211456|chr3:45732084-45732084|A/-|frameshift_variant	45.764366957710365	0.3457406293823867	2				NaN	NaN	0	NaN	6250	3324	9574
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9594	27.458	NaN	5008	30	0	2397.7	0.214	+			47445	VPVAKTAEL	9	58	464.278950335971	926.543347738742	2	464.2791748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VPVAKTAEL_	ENSG00000124789|ENST00000262077|NUP153;nc|ENSG00000124789|P49790-2|NUP153;nc|ENSG00000124789|P49790-3|NUP153;NUP153|p.E1073Kfs*44|1|0.07|ENSG00000124789|chr6:17628983-17628983|T/-|frameshift_variant	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	6265	3327	9593
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9595	27.462	NaN	990.08	30	0	290.06	0.033	+			18201	IMSDGKIV	8	37	431.73840602106236	NaN	0	431.73876953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IMSDGKIV_	tr|U7SWZ0|U7SWZ0_FUSNUMethionineimportATP-bindingproteinMetNOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01221PE=4SV=1	47.91560031466742	1.7418937515398478	2				NaN	NaN	0	NaN	6266	3327	9593
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9613	27.499	NaN	134840	30	0	96860	0.214				-1	 	0	52	343.1985221123092	684.3824912914184	2	343.1988525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6281	3330	9612
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9614	27.502	NaN	1851	30	0	521.57	0.035	+			31826	QPQSSSPVY	9	46	496.73733824435743	991.4601235555149	2	496.7379150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QPQSSSPVY_	ENSG00000089159|ENST00000637617|PXN;nc|ENSG00000089159|P49023-2|PXN;nc|ENSG00000089159|P49023-3|PXN;nc|ENSG00000089159|P49023|PXN;PXN|p.P328Rfs*18|1|0.42|ENSG00000089159|chr12:120215229-120215229|C/-|frameshift_variant	34.172542307311794	0.4838870758800184	2				NaN	NaN	0	NaN	6282	3330	9612
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9632	27.54	NaN	4000.6	30	0	3097.5	0.214				-1	 	0	19	243.14651532889215	NaN	0	243.14649963378906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6297	3333	9631
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9633	27.543	NaN	1115.1	30	0	248.09	0.106			+	37194	SKAYNIEQ	8	42	476.7391681990384	951.4637834648768	2	476.7399597167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SKAYNIEQ_	REV__ENSG00000048707|ENST00000620676|VPS13D;REV__nc|ENSG00000048707|Q5THJ4-2|VPS13D	30.317721548370564	0.7252424349988982	2				NaN	NaN	0	NaN	6298	3333	9631
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9634	27.545	NaN	538.17	30	0	76.286	0.034			+	9383	EKEAAAVLK	9	33	479.7819208344384	NaN	0	479.781982421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EKEAAAVLK_	REV__ENSG00000163012|ENST00000295131|ZSWIM2;REV__ZSWIM2|p.K482Nfs*2|2|0.2|ENSG00000163012|chr2:186828440-186828440|T/-|frameshift_variant	24.519189625965996	0.35377483217337163	2				NaN	NaN	0	NaN	6299	3333	9631
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9652	27.582	NaN	1063.1	30	0	179.11	0.143	+			17566	IEAEKVAQV	9	41	493.77935791015625	NaN	0	493.77935791015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IEAEKVAQV_	ENSG00000147475|ENST00000519638|ERLIN2	54.722347961057174	0.17414871455573902	2				NaN	NaN	0	NaN	6314	3336	9651
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9670	27.62	NaN	6521.3	30	0	2496.4	0.214	+			16778	HPAAKMIVM	9	59	499.2691766940464	996.5238004548928	2	499.26959228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HPAAKMIVM_	ENSG00000156261|ENST00000286788|CCT8;ENST00000484403.5_1_21:30439206-30445917:-|nuORF;nc|ENSG00000156261|P50990-2|CCT8;nc|ENSG00000156261|P50990-3|CCT8	57.81127852772723	0.2318599694398087	2				NaN	NaN	0	NaN	6329	3339	9669
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9671	27.624	NaN	2363.1	30	0	1223.7	0.106	+			35587	SAYQNHLILK	10	34	396.22390096532587	NaN	0	396.2238464355469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAYQNHLILK_	ENSG00000160746|ENST00000292246|ANO10;nc|ENSG00000160746|Q9NW15-2|ANO10;nc|ENSG00000160746|Q9NW15-3|ANO10;nc|ENSG00000160746|Q9NW15-4|ANO10;nc|ENSG00000160746|Q9NW15-5|ANO10	30.503639358989545	0.4000169810673414	2				NaN	NaN	0	NaN	6330	3339	9669
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9672	27.626	NaN	592.58	30	0	129.96	0.034	+			15917	HAAVPTPGY	9	25	456.73248291015625	NaN	0	456.73248291015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HAAVPTPGY_	ENSG00000162654|ENST00000355754|GBP4	24.20275056022122	0.35506675290109213	2				NaN	NaN	0	NaN	6331	3339	9669
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9690	27.664	NaN	2067.5	30	0	957.7	0.142	+			48804	VVADISVAK	9	36	451.27111538406285	900.5276778349257	2	451.27166748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVADISVAK_	ENSG00000197894|ENST00000296412|ADH5;ENST00000508511.5_1_4:99997418-100009857:-|nuORF;ENST00000512621.5_1_4:99993722-100006301:-|nuORF	65.46538089061403	0.16805504838372562	2				NaN	NaN	0	NaN	6346	3342	9689
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9708	27.702	NaN	2624.5	30	0	471.85	0.214			+	47280	VMVMYVDI	8	55	485.24225210731225	968.4699512814245	2	485.2430725097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VMVMYVDI_	REV__ENSG00000065361|ENST00000267101|ERBB3;REV__ENSG00000178568|ENST00000342788|ERBB4;REV__ENST00000548709.1_1_12:56490921-56492754:+|nuORF;REV__ERBB3|p.R1080Vfs*22|1|0.14|ENSG00000065361|chr12:56101093-56101093|C/-|frameshift_variant;REV__ERBB4|p.N1177Mfs*27|1|0.33|ENSG00000178568|chr2:211384012-211384012|T/-|frameshift_variant;REV__nc|ENSG00000065361|P21860-4|ERBB3;REV__nc|ENSG00000065361|P21860-5|ERBB3;REV__nc|ENSG00000178568|Q15303-2|ERBB4;REV__nc|ENSG00000178568|Q15303-3|ERBB4;REV__nc|ENSG00000178568|Q15303-4|ERBB4	46.76643321282427	0.6143254112625767	2				NaN	NaN	0	NaN	6361	3345	9707
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9709	27.706	NaN	2399.3	30	0	439.88	0.106				-1	HCILMNDV	8	51	480.7168154395448	959.4190779458896	2	480.71783447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_HCILM(Oxidation (M))NDV_	FBXO33|p.F425C|1|0.29|ENSG00000165355|chr14:39401298-39401298|A/C|missense_variant	47.91560031466742	0.6071945918984287	2				NaN	NaN	0	NaN	6362	3345	9707
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9710	27.708	NaN	1153.6	30	0	169.5	0.106				-1	NKLIMAKKK	9	36	545.3422494053596	1088.669945877519	2	545.3432006835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_NKLIM(Oxidation (M))AKKK_	ENSG00000172139|ENST00000305815|SLC9C1;nc|ENSG00000172139|Q4G0N8-2|SLC9C1;SLC9C1|p.T1117Hfs*4|1|0.38|ENSG00000172139|chr3:112167236-112167236|T/-|frameshift_variant	30.503639358989545	0.5181749237905803	2				NaN	NaN	0	NaN	6363	3345	9707
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9711	27.71	NaN	1046.1	30	0	187.48	0.034			+	16640	HHPGKHGY	8	41	466.72711181640625	NaN	0	466.72711181640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HHPGKHGY_	REV__ENSG00000103264|ENST00000311635|FBXO31;REV__nc|ENSG00000103264|Q5XUX0-2|FBXO31	29.841539824830324	1.7418937515398478	2				NaN	NaN	0	NaN	6364	3345	9707
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9729	27.746	NaN	23198	30	0	5469.2	0.214	+			37156	SIVKESILK	9	78	508.82059617074174	1015.6266394082835	2	508.8211364746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIVKESILK_	ENST00000436367.5_1_6:16658088-16761588:-|nuORF	140.11223852658463	0.010427410095706195	2				NaN	NaN	0	NaN	6379	3348	9728
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9730	27.75	NaN	3327.8	30	0	1146.4	0.106	+			40678	SVASPFTSK	9	43	462.24508637621625	922.4756198192325	2	462.2448425292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVASPFTSK_	ATP13A3|p.F1107Lfs*5|1|0.42|ENSG00000133657|chr3:194419960-194419960|A/-|frameshift_variant;ATP13A3|p.L1114Ffs*17|1|0.25|ENSG00000133657|chr3:194419939-194419940|-/A|frameshift_variant;ATP13A3|p.L1114Yfs*22|1|0.23|ENSG00000133657|chr3:194419940-194419940|A/-|frameshift_variant;ATP13A3|p.P1198Lfs*19|1|0.04|ENSG00000133657|chr3:194406007-194406008|-/ATATAGTA|frameshift_variant;ATP13A3|p.S1110Ffs*21|2|0.22|ENSG00000133657|chr3:194419952-194419953|-/A|frameshift_variant;ATP13A3|p.V1108Cfs*23|1|0.26|ENSG00000133657|chr3:194419959-194419960|-/A|frameshift_variant;ENSG00000127249|ENST00000342695|ATP13A4;ENSG00000133657|ENST00000645319|ATP13A3;ENSG00000187527|ENST00000342358|ATP13A5;nc|ENSG00000133657|Q9H7F0-2|ATP13A3;nc|ENSG00000133657|Q9H7F0|ATP13A3	58.22992032128504	0.22837015374068087	2				NaN	NaN	0	NaN	6380	3348	9728
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9731	27.752	NaN	4992.1	30	0	878.39	0.036	+			17224	HVITKTMEL	9	66	536.2963089173165	1070.578064901433	2	536.297607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HVITKTMEL_	ENSG00000153201|ENST00000283195|RANBP2;RANBP2|p.F3068Lfs*10|1|0.06|ENSG00000153201|chr2:108782692-108782692|T/-|frameshift_variant;RANBP2|p.H3114Sfs*18|1|0.33|ENSG00000153201|chr2:108782827-108782828|-/T|frameshift_variant	101.60071028292904	0.0375685401170269	2				NaN	NaN	0	NaN	6381	3348	9728
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9749	27.79	NaN	237.91	30	0	22.782	0.214				-1	AAVDAGMAM	9	26	426.682876924615	851.35120091603	2	426.6828918457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_AAVDAGM(Oxidation (M))AM_	ENSG00000011304|ENST00000356948|PTBP1;ENST00000586944.5_1_19:797434-805231:+|nuORF;nc|ENSG00000011304|P26599-1|PTBP1;nc|ENSG00000011304|P26599-2|PTBP1	31.954861631926434	0.5046124803899898	2				NaN	NaN	0	NaN	6396	3351	9748
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9750	27.793	NaN	2405.9	30	0	708.78	0.106	+			44813	TTSFLALSQ	9	39	484.25798789389097	966.501422854582	2	484.25811767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTSFLALSQ_	ENSG00000170234|ENST00000307063|PWWP2A	66.42927471994793	0.16001998865088202	2				NaN	NaN	0	NaN	6397	3351	9748
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9751	27.795	NaN	12496	30	0	4719.2	0.035				-1	 	0	65	329.5459100871291	985.6159008615873	3	329.5461730957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6398	3351	9748
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9769	27.832	NaN	1798.5	30	0	333.7	0.143	+			33419	RIIAVDINK	9	44	521.3238381256688	1040.6331233181375	2	521.3245849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RIIAVDINK_	ADH1B|p.A318Lfs*29|1|0.06|ENSG00000196616|chr4:99311533-99311533|C/-|frameshift_variant;ENSG00000187758|ENST00000209668|ADH1A;ENSG00000196616|ENST00000305046|ADH1B;ENSG00000248144|ENST00000515683|ADH1C;nc|ENSG00000196616|P00325-2|ADH1B	59.93077597824379	0.21419174904018318	2				NaN	NaN	0	NaN	6413	3354	9768
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9788	27.872	NaN	6197.4	30	0	930.83	0.214	+			34470	RVAETIFVK	9	61	531.818526296173	1061.622499659146	2	531.8194580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVAETIFVK_	ENSG00000107954|ENST00000369780|NEURL1;nc|ENSG00000107954|O76050-2|NEURL1	131.61620852596164	0.014413238321579053	2				NaN	NaN	0	NaN	6429	3357	9787
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9789	27.876	NaN	6105	30	0	2411	0.106	+			45178	TVMNGALVK	9	46	466.76480501554096	931.5150570978819	2	466.7652893066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVMNGALVK_	ENSG00000131389|ENST00000622186|SLC6A6;SLC6A6|p.R601H|1|0.36|ENSG00000131389|chr3:14484946-14484946|G/A|missense_variant	93.19546047674547	0.05585629608842056	2				NaN	NaN	0	NaN	6430	3357	9787
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9790	27.878	NaN	2983.5	30	0	2139.3	0.106				-1	 	0	26	343.1985221123092	684.3824912914184	2	343.19891357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6431	3357	9787
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9791	27.88	NaN	5251.9	30	0	2906.2	0.106	+			32343	QTVQLLIKK	9	41	357.5688761747464	1069.6847991244392	3	357.5692138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QTVQLLIKK_	ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1	42.86426827375447	0.38666266728046506	2				NaN	NaN	0	NaN	6432	3357	9787
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9792	27.881	NaN	1797	30	0	393.3	0.106			+	17176	HTPRTYKIAPK	11	47	437.92260130964115	1310.7459745291235	3	437.9224853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HTPRTYKIAPK_	REV__ENSG00000078018|ENST00000682079|MAP2;REV__nc|ENSG00000078018|P11137-3|MAP2	34.08650109265054	0.6322515996262609	2				NaN	NaN	0	NaN	6433	3357	9787
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9793	27.883	NaN	2774.4	30	0	805.99	0.106	+			48044	VSSAVILTK	9	53	459.28675659700605	916.5589602608121	2	459.28680419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VSSAVILTK_	ENSG00000120519|ENST00000335472|SLC10A7;nc|ENSG00000120519|Q0GE19-1|SLC10A7;nc|ENSG00000120519|Q0GE19-3|SLC10A7;nc|ENSG00000120519|Q0GE19-4|SLC10A7;nc|ENSG00000120519|Q0GE19-5|SLC10A7	143.37361013837676	0.008897369944672323	2				NaN	NaN	0	NaN	6434	3357	9787
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9794	27.885	NaN	1580.7	30	0	708.22	0.035	+			48746	VTVKFGHTQ	9	52	508.7793115036169	1015.5440700740338	2	508.7802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VTVKFGHTQ_	LYSMD1|p.V109Yfs*68|1|0.37|ENSG00000163155|chr1:151161957-151161957|T/-|frameshift_variant	47.657333605630114	0.33044192980041115	2				NaN	NaN	0	NaN	6435	3357	9787
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9812	27.922	NaN	4732.3	30	0	684.44	0.214	+			33532	RLADSLIGK	9	61	486.7949159268475	971.5752789204951	2	486.7954406738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RLADSLIGK_	ENSG00000186767|ENST00000374884|SPIN4	83.6470233535746	0.08277643980271215	2				NaN	NaN	0	NaN	6450	3360	9811
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9813	27.926	NaN	6148.3	30	0	1546.9	0.033			+	-1	SALAEAKL	8	52	422.74200092939856	843.4694489255971	2	422.7423400878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SALAEAKL_	REV__ARMC1|p.R188H|1|0.45|ENSG00000104442|chr8:65605441-65605441|C/T|missense_variant;REV__ENSG00000104442|ENST00000276569|ARMC1;REV__nc|ENSG00000104442|Q9NVT9-2|ARMC1	71.87747018426188	0.391254423828572	2				NaN	NaN	0	NaN	6451	3360	9811
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9831	27.963	NaN	1271.9	30	0	173.51	0.214			+	27902	MTSLKVSSV	9	46	476.2623757249235	NaN	0	476.26214599609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MTSLKVSSV_	REV__ENSG00000197471|ENST00000652691|SPN	36.446750945000026	0.29355505452396785	2				NaN	NaN	0	NaN	6466	3363	9830
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9832	27.967	NaN	1238.2	30	0	134.03	0.035	+			33783	RQAVPLFSK	9	44	523.310677635747	1044.6068023382938	2	523.3116455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RQAVPLFSK_	API5|p.T405Qfs*11|1|0.27|ENSG00000166181|chr11:43330046-43330046|A/-|frameshift_variant;ENSG00000166181|ENST00000531273|API5;nc|ENSG00000166181|Q9BZZ5-1|API5;nc|ENSG00000166181|Q9BZZ5-2|API5;nc|ENSG00000166181|Q9BZZ5-3|API5;nc|ENSG00000166181|Q9BZZ5-5|API5;nc|ENSG00000166181|Q9BZZ5-6|API5	60.11826168202944	0.21262886028301267	2				NaN	NaN	0	NaN	6467	3363	9830
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9884	28.08	NaN	2235.9	30	0	529.04	0.142	+			18950	IVQASVSLK	9	47	472.7924580995191	943.5703632658382	2	472.7922058105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IVQASVSLK_	ENSG00000103222|ENST00000399410|ABCC1;nc|ENSG00000103222|P33527-2|ABCC1;nc|ENSG00000103222|P33527-3|ABCC1;nc|ENSG00000103222|P33527-4|ABCC1;nc|ENSG00000103222|P33527-5|ABCC1;nc|ENSG00000103222|P33527-6|ABCC1;nc|ENSG00000103222|P33527-7|ABCC1;nc|ENSG00000103222|P33527-8|ABCC1;nc|ENSG00000103222|P33527-9|ABCC1	80.45461616416974	0.09558281504443908	2				NaN	NaN	0	NaN	6510	3372	9883
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9902	28.119	NaN	2800.9	30	0	811.77	0.214			+	3168	ASIPKAIQ	8	39	414.2527626909276	826.4909724486553	2	414.25299072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASIPKAIQ_	REV__ENSG00000127124|ENST00000372583|HIVEP3;REV__HIVEP3|p.G2228Vfs*5|1|0.27|ENSG00000127124|chr1:41510989-41510989|C/-|frameshift_variant;REV__nc|ENSG00000127124|Q5T1R4-2|HIVEP3	58.78195531508484	0.5138399468736706	2				NaN	NaN	0	NaN	6525	3375	9901
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9903	28.122	NaN	1958.7	30	0	242.78	0.106	+			10297	ETPKSPPPA	9	49	462.24508637621625	922.4756198192325	2	462.2490539550781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ETPKSPPPA_	ENST00000570631.5_1_16:67927225-67942650:+|nuORF	44.116797842482775	0.37197099687881774	2				NaN	NaN	0	NaN	6526	3375	9901
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9904	28.124	NaN	4138.3	30	0	1275.8	0.038				-1	ATQMVRMILK	10	35	402.89442390587715	1205.6614423178314	3	402.894775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_ATQMVRM(Oxidation (M))ILK_	ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5	33.921630207806714	0.6028135429846169	2				NaN	NaN	0	NaN	6527	3375	9901
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9922	28.162	NaN	2013.2	30	0	664.63	0.214	+			42611	TATGTVIV	8	33	381.2238704901895	NaN	0	381.2237548828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TATGTVIV_	ENSG00000083857|ENST00000441802|FAT1;FAT1|p.N3847Yfs*7|1|0.03|ENSG00000083857|chr4:186601370-186601371|-/TTATA|frameshift_variant;FAT1|p.P3228Lfs*42|1|0.27|ENSG00000083857|chr4:186611556-186611556|G/-|frameshift_variant;FAT1|p.P4313Lfs*36|1|0.34|ENSG00000083857|chr4:186596602-186596602|G/-|frameshift_variant	65.89745868150666	1.7418937515398478	2				NaN	NaN	0	NaN	6542	3378	9921
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9923	28.165	NaN	4333.3	30	0	1912.5	0.106				-1	 	0	35	329.5459100871291	985.6159008615873	3	329.54632568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6543	3378	9921
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9924	28.168	NaN	463.07	30	0	111.03	0.035			+	24852	LKDPQWKK	8	26	521.8062744140625	NaN	0	521.8062744140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LKDPQWKK_	REV__EHBP1|p.N344Ifs*2|1|0.38|ENSG00000115504|chr2:62864894-62864894|A/-|frameshift_variant;REV__EHBP1|p.N64Ifs*19|1|0.41|ENSG00000115504|chr2:62764289-62764289|A/-|frameshift_variant;REV__EHBP1|p.T756Qfs*17|1|0.44|ENSG00000115504|chr2:62949001-62949001|A/-|frameshift_variant;REV__ENSG00000115504|ENST00000431489|EHBP1;REV__ENSG00000173442|ENST00000309295|EHBP1L1;REV__ENST00000472809.5_1_2:62934317-62998533:+|nuORF;REV__ENST00000494958.1_1_2:62934317-63053404:+|nuORF;REV__nc|ENSG00000115504|Q8NDI1-2|EHBP1;REV__nc|ENSG00000115504|Q8NDI1|EHBP1	18.324413293986947	1.7418937515398478	2				NaN	NaN	0	NaN	6544	3378	9921
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9942	28.205	NaN	6066.6	30	0	2125.4	0.214			+	2011	AKLLLNWWD	9	49	386.88057869693046	NaN	0	386.8804931640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AKLLLNWWD_	REV__ENSG00000119041|ENST00000263956|GTF3C3	37.81151784470057	0.28666463014928195	2				NaN	NaN	0	NaN	6559	3381	9941
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9943	28.209	NaN	958.18	30	0	171.67	0.106	+			47444	VPTVSRPY	8	45	459.7561340332031	NaN	0	459.7561340332031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VPTVSRPY_	ENSG00000265808|ENST00000578049|SEC22B	42.396135135203025	1.7418937515398478	2				NaN	NaN	0	NaN	6560	3381	9941
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9944	28.211	NaN	697.37	30	0	66.751	0.036			+	18089	IKNKVSGLVQ	10	41	543.3387288184758	NaN	0	543.3386840820312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IKNKVSGLVQ_	REV__ENSG00000051009|ENST00000449352|FHIP1B;REV__ENST00000529360.1_1_11:6232738-6236214:-|nuORF;REV__nc|ENSG00000051009|Q8N612-2|FHIP1B	27.047317107675042	0.41136583337917604	2				NaN	NaN	0	NaN	6561	3381	9941
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9962	28.248	NaN	6857	30	0	2050.1	0.214	+			42476	TAMSSVLAK	9	62	454.2494090750223	906.4842652168446	2	454.2498779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAMSSVLAK_	ENSG00000107581|ENST00000369144|EIF3A;nc|ENSG00000107581|Q14152-2|EIF3A	101.25262130126117	0.03792372629710479	2				NaN	NaN	0	NaN	6576	3384	9961
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9963	28.252	NaN	1192.4	30	0	876.06	0.03				-1	 	0	12	343.1985221123092	684.3824912914184	2	343.1994934082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6577	3384	9961
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9981	28.289	NaN	1410.2	30	0	338.19	0.214	+			34896	SAAAVSMLK	9	46	439.2448142140308	NaN	0	439.2449645996094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAAAVSMLK_	ENSG00000041357|ENST00000044462|PSMA4;nc|ENSG00000041357|P25789-2|PSMA4	58.22992032128504	0.15686832049467786	2				NaN	NaN	0	NaN	6592	3387	9980
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9982	28.293	NaN	1081.3	30	0	162.75	0.036	+			15934	HAEVVRVVY	9	43	536.3020166120755	NaN	0	536.3015747070312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HAEVVRVVY_	ENSG00000175806|ENST00000317173|MSRA;ENST00000523637.2_1_8:9953486-10177544:+|nuORF;nc|ENSG00000175806|Q9UJ68-2|MSRA;nc|ENSG00000175806|Q9UJ68-3|MSRA;nc|ENSG00000175806|Q9UJ68-4|MSRA;nc|ENSG00000175806|Q9UJ68-5|MSRA	54.722347961057174	0.17414871455573902	2				NaN	NaN	0	NaN	6593	3387	9980
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10017	28.368	NaN	5542.4	30	0	890.16	0.142	+			28050	NAAQTSVAY	9	58	462.7247735193473	NaN	0	462.7239990234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAAQTSVAY_	ENSG00000113643|ENST00000231572|RARS1;nc|ENSG00000113643|P54136-2|RARS1	90.60085204095205	0.040385177724871185	2				NaN	NaN	0	NaN	6622	3393	10016
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10035	28.406	NaN	14695	30	0	3854.4	0.142	+			40545	SVAAPITVR	9	59	457.2767907333503	912.5390285335006	2	457.2772216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVAAPITVR_	ENSG00000170242|ENST00000527733|USP47;nc|ENSG00000170242|Q96K76-2|USP47;nc|ENSG00000170242|Q96K76|USP47;USP47|p.G1121Efs*22|2|0.29|ENSG00000170242|chr11:11948505-11948505|A/-|frameshift_variant	75.04331003522576	0.118981335847003	2				NaN	NaN	0	NaN	6637	3396	10034
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10053	28.446	NaN	14960	30	0	5168	0.145	+			4557	ATLEETLVKK	10	47	377.8920347832134	1130.65427494984	3	378.2261657714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATLEETLVKK_	ENSG00000254093|ENST00000314787|PINX1	54.722347961057174	0.4138398245444204	2				NaN	NaN	0	NaN	6652	3399	10052
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10071	28.484	NaN	11920	30	0	1055	0.214	+			43938	TPASAGHVW	9	74	463.22962759155683	924.4447022499137	2	463.22967529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TPASAGHVW_	ENSG00000125398|ENST00000245479|SOX9;SOX9|p.A379Gfs*5|1|0.71|ENSG00000125398|chr17:72123990-72123991|-/GG|frameshift_variant;SOX9|p.E388*|1|0.21|ENSG00000125398|chr17:72124012-72124054|GAGCAGCGAGCCGGGCCAGTCCCAGCGAACGCACATCAAGACG/-|frameshift_variant;SOX9|p.F423Sfs*47|1|0.36|ENSG00000125398|chr17:72124124-72124124|T/-|frameshift_variant;SOX9|p.G390Rfs*14|1|0.67|ENSG00000125398|chr17:72124021-72124022|-/CC|frameshift_variant;SOX9|p.H396Rfs*8|1|0.11|ENSG00000125398|chr17:72124040-72124041|-/CG|frameshift_variant;SOX9|p.H413Lfs*58|1|0.37|ENSG00000125398|chr17:72124094-72124095|-/TG|frameshift_variant;SOX9|p.I435Sfs*35|1|0.25|ENSG00000125398|chr17:72124157-72124157|C/-|frameshift_variant;SOX9|p.P374Rfs*9|1|0.38|ENSG00000125398|chr17:72123974-72123974|C/-|frameshift_variant;SOX9|p.Q416Nfs*54|1|0.48|ENSG00000125398|chr17:72124100-72124100|C/-|frameshift_variant;SOX9|p.S408Tfs*64|1|0.62|ENSG00000125398|chr17:72124072-72124073|-/CACTA|frameshift_variant;SOX9|p.S448*|1|0.34|ENSG00000125398|chr17:72124200-72124201|CC/-|frameshift_variant	157.98928361386217	0.005006955008209645	2				NaN	NaN	0	NaN	6667	3402	10070
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10072	28.488	NaN	3194.2	30	0	1217.8	0.032	+			35264	SALPLKQA	8	42	414.2527626909276	826.4909724486553	2	414.25311279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SALPLKQA_	ENSG00000140563|ENST00000357742|MCTP2;ENST00000456504.5_1_15:94858078-95022260:+|nuORF;MCTP2|p.L450Sfs*29|1|0.08|ENSG00000140563|chr15:94367650-94367651|-/AGTA|frameshift_variant;nc|ENSG00000140563|Q6DN12-2|MCTP2;nc|ENSG00000140563|Q6DN12-3|MCTP2;nc|ENSG00000140563|Q6DN12-4|MCTP2	50.0245360154114	0.5941082100236891	2				NaN	NaN	0	NaN	6668	3402	10070
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10090	28.525	NaN	3650.3	30	0	1099.7	0.141	+			35939	SEGKCFSV	8	50	428.6971351167215	855.379717300243	2	428.69732666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEGKCFSV_	ENSG00000079246|ENST00000392132|XRCC5;XRCC5|p.Q488Rfs*29|1|0.06|ENSG00000079246|chr2:216141305-216141305|C/-|frameshift_variant	87.69643885390035	0.28444366722805053	2				NaN	NaN	0	NaN	6683	3405	10089
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10125	28.601	NaN	10663	30	0	1652.9	0.214			+	30319	PTQLRYLK	8	65	340.2060715878706	1017.5963853638118	3	340.2064208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PTQLRYLK_	REV__ENSG00000125630|ENST00000263331|POLR1B;REV__nc|ENSG00000125630|Q9H9Y6-2|POLR1B;REV__nc|ENSG00000125630|Q9H9Y6-3|POLR1B;REV__nc|ENSG00000125630|Q9H9Y6-4|POLR1B;REV__nc|ENSG00000125630|Q9H9Y6-5|POLR1B	90.77665401227738	0.27511901818546464	2				NaN	NaN	0	NaN	6712	3411	10124
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10126	28.604	NaN	891.49	30	0	655.95	0.03				-1	 	0	12	343.1985221123092	684.3824912914184	2	343.1992492675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6713	3411	10124
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10144	28.641	NaN	865.27	30	0	194.29	0.214			+	44721	TTLLDKTK	8	39	460.2760925292969	NaN	0	460.2760925292969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTLLDKTK_	REV__ENSG00000169994|ENST00000409816|MYO7B;REV__ENST00000491278.5_1_2:128392149-128394989:+|nuORF;REV__ENST00000494959.1_1_2:128392149-128394989:+|nuORF;REV__ENST00000496841.5_1_2:128393248-128394989:+|nuORF;REV__nc|ENSG00000169994|Q6PIF6|MYO7B	42.396135135203025	1.7418937515398478	2				NaN	NaN	0	NaN	6728	3414	10143
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10145	28.644	NaN	2871.6	30	0	641.29	0.035	+			16028	HATTALLHY	9	54	513.7716216179797	1025.5286903027593	2	513.771728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HATTALLHY_	ENSG00000160563|ENST00000292035|MED27;ENST00000514280.1_1_5:79646842-79647379:-|nuORF;nc|ENSG00000160563|Q6P2C8-2|MED27	97.47269410471826	0.04379738608259218	2				NaN	NaN	0	NaN	6729	3414	10143
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10163	28.68	NaN	3313.3	30	0	498.76	0.214	+			36455	SEVKVVAV	8	50	415.75268387520936	829.4908148172187	2	415.7530517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEVKVVAV_	ARMCX5|p.N462Ifs*8|1|0.68|ENSG00000125962|chrX:102603522-102603522|A/-|frameshift_variant;ENSG00000125962|ENST00000473968|ARMCX5	60.97194046774394	0.49215940876911696	2				NaN	NaN	0	NaN	6744	3417	10162
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10164	28.684	NaN	9540.8	30	0	3002.1	0.106	+			32335	QTVAVGVIK	9	52	457.7867229405969	913.5588929479939	2	457.7871398925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QTVAVGVIK_	ENSG00000101210|ENST00000217182|EEF1A2;ENSG00000156508|ENST00000309268|EEF1A1;ENST00000417549.1_1_13:28789725-28790031:+|nuORF;ENST00000436459.2_1_9:135895553-135896258:+|nuORF;ENST00000513637.1_1_5:43495177-43495438:-|nuORF;ENST00000567658.1_1_16:27144806-27145163:-|nuORF;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	42.86426827375447	0.38666266728046506	2				NaN	NaN	0	NaN	6745	3417	10162
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10165	28.686	NaN	2179.7	30	0	649.95	0.106	+			18371	IQSTVMLDK	9	40	517.780625825333	1033.546698717466	2	517.7818603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IQSTVMLDK_	ENSG00000115415|ENST00000361099|STAT1;nc|ENSG00000115415|P42224-2|STAT1;STAT1|p.D534Mfs*14|1|0.24|ENSG00000115415|chr2:190980653-190980653|G/-|frameshift_variant;STAT1|p.K567Nfs*25|2|0.2|ENSG00000115415|chr2:190979798-190979798|T/-|frameshift_variant	58.2462437865262	0.22823408064396822	2				NaN	NaN	0	NaN	6746	3417	10162
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10166	28.688	NaN	2500.5	30	0	630.95	0.106	+			48006	VSQSPSPL	8	48	407.71863995751926	813.4227269818385	2	407.7190856933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSQSPSPL_	ENST00000471413.1_1_1:156212796-156212871:+|nuORF	90.36981228632155	0.27635063874291205	2				NaN	NaN	0	NaN	6747	3417	10162
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10167	28.689	NaN	2075.7	30	0	309.43	0.106	+			16384	HENIVIAKM	9	57	527.7891757971258	1053.5637986610516	2	527.7907104492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HENIVIAKM_	ENSG00000185624|ENST00000331483|P4HB	112.10723106719422	0.02684780151337622	2				NaN	NaN	0	NaN	6748	3417	10162
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10168	28.691	NaN	932.64	30	0	204.74	0.036	+			27541	MPDEATPHY	9	41	530.7250376489776	NaN	0	530.7257690429688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MPDEATPHY_	ENSG00000112893|ENST00000261483|MAN2A1;MAN2A1|p.D469*|1|0.33|ENSG00000112893|chr5:109781418-109781419|-/T|frameshift_variant;MAN2A1|p.F468Lfs*22|1|0.43|ENSG00000112893|chr5:109781419-109781419|T/-|frameshift_variant;MAN2A1|p.F842Lfs*16|1|0.14|ENSG00000112893|chr5:109823792-109823792|T/-|frameshift_variant;MAN2A1|p.W332Gfs*17|1|0.18|ENSG00000112893|chr5:109767687-109767687|T/-|frameshift_variant	53.351449002276354	0.18359631779194618	2				NaN	NaN	0	NaN	6749	3417	10162
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10186	28.729	NaN	486.03	30	0	52.633	0.144	+			11551	FPINIWIF	8	33	525.296142578125	NaN	0	525.296142578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FPINIWIF_	ENSG00000184650|ENST00000328248|ODF4	37.028477286268924	1.7418937515398478	2				NaN	NaN	0	NaN	6764	3420	10185
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10204	28.768	NaN	1067	30	0	189.03	0.142	+			15002	GTMVCAFLI	9	46	477.7427673339844	NaN	0	477.7427673339844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTMVCAFLI_	ENSG00000274391|ENST00000618007|TPTE;nc|ENSG00000274391|P56180-2|TPTE;nc|ENSG00000274391|P56180-3|TPTE;nc|ENSG00000274391|P56180-4|TPTE;TPTE|p.I462Yfs*2|1|0.16|ENSG00000274391|chr21:10602082-10602082|A/-|frameshift_variant	33.51558372728122	0.30835390848773375	2				NaN	NaN	0	NaN	6779	3423	10203
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10239	28.845	NaN	2499.9	30	0	797.72	0.142	+			19364	KALEAVFGK	9	51	481.78696423923077	961.5593755452616	2	481.7882080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KALEAVFGK_	ENSG00000147274|ENST00000320676|RBMX;ENST00000565907.1_1_X:135961433-135961586:-|nuORF;ENST00000567262.5_1_X:135958813-135961586:-|nuORF;nc|ENSG00000147274|P38159-2|RBMX;nc|ENSG00000147274|P38159-3|RBMX	83.6470233535746	0.08277643980271215	2				NaN	NaN	0	NaN	6808	3429	10238
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10257	28.884	NaN	16351	30	0	5626.2	0.214	+			43565	TIAPALVSK	9	62	450.28133532896067	898.5481177247214	2	450.2818298339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TIAPALVSK_	ENO1|p.D318Mfs*5|1|0.43|ENSG00000074800|chr1:8864006-8864006|C/-|frameshift_variant;ENSG00000074800|ENST00000234590|ENO1;ENST00000464920.1_1_1:8921421-8930582:-|nuORF	75.04331003522576	0.118981335847003	2				NaN	NaN	0	NaN	6823	3432	10256
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10258	28.888	NaN	3099.4	30	0	309.14	0.106	+			7779	DPEGSRITY	9	63	519.248154609108	1036.481756285016	2	519.2498168945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DPEGSRITY_	ENSG00000124596|ENST00000424266|OARD1;ENST00000465893.1_1_6:41037763-41039373:-|nuORF	117.81106730687013	0.02252488733980868	2				NaN	NaN	0	NaN	6824	3432	10256
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10259	28.89	NaN	1436.5	30	0	815.13	0.106				-1	IVPCMNKH	8	38	507.74919315079967	NaN	0	507.74896240234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_IVPC(Carbamidomethyl (C))M(Oxidation (M))NKH_	ENSG00000135766|ENST00000366641|EGLN1;nc|ENSG00000135766|Q9GZT9-2|EGLN1;nc|ENSG00000135766|Q9GZT9-3|EGLN1	29.841539824830324	1.7418937515398478	2				NaN	NaN	0	NaN	6825	3432	10256
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10260	28.891	NaN	2527.5	30	0	441.24	0.033	+			26503	LTMPGGVAK	9	41	437.2466036482996	NaN	0	437.24676513671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LTMPGGVAK_	ENSG00000087266|ENST00000503393|SH3BP2;ENST00000511185.5_1_4:2814082-2826487:+|nuORF;ENST00000511237.5_1_4:2795936-2826487:+|nuORF;ENST00000511663.5_1_4:2811506-2826487:+|nuORF;nc|ENSG00000087266|P78314-2|SH3BP2;nc|ENSG00000087266|P78314-3|SH3BP2;nc|ENSG00000087266|P78314-4|SH3BP2;SH3BP2|p.P238Rfs*40|1|0.37|ENSG00000087266|chr4:2829615-2829615|C/-|frameshift_variant;SH3BP2|p.P368Qfs*21|1|0.28|ENSG00000087266|chr4:2830004-2830004|C/-|frameshift_variant;SH3BP2|p.R342Pfs*7|1|0.24|ENSG00000087266|chr4:2829924-2829925|-/C|frameshift_variant;SH3BP2|p.V381Rfs*14|1|0.18|ENSG00000087266|chr4:2830040-2830041|-/C|frameshift_variant;SH3BP2|p.V381Wfs*8|1|0.47|ENSG00000087266|chr4:2830041-2830041|C/-|frameshift_variant	71.29570347882199	0.10120983364817086	2				NaN	NaN	0	NaN	6826	3432	10256
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10278	28.928	NaN	1469.8	30	0	362.15	0.147				-1	EAAWQFFMSD	10	37	416.50592041015625	NaN	0	416.50592041015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_EAAWQFFM(Oxidation (M))SD_	ENSG00000130561|ENST00000409110|SAG	20.030474535948922	0.4201028297492154	2				NaN	NaN	0	NaN	6841	3435	10277
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10296	28.967	NaN	1524.8	30	0	970.84	0.141	+			29621	PGAGRTTSL	9	40	430.2367929383913	NaN	0	430.2369384765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PGAGRTTSL_	ENST00000581471.2_1_18:5238177-5238297:+|nuORF	29.14955571784316	0.3303970763161698	2				NaN	NaN	0	NaN	6856	3438	10295
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10331	29.045	NaN	21219	30	0	2398.7	0.141	+			26383	LTDQVSVI	8	70	437.7475872969158	873.4806216606316	2	437.7474365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LTDQVSVI_	ENSG00000099995|ENST00000215793|SF3A1;nc|ENSG00000099995|Q15459-2|SF3A1	101.60071028292904	0.24979566554663588	2				NaN	NaN	0	NaN	6885	3444	10330
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10349	29.084	NaN	4933	30	0	2721.6	0.214	+			30794	QEALAHAL	8	40	426.7322998046875	NaN	0	426.7322998046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QEALAHAL_	ENSG00000137497|ENST00000393695|NUMA1;nc|ENSG00000137497|Q14980-2|NUMA1;nc|ENSG00000137497|Q14980-3|NUMA1;nc|ENSG00000137497|Q14980-4|NUMA1;NUMA1|p.K1766Rfs*2|1|0.39|ENSG00000137497|chr11:72007357-72007357|G/-|frameshift_variant;NUMA1|p.L1786Pfs*18|1|0.23|ENSG00000137497|chr11:72007295-72007296|-/G|frameshift_variant	71.37791200682192	1.7418937515398478	2				NaN	NaN	0	NaN	6900	3447	10348
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10350	29.087	NaN	1901	30	0	1129.5	0.106	+			17158	HTFGGPLLK	9	41	485.2793081498301	968.5440633664603	2	485.27923583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HTFGGPLLK_	ENSG00000161642|ENST00000394313|ZNF385A;ENST00000552382.5_1_12:54764042-54772879:-|nuORF;nc|ENSG00000161642|Q96PM9-2|ZNF385A;nc|ENSG00000161642|Q96PM9-3|ZNF385A;nc|ENSG00000161642|Q96PM9|ZNF385A	68.78682469695295	0.14603441672067394	2				NaN	NaN	0	NaN	6901	3447	10348
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10351	29.089	NaN	2130.4	30	0	592.97	0.106	+			48617	VTSEVPFSK	9	39	497.2661340295857	NaN	0	497.2657470703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTSEVPFSK_	ENSG00000116251|ENST00000234875|RPL22;ENST00000453217.1_1_17:15987383-15987569:+|nuORF;RPL22|p.K89Nfs*3|1|0.38|ENSG00000116251|chr1:6186792-6186792|T/-|frameshift_variant	63.53385203322761	0.134247007536971	2				NaN	NaN	0	NaN	6902	3447	10348
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10352	29.091	NaN	1078.6	30	0	327.06	0.034			+	45423	TVWNTVLD	8	35	474.24651136074857	NaN	0	474.2466125488281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TVWNTVLD_	REV__ENSG00000162994|ENST00000401408|CLHC1;REV__nc|ENSG00000162994|Q8NHS4-2|CLHC1	40.77816245573522	1.7418937515398478	2				NaN	NaN	0	NaN	6903	3447	10348
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10370	29.128	NaN	2606.6	30	0	423.4	0.142	+			16082	HDAEIVRL	8	57	476.76404084182496	951.51352875045	2	476.76458740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HDAEIVRL_	ENSG00000198901|ENST00000394249|PRC1;nc|ENSG00000198901|O43663-2|PRC1;nc|ENSG00000198901|O43663-3|PRC1;nc|ENSG00000198901|O43663-4|PRC1	71.87747018426188	0.391254423828572	2				NaN	NaN	0	NaN	6918	3450	10369
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10388	29.168	NaN	2130.3	30	0	387.49	0.142	+			10975	FEDAKEAL	8	52	461.73088668001316	921.4472204268263	2	461.72906494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FEDAKEAL_	ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232319904-232323320:-|nuORF	60.11826168202944	0.5006107059937851	2				NaN	NaN	0	NaN	6933	3453	10387
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10406	29.206	NaN	11489	30	0	1907.7	0.141	+			41537	SVQAVLVGK	9	58	450.779507583999	899.5444622347981	2	450.77960205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVQAVLVGK_	ENSG00000005810|ENST00000544440|MYCBP2;MYCBP2|p.C1064Ifs*31|1|0.09|ENSG00000005810|chr13:77211267-77211279|TTATCAGAAGGCA/-|frameshift_variant;MYCBP2|p.G651Efs*24|1|0.04|ENSG00000005810|chr13:77257781-77257782|-/ATTAGTTTTT|frameshift_variant;MYCBP2|p.K375Sfs*4|1|0.3|ENSG00000005810|chr13:77270014-77270014|T/-|frameshift_variant;MYCBP2|p.N1867Tfs*9|1|0.15|ENSG00000005810|chr13:77171572-77171572|T/-|frameshift_variant;MYCBP2|p.N3049*|1|0.11|ENSG00000005810|chr13:77097894-77097895|TT/-|frameshift_variant;MYCBP2|p.P4047Qfs*26|2|0.35|ENSG00000005810|chr13:77067782-77067782|G/-|frameshift_variant;MYCBP2|p.T1507Ffs*24|1|0.04|ENSG00000005810|chr13:77185189-77185190|-/TTGTAAA|frameshift_variant;MYCBP2|p.T4311Pfs*37|1|0.14|ENSG00000005810|chr13:77059619-77059619|G/-|frameshift_variant;MYCBP2|p.V3749*|1|0.12|ENSG00000005810|chr13:77081486-77081486|C/-|frameshift_variant;nc|ENSG00000005810|O75592-2|MYCBP2	104.01359247289065	0.03510646158778409	2				NaN	NaN	0	NaN	6948	3456	10405
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10441	29.283	NaN	1767.4	30	0	261.71	0.214	+			36623	SGGEQPIPL	9	49	449.2375547246289	896.4605565160579	2	449.2377624511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SGGEQPIPL_	ENSG00000138688|ENST00000679879|BLTP1;nc|ENSG00000138688|Q2LD37-4|BLTP1;nc|ENSG00000138688|Q2LD37-6|BLTP1;nc|ENSG00000138688|Q2LD37-7|BLTP1;nc|ENSG00000138688|Q2LD37|BLTP1	51.33545320467046	0.2872990594074956	2				NaN	NaN	0	NaN	6977	3462	10440
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10442	29.286	NaN	2355.2	30	0	436.47	0.035			+	19941	KEFLTRAK	8	56	496.7981201825697	991.5816874319394	2	496.79803466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEFLTRAK_	REV__ENSG00000006530|ENST00000649286|AGK;REV__ENST00000465241.5_1_7:141255266-141315366:+|nuORF	44.116797842482775	0.6307669463330267	2				NaN	NaN	0	NaN	6978	3462	10440
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10460	29.323	NaN	891.98	30	0	180.95	0.142	+			47318	VPAAASKISM	10	46	487.7709369340728	973.5273209349456	2	487.7711486816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VPAAASKISM_	ENSG00000130640|ENST00000252936|TUBGCP2;nc|ENSG00000130640|Q9BSJ2-4|TUBGCP2;TUBGCP2|p.H261Qfs*13|1|0.5|ENSG00000130640|chr10:133293603-133293603|G/-|frameshift_variant	51.52775601994872	0.4429225830406686	2				NaN	NaN	0	NaN	6993	3465	10459
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10478	29.361	NaN	2506.2	30	0	209.39	0.214	+			16308	HEIDGKALL	9	58	498.2797541178706	994.5449553025412	2	498.2802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HEIDGKALL_	ENSG00000010803|ENST00000695335|SCMH1;ENSG00000047634|ENST00000380041|SCML1;nc|ENSG00000010803|Q96GD3-2|SCMH1;nc|ENSG00000010803|Q96GD3-3|SCMH1;nc|ENSG00000010803|Q96GD3-4|SCMH1;nc|ENSG00000010803|Q96GD3-5|SCMH1;nc|ENSG00000010803|Q96GD3-6|SCMH1;nc|ENSG00000010803|Q96GD3|SCMH1;nc|ENSG00000047634|Q9UN30-1|SCML1;nc|ENSG00000047634|Q9UN30-2|SCML1	118.74307786436346	0.02196067127630568	2				NaN	NaN	0	NaN	7008	3468	10477
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10479	29.365	NaN	384.48	30	0	35.1	0.106	+			439	AAVESFVTK	9	33	476.2608337402344	NaN	0	476.2608337402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAVESFVTK_	ENSG00000132740|ENST00000255078|IGHMBP2	19.996771675451527	0.3693019437812985	2				NaN	NaN	0	NaN	7009	3468	10477
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10480	29.367	NaN	1359.3	30	0	211.22	0.033	+			2890	ASASTFVLV	9	35	447.75037406817825	NaN	0	447.7505798339844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASASTFVLV_	ENST00000425191.6_1_16:8814630-8814729:+|nuORF	38.80614096846853	0.28164298475537564	2				NaN	NaN	0	NaN	7010	3468	10477
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10498	29.404	NaN	2660.3	30	0	1373.9	0.214	+			31022	QETIRTAL	8	44	466.26367541670646	930.512797900213	2	466.2638854980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QETIRTAL_	ENSG00000105379|ENST00000309244|ETFB;nc|ENSG00000105379|P38117-2|ETFB	58.78195531508484	0.5138399468736706	2				NaN	NaN	0	NaN	7025	3471	10497
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10499	29.407	NaN	923.51	30	0	143.59	0.034	+			27943	MVGKTFTY	8	43	481.7367858886719	NaN	0	481.7367858886719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_M(Oxidation (M))VGKTFTY_	CYP51A1|p.L333Wfs*13|1|0.15|ENSG00000001630|chr7:92123208-92123208|A/-|frameshift_variant;ENSG00000001630|ENST00000003100|CYP51A1;ENST00000419457.1_1_13:29297642-29297861:-|nuORF;nc|ENSG00000001630|Q16850-2|CYP51A1	63.30626980617807	1.7418937515398478	2				NaN	NaN	0	NaN	7026	3471	10497
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10534	29.483	NaN	91675	30	0	32443	0.214				-1	 	0	81	453.2682809815003	904.5220090298006	2	453.2684631347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7055	3477	10533
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10535	29.486	NaN	6268	30	0	1675.9	0.035				-1	 	0	45	494.7580603971822	987.5015678611644	2	494.7588195800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7056	3477	10533
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10553	29.522	NaN	3270.6	30	0	878.76	0.214			+	29359	PAASTIISK	9	57	444.26321850341685	886.5118840736337	2	444.26300048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PAASTIISK_	REV__ANK3|p.I2751Nfs*14|2|0.36|ENSG00000151150|chr10:60072629-60072630|-/T|frameshift_variant;REV__ANK3|p.I2751Yfs*21|1|0.07|ENSG00000151150|chr10:60072630-60072630|T/-|frameshift_variant;REV__ANK3|p.I3117Sfs*2|3|0.22|ENSG00000151150|chr10:60071532-60071532|T/-|frameshift_variant;REV__ANK3|p.K2612Rfs*25|1|0.43|ENSG00000151150|chr10:60073046-60073046|T/-|frameshift_variant;REV__ANK3|p.K2850Rfs*29|1|0.08|ENSG00000151150|chr10:60072332-60072332|T/-|frameshift_variant;REV__ANK3|p.K3331Nfs*6|1|0.32|ENSG00000151150|chr10:60070888-60070888|T/-|frameshift_variant;REV__ANK3|p.K3778Nfs*26|1|0.37|ENSG00000151150|chr10:60069547-60069547|T/-|frameshift_variant;REV__ANK3|p.K4020Rfs*45|4|0.35|ENSG00000151150|chr10:60068822-60068822|T/-|frameshift_variant;REV__ANK3|p.K4140Nfs*15|2|0.27|ENSG00000151150|chr10:60064188-60064188|T/-|frameshift_variant;REV__ANK3|p.L1778Tfs*66|1|0.38|ENSG00000151150|chr10:60075550-60075551|-/G|frameshift_variant;REV__ANK3|p.M3608Cfs*4|1|0.37|ENSG00000151150|chr10:60070059-60070059|T/-|frameshift_variant;REV__ANK3|p.P2846Tfs*8|1|0.32|ENSG00000151150|chr10:60072346-60072347|-/C|frameshift_variant;REV__ANK3|p.S4352Vfs*2|1|0.51|ENSG00000151150|chr10:60055669-60055670|-/C|frameshift_variant;REV__ANK3|p.W4141Mfs*12|1|0.36|ENSG00000151150|chr10:60064187-60064188|-/T|frameshift_variant;REV__ENSG00000151150|ENST00000280772|ANK3	68.78682469695295	0.14603441672067394	2				NaN	NaN	0	NaN	7071	3480	10552
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10554	29.526	NaN	703.35	30	0	209.21	0.106	+			46919	VIVETASLK	9	36	480.29217256085445	NaN	0	480.2920837402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VIVETASLK_	ENST00000013070.10_1_14:93676257-93678393:+|nuORF	54.776311868738084	0.17377682019723872	2				NaN	NaN	0	NaN	7072	3480	10552
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10555	29.528	NaN	1084.3	30	0	538.33	0.106				-1	ISWMKDKKSL	10	27	417.8968002632807	NaN	0	417.5626525878906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_ISWM(Oxidation (M))KDKKSL_	ENSG00000072195|ENST00000312358|SPEG;nc|ENSG00000072195|Q15772-1|SPEG;SPEG|p.R3177Pfs*3|1|0.2|ENSG00000072195|chr2:219492170-219492171|-/G|frameshift_variant	21.68575002086885	0.4201028297492154	2				NaN	NaN	0	NaN	7073	3480	10552
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10556	29.529	NaN	986.54	30	0	216.13	0.106	+			24538	LGLLAPLASA	10	33	463.2890811706091	NaN	0	463.28875732421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LGLLAPLASA_	ENST00000515156.2_1_5:68927792-68932223:+|nuORF;ENST00000515156.2_1_5:68927792-68932223:+|nuORF;ENST00000545024.1_5:69806308-69808341:+|nuORF	38.80614096846853	0.372755673314885	2				NaN	NaN	0	NaN	7074	3480	10552
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10557	29.531	NaN	324.74	30	0	239.25	0.03			+	45715	VAAPASIG	8	7	343.19884155861894	NaN	0	343.1987609863281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VAAPASIG_	REV__ENST00000330753.5_1_14:85996623-86087491:+|nuORF;REV__ENST00000554746.1_1_14:85996623-86087517:+|nuORF	5.08689130490037	1.7418937515398478	2				NaN	NaN	0	NaN	7075	3480	10552
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10575	29.568	NaN	2452.4	30	0	683.27	0.214	+			12387	GDYKINLK	8	45	475.7683613460023	949.5221697588046	2	475.7686767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GDYKINLK_	ENSG00000039068|ENST00000261769|CDH1;ENST00000562118.1_1_16:68857288-68867399:+|nuORF;ENST00000562836.5_1_16:68797408-68867399:+|nuORF;nc|ENSG00000039068|P12830-2|CDH1	73.97473282117947	0.3737790450121076	2				NaN	NaN	0	NaN	7090	3483	10574
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10576	29.571	NaN	1300.6	30	0	294	0.106			+	39164	SSVVALYNL	9	41	483.2682460883106	964.5219392434212	2	483.2682189941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSVVALYNL_	REV__ENST00000469188.1_1_5:56183212-56183548:+|nuORF	42.86426827375447	0.38666266728046506	2				NaN	NaN	0	NaN	7091	3483	10574
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10577	29.573	NaN	900.77	30	0	174.47	0.035	+			11936	FVHPKPVSL	9	36	512.3024079103171	1022.5902628874343	2	512.30419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FVHPKPVSL_	ENSG00000175727|ENST00000319080|MLXIP;ENST00000541750.1_12:122618368-122620257:+|nuORF;MLXIP|p.V645Rfs*84|1|0.4|ENSG00000175727|chr12:122135561-122135562|-/C|frameshift_variant;nc|ENSG00000175727|Q9HAP2-2|MLXIP;nc|ENSG00000175727|Q9HAP2-3|MLXIP;nc|ENSG00000175727|Q9HAP2-4|MLXIP;nc|ENSG00000175727|Q9HAP2-5|MLXIP	44.116797842482775	0.37197099687881774	2				NaN	NaN	0	NaN	7092	3483	10574
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10595	29.611	NaN	4036.7	30	0	1281.2	0.214	+			37086	SISISVAR	8	38	416.7478248480262	831.4810967628524	2	416.747802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SISISVAR_	CON__P04264;ENSG00000167768|ENST00000252244|KRT1	93.19546047674547	0.2677966331495483	2				NaN	NaN	0	NaN	7107	3486	10594
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10596	29.614	NaN	6376.5	30	0	2391.3	0.106	+			47437	VPTDEARAF	9	57	503.25334587754867	1004.4921388218974	2	503.25341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VPTDEARAF_	ENSG00000103769|ENST00000261890|RAB11A;ENSG00000185236|ENST00000328024|RAB11B;nc|ENSG00000103769|P62491-2|RAB11A;nc|ENSG00000185236|Q15907-2|RAB11B	63.53385203322761	0.18415635464017938	2				NaN	NaN	0	NaN	7108	3486	10594
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10597	29.616	NaN	1718.7	30	0	214.96	0.035	+			26314	LSVSGAVIRI	10	44	507.81873215097113	1013.6229113687423	2	507.81884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSVSGAVIRI_	ENST00000505769.5_2_6:71123313-71138035:+|nuORF	53.08895987439943	0.42869529153390606	2				NaN	NaN	0	NaN	7109	3486	10594
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10632	29.692	NaN	1961.8	30	0	280.2	0.214	+			2915	ASCEVLTVK	9	59	475.2544745711315	NaN	0	475.25439453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASCEVLTVK_	ENSG00000111110|ENST00000228705|PPM1H;PPM1H|p.T227Hfs*30|2|0.16|ENSG00000111110|chr12:62801894-62801894|G/-|frameshift_variant	59.93077597824379	0.14961415694175798	2				NaN	NaN	0	NaN	7138	3492	10631
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10633	29.696	NaN	1110.3	30	0	290.29	0.032	+			11543	FPGTAGPGL	9	38	408.7162042522721	NaN	0	408.716064453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FPGTAGPGL_	nc|ENSG00000184385|Q8N2C9|UMODL1-AS1	38.80614096846853	0.28164298475537564	2				NaN	NaN	0	NaN	7139	3492	10631
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10668	29.772	NaN	6681.7	30	0	1872.4	0.142	+			28439	NEVPVKEL	8	51	464.2604757046918	926.5063984761837	2	464.26019287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NEVPVKEL_	ENSG00000108829|ENST00000225972|LRRC59	101.25262130126117	0.2499877059228457	2				NaN	NaN	0	NaN	7168	3498	10667
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10703	29.849	NaN	4046.5	30	0	1002.1	0.214				-1	 	0	45	494.7580603971822	987.5015678611644	2	494.75897216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7197	3504	10702
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10704	29.853	NaN	1406.7	30	0	424.86	0.106				-1	 	0	26	453.2682809815003	904.5220090298006	2	453.2685241699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7198	3504	10702
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10705	29.855	NaN	377.43	30	0	56.745	0.106			+	-1	IHMQAMVA	8	26	466.7219543457031	NaN	0	466.7219543457031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Oxidation (M)	_IHM(Oxidation (M))QAM(Oxidation (M))VA_	REV__ENST00000397998.7_1_8:19315195-19315306:-|nuORF	20.481830146152948	1.741893751539848	2				NaN	NaN	0	NaN	7199	3504	10702
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10706	29.856	NaN	3744.9	30	0	2060	0.039			+	-1	EAMVEKKGKKG	11	39	407.55975421203715	NaN	0	407.5594482421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_EAM(Oxidation (M))VEKKGKKG_	REV__ENSG00000087263|ENST00000566157|OGFOD1;REV__ENST00000563733.5_1_16:56485524-56492507:+|nuORF;REV__ENST00000568172.1_1_16:56485524-56500079:+|nuORF;REV__ENST00000569645.1_1_16:56485524-56487341:+|nuORF	35.17822180527639	0.40864158092774266	2				NaN	NaN	0	NaN	7200	3504	10702
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10741	29.932	NaN	824.81	30	0	264.5	0.142			+	36926	SIKLYDNI	8	34	483.268798828125	NaN	0	483.268798828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIKLYDNI_	REV__ENST00000395514.5_1_14:55309440-55309725:-|nuORF	32.81241826257853	1.7418937515398478	2				NaN	NaN	0	NaN	7229	3510	10740
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10759	29.971	NaN	3582.4	30	0	1419.9	0.147	+			31180	QGMDSGKKGRR	11	37	407.2145660288609	NaN	0	407.2146301269531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QGMDSGKKGRR_	ENST00000445000.2_1_6:2988967-2989081:+|nuORF	34.08650109265054	0.41350691770670583	2				NaN	NaN	0	NaN	7244	3513	10758
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10777	30.01	NaN	6398.1	30	0	1721.7	0.145				-1	ASPCSWERL	9	42	369.17455105863814	1104.5018237761144	3	369.1746826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_ASPC(Carbamidomethyl (C))SWERL_	nc|ENSG00000174407|Q9H1L0|MIR1-1HG	42.396135135203025	0.392153681582562	2				NaN	NaN	0	NaN	7259	3516	10776
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10795	30.049	NaN	2390.5	30	0	923.98	0.138				-1	 	0	22	343.1987158967589	684.3828788603179	2	343.1990051269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7274	3519	10794
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10813	30.086	NaN	2653.1	30	0	475.93	0.141	+			24264	LEVKGTQL	8	50	444.26370363963036	886.5128543460607	2	444.2635498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LEVKGTQL_	ENSG00000143036|ENST00000271227|SLC44A3;nc|ENSG00000143036|Q8N4M1-2|SLC44A3;nc|ENSG00000143036|Q8N4M1-3|SLC44A3;SLC44A3|p.V304Cfs*11|1|0.06|ENSG00000143036|chr1:94845296-94845297|-/T|frameshift_variant	65.46538089061403	0.44767499471257033	2				NaN	NaN	0	NaN	7289	3522	10812
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10831	30.125	NaN	2077.6	30	0	1064.3	0.214	+			33573	RLIPNPTHG	9	31	502.7848503177072	1003.5551477022144	2	502.78546142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RLIPNPTHG_	ENST00000544944.6_1_19:45542792-45543053:+|nuORF	29.14955571784316	0.5308295550522326	2				NaN	NaN	0	NaN	7304	3525	10830
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10832	30.129	NaN	22631	30	0	8756	0.039			+	12357	GDPLIAIRKNE	11	50	409.23444670644324	1224.6815107195298	3	409.2351989746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GDPLIAIRKNE_	REV__ENSG00000149972|ENST00000524871|CNTN5;REV__ENST00000528727.5_1_11:99426939-100095567:+|nuORF;REV__nc|ENSG00000149972|O94779-2|CNTN5;REV__nc|ENSG00000149972|O94779-4|CNTN5	28.5767321226876	0.690044582712672	2				NaN	NaN	0	NaN	7305	3525	10830
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10850	30.166	NaN	3387.8	30	0	427.92	0.144	+			21875	KRMRTSFK	8	56	527.3050452806333	1052.5955376280665	2	527.3062744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KRMRTSFK_	ENSG00000106689|ENST00000373615|LHX2;ENSG00000143355|ENST00000367387|LHX9;LHX9|p.P345Rfs*18|1|0.21|ENSG00000143355|chr1:197929096-197929096|C/-|frameshift_variant;nc|ENSG00000143355|Q9NQ69-2|LHX9;nc|ENSG00000143355|Q9NQ69-3|LHX9;nc|ENSG00000143355|Q9NQ69-4|LHX9	58.78195531508484	0.5138399468736706	2				NaN	NaN	0	NaN	7320	3528	10849
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10868	30.205	NaN	852.91	30	0	179.77	0.142			+	48493	VTMTGAAAII	10	36	474.2645568847656	NaN	0	474.2645568847656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTMTGAAAII_	REV__ENSG00000145198|ENST00000691901|VWA5B2;REV__ENST00000497229.1_1_3:183950976-183951198:+|nuORF;REV__VWA5B2|p.P213Hfs*10|1|0.39|ENSG00000145198|chr3:184233680-184233680|C/-|frameshift_variant;REV__VWA5B2|p.P244Lfs*37|1|0.32|ENSG00000145198|chr3:184234302-184234302|C/-|frameshift_variant;REV__VWA5B2|p.V1061Gfs*60|1|0.12|ENSG00000145198|chr3:184241398-184241399|-/C|frameshift_variant	37.15910966729921	0.3781637092648983	2				NaN	NaN	0	NaN	7335	3531	10867
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10886	30.244	NaN	13367	30	0	3352	0.142	+			17606	IEGKVVSSL	9	68	466.2766497490094	930.5387465648188	2	466.2768249511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IEGKVVSSL_	ENSG00000132688|ENST00000368223|NES;NES|p.A1050Pfs*14|1|0.36|ENSG00000132688|chr1:156671040-156671040|C/-|frameshift_variant;NES|p.P1439Qfs*11|1|0.19|ENSG00000132688|chr1:156669874-156669874|C/-|frameshift_variant;NES|p.V1249Cfs*11|1|0.37|ENSG00000132688|chr1:156670443-156670443|C/-|frameshift_variant	141.52041321563706	0.009766778904176347	2				NaN	NaN	0	NaN	7350	3534	10885
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10921	30.321	NaN	33839	30	0	4479.3	0.214				-1	ELQCADLWKRF	11	74	489.2472208757947	1464.719833227584	3	489.24725341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_ELQC(Carbamidomethyl (C))ADLWKRF_	ENSG00000092607|ENST00000369429|TBX15;nc|ENSG00000092607|Q96SF7-2|TBX15;TBX15|p.N507Cfs*20|1|0.07|ENSG00000092607|chr1:118885021-118885022|TT/-|frameshift_variant;TBX15|p.P194Qfs*10|1|0.06|ENSG00000092607|chr1:118924758-118924758|G/-|frameshift_variant;TBX15|p.T524Hfs*4|1|0.48|ENSG00000092607|chr1:118884971-118884972|-/G|frameshift_variant	37.50817390946774	0.5920388381045607	2				NaN	NaN	0	NaN	7379	3540	10920
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10922	30.325	NaN	896.78	30	0	239.39	0.106			+	18655	ISVASDSTF	9	34	463.72677610932635	925.4389992854527	2	463.7264099121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ISVASDSTF_	REV__CDH23|p.F3223Lfs*43|1|0.34|ENSG00000107736|chr10:71812773-71812773|T/-|frameshift_variant;REV__ENSG00000107736|ENST00000224721|CDH23;REV__ENST00000398792.3_1_10:73483820-73501738:+|nuORF;REV__nc|ENSG00000107736|Q9H251-2|CDH23;REV__nc|ENSG00000107736|Q9H251-3|CDH23;REV__nc|ENSG00000107736|Q9H251-4|CDH23;REV__nc|ENSG00000107736|Q9H251-8|CDH23	63.30626980617807	0.18605348971131092	2				NaN	NaN	0	NaN	7380	3540	10920
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10923	30.327	NaN	1344.8	30	0	375.58	0.034	+			18185	ILYLVTPP	8	32	458.28063898068007	914.5467250281602	2	458.2787170410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ILYLVTPP_	ENSG00000171885|ENST00000383168|AQP4;nc|ENSG00000171885|P55087-2|AQP4	46.76643321282427	0.6143254112625767	2				NaN	NaN	0	NaN	7381	3540	10920
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10941	30.364	NaN	2101.9	30	0	158.62	0.215	+			16180	HEAMKLVTM	9	62	530.2701119965218	1058.5256710598435	2	530.271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HEAMKLVTM_	ENSG00000177963|ENST00000526104|RIC8A;ENST00000526557.1_1_11:213233-214347:+|nuORF;ENST00000530149.1_1_11:213233-213428:+|nuORF;nc|ENSG00000177963|Q9NPQ8-2|RIC8A;nc|ENSG00000177963|Q9NPQ8-3|RIC8A;nc|ENSG00000177963|Q9NPQ8-4|RIC8A	88.17693792209575	0.07000514020414955	2				NaN	NaN	0	NaN	7396	3543	10940
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10942	30.368	NaN	2505.7	30	0	820.21	0.04			+	45143	TVLLHYVAQEE	11	38	434.5618591308594	NaN	0	434.5618591308594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVLLHYVAQEE_	REV__FAT1|p.R3098T|1|0.26|ENSG00000083857|chr4:186613279-186613279|C/G|missense_variant	29.550750289552195	0.43372083775723597	2				NaN	NaN	0	NaN	7397	3543	10940
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10977	30.442	NaN	1811.6	30	0	566.54	0.214	+			39388	STDMPAAFK	9	42	484.2312373846378	966.4479218360756	2	484.2314147949219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STDMPAAFK_	ENSG00000185946|ENST00000423855|RNPC3;ENST00000533834.1_1_1:104080032-104087738:+|nuORF;ENST00000605810.1_1_3:70174691-70175321:-|nuORF;nc|ENSG00000185946|Q96LT9-2|RNPC3	84.9155231211612	0.07920012719736333	2				NaN	NaN	0	NaN	7426	3549	10976
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10978	30.446	NaN	2037.7	30	0	399.15	0.106				-1	LFHEQMALWKF	11	41	489.2472208757947	1464.719833227584	3	489.5819396972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LFHEQM(Oxidation (M))ALWKF_	ENST00000314423.11_1_16:69166475-69170710:+|nuORF;ENST00000562237.5_1_16:69166520-69170710:+|nuORF;ENST00000566227.5_1_16:69166589-69170615:+|nuORF	18.531049691330335	0.7837198200183355	2				NaN	NaN	0	NaN	7427	3549	10976
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10979	30.448	NaN	1342.6	30	0	280.75	0.034	+			44065	TPSPPTTTM	9	46	466.72437149392516	931.4341900546503	2	466.7237854003906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TPSPPTTTM_	nc|ENSG00000198788|Q02817|MUC2;nc|ENSG00000198788|Q02817|MUC2	53.351449002276354	0.2690372970092375	2				NaN	NaN	0	NaN	7428	3549	10976
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10997	30.486	NaN	2946	30	0	1160.2	0.141	+			18836	IVAGTIVVK	9	45	450.2998586300235	898.585164326847	2	450.300048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IVAGTIVVK_	ENSG00000137414|ENST00000259963|FAM8A1	90.36981228632155	0.0638227155548745	2				NaN	NaN	0	NaN	7443	3552	10996
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11015	30.525	NaN	3478.9	30	0	397.77	0.143			+	21585	KPHTAAYKP	9	66	506.781971867454	1011.549390801708	2	506.7828063964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KPHTAAYKP_	REV__ENSG00000185267|ENST00000465530|CDNF;REV__nc|ENSG00000185267|Q49AH0-2|CDNF	44.377184641726394	0.36891676396732553	2				NaN	NaN	0	NaN	7458	3555	11014
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11033	30.563	NaN	7205.1	30	0	502.62	0.215	+			2510	APVEVTHNF	9	78	507.25571489622376	1012.4968768592475	2	507.2566223144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_APVEVTHNF_	ENSG00000005007|ENST00000262803|UPF1;nc|ENSG00000005007|Q92900|UPF1	93.1432384553994	0.056003526918089595	2				NaN	NaN	0	NaN	7473	3558	11032
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11034	30.567	NaN	4290.7	30	0	1396.1	0.106	+			44741	TTMDLPVSK	9	57	496.25992678359006	990.5053006339801	2	496.260498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTMDLPVSK_	RGS5|p.P30Ffs*54|1|0.05|ENSG00000143248|chr1:163168325-163168326|-/AA|frameshift_variant;RGS5|p.P30Lfs*54|1|0.05|ENSG00000143248|chr1:163168324-163168325|-/TA|frameshift_variant	104.01359247289065	0.03510646158778409	2				NaN	NaN	0	NaN	7474	3558	11032
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11035	30.569	NaN	2411.8	30	0	817.17	0.034	+			16530	HEVKKVTL	8	47	477.293657792447	952.572762651694	2	477.2928161621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HEVKKVTL_	ENSG00000100813|ENST00000605057|ACIN1;nc|ENSG00000100813|Q9UKV3-2|ACIN1;nc|ENSG00000100813|Q9UKV3-3|ACIN1;nc|ENSG00000100813|Q9UKV3-5|ACIN1;nc|ENSG00000100813|Q9UKV3|ACIN1	21.9598887501803	0.7897753010812679	2				NaN	NaN	0	NaN	7475	3558	11032
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11053	30.606	NaN	44290	30	0	16302	0.214				-1	 	0	70	474.74226688778555	947.4699808423711	2	474.74249267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7490	3561	11052
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11054	30.61	NaN	1903.6	30	0	534.31	0.106	+			34898	SAADIVLSK	9	49	452.2608222693821	902.5070916055643	2	452.26080322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAADIVLSK_	ENSG00000064933|ENST00000441310|PMS1;ENST00000421722.5_1_2:190656520-190720594:+|nuORF;nc|ENSG00000064933|P54277-2|PMS1;nc|ENSG00000064933|P54277-3|PMS1;nc|ENSG00000064933|P54277-4|PMS1;PMS1|p.N469Mfs*7|1|0.45|ENSG00000064933|chr2:189854675-189854675|A/-|frameshift_variant	81.52500206392136	0.09095445986635249	2				NaN	NaN	0	NaN	7491	3561	11052
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11055	30.612	NaN	3013.2	30	0	904.61	0.106	+			16531	HEVKKVTL	8	50	477.293657792447	952.572762651694	2	477.2934875488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HEVKKVTL_	ENSG00000100813|ENST00000605057|ACIN1;nc|ENSG00000100813|Q9UKV3-2|ACIN1;nc|ENSG00000100813|Q9UKV3-3|ACIN1;nc|ENSG00000100813|Q9UKV3-5|ACIN1;nc|ENSG00000100813|Q9UKV3|ACIN1	29.14955571784316	0.7342621283720113	2				NaN	NaN	0	NaN	7492	3561	11052
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11056	30.614	NaN	10831	30	0	4583.7	0.036			+	11268	FIRMFHDL	8	52	539.7788742598058	1077.5431955864115	2	539.7801513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FIRMFHDL_	REV__ENST00000264033.5_1_11:119172888-119173011:+|nuORF	35.200714571348534	0.6875396545722289	2				NaN	NaN	0	NaN	7493	3561	11052
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11074	30.651	NaN	10375	30	0	5122.6	0.214	+			18172	ILSSVSDVP	9	55	458.75258621605815	915.4906194989163	2	458.7527770996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ILSSVSDVP_	nc|ENSG00000185499|P15941-10|MUC1	31.954861631926434	0.5046124803899898	2				NaN	NaN	0	NaN	7508	3564	11073
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11075	30.655	NaN	8945	30	0	5016.9	0.106			+	-1	MLTATLFSQ	9	66	514.2608038046156	1026.5070546760312	2	514.2619018554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_M(Oxidation (M))LTATLFSQ_	REV__nc|ENSG00000226807|Q6ZUA9|MROH5	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	7509	3564	11073
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11076	30.657	NaN	22331	30	0	3414	0.106	+			42863	TEGKVGYEL	9	83	498.25532754393686	994.4961021546737	2	498.2557373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TEGKVGYEL_	ENSG00000105618|ENST00000321030|PRPF31;ENST00000466404.5_1_19:54621832-54631576:+|nuORF;nc|ENSG00000105618|Q8WWY3-2|PRPF31;nc|ENSG00000105618|Q8WWY3-3|PRPF31;nc|ENSG00000105618|Q8WWY3-4|PRPF31	65.15724298150197	0.17062369902793603	2				NaN	NaN	0	NaN	7510	3564	11073
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11077	30.659	NaN	5422.2	30	0	1513.9	0.106	+			25228	LNAHEYAL	8	61	465.73728854704325	929.4600241608865	2	465.73712158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LNAHEYAL_	tr|U7SUE9|U7SUE9_FUSNUDCDdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01210PE=4SV=1	68.484700416344	0.4195245774506064	2				NaN	NaN	0	NaN	7511	3564	11073
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11078	30.661	NaN	6293.5	30	0	3489.3	0.106	+			13193	GIAQPGVL	8	38	377.72608837566054	753.4376238181211	2	377.7265319824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GIAQPGVL_	ABCB11|p.A384Cfs*12|1|0.09|ENSG00000073734|chr2:168979913-168979914|-/A|frameshift_variant;ABCB11|p.F83Lfs*4|1|0.32|ENSG00000073734|chr2:169013412-169013412|A/-|frameshift_variant;ABCB11|p.I82V|1|0.06|ENSG00000073734|chr2:169013417-169013417|T/C|missense_variant;ABCB11|p.K1070Nfs*27|1|0.17|ENSG00000073734|chr2:168932380-168932380|T/-|frameshift_variant;ABCB11|p.Q1053Nfs*44|1|0.2|ENSG00000073734|chr2:168932434-168932434|A/-|frameshift_variant;ABCB11|p.V1293Wfs*2|2|0.26|ENSG00000073734|chr2:168923711-168923711|C/-|frameshift_variant;ENSG00000073734|ENST00000650372|ABCB11	42.47446043378293	0.6409579893742323	2				NaN	NaN	0	NaN	7512	3564	11073
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11079	30.662	NaN	1626.9	30	0	271.75	0.035	+			28786	NPEPNTVSY	9	48	510.73554398438404	NaN	0	510.7353820800781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NPEPNTVSY_	ENSG00000097021|ENST00000361521|ACOT7;nc|ENSG00000097021|O00154-2|ACOT7;nc|ENSG00000097021|O00154-3|ACOT7;nc|ENSG00000097021|O00154-4|ACOT7;nc|ENSG00000097021|O00154-5|ACOT7;nc|ENSG00000097021|O00154-6|ACOT7;nc|ENSG00000097021|O00154|ACOT7	47.657333605630114	0.2228375344433429	2				NaN	NaN	0	NaN	7513	3564	11073
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11080	30.663	NaN	536.67	30	0	211.9	0.139	+			36640	SGKPGAPGP	9	21	384.20599365234375	NaN	0	384.20599365234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SGKPGAPGP_	ENSG00000082293|ENST00000620364|COL19A1;REV__COL1A1|p.G1181Afs*58|1|0.37|ENSG00000108821|chr17:50186914-50186914|G/-|frameshift_variant;REV__COL1A1|p.G809Afs*299|2|0.43|ENSG00000108821|chr17:50190354-50190354|G/-|frameshift_variant;REV__COL1A1|p.P622Lfs*144|1|0.2|ENSG00000108821|chr17:50192807-50192807|G/-|frameshift_variant;REV__ENSG00000108821|ENST00000225964|COL1A1;REV__ENST00000471344.1_1_17:48271316-48272105:-|nuORF	18.324413293986947	0.3749620627292244	2				NaN	NaN	0	NaN	7514	3564	11073
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11098	30.702	NaN	43155	30	0	6269.9	0.127				-1	 	0	90	498.2847657389174	994.5549785446348	2	498.2849426269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7529	3567	11097
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11116	30.74	NaN	15955	30	0	2168.4	0.214	+			34544	RVLDALVAR	9	76	506.8162895616577	1011.6180261901154	2	506.81671142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVLDALVAR_	ENSG00000181029|ENST00000596148|TRAPPC5	101.45984612302182	0.0377122763612125	2				NaN	NaN	0	NaN	7544	3570	11115
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11117	30.744	NaN	709.66	30	0	152.79	0.036	+			5654	AVDNADPILK	10	33	528.2902221679688	NaN	0	528.2902221679688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVDNADPILK_	AGL|p.K1407Nfs*8|1|0.39|ENSG00000162688|chr1:99915441-99915441|A/-|frameshift_variant;AGL|p.N1304Ifs*10|1|0.38|ENSG00000162688|chr1:99912472-99912472|A/-|frameshift_variant;AGL|p.N1304Kfs*7|1|0.38|ENSG00000162688|chr1:99912471-99912472|-/A|frameshift_variant;ENSG00000162688|ENST00000361915|AGL;nc|ENSG00000162688|P35573-2|AGL;nc|ENSG00000162688|P35573-3|AGL	51.52775601994872	0.29594378441454594	2				NaN	NaN	0	NaN	7545	3570	11115
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11135	30.781	NaN	44896	30	0	17733	0.214				-1	 	0	46	372.2013872792151	742.3882216252302	2	372.2015686035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7560	3573	11134
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11136	30.785	NaN	2653.1	30	0	1482.4	0.106			+	30171	PSGGPLST	8	34	358.1858959243894	NaN	0	358.18572998046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PSGGPLST_	REV__ENST00000565652.1_1_15:75659894-75660566:-|nuORF	25.450171626174864	1.7418937515398478	2				NaN	NaN	0	NaN	7561	3573	11134
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11137	30.787	NaN	11261	30	0	2770.7	0.106				-1	 	0	58	422.26826675829926	842.5219805833985	2	422.2684020996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7562	3573	11134
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11138	30.789	NaN	1818.2	30	0	457.25	0.106	+			38982	SSSAPIVFK	9	36	468.26350307113717	934.5124532090744	2	468.263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSSAPIVFK_	ENSG00000170677|ENST00000397942|SOCS6	32.81241826257853	0.4965981579233955	2				NaN	NaN	0	NaN	7563	3573	11134
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11139	30.79	NaN	1346.4	30	0	433.27	0.106	+			36779	SIAPSLQVI	9	29	464.27865468742004	926.5427564416401	2	464.2787780761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SIAPSLQVI_	ENSG00000198793|ENST00000361445|MTOR	30.503639358989545	0.5181749237905803	2				NaN	NaN	0	NaN	7564	3573	11134
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11140	30.792	NaN	1344.9	30	0	260.94	0.035			+	-1	FIPHSSSEM	9	41	525.7320957466493	NaN	0	525.7324829101562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_FIPHSSSEM(Oxidation (M))_	REV__ENST00000260264.8_1_11:120189625-120190027:+|nuORF	26.79610172149135	0.34227917631780574	2				NaN	NaN	0	NaN	7565	3573	11134
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11141	30.793	NaN	1698	30	0	674.25	0.146	+			44225	TRQPQAKI	8	41	471.27946989672006	NaN	0	471.61505126953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TRQPQAKI_	ENSG00000168092|ENST00000527958|PAFAH1B2;ENST00000533206.1_1_11:117023163-117034692:+|nuORF;nc|ENSG00000168092|P68402-2|PAFAH1B2;nc|ENSG00000168092|P68402-4|PAFAH1B2	23.04248740728303	1.7418937515398478	2				NaN	NaN	0	NaN	7566	3573	11134
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11159	30.832	NaN	8374.9	30	0	2989.4	0.214	+			32762	RAQPRHPGTSG	11	52	582.3052782391949	1162.5960035451897	2	582.30615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RAQPRHPGTSG_	nc|ENSG00000187922|Q6JVE6|LCN10	23.52269567125451	0.7430573033454468	2				NaN	NaN	0	NaN	7581	3576	11158
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11160	30.836	NaN	6030.4	30	0	1406.3	0.106	+			44410	TSLPSAICK	9	51	460.249287668348	918.484022403496	2	460.24932861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TSLPSAICK_	ENSG00000177731|ENST00000327031|FLII;ENST00000578101.5_1_17:18148454-18160363:-|nuORF;FLII|p.K628Rfs*27|1|0.37|ENSG00000177731|chr17:18249178-18249178|T/-|frameshift_variant;FLII|p.S470Afs*32|1|0.36|ENSG00000177731|chr17:18251454-18251454|G/-|frameshift_variant;nc|ENSG00000177731|Q13045-2|FLII;nc|ENSG00000177731|Q13045-3|FLII	82.24051045832904	0.08786059719216216	2				NaN	NaN	0	NaN	7582	3576	11158
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11161	30.838	NaN	2680.6	30	0	1114.3	0.034	+			17548	IDTELEGR	8	51	466.73744976248753	931.4603465917751	2	466.7376403808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IDTELEGR_	ENSG00000116962|ENST00000264187|NID1;nc|ENSG00000116962|P14543-2|NID1	65.80317337860623	0.44433089765398776	2				NaN	NaN	0	NaN	7583	3576	11158
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11179	30.875	NaN	2590	30	0	1037	0.214	+			32137	QSLTLPETL	9	45	501.27915561821436	NaN	0	501.2791748046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QSLTLPETL_	ENST00000593740.2_1_19:42929059-42989297:+|nuORF;ENST00000594688.1_1_19:42929068-42929311:+|nuORF	32.81241826257853	0.3119040447479903	2				NaN	NaN	0	NaN	7598	3579	11178
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11180	30.879	NaN	1224	30	0	311.72	0.035	+			39076	SSSSAPIVFK	10	32	511.7789878899894	1021.5434228467789	2	511.7792663574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSSSAPIVFK_	ENSG00000170677|ENST00000397942|SOCS6	52.936696900407355	0.4300801048568001	2				NaN	NaN	0	NaN	7599	3579	11178
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11198	30.914	NaN	6620.2	30	0	3209.5	0.214				-1	 	0	64	482.75795787759597	963.501362821992	2	482.758056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7614	3582	11197
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11199	30.917	NaN	2339.8	30	0	538.14	0.034			+	26089	LSMTVAAQL	9	39	467.2571800937585	932.499807254317	2	467.257568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSMTVAAQL_	REV__ENSG00000066427|ENST00000644486|ATXN3;REV__nc|ENSG00000066427|P54252-3|ATXN3;REV__nc|ENSG00000066427|P54252-4|ATXN3;REV__nc|ENSG00000066427|P54252-5|ATXN3	40.77816245573522	0.41113185337114944	2				NaN	NaN	0	NaN	7615	3582	11197
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11217	30.954	NaN	1713.4	30	0	207.27	0.143	+			20433	KEVADAIRL	9	45	507.800418196109	1013.586283459018	2	507.80120849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEVADAIRL_	ENSG00000078808|ENST00000360001|SDF4;nc|ENSG00000078808|Q9BRK5-2|SDF4;nc|ENSG00000078808|Q9BRK5-3|SDF4;nc|ENSG00000078808|Q9BRK5-4|SDF4;nc|ENSG00000078808|Q9BRK5-6|SDF4;nc|ENSG00000078808|Q9BRK5|SDF4	72.87924865735499	0.12833875048249987	2				NaN	NaN	0	NaN	7630	3585	11216
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11235	30.992	NaN	1187200	30	0	824040	0.148	+			37391	SLGAFVTLQR	10	83	364.5446554817886	1090.6121370455658	3	364.5450744628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLGAFVTLQR_	nc|ENSG00000131095|P14136-2|GFAP	64.20726635412375	0.3275756395432415	2				NaN	NaN	0	NaN	7645	3588	11234
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11236	30.995	NaN	89702	30	0	33651	0.106	+			10906	FDGRVVAK	8	91	446.25574080582305	890.4969286784461	2	446.25579833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FDGRVVAK_	ENSG00000143183|ENST00000367881|TMCO1;nc|ENSG00000143183|Q9UM00-2|TMCO1;nc|ENSG00000143183|Q9UM00|TMCO1	110.11987700582712	0.24509564897437786	2				NaN	NaN	0	NaN	7646	3588	11234
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11237	30.997	NaN	6749.4	30	0	803.63	0.106	+			43983	TPGGTRIIY	9	67	489.2743585307999	976.5341641283998	2	489.2743835449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TPGGTRIIY_	ENSG00000148730|ENST00000373218|EIF4EBP2;ENSG00000187840|ENST00000338825|EIF4EBP1;ENSG00000243056|ENST00000310331|EIF4EBP3	90.60085204095205	0.06317133949006545	2				NaN	NaN	0	NaN	7647	3588	11234
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11238	30.999	NaN	3173.5	30	0	1000.5	0.106				-1	 	0	36	315.20786365016136	628.4011743671227	2	315.208251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7648	3588	11234
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11239	31	NaN	4164.1	30	0	696.63	0.106	+			36827	SIFDGRVVAK	10	63	546.3132780675995	1090.612003201999	2	546.3141479492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SIFDGRVVAK_	ENSG00000143183|ENST00000367881|TMCO1;nc|ENSG00000143183|Q9UM00-2|TMCO1;nc|ENSG00000143183|Q9UM00|TMCO1	101.45984612302182	0.07336148045341315	2				NaN	NaN	0	NaN	7649	3588	11234
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11240	31.002	NaN	1832.4	30	0	595.95	0.106				-1	AELCRYLSK	9	32	380.53302001953125	NaN	0	380.53302001953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_AELC(Carbamidomethyl (C))RYLSK_	ENSG00000169609|ENST00000304177|C15orf40;ENST00000565725.1_1_15:83677164-83680359:-|nuORF;nc|nan|Q8WUR7-2|C15orf40;nc|nan|Q8WUR7-3|C15orf40	24.519189625965996	0.35377483217337163	2				NaN	NaN	0	NaN	7650	3588	11234
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11241	31.004	NaN	6571	30	0	800.29	0.035	+			17828	IFDGRVVAK	9	62	502.7973833735139	1003.5802138138279	2	502.79754638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IFDGRVVAK_	ENSG00000143183|ENST00000367881|TMCO1;nc|ENSG00000143183|Q9UM00-2|TMCO1;nc|ENSG00000143183|Q9UM00|TMCO1	117.5257442709337	0.022697614825424036	2				NaN	NaN	0	NaN	7651	3588	11234
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11242	31.005	NaN	692.16	30	0	109.25	0.14	+			33461	RIQLPVVSK	9	38	520.3349609375	NaN	0	520.3349609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_RIQLPVVSK_	chr10:128113602-128116491|398|11.56|0.71|4.03|-|ENST00000368653|MKI67,MKI67;ENSG00000148773|ENST00000368654|MKI67;MKI67|p.K319Rfs*27|1|0.35|ENSG00000148773|chr10:128115454-128115454|C/-|frameshift_variant;MKI67|p.L2374*|1|0.28|ENSG00000148773|chr10:128104719-128104719|A/-|frameshift_variant;MKI67|p.L783Hfs*49|1|0.05|ENSG00000148773|chr10:128110447-128110448|-/TG|frameshift_variant;MKI67|p.L783Yfs*49|1|0.05|ENSG00000148773|chr10:128110446-128110447|-/GT|frameshift_variant;MKI67|p.R3036Yfs*27|1|0.04|ENSG00000148773|chr10:128102735-128102736|-/AAAATAA|frameshift_variant;MKI67|p.T672Nfs*4|1|0.25|ENSG00000148773|chr10:128112000-128112001|-/T|frameshift_variant;nc|ENSG00000148773|P46013-2|MKI67	38.753607047826485	0.28190821760017076	2				NaN	NaN	0	NaN	7652	3588	11234
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11277	31.078	NaN	3945	30	0	588.46	0.214			+	12079	GAAKAQAK	8	43	372.72162775205317	NaN	0	372.7215576171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GAAKAQAK_	REV__ENST00000243189.11_1_1:25573353-25573824:-|nuORF	52.29916861842294	1.7418937515398478	2				NaN	NaN	0	NaN	7681	3594	11276
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11278	31.082	NaN	6029.4	30	0	1532	0.034			+	44369	TSLAETGLK	9	65	460.25694072024237	918.4993285072848	2	460.25726318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TSLAETGLK_	REV__ADGRL3|p.H1275Lfs*11|1|0.08|ENSG00000150471|chr4:62070322-62070322|A/-|frameshift_variant;REV__ADGRL3|p.S1005Nfs*24|1|0.05|ENSG00000150471|chr4:61983584-61983585|-/ACATCCAG|frameshift_variant;REV__ADGRL3|p.W832Lfs*13|1|0.39|ENSG00000150471|chr4:61948167-61948168|-/T|frameshift_variant;REV__ADGRL3|p.Y966Lfs*9|1|0.19|ENSG00000150471|chr4:61983464-61983465|-/T|frameshift_variant;REV__ENSG00000150471|ENST00000683033|ADGRL3;REV__nc|ENSG00000150471|Q9HAR2-2|ADGRL3;REV__nc|ENSG00000150471|Q9HAR2-4|ADGRL3;REV__nc|ENSG00000150471|Q9HAR2|ADGRL3	47.95952297671804	0.32689736945648856	2				NaN	NaN	0	NaN	7682	3594	11276
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11296	31.118	NaN	758.98	30	0	260.89	0.214	+			478	AAVVYDFLSR	10	38	570.805793878382	NaN	0	570.8060913085938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAVVYDFLSR_	CYP2R1|p.N289Mfs*12|1|0.17|ENSG00000186104|chr11:14880270-14880270|T/-|frameshift_variant;CYP2R1|p.T463Yfs*14|1|0.28|ENSG00000186104|chr11:14878241-14878242|-/A|frameshift_variant;ENSG00000186104|ENST00000334636|CYP2R1	20.94693142431847	0.4201028297492154	2				NaN	NaN	0	NaN	7697	3597	11295
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11297	31.122	NaN	686.79	30	0	137.83	0.106	+			48626	VTSKALEL	8	33	430.758305545034	NaN	0	430.75775146484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTSKALEL_	ENSG00000100979|ENST00000372431|PLTP;nc|ENSG00000100979|P55058-2|PLTP;nc|ENSG00000100979|P55058-3|PLTP	42.396135135203025	1.7418937515398478	2				NaN	NaN	0	NaN	7698	3597	11295
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11298	31.124	NaN	1187.8	30	0	292.34	0.106	+			606	ADQVTVLLC	9	35	481.2542833040163	960.4940136748327	2	481.25494384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ADQVTVLLC_	ENST00000566470.1_1_16:30216115-30216589:-|nuORF	29.14955571784316	0.5308295550522326	2				NaN	NaN	0	NaN	7699	3597	11295
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11299	31.126	NaN	669.98	30	0	211.51	0.106	+			37520	SLLMWLTPL	9	24	358.5414298855625	1072.6024602568875	3	358.8755187988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLLMWLTPL_	nc|ENSG00000186174|Q86UU0-3|BCL9L	25.450171626174864	0.5654022654467333	2				NaN	NaN	0	NaN	7700	3597	11295
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11300	31.128	NaN	1014.7	30	0	338.31	0.106	+			36986	SINSGIRSLRH	11	24	413.9008269907082	NaN	0	414.23486328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SINSGIRSLRH_	ENSG00000177324|ENST00000380033|BEND2	22.561587123415745	0.456735970842152	2				NaN	NaN	0	NaN	7701	3597	11295
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11301	31.129	NaN	369.81	30	0	61.862	0.034			+	30092	PQVKCFLL	8	28	474.2742004394531	NaN	0	474.2742004394531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PQVKCFLL_	REV__ALG10|p.F162Lfs*4|1|0.18|ENSG00000139133|chr12:34025975-34025975|T/-|frameshift_variant;REV__ALG10|p.S296Ffs*15|2|0.29|ENSG00000139133|chr12:34026372-34026373|-/T|frameshift_variant;REV__ALG10|p.S296Hfs*23|3|0.26|ENSG00000139133|chr12:34026373-34026373|T/-|frameshift_variant;REV__ENSG00000139133|ENST00000266483|ALG10	14.664097394203935	1.7418937515398478	2				NaN	NaN	0	NaN	7702	3597	11295
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11319	31.167	NaN	1621.2	30	0	664.7	0.214				-1	 	0	33	372.2013872792151	742.3882216252302	2	372.2015380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7717	3600	11318
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11320	31.171	NaN	2492.8	30	0	417.27	0.035				-1	 	0	61	517.7802458890616	1033.545938844923	2	517.7818603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7718	3600	11318
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11338	31.208	NaN	12276	30	0	4691.9	0.214	+			45313	TVSELVISK	9	61	488.2892776110484	974.5640022888969	2	488.28936767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVSELVISK_	ENSG00000189180|ENST00000432900|ZNF33A;ENSG00000196693|ENST00000359467|ZNF33B;nc|ENSG00000189180|Q06730-3|ZNF33A;nc|ENSG00000189180|Q06730|ZNF33A;ZNF33A|p.E689Rfs*83|1|0.35|ENSG00000189180|chr10:38056188-38056188|G/-|frameshift_variant;ZNF33A|p.Y580Cfs*21|1|0.05|ENSG00000189180|chr10:38055865-38055866|-/GTGTGTGTTCTCTG|frameshift_variant	163.1509380574825	0.003936019289634439	2				NaN	NaN	0	NaN	7733	3603	11337
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11339	31.211	NaN	1138.1	30	0	229.69	0.106				-1	VSTGCILLG	9	33	460.2494716742396	918.4843904152792	2	460.25	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_VSTGC(Carbamidomethyl (C))ILLG_	ENSG00000101294|ENST00000398174|HM13;ENST00000460389.5_1_20:30136650-30157019:+|nuORF;ENST00000464173.5_1_20:30136866-30137929:+|nuORF;ENST00000472128.5_1_20:30136905-30155443:+|nuORF;ENST00000483310.5_1_20:30136863-30150236:+|nuORF;ENST00000492709.5_1_20:30132820-30157019:+|nuORF;nc|ENSG00000101294|Q8TCT9-4|HM13;nc|ENSG00000101294|Q8TCT9|HM13	40.5726180659479	0.4135428067754104	2				NaN	NaN	0	NaN	7734	3603	11337
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11340	31.213	NaN	973.39	30	0	374.28	0.106	+			46388	VELIKDTK	8	37	473.2830231322871	944.5514933313742	2	473.2838439941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VELIKDTK_	PPP1R3F|p.E571K|1|0.24|ENSG00000049769|chrX:49286401-49286401|G/A|missense_variant	38.80614096846853	0.6637206697844082	2				NaN	NaN	0	NaN	7735	3603	11337
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11341	31.215	NaN	198.22	30	0	31.106	0.033	+			34887	SAAAALVLK	9	17	422.2683410644531	NaN	0	422.2683410644531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SAAAALVLK_	ENSG00000137076|ENST00000314888|TLN1;nc|ENSG00000137076|Q9Y490-2|TLN1;TLN1|p.P1628Rfs*20|1|0.44|ENSG00000137076|chr9:35707144-35707144|G/-|frameshift_variant	29.14955571784316	0.3303970763161698	2				NaN	NaN	0	NaN	7736	3603	11337
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11376	31.29	NaN	6927	30	0	881.57	0.142			+	29354	PAAPRQPGR	9	69	475.2705488033933	948.5265446735866	2	475.2710266113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PAAPRQPGR_	REV__ENST00000323813.3_1_18:657878-658316:-|nuORF;REV__nc|ENSG00000176912|Q8TAI1|TYMSOS	52.29916861842294	0.2778091507991977	2				NaN	NaN	0	NaN	7765	3609	11375
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11394	31.329	NaN	7465	30	0	3063.5	0.214				-1	 	0	27	350.2063695385393	698.3981861438787	2	350.20660400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7780	3612	11393
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11395	31.333	NaN	1064.9	30	0	116.9	0.035	+			16036	HAVETVVNM	9	50	500.2500825902245	NaN	0	500.2492980957031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HAVETVVNM_	DOCK9|p.N1450Mfs*6|1|0.28|ENSG00000088387|chr13:98831683-98831683|T/-|frameshift_variant;DOCK9|p.T1335Yfs*4|2|0.43|ENSG00000088387|chr13:98850057-98850058|-/A|frameshift_variant;ENSG00000088387|ENST00000682017|DOCK9;nc|ENSG00000088387|Q9BZ29-3|DOCK9;nc|ENSG00000088387|Q9BZ29-4|DOCK9;nc|ENSG00000088387|Q9BZ29-5|DOCK9;nc|ENSG00000088387|Q9BZ29-6|DOCK9;nc|ENSG00000088387|Q9BZ29|DOCK9	44.116797842482775	0.2472372736944149	2				NaN	NaN	0	NaN	7781	3612	11393
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11413	31.37	NaN	23475	30	0	14439	0.214				-1	 	0	51	336.190737172429	670.366921411658	2	336.1909484863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7796	3615	11412
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11414	31.373	NaN	24769	30	0	16271	0.106	+			36835	SIFDVQVKR	9	46	364.5446554817886	1090.6121370455658	3	364.5447692871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SIFDVQVKR_	tr|U7SU81|U7SU81_FUSNUAlpha-1,4glucanphosphorylaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01135PE=3SV=1	30.503639358989545	0.5181749237905803	2				NaN	NaN	0	NaN	7797	3615	11412
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11415	31.375	NaN	2239.1	30	0	944.98	0.033	+			10907	FDGRVVAK	8	48	446.25574080582305	890.4969286784461	2	446.255615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FDGRVVAK_	ENSG00000143183|ENST00000367881|TMCO1;nc|ENSG00000143183|Q9UM00-2|TMCO1;nc|ENSG00000143183|Q9UM00|TMCO1	79.71258880314673	0.32596852995588826	2				NaN	NaN	0	NaN	7798	3615	11412
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11433	31.412	NaN	1613.9	30	0	433.65	0.144	+			25545	LPVEGGKGGEF	11	47	545.2825699583597	NaN	0	545.2819213867188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LPVEGGKGGEF_	ENSG00000112159|ENST00000369393|MDN1;MDN1|p.E2692*|2|0.32|ENSG00000112159|chr6:89706133-89706134|-/A|frameshift_variant;MDN1|p.F2691Lfs*7|2|0.37|ENSG00000112159|chr6:89706134-89706134|A/-|frameshift_variant;MDN1|p.K2642Nfs*17|2|0.29|ENSG00000112159|chr6:89707449-89707449|T/-|frameshift_variant;MDN1|p.L4077Cfs*15|1|0.16|ENSG00000112159|chr6:89680625-89680625|G/-|frameshift_variant;MDN1|p.L5278Ffs*6|1|0.18|ENSG00000112159|chr6:89652273-89652274|-/A|frameshift_variant	72.2432373244024	0.1201030593886154	2				NaN	NaN	0	NaN	7813	3618	11432
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11451	31.451	NaN	5634.6	30	0	1136	0.143	+			47936	VSMDYAISK	9	69	507.25171938187134	1012.4888858305427	2	507.2522888183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSMDYAISK_	ENSG00000196453|ENST00000247930|ZNF777;ZNF777|p.P504Rfs*5|1|0.44|ENSG00000196453|chr7:149432761-149432761|G/-|frameshift_variant	134.7655990226056	0.012935733000282069	2				NaN	NaN	0	NaN	7828	3621	11450
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11469	31.489	NaN	12267	30	0	1265	0.142	+			16108	HDLVIKSL	8	76	462.77904481367756	923.5435366941551	2	462.7790222167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HDLVIKSL_	ENSG00000100342|ENST00000397278|APOL1;nc|ENSG00000100342|O14791-2|APOL1;nc|ENSG00000100342|O14791-3|APOL1	152.47061609516894	0.18319083952648163	2				NaN	NaN	0	NaN	7843	3624	11468
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11487	31.528	NaN	25379	30	0	18350	0.214				-1	 	0	51	372.2013994703352	742.3882460074705	2	372.2016296386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7858	3627	11486
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11488	31.531	NaN	8129.6	30	0	4038.9	0.106			+	24763	LHYRLGSSG	9	38	495.26079556877545	988.5070382043509	2	495.2608337402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LHYRLGSSG_	REV__ENSG00000197483|ENST00000598519|ZNF628;REV__ZNF628|p.Q661Sfs*63|1|0.35|ENSG00000197483|chr19:55483170-55483170|C/-|frameshift_variant	17.364965105453717	0.6112419832031293	2				NaN	NaN	0	NaN	7859	3627	11486
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11489	31.533	NaN	2146.4	30	0	694.34	0.106	+			3271	ASLPGGVLK	9	41	421.260387740566	840.506222547932	2	421.2605895996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASLPGGVLK_	ENSG00000185477|ENST00000609438|GPRIN3;GPRIN3|p.Q666Afs*23|1|0.42|ENSG00000185477|chr4:89248116-89248117|-/T|frameshift_variant	58.78195531508484	0.22376836668196862	2				NaN	NaN	0	NaN	7860	3627	11486
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11490	31.535	NaN	1797.3	30	0	721.58	0.035	+			30839	QEFVSRTL	8	41	490.2632669356064	978.5119809380128	2	490.263427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QEFVSRTL_	ENSG00000132470|ENST00000200181|ITGB4;nc|ENSG00000132470|P16144-2|ITGB4;nc|ENSG00000132470|P16144-3|ITGB4;nc|ENSG00000132470|P16144-4|ITGB4	65.46538089061403	0.44767499471257033	2				NaN	NaN	0	NaN	7861	3627	11486
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11508	31.572	NaN	2895.8	30	0	2159.3	0.14	+			36721	SGTTVIHL	8	29	414.23472169968295	NaN	0	414.23455810546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SGTTVIHL_	ENSG00000196159|ENST00000394329|FAT4;FAT4|p.D3606Sfs*31|1|0.07|ENSG00000196159|chr4:125451831-125451832|-/AGTAAAGG|frameshift_variant;FAT4|p.E3388Gfs*4|1|0.35|ENSG00000196159|chr4:125451179-125451179|A/-|frameshift_variant;FAT4|p.E4539Rfs*31|1|0.12|ENSG00000196159|chr4:125490431-125490431|C/-|frameshift_variant;FAT4|p.K4477Rfs*15|1|0.36|ENSG00000196159|chr4:125490247-125490247|G/-|frameshift_variant;FAT4|p.K4532Efs*21|1|0.37|ENSG00000196159|chr4:125490410-125490411|-/G|frameshift_variant;FAT4|p.K4532Rfs*38|1|0.19|ENSG00000196159|chr4:125490411-125490411|G/-|frameshift_variant;FAT4|p.L3734Ffs*22|1|0.27|ENSG00000196159|chr4:125452211-125452212|-/T|frameshift_variant;FAT4|p.L3734Yfs*8|2|0.3|ENSG00000196159|chr4:125452212-125452212|T/-|frameshift_variant;FAT4|p.Q4906Rfs*14|1|0.49|ENSG00000196159|chr4:125491536-125491536|C/-|frameshift_variant;FAT4|p.T3555Pfs*6|1|0.21|ENSG00000196159|chr4:125451679-125451679|A/-|frameshift_variant;nc|ENSG00000196159|Q6V0I7-2|FAT4;nc|ENSG00000196159|Q6V0I7-3|FAT4;nc|ENSG00000196159|Q6V0I7|FAT4	62.97842346883844	1.7418937515398478	2				NaN	NaN	0	NaN	7876	3630	11507
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11526	31.611	NaN	7100.9	30	0	4176.5	0.214	+			15954	HAGPVINTL	9	46	461.26135968786946	920.5081664425389	2	461.2613220214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HAGPVINTL_	CREBBP|p.Q2411Sfs*2|1|0.24|ENSG00000005339|chr16:3727816-3727816|G/-|frameshift_variant;ENSG00000005339|ENST00000262367|CREBBP;nc|ENSG00000005339|Q92793-2|CREBBP	42.396135135203025	0.392153681582562	2				NaN	NaN	0	NaN	7891	3633	11525
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11527	31.614	NaN	3936.6	30	0	504.23	0.033			+	17205	HVGAPLNPV	9	53	452.25615866207556	902.4977643909511	2	452.2563171386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HVGAPLNPV_	REV__ENSG00000172379|ENST00000303329|ARNT2;REV__nc|ENSG00000172379|Q9HBZ2-2|ARNT2	60.29395666154354	0.21116425950210296	2				NaN	NaN	0	NaN	7892	3633	11525
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11545	31.651	NaN	4283	30	0	416.69	0.214	+			35134	SAIAAVIAR	9	53	436.27038478706504	NaN	0	436.2715148925781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAIAAVIAR_	ENSG00000165949|ENST00000612813|IFI27;nc|ENSG00000165949|P40305-1|IFI27;nc|ENSG00000165949|P40305-3|IFI27;nc|ENSG00000165949|P40305-4|IFI27	98.62937762414208	0.024200618960070384	2				NaN	NaN	0	NaN	7907	3636	11544
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11546	31.654	NaN	1333.4	30	0	296.56	0.106			+	43724	TKTLYLCL	8	41	477.7709578048684	NaN	0	477.7710266113281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TKTLYLCL_	REV__ENST00000558265.5_2_14:103800742-103802258:+|nuORF;REV__ENST00000558316.5_2_14:103800742-103802173:+|nuORF;REV__ENST00000560763.5_2_14:103800742-103802031:+|nuORF	38.80614096846853	1.7418937515398478	2				NaN	NaN	0	NaN	7908	3636	11544
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11547	31.656	NaN	4615.5	30	0	1177.5	0.106	+			18990	IVTKLDDK	8	51	466.27664606806263	930.5387392029253	2	466.27618408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IVTKLDDK_	ENSG00000180113|ENST00000316081|TDRD6;nc|ENSG00000180113|O60522-2|TDRD6;TDRD6|p.L1636Qfs*6|1|0.06|ENSG00000180113|chr6:46693034-46693035|-/AAAG|frameshift_variant;TDRD6|p.N917Ifs*2|1|0.35|ENSG00000180113|chr6:46690872-46690872|A/-|frameshift_variant	45.97224482568171	0.6192535143389125	2				NaN	NaN	0	NaN	7909	3636	11544
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11548	31.658	NaN	1040.4	30	0	315.32	0.034	+			18612	ISSGTVSVPI	10	28	480.27409352715597	958.533634121112	2	480.2748107910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ISSGTVSVPI_	ENST00000340001.8_1_17:67045563-67045629:-|nuORF	32.81241826257853	0.6118718159329168	2				NaN	NaN	0	NaN	7910	3636	11544
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11583	31.734	NaN	5833.6	30	0	3710.2	0.214				-1	SIMCLILLL	9	34	364.5446554817886	1090.6121370455658	3	364.5453186035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_SIM(Oxidation (M))C(Carbamidomethyl (C))LILLL_	ENST00000472149.1_1_3:197475113-197475194:-|nuORF	26.69291269510374	0.5537881896960711	2				NaN	NaN	0	NaN	7939	3642	11582
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11584	31.737	NaN	4962.4	30	0	1209	0.033			+	26533	LTQVSAPAL	9	64	450.2633913855541	898.5122298379082	2	450.2635192871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LTQVSAPAL_	REV__ENSG00000080603|ENST00000262518|SRCAP;REV__nc|ENSG00000080603|Q6ZRS2-2|SRCAP;REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP;REV__SRCAP|p.K2179Rfs*128|1|0.2|ENSG00000080603|chr16:30733930-30733930|A/-|frameshift_variant;REV__SRCAP|p.L2975*|1|0.31|ENSG00000080603|chr16:30738960-30738960|C/-|frameshift_variant;REV__SRCAP|p.P1878Hfs*89|2|0.36|ENSG00000080603|chr16:30725050-30725050|C/-|frameshift_variant;REV__SRCAP|p.P1879Tfs*21|1|0.46|ENSG00000080603|chr16:30725049-30725050|-/C|frameshift_variant;REV__SRCAP|p.R1871Gfs*96|1|0.19|ENSG00000080603|chr16:30725031-30725031|C/-|frameshift_variant;REV__SRCAP|p.R2548Efs*3|1|0.36|ENSG00000080603|chr16:30737668-30737669|-/C|frameshift_variant;REV__SRCAP|p.S1859Afs*108|1|0.25|ENSG00000080603|chr16:30724993-30724993|C/-|frameshift_variant	65.46538089061403	0.16805504838372562	2				NaN	NaN	0	NaN	7940	3642	11582
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11602	31.774	NaN	5124.6	30	0	1266	0.214	+			25858	LSFDRILKK	9	47	373.9007229393725	1118.6803394183175	3	373.90118408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSFDRILKK_	ENSG00000162434|ENST00000342505|JAK1;JAK1|p.K860Nfs*16|3|0.29|ENSG00000162434|chr1:64841314-64841314|T/-|frameshift_variant	28.081489160057373	0.5408112046645406	2				NaN	NaN	0	NaN	7955	3645	11601
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11603	31.778	NaN	3560.2	30	0	1044.4	0.106	+			27758	MQYALAVSK	9	54	505.7707096647133	NaN	0	505.7709045410156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MQYALAVSK_	ENSG00000241945|ENST00000291576|PWP2	93.5975768576971	0.03434413464716124	2				NaN	NaN	0	NaN	7956	3645	11601
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11604	31.78	NaN	2489.6	30	0	694.3	0.106	+			50036	WEEAAHDL	8	55	485.71649902615246	969.418445119105	2	485.7167663574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_WEEAAHDL_	ENSG00000100380|ENST00000216218|ST13;nc|ENSG00000212789|Q8NFI4|ST13P5;nc|ENSG00000232150|Q8IZP2|ST13P4;ST13|p.G306Efs*50|1|0.18|ENSG00000100380|chr22:40827160-40827160|C/-|frameshift_variant	71.29570347882199	0.39610197767395533	2				NaN	NaN	0	NaN	7957	3645	11601
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11605	31.782	NaN	2663.5	30	0	486.77	0.106	+			24044	LEGKLATL	8	46	422.76071225584195	NaN	0	422.7607727050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LEGKLATL_	ENSG00000196535|ENST00000527372|MYO18A;nc|ENSG00000196535|Q92614-2|MYO18A;nc|ENSG00000196535|Q92614-3|MYO18A;nc|ENSG00000196535|Q92614-4|MYO18A;nc|ENSG00000196535|Q92614-5|MYO18A	79.45101966838831	1.7418937515398478	2				NaN	NaN	0	NaN	7958	3645	11601
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11606	31.783	NaN	538.01	30	0	153.74	0.033	+			11176	FGRVITAQ	8	32	446.2557369502343	NaN	0	446.25628662109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FGRVITAQ_	ENSG00000163705|ENST00000450660|FANCD2OS	29.14955571784316	1.7418937515398478	2				NaN	NaN	0	NaN	7959	3645	11601
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11658	31.898	NaN	1654.6	30	0	481.86	0.215	+			27700	MPWQCGCQR	9	46	554.7272601713647	1107.4399674095293	2	554.727783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MPWQCGCQR_	ENST00000530758.1_1_3:10168359-10168521:+|nuORF	24.20275056022122	0.577060078256802	2				NaN	NaN	0	NaN	8002	3654	11657
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11659	31.901	NaN	2078.2	30	0	1111.9	0.033	+			36982	SINLTLTK	8	40	445.27139735603095	888.5282417788619	2	445.2711486816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SINLTLTK_	ENSG00000197181|ENST00000356766|PIWIL2;nc|ENSG00000197181|Q8TC59-2|PIWIL2	51.33545320467046	0.5859736979383976	2				NaN	NaN	0	NaN	8003	3654	11657
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11677	31.938	NaN	2730.3	30	0	372.09	0.141	+			31037	QEVGQVSV	8	44	423.2218705979805	844.429188262761	2	423.2221374511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QEVGQVSV_	ENSG00000138448|ENST00000261023|ITGAV;ITGAV|p.G401Efs*13|1|0.4|ENSG00000138448|chr2:186646721-186646721|A/-|frameshift_variant;ITGAV|p.G561Dfs*2|4|0.23|ENSG00000138448|chr2:186656358-186656358|G/-|frameshift_variant;ITGAV|p.V806Hfs*11|1|0.07|ENSG00000138448|chr2:186667758-186667759|-/CATTTTCAAAA|frameshift_variant;nc|ENSG00000138448|P06756-2|ITGAV;nc|ENSG00000138448|P06756-3|ITGAV	82.24051045832904	0.30490469762271794	2				NaN	NaN	0	NaN	8018	3657	11676
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11695	31.976	NaN	2018	30	0	965.81	0.142	+			30793	QEALAAARL	9	43	471.77169871932296	941.5288445054459	2	471.77191162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QEALAAARL_	ENSG00000131871|ENST00000526049|SELENOS;ENST00000398226.7_1_15:101812984-101817622:-|nuORF;ENST00000526043.1_1_15:101815456-101816896:-|nuORF;ENST00000527833.5_1_15:101814760-101817622:-|nuORF;ENST00000529968.1_1_15:101815456-101817667:-|nuORF;ENST00000531964.5_1_15:101812984-101817507:-|nuORF	37.81151784470057	0.4459294069877048	2				NaN	NaN	0	NaN	8033	3660	11694
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11713	32.015	NaN	865.38	30	0	109.69	0.214	+			43196	TEVGSVSEV	9	32	453.7243957519531	NaN	0	453.7243957519531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEVGSVSEV_	ENSG00000079819|ENST00000337057|EPB41L2;nc|ENSG00000079819|O43491-2|EPB41L2;nc|ENSG00000079819|O43491-3|EPB41L2;nc|ENSG00000079819|O43491-4|EPB41L2	56.72105179125745	0.16330365735109603	2				NaN	NaN	0	NaN	8048	3663	11712
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11714	32.019	NaN	199.27	30	0	31.81	0.106			+	44161	TQPDVTGL	8	14	415.7166442871094	NaN	0	415.7166442871094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TQPDVTGL_	REV__nc|ENSG00000112511|O43189-2|PHF1	13.775330524044264	1.7418937515398478	2				NaN	NaN	0	NaN	8049	3663	11712
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11715	32.021	NaN	826.37	30	0	130.89	0.034			+	28898	NQKSLAVIV	9	41	486.29766845703125	NaN	0	486.29766845703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NQKSLAVIV_	REV__nc|ENSG00000155085|Q5TCS8-6|AK9	53.351449002276354	0.18359631779194618	2				NaN	NaN	0	NaN	8050	3663	11712
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11733	32.058	NaN	3021.2	30	0	789.07	0.143	+			38140	SQAEALLMK	9	51	495.76803401887264	989.5215151045453	2	495.7685241699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SQAEALLMK_	ENSG00000169519|ENST00000407364|METTL15;nc|ENSG00000169519|A6NJ78-2|METTL15;nc|ENSG00000169519|A6NJ78-4|METTL15;nc|ENSG00000174912|P0C7V9|METTL15P1	140.11223852658463	0.010427410095706195	2				NaN	NaN	0	NaN	8065	3666	11732
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11751	32.097	NaN	7122.8	30	0	2369.7	0.214	+			27941	MVGKTFTY	8	56	473.7382213887395	945.461889844279	2	473.7386779785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MVGKTFTY_	CYP51A1|p.L333Wfs*13|1|0.15|ENSG00000001630|chr7:92123208-92123208|A/-|frameshift_variant;ENSG00000001630|ENST00000003100|CYP51A1;ENST00000419457.1_1_13:29297642-29297861:-|nuORF;nc|ENSG00000001630|Q16850-2|CYP51A1	84.9155231211612	0.2928622555056503	2				NaN	NaN	0	NaN	8080	3669	11750
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11752	32.1	NaN	11217	30	0	7066.4	0.038	+			49751	VYPEKLATKF	10	39	399.22863947815114	1194.6640890346534	3	399.22845458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYPEKLATKF_	ENSG00000136813|ENST00000684092|ECPAS;nc|ENSG00000136813|Q5VYK3|ECPAS	22.579656572578934	0.6954366826851017	2				NaN	NaN	0	NaN	8081	3669	11750
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11770	32.137	NaN	1696.7	30	0	296.81	0.214			+	2105	ALGCSTCRP	9	49	454.2110838022224	NaN	0	454.2111511230469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ALGCSTCRP_	REV__VRTN|p.A151Pfs*224|1|0.42|ENSG00000133980|chr14:74357228-74357228|C/-|frameshift_variant	63.30626980617807	0.13521764763214936	2				NaN	NaN	0	NaN	8096	3672	11769
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11771	32.14	NaN	4418.5	30	0	2855.1	0.037				-1	VTMIIAVCIL	10	23	364.5446554817886	1090.6121370455658	3	364.5449523925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_VTM(Oxidation (M))IIAVCIL_	ENST00000523831.1_1_8:101513253-101513298:+|nuORF	17.468008924990375	0.7276870902328821	2				NaN	NaN	0	NaN	8097	3672	11769
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11789	32.178	NaN	11557	30	0	1694.3	0.214	+			36659	SGMDVTIVK	9	71	475.25428130537495	948.4940096775499	2	475.25469970703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SGMDVTIVK_	ENSG00000006530|ENST00000649286|AGK;ENST00000465241.5_1_7:141255266-141315366:+|nuORF	114.8945686534367	0.024290463251177924	2				NaN	NaN	0	NaN	8112	3675	11788
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11790	32.181	NaN	1544	30	0	310.13	0.106	+			37697	SLSLQMFQS	9	39	520.7584496191669	NaN	0	520.7583618164062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLSLQMFQS_	CMYA5|p.M1226Wfs*13|1|0.22|ENSG00000164309|chr5:79732436-79732436|A/-|frameshift_variant	32.81241826257853	0.3119040447479903	2				NaN	NaN	0	NaN	8113	3675	11788
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11791	32.183	NaN	864.47	30	0	185.39	0.106	+			10335	ETSWSAVL	8	38	446.72393798828125	NaN	0	446.72393798828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ETSWSAVL_	ENSG00000185008|ENST00000696593|ROBO2;nc|ENSG00000185008|Q9HCK4-2|ROBO2;nc|ENSG00000185008|Q9HCK4-3|ROBO2;nc|ENSG00000185008|Q9HCK4|ROBO2;ROBO2|p.G821Wfs*7|1|0.37|ENSG00000185008|chr3:77580078-77580079|-/T|frameshift_variant;ROBO2|p.K1290Nfs*20|1|0.44|ENSG00000185008|chr3:77634974-77634974|A/-|frameshift_variant;ROBO2|p.P740Tfs*14|1|0.27|ENSG00000185008|chr3:77577498-77577499|-/C|frameshift_variant	26.79610172149135	1.7418937515398478	2				NaN	NaN	0	NaN	8114	3675	11788
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11792	32.185	NaN	1244.9	30	0	156.37	0.035	+			50869	YFARDCHH	8	55	524.723577073679	1047.432601214158	2	524.7247314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YFARDCHH_	ENSG00000101347|ENST00000646673|SAMHD1;nc|ENSG00000101347|Q9Y3Z3-4|SAMHD1	26.79610172149135	0.7524337208463756	2				NaN	NaN	0	NaN	8115	3675	11788
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11827	32.261	NaN	3230.6	30	0	1252.7	0.214	+			43933	TPAPPGPATM	10	46	470.233704284803	938.4528556364061	2	470.2340087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TPAPPGPATM_	ENSG00000147140|ENST00000276079|NONO;nc|ENSG00000147140|Q15233-2|NONO	74.25504064058377	0.24255678544297835	2				NaN	NaN	0	NaN	8144	3681	11826
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11828	32.264	NaN	922.96	30	0	85.999	0.034			+	43930	TPAPAPCPAP	10	44	461.2281188964844	NaN	0	461.2281188964844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TPAPAPCPAP_	REV__ENSG00000169509|ENST00000368790|CRCT1	55.50420428727701	0.270804100254592	2				NaN	NaN	0	NaN	8145	3681	11826
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11846	32.301	NaN	2269.7	30	0	269.34	0.214	+			10961	FEAKVQAL	8	52	453.25859482224706	NaN	0	453.25872802734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FEAKVQAL_	ENSG00000115468|ENST00000264059|EFHD1;nc|ENSG00000115468|Q9BUP0-2|EFHD1	84.9155231211612	1.7418937515398478	2				NaN	NaN	0	NaN	8160	3684	11845
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11847	32.304	NaN	14115	30	0	7263.5	0.037	+			31230	QGYDKIIFK	9	50	371.2093511984184	1110.6062241954553	3	371.2094421386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QGYDKIIFK_	ENSG00000095110|ENST00000534921|NXPE1;nc|ENSG00000095110|Q8N323-2|NXPE1;NXPE1|p.E304Gfs*35|1|0.11|ENSG00000095110|chr11:114523075-114523076|TT/-|frameshift_variant	75.04331003522576	0.118981335847003	2				NaN	NaN	0	NaN	8161	3684	11845
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11882	32.38	NaN	10752	30	0	2282.5	0.214	+			42859	TEGKTFQL	8	67	462.2450639828781	922.4755750325562	2	462.2447509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEGKTFQL_	ENSG00000106105|ENST00000389266|GARS1;nc|ENSG00000106105|P41250-2|GARS1	85.16082228582465	0.29211966821764696	2				NaN	NaN	0	NaN	8190	3690	11881
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11883	32.383	NaN	2533.4	30	0	536.32	0.044			+	-1	KWDQCFCWLRH	11	45	545.9157173921636	1634.7253227766907	3	545.9164428710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_KWDQC(Carbamidomethyl (C))FC(Carbamidomethyl (C))WLRH_	REV__sp|F5HD03|US32_HCMVMProteinUS32OS=Humancytomegalovirus(strainMerlin)OX=295027GN=US32PE=3SV=1;REV__sp|P09708|US32_HCMVAUncharacterizedproteinHHRF7OS=Humancytomegalovirus(strainAD169)OX=10360GN=US32PE=1SV=1	3.61906645146314	0.8634109586117306	2				NaN	NaN	0	NaN	8191	3690	11881
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11901	32.42	NaN	1303.8	30	0	365.6	0.214			+	27196	MEDEKQLS	8	38	490.22279436316035	NaN	0	490.22296142578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MEDEKQLS_	REV__ENSG00000116580|ENST00000368331|GON4L;REV__GON4L|p.E1831Rfs*8|1|0.18|ENSG00000116580|chr1:155756984-155756985|-/T|frameshift_variant;REV__nc|ENSG00000116580|Q3T8J9-3|GON4L	53.351449002276354	1.7418937515398478	2				NaN	NaN	0	NaN	8206	3693	11900
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11902	32.424	NaN	755.73	30	0	208.97	0.106			+	-1	SLLMLVMI	8	32	476.2661437988281	NaN	0	476.2661437988281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Oxidation (M)	_SLLM(Oxidation (M))LVM(Oxidation (M))I_	REV__PHKA2|p.T1148M|1|0.4|ENSG00000044446|chrX:18894298-18894298|G/A|missense_variant	21.70233525837049	1.7418937515398478	2				NaN	NaN	0	NaN	8207	3693	11900
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11903	32.426	NaN	894.93	30	0	337.16	0.106			+	-1	AICPGEDLS	9	28	481.21809353471343	NaN	0	481.21771240234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_AIC(Carbamidomethyl (C))PGEDLS_	REV__ENSG00000111087|ENST00000228682|GLI1;REV__GLI1|p.N1082Tfs*7|1|0.25|ENSG00000111087|chr12:57471978-57471978|C/-|frameshift_variant;REV__GLI1|p.N973Ifs*3|1|0.33|ENSG00000111087|chr12:57471655-57471655|A/-|frameshift_variant;REV__GLI1|p.P536Qfs*77|1|0.26|ENSG00000111087|chr12:57470342-57470342|C/-|frameshift_variant;REV__GLI1|p.P870Lfs*76|1|0.47|ENSG00000111087|chr12:57471345-57471345|C/-|frameshift_variant;REV__nc|ENSG00000111087|P08151-2|GLI1;REV__nc|ENSG00000111087|P08151-3|GLI1	24.20275056022122	0.35506675290109213	2				NaN	NaN	0	NaN	8208	3693	11900
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11904	32.428	NaN	521.95	30	0	109	0.034	+			45411	TVVKLEKT	8	29	459.28668212890625	NaN	0	459.28668212890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TVVKLEKT_	TPM4|p.A211V|1|0.18|ENSG00000167460|chr19:16093721-16093721|C/T|missense_variant	23.04248740728303	1.7418937515398478	2				NaN	NaN	0	NaN	8209	3693	11900
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11956	32.541	NaN	3458.1	30	0	1271.3	0.214				-1	 	0	42	454.2491183103283	453.2418418437283	1	454.2492370605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8252	3702	11955
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11957	32.544	NaN	3851.9	30	0	638.03	0.035			+	27552	MPEGSHVYE	9	62	524.723577073679	1047.432601214158	2	524.7247314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MPEGSHVYE_	REV__ENSG00000169093|ENST00000381317|ASMTL;REV__nc|ENSG00000292339|O95671-2|ASMTL;REV__nc|ENSG00000292339|O95671-3|ASMTL	38.80614096846853	0.43426287593479557	2				NaN	NaN	0	NaN	8253	3702	11955
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11975	32.581	NaN	8609.5	30	0	1891.6	0.214			+	37154	SIVGIGSALL	10	61	465.2869703802677	928.5593878273354	2	465.2872009277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIVGIGSALL_	REV__ENSG00000130748|ENST00000253047|TMEM160	87.75429964447693	0.1439309699732727	2				NaN	NaN	0	NaN	8268	3705	11974
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11976	32.584	NaN	4784.9	30	0	828.69	0.035	+			12585	GEHGLIIRV	9	56	497.29572499579285	992.5768970583857	2	497.29656982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEHGLIIRV_	ENSG00000078618|ENST00000352171|NRDC;nc|ENSG00000078618|O43847-2|NRDC	65.46538089061403	0.16805504838372562	2				NaN	NaN	0	NaN	8269	3705	11974
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11994	32.621	NaN	4384.8	30	0	674.99	0.214	+			11219	FICPCNKL	8	55	469.2345105880961	936.4544682429922	2	469.23492431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FICPCNKL_	nc|ENSG00000132639|P60880-2|SNAP25	62.97842346883844	0.4722955155785405	2				NaN	NaN	0	NaN	8284	3708	11993
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11995	32.625	NaN	1936.2	30	0	755.92	0.106	+			45055	TVGVLLAAK	9	31	436.28441034248266	870.5542677517653	2	436.2840881347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVGVLLAAK_	ENSG00000138674|ENST00000395310|SEC31A;nc|ENSG00000138674|O94979-10|SEC31A;nc|ENSG00000138674|O94979-2|SEC31A;nc|ENSG00000138674|O94979-3|SEC31A;nc|ENSG00000138674|O94979-4|SEC31A;nc|ENSG00000138674|O94979-6|SEC31A;nc|ENSG00000138674|O94979-7|SEC31A;nc|ENSG00000138674|O94979-8|SEC31A;nc|ENSG00000138674|O94979-9|SEC31A;SEC31A|p.P1058Qfs*62|1|0.4|ENSG00000138674|chr4:82827487-82827487|G/-|frameshift_variant	66.42927471994793	0.16001998865088202	2				NaN	NaN	0	NaN	8285	3708	11993
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11996	32.627	NaN	1024.7	30	0	296.64	0.106	+			5155	ATSVLTSGLV	10	31	474.2738842609264	946.5332155886529	2	474.27410888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATSVLTSGLV_	ENSG00000181143|ENST00000397910|MUC16;MUC16|p.F10843Sfs*11|1|0.22|ENSG00000181143|chr19:8938427-8938427|A/-|frameshift_variant;MUC16|p.K6604Rfs*26|1|0.27|ENSG00000181143|chr19:8956959-8956959|T/-|frameshift_variant;MUC16|p.L8270Wfs*63|1|0.04|ENSG00000181143|chr19:8951962-8951963|-/ACCA|frameshift_variant;MUC16|p.N9430Tfs*13|1|0.14|ENSG00000181143|chr19:8948481-8948481|T/-|frameshift_variant;MUC16|p.S4774Ffs*12|1|0.01|ENSG00000181143|chr19:8962451-8962452|-/AC|frameshift_variant;MUC16|p.S6098Wfs*23|1|0.17|ENSG00000181143|chr19:8958477-8958478|-/GGTGACATCTCTTGGCCAACTGACCCTGGACACATCAACC|frameshift_variant;MUC16|p.S6614Lfs*30|1|0.04|ENSG00000181143|chr19:8956931-8956932|-/A|frameshift_variant;MUC16|p.S7713Lfs*5|1|0.45|ENSG00000181143|chr19:8953634-8953634|G/-|frameshift_variant;MUC16|p.T7968Nfs*2|1|0.41|ENSG00000181143|chr19:8952867-8952868|-/T|frameshift_variant;MUC16|p.T8791Qfs*38|1|0.31|ENSG00000181143|chr19:8950403-8950403|G/-|frameshift_variant	37.15910966729921	0.575322462179216	2				NaN	NaN	0	NaN	8286	3708	11993
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11997	32.628	NaN	2654.3	30	0	1484	0.037				-1	VTMIIAVCIL	10	29	364.54506940527307	NaN	0	364.54510498046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_VTM(Oxidation (M))IIAVCIL_	ENST00000523831.1_1_8:101513253-101513298:+|nuORF	22.579656572578934	0.4201028297492154	2				NaN	NaN	0	NaN	8287	3708	11993
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12015	32.666	NaN	5347.7	30	0	545.59	0.214	+			11483	FPAAPAPKM	9	60	465.24953719412036	928.4845214550407	2	465.7508239746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FPAAPAPKM_	ENSG00000163694|ENST00000295971|RBM47;ENST00000510871.5_1_4:40427923-40438677:-|nuORF;nc|ENSG00000163694|A0AV96-2|RBM47	76.84663266511073	0.11118375776443899	2				NaN	NaN	0	NaN	8302	3711	12014
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12016	32.669	NaN	5307.4	30	0	816.89	0.034			+	23968	LDTMSNLQ	8	51	469.2170750267552	NaN	0	469.2167053222656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LDTM(Oxidation (M))SNLQ_	REV__ENST00000423385.1_1:142804566-142805260:-|nuORF;REV__ENST00000428930.1_1:143231394-143232089:+|nuORF	90.77665401227738	1.7418937515398478	2				NaN	NaN	0	NaN	8303	3711	12014
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12035	32.707	NaN	5285.7	30	0	1931.5	0.214	+			18276	IPIKNVEM	8	60	472.2675698598195	942.520586786439	2	472.26824951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IPIKNVEM_	ENSG00000089472|ENST00000343002|HEPH;nc|ENSG00000089472|Q9BQS7-2|HEPH;nc|ENSG00000089472|Q9BQS7-3|HEPH;nc|ENSG00000089472|Q9BQS7-4|HEPH	76.7741389293348	0.3504530765139327	2				NaN	NaN	0	NaN	8319	3714	12034
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12036	32.711	NaN	2218.8	30	0	989.63	0.036	+			8919	EEVKSFRVL	9	51	553.8149677528115	NaN	0	553.815185546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EEVKSFRVL_	ENSG00000139163|ENST00000266517|ETNK1;nc|ENSG00000139163|Q9HBU6-2|ETNK1;nc|ENSG00000139163|Q9HBU6|ETNK1	64.20726635412375	0.13137488984569443	2				NaN	NaN	0	NaN	8320	3714	12034
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12087	32.825	NaN	2566.9	30	0	655.06	0.14	+			17367	IALVGKAM	8	51	401.7465490252971	NaN	0	401.7465515136719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IALVGKAM_	ENSG00000163527|ENST00000295770|STT3B;STT3B|p.E758Nfs*18|1|0.05|ENSG00000163527|chr3:31633017-31633018|-/AAACATTC|frameshift_variant	83.28718786952967	1.7418937515398478	2				NaN	NaN	0	NaN	8362	3723	12086
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12105	32.864	NaN	10462	30	0	2649.9	0.143	+			31841	QPSTIATSM	9	57	468.2285902134212	934.4426274936425	2	468.22900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QPSTIATSM_	ENSG00000242372|ENST00000374450|EIF6;nc|ENSG00000242372|P56537-2|EIF6	125.81401957644128	0.01768009863045738	2				NaN	NaN	0	NaN	8377	3726	12104
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12156	32.979	NaN	1436.3	30	0	410.15	0.214	+			9555	ELETLRFG	8	34	482.7583645335686	NaN	0	482.7586669921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ELETLRFG_	ENSG00000088876|ENST00000278772|ZNF343;nc|ENSG00000088876|Q6P1L6-2|ZNF343	38.80614096846853	1.7418937515398478	2				NaN	NaN	0	NaN	8419	3735	12155
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12157	32.982	NaN	201.11	30	0	23.508	0.106	+			9111	EGKTTDYY	8	19	488.7158508300781	NaN	0	488.7158508300781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EGKTTDYY_	tr|U7T4Z9|U7T4Z9_FUSNUPhophatidylinositol-4-phosphate5-kinaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00618PE=4SV=1	20.481830146152948	1.741893751539848	2				NaN	NaN	0	NaN	8420	3735	12155
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12158	32.984	NaN	1151	30	0	334.17	0.034	+			29466	PCPSSLNSL	9	42	459.2234913982367	NaN	0	459.22369384765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PCPSSLNSL_	ENST00000597611.7_3_19:18654757-18654817:-|nuORF	60.97194046774394	0.14517358171632622	2				NaN	NaN	0	NaN	8421	3735	12155
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12175	33.018	NaN	4463.6	30	0	2237.5	0.143	+			32269	QTLSGAGLLK	10	52	494.2953869433867	986.5762209535734	2	494.2958068847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QTLSGAGLLK_	ENSG00000028528|ENST00000559844|SNX1;ENST00000560260.5_1_15:64422114-64427054:+|nuORF;nc|ENSG00000028528|Q13596-2|SNX1;nc|ENSG00000028528|Q13596-3|SNX1	91.26522074875469	0.12383023862516404	2				NaN	NaN	0	NaN	8435	3738	12174
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12203	33.083	NaN	47679	30	0	12697	0.142	+			44829	TTSVITIVK	9	69	481.299681922328	960.584810911456	2	481.2996520996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTSVITIVK_	ENSG00000198517|ENST00000343242|MAFK	167.22876102047192	0.0032399547248545047	2				NaN	NaN	0	NaN	8457	3744	12202
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12219	33.118	NaN	1792.3	30	0	848.95	0.142	+			25116	LLPYIVNI	8	38	472.7955627441406	NaN	0	472.7955627441406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LLPYIVNI_	ENSG00000084092|ENST00000264230|NOA1	14.664097394203935	1.7418937515398478	2				NaN	NaN	0	NaN	8470	3747	12218
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12231	33.145	NaN	2627.2	30	0	451.9	0.214	+			28436	NEVMVHVV	8	54	463.7416337875268	925.4687146418536	2	463.7414245605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NEVMVHVV_	ENSG00000150093|ENST00000302278|ITGB1;nc|ENSG00000150093|P05556-2|ITGB1;nc|ENSG00000150093|P05556-3|ITGB1;nc|ENSG00000150093|P05556-4|ITGB1;nc|ENSG00000150093|P05556-5|ITGB1	128.81572412613596	0.2219515639268018	2				NaN	NaN	0	NaN	8479	3750	12230
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12232	33.148	NaN	1761.7	30	0	297.82	0.034	+			39540	STFSSLVAK	9	39	470.26079721670186	938.5070415002037	2	470.26068115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STFSSLVAK_	ENST00000529306.5_1_11:502127-506619:-|nuORF	39.252832667884924	0.4290233611298554	2				NaN	NaN	0	NaN	8480	3750	12230
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12248	33.181	NaN	1210	30	0	120.99	0.143	+			38654	SSIKDLVLK	9	43	501.81329057080893	NaN	0	501.81298828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSIKDLVLK_	ENSG00000014123|ENST00000369278|UFL1;nc|ENSG00000014123|O94874-2|UFL1	61.691277971877994	0.14210560126578747	2				NaN	NaN	0	NaN	8493	3753	12247
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12283	33.258	NaN	12699	30	0	2863.9	0.214	+			48467	VTLQQLHCLK	10	51	394.89369521263126	1181.6592562380938	3	394.8941345214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTLQQLHCLK_	ENST00000310613.7_1_4:70626187-70626241:-|nuORF	45.02220120713402	0.5028680121232791	2				NaN	NaN	0	NaN	8522	3759	12282
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12284	33.262	NaN	1998.5	30	0	359.48	0.034	+			15957	HAGSLLLKM	9	56	485.28117194900693	968.5477909648139	2	485.28118896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HAGSLLLKM_	ENSG00000153165|ENST00000409886|RGPD3;ENSG00000153201|ENST00000283195|RANBP2;ENSG00000185304|ENST00000398146|RGPD2;ENSG00000187627|ENST00000641458|RGPD1;ENSG00000196862|ENST00000408999|RGPD4;nc|ENSG00000187627|P0DJD0|RGPD1;RANBP2|p.A864Lfs*3|1|0.3|ENSG00000153201|chr2:108758533-108758533|G/-|frameshift_variant;RANBP2|p.C2737Vfs*35|1|0.18|ENSG00000153201|chr2:108772957-108772957|T/-|frameshift_variant;RANBP2|p.F3068Lfs*10|1|0.06|ENSG00000153201|chr2:108782692-108782692|T/-|frameshift_variant;RANBP2|p.H3114Sfs*18|1|0.33|ENSG00000153201|chr2:108782827-108782828|-/T|frameshift_variant;RANBP2|p.K1989Nfs*9|1|0.05|ENSG00000153201|chr2:108766505-108766506|-/TATCCTG|frameshift_variant;RANBP2|p.K2576Nfs*63|2|0.22|ENSG00000153201|chr2:108768262-108768262|A/-|frameshift_variant;RANBP2|p.S1486Rfs*51|1|0.05|ENSG00000153201|chr2:108764996-108764997|-/ATTTTGTATTC|frameshift_variant;RGPD2|p.F1350Lfs*25|1|0.25|ENSG00000185304|chr2:87782974-87782974|A/-|frameshift_variant;RGPD3|p.V1441*|1|0.45|ENSG00000153165|chr2:106423647-106423647|T/-|frameshift_variant;RGPD4|p.K568Nfs*33|1|0.14|ENSG00000196862|chr2:107859787-107859787|A/-|frameshift_variant	82.24051045832904	0.08786059719216216	2				NaN	NaN	0	NaN	8523	3759	12282
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12319	33.338	NaN	1792.4	30	0	509.47	0.214	+			24237	LESTVDKKC	9	40	511.7640643920373	NaN	0	511.7635192871094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LESTVDKKC_	RTN4|p.K419T|1|0.26|ENSG00000115310|chr2:55026843-55026843|T/G|missense_variant	38.80614096846853	0.28164298475537564	2				NaN	NaN	0	NaN	8552	3765	12318
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12320	33.341	NaN	1142.2	30	0	522.96	0.033	+			9444	EKLGGSAII	9	28	444.2636548255192	NaN	0	444.2634582519531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EKLGGSAII_	CFL1|p.V158I|1|0.12|ENSG00000172757|chr11:65855365-65855365|C/T|missense_variant;ENST00000508046.1_1_5:68609200-68609404:-|nuORF	35.61828744233558	0.29773779453147337	2				NaN	NaN	0	NaN	8553	3765	12318
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12338	33.378	NaN	3707.2	30	0	664.92	0.142	+			27106	MANGAVIHL	9	57	471.24705786557746	940.4795627979549	2	471.24713134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))ANGAVIHL_	ENSG00000099995|ENST00000215793|SF3A1;nc|ENSG00000099995|Q15459-2|SF3A1	138.4795579985376	0.011193365975340062	2				NaN	NaN	0	NaN	8568	3768	12337
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12372	33.453	NaN	41549	30	0	13569	0.214	+			4924	ATQMVRMILK	10	61	397.5626087702231	1189.6659969108694	3	397.56329345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATQMVRMILK_	ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5	102.0615471778698	0.07157459376830236	2				NaN	NaN	0	NaN	8596	3774	12371
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12373	33.457	NaN	17246	30	0	4363.3	0.106	+			36730	SGVSLAALK	9	57	423.2579063753874	844.5012598175748	2	423.2583923339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SGVSLAALK_	ENSG00000124575|ENST00000244534|H1-3;ENSG00000168298|ENST00000304218|H1-4;ENSG00000187837|ENST00000343677|H1-2	145.15565482312357	0.00806134135205793	2				NaN	NaN	0	NaN	8597	3774	12371
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12374	33.459	NaN	2088	30	0	649.98	0.034	+			9222	EGSLIKLTA	9	34	466.27642376446704	930.5382945957341	2	466.2767639160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EGSLIKLTA_	ENSG00000166831|ENST00000300069|RBPMS2	39.252832667884924	0.4290233611298554	2				NaN	NaN	0	NaN	8598	3774	12371
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12392	33.496	NaN	13362	30	0	4357.7	0.142	+			28511	NIAEALVSK	9	65	472.77355788064085	943.5325628280817	2	472.7736511230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NIAEALVSK_	ENSG00000197157|ENST00000354725|SND1;GAS2L3-SND1|1|fusion;SND1|p.A514Qfs*156|1|0.37|ENSG00000197157|chr7:127929195-127929195|A/-|frameshift_variant	57.148748479083515	0.2373828479495039	2				NaN	NaN	0	NaN	8613	3777	12391
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12410	33.535	NaN	79293	30	0	39436	0.214	+			32433	QVIGVVLQK	9	84	492.3159307267247	982.6173085202494	2	492.3156433105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QVIGVVLQK_	ENST00000297857.3_1_8:124268339-124279533:-|nuORF	181.80572006810442	0.001114768557639603	2				NaN	NaN	0	NaN	8628	3780	12409
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12411	33.539	NaN	12433	30	0	4004.4	0.106	+			37359	SLFGSPVAK	9	46	453.25785436901	904.50115580482	2	453.2579345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLFGSPVAK_	ENSG00000186260|ENST00000571589|MRTFB;nc|ENSG00000186260|Q9ULH7-4|MRTFB;nc|ENSG00000186260|Q9ULH7|MRTFB	80.45461616416974	0.09558281504443908	2				NaN	NaN	0	NaN	8629	3780	12409
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12412	33.541	NaN	807.55	30	0	114.23	0.035				-1	CASATSLQY	9	36	500.7236916735308	NaN	0	500.7234191894531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_C(Carbamidomethyl (C))ASATSLQY_	ENSG00000162032|ENST00000566339|SPSB3;ENST00000564709.5_1_16:1827100-1828401:-|nuORF;ENST00000569380.5_1_16:1827100-1828231:-|nuORF	79.45101966838831	0.07326487554222888	2				NaN	NaN	0	NaN	8630	3780	12409
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12430	33.578	NaN	6349.7	30	0	747.24	0.214			+	21122	KKSFSIKK	8	62	483.3107582358896	964.6069635385792	2	483.310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KKSFSIKK_	REV__ENSG00000163629|ENST00000411767|PTPN13;REV__nc|ENSG00000163629|Q12923-2|PTPN13;REV__nc|ENSG00000163629|Q12923-3|PTPN13;REV__nc|ENSG00000163629|Q12923-4|PTPN13;REV__PTPN13|p.K1535Sfs*16|1|0.38|ENSG00000163629|chr4:86769879-86769879|A/-|frameshift_variant;REV__PTPN13|p.N1374Mfs*7|1|0.15|ENSG00000163629|chr4:86764692-86764692|A/-|frameshift_variant;REV__PTPN13|p.T2330Qfs*13|1|0.12|ENSG00000163629|chr4:86807799-86807799|A/-|frameshift_variant	67.49366992349736	0.4277823096851425	2				NaN	NaN	0	NaN	8645	3783	12429
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12431	33.582	NaN	1533.9	30	0	644.3	0.037				-1	MPVRHSRNL	9	25	375.8684997558594	NaN	0	375.8684997558594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_M(Oxidation (M))PVRHSRNL_	BRCA1|p.K739Ifs*15|1|0.31|ENSG00000012048|chr17:43093315-43093316|-/TA|frameshift_variant;ENSG00000012048|ENST00000357654|BRCA1;nc|ENSG00000012048|P38398-4|BRCA1;nc|ENSG00000012048|P38398-7|BRCA1;nc|ENSG00000012048|P38398-8|BRCA1	27.882242232435846	0.3367954786602879	2				NaN	NaN	0	NaN	8646	3783	12429
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12449	33.618	NaN	6777	30	0	2587.2	0.214			+	28698	NNDLTLLVS	9	64	494.768748179246	987.522943425292	2	494.7698669433594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NNDLTLLVS_	REV__ENSG00000137801|ENST00000260356|THBS1;REV__nc|ENSG00000137801|P07996-2|THBS1	68.78682469695295	0.14603441672067394	2				NaN	NaN	0	NaN	8661	3786	12448
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12450	33.622	NaN	2018.6	30	0	1374.1	0.037				-1	VTMIIAVCIL	10	17	364.54508151917645	NaN	0	364.544921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_VTM(Oxidation (M))IIAVCIL_	ENST00000523831.1_1_8:101513253-101513298:+|nuORF	21.68575002086885	0.4201028297492154	2				NaN	NaN	0	NaN	8662	3786	12448
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12502	33.735	NaN	5849.2	30	0	2474.1	0.214	+			44979	TVCLTLTAK	9	42	475.27254240175137	948.5305318703028	2	475.2727966308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVCLTLTAK_	ATP1A3|p.I582Tfs*73|1|0.04|ENSG00000105409|chr19:41978212-41978212|A/-|frameshift_variant;ATP1A4|p.E557Nfs*4|1|0.1|ENSG00000132681|chr1:160171424-160171424|G/-|frameshift_variant;ATP1A4|p.P701Lfs*20|1|0.3|ENSG00000132681|chr1:160174218-160174218|C/-|frameshift_variant;ENSG00000018625|ENST00000361216|ATP1A2;ENSG00000105409|ENST00000648268|ATP1A3;ENSG00000132681|ENST00000368081|ATP1A4;ENSG00000163399|ENST00000295598|ATP1A1;ENST00000472488.5_1_1:160085570-160106822:+|nuORF;nc|ENSG00000105409|P13637-2|ATP1A3;nc|ENSG00000105409|P13637-3|ATP1A3;nc|ENSG00000163399|P05023-2|ATP1A1;nc|ENSG00000163399|P05023-3|ATP1A1;nc|ENSG00000163399|P05023-4|ATP1A1	58.22992032128504	0.22837015374068087	2				NaN	NaN	0	NaN	8705	3795	12501
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12503	33.738	NaN	2589.4	30	0	460.21	0.106	+			23954	LDSIFGPVL	9	46	480.77159038783776	959.5286278424755	2	480.77191162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LDSIFGPVL_	ENSG00000118473|ENST00000371037|SGIP1;nc|ENSG00000118473|Q9BQI5-2|SGIP1;nc|ENSG00000118473|Q9BQI5-3|SGIP1;SGIP1|p.G427Dfs*71|1|0.38|ENSG00000118473|chr1:66682328-66682328|C/-|frameshift_variant;SGIP1|p.N627Tfs*21|1|0.07|ENSG00000118473|chr1:66729399-66729399|A/-|frameshift_variant	50.0245360154114	0.3026755932229825	2				NaN	NaN	0	NaN	8706	3795	12501
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12504	33.74	NaN	2011.8	30	0	1095	0.106	+			31754	QPESVVNTM	9	35	502.7395086633069	1003.4644643934138	2	502.7395324707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QPESVVNTM_	ENSG00000198380|ENST00000357308|GFPT1;nc|ENSG00000198380|Q06210-2|GFPT1	65.46538089061403	0.16805504838372562	2				NaN	NaN	0	NaN	8707	3795	12501
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12505	33.742	NaN	417.67	30	0	171.12	0.033			+	18881	IVGVNRTN	8	19	436.7495422363281	NaN	0	436.7495422363281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IVGVNRTN_	REV__tr|U7T480|U7T480_FUSNUhistidinekinaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00375PE=4SV=1	13.775330524044264	1.7418937515398478	2				NaN	NaN	0	NaN	8708	3795	12501
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12524	33.778	NaN	2756.9	30	0	1320	0.214				-1	QSCYIIISK	9	43	556.294233028631	1110.5739131240618	2	556.2942504882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_QSC(Carbamidomethyl (C))YIIISK_	ENSG00000158987|ENST00000509018|RAPGEF6;nc|ENSG00000158987|Q8TEU7-2|RAPGEF6;nc|ENSG00000158987|Q8TEU7-3|RAPGEF6;nc|ENSG00000158987|Q8TEU7-4|RAPGEF6;nc|ENSG00000158987|Q8TEU7-5|RAPGEF6;nc|ENSG00000158987|Q8TEU7-6|RAPGEF6;RAPGEF6|p.L1388*|1|0.25|ENSG00000158987|chr5:131431161-131431161|A/-|frameshift_variant;RAPGEF6|p.N832Ifs*17|2|0.4|ENSG00000158987|chr5:131462074-131462074|T/-|frameshift_variant	38.753607047826485	0.4348790777924195	2				NaN	NaN	0	NaN	8724	3798	12523
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12525	33.781	NaN	1125.9	30	0	291.63	0.106	+			35488	SATLLCWK	8	32	461.2467041015625	NaN	0	461.2467041015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SATLLCWK_	ENST00000457861.1_1_7:935511-935808:+|nuORF	31.954861631926434	1.7418937515398478	2				NaN	NaN	0	NaN	8725	3798	12523
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12526	33.783	NaN	5431.1	30	0	3775.2	0.106	+			24878	LKGTKGVVAI	10	23	329.2178907669441	984.6318429010323	3	329.2183532714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LKGTKGVVAI_	tr|U7T1Q1|U7T1Q1_FUSNUAutotransporterdomain-containingprotein(Fragment)OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00530PE=4SV=1	21.9598887501803	0.7004979571547932	2				NaN	NaN	0	NaN	8726	3798	12523
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12527	33.785	NaN	1275.2	30	0	314.89	0.033	+			28826	NPNAAAQVL	9	32	449.2428448641674	896.4711367951348	2	449.24322509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NPNAAAQVL_	ENSG00000134827|ENST00000257264|TCN1	68.78682469695295	0.14603441672067394	2				NaN	NaN	0	NaN	8727	3798	12523
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12537	33.805	NaN	7312.6	30	0	2402.8	0.142	+			41739	SVSIPSITK	9	47	466.27642376446704	930.5382945957341	2	466.2768859863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSIPSITK_	ENSG00000143776|ENST00000366766|CDC42BPA;nc|ENSG00000143776|Q5VT25-3|CDC42BPA;nc|ENSG00000143776|Q5VT25-4|CDC42BPA;nc|ENSG00000143776|Q5VT25-5|CDC42BPA;nc|ENSG00000143776|Q5VT25-6|CDC42BPA;nc|ENSG00000143776|Q5VT25|CDC42BPA	49.536043120802724	0.308405419312776	2				NaN	NaN	0	NaN	8734	3801	12536
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12571	33.879	NaN	4126.4	30	0	1893	0.214	+			32434	QVIGVVLQK	9	54	492.3159307267247	982.6173085202494	2	492.3163146972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QVIGVVLQK_	ENST00000297857.3_1_8:124268339-124279533:-|nuORF	79.45101966838831	0.09992237243120712	2				NaN	NaN	0	NaN	8762	3807	12570
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12572	33.883	NaN	2825.8	30	0	377.94	0.033	+			28278	NEAKLVAL	8	48	429.25806828826967	856.5015836433394	2	429.2583923339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NEAKLVAL_	ENSG00000165219|ENST00000297933|GAPVD1;nc|ENSG00000165219|Q14C86-3|GAPVD1;nc|ENSG00000165219|Q14C86-4|GAPVD1;nc|ENSG00000165219|Q14C86-5|GAPVD1;nc|ENSG00000165219|Q14C86-6|GAPVD1;nc|ENSG00000165219|Q14C86|GAPVD1	119.55681237560556	0.2351890295295504	2				NaN	NaN	0	NaN	8763	3807	12570
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12590	33.919	NaN	20257	30	0	5943.9	0.142	+			263	AAMPGFIAK	9	64	453.24884635877976	904.4831397843595	2	453.2495422363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAMPGFIAK_	ENSG00000122008|ENST00000241436|POLK;ENST00000506928.5_1_5:74842847-74879138:+|nuORF;ENST00000508867.5_1_5:74842847-74877278:+|nuORF;nc|ENSG00000122008|Q9UBT6-2|POLK;nc|ENSG00000122008|Q9UBT6-3|POLK;nc|ENSG00000122008|Q9UBT6-4|POLK;nc|ENSG00000122008|Q9UBT6-5|POLK;nc|ENSG00000122008|Q9UBT6-6|POLK;nc|ENSG00000122008|Q9UBT6-7|POLK;nc|ENSG00000122008|Q9UBT6-8|POLK;POLK|p.K571Nfs*18|1|0.29|ENSG00000122008|chr5:75596401-75596401|A/-|frameshift_variant	106.41520541750704	0.03265588207292361	2				NaN	NaN	0	NaN	8778	3810	12589
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12608	33.957	NaN	808.75	30	0	179.39	0.214	+			49274	VVQDWKFV	8	37	510.78056461471	1019.54657629622	2	510.7812805175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVQDWKFV_	ENSG00000147432|ENST00000289957|CHRNB3	37.15910966729921	0.6739408393984688	2				NaN	NaN	0	NaN	8793	3813	12607
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12609	33.961	NaN	2104.8	30	0	535.3	0.035			+	-1	LICLTANAL	9	53	494.77766755955014	987.5407821859003	2	495.279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LIC(Carbamidomethyl (C))LTANAL_	REV__ENSG00000168827|ENST00000486715|GFM1;REV__ENST00000477721.1_1_3:158399847-158408148:+|nuORF;REV__GFM1|p.P648S|1|0.35|ENSG00000168827|chr3:158690195-158690195|C/T|missense_variant;REV__nc|ENSG00000168827|Q96RP9-2|GFM1	47.657333605630114	0.33044192980041115	2				NaN	NaN	0	NaN	8794	3813	12607
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12674	34.104	NaN	9729.6	30	0	2867.1	0.144	+			32466	QVLSAATIVAK	11	70	550.8382466063014	NaN	0	550.8380126953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QVLSAATIVAK_	ENSG00000137076|ENST00000314888|TLN1;ENSG00000171914|ENST00000636159|TLN2;nc|ENSG00000137076|Q9Y490-2|TLN1;TLN1|p.P1628Rfs*20|1|0.44|ENSG00000137076|chr9:35707144-35707144|G/-|frameshift_variant	117.5257442709337	0.0018453473740108236	2				NaN	NaN	0	NaN	8847	3825	12673
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12692	34.142	NaN	1571.6	30	0	276.47	0.144				-1	FSGCMTQLF	9	51	525.2264767934607	NaN	0	525.2265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_FSGCM(Oxidation (M))TQLF_	ENSG00000176540|ENST00000319813|OR4C5	62.107414245175825	0.1403307765918332	2				NaN	NaN	0	NaN	8862	3828	12691
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12710	34.18	NaN	2917.7	30	0	678.76	0.143			+	30079	PQNQELTY	8	34	496.7378256905343	991.4610984478686	2	496.73870849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PQNQELTY_	REV__ENST00000261609.11_1_15:28538126-28544646:-|nuORF	60.97194046774394	0.49215940876911696	2				NaN	NaN	0	NaN	8877	3831	12709
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12745	34.256	NaN	1022.2	30	0	131.58	0.144	+			16356	HEMEKAFAF	9	44	555.2575936690171	1108.500634404834	2	555.2587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HEMEKAFAF_	ENSG00000075975|ENST00000170447|MKRN2;nc|ENSG00000075975|Q9H000-2|MKRN2	44.377184641726394	0.36891676396732553	2				NaN	NaN	0	NaN	8906	3837	12744
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12763	34.294	NaN	4567.3	30	0	502.45	0.143			+	21546	KNTKLALNF	9	63	524.8107609795921	1047.6069690259842	2	525.312744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KNTKLALNF_	REV__tr|U7SPW0|U7SPW0_FUSNUMarRfamilytranscriptionalregulatorOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01640PE=4SV=1	77.31757898189308	0.1091473830098891	2				NaN	NaN	0	NaN	8921	3840	12762
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12798	34.371	NaN	8490.8	30	0	6222.4	0.14			+	16951	HPPATAAH	8	33	401.20441455654003	800.3942761798801	2	401.20465087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HPPATAAH_	REV__CENPC|p.T575Lfs*21|1|0.35|ENSG00000145241|chr4:67508995-67508995|T/-|frameshift_variant;REV__ENSG00000145241|ENST00000273853|CENPC;REV__ENST00000510189.5_1_4:68359569-68411187:-|nuORF;REV__nc|ENSG00000145241|Q03188-2|CENPC	15.63621529709179	0.7929342111279789	2				NaN	NaN	0	NaN	8950	3846	12797
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12816	34.41	NaN	4544.6	30	0	843.11	0.214	+			17578	IEASKLPK	8	55	443.2740079210016	884.5334629088032	2	443.27374267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IEASKLPK_	ENSG00000196455|ENST00000356763|PIK3R4	104.74654710444128	0.24806011021879068	2				NaN	NaN	0	NaN	8965	3849	12815
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12817	34.414	NaN	7381.8	30	0	2583.2	0.106	+			32279	QTMDMIISK	9	60	533.767337654542	1065.5201223758838	2	533.7681884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QTMDMIISK_	ENSG00000117262|ENST00000313835|GPR89A;ENSG00000188092|ENST00000314163|GPR89B;ENST00000460277.5_1_1:145765021-145811987:-|nuORF;ENST00000478307.5_1_1:147400580-147440603:+|nuORF;nc|ENSG00000188092|B7ZAQ6-2|GPR89A;nc|ENSG00000188092|B7ZAQ6-3|GPR89A	54.722347961057174	0.257609425301511	2				NaN	NaN	0	NaN	8966	3849	12815
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12818	34.416	NaN	1570.6	30	0	253.24	0.036	+			9835	EPMDIRSAY	9	38	541.2531423391289	NaN	0	541.2527465820312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EPMDIRSAY_	ENSG00000120549|ENST00000376454|KIAA1217;KIAA1217|p.N1661Tfs*23|1|0.07|ENSG00000120549|chr10:24544247-24544247|A/-|frameshift_variant;nc|ENSG00000120549|Q5T5P2-3|KIAA1217	34.172542307311794	0.30503706118289736	2				NaN	NaN	0	NaN	8967	3849	12815
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12853	34.491	NaN	5568.6	30	0	1296	0.214	+			8172	EAANTMVNY	9	58	506.7236336654453	1011.4327143976906	2	506.7239990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EAANTMVNY_	ENSG00000011304|ENST00000356948|PTBP1;ENST00000586944.5_1_19:797434-805231:+|nuORF;nc|ENSG00000011304|P26599-1|PTBP1;nc|ENSG00000011304|P26599-2|PTBP1	118.74307786436346	0.02196067127630568	2				NaN	NaN	0	NaN	8996	3855	12852
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12854	34.495	NaN	1596.3	30	0	392.52	0.034			+	29988	PPFTIPAY	8	35	453.2402863883262	NaN	0	453.2400207519531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PPFTIPAY_	REV__ENSG00000167721|ENST00000301364|TSR1	37.028477286268924	1.7418937515398478	2				NaN	NaN	0	NaN	8997	3855	12852
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12872	34.531	NaN	8753.3	30	0	2909.2	0.215	+			15949	HAGLVYEY	8	55	476.2318535643997	950.4491541955995	2	476.23248291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HAGLVYEY_	ENSG00000132141|ENST00000314144|CCT6B;ENSG00000146731|ENST00000275603|CCT6A;ENST00000492618.5_1_7:56127237-56129562:+|nuORF;ENST00000577307.1_1_17:33266566-33269658:-|nuORF;nc|ENSG00000132141|Q92526-2|CCT6B;nc|ENSG00000132141|Q92526-3|CCT6B;nc|ENSG00000146731|P40227-2|CCT6A	54.76467175910256	0.5536104764165384	2				NaN	NaN	0	NaN	9012	3858	12871
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12873	34.535	NaN	8200.9	30	0	6501.7	0.03				-1	 	0	14	321.6876525878906	NaN	0	321.6876525878906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9013	3858	12871
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12908	34.61	NaN	10915	30	0	2911	0.214	+			41840	SVSTPLIIK	9	57	479.3021990567155	956.589845180231	2	479.3028869628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSTPLIIK_	ENSG00000029639|ENST00000367166|TFB1M	107.00750918261382	0.032051501805654005	2				NaN	NaN	0	NaN	9042	3864	12907
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12909	34.614	NaN	1633.9	30	0	304.41	0.034	+			37510	SLLGPRVIG	9	39	456.28706515743175	910.5595773816635	2	456.28765869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLLGPRVIG_	ENSG00000177989|ENST00000329363|ODF3B;ENST00000405135.5_1_22:50968911-50969740:-|nuORF;ENST00000463472.1_1_22:50969089-50969740:-|nuORF;ENST00000468249.1_1_22:50968911-50969740:-|nuORF;ENST00000469660.1_1_22:50969089-50970101:-|nuORF	45.9519527083369	0.35044536499095585	2				NaN	NaN	0	NaN	9043	3864	12907
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12927	34.651	NaN	6805.8	30	0	2451.6	0.142	+			18884	IVIETGPLK	9	61	485.3022777090136	968.5900024848272	2	485.3028564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IVIETGPLK_	ENSG00000151657|ENST00000379562|KIN	139.97047562133406	0.010493916756945389	2				NaN	NaN	0	NaN	9058	3867	12926
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12945	34.69	NaN	1712.4	30	0	565.02	0.143	+			49384	VVTDAFLAVA	10	35	503.2853640148027	NaN	0	503.2857360839844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVTDAFLAVA_	ENSG00000176720|ENST00000318407|BOK;nc|ENSG00000176720|Q9UMX3-2|BOK	53.351449002276354	0.2844141321977336	2				NaN	NaN	0	NaN	9073	3870	12944
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12963	34.728	NaN	16454	30	0	2570	0.214				-1	 	0	71	473.2747577336117	944.5349625340234	2	473.2751770019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9088	3873	12962
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12964	34.732	NaN	1682	30	0	266.32	0.106	+			30654	QAVADAVTY	9	40	469.234523358162	NaN	0	469.2345886230469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QAVADAVTY_	ENSG00000142507|ENST00000270586|PSMB6	84.9155231211612	0.05454024040755679	2				NaN	NaN	0	NaN	9089	3873	12962
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12965	34.734	NaN	582.15	30	0	53.653	0.036	+			7831	DPVVADYKY	9	36	535.2632422207762	1068.5119315083523	2	535.26513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DPVVADYKY_	ENSG00000132170|ENST00000651735|PPARG;ENST00000477039.5_1_3:12393091-12447643:+|nuORF;nc|ENSG00000132170|P37231-2|PPARG;nc|ENSG00000132170|P37231-3|PPARG;nc|ENSG00000132170|P37231|PPARG;PPARG|p.L298Cfs*38|1|0.26|ENSG00000132170|chr3:12416771-12416771|C/-|frameshift_variant;PPARG|p.S186Vfs*47|1|0.08|ENSG00000132170|chr3:12392683-12392683|A/-|frameshift_variant	61.76455937419982	0.19890525308472518	2				NaN	NaN	0	NaN	9090	3873	12962
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12983	34.771	NaN	1603	30	0	203.08	0.142	+			2497	APSVVKISY	9	57	482.2787692749935	962.5429856167871	2	482.27886962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_APSVVKISY_	ENSG00000080503|ENST00000349721|SMARCA2;nc|ENSG00000080503|P51531-2|SMARCA2	93.1432384553994	0.056003526918089595	2				NaN	NaN	0	NaN	9105	3876	12982
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13001	34.81	NaN	4365.4	30	0	1230.6	0.141			+	25948	LSIALNEL	8	51	436.7577954754383	871.5010380176766	2	436.7579040527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSIALNEL_	REV__ENSG00000118965|ENST00000281405|WDR35;REV__ENST00000445063.5_1_2:20113365-20153734:-|nuORF;REV__nc|ENSG00000118965|Q9P2L0|WDR35	98.62937762414208	0.25143494708580966	2				NaN	NaN	0	NaN	9120	3879	13000
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13048	34.913	NaN	5185	30	0	1497.1	0.214	+			42937	TEIPVRAL	8	48	449.7713114983359	897.5280700634718	2	449.77154541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEIPVRAL_	ENSG00000133067|ENST00000367278|LGR6;ENST00000308543.3_1_1:202245458-202272411:+|nuORF;ENST00000506931.1_1_1:202245458-202249981:+|nuORF;nc|ENSG00000133067|Q9HBX8-2|LGR6	66.42927471994793	0.4381325844043345	2				NaN	NaN	0	NaN	9158	3888	13047
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13049	34.917	NaN	6483.4	30	0	4927.1	0.032			+	14038	GSGPRAAW	8	31	401.2041308832381	800.3937088332763	2	401.2041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSGPRAAW_	REV__ENST00000368811.7_1_1:151966316-151966505:-|nuORF	20.481830146152948	0.8005983782650069	2				NaN	NaN	0	NaN	9159	3888	13047
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13067	34.953	NaN	38211	30	0	13725	0.139				-1	 	0	45	379.2092302351763	756.4039075371526	2	379.20953369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9174	3891	13066
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13085	34.991	NaN	3187.4	30	0	612.95	0.214	+			25389	LPIEAPIRM	9	56	528.2987343317126	1054.582915730225	2	528.3001098632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LPIEAPIRM(Oxidation (M))_	ENSG00000198712|ENST00000361739|MT-CO2	98.62937762414208	0.04060045538121712	2				NaN	NaN	0	NaN	9189	3894	13084
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13086	34.995	NaN	1091.5	30	0	170.96	0.034				-1	QQCTQMDKIRH	11	41	482.23193359375	NaN	0	482.23193359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_QQC(Carbamidomethyl (C))TQMDKIRH_	ENSG00000178177|ENST00000635767|LCORL	28.5767321226876	0.4380616241468488	2				NaN	NaN	0	NaN	9190	3894	13084
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13104	35.032	NaN	1982	30	0	920.98	0.14			+	11890	FTPNPAGL	8	32	408.7158420546681	NaN	0	408.7154846191406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FTPNPAGL_	REV__ENSG00000011478|ENST00000012049|QPCTL;REV__nc|ENSG00000011478|Q9NXS2-3|QPCTL	50.0245360154114	1.7418937515398478	2				NaN	NaN	0	NaN	9205	3897	13103
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13122	35.071	NaN	1870.9	30	0	319.76	0.214	+			33410	RIGGISGIFK	10	52	524.3192658731456	NaN	0	524.3189086914062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RIGGISGIFK_	DBR1|p.S129F|1|0.37|ENSG00000138231|chr3:138171650-138171650|G/A|missense_variant;DBR1|p.S224Lfs*6|1|0.26|ENSG00000138231|chr3:138167125-138167125|A/-|frameshift_variant;DBR1|p.Y142Lfs*2|1|0.38|ENSG00000138231|chr3:138170173-138170174|-/G|frameshift_variant;ENSG00000138231|ENST00000260803|DBR1;ENST00000463982.2_1_3:137890290-137893637:-|nuORF	63.69406221917213	0.2041119171819927	2				NaN	NaN	0	NaN	9220	3900	13121
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13123	35.075	NaN	1388.2	30	0	477.06	0.106			+	5168	ATTALVPPIP	10	38	490.2944092341288	NaN	0	490.2944641113281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATTALVPPIP_	REV__MUC5B|p.T3977A|1|0.04|ENSG00000117983|chr11:1248809-1248809|A/G|missense_variant	47.91560031466742	0.31878035802558913	2				NaN	NaN	0	NaN	9221	3900	13121
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13124	35.077	NaN	893.73	30	0	532.01	0.035	+			25249	LNIVGLVGSI	10	25	492.8076171875	NaN	0	492.8076171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LNIVGLVGSI_	ENSG00000152556|ENST00000359794|PFKM;ENST00000546964.5_1_12:48513149-48528944:+|nuORF;nc|ENSG00000152556|P08237-2|PFKM;nc|ENSG00000152556|P08237-3|PFKM;PFKM|p.A266Efs*59|1|0.04|ENSG00000152556|chr12:48134991-48134992|-/AGGGATTT|frameshift_variant	20.94693142431847	0.4201028297492154	2				NaN	NaN	0	NaN	9222	3900	13121
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13159	35.152	NaN	2048.3	30	0	522.18	0.144	+			48484	VTMKEILLK	9	51	537.8329193404697	1073.6512857477394	2	537.8336791992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTMKEILLK_	ENSG00000119487|ENST00000265960|MAPKAP1;nc|ENSG00000119487|Q9BPZ7-2|MAPKAP1;nc|ENSG00000119487|Q9BPZ7-3|MAPKAP1;nc|ENSG00000119487|Q9BPZ7-4|MAPKAP1;nc|ENSG00000119487|Q9BPZ7-5|MAPKAP1;nc|ENSG00000119487|Q9BPZ7-6|MAPKAP1	80.45461616416974	0.09558281504443908	2				NaN	NaN	0	NaN	9251	3906	13158
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13177	35.191	NaN	1697.3	30	0	458.2	0.142	+			43138	TESGKTLLL	9	39	481.2814042776501	960.5482556221002	2	481.28118896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TESGKTLLL_	ENSG00000099991|ENST00000263119|CABIN1;nc|ENSG00000099991|Q9Y6J0-2|CABIN1	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	9266	3909	13176
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13194	35.227	NaN	992.58	30	0	217.91	0.142	+			42781	TEAGALHVL	9	38	455.75362416161704	NaN	0	455.753662109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEAGALHVL_	ENSG00000105639|ENST00000458235|JAK3;ENST00000526008.5_1_19:17949989-17958765:-|nuORF;ENST00000527031.5_1_19:17947866-17955268:-|nuORF;ENST00000528293.1_1_19:17953965-17958870:-|nuORF;JAK3|p.Q39Pfs*13|1|0.25|ENSG00000105639|chr19:17844302-17844303|-/G|frameshift_variant;JAK3|p.Q39Sfs*108|1|0.12|ENSG00000105639|chr19:17844303-17844303|G/-|frameshift_variant;nc|ENSG00000105639|P52333-2|JAK3;nc|ENSG00000105639|P52333-4|JAK3	55.50420428727701	0.16876052142120426	2				NaN	NaN	0	NaN	9280	3912	13193
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13229	35.304	NaN	3928.6	30	0	762.95	0.214	+			44943	TVATAVEQY	9	55	491.2483300439797	NaN	0	491.2482604980469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVATAVEQY_	ENSG00000116209|ENST00000234831|TMEM59	124.08010499294276	0.0015010289275841425	2				NaN	NaN	0	NaN	9309	3918	13228
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13230	35.307	NaN	2298	30	0	859.42	0.031				-1	 	0	22	379.2092302351763	756.4039075371526	2	379.2098083496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9310	3918	13228
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13278	35.413	NaN	2265	30	0	1216.8	0.214	+			2303	AMFNIRNIGK	10	28	388.54996759063664	NaN	0	388.550048828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AMFNIRNIGK_	ENSG00000145425|ENST00000274065|RPS3A;ENST00000419176.1_1_10:70434132-70434327:+|nuORF;ENST00000493479.1_1_4:153472952-153473506:-|nuORF;ENST00000507485.1_1_4:152020792-152024033:+|nuORF	30.317721548370564	0.4006274431774794	2				NaN	NaN	0	NaN	9349	3927	13277
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13279	35.416	NaN	762.05	30	0	317.74	0.106	+			18737	ITHSDKIY	8	23	488.7586767998103	NaN	0	488.758544921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ITHSDKIY_	GRM1|p.A256T|1|0.62|ENSG00000152822|chr6:146159413-146159413|G/A|missense_variant	31.954861631926434	1.7418937515398478	2				NaN	NaN	0	NaN	9350	3927	13277
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13280	35.418	NaN	1995.5	30	0	284.55	0.035			+	31509	QLFADVILK	9	47	523.8169456196366	1045.6193383060731	2	523.81787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QLFADVILK_	REV__ENSG00000151461|ENST00000357604|UPF2	93.1432384553994	0.056003526918089595	2				NaN	NaN	0	NaN	9351	3927	13277
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13315	35.494	NaN	3784.6	30	0	950.27	0.141	+			46225	VEAPMPKL	8	47	442.7494005837957	883.4842482343914	2	442.74951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VEAPMPKL_	ENSG00000106211|ENST00000248553|HSPB1;ENST00000423240.1_1_9:74622799-74623024:-|nuORF	87.75429964447693	0.2842685068779738	2				NaN	NaN	0	NaN	9380	3933	13314
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13349	35.568	NaN	1097.3	30	0	351.54	0.142	+			45030	TVGAFFASK	9	30	464.25055901314005	926.4865650930801	2	464.2508544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVGAFFASK_	ENSG00000129473|ENST00000250405|BCL2L2	49.536043120802724	0.308405419312776	2				NaN	NaN	0	NaN	9408	3939	13348
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13412	35.71	NaN	821.53	30	0	272.6	0.142			+	12879	GERLAREH	8	20	484.2584533691406	NaN	0	484.2584533691406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GERLAREH_	REV__ENSG00000183305|ENST00000682532|MAGEA2B;REV__ENSG00000268606|ENST00000684311|MAGEA2	31.954861631926434	1.7418937515398478	2				NaN	NaN	0	NaN	9459	3951	13411
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13430	35.749	NaN	2098	30	0	487.29	0.214	+			50645	YEDLKAEL	8	48	490.7504441250008	NaN	0	490.75091552734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YEDLKAEL_	ENSG00000127831|ENST00000248444|VIL1	42.86426827375447	1.7418937515398478	2				NaN	NaN	0	NaN	9474	3954	13429
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13431	35.753	NaN	2438.8	30	0	224.27	0.037				-1	PTLESACLSF	10	61	562.7684815580578	1123.5224101829156	2	562.7693481445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_PTLESAC(Carbamidomethyl (C))LSF_	TMPRSS15|p.P420S|1|0.07|ENSG00000154646|chr21:18343974-18343974|G/A|missense_variant	108.08749611321984	0.05367918236594901	2				NaN	NaN	0	NaN	9475	3954	13429
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13449	35.789	NaN	3619.3	30	0	713.07	0.144	+			45279	TVQVYIITK	9	56	532.8208438047319	1063.6271346762637	2	532.82275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVQVYIITK_	ENSG00000114388|ENST00000232501|NPRL2;ENST00000479512.5_1_3:50387244-50387426:-|nuORF;ENST00000487632.5_1_3:50386870-50387426:-|nuORF	57.148748479083515	0.2373828479495039	2				NaN	NaN	0	NaN	9490	3957	13448
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13500	35.902	NaN	3375.9	30	0	1099.8	0.142			+	24960	LLALLAGGAL	10	46	456.2999065214125	910.585260109625	2	456.29937744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LLALLAGGAL_	REV__ENSG00000167700|ENST00000301327|MFSD3;REV__ENST00000526749.1_1_8:145735004-145735891:+|nuORF;REV__ENST00000528047.5_1_8:145734716-145735997:+|nuORF;REV__MFSD3|p.H329Tfs*15|1|0.44|ENSG00000167700|chr8:144510823-144510823|C/-|frameshift_variant	65.89745868150666	0.31220354485832413	2				NaN	NaN	0	NaN	9532	3966	13499
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13518	35.941	NaN	5698.6	30	0	1002.7	0.142	+			26688	LVHLEQAV	8	52	454.76367085372254	907.5127887742451	2	454.76385498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LVHLEQAV_	ENSG00000010292|ENST00000315579|NCAPD2	49.44154591367651	0.597725784090933	2				NaN	NaN	0	NaN	9547	3969	13517
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13536	35.979	NaN	1307.5	30	0	236.44	0.142				-1	QLTGPVMPV	9	37	479.257598857959	NaN	0	479.2575378417969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_QLTGPVM(Oxidation (M))PV_	ENSG00000167526|ENST00000311528|RPL13;ENST00000399461.8_1_16:89627605-89629447:+|nuORF;ENST00000484610.5_1_16:89627907-89629447:+|nuORF;ENST00000570149.1_1_16:89628679-89629447:+|nuORF;nc|ENSG00000167526|P26373-2|RPL13	47.91560031466742	0.22105767942158736	2				NaN	NaN	0	NaN	9562	3972	13535
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13639	36.21	NaN	3414.1	30	0	1371.2	0.141	+			30851	QEGIVHVL	8	41	447.75615744338495	893.4977619535699	2	447.7561340332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QEGIVHVL_	ENSG00000186951|ENST00000407236|PPARA;PPARA|p.M430Wfs*8|1|0.27|ENSG00000186951|chr22:46235256-46235256|A/-|frameshift_variant	71.37791200682192	0.3954169775488141	2				NaN	NaN	0	NaN	9647	3990	13638
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13690	36.321	NaN	3599	30	0	928.24	0.214	+			27685	MPVASSEASTL	11	55	546.7658823805522	1091.5172118279042	2	546.7658081054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MPVASSEASTL_	ENSG00000169876|ENST00000306151|MUC17;ENSG00000169876|ENST00000306151|MUC17;ENSG00000169876|ENST00000306151|MUC17;MUC17|p.N4205Tfs*18|1|0.07|ENSG00000169876|chr7:101048918-101048918|A/-|frameshift_variant;MUC17|p.N4205Tfs*18|1|0.07|ENSG00000169876|chr7:101048918-101048918|A/-|frameshift_variant;MUC17|p.N4205Tfs*18|1|0.07|ENSG00000169876|chr7:101048918-101048918|A/-|frameshift_variant;MUC17|p.S3486Qfs*18|1|0.41|ENSG00000169876|chr7:101041869-101041870|-/C|frameshift_variant;MUC17|p.S3486Qfs*18|1|0.41|ENSG00000169876|chr7:101041869-101041870|-/C|frameshift_variant;MUC17|p.S3486Qfs*18|1|0.41|ENSG00000169876|chr7:101041869-101041870|-/C|frameshift_variant;nc|ENSG00000169876|Q685J3-2|MUC17;nc|ENSG00000169876|Q685J3-2|MUC17;nc|ENSG00000169876|Q685J3-2|MUC17	115.49404669440601	0.02884261706706408	2				NaN	NaN	0	NaN	9689	3999	13689
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13691	36.325	NaN	2572.9	30	0	654.21	0.033			+	27258	METALHLA	8	55	443.2284448453043	884.4423367574086	2	443.2285461425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_METALHLA_	REV__ENSG00000077150|ENST00000661543|NFKB2;REV__ENST00000473400.1_1_10:104160383-104160916:+|nuORF;REV__nc|ENSG00000077150|Q00653-4|NFKB2	54.76467175910256	0.5536104764165384	2				NaN	NaN	0	NaN	9690	3999	13689
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13703	36.35	NaN	1249.5	30	0	312.53	0.141	+			10703	FAADAVKL	8	44	417.74001929425884	NaN	0	417.7403564453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FAADAVKL_	ENSG00000177156|ENST00000319006|TALDO1;ENST00000530666.1_1_11:764238-764842:+|nuORF;nc|ENSG00000177156|P37837-2|TALDO1	87.75429964447693	1.7418937515398478	2				NaN	NaN	0	NaN	9699	4002	13702
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13716	36.378	NaN	2661.6	30	0	503.86	0.214	+			10837	FASKALEL	8	44	439.75276771890094	877.4909825046019	2	439.75286865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FASKALEL_	ENSG00000115183|ENST00000263635|TANC1;ENST00000470074.1_1_2:160076105-160087520:+|nuORF;nc|ENSG00000115183|Q9C0D5-2|TANC1	111.64827973302667	0.24425243057279236	2				NaN	NaN	0	NaN	9709	4005	13715
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13717	36.382	NaN	1145.1	30	0	156.57	0.034	+			27098	MANGAVIHL	9	43	463.2500305175781	NaN	0	463.2500305175781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MANGAVIHL_	ENSG00000099995|ENST00000215793|SF3A1;nc|ENSG00000099995|Q15459-2|SF3A1	85.35947970620816	0.05301898140525511	2				NaN	NaN	0	NaN	9710	4005	13715
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13735	36.418	NaN	3143	30	0	593.15	0.142	+			48228	VTAVPTLLK	9	49	471.3050794212852	940.5956059093704	2	471.3052978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTAVPTLLK_	ENSG00000129235|ENST00000250101|TXNDC17;ENST00000571029.1_1_17:6544987-6546336:+|nuORF	67.49366992349736	0.1516260258713357	2				NaN	NaN	0	NaN	9725	4008	13734
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13753	36.456	NaN	867.13	30	0	182.34	0.214	+			28530	NIIGLLDAF	9	37	488.2809753417969	NaN	0	488.2809753417969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NIIGLLDAF_	ENSG00000134058|ENST00000256443|CDK7;ENST00000512687.5_1_5:68530748-68551520:+|nuORF	44.116797842482775	0.2472372736944149	2				NaN	NaN	0	NaN	9740	4011	13752
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13754	36.46	NaN	956.1	30	0	179.99	0.035	+			38082	SPSYSVTQM	9	37	500.2262495645916	NaN	0	500.2255859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SPSYSVTQM_	ENSG00000145113|ENST00000463781|MUC4;MUC4|p.L3985Ffs*274|1|0.3|ENSG00000145113|chr3:195779627-195779627|G/-|frameshift_variant;MUC4|p.N4902Tfs*8|1|0.37|ENSG00000145113|chr3:195761027-195761027|T/-|frameshift_variant;nc|ENSG00000145113|Q99102-10|MUC4;nc|ENSG00000145113|Q99102-11|MUC4;nc|ENSG00000145113|Q99102-15|MUC4;nc|ENSG00000145113|Q99102-16|MUC4;nc|ENSG00000145113|Q99102-17|MUC4;nc|ENSG00000145113|Q99102-2|MUC4;nc|ENSG00000145113|Q99102-3|MUC4;nc|ENSG00000145113|Q99102-5|MUC4;nc|ENSG00000145113|Q99102-7|MUC4;nc|ENSG00000145113|Q99102-8|MUC4;nc|ENSG00000145113|Q99102-9|MUC4	66.42927471994793	0.121898005645852	2				NaN	NaN	0	NaN	9741	4011	13752
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13813	36.592	NaN	1117.9	30	0	129.82	0.214	+			46206	VEAGGMQAL	9	44	438.21841936881475	NaN	0	438.218505859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VEAGGMQAL_	ENSG00000168036|ENST00000349496|CTNNB1;ENSG00000173801|ENST00000393931|JUP	108.08749611321984	0.011424279626857025	2				NaN	NaN	0	NaN	9788	4023	13812
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13814	36.596	NaN	1546.9	30	0	671.18	0.106	+			2574	AQDLVDILQ	9	53	507.77600460488844	1013.5374562765769	2	508.2776794433594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AQDLVDILQ_	ENSG00000129355|ENST00000393599|CDKN2D	79.71258880314673	0.09879134589249085	2				NaN	NaN	0	NaN	9789	4023	13812
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13815	36.598	NaN	3666.9	30	0	502.02	0.037			+	24774	LIELLDDNSL	10	53	572.8093900106252	1143.6042270880503	2	572.8112182617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LIELLDDNSL_	REV__DNAH2|p.I2363Yfs*40|1|0.31|ENSG00000183914|chr17:7792278-7792278|C/-|frameshift_variant;REV__DNAH2|p.K4326Rfs*84|3|0.27|ENSG00000183914|chr17:7832920-7832920|C/-|frameshift_variant;REV__DNAH2|p.Q4263Sfs*13|1|0.12|ENSG00000183914|chr17:7832639-7832639|C/-|frameshift_variant;REV__ENSG00000183914|ENST00000572933|DNAH2;REV__ENST00000574518.1_1_17:7674005-7689702:+|nuORF;REV__nc|ENSG00000183914|Q9P225-2|DNAH2	86.88156770896713	0.14892753630261096	2				NaN	NaN	0	NaN	9790	4023	13812
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13850	36.673	NaN	7252.8	30	0	679.9	0.143	+			32580	QYAPSTAQF	9	52	506.7405569141291	1011.4665608950583	2	506.7407531738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QYAPSTAQF_	ENSG00000122515|ENST00000309315|ZMIZ2;nc|ENSG00000122515|Q8NF64-2|ZMIZ2;nc|ENSG00000122515|Q8NF64-3|ZMIZ2	78.26377905018397	0.10505600812668463	2				NaN	NaN	0	NaN	9819	4029	13849
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13899	36.783	NaN	4175.1	30	0	765.89	0.142	+			42195	TAADTAVYY	9	46	487.72664878405106	973.4387446349022	2	487.7267761230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAADTAVYY_	nc|ENSG00000211956|P06331|IGHV4-34;nc|ENSG00000211959|P01824|IGHV4-39;nc|ENSG00000211970|A0A0C4DH41|IGHV4-61;nc|ENSG00000224373|P01825|IGHV4-59;nc|ENSG00000231475|A0A087WSY4|IGHV4-30-2;nc|ENSG00000231475|P0DP07|IGHV4-31;nc|ENSG00000276775|A0A075B6R2|IGHV4-4	94.00642277110589	0.05356993013874309	2				NaN	NaN	0	NaN	9859	4038	13898
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13917	36.821	NaN	6769.5	30	0	1311.4	0.214	+			28127	NAISVTTSY	9	61	478.2398747576042	954.4651965820084	2	478.23992919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAISVTTSY_	ENSG00000198730|ENST00000361367|CTR9	180.92599232761785	0.0012030822705978085	2				NaN	NaN	0	NaN	9874	4041	13916
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13918	36.825	NaN	2181	30	0	542.87	0.106	+			47463	VPVTTEVSY	9	38	497.75807427506885	993.5015956169377	2	497.7579650878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VPVTTEVSY_	nc|ENSG00000198788|Q02817|MUC2	55.50420428727701	0.2510918378945873	2				NaN	NaN	0	NaN	9875	4041	13916
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13919	36.827	NaN	942.36	30	0	173.77	0.035	+			49050	VVINCAIVR	9	43	493.7943420410156	NaN	0	493.7943420410156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVINCAIVR_	ENSG00000125753|ENST00000245932|VASP;ENST00000586619.1_1_19:46010999-46025451:+|nuORF;VASP|p.A167Lfs*101|1|0.36|ENSG00000125753|chr19:45522354-45522354|C/-|frameshift_variant;VASP|p.P119Lfs*34|1|0.18|ENSG00000125753|chr19:45521330-45521330|C/-|frameshift_variant	63.30626980617807	0.13521764763214936	2				NaN	NaN	0	NaN	9876	4041	13916
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14009	37.03	NaN	1760.4	30	0	340.05	0.215	+			27842	MTADVIELK	9	50	510.2757030540876	1018.5368531749752	2	510.7788391113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MTADVIELK_	ENSG00000067704|ENST00000366922|IARS2	65.46538089061403	0.16805504838372562	2				NaN	NaN	0	NaN	9948	4059	14008
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14010	37.034	NaN	507.26	30	0	50.422	0.035	+			42686	TCLPEYEM	8	28	493.2043762207031	NaN	0	493.2043762207031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TCLPEYEM_	tr|U7SU07|U7SU07_FUSNUSulfitereductase,subunitCOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01055PE=3SV=1	25.450171626174864	1.7418937515398478	2				NaN	NaN	0	NaN	9949	4059	14008
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14042	37.103	NaN	1884.8	30	0	858.76	0.143	+			32595	QYGSALAHF	9	47	497.24361660257557	NaN	0	497.2433166503906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QYGSALAHF_	ENSG00000170915|ENST00000442253|PAQR8	68.484700416344	0.11313159791952428	2				NaN	NaN	0	NaN	9975	4065	14041
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14076	37.177	NaN	1156.7	30	0	375	0.214			+	49514	VWVAMTVL	8	32	459.7611999511719	NaN	0	459.7611999511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VWVAMTVL_	REV__ENSG00000173578|ENST00000309285|XCR1	39.021493756699265	1.7418937515398478	2				NaN	NaN	0	NaN	10003	4071	14075
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14077	37.181	NaN	1139.6	30	0	276.61	0.035				-1	LVLGVDSSY	9	43	497.758544921875	NaN	0	497.758544921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LVLGVDSSY_	ENST00000347635.8_1_22:45559863-45559941:+|nuORF	38.80614096846853	0.28164298475537564	2				NaN	NaN	0	NaN	10004	4071	14075
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14095	37.218	NaN	1037.3	30	0	359.13	0.142				-1	TVSVALVLC	9	31	481.27292965674707	NaN	0	481.2728576660156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_TVSVALVLC(Carbamidomethyl (C))_	ENSG00000141564|ENST00000306801|RPTOR;ENST00000577161.5_1_17:78519375-78883449:+|nuORF;nc|ENSG00000141564|Q8N122-2|RPTOR;nc|ENSG00000141564|Q8N122-3|RPTOR	47.91560031466742	0.22105767942158736	2				NaN	NaN	0	NaN	10019	4074	14094
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14142	37.323	NaN	1897.1	30	0	825.59	0.143	+			840	AEGKFAQKE	9	56	504.2616882324219	NaN	0	504.2616882324219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEGKFAQKE_	ENSG00000171804|ENST00000447313|WDR87;nc|ENSG00000171804|Q6ZQQ6-2|WDR87;nc|ENSG00000171804|Q6ZQQ6|WDR87;WDR87|p.A2794Pfs*4|1|0.26|ENSG00000171804|chr19:37885175-37885175|T/-|frameshift_variant;WDR87|p.K2720Rfs*57|5|0.35|ENSG00000171804|chr19:37885395-37885395|T/-|frameshift_variant;WDR87|p.Q1927Tfs*32|1|0.44|ENSG00000171804|chr19:37887775-37887776|-/T|frameshift_variant;WDR87|p.R2063Gfs*11|1|0.12|ENSG00000171804|chr19:37887367-37887367|T/-|frameshift_variant;WDR87|p.R2063Kfs*25|1|0.32|ENSG00000171804|chr19:37887366-37887367|-/T|frameshift_variant	47.95952297671804	0.22075498469600283	2				NaN	NaN	0	NaN	10057	4083	14141
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14186	37.423	NaN	4907.7	30	0	958.69	0.143	+			2316	AMLDTVVFK	9	60	520.2779637139072	1038.5413744946143	2	520.7802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_AM(Oxidation (M))LDTVVFK_	ENSG00000115233|ENST00000409682|PSMD14;ENST00000477232.5_1_2:162241962-162267908:+|nuORF;ENST00000492908.1_1_2:162265323-162267908:+|nuORF	93.19546047674547	0.05585629608842056	2				NaN	NaN	0	NaN	10092	4092	14185
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14218	37.493	NaN	2794.8	30	0	467.41	0.142	+			28432	NEVKIYSL	8	64	483.2687592588162	964.5229655844324	2	483.7707824707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NEVKIYSL_	ENSG00000115761|ENST00000381685|NOL10;ENST00000473087.1_1_2:10822102-10830002:-|nuORF;nc|ENSG00000115761|Q9BSC4-2|NOL10;nc|ENSG00000115761|Q9BSC4-4|NOL10	74.1650062923329	0.37219359694823656	2				NaN	NaN	0	NaN	10118	4098	14217
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14232	37.524	NaN	3117	30	0	599.08	0.14	+			23551	LAKVGIAL	8	40	392.7678522652256	783.5211515972512	2	392.7679443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LAKVGIAL_	ENSG00000089154|ENST00000300648|GCN1	109.7037559375365	0.24532522259121695	2				NaN	NaN	0	NaN	10129	4101	14231
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14265	37.597	NaN	1122.3	30	0	262.88	0.214	+			50519	YAPSGNFV	8	30	427.706197616805	NaN	0	427.7059326171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YAPSGNFV_	ENSG00000111664|ENST00000229264|GNB3;ENSG00000172354|ENST00000303210|GNB2;ENST00000470354.1_1_7:100275135-100275402:+|nuORF;nc|ENSG00000111664|P16520-2|GNB3;nc|ENSG00000172354|P62879-2|GNB2	58.78195531508484	1.7418937515398478	2				NaN	NaN	0	NaN	10156	4107	14264
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14266	37.6	NaN	2166.2	30	0	1175	0.106	+			27952	MVICDIRV	8	28	474.75331369879916	947.4920744643983	2	474.7535095214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MVICDIRV_	ENSG00000009694|ENST00000371130|TENM1;nc|ENSG00000009694|Q9UKZ4-2|TENM1	44.116797842482775	0.6307669463330267	2				NaN	NaN	0	NaN	10157	4107	14264
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14267	37.602	NaN	1700.3	30	0	1053.7	0.034	+			12346	GDLANSQLL	9	38	465.74853515625	NaN	0	465.74853515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GDLANSQLL_	ENST00000460343.5_1_3:53260493-53260973:-|nuORF	42.396135135203025	0.2590952873412954	2				NaN	NaN	0	NaN	10158	4107	14264
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14297	37.668	NaN	1067.7	30	0	395.64	0.142	+			18243	IPAAVKLTY	9	41	488.29730224609375	NaN	0	488.29730224609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IPAAVKLTY_	ENSG00000104517|ENST00000520539|UBR5;nc|ENSG00000104517|O95071-2|UBR5;UBR5|p.E2121Kfs*28|1|0.39|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant;UBR5|p.E2121Rfs*13|1|0.28|ENSG00000104517|chr8:102277120-102277121|-/T|frameshift_variant;UBR5|p.F2571Lfs*4|2|0.31|ENSG00000104517|chr8:102262044-102262044|A/-|frameshift_variant;UBR5|p.K2120Rfs*13|1|0.24|ENSG00000104517|chr8:102277121-102277122|TT/-|frameshift_variant	98.58198989935565	0.02429614701295995	2				NaN	NaN	0	NaN	10182	4113	14296
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14327	37.735	NaN	1891.9	30	0	511.79	0.142	+			47321	VPADAVVQY	9	35	481.2528499573342	960.4911469814684	2	481.2536315917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VPADAVVQY_	ENSG00000134285|ENST00000550765|FKBP11;ENST00000546847.5_1_12:49315769-49317670:-|nuORF	51.33545320467046	0.2872990594074956	2				NaN	NaN	0	NaN	10206	4119	14326
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14350	37.789	NaN	1185.6	30	0	285.96	0.144	+			50017	WCNLSALLY	9	33	541.7715276846474	1081.5285024360946	2	542.2741088867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WCNLSALLY_	GPR161|p.F102L|1|0.26|ENSG00000143147|chr1:168104545-168104545|G/T|missense_variant	63.30626980617807	0.18605348971131092	2				NaN	NaN	0	NaN	10223	4125	14349
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14510	38.21	NaN	1015	30	0	203.13	0.142			+	47296	VNLAHKSY	8	42	466.2525939941406	NaN	0	466.2525939941406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VNLAHKSY_	REV__ENSG00000151014|ENST00000280614|NOCT	26.79610172149135	1.7418937515398478	2				NaN	NaN	0	NaN	10329	4179	14509
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14521	38.235	NaN	5975.9	30	0	3114.3	0.143	+			2541	AQAILVPEPP	10	48	517.7971227699193	1033.5796926066384	2	518.2998657226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AQAILVPEPP_	ENST00000494373.1_1_2:54014347-54015815:+|nuORF	51.52775601994872	0.4429225830406686	2				NaN	NaN	0	NaN	10337	4182	14520
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14560	38.332	NaN	1547.7	30	0	424.06	0.143	+			30805	QEAPALVRL	9	45	498.7954023177929	NaN	0	498.79486083984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QEAPALVRL_	ENSG00000254470|ENST00000532090|AP5B1;ENST00000316846.2_11:65545618-65547282:-|nuORF	54.776311868738084	0.17377682019723872	2				NaN	NaN	0	NaN	10364	4194	14559
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14571	38.357	NaN	3526.2	30	0	612.52	0.214	+			1413	AEVVLAHL	8	44	426.2529039882057	NaN	0	426.2530212402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEVVLAHL_	ENSG00000163902|ENST00000296255|RPN1;ENST00000481168.1_1_3:128363760-128369658:-|nuORF;ENST00000497415.1_1_3:128359957-128369658:-|nuORF	96.04771818265245	1.7418937515398478	2				NaN	NaN	0	NaN	10372	4197	14570
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14572	38.361	NaN	2025.9	30	0	210.4	0.036			+	31417	QKLQLVIQK	9	56	549.3558574899482	1096.6971620466963	2	549.3570556640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QKLQLVIQK_	REV__CCBE1|p.T211I|1|0.3|ENSG00000183287|chr18:59454873-59454873|G/A|missense_variant	90.60085204095205	0.06317133949006545	2				NaN	NaN	0	NaN	10373	4197	14570
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14746	38.785	NaN	1289.8	30	0	192.57	0.143	+			51192	YPLEAVRM	8	45	489.7576009248329	NaN	0	489.75750732421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YPLEAVRM_	ENSG00000067225|ENST00000335181|PKM;ENST00000563986.1_1_15:72494793-72499131:-|nuORF;ENST00000570166.1_1_15:72495361-72499152:-|nuORF;nc|ENSG00000067225|P14618-2|PKM;nc|ENSG00000067225|P14618-3|PKM	49.44154591367651	1.7418937515398478	2				NaN	NaN	0	NaN	10499	4245	14745
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14812	38.947	NaN	3376.9	30	0	1141.9	0.141	+			44916	TVAGLALIK	9	42	443.2922237782846	884.5698946233692	2	443.7937316894531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVAGLALIK_	ENSG00000105835|ENST00000222553|NAMPT;ENST00000467730.1_1_7:105908908-105909650:-|nuORF;ENST00000491027.5_1_7:105903822-105925330:-|nuORF	68.78682469695295	0.14603441672067394	2				NaN	NaN	0	NaN	10547	4263	14811
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14924	39.221	NaN	1480.1	30	0	416.68	0.144			+	17193	HTSTVLTYF	9	36	534.7718034355939	1067.5290539379878	2	534.771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HTSTVLTYF_	REV__ENSG00000010361|ENST00000313777|FUZ;REV__ENST00000525370.5_1_19:50310410-50314932:-|nuORF;REV__ENST00000534138.1_1_19:50311551-50312077:-|nuORF;REV__nc|ENSG00000010361|Q9BT04-2|FUZ;REV__nc|ENSG00000010361|Q9BT04-3|FUZ	47.91560031466742	0.327412564698279	2				NaN	NaN	0	NaN	10629	4293	14923
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14949	39.279	NaN	4429.6	30	0	1283.7	0.214	+			46221	VEALIHAI	8	53	433.2607391545788	864.5069253759576	2	433.26080322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VEALIHAI_	ENSG00000173801|ENST00000393931|JUP	105.26878712358291	0.24777199087279123	2				NaN	NaN	0	NaN	10648	4299	14948
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14950	39.282	NaN	951.98	30	0	224.25	0.106			+	27192	MEAPRRCP	8	24	480.22930344873134	NaN	0	480.228759765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MEAPRRCP_	REV__ENST00000476746.5_1_2:198360008-198364584:-|nuORF	65.80317337860623	1.7418937515398478	2				NaN	NaN	0	NaN	10649	4299	14948
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14951	39.284	NaN	628.18	30	0	126.17	0.106	+			31225	QGVLGIKVKL	10	24	527.8531251005023	1053.6916972678046	2	527.8544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QGVLGIKVKL_	ENST00000421346.1_1_20:37166917-37166977:+|nuORF	42.396135135203025	0.5270658956260207	2				NaN	NaN	0	NaN	10650	4299	14948
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14952	39.286	NaN	499.1	30	0	159.51	0.033	+			41942	SVVSIVIGK	9	18	451.29010009765625	NaN	0	451.29010009765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVVSIVIGK_	nc|ENSG00000136144|Q8NDN9-2|RCBTB1	47.657333605630114	0.2228375344433429	2				NaN	NaN	0	NaN	10651	4299	14948
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14988	39.37	NaN	4170.4	30	0	1380.9	0.143	+			37135	SITSVFITK	9	46	498.2920801638077	994.5696073944155	2	498.2921142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SITSVFITK_	ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;TRRAP-ASNS|1|fusion;TRRAP-ASNS|2|fusion;TRRAP|p.K3443Sfs*19|1|0.28|ENSG00000196367|chr7:99004246-99004246|A/-|frameshift_variant	129.42129120953632	0.01549634589885217	2				NaN	NaN	0	NaN	10678	4308	14987
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15002	39.4	NaN	1266.9	30	0	245.81	0.143			+	-1	VTAVMVLTK	9	49	489.2872709096504	NaN	0	489.2879943847656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_VTAVM(Oxidation (M))VLTK_	REV__MYBL1|p.N420Tfs*13|1|0.23|ENSG00000185697|chr8:66576218-66576218|T/-|frameshift_variant	44.116797842482775	0.2472372736944149	2				NaN	NaN	0	NaN	10689	4311	15001
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15044	39.504	NaN	3158.1	30	0	710.02	0.142	+			23993	LEAAKALVL	9	60	464.29720859106834	NaN	0	464.2969055175781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LEAAKALVL_	ENSG00000166888|ENST00000300134|STAT6;ENST00000555641.1_1_12:57499966-57502061:-|nuORF;nc|ENSG00000166888|P42226-2|STAT6;nc|ENSG00000166888|P42226-3|STAT6;STAT6|p.G815Efs*27|3|0.31|ENSG00000166888|chr12:57096672-57096672|C/-|frameshift_variant	127.46168284122857	0.0009793558177450096	2				NaN	NaN	0	NaN	10719	4323	15043
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15075	39.58	NaN	3847.9	30	0	905.84	0.142	+			46517	VEVVITHL	8	47	455.2739863522328	NaN	0	455.2741394042969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VEVVITHL_	ENSG00000153048|ENST00000311052|CARHSP1	90.77665401227738	1.7418937515398478	2				NaN	NaN	0	NaN	10741	4332	15074
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15097	39.632	NaN	1807	30	0	229.59	0.143	+			28764	NPEAAVHIF	9	53	499.2586597369433	996.5027665406866	2	499.26031494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NPEAAVHIF_	ENSG00000138246|ENST00000260818|DNAJC13	87.69643885390035	0.07135982304947239	2				NaN	NaN	0	NaN	10757	4338	15096
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15227	39.963	NaN	3214.1	30	0	1085.4	0.143			+	7255	DALSTFLVK	9	45	497.28451529494004	992.5544776566801	2	497.2846984863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DALSTFLVK_	REV__ENSG00000131018|ENST00000367255|SYNE1;REV__ENST00000367256.9_1_6:152443573-152639413:-|nuORF;REV__nc|ENSG00000131018|Q8NF91-2|SYNE1;REV__nc|ENSG00000131018|Q8NF91-4|SYNE1;REV__nc|ENSG00000131018|Q8NF91-8|SYNE1;REV__SYNE1|p.G6773Wfs*7|1|0.44|ENSG00000131018|chr6:152236186-152236187|-/A|frameshift_variant;REV__SYNE1|p.K6871Rfs*22|2|0.52|ENSG00000131018|chr6:152233881-152233881|T/-|frameshift_variant;REV__SYNE1|p.L8283Pfs*8|1|0.19|ENSG00000131018|chr6:152148173-152148174|-/G|frameshift_variant;REV__SYNE1|p.V8635Sfs*12|1|0.15|ENSG00000131018|chr6:152133375-152133375|T/-|frameshift_variant	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	10848	4377	15226
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15262	40.047	NaN	1713.3	30	0	326.7	0.143			+	48276	VTDNTIYY	8	46	494.734625855929	987.454698778658	2	494.73480224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTDNTIYY_	REV__ENSG00000144028|ENST00000323853|SNRNP200	71.37791200682192	0.3954169775488141	2				NaN	NaN	0	NaN	10874	4386	15261
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15372	40.333	NaN	7117.6	30	0	2611.1	0.142	+			18876	IVGTVLIIK	9	50	478.33099164572826	954.6474303582565	2	478.3315734863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IVGTVLIIK_	ENSG00000231389|ENST00000419277|HLA-DPA1	166.67852932204877	0.003333876602083393	2				NaN	NaN	0	NaN	10948	4422	15371
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15391	40.38	NaN	1458.9	30	0	502.01	0.142	+			44049	TPQGGIVVY	9	32	467.25526735656695	NaN	0	467.25537109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TPQGGIVVY_	ENSG00000104731|ENST00000270583|KLHDC4;ENST00000562913.5_1_16:87744798-87760508:-|nuORF;ENST00000566349.5_1_16:87741959-87776602:-|nuORF;KLHDC4|p.R361Qfs*9|1|0.36|ENSG00000104731|chr16:87709632-87709633|-/C|frameshift_variant;KLHDC4|p.R412Gfs*28|1|0.34|ENSG00000104731|chr16:87709478-87709478|G/-|frameshift_variant;nc|ENSG00000104731|Q8TBB5-2|KLHDC4;nc|ENSG00000104731|Q8TBB5-3|KLHDC4	44.116797842482775	0.2472372736944149	2				NaN	NaN	0	NaN	10961	4428	15390
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15418	40.449	NaN	7348.8	30	0	3460.1	0.143	+			31786	QPLKLDTSF	9	54	524.787291304279	1047.560029675358	2	524.7880249023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QPLKLDTSF_	ENSG00000126581|ENST00000590099|BECN1;ENST00000591307.5_1_17:40972740-40975895:-|nuORF	45.9519527083369	0.35044536499095585	2				NaN	NaN	0	NaN	10979	4437	15417
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15497	40.641	NaN	800.3	30	0	360.07	0.143			+	20847	KIKLATIEE	9	34	522.8188590411901	NaN	0	522.8192138671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KIKLATIEE_	REV__ENSG00000143178|ENST00000367821|TBX19;REV__ENSG00000164458|ENST00000366876|TBXT;REV__nc|ENSG00000164458|O15178-2|TBXT;REV__nc|ENSG00000164458|O15178|TBXT;REV__TBX19|p.S376Tfs*13|1|0.16|ENSG00000143178|chr1:168312782-168312782|G/-|frameshift_variant	27.047317107675042	0.34101084205454363	2				NaN	NaN	0	NaN	11037	4458	15496
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15868	41.783	NaN	3027.6	30	0	797.48	0.142	+			38052	SPQSTVTVF	9	40	483.25071889197636	964.4868848507527	2	483.2508850097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SPQSTVTVF_	ENSG00000100644|ENST00000337138|HIF1A;nc|ENSG00000100644|Q16665-2|HIF1A;nc|ENSG00000100644|Q16665-3|HIF1A	95.81516180277367	0.04847050768394289	2				NaN	NaN	0	NaN	11258	4608	15867
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15907	41.906	NaN	2138.1	30	0	507.06	0.144	+			27518	MPAAQEGAVAF	11	33	546.2632076539852	1090.5118623747703	2	546.2644653320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MPAAQEGAVAF_	ENSG00000231925|ENST00000434618|TAPBP;ENST00000480730.5_1_6:33272736-33281818:-|nuORF;nc|ENSG00000231925|O15533-2|TAPBP;nc|ENSG00000231925|O15533-3|TAPBP;nc|ENSG00000231925|O15533-4|TAPBP	41.42661286455405	0.5384226294179143	2				NaN	NaN	0	NaN	11279	4626	15906
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16110	42.558	NaN	1427	30	0	704.76	0.144				-1	 	0	36	540.2613484775421	539.2540720109421	1	540.2626342773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11380	4728	16109
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16122	42.594	NaN	1007.5	30	0	490.4	0.144			+	-1	KPNISMKIY	9	32	555.3044126983974	NaN	0	555.30419921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_KPNISM(Oxidation (M))KIY_	REV__CTBS|p.I336Pfs*5|1|0.06|ENSG00000117151|chr1:84555151-84555152|-/GTGGG|frameshift_variant;REV__ENSG00000117151|ENST00000370630|CTBS	35.61828744233558	0.29773779453147337	2				NaN	NaN	0	NaN	11386	4734	16121
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16185	42.778	NaN	1054.3	30	0	292.74	0.143	+			31770	QPGTTILQY	9	32	510.77213823144547	1019.529723529691	2	510.7724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QPGTTILQY_	ENSG00000118260|ENST00000353267|CREB1;nc|ENSG00000118260|P16220-1|CREB1	74.25504064058377	0.12238981753128622	2				NaN	NaN	0	NaN	11422	4761	16184
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16263	43.026	NaN	1962.6	30	0	316.66	0.143	+			28760	NPDPAVYQL	9	38	508.75668847444524	NaN	0	508.7569885253906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NPDPAVYQL_	nc|ENSG00000277734|P01848|TRAC	72.87924865735499	0.09578366712754152	2				NaN	NaN	0	NaN	11461	4800	16262
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16307	43.153	NaN	2450.7	30	0	520.53	0.143	+			25391	LPIEAPIRM	9	49	520.3016238343716	1038.5886947355432	2	520.3032836914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LPIEAPIRM_	ENSG00000198712|ENST00000361739|MT-CO2	82.24051045832904	0.08786059719216216	2				NaN	NaN	0	NaN	11487	4818	16306
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16381	43.422	NaN	1524.9	30	0	308.54	0.143	+			50823	YESKVFYL	8	33	524.7711849712286	1047.5278170092572	2	524.7721557617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YESKVFYL_	ENSG00000128245|ENST00000248975|YWHAH;ENSG00000170027|ENST00000307630|YWHAG;ENST00000397492.1_1_22:32346295-32352776:+|nuORF	54.776311868738084	0.5534952410049249	2				NaN	NaN	0	NaN	11513	4866	16380
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16434	43.627	NaN	920.86	30	0	393.39	0.143	+			29190	NVLDIMVTK	9	25	516.7919844991807	NaN	0	516.79248046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NVLDIMVTK_	ENSG00000096433|ENST00000605930|ITPR3;ITPR3|p.G531Vfs*50|1|0.15|ENSG00000096433|chr6:33667164-33667164|G/-|frameshift_variant;ITPR3|p.K608Sfs*66|1|0.34|ENSG00000096433|chr6:33667898-33667898|A/-|frameshift_variant;ITPR3|p.N1746Tfs*30|1|0.2|ENSG00000096433|chr6:33684872-33684872|A/-|frameshift_variant;ITPR3|p.R2604Gfs*30|1|0.27|ENSG00000096433|chr6:33694944-33694944|C/-|frameshift_variant	41.42661286455405	0.26577678759562784	2				NaN	NaN	0	NaN	11530	4902	16433
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16477	43.761	NaN	1918.4	30	0	1001.8	0.144	+			32430	QVIDGFFVK	9	42	526.792990608787	NaN	0	526.7946166992188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QVIDGFFVK_	ENSG00000172732|ENST00000308110|MUS81;ENST00000530928.5_1_11:65631499-65632379:+|nuORF	40.77816245573522	0.2702456086868081	2				NaN	NaN	0	NaN	11552	4923	16476
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16619	44.288	NaN	960.19	30	0	153.38	0.142	+			2449	APITTVVTM	9	36	466.7599792480469	NaN	0	466.7599792480469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_APITTVVTM_	ENSG00000117983|ENST00000529681|MUC5B;ENSG00000117983|ENST00000529681|MUC5B;MUC5B|p.E2447Vfs*233|1|0.15|ENSG00000117983|chr11:1244218-1244219|TG/-|frameshift_variant;MUC5B|p.E2929Gfs*98|1|0.13|ENSG00000117983|chr11:1245660-1245661|-/GC|frameshift_variant;MUC5B|p.E2929Gfs*98|1|0.13|ENSG00000117983|chr11:1245660-1245661|-/GC|frameshift_variant;MUC5B|p.P2717Qfs*3|2|0.21|ENSG00000117983|chr11:1245025-1245025|C/-|frameshift_variant;MUC5B|p.P3417Qfs*3|1|0.41|ENSG00000117983|chr11:1247125-1247125|C/-|frameshift_variant;MUC5B|p.P3417Qfs*3|1|0.41|ENSG00000117983|chr11:1247125-1247125|C/-|frameshift_variant;MUC5B|p.S3126Pfs*13|1|0.37|ENSG00000117983|chr11:1246251-1246251|C/-|frameshift_variant;MUC5B|p.S3126Pfs*13|1|0.37|ENSG00000117983|chr11:1246251-1246251|C/-|frameshift_variant;MUC5B|p.S3878Pfs*27|1|0.13|ENSG00000117983|chr11:1248507-1248507|C/-|frameshift_variant;MUC5B|p.S3878Pfs*27|1|0.13|ENSG00000117983|chr11:1248507-1248507|C/-|frameshift_variant;MUC5B|p.S4017Lfs*56|1|0.22|ENSG00000117983|chr11:1248928-1248929|-/C|frameshift_variant;MUC5B|p.S4017Lfs*56|1|0.22|ENSG00000117983|chr11:1248928-1248929|-/C|frameshift_variant;MUC5B|p.T4706Pfs*4|2|0.37|ENSG00000117983|chr11:1250996-1250996|A/-|frameshift_variant;MUC5B|p.T4706Pfs*4|2|0.37|ENSG00000117983|chr11:1250996-1250996|A/-|frameshift_variant	71.29570347882199	0.10120983364817086	2				NaN	NaN	0	NaN	11604	5013	16618
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16694	44.586	NaN	828.95	30	0	215.66	0.142	+			31594	QLTGPVMPV	9	26	471.25952611278063	940.5044992923613	2	471.25994873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QLTGPVMPV_	ENSG00000167526|ENST00000311528|RPL13;ENST00000399461.8_1_16:89627605-89629447:+|nuORF;ENST00000484610.5_1_16:89627907-89629447:+|nuORF;ENST00000570149.1_1_16:89628679-89629447:+|nuORF;nc|ENSG00000167526|P26373-2|RPL13	24.20275056022122	0.577060078256802	2				NaN	NaN	0	NaN	11625	5067	16693
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17409	47.458	NaN	1352.8	30	0	179.37	0.141	+			42478	TANALALAM	9	38	438.23638324877226	NaN	0	438.23626708984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TANALALAM_	ENSG00000142507|ENST00000270586|PSMB6;ENST00000575643.1_1_17:4701246-4701714:+|nuORF	99.37495909608758	0.022697614825424036	2				NaN	NaN	0	NaN	11821	5586	17408
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17522	47.983	NaN	2518.5	30	0	618.76	0.14	+			43586	TIGTILIS	8	38	409.2550477655524	816.4955425979048	2	409.2553405761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TIGTILIS_	ENSG00000230301|ENST00000615035|OR5H6;nc|ENSG00000230301|Q8NGV6|OR5H6;OR5H6|p.L271Sfs*18|1|0.22|ENSG00000230301|chr3:98265091-98265091|C/-|frameshift_variant	143.01937276914788	0.26921844304278314	2				NaN	NaN	0	NaN	11835	5685	17521
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	1990	10.464	NaN	2314.9	30	0	707.5	0.215			+	-1	QLNVRCDQ	8	33	344.8347473144531	NaN	0	344.8347473144531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_QLNVRC(Carbamidomethyl (C))DQ_	REV__ENSG00000278318|ENST00000614049|ZNF229;REV__nc|ENSG00000278318|Q9UJW7-2|ZNF229	35.61828744233558	1.7418937515398478	2				NaN	NaN	0	NaN	3	1985	1989
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	1991	10.468	NaN	1685.9	30	0	307.11	0.049	+			28403	NERKRKRWLYW	11	55	817.9523315429688	NaN	0	817.9523315429688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NERKRKRWLYW_	ENSG00000175354|ENST00000309660|PTPN2	0.9081495309045565	0.456735970842152	2				NaN	NaN	0	NaN	4	1985	1989
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2056	10.84	NaN	1220.6	30	0	319.38	0.144	+			19496	KATKSPAKPK	10	41	528.3318303968626	1054.6491078605252	2	528.3314819335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KATKSPAKPK_	ENSG00000184357|ENST00000331442|H1-5	48.18798116849167	0.47369693546262365	2				NaN	NaN	0	NaN	18	2036	2055
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2093	11.016	NaN	1546.5	30	0	408.36	0.142	+			19487	KATGAATPKK	10	41	486.7954789271187	971.5764049210375	2	486.7958679199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KATGAATPKK_	ENSG00000168298|ENST00000304218|H1-4	77.53327743719008	0.21577387331637743	2				NaN	NaN	0	NaN	22	2069	2092
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2101	11.05	NaN	1730.7	30	0	506.75	0.143			+	30585	QAPKVTRLL	9	39	513.3269042684564	1024.6392556037126	2	513.3268432617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QAPKVTRLL_	REV__ENST00000481773.1_1_3:113933257-113952219:+|nuORF	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	24	2075	2100
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2126	11.132	NaN	9159	30	0	3276.2	0.142	+			4511	ATKKPAPEK	9	63	485.2897102667762	968.5648676003524	2	485.29046630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATKKPAPEK_	ENSG00000174444|ENST00000307961|RPL4;ENST00000422486.1_1_3:185135285-185135612:-|nuORF;ENST00000567229.5_1_15:66791747-66793486:-|nuORF	138.06239232086	0.011389075116295402	2				NaN	NaN	0	NaN	37	2087	2125
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2162	11.285	NaN	12616	30	0	4955.4	0.142	+			19211	KAAGAGKVTK	10	61	465.7900757371692	NaN	0	465.78997802734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAAGAGKVTK_	ENSG00000156508|ENST00000309268|EEF1A1;ENST00000359165.5_1_12:19609181-19609565:-|nuORF;ENST00000436459.2_1_9:135895553-135896258:+|nuORF;ENST00000447052.1_1_21:24762753-24763314:+|nuORF;ENST00000547505.2_1_12:44054544-44054901:+|nuORF;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	195.57289506066198	2.166446580381882E-08	2				NaN	NaN	0	NaN	46	2114	2161
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2168	11.304	NaN	1928.3	30	0	628.84	0.143	+			42412	TAKPKAAKPK	10	39	520.3347066732658	1038.6548604133316	2	520.3351440429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAKPKAAKPK_	ENSG00000168298|ENST00000304218|H1-4	58.62960593111931	0.3783037861296717	2				NaN	NaN	0	NaN	49	2117	2167
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2184	11.36	NaN	1763.1	30	0	925.32	0.144				-1	SVCKASNRR	9	29	359.85799547266504	NaN	0	359.858154296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SVC(Carbamidomethyl (C))KASNRR_	ENSG00000130311|ENST00000359866|DDA1	24.519189625965996	0.35377483217337163	2				NaN	NaN	0	NaN	56	2126	2183
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2188	11.377	NaN	4165.7	30	0	1406.1	0.147			+	-1	STMLTYKKKQ	10	33	415.22971932835185	1242.6673285852555	3	415.23052978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_STM(Oxidation (M))LTYKKKQ_	REV__CDH12|p.D644Y|1|0.08|ENSG00000154162|chr5:21752192-21752192|C/A|missense_variant	35.15202426646627	0.5927656479315102	2				NaN	NaN	0	NaN	57	2129	2187
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2204	11.434	NaN	25912	30	0	8688.8	0.214	+			22894	KVMKDAKTK	9	82	350.21079253489745	1047.6105482048924	3	350.2111511230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVMKDAKTK_	ENSG00000198900|ENST00000361337|TOP1	109.43880257439609	0.029570636687953285	2				NaN	NaN	0	NaN	64	2138	2203
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2205	11.437	NaN	1231.3	30	0	243.37	0.034			+	20593	KGACLQCLK	9	27	482.25932328240964	962.5040936316193	2	482.2599792480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KGACLQCLK_	REV__CON__Q0IIK2;REV__CON__Q29443	30.503639358989545	0.5181749237905803	2				NaN	NaN	0	NaN	65	2138	2203
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2223	11.485	NaN	5497.8	30	0	1145.8	0.214				-1	 	0	57	465.2920392457772	928.5695255583544	2	465.29217529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	77	2144	2222
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2224	11.488	NaN	2028.2	30	0	1196.2	0.035			+	11703	FRSRRGPR	8	26	516.3016256518852	NaN	0	516.302490234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FRSRRGPR_	REV__ENST00000505713.1_1_4:106394627-106395207:-|nuORF	25.450171626174864	1.7418937515398478	2				NaN	NaN	0	NaN	78	2144	2222
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2245	11.54	NaN	4009.5	30	0	933.54	0.214			+	11545	FPHLVGVLA	9	53	476.78480586603536	NaN	0	476.7853698730469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FPHLVGVLA_	REV__nc|nan|Q32M92-2|C15orf32;REV__nc|nan|Q32M92|C15orf32	29.841539824830324	0.32690339240668626	2				NaN	NaN	0	NaN	93	2150	2244
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2246	11.544	NaN	3089.4	30	0	604.67	0.035	+			420	AATKKPAPEK	10	60	520.8083292084557	1039.6021054837113	2	520.8091430664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AATKKPAPEK_	ENSG00000174444|ENST00000307961|RPL4;ENST00000422486.1_1_3:185135285-185135612:-|nuORF;ENST00000567229.5_1_15:66791747-66793486:-|nuORF	92.23892857375223	0.11825556496531454	2				NaN	NaN	0	NaN	94	2150	2244
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2257	11.569	NaN	50291	30	0	34263	0.143	+			4842	ATPKKSIKK	9	55	500.8289012703728	999.6432496075456	2	500.8291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATPKKSIKK_	ENSG00000124575|ENST00000244534|H1-3	131.115847015877	0.014647977962315902	2				NaN	NaN	0	NaN	102	2153	2256
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2284	11.642	NaN	1201.7	30	0	218.01	0.214	+			19242	KAAVTPGKK	9	33	450.28702501258044	898.5594970919609	2	450.2873229980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAAVTPGKK_	ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232323706-232327997:-|nuORF	82.7504851949679	0.08565546331141553	2				NaN	NaN	0	NaN	120	2162	2283
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2285	11.645	NaN	12821	30	0	2995.9	0.106	+			42884	TEHAKRKTV	9	50	357.20827835754795	1068.603005672844	3	357.2087707519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEHAKRKTV_	ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000275663|ENST00000611444|H4C7;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2	29.14955571784316	0.5308295550522326	2				NaN	NaN	0	NaN	121	2162	2283
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2286	11.647	NaN	1312.3	30	0	241.98	0.106	+			22645	KTVTQSLKK	9	38	516.8254967900116	NaN	0	516.8253784179688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KTVTQSLKK_	ENSG00000164761|ENST00000297350|TNFRSF11B	51.19269402634007	0.19847346126499396	2				NaN	NaN	0	NaN	122	2162	2283
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2287	11.649	NaN	871.35	30	0	218.69	0.034			+	19126	IYLTVQVQ	8	37	482.277099609375	NaN	0	482.277099609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IYLTVQVQ_	REV__ENST00000483260.5_1_1:110943891-110943993:-|nuORF	44.116797842482775	1.7418937515398478	2				NaN	NaN	0	NaN	123	2162	2283
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2298	11.674	NaN	5150.3	30	0	1362.3	0.214	+			14735	GTKAQVERK	9	61	339.53286319621446	1015.5767601888434	3	339.5327453613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTKAQVERK_	ENSG00000158769|ENST00000368026|F11R;ENST00000335772.3_1_1:160972398-160990872:-|nuORF;ENST00000602966.1_1_1:160970859-160990872:-|nuORF;nc|ENSG00000158769|Q9Y624-2|F11R	54.722347961057174	0.257609425301511	2				NaN	NaN	0	NaN	131	2165	2297
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2299	11.678	NaN	96.216	30	0	18.271	0.106	+			51437	YVDHVEKR	8	9	523.2733764648438	NaN	0	523.2733764648438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YVDHVEKR_	ENSG00000078747|ENST00000374864|ITCH;ITCH-PIGU|1|fusion;ITCH-PIGU|2|fusion;ITCH-PIGU|3|fusion;nc|ENSG00000289720|Q96J02-3|ITCH;nc|ENSG00000289720|Q96J02|ITCH	16.473147378115264	1.7418937515398478	2				NaN	NaN	0	NaN	132	2165	2297
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2300	11.68	NaN	1490.9	30	0	125.55	0.037	+			34257	RTHEHVSEK	9	38	374.859619140625	NaN	0	374.859619140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RTHEHVSEK_	CAST|p.E474Kfs*10|1|0.39|ENSG00000153113|chr5:96754695-96754695|A/-|frameshift_variant;ENSG00000153113|ENST00000675179|CAST;ENST00000507487.5_1_5:95998126-96062463:+|nuORF;ENST00000515160.5_1_5:95998126-96031662:+|nuORF;nc|ENSG00000153113|P20810-10|CAST;nc|ENSG00000153113|P20810-5|CAST;nc|ENSG00000153113|P20810-7|CAST;nc|ENSG00000153113|P20810-9|CAST	42.33807565288922	0.25949540651090086	2				NaN	NaN	0	NaN	133	2165	2297
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2311	11.705	NaN	1114.5	30	0	129.79	0.142	+			19439	KAQTKAPPK	9	40	484.79775605626975	967.5809591793395	2	484.79815673828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAQTKAPPK_	ENSG00000166197|ENST00000605788|NOLC1;nc|ENSG00000166197|Q14978-2|NOLC1;nc|ENSG00000166197|Q14978-3|NOLC1	47.657333605630114	0.33044192980041115	2				NaN	NaN	0	NaN	141	2168	2310
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2322	11.732	NaN	6783.3	30	0	1567.5	0.214	+			4105	ATDTRVRQK	9	36	358.87191530590997	1073.59391651793	3	358.8722229003906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATDTRVRQK_	ENSG00000168116|ENST00000370733|KIAA1586;nc|ENSG00000168116|Q9HCI6-2|KIAA1586	58.78195531508484	0.22376836668196862	2				NaN	NaN	0	NaN	149	2171	2321
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2323	11.736	NaN	1322.6	30	0	777.26	0.106	+			25692	LRKLATTPT	9	30	500.8122863769531	NaN	0	500.8122863769531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LRKLATTPT_	ENST00000434005.1_1_7:22551057-22551540:-|nuORF;ENST00000491404.1_1_6:74228710-74228824:-|nuORF	15.641811463095205	0.38404136392510424	2				NaN	NaN	0	NaN	150	2171	2321
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2324	11.738	NaN	644.85	30	0	192.14	0.034	+			13943	GRVTQASVK	9	24	473.2774350610628	NaN	0	473.27752685546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GRVTQASVK_	ENSG00000078246|ENST00000448120|TULP3;ENSG00000112041|ENST00000229771|TULP1;ENSG00000166402|ENST00000299506|TUB;nc|ENSG00000078246|O75386-2|TULP3;nc|ENSG00000112041|O00294-2|TULP1;nc|ENSG00000166402|P50607-2|TUB	23.04248740728303	0.3589936788096251	2				NaN	NaN	0	NaN	151	2171	2321
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2335	11.763	NaN	1299.9	30	0	233.21	0.214			+	34233	RTGGFLQLLI	10	41	559.3393034430231	NaN	0	559.3397827148438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTGGFLQLLI_	REV__ENSG00000104738|ENST00000649973|MCM4;REV__MCM4|p.T629Qfs*18|2|0.31|ENSG00000104738|chr8:47971419-47971419|A/-|frameshift_variant	64.20726635412375	0.1999210135493042	2				NaN	NaN	0	NaN	159	2174	2334
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2336	11.767	NaN	562.49	30	0	295.06	0.106				-1	AAMPCFVII	9	15	341.1784463357852	NaN	0	341.178466796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_AAMPC(Carbamidomethyl (C))FVII_	ENSG00000204516|ENST00000252229|MICB;nc|ENSG00000204516|Q29980-2|MICB	29.14955571784316	0.3303970763161698	2				NaN	NaN	0	NaN	160	2174	2334
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2337	11.769	NaN	1066.7	30	0	190.46	0.036			+	9026	EGDSRFLRK	9	41	554.296875	NaN	0	554.296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EGDSRFLRK_	REV__ENST00000534376.1_1_6:138892799-138893132:-|nuORF;REV__nc|ENSG00000135540|Q5SYE7|NHSL1	78.26377905018397	0.07733306720594871	2				NaN	NaN	0	NaN	161	2174	2334
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2343	11.785	NaN	5601.8	30	0	1949.2	0.142				-1	 	0	55	474.27908071805786	946.5436085029157	2	474.27813720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	164	2177	2342
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2354	11.812	NaN	852.75	30	0	377.83	0.142	+			38850	SSNNSLIVK	9	32	481.2683862093463	960.5222194854927	2	481.268798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSNNSLIVK_	ENSG00000169851|ENST00000695919|PCDH7;nc|ENSG00000169851|O60245-2|PCDH7;nc|ENSG00000169851|O60245|PCDH7;PCDH7|p.D918Ifs*209|1|0.36|ENSG00000169851|chr4:30724168-30724168|A/-|frameshift_variant;PCDH7|p.H835Tfs*53|1|0.16|ENSG00000169851|chr4:31142537-31142537|C/-|frameshift_variant;PCDH7|p.K1017Nfs*110|1|0.13|ENSG00000169851|chr4:30724467-30724467|A/-|frameshift_variant;PCDH7|p.V732Cfs*4|1|0.45|ENSG00000169851|chr4:30723610-30723611|-/T|frameshift_variant	30.317721548370564	0.5199124245378496	2				NaN	NaN	0	NaN	172	2180	2353
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2365	11.838	NaN	286970	30	0	76528	0.166				-1	 	0	87	501.82400471734826	1001.6334565014965	2	501.8244934082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	180	2183	2364
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2366	11.841	NaN	9380.4	30	0	2979.2	0.106			+	31628	QMGLLQHEL	9	57	534.7799271609946	1067.545301388789	2	534.7814331054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QMGLLQHEL_	REV__ENST00000393860.7_1_17:40283628-40283751:-|nuORF	87.75429964447693	0.0711966946989736	2				NaN	NaN	0	NaN	181	2183	2364
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2367	11.843	NaN	3066.6	30	0	1705.8	0.106	+			21142	KKTAHNSEA	9	26	493.2569210496639	984.4992891661278	2	493.2572021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KKTAHNSEA_	ENSG00000156531|ENST00000370803|PHF6;nc|ENSG00000156531|Q8IWS0-2|PHF6;nc|ENSG00000156531|Q8IWS0-5|PHF6	25.57405402267927	0.5642445186134241	2				NaN	NaN	0	NaN	182	2183	2364
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2368	11.845	NaN	4023.7	30	0	791.72	0.106	+			38683	SSKDAIKK	8	50	438.760570819774	875.506588706348	2	438.7607116699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSKDAIKK_	DSTN|p.Y117H|1|0.26|ENSG00000125868|chr20:17604592-17604592|T/C|missense_variant;ENSG00000125868|ENST00000246069|DSTN;ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000400899.2_1_1:11051144-11051557:-|nuORF;ENST00000530945.1_1_11:65623104-65623215:-|nuORF;ENST00000602547.1_1_12:6994092-6994545:+|nuORF;nc|ENSG00000125868|P60981-2|DSTN;nc|ENSG00000165410|Q9Y281-3|CFL2	88.17693792209575	0.28298906586229006	2				NaN	NaN	0	NaN	183	2183	2364
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2369	11.847	NaN	5280.8	30	0	1284.7	0.106			+	22212	KSTVVKAG	8	56	395.2450411422034	788.4755293512068	2	395.24517822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KSTVVKAG_	REV__ENST00000569494.5_3_16:57679871-57684200:+|nuORF	102.7733458925114	0.2491487235419157	2				NaN	NaN	0	NaN	184	2183	2364
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2370	11.848	NaN	4519.7	30	0	1363.4	0.106	+			31272	QHSSRRAK	8	52	485.2702223499886	968.5258917667772	2	485.7719421386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QHSSRRAK_	ENSG00000176444|ENST00000368361|CLK2;ENST00000497188.1_1_1:155238472-155238670:-|nuORF	63.30626980617807	0.4690498839812213	2				NaN	NaN	0	NaN	185	2183	2364
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2371	11.85	NaN	4596.4	30	0	1812.1	0.035			+	33525	RKVNLLNPA	9	49	512.81555543217	NaN	0	512.8159790039062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RKVNLLNPA_	REV__ENSG00000165525|ENST00000298310|NEMF;REV__nc|ENSG00000165525|O60524-2|NEMF;REV__nc|ENSG00000165525|O60524-3|NEMF;REV__nc|ENSG00000165525|O60524-4|NEMF;REV__nc|ENSG00000165525|O60524-5|NEMF	37.15910966729921	0.2899585034171616	2				NaN	NaN	0	NaN	186	2183	2364
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2393	11.902	NaN	1016.1	30	0	265.68	0.142	+			9975	ERGLTGIKG	9	35	465.77398093669774	NaN	0	465.7739562988281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ERGLTGIKG_	ENSG00000187955|ENST00000297848|COL14A1;nc|ENSG00000187955|Q05707-2|COL14A1;nc|ENSG00000187955|Q05707-3|COL14A1	31.529811441608018	0.3183796599642538	2				NaN	NaN	0	NaN	202	2189	2392
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2405	11.93	NaN	1490.9	30	0	286.98	0.214	+			20388	KESVKKEAA	9	45	495.2847933384458	NaN	0	495.2846984863281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KESVKKEAA_	ENSG00000140279|ENST00000389039|DUOX2;ENST00000558383.1_1_15:45393877-45400429:-|nuORF;nc|ENSG00000140279|Q9NRD8|DUOX2	58.22992032128504	0.15686832049467786	2				NaN	NaN	0	NaN	211	2192	2404
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2406	11.934	NaN	1615.8	30	0	489.37	0.106	+			22411	KTKGPLKQK	9	47	514.3344624890483	NaN	0	514.3344116210938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTKGPLKQK_	ENSG00000164611|ENST00000352433|PTTG1;ENST00000519287.1_1_5:159849240-159855685:+|nuORF;ENST00000523659.5_1_5:159849319-159851384:+|nuORF;ENST00000524244.5_1_5:159849319-159849927:+|nuORF	90.60085204095205	0.040385177724871185	2				NaN	NaN	0	NaN	212	2192	2404
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2407	11.935	NaN	2989.7	30	0	1174.3	0.106			+	27755	MQVNVKGCGNV	11	38	383.52313232421875	NaN	0	383.52313232421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MQVNVKGCGNV_	REV__UBR5|p.E2684K|1|0.32|ENSG00000104517|chr8:102259036-102259036|C/T|missense_variant	25.57405402267927	0.45144328854727944	2				NaN	NaN	0	NaN	213	2192	2404
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2408	11.937	NaN	198.78	30	0	43.847	0.106	+			1733	AHLINYGTK	9	11	508.77850341796875	NaN	0	508.77850341796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AHLINYGTK_	ANK1|p.L540Sfs*81|1|0.35|ENSG00000029534|chr8:41715060-41715061|-/G|frameshift_variant;ENSG00000029534|ENST00000289734|ANK1;KIAA0146-ANK1|1|fusion;KIAA0146-ANK1|2|fusion;KIAA0146-ANK1|3|fusion;KIAA0146-ANK1|4|fusion;KIAA0146-ANK1|5|fusion;nc|ENSG00000029534|P16157-10|ANK1;nc|ENSG00000029534|P16157-11|ANK1;nc|ENSG00000029534|P16157-12|ANK1;nc|ENSG00000029534|P16157-13|ANK1;nc|ENSG00000029534|P16157-14|ANK1;nc|ENSG00000029534|P16157-15|ANK1;nc|ENSG00000029534|P16157-16|ANK1;nc|ENSG00000029534|P16157-2|ANK1;nc|ENSG00000029534|P16157-21|ANK1;nc|ENSG00000029534|P16157-4|ANK1;nc|ENSG00000029534|P16157-5|ANK1;nc|ENSG00000029534|P16157-6|ANK1;nc|ENSG00000029534|P16157-7|ANK1;nc|ENSG00000029534|P16157-8|ANK1;nc|ENSG00000029534|P16157-9|ANK1;nc|ENSG00000029534|P16157|ANK1	10.865556482863946	0.40020666175442315	2				NaN	NaN	0	NaN	214	2192	2404
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2409	11.939	NaN	237.68	30	0	52.363	0.106			+	-1	CLGLAILEQ	9	19	339.5205993652344	NaN	0	339.5205993652344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_C(Carbamidomethyl (C))LGLAILEQ_	REV__ENSG00000170615|ENST00000306312|SLC26A5;REV__nc|ENSG00000170615|P58743-2|SLC26A5;REV__nc|ENSG00000170615|P58743-3|SLC26A5;REV__nc|ENSG00000170615|P58743-5|SLC26A5;REV__nc|ENSG00000170615|P58743-6|SLC26A5;REV__SLC26A5|p.F693Lfs*19|1|0.36|ENSG00000170615|chr7:103374555-103374555|A/-|frameshift_variant;REV__SLC26A5|p.I619Nfs*9|2|0.3|ENSG00000170615|chr7:103377731-103377732|-/G|frameshift_variant	14.864876125193954	0.3866709117995958	2				NaN	NaN	0	NaN	215	2192	2404
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2410	11.941	NaN	4379.5	30	0	1415.2	0.037			+	20544	KFLNPRVVQ	9	34	367.5585776406268	NaN	0	367.5586242675781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KFLNPRVVQ_	REV__ENST00000281146.9_1_4:130014860-130014995:+|nuORF	32.81241826257853	0.3119040447479903	2				NaN	NaN	0	NaN	216	2192	2404
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2411	11.941	NaN	118.81	30	0	56.085	0.14			+	41208	SVLDTVEVL	9	7	325.5174578479381	NaN	0	325.5174560546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVLDTVEVL_	REV__ENSG00000181291|ENST00000631683|TMEM132E	5.55782384252955	0.4072763090772754	2				NaN	NaN	0	NaN	217	2192	2404
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2422	11.968	NaN	1179.6	30	0	305.35	0.143	+			33948	RSASPNFNT	9	43	497.2421142198222	992.4696755064444	2	497.2426452636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RSASPNFNT_	ENSG00000133401|ENST00000438447|PDZD2;ENST00000502489.5_1_5:31983264-32077762:+|nuORF;nc|ENSG00000133401|O15018-2|PDZD2;PDZD2|p.D2774Rfs*7|1|0.29|ENSG00000133401|chr5:32101201-32101202|-/G|frameshift_variant;PDZD2|p.E2629Kfs*37|1|0.23|ENSG00000133401|chr5:32097314-32097314|A/-|frameshift_variant;PDZD2|p.K1843Rfs*31|3|0.26|ENSG00000133401|chr5:32088970-32088970|A/-|frameshift_variant;PDZD2|p.Q1108Sfs*17|1|0.35|ENSG00000133401|chr5:32074423-32074423|C/-|frameshift_variant;PDZD2|p.S2770Gfs*12|1|0.04|ENSG00000133401|chr5:32101193-32101194|-/GGGT|frameshift_variant;PDZD2|p.V1845Rfs*6|2|0.38|ENSG00000133401|chr5:32088969-32088970|-/A|frameshift_variant	54.722347961057174	0.257609425301511	2				NaN	NaN	0	NaN	225	2195	2421
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2433	11.996	NaN	1588.8	30	0	576.79	0.214			+	38323	SRGAVAILL	9	41	450.2867690604362	898.5589851876724	2	450.2870788574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SRGAVAILL_	REV__ENST00000367874.4_1_1:166845454-166845523:-|nuORF	65.80317337860623	0.1652391959156183	2				NaN	NaN	0	NaN	233	2198	2432
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2434	11.999	NaN	3136.3	30	0	1202.9	0.106	+			33296	RGPPKDKK	8	42	463.2819049811926	924.5492570291852	2	463.2821350097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RGPPKDKK_	ENSG00000160469|ENST00000309383|BRSK1;nc|ENSG00000160469|Q8TDC3-2|BRSK1	60.97194046774394	0.49215940876911696	2				NaN	NaN	0	NaN	234	2198	2432
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2435	12.001	NaN	2265.7	30	0	337.58	0.106			+	22109	KSNHEKRVV	9	40	548.8139169238278	1095.6132809144556	2	548.8155517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KSNHEKRVV_	REV__ENSG00000068654|ENST00000263857|POLR1A;REV__ENST00000486964.5_1_2:86305209-86332944:-|nuORF	54.776311868738084	0.25715957988447635	2				NaN	NaN	0	NaN	235	2198	2432
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2436	12.003	NaN	812.64	30	0	170.84	0.036			+	-1	SSTHICKNE	9	21	359.1647644042969	NaN	0	359.1647644042969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_SSTHIC(Carbamidomethyl (C))KNE_	REV__JADE1|p.K819N|2|0.2|ENSG00000077684|chr4:128872190-128872190|G/T|missense_variant	27.882242232435846	0.3367954786602879	2				NaN	NaN	0	NaN	236	2198	2432
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2445	12.025	NaN	1187.9	30	0	462.84	0.143			+	21873	KRMGETLPK	9	28	530.3043697267559	1058.5941865203117	2	530.3052978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KRMGETLPK_	REV__ENSG00000148399|ENST00000277540|DPH7;REV__ENST00000467243.5_1_9:140449693-140459078:-|nuORF;REV__ENST00000479650.5_1_9:140449693-140459532:-|nuORF	17.468008924990375	0.6112419832031292	2				NaN	NaN	0	NaN	242	2201	2444
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2456	12.051	NaN	1047.1	30	0	194.01	0.214	+			20048	KEKDKDSKL	9	35	545.8081709854982	1089.6017890377964	2	545.8093872070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEKDKDSKL_	ENSG00000143799|ENST00000366794|PARP1;PARP1|p.E360Rfs*29|1|0.22|ENSG00000143799|chr1:226383118-226383119|-/G|frameshift_variant;PARP1|p.K352Nfs*29|1|0.12|ENSG00000143799|chr1:226383139-226383139|T/-|frameshift_variant;PARP1|p.S507Afs*17|2|0.28|ENSG00000143799|chr1:226379946-226379946|T/-|frameshift_variant;PARP1|p.T799Lfs*41|1|0.39|ENSG00000143799|chr1:226367491-226367491|T/-|frameshift_variant	54.722347961057174	0.257609425301511	2				NaN	NaN	0	NaN	250	2204	2455
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2457	12.054	NaN	2289.8	30	0	412.61	0.106	+			20968	KKEIKNVP	8	47	478.2999514486176	954.5853499640352	2	478.30035400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KKEIKNVP_	tr|U7SLD7|U7SLD7_FUSNUHelicaseSNFOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01975PE=4SV=1	63.30626980617807	0.4690498839812213	2				NaN	NaN	0	NaN	251	2204	2455
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2458	12.056	NaN	687.47	30	0	97.844	0.036			+	-1	QNSKMRKR	8	29	532.29443359375	NaN	0	532.29443359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_QNSKM(Oxidation (M))RKR_	REV__ENST00000297857.3_1_8:124267519-124267567:-|nuORF	24.20275056022122	1.7418937515398478	2				NaN	NaN	0	NaN	252	2204	2455
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2478	12.105	NaN	4965.6	30	0	1761.4	0.214	+			14647	GTHKGAIEK	9	47	470.7638574828518	939.5131620325036	2	470.7638244628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTHKGAIEK_	ENSG00000130340|ENST00000392185|SNX9	63.53385203322761	0.18415635464017938	2				NaN	NaN	0	NaN	266	2210	2477
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2479	12.108	NaN	1119.2	30	0	417.05	0.042			+	33521	RKTEVLRRRQQ	11	37	490.63066175631377	1468.8701558691414	3	490.6309509277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RKTEVLRRRQQ_	REV__ENSG00000116852|ENST00000461742|KIF21B;REV__nc|ENSG00000116852|O75037-2|KIF21B;REV__nc|ENSG00000116852|O75037-3|KIF21B;REV__nc|ENSG00000116852|O75037|KIF21B	14.086013023434994	0.8045329596154472	2				NaN	NaN	0	NaN	267	2210	2477
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2490	12.134	NaN	16737	30	0	5587.6	0.214				-1	 	0	71	474.27908071805786	946.5436085029157	2	474.2793273925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	275	2213	2489
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2491	12.138	NaN	2763.3	30	0	624.12	0.106	+			20096	KEKKEEEKM	9	61	589.8082835844374	NaN	0	589.8082275390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEKKEEEKM_	ENSG00000173692|ENST00000308696|PSMD1;nc|ENSG00000173692|Q99460-2|PSMD1	167.93327368760816	0.012332864707765337	2				NaN	NaN	0	NaN	276	2213	2489
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2492	12.139	NaN	9070.7	30	0	1143.5	0.106			+	21429	KMYSKAQK	8	64	492.2720382880662	982.5295236429324	2	492.2727355957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KMYSKAQK_	REV__ENSG00000168096|ENST00000304283|ANKS3;REV__ENST00000590730.5_1_16:4750718-4779992:-|nuORF;REV__ENST00000590803.5_1_16:4747031-4751860:-|nuORF;REV__ENST00000592840.1_1_16:4749591-4751599:-|nuORF;REV__nc|ENSG00000168096|Q6ZW76-2|ANKS3	116.90359126533652	0.23898233959989007	2				NaN	NaN	0	NaN	277	2213	2489
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2493	12.141	NaN	3836.8	30	0	1508.2	0.106				-1	EMAGKEKEKI	10	53	393.5405386339863	1177.5997865021588	3	393.5409851074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_EM(Oxidation (M))AGKEKEKI_	MSN|p.E334G|1|0.59|ENSG00000147065|chrX:65736836-65736836|A/G|missense_variant	65.15724298150197	0.31893571707528906	2				NaN	NaN	0	NaN	278	2213	2489
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2494	12.143	NaN	9669	30	0	1593.8	0.106	+			15050	GTNRTTVNK	9	69	495.7696741799065	989.524795426613	2	495.7696838378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTNRTTVNK_	ENSG00000225921|ENST00000451315|NOL7;NOL7|p.K238Nfs*16|1|0.31|ENSG00000225921|chr6:13620760-13620760|A/-|frameshift_variant;NOL7|p.N240Mfs*14|1|0.23|ENSG00000225921|chr6:13620769-13620769|A/-|frameshift_variant	93.5975768576971	0.05472259948179787	2				NaN	NaN	0	NaN	279	2213	2489
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2495	12.145	NaN	855.72	30	0	358.03	0.036	+			4721	ATMEHHANR	9	32	533.746826171875	NaN	0	533.746826171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATMEHHANR_	ENSG00000152256|ENST00000282077|PDK1;nc|ENSG00000152256|Q15118-2|PDK1	44.377184641726394	0.24544280798894275	2				NaN	NaN	0	NaN	280	2213	2489
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2506	12.17	NaN	7835.4	30	0	1246.7	0.214			+	44368	TSKQAKKRE	9	60	359.2118411619357	NaN	0	359.2118835449219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSKQAKKRE_	REV__ENSG00000152582|ENST00000356031|SPEF2;REV__ENST00000503074.1_1_5:35700583-35709228:+|nuORF;REV__nc|ENSG00000152582|Q9C093-2|SPEF2;REV__SPEF2|p.I1348Nfs*12|1|0.34|ENSG00000152582|chr5:35773981-35773982|-/A|frameshift_variant;REV__SPEF2|p.N1040Tfs*10|1|0.32|ENSG00000152582|chr5:35739972-35739972|A/-|frameshift_variant;REV__SPEF2|p.T1227Qfs*5|1|0.23|ENSG00000152582|chr5:35763576-35763576|A/-|frameshift_variant	35.61828744233558	0.29773779453147337	2				NaN	NaN	0	NaN	288	2216	2505
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2507	12.174	NaN	853.21	30	0	451.51	0.106			+	20844	KIKDSAKK	8	25	459.29229736328125	NaN	0	459.29229736328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KIKDSAKK_	REV__tr|U7T0G5|U7T0G5_FUSNUGlucose-6-phosphateisomeraseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=pgiPE=3SV=1	35.61828744233558	1.7418937515398478	2				NaN	NaN	0	NaN	289	2216	2505
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2508	12.176	NaN	3709.1	30	0	496.32	0.106			+	50350	WVKGWWPSA	9	56	558.7851576858206	1115.5557624384412	2	558.7864379882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_WVKGWWPSA_	REV__ENST00000579408.5_2_18:47018090-47018201:-|nuORF	56.72105179125745	0.24094814563026265	2				NaN	NaN	0	NaN	290	2216	2505
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2509	12.178	NaN	1945.3	30	0	358.06	0.106	+			19623	KDIIEPLTI	9	36	347.8770446777344	NaN	0	347.8770446777344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KDIIEPLTI_	tr|U7SQT4|U7SQT4_FUSNUtypeIsite-specificdeoxyribonucleaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01572PE=3SV=1	23.52269567125451	0.3573684076213556	2				NaN	NaN	0	NaN	291	2216	2505
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2510	12.179	NaN	601.43	30	0	167.12	0.037	+			1607	AGLRSPCPGQH	11	22	374.8533630371094	NaN	0	374.8533630371094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AGLRSPCPGQH_	ENSG00000167895|ENST00000318430|TMC8;ENST00000591144.1_1_17:76134504-76137190:+|nuORF;nc|ENSG00000167895|Q8IU68-2|TMC8	20.030474535948922	0.456735970842152	2				NaN	NaN	0	NaN	292	2216	2505
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2521	12.205	NaN	2669.3	30	0	515.45	0.214	+			4100	ATDRSHYAK	9	46	524.7618408203125	NaN	0	524.7618408203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATDRSHYAK_	ENSG00000120265|ENST00000464889|PCMT1;nc|ENSG00000120265|P22061-2|PCMT1	51.19269402634007	0.19847346126499396	2				NaN	NaN	0	NaN	300	2219	2520
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2522	12.208	NaN	5953.3	30	0	1182	0.106				-1	 	0	54	501.82400471734826	1001.6334565014965	2	501.823974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	301	2219	2520
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2523	12.21	NaN	1220	30	0	146.63	0.036			+	4803	ATNSMRPKQ	9	32	350.1771599173578	NaN	0	350.17706298828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_ATNSM(Oxidation (M))RPKQ_	REV__ENSG00000167306|ENST00000285039|MYO5B	42.396135135203025	0.2590952873412954	2				NaN	NaN	0	NaN	302	2219	2520
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2534	12.236	NaN	481.09	30	0	73.193	0.144	+			32015	QRLRGHLPL	9	24	545.3348388671875	NaN	0	545.3348388671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QRLRGHLPL_	ENST00000278559.7_1_11:76796081-76823747:+|nuORF;ENST00000456580.6_1_11:76796081-76823747:+|nuORF	12.959181472943097	0.3931207604263714	2				NaN	NaN	0	NaN	310	2222	2533
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2545	12.263	NaN	1399.9	30	0	466.6	0.214			+	20643	KGHGPGPQ	8	36	389.2033084937473	776.3920640542946	2	389.2037353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KGHGPGPQ_	REV__ENSG00000186111|ENST00000335312|PIP5K1C;REV__ENST00000587482.1_1_19:3649915-3700388:-|nuORF;REV__nc|ENSG00000186111|O60331-2|PIP5K1C;REV__nc|ENSG00000186111|O60331-3|PIP5K1C;REV__nc|ENSG00000186111|O60331-4|PIP5K1C;REV__PIP5K1C|p.A494Gfs*44|1|0.16|ENSG00000186111|chr19:3644116-3644117|-/C|frameshift_variant	40.5726180659479	0.6527593143185008	2				NaN	NaN	0	NaN	318	2225	2544
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2546	12.267	NaN	663.12	30	0	340.85	0.036			+	17711	IEMRFIKQ	8	25	532.8009966122338	NaN	0	532.8009033203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IEMRFIKQ_	REV__ENSG00000087008|ENST00000356406|ACOX3;REV__ENST00000510365.5_1_4:8376552-8417570:-|nuORF;REV__nc|ENSG00000087008|O15254-2|ACOX3	44.116797842482775	1.7418937515398478	2				NaN	NaN	0	NaN	319	2225	2544
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2568	12.319	NaN	2882.8	30	0	699.76	0.143	+			1592	AGKVRGQTPK	10	49	521.3117287885187	1040.6089046438374	2	521.31298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AGKVRGQTPK_	ENSG00000149806|ENST00000529639|FAU;ENST00000531357.1_1_11:64888296-64888581:-|nuORF	112.2953585152457	0.0411829880542106	2				NaN	NaN	0	NaN	335	2231	2567
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2579	12.346	NaN	3836.1	30	0	978.9	0.143	+			5882	AVKPKAAKPK	10	45	519.3452632496067	1036.6759735660132	2	519.3458862304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVKPKAAKPK_	ENSG00000168298|ENST00000304218|H1-4;ENSG00000184357|ENST00000331442|H1-5;ENSG00000187837|ENST00000343677|H1-2	63.42647028704847	0.33467688528802414	2				NaN	NaN	0	NaN	343	2234	2578
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2590	12.374	NaN	6215.8	30	0	1752.5	0.214			+	-1	DGAVMGVTKIF	11	41	385.20322939856464	1152.587858795894	3	385.20330810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_DGAVM(Oxidation (M))GVTKIF_	REV__ENSG00000131730|ENST00000254035|CKMT2;REV__ENSG00000223572|ENST00000413453|CKMT1A;REV__ENSG00000237289|ENST00000441322|CKMT1B;REV__ENST00000505135.1_1_5:80548598-80553554:+|nuORF;REV__nc|ENSG00000237289|P12532-2|CKMT1A	23.37791116691581	0.7445759747191538	2				NaN	NaN	0	NaN	351	2237	2589
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2591	12.377	NaN	6099	30	0	5043.7	0.106			+	370	AARGKGKP	8	26	392.74265407805814	783.4707552229163	2	392.7429504394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AARGKGKP_	REV__E2F3|p.T177Nfs*4|1|0.31|ENSG00000112242|chr6:20481223-20481224|-/A|frameshift_variant;REV__E2F3|p.T177Rfs*18|1|0.28|ENSG00000112242|chr6:20481224-20481224|A/-|frameshift_variant;REV__ENSG00000112242|ENST00000346618|E2F3;REV__nc|ENSG00000112242|O00716-2|E2F3	4.6817480819748125	0.7764044737779935	2				NaN	NaN	0	NaN	352	2237	2589
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2592	12.379	NaN	415.17	30	0	145.51	0.035			+	33852	RRGPGQRQG	9	21	506.2828369140625	NaN	0	506.2828369140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RRGPGQRQG_	REV__ENST00000436101.1_1_20:61146672-61147090:-|nuORF	17.364965105453717	0.37820932774828947	2				NaN	NaN	0	NaN	353	2237	2589
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2604	12.405	NaN	1178.4	30	0	352.76	0.142			+	22579	KTSTKVKQ	8	37	460.2828790194953	NaN	0	460.2828369140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTSTKVKQ_	REV__ENSG00000133858|ENST00000378743|ZFC3H1;REV__nc|ENSG00000133858|O60293-2|ZFC3H1;REV__ZFC3H1|p.E1034Dfs*26|1|0.04|ENSG00000133858|chr12:71632230-71632231|-/AATAAAAATACTG|frameshift_variant;REV__ZFC3H1|p.L1048*|1|0.18|ENSG00000133858|chr12:71632189-71632189|A/-|frameshift_variant;REV__ZFC3H1|p.L1693Ffs*10|1|0.1|ENSG00000133858|chr12:71619380-71619381|-/A|frameshift_variant;REV__ZFC3H1|p.V423Sfs*2|1|0.32|ENSG00000133858|chr12:71644889-71644890|-/T|frameshift_variant	63.30626980617807	1.7418937515398478	2				NaN	NaN	0	NaN	362	2240	2603
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2615	12.432	NaN	1324.3	30	0	135.67	0.214				-1	MAPAGCCCCCC	11	37	431.78383818244686	NaN	0	431.78369140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term),3 Carbamidomethyl (C),Oxidation (M)	_(Acetyl (Protein N-term))M(Oxidation (M))APAGCCC(Carbamidomethyl (C))C(Carbamidomethyl (C))CC(Carbamidomethyl (C))_	ENSG00000143643|ENST00000366661|TTC13;nc|ENSG00000143643|Q8NBP0-2|TTC13;TTC13|p.R627Nfs*8|1|0.19|ENSG00000143643|chr1:230921438-230921439|TC/-|frameshift_variant	3.61906645146314	0.456735970842152	2				NaN	NaN	0	NaN	370	2243	2614
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2616	12.436	NaN	2298.6	30	0	457.51	0.031			+	24551	LGLRTGVDFI	10	42	364.21257012319387	NaN	0	364.2122802734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LGLRTGVDFI_	REV__CCNK|p.C113Mfs*2|1|0.18|ENSG00000090061|chr14:99495547-99495548|-/A|frameshift_variant;REV__CCNK|p.K112Nfs*13|2|0.25|ENSG00000090061|chr14:99495548-99495548|A/-|frameshift_variant;REV__CCNK|p.P522Hfs*58|1|0.12|ENSG00000090061|chr14:99510600-99510600|C/-|frameshift_variant;REV__ENSG00000090061|ENST00000389879|CCNK;REV__ENST00000553636.1_1_14:99959014-99959269:+|nuORF;REV__ENST00000556641.5_1_14:99959014-99967243:+|nuORF;REV__ENST00000557165.5_1_14:99959014-99968584:+|nuORF;REV__nc|ENSG00000090061|O75909-1|CCNK;REV__nc|ENSG00000090061|O75909-2|CCNK;REV__nc|ENSG00000090061|O75909-4|CCNK	29.170058357718403	0.40439580130713204	2				NaN	NaN	0	NaN	371	2243	2614
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2628	12.461	NaN	25669	30	0	6393.3	0.214	+			38782	SSMPSSRHK	9	53	339.50264897217227	1015.4861175167168	3	339.5030212402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSMPSSRHK_	AFF4|p.R689Gfs*28|1|0.29|ENSG00000072364|chr5:132896566-132896566|A/-|frameshift_variant;ENSG00000072364|ENST00000265343|AFF4;nc|ENSG00000072364|Q9UHB7-2|AFF4	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	380	2246	2627
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2629	12.465	NaN	34511	30	0	8771.3	0.106	+			5387	ATYETKESKK	10	71	395.54313853442443	1183.6075862034734	3	395.543701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATYETKESKK_	ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65623404-65625570:-|nuORF;nc|ENSG00000165410|Q9Y281-3|CFL2	56.632244143249146	0.3964695498866976	2				NaN	NaN	0	NaN	381	2246	2627
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2630	12.467	NaN	1729.4	30	0	567.37	0.035			+	11957	FVKSAPIKL	9	29	334.8817443847656	NaN	0	334.8817443847656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FVKSAPIKL_	REV__ASH1L|p.H1793Ifs*7|1|0.13|ENSG00000116539|chr1:155438778-155438778|G/-|frameshift_variant;REV__ASH1L|p.I970Lfs*9|1|0.2|ENSG00000116539|chr1:155479962-155479962|T/-|frameshift_variant;REV__ASH1L|p.K1222Rfs*11|4|0.27|ENSG00000116539|chr1:155479205-155479205|T/-|frameshift_variant;REV__ASH1L|p.K1533Sfs*17|1|0.25|ENSG00000116539|chr1:155478272-155478272|T/-|frameshift_variant;REV__ASH1L|p.K2377Nfs*5|1|0.28|ENSG00000116539|chr1:155354570-155354570|T/-|frameshift_variant;REV__ASH1L|p.N1822Tfs*2|1|0.33|ENSG00000116539|chr1:155438690-155438690|T/-|frameshift_variant;REV__ASH1L|p.S2309Ifs*11|1|0.64|ENSG00000116539|chr1:155357635-155357636|-/T|frameshift_variant;REV__ENSG00000116539|ENST00000392403|ASH1L;REV__nc|ENSG00000116539|Q9NR48|ASH1L	31.529811441608018	0.3183796599642538	2				NaN	NaN	0	NaN	382	2246	2627
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2641	12.492	NaN	6197.6	30	0	1918.6	0.214				-1	 	0	56	474.27908071805786	946.5436085029157	2	474.27947998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	390	2249	2640
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2642	12.496	NaN	2798.1	30	0	889.27	0.106	+			45739	VADQCHGLR	9	26	333.49923815868743	997.4758850762623	3	333.4994812011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VADQCHGLR_	ENSG00000005812|ENST00000355619|FBXL3	19.996771675451527	0.6112419832031292	2				NaN	NaN	0	NaN	391	2249	2640
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2643	12.498	NaN	991.48	30	0	185.33	0.036				-1	RTIVFCSW	8	36	534.7682545628669	NaN	0	534.7685546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_RTIVFC(Carbamidomethyl (C))SW_	ENSG00000177694|ENST00000454872|NAALADL2;ENST00000414826.1_1_3:175177932-175205321:+|nuORF;ENST00000473253.5_1_3:174581768-175298945:+|nuORF	31.954861631926434	1.7418937515398478	2				NaN	NaN	0	NaN	392	2249	2640
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2654	12.523	NaN	65596	30	0	20563	0.214	+			5635	AVDAPRRHK	9	78	525.301293274699	1048.588033616198	2	525.3023071289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVDAPRRHK_	ENSG00000119912|ENST00000265986|IDE;ENST00000496903.5_1_10:94214203-94257457:-|nuORF;nc|ENSG00000119912|P14735-2|IDE	47.95952297671804	0.32689736945648856	2				NaN	NaN	0	NaN	400	2252	2653
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2655	12.526	NaN	5494.6	30	0	919.68	0.106				-1	KRFQVCAQ	8	61	518.772374330726	1035.530195728252	2	518.7734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_KRFQVC(Carbamidomethyl (C))AQ_	ENST00000588524.5_1_19:11687775-11688428:-|nuORF	50.0245360154114	0.5941082100236891	2				NaN	NaN	0	NaN	401	2252	2653
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2656	12.528	NaN	2572.8	30	0	557.63	0.106	+			22492	KTNPNSIKK	9	52	515.3060519447988	1028.5975509563975	2	515.306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KTNPNSIKK_	ENSG00000065328|ENST00000378714|MCM10;ENST00000481292.1_1_10:13237140-13243699:+|nuORF;MCM10|p.N701Tfs*35|2|0.27|ENSG00000065328|chr10:13197741-13197741|A/-|frameshift_variant;MCM10|p.R719Gfs*17|1|0.35|ENSG00000065328|chr10:13198715-13198715|A/-|frameshift_variant;nc|ENSG00000065328|Q7L590|MCM10	141.52041321563706	0.009766778904176347	2				NaN	NaN	0	NaN	402	2252	2653
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2657	12.53	NaN	1218.6	30	0	286.39	0.106			+	-1	EKCITIIGL	9	34	349.5366165964786	NaN	0	349.5365905761719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_EKC(Carbamidomethyl (C))ITIIGL_	REV__ENSG00000165323|ENST00000525166|FAT3;REV__FAT3|p.N1793Kfs*14|1|0.21|ENSG00000165323|chr11:92798835-92798836|-/A|frameshift_variant;REV__FAT3|p.P4078Rfs*36|1|0.42|ENSG00000165323|chr11:92883135-92883135|C/-|frameshift_variant;REV__FAT3|p.V1884Sfs*21|1|0.26|ENSG00000165323|chr11:92799110-92799110|G/-|frameshift_variant;REV__FAT3|p.V4082Rfs*13|1|0.23|ENSG00000165323|chr11:92883145-92883146|-/C|frameshift_variant;REV__FAT3|p.V4210Cfs*6|1|0.05|ENSG00000165323|chr11:92889212-92889213|-/T|frameshift_variant;REV__nc|ENSG00000165323|Q8TDW7|FAT3	27.047317107675042	0.34101084205454363	2				NaN	NaN	0	NaN	403	2252	2653
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2658	12.532	NaN	599.61	30	0	128.9	0.106				-1	VICERSKNK	9	21	378.54132080078125	NaN	0	378.54132080078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_VIC(Carbamidomethyl (C))ERSKNK_	ENSG00000176915|ENST00000357997|ANKLE2;ENST00000538591.5_1_12:133311987-133319805:-|nuORF;nc|ENSG00000176915|Q86XL3-2|ANKLE2	19.996771675451527	0.3693019437812985	2				NaN	NaN	0	NaN	404	2252	2653
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2659	12.534	NaN	2883.7	30	0	1458.4	0.036			+	29966	PNTKEKGKK	9	42	343.8724951084003	1028.595655925401	3	343.8731994628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PNTKEKGKK_	REV__ENST00000372857.7_1_1:40042222-40042411:-|nuORF;REV__ENST00000451091.2_1_1:40041726-40042411:-|nuORF;REV__ENST00000531243.2_1_1:40041622-40042411:-|nuORF	39.252832667884924	0.4290233611298554	2				NaN	NaN	0	NaN	405	2252	2653
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2670	12.559	NaN	2942.3	30	0	783.7	0.214				-1	 	0	52	501.82400471734826	1001.6334565014965	2	501.8241271972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	413	2255	2669
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2671	12.563	NaN	4073.6	30	0	631.83	0.106			+	28712	NNKDRSGPVS	10	57	537.2703767587869	1072.5262005843738	2	537.2713623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NNKDRSGPVS_	REV__ENSG00000277481|ENST00000620267|PKD1L3	33.921630207806714	0.6028135429846169	2				NaN	NaN	0	NaN	414	2255	2669
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2672	12.565	NaN	1479.8	30	0	193.77	0.106			+	7515	DGPRVSVS	8	33	408.71436041216145	815.4141678911229	2	408.7148132324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DGPRVSVS_	REV__ENST00000568396.2_1_16:67881454-67899118:+|nuORF	25.450171626174864	0.7628259754767981	2				NaN	NaN	0	NaN	415	2255	2669
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2673	12.566	NaN	508.21	30	0	59.441	0.035	+			20338	KERNLKVK	8	33	507.8240661621094	NaN	0	507.8240661621094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KERNLKVK_	ENST00000438503.1_1_2:149627595-149627934:-|nuORF	21.9598887501803	1.7418937515398478	2				NaN	NaN	0	NaN	416	2255	2669
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2684	12.592	NaN	9016	30	0	2171	0.214			+	20046	KEKATEMTR	9	68	547.2872605659774	1092.5599681987546	2	547.2882080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEKATEMTR_	REV__ENSG00000166866|ENST00000300119|MYO1A	145.15565482312357	0.00806134135205793	2				NaN	NaN	0	NaN	424	2258	2683
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2685	12.595	NaN	2059.1	30	0	344.42	0.106			+	31201	QGRDYSKRR	9	39	389.2108459472656	NaN	0	389.2108459472656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QGRDYSKRR_	REV__ENSG00000116852|ENST00000461742|KIF21B;REV__nc|ENSG00000116852|O75037-2|KIF21B;REV__nc|ENSG00000116852|O75037-3|KIF21B;REV__nc|ENSG00000116852|O75037|KIF21B	37.81151784470057	0.28666463014928195	2				NaN	NaN	0	NaN	425	2258	2683
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2686	12.597	NaN	422.61	30	0	54.437	0.106			+	11206	FHTEAARKE	9	22	544.7764282226562	NaN	0	544.7764282226562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FHTEAARKE_	REV__ENSG00000110871|ENST00000288532|COQ5;REV__ENST00000547448.1_1_12:120965158-120966944:-|nuORF;REV__ENST00000547736.1_1_12:120964341-120966944:-|nuORF	16.473147378115264	0.38122769658151995	2				NaN	NaN	0	NaN	426	2258	2683
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2687	12.599	NaN	1742.7	30	0	725.92	0.036	+			34739	RWTKGRKQ	8	41	353.8768615722656	NaN	0	353.8768615722656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RWTKGRKQ_	ENST00000323851.11_1_8:134250879-134250972:-|nuORF	42.396135135203025	1.7418937515398478	2				NaN	NaN	0	NaN	427	2258	2683
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2708	12.651	NaN	1136.7	30	0	243.09	0.214	+			20596	KGAFQERKG	9	39	510.7848637502031	NaN	0	510.7846374511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KGAFQERKG_	ENST00000357760.6_2_1:1643857-1647838:-|nuORF;nc|ENSG00000008128|Q9UQ88-8|CDK11A	42.396135135203025	0.2590952873412954	2				NaN	NaN	0	NaN	442	2264	2707
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2709	12.655	NaN	4726.3	30	0	585.92	0.033			+	1977	AKAAFDKK	8	67	439.75700803656713	877.4994631399343	2	439.7568054199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AKAAFDKK_	REV__ENSG00000162437|ENST00000294428|RAVER2;REV__nc|ENSG00000162437|Q9HCJ3-2|RAVER2	53.351449002276354	0.5676011784961348	2				NaN	NaN	0	NaN	443	2264	2707
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2730	12.707	NaN	40256	30	0	27883	0.214	+			34072	RSPMGAMNVGK	11	55	383.19542290452097	1146.564439313763	3	383.5299072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RSPMGAMNVGK_	ZNF793|p.C288Vfs*113|2|0.29|ENSG00000188227|chr19:37537513-37537513|T/-|frameshift_variant;ZNF793|p.C344Rfs*60|1|0.12|ENSG00000188227|chr19:37537687-37537688|-/AGGGTCTC|frameshift_variant	31.068146907933308	0.6639116734509778	2				NaN	NaN	0	NaN	458	2270	2729
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2731	12.711	NaN	4096.5	30	0	1110.1	0.106	+			22940	KVQEPQGKAK	10	52	371.551928553668	1111.633956261204	3	371.5522766113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVQEPQGKAK_	ENSG00000167397|ENST00000394975|VKORC1;ENST00000394971.7_1_16:31102457-31105584:-|nuORF;ENST00000394974.2_1_1:58694357-58694534:-|nuORF	49.536043120802724	0.461275219792494	2				NaN	NaN	0	NaN	459	2270	2729
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2732	12.713	NaN	296.21	30	0	67.551	0.106			+	32809	RAVDSLKL	8	19	451.2768859863281	NaN	0	451.2768859863281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RAVDSLKL_	REV__ENSG00000161920|ENST00000293777|MED11	16.473147378115264	1.7418937515398478	2				NaN	NaN	0	NaN	460	2270	2729
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2733	12.714	NaN	893.98	30	0	259.6	0.035	+			22062	KSKREKKD	8	38	509.80330838415455	NaN	0	509.8033447265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KSKREKKD_	ENSG00000113302|ENST00000231228|IL12B	24.519189625965996	1.7418937515398478	2				NaN	NaN	0	NaN	461	2270	2729
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2744	12.74	NaN	46004	30	0	8197.5	0.214				-1	 	0	89	340.20093378605765	1017.580971958373	3	340.20123291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	469	2273	2743
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2745	12.743	NaN	2878.5	30	0	619.36	0.106				-1	 	0	54	485.8052372141072	969.5959214950144	2	485.805419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	470	2273	2743
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2746	12.745	NaN	1391.6	30	0	481.85	0.106			+	-1	KQMLALRLW	9	32	392.22903420036175	NaN	0	392.2291259765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_KQM(Oxidation (M))LALRLW_	REV__ENSG00000018189|ENST00000381006|RUFY3;REV__ENSG00000204130|ENST00000602465|RUFY2;REV__ENST00000472394.2_1_10:70143908-70166946:-|nuORF;REV__nc|ENSG00000018189|Q7L099-2|RUFY3;REV__nc|ENSG00000018189|Q7L099-4|RUFY3;REV__nc|ENSG00000018189|Q7L099|RUFY3;REV__nc|ENSG00000204130|Q8WXA3-1|RUFY2;REV__nc|ENSG00000204130|Q8WXA3-3|RUFY2;REV__nc|ENSG00000204130|Q8WXA3-5|RUFY2	18.262085536374414	0.37517301184500873	2				NaN	NaN	0	NaN	471	2273	2743
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2747	12.747	NaN	1512.5	30	0	167.38	0.106	+			25942	LSHSALKQ	8	53	442.2534013188149	NaN	0	442.28948974609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSHSALKQ_	ENSG00000092200|ENST00000400017|RPGRIP1;nc|ENSG00000092200|Q96KN7-2|RPGRIP1;nc|ENSG00000092200|Q96KN7-3|RPGRIP1;nc|ENSG00000092200|Q96KN7-4|RPGRIP1;nc|ENSG00000092200|Q96KN7-5|RPGRIP1	47.657333605630114	1.7418937515398478	2				NaN	NaN	0	NaN	472	2273	2743
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2748	12.749	NaN	755.16	30	0	66.917	0.106	+			6847	CIVFRVLQ	8	40	489.28450533859825	976.5544577439965	2	489.2848205566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_CIVFRVLQ_	ENST00000462700.5_1_20:61464351-61470045:+|nuORF;ENST00000469802.5_1_20:61464351-61467803:+|nuORF	40.5726180659479	0.6527593143185008	2				NaN	NaN	0	NaN	473	2273	2743
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2749	12.751	NaN	290.13	30	0	70.246	0.034			+	26476	LTLIRSSGN	9	22	480.7769470214844	NaN	0	480.7769470214844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LTLIRSSGN_	REV__ENSG00000124006|ENST00000404537|OBSL1;REV__nc|ENSG00000124006|O75147-4|OBSL1	10.865556482863946	0.40020666175442315	2				NaN	NaN	0	NaN	474	2273	2743
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2750	12.751	NaN	5816.4	30	0	1638.8	0.145			+	21285	KLQLIQNKTQQ	11	55	447.93241045109176	1340.7754019534752	3	447.9325256347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KLQLIQNKTQQ_	REV__tr|U7SSP1|U7SSP1_FUSNUP-typeconjugativetransferproteinTrbJOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01520PE=4SV=1	37.50817390946774	0.5920388381045607	2				NaN	NaN	0	NaN	475	2273	2743
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2761	12.779	NaN	6663.9	30	0	2960.2	0.214				-1	 	0	64	487.2744744737452	972.5343960142905	2	487.27484130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	483	2276	2760
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2762	12.782	NaN	1638.6	30	0	310.32	0.106	+			41153	SVKEPSKTAK	10	55	537.811500833282	NaN	0	537.8115234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVKEPSKTAK_	ENSG00000148019|ENST00000643273|CEP78;ENST00000536374.1_1_9:80851502-80863830:+|nuORF;nc|ENSG00000148019|Q5JTW2-2|CEP78;nc|ENSG00000148019|Q5JTW2-5|CEP78;nc|ENSG00000148019|Q5JTW2|CEP78	53.08895987439943	0.2860736266326207	2				NaN	NaN	0	NaN	484	2276	2760
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2763	12.784	NaN	1535.6	30	0	208.49	0.106			+	-1	QLEDMLLR	8	60	517.2725680029703	1032.5305830727405	2	517.2734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_QLEDM(Oxidation (M))LLR_	REV__ENST00000395255.7_1_10:64239676-64239931:+|nuORF	44.116797842482775	0.6307669463330267	2				NaN	NaN	0	NaN	485	2276	2760
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2764	12.786	NaN	1466.4	30	0	427.53	0.106	+			17088	HSCPESVKK	9	50	357.8465519962516	NaN	0	357.84661865234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_HSC(Carbamidomethyl (C))PESVKK_	ENSG00000178425|ENST00000319550|NT5DC1;nc|ENSG00000178425|Q5TFE4-2|NT5DC1;NT5DC1|p.F379Lfs*74|1|0.1|ENSG00000178425|chr6:116239002-116239002|T/-|frameshift_variant	41.42661286455405	0.26577678759562784	2				NaN	NaN	0	NaN	486	2276	2760
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2765	12.788	NaN	444.76	30	0	119.64	0.106			+	21438	KNAVNGVPEL	10	26	520.7896118164062	NaN	0	520.7896118164062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KNAVNGVPEL_	REV__ENSG00000128591|ENST00000325888|FLNC;REV__FLNC|p.A1081Rfs*17|1|0.11|ENSG00000128591|chr7:128844701-128844701|C/-|frameshift_variant;REV__FLNC|p.H2471Tfs*58|1|0.18|ENSG00000128591|chr7:128856767-128856767|C/-|frameshift_variant;REV__FLNC|p.R1426Gfs*12|1|0.33|ENSG00000128591|chr7:128846887-128846887|G/-|frameshift_variant;REV__FLNC|p.V1896Wfs*57|1|0.04|ENSG00000128591|chr7:128851472-128851472|G/-|frameshift_variant;REV__nc|ENSG00000128591|Q14315-2|FLNC	40.77816245573522	0.36390427802201647	2				NaN	NaN	0	NaN	487	2276	2760
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2766	12.79	NaN	1247.8	30	0	354.65	0.035	+			38919	SSPSPPPALL	10	24	322.51348876953125	NaN	0	322.51348876953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSPSPPPALL_	CNDP1|p.A90Pfs*62|1|0.38|ENSG00000150656|chr18:74559433-74559433|G/-|frameshift_variant;CNDP1|p.D222Vfs*2|1|0.05|ENSG00000150656|chr18:74567340-74567341|-/GTTT|frameshift_variant;ENSG00000150656|ENST00000358821|CNDP1	29.170058357718403	0.40439580130713204	2				NaN	NaN	0	NaN	488	2276	2760
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2767	12.79	NaN	1737.6	30	0	321.69	0.138	+			25943	LSHSALKQ	8	41	442.2534013188149	NaN	0	442.2532958984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSHSALKQ_	ENSG00000092200|ENST00000400017|RPGRIP1;nc|ENSG00000092200|Q96KN7-2|RPGRIP1;nc|ENSG00000092200|Q96KN7-3|RPGRIP1;nc|ENSG00000092200|Q96KN7-4|RPGRIP1;nc|ENSG00000092200|Q96KN7-5|RPGRIP1	63.30626980617807	1.7418937515398478	2				NaN	NaN	0	NaN	489	2276	2760
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2780	12.819	NaN	12144	30	0	2450.8	0.214				-1	 	0	45	376.55083526997765	1126.630676410133	3	376.5513000488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	499	2279	2779
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2781	12.823	NaN	421.02	30	0	75.077	0.106	+			12360	GDPVPKSPFV	10	19	348.1890563964844	NaN	0	348.1890563964844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GDPVPKSPFV_	ENSG00000128591|ENST00000325888|FLNC;FLNC|p.A1081Rfs*17|1|0.11|ENSG00000128591|chr7:128844701-128844701|C/-|frameshift_variant;FLNC|p.H2471Tfs*58|1|0.18|ENSG00000128591|chr7:128856767-128856767|C/-|frameshift_variant;FLNC|p.R1426Gfs*12|1|0.33|ENSG00000128591|chr7:128846887-128846887|G/-|frameshift_variant;FLNC|p.V1896Wfs*57|1|0.04|ENSG00000128591|chr7:128851472-128851472|G/-|frameshift_variant;nc|ENSG00000128591|Q14315-2|FLNC	16.006774744331256	0.4201028297492154	2				NaN	NaN	0	NaN	500	2279	2779
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2782	12.825	NaN	283.72	30	0	59.378	0.106	+			50363	WVRLATVFAY	10	19	409.2301025390625	NaN	0	409.2301025390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_WVRLATVFAY_	ENSG00000259330|ENST00000638170|INAFM2	12.811709888998246	0.42010282974921537	2				NaN	NaN	0	NaN	501	2279	2779
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2783	12.826	NaN	1049.1	30	0	261.74	0.106	+			22472	KTMMKNAQK	9	39	540.2886962890625	NaN	0	540.2886962890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTMMKNAQK_	ENSG00000107937|ENST00000360803|GTPBP4;nc|ENSG00000107937|Q9BZE4-2|GTPBP4;nc|ENSG00000107937|Q9BZE4-3|GTPBP4	37.81151784470057	0.28666463014928195	2				NaN	NaN	0	NaN	502	2279	2779
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2784	12.828	NaN	1761.9	30	0	671.9	0.106	+			33788	RQFEGRHSK	9	36	572.802439904339	1143.590326875478	2	572.80322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RQFEGRHSK_	ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1670Tfs*23|1|0.29|ENSG00000174231|chr17:1659487-1659487|C/-|frameshift_variant	53.08895987439943	0.27122541748218487	2				NaN	NaN	0	NaN	503	2279	2779
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2785	12.83	NaN	1237.4	30	0	233.2	0.038	+			21501	KNLKVNIDKK	10	41	600.3768638625313	1198.7391747918625	2	600.3772583007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KNLKVNIDKK_	tr|U7SNA9|U7SNA9_FUSNUSignalpeptidaseIOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01773PE=3SV=1	42.86426827375447	0.522752283233888	2				NaN	NaN	0	NaN	504	2279	2779
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2786	12.831	NaN	332.37	30	0	36.729	0.141	+			22745	KVCSLLEP	8	23	444.7484130859375	NaN	0	444.7484130859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KVCSLLEP_	ENSG00000159339|ENST00000375448|PADI4	12.959181472943097	1.7418937515398478	2				NaN	NaN	0	NaN	505	2279	2779
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2797	12.858	NaN	2159.1	30	0	589.2	0.214	+			15202	GTSSKQVVK	9	50	467.27131615359394	NaN	0	467.27130126953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTSSKQVVK_	ENSG00000125484|ENST00000372146|GTF3C4	49.536043120802724	0.20989033510253738	2				NaN	NaN	0	NaN	513	2282	2796
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2798	12.861	NaN	2430.5	30	0	707.56	0.106				-1	 	0	49	474.27908071805786	946.5436085029157	2	474.27947998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	514	2282	2796
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2799	12.863	NaN	881.85	30	0	366.58	0.036	+			30791	QEAKLKAKGL	10	36	543.3375775972156	NaN	0	543.3373413085938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QEAKLKAKGL_	ENSG00000163660|ENST00000295926|CCNL1;ENST00000464679.5_1_3:156867272-156869982:-|nuORF;ENST00000470121.5_1_3:156866032-156869342:-|nuORF;ENST00000474539.5_1_3:156866032-156868247:-|nuORF;ENST00000476367.5_1_3:156867074-156874849:-|nuORF;nc|ENSG00000163660|Q9UK58-6|CCNL1	15.641811463095205	0.4201028297492154	2				NaN	NaN	0	NaN	515	2282	2796
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2810	12.888	NaN	13279	30	0	1282.3	0.143	+			14226	GSSRQSIQK	9	75	495.7694179114334	989.5242828896668	2	495.7697448730469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSSRQSIQK_	ENSG00000189060|ENST00000340857|H1-0;nc|ENSG00000189060|P07305-2|H1-0	83.6470233535746	0.08277643980271215	2				NaN	NaN	0	NaN	523	2285	2809
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2822	12.916	NaN	2853	30	0	696.44	0.214				-1	 	0	54	501.82400471734826	1001.6334565014965	2	501.8246154785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	532	2288	2821
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2823	12.92	NaN	1261.6	30	0	131.09	0.106				-1	KCLKVLPPS	9	44	521.3114741042851	1040.6083952753702	2	521.26513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_KC(Carbamidomethyl (C))LKVLPPS_	nc|ENSG00000117335|P15529-10|CD46;nc|ENSG00000117335|P15529-13|CD46;nc|ENSG00000117335|P15529-16|CD46;nc|ENSG00000117335|P15529-2|CD46;nc|ENSG00000117335|P15529-5|CD46;nc|ENSG00000117335|P15529|CD46	42.396135135203025	0.392153681582562	2				NaN	NaN	0	NaN	533	2288	2821
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2824	12.922	NaN	1517.2	30	0	248.25	0.106	+			27130	MASLALLQ	8	45	423.7401330416197	NaN	0	423.73992919921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MASLALLQ_	ENSG00000111237|ENST00000549578|VPS29;ENST00000548259.1_1_12:110930799-110939856:-|nuORF;nc|ENSG00000111237|Q9UBQ0-2|VPS29	47.91560031466742	1.7418937515398478	2				NaN	NaN	0	NaN	534	2288	2821
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2825	12.923	NaN	1344.5	30	0	406.14	0.037			+	12067	GAAGQMVVTRP	11	36	362.861310896194	NaN	0	362.8622741699219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GAAGQMVVTRP_	REV__ENSG00000142405|ENST00000324134|NLRP12;REV__nc|ENSG00000142405|P59046-2|NLRP12;REV__nc|ENSG00000142405|P59046-3|NLRP12;REV__nc|ENSG00000142405|P59046-4|NLRP12;REV__nc|ENSG00000142405|P59046-6|NLRP12;REV__nc|ENSG00000142405|P59046-7|NLRP12;REV__NLRP12|p.V730*|2|0.38|ENSG00000142405|chr19:53807550-53807550|C/-|frameshift_variant	32.75053402867276	0.4194607570143992	2				NaN	NaN	0	NaN	535	2288	2821
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2836	12.949	NaN	1922.7	30	0	514.87	0.214	+			30795	QEALFRHQ	8	45	514.7668827965134	1027.5192126598267	2	514.7677001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QEALFRHQ_	ENSG00000149201|ENST00000445632|CCDC81;nc|ENSG00000149201|Q6ZN84-2|CCDC81	54.776311868738084	0.5534952410049249	2				NaN	NaN	0	NaN	543	2291	2835
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2837	12.952	NaN	1396.4	30	0	575.75	0.106	+			7917	DSEHTRRK	8	27	343.51367132689245	1027.5191845808774	3	343.5140380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DSEHTRRK_	CNTROB|p.L713Cfs*27|1|0.4|ENSG00000170037|chr17:7947710-7947710|T/-|frameshift_variant;ENSG00000170037|ENST00000563694|CNTROB;ENST00000571632.5_1_17:7838298-7849136:+|nuORF;nc|ENSG00000170037|Q8N137-2|CNTROB;nc|ENSG00000170037|Q8N137-3|CNTROB;nc|ENSG00000170037|Q8N137-4|CNTROB;nc|ENSG00000170037|Q8N137-5|CNTROB	28.2542754592877	0.7411748056684583	2				NaN	NaN	0	NaN	544	2291	2835
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2838	12.954	NaN	959.8	30	0	131.35	0.106			+	31983	QRDPLHKR	8	36	525.301293274699	1048.588033616198	2	525.29736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QRDPLHKR_	REV__ENSG00000068394|ENST00000156109|GPKOW	37.15910966729921	0.6739408393984688	2				NaN	NaN	0	NaN	545	2291	2835
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2839	12.956	NaN	21598	30	0	5485	0.106			+	-1	RVKEPAQCML	10	68	411.21450591360156	1230.6216883410048	3	411.5491638183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_RVKEPAQC(Carbamidomethyl (C))ML_	REV__ENSG00000125848|ENST00000341420|FLRT3;REV__FLRT3|p.I542Rfs*9|1|0.03|ENSG00000125848|chr20:14325882-14325883|-/CTCTATCC|frameshift_variant	41.42661286455405	0.5359995577334734	2				NaN	NaN	0	NaN	546	2291	2835
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2840	12.958	NaN	1299.7	30	0	374.86	0.106				-1	 	0	48	485.8052372141072	969.5959214950144	2	486.2547607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	547	2291	2835
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2841	12.96	NaN	1797	30	0	564.51	0.035	+			40079	STNRKPLTK	9	48	522.8113030120644	1043.6080530909287	2	522.8116455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STNRKPLTK_	ENSG00000138593|ENST00000559471|SECISBP2L;ENST00000559198.1_1_15:49303877-49305024:-|nuORF;nc|ENSG00000138593|Q93073-2|SECISBP2L;SECISBP2L|p.D531N|1|0.1|ENSG00000138593|chr15:49012788-49012788|C/T|missense_variant	56.43379154798735	0.2433427591689151	2				NaN	NaN	0	NaN	548	2291	2835
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2842	12.96	NaN	1441.5	30	0	279.25	0.14	+			47635	VSARQELKQ	9	46	529.8013845043419	NaN	0	529.8014526367188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VSARQELKQ_	ENSG00000167658|ENST00000309311|EEF2	42.86426827375447	0.2558691296974908	2				NaN	NaN	0	NaN	549	2291	2835
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2854	12.988	NaN	321630	30	0	43479	0.214				-1	 	0	164	391.2102521980945	1170.6089271944836	3	391.2107238769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	558	2294	2853
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2855	12.991	NaN	2480.2	30	0	435.34	0.106	+			30733	QDLEVIVIL	9	49	521.3114741042851	1040.6083952753702	2	521.3121948242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QDLEVIVIL_	ENSG00000121361|ENST00000240662|KCNJ8	36.446750945000026	0.4619375763483977	2				NaN	NaN	0	NaN	559	2294	2853
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2856	12.993	NaN	670.35	30	0	246.88	0.106			+	-1	KLHRNCVNR	9	23	399.5531005859375	NaN	0	399.5531005859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_KLHRNC(Carbamidomethyl (C))VNR_	REV__ENST00000604516.1_1_6:79944081-79944252:+|nuORF	19.1035232394073	0.3723251548669699	2				NaN	NaN	0	NaN	560	2294	2853
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2857	12.995	NaN	2629.7	30	0	295.39	0.106			+	34074	RSPNLQTGP	9	58	485.2585489394304	968.5025449456608	2	485.25921630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RSPNLQTGP_	REV__ENSG00000148429|ENST00000609104|USP6NL;REV__nc|ENSG00000148429|Q92738-2|USP6NL	62.107414245175825	0.1960472003779324	2				NaN	NaN	0	NaN	561	2294	2853
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2858	12.997	NaN	950.55	30	0	252.58	0.106			+	3460	ASRSRRAK	8	39	466.28206536206244	NaN	0	466.2821960449219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASRSRRAK_	REV__ENSG00000153827|ENST00000675903|TRIP12;REV__ENST00000479037.5_1_2:230672327-230744801:-|nuORF;REV__nc|ENSG00000153827|Q14669-2|TRIP12;REV__nc|ENSG00000153827|Q14669-3|TRIP12;REV__nc|ENSG00000153827|Q14669|TRIP12;REV__TRIP12|p.H1434Afs*2|1|0.16|ENSG00000153827|chr2:229791143-229791144|-/T|frameshift_variant;REV__TRIP12|p.N880Kfs*36|1|0.21|ENSG00000153827|chr2:229804013-229804014|-/T|frameshift_variant;REV__TRIP12|p.S1195Lfs*24|6|0.27|ENSG00000153827|chr2:229796599-229796599|A/-|frameshift_variant;REV__TRIP12|p.Y1552Lfs*6|1|0.12|ENSG00000153827|chr2:229787620-229787621|-/A|frameshift_variant	26.69291269510374	1.7418937515398478	2				NaN	NaN	0	NaN	562	2294	2853
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2859	12.999	NaN	1739.6	30	0	390.73	0.036	+			49076	VVKPKKAAPK	10	46	533.3613267651311	NaN	0	533.3611450195312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VVKPKKAAPK_	ENSG00000187837|ENST00000343677|H1-2	40.05817265558897	0.3684561582319974	2				NaN	NaN	0	NaN	563	2294	2853
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2860	12.999	NaN	3269.5	30	0	1025.6	0.145				-1	CTLQGKVGLPA	11	32	381.8787478905147	1142.6144142717442	3	381.87921142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_C(Carbamidomethyl (C))TLQGKVGLPA_	ENST00000527653.1_1_8:145139038-145139470:+|nuORF	20.030474535948922	0.7766990143561855	2				NaN	NaN	0	NaN	564	2294	2853
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2873	13.028	NaN	4899.9	30	0	459.89	0.214			+	7890	DRRSPLPE	8	63	485.2585489394304	968.5025449456608	2	485.2586975097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DRRSPLPE_	REV__ENSG00000147274|ENST00000320676|RBMX;REV__ENSG00000213516|ENST00000652648|RBMXL1;REV__nc|ENSG00000147274|P38159-2|RBMX	57.81127852772723	0.5234495074909924	2				NaN	NaN	0	NaN	574	2297	2872
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2874	13.032	NaN	972.15	30	0	234.19	0.106				-1	ACCCCCGDEM	10	29	351.7472839355469	NaN	0	351.7472839355469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_ACCCCCGDEM(Oxidation (M))_	ENSG00000135272|ENST00000393486|MDFIC;ENST00000431629.5_2_7:114654517-114655986:+|nuORF;nc|ENSG00000135272|Q9P1T7-1|MDFIC	2.027967841256958	0.4201028297492154	2				NaN	NaN	0	NaN	575	2297	2872
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2875	13.033	NaN	2145.4	30	0	443.84	0.106			+	-1	MIKKCTPKR	9	33	387.89093017578125	NaN	0	387.89093017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_MIKKC(Carbamidomethyl (C))TPKR_	REV__ENSG00000144935|ENST00000476941|TRPC1;REV__ENST00000480101.1_1_3:142499823-142503920:+|nuORF;REV__nc|ENSG00000144935|P48995-2|TRPC1	24.519189625965996	0.35377483217337163	2				NaN	NaN	0	NaN	576	2297	2872
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2876	13.035	NaN	812.69	30	0	107.75	0.106			+	-1	FLILVMINA	9	35	525.3048095703125	NaN	0	525.3048095703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_FLILVM(Oxidation (M))INA_	REV__ENSG00000188782|ENST00000456354|CATSPER4;REV__nc|ENSG00000188782|Q7RTX7-2|CATSPER4	33.51558372728122	0.30835390848773375	2				NaN	NaN	0	NaN	577	2297	2872
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2877	13.037	NaN	423.65	30	0	63.906	0.106			+	31892	QQELYLRIV	9	29	581.333228336704	NaN	0	581.333251953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QQELYLRIV_	REV__ENSG00000130340|ENST00000392185|SNX9	14.137123925751023	0.3891339986947948	2				NaN	NaN	0	NaN	578	2297	2872
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2878	13.039	NaN	1468.8	30	0	143.84	0.034				-1	MAPASTAEGA	10	43	461.202304253732	NaN	0	461.20220947265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_M(Oxidation (M))APASTAEGA_	ENSG00000197483|ENST00000598519|ZNF628;ZNF628|p.Q661Sfs*63|1|0.35|ENSG00000197483|chr19:55483170-55483170|C/-|frameshift_variant	35.61828744233558	0.3832230071539346	2				NaN	NaN	0	NaN	579	2297	2872
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2879	13.039	NaN	126.55	30	0	26.272	0.142				-1	QLPLALCLVC	10	8	586.313232421875	NaN	0	586.313232421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))QLPLALCLVC(Carbamidomethyl (C))_	ENSG00000167941|ENST00000301691|SOST;nc|ENSG00000167941|Q9BQB4-2|SOST	7.193352174278301	0.4201028297492154	2				NaN	NaN	0	NaN	580	2297	2872
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2890	13.066	NaN	61768	30	0	12634	0.214	+			37731	SLTGSTQVGK	10	78	326.51331243514437	976.5181079056331	3	326.5135192871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLTGSTQVGK_	ALDH7A1|p.F272L|1|0.11|ENSG00000164904|chr5:126568316-126568316|A/G|missense_variant	37.81151784470057	0.569310847604193	2				NaN	NaN	0	NaN	588	2300	2889
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2891	13.07	NaN	14483	30	0	2359.9	0.106				-1	 	0	77	519.7874547426134	1037.5603565520266	2	519.7883911132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	589	2300	2889
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2892	13.072	NaN	1067.6	30	0	158.68	0.106			+	33876	RRLTRNGAK	9	46	536.329727742913	NaN	0	536.330078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RRLTRNGAK_	REV__ENST00000319023.6_1_11:71175173-71184379:+|nuORF	44.377184641726394	0.24544280798894275	2				NaN	NaN	0	NaN	590	2300	2889
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2893	13.073	NaN	2576.7	30	0	664.61	0.036			+	41150	SVKASARKNG	10	40	339.8650458204398	NaN	0	339.8647155761719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVKASARKNG_	REV__ENSG00000073578|ENST00000264932|SDHA;REV__ENST00000502379.5_1_5:218428-224813:+|nuORF;REV__ENST00000504824.5_1_5:218488-235547:+|nuORF;REV__ENST00000505555.5_1_5:218470-251793:+|nuORF;REV__nc|ENSG00000073578|P31040-2|SDHA;REV__nc|ENSG00000073578|P31040-3|SDHA	25.57405402267927	0.4162033004763879	2				NaN	NaN	0	NaN	591	2300	2889
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2905	13.099	NaN	18491	30	0	3494.9	0.214			+	17211	HVGRKTAEI	9	79	505.79018586639324	1009.5658187995865	2	505.7904968261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HVGRKTAEI_	REV__tr|U7SXH2|U7SXH2_FUSNUAlanineracemaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00954PE=3SV=1	95.81516180277367	0.04847050768394289	2				NaN	NaN	0	NaN	600	2303	2904
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2906	13.103	NaN	9374.2	30	0	1931.9	0.106			+	17067	HRELTLNK	8	70	337.529254184966	1009.565933155098	3	337.5294494628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HRELTLNK_	REV__ENSG00000167196|ENST00000308275|FBXO22;REV__nc|ENSG00000167196|Q8NEZ5-3|FBXO22	49.44154591367651	0.597725784090933	2				NaN	NaN	0	NaN	601	2303	2904
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2907	13.104	NaN	4571.4	30	0	1432.8	0.106	+			6095	AVNKQLHQK	9	61	355.87667787010844	1064.6082042105254	3	355.8769226074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVNKQLHQK_	ENSG00000128944|ENST00000249776|KNSTRN;ENST00000560220.5_1_15:40676698-40685795:+|nuORF;nc|ENSG00000128944|Q9Y448-2|KNSTRN;nc|ENSG00000128944|Q9Y448-3|KNSTRN	77.31757898189308	0.1091473830098891	2				NaN	NaN	0	NaN	602	2303	2904
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2908	13.106	NaN	12907	30	0	1789.5	0.106	+			34340	RTQAAAVQK	9	77	486.782210749741	971.549868566282	2	486.7815246582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RTQAAAVQK_	ARHGAP28|p.F355Lfs*8|2|0.4|ENSG00000088756|chr18:6873514-6873514|T/-|frameshift_variant;ARHGAP28|p.G328Wfs*4|1|0.21|ENSG00000088756|chr18:6873432-6873433|-/T|frameshift_variant;ARHGAP28|p.R364Gfs*7|1|0.08|ENSG00000088756|chr18:6873541-6873541|A/-|frameshift_variant;ENSG00000088756|ENST00000383472|ARHGAP28;ENSG00000146376|ENST00000368149|ARHGAP18;nc|ENSG00000088756|Q9P2N2-2|ARHGAP28;nc|ENSG00000146376|Q8N392-2|ARHGAP18	134.7655990226056	0.012935733000282069	2				NaN	NaN	0	NaN	603	2303	2904
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2909	13.108	NaN	425.63	30	0	40.08	0.106	+			7465	DGAALTKK	8	34	402.2345886230469	NaN	0	402.2345886230469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DGAALTKK_	ENSG00000159450|ENST00000614923|TCHH	35.61828744233558	1.7418937515398478	2				NaN	NaN	0	NaN	604	2303	2904
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2910	13.11	NaN	864.78	30	0	137.69	0.035				-1	NAFMECQK	8	39	514.2206420898438	NaN	0	514.2206420898438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_NAFMEC(Carbamidomethyl (C))QK_	GTF3C1|p.K1466N|1|0.18|ENSG00000077235|chr16:27471876-27471876|C/A|missense_variant	24.20275056022122	1.7418937515398478	2				NaN	NaN	0	NaN	605	2303	2904
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2911	13.11	NaN	473.48	30	0	79.81	0.14	+			37196	SKDDRERI	8	30	509.76715087890625	NaN	0	509.76715087890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SKDDRERI_	ENST00000239882.6_2_13:41556404-41593421:-|nuORF	14.137123925751023	1.7418937515398478	2				NaN	NaN	0	NaN	606	2303	2904
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2923	13.137	NaN	842.88	30	0	95.82	0.214				-1	LCLPCPSSH	9	35	535.7435302734375	NaN	0	535.7435302734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_LC(Carbamidomethyl (C))LPC(Carbamidomethyl (C))PSSH_	ENSG00000106331|ENST00000639438|PAX4;nc|ENSG00000106331|O43316-4|PAX4	26.79610172149135	0.34227917631780574	2				NaN	NaN	0	NaN	615	2306	2922
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2924	13.141	NaN	543.07	30	0	68.814	0.106			+	1680	AGSSSKLR	8	25	403.2296447753906	NaN	0	403.2296447753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AGSSSKLR_	REV__ENST00000540725.5_1_11:62623143-62623200:-|nuORF	23.04248740728303	1.7418937515398478	2				NaN	NaN	0	NaN	616	2306	2922
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2925	13.143	NaN	431.08	30	0	142.29	0.106			+	11544	FPGWIVYI	8	23	497.7731628417969	NaN	0	497.7731628417969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FPGWIVYI_	REV__ENSG00000184005|ENST00000328299|ST6GALNAC3;REV__nc|ENSG00000184005|Q8NDV1-2|ST6GALNAC3	16.704963439144045	1.7418937515398478	2				NaN	NaN	0	NaN	617	2306	2922
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2926	13.145	NaN	556.44	30	0	320.78	0.106	+			50189	WLNPIQRNL	9	23	385.2193603515625	NaN	0	385.2193603515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_WLNPIQRNL_	ENSG00000196867|ENST00000301318|ZFP28;nc|ENSG00000196867|Q8NHY6-2|ZFP28;ZFP28|p.K559Nfs*50|1|0.36|ENSG00000196867|chr19:56554458-56554458|A/-|frameshift_variant	15.641811463095205	0.38404136392510424	2				NaN	NaN	0	NaN	618	2306	2922
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2927	13.146	NaN	1060.5	30	0	249.47	0.034				-1	 	0	41	478.766747053347	955.518941173494	2	479.7008361816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	619	2306	2922
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2939	13.172	NaN	83985	30	0	62120	0.214				-1	 	0	54	485.30750610073636	968.6004592682727	2	485.30792236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	628	2309	2938
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2940	13.176	NaN	6877.9	30	0	2038.2	0.106	+			39570	STGKTGRAGDQ	11	39	359.84850549331287	1076.5236870801386	3	359.84893798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STGKTGRAGDQ_	ENSG00000148399|ENST00000277540|DPH7;ENST00000479650.5_1_9:140459535-140473096:-|nuORF	21.780426970141523	0.7613322811393133	2				NaN	NaN	0	NaN	629	2309	2938
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2941	13.177	NaN	1475.3	30	0	202.79	0.106				-1	 	0	44	508.2492229214047	507.2419464548047	1	508.2497863769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	630	2309	2938
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2942	13.179	NaN	1417.3	30	0	222.68	0.106	+			22285	KTDKQPLQK	9	48	543.318949145531	1084.6233453578618	2	543.320556640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTDKQPLQK_	ENSG00000133706|ENST00000394434|LARS1;nc|ENSG00000133706|Q9P2J5-2|LARS1;nc|ENSG00000133706|Q9P2J5-3|LARS1	95.81516180277367	0.04847050768394289	2				NaN	NaN	0	NaN	631	2309	2938
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2943	13.181	NaN	3741.5	30	0	771.85	0.106				-1	 	0	35	376.55083526997765	1126.630676410133	3	376.5513000488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	632	2309	2938
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2944	13.183	NaN	10168	30	0	4760.4	0.106				-1	 	0	61	478.766747053347	955.518941173494	2	478.7660827636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	633	2309	2938
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2945	13.185	NaN	2800.1	30	0	287.14	0.035	+			19567	KCSKPNVQK	9	55	516.2861759481076	1030.557798963015	2	516.2870483398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KCSKPNVQK_	ENSG00000113328|ENST00000340828|CCNG1;nc|ENSG00000113328|P51959-2|CCNG1	98.58198989935565	0.04066992115528678	2				NaN	NaN	0	NaN	634	2309	2938
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2956	13.209	NaN	7460.5	30	0	3760.9	0.214				-1	 	0	51	496.2985689257644	990.5825849183288	2	496.2989807128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	642	2312	2955
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2957	13.213	NaN	1413.3	30	0	293.28	0.106	+			31395	QKKKAKSQQ	9	53	537.3242057279583	1072.6338585227165	2	537.3248901367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QKKKAKSQQ_	ENSG00000011258|ENST00000586178|MBTD1;ENST00000586898.1_1_17:49269519-49270175:-|nuORF;MBTD1|p.K585N|1|0.35|ENSG00000011258|chr17:51192216-51192216|T/G|missense_variant	52.936696900407355	0.27249468807391813	2				NaN	NaN	0	NaN	643	2312	2955
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2958	13.215	NaN	2406	30	0	524.99	0.106				-1	 	0	50	474.27908071805786	946.5436085029157	2	474.2791442871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	644	2312	2955
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2959	13.217	NaN	3138	30	0	532.93	0.106	+			38441	SSALNTHK	8	55	429.22683749285994	856.4391220525199	2	429.22735595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSALNTHK_	ENSG00000152926|ENST00000282869|ZNF117;ENSG00000184635|ENST00000343769|ZNF93;nc|ENSG00000184635|P35789-2|ZNF93;nc|ENSG00000184635|P35789-3|ZNF93;ZNF93|p.R221I|1|0.35|ENSG00000184635|chr19:19933617-19933617|G/T|missense_variant	87.75429964447693	0.2842685068779738	2				NaN	NaN	0	NaN	645	2312	2955
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2960	13.219	NaN	7087.7	30	0	3212.3	0.106	+			21717	KQKKPLVGK	9	51	342.5655243150983	1024.674743545495	3	342.5655517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KQKKPLVGK_	ENSG00000174444|ENST00000307961|RPL4;ENST00000422486.1_1_3:185135285-185135612:-|nuORF;ENST00000567229.5_1_15:66791747-66793486:-|nuORF	58.78195531508484	0.22376836668196862	2				NaN	NaN	0	NaN	646	2312	2955
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2961	13.22	NaN	756.55	30	0	169.15	0.037			+	43519	TGSSGLPKMIQ	11	20	373.53502514354926	NaN	0	373.5351257324219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TGSSGLPKMIQ_	REV__ITSN1|p.T1493M|1|0.39|ENSG00000205726|chr21:33882379-33882379|C/T|missense_variant	13.507942900623993	0.456735970842152	2				NaN	NaN	0	NaN	647	2312	2955
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2962	13.221	NaN	242.46	30	0	38.689	0.139			+	46502	VEVAGTPSR	9	22	458.2479248046875	NaN	0	458.2479248046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VEVAGTPSR_	REV__ENSG00000103855|ENST00000318443|CD276;REV__nc|ENSG00000103855|Q5ZPR3-3|CD276;REV__nc|ENSG00000103855|Q5ZPR3-4|CD276	14.864876125193954	0.3866709117995958	2				NaN	NaN	0	NaN	648	2312	2955
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2974	13.248	NaN	19700	30	0	2820.1	0.215				-1	 	0	79	443.22445251556906	884.4343520979381	2	443.2247619628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	657	2315	2973
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2975	13.251	NaN	30102	30	0	5753.1	0.106	+			22833	KVGRDVVQK	9	87	514.8135769228719	1027.6126009125437	2	514.81396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVGRDVVQK_	ENSG00000133392|ENST00000300036|MYH11;nc|ENSG00000133392|P35749-2|MYH11;nc|ENSG00000133392|P35749-3|MYH11;nc|ENSG00000133392|P35749-4|MYH11	90.60085204095205	0.06317133949006545	2				NaN	NaN	0	NaN	658	2315	2973
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2976	13.253	NaN	2226.3	30	0	394.72	0.106	+			39606	STHHTDGLSK	10	46	541.7654801139421	NaN	0	541.765380859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STHHTDGLSK_	ENSG00000112701|ENST00000447266|SENP6;nc|ENSG00000112701|Q9GZR1-2|SENP6;SENP6|p.G1004Efs*11|4|0.34|ENSG00000112701|chr6:75713700-75713700|A/-|frameshift_variant	101.25262130126117	0.011307420405424463	2				NaN	NaN	0	NaN	659	2315	2973
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2977	13.255	NaN	6417.3	30	0	1527.6	0.106	+			34201	RTDKPYSAK	9	71	533.2884421514389	1064.5623313696776	2	533.2879638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RTDKPYSAK_	ENSG00000189143|ENST00000340958|CLDN4	92.23892857375223	0.05855307001735979	2				NaN	NaN	0	NaN	660	2315	2973
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2978	13.257	NaN	1447.5	30	0	161.55	0.106			+	-1	LNEMNMRM	8	50	527.7274767844029	NaN	0	527.7273559570312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_LNEMNMRM(Oxidation (M))_	REV__ENSG00000170788|ENST00000372202|DYDC1;REV__nc|ENSG00000170788|Q8WWB3-2|DYDC1	24.20275056022122	1.7418937515398478	2				NaN	NaN	0	NaN	661	2315	2973
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2979	13.259	NaN	663.77	30	0	150.11	0.106				-1	 	0	39	489.7573565349647	977.5001601367294	2	489.7577819824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	662	2315	2973
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2980	13.26	NaN	880.08	30	0	225.89	0.034	+			17141	HSSQVSYQ	8	35	468.21412564160323	934.4136983500065	2	468.2143249511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HSSQVSYQ_	ENST00000264156.2_1_2:136598161-136598251:-|nuORF	23.04248740728303	0.7814162927298575	2				NaN	NaN	0	NaN	663	2315	2973
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2991	13.286	NaN	12203	30	0	2043.2	0.214			+	-1	LMALLKWR	8	71	349.54466828231864	1045.612175447156	3	349.5450439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LM(Oxidation (M))ALLKWR_	REV__ENSG00000110080|ENST00000444328|ST3GAL4;REV__nc|ENSG00000110080|Q11206-4|ST3GAL4;REV__nc|ENSG00000110080|Q11206-5|ST3GAL4	40.5726180659479	0.6527593143185008	2				NaN	NaN	0	NaN	671	2318	2990
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2992	13.289	NaN	4161.3	30	0	1065.5	0.106	+			19474	KASSSLPKK	9	53	473.2896343904236	944.5647158476472	2	473.2896423339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KASSSLPKK_	ENSG00000104979|ENST00000588234|C19orf53;ENST00000588858.5_1_19:13886394-13889009:+|nuORF	117.81106730687013	0.02252488733980868	2				NaN	NaN	0	NaN	672	2318	2990
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2993	13.291	NaN	2604.5	30	0	728.88	0.106	+			424	AATKKVVQQL	10	62	543.3368946876784	1084.6592364421567	2	543.3380126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AATKKVVQQL_	nc|ENSG00000133136|A0A804HLA8|GNG5B	32.81241826257853	0.6118718159329168	2				NaN	NaN	0	NaN	673	2318	2990
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2994	13.293	NaN	3952.7	30	0	748.82	0.106	+			28337	NEHRGSQAV	9	58	499.2436977666118	996.4728426000236	2	499.2442321777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NEHRGSQAV_	ENSG00000275395|ENST00000616721|FCGBP;ENSG00000275395|ENST00000616721|FCGBP;FCGBP-ACSS2|1|fusion;FCGBP-ACSS2|1|fusion;nc|ENSG00000275395|Q9Y6R7|FCGBP;nc|ENSG00000275395|Q9Y6R7|FCGBP;nc|ENSG00000275395|Q9Y6R7|FCGBP	72.87924865735499	0.12833875048249987	2				NaN	NaN	0	NaN	674	2318	2990
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2995	13.295	NaN	7253.2	30	0	4595.2	0.106				-1	 	0	56	525.8043162490217	1049.5940795648432	2	525.805419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	675	2318	2990
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2996	13.297	NaN	2014.2	30	0	413.81	0.035				-1	 	0	46	501.82400471734826	1001.6334565014965	2	501.82452392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	676	2318	2990
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2997	13.297	NaN	2804.9	30	0	528.52	0.144			+	9519	EKYIDQPLG	9	39	354.85223388671875	NaN	0	354.85223388671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EKYIDQPLG_	REV__nc|ENSG00000124215|Q8IXH8-1|CDH26	31.529811441608018	0.3183796599642538	2				NaN	NaN	0	NaN	677	2318	2990
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3009	13.324	NaN	12716	30	0	2092.1	0.214	+			48621	VTSGAVAFGKQ	11	74	532.7909384480048	1063.5673239628095	2	532.7922973632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTSGAVAFGKQ_	ENSG00000059573|ENST00000371224|ALDH18A1;nc|ENSG00000059573|P54886-2|ALDH18A1	62.107414245175825	0.30464354921554965	2				NaN	NaN	0	NaN	686	2321	3008
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3010	13.328	NaN	18223	30	0	4200.4	0.106			+	48387	VTHTNIPTH	9	63	510.26691646289675	1018.5192799925935	2	510.2670593261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTHTNIPTH_	REV__ENST00000313349.3_1_2:64862240-64862327:-|nuORF	82.30502934623384	0.08758161712619916	2				NaN	NaN	0	NaN	687	2321	3008
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3011	13.33	NaN	10651	30	0	2639.4	0.106	+			40427	STVKENMKK	9	58	355.5300546036108	1063.5683344110323	3	355.5303649902344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STVKENMKK_	ENST00000590996.5_2_17:41329998-41338351:+|nuORF	47.657333605630114	0.33044192980041115	2				NaN	NaN	0	NaN	688	2321	3008
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3012	13.332	NaN	1046.9	30	0	214.38	0.106			+	-1	MHWWAQSTKY	10	34	451.873291015625	NaN	0	451.873291015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_M(Oxidation (M))HWWAQSTKY_	REV__AluSp_dup17171|chr6:42956085-42956345:+|2.9082291479174875|0.2092895351215914|3.8|479.0|9|3|sense	24.519189625965996	0.41966695327750003	2				NaN	NaN	0	NaN	689	2321	3008
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3013	13.334	NaN	734.78	30	0	151.08	0.106	+			15129	GTRWVKAGKT	10	34	368.5498962402344	NaN	0	368.5498962402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTRWVKAGKT_	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42|TTN;TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;TTN|p.D20259Rfs*40|1|0.44|ENSG00000155657|chr2:178583105-178583106|-/T|frameshift_variant;TTN|p.D21555Ifs*6|1|0.33|ENSG00000155657|chr2:178576659-178576659|G/-|frameshift_variant;TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;TTN|p.E20392Dfs*6|1|0.04|ENSG00000155657|chr2:178582357-178582358|-/TTTAAAATTA|frameshift_variant;TTN|p.E20392Kfs*4|1|0.02|ENSG00000155657|chr2:178582359-178582360|-/TTTT|frameshift_variant;TTN|p.F18705Lfs*8|1|0.37|ENSG00000155657|chr2:178590687-178590687|A/-|frameshift_variant;TTN|p.G19920Afs*12|1|0.42|ENSG00000155657|chr2:178584961-178584961|G/-|frameshift_variant;TTN|p.G22029Efs*22|2|0.13|ENSG00000155657|chr2:178575125-178575125|T/-|frameshift_variant;TTN|p.I24998Nfs*2|1|0.35|ENSG00000155657|chr2:178566216-178566217|-/T|frameshift_variant;TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;TTN|p.K26626Nfs*34|1|0.34|ENSG00000155657|chr2:178561331-178561331|T/-|frameshift_variant;TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant;TTN|p.N15496Ifs*16|1|0.09|ENSG00000155657|chr2:178610116-178610116|T/-|frameshift_variant;TTN|p.P16126Rfs*3|1|0.25|ENSG00000155657|chr2:178607301-178607302|TG/-|frameshift_variant;TTN|p.P22810Hfs*10|1|0.03|ENSG00000155657|chr2:178572780-178572781|-/AAAT|frameshift_variant;TTN|p.V22573Cfs*4|2|0.31|ENSG00000155657|chr2:178573492-178573492|C/-|frameshift_variant;TTN|p.V27442Cfs*4|1|0.05|ENSG00000155657|chr2:178558107-178558108|-/A|frameshift_variant	26.063383197487333	0.4145965855542893	2				NaN	NaN	0	NaN	690	2321	3008
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3014	13.335	NaN	433.16	30	0	153.86	0.036			+	33586	RLLPGYQQK	9	24	551.8214721679688	NaN	0	551.8214721679688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RLLPGYQQK_	REV__nc|ENSG00000143882|Q8NEY4-2|ATP6V1C2	11.511019455917149	0.3980220838287494	2				NaN	NaN	0	NaN	691	2321	3008
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3025	13.361	NaN	3074.4	30	0	279.06	0.214	+			34158	RTAHNAIEK	9	63	520.2853508274947	1038.5561487217892	2	520.2860107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTAHNAIEK_	ENSG00000072310|ENST00000261646|SREBF1;ENST00000470247.1_1_17:17721556-17722545:-|nuORF;nc|ENSG00000072310|P36956-2|SREBF1;nc|ENSG00000072310|P36956-3|SREBF1;nc|ENSG00000072310|P36956-4|SREBF1;nc|ENSG00000072310|P36956-5|SREBF1;nc|ENSG00000072310|P36956-6|SREBF1	89.02883481214508	0.06760336634167786	2				NaN	NaN	0	NaN	699	2324	3024
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3026	13.364	NaN	8982.8	30	0	2311.1	0.106			+	32529	QVRCSVKH	8	67	507.2684540866429	1012.5223552400859	2	507.2688903808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_QVRC(Carbamidomethyl (C))SVKH_	REV__ENST00000464316.5_1_3:156870794-156871031:-|nuORF;REV__ENST00000467081.1_1_3:156870794-156876755:-|nuORF	98.62937762414208	0.25143494708580966	2				NaN	NaN	0	NaN	700	2324	3024
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3027	13.366	NaN	510.66	30	0	161.22	0.106			+	7985	DSYFFKRR	8	20	559.7904877652937	NaN	0	559.7903442382812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DSYFFKRR_	REV__ENSG00000137076|ENST00000314888|TLN1;REV__ENSG00000171914|ENST00000636159|TLN2;REV__ENST00000378192.2_1_9:35723947-35725691:-|nuORF;REV__nc|ENSG00000137076|Q9Y490-2|TLN1;REV__TLN1|p.P1628Rfs*20|1|0.44|ENSG00000137076|chr9:35707144-35707144|G/-|frameshift_variant;REV__TLN1|p.S405Afs*84|1|0.3|ENSG00000137076|chr9:35720503-35720503|T/-|frameshift_variant	12.959181472943097	1.7418937515398478	2				NaN	NaN	0	NaN	701	2324	3024
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3028	13.368	NaN	3894	30	0	591.83	0.106				-1	 	0	63	452.7579089282882	903.5012649233764	2	452.7583923339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	702	2324	3024
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3029	13.37	NaN	4583.5	30	0	2163.1	0.106				-1	STPSHPCNK	9	36	343.1598081134647	1026.4575949405942	3	343.1600646972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_STPSHPC(Carbamidomethyl (C))NK_	ENST00000374580.8_1_2:203424748-203424802:+|nuORF	25.57405402267927	0.5642445186134241	2				NaN	NaN	0	NaN	703	2324	3024
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3030	13.372	NaN	964.66	30	0	311.38	0.037			+	20218	KELIEKELL	9	33	372.22760009765625	NaN	0	372.22760009765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KELIEKELL_	REV__ENSG00000114124|ENST00000682958|GRK7	29.170058357718403	0.3302935627494407	2				NaN	NaN	0	NaN	704	2324	3024
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3031	13.372	NaN	2243	30	0	312.44	0.141	+			2947	ASDPSEKVKK	10	35	363.5360978441846	1087.586464132754	3	363.5364990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASDPSEKVKK_	ENSG00000119321|ENST00000238256|FKBP15;nc|ENSG00000119321|Q5T1M5-2|FKBP15	36.446750945000026	0.5818864909973037	2				NaN	NaN	0	NaN	705	2324	3024
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3042	13.399	NaN	7110.4	30	0	2620.5	0.214			+	-1	STCKFEFSPP	10	51	400.517699315934	1198.5312685480021	3	400.5179748535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_STC(Carbamidomethyl (C))KFEFSPP_	REV__ENSG00000182606|ENST00000327628|TRAK1	22.579656572578934	0.6954366826851017	2				NaN	NaN	0	NaN	713	2327	3041
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3043	13.403	NaN	1603.1	30	0	491.31	0.106			+	32057	QRVRERKK	8	35	550.3460693359375	NaN	0	550.3460693359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QRVRERKK_	REV__ENSG00000127804|ENST00000263092|METTL16	27.882242232435846	1.7418937515398478	2				NaN	NaN	0	NaN	714	2327	3041
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3044	13.405	NaN	4610.2	30	0	396.33	0.106	+			2570	AQDKSVVNK	9	70	494.77518916377534	987.5358253943507	2	494.7748107910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AQDKSVVNK_	ENSG00000003147|ENST00000402384|ICA1;ICA1|p.E307Lfs*26|1|0.05|ENSG00000003147|chr7:8141801-8141802|-/TTTTTCAA|frameshift_variant;ICA1|p.N204Tfs*5|2|0.36|ENSG00000003147|chr7:8158621-8158621|T/-|frameshift_variant;nc|ENSG00000003147|Q05084-2|ICA1;nc|ENSG00000003147|Q05084-3|ICA1	128.60217544463768	0.015992218256422188	2				NaN	NaN	0	NaN	715	2327	3041
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3045	13.407	NaN	2238.3	30	0	344.61	0.106				-1	 	0	49	431.7604068171899	861.5062607011798	2	431.7608642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	716	2327	3041
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3046	13.409	NaN	1389.2	30	0	281.63	0.106				-1	 	0	45	391.2102521980945	1170.6089271944836	3	391.2105712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	717	2327	3041
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3047	13.41	NaN	12314	30	0	4820.4	0.037	+			39307	STASWMPSLY	10	48	381.5103504177988	1141.5092218535965	3	381.51068115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STASWMPSLY_	CADPS2|p.D1011Nfs*3|1|0.04|ENSG00000081803|chr7:122388716-122388717|-/ATGTATT|frameshift_variant;CADPS2|p.N1185Tfs*15|1|0.4|ENSG00000081803|chr7:122345632-122345632|T/-|frameshift_variant;ENSG00000081803|ENST00000449022|CADPS2	27.882242232435846	0.6521336255503853	2				NaN	NaN	0	NaN	718	2327	3041
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3048	13.411	NaN	1328.5	30	0	373.22	0.141			+	48930	VVDYVMYR	8	27	354.17717271132824	NaN	0	354.1771545410156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_VVDYVM(Oxidation (M))YR_	REV__ENSG00000165506|ENST00000298292|DNAAF2;REV__nc|ENSG00000165506|Q9NVR5-2|DNAAF2	40.5726180659479	1.7418937515398478	2				NaN	NaN	0	NaN	719	2327	3041
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3059	13.438	NaN	17829	30	0	2707.3	0.214	+			26894	LWSRALCVQL	10	73	396.8906985164481	NaN	0	396.8907470703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LWSRALCVQL_	ENST00000606514.5_1_6:143754970-143755018:-|nuORF	40.05817265558897	0.3684561582319974	2				NaN	NaN	0	NaN	727	2330	3058
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3060	13.442	NaN	2754.5	30	0	1200.7	0.106			+	-1	STPPVMPLAT	10	29	343.84877859919106	NaN	0	343.8487854003906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_STPPVM(Oxidation (M))PLAT_	REV__ENSG00000110427|ENST00000658780|KIAA1549L;REV__nc|ENSG00000110427|Q6ZVL6|KIAA1549L	23.52269567125451	0.42010282974921537	2				NaN	NaN	0	NaN	728	2330	3058
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3061	13.444	NaN	4866.1	30	0	1220.1	0.106	+			3156	ASIGSPKRK	9	58	472.28739664215004	942.5602403511001	2	472.28759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASIGSPKRK_	ENSG00000122870|ENST00000373886|BICC1;nc|ENSG00000122870|Q9H694-2|BICC1	72.87924865735499	0.12833875048249987	2				NaN	NaN	0	NaN	729	2330	3058
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3062	13.445	NaN	4198.4	30	0	1512.9	0.106	+			40124	STPSRPSSAK	10	53	509.26937588749286	1016.5241988417857	2	509.269775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STPSRPSSAK_	ENSG00000166974|ENST00000300249|MAPRE2;nc|ENSG00000166974|Q15555-2|MAPRE2;nc|ENSG00000166974|Q15555-3|MAPRE2;nc|ENSG00000166974|Q15555-4|MAPRE2;nc|ENSG00000166974|Q15555-5|MAPRE2	53.08895987439943	0.42869529153390606	2				NaN	NaN	0	NaN	730	2330	3058
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3063	13.447	NaN	10321	30	0	1976.1	0.106	+			40045	STNKISTAK	9	70	475.26877326863985	948.5229936040797	2	475.2689514160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STNKISTAK_	ENSG00000137033|ENST00000682010|IL33;ENST00000463336.1_1_9:6241694-6242202:+|nuORF;nc|ENSG00000137033|O95760-2|IL33;nc|ENSG00000137033|O95760-3|IL33;nc|ENSG00000137033|O95760-4|IL33	96.66504779109242	0.04607440320619715	2				NaN	NaN	0	NaN	731	2330	3058
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3064	13.449	NaN	1446.8	30	0	222.05	0.035	+			30747	QDLPLLLLP	9	47	511.3170517414397	NaN	0	511.31695556640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QDLPLLLLP_	ENST00000413209.6_1_22:30090794-30090923:+|nuORF	30.503639358989545	0.3235605894931338	2				NaN	NaN	0	NaN	732	2330	3058
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3065	13.45	NaN	498.64	30	0	133.39	0.141			+	25694	LRKLRQGQV	9	22	549.3491821289062	NaN	0	549.3491821289062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LRKLRQGQV_	REV__ENST00000528986.1_1_11:121962353-121971085:-|nuORF	7.193352174278301	0.40727630907727536	2				NaN	NaN	0	NaN	733	2330	3058
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3078	13.478	NaN	1538.5	30	0	302.44	0.214			+	38379	SRSRSRNK	8	54	495.78192138671875	NaN	0	495.78192138671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SRSRSRNK_	REV__ENST00000431066.5_1_2:38972277-38975875:-|nuORF;REV__ENST00000443213.5_1_2:38972277-38975875:-|nuORF;REV__ENST00000487773.1_1_2:38972277-38975875:-|nuORF	51.33545320467046	1.7418937515398478	2				NaN	NaN	0	NaN	743	2333	3077
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3079	13.482	NaN	4205.6	30	0	975.35	0.106				-1	 	0	59	486.751849086043	971.4891452388861	2	486.75238037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	744	2333	3077
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3080	13.484	NaN	2838.7	30	0	491.82	0.106	+			16327	HEKQEKGTL	9	54	535.2846514830555	1068.554750032911	2	535.285400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HEKQEKGTL_	ENSG00000121931|ENST00000369763|LRIF1;nc|ENSG00000121931|Q5T3J3-2|LRIF1	145.46060221211434	0.007927189773590037	2				NaN	NaN	0	NaN	745	2333	3077
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3081	13.486	NaN	594.99	30	0	110.35	0.036	+			17165	HTLFSNVQR	9	26	551.2921142578125	NaN	0	551.2921142578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HTLFSNVQR_	ARHGEF15|p.L618Rfs*24|1|0.38|ENSG00000198844|chr17:8318643-8318643|T/-|frameshift_variant;ENSG00000198844|ENST00000361926|ARHGEF15	21.9598887501803	0.3626577482100488	2				NaN	NaN	0	NaN	746	2333	3077
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3092	13.51	NaN	1277.6	30	0	571.94	0.143			+	12693	GEKIWSTAL	9	31	335.5172871382421	NaN	0	335.5172119140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEKIWSTAL_	REV__ENST00000409196.7_2_2:233651983-233655462:+|nuORF;REV__ENST00000409547.5_2_2:233651983-233655408:+|nuORF	32.81241826257853	0.3119040447479903	2				NaN	NaN	0	NaN	754	2336	3091
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3103	13.537	NaN	3261.2	30	0	783.05	0.214	+			19826	KEDRDSVK	8	57	488.75654561051124	NaN	0	488.75628662109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEDRDSVK_	ZNF671|p.G225D|1|0.18|ENSG00000083814|chr19:57721412-57721412|C/T|missense_variant	101.25262130126117	1.7418937515398478	2				NaN	NaN	0	NaN	762	2339	3102
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3104	13.541	NaN	1972.5	30	0	240.76	0.106	+			18391	IRISLRNQ	8	55	500.30595003793456	998.5973471426692	2	500.3064270019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IRISLRNQ_	ENSG00000157680|ENST00000614521|DGKI;nc|ENSG00000157680|O75912|DGKI	35.61828744233558	0.6843154725607303	2				NaN	NaN	0	NaN	763	2339	3102
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3105	13.543	NaN	902.46	30	0	122.32	0.106	+			8278	EAIAVCLHIQ	10	33	548.7973959894217	NaN	0	548.7974243164062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EAIAVCLHIQ_	ADAMTSL3|p.F1172Yfs*20|1|0.12|ENSG00000156218|chr15:83983142-83983143|-/A|frameshift_variant;ADAMTSL3|p.H1300Ifs*18|1|0.33|ENSG00000156218|chr15:83991138-83991138|C/-|frameshift_variant;ADAMTSL3|p.N1166Kfs*26|1|0.4|ENSG00000156218|chr15:83983119-83983120|-/A|frameshift_variant;ADAMTSL3|p.R1207Gfs*32|1|0.3|ENSG00000156218|chr15:83983243-83983243|A/-|frameshift_variant;ENSG00000156218|ENST00000286744|ADAMTSL3;ENST00000561483.5_1_15:84323016-84694242:+|nuORF;nc|ENSG00000156218|P82987-2|ADAMTSL3	40.77816245573522	0.36390427802201647	2				NaN	NaN	0	NaN	764	2339	3102
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3106	13.545	NaN	4714.6	30	0	2175.2	0.106	+			22463	KTLSPRTLQ	9	44	348.5451098902087	NaN	0	348.54498291015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTLSPRTLQ_	ENSG00000148120|ENST00000375315|AOPEP;ENST00000460573.5_1_9:97767442-97823116:+|nuORF;ENST00000463372.5_1_9:97767418-97844994:+|nuORF;ENST00000468164.1_1_9:97818730-97844994:+|nuORF;nc|ENSG00000148120|Q8N6M6-2|AOPEP;nc|ENSG00000148120|Q8N6M6-4|AOPEP	61.691277971877994	0.14210560126578747	2				NaN	NaN	0	NaN	765	2339	3102
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3107	13.547	NaN	2943.1	30	0	900.49	0.106			+	-1	GVFQMAPR	8	54	461.23531111168546	920.456069290171	2	461.2357482910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_GVFQM(Oxidation (M))APR_	REV__ENSG00000203995|ENST00000371528|ZYG11A	52.29916861842294	0.578018602984656	2				NaN	NaN	0	NaN	766	2339	3102
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3108	13.548	NaN	1168.9	30	0	756.93	0.106				-1	 	0	28	485.30750610073636	968.6004592682727	2	485.3078918457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	767	2339	3102
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3109	13.55	NaN	2433	30	0	366.27	0.037				-1	 	0	36	376.55083526997765	1126.630676410133	3	376.5516662597656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	768	2339	3102
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3120	13.575	NaN	4518.5	30	0	1037.5	0.214	+			37437	SLHPWYGIT	9	42	358.5199165311104	1072.5379201935314	3	358.8492431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLHPWYGIT_	ENSG00000100139|ENST00000215957|MICALL1	31.529811441608018	0.5085848003137583	2				NaN	NaN	0	NaN	776	2342	3119
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3121	13.579	NaN	1586.9	30	0	611.58	0.106			+	7716	DLRWYRRK	8	36	398.22764567588194	NaN	0	398.2278137207031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DLRWYRRK_	REV__PRKD1|p.H442R|1|0.22|ENSG00000184304|chr14:29632936-29632936|T/C|missense_variant	29.14955571784316	1.7418937515398478	2				NaN	NaN	0	NaN	777	2342	3119
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3122	13.581	NaN	602.96	30	0	151.07	0.037	+			21962	KSDHKYRR	8	26	363.8685302734375	NaN	0	363.8685302734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KSDHKYRR_	ENST00000470889.5_1_3:138341046-138341142:+|nuORF	12.959181472943097	1.7418937515398478	2				NaN	NaN	0	NaN	778	2342	3119
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3133	13.606	NaN	3700.9	30	0	1851.6	0.214	+			37259	SLAAVGISKK	10	38	325.2061767578125	NaN	0	325.2061767578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLAAVGISKK_	ENST00000473262.5_1_3:124837626-124909342:-|nuORF	35.61828744233558	0.3832230071539346	2				NaN	NaN	0	NaN	786	2345	3132
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3134	13.61	NaN	2252.2	30	0	373.69	0.106	+			37436	SLHPQVTH	8	48	459.742919921875	NaN	0	459.742919921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLHPQVTH_	ENSG00000109756|ENST00000691494|RAPGEF2;nc|ENSG00000109756|Q9Y4G8|RAPGEF2;RAPGEF2|p.H487Tfs*21|1|0.06|ENSG00000109756|chr4:159332499-159332499|C/-|frameshift_variant;RAPGEF2|p.S522Vfs*12|5|0.29|ENSG00000109756|chr4:159332603-159332603|A/-|frameshift_variant	44.116797842482775	1.7418937515398478	2				NaN	NaN	0	NaN	787	2345	3132
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3135	13.612	NaN	2771	30	0	356.76	0.106			+	21137	KKSSHSVKK	9	59	514.8135769228719	1027.6126009125437	2	514.814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KKSSHSVKK_	REV__ENSG00000116731|ENST00000311066|PRDM2;REV__nc|ENSG00000116731|Q13029-2|PRDM2;REV__nc|ENSG00000116731|Q13029-3|PRDM2;REV__nc|ENSG00000116731|Q13029-5|PRDM2;REV__PRDM2|p.P1648Qfs*14|1|0.24|ENSG00000116731|chr1:13782731-13782731|G/-|frameshift_variant	51.19269402634007	0.2889735674168909	2				NaN	NaN	0	NaN	788	2345	3132
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3136	13.614	NaN	2294.7	30	0	597.44	0.106			+	31937	QQQFAVKK	8	50	488.783869893137	NaN	0	488.7838439941406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QQQFAVKK_	REV__ENST00000515578.5_1_4:420284-429666:-|nuORF	90.77665401227738	1.7418937515398478	2				NaN	NaN	0	NaN	789	2345	3132
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3137	13.615	NaN	1636.7	30	0	216.86	0.106				-1	 	0	45	474.27908071805786	946.5436085029157	2	474.27911376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	790	2345	3132
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3138	13.617	NaN	1898.9	30	0	397.26	0.106			+	19450	KARGAAATP	9	48	421.7453551092912	841.4761572853824	2	421.7457580566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KARGAAATP_	REV__ENST00000521478.1_1_7:27186941-27190216:-|nuORF;REV__HOXA6|p.A76Pfs*68|1|0.31|ENSG00000106006|chr7:27147524-27147524|C/-|frameshift_variant	44.116797842482775	0.37197099687881774	2				NaN	NaN	0	NaN	791	2345	3132
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3139	13.619	NaN	13576	30	0	3738.3	0.034			+	39825	STLKAEKGQ	9	59	481.26875546604015	960.5229579988803	2	481.26922607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STLKAEKGQ_	REV__ENSG00000221843|ENST00000447166|C2orf16	99.37495909608758	0.03983967222258828	2				NaN	NaN	0	NaN	792	2345	3132
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3152	13.646	NaN	2892.6	30	0	437.32	0.214	+			34411	RTSSSTQLK	9	59	504.27686316429896	1006.5391733953979	2	504.2772521972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTSSSTQLK_	ENSG00000163138|ENST00000503585|PACRGL;nc|ENSG00000163138|Q8N7B6-2|PACRGL;nc|ENSG00000163138|Q8N7B6-3|PACRGL;nc|ENSG00000163138|Q8N7B6-4|PACRGL	104.01359247289065	0.03510646158778409	2				NaN	NaN	0	NaN	802	2348	3151
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3153	13.65	NaN	2408	30	0	202.51	0.106				-1	PKCKCRPR	8	60	522.7806326112844	1043.5467122893688	2	522.7805786132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_PKC(Carbamidomethyl (C))KCRPR_	EP400|p.P2793Rfs*46|1|0.3|ENSG00000183495|chr12:132064707-132064707|C/-|frameshift_variant	76.84663266511073	0.3498490246073164	2				NaN	NaN	0	NaN	803	2348	3151
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3154	13.652	NaN	1514.9	30	0	433.68	0.106				-1	 	0	39	501.82400471734826	1001.6334565014965	2	501.82476806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	804	2348	3151
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3155	13.654	NaN	557.93	30	0	133.31	0.106			+	30584	QAPGTRPAMAE	11	30	564.777734515099	NaN	0	564.777587890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QAPGTRPAMAE_	REV__ENSG00000196428|ENST00000688009|TSC22D2;REV__nc|ENSG00000196428|O75157|TSC22D2	33.03940026070387	0.41817340257782254	2				NaN	NaN	0	NaN	805	2348	3151
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3156	13.656	NaN	1535.6	30	0	301.56	0.106	+			3129	ASHIASNPK	9	44	462.7484566029013	NaN	0	462.74859619140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASHIASNPK_	EMC2|p.T249Rfs*6|1|0.17|ENSG00000104412|chr8:108479044-108479044|A/-|frameshift_variant;ENSG00000104412|ENST00000220853|EMC2;ENST00000520294.5_1_8:109476316-109498824:+|nuORF	45.97224482568171	0.23445038899310136	2				NaN	NaN	0	NaN	806	2348	3151
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3157	13.657	NaN	825.52	30	0	150.22	0.035	+			30835	QEFNQKRA	8	53	510.7666309179515	1019.518708902703	2	511.2897644042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QEFNQKRA_	ENSG00000029725|ENST00000537505|RABEP1;nc|ENSG00000029725|Q15276-2|RABEP1	35.61828744233558	0.6843154725607303	2				NaN	NaN	0	NaN	807	2348	3151
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3158	13.658	NaN	572.44	30	0	69.274	0.141			+	21278	KLPIVTSTEL	10	36	550.831298828125	NaN	0	550.831298828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KLPIVTSTEL_	REV__BCOR|p.K1061Sfs*52|1|0.28|ENSG00000183337|chrX:40071029-40071029|T/-|frameshift_variant	26.063383197487333	0.4145965855542893	2				NaN	NaN	0	NaN	808	2348	3151
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3171	13.687	NaN	16709	30	0	1740.3	0.214	+			40459	STVRQNVNK	9	83	523.290853464412	1044.5671539956238	2	523.2919311523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STVRQNVNK_	ENSG00000092208|ENST00000308317|GEMIN2;ENST00000418195.1_1_3:42018516-42019344:+|nuORF;ENST00000525430.1_1_14:39583533-39591807:+|nuORF;nc|ENSG00000092208|O14893-2|GEMIN2;nc|ENSG00000092208|O14893-3|GEMIN2;nc|ENSG00000092208|O14893|GEMIN2	80.45461616416974	0.09558281504443908	2				NaN	NaN	0	NaN	818	2351	3170
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3172	13.691	NaN	9863.8	30	0	2841	0.106				-1	 	0	62	431.21867437011883	860.4227958070377	2	431.2193603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	819	2351	3170
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3173	13.693	NaN	10478	30	0	2417.4	0.106			+	22604	KTTKNQPMQ	9	61	538.2810216889592	1074.5474904447183	2	538.2830200195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KTTKNQPMQ_	REV__ENSG00000183856|ENST00000361170|IQGAP3;REV__IQGAP3|p.Q1205Sfs*31|1|0.4|ENSG00000183856|chr1:156534628-156534628|G/-|frameshift_variant	84.9155231211612	0.07920012719736333	2				NaN	NaN	0	NaN	820	2351	3170
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3174	13.694	NaN	1797.8	30	0	164.3	0.106			+	21515	KNPQVQER	8	42	499.771782294173	997.5290116551461	2	499.7726135253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KNPQVQER_	REV__UBE2E2|p.K39N|1|0.32|ENSG00000182247|chr3:23208816-23208816|G/T|missense_variant	44.116797842482775	0.6307669463330267	2				NaN	NaN	0	NaN	821	2351	3170
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3175	13.696	NaN	1928.3	30	0	450.45	0.106			+	29999	PPGVSHGPAV	10	35	459.24749755859375	NaN	0	459.24749755859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PPGVSHGPAV_	REV__ENST00000463567.5_1_7:149245928-149246012:-|nuORF	18.324413293986947	0.4201028297492154	2				NaN	NaN	0	NaN	822	2351	3170
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3176	13.698	NaN	2757.1	30	0	443.38	0.036	+			31897	QQFIQQTGT	9	56	525.7657754068655	1049.5169978805309	2	525.7669067382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QQFIQQTGT_	ENSG00000123094|ENST00000689635|RASSF8;nc|ENSG00000123094|Q8NHQ8-2|RASSF8	66.42927471994793	0.16001998865088202	2				NaN	NaN	0	NaN	823	2351	3170
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3177	13.699	NaN	1436.2	30	0	254.04	0.143	+			3125	ASGVFSKFR	9	41	333.5175476074219	NaN	0	333.5175476074219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASGVFSKFR_	ENSG00000105486|ENST00000263274|LIG1;nc|ENSG00000105486|P18858-2|LIG1;nc|ENSG00000105486|P18858-3|LIG1	35.61828744233558	0.29773779453147337	2				NaN	NaN	0	NaN	824	2351	3170
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3189	13.726	NaN	98430	30	0	34487	0.214				-1	 	0	94	427.56478715604663	1279.67253206834	3	427.56524658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	833	2354	3188
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3190	13.73	NaN	13916	30	0	2723.5	0.106	+			39102	SSSVSTVMTIG	11	64	362.1771080675348	NaN	0	362.1771240234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_SSSVSTVM(Oxidation (M))TIG_	tr|U7T0A2|U7T0A2_FUSNUPhosphate:Na+symporterOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00913PE=4SV=1	50.033510581677724	0.3150780456176802	2				NaN	NaN	0	NaN	834	2354	3188
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3191	13.732	NaN	5114.5	30	0	841.52	0.106	+			34649	RVQKKTFTK	9	69	379.2361372174214	1134.6865822524642	3	379.2364807128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RVQKKTFTK_	ENSG00000127603|ENST00000564288|MACF1;ENSG00000178209|ENST00000345136|PLEC;ENST00000467673.5_1_1:39571193-39720158:+|nuORF;MACF1|p.A5223Lfs*8|1|0.21|ENSG00000127603|chr1:39388486-39388486|G/-|frameshift_variant;MACF1|p.N4824Kfs*19|1|0.33|ENSG00000127603|chr1:39387292-39387293|-/A|frameshift_variant;MACF1|p.P924Hfs*52|1|0.23|ENSG00000127603|chr1:39303040-39303040|C/-|frameshift_variant;MACF1|p.S2157Ffs*3|1|0.37|ENSG00000127603|chr1:39333036-39333037|-/T|frameshift_variant;MACF1|p.T4896Lfs*29|1|0.27|ENSG00000127603|chr1:39387507-39387507|A/-|frameshift_variant;nc|ENSG00000127603|Q9UPN3-2|MACF1;nc|ENSG00000127603|Q9UPN3-3|MACF1;nc|ENSG00000127603|Q9UPN3-4|MACF1;nc|ENSG00000127603|Q9UPN3|MACF1;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC;PLEC|p.D223Tfs*30|1|0.47|ENSG00000178209|chr8:143938159-143938159|C/-|frameshift_variant;PLEC|p.E574Gfs*11|1|0.22|ENSG00000178209|chr8:143933305-143933306|-/C|frameshift_variant	74.1650062923329	0.12277912660386392	2				NaN	NaN	0	NaN	835	2354	3188
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3192	13.733	NaN	3074	30	0	570.13	0.106	+			38837	SSNKPAVTTK	10	60	516.7871781902675	1031.5598034473348	2	516.7880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSNKPAVTTK_	ENSG00000166197|ENST00000605788|NOLC1;nc|ENSG00000166197|Q14978-2|NOLC1;nc|ENSG00000166197|Q14978-3|NOLC1	70.39856735676683	0.27406383984062843	2				NaN	NaN	0	NaN	836	2354	3188
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3193	13.735	NaN	851.65	30	0	274.65	0.106	+			41665	SVRMNNTLR	9	31	364.1976623535156	NaN	0	364.1976623535156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVRMNNTLR_	ENSG00000005020|ENST00000345317|SKAP2;ENST00000468712.5_1_7:26766479-26894483:-|nuORF	30.317721548370564	0.32449924987115025	2				NaN	NaN	0	NaN	837	2354	3188
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3194	13.737	NaN	6226.8	30	0	818.69	0.035	+			998	AEKKSKAEL	9	64	502.29215543853525	1002.5697579438705	2	502.29217529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEKKSKAEL_	ENSG00000155827|ENST00000389120|RNF20	89.02883481214508	0.06760336634167786	2				NaN	NaN	0	NaN	838	2354	3188
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3195	13.738	NaN	4746.6	30	0	1721.7	0.144	+			45840	VAKQSTARAI	10	47	348.8765609840969	1043.6078535524907	3	348.8768005371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VAKQSTARAI_	ENSG00000170091|ENST00000303177|NSG2	25.57405402267927	0.6709832231498071	2				NaN	NaN	0	NaN	839	2354	3188
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3207	13.765	NaN	26170	30	0	12416	0.214				-1	 	0	48	412.6978897842381	823.3812266352762	2	412.6982116699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	848	2357	3206
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3208	13.769	NaN	77628	30	0	24915	0.106				-1	 	0	96	438.7605827117431	875.5066124902862	2	438.76068115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	849	2357	3206
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3209	13.771	NaN	1555.5	30	0	327.85	0.106			+	8638	EDIIRTAHK	9	40	361.5364990234375	NaN	0	361.5364990234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EDIIRTAHK_	REV__ENSG00000112208|ENST00000370693|BAG2;REV__nc|ENSG00000112208|O95816-2|BAG2	29.14955571784316	0.3303970763161698	2				NaN	NaN	0	NaN	850	2357	3206
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3210	13.772	NaN	725.78	30	0	117.41	0.106			+	30297	PTLCRVLR	8	24	479.2883605957031	NaN	0	479.2883605957031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PTLCRVLR_	REV__ENST00000569811.1_1_15:34858581-34875052:-|nuORF	12.959181472943097	1.7418937515398478	2				NaN	NaN	0	NaN	851	2357	3206
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3211	13.774	NaN	1847.6	30	0	415.69	0.106	+			19311	KAGPGVVRK	9	40	456.29248757114055	910.5704222090811	2	456.29278564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KAGPGVVRK_	ENSG00000101367|ENST00000375571|MAPRE1	49.44154591367651	0.3095138337212152	2				NaN	NaN	0	NaN	852	2357	3206
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3212	13.776	NaN	3213.2	30	0	966.97	0.106	+			34737	RWPLILYQ	8	56	544.8153852037602	1087.6162174743204	2	544.8167114257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RWPLILYQ_	WNK3|p.R872Pfs*13|1|0.07|ENSG00000196632|chrX:54250092-54250093|-/AAAG|frameshift_variant	42.396135135203025	0.6414440140393314	2				NaN	NaN	0	NaN	853	2357	3206
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3213	13.778	NaN	1616.6	30	0	147.71	0.034	+			11185	FGVSSTPLQ	9	51	468.2435624241015	934.4725719150031	2	468.2432861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FGVSSTPLQ_	ENSG00000185958|ENST00000327337|FAM186A	49.44154591367651	0.3095138337212152	2				NaN	NaN	0	NaN	854	2357	3206
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3224	13.803	NaN	50368	30	0	23419	0.214	+			3906	ATARPRPVK	9	71	498.3085243921419	994.6024958510839	2	498.30902099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATARPRPVK_	ENSG00000170892|ENST00000396388|TSEN34	70.8162118820467	0.13725933411854815	2				NaN	NaN	0	NaN	862	2360	3223
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3225	13.807	NaN	1742	30	0	426.07	0.106				-1	ATAEKCLHK	9	34	353.18670654296875	NaN	0	353.18670654296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_ATAEKC(Carbamidomethyl (C))LHK_	ENSG00000180098|ENST00000373830|TRNAU1AP;ENST00000464880.5_1_1:28879622-28887433:+|nuORF;ENST00000480930.5_1_1:28879622-28887666:+|nuORF;ENST00000484775.1_1_1:28887181-28904036:+|nuORF;ENST00000491577.5_1_1:28879622-28887259:+|nuORF;ENST00000495995.5_1_1:28880088-28887666:+|nuORF;TRNAU1AP|p.Q222Sfs*29|1|0.24|ENSG00000180098|chr1:28571305-28571305|C/-|frameshift_variant	31.529811441608018	0.3183796599642538	2				NaN	NaN	0	NaN	863	2360	3223
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3226	13.809	NaN	2531.6	30	0	1159	0.106			+	-1	MSTLLVGILI	10	38	373.22366780637435	1116.649174019323	3	373.22406005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))M(Oxidation (M))STLLVGILI_	REV__ENSG00000185862|ENST00000330927|EVI2B;REV__EVI2B|p.A205V|1|0.49|ENSG00000185862|chr17:31304996-31304996|G/A|missense_variant;REV__nc|ENSG00000185862|P34910-2|EVI2B	30.317721548370564	0.6322445173429027	2				NaN	NaN	0	NaN	864	2360	3223
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3227	13.81	NaN	792.72	30	0	83.304	0.106	+			26162	LSQTGSLVSA	10	39	481.7611083984375	NaN	0	481.7611083984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSQTGSLVSA_	ENSG00000041515|ENST00000457511|MYO16;ENST00000375857.6_1_13:109445985-109707944:+|nuORF;MYO16|p.A1585Rfs*18|2|0.37|ENSG00000041515|chr13:109141025-109141025|C/-|frameshift_variant;nc|ENSG00000041515|Q9Y6X6-2|MYO16;nc|ENSG00000041515|Q9Y6X6|MYO16	37.81151784470057	0.3760215235790741	2				NaN	NaN	0	NaN	865	2360	3223
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3228	13.812	NaN	662.4	30	0	96.708	0.106	+			16398	HEQKTSHQL	9	42	554.2815551757812	NaN	0	554.2815551757812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HEQKTSHQL_	ENSG00000164151|ENST00000296564|ICE1;ICE1|p.D1105Rfs*4|1|0.21|ENSG00000164151|chr5:5462639-5462640|-/G|frameshift_variant;ICE1|p.G1104Efs*6|1|0.34|ENSG00000164151|chr5:5462640-5462640|G/-|frameshift_variant;ICE1|p.H1965Afs*55|1|0.29|ENSG00000164151|chr5:5465219-5465220|-/A|frameshift_variant	75.04331003522576	0.0883683072398826	2				NaN	NaN	0	NaN	866	2360	3223
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3229	13.814	NaN	7242.7	30	0	2235.8	0.106				-1	 	0	51	421.7577338937766	841.5009148543533	2	421.7582092285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	867	2360	3223
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3230	13.816	NaN	1320.9	30	0	185.5	0.031			+	17237	HVRGGGAP	8	38	375.7037900637553	NaN	0	375.7040710449219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HVRGGGAP_	REV__ENSG00000198205|ENST00000358697|ZXDA;REV__ENSG00000198455|ENST00000374888|ZXDB;REV__ZXDA|p.F774Sfs*19|1|0.34|ENSG00000198205|chrX:57908100-57908100|A/-|frameshift_variant;REV__ZXDA|p.G678Wfs*16|1|0.83|ENSG00000198205|chrX:57908389-57908390|-/A|frameshift_variant	28.2542754592877	1.7418937515398478	2				NaN	NaN	0	NaN	868	2360	3223
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3242	13.841	NaN	20598	30	0	4087.8	0.214				-1	 	0	74	479.3077429989351	956.6009330646702	2	479.3078308105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	877	2363	3241
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3243	13.845	NaN	14804	30	0	3700.5	0.106				-1	TMKKKFSSYL	10	48	416.8940312468484	1247.6602643407452	3	416.8942565917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_TM(Oxidation (M))KKKFSSYL_	ENSG00000185860|ENST00000367912|CCDC190;nc|ENSG00000185860|Q86UF4-2|CCDC190;nc|ENSG00000185860|Q86UF4|CCDC190	21.68575002086885	0.7027366847906487	2				NaN	NaN	0	NaN	878	2363	3241
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3244	13.847	NaN	7650.5	30	0	1505.1	0.106	+			41646	SVQTKTIKK	9	62	344.8849197479054	1031.6329298439164	3	344.88507080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVQTKTIKK_	ENSG00000069869|ENST00000435532|NEDD4;ENST00000513957.1_1_15:56216842-56258681:-|nuORF	44.377184641726394	0.36891676396732553	2				NaN	NaN	0	NaN	879	2363	3241
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3245	13.849	NaN	3491.1	30	0	770.55	0.106	+			20598	KGAGPLRGK	9	50	442.276532247577	882.538511561954	2	442.2770690917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KGAGPLRGK_	ENSG00000067369|ENST00000382044|TP53BP1;ENST00000411772.5_2_15:43699583-43738985:-|nuORF;ENST00000572085.5_1_15:43707600-43785241:-|nuORF;nc|ENSG00000067369|Q12888-3|TP53BP1;nc|ENSG00000067369|Q12888|TP53BP1;TP53BP1|p.D1461Rfs*12|1|0.37|ENSG00000067369|chr15:43420584-43420591|GAGAGTCA/-|frameshift_variant	56.72105179125745	0.24094814563026265	2				NaN	NaN	0	NaN	880	2363	3241
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3246	13.85	NaN	2781.6	30	0	1000.9	0.106			+	-1	QVVDRCHLQ	9	41	385.5303479226684	NaN	0	385.1965637207031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_QVVDRC(Carbamidomethyl (C))HLQ_	REV__ENSG00000226174|ENST00000451127|TEX22	32.81241826257853	0.3119040447479903	2				NaN	NaN	0	NaN	881	2363	3241
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3247	13.852	NaN	686.16	30	0	118.32	0.037				-1	SAAMEIQTTQ	10	20	365.8381042480469	NaN	0	365.8381042480469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_SAAM(Oxidation (M))EIQTTQ_	ENSG00000110876|ENST00000550948|SELPLG;nc|ENSG00000110876|Q14242-2|SELPLG	28.081489160057373	0.40797012399963245	2				NaN	NaN	0	NaN	882	2363	3241
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3248	13.853	NaN	918.51	30	0	114.06	0.141			+	20060	KEKEKAERL	9	49	565.8309936523438	NaN	0	565.8309936523438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KEKEKAERL_	REV__ENSG00000197712|ENST00000358869|FAM114A1;REV__FAM114A1|p.L320Ffs*5|1|0.25|ENSG00000197712|chr4:38922778-38922779|-/T|frameshift_variant;REV__FAM114A1|p.N333Mfs*3|1|0.32|ENSG00000197712|chr4:38922817-38922817|A/-|frameshift_variant;REV__nc|ENSG00000197712|Q8IWE2-2|FAM114A1	26.063383197487333	0.34597851983111116	2				NaN	NaN	0	NaN	883	2363	3241
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3260	13.88	NaN	5258	30	0	1196.7	0.215	+			5047	ATSGSTGSVEK	11	64	512.2508556400929	1022.4871583469859	2	512.2515258789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSGSTGSVEK_	ENSG00000147548|ENST00000317025|NSD3;nc|ENSG00000147548|Q9BZ95-2|NSD3;nc|ENSG00000147548|Q9BZ95-3|NSD3;nc|ENSG00000147548|Q9BZ95-4|NSD3;nc|ENSG00000147548|Q9BZ95-5|NSD3	104.42354056486148	0.051542069836817306	2				NaN	NaN	0	NaN	892	2366	3259
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3261	13.884	NaN	1022.5	30	0	141.33	0.106	+			23630	LAQKLAEAG	9	39	450.76081839743773	NaN	0	450.7608642578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LAQKLAEAG_	CAD|p.N1541Mfs*15|1|0.33|ENSG00000084774|chr2:27237773-27237773|A/-|frameshift_variant;ENSG00000084774|ENST00000264705|CAD	51.33545320467046	0.19748963086191895	2				NaN	NaN	0	NaN	893	2366	3259
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3262	13.886	NaN	1210.2	30	0	149.45	0.106			+	32445	QVISHEKPQ	9	45	533.2881910380971	NaN	0	533.288330078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QVISHEKPQ_	REV__ENSG00000179165|ENST00000454782|PXT1	77.53327743719008	0.07983619970221587	2				NaN	NaN	0	NaN	894	2366	3259
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3263	13.887	NaN	818.26	30	0	73.722	0.106	+			28675	NLVFPGIAVSK	11	44	572.843111465	NaN	0	572.8434448242188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NLVFPGIAVSK_	ENST00000593450.1_1_19:22646763-22647404:+|nuORF	39.873155843976775	0.387718248623866	2				NaN	NaN	0	NaN	895	2366	3259
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3264	13.889	NaN	3975.4	30	0	1621.4	0.106	+			22649	KTYDTVHRR	9	41	392.54710761009505	1174.6194934304851	3	392.5473327636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KTYDTVHRR_	ENSG00000081803|ENST00000449022|CADPS2;nc|ENSG00000081803|Q86UW7-2|CADPS2;nc|ENSG00000081803|Q86UW7-3|CADPS2	42.86426827375447	0.38666266728046506	2				NaN	NaN	0	NaN	896	2366	3259
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3265	13.891	NaN	704.46	30	0	169.08	0.106	+			11399	FLPILQHI	8	36	490.7998352050781	NaN	0	490.7998352050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FLPILQHI_	ENSG00000198336|ENST00000393450|MYL4	35.200714571348534	1.7418937515398478	2				NaN	NaN	0	NaN	897	2366	3259
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3266	13.893	NaN	1252.7	30	0	217.88	0.034				-1	MPNLGAGHQ	9	50	470.7190103867472	939.4234678402944	2	470.71844482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_M(Oxidation (M))PNLGAGHQ_	ENSG00000117114|ENST00000686636|ADGRL2;nc|ENSG00000117114|O95490-2|ADGRL2;nc|ENSG00000117114|O95490-5|ADGRL2;nc|ENSG00000117114|O95490-6|ADGRL2;nc|ENSG00000117114|O95490-7|ADGRL2;nc|ENSG00000117114|O95490|ADGRL2	25.450171626174864	0.5654022654467333	2				NaN	NaN	0	NaN	898	2366	3259
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3278	13.918	NaN	3121.6	30	0	614.9	0.214			+	-1	MTQCIMNS	8	57	500.69766179659774	999.3807706599955	2	500.6982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_MTQC(Carbamidomethyl (C))IM(Oxidation (M))NS_	REV__CEP152|p.L1674Tfs*23|1|0.09|ENSG00000103995|chr15:48738362-48738363|-/T|frameshift_variant;REV__ENSG00000103995|ENST00000380950|CEP152;REV__nc|ENSG00000103995|O94986-3|CEP152	57.81127852772723	0.5234495074909924	2				NaN	NaN	0	NaN	907	2369	3277
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3279	13.922	NaN	1694.1	30	0	321.97	0.106			+	38351	SRLSSATSK	9	50	468.75860595703125	NaN	0	468.75860595703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SRLSSATSK_	REV__ARHGAP32|p.K338Sfs*13|1|0.07|ENSG00000134909|chr11:128998459-128998459|T/-|frameshift_variant	47.95952297671804	0.22075498469600283	2				NaN	NaN	0	NaN	908	2369	3277
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3280	13.924	NaN	1642.8	30	0	267.47	0.106	+			30868	QEIMIPVSKA	10	45	558.3093721120665	1114.604191290933	2	558.811279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QEIMIPVSKA_	FUBP1|p.A194V|1|0.11|ENSG00000162613|chr1:77965124-77965124|G/A|missense_variant	61.76455937419982	0.3497917639301274	2				NaN	NaN	0	NaN	909	2369	3277
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3281	13.926	NaN	4059.3	30	0	1130.7	0.106	+			5941	AVLKGVHSHKK	11	51	401.9148355167755	1202.7226771505266	3	401.91552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVLKGVHSHKK_	ENSG00000198242|ENST00000422514|RPL23A;ENST00000582736.1_1_17:27047023-27047984:+|nuORF	38.714083909724	0.5755383074156426	2				NaN	NaN	0	NaN	910	2369	3277
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3282	13.928	NaN	473.09	30	0	246.15	0.106				-1	FIAKPSTAVC	10	19	547.287353515625	NaN	0	547.287353515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_FIAKPSTAVC(Carbamidomethyl (C))_	ENSG00000164082|ENST00000395052|GRM2;ENST00000296479.9_1_3:51747995-51752125:+|nuORF	14.864876125193954	0.4201028297492154	2				NaN	NaN	0	NaN	911	2369	3277
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3283	13.929	NaN	587.97	30	0	49.789	0.036	+			11298	FKNADDTLK	9	38	526.2755126953125	NaN	0	526.2755126953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FKNADDTLK_	nc|ENSG00000185513|Q9Y468-4|L3MBTL1	35.15202426646627	0.3000918603816441	2				NaN	NaN	0	NaN	912	2369	3277
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3297	13.959	NaN	82527	30	0	10353	0.203				-1	 	0	96	493.79002688005056	985.5655008269011	2	493.7904968261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	923	2372	3296
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3298	13.963	NaN	9040.7	30	0	2125.2	0.106	+			48806	VVADKSCEK	9	68	489.74918538247283	977.4838178317457	2	489.749755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVADKSCEK_	ENSG00000205220|ENST00000358514|PSMB10;ENST00000575556.1_1_16:67970119-67970555:-|nuORF	109.47833844074708	0.029530294723441826	2				NaN	NaN	0	NaN	924	2372	3296
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3299	13.965	NaN	6066.5	30	0	1683.6	0.106	+			20163	KEKRQEQIA	9	69	565.3191533532587	1128.6237537733173	2	565.3202514648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEKRQEQIA_	ENSG00000137154|ENST00000380394|RPS6;ENST00000393214.2_1_X:73595962-73596157:-|nuORF;ENST00000498815.1_1_9:19376293-19376674:-|nuORF	80.45461616416974	0.09558281504443908	2				NaN	NaN	0	NaN	925	2372	3296
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3300	13.966	NaN	13295	30	0	2595.4	0.106			+	-1	FRPICPRLA	9	42	377.21530924490776	1128.6240983349232	3	377.2154541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_FRPIC(Carbamidomethyl (C))PRLA_	REV__ENSG00000100033|ENST00000357068|PRODH;REV__ENST00000491604.5_1_22:18909836-18923800:-|nuORF	20.94693142431847	0.6074874384046576	2				NaN	NaN	0	NaN	926	2372	3296
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3301	13.968	NaN	13872	30	0	1740.6	0.106				-1	 	0	79	452.26588350458223	902.5172140759645	2	452.2662353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	927	2372	3296
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3302	13.97	NaN	4441.6	30	0	840.28	0.106	+			22458	KTLKYREAC	9	67	556.3008449807918	1110.5871370283835	2	556.3021240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KTLKYREAC_	BRCA2|p.A1564T|1|0.1|ENSG00000139618|chr13:32339045-32339045|G/A|missense_variant;BRCA2|p.E3316Rfs*11|1|0.3|ENSG00000139618|chr13:32398452-32398453|-/A|frameshift_variant;BRCA2|p.K1691Nfs*15|1|0.11|ENSG00000139618|chr13:32339422-32339422|A/-|frameshift_variant;BRCA2|p.N1642Mfs*2|1|0.08|ENSG00000139618|chr13:32339277-32339277|A/-|frameshift_variant;BRCA2|p.N1784Tfs*7|1|0.4|ENSG00000139618|chr13:32339700-32339700|A/-|frameshift_variant;BRCA2|p.T2515Nfs*24|1|0.35|ENSG00000139618|chr13:32356530-32356531|-/A|frameshift_variant;BRCA2|p.T2685Hfs*9|1|0.05|ENSG00000139618|chr13:32363251-32363251|A/-|frameshift_variant;ENSG00000139618|ENST00000380152|BRCA2	52.936696900407355	0.27249468807391813	2				NaN	NaN	0	NaN	928	2372	3296
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3303	13.972	NaN	803.98	30	0	113.94	0.033	+			22836	KVHGSLAR	8	33	434.2614122177466	NaN	0	434.2613830566406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KVHGSLAR_	ENSG00000149806|ENST00000529639|FAU;ENST00000531357.1_1_11:64888296-64888581:-|nuORF	49.44154591367651	1.7418937515398478	2				NaN	NaN	0	NaN	929	2372	3296
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3314	13.997	NaN	17699	30	0	5903.4	0.214	+			48365	VTHEGSTVEK	10	68	543.7741920095455	1085.5338310858908	2	543.7752075195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTHEGSTVEK_	nc|ENSG00000211675|P0CG04|IGLC1;nc|ENSG00000211677|P0DOY2|IGLC2;nc|ENSG00000211679|P0DOY3|IGLC3;nc|ENSG00000211685|A0M8Q6|IGLC7;nc|ENSG00000222037|P0CF74|IGLC6;nc|ENSG00000254709|B9A064|IGLL5	128.51354385984777	0.015305610523191824	2				NaN	NaN	0	NaN	937	2375	3313
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3315	14.001	NaN	2382.5	30	0	763.15	0.106	+			46436	VERVMRQTQ	9	46	573.804894894618	NaN	0	573.804931640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VERVMRQTQ_	TTC27|p.A406V|1|0.33|ENSG00000018699|chr2:32702904-32702904|C/T|missense_variant	54.722347961057174	0.17414871455573902	2				NaN	NaN	0	NaN	938	2375	3313
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3316	14.003	NaN	1941.4	30	0	463.61	0.106	+			4065	ATDKQPYSK	9	54	519.2662785686852	1036.5180042041702	2	519.2666625976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATDKQPYSK_	ENSG00000148154|ENST00000374279|UGCG;ENST00000489355.1_1_9:114659495-114677080:+|nuORF;ENST00000490110.5_1_9:114659495-114678089:+|nuORF;ENST00000495085.1_1_9:114659495-114685228:+|nuORF;UGCG|p.L365Cfs*9|4|0.31|ENSG00000148154|chr9:111932900-111932900|T/-|frameshift_variant	112.10723106719422	0.02684780151337622	2				NaN	NaN	0	NaN	939	2375	3313
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3317	14.004	NaN	2146.2	30	0	193.42	0.106				-1	 	0	59	479.3077429989351	956.6009330646702	2	479.76947021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	940	2375	3313
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3318	14.006	NaN	4949.5	30	0	1248.5	0.106				-1	 	0	63	463.76138098317404	925.5082090331481	2	463.7613830566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	941	2375	3313
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3319	14.008	NaN	2498.8	30	0	383.65	0.106				-1	 	0	60	501.82400471734826	1001.6334565014965	2	501.8243713378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	942	2375	3313
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3320	14.01	NaN	30016	30	0	6564.3	0.035	+			34239	RTGKVTVEK	9	86	509.30609766125866	1016.5976423893173	2	509.3056335449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RTGKVTVEK_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	106.88024417677582	0.032181361622142884	2				NaN	NaN	0	NaN	943	2375	3313
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3334	14.04	NaN	3205.1	30	0	469.69	0.214	+			4263	ATGFIWSRYS	10	41	396.5315856933594	NaN	0	396.5315856933594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATGFIWSRYS_	ENSG00000143158|ENST00000271373|MPC2	28.081489160057373	0.40797012399963245	2				NaN	NaN	0	NaN	954	2378	3333
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3335	14.043	NaN	9214.5	30	0	1896.6	0.106				-1	VVMRDPQTK	9	70	545.2890016012171	1088.5634502692342	2	545.2900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_VVM(Oxidation (M))RDPQTK_	ENSG00000170144|ENST00000392524|HNRNPA3;ENST00000437410.2_1_1:54441353-54441674:-|nuORF;ENST00000472163.1_1_3:75263799-75264780:+|nuORF;HNRNPA3|p.K200Rfs*147|1|0.13|ENSG00000170144|chr2:177216544-177216544|A/-|frameshift_variant;HNRNPA3|p.Y267Lfs*2|1|0.62|ENSG00000170144|chr2:177216918-177216919|-/T|frameshift_variant;nc|ENSG00000170144|P51991-2|HNRNPA3	41.42661286455405	0.403525789677298	2				NaN	NaN	0	NaN	955	2378	3333
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3336	14.045	NaN	1878.5	30	0	299	0.106	+			19940	KEFKAKEA	8	55	475.76861572265625	NaN	0	475.76861572265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEFKAKEA_	ENSG00000136888|ENST00000374050|ATP6V1G1	49.536043120802724	1.7418937515398478	2				NaN	NaN	0	NaN	956	2378	3333
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3337	14.047	NaN	2254	30	0	443.85	0.106	+			20735	KGTKKDPNAP	10	57	528.294980006172	1054.5754070791438	2	528.2963256835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KGTKKDPNAP_	HMGB2|p.K88T|1|0.3|ENSG00000164104|chr4:173333102-173333102|T/G|missense_variant	88.17693792209575	0.14151128060301246	2				NaN	NaN	0	NaN	957	2378	3333
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3338	14.049	NaN	1274.3	30	0	298.91	0.106				-1	 	0	43	457.2763596488124	912.5381663644248	2	457.29510498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	958	2378	3333
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3339	14.051	NaN	21151	30	0	4867.1	0.037	+			18115	ILDIRKNVK	9	81	366.9045666378229	NaN	0	367.2327880859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ILDIRKNVK_	ENSG00000141404|ENST00000334049|GNAL;ENST00000590972.1_1_18:11752889-11825012:+|nuORF;GNAL|p.L333*|1|0.17|ENSG00000141404|chr18:11876683-11876683|T/-|frameshift_variant;nc|ENSG00000141404|P38405|GNAL	42.396135135203025	0.2590952873412954	2				NaN	NaN	0	NaN	959	2378	3333
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3340	14.051	NaN	1479.6	30	0	378.55	0.141			+	20224	KELNGVIAKE	10	53	550.8195837307783	NaN	0	550.3461303710938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KELNGVIAKE_	REV__ENSG00000155749|ENST00000392257|FLACC1;REV__nc|ENSG00000155749|Q96Q35|FLACC1	38.753607047826485	0.3729281687199363	2				NaN	NaN	0	NaN	960	2378	3333
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3356	14.087	NaN	10908	30	0	1788.3	0.214	+			16459	HETEQKRL	8	69	520.7772189728604	1039.5398850125207	2	520.7778930664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HETEQKRL_	ENSG00000139644|ENST00000267115|TMBIM6;ENST00000553022.1_1_12:50146843-50152319:+|nuORF;nc|ENSG00000139644|P55061-2|TMBIM6	90.36981228632155	0.27635063874291205	2				NaN	NaN	0	NaN	973	2381	3355
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3357	14.09	NaN	7137.1	30	0	1562.1	0.106	+			15023	GTNHPDVAK	9	67	469.737782640357	937.461012347514	2	469.73779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTNHPDVAK_	ENSG00000137171|ENST00000347162|KLC4;ENST00000467906.5_1_6:43030654-43039600:+|nuORF;nc|ENSG00000137171|Q9NSK0-3|KLC4;nc|ENSG00000137171|Q9NSK0-5|KLC4	78.26377905018397	0.10505600812668463	2				NaN	NaN	0	NaN	974	2381	3355
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3358	14.092	NaN	1849.8	30	0	376.62	0.106	+			34824	RYLKLKQQ	8	44	538.8325533988758	NaN	0	538.8324584960938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RYLKLKQQ_	ENSG00000131620|ENST00000355303|ANO1;nc|ENSG00000131620|Q5XXA6-2|ANO1;nc|ENSG00000131620|Q5XXA6-4|ANO1;nc|ENSG00000131620|Q5XXA6-5|ANO1	52.29916861842294	1.7418937515398478	2				NaN	NaN	0	NaN	975	2381	3355
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3359	14.094	NaN	6359.4	30	0	1240.4	0.106			+	30301	PTLKCIVLLV	10	63	366.9045666378229	NaN	0	366.9044494628906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PTLKCIVLLV_	REV__ENSG00000214711|ENST00000403897|CAPN14;REV__nc|ENSG00000214711|A8MX76-2|CAPN14	35.61828744233558	0.3832230071539346	2				NaN	NaN	0	NaN	976	2381	3355
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3360	14.096	NaN	470.08	30	0	37.934	0.106			+	24834	LIVLTLKWG	9	23	348.2254333496094	NaN	0	348.2254333496094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LIVLTLKWG_	REV__ABCB1|p.N809Tfs*6|1|0.33|ENSG00000085563|chr7:87536513-87536513|T/-|frameshift_variant;REV__ABCB1|p.P1016Lfs*2|1|0.23|ENSG00000085563|chr7:87516546-87516546|G/-|frameshift_variant;REV__ENSG00000085563|ENST00000622132|ABCB1;REV__nc|ENSG00000085563|P08183-2|ABCB1	8.822329726475273	0.4071219895973803	2				NaN	NaN	0	NaN	977	2381	3355
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3361	14.097	NaN	1150.9	30	0	310.46	0.037			+	32078	QSCTKSQIKT	10	47	562.2915089256641	1122.568464918128	2	562.2919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QSCTKSQIKT_	REV__ENST00000529924.6_2_11:117857829-117857973:+|nuORF	41.42661286455405	0.5359995577334734	2				NaN	NaN	0	NaN	978	2381	3355
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3362	14.098	NaN	1074.8	30	0	209.93	0.14			+	35466	SASSSPPPK	9	32	429.2216309186769	NaN	0	429.2216796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SASSSPPPK_	REV__ARID1A|p.A1077Gfs*28|1|0.28|ENSG00000117713|chr1:26771148-26771149|-/G|frameshift_variant;REV__ARID1A|p.F2141Sfs*59|5|0.26|ENSG00000117713|chr1:26780313-26780313|C/-|frameshift_variant;REV__ARID1A|p.K1072Nfs*21|3|0.25|ENSG00000117713|chr1:26771131-26771131|A/-|frameshift_variant;REV__ARID1A|p.K1161Sfs*19|1|0.29|ENSG00000117713|chr1:26772573-26772573|A/-|frameshift_variant;REV__ARID1A|p.M1564Hfs*8|1|0.18|ENSG00000117713|chr1:26774910-26774911|-/C|frameshift_variant;REV__ARID1A|p.N1475Tfs*6|1|0.36|ENSG00000117713|chr1:26774648-26774648|A/-|frameshift_variant;REV__ARID1A|p.P1115Qfs*46|1|0.32|ENSG00000117713|chr1:26771260-26771260|C/-|frameshift_variant;REV__ARID1A|p.P1326Rfs*155|1|0.15|ENSG00000117713|chr1:26773685-26773685|C/-|frameshift_variant;REV__ARID1A|p.P1406Rfs*37|1|0.42|ENSG00000117713|chr1:26774444-26774448|CCCCA/-|frameshift_variant;REV__ARID1A|p.P1568Lfs*44|1|0.14|ENSG00000117713|chr1:26774926-26774926|C/-|frameshift_variant;REV__ARID1A|p.P1575Hfs*37|1|0.38|ENSG00000117713|chr1:26774947-26774947|C/-|frameshift_variant;REV__ARID1A|p.P2114Rfs*21|1|0.46|ENSG00000117713|chr1:26780236-26780236|C/-|frameshift_variant;REV__ARID1A|p.Q766Pfs*51|1|0.37|ENSG00000117713|chr1:26762190-26762191|-/C|frameshift_variant;REV__ARID1A|p.V2244Gfs*34|1|0.31|ENSG00000117713|chr1:26780626-26780627|-/G|frameshift_variant;REV__ENSG00000117713|ENST00000324856|ARID1A;REV__nc|ENSG00000117713|O14497-2|ARID1A	25.57405402267927	0.3484490411150625	2				NaN	NaN	0	NaN	979	2381	3355
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3374	14.126	NaN	30834	30	0	4115.8	0.214	+			41441	SVNKASTVTK	10	90	517.7953452906897	1033.5761376481794	2	517.7960205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVNKASTVTK_	ENSG00000039523|ENST00000042381|RIPOR1;ENST00000569733.6_1_16:67575293-67580037:+|nuORF;nc|ENSG00000039523|Q6ZS17-3|RIPOR1;nc|ENSG00000039523|Q6ZS17-4|RIPOR1;nc|ENSG00000039523|Q6ZS17|RIPOR1	141.88618038797316	0.010251192423762169	2				NaN	NaN	0	NaN	988	2384	3373
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3375	14.129	NaN	11804	30	0	1987.6	0.106	+			39050	SSSPRSINK	9	77	488.26387677298436	974.5132006127687	2	488.2641906738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSSPRSINK_	ENSG00000182173|ENST00000333213|TSEN54	90.60085204095205	0.06317133949006545	2				NaN	NaN	0	NaN	989	2384	3373
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3376	14.131	NaN	13610	30	0	4413.3	0.106	+			41442	SVNKASTVTK	10	57	345.5326768027094	1033.576201008328	3	345.53289794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVNKASTVTK_	ENSG00000039523|ENST00000042381|RIPOR1;ENST00000569733.6_1_16:67575293-67580037:+|nuORF;nc|ENSG00000039523|Q6ZS17-3|RIPOR1;nc|ENSG00000039523|Q6ZS17-4|RIPOR1;nc|ENSG00000039523|Q6ZS17|RIPOR1	56.43379154798735	0.3982744522255666	2				NaN	NaN	0	NaN	990	2384	3373
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3377	14.133	NaN	3244.8	30	0	1782	0.106			+	-1	VVKMREIN	8	30	335.523502906084	NaN	0	335.5234680175781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_VVKM(Oxidation (M))REIN_	REV__ENST00000494389.5_1_2:197559796-197594150:+|nuORF;REV__nc|ENSG00000144395|Q8NCX0-2|CCDC150;REV__nc|ENSG00000144395|Q8NCX0-3|CCDC150	24.20275056022122	1.7418937515398478	2				NaN	NaN	0	NaN	991	2384	3373
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3378	14.135	NaN	4991.8	30	0	879.78	0.106	+			38241	SQMKIVHKK	9	53	366.8863701011872	1097.6372809037616	3	366.8866882324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SQMKIVHKK_	ENSG00000189266|ENST00000334351|PNRC2	45.02220120713402	0.3613509778819777	2				NaN	NaN	0	NaN	992	2384	3373
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3379	14.136	NaN	2340.9	30	0	938.93	0.106	+			4354	ATGSANMTK	9	45	440.7131068203211	879.4116607074423	2	440.7132873535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATGSANMTK_	ENSG00000147059|ENST00000374906|SPIN2A;ENSG00000186787|ENST00000434397|SPIN2B;SPIN2B|p.L82Ifs*3|1|0.16|ENSG00000186787|chrX:57120383-57120386|AAAG/-|frameshift_variant	45.02220120713402	0.3613509778819777	2				NaN	NaN	0	NaN	993	2384	3373
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3380	14.138	NaN	5611.1	30	0	1381.1	0.035	+			22357	KTGTLTENK	9	64	496.2740342334453	990.5335155336907	2	496.2740478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KTGTLTENK_	ATP10A|p.K791Rfs*28|1|0.23|ENSG00000206190|chr15:25708273-25708273|T/-|frameshift_variant;ATP10D|p.L1148*|1|0.28|ENSG00000145246|chr4:47576846-47576846|T/-|frameshift_variant;ATP10D|p.L617Cfs*41|2|0.28|ENSG00000145246|chr4:47557681-47557681|G/-|frameshift_variant;ATP10D|p.L863*|1|0.21|ENSG00000145246|chr4:47560990-47560990|T/-|frameshift_variant;ATP10D|p.L863Ffs*3|1|0.28|ENSG00000145246|chr4:47560989-47560990|-/T|frameshift_variant;ENSG00000118322|ENST00000327245|ATP10B;ENSG00000145246|ENST00000273859|ATP10D;ENSG00000206190|ENST00000555815|ATP10A;ENST00000521033.5_1_5:160061154-160212677:-|nuORF;nc|ENSG00000118322|O94823-2|ATP10B;nc|ENSG00000118322|O94823-3|ATP10B;nc|ENSG00000145246|Q9P241-2|ATP10D	93.5975768576971	0.05472259948179787	2				NaN	NaN	0	NaN	994	2384	3373
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3393	14.166	NaN	15633	30	0	2892.9	0.214				-1	 	0	73	457.2763596488124	912.5381663644248	2	457.27679443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1004	2387	3392
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3394	14.169	NaN	4264	30	0	1132.7	0.106	+			22632	KTVKDAVQK	9	56	508.8085831286821	NaN	0	508.8085632324219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTVKDAVQK_	ENSG00000103510|ENST00000219797|KAT8;ENST00000539683.2_1_16:31129164-31131922:+|nuORF;KAT8|p.Y323Tfs*48|1|0.44|ENSG00000103510|chr16:31130315-31130315|C/-|frameshift_variant;nc|ENSG00000103510|Q9H7Z6-2|KAT8	104.01359247289065	0.015103351932921906	2				NaN	NaN	0	NaN	1005	2387	3392
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3395	14.171	NaN	4746.9	30	0	973.52	0.106				-1	 	0	61	483.7714216885094	965.5282904438188	2	483.77178955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1006	2387	3392
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3396	14.173	NaN	1345	30	0	426.75	0.106				-1	 	0	40	421.7577338937766	841.5009148543533	2	421.7581481933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1007	2387	3392
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3397	14.175	NaN	1976.6	30	0	461.61	0.106	+			35049	SAEKSVAKK	9	57	474.2793364739477	946.5441200146954	2	474.2797546386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SAEKSVAKK_	ENSG00000111704|ENST00000229307|NANOG;nc|ENSG00000111704|Q9H9S0-2|NANOG	39.252832667884924	0.4290233611298554	2				NaN	NaN	0	NaN	1008	2387	3392
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3398	14.176	NaN	1453.5	30	0	170.42	0.106	+			21	AAAGPGDPK	9	40	392.20317491267525	NaN	0	392.203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AAAGPGDPK_	ENSG00000123144|ENST00000242784|TRIR	34.172542307311794	0.30503706118289736	2				NaN	NaN	0	NaN	1009	2387	3392
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3399	14.178	NaN	1058.4	30	0	251.58	0.034			+	21922	KRTVSCLE	8	47	468.2518138966592	934.4890748601184	2	468.2520751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KRTVSCLE_	REV__ENST00000462055.5_1_7:132990739-133002048:+|nuORF	37.15910966729921	0.6739408393984688	2				NaN	NaN	0	NaN	1010	2387	3392
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3412	14.206	NaN	3934	30	0	314.98	0.214	+			40165	STQRQNVVK	9	55	530.2977378987061	1058.5809228642122	2	530.299072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STQRQNVVK_	ENSG00000005175|ENST00000005386|RPAP3;nc|ENSG00000005175|Q9H6T3-3|RPAP3	42.86426827375447	0.38666266728046506	2				NaN	NaN	0	NaN	1020	2390	3411
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3413	14.209	NaN	2695	30	0	1081.4	0.106			+	12256	GATVLSKN	8	40	395.2268511325819	NaN	0	395.22674560546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GATVLSKN_	REV__ENSG00000147234|ENST00000683843|FRMPD3;REV__FRMPD3|p.S1014Afs*18|1|0.32|ENSG00000147234|chrX:107600973-107600973|C/-|frameshift_variant	23.04248740728303	1.7418937515398478	2				NaN	NaN	0	NaN	1021	2390	3411
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3414	14.211	NaN	2559	30	0	694.44	0.106			+	-1	CLIRQAFIA	9	35	364.53985595703125	NaN	0	364.53985595703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_C(Carbamidomethyl (C))LIRQAFIA_	REV__ENSG00000205922|ENST00000382349|ONECUT3	26.69291269510374	0.34280015626154364	2				NaN	NaN	0	NaN	1022	2390	3411
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3415	14.213	NaN	2157.7	30	0	229.04	0.106	+			22459	KTLLRPER	8	49	506.8162825273173	1011.6180121214346	2	506.8163757324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTLLRPER_	ENSG00000196104|ENST00000357545|SPOCK3;nc|ENSG00000196104|Q9BQ16-2|SPOCK3;nc|ENSG00000196104|Q9BQ16-4|SPOCK3;nc|ENSG00000196104|Q9BQ16-5|SPOCK3;nc|ENSG00000196104|Q9BQ16-6|SPOCK3;nc|ENSG00000196104|Q9BQ16-7|SPOCK3;nc|ENSG00000196104|Q9BQ16-9|SPOCK3;nc|ENSG00000196104|Q9BQ16|SPOCK3	21.9598887501803	0.7897753010812679	2				NaN	NaN	0	NaN	1023	2390	3411
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3416	14.215	NaN	1969.6	30	0	534.12	0.106	+			3629	ASVWPKKGT	9	31	325.18578810763125	NaN	0	325.1855773925781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASVWPKKGT_	ENSG00000122884|ENST00000394890|P4HA1;ENST00000464310.2_1_10:74769532-74774020:-|nuORF;nc|ENSG00000122884|P13674-2|P4HA1;nc|ENSG00000122884|P13674-3|P4HA1	31.529811441608018	0.3183796599642538	2				NaN	NaN	0	NaN	1024	2390	3411
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3417	14.217	NaN	2733.7	30	0	526.14	0.106	+			39067	SSSRAVVVKK	10	42	354.22017650865433	1059.638700126163	3	353.86822509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSSRAVVVKK_	CON__H-INV:HIT000292931;CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	39.873155843976775	0.5503138860789152	2				NaN	NaN	0	NaN	1025	2390	3411
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3418	14.218	NaN	354.05	30	0	79.259	0.035	+			4393	ATHPDVQQK	9	21	512.2640380859375	NaN	0	512.2640380859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATHPDVQQK_	CYP3A7|p.V331Cfs*30|1|0.13|ENSG00000160870|chr7:99710768-99710768|T/-|frameshift_variant;ENSG00000021461|ENST00000354829|CYP3A43;ENSG00000106258|ENST00000222982|CYP3A5;ENSG00000160868|ENST00000651514|CYP3A4;ENSG00000160870|ENST00000336374|CYP3A7;ENSG00000282301|ENST00000620220|CYP3A7-CYP3A51P;nc|ENSG00000021461|Q9HB55-2|CYP3A43;nc|ENSG00000021461|Q9HB55-3|CYP3A43;nc|ENSG00000021461|Q9HB55-6|CYP3A43;nc|ENSG00000160870|P24462-2|CYP3A7	14.864876125193954	0.3866709117995958	2				NaN	NaN	0	NaN	1026	2390	3411
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3429	14.244	NaN	35192	30	0	6840	0.214	+			5403	ATYGKPVHH	9	75	505.26394379677333	1008.5133346603467	2	505.2640380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATYGKPVHH_	ENSG00000174748|ENST00000307839|RPL15;ENST00000436146.1_1_3:23959450-23960989:+|nuORF;ENST00000490223.1_1_3:23959920-23960989:+|nuORF;nc|ENSG00000174748|P61313-2|RPL15	101.60071028292904	0.0375685401170269	2				NaN	NaN	0	NaN	1034	2393	3428
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3430	14.247	NaN	2841.1	30	0	328.63	0.106			+	-1	EREMLLLVG	9	55	538.2955789927835	1074.5766050523669	2	538.2964477539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_EREM(Oxidation (M))LLLVG_	REV__ENSG00000141668|ENST00000269503|CBLN2;REV__ENST00000581425.1_1_18:70205413-70206043:-|nuORF;REV__ENST00000583651.1_1_18:70205413-70210237:-|nuORF	58.78195531508484	0.22376836668196862	2				NaN	NaN	0	NaN	1035	2393	3428
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3431	14.249	NaN	1504.7	30	0	305.24	0.106	+			34199	RTDGHTLSEK	10	56	572.2890108282501	1142.5634687233	2	572.2915649414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RTDGHTLSEK_	CNOT2-GPCPD1|1|fusion;ENSG00000111596|ENST00000229195|CNOT2;ENST00000547321.5_1_12:70671967-70723393:+|nuORF;ENST00000548021.5_1_12:70671967-70729348:+|nuORF;ENST00000549443.5_1_12:70671967-70726591:+|nuORF;ENST00000551132.5_1_12:70671967-70695499:+|nuORF;ENST00000551179.1_1_12:70671967-70672093:+|nuORF;ENST00000551873.5_1_12:70671967-70723208:+|nuORF;ENST00000552422.5_1_12:70671967-70701491:+|nuORF;ENST00000552483.5_1_12:70671967-70684542:+|nuORF;nc|ENSG00000111596|Q9NZN8-4|CNOT2;nc|ENSG00000111596|Q9NZN8-5|CNOT2	72.09557110113691	0.26019946548822415	2				NaN	NaN	0	NaN	1036	2393	3428
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3432	14.251	NaN	13473	30	0	2183	0.106			+	21849	KRIWAMKK	8	60	530.8264280524651	1059.63830317173	2	530.8278198242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KRIWAMKK_	REV__ENST00000576084.5_1_17:53029422-53031174:-|nuORF	62.97842346883844	0.4722955155785405	2				NaN	NaN	0	NaN	1037	2393	3428
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3433	14.253	NaN	2197.7	30	0	139.35	0.106	+			9984	ERKEFLVR	8	47	359.54497168489536	1075.6130856548862	3	359.20001220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ERKEFLVR_	sp|F5HAY6|VICA_HCMVMViralinhibitorofcaspase-8-inducedapoptosisOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL36PE=1SV=1;sp|P16767|UL36_HCMVAUncharacterizedproteinUL36OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL36PE=3SV=1	32.81241826257853	0.7059802730411993	2				NaN	NaN	0	NaN	1038	2393	3428
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3434	14.255	NaN	4230	30	0	1564.2	0.039			+	-1	EGTHTRMHKK	10	44	414.2140847673142	NaN	0	414.2140808105469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_EGTHTRM(Oxidation (M))HKK_	REV__ENSG00000147180|ENST00000674551|ZNF711;REV__nc|ENSG00000147180|Q9Y462-2|ZNF711;REV__nc|ENSG00000147180|Q9Y462|ZNF711;REV__ZNF711|p.H694Tfs*14|3|0.25|ENSG00000147180|chrX:85271614-85271615|-/A|frameshift_variant	36.446750945000026	0.3805027428805705	2				NaN	NaN	0	NaN	1039	2393	3428
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3435	14.255	NaN	36429	30	0	3458	0.141	+			39068	SSSRAVVVKK	10	89	354.22017650865433	1059.638700126163	3	354.2204895019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSSRAVVVKK_	CON__H-INV:HIT000292931;CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	89.02883481214508	0.13663399911061233	2				NaN	NaN	0	NaN	1040	2393	3428
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3446	14.283	NaN	10496	30	0	2130.5	0.214	+			43265	TFATRQVPK	9	53	349.86940648308706	1046.5863900494612	3	349.86962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TFATRQVPK_	ENSG00000171320|ENST00000305188|ESCO2;ENST00000524293.1_1_8:27633031-27634707:+|nuORF;ESCO2|p.T371Nfs*32|2|0.26|ENSG00000171320|chr8:27787975-27787976|-/A|frameshift_variant	32.81241826257853	0.4965981579233955	2				NaN	NaN	0	NaN	1048	2396	3445
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3447	14.286	NaN	2858.5	30	0	922.29	0.106			+	37733	SLTKTGQQK	9	36	330.85760798417374	NaN	0	330.85748291015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLTKTGQQK_	REV__ENSG00000120645|ENST00000538872|IQSEC3;REV__nc|ENSG00000120645|Q9UPP2-2|IQSEC3	29.14955571784316	0.3303970763161698	2				NaN	NaN	0	NaN	1049	2396	3445
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3448	14.288	NaN	5720.6	30	0	588.37	0.106				-1	 	0	70	524.3003421875134	523.2930657209133	1	524.3012084960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1050	2396	3445
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3449	14.29	NaN	1124.5	30	0	108.54	0.106			+	8640	EDKFFIEK	8	52	528.2725830078125	NaN	0	528.2725830078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EDKFFIEK_	REV__tr|U7T220|U7T220_FUSNUDUF304domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00437PE=4SV=1	39.252832667884924	1.7418937515398478	2				NaN	NaN	0	NaN	1051	2396	3445
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3450	14.292	NaN	1789.3	30	0	862.93	0.106				-1	 	0	42	437.24241893315195	872.4702849331039	2	437.2427062988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1052	2396	3445
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3451	14.293	NaN	1646.6	30	0	378.62	0.106			+	5066	ATSKPPAQ	8	40	400.2187470757385	798.4229412182771	2	400.2190246582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATSKPPAQ_	REV__ENSG00000124731|ENST00000244709|TREM1;REV__ENST00000589695.1_1_6:41243865-41248907:-|nuORF;REV__ENST00000589882.1_1_6:41248622-41249060:-|nuORF;REV__nc|ENSG00000124731|Q9NP99-3|TREM1	60.97194046774394	0.49215940876911696	2				NaN	NaN	0	NaN	1053	2396	3445
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3452	14.295	NaN	1180.2	30	0	167.44	0.033	+			46756	VGSRPGQH	8	36	419.22115352818906	836.4277541231781	2	419.2219543457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VGSRPGQH_	nc|ENSG00000160360|Q86YR5-3|GPSM1	33.51558372728122	0.7005509609380386	2				NaN	NaN	0	NaN	1054	2396	3445
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3463	14.321	NaN	11764	30	0	1885	0.214			+	20638	KGGTERPSK	9	79	480.2665121694243	958.5184714056486	2	480.2670593261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KGGTERPSK_	REV__CON__P20930;REV__ENSG00000143631|ENST00000368799|FLG;REV__FLG|p.E160Rfs*10|1|0.4|ENSG00000143631|chr1:152314408-152314409|-/T|frameshift_variant;REV__FLG|p.E184Rfs*10|1|0.04|ENSG00000143631|chr1:152314337-152314337|T/-|frameshift_variant;REV__FLG|p.H2858Sfs*3|1|0.04|ENSG00000143631|chr1:152306315-152306316|-/C|frameshift_variant;REV__FLG|p.T2193Hfs*226|1|0.45|ENSG00000143631|chr1:152308309-152308309|T/-|frameshift_variant	90.36981228632155	0.0638227155548745	2				NaN	NaN	0	NaN	1062	2399	3462
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3464	14.324	NaN	2534.1	30	0	356.04	0.106	+			16236	HEEESGGRSV	10	67	543.7436706473407	1085.4727883614812	2	543.7446899414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HEEESGGRSV_	ENSG00000047410|ENST00000367478|TPR	75.04331003522576	0.23611669241777622	2				NaN	NaN	0	NaN	1063	2399	3462
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3465	14.326	NaN	14713	30	0	2095.4	0.106	+			35591	SAYRQPVKK	9	67	538.8135553481096	1075.6125577630191	2	538.8148803710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAYRQPVKK_	ENST00000473871.1_1_13:37583848-37586479:-|nuORF;nc|ENSG00000102710|Q8NEM7-2|SUPT20H;nc|ENSG00000102710|Q8NEM7-3|SUPT20H	65.15724298150197	0.17062369902793603	2				NaN	NaN	0	NaN	1064	2399	3462
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3466	14.328	NaN	13787	30	0	2616.3	0.106				-1	GTMLEERVQ	9	71	360.17778122045047	1077.5115142615514	3	360.17816162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_GTM(Oxidation (M))LEERVQ_	ENSG00000183798|ENST00000332312|EMILIN3;nc|ENSG00000183798|Q9NT22-2|EMILIN3	39.252832667884924	0.4290233611298554	2				NaN	NaN	0	NaN	1065	2399	3462
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3467	14.33	NaN	3705.5	30	0	1542.1	0.106	+			34405	RTSPVPRQK	9	54	534.8163871331178	1067.6182213330355	2	534.817626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RTSPVPRQK_	ENSG00000140945|ENST00000567109|CDH13;nc|ENSG00000140945|P55290-2|CDH13;nc|ENSG00000140945|P55290-3|CDH13;nc|ENSG00000140945|P55290-4|CDH13	44.377184641726394	0.36891676396732553	2				NaN	NaN	0	NaN	1066	2399	3462
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3468	14.332	NaN	2240.1	30	0	976.59	0.035	+			21633	KPSITPVPAK	10	42	519.3203466943073	NaN	0	519.3204956054688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KPSITPVPAK_	ENSG00000146221|ENST00000371505|TCTE1;TCTE1|p.P114Lfs*7|1|0.21|ENSG00000146221|chr6:44286469-44286469|G/-|frameshift_variant;TCTE1|p.S38A|1|0.21|ENSG00000146221|chr6:44287714-44287714|A/C|missense_variant	23.37791116691581	0.4201028297492154	2				NaN	NaN	0	NaN	1067	2399	3462
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3469	14.332	NaN	3010.4	30	0	422.97	0.144			+	2554	AQARLSRVAP	10	50	356.88027811490826	1067.6190049449249	3	356.8805236816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AQARLSRVAP_	REV__tr|U7SIQ6|U7SIQ6_FUSNUtRNAuridine5-carboxymethylaminomethylmodificationenzymeMnmGOS=FusobacteriumnucleatumCTI-5OX=1316586GN=mnmGPE=3SV=1	26.69291269510374	0.6618461711292317	2				NaN	NaN	0	NaN	1068	2399	3462
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3480	14.359	NaN	31303	30	0	10652	0.214	+			35206	SAKKNTSGKR	10	81	359.54497168489536	1075.6130856548862	3	359.5451354980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAKKNTSGKR_	LRGUK|p.T659Nfs*26|1|0.44|ENSG00000155530|chr7:134221903-134221904|-/A|frameshift_variant	61.691277971877994	0.35045824941635534	2				NaN	NaN	0	NaN	1076	2402	3479
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3481	14.363	NaN	19746	30	0	2921.8	0.106	+			39381	STDKQTCLK	9	81	540.7707510362669	1079.5269491393337	2	540.7720947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_STDKQTC(Carbamidomethyl (C))LK_	ENSG00000198788|ENST00000675028|MUC2;nc|ENSG00000198788|Q02817|MUC2	168.25843898104137	0.0030641937004078144	2				NaN	NaN	0	NaN	1077	2402	3479
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3482	14.365	NaN	3906.6	30	0	736.68	0.106			+	23193	KWVTEKLA	8	58	487.7876749724971	973.5607970117942	2	487.78472900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KWVTEKLA_	REV__nc|ENSG00000115419|O94925-3|GLS	82.30502934623384	0.30436709589983096	2				NaN	NaN	0	NaN	1078	2402	3479
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3483	14.367	NaN	14923	30	0	4552.4	0.106				-1	 	0	63	497.79276011392716	993.5709672946543	2	497.7931213378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1079	2402	3479
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3484	14.369	NaN	3053.6	30	0	299.13	0.106			+	26006	LSKRPPMSEL	10	37	386.5507019779312	1156.6302765339938	3	386.5509033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSKRPPMSEL_	REV__ENSG00000136014|ENST00000258499|USP44	31.634271133179894	0.6214930414500597	2				NaN	NaN	0	NaN	1080	2402	3479
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3485	14.37	NaN	15718	30	0	4908.8	0.038			+	-1	WLPRWCLGP	9	56	395.5382738089784	1183.592992027135	3	395.5386962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_WLPRWC(Carbamidomethyl (C))LGP_	REV__ENST00000395123.6_1_11:57193529-57194387:-|nuORF;REV__ENST00000395124.5_1_11:57193529-57194590:-|nuORF;REV__ENST00000526621.5_3_11:57193529-57194929:-|nuORF;REV__ENST00000529112.5_3_11:57193529-57194064:-|nuORF;REV__ENST00000532795.5_3_11:57193529-57194924:-|nuORF;REV__ENST00000533235.5_2_11:57193529-57194920:-|nuORF;REV__ENST00000533245.5_3_11:57193529-57194590:-|nuORF	26.69291269510374	0.5537881896960711	2				NaN	NaN	0	NaN	1081	2402	3479
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3486	14.371	NaN	4608.4	30	0	849.46	0.139			+	-1	TGGKMTLIGA	10	72	482.75977064703403	963.5049883608681	2	482.76019287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_TGGKM(Oxidation (M))TLIGA_	REV__ENST00000457251.1_1_22:34986144-34986663:-|nuORF	54.776311868738084	0.41334902933431344	2				NaN	NaN	0	NaN	1082	2402	3479
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3499	14.4	NaN	105410	30	0	29307	0.214	+			39735	STISSNASK	9	90	447.7294342291867	893.4443155251735	2	447.729736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STISSNASK_	ENSG00000101166|ENST00000355937|PRELID3B;nc|ENSG00000101166|Q9Y3B1-2|PRELID3B	140.11223852658463	0.010427410095706195	2				NaN	NaN	0	NaN	1092	2405	3498
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3500	14.404	NaN	4412.6	30	0	1175.1	0.106				-1	LSDCSVKSC	9	54	528.2280468381607	1054.4415407431213	2	528.2291870117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_LSDC(Carbamidomethyl (C))SVKSC(Carbamidomethyl (C))_	ENST00000514430.5_1_4:103552967-103553108:-|nuORF	35.61828744233558	0.47037581924408073	2				NaN	NaN	0	NaN	1093	2405	3498
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3501	14.406	NaN	3177.2	30	0	752.5	0.106	+			48104	VSTRINRQQ	9	48	367.8744937322068	1100.6016517968205	3	367.87432861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSTRINRQQ_	ENSG00000084676|ENST00000348332|NCOA1;nc|ENSG00000084676|Q15788-2|NCOA1;nc|ENSG00000084676|Q15788-3|NCOA1;NCOA1|p.E742Nfs*12|1|0.21|ENSG00000084676|chr2:24707688-24707688|A/-|frameshift_variant	42.86426827375447	0.38666266728046506	2				NaN	NaN	0	NaN	1094	2405	3498
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3502	14.407	NaN	1718.1	30	0	268.5	0.106			+	-1	VVKCGKLKTIQ	11	41	425.2601601282878	NaN	0	424.9260559082031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_VVKC(Carbamidomethyl (C))GKLKTIQ_	REV__ENST00000435270.2_1_1:146791151-146791412:+|nuORF	30.568863376406313	0.42918353898720446	2				NaN	NaN	0	NaN	1095	2405	3498
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3503	14.409	NaN	534.57	30	0	105.95	0.106	+			44156	TQNKPKSE	8	31	466.2455139160156	NaN	0	466.2455139160156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TQNKPKSE_	tr|U7SVT4|U7SVT4_FUSNUMolybdatetransportsystemsubstrate-bindingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01334PE=4SV=1	20.94693142431847	1.7418937515398478	2				NaN	NaN	0	NaN	1096	2405	3498
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3504	14.411	NaN	1468	30	0	324.37	0.106	+			38775	SSMAETQSK	9	50	484.7202453613281	NaN	0	484.7202453613281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSMAETQSK_	ENST00000507863.1_1_5:10378003-10378912:+|nuORF	46.45678178249821	0.2311111838007999	2				NaN	NaN	0	NaN	1097	2405	3498
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3505	14.413	NaN	3367.8	30	0	691.71	0.035	+			21970	KSDRGGGAPR	10	68	500.76887801917593	NaN	0	500.76873779296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KSDRGGGAPR_	ENSG00000145388|ENST00000388822|METTL14	89.56079334093651	0.055528282424975144	2				NaN	NaN	0	NaN	1098	2405	3498
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3516	14.438	NaN	108510	30	0	27532	0.214	+			6170	AVQKKTFTK	9	96	525.8183496600375	1049.6221463868749	2	525.8193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVQKKTFTK_	ENSG00000115306|ENST00000356805|SPTBN1;ENSG00000160460|ENST00000598249|SPTBN4;ENSG00000173898|ENST00000533211|SPTBN2;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1;nc|ENSG00000160460|Q9H254-2|SPTBN4;nc|ENSG00000160460|Q9H254-4|SPTBN4;nc|ENSG00000173898|O15020-2|SPTBN2;SPTBN1|p.K503Rfs*24|1|0.06|ENSG00000115306|chr2:54626095-54626095|G/-|frameshift_variant;SPTBN2|p.P924Qfs*35|1|0.39|ENSG00000173898|chr11:66701629-66701629|G/-|frameshift_variant	159.33581866081465	0.004693099277440949	2				NaN	NaN	0	NaN	1106	2408	3515
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3517	14.442	NaN	7374.2	30	0	1071.3	0.106	+			39077	SSSSKTFEK	9	78	500.75079790345194	999.4870428737039	2	500.7510986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSSSKTFEK_	ENSG00000112742|ENST00000369798|TTK;nc|ENSG00000112742|P33981-2|TTK;TTK|p.R854Gfs*10|1|0.26|ENSG00000112742|chr6:80042180-80042181|AA/-|frameshift_variant;TTK|p.R854Gfs*39|1|0.4|ENSG00000112742|chr6:80042180-80042180|A/-|frameshift_variant	101.45984612302182	0.0377122763612125	2				NaN	NaN	0	NaN	1107	2408	3515
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3518	14.444	NaN	2208.2	30	0	305.78	0.106			+	36531	SFGLHNAV	8	60	422.7190788995142	843.4236048658285	2	422.71923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SFGLHNAV_	REV__tr|U7SMS8|U7SMS8_FUSNUSigma-EfactornegativeregulatoryproteinRseCOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01807PE=4SV=1	20.481830146152948	0.8005983782650069	2				NaN	NaN	0	NaN	1108	2408	3515
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3519	14.446	NaN	1640.6	30	0	282.98	0.106				-1	 	0	47	407.72406533755907	813.4335777419182	2	407.72442626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1109	2408	3515
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3520	14.447	NaN	1595.4	30	0	258.44	0.106	+			44215	TRLFPDATVP	10	50	558.80570700442	1115.59686107564	2	558.80712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TRLFPDATVP_	sp|P12824|GH_HCMVAEnvelopeglycoproteinHOS=Humancytomegalovirus(strainAD169)OX=10360GN=gHPE=1SV=1;sp|Q6SW67|GH_HCMVMEnvelopeglycoproteinHOS=Humancytomegalovirus(strainMerlin)OX=295027GN=gHPE=1SV=1	54.776311868738084	0.41334902933431344	2				NaN	NaN	0	NaN	1110	2408	3515
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3521	14.449	NaN	2123.1	30	0	365.77	0.106			+	44298	TSAVEGKGQ	9	53	438.7254295493644	NaN	0	438.7247314453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TSAVEGKGQ_	REV__ENSG00000112130|ENST00000373479|RNF8;REV__ENST00000229866.10_1_6:37328318-37358531:+|nuORF;REV__ENST00000479516.1_1_6:37321940-37337593:+|nuORF;REV__nc|ENSG00000112130|O76064-3|RNF8	49.44154591367651	0.21054156626303966	2				NaN	NaN	0	NaN	1111	2408	3515
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3522	14.451	NaN	8779.4	30	0	2741.1	0.035	+			5069	ATSKPVPAEK	10	76	514.2921737928081	1026.569794652416	2	514.2926025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATSKPVPAEK_	ENSG00000182934|ENST00000332118|SRPRA;nc|ENSG00000182934|P08240-2|SRPRA	108.31271852315183	0.05301033373712667	2				NaN	NaN	0	NaN	1112	2408	3515
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3534	14.477	NaN	24484	30	0	14446	0.214				-1	 	0	76	508.3035038436687	1014.5924547541374	2	508.30389404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1121	2411	3533
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3535	14.48	NaN	6727.8	30	0	587.33	0.106	+			42748	TDLVRGTL	8	68	437.7527883284061	873.4910237236122	2	437.7530212402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TDLVRGTL_	ENSG00000100359|ENST00000248929|SGSM3;ENST00000470518.5_1_22:40803281-40805023:+|nuORF;ENST00000478085.5_1_22:40803992-40804918:+|nuORF;nc|ENSG00000100359|Q96HU1-2|SGSM3	97.47269410471826	0.25484828363392314	2				NaN	NaN	0	NaN	1122	2411	3533
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3536	14.482	NaN	5687.9	30	0	1512.9	0.106	+			21935	KSADPLKSK	9	53	487.28724397557824	NaN	0	487.28741455078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KSADPLKSK_	CAPN7|p.K253Nfs*21|1|0.35|ENSG00000131375|chr3:15227870-15227870|A/-|frameshift_variant;ENSG00000131375|ENST00000253693|CAPN7;ENST00000457023.1_1_3:15247773-15262489:+|nuORF	114.8945686534367	0.005276929498059453	2				NaN	NaN	0	NaN	1123	2411	3533
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3537	14.484	NaN	2943.8	30	0	732.03	0.106	+			20148	KEKPTGPPA	9	61	462.7603965319756	923.5062401307512	2	462.76055908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEKPTGPPA_	ENSG00000204472|ENST00000376059|AIF1;nc|ENSG00000204472|P55008-2|AIF1	85.16082228582465	0.07850854922700509	2				NaN	NaN	0	NaN	1124	2411	3533
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3538	14.486	NaN	5258.1	30	0	1698.2	0.106			+	5016	ATSAWGMLP	9	51	467.22936720623517	932.4441814792704	2	467.2293395996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATSAWGMLP_	REV__ENSG00000164258|ENST00000296684|NDUFS4;REV__ENST00000509443.1_1_5:52942143-52954486:+|nuORF	71.37791200682192	0.13483053934309522	2				NaN	NaN	0	NaN	1125	2411	3533
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3539	14.488	NaN	784.92	30	0	80.683	0.034			+	-1	KGFMETLV	8	42	470.7456970214844	NaN	0	470.7456970214844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_KGFM(Oxidation (M))ETLV_	REV__tr|U7SL68|U7SL68_FUSNUTriosephosphateisomeraseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=tpiAPE=3SV=1	23.04248740728303	1.7418937515398478	2				NaN	NaN	0	NaN	1126	2411	3533
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3540	14.488	NaN	1281.7	30	0	296.89	0.143			+	18729	ITGTTIAG	8	29	367.2086486816406	NaN	0	367.2086486816406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ITGTTIAG_	REV__KANSL3|p.S774I|1|0.06|ENSG00000114982|chr2:96602277-96602277|C/A|missense_variant	26.79610172149135	1.7418937515398478	2				NaN	NaN	0	NaN	1127	2411	3533
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3552	14.516	NaN	34409	30	0	3152.4	0.214	+			32782	RASHPIVQK	9	88	518.306174044045	1034.5977951548898	2	518.3068237304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RASHPIVQK_	ENSG00000112159|ENST00000369393|MDN1;MDN1|p.E2692*|2|0.32|ENSG00000112159|chr6:89706133-89706134|-/A|frameshift_variant;MDN1|p.F2691Lfs*7|2|0.37|ENSG00000112159|chr6:89706134-89706134|A/-|frameshift_variant;MDN1|p.K2642Nfs*17|2|0.29|ENSG00000112159|chr6:89707449-89707449|T/-|frameshift_variant;MDN1|p.L4077Cfs*15|1|0.16|ENSG00000112159|chr6:89680625-89680625|G/-|frameshift_variant;MDN1|p.L5278Ffs*6|1|0.18|ENSG00000112159|chr6:89652273-89652274|-/A|frameshift_variant	101.45984612302182	0.0377122763612125	2				NaN	NaN	0	NaN	1136	2414	3551
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3553	14.519	NaN	7526	30	0	832.01	0.106	+			32670	RACLVVSLC	9	73	482.2590032584667	962.5034535837334	2	482.2593994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RACLVVSLC_	ENSG00000168016|ENST00000645898|TRANK1;nc|ENSG00000168016|O15050|TRANK1	45.9519527083369	0.35044536499095585	2				NaN	NaN	0	NaN	1137	2414	3551
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3554	14.521	NaN	9173.5	30	0	2531.3	0.106	+			4526	ATKRLSQPAG	10	42	343.53293306449274	1027.5769697936782	3	343.5330505371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATKRLSQPAG_	ATG16L1|p.I471Cfs*34|1|0.04|ENSG00000085978|chr2:233290333-233290334|-/TGCAAAC|frameshift_variant;ENSG00000085978|ENST00000392017|ATG16L1;ENST00000479942.5_1_2:234160473-234198706:+|nuORF;nc|ENSG00000085978|Q676U5-3|ATG16L1;nc|ENSG00000085978|Q676U5-4|ATG16L1	23.04248740728303	0.69165701907106	2				NaN	NaN	0	NaN	1138	2414	3551
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3555	14.523	NaN	2030	30	0	282.05	0.106			+	38422	SSAHSAAPL	9	45	420.7137202062254	839.4128874792508	2	420.7138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSAHSAAPL_	REV__ENST00000409016.8_1_2:99206031-99206208:+|nuORF	33.51558372728122	0.4900267029546261	2				NaN	NaN	0	NaN	1139	2414	3551
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3556	14.525	NaN	1036.9	30	0	183.3	0.106				-1	MLTYLALLC	9	39	371.85964397131477	1112.5571025141444	3	371.85986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))LTYLALLC(Carbamidomethyl (C))_	ENST00000402237.1_1_6:114405343-114405799:-|nuORF	20.94693142431847	0.6074874384046576	2				NaN	NaN	0	NaN	1140	2414	3551
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3557	14.526	NaN	1257.9	30	0	252.72	0.035			+	-1	IIMAIIVAK	9	37	329.8819274902344	NaN	0	329.8819274902344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_IIM(Oxidation (M))AIIVAK_	REV__ENSG00000135926|ENST00000258412|TMBIM1	31.529811441608018	0.3183796599642538	2				NaN	NaN	0	NaN	1141	2414	3551
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3558	14.527	NaN	733.95	30	0	381.73	0.142	+			50304	WSQCLQNFL	9	19	569.7712791078559	1137.5280052825117	2	569.7722778320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_WSQCLQNFL_	ENSG00000109046|ENST00000262394|WSB1;nc|ENSG00000109046|Q9Y6I7-3|WSB1	15.641811463095205	0.6112419832031292	2				NaN	NaN	0	NaN	1142	2414	3551
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3573	14.56	NaN	35115	30	0	7657.5	0.214				-1	 	0	90	478.305508197661	954.5964634621221	2	478.3057861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1154	2417	3572
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3574	14.563	NaN	4791.8	30	0	1583.3	0.106			+	43466	TGNSTAVLTL	10	38	326.18198569955905	975.5241276988772	3	326.1822204589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TGNSTAVLTL_	REV__ENSG00000166478|ENST00000396602|ZNF143;REV__ENST00000532305.1_1_11:9546777-9549157:+|nuORF;REV__nc|ENSG00000166478|P52747-2|ZNF143;REV__nc|ENSG00000166478|P52747-3|ZNF143	34.172542307311794	0.6007644933930345	2				NaN	NaN	0	NaN	1155	2417	3572
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3575	14.565	NaN	10709	30	0	4707.7	0.106	+			14186	GSRPGRRNPE	10	53	375.86787513352385	1124.5817960007716	3	375.8681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GSRPGRRNPE_	ENST00000354230.7_1_7:99698191-99698365:-|nuORF	26.69291269510374	0.6618461711292317	2				NaN	NaN	0	NaN	1156	2417	3572
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3576	14.567	NaN	7456.3	30	0	2247.1	0.106			+	19720	KDTIRKIQ	8	67	501.30821647003626	1000.6018800068725	2	501.3083801269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KDTIRKIQ_	REV__ENSG00000092531|ENST00000249647|SNAP23;REV__nc|ENSG00000092531|O00161-2|SNAP23	113.41158876095287	0.24327961457765637	2				NaN	NaN	0	NaN	1157	2417	3572
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3577	14.569	NaN	832.91	30	0	93.936	0.106	+			17910	IGHVAHGK	8	39	409.7350769042969	NaN	0	409.7350769042969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IGHVAHGK_	EIF2S3|p.I441Nfs*4|1|0.29|ENSG00000130741|chrX:24073223-24073224|-/A|frameshift_variant;ENSG00000130741|ENST00000253039|EIF2S3;ENSG00000180574|ENST00000538173|EIF2S3B;nc|ENSG00000180574|Q2VIR3-2|EIF2S3B	26.79610172149135	1.7418937515398478	2				NaN	NaN	0	NaN	1158	2417	3572
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3578	14.571	NaN	1877	30	0	287.5	0.036			+	21024	KKKAAERKE	9	63	544.3334350585938	NaN	0	544.3334350585938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KKKAAERKE_	REV__ENSG00000130921|ENST00000253233|MTRFR	56.43379154798735	0.16452882468284893	2				NaN	NaN	0	NaN	1159	2417	3572
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3579	14.571	NaN	3834.5	30	0	516.61	0.144	+			38639	SSHVPIQKK	9	50	341.86935554052417	1022.5862372217725	3	341.86962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSHVPIQKK_	ENSG00000158290|ENST00000371322|CUL4B;nc|ENSG00000158290|Q13620|CUL4B	75.04331003522576	0.118981335847003	2				NaN	NaN	0	NaN	1160	2417	3572
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3593	14.599	NaN	25398	30	0	22976	0.214	+			32965	REDPTTRGRL	10	37	400.88579447701505	1199.6355540312452	3	400.8861999511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_REDPTTRGRL_	ENST00000412770.6_2_19:55758407-55770251:-|nuORF	20.94693142431847	0.7087701759873708	2				NaN	NaN	0	NaN	1171	2420	3592
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3594	14.602	NaN	8117.5	30	0	930.92	0.106	+			9428	EKKFDHSK	8	71	509.77066750966014	1017.5267820861203	2	509.7716064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EKKFDHSK_	BOD1L1|p.P2199Qfs*25|1|0.12|ENSG00000038219|chr4:13600304-13600304|G/-|frameshift_variant;BOD1L1|p.V570*|4|0.23|ENSG00000038219|chr4:13608565-13608565|T/-|frameshift_variant;BOD1L1|p.V667Gfs*6|1|0.06|ENSG00000038219|chr4:13604900-13604901|-/C|frameshift_variant;ENSG00000038219|ENST00000040738|BOD1L1	54.776311868738084	0.5534952410049249	2				NaN	NaN	0	NaN	1172	2420	3592
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3595	14.604	NaN	3883.6	30	0	995.87	0.106	+			16001	HAPGKGLSQS	10	67	491.25862114447693	980.5026893557539	2	491.2589416503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HAPGKGLSQS_	ENSG00000110700|ENST00000525634|RPS13;ENST00000528074.1_1_11:17098819-17099188:-|nuORF;ENST00000534329.1_1_11:17098694-17099257:-|nuORF;RPS13|p.M4I|1|0.27|ENSG00000110700|chr11:17077630-17077630|C/T|missense_variant	35.15202426646627	0.5927656479315102	2				NaN	NaN	0	NaN	1173	2420	3592
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3596	14.606	NaN	2333	30	0	582.49	0.106	+			37787	SLYKEGHSK	9	60	524.7741511768066	1047.5337494204132	2	524.7748413085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLYKEGHSK_	CHD4|p.L1404Ffs*9|1|0.42|ENSG00000111642|chr12:6582872-6582873|-/A|frameshift_variant;CHD4|p.L946Tfs*3|1|0.2|ENSG00000111642|chr12:6592505-6592506|-/T|frameshift_variant;CHD4|p.N1569Ifs*9|1|0.44|ENSG00000111642|chr12:6581364-6581364|T/-|frameshift_variant;CHD5|p.P1887Rfs*14|1|0.5|ENSG00000116254|chr1:6106698-6106698|G/-|frameshift_variant;ENSG00000111642|ENST00000544040|CHD4;ENSG00000116254|ENST00000262450|CHD5;nc|ENSG00000111642|Q14839-2|CHD4	80.45461616416974	0.09558281504443908	2				NaN	NaN	0	NaN	1174	2420	3592
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3597	14.608	NaN	2309.3	30	0	386.6	0.106			+	37393	SLGAGGDSLK	10	48	452.73982360901095	903.4650942848219	2	452.740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SLGAGGDSLK_	REV__ENSG00000165124|ENST00000374469|SVEP1;REV__ENST00000467821.1_1_9:113205816-113312285:-|nuORF;REV__nc|ENSG00000165124|Q4LDE5-4|SVEP1;REV__SVEP1|p.Y3375Mfs*48|1|0.3|ENSG00000165124|chr9:110386012-110386012|A/-|frameshift_variant	49.536043120802724	0.461275219792494	2				NaN	NaN	0	NaN	1175	2420	3592
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3598	14.61	NaN	1784.3	30	0	488.02	0.106	+			1708	AGVKVSKY	8	44	426.2526087951692	850.4906646571384	2	426.2528991699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AGVKVSKY_	ENSG00000006530|ENST00000649286|AGK	37.15910966729921	0.6739408393984688	2				NaN	NaN	0	NaN	1176	2420	3592
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3599	14.612	NaN	1728.2	30	0	244.55	0.034			+	10019	ERSLAHHT	8	52	475.7430706303195	NaN	0	475.7427673339844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ERSLAHHT_	REV__ENST00000484932.5_1_6:35248907-35254026:+|nuORF	38.80614096846853	1.7418937515398478	2				NaN	NaN	0	NaN	1177	2420	3592
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3611	14.637	NaN	44526	30	0	6762	0.214	+			20038	KEKAKETAL	9	89	509.3001606449258	1016.5857683566517	2	509.30078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEKAKETAL_	ENSG00000169230|ENST00000303204|PRELID1;ENST00000503853.1_1_5:176733373-176733568:+|nuORF;ENST00000567272.1_1_6:126965256-126965442:+|nuORF;nc|ENSG00000169230|Q9Y255-2|PRELID1	112.10723106719422	0.02684780151337622	2				NaN	NaN	0	NaN	1186	2423	3610
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3612	14.641	NaN	14432	30	0	2416.5	0.106	+			23128	KVVVSPTKK	9	66	493.32341921152687	984.6322854898538	2	493.3238525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVVVSPTKK_	ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232323706-232327997:-|nuORF	152.06079943815163	0.00638878961959199	2				NaN	NaN	0	NaN	1187	2423	3610
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3613	14.642	NaN	5758.6	30	0	1293.9	0.106	+			3710	ATAASAPAAP	10	57	414.216348450676	826.418143968152	2	414.21649169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATAASAPAAP_	ENST00000380733.8_1_9:15506621-15511001:-|nuORF;ENST00000380738.8_1_9:15506621-15510932:-|nuORF	60.97194046774394	0.3570005369683776	2				NaN	NaN	0	NaN	1188	2423	3610
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3614	14.644	NaN	6969.3	30	0	2100.8	0.106	+			49334	VVSETNDTK	9	68	496.747928531866	991.4813041305321	2	496.74871826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVSETNDTK_	ENSG00000111057|ENST00000388835|KRT18;ENST00000453838.2_1_1:182928211-182928406:-|nuORF	114.85826248499774	0.024312442104607014	2				NaN	NaN	0	NaN	1189	2423	3610
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3615	14.646	NaN	2078.5	30	0	172.92	0.106				-1	EMKQMLPK	8	64	518.763376768935	1035.51220060467	2	518.7639770507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Oxidation (M)	_EM(Oxidation (M))KQM(Oxidation (M))LPK_	ENSG00000166415|ENST00000360509|WDR72	40.77816245573522	0.6514838689002179	2				NaN	NaN	0	NaN	1190	2423	3610
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3616	14.648	NaN	3353	30	0	951.93	0.039				-1	SLWLLSCFSL	10	41	409.2138459866692	1224.6197085602075	3	409.2140808105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_SLWLLSC(Carbamidomethyl (C))FSL_	ENSG00000168925|ENST00000361017|CTRB1	36.446750945000026	0.5818864909973037	2				NaN	NaN	0	NaN	1191	2423	3610
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3617	14.649	NaN	2844.7	30	0	503.43	0.14	+			44582	TTCGSSPCR	9	52	484.69949364154616	967.3844343498923	2	484.6995544433594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_TTC(Carbamidomethyl (C))GSSPCR_	ENST00000348956.6_1_14:103986846-103986924:-|nuORF	44.377184641726394	0.36891676396732553	2				NaN	NaN	0	NaN	1192	2423	3610
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3628	14.676	NaN	12148	30	0	3863	0.214			+	-1	ATALSVGCSKM	11	49	361.8436336076396	1082.509071423119	3	361.8438720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ATALSVGCSKM(Oxidation (M))_	REV__ENSG00000147050|ENST00000611820|KDM6A;REV__KDM6A|p.N634Tfs*57|1|0.26|ENSG00000147050|chrX:45063791-45063791|A/-|frameshift_variant;REV__KDM6A|p.N906Mfs*31|1|0.53|ENSG00000147050|chrX:45076707-45076707|A/-|frameshift_variant;REV__KDM6A|p.S456Vfs*29|1|0.53|ENSG00000147050|chrX:45061358-45061359|-/G|frameshift_variant;REV__KDM6A|p.T1081Pfs*2|1|0.15|ENSG00000147050|chrX:45082743-45082743|A/-|frameshift_variant;REV__nc|ENSG00000147050|O15550|KDM6A	24.231819034082204	0.7356191775841856	2				NaN	NaN	0	NaN	1200	2426	3627
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3629	14.679	NaN	38188	30	0	16442	0.106			+	48051	VSSGQQSI	8	82	403.2057263730994	804.3968998129989	2	403.2060241699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSSGQQSI_	REV__MYO7B|p.S1033I|1|0.17|ENSG00000169994|chr2:127609922-127609922|G/T|missense_variant	122.1759843771914	0.23144439946795717	2				NaN	NaN	0	NaN	1201	2426	3627
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3630	14.681	NaN	25625	30	0	9136.6	0.106	+			23129	KVVVSPTKK	9	75	329.21808153618633	984.6324152087591	3	329.21826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KVVVSPTKK_	ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232323706-232327997:-|nuORF	107.00750918261382	0.032051501805654005	2				NaN	NaN	0	NaN	1202	2426	3627
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3631	14.683	NaN	5282	30	0	986.11	0.106	+			43711	TKPSSEKKI	9	39	339.8691536317035	1016.5856314953105	3	339.86932373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TKPSSEKKI_	ENSG00000121210|ENST00000409959|TMEM131L;nc|ENSG00000121210|A2VDJ0-2|TMEM131L;nc|ENSG00000121210|A2VDJ0-3|TMEM131L;nc|ENSG00000121210|A2VDJ0-6|TMEM131L;nc|ENSG00000121210|A2VDJ0|TMEM131L	26.69291269510374	0.5537881896960711	2				NaN	NaN	0	NaN	1203	2426	3627
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3632	14.685	NaN	10634	30	0	2065.2	0.106			+	38903	SSPPPCQLTPG	11	73	542.2614229161617	1082.5082928991233	2	542.2625122070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSPPPCQLTPG_	REV__ENSG00000125505|ENST00000245615|MBOAT7;REV__nc|ENSG00000125505|Q96N66-2|MBOAT7;REV__nc|ENSG00000125505|Q96N66-3|MBOAT7	82.7504851949679	0.12944296023181348	2				NaN	NaN	0	NaN	1204	2426	3627
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3633	14.687	NaN	49056	30	0	11633	0.035			+	-1	NKQCPGLLA	9	78	334.17934144646784	999.5161949396036	3	334.1795959472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_NKQC(Carbamidomethyl (C))PGLLA_	REV__ENSG00000180855|ENST00000301547|ZNF443;REV__ENSG00000196466|ENST00000430385|ZNF799;REV__nc|ENSG00000196466|Q96GE5-2|ZNF799;REV__ZNF443|p.W208Gfs*34|1|0.3|ENSG00000180855|chr19:12431550-12431550|A/-|frameshift_variant	47.657333605630114	0.33044192980041115	2				NaN	NaN	0	NaN	1205	2426	3627
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3634	14.687	NaN	3031.7	30	0	488.74	0.141			+	31113	QFSRIAQSK	9	70	532.795356032219	1063.576159131238	2	532.7962036132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QFSRIAQSK_	REV__ENST00000511730.2_1_5:40716249-40756023:-|nuORF	71.87747018426188	0.13267044672804276	2				NaN	NaN	0	NaN	1206	2426	3627
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3645	14.714	NaN	7154	30	0	1770.8	0.215			+	39594	STGTSGEKAK	10	68	483.2483582243583	964.4821635155166	2	483.24847412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STGTSGEKAK_	REV__ENSG00000165370|ENST00000651716|GPR101	93.1432384553994	0.11307820852620741	2				NaN	NaN	0	NaN	1214	2429	3644
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3646	14.718	NaN	10387	30	0	1768.4	0.106	+			40604	SVAHSPPEK	9	65	476.2479198227523	950.4812867123046	2	476.2484436035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVAHSPPEK_	ENSG00000167173|ENST00000394987|C15orf39;nc|nan|Q6ZRI6-2|C15orf39	167.22876102047192	0.0032399547248545047	2				NaN	NaN	0	NaN	1215	2429	3644
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3647	14.72	NaN	3009.4	30	0	742.1	0.106	+			48917	VVDNGSGMCK	10	55	513.2223662453936	1024.430179557587	2	513.223388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_VVDNGSGM(Oxidation (M))CK_	ACTBL2|p.R29Gfs*7|1|0.37|ENSG00000169067|chr5:57482623-57482623|G/-|frameshift_variant;ENSG00000075624|ENST00000646664|ACTB;ENSG00000169067|ENST00000423391|ACTBL2;ENST00000418351.1_1_15:44282253-44282364:-|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000477812.1_1_7:5569027-5569288:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF	81.52500206392136	0.18316182710238588	2				NaN	NaN	0	NaN	1216	2429	3644
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3648	14.722	NaN	8888.4	30	0	2612.2	0.106			+	22352	KTGTKNTY	8	67	456.7427510192735	911.470949105347	2	456.74298095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTGTKNTY_	REV__ENST00000517831.5_1_8:86133134-86133284:+|nuORF	93.19546047674547	0.2677966331495483	2				NaN	NaN	0	NaN	1217	2429	3644
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3649	14.723	NaN	4676.7	30	0	919.09	0.106	+			38377	SRSRLSLPP	9	41	338.2013996203288	1011.5823694611864	3	338.2015686035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SRSRLSLPP_	ARHGAP30|p.R1071G|1|0.43|ENSG00000186517|chr1:161047810-161047810|T/C|missense_variant;ENSG00000186517|ENST00000368013|ARHGAP30;nc|ENSG00000186517|Q7Z6I6-2|ARHGAP30;nc|ENSG00000186517|Q7Z6I6-3|ARHGAP30	23.04248740728303	0.5879033540491928	2				NaN	NaN	0	NaN	1218	2429	3644
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3650	14.725	NaN	3021.8	30	0	496.46	0.034	+			22184	KSSTPVPSK	9	60	465.76600824237573	929.5174635515515	2	465.76641845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KSSTPVPSK_	ECT2|p.K832Rfs*25|1|0.1|ENSG00000114346|chr3:172815693-172815693|A/-|frameshift_variant;ENSG00000114346|ENST00000392692|ECT2;nc|ENSG00000114346|Q9H8V3-2|ECT2;nc|ENSG00000114346|Q9H8V3-3|ECT2;nc|ENSG00000114346|Q9H8V3-4|ECT2	48.601550744091256	0.3193666407755445	2				NaN	NaN	0	NaN	1219	2429	3644
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3651	14.726	NaN	1309.3	30	0	285.82	0.138	+			37411	SLGGYPLAV	9	49	438.7436115974362	NaN	0	438.7434997558594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SLGGYPLAV_	ENSG00000111405|ENST00000422538|ENDOU;nc|ENSG00000111405|P21128-2|ENDOU;nc|ENSG00000111405|P21128-3|ENDOU	42.47446043378293	0.25855550551448697	2				NaN	NaN	0	NaN	1220	2429	3644
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3665	14.757	NaN	8742.6	30	0	1512.4	0.214	+			46327	VEKKKEPSV	9	73	522.3082199728642	1042.6018870125283	2	522.308837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VEKKKEPSV_	ENSG00000167674|ENST00000616600|HDGFL2;nc|ENSG00000167674|Q7Z4V5-2|HDGFL2;nc|ENSG00000167674|Q7Z4V5-3|HDGFL2;nc|ENSG00000167674|Q7Z4V5-4|HDGFL2	109.43880257439609	0.029570636687953285	2				NaN	NaN	0	NaN	1231	2432	3664
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3666	14.761	NaN	28750	30	0	10237	0.106				-1	CEAMKKLREE	10	90	437.2125329834831	1308.6157695506492	3	437.2127990722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_C(Carbamidomethyl (C))EAM(Oxidation (M))KKLREE_	ARHGEF11|p.P1384Lfs*41|1|0.34|ENSG00000132694|chr1:156937418-156937418|G/-|frameshift_variant;ENSG00000132694|ENST00000368194|ARHGEF11;ENST00000461678.1_1_1:156915777-156917159:-|nuORF;nc|ENSG00000132694|O15085|ARHGEF11	36.31764250033197	0.5830761606467809	2				NaN	NaN	0	NaN	1232	2432	3664
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3667	14.763	NaN	15984	30	0	3467.6	0.106	+			12409	GEAKPRKTL	9	70	500.3004450121916	998.5863370911832	2	500.30084228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEAKPRKTL_	ENSG00000099290|ENST00000282633|WASHC2A;ENSG00000172661|ENST00000623400|WASHC2C;nc|ENSG00000099290|Q641Q2-2|WASHC2A;nc|ENSG00000172661|Q9Y4E1-1|WASHC2C;nc|ENSG00000172661|Q9Y4E1-2|WASHC2C;nc|ENSG00000172661|Q9Y4E1-3|WASHC2C;nc|ENSG00000172661|Q9Y4E1-4|WASHC2C;nc|ENSG00000172661|Q9Y4E1-6|WASHC2C	61.691277971877994	0.19951612995419254	2				NaN	NaN	0	NaN	1233	2432	3664
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3668	14.765	NaN	5245	30	0	1287.5	0.106	+			22872	KVLDTPHHSK	10	59	387.8837342554941	1160.6293733666823	3	387.88409423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KVLDTPHHSK_	ENST00000540664.5_1_10:98714714-98714867:+|nuORF	33.03940026070387	0.6100181892187303	2				NaN	NaN	0	NaN	1234	2432	3664
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3669	14.766	NaN	2827.5	30	0	652.87	0.106	+			8331	EAKPQEAA	8	52	422.21366846226965	842.4127839913393	2	422.2138977050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EAKPQEAA_	ENSG00000277443|ENST00000612661|MARCKS	37.81151784470057	0.6698925118251505	2				NaN	NaN	0	NaN	1235	2432	3664
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3670	14.768	NaN	1432.6	30	0	149.41	0.037			+	1526	AGARGKRSRK	10	41	362.89213441831777	1085.6545738551533	3	362.8926086425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AGARGKRSRK_	REV__ENSG00000108557|ENST00000353383|RAI1;REV__nc|ENSG00000258436|Q7Z5J4-3|RAI1	36.446750945000026	0.5818864909973037	2				NaN	NaN	0	NaN	1236	2432	3664
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3671	14.769	NaN	2148.5	30	0	278.83	0.138				-1	VTCGGGVQK	9	50	453.22854182901966	904.4425307248393	2	453.22882080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_VTC(Carbamidomethyl (C))GGGVQK_	CON__Q28194;ENSG00000137801|ENST00000260356|THBS1;ENST00000497720.1_1_15:39880352-39880920:+|nuORF;nc|ENSG00000137801|P07996-2|THBS1	47.657333605630114	0.33044192980041115	2				NaN	NaN	0	NaN	1237	2432	3664
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3685	14.8	NaN	14999	30	0	2182.9	0.214	+			2821	ASAAGVQR	8	67	380.20861447421134	758.4026760152227	2	380.2089538574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASAAGVQR_	nc|ENSG00000105993|O75190-3|DNAJB6	120.62098272573253	0.23366758524054274	2				NaN	NaN	0	NaN	1248	2435	3684
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3686	14.804	NaN	9006	30	0	997.15	0.106	+			40422	STVHGGIQK	9	72	463.7553887973872	925.4962246615744	2	463.75604248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STVHGGIQK_	ENSG00000091009|ENST00000265271|RBM27;RBM27|p.K816Tfs*63|2|0.2|ENSG00000091009|chr5:146267757-146267758|AA/-|frameshift_variant	84.9155231211612	0.07920012719736333	2				NaN	NaN	0	NaN	1249	2435	3684
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3687	14.806	NaN	4337	30	0	586.02	0.106	+			9852	EPTRSAQPV	9	66	492.75849105850364	983.5024291838073	2	492.75897216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EPTRSAQPV_	ENST00000565830.5_1_16:29841852-29843003:+|nuORF	58.78195531508484	0.22376836668196862	2				NaN	NaN	0	NaN	1250	2435	3684
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3688	14.808	NaN	12298	30	0	3231.8	0.106	+			48627	VTSKGAGLSK	10	71	474.2793364739477	946.5441200146954	2	474.2793273925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTSKGAGLSK_	ENSG00000136068|ENST00000295956|FLNB;ENST00000481470.5_1_3:58155276-58156486:+|nuORF;ENST00000484981.1_1_3:58151207-58156486:+|nuORF;nc|ENSG00000136068|O75369-2|FLNB;nc|ENSG00000136068|O75369-3|FLNB;nc|ENSG00000136068|O75369-6|FLNB;nc|ENSG00000136068|O75369-7|FLNB;nc|ENSG00000136068|O75369-8|FLNB;nc|ENSG00000136068|O75369-9|FLNB	99.78786539795823	0.07832680346773438	2				NaN	NaN	0	NaN	1251	2435	3684
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3689	14.809	NaN	3062.2	30	0	1414.3	0.106			+	27783	MRRGVAVGK	9	47	495.286997529611	NaN	0	495.2870178222656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_M(Oxidation (M))RRGVAVGK_	REV__ENST00000407950.5_2_7:14942395-14942446:-|nuORF	58.78195531508484	0.1545138866451181	2				NaN	NaN	0	NaN	1252	2435	3684
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3690	14.811	NaN	6252.5	30	0	1054	0.106				-1	 	0	63	457.73190364377564	913.4492543543513	2	457.7322692871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1253	2435	3684
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3691	14.813	NaN	1324.5	30	0	168.25	0.037	+			16279	HEGKENIRAA	10	46	562.7947998046875	NaN	0	562.7947998046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HEGKENIRAA_	ENSG00000002549|ENST00000226299|LAP3;ENST00000512397.1_1_4:17579088-17584030:+|nuORF;nc|ENSG00000002549|P28838-2|LAP3	85.16082228582465	0.07406536248925066	2				NaN	NaN	0	NaN	1254	2435	3684
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3707	14.844	NaN	59768	30	0	15006	0.214				-1	 	0	75	452.77613660825585	903.5377202833117	2	452.7763977050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1267	2438	3706
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3708	14.848	NaN	16470	30	0	2613.9	0.106				-1	 	0	76	372.8956196494863	1115.665029548659	3	372.8959045410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1268	2438	3706
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3709	14.85	NaN	27695	30	0	3385.6	0.106	+			13995	GSDRDTLAK	9	76	481.74819585982397	961.481838786448	2	481.7483825683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GSDRDTLAK_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	85.86182877749512	0.07653218437724067	2				NaN	NaN	0	NaN	1269	2438	3706
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3710	14.851	NaN	9140.5	30	0	3095.4	0.106	+			22599	KTTGTMIHK	9	60	508.7807936547805	1015.547034376361	2	508.7814025878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTTGTMIHK_	ENSG00000102699|ENST00000381989|PARP4	124.08010499294276	0.018729767491916592	2				NaN	NaN	0	NaN	1270	2438	3706
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3711	14.853	NaN	5893.5	30	0	757.64	0.106	+			4119	ATEEGQPPK	9	60	478.73728166529196	955.4600103973839	2	478.7373962402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATEEGQPPK_	ENSG00000187288|ENST00000336832|CIDEC;nc|ENSG00000187288|Q96AQ7-2|CIDEC;nc|ENSG00000187288|Q96AQ7-4|CIDEC	85.16082228582465	0.07850854922700509	2				NaN	NaN	0	NaN	1271	2438	3706
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3712	14.855	NaN	1414.8	30	0	242.34	0.036			+	9302	EHVYLRQN	8	51	529.7728849643373	1057.5312169954746	2	529.7740478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EHVYLRQN_	REV__ENSG00000178209|ENST00000345136|PLEC;REV__nc|ENSG00000178209|Q15149-2|PLEC;REV__nc|ENSG00000178209|Q15149-3|PLEC;REV__nc|ENSG00000178209|Q15149-5|PLEC;REV__nc|ENSG00000178209|Q15149-6|PLEC;REV__nc|ENSG00000178209|Q15149-7|PLEC;REV__nc|ENSG00000178209|Q15149-8|PLEC;REV__nc|ENSG00000178209|Q15149-9|PLEC;REV__nc|ENSG00000178209|Q15149|PLEC	44.53106598305862	0.628196326904373	2				NaN	NaN	0	NaN	1272	2438	3706
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3713	14.856	NaN	17796	30	0	7457.7	0.145	+			49248	VVNSPHRQYK	10	68	409.8905386087016	1226.649786426305	3	409.8910217285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VVNSPHRQYK_	ENSG00000164933|ENST00000297578|SLC25A32	35.15202426646627	0.5927656479315102	2				NaN	NaN	0	NaN	1273	2438	3706
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3726	14.884	NaN	62781	30	0	16273	0.214				-1	 	0	73	401.5502208271471	1201.6288330816412	3	401.5506286621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1283	2441	3725
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3727	14.888	NaN	5437.7	30	0	472.1	0.106			+	9962	EREQQKRLE	9	55	405.8861772790595	NaN	0	405.8861389160156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EREQQKRLE_	REV__ENSG00000154310|ENST00000436636|TNIK;REV__nc|ENSG00000154310|Q9UKE5-2|TNIK;REV__nc|ENSG00000154310|Q9UKE5-3|TNIK;REV__nc|ENSG00000154310|Q9UKE5-4|TNIK;REV__nc|ENSG00000154310|Q9UKE5-5|TNIK;REV__nc|ENSG00000154310|Q9UKE5-6|TNIK;REV__nc|ENSG00000154310|Q9UKE5-7|TNIK;REV__nc|ENSG00000154310|Q9UKE5-8|TNIK;REV__TNIK|p.E1253Kfs*13|1|0.04|ENSG00000154310|chr3:171066678-171066678|C/-|frameshift_variant;REV__TNIK|p.F1336Lfs*15|1|0.15|ENSG00000154310|chr3:171063956-171063956|A/-|frameshift_variant;REV__TNIK|p.S560Ifs*2|1|0.05|ENSG00000154310|chr3:171128809-171128810|-/T|frameshift_variant;REV__TNIK|p.V1263Cfs*3|1|0.42|ENSG00000154310|chr3:171066648-171066648|C/-|frameshift_variant	63.53385203322761	0.134247007536971	2				NaN	NaN	0	NaN	1284	2441	3725
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3728	14.89	NaN	17015	30	0	1416.9	0.106	+			20917	KIVECIPN	8	76	458.2527947225225	914.491036511845	2	458.2533264160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KIVECIPN_	tr|U7SSN6|U7SSN6_FUSNUglutamateformimidoyltransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01326PE=4SV=1	76.7741389293348	0.3504530765139327	2				NaN	NaN	0	NaN	1285	2441	3725
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3729	14.892	NaN	9794	30	0	772	0.106	+			16094	HDERQDSIN	9	77	557.2489448141752	1112.4833366951502	2	557.25	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HDERQDSIN_	ENSG00000153147|ENST00000283131|SMARCA5	56.72105179125745	0.24094814563026265	2				NaN	NaN	0	NaN	1286	2441	3725
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3730	14.894	NaN	2639.5	30	0	249.41	0.106	+			95	AADEKARKL	9	59	501.29018414365197	NaN	0	501.29010009765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AADEKARKL_	ENSG00000114670|ENST00000383366|NEK11;nc|ENSG00000114670|Q8NG66-2|NEK11;nc|ENSG00000114670|Q8NG66-3|NEK11;nc|ENSG00000114670|Q8NG66-4|NEK11	51.19269402634007	0.19847346126499396	2				NaN	NaN	0	NaN	1287	2441	3725
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3731	14.895	NaN	1793	30	0	263.46	0.035			+	22142	KSQPPNQSR	9	60	521.27512141173	1040.5356898902598	2	521.2760620117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KSQPPNQSR_	REV__CELF2|p.A423Gfs*31|1|0.4|ENSG00000048740|chr10:11325842-11325843|-/G|frameshift_variant;REV__ENSG00000048740|ENST00000633077|CELF2;REV__ENSG00000149187|ENST00000687097|CELF1;REV__nc|ENSG00000048740|O95319-2|CELF2;REV__nc|ENSG00000048740|O95319-3|CELF2;REV__nc|ENSG00000048740|O95319-4|CELF2;REV__nc|ENSG00000048740|O95319-5|CELF2;REV__nc|ENSG00000048740|O95319|CELF2;REV__nc|ENSG00000149187|Q92879-2|CELF1;REV__nc|ENSG00000149187|Q92879-3|CELF1;REV__nc|ENSG00000149187|Q92879-4|CELF1;REV__nc|ENSG00000149187|Q92879-5|CELF1;REV__nc|ENSG00000149187|Q92879-6|CELF1;REV__nc|ENSG00000149187|Q92879|CELF1	52.936696900407355	0.27249468807391813	2				NaN	NaN	0	NaN	1288	2441	3725
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3732	14.896	NaN	1009.5	30	0	93.324	0.143	+			8871	EERQRQKLE	9	48	608.3255621419987	1214.6365713507973	2	608.32568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EERQRQKLE_	ENSG00000116871|ENST00000474796|MAP7D1;MAP7D1|p.A565Rfs*10|1|0.29|ENSG00000116871|chr1:36178180-36178180|C/-|frameshift_variant;MAP7D1|p.C481Afs*94|2|0.29|ENSG00000116871|chr1:36177929-36177929|C/-|frameshift_variant;MAP7D1|p.R498Efs*77|2|0.32|ENSG00000116871|chr1:36177980-36177980|C/-|frameshift_variant;nc|ENSG00000116871|Q3KQU3-2|MAP7D1;nc|ENSG00000116871|Q3KQU3-4|MAP7D1;nc|ENSG00000116871|Q3KQU3|MAP7D1	51.52775601994872	0.28504342437107444	2				NaN	NaN	0	NaN	1289	2441	3725
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3744	14.923	NaN	5623.4	30	0	509	0.214				-1	 	0	61	458.2840653022592	914.5535776713184	2	458.2844543457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1298	2444	3743
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3745	14.927	NaN	4719.3	30	0	1506	0.106	+			40022	STMTSGQAR	9	56	469.7212045432779	937.4278561533558	2	469.7212219238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STMTSGQAR_	ENSG00000106609|ENST00000341567|TMEM248;nc|ENSG00000106609|Q9NWD8-2|TMEM248	141.52041321563706	0.009766778904176347	2				NaN	NaN	0	NaN	1299	2444	3743
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3746	14.929	NaN	4369.5	30	0	598.52	0.106			+	9396	EKENQQQL	8	65	508.75338735686177	1015.4922217805236	2	508.2928161621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EKENQQQL_	REV__ENSG00000066933|ENST00000356056|MYO9A;REV__ENST00000563542.5_1_15:72185266-72338904:-|nuORF;REV__MYO9A|p.L1961*|2|0.14|ENSG00000066933|chr15:71878089-71878089|A/-|frameshift_variant;REV__nc|ENSG00000066933|B2RTY4-2|MYO9A;REV__nc|ENSG00000066933|B2RTY4-4|MYO9A;REV__nc|ENSG00000066933|B2RTY4-5|MYO9A	71.87747018426188	0.391254423828572	2				NaN	NaN	0	NaN	1300	2444	3743
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3747	14.931	NaN	301710	30	0	68679	0.106				-1	 	0	127	367.55702419750315	1099.6492431927095	3	367.5572204589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1301	2444	3743
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3748	14.933	NaN	2749.2	30	0	219.45	0.106	+			1905	AIQKGVAEK	9	61	472.281865919438	NaN	0	472.28179931640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AIQKGVAEK_	ENSG00000140575|ENST00000268182|IQGAP1;IQGAP1|p.N941Ifs*8|1|0.43|ENSG00000140575|chr15:90476693-90476693|A/-|frameshift_variant;IQGAP1|p.S1529Afs*10|1|0.15|ENSG00000140575|chr15:90492665-90492665|A/-|frameshift_variant	75.04331003522576	0.0883683072398826	2				NaN	NaN	0	NaN	1302	2444	3743
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3749	14.934	NaN	74204	30	0	9380.8	0.106				-1	 	0	86	550.8319306263382	1099.6493083194764	2	550.8327026367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1303	2444	3743
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3750	14.936	NaN	3478.2	30	0	343.88	0.033	+			965	AEKALGKAA	9	62	429.7554399918245	857.496327050449	2	429.7557067871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AEKALGKAA_	ENSG00000022277|ENST00000357348|RTF2	82.7504851949679	0.08565546331141553	2				NaN	NaN	0	NaN	1304	2444	3743
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3762	14.961	NaN	4600.5	30	0	970.39	0.214	+			48375	VTHHVSVTK	9	60	504.28485625921286	1006.5551595852257	2	504.2852478027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTHHVSVTK_	ENSG00000164828|ENST00000401592|SUN1;ENST00000413171.6_1_7:892397-912965:+|nuORF;ENST00000475971.5_1_7:893033-912965:+|nuORF;nc|ENSG00000164828|O94901-5|SUN1;nc|ENSG00000164828|O94901-6|SUN1;nc|ENSG00000164828|O94901-9|SUN1;SUN1|p.E739Gfs*27|1|0.41|ENSG00000164828|chr7:872532-872533|-/G|frameshift_variant	132.757866228626	0.013877640931359021	2				NaN	NaN	0	NaN	1313	2447	3761
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3763	14.965	NaN	3320.4	30	0	344.43	0.106	+			10088	ESKREVAL	8	54	466.26344121557395	930.5123294979479	2	466.2639465332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ESKREVAL_	ENSG00000148357|ENST00000683500|HMCN2;HMCN2|p.P4784Qfs*22|1|0.32|ENSG00000148357|chr9:130430363-130430363|C/-|frameshift_variant;nc|ENSG00000148357|Q8NDA2-1|HMCN2;nc|ENSG00000148357|Q8NDA2-4|HMCN2	79.45101966838831	0.3281480470254892	2				NaN	NaN	0	NaN	1314	2447	3761
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3764	14.967	NaN	25050	30	0	2706.4	0.106	+			21011	KKHAAEVTK	9	88	506.30043729438574	1010.5863216555715	2	506.30108642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KKHAAEVTK_	ENSG00000189325|ENST00000437635|BNIP5	106.68306549817024	0.032382560583716295	2				NaN	NaN	0	NaN	1315	2447	3761
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3765	14.969	NaN	5284.4	30	0	708.51	0.106	+			19400	KANPQVLKK	9	68	513.3270623250238	NaN	0	513.3272094726562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KANPQVLKK_	nc|ENSG00000078304|Q13362-2|PPP2R5C	124.08010499294276	0.0015010289275841425	2				NaN	NaN	0	NaN	1316	2447	3761
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3766	14.97	NaN	2673.3	30	0	893.05	0.106			+	23218	KYGKLTLKK	9	37	360.23719101280886	1077.6897436386266	3	360.2373352050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KYGKLTLKK_	REV__ENSG00000073712|ENST00000341590|FERMT2;REV__nc|ENSG00000073712|Q96AC1-2|FERMT2;REV__nc|ENSG00000073712|Q96AC1-3|FERMT2	10.865556482863946	0.6112419832031292	2				NaN	NaN	0	NaN	1317	2447	3761
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3767	14.972	NaN	1119.6	30	0	180.44	0.106	+			19534	KAYKTVIKK	9	46	539.8528680581012	NaN	0	539.8529663085938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KAYKTVIKK_	ENSG00000013275|ENST00000157812|PSMC4;ENST00000593455.5_1_19:40486165-40487209:+|nuORF;nc|ENSG00000013275|P43686-2|PSMC4	52.936696900407355	0.1864545979552969	2				NaN	NaN	0	NaN	1318	2447	3761
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3768	14.974	NaN	3425.6	30	0	771.43	0.035			+	8438	EARIESQPS	9	63	508.75338735686177	1015.4922217805236	2	508.75384521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EARIESQPS_	REV__ENSG00000143341|ENST00000271588|HMCN1;REV__HMCN1|p.E34D|1|0.2|ENSG00000143341|chr1:185734881-185734881|A/C|missense_variant;REV__HMCN1|p.G3718Afs*6|1|0.04|ENSG00000143341|chr1:186113995-186113995|G/-|frameshift_variant;REV__HMCN1|p.L3491Hfs*10|1|0.12|ENSG00000143341|chr1:186095419-186095420|-/ATAT|frameshift_variant;REV__HMCN1|p.S4801Rfs*11|1|0.07|ENSG00000143341|chr1:186145536-186145537|-/AGAATAA|frameshift_variant;REV__HMCN1|p.T334Qfs*26|1|0.22|ENSG00000143341|chr1:185922472-185922472|A/-|frameshift_variant;REV__HMCN1|p.V1339Gfs*22|1|0.42|ENSG00000143341|chr1:186000186-186000186|T/-|frameshift_variant;REV__HMCN1|p.Y2955Ifs*3|1|0.29|ENSG00000143341|chr1:186082933-186082934|-/A|frameshift_variant;REV__nc|ENSG00000143341|Q96RW7-2|HMCN1	49.44154591367651	0.3095138337212152	2				NaN	NaN	0	NaN	1319	2447	3761
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3782	15.004	NaN	19426	30	0	4228.3	0.214				-1	 	0	78	438.5933239460847	2625.5162848769082	6	438.7608337402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1330	2450	3781
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3783	15.008	NaN	14115	30	0	2975.9	0.106	+			5092	ATSNVHMVKK	10	72	372.20576886354235	1113.595477190827	3	372.2060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATSNVHMVKK_	ENSG00000197256|ENST00000586659|KANK2;ENST00000590400.1_1_19:11303345-11305238:-|nuORF;KANK2|p.P430Rfs*5|1|0.23|ENSG00000197256|chr19:11178681-11178681|G/-|frameshift_variant;nc|ENSG00000197256|Q63ZY3-2|KANK2;nc|ENSG00000197256|Q63ZY3-3|KANK2	28.5767321226876	0.6464621404813697	2				NaN	NaN	0	NaN	1331	2450	3781
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3784	15.009	NaN	8466.7	30	0	1619.9	0.106	+			5612	AVCKAGAVEK	10	72	516.7781632620437	1031.5417735908873	2	516.779052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_AVC(Carbamidomethyl (C))KAGAVEK_	ENO1|p.D318Mfs*5|1|0.43|ENSG00000074800|chr1:8864006-8864006|C/-|frameshift_variant;ENSG00000074800|ENST00000234590|ENO1;ENST00000464920.1_1_1:8921421-8930582:-|nuORF;nc|ENSG00000074800|P06733-2|ENO1	80.45461616416974	0.1919067876629769	2				NaN	NaN	0	NaN	1332	2450	3781
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3785	15.011	NaN	4153.4	30	0	628.29	0.106			+	46773	VGVICPIIFV	10	63	530.3162756291547	1058.6179983251093	2	530.3173217773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VGVICPIIFV_	REV__ENST00000254322.2_1_19:14625750-14625894:-|nuORF	26.79610172149135	0.6610034878437611	2				NaN	NaN	0	NaN	1333	2450	3781
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3786	15.013	NaN	8460.9	30	0	2687	0.106				-1	 	0	68	429.7188921579467	857.4232313826934	2	429.71923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1334	2450	3781
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3787	15.015	NaN	3167.9	30	0	562.09	0.036	+			25779	LSALSRSVRA	10	41	353.8802094261605	1058.6187988786814	3	353.88043212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSALSRSVRA_	ENSG00000105808|ENST00000262940|RASA4;ENSG00000170667|ENST00000465829|RASA4B;ENST00000523568.1_7:102228019-102246337:-|nuORF;nc|ENSG00000105808|O43374-2|RASA4	39.252832667884924	0.5560298534376815	2				NaN	NaN	0	NaN	1335	2450	3781
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3788	15.015	NaN	11954	30	0	1101.4	0.137				-1	 	0	72	401.2445950579445	800.474637182689	2	401.2450256347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1336	2450	3781
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3802	15.047	NaN	95289	30	0	8392.1	0.189				-1	MEDKRSLSM	9	94	585.7596043188919	1169.5046557045837	2	585.7601928710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term),2 Oxidation (M)	_(Acetyl (Protein N-term))M(Oxidation (M))EDKRSLSM(Oxidation (M))_	ENSG00000171116|ENST00000370416|HSFX1;ENSG00000268738|ENST00000598963|HSFX2;HSFX2|p.Q20Tfs*39|1|0.2|ENSG00000268738|chrX:149594644-149594645|-/C|frameshift_variant	56.72105179125745	0.24094814563026265	2				NaN	NaN	0	NaN	1347	2453	3801
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3803	15.05	NaN	46832	30	0	7156.5	0.106	+			39376	STDKQTCLK	9	86	512.2599789879108	1022.5054050426216	2	512.2606201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STDKQTCLK_	ENSG00000198788|ENST00000675028|MUC2;nc|ENSG00000198788|Q02817|MUC2	157.3448221729694	0.005157168637584854	2				NaN	NaN	0	NaN	1348	2453	3801
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3804	15.052	NaN	6380.3	30	0	1123	0.106	+			18778	ITQGKDAAVSK	11	70	559.3135000611884	1116.6124471891767	2	559.3145141601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ITQGKDAAVSK_	ENSG00000140464|ENST00000268058|PML;ENST00000564725.1_1_15:74290377-74317280:+|nuORF;nc|ENSG00000140464|P29590-10|PML;nc|ENSG00000140464|P29590-11|PML;nc|ENSG00000140464|P29590-12|PML;nc|ENSG00000140464|P29590-13|PML;nc|ENSG00000140464|P29590-14|PML;nc|ENSG00000140464|P29590-2|PML;nc|ENSG00000140464|P29590-3|PML;nc|ENSG00000140464|P29590-4|PML;nc|ENSG00000140464|P29590-5|PML;nc|ENSG00000140464|P29590-8|PML;nc|ENSG00000140464|P29590-9|PML	160.9127304478731	5.2340329482572136E-05	2				NaN	NaN	0	NaN	1349	2453	3801
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3805	15.054	NaN	16607	30	0	4227.3	0.106			+	7965	DSSLNLIQ	8	72	445.2352078229414	888.4558627126828	2	445.2349853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DSSLNLIQ_	REV__ENSG00000169340|ENST00000302451|PDILT;REV__PDILT|p.A345T|1|0.38|ENSG00000169340|chr16:20369575-20369575|C/T|missense_variant	51.33545320467046	0.5859736979383976	2				NaN	NaN	0	NaN	1350	2453	3801
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3806	15.056	NaN	752.95	30	0	69.961	0.106			+	47503	VQKKGTPVQ	9	45	492.7953186035156	NaN	0	492.7953186035156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VQKKGTPVQ_	REV__ENSG00000178691|ENST00000322652|SUZ12;REV__ENST00000578195.6_1_17:29093564-29096961:+|nuORF	34.172542307311794	0.30503706118289736	2				NaN	NaN	0	NaN	1351	2453	3801
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3807	15.058	NaN	8304	30	0	3012.3	0.106				-1	 	0	62	429.7370989877963	857.4596450423926	2	429.73724365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1352	2453	3801
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3808	15.059	NaN	5922.7	30	0	861.43	0.035	+			22726	KVAVATPAKK	10	69	506.8287682082337	1011.6429834832675	2	506.8288879394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KVAVATPAKK_	ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232323706-232327997:-|nuORF	136.48854661914896	0.011690315628778602	2				NaN	NaN	0	NaN	1353	2453	3801
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3825	15.095	NaN	10807	30	0	3931.3	0.214	+			22371	KTIDASVSKK	10	66	359.5482274583653	1075.622852975296	3	359.5484313964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTIDASVSKK_	ENSG00000171681|ENST00000261168|ATF7IP;ENST00000535179.1_1_12:14619386-14628955:+|nuORF;ENST00000537653.5_1_12:14576849-14628955:+|nuORF;nc|ENSG00000171681|Q6VMQ6-2|ATF7IP;nc|ENSG00000171681|Q6VMQ6-4|ATF7IP;nc|ENSG00000171681|Q6VMQ6-5|ATF7IP	115.91470973250675	0.03309960411491346	2				NaN	NaN	0	NaN	1367	2456	3824
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3826	15.098	NaN	7525.4	30	0	1190.9	0.106	+			20723	KGSSNSYAIKK	11	78	591.8272497958285	1181.639946658457	2	591.827880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KGSSNSYAIKK_	ENSG00000083845|ENST00000196551|RPS5	142.76334254051145	0.00028926960707674297	2				NaN	NaN	0	NaN	1368	2456	3824
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3827	15.1	NaN	15520	30	0	4612.2	0.106	+			20724	KGSSNSYAIKK	11	87	394.8870350709986	1181.6392758131958	3	394.88739013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KGSSNSYAIKK_	ENSG00000083845|ENST00000196551|RPS5	136.80661076175005	0.0007621683046424921	2				NaN	NaN	0	NaN	1369	2456	3824
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3828	15.102	NaN	3702.8	30	0	826.24	0.106	+			7758	DNSEEEERV	9	61	553.7334362789161	1105.452319624632	2	553.7344360351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DNSEEEERV_	ADGRL4|p.M380Rfs*18|1|0.04|ENSG00000162618|chr1:78921731-78921732|-/TATTTATAAATGTTGCTTTTTC|frameshift_variant;ENSG00000162618|ENST00000370742|ADGRL4	35.15202426646627	0.4747332964206883	2				NaN	NaN	0	NaN	1370	2456	3824
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3829	15.104	NaN	5168.3	30	0	1351.4	0.106	+			27857	MTGSSAPCK	9	53	469.7064877234398	937.3984225136796	2	469.7068786621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_MTGSSAPC(Carbamidomethyl (C))K_	ENST00000392001.6_1_2:238499129-238499162:-|nuORF	104.0567914643314	0.03506238181059741	2				NaN	NaN	0	NaN	1371	2456	3824
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3830	15.106	NaN	8967.5	30	0	1807.4	0.035	+			48509	VTNDKLTSK	9	74	503.2819279021892	1004.5493028711784	2	503.28228759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTNDKLTSK_	ENSG00000135899|ENST00000258381|SP110;ENST00000486146.2_1_2:231068050-231077551:-|nuORF;nc|ENSG00000135899|Q9HB58-3|SP110;nc|ENSG00000135899|Q9HB58-5|SP110;nc|ENSG00000135899|Q9HB58-7|SP110;nc|ENSG00000135899|Q9HB58|SP110	117.7056744995986	0.022588689529990102	2				NaN	NaN	0	NaN	1372	2456	3824
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3831	15.106	NaN	6652.6	30	0	1911.4	0.143	+			21478	KNILVIGAGK	10	45	338.22177119231736	1011.6434841771521	3	338.2220458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KNILVIGAGK_	tr|U7SH88|U7SH88_FUSNUprecorrin-2dehydrogenaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02366PE=4SV=1	47.95952297671804	0.47580206326914537	2				NaN	NaN	0	NaN	1373	2456	3824
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3848	15.143	NaN	23306	30	0	4984.2	0.214			+	24728	LHPQPMPSAGL	11	87	574.3005176110179	1146.5864822888357	2	574.3014526367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LHPQPMPSAGL_	REV__LPCAT4|p.H491Tfs*75|1|0.14|ENSG00000176454|chr15:34359232-34359233|-/G|frameshift_variant	75.04331003522576	0.19369523587789836	2				NaN	NaN	0	NaN	1387	2459	3847
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3849	15.147	NaN	15121	30	0	6117.9	0.106				-1	 	0	59	383.2028310497101	1146.5866637493302	3	383.2032165527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1388	2459	3847
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3850	15.149	NaN	47364	30	0	11482	0.106				-1	 	0	88	439.23442514005586	876.4542973469117	2	439.234619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1389	2459	3847
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3851	15.151	NaN	5015.1	30	0	1402.4	0.106	+			45302	TVSATSPNK	9	54	452.7397788920313	903.4650048508627	2	452.73992919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TVSATSPNK_	ENSG00000105856|ENST00000222574|HBP1;nc|ENSG00000105856|O60381-2|HBP1;nc|ENSG00000105856|O60381-3|HBP1	101.25262130126117	0.03792372629710479	2				NaN	NaN	0	NaN	1390	2459	3847
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3852	15.152	NaN	1082.7	30	0	153.34	0.106			+	3742	ATADAKTKL	9	59	459.7659912109375	NaN	0	459.7659912109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATADAKTKL_	REV__nc|ENSG00000198963|Q92753|RORB	31.529811441608018	0.3183796599642538	2				NaN	NaN	0	NaN	1391	2459	3847
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3853	15.154	NaN	3662.3	30	0	1189.5	0.038				-1	 	0	44	390.5262801067994	1168.5570109205983	3	390.526611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1392	2459	3847
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3854	15.155	NaN	1538	30	0	299.77	0.139	+			32113	QSITKDKK	8	55	474.27891230773815	946.5432716822763	2	474.2709045410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QSITKDKK_	ENSG00000188738|ENST00000424728|FSIP2;FSIP2|p.D5579Mfs*10|1|0.09|ENSG00000188738|chr2:185806029-185806029|A/-|frameshift_variant;FSIP2|p.K6152Rfs*27|1|0.43|ENSG00000188738|chr2:185807758-185807758|A/-|frameshift_variant;FSIP2|p.K6528Nfs*5|1|0.33|ENSG00000188738|chr2:185808884-185808884|A/-|frameshift_variant;FSIP2|p.V5734Yfs*24|2|0.23|ENSG00000188738|chr2:185806499-185806499|A/-|frameshift_variant;FSIP2|p.V6322*|1|0.42|ENSG00000188738|chr2:185808265-185808265|A/-|frameshift_variant	32.81241826257853	0.7059802730411993	2				NaN	NaN	0	NaN	1393	2459	3847
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3867	15.184	NaN	331650	30	0	56762	0.176	+			6338	AVTKYTSSK	9	126	492.77142325488774	983.5282935765755	2	492.7713928222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVTKYTSSK_	ENSG00000146047|ENST00000274764|H2BC1;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000196890|ENST00000693095|H2BC26;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000436555.1_1_1:228651916-228652012:-|nuORF;nc|ENSG00000203814|Q5QNW6-2|H2BC18;nc|ENSG00000285480|A0A2R8Y619|H2BK1	191.44940797552337	0.00014666235100428603	2				NaN	NaN	0	NaN	1403	2462	3866
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3868	15.187	NaN	14354	30	0	1761.8	0.106	+			43117	TEREQKNSL	9	73	552.7853373779628	1103.5561218227256	2	552.7859497070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEREQKNSL_	BICD2|p.R258C|1|0.42|ENSG00000185963|chr9:92720590-92720590|G/A|missense_variant;ENSG00000185963|ENST00000356884|BICD2;nc|ENSG00000185963|Q8TD16|BICD2	115.23196543181992	0.024086211614104236	2				NaN	NaN	0	NaN	1404	2462	3866
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3869	15.189	NaN	3747	30	0	1395.6	0.106	+			33301	RGQVPPSRL	9	58	505.2980528908087	1008.5815528484175	2	505.29876708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RGQVPPSRL_	ENST00000300737.8_1_11:3876932-3877493:+|nuORF	40.77816245573522	0.41113185337114944	2				NaN	NaN	0	NaN	1405	2462	3866
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3870	15.191	NaN	1819.6	30	0	279.99	0.106			+	-1	NGLLGFCLF	9	40	520.765380859375	NaN	0	520.765380859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_NGLLGFC(Carbamidomethyl (C))LF_	REV__ENST00000435881.6_1_17:40723892-40724087:+|nuORF	35.200714571348534	0.2998460331538257	2				NaN	NaN	0	NaN	1406	2462	3866
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3871	15.193	NaN	1451.4	30	0	226.2	0.106			+	12988	GETWHAARL	9	30	347.5126586625928	NaN	0	347.5126647949219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GETWHAARL_	REV__ENSG00000179431|ENST00000317811|FJX1;REV__FJX1|p.H423Afs*6|1|0.56|ENSG00000179431|chr11:35619899-35619900|-/A|frameshift_variant	40.77816245573522	0.2702456086868081	2				NaN	NaN	0	NaN	1407	2462	3866
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3872	15.194	NaN	1999.1	30	0	181.09	0.106	+			32955	REDGRGVCV	9	57	524.253653064638	1046.492753196076	2	524.2538452148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_REDGRGVC(Carbamidomethyl (C))V_	ENST00000300134.7_1_12:57504946-57505147:-|nuORF	58.78195531508484	0.22376836668196862	2				NaN	NaN	0	NaN	1408	2462	3866
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3873	15.196	NaN	891.28	30	0	63.578	0.034	+			36911	SIIGHPRH	8	44	458.75860595703125	NaN	0	458.75860595703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SIIGHPRH_	ENST00000457622.1_1_6:46172676-46173294:+|nuORF	26.79610172149135	1.7418937515398478	2				NaN	NaN	0	NaN	1409	2462	3866
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3886	15.223	NaN	7830	30	0	1555.4	0.214	+			12413	GEAKVKKQL	9	65	500.8108157926782	999.6070786521565	2	500.8111572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEAKVKKQL_	ENSG00000125844|ENST00000377813|RRBP1;nc|ENSG00000125844|Q9P2E9-3|RRBP1;RRBP1|p.A628Gfs*69|1|0.35|ENSG00000125844|chr20:17621915-17621916|-/T|frameshift_variant	136.26810882979174	0.012230845423532208	2				NaN	NaN	0	NaN	1419	2465	3885
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3887	15.227	NaN	2511.9	30	0	554.42	0.106			+	522	ACSFKAIAG	9	53	434.22382519644054	NaN	0	434.22479248046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ACSFKAIAG_	REV__ENST00000484847.5_1_7:50343744-50343816:+|nuORF	55.50420428727701	0.16876052142120426	2				NaN	NaN	0	NaN	1420	2465	3885
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3888	15.229	NaN	3879	30	0	793.55	0.106	+			34492	RVFKEENQK	9	70	589.3198626367399	1176.6251723402797	2	589.3204956054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RVFKEENQK_	ENSG00000029363|ENST00000531224|BCLAF1;ENST00000476194.1_1_6:136593123-136594302:-|nuORF;ENST00000505813.1_1_5:110284092-110284650:-|nuORF;ENST00000534269.5_1_6:136590404-136595119:-|nuORF;ENST00000534792.5_1_6:136590573-136594302:-|nuORF;nc|ENSG00000029363|Q9NYF8-2|BCLAF1;nc|ENSG00000029363|Q9NYF8-3|BCLAF1;nc|ENSG00000029363|Q9NYF8-4|BCLAF1	84.81729255234993	0.07947707105691067	2				NaN	NaN	0	NaN	1421	2465	3885
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3889	15.23	NaN	1458.2	30	0	187.79	0.106	+			7509	DGLQLTPA	8	44	407.7190373952532	NaN	0	407.7190246582031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DGLQLTPA_	ENSG00000051341|ENST00000264233|POLQ;nc|ENSG00000051341|O75417-2|POLQ;POLQ|p.H2496Tfs*59|1|0.11|ENSG00000051341|chr3:121436179-121436179|G/-|frameshift_variant;POLQ|p.Y2285Ifs*7|1|0.44|ENSG00000051341|chr3:121467633-121467633|A/-|frameshift_variant	19.359975847455235	1.7418937515398478	2				NaN	NaN	0	NaN	1422	2465	3885
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3890	15.232	NaN	5737.8	30	0	1740.9	0.106			+	17506	IDGRVKHK	8	63	476.78920282704075	NaN	0	476.7872314453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IDGRVKHK_	REV__ENSG00000073111|ENST00000265056|MCM2;REV__ENST00000474964.5_1_3:127323572-127340613:+|nuORF;REV__ENST00000477668.5_1_3:127323572-127337961:+|nuORF	51.33545320467046	1.7418937515398478	2				NaN	NaN	0	NaN	1423	2465	3885
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3891	15.234	NaN	1515.6	30	0	169.46	0.042			+	27500	MMLRHNRNHDM	11	58	485.5578918457031	NaN	0	485.5578918457031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MMLRHNRNHDM_	REV__AKAP8L|p.R511H|1|0.26|ENSG00000011243|chr19:15397154-15397154|C/T|missense_variant	20.030474535948922	0.456735970842152	2				NaN	NaN	0	NaN	1424	2465	3885
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3892	15.235	NaN	4146	30	0	648.36	0.14	+			39212	STAEESSPPK	10	68	516.7452789153419	1031.4760048974838	2	516.7465209960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STAEESSPPK_	ENSG00000181555|ENST00000409792|SETD2;nc|ENSG00000181555|Q9BYW2-2|SETD2;nc|ENSG00000181555|Q9BYW2-3|SETD2;SETD2|p.N1396Mfs*16|1|0.42|ENSG00000181555|chr3:47120449-47120449|T/-|frameshift_variant;SETD2|p.R1407Gfs*5|1|0.18|ENSG00000181555|chr3:47120417-47120417|T/-|frameshift_variant;SETD2|p.T1652Yfs*14|1|0.26|ENSG00000181555|chr3:47101519-47101520|-/A|frameshift_variant;SETD2|p.T305Qfs*35|2|0.24|ENSG00000181555|chr3:47123723-47123723|T/-|frameshift_variant	104.01359247289065	0.06577755598965461	2				NaN	NaN	0	NaN	1425	2465	3885
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3904	15.262	NaN	47545	30	0	10819	0.214	+			35683	SDIAQNQE	8	86	452.7034680031644	903.3923830731288	2	452.70416259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SDIAQNQE_	nc|ENSG00000285708|Q9H334-7|FOXP1	58.78195531508484	0.5138399468736706	2				NaN	NaN	0	NaN	1434	2468	3903
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3905	15.266	NaN	47374	30	0	26311	0.106	+			43617	TINGHNAEVRK	11	72	413.557730051044	1237.651360753332	3	413.55816650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TINGHNAEVRK_	ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;ENST00000495810.1_1_7:26235422-26236427:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1	46.95498715874613	0.46277758983638906	2				NaN	NaN	0	NaN	1435	2468	3903
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3906	15.268	NaN	6650.8	30	0	697.31	0.106	+			35988	SEHPSTSKM	9	63	502.22879218399186	1002.4430314347837	2	502.2292785644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEHPSTSKM_	ENSG00000102241|ENST00000218364|HTATSF1;HTATSF1|p.K555Nfs*38|1|0.74|ENSG00000102241|chrX:136511406-136511406|A/-|frameshift_variant;HTATSF1|p.V610Cfs*2|1|0.32|ENSG00000102241|chrX:136511568-136511568|A/-|frameshift_variant	98.62937762414208	0.04060045538121712	2				NaN	NaN	0	NaN	1436	2468	3903
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3907	15.269	NaN	2428.3	30	0	363.04	0.106			+	-1	PRQASMTMGPH	11	61	622.7792533601332	1243.5439537870664	2	622.7789306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Oxidation (M)	_PRQASM(Oxidation (M))TM(Oxidation (M))GPH_	REV__MEIS2|p.S456R|1|0.26|ENSG00000134138|chr15:36892241-36892241|T/G|missense_variant	51.19269402634007	0.4047928213175833	2				NaN	NaN	0	NaN	1437	2468	3903
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3908	15.271	NaN	12845	30	0	2164.7	0.106				-1	 	0	75	517.310814026783	1032.6070751203658	2	517.3115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1438	2468	3903
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3909	15.273	NaN	1776.7	30	0	154.62	0.036	+			34404	RTSNERPGSG	10	61	530.7633549291758	NaN	0	530.7626342773438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RTSNERPGSG_	ENSG00000163877|ENST00000296215|SNIP1	49.536043120802724	0.30853568297719935	2				NaN	NaN	0	NaN	1439	2468	3903
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3910	15.274	NaN	2181.1	30	0	158.83	0.146			+	50309	WSTHLDRRPQ	10	50	432.5578467668657	1294.651710900797	3	432.5580749511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_WSTHLDRRPQ_	REV__CUX2|p.A1430Cfs*11|1|0.26|ENSG00000111249|chr12:111348143-111348144|-/C|frameshift_variant;REV__CUX2|p.I207Nfs*32|1|0.38|ENSG00000111249|chr12:111295387-111295388|-/A|frameshift_variant;REV__CUX2|p.L655Sfs*49|1|0.38|ENSG00000111249|chr12:111312159-111312160|-/T|frameshift_variant;REV__CUX2|p.P1429Lfs*23|1|0.33|ENSG00000111249|chr12:111348144-111348144|C/-|frameshift_variant;REV__ENSG00000111249|ENST00000261726|CUX2	20.83715455343099	0.7096666582730032	2				NaN	NaN	0	NaN	1440	2468	3903
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3925	15.307	NaN	17769	30	0	2533.8	0.214				-1	 	0	75	552.3056841296963	1102.5968153261924	2	552.306884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1452	2471	3924
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3926	15.311	NaN	3989.6	30	0	835.95	0.106	+			1408	AEVTSHAA	8	48	393.1927733720342	784.3709938108684	2	393.1930847167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEVTSHAA_	ENSG00000050405|ENST00000341247|LIMA1;LIMA1|p.T536Lfs*38|2|0.4|ENSG00000050405|chr12:50177739-50177739|G/-|frameshift_variant;nc|ENSG00000050405|Q9UHB6-4|LIMA1	45.9519527083369	0.6193794311207887	2				NaN	NaN	0	NaN	1453	2471	3924
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3927	15.313	NaN	3441.4	30	0	594.71	0.106	+			30209	PSRLSDTTK	9	65	502.77198483355784	NaN	0	502.7721252441406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PSRLSDTTK_	ENST00000575977.1_1_17:1268334-1303424:-|nuORF	49.536043120802724	0.20989033510253738	2				NaN	NaN	0	NaN	1454	2471	3924
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3928	15.315	NaN	8531.9	30	0	3462.9	0.106	+			5644	AVDDKQLRK	9	49	358.2082212642963	1071.6028343930889	3	358.20843505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVDDKQLRK_	ENSG00000106344|ENST00000223073|RBM28;nc|ENSG00000106344|Q9NW13-2|RBM28;RBM28|p.K496R|1|0.23|ENSG00000106344|chr7:128321342-128321342|T/C|missense_variant;RBM28|p.M599*|2|0.24|ENSG00000106344|chr7:128315014-128315014|T/-|frameshift_variant	35.61828744233558	0.47037581924408073	2				NaN	NaN	0	NaN	1455	2471	3924
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3929	15.316	NaN	6922.6	30	0	1771	0.106	+			40237	STSGAISDK	9	58	433.21625097069426	864.4179490081885	2	433.2164001464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STSGAISDK_	ENSG00000122512|ENST00000265849|PMS2;nc|ENSG00000122512|P54278-3|PMS2	63.53385203322761	0.18415635464017938	2				NaN	NaN	0	NaN	1456	2471	3924
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3930	15.318	NaN	6159	30	0	848.57	0.038				-1	 	0	64	401.53102807141005	1201.5712548144302	3	401.8658142089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1457	2471	3924
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3931	15.319	NaN	1335.3	30	0	275.84	0.139	+			23032	KVSVSTQTK	9	51	489.2842228379524	976.5538927427049	2	489.2845764160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KVSVSTQTK_	ENSG00000015171|ENST00000381604|ZMYND11;nc|ENSG00000015171|Q15326-2|ZMYND11;nc|ENSG00000015171|Q15326-3|ZMYND11;nc|ENSG00000015171|Q15326-4|ZMYND11;nc|ENSG00000015171|Q15326-5|ZMYND11;nc|ENSG00000015171|Q15326-6|ZMYND11;ZMYND11|p.L498Afs*3|1|0.3|ENSG00000015171|chr10:248592-248602|GAGAAGCTCTG/-|frameshift_variant	40.05817265558897	0.419577045485086	2				NaN	NaN	0	NaN	1458	2471	3924
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3946	15.352	NaN	53690	30	0	15380	0.214	+			50752	YEKKAAKL	8	92	475.7871596627967	949.5597663923934	2	475.78680419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YEKKAAKL_	ENSG00000189403|ENST00000341423|HMGB1;nc|ENSG00000067066|P23497|SP100	87.69643885390035	0.28444366722805053	2				NaN	NaN	0	NaN	1470	2474	3945
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3947	15.356	NaN	14767	30	0	3291.9	0.106	+			4379	ATHAGLYRK	9	65	339.5258350179238	1015.5556756539713	3	339.5260314941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATHAGLYRK_	ENSG00000039650|ENST00000322344|PNKP;ENST00000593706.3_1_19:50365412-50367307:-|nuORF;ENST00000593946.5_1_19:50364507-50370327:-|nuORF;ENST00000594661.5_1_19:50364507-50367546:-|nuORF;nc|ENSG00000039650|Q96T60-2|PNKP	35.61828744233558	0.47037581924408073	2				NaN	NaN	0	NaN	1471	2474	3945
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3948	15.358	NaN	21251	30	0	5763.4	0.106	+			39755	STITKIHSK	9	80	507.8002147773959	1013.5858766215919	2	507.8009033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STITKIHSK_	ENSG00000138593|ENST00000559471|SECISBP2L;nc|ENSG00000138593|Q93073-2|SECISBP2L	186.41076107051632	0.0006524797715399015	2				NaN	NaN	0	NaN	1472	2474	3945
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3949	15.359	NaN	7571.9	30	0	2393.6	0.106				-1	VVQGVKMLY	9	48	351.53274039462224	1051.5763917840668	3	351.5330810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_VVQGVKM(Oxidation (M))LY_	ENSG00000033178|ENST00000322244|UBA6;nc|ENSG00000033178|A0AVT1-2|UBA6	34.172542307311794	0.4838870758800184	2				NaN	NaN	0	NaN	1473	2474	3945
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3950	15.361	NaN	1514.2	30	0	216	0.106			+	19844	KEEEVKKNQ	9	49	566.3038940429688	NaN	0	566.3038940429688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEEEVKKNQ_	REV__GIGYF2|p.E1119K|1|0.19|ENSG00000204120|chr2:232845781-232845781|G/A|missense_variant	65.46538089061403	0.1260090208616529	2				NaN	NaN	0	NaN	1474	2474	3945
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3951	15.363	NaN	4268.6	30	0	622.45	0.106			+	21834	KRGIGTSH	8	51	428.2431945800781	NaN	0	428.2431945800781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KRGIGTSH_	REV__ENSG00000172031|ENST00000370383|EPHX4	65.80317337860623	1.7418937515398478	2				NaN	NaN	0	NaN	1475	2474	3945
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3952	15.365	NaN	2347.3	30	0	497.35	0.034			+	23024	KVSRIIDE	8	55	480.2789283454421	958.5433037576843	2	480.2791748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KVSRIIDE_	REV__ENSG00000099260|ENST00000263174|PALMD;REV__nc|ENSG00000099260|Q9NP74-2|PALMD	68.78682469695295	0.41700713582915416	2				NaN	NaN	0	NaN	1476	2474	3945
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3964	15.39	NaN	12928	30	0	3357.6	0.214				-1	 	0	76	509.2874164437819	1016.5602799543639	2	509.2879943847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1485	2477	3963
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3965	15.394	NaN	12134	30	0	1952.9	0.106				-1	 	0	59	458.2238344003158	914.4331158674316	2	458.2242431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1486	2477	3963
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3966	15.396	NaN	19396	30	0	1942.7	0.106	+			2662	AQNAKVIEK	9	84	500.79272656805824	NaN	0	500.79290771484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AQNAKVIEK_	ENSG00000018610|ENST00000644802|STEEP1;ENST00000469448.1_1_X:118673692-118676584:-|nuORF;nc|ENSG00000018610|Q9H5V9-2|STEEP1;nc|ENSG00000018610|Q9H5V9-3|STEEP1	163.1509380574825	0.013195146407114593	2				NaN	NaN	0	NaN	1487	2477	3963
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3967	15.398	NaN	5368.8	30	0	717.37	0.106	+			15610	GVKGGDVPK	9	52	428.7469334890735	855.479314044947	2	428.7478332519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GVKGGDVPK_	ENSG00000198771|ENST00000367854|RCSD1;nc|ENSG00000198771|Q6JBY9-2|RCSD1;RCSD1|p.P353L|1|0.14|ENSG00000198771|chr1:167697682-167697682|C/T|missense_variant	122.1759843771914	0.019882474861609503	2				NaN	NaN	0	NaN	1488	2477	3963
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3968	15.4	NaN	21302	30	0	4521	0.106	+			2661	AQNAKVIEK	9	71	334.19743307086424	999.5704698127927	3	334.19769287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AQNAKVIEK_	ENSG00000018610|ENST00000644802|STEEP1;ENST00000469448.1_1_X:118673692-118676584:-|nuORF;nc|ENSG00000018610|Q9H5V9-2|STEEP1;nc|ENSG00000018610|Q9H5V9-3|STEEP1	65.46538089061403	0.16805504838372562	2				NaN	NaN	0	NaN	1489	2477	3963
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3969	15.401	NaN	2569.8	30	0	385.29	0.106	+			13970	GSAQPGMAK	9	54	423.70991088058486	845.4052688279697	2	423.7103576660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GSAQPGMAK_	ENSG00000162105|ENST00000601538|SHANK2;nc|ENSG00000162105|Q9UPX8-1|SHANK2;nc|ENSG00000162105|Q9UPX8-4|SHANK2	51.19269402634007	0.2889735674168909	2				NaN	NaN	0	NaN	1490	2477	3963
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3970	15.403	NaN	985.74	30	0	129.32	0.036	+			37242	SKTFCRAQI	9	35	527.2794189453125	NaN	0	527.2794189453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SKTFCRAQI_	EHF|p.K201Sfs*18|1|0.2|ENSG00000135373|chr11:34656961-34656961|A/-|frameshift_variant;ENSG00000135373|ENST00000257831|EHF;nc|ENSG00000135373|Q9NZC4-3|EHF	21.68575002086885	0.36358557434667943	2				NaN	NaN	0	NaN	1491	2477	3963
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3984	15.433	NaN	86681	30	0	33648	0.166			+	39765	STIVPTTDTR	10	65	364.19580185745247	1089.5655761725575	3	364.196044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STIVPTTDTR_	REV__ENSG00000163867|ENST00000357182|ZMYM6;REV__ENST00000493328.5_1_1:35455862-35480681:-|nuORF;REV__nc|ENSG00000163867|O95789-1|ZMYM6;REV__ZMYM6|p.F804Lfs*6|1|0.38|ENSG00000163867|chr1:34988670-34988670|A/-|frameshift_variant;REV__ZMYM6|p.I637Yfs*14|1|0.36|ENSG00000163867|chr1:35005177-35005177|T/-|frameshift_variant;REV__ZMYM6|p.L686Ifs*41|1|0.03|ENSG00000163867|chr1:34992324-34992325|-/GAAAGGAAAAGAAAAT|frameshift_variant;REV__ZMYM6|p.N1298Ifs*9|1|0.15|ENSG00000163867|chr1:34987189-34987189|T/-|frameshift_variant;REV__ZMYM6|p.N724Mfs*15|1|0.42|ENSG00000163867|chr1:34988911-34988911|T/-|frameshift_variant	32.81241826257853	0.6118718159329168	2				NaN	NaN	0	NaN	1502	2480	3983
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3985	15.436	NaN	14292	30	0	2250.8	0.106	+			16750	HLQTITLDN	9	75	352.18877423398595	1053.544493302158	3	352.18896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HLQTITLDN_	ENSG00000186001|ENST00000425562|LRCH3;nc|ENSG00000186001|Q96II8-2|LRCH3;nc|ENSG00000186001|Q96II8-3|LRCH3;nc|ENSG00000186001|Q96II8-4|LRCH3	37.81151784470057	0.4459294069877048	2				NaN	NaN	0	NaN	1503	2480	3983
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3986	15.438	NaN	35479	30	0	10706	0.106			+	-1	SVKMCTIRK	9	66	374.8755301206928	1121.6047609622785	3	374.8758239746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SVKMC(Carbamidomethyl (C))TIRK_	REV__ENSG00000121904|ENST00000373381|CSMD2;REV__nc|ENSG00000121904|Q7Z408|CSMD2	24.519189625965996	0.574102787014149	2				NaN	NaN	0	NaN	1504	2480	3983
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3987	15.44	NaN	2292.4	30	0	953.7	0.106				-1	FQVCHIVLG	9	34	358.1922960962901	1071.5550588890703	3	358.1924133300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_FQVC(Carbamidomethyl (C))HIVLG_	ENSG00000170832|ENST00000300896|USP32;nc|ENSG00000170832|Q8NFA0-2|USP32;USP32|p.G1453Afs*14|1|0.37|ENSG00000170832|chr17:60181514-60181514|C/-|frameshift_variant	15.641811463095205	0.6112419832031292	2				NaN	NaN	0	NaN	1505	2480	3983
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3988	15.441	NaN	5021.8	30	0	735.89	0.106			+	43652	TISPKKGDG	9	67	451.74964847072306	901.4847440082461	2	451.75042724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TISPKKGDG_	REV__ENSG00000092847|ENST00000373204|AGO1	44.116797842482775	0.37197099687881774	2				NaN	NaN	0	NaN	1506	2480	3983
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3989	15.443	NaN	4577.5	30	0	858.78	0.106			+	25961	LSILLSEDPGR	11	55	400.5588320826142	1198.6546668480426	3	400.5580749511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSILLSEDPGR_	REV__ENSG00000161649|ENST00000317310|CD300LG;REV__nc|ENSG00000161649|Q6UXG3-2|CD300LG;REV__nc|ENSG00000161649|Q6UXG3-3|CD300LG;REV__nc|ENSG00000161649|Q6UXG3-4|CD300LG;REV__nc|ENSG00000161649|Q6UXG3-5|CD300LG	39.252832667884924	0.5681665794958463	2				NaN	NaN	0	NaN	1507	2480	3983
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3990	15.445	NaN	94651	30	0	24853	0.037	+			44587	TTCSKVFKK	9	102	366.87024940196454	1097.5889188060937	3	366.87060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_TTC(Carbamidomethyl (C))SKVFKK_	ENSG00000167625|ENST00000301215|ZNF526	98.58198989935565	0.04066992115528678	2				NaN	NaN	0	NaN	1508	2480	3983
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4003	15.472	NaN	26039	30	0	9658.4	0.214	+			15555	GVFKETKQK	9	73	355.5412334797039	1063.6018710393118	3	355.5413818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVFKETKQK_	ENSG00000119927|ENST00000348367|GPAM	82.24051045832904	0.08786059719216216	2				NaN	NaN	0	NaN	1518	2483	4002
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4004	15.475	NaN	13661	30	0	6690.8	0.106	+			19334	KAKDIYDALMT	11	65	423.5573900488892	1267.6503407468676	3	423.5576477050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KAKDIYDALMT_	tr|U7SYW7|U7SYW7_FUSNURibonucleoside-diphosphatereductaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00841PE=3SV=1	43.650786325866115	0.5079891456189096	2				NaN	NaN	0	NaN	1519	2483	4002
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4005	15.477	NaN	9257.2	30	0	5327.5	0.106				-1	CMIVREMCKE	10	55	649.7906044938206	1297.5666560544412	2	649.78955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_C(Carbamidomethyl (C))MIVREMCKE_	NCKIPSD|p.R704C|1|0.26|ENSG00000213672|chr3:48674603-48674603|G/A|missense_variant	51.33545320467046	0.4446945571623749	2				NaN	NaN	0	NaN	1520	2483	4002
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4006	15.479	NaN	10020	30	0	4911.9	0.106				-1	SIAFQMPTIAK	11	47	408.22216241053104	1221.6446578317932	3	408.2225646972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_SIAFQM(Oxidation (M))PTIAK_	ENSG00000198626|ENST00000366574|RYR2;nc|ENSG00000198626|Q92736-2|RYR2;RYR2|p.D3347Tfs*10|1|0.36|ENSG00000198626|chr1:237708990-237708990|G/-|frameshift_variant;RYR2|p.S4583Lfs*11|1|0.45|ENSG00000198626|chr1:237792286-237792286|T/-|frameshift_variant	34.08650109265054	0.6322515996262609	2				NaN	NaN	0	NaN	1521	2483	4002
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4007	15.481	NaN	197890	30	0	23581	0.106	+			30919	QELEKAKR	8	105	501.2905236198386	1000.5664943064772	2	501.2906494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QELEKAKR_	ENSG00000133026|ENST00000360416|MYH10;ENST00000465458.1_1_17:8409499-8413222:-|nuORF;nc|ENSG00000133026|P35580-2|MYH10;nc|ENSG00000133026|P35580-3|MYH10;nc|ENSG00000133026|P35580-5|MYH10;nc|ENSG00000133026|P35580|MYH10	87.69643885390035	0.28444366722805053	2				NaN	NaN	0	NaN	1522	2483	4002
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4008	15.482	NaN	1724.1	30	0	431.2	0.037			+	-1	TVKGWTMRK	9	38	374.8755301206928	1121.6047609622785	3	374.8761901855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_TVKGWTM(Oxidation (M))RK_	REV__ENSG00000172215|ENST00000304552|CXCR6	24.519189625965996	0.574102787014149	2				NaN	NaN	0	NaN	1523	2483	4002
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4009	15.483	NaN	1450	30	0	347.5	0.141				-1	ALKNKFSCL	9	38	360.8668622217649	1079.5787572654947	3	360.8671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_ALKNKFSC(Carbamidomethyl (C))L_	ENSG00000173401|ENST00000378695|GLIPR1L1;nc|ENSG00000173401|Q6UWM5-2|GLIPR1L1	35.61828744233558	0.47037581924408073	2				NaN	NaN	0	NaN	1524	2483	4002
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4023	15.514	NaN	35985	30	0	4892	0.215	+			34097	RSQKPVMVK	9	81	536.8178265358825	1071.621100138565	2	536.8189086914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RSQKPVMVK_	ENSG00000108107|ENST00000344063|RPL28;ENST00000412461.2_1_22:19043875-19044022:+|nuORF;ENST00000560583.5_1_19:55899571-55899697:+|nuORF	94.4091291819064	0.0524345700464502	2				NaN	NaN	0	NaN	1535	2486	4022
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4024	15.517	NaN	16395	30	0	8338.7	0.106			+	-1	MLNELFIK	8	75	512.2818451951783	NaN	0	512.2817993164062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_M(Oxidation (M))LNELFIK_	REV__HGSNAT|p.W633Lfs*34|1|0.3|ENSG00000165102|chr8:43199552-43199553|-/T|frameshift_variant	51.33545320467046	1.7418937515398478	2				NaN	NaN	0	NaN	1536	2486	4022
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4025	15.519	NaN	7023.3	30	0	2404.9	0.106			+	33159	RETGESQYR	9	66	563.2674744164958	1124.5203958997915	2	563.2684936523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RETGESQYR_	REV__FLG|p.H3957R|1|0.15|ENSG00000143631|chr1:152303016-152303016|T/C|missense_variant	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	1537	2486	4022
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4026	15.521	NaN	14017	30	0	2232.6	0.106			+	30815	QEDWWKHA	8	64	550.2509331448866	1098.4873133565732	2	550.251708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QEDWWKHA_	REV__ENSG00000132423|ENST00000254759|COQ3	45.9519527083369	0.6193794311207887	2				NaN	NaN	0	NaN	1538	2486	4022
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4027	15.523	NaN	4892.8	30	0	574.02	0.106	+			13704	GPRKGREVY	9	63	531.2955350151925	1060.576517097185	2	531.2967529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GPRKGREVY_	ENSG00000063177|ENST00000549920|RPL18;ENST00000416734.1_1_7:121080890-121081274:-|nuORF;ENST00000547892.1_1_19:49119132-49119324:-|nuORF;ENST00000549533.1_1_19:49118631-49119324:-|nuORF;ENST00000551749.5_1_19:49119132-49119489:-|nuORF;ENST00000552347.5_1_19:49118631-49119489:-|nuORF;nc|ENSG00000063177|Q07020-2|RPL18	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	1539	2486	4022
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4028	15.525	NaN	2064.7	30	0	352.94	0.037	+			27745	MQNMSIHTK	9	42	369.1755855134832	1104.5049271406497	3	369.1759948730469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_MQNM(Oxidation (M))SIHTK_	CON__H-INV:HIT000292931;CON__P05787;CON__REFSEQ:XP_092267;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	40.05817265558897	0.419577045485086	2				NaN	NaN	0	NaN	1540	2486	4022
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4029	15.525	NaN	2894.1	30	0	441.76	0.139			+	26830	LVTGCAIW	8	55	460.24041748046875	NaN	0	460.24041748046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_LVTGC(Carbamidomethyl (C))AIW_	REV__ENST00000371157.7_1_X:123195083-123195134:+|nuORF	44.53106598305862	1.7418937515398478	2				NaN	NaN	0	NaN	1541	2486	4022
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4043	15.556	NaN	151680	30	0	85937	0.208	+			5220	ATTTTVTTK	9	75	462.25535868568676	922.4961644381735	2	462.2556457519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATTTTVTTK_	ENSG00000163349|ENST00000426820|HIPK1;HIPK1|p.N462*|1|0.27|ENSG00000163349|chr1:113955620-113955621|-/T|frameshift_variant;nc|ENSG00000163349|Q86Z02-2|HIPK1	159.27591364854348	0.004707062175358555	2				NaN	NaN	0	NaN	1552	2489	4042
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4044	15.559	NaN	12387	30	0	2751.5	0.106			+	8267	EAGRGEGRAK	10	77	515.7740805786196	1029.5336082240392	2	515.7734985351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EAGRGEGRAK_	REV__ENST00000396212.6_1_16:19535341-19537178:+|nuORF	56.43379154798735	0.3982744522255666	2				NaN	NaN	0	NaN	1553	2489	4042
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4045	15.561	NaN	2270.4	30	0	229.75	0.106			+	32246	QTKLNVKR	8	57	493.80900443240466	985.6034559316093	2	493.8086242675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QTKLNVKR_	REV__ENSG00000115705|ENST00000329066|TPO;REV__nc|ENSG00000115705|P07202-2|TPO;REV__nc|ENSG00000115705|P07202-3|TPO;REV__nc|ENSG00000115705|P07202-4|TPO;REV__nc|ENSG00000115705|P07202-5|TPO;REV__nc|ENSG00000115705|P07202-6|TPO;REV__nc|ENSG00000115705|P07202-7|TPO;REV__nc|ENSG00000115705|P07202-8|TPO;REV__TPO|p.I241Tfs*18|1|0.13|ENSG00000115705|chr2:1456184-1456185|-/C|frameshift_variant	47.91560031466742	0.6071945918984287	2				NaN	NaN	0	NaN	1554	2489	4042
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4046	15.563	NaN	2308	30	0	460.98	0.035	+			30947	QEMKFFIP	8	53	520.2687990201623	1038.5230451071245	2	520.2703247070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QEMKFFIP_	DNAH3|p.E3315Dfs*37|1|0.1|ENSG00000158486|chr16:20963939-20963940|-/A|frameshift_variant;DNAH3|p.G2194Efs*14|1|0.34|ENSG00000158486|chr16:20997303-20997303|C/-|frameshift_variant;DNAH3|p.I2375Sfs*8|1|0.13|ENSG00000158486|chr16:20985619-20985619|T/-|frameshift_variant;DNAH3|p.V2829Yfs*9|1|0.43|ENSG00000158486|chr16:20965399-20965399|C/-|frameshift_variant;ENSG00000158486|ENST00000698260|DNAH3;nc|ENSG00000158486|Q8TD57-2|DNAH3;nc|ENSG00000158486|Q8TD57-3|DNAH3;nc|ENSG00000158486|Q8TD57|DNAH3	52.29916861842294	0.578018602984656	2				NaN	NaN	0	NaN	1555	2489	4042
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4061	15.594	NaN	38985	30	0	8147.2	0.214	+			2920	ASCNQTLSK	9	87	504.74198948067294	1007.4694260281459	2	504.74261474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_ASC(Carbamidomethyl (C))NQTLSK_	ENSG00000155256|ENST00000684270|ZFYVE27;ENST00000477521.5_1_10:99516996-99519054:+|nuORF;nc|ENSG00000155256|Q5T4F4-2|ZFYVE27;nc|ENSG00000155256|Q5T4F4-3|ZFYVE27;nc|ENSG00000155256|Q5T4F4-5|ZFYVE27;nc|ENSG00000155256|Q5T4F4-6|ZFYVE27;nc|ENSG00000155256|Q5T4F4-7|ZFYVE27;nc|ENSG00000155256|Q5T4F4-8|ZFYVE27	187.50397467658743	0.0005427347354732084	2				NaN	NaN	0	NaN	1567	2492	4060
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4062	15.598	NaN	7660.4	30	0	1514.2	0.106			+	20977	KKFEEPKK	8	67	517.3044256350619	1032.5942983369237	2	517.3045654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KKFEEPKK_	REV__DNAH7|p.S3691Afs*11|1|0.37|ENSG00000118997|chr2:195775977-195775977|T/-|frameshift_variant;REV__ENSG00000118997|ENST00000312428|DNAH7;REV__nc|ENSG00000118997|Q8WXX0-2|DNAH7	93.19546047674547	0.2677966331495483	2				NaN	NaN	0	NaN	1568	2492	4060
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4063	15.6	NaN	44907	30	0	10654	0.106	+			47590	VRQEMRRQ	8	73	368.2009410747933	1101.58099382458	3	368.2012939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VRQEMRRQ_	ENSG00000015285|ENST00000376701|WAS;WAS|p.P353Hfs*92|1|0.59|ENSG00000015285|chrX:48688782-48688782|C/-|frameshift_variant	40.5726180659479	0.6527593143185008	2				NaN	NaN	0	NaN	1569	2492	4060
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4064	15.602	NaN	3367.1	30	0	1990.2	0.106			+	37056	SISATKELG	9	53	453.24989257667266	904.4852322201453	2	453.25042724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SISATKELG_	REV__ENSG00000026950|ENST00000289361|BTN3A1;REV__ENSG00000111801|ENST00000244519|BTN3A3;REV__ENSG00000186470|ENST00000377708|BTN3A2;REV__ENST00000082468.11_1_6:26405791-26410201:+|nuORF;REV__ENST00000480110.5_1_6:26445933-26448699:+|nuORF;REV__ENST00000531055.1_1_6:26370743-26373574:+|nuORF;REV__ENST00000532294.1_1_6:26370710-26373574:+|nuORF;REV__nc|ENSG00000026950|O00481-2|BTN3A1;REV__nc|ENSG00000026950|O00481-3|BTN3A1;REV__nc|ENSG00000026950|O00481-4|BTN3A1;REV__nc|ENSG00000111801|O00478-2|BTN3A3;REV__nc|ENSG00000186470|P78410-2|BTN3A2;REV__nc|ENSG00000186470|P78410-3|BTN3A2	26.69291269510374	0.5537881896960711	2				NaN	NaN	0	NaN	1570	2492	4060
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4065	15.603	NaN	7089.8	30	0	4462.7	0.106				-1	 	0	52	413.22635123355514	824.4381495339103	2	413.2268981933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1571	2492	4060
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4066	15.605	NaN	6794.9	30	0	2261.4	0.036				-1	ATVDKTVCK	9	46	341.18277417770815	1020.5264931333245	3	341.18310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_ATVDKTVC(Carbamidomethyl (C))K_	ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1670Tfs*23|1|0.29|ENSG00000174231|chr17:1659487-1659487|C/-|frameshift_variant	25.125986553469783	0.568431947241088	2				NaN	NaN	0	NaN	1572	2492	4060
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4067	15.606	NaN	17745	30	0	3952.5	0.138				-1	 	0	72	422.7291850996287	843.4438172660574	2	422.7298583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1573	2492	4060
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4082	15.64	NaN	47470	30	0	15244	0.214			+	41172	SVKTTTTIVT	10	78	350.8729450911472	1049.5970058736416	3	350.8732604980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVKTTTTIVT_	REV__ENSG00000124827|ENST00000379491|GCM2;REV__GCM2|p.A398Cfs*6|1|0.45|ENSG00000124827|chr6:10874325-10874326|-/G|frameshift_variant	42.33807565288922	0.5276008846745733	2				NaN	NaN	0	NaN	1585	2495	4081
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4083	15.643	NaN	44267	30	0	23363	0.106	+			403	AASSSSLEK	9	65	440.2242758423073	878.4339987514146	2	440.22503662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AASSSSLEK_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196834|ENST00000451531|POTEI;ENST00000417985.1_1_X:46147855-46148119:-|nuORF;ENST00000418987.2_1_9:103493819-103494230:+|nuORF;ENST00000423183.1_1_3:12112396-12112453:+|nuORF;ENST00000450451.1_1_1:238090483-238090852:+|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2	109.47833844074708	0.029530294723441826	2				NaN	NaN	0	NaN	1586	2495	4081
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4084	15.645	NaN	5846.9	30	0	1406.1	0.106	+			4596	ATLHGSNMK	9	57	479.74183680877496	957.46912068435	2	479.741943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATLHGSNMK_	ENSG00000198804|ENST00000361624|MT-CO1;L1PA6_dup546|chr2:49227587-49231532:-|4.547726375381561|0.2927699401366612|3.96|483.0|61|2|sense	35.15202426646627	0.4747332964206883	2				NaN	NaN	0	NaN	1587	2495	4081
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4085	15.647	NaN	7306.3	30	0	1557.2	0.106				-1	 	0	64	451.73199817477166	901.4494434163433	2	451.7321472167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1588	2495	4081
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4086	15.649	NaN	2328.9	30	0	408.9	0.106	+			33010	REGGTHQQL	9	52	513.2592426052336	1024.503932277267	2	513.2597045898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_REGGTHQQL_	ENSG00000168394|ENST00000354258|TAP1;nc|ENSG00000168394|Q03518-2|TAP1	61.691277971877994	0.19951612995419254	2				NaN	NaN	0	NaN	1589	2495	4081
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4087	15.651	NaN	9148.9	30	0	1585.7	0.031				-1	 	0	45	360.7284337556437	719.4423145780875	2	360.7286376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1590	2495	4081
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4088	15.651	NaN	2555.8	30	0	347.62	0.138				-1	 	0	51	455.2787650875469	908.5429772418938	2	455.2790222167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1591	2495	4081
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4100	15.679	NaN	178360	30	0	31459	0.161	+			41600	SVQHVDAAEK	10	93	542.2740621245147	1082.5335713158292	2	542.27490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVQHVDAAEK_	ENST00000585682.5_1_4:159092526-159092595:-|nuORF	150.15188659993407	0.008468567113416427	2				NaN	NaN	0	NaN	1600	2498	4099
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4101	15.682	NaN	14233	30	0	3271.1	0.106				-1	STVCPFTQQ	9	65	534.2453286210095	1066.476104308819	2	534.246826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_STVC(Carbamidomethyl (C))PFTQQ_	RAB11FIP1|p.Q714Tfs*22|1|0.3|ENSG00000156675|chr8:37872662-37872663|-/T|frameshift_variant	53.351449002276354	0.2690372970092375	2				NaN	NaN	0	NaN	1601	2498	4099
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4102	15.684	NaN	5514.7	30	0	2403.5	0.106				-1	CSSELKNRME	10	44	606.7709705932758	1211.5273882533515	2	606.7713012695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_CSSELKNRM(Oxidation (M))E_	ENSG00000145632|ENST00000274289|PLK2	25.57405402267927	0.6709832231498071	2				NaN	NaN	0	NaN	1602	2498	4099
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4103	15.686	NaN	6466.5	30	0	2379.6	0.106			+	30680	QCFTRPLK	8	60	496.7719598795345	NaN	0	496.77197265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QCFTRPLK_	REV__ENSG00000167658|ENST00000309311|EEF2;REV__ENST00000598182.5_1_19:3980752-3982305:-|nuORF	71.29570347882199	1.7418937515398478	2				NaN	NaN	0	NaN	1603	2498	4099
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4104	15.688	NaN	3837.6	30	0	1067.4	0.106				-1	ATCGQSFKH	9	44	345.82715026817647	1034.4596214047294	3	345.8274230957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_ATC(Carbamidomethyl (C))GQSFKH_	ENSG00000261221|ENST00000568956|ZNF865	35.15202426646627	0.4747332964206883	2				NaN	NaN	0	NaN	1604	2498	4099
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4105	15.689	NaN	3661.5	30	0	353.97	0.106			+	26882	LWNMGKLQ	8	50	330.51406407296787	NaN	0	330.51409912109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LWNMGKLQ_	REV__ENSG00000128908|ENST00000648947|INO80;REV__ENST00000561172.1_1_15:41361731-41364163:-|nuORF;REV__INO80|p.R1318Gfs*6|1|0.16|ENSG00000128908|chr15:40984322-40984322|T/-|frameshift_variant;REV__INO80|p.R874Ifs*42|1|0.05|ENSG00000128908|chr15:41048233-41048234|-/AT|frameshift_variant	35.200714571348534	1.7418937515398478	2				NaN	NaN	0	NaN	1605	2498	4099
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4106	15.691	NaN	6561.8	30	0	890.8	0.037	+			1251	AERRNIHKL	9	52	379.5593443533751	1135.6562036603252	3	379.5596923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AERRNIHKL_	ENSG00000041357|ENST00000044462|PSMA4;ENST00000557929.5_1_15:78834269-78838932:+|nuORF;ENST00000560033.5_1_15:78834730-78834988:+|nuORF	47.657333605630114	0.33044192980041115	2				NaN	NaN	0	NaN	1606	2498	4099
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4119	15.719	NaN	6810.2	30	0	2430.3	0.214			+	40368	STTTQTISQ	9	58	483.73997978293784	965.4654066326757	2	483.740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STTTQTISQ_	REV__ENSG00000173572|ENST00000342929|NLRP13;REV__NLRP13|p.F460Sfs*10|1|0.2|ENSG00000173572|chr19:55912438-55912438|A/-|frameshift_variant;REV__NLRP13|p.F543Lfs*8|1|0.42|ENSG00000173572|chr19:55912188-55912188|A/-|frameshift_variant	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	1616	2501	4118
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4120	15.723	NaN	3990.9	30	0	580.17	0.106			+	9960	EREGKKISGA	10	64	537.798191676801	NaN	0	537.7932739257812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EREGKKISGA_	REV__CLIP1|p.E992Lfs*32|1|0.2|ENSG00000130779|chr12:122328315-122328321|TGCTTCT/-|frameshift_variant;REV__CLIP1|p.M1151Wfs*8|1|0.31|ENSG00000130779|chr12:122316771-122316771|T/-|frameshift_variant;REV__ENSG00000130779|ENST00000620786|CLIP1;REV__nc|ENSG00000130779|P30622-1|CLIP1;REV__nc|ENSG00000130779|P30622-2|CLIP1	49.536043120802724	0.30853568297719935	2				NaN	NaN	0	NaN	1617	2501	4118
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4121	15.725	NaN	8922.3	30	0	1533.9	0.106				-1	 	0	62	465.2738456268585	928.533138320517	2	465.2737731933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1618	2501	4118
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4122	15.726	NaN	5176	30	0	897.63	0.106	+			16330	HEKQESQDL	9	68	557.261507193308	1112.508461453416	2	557.2626342773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HEKQESQDL_	ENSG00000137804|ENST00000559596|NUSAP1;ENST00000558123.5_1_15:41625112-41672381:+|nuORF;nc|ENSG00000137804|Q9BXS6-2|NUSAP1;nc|ENSG00000137804|Q9BXS6-3|NUSAP1;nc|ENSG00000137804|Q9BXS6-4|NUSAP1;nc|ENSG00000137804|Q9BXS6-5|NUSAP1;nc|ENSG00000137804|Q9BXS6-6|NUSAP1;nc|ENSG00000137804|Q9BXS6-7|NUSAP1	93.1432384553994	0.056003526918089595	2				NaN	NaN	0	NaN	1619	2501	4118
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4123	15.728	NaN	5858.4	30	0	1156.4	0.106				-1	 	0	59	416.2315199091436	830.4484868850873	2	416.23199462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1620	2501	4118
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4124	15.73	NaN	4903.1	30	0	2702.7	0.036			+	32663	RAAQVASLQI	10	47	528.8108487229262	1055.6071445126522	2	528.8119506835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RAAQVASLQI_	REV__ENSG00000186432|ENST00000334256|KPNA4;REV__KPNA4|p.M441Wfs*9|1|0.12|ENSG00000186432|chr3:160508158-160508158|T/-|frameshift_variant	31.529811441608018	0.6223461015008678	2				NaN	NaN	0	NaN	1621	2501	4118
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4125	15.731	NaN	6561.1	30	0	2469.3	0.139			+	29041	NTAAPQPA	8	45	385.1952676780242	768.3759824228484	2	385.1953430175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NTAAPQPA_	REV__ENSG00000017260|ENST00000510168|ATP2C1;REV__ENST00000513636.1_1_3:130672694-130678186:+|nuORF;REV__nc|ENSG00000017260|P98194-2|ATP2C1;REV__nc|ENSG00000017260|P98194-3|ATP2C1;REV__nc|ENSG00000017260|P98194-4|ATP2C1;REV__nc|ENSG00000017260|P98194-5|ATP2C1;REV__nc|ENSG00000017260|P98194-6|ATP2C1;REV__nc|ENSG00000017260|P98194-7|ATP2C1;REV__nc|ENSG00000017260|P98194-8|ATP2C1;REV__nc|ENSG00000017260|P98194-9|ATP2C1	33.51558372728122	0.7005509609380386	2				NaN	NaN	0	NaN	1622	2501	4118
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4138	15.757	NaN	6267.3	30	0	1429.9	0.214	+			25248	LNINEDTETS	10	69	568.2591942928855	1134.5038356525708	2	568.26025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LNINEDTETS_	ABCA13|p.A4442Pfs*3|1|0.06|ENSG00000179869|chr7:48506365-48506365|G/-|frameshift_variant;ABCA13|p.H2188Ifs*3|1|0.11|ENSG00000179869|chr7:48276226-48276226|C/-|frameshift_variant;ABCA13|p.K3855Nfs*139|1|0.3|ENSG00000179869|chr7:48389131-48389153|GGCTGTGGTCCAAGACCTCAGCC/-|frameshift_variant;ENSG00000179869|ENST00000435803|ABCA13;nc|ENSG00000179869|Q86UQ4-4|ABCA13;nc|ENSG00000179869|Q86UQ4|ABCA13	31.529811441608018	0.6223461015008678	2				NaN	NaN	0	NaN	1632	2504	4137
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4139	15.76	NaN	2802	30	0	298.83	0.106			+	14762	GTKRILSE	8	54	452.26603592771943	902.5175189222389	2	452.2662048339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTKRILSE_	REV__ENSG00000145386|ENST00000274026|CCNA2	24.20275056022122	0.7724576178584145	2				NaN	NaN	0	NaN	1633	2504	4137
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4140	15.762	NaN	2199.5	30	0	221.25	0.106			+	21675	KQCQDLKTQ	9	64	546.2787152095186	1090.5428774858372	2	546.2794189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KQCQDLKTQ_	REV__ENSG00000127603|ENST00000564288|MACF1;REV__ENST00000476350.1_1_1:39768622-39838291:+|nuORF;REV__MACF1|p.A5223Lfs*8|1|0.21|ENSG00000127603|chr1:39388486-39388486|G/-|frameshift_variant;REV__MACF1|p.N4824Kfs*19|1|0.33|ENSG00000127603|chr1:39387292-39387293|-/A|frameshift_variant;REV__MACF1|p.S2157Ffs*3|1|0.37|ENSG00000127603|chr1:39333036-39333037|-/T|frameshift_variant;REV__MACF1|p.T4896Lfs*29|1|0.27|ENSG00000127603|chr1:39387507-39387507|A/-|frameshift_variant;REV__nc|ENSG00000127603|Q9UPN3-2|MACF1;REV__nc|ENSG00000127603|Q9UPN3-3|MACF1;REV__nc|ENSG00000127603|Q9UPN3-4|MACF1;REV__nc|ENSG00000127603|Q9UPN3|MACF1	77.31757898189308	0.1091473830098891	2				NaN	NaN	0	NaN	1634	2504	4137
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4141	15.764	NaN	1685.1	30	0	139.2	0.106	+			31125	QGAVTLETTVS	11	64	553.2927242186342	1104.5708955040684	2	553.2931518554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QGAVTLETTVS_	ENSG00000065029|ENST00000373953|ZNF76;nc|ENSG00000065029|P36508-2|ZNF76	58.22992032128504	0.3392555181951113	2				NaN	NaN	0	NaN	1635	2504	4137
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4142	15.766	NaN	34435	30	0	3850.6	0.106			+	50343	WVFWVADCACL	11	88	457.2073405576738	1368.6001922732214	3	457.20751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_WVFWVADCAC(Carbamidomethyl (C))L_	REV__TLR7|p.T788A|1|0.63|ENSG00000196664|chrX:12887870-12887870|A/G|missense_variant	43.650786325866115	0.5079891456189096	2				NaN	NaN	0	NaN	1636	2504	4137
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4143	15.768	NaN	1483.9	30	0	260.78	0.034	+			35970	SEGTKAVTK	9	56	460.755126953125	NaN	0	460.755126953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SEGTKAVTK_	ENSG00000124635|ENST00000339812|H2BC11;ENSG00000146047|ENST00000274764|H2BC1;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000196890|ENST00000693095|H2BC26;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000369385.5_1_1:149814898-149814982:+|nuORF;ENST00000436555.1_1_1:228651916-228652012:-|nuORF;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;HIST1H2BD|p.Y122H|1|0.36|ENSG00000158373|chr6:26158533-26158533|T/C|missense_variant;nc|ENSG00000203814|Q5QNW6-2|H2BC18;nc|ENSG00000285480|A0A2R8Y619|H2BK1	40.05817265558897	0.275207446262312	2				NaN	NaN	0	NaN	1637	2504	4137
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4144	15.768	NaN	3430.6	30	0	395.95	0.139	+			36679	SGNANMVNK	9	63	467.7261766621291	933.4378003910582	2	467.72576904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SGNANMVNK_	ENSG00000184432|ENST00000333188|COPB2;nc|ENSG00000184432|P35606-2|COPB2	52.936696900407355	0.27249468807391813	2				NaN	NaN	0	NaN	1638	2504	4137
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4156	15.795	NaN	41693	30	0	11579	0.214				-1	 	0	77	332.8658148970149	995.5756152912447	3	332.8660583496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1647	2507	4155
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4157	15.799	NaN	2702.9	30	0	548.86	0.106			+	-1	SVKKMTTLK	9	46	351.21047497297565	1050.609595519127	3	351.210693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_SVKKM(Oxidation (M))TTLK_	REV__ENSG00000196159|ENST00000394329|FAT4;REV__FAT4|p.E4539Rfs*31|1|0.12|ENSG00000196159|chr4:125490431-125490431|C/-|frameshift_variant;REV__FAT4|p.K4477Rfs*15|1|0.36|ENSG00000196159|chr4:125490247-125490247|G/-|frameshift_variant;REV__FAT4|p.K4532Efs*21|1|0.37|ENSG00000196159|chr4:125490410-125490411|-/G|frameshift_variant;REV__FAT4|p.K4532Rfs*38|1|0.19|ENSG00000196159|chr4:125490411-125490411|G/-|frameshift_variant;REV__FAT4|p.Q4906Rfs*14|1|0.49|ENSG00000196159|chr4:125491536-125491536|C/-|frameshift_variant;REV__nc|ENSG00000196159|Q6V0I7-2|FAT4;REV__nc|ENSG00000196159|Q6V0I7-3|FAT4;REV__nc|ENSG00000196159|Q6V0I7|FAT4	27.047317107675042	0.5504760921104335	2				NaN	NaN	0	NaN	1648	2507	4155
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4158	15.801	NaN	4464.4	30	0	1075.1	0.106	+			4716	ATMATSGSAR	10	65	476.72901496848425	951.4434770037685	2	476.7293701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATMATSGSAR_	ENSG00000141543|ENST00000649764|EIF4A3;ENST00000575957.1_1_17:78115565-78120760:-|nuORF	93.5975768576971	0.11047702954938905	2				NaN	NaN	0	NaN	1649	2507	4155
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4159	15.803	NaN	4461	30	0	1628.6	0.106	+			40156	STQQEKETIAK	11	54	421.55733051538374	1261.6501621463512	3	421.5575256347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STQQEKETIAK_	ENSG00000116459|ENST00000369722|ATP5PB	41.080066990542036	0.5431644350485484	2				NaN	NaN	0	NaN	1650	2507	4155
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4160	15.804	NaN	3362.6	30	0	407.28	0.106	+			241	AAMKGNSTLK	10	57	510.77862655237226	1019.5427001715445	2	510.77911376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AAMKGNSTLK_	ENSG00000132128|ENST00000617190|LRRC41;nc|ENSG00000132128|Q15345-3|LRRC41	82.83050618871818	0.17249597090446123	2				NaN	NaN	0	NaN	1651	2507	4155
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4161	15.806	NaN	14942	30	0	2589.6	0.035	+			39233	STAKHVFEK	9	81	523.7846601635256	1045.554767393851	2	523.78564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STAKHVFEK_	ENSG00000184445|ENST00000333479|KNTC1;ENST00000436959.7_1_12:123087118-123101977:+|nuORF;KNTC1|p.K1646Nfs*2|2|0.35|ENSG00000184445|chr12:122603073-122603073|A/-|frameshift_variant;KNTC1|p.K1646Tfs*12|1|0.13|ENSG00000184445|chr12:122603073-122603074|AA/-|frameshift_variant;KNTC1|p.L1647Tfs*12|1|0.3|ENSG00000184445|chr12:122603072-122603073|-/A|frameshift_variant;nc|ENSG00000184445|P50748-2|KNTC1	117.81106730687013	0.02252488733980868	2				NaN	NaN	0	NaN	1652	2507	4155
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4162	15.807	NaN	2605	30	0	194.63	0.141			+	31152	QGIEKARAQT	10	62	551.3056944110925	1100.596835888985	2	551.3067016601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QGIEKARAQT_	REV__ENSG00000103056|ENST00000219334|SMPD3;REV__nc|ENSG00000103056|Q9NY59-2|SMPD3;REV__SMPD3|p.R157I|1|0.28|ENSG00000103056|chr16:68371712-68371712|C/A|missense_variant	54.776311868738084	0.41334902933431344	2				NaN	NaN	0	NaN	1653	2507	4155
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4173	15.835	NaN	10937	30	0	2915	0.214	+			18915	IVNASTTNK	9	61	474.26099851329195	946.5074440933839	2	474.2611389160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IVNASTTNK_	ENSG00000078269|ENST00000355585|SYNJ2;nc|ENSG00000078269|O15056-2|SYNJ2;nc|ENSG00000078269|O15056-3|SYNJ2;SYNJ2|p.L1226Tfs*32|1|0.22|ENSG00000078269|chr6:158093029-158093030|-/C|frameshift_variant;SYNJ2|p.P1225Hfs*19|1|0.23|ENSG00000078269|chr6:158093030-158093030|C/-|frameshift_variant	114.8945686534367	0.024290463251177924	2				NaN	NaN	0	NaN	1661	2510	4172
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4174	15.838	NaN	7239.1	30	0	751.5	0.106	+			31367	QKDNLQKK	8	70	501.2905236198386	1000.5664943064772	2	501.29058837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QKDNLQKK_	ENSG00000184445|ENST00000333479|KNTC1;KNTC1|p.K1646Nfs*2|2|0.35|ENSG00000184445|chr12:122603073-122603073|A/-|frameshift_variant;KNTC1|p.K1646Tfs*12|1|0.13|ENSG00000184445|chr12:122603073-122603074|AA/-|frameshift_variant;KNTC1|p.L1647Tfs*12|1|0.3|ENSG00000184445|chr12:122603072-122603073|-/A|frameshift_variant	90.36981228632155	0.27635063874291205	2				NaN	NaN	0	NaN	1662	2510	4172
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4175	15.84	NaN	22740	30	0	8496.2	0.106	+			22556	KTSGSNVKIVK	11	78	387.57056816504024	1159.6898750953208	3	387.5712585449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KTSGSNVKIVK_	ENSG00000124172|ENST00000243997|ATP5F1E	112.10723106719422	0.035657131695213805	2				NaN	NaN	0	NaN	1663	2510	4172
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4176	15.842	NaN	6661.7	30	0	2031.4	0.106	+			19247	KADFRGQWVLM	11	66	450.9046500810664	1349.6921208433992	3	450.9049377441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KADFRGQWVLM_	nc|ENSG00000284194|O43819|SCO2	25.125986553469783	0.7262400895305658	2				NaN	NaN	0	NaN	1664	2510	4172
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4177	15.844	NaN	4668.1	30	0	988.81	0.106	+			22247	KTALKACKTPQ	11	67	594.841884969871	1187.6692170065419	2	594.842041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KTALKACKTPQ_	ENSG00000173821|ENST00000582970|RNF213;nc|ENSG00000173821|Q63HN8-4|RNF213;nc|ENSG00000173821|Q63HN8|RNF213;RNF213|p.C5022Lfs*7|1|0.3|ENSG00000173821|chr17:80389237-80389237|G/-|frameshift_variant	102.04737869847887	0.056454446805991904	2				NaN	NaN	0	NaN	1665	2510	4172
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4178	15.846	NaN	4575.5	30	0	1229.7	0.036	+			34401	RTSIPVHSK	9	47	342.20115240031873	1023.5816278011562	3	342.2014465332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RTSIPVHSK_	ENSG00000092439|ENST00000646667|TRPM7;ENST00000560849.2_2_15:50868060-50878706:-|nuORF	41.080066990542036	0.4075906340427724	2				NaN	NaN	0	NaN	1666	2510	4172
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4179	15.846	NaN	1212.5	30	0	164.89	0.14			+	34449	RTWQSQPK	8	51	515.7740805786196	1029.5336082240392	2	515.7797241210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RTWQSQPK_	REV__ENST00000221419.9_1_19:39331195-39334516:-|nuORF;REV__ENST00000388749.7_1_19:39332303-39334516:-|nuORF	47.657333605630114	0.6087971902037268	2				NaN	NaN	0	NaN	1667	2510	4172
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4194	15.88	NaN	257200	30	0	48769	0.172	+			39061	SSSRAVVVK	9	103	466.77941608023747	931.544279227275	2	466.7794494628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSSRAVVVK_	CON__H-INV:HIT000292931;CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	85.86182877749512	0.07653218437724067	2				NaN	NaN	0	NaN	1679	2513	4193
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4195	15.883	NaN	14309	30	0	1828.3	0.106			+	1576	AGIGARSSVEK	11	69	537.798191676801	NaN	0	537.801025390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AGIGARSSVEK_	REV__ENST00000328249.3_2_1:43295744-43296215:+|nuORF	83.6470233535746	0.06439060931933731	2				NaN	NaN	0	NaN	1680	2513	4193
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4196	15.885	NaN	4309.1	30	0	456.29	0.106	+			31750	QPDPQRPQ	8	73	483.24320358388087	964.4718542345618	2	483.243408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QPDPQRPQ_	ENSG00000161682|ENST00000293443|FAM171A2	71.29570347882199	0.39610197767395533	2				NaN	NaN	0	NaN	1681	2513	4193
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4197	15.887	NaN	1646.7	30	0	301.13	0.106	+			37870	SNSISVSK	8	45	411.2210964379147	820.4276399426294	2	411.2215881347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SNSISVSK_	ENST00000527401.5_1_11:45957138-45987102:-|nuORF	38.80614096846853	0.6637206697844082	2				NaN	NaN	0	NaN	1682	2513	4193
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4198	15.889	NaN	2770.4	30	0	348.41	0.106	+			20938	KKAVAVGHSQ	10	62	512.7982850849521	1023.5820172367042	2	512.798583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KKAVAVGHSQ_	ENSG00000133454|ENST00000335473|MYO18B;MYO18B|p.I1502Ffs*3|1|0.09|ENSG00000133454|chr22:25891370-25891370|A/-|frameshift_variant;MYO18B|p.K1556Sfs*19|1|0.16|ENSG00000133454|chr22:25895276-25895276|A/-|frameshift_variant;nc|ENSG00000133454|Q8IUG5-2|MYO18B;nc|ENSG00000133454|Q8IUG5-3|MYO18B	52.167168403610894	0.437078873413402	2				NaN	NaN	0	NaN	1683	2513	4193
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4199	15.891	NaN	5394.3	30	0	2111.5	0.106	+			33921	RRVGRSHS	8	57	477.7705581093169	953.5265632854338	2	477.7703857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RRVGRSHS_	ENSG00000167971|ENST00000343516|CASKIN1	19.359975847455235	0.7988239741663654	2				NaN	NaN	0	NaN	1684	2513	4193
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4200	15.892	NaN	2781	30	0	416.13	0.034			+	40807	SVDVNKGKK	9	72	487.7851605084858	973.5557680837716	2	487.7850646972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVDVNKGKK_	REV__ENSG00000122033|ENST00000381120|MTIF3	61.691277971877994	0.19951612995419254	2				NaN	NaN	0	NaN	1685	2513	4193
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4212	15.919	NaN	3828.2	30	0	603.97	0.214	+			40962	SVGAKQKKWK	10	46	387.235101953642	NaN	0	387.2351379394531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVGAKQKKWK_	ENSG00000158292|ENST00000377893|GPR153;GPR153|p.P336Rfs*20|1|0.28|ENSG00000158292|chr1:6250597-6250597|G/-|frameshift_variant	35.15202426646627	0.38475398474706135	2				NaN	NaN	0	NaN	1694	2516	4211
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4213	15.922	NaN	2328.1	30	0	321.63	0.106	+			1586	AGKNLGTTKK	10	59	509.30593383286333	1016.5973147325267	2	509.3065490722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AGKNLGTTKK_	ENSG00000035687|ENST00000366535|ADSS2	51.19269402634007	0.44601001148513897	2				NaN	NaN	0	NaN	1695	2516	4211
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4214	15.924	NaN	5488.3	30	0	948.53	0.106				-1	LSNILMHSHK	10	59	399.2121049805236	1194.6144855417708	3	398.8912658691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_LSNILM(Oxidation (M))HSHK_	ENST00000522658.5_1_8:101717867-101718943:-|nuORF	47.227680397652996	0.4825456260682108	2				NaN	NaN	0	NaN	1696	2516	4211
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4215	15.926	NaN	3140.6	30	0	536.1	0.106	+			32656	RAAKPLQVNK	10	74	562.8484437893231	1123.6823346454462	2	562.8494262695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RAAKPLQVNK_	ENSG00000105053|ENST00000316763|VRK3;ENST00000594090.5_1_19:50491627-50519408:-|nuORF;nc|ENSG00000105053|Q8IV63-2|VRK3;nc|ENSG00000105053|Q8IV63-3|VRK3	45.97224482568171	0.49411383603842696	2				NaN	NaN	0	NaN	1697	2516	4211
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4216	15.928	NaN	2411.1	30	0	400.58	0.106	+			15189	GTSNTTAIK	9	51	446.7399322853111	891.4653116374222	2	446.7402648925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTSNTTAIK_	ENSG00000117222|ENST00000264515|RBBP5;nc|ENSG00000117222|Q15291-2|RBBP5;RBBP5|p.P419Hfs*9|2|0.3|ENSG00000117222|chr1:205096822-205096822|G/-|frameshift_variant	37.81151784470057	0.4459294069877048	2				NaN	NaN	0	NaN	1698	2516	4211
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4217	15.93	NaN	6051	30	0	1006.7	0.034				-1	 	0	64	459.22832483288727	916.4420967325746	2	459.2290954589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1699	2516	4211
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4218	15.93	NaN	1039.2	30	0	253.11	0.144			+	8659	EDSDREEKIY	10	24	642.2902700832616	NaN	0	642.290283203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EDSDREEKIY_	REV__ENSG00000188738|ENST00000424728|FSIP2	23.52269567125451	0.42010282974921537	2				NaN	NaN	0	NaN	1700	2516	4211
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4230	15.959	NaN	32398	30	0	8411.2	0.214				-1	 	0	74	492.7583819988262	983.5022110644525	2	492.7587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1709	2519	4229
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4231	15.962	NaN	31567	30	0	10692	0.106	+			39788	STKYRTLRQ	9	64	384.8872703625191	1151.6399816877572	3	384.8875732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STKYRTLRQ_	ENSG00000151892|ENST00000355422|GFRA1;GFRA1|p.F264Lfs*15|1|0.28|ENSG00000151892|chr10:116096743-116096743|A/-|frameshift_variant;GFRA1|p.L403Pfs*27|1|0.16|ENSG00000151892|chr10:116065610-116065616|GATTTCA/-|frameshift_variant;GFRA1|p.P177Rfs*68|1|0.28|ENSG00000151892|chr10:116125461-116125461|G/-|frameshift_variant;nc|ENSG00000151892|P56159-2|GFRA1	56.43379154798735	0.2433427591689151	2				NaN	NaN	0	NaN	1710	2519	4229
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4232	15.964	NaN	8674.5	30	0	3017.5	0.106	+			28361	NEKSDTHTL	9	60	522.7508768871498	1043.4872008410996	2	522.751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NEKSDTHTL_	ENSG00000116237|ENST00000343813|ICMT	138.06239232086	0.011389075116295402	2				NaN	NaN	0	NaN	1711	2519	4229
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4233	15.966	NaN	4146.7	30	0	1745.2	0.106				-1	 	0	60	413.22635123355514	824.4381495339103	2	413.22686767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1712	2519	4229
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4234	15.968	NaN	2431	30	0	392.96	0.106			+	5044	ATSGILGAAS	10	60	424.22905559293514	846.4435582526703	2	424.22955322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATSGILGAAS_	REV__ENST00000287652.8_1_3:10321371-10321626:+|nuORF	45.97224482568171	0.49411383603842696	2				NaN	NaN	0	NaN	1713	2519	4229
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4235	15.97	NaN	1552.8	30	0	211.76	0.036	+			31343	QISSPQENR	9	55	529.7640542143762	1057.5135554955523	2	529.765380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QISSPQENR_	ENSG00000165181|ENST00000682961|SHOC1;nc|ENSG00000165181|Q5VXU9-3|SHOC1;nc|ENSG00000165181|Q5VXU9|SHOC1	34.172542307311794	0.4838870758800184	2				NaN	NaN	0	NaN	1714	2519	4229
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4236	15.97	NaN	138010	30	0	26035	0.139	+			6330	AVTKYTSAK	9	111	484.774004037536	967.533455141872	2	484.7737121582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AVTKYTSAK_	ENSG00000124635|ENST00000339812|H2BC11;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000234289|ENST00000599962|H2BC12L	182.3913890336628	0.0010559746847940753	2				NaN	NaN	0	NaN	1715	2519	4229
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4249	16.001	NaN	33769	30	0	13198	0.208	+			40704	SVCEGKGLHR	10	67	381.5287898743789	1141.5645402233367	3	381.52923583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SVC(Carbamidomethyl (C))EGKGLHR_	ENSG00000161011|ENST00000389805|SQSTM1;ENST00000466342.1_1_5:179250916-179260288:+|nuORF;nc|ENSG00000161011|Q13501-2|SQSTM1	61.76455937419982	0.3497917639301274	2				NaN	NaN	0	NaN	1725	2522	4248
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4250	16.004	NaN	4535.6	30	0	874.95	0.106				-1	SYIHQVCKGI	10	57	402.21000973213233	1203.608199796597	3	402.2102966308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SYIHQVC(Carbamidomethyl (C))KGI_	ARMCX5|p.N462Ifs*8|1|0.68|ENSG00000125962|chrX:102603522-102603522|A/-|frameshift_variant;ENSG00000125962|ENST00000473968|ARMCX5	28.081489160057373	0.6505064946289502	2				NaN	NaN	0	NaN	1726	2522	4248
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4251	16.006	NaN	4150.9	30	0	634.52	0.106	+			25911	LSGMQISGAVA	11	66	517.270997334469	NaN	0	517.2711791992188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSGMQISGAVA_	ENSG00000176986|ENST00000345254|SEC24C;SEC24C|p.P216Qfs*11|1|0.45|ENSG00000176986|chr10:73760179-73760179|C/-|frameshift_variant	63.53385203322761	0.1989067641070983	2				NaN	NaN	0	NaN	1727	2522	4248
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4252	16.008	NaN	27304	30	0	2447.8	0.106				-1	 	0	78	456.58017460413305	1366.7186944125992	3	456.5804138183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1728	2522	4248
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4253	16.01	NaN	2917.1	30	0	527.3	0.106	+			16293	HEHGQLHSM	9	64	538.2397280493293	1074.4649031654585	2	538.240966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HEHGQLHSM_	ENSG00000196504|ENST00000545856|PRPF40A;nc|ENSG00000196504|O75400-2|PRPF40A;nc|ENSG00000196504|O75400-3|PRPF40A;nc|ENSG00000196504|O75400|PRPF40A	65.46538089061403	0.16805504838372562	2				NaN	NaN	0	NaN	1729	2522	4248
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4254	16.011	NaN	2818.4	30	0	825.8	0.036	+			39695	STIKSIEKK	9	43	345.21319525575916	NaN	0	345.2131652832031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STIKSIEKK_	ENSG00000068097|ENST00000184956|HEATR6	43.650786325866115	0.2504488100985368	2				NaN	NaN	0	NaN	1730	2522	4248
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4255	16.012	NaN	22328	30	0	5960.7	0.144	+			36968	SIMEKKMKTK	10	74	408.5657773049004	1222.6755025149012	3	408.5662841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SIMEKKMKTK_	ENSG00000115267|ENST00000649979|IFIH1	70.39856735676683	0.27406383984062843	2				NaN	NaN	0	NaN	1731	2522	4248
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4269	16.043	NaN	43654	30	0	7488.7	0.179				-1	 	0	81	486.7947376556947	971.5749223781894	2	486.7950134277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1742	2525	4268
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4270	16.046	NaN	5158.8	30	0	1479.2	0.106	+			44936	TVAPTTANK	9	61	451.75015042137284	901.4857479095457	2	451.75054931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVAPTTANK_	ENSG00000116260|ENST00000367602|QSOX1;nc|ENSG00000116260|O00391-2|QSOX1;QSOX1|p.S469Vfs*117|1|0.35|ENSG00000116260|chr1:180194325-180194325|G/-|frameshift_variant	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	1743	2525	4268
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4271	16.048	NaN	2079.6	30	0	329.15	0.106	+			41424	SVNGHQKAL	9	52	477.26202449245795	952.5094960517159	2	477.2616882324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVNGHQKAL_	ENSG00000105983|ENST00000353442|LMBR1;nc|ENSG00000105983|Q8WVP7-2|LMBR1;nc|ENSG00000105983|Q8WVP7-3|LMBR1	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	1744	2525	4268
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4272	16.05	NaN	931.04	30	0	117.45	0.106	+			17161	HTHPKEAATD	10	48	553.7657413995796	1105.5169298659591	2	553.7672729492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HTHPKEAATD_	ENSG00000070729|ENST00000251102|CNGB1;nc|ENSG00000070729|Q14028-2|CNGB1;nc|ENSG00000070729|Q14028-4|CNGB1	22.579656572578934	0.6954366826851017	2				NaN	NaN	0	NaN	1745	2525	4268
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4273	16.052	NaN	3145	30	0	1467.2	0.106			+	-1	AAIMKKAKE	9	34	335.86328243993427	1004.5680179200028	3	335.8636169433594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_AAIM(Oxidation (M))KKAKE_	REV__ENSG00000183150|ENST00000651487|GPR19	34.172542307311794	0.4838870758800184	2				NaN	NaN	0	NaN	1746	2525	4268
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4274	16.054	NaN	8796.9	30	0	2215.1	0.106	+			27853	MTGSSAPCK	9	58	441.1956296519276	880.3767063706553	2	441.19598388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MTGSSAPCK_	ENST00000392001.6_1_2:238499129-238499162:-|nuORF	93.1432384553994	0.056003526918089595	2				NaN	NaN	0	NaN	1747	2525	4268
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4275	16.056	NaN	857.2	30	0	54.285	0.036			+	22349	KTGQSPTQII	10	46	536.8031470771641	1071.5917412211281	2	536.8037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KTGQSPTQII_	REV__ADAM9|p.R596Q|1|0.42|ENSG00000168615|chr8:39077317-39077317|G/A|missense_variant	39.873155843976775	0.5503138860789152	2				NaN	NaN	0	NaN	1748	2525	4268
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4291	16.089	NaN	8681.1	30	0	1352.8	0.214	+			16057	HAYEHSLGK	9	76	521.2586787563072	1040.5028045794143	2	521.2594604492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HAYEHSLGK_	ENSG00000105355|ENST00000221957|PLIN3;nc|ENSG00000105355|O60664-2|PLIN3;nc|ENSG00000105355|O60664-3|PLIN3;nc|ENSG00000105355|O60664-4|PLIN3	136.26810882979174	0.012230845423532208	2				NaN	NaN	0	NaN	1761	2528	4290
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4292	16.093	NaN	43889	30	0	27839	0.106			+	48073	VSSSDIGRAK	10	51	340.5205459334635	1018.5398084005906	3	340.5209045410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSSSDIGRAK_	REV__ENSG00000166483|ENST00000450114|WEE1;REV__ENST00000524549.1_1_11:9597437-9598815:+|nuORF	27.882242232435846	0.6521336255503853	2				NaN	NaN	0	NaN	1762	2528	4290
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4293	16.095	NaN	13300	30	0	4612.7	0.106	+			16058	HAYEHSLGK	9	73	347.8416108706209	1040.5030032120628	3	347.84197998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HAYEHSLGK_	ENSG00000105355|ENST00000221957|PLIN3;nc|ENSG00000105355|O60664-2|PLIN3;nc|ENSG00000105355|O60664-3|PLIN3;nc|ENSG00000105355|O60664-4|PLIN3	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	1763	2528	4290
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4294	16.096	NaN	2207.3	30	0	714.05	0.106	+			21815	KRDVTEAIQ	9	60	530.2925710547374	1058.5705891762748	2	530.2937622070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KRDVTEAIQ_	ENSG00000163554|ENST00000643759|SPTA1;nc|ENSG00000163554|P02549-2|SPTA1;SPTA1|p.D609Vfs*11|1|0.27|ENSG00000163554|chr1:158669415-158669416|-/CTTCATCA|frameshift_variant;SPTA1|p.N501Tfs*33|1|0.11|ENSG00000163554|chr1:158671440-158671440|T/-|frameshift_variant	33.921630207806714	0.48623198279849766	2				NaN	NaN	0	NaN	1764	2528	4290
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4295	16.098	NaN	2575.8	30	0	406	0.106	+			45119	TVKDFSHAK	9	55	344.85351368529473	1031.5387116560842	3	344.85394287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TVKDFSHAK_	ENSG00000164941|ENST00000523731|INTS8;ENST00000523206.5_1_8:95850795-95884149:+|nuORF;ENST00000523321.5_1_8:95835614-95871872:+|nuORF;nc|ENSG00000164941|Q75QN2-2|INTS8	36.446750945000026	0.4619375763483977	2				NaN	NaN	0	NaN	1765	2528	4290
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4296	16.1	NaN	4801.2	30	0	482.74	0.033				-1	 	0	62	417.2268601543386	832.4391673754773	2	417.2271728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1766	2528	4290
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4297	16.101	NaN	3117.3	30	0	436.94	0.14	+			5097	ATSPAGTAQAR	11	49	515.7672914676273	1029.5200300020545	2	515.7674560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATSPAGTAQAR_	ENSG00000142798|ENST00000374695|HSPG2;HSPG2|p.C2696Sfs*49|1|0.18|ENSG00000142798|chr1:21847425-21847431|GCCCGGC/-|frameshift_variant;HSPG2|p.G2190Afs*19|1|0.38|ENSG00000142798|chr1:21852941-21852941|C/-|frameshift_variant;HSPG2|p.P3071Hfs*100|1|0.06|ENSG00000142798|chr1:21841639-21841655|GATGATGGAGCCATTGG/-|frameshift_variant;HSPG2|p.P3112Lfs*13|1|0.47|ENSG00000142798|chr1:21841279-21841279|G/-|frameshift_variant	43.650786325866115	0.5079891456189096	2				NaN	NaN	0	NaN	1767	2528	4290
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4309	16.128	NaN	28638	30	0	5257.2	0.214	+			42542	TARREDESY	9	93	563.7592448322899	1125.5039367313798	2	563.7601928710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TARREDESY_	ENSG00000171824|ENST00000376936|EXOSC10;ENST00000485606.1_1_1:11140819-11141291:-|nuORF;nc|ENSG00000171824|Q01780-2|EXOSC10	29.170058357718403	0.5306379469863586	2				NaN	NaN	0	NaN	1776	2531	4308
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4310	16.132	NaN	25595	30	0	2472.4	0.106	+			21410	KMRQMWNNK	9	99	626.307929623849	1250.6013063144978	2	626.3074951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_KMRQM(Oxidation (M))WNNK_	ADAMTSL3|p.F1172Yfs*20|1|0.12|ENSG00000156218|chr15:83983142-83983143|-/A|frameshift_variant;ADAMTSL3|p.H1300Ifs*18|1|0.33|ENSG00000156218|chr15:83991138-83991138|C/-|frameshift_variant;ADAMTSL3|p.N1166Kfs*26|1|0.4|ENSG00000156218|chr15:83983119-83983120|-/A|frameshift_variant;ADAMTSL3|p.R1207Gfs*32|1|0.3|ENSG00000156218|chr15:83983243-83983243|A/-|frameshift_variant;ENSG00000156218|ENST00000286744|ADAMTSL3;ENST00000561483.5_1_15:84323016-84694242:+|nuORF;nc|ENSG00000156218|P82987-2|ADAMTSL3	94.00642277110589	0.05356993013874309	2				NaN	NaN	0	NaN	1777	2531	4308
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4311	16.134	NaN	21068	30	0	3518.5	0.106	+			6555	AYKKTHETL	9	61	364.2008876582747	1089.5808335750241	3	364.20111083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AYKKTHETL_	ENSG00000111907|ENST00000534000|TPD52L1;ENST00000392483.6_1_6:125475019-125569560:+|nuORF;ENST00000532978.5_1_6:125475518-125573183:+|nuORF;nc|ENSG00000111907|Q16890-2|TPD52L1;nc|ENSG00000111907|Q16890-3|TPD52L1;nc|ENSG00000111907|Q16890-4|TPD52L1;nc|ENSG00000111907|Q16890-5|TPD52L1	31.954861631926434	0.5046124803899898	2				NaN	NaN	0	NaN	1778	2531	4308
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4312	16.136	NaN	6611.7	30	0	1436.7	0.106			+	3807	ATAGLLQQ	8	54	401.22637467729834	800.4381964213967	2	401.226806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATAGLLQQ_	REV__ATP8B3|p.T1172Rfs*12|1|0.27|ENSG00000130270|chr19:1785178-1785178|G/-|frameshift_variant;REV__ENSG00000130270|ENST00000310127|ATP8B3	87.75429964447693	0.2842685068779738	2				NaN	NaN	0	NaN	1779	2531	4308
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4313	16.137	NaN	7721.8	30	0	1927.6	0.106			+	11695	FRPKKMPLI	9	49	377.2357830980061	1128.6855198942183	3	377.2359924316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FRPKKMPLI_	REV__ENST00000590607.1_1_19:29704218-29706237:+|nuORF	37.15910966729921	0.4535818937225704	2				NaN	NaN	0	NaN	1780	2531	4308
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4314	16.139	NaN	3436.5	30	0	997.01	0.035				-1	KMQKQKLQ	8	61	524.301256069955	1046.58795920671	2	524.3024291992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_KM(Oxidation (M))QKQKLQ_	ENSG00000183495|ENST00000389561|EP400;EP400|p.P2793Rfs*46|1|0.3|ENSG00000183495|chr12:132064707-132064707|C/-|frameshift_variant;nc|ENSG00000183495|Q96L91-3|EP400;nc|ENSG00000183495|Q96L91-4|EP400;nc|ENSG00000183495|Q96L91-5|EP400;nc|ENSG00000183495|Q96L91|EP400	79.9392285194092	0.32408006123154964	2				NaN	NaN	0	NaN	1781	2531	4308
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4315	16.14	NaN	5418.3	30	0	3170.5	0.142	+			43705	TKLQSMNSEN	10	45	576.2702724261769	1150.5259919191537	2	576.271240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TKLQSMNSEN_	ENSG00000128513|ENST00000357628|POT1;nc|ENSG00000128513|Q9NUX5-2|POT1;POT1|p.D617Hfs*20|1|0.02|ENSG00000128513|chr7:124824019-124824020|-/TAGCATGG|frameshift_variant	31.529811441608018	0.6223461015008678	2				NaN	NaN	0	NaN	1782	2531	4308
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4330	16.173	NaN	39394	30	0	8377.8	0.214	+			45339	TVSKILHHK	9	83	354.88507861868436	1061.6334064562532	3	354.8854675292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVSKILHHK_	CFTR|p.E1044Dfs*20|1|0.04|ENSG00000001626|chr7:117610661-117610662|-/TCAAAGAAAAC|frameshift_variant;CFTR|p.G1208Afs*3|1|0.3|ENSG00000001626|chr7:117627672-117627672|G/-|frameshift_variant;CFTR|p.L1258Ffs*7|1|0.26|ENSG00000001626|chr7:117642487-117642488|-/T|frameshift_variant;CFTR|p.S1297Lfs*31|1|0.28|ENSG00000001626|chr7:117652852-117652852|T/-|frameshift_variant;ENSG00000001626|ENST00000003084|CFTR;nc|ENSG00000001626|P13569-2|CFTR	39.252832667884924	0.4290233611298554	2				NaN	NaN	0	NaN	1794	2534	4329
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4331	16.177	NaN	4541.4	30	0	790.39	0.106			+	41660	SVRECQRI	8	59	495.76328148991263	989.5120100466253	2	495.763916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVRECQRI_	REV__ENST00000392064.6_2_1:174926618-174938447:+|nuORF;REV__ENST00000486220.5_1_1:174926618-174927046:+|nuORF	67.49366992349736	0.4277823096851425	2				NaN	NaN	0	NaN	1795	2534	4329
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4332	16.179	NaN	101500	30	0	28299	0.106				-1	 	0	108	438.9411736506498	1313.8016915521494	3	438.9415283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1796	2534	4329
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4333	16.181	NaN	1675.3	30	0	411.99	0.106	+			4988	ATRSLEIVL	9	37	334.53753250290447	1000.5907681089134	3	334.53778076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATRSLEIVL_	ENSG00000188162|ENST00000399397|OTOG;nc|ENSG00000188162|Q6ZRI0-2|OTOG;nc|ENSG00000188162|Q6ZRI0|OTOG	20.94693142431847	0.6074874384046576	2				NaN	NaN	0	NaN	1797	2534	4329
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4334	16.182	NaN	3299.6	30	0	1152.4	0.106	+			34245	RTGPPMGSR	9	64	479.7474080442618	957.4802631553237	2	479.7479553222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RTGPPMGSR_	ENSG00000106682|ENST00000265753|EIF4H;nc|ENSG00000106682|Q15056-2|EIF4H	58.2462437865262	0.22823408064396822	2				NaN	NaN	0	NaN	1798	2534	4329
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4335	16.184	NaN	38002	30	0	6377	0.038	+			34182	RTCWETTKK	9	118	403.87234009701785	1208.5951908912537	3	403.87298583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_RTC(Carbamidomethyl (C))WETTKK_	ENST00000504956.5_1_4:87869676-87967907:+|nuORF;ENST00000511442.1_2_4:87869713-87967910:+|nuORF	115.23196543181992	0.024086211614104236	2				NaN	NaN	0	NaN	1799	2534	4329
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4336	16.185	NaN	917.59	30	0	244.97	0.143			+	-1	STQLSSVPLML	11	32	397.8820144728768	1190.6242140188303	3	397.88238525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_STQLSSVPLM(Oxidation (M))L_	REV__ENST00000492153.1_1_1:161183142-161183728:+|nuORF	17.833141474888023	0.7869876583333034	2				NaN	NaN	0	NaN	1800	2534	4329
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4351	16.218	NaN	3096.8	30	0	508.63	0.213	+			34183	RTCWETTKK	9	57	605.3054474011035	1208.596341869007	2	605.3057861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_RTC(Carbamidomethyl (C))WETTKK_	ENST00000504956.5_1_4:87869676-87967907:+|nuORF;ENST00000511442.1_2_4:87869713-87967910:+|nuORF	75.04331003522576	0.118981335847003	2				NaN	NaN	0	NaN	1812	2537	4350
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4352	16.222	NaN	17445	30	0	3291.5	0.106			+	4039	ATDDVLADALT	11	73	368.8522418582464	1103.5348961749391	3	368.8524475097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATDDVLADALT_	REV__tr|U7SKJ2|U7SKJ2_FUSNUTraTcomplementresistanceproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02049PE=4SV=1	39.252832667884924	0.5681665794958463	2				NaN	NaN	0	NaN	1813	2537	4350
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4353	16.224	NaN	5063	30	0	620.98	0.106			+	21020	KKINNEQK	8	65	501.2905236198386	1000.5664943064772	2	501.29022216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KKINNEQK_	REV__tr|U7SSZ1|U7SSZ1_FUSNUUncharacterizedprotein(Fragment)OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01554PE=4SV=1	71.87747018426188	0.391254423828572	2				NaN	NaN	0	NaN	1814	2537	4350
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4354	16.226	NaN	7670.3	30	0	1295.2	0.106			+	-1	QCSPMVMKMNL	11	78	457.53502550100825	1369.5832471032247	3	457.5353698730469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),2 Oxidation (M)	_QC(Carbamidomethyl (C))SPM(Oxidation (M))VM(Oxidation (M))KMNL_	REV__ENST00000495365.5_1_1:24119163-24120565:+|nuORF	36.527901853580055	0.6054519527965578	2				NaN	NaN	0	NaN	1815	2537	4350
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4355	16.228	NaN	3746.3	30	0	603.95	0.106				-1	 	0	41	428.21904064316107	854.4235283531222	2	428.21929931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1816	2537	4350
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4356	16.229	NaN	1861.4	30	0	340.73	0.039	+			9965	ERERRAASRGA	11	43	420.2295227050781	NaN	0	420.2295227050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ERERRAASRGA_	ENST00000290881.11_1_16:67217371-67217884:-|nuORF	25.891714612410027	0.45002760985531187	2				NaN	NaN	0	NaN	1817	2537	4350
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4357	16.23	NaN	1591.2	30	0	224.74	0.14	+			6492	AWCTINTRA	9	62	518.25717636734	NaN	0	518.2571411132812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AWCTINTRA_	SETD4|p.V204I|1|0.39|ENSG00000185917|chr21:36045698-36045698|C/T|missense_variant	30.503639358989545	0.3235605894931338	2				NaN	NaN	0	NaN	1818	2537	4350
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4368	16.257	NaN	10161	30	0	2821.7	0.214	+			29199	NVNEPATTK	9	67	487.24940101026755	972.4842490873351	2	487.250732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NVNEPATTK_	ENSG00000116906|ENST00000366647|GNPAT;nc|ENSG00000116906|O15228-2|GNPAT	66.96192283764107	0.15557981141143568	2				NaN	NaN	0	NaN	1826	2540	4367
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4369	16.261	NaN	11174	30	0	6623.6	0.106	+			34589	RVMKALVNR	9	69	551.8286849136024	1101.6428168940047	2	551.8296508789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_RVM(Oxidation (M))KALVNR_	ENSG00000149136|ENST00000278412|SSRP1;ENST00000293880.9_1_11:57098199-57100416:-|nuORF	58.78195531508484	0.22376836668196862	2				NaN	NaN	0	NaN	1827	2540	4367
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4370	16.263	NaN	20294	30	0	5169	0.106	+			34590	RVMKALVNR	9	74	368.221766979996	1101.643471540188	3	368.22186279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_RVM(Oxidation (M))KALVNR_	ENSG00000149136|ENST00000278412|SSRP1;ENST00000293880.9_1_11:57098199-57100416:-|nuORF	45.02220120713402	0.3613509778819777	2				NaN	NaN	0	NaN	1828	2540	4367
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4371	16.265	NaN	6917.4	30	0	2324.1	0.106			+	-1	MLIICRVK	8	70	496.29258157309687	990.5706102129938	2	496.2927551269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_M(Oxidation (M))LIICRVK_	REV__L1PB1_dup5905|chr7:93807211-93809400:+|2.023350116566841|0.2056128638309657|3.3|382.0|126|3|anti-sense	60.29395666154354	0.49887135096048313	2				NaN	NaN	0	NaN	1829	2540	4367
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4372	16.266	NaN	9681.1	30	0	2102.3	0.106			+	41714	SVSEAAKPKK	10	70	522.8054892127817	1043.5964254923633	2	522.8069458007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVSEAAKPKK_	REV__ENSG00000022277|ENST00000357348|RTF2;REV__ENST00000477485.1_1_20:55088448-55092101:+|nuORF	90.36981228632155	0.12895663264417576	2				NaN	NaN	0	NaN	1830	2540	4367
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4373	16.268	NaN	5752.9	30	0	1200.2	0.034	+			41708	SVSDPGQAR	9	48	458.7274818167376	NaN	0	458.72747802734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVSDPGQAR_	nc|ENSG00000157800|Q8NCC5-3|SLC37A3	58.22992032128504	0.15686832049467786	2				NaN	NaN	0	NaN	1831	2540	4367
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4374	16.269	NaN	1265.9	30	0	134.4	0.141			+	-1	ISSANLDPMK	10	56	546.275497367956	1090.5364418027118	2	546.7772827148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_ISSANLDPM(Oxidation (M))K_	REV__tr|U7T0U6|U7T0U6_FUSNULargeribosomalsubunitproteinuL11OS=FusobacteriumnucleatumCTI-5OX=1316586GN=rplKPE=3SV=1	23.52269567125451	0.6877354443478558	2				NaN	NaN	0	NaN	1832	2540	4367
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4386	16.296	NaN	177430	30	0	64788	0.214				-1	 	0	88	418.228903900745	834.4432548682901	2	418.2294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1841	2543	4385
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4387	16.3	NaN	4793.2	30	0	1164	0.106	+			22399	KTISQAVNK	9	63	494.7923703256259	987.5701877180518	2	494.7926025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTISQAVNK_	ENSG00000061676|ENST00000361354|NCKAP1;ENST00000495619.1_1_2:183822183-183829436:-|nuORF;nc|ENSG00000061676|Q9Y2A7-2|NCKAP1;NCKAP1|p.M725Kfs*19|1|0.04|ENSG00000061676|chr2:182953311-182953312|-/AGAGTATT|frameshift_variant	122.93914200107957	0.019420478173996256	2				NaN	NaN	0	NaN	1842	2543	4385
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4388	16.302	NaN	3081.5	30	0	570.98	0.106	+			9208	EGRSSRGSL	9	62	474.7487580513179	NaN	0	474.753173828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EGRSSRGSL_	ENST00000504307.1_2_17:48249464-48258440:-|nuORF	49.536043120802724	0.20989033510253738	2				NaN	NaN	0	NaN	1843	2543	4385
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4389	16.304	NaN	4230.3	30	0	1419.8	0.106				-1	 	0	64	519.2842675486932	518.2769910820931	1	519.2850341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1844	2543	4385
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4390	16.305	NaN	3963.5	30	0	1003.1	0.106	+			49381	VVSVQSVQ	8	50	423.23946321147065	844.4643734897413	2	423.2398986816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVSVQSVQ_	ENSG00000181722|ENST00000675478|ZBTB20;nc|ENSG00000181722|Q9HC78-2|ZBTB20;ZBTB20|p.P692Cfs*33|1|0.42|ENSG00000181722|chr3:114339156-114339157|GG/-|frameshift_variant;ZBTB20|p.P692Lfs*43|20|0.32|ENSG00000181722|chr3:114339156-114339156|G/-|frameshift_variant	44.116797842482775	0.6307669463330267	2				NaN	NaN	0	NaN	1845	2543	4385
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4391	16.307	NaN	1566.7	30	0	193.71	0.106				-1	SVGCGTTPGK	10	59	482.23136549263353	962.4481780520671	2	482.2313537597656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_SVGC(Carbamidomethyl (C))GTTPGK_	ENST00000341189.8_1_X:100878151-100879155:+|nuORF;ENST00000477980.6_1_X:100878681-100879155:+|nuORF;ENST00000491568.6_1_X:100878383-100879155:+|nuORF	47.95952297671804	0.47580206326914537	2				NaN	NaN	0	NaN	1846	2543	4385
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4392	16.309	NaN	2797.8	30	0	973.14	0.036	+			35352	SAPHSSSTSHL	11	48	555.7615330596399	1109.5085131860797	2	555.7623291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SAPHSSSTSHL_	BAZ2A|p.K1507Qfs*26|1|0.27|ENSG00000076108|chr12:56600770-56600771|-/G|frameshift_variant;BAZ2A|p.Q120Tfs*20|1|0.34|ENSG00000076108|chr12:56615393-56615394|-/C|frameshift_variant;BAZ2A|p.V259Dfs*14|1|0.23|ENSG00000076108|chr12:56614090-56614099|AACGATTCCA/-|frameshift_variant;BAZ2A|p.V772Sfs*9|1|0.34|ENSG00000076108|chr12:56606016-56606016|T/-|frameshift_variant;ENSG00000076108|ENST00000549884|BAZ2A;nc|ENSG00000076108|Q9UIF9-2|BAZ2A;nc|ENSG00000076108|Q9UIF9-3|BAZ2A;nc|ENSG00000076108|Q9UIF9|BAZ2A	45.97224482568171	0.4762245054624163	2				NaN	NaN	0	NaN	1847	2543	4385
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4409	16.343	NaN	55696	30	0	19067	0.19	+			48870	VVDAKTLKK	9	72	334.5496517551006	1000.627125865502	3	334.5498962402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVDAKTLKK_	ENSG00000079246|ENST00000392132|XRCC5;ENST00000493706.1_1_2:216990646-216992426:+|nuORF;XRCC5|p.E287Kfs*11|2|0.25|ENSG00000079246|chr2:216127589-216127589|A/-|frameshift_variant;XRCC5|p.Q488Rfs*29|1|0.06|ENSG00000079246|chr2:216141305-216141305|C/-|frameshift_variant	65.46538089061403	0.16805504838372562	2				NaN	NaN	0	NaN	1861	2546	4408
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4410	16.347	NaN	29083	30	0	4046.4	0.106				-1	 	0	87	508.2670381131866	1014.5195232931732	2	508.2675476074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1862	2546	4408
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4411	16.349	NaN	56300	30	0	14422	0.106	+			22947	KVQSKVNLK	9	94	522.331573984261	1042.648595035322	2	522.3323974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KVQSKVNLK_	DYNC1H1|p.F2635Lfs*67|1|0.16|ENSG00000197102|chr14:102017141-102017141|T/-|frameshift_variant;DYNC1H1|p.G1902Vfs*27|2|0.27|ENSG00000197102|chr14:102006154-102006154|G/-|frameshift_variant;DYNC1H1|p.K3112Hfs*3|1|0.31|ENSG00000197102|chr14:102027998-102027999|-/TCACAAG|frameshift_variant;DYNC1H1|p.W4201Gfs*43|1|0.42|ENSG00000197102|chr14:102043958-102043958|G/-|frameshift_variant;ENSG00000197102|ENST00000360184|DYNC1H1	164.45504665044191	0.003713414289755139	2				NaN	NaN	0	NaN	1863	2546	4408
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4412	16.35	NaN	2332.5	30	0	271.89	0.106	+			40631	SVAPATGSK	9	54	409.22413245309446	816.4337119729889	2	409.2244873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVAPATGSK_	ENSG00000188549|ENST00000397536|CCDC9B;ENST00000382688.8_1_15:40627361-40631125:-|nuORF;ENST00000558912.1_1_15:40628773-40628908:-|nuORF;nc|ENSG00000188549|Q6ZUT6-2|CCDC9B;nc|ENSG00000188549|Q6ZUT6-4|CCDC9B;nc|ENSG00000188549|Q6ZUT6|CCDC9B	31.529811441608018	0.5085848003137583	2				NaN	NaN	0	NaN	1864	2546	4408
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4413	16.352	NaN	3654.8	30	0	378.18	0.106	+			34645	RVQEENARLK	10	56	414.90193196239346	NaN	0	414.9019775390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RVQEENARLK_	ENSG00000154305|ENST00000344922|MIA3;MIA3|p.P1645Yfs*19|1|0.06|ENSG00000154305|chr1:222659963-222659964|-/TATAG|frameshift_variant;nc|ENSG00000154305|Q5JRA6-4|MIA3	72.09557110113691	0.1383596426166609	2				NaN	NaN	0	NaN	1865	2546	4408
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4414	16.354	NaN	1912	30	0	362.41	0.106			+	19527	KAVPRPLTA	9	65	476.8001092617645	951.585665590329	2	476.8001708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KAVPRPLTA_	REV__ADAMTS9|p.S1884Ffs*2|1|0.35|ENSG00000163638|chr3:64533233-64533233|G/-|frameshift_variant;REV__ENSG00000163638|ENST00000498707|ADAMTS9;REV__ENST00000482490.5_1_3:64536549-64672246:-|nuORF;REV__nc|ENSG00000163638|Q9P2N4-1|ADAMTS9;REV__nc|ENSG00000163638|Q9P2N4-4|ADAMTS9	55.50420428727701	0.2510918378945873	2				NaN	NaN	0	NaN	1866	2546	4408
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4415	16.356	NaN	61259	30	0	20100	0.038				-1	 	0	68	391.52754690775896	1171.5608113234769	3	391.5277099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1867	2546	4408
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4429	16.386	NaN	137090	30	0	22863	0.124	+			44985	TVDEKNYTK	9	85	549.2761756274878	1096.5377983217754	2	549.2769775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVDEKNYTK_	ENSG00000182551|ENST00000327435|ADI1;nc|ENSG00000182551|Q9BV57-2|ADI1	169.6522961985778	0.0028262690464207238	2				NaN	NaN	0	NaN	1878	2549	4428
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4430	16.389	NaN	98969	30	0	44727	0.106	+			19841	KEEELVELLAR	11	93	443.58543916693753	1327.7344881010126	3	443.58575439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEEELVELLAR_	ENSG00000169994|ENST00000409816|MYO7B;ENST00000496841.5_1_2:128377972-128392002:+|nuORF;nc|ENSG00000169994|Q6PIF6-2|MYO7B;nc|ENSG00000169994|Q6PIF6|MYO7B	20.030474535948922	0.7766990143561855	2				NaN	NaN	0	NaN	1879	2549	4428
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4431	16.391	NaN	6846.7	30	0	902.6	0.106	+			34560	RVLESVQKK	9	68	362.8924585080083	NaN	0	362.8924865722656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RVLESVQKK_	ENSG00000127511|ENST00000248054|SIN3B;nc|ENSG00000127511|O75182|SIN3B;SIN3B|p.F776Lfs*21|1|0.31|ENSG00000127511|chr19:16869880-16869880|T/-|frameshift_variant;SIN3B|p.P742Qfs*55|1|0.37|ENSG00000127511|chr19:16869777-16869777|C/-|frameshift_variant	145.15565482312357	0.0012548246736834398	2				NaN	NaN	0	NaN	1880	2549	4428
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4432	16.392	NaN	7108.1	30	0	675.19	0.106	+			34481	RVDDAVAAK	9	65	472.76140828074494	NaN	0	472.7613525390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RVDDAVAAK_	ENSG00000244187|ENST00000290079|TMEM141;ENST00000465017.5_1_9:139685822-139687379:+|nuORF	89.02883481214508	0.043554178677197526	2				NaN	NaN	0	NaN	1881	2549	4428
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4433	16.394	NaN	51793	30	0	27508	0.106			+	45838	VAKQHAAEEP	10	55	360.5205939037019	1078.5399523113058	3	360.5208740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VAKQHAAEEP_	REV__ENSG00000135100|ENST00000257555|HNF1A;REV__HNF1A|p.H500Tfs*31|1|0.15|ENSG00000135100|chr12:120997658-120997658|C/-|frameshift_variant;REV__HNF1A|p.P291Qfs*51|4|0.47|ENSG00000135100|chr12:120994312-120994312|G/-|frameshift_variant;REV__HNF1A|p.P379Lfs*5|3|0.42|ENSG00000135100|chr12:120996564-120996564|C/-|frameshift_variant;REV__nc|ENSG00000135100|P20823-2|HNF1A;REV__nc|ENSG00000135100|P20823-3|HNF1A;REV__nc|ENSG00000135100|P20823-4|HNF1A;REV__nc|ENSG00000135100|P20823-5|HNF1A;REV__nc|ENSG00000135100|P20823-7|HNF1A;REV__nc|ENSG00000135100|P20823-8|HNF1A;REV__nc|ENSG00000135100|P20823|HNF1A	37.15910966729921	0.575322462179216	2				NaN	NaN	0	NaN	1882	2549	4428
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4434	16.396	NaN	7405.3	30	0	2334.6	0.106			+	-1	VSLLCGRRSR	10	57	401.89495182243047	NaN	0	401.89501953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_VSLLC(Carbamidomethyl (C))GRRSR_	REV__ENST00000269349.7_1_17:78113911-78115134:-|nuORF	28.081489160057373	0.40797012399963245	2				NaN	NaN	0	NaN	1883	2549	4428
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4435	16.398	NaN	7025.3	30	0	742.71	0.034	+			9760	ENISKRGGI	9	73	487.2747353301213	NaN	0	487.2747802734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ENISKRGGI_	tr|U7SWX3|U7SWX3_FUSNUuroporphyrinogen-IIIC-methyltransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01206PE=4SV=1	74.25504064058377	0.09106938647426577	2				NaN	NaN	0	NaN	1884	2549	4428
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4452	16.431	NaN	13092	30	0	1217.8	0.214	+			34419	RTTHNIIEK	9	84	556.3140760965413	1110.6135992598824	2	556.3150024414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTTHNIIEK_	ENSG00000198911|ENST00000361204|SREBF2;nc|ENSG00000198911|Q12772-2|SREBF2	114.85826248499774	0.024312442104607014	2				NaN	NaN	0	NaN	1898	2552	4451
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4453	16.435	NaN	28023	30	0	3221.8	0.106	+			353	AAQKNMALK	9	88	487.7753537000503	973.5361544669006	2	487.7760314941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAQKNMALK_	ENSG00000100345|ENST00000216181|MYH9;SYNDIG1-MYH9|1|fusion	191.6257511998002	0.00012895968667509943	2				NaN	NaN	0	NaN	1899	2552	4451
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4454	16.437	NaN	3383.5	30	0	754.38	0.106				-1	 	0	63	481.28697998148914	960.5594070297783	2	481.2872619628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1900	2552	4451
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4455	16.439	NaN	9622.2	30	0	1071	0.106	+			34328	RTNSPGFQK	9	74	517.7721201446276	1033.529687356055	2	517.7726440429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RTNSPGFQK_	ENSG00000139746|ENST00000438737|RBM26;nc|ENSG00000139746|Q5T8P6-2|RBM26;nc|ENSG00000139746|Q5T8P6-3|RBM26;nc|ENSG00000139746|Q5T8P6-4|RBM26;nc|ENSG00000139746|Q5T8P6-5|RBM26;RBM26|p.N783Ifs*5|1|0.11|ENSG00000139746|chr13:79342743-79342743|T/-|frameshift_variant	120.8684288430529	0.02067403653475984	2				NaN	NaN	0	NaN	1901	2552	4451
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4456	16.441	NaN	3764.6	30	0	933.15	0.106				-1	TICEHLQYL	9	56	392.86260980274807	1175.5660000084442	3	392.8629455566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_TIC(Carbamidomethyl (C))EHLQYL_	ENSG00000090686|ENST00000308271|USP48;nc|ENSG00000090686|Q86UV5-2|USP48;nc|ENSG00000090686|Q86UV5-3|USP48;nc|ENSG00000090686|Q86UV5-4|USP48;nc|ENSG00000090686|Q86UV5-7|USP48;nc|ENSG00000090686|Q86UV5-8|USP48;USP48|p.G702Wfs*5|1|0.12|ENSG00000090686|chr1:21706574-21706575|-/A|frameshift_variant;USP48|p.L982Ffs*9|1|0.08|ENSG00000090686|chr1:21690037-21690038|-/GG|frameshift_variant	32.81241826257853	0.4965981579233955	2				NaN	NaN	0	NaN	1902	2552	4451
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4457	16.442	NaN	10508	30	0	1699.9	0.032	+			12062	GAAGPVCSK	9	57	395.1992171611678	788.3838813891356	2	395.19976806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GAAGPVCSK_	ENST00000395863.7_1_20:55841273-55841597:-|nuORF	62.107414245175825	0.1960472003779324	2				NaN	NaN	0	NaN	1903	2552	4451
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4458	16.443	NaN	856.78	30	0	48.137	0.138	+			50715	YEGGISRQ	8	50	455.22433137829364	908.4341098233873	2	455.22454833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YEGGISRQ_	ENSG00000005100|ENST00000225296|DHX33	53.351449002276354	0.5676011784961348	2				NaN	NaN	0	NaN	1904	2552	4451
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4472	16.474	NaN	142990	30	0	36303	0.201	+			5253	ATVDKTVCK	9	108	482.75949347836405	963.5044340235281	2	482.7599792480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATVDKTVCK_	ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1670Tfs*23|1|0.29|ENSG00000174231|chr17:1659487-1659487|C/-|frameshift_variant	190.62248201133156	0.00022967542297918066	2				NaN	NaN	0	NaN	1915	2555	4471
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4473	16.478	NaN	24331	30	0	5267.3	0.106				-1	 	0	65	429.2758460222488	856.5371391112976	2	429.27618408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1916	2555	4471
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4474	16.48	NaN	4002.7	30	0	359.9	0.106	+			10083	ESKEQRCL	8	58	496.74449920259286	991.4744454719857	2	496.744873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ESKEQRCL_	ENST00000377102.5_1_13:80912972-80913233:-|nuORF	68.484700416344	0.4195245774506064	2				NaN	NaN	0	NaN	1917	2555	4471
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4475	16.482	NaN	2066.7	30	0	604.38	0.106	+			354	AAQKNMALK	9	37	325.5196307253911	973.5370627763733	3	325.5198059082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AAQKNMALK_	ENSG00000100345|ENST00000216181|MYH9;SYNDIG1-MYH9|1|fusion	55.50420428727701	0.2510918378945873	2				NaN	NaN	0	NaN	1918	2555	4471
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4476	16.483	NaN	3640.8	30	0	380.12	0.106	+			8467	EASKLAPTAH	10	76	512.7744951107832	1023.5344372883663	2	512.77490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EASKLAPTAH_	tr|U7SQJ3|U7SQJ3_FUSNUNitroreductasedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01657PE=3SV=1	65.2775769800794	0.31784129392001936	2				NaN	NaN	0	NaN	1919	2555	4471
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4477	16.485	NaN	2021.7	30	0	792.36	0.106			+	13912	GRLGGRWR	8	57	479.2771469431905	956.539740953181	2	479.2769775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GRLGGRWR_	REV__ENST00000298838.10_3_11:47203991-47204593:-|nuORF;REV__ENST00000531226.5_3_11:47203991-47204593:-|nuORF	31.954861631926434	0.7126016770032289	2				NaN	NaN	0	NaN	1920	2555	4471
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4478	16.487	NaN	6423.2	30	0	3830.4	0.041			+	-1	EFMRLTMISIE	11	59	467.8963971003616	1400.6673619012847	3	467.8964538574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Oxidation (M)	_EFM(Oxidation (M))RLTM(Oxidation (M))ISIE_	REV__ENSG00000151553|ENST00000369248|FHIP2A;REV__nc|ENSG00000151553|Q5W0V3-2|FHIP2A	22.561587123415745	0.7531385481947795	2				NaN	NaN	0	NaN	1921	2555	4471
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4491	16.515	NaN	37830	30	0	4789.3	0.215	+			39270	STAQRVTYK	9	86	527.2872001324259	1052.5598473316518	2	527.2881469726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STAQRVTYK_	ENSG00000126226|ENST00000337344|PCID2;nc|ENSG00000126226|Q5JVF3-2|PCID2;nc|ENSG00000126226|Q5JVF3-3|PCID2;nc|ENSG00000126226|Q5JVF3-4|PCID2	126.24258497203832	0.01742065577488747	2				NaN	NaN	0	NaN	1931	2558	4490
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4492	16.518	NaN	22855	30	0	3351	0.106				-1	 	0	72	549.3186376809292	1096.6227224286583	2	549.3196411132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1932	2558	4490
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4493	16.52	NaN	27374	30	0	5207	0.106	+			44776	TTQKEHLLK	9	84	366.5486024120484	NaN	0	366.548583984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TTQKEHLLK_	ENSG00000071127|ENST00000499869|WDR1	98.62937762414208	0.024200618960070384	2				NaN	NaN	0	NaN	1933	2558	4490
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4494	16.522	NaN	8686.2	30	0	1996.5	0.106	+			34032	RSLDTHVTK	9	60	352.8643613954935	1055.5712547866806	3	352.8646545410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RSLDTHVTK_	ENSG00000100304|ENST00000216129|TTLL12	30.568863376406313	0.5175653706841606	2				NaN	NaN	0	NaN	1934	2558	4490
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4495	16.524	NaN	6624.2	30	0	889.46	0.106	+			36131	SEKRKQISV	9	70	537.8164621978435	1073.618371462487	2	537.8175048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SEKRKQISV_	ENSG00000100994|ENST00000216962|PYGB;PYGB-C20orf152|1|fusion;PYGB-C20orf152|2|fusion;PYGB|p.T677Kfs*4|1|0.44|ENSG00000100994|chr20:25292466-25292466|C/-|frameshift_variant	63.42647028704847	0.1850514934184437	2				NaN	NaN	0	NaN	1935	2558	4490
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4496	16.526	NaN	10893	30	0	3455.7	0.036			+	34605	RVPCRHTR	8	82	541.2939388519998	1080.5733247707994	2	541.2949829101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_RVPC(Carbamidomethyl (C))RHTR_	REV__ENST00000531660.5_1_11:47270518-47282963:+|nuORF	53.351449002276354	0.5676011784961348	2				NaN	NaN	0	NaN	1936	2558	4490
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4497	16.526	NaN	2233.6	30	0	310.95	0.14	+			42954	TEKAEHSEL	9	63	522.2534805102168	1042.4924080872336	2	522.2542114257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TEKAEHSEL_	ENSG00000104976|ENST00000221573|SNAPC2	54.722347961057174	0.257609425301511	2				NaN	NaN	0	NaN	1937	2558	4490
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4511	16.556	NaN	24917	30	0	10515	0.214	+			23034	KVSYSHIQSK	10	79	392.88355907572196	1175.628847827366	3	392.8839416503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVSYSHIQSK_	ENSG00000047849|ENST00000683076|MAP4;nc|ENSG00000047849|P27816-2|MAP4;nc|ENSG00000047849|P27816-4|MAP4;nc|ENSG00000047849|P27816-6|MAP4;nc|ENSG00000047849|P27816|MAP4	79.48907831485694	0.19979514868675113	2				NaN	NaN	0	NaN	1948	2561	4510
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4512	16.56	NaN	11020	30	0	1301.9	0.106	+			35859	SEDKKRPSL	9	77	530.292912133223	1058.571271333246	2	530.2937622070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEDKKRPSL_	ENSG00000140682|ENST00000394863|TGFB1I1;ENST00000564176.5_1_16:31485144-31486093:+|nuORF;ENST00000567066.6_1_16:31483405-31488894:+|nuORF;ENST00000568142.2_1_16:31484766-31486093:+|nuORF;nc|ENSG00000140682|O43294-2|TGFB1I1	72.87924865735499	0.12833875048249987	2				NaN	NaN	0	NaN	1949	2561	4510
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4513	16.562	NaN	17574	30	0	6483.8	0.106				-1	 	0	70	381.8992334704027	1142.6758710114082	3	381.8995056152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1950	2561	4510
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4514	16.563	NaN	4425.3	30	0	1173.1	0.106			+	26068	LSLRQVRE	8	45	334.201113998938	999.5815125970141	3	334.20135498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSLRQVRE_	REV__nc|ENSG00000215112|Q5RGS3|FAM74A1;REV__nc|ENSG00000274355|Q4VXF1|FAM74A3;REV__nc|ENSG00000277260|A6NL05|FAM74A7	42.396135135203025	0.6414440140393314	2				NaN	NaN	0	NaN	1951	2561	4510
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4515	16.565	NaN	1757.5	30	0	595.3	0.106			+	3318	ASLTLLICGY	10	41	351.8606825094713	1052.560218128614	3	351.8610534667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASLTLLICGY_	REV__ENSG00000106125|ENST00000265299|MINDY4;REV__ENST00000409881.1_1_7:30898614-30931617:+|nuORF	25.450171626174864	0.6719948968573018	2				NaN	NaN	0	NaN	1952	2561	4510
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4516	16.567	NaN	2321	30	0	553.79	0.106	+			15588	GVHGGLINKK	10	35	341.54141180131955	1021.6024060041586	3	341.5417785644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GVHGGLINKK_	ENSG00000108518|ENST00000225655|PFN1	30.503639358989545	0.6307262373768582	2				NaN	NaN	0	NaN	1953	2561	4510
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4517	16.569	NaN	2609.9	30	0	359.21	0.034	+			33379	RHVGCCSR	8	60	459.2134741652039	916.4123953972078	2	459.21392822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RHVGCCSR_	ENST00000415899.1_3_1:204463491-204463809:-|nuORF	34.172542307311794	0.6954784234644539	2				NaN	NaN	0	NaN	1954	2561	4510
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4532	16.6	NaN	24376	30	0	17311	0.214				-1	 	0	56	464.7636864446329	927.5128199560659	2	464.7638244628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1966	2564	4531
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4533	16.604	NaN	17933	30	0	5358.5	0.106	+			4145	ATEQPLTAKK	10	66	362.8760930617212	1085.6064497853636	3	362.8764343261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATEQPLTAKK_	ENSG00000120725|ENST00000394817|SIL1	39.252832667884924	0.5560298534376815	2				NaN	NaN	0	NaN	1967	2564	4531
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4534	16.606	NaN	25801	30	0	13812	0.106				-1	GEVVMSQAIQ	10	72	359.8463924816115	1076.5173480450344	3	359.8466491699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_GEVVM(Oxidation (M))SQAIQ_	ACOT12|p.F169Lfs*59|1|0.34|ENSG00000172497|chr5:81347920-81347920|A/-|frameshift_variant;ENSG00000172497|ENST00000307624|ACOT12;nc|ENSG00000172497|Q8WYK0-2|ACOT12	30.568863376406313	0.6301935916953115	2				NaN	NaN	0	NaN	1968	2564	4531
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4535	16.608	NaN	7241.7	30	0	2606.9	0.106	+			20115	KEKKVINKL	9	57	367.2444720150429	1098.7115866453287	3	367.2446594238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEKKVINKL_	ENSG00000106031|ENST00000649031|HOXA13	47.95952297671804	0.32689736945648856	2				NaN	NaN	0	NaN	1969	2564	4531
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4536	16.61	NaN	7306.7	30	0	1770.6	0.106	+			40116	STPKNSGVAEP	11	68	543.7742860636057	1085.5340191940113	2	543.7752685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STPKNSGVAEP_	ENSG00000166783|ENST00000396368|MARF1;nc|ENSG00000166783|Q9Y4F3-3|MARF1;nc|ENSG00000166783|Q9Y4F3-4|MARF1;nc|ENSG00000166783|Q9Y4F3-5|MARF1	68.78561909154949	0.24586362119257035	2				NaN	NaN	0	NaN	1970	2564	4531
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4537	16.611	NaN	8905.5	30	0	1921.9	0.035			+	17095	HSFIDFSH	8	62	495.2258721744691	988.4371914157382	2	495.2259216308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HSFIDFSH_	REV__ALDH3A2|p.T418I|1|0.28|ENSG00000072210|chr17:19671766-19671766|C/T|missense_variant	38.80614096846853	0.6637206697844082	2				NaN	NaN	0	NaN	1971	2564	4531
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4538	16.612	NaN	3626.2	30	0	877.04	0.139	+			48638	VTSMSTQTK	9	61	491.7459789467919	981.4774049603839	2	491.74700927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VTSMSTQTK_	ENSG00000083937|ENST00000263780|CHMP2B;nc|ENSG00000083937|Q9UQN3-2|CHMP2B	95.81516180277367	0.04847050768394289	2				NaN	NaN	0	NaN	1972	2564	4531
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4551	16.642	NaN	20489	30	0	10156	0.214	+			23006	KVSKELVEK	9	88	353.885020607322	NaN	0	353.885009765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVSKELVEK_	ENSG00000125844|ENST00000377813|RRBP1;nc|ENSG00000125844|Q9P2E9-3|RRBP1;RRBP1|p.A628Gfs*69|1|0.35|ENSG00000125844|chr20:17621915-17621916|-/T|frameshift_variant	88.17693792209575	0.04527150213038833	2				NaN	NaN	0	NaN	1982	2567	4550
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4552	16.646	NaN	6548	30	0	1855.3	0.106	+			38860	SSNSSPIGK	9	61	438.72442558587966	875.4342982385593	2	438.7244873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSNSSPIGK_	ENSG00000080345|ENST00000444746|RIF1;nc|ENSG00000080345|Q5UIP0-2|RIF1	120.30596017624542	0.02101454110788768	2				NaN	NaN	0	NaN	1983	2567	4550
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4553	16.648	NaN	10734	30	0	1348.3	0.106				-1	 	0	69	458.75799325483007	915.5014335764602	2	458.75830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1984	2567	4550
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4554	16.65	NaN	6851.3	30	0	1471.3	0.106	+			5688	AVEGPSEAK	9	60	444.22664735208014	886.4387417709603	2	444.226806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVEGPSEAK_	ENSG00000196924|ENST00000369850|FLNA;ENST00000490936.5_1_X:153579531-153588003:-|nuORF;FLNA|p.G2237Efs*109|1|0.28|ENSG00000196924|chrX:154352240-154352240|C/-|frameshift_variant;FLNA|p.Q1716Sfs*23|2|0.38|ENSG00000196924|chrX:154354896-154354896|G/-|frameshift_variant;FLNA|p.R2520Vfs*16|1|0.7|ENSG00000196924|chrX:154349560-154349560|G/-|frameshift_variant;nc|ENSG00000196924|P21333-2|FLNA	101.60071028292904	0.0375685401170269	2				NaN	NaN	0	NaN	1985	2567	4550
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4555	16.651	NaN	3400.4	30	0	501.61	0.106	+			3606	ASVSGTNVK	9	59	431.7346355373678	861.4547181415356	2	431.73492431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASVSGTNVK_	ENSG00000139697|ENST00000602398|SBNO1;nc|ENSG00000139697|A3KN83-2|SBNO1;nc|ENSG00000139697|A3KN83-3|SBNO1	88.17693792209575	0.07000514020414955	2				NaN	NaN	0	NaN	1986	2567	4550
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4556	16.653	NaN	4195.2	30	0	390.79	0.034	+			19788	KEAPAPPKA	9	62	454.7631539062919	907.5117548793838	2	454.7633361816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KEAPAPPKA_	ENSG00000198242|ENST00000422514|RPL23A;ENST00000399247.6_1_6:29694709-29694913:-|nuORF;ENST00000582736.1_1_17:27047023-27047984:+|nuORF;ENST00000606975.1_1_8:163470-182153:-|nuORF	106.68306549817024	0.032382560583716295	2				NaN	NaN	0	NaN	1987	2567	4550
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4557	16.654	NaN	3605.7	30	0	318.19	0.14	+			21724	KQKVGEGKQ	9	64	501.2905236198386	1000.5664943064772	2	501.291259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KQKVGEGKQ_	ENSG00000145087|ENST00000471454|STXBP5L;nc|ENSG00000145087|Q9Y2K9|STXBP5L	78.26377905018397	0.10505600812668463	2				NaN	NaN	0	NaN	1988	2567	4550
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4571	16.684	NaN	426010	30	0	116100	0.202				-1	 	0	145	333.18168581289314	996.5232280388794	3	333.181884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1999	2570	4570
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4572	16.688	NaN	23239	30	0	4996.2	0.106	+			36662	SGMGSTVSK	9	69	427.20719604478114	852.3998391563623	2	427.2076721191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SGMGSTVSK_	ENSG00000132383|ENST00000254719|RPA1;RPA1|p.N274Mfs*5|1|0.18|ENSG00000132383|chr17:1879272-1879272|A/-|frameshift_variant	123.20810148215591	0.019257656778428764	2				NaN	NaN	0	NaN	2000	2570	4570
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4573	16.69	NaN	11037	30	0	3508.1	0.106	+			14506	GTDEHVVCK	9	71	494.2314163282202	986.4482797232404	2	494.23175048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTDEHVVCK_	nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM	118.74307786436346	0.02196067127630568	2				NaN	NaN	0	NaN	2001	2570	4570
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4574	16.692	NaN	4113.5	30	0	945.78	0.106			+	-1	SASPKQMPAG	10	47	330.49434373239114	NaN	0	330.5356750488281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_SASPKQM(Oxidation (M))PAG_	REV__CDHR2|p.R383Afs*51|1|0.42|ENSG00000074276|chr5:176576133-176576133|C/-|frameshift_variant	41.42661286455405	0.3598046802465243	2				NaN	NaN	0	NaN	2002	2570	4570
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4575	16.693	NaN	7109.8	30	0	1449	0.106	+			38945	SSQQSVMSK	9	64	491.2366400533071	980.4587271734142	2	491.2370300292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSQQSVMSK_	ENSG00000173193|ENST00000474629|PARP14;nc|ENSG00000173193|Q460N5-1|PARP14;nc|ENSG00000173193|Q460N5-3|PARP14;nc|ENSG00000173193|Q460N5-4|PARP14;nc|ENSG00000173193|Q460N5-5|PARP14;PARP14|p.N1416Efs*19|1|0.2|ENSG00000173193|chr3:122718388-122718389|-/A|frameshift_variant	142.36107225718385	0.009372392051035914	2				NaN	NaN	0	NaN	2003	2570	4570
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4576	16.695	NaN	9286.5	30	0	1490.6	0.106			+	15601	GVILGHTEPG	10	64	327.1781240184164	978.5125426554491	3	327.1782531738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GVILGHTEPG_	REV__ENST00000220562.8_1_8:28559161-28573151:+|nuORF;REV__ENST00000518223.1_1_8:28567978-28573151:+|nuORF	42.86426827375447	0.522752283233888	2				NaN	NaN	0	NaN	2004	2570	4570
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4577	16.697	NaN	10289	30	0	1428.6	0.034	+			41856	SVTEPSQGR	9	62	480.73992962052904	959.4653063078581	2	480.7393493652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVTEPSQGR_	ENSG00000019102|ENST00000326621|VSIG2;nc|ENSG00000019102|Q96IQ7-2|VSIG2	82.24051045832904	0.08786059719216216	2				NaN	NaN	0	NaN	2005	2570	4570
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4589	16.721	NaN	87953	30	0	18821	0.214	+			40221	STSENITQK	9	94	504.25386218084066	1006.4931714284813	2	504.253662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STSENITQK_	DDX3Y|p.V655Gfs*2|1|0.09|ENSG00000067048|chrY:12918097-12918098|-/G|frameshift_variant;ENSG00000067048|ENST00000336079|DDX3Y;ENSG00000215301|ENST00000644876|DDX3X;nc|ENSG00000067048|O15523-2|DDX3Y;nc|ENSG00000215301|O00571-2|DDX3X	209.21039097705471	5.5375157516244266E-08	2				NaN	NaN	0	NaN	2014	2573	4588
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4590	16.725	NaN	6012.1	30	0	1448.9	0.106	+			25437	LPPGAIAGAG	10	61	412.2368447122205	822.459136491241	2	412.2372131347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LPPGAIAGAG_	ENSG00000164916|ENST00000328914|FOXK1;FOXK1|p.Y219Pfs*84|1|0.31|ENSG00000164916|chr7:4740930-4740931|TG/-|frameshift_variant	35.200714571348534	0.5923680232273616	2				NaN	NaN	0	NaN	2015	2573	4588
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4591	16.727	NaN	10435	30	0	686.26	0.106	+			25983	LSKAQFHS	8	76	459.2466325547776	916.4787121763552	2	459.2469787597656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSKAQFHS_	ENSG00000100479|ENST00000216367|POLE2;nc|ENSG00000100479|P56282-2|POLE2;nc|ENSG00000100479|P56282-3|POLE2;POLE2|p.Y457Cfs*9|1|0.25|ENSG00000100479|chr14:49650391-49650392|AT/-|frameshift_variant	51.33545320467046	0.5859736979383976	2				NaN	NaN	0	NaN	2016	2573	4588
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4592	16.729	NaN	17835	30	0	2595.3	0.106			+	42145	SYPWSGVA	8	78	433.70540319465584	NaN	0	433.705322265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SYPWSGVA_	REV__PCDHA8|p.S749P|1|0.13|ENSG00000204962|chr5:140843566-140843566|T/C|missense_variant	35.200714571348534	1.7418937515398478	2				NaN	NaN	0	NaN	2017	2573	4588
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4593	16.73	NaN	3224.4	30	0	584.25	0.106	+			37872	SNSYAIKK	8	59	455.7523459490531	909.4901389649062	2	455.75299072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SNSYAIKK_	ENSG00000083845|ENST00000196551|RPS5;ENST00000599232.1_1_19:58906030-58906114:+|nuORF	90.36981228632155	0.27635063874291205	2				NaN	NaN	0	NaN	2018	2573	4588
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4594	16.732	NaN	2077.3	30	0	282.16	0.035	+			38866	SSNSYAIKK	9	50	499.2689786425099	996.5234043518199	2	499.2695007324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSNSYAIKK_	ENSG00000083845|ENST00000196551|RPS5;ENST00000599232.1_1_19:58906030-58906114:+|nuORF	84.81729255234993	0.07947707105691067	2				NaN	NaN	0	NaN	2019	2573	4588
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4595	16.733	NaN	2974.3	30	0	358.76	0.144	+			40513	STYRKFSTK	9	50	373.2044722042859	1116.5915872130577	3	373.2047119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STYRKFSTK_	CDH1|p.F462Lfs*19|1|0.16|ENSG00000039068|chr16:68815577-68815577|T/-|frameshift_variant;CDH1|p.N315Kfs*6|1|0.32|ENSG00000039068|chr16:68811790-68811791|-/A|frameshift_variant;CDH1|p.P126Rfs*89|3|0.3|ENSG00000039068|chr16:68801878-68801878|C/-|frameshift_variant;ENSG00000039068|ENST00000261769|CDH1;ENST00000562836.5_1_16:68797408-68867399:+|nuORF;nc|ENSG00000039068|P12830-2|CDH1	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	2020	2573	4588
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4608	16.761	NaN	39905	30	0	4380.1	0.214	+			51286	YSAARSAAA	9	96	434.219242179155	866.42393142511	2	434.2196350097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YSAARSAAA_	ENSG00000189143|ENST00000340958|CLDN4	129.42129120953632	0.01549634589885217	2				NaN	NaN	0	NaN	2030	2576	4607
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4609	16.765	NaN	15605	30	0	4590.5	0.106	+			4434	ATIKDGKSLTK	11	66	387.8990615968947	1160.675355390884	3	387.8995056152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATIKDGKSLTK_	ENSG00000166411|ENST00000299518|IDH3A;nc|ENSG00000166411|P50213-2|IDH3A	82.49433358170734	0.13157841501534762	2				NaN	NaN	0	NaN	2031	2576	4607
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4610	16.767	NaN	13938	30	0	5665.1	0.106	+			13537	GLSEQEAQK	9	85	495.2483320988551	988.4821112645102	2	495.2486572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GLSEQEAQK_	ENSG00000082212|ENST00000321341|ME2;nc|ENSG00000082212|P23368-2|ME2	131.61620852596164	0.014413238321579053	2				NaN	NaN	0	NaN	2032	2576	4607
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4611	16.769	NaN	4561	30	0	703.53	0.106	+			5535	AVAIKAMAK	9	61	459.7753548428284	917.5361567524568	2	459.7756652832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_AVAIKAM(Oxidation (M))AK_	EIF5A|p.A145P|1|0.15|ENSG00000132507|chr17:7311608-7311608|G/C|missense_variant;ENSG00000132507|ENST00000336458|EIF5A;ENSG00000253626|ENST00000520547|EIF5AL1;nc|ENSG00000132507|P63241-2|EIF5A	53.351449002276354	0.2690372970092375	2				NaN	NaN	0	NaN	2033	2576	4607
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4612	16.77	NaN	1865	30	0	786.25	0.106			+	37565	SLMIYLVVGL	10	28	369.8890380859375	NaN	0	369.8890380859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SLMIYLVVGL_	REV__ENSG00000079277|ENST00000371945|MKNK1;REV__ENST00000531355.5_1_1:47027303-47048968:-|nuORF;REV__nc|ENSG00000079277|Q9BUB5-2|MKNK1;REV__nc|ENSG00000079277|Q9BUB5-3|MKNK1;REV__nc|ENSG00000079277|Q9BUB5|MKNK1	22.579656572578934	0.4201028297492154	2				NaN	NaN	0	NaN	2034	2576	4607
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4613	16.772	NaN	4385.6	30	0	1759.3	0.035	+			16947	HPNQEAHSL	9	62	516.7467441830174	1031.4789354328348	2	516.7468872070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HPNQEAHSL_	ENSG00000073060|ENST00000261693|SCARB1;ENST00000535005.5_1_12:125267231-125351555:-|nuORF;nc|ENSG00000073060|Q8WTV0-3|SCARB1;nc|ENSG00000073060|Q8WTV0-4|SCARB1;nc|ENSG00000073060|Q8WTV0-5|SCARB1;nc|ENSG00000073060|Q8WTV0|SCARB1	62.107414245175825	0.1960472003779324	2				NaN	NaN	0	NaN	2035	2576	4607
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4614	16.773	NaN	1758	30	0	191.27	0.14	+			33497	RKITGQAGW	9	52	508.7875421695654	NaN	0	508.7872619628906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RKITGQAGW_	ENST00000580048.1_1_18:72263866-72264067:-|nuORF	49.44154591367651	0.21054156626303966	2				NaN	NaN	0	NaN	2036	2576	4607
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4627	16.802	NaN	218750	30	0	56299	0.214				-1	 	0	89	565.8233732766963	1129.6321936201925	2	565.8248291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2046	2579	4626
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4628	16.806	NaN	69950	30	0	26946	0.106			+	4133	ATEKVRVGK	9	96	329.86953432524365	986.5867735759309	3	329.8697509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATEKVRVGK_	REV__ENSG00000196924|ENST00000369850|FLNA;REV__FLNA|p.A1026Lfs*20|1|0.42|ENSG00000196924|chrX:154361439-154361439|C/-|frameshift_variant;REV__FLNA|p.D535Mfs*34|1|0.31|ENSG00000196924|chrX:154365224-154365224|C/-|frameshift_variant;REV__FLNA|p.G2237Efs*109|1|0.28|ENSG00000196924|chrX:154352240-154352240|C/-|frameshift_variant;REV__FLNA|p.Q1716Sfs*23|2|0.38|ENSG00000196924|chrX:154354896-154354896|G/-|frameshift_variant;REV__FLNA|p.R2520Vfs*16|1|0.7|ENSG00000196924|chrX:154349560-154349560|G/-|frameshift_variant;REV__nc|ENSG00000196924|P21333-2|FLNA	60.97194046774394	0.20551255781574032	2				NaN	NaN	0	NaN	2047	2579	4626
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4629	16.808	NaN	18440	30	0	2750.1	0.106	+			14810	GTLGAVHK	8	77	391.7293327244453	781.4441125156907	2	391.7296142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTLGAVHK_	ENSG00000099785|ENST00000215555|MARCHF2;nc|ENSG00000099785|Q9P0N8-2|MARCHF2	97.47269410471826	0.25484828363392314	2				NaN	NaN	0	NaN	2048	2579	4626
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4630	16.809	NaN	123580	30	0	14990	0.106	+			30422	PWVKSPPLLM	10	123	395.2225824315647	1182.6459178948942	3	395.222900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_PWVKSPPLLM(Oxidation (M))_	ANKRD34B|p.P416Qfs*4|1|0.28|ENSG00000189127|chr5:80558773-80558773|G/-|frameshift_variant;ANKRD34B|p.V479Sfs*11|1|0.27|ENSG00000189127|chr5:80558585-80558586|-/T|frameshift_variant;ENSG00000189127|ENST00000338682|ANKRD34B	68.84614121027924	0.2867470276772903	2				NaN	NaN	0	NaN	2049	2579	4626
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4631	16.811	NaN	5122.3	30	0	1335.6	0.106	+			33013	REHEKEVL	8	64	520.2793695908333	1038.5441862484665	2	520.2807006835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_REHEKEVL_	ENSG00000117632|ENST00000455785|STMN1;ENST00000465604.1_1_1:26227509-26228203:-|nuORF;ENST00000485226.1_1_1:26227942-26230296:-|nuORF;nc|ENSG00000117632|P16949-2|STMN1	90.60085204095205	0.2756512185673585	2				NaN	NaN	0	NaN	2050	2579	4626
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4632	16.813	NaN	2319.2	30	0	298.26	0.038			+	25422	LPLSHKLTEQ	10	54	389.2237420379522	1164.6493967140566	3	389.2240295410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LPLSHKLTEQ_	REV__ENSG00000120278|ENST00000696526|PLEKHG1;REV__PLEKHG1|p.S974Afs*5|1|0.07|ENSG00000120278|chr6:150832027-150832027|A/-|frameshift_variant	31.634271133179894	0.6214930414500597	2				NaN	NaN	0	NaN	2051	2579	4626
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4633	16.814	NaN	39035	30	0	19503	0.144	+			32512	QVQPVDGATRK	11	72	400.22241308135153	1197.6454098442546	3	400.2228088378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QVQPVDGATRK_	ENSG00000182307|ENST00000331434|C8orf33;ENST00000524395.5_1_8:146277890-146279540:+|nuORF;ENST00000530455.5_1_8:146277890-146279540:+|nuORF;ENST00000534350.5_1_8:146279384-146279540:+|nuORF;nc|nan|Q9H7E9-2|C8orf33	38.753607047826485	0.5749975102143227	2				NaN	NaN	0	NaN	2052	2579	4626
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4644	16.84	NaN	21296	30	0	4819.3	0.214				-1	 	0	58	377.5517257477391	1129.6333478434174	3	377.5520324707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2060	2582	4643
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4645	16.843	NaN	15613	30	0	3183.9	0.106	+			6381	AVVEKIHAK	9	78	497.80537861685264	993.5962043005053	2	497.8057861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVVEKIHAK_	ENSG00000172432|ENST00000307126|GTPBP2;nc|ENSG00000172432|Q9BX10-2|GTPBP2;nc|ENSG00000172432|Q9BX10-3|GTPBP2;nc|ENSG00000172432|Q9BX10-4|GTPBP2	136.98908636845044	0.011892605960677736	2				NaN	NaN	0	NaN	2061	2582	4643
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4646	16.845	NaN	7503.6	30	0	1342.6	0.106	+			5600	AVCEKTFKH	9	59	373.8582973751393	1118.5530627256178	3	373.8586730957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_AVC(Carbamidomethyl (C))EKTFKH_	ENSG00000166188|ENST00000299237|ZNF319	51.33545320467046	0.2872990594074956	2				NaN	NaN	0	NaN	2062	2582	4643
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4647	16.847	NaN	26675	30	0	13572	0.106			+	-1	LNKFTARMV	9	78	365.87140424952696	1094.592383348781	3	365.8718566894531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_LNKFTARM(Oxidation (M))V_	REV__ENSG00000188033|ENST00000311437|ZNF490	51.52775601994872	0.28504342437107444	2				NaN	NaN	0	NaN	2063	2582	4643
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4648	16.849	NaN	18738	30	0	5197.3	0.106	+			22573	KTSSAFVGK	9	66	462.76058875675886	923.5066245803177	2	462.76104736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KTSSAFVGK_	ENSG00000173692|ENST00000308696|PSMD1;nc|ENSG00000173692|Q99460-2|PSMD1;PSMD1-NHEJ1|1|fusion;PSMD1|p.K849Rfs*44|1|0.38|ENSG00000173692|chr2:231165258-231165258|A/-|frameshift_variant;PSMD1|p.L603Afs*7|1|0.19|ENSG00000173692|chr2:231085100-231085101|-/T|frameshift_variant;PSMD1|p.N355Tfs*17|1|0.23|ENSG00000173692|chr2:231077150-231077150|A/-|frameshift_variant	117.81106730687013	0.02252488733980868	2				NaN	NaN	0	NaN	2064	2582	4643
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4649	16.85	NaN	2044.1	30	0	170.1	0.033			+	12262	GAVIEPAGR	9	64	435.2452168511115	868.475880769023	2	435.2456359863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GAVIEPAGR_	REV__ENST00000328560.12_2_3:130613343-130613580:+|nuORF	55.50420428727701	0.2510918378945873	2				NaN	NaN	0	NaN	2065	2582	4643
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4650	16.851	NaN	5056	30	0	1348.7	0.14			+	20136	KEKPAAQVE	9	59	500.27683040889383	998.5391078845877	2	500.27734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KEKPAAQVE_	REV__ENSG00000185298|ENST00000329214|CCDC137	72.87924865735499	0.12833875048249987	2				NaN	NaN	0	NaN	2066	2582	4643
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4663	16.88	NaN	52283	30	0	27227	0.215				-1	 	0	65	406.2003527448835	810.386152556567	2	406.2008056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2076	2585	4662
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4664	16.884	NaN	6426.6	30	0	1671.4	0.106			+	43427	TGKSALQEVEK	11	52	397.2189468562411	1188.6350111689233	3	397.2192687988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TGKSALQEVEK_	REV__ENSG00000123165|ENST00000371124|ACTRT1	34.08650109265054	0.6322515996262609	2				NaN	NaN	0	NaN	2077	2585	4662
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4665	16.886	NaN	5688.3	30	0	2245.4	0.106				-1	GQCGPVGVRK	10	46	353.1902898965059	1056.5490402897176	3	353.1905212402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_GQC(Carbamidomethyl (C))GPVGVRK_	ENSG00000204231|ENST00000374680|RXRB;nc|ENSG00000204231|P28702-3|RXRB;RXRB|p.G327Vfs*10|1|0.45|ENSG00000204231|chr6:33196447-33196447|C/-|frameshift_variant;RXRB|p.P176Lfs*4|1|0.65|ENSG00000204231|chr6:33198421-33198421|G/-|frameshift_variant	40.05817265558897	0.5486090488315611	2				NaN	NaN	0	NaN	2078	2585	4662
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4666	16.888	NaN	6583.3	30	0	2060.1	0.106	+			44657	TTGEPATPK	9	64	451.23441767514527	900.4542824170906	2	451.234619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TTGEPATPK_	ENSG00000005302|ENST00000312196|MSL3;MSL3|p.P440Qfs*22|1|0.32|ENSG00000005302|chrX:11772188-11772188|C/-|frameshift_variant;nc|ENSG00000005302|Q8N5Y2-2|MSL3;nc|ENSG00000005302|Q8N5Y2-3|MSL3;nc|ENSG00000005302|Q8N5Y2-4|MSL3;nc|ENSG00000005302|Q8N5Y2-5|MSL3;nc|ENSG00000005302|Q8N5Y2-6|MSL3	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	2079	2585	4662
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4667	16.889	NaN	11708	30	0	1653.1	0.106			+	6895	CLQCSQAEVKD	11	70	446.5321044641974	1336.5744839927922	3	446.5322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))LQC(Carbamidomethyl (C))SQAEVKD_	REV__ENSG00000141956|ENST00000398548|PRDM15;REV__nc|ENSG00000141956|P57071-2|PRDM15;REV__nc|ENSG00000141956|P57071-3|PRDM15;REV__nc|ENSG00000141956|P57071|PRDM15	55.08391021199286	0.3673379875553588	2				NaN	NaN	0	NaN	2080	2585	4662
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4668	16.891	NaN	1614.1	30	0	397.43	0.035	+			13532	GLRRRHSL	8	33	332.20623779296875	NaN	0	332.20623779296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GLRRRHSL_	ENST00000431044.5_1_22:19706003-19707129:+|nuORF;ENST00000455843.5_1_22:19705679-19706159:+|nuORF	25.450171626174864	1.7418937515398478	2				NaN	NaN	0	NaN	2081	2585	4662
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4669	16.892	NaN	4130.1	30	0	748.17	0.142	+			18790	ITQTIKCSHE	10	39	387.1983203537253	1158.573131661376	3	387.1985168457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ITQTIKCSHE_	ENSG00000166035|ENST00000299022|LIPC	29.550750289552195	0.6385079145554603	2				NaN	NaN	0	NaN	2082	2585	4662
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4683	16.922	NaN	6060	30	0	787.4	0.214	+			23033	KVSYKGSPA	9	68	468.76228248575615	935.5100120383123	2	468.7625427246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVSYKGSPA_	ENSG00000127616|ENST00000344626|SMARCA4;ENST00000592604.5_1_19:11123597-11172489:+|nuORF;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;nc|ENSG00000127616|P51532-5|SMARCA4;SMARCA4|p.G1136Afs*4|1|0.27|ENSG00000127616|chr19:11030751-11030751|G/-|frameshift_variant;SMARCA4|p.P1453Lfs*10|1|0.31|ENSG00000127616|chr19:11041491-11041491|C/-|frameshift_variant	87.75429964447693	0.0711966946989736	2				NaN	NaN	0	NaN	2093	2588	4682
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4684	16.926	NaN	17414	30	0	2983.1	0.106			+	13313	GKGWCRPAAL	10	72	529.7822108073024	1057.5498686814046	2	529.7835083007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GKGWCRPAAL_	REV__ENST00000486818.5_1_7:72951459-72951579:-|nuORF	58.78195531508484	0.37691818691852547	2				NaN	NaN	0	NaN	2094	2588	4682
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4685	16.928	NaN	6379.4	30	0	529.37	0.106	+			3610	ASVSSSVAK	9	68	418.2294095583914	NaN	0	418.2294921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASVSSSVAK_	ENSG00000168564|ENST00000504169|CDKN2AIP	52.936696900407355	0.1864545979552969	2				NaN	NaN	0	NaN	2095	2588	4682
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4686	16.93	NaN	5282	30	0	638.54	0.106	+			15083	GTQFGGNI	8	54	397.1955555725541	792.3765582119082	2	397.1957092285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTQFGGNI_	ENST00000293880.9_1_11:57100225-57103093:-|nuORF	35.200714571348534	0.6875396545722289	2				NaN	NaN	0	NaN	2096	2588	4682
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4687	16.932	NaN	18361	30	0	2402.2	0.106	+			20073	KEKGKISSL	9	82	495.3028711976326	988.5911894620652	2	495.30328369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEKGKISSL_	ENSG00000131558|ENST00000253861|EXOC4;ENST00000462055.5_1_7:132937857-133164897:+|nuORF;ENST00000486013.5_1_7:132937857-133314895:+|nuORF;EXOC4|p.N439Ifs*15|1|0.39|ENSG00000131558|chr7:133475456-133475456|A/-|frameshift_variant;EXOC4|p.N439Kfs*28|1|0.17|ENSG00000131558|chr7:133475455-133475456|-/A|frameshift_variant;nc|ENSG00000131558|Q96A65-2|EXOC4	83.6470233535746	0.08277643980271215	2				NaN	NaN	0	NaN	2097	2588	4682
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4688	16.933	NaN	2087.3	30	0	299.77	0.106				-1	CLKALKNCL	9	57	531.7937069715721	NaN	0	531.7938232421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_CLKALKNC(Carbamidomethyl (C))L_	CASP8AP2|p.E1628Mfs*58|1|0.49|ENSG00000118412|chr6:89868163-89868164|-/AT|frameshift_variant	37.15910966729921	0.2899585034171616	2				NaN	NaN	0	NaN	2098	2588	4682
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4689	16.935	NaN	10927	30	0	2055.9	0.037	+			4463	ATIQEMRLK	9	65	369.20565066839055	1104.5951226053717	3	369.2060241699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_ATIQEM(Oxidation (M))RLK_	ENST00000263636.4_1_2:160690662-160692029:-|nuORF	49.44154591367651	0.3095138337212152	2				NaN	NaN	0	NaN	2099	2588	4682
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4702	16.962	NaN	40079	30	0	3406.2	0.214				-1	 	0	101	495.7714599497891	989.5283669663783	2	495.7718200683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2109	2591	4701
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4703	16.966	NaN	6210.8	30	0	746.31	0.106			+	22636	KTVKHPKS	8	64	462.7844353821035	923.554317831007	2	462.78472900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTVKHPKS_	REV__ENSG00000130382|ENST00000252674|MLLT1;REV__MLLT1|p.Q461Rfs*46|2|0.33|ENSG00000130382|chr19:6213965-6213965|G/-|frameshift_variant	31.529811441608018	0.715883593221515	2				NaN	NaN	0	NaN	2110	2591	4701
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4704	16.968	NaN	3274.2	30	0	609.19	0.106	+			28111	NAHESKQMY	9	52	554.247297690345	1106.48004244749	2	554.2484741210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NAHESKQMY_	ENSG00000108639|ENST00000225777|SYNGR2;ENST00000591770.1_1_17:76164697-76167257:+|nuORF;nc|ENSG00000108639|O43760-2|SYNGR2	87.69643885390035	0.07135982304947239	2				NaN	NaN	0	NaN	2111	2591	4701
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4705	16.969	NaN	7207.3	30	0	1581.4	0.106	+			39305	STASSLQAK	9	59	446.73998155699144	891.4654101807829	2	446.740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STASSLQAK_	DST|p.K5076Nfs*24|1|0.31|ENSG00000151914|chr6:56472218-56472218|T/-|frameshift_variant;DST|p.T4428Nfs*23|1|0.12|ENSG00000151914|chr6:56497896-56497897|-/T|frameshift_variant;ENSG00000151914|ENST00000680361|DST;nc|ENSG00000151914|Q03001-14|DST;nc|ENSG00000151914|Q03001-8|DST;nc|ENSG00000151914|Q03001|DST	72.87924865735499	0.12833875048249987	2				NaN	NaN	0	NaN	2112	2591	4701
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4706	16.971	NaN	10191	30	0	1620.8	0.106	+			10608	EYLTRHVI	8	70	515.7865020119496	1029.558451090699	2	515.7877197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EYLTRHVI_	ENSG00000163513|ENST00000295754|TGFBR2;nc|ENSG00000163513|P37173-2|TGFBR2;TGFBR2|p.H523Rfs*19|1|0.27|ENSG00000163513|chr3:30691458-30691459|-/GACC|frameshift_variant	87.75429964447693	0.2842685068779738	2				NaN	NaN	0	NaN	2113	2591	4701
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4707	16.973	NaN	2672.8	30	0	359.1	0.038			+	28887	NQGLGGTF	8	44	397.1955555725541	792.3765582119082	2	396.8788146972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NQGLGGTF_	REV__ENSG00000272391|ENST00000615331|POM121C;REV__nc|ENSG00000272391|A8CG34|POM121C	19.359975847455235	0.7988239741663654	2				NaN	NaN	0	NaN	2114	2591	4701
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4708	16.974	NaN	10922	30	0	2053.1	0.141	+			20466	KEVNMHISL	9	69	362.85836205946396	1085.553256778592	3	362.8585510253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_KEVNM(Oxidation (M))HISL_	ENST00000490635.1_1_X:54026257-54040884:-|nuORF	56.43379154798735	0.2433427591689151	2				NaN	NaN	0	NaN	2115	2591	4701
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4719	17.001	NaN	25143	30	0	6206.5	0.214	+			32961	REDNQTNRL	9	80	573.2857428597663	1144.5569327863325	2	573.2870483398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_REDNQTNRL_	ENSG00000087460|ENST00000371085|GNAS;ENST00000313949.11_1_20:57415898-57485881:+|nuORF;ENST00000371075.7_3_20:57415898-57485881:+|nuORF;ENST00000476196.5_1_20:57478538-57485881:+|nuORF;ENST00000477931.5_1_20:57464155-57485881:+|nuORF;ENST00000480975.5_1_20:57464272-57485881:+|nuORF;ENST00000496934.5_1_20:57473969-57485881:+|nuORF;nc|ENSG00000087460|P63092-2|GNAS;nc|ENSG00000087460|P63092-3|GNAS;nc|ENSG00000087460|P63092-4|GNAS;nc|ENSG00000087460|Q5JWF2-2|GNAS;nc|ENSG00000087460|Q5JWF2|GNAS	126.24258497203832	0.01742065577488747	2				NaN	NaN	0	NaN	2123	2594	4718
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4720	17.004	NaN	9349.3	30	0	2675.1	0.106	+			15027	GTNHQLTVK	9	69	499.27449276997163	996.5344326067433	2	499.2748107910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTNHQLTVK_	ENSG00000142197|ENST00000691173|DOP1B;nc|ENSG00000142197|Q9Y3R5-2|DOP1B	106.88024417677582	0.032181361622142884	2				NaN	NaN	0	NaN	2124	2594	4718
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4721	17.006	NaN	5719.9	30	0	1253.2	0.106	+			23070	KVTTSITSK	9	69	482.7868122872866	963.5590716413732	2	482.78729248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KVTTSITSK_	ENSG00000082074|ENST00000512982|FYB1;nc|ENSG00000082074|O15117-3|FYB1;nc|ENSG00000082074|O15117|FYB1	62.166158670854095	0.19555750436066183	2				NaN	NaN	0	NaN	2125	2594	4718
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4722	17.008	NaN	4325	30	0	633.74	0.106			+	26425	LTGDLCES	8	55	419.1865393539364	836.3585257746728	2	419.1870422363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LTGDLCES_	REV__ENSG00000164077|ENST00000296473|MON1A;REV__ENST00000473451.1_1_3:49950446-49967283:-|nuORF;REV__ENST00000486107.5_1_3:49947550-49967319:-|nuORF;REV__nc|ENSG00000164077|Q86VX9-2|MON1A;REV__nc|ENSG00000164077|Q86VX9-3|MON1A;REV__nc|ENSG00000164077|Q86VX9-4|MON1A;REV__nc|ENSG00000164077|Q86VX9|MON1A	52.29916861842294	0.578018602984656	2				NaN	NaN	0	NaN	2126	2594	4718
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4723	17.01	NaN	17255	30	0	3349.6	0.106	+			14815	GTLGGLTAAG	10	77	409.22346049192765	816.4323680506553	2	409.22430419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTLGGLTAAG_	ENST00000479818.5_1_22:50713453-50713714:-|nuORF	87.75429964447693	0.1439309699732727	2				NaN	NaN	0	NaN	2127	2594	4718
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4724	17.012	NaN	2998.7	30	0	303.54	0.106	+			31913	QQLETVKR	8	63	501.2905236198386	1000.5664943064772	2	501.2903747558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QQLETVKR_	ENSG00000206113|ENST00000635017|CFAP99	52.936696900407355	0.5717071646657654	2				NaN	NaN	0	NaN	2128	2594	4718
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4725	17.013	NaN	2421.3	30	0	644.3	0.035			+	-1	LVEELPMPV	9	63	521.7798336472608	1041.5451143613216	2	521.7807006835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_LVEELPM(Oxidation (M))PV_	REV__CDK20|p.H319Tfs*16|1|0.17|ENSG00000156345|chr9:87967548-87967548|G/-|frameshift_variant;REV__ENSG00000156345|ENST00000325303|CDK20;REV__ENST00000459720.5_1_9:90582379-90584273:-|nuORF;REV__ENST00000486228.7_1_9:90582379-90585754:-|nuORF;REV__ENST00000603475.1_1_9:90584039-90584273:-|nuORF;REV__nc|ENSG00000156345|Q8IZL9-3|CDK20;REV__nc|ENSG00000156345|Q8IZL9-4|CDK20;REV__nc|ENSG00000156345|Q8IZL9-5|CDK20	26.79610172149135	0.5528238334041078	2				NaN	NaN	0	NaN	2129	2594	4718
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4737	17.039	NaN	7477.5	30	0	2196.2	0.214	+			22787	KVFGGTVHK	9	72	486.7842059710921	971.5538590089842	2	486.7845764160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVFGGTVHK_	ENSG00000163655|ENST00000496455|GMPS;GMPS|p.S473Lfs*26|1|0.37|ENSG00000163655|chr3:155922281-155922281|T/-|frameshift_variant;nc|ENSG00000163655|P49915-2|GMPS	136.26810882979174	0.012230845423532208	2				NaN	NaN	0	NaN	2138	2597	4736
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4738	17.043	NaN	10630	30	0	5480.8	0.106				-1	GTMVVDRAL	9	38	326.50743338861565	976.500470766047	3	326.50762939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_GTM(Oxidation (M))VVDRAL_	ENSG00000154864|ENST00000674853|PIEZO2;nc|ENSG00000154864|Q9H5I5-2|PIEZO2;nc|ENSG00000154864|Q9H5I5-3|PIEZO2;nc|ENSG00000154864|Q9H5I5-4|PIEZO2;nc|ENSG00000154864|Q9H5I5|PIEZO2;PIEZO2|p.E2492Kfs*3|1|0.27|ENSG00000154864|chr18:10680339-10680339|T/-|frameshift_variant;PIEZO2|p.L2716Ffs*33|1|0.12|ENSG00000154864|chr18:10671638-10671639|-/A|frameshift_variant;PIEZO2|p.Y2489Sfs*7|1|0.06|ENSG00000154864|chr18:10680346-10680347|-/GG|frameshift_variant	39.252832667884924	0.4290233611298554	2				NaN	NaN	0	NaN	2139	2597	4736
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4739	17.045	NaN	31092	30	0	5875.6	0.106	+			19426	KAPVTKVAA	9	78	442.78152276223403	883.5484925912681	2	442.7816467285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KAPVTKVAA_	ENSG00000107438|ENST00000329399|PDLIM1;ENST00000604187.1_1_14:50517346-50518003:+|nuORF	82.7504851949679	0.08565546331141553	2				NaN	NaN	0	NaN	2140	2597	4736
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4740	17.047	NaN	6705.2	30	0	1355.7	0.106	+			1916	AIQPNTTGK	9	57	465.25579752452853	928.4970421158571	2	465.25579833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AIQPNTTGK_	ENSG00000092820|ENST00000367075|EZR;ENSG00000137710|ENST00000645495|RDX;ENSG00000147065|ENST00000360270|MSN;ENST00000476189.1_1_6:159209469-159239197:-|nuORF;MSN|p.P297Afs*2|1|0.34|ENSG00000147065|chrX:65735356-65735357|-/A|frameshift_variant;nc|ENSG00000137710|P35241-3|RDX;nc|ENSG00000137710|P35241-5|RDX;RDX|p.F45Lfs*6|1|0.23|ENSG00000137710|chr11:110264836-110264836|A/-|frameshift_variant;RDX|p.G213Efs*6|1|0.09|ENSG00000137710|chr11:110257829-110257829|T/-|frameshift_variant	51.19269402634007	0.2889735674168909	2				NaN	NaN	0	NaN	2141	2597	4736
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4741	17.048	NaN	9601.5	30	0	1077.4	0.106	+			22711	KVAPAPAVVKK	11	72	554.365524024019	1106.716495114838	2	554.3665771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KVAPAPAVVKK_	ENSG00000148303|ENST00000323345|RPL7A;ENST00000424041.1_1_20:36073469-36073910:-|nuORF;ENST00000463740.5_1_9:136215098-136217195:+|nuORF	115.23196543181992	0.02934640941715571	2				NaN	NaN	0	NaN	2142	2597	4736
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4742	17.05	NaN	5002.3	30	0	881.62	0.106	+			27292	MGPKGRTV	8	57	423.2363212584208	844.4580895836416	2	423.2386169433594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MGPKGRTV_	ENSG00000144381|ENST00000388968|HSPD1;ENST00000388967.3_1_3:36809324-36810203:-|nuORF;ENST00000461097.1_1_2:198361816-198363572:-|nuORF;ENST00000476746.5_1_2:198360008-198364584:-|nuORF;ENST00000511127.1_1_4:145766891-145766990:+|nuORF;HSPD1|p.G441Vfs*14|1|0.04|ENSG00000144381|chr2:197488385-197488385|C/-|frameshift_variant;nc|ENSG00000144381|P10809-2|HSPD1	64.20726635412375	0.4601301477144759	2				NaN	NaN	0	NaN	2143	2597	4736
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4743	17.052	NaN	7792.5	30	0	2816.2	0.037				-1	SAIEAMKNAH	10	62	363.1779065497826	1086.5118902495478	3	363.17803955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_SAIEAM(Oxidation (M))KNAH_	ENSG00000133030|ENST00000651222|MPRIP;nc|ENSG00000133030|Q6WCQ1-2|MPRIP;nc|ENSG00000133030|Q6WCQ1-3|MPRIP;nc|ENSG00000133030|Q6WCQ1|MPRIP	29.170058357718403	0.6416167986984785	2				NaN	NaN	0	NaN	2144	2597	4736
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4757	17.082	NaN	28387	30	0	4210.5	0.215				-1	 	0	84	501.7761427748524	1001.5377326165049	2	501.7764587402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2155	2600	4756
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4758	17.085	NaN	91296	30	0	32832	0.106				-1	 	0	89	338.8814105837131	1013.6224023513394	3	338.88165283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2156	2600	4756
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4759	17.087	NaN	3595.6	30	0	600	0.106			+	21583	KPHNRISP	8	60	474.7712599247948	947.5279669163896	2	474.7713928222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KPHNRISP_	REV__ENSG00000226690|ENST00000636804|unknown;REV__nc|nan|A0A1B0GVB3-2|C7orf78	40.5726180659479	0.6527593143185008	2				NaN	NaN	0	NaN	2157	2600	4756
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4760	17.089	NaN	5370.7	30	0	579.38	0.106				-1	AACAGSRPLTV	11	60	368.1947613292724	1101.5624545880173	3	368.1951904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_AAC(Carbamidomethyl (C))AGSRPLTV_	ENST00000533620.5_1_11:120169092-120189098:+|nuORF	39.873155843976775	0.5596786644756743	2				NaN	NaN	0	NaN	2158	2600	4756
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4761	17.091	NaN	5583.3	30	0	1161.8	0.106				-1	 	0	67	448.2108519488225	894.407150964445	2	448.2109069824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2159	2600	4756
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4762	17.093	NaN	97018	30	0	19038	0.038	+			36203	SELLLYSSHQ	10	95	392.8679487814152	1175.5820169444455	3	392.8683776855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SELLLYSSHQ_	ENSG00000152332|ENST00000489294|UHMK1;nc|ENSG00000152332|Q8TAS1-2|UHMK1;nc|ENSG00000152332|Q8TAS1-3|UHMK1	72.87924865735499	0.25379688738724415	2				NaN	NaN	0	NaN	2160	2600	4756
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4763	17.093	NaN	3535.5	30	0	683.21	0.138	+			7998	DTGSHSVAQ	9	63	451.2036167629196	900.3926805926392	2	451.2039489746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DTGSHSVAQ_	AluJb_dup87692|chr12:125798275-125798456:-|1.5878392036766538|0.000958979254526|10.69|371.0|11|1|anti-sense	39.252832667884924	0.4290233611298554	2				NaN	NaN	0	NaN	2161	2600	4756
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4778	17.127	NaN	33988	30	0	10903	0.214				-1	 	0	81	374.56038923886786	1120.6593383168035	3	374.5606994628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2173	2603	4777
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4779	17.131	NaN	18783	30	0	4393.2	0.106	+			14367	GTAEPGGSMK	10	75	467.71793723256576	933.4213215319315	2	467.71832275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTAEPGGSMK_	ENSG00000183963|ENST00000333137|SMTN;ENST00000460658.5_1_22:31484094-31491444:+|nuORF;ENST00000489337.5_1_22:31484532-31494796:+|nuORF;nc|ENSG00000183963|P53814-6|SMTN;nc|ENSG00000183963|P53814|SMTN;SMTN|p.S536Vfs*33|1|0.33|ENSG00000183963|chr22:31091813-31091813|C/-|frameshift_variant	120.30596017624542	0.026897611020491978	2				NaN	NaN	0	NaN	2174	2603	4777
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4780	17.133	NaN	5142.3	30	0	935.38	0.106			+	50330	WTVLLNPNLG	10	56	376.2144300554424	1125.6214607665272	3	376.21435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_WTVLLNPNLG_	REV__ENST00000502875.1_1_4:141566092-141566329:-|nuORF	21.68575002086885	0.7027366847906487	2				NaN	NaN	0	NaN	2175	2603	4777
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4781	17.134	NaN	12446	30	0	4522.7	0.106	+			49156	VVMGKQQSKLK	11	54	415.9157527864312	1244.7254289594937	3	415.9163513183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVMGKQQSKLK_	ENSG00000148225|ENST00000374193|WDR31;nc|ENSG00000148225|Q8NA23-2|WDR31	35.17822180527639	0.6208003396870814	2				NaN	NaN	0	NaN	2176	2603	4777
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4782	17.136	NaN	19578	30	0	6996.8	0.106				-1	 	0	85	475.74251353736184	949.4704741415237	2	475.74273681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2177	2603	4777
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4783	17.138	NaN	3919.1	30	0	544.34	0.036			+	13058	GEYTKGKKR	9	46	356.20454047952785	1065.5917920387835	3	356.20489501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GEYTKGKKR_	REV__ENST00000427157.1_1_6:113948832-113971249:-|nuORF	24.20275056022122	0.577060078256802	2				NaN	NaN	0	NaN	2178	2603	4777
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4784	17.139	NaN	16460	30	0	1445.2	0.14				-1	 	0	77	528.7598566330998	1055.5051603329996	2	528.7611083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2179	2603	4777
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4795	17.166	NaN	28028	30	0	11990	0.214				-1	 	0	56	417.23939352476526	832.4642341163305	2	417.2397766113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2187	2606	4794
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4796	17.169	NaN	9783	30	0	1439	0.106	+			42482	TANDANTKY	9	68	499.2324040529939	996.4502551727878	2	499.23248291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TANDANTKY_	ENSG00000149182|ENST00000524782|ARFGAP2;ENST00000395449.7_1_11:47187835-47198404:-|nuORF;ENST00000524727.5_1_11:47194869-47198404:-|nuORF;ENST00000527097.5_1_11:47193699-47198404:-|nuORF;nc|ENSG00000149182|Q8N6H7-2|ARFGAP2	99.78786539795823	0.03941834715970116	2				NaN	NaN	0	NaN	2188	2606	4794
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4797	17.171	NaN	6034.5	30	0	1470.4	0.106			+	33745	RPPREPRRRQ	10	60	449.93284018142487	1346.7766911444746	3	450.26739501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RPPREPRRRQ_	REV__ENST00000302787.2_1_4:1857661-1857766:-|nuORF	32.75053402867276	0.6123771875927935	2				NaN	NaN	0	NaN	2189	2606	4794
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4798	17.173	NaN	12479	30	0	2545.7	0.106			+	43411	TGKFSARGLK	10	64	355.5448672826576	1063.6127724481728	3	355.5450744628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TGKFSARGLK_	REV__ENSG00000163312|ENST00000295488|HELQ;REV__HELQ|p.E864Gfs*7|1|0.07|ENSG00000163312|chr4:83427648-83427649|-/GC|frameshift_variant	49.44154591367651	0.46214596422418036	2				NaN	NaN	0	NaN	2190	2606	4794
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4799	17.175	NaN	6369.7	30	0	1026.7	0.106			+	8461	EASDYTTK	8	65	457.7080878511621	913.4016227691242	2	457.7083435058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EASDYTTK_	REV__CLSPN|p.N242Kfs*21|1|0.1|ENSG00000092853|chr1:35763178-35763179|-/T|frameshift_variant;REV__CLSPN|p.N97Kfs*15|1|0.46|ENSG00000092853|chr1:35764557-35764558|-/T|frameshift_variant;REV__ENSG00000092853|ENST00000318121|CLSPN;REV__nc|ENSG00000092853|Q9HAW4-2|CLSPN;REV__nc|ENSG00000092853|Q9HAW4-3|CLSPN	55.50420428727701	0.5462892107279674	2				NaN	NaN	0	NaN	2191	2606	4794
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4800	17.177	NaN	11663	30	0	3218.4	0.036	+			22515	KTQEIFHSK	9	78	559.303000282752	1116.591447632304	2	559.3038940429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KTQEIFHSK_	ENSG00000108557|ENST00000353383|RAI1;nc|ENSG00000258436|Q7Z5J4-2|RAI1;nc|ENSG00000258436|Q7Z5J4-3|RAI1	218.57678817001025	1.90064538600055E-08	2				NaN	NaN	0	NaN	2192	2606	4794
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4801	17.177	NaN	7101	30	0	1505.9	0.146	+			4633	ATLPNQVHRK	10	49	388.5594899746318	1162.6566405240953	3	388.5595397949219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATLPNQVHRK_	ENSG00000108387|ENST00000672673|SEPTIN4;ENSG00000184702|ENST00000455784|SEPTIN5;ENST00000477238.1_1_22:19707079-19707537:+|nuORF;ENST00000577440.5_1_17:56598198-56609324:-|nuORF;ENST00000584488.5_1_17:56598198-56606616:-|nuORF;nc|ENSG00000108387|O43236-2|SEPTIN4;nc|ENSG00000108387|O43236-3|SEPTIN4;nc|ENSG00000108387|O43236-4|SEPTIN4;nc|ENSG00000108387|O43236-6|SEPTIN4;nc|ENSG00000108387|O43236|SEPTIN4;nc|ENSG00000284874|Q99719-2|SEPTIN5	38.753607047826485	0.5606299674732264	2				NaN	NaN	0	NaN	2193	2606	4794
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4814	17.207	NaN	10879	30	0	4175.3	0.214				-1	 	0	71	373.204473770547	1116.591591911841	3	373.20465087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2203	2609	4813
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4815	17.21	NaN	5606.1	30	0	945.36	0.106	+			22603	KTTKLQLSK	9	68	523.8313571400238	1045.6481613468475	2	523.8321533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTTKLQLSK_	ENSG00000069345|ENST00000317089|DNAJA2	63.69406221917213	0.18282083575345315	2				NaN	NaN	0	NaN	2204	2609	4813
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4816	17.212	NaN	10349	30	0	1601.9	0.106	+			19324	KAHLGTALK	9	67	469.79226182798783	937.5699707227757	2	469.79229736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KAHLGTALK_	ENSG00000186468|ENST00000296674|RPS23;RPS23|p.N39T|1|0.25|ENSG00000186468|chr5:82277741-82277741|T/G|missense_variant	104.01359247289065	0.03510646158778409	2				NaN	NaN	0	NaN	2205	2609	4813
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4817	17.214	NaN	3606.4	30	0	893.81	0.106				-1	 	0	61	565.8233732766963	1129.6321936201925	2	565.82470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2206	2609	4813
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4818	17.216	NaN	1457.6	30	0	89.293	0.106	+			17473	ICQDCGRRK	9	58	539.7660964759223	1077.5176400186444	2	539.7670288085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ICQDCGRRK_	ENSG00000105707|ENST00000672452|HPN	72.2432373244024	0.13108886737667413	2				NaN	NaN	0	NaN	2207	2609	4813
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4819	17.217	NaN	1399.3	30	0	212.83	0.106			+	15271	GTTLRYVTI	9	55	512.2947490138517	1022.5749450945035	2	512.2949829101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTTLRYVTI_	REV__ENST00000538878.5_1_Y:15522901-15560940:-|nuORF	33.921630207806714	0.48623198279849766	2				NaN	NaN	0	NaN	2208	2609	4813
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4820	17.219	NaN	1549.1	30	0	267.74	0.034			+	39125	SSTVQSTVL	9	57	461.24695592301396	920.4793589128279	2	461.2474670410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSTVQSTVL_	REV__ENSG00000181143|ENST00000397910|MUC16;REV__MUC16|p.F10843Sfs*11|1|0.22|ENSG00000181143|chr19:8938427-8938427|A/-|frameshift_variant	47.657333605630114	0.33044192980041115	2				NaN	NaN	0	NaN	2209	2609	4813
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4831	17.245	NaN	33522	30	0	5028.4	0.214				-1	 	0	74	543.7979870352482	1085.5814211372963	2	543.799072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2217	2612	4830
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4832	17.248	NaN	16450	30	0	2890.3	0.106			+	6926	CNAEDSNYQ	9	84	522.1913118099536	1042.3680706867071	2	522.1926879882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_CNAEDSNYQ_	REV__LRP1|p.D3401Y|1|0.24|ENSG00000123384|chr12:57200791-57200791|G/T|missense_variant	58.22992032128504	0.22837015374068087	2				NaN	NaN	0	NaN	2218	2612	4830
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4833	17.25	NaN	8796.9	30	0	3693.8	0.106			+	37132	SITSSPGSK	9	68	432.22657738853115	862.4386018438623	2	432.2269592285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SITSSPGSK_	REV__ENSG00000168658|ENST00000477737|VWA3B;REV__ENST00000409460.5_1_2:98703705-98907168:+|nuORF;REV__nc|ENSG00000168658|Q502W6-2|VWA3B;REV__nc|ENSG00000168658|Q502W6-6|VWA3B;REV__nc|ENSG00000168658|Q502W6-8|VWA3B;REV__VWA3B|p.E2D|1|0.33|ENSG00000168658|chr2:98093098-98093098|G/T|missense_variant;REV__VWA3B|p.V268Ifs*3|1|0.06|ENSG00000168658|chr2:98128336-98128337|-/GATCTCTT|frameshift_variant	54.776311868738084	0.25715957988447635	2				NaN	NaN	0	NaN	2219	2612	4830
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4834	17.252	NaN	5612.4	30	0	1232.1	0.106				-1	ATIMEELADAL	11	41	398.1969266518532	1191.5689505557596	3	398.19732666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_ATIM(Oxidation (M))EELADAL_	ENSG00000178999|ENST00000585124|AURKB;nc|ENSG00000178999|Q96GD4-2|AURKB;nc|ENSG00000178999|Q96GD4-4|AURKB;nc|ENSG00000178999|Q96GD4-5|AURKB	36.31764250033197	0.6083289427130232	2				NaN	NaN	0	NaN	2220	2612	4830
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4835	17.254	NaN	4283.7	30	0	406.5	0.106	+			39342	STCGKCGYPAK	11	75	557.7536737602285	1113.4927945872569	2	557.7550659179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STCGKCGYPAK_	ENSG00000145592|ENST00000274242|RPL37;ENST00000504562.1_1_5:40832608-40835123:-|nuORF;ENST00000507642.5_1_5:40832592-40834660:-|nuORF	84.81729255234993	0.11999117121320589	2				NaN	NaN	0	NaN	2221	2612	4830
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4836	17.256	NaN	5149.5	30	0	709.42	0.035			+	8624	EDAREEER	8	64	517.2303368461093	1032.4461207590184	2	517.2311401367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EDAREEER_	REV__ENST00000489337.5_1_22:31484532-31494796:+|nuORF;REV__ENST00000493335.5_1_22:31492537-31494796:+|nuORF	82.24051045832904	0.30490469762271794	2				NaN	NaN	0	NaN	2222	2612	4830
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4837	17.256	NaN	1848.1	30	0	704.3	0.144			+	43456	TGNELEEQR	9	33	359.17075073959654	1074.4904228189896	3	359.1711730957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TGNELEEQR_	REV__ENSG00000039523|ENST00000042381|RIPOR1;REV__ENST00000569733.6_1_16:67575293-67580037:+|nuORF;REV__nc|ENSG00000039523|Q6ZS17-3|RIPOR1;REV__nc|ENSG00000039523|Q6ZS17-4|RIPOR1;REV__nc|ENSG00000039523|Q6ZS17|RIPOR1	28.081489160057373	0.5408112046645406	2				NaN	NaN	0	NaN	2223	2612	4830
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4848	17.283	NaN	60344	30	0	17044	0.214	+			35153	SAIDKMTKK	9	88	341.194865618941	1020.562767457023	3	341.19512939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAIDKMTKK_	CTNNA1|p.K493Nfs*31|1|0.19|ENSG00000044115|chr5:138917827-138917827|A/-|frameshift_variant;CTNNA1|p.T832*|1|0.29|ENSG00000044115|chr5:138933859-138933862|CAGA/-|frameshift_variant;ENSG00000044115|ENST00000302763|CTNNA1;ENST00000515849.2_1_5:114726864-114727050:-|nuORF;ENST00000517534.5_1_5:138163374-138223382:+|nuORF;nc|ENSG00000044115|P35221-2|CTNNA1	46.45678178249821	0.34452392205506005	2				NaN	NaN	0	NaN	2231	2615	4847
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4849	17.287	NaN	29523	30	0	5590.4	0.106	+			22770	KVFDAKPSAK	10	92	545.8157994141395	1089.617045895079	2	545.8168334960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVFDAKPSAK_	ENSG00000143889|ENST00000449105|HNRNPLL;nc|ENSG00000143889|Q8WVV9-4|HNRNPLL;nc|ENSG00000143889|Q8WVV9-5|HNRNPLL	194.4820724899663	7.3759311393598894E-06	2				NaN	NaN	0	NaN	2232	2615	4847
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4850	17.289	NaN	6220.4	30	0	830.48	0.106	+			46270	VEHETQKL	8	65	492.26002921703054	982.5055055008611	2	492.26129150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VEHETQKL_	ENSG00000065613|ENST00000369755|SLK;ENSG00000072786|ENST00000176763|STK10;ENST00000517360.1_1_5:171471888-171480055:-|nuORF;nc|ENSG00000065613|Q9H2G2-2|SLK	76.7741389293348	0.3504530765139327	2				NaN	NaN	0	NaN	2233	2615	4847
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4851	17.291	NaN	4639.7	30	0	1045.5	0.106				-1	SLSMVTANK	9	64	483.7493924273797	965.4842319215594	2	483.7495422363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_SLSM(Oxidation (M))VTANK_	ENSG00000167861|ENST00000425042|HID1;HID1|p.P773Lfs*8|1|0.17|ENSG00000167861|chr17:74951619-74951619|G/-|frameshift_variant;nc|ENSG00000167861|Q8IV36-2|HID1;nc|ENSG00000167861|Q8IV36-3|HID1	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	2234	2615	4847
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4852	17.293	NaN	6550.5	30	0	3061.9	0.106	+			13546	GLSLLNLGRR	10	42	366.896003255265	1097.666180365995	3	366.896240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GLSLLNLGRR_	ENST00000488949.1_1_20:56884861-56920492:+|nuORF	17.364965105453717	0.7282106878714807	2				NaN	NaN	0	NaN	2235	2615	4847
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4853	17.294	NaN	4489.2	30	0	1828	0.035	+			25988	LSKGFGLATQ	10	64	511.28839563921514	1020.5622383452303	2	511.2891845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSKGFGLATQ_	ENSG00000124574|ENST00000372530|ABCC10;ENST00000463024.1_1_6:43406347-43410920:+|nuORF;nc|ENSG00000124574|Q5T3U5-2|ABCC10	45.02220120713402	0.5028680121232791	2				NaN	NaN	0	NaN	2236	2615	4847
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4854	17.295	NaN	8504.4	30	0	1313.6	0.144			+	7267	DAMSLVEGIVL	11	49	382.8730066350961	NaN	0	382.8730163574219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DAMSLVEGIVL_	REV__ENSG00000153093|ENST00000439055|ACOXL;REV__nc|ENSG00000153093|Q9NUZ1-2|ACOXL;REV__nc|ENSG00000153093|Q9NUZ1-3|ACOXL;REV__nc|ENSG00000153093|Q9NUZ1|ACOXL	30.568863376406313	0.42918353898720446	2				NaN	NaN	0	NaN	2237	2615	4847
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4867	17.324	NaN	5569.9	30	0	780.61	0.214	+			19255	KAEDSARTL	9	73	495.7640226783315	989.513492423463	2	495.7641296386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAEDSARTL_	ENSG00000174989|ENST00000652555|FBXW8;nc|ENSG00000174989|Q8N3Y1-2|FBXW8	109.43880257439609	0.029570636687953285	2				NaN	NaN	0	NaN	2247	2618	4866
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4868	17.328	NaN	2546.9	30	0	237.21	0.106	+			40811	SVEDGQLLT	9	60	481.24502183361966	960.4754907340393	2	481.24517822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVEDGQLLT_	ENSG00000187790|ENST00000267430|FANCM;nc|ENSG00000187790|Q8IYD8-3|FANCM	34.172542307311794	0.4838870758800184	2				NaN	NaN	0	NaN	2248	2618	4866
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4869	17.33	NaN	2527.7	30	0	310.97	0.106	+			30993	QERVQRLK	8	61	528.816394290339	1055.6182356474778	2	528.8179931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QERVQRLK_	ENSG00000187796|ENST00000371732|CARD9;ENST00000556340.1_1_9:139265151-139266545:-|nuORF;nc|ENSG00000289701|Q9H257-2|CARD9;nc|ENSG00000289701|Q9H257-3|CARD9	44.116797842482775	0.6307669463330267	2				NaN	NaN	0	NaN	2249	2618	4866
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4870	17.332	NaN	2458.5	30	0	324.59	0.106	+			20922	KIYDRQVTK	9	62	575.8324287198091	1149.650304506418	2	575.8328857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KIYDRQVTK_	ENSG00000085224|ENST00000373344|ATRX;nc|ENSG00000085224|P46100-2|ATRX;nc|ENSG00000085224|P46100-3|ATRX;nc|ENSG00000085224|P46100-4|ATRX;nc|ENSG00000085224|P46100-5|ATRX	95.4829727501206	0.04940705645337811	2				NaN	NaN	0	NaN	2250	2618	4866
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4871	17.333	NaN	3840.7	30	0	1154.3	0.106	+			27199	MEELKEIIQ	9	58	378.2023527173131	1131.5852287521393	3	378.20245361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MEELKEIIQ_	ENSG00000142945|ENST00000372224|KIF2C;nc|ENSG00000142945|Q99661-2|KIF2C	75.04331003522576	0.118981335847003	2				NaN	NaN	0	NaN	2251	2618	4866
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4872	17.335	NaN	1740.1	30	0	243.11	0.038			+	44646	TTGADPKVFQK	11	38	397.8822937011719	NaN	0	397.8822937011719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TTGADPKVFQK_	REV__ENST00000474733.5_1_7:76911883-76916812:+|nuORF	25.125986553469783	0.45344013546260314	2				NaN	NaN	0	NaN	2252	2618	4866
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4873	17.336	NaN	2315.9	30	0	245.71	0.138			+	24476	LGGKSHPSI	9	50	448.253523703268	894.492494473336	2	448.25299072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LGGKSHPSI_	REV__ENST00000442636.1_1_1:8939783-8939843:+|nuORF	49.44154591367651	0.3095138337212152	2				NaN	NaN	0	NaN	2253	2618	4866
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4887	17.368	NaN	316710	30	0	53429	0.214				-1	 	0	121	466.28158528372563	930.5486176342513	2	466.2822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2264	2621	4886
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4888	17.371	NaN	46822	30	0	15064	0.106	+			383	AASEAGRAM	9	114	432.20528571963666	862.3960185060733	2	432.20574951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AASEAGRAM_	ENSG00000071859|ENST00000393600|FAM50A	98.62937762414208	0.04060045538121712	2				NaN	NaN	0	NaN	2265	2621	4886
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4889	17.373	NaN	14810	30	0	3201.2	0.106	+			9930	EQVKEQVK	8	70	494.27685546875	NaN	0	494.27685546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EQVKEQVK_	ENSG00000162415|ENST00000359600|ZSWIM5	52.936696900407355	1.7418937515398478	2				NaN	NaN	0	NaN	2266	2621	4886
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4890	17.375	NaN	5000.9	30	0	760.02	0.106	+			44375	TSLCKLHF	8	59	474.75301895756303	947.4914849819261	2	474.75341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TSLCKLHF_	LRP1B|p.N3683T|1|0.06|ENSG00000168702|chr2:140364744-140364744|T/G|missense_variant	50.0245360154114	0.5941082100236891	2				NaN	NaN	0	NaN	2267	2621	4886
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4891	17.377	NaN	4967.8	30	0	1205.8	0.106			+	-1	GALLMLIAMGP	11	55	368.2051696777344	NaN	0	368.2051696777344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_GALLMLIAM(Oxidation (M))GP_	REV__ENST00000488337.5_1_11:116714606-116714729:-|nuORF	33.921630207806714	0.41424167740351664	2				NaN	NaN	0	NaN	2268	2621	4886
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4892	17.379	NaN	3634.7	30	0	328.66	0.036	+			20449	KEVEERPAP	9	70	527.7808837890625	NaN	0	527.7808837890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KEVEERPAP_	ENSG00000130429|ENST00000646101|ARPC1B	104.01359247289065	0.015103351932921906	2				NaN	NaN	0	NaN	2269	2621	4886
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4893	17.379	NaN	8651.8	30	0	1937.5	0.144	+			42419	TAKSKPTKKA	10	59	353.888916015625	NaN	0	353.888916015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TAKSKPTKKA_	TRDN|p.P576S|1|0.28|ENSG00000186439|chr6:123269861-123269861|G/A|missense_variant	35.17822180527639	0.3846679649904324	2				NaN	NaN	0	NaN	2270	2621	4886
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4910	17.414	NaN	42124	30	0	11891	0.215	+			15085	GTQGSPITK	9	69	444.7424400068728	887.4703270805456	2	444.7425537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTQGSPITK_	ENSG00000110237|ENST00000263674|ARHGEF17;ENST00000536481.1_1_11:73075528-73075729:+|nuORF	195.04605151776784	5.427472092243166E-05	2				NaN	NaN	0	NaN	2284	2624	4909
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4911	17.417	NaN	25241	30	0	2878	0.038	+			35007	SACHKYFEK	9	97	390.51833266410785	NaN	0	390.51837158203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SAC(Carbamidomethyl (C))HKYFEK_	ENSG00000163993|ENST00000296370|S100P;ENST00000513778.1_1_4:6695618-6698766:+|nuORF;S100P|p.T82M|1|0.3|ENSG00000163993|chr4:6696999-6696999|C/T|missense_variant	81.52500206392136	0.06615817976141032	2				NaN	NaN	0	NaN	2285	2624	4909
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4922	17.441	NaN	28278	30	0	7603.7	0.214				-1	 	0	76	453.74755855106883	905.4805641689377	2	453.7479553222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2293	2627	4921
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4923	17.445	NaN	13412	30	0	4706.2	0.106	+			14690	GTIGKKFAR	9	74	489.2975145306236	976.5804761280472	2	489.2980651855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTIGKKFAR_	ENSG00000135698|ENST00000258169|MPHOSPH6	106.68306549817024	0.032382560583716295	2				NaN	NaN	0	NaN	2294	2627	4921
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4924	17.447	NaN	3913.2	30	0	2057.5	0.106			+	31215	QGSLTRCAPLS	11	60	566.7900637256965	1131.565574518193	2	566.7913818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QGSLTRCAPLS_	REV__PEAR1|p.G784Afs*136|1|0.49|ENSG00000187800|chr1:156912905-156912905|A/-|frameshift_variant	40.05817265558897	0.5571470695993369	2				NaN	NaN	0	NaN	2295	2627	4921
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4925	17.449	NaN	23975	30	0	4970.6	0.106	+			35101	SAGDVAVQK	9	75	437.7347713648261	873.4549897964522	2	437.7350769042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SAGDVAVQK_	ENSG00000164574|ENST00000297107|GALNT10;ENST00000517958.1_1_5:153783698-153796529:+|nuORF;ENST00000520647.5_1_5:153755841-153792087:+|nuORF;nc|ENSG00000164574|Q86SR1-2|GALNT10;nc|ENSG00000164574|Q86SR1-4|GALNT10	129.42129120953632	0.01549634589885217	2				NaN	NaN	0	NaN	2296	2627	4921
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4926	17.451	NaN	4601.1	30	0	844.72	0.106	+			32043	QRSEEKLP	8	59	493.7665170264904	985.5184811197809	2	493.7666320800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QRSEEKLP_	ANK1|p.S1653Y|1|0.25|ENSG00000029534|chr8:41672492-41672492|G/T|missense_variant;ENSG00000029534|ENST00000289734|ANK1;KIAA0146-ANK1|1|fusion;KIAA0146-ANK1|2|fusion;KIAA0146-ANK1|3|fusion;KIAA0146-ANK1|4|fusion;nc|ENSG00000029534|P16157-10|ANK1;nc|ENSG00000029534|P16157-12|ANK1;nc|ENSG00000029534|P16157-14|ANK1;nc|ENSG00000029534|P16157-16|ANK1;nc|ENSG00000029534|P16157-21|ANK1;nc|ENSG00000029534|P16157-5|ANK1;nc|ENSG00000029534|P16157-8|ANK1;nc|ENSG00000029534|P16157|ANK1	60.97194046774394	0.49215940876911696	2				NaN	NaN	0	NaN	2297	2627	4921
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4927	17.452	NaN	2612.5	30	0	198.11	0.035				-1	KNSYRMVV	8	64	506.7684550175079	NaN	0	506.7683410644531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_KNSYRM(Oxidation (M))VV_	ENSG00000100302|ENST00000216127|RASD2	45.9519527083369	1.7418937515398478	2				NaN	NaN	0	NaN	2298	2627	4921
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4928	17.453	NaN	4694.6	30	0	538.17	0.141	+			22992	KVSDPTKLSK	10	70	551.8276547484772	NaN	0	551.8286743164062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KVSDPTKLSK_	ENSG00000067596|ENST00000262415|DHX8	96.66504779109242	0.028658552827671036	2				NaN	NaN	0	NaN	2299	2627	4921
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4941	17.482	NaN	19921	30	0	7318.3	0.214				-1	 	0	70	490.76600179458603	979.5174506559721	2	490.7664489746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2309	2630	4940
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4942	17.486	NaN	18308	30	0	6788.7	0.106				-1	 	0	53	346.51698934892477	1036.5291386469744	3	346.5172119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2310	2630	4940
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4943	17.488	NaN	15521	30	0	1761.9	0.106	+			35979	SEHAVNKQL	9	65	513.2722281988782	1024.5299034645564	2	513.2724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEHAVNKQL_	ENSG00000166595|ENST00000422424|CIAO2B;ENST00000562362.5_1_16:66966108-66968009:-|nuORF	127.46168284122857	0.016682644177004526	2				NaN	NaN	0	NaN	2311	2630	4940
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4944	17.489	NaN	15507	30	0	7202.5	0.106			+	19389	KAMKTNAKA	9	61	481.77569698203996	961.5368410308799	2	481.77606201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KAMKTNAKA_	REV__ENSG00000157110|ENST00000397323|RBPMS;REV__ENSG00000166831|ENST00000300069|RBPMS2;REV__nc|ENSG00000157110|Q93062-2|RBPMS;REV__nc|ENSG00000157110|Q93062-3|RBPMS;REV__nc|ENSG00000157110|Q93062-4|RBPMS;REV__nc|ENSG00000157110|Q93062-5|RBPMS	49.44154591367651	0.3095138337212152	2				NaN	NaN	0	NaN	2312	2630	4940
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4945	17.491	NaN	8112.7	30	0	1800.5	0.106	+			1527	AGARLDVRD	9	62	486.7643560838497	NaN	0	486.7643127441406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AGARLDVRD_	ENSG00000147883|ENST00000276925|CDKN2B;ENSG00000147889|ENST00000304494|CDKN2A;ENST00000380142.4_1_9:22005988-22008700:-|nuORF;nc|ENSG00000147889|P42771-2|CDKN2A;nc|ENSG00000147889|P42771-4|CDKN2A	27.882242232435846	0.3367954786602879	2				NaN	NaN	0	NaN	2313	2630	4940
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4946	17.493	NaN	3934.6	30	0	990.53	0.106	+			8879	EESINFKFRK	10	53	433.2343755414824	NaN	0	433.234619140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EESINFKFRK_	KIF15|p.K1251Nfs*11|1|0.08|ENSG00000163808|chr3:44848041-44848042|-/TTTCAAATTC|frameshift_variant	38.753607047826485	0.3729281687199363	2				NaN	NaN	0	NaN	2314	2630	4940
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4947	17.495	NaN	8029.6	30	0	1693.6	0.038	+			13518	GLPVNISDAYQ	11	56	392.8679487814152	1175.5820169444455	3	392.8681945800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GLPVNISDAYQ_	ENSG00000128655|ENST00000286063|PDE11A;ENST00000497003.5_1_2:178552959-178791632:-|nuORF;nc|ENSG00000128655|Q9HCR9-2|PDE11A;nc|ENSG00000128655|Q9HCR9-3|PDE11A;nc|ENSG00000128655|Q9HCR9-4|PDE11A	41.080066990542036	0.5431644350485484	2				NaN	NaN	0	NaN	2315	2630	4940
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4959	17.521	NaN	33782	30	0	11860	0.214	+			20127	KEKLSKSE	8	80	474.77125520152606	947.5279574698521	2	474.77142333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEKLSKSE_	CASP8AP2|p.D1810Mfs*3|1|0.43|ENSG00000118412|chr6:89868711-89868711|A/-|frameshift_variant;CASP8AP2|p.E1628Mfs*58|1|0.49|ENSG00000118412|chr6:89868163-89868164|-/AT|frameshift_variant;CASP8AP2|p.N1236Ifs*9|1|0.3|ENSG00000118412|chr6:89866990-89866990|A/-|frameshift_variant;CASP8AP2|p.N1917Kfs*4|1|0.24|ENSG00000118412|chr6:89869034-89869035|-/A|frameshift_variant;ENSG00000118412|ENST00000551025|CASP8AP2;ENST00000237177.10_1_6:90556308-90583533:+|nuORF;nc|ENSG00000118412|Q9UKL3|CASP8AP2	110.11987700582712	0.24509564897437786	2				NaN	NaN	0	NaN	2324	2633	4958
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4960	17.524	NaN	5930.9	30	0	808.85	0.106	+			33812	RQSCVMVQK	9	77	568.2882342124146	1134.5619154916292	2	568.2896118164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_RQSC(Carbamidomethyl (C))VMVQK_	ENSG00000128833|ENST00000261839|MYO5C;ENST00000558902.5_1_15:52529812-52548856:-|nuORF;ENST00000560809.5_1_15:52532054-52548856:-|nuORF;MYO5C|p.E1050Sfs*8|1|0.32|ENSG00000128833|chr15:52229192-52229192|C/-|frameshift_variant;MYO5C|p.L1151Wfs*19|1|0.17|ENSG00000128833|chr15:52223719-52223719|A/-|frameshift_variant;MYO5C|p.L933Hfs*33|1|0.04|ENSG00000128833|chr15:52237552-52237553|-/T|frameshift_variant;MYO5C|p.L933Sfs*35|1|0.04|ENSG00000128833|chr15:52237553-52237554|-/AAGTGGA|frameshift_variant	87.69643885390035	0.07135982304947239	2				NaN	NaN	0	NaN	2325	2633	4958
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4961	17.526	NaN	4034.9	30	0	1102.9	0.106	+			43382	TGFPCIFLRL	10	45	389.55161516516046	1165.6330160956813	3	389.55194091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TGFPCIFLRL_	ENST00000462770.5_1_3:133661447-133748739:-|nuORF	28.081489160057373	0.6505064946289502	2				NaN	NaN	0	NaN	2326	2633	4958
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4962	17.528	NaN	4830.4	30	0	2025.1	0.106	+			30544	QAKQESTEY	9	66	542.250659236604	1082.4867655400078	2	542.2516479492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QAKQESTEY_	ENSG00000026025|ENST00000544301|VIM;ENST00000421459.2_2_10:17272631-17276850:+|nuORF;VIM|p.R310C|1|0.13|ENSG00000026025|chr10:17234738-17234738|C/T|missense_variant	85.86182877749512	0.07653218437724067	2				NaN	NaN	0	NaN	2327	2633	4958
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4963	17.53	NaN	6378.6	30	0	1410.4	0.106			+	42529	TAQVDLQPQV	10	55	366.8642064294062	1097.5707898884186	3	366.8644104003906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TAQVDLQPQV_	REV__ENSG00000144182|ENST00000651691|LIPT1;REV__LIPT1|p.I369Nfs*2|1|0.26|ENSG00000144182|chr2:99163056-99163057|-/A|frameshift_variant	23.52269567125451	0.6877354443478558	2				NaN	NaN	0	NaN	2328	2633	4958
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4964	17.532	NaN	6730.6	30	0	843.4	0.038	+			34677	RVSNVKSVYK	10	69	393.8992531399556	1178.6759300200667	3	393.8996887207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RVSNVKSVYK_	ENSG00000104738|ENST00000649973|MCM4;MCM4|p.T629Qfs*18|2|0.31|ENSG00000104738|chr8:47971419-47971419|A/-|frameshift_variant	49.46582953369473	0.46192220282894864	2				NaN	NaN	0	NaN	2329	2633	4958
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4965	17.532	NaN	8251.7	30	0	2542	0.143	+			32138	QSLTVGITVWD	11	55	406.8836440949797	1217.629102885139	3	406.8840026855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QSLTVGITVWD_	nc|ENSG00000196188|P14091-2|CTSE	30.568863376406313	0.6691487505135859	2				NaN	NaN	0	NaN	2330	2633	4958
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4978	17.562	NaN	18912	30	0	2707.9	0.214	+			38279	SQQKVVITK	9	83	515.8159447165978	1029.6173364999954	2	515.8165893554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SQQKVVITK_	ENSG00000007952|ENST00000372966|NOX1;ENSG00000165168|ENST00000378588|CYBB;nc|ENSG00000007952|Q9Y5S8-3|NOX1;NOX1|p.R290H|1|0.17|ENSG00000007952|chrX:100851261-100851261|C/T|missense_variant	150.81021883065287	0.006680279908938716	2				NaN	NaN	0	NaN	2340	2636	4977
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4979	17.565	NaN	23432	30	0	9171.6	0.106	+			14460	GTCASWRGK	9	49	341.4989649032118	1021.4750653098354	3	341.49932861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GTC(Carbamidomethyl (C))ASWRGK_	ENSG00000265972|ENST00000582401|TXNIP;ENST00000488537.1_1_1:145440216-145440639:+|nuORF;nc|ENSG00000265972|Q9H3M7-2|TXNIP	47.657333605630114	0.33044192980041115	2				NaN	NaN	0	NaN	2341	2636	4977
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4980	17.567	NaN	10942	30	0	1002.3	0.106			+	31829	QPRDYRRS	8	83	539.2803881246298	1076.5462233160595	2	539.28125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QPRDYRRS_	REV__ENSG00000128578|ENST00000249344|STRIP2	40.5726180659479	0.6527593143185008	2				NaN	NaN	0	NaN	2342	2636	4977
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4981	17.569	NaN	17121	30	0	3322.8	0.106				-1	 	0	65	397.5398746286006	1189.597794486002	3	397.54022216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2343	2636	4977
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4982	17.571	NaN	4478	30	0	971.76	0.106	+			45244	TVQEKTFNK	9	51	365.5325167278768	1093.5757207838303	3	365.5327453613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TVQEKTFNK_	ENSG00000163104|ENST00000354268|SMARCAD1;nc|ENSG00000163104|Q9H4L7-2|SMARCAD1;SMARCAD1|p.K230Rfs*28|1|0.26|ENSG00000163104|chr4:94240985-94240985|A/-|frameshift_variant;SMARCAD1|p.K734Qfs*6|1|0.31|ENSG00000163104|chr4:94278630-94278631|-/C|frameshift_variant	31.529811441608018	0.5085848003137583	2				NaN	NaN	0	NaN	2344	2636	4977
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4983	17.572	NaN	34876	30	0	6078.7	0.036	+			22096	KSMNANTITK	10	81	554.2941034169725	1106.5736539007448	2	554.29541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KSMNANTITK_	ENSG00000175467|ENST00000312397|SART1	181.87364410229196	0.0010491195229426484	2				NaN	NaN	0	NaN	2345	2636	4977
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4984	17.573	NaN	13139	30	0	4152.1	0.143				-1	CRAAEGRGGA	10	65	335.4953771821468	1003.4643021466404	3	335.4959716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_C(Carbamidomethyl (C))RAAEGRGGA_	ENST00000587962.6_1_19:2233841-2234202:-|nuORF	46.45678178249821	0.4896490706773647	2				NaN	NaN	0	NaN	2346	2636	4977
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4996	17.6	NaN	20088	30	0	4527.1	0.214	+			37405	SLGGHSISK	9	75	443.24257978733664	884.4706066414733	2	443.24285888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLGGHSISK_	ENSG00000189144|ENST00000536220|ZNF573;ZNF573|p.V65L|1|0.4|ENSG00000189144|chr19:37771573-37771573|C/A|missense_variant	154.1183686248401	0.005909203230691971	2				NaN	NaN	0	NaN	2355	2639	4995
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4997	17.604	NaN	13494	30	0	1239.3	0.106			+	7066	CVAKVLMKK	9	84	345.8731328902123	1034.5975692708369	3	345.87335205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_CVAKVLM(Oxidation (M))KK_	REV__ENSG00000278685|ENST00000615129|IQCA1L	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	2356	2639	4995
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4998	17.606	NaN	45401	30	0	15073	0.106	+			4256	ATGESIAVKK	10	74	335.19732409127687	1002.5701428740306	3	335.1975402832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATGESIAVKK_	DCLRE1C|p.R685Efs*6|1|0.37|ENSG00000152457|chr10:14908434-14908434|T/-|frameshift_variant;ENSG00000152457|ENST00000378278|DCLRE1C;nc|ENSG00000152457|Q96SD1-2|DCLRE1C;nc|ENSG00000152457|Q96SD1-3|DCLRE1C	59.93077597824379	0.36646980200755325	2				NaN	NaN	0	NaN	2357	2639	4995
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4999	17.608	NaN	8363.6	30	0	3933.6	0.106	+			34338	RTPPPPSRK	9	71	518.3060797028926	1034.597606472585	2	518.3068237304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RTPPPPSRK_	ENSG00000141068|ENST00000644974|KSR1;ENST00000579399.1_1_17:25904538-25912767:+|nuORF;nc|ENSG00000141068|Q8IVT5-2|KSR1;nc|ENSG00000141068|Q8IVT5-3|KSR1;nc|ENSG00000141068|Q8IVT5-4|KSR1;nc|ENSG00000141068|Q8IVT5|KSR1	49.44154591367651	0.3095138337212152	2				NaN	NaN	0	NaN	2358	2639	4995
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5000	17.61	NaN	27381	30	0	4654.7	0.106			+	50370	WVVAQGSQAG	10	89	501.7556998863457	1001.4968468394915	2	501.75531005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_WVVAQGSQAG_	REV__ENST00000473391.1_1_7:150067498-150067537:+|nuORF	63.53385203322761	0.33370026130094593	2				NaN	NaN	0	NaN	2359	2639	4995
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5001	17.611	NaN	16012	30	0	2084.4	0.036	+			50248	WPPWSRMT	8	85	538.7532178236291	1075.4918827140582	2	538.7543334960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_WPPWSRM(Oxidation (M))T_	TMC6|p.Y488Tfs*67|1|0.39|ENSG00000141524|chr17:78121087-78121087|G/-|frameshift_variant	47.91560031466742	0.6071945918984287	2				NaN	NaN	0	NaN	2360	2639	4995
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5002	17.612	NaN	7227.6	30	0	3027	0.145	+			43572	TIDERAINKK	10	56	396.5626062300055	1186.6659892902164	3	396.56298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TIDERAINKK_	ENSG00000102024|ENST00000355899|PLS3;ENSG00000120756|ENST00000457734|PLS1;nc|ENSG00000102024|P13797-2|PLS3;nc|ENSG00000102024|P13797-3|PLS3	33.921630207806714	0.6028135429846169	2				NaN	NaN	0	NaN	2361	2639	4995
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5014	17.64	NaN	8360.9	30	0	1007.1	0.214				-1	 	0	70	466.28158528372563	930.5486176342513	2	466.78033447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2370	2642	5013
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5015	17.644	NaN	25915	30	0	3658.5	0.106	+			44615	TTEGRNALIHK	11	79	413.898203170855	NaN	0	413.89837646484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTEGRNALIHK_	DHX9|p.L1065Cfs*20|1|0.41|ENSG00000135829|chr1:182883563-182883563|C/-|frameshift_variant;ENSG00000135829|ENST00000367549|DHX9;ENST00000485081.5_1_1:182847108-182856566:+|nuORF	65.46538089061403	0.1803543755190073	2				NaN	NaN	0	NaN	2371	2642	5013
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5016	17.646	NaN	8238.4	30	0	5261.3	0.106	+			32185	QSSTLTRHT	9	61	515.7669922248332	1029.5194315164663	2	515.7677612304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QSSTLTRHT_	ENSG00000167232|ENST00000300619|ZNF91;nc|ENSG00000167232|Q05481-2|ZNF91	66.42927471994793	0.16001998865088202	2				NaN	NaN	0	NaN	2372	2642	5013
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5017	17.648	NaN	11827	30	0	2055	0.106	+			44793	TTQRPLHINK	10	72	403.23469314099657	1206.6822500231897	3	403.235107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TTQRPLHINK_	CACNA1C|p.A2072Pfs*18|1|0.55|ENSG00000151067|chr12:2688729-2688729|G/-|frameshift_variant;CACNA1C|p.P2073Qfs*17|1|0.21|ENSG00000151067|chr12:2688733-2688733|C/-|frameshift_variant;ENSG00000151067|ENST00000399655|CACNA1C;nc|ENSG00000151067|Q13936-10|CACNA1C;nc|ENSG00000151067|Q13936-11|CACNA1C;nc|ENSG00000151067|Q13936-13|CACNA1C;nc|ENSG00000151067|Q13936-14|CACNA1C;nc|ENSG00000151067|Q13936-15|CACNA1C;nc|ENSG00000151067|Q13936-16|CACNA1C;nc|ENSG00000151067|Q13936-17|CACNA1C;nc|ENSG00000151067|Q13936-18|CACNA1C;nc|ENSG00000151067|Q13936-19|CACNA1C;nc|ENSG00000151067|Q13936-2|CACNA1C;nc|ENSG00000151067|Q13936-20|CACNA1C;nc|ENSG00000151067|Q13936-21|CACNA1C;nc|ENSG00000151067|Q13936-22|CACNA1C;nc|ENSG00000151067|Q13936-23|CACNA1C;nc|ENSG00000151067|Q13936-24|CACNA1C;nc|ENSG00000151067|Q13936-25|CACNA1C;nc|ENSG00000151067|Q13936-26|CACNA1C;nc|ENSG00000151067|Q13936-27|CACNA1C;nc|ENSG00000151067|Q13936-28|CACNA1C;nc|ENSG00000151067|Q13936-29|CACNA1C;nc|ENSG00000151067|Q13936-3|CACNA1C;nc|ENSG00000151067|Q13936-30|CACNA1C;nc|ENSG00000151067|Q13936-31|CACNA1C;nc|ENSG00000151067|Q13936-32|CACNA1C;nc|ENSG00000151067|Q13936-33|CACNA1C;nc|ENSG00000151067|Q13936-34|CACNA1C;nc|ENSG00000151067|Q13936-35|CACNA1C;nc|ENSG00000151067|Q13936-36|CACNA1C;nc|ENSG00000151067|Q13936-37|CACNA1C;nc|ENSG00000151067|Q13936-4|CACNA1C;nc|ENSG00000151067|Q13936-5|CACNA1C;nc|ENSG00000151067|Q13936-6|CACNA1C;nc|ENSG00000151067|Q13936-7|CACNA1C;nc|ENSG00000151067|Q13936-8|CACNA1C;nc|ENSG00000151067|Q13936-9|CACNA1C;nc|ENSG00000151067|Q13936|CACNA1C	45.02220120713402	0.5028680121232791	2				NaN	NaN	0	NaN	2373	2642	5013
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5018	17.65	NaN	3770.5	30	0	394.39	0.106	+			31137	QGEITKER	8	63	480.75841013035006	959.5022673275001	2	480.7591247558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QGEITKER_	ENSG00000165671|ENST00000439151|NSD1;nc|ENSG00000165671|Q96L73-2|NSD1;nc|ENSG00000165671|Q96L73-3|NSD1	60.11826168202944	0.5006107059937851	2				NaN	NaN	0	NaN	2374	2642	5013
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5019	17.651	NaN	3964	30	0	964.29	0.106	+			14135	GSMGSFSEK	9	58	473.20245650019046	944.390360067181	2	473.2026672363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_GSM(Oxidation (M))GSFSEK_	EMC1|p.F608Lfs*7|1|0.38|ENSG00000127463|chr1:19231381-19231381|A/-|frameshift_variant;EMC1|p.F974Lfs*4|1|0.22|ENSG00000127463|chr1:19219363-19219363|A/-|frameshift_variant;ENSG00000127463|ENST00000477853|EMC1;nc|ENSG00000127463|Q8N766-2|EMC1;nc|ENSG00000127463|Q8N766-3|EMC1;nc|ENSG00000127463|Q8N766-4|EMC1	40.05817265558897	0.419577045485086	2				NaN	NaN	0	NaN	2375	2642	5013
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5020	17.653	NaN	3290.3	30	0	423.46	0.037	+			9639	ELRQARFLL	9	46	382.5642603687539	1144.6709517064617	3	382.5646667480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ELRQARFLL_	ENSG00000128815|ENST00000325239|WDFY4;nc|ENSG00000128815|Q6ZS81-4|WDFY4;nc|ENSG00000128815|Q6ZS81-5|WDFY4	49.44154591367651	0.3095138337212152	2				NaN	NaN	0	NaN	2376	2642	5013
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5031	17.679	NaN	37088	30	0	11201	0.214	+			6419	AVVRMKRARK	10	99	405.59268759297925	1213.7562333791377	3	405.5931091308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVVRMKRARK_	ENST00000423945.5_1_7:72300234-72302185:+|nuORF;ENST00000437201.5_1_7:72300234-72301326:+|nuORF;ENST00000456312.5_1_7:72300234-72300363:+|nuORF	28.081489160057373	0.6505064946289502	2				NaN	NaN	0	NaN	2384	2645	5030
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5032	17.682	NaN	7428	30	0	679.38	0.106	+			30872	QEKCLRPE	8	76	501.7556998863457	1001.4968468394915	2	501.7636413574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QEKCLRPE_	ENSG00000068654|ENST00000263857|POLR1A	56.72105179125745	0.5342425954139568	2				NaN	NaN	0	NaN	2385	2645	5030
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5033	17.684	NaN	23973	30	0	4928.8	0.106	+			22337	KTGEVLDTK	9	75	495.77646470049376	989.5383764677875	2	495.776611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KTGEVLDTK_	ENSG00000196937|ENST00000359943|FAM3C	122.93914200107957	0.019420478173996256	2				NaN	NaN	0	NaN	2386	2645	5030
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5034	17.686	NaN	9794.1	30	0	2606.4	0.106	+			5339	ATVPQASK	8	61	401.22653079631664	800.4385086594333	2	401.226806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATVPQASK_	ENSG00000196531|ENST00000454682|NACA	110.11987700582712	0.24509564897437786	2				NaN	NaN	0	NaN	2387	2645	5030
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5035	17.688	NaN	2119.6	30	0	189.67	0.106	+			34349	RTQEEIVAK	9	56	537.3005819477712	1072.5866109623423	2	537.3015747070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RTQEEIVAK_	ENSG00000155660|ENST00000652332|PDIA4	66.96192283764107	0.15557981141143568	2				NaN	NaN	0	NaN	2388	2645	5030
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5036	17.69	NaN	4704.4	30	0	1476	0.036			+	2112	ALGRGRLSLE	10	38	357.88020837262275	1070.6187957180682	3	357.8805236816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ALGRGRLSLE_	REV__ENST00000433465.1_1_21:46713271-46716280:+|nuORF	24.20275056022122	0.6821818413321409	2				NaN	NaN	0	NaN	2389	2645	5030
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5037	17.69	NaN	13227	30	0	1844.4	0.14				-1	 	0	76	527.2601011830219	1052.5056494328437	2	527.2614135742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2390	2645	5030
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5049	17.718	NaN	56638	30	0	15115	0.194				-1	 	0	98	466.28158528372563	930.5486176342513	2	466.2818603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2399	2648	5048
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5050	17.721	NaN	43017	30	0	10867	0.106			+	20511	KFGSSVSEGA	10	74	484.7392336584044	NaN	0	484.7392578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KFGSSVSEGA_	REV__ENSG00000142609|ENST00000682832|CFAP74;REV__ENST00000412120.2_1_1:1853728-1858343:-|nuORF;REV__ENST00000464311.5_1_1:1853728-1858229:-|nuORF;REV__nc|ENSG00000142609|Q9C0B2|CFAP74	77.31757898189308	0.11266207027252037	2				NaN	NaN	0	NaN	2400	2648	5048
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5051	17.723	NaN	7503.8	30	0	965.33	0.106			+	12439	GEATPIHP	8	63	411.2107688857708	820.4069848383416	2	411.2110900878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEATPIHP_	REV__ENST00000477553.1_1_9:124091151-124091454:+|nuORF	52.29916861842294	0.578018602984656	2				NaN	NaN	0	NaN	2401	2648	5048
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5052	17.725	NaN	16022	30	0	4403	0.106				-1	 	0	66	543.3005036605354	1084.5864543878706	2	543.301513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2402	2648	5048
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5053	17.726	NaN	22878	30	0	4981	0.106	+			5521	AVAHALTEK	9	86	470.2662493175378	938.5179457018756	2	470.2662658691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVAHALTEK_	ENSG00000163468|ENST00000295688|CCT3;nc|ENSG00000163468|P49368-2|CCT3	148.98678547993487	0.0071052929883181565	2				NaN	NaN	0	NaN	2403	2648	5048
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5054	17.728	NaN	9920.8	30	0	3102.4	0.106	+			6321	AVTDQTVSK	9	66	474.7528986212366	947.4912443092733	2	474.7530822753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AVTDQTVSK_	COIL|p.N162Tfs*47|1|0.22|ENSG00000121058|chr17:56950757-56950757|T/-|frameshift_variant;ENSG00000121058|ENST00000240316|COIL	84.81729255234993	0.07947707105691067	2				NaN	NaN	0	NaN	2404	2648	5048
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5055	17.73	NaN	10724	30	0	1264.6	0.034			+	38548	SSETKGNIQ	9	72	482.2404082240991	962.4662635149982	2	482.2404479980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSETKGNIQ_	REV__ENSG00000146247|ENST00000275034|PHIP;REV__ENST00000479165.1_1_6:79650412-79665440:-|nuORF	107.00750918261382	0.032051501805654005	2				NaN	NaN	0	NaN	2405	2648	5048
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5067	17.756	NaN	137980	30	0	22025	0.214			+	38234	SQLFGQSLLDP	11	102	402.2117525317349	1203.6134281954046	3	402.212158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SQLFGQSLLDP_	REV__ENSG00000178171|ENST00000321420|AMER3	61.76455937419982	0.30770400073182314	2				NaN	NaN	0	NaN	2414	2651	5066
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5068	17.759	NaN	14338	30	0	3584.7	0.106	+			49175	VVMRDPNTK	9	69	530.2834153748089	1058.5522778164177	2	530.2847900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVMRDPNTK_	chr12:54282662-54282800|482|460.96|0.0|25.46|+|ENST00000677249|HNRNPA1,HNRNPA1;ENSG00000135486|ENST00000340913|HNRNPA1;ENSG00000139675|ENST00000357495|HNRNPA1L2;ENSG00000224578|ENST00000565308|HNRNPA1L3;ENST00000441603.1_1_11:5593122-5593311:-|nuORF;ENST00000452488.1_1_2:41383770-41384067:+|nuORF;ENST00000457695.2_1_X:100110922-100111255:-|nuORF;ENST00000575692.1_1_17:2210089-2210875:+|nuORF;nc|ENSG00000135486|P09651-2|HNRNPA1;nc|ENSG00000135486|P09651-3|HNRNPA1	99.01295224348159	0.040209060045561164	2				NaN	NaN	0	NaN	2415	2651	5066
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5069	17.761	NaN	4783.5	30	0	1491.7	0.106	+			17234	HVLGKRREL	9	43	369.89596854837237	1106.666076245317	3	369.89617919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HVLGKRREL_	ENSG00000127831|ENST00000248444|VIL1;nc|ENSG00000127831|P09327-2|VIL1	21.9598887501803	0.5980208138527809	2				NaN	NaN	0	NaN	2416	2651	5066
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5070	17.763	NaN	9610.7	30	0	4932.5	0.106	+			30320	PTQMGLRISG	10	46	353.858294957023	1058.553055471269	3	353.85870361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PTQMGLRISG_	nc|ENSG00000139405|Q96K30-2|RITA1	30.568863376406313	0.6301935916953115	2				NaN	NaN	0	NaN	2417	2651	5066
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5071	17.765	NaN	4130.8	30	0	1625.8	0.106			+	28939	NRPSLEPSF	9	56	523.7665798846837	1045.5186068361672	2	523.7670288085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NRPSLEPSF_	REV__ENSG00000143303|ENST00000368216|METTL25B;REV__PRCC-RRNAD1|2|fusion	35.61828744233558	0.47037581924408073	2				NaN	NaN	0	NaN	2418	2651	5066
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5072	17.767	NaN	3511.8	30	0	517.41	0.036				-1	MGICWEPRA	9	64	539.7429474228912	NaN	0	539.3126220703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_M(Oxidation (M))GICWEPRA_	ENST00000477980.6_1_X:100878297-100878528:+|nuORF	44.116797842482775	0.2472372736944149	2				NaN	NaN	0	NaN	2419	2651	5066
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5073	17.767	NaN	28844	30	0	11513	0.145				-1	 	0	65	379.21177093654046	1134.6134834098214	3	379.2120666503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2420	2651	5066
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5087	17.798	NaN	44940	30	0	25769	0.211			+	7753	DNLLFEETNQD	11	84	669.2966510478824	1336.5787491625647	2	669.2952270507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DNLLFEETNQD_	REV__CPED1|p.H927Tfs*4|2|0.25|ENSG00000106034|chr7:121271333-121271334|-/A|frameshift_variant;REV__ENSG00000106034|ENST00000310396|CPED1;REV__nc|ENSG00000106034|A4D0V7-2|CPED1	79.48907831485694	0.15663227531959176	2				NaN	NaN	0	NaN	2431	2654	5086
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5088	17.802	NaN	21885	30	0	3000.7	0.106				-1	NGWTCDCRLRG	11	79	446.5323785410884	NaN	0	446.5323181152344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_NGWTCDC(Carbamidomethyl (C))RLRG_	ENSG00000255690|ENST00000539664|TRIL;TRIL|p.G796Afs*4|1|0.12|ENSG00000255690|chr7:28955660-28955660|C/-|frameshift_variant	39.873155843976775	0.387718248623866	2				NaN	NaN	0	NaN	2432	2654	5086
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5089	17.803	NaN	6885	30	0	1952.8	0.106	+			4053	ATDGTFSSK	9	57	457.2161787955012	912.4178046578024	2	457.2164001464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATDGTFSSK_	ENSG00000083857|ENST00000441802|FAT1;FAT1|p.N3847Yfs*7|1|0.03|ENSG00000083857|chr4:186601370-186601371|-/TTATA|frameshift_variant;FAT1|p.P3228Lfs*42|1|0.27|ENSG00000083857|chr4:186611556-186611556|G/-|frameshift_variant;FAT1|p.P4313Lfs*36|1|0.34|ENSG00000083857|chr4:186596602-186596602|G/-|frameshift_variant	141.52041321563706	0.009766778904176347	2				NaN	NaN	0	NaN	2433	2654	5086
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5090	17.805	NaN	6882.4	30	0	1969.9	0.106	+			41868	SVTGVTASK	9	57	425.2369634174773	848.4593739017546	2	425.23724365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVTGVTASK_	ENSG00000153046|ENST00000397588|CDYL;ENST00000472453.5_1_6:4776866-4954287:+|nuORF;nc|ENSG00000153046|Q9Y232-3|CDYL;nc|ENSG00000153046|Q9Y232-4|CDYL;nc|ENSG00000153046|Q9Y232|CDYL	58.2462437865262	0.22823408064396822	2				NaN	NaN	0	NaN	2434	2654	5086
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5091	17.807	NaN	3494.8	30	0	404.03	0.106	+			40343	STTHLMTGK	9	65	488.2497664074364	974.4849798816729	2	488.2499084472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STTHLMTGK_	ENSG00000138688|ENST00000679879|BLTP1;nc|ENSG00000138688|Q2LD37-4|BLTP1;nc|ENSG00000138688|Q2LD37-7|BLTP1;nc|ENSG00000138688|Q2LD37|BLTP1	72.87924865735499	0.12833875048249987	2				NaN	NaN	0	NaN	2435	2654	5086
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5092	17.809	NaN	2544.7	30	0	772.58	0.106	+			36800	SIDLPRRKK	9	49	371.56768017669316	1111.6812111302795	3	371.56817626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SIDLPRRKK_	ENSG00000135913|ENST00000258399|USP37;nc|ENSG00000135913|Q86T82-2|USP37	19.1035232394073	0.6112419832031293	2				NaN	NaN	0	NaN	2436	2654	5086
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5093	17.811	NaN	7064.6	30	0	2431.4	0.035	+			11788	FSPDLLGLQ	9	61	495.2693254574604	988.5240979817208	2	495.2692565917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FSPDLLGLQ_	ENSG00000167645|ENST00000339413|YIF1B;ENST00000585563.5_1_19:38798235-38806107:-|nuORF;ENST00000586319.5_1_19:38798235-38799736:-|nuORF;ENST00000589644.1_1_19:38798235-38799514:-|nuORF;nc|ENSG00000167645|Q5BJH7-2|YIF1B;nc|ENSG00000167645|Q5BJH7-3|YIF1B;nc|ENSG00000167645|Q5BJH7-4|YIF1B;nc|ENSG00000167645|Q5BJH7-5|YIF1B;nc|ENSG00000167645|Q5BJH7-6|YIF1B	51.33545320467046	0.2872990594074956	2				NaN	NaN	0	NaN	2437	2654	5086
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5106	17.837	NaN	9290	30	0	1411.1	0.214	+			19994	KEIEGVTKT	9	65	502.78446150489884	1003.5543700765977	2	502.7848205566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEIEGVTKT_	ENSG00000131558|ENST00000253861|EXOC4	168.25843898104137	0.0030641937004078144	2				NaN	NaN	0	NaN	2447	2657	5105
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5107	17.841	NaN	25193	30	0	15066	0.106	+			6462	AVYGQNDIHHK	11	64	427.8821422142861	1280.6245972430584	3	427.88238525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVYGQNDIHHK_	ENSG00000138757|ENST00000359707|G3BP2;nc|ENSG00000138757|Q9UN86-2|G3BP2	35.17822180527639	0.6208003396870814	2				NaN	NaN	0	NaN	2448	2657	5105
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5108	17.843	NaN	2780.6	30	0	252.37	0.106	+			30809	QECPIKEVV	9	61	522.7742862341302	1043.5340195350602	2	522.7753295898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QECPIKEVV_	ENSG00000136261|ENST00000258761|BZW2	36.446750945000026	0.4619375763483977	2				NaN	NaN	0	NaN	2449	2657	5105
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5109	17.845	NaN	49430	30	0	10778	0.106				-1	 	0	94	405.24645295728044	1212.7175294720414	3	405.24676513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2450	2657	5105
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5110	17.847	NaN	9083.6	30	0	1852.4	0.106	+			8527	EAVCVRGAG	9	69	431.21560597774305	860.4166590222861	2	431.21624755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EAVCVRGAG_	ENST00000310862.11_1_13:45985504-45985891:-|nuORF;ENST00000519676.5_1_13:45985504-45992464:-|nuORF	45.9519527083369	0.35044536499095585	2				NaN	NaN	0	NaN	2451	2657	5105
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5111	17.848	NaN	1789.3	30	0	228.16	0.036			+	32393	QVDFSVPEIG	10	56	545.7736206054688	NaN	0	545.7736206054688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QVDFSVPEIG_	REV__ENSG00000167778|ENST00000301463|SPRYD3	37.15910966729921	0.3781637092648983	2				NaN	NaN	0	NaN	2452	2657	5105
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5112	17.849	NaN	9909.7	30	0	982.86	0.145			+	-1	QMIVDRPCGA	10	76	369.1755026114579	1104.5046784345736	3	369.1758117675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_QM(Oxidation (M))IVDRPCGA_	REV__ENST00000222122.9_1_19:49133840-49134074:-|nuORF	28.081489160057373	0.6505064946289502	2				NaN	NaN	0	NaN	2453	2657	5105
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5124	17.876	NaN	54167	30	0	10271	0.214	+			38263	SQNTDMVQK	9	99	525.7482449626209	NaN	0	525.748046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SQNTDMVQK_	ENSG00000113282|ENST00000411809|CLINT1	164.45504665044191	0.014275169813657222	2				NaN	NaN	0	NaN	2462	2660	5123
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5125	17.88	NaN	11500	30	0	3392.1	0.106	+			47249	VMRDPNTK	8	62	480.7498227842724	959.4850926353448	2	480.7499694824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VMRDPNTK_	chr12:54281896-54283827|481|161.31|0.0|23.94|+|ENST00000679273|HNRNPA1,HNRNPA1;chr12:54281908-54283827|478|50.47|0.0|22.27|+|ENST00000678448|HNRNPA1,HNRNPA1;chr12:54281941-54282052|473|46.5|0.0|22.15|+|ENST00000676842|HNRNPA1,HNRNPA1;chr12:54281945-54282090|465|21.34|0.0|21.03|+|ENST00000550994|HNRNPA1,HNRNPA1;chr12:54282662-54282800|482|460.96|0.0|25.46|+|ENST00000677249|HNRNPA1,HNRNPA1;ENSG00000135486|ENST00000340913|HNRNPA1;ENSG00000139675|ENST00000357495|HNRNPA1L2;ENSG00000224578|ENST00000565308|HNRNPA1L3;ENST00000391992.3_1_12:9181361-9181625:-|nuORF;ENST00000412087.2_1_X:100143133-100143544:-|nuORF;ENST00000441603.1_1_11:5593122-5593311:-|nuORF;ENST00000452488.1_1_2:41383770-41384067:+|nuORF;ENST00000457695.2_1_X:100110922-100111255:-|nuORF;ENST00000575692.1_1_17:2210089-2210875:+|nuORF;nc|ENSG00000135486|P09651-2|HNRNPA1;nc|ENSG00000135486|P09651-3|HNRNPA1	90.60085204095205	0.2756512185673585	2				NaN	NaN	0	NaN	2463	2660	5123
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5126	17.882	NaN	5536.6	30	0	1003.9	0.106	+			28140	NAKGKDAIM	9	62	474.2524745026713	NaN	0	474.25244140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NAKGKDAIM_	ENSG00000116266|ENST00000370008|STXBP3;STXBP3|p.N527Kfs*17|1|0.2|ENSG00000116266|chr1:108807439-108807440|-/A|frameshift_variant;STXBP3|p.V566Lfs*3|1|0.52|ENSG00000116266|chr1:108808792-108808793|-/TT|frameshift_variant	52.936696900407355	0.1864545979552969	2				NaN	NaN	0	NaN	2464	2660	5123
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5127	17.884	NaN	21385	30	0	2328.1	0.106	+			43091	TENPHGARL	9	88	497.7562933258647	993.4980337185294	2	497.7566833496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TENPHGARL_	ENSG00000243725|ENST00000371281|TTC4	82.7504851949679	0.08565546331141553	2				NaN	NaN	0	NaN	2465	2660	5123
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5128	17.886	NaN	5288.7	30	0	2167.1	0.106			+	-1	NDMKKAHEECL	11	60	458.8760046756511	1373.6061846271532	3	458.8763122558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_NDMKKAHEEC(Carbamidomethyl (C))L_	REV__ENSG00000114933|ENST00000403263|INO80D;REV__INO80D|p.V883Gfs*2|1|0.31|ENSG00000114933|chr2:206004804-206004804|A/-|frameshift_variant	21.780426970141523	0.7613322811393133	2				NaN	NaN	0	NaN	2466	2660	5123
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5129	17.887	NaN	2225	30	0	159.61	0.106	+			29646	PGLAARGA	8	47	356.70818602256657	711.4018191119332	2	356.70855712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PGLAARGA_	ENST00000375749.7_1_20:30822509-30822659:+|nuORF	42.47446043378293	0.6409579893742323	2				NaN	NaN	0	NaN	2467	2660	5123
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5130	17.889	NaN	3265	30	0	524.95	0.035	+			43151	TESSKATNVC	10	67	520.2399229503728	1038.4652929675456	2	520.239990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TESSKATNVC_	ENSG00000153147|ENST00000283131|SMARCA5	50.033510581677724	0.4566913063131936	2				NaN	NaN	0	NaN	2468	2660	5123
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5145	17.92	NaN	132280	30	0	16912	0.149	+			3713	ATAASSSSLEK	11	98	526.2662802849466	1050.518007636693	2	526.2674560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATAASSSSLEK_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENST00000417985.1_1_X:46147855-46148119:-|nuORF;ENST00000418987.2_1_9:103493819-103494230:+|nuORF;ENST00000423183.1_1_3:12112396-12112453:+|nuORF;ENST00000450451.1_1_1:238090483-238090852:+|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2	173.2355992304161	1.9516618874335084E-05	2				NaN	NaN	0	NaN	2480	2663	5144
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5146	17.923	NaN	10764	30	0	1090.5	0.106				-1	 	0	74	412.7345449316352	823.4545369300704	2	412.7350158691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2481	2663	5144
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5147	17.925	NaN	15754	30	0	1869.1	0.106	+			34322	RTNEVVAIKK	10	75	386.5712337663649	1156.6918718992947	3	386.571533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RTNEVVAIKK_	ENSG00000160551|ENST00000261716|TAOK1;nc|ENSG00000160551|Q7L7X3-3|TAOK1;TAOK1-VMP1|1|fusion	72.2432373244024	0.2589930451692646	2				NaN	NaN	0	NaN	2482	2663	5144
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5148	17.927	NaN	9728.7	30	0	1904.5	0.106	+			40017	STMSTSCAR	9	68	472.2019915416878	942.3894301501756	2	472.20208740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STMSTSCAR_	ENST00000282388.3_2_2:43452860-43453537:-|nuORF	56.43379154798735	0.2433427591689151	2				NaN	NaN	0	NaN	2483	2663	5144
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5149	17.929	NaN	4095.6	30	0	451.85	0.106	+			3564	ASTRTIFKK	9	52	351.2132249465925	1050.6178454399776	3	351.21343994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASTRTIFKK_	ENSG00000111445|ENST00000454402|RFC5;nc|ENSG00000111445|P40937-2|RFC5	29.170058357718403	0.5306379469863586	2				NaN	NaN	0	NaN	2484	2663	5144
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5150	17.93	NaN	3001.4	30	0	437.65	0.106	+			20972	KKENNGVLKK	10	60	579.3534831174909	1156.6924133017817	2	579.3543090820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KKENNGVLKK_	DCAF8L1|p.R449Gfs*6|1|0.34|ENSG00000226372|chrX:27979990-27979990|G/-|frameshift_variant;DCAF8L2|p.F411L|1|0.37|ENSG00000189186|chrX:27748128-27748128|C/A|missense_variant;DCAF8L2|p.V527Cfs*7|1|0.39|ENSG00000189186|chrX:27748474-27748474|G/-|frameshift_variant;ENSG00000189186|ENST00000451261|DCAF8L2;ENSG00000226372|ENST00000441525|DCAF8L1	112.41091882917199	0.040839805697094264	2				NaN	NaN	0	NaN	2485	2663	5144
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5151	17.932	NaN	3045.5	30	0	670.34	0.033	+			26481	LTLNNGKL	8	53	436.7635498046875	NaN	0	436.7635498046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LTLNNGKL_	ENSG00000177853|ENST00000316045|ZNF518A;nc|ENSG00000177853|Q6AHZ1-2|ZNF518A;ZNF518A|p.I1254Nfs*11|1|0.18|ENSG00000177853|chr10:96160075-96160076|-/A|frameshift_variant;ZNF518A|p.L1107Ffs*8|1|0.31|ENSG00000177853|chr10:96159635-96159636|-/T|frameshift_variant	35.61828744233558	1.7418937515398478	2				NaN	NaN	0	NaN	2486	2663	5144
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5169	17.969	NaN	108890	30	0	40007	0.197				-1	 	0	73	343.8887381804262	1028.6443851414786	3	343.8890075683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2501	2666	5168
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5170	17.972	NaN	19560	30	0	5521.6	0.106	+			22583	KTSTVFSSK	9	77	492.7710734214825	983.5275939097651	2	492.7714538574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTSTVFSSK_	nc|ENSG00000196275|Q86UP8-4|GTF2IRD2	150.81021883065287	0.006680279908938716	2				NaN	NaN	0	NaN	2502	2666	5168
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5171	17.974	NaN	19962	30	0	8726.9	0.106				-1	 	0	60	418.22907266204464	834.4435923908893	2	418.2294616699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2503	2666	5168
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5172	17.976	NaN	82949	30	0	30010	0.106	+			3258	ASLGSCFAEIR	11	72	385.19434888775504	1152.561217263465	3	385.19488525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASLGSCFAEIR_	ENSG00000180592|ENST00000449193|SKIDA1;nc|ENSG00000180592|Q1XH10-2|SKIDA1	51.52775601994872	0.4002081502334604	2				NaN	NaN	0	NaN	2504	2666	5168
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5173	17.978	NaN	169750	30	0	38433	0.106	+			19420	KAPSAARSL	9	125	450.7659656429159	899.5173783526318	2	450.766357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KAPSAARSL_	ENSG00000083937|ENST00000263780|CHMP2B;ENST00000466696.1_1_3:87302513-87302969:+|nuORF;nc|ENSG00000083937|Q9UQN3-2|CHMP2B	58.22992032128504	0.22837015374068087	2				NaN	NaN	0	NaN	2505	2666	5168
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5174	17.979	NaN	19934	30	0	10376	0.106			+	32811	RAVNEHEVQ	9	73	541.2731984977197	1080.5318440622393	2	541.2740478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RAVNEHEVQ_	REV__ENST00000426627.1_1_13:88543904-88544189:-|nuORF	79.71258880314673	0.09879134589249085	2				NaN	NaN	0	NaN	2506	2666	5168
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5175	17.981	NaN	8600.3	30	0	3628.5	0.038				-1	CGVRPVPRGEG	11	53	395.2068637465062	NaN	0	395.2068786621094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_C(Carbamidomethyl (C))GVRPVPRGEG_	ENST00000574951.5_1_17:4871308-4871557:-|nuORF	24.231819034082204	0.456735970842152	2				NaN	NaN	0	NaN	2507	2666	5168
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5193	18.019	NaN	172290	30	0	15376	0.163	+			15427	GTYRDANIK	9	90	519.2718228509812	1036.5290927687622	2	519.2725219726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTYRDANIK_	ENSG00000112531|ENST00000361752|QKI;nc|ENSG00000112531|Q96PU8-3|QKI;nc|ENSG00000112531|Q96PU8-5|QKI;nc|ENSG00000112531|Q96PU8-6|QKI;nc|ENSG00000112531|Q96PU8-8|QKI;nc|ENSG00000112531|Q96PU8-9|QKI	96.66504779109242	0.04607440320619715	2				NaN	NaN	0	NaN	2522	2669	5192
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5194	18.022	NaN	18605	30	0	5668.4	0.106	+			22307	KTETPIVSK	9	77	501.7943658874351	1001.5741788416702	2	501.79486083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTETPIVSK_	ENSG00000124164|ENST00000475243|VAPB;ENST00000463370.5_1_20:57007450-57019288:+|nuORF;ENST00000476395.1_1_20:57015848-57019288:+|nuORF	133.9934435666947	0.013297982075521412	2				NaN	NaN	0	NaN	2523	2669	5192
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5195	18.024	NaN	45606	30	0	9742.1	0.106	+			34196	RTDEAAFQK	9	92	533.2689227001886	1064.523292467177	2	533.2699584960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RTDEAAFQK_	ENSG00000196154|ENST00000368716|S100A4	72.2432373244024	0.13108886737667413	2				NaN	NaN	0	NaN	2524	2669	5192
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5196	18.026	NaN	17035	30	0	3937.2	0.106				-1	 	0	69	461.23482797242013	920.4551030116403	2	461.23516845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2525	2669	5192
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5197	18.027	NaN	10828	30	0	1380.9	0.106	+			17402	IAQDHRSSL	9	70	513.7713093066501	1025.5280656801	2	513.7700805664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IAQDHRSSL_	ARHGEF10|p.E997Gfs*16|1|0.43|ENSG00000104728|chr8:1928644-1928644|A/-|frameshift_variant;ARHGEF10|p.P976Rfs*8|1|0.14|ENSG00000104728|chr8:1928577-1928577|C/-|frameshift_variant;ENSG00000104728|ENST00000349830|ARHGEF10;ENST00000523711.5_1_8:1824717-1874701:+|nuORF;nc|ENSG00000104728|O15013-4|ARHGEF10;nc|ENSG00000104728|O15013-6|ARHGEF10;nc|ENSG00000104728|O15013-7|ARHGEF10;nc|ENSG00000104728|O15013|ARHGEF10	81.52500206392136	0.09095445986635249	2				NaN	NaN	0	NaN	2526	2669	5192
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5198	18.029	NaN	9362.6	30	0	1036.4	0.106			+	32860	RDALKSLQ	8	72	465.7718555849414	929.5291582366829	2	465.7716369628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RDALKSLQ_	REV__ENSG00000109756|ENST00000691494|RAPGEF2;REV__nc|ENSG00000109756|Q9Y4G8|RAPGEF2	74.25504064058377	0.37144338840759816	2				NaN	NaN	0	NaN	2527	2669	5192
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5199	18.031	NaN	12059	30	0	2921.9	0.033	+			4293	ATGGWSSSK	9	81	440.71131888966886	879.4080848461377	2	440.7113952636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATGGWSSSK_	BAHD1|p.P431Lfs*16|1|0.42|ENSG00000140320|chr15:40459754-40459754|C/-|frameshift_variant;ENSG00000140320|ENST00000416165|BAHD1;nc|ENSG00000140320|Q8TBE0-2|BAHD1;nc|ENSG00000140320|Q8TBE0-3|BAHD1	91.26522074875469	0.06129826844580791	2				NaN	NaN	0	NaN	2528	2669	5192
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5213	18.06	NaN	171290	30	0	41727	0.147	+			48899	VVDNGSGMCK	10	90	533.735183666802	1065.4558144004038	2	533.7365112304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_VVDNGSGMC(Carbamidomethyl (C))K_	ACTBL2|p.R29Gfs*7|1|0.37|ENSG00000169067|chr5:57482623-57482623|G/-|frameshift_variant;ENSG00000075624|ENST00000646664|ACTB;ENSG00000169067|ENST00000423391|ACTBL2;ENST00000418351.1_1_15:44282253-44282364:-|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000477812.1_1_7:5569027-5569288:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF	142.36107225718385	0.01012457621782354	2				NaN	NaN	0	NaN	2539	2672	5212
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5214	18.063	NaN	18524	30	0	4987.4	0.04	+			3118	ASGSTTFTK	9	78	450.22680386782736	898.4390548024547	2	450.2268371582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASGSTTFTK_	ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1670Tfs*23|1|0.29|ENSG00000174231|chr17:1659487-1659487|C/-|frameshift_variant	106.68306549817024	0.032382560583716295	2				NaN	NaN	0	NaN	2540	2672	5212
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5215	18.064	NaN	94701	30	0	16497	0.106			+	19448	KARELNPIK	9	76	534.8292889400377	1067.6440249468753	2	534.8308715820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KARELNPIK_	REV__ENSG00000066135|ENST00000372396|KDM4A;REV__nc|ENSG00000066135|O75164-2|KDM4A	52.936696900407355	0.27249468807391813	2				NaN	NaN	0	NaN	2541	2672	5212
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5216	18.066	NaN	86410	30	0	9715.6	0.106	+			34366	RTQNVLGEK	9	100	522.7924951256283	1043.5704373180565	2	522.7935180664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RTQNVLGEK_	ENSG00000149273|ENST00000531188|RPS3;ENST00000407940.1_1_6:7339375-7339741:-|nuORF;ENST00000529173.5_1_11:75110591-75112804:+|nuORF;nc|ENSG00000149273|P23396-2|RPS3	144.76815839617436	0.008243131458242323	2				NaN	NaN	0	NaN	2542	2672	5212
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5217	18.068	NaN	8353.6	30	0	1272.2	0.106			+	37427	SLGSIKEQV	9	67	480.7711903728523	959.5278278125046	2	480.7713928222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SLGSIKEQV_	REV__ENSG00000163312|ENST00000295488|HELQ;REV__HELQ|p.E864Gfs*7|1|0.07|ENSG00000163312|chr4:83427648-83427649|-/GC|frameshift_variant;REV__HELQ|p.F782Lfs*9|1|0.13|ENSG00000163312|chr4:83429696-83429696|A/-|frameshift_variant;REV__HELQ|p.K561Rfs*8|1|0.45|ENSG00000163312|chr4:83439989-83439989|T/-|frameshift_variant	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	2543	2672	5212
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5218	18.07	NaN	1529.9	30	0	224.06	0.106	+			18732	ITHAVVIKK	9	50	336.89016013891455	1007.6486510169436	3	336.89031982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ITHAVVIKK_	ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;ENST00000565932.5_1_16:28734455-28746831:+|nuORF;nc|ENSG00000184110|Q99613-2|EIF3C	52.936696900407355	0.27249468807391813	2				NaN	NaN	0	NaN	2544	2672	5212
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5219	18.072	NaN	16463	30	0	3826.3	0.041			+	17590	IEEMYQRESPM	11	53	706.8130272136241	1411.611501494048	2	706.811279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IEEMYQRESPM_	REV__AXDND1|p.N583Vfs*2|1|0.1|ENSG00000162779|chr1:179445152-179445153|-/GTCT|frameshift_variant;REV__ENSG00000162779|ENST00000367618|AXDND1;REV__ENST00000461179.2_1_1:179339175-179437601:+|nuORF;REV__nc|ENSG00000162779|Q5T1B0-2|AXDND1	41.42661286455405	0.5384226294179143	2				NaN	NaN	0	NaN	2545	2672	5212
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5220	18.072	NaN	48540	30	0	20668	0.147				-1	 	0	97	414.56257939115704	1240.6659087736712	3	414.5632019042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2546	2672	5212
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5236	18.108	NaN	13923	30	0	4334.7	0.214	+			4109	ATDYGTIKK	9	42	332.8497114229799	995.5273048691397	3	332.85009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATDYGTIKK_	ENSG00000112902|ENST00000382496|SEMA5A	30.317721548370564	0.5199124245378496	2				NaN	NaN	0	NaN	2559	2675	5235
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5237	18.111	NaN	20403	30	0	4830.6	0.106	+			32753	RAQDLPLKK	9	60	356.8879112949087	1067.641904484926	3	356.8889465332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RAQDLPLKK_	ENSG00000139641|ENST00000394048|ESYT1	60.11826168202944	0.21262886028301267	2				NaN	NaN	0	NaN	2560	2675	5235
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5238	18.113	NaN	13462	30	0	1201	0.106	+			32754	RAQDLPLKK	9	87	534.8292889400377	1067.6440249468753	2	535.837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RAQDLPLKK_	ENSG00000139641|ENST00000394048|ESYT1	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	2561	2675	5235
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5239	18.115	NaN	21666	30	0	5297.9	0.106			+	9326	EIGNEQHTHYQ	11	64	678.3019736959383	1354.5893944586765	2	678.3001708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EIGNEQHTHYQ_	REV__ENSG00000163659|ENST00000295924|TIPARP;REV__TIPARP|p.I342Tfs*25|1|0.42|ENSG00000163659|chr3:156694125-156694128|TATT/-|frameshift_variant	33.921630207806714	0.6339809607503234	2				NaN	NaN	0	NaN	2562	2675	5235
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5240	18.117	NaN	39856	30	0	5916.1	0.106			+	29426	PCCTTMTWIRS	11	91	452.5353366742876	1354.5841806230628	3	452.5357360839844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_PCC(Carbamidomethyl (C))TTMTWIRS_	REV__CIB4|p.E150Pfs*29|1|0.13|ENSG00000157884|chr2:26582904-26582905|-/GCTTTGGG|frameshift_variant	45.908116695636124	0.4771019740774998	2				NaN	NaN	0	NaN	2563	2675	5235
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5241	18.119	NaN	11115	30	0	3514.6	0.033	+			4276	ATGGMANVK	9	64	424.7180912138767	NaN	0	424.7181396484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATGGMANVK_	ENSG00000136936|ENST00000375128|XPA;XPA|p.A65T|1|0.24|ENSG00000136936|chr9:97693739-97693739|C/T|missense_variant	127.46168284122857	0.0009793558177450096	2				NaN	NaN	0	NaN	2564	2675	5235
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5242	18.119	NaN	16903	30	0	3668.7	0.143	+			22155	KSRNCIVDGR	10	70	402.2117525317349	1203.6134281954046	3	402.21234130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_KSRNC(Carbamidomethyl (C))IVDGR_	ENSG00000132518|ENST00000254854|GUCY2D	51.52775601994872	0.4429225830406686	2				NaN	NaN	0	NaN	2565	2675	5235
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5257	18.152	NaN	23188	30	0	7185.1	0.214	+			4824	ATNYITRNK	9	55	360.8643775268333	1079.5713031807	3	360.86468505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATNYITRNK_	ENSG00000100029|ENST00000354694|PES1;ENST00000466614.1_1_22:30983271-30987820:-|nuORF;nc|ENSG00000100029|O00541-2|PES1	25.57405402267927	0.5642445186134241	2				NaN	NaN	0	NaN	2577	2678	5256
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5258	18.156	NaN	22856	30	0	9999.2	0.106	+			14243	GSSSVAAMK	9	54	419.2095973872597	836.4046418413194	2	419.210205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSSSVAAMK_	ENSG00000174021|ENST00000370645|GNG5;GNG5-NMI|1|fusion	148.04295825190792	0.0073252839830139265	2				NaN	NaN	0	NaN	2578	2678	5256
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5259	18.158	NaN	13162	30	0	2685.2	0.106			+	44043	TPPPTATS	8	58	386.1972715182544	770.3799901033088	2	386.1977233886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TPPPTATS_	REV__ENSG00000143442|ENST00000271715|POGZ;REV__nc|ENSG00000143442|Q7Z3K3-2|POGZ;REV__nc|ENSG00000143442|Q7Z3K3-3|POGZ;REV__nc|ENSG00000143442|Q7Z3K3-5|POGZ;REV__nc|ENSG00000143442|Q7Z3K3-6|POGZ;REV__nc|ENSG00000143442|Q7Z3K3-7|POGZ;REV__POGZ|p.E1016Rfs*3|1|0.42|ENSG00000143442|chr1:151405989-151405989|C/-|frameshift_variant	42.47446043378293	0.6409579893742323	2				NaN	NaN	0	NaN	2579	2678	5256
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5260	18.159	NaN	7197.3	30	0	804.55	0.106	+			40501	STYKEAFRK	9	58	377.20468454261055	1128.5922242280317	3	377.2048034667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STYKEAFRK_	ENSG00000163344|ENST00000368467|PMVK	37.81151784470057	0.4459294069877048	2				NaN	NaN	0	NaN	2580	2678	5256
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5261	18.161	NaN	5822.6	30	0	1863.3	0.106				-1	 	0	61	496.29207756960164	990.5696022060033	2	496.29248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2581	2678	5256
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5262	18.163	NaN	3919.8	30	0	467.62	0.035	+			22825	KVGEFSGANK	10	65	518.7746996972969	NaN	0	518.774658203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KVGEFSGANK_	ENSG00000136810|ENST00000374517|TXN;ENST00000487892.1_1_9:113006439-113007258:-|nuORF;ENST00000510190.1_1_4:77880016-77880280:-|nuORF;nc|ENSG00000136810|P10599-2|TXN	59.93077597824379	0.23484348948204886	2				NaN	NaN	0	NaN	2582	2678	5256
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5263	18.164	NaN	8135.4	30	0	1240.7	0.145	+			11546	FPHSAHQKY	9	70	372.1853457194496	1113.5342077585487	3	372.1857604980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FPHSAHQKY_	ENSG00000188846|ENST00000396203|RPL14;ENST00000481798.1_1_3:40499446-40503006:+|nuORF	39.252832667884924	0.4290233611298554	2				NaN	NaN	0	NaN	2583	2678	5256
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5276	18.192	NaN	35707	30	0	6440.3	0.214				-1	 	0	70	463.7319856729947	925.4494184127894	2	463.7322082519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2593	2681	5275
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5277	18.195	NaN	12156	30	0	2501.6	0.106	+			15112	GTQSDKVTLK	10	78	538.7997693470669	1075.5849857609337	2	538.80126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTQSDKVTLK_	ENSG00000115677|ENST00000310931|HDLBP;ENST00000479169.5_1_2:242177863-242181895:-|nuORF;ENST00000483086.1_1_2:242174984-242179130:-|nuORF;ENST00000487169.5_1_2:242174673-242189369:-|nuORF;nc|ENSG00000115677|Q00341-2|HDLBP	147.73206827945663	0.008898223230177705	2				NaN	NaN	0	NaN	2594	2681	5275
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5278	18.197	NaN	15670	30	0	1456	0.106			+	35530	SAVKAGRY	8	77	426.23957428426263	850.4645956353253	2	426.2402038574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAVKAGRY_	REV__ENSG00000125522|ENST00000684052|NPBWR2	40.5726180659479	0.6527593143185008	2				NaN	NaN	0	NaN	2595	2681	5275
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5279	18.199	NaN	3612.5	30	0	636.67	0.106	+			48383	VTHQSVGVVK	10	66	527.3054007795099	1052.5962486258197	2	527.3064575195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTHQSVGVVK_	ENSG00000128731|ENST00000261609|HERC2;ENST00000529624.5_3_15:28916682-28918849:+|nuORF;ENST00000567869.1_1_15:28436080-28447805:-|nuORF	55.08391021199286	0.41055145962533396	2				NaN	NaN	0	NaN	2596	2681	5275
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5280	18.201	NaN	16585	30	0	2135.8	0.106	+			24693	LHCKADNIRQQ	11	70	442.56230219231327	1324.66507717714	3	442.5627136230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LHCKADNIRQQ_	ENSG00000146263|ENST00000683635|MMS22L;ENST00000508820.1_1_6:97720576-97730353:-|nuORF;ENST00000508976.5_1_6:97702357-97730353:-|nuORF;ENST00000511335.5_1_6:97715738-97720957:-|nuORF;MMS22L|p.K389Sfs*10|1|0.09|ENSG00000146263|chr6:97246644-97246644|T/-|frameshift_variant;MMS22L|p.V934Ffs*8|1|0.2|ENSG00000146263|chr6:97173103-97173103|T/-|frameshift_variant	31.068146907933308	0.6639116734509778	2				NaN	NaN	0	NaN	2597	2681	5275
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5281	18.202	NaN	3263	30	0	809.76	0.036	+			33469	RISHWTATK	9	69	550.3030631364473	1098.5915733396946	2	550.3042602539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RISHWTATK_	ENST00000337451.7_1_15:23034209-23034353:-|nuORF	109.47833844074708	0.029530294723441826	2				NaN	NaN	0	NaN	2598	2681	5275
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5282	18.203	NaN	7029.1	30	0	1609.7	0.14			+	38959	SSRELAEL	8	61	452.739785693516	903.465018453832	2	452.74005126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSRELAEL_	REV__ENSG00000108469|ENST00000317905|RECQL5;REV__ENST00000443199.6_1_17:73623504-73629591:-|nuORF;REV__nc|ENSG00000108469|O94762-4|RECQL5	66.42927471994793	0.4381325844043345	2				NaN	NaN	0	NaN	2599	2681	5275
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5294	18.232	NaN	770000	30	0	267310	0.158	+			4068	ATDKSFVEK	9	126	512.7687783786243	1023.5230038240487	2	512.7691040039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATDKSFVEK_	ENSG00000100345|ENST00000216181|MYH9;ENSG00000105357|ENST00000642316|MYH14;ENSG00000133392|ENST00000300036|MYH11;MYH14|p.L1950Sfs*14|1|0.34|ENSG00000105357|chr19:50309646-50309646|C/-|frameshift_variant;MYH14|p.M997*|1|0.19|ENSG00000105357|chr19:50271483-50271483|A/-|frameshift_variant;MYH14|p.R929Gfs*44|1|0.38|ENSG00000105357|chr19:50268237-50268237|G/-|frameshift_variant;MYH9|p.I784*|1|0.07|ENSG00000100345|chr22:36304036-36304036|G/-|frameshift_variant;nc|ENSG00000100345|P35579-2|MYH9;nc|ENSG00000105357|Q7Z406-4|MYH14;nc|ENSG00000105357|Q7Z406-5|MYH14;nc|ENSG00000105357|Q7Z406-6|MYH14;nc|ENSG00000105357|Q7Z406|MYH14;nc|ENSG00000133392|P35749-2|MYH11;nc|ENSG00000133392|P35749-3|MYH11;nc|ENSG00000133392|P35749-4|MYH11	182.3913890336628	0.0010559746847940753	2				NaN	NaN	0	NaN	2608	2684	5293
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5295	18.234	NaN	57607	30	0	18639	0.106	+			44047	TPQFQLRPS	9	85	537.2909396923751	1072.5673264515501	2	537.2925415039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TPQFQLRPS_	ENSG00000203786|ENST00000606109|KPRP;KPRP|p.P340Hfs*31|1|0.22|ENSG00000203786|chr1:152760603-152760603|C/-|frameshift_variant	81.52500206392136	0.09095445986635249	2				NaN	NaN	0	NaN	2609	2684	5293
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5296	18.236	NaN	15117	30	0	3555.9	0.106				-1	 	0	56	383.56397106302126	1147.6700837892638	3	383.5643005371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2610	2684	5293
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5297	18.238	NaN	8977	30	0	5988.3	0.106	+			1880	AILTRTTDI	9	39	335.19733557174584	1002.5701773154376	3	335.1975402832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AILTRTTDI_	ENST00000526551.5_1_11:124746819-124748211:+|nuORF	34.172542307311794	0.4838870758800184	2				NaN	NaN	0	NaN	2611	2684	5293
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5298	18.24	NaN	10963	30	0	1655	0.106			+	20808	KIELSSSH	8	79	450.74229769884346	899.4700424644869	2	450.2745361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KIELSSSH_	REV__nc|ENSG00000155657|Q8WZ42-6|TTN	76.84663266511073	0.3498490246073164	2				NaN	NaN	0	NaN	2612	2684	5293
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5299	18.242	NaN	3262.2	30	0	770.64	0.106			+	-1	ISPARTVMY	9	43	351.8526306152344	NaN	0	351.8526306152344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_ISPARTVM(Oxidation (M))Y_	REV__ENSG00000178761|ENST00000357635|FAM219B;REV__ENST00000564857.1_1_15:75197493-75199009:-|nuORF;REV__ENST00000566894.1_1_15:75198581-75199111:-|nuORF;REV__nc|ENSG00000178761|Q5XKK7-2|FAM219B;REV__nc|ENSG00000178761|Q5XKK7-3|FAM219B	32.81241826257853	0.3119040447479903	2				NaN	NaN	0	NaN	2613	2684	5293
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5300	18.243	NaN	11411	30	0	4356.7	0.038	+			48008	VSQTLDIHKR	10	52	399.56249004563995	1195.66564073712	3	399.5629577636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VSQTLDIHKR_	ENSG00000104447|ENST00000395715|TRPS1;nc|ENSG00000104447|Q9UHF7-3|TRPS1;nc|ENSG00000104447|Q9UHF7|TRPS1;TRPS1|p.N1193Mfs*5|1|0.3|ENSG00000104447|chr8:115414291-115414291|T/-|frameshift_variant;TRPS1|p.N1276Kfs*5|1|0.21|ENSG00000104447|chr8:115414041-115414042|-/T|frameshift_variant	20.030474535948922	0.7146664069068879	2				NaN	NaN	0	NaN	2614	2684	5293
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5318	18.279	NaN	36969	30	0	21359	0.214			+	1990	AKEQSSYAF	9	85	515.7476763627577	1029.4807997923153	2	515.7510375976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AKEQSSYAF_	REV__ENSG00000183087|ENST00000327773|GAS6;REV__ENST00000610073.1_1_13:114523839-114538639:-|nuORF;REV__nc|ENSG00000183087|Q14393-1|GAS6;REV__nc|ENSG00000183087|Q14393-3|GAS6	76.7741389293348	0.11149722112137898	2				NaN	NaN	0	NaN	2629	2687	5317
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5319	18.283	NaN	35891	30	0	26540	0.106	+			32253	QTLDKVVRK	9	60	362.89242998893485	NaN	0	362.8924560546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QTLDKVVRK_	ENSG00000102893|ENST00000323584|PHKB;nc|ENSG00000102893|Q93100-2|PHKB;nc|ENSG00000102893|Q93100-3|PHKB;nc|ENSG00000102893|Q93100-4|PHKB;PHKB|p.G644Efs*2|1|0.12|ENSG00000102893|chr16:47650874-47650874|A/-|frameshift_variant;PHKB|p.L392*|1|0.37|ENSG00000102893|chr16:47594182-47594182|T/-|frameshift_variant;PHKB|p.N422Ifs*52|1|0.46|ENSG00000102893|chr16:47596427-47596427|A/-|frameshift_variant	58.78195531508484	0.1545138866451181	2				NaN	NaN	0	NaN	2630	2687	5317
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5320	18.285	NaN	53601	30	0	15346	0.032	+			35786	SEAGSHTL	8	92	401.18993940298543	800.3653258727709	2	401.19061279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEAGSHTL_	ENSG00000204592|ENST00000376630|HLA-E;ENSG00000204642|ENST00000259951|HLA-F;ENSG00000234745|ENST00000412585|HLA-B;ENST00000474381.1_1_6:31323854-31324663:-|nuORF;HLA-B|p.G124Wfs*15|1|0.18|ENSG00000234745|chr6:31356416-31356417|-/A|frameshift_variant;HLA-B|p.H215Tfs*11|1|0.35|ENSG00000234745|chr6:31355569-31355569|G/-|frameshift_variant;HLA-B|p.P209Qfs*5|6|0.16|ENSG00000234745|chr6:31355586-31355586|G/-|frameshift_variant;HLA-B|p.V306Afs*13|1|0.49|ENSG00000234745|chr6:31355202-31355202|A/-|frameshift_variant;HLA-B|p.V312Cfs*22|1|0.28|ENSG00000234745|chr6:31355185-31355186|-/A|frameshift_variant;nc|ENSG00000204642|P30511-2|HLA-F;nc|ENSG00000204642|P30511|HLA-F	124.59426212874841	0.22798698790419603	2				NaN	NaN	0	NaN	2631	2687	5317
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5337	18.319	NaN	84088	30	0	43929	0.214	+			49191	VVMRDPQTK	9	82	358.53013287870095	1072.568569236303	3	358.5304870605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVMRDPQTK_	ENSG00000170144|ENST00000392524|HNRNPA3;ENST00000437410.2_1_1:54441353-54441674:-|nuORF;ENST00000472163.1_1_3:75263799-75264780:+|nuORF;HNRNPA3|p.K200Rfs*147|1|0.13|ENSG00000170144|chr2:177216544-177216544|A/-|frameshift_variant;HNRNPA3|p.Y267Lfs*2|1|0.62|ENSG00000170144|chr2:177216918-177216919|-/T|frameshift_variant;nc|ENSG00000170144|P51991-2|HNRNPA3	45.02220120713402	0.3613509778819777	2				NaN	NaN	0	NaN	2645	2690	5336
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5338	18.323	NaN	22557	30	0	6204	0.106	+			35602	SCCPVGCAK	9	77	491.200008948937	980.385464964674	2	491.200927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_SCC(Carbamidomethyl (C))PVGC(Carbamidomethyl (C))AK_	CON__P67983;ENSG00000125144|ENST00000379811|MT1G;ENSG00000125148|ENST00000245185|MT2A;ENSG00000169688|ENST00000334346|MT1B;ENSG00000187193|ENST00000394485|MT1X;ENSG00000205364|ENST00000379818|MT1M;ENST00000330439.6_1_16:56660742-56660880:+|nuORF;ENST00000562017.1_1_16:56643131-56643263:+|nuORF;ENST00000563985.1_1_16:56642884-56643263:+|nuORF;ENST00000567300.1_1_16:56642646-56643263:+|nuORF;nc|ENSG00000125144|P13640-2|MT1G;nc|ENSG00000169715|P04732|MT1E	131.03138772384656	0.014687601201650916	2				NaN	NaN	0	NaN	2646	2690	5336
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5339	18.325	NaN	17211	30	0	1776.8	0.106				-1	 	0	78	435.76089044525486	869.5072279573097	2	435.76116943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2647	2690	5336
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5340	18.326	NaN	4209.9	30	0	546.27	0.106				-1	CILKKYRLVLH	11	65	481.6272359827501	1441.8598785484503	3	481.6274108886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_C(Carbamidomethyl (C))ILKKYRLVLH_	ENSG00000276747|ENST00000619609|PADI6	20.030474535948922	0.7766990143561855	2				NaN	NaN	0	NaN	2648	2690	5336
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5341	18.328	NaN	12539	30	0	2315.6	0.106	+			48763	VTVSGGTPK	9	62	423.2394100946858	844.4642672561716	2	423.2397766113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTVSGGTPK_	ENSG00000137804|ENST00000559596|NUSAP1;ENST00000558123.5_1_15:41625112-41672381:+|nuORF;nc|ENSG00000137804|Q9BXS6-2|NUSAP1;nc|ENSG00000137804|Q9BXS6-3|NUSAP1;nc|ENSG00000137804|Q9BXS6-4|NUSAP1;nc|ENSG00000137804|Q9BXS6-5|NUSAP1;nc|ENSG00000137804|Q9BXS6-6|NUSAP1;nc|ENSG00000137804|Q9BXS6-7|NUSAP1	141.52041321563706	0.009766778904176347	2				NaN	NaN	0	NaN	2649	2690	5336
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5342	18.33	NaN	27484	30	0	2739	0.037	+			20256	KEMTALRRK	9	93	378.2249636899397	1131.6530616700193	3	378.2253723144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KEMTALRRK_	ENSG00000156983|ENST00000383829|BRPF1;nc|ENSG00000156983|P55201-3|BRPF1;nc|ENSG00000156983|P55201-4|BRPF1;nc|ENSG00000156983|P55201|BRPF1	81.52500206392136	0.09095445986635249	2				NaN	NaN	0	NaN	2650	2690	5336
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5343	18.331	NaN	71995	30	0	11107	0.142				-1	 	0	93	572.3268673606437	1142.6391817880874	2	572.3279418945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2651	2690	5336
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5358	18.363	NaN	22187	30	0	5111	0.214	+			4766	ATNDSVVADK	10	80	510.25364756575294	1018.4927421983059	2	510.253662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATNDSVVADK_	ENSG00000205220|ENST00000358514|PSMB10;ENST00000575556.1_1_16:67970119-67970555:-|nuORF	185.2985610604283	0.0007057430040735469	2				NaN	NaN	0	NaN	2663	2693	5357
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5359	18.366	NaN	5346.8	30	0	3297.2	0.106				-1	 	0	40	324.53402690109647	970.5802513034894	3	324.53424072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2664	2693	5357
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5360	18.368	NaN	9381.3	30	0	3986.4	0.106			+	39744	STISTTVKTS	10	42	342.1889389458607	1023.5449874377821	3	342.18914794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STISTTVKTS_	REV__ENSG00000082074|ENST00000512982|FYB1;REV__nc|ENSG00000082074|O15117-3|FYB1;REV__nc|ENSG00000082074|O15117|FYB1	27.882242232435846	0.6521336255503853	2				NaN	NaN	0	NaN	2665	2693	5357
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5361	18.37	NaN	20632	30	0	2586.5	0.106	+			30928	QELKGVRLL	9	81	528.3315393461245	1054.6485257590489	2	528.332275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QELKGVRLL_	ENSG00000177963|ENST00000526104|RIC8A;ENST00000526982.1_1_11:209264-210619:+|nuORF;ENST00000527039.1_1_11:209766-212514:+|nuORF;nc|ENSG00000177963|Q9NPQ8-2|RIC8A;nc|ENSG00000177963|Q9NPQ8-3|RIC8A;nc|ENSG00000177963|Q9NPQ8-4|RIC8A	56.43379154798735	0.2433427591689151	2				NaN	NaN	0	NaN	2666	2693	5357
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5362	18.372	NaN	7338.2	30	0	1502	0.106	+			37110	SISSPQPGK	9	64	450.74229769884346	899.4700424644869	2	450.7425537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SISSPQPGK_	ENSG00000136279|ENST00000448521|DBNL;nc|ENSG00000136279|Q9UJU6-2|DBNL;nc|ENSG00000136279|Q9UJU6-3|DBNL;nc|ENSG00000136279|Q9UJU6-4|DBNL;nc|ENSG00000136279|Q9UJU6-5|DBNL;nc|ENSG00000136279|Q9UJU6-6|DBNL	71.87747018426188	0.13267044672804276	2				NaN	NaN	0	NaN	2667	2693	5357
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5363	18.374	NaN	7192.1	30	0	3341.4	0.036	+			41651	SVQVFGRKK	9	51	350.2133308230736	NaN	0	350.2134704589844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVQVFGRKK_	ENSG00000105193|ENST00000251453|RPS16;ENST00000469078.5_1_19:20235852-20236290:+|nuORF;ENST00000601390.1_1_19:39926180-39926535:-|nuORF	42.86426827375447	0.2558691296974908	2				NaN	NaN	0	NaN	2668	2693	5357
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5364	18.374	NaN	7765.8	30	0	912.3	0.139	+			15131	GTSDGRILK	9	66	473.76939375216654	945.5242345711331	2	473.76904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GTSDGRILK_	ENSG00000196576|ENST00000359337|PLXNB2;PLXNB2|p.G872Vfs*42|1|0.08|ENSG00000196576|chr22:50283401-50283401|C/-|frameshift_variant;PLXNB2|p.L1362Rfs*32|1|0.1|ENSG00000196576|chr22:50280578-50280579|CA/-|frameshift_variant;PLXNB2|p.V873Cfs*66|1|0.2|ENSG00000196576|chr22:50283400-50283401|-/C|frameshift_variant;PLXNB2|p.V928Cfs*3|1|0.71|ENSG00000196576|chr22:50283084-50283084|C/-|frameshift_variant	75.04331003522576	0.118981335847003	2				NaN	NaN	0	NaN	2669	2693	5357
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5381	18.409	NaN	56069	30	0	8677.1	0.214	+			26187	LSRQKRSQL	9	108	372.5603782595411	1114.6593053788233	3	372.5596618652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSRQKRSQL_	ENST00000453466.1_1_7:102939135-102952715:+|nuORF	56.72105179125745	0.24094814563026265	2				NaN	NaN	0	NaN	2683	2696	5380
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5382	18.413	NaN	28579	30	0	3914.9	0.106	+			34524	RVGTVIGSNK	10	102	515.8038680817431	1029.593183230286	2	515.8043823242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RVGTVIGSNK_	ENSG00000143799|ENST00000366794|PARP1;ENST00000413631.1_1_13:111590511-111591024:+|nuORF;PARP1|p.T799Lfs*41|1|0.39|ENSG00000143799|chr1:226367491-226367491|T/-|frameshift_variant	72.2432373244024	0.2589930451692646	2				NaN	NaN	0	NaN	2684	2696	5380
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5383	18.415	NaN	12562	30	0	3055.6	0.106	+			22043	KSIQSGPLK	9	74	479.2892462118759	956.5639394905518	2	479.2901611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KSIQSGPLK_	ENSG00000132305|ENST00000410111|IMMT;ENST00000474969.5_1_2:86385703-86422514:-|nuORF;ENST00000486633.1_1_2:86400704-86422514:-|nuORF;nc|ENSG00000132305|Q16891-2|IMMT;nc|ENSG00000132305|Q16891-3|IMMT;nc|ENSG00000132305|Q16891-4|IMMT	140.11223852658463	0.010427410095706195	2				NaN	NaN	0	NaN	2685	2696	5380
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5384	18.417	NaN	7255	30	0	873.93	0.106	+			30562	QALSTELLKL	10	80	558.3362760949158	1114.6579992566315	2	558.3348388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QALSTELLKL_	ENSG00000144821|ENST00000693548|MYH15;ENST00000478998.5_1_3:108124174-108178278:-|nuORF	66.96192283764107	0.30252237217063654	2				NaN	NaN	0	NaN	2686	2696	5380
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5385	18.418	NaN	14074	30	0	3331.8	0.106	+			10053	ESERRAKE	8	64	502.7593505603853	1003.5041481875706	2	502.75994873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ESERRAKE_	ENSG00000186575|ENST00000338641|NF2;nc|ENSG00000186575|P35240-2|NF2;nc|ENSG00000186575|P35240-3|NF2;nc|ENSG00000186575|P35240-4|NF2;nc|ENSG00000186575|P35240-5|NF2;nc|ENSG00000186575|P35240-6|NF2;nc|ENSG00000186575|P35240-8|NF2	44.116797842482775	0.6307669463330267	2				NaN	NaN	0	NaN	2687	2696	5380
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5386	18.42	NaN	3863.1	30	0	826.46	0.033				-1	VRMASAPAG	9	55	438.2235210070762	874.4324890809525	2	438.2240905761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_VRM(Oxidation (M))ASAPAG_	HIVEP2|p.S1616Afs*32|1|0.48|ENSG00000010818|chr6:142769894-142769894|G/-|frameshift_variant	44.116797842482775	0.37197099687881774	2				NaN	NaN	0	NaN	2688	2696	5380
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5387	18.421	NaN	4713.8	30	0	1156.9	0.139	+			47252	VMRDPQTK	8	72	487.75774079766757	973.5009286621352	2	487.7582702636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VMRDPQTK_	ENSG00000170144|ENST00000392524|HNRNPA3;ENST00000437410.2_1_1:54441353-54441674:-|nuORF;ENST00000472163.1_1_3:75263799-75264780:+|nuORF;HNRNPA3|p.K200Rfs*147|1|0.13|ENSG00000170144|chr2:177216544-177216544|A/-|frameshift_variant;HNRNPA3|p.Y267Lfs*2|1|0.62|ENSG00000170144|chr2:177216918-177216919|-/T|frameshift_variant;nc|ENSG00000170144|P51991-2|HNRNPA3	104.0567914643314	0.248440647781298	2				NaN	NaN	0	NaN	2689	2696	5380
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5403	18.455	NaN	180200	30	0	30787	0.195	+			49540	VYAQKHQQL	9	106	372.2046057772705	1113.5919879320115	3	372.20489501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYAQKHQQL_	ENSG00000197323|ENST00000358465|TRIM33;nc|ENSG00000197323|Q9UPN9-2|TRIM33;TRIM33|p.L700Efs*5|1|0.07|ENSG00000197323|chr1:114410281-114410282|-/CAGAATTCTCC|frameshift_variant	42.396135135203025	0.392153681582562	2				NaN	NaN	0	NaN	2702	2699	5402
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5404	18.458	NaN	6314.8	30	0	628.7	0.106	+			50803	YEQKAAKL	8	69	475.7685750543147	949.5225971754294	2	475.768798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YEQKAAKL_	ENSG00000164104|ENST00000296503|HMGB2;ENST00000511316.1_1_4:174253953-174254163:-|nuORF	82.24051045832904	0.30490469762271794	2				NaN	NaN	0	NaN	2703	2699	5402
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5405	18.46	NaN	5937.1	30	0	896.62	0.106	+			41394	SVMNTSNPK	9	62	489.2385566838542	976.4625604345084	2	489.2393493652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVMNTSNPK_	ATP9B|p.N368Ifs*13|1|0.37|ENSG00000166377|chr18:79214029-79214029|A/-|frameshift_variant;ATP9B|p.N368Kfs*2|1|0.4|ENSG00000166377|chr18:79214028-79214029|-/A|frameshift_variant;ENSG00000166377|ENST00000426216|ATP9B;ENST00000585674.1_1_18:76966984-77037243:+|nuORF;nc|ENSG00000166377|O43861-2|ATP9B	120.30596017624542	0.02101454110788768	2				NaN	NaN	0	NaN	2704	2699	5402
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5406	18.462	NaN	3598.3	30	0	567.66	0.106			+	20899	KIRRGKKKQ	9	55	381.25999734418724	1140.7581626327617	3	381.2602844238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KIRRGKKKQ_	REV__ATRX|p.R1425G|1|0.44|ENSG00000085224|chrX:77654142-77654142|T/C|missense_variant	66.42927471994793	0.16001998865088202	2				NaN	NaN	0	NaN	2705	2699	5402
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5407	18.464	NaN	2977.9	30	0	400.62	0.106	+			49475	VVYQGGTSR	9	53	483.7537009326343	965.4928489320686	2	483.753662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVYQGGTSR_	ENSG00000127831|ENST00000248444|VIL1	47.657333605630114	0.33044192980041115	2				NaN	NaN	0	NaN	2706	2699	5402
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5408	18.466	NaN	2643.4	30	0	411.49	0.106			+	29710	PHGAAIPTK	9	49	446.2555028340935	890.496452734987	2	446.2558288574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PHGAAIPTK_	REV__ENSG00000166411|ENST00000299518|IDH3A;REV__ENST00000558509.5_1_15:78453927-78455839:+|nuORF;REV__ENST00000559889.5_1_15:78449787-78454580:+|nuORF;REV__IDH3A|p.L308Ffs*6|1|0.05|ENSG00000166411|chr15:78166206-78166207|-/TT|frameshift_variant;REV__IDH3A|p.L309Gfs*5|1|0.04|ENSG00000166411|chr15:78166208-78166209|-/GG|frameshift_variant;REV__nc|ENSG00000166411|P50213-2|IDH3A	44.116797842482775	0.37197099687881774	2				NaN	NaN	0	NaN	2707	2699	5402
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5409	18.467	NaN	8811.2	30	0	5058.4	0.038			+	30316	PTPTNATRRF	10	46	387.5435577102679	1159.6088437310038	3	388.548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PTPTNATRRF_	REV__CON__Q2KJ83	33.921630207806714	0.6028135429846169	2				NaN	NaN	0	NaN	2708	2699	5402
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5422	18.495	NaN	14816	30	0	2513.9	0.214	+			17742	IEQEKRSEI	9	78	566.3031672153767	1130.5917814975533	2	566.303955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IEQEKRSEI_	ENSG00000034510|ENST00000233143|TMSB10	101.45984612302182	0.0377122763612125	2				NaN	NaN	0	NaN	2718	2702	5421
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5423	18.498	NaN	5347.5	30	0	442.49	0.106	+			49057	VVIRTANAQ	9	61	486.2845703130211	970.5545876928422	2	486.2851257324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVIRTANAQ_	ENSG00000144815|ENST00000273347|NXPE3;NXPE3|p.R510Sfs*31|1|0.11|ENSG00000144815|chr3:101821799-101821800|-/T|frameshift_variant	40.77816245573522	0.41113185337114944	2				NaN	NaN	0	NaN	2719	2702	5421
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5424	18.5	NaN	16904	30	0	5370.7	0.106			+	9346	EIPCRCLKL	9	72	377.87126686816333	1130.59197120469	3	377.8714904785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_EIPC(Carbamidomethyl (C))RCLKL_	REV__ENST00000389385.8_1_12:113335508-113335769:+|nuORF	54.776311868738084	0.25715957988447635	2				NaN	NaN	0	NaN	2720	2702	5421
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5425	18.502	NaN	24462	30	0	4905.1	0.106				-1	 	0	74	446.22968205331	890.44481117342	2	446.229736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2721	2702	5421
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5426	18.504	NaN	2397.6	30	0	148.94	0.106	+			21758	KQQGPILTK	9	63	506.81068510928566	1011.6068172853713	2	506.8113098144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KQQGPILTK_	ENSG00000129351|ENST00000588657|ILF3;ENST00000587928.5_1_19:10792469-10795138:+|nuORF;nc|ENSG00000129351|Q12906-4|ILF3;nc|ENSG00000129351|Q12906-6|ILF3	104.42354056486148	0.0346881550498418	2				NaN	NaN	0	NaN	2722	2702	5421
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5427	18.506	NaN	5880.4	30	0	1314.4	0.106	+			45	AAAPAGRAM	9	59	408.21257928345364	814.4106056337073	2	408.2131652832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AAAPAGRAM_	ENSG00000115525|ENST00000638572|ST3GAL5;ENST00000484728.6_2_2:86088279-86116028:-|nuORF	47.91560031466742	0.327412564698279	2				NaN	NaN	0	NaN	2723	2702	5421
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5428	18.507	NaN	8364.4	30	0	1490.1	0.038			+	38162	SQARGLCVRSQ	11	63	402.2117525317349	1203.6134281954046	3	402.2123718261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SQARGLCVRSQ_	REV__ENSG00000143851|ENST00000691036|PTPN7;REV__ENST00000492977.5_1_1:202119404-202127449:-|nuORF;REV__nc|ENSG00000143851|P35236-2|PTPN7;REV__nc|ENSG00000143851|P35236-3|PTPN7	28.5767321226876	0.690044582712672	2				NaN	NaN	0	NaN	2724	2702	5421
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5444	18.541	NaN	30368	30	0	4931.3	0.214	+			41065	SVIKNVSTK	9	86	488.2948374951293	974.5751220570586	2	488.2951965332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVIKNVSTK_	ENSG00000122257|ENST00000319715|RBBP6;nc|ENSG00000122257|Q7Z6E9-2|RBBP6;nc|ENSG00000122257|Q7Z6E9-4|RBBP6;RBBP6|p.D1432Vfs*9|1|0.04|ENSG00000122257|chr16:24571360-24571361|-/TTTTCCCTTTTTC|frameshift_variant;RBBP6|p.T1475Lfs*20|1|0.3|ENSG00000122257|chr16:24571483-24571483|A/-|frameshift_variant	209.21039097705471	5.5375157516244266E-08	2				NaN	NaN	0	NaN	2737	2705	5443
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5445	18.544	NaN	16270	30	0	1400.8	0.106	+			34530	RVIAKALEK	9	86	343.2253953077824	1026.6543565235472	3	343.2255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RVIAKALEK_	ENSG00000100401|ENST00000356244|RANGAP1	101.25262130126117	0.03792372629710479	2				NaN	NaN	0	NaN	2738	2705	5443
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5446	18.546	NaN	4660.8	30	0	771.12	0.106				-1	 	0	59	474.2248161356613	473.2175396690613	1	474.2249755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2739	2705	5443
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5447	18.548	NaN	5167.1	30	0	1531.9	0.106				-1	GSFTCQCKPG	10	49	381.1644463774715	1140.4715097326145	3	381.1648254394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_GSFTC(Carbamidomethyl (C))QC(Carbamidomethyl (C))KPG_	ENSG00000116962|ENST00000264187|NID1	21.68575002086885	0.7027366847906487	2				NaN	NaN	0	NaN	2740	2705	5443
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5448	18.55	NaN	5817	30	0	1285.2	0.106			+	-1	VVVVRAPCSS	10	43	358.53013287870095	1072.568569236303	3	358.56072998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_VVVVRAPC(Carbamidomethyl (C))SS_	REV__KCNF1|p.A185V|1|0.36|ENSG00000162975|chr2:10912980-10912980|C/T|missense_variant	22.579656572578934	0.6954366826851017	2				NaN	NaN	0	NaN	2741	2705	5443
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5449	18.552	NaN	3651.7	30	0	540.27	0.035			+	20168	KEKSIDSLS	9	66	503.77457389935245	1005.5345948655049	2	503.77471923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KEKSIDSLS_	REV__tr|U7T012|U7T012_FUSNUPeptidaseS8/S53domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00769PE=3SV=1	52.936696900407355	0.27249468807391813	2				NaN	NaN	0	NaN	2742	2705	5443
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5450	18.552	NaN	3993.8	30	0	383.92	0.14	+			12698	GEKKNEALM	9	60	510.26242160578767	1018.5102902783754	2	510.2634582519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GEKKNEALM_	ENSG00000118482|ENST00000262043|PHF3;nc|ENSG00000118482|Q92576-2|PHF3;PHF3|p.E392Vfs*39|1|0.09|ENSG00000118482|chr6:63684870-63684871|-/TGCTGATAAAACTGAGAACACCCTTG|frameshift_variant;PHF3|p.F1399Lfs*30|1|0.31|ENSG00000118482|chr6:63711780-63711780|T/-|frameshift_variant;PHF3|p.I876Yfs*26|1|0.08|ENSG00000118482|chr6:63694705-63694705|A/-|frameshift_variant;PHF3|p.K1984Vfs*10|2|0.05|ENSG00000118482|chr6:63713536-63713537|-/TGTGAATCACTAT|frameshift_variant;PHF3|p.N1400*|1|0.17|ENSG00000118482|chr6:63711779-63711780|-/T|frameshift_variant;PHF3|p.N993Tfs*9|1|0.33|ENSG00000118482|chr6:63698597-63698597|A/-|frameshift_variant;PHF3|p.R971Sfs*6|1|0.27|ENSG00000118482|chr6:63698526-63698527|-/T|frameshift_variant;PHF3|p.V1137*|1|0.32|ENSG00000118482|chr6:63706063-63706063|A/-|frameshift_variant	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	2743	2705	5443
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5463	18.581	NaN	20069	30	0	2769.1	0.215	+			27133	MASRTSSEM	9	79	500.2143672658657	998.4141815985314	2	500.21514892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MASRTSSEM_	ENSG00000265972|ENST00000582401|TXNIP;ENST00000488537.1_1_1:145440673-145441098:+|nuORF;nc|ENSG00000265972|Q9H3M7-2|TXNIP	163.1509380574825	0.003936019289634439	2				NaN	NaN	0	NaN	2753	2708	5462
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5464	18.585	NaN	22220	30	0	4836.4	0.106				-1	 	0	77	414.7373278650553	827.4601027969106	2	414.73773193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2754	2708	5462
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5465	18.587	NaN	10046	30	0	3352.3	0.106	+			4069	ATDKSFVEK	9	76	512.7687783786243	1023.5230038240487	2	512.7691650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATDKSFVEK_	ENSG00000100345|ENST00000216181|MYH9;ENSG00000105357|ENST00000642316|MYH14;ENSG00000133392|ENST00000300036|MYH11;MYH14|p.L1950Sfs*14|1|0.34|ENSG00000105357|chr19:50309646-50309646|C/-|frameshift_variant;MYH14|p.M997*|1|0.19|ENSG00000105357|chr19:50271483-50271483|A/-|frameshift_variant;MYH14|p.R929Gfs*44|1|0.38|ENSG00000105357|chr19:50268237-50268237|G/-|frameshift_variant;MYH9|p.I784*|1|0.07|ENSG00000100345|chr22:36304036-36304036|G/-|frameshift_variant;nc|ENSG00000100345|P35579-2|MYH9;nc|ENSG00000105357|Q7Z406-4|MYH14;nc|ENSG00000105357|Q7Z406-5|MYH14;nc|ENSG00000105357|Q7Z406-6|MYH14;nc|ENSG00000105357|Q7Z406|MYH14;nc|ENSG00000133392|P35749-2|MYH11;nc|ENSG00000133392|P35749-3|MYH11;nc|ENSG00000133392|P35749-4|MYH11	93.5975768576971	0.05472259948179787	2				NaN	NaN	0	NaN	2755	2708	5462
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5466	18.589	NaN	15450	30	0	9309.4	0.106				-1	 	0	70	424.2290920937647	846.4436312543294	2	424.22930908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2756	2708	5462
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5467	18.591	NaN	6378.7	30	0	1714.7	0.106			+	32081	QSDGLVWRL	9	61	537.2909396923751	1072.5673264515501	2	537.2926025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QSDGLVWRL_	REV__ENSG00000198785|ENST00000361820|GRIN3A;REV__GRIN3A|p.G487Efs*29|1|0.14|ENSG00000198785|chr9:101670952-101670952|C/-|frameshift_variant	50.033510581677724	0.3025703251535696	2				NaN	NaN	0	NaN	2757	2708	5462
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5468	18.592	NaN	16843	30	0	4189.8	0.038	+			30968	QEQEQTAEPL	10	65	391.51876452241345	1171.5344641674403	3	391.5195007324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QEQEQTAEPL_	ENSG00000119725|ENST00000555044|ZNF410;nc|ENSG00000119725|Q86VK4-4|ZNF410;nc|ENSG00000119725|Q86VK4-5|ZNF410;ZNF410|p.L434Sfs*8|1|0.04|ENSG00000119725|chr14:73923423-73923424|-/TCTATTT|frameshift_variant	30.317721548370564	0.6322445173429027	2				NaN	NaN	0	NaN	2758	2708	5462
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5469	18.593	NaN	6783.5	30	0	1768.3	0.138	+			48333	VTGGATGIGK	10	60	430.74487604184077	859.4751991504816	2	430.7452697753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VTGGATGIGK_	ENSG00000115425|ENST00000265322|PECR;ENST00000474093.5_1_2:216929948-216946521:-|nuORF;ENST00000487318.6_1_2:216928831-216946521:-|nuORF;ENST00000497889.5_1_2:216915539-216946464:-|nuORF	85.86182877749512	0.1547657473298402	2				NaN	NaN	0	NaN	2759	2708	5462
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5482	18.622	NaN	24775	30	0	4909.2	0.214				-1	 	0	75	534.7561440578401	1067.49773518248	2	534.7573852539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2769	2711	5481
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5483	18.626	NaN	4102	30	0	1093.8	0.106	+			35620	SCCPVGCSK	9	58	470.68721513247937	939.3598773317588	2	470.6875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SCC(Carbamidomethyl (C))PVGCSK_	ENSG00000198417|ENST00000334350|MT1F;ENST00000564295.1_1_16:56692857-56693073:+|nuORF	79.71258880314673	0.09879134589249085	2				NaN	NaN	0	NaN	2770	2711	5481
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5484	18.628	NaN	8641.9	30	0	789.09	0.106	+			1256	AERVKQENL	9	79	543.799218092274	NaN	0	543.799072265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AERVKQENL_	ENSG00000153574|ENST00000283646|RPIA	88.17693792209575	0.04527150213038833	2				NaN	NaN	0	NaN	2771	2711	5481
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5485	18.63	NaN	5885	30	0	659.33	0.106	+			2	AAAAALQAK	9	55	407.742219927158	813.469886921116	2	407.7425537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AAAAALQAK_	ENSG00000174444|ENST00000307961|RPL4;ENST00000567229.5_1_15:66791747-66793486:-|nuORF	79.45101966838831	0.09992237243120712	2				NaN	NaN	0	NaN	2772	2711	5481
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5486	18.631	NaN	2016.3	30	0	298.91	0.106			+	43847	TLVEERTQ	8	55	488.25835693679096	974.5021609403819	2	488.25860595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TLVEERTQ_	REV__ENSG00000197980|ENST00000356539|LEKR1	35.61828744233558	0.6843154725607303	2				NaN	NaN	0	NaN	2773	2711	5481
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5487	18.633	NaN	4100.5	30	0	689.7	0.106	+			40556	SVADVSSSR	9	54	454.2272765666061	906.4400002000123	2	454.22747802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVADVSSSR_	ENSG00000076351|ENST00000612814|SLC46A1;ENST00000582590.1_1_17:26731487-26733159:-|nuORF;nc|ENSG00000076351|Q96NT5-2|SLC46A1	66.96192283764107	0.15557981141143568	2				NaN	NaN	0	NaN	2774	2711	5481
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5488	18.635	NaN	2218	30	0	270.62	0.036	+			34243	RTGPACMPTK	10	66	559.7749559097317	1117.5353588862633	2	559.7760620117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_RTGPAC(Carbamidomethyl (C))MPTK_	ENST00000311604.7_1_11:1902696-1904704:+|nuORF;LSP1|p.Q108Sfs*31|3|0.4|ENSG00000130592|chr11:1881556-1881556|C/-|frameshift_variant	70.39856735676683	0.27406383984062843	2				NaN	NaN	0	NaN	2775	2711	5481
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5502	18.665	NaN	285390	30	0	32313	0.155	+			34383	RTSEIYVHR	9	121	387.5435577102679	1159.6088437310038	3	387.5437927246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTSEIYVHR_	ENSG00000089737|ENST00000621632|DDX24;ENST00000555762.1_1_14:94517539-94521656:-|nuORF;nc|ENSG00000089737|Q9GZR7-2|DDX24	96.66504779109242	0.04607440320619715	2				NaN	NaN	0	NaN	2786	2714	5501
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5503	18.668	NaN	43886	30	0	16052	0.106	+			5121	ATSSTLVSK	9	83	447.2502748988258	892.4859968644516	2	447.2504577636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATSSTLVSK_	ENST00000332782.6_1_12:57640633-57642538:-|nuORF	109.47833844074708	0.029530294723441826	2				NaN	NaN	0	NaN	2787	2714	5501
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5504	18.67	NaN	15158	30	0	4082	0.106			+	21169	KKVSVLAN	8	78	429.7735807977559	857.5326086623119	2	429.77386474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KKVSVLAN_	REV__ABCA13|p.A4442Pfs*3|1|0.06|ENSG00000179869|chr7:48506365-48506365|G/-|frameshift_variant;REV__ABCA13|p.E1535Lfs*6|1|0.06|ENSG00000179869|chr7:48274267-48274268|-/TTTAGGTTTCTTCTCT|frameshift_variant;REV__ABCA13|p.H2188Ifs*3|1|0.11|ENSG00000179869|chr7:48276226-48276226|C/-|frameshift_variant;REV__ABCA13|p.K1949Rfs*10|1|0.04|ENSG00000179869|chr7:48275509-48275510|-/TCGGG|frameshift_variant;REV__ABCA13|p.K3855Nfs*139|1|0.3|ENSG00000179869|chr7:48389131-48389153|GGCTGTGGTCCAAGACCTCAGCC/-|frameshift_variant;REV__ABCA13|p.L1248Tfs*2|1|0.16|ENSG00000179869|chr7:48273400-48273401|-/A|frameshift_variant;REV__ABCA13|p.N1764Tfs*18|1|0.33|ENSG00000179869|chr7:48274953-48274953|A/-|frameshift_variant;REV__ABCA13|p.P1447Tfs*22|1|0.49|ENSG00000179869|chr7:48273997-48273998|-/A|frameshift_variant;REV__ABCA13|p.S1533Lfs*16|1|0.1|ENSG00000179869|chr7:48274262-48274263|-/CT|frameshift_variant;REV__ENSG00000179869|ENST00000435803|ABCA13;REV__nc|ENSG00000179869|Q86UQ4-4|ABCA13;REV__nc|ENSG00000179869|Q86UQ4|ABCA13	90.77665401227738	0.27511901818546464	2				NaN	NaN	0	NaN	2788	2714	5501
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5505	18.672	NaN	20461	30	0	7454.3	0.106				-1	ATLLREMAA	9	50	331.17925889262335	990.5159472780701	3	331.1795959472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_ATLLREM(Oxidation (M))AA_	DNAH2|p.I2363Yfs*40|1|0.31|ENSG00000183914|chr17:7792278-7792278|C/-|frameshift_variant;DNAH2|p.K4326Rfs*84|3|0.27|ENSG00000183914|chr17:7832920-7832920|C/-|frameshift_variant;DNAH2|p.Q4263Sfs*13|1|0.12|ENSG00000183914|chr17:7832639-7832639|C/-|frameshift_variant;ENSG00000183914|ENST00000572933|DNAH2;nc|ENSG00000183914|Q9P225-2|DNAH2	35.61828744233558	0.47037581924408073	2				NaN	NaN	0	NaN	2789	2714	5501
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5506	18.674	NaN	19920	30	0	4551	0.106	+			37684	SLSELFSNK	9	87	512.7687783786243	1023.5230038240487	2	513.2740478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SLSELFSNK_	ENST00000570269.2_3_3:114047125-114047275:-|nuORF	54.776311868738084	0.25715957988447635	2				NaN	NaN	0	NaN	2790	2714	5501
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5507	18.675	NaN	6957.1	30	0	758.61	0.106			+	18070	IKEQHTRQI	9	63	384.88729459196844	1151.6400543761054	3	384.88751220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IKEQHTRQI_	REV__nc|ENSG00000048991|Q15032-4|R3HDM1	82.7504851949679	0.08565546331141553	2				NaN	NaN	0	NaN	2791	2714	5501
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5508	18.677	NaN	3531.8	30	0	617.2	0.034	+			48662	VTSSLGSVPD	10	61	481.2447979962768	960.4750430593537	2	481.2452697753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VTSSLGSVPD_	ENST00000548460.2_1_7:144532514-144532616:-|nuORF	56.72105179125745	0.3956618550748046	2				NaN	NaN	0	NaN	2792	2714	5501
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5521	18.705	NaN	5091.4	30	0	763.23	0.214	+			19796	KEASTTVRV	9	68	495.7821822446586	989.5498115561172	2	495.78277587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEASTTVRV_	ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;nc|ENSG00000185164|Q5JPE7-3|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2;NOMO1|p.P1102Hfs*42|1|0.36|ENSG00000103512|chr16:14886838-14886838|C/-|frameshift_variant	96.0336014099291	0.047854655524928534	2				NaN	NaN	0	NaN	2802	2717	5520
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5522	18.708	NaN	6618	30	0	1746.5	0.106	+			42682	TCHAANLAGQ	10	70	493.2291727097486	984.4437924862972	2	493.2298583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TCHAANLAGQ_	ENSG00000112655|ENST00000230419|PTK7;nc|ENSG00000112655|Q13308-2|PTK7;nc|ENSG00000112655|Q13308-3|PTK7;nc|ENSG00000112655|Q13308-4|PTK7;nc|ENSG00000112655|Q13308-5|PTK7;nc|ENSG00000112655|Q13308-6|PTK7;PTK7|p.D618Gfs*36|1|0.42|ENSG00000112655|chr6:43142009-43142010|-/G|frameshift_variant;PTK7|p.P510Hfs*39|1|0.35|ENSG00000112655|chr6:43139435-43139435|C/-|frameshift_variant	36.446750945000026	0.5818864909973037	2				NaN	NaN	0	NaN	2803	2717	5520
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5523	18.71	NaN	4519.1	30	0	657.5	0.106	+			38529	SSDGDLCLV	9	57	483.2155707556537	964.4165885781074	2	483.21600341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SSDGDLC(Carbamidomethyl (C))LV_	ENSG00000164329|ENST00000453514|TENT2;nc|ENSG00000164329|Q6PIY7-2|TENT2	63.30626980617807	0.18605348971131092	2				NaN	NaN	0	NaN	2804	2717	5520
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5524	18.712	NaN	6516.3	30	0	569.44	0.106	+			30514	QAGKSVGVVT	10	72	473.2731576896632	944.5317624461264	2	473.2733459472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QAGKSVGVVT_	ENSG00000163295|ENST00000295463|ALPI	47.657333605630114	0.47858658696240314	2				NaN	NaN	0	NaN	2805	2717	5520
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5525	18.714	NaN	4715.5	30	0	1015	0.106	+			20339	KERNPISVKN	10	51	395.56274209708226	1183.6663968914468	3	395.5631408691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KERNPISVKN_	ENST00000358582.8_1_19:38159870-38160044:-|nuORF	38.753607047826485	0.5606299674732264	2				NaN	NaN	0	NaN	2806	2717	5520
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5526	18.716	NaN	2937.7	30	0	567.59	0.037				-1	SHTMIPPATY	10	62	567.2691009392296	1132.523648945259	2	567.2708740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_SHTM(Oxidation (M))IPPATY_	ENSG00000038219|ENST00000040738|BOD1L1	51.33545320467046	0.4446945571623749	2				NaN	NaN	0	NaN	2807	2717	5520
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5527	18.716	NaN	5142.9	30	0	792.1	0.14	+			15920	HADASSKVL	9	59	464.24781325330406	926.4810735734081	2	464.24822998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HADASSKVL_	ENSG00000166169|ENST00000370162|POLL;ENST00000339310.7_1_10:103343400-103347291:-|nuORF	62.107414245175825	0.1960472003779324	2				NaN	NaN	0	NaN	2808	2717	5520
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5539	18.744	NaN	74636	30	0	26679	0.214	+			14476	GTCGKSLISK	10	96	525.7832928233377	1049.5520327134752	2	525.7846069335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GTC(Carbamidomethyl (C))GKSLISK_	ENSG00000118322|ENST00000327245|ATP10B	150.81021883065287	0.008351675499118036	2				NaN	NaN	0	NaN	2817	2720	5538
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5540	18.747	NaN	28567	30	0	7486.5	0.106				-1	 	0	80	454.2579439562679	906.5013349793359	2	454.25823974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2818	2720	5538
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5541	18.749	NaN	18615	30	0	1733.2	0.106			+	27348	MIKEWEEFS	9	83	599.7759406566303	1197.5373283800604	2	599.7762451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MIKEWEEFS_	REV__ENSG00000121988|ENST00000264159|ZRANB3;REV__nc|ENSG00000121988|Q5FWF4-3|ZRANB3;REV__nc|ENSG00000121988|Q5FWF4-5|ZRANB3;REV__ZRANB3|p.R533Dfs*3|1|0.42|ENSG00000121988|chr2:135230870-135230870|T/-|frameshift_variant	65.80317337860623	0.1652391959156183	2				NaN	NaN	0	NaN	2819	2720	5538
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5542	18.751	NaN	14572	30	0	3802	0.106	+			3660	ASYLADKKK	9	76	512.294661224441	1022.5747695156821	2	512.2952880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASYLADKKK_	ENSG00000179562|ENST00000321407|GCC1;GCC1|p.T633Afs*8|1|0.05|ENSG00000179562|chr7:127582446-127582447|-/CA|frameshift_variant	80.45461616416974	0.09558281504443908	2				NaN	NaN	0	NaN	2820	2720	5538
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5543	18.753	NaN	5697.5	30	0	1259.3	0.106	+			3101	ASGGPGPLGP	10	56	405.21087179030866	808.4071906474173	2	405.2113037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASGGPGPLGP_	ENST00000263620.3_19:974543-975197:+|nuORF	63.30626980617807	0.33577009411590547	2				NaN	NaN	0	NaN	2821	2720	5538
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5544	18.755	NaN	3249.5	30	0	691.38	0.033	+			22639	KTVNLATAG	9	58	437.75287208911635	873.4911912450327	2	437.7530822753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KTVNLATAG_	ENSG00000100167|ENST00000644076|SEPTIN3	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	2822	2720	5538
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5545	18.755	NaN	4872.8	30	0	857.16	0.143	+			35184	SAINDKSIVKK	11	62	401.57465986944806	1201.7021502085443	3	401.5749816894531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SAINDKSIVKK_	ENSG00000131351|ENST00000253669|HAUS8;nc|ENSG00000131351|Q9BT25-2|HAUS8;nc|ENSG00000131351|Q9BT25-3|HAUS8	31.068146907933308	0.6639116734509778	2				NaN	NaN	0	NaN	2823	2720	5538
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5557	18.783	NaN	6344.1	30	0	570.41	0.214	+			981	AEKEMHNL	8	67	486.2338711330996	970.4531893329993	2	486.2342224121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEKEMHNL_	ENSG00000101782|ENST00000339486|RIOK3;ENST00000581302.5_1_18:21033283-21057068:+|nuORF;nc|ENSG00000101782|O14730-2|RIOK3;RIOK3|p.L482*|1|0.4|ENSG00000101782|chr18:23479412-23479412|T/-|frameshift_variant	98.62937762414208	0.25143494708580966	2				NaN	NaN	0	NaN	2832	2723	5556
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5558	18.787	NaN	7312.8	30	0	1361.2	0.106	+			34006	RSIDKPLAR	9	77	528.3190428589606	1054.6235327847212	2	528.3203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RSIDKPLAR_	ENST00000456324.5_1_19:36726911-36727052:+|nuORF	77.53327743719008	0.1082147015697554	2				NaN	NaN	0	NaN	2833	2723	5556
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5559	18.788	NaN	10270	30	0	2059.4	0.106			+	-1	FLLEMDSPG	9	76	512.7357635823389	1023.4569742314778	2	512.7383422851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_FLLEM(Oxidation (M))DSPG_	REV__CAD|p.N1541Mfs*15|1|0.33|ENSG00000084774|chr2:27237773-27237773|A/-|frameshift_variant;REV__CAD|p.Q1172Tfs*37|1|0.41|ENSG00000084774|chr2:27234113-27234114|-/C|frameshift_variant;REV__CAD|p.Q902Hfs*2|1|0.42|ENSG00000084774|chr2:27232507-27232508|AG/-|frameshift_variant;REV__ENSG00000084774|ENST00000264705|CAD	53.351449002276354	0.2690372970092375	2				NaN	NaN	0	NaN	2834	2723	5556
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5560	18.79	NaN	14887	30	0	2772.2	0.106	+			40572	SVAEHPLSR	9	75	498.26666240563117	994.5187718780624	2	498.2670593261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVAEHPLSR_	ENSG00000142207|ENST00000382751|URB1;URB1|p.R2106W|1|0.08|ENSG00000142207|chr21:32316784-32316784|G/A|missense_variant	120.8684288430529	0.02067403653475984	2				NaN	NaN	0	NaN	2835	2723	5556
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5561	18.792	NaN	25770	30	0	4948.2	0.106	+			109	AAEKGVRTL	9	84	472.7795715332031	NaN	0	472.7795715332031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AAEKGVRTL_	ENSG00000105355|ENST00000221957|PLIN3;nc|ENSG00000105355|O60664-3|PLIN3;nc|ENSG00000105355|O60664-4|PLIN3	99.01295224348159	0.023427377858318825	2				NaN	NaN	0	NaN	2836	2723	5556
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5562	18.794	NaN	3935	30	0	540.32	0.039	+			5334	ATVPKTEIREK	11	66	424.58172772166984	1270.7233537652096	3	424.5819396972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATVPKTEIREK_	ENSG00000138326|ENST00000372360|RPS24;ENST00000465692.1_1_10:79795142-79808843:+|nuORF;ENST00000466129.5_1_10:79793659-79795541:+|nuORF;ENST00000478655.5_1_10:79793659-79797065:+|nuORF;ENST00000485708.6_1_10:79793659-79797725:+|nuORF;nc|ENSG00000138326|P62847-3|RPS24;nc|ENSG00000138326|P62847-4|RPS24;nc|ENSG00000138326|P62847|RPS24	35.17822180527639	0.6208003396870814	2				NaN	NaN	0	NaN	2837	2723	5556
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5563	18.795	NaN	4983.2	30	0	2356.6	0.138	+			47741	VSGKRIPV	8	47	428.27364441666396	854.5327359001279	2	428.27398681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VSGKRIPV_	ENSG00000124467|ENST00000306511|PSG8	30.503639358989545	0.7238069182250283	2				NaN	NaN	0	NaN	2838	2723	5556
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5577	18.826	NaN	1569100	30	0	265590	0.214	+			2972	ASFDKAKLK	9	151	504.29775537836235	1006.5809578235247	2	504.2977600097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASFDKAKLK_	ENSG00000034510|ENST00000233143|TMSB10	95.81516180277367	0.04847050768394289	2				NaN	NaN	0	NaN	2849	2726	5576
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5578	18.83	NaN	57152	30	0	10897	0.106	+			39440	STEKIYIRK	9	91	379.892333984375	NaN	0	379.892333984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STEKIYIRK_	ENSG00000120798|ENST00000333003|NR2C1;ENSG00000177463|ENST00000425241|NR2C2;ENST00000475707.5_1_3:15045421-15079667:+|nuORF;nc|ENSG00000120798|P13056-2|NR2C1;nc|ENSG00000120798|P13056-3|NR2C1;nc|ENSG00000177463|P49116-2|NR2C2;NR2C2|p.F563Lfs*10|1|0.4|ENSG00000177463|chr3:15042899-15042899|T/-|frameshift_variant	96.0336014099291	0.029433397039169355	2				NaN	NaN	0	NaN	2850	2726	5576
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5579	18.832	NaN	69359	30	0	32783	0.106	+			14440	GTATTMVSK	9	90	448.2304992675781	NaN	0	448.2304992675781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTATTMVSK_	ENSG00000204217|ENST00000374580|BMPR2	138.06239232086	0.0004957345888817657	2				NaN	NaN	0	NaN	2851	2726	5576
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5580	18.834	NaN	18826	30	0	2421.2	0.106	+			15961	HAHVDKVTY	9	78	535.2750244140625	NaN	0	535.2750244140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HAHVDKVTY_	ENSG00000181396|ENST00000313056|OGFOD3;nc|ENSG00000181396|Q6PK18-2|OGFOD3	132.757866228626	0.00016231815605623974	2				NaN	NaN	0	NaN	2852	2726	5576
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5581	18.835	NaN	29601	30	0	3500.3	0.106			+	22839	KVICPILKI	9	93	513.8429565429688	NaN	0	513.8429565429688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KVICPILKI_	REV__tr|U7SRQ3|U7SRQ3_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01623PE=4SV=1	67.49366992349736	0.1173583512313808	2				NaN	NaN	0	NaN	2853	2726	5576
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5582	18.837	NaN	3384.3	30	0	797.54	0.106	+			37200	SKDTSGKPV	9	66	459.7479248046875	NaN	0	459.7479248046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SKDTSGKPV_	ENSG00000133056|ENST00000684373|PIK3C2B;PIK3C2B|p.C561Afs*18|1|0.5|ENSG00000133056|chr1:204457761-204457761|G/-|frameshift_variant	40.77816245573522	0.2702456086868081	2				NaN	NaN	0	NaN	2854	2726	5576
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5583	18.839	NaN	1257.1	30	0	81.059	0.036	+			24760	LHVVAAHLEL	10	56	551.3225708007812	NaN	0	551.3225708007812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LHVVAAHLEL_	ENSG00000129566|ENST00000262715|TEP1;ENST00000557314.5_1_14:20839728-20850189:-|nuORF;nc|ENSG00000129566|Q99973-2|TEP1;TEP1|p.K1597Sfs*14|1|0.27|ENSG00000129566|chr14:20380448-20380448|T/-|frameshift_variant;TEP1|p.V1856Lfs*45|3|0.41|ENSG00000129566|chr14:20378179-20378179|C/-|frameshift_variant	35.15202426646627	0.38475398474706135	2				NaN	NaN	0	NaN	2855	2726	5576
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5605	18.888	NaN	151760	30	0	41616	0.102	+			40296	STSSPYVSK	9	83	478.2399564560212	954.4653599788425	2	478.23992919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STSSPYVSK_	ENSG00000137501|ENST00000359152|SYTL2;ENST00000438197.2_1_11:85444955-85468786:-|nuORF;nc|ENSG00000137501|Q9HCH5-13|SYTL2;nc|ENSG00000137501|Q9HCH5-14|SYTL2;nc|ENSG00000137501|Q9HCH5-15|SYTL2;nc|ENSG00000137501|Q9HCH5-6|SYTL2;nc|ENSG00000137501|Q9HCH5|SYTL2;SYTL2|p.Q663Tfs*35|1|0.14|ENSG00000137501|chr11:85709344-85709345|-/T|frameshift_variant	163.1509380574825	0.003936019289634439	2				NaN	NaN	0	NaN	2871	2732	5604
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5612	18.907	NaN	78532	30	0	17430	0.214	+			3726	ATAAVSSMK	9	82	433.2254431203068	864.4363333074136	2	433.2259216308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATAAVSSMK_	ADD3-MXI1|1|fusion;ENSG00000148700|ENST00000356080|ADD3;nc|ENSG00000148700|Q9UEY8-2|ADD3	172.24860141594272	0.002383092361811508	2				NaN	NaN	0	NaN	2875	2735	5611
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5613	18.91	NaN	16939	30	0	2635.7	0.106			+	-1	MALMQQEGGS	10	72	534.2276194643778	1066.4406859955554	2	534.2291259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_MALM(Oxidation (M))QQEGGS_	REV__tr|U7T5R3|U7T5R3_FUSNUBranched-chainaminoacidtransportsystemATP-bindingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00054PE=3SV=1	51.19269402634007	0.44601001148513897	2				NaN	NaN	0	NaN	2876	2735	5611
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5614	18.912	NaN	7344.7	30	0	2151.9	0.106			+	42410	TAKLMWQPRK	10	52	420.2413913961396	1257.7023447886188	3	420.241943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TAKLMWQPRK_	REV__RYR1|p.D2713Tfs*33|1|0.11|ENSG00000196218|chr19:38504811-38504811|C/-|frameshift_variant	30.568863376406313	0.6301935916953115	2				NaN	NaN	0	NaN	2877	2735	5611
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5615	18.914	NaN	6766.3	30	0	1330.2	0.106			+	21056	KKLAKWTD	8	71	495.2911029336299	988.5676529340598	2	495.2922668457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KKLAKWTD_	REV__CCDC180|p.K1351Sfs*28|1|0.14|ENSG00000197816|chr9:97364063-97364063|C/-|frameshift_variant;REV__CCDC180|p.K1583Nfs*17|3|0.32|ENSG00000197816|chr9:97374551-97374551|C/-|frameshift_variant;REV__CCDC180|p.L667Tfs*8|1|0.13|ENSG00000197816|chr9:97330353-97330354|-/A|frameshift_variant;REV__CCDC180|p.S1054Lfs*19|1|0.44|ENSG00000197816|chr9:97354591-97354591|T/-|frameshift_variant;REV__ENSG00000197816|ENST00000529487|CCDC180;REV__ENST00000375206.6_1_9:100053158-100139173:+|nuORF;REV__ENST00000460482.6_1_9:100070037-100107975:+|nuORF;REV__ENST00000494917.6_1_9:100069637-100105846:+|nuORF;REV__ENST00000529787.2_1_9:100053158-100088872:+|nuORF;REV__nc|ENSG00000197816|Q9P1Z9|CCDC180	60.97194046774394	0.49215940876911696	2				NaN	NaN	0	NaN	2878	2735	5611
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5616	18.916	NaN	5085.4	30	0	1030.7	0.106			+	1581	AGIRVNIESA	10	68	515.289206870093	1028.563860806986	2	515.2883911132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AGIRVNIESA_	REV__tr|U7SZH4|U7SZH4_FUSNUHelicaseATP-bindingdomain-containingprotein(Fragment)OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00871PE=4SV=1	42.396135135203025	0.5270658956260207	2				NaN	NaN	0	NaN	2879	2735	5611
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5617	18.918	NaN	5878.8	30	0	923.51	0.106	+			37686	SLSESSPPK	9	70	466.2395693583347	930.4645857834694	2	466.2402038574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLSESSPPK_	ENSG00000050405|ENST00000341247|LIMA1;LIMA1|p.T536Lfs*38|2|0.4|ENSG00000050405|chr12:50177739-50177739|G/-|frameshift_variant;nc|ENSG00000050405|Q9UHB6-2|LIMA1;nc|ENSG00000050405|Q9UHB6-3|LIMA1;nc|ENSG00000050405|Q9UHB6-4|LIMA1;nc|ENSG00000050405|Q9UHB6-5|LIMA1	67.49366992349736	0.1516260258713357	2				NaN	NaN	0	NaN	2880	2735	5611
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5618	18.919	NaN	9216.7	30	0	1115.8	0.035			+	22073	KSLDSELGVP	10	81	522.7835678195049	1043.5525827058098	2	522.7858276367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KSLDSELGVP_	REV__ENSG00000159314|ENST00000685559|ARHGAP27;REV__nc|ENSG00000159314|Q6ZUM4-2|ARHGAP27;REV__nc|ENSG00000159314|Q6ZUM4-3|ARHGAP27	84.9155231211612	0.16018353804806162	2				NaN	NaN	0	NaN	2881	2735	5611
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5631	18.946	NaN	49914	30	0	20231	0.214	+			4730	ATMKTELQK	9	85	525.2860945352006	1048.5576361372011	2	525.2872314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATMKTELQK_	ENSG00000096696|ENST00000379802|DSP;nc|ENSG00000096696|P15924-2|DSP;nc|ENSG00000096696|P15924-3|DSP	167.22876102047192	0.0032399547248545047	2				NaN	NaN	0	NaN	2891	2738	5630
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5632	18.95	NaN	23606	30	0	3452.5	0.106	+			6256	AVSKLYASK	9	85	483.7843136275698	965.5540743219397	2	483.7846984863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVSKLYASK_	ENSG00000115561|ENST00000263856|CHMP3;ENST00000466032.1_1_2:86754275-86769420:-|nuORF;nc|ENSG00000115561|Q9Y3E7-2|CHMP3;nc|ENSG00000115561|Q9Y3E7-3|CHMP3	154.0112374973812	0.005934173778894772	2				NaN	NaN	0	NaN	2892	2738	5630
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5633	18.952	NaN	31916	30	0	11390	0.106			+	5185	ATTLKACTLA	10	66	350.5265822373258	1048.5579173121773	3	350.5268249511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_ATTLKAC(Carbamidomethyl (C))TLA_	REV__ENSG00000126749|ENST00000599672|EMG1	53.08895987439943	0.42869529153390606	2				NaN	NaN	0	NaN	2893	2738	5630
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5634	18.954	NaN	21207	30	0	9404.4	0.106			+	24189	LEQEQPGVQL	10	68	380.86778455309275	1139.5815242594783	3	380.86810302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LEQEQPGVQL_	REV__ENSG00000061273|ENST00000080059|HDAC7;REV__ENST00000425451.2_1_12:48189548-48213588:-|nuORF;REV__HDAC7|p.M769Wfs*12|1|0.42|ENSG00000061273|chr12:47787744-47787744|G/-|frameshift_variant;REV__nc|ENSG00000061273|Q8WUI4-3|HDAC7;REV__nc|ENSG00000061273|Q8WUI4-4|HDAC7;REV__nc|ENSG00000061273|Q8WUI4-6|HDAC7;REV__nc|ENSG00000061273|Q8WUI4-7|HDAC7;REV__nc|ENSG00000061273|Q8WUI4-8|HDAC7;REV__nc|ENSG00000061273|Q8WUI4|HDAC7	44.377184641726394	0.5088115166961078	2				NaN	NaN	0	NaN	2894	2738	5630
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5635	18.955	NaN	5244.6	30	0	1121.3	0.106	+			4070	ATDKSFVEK	9	76	512.7692860100912	NaN	0	512.7695922851562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATDKSFVEK_	ENSG00000100345|ENST00000216181|MYH9;ENSG00000105357|ENST00000642316|MYH14;ENSG00000133392|ENST00000300036|MYH11;MYH14|p.L1950Sfs*14|1|0.34|ENSG00000105357|chr19:50309646-50309646|C/-|frameshift_variant;MYH14|p.M997*|1|0.19|ENSG00000105357|chr19:50271483-50271483|A/-|frameshift_variant;MYH14|p.R929Gfs*44|1|0.38|ENSG00000105357|chr19:50268237-50268237|G/-|frameshift_variant;MYH9|p.I784*|1|0.07|ENSG00000100345|chr22:36304036-36304036|G/-|frameshift_variant;nc|ENSG00000100345|P35579-2|MYH9;nc|ENSG00000105357|Q7Z406-4|MYH14;nc|ENSG00000105357|Q7Z406-5|MYH14;nc|ENSG00000105357|Q7Z406-6|MYH14;nc|ENSG00000105357|Q7Z406|MYH14;nc|ENSG00000133392|P35749-2|MYH11;nc|ENSG00000133392|P35749-3|MYH11;nc|ENSG00000133392|P35749-4|MYH11	46.45678178249821	0.2311111838007999	2				NaN	NaN	0	NaN	2895	2738	5630
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5636	18.957	NaN	4201.9	30	0	936.93	0.037	+			7384	DDVFVFNVQ	9	47	361.50982427112467	1081.507643413574	3	361.5104064941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DDVFVFNVQ_	CELSR1|p.G1602Vfs*104|1|0.17|ENSG00000075275|chr22:46410526-46410526|C/-|frameshift_variant;CELSR1|p.I2650Sfs*5|1|0.42|ENSG00000075275|chr22:46369187-46369187|T/-|frameshift_variant;CELSR1|p.R2275Qfs*18|1|0.18|ENSG00000075275|chr22:46384603-46384604|-/G|frameshift_variant;CELSR1|p.T1849Rfs*8|2|0.25|ENSG00000075275|chr22:46397831-46397831|C/-|frameshift_variant;ENSG00000075275|ENST00000674500|CELSR1;nc|ENSG00000075275|Q9NYQ6-2|CELSR1;nc|ENSG00000075275|Q9NYQ6|CELSR1	40.5726180659479	0.4135428067754104	2				NaN	NaN	0	NaN	2896	2738	5630
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5637	18.958	NaN	7750.3	30	0	1290.8	0.142	+			18419	ISAKAATCFAE	11	63	371.18595357292503	1110.5360313189751	3	371.1863098144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ISAKAATCFAE_	ENSG00000118804|ENST00000237642|STBD1	39.873155843976775	0.5596786644756743	2				NaN	NaN	0	NaN	2897	2738	5630
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5650	18.987	NaN	15461	30	0	3882.4	0.214	+			40092	STNSPVGVSK	10	70	488.2586323256854	974.5027117181709	2	488.259033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STNSPVGVSK_	ENSG00000165671|ENST00000439151|NSD1;nc|ENSG00000165671|Q96L73-2|NSD1;nc|ENSG00000165671|Q96L73-3|NSD1;NSD1|p.K1753Sfs*10|1|0.17|ENSG00000165671|chr5:177267669-177267669|A/-|frameshift_variant	115.23196543181992	0.034063879665207575	2				NaN	NaN	0	NaN	2907	2741	5649
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5651	18.99	NaN	5743.8	30	0	759.72	0.106	+			19984	KEIDKEEHL	9	68	570.7982285326017	1139.5819041320033	2	570.7991333007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEIDKEEHL_	ENSG00000154545|ENST00000471932|MAGED4;ENSG00000179222|ENST00000326587|MAGED1;ENSG00000187243|ENST00000335504|MAGED4B;ENST00000470594.5_1_X:51805328-51809606:-|nuORF;ENST00000479281.5_1_X:51931784-51932886:+|nuORF;ENST00000485420.5_1_X:51636757-51640983:+|nuORF;ENST00000494718.5_1_X:51640434-51640983:+|nuORF;MAGED1|p.P628Rfs*18|1|0.09|ENSG00000179222|chrX:51900215-51900215|C/-|frameshift_variant;nc|ENSG00000179222|Q9Y5V3-2|MAGED1;nc|ENSG00000187243|Q96JG8-2|MAGED4;nc|ENSG00000187243|Q96JG8-4|MAGED4	134.7655990226056	0.012935733000282069	2				NaN	NaN	0	NaN	2908	2741	5649
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5652	18.992	NaN	11549	30	0	5369.6	0.106			+	8924	EEVPHEPPFM	10	65	606.2733368984319	1210.5321208636637	2	606.2741088867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EEVPHEPPFM_	REV__ENSG00000128731|ENST00000261609|HERC2;REV__ENST00000428453.5_1_15:20588586-20667676:-|nuORF;REV__ENST00000430598.5_1_15:20613931-20667676:-|nuORF;REV__ENST00000524476.5_1_15:28882105-28886289:+|nuORF;REV__ENST00000529353.1_1_15:28878360-28886587:+|nuORF;REV__ENST00000529624.5_3_15:28877823-28916776:+|nuORF;REV__ENST00000562687.6_3_16:32769598-32772029:+|nuORF;REV__HERC2|p.G2202Afs*8|1|0.2|ENSG00000128731|chr15:28213923-28213923|C/-|frameshift_variant;REV__nc|ENSG00000290376|Q9BVR0|HERC2P3	82.7504851949679	0.1731497355276012	2				NaN	NaN	0	NaN	2909	2741	5649
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5653	18.994	NaN	19878	30	0	1547.1	0.106	+			20911	KITLLHRTQ	9	74	370.564136369258	1108.670579707974	3	370.5645751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KITLLHRTQ_	MTDH|p.K447Rfs*19|1|0.29|ENSG00000147649|chr8:97713722-97713722|A/-|frameshift_variant	53.08895987439943	0.27122541748218487	2				NaN	NaN	0	NaN	2910	2741	5649
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5654	18.996	NaN	22561	30	0	4418.7	0.106	+			40139	STQIVANAK	9	78	466.2634650230377	930.5123771128755	2	466.2638854980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STQIVANAK_	ENSG00000147872|ENST00000276914|PLIN2;PLIN2|p.V348*|1|0.15|ENSG00000147872|chr9:19116520-19116520|C/-|frameshift_variant	114.8945686534367	0.024290463251177924	2				NaN	NaN	0	NaN	2911	2741	5649
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5655	18.998	NaN	15052	30	0	1219.1	0.106			+	45348	TVSRSIGAL	9	80	452.2648662397286	902.5151795462572	2	452.2664489746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TVSRSIGAL_	REV__DUSP6|p.T304I|1|0.26|ENSG00000139318|chr12:89349489-89349489|G/A|missense_variant;REV__DUSP6|p.V303A|1|0.2|ENSG00000139318|chr12:89349492-89349492|A/G|missense_variant;REV__ENSG00000139318|ENST00000279488|DUSP6;REV__ENSG00000164086|ENST00000495880|DUSP7;REV__nc|ENSG00000139318|Q16828-2|DUSP6;REV__nc|ENSG00000164086|Q16829-2|DUSP7	76.7741389293348	0.11149722112137898	2				NaN	NaN	0	NaN	2912	2741	5649
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5656	19	NaN	5174.7	30	0	785.27	0.036	+			13365	GLAIHQVLTK	10	61	360.5570505596359	1078.6493222791078	3	360.5574035644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GLAIHQVLTK_	ENSG00000125885|ENST00000610722|MCM8;nc|ENSG00000125885|Q9UJA3-2|MCM8;nc|ENSG00000125885|Q9UJA3-3|MCM8;nc|ENSG00000125885|Q9UJA3-4|MCM8	50.033510581677724	0.4566913063131936	2				NaN	NaN	0	NaN	2913	2741	5649
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5668	19.025	NaN	22222	30	0	2821.6	0.214	+			33050	REKELESIK	9	93	377.88336887444405	1130.6282772235322	3	377.88360595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_REKELESIK_	ENSG00000161791|ENST00000335154|FMNL3;nc|ENSG00000161791|Q8IVF7-2|FMNL3;nc|ENSG00000161791|Q8IVF7|FMNL3	63.53385203322761	0.18415635464017938	2				NaN	NaN	0	NaN	2922	2744	5667
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5669	19.028	NaN	21451	30	0	3314.3	0.106			+	43970	TPENLNQYLI	10	87	402.2122869908784	1203.6150315728353	3	402.2130126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TPENLNQYLI_	REV__ENSG00000127914|ENST00000356239|AKAP9;REV__ENST00000487258.5_1_7:91722364-91739470:+|nuORF;REV__ENST00000487692.1_1_7:91726485-91729288:+|nuORF;REV__nc|ENSG00000127914|Q99996-1|AKAP9;REV__nc|ENSG00000127914|Q99996-3|AKAP9;REV__nc|ENSG00000127914|Q99996-5|AKAP9;REV__nc|ENSG00000127914|Q99996-6|AKAP9	38.753607047826485	0.5606299674732264	2				NaN	NaN	0	NaN	2923	2744	5667
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5670	19.03	NaN	22929	30	0	3363.5	0.106				-1	 	0	71	451.73203284918816	901.4495127651763	2	451.7320556640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2924	2744	5667
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5671	19.032	NaN	5826.9	30	0	921.3	0.106	+			20199	KELEKTYSA	9	74	534.7815725086895	1067.5485920841788	2	534.7824096679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KELEKTYSA_	ENSG00000160789|ENST00000368300|LMNA;ENST00000496738.5_1_1:156104631-156105741:+|nuORF;nc|ENSG00000160789|P02545-2|LMNA;nc|ENSG00000160789|P02545-3|LMNA;nc|ENSG00000160789|P02545-4|LMNA;nc|ENSG00000160789|P02545-5|LMNA;nc|ENSG00000160789|P02545-6|LMNA	56.632244143249146	0.24168844994051353	2				NaN	NaN	0	NaN	2925	2744	5667
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5672	19.034	NaN	8437.1	30	0	1253.4	0.106	+			33044	REKEIKSEL	9	79	566.3217120817933	1130.6288712303865	2	566.3224487304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_REKEIKSEL_	ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC;PRKDC|p.K3681Nfs*6|1|0.32|ENSG00000253729|chr8:47785174-47785177|TTCT/-|frameshift_variant;PRKDC|p.M3670*|1|0.5|ENSG00000253729|chr8:47785212-47785212|T/-|frameshift_variant;PRKDC|p.M3846Cfs*12|1|0.13|ENSG00000253729|chr8:47779047-47779047|T/-|frameshift_variant;PRKDC|p.M4020Cfs*2|1|0.31|ENSG00000253729|chr8:47776968-47776968|T/-|frameshift_variant;PRKDC|p.N3605Kfs*3|1|0.22|ENSG00000253729|chr8:47788993-47788994|-/T|frameshift_variant;PRKDC|p.N4037Ifs*15|1|0.17|ENSG00000253729|chr8:47776916-47776916|T/-|frameshift_variant;PRKDC|p.S3402Ifs*16|1|0.04|ENSG00000253729|chr8:47799302-47799303|-/AAACCGTGAGTTAGAGGAGGTAA|frameshift_variant;PRKDC|p.S4099Qfs*6|1|0.25|ENSG00000253729|chr8:47774265-47774265|A/-|frameshift_variant;PRKDC|p.T3268Pfs*7|1|0.5|ENSG00000253729|chr8:47803426-47803426|T/-|frameshift_variant;PRKDC|p.W3401Cfs*4|1|0.01|ENSG00000253729|chr8:47799304-47799305|-/AATGAATA|frameshift_variant	104.42354056486148	0.0346881550498418	2				NaN	NaN	0	NaN	2926	2744	5667
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5673	19.036	NaN	8768.1	30	0	1670.7	0.106			+	8306	EAIRTRVP	8	74	471.2793253961292	940.5440978590584	2	471.77728271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EAIRTRVP_	REV__ENST00000420461.6_1_11:43333622-43342387:+|nuORF;REV__ENST00000534695.5_1_11:43333622-43340191:+|nuORF	37.15910966729921	0.6739408393984688	2				NaN	NaN	0	NaN	2927	2744	5667
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5674	19.037	NaN	5314.4	30	0	1120.4	0.033	+			13628	GMGLTRTR	8	65	446.2461634264442	890.4777739196884	2	446.2470397949219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GMGLTRTR_	chr2:127388998-127389111|452|13.27|0.0|20.34|+|2|MAP3K2-DT,MAP3K2-DT|1	35.200714571348534	0.6875396545722289	2				NaN	NaN	0	NaN	2928	2744	5667
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5687	19.065	NaN	36773	30	0	5403.5	0.214	+			34552	RVLEAIQKK	9	80	362.2324576486843	1083.675543546253	3	362.23272705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVLEAIQKK_	ENSG00000169375|ENST00000394947|SIN3A;SIN3A|p.G659Afs*26|1|0.14|ENSG00000169375|chr15:75396375-75396375|C/-|frameshift_variant	96.66504779109242	0.04607440320619715	2				NaN	NaN	0	NaN	2938	2747	5686
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5688	19.068	NaN	10903	30	0	1771.6	0.106	+			20138	KEKPEEESL	9	74	544.7765890106274	1087.5386250880547	2	544.777587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEKPEEESL_	ENSG00000148396|ENST00000684901|SEC16A;nc|ENSG00000148396|O15027-2|SEC16A;nc|ENSG00000148396|O15027-3|SEC16A;nc|ENSG00000148396|O15027-4|SEC16A;nc|ENSG00000148396|O15027-5|SEC16A;SEC16A|p.P2155Hfs*25|1|0.25|ENSG00000148396|chr9:136447664-136447664|G/-|frameshift_variant	98.58198989935565	0.04066992115528678	2				NaN	NaN	0	NaN	2939	2747	5686
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5689	19.07	NaN	3721	30	0	410.43	0.106	+			21449	KNEQERVL	8	63	508.2798050203979	1014.5450571075958	2	508.280029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KNEQERVL_	CCDC168|p.G4714Rfs*2|1|0.22|ENSG00000175820|chr13:102736557-102736558|-/T|frameshift_variant;CCDC168|p.G6141Lfs*25|1|0.03|ENSG00000175820|chr13:102732276-102732277|-/AGGAAAAATCACCAAACACTAG|frameshift_variant;CCDC168|p.K5937Nfs*10|1|0.37|ENSG00000175820|chr13:102732886-102732886|T/-|frameshift_variant;CCDC168|p.K6236Nfs*3|1|0.42|ENSG00000175820|chr13:102731989-102731989|T/-|frameshift_variant;CCDC168|p.L5048Ifs*6|1|0.12|ENSG00000175820|chr13:102735555-102735556|-/T|frameshift_variant;CCDC168|p.L5234*|1|0.12|ENSG00000175820|chr13:102735001-102735001|A/-|frameshift_variant;CCDC168|p.M5025Cfs*8|1|0.29|ENSG00000175820|chr13:102735624-102735624|T/-|frameshift_variant;CCDC168|p.T4543Lfs*5|1|0.1|ENSG00000175820|chr13:102737070-102737070|T/-|frameshift_variant;ENSG00000175820|ENST00000322527|CCDC168	53.351449002276354	0.5676011784961348	2				NaN	NaN	0	NaN	2940	2747	5686
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5690	19.072	NaN	11450	30	0	1036.9	0.106	+			19519	KAVNPGRSL	9	66	471.2793253961292	940.5440978590584	2	471.77862548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KAVNPGRSL_	ENSG00000103429|ENST00000261658|BFAR;nc|ENSG00000103429|Q9NZS9-2|BFAR	82.24051045832904	0.08786059719216216	2				NaN	NaN	0	NaN	2941	2747	5686
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5691	19.074	NaN	5051.3	30	0	726.71	0.106	+			16990	HPSHVQPAY	9	60	518.2532148354456	1034.4918767376912	2	518.2540283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HPSHVQPAY_	ATXN2|p.I1070T|1|0.42|ENSG00000204842|chr12:111470215-111470215|A/G|missense_variant;ENSG00000204842|ENST00000673436|ATXN2;ENST00000468920.2_1_12:111893805-111895209:-|nuORF;ENST00000482777.5_1_12:111893805-111908601:-|nuORF;nc|ENSG00000204842|Q99700-3|ATXN2;nc|ENSG00000204842|Q99700-4|ATXN2;nc|ENSG00000204842|Q99700-5|ATXN2;nc|ENSG00000204842|Q99700|ATXN2	82.24051045832904	0.08786059719216216	2				NaN	NaN	0	NaN	2942	2747	5686
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5692	19.076	NaN	19795	30	0	13200	0.038				-1	QEKEMLLRL	9	62	392.55263532677833	1174.636076580535	3	392.55322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_QEKEM(Oxidation (M))LLRL_	ENSG00000142207|ENST00000382751|URB1	51.19269402634007	0.2889735674168909	2				NaN	NaN	0	NaN	2943	2747	5686
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5693	19.076	NaN	12806	30	0	2973.9	0.143			+	44398	TSLLFCFDESG	11	57	406.8492740790476	1217.5259928373428	3	406.84991455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TSLLFCFDESG_	REV__CHD1|p.E1321Kfs*22|3|0.3|ENSG00000153922|chr5:98870705-98870705|T/-|frameshift_variant;REV__CHD1|p.E1321Rfs*17|1|0.48|ENSG00000153922|chr5:98870704-98870705|-/T|frameshift_variant;REV__CHD1|p.V947Tfs*15|1|0.21|ENSG00000153922|chr5:98882003-98882004|CT/-|frameshift_variant;REV__CHD2|p.D1266Mfs*19|1|0.06|ENSG00000173575|chr15:92997311-92997312|-/AC|frameshift_variant;REV__CHD2|p.L972Ffs*26|1|0.45|ENSG00000173575|chr15:92980849-92980850|-/T|frameshift_variant;REV__ENSG00000153922|ENST00000614616|CHD1;REV__ENSG00000173575|ENST00000394196|CHD2;REV__nc|ENSG00000153922|O14646-2|CHD1;REV__nc|ENSG00000173575|O14647-2|CHD2	31.529811441608018	0.6590691889962369	2				NaN	NaN	0	NaN	2944	2747	5686
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5705	19.104	NaN	4537.9	30	0	706.78	0.214	+			39997	STMSACASTAR	11	70	571.7492049281076	1141.483856923015	2	571.7503662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_STMSAC(Carbamidomethyl (C))ASTAR_	ENST00000566749.5_1_16:30094754-30094823:+|nuORF	128.3478880297481	0.0041339947484058445	2				NaN	NaN	0	NaN	2953	2750	5704
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5706	19.107	NaN	7382.6	30	0	1611	0.106			+	13541	GLSGGVLGK	9	54	394.2370010838632	786.4594492345265	2	394.2372741699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GLSGGVLGK_	REV__ENSG00000214787|ENST00000651255|MS4A4E	79.45101966838831	0.09992237243120712	2				NaN	NaN	0	NaN	2954	2750	5704
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5707	19.109	NaN	7947.7	30	0	1976	0.106	+			15275	GTTRFAHLK	9	52	344.1988763702675	NaN	0	344.19793701171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTTRFAHLK_	ENSG00000121210|ENST00000409959|TMEM131L;nc|ENSG00000121210|A2VDJ0-2|TMEM131L;nc|ENSG00000121210|A2VDJ0-6|TMEM131L;nc|ENSG00000121210|A2VDJ0|TMEM131L	34.172542307311794	0.30503706118289736	2				NaN	NaN	0	NaN	2955	2750	5704
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5708	19.111	NaN	9696.8	30	0	1798.8	0.106	+			39986	STMPHTSGMNR	11	73	609.7710914742056	1217.5276300152111	2	609.7716064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STMPHTSGMNR_	ENSG00000150907|ENST00000379561|FOXO1	91.26522074875469	0.0935951923676557	2				NaN	NaN	0	NaN	2956	2750	5704
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5709	19.113	NaN	2083.5	30	0	338.79	0.106	+			12507	GEENGAHTI	9	63	464.2113498027638	926.4081466723276	2	464.2117919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GEENGAHTI_	ENSG00000177565|ENST00000457928|TBL1XR1	51.19269402634007	0.2889735674168909	2				NaN	NaN	0	NaN	2957	2750	5704
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5710	19.115	NaN	5160.9	30	0	997.57	0.106	+			880	AEHHVATL	8	64	439.2298377527341	876.4451225722682	2	439.2297668457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEHHVATL_	ENSG00000117399|ENST00000310955|CDC20;ENST00000488829.1_1_9:89626569-89628063:+|nuORF	76.84663266511073	0.3498490246073164	2				NaN	NaN	0	NaN	2958	2750	5704
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5711	19.117	NaN	6680.8	30	0	2047.2	0.039	+			34710	RVVDGKDLTTK	11	54	411.23798254093373	1230.6921182230012	3	411.2384033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RVVDGKDLTTK_	ENSG00000144554|ENST00000675286|FANCD2;ENST00000438741.1_1_3:10076402-10082221:+|nuORF;FANCD2|p.I1249Nfs*2|1|0.48|ENSG00000144554|chr3:10090346-10090347|-/A|frameshift_variant;FANCD2|p.N890Ifs*14|1|0.36|ENSG00000144554|chr3:10073312-10073312|A/-|frameshift_variant;nc|ENSG00000144554|Q9BXW9-1|FANCD2;nc|ENSG00000144554|Q9BXW9-3|FANCD2;nc|ENSG00000144554|Q9BXW9-4|FANCD2	27.553686687779056	0.7007754949956778	2				NaN	NaN	0	NaN	2959	2750	5704
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5726	19.148	NaN	235300	30	0	91879	0.215				-1	 	0	101	417.2393034544931	832.4640539757862	2	417.2398986816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2971	2753	5725
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5727	19.152	NaN	53615	30	0	19379	0.106	+			7912	DSEGSTKVL	9	94	468.23752368892036	934.4604944446407	2	468.2374572753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DSEGSTKVL_	ENSG00000185658|ENST00000342449|BRWD1;nc|ENSG00000185658|Q9NSI6-3|BRWD1;nc|ENSG00000185658|Q9NSI6|BRWD1	85.16082228582465	0.07850854922700509	2				NaN	NaN	0	NaN	2972	2753	5725
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5728	19.154	NaN	21864	30	0	7787.1	0.106	+			39827	STLKIMEMSI	10	63	384.871340366261	1151.592191698983	3	384.87176513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STLKIMEMSI_	ENSG00000042317|ENST00000393545|SPATA7;ENST00000556666.5_1_14:88883017-88904763:+|nuORF;nc|ENSG00000042317|Q9P0W8-2|SPATA7;nc|ENSG00000042317|Q9P0W8-3|SPATA7	28.081489160057373	0.6505064946289502	2				NaN	NaN	0	NaN	2973	2753	5725
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5729	19.156	NaN	2737.4	30	0	303.5	0.106				-1	QGGSCYTKR	9	68	528.7471577092848	1055.4797624853695	2	528.74853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_QGGSC(Carbamidomethyl (C))YTKR_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	47.657333605630114	0.33044192980041115	2				NaN	NaN	0	NaN	2974	2753	5725
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5730	19.157	NaN	7048.9	30	0	1203.2	0.106	+			39868	STLPKPVQK	9	73	499.30525143106587	996.5959499289318	2	499.3056335449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STLPKPVQK_	ENSG00000040341|ENST00000524300|STAU2;ENST00000521293.5_1_8:74529642-74659041:-|nuORF;ENST00000522962.5_1_8:74566130-74621380:-|nuORF;ENST00000524113.5_1_8:74585313-74650536:-|nuORF;nc|ENSG00000040341|Q9NUL3-2|STAU2;nc|ENSG00000040341|Q9NUL3-3|STAU2;nc|ENSG00000040341|Q9NUL3-5|STAU2;nc|ENSG00000040341|Q9NUL3-8|STAU2;STAU2|p.C491Lfs*31|1|0.39|ENSG00000040341|chr8:73552072-73552073|-/G|frameshift_variant;STAU2|p.F158Lfs*16|1|0.27|ENSG00000040341|chr8:73617388-73617388|A/-|frameshift_variant;STAU2|p.K274Nfs*22|1|0.09|ENSG00000040341|chr8:73613813-73613813|T/-|frameshift_variant;STAU2|p.K410Ifs*9|1|0.07|ENSG00000040341|chr8:73552313-73552314|-/A|frameshift_variant;STAU2|p.L259Tfs*15|2|0.48|ENSG00000040341|chr8:73613860-73613861|-/T|frameshift_variant	88.17693792209575	0.07000514020414955	2				NaN	NaN	0	NaN	2975	2753	5725
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5731	19.159	NaN	8097	30	0	1621.7	0.034	+			20403	KETGGVEKL	9	69	480.77079440904555	959.5270358848911	2	480.77130126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KETGGVEKL_	ENSG00000164754|ENST00000297338|RAD21	140.11223852658463	0.010427410095706195	2				NaN	NaN	0	NaN	2976	2753	5725
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5732	19.16	NaN	9618.5	30	0	3587.2	0.143			+	-1	PLATEGLHSC	10	69	362.17422927924355	1083.5008584379307	3	362.1745910644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_PLATEGLHSC(Carbamidomethyl (C))_	REV__FOXP4|p.K267Rfs*100|2|0.24|ENSG00000137166|chr6:41587433-41587433|C/-|frameshift_variant	47.95952297671804	0.47580206326914537	2				NaN	NaN	0	NaN	2977	2753	5725
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5748	19.192	NaN	60650	30	0	23617	0.212	+			2973	ASFDKAKLK	9	78	504.29775537836235	1006.5809578235247	2	504.2977294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASFDKAKLK_	ENSG00000034510|ENST00000233143|TMSB10	159.27591364854348	0.004707062175358555	2				NaN	NaN	0	NaN	2990	2756	5747
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5749	19.195	NaN	16775	30	0	7022	0.106	+			42881	TEHAHQVVV	9	70	510.2666775450954	1018.5188021569908	2	510.2670593261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEHAHQVVV_	ENSG00000071127|ENST00000499869|WDR1	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	2991	2756	5747
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5750	19.197	NaN	13674	30	0	1362.6	0.106	+			29662	PGLTGSKGV	9	84	408.2343299551614	814.4541069771228	2	408.23468017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PGLTGSKGV_	COL4A3|p.E935Nfs*16|1|0.1|ENSG00000169031|chr2:227284263-227284263|G/-|frameshift_variant;ENSG00000169031|ENST00000396578|COL4A3;nc|ENSG00000169031|Q01955-2|COL4A3;nc|ENSG00000169031|Q01955-3|COL4A3;nc|ENSG00000169031|Q01955-4|COL4A3;nc|ENSG00000169031|Q01955-5|COL4A3	42.396135135203025	0.392153681582562	2				NaN	NaN	0	NaN	2992	2756	5747
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5751	19.199	NaN	37993	30	0	8897.6	0.106				-1	RCALARVFGEL	11	92	431.2353672197049	1290.6842722593149	3	431.2373352050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_RC(Carbamidomethyl (C))ALARVFGEL_	ENSG00000064687|ENST00000263094|ABCA7;ENST00000531478.5_1_19:1064055-1065421:+|nuORF;nc|ENSG00000064687|Q8IZY2-2|ABCA7	33.03940026070387	0.6432348334061824	2				NaN	NaN	0	NaN	2993	2756	5747
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5752	19.201	NaN	10441	30	0	2859.2	0.106				-1	HIPFDFYLCEM	11	59	491.2177392484594	1470.6313883455782	3	491.2180480957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_HIPFDFYLC(Carbamidomethyl (C))EM_	ENSG00000143621|ENST00000361891|ILF2	18.531049691330335	0.7837198200183355	2				NaN	NaN	0	NaN	2994	2756	5747
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5753	19.203	NaN	4731.6	30	0	316.73	0.037	+			13252	GINLPPREIK	10	71	379.56429335158214	NaN	0	379.56427001953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GINLPPREIK_	ENST00000471834.1_1_6:152657861-152688565:-|nuORF	43.650786325866115	0.3457431322078509	2				NaN	NaN	0	NaN	2995	2756	5747
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5754	19.203	NaN	13863	30	0	1293.4	0.144	+			18628	ISTCRFAQRV	10	78	413.21997486644193	1236.6380951995259	3	413.2205505371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_ISTC(Carbamidomethyl (C))RFAQRV_	ENSG00000164627|ENST00000287152|KIF6;nc|ENSG00000164627|Q6ZMV9-3|KIF6	61.76455937419982	0.3497917639301274	2				NaN	NaN	0	NaN	2996	2756	5747
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5772	19.242	NaN	87922	30	0	12645	0.149	+			49321	VVSEKQFSK	9	85	526.2915678909741	1050.568582848748	2	526.2924194335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVSEKQFSK_	ENSG00000163584|ENST00000295830|RPL22L1	139.38205640894643	0.01076996779551382	2				NaN	NaN	0	NaN	3011	2759	5771
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5773	19.245	NaN	35437	30	0	2484.6	0.103			+	-1	ERLFTMCIPCA	11	85	466.55107000534883	1396.6313806162466	3	466.5512390136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_ERLFTMC(Carbamidomethyl (C))IPC(Carbamidomethyl (C))A_	REV__ENSG00000167333|ENST00000300747|TRIM68;REV__ENST00000532108.1_1_11:4623360-4626734:-|nuORF;REV__TRIM68|p.H390Tfs*6|1|0.36|ENSG00000167333|chr11:4600566-4600566|G/-|frameshift_variant	36.31764250033197	0.6083289427130232	2				NaN	NaN	0	NaN	3012	2759	5771
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5774	19.247	NaN	78127	30	0	20830	0.106				-1	 	0	96	431.2550350084435	860.495517083687	2	431.25531005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3013	2759	5771
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5775	19.248	NaN	23774	30	0	3956.2	0.106	+			746	AEDKPRAQL	9	79	514.279453452274	1026.5443539713478	2	514.280029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEDKPRAQL_	ENSG00000105656|ENST00000262809|ELL	122.1759843771914	0.019882474861609503	2				NaN	NaN	0	NaN	3014	2759	5771
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5776	19.25	NaN	34614	30	0	5929.1	0.106			+	31499	QLELDGLTQG	10	91	537.2771934619569	1072.5398339907138	2	537.2780151367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QLELDGLTQG_	REV__sp|P16785|LTP_HCMVALargetegumentproteindeneddylaseOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL48PE=1SV=1;REV__sp|Q6SW84|LTP_HCMVMLargetegumentproteindeneddylaseOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL48PE=3SV=1	85.16082228582465	0.15877915086237185	2				NaN	NaN	0	NaN	3015	2759	5771
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5777	19.252	NaN	23490	30	0	4714.5	0.106			+	26346	LSYTRTITP	9	81	351.1967179324527	1050.5683243975582	3	351.1970520019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSYTRTITP_	REV__ENSG00000106624|ENST00000223357|AEBP1;REV__nc|ENSG00000106624|Q8IUX7-2|AEBP1	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	3016	2759	5771
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5778	19.254	NaN	14734	30	0	3459.1	0.033	+			45689	VAAGISNIQ	9	81	436.7450991726811	871.4756454121622	2	436.745361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VAAGISNIQ_	CHIA|p.N312Mfs*68|1|0.24|ENSG00000134216|chr1:111319135-111319135|A/-|frameshift_variant;CON__Q95M17;ENSG00000134216|ENST00000369740|CHIA;nc|ENSG00000134216|Q9BZP6-2|CHIA;nc|ENSG00000134216|Q9BZP6-3|CHIA	76.7741389293348	0.11149722112137898	2				NaN	NaN	0	NaN	3017	2759	5771
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5794	19.287	NaN	115250	30	0	29204	0.214				-1	 	0	111	438.2503911680339	874.4862294028678	2	438.250732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3030	2762	5793
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5795	19.291	NaN	29716	30	0	7893.3	0.106			+	21955	KSAPDRMVV	9	76	501.77313049387476	1001.5317080545495	2	501.77349853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KSAPDRMVV_	REV__ENSG00000122566|ENST00000618183|HNRNPA2B1;REV__ENST00000463181.5_1_7:26232138-26237376:-|nuORF;REV__nc|ENSG00000122566|P22626|HNRNPA2B1	93.19546047674547	0.05585629608842056	2				NaN	NaN	0	NaN	3031	2762	5793
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5796	19.293	NaN	8611.3	30	0	951.38	0.106	+			13565	GLSVREAL	8	70	422.74744882779027	843.4803447223806	2	422.7478942871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GLSVREAL_	ENST00000471517.5_1_19:38845366-38853372:+|nuORF	73.97473282117947	0.3737790450121076	2				NaN	NaN	0	NaN	3032	2762	5793
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5797	19.295	NaN	30400	30	0	5835.4	0.106	+			22510	KTQAISISK	9	90	488.29495605066484	974.5753591681297	2	488.2952880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTQAISISK_	ENSG00000130787|ENST00000253083|HIP1R;ENST00000452196.6_1_12:123320097-123341792:+|nuORF;HIP1R|p.A781Pfs*24|1|0.19|ENSG00000130787|chr12:122859467-122859467|G/-|frameshift_variant;HIP1R|p.E1021Vfs*2|1|0.32|ENSG00000130787|chr12:122861412-122861445|AGAGGAGGTGGCCATCCGGCCCAGCACTGCCCCC/-|frameshift_variant;HIP1R|p.N345Mfs*4|3|0.29|ENSG00000130787|chr12:122855584-122855584|C/-|frameshift_variant;nc|ENSG00000130787|O75146-2|HIP1R	139.38205640894643	0.01076996779551382	2				NaN	NaN	0	NaN	3033	2762	5793
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5798	19.296	NaN	8565.9	30	0	934.97	0.106	+			41626	SVQRPGLAR	9	83	492.29040858120044	982.5662642292009	2	492.29083251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVQRPGLAR_	ENSG00000102901|ENST00000562787|CENPT;ENST00000562513.6_1_16:67862078-67865741:-|nuORF;ENST00000562947.5_1_16:67864542-67866179:-|nuORF;ENST00000565157.5_1_16:67864257-67867798:-|nuORF;ENST00000569862.5_1_16:67865068-67866179:-|nuORF;nc|ENSG00000102901|Q96BT3-2|CENPT	49.536043120802724	0.308405419312776	2				NaN	NaN	0	NaN	3034	2762	5793
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5799	19.298	NaN	36974	30	0	4291.4	0.038	+			26001	LSKMSLLATMA	11	69	389.21520771701313	1164.6237937512394	3	389.2156677246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSKMSLLATMA_	KIF5A|p.F34Sfs*72|1|0.38|ENSG00000155980|chr12:57550369-57550369|T/-|frameshift_variant	36.31764250033197	0.6083289427130232	2				NaN	NaN	0	NaN	3035	2762	5793
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5800	19.299	NaN	7117.9	30	0	2303.2	0.14			+	39840	STLLHTKVV	9	43	333.2059454473188	996.5960069421565	3	333.20623779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STLLHTKVV_	REV__ENST00000484572.1_1_6:45870949-45882153:-|nuORF	27.882242232435846	0.5426732730940306	2				NaN	NaN	0	NaN	3036	2762	5793
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5815	19.332	NaN	132350	30	0	47905	0.211	+			19298	KAGEVFIHK	9	97	514.7974505202027	1027.5803481072053	2	514.7980346679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAGEVFIHK_	ENSG00000147140|ENST00000276079|NONO;ENST00000486613.6_1_X:70504267-70513876:+|nuORF;ENST00000566277.2_1_16:69791529-69791679:-|nuORF;nc|ENSG00000147140|Q15233-2|NONO	171.33049012695201	0.0025398094975457087	2				NaN	NaN	0	NaN	3048	2765	5814
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5816	19.336	NaN	14060	30	0	1237.8	0.106	+			16523	HEVKEAQTL	9	83	527.7793763414641	1053.544199749728	2	527.7803344726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HEVKEAQTL_	ENSG00000127603|ENST00000564288|MACF1;MACF1|p.A5223Lfs*8|1|0.21|ENSG00000127603|chr1:39388486-39388486|G/-|frameshift_variant;MACF1|p.N4824Kfs*19|1|0.33|ENSG00000127603|chr1:39387292-39387293|-/A|frameshift_variant;MACF1|p.T4896Lfs*29|1|0.27|ENSG00000127603|chr1:39387507-39387507|A/-|frameshift_variant;nc|ENSG00000127603|Q9UPN3-2|MACF1;nc|ENSG00000127603|Q9UPN3-3|MACF1;nc|ENSG00000127603|Q9UPN3-4|MACF1;nc|ENSG00000127603|Q9UPN3-5|MACF1;nc|ENSG00000127603|Q9UPN3|MACF1	95.81516180277367	0.04847050768394289	2				NaN	NaN	0	NaN	3049	2765	5814
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5817	19.338	NaN	5009	30	0	803.65	0.106	+			1042	AEKMLKEKM	9	70	554.2977982984083	1106.5810436636166	2	554.2988891601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEKMLKEKM_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	125.71293069911285	0.017741295328254008	2				NaN	NaN	0	NaN	3050	2765	5814
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5818	19.34	NaN	4525.9	30	0	2222.4	0.106	+			44503	TSSQSLRKL	9	40	340.53268004308006	1018.5762107294402	3	340.5328369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TSSQSLRKL_	ENSG00000162711|ENST00000336119|NLRP3;ENST00000532083.1_1_1:247607259-247611803:+|nuORF;nc|ENSG00000162711|Q96P20-2|NLRP3;nc|ENSG00000162711|Q96P20-4|NLRP3;nc|ENSG00000162711|Q96P20-5|NLRP3;nc|ENSG00000162711|Q96P20-6|NLRP3;nc|ENSG00000162711|Q96P20|NLRP3	21.9598887501803	0.5980208138527809	2				NaN	NaN	0	NaN	3051	2765	5814
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5819	19.341	NaN	14512	30	0	2015.3	0.106	+			48262	VTDGPGNYK	9	83	475.73209029103015	949.4496276488603	2	475.732177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTDGPGNYK_	ATRN|p.P984Lfs*34|1|0.23|ENSG00000088812|chr20:3584079-3584079|C/-|frameshift_variant;ENSG00000088812|ENST00000262919|ATRN;nc|ENSG00000088812|O75882-2|ATRN;nc|ENSG00000088812|O75882-3|ATRN	104.74654710444128	0.034358562718640136	2				NaN	NaN	0	NaN	3052	2765	5814
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5820	19.343	NaN	13660	30	0	2802.2	0.039	+			21809	KRCKAKRLQK	10	75	420.26795940242937	1257.782048807488	3	420.26849365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KRCKAKRLQK_	ENSG00000112655|ENST00000230419|PTK7;ENST00000487673.5_1_6:43111066-43128616:+|nuORF;ENST00000493339.1_1_6:43111066-43112355:+|nuORF;nc|ENSG00000112655|Q13308-2|PTK7;nc|ENSG00000112655|Q13308-3|PTK7;nc|ENSG00000112655|Q13308-4|PTK7;nc|ENSG00000112655|Q13308-5|PTK7;nc|ENSG00000112655|Q13308-6|PTK7	47.95952297671804	0.47580206326914537	2				NaN	NaN	0	NaN	3053	2765	5814
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5821	19.344	NaN	8554.3	30	0	1504.1	0.142			+	45939	VARPSLPSLAP	11	74	369.8887564169251	NaN	0	369.88873291015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VARPSLPSLAP_	REV__ENSG00000156395|ENST00000369701|SORCS3	38.753607047826485	0.39270760338352134	2				NaN	NaN	0	NaN	3054	2765	5814
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5839	19.383	NaN	441820	30	0	265580	0.163	+			46926	VIYEKTIRK	9	90	383.9040301253366	1148.6902609762099	3	383.9044189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VIYEKTIRK_	ENSG00000124429|ENST00000262753|POF1B;nc|ENSG00000124429|Q8WVV4-1|POF1B;nc|ENSG00000124429|Q8WVV4-3|POF1B	68.78682469695295	0.14603441672067394	2				NaN	NaN	0	NaN	3069	2768	5838
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5840	19.386	NaN	12698	30	0	4382.7	0.106				-1	 	0	77	352.56531743472885	1054.6741229043866	3	352.5655822753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3070	2768	5838
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5841	19.388	NaN	15037	30	0	1297.3	0.106	+			48361	VTGYTIRK	8	72	469.2766820342533	936.5388111353067	2	469.2767639160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTGYTIRK_	ENST00000315366.7_1_4:114823012-114823069:-|nuORF	63.30626980617807	0.4690498839812213	2				NaN	NaN	0	NaN	3071	2768	5838
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5842	19.39	NaN	12316	30	0	3707.4	0.106	+			46885	VINILADALGP	11	66	365.88473741323594	1094.632382839908	3	365.885009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VINILADALGP_	ENSG00000117362|ENST00000369109|APH1A;ENST00000461320.5_1_1:150239547-150241394:-|nuORF;nc|ENSG00000117362|Q96BI3-2|APH1A;nc|ENSG00000117362|Q96BI3-3|APH1A	34.172542307311794	0.6313490974540716	2				NaN	NaN	0	NaN	3072	2768	5838
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5843	19.392	NaN	1994.5	30	0	235.42	0.106	+			27069	MAGAMSTTAK	10	55	484.73021004206163	967.4458671509233	2	484.7304382324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MAGAMSTTAK_	ENSG00000083937|ENST00000263780|CHMP2B;nc|ENSG00000083937|Q9UQN3-2|CHMP2B	67.49366992349736	0.29779660154124327	2				NaN	NaN	0	NaN	3073	2768	5838
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5844	19.393	NaN	10948	30	0	2920.5	0.106	+			22382	KTIEAGIGK	9	81	458.7760125280915	915.537472122983	2	458.77642822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KTIEAGIGK_	ENSG00000100852|ENST00000345122|ARHGAP5;ENST00000407916.2_1_7:55004007-55004829:+|nuORF;nc|ENSG00000100852|Q13017-2|ARHGAP5	74.1650062923329	0.12277912660386392	2				NaN	NaN	0	NaN	3074	2768	5838
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5845	19.395	NaN	2433.4	30	0	578.62	0.034			+	-1	TAHLGRCP	8	57	456.2283669944607	910.4421810557214	2	456.2285461425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_TAHLGRC(Carbamidomethyl (C))P_	REV__ENST00000602748.5_1_7:148497812-148498055:+|nuORF	37.15910966729921	0.6739408393984688	2				NaN	NaN	0	NaN	3075	2768	5838
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5859	19.424	NaN	47743	30	0	5384.4	0.214	+			16446	HESRQITQV	9	90	549.2879537783092	1096.5613546234183	2	549.2892456054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HESRQITQV_	ENSG00000104695|ENST00000221138|PPP2CB;ENSG00000113575|ENST00000481195|PPP2CA;ENSG00000119414|ENST00000373547|PPP6C;ENSG00000149923|ENST00000279387|PPP4C;ENST00000566749.5_1_16:30094185-30096380:+|nuORF;ENST00000567040.5_1_16:30087698-30094972:+|nuORF;nc|ENSG00000113575|P67775-2|PPP2CA;nc|ENSG00000119414|O00743-2|PPP6C;nc|ENSG00000119414|O00743-3|PPP6C	163.1509380574825	0.003936019289634439	2				NaN	NaN	0	NaN	3086	2771	5858
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5860	19.428	NaN	2303.9	30	0	260.58	0.106			+	6360	AVTTKSVAAAV	11	56	509.3000392720381	1016.5855256108762	2	509.3006286621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVTTKSVAAAV_	REV__SLC25A31|p.A37T|1|0.17|ENSG00000151475|chr4:127730654-127730654|G/A|missense_variant	56.43379154798735	0.3552884390983883	2				NaN	NaN	0	NaN	3087	2771	5858
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5861	19.43	NaN	4701.8	30	0	529.77	0.106	+			34485	RVDGPASNLK	10	72	528.7914099459291	1055.5682669586581	2	528.7938842773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RVDGPASNLK_	COL6A3|p.A2956Lfs*45|1|0.33|ENSG00000163359|chr2:237336234-237336234|C/-|frameshift_variant;COL6A3|p.A2957Lfs*44|1|0.33|ENSG00000163359|chr2:237336232-237336232|A/-|frameshift_variant;COL6A3|p.G1770Vfs*12|1|0.05|ENSG00000163359|chr2:237366878-237366879|-/TGGTGTAA|frameshift_variant;COL6A3|p.G2207Efs*35|1|0.22|ENSG00000163359|chr2:237354908-237354908|G/-|frameshift_variant;COL6A3|p.G3016Vfs*19|1|0.34|ENSG00000163359|chr2:237334810-237334810|G/-|frameshift_variant;COL6A3|p.P2319Qfs*12|1|0.06|ENSG00000163359|chr2:237348359-237348359|G/-|frameshift_variant;COL6A3|p.V1771Sfs*8|3|0.08|ENSG00000163359|chr2:237366876-237366876|C/-|frameshift_variant;ENSG00000163359|ENST00000295550|COL6A3;nc|ENSG00000163359|P12111-2|COL6A3;nc|ENSG00000163359|P12111-3|COL6A3;nc|ENSG00000163359|P12111-4|COL6A3;nc|ENSG00000163359|P12111-5|COL6A3	128.3478880297481	0.01553957493207534	2				NaN	NaN	0	NaN	3088	2771	5858
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5862	19.432	NaN	6249.5	30	0	918.64	0.106	+			48979	VVGGVLPNG	9	52	406.23675957137476	810.4589662095495	2	406.23736572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVGGVLPNG_	nc|ENSG00000240268|A6NHM9|MOXD2P	42.47446043378293	0.39123495718708534	2				NaN	NaN	0	NaN	3089	2771	5858
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5863	19.433	NaN	3091.3	30	0	375.48	0.106	+			24458	LGFPNLWGG	9	63	480.7494937072828	959.4844344813656	2	480.75006103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LGFPNLWGG_	ENST00000473270.1_1_9:33016115-33025020:-|nuORF	50.0245360154114	0.3026755932229825	2				NaN	NaN	0	NaN	3090	2771	5858
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5864	19.435	NaN	3302.9	30	0	618.23	0.106	+			36103	SEKKDPPQL	9	60	521.2817526094491	1040.548952285698	2	521.2830200195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SEKKDPPQL_	ENSG00000100578|ENST00000652326|KIAA0586;ENST00000538571.6_1_14:58909433-59003756:+|nuORF;KIAA0586|p.P1497Lfs*6|1|0.11|ENSG00000100578|chr14:58547816-58547816|C/-|frameshift_variant;nc|ENSG00000100578|Q9BVV6-2|KIAA0586;nc|ENSG00000100578|Q9BVV6-3|KIAA0586;nc|ENSG00000100578|Q9BVV6-4|KIAA0586;nc|ENSG00000100578|Q9BVV6|KIAA0586	49.536043120802724	0.308405419312776	2				NaN	NaN	0	NaN	3091	2771	5858
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5865	19.437	NaN	9502.4	30	0	2149.2	0.036			+	18475	ISFKDGKKK	9	68	525.8183058812034	1049.6220588292067	2	525.81982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ISFKDGKKK_	REV__tr|U7T232|U7T232_FUSNUMethylenetetrahydrofolatereductaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00452PE=3SV=1	48.601550744091256	0.3193666407755445	2				NaN	NaN	0	NaN	3092	2771	5858
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5877	19.463	NaN	19173	30	0	6203.6	0.214	+			45163	TVMDKTRAL	9	77	525.7835695254433	1049.5525861176866	2	525.7844848632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_TVM(Oxidation (M))DKTRAL_	CARD17-CASP1|1|fusion;CARD17-CASP1|2|fusion;CASP1|p.N205Ifs*7|1|0.4|ENSG00000137752|chr11:105030343-105030343|T/-|frameshift_variant;ENSG00000137752|ENST00000533400|CASP1;ENSG00000204397|ENST00000673097|CARD16;ENST00000526511.5_1_11:104901858-104905840:-|nuORF;ENST00000527065.1_1_11:104915107-104915377:-|nuORF;nc|ENSG00000137752|P29466-2|CASP1;nc|ENSG00000204397|Q5EG05|CARD16	78.26377905018397	0.10505600812668463	2				NaN	NaN	0	NaN	3101	2774	5876
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5878	19.466	NaN	12459	30	0	2613	0.106	+			904	AEIAVGSRI	9	77	458.26614123243934	914.5177295316787	2	458.26629638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEIAVGSRI_	ENST00000434764.1_1_2:105486345-105489033:-|nuORF	87.69643885390035	0.07135982304947239	2				NaN	NaN	0	NaN	3102	2774	5876
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5879	19.468	NaN	4854.1	30	0	657.23	0.106	+			19988	KEIDTSTKV	9	65	510.7811457897345	1019.5477386462691	2	510.7822570800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEIDTSTKV_	ENSG00000139687|ENST00000267163|RB1;ENST00000525036.1_1_13:48877982-48934322:+|nuORF;RB1|p.L561Mfs*9|1|0.07|ENSG00000139687|chr13:48381428-48381432|CCTTG/-|frameshift_variant;RB1|p.V654Cfs*4|1|0.33|ENSG00000139687|chr13:48456343-48456343|A/-|frameshift_variant;RB1|p.Y529*|1|0.23|ENSG00000139687|chr13:48381334-48381335|AC/-|frameshift_variant;RB1|p.Y529Tfs*3|1|0.08|ENSG00000139687|chr13:48381329-48381329|T/-|frameshift_variant	96.0336014099291	0.047854655524928534	2				NaN	NaN	0	NaN	3103	2774	5876
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5880	19.47	NaN	10650	30	0	2396.5	0.106			+	-1	VDYMRNKGSF	10	54	411.52851818900837	1231.5637251672251	3	411.5289611816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_VDYM(Oxidation (M))RNKGSF_	REV__ENSG00000149488|ENST00000358864|TMC2	26.063383197487333	0.6669871633831898	2				NaN	NaN	0	NaN	3104	2774	5876
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5881	19.472	NaN	6054.1	30	0	825.07	0.106	+			25289	LNTKLTTIA	9	73	487.79786647735386	NaN	0	487.7980651855469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LNTKLTTIA_	NEB|p.P928Lfs*29|1|0.38|ENSG00000183091|chr2:151684830-151684830|G/-|frameshift_variant	56.72105179125745	0.16330365735109603	2				NaN	NaN	0	NaN	3105	2774	5876
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5882	19.474	NaN	46932	30	0	13084	0.034	+			35610	SCCPVGCAK	9	84	462.68937171276207	923.3641904923242	2	462.690185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_SCC(Carbamidomethyl (C))PVGCAK_	CON__P67983;ENSG00000125144|ENST00000379811|MT1G;ENSG00000125148|ENST00000245185|MT2A;ENSG00000169688|ENST00000334346|MT1B;ENSG00000187193|ENST00000394485|MT1X;ENSG00000205364|ENST00000379818|MT1M;ENST00000330439.6_1_16:56660742-56660880:+|nuORF;ENST00000562017.1_1_16:56643131-56643263:+|nuORF;ENST00000563985.1_1_16:56642884-56643263:+|nuORF;ENST00000567300.1_1_16:56642646-56643263:+|nuORF;nc|ENSG00000125144|P13640-2|MT1G;nc|ENSG00000169715|P04732|MT1E	98.62937762414208	0.04060045538121712	2				NaN	NaN	0	NaN	3106	2774	5876
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5883	19.474	NaN	3078.4	30	0	277.55	0.14	+			9579	ELITGRDLQ	9	63	522.7882594869748	1043.5619660407494	2	522.7879638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ELITGRDLQ_	ENST00000554737.2_1_14:73524881-73525067:-|nuORF	71.87747018426188	0.13267044672804276	2				NaN	NaN	0	NaN	3107	2774	5876
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5895	19.501	NaN	13642	30	0	3297.5	0.214	+			42836	TEEERRAEL	9	76	566.7828498259981	1131.5511467187962	2	566.783935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEEERRAEL_	ENSG00000140259|ENST00000267812|MFAP1;ENST00000484386.1_1_15:44097294-44102132:-|nuORF	112.10723106719422	0.02684780151337622	2				NaN	NaN	0	NaN	3116	2777	5894
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5896	19.505	NaN	18027	30	0	10795	0.106				-1	LGNMRSKKP	9	56	349.5302071869413	1045.568792161024	3	349.5307312011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LGNM(Oxidation (M))RSKKP_	HS1BP3|p.I206N|1|0.22|ENSG00000118960|chr2:20638442-20638442|A/T|missense_variant	31.529811441608018	0.5085848003137583	2				NaN	NaN	0	NaN	3117	2777	5894
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5897	19.507	NaN	11062	30	0	2141.7	0.106			+	48034	VSRSDTQKPD	10	60	378.1909801628786	1131.5511110888358	3	378.1913146972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSRSDTQKPD_	REV__ENST00000494921.1_1_20:18568716-18611186:+|nuORF	36.446750945000026	0.5818864909973037	2				NaN	NaN	0	NaN	3118	2777	5894
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5898	19.509	NaN	11640	30	0	2183.6	0.106			+	18604	ISRTVALQ	8	74	444.2689101260214	NaN	0	444.2690124511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ISRTVALQ_	REV__ENSG00000158428|ENST00000289388|CATIP	93.1432384553994	1.7418937515398478	2				NaN	NaN	0	NaN	3119	2777	5894
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5899	19.51	NaN	7092.1	30	0	1147.9	0.106	+			18256	IPDGHTKEM	9	71	514.2470249225776	1026.479496911955	2	514.2477416992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IPDGHTKEM_	ENSG00000136628|ENST00000366923|EPRS1	70.8162118820467	0.13725933411854815	2				NaN	NaN	0	NaN	3120	2777	5894
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5900	19.512	NaN	9584.9	30	0	1915.8	0.106			+	39101	SSSVNQIK	8	66	431.73672900342194	NaN	0	431.7353820800781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSSVNQIK_	REV__ENSG00000185010|ENST00000360256|F8;REV__F8|p.E1101Rfs*17|1|0.25|ENSG00000185010|chrX:154930489-154930490|-/T|frameshift_variant;REV__F8|p.E1292Rfs*16|2|0.53|ENSG00000185010|chrX:154929920-154929920|T/-|frameshift_variant;REV__F8|p.E1988Rfs*4|1|0.36|ENSG00000185010|chrX:154903942-154903943|-/T|frameshift_variant;REV__F8|p.G1291Rfs*29|1|0.48|ENSG00000185010|chrX:154929919-154929920|-/T|frameshift_variant;REV__F8|p.N982Mfs*22|1|0.31|ENSG00000185010|chrX:154930845-154930845|T/-|frameshift_variant	51.33545320467046	1.7418937515398478	2				NaN	NaN	0	NaN	3121	2777	5894
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5901	19.514	NaN	12405	30	0	4458.6	0.034	+			8024	DTPRMPGAL	9	71	479.2441909570691	956.4738289809383	2	479.2448425292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DTPRMPGAL_	ENST00000560219.2_1_15:90321464-90321809:+|nuORF	51.33545320467046	0.2872990594074956	2				NaN	NaN	0	NaN	3122	2777	5894
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5917	19.548	NaN	24490	30	0	9366.4	0.215	+			2974	ASFDKAKLK	9	84	504.29775537836235	1006.5809578235247	2	504.2975158691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASFDKAKLK_	ENSG00000034510|ENST00000233143|TMSB10	114.8945686534367	0.024290463251177924	2				NaN	NaN	0	NaN	3135	2780	5916
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5918	19.551	NaN	15908	30	0	9435.1	0.106	+			42514	TAPQAEHAM	9	69	478.21829356808297	954.422034202966	2	478.2184753417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAPQAEHAM_	CLUH|p.D1252Tfs*5|1|0.42|ENSG00000132361|chr17:2690771-2690771|T/-|frameshift_variant;CLUH|p.K974Rfs*21|1|0.3|ENSG00000132361|chr17:2694178-2694178|G/-|frameshift_variant;CLUH|p.P878Rfs*12|1|0.23|ENSG00000132361|chr17:2694959-2694959|G/-|frameshift_variant;ENSG00000132361|ENST00000651024|CLUH;nc|ENSG00000132361|O75153|CLUH	65.46538089061403	0.16805504838372562	2				NaN	NaN	0	NaN	3136	2780	5916
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5919	19.553	NaN	7055	30	0	1644.4	0.106			+	6822	CHPHTPLNLE	10	69	580.7810558088865	NaN	0	580.7806396484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_CHPHTPLNLE_	REV__ENSG00000121101|ENST00000349033|TEX14;REV__nc|ENSG00000121101|Q8IWB6-2|TEX14;REV__nc|ENSG00000121101|Q8IWB6|TEX14;REV__TEX14|p.A467Sfs*11|3|0.24|ENSG00000121101|chr17:58602546-58602547|-/T|frameshift_variant;REV__TEX14|p.G1117Hfs*15|1|0.12|ENSG00000121101|chr17:58579689-58579692|CACC/-|frameshift_variant	44.116797842482775	0.3427969396372342	2				NaN	NaN	0	NaN	3137	2780	5916
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5920	19.555	NaN	12564	30	0	4121.6	0.106			+	12338	GDKGLQGWP	9	75	479.2441909570691	956.4738289809383	2	479.24432373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GDKGLQGWP_	REV__ENSG00000162073|ENST00000318782|PAQR4	35.61828744233558	0.47037581924408073	2				NaN	NaN	0	NaN	3138	2780	5916
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5921	19.557	NaN	5058.7	30	0	368.48	0.106				-1	VERPGDCF	8	71	490.21968712800543	978.4248213228109	2	490.22027587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_VERPGDC(Carbamidomethyl (C))F_	ENSG00000130589|ENST00000467148|HELZ2;HELZ2|p.G2213Vfs*22|1|0.14|ENSG00000130589|chr20:63561876-63561876|C/-|frameshift_variant;HELZ2|p.R2206Vfs*29|2|0.28|ENSG00000130589|chr20:63561898-63561898|G/-|frameshift_variant;nc|ENSG00000130589|Q9BYK8-2|HELZ2;nc|ENSG00000130589|Q9BYK8|HELZ2	65.80317337860623	0.44433089765398776	2				NaN	NaN	0	NaN	3139	2780	5916
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5922	19.558	NaN	7495.3	30	0	745.55	0.034	+			35808	SEAPPTNQA	9	58	457.7137393463844	913.4129257595688	2	457.7138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SEAPPTNQA_	ENSG00000179222|ENST00000326587|MAGED1;ENST00000485420.5_1_X:51636757-51640983:+|nuORF;ENST00000494718.5_1_X:51637400-51640272:+|nuORF;MAGED1|p.P628Rfs*18|1|0.09|ENSG00000179222|chrX:51900215-51900215|C/-|frameshift_variant;nc|ENSG00000179222|Q9Y5V3-2|MAGED1	115.49404669440601	0.023927554121326553	2				NaN	NaN	0	NaN	3140	2780	5916
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5923	19.559	NaN	3408	30	0	337.15	0.14	+			27044	LYYMKDLP	8	67	529.7656886707864	1057.5168244083727	2	529.7667846679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_LYYM(Oxidation (M))KDLP_	ENSG00000241973|ENST00000255882|PI4KA;ENST00000485963.5_1_22:21152870-21213097:-|nuORF;PI4KA|p.E1291Kfs*2|1|0.43|ENSG00000241973|chr22:20734425-20734425|G/-|frameshift_variant;PI4KA|p.H1295Pfs*13|1|0.28|ENSG00000241973|chr22:20734411-20734412|-/G|frameshift_variant;PI4KA|p.H1295Tfs*36|2|0.31|ENSG00000241973|chr22:20734412-20734412|G/-|frameshift_variant	65.80317337860623	0.44433089765398776	2				NaN	NaN	0	NaN	3141	2780	5916
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5939	19.594	NaN	281620	30	0	36389	0.175	+			34576	RVMKALVNR	9	135	362.88995266670355	1085.6480286003107	3	362.89019775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVMKALVNR_	ENSG00000149136|ENST00000278412|SSRP1;ENST00000293880.9_1_11:57098199-57100416:-|nuORF	120.8684288430529	0.02067403653475984	2				NaN	NaN	0	NaN	3154	2783	5938
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5940	19.597	NaN	85746	30	0	27114	0.106			+	30373	PVLDFKVLVG	10	106	543.8309740743459	1085.6473952154918	2	543.83203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PVLDFKVLVG_	REV__ENSG00000173080|ENST00000368318|RXFP4	65.15724298150197	0.31893571707528906	2				NaN	NaN	0	NaN	3155	2783	5938
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5941	19.599	NaN	131420	30	0	28437	0.106				-1	 	0	100	479.7631846105299	957.5118162878598	2	479.7635498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3156	2783	5938
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5942	19.601	NaN	4344.6	30	0	411.3	0.106	+			35532	SAVKEGTAM	9	66	447.22289065633055	892.4312283794611	2	447.22308349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SAVKEGTAM_	BICC1|p.I566Nfs*44|1|0.3|ENSG00000122870|chr10:58799216-58799217|-/A|frameshift_variant;BICC1|p.I566Sfs*5|1|0.57|ENSG00000122870|chr10:58799217-58799217|A/-|frameshift_variant;BICC1|p.P501Hfs*18|1|0.03|ENSG00000122870|chr10:58798530-58798530|C/-|frameshift_variant;ENSG00000122870|ENST00000373886|BICC1;nc|ENSG00000122870|Q9H694-2|BICC1	65.46538089061403	0.16805504838372562	2				NaN	NaN	0	NaN	3157	2783	5938
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5943	19.602	NaN	3605.2	30	0	781.84	0.106	+			37165	SIVSALKREA	10	49	358.5483009665352	1072.6230734998055	3	358.548583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SIVSALKREA_	C5|p.R1206C|1|0.39|ENSG00000106804|chr9:120980125-120980125|G/A|missense_variant;C5|p.W1228Gfs*21|1|0.25|ENSG00000106804|chr9:120976882-120976882|A/-|frameshift_variant;ENSG00000106804|ENST00000223642|C5	35.15202426646627	0.5927656479315102	2				NaN	NaN	0	NaN	3158	2783	5938
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5944	19.604	NaN	4019.7	30	0	784.27	0.106	+			27310	MGVLMSKRQTV	11	68	431.2353672197049	1290.6842722593149	3	431.2371520996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))MGVLMSKRQTV_	ENSG00000122733|ENST00000242315|PHF24;ENST00000476115.2_1_9:34971295-34972428:+|nuORF	43.650786325866115	0.5079891456189096	2				NaN	NaN	0	NaN	3159	2783	5938
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5945	19.606	NaN	54023	30	0	13616	0.036				-1	 	0	90	549.7637229116431	1097.512892890086	2	549.7645874023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3160	2783	5938
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5963	19.642	NaN	64688	30	0	20728	0.135	+			49164	VVMRDPASK	9	76	501.77313049387476	1001.5317080545495	2	501.77337646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVMRDPASK_	ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1	155.5846463517096	0.005567437401040498	2				NaN	NaN	0	NaN	3175	2786	5962
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5964	19.644	NaN	109340	30	0	26075	0.106				-1	 	0	110	523.8131966546525	1045.611840376105	2	523.8140869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3176	2786	5962
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5965	19.646	NaN	21477	30	0	6047.1	0.106				-1	 	0	73	527.2998294980196	1052.585106062839	2	527.3008422851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3177	2786	5962
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5966	19.648	NaN	32485	30	0	6111	0.106	+			16486	HETSKMKVL	9	82	536.7934874937206	1071.572422054241	2	536.794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HETSKMKVL_	ENSG00000067445|ENST00000173898|TRO;ENSG00000179222|ENST00000326587|MAGED1;ENST00000475183.1_1_X:54953428-54957230:+|nuORF;ENST00000492706.5_1_X:54953428-54957450:+|nuORF;ENST00000494718.5_1_X:51643260-51645023:+|nuORF;nc|ENSG00000067445|Q12816-2|TRO;nc|ENSG00000067445|Q12816-3|TRO;nc|ENSG00000067445|Q12816-4|TRO;nc|ENSG00000067445|Q12816-5|TRO;nc|ENSG00000179222|Q9Y5V3-2|MAGED1;TRO|p.S1034Rfs*10|1|0.07|ENSG00000067445|chrX:54929826-54929826|C/-|frameshift_variant	145.15565482312357	0.00806134135205793	2				NaN	NaN	0	NaN	3178	2786	5962
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5967	19.65	NaN	13273	30	0	1479.4	0.106	+			1064	AEKVATRGL	9	77	472.77953311436005	943.5445132955201	2	472.7795715332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEKVATRGL_	ENSG00000149273|ENST00000531188|RPS3;ENST00000433853.1_1_3:183867695-183868220:+|nuORF;nc|ENSG00000149273|P23396-2|RPS3	56.632244143249146	0.24168844994051353	2				NaN	NaN	0	NaN	3179	2786	5962
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5968	19.651	NaN	24892	30	0	10890	0.106				-1	VVKKGCPAVP	10	56	352.2070910285896	1053.599443685969	3	352.2073974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_VVKKGC(Carbamidomethyl (C))PAVP_	PLEKHM1|p.R1042Afs*24|1|0.3|ENSG00000225190|chr17:45437905-45437905|G/-|frameshift_variant	36.446750945000026	0.5818864909973037	2				NaN	NaN	0	NaN	3180	2786	5962
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5969	19.653	NaN	9159.3	30	0	2886.5	0.034	+			22577	KTSSGFLAK	9	71	469.7685963073668	937.5226396815336	2	469.76861572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KTSSGFLAK_	ENSG00000039319|ENST00000505560|ZFYVE16	83.6470233535746	0.08277643980271215	2				NaN	NaN	0	NaN	3181	2786	5962
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5985	19.687	NaN	13250	30	0	3039.8	0.214	+			5009	ATSAVTVTR	9	71	453.25548721389094	904.4964214945819	2	453.2559509277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSAVTVTR_	ENSG00000123444|ENST00000430070|KBTBD4;nc|ENSG00000123444|Q9NVX7-1|KBTBD4;nc|ENSG00000123444|Q9NVX7-3|KBTBD4	120.8684288430529	0.02067403653475984	2				NaN	NaN	0	NaN	3194	2789	5984
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5986	19.69	NaN	17365	30	0	6095.5	0.106	+			39591	STGRVVGVLL	10	49	334.2096630693854	999.6071598083562	3	334.2098083496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STGRVVGVLL_	ENSG00000240184|ENST00000308177|PCDHGC3;nc|ENSG00000240184|Q9UN70-2|PCDHGC3;PCDHGC3|p.F556Lfs*34|1|0.18|ENSG00000240184|chr5:141477782-141477782|T/-|frameshift_variant;PCDHGC3|p.N689Ifs*10|6|0.29|ENSG00000240184|chr5:141478175-141478175|A/-|frameshift_variant	32.81241826257853	0.6118718159329168	2				NaN	NaN	0	NaN	3195	2789	5984
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5987	19.692	NaN	10698	30	0	2852.1	0.106				-1	 	0	74	392.73136035790446	783.448167782609	2	392.73162841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3196	2789	5984
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5988	19.694	NaN	14520	30	0	1313.1	0.106	+			34957	SAAKSLLNK	9	85	466.2822961961128	NaN	0	466.2818908691406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SAAKSLLNK_	ENST00000474131.5_1_10:75577276-75601951:-|nuORF;ENST00000492020.5_1_10:75597207-75607060:-|nuORF;nc|ENSG00000058404|Q13554-3|CAMK2B;nc|ENSG00000058404|Q13554-4|CAMK2B;nc|ENSG00000058404|Q13554-5|CAMK2B;nc|ENSG00000148660|Q13555-10|CAMK2G;nc|ENSG00000148660|Q13555-2|CAMK2G;nc|ENSG00000148660|Q13555-3|CAMK2G;nc|ENSG00000148660|Q13555-4|CAMK2G;nc|ENSG00000148660|Q13555-7|CAMK2G;nc|ENSG00000148660|Q13555-8|CAMK2G;nc|ENSG00000148660|Q13555-9|CAMK2G;nc|ENSG00000148660|Q13555|CAMK2G	109.43880257439609	0.010203938004363878	2				NaN	NaN	0	NaN	3197	2789	5984
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5989	19.696	NaN	6449.8	30	0	1159	0.106	+			21408	KMRALEEEKGK	11	70	445.57472969613315	NaN	0	445.57476806640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_KM(Oxidation (M))RALEEEKGK_	CCDC73|p.C99R|1|0.1|ENSG00000186714|chr11:32700811-32700811|A/G|missense_variant	47.227680397652996	0.33523056580093125	2				NaN	NaN	0	NaN	3198	2789	5984
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5990	19.697	NaN	3903.7	30	0	629.39	0.106	+			5771	AVGPHLTAK	9	52	447.2632084827959	892.5118640323918	2	447.2634582519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AVGPHLTAK_	ENSG00000185361|ENST00000327473|TNFAIP8L1	42.396135135203025	0.392153681582562	2				NaN	NaN	0	NaN	3199	2789	5984
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5991	19.699	NaN	4089.1	30	0	415.57	0.032			+	37744	SLTRSAAP	8	61	401.7231578531623	801.4317627731247	2	402.2221374511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SLTRSAAP_	REV__ENST00000313056.9_1_17:80348217-80348325:-|nuORF	44.116797842482775	0.6307669463330267	2				NaN	NaN	0	NaN	3200	2789	5984
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6005	19.729	NaN	119360	30	0	38110	0.171	+			48909	VVDNGSGMCK	10	85	505.2250182663495	1008.435483599499	2	505.2257995605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVDNGSGMCK_	ACTBL2|p.R29Gfs*7|1|0.37|ENSG00000169067|chr5:57482623-57482623|G/-|frameshift_variant;ENSG00000075624|ENST00000646664|ACTB;ENSG00000169067|ENST00000423391|ACTBL2;ENST00000418351.1_1_15:44282253-44282364:-|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000477812.1_1_7:5569027-5569288:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF	133.9934435666947	0.012355562819581703	2				NaN	NaN	0	NaN	3211	2792	6004
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6006	19.732	NaN	14565	30	0	1966.2	0.106	+			30689	QCRKQLGL	8	69	501.7805961158004	1001.5466392984008	2	501.78118896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_QC(Carbamidomethyl (C))RKQLGL_	ENSG00000157214|ENST00000394621|STEAP2;nc|ENSG00000157214|Q8NFT2-2|STEAP2;nc|ENSG00000157214|Q8NFT2-3|STEAP2	62.97842346883844	0.4722955155785405	2				NaN	NaN	0	NaN	3212	2792	6004
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6007	19.734	NaN	13706	30	0	2574	0.106	+			854	AEGTAQQRL	9	69	487.25574909395647	972.496945254713	2	487.2560729980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEGTAQQRL_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	124.08010499294276	0.018729767491916592	2				NaN	NaN	0	NaN	3213	2792	6004
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6008	19.736	NaN	4579.3	30	0	584.55	0.106	+			28076	NAESGRGQVM	10	68	524.7450143027731	1047.4754756723462	2	524.7460327148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NAESGRGQVM_	ENSG00000008517|ENST00000525643|IL32;nc|ENSG00000008517|P24001-3|IL32;nc|ENSG00000008517|P24001-4|IL32;nc|ENSG00000008517|P24001|IL32	68.84614121027924	0.2867470276772903	2				NaN	NaN	0	NaN	3214	2792	6004
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6009	19.738	NaN	9554.5	30	0	6361.9	0.106	+			296	AAPGEARAM	9	61	437.215208704529	872.415864475858	2	437.21563720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AAPGEARAM_	ENSG00000165238|ENST00000427277|WNK2;ENST00000467401.1_1_9:96070551-96082671:+|nuORF;nc|ENSG00000165238|Q9Y3S1-2|WNK2;nc|ENSG00000165238|Q9Y3S1-4|WNK2;nc|ENSG00000165238|Q9Y3S1|WNK2	54.776311868738084	0.25715957988447635	2				NaN	NaN	0	NaN	3215	2792	6004
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6010	19.739	NaN	16210	30	0	2578.6	0.106			+	-1	VSFNTPMNVYV	11	82	429.5416157465421	1285.6030178398264	3	429.54168701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_VSFNTPM(Oxidation (M))NVYV_	REV__ENSG00000180730|ENST00000319420|SHISA2	31.634271133179894	0.6579734920221648	2				NaN	NaN	0	NaN	3216	2792	6004
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6011	19.741	NaN	2800.2	30	0	458.09	0.036			+	49398	VVTEPTVYF	9	65	527.7753722477374	1053.5361915622748	2	527.7750244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VVTEPTVYF_	REV__CON__Q9N2I2	45.9519527083369	0.35044536499095585	2				NaN	NaN	0	NaN	3217	2792	6004
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6023	19.767	NaN	10447	30	0	3588.4	0.214	+			6087	AVNIVCHSK	9	58	324.17566743586633	969.5051729077991	3	324.17608642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVNIVCHSK_	ENSG00000159352|ENST00000368884|PSMD4;ENST00000461434.1_1_1:151227258-151234901:+|nuORF;ENST00000462970.5_1_1:151227258-151237442:+|nuORF;nc|ENSG00000159352|P55036-2|PSMD4	61.691277971877994	0.19951612995419254	2				NaN	NaN	0	NaN	3226	2795	6022
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6024	19.771	NaN	7885.6	30	0	2969.3	0.106			+	26281	LSTRGTPA	8	63	401.7231578531623	801.4317627731247	2	401.72442626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSTRGTPA_	REV__ENST00000394785.7_1_4:103997423-103997750:-|nuORF	44.116797842482775	0.6307669463330267	2				NaN	NaN	0	NaN	3227	2795	6022
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6025	19.773	NaN	9109	30	0	1209.8	0.106	+			1091	AELEKHMAA	9	80	500.24939134459345	998.4842297559869	2	500.2501525878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AELEKHMAA_	ENSG00000125844|ENST00000377813|RRBP1;ENST00000468428.1_1_20:17600178-17600424:-|nuORF;nc|ENSG00000125844|Q9P2E9-3|RRBP1	98.62937762414208	0.04060045538121712	2				NaN	NaN	0	NaN	3228	2795	6022
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6026	19.774	NaN	18007	30	0	1280	0.106	+			42977	TEKGKDVEL	9	84	509.77522651249694	NaN	0	509.7743225097656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TEKGKDVEL_	nc|ENSG00000211714|A0A075B6L6|TRBV7-3;nc|ENSG00000282939|A0A1B0GXF2|TRBV7-2	85.86182877749512	0.05129763505578642	2				NaN	NaN	0	NaN	3229	2795	6022
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6027	19.776	NaN	2165.3	30	0	253.49	0.106				-1	WGKNCHYQ	8	63	546.7380356168818	1091.4615183005635	2	546.7387084960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_WGKNC(Carbamidomethyl (C))HYQ_	ENST00000411980.1_1_2:98823421-98823919:+|nuORF	47.91560031466742	0.6071945918984287	2				NaN	NaN	0	NaN	3230	2795	6022
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6028	19.778	NaN	3063.1	30	0	365.76	0.106	+			41020	SVGVSSGKL	9	54	417.23953202512655	832.4645111170531	2	417.23980712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVGVSSGKL_	ENSG00000156709|ENST00000287295|AIFM1;nc|ENSG00000156709|O95831-2|AIFM1;nc|ENSG00000156709|O95831-3|AIFM1;nc|ENSG00000156709|O95831-5|AIFM1	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	3231	2795	6022
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6029	19.78	NaN	2858.9	30	0	159.41	0.04			+	51190	YPLAHFDLFAR	11	58	450.5718393344182	1348.6936886034546	3	450.572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YPLAHFDLFAR_	REV__ENSG00000148334|ENST00000338961|PTGES2;REV__ENST00000277462.9_1_9:130887138-130890631:-|nuORF;REV__ENST00000474124.5_1_9:130886092-130889945:-|nuORF	19.262678746197807	0.7802940895261122	2				NaN	NaN	0	NaN	3232	2795	6022
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6041	19.805	NaN	27663	30	0	5580.5	0.214			+	684	AEAKQVKNK	9	78	508.29766478822205	1014.5807766432441	2	508.2981872558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEAKQVKNK_	REV__nc|ENSG00000170370|Q04743-2|EMX2	71.87747018426188	0.13267044672804276	2				NaN	NaN	0	NaN	3241	2798	6040
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6042	19.808	NaN	27513	30	0	4568.5	0.106	+			44974	TVCKLSVSK	9	88	511.2882128438485	1020.561872754497	2	511.2889099121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_TVC(Carbamidomethyl (C))KLSVSK_	ENSG00000127603|ENST00000564288|MACF1;nc|ENSG00000127603|O94854|MACF1;nc|ENSG00000127603|Q9UPN3-2|MACF1;nc|ENSG00000127603|Q9UPN3-3|MACF1;nc|ENSG00000127603|Q9UPN3-4|MACF1;nc|ENSG00000127603|Q9UPN3-5|MACF1;nc|ENSG00000127603|Q9UPN3|MACF1	60.1669710687717	0.2122228167747824	2				NaN	NaN	0	NaN	3242	2798	6040
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6043	19.81	NaN	23174	30	0	8592.6	0.106	+			5296	ATVKEQIVK	9	57	339.20940153957605	1014.6063752189282	3	339.2096252441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATVKEQIVK_	ENSG00000133103|ENST00000455146|COG6	49.536043120802724	0.308405419312776	2				NaN	NaN	0	NaN	3243	2798	6040
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6044	19.812	NaN	6044.6	30	0	676.25	0.106	+			3358	ASNLHALAH	9	71	467.24792365626917	932.4812943793384	2	467.2481994628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASNLHALAH_	ENSG00000152518|ENST00000282388|ZFP36L2;ZFP36L2|p.E103Gfs*23|2|0.66|ENSG00000152518|chr2:43225498-43225499|-/T|frameshift_variant;ZFP36L2|p.F119Ifs*7|1|0.3|ENSG00000152518|chr2:43225449-43225450|-/T|frameshift_variant;ZFP36L2|p.F162Sfs*314|1|0.37|ENSG00000152518|chr2:43225319-43225320|-/AGGGCCG|frameshift_variant;ZFP36L2|p.G144Afs*43|5|0.19|ENSG00000152518|chr2:43225373-43225373|C/-|frameshift_variant;ZFP36L2|p.G145Rfs*329|1|0.41|ENSG00000152518|chr2:43225372-43225373|-/C|frameshift_variant;ZFP36L2|p.H201Pfs*259|1|0.56|ENSG00000152518|chr2:43225199-43225202|GTAT/-|frameshift_variant;ZFP36L2|p.I215Hfs*259|1|0.31|ENSG00000152518|chr2:43225162-43225163|-/A|frameshift_variant;ZFP36L2|p.K173Vfs*300|1|0.38|ENSG00000152518|chr2:43225286-43225287|TT/-|frameshift_variant;ZFP36L2|p.Q138Afs*336|1|0.38|ENSG00000152518|chr2:43225393-43225394|-/A|frameshift_variant;ZFP36L2|p.S151Yfs*323|1|0.23|ENSG00000152518|chr2:43225352-43225353|-/T|frameshift_variant;ZFP36L2|p.S89Gfs*11|1|0.44|ENSG00000152518|chr2:43225532-43225539|GCCGCGCT/-|frameshift_variant;ZFP36L2|p.Y98Lfs*86|1|0.3|ENSG00000152518|chr2:43225502-43225511|AGGGTGCCGT/-|frameshift_variant;ZFP36L2|p.Y98Rfs*4|1|0.14|ENSG00000152518|chr2:43225512-43225513|AG/-|frameshift_variant	44.377184641726394	0.36891676396732553	2				NaN	NaN	0	NaN	3244	2798	6040
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6045	19.814	NaN	5637	30	0	920.86	0.106				-1	 	0	65	486.78915546358473	971.5637579939695	2	486.7894287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3245	2798	6040
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6046	19.816	NaN	5956.8	30	0	788.84	0.106	+			37782	SLYAGSNN	8	71	413.18933469130366	824.3641164494073	2	413.1902160644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLYAGSNN_	ENSG00000161905|ENST00000293761|ALOX15;ENST00000573740.1_1_17:4542344-4544955:-|nuORF;nc|ENSG00000161905|P16050-2|ALOX15	29.14955571784316	0.7342621283720113	2				NaN	NaN	0	NaN	3246	2798	6040
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6047	19.817	NaN	6180.2	30	0	1124.7	0.033				-1	 	0	61	422.23718680023865	842.4598206672773	2	422.237548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3247	2798	6040
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6060	19.845	NaN	41448	30	0	11938	0.214				-1	 	0	82	453.7474077510762	905.4802625689524	2	453.7477111816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3257	2801	6059
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6061	19.849	NaN	42087	30	0	11507	0.106	+			39521	STFRESFKK	9	90	377.2047687799057	NaN	0	377.20477294921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STFRESFKK_	ENSG00000067066|ENST00000340126|SP100;nc|ENSG00000067066|P23497-2|SP100;nc|ENSG00000067066|P23497-3|SP100;nc|ENSG00000067066|P23497-5|SP100;nc|ENSG00000067066|P23497-6|SP100;nc|ENSG00000067066|P23497-7|SP100;nc|ENSG00000067066|P23497|SP100	61.691277971877994	0.14210560126578747	2				NaN	NaN	0	NaN	3258	2801	6059
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6062	19.851	NaN	7369.3	30	0	2024.5	0.106			+	31173	QGLKKYVKG	9	70	510.81309262881473	1019.6116323244295	2	510.8135070800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QGLKKYVKG_	REV__ENSG00000004897|ENST00000066544|CDC27;REV__ENST00000533415.5_1_17:45198303-45266605:-|nuORF;REV__nc|ENSG00000004897|P30260-2|CDC27	35.15202426646627	0.4747332964206883	2				NaN	NaN	0	NaN	3259	2801	6059
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6063	19.852	NaN	10127	30	0	1041.3	0.106			+	22871	KVLDKLSQ	8	77	465.7840296096591	NaN	0	465.78411865234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KVLDKLSQ_	REV__ENSG00000099783|ENST00000325495|HNRNPM;REV__HNRNPM|p.M346Wfs*22|1|0.25|ENSG00000099783|chr19:8473699-8473699|A/-|frameshift_variant;REV__nc|ENSG00000099783|P52272-2|HNRNPM	65.46538089061403	1.7418937515398478	2				NaN	NaN	0	NaN	3260	2801	6059
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6064	19.854	NaN	3510.9	30	0	1255	0.106				-1	TAALGDIMGH	10	43	334.49502929621184	1000.4632584888355	3	334.4953918457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_TAALGDIM(Oxidation (M))GH_	COL5A2|p.L1390Ffs*17|1|0.31|ENSG00000204262|chr2:189035099-189035100|-/A|frameshift_variant;COL5A2|p.T1388Nfs*21|1|0.03|ENSG00000204262|chr2:189035106-189035107|-/CTGTGGT|frameshift_variant;ENSG00000204262|ENST00000374866|COL5A2	29.170058357718403	0.6416167986984785	2				NaN	NaN	0	NaN	3261	2801	6059
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6065	19.856	NaN	8218.4	30	0	1434.7	0.035	+			18369	IQSGEQPYK	9	68	525.2659606724516	1048.517368411703	2	525.2666625976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IQSGEQPYK_	ENSG00000168653|ENST00000372969|NDUFS5	58.22992032128504	0.22837015374068087	2				NaN	NaN	0	NaN	3262	2801	6059
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6066	19.857	NaN	32648	30	0	12550	0.145				-1	ASRTVHAIMML	11	74	415.88671737211075	1244.6383227165322	3	415.8870544433594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_ASRTVHAIM(Oxidation (M))ML_	ENST00000375592.7_1_1:16621313-16632330:-|nuORF	32.75053402867276	0.6462648045997152	2				NaN	NaN	0	NaN	3263	2801	6059
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6084	19.896	NaN	33512	30	0	13423	0.214				-1	 	0	68	472.755561701558	943.496570469916	2	472.7556457519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3278	2804	6083
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6085	19.9	NaN	19555	30	0	3330.4	0.106	+			43874	TMKCKEGDK	9	77	520.2482162285378	1038.4818795238755	2	520.249267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TMKCKEGDK_	ENSG00000163568|ENST00000368130|AIM2	93.1432384553994	0.056003526918089595	2				NaN	NaN	0	NaN	3279	2804	6083
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6086	19.902	NaN	16900	30	0	3959.3	0.106	+			2975	ASFDKAKLK	9	75	504.29775537836235	1006.5809578235247	2	504.29766845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASFDKAKLK_	ENSG00000034510|ENST00000233143|TMSB10	146.78539889680295	0.007618400906539062	2				NaN	NaN	0	NaN	3280	2804	6083
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6087	19.904	NaN	9026.7	30	0	816.23	0.106			+	29020	NSRLTSLK	8	79	459.7713964725748	917.5282400119496	2	459.77178955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NSRLTSLK_	REV__ENSG00000134256|ENST00000682167|CD101;REV__ENST00000467588.1_1_1:117575773-117576720:+|nuORF	71.87747018426188	0.391254423828572	2				NaN	NaN	0	NaN	3281	2804	6083
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6088	19.905	NaN	44275	30	0	10768	0.106	+			12646	GEIKIHKM	8	79	478.27277134024126	954.5309897472825	2	478.2731018066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GEIKIHKM_	ENSG00000050405|ENST00000341247|LIMA1;ENST00000552045.1_1_12:50589526-50594661:-|nuORF;LIMA1|p.T536Lfs*38|2|0.4|ENSG00000050405|chr12:50177739-50177739|G/-|frameshift_variant;nc|ENSG00000050405|Q9UHB6-2|LIMA1;nc|ENSG00000050405|Q9UHB6-4|LIMA1;nc|ENSG00000050405|Q9UHB6-5|LIMA1	84.9155231211612	0.2928622555056503	2				NaN	NaN	0	NaN	3282	2804	6083
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6089	19.907	NaN	40458	30	0	12866	0.036	+			16806	HPDKKIVAY	9	85	535.8024595091542	1069.5903660851084	2	535.8035888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HPDKKIVAY_	ATXN10|p.F455Lfs*10|1|0.3|ENSG00000130638|chr22:45843115-45843115|T/-|frameshift_variant;ENSG00000130638|ENST00000252934|ATXN10;nc|ENSG00000130638|Q9UBB4-2|ATXN10	129.42129120953632	0.01549634589885217	2				NaN	NaN	0	NaN	3283	2804	6083
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6090	19.908	NaN	65936	30	0	32319	0.144			+	49987	WALSPHSLY	9	97	358.51835138710385	NaN	0	358.51837158203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_WALSPHSLY_	REV__ENST00000375906.5_1_6:31632217-31632316:-|nuORF	34.172542307311794	0.30503706118289736	2				NaN	NaN	0	NaN	3284	2804	6083
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6108	19.948	NaN	64984	30	0	9822.2	0.215				-1	 	0	97	357.53768722474075	1069.5912322744223	3	357.5379333496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3299	2807	6107
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6109	19.951	NaN	26937	30	0	9221.4	0.106	+			34685	RVSVVAEPK	9	79	492.79493245720863	983.5753119812173	2	492.7952575683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RVSVVAEPK_	ENST00000216799.8_1_14:24610479-24610756:-|nuORF;ENST00000560403.5_1_14:24610645-24610756:-|nuORF	109.43880257439609	0.029570636687953285	2				NaN	NaN	0	NaN	3300	2807	6107
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6110	19.953	NaN	15524	30	0	1940.2	0.106	+			22457	KTLHSQVK	8	78	470.78206010224176	939.5495672712835	2	470.7821044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KTLHSQVK_	ENSG00000143867|ENST00000272223|OSR1	71.87747018426188	0.391254423828572	2				NaN	NaN	0	NaN	3301	2807	6107
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6111	19.955	NaN	45291	30	0	10500	0.106				-1	 	0	85	379.8957401471081	1136.6653910415243	3	379.89605712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3302	2807	6107
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6112	19.957	NaN	6843.6	30	0	1905.2	0.106	+			4320	ATGKVMVMK	9	74	482.7687372473653	963.5229215615307	2	482.76934814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATGKVMVMK_	ENSG00000182541|ENST00000331728|LIMK2;LIMK2|p.G411Afs*3|1|0.4|ENSG00000182541|chr22:31267874-31267874|G/-|frameshift_variant;LIMK2|p.K351T|1|0.32|ENSG00000182541|chr22:31266994-31266994|A/C|missense_variant;nc|ENSG00000182541|P53671-2|LIMK2;nc|ENSG00000182541|P53671-3|LIMK2	63.53385203322761	0.18415635464017938	2				NaN	NaN	0	NaN	3303	2807	6107
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6113	19.959	NaN	13300	30	0	4046.1	0.038			+	12658	GEIQVQRTYL	10	68	402.8870476935624	1205.6393136808872	3	402.8873291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GEIQVQRTYL_	REV__ENSG00000128045|ENST00000248706|RASL11B	34.172542307311794	0.6007644933930345	2				NaN	NaN	0	NaN	3304	2807	6107
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6114	19.959	NaN	3185.4	30	0	569.81	0.138			+	35500	SATSTAPRP	9	56	444.23121835616826	886.4478837791365	2	444.2236633300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SATSTAPRP_	REV__ENST00000448973.6_1_16:685083-685236:-|nuORF	53.351449002276354	0.2690372970092375	2				NaN	NaN	0	NaN	3305	2807	6107
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6132	19.999	NaN	20861	30	0	2949.7	0.214	+			42917	TEIEKARAV	9	81	508.7900539281227	1015.5655549230454	2	508.79058837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEIEKARAV_	ENSG00000148843|ENST00000369797|PDCD11	155.5846463517096	0.005567437401040498	2				NaN	NaN	0	NaN	3320	2810	6131
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6133	20.002	NaN	23821	30	0	4326.1	0.106	+			19772	KEAETRAEF	9	83	540.769229890785	1079.52390684837	2	540.7702026367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEAETRAEF_	CON__Q3SX28;ENSG00000140416|ENST00000403994|TPM1;ENSG00000143549|ENST00000651641|TPM3;ENSG00000167460|ENST00000643579|TPM4;ENSG00000198467|ENST00000645482|TPM2;ENST00000368528.3_1_3:27674554-27675208:+|nuORF;ENST00000397772.2_1_20:32500135-32500381:-|nuORF;ENST00000469717.5_1_1:154130117-154143232:-|nuORF;ENST00000520239.1_1_8:70042334-70042577:+|nuORF;ENST00000558264.5_1_15:63353458-63363368:+|nuORF;ENST00000559108.1_1_15:63354467-63358183:+|nuORF;nc|ENSG00000140416|P09493-10|TPM1;nc|ENSG00000140416|P09493-2|TPM1;nc|ENSG00000140416|P09493-3|TPM1;nc|ENSG00000140416|P09493-4|TPM1;nc|ENSG00000140416|P09493-5|TPM1;nc|ENSG00000140416|P09493-6|TPM1;nc|ENSG00000140416|P09493-7|TPM1;nc|ENSG00000140416|P09493-8|TPM1;nc|ENSG00000140416|P09493-9|TPM1;nc|ENSG00000143549|P06753-2|TPM3;nc|ENSG00000143549|P06753-3|TPM3;nc|ENSG00000143549|P06753-4|TPM3;nc|ENSG00000143549|P06753-5|TPM3;nc|ENSG00000143549|P06753-6|TPM3;nc|ENSG00000143549|P06753-7|TPM3;nc|ENSG00000167460|P67936-2|TPM4;nc|ENSG00000198467|P07951-2|TPM2;nc|ENSG00000198467|P07951-3|TPM2;TPM3|p.A243T|1|0.29|ENSG00000143549|chr1:154170448-154170448|C/T|missense_variant	218.73020215598876	1.841076400425484E-08	2				NaN	NaN	0	NaN	3321	2810	6131
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6134	20.004	NaN	7917	30	0	2348.3	0.106	+			15054	GTNSVICSK	9	60	454.7284148306837	907.4422767281674	2	454.7288513183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTNSVICSK_	ENSG00000102738|ENST00000323563|MRPS31	125.71293069911285	0.017741295328254008	2				NaN	NaN	0	NaN	3322	2810	6131
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6135	20.006	NaN	8316.9	30	0	1389	0.106			+	-1	GLRCRCQY	8	68	528.247898579618	1054.4812442260359	2	528.2493286132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_GLRCRC(Carbamidomethyl (C))QY_	REV__ADGRE5|p.P190L|1|0.51|ENSG00000123146|chr19:14397167-14397167|C/T|missense_variant	35.200714571348534	0.6875396545722289	2				NaN	NaN	0	NaN	3323	2810	6131
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6136	20.008	NaN	6765.9	30	0	716.84	0.106	+			44358	TSIQPGAPK	9	72	449.7528641508103	897.4911753684206	2	449.75311279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TSIQPGAPK_	ENSG00000130669|ENST00000360442|PAK4;nc|ENSG00000130669|O96013-2|PAK4;nc|ENSG00000130669|O96013-3|PAK4;nc|ENSG00000130669|O96013-4|PAK4;PAK4|p.Q189Sfs*180|4|0.41|ENSG00000130669|chr19:39173273-39173273|C/-|frameshift_variant	58.22992032128504	0.22837015374068087	2				NaN	NaN	0	NaN	3324	2810	6131
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6137	20.01	NaN	2444.8	30	0	923.63	0.039				-1	LLQFRGSMLAL	11	45	422.24170774438926	1263.7032938333678	3	422.2420349121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_LLQFRGSM(Oxidation (M))LAL_	ENSG00000118816|ENST00000237654|CCNI;nc|ENSG00000118816|Q14094-2|CCNI	14.693671053092006	0.8016877026820449	2				NaN	NaN	0	NaN	3325	2810	6131
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6138	20.01	NaN	11008	30	0	2123.8	0.138			+	126	AAGAAMAAGLA	11	69	437.72562373924563	873.4366945452913	2	437.72613525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AAGAAMAAGLA_	REV__ENSG00000196475|ENST00000358842|GK2;REV__ENSG00000198814|ENST00000427190|GK;REV__ENSG00000229894|ENST00000505354|GK3;REV__GK2|p.F535Lfs*2|1|0.08|ENSG00000196475|chr4:79406596-79406596|A/-|frameshift_variant;REV__nc|ENSG00000198814|P32189-1|GK;REV__nc|ENSG00000198814|P32189-2|GK;REV__nc|ENSG00000198814|P32189-4|GK	71.37791200682192	0.22425249707831713	2				NaN	NaN	0	NaN	3326	2810	6131
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6153	20.044	NaN	41962	30	0	12083	0.214	+			44648	TTGAVLGQK	9	85	437.7529673267701	873.4913817203402	2	437.7531433105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTGAVLGQK_	chr3:58640177-58645509|101|32.06|0.87|5.2|-|2|FAM3D,FAM3D|2;ENSG00000198643|ENST00000358781|FAM3D;FAM3D|p.G139Vfs*16|1|0.28|ENSG00000198643|chr3:58637183-58637183|C/-|frameshift_variant	115.49404669440601	0.023927554121326553	2				NaN	NaN	0	NaN	3338	2813	6152
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6154	20.047	NaN	21705	30	0	5907.4	0.106				-1	 	0	94	445.2537282847678	1332.7393554545035	3	445.2539978027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3339	2813	6152
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6155	20.049	NaN	38499	30	0	3867.5	0.106	+			12391	GEAAKSVKL	9	89	451.76862487173264	901.5226968102653	2	451.7687683105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEAAKSVKL_	ENSG00000189334|ENST00000344616|S100A14	128.60217544463768	0.015992218256422188	2				NaN	NaN	0	NaN	3340	2813	6152
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6156	20.051	NaN	4987.2	30	0	1339.8	0.106	+			4337	ATGNTVVMK	9	70	460.74664132461123	919.4787297160225	2	460.7470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATGNTVVMK_	ALDH1B1|p.L216Sfs*20|1|0.21|ENSG00000137124|chr9:38396389-38396389|C/-|frameshift_variant;ALDH1B1|p.V362Gfs*6|1|0.35|ENSG00000137124|chr9:38396832-38396833|GT/-|frameshift_variant;ENSG00000137124|ENST00000377698|ALDH1B1	37.81151784470057	0.4459294069877048	2				NaN	NaN	0	NaN	3341	2813	6152
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6157	20.053	NaN	3337.9	30	0	513.68	0.106			+	49345	VVSLATNLK	9	63	472.7915498843023	943.5685468354046	2	472.7921447753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVSLATNLK_	REV__KDM3B|p.K627Nfs*60|1|0.38|ENSG00000120733|chr5:138391505-138391505|C/-|frameshift_variant	37.81151784470057	0.4459294069877048	2				NaN	NaN	0	NaN	3342	2813	6152
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6158	20.055	NaN	24719	30	0	11616	0.037	+			32881	RDILQKTVK	9	74	367.56401857210847	1099.6702263165255	3	367.5640563964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RDILQKTVK_	ENST00000477247.6_1_3:75480038-75484201:-|nuORF;ENST00000506770.5_1_4:3949295-3954861:-|nuORF;ENST00000513466.5_1_3:129823014-129828039:-|nuORF;nc|ENSG00000158483|Q9NVL1-3|FAM86C1P	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	3343	2813	6152
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6159	20.055	NaN	7445.2	30	0	759.36	0.139	+			3352	ASNFKSPVK	9	69	489.273902011652	976.533251090104	2	489.2741394042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASNFKSPVK_	ENSG00000204435|ENST00000375882|CSNK2B	136.98908636845044	0.011892605960677736	2				NaN	NaN	0	NaN	3344	2813	6152
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6174	20.089	NaN	215500	30	0	153230	0.214				-1	 	0	87	365.892333732033	1094.655171796299	3	365.8926696777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3356	2816	6173
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6175	20.092	NaN	28176	30	0	13424	0.106				-1	 	0	77	399.21088299840966	796.4072130636193	2	399.21136474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3357	2816	6173
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6176	20.094	NaN	5532.1	30	0	2334.1	0.106			+	2127	ALIKERKIS	9	43	353.22892502070346	1056.6649456623104	3	353.2291564941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ALIKERKIS_	REV__ENSG00000170264|ENST00000404929|FAM161A;REV__FAM161A|p.L549Ifs*9|1|0.22|ENSG00000170264|chr2:61836048-61836049|-/T|frameshift_variant;REV__nc|ENSG00000170264|Q3B820-2|FAM161A;REV__nc|ENSG00000170264|Q3B820|FAM161A	31.529811441608018	0.5085848003137583	2				NaN	NaN	0	NaN	3358	2816	6173
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6177	20.096	NaN	25642	30	0	8184.2	0.106			+	21321	KLTLRLHSQ	9	86	548.3350841637954	1094.6556153943907	2	548.3360595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KLTLRLHSQ_	REV__ENSG00000131864|ENST00000254181|USP29;REV__USP29|p.V357Sfs*21|1|0.27|ENSG00000131864|chr19:57129738-57129738|A/-|frameshift_variant	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	3359	2816	6173
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6178	20.098	NaN	10536	30	0	1998.6	0.106	+			39081	SSSSSSPFK	9	67	457.21587409020583	912.4171952472117	2	457.2167663574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSSSSSPFK_	ENSG00000105722|ENST00000222329|ERF;ERF|p.L525Sfs*6|3|0.27|ENSG00000105722|chr19:42248543-42248543|C/-|frameshift_variant;nc|ENSG00000105722|P50548-2|ERF	85.16082228582465	0.07850854922700509	2				NaN	NaN	0	NaN	3360	2816	6173
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6179	20.1	NaN	6673	30	0	1607.3	0.033				-1	 	0	56	441.7372271211577	881.4599013091154	2	441.73760986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3361	2816	6173
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6180	20.1	NaN	2473	30	0	744.04	0.142				-1	VSCPVGIKK	9	41	329.8597642951548	986.5574634856644	3	329.86004638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_VSC(Carbamidomethyl (C))PVGIKK_	ENSG00000175806|ENST00000317173|MSRA;nc|ENSG00000175806|Q9UJ68-2|MSRA;nc|ENSG00000175806|Q9UJ68-3|MSRA;nc|ENSG00000175806|Q9UJ68-4|MSRA;nc|ENSG00000175806|Q9UJ68-5|MSRA	31.529811441608018	0.5085848003137583	2				NaN	NaN	0	NaN	3362	2816	6173
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6196	20.135	NaN	38442	30	0	16906	0.214				-1	 	0	67	392.23943472060853	782.4643165080171	2	392.2397766113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3375	2819	6195
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6197	20.139	NaN	54004	30	0	27367	0.106	+			22193	KSTELLIRK	9	78	363.23233138065467	1086.675164742164	3	363.2325439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KSTELLIRK_	ENSG00000132475|ENST00000254810|H3-3B;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000168148|ENST00000366696|H3-4;ENSG00000183598|ENST00000331491|H3C13;ENSG00000188375|ENST00000340398|H3-5;ENSG00000197153|ENST00000359303|H3C12;ENSG00000197409|ENST00000356476|H3C4;ENSG00000203811|ENST00000369158|H3C14;ENSG00000203852|ENST00000403683|H3C15;ENSG00000273983|ENST00000614378|H3C8;ENSG00000274750|ENST00000614911|H3C6;ENSG00000275379|ENST00000616365|H3C11;ENSG00000275714|ENST00000613854|H3C1;ENSG00000277775|ENST00000618052|H3C7;ENSG00000278828|ENST00000685041|H3C10;ENST00000401004.2_1:120904811-120905087:+|nuORF;ENST00000586518.1_1_17:73774674-73775034:-|nuORF;nc|ENSG00000273213|Q5TEC6|H3-7	85.16082228582465	0.07850854922700509	2				NaN	NaN	0	NaN	3376	2819	6195
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6198	20.141	NaN	15361	30	0	2424	0.106	+			15936	HAFESSQKY	9	79	548.7561092527351	1095.49766557227	2	548.7570190429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HAFESSQKY_	ENSG00000100027|ENST00000339468|YPEL1;ENSG00000175155|ENST00000312655|YPEL2;ENST00000477675.1_1_22:22055420-22058252:-|nuORF;YPEL1|p.E102A|1|0.07|ENSG00000100027|chr22:21701184-21701184|T/G|missense_variant	124.08010499294276	0.018729767491916592	2				NaN	NaN	0	NaN	3377	2819	6195
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6199	20.143	NaN	6119.3	30	0	621.05	0.106	+			33735	RPMILIEL	8	73	500.7980636069032	999.5815742806064	2	500.7984924316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_RPM(Oxidation (M))ILIEL_	ENSG00000124615|ENST00000340692|MOCS1;nc|ENSG00000124615|Q9NZB8-8|MOCS1	79.9392285194092	0.32408006123154964	2				NaN	NaN	0	NaN	3378	2819	6195
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6200	20.145	NaN	20443	30	0	3530.3	0.106	+			22194	KSTELLIRK	9	77	544.3447872242328	1086.6750215152656	2	544.3458862304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KSTELLIRK_	ENSG00000132475|ENST00000254810|H3-3B;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000168148|ENST00000366696|H3-4;ENSG00000183598|ENST00000331491|H3C13;ENSG00000188375|ENST00000340398|H3-5;ENSG00000197153|ENST00000359303|H3C12;ENSG00000197409|ENST00000356476|H3C4;ENSG00000203811|ENST00000369158|H3C14;ENSG00000203852|ENST00000403683|H3C15;ENSG00000273983|ENST00000614378|H3C8;ENSG00000274750|ENST00000614911|H3C6;ENSG00000275379|ENST00000616365|H3C11;ENSG00000275714|ENST00000613854|H3C1;ENSG00000277775|ENST00000618052|H3C7;ENSG00000278828|ENST00000685041|H3C10;ENST00000401004.2_1:120904811-120905087:+|nuORF;ENST00000586518.1_1_17:73774674-73775034:-|nuORF;nc|ENSG00000273213|Q5TEC6|H3-7	120.8684288430529	0.02067403653475984	2				NaN	NaN	0	NaN	3379	2819	6195
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6201	20.146	NaN	5111.7	30	0	1647	0.106	+			35646	SCNQLDTGV	9	68	468.70777305167735	935.4009931701547	2	468.70794677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SCNQLDTGV_	ENSG00000160505|ENST00000301295|NLRP4;nc|ENSG00000160505|Q96MN2-3|NLRP4	34.172542307311794	0.4838870758800184	2				NaN	NaN	0	NaN	3380	2819	6195
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6202	20.148	NaN	1477.3	30	0	440.07	0.035	+			27274	MFLRMRGV	8	32	337.1854461449051	1008.5345090349153	3	337.18560791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MFLRMRGV_	ENST00000367889.7_1_1:165600262-165600346:+|nuORF	29.841539824830324	0.7289191502596711	2				NaN	NaN	0	NaN	3381	2819	6195
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6214	20.174	NaN	32655	30	0	4208	0.214	+			35824	SEDAEKKVL	9	82	509.7740636819633	1017.5335744307266	2	509.7741394042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEDAEKKVL_	ENSG00000060138|ENST00000228251|YBX3;ENST00000566722.1_1_16:31580383-31580761:-|nuORF;nc|ENSG00000060138|P16989-2|YBX3;nc|ENSG00000060138|P16989-3|YBX3	145.15565482312357	0.00806134135205793	2				NaN	NaN	0	NaN	3390	2822	6213
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6215	20.178	NaN	92830	30	0	15531	0.106	+			39831	STLKSIMKK	9	121	345.8787526994311	1034.6144286984934	3	345.879150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STLKSIMKK_	ENSG00000107104|ENST00000382297|KANK1;ENST00000354485.5_1_9:730997-731267:+|nuORF;ENST00000489369.5_1_9:676972-732786:+|nuORF;nc|ENSG00000107104|Q14678-2|KANK1	114.8945686534367	0.024290463251177924	2				NaN	NaN	0	NaN	3391	2822	6213
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6216	20.18	NaN	4594.4	30	0	951.98	0.106			+	21378	KMISEYFK	8	62	523.2748817868811	1044.5352106405621	2	523.2756958007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KMISEYFK_	REV__DOCK2|p.M1388Gfs*7|1|0.05|ENSG00000134516|chr5:170050344-170050345|-/AGGATGCTCATTAGAGATTT|frameshift_variant;REV__ENSG00000134516|ENST00000520908|DOCK2;REV__ENST00000523351.5_1_5:169188379-169509859:+|nuORF	63.30626980617807	0.4690498839812213	2				NaN	NaN	0	NaN	3392	2822	6213
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6217	20.181	NaN	8989.4	30	0	3735	0.106			+	-1	QPCTEDAAEL	10	64	567.2431537697852	1132.4717546063703	2	567.2443237304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_QPC(Carbamidomethyl (C))TEDAAEL_	REV__SLC19A1|p.P556L|1|0.11|ENSG00000173638|chr21:45515767-45515767|G/A|missense_variant	64.20726635412375	0.3275756395432415	2				NaN	NaN	0	NaN	3393	2822	6213
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6218	20.183	NaN	5128.8	30	0	2531.1	0.106			+	2398	ANVPIVNH	8	51	432.2399416990394	862.4653304648788	2	432.2402038574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ANVPIVNH_	REV__ENST00000390667.9_1_13:73309108-73317683:+|nuORF;REV__ENST00000464754.1_1_13:73302073-73317683:+|nuORF	26.79610172149135	0.7524337208463756	2				NaN	NaN	0	NaN	3394	2822	6213
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6219	20.185	NaN	3491.1	30	0	268.32	0.106	+			33252	RGEAAAAAV	9	52	408.2220351135459	NaN	0	408.22210693359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RGEAAAAAV_	ENST00000373036.4_1_1:38323346-38325272:-|nuORF	29.14955571784316	0.3303970763161698	2				NaN	NaN	0	NaN	3395	2822	6213
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6220	20.187	NaN	9830.9	30	0	1586.1	0.036	+			27053	MADENKNEY	9	80	557.2287802621031	1112.443007591006	2	557.2296752929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MADENKNEY_	ENSG00000137942|ENST00000271234|FNBP1L;FNBP1L|p.T313Pfs*3|1|0.22|ENSG00000137942|chr1:93534852-93534852|A/-|frameshift_variant;nc|ENSG00000137942|Q5T0N5-2|FNBP1L;nc|ENSG00000137942|Q5T0N5-3|FNBP1L;nc|ENSG00000137942|Q5T0N5-4|FNBP1L;nc|ENSG00000137942|Q5T0N5-5|FNBP1L	82.7504851949679	0.08565546331141553	2				NaN	NaN	0	NaN	3396	2822	6213
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6236	20.22	NaN	171410	30	0	52726	0.097				-1	 	0	92	502.76111284514894	1003.5076727570979	2	502.7614440917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3409	2825	6235
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6237	20.222	NaN	102270	30	0	29353	0.065	+			42295	TAELESLEL	9	110	335.5099304722211	1003.5079620168633	3	335.5101623535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAELESLEL_	ENSG00000221829|ENST00000378643|FANCG	71.29570347882199	0.13518600952103718	2				NaN	NaN	0	NaN	3410	2825	6235
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6238	20.223	NaN	87011	30	0	11995	0.074				-1	 	0	85	610.2733934031542	1827.7983508096622	3	610.2734985351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3411	2825	6235
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6239	20.225	NaN	159480	30	0	51863	0.106	+			1244	AERPGEAAV	9	83	450.23223371827794	898.4499145033559	2	450.2326354980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AERPGEAAV_	ENSG00000277443|ENST00000612661|MARCKS	54.722347961057174	0.257609425301511	2				NaN	NaN	0	NaN	3412	2825	6235
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6240	20.226	NaN	18364	30	0	12664	0.106	+			5587	AVATKFVNK	9	48	326.53061595890296	976.5700184769089	3	326.5307922363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVATKFVNK_	ENSG00000038382|ENST00000344204|TRIO;ENST00000508717.1_1_5:14498631-14508016:+|nuORF;nc|ENSG00000038382|O75962-2|TRIO;nc|ENSG00000038382|O75962-3|TRIO;nc|ENSG00000038382|O75962-4|TRIO	42.396135135203025	0.392153681582562	2				NaN	NaN	0	NaN	3413	2825	6235
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6241	20.228	NaN	3552.5	30	0	332.1	0.106			+	43577	TIFDKALNQ	9	62	350.5241947179596	1048.5507547540788	3	350.5245666503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TIFDKALNQ_	REV__tr|U7T0G1|U7T0G1_FUSNUS1motifdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00806PE=4SV=1	37.81151784470057	0.4459294069877048	2				NaN	NaN	0	NaN	3414	2825	6235
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6242	20.23	NaN	9664.8	30	0	1235.1	0.106			+	1645	AGPLAPKGP	9	75	404.2396054298032	806.4646579264064	2	404.23974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AGPLAPKGP_	REV__ENSG00000141858|ENST00000533683|SAMD1;REV__nc|ENSG00000141858|Q6SPF0|SAMD1	60.29395666154354	0.21116425950210296	2				NaN	NaN	0	NaN	3415	2825	6235
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6243	20.232	NaN	4172.1	30	0	661.7	0.037	+			24529	LGLFLGQDEK	10	57	373.8730369848634	1118.5972815547902	3	374.2328796386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_LGLFLGQDEK_	ENST00000537708.1_1_12:6669555-6669804:-|nuORF	30.317721548370564	0.6322445173429027	2				NaN	NaN	0	NaN	3416	2825	6235
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6261	20.269	NaN	88809	30	0	18359	0.214	+			23941	LDQMPPEE	8	103	487.7103762047387	973.4061994762774	2	487.7110290527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LDQM(Oxidation (M))PPEE_	nc|ENSG00000114026|O15527-7|OGG1	60.97194046774394	0.49215940876911696	2				NaN	NaN	0	NaN	3431	2828	6260
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6262	20.272	NaN	5564.3	30	0	1251.6	0.106	+			46821	VIDNGSGMCK	10	69	540.7435100307123	1079.4724671282245	2	540.7445678710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_VIDNGSGMC(Carbamidomethyl (C))K_	ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196604|ENST00000409914|POTEF;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000204434|Q9BYX7|POTEKP;POTEE|p.N792Kfs*34|1|0.2|ENSG00000188219|chr2:131263828-131263829|-/A|frameshift_variant;POTEF|p.R728Gfs*16|3|0.06|ENSG00000196604|chr2:130075290-130075290|G/-|frameshift_variant	109.43880257439609	0.049666173740610824	2				NaN	NaN	0	NaN	3432	2828	6260
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6263	20.274	NaN	45589	30	0	18400	0.106	+			3940	ATATELTTK	9	82	468.2553234715569	934.4960940099138	2	468.25567626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATATELTTK_	ENSG00000133606|ENST00000255977|MKRN1;ENST00000475010.5_1_7:140155450-140179030:-|nuORF;nc|ENSG00000133606|Q9UHC7-2|MKRN1;nc|ENSG00000133606|Q9UHC7-3|MKRN1;nc|ENSG00000133606|Q9UHC7-4|MKRN1;nc|ENSG00000238222|Q13434|MKRN4P	172.24860141594272	0.002383092361811508	2				NaN	NaN	0	NaN	3433	2828	6260
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6264	20.276	NaN	7147	30	0	1450.1	0.106	+			28297	NEDGSRTAL	9	71	481.7301379616904	961.4457229901808	2	481.7303771972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NEDGSRTAL_	ENSG00000068654|ENST00000263857|POLR1A	101.45984612302182	0.0377122763612125	2				NaN	NaN	0	NaN	3434	2828	6260
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6265	20.278	NaN	16141	30	0	1553	0.106			+	34381	RTRRLLSERE	10	80	439.2566533208758	1314.7481305628273	3	439.2572937011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RTRRLLSERE_	REV__ENSG00000130385|ENST00000252677|BMP15	43.650786325866115	0.5155049133366767	2				NaN	NaN	0	NaN	3435	2828	6260
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6266	20.279	NaN	2567.4	30	0	291.74	0.035				-1	 	0	57	494.2820104929131	493.2747340263131	1	494.28253173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3436	2828	6260
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6267	20.28	NaN	5871.3	30	0	967.57	0.139	+			48358	VTGPSQISK	9	69	458.75806343205323	915.5015739309065	2	458.75836181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VTGPSQISK_	ENSG00000127603|ENST00000564288|MACF1;MACF1|p.A5223Lfs*8|1|0.21|ENSG00000127603|chr1:39388486-39388486|G/-|frameshift_variant;MACF1|p.N4824Kfs*19|1|0.33|ENSG00000127603|chr1:39387292-39387293|-/A|frameshift_variant;MACF1|p.T4896Lfs*29|1|0.27|ENSG00000127603|chr1:39387507-39387507|A/-|frameshift_variant;nc|ENSG00000127603|Q9UPN3-5|MACF1;nc|ENSG00000127603|Q9UPN3|MACF1	60.11826168202944	0.21262886028301267	2				NaN	NaN	0	NaN	3437	2828	6260
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6283	20.315	NaN	33669	30	0	9433.5	0.214				-1	 	0	79	437.2369344099941	872.4593158867882	2	437.2372741699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3450	2831	6282
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6284	20.319	NaN	6619.1	30	0	1586.6	0.106				-1	 	0	57	453.7475952312973	905.4806375293946	2	453.74798583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3451	2831	6282
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6285	20.321	NaN	10823	30	0	3830.6	0.106	+			2976	ASFDKAKLK	9	73	504.29775537836235	1006.5809578235247	2	504.29766845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASFDKAKLK_	ENSG00000034510|ENST00000233143|TMSB10	109.47833844074708	0.029530294723441826	2				NaN	NaN	0	NaN	3452	2831	6282
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6286	20.323	NaN	5975.5	30	0	715.99	0.106				-1	 	0	70	444.7607443800573	887.5069358269146	2	444.7610168457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3453	2831	6282
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6287	20.324	NaN	6780.8	30	0	1513.8	0.106	+			3470	ASSAPPLTGK	10	62	464.75803103729976	927.5015091413995	2	464.7583312988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASSAPPLTGK_	ENSG00000100105|ENST00000266269|PATZ1;nc|ENSG00000100105|Q9HBE1-2|PATZ1;nc|ENSG00000100105|Q9HBE1-3|PATZ1;nc|ENSG00000100105|Q9HBE1-4|PATZ1;PATZ1|p.G285Pfs*14|1|0.11|ENSG00000100105|chr22:31344749-31344750|CC/-|frameshift_variant	45.02220120713402	0.5028680121232791	2				NaN	NaN	0	NaN	3454	2831	6282
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6288	20.326	NaN	4505.9	30	0	552.96	0.035	+			13072	GFIPTYPAN	9	64	490.24720652941517	NaN	0	490.2471923828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GFIPTYPAN_	ENSG00000275066|ENST00000612223|SYNRG;nc|ENSG00000275066|Q9UMZ2-3|SYNRG;nc|ENSG00000275066|Q9UMZ2-4|SYNRG;nc|ENSG00000275066|Q9UMZ2-5|SYNRG;nc|ENSG00000275066|Q9UMZ2-7|SYNRG;nc|ENSG00000275066|Q9UMZ2-8|SYNRG;nc|ENSG00000275066|Q9UMZ2-9|SYNRG;SYNRG|p.N610Tfs*3|2|0.33|ENSG00000275066|chr17:37553894-37553894|T/-|frameshift_variant	44.116797842482775	0.2472372736944149	2				NaN	NaN	0	NaN	3455	2831	6282
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6289	20.327	NaN	5327.5	30	0	1933.6	0.139			+	12289	GCEECRYP	8	65	478.68436800190096	955.354183070602	2	478.6850280761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GCEECRYP_	REV__ENSG00000118620|ENST00000261560|ZNF430;REV__ENSG00000118620|ENST00000261560|ZNF430;REV__ENSG00000147789|ENST00000532777|ZNF7;REV__ENSG00000159882|ENST00000429154|ZNF230;REV__ENSG00000160352|ENST00000456283|ZNF714;REV__ENSG00000169131|ENST00000335815|ZNF354A;REV__ENSG00000182111|ENST00000420713|ZNF716;REV__ENSG00000185177|ENST00000319636|ZNF479;REV__ENSG00000186777|ENST00000419098|ZNF732;REV__ENSG00000186777|ENST00000419098|ZNF732;REV__ENSG00000196172|ENST00000402377|ZNF681;REV__ENSG00000196705|ENST00000311048|ZNF431;REV__ENSG00000197020|ENST00000358296|ZNF100;REV__ENSG00000197123|ENST00000421025|ZNF679;REV__ENSG00000223614|ENST00000429565|ZNF735;REV__ENSG00000241149|ENST00000330020|ZNF722;REV__ENSG00000256294|ENST00000262894|ZNF225;REV__ENSG00000256771|ENST00000589717|ZNF253;REV__ENSG00000256771|ENST00000589717|ZNF253;REV__ENST00000585568.5_1_19:44513139-44515613:+|nuORF;REV__ENST00000600692.5_1_19:21350445-21366834:+|nuORF;REV__ENST00000601416.1_19:21281704-21301132:+|nuORF;REV__nc|ENSG00000147789|P17097-2|ZNF7;REV__nc|ENSG00000160352|Q96N38-2|ZNF714;REV__nc|ENSG00000160352|Q96N38-3|ZNF714;REV__nc|ENSG00000160352|Q96N38|ZNF714;REV__nc|ENSG00000196172|Q96N22-2|ZNF681;REV__nc|ENSG00000256771|O75346-2|ZNF253;REV__nc|ENSG00000256771|O75346-2|ZNF253;REV__ZNF479|p.K332Afs*2|1|0.05|ENSG00000185177|chr7:57120421-57120422|-/AGGC|frameshift_variant	25.450171626174864	0.7628259754767981	2				NaN	NaN	0	NaN	3456	2831	6282
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6307	20.366	NaN	28819	30	0	14376	0.214	+			12358	GDPTYAFNIR	10	60	385.19202450099453	1152.5542441031837	3	385.1924133300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GDPTYAFNIR_	ENSG00000173064|ENST00000682272|HECTD4;ENST00000547085.1_1_12:112600816-112607652:-|nuORF;HECTD4|p.A4187Pfs*44|1|0.07|ENSG00000173064|chr12:112163201-112163201|C/-|frameshift_variant;nc|ENSG00000173064|Q9Y4D8-4|HECTD4;nc|ENSG00000173064|Q9Y4D8|HECTD4	32.75053402867276	0.6123771875927935	2				NaN	NaN	0	NaN	3471	2834	6306
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6308	20.37	NaN	29949	30	0	3388.4	0.106	+			12881	GERLFPLSRSL	11	107	425.5791997909167	1273.71576997295	3	425.5796813964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GERLFPLSRSL_	ENST00000349155.6_3_12:115121244-115121814:-|nuORF	66.96192283764107	0.2613103798769313	2				NaN	NaN	0	NaN	3472	2834	6306
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6309	20.372	NaN	5565.2	30	0	937.91	0.106	+			50216	WNFVMIKK	8	70	533.2997073271924	1064.5848617211848	2	533.3009643554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_WNFVMIKK_	ENSG00000175105|ENST00000636215|ZNF654	57.81127852772723	0.5234495074909924	2				NaN	NaN	0	NaN	3473	2834	6306
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6310	20.374	NaN	8931	30	0	939.96	0.106	+			42467	TAMNGNLAK	9	68	460.2386105742852	918.4626682153704	2	460.2366027832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TAMNGNLAK_	ENSG00000184675|ENST00000374869|AMER1	93.19546047674547	0.05585629608842056	2				NaN	NaN	0	NaN	3474	2834	6306
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6311	20.375	NaN	7196.1	30	0	1699.2	0.106				-1	 	0	48	356.1925619624559	1065.5558564875678	3	356.1927185058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3475	2834	6306
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6312	20.377	NaN	7333.8	30	0	2694.6	0.106	+			7410	DEKKAGPL	8	63	429.2401123276079	856.4656717220158	2	429.24005126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DEKKAGPL_	ENSG00000110400|ENST00000264025|NECTIN1	44.53106598305862	0.628196326904373	2				NaN	NaN	0	NaN	3476	2834	6306
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6313	20.379	NaN	6373.2	30	0	655.86	0.036	+			37938	SPEEQAKTY	9	66	526.7477964512727	1051.4810399693454	2	526.748779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SPEEQAKTY_	ENSG00000243725|ENST00000371281|TTC4;ENST00000486621.1_1_1:55181548-55183334:+|nuORF;TTC4|p.D84G|1|0.21|ENSG00000243725|chr1:54717513-54717513|A/G|missense_variant	131.61620852596164	0.014413238321579053	2				NaN	NaN	0	NaN	3477	2834	6306
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6329	20.413	NaN	34466	30	0	4549.3	0.214	+			26321	LSVVNQLR	8	88	464.78190112903803	927.5492493248761	2	464.7821960449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSVVNQLR_	ENSG00000104442|ENST00000276569|ARMC1;ENST00000523384.1_1_8:66525632-66539633:-|nuORF	82.30502934623384	0.30436709589983096	2				NaN	NaN	0	NaN	3490	2837	6328
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6330	20.416	NaN	33869	30	0	12599	0.106	+			16973	HPQQKVAVY	9	73	535.292923232004	1068.571293530808	2	535.2935180664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HPQQKVAVY_	ENSG00000102871|ENST00000345057|TRADD;ENST00000566104.1_1_16:67189803-67193780:-|nuORF	131.03138772384656	0.014687601201650916	2				NaN	NaN	0	NaN	3491	2837	6328
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6331	20.418	NaN	44772	30	0	5885.5	0.106				-1	 	0	93	451.75025295789754	901.4859529825951	2	451.75054931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3492	2837	6328
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6332	20.42	NaN	21703	30	0	1663.9	0.106	+			16187	HEAQHGVTSL	10	77	539.7666415839077	1077.5187302346153	2	539.7680053710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HEAQHGVTSL_	ENSG00000100105|ENST00000266269|PATZ1;nc|ENSG00000100105|Q9HBE1-2|PATZ1;nc|ENSG00000100105|Q9HBE1-3|PATZ1;nc|ENSG00000100105|Q9HBE1-4|PATZ1	166.0711670676379	0.0049346292030699205	2				NaN	NaN	0	NaN	3493	2837	6328
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6333	20.422	NaN	13996	30	0	1570.1	0.106	+			39058	SSSQPIGVTK	10	80	502.27425052866136	1002.5339481241227	2	502.2745361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSSQPIGVTK_	ENSG00000274070|ENST00000616305|CASTOR2	116.83681978309235	0.03179725977375137	2				NaN	NaN	0	NaN	3494	2837	6328
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6334	20.424	NaN	44368	30	0	13708	0.037			+	35986	SEHLHFVVK	9	77	365.86935868031844	1094.5862466411554	3	365.86968994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SEHLHFVVK_	REV__ENSG00000171843|ENST00000380338|MLLT3;REV__ENST00000475957.1_1_9:20414418-20622255:-|nuORF;REV__MLLT3|p.R298Gfs*19|3|0.38|ENSG00000171843|chr9:20413954-20413954|T/-|frameshift_variant;REV__nc|ENSG00000171843|P42568-2|MLLT3	63.30626980617807	0.18605348971131092	2				NaN	NaN	0	NaN	3495	2837	6328
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6335	20.424	NaN	8574.2	30	0	3300.3	0.138				-1	 	0	60	431.2367309361823	860.4589089391646	2	431.2371520996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3496	2837	6328
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6350	20.458	NaN	93250	30	0	16371	0.198	+			37800	SMDGHPSR	8	95	451.6927198795805	901.3708868259611	2	451.6930236816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_SM(Oxidation (M))DGHPSR_	AGO4|p.E724Kfs*16|1|0.24|ENSG00000134698|chr1:35841744-35841745|AG/-|frameshift_variant;ENSG00000134698|ENST00000373210|AGO4	53.351449002276354	0.5676011784961348	2				NaN	NaN	0	NaN	3508	2840	6349
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6351	20.461	NaN	36578	30	0	6886	0.106				-1	 	0	75	519.7875866317657	1037.5606203303314	2	519.7883911132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3509	2840	6349
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6352	20.463	NaN	15797	30	0	4120.1	0.106				-1	 	0	71	441.7372271211577	881.4599013091154	2	441.7373352050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3510	2840	6349
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6353	20.465	NaN	19444	30	0	3904.5	0.106				-1	 	0	66	491.27682908452687	980.5391052358538	2	491.27734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3511	2840	6349
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6354	20.467	NaN	17522	30	0	3013.4	0.106				-1	 	0	80	553.8131460791793	1105.6117392251585	2	553.8140869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3512	2840	6349
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6355	20.468	NaN	6076.8	30	0	2967.6	0.106				-1	KMLNKKHCI	9	51	391.21885017086515	1170.6347211127954	3	391.21917724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_KMLNKKHC(Carbamidomethyl (C))I_	ENSG00000112701|ENST00000447266|SENP6;nc|ENSG00000112701|Q9GZR1-2|SENP6;SENP6|p.G1004Efs*11|4|0.34|ENSG00000112701|chr6:75713700-75713700|A/-|frameshift_variant;SENP6|p.I864*|1|0.21|ENSG00000112701|chr6:75702940-75702940|A/-|frameshift_variant	25.57405402267927	0.5642445186134241	2				NaN	NaN	0	NaN	3513	2840	6349
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6356	20.47	NaN	11869	30	0	3143.5	0.032				-1	 	0	66	412.2185589649462	822.4225649966925	2	412.21893310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3514	2840	6349
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6372	20.504	NaN	92229	30	0	10113	0.191	+			27735	MQNMSIHTK	9	116	363.843641112299	1088.509093937097	3	363.84417724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MQNMSIHTK_	CON__H-INV:HIT000292931;CON__P05787;CON__REFSEQ:XP_092267;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	120.8684288430529	0.02067403653475984	2				NaN	NaN	0	NaN	3527	2843	6371
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6373	20.507	NaN	26793	30	0	6307.5	0.106				-1	LGMLGLRACPR	11	73	401.5541902898525	1201.6407414697576	3	401.5543212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LGM(Oxidation (M))LGLRACPR_	ENST00000464833.1_1_3:184102666-184104037:+|nuORF	24.231819034082204	0.7356191775841856	2				NaN	NaN	0	NaN	3528	2843	6371
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6374	20.509	NaN	8326.1	30	0	2744.1	0.106			+	37125	SITKTASYR	9	50	342.8571400197157	1025.5495906593471	3	342.8573303222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SITKTASYR_	REV__ENSG00000179148|ENST00000448843|ALOXE3;REV__nc|ENSG00000179148|Q9BYJ1-2|ALOXE3	17.364965105453717	0.6112419832031293	2				NaN	NaN	0	NaN	3529	2843	6371
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6375	20.511	NaN	7008.5	30	0	1053.7	0.106	+			17349	IAKGGAAL	8	53	350.72092909637115	699.4273052595423	2	350.72119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IAKGGAAL_	ENSG00000104413|ENST00000433389|ESRP1;ESRP1|p.L333Sfs*55|1|0.35|ENSG00000104413|chr8:94668009-94668009|G/-|frameshift_variant;ESRP1|p.N512Hfs*7|2|0.33|ENSG00000104413|chr8:94674383-94674384|AA/-|frameshift_variant;ESRP1|p.N512Kfs*8|1|0.48|ENSG00000104413|chr8:94674382-94674383|-/A|frameshift_variant;ESRP1|p.N512Tfs*2|2|0.36|ENSG00000104413|chr8:94674383-94674383|A/-|frameshift_variant;nc|ENSG00000104413|Q6NXG1-2|ESRP1;nc|ENSG00000104413|Q6NXG1-3|ESRP1;nc|ENSG00000104413|Q6NXG1-4|ESRP1;nc|ENSG00000104413|Q6NXG1-5|ESRP1	96.04771818265245	0.25916207331555047	2				NaN	NaN	0	NaN	3530	2843	6371
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6376	20.513	NaN	10126	30	0	5141.4	0.106	+			8913	EEVKDRCTL	9	66	575.2813333161868	1148.5481136991734	2	575.2825317382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_EEVKDRC(Carbamidomethyl (C))TL_	ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65622809-65623088:-|nuORF	61.691277971877994	0.19951612995419254	2				NaN	NaN	0	NaN	3531	2843	6371
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6377	20.514	NaN	3953.9	30	0	546.54	0.106	+			38252	SQNGENFCK	9	76	513.7185684306501	1025.4225839281	2	513.718994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SQNGENFCK_	ENSG00000163072|ENST00000317647|NOSTRIN;nc|ENSG00000163072|Q8IVI9-2|NOSTRIN;nc|ENSG00000163072|Q8IVI9-4|NOSTRIN;NOSTRIN|p.K461Rfs*5|1|0.24|ENSG00000163072|chr2:168862044-168862044|A/-|frameshift_variant;NOSTRIN|p.L407*|1|0.21|ENSG00000163072|chr2:168860830-168860830|T/-|frameshift_variant;NOSTRIN|p.N191Kfs*36|1|0.15|ENSG00000163072|chr2:168843052-168843053|-/A|frameshift_variant;NOSTRIN|p.N191Tfs*9|1|0.33|ENSG00000163072|chr2:168843053-168843053|A/-|frameshift_variant	80.45461616416974	0.09558281504443908	2				NaN	NaN	0	NaN	3532	2843	6371
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6378	20.516	NaN	2679.8	30	0	279.72	0.036			+	10481	EVQSNRLFA	9	67	532.2790993012704	1062.5436456693408	2	532.2802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EVQSNRLFA_	REV__ENSG00000145113|ENST00000463781|MUC4;REV__ENST00000464234.5_1_3:195474049-195480138:-|nuORF;REV__nc|ENSG00000145113|Q99102-10|MUC4;REV__nc|ENSG00000145113|Q99102-12|MUC4;REV__nc|ENSG00000145113|Q99102-13|MUC4;REV__nc|ENSG00000145113|Q99102-17|MUC4	35.61828744233558	0.47037581924408073	2				NaN	NaN	0	NaN	3533	2843	6371
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6392	20.545	NaN	9065.4	30	0	1632.7	0.214			+	19205	KAAEPDRF	8	79	467.24291097358156	932.4712690139631	2	467.2430725097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAAEPDRF_	REV__CON__A2I7N0	65.80317337860623	0.44433089765398776	2				NaN	NaN	0	NaN	3544	2846	6391
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6393	20.548	NaN	8547.4	30	0	881.42	0.106	+			34360	RTQIPMSEK	9	72	545.2889178234263	1088.5632827136526	2	545.2902221679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RTQIPMSEK_	ENSG00000169435|ENST00000307439|RASSF6;nc|ENSG00000169435|Q6ZTQ3-3|RASSF6;nc|ENSG00000169435|Q6ZTQ3-4|RASSF6;nc|ENSG00000169435|Q6ZTQ3|RASSF6;RASSF6|p.K253Nfs*25|1|0.16|ENSG00000169435|chr4:73582195-73582195|T/-|frameshift_variant	136.48854661914896	0.012127429220575699	2				NaN	NaN	0	NaN	3545	2846	6391
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6394	20.55	NaN	12781	30	0	5321.6	0.106			+	35285	SALTMLGLCL	10	49	360.1925333995289	1077.5557707987866	3	360.19281005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SALTMLGLC(Carbamidomethyl (C))L_	REV__nc|ENSG00000180663|Q9BXE9|VN1R3	52.936696900407355	0.4300801048568001	2				NaN	NaN	0	NaN	3546	2846	6391
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6395	20.552	NaN	18369	30	0	6128.3	0.106	+			6481	AVYQARPQLHK	11	79	437.5820658891047	1309.7243682675141	3	437.58221435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVYQARPQLHK_	ENSG00000121060|ENST00000316881|TRIM25;TRIM25|p.A216Rfs*8|1|0.11|ENSG00000121060|chr17:56908515-56908515|C/-|frameshift_variant;TRIM25|p.R155Ffs*32|1|0.58|ENSG00000121060|chr17:56913526-56913527|-/GCGCAAA|frameshift_variant;TRIM25|p.S361Vfs*20|1|0.13|ENSG00000121060|chr17:56901426-56901426|G/-|frameshift_variant	38.753607047826485	0.5749975102143227	2				NaN	NaN	0	NaN	3547	2846	6391
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6396	20.554	NaN	3056.3	30	0	359.02	0.106			+	12091	GAARGVEACVA	11	61	530.7664443249383	NaN	0	530.766357421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_GAARGVEAC(Carbamidomethyl (C))VA_	REV__ENST00000434404.2_1_1:229406689-229407103:-|nuORF	52.936696900407355	0.2942262773185686	2				NaN	NaN	0	NaN	3548	2846	6391
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6397	20.556	NaN	2787.1	30	0	318.03	0.106			+	25778	LSALSAKG	8	45	373.7239074707031	NaN	0	373.7239074707031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSALSAKG_	REV__ENST00000423536.5_1_20:37049325-37049487:-|nuORF	60.97194046774394	1.7418937515398478	2				NaN	NaN	0	NaN	3549	2846	6391
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6398	20.558	NaN	8941.2	30	0	898.61	0.032				-1	 	0	69	405.72486770346177	809.4351824737236	2	405.72705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3550	2846	6391
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6412	20.588	NaN	26474	30	0	6689.6	0.214	+			39252	STAMNGNLAK	10	89	503.7522997762596	1005.4900466193192	2	503.75286865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STAMNGNLAK_	ENSG00000184675|ENST00000374869|AMER1	129.42129120953632	0.014023551377083414	2				NaN	NaN	0	NaN	3561	2849	6411
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6413	20.591	NaN	8453.5	30	0	1088.4	0.106	+			42639	TAVGSSTRY	9	68	471.2376452970655	940.460737660931	2	471.2377624511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAVGSSTRY_	ENSG00000173120|ENST00000529006|KDM2A;ENST00000524657.1_1_11:67020024-67022523:+|nuORF;nc|ENSG00000173120|Q9Y2K7-2|KDM2A;nc|ENSG00000173120|Q9Y2K7-4|KDM2A;nc|ENSG00000173120|Q9Y2K7-5|KDM2A	70.8162118820467	0.13725933411854815	2				NaN	NaN	0	NaN	3562	2849	6411
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6414	20.593	NaN	18880	30	0	5077.9	0.106	+			35216	SAKVTHLGLL	10	63	346.88140736420115	1037.6223926928035	3	346.88165283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAKVTHLGLL_	SNTA1|p.R500H|1|0.38|ENSG00000101400|chr20:33408526-33408526|C/T|missense_variant	56.43379154798735	0.3982744522255666	2				NaN	NaN	0	NaN	3563	2849	6411
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6415	20.595	NaN	11683	30	0	1266.6	0.106	+			1072	AEKYAKESL	9	68	519.7769428729638	1037.5393328127275	2	519.777587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEKYAKESL_	ENSG00000100567|ENST00000216455|PSMA3;ENST00000557290.1_1_14:58737043-58738610:+|nuORF;nc|ENSG00000100567|P25788-2|PSMA3	128.60217544463768	0.015992218256422188	2				NaN	NaN	0	NaN	3564	2849	6411
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6416	20.597	NaN	29515	30	0	9995.7	0.106				-1	 	0	83	432.2446425998985	862.474732266597	2	432.24493408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3565	2849	6411
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6417	20.599	NaN	22063	30	0	4671.5	0.036	+			14143	GSMRIFTKK	9	83	356.53874029119254	1066.5943914737777	3	356.5392150878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GSMRIFTKK_	ENSG00000168883|ENST00000323701|USP39;ENST00000459775.5_1_2:85848673-85875928:+|nuORF;ENST00000493829.5_1_2:85843459-85872221:+|nuORF;nc|ENSG00000168883|Q53GS9-2|USP39;nc|ENSG00000168883|Q53GS9-3|USP39	72.87924865735499	0.12833875048249987	2				NaN	NaN	0	NaN	3566	2849	6411
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6418	20.599	NaN	28350	30	0	6512.7	0.141				-1	 	0	90	548.839147762464	1095.663742591728	2	548.8402709960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3567	2849	6411
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6435	20.635	NaN	20313	30	0	1581.5	0.214	+			15983	HAKEENLSM	9	84	529.7495249820364	1057.4844970308727	2	529.7510375976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HAKEENLSM_	ENST00000558264.5_1_15:63353458-63363368:+|nuORF;nc|ENSG00000140416|P09493-2|TPM1;nc|ENSG00000140416|P09493-3|TPM1;nc|ENSG00000140416|P09493-7|TPM1;nc|ENSG00000140416|P09493-8|TPM1;nc|ENSG00000140416|P09493-9|TPM1	51.19269402634007	0.2889735674168909	2				NaN	NaN	0	NaN	3581	2852	6434
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6436	20.639	NaN	153550	30	0	106340	0.106	+			6472	AVYLSTCKDSK	11	90	424.5473078912961	1270.6200942740884	3	424.5478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_AVYLSTC(Carbamidomethyl (C))KDSK_	ENSG00000231925|ENST00000434618|TAPBP;nc|ENSG00000231925|O15533-3|TAPBP;nc|ENSG00000231925|O15533-4|TAPBP	63.42647028704847	0.292869158926425	2				NaN	NaN	0	NaN	3582	2852	6434
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6437	20.641	NaN	17944	30	0	5705.7	0.106	+			40268	STSPTSTPYLL	11	65	389.5361442080531	1165.5866032243594	3	389.53643798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STSPTSTPYLL_	ENSG00000162607|ENST00000339950|USP1	25.125986553469783	0.7262400895305658	2				NaN	NaN	0	NaN	3583	2852	6434
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6438	20.643	NaN	8458.6	30	0	1626.6	0.106	+			45728	VACGSAHTL	9	63	458.22087331973097	NaN	0	458.2207946777344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_VAC(Carbamidomethyl (C))GSAHTL_	ENSG00000128731|ENST00000261609|HERC2;HERC2|p.N4304S|1|0.12|ENSG00000128731|chr15:28125085-28125085|T/C|missense_variant	79.45101966838831	0.07326487554222888	2				NaN	NaN	0	NaN	3584	2852	6434
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6439	20.644	NaN	10892	30	0	2812.8	0.106			+	16914	HPLMGTPHCI	10	73	553.2668684417604	1104.5191839503207	2	553.267822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HPLMGTPHCI_	REV__ENST00000468655.1_1_19:49994004-49994437:+|nuORF	63.30626980617807	0.33577009411590547	2				NaN	NaN	0	NaN	3585	2852	6434
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6440	20.646	NaN	7043.7	30	0	627.11	0.034				-1	LDQMPPEE	8	68	487.7103762047387	973.4061994762774	2	487.71087646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_LDQM(Oxidation (M))PPEE_	nc|ENSG00000114026|O15527-7|OGG1	38.80614096846853	0.6637206697844082	2				NaN	NaN	0	NaN	3586	2852	6434
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6441	20.647	NaN	5964.5	30	0	861.46	0.139			+	9069	EGGRAKILS	9	65	465.77163831813766	NaN	0	465.7716064453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EGGRAKILS_	REV__DLEC1|p.S123G|1|0.29|ENSG00000008226|chr3:38039592-38039592|A/G|missense_variant	40.77816245573522	0.2702456086868081	2				NaN	NaN	0	NaN	3587	2852	6434
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6455	20.678	NaN	109980	30	0	24163	0.156				-1	 	0	94	497.78710233858686	993.5596517439737	2	497.78753662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3598	2855	6454
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6456	20.682	NaN	50167	30	0	46581	0.106			+	1349	AEVDEVRLGF	10	50	378.86459255933966	1133.571948278219	3	378.8648376464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEVDEVRLGF_	REV__ENSG00000100994|ENST00000216962|PYGB;REV__PYGB-C20orf152|1|fusion;REV__PYGB-C20orf152|2|fusion	30.503639358989545	0.6307262373768582	2				NaN	NaN	0	NaN	3599	2855	6454
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6457	20.684	NaN	45857	30	0	17413	0.106			+	3619	ASVSVYSLLTR	11	72	399.2269171609395	1194.6589220830185	3	399.2273254394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASVSVYSLLTR_	REV__PCDHGB7|p.S502L|1|0.45|ENSG00000254122|chr5:141419364-141419364|C/T|missense_variant	28.5767321226876	0.690044582712672	2				NaN	NaN	0	NaN	3600	2855	6454
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6458	20.686	NaN	12113	30	0	2285.4	0.106	+			8247	EAFRGVHRY	9	70	567.7939192403844	NaN	0	567.7940673828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EAFRGVHRY_	ENSG00000213719|ENST00000375784|CLIC1	99.37495909608758	0.022697614825424036	2				NaN	NaN	0	NaN	3601	2855	6454
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6459	20.687	NaN	7098.8	30	0	1761	0.106	+			47836	VSLAPQKGG	9	57	428.7477917718824	NaN	0	428.747802734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSLAPQKGG_	ENST00000485767.1_1_9:124072835-124073156:+|nuORF	60.97194046774394	0.14517358171632622	2				NaN	NaN	0	NaN	3602	2855	6454
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6460	20.689	NaN	12271	30	0	3412.1	0.106			+	-1	SFGGPCQTC	9	70	478.68436800190096	955.354183070602	2	478.68511962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_SFGGPC(Carbamidomethyl (C))QTC_	REV__ENSG00000010327|ENST00000321725|STAB1;REV__ENST00000481607.1_1_3:52529402-52542549:+|nuORF;REV__nc|ENSG00000010327|Q9NY15-2|STAB1;REV__STAB1|p.E1712Rfs*8|1|0.12|ENSG00000010327|chr3:52519356-52519357|-/C|frameshift_variant;REV__STAB1|p.F2001Lfs*111|1|0.35|ENSG00000010327|chr3:52521452-52521452|T/-|frameshift_variant;REV__STAB1|p.G1507Afs*84|1|0.26|ENSG00000010327|chr3:52517346-52517346|G/-|frameshift_variant;REV__STAB1|p.L1057Sfs*33|1|0.28|ENSG00000010327|chr3:52513135-52513136|-/T|frameshift_variant;REV__STAB1|p.P978Lfs*57|1|0.35|ENSG00000010327|chr3:52512385-52512385|C/-|frameshift_variant;REV__STAB1|p.R1122Pfs*37|1|0.37|ENSG00000010327|chr3:52513891-52513892|-/C|frameshift_variant;REV__STAB1|p.V800Cfs*113|1|0.34|ENSG00000010327|chr3:52509914-52509914|G/-|frameshift_variant	34.172542307311794	0.4838870758800184	2				NaN	NaN	0	NaN	3603	2855	6454
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6461	20.691	NaN	9553	30	0	3575.5	0.035	+			2977	ASFDKAKLK	9	68	504.29775537836235	1006.5809578235247	2	504.2977294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASFDKAKLK_	ENSG00000034510|ENST00000233143|TMSB10	93.5975768576971	0.05472259948179787	2				NaN	NaN	0	NaN	3604	2855	6454
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6477	20.724	NaN	30122	30	0	11853	0.214	+			36417	SETTAAHSL	9	78	458.7216114571802	915.4286699811604	2	458.72186279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SETTAAHSL_	ENSG00000119408|ENST00000320246|NEK6;nc|ENSG00000119408|Q9HC98-2|NEK6;nc|ENSG00000119408|Q9HC98-3|NEK6;nc|ENSG00000119408|Q9HC98-4|NEK6	138.8255168832474	0.011031062795199845	2				NaN	NaN	0	NaN	3617	2858	6476
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6478	20.728	NaN	10693	30	0	985.02	0.106	+			35240	SALGSSSYK	9	77	450.2265487582175	898.4385445832351	2	450.22686767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SALGSSSYK_	ENSG00000122965|ENST00000261741|RBM19;RBM19|p.F841Sfs*18|1|0.28|ENSG00000122965|chr12:113915007-113915007|G/-|frameshift_variant	41.42661286455405	0.403525789677298	2				NaN	NaN	0	NaN	3618	2858	6476
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6479	20.73	NaN	12819	30	0	6437.3	0.106	+			15068	GTPGTQAFYRV	11	49	399.5395853111329	1195.5969265335987	3	399.53997802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTPGTQAFYRV_	ENSG00000175262|ENST00000377004|C1orf127;nc|nan|Q8N9H9-2|C1orf127;nc|nan|Q8N9H9|C1orf127	31.529811441608018	0.6590691889962369	2				NaN	NaN	0	NaN	3619	2858	6476
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6480	20.732	NaN	4148.3	30	0	452.03	0.106			+	16221	HEDLEQKK	8	64	513.7638043441175	1025.5130557550349	2	513.7644653320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HEDLEQKK_	REV__ENSG00000101596|ENST00000320876|SMCHD1	58.78195531508484	0.5138399468736706	2				NaN	NaN	0	NaN	3620	2858	6476
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6481	20.734	NaN	9301.7	30	0	2168.2	0.106			+	17878	IGAPQSLVPG	10	63	469.76852723526235	937.5225015373247	2	469.7686462402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IGAPQSLVPG_	REV__ENSG00000141384|ENST00000269142|TAF4B;REV__ENST00000504528.2_1_4:113747508-113747850:+|nuORF;REV__nc|ENSG00000141384|Q92750-2|TAF4B	62.107414245175825	0.3466735403679669	2				NaN	NaN	0	NaN	3621	2858	6476
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6482	20.735	NaN	7280.5	30	0	2510.1	0.033				-1	 	0	71	421.2236833993218	840.4328138654437	2	421.2240905761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3622	2858	6476
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6483	20.736	NaN	7902.5	30	0	993.71	0.139			+	32414	QVFSLTHN	8	77	473.24404606508784	944.4735391969757	2	473.2444152832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QVFSLTHN_	REV__ENSG00000198825|ENST00000650623|INPP5F;REV__INPP5F|p.A917Qfs*71|1|0.07|ENSG00000198825|chr10:119827129-119827130|-/CAGAGTG|frameshift_variant;REV__INPP5F|p.K483Nfs*2|1|0.19|ENSG00000198825|chr10:119807935-119807935|A/-|frameshift_variant;REV__nc|ENSG00000198825|Q9Y2H2-2|INPP5F	57.81127852772723	0.5234495074909924	2				NaN	NaN	0	NaN	3623	2858	6476
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6501	20.775	NaN	16492	30	0	2274.4	0.214	+			36160	SEKVSHVL	8	82	449.75280185286505	897.4910507725301	2	449.75311279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEKVSHVL_	ENSG00000137076|ENST00000314888|TLN1;nc|ENSG00000137076|Q9Y490-2|TLN1	84.9155231211612	0.2928622555056503	2				NaN	NaN	0	NaN	3638	2861	6500
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6502	20.779	NaN	6217	30	0	1131.1	0.106			+	45683	VAADVNGPVK	10	81	485.27141826291705	968.5282835926341	2	485.27166748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VAADVNGPVK_	REV__ENSG00000151835|ENST00000382292|SACS;REV__ENST00000476776.1_1_13:23927912-23929028:-|nuORF;REV__SACS|p.A1848Qfs*2|1|0.1|ENSG00000151835|chr13:23338334-23338334|C/-|frameshift_variant;REV__SACS|p.I3485Lfs*10|1|0.24|ENSG00000151835|chr13:23333423-23333423|T/-|frameshift_variant;REV__SACS|p.K2931Nfs*22|1|0.23|ENSG00000151835|chr13:23335083-23335083|T/-|frameshift_variant;REV__SACS|p.K854Nfs*2|1|0.54|ENSG00000151835|chr13:23341314-23341314|T/-|frameshift_variant;REV__SACS|p.L2871Ffs*29|1|0.26|ENSG00000151835|chr13:23335263-23335264|-/A|frameshift_variant;REV__SACS|p.L3102*|1|0.33|ENSG00000151835|chr13:23334571-23334571|A/-|frameshift_variant;REV__SACS|p.P2063Sfs*7|1|0.36|ENSG00000151835|chr13:23337689-23337690|-/A|frameshift_variant;REV__SACS|p.S2058Ffs*2|1|0.3|ENSG00000151835|chr13:23337703-23337704|-/A|frameshift_variant;REV__SACS|p.S2058Lfs*19|1|0.1|ENSG00000151835|chr13:23337704-23337704|A/-|frameshift_variant;REV__SACS|p.S4423Ffs*42|1|0.18|ENSG00000151835|chr13:23330610-23330611|-/G|frameshift_variant	58.22992032128504	0.38193887838457763	2				NaN	NaN	0	NaN	3639	2861	6500
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6503	20.781	NaN	15732	30	0	3398.4	0.106			+	-1	SSSIKDAQRM	10	68	380.18892535047644	1137.5449466516293	3	380.1891174316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_SSSIKDAQRM(Oxidation (M))_	REV__ENSG00000075826|ENST00000370345|SEC31B;REV__ENST00000482456.6_1_10:102259886-102268850:-|nuORF;REV__nc|ENSG00000075826|Q9NQW1-4|SEC31B;REV__nc|ENSG00000075826|Q9NQW1-5|SEC31B	30.568863376406313	0.6301935916953115	2				NaN	NaN	0	NaN	3640	2861	6500
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6504	20.783	NaN	8209.8	30	0	3071.4	0.106			+	13289	GKADPEQWW	9	69	558.757460976568	1115.500369019936	2	558.7587280273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GKADPEQWW_	REV__ENSG00000141696|ENST00000393928|P3H4	30.317721548370564	0.5199124245378496	2				NaN	NaN	0	NaN	3641	2861	6500
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6505	20.785	NaN	4910.8	30	0	919.26	0.106			+	50500	YANEELTSK	9	60	527.7558643944803	1053.4971758557606	2	527.757568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YANEELTSK_	REV__ENSG00000166444|ENST00000313726|DENND2B;REV__ENST00000533425.5_1_11:8737213-8772268:-|nuORF;REV__nc|ENSG00000166444|P78524-2|DENND2B	42.86426827375447	0.38666266728046506	2				NaN	NaN	0	NaN	3642	2861	6500
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6506	20.786	NaN	9869.9	30	0	2472.2	0.032	+			49436	VVVGGGGVGK	10	60	414.7518246246738	NaN	0	414.7508239746094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VVVGGGGVGK_	ENSG00000126458|ENST00000246792|RRAS;ENSG00000133818|ENST00000256196|RRAS2;nc|ENSG00000133818|P62070-4|RRAS2	58.78195531508484	0.24422493511477816	2				NaN	NaN	0	NaN	3643	2861	6500
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6507	20.787	NaN	7837.3	30	0	862.32	0.141	+			27653	MPSHPDRAY	9	76	537.2444149284846	1072.4742769237691	2	537.2460327148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MPSHPDRAY_	ENSG00000161955|ENST00000338784|TNFSF13;nc|ENSG00000161955|O75888-2|TNFSF13;nc|ENSG00000161955|O75888-3|TNFSF13;nc|ENSG00000161955|O75888-4|TNFSF13;nc|ENSG00000161955|O75888-5|TNFSF13;nc|ENSG00000239697|O43508-2|TNFSF12	71.87747018426188	0.13267044672804276	2				NaN	NaN	0	NaN	3644	2861	6500
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6525	20.827	NaN	65511	30	0	24165	0.214				-1	 	0	81	425.2368129874011	848.4590730416022	2	425.2371826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3659	2864	6524
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6526	20.83	NaN	12363	30	0	3237.9	0.106				-1	 	0	70	441.7372271211577	881.4599013091154	2	441.7373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3660	2864	6524
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6527	20.832	NaN	26138	30	0	3800.1	0.106	+			38292	SQRSSELNTI	10	92	567.7939192403844	NaN	0	568.2799682617188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SQRSSELNTI_	ENSG00000071073|ENST00000393487|MGAT4A	69.6276240434122	0.15565754179716834	2				NaN	NaN	0	NaN	3661	2864	6524
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6528	20.834	NaN	14184	30	0	2294.7	0.106	+			29008	NSPEKACSL	9	74	503.23621197846154	1004.4578710237231	2	503.23687744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_NSPEKAC(Carbamidomethyl (C))SL_	ENSG00000164924|ENST00000395958|YWHAZ;ENSG00000166913|ENST00000353703|YWHAB;ENST00000399764.3_1_9:34922183-34922564:-|nuORF;ENST00000445359.1_1_9:38643302-38643692:+|nuORF;ENST00000479421.5_2_20:43531717-43535076:+|nuORF;ENST00000480304.5_1_8:101936173-101961117:-|nuORF;ENST00000517727.5_1_8:101936341-101962760:-|nuORF;nc|ENSG00000164924|P63104-2|YWHAZ;nc|ENSG00000166913|P31946-2|YWHAB	56.632244143249146	0.24168844994051353	2				NaN	NaN	0	NaN	3662	2864	6524
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6529	20.836	NaN	8713.8	30	0	772.17	0.106				-1	 	0	71	642.9566120546972	1925.8480067642913	3	642.9560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3663	2864	6524
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6530	20.837	NaN	8482.6	30	0	3081.7	0.036			+	32230	QTEKMQMGK	9	64	548.7590493933205	1095.503545853441	2	548.7603149414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_QTEKMQM(Oxidation (M))GK_	REV__ENST00000600534.1_1_19:59085324-59085477:+|nuORF	63.30626980617807	0.18605348971131092	2				NaN	NaN	0	NaN	3664	2864	6524
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6531	20.838	NaN	10941	30	0	3169	0.145				-1	GVCLFWSDL	9	77	366.1752195809678	1095.5038293431035	3	366.17559814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_GVC(Carbamidomethyl (C))LFWSDL_	ENST00000530781.5_1_1:26759153-26759494:+|nuORF	34.172542307311794	0.4838870758800184	2				NaN	NaN	0	NaN	3665	2864	6524
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6547	20.873	NaN	9647.3	30	0	4589.6	0.214				-1	ESKLSPCCVL	10	53	379.1884613479933	1134.54355464418	3	379.1888732910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_ESKLSPCC(Carbamidomethyl (C))VL_	ENST00000467747.1_1_2:97526365-97527817:-|nuORF;ENST00000474420.1_1_2:97526365-97527817:-|nuORF	35.15202426646627	0.5927656479315102	2				NaN	NaN	0	NaN	3678	2867	6546
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6548	20.877	NaN	4625.8	30	0	725.19	0.106			+	2709	AQSALQGGLR	10	71	500.7800673546481	NaN	0	500.78009033203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AQSALQGGLR_	REV__ENST00000285071.8_1_17:17116566-17116938:-|nuORF	62.107414245175825	0.217068727747531	2				NaN	NaN	0	NaN	3679	2867	6546
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6549	20.879	NaN	20924	30	0	1981.3	0.106	+			48819	VVAQTKAISG	10	91	487.28705787351265	972.5595628138253	2	487.2873840332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVAQTKAISG_	ENSG00000275395|ENST00000616721|FCGBP;FCGBP-ACSS2|1|fusion;nc|ENSG00000275395|Q9Y6R7|FCGBP	73.84112541714126	0.2459384371494077	2				NaN	NaN	0	NaN	3680	2867	6546
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6550	20.881	NaN	9150.1	30	0	1160	0.106	+			20885	KIQETFAQK	9	72	546.8055434226169	1091.5965339120337	2	546.8062744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KIQETFAQK_	ENST00000519940.5_1_19:48735037-48741646:-|nuORF	204.4243087208965	1.4601778531241419E-05	2				NaN	NaN	0	NaN	3681	2867	6546
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6551	20.883	NaN	10129	30	0	924.03	0.106	+			9993	ERLDKSEL	8	80	495.26613504016956	988.5177171471391	2	495.2664489746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ERLDKSEL_	ENST00000543087.5_1_11:18512432-18536353:-|nuORF	87.75429964447693	0.2842685068779738	2				NaN	NaN	0	NaN	3682	2867	6546
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6552	20.884	NaN	69094	30	0	27073	0.037	+			36786	SICGKMFKK	9	115	366.8642624182312	1097.5709578548935	3	366.86456298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_SIC(Carbamidomethyl (C))GKMFKK_	ENSG00000105732|ENST00000359044|ZNF574;nc|ENSG00000105732|Q6ZN55-2|ZNF574	66.96192283764107	0.15557981141143568	2				NaN	NaN	0	NaN	3683	2867	6546
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6553	20.885	NaN	2554.8	30	0	578.81	0.139	+			39393	STDNVSITK	9	63	482.75067138671875	NaN	0	482.75067138671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STDNVSITK_	ENSG00000133858|ENST00000378743|ZFC3H1;nc|ENSG00000133858|O60293-2|ZFC3H1;nc|ENSG00000133858|O60293-4|ZFC3H1;ZFC3H1|p.E1034Dfs*26|1|0.04|ENSG00000133858|chr12:71632230-71632231|-/AATAAAAATACTG|frameshift_variant;ZFC3H1|p.E390Nfs*4|1|0.39|ENSG00000133858|chr12:71644989-71644989|T/-|frameshift_variant;ZFC3H1|p.K385Nfs*9|5|0.36|ENSG00000133858|chr12:71645001-71645001|T/-|frameshift_variant;ZFC3H1|p.L1048*|1|0.18|ENSG00000133858|chr12:71632189-71632189|A/-|frameshift_variant;ZFC3H1|p.L1693Ffs*10|1|0.1|ENSG00000133858|chr12:71619380-71619381|-/A|frameshift_variant;ZFC3H1|p.V320Sfs*2|1|0.13|ENSG00000133858|chr12:71656942-71656943|-/T|frameshift_variant;ZFC3H1|p.V423Sfs*2|1|0.32|ENSG00000133858|chr12:71644889-71644890|-/T|frameshift_variant	59.93077597824379	0.14961415694175798	2				NaN	NaN	0	NaN	3684	2867	6546
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6566	20.914	NaN	15607	30	0	3184.1	0.215	+			19343	KAKLHAAEK	9	81	498.3040607880496	994.5935686428992	2	498.3047180175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAKLHAAEK_	ENSG00000197381|ENST00000348831|ADARB1;nc|ENSG00000197381|P78563-3|ADARB1;nc|ENSG00000197381|P78563-4|ADARB1;nc|ENSG00000197381|P78563-5|ADARB1;nc|ENSG00000197381|P78563-6|ADARB1;nc|ENSG00000197381|P78563|ADARB1	66.96192283764107	0.15557981141143568	2				NaN	NaN	0	NaN	3694	2870	6565
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6567	20.917	NaN	18811	30	0	11384	0.106	+			19290	KAFVGAFKK	9	73	332.5391963261037	994.5957595785112	3	332.5393981933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KAFVGAFKK_	ENSG00000160796|ENST00000450053|NBEAL2;NBEAL2|p.C1705Vfs*45|1|0.24|ENSG00000160796|chr3:47002246-47002246|T/-|frameshift_variant;NBEAL2|p.P1303Lfs*63|1|0.21|ENSG00000160796|chr3:47000002-47000002|C/-|frameshift_variant;NBEAL2|p.Y1346Tfs*20|1|0.44|ENSG00000160796|chr3:47000132-47000132|T/-|frameshift_variant;nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2;nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2	101.25262130126117	0.03792372629710479	2				NaN	NaN	0	NaN	3695	2870	6565
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6568	20.919	NaN	19272	30	0	4384.9	0.106				-1	 	0	76	468.7844992702173	935.5544456072346	2	468.7846374511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3696	2870	6565
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6569	20.921	NaN	45264	30	0	13242	0.106				-1	 	0	74	403.5588138860478	1207.6546122583434	3	403.5592041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3697	2870	6565
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6570	20.923	NaN	5981.4	30	0	1393	0.106				-1	 	0	64	458.7760436863725	915.537534439545	2	458.7763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3698	2870	6565
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6571	20.925	NaN	2149.3	30	0	1097.1	0.106			+	24887	LKKVLSDVA	9	34	324.8741960329683	971.600758699105	3	324.8744201660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LKKVLSDVA_	REV__ENSG00000120693|ENST00000379826|SMAD9;REV__nc|ENSG00000120693|O15198-2|SMAD9;REV__SMAD9|p.A424Cfs*2|1|0.07|ENSG00000120693|chr13:36848811-36848812|-/C|frameshift_variant	26.79610172149135	0.5528238334041078	2				NaN	NaN	0	NaN	3699	2870	6565
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6572	20.927	NaN	14786	30	0	3266.8	0.034				-1	 	0	76	473.7633541910287	945.5121554488575	2	473.763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3700	2870	6565
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6584	20.952	NaN	18031	30	0	5755.3	0.214	+			4809	ATNTSAPDLK	10	72	509.26379347827867	1016.5130340233574	2	509.2642517089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATNTSAPDLK_	ENSG00000047849|ENST00000683076|MAP4;MAP4|p.T960Qfs*35|1|0.3|ENSG00000047849|chr3:47869309-47869309|T/-|frameshift_variant;MAP4|p.V999*|1|0.25|ENSG00000047849|chr3:47867318-47867318|T/-|frameshift_variant;nc|ENSG00000047849|P27816-2|MAP4;nc|ENSG00000047849|P27816-4|MAP4;nc|ENSG00000047849|P27816-5|MAP4;nc|ENSG00000047849|P27816-6|MAP4;nc|ENSG00000047849|P27816|MAP4	174.8648734531126	0.002138720898421076	2				NaN	NaN	0	NaN	3709	2873	6583
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6585	20.956	NaN	11208	30	0	2293.3	0.106				-1	 	0	66	490.26332895173385	978.5121049702677	2	490.2637634277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3710	2873	6583
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6586	20.958	NaN	35587	30	0	17221	0.106			+	37093	SISKWQLK	8	70	495.29210528624003	988.5696576392801	2	495.2924499511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SISKWQLK_	REV__ENSG00000121749|ENST00000485960|TBC1D15;REV__ENST00000479971.1_1_12:72291642-72301148:+|nuORF;REV__ENST00000548679.5_1_12:72291037-72301659:+|nuORF;REV__nc|ENSG00000121749|Q8TC07-3|TBC1D15;REV__nc|ENSG00000121749|Q8TC07|TBC1D15;REV__TBC1D15|p.L440Ffs*8|1|0.12|ENSG00000121749|chr12:71907102-71907103|-/T|frameshift_variant	120.62098272573253	0.23366758524054274	2				NaN	NaN	0	NaN	3711	2873	6583
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6587	20.96	NaN	19734	30	0	2410.8	0.106			+	20893	KIQPRTWM	8	85	530.2922935474896	1058.5700341617792	2	530.293701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KIQPRTWM_	REV__ENSG00000182827|ENST00000366812|ACBD3	76.84663266511073	0.3498490246073164	2				NaN	NaN	0	NaN	3712	2873	6583
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6588	20.961	NaN	36720	30	0	8994.7	0.106				-1	ASWSTMAK	8	77	449.2113045351695	896.408056137139	2	449.2119445800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_ASWSTM(Oxidation (M))AK_	ENST00000461648.2_1_16:2098014-2103834:+|nuORF	60.97194046774394	0.49215940876911696	2				NaN	NaN	0	NaN	3713	2873	6583
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6589	20.963	NaN	9842.8	30	0	1828.6	0.035	+			46343	VEKPAETHL	9	67	512.2762963140649	1022.5380396949298	2	512.2771606445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VEKPAETHL_	ENSG00000198171|ENST00000354488|DDRGK1;nc|ENSG00000198171|Q96HY6-2|DDRGK1	82.7504851949679	0.08565546331141553	2				NaN	NaN	0	NaN	3714	2873	6583
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6590	20.964	NaN	5298	30	0	1537.9	0.141			+	21175	KKWMDFNT	8	67	543.2583096582581	1084.502066383316	2	543.2593994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_KKWM(Oxidation (M))DFNT_	REV__ENST00000261070.6_1_3:119388418-119388478:-|nuORF	42.396135135203025	0.6414440140393314	2				NaN	NaN	0	NaN	3715	2873	6583
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6602	20.99	NaN	26933	30	0	9199.3	0.214	+			38901	SSPLPSPAPS	10	75	470.24229445443996	938.4700359756799	2	470.2425231933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSPLPSPAPS_	ENSG00000188807|ENST00000340381|TMEM201;TMEM201|p.P547Lfs*38|1|0.31|ENSG00000188807|chr1:9610676-9610676|C/-|frameshift_variant	69.6276240434122	0.2803623802747859	2				NaN	NaN	0	NaN	3724	2876	6601
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6603	20.994	NaN	24526	30	0	13554	0.106	+			25059	LLKYRQSTL	9	56	374.5604407163014	1120.6594927491042	3	374.5606689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LLKYRQSTL_	ENSG00000150347|ENST00000279873|ARID5B;nc|ENSG00000150347|Q14865-3|ARID5B	29.14955571784316	0.5308295550522326	2				NaN	NaN	0	NaN	3725	2876	6601
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6604	20.996	NaN	12479	30	0	2417.5	0.106	+			35636	SCGPPGMTK	9	77	439.198257602992	876.381962272784	2	439.1986999511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SCGPPGMTK_	ENSG00000137857|ENST00000389037|DUOX1;ENSG00000140279|ENST00000389039|DUOX2;ENST00000561220.6_1_15:45434150-45457096:+|nuORF;nc|ENSG00000137857|Q9NRD9-2|DUOX1;nc|ENSG00000140279|Q9NRD8|DUOX2	80.45461616416974	0.09558281504443908	2				NaN	NaN	0	NaN	3726	2876	6601
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6605	20.998	NaN	11655	30	0	6913.6	0.106			+	13708	GPRVSSCL	8	57	409.71240902617194	817.4102651191439	2	409.7130126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GPRVSSCL_	REV__ENST00000509933.1_1_6:3231731-3231869:+|nuORF	25.450171626174864	0.7628259754767981	2				NaN	NaN	0	NaN	3727	2876	6601
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6606	21	NaN	6719.5	30	0	790.64	0.106	+			43953	TPEEDQRTY	9	78	569.7535460639441	1137.492539194688	2	569.7542724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TPEEDQRTY_	ENSG00000105771|ENST00000270066|SMG9;ENST00000595700.5_1_19:44242246-44254893:-|nuORF;nc|ENSG00000105771|Q9H0W8-2|SMG9;SMG9|p.H366Tfs*2|1|0.22|ENSG00000105771|chr19:43734395-43734395|G/-|frameshift_variant	127.46168284122857	0.016682644177004526	2				NaN	NaN	0	NaN	3728	2876	6601
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6607	21.001	NaN	14276	30	0	2463	0.106	+			39583	STGPTLQAR	9	79	465.7534804966592	929.4924080601185	2	465.7535400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STGPTLQAR_	CFTR|p.E1044Dfs*20|1|0.04|ENSG00000001626|chr7:117610661-117610662|-/TCAAAGAAAAC|frameshift_variant;CFTR|p.G1208Afs*3|1|0.3|ENSG00000001626|chr7:117627672-117627672|G/-|frameshift_variant;CFTR|p.L1258Ffs*7|1|0.26|ENSG00000001626|chr7:117642487-117642488|-/T|frameshift_variant;CFTR|p.S1297Lfs*31|1|0.28|ENSG00000001626|chr7:117652852-117652852|T/-|frameshift_variant;ENSG00000001626|ENST00000003084|CFTR;nc|ENSG00000001626|P13569-2|CFTR	67.49366992349736	0.1516260258713357	2				NaN	NaN	0	NaN	3729	2876	6601
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6608	21.003	NaN	1840.1	30	0	100.68	0.035	+			31878	QPYQTSLVI	9	56	524.7867802477076	1047.5590075622151	2	525.2903442382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QPYQTSLVI_	ENSG00000113716|ENST00000502717|HMGXB3	34.172542307311794	0.4838870758800184	2				NaN	NaN	0	NaN	3730	2876	6601
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6623	21.035	NaN	110670	30	0	27668	0.177				-1	 	0	90	450.2629452477092	898.5113375622184	2	450.26318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3742	2879	6622
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6624	21.038	NaN	264640	30	0	37905	0.106	+			6074	AVNAHSNILK	10	117	533.8027061977498	1065.5908594622995	2	533.8040161132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVNAHSNILK_	ENSG00000132305|ENST00000410111|IMMT;ENST00000409258.2_1_2:86386442-86398424:-|nuORF;ENST00000435590.1_1_21:46097057-46097849:-|nuORF;ENST00000474969.5_1_2:86385703-86422514:-|nuORF;ENST00000490238.5_1_2:86389097-86393741:-|nuORF;nc|ENSG00000132305|Q16891-2|IMMT;nc|ENSG00000132305|Q16891-3|IMMT;nc|ENSG00000132305|Q16891-4|IMMT	122.93914200107957	0.02317863035582428	2				NaN	NaN	0	NaN	3743	2879	6622
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6625	21.04	NaN	322460	30	0	209860	0.106				-1	 	0	108	356.2046142534558	1065.5920133605675	3	356.20489501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3744	2879	6622
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6626	21.042	NaN	62112	30	0	24995	0.106				-1	 	0	55	346.8571493039526	1037.5496185120578	3	346.8574523925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3745	2879	6622
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6627	21.043	NaN	9304.4	30	0	1671.7	0.106	+			89	AADCAHEL	8	63	443.6894131522638	885.3642733713276	2	443.689697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_AADC(Carbamidomethyl (C))AHEL_	ENSG00000157379|ENST00000288111|DHRS1;ENST00000558340.1_1_14:24760067-24761569:-|nuORF;ENST00000561137.5_1_14:24760413-24761527:-|nuORF;ENST00000561273.5_1_14:24760714-24761569:-|nuORF	71.29570347882199	0.39610197767395533	2				NaN	NaN	0	NaN	3746	2879	6622
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6628	21.045	NaN	46398	30	0	9813.4	0.106	+			16138	HEAEGHIVTC	10	81	548.2473572274346	1094.480161521669	2	548.2481079101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HEAEGHIVTC_	ENSG00000100028|ENST00000215829|SNRPD3;ENST00000468770.1_1_22:24953642-24953888:+|nuORF;nc|ENSG00000286070|P62318-2|SNRPD3	161.89823264540465	0.006261389671801122	2				NaN	NaN	0	NaN	3747	2879	6622
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6629	21.047	NaN	7262.8	30	0	2668.3	0.035	+			2978	ASFDKAKLK	9	68	504.29775537836235	1006.5809578235247	2	504.2977600097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASFDKAKLK_	ENSG00000034510|ENST00000233143|TMSB10	88.17693792209575	0.07000514020414955	2				NaN	NaN	0	NaN	3748	2879	6622
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6642	21.074	NaN	44771	30	0	6069.3	0.214				-1	 	0	92	531.2943740597875	1060.574195186375	2	531.295654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3758	2882	6641
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6643	21.077	NaN	22404	30	0	2702.7	0.106	+			19025	IWSKGSKSQ	9	93	340.8535445086304	1019.5388041260912	3	340.8538818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IWSKGSKSQ_	ENSG00000153107|ENST00000341068|ANAPC1;ENST00000426186.1_3_2:87098444-87121919:+|nuORF;ENST00000489177.1_1_2:112630836-112638411:-|nuORF	65.46538089061403	0.16805504838372562	2				NaN	NaN	0	NaN	3759	2882	6641
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6644	21.079	NaN	9288.8	30	0	2683.4	0.106			+	39587	STGREQGRHSK	11	65	414.8818183963445	1241.6236257892335	3	414.8822937011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STGREQGRHSK_	REV__ENSG00000133619|ENST00000496259|KRBA1;REV__KRBA1|p.I622Sfs*4|1|0.09|ENSG00000133619|chr7:149730195-149730195|G/-|frameshift_variant;REV__KRBA1|p.Q367Nfs*25|1|0.31|ENSG00000133619|chr7:149724818-149724818|C/-|frameshift_variant;REV__nc|ENSG00000133619|A5PL33-2|KRBA1;REV__nc|ENSG00000133619|A5PL33-3|KRBA1;REV__nc|ENSG00000133619|A5PL33|KRBA1	22.561587123415745	0.7531385481947795	2				NaN	NaN	0	NaN	3760	2882	6641
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6645	21.081	NaN	7226.1	30	0	2143.8	0.106			+	43678	TKEAVNPI	8	70	436.24755461730194	870.4805563014039	2	436.24786376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TKEAVNPI_	REV__ENSG00000164690|ENST00000297261|SHH	51.33545320467046	0.5859736979383976	2				NaN	NaN	0	NaN	3761	2882	6641
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6646	21.083	NaN	5022.2	30	0	555.45	0.106	+			6421	AVVSGESCPGK	11	70	517.2518111155877	1032.4890692979752	2	517.2529907226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVVSGESCPGK_	ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;ENST00000574894.1_1_16:16367711-16371421:+|nuORF;nc|ENSG00000185164|Q5JPE7-3|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2;NOMO1|p.P1102Hfs*42|1|0.36|ENSG00000103512|chr16:14886838-14886838|C/-|frameshift_variant	89.02883481214508	0.10275031849113642	2				NaN	NaN	0	NaN	3762	2882	6641
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6647	21.085	NaN	5024.5	30	0	465.33	0.106	+			1147	AEMKAQEV	8	72	453.222960262884	904.431367592568	2	453.22308349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEMKAQEV_	ENSG00000108592|ENST00000427159|FTSJ3;ENST00000580376.5_1_17:61901002-61901722:-|nuORF	64.20726635412375	0.4601301477144759	2				NaN	NaN	0	NaN	3763	2882	6641
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6648	21.087	NaN	13475	30	0	1797.5	0.035	+			37552	SLMFLSLSQ	9	83	513.2722467134363	NaN	0	513.2728271484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SLMFLSLSQ_	ENSG00000172023|ENST00000305089|REG1B	62.107414245175825	0.1403307765918332	2				NaN	NaN	0	NaN	3764	2882	6641
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6662	21.116	NaN	18722	30	0	5259.1	0.214	+			39309	STATATVSVGK	11	85	511.27933498701424	1020.5441170408285	2	511.27972412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STATATVSVGK_	ENSG00000261150|ENST00000615648|EPPK1;EPPK1|p.G2015Vfs*36|2|0.33|ENSG00000261150|chr8:143867210-143867210|C/-|frameshift_variant;EPPK1|p.Q829Rfs*8|1|0.05|ENSG00000261150|chr8:143870770-143870770|C/-|frameshift_variant;EPPK1|p.Y695Ifs*68|1|0.36|ENSG00000261150|chr8:143871171-143871172|-/T|frameshift_variant	139.7601822506043	0.0005276873573507997	2				NaN	NaN	0	NaN	3775	2885	6661
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6663	21.12	NaN	12928	30	0	1232.2	0.106	+			2628	AQIKEHLLK	9	79	360.5570852707839	1078.6494264125517	3	360.5572204589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AQIKEHLLK_	EIF2B5|p.L605Pfs*9|1|0.26|ENSG00000145191|chr3:184143504-184143505|-/C|frameshift_variant;ENSG00000145191|ENST00000648915|EIF2B5;ENST00000481054.5_1_3:183853173-183856676:+|nuORF;ENST00000491144.5_1_3:183853173-183855624:+|nuORF	40.05817265558897	0.419577045485086	2				NaN	NaN	0	NaN	3776	2885	6661
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6664	21.122	NaN	9186.3	30	0	1254.5	0.106			+	39030	SSSLPPAKPS	10	77	485.76355700216294	969.5125610711259	2	485.7635192871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSSLPPAKPS_	REV__ENSG00000105732|ENST00000359044|ZNF574;REV__nc|ENSG00000105732|Q6ZN55-2|ZNF574	52.936696900407355	0.4300801048568001	2				NaN	NaN	0	NaN	3777	2885	6661
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6665	21.124	NaN	14017	30	0	1682.7	0.106	+			25505	LPSNGGHSY	9	81	466.216535645475	930.41851835775	2	466.216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LPSNGGHSY_	ENSG00000103241|ENST00000262426|FOXF1	84.9155231211612	0.07920012719736333	2				NaN	NaN	0	NaN	3778	2885	6661
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6666	21.125	NaN	3843.2	30	0	345	0.106				-1	KTFCLCKRL	9	67	584.8189907164784	1167.6234284997568	2	584.8195190429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_KTFCLC(Carbamidomethyl (C))KRL_	ANKRD36C|p.F1404Lfs*4|1|0.33|ENSG00000174501|chr2:95856049-95856049|A/-|frameshift_variant;ENSG00000174501|ENST00000295246|ANKRD36C;nc|ENSG00000174501|Q5JPF3-2|ANKRD36C;nc|ENSG00000174501|Q5JPF3|ANKRD36C	53.351449002276354	0.2690372970092375	2				NaN	NaN	0	NaN	3779	2885	6661
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6667	21.127	NaN	4722	30	0	544.29	0.106	+			42490	TANEANPLK	9	63	479.2534235698315	956.492294206463	2	479.2533874511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TANEANPLK_	ENSG00000187325|ENST00000341864|TAF9B	85.16082228582465	0.07850854922700509	2				NaN	NaN	0	NaN	3780	2885	6661
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6668	21.129	NaN	3204.3	30	0	184.81	0.035	+			764	AEEKPAPQM	9	71	500.74187893911363	NaN	0	500.7417907714844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AEEKPAPQM_	ENSG00000048828|ENST00000277165|FAM120A;nc|ENSG00000048828|Q9NZB2-4|FAM120A;nc|ENSG00000048828|Q9NZB2-6|FAM120A	54.722347961057174	0.17414871455573902	2				NaN	NaN	0	NaN	3781	2885	6661
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6681	21.157	NaN	19915	30	0	4109.2	0.214			+	8587	EAYVYSRIQLL	11	89	452.2508400396242	1353.7306907190728	3	452.25128173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EAYVYSRIQLL_	REV__ENSG00000054793|ENST00000338821|ATP9A	37.50817390946774	0.5920388381045607	2				NaN	NaN	0	NaN	3791	2888	6680
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6682	21.16	NaN	8951	30	0	1767.6	0.106	+			32258	QTLLHVSK	8	72	463.2763627120698	924.5381724909396	2	463.276611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QTLLHVSK_	ARHGAP10|p.K252Ifs*56|1|0.04|ENSG00000071205|chr4:147875072-147875073|-/TTTT|frameshift_variant	69.6276240434122	0.4100012001731381	2				NaN	NaN	0	NaN	3792	2888	6680
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6683	21.162	NaN	22798	30	0	8381	0.106	+			20783	KIADMGHLK	9	66	338.1915023773769	1011.5526777323307	3	338.1917419433594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KIADMGHLK_	ENSG00000132646|ENST00000379143|PCNA	75.04331003522576	0.118981335847003	2				NaN	NaN	0	NaN	3793	2888	6680
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6684	21.164	NaN	18369	30	0	2014.3	0.106	+			33436	RILACGVAK	9	84	494.29156306789207	986.5685732025842	2	494.2918395996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_RILAC(Carbamidomethyl (C))GVAK_	ENSG00000265972|ENST00000582401|TXNIP	122.1759843771914	0.019882474861609503	2				NaN	NaN	0	NaN	3794	2888	6680
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6685	21.166	NaN	8252.2	30	0	3260.3	0.106	+			18623	ISSSGVIAPG	10	69	444.2449697419723	886.4753865507446	2	444.24505615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ISSSGVIAPG_	APOB|p.A2932Pfs*19|1|0.36|ENSG00000084674|chr2:21008074-21008074|C/-|frameshift_variant;APOB|p.G1921Efs*13|1|0.19|ENSG00000084674|chr2:21011106-21011106|C/-|frameshift_variant;APOB|p.K4541Sfs*8|1|0.34|ENSG00000084674|chr2:21001800-21001800|T/-|frameshift_variant;APOB|p.M1189*|1|0.34|ENSG00000084674|chr2:21015204-21015204|T/-|frameshift_variant;APOB|p.S3866Yfs*21|1|0.06|ENSG00000084674|chr2:21005271-21005272|-/TAAGAAAT|frameshift_variant;APOB|p.Y2149Vfs*2|2|0.29|ENSG00000084674|chr2:21010424-21010425|-/T|frameshift_variant;ENSG00000084674|ENST00000233242|APOB	42.396135135203025	0.5270658956260207	2				NaN	NaN	0	NaN	3795	2888	6680
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6686	21.168	NaN	13850	30	0	2407	0.035	+			20784	KIADMGHLK	9	67	506.7835905671838	1011.5526282011676	2	506.7842712402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KIADMGHLK_	ENSG00000132646|ENST00000379143|PCNA	117.81106730687013	0.02252488733980868	2				NaN	NaN	0	NaN	3796	2888	6680
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6687	21.168	NaN	3087.5	30	0	427.7	0.141	+			19381	KALWNYLSQ	9	65	561.8010002743944	NaN	0	561.8008422851562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KALWNYLSQ_	ENSG00000135912|ENST00000392102|TTLL4;ENST00000465558.5_1_2:219612840-219617731:+|nuORF	64.20726635412375	0.13137488984569443	2				NaN	NaN	0	NaN	3797	2888	6680
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6700	21.198	NaN	23131	30	0	3741.3	0.214	+			40643	SVAQTVVQK	9	76	480.2791319313182	958.5437109294364	2	480.279541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVAQTVVQK_	ENSG00000057294|ENST00000340811|PKP2;nc|ENSG00000057294|Q99959|PKP2	186.41076107051632	0.0006524797715399015	2				NaN	NaN	0	NaN	3807	2891	6699
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6701	21.201	NaN	35159	30	0	21733	0.106	+			571	ADHPVISTALG	11	68	360.8611192401525	1079.5615283206575	3	360.8613586425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ADHPVISTALG_	ENST00000605573.1_1_3:187870847-187870946:-|nuORF	26.69291269510374	0.70980431218767	2				NaN	NaN	0	NaN	3808	2891	6699
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6702	21.203	NaN	7351.4	30	0	1262.3	0.106	+			4795	ATNNMNLSR	9	68	510.7483210750271	NaN	0	510.7483825683594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATNNMNLSR_	ENSG00000092148|ENST00000399332|HECTD1;ENST00000556004.1_1_14:31596982-31597923:-|nuORF;HECTD1|p.F2271Lfs*13|1|0.16|ENSG00000092148|chr14:31107059-31107059|A/-|frameshift_variant;HECTD1|p.I2041Lfs*27|1|0.36|ENSG00000092148|chr14:31113133-31113133|T/-|frameshift_variant;HECTD1|p.N1559H|1|0.32|ENSG00000092148|chr14:31128696-31128696|T/G|missense_variant	84.81729255234993	0.05487683669228034	2				NaN	NaN	0	NaN	3809	2891	6699
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6703	21.205	NaN	52808	30	0	27260	0.106				-1	 	0	84	389.54701545970374	1165.6192169793112	3	389.54736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3810	2891	6699
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6704	21.207	NaN	11317	30	0	1393.4	0.106	+			24060	LEIKSTVKAL	10	79	367.9005088406666	1100.6796971221997	3	367.9007568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LEIKSTVKAL_	RSPH1|p.G23Vfs*120|1|0.4|ENSG00000160188|chr21:42493066-42493066|C/-|frameshift_variant	56.43379154798735	0.3982744522255666	2				NaN	NaN	0	NaN	3811	2891	6699
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6705	21.208	NaN	18970	30	0	2964.3	0.106			+	16594	HGGFAIRH	8	71	447.7380390332364	893.4615251332729	2	447.7383117675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HGGFAIRH_	REV__SMC1A|p.R626H|1|0.58|ENSG00000072501|chrX:53405527-53405527|C/T|missense_variant	74.51659920185547	0.36926395944126233	2				NaN	NaN	0	NaN	3812	2891	6699
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6706	21.21	NaN	37536	30	0	5887.9	0.037			+	23348	KYTNLFNKL	9	90	380.88495888429713	1139.6330472530915	3	380.8851318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KYTNLFNKL_	REV__tr|U7T606|U7T606_FUSNUHTHdeoR-typedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00043PE=4SV=1	30.503639358989545	0.5181749237905803	2				NaN	NaN	0	NaN	3813	2891	6699
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6720	21.24	NaN	162240	30	0	26697	0.214				-1	 	0	110	405.7446736519088	809.4747943706176	2	405.7451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3824	2894	6719
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6721	21.244	NaN	83218	30	0	27713	0.106				-1	 	0	74	399.2345682940201	796.4545836548402	2	399.2348937988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3825	2894	6719
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6722	21.246	NaN	90725	30	0	15160	0.106				-1	DMTSRSRRL	9	90	379.8644475310217	1136.5715131932652	3	379.86474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_DM(Oxidation (M))TSRSRRL_	ENSG00000168754|ENST00000490605|FAM178B;FAM178B|p.A733Gfs*2|1|0.12|ENSG00000168754|chr2:96893950-96893951|-/T|frameshift_variant	32.81241826257853	0.4965981579233955	2				NaN	NaN	0	NaN	3826	2894	6719
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6723	21.248	NaN	44225	30	0	13112	0.106				-1	 	0	98	358.2044155062086	1071.5914171188258	3	358.2046813964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3827	2894	6719
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6724	21.249	NaN	66842	30	0	9794.1	0.106				-1	 	0	118	392.2307319708866	1173.6703665128598	3	392.2310791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3828	2894	6719
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6725	21.251	NaN	5843.4	30	0	1177.1	0.034	+			45652	TYSVKDSVA	9	65	485.2467430708001	968.4789332084002	2	485.2477111816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TYSVKDSVA_	ENSG00000184166|ENST00000641833|OR1D2	51.33545320467046	0.2872990594074956	2				NaN	NaN	0	NaN	3829	2894	6719
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6726	21.252	NaN	1522.3	30	0	147.37	0.142			+	22637	KTVKLIAGEEA	11	62	579.8398243338698	1157.6650957345396	2	579.8405151367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KTVKLIAGEEA_	REV__ENSG00000188282|ENST00000697321|RUFY4;REV__nc|ENSG00000188282|Q6ZNE9-3|RUFY4;REV__RUFY4|p.E426Rfs*11|1|0.38|ENSG00000188282|chr2:218076453-218076453|T/-|frameshift_variant	65.15724298150197	0.2774196309614691	2				NaN	NaN	0	NaN	3830	2894	6719
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6744	21.291	NaN	161470	30	0	27405	0.214			+	-1	LMGLMKLKK	9	120	359.8887103003178	1076.6443015011534	3	359.8890075683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LMGLM(Oxidation (M))KLKK_	REV__ENSG00000204478|ENST00000602960|PRAMEF20;REV__PRAMEF20|p.S248Pfs*27|1|0.36|ENSG00000204478|chr1:13418574-13418574|T/-|frameshift_variant	39.252832667884924	0.4290233611298554	2				NaN	NaN	0	NaN	3845	2897	6743
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6745	21.295	NaN	72144	30	0	13949	0.106			+	-1	PMKSGPMKSCS	11	112	414.5146440550905	1240.5221027654716	3	414.51544189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),2 Oxidation (M)	_PM(Oxidation (M))KSGPM(Oxidation (M))KSC(Carbamidomethyl (C))S_	REV__ENST00000414296.2_1_7:29781809-29781908:+|nuORF	41.080066990542036	0.5431644350485484	2				NaN	NaN	0	NaN	3846	2897	6743
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6746	21.297	NaN	53904	30	0	31795	0.106				-1	 	0	91	539.3292299056274	1076.6439068780546	2	539.3301391601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3847	2897	6743
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6747	21.299	NaN	8109.4	30	0	1019	0.106				-1	 	0	77	618.6052687258436	1852.7939767777307	3	618.6050415039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3848	2897	6743
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6748	21.3	NaN	15328	30	0	4808.8	0.106				-1	 	0	80	499.71183077782604	997.4091086224521	2	499.712158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3849	2897	6743
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6749	21.302	NaN	16877	30	0	7081.2	0.037	+			25499	LPSHTKIKY	9	67	362.88134665632447	1085.6222105691734	3	362.88153076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LPSHTKIKY_	CWC15|p.P93Afs*12|1|0.42|ENSG00000150316|chr11:94971034-94971035|-/T|frameshift_variant;ENSG00000150316|ENST00000279839|CWC15;ENST00000539856.5_1_11:94704113-94705349:-|nuORF	27.882242232435846	0.5426732730940306	2				NaN	NaN	0	NaN	3850	2897	6743
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6750	21.303	NaN	27850	30	0	4227.8	0.139	+			35771	SEADKIKVA	9	81	480.7708608262126	959.5271687192252	2	480.7713928222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SEADKIKVA_	ENSG00000178035|ENST00000326739|IMPDH2;ENST00000466147.5_1_3:49062090-49062580:-|nuORF;ENST00000484872.1_1_3:49061926-49062670:-|nuORF	112.41091882917199	0.026537921851008135	2				NaN	NaN	0	NaN	3851	2897	6743
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6764	21.333	NaN	15932	30	0	2288.2	0.214				-1	 	0	69	322.51003391196735	964.5082723361021	3	322.5102233886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3862	2900	6763
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6765	21.337	NaN	7060.4	30	0	699.85	0.106			+	30460	QAASKHLKAF	10	79	550.8134412147458	1099.6123294962915	2	550.8145751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QAASKHLKAF_	REV__ENSG00000268629|ENST00000600991|TEX13A	79.71258880314673	0.19796908725841375	2				NaN	NaN	0	NaN	3863	2900	6763
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6766	21.339	NaN	17638	30	0	5213.9	0.106	+			44724	TTLNSPPLKK	10	70	366.8887820005873	1097.6445166019619	3	366.888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TTLNSPPLKK_	B2M|p.V69Wfs*34|1|0.32|ENSG00000166710|chr15:44715555-44715555|A/-|frameshift_variant	62.107414245175825	0.3466735403679669	2				NaN	NaN	0	NaN	3864	2900	6763
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6767	21.341	NaN	8760.4	30	0	1863.8	0.106	+			2874	ASASASLPTK	10	66	466.7556883221812	931.4968237111624	2	466.7558898925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASASASLPTK_	ENSG00000141568|ENST00000335255|FOXK2;ENST00000473637.6_1_17:80553997-80559372:+|nuORF;ENST00000529652.1_1_17:80558017-80559372:+|nuORF;ENST00000571989.1_1_17:80551586-80559372:+|nuORF	120.27252224102466	0.026944837168485097	2				NaN	NaN	0	NaN	3865	2900	6763
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6768	21.342	NaN	2855.6	30	0	272.53	0.106				-1	NKCFQGGGKI	10	58	554.7800139711161	1107.545475009032	2	555.7860107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_NKC(Carbamidomethyl (C))FQGGGKI_	L1MB4_dup8350|chr19:41723212-41723669:-|1.3793009716132458|0.0459558965036179|4.91|476.0|15|3|sense	34.172542307311794	0.6007644933930345	2				NaN	NaN	0	NaN	3866	2900	6763
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6769	21.344	NaN	6042.7	30	0	692.76	0.106			+	31436	QKPPPAAP	8	65	403.2316283026181	804.4487036720362	2	403.2319030761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QKPPPAAP_	REV__ENSG00000184922|ENST00000331495|FMNL1;REV__FMNL1|p.A81Rfs*23|1|0.23|ENSG00000184922|chr17:45232387-45232388|-/C|frameshift_variant;REV__nc|ENSG00000184922|O95466-2|FMNL1;REV__nc|ENSG00000184922|O95466-3|FMNL1	44.53106598305862	0.628196326904373	2				NaN	NaN	0	NaN	3867	2900	6763
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6770	21.346	NaN	3071	30	0	340.78	0.034	+			48569	VTQAPISAR	9	63	471.77174375854224	941.5289345838845	2	471.7718811035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VTQAPISAR_	ENSG00000101407|ENST00000373447|TTI1	42.86426827375447	0.38666266728046506	2				NaN	NaN	0	NaN	3868	2900	6763
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6783	21.373	NaN	17973	30	0	9110.4	0.214				-1	 	0	56	326.8585072377593	977.5536923134779	3	326.85870361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3878	2903	6782
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6784	21.377	NaN	15965	30	0	2739.1	0.106	+			6009	AVMDNKNPTIK	11	87	615.8291333354299	1229.6437137376597	2	615.8291625976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVMDNKNPTIK_	CKAP5|p.K1126Rfs*25|1|0.46|ENSG00000175216|chr11:46767609-46767609|T/-|frameshift_variant;CKAP5|p.V1971Lfs*42|1|0.03|ENSG00000175216|chr11:46744211-46744212|-/TTGAAAAAAAG|frameshift_variant;ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5	174.2255066215824	1.68701546401974E-05	2				NaN	NaN	0	NaN	3879	2903	6782
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6785	21.379	NaN	8887	30	0	919	0.106	+			35035	SADKTVRVY	9	68	519.7821176677658	1037.5496824023314	2	519.7827758789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SADKTVRVY_	ENSG00000103994|ENST00000564754|ZNF106;nc|ENSG00000103994|Q9H2Y7-2|ZNF106;nc|ENSG00000103994|Q9H2Y7|ZNF106	109.47833844074708	0.029530294723441826	2				NaN	NaN	0	NaN	3880	2903	6782
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6786	21.38	NaN	4200.6	30	0	439.31	0.106			+	10712	FAATLTGK	8	57	404.73130467360187	807.4480564140038	2	404.7315979003906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FAATLTGK_	REV__ENSG00000151148|ENST00000342494|UBE3B;REV__ENST00000540230.5_1_12:109928780-109928933:+|nuORF;REV__nc|ENSG00000151148|Q7Z3V4-2|UBE3B;REV__UBE3B|p.F731Lfs*71|1|0.07|ENSG00000151148|chr12:109521260-109521260|T/-|frameshift_variant;REV__UBE3B|p.S234Y|1|0.35|ENSG00000151148|chr12:109491115-109491115|C/A|missense_variant	53.351449002276354	0.5676011784961348	2				NaN	NaN	0	NaN	3881	2903	6782
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6787	21.382	NaN	3821.3	30	0	1453	0.106				-1	 	0	45	339.22149035762084	1014.6426416730626	3	339.2216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3882	2903	6782
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6788	21.384	NaN	18651	30	0	7356.8	0.035	+			14960	GTMTGMLYK	9	65	517.2375418804536	1032.460530827707	2	517.23828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Oxidation (M)	_GTM(Oxidation (M))TGM(Oxidation (M))LYK_	ENSG00000178440|ENST00000651763|TIMM23B-AGAP6;ENSG00000204152|ENST00000651259|TIMM23B;ENSG00000265354|ENST00000580018|TIMM23;nc|ENSG00000204152|Q5SRD1-2|TIMM23B	95.81516180277367	0.04847050768394289	2				NaN	NaN	0	NaN	3883	2903	6782
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6789	21.385	NaN	6291.8	30	0	1248.5	0.139				-1	 	0	65	460.2397526071693	459.2324761405693	1	460.23968505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3884	2903	6782
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6802	21.414	NaN	110270	30	0	22686	0.215				-1	 	0	87	477.74774407208264	953.4809352109653	2	477.7478942871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3894	2906	6801
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6803	21.417	NaN	64412	30	0	39204	0.106	+			35373	SAPSRATAL	9	78	437.2424786357194	872.4704043382388	2	437.2428894042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAPSRATAL_	ENSG00000155729|ENST00000359878|KCTD18;nc|ENSG00000155729|Q6PI47-3|KCTD18	61.691277971877994	0.19951612995419254	2				NaN	NaN	0	NaN	3895	2906	6801
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6804	21.419	NaN	25942	30	0	4613	0.106	+			35803	SEAPGQRAL	9	80	464.74559720153627	927.4766414698726	2	464.7457275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEAPGQRAL_	ENSG00000114867|ENST00000346169|EIF4G1;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;ENST00000460829.5_1_3:184046782-184052693:+|nuORF;ENST00000478291.1_1_3:184049262-184049734:+|nuORF;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1	87.69643885390035	0.07135982304947239	2				NaN	NaN	0	NaN	3896	2906	6801
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6805	21.421	NaN	23852	30	0	4399	0.106				-1	 	0	88	451.7684589797988	901.5223650263977	2	451.7687683105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3897	2906	6801
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6806	21.423	NaN	38483	30	0	10210	0.106	+			37816	SMNANTITK	9	80	490.24700915989814	978.4794653865963	2	490.2474060058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SMNANTITK_	ENSG00000175467|ENST00000312397|SART1	171.33049012695201	0.0025398094975457087	2				NaN	NaN	0	NaN	3898	2906	6801
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6807	21.425	NaN	16703	30	0	6336.6	0.036	+			30752	QDNKNPHVT	9	73	526.7596603875926	1051.504767841985	2	526.7608032226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QDNKNPHVT_	ENSG00000138778|ENST00000265148|CENPE;nc|ENSG00000138778|Q02224-3|CENPE	49.44154591367651	0.3095138337212152	2				NaN	NaN	0	NaN	3899	2906	6801
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6808	21.425	NaN	14443	30	0	4994.4	0.145			+	47921	VSLSILEPKQ	10	77	371.8880756900985	1112.6423976704955	3	371.8877258300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VSLSILEPKQ_	REV__ENSG00000283599|ENST00000636096|unknown	31.529811441608018	0.6223461015008678	2				NaN	NaN	0	NaN	3900	2906	6801
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6821	21.455	NaN	118250	30	0	34296	0.214				-1	 	0	90	458.75799251032083	915.5014320874417	2	458.75836181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3910	2909	6820
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6822	21.458	NaN	154700	30	0	116900	0.106	+			40910	SVFQQGMKNK	10	77	389.5372700721776	1165.5899808167328	3	389.5376892089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVFQQGMKNK_	ENSG00000018625|ENST00000361216|ATP1A2;ENSG00000105409|ENST00000648268|ATP1A3;ENSG00000163399|ENST00000295598|ATP1A1;ENST00000479960.1_1_1:116943772-116944278:+|nuORF;nc|ENSG00000105409|P13637-2|ATP1A3;nc|ENSG00000105409|P13637-3|ATP1A3;nc|ENSG00000163399|P05023-3|ATP1A1;nc|ENSG00000163399|P05023-4|ATP1A1	68.62578634547417	0.2885473079336931	2				NaN	NaN	0	NaN	3911	2909	6820
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6823	21.46	NaN	22092	30	0	11940	0.106	+			50648	YEDLTAKDIEE	11	68	663.3090467077315	1324.6035404822628	2	663.3076782226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YEDLTAKDIEE_	ENSG00000178127|ENST00000318388|NDUFV2	51.19269402634007	0.4047928213175833	2				NaN	NaN	0	NaN	3912	2909	6820
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6824	21.462	NaN	43004	30	0	11660	0.106	+			4492	ATITDKEMLKK	11	94	426.57548353462954	1276.7046212040887	3	426.57586669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATITDKEMLKK_	ANKRD17|p.L2249Yfs*84|1|0.34|ENSG00000132466|chr4:73090884-73090884|G/-|frameshift_variant;ENSG00000132466|ENST00000358602|ANKRD17;ENST00000514252.1_1_4:73978989-74017230:-|nuORF;nc|ENSG00000132466|O75179-2|ANKRD17;nc|ENSG00000132466|O75179-6|ANKRD17;nc|ENSG00000132466|O75179-7|ANKRD17	57.885488727062594	0.3423300441360433	2				NaN	NaN	0	NaN	3913	2909	6820
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6825	21.464	NaN	5639.1	30	0	864.27	0.106	+			17677	IEKPVKEAM	9	71	522.7919484030099	1043.5693438728197	2	522.7921142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IEKPVKEAM_	ENSG00000012779|ENST00000374391|ALOX5;nc|ENSG00000012779|P09917-2|ALOX5;nc|ENSG00000012779|P09917-3|ALOX5	76.16968421966216	0.11411088698345859	2				NaN	NaN	0	NaN	3914	2909	6820
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6826	21.466	NaN	10700	30	0	948.26	0.04			+	29240	NWFFINGHYQ	10	68	442.54037274705036	1324.5992888413512	3	442.5407409667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NWFFINGHYQ_	REV__ENSG00000176927|ENST00000394835|EFCAB5;REV__nc|ENSG00000176927|A4FU69-3|EFCAB5	42.396135135203025	0.5270658956260207	2				NaN	NaN	0	NaN	3915	2909	6820
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6827	21.466	NaN	38249	30	0	10423	0.142	+			48239	VTCSQVHFK	9	85	369.1863837060987	1104.537321718496	3	369.1866760253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_VTC(Carbamidomethyl (C))SQVHFK_	ENSG00000174442|ENST00000307897|ZWILCH;nc|ENSG00000174442|Q9H900-2|ZWILCH	46.45678178249821	0.34452392205506005	2				NaN	NaN	0	NaN	3916	2909	6820
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6841	21.498	NaN	7508.4	30	0	862.81	0.214	+			42619	TAVCHTDAY	9	66	519.2208325048191	1036.427112076438	2	519.2217407226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_TAVC(Carbamidomethyl (C))HTDAY_	ENSG00000197894|ENST00000296412|ADH5;ENST00000507102.5_2_4:100003111-100009857:-|nuORF;ENST00000508511.5_1_4:99997418-100009857:-|nuORF;ENST00000512621.5_1_4:99993722-100006301:-|nuORF	90.77665401227738	0.06267569666681755	2				NaN	NaN	0	NaN	3927	2912	6840
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6842	21.501	NaN	12259	30	0	2176.6	0.106	+			38541	SSEAPLVQK	9	73	479.7628434293219	957.5111339254438	2	479.76373291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSEAPLVQK_	ENSG00000054654|ENST00000555002|SYNE2;ENST00000557005.1_1_14:64490935-64514966:+|nuORF;nc|ENSG00000054654|Q8WXH0|SYNE2;SYNE2|p.A5240Qfs*5|1|0.07|ENSG00000054654|chr14:64152639-64152639|G/-|frameshift_variant;SYNE2|p.D3074Ffs*8|1|0.07|ENSG00000054654|chr14:64053132-64053133|-/TTTCTTTTTCAAATACTTG|frameshift_variant;SYNE2|p.F2563Ifs*28|1|0.34|ENSG00000054654|chr14:64051593-64051594|-/A|frameshift_variant;SYNE2|p.F2840Lfs*3|1|0.38|ENSG00000054654|chr14:64052427-64052427|T/-|frameshift_variant;SYNE2|p.F4992Lfs*13|1|0.39|ENSG00000054654|chr14:64140067-64140067|T/-|frameshift_variant;SYNE2|p.L5308Ifs*18|1|0.12|ENSG00000054654|chr14:64158750-64158751|GG/-|frameshift_variant;SYNE2|p.S6651Rfs*83|1|0.29|ENSG00000054654|chr14:64220596-64220597|-/G|frameshift_variant	95.81516180277367	0.04847050768394289	2				NaN	NaN	0	NaN	3928	2912	6840
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6843	21.503	NaN	9343	30	0	3544.7	0.106	+			39622	STICKYYQK	9	60	397.5334987186345	1189.5786667561035	3	397.533935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_STIC(Carbamidomethyl (C))KYYQK_	ENSG00000075975|ENST00000170447|MKRN2	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	3929	2912	6840
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6844	21.505	NaN	4332.8	30	0	562.98	0.106	+			12737	GEKVVKTAL	9	74	472.7921926826603	943.5698324321206	2	472.7923583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEKVVKTAL_	ENSG00000133835|ENST00000510025|HSD17B4;ENST00000511186.5_1_5:118788168-118811542:+|nuORF;ENST00000515235.6_1_5:118788237-118827866:+|nuORF;HSD17B4|p.L703Ifs*15|1|0.06|ENSG00000133835|chr5:119536530-119536531|-/GAAAAATA|frameshift_variant;nc|ENSG00000133835|P51659-2|HSD17B4;nc|ENSG00000133835|P51659-3|HSD17B4	68.84614121027924	0.14577793175421136	2				NaN	NaN	0	NaN	3930	2912	6840
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6845	21.507	NaN	6763.2	30	0	1560.5	0.106	+			50734	YEKDDKLTP	9	69	554.7800139711161	1107.545475009032	2	554.7802124023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YEKDDKLTP_	ENSG00000092820|ENST00000367075|EZR	76.16968421966216	0.11411088698345859	2				NaN	NaN	0	NaN	3931	2912	6840
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6846	21.509	NaN	6596.4	30	0	2151.3	0.035	+			20487	KEYQKAIK	8	70	504.29775537836235	1006.5809578235247	2	504.29791259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KEYQKAIK_	tr|U7SVZ1|U7SVZ1_FUSNUHTHhxlR-typedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01394PE=4SV=1	95.81516180277367	0.2598660847282228	2				NaN	NaN	0	NaN	3932	2912	6840
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6847	21.509	NaN	9251.8	30	0	4948.7	0.138	+			38896	SSPEKAASL	9	58	445.234678529928	888.454804126656	2	445.23486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSPEKAASL_	ENSG00000125505|ENST00000245615|MBOAT7;nc|ENSG00000125505|Q96N66-2|MBOAT7;nc|ENSG00000125505|Q96N66-3|MBOAT7	61.691277971877994	0.19951612995419254	2				NaN	NaN	0	NaN	3933	2912	6840
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6862	21.543	NaN	18532	30	0	2602.4	0.214			+	26000	LSKLQLHSS	9	84	506.7923660430102	1011.5701791528204	2	506.7928771972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSKLQLHSS_	REV__ENSG00000142207|ENST00000382751|URB1	87.75429964447693	0.0711966946989736	2				NaN	NaN	0	NaN	3945	2915	6861
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6863	21.547	NaN	6424.9	30	0	1845.1	0.106			+	47199	VLYNNELQ	8	61	496.75550825710786	991.4964635810157	2	496.7574768066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VLYNNELQ_	REV__ENSG00000170571|ENST00000303221|EMB;REV__ENST00000505896.5_1_5:49695109-49707239:-|nuORF;REV__nc|ENSG00000170571|Q6PCB8-2|EMB	57.81127852772723	0.5234495074909924	2				NaN	NaN	0	NaN	3946	2915	6861
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6864	21.549	NaN	21660	30	0	5228.5	0.106	+			45920	VAQRDPIIAK	10	72	370.89203927559026	1109.6542884269709	3	370.8923645019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VAQRDPIIAK_	ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC;PRKDC|p.K3681Nfs*6|1|0.32|ENSG00000253729|chr8:47785174-47785177|TTCT/-|frameshift_variant;PRKDC|p.M3670*|1|0.5|ENSG00000253729|chr8:47785212-47785212|T/-|frameshift_variant;PRKDC|p.M3846Cfs*12|1|0.13|ENSG00000253729|chr8:47779047-47779047|T/-|frameshift_variant;PRKDC|p.M4020Cfs*2|1|0.31|ENSG00000253729|chr8:47776968-47776968|T/-|frameshift_variant;PRKDC|p.N3605Kfs*3|1|0.22|ENSG00000253729|chr8:47788993-47788994|-/T|frameshift_variant;PRKDC|p.N4037Ifs*15|1|0.17|ENSG00000253729|chr8:47776916-47776916|T/-|frameshift_variant;PRKDC|p.S3402Ifs*16|1|0.04|ENSG00000253729|chr8:47799302-47799303|-/AAACCGTGAGTTAGAGGAGGTAA|frameshift_variant;PRKDC|p.S4099Qfs*6|1|0.25|ENSG00000253729|chr8:47774265-47774265|A/-|frameshift_variant;PRKDC|p.T3268Pfs*7|1|0.5|ENSG00000253729|chr8:47803426-47803426|T/-|frameshift_variant;PRKDC|p.W3401Cfs*4|1|0.01|ENSG00000253729|chr8:47799304-47799305|-/AATGAATA|frameshift_variant	58.22992032128504	0.38193887838457763	2				NaN	NaN	0	NaN	3947	2915	6861
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6865	21.55	NaN	4935.5	30	0	775.85	0.106	+			16832	HPDSVSSSY	9	60	489.71123915679203	977.4079253803841	2	489.7115783691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HPDSVSSSY_	ENSG00000148396|ENST00000684901|SEC16A;nc|ENSG00000148396|O15027-2|SEC16A;nc|ENSG00000148396|O15027-3|SEC16A;nc|ENSG00000148396|O15027-4|SEC16A;nc|ENSG00000148396|O15027-5|SEC16A;SEC16A|p.P2155Hfs*25|1|0.25|ENSG00000148396|chr9:136447664-136447664|G/-|frameshift_variant;SEC16A|p.P597Rfs*18|1|0.07|ENSG00000148396|chr9:136475826-136475826|G/-|frameshift_variant	60.97194046774394	0.20551255781574032	2				NaN	NaN	0	NaN	3948	2915	6861
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6866	21.552	NaN	8882.5	30	0	1306.5	0.106	+			16244	HEEKVFRAV	9	78	557.8031913567428	1113.5918297802855	2	557.8043212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HEEKVFRAV_	ENSG00000095139|ENST00000264028|ARCN1;nc|ENSG00000095139|P48444-2|ARCN1	138.06239232086	0.011389075116295402	2				NaN	NaN	0	NaN	3949	2915	6861
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6867	21.554	NaN	7637.2	30	0	2706.4	0.036			+	45229	TVPLPPVLDT	10	46	351.20606611912814	1050.5963689575844	3	351.2063293457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TVPLPPVLDT_	REV__ENSG00000129595|ENST00000261486|EPB41L4A;REV__ENST00000507810.5_1_5:111479536-111545647:-|nuORF	19.996771675451527	0.7148376616046445	2				NaN	NaN	0	NaN	3950	2915	6861
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6868	21.555	NaN	4356.5	30	0	506.02	0.139	+			30887	QEKKIRAA	8	65	472.28761695178156	NaN	0	472.2875671386719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QEKKIRAA_	ENSG00000085511|ENST00000392142|MAP3K4;MAP3K4|p.K177Nfs*30|3|0.18|ENSG00000085511|chr6:161048797-161048797|A/-|frameshift_variant;MAP3K4|p.N160Kfs*27|1|0.22|ENSG00000085511|chr6:161048743-161048744|-/A|frameshift_variant;MAP3K4|p.N160Mfs*8|3|0.32|ENSG00000085511|chr6:161048744-161048744|A/-|frameshift_variant;MAP3K4|p.S178Ifs*9|1|0.42|ENSG00000085511|chr6:161048796-161048797|-/A|frameshift_variant;nc|ENSG00000085511|Q9Y6R4-2|MAP3K4	58.78195531508484	1.7418937515398478	2				NaN	NaN	0	NaN	3951	2915	6861
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6884	21.59	NaN	12378	30	0	3653	0.214	+			45319	TVSESGTATLK	11	75	547.2898796696712	1092.5652064061424	2	547.2909545898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVSESGTATLK_	ENSG00000188112|ENST00000341865|C6orf132;nc|nan|Q5T0Z8-2|C6orf132;nc|nan|Q5T0Z8-4|C6orf132	125.68205650279488	0.009258456973060042	2				NaN	NaN	0	NaN	3964	2918	6883
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6885	21.593	NaN	41019	30	0	14293	0.106				-1	 	0	78	411.7208945881357	821.4272362430714	2	411.7213134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3965	2918	6883
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6886	21.595	NaN	16187	30	0	3932.9	0.106				-1	 	0	60	379.7236075251033	757.4326621170067	2	379.72393798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3966	2918	6883
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6887	21.597	NaN	9527.4	30	0	3932	0.106	+			31281	QICDTYNQK	9	72	585.2656844108064	1168.5168158884128	2	585.2667846679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_QIC(Carbamidomethyl (C))DTYNQK_	ENSG00000165175|ENST00000614558|MID1IP1	110.11987700582712	0.028875675806141952	2				NaN	NaN	0	NaN	3967	2918	6883
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6888	21.599	NaN	12595	30	0	2267.5	0.106				-1	 	0	67	451.2525018316018	900.4904507300037	2	451.2528381347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3968	2918	6883
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6889	21.601	NaN	4850.9	30	0	942.45	0.037	+			38167	SQCDSPYVTK	10	62	592.7658419827985	1183.517131032397	2	592.7664184570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_SQC(Carbamidomethyl (C))DSPYVTK_	ENSG00000102572|ENST00000539966|STK24;ENST00000481288.1_1_13:99161185-99171658:-|nuORF;nc|ENSG00000102572|Q9Y6E0|STK24	110.54063921016906	0.04639402190081153	2				NaN	NaN	0	NaN	3969	2918	6883
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6890	21.601	NaN	13491	30	0	8671.3	0.141				-1	 	0	62	422.72921712381304	843.4438813144261	2	422.7297058105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3970	2918	6883
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6905	21.635	NaN	185310	30	0	54348	0.172				-1	 	0	116	368.2199812819141	1101.6381144459424	3	368.2203369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3982	2921	6904
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6906	21.638	NaN	45964	30	0	10012	0.106				-1	 	0	78	405.87831496687147	1214.6131155008145	3	405.878662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3983	2921	6904
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6907	21.64	NaN	25870	30	0	7296.3	0.106	+			5053	ATSGVVAVR	9	64	430.25292203660103	858.4912911400021	2	430.25335693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATSGVVAVR_	ENSG00000074054|ENST00000696935|CLASP1;nc|ENSG00000074054|Q7Z460-2|CLASP1;nc|ENSG00000074054|Q7Z460-3|CLASP1;nc|ENSG00000074054|Q7Z460-4|CLASP1;nc|ENSG00000074054|Q7Z460-5|CLASP1;nc|ENSG00000074054|Q7Z460|CLASP1	157.32903759742106	0.0051608477690748295	2				NaN	NaN	0	NaN	3984	2921	6904
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6908	21.641	NaN	8823.9	30	0	2038.3	0.106			+	39556	STGGLLAAKG	10	68	437.75274077436654	873.4909286155331	2	437.7530517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STGGLLAAKG_	REV__CELSR1|p.G1602Vfs*104|1|0.17|ENSG00000075275|chr22:46410526-46410526|C/-|frameshift_variant	56.72105179125745	0.3956618550748046	2				NaN	NaN	0	NaN	3985	2921	6904
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6909	21.643	NaN	13953	30	0	2195.1	0.106	+			43595	TIKEGSQLK	9	83	502.29241820780743	NaN	0	502.2928466796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TIKEGSQLK_	ENSG00000100138|ENST00000401959|SNU13	109.43880257439609	0.010203938004363878	2				NaN	NaN	0	NaN	3986	2921	6904
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6910	21.645	NaN	3973.4	30	0	666.94	0.106	+			37625	SLQEARSF	8	64	469.23997468352405	936.4653964338481	2	469.24029541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLQEARSF_	ENSG00000012232|ENST00000220562|EXTL3;EXTL3|p.Y472Tfs*37|1|0.34|ENSG00000012232|chr8:28717468-28717468|T/-|frameshift_variant	44.116797842482775	0.6307669463330267	2				NaN	NaN	0	NaN	3987	2921	6904
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6911	21.647	NaN	8524.4	30	0	1088.3	0.036	+			34337	RTPPLDELQ	9	72	534.7880546938084	NaN	0	534.7880859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RTPPLDELQ_	ENSG00000143469|ENST00000367019|SYT14;nc|ENSG00000143469|Q8NB59-2|SYT14;nc|ENSG00000143469|Q8NB59-3|SYT14;nc|ENSG00000143469|Q8NB59-4|SYT14;nc|ENSG00000143469|Q8NB59-5|SYT14;nc|ENSG00000143469|Q8NB59-7|SYT14;nc|ENSG00000143469|Q8NB59|SYT14	71.87747018426188	0.0992163553043454	2				NaN	NaN	0	NaN	3988	2921	6904
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6925	21.675	NaN	36915	30	0	4438.8	0.214	+			15907	HAANQSYQY	9	81	541.237855079699	1080.4611572261979	2	541.2389526367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HAANQSYQY_	ENSG00000130402|ENST00000252699|ACTN4;ENST00000588618.5_1_19:39138385-39212431:+|nuORF;nc|ENSG00000130402|O43707-2|ACTN4;nc|ENSG00000130402|O43707-3|ACTN4	132.757866228626	0.013877640931359021	2				NaN	NaN	0	NaN	3999	2924	6924
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6926	21.679	NaN	8421.3	30	0	1864.5	0.106	+			46443	VESHIQHSL	9	70	525.2716286511891	1048.528704369178	2	525.272705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VESHIQHSL_	ENSG00000168612|ENST00000372523|ZSWIM1;ZSWIM1|p.P379Lfs*20|1|0.42|ENSG00000168612|chr20:45883724-45883724|C/-|frameshift_variant	101.25262130126117	0.03792372629710479	2				NaN	NaN	0	NaN	4000	2924	6924
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6927	21.681	NaN	8673.7	30	0	1308.6	0.106	+			38427	SSAKPGPAL	9	65	414.23417728166123	826.4538016301225	2	414.2345886230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSAKPGPAL_	ENSG00000186260|ENST00000571589|MRTFB;nc|ENSG00000186260|Q9ULH7-2|MRTFB;nc|ENSG00000186260|Q9ULH7-3|MRTFB;nc|ENSG00000186260|Q9ULH7-4|MRTFB;nc|ENSG00000186260|Q9ULH7|MRTFB	49.44154591367651	0.3095138337212152	2				NaN	NaN	0	NaN	4001	2924	6924
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6928	21.682	NaN	2797.6	30	0	563.79	0.106	+			25941	LSHRRGIVF	9	46	362.2162942295482	1083.6270532888448	3	362.21630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSHRRGIVF_	ENSG00000118017|ENST00000236709|A4GNT	25.450171626174864	0.5654022654467333	2				NaN	NaN	0	NaN	4002	2924	6924
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6929	21.684	NaN	5647.5	30	0	415.71	0.106				-1	DGWCKCILQGW	11	75	474.88294386724624	1421.6270022019387	3	474.8830261230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C)	_DGWC(Carbamidomethyl (C))KC(Carbamidomethyl (C))ILQGW_	ENST00000313766.5_7:300492-300642:+|nuORF	41.080066990542036	0.5431644350485484	2				NaN	NaN	0	NaN	4003	2924	6924
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6930	21.686	NaN	3706.7	30	0	503.9	0.033	+			12610	GEIDGNKV	8	63	416.2132696185028	830.4119863038056	2	416.2137756347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GEIDGNKV_	ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232319904-232323320:-|nuORF	42.396135135203025	0.6414440140393314	2				NaN	NaN	0	NaN	4004	2924	6924
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6931	21.687	NaN	4404.3	30	0	433.64	0.143			+	28437	NEVNVASMLSK	11	66	397.871129042205	1190.591557726815	3	397.8717956542969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NEVNVASMLSK_	REV__ENST00000435989.6_1_19:58384023-58384878:-|nuORF;REV__ENST00000435989.6_1_19:58384023-58384878:-|nuORF	102.95473732560676	0.05457861179418332	2				NaN	NaN	0	NaN	4005	2924	6924
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6946	21.72	NaN	410140	30	0	185110	0.153				-1	 	0	88	387.9040306692858	1160.6902626080575	3	387.9043884277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4017	2927	6945
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6947	21.723	NaN	35104	30	0	7325.6	0.106	+			4895	ATQGATEIVK	10	82	509.2818461197232	1016.5491393062464	2	509.2821350097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATQGATEIVK_	ENSG00000104321|ENST00000262209|TRPA1;TRPA1|p.G505Rfs*7|1|0.38|ENSG00000104321|chr8:72055452-72055453|-/T|frameshift_variant;TRPA1|p.L1023Ffs*15|1|0.42|ENSG00000104321|chr8:72023894-72023895|-/A|frameshift_variant;TRPA1|p.N377Ifs*25|1|0.08|ENSG00000104321|chr8:72056981-72056982|-/AAACTAATTTTGTTTATTA|frameshift_variant;TRPA1|p.T673Hfs*23|1|0.45|ENSG00000104321|chr8:72046557-72046557|T/-|frameshift_variant;TRPA1|p.Y327*|1|0.36|ENSG00000104321|chr8:72059399-72059402|TAAA/-|frameshift_variant	201.61192446435922	3.4460847431379217E-06	2				NaN	NaN	0	NaN	4018	2927	6945
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6948	21.725	NaN	9970.1	30	0	1167.1	0.106	+			25818	LSDEEKKK	8	73	488.76845885860735	975.5223647840147	2	488.76873779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSDEEKKK_	tr|U7T5R0|U7T5R0_FUSNUthreonineammonia-lyaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00142PE=4SV=1	90.77665401227738	0.27511901818546464	2				NaN	NaN	0	NaN	4019	2927	6945
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6949	21.727	NaN	10268	30	0	1615.9	0.106	+			3526	ASSLTQVTK	9	70	467.7637705054779	933.5129880777558	2	467.7635498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASSLTQVTK_	ENSG00000157741|ENST00000473989|UBN2;nc|ENSG00000157741|Q6ZU65-2|UBN2;UBN2|p.G1191Efs*28|1|0.17|ENSG00000157741|chr7:139284473-139284473|G/-|frameshift_variant;UBN2|p.S988Hfs*27|1|0.18|ENSG00000157741|chr7:139283862-139283862|C/-|frameshift_variant	109.43880257439609	0.029570636687953285	2				NaN	NaN	0	NaN	4020	2927	6945
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6950	21.729	NaN	4559.1	30	0	786.03	0.106			+	50974	YIKNKKGD	8	59	483.2738494475573	964.5331459619147	2	483.2741394042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YIKNKKGD_	REV__ENSG00000136504|ENST00000259021|KAT7;REV__ENST00000444292.2_1_X:95228575-95229244:-|nuORF;REV__ENST00000512616.5_1_17:47892935-47904861:+|nuORF;REV__ENST00000513980.5_1_17:47892935-47904861:+|nuORF;REV__KAT7|p.V504Lfs*14|1|0.35|ENSG00000136504|chr17:49826024-49826024|A/-|frameshift_variant;REV__nc|ENSG00000136504|O95251-2|KAT7;REV__nc|ENSG00000136504|O95251-3|KAT7;REV__nc|ENSG00000136504|O95251-4|KAT7;REV__nc|ENSG00000136504|O95251-5|KAT7	57.81127852772723	0.5234495074909924	2				NaN	NaN	0	NaN	4021	2927	6945
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6951	21.731	NaN	2135.3	30	0	335.38	0.106			+	37451	SLIKLHASK	9	59	498.8129461055551	995.6113392779102	2	498.813232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLIKLHASK_	REV__ENST00000341060.3_1_6:24658840-24658948:-|nuORF	42.86426827375447	0.38666266728046506	2				NaN	NaN	0	NaN	4022	2927	6945
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6952	21.732	NaN	3007.3	30	0	762.28	0.038			+	9976	ERGNKIRESI	10	49	401.2260045601515	1200.6561842806545	3	401.226318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ERGNKIRESI_	REV__ENST00000263253.8_1_22:41488962-41489055:+|nuORF	35.17822180527639	0.5925517082438457	2				NaN	NaN	0	NaN	4023	2927	6945
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6965	21.76	NaN	36846	30	0	7080.9	0.214			+	34194	RTDCVAGQV	9	89	474.7312208766297	947.4478888200595	2	474.7316589355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTDCVAGQV_	REV__RBM48|p.R18G|1|0.21|ENSG00000127993|chr7:92528865-92528865|A/G|missense_variant	118.74307786436346	0.02196067127630568	2				NaN	NaN	0	NaN	4033	2930	6964
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6966	21.763	NaN	5994.2	30	0	1021.2	0.106	+			22473	KTMPTTFNR	9	69	548.2839992814729	1094.5534456297457	2	548.284912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTMPTTFNR_	ENSG00000138381|ENST00000260952|ASNSD1	120.8684288430529	0.02067403653475984	2				NaN	NaN	0	NaN	4034	2930	6964
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6967	21.765	NaN	11899	30	0	1300.7	0.106	+			49233	VVNKVPLTGK	10	83	527.8338868932135	1053.653220853227	2	527.8350219726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVNKVPLTGK_	ENSG00000151135|ENST00000280756|TMEM263	89.02883481214508	0.13663399911061233	2				NaN	NaN	0	NaN	4035	2930	6964
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6968	21.767	NaN	11219	30	0	1003.7	0.106			+	-1	EENMQFGKFTM	11	81	689.2944304321894	1376.5743079311787	2	689.2926635742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_EENMQFGKFTM(Oxidation (M))_	REV__nc|ENSG00000232872|Q8IX95|CTAGE3P	37.81151784470057	0.5878881669006212	2				NaN	NaN	0	NaN	4036	2930	6964
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6969	21.769	NaN	4836	30	0	722.85	0.106			+	20554	KFQKKGLE	8	64	489.2918836678177	976.5692144024354	2	489.2924499511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KFQKKGLE_	REV__ENSG00000166508|ENST00000303887|MCM7;REV__ENST00000463722.5_1_7:99697202-99698956:-|nuORF;REV__MCM7|p.Q123Rfs*26|1|0.47|ENSG00000166508|chr7:100099313-100099313|G/-|frameshift_variant;REV__MCM7|p.S549Pfs*8|1|0.36|ENSG00000166508|chr7:100095422-100095422|G/-|frameshift_variant;REV__nc|ENSG00000166508|P33993-2|MCM7	65.80317337860623	0.44433089765398776	2				NaN	NaN	0	NaN	4037	2930	6964
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6970	21.771	NaN	50870	30	0	10363	0.038			+	-1	KRRGTSATGAM	11	107	384.5360020186541	1150.5861766561623	3	384.53619384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_KRRGTSATGAM(Oxidation (M))_	REV__ENSG00000132793|ENST00000373257|LPIN3;REV__LPIN3|p.G368Afs*52|1|0.31|ENSG00000132793|chr20:41350389-41350389|G/-|frameshift_variant;REV__LPIN3|p.K715Rfs*19|1|0.47|ENSG00000132793|chr20:41357981-41357981|C/-|frameshift_variant;REV__nc|ENSG00000132793|Q9BQK8-2|LPIN3	60.1669710687717	0.32196467475348695	2				NaN	NaN	0	NaN	4038	2930	6964
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6971	21.771	NaN	4681.6	30	0	657.95	0.136	+			25736	LRVGGGGV	8	56	357.71619588532155	713.4178388374431	2	357.7162780761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LRVGGGGV_	ENST00000536878.6_2_19:58095623-58095668:+|nuORF	29.841539824830324	0.7289191502596711	2				NaN	NaN	0	NaN	4039	2930	6964
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6985	21.803	NaN	35174	30	0	15780	0.214	+			2579	AQFGGKILRK	10	68	373.2325542486192	1116.6758333460575	3	373.23297119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AQFGGKILRK_	ENSG00000070047|ENST00000264555|PHRF1;nc|ENSG00000070047|Q9P1Y6-2|PHRF1;nc|ENSG00000070047|Q9P1Y6-3|PHRF1;PHRF1|p.E1225Kfs*62|1|0.36|ENSG00000070047|chr11:609125-609125|G/-|frameshift_variant;PHRF1|p.L1393Cfs*8|1|0.38|ENSG00000070047|chr11:609628-609628|C/-|frameshift_variant;PHRF1|p.P938Qfs*23|2|0.45|ENSG00000070047|chr11:608263-608263|C/-|frameshift_variant;PHRF1|p.T1126Pfs*73|1|0.36|ENSG00000070047|chr11:608827-608827|C/-|frameshift_variant	32.81241826257853	0.6118718159329168	2				NaN	NaN	0	NaN	4050	2933	6984
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6986	21.806	NaN	11948	30	0	3261.8	0.106	+			5361	ATWATKELRK	10	74	401.89920481101	1202.67578503323	3	401.8996276855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATWATKELRK_	ENSG00000108424|ENST00000290158|KPNB1;nc|ENSG00000108424|Q14974-2|KPNB1	61.691277971877994	0.35045824941635534	2				NaN	NaN	0	NaN	4051	2933	6984
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6987	21.808	NaN	11160	30	0	3012.3	0.106	+			32985	REELGRLA	8	76	472.2694399235179	942.5243269138358	2	472.2694091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_REELGRLA_	ENSG00000163661|ENST00000295927|PTX3	66.42927471994793	0.4381325844043345	2				NaN	NaN	0	NaN	4052	2933	6984
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6988	21.81	NaN	4155.9	30	0	791.79	0.106	+			22625	KTVDGALVAAK	11	61	536.8210821104818	1071.6276112877636	2	536.8220825195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTVDGALVAAK_	ENST00000461436.1_1_3:152017982-152019737:+|nuORF	89.56079334093651	0.10057263200875313	2				NaN	NaN	0	NaN	4053	2933	6984
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6989	21.812	NaN	2934.3	30	0	389.23	0.106	+			23106	KVVKVTIMK	9	63	523.3431028187293	1044.6716527042586	2	523.34423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KVVKVTIMK_	ENSG00000139168|ENST00000266529|ZCRB1;ZCRB1|p.K141Efs*4|1|0.29|ENSG00000139168|chr12:42313900-42313901|-/T|frameshift_variant;ZCRB1|p.W185Mfs*13|2|0.39|ENSG00000139168|chr12:42313168-42313169|-/T|frameshift_variant	72.2432373244024	0.13108886737667413	2				NaN	NaN	0	NaN	4054	2933	6984
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6990	21.814	NaN	8608.6	30	0	2369.5	0.034	+			48664	VTSSVSTLK	9	62	461.265640451385	920.5167279695701	2	461.26605224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTSSVSTLK_	ENSG00000186260|ENST00000571589|MRTFB;nc|ENSG00000186260|Q9ULH7-4|MRTFB;nc|ENSG00000186260|Q9ULH7|MRTFB	112.41091882917199	0.026537921851008135	2				NaN	NaN	0	NaN	4055	2933	6984
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6991	21.814	NaN	13645	30	0	1646.9	0.139				-1	 	0	81	444.7136165276267	887.4126801220534	2	444.714111328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4056	2933	6984
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7006	21.848	NaN	28768	30	0	11474	0.215				-1	 	0	54	325.53767102868505	973.5911836862551	3	325.5378723144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4068	2936	7005
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7007	21.851	NaN	9202.4	30	0	1443.4	0.106	+			24146	LELGWHKLL	9	70	370.22059550232746	NaN	0	370.2204895019531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LELGWHKLL_	ENSG00000160460|ENST00000598249|SPTBN4;nc|ENSG00000160460|Q9H254-2|SPTBN4;nc|ENSG00000160460|Q9H254-4|SPTBN4	47.657333605630114	0.2228375344433429	2				NaN	NaN	0	NaN	4069	2936	7005
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7008	21.853	NaN	11816	30	0	2652.6	0.106			+	-1	KLYQCVVKI	9	69	384.22724999492004	1149.6599205849602	3	384.2276306152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_KLYQC(Carbamidomethyl (C))VVKI_	REV__ENSG00000137509|ENST00000313010|PRCP;REV__nc|ENSG00000137509|P42785-2|PRCP	49.44154591367651	0.3095138337212152	2				NaN	NaN	0	NaN	4070	2936	7005
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7009	21.855	NaN	2466.8	30	0	344.23	0.106			+	22039	KSIKAKSLH	9	60	506.3185554451512	1010.6225579571025	2	506.3186950683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KSIKAKSLH_	REV__ENSG00000123131|ENST00000379341|PRDX4	31.529811441608018	0.5085848003137583	2				NaN	NaN	0	NaN	4071	2936	7005
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7010	21.857	NaN	32848	30	0	3985.7	0.106				-1	 	0	74	517.2868230123639	1032.5590930915278	2	517.2872314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4072	2936	7005
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7011	21.859	NaN	3654.6	30	0	230.93	0.037	+			33015	REHIKVQQL	9	66	575.8372407361776	1149.659928539155	2	575.837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_REHIKVQQL_	EIF4G1|p.P1229Qfs*2|1|0.18|ENSG00000114867|chr3:184327606-184327606|C/-|frameshift_variant;ENSG00000114867|ENST00000346169|EIF4G1;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1	99.01295224348159	0.040209060045561164	2				NaN	NaN	0	NaN	4073	2936	7005
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7012	21.859	NaN	3836.9	30	0	664.31	0.14	+			20120	KEKLEAEM	8	63	489.25173367863636	976.4889144240727	2	489.2520751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KEKLEAEM_	ENSG00000121390|ENST00000338910|PSPC1;ENSG00000136824|ENST00000374793|SMC2;ENST00000442352.1_1_13:19782657-19801502:-|nuORF;nc|ENSG00000121390|Q8WXF1-2|PSPC1;nc|ENSG00000136824|O95347-2|SMC2;SMC2|p.T751Pfs*9|3|0.3|ENSG00000136824|chr9:104123220-104123220|A/-|frameshift_variant	101.60071028292904	0.24979566554663588	2				NaN	NaN	0	NaN	4074	2936	7005
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7026	21.891	NaN	36975	30	0	6688.6	0.214				-1	 	0	91	416.23160407399484	830.4486552147897	2	416.23199462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4085	2939	7025
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7027	21.895	NaN	86791	30	0	9803.4	0.106				-1	 	0	79	565.9146388396575	1694.7220871191726	3	565.915771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4086	2939	7025
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7028	21.897	NaN	31222	30	0	11496	0.106	+			50079	WGEIIKLPI	9	92	356.8883434027911	NaN	0	357.18896484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_WGEIIKLPI_	DOCK3|p.P1852Qfs*45|14|0.4|ENSG00000088538|chr3:51380173-51380173|C/-|frameshift_variant;DOCK3|p.P1852Sfs*46|1|0.25|ENSG00000088538|chr3:51380173-51380174|CC/-|frameshift_variant;ENSG00000088538|ENST00000266037|DOCK3	57.81127852772723	0.15865383123342353	2				NaN	NaN	0	NaN	4087	2939	7025
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7029	21.898	NaN	9822.1	30	0	1175.9	0.106	+			41934	SVVQSGQLK	9	72	473.2715982015407	944.5286434698814	2	473.271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVVQSGQLK_	ENGASE|p.S611Gfs*22|1|0.26|ENSG00000167280|chr17:79085943-79085950|CTGCCAGC/-|frameshift_variant;ENGASE|p.T547Hfs*45|1|0.16|ENSG00000167280|chr17:79085274-79085275|-/C|frameshift_variant;ENGASE|p.T547Pfs*14|2|0.35|ENSG00000167280|chr17:79085275-79085275|C/-|frameshift_variant;ENSG00000167280|ENST00000579016|ENGASE;nc|ENSG00000167280|Q8NFI3-2|ENGASE;nc|ENSG00000167280|Q8NFI3-3|ENGASE	66.96192283764107	0.15557981141143568	2				NaN	NaN	0	NaN	4088	2939	7025
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7030	21.9	NaN	69115	30	0	45663	0.106	+			21186	KLASSIAFTYN	11	77	405.55200297576044	1213.6341795274814	3	405.5523681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KLASSIAFTYN_	ENSG00000172915|ENST00000379939|NBEA;ENST00000497540.1_1_13:35644101-35644990:+|nuORF;NBEA|p.N1121Kfs*2|1|0.35|ENSG00000172915|chr13:35159525-35159526|-/A|frameshift_variant;NBEA|p.N1121Mfs*9|2|0.36|ENSG00000172915|chr13:35159526-35159526|A/-|frameshift_variant;NBEA|p.N718Kfs*4|1|0.12|ENSG00000172915|chr13:35118380-35118381|-/A|frameshift_variant;NBEA|p.N854Kfs*18|1|0.22|ENSG00000172915|chr13:35156110-35156111|-/A|frameshift_variant;NBEA|p.V2250Lfs*10|1|0.36|ENSG00000172915|chr13:35550967-35550967|A/-|frameshift_variant;nc|ENSG00000172915|Q8NFP9|NBEA	43.650786325866115	0.5079891456189096	2				NaN	NaN	0	NaN	4089	2939	7025
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7031	21.902	NaN	10809	30	0	2483.4	0.033	+			39018	SSSGTVLSK	9	64	433.2343853590349	864.4542177848698	2	433.2346496582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSSGTVLSK_	ENSG00000145362|ENST00000357077|ANK2	93.1432384553994	0.056003526918089595	2				NaN	NaN	0	NaN	4090	2939	7025
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7032	21.903	NaN	6574.9	30	0	751.91	0.142	+			757	AEEKHLHVL	9	65	359.20108021221415	1074.5814112368425	3	359.2012939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AEEKHLHVL_	ENSG00000072042|ENST00000381346|RDH11;ENST00000553816.5_1_14:68151682-68162420:-|nuORF;nc|ENSG00000072042|Q8TC12-2|RDH11;nc|ENSG00000072042|Q8TC12-3|RDH11	68.78682469695295	0.14603441672067394	2				NaN	NaN	0	NaN	4091	2939	7025
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7050	21.942	NaN	828080	30	0	110950	0.052	+			6198	AVQRTLLEK	9	99	529.3208276293964	1056.6271023255927	2	529.3223876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVQRTLLEK_	ENSG00000002586|ENST00000381192|CD99;ENST00000381177.6_1_X:2656215-2658842:+|nuORF;nc|ENSG00000292348|P14209-3|CD99	136.98908636845044	0.011892605960677736	2				NaN	NaN	0	NaN	4106	2942	7049
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7051	21.943	NaN	1266800	30	0	457110	0.05	+			6199	AVQRTLLEK	9	87	353.21660780550474	1056.6279940167142	3	353.21728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVQRTLLEK_	ENSG00000002586|ENST00000381192|CD99;ENST00000381177.6_1_X:2656215-2658842:+|nuORF;nc|ENSG00000292348|P14209-3|CD99	85.86182877749512	0.07653218437724067	2				NaN	NaN	0	NaN	4107	2942	7049
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7052	21.944	NaN	451310	30	0	96844	0.068	+			15224	GTSSVIVSR	9	87	453.25557546981895	904.4965980064379	2	453.2558288574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTSSVIVSR_	ENSG00000072803|ENST00000517395|FBXW11;nc|ENSG00000072803|Q9UKB1-2|FBXW11;nc|ENSG00000072803|Q9UKB1-3|FBXW11;nc|ENSG00000072803|Q9UKB1|FBXW11	176.44474024533739	0.0016668318535579616	2				NaN	NaN	0	NaN	4108	2942	7049
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7053	21.945	NaN	289340	30	0	122330	0.106			+	33524	RKTLIEGA	8	126	444.2685856597601	886.5226183863202	2	444.268798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RKTLIEGA_	REV__ABCB1|p.N809Tfs*6|1|0.33|ENSG00000085563|chr7:87536513-87536513|T/-|frameshift_variant;REV__ABCB1|p.P1016Lfs*2|1|0.23|ENSG00000085563|chr7:87516546-87516546|G/-|frameshift_variant;REV__ENSG00000085563|ENST00000622132|ABCB1;REV__nc|ENSG00000085563|P08183-2|ABCB1	143.01937276914788	0.26921844304278314	2				NaN	NaN	0	NaN	4109	2942	7049
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7054	21.947	NaN	22837	30	0	3333.3	0.106	+			22981	KVRTLIEQ	8	86	493.8025172452469	985.5904815572939	2	493.8031921386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KVRTLIEQ_	ENSG00000136152|ENST00000349995|COG3;nc|ENSG00000136152|Q96JB2-2|COG3	172.24860141594272	0.12535391951155392	2				NaN	NaN	0	NaN	4110	2942	7049
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7055	21.949	NaN	12464	30	0	2595.5	0.106				-1	 	0	64	379.7236075251033	757.4326621170067	2	379.7239685058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4111	2942	7049
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7056	21.951	NaN	5516.1	30	0	1357.4	0.106				-1	 	0	47	335.2052604698796	668.3959680065592	2	335.2055969238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4112	2942	7049
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7057	21.952	NaN	9023.9	30	0	1917.9	0.106			+	40530	SVAAAAVEAK	10	65	458.7583312988281	NaN	0	458.7583312988281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_SVAAAAVEAK_	REV__TRIM55|p.A489V|1|0.4|ENSG00000147573|chr8:66154276-66154276|C/T|missense_variant	62.107414245175825	0.217068727747531	2				NaN	NaN	0	NaN	4113	2942	7049
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7058	21.954	NaN	15999	30	0	2963.5	0.034			+	26531	LTQQLEPK	8	70	478.7734816475588	NaN	0	478.7736511230469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	9	Unmodified	_LTQQLEPK_	REV__ENST00000273261.7_1_3:66512909-66550892:-|nuORF	79.71258880314673	1.7418937515398478	2				NaN	NaN	0	NaN	4114	2942	7049
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7072	21.983	NaN	31762	30	0	3583.6	0.143			+	48659	VTSSKRLLQ	9	83	516.3136337564354	1030.6127145796706	2	516.8154907226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTSSKRLLQ_	REV__ENSG00000176771|ENST00000409261|NCKAP5	74.1650062923329	0.12277912660386392	2				NaN	NaN	0	NaN	4125	2945	7071
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7084	22.011	NaN	22798	30	0	5791.2	0.214				-1	KMIAMGSAAAL	11	69	365.8560844488959	1094.5464239468877	3	365.85638427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_KM(Oxidation (M))IAM(Oxidation (M))GSAAAL_	APC|p.A1296Qfs*9|1|0.88|ENSG00000134982|chr5:112839478-112839478|A/-|frameshift_variant;APC|p.A1305Sfs*10|1|0.24|ENSG00000134982|chr5:112839504-112839505|-/T|frameshift_variant;APC|p.A1351Gfs*3|1|0.81|ENSG00000134982|chr5:112839644-112839645|-/G|frameshift_variant;APC|p.A1446Vfs*27|1|0.38|ENSG00000134982|chr5:112839931-112839931|C/-|frameshift_variant;APC|p.A1492Cfs*22|2|0.29|ENSG00000134982|chr5:112840063-112840064|-/T|frameshift_variant;APC|p.A1492Pfs*15|1|0.69|ENSG00000134982|chr5:112840068-112840068|G/-|frameshift_variant;APC|p.A759Sfs*16|1|0.2|ENSG00000134982|chr5:112837863-112837864|-/A|frameshift_variant;APC|p.C1249Sfs*16|1|0.59|ENSG00000134982|chr5:112839340-112839340|G/-|frameshift_variant;APC|p.C1387*|1|0.31|ENSG00000134982|chr5:112839749-112839750|-/AGAT|frameshift_variant;APC|p.C1578Mfs*13|1|0.68|ENSG00000134982|chr5:112840323-112840324|-/A|frameshift_variant;APC|p.D1486Ifs*21|2|0.76|ENSG00000134982|chr5:112840049-112840049|T/-|frameshift_variant;APC|p.D777*|1|0.37|ENSG00000134982|chr5:112837920-112837921|-/TC|frameshift_variant;APC|p.D777Kfs*8|1|0.3|ENSG00000134982|chr5:112837921-112837928|TAGACAAT/-|frameshift_variant;APC|p.D849Ifs*12|3|0.47|ENSG00000134982|chr5:112838134-112838134|A/-|frameshift_variant;APC|p.D849Rfs*2|1|0.3|ENSG00000134982|chr5:112838133-112838134|-/A|frameshift_variant;APC|p.D849Vfs*12|1|0.61|ENSG00000134982|chr5:112838140-112838140|A/-|frameshift_variant;APC|p.D903Sfs*2|1|0.4|ENSG00000134982|chr5:112838300-112838301|-/TCCT|frameshift_variant;APC|p.E1322Rfs*10|1|0.15|ENSG00000134982|chr5:112839556-112839557|-/C|frameshift_variant;APC|p.E1353Nfs*62|1|0.5|ENSG00000134982|chr5:112839649-112839649|T/-|frameshift_variant;APC|p.E1397Gfs*18|1|0.76|ENSG00000134982|chr5:112839784-112839784|A/-|frameshift_variant;APC|p.E1464Vfs*8|2|0.27|ENSG00000134982|chr5:112839979-112839982|AGAG/-|frameshift_variant;APC|p.E1494Kfs*13|1|0.84|ENSG00000134982|chr5:112840073-112840073|G/-|frameshift_variant;APC|p.E1544Nfs*21|1|0.05|ENSG00000134982|chr5:112840220-112840220|T/-|frameshift_variant;APC|p.E1552Qfs*12|1|0.31|ENSG00000134982|chr5:112840247-112840250|AGAG/-|frameshift_variant;APC|p.E1576Kfs*74|1|0.61|ENSG00000134982|chr5:112840319-112840319|A/-|frameshift_variant;APC|p.F1491Lfs*16|1|0.27|ENSG00000134982|chr5:112840064-112840064|T/-|frameshift_variant;APC|p.F801Lfs*19|1|0.31|ENSG00000134982|chr5:112837993-112837993|T/-|frameshift_variant;APC|p.G1288*|1|0.58|ENSG00000134982|chr5:112839452-112839453|-/AT|frameshift_variant;APC|p.H1490Nfs*25|1|0.21|ENSG00000134982|chr5:112840059-112840060|-/TAAA|frameshift_variant;APC|p.H1490Tfs*24|1|0.23|ENSG00000134982|chr5:112840060-112840061|-/A|frameshift_variant;APC|p.H1490Yfs*18|1|0.48|ENSG00000134982|chr5:112840059-112840060|-/TA|frameshift_variant;APC|p.H785Qfs*6|1|0.49|ENSG00000134982|chr5:112837933-112837934|-/TCCCAAGGCA|frameshift_variant;APC|p.H913Ifs*3|1|0.31|ENSG00000134982|chr5:112838331-112838331|C/-|frameshift_variant;APC|p.H913Qfs*39|1|0.23|ENSG00000134982|chr5:112838330-112838339|ACATTGTGTG/-|frameshift_variant;APC|p.I1304Mfs*4|1|0.28|ENSG00000134982|chr5:112839506-112839506|A/-|frameshift_variant;APC|p.I1307Rfs*6|1|0.12|ENSG00000134982|chr5:112839511-112839515|AAATA/-|frameshift_variant;APC|p.I1311Lfs*10|1|0.45|ENSG00000134982|chr5:112839524-112839524|G/-|frameshift_variant;APC|p.I1311Rfs*3|1|0.46|ENSG00000134982|chr5:112839526-112839527|TT/-|frameshift_variant;APC|p.I1401Mfs*14|1|0.73|ENSG00000134982|chr5:112839796-112839796|T/-|frameshift_variant;APC|p.I1417Hfs*6|1|0.53|ENSG00000134982|chr5:112839839-112839840|-/G|frameshift_variant;APC|p.I1557*|1|0.43|ENSG00000134982|chr5:112840262-112840263|TA/-|frameshift_variant;APC|p.I1574Yfs*2|1|0.36|ENSG00000134982|chr5:112840312-112840312|A/-|frameshift_variant;APC|p.I1580Lfs*69|1|0.59|ENSG00000134982|chr5:112840330-112840333|TTAT/-|frameshift_variant;APC|p.I1580Nfs*11|1|0.36|ENSG00000134982|chr5:112840331-112840332|-/A|frameshift_variant;APC|p.K1053Nfs*3|1|0.39|ENSG00000134982|chr5:112838751-112838751|A/-|frameshift_variant;APC|p.K1454Lfs*20|1|0.81|ENSG00000134982|chr5:112839952-112839953|-/TT|frameshift_variant;APC|p.K993*|1|0.18|ENSG00000134982|chr5:112838569-112838570|-/T|frameshift_variant;APC|p.L1302Cfs*3|1|0.77|ENSG00000134982|chr5:112839496-112839496|C/-|frameshift_variant;APC|p.L1337Pfs*4|1|0.82|ENSG00000134982|chr5:112839604-112839605|TG/-|frameshift_variant;APC|p.L1488Ffs*17|1|0.27|ENSG00000134982|chr5:112840057-112840063|TATTACA/-|frameshift_variant;APC|p.L1488Yfs*19|2|0.41|ENSG00000134982|chr5:112840055-112840055|T/-|frameshift_variant;APC|p.L1489Kfs*19|1|0.34|ENSG00000134982|chr5:112840058-112840074|ATTACATTTTGCCACGG/-|frameshift_variant;APC|p.L1489Yfs*18|3|0.26|ENSG00000134982|chr5:112840059-112840059|T/-|frameshift_variant;APC|p.L964*|1|0.44|ENSG00000134982|chr5:112838483-112838483|T/-|frameshift_variant;APC|p.M1383Ifs*3|1|0.64|ENSG00000134982|chr5:112839741-112839742|-/T|frameshift_variant;APC|p.M1431Cfs*42|1|0.4|ENSG00000134982|chr5:112839883-112839883|C/-|frameshift_variant;APC|p.M743Cfs*18|1|0.29|ENSG00000134982|chr5:112837819-112837819|T/-|frameshift_variant;APC|p.N1455Ifs*18|1|0.15|ENSG00000134982|chr5:112839954-112839954|A/-|frameshift_variant;APC|p.N1531Rfs*31|1|0.18|ENSG00000134982|chr5:112840186-112840195|ATGACAATGG/-|frameshift_variant;APC|p.N1535Mfs*30|1|0.28|ENSG00000134982|chr5:112840194-112840194|G/-|frameshift_variant;APC|p.N961Kfs*5|1|0.45|ENSG00000134982|chr5:112838473-112838474|-/AA|frameshift_variant;APC|p.P1319Lfs*2|2|0.32|ENSG00000134982|chr5:112839549-112839549|C/-|frameshift_variant;APC|p.P1319Lfs*3|1|0.27|ENSG00000134982|chr5:112839547-112839548|-/TC|frameshift_variant;APC|p.P1330Qfs*11|1|0.22|ENSG00000134982|chr5:112839583-112839584|CT/-|frameshift_variant;APC|p.P1439Lfs*34|4|0.34|ENSG00000134982|chr5:112839909-112839909|C/-|frameshift_variant;APC|p.P1442Lfs*31|1|0.41|ENSG00000134982|chr5:112839918-112839918|C/-|frameshift_variant;APC|p.P1453Lfs*20|2|0.29|ENSG00000134982|chr5:112839951-112839951|C/-|frameshift_variant;APC|p.P832Tfs*12|1|0.16|ENSG00000134982|chr5:112838086-112838087|-/A|frameshift_variant;APC|p.Q1067Hfs*64|1|0.06|ENSG00000134982|chr5:112838794-112838795|-/TAATTTATTGGTGT|frameshift_variant;APC|p.Q1067Lfs*14|1|0.06|ENSG00000134982|chr5:112838793-112838794|-/T|frameshift_variant;APC|p.Q1429Dfs*45|1|0.42|ENSG00000134982|chr5:112839875-112839876|-/GG|frameshift_variant;APC|p.Q1447Sfs*24|1|0.77|ENSG00000134982|chr5:112839931-112839937|CTCAAAC/-|frameshift_variant;APC|p.R1435Efs*38|1|0.41|ENSG00000134982|chr5:112839897-112839897|A/-|frameshift_variant;APC|p.R1435Lfs*31|1|0.38|ENSG00000134982|chr5:112839896-112839917|CAGAAGTAAAACACCTCCACCA/-|frameshift_variant;APC|p.R854Vfs*10|1|0.3|ENSG00000134982|chr5:112838140-112838141|-/TAGAAGTT|frameshift_variant;APC|p.S1163Tfs*2|1|0.41|ENSG00000134982|chr5:112839082-112839082|G/-|frameshift_variant;APC|p.S1190Yfs*75|1|0.47|ENSG00000134982|chr5:112839163-112839163|C/-|frameshift_variant;APC|p.S1205Tfs*60|1|0.36|ENSG00000134982|chr5:112839208-112839208|G/-|frameshift_variant;APC|p.S1272Ffs*4|1|0.15|ENSG00000134982|chr5:112839403-112839404|-/T|frameshift_variant;APC|p.S1355Ffs*62|1|0.37|ENSG00000134982|chr5:112839653-112839654|-/TTTTT|frameshift_variant;APC|p.S1355Lfs*60|2|0.6|ENSG00000134982|chr5:112839654-112839654|T/-|frameshift_variant;APC|p.S1398Ifs*17|1|0.86|ENSG00000134982|chr5:112839787-112839787|G/-|frameshift_variant;APC|p.S1400*|1|0.45|ENSG00000134982|chr5:112839793-112839793|C/-|frameshift_variant;APC|p.S1403Mfs*13|1|0.05|ENSG00000134982|chr5:112839799-112839818|CCAGCTCCGTTCAGAGTGAA/-|frameshift_variant;APC|p.S1407Vfs*8|1|0.39|ENSG00000134982|chr5:112839812-112839812|G/-|frameshift_variant;APC|p.S1411Rfs*4|1|0.42|ENSG00000134982|chr5:112839827-112839827|T/-|frameshift_variant;APC|p.S1419*|1|0.33|ENSG00000134982|chr5:112839844-112839845|-/TA|frameshift_variant;APC|p.S1421Mfs*52|1|0.67|ENSG00000134982|chr5:112839856-112839856|G/-|frameshift_variant;APC|p.S1421Vfs*52|1|0.51|ENSG00000134982|chr5:112839855-112839855|A/-|frameshift_variant;APC|p.S1436Rfs*38|1|0.42|ENSG00000134982|chr5:112839899-112839900|-/AG|frameshift_variant;APC|p.S1436Vfs*37|1|0.37|ENSG00000134982|chr5:112839899-112839899|A/-|frameshift_variant;APC|p.S1465Rfs*9|3|0.3|ENSG00000134982|chr5:112839978-112839979|-/AG|frameshift_variant;APC|p.S1501Ffs*13|1|0.5|ENSG00000134982|chr5:112840091-112840092|-/T|frameshift_variant;APC|p.S1581Lfs*69|1|0.34|ENSG00000134982|chr5:112840333-112840333|T/-|frameshift_variant;APC|p.S943Qfs*12|2|0.28|ENSG00000134982|chr5:112838420-112838420|T/-|frameshift_variant;APC|p.T1313Nfs*2|1|0.51|ENSG00000134982|chr5:112839529-112839530|-/A|frameshift_variant;APC|p.T1487Yfs*18|1|0.1|ENSG00000134982|chr5:112840051-112840057|ATACTTT/-|frameshift_variant;APC|p.T1493Rfs*14|2|0.34|ENSG00000134982|chr5:112840069-112840069|C/-|frameshift_variant;APC|p.T1496Kfs*19|1|0.17|ENSG00000134982|chr5:112840075-112840076|-/AAGT|frameshift_variant;APC|p.T1556Lfs*9|1|0.61|ENSG00000134982|chr5:112840255-112840255|A/-|frameshift_variant;APC|p.T1556Nfs*3|11|0.46|ENSG00000134982|chr5:112840254-112840255|-/A|frameshift_variant;APC|p.T899Ifs*12|1|0.4|ENSG00000134982|chr5:112838290-112838291|CC/-|frameshift_variant;APC|p.V1390Ffs*6|1|0.39|ENSG00000134982|chr5:112839757-112839758|-/TTCT|frameshift_variant;APC|p.V1414*|4|0.37|ENSG00000134982|chr5:112839833-112839833|G/-|frameshift_variant;APC|p.V1414Efs*5|1|0.58|ENSG00000134982|chr5:112839835-112839835|T/-|frameshift_variant;APC2|p.P1892Rfs*104|1|0.27|ENSG00000115266|chr19:1468971-1468971|C/-|frameshift_variant;ENSG00000115266|ENST00000590469|APC2;ENSG00000134982|ENST00000257430|APC;nc|ENSG00000115266|O95996-2|APC2;nc|ENSG00000115266|O95996-3|APC2;nc|ENSG00000134982|P25054-2|APC;nc|ENSG00000134982|P25054-3|APC	32.75053402867276	0.6462648045997152	2				NaN	NaN	0	NaN	4134	2948	7083
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7085	22.014	NaN	12333	30	0	1778.9	0.106	+			16427	HESDVKIVA	9	71	499.26895799883977	996.5233630644796	2	499.2694396972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HESDVKIVA_	ENSG00000165238|ENST00000427277|WNK2;nc|ENSG00000165238|Q9Y3S1-2|WNK2;nc|ENSG00000165238|Q9Y3S1-3|WNK2;nc|ENSG00000165238|Q9Y3S1-4|WNK2;nc|ENSG00000165238|Q9Y3S1|WNK2;WNK2|p.S1424Pfs*5|1|0.34|ENSG00000165238|chr9:93288908-93288908|C/-|frameshift_variant;WNK2|p.T1980Lfs*12|2|0.16|ENSG00000165238|chr9:93297965-93297965|C/-|frameshift_variant	98.58198989935565	0.04066992115528678	2				NaN	NaN	0	NaN	4135	2948	7083
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7086	22.016	NaN	8198.9	30	0	1829.3	0.106			+	26586	LTVDARPC	8	69	437.72567477097266	873.4367966087453	2	437.7261657714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LTVDARPC_	REV__ENSG00000130182|ENST00000576985|ZSCAN10;REV__nc|ENSG00000130182|Q96SZ4|ZSCAN10	47.91560031466742	0.6071945918984287	2				NaN	NaN	0	NaN	4136	2948	7083
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7087	22.018	NaN	9158.5	30	0	1581.8	0.106	+			38346	SRLNLLTP	8	71	457.2764300053483	912.5383070774966	2	457.2769775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SRLNLLTP_	DICER1|p.K1486Nfs*4|1|0.23|ENSG00000100697|chr14:95096462-95096462|T/-|frameshift_variant;DICER1|p.S1473Ffs*4|1|0.2|ENSG00000100697|chr14:95096502-95096503|-/A|frameshift_variant;ENSG00000100697|ENST00000343455|DICER1;ENST00000556045.5_1_14:95570385-95572406:-|nuORF;nc|ENSG00000100697|Q9UPY3-2|DICER1	56.72105179125745	0.5342425954139568	2				NaN	NaN	0	NaN	4137	2948	7083
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7088	22.02	NaN	12749	30	0	5459.1	0.106	+			39258	STANIDDLKK	10	80	368.8675734346148	1103.5808909040445	3	368.8681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STANIDDLKK_	ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5	42.86426827375447	0.522752283233888	2				NaN	NaN	0	NaN	4138	2948	7083
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7089	22.022	NaN	2941.1	30	0	524.24	0.033			+	47979	VSPGRPEK	8	57	435.24514839778277	868.4757438623656	2	435.2455139160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VSPGRPEK_	REV__ADAMTS15|p.D814E|1|0.36|ENSG00000166106|chr11:130473410-130473410|C/A|missense_variant	27.882242232435846	0.7440473649773525	2				NaN	NaN	0	NaN	4139	2948	7083
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7090	22.022	NaN	4825	30	0	322.19	0.143			+	45871	VANDFIQVYK	10	69	399.5485310586837	1195.623763776251	3	399.5492248535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VANDFIQVYK_	REV__tr|U7T5I8|U7T5I8_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00072PE=4SV=1	40.05817265558897	0.5486090488315611	2				NaN	NaN	0	NaN	4140	2948	7083
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7105	22.056	NaN	122020	30	0	14614	0.169			+	-1	SLVRCIAK	8	95	473.7780146562104	945.5414763792209	2	473.7781982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SLVRC(Carbamidomethyl (C))IAK_	REV__ENSG00000149218|ENST00000278505|ENDOD1	52.936696900407355	0.5717071646657654	2				NaN	NaN	0	NaN	4152	2951	7104
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7106	22.058	NaN	62242	30	0	26617	0.106			+	-1	SAKMIELMVL	10	72	389.5432071940698	1165.6077921824094	3	389.5436096191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Oxidation (M)	_SAKM(Oxidation (M))IELM(Oxidation (M))VL_	REV__ENST00000518390.5_1_8:87492545-87498726:-|nuORF	35.15202426646627	0.5927656479315102	2				NaN	NaN	0	NaN	4153	2951	7104
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7107	22.06	NaN	25316	30	0	2448.9	0.106			+	16173	HEAKKVEQE	9	91	549.2822501410797	1096.5499473489592	2	549.2832641601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HEAKKVEQE_	REV__ENSG00000133422|ENST00000397641|MORC2;REV__ENST00000469915.1_1_22:31332963-31338135:-|nuORF;REV__nc|ENSG00000133422|Q9Y6X9-2|MORC2	134.81075121484326	0.012914550297035062	2				NaN	NaN	0	NaN	4154	2951	7104
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7108	22.062	NaN	30300	30	0	5960	0.106	+			19922	KEFEGKTL	8	87	476.26051063010436	950.5064683270087	2	476.2606201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEFEGKTL_	ENSG00000080824|ENST00000216281|HSP90AA1;ENST00000378770.1_1_4:190394307-190396341:+|nuORF;ENST00000530115.1_1_11:27910903-27911533:-|nuORF;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000205100|Q58FG1|HSP90AA4P	107.00750918261382	0.24681273948614665	2				NaN	NaN	0	NaN	4155	2951	7104
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7109	22.064	NaN	42565	30	0	5166.3	0.106				-1	 	0	95	465.76584662235393	929.5171403115079	2	465.76611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4156	2951	7104
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7110	22.066	NaN	4835	30	0	434.33	0.106	+			3647	ASYGRDAFAK	10	72	543.2715530807421	1084.5285532282842	2	543.272705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASYGRDAFAK_	ENSG00000176658|ENST00000318217|MYO1D	83.6470233535746	0.16744595502813267	2				NaN	NaN	0	NaN	4157	2951	7104
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7111	22.067	NaN	5077.1	30	0	754.66	0.035			+	21176	KKWNVQIE	8	65	522.7953385809531	NaN	0	522.7881469726562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KKWNVQIE_	REV__ENST00000526269.2_1_11:128561691-128562836:-|nuORF	84.9155231211612	1.7418937515398478	2				NaN	NaN	0	NaN	4158	2951	7104
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7126	22.099	NaN	25331	30	0	3461.9	0.208	+			16203	HECASINRI	9	78	550.2684953777591	1098.5224378223181	2	550.26953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_HEC(Carbamidomethyl (C))ASINRI_	ENSG00000172531|ENST00000376745|PPP1CA;ENSG00000186298|ENST00000335007|PPP1CC;ENSG00000213639|ENST00000395366|PPP1CB;ENST00000526510.5_1_11:67166008-67168740:-|nuORF;ENST00000532446.5_1_11:67166008-67168991:-|nuORF;nc|ENSG00000172531|P62136-2|PPP1CA;nc|ENSG00000172531|P62136-3|PPP1CA;nc|ENSG00000186298|P36873-2|PPP1CC;PPP1CB|p.E217Rfs*3|1|0.29|ENSG00000213639|chr2:28788708-28788709|-/G|frameshift_variant	112.41091882917199	0.026537921851008135	2				NaN	NaN	0	NaN	4170	2954	7125
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7127	22.103	NaN	5907.5	30	0	619.3	0.106	+			34010	RSIQVDGKTIK	11	80	415.58175316421216	1243.7234300928365	3	415.5820617675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RSIQVDGKTIK_	ENSG00000103769|ENST00000261890|RAB11A;ENSG00000185236|ENST00000328024|RAB11B;ENST00000598706.1_1_19:8455252-8465174:+|nuORF;nc|ENSG00000103769|P62491-2|RAB11A;nc|ENSG00000185236|Q15907-2|RAB11B	54.00501255817391	0.3769686337559935	2				NaN	NaN	0	NaN	4171	2954	7125
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7128	22.105	NaN	9673.3	30	0	4199	0.106	+			24205	LERFKTEA	8	67	497.2723578960323	NaN	0	497.27154541015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LERFKTEA_	ENSG00000022556|ENST00000448584|NLRP2;ENST00000540597.5_1_19:55476735-55501561:+|nuORF;nc|ENSG00000022556|Q9NX02-2|NLRP2;nc|ENSG00000022556|Q9NX02-3|NLRP2;nc|ENSG00000022556|Q9NX02-5|NLRP2;NLRP2|p.N1038Tfs*4|2|0.38|ENSG00000022556|chr19:55000816-55000816|A/-|frameshift_variant	66.42927471994793	1.7418937515398478	2				NaN	NaN	0	NaN	4172	2954	7125
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7129	22.107	NaN	9711.8	30	0	3304.3	0.106			+	26684	LVGVRPAE	8	58	420.74905451649227	839.4835560997846	2	420.7502746582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LVGVRPAE_	REV__ENST00000394456.9_1_19:6393018-6393183:-|nuORF;REV__ENST00000598607.1_3_19:6393018-6393985:-|nuORF	51.33545320467046	0.5859736979383976	2				NaN	NaN	0	NaN	4173	2954	7125
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7130	22.108	NaN	13867	30	0	2567.8	0.106	+			134	AAGPSCALK	9	67	409.21490928171806	816.4152656302361	2	409.21539306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AAGPSCALK_	ENSG00000125968|ENST00000376112|ID1;ID1|p.G120Afs*20|1|0.38|ENSG00000125968|chr20:31605737-31605737|C/-|frameshift_variant;nc|ENSG00000125968|P41134-2|ID1	77.31757898189308	0.1091473830098891	2				NaN	NaN	0	NaN	4174	2954	7125
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7131	22.11	NaN	13964	30	0	7279.3	0.106	+			21997	KSFGELVHK	9	73	348.86580174432856	1043.5755758331857	3	348.865966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KSFGELVHK_	ENSG00000071054|ENST00000324219|MAP4K4;MAP4K4|p.G1177Efs*5|1|0.19|ENSG00000071054|chr2:101888826-101888826|G/-|frameshift_variant;nc|ENSG00000071054|O95819-2|MAP4K4;nc|ENSG00000071054|O95819-3|MAP4K4;nc|ENSG00000071054|O95819-4|MAP4K4;nc|ENSG00000071054|O95819-5|MAP4K4;nc|ENSG00000071054|O95819-6|MAP4K4;nc|ENSG00000071054|O95819|MAP4K4	52.936696900407355	0.27249468807391813	2				NaN	NaN	0	NaN	4175	2954	7125
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7132	22.112	NaN	1733.9	30	0	175.41	0.037	+			32231	QTELGRAHAR	10	60	569.8079486691776	1137.601344405155	2	569.8090209960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QTELGRAHAR_	ENST00000261692.6_1_12:123751765-123756364:-|nuORF	25.57405402267927	0.6709832231498071	2				NaN	NaN	0	NaN	4176	2954	7125
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7147	22.142	NaN	47548	30	0	18349	0.214				-1	 	0	80	408.22532969816774	814.4361064631355	2	408.2257080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4188	2957	7146
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7148	22.145	NaN	39576	30	0	12043	0.106			+	4695	ATLSRTVAVA	10	64	330.1974565404558	987.5705402215674	3	330.1976623535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATLSRTVAVA_	REV__ENST00000395756.5_1_17:17715938-17721122:-|nuORF	51.52775601994872	0.4429225830406686	2				NaN	NaN	0	NaN	4189	2957	7146
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7149	22.147	NaN	7007.9	30	0	609.34	0.106	+			5648	AVDDRGLYK	9	75	518.7744657884799	1035.5343786437597	2	518.7748413085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVDDRGLYK_	ENSG00000140612|ENST00000268220|SEC11A;nc|ENSG00000140612|P67812-2|SEC11A;nc|ENSG00000140612|P67812-3|SEC11A;nc|ENSG00000140612|P67812-4|SEC11A;nc|ENSG00000226098|P0C7V7|SEC11B	82.7504851949679	0.08565546331141553	2				NaN	NaN	0	NaN	4190	2957	7146
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7150	22.149	NaN	14939	30	0	6973.8	0.106			+	42415	TAKRATQKT	9	46	335.5330917716382	NaN	0	335.5331115722656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TAKRATQKT_	REV__ENSG00000268799|ENST00000600799|H3Y2;REV__ENSG00000269466|ENST00000598383|H3Y1	23.52269567125451	0.3573684076213556	2				NaN	NaN	0	NaN	4191	2957	7146
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7151	22.151	NaN	12470	30	0	1292.2	0.106	+			38102	SPVNSSKQPSY	11	76	597.2931579057762	1192.5717628783523	2	597.2935180664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SPVNSSKQPSY_	ENSG00000159199|ENST00000393366|ATP5MC1;ENST00000502964.5_1_17:46971694-46973128:+|nuORF;ENST00000513781.5_1_17:46970480-46973128:+|nuORF	181.87364410229196	6.9370476059076056E-06	2				NaN	NaN	0	NaN	4192	2957	7146
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7152	22.153	NaN	8723.7	30	0	3855.7	0.033	+			37858	SNPGGRPAL	9	67	434.73489006087306	867.4552271885461	2	434.7351379394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SNPGGRPAL_	ENSG00000114554|ENST00000393409|PLXNA1;PLXNA1|p.Q1019Rfs*22|3|0.36|ENSG00000114554|chr3:127016548-127016548|C/-|frameshift_variant	77.31757898189308	0.1091473830098891	2				NaN	NaN	0	NaN	4193	2957	7146
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7153	22.153	NaN	3586	30	0	544.89	0.14	+			31676	QNIQRTIAT	9	65	522.7953385809531	NaN	0	522.7957153320312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QNIQRTIAT_	ENSG00000002746|ENST00000395891|HECW1;HECW1|p.F1315*|1|0.35|ENSG00000002746|chr7:43509045-43509046|TT/-|frameshift_variant;nc|ENSG00000002746|Q76N89-2|HECW1	42.396135135203025	0.2590952873412954	2				NaN	NaN	0	NaN	4194	2957	7146
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7171	22.19	NaN	26307	30	0	10102	0.214	+			35398	SAQNTKFFK	9	76	357.5254820042396	1069.5546166129188	3	357.5257568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAQNTKFFK_	ENSG00000140259|ENST00000267812|MFAP1;ENST00000484386.1_1_15:44097294-44102132:-|nuORF	104.74654710444128	0.034358562718640136	2				NaN	NaN	0	NaN	4209	2960	7170
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7172	22.194	NaN	20957	30	0	7907.6	0.106				-1	 	0	61	368.88860420897237	1103.6439832271171	3	368.8888854980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4210	2960	7170
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7173	22.196	NaN	13662	30	0	3021.2	0.106	+			49332	VVSETLAQK	9	80	487.7786597646004	973.5427665960008	2	487.77923583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVSETLAQK_	ENSG00000198842|ENST00000361200|STYXL2	106.68306549817024	0.032382560583716295	2				NaN	NaN	0	NaN	4211	2960	7170
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7174	22.197	NaN	24938	30	0	4900.9	0.106	+			23875	LDGGARIHHY	10	83	380.1962687897267	1137.56697696938	3	380.1965026855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LDGGARIHHY_	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42|TTN;TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant	40.77816245573522	0.5419747034533848	2				NaN	NaN	0	NaN	4212	2960	7170
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7175	22.199	NaN	7643.1	30	0	2480.5	0.106	+			3631	ASVYQPLKK	9	52	345.20599303444874	1032.5961497035462	3	345.2061462402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASVYQPLKK_	ENSG00000204178|ENST00000374343|MACO1;nc|ENSG00000204178|Q8N5G2-2|MACO1;nc|ENSG00000204178|Q8N5G2-3|MACO1	49.536043120802724	0.308405419312776	2				NaN	NaN	0	NaN	4213	2960	7170
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7176	22.201	NaN	3476.9	30	0	523.1	0.036	+			34653	RVQVVGTYR	9	70	539.3111133789023	1076.6076738246045	2	539.3118896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RVQVVGTYR_	ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3	70.39856735676683	0.13906523160059378	2				NaN	NaN	0	NaN	4214	2960	7170
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7177	22.202	NaN	5852.3	30	0	1137.8	0.139	+			8315	EAKDNIYK	8	65	490.75516965867604	979.4957863841521	2	490.755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EAKDNIYK_	tr|U7T3E0|U7T3E0_FUSNUUbiDfamilydecarboxylaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00236PE=4SV=1	62.107414245175825	0.4809183816468817	2				NaN	NaN	0	NaN	4215	2960	7170
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7190	22.231	NaN	17236	30	0	2838.3	0.214	+			4723	ATMEVKVGR	9	80	495.77321105422214	989.5318691752443	2	495.7733459472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATMEVKVGR_	ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1	109.47833844074708	0.029530294723441826	2				NaN	NaN	0	NaN	4225	2963	7189
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7191	22.234	NaN	12604	30	0	4466.8	0.106			+	28629	NKYVNRHTF	9	65	393.5397717545957	1177.597485863987	3	393.54022216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NKYVNRHTF_	REV__PRDM5|p.A386T|1|0.21|ENSG00000138738|chr4:120798299-120798299|C/T|missense_variant	32.81241826257853	0.4965981579233955	2				NaN	NaN	0	NaN	4226	2963	7189
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7192	22.236	NaN	9370.6	30	0	4116.7	0.106	+			51180	YPHATHDL	8	65	477.2267282976083	952.4389036620166	2	477.2269287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YPHATHDL_	ENSG00000169564|ENST00000303577|PCBP1	60.29395666154354	0.49887135096048313	2				NaN	NaN	0	NaN	4227	2963	7189
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7193	22.238	NaN	20652	30	0	11425	0.106	+			5919	AVLEKQDISDK	11	75	415.8938540099467	1244.6597326300403	3	415.8940734863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVLEKQDISDK_	ENSG00000135932|ENST00000258418|CAB39	73.84112541714126	0.20371746787051248	2				NaN	NaN	0	NaN	4228	2963	7189
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7194	22.24	NaN	5415.7	30	0	2640	0.106	+			257	AAMLMPHQK	9	47	342.84514008930546	1025.5135908681164	3	342.845458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AAMLMPHQK_	ENSG00000138663|ENST00000264389|COPS4;nc|ENSG00000138663|Q9BT78-2|COPS4	31.954861631926434	0.5046124803899898	2				NaN	NaN	0	NaN	4229	2963	7189
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7195	22.242	NaN	12225	30	0	1907.4	0.036	+			32821	RAYPHVFTK	9	80	559.8087304038462	1117.6029078744923	2	559.8089599609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RAYPHVFTK_	ENSG00000164405|ENST00000378670|UQCRQ;ENST00000498309.1_1_5:132202377-132202798:+|nuORF;UQCRQ|p.G34A|1|0.04|ENSG00000164405|chr5:132866982-132866982|G/C|missense_variant	109.47833844074708	0.029530294723441826	2				NaN	NaN	0	NaN	4230	2963	7189
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7196	22.242	NaN	4946.5	30	0	871.4	0.141	+			5847	AVINEDPNAK	10	70	535.7767610815341	1069.5389692298681	2	535.7777709960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AVINEDPNAK_	ENSG00000054523|ENST00000676179|KIF1B;nc|ENSG00000054523|O60333-2|KIF1B;nc|ENSG00000054523|O60333-3|KIF1B;nc|ENSG00000054523|O60333-4|KIF1B	85.86182877749512	0.1547657473298402	2				NaN	NaN	0	NaN	4231	2963	7189
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7211	22.276	NaN	22359	30	0	6464.7	0.214	+			3926	ATASPIVAR	9	76	443.2611677557746	884.5077825783492	2	443.2611389160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATASPIVAR_	ENSG00000131725|ENST00000254029|WDR44;nc|ENSG00000131725|Q5JSH3-2|WDR44;nc|ENSG00000131725|Q5JSH3-4|WDR44;WDR44|p.N542Mfs*11|2|0.39|ENSG00000131725|chrX:118409575-118409575|A/-|frameshift_variant	115.49404669440601	0.023927554121326553	2				NaN	NaN	0	NaN	4243	2966	7210
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7212	22.279	NaN	16459	30	0	3370.9	0.106	+			2457	APLKSKMIY	9	81	533.8011180716212	1065.5876832100423	2	533.8026733398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_APLKSKM(Oxidation (M))IY_	ENSG00000125868|ENST00000246069|DSTN;ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65623104-65623215:-|nuORF;ENST00000602547.1_1_12:6994092-6994545:+|nuORF;nc|ENSG00000125868|P60981-2|DSTN;nc|ENSG00000165410|Q9Y281-3|CFL2	93.1432384553994	0.056003526918089595	2				NaN	NaN	0	NaN	4244	2966	7210
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7213	22.281	NaN	7093.1	30	0	1940.8	0.106				-1	 	0	72	504.2974143132154	1006.5802756932309	2	504.2979431152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4245	2966	7210
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7214	22.283	NaN	7509.4	30	0	672.24	0.106	+			13482	GLLLIMALM	9	82	487.79438674119206	NaN	0	487.7944641113281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GLLLIMALM_	ENSG00000185900|ENST00000331373|POMK	49.21078951299608	0.21213183292994464	2				NaN	NaN	0	NaN	4246	2966	7210
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7215	22.285	NaN	4863	30	0	503.93	0.106	+			28973	NSGNYLNPA	9	69	475.222150296633	948.429747660066	2	475.22216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NSGNYLNPA_	ENSG00000102098|ENST00000251900|SCML2	37.81151784470057	0.4459294069877048	2				NaN	NaN	0	NaN	4247	2966	7210
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7216	22.287	NaN	4888.8	30	0	953.04	0.034	+			47351	VPEARGAAGP	10	64	462.7480296566039	923.4815063800078	2	462.7483825683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VPEARGAAGP_	ENST00000515008.1_1_5:138283142-138289110:-|nuORF	40.77816245573522	0.5419747034533848	2				NaN	NaN	0	NaN	4248	2966	7210
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7217	22.287	NaN	6457.3	30	0	1758.9	0.14			+	31332	QIRLSEQY	8	65	518.7744657884799	1035.5343786437597	2	519.2778930664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QIRLSEQY_	REV__ENSG00000126561|ENST00000590949|STAT5A;REV__ENSG00000173757|ENST00000293328|STAT5B;REV__ENST00000468312.1_1_17:40370167-40384145:-|nuORF;REV__nc|ENSG00000126561|P42229-2|STAT5A;REV__STAT5B|p.H584Tfs*8|3|0.33|ENSG00000173757|chr17:42210428-42210429|-/T|frameshift_variant;REV__STAT5B|p.K583Nfs*16|2|0.34|ENSG00000173757|chr17:42210429-42210429|T/-|frameshift_variant	44.116797842482775	0.6307669463330267	2				NaN	NaN	0	NaN	4249	2966	7210
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7230	22.317	NaN	99814	30	0	42959	0.214	+			19273	KAFNQGKIFK	10	111	394.23247763230216	1179.6756034971065	3	394.2327575683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAFNQGKIFK_	ENSG00000254772|ENST00000329251|EEF1G;ENST00000526409.5_1_11:62327153-62342310:-|nuORF;nc|ENSG00000254772|P26641-2|EEF1G;NCEH1-EEF1G|1|fusion	93.19546047674547	0.11277922692270353	2				NaN	NaN	0	NaN	4259	2969	7229
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7231	22.32	NaN	22449	30	0	4843.1	0.106	+			36590	SGAQPILSK	9	77	450.7605069761109	899.5064610190218	2	450.7608947753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SGAQPILSK_	ENSG00000105355|ENST00000221957|PLIN3;nc|ENSG00000105355|O60664-3|PLIN3;nc|ENSG00000105355|O60664-4|PLIN3	162.63603312974413	0.004023911058767669	2				NaN	NaN	0	NaN	4260	2969	7229
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7232	22.322	NaN	4844.9	30	0	754.54	0.106	+			20838	KIIEVHVEK	9	72	547.8316453303256	1093.6487377274511	2	547.8326416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KIIEVHVEK_	ENSG00000140403|ENST00000394852|DNAJA4;ENST00000485075.1_1_15:78562865-78566840:+|nuORF;nc|ENSG00000140403|Q8WW22-2|DNAJA4;nc|ENSG00000140403|Q8WW22-3|DNAJA4	104.42354056486148	0.0346881550498418	2				NaN	NaN	0	NaN	4261	2969	7229
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7233	22.324	NaN	6138.1	30	0	729.91	0.106	+			32493	QVPTIPQDT	9	71	499.76124714420075	NaN	0	499.76129150390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QVPTIPQDT_	SGOL1|p.I161V|1|0.08|ENSG00000129810|chr3:20175050-20175050|T/C|missense_variant	35.61828744233558	0.29773779453147337	2				NaN	NaN	0	NaN	4262	2969	7229
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7234	22.326	NaN	10999	30	0	4632.7	0.106	+			30573	QANDDARTF	9	81	519.2355016872679	1036.4564504413356	2	519.236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QANDDARTF_	ENSG00000181029|ENST00000596148|TRAPPC5	58.22992032128504	0.22837015374068087	2				NaN	NaN	0	NaN	4263	2969	7229
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7235	22.328	NaN	19807	30	0	2825.4	0.038			+	2526	APVPAVPFPAW	11	81	384.5481722365661	1150.6226873098983	3	384.5484313964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_APVPAVPFPAW_	REV__ENSG00000179455|ENST00000314520|MKRN3;REV__MKRN3|p.A162Gfs*15|1|0.42|ENSG00000179455|chr15:23566257-23566258|-/C|frameshift_variant;REV__MKRN3|p.N325Qfs*2|1|0.36|ENSG00000179455|chr15:23566750-23566751|-/C|frameshift_variant	31.954861631926434	0.6546107591430316	2				NaN	NaN	0	NaN	4264	2969	7229
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7236	22.328	NaN	6050	30	0	2447.1	0.141			+	24681	LGYHRKKR	8	57	353.21660780550474	1056.6279940167142	3	353.21685791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LGYHRKKR_	REV__ENSG00000129667|ENST00000675367|RHBDF2;REV__ENST00000587640.1_1_17:74472910-74477606:-|nuORF;REV__ENST00000589582.5_1_17:74470614-74477615:-|nuORF;REV__ENST00000590168.5_1_17:74469085-74473795:-|nuORF;REV__nc|ENSG00000129667|Q6PJF5|RHBDF2;REV__RHBDF2|p.A471Pfs*208|1|0.15|ENSG00000129667|chr17:76474513-76474513|C/-|frameshift_variant	24.20275056022122	0.7724576178584145	2				NaN	NaN	0	NaN	4265	2969	7229
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7254	22.365	NaN	219200	30	0	26018	0.155			+	39722	STIRETSAKQ	10	111	560.8023810988947	1119.5902092645892	2	560.80322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STIRETSAKQ_	REV__ENSG00000163069|ENST00000381431|SGCB;REV__nc|ENSG00000163069|Q16585-2|SGCB	47.95952297671804	0.47580206326914537	2				NaN	NaN	0	NaN	4280	2972	7253
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7255	22.368	NaN	89601	30	0	33587	0.106				-1	 	0	80	374.20442197181956	1119.5914365156586	3	374.20465087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4281	2972	7253
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7256	22.37	NaN	27200	30	0	9154.9	0.106	+			39576	STGNMVISK	9	80	468.7439401900578	935.4733274469156	2	468.74420166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STGNMVISK_	ENSG00000102837|ENST00000219022|OLFM4	131.115847015877	0.014647977962315902	2				NaN	NaN	0	NaN	4282	2972	7253
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7257	22.372	NaN	15528	30	0	1839	0.106			+	36933	SILGPHFF	8	78	459.249636236681	916.484719540162	2	459.7445983886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SILGPHFF_	REV__sp|P16784|ITP_HCMVAInnertegumentproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL47PE=1SV=2;REV__sp|Q6SW85|ITP_HCMVMInnertegumentproteinOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL47PE=3SV=1	39.021493756699265	0.6623843612266921	2				NaN	NaN	0	NaN	4283	2972	7253
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7258	22.374	NaN	8725	30	0	2453.3	0.106				-1	 	0	78	423.2575836284263	844.5006143236526	2	423.2579650878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4284	2972	7253
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7259	22.375	NaN	11065	30	0	2404.4	0.106	+			17042	HPYQPDPKM	9	74	556.7624774571012	1111.5104019810024	2	556.7633666992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HPYQPDPKM_	CBX4|p.E288Rfs*117|1|0.35|ENSG00000141582|chr17:79834780-79834780|C/-|frameshift_variant;CBX4|p.N231Tfs*3|2|0.38|ENSG00000141582|chr17:79834952-79834952|G/-|frameshift_variant;ENSG00000141582|ENST00000269397|CBX4	65.46538089061403	0.16805504838372562	2				NaN	NaN	0	NaN	4285	2972	7253
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7260	22.377	NaN	4826	30	0	583.22	0.035	+			25899	LSGFVALFH	9	66	495.77321105422214	989.5318691752443	2	496.2744445800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSGFVALFH_	ENSG00000111432|ENST00000229030|FZD10	42.47446043378293	0.39123495718708534	2				NaN	NaN	0	NaN	4286	2972	7253
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7275	22.408	NaN	15492	30	0	2599.4	0.214	+			46200	VEAEKQAAL	9	69	479.763414866317	957.5122767994341	2	479.7635498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VEAEKQAAL_	ENSG00000143850|ENST00000272203|PLEKHA6;PLEKHA6|p.D852Tfs*20|1|0.44|ENSG00000143850|chr1:204230443-204230443|G/-|frameshift_variant	88.17693792209575	0.07000514020414955	2				NaN	NaN	0	NaN	4298	2975	7274
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7276	22.411	NaN	31117	30	0	11042	0.106	+			14206	GSSEPITVK	9	74	459.249636236681	916.484719540162	2	459.2501525878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSSEPITVK_	ENSG00000066044|ENST00000407627|ELAVL1;nc|ENSG00000066044|Q15717-2|ELAVL1	75.04331003522576	0.118981335847003	2				NaN	NaN	0	NaN	4299	2975	7274
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7277	22.413	NaN	6950.3	30	0	998.95	0.106	+			46855	VIIAKVTAK	9	72	471.8205704720968	941.6265880109936	2	471.820556640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VIIAKVTAK_	ENSG00000155008|ENST00000373173|APOOL	80.45461616416974	0.09558281504443908	2				NaN	NaN	0	NaN	4300	2975	7274
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7278	22.415	NaN	6760.2	30	0	3641.1	0.106	+			26833	LVTPRSAP	8	57	420.74905451649227	839.4835560997846	2	421.247802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LVTPRSAP_	ENST00000466620.5_1_20:3653963-3654391:-|nuORF	47.91560031466742	0.6071945918984287	2				NaN	NaN	0	NaN	4301	2975	7274
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7279	22.417	NaN	10541	30	0	1110.5	0.106	+			8068	DVLKTNRQK	9	73	551.3216469815611	1100.6287410299221	2	551.3228149414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DVLKTNRQK_	ENST00000606851.5_1_6:22020665-22056887:+|nuORF	44.116797842482775	0.37197099687881774	2				NaN	NaN	0	NaN	4302	2975	7274
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7280	22.419	NaN	7219.2	30	0	1925.3	0.034	+			6363	AVTTVVNPK	9	66	464.7761732048048	927.5377934764097	2	464.7763977050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AVTTVVNPK_	ENSG00000150093|ENST00000302278|ITGB1	87.69643885390035	0.07135982304947239	2				NaN	NaN	0	NaN	4303	2975	7274
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7281	22.419	NaN	9203.3	30	0	856.57	0.139	+			20671	KGLYEKGR	8	68	475.7741022030649	949.5336514729298	2	475.77410888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KGLYEKGR_	ENSG00000135473|ENST00000440411|PAN2;ENST00000547226.5_1_12:56711395-56716647:-|nuORF;ENST00000551359.5_1_12:56711395-56713019:-|nuORF;ENST00000553230.1_1_12:56711395-56712273:-|nuORF;nc|ENSG00000135473|Q504Q3-3|PAN2;nc|ENSG00000135473|Q504Q3|PAN2	66.42927471994793	0.4381325844043345	2				NaN	NaN	0	NaN	4304	2975	7274
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7298	22.456	NaN	6224.9	30	0	1861.9	0.214			+	5050	ATSGTFALK	9	60	448.2472885078513	894.4800240825026	2	448.2474670410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSGTFALK_	REV__tr|U7SHE9|U7SHE9_FUSNUAldehydedehydrogenasedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02287PE=3SV=1	54.776311868738084	0.25715957988447635	2				NaN	NaN	0	NaN	4318	2978	7297
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7299	22.46	NaN	8204.7	30	0	1548.7	0.106				-1	 	0	56	427.75787390945845	853.5011948857169	2	427.7581787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4319	2978	7297
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7300	22.462	NaN	7978.1	30	0	3314.9	0.106	+			34899	SAADLDNRFRK	11	54	431.56113306535076	1291.6615697962523	3	431.5615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAADLDNRFRK_	ENSG00000169047|ENST00000305123|IRS1;IRS1|p.H598Tfs*38|3|0.31|ENSG00000169047|chr2:226796948-226796948|C/-|frameshift_variant	43.650786325866115	0.5079891456189096	2				NaN	NaN	0	NaN	4320	2978	7297
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7301	22.464	NaN	10397	30	0	3081.3	0.106	+			30605	QARAAVDTY	9	66	497.7506902032746	993.4868274733492	2	497.75091552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QARAAVDTY_	ENSG00000196126|ENST00000360004|HLA-DRB1	131.03138772384656	0.014687601201650916	2				NaN	NaN	0	NaN	4321	2978	7297
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7302	22.466	NaN	20597	30	0	8424.8	0.106			+	-1	ASWGSHCFLV	10	78	388.51552593021586	1162.5247483908477	3	388.5159912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_ASWGSHC(Carbamidomethyl (C))FLV_	REV__ENST00000586325.5_1_17:76374746-76376988:+|nuORF	35.15202426646627	0.5927656479315102	2				NaN	NaN	0	NaN	4322	2978	7297
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7303	22.467	NaN	6191.8	30	0	1358.4	0.106	+			39034	SSSLRVLVY	9	44	341.86564658406087	1022.5751103523826	3	341.8658142089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSSLRVLVY_	ENSG00000146414|ENST00000275233|SHPRH;ENST00000433355.6_1_6:146231577-146267398:-|nuORF;nc|ENSG00000146414|Q149N8-2|SHPRH;nc|ENSG00000146414|Q149N8-4|SHPRH;SHPRH|p.L762Wfs*6|1|0.29|ENSG00000146414|chr6:145941828-145941828|A/-|frameshift_variant	34.172542307311794	0.4838870758800184	2				NaN	NaN	0	NaN	4323	2978	7297
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7304	22.469	NaN	5682.5	30	0	902.62	0.034			+	13378	GLASSNKKT	9	66	453.25557546981895	904.4965980064379	2	453.2560729980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GLASSNKKT_	REV__SVA_D_dup1229|chr17:30522805-30524227:+|1.675571116190744|0.476847412502663|1.81|481.0|20|2|sense;REV__SVA_D_dup628|chr7:140430960-140432406:+|1.004965212380795|0.4952733165024275|1.02|477.0|21|2|sense	35.61828744233558	0.47037581924408073	2				NaN	NaN	0	NaN	4324	2978	7297
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7316	22.495	NaN	34286	30	0	4454.6	0.214	+			42537	TARMRVAP	8	89	451.2558261690694	900.4970994049388	2	451.25726318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TARMRVAP_	nc|ENSG00000125755|Q92797-2|SYMPK	42.47446043378293	0.6409579893742323	2				NaN	NaN	0	NaN	4333	2981	7315
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7317	22.498	NaN	25820	30	0	10933	0.106				-1	DTEDDPLLQ	9	83	363.1648219361794	1086.4726364087383	3	363.16522216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))DTEDDPLLQ_	ENSG00000204624|ENST00000294484|DISP3;nc|ENSG00000204624|Q9P2K9-2|DISP3	80.45461616416974	0.09558281504443908	2				NaN	NaN	0	NaN	4334	2981	7315
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7318	22.5	NaN	31172	30	0	4094.1	0.106	+			34165	RTATIMIQK	9	83	531.3093252297025	1060.604097526205	2	531.3109130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RTATIMIQK_	ENSG00000167306|ENST00000285039|MYO5B	114.85826248499774	0.024312442104607014	2				NaN	NaN	0	NaN	4335	2981	7315
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7319	22.502	NaN	8389.6	30	0	2345.3	0.106				-1	 	0	62	360.5448241410821	1078.6126430234463	3	360.5450744628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4336	2981	7315
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7320	22.504	NaN	17003	30	0	3948.1	0.106	+			4001	ATCDHPYIVK	10	79	401.8653770087727	1202.5743016265183	3	401.8658752441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_ATC(Carbamidomethyl (C))DHPYIVK_	ENSG00000072786|ENST00000176763|STK10;ENST00000519710.1_1_5:171533786-171583726:-|nuORF;STK10|p.T526Pfs*15|3|0.11|ENSG00000072786|chr5:172090341-172090341|T/-|frameshift_variant	59.93077597824379	0.36646980200755325	2				NaN	NaN	0	NaN	4337	2981	7315
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7321	22.506	NaN	2871.9	30	0	216.41	0.036	+			46831	VIEHIQVNK	9	70	540.3135002961936	1078.6124476591872	2	540.3142700195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VIEHIQVNK_	ENSG00000265681|ENST00000580261|RPL17;ENST00000394133.2_1_10:95043842-95044274:-|nuORF;ENST00000414070.1_1_1:109535017-109535455:+|nuORF;ENST00000446498.1_1_1:26781156-26781564:-|nuORF;nc|ENSG00000265681|P18621-2|RPL17;nc|ENSG00000265681|P18621-3|RPL17	107.00750918261382	0.032051501805654005	2				NaN	NaN	0	NaN	4338	2981	7315
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7322	22.506	NaN	3641.8	30	0	455.6	0.14			+	26100	LSNMSLLMQ	9	60	526.7587993395593	1051.5030457459186	2	526.7599487304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_LSNM(Oxidation (M))SLLMQ_	REV__ENSG00000089053|ENST00000261819|ANAPC5;REV__ENST00000534976.5_1_12:121756302-121773353:-|nuORF;REV__ENST00000535472.5_1_12:121764442-121775147:-|nuORF;REV__ENST00000535641.5_1_12:121746285-121765135:-|nuORF;REV__ENST00000538334.1_1_12:121764442-121765135:-|nuORF;REV__ENST00000545218.5_1_12:121756099-121775126:-|nuORF;REV__nc|ENSG00000089053|Q9UJX4-3|ANAPC5	66.42927471994793	0.16001998865088202	2				NaN	NaN	0	NaN	4339	2981	7315
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7338	22.542	NaN	32803	30	0	14356	0.214			+	48480	VTLVHEAR	8	66	462.76621678804787	923.5178806428958	2	462.7664794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTLVHEAR_	REV__DCHS1|p.G2765Rfs*10|1|0.26|ENSG00000166341|chr11:6623383-6623384|-/T|frameshift_variant;REV__DCHS1|p.H2834Sfs*7|1|0.44|ENSG00000166341|chr11:6623177-6623178|-/C|frameshift_variant;REV__ENSG00000166341|ENST00000299441|DCHS1	76.84663266511073	0.3498490246073164	2				NaN	NaN	0	NaN	4352	2984	7337
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7339	22.545	NaN	7672.3	30	0	1628.8	0.106	+			38791	SSMSTALSK	9	59	456.22817188398824	910.4417908347765	2	456.2285461425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSMSTALSK_	nc|ENSG00000138119|Q9NZM1-3|MYOF	106.68306549817024	0.032382560583716295	2				NaN	NaN	0	NaN	4353	2984	7337
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7340	22.547	NaN	18334	30	0	6778	0.106				-1	 	0	68	487.2504616905081	972.4863704478162	2	487.2508850097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4354	2984	7337
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7341	22.549	NaN	7283.9	30	0	672.43	0.106	+			36672	SGMQNMSIHTK	11	64	411.86158648524804	1232.5629300559442	3	411.86199951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SGMQNMSIHTK_	CON__H-INV:HIT000292931;CON__P05787;CON__REFSEQ:XP_092267;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	70.72838890466396	0.22966736524121345	2				NaN	NaN	0	NaN	4355	2984	7337
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7342	22.551	NaN	8258.6	30	0	2326.7	0.106	+			18480	ISGAVKPSLK	10	55	333.8778319506455	998.6116664521364	3	333.8780212402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ISGAVKPSLK_	tr|U7SWR2|U7SWR2_FUSNUAutotransporterdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00953PE=4SV=1	37.81151784470057	0.569310847604193	2				NaN	NaN	0	NaN	4356	2984	7337
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7343	22.553	NaN	4894.2	30	0	1473.7	0.04			+	49298	VVQNSFEKMEE	11	56	447.2134704724061	1338.6185820174182	3	447.21405029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VVQNSFEKMEE_	REV__CON__ENSEMBL:ENSP00000377550;REV__CON__P08730-1;REV__CON__P13646-1;REV__ENSG00000171401|ENST00000246635|KRT13;REV__ENST00000468313.5_1_17:39657932-39661743:-|nuORF;REV__nc|ENSG00000171401|P13646-2|KRT13;REV__nc|ENSG00000171401|P13646-3|KRT13	23.37791116691581	0.7445759747191538	2				NaN	NaN	0	NaN	4357	2984	7337
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7344	22.553	NaN	7491.3	30	0	1926.4	0.143			+	-1	ATRFMHIPLG	10	62	386.8740914444341	1157.6004449335023	3	386.87457275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_ATRFM(Oxidation (M))HIPLG_	REV__ENSG00000167910|ENST00000301645|CYP7A1	35.15202426646627	0.5927656479315102	2				NaN	NaN	0	NaN	4358	2984	7337
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7358	22.585	NaN	202810	30	0	47107	0.184	+			38179	SQCGSLIGK	9	97	475.2414784017306	948.4684038702612	2	475.2418518066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SQC(Carbamidomethyl (C))GSLIGK_	ENSG00000090097|ENST00000461554|PCBP4;ENSG00000183570|ENST00000681687|PCBP3;ENSG00000197111|ENST00000546463|PCBP2;ENST00000468429.5_1_21:47321003-47359956:+|nuORF;ENST00000492809.5_1_3:51992079-51994784:-|nuORF;ENST00000497390.5_1_3:51992079-51994784:-|nuORF;ENST00000547717.1_1_12:53848575-53861193:+|nuORF;ENST00000548190.1_1_12:53849722-53854210:+|nuORF;nc|ENSG00000090097|P57723-2|PCBP4;nc|ENSG00000183570|P57721-2|PCBP3;nc|ENSG00000183570|P57721-3|PCBP3;nc|ENSG00000183570|P57721-4|PCBP3;nc|ENSG00000183570|P57721-5|PCBP3;nc|ENSG00000197111|Q15366-2|PCBP2;nc|ENSG00000197111|Q15366-4|PCBP2;nc|ENSG00000197111|Q15366-5|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;nc|ENSG00000197111|Q15366-7|PCBP2;nc|ENSG00000197111|Q15366-8|PCBP2;nc|ENSG00000197111|Q15366|PCBP2;PCBP2|p.T202Kfs*26|1|0.32|ENSG00000197111|chr12:53464773-53464773|C/-|frameshift_variant;PCBP4|p.G203Efs*11|1|0.1|ENSG00000090097|chr3:51959397-51959398|-/CTCT|frameshift_variant	99.01295224348159	0.040209060045561164	2				NaN	NaN	0	NaN	4369	2987	7357
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7359	22.588	NaN	32880	30	0	6930.5	0.106				-1	 	0	98	417.91487804182555	1250.7228047256767	3	417.9154357910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4370	2987	7357
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7360	22.59	NaN	12390	30	0	2803.9	0.106				-1	 	0	68	445.25258102900324	888.4906091248065	2	445.25286865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4371	2987	7357
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7361	22.592	NaN	8283.4	30	0	1034	0.106	+			46424	VERGPDEAM	9	73	502.2287500065583	1002.4429470799166	2	502.2292785644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VERGPDEAM_	ENSG00000024422|ENST00000263277|EHD2;ENST00000540884.1_1_19:48232905-48244686:+|nuORF;nc|ENSG00000024422|Q9NZN4-2|EHD2	98.58198989935565	0.04066992115528678	2				NaN	NaN	0	NaN	4372	2987	7357
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7362	22.594	NaN	5700	30	0	1157.3	0.106	+			43410	TGKEIIIEER	10	54	396.5588120844591	1186.6546068535772	3	396.5591735839844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TGKEIIIEER_	ENSG00000037757|ENST00000040663|MRI1;MRI1|p.H330Tfs*24|4|0.35|ENSG00000037757|chr19:13772154-13772154|C/-|frameshift_variant;nc|ENSG00000037757|Q9BV20-2|MRI1	40.05817265558897	0.5486090488315611	2				NaN	NaN	0	NaN	4373	2987	7357
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7363	22.595	NaN	12120	30	0	2425.8	0.106	+			35316	SAMSNPRAM	9	68	482.7196002469301	963.4246475606602	2	482.7201843261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SAMSNPRAM_	ENSG00000135018|ENST00000376395|UBQLN1;ENSG00000188021|ENST00000338222|UBQLN2;nc|ENSG00000135018|Q9UMX0-2|UBQLN1;nc|ENSG00000135018|Q9UMX0-3|UBQLN1;UBQLN2|p.P525Lfs*71|10|0.37|ENSG00000188021|chrX:56565441-56565441|C/-|frameshift_variant	98.58198989935565	0.04066992115528678	2				NaN	NaN	0	NaN	4374	2987	7357
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7364	22.597	NaN	5629.9	30	0	335.43	0.036			+	9498	EKTMMKKY	8	80	529.7719107833805	1057.5292686335608	2	529.7730102539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EKTMMKKY_	REV__ENSG00000182534|ENST00000449428|MXRA7;REV__nc|ENSG00000182534|P84157-3|MXRA7;REV__nc|ENSG00000182534|P84157|MXRA7	55.50420428727701	0.5462892107279674	2				NaN	NaN	0	NaN	4375	2987	7357
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7378	22.626	NaN	28936	30	0	5812.1	0.214	+			40996	SVGQTVITK	9	83	466.7738641611151	931.5331753890302	2	466.7740783691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVGQTVITK_	ENSG00000107077|ENST00000381309|KDM4C;nc|ENSG00000293552|Q9H3R0-2|KDM4C	86.88156770896713	0.07365720931774442	2				NaN	NaN	0	NaN	4386	2990	7377
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7379	22.63	NaN	8520	30	0	1913.3	0.106	+			42804	TEAPLNPKA	9	66	470.7581604400596	939.5017679469192	2	470.7582092285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEAPLNPKA_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000446382.2_1_9:6834760-6835018:+|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000502306.1_1_5:15450853-15451165:+|nuORF;ENST00000567299.1_1_19:9629420-9629708:+|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;nc|ENSG00000204434|Q9BYX7|POTEKP	107.00750918261382	0.032051501805654005	2				NaN	NaN	0	NaN	4387	2990	7377
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7380	22.632	NaN	7177.6	30	0	1698.5	0.106				-1	 	0	54	364.188810823704	1089.544603071312	3	364.1890563964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4388	2990	7377
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7381	22.634	NaN	5943.7	30	0	838.1	0.106	+			33405	RIFAPNHVVAK	11	67	626.3701129247523	1250.7256729163046	2	626.3695678710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RIFAPNHVVAK_	ENSG00000105640|ENST00000222247|RPL18A;ENST00000600238.1_1_19:17972170-17973061:+|nuORF;ENST00000602216.1_1_19:17970765-17972392:+|nuORF	112.84542089569574	0.034131029133046886	2				NaN	NaN	0	NaN	4389	2990	7377
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7382	22.635	NaN	8493.1	30	0	1115.9	0.106				-1	 	0	87	493.6971803223721	985.3798077115442	2	493.6976318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4390	2990	7377
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7383	22.637	NaN	3311.6	30	0	417.63	0.106	+			21961	KSCFPESLK	9	64	519.7690718413513	1037.5235907495025	2	519.7698974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KSCFPESLK_	ENSG00000203972|ENST00000371197|GLYATL3	53.08895987439943	0.27122541748218487	2				NaN	NaN	0	NaN	4391	2990	7377
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7384	22.639	NaN	4356.9	30	0	504.46	0.035			+	48443	VTKRLMNC	8	66	490.75585700825025	NaN	0	490.75604248046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_VTKRLM(Oxidation (M))NC_	REV__ENSG00000177938|ENST00000317658|CAPZA3	106.41520541750704	1.7418937515398478	2				NaN	NaN	0	NaN	4392	2990	7377
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7398	22.669	NaN	68998	30	0	37486	0.214	+			32339	QTVQGTFSK	9	88	498.2610351063795	994.507517279559	2	498.2611999511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QTVQGTFSK_	ENSG00000188112|ENST00000341865|C6orf132;nc|nan|Q5T0Z8-2|C6orf132;nc|nan|Q5T0Z8-4|C6orf132	140.11223852658463	0.010427410095706195	2				NaN	NaN	0	NaN	4403	2993	7397
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7399	22.673	NaN	19737	30	0	3493.1	0.106	+			275	AANVGRVV	8	75	393.2347182650047	784.4548835968094	2	393.2350158691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AANVGRVV_	ENSG00000162981|ENST00000295092|LRATD1	79.9392285194092	0.32408006123154964	2				NaN	NaN	0	NaN	4404	2993	7397
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7400	22.674	NaN	16872	30	0	10289	0.106	+			577	ADIVLLPCIHH	11	58	410.8938759994744	1229.6597985986232	3	410.8943176269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ADIVLLPCIHH_	ENSG00000138780|ENST00000515279|GSTCD;ENST00000484843.1_1_4:106638770-106744253:+|nuORF;GSTCD|p.N625Kfs*2|1|0.33|ENSG00000138780|chr4:105845544-105845545|-/A|frameshift_variant;nc|ENSG00000138780|Q8NEC7-3|GSTCD	35.61828744233558	0.616184410043185	2				NaN	NaN	0	NaN	4405	2993	7397
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7401	22.676	NaN	13555	30	0	1841.2	0.106	+			21266	KLNEVIVNK	9	95	528.8245693479203	NaN	0	528.824462890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KLNEVIVNK_	ENSG00000140199|ENST00000354181|SLC12A6;nc|ENSG00000140199|Q9UHW9-2|SLC12A6;nc|ENSG00000140199|Q9UHW9-3|SLC12A6;nc|ENSG00000140199|Q9UHW9-4|SLC12A6;nc|ENSG00000140199|Q9UHW9-5|SLC12A6;nc|ENSG00000140199|Q9UHW9-6|SLC12A6	172.24860141594272	0.009104089201406795	2				NaN	NaN	0	NaN	4406	2993	7397
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7402	22.678	NaN	8472.2	30	0	4454	0.106				-1	 	0	40	347.54494813873595	1039.6130150164079	3	347.545166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4407	2993	7397
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7403	22.68	NaN	9956.8	30	0	2340.6	0.037	+			6399	AVVGGLDIHKK	11	65	379.5639243779508	1135.6699437340524	3	379.5643005371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AVVGGLDIHKK_	ENSG00000221823|ENST00000234310|PPP3R1	38.753607047826485	0.5749975102143227	2				NaN	NaN	0	NaN	4408	2993	7397
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7404	22.68	NaN	3552.3	30	0	765.2	0.142	+			3349	ASNCFAIRH	9	56	359.17454465879825	1074.5018045765949	3	359.17486572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_ASNC(Carbamidomethyl (C))FAIRH_	ARHGEF7-ITM2B|1|fusion;ARHGEF7-ITM2B|2|fusion;ARHGEF7-ITM2B|3|fusion;ARHGEF7-ITM2B|4|fusion;ENSG00000136156|ENST00000647800|ITM2B;ITM2B|p.R243C|1|0.39|ENSG00000136156|chr13:48261150-48261150|C/T|missense_variant;nc|ENSG00000136156|Q9Y287-2|ITM2B	62.107414245175825	0.1960472003779324	2				NaN	NaN	0	NaN	4409	2993	7397
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7416	22.708	NaN	87254	30	0	6725	0.174				-1	 	0	95	550.8058089423396	1099.597064951479	2	550.8067626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4418	2996	7415
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7417	22.711	NaN	110190	30	0	16119	0.106				-1	 	0	123	417.9061983325714	1250.6967655979142	3	417.9066467285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4419	2996	7415
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7418	22.713	NaN	50896	30	0	18675	0.106	+			5023	ATSDMDIGK	9	86	469.2177993496652	936.4210457661304	2	469.21807861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATSDMDIGK_	ENSG00000102158|ENST00000618282|MAGT1	176.44474024533739	0.0016668318535579616	2				NaN	NaN	0	NaN	4420	2996	7415
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7419	22.714	NaN	33708	30	0	13695	0.106				-1	 	0	82	490.79737108786014	979.5801892425203	2	490.79779052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4421	2996	7415
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7420	22.716	NaN	15863	30	0	2206.4	0.106				-1	RTAMRASQK	9	81	532.7860752143828	1063.5575974955655	2	532.7874145507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_RTAM(Oxidation (M))RASQK_	ENSG00000198721|ENST00000380118|ECI2;ENST00000464057.5_1_6:4126367-4135774:-|nuORF;ENST00000464583.5_1_6:4126367-4133998:-|nuORF	54.776311868738084	0.25715957988447635	2				NaN	NaN	0	NaN	4422	2996	7415
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7421	22.718	NaN	10461	30	0	1957	0.106			+	24653	LGTPHGSAM	9	61	435.70996908176596	869.405385230332	2	435.7102966308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LGTPHGSAM_	REV__tr|U7STK0|U7STK0_FUSNUUrocanatehydrataseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=hutUPE=3SV=1	65.80317337860623	0.1652391959156183	2				NaN	NaN	0	NaN	4423	2996	7415
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7422	22.72	NaN	11892	30	0	1922.1	0.034			+	37341	SLEQAISAL	9	76	466.2573688215172	930.5001847098345	2	466.2582092285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SLEQAISAL_	REV__LRRC14B|p.R273Q|1|0.11|ENSG00000185028|chr5:192356-192356|G/A|missense_variant	77.31757898189308	0.1091473830098891	2				NaN	NaN	0	NaN	4424	2996	7415
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7436	22.75	NaN	106400	30	0	35701	0.17	+			47623	VSAHDEDAR	9	72	500.2283630875217	998.4421732418434	2	500.2286071777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSAHDEDAR_	ENSG00000083857|ENST00000441802|FAT1;FAT1|p.G2934Vfs*3|2|0.37|ENSG00000083857|chr4:186617787-186617787|T/-|frameshift_variant;FAT1|p.K1225Nfs*9|1|0.03|ENSG00000083857|chr4:186636885-186636885|G/-|frameshift_variant;FAT1|p.N3847Yfs*7|1|0.03|ENSG00000083857|chr4:186601370-186601371|-/TTATA|frameshift_variant;FAT1|p.P3228Lfs*42|1|0.27|ENSG00000083857|chr4:186611556-186611556|G/-|frameshift_variant;FAT1|p.P4313Lfs*36|1|0.34|ENSG00000083857|chr4:186596602-186596602|G/-|frameshift_variant;FAT1|p.Q2933Hfs*14|1|0.33|ENSG00000083857|chr4:186617787-186617788|-/G|frameshift_variant;FAT1|p.T1364Yfs*8|1|0.23|ENSG00000083857|chr4:186636118-186636119|-/A|frameshift_variant;FAT1|p.V1878Cfs*8|2|0.22|ENSG00000083857|chr4:186620955-186620956|-/G|frameshift_variant	55.50420428727701	0.2510918378945873	2				NaN	NaN	0	NaN	4435	2999	7435
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7437	22.753	NaN	33520	30	0	10086	0.106				-1	 	0	71	560.274352238434	1118.5341515436678	2	560.275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4436	2999	7435
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7438	22.754	NaN	9142.3	30	0	1010	0.106				-1	 	0	78	487.79712303079293	973.5796931283859	2	487.7974548339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4437	2999	7435
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7439	22.756	NaN	8043	30	0	1752.7	0.106	+			9340	EILRVVIS	8	65	464.794412868552	927.574272803904	2	464.7945861816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EILRVVIS_	ENSG00000117592|ENST00000340385|PRDX6	53.351449002276354	0.5676011784961348	2				NaN	NaN	0	NaN	4438	2999	7435
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7440	22.758	NaN	20158	30	0	2045.2	0.106	+			1612	AGMALGIQK	9	80	452.74936517762023	903.4841774220405	2	452.74932861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_AGM(Oxidation (M))ALGIQK_	ENSG00000174851|ENST00000376901|YIF1A	148.20599733432147	0.007287282186870133	2				NaN	NaN	0	NaN	4439	2999	7435
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7441	22.76	NaN	5217.8	30	0	592.89	0.106	+			11522	FPEEDKKTY	9	64	578.7792291123463	1155.5439052914926	2	578.7802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FPEEDKKTY_	ENSG00000151366|ENST00000281031|NDUFC2;nc|ENSG00000151366|O95298-2|NDUFC2	143.37361013837676	0.008897369944672323	2				NaN	NaN	0	NaN	4440	2999	7435
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7442	22.762	NaN	2118.8	30	0	937.01	0.036				-1	 	0	39	349.5376069416104	1045.5909914250312	3	349.5379333496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4441	2999	7435
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7453	22.787	NaN	33585	30	0	8048	0.214				-1	 	0	89	450.76054563922895	899.5065383452579	2	450.76080322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4449	3002	7452
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7454	22.791	NaN	56289	30	0	20999	0.106				-1	 	0	94	383.208003020442	1146.602179661526	3	383.20831298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4450	3002	7452
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7455	22.793	NaN	10916	30	0	1465.7	0.106	+			33826	RQTSILIQK	9	79	543.8354513755397	NaN	0	543.83544921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RQTSILIQK_	ENSG00000164266|ENST00000296695|SPINK1	98.58198989935565	0.02429614701295995	2				NaN	NaN	0	NaN	4451	3002	7452
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7456	22.794	NaN	4083.2	30	0	468.66	0.106			+	-1	VIYHCFRRLLN	11	70	497.6064364719849	1489.7974800161549	3	497.6067199707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_VIYHC(Carbamidomethyl (C))FRRLLN_	REV__CACNA1B|p.P2044Lfs*125|1|0.41|ENSG00000148408|chr9:138120261-138120261|C/-|frameshift_variant;REV__ENSG00000148408|ENST00000371372|CACNA1B;REV__nc|ENSG00000148408|Q00975-2|CACNA1B	20.030474535948922	0.7766990143561855	2				NaN	NaN	0	NaN	4452	3002	7452
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7457	22.796	NaN	8850	30	0	1192.8	0.106	+			23799	LCMLMSSI	8	68	465.2103239641076	928.4060949950152	2	465.2105712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Oxidation (M)	_LCM(Oxidation (M))LM(Oxidation (M))SSI_	ENST00000355485.6_1_1:116234212-116234524:+|nuORF	57.452649787351945	0.526999880452039	2				NaN	NaN	0	NaN	4453	3002	7452
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7458	22.798	NaN	115400	30	0	16705	0.106				-1	 	0	106	475.75572842613536	949.4969039190707	2	475.75604248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4454	3002	7452
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7459	22.8	NaN	10233	30	0	3486.6	0.038			+	-1	YTCMDREIV	9	68	401.51016013734613	1201.5086510122385	3	401.51068115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C),Oxidation (M)	_YTC(Carbamidomethyl (C))M(Oxidation (M))DREIV_	REV__ENSG00000136155|ENST00000349847|SCEL;REV__nc|ENSG00000136155|O95171-2|SCEL;REV__nc|ENSG00000136155|O95171-3|SCEL	24.519189625965996	0.574102787014149	2				NaN	NaN	0	NaN	4455	3002	7452
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7472	22.827	NaN	68725	30	0	27425	0.214				-1	 	0	102	405.58656781914897	1213.7378740576469	3	405.5870361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4465	3005	7471
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7473	22.831	NaN	21834	30	0	4641.4	0.106	+			44138	TQCGSLIGK	9	94	482.24935959842657	962.4841662636532	2	482.2496643066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_TQC(Carbamidomethyl (C))GSLIGK_	ENSG00000169564|ENST00000303577|PCBP1	140.11223852658463	0.010427410095706195	2				NaN	NaN	0	NaN	4466	3005	7471
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7474	22.833	NaN	7757.3	30	0	786.57	0.106	+			7081	CVPAARPAPG	10	73	469.7491907028862	937.4838284725724	2	470.2481689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_CVPAARPAPG_	ENST00000605946.1_1_10:31608461-31608611:-|nuORF	31.954861631926434	0.6188749698950511	2				NaN	NaN	0	NaN	4467	3005	7471
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7475	22.835	NaN	5809.6	30	0	2038.2	0.106				-1	 	0	49	355.1862355536757	1062.5368772612271	3	355.1865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4468	3005	7471
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7476	22.836	NaN	6589.3	30	0	1123.5	0.106			+	26222	LSSKKEVV	8	69	445.2707380942926	888.5269232553852	2	445.271240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSSKKEVV_	REV__ENST00000240922.7_1_3:113437946-113438081:-|nuORF	51.33545320467046	0.5859736979383976	2				NaN	NaN	0	NaN	4469	3005	7471
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7477	22.838	NaN	4476.8	30	0	374.98	0.04			+	26190	LSRSRPAQQPR	11	63	432.5815826689036	1294.7229186069108	3	432.5818786621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSRSRPAQQPR_	REV__ENSG00000079435|ENST00000244289|LIPE;REV__nc|ENSG00000079435|Q05469-2|LIPE	32.03412808689991	0.6537793186749145	2				NaN	NaN	0	NaN	4470	3005	7471
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7478	22.839	NaN	22710	30	0	10278	0.14				-1	 	0	67	526.2633100253111	1050.512067117422	2	526.2640380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4471	3005	7471
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7491	22.868	NaN	57778	30	0	18192	0.214	+			15412	GTYHGMTLK	9	83	504.25198478740185	1006.4894166416037	2	504.2524719238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTYHGMTLK_	ENSG00000134371|ENST00000367435|CDC73	95.81516180277367	0.04847050768394289	2				NaN	NaN	0	NaN	4481	3008	7490
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7492	22.871	NaN	14446	30	0	2016.1	0.106	+			44032	TPNEERNVM	9	71	545.2524329685848	1088.4903130039695	2	545.2532958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TPNEERNVM_	ENSG00000184432|ENST00000333188|COPB2;nc|ENSG00000184432|P35606-2|COPB2	96.0336014099291	0.047854655524928534	2				NaN	NaN	0	NaN	4482	3008	7490
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7493	22.873	NaN	21639	30	0	9335.6	0.106			+	48636	VTSLNMNKIEA	11	76	407.21643888866595	1218.627487266198	3	407.5511169433594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTSLNMNKIEA_	REV__tr|U7SFW9|U7SFW9_FUSNURNApolymerasesigma-70factor,ECFsubfamilyOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02263PE=3SV=1	52.167168403610894	0.39337392184041037	2				NaN	NaN	0	NaN	4483	3008	7490
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7494	22.875	NaN	5600.1	30	0	1587.3	0.106			+	-1	EEVTCDEMK	9	67	570.7315387669078	1139.4485246006154	2	570.7329711914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_EEVTC(Carbamidomethyl (C))DEMK_	REV__tr|U7SWT0|U7SWT0_FUSNUDihydroorotatedehydrogenaseB(NAD(+)),electrontransfersubunitOS=FusobacteriumnucleatumCTI-5OX=1316586GN=pyrKPE=3SV=1	35.61828744233558	0.47037581924408073	2				NaN	NaN	0	NaN	4484	3008	7490
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7495	22.877	NaN	16985	30	0	1831.8	0.106	+			2907	ASAYSIAQK	9	84	469.7491907028862	937.4838284725724	2	469.7506408691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASAYSIAQK_	ENSG00000162813|ENST00000322067|BPNT1;nc|ENSG00000162813|O95861-2|BPNT1;nc|ENSG00000162813|O95861-4|BPNT1	150.36159442982594	0.006784847064083231	2				NaN	NaN	0	NaN	4485	3008	7490
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7496	22.878	NaN	12140	30	0	1511.1	0.106	+			13806	GQNIAVVGK	9	66	443.26182495932113	884.5090969854423	2	443.2611999511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GQNIAVVGK_	ENSG00000107036|ENST00000414202|RIC1;nc|ENSG00000107036|Q4ADV7-2|RIC1;RIC1|p.M978Ifs*8|1|0.04|ENSG00000107036|chr9:5765505-5765506|-/TTGGGAA|frameshift_variant;RIC1|p.M978Nfs*6|1|0.04|ENSG00000107036|chr9:5765503-5765504|-/A|frameshift_variant	148.04295825190792	0.0073252839830139265	2				NaN	NaN	0	NaN	4486	3008	7490
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7497	22.88	NaN	7896.4	30	0	2041.5	0.036	+			32741	RAPKDIPDPG	10	55	355.8608446025165	1064.5607044077497	3	355.8610534667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RAPKDIPDPG_	ENSG00000081052|ENST00000396625|COL4A4	27.047317107675042	0.6589519614906109	2				NaN	NaN	0	NaN	4487	3008	7490
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7512	22.912	NaN	7918.4	30	0	928.8	0.214	+			34461	RTYVGSMPGR	10	82	562.2864553589163	1122.5583577846326	2	562.2877807617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTYVGSMPGR_	ENSG00000102910|ENST00000285737|LONP2;LONP2|p.D678Efs*7|1|0.07|ENSG00000102910|chr16:48347601-48347602|-/GT|frameshift_variant;nc|ENSG00000102910|Q86WA8-2|LONP2	66.96192283764107	0.30252237217063654	2				NaN	NaN	0	NaN	4499	3011	7511
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7513	22.916	NaN	7915.7	30	0	2583.7	0.106	+			50811	YERDHAVVV	9	69	544.2796429708005	1086.544733008401	2	544.2808227539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YERDHAVVV_	ENSG00000105202|ENST00000221801|FBL;ENSG00000188573|ENST00000338333|FBLL1;FBL|p.K318Rfs*2|1|0.09|ENSG00000105202|chr19:39834553-39834553|G/-|frameshift_variant	51.52775601994872	0.28504342437107444	2				NaN	NaN	0	NaN	4500	3011	7511
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7514	22.918	NaN	12290	30	0	4678.5	0.106	+			16908	HPLEGTHEL	9	74	516.7590134719142	1031.5034740106282	2	516.75927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HPLEGTHEL_	ENSG00000122299|ENST00000355758|ZC3H7A;ENST00000571676.5_1_16:11858892-11864657:-|nuORF;ZC3H7A|p.I490Yfs*41|2|0.18|ENSG00000122299|chr16:11767471-11767471|T/-|frameshift_variant	68.78682469695295	0.14603441672067394	2				NaN	NaN	0	NaN	4501	3011	7511
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7515	22.919	NaN	5947.2	30	0	1130	0.106	+			49456	VVVVNPQTK	9	70	492.2972261551343	982.5798993770686	2	492.2976379394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVVVNPQTK_	ENSG00000177733|ENST00000314940|HNRNPA0	75.04331003522576	0.118981335847003	2				NaN	NaN	0	NaN	4502	3011	7511
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7516	22.921	NaN	7256.6	30	0	1388.6	0.106	+			11740	FSGRSGGL	8	64	390.70313383814266	779.3917147430853	2	390.70343017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FSGRSGGL_	ENST00000246174.6_2_X:101856417-101857057:+|nuORF	56.72105179125745	0.5342425954139568	2				NaN	NaN	0	NaN	4503	3011	7511
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7517	22.923	NaN	9157.9	30	0	871.13	0.035			+	17464	ICKVDQGKQ	9	72	509.77250984488575	1017.5304667565715	2	509.7718200683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ICKVDQGKQ_	REV__tr|U7SNB8|U7SNB8_FUSNUATPsynthasesubunitalphaOS=FusobacteriumnucleatumCTI-5OX=1316586GN=atpAPE=3SV=1	70.8162118820467	0.13725933411854815	2				NaN	NaN	0	NaN	4504	3011	7511
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7518	22.924	NaN	9464.1	30	0	1638.1	0.139	+			10766	FAGDDAPRA	9	70	460.21687972534346	918.4192065174869	2	460.2168273925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FAGDDAPRA_	ACTA1|p.G22D|1|0.25|ENSG00000143632|chr1:229433051-229433051|C/T|missense_variant;ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196604|ENST00000409914|POTEF;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000473016.1_1_2:74120109-74129648:+|nuORF;ENST00000477812.1_1_7:5569027-5569288:-|nuORF;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000482085.1_1_10:90708534-90712518:-|nuORF;ENST00000488967.5_1_10:90706975-90712518:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;POTEE|p.N792Kfs*34|1|0.2|ENSG00000188219|chr2:131263828-131263829|-/A|frameshift_variant	87.69643885390035	0.07135982304947239	2				NaN	NaN	0	NaN	4505	3011	7511
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7530	22.951	NaN	44283	30	0	8896.6	0.214	+			39088	SSSSVLINK	9	76	467.7623664231062	933.5101799130124	2	467.7635192871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSSSVLINK_	ENSG00000120278|ENST00000696526|PLEKHG1	180.86945649972546	0.001208757763874378	2				NaN	NaN	0	NaN	4514	3014	7529
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7531	22.955	NaN	17345	30	0	2622.6	0.106	+			36150	SEKVDRAVL	9	76	508.7899058156817	1015.5652586981635	2	508.7903137207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEKVDRAVL_	ENSG00000123240|ENST00000378747|OPTN;nc|ENSG00000123240|Q96CV9-2|OPTN;nc|ENSG00000123240|Q96CV9-3|OPTN	90.14881205920913	0.06444578693273594	2				NaN	NaN	0	NaN	4515	3014	7529
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7532	22.957	NaN	9331.4	30	0	1639.7	0.106			+	31412	QKLLFAARK	9	74	537.8420557612213	1073.6695585892426	2	537.84326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QKLLFAARK_	REV__ENSG00000130559|ENST00000389532|CAMSAP1;REV__ENST00000483991.5_1_9:138703157-138717996:-|nuORF;REV__nc|ENSG00000130559|Q5T5Y3-2|CAMSAP1;REV__nc|ENSG00000130559|Q5T5Y3-3|CAMSAP1	42.396135135203025	0.392153681582562	2				NaN	NaN	0	NaN	4516	3014	7529
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7533	22.958	NaN	7350.9	30	0	4003.8	0.106	+			32611	QYNPHVHQL	9	61	568.2850271500837	1134.5555013669673	2	568.2858276367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QYNPHVHQL_	DLG5|p.F1661Ifs*9|1|0.12|ENSG00000151208|chr10:77805849-77805850|-/C|frameshift_variant;ENSG00000151208|ENST00000372391|DLG5;ENST00000459739.5_1_10:79567604-79581271:-|nuORF;ENST00000463362.5_1_10:79552200-79579794:-|nuORF;ENST00000475613.6_1_10:79552200-79579275:-|nuORF;nc|ENSG00000151208|Q8TDM6-2|DLG5;nc|ENSG00000151208|Q8TDM6-4|DLG5;nc|ENSG00000151208|Q8TDM6-5|DLG5	124.08010499294276	0.018729767491916592	2				NaN	NaN	0	NaN	4517	3014	7529
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7534	22.96	NaN	5017.3	30	0	963.85	0.106	+			36673	SGMQNMSIHTK	11	61	411.8614356557372	1232.5624775674116	3	411.8619384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SGMQNMSIHTK_	CON__H-INV:HIT000292931;CON__P05787;CON__REFSEQ:XP_092267;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	69.2159832094219	0.24227581199444026	2				NaN	NaN	0	NaN	4518	3014	7529
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7535	22.962	NaN	8827.2	30	0	1489.1	0.032	+			61	AAASGGLLK	9	70	394.2363798156999	786.4582066981998	2	394.2367248535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AAASGGLLK_	ENSG00000175073|ENST00000310421|VCPIP1;VCPIP1|p.A460Qfs*2|1|0.36|ENSG00000175073|chr8:66665582-66665582|T/-|frameshift_variant;VCPIP1|p.K1108Nfs*37|1|0.15|ENSG00000175073|chr8:66634846-66634846|T/-|frameshift_variant	84.9155231211612	0.07920012719736333	2				NaN	NaN	0	NaN	4519	3014	7529
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7536	22.962	NaN	2434.7	30	0	253.57	0.14			+	-1	LCCRLPLL	8	58	522.787325266814	1043.560097600428	2	522.7882690429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C)	_LC(Carbamidomethyl (C))C(Carbamidomethyl (C))RLPLL_	REV__ENST00000398958.6_1_1:28865070-28865289:+|nuORF	28.2542754592877	0.7411748056684583	2				NaN	NaN	0	NaN	4520	3014	7529
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7548	22.99	NaN	31249	30	0	4674.4	0.214	+			35163	SAIDSVNATSK	11	85	546.7795693315497	1091.5445857298994	2	546.7804565429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAIDSVNATSK_	ENSG00000111641|ENST00000322166|NOP2;ENST00000537708.1_1_12:6669555-6669804:-|nuORF;ENST00000544630.1_1_12:6669555-6669953:-|nuORF;nc|ENSG00000111641|P46087-2|NOP2;nc|ENSG00000111641|P46087-3|NOP2;nc|ENSG00000111641|P46087-4|NOP2	215.71603211341287	2.0157296340413544E-12	2				NaN	NaN	0	NaN	4529	3017	7547
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7549	22.994	NaN	54144	30	0	7540.3	0.106	+			23086	KVVDSLYNK	9	89	533.2996569371352	1064.5847609410703	2	533.3008422851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVVDSLYNK_	ENSG00000108671|ENST00000261712|PSMD11;ENST00000585265.1_1_17:30807457-30807646:+|nuORF;nc|ENSG00000108671|O00231-2|PSMD11	214.23057602635166	3.58823238688865E-08	2				NaN	NaN	0	NaN	4530	3017	7547
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7550	22.996	NaN	20818	30	0	3437.9	0.106	+			33093	RELDGRTL	8	76	480.26665618630875	958.5187594394175	2	480.266845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RELDGRTL_	ENSG00000112081|ENST00000373715|SRSF3;nc|ENSG00000112081|P84103-2|SRSF3	79.71258880314673	0.32596852995588826	2				NaN	NaN	0	NaN	4531	3017	7547
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7551	22.997	NaN	11074	30	0	944.32	0.106	+			44114	TPYEGQRSY	9	76	550.7533926073523	1099.4922322815046	2	550.7542724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TPYEGQRSY_	ENSG00000005007|ENST00000262803|UPF1;nc|ENSG00000005007|Q92900|UPF1	138.06239232086	0.011389075116295402	2				NaN	NaN	0	NaN	4532	3017	7547
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7552	22.999	NaN	11304	30	0	1168	0.106				-1	 	0	69	485.28932338366315	968.5640938341263	2	485.2895812988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4533	3017	7547
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7553	23.001	NaN	4618.8	30	0	1235	0.106	+			14634	GTGSAIPMK	9	64	431.22780250763356	860.4410520820671	2	431.2283630371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTGSAIPMK_	ENSG00000006744|ENST00000338034|ELAC2;ENST00000480891.5_1_17:12896137-12909314:-|nuORF;ENST00000484122.5_1_17:12899737-12920449:-|nuORF;nc|ENSG00000006744|Q9BQ52-2|ELAC2;nc|ENSG00000006744|Q9BQ52-3|ELAC2;nc|ENSG00000006744|Q9BQ52-4|ELAC2	37.81151784470057	0.4459294069877048	2				NaN	NaN	0	NaN	4534	3017	7547
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7554	23.003	NaN	7587.4	30	0	1928.1	0.033				-1	MVNSSGRA	8	61	419.1980010287199	NaN	0	419.1979675292969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_M(Oxidation (M))VNSSGRA_	ENSG00000196090|ENST00000373187|PTPRT;nc|ENSG00000196090|O14522-1|PTPRT;PTPRT|p.P1075Rfs*6|6|0.15|ENSG00000196090|chr20:42110363-42110363|G/-|frameshift_variant;PTPRT|p.S1349Pfs*31|1|0.6|ENSG00000196090|chr20:42084774-42084774|G/-|frameshift_variant	30.503639358989545	1.7418937515398478	2				NaN	NaN	0	NaN	4535	3017	7547
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7566	23.028	NaN	23532	30	0	4202.8	0.214	+			19897	KEFDGKSL	8	80	462.2448796656269	922.4752063980538	2	462.2449645996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEFDGKSL_	ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;ENST00000517330.1_1_5:77337712-77337985:-|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P;nc|ENSG00000205940|Q58FF8|HSP90AB2P;nc|ENSG00000282100|Q58FF6|HSP90AB4P	148.98678547993487	0.23009633913008076	2				NaN	NaN	0	NaN	4544	3020	7565
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7567	23.032	NaN	7629.6	30	0	1168.8	0.106	+			34332	RTPAAVREL	9	72	506.7980626793404	1011.5815724254808	2	506.7981872558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RTPAAVREL_	ENSG00000136938|ENST00000339399|ANP32B;nc|ENSG00000136938|Q92688-2|ANP32B	58.22992032128504	0.22837015374068087	2				NaN	NaN	0	NaN	4545	3020	7565
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7568	23.034	NaN	15307	30	0	7430.8	0.106				-1	 	0	59	411.89295689578967	1232.657041287569	3	411.893310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4546	3020	7565
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7569	23.036	NaN	9045.5	30	0	1081.3	0.106	+			2855	ASANLGGVPSK	11	68	500.7743354625762	999.5341179919524	2	500.7747802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASANLGGVPSK_	ENSG00000198843|ENST00000471696|SELENOT;ENST00000471696.5_2_3:150321089-150340178:+|nuORF;ENST00000485923.1_1_3:150321131-150321287:+|nuORF	100.08592035916087	0.060509483168783906	2				NaN	NaN	0	NaN	4547	3020	7565
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7570	23.038	NaN	4588.1	30	0	924.69	0.106				-1	 	0	62	504.2974143132154	1006.5802756932309	2	504.2975769042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4548	3020	7565
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7571	23.039	NaN	4750.7	30	0	1444.6	0.035	+			46861	VIKGSILQK	9	35	329.2180823570184	984.6324176712551	3	329.2182922363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VIKGSILQK_	ENSG00000070785|ENST00000360403|EIF2B3;ENST00000480675.5_1_1:45390817-45407328:-|nuORF;nc|ENSG00000070785|Q9NR50-2|EIF2B3;nc|ENSG00000070785|Q9NR50-3|EIF2B3	21.9598887501803	0.5980208138527809	2				NaN	NaN	0	NaN	4549	3020	7565
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7572	23.04	NaN	2008.4	30	0	167.88	0.142	+			10427	EVIVGADKYH	10	47	377.5326952091766	1129.5762562277298	3	377.5328674316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EVIVGADKYH_	TK1|p.G176V|1|0.23|ENSG00000167900|chr17:78174937-78174937|C/A|missense_variant	35.15202426646627	0.5927656479315102	2				NaN	NaN	0	NaN	4550	3020	7565
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7587	23.073	NaN	49661	30	0	22489	0.214				-1	 	0	92	466.75561278020206	931.4966726272041	2	466.7558288574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4562	3023	7586
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7588	23.077	NaN	38595	30	0	13145	0.106	+			45295	TVSADPVVK	9	81	458.2602899840396	914.5060270348793	2	458.2607727050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVSADPVVK_	ENSG00000136051|ENST00000332180|WASHC4	87.69643885390035	0.07135982304947239	2				NaN	NaN	0	NaN	4563	3023	7586
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7589	23.079	NaN	11620	30	0	1779.9	0.106			+	50956	YIEYIAGI	8	81	471.2537543672731	NaN	0	471.2524108886719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YIEYIAGI_	REV__tr|U7SLS3|U7SLS3_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01877PE=4SV=1	62.97842346883844	1.7418937515398478	2				NaN	NaN	0	NaN	4564	3023	7586
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7590	23.081	NaN	8726.2	30	0	3961.4	0.106			+	43309	TFVPREPSQ	9	49	354.1854605593492	1059.5345522782477	3	354.1855773925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TFVPREPSQ_	REV__ENSG00000163710|ENST00000295992|PCOLCE2;REV__ENST00000461818.5_1_3:142583306-142607807:-|nuORF;REV__ENST00000483454.1_1_3:142606498-142607765:-|nuORF;REV__ENST00000495732.5_1_3:142565552-142607807:-|nuORF;REV__PCOLCE2|p.I390Tfs*8|1|0.26|ENSG00000163710|chr3:142818414-142818414|A/-|frameshift_variant;REV__PCOLCE2|p.N190Efs*9|1|0.33|ENSG00000163710|chr3:142842933-142842934|-/G|frameshift_variant	49.536043120802724	0.308405419312776	2				NaN	NaN	0	NaN	4565	3023	7586
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7591	23.082	NaN	4513.1	30	0	360.03	0.106			+	49122	VVLQGAGCR	9	64	480.25627110796813	958.4979892827363	2	481.263916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_VVLQGAGC(Carbamidomethyl (C))R_	REV__ENST00000518563.5_3_8:42249167-42251383:+|nuORF	47.91560031466742	0.327412564698279	2				NaN	NaN	0	NaN	4566	3023	7586
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7592	23.084	NaN	2371.7	30	0	178.42	0.106	+			3662	ASYLKSQS	8	64	442.2290292027941	882.4435054723882	2	442.2292785644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASYLKSQS_	nc|ENSG00000244687|Q13404-2|UBE2V1;nc|ENSG00000244687|Q13404-7|UBE2V1	42.396135135203025	0.6414440140393314	2				NaN	NaN	0	NaN	4567	3023	7586
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7593	23.086	NaN	5057	30	0	3619.7	0.03				-1	 	0	41	323.2013497633403	644.3881465934807	2	323.20147705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4568	3023	7586
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7608	23.117	NaN	33278	30	0	13224	0.214	+			4360	ATGSVFTGK	9	74	434.231918034704	866.449283136208	2	434.23211669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATGSVFTGK_	ENSG00000126790|ENST00000247194|L3HYPDH	185.71840793949184	0.0007219834064317508	2				NaN	NaN	0	NaN	4580	3026	7607
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7609	23.12	NaN	16532	30	0	2546.3	0.106	+			4877	ATQCGSLIGK	10	73	517.7678714810365	1033.521190028873	2	517.7688598632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_ATQC(Carbamidomethyl (C))GSLIGK_	ENSG00000169564|ENST00000303577|PCBP1	122.93914200107957	0.02317863035582428	2				NaN	NaN	0	NaN	4581	3026	7607
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7610	23.122	NaN	16023	30	0	3780.1	0.106				-1	 	0	80	351.21319531822473	1050.6177565548742	3	351.2134704589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4582	3026	7607
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7611	23.124	NaN	16505	30	0	2329.3	0.106	+			48465	VTLQILRK	8	81	485.82351340953863	969.6324738858773	2	485.8241271972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTLQILRK_	ENST00000360128.10_1_8:33354209-33354789:+|nuORF	76.7741389293348	0.3504530765139327	2				NaN	NaN	0	NaN	4583	3026	7607
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7612	23.126	NaN	6711.4	30	0	585.28	0.106			+	-1	EGVLARIM	8	69	452.74936517762023	903.4841774220405	2	453.2552490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_EGVLARIM(Oxidation (M))_	REV__ESPL1|p.V228M|1|0.22|ENSG00000135476|chr12:53269624-53269624|G/A|missense_variant	50.0245360154114	0.5941082100236891	2				NaN	NaN	0	NaN	4584	3026	7607
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7613	23.128	NaN	8770.3	30	0	2200.1	0.106	+			4281	ATGGSLLSK	9	72	417.23949702374256	832.4644411142851	2	417.23992919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATGGSLLSK_	ENSG00000164542|ENST00000440378|MATCAP2;nc|ENSG00000164542|Q8NCT3-5|MATCAP2	85.86182877749512	0.07653218437724067	2				NaN	NaN	0	NaN	4585	3026	7607
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7614	23.13	NaN	8300	30	0	839.52	0.037	+			16259	HEESREYSL	9	75	575.2615801435995	1148.508607353999	2	575.2628173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HEESREYSL_	ENSG00000173821|ENST00000582970|RNF213;nc|ENSG00000173821|Q63HN8-4|RNF213;nc|ENSG00000173821|Q63HN8|RNF213;RNF213|p.C5022Lfs*7|1|0.3|ENSG00000173821|chr17:80389237-80389237|G/-|frameshift_variant;RNF213|p.P2167Lfs*64|1|0.09|ENSG00000173821|chr17:80344834-80344835|-/T|frameshift_variant;RNF213|p.Q1953Rfs*50|2|0.13|ENSG00000173821|chr17:80340219-80340219|C/-|frameshift_variant	88.17693792209575	0.07000514020414955	2				NaN	NaN	0	NaN	4586	3026	7607
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7626	23.155	NaN	79593	30	0	31493	0.214	+			51485	YVIGWVFVW	9	83	390.21141191306225	1167.6124063393868	3	390.21173095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YVIGWVFVW_	ENSG00000135124|ENST00000337233|P2RX4;ENST00000499638.6_1_12:121647946-121660004:+|nuORF;nc|ENSG00000135124|Q99571-3|P2RX4;P2RX4|p.T223Qfs*13|1|0.34|ENSG00000135124|chr12:121228783-121228783|A/-|frameshift_variant	55.50420428727701	0.2510918378945873	2				NaN	NaN	0	NaN	4595	3029	7625
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7627	23.159	NaN	22616	30	0	3644.8	0.106	+			11674	FQVLQPQVQ	9	90	362.8692293294089	1085.5858585884266	3	362.8695373535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FQVLQPQVQ_	ENSG00000198911|ENST00000361204|SREBF2;nc|ENSG00000198911|Q12772-2|SREBF2	79.45101966838831	0.09992237243120712	2				NaN	NaN	0	NaN	4596	3029	7625
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7628	23.161	NaN	17784	30	0	9337.2	0.106				-1	 	0	62	425.724048357906	849.433543782612	2	425.7243347167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4597	3029	7625
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7629	23.163	NaN	11063	30	0	1629.7	0.106	+			12688	GEKGPVKVL	9	75	463.7864702548433	925.5583875764867	2	463.7868347167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEKGPVKVL_	ENSG00000141232|ENST00000499247|TOB1;TOB1|p.F274Yfs*52|1|0.06|ENSG00000141232|chr17:50863197-50863198|-/CATGCAGT|frameshift_variant	77.31757898189308	0.1091473830098891	2				NaN	NaN	0	NaN	4598	3029	7625
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7630	23.164	NaN	38905	30	0	5177.4	0.106			+	43694	TKIGYVGNEGI	11	99	384.2080747995763	1149.602394998929	3	384.2082824707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TKIGYVGNEGI_	REV__tr|U7SYX7|U7SYX7_FUSNUD-alanyl-D-alaninecarboxypeptidase(Penicillin-bindingprotein5/6)OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00797PE=3SV=1	66.9202029811203	0.26168278700588427	2				NaN	NaN	0	NaN	4599	3029	7625
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7631	23.166	NaN	3500.9	30	0	472.56	0.106	+			50387	YAAEGQKL	8	66	440.23186121871646	878.4491695042329	2	440.2319641113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YAAEGQKL_	ENSG00000158290|ENST00000371322|CUL4B;nc|ENSG00000158290|Q13620-3|CUL4B;nc|ENSG00000158290|Q13620|CUL4B	60.97194046774394	0.49215940876911696	2				NaN	NaN	0	NaN	4600	3029	7625
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7632	23.168	NaN	42795	30	0	10122	0.034	+			5674	AVDTAYVAK	9	89	469.2528885897214	936.4912242462428	2	469.25311279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AVDTAYVAK_	ENSG00000174851|ENST00000376901|YIF1A;ENST00000376899.8_1_11:66054976-66056456:-|nuORF;YIF1A|p.R131Gfs*50|3|0.43|ENSG00000174851|chr11:66287634-66287634|G/-|frameshift_variant	148.98678547993487	0.0071052929883181565	2				NaN	NaN	0	NaN	4601	3029	7625
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7649	23.203	NaN	15754	30	0	10718	0.214	+			5810	AVIENLPKK	9	50	337.8778980517567	1010.6118647554702	3	337.87811279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVIENLPKK_	DDX10|p.I301Nfs*59|1|0.09|ENSG00000178105|chr11:108688982-108688983|-/A|frameshift_variant;ENSG00000178105|ENST00000322536|DDX10	54.776311868738084	0.25715957988447635	2				NaN	NaN	0	NaN	4615	3032	7648
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7650	23.207	NaN	18957	30	0	5162.3	0.106	+			3312	ASLTDTVNK	9	76	474.7533070562123	947.4920611792246	2	474.75341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASLTDTVNK_	ENSG00000163946|ENST00000683822|TASOR;nc|ENSG00000163946|Q9UK61-2|TASOR;nc|ENSG00000163946|Q9UK61-3|TASOR;nc|ENSG00000163946|Q9UK61-4|TASOR	172.24860141594272	0.002383092361811508	2				NaN	NaN	0	NaN	4616	3032	7648
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7651	23.209	NaN	28911	30	0	3335.3	0.106	+			47854	VSLEASDVIS	10	80	510.2666884902105	1018.5188240472211	2	510.26702880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSLEASDVIS_	ENSG00000151490|ENST00000281171|PTPRO;nc|ENSG00000151490|Q16827-2|PTPRO;nc|ENSG00000151490|Q16827-5|PTPRO	56.72105179125745	0.3956618550748046	2				NaN	NaN	0	NaN	4617	3032	7648
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7652	23.21	NaN	5949.9	30	0	1185.9	0.106				-1	 	0	58	421.2602645175735	840.505976101947	2	421.2606506347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4618	3032	7648
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7653	23.212	NaN	3146.6	30	0	639	0.106	+			41948	SVVSSVTTK	9	53	454.2580904643944	NaN	0	454.25836181640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVVSSVTTK_	ENSG00000135124|ENST00000337233|P2RX4;ENST00000499638.6_1_12:121647946-121660004:+|nuORF;nc|ENSG00000135124|Q99571-2|P2RX4;nc|ENSG00000135124|Q99571-3|P2RX4;P2RX4|p.T223Qfs*13|1|0.34|ENSG00000135124|chr12:121228783-121228783|A/-|frameshift_variant	53.08895987439943	0.18540527177656715	2				NaN	NaN	0	NaN	4619	3032	7648
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7654	23.214	NaN	31487	30	0	4429.9	0.034	+			28769	NPEHASVAM	9	79	478.2181849337243	954.4218169342486	2	478.2186584472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NPEHASVAM_	ENSG00000102317|ENST00000376759|RBM3;ENST00000466764.5_1_X:48433568-48434262:+|nuORF;ENST00000488216.5_1_X:48433568-48434199:+|nuORF;ENST00000491240.5_1_X:48433911-48434199:+|nuORF	93.19546047674547	0.05585629608842056	2				NaN	NaN	0	NaN	4620	3032	7648
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7655	23.215	NaN	3670.8	30	0	930.1	0.139			+	17772	IESPADGPK	9	57	457.23450762387347	912.454462314547	2	457.2348327636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IESPADGPK_	REV__ENSG00000129566|ENST00000262715|TEP1;REV__nc|ENSG00000129566|Q99973-2|TEP1	51.33545320467046	0.2872990594074956	2				NaN	NaN	0	NaN	4621	3032	7648
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7668	23.244	NaN	14069	30	0	1416.8	0.214	+			49730	VYNNNSSRF	9	80	550.7591558512732	1099.5037587693464	2	550.7601318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYNNNSSRF_	ENSG00000145555|ENST00000513610|MYO10;MYO10|p.G1223Rfs*28|1|0.25|ENSG00000145555|chr5:16694504-16694505|-/T|frameshift_variant;MYO10|p.I417Tfs*39|1|0.05|ENSG00000145555|chr5:16764326-16764327|-/ACAAATCTCTG|frameshift_variant;MYO10|p.N507Qfs*30|1|0.11|ENSG00000145555|chr5:16762613-16762614|-/TG|frameshift_variant;MYO10|p.S468Ffs*8|1|0.05|ENSG00000145555|chr5:16763679-16763680|-/A|frameshift_variant	117.81106730687013	0.02252488733980868	2				NaN	NaN	0	NaN	4631	3035	7667
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7669	23.247	NaN	8978.6	30	0	1189.7	0.106			+	26513	LTPLARPD	8	66	441.755246193984	881.4959394547681	2	441.75567626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LTPLARPD_	REV__nc|ENSG00000105220|P06744-2|GPI	57.81127852772723	0.5234495074909924	2				NaN	NaN	0	NaN	4632	3035	7667
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7670	23.249	NaN	8181.5	30	0	1531.8	0.106				-1	 	0	70	589.5940629473264	1765.760359442179	3	589.5949096679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4633	3035	7667
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7671	23.251	NaN	11285	30	0	2169.9	0.106	+			345	AAQDSTDLVAK	11	72	559.787360928637	1117.5601689240739	2	559.78857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AAQDSTDLVAK_	ENSG00000120438|ENST00000321394|TCP1;ENST00000546204.1_1_6:160200657-160201127:-|nuORF	96.75553188499661	0.07111942461817355	2				NaN	NaN	0	NaN	4634	3035	7667
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7672	23.253	NaN	4652	30	0	1072.7	0.106	+			40105	STNYNPSLK	9	69	512.2578261958488	1022.5010994584976	2	512.2589111328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STNYNPSLK_	nc|ENSG00000211956|P06331|IGHV4-34;nc|ENSG00000211970|A0A0C4DH41|IGHV4-61;nc|ENSG00000224373|P01825|IGHV4-59;nc|ENSG00000276775|A0A075B6R2|IGHV4-4	77.53327743719008	0.1082147015697554	2				NaN	NaN	0	NaN	4635	3035	7667
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7673	23.255	NaN	2739.5	30	0	252.09	0.034	+			12811	GEMRLFIV	8	64	482.7689659371898	NaN	0	482.76898193359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GEMRLFIV_	ENST00000548674.5_1_12:57881816-57882819:+|nuORF	38.80614096846853	1.7418937515398478	2				NaN	NaN	0	NaN	4636	3035	7667
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7674	23.255	NaN	10400	30	0	2174.7	0.143				-1	TVEIMTVFL	9	63	356.86058453838615	1067.5599242153585	3	356.8608703613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_TVEIM(Oxidation (M))TVFL_	ENST00000369838.5_1_6:80383496-80406256:+|nuORF;SH3BGRL2|p.P55Rfs*41|2|0.28|ENSG00000198478|chr6:79673727-79673727|C/-|frameshift_variant	25.57405402267927	0.5642445186134241	2				NaN	NaN	0	NaN	4637	3035	7667
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7688	23.287	NaN	12063	30	0	1310.8	0.214	+			30559	QALRFVIQGA	10	79	551.8230223698649	1101.6314918065298	2	551.823974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QALRFVIQGA_	ENSG00000089154|ENST00000300648|GCN1	64.20726635412375	0.3275756395432415	2				NaN	NaN	0	NaN	4648	3038	7687
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7689	23.291	NaN	7938.7	30	0	970.63	0.106	+			34624	RVQDYIQSK	9	79	568.8058497744723	1135.5971466157446	2	568.8068237304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RVQDYIQSK_	ENSG00000123836|ENST00000367080|PFKFB2;ENST00000411990.6_1_1:207235951-207252361:+|nuORF;nc|ENSG00000123836|O60825-2|PFKFB2	160.8219353732433	0.004346709298329381	2				NaN	NaN	0	NaN	4649	3038	7687
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7690	23.293	NaN	12769	30	0	3268.6	0.106				-1	 	0	57	402.22592149184766	1203.655935075743	3	402.226318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4650	3038	7687
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7691	23.294	NaN	7576.2	30	0	2844.9	0.106	+			4374	ATGTSILK	8	54	395.7365993398055	789.458645746411	2	395.7368469238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATGTSILK_	ENSG00000157637|ENST00000374759|SLC38A10	66.42927471994793	0.4381325844043345	2				NaN	NaN	0	NaN	4651	3038	7687
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7692	23.296	NaN	15963	30	0	3095.7	0.106	+			35029	SADDRCKVL	9	71	503.75238470816015	1005.4902164831203	2	503.7527160644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SADDRCKVL_	ENSG00000111605|ENST00000435070|CPSF6;nc|ENSG00000111605|Q16630-2|CPSF6;nc|ENSG00000111605|Q16630-3|CPSF6	80.45461616416974	0.09558281504443908	2				NaN	NaN	0	NaN	4652	3038	7687
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7693	23.298	NaN	6883.9	30	0	750.63	0.037			+	24497	LGHRGRSKAR	10	57	379.89446303365	1136.66155970115	3	379.8960876464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LGHRGRSKAR_	REV__ENSG00000122741|ENST00000377724|DCAF10;REV__nc|ENSG00000122741|Q5QP82-2|DCAF10	27.047317107675042	0.6589519614906109	2				NaN	NaN	0	NaN	4653	3038	7687
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7694	23.299	NaN	3381.7	30	0	429.34	0.14			+	20047	KEKAVSTDL	9	62	495.7764008197575	989.538248706315	2	495.77667236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KEKAVSTDL_	REV__ENSG00000174718|ENST00000312561|RESF1	82.24051045832904	0.08786059719216216	2				NaN	NaN	0	NaN	4654	3038	7687
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7711	23.334	NaN	6140.4	30	0	1422.7	0.214	+			22429	KTLDAEVVEK	10	77	566.3160485407153	1130.6175441482305	2	566.3170776367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTLDAEVVEK_	ENSG00000185049|ENST00000382882|NELFA;ENST00000463820.5_1_4:1985048-1993691:-|nuORF;ENST00000467661.5_1_4:1985048-1988196:-|nuORF;nc|ENSG00000185049|Q9H3P2-7|NELFA;NELFA|p.P411Rfs*67|1|0.23|ENSG00000185049|chr4:1983918-1983918|G/-|frameshift_variant	147.30332882356183	0.008974348998861759	2				NaN	NaN	0	NaN	4668	3041	7710
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7712	23.337	NaN	9876.6	30	0	2093.3	0.106	+			38635	SSHMVTFEK	9	72	533.2548656606297	1064.4951783880592	2	533.256103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSHMVTFEK_	ENST00000517402.1_1_7:27222251-27222365:-|nuORF	109.47833844074708	0.029530294723441826	2				NaN	NaN	0	NaN	4669	3041	7710
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7713	23.339	NaN	17972	30	0	5685.6	0.106	+			39174	SSYLQIHQK	9	66	368.53220475975877	1102.5747848794763	3	368.5330810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSYLQIHQK_	ENSG00000167380|ENST00000337433|ZNF226;ENST00000588883.5_1_19:44679604-44681824:+|nuORF	39.252832667884924	0.4290233611298554	2				NaN	NaN	0	NaN	4670	3041	7710
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7714	23.341	NaN	6077.2	30	0	705.49	0.106			+	8138	EAAARVKV	8	64	422.25547206688094	842.4963912005619	2	422.25604248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EAAARVKV_	REV__ENST00000469819.5_1_22:38453534-38461185:+|nuORF	82.30502934623384	0.30436709589983096	2				NaN	NaN	0	NaN	4671	3041	7710
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7715	23.343	NaN	8133.8	30	0	2158.2	0.106	+			50115	WHFILELL	8	61	357.54003823383016	1069.5982853016906	3	357.54150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_WHFILELL_	ENSG00000105722|ENST00000222329|ERF;ENSG00000117036|ENST00000368192|ETV3;ENSG00000253831|ENST00000454449|ETV3L;ENSG00000268041|ENST00000597630|ERFL;ENST00000460850.1_1_1:157105261-157106150:-|nuORF;ENST00000596818.1_1_19:42754481-42759151:-|nuORF;ERF|p.G240Vfs*31|1|0.3|ENSG00000105722|chr19:42249393-42249393|C/-|frameshift_variant;ERF|p.G299Efs*12|1|0.23|ENSG00000105722|chr19:42249216-42249216|C/-|frameshift_variant;ERF|p.L525Sfs*6|3|0.27|ENSG00000105722|chr19:42248543-42248543|C/-|frameshift_variant;nc|ENSG00000117036|P41162-2|ETV3	38.80614096846853	0.6637206697844082	2				NaN	NaN	0	NaN	4672	3041	7710
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7716	23.345	NaN	6307.5	30	0	814.17	0.035	+			35666	SDCGPRVLI	9	65	508.7617581268812	NaN	0	508.7618103027344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_SDC(Carbamidomethyl (C))GPRVLI_	ENSG00000073146|ENST00000262794|MOV10L1;nc|ENSG00000073146|Q9BXT6-4|MOV10L1;nc|ENSG00000073146|Q9BXT6-5|MOV10L1	45.97224482568171	0.23445038899310136	2				NaN	NaN	0	NaN	4673	3041	7710
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7717	23.345	NaN	2852.2	30	0	292.36	0.141	+			18311	IPTHVRAQY	9	64	542.798022280702	1083.5814916282038	2	542.7994995117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IPTHVRAQY_	ENSG00000243709|ENST00000272134|LEFTY1	88.17693792209575	0.07000514020414955	2				NaN	NaN	0	NaN	4674	3041	7710
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7732	23.379	NaN	51919	30	0	18744	0.214				-1	 	0	76	458.7762209784885	915.537889023777	2	458.776611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4686	3044	7731
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7733	23.382	NaN	10582	30	0	1995.5	0.106	+			40265	STSPSVALSK	10	65	488.76859371592536	975.5226344986507	2	488.7690124511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STSPSVALSK_	BCOR|p.K1061Sfs*52|1|0.28|ENSG00000183337|chrX:40071029-40071029|T/-|frameshift_variant;BCOR|p.K839Qfs*5|1|0.26|ENSG00000183337|chrX:40072831-40072832|-/G|frameshift_variant;BCOR|p.K839Sfs*17|1|0.41|ENSG00000183337|chrX:40072832-40072832|G/-|frameshift_variant;BCOR|p.L1646Sfs*28|1|0.06|ENSG00000183337|chrX:40053926-40053926|G/-|frameshift_variant;BCOR|p.L487Hfs*13|1|0.67|ENSG00000183337|chrX:40073886-40073887|-/GTGT|frameshift_variant;BCOR|p.N529Tfs*60|1|0.51|ENSG00000183337|chrX:40073760-40073760|T/-|frameshift_variant;BCOR|p.P1621Qfs*53|2|0.52|ENSG00000183337|chrX:40054000-40054000|G/-|frameshift_variant;BCOR|p.R1215Kfs*30|1|0.14|ENSG00000183337|chrX:40063811-40063812|-/T|frameshift_variant;ENSG00000183337|ENST00000378444|BCOR;ENST00000490976.5_1_X:39931586-39937182:-|nuORF;nc|ENSG00000183337|Q6W2J9-2|BCOR;nc|ENSG00000183337|Q6W2J9-3|BCOR;nc|ENSG00000183337|Q6W2J9-4|BCOR	106.68306549817024	0.05784995512091477	2				NaN	NaN	0	NaN	4687	3044	7731
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7734	23.384	NaN	6635.6	30	0	602.44	0.106	+			44295	TSASRALGGPA	11	72	494.2649404037983	986.5153278743966	2	494.2650146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TSASRALGGPA_	ENST00000468377.1_1_3:128208233-128208692:+|nuORF;ENST00000473958.1_1_3:128208233-128208692:+|nuORF	54.722347961057174	0.3705654281804646	2				NaN	NaN	0	NaN	4688	3044	7731
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7735	23.386	NaN	9167.6	30	0	1569.6	0.106				-1	 	0	64	485.76873244396126	969.5229119547225	2	485.7692565917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4689	3044	7731
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7736	23.388	NaN	5572.9	30	0	1057.2	0.106				-1	 	0	63	449.2606525179664	896.5067521027328	2	449.2608947753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4690	3044	7731
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7737	23.39	NaN	6428.2	30	0	847.69	0.035	+			40150	STQNGPVFAK	10	61	524.7752341495285	NaN	0	524.774658203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STQNGPVFAK_	ENSG00000099942|ENST00000354336|CRKL	106.68306549817024	0.010395786232963562	2				NaN	NaN	0	NaN	4691	3044	7731
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7738	23.39	NaN	6100.4	30	0	1148.6	0.145	+			33452	RINVPMVRK	9	52	371.561456901711	1111.662541305333	3	371.5626220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RINVPMVRK_	DLC1|p.Q1096Sfs*33|1|0.29|ENSG00000164741|chr8:13095127-13095127|G/-|frameshift_variant;DLC1|p.S830Rfs*7|1|0.33|ENSG00000164741|chr8:13099850-13099850|G/-|frameshift_variant;ENSG00000164741|ENST00000276297|DLC1;nc|ENSG00000164741|Q96QB1-1|DLC1;nc|ENSG00000164741|Q96QB1-4|DLC1;nc|ENSG00000164741|Q96QB1-6|DLC1	42.86426827375447	0.38666266728046506	2				NaN	NaN	0	NaN	4692	3044	7731
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7755	23.427	NaN	94099	30	0	18981	0.214	+			16154	HEAERNIAL	9	98	526.7769792387046	1051.539405544209	2	526.7781372070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HEAERNIAL_	ENSG00000015568|ENST00000016946|RGPD5;ENSG00000153165|ENST00000409886|RGPD3;ENSG00000153201|ENST00000283195|RANBP2;ENSG00000169629|ENST00000302558|RGPD8;ENSG00000183054|ENST00000329516|RGPD6;ENSG00000185304|ENST00000398146|RGPD2;ENSG00000187627|ENST00000641458|RGPD1;ENSG00000196862|ENST00000408999|RGPD4;nc|ENSG00000183054|Q99666-2|RGPD5;nc|ENSG00000187627|P0DJD0|RGPD1;nc|ENSG00000196862|Q7Z3J3-2|RGPD4;RANBP2|p.A864Lfs*3|1|0.3|ENSG00000153201|chr2:108758533-108758533|G/-|frameshift_variant;RANBP2|p.C2737Vfs*35|1|0.18|ENSG00000153201|chr2:108772957-108772957|T/-|frameshift_variant;RANBP2|p.F3068Lfs*10|1|0.06|ENSG00000153201|chr2:108782692-108782692|T/-|frameshift_variant;RANBP2|p.H3114Sfs*18|1|0.33|ENSG00000153201|chr2:108782827-108782828|-/T|frameshift_variant;RANBP2|p.K1989Nfs*9|1|0.05|ENSG00000153201|chr2:108766505-108766506|-/TATCCTG|frameshift_variant;RANBP2|p.K2576Nfs*63|2|0.22|ENSG00000153201|chr2:108768262-108768262|A/-|frameshift_variant;RANBP2|p.S1486Rfs*51|1|0.05|ENSG00000153201|chr2:108764996-108764997|-/ATTTTGTATTC|frameshift_variant;RGPD2|p.F1350Lfs*25|1|0.25|ENSG00000185304|chr2:87782974-87782974|A/-|frameshift_variant;RGPD3|p.V1441*|1|0.45|ENSG00000153165|chr2:106423647-106423647|T/-|frameshift_variant;RGPD4|p.K568Nfs*33|1|0.14|ENSG00000196862|chr2:107859787-107859787|A/-|frameshift_variant	88.17693792209575	0.07000514020414955	2				NaN	NaN	0	NaN	4706	3047	7754
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7756	23.43	NaN	205230	30	0	49651	0.106				-1	 	0	107	363.5411199252497	1087.601530375949	3	363.5414123535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4707	3047	7754
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7757	23.432	NaN	17272	30	0	2583.7	0.106	+			40802	SVDVHQVYK	9	83	537.7820780874935	1073.5496032417868	2	537.7828979492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVDVHQVYK_	ENSG00000186314|ENST00000683046|PRELID2;ENST00000394450.6_1_5:145205751-145214847:-|nuORF;ENST00000515475.1_1_5:145199495-145214847:-|nuORF;nc|ENSG00000186314|Q8N945|PRELID2;PRELID2|p.N28Tfs*10|1|0.28|ENSG00000186314|chr5:145823129-145823129|G/-|frameshift_variant	107.00750918261382	0.032051501805654005	2				NaN	NaN	0	NaN	4708	3047	7754
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7758	23.434	NaN	6048.2	30	0	2115.2	0.106	+			51470	YVHDDGRVSY	10	64	605.7780341514167	1209.5415153696333	2	605.7783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YVHDDGRVSY_	ENSG00000130755|ENST00000597595|GMFG;ENST00000601731.1_1_19:39819119-39826633:-|nuORF	91.26522074875469	0.12383023862516404	2				NaN	NaN	0	NaN	4709	3047	7754
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7759	23.436	NaN	6241.1	30	0	1246.1	0.106				-1	 	0	66	581.8082815572272	1161.6020101812544	2	581.8092651367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4710	3047	7754
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7760	23.437	NaN	97723	30	0	43409	0.037				-1	 	0	77	367.53001589709686	1099.5682182914907	3	367.5304260253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4711	3047	7754
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7761	23.438	NaN	6443.9	30	0	1477	0.14				-1	 	0	66	504.2974143132154	1006.5802756932309	2	504.2979431152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4712	3047	7754
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7774	23.467	NaN	20723	30	0	5603.5	0.214	+			49362	VVSSTVVTAA	10	75	467.26557741095354	932.5166018887071	2	467.2658386230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVSSTVVTAA_	ENST00000372504.5_2_1:43314964-43315012:+|nuORF	82.24051045832904	0.17731618517892733	2				NaN	NaN	0	NaN	4722	3050	7773
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7775	23.47	NaN	43806	30	0	7427.1	0.106	+			4623	ATLNVSTTR	9	88	481.76607914460646	961.517605356013	2	481.7663879394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATLNVSTTR_	ENSG00000088448|ENST00000267339|ANKRD10;ENST00000460846.1_1_13:111557570-111567134:-|nuORF;nc|ENSG00000088448|Q9NXR5-2|ANKRD10	128.3478880297481	0.016146157547210084	2				NaN	NaN	0	NaN	4723	3050	7773
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7776	23.472	NaN	9005.7	30	0	1323.2	0.106	+			19744	KDVKVQVM	8	83	473.7726617929574	945.5307706527149	2	473.77294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KDVKVQVM_	ENSG00000131236|ENST00000372805|CAP1;ENST00000461993.1_1_1:40535258-40537202:+|nuORF;nc|ENSG00000131236|Q01518-2|CAP1	104.74654710444128	0.24806011021879068	2				NaN	NaN	0	NaN	4724	3050	7773
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7777	23.474	NaN	23880	30	0	13074	0.106				-1	 	0	61	427.2475833373661	852.4806137415322	2	427.2480773925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4725	3050	7773
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7778	23.476	NaN	7960.8	30	0	1180.6	0.106				-1	 	0	82	493.2266941019083	984.4388352706167	2	493.2271423339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4726	3050	7773
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7779	23.477	NaN	33429	30	0	24400	0.038	+			32631	QYTHKIYHL	9	70	401.54768508420375	1201.6212258528112	3	401.548583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QYTHKIYHL_	ENSG00000174238|ENST00000313486|PITPNA;ENSG00000180957|ENST00000335272|PITPNB;ENST00000460566.5_1_22:28293057-28315179:-|nuORF;ENST00000471825.1_1_22:28306950-28315179:-|nuORF;nc|ENSG00000180957|P48739-2|PITPNB;nc|ENSG00000180957|P48739-3|PITPNB	35.61828744233558	0.47037581924408073	2				NaN	NaN	0	NaN	4727	3050	7773
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7780	23.478	NaN	4018.5	30	0	326.59	0.14	+			19581	KDARKAIKE	9	61	529.8197429927808	NaN	0	529.814453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KDARKAIKE_	tr|U7T267|U7T267_FUSNUQueuinetRNA-ribosyltransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=tgtPE=3SV=1	67.49366992349736	0.1173583512313808	2				NaN	NaN	0	NaN	4728	3050	7773
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7794	23.509	NaN	64175	30	0	12207	0.192			+	36605	SGEARKSLKRK	11	99	420.5898893081826	1258.7478385247477	3	420.5903015136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SGEARKSLKRK_	REV__BRINP3|p.E623*|1|0.15|ENSG00000162670|chr1:190098452-190098453|-/A|frameshift_variant;REV__BRINP3|p.W279Cfs*28|1|0.27|ENSG00000162670|chr1:190226206-190226206|C/-|frameshift_variant;REV__ENSG00000162670|ENST00000367462|BRINP3;REV__nc|ENSG00000162670|Q76B58-2|BRINP3	35.495647763667336	0.6174708002554854	2				NaN	NaN	0	NaN	4739	3053	7793
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7795	23.512	NaN	45685	30	0	31647	0.106				-1	 	0	67	443.24261155704124	884.4706701808825	2	443.2427673339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4740	3053	7793
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7796	23.514	NaN	13010	30	0	2004.5	0.106	+			32889	RDLLNALK	8	84	471.7896501077139	941.5647472822278	2	471.7899169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RDLLNALK_	ENSG00000196620|ENST00000338206|UGT2B15;ENSG00000197888|ENST00000317746|UGT2B17	35.61828744233558	0.6843154725607303	2				NaN	NaN	0	NaN	4741	3053	7793
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7797	23.516	NaN	13880	30	0	5280	0.106			+	621	ADVIEGTLLTV	11	79	377.5469324425877	1129.6189679279632	3	377.5486145019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ADVIEGTLLTV_	REV__ENSG00000105523|ENST00000263266|FAM83E;REV__FAM83E|p.Q297Pfs*33|1|0.38|ENSG00000105523|chr19:48603780-48603781|-/G|frameshift_variant;REV__FAM83E|p.Q297Rfs*6|1|0.48|ENSG00000105523|chr19:48603781-48603781|G/-|frameshift_variant	29.550750289552195	0.6798279264880025	2				NaN	NaN	0	NaN	4742	3053	7793
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7798	23.517	NaN	5173.4	30	0	759.01	0.106				-1	SEMPADPYHV	10	72	387.8346556436062	1160.4821375310187	3	387.8350524902344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_SEM(Oxidation (M))PADPYHV_	ENSG00000124103|ENST00000371328|FAM209A;ENSG00000213714|ENST00000371325|FAM209B	40.05817265558897	0.5486090488315611	2				NaN	NaN	0	NaN	4743	3053	7793
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7799	23.519	NaN	8192.2	30	0	1853.8	0.106			+	6981	CPVRLRTY	8	73	504.27447965939416	1006.5344063855883	2	504.2740173339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_CPVRLRTY_	REV__ENST00000289228.6_1_2:98273211-98273301:-|nuORF	47.91560031466742	0.6071945918984287	2				NaN	NaN	0	NaN	4744	3053	7793
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7800	23.521	NaN	4158	30	0	382.81	0.034	+			28718	NNKLYVIG	8	67	460.762955076907	919.5113572206141	2	460.7633361816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NNKLYVIG_	ENSG00000187715|ENST00000405109|KBTBD12	28.2542754592877	0.7411748056684583	2				NaN	NaN	0	NaN	4745	3053	7793
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7813	23.549	NaN	259180	30	0	140650	0.172				-1	 	0	62	398.2211010991846	794.4276492651692	2	398.2214660644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4755	3056	7812
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7814	23.551	NaN	7484	30	0	1046.9	0.106	+			40234	STSFISSSK	9	70	472.239376894246	942.464200855292	2	472.239990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STSFISSSK_	ENSG00000159459|ENST00000290650|UBR1;nc|ENSG00000159459|Q8IWV7-2|UBR1;UBR1|p.P1614Hfs*32|1|0.22|ENSG00000159459|chr15:42952443-42952443|G/-|frameshift_variant	106.68306549817024	0.032382560583716295	2				NaN	NaN	0	NaN	4756	3056	7812
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7815	23.553	NaN	8995.4	30	0	1941.4	0.106	+			45266	TVQHGAVY	8	70	437.72406621268203	873.4335794921641	2	437.724365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVQHGAVY_	ENSG00000143751|ENST00000272091|SDE2	50.0245360154114	0.5941082100236891	2				NaN	NaN	0	NaN	4757	3056	7812
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7816	23.555	NaN	27887	30	0	8468.5	0.106	+			23197	KYADLSHNRL	10	65	406.2201780434964	1215.6387047306891	3	406.5572204589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KYADLSHNRL_	ENSG00000113643|ENST00000231572|RARS1;nc|ENSG00000113643|P54136-2|RARS1	55.721020083383095	0.4047570224426313	2				NaN	NaN	0	NaN	4758	3056	7812
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7817	23.557	NaN	7159.9	30	0	1304.8	0.106				-1	ALCPAAFRLV	10	71	373.21133736426407	1116.6121826929923	3	373.2116394042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_ALC(Carbamidomethyl (C))PAAFRLV_	ENSG00000179922|ENST00000325351|ZNF784;ENST00000591479.1_1_19:56133119-56135920:-|nuORF	36.446750945000026	0.5818864909973037	2				NaN	NaN	0	NaN	4759	3056	7812
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7818	23.559	NaN	5150	30	0	651.73	0.106	+			15973	HAIMRSPQM	9	69	535.7643076990958	1069.5140624649914	2	535.7657470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HAIMRSPQM_	CTNNB1|p.L301Hfs*16|1|0.05|ENSG00000168036|chr3:41225827-41225831|TTCAA/-|frameshift_variant;CTNNB1|p.M271Wfs*5|1|0.08|ENSG00000168036|chr3:41225733-41225733|A/-|frameshift_variant;ENSG00000168036|ENST00000349496|CTNNB1	104.0567914643314	0.03506238181059741	2				NaN	NaN	0	NaN	4760	3056	7812
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7819	23.561	NaN	5472.7	30	0	662.79	0.034	+			21599	KPKKGPAKN	9	66	484.3055116757849	966.5964704183698	2	484.3059387207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KPKKGPAKN_	ENST00000529541.1_1_11:13631944-13632271:-|nuORF	42.86426827375447	0.38666266728046506	2				NaN	NaN	0	NaN	4761	3056	7812
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7830	23.586	NaN	86447	30	0	15910	0.213				-1	 	0	86	439.252739896021	876.490926858842	2	439.2529602050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4769	3059	7829
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7831	23.589	NaN	88099	30	0	18991	0.106				-1	 	0	92	465.78413780935983	929.5537226855197	2	465.7843322753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4770	3059	7829
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7832	23.591	NaN	35482	30	0	14516	0.106	+			41383	SVMKSFIKR	9	92	365.88272464441377	1094.6263445334414	3	365.88323974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVMKSFIKR_	ENSG00000149503|ENST00000394818|INCENP;ENST00000528375.1_1_11:61905314-61909007:+|nuORF;nc|ENSG00000149503|Q9NQS7-2|INCENP	47.95952297671804	0.32689736945648856	2				NaN	NaN	0	NaN	4771	3059	7829
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7833	23.593	NaN	17211	30	0	5215.5	0.106	+			23198	KYADLSHNRL	10	67	406.2201780434964	1215.6387047306891	3	406.2193298339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KYADLSHNRL_	ENSG00000113643|ENST00000231572|RARS1;nc|ENSG00000113643|P54136-2|RARS1	68.78561909154949	0.2872414881718259	2				NaN	NaN	0	NaN	4772	3059	7829
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7834	23.595	NaN	15433	30	0	2498.5	0.106			+	44911	TVAFERGAV	9	82	475.25744299912105	948.5003330650421	2	475.25830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TVAFERGAV_	REV__ENSG00000198113|ENST00000357503|TOR4A	44.377184641726394	0.36891676396732553	2				NaN	NaN	0	NaN	4773	3059	7829
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7835	23.596	NaN	59669	30	0	10335	0.039				-1	 	0	73	427.2295143948951	1278.6667137848854	3	427.56402587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4774	3059	7829
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7836	23.597	NaN	23819	30	0	2825.4	0.14	+			34499	RVFTGVVTK	9	88	503.8051328409805	1005.595712748761	2	503.8057861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RVFTGVVTK_	CCAR1|p.E816Kfs*75|1|0.25|ENSG00000060339|chr10:68771347-68771347|A/-|frameshift_variant;CCAR1|p.Q181Kfs*2|1|0.31|ENSG00000060339|chr10:68747178-68747178|C/-|frameshift_variant;CCAR1|p.S739Vfs*11|1|0.47|ENSG00000060339|chr10:68765992-68765992|A/-|frameshift_variant;ENSG00000060339|ENST00000265872|CCAR1;nc|ENSG00000060339|Q8IX12-2|CCAR1	106.68306549817024	0.032382560583716295	2				NaN	NaN	0	NaN	4775	3059	7829
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7849	23.626	NaN	12792	30	0	1496.9	0.214	+			22125	KSPEIQRAL	9	71	521.305605899668	1040.5966588661358	2	521.3064575195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSPEIQRAL_	ENSG00000174444|ENST00000307961|RPL4;ENST00000422486.1_1_3:185135660-185136437:-|nuORF;ENST00000567229.5_1_15:66791747-66793486:-|nuORF	79.71258880314673	0.09879134589249085	2				NaN	NaN	0	NaN	4785	3062	7848
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7850	23.63	NaN	24621	30	0	7486	0.106	+			32293	QTNPTYLAK	9	81	518.2766993538585	1034.5388457745169	2	518.2772216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QTNPTYLAK_	ENSG00000140575|ENST00000268182|IQGAP1;IQGAP1|p.S1529Afs*10|1|0.15|ENSG00000140575|chr15:90492665-90492665|A/-|frameshift_variant	109.47833844074708	0.029530294723441826	2				NaN	NaN	0	NaN	4786	3062	7848
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7851	23.632	NaN	45518	30	0	4549.9	0.106			+	26012	LSKTVVLGA	9	96	444.28134106829776	886.5481292033955	2	444.281494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSKTVVLGA_	REV__chr15:53523322-53540662|232|17.27|0.17|6.68|-|0|TE_info:L1PA2,L1PA2_dup4399,L1,LINE,donor,+,53540662,53546677|WDR72,None|83;REV__L1PA3_dup1321|chr2:173527290-173533317:-|1.892281258594111|0.2637255971055219|2.84|482.0|346|3|anti-sense	58.22992032128504	0.22837015374068087	2				NaN	NaN	0	NaN	4787	3062	7848
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7852	23.634	NaN	7816.4	30	0	1204.1	0.106	+			20870	KIMSSPLSK	9	72	495.78587715933963	989.5572013854793	2	495.78619384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KIMSSPLSK_	ENSG00000037241|ENST00000265100|RPL26L1;ENSG00000161970|ENST00000648839|RPL26;ENST00000578115.1_1_17:8285406-8285628:-|nuORF;ENST00000602923.1_1_11:2356544-2356979:-|nuORF	112.10723106719422	0.02684780151337622	2				NaN	NaN	0	NaN	4788	3062	7848
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7853	23.636	NaN	5229.1	30	0	455.52	0.106	+			48089	VSTAKNLII	9	65	479.7998921177898	957.5852313023796	2	479.8001708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSTAKNLII_	tr|U7SU03|U7SU03_FUSNUDisulfideisomeraseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01050PE=4SV=1	62.107414245175825	0.1960472003779324	2				NaN	NaN	0	NaN	4789	3062	7848
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7854	23.637	NaN	5635.9	30	0	701.46	0.033	+			2834	ASAGVAVYR	9	64	447.2448888830078	892.4752248328156	2	447.2455139160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASAGVAVYR_	ENSG00000070159|ENST00000374541|PTPN3;nc|ENSG00000070159|P26045-2|PTPN3;nc|ENSG00000070159|P26045-3|PTPN3;PTPN3|p.P658Afs*20|1|0.15|ENSG00000070159|chr9:109391544-109391545|-/T|frameshift_variant	95.81516180277367	0.04847050768394289	2				NaN	NaN	0	NaN	4790	3062	7848
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7855	23.638	NaN	6712.7	30	0	2349	0.142			+	45344	TVSLLLDQEI	10	63	377.5469324425877	1129.6189679279632	3	377.8805847167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TVSLLLDQEI_	REV__nc|ENSG00000158731|Q8NGY7|OR10J6P	36.446750945000026	0.5818864909973037	2				NaN	NaN	0	NaN	4791	3062	7848
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7870	23.672	NaN	25987	30	0	11521	0.214	+			45146	TVLQSHML	8	73	464.74914471906135	927.4837365049227	2	464.7494201660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVLQSHML_	ENST00000496521.2_1_9:18795428-18796577:+|nuORF	115.45897859103373	0.24104770225811847	2				NaN	NaN	0	NaN	4803	3065	7869
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7871	23.675	NaN	73275	30	0	6409.9	0.106	+			40758	SVDKLVIQK	9	102	515.3190848215766	NaN	0	515.3189697265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVDKLVIQK_	ENST00000523612.1_1_8:142469282-142469963:+|nuORF	150.36159442982594	0.0026033977239465623	2				NaN	NaN	0	NaN	4804	3065	7869
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7872	23.677	NaN	13970	30	0	1648.9	0.106	+			4593	ATLGSGNLR	9	85	444.74927907275185	887.4840052123037	2	444.74853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATLGSGNLR_	ENSG00000114978|ENST00000396049|MOB1A;ENSG00000173542|ENST00000309395|MOB1B;ENST00000463975.1_1_2:74392309-74405801:-|nuORF;ENST00000497054.5_1_2:74386211-74405801:-|nuORF;ENST00000509041.5_1_4:71768157-71841035:+|nuORF;ENST00000511449.1_1_4:71768157-71863814:+|nuORF;MOB1B|p.A32T|1|0.31|ENSG00000173542|chr4:70958953-70958953|G/A|missense_variant;nc|ENSG00000114978|Q9H8S9-2|MOB1A;nc|ENSG00000173542|Q7L9L4-2|MOB1B	62.107414245175825	0.1960472003779324	2				NaN	NaN	0	NaN	4805	3065	7869
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7873	23.679	NaN	8941.2	30	0	2152.3	0.106	+			24913	LKPGALSNSE	10	66	508.2732423184273	1014.5319317036547	2	508.2745666503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LKPGALSNSE_	ENSG00000124356|ENST00000394070|STAMBP;nc|ENSG00000124356|O95630-2|STAMBP	46.45678178249821	0.4896490706773647	2				NaN	NaN	0	NaN	4806	3065	7869
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7874	23.681	NaN	7394.7	30	0	587.17	0.106	+			38118	SPVTETRTY	9	79	527.2636394662461	1052.5127259992921	2	527.2645263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SPVTETRTY_	ENSG00000102445|ENST00000429979|RUBCNL;ENST00000441284.5_2_13:46917522-46942212:-|nuORF;nc|ENSG00000102445|Q9H714-1|RUBCNL;nc|ENSG00000102445|Q9H714-3|RUBCNL;nc|ENSG00000102445|Q9H714-4|RUBCNL;nc|ENSG00000102445|Q9H714-6|RUBCNL	88.17693792209575	0.07000514020414955	2				NaN	NaN	0	NaN	4807	3065	7869
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7875	23.683	NaN	13151	30	0	3041.4	0.032	+			26432	LTGPPGVGK	9	65	413.2446178302905	824.474682727381	2	413.2449951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LTGPPGVGK_	ENSG00000135778|ENST00000366628|NTPCR	47.657333605630114	0.33044192980041115	2				NaN	NaN	0	NaN	4808	3065	7869
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7876	23.683	NaN	5875.5	30	0	734.89	0.139	+			19558	KCLINVSF	8	71	490.76650066930443	979.5184484054089	2	490.7672424316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_KC(Carbamidomethyl (C))LINVSF_	nc|ENSG00000280055|Q8N9X5|LINC02912	60.97194046774394	0.49215940876911696	2				NaN	NaN	0	NaN	4809	3065	7869
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7890	23.715	NaN	20755	30	0	3663.8	0.215	+			16414	HERGSLASL	9	88	485.25895577672077	968.5033586202416	2	485.25921630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HERGSLASL_	CTNND1|p.E842Kfs*10|1|0.19|ENSG00000198561|chr11:57810192-57810192|A/-|frameshift_variant;CTNND1|p.Q800Tfs*4|1|0.46|ENSG00000198561|chr11:57809427-57809428|-/A|frameshift_variant;CTNND1|p.S895Ifs*8|1|0.33|ENSG00000198561|chr11:57814353-57814354|-/A|frameshift_variant;ENSG00000198561|ENST00000399050|CTNND1;nc|ENSG00000198561|O60716-10|CTNND1;nc|ENSG00000198561|O60716-11|CTNND1;nc|ENSG00000198561|O60716-12|CTNND1;nc|ENSG00000198561|O60716-13|CTNND1;nc|ENSG00000198561|O60716-14|CTNND1;nc|ENSG00000198561|O60716-15|CTNND1;nc|ENSG00000198561|O60716-16|CTNND1;nc|ENSG00000198561|O60716-17|CTNND1;nc|ENSG00000198561|O60716-18|CTNND1;nc|ENSG00000198561|O60716-19|CTNND1;nc|ENSG00000198561|O60716-2|CTNND1;nc|ENSG00000198561|O60716-20|CTNND1;nc|ENSG00000198561|O60716-21|CTNND1;nc|ENSG00000198561|O60716-22|CTNND1;nc|ENSG00000198561|O60716-23|CTNND1;nc|ENSG00000198561|O60716-24|CTNND1;nc|ENSG00000198561|O60716-25|CTNND1;nc|ENSG00000198561|O60716-26|CTNND1;nc|ENSG00000198561|O60716-27|CTNND1;nc|ENSG00000198561|O60716-28|CTNND1;nc|ENSG00000198561|O60716-29|CTNND1;nc|ENSG00000198561|O60716-3|CTNND1;nc|ENSG00000198561|O60716-30|CTNND1;nc|ENSG00000198561|O60716-31|CTNND1;nc|ENSG00000198561|O60716-32|CTNND1;nc|ENSG00000198561|O60716-4|CTNND1;nc|ENSG00000198561|O60716-5|CTNND1;nc|ENSG00000198561|O60716-6|CTNND1;nc|ENSG00000198561|O60716-7|CTNND1;nc|ENSG00000198561|O60716-8|CTNND1;nc|ENSG00000198561|O60716-9|CTNND1	104.0567914643314	0.03506238181059741	2				NaN	NaN	0	NaN	4820	3068	7889
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7891	23.718	NaN	19405	30	0	5200.2	0.106	+			44639	TTFTKIVNK	9	63	351.20952972012685	1050.6067597605806	3	351.2098388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTFTKIVNK_	ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1670Tfs*23|1|0.29|ENSG00000174231|chr17:1659487-1659487|C/-|frameshift_variant	79.71258880314673	0.09879134589249085	2				NaN	NaN	0	NaN	4821	3068	7889
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7892	23.72	NaN	14579	30	0	3949.7	0.106	+			17845	IFNKYNKDK	9	67	390.54825080305045	1168.6229230093513	3	390.54876708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IFNKYNKDK_	CACNA2D1|p.Y629Tfs*3|1|0.3|ENSG00000153956|chr7:81984680-81984680|A/-|frameshift_variant;ENSG00000153956|ENST00000356860|CACNA2D1;ENST00000475237.5_1_7:81636985-81662181:-|nuORF;ENST00000492734.1_1_7:81641460-81667482:-|nuORF;nc|ENSG00000153956|P54289-3|CACNA2D1;nc|ENSG00000153956|P54289-4|CACNA2D1;nc|ENSG00000153956|P54289-5|CACNA2D1;nc|ENSG00000153956|P54289|CACNA2D1	38.80614096846853	0.43426287593479557	2				NaN	NaN	0	NaN	4822	3068	7889
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7893	23.722	NaN	10304	30	0	2618.2	0.106				-1	 	0	68	443.75277142435027	885.4909899155006	2	443.75323486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4823	3068	7889
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7894	23.724	NaN	4776.5	30	0	2207.8	0.106				-1	MLGKAKLLN	9	62	502.3015844278957	1002.5886159225914	2	502.3021545410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_M(Oxidation (M))LGKAKLLN_	ENSG00000131018|ENST00000367255|SYNE1;ENST00000471834.1_1_6:152657861-152688565:-|nuORF;nc|ENSG00000131018|Q8NF91-4|SYNE1;nc|ENSG00000131018|Q8NF91-7|SYNE1;SYNE1|p.A3854Lfs*20|1|0.4|ENSG00000131018|chr6:152352048-152352048|T/-|frameshift_variant;SYNE1|p.E4738Kfs*25|1|0.12|ENSG00000131018|chr6:152330474-152330474|T/-|frameshift_variant;SYNE1|p.E5862Gfs*83|1|0.12|ENSG00000131018|chr6:152300729-152300738|CCAGACTCCT/-|frameshift_variant;SYNE1|p.G6773Wfs*7|1|0.44|ENSG00000131018|chr6:152236186-152236187|-/A|frameshift_variant;SYNE1|p.K3606Sfs*5|1|0.25|ENSG00000131018|chr6:152354768-152354768|T/-|frameshift_variant;SYNE1|p.K6871Rfs*22|2|0.52|ENSG00000131018|chr6:152233881-152233881|T/-|frameshift_variant;SYNE1|p.L8283Pfs*8|1|0.19|ENSG00000131018|chr6:152148173-152148174|-/G|frameshift_variant;SYNE1|p.M5602Nfs*13|2|0.32|ENSG00000131018|chr6:152310779-152310780|-/T|frameshift_variant;SYNE1|p.V8635Sfs*12|1|0.15|ENSG00000131018|chr6:152133375-152133375|T/-|frameshift_variant	38.80614096846853	0.43426287593479557	2				NaN	NaN	0	NaN	4824	3068	7889
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7895	23.726	NaN	19023	30	0	6910.2	0.036			+	8829	EELNTRAKK	9	83	544.8082396954932	NaN	0	544.8087768554688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EELNTRAKK_	REV__nc|ENSG00000178104|Q5VU43-4|PDE4DIP	61.691277971877994	0.14210560126578747	2				NaN	NaN	0	NaN	4825	3068	7889
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7896	23.726	NaN	6732.3	30	0	1284.6	0.14	+			47452	VPVGEKTTY	9	68	497.265730906303	992.5169088794061	2	497.2664794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VPVGEKTTY_	ENSG00000163975|ENST00000296350|MELTF;ENST00000469783.1_1_3:196715998-196731024:-|nuORF	63.53385203322761	0.18415635464017938	2				NaN	NaN	0	NaN	4826	3068	7889
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7912	23.761	NaN	114120	30	0	58425	0.214				-1	 	0	93	495.771296638066	989.5280403429321	2	495.77154541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4839	3071	7911
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7913	23.765	NaN	29395	30	0	3958.7	0.106			+	1746	AIAASETLQ	9	70	452.24215924074235	902.4697655482847	2	453.24688720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AIAASETLQ_	REV__ENSG00000196712|ENST00000358273|NF1;REV__ENST00000495910.6_1_17:29490228-29576996:+|nuORF;REV__nc|ENSG00000196712|P21359-2|NF1;REV__nc|ENSG00000196712|P21359-3|NF1;REV__nc|ENSG00000196712|P21359-4|NF1;REV__nc|ENSG00000196712|P21359-5|NF1;REV__nc|ENSG00000196712|P21359-6|NF1;REV__NF1|p.D946*|1|0.2|ENSG00000196712|chr17:31229444-31229445|-/T|frameshift_variant;REV__NF1|p.F2429Qfs*7|1|0.17|ENSG00000196712|chr17:31349214-31349215|-/CAAGTAAGAATTAATT|frameshift_variant;REV__NF1|p.I679Dfs*21|1|0.37|ENSG00000196712|chr17:31226459-31226460|-/C|frameshift_variant;REV__NF1|p.K1386Rfs*20|1|0.33|ENSG00000196712|chr17:31252978-31252978|A/-|frameshift_variant;REV__NF1|p.P678Rfs*10|1|0.35|ENSG00000196712|chr17:31226460-31226460|C/-|frameshift_variant;REV__NF1|p.Y628Lfs*6|1|0.17|ENSG00000196712|chr17:31225125-31225126|-/T|frameshift_variant	37.15910966729921	0.4535818937225704	2				NaN	NaN	0	NaN	4840	3071	7911
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7914	23.767	NaN	28486	30	0	14139	0.106	+			7696	DLLNCALSLK	10	83	545.3012785299946	NaN	0	545.3013916015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DLLNCALSLK_	ENSG00000128610|ENST00000442488|FEZF1;FEZF1|p.I241Sfs*35|2|0.24|ENSG00000128610|chr7:122303717-122303717|T/-|frameshift_variant;FEZF1|p.L190Ffs*14|1|0.32|ENSG00000128610|chr7:122303871-122303872|-/G|frameshift_variant;FEZF1|p.T196Rfs*3|1|0.18|ENSG00000128610|chr7:122303852-122303852|T/-|frameshift_variant;nc|ENSG00000128610|A0PJY2-2|FEZF1;nc|ENSG00000128610|A0PJY2-3|FEZF1	98.58198989935565	0.02140828941662603	2				NaN	NaN	0	NaN	4841	3071	7911
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7915	23.769	NaN	13681	30	0	1164.5	0.106				-1	 	0	73	492.2551037150132	982.4956544968264	2	492.2554016113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4842	3071	7911
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7916	23.771	NaN	18848	30	0	3078	0.106				-1	 	0	71	436.24728188138823	870.4800108295765	2	436.2474060058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4843	3071	7911
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7917	23.772	NaN	18752	30	0	5653.7	0.037	+			31830	QPRENPFQN	9	80	565.2728765442266	1128.5312001552531	2	565.2737426757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QPRENPFQN_	ENSG00000067369|ENST00000382044|TP53BP1;ENST00000411772.5_2_15:43699583-43738985:-|nuORF;nc|ENSG00000067369|Q12888-3|TP53BP1;nc|ENSG00000067369|Q12888|TP53BP1	76.7741389293348	0.11149722112137898	2				NaN	NaN	0	NaN	4844	3071	7911
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7918	23.773	NaN	10959	30	0	7224.5	0.14	+			35342	SAPDNRPAL	9	69	470.74554928847454	939.4765456437491	2	470.7453918457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SAPDNRPAL_	ENSG00000185499|ENST00000620103|MUC1;nc|ENSG00000185499|P15941-2|MUC1;nc|ENSG00000185499|P15941-3|MUC1;nc|ENSG00000185499|P15941-4|MUC1;nc|ENSG00000185499|P15941-5|MUC1;nc|ENSG00000185499|P15941|MUC1	34.172542307311794	0.4838870758800184	2				NaN	NaN	0	NaN	4845	3071	7911
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7936	23.813	NaN	189860	30	0	66984	0.163	+			18028	IINSSITTK	9	82	488.7868021667557	975.5590514003114	2	488.7868957519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IINSSITTK_	CCT3|p.A379Lfs*9|1|0.21|ENSG00000163468|chr1:156312061-156312061|C/-|frameshift_variant;CCT3|p.K197Nfs*23|1|0.17|ENSG00000163468|chr1:156320857-156320857|T/-|frameshift_variant;CCT3|p.L350Ffs*9|1|0.49|ENSG00000163468|chr1:156312146-156312147|-/A|frameshift_variant;ENSG00000163468|ENST00000295688|CCT3;nc|ENSG00000163468|P49368-2|CCT3	154.0112374973812	0.005934173778894772	2				NaN	NaN	0	NaN	4860	3074	7935
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7937	23.815	NaN	147410	30	0	96015	0.106			+	47194	VLWAVACV	8	81	459.249866647396	916.485180361592	2	459.2501525878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_VLWAVAC(Carbamidomethyl (C))V_	REV__ENSG00000008838|ENST00000394128|MED24;REV__MED24|p.E720Gfs*14|1|0.41|ENSG00000008838|chr17:40023224-40023225|-/A|frameshift_variant;REV__MED24|p.K704Sfs*8|1|0.18|ENSG00000008838|chr17:40023272-40023272|G/-|frameshift_variant;REV__MED24|p.P805Rfs*53|1|0.29|ENSG00000008838|chr17:40022663-40022663|G/-|frameshift_variant;REV__nc|ENSG00000008838|O75448-2|MED24;REV__THRA-MED24|1|fusion	54.89457262308372	0.5523244765420926	2				NaN	NaN	0	NaN	4861	3074	7935
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7938	23.817	NaN	24378	30	0	4276.1	0.106				-1	 	0	84	500.2764536388525	998.538354344505	2	500.27685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4862	3074	7935
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7939	23.819	NaN	29737	30	0	4733.2	0.106				-1	 	0	91	515.7870505690057	1029.5595482048113	2	515.78759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4863	3074	7935
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7940	23.821	NaN	5391.2	30	0	1427.5	0.106			+	18549	ISMVHQFRL	9	53	377.5435412564985	1129.6087943696955	3	377.5436096191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ISMVHQFRL_	REV__ENSG00000124532|ENST00000378386|MRS2;REV__MRS2|p.K414Rfs*11|2|0.26|ENSG00000124532|chr6:24423599-24423599|A/-|frameshift_variant;REV__nc|ENSG00000124532|Q9HD23-2|MRS2;REV__nc|ENSG00000124532|Q9HD23-4|MRS2	26.69291269510374	0.5537881896960711	2				NaN	NaN	0	NaN	4864	3074	7935
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7941	23.823	NaN	4768.5	30	0	1316.5	0.106				-1	AVLCLSCLPP	10	43	358.1886877804959	1071.5442339416877	3	358.1890869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_AVLC(Carbamidomethyl (C))LSCLPP_	ENST00000531776.1_1_11:16810636-16810909:-|nuORF	24.519189625965996	0.6795976720565101	2				NaN	NaN	0	NaN	4865	3074	7935
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7942	23.825	NaN	4394.2	30	0	593.57	0.035	+			44977	TVCKPLISR	9	67	508.79926957689906	1015.5839862205981	2	508.7996826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TVCKPLISR_	ENSG00000176095|ENST00000321599|IP6K1;IP6K1|p.K150Efs*26|1|0.24|ENSG00000176095|chr3:49732958-49732959|TT/-|frameshift_variant	41.42661286455405	0.403525789677298	2				NaN	NaN	0	NaN	4866	3074	7935
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7957	23.856	NaN	111920	30	0	29613	0.214	+			39406	STDPSVLGK	9	103	452.24215924074235	902.4697655482847	2	452.2424011230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STDPSVLGK_	ENSG00000114315|ENST00000232424|HES1;HES1|p.Y110C|1|0.27|ENSG00000114315|chr3:194137719-194137719|A/G|missense_variant	132.757866228626	0.013877640931359021	2				NaN	NaN	0	NaN	4878	3077	7956
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7958	23.86	NaN	10136	30	0	2185.1	0.106			+	37235	SKRMQESTK	9	70	555.7819654530401	1109.5493779728802	2	555.7828979492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_SKRM(Oxidation (M))QESTK_	REV__ENST00000524669.5_1_11:57416530-57416830:-|nuORF	47.657333605630114	0.33044192980041115	2				NaN	NaN	0	NaN	4879	3077	7956
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7959	23.862	NaN	6810.3	30	0	1582.4	0.106	+			24147	LELHYQEFI	9	72	596.3046947620892	1190.5948365909783	2	596.3056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LELHYQEFI_	DSP|p.D582N|1|0.45|ENSG00000096696|chr6:7571425-7571425|G/A|missense_variant;DSP|p.Y787Lfs*2|1|0.17|ENSG00000096696|chr6:7574715-7574716|-/T|frameshift_variant;ENSG00000096696|ENST00000379802|DSP;nc|ENSG00000096696|P15924-2|DSP;nc|ENSG00000096696|P15924-3|DSP	49.536043120802724	0.308405419312776	2				NaN	NaN	0	NaN	4880	3077	7956
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7960	23.864	NaN	3449.8	30	0	443.73	0.106			+	-1	LCCKLWAQ	8	60	511.25207716229863	1020.4896013913973	2	511.25262451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_LCC(Carbamidomethyl (C))KLWAQ_	REV__ENST00000497194.6_1_11:71713256-71713580:+|nuORF	50.0245360154114	0.5941082100236891	2				NaN	NaN	0	NaN	4881	3077	7956
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7961	23.865	NaN	4179.8	30	0	427.25	0.106	+			415	AATCCSLPG	9	64	468.69871216381085	935.3828713944217	2	468.69903564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C)	_AATC(Carbamidomethyl (C))C(Carbamidomethyl (C))SLPG_	ENST00000596686.5_1_19:46273741-46282867:-|nuORF;nc|ENSG00000104936|Q09013-15|DMPK;nc|ENSG00000104936|Q09013-16|DMPK	47.91560031466742	0.327412564698279	2				NaN	NaN	0	NaN	4882	3077	7956
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7962	23.867	NaN	3391.1	30	0	404.05	0.034	+			20656	KGKQIVEY	8	57	482.7760332371195	963.5375135410391	2	482.7764892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KGKQIVEY_	ENST00000403687.7_1_2:33701482-33701566:+|nuORF	37.15910966729921	0.6739408393984688	2				NaN	NaN	0	NaN	4883	3077	7956
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7963	23.868	NaN	4315.7	30	0	875.53	0.144				-1	VTSFLVYLLPM	11	51	433.5732494801215	1297.6979190405646	3	433.5733947753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_VTSFLVYLLPM(Oxidation (M))_	NMUR2|p.F224V|1|0.05|ENSG00000132911|chr5:152404444-152404444|A/C|missense_variant	19.262678746197807	0.7802940895261122	2				NaN	NaN	0	NaN	4884	3077	7956
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7976	23.897	NaN	80324	30	0	24256	0.214				-1	 	0	76	523.7844673994899	1045.5543818657798	2	523.7852783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4894	3080	7975
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7977	23.901	NaN	10285	30	0	1246.2	0.106	+			39397	STDPAAPNLK	10	80	507.26649037047565	1012.5184278077513	2	507.2667541503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STDPAAPNLK_	ENSG00000137076|ENST00000314888|TLN1;nc|ENSG00000137076|Q9Y490-2|TLN1;TLN1|p.P1628Rfs*20|1|0.44|ENSG00000137076|chr9:35707144-35707144|G/-|frameshift_variant	93.1432384553994	0.11307820852620741	2				NaN	NaN	0	NaN	4895	3080	7975
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7978	23.903	NaN	13402	30	0	1426	0.106				-1	 	0	84	486.78932926950733	971.5641056058147	2	486.7895812988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4896	3080	7975
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7979	23.905	NaN	11098	30	0	2911.7	0.106			+	15758	GVSRITEL	8	57	437.75151926269	873.48848559218	2	438.25054931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GVSRITEL_	REV__ENSG00000149256|ENST00000278550|TENM4;REV__TENM4|p.R1963W|1|0.08|ENSG00000149256|chr11:78670458-78670458|G/A|missense_variant;REV__TENM4|p.R2689Gfs*41|1|0.3|ENSG00000149256|chr11:78658303-78658303|G/-|frameshift_variant	50.0245360154114	0.5941082100236891	2				NaN	NaN	0	NaN	4897	3080	7975
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7980	23.906	NaN	9199.3	30	0	1880.6	0.106			+	48131	VSVPQYFTNK	10	64	394.8762828793875	1181.6070192383625	3	395.2117004394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSVPQYFTNK_	REV__ENST00000521853.2_1_11:111942369-111943787:-|nuORF;REV__PIH1D2|p.I65Nfs*34|1|0.11|ENSG00000150773|chr11:112071742-112071743|-/T|frameshift_variant	30.568863376406313	0.6301935916953115	2				NaN	NaN	0	NaN	4898	3080	7975
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7981	23.908	NaN	4557.6	30	0	1084.1	0.035			+	1564	AGGKVVSKVY	10	67	504.29756056054134	1006.5805681878827	2	504.2973937988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AGGKVVSKVY_	REV__ENSG00000130396|ENST00000683244|AFDN;REV__nc|ENSG00000130396|P55196-1|AFDN;REV__nc|ENSG00000130396|P55196-2|AFDN;REV__nc|ENSG00000130396|P55196-3|AFDN;REV__nc|ENSG00000130396|P55196-5|AFDN;REV__nc|ENSG00000130396|P55196-6|AFDN;REV__nc|ENSG00000130396|P55196|AFDN	45.97224482568171	0.49411383603842696	2				NaN	NaN	0	NaN	4899	3080	7975
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7982	23.909	NaN	5706	30	0	950.03	0.14	+			37946	SPEPGQRTF	9	77	509.75087243288834	1017.4871919325767	2	509.7511291503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SPEPGQRTF_	ENSG00000156273|ENST00000286800|BACH1	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	4900	3080	7975
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7997	23.942	NaN	33155	30	0	3844.7	0.214				-1	 	0	87	516.2665431725957	1030.5185334119913	2	516.26708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4912	3083	7996
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7998	23.946	NaN	33413	30	0	6272.6	0.106				-1	 	0	85	497.8052101907687	993.5958674483375	2	497.8055725097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4913	3083	7996
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7999	23.948	NaN	10882	30	0	1973.5	0.106			+	33211	RFGTGAASLLQ	11	79	560.808182011318	1119.6018110894358	2	560.8093872070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RFGTGAASLLQ_	REV__KANSL1|p.K437Nfs*43|1|0.37|ENSG00000120071|chr17:46094680-46094680|T/-|frameshift_variant	84.81729255234993	0.11999117121320589	2				NaN	NaN	0	NaN	4914	3083	7996
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8000	23.949	NaN	18192	30	0	4601	0.106	+			41873	SVTHSVPV	8	70	413.2263722987974	824.4381916643948	2	413.2267150878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVTHSVPV_	ENST00000379598.9_1_20:3786205-3786352:+|nuORF	35.200714571348534	0.6875396545722289	2				NaN	NaN	0	NaN	4915	3083	7996
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8001	23.951	NaN	5479.2	30	0	1367.7	0.106	+			27578	MPHWVRGAL	9	64	533.7846606711094	1065.5547684090186	2	533.7858276367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MPHWVRGAL_	ENSG00000120903|ENST00000407991|CHRNA2;nc|ENSG00000120903|Q15822-2|CHRNA2	47.91560031466742	0.327412564698279	2				NaN	NaN	0	NaN	4916	3083	7996
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8002	23.953	NaN	15720	30	0	4116.6	0.037				-1	 	0	68	382.9125675559321	1145.7158732679964	3	382.9128723144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4917	3083	7996
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8003	23.954	NaN	9099.7	30	0	701.89	0.141			+	20422	KETSENRQL	9	80	552.7869217260084	1103.5592905188166	2	552.7876586914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KETSENRQL_	REV__ENSG00000163507|ENST00000295746|CIP2A;REV__nc|ENSG00000163507|Q8TCG1-2|CIP2A	43.650786325866115	0.37743712540499297	2				NaN	NaN	0	NaN	4918	3083	7996
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8016	23.983	NaN	126230	30	0	64615	0.214				-1	 	0	79	353.5096603824034	1057.5071517474103	3	353.5098876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4928	3086	8015
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8017	23.986	NaN	24841	30	0	9548.8	0.106				-1	 	0	54	356.52886946834803	1066.5647790052442	3	356.5291442871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4929	3086	8015
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8018	23.988	NaN	18362	30	0	6425.2	0.106	+			44662	TTGKQLFDHV	10	76	382.5359232479139	1144.5859403439417	3	382.5363464355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TTGKQLFDHV_	ENST00000528172.1_1_11:4232759-4233284:-|nuORF	52.936696900407355	0.4300801048568001	2				NaN	NaN	0	NaN	4930	3086	8015
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8019	23.99	NaN	22403	30	0	3445	0.106				-1	 	0	77	465.7245258276954	929.4344987221908	2	465.7247619628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4931	3086	8015
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8020	23.992	NaN	9832.1	30	0	5364.2	0.106	+			8915	EEVKDRCTL	9	71	546.7707251264517	1091.5268973197033	2	546.7716674804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EEVKDRCTL_	ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65622809-65623088:-|nuORF	65.46538089061403	0.16805504838372562	2				NaN	NaN	0	NaN	4932	3086	8015
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8021	23.994	NaN	12696	30	0	3788.4	0.037			+	11726	FSELVESEPT	10	52	379.8485037615062	1136.5236818847186	3	379.848876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FSELVESEPT_	REV__CHAF1A|p.A486Lfs*24|1|0.09|ENSG00000167670|chr19:4428742-4428742|G/-|frameshift_variant;REV__CHAF1A|p.K459Rfs*51|1|0.22|ENSG00000167670|chr19:4423867-4423867|C/-|frameshift_variant;REV__ENSG00000167670|ENST00000301280|CHAF1A;REV__nc|ENSG00000167670|Q13111-2|CHAF1A;REV__nc|ENSG00000167670|Q13111-3|CHAF1A	21.68575002086885	0.7027366847906487	2				NaN	NaN	0	NaN	4933	3086	8015
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8022	23.994	NaN	7704.9	30	0	472.62	0.141	+			10233	ETIEKELNK	9	73	552.3001199655104	1102.5856869978206	2	552.3010864257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ETIEKELNK_	ENSG00000061987|ENST00000393630|MON2;ENST00000547095.5_1_12:62864501-62986526:+|nuORF;MON2|p.A1027Vfs*94|1|0.03|ENSG00000061987|chr12:62553043-62553044|-/TTCTTTTT|frameshift_variant;MON2|p.T1274Qfs*3|1|0.36|ENSG00000061987|chr12:62560894-62560894|T/-|frameshift_variant;MON2|p.V1435Afs*17|1|0.03|ENSG00000061987|chr12:62566430-62566431|-/CATCT|frameshift_variant;nc|ENSG00000061987|Q7Z3U7-2|MON2;nc|ENSG00000061987|Q7Z3U7-5|MON2;nc|ENSG00000061987|Q7Z3U7-6|MON2	95.81516180277367	0.04847050768394289	2				NaN	NaN	0	NaN	4934	3086	8015
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8040	24.034	NaN	19715	30	0	3878.5	0.214				-1	 	0	78	408.74438805532526	815.4742231774505	2	408.7447204589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4949	3089	8039
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8041	24.038	NaN	22852	30	0	7228	0.106	+			1334	AETKGVAL	8	83	394.7288848261344	787.4432167190688	2	394.7291259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AETKGVAL_	ENSG00000126522|ENST00000304874|ASL;nc|ENSG00000126522|P04424-2|ASL;nc|ENSG00000126522|P04424-3|ASL	96.19043198914106	0.25873003980794995	2				NaN	NaN	0	NaN	4950	3089	8039
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8042	24.039	NaN	11044	30	0	1498.9	0.106	+			34892	SAAASGGLLK	10	74	437.75151926269	873.48848559218	2	437.75299072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAAASGGLLK_	ENSG00000175073|ENST00000310421|VCPIP1;VCPIP1|p.A460Qfs*2|1|0.36|ENSG00000175073|chr8:66665582-66665582|T/-|frameshift_variant;VCPIP1|p.K1108Nfs*37|1|0.15|ENSG00000175073|chr8:66634846-66634846|T/-|frameshift_variant	104.01359247289065	0.06577755598965461	2				NaN	NaN	0	NaN	4951	3089	8039
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8043	24.041	NaN	21949	30	0	2487.6	0.106				-1	 	0	98	486.8131360200645	971.6117191069291	2	486.8133850097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4952	3089	8039
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8044	24.043	NaN	14328	30	0	2548.3	0.106	+			41190	SVLDKSLTK	9	71	495.7948586479532	989.5751643627065	2	495.79498291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVLDKSLTK_	ENSG00000198265|ENST00000358691|HELZ;ENST00000578938.1_1_17:65172688-65184471:-|nuORF;HELZ|p.L1089Ffs*20|1|0.05|ENSG00000198265|chr17:67128771-67128772|-/GTTAATG|frameshift_variant;nc|ENSG00000198265|P42694-2|HELZ	120.8684288430529	0.02067403653475984	2				NaN	NaN	0	NaN	4953	3089	8039
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8045	24.045	NaN	35141	30	0	5949.9	0.035				-1	 	0	76	521.2581192064922	1040.5016854797843	2	521.2588500976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4954	3089	8039
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8046	24.046	NaN	8371.7	30	0	2448.7	0.139				-1	 	0	69	479.27158242850373	478.26430596190374	1	479.27154541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4955	3089	8039
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8058	24.073	NaN	213130	30	0	129190	0.155				-1	TRGKQNKVMWP	11	97	454.24534933674363	1359.7142186104309	3	454.24517822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_TRGKQNKVM(Oxidation (M))WP_	TUFT1|p.V176Cfs*59|1|0.36|ENSG00000143367|chr1:151569698-151569707|GACGGTGCAG/-|frameshift_variant	45.908116695636124	0.4771019740774998	2				NaN	NaN	0	NaN	4964	3092	8057
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8059	24.076	NaN	23880	30	0	6644.6	0.106	+			43957	TPEEKIREY	9	65	388.8677159086115	1163.5813183260345	3	388.8679504394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TPEEKIREY_	ENSG00000138668|ENST00000313899|HNRNPD;ENST00000514325.1_1_4:83279715-83279970:-|nuORF;nc|ENSG00000138668|Q14103-2|HNRNPD;nc|ENSG00000138668|Q14103-3|HNRNPD;nc|ENSG00000138668|Q14103-4|HNRNPD	44.377184641726394	0.36891676396732553	2				NaN	NaN	0	NaN	4965	3092	8057
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8060	24.078	NaN	12028	30	0	2897.6	0.106				-1	 	0	74	488.76855605464675	975.5225591760935	2	488.76885986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4966	3092	8057
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8061	24.08	NaN	8356.2	30	0	740.07	0.106			+	21657	KPVRKQLE	8	80	499.3106406217068	996.6067283102136	2	499.3111572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KPVRKQLE_	REV__ENSG00000162702|ENST00000367353|ZNF281;REV__nc|ENSG00000162702|Q9Y2X9-2|ZNF281	56.72105179125745	0.5342425954139568	2				NaN	NaN	0	NaN	4967	3092	8057
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8062	24.082	NaN	10017	30	0	2041.4	0.106	+			4918	ATQLLKLAHK	10	61	374.9042818351626	1121.6910161056878	3	374.9044189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATQLLKLAHK_	ENSG00000148303|ENST00000323345|RPL7A;ENST00000424559.2_1_22:19780074-19780431:+|nuORF;ENST00000434317.1_1_7:102395625-102396051:+|nuORF;ENST00000437848.1_1_1:46117146-46117242:-|nuORF;ENST00000463740.5_1_9:136215098-136217195:+|nuORF;ENST00000468834.1_1_10:33346560-33347304:-|nuORF;ENST00000473054.1_1_14:68805457-68806021:-|nuORF;ENST00000485706.5_1_9:136216467-136216912:+|nuORF;ENST00000486157.1_1_5:78825151-78825526:+|nuORF	48.601550744091256	0.46988609897316763	2				NaN	NaN	0	NaN	4968	3092	8057
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8063	24.084	NaN	8434.3	30	0	1293.4	0.106	+			10949	FDVKSGSAVHK	11	75	392.2119220527439	NaN	0	392.2120361328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FDVKSGSAVHK_	ENSG00000141076|ENST00000314423|UTP4;nc|ENSG00000141076|Q969X6-2|UTP4;nc|ENSG00000141076|Q969X6-3|UTP4	65.2775769800794	0.1821582373216811	2				NaN	NaN	0	NaN	4969	3092	8057
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8064	24.085	NaN	7360.4	30	0	1545.6	0.032	+			16953	HPPGTKSA	8	65	397.7110032380183	793.4074535428366	2	397.71124267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HPPGTKSA_	ENSG00000106948|ENST00000374088|AKNA;nc|ENSG00000106948|Q7Z591-2|AKNA;nc|ENSG00000106948|Q7Z591-5|AKNA;nc|ENSG00000106948|Q7Z591-7|AKNA;nc|ENSG00000106948|Q7Z591-8|AKNA	40.5726180659479	0.6527593143185008	2				NaN	NaN	0	NaN	4970	3092	8057
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8076	24.111	NaN	10324	30	0	2382.1	0.214	+			44901	TTYQPLSGK	9	68	497.7633508067177	993.5121486802354	2	497.7637939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTYQPLSGK_	ENSG00000128602|ENST00000249373|SMO;SMO|p.P694Lfs*82|6|0.3|ENSG00000128602|chr7:129212163-129212163|C/-|frameshift_variant	49.536043120802724	0.308405419312776	2				NaN	NaN	0	NaN	4979	3095	8075
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8077	24.115	NaN	11468	30	0	1941.1	0.106	+			29103	NTNIPIGNK	9	70	485.76881961052595	969.5230862878519	2	485.76922607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NTNIPIGNK_	ENSG00000115464|ENST00000398571|USP34;nc|ENSG00000115464|Q70CQ2-2|USP34;nc|ENSG00000115464|Q70CQ2-3|USP34;USP34|p.L2716Sfs*30|1|0.05|ENSG00000115464|chr2:61214596-61214597|-/AAGCTGA|frameshift_variant;USP34|p.L3228*|1|0.22|ENSG00000115464|chr2:61190564-61190564|A/-|frameshift_variant;USP34|p.N788Kfs*4|1|0.42|ENSG00000115464|chr2:61343951-61343952|-/T|frameshift_variant;USP34|p.N788Yfs*3|1|0.09|ENSG00000115464|chr2:61343952-61343953|TT/-|frameshift_variant	85.16082228582465	0.07850854922700509	2				NaN	NaN	0	NaN	4980	3095	8075
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8078	24.117	NaN	16226	30	0	3426.1	0.106	+			7198	DAHVDSTTY	9	70	504.7167489076954	1007.4189448821908	2	504.7172546386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DAHVDSTTY_	ENSG00000109320|ENST00000226574|NFKB1;nc|ENSG00000109320|P19838-3|NFKB1;nc|ENSG00000109320|P19838|NFKB1;NFKB1|p.I888Sfs*8|1|0.09|ENSG00000109320|chr4:102613497-102613497|A/-|frameshift_variant	55.50420428727701	0.2510918378945873	2				NaN	NaN	0	NaN	4981	3095	8075
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8079	24.118	NaN	5802.2	30	0	1146.4	0.106			+	39084	SSSSVAKLV	9	54	439.2531062871133	NaN	0	439.2529296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSSSVAKLV_	REV__TAGAP|p.F460V|1|0.23|ENSG00000164691|chr6:159036645-159036645|A/C|missense_variant	60.97194046774394	0.14517358171632622	2				NaN	NaN	0	NaN	4982	3095	8075
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8080	24.12	NaN	4400.7	30	0	513	0.106			+	41515	SVPSPLLLDR	10	70	366.21655484267217	1095.6278351282165	3	366.2170104980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVPSPLLLDR_	REV__ENSG00000251322|ENST00000262795|SHANK3;REV__ENST00000414786.6_1_22:51113069-51169737:+|nuORF;REV__nc|ENSG00000251322|Q9BYB0-3|SHANK3;REV__nc|ENSG00000251322|Q9BYB0|SHANK3	61.691277971877994	0.35045824941635534	2				NaN	NaN	0	NaN	4983	3095	8075
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8081	24.122	NaN	4652.6	30	0	541.07	0.035			+	37544	SLLTWLNDG	9	70	509.76495159603104	1017.5153502588621	2	509.7658386230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLLTWLNDG_	REV__ENSG00000171495|ENST00000399564|MROH2B;REV__nc|ENSG00000171495|Q7Z745-2|MROH2B	72.87924865735499	0.12833875048249987	2				NaN	NaN	0	NaN	4984	3095	8075
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8082	24.123	NaN	2801.5	30	0	933.06	0.142	+			34795	RYLEKNVKL	9	54	581.8504161789377	1161.6862794246754	2	581.85107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RYLEKNVKL_	ENSG00000137574|ENST00000260129|TGS1;ENST00000523948.5_1_8:56686169-56737149:+|nuORF;TGS1|p.G559Rfs*2|1|0.17|ENSG00000137574|chr8:55799039-55799040|-/A|frameshift_variant	66.96192283764107	0.15557981141143568	2				NaN	NaN	0	NaN	4985	3095	8075
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8096	24.154	NaN	10397	30	0	2104.7	0.214	+			2480	APPAWSAL	8	60	406.7187114863384	811.4228700394768	2	406.7166442871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_APPAWSAL_	COL5A1|p.K933Rfs*141|1|0.32|ENSG00000130635|chr9:134795309-134795309|C/-|frameshift_variant;COL5A1|p.P870Qfs*204|1|0.5|ENSG00000130635|chr9:134786009-134786009|C/-|frameshift_variant;COL5A1|p.P966Lfs*108|1|0.41|ENSG00000130635|chr9:134796895-134796895|C/-|frameshift_variant	46.76643321282427	0.6143254112625767	2				NaN	NaN	0	NaN	4996	3098	8095
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8097	24.158	NaN	4169.9	30	0	703.75	0.106	+			25429	LPNEGRNDY	9	72	539.2508742136143	1076.4871954940286	2	539.2520751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LPNEGRNDY_	ENSG00000062598|ENST00000290246|ELMO2;nc|ENSG00000062598|Q96JJ3-3|ELMO2	56.43379154798735	0.2433427591689151	2				NaN	NaN	0	NaN	4997	3098	8095
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8098	24.16	NaN	6957.4	30	0	1129.5	0.106	+			17125	HSPGAVSSL	9	57	427.72136295384036	853.4281729744807	2	427.7217712402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HSPGAVSSL_	ENSG00000163026|ENST00000295148|WDCP;nc|ENSG00000163026|Q9H6R7-3|WDCP	90.77665401227738	0.06267569666681755	2				NaN	NaN	0	NaN	4998	3098	8095
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8099	24.162	NaN	4960.5	30	0	505.79	0.106				-1	 	0	69	515.3183313405198	514.3110548739197	1	515.319091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4999	3098	8095
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8100	24.163	NaN	2203	30	0	568.13	0.106	+			12936	GESQVKDNTF	10	62	562.7641477413326	1123.5137425494652	2	562.7650756835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GESQVKDNTF_	ENSG00000236699|ENST00000420470|ARHGEF38	45.02220120713402	0.5028680121232791	2				NaN	NaN	0	NaN	5000	3098	8095
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8101	24.165	NaN	4139.9	30	0	1070.7	0.036	+			34221	RTETLIPEM	9	72	553.2814254237787	1104.5482979143574	2	553.28271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_RTETLIPEM(Oxidation (M))_	ENSG00000038427|ENST00000265077|VCAN;nc|ENSG00000038427|P13611-3|VCAN;nc|ENSG00000038427|P13611-5|VCAN;VCAN|p.E2431Rfs*10|1|0.16|ENSG00000038427|chr5:83540290-83540291|-/G|frameshift_variant	42.396135135203025	0.392153681582562	2				NaN	NaN	0	NaN	5001	3098	8095
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8102	24.166	NaN	3766	30	0	471.73	0.14			+	47812	VSKDRPEI	8	70	493.26845421667366	984.5223555001473	2	493.2692565917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))VSKDRPEI_	REV__ENST00000226951.10_1_4:10490183-10490225:-|nuORF	67.49366992349736	0.4277823096851425	2				NaN	NaN	0	NaN	5002	3098	8095
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8114	24.199	NaN	26715	30	0	6449.6	0.214				-1	 	0	77	537.3129526681502	1072.6113524031002	2	537.31396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5011	3101	8113
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8115	24.202	NaN	7015.9	30	0	1298	0.106			+	47965	VSNFINGK	8	59	439.7397570923786	877.4649612515573	2	439.73992919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSNFINGK_	REV__AXDND1|p.N583Vfs*2|1|0.1|ENSG00000162779|chr1:179445152-179445153|-/GTCT|frameshift_variant;REV__ENSG00000162779|ENST00000367618|AXDND1;REV__ENST00000461179.2_1_1:179339175-179437601:+|nuORF;REV__nc|ENSG00000162779|Q5T1B0-2|AXDND1	44.116797842482775	0.6307669463330267	2				NaN	NaN	0	NaN	5012	3101	8113
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8116	24.204	NaN	3393.9	30	0	464.53	0.106			+	7135	DAAVTTVKQ	9	67	466.7557338360581	931.4969147389162	2	466.75616455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DAAVTTVKQ_	REV__ENSG00000146904|ENST00000275815|EPHA1;REV__nc|ENSG00000146904|P21709-2|EPHA1;REV__nc|ENSG00000146904|P21709-3|EPHA1	37.81151784470057	0.4459294069877048	2				NaN	NaN	0	NaN	5013	3101	8113
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8117	24.206	NaN	5626.4	30	0	965.9	0.106	+			13184	GIAGSLTNK	9	59	430.74483479953517	859.4751166658704	2	430.7451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GIAGSLTNK_	ENSG00000175445|ENST00000650287|LPL	87.69643885390035	0.07135982304947239	2				NaN	NaN	0	NaN	5014	3101	8113
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8118	24.208	NaN	5766.3	30	0	802.65	0.034			+	8168	EAALGPEKK	9	69	471.7659583862252	941.5173638392504	2	471.7662658691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EAALGPEKK_	REV__ENSG00000182013|ENST00000313683|PNMA8A;REV__nc|ENSG00000182013|Q86V59-2|PNMA8A	62.107414245175825	0.1960472003779324	2				NaN	NaN	0	NaN	5015	3101	8113
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8119	24.208	NaN	1569	30	0	157.8	0.137	+			45961	VASRATVL	8	59	408.7496505546541	NaN	0	408.7500915527344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VASRATVL_	ENSG00000118705|ENST00000237530|RPN2;nc|ENSG00000118705|P04844-2|RPN2	47.91560031466742	1.7418937515398478	2				NaN	NaN	0	NaN	5016	3101	8113
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8136	24.246	NaN	150250	30	0	19376	0.214				-1	 	0	110	424.2548152828273	846.4950776324546	2	424.2552795410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5030	3104	8135
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8137	24.25	NaN	82260	30	0	20574	0.106	+			45216	TVNTSLVGK	9	94	459.76578541054323	917.5170178878865	2	459.76605224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVNTSLVGK_	CCDC66|p.A265Sfs*9|1|0.15|ENSG00000180376|chr3:56567024-56567025|-/A|frameshift_variant;CCDC66|p.T207Nfs*2|2|0.31|ENSG00000180376|chr3:56566661-56566662|-/A|frameshift_variant;CCDC66|p.V732*|1|0.25|ENSG00000180376|chr3:56617454-56617454|A/-|frameshift_variant;ENSG00000180376|ENST00000394672|CCDC66;ENST00000422788.5_1_3:56595403-56599181:+|nuORF;ENST00000469966.1_1_3:56592935-56598176:+|nuORF;ENST00000472582.5_1_3:56591255-56599181:+|nuORF;nc|ENSG00000180376|A2RUB6-2|CCDC66;nc|ENSG00000180376|A2RUB6-3|CCDC66;nc|ENSG00000180376|A2RUB6-4|CCDC66	82.83050618871818	0.08530945204495013	2				NaN	NaN	0	NaN	5031	3104	8135
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8138	24.252	NaN	171390	30	0	108070	0.106				-1	 	0	104	349.87777360790074	1046.6114914239022	3	349.8780822753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5032	3104	8135
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8139	24.254	NaN	58790	30	0	11936	0.106	+			36855	SIFKQPVTK	9	99	524.3127427833208	1046.6109326334415	2	524.3138427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SIFKQPVTK_	ENSG00000071655|ENST00000434436|MBD3;ENSG00000134046|ENST00000256429|MBD2;ENST00000590830.5_1_19:1578341-1584901:-|nuORF;nc|ENSG00000071655|O95983-2|MBD3	173.39201167336012	0.002187917786942103	2				NaN	NaN	0	NaN	5033	3104	8135
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8140	24.255	NaN	5928.1	30	0	621.57	0.106	+			43163	TETHVERVL	9	74	542.292875307156	1082.571197681112	2	542.2936401367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TETHVERVL_	ENSG00000076201|ENST00000265562|PTPN23;PTPN23|p.L1513Wfs*71|1|0.44|ENSG00000076201|chr3:47412805-47412805|G/-|frameshift_variant	45.02220120713402	0.3613509778819777	2				NaN	NaN	0	NaN	5034	3104	8135
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8141	24.257	NaN	8365.9	30	0	1246	0.036	+			20416	KETPDKVEL	9	69	529.7923112317803	1057.5700695303606	2	529.7918701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KETPDKVEL_	ENSG00000136045|ENST00000412830|PWP1;nc|ENSG00000136045|Q13610-2|PWP1;PWP1|p.R140Lfs*5|1|0.31|ENSG00000136045|chr12:107693013-107693013|G/-|frameshift_variant	120.30596017624542	0.02101454110788768	2				NaN	NaN	0	NaN	5035	3104	8135
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8142	24.258	NaN	7530.5	30	0	2820.7	0.139	+			16985	HPSGATPTL	9	60	440.729316666991	879.444080400782	2	440.7296142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HPSGATPTL_	ARID1B|p.K1095Rfs*9|1|0.39|ENSG00000049618|chr6:157181155-157181156|AA/-|frameshift_variant;ARID1B|p.P722Hfs*10|1|0.36|ENSG00000049618|chr6:157084826-157084826|C/-|frameshift_variant;ENSG00000049618|ENST00000636930|ARID1B;nc|ENSG00000049618|Q8NFD5-1|ARID1B;nc|ENSG00000049618|Q8NFD5-2|ARID1B;nc|ENSG00000049618|Q8NFD5|ARID1B	90.77665401227738	0.06267569666681755	2				NaN	NaN	0	NaN	5036	3104	8135
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8155	24.287	NaN	11336	30	0	2926.2	0.214	+			26496	LTMKVAVNK	9	95	502.30140399418843	1002.5882550551769	2	502.3017272949219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LTMKVAVNK_	ENST00000418474.1_1_2:160472985-160473165:+|nuORF	115.49404669440601	0.023927554121326553	2				NaN	NaN	0	NaN	5046	3107	8154
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8156	24.291	NaN	55818	30	0	11271	0.106				-1	 	0	96	386.5482495748589	1156.6229193247768	3	386.54864501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5047	3107	8154
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8157	24.293	NaN	13517	30	0	2271.2	0.106	+			26497	LTMKVAVNK	9	79	335.20342892208527	1002.5884573664558	3	335.2037048339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LTMKVAVNK_	ENST00000418474.1_1_2:160472985-160473165:+|nuORF	44.377184641726394	0.36891676396732553	2				NaN	NaN	0	NaN	5048	3107	8154
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8158	24.295	NaN	10710	30	0	906.39	0.106	+			8294	EAIQRTEAY	9	84	540.7691400778349	1079.5237272224697	2	540.77001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EAIQRTEAY_	ENSG00000148396|ENST00000684901|SEC16A;nc|ENSG00000148396|O15027-2|SEC16A;nc|ENSG00000148396|O15027-3|SEC16A;nc|ENSG00000148396|O15027-4|SEC16A;nc|ENSG00000148396|O15027-5|SEC16A;SEC16A|p.P2155Hfs*25|1|0.25|ENSG00000148396|chr9:136447664-136447664|G/-|frameshift_variant	158.07458414430337	0.004987072822166904	2				NaN	NaN	0	NaN	5049	3107	8154
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8159	24.297	NaN	15140	30	0	3355.2	0.106			+	-1	SCRLAPAL	8	70	444.24118606894376	886.4678192046875	2	444.24163818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_SC(Carbamidomethyl (C))RLAPAL_	REV__ENST00000521682.5_1_8:144351612-144356933:+|nuORF	57.81127852772723	0.5234495074909924	2				NaN	NaN	0	NaN	5050	3107	8154
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8160	24.298	NaN	34977	30	0	14311	0.037				-1	GSITMTCTAFG	11	95	382.5032231070934	1144.4878399214801	3	382.50347900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_GSITMTC(Carbamidomethyl (C))TAFG_	ENSG00000080854|ENST00000533871|IGSF9B;IGSF9B|p.E216Rfs*61|1|0.28|ENSG00000080854|chr11:133937409-133937409|C/-|frameshift_variant;IGSF9B|p.T1083Hfs*72|2|0.42|ENSG00000080854|chr11:133920478-133920479|-/G|frameshift_variant;IGSF9B|p.T1083Pfs*48|1|0.11|ENSG00000080854|chr11:133920479-133920479|G/-|frameshift_variant;nc|ENSG00000080854|Q9UPX0|IGSF9B	50.033510581677724	0.4206539900604183	2				NaN	NaN	0	NaN	5051	3107	8154
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8161	24.299	NaN	5096.3	30	0	1484.9	0.143				-1	ICRPWLALSL	10	48	410.23410525919786	1227.6804863777936	3	410.2343444824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_IC(Carbamidomethyl (C))RPWLALSL_	ENST00000470143.1_1_20:2633306-2634188:+|nuORF	36.446750945000026	0.5818864909973037	2				NaN	NaN	0	NaN	5052	3107	8154
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8178	24.335	NaN	365530	30	0	75219	0.147	+			10670	EYSKQMQRF	9	90	406.19687309141216	1215.5687898744366	3	406.1974792480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EYSKQMQRF_	ENSG00000116478|ENST00000373548|HDAC1;ENSG00000196591|ENST00000519065|HDAC2;ENST00000463172.5_1_1:32757770-32792715:+|nuORF;ENST00000481281.5_1_1:32757770-32793222:+|nuORF;nc|ENSG00000196591|Q92769-3|HDAC2	29.14955571784316	0.5308295550522326	2				NaN	NaN	0	NaN	5066	3110	8177
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8179	24.337	NaN	47842	30	0	4579	0.106				-1	SEGSEFLLLGM	11	78	400.19340488785633	1197.558385263769	3	400.1939392089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_SEGSEFLLLGM(Oxidation (M))_	ENSG00000184166|ENST00000641833|OR1D2	45.02220120713402	0.4892240028381124	2				NaN	NaN	0	NaN	5067	3110	8177
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8180	24.339	NaN	87515	30	0	54914	0.106				-1	 	0	93	430.2655290684431	858.5165052036862	2	430.2657470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5068	3110	8177
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8181	24.341	NaN	25782	30	0	4588.3	0.106			+	38246	SQMWFREV	8	82	541.7585211388373	1081.5024893444745	2	541.759521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SQMWFREV_	REV__ENSG00000070269|ENST00000261556|TMEM260;REV__ENST00000553335.5_1_14:57076000-57086109:+|nuORF;REV__nc|ENSG00000070269|Q9NX78-3|TMEM260	82.30502934623384	0.30436709589983096	2				NaN	NaN	0	NaN	5069	3110	8177
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8182	24.343	NaN	8954.3	30	0	987.66	0.106			+	-1	LFTGADSEMVL	11	78	599.7867705901617	1197.5589882471234	2	599.7872314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_LFTGADSEM(Oxidation (M))VL_	REV__ENSG00000104324|ENST00000220763|CPQ	37.81151784470057	0.5878881669006212	2				NaN	NaN	0	NaN	5070	3110	8177
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8183	24.345	NaN	4205.1	30	0	2557.2	0.106			+	29642	PGIDGVRLR	9	29	328.1975519360142	981.5708264082425	3	328.19781494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PGIDGVRLR_	REV__ENSG00000132000|ENST00000588872|PODNL1;REV__nc|ENSG00000132000|Q6PEZ8-2|PODNL1;REV__nc|ENSG00000132000|Q6PEZ8-3|PODNL1;REV__nc|ENSG00000132000|Q6PEZ8|PODNL1	26.69291269510374	0.5537881896960711	2				NaN	NaN	0	NaN	5071	3110	8177
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8184	24.346	NaN	3982.2	30	0	802.09	0.033			+	1588	AGKRFAMG	8	59	419.2230279590184	836.4315029848368	2	419.2234191894531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AGKRFAMG_	REV__ENST00000432615.5_1_7:158494977-158496347:-|nuORF	35.200714571348534	0.6875396545722289	2				NaN	NaN	0	NaN	5072	3110	8177
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8201	24.381	NaN	36185	30	0	4193.8	0.215	+			38203	SQFSGKITVK	10	91	547.8133521494491	1093.612151365698	2	547.8142700195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SQFSGKITVK_	ENSG00000075568|ENST00000186436|TMEM131;TMEM131|p.G555Wfs*10|1|0.32|ENSG00000075568|chr2:97812704-97812705|-/A|frameshift_variant;TMEM131|p.L1469Tfs*5|1|0.43|ENSG00000075568|chr2:97772340-97772341|-/T|frameshift_variant;TMEM131|p.L538Ffs*27|1|0.09|ENSG00000075568|chr2:97813974-97813975|-/A|frameshift_variant;TMEM131|p.N815Ifs*2|1|0.27|ENSG00000075568|chr2:97802749-97802749|T/-|frameshift_variant;TMEM131|p.N815Kfs*9|1|0.31|ENSG00000075568|chr2:97802748-97802749|-/T|frameshift_variant	166.29008070562384	0.004865026872537625	2				NaN	NaN	0	NaN	5086	3113	8200
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8202	24.385	NaN	34522	30	0	23668	0.106				-1	 	0	67	490.7792082083446	979.5438634834892	2	490.77972412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5087	3113	8200
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8203	24.387	NaN	34637	30	0	7083.2	0.106	+			10145	ESSAVGTSVI	10	95	475.24521248264926	948.4758720320986	2	475.24530029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ESSAVGTSVI_	CDH5|p.T612Sfs*143|1|0.11|ENSG00000179776|chr16:66401013-66401014|-/G|frameshift_variant;CDH5|p.Y725Lfs*30|1|0.34|ENSG00000179776|chr16:66402979-66402980|-/C|frameshift_variant;ENSG00000179776|ENST00000341529|CDH5;nc|ENSG00000179776|P33151-2|CDH5	54.776311868738084	0.41334902933431344	2				NaN	NaN	0	NaN	5088	3113	8200
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8204	24.389	NaN	12666	30	0	980.29	0.106	+			11009	FEKDVKGESL	10	80	576.3011199217594	1150.5876869103188	2	576.3012084960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FEKDVKGESL_	ENSG00000119888|ENST00000263735|EPCAM	141.91077491472637	0.010244635003291853	2				NaN	NaN	0	NaN	5089	3113	8200
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8205	24.39	NaN	16138	30	0	5054.8	0.106			+	50984	YIMSHQIFL	9	80	384.5359435229621	1150.5860011690863	3	384.5362243652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YIMSHQIFL_	REV__ENSG00000182087|ENST00000356663|TMEM259;REV__ENST00000592618.5_1_19:1010351-1011343:-|nuORF	45.9519527083369	0.35044536499095585	2				NaN	NaN	0	NaN	5090	3113	8200
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8206	24.392	NaN	12354	30	0	3102.6	0.034			+	-1	IVVCKGNK	8	74	459.2675293625175	NaN	0	459.2682800292969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_IVVC(Carbamidomethyl (C))KGNK_	REV__ENSG00000139697|ENST00000602398|SBNO1;REV__nc|ENSG00000139697|A3KN83-2|SBNO1;REV__nc|ENSG00000139697|A3KN83-3|SBNO1;REV__nc|ENSG00000139697|A3KN83-4|SBNO1	37.028477286268924	1.7418937515398478	2				NaN	NaN	0	NaN	5091	3113	8200
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8207	24.393	NaN	6568.8	30	0	915.88	0.14	+			36349	SESSVKVRL	9	65	502.7898107626535	1003.565068592107	2	502.7903137207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SESSVKVRL_	ENSG00000114098|ENST00000469044|ARMC8;ENST00000460495.5_1_3:137956301-138014731:+|nuORF;ENST00000466762.1_1_3:137982532-137982673:+|nuORF;nc|ENSG00000114098|Q8IUR7-2|ARMC8;nc|ENSG00000114098|Q8IUR7-3|ARMC8;nc|ENSG00000114098|Q8IUR7-7|ARMC8;nc|ENSG00000114098|Q8IUR7-8|ARMC8	52.936696900407355	0.27249468807391813	2				NaN	NaN	0	NaN	5092	3113	8200
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8225	24.431	NaN	21798	30	0	5260.2	0.214				-1	RPFICSQRSLP	11	75	454.24534933674363	1359.7142186104309	3	454.2475280761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_RPFIC(Carbamidomethyl (C))SQRSLP_	ENST00000394785.7_1_4:103997423-103997750:-|nuORF	39.873155843976775	0.5596786644756743	2				NaN	NaN	0	NaN	5107	3116	8224
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8226	24.434	NaN	22225	30	0	6874.9	0.106			+	36795	SICNSPASLG	10	80	474.72577709147663	947.4370012497533	2	474.7261962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SICNSPASLG_	REV__ENSG00000116183|ENST00000367662|PAPPA2	64.20726635412375	0.3275756395432415	2				NaN	NaN	0	NaN	5108	3116	8224
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8227	24.436	NaN	12247	30	0	2253.4	0.106	+			19854	KEEIVHQL	8	69	498.2793029955206	994.5440530578412	2	498.27960205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEEIVHQL_	ENSG00000085231|ENST00000380822|AK6;nc|ENSG00000085231|Q9Y3D8-2|AK6	147.69337715509954	0.24751049336667502	2				NaN	NaN	0	NaN	5109	3116	8224
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8228	24.438	NaN	19329	30	0	1958.5	0.106			+	26787	LVSAERTEL	9	96	509.28219435252043	NaN	0	509.2823181152344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LVSAERTEL_	REV__ENST00000489816.5_1_5:892252-892519:-|nuORF	87.75429964447693	0.046123490950689	2				NaN	NaN	0	NaN	5110	3116	8224
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8229	24.44	NaN	6147.6	30	0	483.6	0.106	+			16067	HAYLSKNSL	9	73	516.7776263287674	1031.5406997243347	2	516.77734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HAYLSKNSL_	ENSG00000131236|ENST00000372805|CAP1;ENST00000417455.1_1_10:44100293-44100833:-|nuORF;ENST00000461993.1_1_1:40535258-40537202:+|nuORF;ENST00000476047.1_1_3:76483919-76484456:+|nuORF;ENST00000494114.1_1_1:40536414-40537202:+|nuORF;nc|ENSG00000131236|Q01518-2|CAP1	60.11826168202944	0.21262886028301267	2				NaN	NaN	0	NaN	5111	3116	8224
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8230	24.442	NaN	3864.9	30	0	434.68	0.034			+	47963	VSMVDKAW	8	73	468.23725755000834	934.4599621668167	2	468.2376403808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VSMVDKAW_	REV__ENST00000610085.1_1_7:148394554-148394812:-|nuORF	63.30626980617807	0.4690498839812213	2				NaN	NaN	0	NaN	5112	3116	8224
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8231	24.442	NaN	4239.4	30	0	1300.9	0.143			+	7254	DALSRIREA	9	48	344.1925810131571	1029.5559136396714	3	344.1927490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DALSRIREA_	REV__LAMB2|p.V1563I|1|0.19|ENSG00000172037|chr3:49122257-49122257|C/T|missense_variant	34.172542307311794	0.4838870758800184	2				NaN	NaN	0	NaN	5113	3116	8224
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8244	24.471	NaN	43896	30	0	9662.5	0.192				-1	 	0	72	439.2526078910573	876.4906628489147	2	439.25286865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5123	3119	8243
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8245	24.475	NaN	50483	30	0	10276	0.106			+	-1	EGCRTSTKR	9	71	365.5170936010229	1093.5294514032687	3	365.517333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_EGC(Carbamidomethyl (C))RTSTKR_	REV__ENSG00000124490|ENST00000339139|CRISP2;REV__nc|ENSG00000124490|P16562-2|CRISP2	30.317721548370564	0.5199124245378496	2				NaN	NaN	0	NaN	5124	3119	8243
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8246	24.477	NaN	12902	30	0	3822.9	0.106				-1	 	0	66	436.76310741413454	871.5116618950691	2	436.76336669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5125	3119	8243
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8247	24.478	NaN	14686	30	0	1489	0.106			+	31176	QGLLKKVGQ	9	72	485.805221047413	969.595889161626	2	485.80548095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QGLLKKVGQ_	REV__ENSG00000196104|ENST00000357545|SPOCK3;REV__nc|ENSG00000196104|Q9BQ16-4|SPOCK3;REV__nc|ENSG00000196104|Q9BQ16-5|SPOCK3;REV__nc|ENSG00000196104|Q9BQ16-6|SPOCK3;REV__nc|ENSG00000196104|Q9BQ16-7|SPOCK3;REV__nc|ENSG00000196104|Q9BQ16-8|SPOCK3;REV__nc|ENSG00000196104|Q9BQ16|SPOCK3	60.97194046774394	0.20551255781574032	2				NaN	NaN	0	NaN	5126	3119	8243
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8248	24.48	NaN	21288	30	0	5290.2	0.106	+			29549	PEPGEPEER	9	72	520.2377512920774	1038.4609496509547	2	520.2384033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PEPGEPEER_	ENSG00000203667|ENST00000411948|COX20;ENST00000391839.6_1_1:244998983-245005526:+|nuORF;ENST00000498262.1_1_1:244998983-245005526:+|nuORF;nc|ENSG00000203667|Q5RI15-2|COX20	42.396135135203025	0.392153681582562	2				NaN	NaN	0	NaN	5127	3119	8243
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8249	24.482	NaN	8812.7	30	0	2047.9	0.106	+			11005	FEHKEEVL	8	68	515.7637009524088	1029.5128489716176	2	515.7640380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FEHKEEVL_	ENSG00000130119|ENST00000360845|GNL3L;ENST00000489691.1_1_X:54558969-54570464:+|nuORF	77.31757898189308	0.345924878368729	2				NaN	NaN	0	NaN	5128	3119	8243
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8250	24.484	NaN	7330.2	30	0	2671.5	0.034			+	46920	VIVSESDPA	9	64	458.7342139336824	915.4538749341648	2	458.73516845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VIVSESDPA_	REV__ENSG00000197386|ENST00000355072|HTT	40.5726180659479	0.4135428067754104	2				NaN	NaN	0	NaN	5129	3119	8243
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8263	24.513	NaN	12886	30	0	1102	0.214	+			18626	ISSVALRGK	9	81	465.78962322232184	929.5646935114437	2	465.7899475097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ISSVALRGK_	ENSG00000144406|ENST00000673920|UNC80;ENST00000489023.5_1_2:210693994-210832362:+|nuORF;nc|ENSG00000144406|Q8N2C7-2|UNC80;nc|ENSG00000144406|Q8N2C7-4|UNC80;nc|ENSG00000144406|Q8N2C7-7|UNC80;nc|ENSG00000144406|Q8N2C7|UNC80;UNC80|p.C1944Afs*12|1|0.28|ENSG00000144406|chr2:209933850-209933850|C/-|frameshift_variant;UNC80|p.N2032*|1|0.42|ENSG00000144406|chr2:209936855-209936856|-/T|frameshift_variant;UNC80|p.P2700Hfs*13|1|0.23|ENSG00000144406|chr2:209972238-209972238|C/-|frameshift_variant	71.87747018426188	0.13267044672804276	2				NaN	NaN	0	NaN	5139	3122	8262
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8264	24.516	NaN	22059	30	0	4222.7	0.106	+			14878	GTLPHPLQR	9	88	509.7928381770291	1017.5711234208583	2	509.7926330566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTLPHPLQR_	ENSG00000111319|ENST00000228916|SCNN1A;ENST00000540037.5_2_12:6464995-6472854:-|nuORF;nc|ENSG00000111319|P37088-2|SCNN1A;nc|ENSG00000111319|P37088-3|SCNN1A;nc|ENSG00000111319|P37088-4|SCNN1A;nc|ENSG00000111319|P37088-5|SCNN1A;nc|ENSG00000111319|P37088-6|SCNN1A	71.87747018426188	0.13267044672804276	2				NaN	NaN	0	NaN	5140	3122	8262
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8265	24.518	NaN	12881	30	0	3897.6	0.106	+			37628	SLQEVTIHEK	10	69	395.2149583774442	1182.6230457325325	3	395.2152099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLQEVTIHEK_	ENSG00000153107|ENST00000341068|ANAPC1;ENST00000426186.1_3_2:87098444-87121919:+|nuORF;ENST00000467878.1_1_2:112638162-112638411:-|nuORF;ENST00000489177.1_1_2:112630836-112638411:-|nuORF	36.446750945000026	0.5818864909973037	2				NaN	NaN	0	NaN	5141	3122	8262
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8266	24.52	NaN	7762.1	30	0	921.11	0.106				-1	 	0	67	428.26803016145027	854.5215073897006	2	428.268310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5142	3122	8262
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8267	24.522	NaN	4875.7	30	0	1641.5	0.106	+			13526	GLQTLRGPS	9	65	464.76370361522856	927.5128542972571	2	464.7640075683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GLQTLRGPS_	ENSG00000141665|ENST00000419743|FBXO15;FBXO15|p.F416Lfs*5|1|0.26|ENSG00000141665|chr18:74081942-74081942|A/-|frameshift_variant;FBXO15|p.K232Nfs*5|1|0.18|ENSG00000141665|chr18:74129494-74129494|T/-|frameshift_variant	37.81151784470057	0.4459294069877048	2				NaN	NaN	0	NaN	5143	3122	8262
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8268	24.524	NaN	3352	30	0	686.37	0.036				-1	PCSLSSLTLQ	10	70	553.2814254237787	1104.5482979143574	2	553.2828979492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_PC(Carbamidomethyl (C))SLSSLTLQ_	ENST00000520810.5_1_8:42188602-42189049:+|nuORF	32.81241826257853	0.6118718159329168	2				NaN	NaN	0	NaN	5144	3122	8262
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8269	24.524	NaN	3016.1	30	0	260.37	0.14	+			1403	AEVTKQVSM	9	66	496.75719002353685	991.4998271138737	2	496.75732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AEVTKQVSM_	ENSG00000127946|ENST00000336926|HIP1;nc|ENSG00000127946|O00291-3|HIP1;nc|ENSG00000127946|O00291-4|HIP1	54.722347961057174	0.257609425301511	2				NaN	NaN	0	NaN	5145	3122	8262
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8282	24.555	NaN	51132	30	0	6320.1	0.214	+			3597	ASVNTLVNK	9	102	473.2717784054944	944.5290038777888	2	473.2716064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASVNTLVNK_	ARFIP1|p.K303Nfs*13|1|0.22|ENSG00000164144|chr4:152888246-152888246|A/-|frameshift_variant;ENSG00000164144|ENST00000353617|ARFIP1;nc|ENSG00000164144|P53367-2|ARFIP1;nc|ENSG00000164144|P53367-3|ARFIP1	172.24860141594272	0.002383092361811508	2				NaN	NaN	0	NaN	5155	3125	8281
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8283	24.558	NaN	105120	30	0	21037	0.106	+			45169	TVMDKTRAL	9	93	517.786279859052	1033.558006784904	2	517.7869262695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVMDKTRAL_	CARD17-CASP1|1|fusion;CARD17-CASP1|2|fusion;CASP1|p.N205Ifs*7|1|0.4|ENSG00000137752|chr11:105030343-105030343|T/-|frameshift_variant;ENSG00000137752|ENST00000533400|CASP1;ENSG00000204397|ENST00000673097|CARD16;ENST00000526511.5_1_11:104901858-104905840:-|nuORF;ENST00000527065.1_1_11:104915107-104915377:-|nuORF;nc|ENSG00000137752|P29466-2|CASP1;nc|ENSG00000204397|Q5EG05|CARD16	104.01359247289065	0.03510646158778409	2				NaN	NaN	0	NaN	5156	3125	8281
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8284	24.56	NaN	61819	30	0	20641	0.106	+			4565	ATLEETLVKKK	11	84	420.59011329917354	1258.7485104977206	3	420.5905456542969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATLEETLVKKK_	ENSG00000254093|ENST00000314787|PINX1	75.65223720490533	0.18861880313260296	2				NaN	NaN	0	NaN	5157	3125	8281
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8285	24.562	NaN	11910	30	0	3642.2	0.106	+			30494	QAFESSQKY	9	83	544.2561986402824	1086.4978443473647	2	544.2566528320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QAFESSQKY_	ENSG00000090238|ENST00000398841|YPEL3;ENST00000565479.5_1_16:30104033-30107516:-|nuORF;nc|ENSG00000090238|P61236|YPEL3	120.8684288430529	0.02067403653475984	2				NaN	NaN	0	NaN	5158	3125	8281
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8286	24.564	NaN	26711	30	0	2954.1	0.106	+			42628	TAVEAGRAL	9	83	444.2502847307081	886.4860165282162	2	444.2502136230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TAVEAGRAL_	ENSG00000032444|ENST00000600737|PNPLA6;nc|ENSG00000032444|Q8IY17-2|PNPLA6;nc|ENSG00000032444|Q8IY17-3|PNPLA6;nc|ENSG00000032444|Q8IY17-5|PNPLA6;nc|ENSG00000032444|Q8IY17|PNPLA6;PNPLA6|p.S1175Pfs*10|1|0.55|ENSG00000032444|chr19:7558944-7558944|G/-|frameshift_variant	88.17693792209575	0.07000514020414955	2				NaN	NaN	0	NaN	5159	3125	8281
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8287	24.566	NaN	3997.9	30	0	636.81	0.035				-1	 	0	64	493.2237137481029	984.4328745630058	2	493.2240905761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5160	3125	8281
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8288	24.566	NaN	2915.5	30	0	285.23	0.139			+	8976	EFLTDAMQ	8	71	477.71511992039814	953.4156869075963	2	477.7153015136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EFLTDAMQ_	REV__ENSG00000065609|ENST00000369694|SNAP91;REV__nc|ENSG00000065609|O60641-3|SNAP91;REV__nc|ENSG00000065609|O60641-4|SNAP91;REV__SNAP91|p.E224*|2|0.33|ENSG00000065609|chr6:83641191-83641192|-/A|frameshift_variant;REV__SNAP91|p.L110Wfs*15|1|0.38|ENSG00000065609|chr6:83662367-83662367|A/-|frameshift_variant	30.503639358989545	0.7238069182250283	2				NaN	NaN	0	NaN	5161	3125	8281
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8300	24.596	NaN	172250	30	0	107200	0.214				-1	 	0	91	322.1934122737376	642.3722716142752	2	322.19366455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5170	3128	8299
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8301	24.599	NaN	6341.1	30	0	1236.7	0.106			+	518	ACQFLKLAP	9	73	495.77618749224933	989.5378220512987	2	495.7775573730469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ACQFLKLAP_	REV__ENSG00000091656|ENST00000651372|ZFHX4;REV__ENST00000458716.2_1_8:77616323-77620415:+|nuORF;REV__nc|ENSG00000091656|Q86UP3-2|ZFHX4;REV__nc|ENSG00000091656|Q86UP3-3|ZFHX4;REV__nc|ENSG00000091656|Q86UP3-4|ZFHX4;REV__nc|ENSG00000091656|Q86UP3|ZFHX4;REV__ZFHX4|p.D2246*|1|0.34|ENSG00000091656|chr8:76853650-76853651|-/T|frameshift_variant;REV__ZFHX4|p.H1565Tfs*5|1|0.28|ENSG00000091656|chr8:76851613-76851613|T/-|frameshift_variant;REV__ZFHX4|p.I2143Nfs*7|1|0.31|ENSG00000091656|chr8:76853343-76853344|-/A|frameshift_variant;REV__ZFHX4|p.K1442Nfs*10|1|0.18|ENSG00000091656|chr8:76851241-76851241|A/-|frameshift_variant;REV__ZFHX4|p.K1867Nfs*7|1|0.09|ENSG00000091656|chr8:76852518-76852518|A/-|frameshift_variant;REV__ZFHX4|p.L1719Cfs*6|1|0.13|ENSG00000091656|chr8:76852073-76852073|T/-|frameshift_variant;REV__ZFHX4|p.P2056Hfs*26|1|0.19|ENSG00000091656|chr8:76853081-76853084|CCTC/-|frameshift_variant;REV__ZFHX4|p.P2056Tfs*82|1|0.25|ENSG00000091656|chr8:76853079-76853083|CTCCT/-|frameshift_variant;REV__ZFHX4|p.P2057Hfs*26|2|0.17|ENSG00000091656|chr8:76853084-76853084|C/-|frameshift_variant;REV__ZFHX4|p.Q1674Afs*4|1|0.14|ENSG00000091656|chr8:76851934-76851935|-/A|frameshift_variant;REV__ZFHX4|p.R2647Gfs*44|1|0.25|ENSG00000091656|chr8:76854854-76854854|A/-|frameshift_variant;REV__ZFHX4|p.V1343Sfs*4|1|0.08|ENSG00000091656|chr8:76850945-76850946|-/A|frameshift_variant;REV__ZFHX4|p.Y3286Ifs*70|1|0.46|ENSG00000091656|chr8:76863562-76863563|-/G|frameshift_variant	55.50420428727701	0.2510918378945873	2				NaN	NaN	0	NaN	5171	3128	8299
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8302	24.601	NaN	13440	30	0	6151.3	0.106			+	37740	SLTPQTRATHE	11	72	414.2146745679038	1239.6221943039113	3	414.2156982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLTPQTRATHE_	REV__ENSG00000137413|ENST00000372977|TAF8;REV__ENST00000482926.1_1_6:42018279-42030992:+|nuORF;REV__nc|ENSG00000137413|Q7Z7C8-2|TAF8;REV__nc|ENSG00000137413|Q7Z7C8-4|TAF8	33.03940026070387	0.6432348334061824	2				NaN	NaN	0	NaN	5172	3128	8299
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8303	24.603	NaN	1515	30	0	525.21	0.106			+	2050	AKVVSNLHL	9	36	327.53429358530343	979.5810513561103	3	327.53448486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AKVVSNLHL_	REV__ENSG00000168795|ENST00000307750|ZBTB5;REV__ZBTB5|p.S130Vfs*22|3|0.32|ENSG00000168795|chr9:37442165-37442165|G/-|frameshift_variant;REV__ZBTB5|p.T398Wfs*7|1|0.07|ENSG00000168795|chr9:37441360-37441361|-/TGAGTCCA|frameshift_variant	25.450171626174864	0.5654022654467333	2				NaN	NaN	0	NaN	5173	3128	8299
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8304	24.605	NaN	4403.5	30	0	514.11	0.106	+			24975	LLCPQRTPA	9	68	499.7762794967091	NaN	0	499.7763671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LLCPQRTPA_	ENST00000265801.6_2_8:20104052-20104400:-|nuORF	27.882242232435846	0.3367954786602879	2				NaN	NaN	0	NaN	5174	3128	8299
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8305	24.607	NaN	4313.2	30	0	474.55	0.035	+			51356	YTAAILGPAAG	11	74	502.7743055109684	1003.5340580887369	2	502.77471923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YTAAILGPAAG_	ENSG00000101187|ENST00000217159|SLCO4A1;nc|ENSG00000101187|Q96BD0-3|SLCO4A1;nc|ENSG00000101187|Q96BD0-4|SLCO4A1	59.93077597824379	0.32407304095777845	2				NaN	NaN	0	NaN	5175	3128	8299
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8306	24.607	NaN	12479	30	0	5821.7	0.143	+			2938	ASDPHIIIK	9	45	331.8621853893776	992.5647267683328	3	331.8624572753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASDPHIIIK_	ENSG00000134313|ENST00000256707|KIDINS220;ENST00000488729.5_1_2:8870852-8965899:-|nuORF;KIDINS220|p.K1581Rfs*8|1|0.28|ENSG00000134313|chr2:8731294-8731294|T/-|frameshift_variant;KIDINS220|p.P1081Rfs*48|1|0.22|ENSG00000134313|chr2:8750284-8750284|G/-|frameshift_variant;KIDINS220|p.R1551Efs*38|1|0.08|ENSG00000134313|chr2:8731386-8731386|C/-|frameshift_variant;nc|ENSG00000134313|Q9ULH0-2|KIDINS220;nc|ENSG00000134313|Q9ULH0-3|KIDINS220;nc|ENSG00000134313|Q9ULH0-4|KIDINS220	30.503639358989545	0.5181749237905803	2				NaN	NaN	0	NaN	5176	3128	8299
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8319	24.637	NaN	17802	30	0	2586.5	0.214	+			2939	ASDPHIIIK	9	77	497.2896014353416	992.5646499374832	2	497.28997802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASDPHIIIK_	ENSG00000134313|ENST00000256707|KIDINS220;ENST00000488729.5_1_2:8870852-8965899:-|nuORF;KIDINS220|p.K1581Rfs*8|1|0.28|ENSG00000134313|chr2:8731294-8731294|T/-|frameshift_variant;KIDINS220|p.P1081Rfs*48|1|0.22|ENSG00000134313|chr2:8750284-8750284|G/-|frameshift_variant;KIDINS220|p.R1551Efs*38|1|0.08|ENSG00000134313|chr2:8731386-8731386|C/-|frameshift_variant;nc|ENSG00000134313|Q9ULH0-2|KIDINS220;nc|ENSG00000134313|Q9ULH0-3|KIDINS220;nc|ENSG00000134313|Q9ULH0-4|KIDINS220	115.49404669440601	0.023927554121326553	2				NaN	NaN	0	NaN	5186	3131	8318
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8320	24.64	NaN	67756	30	0	16253	0.106	+			40034	STMVDVRVMKK	11	87	431.9046608963064	1292.6921532891192	3	431.9052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STMVDVRVMKK_	ENSG00000085224|ENST00000373344|ATRX;nc|ENSG00000085224|P46100-2|ATRX;nc|ENSG00000085224|P46100-3|ATRX;nc|ENSG00000085224|P46100-4|ATRX;nc|ENSG00000085224|P46100-5|ATRX	79.48907831485694	0.15663227531959176	2				NaN	NaN	0	NaN	5187	3131	8318
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8321	24.642	NaN	17037	30	0	4748.6	0.106	+			40877	SVFHASLAK	9	73	480.26873568057596	958.5229184279519	2	480.2690734863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVFHASLAK_	ENSG00000064651|ENST00000262461|SLC12A2;nc|ENSG00000064651|P55011-3|SLC12A2;SLC12A2|p.E1119Rfs*7|1|0.47|ENSG00000064651|chr5:128184417-128184418|-/A|frameshift_variant;SLC12A2|p.P1171Sfs*18|1|0.38|ENSG00000064651|chr5:128186498-128186499|-/TC|frameshift_variant	148.98678547993487	0.0071052929883181565	2				NaN	NaN	0	NaN	5188	3131	8318
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8322	24.644	NaN	8502.1	30	0	3045	0.106	+			39785	STKTLGIVSLQ	11	70	382.89559230709665	1145.66494752149	3	382.8958435058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STKTLGIVSLQ_	ENST00000513079.5_1_5:73981085-74001232:+|nuORF	36.31764250033197	0.6083289427130232	2				NaN	NaN	0	NaN	5189	3131	8318
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8323	24.646	NaN	3921.9	30	0	385.9	0.106				-1	 	0	50	360.7416636226943	719.4687743121887	2	360.7419128417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5190	3131	8318
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8324	24.648	NaN	8343.2	30	0	1113.8	0.035			+	7233	DALDVLDKR	9	79	522.7871452183335	1043.559737503467	2	522.7877807617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DALDVLDKR_	REV__tr|U7SZZ9|U7SZZ9_FUSNUGalactose-1-phosphateuridylyltransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=galTPE=3SV=1	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	5191	3131	8318
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8325	24.648	NaN	6073	30	0	1186.5	0.141	+			43945	TPDETKLKM	9	67	531.7778537159099	1061.5411544986198	2	531.7791137695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TPDETKLKM_	ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;TRRAP-ASNS|1|fusion;TRRAP-ASNS|2|fusion;TRRAP|p.A1620Cfs*35|1|0.27|ENSG00000196367|chr7:98949499-98949500|-/G|frameshift_variant;TRRAP|p.I564Hfs*9|1|0.29|ENSG00000196367|chr7:98910389-98910390|-/G|frameshift_variant;TRRAP|p.K3443Sfs*19|1|0.28|ENSG00000196367|chr7:99004246-99004246|A/-|frameshift_variant;TRRAP|p.L291*|1|0.36|ENSG00000196367|chr7:98900691-98900691|T/-|frameshift_variant;TRRAP|p.P1292Lfs*17|1|0.44|ENSG00000196367|chr7:98933258-98933258|C/-|frameshift_variant;TRRAP|p.P1360Afs*14|1|0.05|ENSG00000196367|chr7:98935641-98935642|-/GCAAATAA|frameshift_variant	99.01295224348159	0.040209060045561164	2				NaN	NaN	0	NaN	5192	3131	8318
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8339	24.68	NaN	17196	30	0	3760	0.215	+			45092	TVIHFNNPK	9	76	535.2920916856062	1068.5696304380124	2	535.293701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVIHFNNPK_	ENSG00000134717|ENST00000313334|BTF3L4;ENSG00000145741|ENST00000380591|BTF3;ENST00000418879.1_1_6:137865036-137865375:-|nuORF;nc|ENSG00000134717|Q96K17-2|BTF3L4;nc|ENSG00000145741|P20290-2|BTF3	131.61620852596164	0.014413238321579053	2				NaN	NaN	0	NaN	5203	3134	8338
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8340	24.684	NaN	6306	30	0	1554.1	0.106			+	29076	NTLCNYTL	8	65	471.2245037251083	940.4344545170167	2	471.2247009277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NTLCNYTL_	REV__ENSG00000134815|ENST00000328771|DHX34	45.9519527083369	0.6193794311207887	2				NaN	NaN	0	NaN	5204	3134	8338
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8341	24.686	NaN	4507.7	30	0	532.02	0.106	+			45962	VASSLDVQA	9	63	445.23457914788673	888.4546053625735	2	445.23455810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VASSLDVQA_	ENSG00000224470|ENST00000427980|ATXN1L	71.87747018426188	0.13267044672804276	2				NaN	NaN	0	NaN	5205	3134	8338
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8342	24.687	NaN	8145.9	30	0	746.98	0.106				-1	RLCENIAGHLK	11	78	437.5707107823438	1309.6903029472314	3	437.5711669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_RLC(Carbamidomethyl (C))ENIAGHLK_	ENSG00000121691|ENST00000241052|CAT;ENST00000525707.1_1_11:34482779-34490041:+|nuORF	33.54155758786652	0.6379676125710366	2				NaN	NaN	0	NaN	5206	3134	8338
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8343	24.689	NaN	3843.5	30	0	453.34	0.106				-1	 	0	55	422.2282788808549	842.4420048285098	2	422.2286682128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5207	3134	8338
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8344	24.691	NaN	3675.8	30	0	2215.8	0.037				-1	 	0	60	574.2844357047006	1146.5543184762012	2	574.2853393554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5208	3134	8338
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8345	24.692	NaN	7705.2	30	0	1134.3	0.141	+			28717	NNKLQDFTK	9	72	554.2925253517847	1106.5704977703692	2	554.2938842773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NNKLQDFTK_	SLIT1|p.E1322K|1|0.59|ENSG00000187122|chr10:97002894-97002894|C/T|missense_variant	67.49366992349736	0.1516260258713357	2				NaN	NaN	0	NaN	5209	3134	8338
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8357	24.719	NaN	48774	30	0	5139	0.214				-1	 	0	105	474.76068517111423	947.5068174090285	2	474.7608642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5218	3137	8356
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8358	24.723	NaN	13530	30	0	1583.9	0.106	+			11647	FQHVGKAF	8	75	467.2502965574509	932.4860401817018	2	467.25042724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FQHVGKAF_	ENSG00000254772|ENST00000329251|EEF1G;ENST00000526409.5_1_11:62327153-62342310:-|nuORF;nc|ENSG00000254772|P26641-2|EEF1G;NCEH1-EEF1G|1|fusion	94.00642277110589	0.2653416297186628	2				NaN	NaN	0	NaN	5219	3137	8356
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8359	24.725	NaN	6351.8	30	0	835.04	0.106			+	40823	SVEELLWP	8	66	486.7574959112934	971.5004388893868	2	486.7586669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVEELLWP_	REV__ENSG00000173258|ENST00000309235|ZNF483;REV__nc|ENSG00000173258|Q8TF39-2|ZNF483	42.47446043378293	0.6409579893742323	2				NaN	NaN	0	NaN	5220	3137	8356
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8360	24.727	NaN	13615	30	0	2090	0.106	+			19889	KEETKIIV	8	71	480.29189425468155	958.5692355761631	2	480.2922668457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEETKIIV_	ADGRG4|p.D2874Rfs*16|1|0.45|ENSG00000156920|chrX:136403281-136403282|-/A|frameshift_variant;ADGRG4|p.F2955Vfs*21|1|0.32|ENSG00000156920|chrX:136405894-136405895|-/G|frameshift_variant;ADGRG4|p.G2486D|1|0.06|ENSG00000156920|chrX:136371388-136371388|G/A|missense_variant;ENSG00000156920|ENST00000394143|ADGRG4;nc|ENSG00000156920|Q8IZF6-2|ADGRG4;nc|ENSG00000156920|Q8IZF6-3|ADGRG4	64.20726635412375	0.4601301477144759	2				NaN	NaN	0	NaN	5221	3137	8356
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8361	24.728	NaN	7711	30	0	1109.3	0.106	+			47324	VPAEHQVAM	9	63	491.2444797901635	980.474406647127	2	491.244873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VPAEHQVAM_	ENSG00000196943|ENST00000267425|NOP9;nc|ENSG00000196943|Q86U38-2|NOP9	60.11826168202944	0.21262886028301267	2				NaN	NaN	0	NaN	5222	3137	8356
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8362	24.73	NaN	7883.6	30	0	4392.4	0.036			+	45114	TVITAIVPGR	10	47	342.881524653564	1025.622744560892	3	342.8817443847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TVITAIVPGR_	REV__ENSG00000173705|ENST00000309558|SUSD5	26.69291269510374	0.6618461711292317	2				NaN	NaN	0	NaN	5223	3137	8356
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8363	24.731	NaN	6665.2	30	0	2853.1	0.14	+			9225	EGSLYGLSIA	10	60	505.2635088097162	1008.5124646862324	2	505.26409912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EGSLYGLSIA_	ENSG00000011260|ENST00000225298|UTP18	49.44154591367651	0.46214596422418036	2				NaN	NaN	0	NaN	5224	3137	8356
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8379	24.766	NaN	287360	30	0	122930	0.214				-1	 	0	113	374.5445349530656	1120.6117754593968	3	374.5448913574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5237	3140	8378
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8380	24.77	NaN	50815	30	0	20335	0.106	+			39968	STMGYMMAKK	10	89	383.18115349589544	1146.5216310878864	3	383.1817626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STMGYMMAKK_	ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;ENST00000518337.1_1_8:74128289-74128592:-|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P	45.97224482568171	0.49411383603842696	2				NaN	NaN	0	NaN	5238	3140	8378
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8381	24.772	NaN	13469	30	0	1702	0.106	+			11886	FTNEGRAL	8	74	454.2347224946033	906.4548920560067	2	454.2348937988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FTNEGRAL_	ENSG00000170876|ENST00000306077|TMEM43	67.49366992349736	0.4277823096851425	2				NaN	NaN	0	NaN	5239	3140	8378
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8382	24.773	NaN	11510	30	0	1545.7	0.106	+			46286	VEIAKQSV	8	69	437.25494405460194	872.4953351760039	2	437.2554016113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VEIAKQSV_	ENSG00000113558|ENST00000353411|SKP1;ENST00000506450.1_1_4:25624416-25624897:+|nuORF;nc|ENSG00000113558|P63208-2|SKP1	67.49366992349736	0.4277823096851425	2				NaN	NaN	0	NaN	5240	3140	8378
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8383	24.775	NaN	20497	30	0	5633.1	0.106				-1	 	0	68	469.252829907107	936.491106881014	2	469.2528381347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5241	3140	8378
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8384	24.777	NaN	28914	30	0	16601	0.04				-1	 	0	64	447.92054974350646	1340.7398198307194	3	447.9207763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5242	3140	8378
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8385	24.778	NaN	18108	30	0	3343.5	0.142	+			37935	SPEELARKY	9	77	364.86074886758	1091.56041720294	3	364.8609619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SPEELARKY_	ENSG00000002726|ENST00000360937|AOC1;nc|ENSG00000002726|P19801-2|AOC1	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	5243	3140	8378
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8399	24.808	NaN	23340	30	0	3316.7	0.214	+			10732	FAEDGARTV	9	79	483.2376611164094	964.4607692996188	2	483.23779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FAEDGARTV_	ENSG00000157240|ENST00000287934|FZD1	101.45984612302182	0.0377122763612125	2				NaN	NaN	0	NaN	5254	3143	8398
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8400	24.811	NaN	9085.2	30	0	1540.1	0.106	+			1375	AEVKERVTL	9	71	522.8055014684685	1043.596450003737	2	522.8065795898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEVKERVTL_	EIF2B5|p.L605Pfs*9|1|0.26|ENSG00000145191|chr3:184143504-184143505|-/C|frameshift_variant;ENSG00000145191|ENST00000648915|EIF2B5;ENST00000491144.5_1_3:183857994-183862728:+|nuORF;ENST00000492773.5_1_3:183859720-183860594:+|nuORF	76.16968421966216	0.11411088698345859	2				NaN	NaN	0	NaN	5255	3143	8398
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8401	24.813	NaN	9322.5	30	0	983	0.106				-1	 	0	73	526.8078875481782	1051.6012221631563	2	526.8089599609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5256	3143	8398
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8402	24.815	NaN	10353	30	0	1806.4	0.106			+	42019	SVYSRESQ	8	69	478.22811361374033	954.4416742942807	2	478.228271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVYSRESQ_	REV__tr|U7SM68|U7SM68_FUSNUOutermembraneproteinTolCOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02098PE=3SV=1	34.172542307311794	0.6954784234644539	2				NaN	NaN	0	NaN	5257	3143	8398
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8403	24.817	NaN	7760	30	0	633.55	0.106	+			18797	ITSALNQL	8	69	430.2472841123676	858.4800152915352	2	430.24755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ITSALNQL_	ENSG00000133056|ENST00000684373|PIK3C2B;PIK3C2B|p.C561Afs*18|1|0.5|ENSG00000133056|chr1:204457761-204457761|G/-|frameshift_variant	76.7741389293348	0.3504530765139327	2				NaN	NaN	0	NaN	5258	3143	8398
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8404	24.819	NaN	9647.3	30	0	2174.7	0.035			+	5745	AVGDQIRQL	9	71	500.28182743669754	998.5491019401951	2	500.28240966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AVGDQIRQL_	REV__nc|ENSG00000261359|I3L0S3|PYCARD-AS1	77.31757898189308	0.1091473830098891	2				NaN	NaN	0	NaN	5259	3143	8398
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8405	24.819	NaN	10090	30	0	1114	0.14	+			43171	TETIIKAKD	9	74	509.7928381770291	1017.5711234208583	2	510.29779052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TETIIKAKD_	tr|U7SKJ4|U7SKJ4_FUSNUUncharacterizedprotein(Fragment)OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02177PE=4SV=1	31.529811441608018	0.5085848003137583	2				NaN	NaN	0	NaN	5260	3143	8398
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8417	24.846	NaN	30468	30	0	6038.8	0.214	+			6050	AVMGNPVTR	9	97	472.75252948630094	943.4905060394019	2	472.75244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVMGNPVTR_	ENSG00000136021|ENST00000360820|SCYL2	60.11826168202944	0.21262886028301267	2				NaN	NaN	0	NaN	5269	3146	8416
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8418	24.849	NaN	12488	30	0	3404.8	0.106	+			18598	ISQYLQNSK	9	84	540.7885786431793	1079.5626043531586	2	540.7890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ISQYLQNSK_	ENSG00000128052|ENST00000263923|KDR;KDR|p.T1238Hfs*7|1|0.51|ENSG00000128052|chr4:55082586-55082586|T/-|frameshift_variant	106.68306549817024	0.032382560583716295	2				NaN	NaN	0	NaN	5270	3146	8416
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8419	24.851	NaN	23442	30	0	8946.6	0.106	+			15704	GVNRFCLSK	9	68	360.857916713662	1079.551920741186	3	360.8581848144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_GVNRFC(Carbamidomethyl (C))LSK_	ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;nc|ENSG00000185164|Q5JPE7-3|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2;NOMO1|p.P1102Hfs*42|1|0.36|ENSG00000103512|chr16:14886838-14886838|C/-|frameshift_variant	54.722347961057174	0.257609425301511	2				NaN	NaN	0	NaN	5271	3146	8416
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8420	24.853	NaN	12682	30	0	1403.6	0.106	+			36256	SENKAQVSL	9	80	488.25788787187344	974.5012228105469	2	488.25848388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SENKAQVSL_	ENSG00000152818|ENST00000367545|UTRN;nc|ENSG00000152818|P46939-2|UTRN;UTRN|p.G3160*|1|0.03|ENSG00000152818|chr6:144821001-144821002|AG/-|frameshift_variant;UTRN|p.K1847Ffs*66|1|0.07|ENSG00000152818|chr6:144516945-144516946|-/TTTAA|frameshift_variant;UTRN|p.K951Rfs*32|2|0.22|ENSG00000152818|chr6:144461335-144461335|A/-|frameshift_variant;UTRN|p.L985Wfs*4|1|0.07|ENSG00000152818|chr6:144462753-144462754|-/GGGC|frameshift_variant;UTRN|p.R3003Pfs*5|1|0.27|ENSG00000152818|chr6:144793915-144793916|-/C|frameshift_variant;UTRN|p.T2422Hfs*35|1|0.47|ENSG00000152818|chr6:144557282-144557282|A/-|frameshift_variant	91.26522074875469	0.06129826844580791	2				NaN	NaN	0	NaN	5272	3146	8416
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8421	24.855	NaN	11051	30	0	3397.5	0.106	+			1940	AISPQAQDKRP	11	86	605.8305417245533	1209.6465305159065	2	605.8307495117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AISPQAQDKRP_	ENSG00000229924|ENST00000512047|FAM90A26	45.02220120713402	0.4892240028381124	2				NaN	NaN	0	NaN	5273	3146	8416
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8422	24.857	NaN	7069.4	30	0	1056.5	0.034			+	27501	MMMIALSK	8	67	462.73897284550213	923.4633927578043	2	462.7393798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MMMIALSK_	REV__PES1|p.R534S|1|0.21|ENSG00000100029|chr22:30578920-30578920|G/T|missense_variant	65.80317337860623	0.44433089765398776	2				NaN	NaN	0	NaN	5274	3146	8416
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8423	24.857	NaN	5691.3	30	0	738.15	0.14				-1	AIGLACAGFC	10	73	520.2376673914164	1038.4607818496327	2	520.23828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C)	_AIGLAC(Carbamidomethyl (C))AGFC(Carbamidomethyl (C))_	ENSG00000177108|ENST00000319374|ZDHHC22	26.79610172149135	0.6610034878437611	2				NaN	NaN	0	NaN	5275	3146	8416
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8435	24.885	NaN	35636	30	0	4722	0.214	+			41722	SVSEVVVNR	9	83	494.77432831793743	987.5341037026749	2	494.7746276855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSEVVVNR_	ENSG00000099821|ENST00000588649|POLRMT;ENST00000578759.1_1_17:60217316-60217976:-|nuORF	154.1183686248401	0.005909203230691971	2				NaN	NaN	0	NaN	5284	3149	8434
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8436	24.888	NaN	57427	30	0	12110	0.106				-1	 	0	94	532.7896030745741	1063.564653215948	2	532.7908325195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5285	3149	8434
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8437	24.89	NaN	19235	30	0	3532.9	0.106				-1	 	0	71	454.2472942661554	906.4800355991108	2	454.24755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5286	3149	8434
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8438	24.892	NaN	3650.3	30	0	2067.7	0.106	+			31286	QICVALTKK	9	36	335.20352131736763	1002.5887345523029	3	335.2037353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QICVALTKK_	ENST00000374393.4_1_1:24840890-24840944:+|nuORF	21.9598887501803	0.5980208138527809	2				NaN	NaN	0	NaN	5287	3149	8434
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8439	24.894	NaN	6793.1	30	0	792.75	0.106			+	31102	QFQRIKSY	8	74	535.2920916856062	1068.5696304380124	2	536.7932739257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QFQRIKSY_	REV__ENSG00000100403|ENST00000352645|ZC3H7B	58.78195531508484	0.5138399468736706	2				NaN	NaN	0	NaN	5288	3149	8434
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8440	24.896	NaN	5483.5	30	0	1026.8	0.035	+			22435	KTLDQAIMK	9	68	524.2964854588398	1046.5784179844795	2	524.2974243164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KTLDQAIMK_	ENSG00000113522|ENST00000378823|RAD50;nc|ENSG00000113522|Q92878-2|RAD50;nc|ENSG00000113522|Q92878-3|RAD50	43.650786325866115	0.37743712540499297	2				NaN	NaN	0	NaN	5289	3149	8434
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8441	24.896	NaN	3973.9	30	0	933.73	0.145			+	9645	ELRYIKELL	9	50	392.90409621447384	1175.6904592436215	3	392.9045104980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ELRYIKELL_	REV__ENSG00000152969|ENST00000409021|JAKMIP1;REV__JAKMIP1|p.L821Cfs*5|1|0.31|ENSG00000152969|chr4:6026262-6026262|A/-|frameshift_variant;REV__nc|ENSG00000152969|Q96N16-5|JAKMIP1;REV__nc|ENSG00000152969|Q96N16-6|JAKMIP1;REV__nc|ENSG00000152969|Q96N16-7|JAKMIP1;REV__nc|ENSG00000152969|Q96N16|JAKMIP1	37.81151784470057	0.4459294069877048	2				NaN	NaN	0	NaN	5290	3149	8434
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8453	24.924	NaN	76243	30	0	11001	0.214			+	4747	ATMPSPSRMEQ	11	125	412.1892993645759	1233.5460686939277	3	412.1900329589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATMPSPSRMEQ_	REV__ENSG00000187605|ENST00000409262|TET3;REV__ENST00000475405.2_1_2:74274397-74300767:+|nuORF;REV__nc|ENSG00000187605|O43151-2|TET3;REV__nc|ENSG00000187605|O43151-3|TET3;REV__TET3|p.A1477Pfs*54|1|0.32|ENSG00000187605|chr2:74101214-74101214|G/-|frameshift_variant;REV__TET3|p.A764Lfs*2|1|0.23|ENSG00000187605|chr2:74048203-74048203|G/-|frameshift_variant;REV__TET3|p.F1385Lfs*17|1|0.17|ENSG00000187605|chr2:74100936-74100936|C/-|frameshift_variant;REV__TET3|p.P728Lfs*38|1|0.25|ENSG00000187605|chr2:74048095-74048095|C/-|frameshift_variant;REV__TET3|p.S1618Afs*5|2|0.34|ENSG00000187605|chr2:74101634-74101634|C/-|frameshift_variant;REV__TET3|p.T1749Hfs*5|2|0.29|ENSG00000187605|chr2:74102024-74102025|-/G|frameshift_variant;REV__TET3|p.V1242Gfs*44|1|0.4|ENSG00000187605|chr2:74100510-74100511|-/G|frameshift_variant	58.22992032128504	0.3392555181951113	2				NaN	NaN	0	NaN	5299	3152	8452
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8454	24.927	NaN	12333	30	0	904.23	0.106				-1	 	0	77	415.9013001779302	1244.6820711339906	3	415.90167236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5300	3152	8452
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8455	24.929	NaN	17592	30	0	3816.6	0.106				-1	 	0	59	434.72937774351925	867.4442025538385	2	434.7296447753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5301	3152	8452
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8456	24.931	NaN	18886	30	0	3545.6	0.106	+			16586	HGFGNVHAY	9	78	501.2326035219576	1000.4506541107153	2	501.23291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HGFGNVHAY_	ENSG00000144354|ENST00000306721|CDCA7;nc|ENSG00000144354|Q9BWT1-3|CDCA7;nc|ENSG00000144354|Q9BWT1-5|CDCA7;nc|ENSG00000144354|Q9BWT1-6|CDCA7;nc|ENSG00000144354|Q9BWT1|CDCA7	101.21157088398209	0.03796561369277615	2				NaN	NaN	0	NaN	5302	3152	8452
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8457	24.933	NaN	7810.2	30	0	1052.9	0.106	+			16481	HETRLVEV	8	79	491.7693263295107	981.5240997258214	2	491.76934814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HETRLVEV_	ENSG00000113368|ENST00000261366|LMNB1;ENST00000504788.5_1_5:126112928-126171953:+|nuORF	72.87924865735499	0.38290713436690915	2				NaN	NaN	0	NaN	5303	3152	8452
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8458	24.935	NaN	10283	30	0	3463.1	0.041				-1	YLAFLHKWMNS	11	77	475.9038878364688	1424.6898341096064	3	475.9041748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_YLAFLHKWM(Oxidation (M))NS_	ENST00000510957.1_1_22:31049909-31050715:-|nuORF	17.833141474888023	0.7869876583333034	2				NaN	NaN	0	NaN	5304	3152	8452
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8459	24.935	NaN	4828.9	30	0	642.19	0.139	+			44691	TTIKAPLKP	9	69	484.8100373733364	967.6055218134728	2	484.8104553222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TTIKAPLKP_	ENSG00000196305|ENST00000443024|IARS1;ENST00000474340.1_1_9:95003027-95004705:-|nuORF	53.351449002276354	0.2690372970092375	2				NaN	NaN	0	NaN	5305	3152	8452
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8470	24.963	NaN	56491	30	0	12985	0.214				-1	 	0	98	404.71877668486627	807.4230004365326	2	404.71917724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5313	3155	8469
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8471	24.966	NaN	13898	30	0	1330.8	0.106	+			33202	RFACAVVCIQK	11	85	619.3308300682502	1236.6471072033003	2	619.3306274414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RFACAVVCIQK_	ABCE1|p.L313Wfs*10|1|0.22|ENSG00000164163|chr4:145119941-145119941|T/-|frameshift_variant;ENSG00000164163|ENST00000296577|ABCE1	82.24051045832904	0.13369445791701148	2				NaN	NaN	0	NaN	5314	3155	8469
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8472	24.968	NaN	21336	30	0	5805.2	0.106	+			15120	GTQTVFPSK	9	90	482.7582487280388	963.5019445228776	2	482.7583923339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTQTVFPSK_	ENSG00000156463|ENST00000359120|SH3RF2;ENST00000511705.1_1_5:145435703-145442261:+|nuORF;nc|ENSG00000156463|Q8TEC5-2|SH3RF2;nc|ENSG00000156463|Q8TEC5-3|SH3RF2	109.43880257439609	0.029570636687953285	2				NaN	NaN	0	NaN	5315	3155	8469
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8473	24.97	NaN	4338.5	30	0	1587.2	0.106				-1	 	0	45	344.2247694216125	686.434985910025	2	344.2249450683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5316	3155	8469
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8474	24.972	NaN	9138.9	30	0	769.58	0.106			+	17724	IENKIAVVQDE	11	75	419.89427401494754	1256.6609926450426	3	419.894775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IENKIAVVQDE_	REV__ENSG00000091128|ENST00000388781|LAMB4	73.90049950687481	0.20322248490973555	2				NaN	NaN	0	NaN	5317	3155	8469
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8475	24.973	NaN	3516.2	30	0	449.43	0.036	+			19465	KASEVFLQR	9	67	539.3055822770348	1076.5966116208695	2	539.3065185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KASEVFLQR_	ENSG00000135372|ENST00000257829|NAT10;nc|ENSG00000135372|Q9H0A0-2|NAT10	76.16968421966216	0.11411088698345859	2				NaN	NaN	0	NaN	5318	3155	8469
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8476	24.974	NaN	4436.9	30	0	932.47	0.139				-1	VATLWMDK	8	60	490.2497990927273	978.4850452522546	2	490.24725341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_VATLWM(Oxidation (M))DK_	nc|ENSG00000157326|Q9BTZ2-3|DHRS4	56.72105179125745	0.5342425954139568	2				NaN	NaN	0	NaN	5319	3155	8469
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8488	25.002	NaN	42155	30	0	12723	0.214	+			39936	STMGYMAAK	9	82	480.2191262834062	958.4236996336124	2	480.21966552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STMGYMAAK_	ENSG00000080824|ENST00000216281|HSP90AA1;ENST00000436135.1_1_1:158495283-158495625:+|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1	180.92599232761785	0.0012030822705978085	2				NaN	NaN	0	NaN	5328	3158	8487
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8489	25.005	NaN	19682	30	0	6886.6	0.106	+			4309	ATGKLFAVK	9	84	467.78895510591445	933.5633572786289	2	467.7894592285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATGKLFAVK_	ENSG00000183049|ENST00000619168|CAMK1D;nc|ENSG00000183049|Q8IU85-2|CAMK1D	109.47833844074708	0.029530294723441826	2				NaN	NaN	0	NaN	5329	3158	8487
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8490	25.007	NaN	9964	30	0	1326.9	0.106	+			27888	MTMDRPLSH	9	82	544.2539450121176	1086.493337091035	2	544.2553100585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MTMDRPLSH_	ENSG00000185950|ENST00000375856|IRS2	106.68306549817024	0.032382560583716295	2				NaN	NaN	0	NaN	5330	3158	8487
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8491	25.009	NaN	12286	30	0	2150.8	0.106				-1	MSEDSKYVL	9	59	363.1717823291879	1086.4935175877638	3	363.17230224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_M(Oxidation (M))SEDSKYVL_	DENND4A|p.S1755Vfs*10|1|0.47|ENSG00000174485|chr15:65664687-65664687|T/-|frameshift_variant;ENSG00000174485|ENST00000443035|DENND4A;nc|ENSG00000174485|Q7Z401-2|DENND4A;nc|ENSG00000174485|Q7Z401|DENND4A	36.446750945000026	0.4619375763483977	2				NaN	NaN	0	NaN	5331	3158	8487
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8492	25.011	NaN	15193	30	0	2899.5	0.106	+			45076	TVICSTINK	9	81	518.2783653879436	1034.5421778426871	2	518.2793579101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_TVIC(Carbamidomethyl (C))STINK_	ACTR3B-JMJD1C|1|fusion;ENSG00000171988|ENST00000399262|JMJD1C;JMJD1C|p.A2114Cfs*5|1|0.04|ENSG00000171988|chr10:63189399-63189400|-/T|frameshift_variant;JMJD1C|p.I2113Kfs*18|1|0.04|ENSG00000171988|chr10:63189400-63189401|-/TT|frameshift_variant;nc|ENSG00000171988|Q15652-2|JMJD1C;nc|ENSG00000171988|Q15652-3|JMJD1C	85.86182877749512	0.07653218437724067	2				NaN	NaN	0	NaN	5332	3158	8487
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8493	25.013	NaN	5910.2	30	0	599.39	0.106	+			44428	TSLSVSTPK	9	73	460.2576302077707	918.5007074823415	2	460.25830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TSLSVSTPK_	ENSG00000136021|ENST00000360820|SCYL2;ENST00000392253.2_1_2:202275598-202275970:-|nuORF	70.8162118820467	0.13725933411854815	2				NaN	NaN	0	NaN	5333	3158	8487
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8494	25.014	NaN	6072.6	30	0	1080.5	0.033	+			17085	HSAPVGAQL	9	53	440.2376180909215	878.460683248643	2	440.2373962402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HSAPVGAQL_	ENSG00000164078|ENST00000296474|MST1R;MST1R|p.G755Vfs*19|3|0.19|ENSG00000164078|chr3:49896810-49896810|C/-|frameshift_variant;MST1R|p.S761Pfs*11|1|0.43|ENSG00000164078|chr3:49896794-49896800|ACCAGGT/-|frameshift_variant;nc|ENSG00000164078|Q04912-2|MST1R;nc|ENSG00000164078|Q04912-3|MST1R;nc|ENSG00000164078|Q04912-4|MST1R;nc|ENSG00000164078|Q04912-5|MST1R;nc|ENSG00000164078|Q04912-6|MST1R;nc|ENSG00000164078|Q04912-7|MST1R	62.107414245175825	0.1960472003779324	2				NaN	NaN	0	NaN	5334	3158	8487
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8505	25.04	NaN	7019.7	30	0	1236.2	0.214	+			22566	KTSNLLLSH	9	71	506.7925782673139	1011.5706036014278	2	506.7929382324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTSNLLLSH_	ENSG00000008128|ENST00000404249|CDK11A;ENSG00000248333|ENST00000341832|CDK11B;ENST00000598846.1_1_1:1635046-1639660:-|nuORF;nc|ENSG00000008128|Q9UQ88-10|CDK11A;nc|ENSG00000008128|Q9UQ88-3|CDK11A;nc|ENSG00000008128|Q9UQ88-4|CDK11A;nc|ENSG00000008128|Q9UQ88-5|CDK11A;nc|ENSG00000008128|Q9UQ88-9|CDK11A;nc|ENSG00000008128|Q9UQ88|CDK11A;nc|ENSG00000248333|P21127-10|CDK11B;nc|ENSG00000248333|P21127-12|CDK11B;nc|ENSG00000248333|P21127-3|CDK11B;nc|ENSG00000248333|P21127-4|CDK11B;nc|ENSG00000248333|P21127-5|CDK11B;nc|ENSG00000248333|P21127-6|CDK11B;nc|ENSG00000248333|P21127-8|CDK11B;nc|ENSG00000248333|P21127-9|CDK11B;nc|ENSG00000248333|P21127|CDK11B	114.8945686534367	0.024290463251177924	2				NaN	NaN	0	NaN	5342	3161	8504
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8506	25.043	NaN	13655	30	0	2554.3	0.106	+			37887	SNYNLPMHK	9	75	368.514475969874	1102.521598509822	3	368.51483154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SNYNLPMHK_	ENSG00000174444|ENST00000307961|RPL4;ENST00000422486.1_1_3:185135660-185136437:-|nuORF;ENST00000567229.5_1_15:66791747-66793486:-|nuORF	46.45678178249821	0.34452392205506005	2				NaN	NaN	0	NaN	5343	3161	8504
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8507	25.045	NaN	15499	30	0	3662.3	0.106	+			2818	ASAAASGGLLK	11	79	473.2716510181287	NaN	0	473.2716369628906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASAAASGGLLK_	ENSG00000175073|ENST00000310421|VCPIP1;VCPIP1|p.A460Qfs*2|1|0.36|ENSG00000175073|chr8:66665582-66665582|T/-|frameshift_variant;VCPIP1|p.K1108Nfs*37|1|0.15|ENSG00000175073|chr8:66634846-66634846|T/-|frameshift_variant	117.5257442709337	0.0018453473740108236	2				NaN	NaN	0	NaN	5344	3161	8504
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8508	25.047	NaN	10268	30	0	1336.1	0.106	+			47675	VSDSGAHVL	9	67	442.72681615692693	883.4390793806539	2	442.7270812988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSDSGAHVL_	ENSG00000064102|ENST00000261191|INTS13	102.7733458925114	0.03637199559902695	2				NaN	NaN	0	NaN	5345	3161	8504
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8509	25.049	NaN	5686.6	30	0	3077.2	0.106				-1	 	0	50	425.7239835863161	849.4334142394322	2	425.7242431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5346	3161	8504
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8510	25.051	NaN	2397.5	30	0	274.74	0.106	+			24447	LGEGERAE	8	51	430.7086542935289	859.4027556538579	2	430.7090148925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LGEGERAE_	ENSG00000196220|ENST00000383836|SRGAP3;ENST00000485983.6_1_3:9079745-9122942:-|nuORF;nc|ENSG00000196220|O43295-2|SRGAP3;nc|ENSG00000196220|O43295-3|SRGAP3;SRGAP3|p.N833Tfs*18|1|0.3|ENSG00000196220|chr3:8992966-8992966|T/-|frameshift_variant	30.503639358989545	0.7238069182250283	2				NaN	NaN	0	NaN	5347	3161	8504
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8511	25.053	NaN	2319	30	0	1533.3	0.03				-1	 	0	34	322.1934122737376	642.3722716142752	2	322.1935119628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5348	3161	8504
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8526	25.085	NaN	138040	30	0	42064	0.201				-1	 	0	93	473.7816540296269	945.5487551260538	2	473.7818298339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5360	3164	8525
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8527	25.089	NaN	47568	30	0	22616	0.106	+			4231	ATGDMSGLLK	10	82	504.7546164568871	1007.4946799805742	2	504.7551574707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_ATGDM(Oxidation (M))SGLLK_	ENSG00000127837|ENST00000248450|AAMP;ENST00000475678.5_1_2:219131145-219134809:-|nuORF;ENST00000489767.5_1_2:219130391-219134818:-|nuORF	131.61620852596164	0.01298938390812184	2				NaN	NaN	0	NaN	5361	3164	8525
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8528	25.091	NaN	13452	30	0	1627.6	0.106	+			22186	KSSVNSAVLK	10	82	516.8058561032841	1031.597159273368	2	516.806396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KSSVNSAVLK_	CKAP2L|p.T478Pfs*15|1|0.25|ENSG00000169607|chr2:112752437-112752437|T/-|frameshift_variant;CKAP2L|p.T618Lfs*3|1|0.37|ENSG00000169607|chr2:112740978-112740978|T/-|frameshift_variant;ENSG00000169607|ENST00000302450|CKAP2L;nc|ENSG00000169607|Q8IYA6-3|CKAP2L	90.14881205920913	0.1302219035121668	2				NaN	NaN	0	NaN	5362	3164	8525
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8529	25.092	NaN	12529	30	0	2850.5	0.106			+	9314	EIDMWLWWYRE	11	68	542.917384763588	NaN	0	542.91748046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EIDMWLWWYRE_	REV__ENSG00000132554|ENST00000360863|RGS22;REV__ENST00000520923.5_1_8:101051146-101092499:-|nuORF;REV__nc|ENSG00000132554|Q8NE09-2|RGS22;REV__nc|ENSG00000132554|Q8NE09-3|RGS22;REV__RGS22|p.K914Nfs*18|3|0.3|ENSG00000132554|chr8:100002250-100002250|T/-|frameshift_variant	5.698786898958082	0.456735970842152	2				NaN	NaN	0	NaN	5363	3164	8525
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8530	25.094	NaN	12721	30	0	4380.2	0.106	+			43485	TGPEGHVL	8	68	405.2109954325813	808.4074379319626	2	405.2113952636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TGPEGHVL_	DPYSL3|p.A516Qfs*15|1|0.31|ENSG00000113657|chr5:147395638-147395638|G/-|frameshift_variant;ENSG00000092964|ENST00000521913|DPYSL2;ENSG00000113657|ENST00000343218|DPYSL3;ENSG00000151640|ENST00000338492|DPYSL4;ENST00000521983.1_1_8:26484742-26500445:+|nuORF;nc|ENSG00000092964|Q16555-2|DPYSL2;nc|ENSG00000092964|Q16555|DPYSL2;nc|ENSG00000113657|Q14195|DPYSL3	42.47446043378293	0.6409579893742323	2				NaN	NaN	0	NaN	5364	3164	8525
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8531	25.096	NaN	6478.6	30	0	760.73	0.034	+			38726	SSLGDAINK	9	72	452.73981906865566	903.4650852041113	2	452.7402038574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSLGDAINK_	ENSG00000110080|ENST00000444328|ST3GAL4;nc|ENSG00000110080|Q11206-2|ST3GAL4;nc|ENSG00000110080|Q11206-3|ST3GAL4;nc|ENSG00000110080|Q11206-4|ST3GAL4;nc|ENSG00000110080|Q11206-5|ST3GAL4;nc|ENSG00000110080|Q11206-6|ST3GAL4;nc|ENSG00000110080|Q11206-7|ST3GAL4	96.0336014099291	0.047854655524928534	2				NaN	NaN	0	NaN	5365	3164	8525
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8545	25.126	NaN	42087	30	0	14296	0.214	+			46478	VETGVLKPG	9	78	450.262745839221	898.510938745242	2	450.26336669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VETGVLKPG_	ENSG00000156508|ENST00000309268|EEF1A1;ENST00000436459.2_1_9:135895553-135896258:+|nuORF;ENST00000450915.1_1_7:88268512-88269193:+|nuORF;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	107.00750918261382	0.032051501805654005	2				NaN	NaN	0	NaN	5376	3167	8544
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8546	25.129	NaN	34087	30	0	4381.1	0.106	+			24083	LEKGKETLL	9	91	515.810415703344	1029.606278473488	2	515.8110961914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LEKGKETLL_	ENSG00000204592|ENST00000376630|HLA-E	157.3448221729694	0.005157168637584854	2				NaN	NaN	0	NaN	5377	3167	8544
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8547	25.131	NaN	13363	30	0	4656.5	0.106				-1	GTLMWHQMK	9	59	383.18392433981313	1146.5299436196394	3	383.1844787597656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_GTLMWHQM(Oxidation (M))K_	ENST00000346169.6_1_3:184032401-184033585:+|nuORF;ENST00000352767.7_2_3:184032446-184033585:+|nuORF	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	5378	3167	8544
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8548	25.133	NaN	7063.3	30	0	1460	0.106				-1	 	0	76	427.71588119444505	853.4172094556901	2	427.7162170410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5379	3167	8544
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8549	25.135	NaN	41307	30	0	7441.2	0.106	+			43217	TEVKSVEM	8	90	461.7304834076571	921.4464138821143	2	461.73095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TEVKSVEM_	ENSG00000101210|ENST00000217182|EEF1A2;ENSG00000156508|ENST00000309268|EEF1A1;ENST00000436459.2_1_9:135895553-135896258:+|nuORF;ENST00000447052.1_1_21:24762753-24763314:+|nuORF;ENST00000547505.2_1_12:44054314-44054545:+|nuORF;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	110.11987700582712	0.24509564897437786	2				NaN	NaN	0	NaN	5380	3167	8544
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8550	25.137	NaN	2681.1	30	0	213.87	0.037			+	8788	EEIRATATEI	10	66	566.7952554394141	1131.575957945628	2	566.796142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EEIRATATEI_	REV__ENSG00000127946|ENST00000336926|HIP1;REV__nc|ENSG00000127946|O00291-4|HIP1	39.252832667884924	0.5560298534376815	2				NaN	NaN	0	NaN	5381	3167	8544
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8551	25.137	NaN	4310.1	30	0	202.94	0.14				-1	 	0	68	464.812734284461	927.610915635722	2	464.81298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5382	3167	8544
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8568	25.174	NaN	92325	30	0	23064	0.214			+	44623	TTEWRGGL	8	91	460.23615219156005	918.4577514499201	2	460.2366638183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTEWRGGL_	REV__ENST00000381813.4_1_2:10198012-10198201:-|nuORF	88.64286706044652	0.2815785716369046	2				NaN	NaN	0	NaN	5396	3170	8567
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8569	25.178	NaN	30958	30	0	11124	0.106	+			1973	AIYKTPPGIQK	11	90	405.907651125672	1214.701123977216	3	405.9079284667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AIYKTPPGIQK_	BCOR|p.K1061Sfs*52|1|0.28|ENSG00000183337|chrX:40071029-40071029|T/-|frameshift_variant;BCOR|p.K839Qfs*5|1|0.26|ENSG00000183337|chrX:40072831-40072832|-/G|frameshift_variant;BCOR|p.K839Sfs*17|1|0.41|ENSG00000183337|chrX:40072832-40072832|G/-|frameshift_variant;BCOR|p.L1646Sfs*28|1|0.06|ENSG00000183337|chrX:40053926-40053926|G/-|frameshift_variant;BCOR|p.L487Hfs*13|1|0.67|ENSG00000183337|chrX:40073886-40073887|-/GTGT|frameshift_variant;BCOR|p.N529Tfs*60|1|0.51|ENSG00000183337|chrX:40073760-40073760|T/-|frameshift_variant;BCOR|p.P1621Qfs*53|2|0.52|ENSG00000183337|chrX:40054000-40054000|G/-|frameshift_variant;BCOR|p.R1215Kfs*30|1|0.14|ENSG00000183337|chrX:40063811-40063812|-/T|frameshift_variant;ENSG00000183337|ENST00000378444|BCOR;ENST00000490976.5_1_X:39931586-39937182:-|nuORF;nc|ENSG00000183337|Q6W2J9-2|BCOR;nc|ENSG00000183337|Q6W2J9-3|BCOR;nc|ENSG00000183337|Q6W2J9-4|BCOR	84.31045756130733	0.12206600909821903	2				NaN	NaN	0	NaN	5397	3170	8567
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8570	25.18	NaN	34062	30	0	20135	0.106	+			15639	GVLGSSKVLAK	11	57	353.55682185313555	1057.6486361596067	3	353.55706787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GVLGSSKVLAK_	ENSG00000160216|ENST00000291572|AGPAT3;nc|ENSG00000160216|Q9NRZ7-2|AGPAT3;nc|ENSG00000160216|Q9NRZ7-3|AGPAT3	45.908116695636124	0.4771019740774998	2				NaN	NaN	0	NaN	5398	3170	8567
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8571	25.182	NaN	9121.5	30	0	2952.6	0.106			+	3171	ASIQLLASPK	10	61	343.2094352760306	1026.606476428292	3	343.20965576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASIQLLASPK_	REV__ENSG00000188897|ENST00000696174|unknown	19.1035232394073	0.7193765342308498	2				NaN	NaN	0	NaN	5399	3170	8567
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8572	25.184	NaN	8929.8	30	0	695.54	0.106	+			1370	AEVKEKVVL	9	77	507.8128412861575	1013.611129639115	2	507.81329345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEVKEKVVL_	ENSG00000118898|ENST00000345988|PPL;PPL|p.K1530Gfs*18|1|0.27|ENSG00000118898|chr16:4884058-4884068|GCTCGCGCTTG/-|frameshift_variant	83.6470233535746	0.08277643980271215	2				NaN	NaN	0	NaN	5400	3170	8567
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8573	25.185	NaN	20401	30	0	6818.6	0.038				-1	 	0	70	398.8990803241245	1193.6754115725735	3	398.8995666503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5401	3170	8567
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8574	25.186	NaN	2552.1	30	0	209.85	0.14	+			50382	YAACQSHAF	9	75	527.7233915561122	1053.4322301790244	2	527.724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_YAAC(Carbamidomethyl (C))QSHAF_	ENSG00000244187|ENST00000290079|TMEM141;ENST00000465017.5_1_9:139685862-139687281:+|nuORF;ENST00000489739.1_1_9:139685858-139686514:+|nuORF	62.107414245175825	0.1960472003779324	2				NaN	NaN	0	NaN	5402	3170	8567
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8589	25.219	NaN	27524	30	0	4055	0.214			+	8672	EDTVIPPES	9	81	493.73745800458715	985.4603630759743	2	493.73785400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EDTVIPPES_	REV__ENSG00000061987|ENST00000393630|MON2;REV__ENST00000547095.5_1_12:62864501-62986526:+|nuORF;REV__ENST00000551307.5_1_12:62954224-62986526:+|nuORF;REV__MON2|p.T1274Qfs*3|1|0.36|ENSG00000061987|chr12:62560894-62560894|T/-|frameshift_variant;REV__MON2|p.V1435Afs*17|1|0.03|ENSG00000061987|chr12:62566430-62566431|-/CATCT|frameshift_variant;REV__nc|ENSG00000061987|Q7Z3U7-2|MON2;REV__nc|ENSG00000061987|Q7Z3U7-3|MON2;REV__nc|ENSG00000061987|Q7Z3U7-5|MON2;REV__nc|ENSG00000061987|Q7Z3U7-6|MON2	60.97194046774394	0.20551255781574032	2				NaN	NaN	0	NaN	5414	3173	8588
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8590	25.223	NaN	30941	30	0	15385	0.106			+	28263	NDNIYKEY	8	74	529.7437364785129	1057.4729200238257	2	529.7451782226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NDNIYKEY_	REV__tr|U7T2A1|U7T2A1_FUSNUDhaLdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00636PE=4SV=1	60.97194046774394	0.49215940876911696	2				NaN	NaN	0	NaN	5415	3173	8588
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8591	25.225	NaN	8780.2	30	0	1046.8	0.106				-1	 	0	74	484.78480860006425	967.5550642669285	2	484.78521728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5416	3173	8588
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8592	25.227	NaN	13717	30	0	3923.5	0.106	+			22444	KTLEDFRVK	9	64	379.2201354331496	1134.6385768996488	3	379.22052001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTLEDFRVK_	ENSG00000125991|ENST00000348547|ERGIC3;ENST00000486268.5_1_20:34129846-34130758:+|nuORF;nc|ENSG00000125991|Q9Y282-2|ERGIC3;nc|ENSG00000125991|Q9Y282-3|ERGIC3	49.536043120802724	0.308405419312776	2				NaN	NaN	0	NaN	5417	3173	8588
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8593	25.229	NaN	10150	30	0	2881	0.106			+	17028	HPVKLPSR	8	71	467.2845765390149	NaN	0	467.28466796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HPVKLPSR_	REV__ENST00000336349.5_1_11:18637321-18637366:-|nuORF	30.503639358989545	1.7418937515398478	2				NaN	NaN	0	NaN	5418	3173	8588
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8594	25.23	NaN	2572.2	30	0	305.38	0.036	+			49200	VVMVNQGLTK	10	64	552.8079467209051	NaN	0	552.8081665039062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_VVM(Oxidation (M))VNQGLTK_	ENSG00000134057|ENST00000256442|CCNB1	76.16968421966216	0.118310876128328	2				NaN	NaN	0	NaN	5419	3173	8588
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8595	25.231	NaN	12529	30	0	4482.5	0.144	+			3867	ATANMLGIRK	10	60	358.8741548642418	1073.6006351929254	3	358.87445068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATANMLGIRK_	ENSG00000166902|ENST00000300151|MRPL16	27.047317107675042	0.6589519614906109	2				NaN	NaN	0	NaN	5420	3173	8588
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8612	25.268	NaN	9880.9	30	0	2236.4	0.213	+			33122	RENTQTTIKL	10	70	602.3379712069078	1202.6613894806155	2	602.3382568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RENTQTTIKL_	ENSG00000165119|ENST00000376263|HNRNPK;ENST00000485383.1_1_3:96068520-96068997:+|nuORF;nc|ENSG00000165119|P61978-3|HNRNPK;nc|ENSG00000165119|P61978|HNRNPK	104.42354056486148	0.06456012287859861	2				NaN	NaN	0	NaN	5434	3176	8611
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8613	25.272	NaN	9925.8	30	0	1391.5	0.106				-1	LCPAGCGPE	9	76	452.1878591858368	902.3611654384737	2	452.1883850097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LCPAGC(Carbamidomethyl (C))GPE_	ENST00000533173.1_1_8:145676645-145677062:-|nuORF	44.53106598305862	0.36711179743858174	2				NaN	NaN	0	NaN	5435	3176	8611
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8614	25.274	NaN	18727	30	0	2166	0.106			+	34090	RSPTPTSLR	9	89	507.7873336380133	1013.5601143428266	2	507.7879333496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RSPTPTSLR_	REV__ENST00000564529.1_1_15:75165550-75165682:-|nuORF	42.86426827375447	0.38666266728046506	2				NaN	NaN	0	NaN	5436	3176	8611
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8615	25.275	NaN	3763.3	30	0	317.24	0.106	+			19143	IYNHITTRV	9	64	558.8109869726488	1115.6074210120976	2	558.8120727539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IYNHITTRV_	ADD1|p.K718Rfs*11|2|0.23|ENSG00000087274|chr4:2928458-2928458|A/-|frameshift_variant;ENSG00000087274|ENST00000683351|ADD1;ENST00000503169.5_1_4:2877642-2906862:+|nuORF;ENST00000508684.5_1_4:2877642-2900342:+|nuORF;ENST00000509039.5_1_4:2877642-2901297:+|nuORF;nc|ENSG00000087274|P35611-2|ADD1;nc|ENSG00000087274|P35611-3|ADD1;nc|ENSG00000087274|P35611-4|ADD1;nc|ENSG00000087274|P35611-5|ADD1;nc|ENSG00000087274|P35611-6|ADD1;nc|ENSG00000087274|P35611|ADD1	41.42661286455405	0.403525789677298	2				NaN	NaN	0	NaN	5437	3176	8611
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8616	25.277	NaN	9535.6	30	0	2075.7	0.106				-1	ASTIMLLKEQ	10	68	383.8778020430189	1148.6115767292567	3	383.8775939941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_ASTIM(Oxidation (M))LLKEQ_	tr|U7SL52|U7SL52_FUSNUVWFAdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01984PE=4SV=1	31.634271133179894	0.6214930414500597	2				NaN	NaN	0	NaN	5438	3176	8611
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8617	25.279	NaN	4975.8	30	0	834.15	0.036	+			23899	LDKKEPEVL	9	77	535.8075837136423	1069.6006144940845	2	535.80859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LDKKEPEVL_	ENST00000401087.3_3_1:149089877-149094694:-|nuORF	93.5975768576971	0.05472259948179787	2				NaN	NaN	0	NaN	5439	3176	8611
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8618	25.28	NaN	14398	30	0	1449.3	0.141	+			16400	HEQSRIITV	9	84	541.8007514380726	1081.586949942945	2	541.8013916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HEQSRIITV_	ENSG00000158006|ENST00000374282|PAFAH2	123.20810148215591	0.019257656778428764	2				NaN	NaN	0	NaN	5440	3176	8611
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8633	25.313	NaN	60145	30	0	12905	0.214	+			6230	AVSARLLN	8	77	422.2553186242945	842.496084315389	2	422.2558898925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVSARLLN_	ENST00000601800.5_1_19:49982251-49989456:+|nuORF	84.9155231211612	0.2928622555056503	2				NaN	NaN	0	NaN	5452	3179	8632
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8634	25.317	NaN	23155	30	0	7224.2	0.106	+			10239	ETITKETKF	9	86	366.20076702093866	1095.580471663016	3	366.2010192871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ETITKETKF_	ZNF471|p.E158K|1|0.06|ENSG00000196263|chr19:56524539-56524539|G/A|missense_variant	38.80614096846853	0.43426287593479557	2				NaN	NaN	0	NaN	5453	3179	8632
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8635	25.319	NaN	13199	30	0	3722.9	0.106	+			27495	MMHRVWLE	8	72	551.2708258806524	1100.5270988281047	2	551.2718505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MMHRVWLE_	ENST00000280979.8_2_14:33293035-33293080:+|nuORF	52.29916861842294	0.578018602984656	2				NaN	NaN	0	NaN	5454	3179	8632
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8636	25.321	NaN	9537.8	30	0	2614.1	0.106				-1	 	0	63	438.26298945749096	874.5114259817819	2	438.2633056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5455	3179	8632
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8637	25.322	NaN	6989.6	30	0	621.27	0.106	+			16184	HEAPGTFRV	9	79	507.26165728975553	1012.5087616463111	2	507.26177978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HEAPGTFRV_	ENSG00000163840|ENST00000296161|DTX3L;nc|ENSG00000163840|Q8TDB6-2|DTX3L	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	5456	3179	8632
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8638	25.324	NaN	2764.5	30	0	725.75	0.037	+			1242	AERMLGNAAPL	11	44	381.53723401528015	1141.5898726460405	3	381.5376281738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AERMLGNAAPL_	ENSG00000050555|ENST00000361069|LAMC3	29.550750289552195	0.6798279264880025	2				NaN	NaN	0	NaN	5457	3179	8632
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8639	25.325	NaN	3244.4	30	0	553.9	0.139			+	32565	QVVSPVEHA	9	62	483.25558408807524	964.4966152429505	2	484.7614440917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QVVSPVEHA_	REV__DNAH5|p.F4486Lfs*7|2|0.23|ENSG00000039139|chr5:13701317-13701317|A/-|frameshift_variant;REV__DNAH5|p.G1976Efs*78|3|0.44|ENSG00000039139|chr5:13830731-13830731|C/-|frameshift_variant;REV__DNAH5|p.I1855Sfs*16|1|0.33|ENSG00000039139|chr5:13841052-13841052|T/-|frameshift_variant;REV__DNAH5|p.I2945Rfs*76|1|0.07|ENSG00000039139|chr5:13780948-13780949|-/CATTTCTCTT|frameshift_variant;REV__DNAH5|p.I4068*|1|0.07|ENSG00000039139|chr5:13721077-13721077|T/-|frameshift_variant;REV__DNAH5|p.P3316Lfs*22|3|0.33|ENSG00000039139|chr5:13766130-13766130|G/-|frameshift_variant;REV__ENSG00000039139|ENST00000265104|DNAH5	26.69291269510374	0.5537881896960711	2				NaN	NaN	0	NaN	5458	3179	8632
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8653	25.355	NaN	22822	30	0	3637.7	0.214				-1	 	0	77	491.78146299358053	981.5483730539611	2	491.78173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5469	3182	8652
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8654	25.359	NaN	14273	30	0	3194.7	0.106				-1	 	0	71	488.2295080181791	974.4444631031582	2	488.22991943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5470	3182	8652
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8655	25.361	NaN	18748	30	0	3505.5	0.106	+			44054	TPREKAHY	8	81	501.2609774309502	1000.5074019287005	2	501.26153564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TPREKAHY_	LMOD2|p.K405Qfs*119|1|0.49|ENSG00000170807|chr7:123662794-123662795|-/C|frameshift_variant	38.80614096846853	0.6637206697844082	2				NaN	NaN	0	NaN	5471	3182	8652
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8656	25.363	NaN	7733.5	30	0	1261.9	0.106	+			33762	RPTEFVNHY	9	76	581.7853234892826	1161.5560940453652	2	581.7857666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RPTEFVNHY_	ENSG00000139567|ENST00000388922|ACVRL1	35.15202426646627	0.4747332964206883	2				NaN	NaN	0	NaN	5472	3182	8652
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8657	25.364	NaN	6768.6	30	0	429.08	0.106	+			11058	FEQKAAQL	8	63	467.7530665286016	NaN	0	467.7528991699219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FEQKAAQL_	EEA1|p.K257Nfs*13|2|0.34|ENSG00000102189|chr12:92851138-92851138|T/-|frameshift_variant;EEA1|p.N1389Mfs*3|1|0.33|ENSG00000102189|chr12:92776081-92776081|T/-|frameshift_variant;ENSG00000102189|ENST00000322349|EEA1	64.20726635412375	1.7418937515398478	2				NaN	NaN	0	NaN	5473	3182	8652
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8658	25.366	NaN	3700	30	0	662.57	0.106	+			15735	GVSAAIYSK	9	56	448.2472023519671	894.4798517707342	2	448.2473449707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GVSAAIYSK_	ENSG00000123146|ENST00000242786|ADGRE5;nc|ENSG00000123146|P48960-2|ADGRE5;nc|ENSG00000123146|P48960-3|ADGRE5	75.04331003522576	0.118981335847003	2				NaN	NaN	0	NaN	5474	3182	8652
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8659	25.368	NaN	4359.6	30	0	1464.8	0.036				-1	 	0	35	351.2011076695252	1050.5814936087756	3	351.2013244628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5475	3182	8652
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8673	25.398	NaN	19505	30	0	4370.1	0.214	+			43505	TGSETKITY	9	82	500.25318408626276	NaN	0	500.2531433105469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TGSETKITY_	ENSG00000174197|ENST00000703841|MGA;ENST00000566288.1_1_15:42040980-42042834:+|nuORF;MGA|p.D2578Rfs*45|1|0.32|ENSG00000174197|chr15:41762342-41762343|-/A|frameshift_variant;MGA|p.S2228Kfs*5|1|0.33|ENSG00000174197|chr15:41750284-41750285|-/A|frameshift_variant;nc|ENSG00000174197|Q8IWI9-3|MGA;nc|ENSG00000174197|Q8IWI9|MGA	63.42647028704847	0.13470499157941143	2				NaN	NaN	0	NaN	5486	3185	8672
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8674	25.402	NaN	23040	30	0	3215.3	0.106	+			15459	GTYVSSVPR	9	74	483.25558408807524	964.4966152429505	2	483.25592041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTYVSSVPR_	ENSG00000204252|ENST00000229829|HLA-DOA;ENST00000485901.1_1_6:32974617-32975137:-|nuORF	120.8684288430529	0.02067403653475984	2				NaN	NaN	0	NaN	5487	3185	8672
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8675	25.403	NaN	6997.1	30	0	2027.3	0.106			+	34427	RTVGVAGLA	9	64	422.2553186242945	842.496084315389	2	423.25799560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RTVGVAGLA_	REV__ENSG00000196968|ENST00000372841|FUT11;REV__FUT11|p.R107Pfs*169|1|0.38|ENSG00000196968|chr10:73772649-73772650|-/C|frameshift_variant;REV__nc|ENSG00000196968|Q495W5-2|FUT11	55.50420428727701	0.2510918378945873	2				NaN	NaN	0	NaN	5488	3185	8672
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8676	25.405	NaN	16056	30	0	3196.2	0.106	+			15316	GTVIHFNNPK	10	77	563.8031563503561	1125.591759767512	2	563.8042602539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTVIHFNNPK_	ENSG00000134717|ENST00000313334|BTF3L4;ENSG00000145741|ENST00000380591|BTF3;nc|ENSG00000134717|Q96K17-2|BTF3L4;nc|ENSG00000145741|P20290-2|BTF3	180.86945649972546	0.0011497977138230557	2				NaN	NaN	0	NaN	5489	3185	8672
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8677	25.407	NaN	11973	30	0	4824.2	0.106				-1	 	0	44	342.198777841812	1023.5745041256359	3	342.1990051269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5490	3185	8672
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8678	25.409	NaN	5355.2	30	0	890.14	0.106	+			724	AEAVRTTL	8	63	430.7454677698353	859.4763826064706	2	430.7453308105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEAVRTTL_	ENSG00000135624|ENST00000258091|CCT7;ENST00000461290.5_1_2:73461506-73471178:+|nuORF;ENST00000464397.1_1_2:73461506-73466971:+|nuORF;ENST00000480489.5_1_2:73461506-73470269:+|nuORF	52.936696900407355	0.5717071646657654	2				NaN	NaN	0	NaN	5491	3185	8672
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8679	25.411	NaN	3470.1	30	0	448.11	0.035			+	8736	EEFGAMNKL	9	68	519.7509018384369	1037.4872507436737	2	519.7518310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EEFGAMNKL_	REV__ENSG00000164299|ENST00000296739|SPZ1;REV__SPZ1|p.D78Y|1|0.29|ENSG00000164299|chr5:80320447-80320447|G/T|missense_variant;REV__SPZ1|p.Q290Lfs*9|1|0.03|ENSG00000164299|chr5:80321078-80321079|-/TTTTTTGCTT|frameshift_variant;REV__SPZ1|p.V219Sfs*3|1|0.27|ENSG00000164299|chr5:80320861-80320862|-/A|frameshift_variant	45.9519527083369	0.35044536499095585	2				NaN	NaN	0	NaN	5492	3185	8672
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8691	25.436	NaN	20780	30	0	2327	0.214			+	45392	TVTQIPLTQ	9	90	500.7870038328939	999.5594547325878	2	500.78729248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVTQIPLTQ_	REV__ENSG00000165617|ENST00000395153|DACT1;REV__nc|ENSG00000165617|Q9NYF0|DACT1	56.43379154798735	0.2433427591689151	2				NaN	NaN	0	NaN	5501	3188	8690
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8692	25.439	NaN	15925	30	0	1286.2	0.106	+			10458	EVNPNTRVM	9	79	530.265447355619	1058.516341778038	2	530.2667236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EVNPNTRVM_	ENSG00000123353|ENST00000243045|ORMDL2;ENSG00000128699|ENST00000392349|ORMDL1;ENSG00000172057|ENST00000304046|ORMDL3;nc|ENSG00000172057|Q8N138-4|ORMDL3	158.07458414430337	0.004987072822166904	2				NaN	NaN	0	NaN	5502	3188	8690
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8693	25.441	NaN	10074	30	0	2227.3	0.106	+			45210	TVNSPAIYK	9	72	496.7736665153107	991.5327800974214	2	496.77410888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVNSPAIYK_	ENSG00000183520|ENST00000373014|UTP11;ENST00000488453.1_1_1:38483328-38489297:+|nuORF	66.96192283764107	0.15557981141143568	2				NaN	NaN	0	NaN	5503	3188	8690
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8694	25.443	NaN	7413.4	30	0	2174.7	0.106			+	-1	DEDIDYLNG	9	60	548.2274937460194	1094.4404345588387	2	548.2286376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))DEDIDYLNG_	REV__ENSG00000183454|ENST00000330684|GRIN2A;REV__GRIN2A|p.R1241Q|1|0.38|ENSG00000183454|chr16:9763822-9763822|C/T|missense_variant;REV__GRIN2A|p.S1341Afs*56|4|0.26|ENSG00000183454|chr16:9763523-9763523|T/-|frameshift_variant;REV__nc|ENSG00000183454|Q12879-2|GRIN2A	37.15910966729921	0.4535818937225704	2				NaN	NaN	0	NaN	5504	3188	8690
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8695	25.445	NaN	10076	30	0	2113.9	0.106	+			8441	EARKQVEVF	9	66	553.3037095787536	1104.592866224307	2	553.3040161132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EARKQVEVF_	ENSG00000100911|ENST00000216802|PSME2;ENST00000471700.6_1_14:24612807-24615772:-|nuORF;ENST00000558931.5_1_14:24615401-24615790:-|nuORF;ENST00000559493.5_1_14:24614434-24615772:-|nuORF;ENST00000560592.5_1_14:24614852-24615790:-|nuORF	112.10723106719422	0.02684780151337622	2				NaN	NaN	0	NaN	5505	3188	8690
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8696	25.446	NaN	5031.6	30	0	654.79	0.106	+			35192	SAISPKSSL	9	69	445.2537968659456	888.4930407986913	2	445.2530517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SAISPKSSL_	ENSG00000144161|ENST00000409573|ZC3H8	88.17693792209575	0.07000514020414955	2				NaN	NaN	0	NaN	5506	3188	8690
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8697	25.448	NaN	7137.2	30	0	1072.6	0.035	+			33255	RGERSCYR	8	65	513.7498356095288	NaN	0	513.749755859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RGERSCYR_	ENSG00000122257|ENST00000319715|RBBP6;nc|ENSG00000122257|Q7Z6E9-2|RBBP6;RBBP6|p.A1062Pfs*49|2|0.3|ENSG00000122257|chr16:24569868-24569868|A/-|frameshift_variant;RBBP6|p.D1432Vfs*9|1|0.04|ENSG00000122257|chr16:24571360-24571361|-/TTTTCCCTTTTTC|frameshift_variant;RBBP6|p.N1351Mfs*9|1|0.45|ENSG00000122257|chr16:24571113-24571113|A/-|frameshift_variant;RBBP6|p.R1089Qfs*6|1|0.18|ENSG00000122257|chr16:24569949-24569950|-/C|frameshift_variant;RBBP6|p.R939Efs*11|1|0.32|ENSG00000122257|chr16:24569501-24569501|A/-|frameshift_variant;RBBP6|p.T1475Lfs*20|1|0.3|ENSG00000122257|chr16:24571483-24571483|A/-|frameshift_variant	44.116797842482775	1.7418937515398478	2				NaN	NaN	0	NaN	5507	3188	8690
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8710	25.476	NaN	33006	30	0	8238.4	0.214			+	16731	HLLNLKAE	8	79	469.27655794276177	936.5385629523236	2	469.2766418457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HLLNLKAE_	REV__ENSG00000169918|ENST00000307050|OTUD7A;REV__nc|ENSG00000169918|Q8TE49|OTUD7A;REV__OTUD7A|p.V467Cfs*62|1|0.44|ENSG00000169918|chr15:31484676-31484676|C/-|frameshift_variant	74.25504064058377	0.37144338840759816	2				NaN	NaN	0	NaN	5517	3191	8709
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8711	25.48	NaN	20392	30	0	4749.7	0.106	+			39097	SSSTVSYLK	9	73	486.2553492277713	970.4961455223427	2	486.25531005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSSTVSYLK_	ABCA1|p.L2013*|1|0.14|ENSG00000165029|chr9:104788457-104788457|A/-|frameshift_variant;ENSG00000165029|ENST00000374736|ABCA1	117.81106730687013	0.02252488733980868	2				NaN	NaN	0	NaN	5518	3191	8709
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8712	25.481	NaN	7856.2	30	0	876.43	0.106	+			38827	SSNDWNVEK	9	70	539.7429914842016	1077.4714300352032	2	539.7439575195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSNDWNVEK_	ENSG00000151348|ENST00000533608|EXT2;EXT2|p.D82Ifs*30|1|0.43|ENSG00000151348|chr11:44107951-44107951|G/-|frameshift_variant;EXT2|p.N517Tfs*3|1|0.49|ENSG00000151348|chr11:44206844-44206844|A/-|frameshift_variant;nc|ENSG00000151348|Q93063-2|EXT2;nc|ENSG00000151348|Q93063-3|EXT2	139.38205640894643	0.01076996779551382	2				NaN	NaN	0	NaN	5519	3191	8709
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8713	25.483	NaN	5250.2	30	0	882.05	0.106				-1	 	0	68	464.7110894195142	927.4076259058285	2	464.7113342285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5520	3191	8709
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8714	25.485	NaN	4595.3	30	0	863.49	0.106	+			5564	AVAQAIMSK	9	67	459.7566007949547	917.4986486567094	2	459.75714111328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVAQAIMSK_	ENSG00000099998|ENST00000327365|GGT5;nc|ENSG00000099998|P36269-2|GGT5;nc|ENSG00000099998|P36269-3|GGT5	76.16968421966216	0.11411088698345859	2				NaN	NaN	0	NaN	5521	3191	8709
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8715	25.487	NaN	4504.1	30	0	1608.8	0.036	+			16826	HPDSRAIMY	9	72	545.2602349359124	1088.5059169386248	2	545.2610473632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HPDSRAIMY_	ENSG00000116062|ENST00000234420|MSH6;MSH6|p.F882Lfs*24|1|0.31|ENSG00000116062|chr2:47800626-47800626|T/-|frameshift_variant;MSH6|p.G1105Wfs*3|2|0.25|ENSG00000116062|chr2:47803552-47803553|-/T|frameshift_variant;nc|ENSG00000116062|P52701-2|MSH6;nc|ENSG00000116062|P52701-3|MSH6;nc|ENSG00000116062|P52701-4|MSH6	82.24051045832904	0.08786059719216216	2				NaN	NaN	0	NaN	5522	3191	8709
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8716	25.487	NaN	32293	30	0	3380.7	0.139	+			10743	FAEGQGRAL	9	82	474.7481347397134	947.4817165462268	2	474.7484436035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FAEGQGRAL_	ENSG00000103335|ENST00000301015|PIEZO1;PIEZO1|p.A2395Pfs*117|1|0.37|ENSG00000103335|chr16:88716061-88716067|CCCCGCA/-|frameshift_variant;PIEZO1|p.F1977Lfs*33|1|0.38|ENSG00000103335|chr16:88720403-88720403|A/-|frameshift_variant	107.00750918261382	0.032051501805654005	2				NaN	NaN	0	NaN	5523	3191	8709
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8730	25.519	NaN	43217	30	0	9042.7	0.207			+	44997	TVEDRGQKK	9	88	530.791674082199	1059.568795231198	2	530.7932739257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVEDRGQKK_	REV__ENST00000485230.5_2_3:112970233-112970398:+|nuORF	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	5534	3194	8729
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8731	25.522	NaN	19669	30	0	1437.6	0.106	+			43223	TEVLKTHGL	9	89	499.28698900646197	996.559425079724	2	499.2874450683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEVLKTHGL_	ENSG00000142541|ENST00000391857|RPL13A	96.66504779109242	0.04607440320619715	2				NaN	NaN	0	NaN	5535	3194	8729
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8732	25.524	NaN	44248	30	0	7074.9	0.106			+	42072	SYDTFHVSK	9	87	542.2595864692964	1082.5046200053928	2	542.260986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SYDTFHVSK_	REV__ENSG00000163701|ENST00000383814|IL17RE;REV__ENST00000383815.7_1_3:9944714-9956386:+|nuORF;REV__nc|ENSG00000163701|Q8NFR9-2|IL17RE;REV__nc|ENSG00000163701|Q8NFR9-3|IL17RE;REV__nc|ENSG00000163701|Q8NFR9-4|IL17RE	60.97194046774394	0.20551255781574032	2				NaN	NaN	0	NaN	5536	3194	8729
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8733	25.526	NaN	21138	30	0	8522.4	0.106				-1	 	0	74	440.24999247647065	878.4854320197413	2	440.250244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5537	3194	8729
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8734	25.528	NaN	6879.2	30	0	1873	0.106				-1	 	0	61	425.2626597638447	848.5107665944894	2	425.26312255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5538	3194	8729
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8735	25.53	NaN	11925	30	0	4668.3	0.106			+	45335	TVSITPPTSK	10	73	515.7923943832238	1029.5702358332476	2	515.7925415039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TVSITPPTSK_	REV__ENST00000322315.5_1_19:3590178-3593283:+|nuORF	33.921630207806714	0.6028135429846169	2				NaN	NaN	0	NaN	5539	3194	8729
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8736	25.532	NaN	19941	30	0	1937	0.037				-1	 	0	94	367.9092719645001	1100.7059864937003	3	367.909423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5540	3194	8729
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8753	25.567	NaN	26112	30	0	3170.9	0.214	+			30706	QDELLYAR	8	87	504.26030103483816	1006.5060491364763	2	504.2604675292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QDELLYAR_	ENSG00000186648|ENST00000342740|CARMIL3;ENST00000559694.5_1_14:24526437-24530034:+|nuORF;nc|ENSG00000186648|Q8ND23-3|CARMIL3	78.26377905018397	0.3380406943192529	2				NaN	NaN	0	NaN	5554	3197	8752
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8754	25.57	NaN	10530	30	0	1639.4	0.106				-1	 	0	76	551.3602125678223	1100.7058722024444	2	551.3610229492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5555	3197	8752
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8755	25.572	NaN	6769.8	30	0	1890.4	0.106			+	2723	AQTIEKTY	8	68	477.25009144332085	952.4856299534417	2	477.2503662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AQTIEKTY_	REV__tr|U7SU65|U7SU65_FUSNUHomoserinedehydrogenaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01320PE=3SV=1	87.75429964447693	0.2842685068779738	2				NaN	NaN	0	NaN	5556	3197	8752
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8756	25.574	NaN	11881	30	0	6270.5	0.106				-1	 	0	54	436.7448792653913	871.4752055975827	2	436.7452697753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5557	3197	8752
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8757	25.576	NaN	8574.2	30	0	1034.8	0.106	+			32956	REDKPPLAV	9	72	512.7925650550927	1023.5705771769855	2	512.7930297851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_REDKPPLAV_	ENSG00000004399|ENST00000324093|PLXND1;ENST00000512807.1_1_3:129278266-129279214:-|nuORF;nc|ENSG00000004399|Q9Y4D7-2|PLXND1;PLXND1|p.T1897Rfs*17|1|0.06|ENSG00000004399|chr3:129556402-129556402|G/-|frameshift_variant	50.033510581677724	0.3025703251535696	2				NaN	NaN	0	NaN	5558	3197	8752
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8758	25.578	NaN	5878.3	30	0	1943.8	0.106				-1	 	0	47	396.24187049397375	790.4691880547475	2	396.24224853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5559	3197	8752
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8759	25.58	NaN	11093	30	0	1004.5	0.036	+			51239	YQEKGVRVL	9	78	546.3135463621835	1090.612539791167	2	546.3145751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YQEKGVRVL_	ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2	101.25262130126117	0.03792372629710479	2				NaN	NaN	0	NaN	5560	3197	8752
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8771	25.605	NaN	26992	30	0	4242.4	0.214				-1	 	0	84	458.2602005258376	914.5058481184752	2	458.2606201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5569	3200	8770
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8772	25.609	NaN	12637	30	0	2977.9	0.106				-1	 	0	66	430.2471922960662	858.4798316589324	2	430.24761962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5570	3200	8770
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8773	25.611	NaN	4857	30	0	3196.3	0.106	+			2204	ALPTTQFHK	9	34	348.19391523916676	1041.5599163177003	3	348.1941223144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ALPTTQFHK_	ENST00000467638.1_1_7:139757417-139762332:-|nuORF	30.503639358989545	0.5181749237905803	2				NaN	NaN	0	NaN	5571	3200	8770
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8774	25.613	NaN	8569.7	30	0	1769	0.106	+			38416	SSAGPGLLK	9	68	415.2421167857935	828.469680638387	2	415.242431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSAGPGLLK_	CON__P08729;CON__Q3KNV1;ENSG00000135480|ENST00000331817|KRT7;ENST00000549638.1_1_12:52641943-52642541:+|nuORF;ENST00000550153.1_1_12:52641566-52642541:+|nuORF;ENST00000552322.5_1_12:52638288-52642544:+|nuORF	68.78682469695295	0.14603441672067394	2				NaN	NaN	0	NaN	5572	3200	8770
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8775	25.614	NaN	8072.8	30	0	1252.1	0.106	+			35673	SDFLQKQE	8	75	497.7453013702569	993.4760498073139	2	497.7457275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SDFLQKQE_	ENST00000462785.1_1_2:112526870-112536431:-|nuORF	58.78195531508484	0.5138399468736706	2				NaN	NaN	0	NaN	5573	3200	8770
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8776	25.616	NaN	13327	30	0	3528.5	0.035				-1	 	0	71	499.80827481189976	997.6019966905995	2	499.8086853027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5574	3200	8770
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8777	25.617	NaN	5070.3	30	0	772.52	0.139	+			35850	SEDGDAHVL	9	71	471.7104983899477	941.4064438466954	2	471.71160888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SEDGDAHVL_	ENSG00000141456|ENST00000572293|PELP1	71.29570347882199	0.13518600952103718	2				NaN	NaN	0	NaN	5575	3200	8770
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8790	25.646	NaN	27507	30	0	3416	0.214	+			20276	KENQVIVRM	9	85	558.8123345553895	1115.610116177579	2	558.8135375976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KENQVIVRM_	ENSG00000104413|ENST00000433389|ESRP1;ESRP1|p.L333Sfs*55|1|0.35|ENSG00000104413|chr8:94668009-94668009|G/-|frameshift_variant;ESRP1|p.N512Hfs*7|2|0.33|ENSG00000104413|chr8:94674383-94674384|AA/-|frameshift_variant;ESRP1|p.N512Kfs*8|1|0.48|ENSG00000104413|chr8:94674382-94674383|-/A|frameshift_variant;ESRP1|p.N512Tfs*2|2|0.36|ENSG00000104413|chr8:94674383-94674383|A/-|frameshift_variant;nc|ENSG00000104413|Q6NXG1-2|ESRP1;nc|ENSG00000104413|Q6NXG1-3|ESRP1;nc|ENSG00000104413|Q6NXG1-4|ESRP1;nc|ENSG00000104413|Q6NXG1-5|ESRP1	200.15690381979954	3.265422741743988E-05	2				NaN	NaN	0	NaN	5585	3203	8789
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8791	25.65	NaN	26491	30	0	4095.1	0.106				-1	 	0	86	487.79195691901134	973.5693609048227	2	487.7923583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5586	3203	8789
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8792	25.652	NaN	8048.6	30	0	1897.6	0.106	+			44748	TTMQALAEK	9	70	496.7569733595915	991.499393785983	2	496.7574768066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TTMQALAEK_	ENSG00000166037|ENST00000325542|CEP57;ENST00000539855.5_1_11:95532492-95564417:+|nuORF;nc|ENSG00000166037|Q86XR8-2|CEP57;nc|ENSG00000166037|Q86XR8-3|CEP57;nc|ENSG00000166037|Q86XR8-4|CEP57;nc|ENSG00000166037|Q86XR8-5|CEP57	102.0615471778698	0.03709830720253279	2				NaN	NaN	0	NaN	5587	3203	8789
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8793	25.653	NaN	10573	30	0	1811.2	0.106				-1	YVCFLGVVVT	10	64	386.20846148133404	NaN	0	386.2086181640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_YVC(Carbamidomethyl (C))FLGVVVT_	ENSG00000111670|ENST00000299314|GNPTAB;GNPTAB|p.F1228Lfs*5|2|0.13|ENSG00000111670|chr12:101749110-101749110|A/-|frameshift_variant;nc|ENSG00000111670|Q3T906-2|GNPTAB	44.377184641726394	0.34115073642966565	2				NaN	NaN	0	NaN	5588	3203	8789
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8794	25.655	NaN	3776.8	30	0	1407.3	0.106	+			16930	HPMNDPTRTF	10	49	608.2821230236134	1214.5496931140267	2	608.2823486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HPMNDPTRTF_	ENSG00000198715|ENST00000362007|GLMP;ENST00000484214.1_1_1:156263748-156265436:-|nuORF;nc|ENSG00000198715|Q8WWB7-2|GLMP	52.936696900407355	0.4300801048568001	2				NaN	NaN	0	NaN	5589	3203	8789
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8795	25.657	NaN	5038.3	30	0	1198.1	0.037			+	33913	RRSPWGRGGQ	10	70	578.8082296978139	1155.6019064624277	2	578.8090209960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RRSPWGRGGQ_	REV__ENST00000430262.2_1_17:47439361-47439412:-|nuORF	46.45678178249821	0.4896490706773647	2				NaN	NaN	0	NaN	5590	3203	8789
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8796	25.658	NaN	4240	30	0	481.68	0.141	+			23743	LCALDLEL	8	69	445.2396280360602	888.4647031389204	2	445.239990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LCALDLEL_	ENST00000454079.5_1_3:50099151-50099352:+|nuORF	57.452649787351945	0.526999880452039	2				NaN	NaN	0	NaN	5591	3203	8789
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8808	25.685	NaN	13939	30	0	1303	0.214	+			7824	DPVEPHGEM	9	81	505.7152744742996	1009.4159960153992	2	505.71563720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DPVEPHGEM_	ENSG00000130726|ENST00000253024|TRIM28;ENST00000601150.5_1_19:59059168-59060232:+|nuORF;nc|ENSG00000130726|Q13263-2|TRIM28	76.7741389293348	0.11149722112137898	2				NaN	NaN	0	NaN	5600	3206	8807
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8809	25.689	NaN	6281.4	30	0	3897.3	0.106	+			13671	GPAPPTLPRGL	11	57	538.3154702408656	1074.616387548531	2	538.316650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GPAPPTLPRGL_	ENST00000548971.5_1_12:53896913-53899929:+|nuORF	41.080066990542036	0.5431644350485484	2				NaN	NaN	0	NaN	5601	3206	8807
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8810	25.691	NaN	4312	30	0	557.06	0.106			+	9235	EGTHLRRHQ	9	74	567.3004352386819	1132.5863175441636	2	567.3013916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EGTHLRRHQ_	REV__ENSG00000179930|ENST00000339948|ZNF648;REV__ENSG00000204519|ENST00000282296|ZNF551;REV__nc|ENSG00000204519|Q7Z340-2|ZNF551	75.04331003522576	0.118981335847003	2				NaN	NaN	0	NaN	5602	3206	8807
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8811	25.693	NaN	3094.1	30	0	882.49	0.106				-1	 	0	43	344.2246469945969	686.4347410559939	2	344.2248840332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5603	3206	8807
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8812	25.694	NaN	3108.2	30	0	330.93	0.106			+	25260	LNLRLTWAA	9	49	353.20986827373423	1056.6077754214027	3	353.2098388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LNLRLTWAA_	REV__nc|ENSG00000198089|A8K8P3-4|SFI1	18.324413293986947	0.6112419832031293	2				NaN	NaN	0	NaN	5604	3206	8807
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8813	25.696	NaN	2585.8	30	0	410.82	0.037			+	-1	IYPMKMGLL	9	40	361.1972841967729	1080.5700231905187	3	361.19757080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_IYPM(Oxidation (M))KMGLL_	REV__ENSG00000147606|ENST00000276609|SLC26A7;REV__nc|ENSG00000147606|Q8TE54-2|SLC26A7;REV__SLC26A7|p.K333Nfs*20|5|0.37|ENSG00000147606|chr8:91340519-91340519|A/-|frameshift_variant	37.15910966729921	0.4535818937225704	2				NaN	NaN	0	NaN	5605	3206	8807
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8814	25.697	NaN	3541.6	30	0	607.71	0.14	+			47358	VPENTMHAM	9	55	515.2275021594226	1028.440451385645	2	515.228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VPENTMHAM_	ENSG00000072110|ENST00000394419|ACTN1;nc|ENSG00000072110|P12814-2|ACTN1;nc|ENSG00000072110|P12814-4|ACTN1;nc|ENSG00000072110|P12814|ACTN1	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	5606	3206	8807
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8827	25.726	NaN	10963	30	0	3007.6	0.214	+			867	AEHERELAL	9	76	534.2766469437082	1066.5387409542163	2	534.2778930664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEHERELAL_	ENSG00000115306|ENST00000356805|SPTBN1;ENSG00000173898|ENST00000533211|SPTBN2;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1;nc|ENSG00000173898|O15020-2|SPTBN2;SPTBN1|p.K503Rfs*24|1|0.06|ENSG00000115306|chr2:54626095-54626095|G/-|frameshift_variant;SPTBN2|p.P924Qfs*35|1|0.39|ENSG00000173898|chr11:66701629-66701629|G/-|frameshift_variant	96.66504779109242	0.04607440320619715	2				NaN	NaN	0	NaN	5616	3209	8826
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8828	25.73	NaN	7234.9	30	0	649.64	0.106	+			644	AEAEAASVRM	10	76	517.7492355321214	1033.4839181310426	2	517.7501220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEAEAASVRM_	ENSG00000137312|ENST00000376389|FLOT1;ENST00000487376.5_1_6:30695895-30698542:-|nuORF;nc|ENSG00000137312|O75955-2|FLOT1	106.88024417677582	0.05726438866303799	2				NaN	NaN	0	NaN	5617	3209	8826
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8829	25.732	NaN	5128.8	30	0	880.43	0.106			+	23832	LCVKCRIDK	9	71	539.2997791559213	1076.5850053786426	2	539.30078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LCVKCRIDK_	REV__ENST00000590325.1_1_19:13049472-13051084:+|nuORF	55.08391021199286	0.2545954270840753	2				NaN	NaN	0	NaN	5618	3209	8826
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8830	25.733	NaN	5283.9	30	0	789.89	0.106	+			39920	STMDKFNVTK	10	75	585.7936955967004	1169.5728382602008	2	585.7945556640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STMDKFNVTK_	ENSG00000196187|ENST00000366835|TMEM63A	120.27252224102466	0.026944837168485097	2				NaN	NaN	0	NaN	5619	3209	8826
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8831	25.735	NaN	11543	30	0	4371.3	0.106				-1	STLAQPTPVCP	11	62	390.86505105710455	1169.5733237715137	3	390.865478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_STLAQPTPVC(Carbamidomethyl (C))P_	ENST00000373109.6_1_10:73822018-73822120:-|nuORF	29.550750289552195	0.6798279264880025	2				NaN	NaN	0	NaN	5620	3209	8826
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8832	25.737	NaN	5885	30	0	937.06	0.106	+			26689	LVHLGYLK	8	73	471.79276205985923	941.5709711865185	2	471.79290771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LVHLGYLK_	ENST00000383314.6_1_18:13762966-13763026:+|nuORF	44.53106598305862	0.628196326904373	2				NaN	NaN	0	NaN	5621	3209	8826
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8833	25.739	NaN	4582	30	0	792.41	0.035				-1	 	0	73	491.78146299358053	981.5483730539611	2	491.7819519042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5622	3209	8826
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8846	25.766	NaN	18520	30	0	2994.2	0.214				-1	 	0	78	485.2402004696574	968.4658480061148	2	485.240478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5632	3212	8845
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8847	25.77	NaN	6433.5	30	0	992.67	0.106				-1	 	0	60	476.7580326865393	951.5015124398786	2	476.7583312988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5633	3212	8845
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8848	25.772	NaN	3619.1	30	0	745.7	0.106				-1	 	0	63	461.2655440646736	920.5165351961472	2	461.2475280761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5634	3212	8845
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8849	25.773	NaN	19132	30	0	5158.2	0.106	+			51262	YRENKKLK	8	81	360.21688076196443	1077.6288128860933	3	360.2169494628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YRENKKLK_	ENSG00000108021|ENST00000695737|TASOR2;ENST00000487196.1_1_10:5800911-5803598:+|nuORF;nc|ENSG00000108021|Q5VWN6-2|TASOR2	64.20726635412375	0.4601301477144759	2				NaN	NaN	0	NaN	5635	3212	8845
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8850	25.775	NaN	8601	30	0	1919.5	0.106	+			42689	TCTAAHPEL	9	68	471.72057505556836	941.4265971779367	2	471.72064208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TCTAAHPEL_	nc|ENSG00000211890|P01877-1|IGHA2;nc|ENSG00000211890|P01877|IGHA2	68.78682469695295	0.14603441672067394	2				NaN	NaN	0	NaN	5636	3212	8845
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8851	25.777	NaN	7922	30	0	1061.1	0.106			+	37908	SPCLGLLSLF	10	82	525.2907880448394	NaN	0	525.2902221679688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SPCLGLLSLF_	REV__ENSG00000172771|ENST00000505956|EFCAB12	47.657333605630114	0.3204131577145918	2				NaN	NaN	0	NaN	5637	3212	8845
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8852	25.779	NaN	3134.6	30	0	446.34	0.033	+			18199	IMPACLAV	8	53	417.2163220054591	832.4180910777183	2	417.1944885253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_IM(Oxidation (M))PACLAV_	ENST00000482953.5_1_21:42762201-42762450:+|nuORF	43.626045697637714	0.6338121648150432	2				NaN	NaN	0	NaN	5638	3212	8845
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8865	25.897	NaN	50664	30	0	5246.5	0.201	+			47785	VSIEAGSAVGK	11	90	509.28185703086154	1016.5491611285231	2	509.28240966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSIEAGSAVGK_	ENSG00000176945|ENST00000447234|MUC20;ENST00000457750.1_1_3:195341833-195346985:+|nuORF;nc|ENSG00000176945|Q8N307-3|MUC20	180.09051358498644	8.12049839671008E-06	2				NaN	NaN	0	NaN	5648	3215	8864
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8866	25.9	NaN	37024	30	0	5808.8	0.106	+			40439	STVNKWTLK	9	92	538.8079887448007	1075.6014245564013	2	538.8089599609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STVNKWTLK_	ENSG00000114742|ENST00000302313|WDR48;nc|ENSG00000114742|Q8TAF3-3|WDR48;nc|ENSG00000114742|Q8TAF3-4|WDR48	232.72021466706244	5.03771422671752E-13	2				NaN	NaN	0	NaN	5649	3215	8864
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8867	25.902	NaN	14512	30	0	1260.7	0.106	+			43031	TEKVSKISL	9	76	502.80265039193	1003.59074785066	2	502.8028259277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TEKVSKISL_	ENSG00000054523|ENST00000676179|KIF1B;ENSG00000130294|ENST00000498729|KIF1A;KIF1A|p.N1306Kfs*14|1|0.46|ENSG00000130294|chr2:240725306-240725307|-/T|frameshift_variant;KIF1A|p.R782Afs*30|1|0.33|ENSG00000130294|chr2:240760738-240760738|G/-|frameshift_variant;KIF1B|p.N365Mfs*8|1|0.32|ENSG00000054523|chr1:10278037-10278037|C/-|frameshift_variant;nc|ENSG00000054523|O60333-2|KIF1B;nc|ENSG00000054523|O60333-3|KIF1B;nc|ENSG00000054523|O60333-4|KIF1B;nc|ENSG00000130294|Q12756-2|KIF1A;nc|ENSG00000130294|Q12756|KIF1A	82.83050618871818	0.08530945204495013	2				NaN	NaN	0	NaN	5650	3215	8864
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8868	25.904	NaN	24748	30	0	2263.5	0.106	+			19929	KEFEGKTLV	9	95	525.7945575303199	1049.5745621274398	2	525.795166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEFEGKTLV_	ENSG00000080824|ENST00000216281|HSP90AA1;ENST00000378770.1_1_4:190394307-190396341:+|nuORF;ENST00000530115.1_1_11:27910903-27911533:-|nuORF;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000205100|Q58FG1|HSP90AA4P	106.88024417677582	0.032181361622142884	2				NaN	NaN	0	NaN	5651	3215	8864
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8869	25.906	NaN	26954	30	0	5954.9	0.106	+			9502	EKTVAKVQV	9	63	334.5373500959334	1000.5902208880002	3	334.53765869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EKTVAKVQV_	ENSG00000119943|ENST00000370575|PYROXD2;ENST00000483923.5_1_10:100150731-100167745:-|nuORF;PYROXD2|p.P449Lfs*5|1|0.23|ENSG00000119943|chr10:98388455-98388455|G/-|frameshift_variant	47.657333605630114	0.33044192980041115	2				NaN	NaN	0	NaN	5652	3215	8864
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8870	25.907	NaN	10341	30	0	2662.6	0.106				-1	 	0	60	416.2497825758518	830.4850122185036	2	416.2502136230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5653	3215	8864
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8871	25.909	NaN	18933	30	0	2330	0.033			+	-1	NVGCDMAL	8	88	440.18777281160664	878.3609926900133	2	440.1883239746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_NVGC(Carbamidomethyl (C))DMAL_	REV__ENSG00000165140|ENST00000375326|FBP1;REV__FBP1|p.G294Efs*11|1|0.11|ENSG00000165140|chr9:94603517-94603517|C/-|frameshift_variant	44.116797842482775	0.6307669463330267	2				NaN	NaN	0	NaN	5654	3215	8864
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8886	25.939	NaN	127250	30	0	36204	0.214				-1	 	0	85	461.2655440646736	920.5165351961472	2	461.2659606933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5666	3218	8885
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8887	25.943	NaN	7606.5	30	0	1792	0.106				-1	 	0	68	455.77094681987086	909.5273407065417	2	455.7712097167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5667	3218	8885
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8888	25.945	NaN	5325.9	30	0	468.63	0.106	+			46362	VEKSVNEVM	9	70	517.7623912818005	1033.510229630401	2	517.7631225585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VEKSVNEVM_	ENSG00000120694|ENST00000320027|HSPH1;nc|ENSG00000120694|Q92598-2|HSPH1;nc|ENSG00000120694|Q92598-3|HSPH1;nc|ENSG00000120694|Q92598-4|HSPH1	58.2462437865262	0.22823408064396822	2				NaN	NaN	0	NaN	5668	3218	8885
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8889	25.946	NaN	4449.1	30	0	335.34	0.106	+			1350	AEVDKVARL	9	69	500.79259735347955	999.5706417737591	2	500.79290771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEVDKVARL_	ENSG00000013523|ENST00000251089|ANGEL1	95.81516180277367	0.04847050768394289	2				NaN	NaN	0	NaN	5669	3218	8885
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8890	25.948	NaN	3359.4	30	0	1099	0.106				-1	ASRVFCGRI	9	39	355.8586273388962	1064.5540526168886	3	355.8588562011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_ASRVFC(Carbamidomethyl (C))GRI_	ENSG00000105700|ENST00000222307|KXD1	31.529811441608018	0.5085848003137583	2				NaN	NaN	0	NaN	5670	3218	8885
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8891	25.95	NaN	14300	30	0	2247.5	0.038				-1	KFLMANGLMGL	11	68	404.21519130044476	1209.6237445015342	3	404.215576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_KFLM(Oxidation (M))ANGLMGL_	nc|ENSG00000057608|P50395-2|GDI2	25.125986553469783	0.7262400895305658	2				NaN	NaN	0	NaN	5671	3218	8885
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8892	25.951	NaN	4321.9	30	0	844.53	0.137	+			15796	GVVKIGPN	8	52	392.23945698953753	782.4643610458751	2	392.2397766113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GVVKIGPN_	ENST00000261318.4_1_12:117152555-117152831:-|nuORF	42.47446043378293	0.6409579893742323	2				NaN	NaN	0	NaN	5672	3218	8885
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8905	25.979	NaN	9748.8	30	0	695.49	0.214	+			9315	EIDNIKNQV	9	85	536.7845312023031	1071.5545094714062	2	536.7857666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EIDNIKNQV_	ENST00000551130.1_1_12:52635330-52637101:+|nuORF	112.41091882917199	0.026537921851008135	2				NaN	NaN	0	NaN	5682	3221	8904
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8906	25.983	NaN	10366	30	0	2134.2	0.106	+			33388	RIAESHLQSI	10	70	577.319281413614	1152.624009894028	2	577.3203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RIAESHLQSI_	ENSG00000131771|ENST00000254079|PPP1R1B;ENST00000492037.5_1_17:37785754-37792115:+|nuORF;ENST00000580029.1_1_17:37790107-37792115:+|nuORF;nc|ENSG00000131771|Q9UD71-2|PPP1R1B;PPP1R1B|p.N97Rfs*45|1|0.46|ENSG00000131771|chr17:39633928-39633931|TGAA/-|frameshift_variant	72.09557110113691	0.26019946548822415	2				NaN	NaN	0	NaN	5683	3221	8904
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8907	25.985	NaN	11616	30	0	1533.1	0.106	+			1761	AIANFTNQK	9	73	503.7691115369209	1005.5236701406418	2	503.76959228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AIANFTNQK_	ENSG00000138756|ENST00000502613|BMP2K;nc|ENSG00000138756|Q9NSY1-2|BMP2K;nc|ENSG00000138756|Q9NSY1-3|BMP2K	148.98678547993487	0.0071052929883181565	2				NaN	NaN	0	NaN	5684	3221	8904
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8908	25.987	NaN	27019	30	0	2054.8	0.106				-1	 	0	87	488.3022884703221	974.5900240074442	2	488.30255126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5685	3221	8904
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8909	25.988	NaN	4724.6	30	0	441.92	0.106			+	24510	LGKEGVQN	8	60	422.7291751006533	843.4437972681067	2	422.729736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LGKEGVQN_	REV__ENSG00000073737|ENST00000674881|DHRS9;REV__nc|ENSG00000073737|Q9BPW9-3|DHRS9;REV__nc|ENSG00000073737|Q9BPW9-4|DHRS9	66.42927471994793	0.4381325844043345	2				NaN	NaN	0	NaN	5686	3221	8904
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8910	25.99	NaN	10506	30	0	3414.6	0.033	+			1230	AERAINTL	8	73	444.25023973740656	886.4859265416131	2	444.25079345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AERAINTL_	ENSG00000066044|ENST00000407627|ELAVL1;nc|ENSG00000066044|Q15717-2|ELAVL1	67.49366992349736	0.4277823096851425	2				NaN	NaN	0	NaN	5687	3221	8904
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8911	25.991	NaN	6974	30	0	2004.7	0.14			+	8816	EELFNPLQ	8	70	495.25082529403306	988.4870976548661	2	495.2505798339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EELFNPLQ_	REV__ENSG00000099994|ENST00000358321|SUSD2;REV__ENST00000463101.1_1_22:24579934-24582448:+|nuORF;REV__SUSD2|p.P444Qfs*13|1|0.16|ENSG00000099994|chr22:24185917-24185917|C/-|frameshift_variant	68.78682469695295	0.41700713582915416	2				NaN	NaN	0	NaN	5688	3221	8904
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8926	26.024	NaN	41081	30	0	5382.9	0.214	+			7334	DAVRTKMVY	9	83	541.7860052870749	1081.5574576409497	2	541.7871704101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DAVRTKMVY_	ENSG00000149100|ENST00000531120|EIF3M;nc|ENSG00000149100|Q7L2H7-2|EIF3M	127.46168284122857	0.016682644177004526	2				NaN	NaN	0	NaN	5700	3224	8925
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8927	26.028	NaN	42775	30	0	28080	0.106				-1	 	0	62	417.234280482248	1248.681012046944	3	417.2347412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5701	3224	8925
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8928	26.03	NaN	11480	30	0	5246.2	0.106	+			1202	AEQELLLTL	9	74	515.2959160593138	1028.5772791854274	2	515.2962036132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEQELLLTL_	ENSG00000249437|ENST00000517649|NAIP;ENST00000315147.8_1_5:70265933-70281744:-|nuORF;ENST00000511830.2_1_5:69390488-69422514:-|nuORF;ENST00000512908.2_1_5:70398727-70422449:-|nuORF;nc|ENSG00000249437|Q13075-2|NAIP	54.776311868738084	0.25715957988447635	2				NaN	NaN	0	NaN	5702	3224	8925
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8929	26.031	NaN	26946	30	0	7340.5	0.106				-1	 	0	78	420.89031315072725	1259.6491100523817	3	420.8907165527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5703	3224	8925
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8930	26.033	NaN	5603.3	30	0	710.03	0.106	+			5651	AVDGNTVELK	10	75	523.2792348118735	1044.543916690547	2	523.2801513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVDGNTVELK_	ENSG00000177733|ENST00000314940|HNRNPA0	52.167168403610894	0.437078873413402	2				NaN	NaN	0	NaN	5704	3224	8925
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8931	26.035	NaN	9651.9	30	0	3483.5	0.036	+			32522	QVQVVLNQK	9	74	528.3131905553709	1054.6118281775416	2	528.314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QVQVVLNQK_	ENSG00000140688|ENST00000327237|RUSF1;ENST00000568491.1_1_16:31502158-31504599:-|nuORF;nc|ENSG00000140688|Q96GQ5-2|RUSF1	116.90359126533652	0.02307425081617795	2				NaN	NaN	0	NaN	5705	3224	8925
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8932	26.036	NaN	6853.7	30	0	1696.7	0.14	+			27991	MVTEIRLK	8	68	495.2936368408249	988.5727207484498	2	495.2940979003906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MVTEIRLK_	ENSG00000189091|ENST00000302516|SF3B3	64.20726635412375	0.4601301477144759	2				NaN	NaN	0	NaN	5706	3224	8925
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8944	26.063	NaN	61329	30	0	16509	0.214			+	40267	STSPTNYVK	9	84	498.7523939116867	995.4902348901734	2	499.2509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STSPTNYVK_	REV__ENSG00000139154|ENST00000266508|AEBP2;REV__nc|ENSG00000139154|Q6ZN18-3|AEBP2;REV__nc|ENSG00000139154|Q6ZN18|AEBP2	58.78195531508484	0.22376836668196862	2				NaN	NaN	0	NaN	5715	3227	8943
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8945	26.067	NaN	16127	30	0	2500.5	0.106	+			10254	ETLDSVLKK	9	80	516.8006548813952	1031.5867568295903	2	516.8010864257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ETLDSVLKK_	ENSG00000108830|ENST00000587250|RND2;ENSG00000115963|ENST00000263895|RND3	49.44154591367651	0.3095138337212152	2				NaN	NaN	0	NaN	5716	3227	8943
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8946	26.069	NaN	10852	30	0	2260.5	0.106	+			22478	KTNAIISLK	9	72	494.31297404368394	986.6113951541679	2	494.3133850097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KTNAIISLK_	ENST00000539028.1_1_12:10010098-10010200:-|nuORF	114.85826248499774	0.024312442104607014	2				NaN	NaN	0	NaN	5717	3227	8943
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8947	26.071	NaN	13298	30	0	1375	0.106	+			17630	IEKAVQSL	8	75	444.26328529592723	NaN	0	444.2632141113281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IEKAVQSL_	ENSG00000162704|ENST00000359856|ARPC5;ENST00000462965.1_1_1:183596669-183602348:-|nuORF;ENST00000602490.1_1_1:183599580-183599799:-|nuORF;nc|ENSG00000162704|O15511-2|ARPC5	166.67852932204877	0.12560497610327276	2				NaN	NaN	0	NaN	5718	3227	8943
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8948	26.072	NaN	6307.6	30	0	1035.4	0.106	+			38191	SQFEGSALGK	10	68	512.2582470007555	1022.5019410683111	2	512.2586059570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SQFEGSALGK_	ENSG00000118137|ENST00000236850|APOA1	68.62578634547417	0.2885473079336931	2				NaN	NaN	0	NaN	5719	3227	8943
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8949	26.074	NaN	7704.8	30	0	1876.3	0.035	+			49088	VVLDQTGVSK	10	70	523.2974213481077	1044.5802897630153	2	523.2985229492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VVLDQTGVSK_	ENSG00000180098|ENST00000373830|TRNAU1AP;ENST00000464093.1_1_1:28887839-28891347:+|nuORF;ENST00000484775.1_1_1:28887181-28904036:+|nuORF;ENST00000491577.5_1_1:28887839-28904145:+|nuORF;nc|ENSG00000180098|Q9NX07-2|TRNAU1AP;TRNAU1AP|p.Q222Sfs*29|1|0.24|ENSG00000180098|chr1:28571305-28571305|C/-|frameshift_variant	102.0615471778698	0.07157459376830236	2				NaN	NaN	0	NaN	5720	3227	8943
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8950	26.075	NaN	8125	30	0	621.17	0.141	+			50688	YEENAKAEL	9	76	533.7554394203995	1065.496325907599	2	533.7564086914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YEENAKAEL_	BBS2|p.F575Lfs*8|1|0.19|ENSG00000125124|chr16:56497815-56497815|A/-|frameshift_variant;ENSG00000125124|ENST00000245157|BBS2	106.68306549817024	0.032382560583716295	2				NaN	NaN	0	NaN	5721	3227	8943
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8964	26.106	NaN	131170	30	0	49668	0.169	+			14967	GTMTGMLYK	9	88	509.2399662279135	1016.465379522627	2	509.2407531738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_GTM(Oxidation (M))TGMLYK_	ENSG00000178440|ENST00000651763|TIMM23B-AGAP6;ENSG00000204152|ENST00000651259|TIMM23B;ENSG00000265354|ENST00000580018|TIMM23;nc|ENSG00000204152|Q5SRD1-2|TIMM23B	157.32903759742106	0.0051608477690748295	2				NaN	NaN	0	NaN	5732	3230	8963
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8965	26.109	NaN	67502	30	0	28201	0.106				-1	TLMQKVEVF	9	87	370.866510147206	1109.577701041818	3	370.86688232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_TLM(Oxidation (M))QKVEVF_	ENSG00000198793|ENST00000361445|MTOR	63.53385203322761	0.18415635464017938	2				NaN	NaN	0	NaN	5733	3230	8963
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8966	26.111	NaN	48632	30	0	25069	0.106				-1	 	0	94	501.8000836440828	1001.5856143549656	2	501.80035400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5734	3230	8963
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8967	26.113	NaN	61306	30	0	17246	0.106				-1	 	0	74	413.914548332046	1238.721815596338	3	413.91497802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5735	3230	8963
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8968	26.115	NaN	8765.8	30	0	2158.4	0.106	+			43001	TEKKVWNVL	9	66	372.8848848191218	1115.6328250575655	3	372.8851318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TEKKVWNVL_	ENST00000381222.8_2_X:2405587-2405806:-|nuORF	32.81241826257853	0.4965981579233955	2				NaN	NaN	0	NaN	5736	3230	8963
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8969	26.117	NaN	9892.4	30	0	2180.6	0.106				-1	LGGEWTTPA	9	73	487.2365461053031	972.4585392774062	2	487.23626708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LGGEWTTPA_	ENST00000334513.5_1_1:145587804-145588444:-|nuORF	47.91560031466742	0.327412564698279	2				NaN	NaN	0	NaN	5737	3230	8963
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8970	26.118	NaN	7467.8	30	0	640.25	0.037	+			28765	NPEEHATYY	9	77	562.2376152913415	1122.460677649483	2	562.2385864257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NPEEHATYY_	ENSG00000083097|ENST00000349129|DOP1A	98.62937762414208	0.04060045538121712	2				NaN	NaN	0	NaN	5738	3230	8963
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8984	26.148	NaN	225950	30	0	127520	0.135	+			30620	QASDVSVKY	9	91	498.7523939116867	995.4902348901734	2	498.7534484863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QASDVSVKY_	ENSG00000047410|ENST00000367478|TPR;nc|ENSG00000047410|P12270-2|TPR;TPR|p.E1141Dfs*29|1|0.08|ENSG00000047410|chr1:186344085-186344086|-/CAGGTAAA|frameshift_variant;TPR|p.G216Rfs*3|1|0.34|ENSG00000047410|chr1:186362887-186362888|-/T|frameshift_variant;TPR|p.P2083Qfs*3|1|0.31|ENSG00000047410|chr1:186323735-186323735|G/-|frameshift_variant;TPR|p.T2133Lfs*63|1|0.03|ENSG00000047410|chr1:186322382-186322383|-/GTACTAATAAG|frameshift_variant;TPR|p.V1142Efs*26|1|0.08|ENSG00000047410|chr1:186344083-186344084|-/TT|frameshift_variant	106.68306549817024	0.032382560583716295	2				NaN	NaN	0	NaN	5749	3233	8983
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8985	26.151	NaN	39940	30	0	12065	0.106				-1	 	0	77	502.78418359613033	1003.5538142590607	2	502.7845458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5750	3233	8983
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8986	26.152	NaN	65456	30	0	8355.5	0.106				-1	 	0	92	520.2556920790599	1038.4968312249198	2	520.256591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5751	3233	8983
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8987	26.154	NaN	24190	30	0	2533.2	0.106				-1	 	0	66	416.2133636200783	830.4121743069567	2	416.2138977050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5752	3233	8983
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8988	26.156	NaN	10739	30	0	1740.5	0.106	+			33758	RPSRRVASR	9	80	542.8264458370351	1083.63833874087	2	542.8278198242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RPSRRVASR_	ENST00000495756.5_1_3:112255248-112280627:-|nuORF	54.776311868738084	0.25715957988447635	2				NaN	NaN	0	NaN	5753	3233	8983
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8989	26.158	NaN	10933	30	0	2209.4	0.106	+			17032	HPVQHISF	8	67	482.7531136027411	963.4916742722822	2	482.7535095214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HPVQHISF_	ENSG00000174989|ENST00000652555|FBXW8;nc|ENSG00000174989|Q8N3Y1-2|FBXW8	108.08749611321984	0.24621691167378246	2				NaN	NaN	0	NaN	5754	3233	8983
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8990	26.16	NaN	19159	30	0	4981.1	0.034				-1	 	0	75	472.27619056484843	942.5378281964969	2	472.2763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5755	3233	8983
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9002	26.185	NaN	14031	30	0	2045.9	0.214	+			8889	EETGAKISV	9	81	467.24758025822064	932.4806075832413	2	467.24761962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EETGAKISV_	ENSG00000121774|ENST00000327300|KHDRBS1;ENST00000307714.12_1_1:32479575-32503673:+|nuORF;KHDRBS1|p.A312Gfs*56|1|0.28|ENSG00000121774|chr1:32037857-32037858|-/G|frameshift_variant;KHDRBS1|p.P237Hfs*19|1|0.32|ENSG00000121774|chr1:32033269-32033269|C/-|frameshift_variant;KHDRBS1|p.P336Hfs*4|1|0.41|ENSG00000121774|chr1:32037932-32037932|C/-|frameshift_variant;nc|ENSG00000121774|Q07666-2|KHDRBS1	112.41091882917199	0.026537921851008135	2				NaN	NaN	0	NaN	5764	3236	9001
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9003	26.189	NaN	5324.3	30	0	678.04	0.106	+			40269	STSQLYTVK	9	66	513.7760356065018	1025.5375182798034	2	513.776611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STSQLYTVK_	ENSG00000143815|ENST00000272163|LBR	47.95952297671804	0.32689736945648856	2				NaN	NaN	0	NaN	5765	3236	9001
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9004	26.191	NaN	5115.3	30	0	359.88	0.106				-1	VSLPMARRV	9	71	522.8030359156338	1043.5915188980675	2	522.805908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_VSLPM(Oxidation (M))ARRV_	ENST00000310430.10_1_8:9637662-9637818:+|nuORF	42.396135135203025	0.392153681582562	2				NaN	NaN	0	NaN	5766	3236	9001
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9005	26.193	NaN	4759.4	30	0	672.11	0.106	+			17818	IEYAKPTRL	9	61	545.8156182605039	1089.6166835878078	2	545.81640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IEYAKPTRL_	ENSG00000104824|ENST00000221419|HNRNPL;HNRNPL|p.P337Hfs*58|9|0.35|ENSG00000104824|chr19:38840319-38840319|G/-|frameshift_variant;HNRNPL|p.P338Tfs*56|1|0.23|ENSG00000104824|chr19:38840318-38840319|-/G|frameshift_variant;nc|ENSG00000104824|P14866-2|HNRNPL	60.1669710687717	0.2122228167747824	2				NaN	NaN	0	NaN	5767	3236	9001
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9006	26.194	NaN	3872.3	30	0	830.25	0.106	+			7841	DQMVWFRE	8	61	555.755526516268	1109.496500099336	2	555.7567138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DQMVWFRE_	ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;TRRAP|p.K3443Sfs*19|1|0.28|ENSG00000196367|chr7:99004246-99004246|A/-|frameshift_variant	47.657333605630114	0.6087971902037268	2				NaN	NaN	0	NaN	5768	3236	9001
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9007	26.196	NaN	4349.9	30	0	353.65	0.106	+			31549	QLLRLLNTT	9	71	536.3288328898797	1070.6431128465592	2	536.329833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QLLRLLNTT_	DST|p.K5076Nfs*24|1|0.31|ENSG00000151914|chr6:56472218-56472218|T/-|frameshift_variant;DST|p.T4428Nfs*23|1|0.12|ENSG00000151914|chr6:56497896-56497897|-/T|frameshift_variant;ENSG00000151914|ENST00000680361|DST;nc|ENSG00000151914|Q03001|DST	49.44154591367651	0.3095138337212152	2				NaN	NaN	0	NaN	5769	3236	9001
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9008	26.198	NaN	26482	30	0	2394.4	0.035	+			45752	VAEENTRVL	9	75	515.7803388062748	NaN	0	516.2683715820312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VAEENTRVL_	ENSG00000156256|ENST00000399976|USP16;ENST00000485067.1_1_21:30426080-30426505:+|nuORF;nc|ENSG00000156256|Q9Y5T5-2|USP16;nc|ENSG00000156256|Q9Y5T5-3|USP16;nc|ENSG00000156256|Q9Y5T5-4|USP16	83.6470233535746	0.058886874190800687	2				NaN	NaN	0	NaN	5770	3236	9001
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9022	26.228	NaN	54089	30	0	6430.7	0.214	+			45753	VAEENTRVL	9	84	515.7803388062748	NaN	0	515.7799682617188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VAEENTRVL_	ENSG00000156256|ENST00000399976|USP16;ENST00000485067.1_1_21:30426080-30426505:+|nuORF;nc|ENSG00000156256|Q9Y5T5-2|USP16;nc|ENSG00000156256|Q9Y5T5-3|USP16;nc|ENSG00000156256|Q9Y5T5-4|USP16	101.45984612302182	0.018494728971010316	2				NaN	NaN	0	NaN	5781	3239	9021
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9023	26.232	NaN	31483	30	0	6533.1	0.106				-1	 	0	69	485.2383985012675	968.462244069335	2	485.23876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5782	3239	9021
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9024	26.234	NaN	13096	30	0	2952.5	0.106				-1	 	0	68	456.76602496275336	911.5174969923067	2	456.7664794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5783	3239	9021
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9025	26.235	NaN	7632.2	30	0	3976.7	0.106	+			47008	VKVLSEKAIL	10	69	550.3574107978898	1098.7002686625794	2	550.3582763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VKVLSEKAIL_	ENSG00000163512|ENST00000479665|AZI2	21.9598887501803	0.7004979571547932	2				NaN	NaN	0	NaN	5784	3239	9021
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9026	26.237	NaN	6269.2	30	0	2419.6	0.106	+			43495	TGPVMPVR	8	60	428.738615926798	855.462678920396	2	428.7388916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TGPVMPVR_	ENSG00000167526|ENST00000311528|RPL13;ENST00000399461.8_1_16:89627605-89629447:+|nuORF;ENST00000484610.5_1_16:89627907-89629447:+|nuORF;ENST00000570149.1_1_16:89628679-89629447:+|nuORF;nc|ENSG00000167526|P26373-2|RPL13	64.20726635412375	0.4601301477144759	2				NaN	NaN	0	NaN	5785	3239	9021
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9027	26.239	NaN	2509	30	0	255.62	0.034	+			48149	VSYGEGKAL	9	62	462.24483651941864	922.4751201056373	2	462.24493408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VSYGEGKAL_	ENSG00000181467|ENST00000323534|RAP2B	49.536043120802724	0.308405419312776	2				NaN	NaN	0	NaN	5786	3239	9021
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9028	26.24	NaN	5415.9	30	0	1905	0.14	+			29264	NYDNLLKV	8	69	489.76487577866203	977.5151986241241	2	490.26470947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NYDNLLKV_	tr|U7SRZ8|U7SRZ8_FUSNUDNA3'-5'helicaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01488PE=3SV=1	45.9519527083369	0.6193794311207887	2				NaN	NaN	0	NaN	5787	3239	9021
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9041	26.269	NaN	5949.8	30	0	892.14	0.214	+			795	AEFLDKHVT	9	64	530.2763286264577	1058.5381043197153	2	530.2775268554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEFLDKHVT_	ENSG00000079459|ENST00000220584|FDFT1;nc|ENSG00000079459|P37268-2|FDFT1;nc|ENSG00000079459|P37268-3|FDFT1;nc|ENSG00000079459|P37268-4|FDFT1	90.60085204095205	0.06317133949006545	2				NaN	NaN	0	NaN	5797	3242	9040
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9042	26.273	NaN	5348.6	30	0	2437.2	0.106	+			14234	GSSSDTYLFKK	11	48	411.54299496500823	1231.6071554952248	3	411.5433654785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSSSDTYLFKK_	ENSG00000184898|ENST00000331426|RBM43	19.262678746197807	0.7802940895261122	2				NaN	NaN	0	NaN	5798	3242	9040
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9043	26.274	NaN	8922.9	30	0	1768.7	0.106			+	27409	MKTIKCIY	8	51	358.18898748750007	1071.5451330627002	3	358.1892395019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))KTIKC(Carbamidomethyl (C))IY_	REV__ENSG00000180998|ENST00000321662|GPR137C	55.50420428727701	0.5462892107279674	2				NaN	NaN	0	NaN	5799	3242	9040
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9044	26.276	NaN	7876.5	30	0	1079.2	0.106	+			18772	ITQEMQTLK	9	77	546.2911266453898	1090.5677003575795	2	546.292236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ITQEMQTLK_	ENSG00000104133|ENST00000261866|SPG11;nc|ENSG00000104133|Q96JI7-2|SPG11;nc|ENSG00000104133|Q96JI7-3|SPG11	131.115847015877	0.014647977962315902	2				NaN	NaN	0	NaN	5800	3242	9040
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9045	26.278	NaN	2793.8	30	0	203.08	0.106			+	15569	GVGGEFCGGP	10	59	440.18777281160664	878.3609926900133	2	440.1883239746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GVGGEFCGGP_	REV__KCNC2|p.A82V|1|0.26|ENSG00000166006|chr12:75207739-75207739|G/A|missense_variant	30.503639358989545	0.6307262373768582	2				NaN	NaN	0	NaN	5801	3242	9040
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9046	26.28	NaN	6459.4	30	0	1456.1	0.038				-1	YRQLNLDMF	9	58	405.8659347948875	1214.5759749848626	3	405.8667907714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_YRQLNLDM(Oxidation (M))F_	ENSG00000177182|ENST00000325897|CLVS1;ENST00000521189.1_1_8:62212560-62289213:+|nuORF;nc|ENSG00000177182|Q8IUQ0-2|CLVS1	29.14955571784316	0.5308295550522326	2				NaN	NaN	0	NaN	5802	3242	9040
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9047	26.281	NaN	2366.3	30	0	249.34	0.14	+			50300	WSLGNYLAV	9	65	511.76701567930456	1021.5194784254091	2	511.76708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_WSLGNYLAV_	ENSG00000140323|ENST00000267889|DISP2	27.882242232435846	0.5426732730940306	2				NaN	NaN	0	NaN	5803	3242	9040
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9058	26.308	NaN	108020	30	0	17653	0.152	+			48500	VTNDGATILK	10	88	516.2889311910861	1030.5633094489722	2	516.2901611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTNDGATILK_	ENSG00000166226|ENST00000299300|CCT2;ENST00000546859.5_1_12:69979244-69981900:+|nuORF;ENST00000550455.5_1_12:69979244-69981425:+|nuORF;ENST00000550638.5_1_12:69979244-69982049:+|nuORF;ENST00000551620.5_1_12:69979244-69983508:+|nuORF;nc|ENSG00000166226|P78371-2|CCT2	188.9123650225555	0.0003434289860817577	2				NaN	NaN	0	NaN	5811	3245	9057
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9059	26.311	NaN	19208	30	0	1885.4	0.106			+	17857	IFSNNQSTV	9	85	505.2508387030312	1008.4871244728624	2	505.25115966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IFSNNQSTV_	REV__AFF2|p.K542N|1|0.32|ENSG00000155966|chrX:148955671-148955671|G/T|missense_variant	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	5812	3245	9057
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9060	26.313	NaN	58734	30	0	11965	0.106			+	46453	VESLLDVDTF	10	105	379.8606654167145	1136.5601668503434	3	379.8610534667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VESLLDVDTF_	REV__ENSG00000180921|ENST00000388913|FAM83H;REV__FAM83H|p.G365Afs*180|1|0.14|ENSG00000180921|chr8:143728367-143728367|C/-|frameshift_variant	37.15910966729921	0.575322462179216	2				NaN	NaN	0	NaN	5813	3245	9057
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9061	26.315	NaN	28208	30	0	3465.4	0.106	+			45581	TYNQKHSLF	9	89	569.2868155739525	1136.5590782147049	2	569.2883911132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TYNQKHSLF_	ENSG00000165175|ENST00000614558|MID1IP1	180.86945649972546	0.001208757763874378	2				NaN	NaN	0	NaN	5814	3245	9057
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9062	26.316	NaN	26004	30	0	13379	0.106				-1	MTLSPSYRMDD	11	74	444.5243830869632	1330.5513198610897	3	444.524658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_MTLSPSYRM(Oxidation (M))DD_	ENSG00000165526|ENST00000298317|RPUSD4;ENST00000530903.1_1_11:126073315-126075741:-|nuORF	27.64392233501311	0.6998289966465058	2				NaN	NaN	0	NaN	5815	3245	9057
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9063	26.318	NaN	15427	30	0	3713.6	0.106			+	46171	VDVLLNGA	8	77	400.72885146358243	799.4431499939649	2	400.72930908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VDVLLNGA_	REV__AP2A1|p.Q851Rfs*5|1|0.43|ENSG00000196961|chr19:49805672-49805672|C/-|frameshift_variant;REV__ENSG00000196961|ENST00000354293|AP2A1;REV__ENST00000597774.5_1_19:50303271-50309027:+|nuORF;REV__ENST00000600466.1_1_19:50304984-50305399:+|nuORF;REV__nc|ENSG00000196961|O95782|AP2A1	50.0245360154114	0.5941082100236891	2				NaN	NaN	0	NaN	5816	3245	9057
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9064	26.32	NaN	7477.7	30	0	827.14	0.033	+			45828	VAKAVTQAL	9	67	450.77850588431346	899.5424588354269	2	450.7789001464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VAKAVTQAL_	ENSG00000137076|ENST00000314888|TLN1;nc|ENSG00000137076|Q9Y490-2|TLN1;TLN1|p.P1628Rfs*20|1|0.44|ENSG00000137076|chr9:35707144-35707144|G/-|frameshift_variant	47.95952297671804	0.32689736945648856	2				NaN	NaN	0	NaN	5817	3245	9057
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9078	26.35	NaN	46786	30	0	14567	0.214				-1	 	0	77	401.2446211892694	800.4746894453389	2	401.2450866699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5828	3248	9077
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9079	26.353	NaN	21130	30	0	2858.5	0.106	+			35578	SAYGSVKAY	9	77	473.23735634621374	944.4601597592275	2	473.2372741699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAYGSVKAY_	ENSG00000182718|ENST00000451270|ANXA2;ENST00000557937.5_1_15:60655071-60678274:-|nuORF;nc|ENSG00000182718|P07355-2|ANXA2;nc|ENSG00000231991|A6NMY6|ANXA2P2;NPTN-ANXA2|1|fusion	112.41091882917199	0.026537921851008135	2				NaN	NaN	0	NaN	5829	3248	9077
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9080	26.355	NaN	9927.9	30	0	2341.1	0.106			+	-1	DYLCFWHCF	9	78	449.84662870451825	1346.5180567137547	3	449.8473205566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_DYLC(Carbamidomethyl (C))FWHC(Carbamidomethyl (C))F_	REV__L1PA8_dup4178|chr8:94121319-94127043:-|4.057818296907117|0.2856926403965029|3.83|481.0|268|2|anti-sense	20.94693142431847	0.6074874384046576	2				NaN	NaN	0	NaN	5830	3248	9077
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9081	26.357	NaN	12738	30	0	2290.6	0.106				-1	 	0	79	579.7743039633399	1157.5340549934797	2	579.775634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5831	3248	9077
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9082	26.359	NaN	4417.2	30	0	406.22	0.106			+	31685	QNKTINFKT	9	75	547.30302414402	1092.59149535484	2	547.3041381835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QNKTINFKT_	REV__tr|U7T1R0|U7T1R0_FUSNUUDP-N-acetylmuramoylalanine--D-glutamateligaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=murDPE=3SV=1	68.84614121027924	0.14577793175421136	2				NaN	NaN	0	NaN	5832	3248	9077
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9083	26.361	NaN	18371	30	0	3082.8	0.036				-1	 	0	81	525.803592678116	1049.592632423032	2	525.8043823242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5833	3248	9077
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9084	26.361	NaN	1394.4	30	0	106.77	0.143	+			13805	GQMTVKDLTAK	11	57	596.3234188882194	1190.6322848432387	2	596.3236694335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GQMTVKDLTAK_	CFTR|p.L1258Ffs*7|1|0.26|ENSG00000001626|chr7:117642487-117642488|-/T|frameshift_variant;CFTR|p.S1297Lfs*31|1|0.28|ENSG00000001626|chr7:117652852-117652852|T/-|frameshift_variant;ENSG00000001626|ENST00000003084|CFTR;nc|ENSG00000001626|P13569-2|CFTR	88.1336951990783	0.1064147647397003	2				NaN	NaN	0	NaN	5834	3248	9077
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9096	26.389	NaN	17146	30	0	9550	0.214			+	-1	TVVNILDKKMS	11	72	421.903427186157	1262.688452158671	3	421.9040222167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_TVVNILDKKM(Oxidation (M))S_	REV__ZNF394|p.F346Lfs*56|1|0.31|ENSG00000160908|chr7:99494177-99494177|A/-|frameshift_variant	34.08650109265054	0.6322515996262609	2				NaN	NaN	0	NaN	5843	3251	9095
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9097	26.392	NaN	9884.3	30	0	1636.7	0.106	+			37331	SLEIEPRN	8	67	479.2530461855895	956.491539437979	2	479.25341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLEIEPRN_	ENSG00000100485|ENST00000216373|SOS2;ENSG00000115904|ENST00000402219|SOS1;nc|ENSG00000100485|Q07890-2|SOS2;SOS1|p.K1030Nfs*6|1|0.34|ENSG00000115904|chr2:38995379-38995379|T/-|frameshift_variant	68.78682469695295	0.41700713582915416	2				NaN	NaN	0	NaN	5844	3251	9095
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9098	26.394	NaN	5349.3	30	0	478.01	0.106	+			19908	KEFDGKSLVS	10	69	555.2950682225526	1108.575583511905	2	555.2958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEFDGKSLVS_	ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;ENST00000517330.1_1_5:77337712-77337985:-|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P;nc|ENSG00000205940|Q58FF8|HSP90AB2P	79.07001860377117	0.20321883041390024	2				NaN	NaN	0	NaN	5845	3251	9095
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9099	26.396	NaN	10387	30	0	1295.9	0.106	+			20470	KEVVHTVSL	9	78	506.294938780319	1010.575324627438	2	506.295166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEVVHTVSL_	ENSG00000183207|ENST00000595090|RUVBL2;ENST00000596247.5_1_19:49507512-49519096:+|nuORF;nc|ENSG00000183207|Q9Y230-2|RUVBL2	63.53385203322761	0.18415635464017938	2				NaN	NaN	0	NaN	5846	3251	9095
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9100	26.398	NaN	17202	30	0	4607.6	0.106			+	4714	ATLVSLRGNY	10	80	365.20453039583003	1092.59176178769	3	365.2049560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATLVSLRGNY_	REV__ANKRD26|p.K1234Nfs*19|2|0.18|ENSG00000107890|chr10:27033330-27033330|T/-|frameshift_variant;REV__ANKRD26|p.K1452Rfs*7|1|0.29|ENSG00000107890|chr10:27017653-27017653|T/-|frameshift_variant;REV__ANKRD26|p.N1518Ifs*14|1|0.04|ENSG00000107890|chr10:27014665-27014666|-/A|frameshift_variant;REV__ANKRD26|p.N1518Lfs*11|1|0.04|ENSG00000107890|chr10:27014666-27014667|-/AGAATCATAGGAAATAA|frameshift_variant;REV__ANKRD26|p.N1659Kfs*4|1|0.3|ENSG00000107890|chr10:27006939-27006940|-/T|frameshift_variant;REV__ANKRD26|p.Y1555Ifs*2|1|0.28|ENSG00000107890|chr10:27014555-27014556|-/T|frameshift_variant;REV__ENSG00000107890|ENST00000376087|ANKRD26;REV__nc|ENSG00000107890|Q9UPS8-2|ANKRD26	35.61828744233558	0.588957954432594	2				NaN	NaN	0	NaN	5847	3251	9095
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9101	26.4	NaN	15109	30	0	3086.3	0.039	+			44896	TTYKYEMINK	10	84	430.8842619857862	1289.6309565575586	3	430.8846435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TTYKYEMINK_	ENSG00000100129|ENST00000652021|EIF3L;ENST00000457262.1_1_10:43062145-43062928:+|nuORF;ENST00000495197.1_1_10:38368986-38369799:-|nuORF;nc|ENSG00000100129|Q9Y262-2|EIF3L	72.2432373244024	0.2589930451692646	2				NaN	NaN	0	NaN	5848	3251	9095
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9102	26.4	NaN	5666	30	0	830.03	0.138				-1	 	0	67	437.57292649761314	3055.959550217092	7	437.7165832519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5849	3251	9095
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9117	26.434	NaN	64384	30	0	21962	0.214	+			5235	ATVAEKTK	8	83	424.247300179089	846.480047424978	2	424.2476501464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATVAEKTK_	ENSG00000145335|ENST00000394991|SNCA;nc|ENSG00000145335|P37840-2|SNCA;SNCA|p.G51V|1|0.05|ENSG00000145335|chr4:89828154-89828154|C/A|missense_variant	134.81075121484326	0.23895231276701365	2				NaN	NaN	0	NaN	5861	3254	9116
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9118	26.437	NaN	33533	30	0	9649.3	0.106				-1	 	0	70	513.7491367508219	1025.4837205684437	2	513.749755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5862	3254	9116
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9119	26.439	NaN	18902	30	0	2877.8	0.106				-1	 	0	87	504.77665222964515	1007.5387515260903	2	504.777099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5863	3254	9116
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9120	26.441	NaN	13867	30	0	3499.5	0.106	+			782	AEFAERTVA	9	69	497.2529895395169	992.4914261458338	2	497.2534484863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEFAERTVA_	ENSG00000167460|ENST00000643579|TPM4;ENST00000368528.3_1_3:27674554-27675208:+|nuORF;ENST00000520239.1_1_8:70042334-70042577:+|nuORF;nc|ENSG00000167460|P67936-2|TPM4	85.86182877749512	0.07653218437724067	2				NaN	NaN	0	NaN	5864	3254	9116
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9121	26.443	NaN	27401	30	0	5479.6	0.106	+			6302	AVSTLGISK	9	86	438.2630092257419	874.5114655182838	2	438.2633056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVSTLGISK_	ENSG00000103160|ENST00000219439|HSDL1;nc|ENSG00000103160|Q3SXM5-2|HSDL1	83.6470233535746	0.08277643980271215	2				NaN	NaN	0	NaN	5865	3254	9116
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9122	26.445	NaN	13240	30	0	3783.5	0.106	+			23493	LAGDAAASLL	10	81	451.2514572505039	900.4883615678078	2	452.2604064941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LAGDAAASLL_	ENST00000252675.6_1_19:5866654-5867368:-|nuORF	35.61828744233558	0.588957954432594	2				NaN	NaN	0	NaN	5866	3254	9116
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9123	26.447	NaN	5777.6	30	0	1622.1	0.035	+			14290	GSVYITLKK	9	50	336.8741660839779	1007.6006688521338	3	336.8743591308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GSVYITLKK_	ENSG00000140319|ENST00000267884|SRP14;ENST00000558243.1_1_15:40330963-40331317:-|nuORF;ENST00000558527.5_1_15:40329525-40331317:-|nuORF;ENST00000559475.5_1_15:40329218-40331146:-|nuORF	60.11826168202944	0.21262886028301267	2				NaN	NaN	0	NaN	5867	3254	9116
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9137	26.475	NaN	15284	30	0	6154	0.214				-1	 	0	72	395.22008120695097	1182.638414221053	3	395.22039794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5878	3257	9136
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9138	26.478	NaN	8387.6	30	0	2380.4	0.106	+			14968	GTMTGMLYK	9	65	509.2399662279135	1016.465379522627	2	509.2407531738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_GTM(Oxidation (M))TGMLYK_	ENSG00000178440|ENST00000651763|TIMM23B-AGAP6;ENSG00000204152|ENST00000651259|TIMM23B;ENSG00000265354|ENST00000580018|TIMM23;nc|ENSG00000204152|Q5SRD1-2|TIMM23B	107.00750918261382	0.032051501805654005	2				NaN	NaN	0	NaN	5879	3257	9136
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9139	26.48	NaN	6658.3	30	0	1616.8	0.106	+			22080	KSLKYAIQ	8	72	475.7866400909851	949.5587272487702	2	475.7867736816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KSLKYAIQ_	tr|U7ST80|U7ST80_FUSNUFormiminotetrahydrofolatecyclodeaminaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01323PE=4SV=1	53.351449002276354	0.5676011784961348	2				NaN	NaN	0	NaN	5880	3257	9136
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9140	26.482	NaN	14748	30	0	4049.9	0.106			+	33926	RRWRQRKPG	9	75	413.914548332046	1238.721815596338	3	413.91497802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RRWRQRKPG_	REV__FRMPD4|p.A947Qfs*130|1|0.42|ENSG00000169933|chrX:12717658-12717658|C/-|frameshift_variant	26.69291269510374	0.5537881896960711	2				NaN	NaN	0	NaN	5881	3257	9136
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9141	26.484	NaN	9361.5	30	0	1159.8	0.106	+			42832	TEDGSRVTL	9	86	489.2480189872371	976.4814850412743	2	489.2483215332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TEDGSRVTL_	ENSG00000183576|ENST00000331768|SETD3;ENST00000489770.1_1_14:99866590-99879383:-|nuORF;nc|ENSG00000183576|Q86TU7-2|SETD3;nc|ENSG00000183576|Q86TU7-3|SETD3	51.52775601994872	0.28504342437107444	2				NaN	NaN	0	NaN	5882	3257	9136
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9142	26.486	NaN	5432.9	30	0	1309.3	0.037	+			48418	VTIPAGATHIL	11	50	364.8848567512822	1091.6327408540467	3	364.88525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTIPAGATHIL_	ENSG00000158859|ENST00000367996|ADAMTS4	25.125986553469783	0.7262400895305658	2				NaN	NaN	0	NaN	5883	3257	9136
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9143	26.486	NaN	9282.4	30	0	4662.7	0.144	+			6271	AVSMNVFREED	11	62	432.8682052366426	1295.5827863101279	3	432.8684997558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AVSMNVFREED_	RNF17|p.K610N|1|0.23|ENSG00000132972|chr13:24802452-24802452|A/C|missense_variant	26.749707702089633	0.7092085788826945	2				NaN	NaN	0	NaN	5884	3257	9136
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9157	26.517	NaN	20854	30	0	4504.8	0.214				-1	 	0	74	464.24218281254497	926.46981269189	2	464.242431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5895	3260	9156
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9158	26.52	NaN	21506	30	0	3608.6	0.106			+	3259	ASLIGSTAAK	10	90	459.7664440204234	NaN	0	459.7662658691406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASLIGSTAAK_	REV__ENSG00000176894|ENST00000317479|PXMP2;REV__PXMP2-DDB2|1|fusion;REV__PXMP2|p.E62Kfs*12|1|0.09|ENSG00000176894|chr12:132690318-132690318|A/-|frameshift_variant	39.252832667884924	0.37128895876774715	2				NaN	NaN	0	NaN	5896	3260	9156
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9159	26.522	NaN	21281	30	0	3629.4	0.106			+	26194	LSRTRRFE	8	78	532.8021510540988	1063.5897491749975	2	532.803466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSRTRRFE_	REV__ENSG00000008130|ENST00000341426|NADK;REV__ENST00000460602.5_1_1:1688544-1696851:-|nuORF;REV__ENST00000464373.1_1_1:1693389-1696851:-|nuORF;REV__ENST00000492845.6_1_1:1687687-1696851:-|nuORF;REV__NADK|p.G183Efs*30|1|0.42|ENSG00000008130|chr1:1756295-1756295|C/-|frameshift_variant;REV__NADK|p.Q85Rfs*14|1|0.29|ENSG00000008130|chr1:1761962-1761962|G/-|frameshift_variant;REV__nc|ENSG00000008130|O95544-2|NADK	94.00642277110589	0.2653416297186628	2				NaN	NaN	0	NaN	5897	3260	9156
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9160	26.524	NaN	19088	30	0	3484.7	0.106				-1	 	0	71	553.8005328469854	1105.5865127607708	2	553.8016357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5898	3260	9156
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9161	26.526	NaN	13947	30	0	5497.3	0.106	+			25582	LQGASTQASSM	11	77	540.7519921561334	1079.4894313790667	2	540.7533569335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LQGASTQASSM_	CCP110|p.K639Ffs*17|1|0.29|ENSG00000103540|chr16:19537582-19537583|-/ATTTCCA|frameshift_variant;CCP110|p.N549Tfs*6|1|0.53|ENSG00000103540|chr16:19537310-19537310|A/-|frameshift_variant;CCP110|p.S647Afs*4|1|0.31|ENSG00000103540|chr16:19540673-19540673|A/-|frameshift_variant;ENSG00000103540|ENST00000694978|CCP110;nc|ENSG00000103540|O43303|CCP110	54.722347961057174	0.3705654281804646	2				NaN	NaN	0	NaN	5899	3260	9156
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9162	26.528	NaN	9470.3	30	0	2242.9	0.034				-1	 	0	69	472.27619056484843	942.5378281964969	2	472.2762451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5900	3260	9156
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9163	26.528	NaN	21824	30	0	6615.8	0.138	+			40594	SVAGLSVTK	9	72	431.2552923300918	860.4960317269836	2	431.2553405761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVAGLSVTK_	ENSG00000197841|ENST00000492450|ZNF181;ZNF181|p.K248Sfs*36|1|0.29|ENSG00000197841|chr19:34741122-34741125|CAAA/-|frameshift_variant;ZNF181|p.V107Lfs*2|1|0.15|ENSG00000197841|chr19:34740695-34740695|A/-|frameshift_variant;ZNF181|p.Y52H|1|0.07|ENSG00000197841|chr19:34739546-34739546|T/C|missense_variant	104.0567914643314	0.03506238181059741	2				NaN	NaN	0	NaN	5901	3260	9156
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9176	26.557	NaN	14371	30	0	3849	0.214			+	4156	ATEVQIGIS	9	75	459.2498711793812	916.4851894255625	2	459.25030517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATEVQIGIS_	REV__nc|ENSG00000198010|Q9P1A6-2|DLGAP2	85.16082228582465	0.07850854922700509	2				NaN	NaN	0	NaN	5911	3263	9175
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9177	26.561	NaN	11227	30	0	2951	0.106			+	24174	LENTITGKP	9	80	486.77039994435125	971.5262469555025	2	486.7713317871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LENTITGKP_	REV__EMCN|p.N178Mfs*22|1|0.3|ENSG00000164035|chr4:100423056-100423056|T/-|frameshift_variant;REV__ENSG00000164035|ENST00000296420|EMCN;REV__ENST00000506323.1_1_4:101395197-101439143:-|nuORF;REV__nc|ENSG00000164035|Q9ULC0-2|EMCN;REV__nc|ENSG00000164035|Q9ULC0-3|EMCN	93.1432384553994	0.056003526918089595	2				NaN	NaN	0	NaN	5912	3263	9175
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9178	26.563	NaN	17879	30	0	2346.3	0.106	+			22734	KVAVVLIQK	9	87	499.34157070852217	996.6685884838444	2	499.341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KVAVVLIQK_	ENSG00000168538|ENST00000334690|TRAPPC11;ENST00000509857.5_1_4:184585182-184595983:+|nuORF;nc|ENSG00000168538|Q7Z392-3|TRAPPC11;nc|ENSG00000168538|Q7Z392-4|TRAPPC11;TRAPPC11|p.T366Pfs*9|1|0.25|ENSG00000168538|chr4:183680246-183680246|A/-|frameshift_variant	141.52041321563706	0.009766778904176347	2				NaN	NaN	0	NaN	5913	3263	9175
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9179	26.565	NaN	8566.6	30	0	1197.8	0.106	+			26543	LTRTSLPQL	9	77	514.8079881584952	1027.6014233837902	2	514.80859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LTRTSLPQL_	ENSG00000170396|ENST00000302277|ZNF804A	43.650786325866115	0.37743712540499297	2				NaN	NaN	0	NaN	5914	3263	9175
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9180	26.567	NaN	24862	30	0	5680	0.106				-1	 	0	70	414.89764680532085	1241.6711110161625	3	414.8980407714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5915	3263	9175
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9181	26.568	NaN	6370.3	30	0	973.85	0.036	+			37281	SLAKEIQYL	9	64	355.5374330886087	1063.590469866026	3	355.5377197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLAKEIQYL_	ENSG00000128272|ENST00000674920|ATF4	29.14955571784316	0.5308295550522326	2				NaN	NaN	0	NaN	5916	3263	9175
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9182	26.569	NaN	17405	30	0	3572.4	0.14	+			42892	TEHEKVAIL	9	69	520.2922869369845	1038.570020940769	2	520.2928466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TEHEKVAIL_	ENSG00000142039|ENST00000269967|CCDC97	82.7504851949679	0.08565546331141553	2				NaN	NaN	0	NaN	5917	3263	9175
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9200	26.608	NaN	173970	30	0	133000	0.214				-1	 	0	72	322.19340854609015	642.3722641589803	2	322.1936340332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5932	3266	9199
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9201	26.612	NaN	17653	30	0	4126.7	0.106	+			23956	LDSLIQNV	8	79	451.2514572505039	900.4883615678078	2	451.750732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LDSLIQNV_	N4BP2|p.A149V|1|0.35|ENSG00000078177|chr4:40102291-40102291|C/T|missense_variant	47.657333605630114	0.6087971902037268	2				NaN	NaN	0	NaN	5933	3266	9199
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9202	26.614	NaN	15223	30	0	5535.6	0.106	+			40181	STQTALTLK	9	68	481.77828225840983	961.5420115836197	2	481.7792663574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STQTALTLK_	ENSG00000172123|ENST00000304905|SLFN12;SLFN12|p.V491Cfs*4|1|0.28|ENSG00000172123|chr17:35411605-35411605|T/-|frameshift_variant	133.9934435666947	0.013297982075521412	2				NaN	NaN	0	NaN	5934	3266	9199
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9203	26.616	NaN	5035.3	30	0	569.02	0.106	+			35145	SAIASTKVM	9	53	454.24878312743175	906.4830133216635	2	454.24932861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SAIASTKVM_	ENSG00000104442|ENST00000276569|ARMC1;nc|ENSG00000104442|Q9NVT9-2|ARMC1	78.26377905018397	0.10505600812668463	2				NaN	NaN	0	NaN	5935	3266	9199
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9204	26.618	NaN	5742.8	30	0	823.18	0.106				-1	FSKCAWGK	8	66	492.2426339008491	982.4707148684982	2	492.7447204589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_FSKC(Carbamidomethyl (C))AWGK_	ENSG00000136205|ENST00000311160|TNS3;nc|ENSG00000136205|Q68CZ2-2|TNS3;TNS3|p.L1417Cfs*22|1|0.13|ENSG00000136205|chr7:47278165-47278165|G/-|frameshift_variant;TNS3|p.S1335Gfs*89|1|0.09|ENSG00000136205|chr7:47283791-47283792|-/CAGGGCCTTCATCCTGGACCAGGGTGATGCC|frameshift_variant	29.14955571784316	0.7342621283720113	2				NaN	NaN	0	NaN	5936	3266	9199
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9205	26.619	NaN	2998.7	30	0	578.31	0.037	+			20195	KELEGKINSL	10	63	565.8240542543563	1129.6335555755124	2	565.8251342773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KELEGKINSL_	ENSG00000135968|ENST00000309863|GCC2;GCC2|p.L712Cfs*16|1|0.49|ENSG00000135968|chr2:108471458-108471458|T/-|frameshift_variant	73.90049950687481	0.24545335595283982	2				NaN	NaN	0	NaN	5937	3266	9199
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9206	26.62	NaN	6296.7	30	0	783.56	0.14	+			20331	KERELELK	8	73	522.8055907434696	1043.596628553739	2	522.8067016601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KERELELK_	ENSG00000143294|ENST00000271526|PRCC;ENST00000469071.1_1_1:156767061-156770249:+|nuORF	79.71258880314673	0.32596852995588826	2				NaN	NaN	0	NaN	5938	3266	9199
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9220	26.651	NaN	24633	30	0	4519.2	0.214	+			31028	QETTYNLFT	9	72	372.8451935526974	1115.5137512582924	3	372.845458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QETTYNLFT_	nc|ENSG00000293505|Q96P88|GNRHR2	29.14955571784316	0.5308295550522326	2				NaN	NaN	0	NaN	5949	3269	9219
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9221	26.654	NaN	20662	30	0	2909.7	0.106			+	20264	KENDYSITF	9	78	558.7640197200159	1115.5134865068317	2	558.764892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KENDYSITF_	REV__ENSG00000164465|ENST00000338728|DCBLD1;REV__nc|ENSG00000164465|Q8N8Z6-2|DCBLD1	65.46538089061403	0.16805504838372562	2				NaN	NaN	0	NaN	5950	3269	9219
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9222	26.656	NaN	8440.9	30	0	1588.5	0.106	+			38935	SSQNFTLTK	9	64	513.2666549986733	1024.5187570641465	2	513.2669677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSQNFTLTK_	CCNJL|p.V393Rfs*8|1|0.23|ENSG00000135083|chr5:160253509-160253510|-/G|frameshift_variant;ENSG00000135083|ENST00000257536|CCNJL;ENST00000377503.6_1_5:159681329-159707642:-|nuORF;nc|ENSG00000135083|Q8IV13|CCNJL	142.36107225718385	0.009372392051035914	2				NaN	NaN	0	NaN	5951	3269	9219
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9223	26.658	NaN	18616	30	0	5379.9	0.106	+			31528	QLKGLEDTK	9	79	516.2897659752457	1030.5649790172913	2	516.290283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QLKGLEDTK_	ENSG00000083642|ENST00000315596|PDS5B;ENSG00000121892|ENST00000303538|PDS5A;ENST00000498550.5_1_13:33222909-33262824:+|nuORF;nc|ENSG00000083642|Q9NTI5-2|PDS5B;nc|ENSG00000083642|Q9NTI5-3|PDS5B;nc|ENSG00000121892|Q29RF7-3|PDS5A;PDS5B|p.G721Dfs*35|1|0.13|ENSG00000083642|chr13:32732132-32732132|A/-|frameshift_variant;PDS5B|p.K1268Rfs*8|1|0.07|ENSG00000083642|chr13:32770296-32770296|A/-|frameshift_variant;PDS5B|p.K1287Rfs*22|1|0.26|ENSG00000083642|chr13:32770351-32770351|A/-|frameshift_variant;PDS5B|p.K693Qfs*8|1|0.11|ENSG00000083642|chr13:32710054-32710055|-/T|frameshift_variant;PDS5B|p.N1390Cfs*12|1|0.44|ENSG00000083642|chr13:32770750-32770751|AA/-|frameshift_variant;PDS5B|p.S1198Vfs*10|1|0.28|ENSG00000083642|chr13:32764556-32764556|A/-|frameshift_variant	84.9155231211612	0.07920012719736333	2				NaN	NaN	0	NaN	5952	3269	9219
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9224	26.66	NaN	8410.8	30	0	1217.3	0.106			+	24860	LKEEPTSLT	9	74	509.2762196081147	1016.5378862830294	2	509.27691650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LKEEPTSLT_	REV__ENSG00000084652|ENST00000373610|TXLNA;REV__ENSG00000086712|ENST00000380122|TXLNG;REV__ENST00000538014.2_1_Y:21751423-21751552:+|nuORF;REV__nc|ENSG00000291033|Q9BZA5|TXLNGY	77.31757898189308	0.1091473830098891	2				NaN	NaN	0	NaN	5953	3269	9219
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9225	26.662	NaN	5778.5	30	0	1714.7	0.034	+			31031	QEVAIKQM	8	70	473.75409553712774	945.4936381410555	2	473.75439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QEVAIKQM_	ENSG00000077264|ENST00000372007|PAK3;ENSG00000149269|ENST00000356341|PAK1;nc|ENSG00000077264|O75914-3|PAK3;nc|ENSG00000077264|O75914-4|PAK3;nc|ENSG00000077264|O75914|PAK3;nc|ENSG00000149269|Q13153-2|PAK1	74.25504064058377	0.37144338840759816	2				NaN	NaN	0	NaN	5954	3269	9219
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9226	26.662	NaN	4864.4	30	0	660.06	0.139				-1	 	0	64	485.2383985012675	968.462244069335	2	485.2386169433594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5955	3269	9219
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9241	26.696	NaN	9522.6	30	0	1479.8	0.214	+			6435	AVYADSGNFK	10	77	536.2582632555747	1070.5019735779492	2	536.2593994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVYADSGNFK_	ENSG00000145780|ENST00000274457|FEM1C	74.1650062923329	0.2432923583094885	2				NaN	NaN	0	NaN	5967	3272	9240
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9242	26.699	NaN	9460.2	30	0	2766.5	0.106	+			44752	TTMTGTVLK	9	71	476.2610559643502	950.5075589955004	2	476.2623596191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTMTGTVLK_	ENSG00000167323|ENST00000526596|STIM1;ENST00000533445.1_1_11:4076769-4103426:+|nuORF;nc|ENSG00000167323|Q13586-2|STIM1;nc|ENSG00000167323|Q13586|STIM1	85.16082228582465	0.07850854922700509	2				NaN	NaN	0	NaN	5968	3272	9240
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9243	26.701	NaN	11088	30	0	2529.7	0.106				-1	 	0	75	489.29753568012364	976.5805184270473	2	489.2978820800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5969	3272	9240
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9244	26.703	NaN	8525.7	30	0	1514.8	0.106				-1	TQRTRESIM	9	71	379.8606654167145	1136.5601668503434	3	379.8610534667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_TQRTRESIM(Oxidation (M))_	ENST00000460256.1_1_2:210944586-210968875:-|nuORF	22.579656572578934	0.5922287541734749	2				NaN	NaN	0	NaN	5970	3272	9240
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9245	26.705	NaN	3599.4	30	0	499.23	0.106	+			45582	TYNQKHSLF	9	59	569.2868155739525	1136.5590782147049	2	569.28857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TYNQKHSLF_	ENSG00000165175|ENST00000614558|MID1IP1	37.81151784470057	0.4459294069877048	2				NaN	NaN	0	NaN	5971	3272	9240
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9246	26.707	NaN	2831.5	30	0	236.37	0.036	+			19991	KEIEAMHSL	9	61	529.2703150086083	1056.5260770840166	2	529.271728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KEIEAMHSL_	ENSG00000073614|ENST00000399788|KDM5A;KDM5A|p.G1200Dfs*9|1|0.28|ENSG00000073614|chr12:307787-307787|T/-|frameshift_variant;nc|ENSG00000073614|P29375-2|KDM5A	40.77816245573522	0.41113185337114944	2				NaN	NaN	0	NaN	5972	3272	9240
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9247	26.707	NaN	2135.2	30	0	889.5	0.144			+	-1	VGKKCRKR	8	46	344.5462536769518	1030.6169316310554	3	344.54656982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_VGKKC(Carbamidomethyl (C))RKR_	REV__ENST00000505450.5_1_4:16085656-16085833:-|nuORF	25.450171626174864	0.7628259754767981	2				NaN	NaN	0	NaN	5973	3272	9240
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9261	26.739	NaN	20024	30	0	6131.2	0.214	+			5031	ATSEIFASK	9	77	477.2505052975432	952.4864576618864	2	477.250244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSEIFASK_	ENSG00000005810|ENST00000544440|MYCBP2;MYCBP2|p.C1064Ifs*31|1|0.09|ENSG00000005810|chr13:77211267-77211279|TTATCAGAAGGCA/-|frameshift_variant;MYCBP2|p.N1867Tfs*9|1|0.15|ENSG00000005810|chr13:77171572-77171572|T/-|frameshift_variant;MYCBP2|p.N3049*|1|0.11|ENSG00000005810|chr13:77097894-77097895|TT/-|frameshift_variant;MYCBP2|p.P4047Qfs*26|2|0.35|ENSG00000005810|chr13:77067782-77067782|G/-|frameshift_variant;MYCBP2|p.T1507Ffs*24|1|0.04|ENSG00000005810|chr13:77185189-77185190|-/TTGTAAA|frameshift_variant;MYCBP2|p.T4311Pfs*37|1|0.14|ENSG00000005810|chr13:77059619-77059619|G/-|frameshift_variant;MYCBP2|p.V3749*|1|0.12|ENSG00000005810|chr13:77081486-77081486|C/-|frameshift_variant;nc|ENSG00000005810|O75592-2|MYCBP2	120.30596017624542	0.02101454110788768	2				NaN	NaN	0	NaN	5984	3275	9260
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9262	26.742	NaN	17136	30	0	2361	0.106			+	10893	FCQCTFLF	8	83	561.7414072683571	1121.468261603514	2	561.742431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_FC(Carbamidomethyl (C))QC(Carbamidomethyl (C))TFLF_	REV__ENST00000553148.1_1_12:100711499-100717500:+|nuORF	96.04771818265245	0.25916207331555047	2				NaN	NaN	0	NaN	5985	3275	9260
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9263	26.744	NaN	18754	30	0	1849.8	0.106	+			42371	TAINASRAL	9	66	458.7635568211981	915.5125607091962	2	458.7637634277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TAINASRAL_	ENSG00000174373|ENST00000680220|RALGAPA1;ENST00000443361.1_1_9:108287470-108288637:+|nuORF;nc|ENSG00000174373|Q6GYQ0-2|RALGAPA1;nc|ENSG00000174373|Q6GYQ0-5|RALGAPA1;nc|ENSG00000174373|Q6GYQ0-6|RALGAPA1;nc|ENSG00000174373|Q6GYQ0-7|RALGAPA1;nc|ENSG00000174373|Q6GYQ0|RALGAPA1	81.52500206392136	0.09095445986635249	2				NaN	NaN	0	NaN	5986	3275	9260
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9264	26.746	NaN	4767.1	30	0	363.42	0.106			+	17645	IEKFAATGPL	10	68	523.7972013474773	1045.5798497617545	2	523.7992553710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IEKFAATGPL_	REV__ENSG00000049323|ENST00000404816|LTBP1;REV__LTBP1|p.R1505Sfs*11|1|0.05|ENSG00000049323|chr2:33364330-33364331|-/TATTACTAAAGAA|frameshift_variant;REV__nc|ENSG00000049323|Q14766-2|LTBP1;REV__nc|ENSG00000049323|Q14766-4|LTBP1;REV__nc|ENSG00000049323|Q14766-5|LTBP1	49.44154591367651	0.46214596422418036	2				NaN	NaN	0	NaN	5987	3275	9260
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9265	26.748	NaN	4090.4	30	0	780.12	0.106				-1	 	0	77	579.7743039633399	1157.5340549934797	2	579.7753295898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5988	3275	9260
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9266	26.75	NaN	7925.4	30	0	709.57	0.033	+			46714	VGLSLKEQ	8	77	437.2553978579977	872.4962427827954	2	437.25555419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VGLSLKEQ_	ENSG00000105639|ENST00000458235|JAK3;ENST00000526008.5_1_19:17949989-17958765:-|nuORF;ENST00000527031.5_1_19:17947866-17955268:-|nuORF;ENST00000528293.1_1_19:17953834-17954275:-|nuORF;nc|ENSG00000105639|P52333-2|JAK3;nc|ENSG00000105639|P52333-4|JAK3	71.29570347882199	0.39610197767395533	2				NaN	NaN	0	NaN	5989	3275	9260
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9267	26.75	NaN	11008	30	0	1152.8	0.139	+			19620	KDIDIHEV	8	78	484.7556637216329	967.4967745100658	2	484.7558288574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KDIDIHEV_	ENSG00000153187|ENST00000640218|HNRNPU;nc|ENSG00000153187|Q00839-2|HNRNPU	44.377184641726394	0.6291511924298419	2				NaN	NaN	0	NaN	5990	3275	9260
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9283	26.786	NaN	74790	30	0	9225.9	0.214				-1	 	0	88	483.7658626857312	965.5171724382624	2	483.7661437988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6003	3278	9282
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9284	26.789	NaN	59686	30	0	17523	0.106	+			35566	SAWWGPGGRR	10	88	377.1924470874387	1128.5555118625161	3	377.1926574707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAWWGPGGRR_	ENST00000582668.1_1_17:73267497-73269738:+|nuORF;ENST00000585075.1_1_17:73267491-73267800:+|nuORF	40.05817265558897	0.5486090488315611	2				NaN	NaN	0	NaN	6004	3278	9282
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9285	26.791	NaN	7532.5	30	0	2280.8	0.106	+			30941	QELQLKEA	8	62	479.7636102635385	NaN	0	479.7635803222656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QELQLKEA_	ENST00000368528.3_1_3:27674554-27675208:+|nuORF	90.36981228632155	1.7418937515398478	2				NaN	NaN	0	NaN	6005	3278	9282
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9286	26.793	NaN	17612	30	0	2807	0.106	+			41692	SVSDLAPPR	9	73	471.25583862671	940.49712432022	2	471.2560119628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVSDLAPPR_	ENSG00000166295|ENST00000299381|ANAPC16	101.60071028292904	0.0375685401170269	2				NaN	NaN	0	NaN	6006	3278	9282
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9287	26.795	NaN	4467	30	0	640.5	0.106	+			22003	KSFSTVTNT	9	67	492.752144042872	983.489735152544	2	492.75274658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KSFSTVTNT_	ENSG00000276231|ENST00000619866|PIK3R6	68.84614121027924	0.14577793175421136	2				NaN	NaN	0	NaN	6007	3278	9282
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9288	26.797	NaN	11550	30	0	2183.9	0.036	+			38174	SQCEFSMGK	9	79	537.2221809932663	1072.4298090533325	2	537.2235717773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_SQC(Carbamidomethyl (C))EFSMGK_	ENSG00000163634|ENST00000295899|THOC7;ENST00000487570.1_1_3:63824036-63825384:-|nuORF;THOC7|p.M198Ifs*5|1|0.05|ENSG00000163634|chr3:63834152-63834153|CC/-|frameshift_variant;THOC7|p.N115Kfs*6|1|0.12|ENSG00000163634|chr3:63837983-63837984|-/T|frameshift_variant;THOC7|p.Q105Afs*16|1|0.29|ENSG00000163634|chr3:63838016-63838017|-/T|frameshift_variant	94.4091291819064	0.0524345700464502	2				NaN	NaN	0	NaN	6008	3278	9282
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9289	26.797	NaN	6679.7	30	0	919.1	0.142	+			38321	SRFLGHHFH	9	78	569.2868155739525	1136.5590782147049	2	570.2835693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SRFLGHHFH_	THG1L|p.V7Gfs*36|1|0.31|ENSG00000113272|chr5:157731457-157731461|AAGTT/-|frameshift_variant	34.172542307311794	0.4838870758800184	2				NaN	NaN	0	NaN	6009	3278	9282
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9303	26.829	NaN	23022	30	0	2582.7	0.214	+			35948	SEGPKVVSV	9	84	451.2514572505039	900.4883615678078	2	451.2528076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEGPKVVSV_	ENSG00000143373|ENST00000336715|ZNF687;nc|ENSG00000143373|Q8N1G0-2|ZNF687;ZNF687|p.A639Pfs*74|1|0.27|ENSG00000143373|chr1:151288202-151288202|G/-|frameshift_variant;ZNF687|p.H733Mfs*30|1|0.58|ENSG00000143373|chr1:151288603-151288603|C/-|frameshift_variant;ZNF687|p.P960Lfs*23|1|0.3|ENSG00000143373|chr1:151289915-151289915|G/-|frameshift_variant;ZNF687|p.R871Gfs*29|1|0.1|ENSG00000143373|chr1:151289512-151289512|A/-|frameshift_variant;ZNF687|p.R939Vfs*10|1|0.08|ENSG00000143373|chr1:151289852-151289852|C/-|frameshift_variant	82.7504851949679	0.08565546331141553	2				NaN	NaN	0	NaN	6020	3281	9302
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9304	26.832	NaN	101490	30	0	34425	0.106	+			15136	GTSEFITGK	9	89	470.2425426133001	938.4705322934002	2	470.2424011230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTSEFITGK_	ENSG00000110002|ENST00000456829|VWA5A;VWA5A|p.D571Mfs*3|1|0.56|ENSG00000110002|chr11:124137094-124137094|A/-|frameshift_variant	141.52041321563706	0.009766778904176347	2				NaN	NaN	0	NaN	6021	3281	9302
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9305	26.834	NaN	27329	30	0	6111.5	0.106	+			29320	NYQNVVHKL	9	73	372.20473657500804	1113.5923803252242	3	372.2048645019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NYQNVVHKL_	ENSG00000146463|ENST00000314607|ZMYM4;nc|ENSG00000146463|Q5VZL5-2|ZMYM4;nc|ENSG00000146463|Q5VZL5-3|ZMYM4;nc|ENSG00000146463|Q5VZL5-4|ZMYM4;ZMYM4|p.A956Sfs*68|1|0.38|ENSG00000146463|chr1:35393690-35393691|-/A|frameshift_variant;ZMYM4|p.D1229Ifs*2|1|0.12|ENSG00000146463|chr1:35405175-35405175|G/-|frameshift_variant;ZMYM4|p.N1222Kfs*15|1|0.25|ENSG00000146463|chr1:35405154-35405155|-/A|frameshift_variant;ZMYM4|p.Y806Ifs*12|1|0.16|ENSG00000146463|chr1:35389058-35389059|-/A|frameshift_variant	54.776311868738084	0.25715957988447635	2				NaN	NaN	0	NaN	6022	3281	9302
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9306	26.836	NaN	24266	30	0	3583.7	0.106			+	9950	ERAWVDTSI	9	104	538.7729171205286	1075.5312813078572	2	538.774169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ERAWVDTSI_	REV__EIF4A3|p.G340E|1|0.17|ENSG00000141543|chr17:80136300-80136300|C/T|missense_variant	52.936696900407355	0.27249468807391813	2				NaN	NaN	0	NaN	6023	3281	9302
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9307	26.838	NaN	93926	30	0	50628	0.106	+			30844	QEGAKMAVRL	10	80	368.2057774587025	1101.5955029763077	3	368.2060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QEGAKMAVRL_	CTNNB1|p.L301Hfs*16|1|0.05|ENSG00000168036|chr3:41225827-41225831|TTCAA/-|frameshift_variant;ENSG00000168036|ENST00000349496|CTNNB1;ENSG00000173801|ENST00000393931|JUP	51.52775601994872	0.4429225830406686	2				NaN	NaN	0	NaN	6024	3281	9302
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9308	26.84	NaN	15385	30	0	990.4	0.035			+	30984	QERIAEQL	8	82	493.7660194023643	985.5174858715286	2	493.7665710449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QERIAEQL_	REV__CCDC51|p.A252V|1|0.25|ENSG00000164051|chr3:48432889-48432889|G/A|missense_variant;REV__ENSG00000164051|ENST00000395694|CCDC51;REV__nc|ENSG00000164051|Q96ER9-2|CCDC51	133.8126618989323	0.23527224284755519	2				NaN	NaN	0	NaN	6025	3281	9302
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9309	26.84	NaN	10405	30	0	1004.4	0.139	+			41344	SVLVSAGNVK	10	77	487.2874006317829	NaN	0	487.28729248046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVLVSAGNVK_	DYNC1H1|p.F2635Lfs*67|1|0.16|ENSG00000197102|chr14:102017141-102017141|T/-|frameshift_variant;DYNC1H1|p.K3112Hfs*3|1|0.31|ENSG00000197102|chr14:102027998-102027999|-/TCACAAG|frameshift_variant;DYNC1H1|p.W4201Gfs*43|1|0.42|ENSG00000197102|chr14:102043958-102043958|G/-|frameshift_variant;ENSG00000197102|ENST00000360184|DYNC1H1	101.45984612302182	0.010523654147385104	2				NaN	NaN	0	NaN	6026	3281	9302
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9321	26.869	NaN	36150	30	0	3819.4	0.214	+			34750	RYASINTHL	9	96	537.7875103441338	1073.5604677550675	2	537.7889404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RYASINTHL_	CSNK1D|p.R358Gfs*12|1|0.25|ENSG00000141551|chr17:82249000-82249000|G/-|frameshift_variant;CSNK1D|p.T344Hfs*26|1|0.26|ENSG00000141551|chr17:82249459-82249459|G/-|frameshift_variant;ENSG00000141551|ENST00000314028|CSNK1D;ENSG00000213923|ENST00000396832|CSNK1E;ENST00000578904.1_1_17:80208040-80213403:-|nuORF;ENST00000581241.5_1_17:80206597-80211051:-|nuORF;ENST00000584377.5_1_17:80203885-80211156:-|nuORF;nc|ENSG00000141551|P48730-2|CSNK1D	66.96192283764107	0.15557981141143568	2				NaN	NaN	0	NaN	6035	3284	9320
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9322	26.872	NaN	17292	30	0	6640.2	0.106	+			34807	RYLEKPMEI	9	82	597.8126746114008	1193.6107962896015	2	597.8133544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_RYLEKPM(Oxidation (M))EI_	ENSG00000168610|ENST00000264657|STAT3;nc|ENSG00000168610|P40763-2|STAT3;nc|ENSG00000168610|P40763-3|STAT3;STAT3|p.R729Afs*3|2|0.33|ENSG00000168610|chr17:42316861-42316861|G/-|frameshift_variant	91.26522074875469	0.06129826844580791	2				NaN	NaN	0	NaN	6036	3284	9320
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9323	26.874	NaN	8295.7	30	0	1971.3	0.106	+			40101	STNWSDVGK	9	73	497.23544415887227	NaN	0	497.23541259765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STNWSDVGK_	ENSG00000165416|ENST00000310528|SUGT1;ENST00000609175.1_1_13:53261778-53261967:+|nuORF;nc|ENSG00000165416|Q9Y2Z0|SUGT1	117.5257442709337	0.0029007600543599623	2				NaN	NaN	0	NaN	6037	3284	9320
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9324	26.876	NaN	8868	30	0	4041.4	0.106			+	327	AAPSCSMAV	9	63	455.19317455686047	908.371796180521	2	455.19378662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_AAPSC(Carbamidomethyl (C))SM(Oxidation (M))AV_	REV__ENST00000399753.2_1_16:1991259-1993105:-|nuORF	65.80317337860623	0.1652391959156183	2				NaN	NaN	0	NaN	6038	3284	9320
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9325	26.878	NaN	15143	30	0	2734.2	0.106			+	32189	QSTGLAQLI	9	77	465.7661400347708	929.5177271363416	2	465.76617431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QSTGLAQLI_	REV__ENSG00000059691|ENST00000263985|GATB;REV__ENST00000515564.5_1_4:152622580-152640660:-|nuORF	71.87747018426188	0.13267044672804276	2				NaN	NaN	0	NaN	6039	3284	9320
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9326	26.88	NaN	19576	30	0	3678	0.037			+	50218	WNGGSRRPSI	10	90	565.2957903921562	1128.5770278511122	2	565.2968139648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_WNGGSRRPSI_	REV__ENST00000395270.5_1_7:72361184-72361244:+|nuORF	101.25262130126117	0.07397688119410509	2				NaN	NaN	0	NaN	6040	3284	9320
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9327	26.88	NaN	25542	30	0	7938	0.145			+	-1	LMVNRYVIQ	9	78	384.545863698923	1150.615761696969	3	384.5462646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_LM(Oxidation (M))VNRYVIQ_	REV__ENSG00000256223|ENST00000248211|ZNF10;REV__ZNF10|p.N46S|1|0.07|ENSG00000256223|chr12:133151131-133151131|A/G|missense_variant	30.317721548370564	0.5199124245378496	2				NaN	NaN	0	NaN	6041	3284	9320
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9339	26.907	NaN	46827	30	0	22672	0.214	+			14196	GSSASLVLK	9	72	431.25517547208364	860.4957980109673	2	431.255615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSSASLVLK_	ENSG00000075415|ENST00000552981|SLC25A3;ENST00000546766.5_1_12:98989476-98995303:+|nuORF;ENST00000547869.1_1_12:98994914-98995303:+|nuORF;ENST00000551123.5_1_12:98989412-98995303:+|nuORF;nc|ENSG00000075415|Q00325|SLC25A3	127.46168284122857	0.016682644177004526	2				NaN	NaN	0	NaN	6050	3287	9338
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9340	26.911	NaN	7601	30	0	1780.8	0.106	+			28520	NIEFITAGG	9	86	461.23646516555493	920.4583773979099	2	461.23748779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NIEFITAGG_	ENSG00000145555|ENST00000513610|MYO10;MYO10|p.G1223Rfs*28|1|0.25|ENSG00000145555|chr5:16694504-16694505|-/T|frameshift_variant;MYO10|p.I417Tfs*39|1|0.05|ENSG00000145555|chr5:16764326-16764327|-/ACAAATCTCTG|frameshift_variant;MYO10|p.N507Qfs*30|1|0.11|ENSG00000145555|chr5:16762613-16762614|-/TG|frameshift_variant;MYO10|p.S468Ffs*8|1|0.05|ENSG00000145555|chr5:16763679-16763680|-/A|frameshift_variant	58.78195531508484	0.22376836668196862	2				NaN	NaN	0	NaN	6051	3287	9338
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9341	26.913	NaN	16851	30	0	3460.5	0.106	+			3444	ASQNAQDLIGI	11	71	377.1990367338917	1128.5752808018751	3	377.1995544433594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASQNAQDLIGI_	ENSG00000110427|ENST00000658780|KIAA1549L;KIAA1549L|p.T1376Hfs*62|1|0.19|ENSG00000110427|chr11:33606771-33606772|-/C|frameshift_variant;KIAA1549L|p.T1376Pfs*16|1|0.38|ENSG00000110427|chr11:33606772-33606772|C/-|frameshift_variant;nc|ENSG00000110427|Q6ZVL6-2|KIAA1549L;nc|ENSG00000110427|Q6ZVL6|KIAA1549L	32.81241826257853	0.645615689454792	2				NaN	NaN	0	NaN	6052	3287	9338
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9342	26.914	NaN	4494.5	30	0	581.32	0.106			+	23672	LASKNQSLS	9	63	474.2614364340758	NaN	0	474.2615051269531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LASKNQSLS_	REV__ENSG00000160613|ENST00000320934|PCSK7	56.72105179125745	0.16330365735109603	2				NaN	NaN	0	NaN	6053	3287	9338
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9343	26.916	NaN	4621	30	0	746.49	0.106	+			33591	RLMSLPIAKK	10	52	386.24559356266025	1155.7149512881808	3	386.2462158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RLMSLPIAKK_	ENSG00000198663|ENST00000480824|C6orf89;nc|nan|Q6UWU4-2|C6orf89	38.714083909724	0.5609941533943991	2				NaN	NaN	0	NaN	6054	3287	9338
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9344	26.918	NaN	8919.6	30	0	1486.8	0.035	+			51171	YPGCTKVY	8	79	494.2333902461233	986.4522275590466	2	494.2340087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_YPGC(Carbamidomethyl (C))TKVY_	ENSG00000102554|ENST00000377687|KLF5;nc|ENSG00000102554|Q13887-2|KLF5;nc|ENSG00000102554|Q13887-4|KLF5	79.45101966838831	0.3281480470254892	2				NaN	NaN	0	NaN	6055	3287	9338
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9345	26.919	NaN	2586.8	30	0	322.79	0.142	+			34597	RVMQDIVYK	9	64	576.3155295731714	1150.6165062131427	2	576.3164672851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RVMQDIVYK_	ENSG00000115289|ENST00000233630|PCGF1;ENST00000475863.5_1_2:74732272-74734286:-|nuORF;ENST00000480844.2_1_2:74732736-74734502:-|nuORF;ENST00000496911.1_1_2:74733844-74734286:-|nuORF;nc|ENSG00000115289|Q9BSM1-3|PCGF1	37.50817390946774	0.44948750990682723	2				NaN	NaN	0	NaN	6056	3287	9338
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9359	26.95	NaN	33515	30	0	15591	0.214			+	-1	TGLKRCYCF	9	75	383.1838635045884	1146.5297611139652	3	383.1843566894531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_TGLKRC(Carbamidomethyl (C))YCF_	REV__ENSG00000159723|ENST00000290953|AGRP	40.77816245573522	0.41113185337114944	2				NaN	NaN	0	NaN	6067	3290	9358
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9360	26.954	NaN	7233.2	30	0	679.99	0.106			+	7468	DGAGEEEDGL	10	89	496.1958927505226	990.3772325678452	2	496.19647216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DGAGEEEDGL_	REV__ENSG00000153187|ENST00000640218|HNRNPU;REV__ENST00000476241.2_2_1:245025757-245027609:-|nuORF;REV__nc|ENSG00000153187|Q00839-2|HNRNPU	54.776311868738084	0.41334902933431344	2				NaN	NaN	0	NaN	6068	3290	9358
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9361	26.956	NaN	47262	30	0	24253	0.106	+			32355	QTYVGITEK	9	78	519.7767063971443	1037.5388598610884	2	519.7770385742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QTYVGITEK_	ENSG00000144028|ENST00000323853|SNRNP200	76.16968421966216	0.11411088698345859	2				NaN	NaN	0	NaN	6069	3290	9358
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9362	26.957	NaN	7411.4	30	0	1621.1	0.106				-1	 	0	82	493.77887830590765	985.5432036786153	2	493.7790832519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6070	3290	9358
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9363	26.959	NaN	9523.1	30	0	1745	0.106			+	15078	GTPVASHFGEQ	11	62	377.1802336619005	1128.5188715859015	3	377.1806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTPVASHFGEQ_	REV__nc|ENSG00000156711|O15264-2|MAPK13	36.446750945000026	0.6065623449959539	2				NaN	NaN	0	NaN	6071	3290	9358
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9364	26.961	NaN	5731.1	30	0	434.56	0.106	+			38092	SPTSPLNMK	9	70	487.7520290549179	973.4895051766358	2	487.75250244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SPTSPLNMK_	ENSG00000102038|ENST00000371121|SMARCA1;nc|ENSG00000102038|P28370-2|SMARCA1;nc|ENSG00000102038|P28370|SMARCA1;SMARCA1|p.K851Nfs*33|1|0.67|ENSG00000102038|chrX:129471216-129471216|T/-|frameshift_variant;SMARCA1|p.M710Wfs*6|1|0.37|ENSG00000102038|chrX:129487107-129487107|T/-|frameshift_variant;SMARCA1|p.N376Ifs*16|1|0.37|ENSG00000102038|chrX:129504774-129504774|T/-|frameshift_variant;SMARCA1|p.S298Ifs*14|1|0.76|ENSG00000102038|chrX:129508015-129508016|-/T|frameshift_variant;SMARCA1|p.T164Hfs*15|1|0.33|ENSG00000102038|chrX:129515933-129515933|T/-|frameshift_variant	47.657333605630114	0.33044192980041115	2				NaN	NaN	0	NaN	6072	3290	9358
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9365	26.963	NaN	5967.3	30	0	636.88	0.035	+			33065	REKIVEVM	8	72	502.2818955421748	1002.5492381511497	2	502.2838439941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_REKIVEVM_	ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2	56.72105179125745	0.5342425954139568	2				NaN	NaN	0	NaN	6073	3290	9358
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9379	26.992	NaN	18044	30	0	2644.2	0.214			+	2366	ANDIQLVANA	10	67	514.7717169832595	1027.5288810333188	2	514.7721557617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ANDIQLVANA_	REV__CON__Q7Z3Z0;REV__ENSG00000204897|ENST00000312150|KRT25	58.22992032128504	0.38193887838457763	2				NaN	NaN	0	NaN	6084	3293	9378
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9380	26.996	NaN	8689.9	30	0	1817.4	0.106	+			5625	AVCYQAITK	9	74	527.2727579269183	1052.5309629206365	2	527.27392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_AVC(Carbamidomethyl (C))YQAITK_	ENSG00000140632|ENST00000321919|GLYR1;nc|ENSG00000140632|Q49A26-3|GLYR1;nc|ENSG00000140632|Q49A26-4|GLYR1;nc|ENSG00000140632|Q49A26-5|GLYR1	101.25262130126117	0.03792372629710479	2				NaN	NaN	0	NaN	6085	3293	9378
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9381	26.998	NaN	7501.8	30	0	886.48	0.106			+	24481	LGGSSLTSLP	10	67	466.25794075687304	930.5013285805461	2	466.2579650878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LGGSSLTSLP_	REV__TMEM129|p.P123Hfs*42|1|0.1|ENSG00000168936|chr4:1718464-1718464|G/-|frameshift_variant	76.7741389293348	0.22197596950688292	2				NaN	NaN	0	NaN	6086	3293	9378
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9382	27	NaN	8996.5	30	0	1093	0.106	+			27527	MPADTNKAF	9	68	497.7362710583695	993.457989183539	2	497.7367248535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MPADTNKAF_	ENSG00000125037|ENST00000245046|EMC3;ENST00000487465.5_1_3:10011273-10028351:-|nuORF;nc|ENSG00000125037|Q9P0I2-2|EMC3	63.53385203322761	0.18415635464017938	2				NaN	NaN	0	NaN	6087	3293	9378
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9383	27.002	NaN	3720.4	30	0	2800	0.106				-1	 	0	38	322.19340854609015	642.3722641589803	2	322.193603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6088	3293	9378
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9384	27.003	NaN	5630.2	30	0	1204.8	0.036	+			50024	WDHYRIAL	8	63	537.2834655206373	NaN	0	537.2830200195312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_WDHYRIAL_	ENSG00000198089|ENST00000400288|SFI1;ENST00000382162.7_1_22:31904270-32000328:+|nuORF;nc|ENSG00000198089|A8K8P3-10|SFI1;nc|ENSG00000198089|A8K8P3-2|SFI1;nc|ENSG00000198089|A8K8P3-3|SFI1;nc|ENSG00000198089|A8K8P3-4|SFI1;nc|ENSG00000198089|A8K8P3-5|SFI1;nc|ENSG00000198089|A8K8P3-9|SFI1	40.5726180659479	1.7418937515398478	2				NaN	NaN	0	NaN	6089	3293	9378
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9385	27.004	NaN	8444.1	30	0	2290.2	0.146				-1	 	0	61	413.914548332046	1238.721815596338	3	413.9150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6090	3293	9378
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9396	27.031	NaN	58793	30	0	8376.1	0.215				-1	MSNVCPIQR	9	95	560.7650518070488	1119.5155506808976	2	560.7666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))SNVC(Carbamidomethyl (C))PIQR_	ENSG00000185775|ENST00000332857|SPATA31A6;ENSG00000204849|ENST00000377647|SPATA31A1;ENSG00000275969|ENST00000428649|SPATA31A3;ENSG00000276040|ENST00000619167|SPATA31A7;ENSG00000276581|ENST00000437823|SPATA31A5;SPATA31A1|p.T1192Nfs*14|1|0.28|ENSG00000204849|chr9:39361333-39361334|-/A|frameshift_variant;SPATA31A1|p.T1192Qfs*2|2|0.24|ENSG00000204849|chr9:39361334-39361334|A/-|frameshift_variant;SPATA31A3|p.S1180Kfs*9|1|0.25|ENSG00000275969|chr9:66986959-66986960|-/T|frameshift_variant;SPATA31A6|p.N1191Tfs*16|1|0.12|ENSG00000185775|chr9:42189269-42189269|A/-|frameshift_variant;SPATA31A6|p.T1188Qfs*2|1|0.26|ENSG00000185775|chr9:42189259-42189259|A/-|frameshift_variant	44.116797842482775	0.37197099687881774	2				NaN	NaN	0	NaN	6098	3296	9395
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9397	27.035	NaN	5454.1	30	0	901.36	0.106	+			23096	KVVEGSFVYK	10	73	578.3236717672705	1154.632790601341	2	578.3248901367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVVEGSFVYK_	ENSG00000203879|ENST00000447750|GDI1;ENST00000491154.1_1_X:153666748-153668487:+|nuORF	116.83681978309235	0.03179725977375137	2				NaN	NaN	0	NaN	6099	3296	9395
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9398	27.037	NaN	15404	30	0	3652.1	0.106	+			43664	TIYNAAIQK	9	86	511.2870727545704	1020.5595925759408	2	511.28778076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TIYNAAIQK_	ENSG00000164169|ENST00000322396|PRMT9;nc|ENSG00000164169|Q6P2P2-2|PRMT9	104.01359247289065	0.03510646158778409	2				NaN	NaN	0	NaN	6100	3296	9395
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9399	27.038	NaN	6191.3	30	0	546.54	0.106	+			27703	MPYSHPSSY	9	68	534.725685088702	1067.436817244204	2	534.7269897460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MPYSHPSSY_	ENSG00000164190|ENST00000282516|NIPBL;ENST00000504430.5_1_5:36961623-36995905:+|nuORF;nc|ENSG00000164190|Q6KC79-2|NIPBL;nc|ENSG00000164190|Q6KC79-3|NIPBL;NIPBL|p.F1423Lfs*15|1|0.43|ENSG00000164190|chr5:37008032-37008032|T/-|frameshift_variant;NIPBL|p.I2776Lfs*3|1|0.17|ENSG00000164190|chr5:37064797-37064797|A/-|frameshift_variant;NIPBL|p.K603Sfs*11|2|0.29|ENSG00000164190|chr5:36984981-36984981|A/-|frameshift_variant;NIPBL|p.L2220Ffs*3|1|0.21|ENSG00000164190|chr5:37048567-37048568|-/T|frameshift_variant;NIPBL|p.R505Efs*35|1|0.19|ENSG00000164190|chr5:36984687-36984687|A/-|frameshift_variant	138.24224950522367	0.011304696901763419	2				NaN	NaN	0	NaN	6101	3296	9395
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9400	27.04	NaN	8344.8	30	0	1614.5	0.106	+			11715	FSANGRPL	8	63	431.23438212837965	860.4542113235593	2	431.233642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FSANGRPL_	ENSG00000149480|ENST00000278823|MTA2;nc|ENSG00000149480|O94776-2|MTA2	79.45101966838831	0.3281480470254892	2				NaN	NaN	0	NaN	6102	3296	9395
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9401	27.042	NaN	4319.2	30	0	793.03	0.106	+			46213	VEAGGMQAL	9	58	446.21490374751033	890.4152545618207	2	446.21551513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_VEAGGM(Oxidation (M))QAL_	ENSG00000168036|ENST00000349496|CTNNB1;ENSG00000173801|ENST00000393931|JUP	60.11826168202944	0.21262886028301267	2				NaN	NaN	0	NaN	6103	3296	9395
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9402	27.044	NaN	999.4	30	0	82.776	0.037			+	-1	YLSVDSCSLK	10	52	586.286724231233	1170.558895529266	2	586.28759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_YLSVDSC(Carbamidomethyl (C))SLK_	REV__ENSG00000183310|ENST00000328782|OR2T34;REV__ENSG00000196539|ENST00000359594|OR2T3;REV__OR2T3|p.V289Cfs*2|1|0.13|ENSG00000196539|chr1:248474215-248474215|G/-|frameshift_variant	26.69291269510374	0.6618461711292317	2				NaN	NaN	0	NaN	6104	3296	9395
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9413	27.069	NaN	8436.1	30	0	985.91	0.214	+			3915	ATASAIEAMK	10	85	496.75704706573856	991.4995411982771	2	496.7573547363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATASAIEAMK_	ENSG00000100106|ENST00000644935|TRIOBP;nc|ENSG00000100106|Q9H2D6-2|TRIOBP;nc|ENSG00000100106|Q9H2D6-3|TRIOBP;nc|ENSG00000100106|Q9H2D6-5|TRIOBP;nc|ENSG00000100106|Q9H2D6-7|TRIOBP	128.60217544463768	0.01518043149187549	2				NaN	NaN	0	NaN	6112	3299	9412
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9414	27.072	NaN	10539	30	0	2733.5	0.106	+			28979	NSILHMWY	8	72	532.2553185246129	1062.4960841160257	2	532.2566528320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NSILHMWY_	DMXL2|p.H911Y|1|0.24|ENSG00000104093|chr15:51507167-51507167|G/A|missense_variant	45.9519527083369	0.6193794311207887	2				NaN	NaN	0	NaN	6113	3299	9412
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9415	27.074	NaN	6069.8	30	0	995.62	0.106	+			41112	SVISGINEK	9	76	473.76333370342593	NaN	0	473.76348876953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVISGINEK_	CYB561A3|p.A169T|1|0.32|ENSG00000162144|chr11:61353028-61353028|C/T|missense_variant;ENSG00000162144|ENST00000294072|CYB561A3;ENST00000540317.5_1_11:61120455-61129340:-|nuORF;ENST00000546151.5_1_11:61120455-61125280:-|nuORF;nc|ENSG00000162144|Q8NBI2-2|CYB561A3	45.02220120713402	0.24099765136254067	2				NaN	NaN	0	NaN	6114	3299	9412
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9416	27.076	NaN	5175.2	30	0	1843.9	0.106	+			2647	AQKTKHLE	8	65	477.77128586269447	953.528018792189	2	477.7716979980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AQKTKHLE_	ENSG00000125633|ENST00000376300|CCDC93;ENST00000460781.1_1_2:118709253-118753033:-|nuORF	37.15910966729921	0.6739408393984688	2				NaN	NaN	0	NaN	6115	3299	9412
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9417	27.078	NaN	5917	30	0	2706.1	0.106			+	44204	TRGQRMDITH	10	57	405.5397103548169	1213.5973016646508	3	405.5401306152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TRGQRMDITH_	REV__ENSG00000189037|ENST00000339042|DUSP21	25.125986553469783	0.6746423231557295	2				NaN	NaN	0	NaN	6116	3299	9412
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9418	27.079	NaN	4926.8	30	0	453.87	0.036	+			50845	YETSKMKVL	9	68	549.7960496226497	1097.5775463120992	2	549.7974243164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YETSKMKVL_	ENSG00000102316|ENST00000375068|MAGED2;nc|ENSG00000102316|Q9UNF1-2|MAGED2	80.45461616416974	0.09558281504443908	2				NaN	NaN	0	NaN	6117	3299	9412
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9419	27.08	NaN	1665.7	30	0	587.27	0.143				-1	REMDEQIRL	9	38	603.3004209284176	1204.586288923635	2	603.3009033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_REM(Oxidation (M))DEQIRL_	ENST00000413233.1_1_7:116612221-116612569:-|nuORF;ENST00000600996.1_1_19:42012510-42012810:+|nuORF;nc|ENSG00000143549|P06753-2|TPM3;nc|ENSG00000143549|P06753-3|TPM3;nc|ENSG00000143549|P06753-6|TPM3	22.579656572578934	0.5922287541734749	2				NaN	NaN	0	NaN	6118	3299	9412
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9431	27.108	NaN	25721	30	0	11681	0.214			+	-1	LSEFLMRKL	9	96	384.8858316823395	1151.6356656472185	3	384.88616943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LSEFLM(Oxidation (M))RKL_	REV__ENSG00000121486|ENST00000367506|TRMT1L	42.86426827375447	0.38666266728046506	2				NaN	NaN	0	NaN	6127	3302	9430
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9432	27.111	NaN	3370	30	0	624.46	0.106	+			8756	EEFTKNNSL	9	62	541.2608308570985	1080.507108780997	2	541.2618408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EEFTKNNSL_	ENSG00000198763|ENST00000361453|MT-ND2	49.536043120802724	0.308405419312776	2				NaN	NaN	0	NaN	6128	3302	9430
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9433	27.113	NaN	3944.3	30	0	545.93	0.106			+	27281	MGALFVPQN	9	74	488.75002220151487	975.4854914698298	2	488.7503356933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MGALFVPQN_	REV__ENSG00000138449|ENST00000261024|SLC40A1;REV__SLC40A1|p.L398Wfs*55|1|0.2|ENSG00000138449|chr2:189563794-189563794|G/-|frameshift_variant	50.0245360154114	0.3026755932229825	2				NaN	NaN	0	NaN	6129	3302	9430
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9434	27.115	NaN	6323.9	30	0	852.91	0.106	+			33598	RLPDERGPL	9	80	526.7952806275025	1051.576008321805	2	526.7965087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RLPDERGPL_	ENSG00000115457|ENST00000233809|IGFBP2;ENST00000436812.1_3_2:217526523-217528824:+|nuORF;ENST00000490362.1_1_2:217526523-217526805:+|nuORF;IGFBP2|p.E251K|1|0.3|ENSG00000115457|chr2:216661936-216661936|G/A|missense_variant	52.936696900407355	0.27249468807391813	2				NaN	NaN	0	NaN	6130	3302	9430
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9435	27.117	NaN	3309.5	30	0	1076.7	0.106				-1	 	0	52	420.2523176261334	838.4900823190668	2	420.25262451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6131	3302	9430
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9436	27.118	NaN	7920.5	30	0	2650.6	0.035			+	19657	KDLNKAAIQ	9	74	500.7912030010725	999.567853068945	2	500.792236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KDLNKAAIQ_	REV__ENSG00000125166|ENST00000245206|GOT2;REV__ENST00000492378.1_1_16:58756047-58768228:-|nuORF;REV__ENST00000496461.5_1_16:58752244-58768198:-|nuORF;REV__ENST00000564400.5_1_16:58750074-58768228:-|nuORF;REV__ENST00000568368.1_1_16:58756047-58768190:-|nuORF	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	6132	3302	9430
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9437	27.119	NaN	11771	30	0	5907.6	0.144			+	41500	SVPHVHHSWH	10	69	408.20135273952314	1221.5822288187694	3	408.2018127441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVPHVHHSWH_	REV__ENST00000478149.5_1_3:49898261-49898405:-|nuORF	35.15202426646627	0.5927656479315102	2				NaN	NaN	0	NaN	6133	3302	9430
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9451	27.151	NaN	33803	30	0	7850.7	0.214	+			14310	GSYNKVFLAK	10	77	376.21310764188115	1125.6174935258434	3	376.2132873535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSYNKVFLAK_	ENSG00000099341|ENST00000215071|PSMD8;ENST00000592001.5_1_19:38865430-38871817:+|nuORF	104.42354056486148	0.06456012287859861	2				NaN	NaN	0	NaN	6144	3305	9450
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9452	27.154	NaN	10208	30	0	1267.9	0.106	+			41693	SVSDLAPPR	9	68	471.25583862671	940.49712432022	2	471.25555419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVSDLAPPR_	ENSG00000166295|ENST00000299381|ANAPC16	82.24051045832904	0.08786059719216216	2				NaN	NaN	0	NaN	6145	3305	9450
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9453	27.156	NaN	7442.9	30	0	1217.2	0.106	+			25451	LPQGEKVQAM	10	74	550.7916675779054	1099.5687822226107	2	550.7926635742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LPQGEKVQAM_	ENSG00000135821|ENST00000331872|GLUL;ENST00000475808.5_1_1:182355349-182357923:-|nuORF;ENST00000489818.5_1_1:182354893-182357872:-|nuORF;ENST00000491322.1_1_1:182356257-182357923:-|nuORF	74.1650062923329	0.2432923583094885	2				NaN	NaN	0	NaN	6146	3305	9450
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9454	27.158	NaN	5426.7	30	0	1922.3	0.106				-1	 	0	52	329.1830834004356	656.3516138676712	2	329.18316650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6147	3305	9450
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9455	27.16	NaN	11105	30	0	3659.4	0.106			+	-1	HTLCKKSAP	9	66	521.2776894740608	1040.5408260149215	2	521.278076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_HTLC(Carbamidomethyl (C))KKSAP_	REV__ENSG00000112701|ENST00000447266|SENP6;REV__nc|ENSG00000112701|Q9GZR1-2|SENP6;REV__SENP6|p.F580Lfs*72|2|0.17|ENSG00000112701|chr6:75677142-75677142|T/-|frameshift_variant;REV__SENP6|p.G1004Efs*11|4|0.34|ENSG00000112701|chr6:75713700-75713700|A/-|frameshift_variant;REV__SENP6|p.I864*|1|0.21|ENSG00000112701|chr6:75702940-75702940|A/-|frameshift_variant	39.252832667884924	0.4290233611298554	2				NaN	NaN	0	NaN	6148	3305	9450
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9456	27.162	NaN	52363	30	0	26038	0.037	+			2795	ARRSPWPLH	9	67	373.8766038975821	1118.6079822929462	3	373.87664794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ARRSPWPLH_	GGTLC1|p.G130Afs*22|1|0.4|ENSG00000149435|chr20:23985890-23985890|C/-|frameshift_variant;GGTLC1|p.S94Hfs*58|1|0.35|ENSG00000149435|chr20:23986101-23986101|G/-|frameshift_variant	50.0245360154114	0.3026755932229825	2				NaN	NaN	0	NaN	6149	3305	9450
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9457	27.162	NaN	7938.6	30	0	2426.1	0.143			+	-1	SEGILCRRKS	10	56	402.55142859517014	1204.6324563857104	3	402.5519714355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_SEGILC(Carbamidomethyl (C))RRKS_	REV__nc|ENSG00000101955|P78539-2|SRPX	32.75053402867276	0.6123771875927935	2				NaN	NaN	0	NaN	6150	3305	9450
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9469	27.19	NaN	56912	30	0	5861.1	0.214				-1	 	0	94	472.77385208457315	943.5331512359463	2	472.7740173339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6159	3308	9468
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9470	27.193	NaN	26002	30	0	6049	0.106				-1	 	0	84	563.8157329626962	1125.6169129921923	2	563.816650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6160	3308	9468
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9471	27.195	NaN	15732	30	0	2856.6	0.106			+	30431	PYKFIPSLH	9	83	367.8731942337718	NaN	0	367.8731994628906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PYKFIPSLH_	REV__ENST00000296785.7_1_5:72858732-72861025:-|nuORF	42.86426827375447	0.2558691296974908	2				NaN	NaN	0	NaN	6161	3308	9468
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9472	27.197	NaN	12779	30	0	4619.5	0.106	+			14151	GSMTVVTVK	9	64	461.2564533221783	920.4983537111566	2	461.2569274902344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GSMTVVTVK_	ENSG00000001461|ENST00000374399|NIPAL3;nc|ENSG00000001461|Q6P499-2|NIPAL3	96.0336014099291	0.047854655524928534	2				NaN	NaN	0	NaN	6162	3308	9468
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9473	27.199	NaN	3867.4	30	0	465.29	0.106	+			231	AAMEPLTAR	9	63	480.2519749480505	958.489396962901	2	480.2524108886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AAMEPLTAR_	nc|ENSG00000182872|P0DW28|RBM10	65.46538089061403	0.16805504838372562	2				NaN	NaN	0	NaN	6163	3308	9468
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9474	27.201	NaN	5759.4	30	0	852.27	0.034	+			12539	GEGDPRPEL	9	72	485.23669208844456	968.4588312436891	2	485.2358093261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GEGDPRPEL_	ENSG00000110237|ENST00000263674|ARHGEF17	58.22992032128504	0.22837015374068087	2				NaN	NaN	0	NaN	6164	3308	9468
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9475	27.201	NaN	29298	30	0	16874	0.144				-1	 	0	58	359.2130922828943	1074.617447448883	3	359.2131652832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6165	3308	9468
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9488	27.231	NaN	15795	30	0	8392.4	0.215	+			32539	QVSPRITFK	9	67	538.3150728155513	1074.6155926979025	2	538.3170166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QVSPRITFK_	ENSG00000151229|ENST00000280871|SLC2A13;ENST00000465517.1_1_12:40223765-40265636:-|nuORF;SLC2A13|p.T491Qfs*41|1|0.08|ENSG00000151229|chr12:39764833-39764833|T/-|frameshift_variant	115.23196543181992	0.024086211614104236	2				NaN	NaN	0	NaN	6175	3311	9487
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9489	27.234	NaN	9149.6	30	0	634.02	0.106			+	25154	LLSTASRTF	9	77	498.2792227328025	994.543892532405	2	498.2796936035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LLSTASRTF_	REV__ENST00000259883.3_1_6:28249363-28249588:+|nuORF	66.42927471994793	0.16001998865088202	2				NaN	NaN	0	NaN	6176	3311	9487
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9490	27.236	NaN	7932.5	30	0	3356.5	0.106	+			25918	LSGRQSPSFK	10	61	369.5362695534475	1105.5869792605424	3	369.5365295410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSGRQSPSFK_	ENSG00000100796|ENST00000554943|PPP4R3A;ENST00000557382.1_1_14:91925105-91927973:-|nuORF;nc|ENSG00000100796|Q6IN85-2|PPP4R3A;nc|ENSG00000100796|Q6IN85-4|PPP4R3A	35.61828744233558	0.588957954432594	2				NaN	NaN	0	NaN	6177	3311	9487
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9491	27.238	NaN	24622	30	0	3379.1	0.106			+	49312	VVRHYMPKL	9	68	381.55471676929466	1141.642320908084	3	381.55474853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVRHYMPKL_	REV__ENSG00000137273|ENST00000645481|FOXF2	49.44154591367651	0.3095138337212152	2				NaN	NaN	0	NaN	6178	3311	9487
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9492	27.24	NaN	5439.8	30	0	622.12	0.106			+	34973	SAAPIRSAL	9	58	443.26066319746815	884.5067734617363	2	443.2611389160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SAAPIRSAL_	REV__ENSG00000167978|ENST00000301740|SRRM2;REV__SRRM2|p.P2670Lfs*13|1|0.08|ENSG00000167978|chr16:2769268-2769268|C/-|frameshift_variant	44.377184641726394	0.36891676396732553	2				NaN	NaN	0	NaN	6179	3311	9487
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9493	27.242	NaN	9162.8	30	0	1534.7	0.035	+			22235	KSYFSGLSK	9	76	508.7739303124293	1015.5333076916586	2	508.7744445800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KSYFSGLSK_	ENSG00000023330|ENST00000484952|ALAS1	63.42647028704847	0.1850514934184437	2				NaN	NaN	0	NaN	6180	3311	9487
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9494	27.242	NaN	5680.1	30	0	707.77	0.138				-1	 	0	62	451.2238441293422	900.4331353254844	2	451.2240295410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6181	3311	9487
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9509	27.276	NaN	13126	30	0	1630.2	0.214			+	24486	LGGTAGAVVL	10	68	429.25776057482216	856.5009682164443	2	429.2579040527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LGGTAGAVVL_	REV__FCRL4|p.A389V|1|0.38|ENSG00000163518|chr1:157581614-157581614|G/A|missense_variant	82.30502934623384	0.17678907142465278	2				NaN	NaN	0	NaN	6193	3314	9508
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9510	27.279	NaN	25094	30	0	10145	0.106	+			35058	SAETVKSRAPG	11	78	368.19975460304414	1101.5774344093325	3	368.1998596191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAETVKSRAPG_	ENST00000586942.5_1_17:74553872-74554508:+|nuORF	19.1035232394073	0.7810393085260824	2				NaN	NaN	0	NaN	6194	3314	9508
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9511	27.281	NaN	4343.7	30	0	2342.2	0.106				-1	 	0	49	351.19619519801984	700.3778374628397	2	351.1962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6195	3314	9508
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9512	27.283	NaN	5811.7	30	0	882.3	0.106	+			50742	YEKGGILKV	9	74	503.8002036243765	NaN	0	503.80029296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YEKGGILKV_	ENSG00000187097|ENST00000334696|ENTPD5	56.43379154798735	0.16452882468284893	2				NaN	NaN	0	NaN	6196	3314	9508
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9513	27.285	NaN	4503.3	30	0	512.62	0.106	+			752	AEEAMKAL	8	62	431.7200955286181	861.4256381240363	2	431.720458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEEAMKAL_	ENSG00000160710|ENST00000368474|ADAR;nc|ENSG00000160710|P55265-2|ADAR;nc|ENSG00000160710|P55265-3|ADAR;nc|ENSG00000160710|P55265-4|ADAR;nc|ENSG00000160710|P55265-5|ADAR	96.19043198914106	0.25873003980794995	2				NaN	NaN	0	NaN	6197	3314	9508
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9514	27.287	NaN	3234.7	30	0	478.16	0.034	+			35575	SAYGGDQNY	9	54	487.69600886991486	NaN	0	487.69598388671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SAYGGDQNY_	ENSG00000152795|ENST00000295470|HNRNPDL;nc|ENSG00000152795|O14979-2|HNRNPDL	69.6276240434122	0.10825701912424071	2				NaN	NaN	0	NaN	6198	3314	9508
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9515	27.287	NaN	4055.2	30	0	780.29	0.141	+			31729	QPAENVNQY	9	66	531.7456794277834	1061.4768059223668	2	531.7461547851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QPAENVNQY_	ENSG00000130985|ENST00000335972|UBA1;nc|ENSG00000130985|P22314-2|UBA1	76.7741389293348	0.11149722112137898	2				NaN	NaN	0	NaN	6199	3314	9508
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9527	27.315	NaN	14980	30	0	4359.6	0.214	+			1943	AISSTVLGK	9	71	438.26316677115005	874.5117806091001	2	438.2633972167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AISSTVLGK_	ENSG00000105976|ENST00000397752|MET;nc|ENSG00000105976|P08581-2|MET	107.00750918261382	0.032051501805654005	2				NaN	NaN	0	NaN	6208	3317	9526
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9528	27.318	NaN	12554	30	0	2232.8	0.106			+	1579	AGILCMLILI	10	78	538.3150728155513	1074.6155926979025	2	537.8119506835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_AGILCM(Oxidation (M))LILI_	REV__ENSG00000118322|ENST00000327245|ATP10B;REV__ENST00000521033.5_1_5:160061154-160212677:-|nuORF;REV__nc|ENSG00000118322|O94823-2|ATP10B;REV__nc|ENSG00000118322|O94823-3|ATP10B	65.89745868150666	0.31220354485832413	2				NaN	NaN	0	NaN	6209	3317	9526
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9529	27.32	NaN	6406.8	30	0	1000.3	0.106	+			28781	NPENSELKY	9	65	547.2612304526286	1092.5079079720572	2	547.26220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NPENSELKY_	ENSG00000141448|ENST00000269216|GATA6;nc|ENSG00000141448|Q92908-2|GATA6	145.15565482312357	0.00806134135205793	2				NaN	NaN	0	NaN	6210	3317	9526
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9530	27.322	NaN	3735.1	30	0	422.48	0.106	+			31584	QLRTSFLK	8	68	496.79770616705724	991.5808594009145	2	496.7978820800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QLRTSFLK_	ENSG00000172803|ENST00000308342|SNX32	68.78682469695295	0.41700713582915416	2				NaN	NaN	0	NaN	6211	3317	9526
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9531	27.324	NaN	5008.1	30	0	1013.9	0.106				-1	 	0	68	493.77887830590765	985.5432036786153	2	493.779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6212	3317	9526
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9532	27.326	NaN	8193.9	30	0	1927	0.039	+			4819	ATNTVYVFAKK	11	58	414.5669268473294	1240.6789511421882	3	414.5675354003906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATNTVYVFAKK_	ENSG00000047315|ENST00000314595|POLR2B;POLR2B|p.A362Pfs*21|1|0.34|ENSG00000047315|chr4:57005423-57005423|A/-|frameshift_variant;POLR2B|p.N1030Sfs*23|1|0.07|ENSG00000047315|chr4:57025384-57025385|-/CT|frameshift_variant;POLR2B|p.P303Tfs*5|1|0.16|ENSG00000047315|chr4:57005248-57005249|-/A|frameshift_variant	38.714083909724	0.5755383074156426	2				NaN	NaN	0	NaN	6213	3317	9526
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9533	27.326	NaN	3818.8	30	0	384.64	0.139			+	13426	GLGSGLKER	9	62	458.76282006601974	NaN	0	458.7630920410156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GLGSGLKER_	REV__PACSIN1|p.V390Cfs*97|1|0.35|ENSG00000124507|chr6:34531730-34531730|G/-|frameshift_variant;REV__PACSIN1|p.V390Gfs*97|1|0.31|ENSG00000124507|chr6:34531731-34531731|T/-|frameshift_variant	42.396135135203025	0.2590952873412954	2				NaN	NaN	0	NaN	6214	3317	9526
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9548	27.36	NaN	13429	30	0	2624.6	0.214				-1	 	0	68	429.27587648174574	856.5372000302915	2	429.2763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6226	3320	9547
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9549	27.363	NaN	7340.9	30	0	1007.6	0.106			+	25794	LSASTTEGRK	10	67	525.2840616753418	1048.5535704174836	2	525.2857666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSASTTEGRK_	REV__ENSG00000146411|ENST00000275230|SLC2A12	60.11826168202944	0.36476464221954025	2				NaN	NaN	0	NaN	6227	3320	9547
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9550	27.365	NaN	8566.5	30	0	1414.8	0.106	+			38516	SSCGLPLGK	9	67	459.7385740180994	917.4625951029989	2	459.7393493652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SSC(Carbamidomethyl (C))GLPLGK_	ENSG00000064042|ENST00000503057|LIMCH1;nc|ENSG00000064042|Q9UPQ0-10|LIMCH1;nc|ENSG00000064042|Q9UPQ0-2|LIMCH1;nc|ENSG00000064042|Q9UPQ0-3|LIMCH1;nc|ENSG00000064042|Q9UPQ0-4|LIMCH1;nc|ENSG00000064042|Q9UPQ0-5|LIMCH1;nc|ENSG00000064042|Q9UPQ0-6|LIMCH1;nc|ENSG00000064042|Q9UPQ0-8|LIMCH1;nc|ENSG00000064042|Q9UPQ0-9|LIMCH1;nc|ENSG00000064042|Q9UPQ0|LIMCH1	90.36981228632155	0.0638227155548745	2				NaN	NaN	0	NaN	6228	3320	9547
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9551	27.367	NaN	5058.7	30	0	865.19	0.106			+	-1	NNMIAMSR	8	61	476.72046762600803	951.4263823188161	2	476.720947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_NNM(Oxidation (M))IAMSR_	REV__ENSG00000244474|ENST00000373409|UGT1A4;REV__nc|ENSG00000244474|P22310-2|UGT1A4;REV__UGT1A4|p.W173Gfs*8|1|0.37|ENSG00000244474|chr2:233719331-233719331|T/-|frameshift_variant;REV__UGT1A4|p.W173Lfs*7|1|0.4|ENSG00000244474|chr2:233719330-233719331|-/T|frameshift_variant	40.77816245573522	0.6514838689002179	2				NaN	NaN	0	NaN	6229	3320	9547
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9552	27.369	NaN	4373.3	30	0	1022.3	0.106	+			16306	HEHQVMLM	8	65	512.7384012208868	1023.4622495085736	2	512.7390747070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HEHQVMLM_	ENSG00000147140|ENST00000276079|NONO;ENST00000471419.6_1_X:70511819-70517312:+|nuORF;ENST00000473525.1_1_X:70516758-70517827:+|nuORF;nc|ENSG00000147140|Q15233-2|NONO	44.116797842482775	0.6307669463330267	2				NaN	NaN	0	NaN	6230	3320	9547
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9553	27.371	NaN	4320.5	30	0	562.18	0.035	+			20719	KGSQKLVATI	10	70	522.8235457969986	1043.632538660797	2	522.8243408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KGSQKLVATI_	tr|U7T4Y1|U7T4Y1_FUSNUOutermembraneproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00235PE=4SV=1	31.529811441608018	0.6223461015008678	2				NaN	NaN	0	NaN	6231	3320	9547
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9554	27.371	NaN	5935.3	30	0	976.62	0.14			+	38010	SPLLHTVGAI	10	68	504.29794057835625	1006.5813282235125	2	504.2987365722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SPLLHTVGAI_	REV__CPEB2|p.C544Lfs*12|1|0.1|ENSG00000137449|chr4:15066233-15066234|-/T|frameshift_variant;REV__CPEB2|p.C544Vfs*31|5|0.34|ENSG00000137449|chr4:15066234-15066234|T/-|frameshift_variant;REV__ENSG00000137449|ENST00000538197|CPEB2;REV__nc|ENSG00000137449|Q7Z5Q1-8|CPEB2	58.78195531508484	0.37691818691852547	2				NaN	NaN	0	NaN	6232	3320	9547
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9567	27.4	NaN	32716	30	0	15428	0.214	+			15627	GVLDRMMKK	9	65	359.8679146506043	1076.581914552013	3	359.8683776855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVLDRMMKK_	ENSG00000163191|ENST00000271638|S100A11;ENST00000478109.1_1_1:152005140-152020324:-|nuORF	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	6242	3323	9566
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9568	27.404	NaN	9190.6	30	0	1428.3	0.106	+			50850	YEVKSENL	8	74	491.24731120748163	980.4800694817633	2	491.2480163574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YEVKSENL_	ENSG00000132383|ENST00000254719|RPA1	95.81516180277367	0.2598660847282228	2				NaN	NaN	0	NaN	6243	3323	9566
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9569	27.406	NaN	4288.5	30	0	869.66	0.106	+			23380	LAADCAHEL	9	63	500.23142777908555	998.4483026249711	2	500.2319030761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LAADC(Carbamidomethyl (C))AHEL_	ENSG00000157379|ENST00000288111|DHRS1;ENST00000558340.1_1_14:24760067-24761569:-|nuORF;ENST00000561137.5_1_14:24760413-24761527:-|nuORF;ENST00000561273.5_1_14:24760714-24761569:-|nuORF	120.62098272573253	0.020823834273767324	2				NaN	NaN	0	NaN	6244	3323	9566
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9570	27.408	NaN	14787	30	0	3265.8	0.106	+			1828	AIIENMSTK	9	75	503.76506804644237	1005.5155831596848	2	503.7655334472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AIIENMSTK_	ENSG00000116729|ENST00000262348|WLS;nc|ENSG00000116729|Q5T9L3-2|WLS;nc|ENSG00000116729|Q5T9L3-3|WLS	81.52500206392136	0.09095445986635249	2				NaN	NaN	0	NaN	6245	3323	9566
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9571	27.41	NaN	6579.9	30	0	1665.2	0.106	+			49432	VVVGAVGVGK	10	64	442.7813322736104	883.5481116140209	2	442.7816467285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVVGAVGVGK_	KRAS|p.G12V|32|0.43|ENSG00000133703|chr12:25245350-25245350|C/A|missense_variant;NRAS|p.G12V|1|0.52|ENSG00000213281|chr1:114716126-114716126|C/A|missense_variant	111.64827973302667	0.04310463411224686	2				NaN	NaN	0	NaN	6246	3323	9566
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9572	27.411	NaN	7863.1	30	0	2563.3	0.038	+			21751	KQPGLETNILK	11	75	620.8669308190332	1239.7193087048663	2	620.86669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KQPGLETNILK_	ENST00000502562.5_1_4:145954424-146019337:-|nuORF	49.46582953369473	0.42842160004107194	2				NaN	NaN	0	NaN	6247	3323	9566
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9573	27.412	NaN	4717.1	30	0	572.86	0.14				-1	 	0	62	401.21583706574756	800.4171211982951	2	401.2161865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6248	3323	9566
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9586	27.441	NaN	29599	30	0	5443.6	0.214	+			34749	RYASINAHL	9	88	522.7824025686671	1043.550252204134	2	522.7830810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RYASINAHL_	CSNK1A1L|p.Q231Tfs*4|1|0.27|ENSG00000180138|chr13:37104566-37104567|-/T|frameshift_variant;ENSG00000113712|ENST00000377843|CSNK1A1;ENSG00000180138|ENST00000379800|CSNK1A1L;ENST00000606299.1_1_5:148886668-148892751:-|nuORF;nc|ENSG00000113712|P48729-2|CSNK1A1;nc|ENSG00000113712|P48729-3|CSNK1A1	67.49366992349736	0.1516260258713357	2				NaN	NaN	0	NaN	6258	3326	9585
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9587	27.445	NaN	42366	30	0	8269.4	0.106				-1	 	0	87	370.2203393529592	1107.6391886590775	3	370.2206115722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6259	3326	9585
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9588	27.447	NaN	9350.5	30	0	1133.2	0.106				-1	 	0	63	422.74745900249803	843.4803650717961	2	422.7478332519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6260	3326	9585
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9589	27.449	NaN	8998.6	30	0	2099.7	0.106				-1	 	0	72	445.252639898023	888.490726862846	2	445.25286865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6261	3326	9585
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9590	27.45	NaN	8556.5	30	0	1953.3	0.106				-1	 	0	75	498.2973993263129	994.5802457194259	2	498.2975769042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6262	3326	9585
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9591	27.452	NaN	6367.1	30	0	1955.5	0.034	+			23934	LDPTVKCPT	9	68	487.25451253504883	972.4944721368977	2	487.25469970703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LDPTVKCPT_	ENSG00000188906|ENST00000298910|LRRK2;LRRK2|p.K1328Rfs*8|1|0.21|ENSG00000188906|chr12:40308485-40308485|A/-|frameshift_variant;LRRK2|p.N2261Kfs*9|1|0.28|ENSG00000188906|chr12:40356119-40356120|-/A|frameshift_variant;LRRK2|p.R1639Gfs*15|1|0.59|ENSG00000188906|chr12:40320068-40320068|A/-|frameshift_variant;LRRK2|p.R1639Kfs*13|1|0.36|ENSG00000188906|chr12:40320067-40320068|-/A|frameshift_variant	40.77816245573522	0.41113185337114944	2				NaN	NaN	0	NaN	6263	3326	9585
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9592	27.453	NaN	4926.9	30	0	788.19	0.139	+			1150	AEMTTRMV	8	70	469.7248245562829	937.4350961793658	2	469.7249755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AEMTTRMV_	ENSG00000205220|ENST00000358514|PSMB10	71.87747018426188	0.391254423828572	2				NaN	NaN	0	NaN	6264	3326	9585
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9605	27.482	NaN	59931	30	0	28284	0.214	+			48692	VTTGSEGLLK	10	81	502.78431594118894	1003.5540789491779	2	502.78472900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTTGSEGLLK_	ENSG00000134987|ENST00000513710|WDR36;ENST00000505303.5_1_5:110428043-110447004:+|nuORF;nc|ENSG00000134987|Q8NI36|WDR36	146.78539889680295	0.009066311176022962	2				NaN	NaN	0	NaN	6274	3329	9604
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9606	27.486	NaN	34828	30	0	6206.4	0.106	+			34352	RTQGLMIMK	9	83	539.2981740102798	1076.5817950873595	2	539.2993774414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RTQGLMIMK_	ENSG00000137275|ENST00000259808|RIPK1;nc|ENSG00000137275|Q13546-2|RIPK1	109.82975700811294	0.02917171107062681	2				NaN	NaN	0	NaN	6275	3329	9604
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9607	27.488	NaN	12240	30	0	1295.5	0.106	+			6614	AYQKVVAGV	9	77	467.771200880099	933.527848826998	2	467.7713317871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AYQKVVAGV_	ENSG00000223609|ENST00000650601|HBD;ENSG00000244734|ENST00000335295|HBB	119.55681237560556	0.021468056596162587	2				NaN	NaN	0	NaN	6276	3329	9604
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9608	27.489	NaN	8043.1	30	0	2184.8	0.106				-1	 	0	54	413.914548332046	1238.721815596338	3	413.91497802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6277	3329	9604
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9609	27.491	NaN	7642.4	30	0	1002.8	0.106	+			44486	TSSDVIEMK	9	72	505.2470140112658	1008.4794750893316	2	505.2474365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TSSDVIEMK_	ENSG00000039123|ENST00000230640|MTREX	104.01359247289065	0.03510646158778409	2				NaN	NaN	0	NaN	6278	3329	9604
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9610	27.493	NaN	4581	30	0	276.93	0.034	+			13502	GLNEINHI	8	69	455.2424481915709	908.4703434499418	2	455.2427673339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GLNEINHI_	ENSG00000279000|ENST00000641238|OR10A6	44.116797842482775	0.6307669463330267	2				NaN	NaN	0	NaN	6279	3329	9604
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9611	27.494	NaN	5773.4	30	0	679.98	0.143	+			26455	LTHQFLVDL	9	47	362.53793403987254	1084.5919727198177	3	362.5386657714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LTHQFLVDL_	ENST00000530758.1_1_3:10168359-10168521:+|nuORF	27.882242232435846	0.5426732730940306	2				NaN	NaN	0	NaN	6280	3329	9604
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9624	27.523	NaN	31697	30	0	3663.6	0.214	+			23249	KYINTDAKF	9	94	550.2922423718674	1098.5699318105346	2	550.293212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KYINTDAKF_	ENSG00000100991|ENST00000252015|TRPC4AP;nc|ENSG00000100991|Q8TEL6-3|TRPC4AP	177.3047273071476	0.0015666121956477066	2				NaN	NaN	0	NaN	6290	3332	9623
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9625	27.526	NaN	33383	30	0	16785	0.106	+			48684	VTTGGMVLK	9	69	453.25927505364655	904.5039971740931	2	453.2596435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTTGGMVLK_	ENSG00000173369|ENST00000509305|C1QB;nc|ENSG00000173369|P02746|C1QB	107.00750918261382	0.032051501805654005	2				NaN	NaN	0	NaN	6291	3332	9623
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9626	27.528	NaN	14183	30	0	2704.2	0.106	+			38134	SQADGSFLK	9	73	476.74010992649534	NaN	0	476.7402038574219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SQADGSFLK_	ENSG00000152818|ENST00000367545|UTRN;nc|ENSG00000152818|P46939-2|UTRN;UTRN|p.G3160*|1|0.03|ENSG00000152818|chr6:144821001-144821002|AG/-|frameshift_variant;UTRN|p.R3003Pfs*5|1|0.27|ENSG00000152818|chr6:144793915-144793916|-/C|frameshift_variant;UTRN|p.T2422Hfs*35|1|0.47|ENSG00000152818|chr6:144557282-144557282|A/-|frameshift_variant	66.96192283764107	0.11962625698446946	2				NaN	NaN	0	NaN	6292	3332	9623
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9627	27.53	NaN	10336	30	0	1011.9	0.106	+			18058	IIVIVCVDK	9	82	529.8184260672798	1057.6222992013595	2	529.8194580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_IIVIVC(Carbamidomethyl (C))VDK_	ENSG00000179468|ENST00000350513|OR9A2	44.116797842482775	0.37197099687881774	2				NaN	NaN	0	NaN	6293	3332	9623
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9628	27.532	NaN	9063.1	30	0	720.69	0.106	+			50701	YEEQKNSF	8	82	522.7355429010747	1043.4565328689494	2	522.7393798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YEEQKNSF_	ENSG00000187944|ENST00000342506|C2orf66;nc|nan|Q6UXQ4|C2orf66	75.04331003522576	0.3648751570195447	2				NaN	NaN	0	NaN	6294	3332	9623
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9629	27.534	NaN	3994.3	30	0	1409.1	0.035	+			14392	GTAKVDFLK	9	72	489.7849339798787	977.5553150265574	2	489.7848205566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTAKVDFLK_	ENSG00000133706|ENST00000394434|LARS1	65.46538089061403	0.16805504838372562	2				NaN	NaN	0	NaN	6295	3332	9623
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9630	27.534	NaN	5100.8	30	0	343.68	0.139	+			35187	SAINEVVTR	9	65	494.77443400034497	987.53431506749	2	494.7746887207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SAINEVVTR_	ENSG00000071082|ENST00000264258|RPL31;nc|ENSG00000071082|P62899-2|RPL31;nc|ENSG00000071082|P62899-3|RPL31	65.2775769800794	0.16962058972581526	2				NaN	NaN	0	NaN	6296	3332	9623
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9644	27.566	NaN	26660	30	0	3174.2	0.214	+			15665	GVMRVGLVAK	10	96	515.3150888781986	1028.615624823197	2	515.3156127929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVMRVGLVAK_	ENSG00000129351|ENST00000588657|ILF3;ENST00000587928.5_1_19:10781281-10792148:+|nuORF;nc|ENSG00000129351|Q12906-2|ILF3;nc|ENSG00000129351|Q12906-3|ILF3;nc|ENSG00000129351|Q12906-4|ILF3;nc|ENSG00000129351|Q12906-5|ILF3;nc|ENSG00000129351|Q12906-6|ILF3;nc|ENSG00000129351|Q12906|ILF3	82.7504851949679	0.1731497355276012	2				NaN	NaN	0	NaN	6307	3335	9643
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9645	27.569	NaN	11762	30	0	2844.2	0.106	+			16893	HPIKQVDVL	9	73	524.8104303877554	1047.6063078423108	2	524.8115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HPIKQVDVL_	ENSG00000107960|ENST00000224950|STN1	107.00750918261382	0.032051501805654005	2				NaN	NaN	0	NaN	6308	3335	9643
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9646	27.571	NaN	18122	30	0	3255.1	0.106	+			35996	SEHVKLEQL	9	83	541.795193709404	1081.5758344856079	2	541.796142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEHVKLEQL_	ARHGAP1|p.L237Cfs*135|2|0.38|ENSG00000175220|chr11:46680674-46680674|G/-|frameshift_variant;ARHGAP1|p.L237Rfs*135|1|0.37|ENSG00000175220|chr11:46680673-46680673|A/-|frameshift_variant;ENSG00000175220|ENST00000311956|ARHGAP1	138.06239232086	0.011389075116295402	2				NaN	NaN	0	NaN	6309	3335	9643
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9647	27.573	NaN	12581	30	0	3585.7	0.106			+	29867	PLGALQQGS	9	56	435.7372819904678	869.4600110477356	2	435.7373962402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PLGALQQGS_	REV__ENSG00000188282|ENST00000697321|RUFY4;REV__RUFY4|p.E426Rfs*11|1|0.38|ENSG00000188282|chr2:218076453-218076453|T/-|frameshift_variant	90.77665401227738	0.06267569666681755	2				NaN	NaN	0	NaN	6310	3335	9643
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9648	27.575	NaN	8330.5	30	0	2803.8	0.106	+			18302	IPQNVAPN	8	59	426.73175956878	851.44896620436	2	426.732177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IPQNVAPN_	ENSG00000042832|ENST00000220616|TG;nc|ENSG00000042832|P01266-2|TG;TG|p.E2744Vfs*20|1|0.07|ENSG00000042832|chr8:133134716-133134717|GG/-|frameshift_variant;TG|p.W2685Gfs*26|2|0.22|ENSG00000042832|chr8:133133520-133133520|C/-|frameshift_variant	44.53106598305862	0.628196326904373	2				NaN	NaN	0	NaN	6311	3335	9643
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9649	27.577	NaN	9247.8	30	0	1123.6	0.106			+	6997	CRGQSRKK	8	72	510.2805840942973	1018.5466152553946	2	510.2808532714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_C(Carbamidomethyl (C))RGQSRKK_	REV__ENST00000403821.6_2_12:57691915-57693200:-|nuORF	42.396135135203025	0.6414440140393314	2				NaN	NaN	0	NaN	6312	3335	9643
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9650	27.579	NaN	7582.7	30	0	1078	0.036	+			41269	SVLKEYNLK	9	70	547.3158800527779	1092.6172071723556	2	547.3168334960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVLKEYNLK_	nc|ENSG00000104973|Q71SY5-4|MED25	145.46060221211434	0.007927189773590037	2				NaN	NaN	0	NaN	6313	3335	9643
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9662	27.604	NaN	28077	30	0	4102.5	0.214	+			38808	SSMVFTTSK	9	88	494.2439126108839	986.4732722885678	2	494.2443542480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSMVFTTSK_	ENSG00000112818|ENST00000230588|MEP1A	120.30596017624542	0.02101454110788768	2				NaN	NaN	0	NaN	6322	3338	9661
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9663	27.608	NaN	10831	30	0	6095.9	0.106			+	23462	LAEGRVQL	8	71	443.2609379649223	884.5073229966446	2	443.2611999511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LAEGRVQL_	REV__ENSG00000170324|ENST00000374201|FRMPD2;REV__ENST00000486151.5_1_10:49420141-49482610:-|nuORF;REV__FRMPD2|p.K602Sfs*61|1|0.27|ENSG00000170324|chr10:48201377-48201377|T/-|frameshift_variant;REV__FRMPD2|p.N579Tfs*84|1|0.32|ENSG00000170324|chr10:48206809-48206809|T/-|frameshift_variant;REV__nc|ENSG00000170324|Q68DX3-2|FRMPD2;REV__nc|ENSG00000170324|Q68DX3-3|FRMPD2	53.351449002276354	0.5676011784961348	2				NaN	NaN	0	NaN	6323	3338	9661
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9664	27.61	NaN	5627.5	30	0	719.03	0.106			+	19681	KDPLLSSSM	9	64	489.2518910137208	976.4892290942416	2	489.2521667480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KDPLLSSSM_	REV__ENST00000368811.7_1_1:151955557-151955632:-|nuORF	76.7741389293348	0.11149722112137898	2				NaN	NaN	0	NaN	6324	3338	9661
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9665	27.611	NaN	3550	30	0	330.01	0.106	+			10101	ESLKVLNE	8	74	466.2601482360382	930.5057435388765	2	466.2587585449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ESLKVLNE_	AZI2|p.R228Pfs*7|1|0.03|ENSG00000163512|chr3:28326916-28326917|-/GCTTTGG|frameshift_variant;ENSG00000163512|ENST00000479665|AZI2;ENST00000463512.5_1_3:28368296-28390095:-|nuORF;nc|ENSG00000163512|Q9H6S1-3|AZI2;nc|ENSG00000163512|Q9H6S1-4|AZI2;nc|ENSG00000163512|Q9H6S1-5|AZI2	56.72105179125745	0.5342425954139568	2				NaN	NaN	0	NaN	6325	3338	9661
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9666	27.613	NaN	2978.3	30	0	231.84	0.106			+	20965	KKEGNQFYQ	9	71	571.2849891136083	1140.5554252940165	2	571.2861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KKEGNQFYQ_	REV__ENSG00000089053|ENST00000261819|ANAPC5;REV__ENST00000534976.5_1_12:121766230-121783868:-|nuORF;REV__ENST00000541652.5_1_12:121773337-121785669:-|nuORF;REV__nc|ENSG00000089053|Q9UJX4-2|ANAPC5;REV__nc|ENSG00000089053|Q9UJX4-3|ANAPC5	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	6326	3338	9661
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9667	27.615	NaN	4628.1	30	0	1803.8	0.106	+			31287	QIDSPLSGK	9	64	472.7579608390468	943.5013687448936	2	472.75616455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QIDSPLSGK_	ENSG00000162692|ENST00000294728|VCAM1;nc|ENSG00000162692|P19320-3|VCAM1;VCAM1|p.L453Ffs*23|1|0.35|ENSG00000162692|chr1:100731346-100731347|-/T|frameshift_variant;VCAM1|p.V398Efs*10|1|0.1|ENSG00000162692|chr1:100729370-100729371|-/AGAAAGA|frameshift_variant	41.42661286455405	0.403525789677298	2				NaN	NaN	0	NaN	6327	3338	9661
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9668	27.617	NaN	3289.6	30	0	295.35	0.034	+			17549	IDVCPGPIR	9	62	485.26476704289865	968.5149811525973	2	485.2657165527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IDVCPGPIR_	ENSG00000272636|ENST00000613549|DOC2B	49.44154591367651	0.3095138337212152	2				NaN	NaN	0	NaN	6328	3338	9661
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9682	27.647	NaN	45097	30	0	31865	0.214				-1	 	0	75	460.25285559637996	918.4911582595599	2	460.2535400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6339	3341	9681
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9683	27.65	NaN	8610.1	30	0	1510.7	0.106	+			22386	KTIGLMRMQ	9	76	539.2981740102798	1076.5817950873595	2	539.7992553710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTIGLMRMQ_	ENSG00000156170|ENST00000396124|NDUFAF6;ENST00000518608.5_1_8:96037415-96056782:+|nuORF;ENST00000520632.5_1_8:96044323-96048661:+|nuORF;nc|ENSG00000156170|Q330K2-2|NDUFAF6	32.75053402867276	0.49717649897795874	2				NaN	NaN	0	NaN	6340	3341	9681
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9684	27.652	NaN	4898.1	30	0	367.37	0.106	+			45695	VAAGSYQRF	9	66	499.75629629310663	997.4980396530133	2	499.7565002441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VAAGSYQRF_	ENSG00000160783|ENST00000368277|PMF1;nc|ENSG00000160783|Q6P1K2-3|PMF1;nc|ENSG00000160783|Q6P1K2-4|PMF1;nc|ENSG00000160783|Q6P1K2-5|PMF1;nc|ENSG00000160783|Q6P1K2-6|PMF1	127.46168284122857	0.016682644177004526	2				NaN	NaN	0	NaN	6341	3341	9681
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9685	27.654	NaN	6796.5	30	0	2139.4	0.106	+			40382	STTVIGCVK	9	58	454.2486400777086	906.4827272222172	2	454.24932861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STTVIGCVK_	ENSG00000189339|ENST00000617444|SLC35E2B;ENST00000481276.1_1_1:1602946-1608282:-|nuORF;nc|ENSG00000215790|P0CK97-2|SLC35E2A;nc|ENSG00000215790|P0CK97|SLC35E2A	66.42927471994793	0.16001998865088202	2				NaN	NaN	0	NaN	6342	3341	9681
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9686	27.656	NaN	7985.7	30	0	666.23	0.106	+			46299	VEKEGIHVL	9	70	512.2951526786603	1022.5757524241207	2	512.2959594726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VEKEGIHVL_	chr1:31911841-31915895|139|19.5|0.0|20.89|-|0|None,PTP4A2|1;ENSG00000112245|ENST00000626021|PTP4A1;ENSG00000184007|ENST00000647444|PTP4A2;ENST00000484483.1_1_1:32381486-32384666:-|nuORF;nc|ENSG00000184007|Q12974-2|PTP4A2;nc|ENSG00000184007|Q12974-4|PTP4A2	120.8684288430529	0.02067403653475984	2				NaN	NaN	0	NaN	6343	3341	9681
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9687	27.658	NaN	4561.3	30	0	577.4	0.034	+			8177	EAAPHDIGY	9	73	486.72417596254206	971.4337989918841	2	486.72454833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EAAPHDIGY_	ENSG00000124357|ENST00000244204|NAGK;ENST00000472519.5_1_2:71300598-71303116:+|nuORF;nc|ENSG00000124357|Q9UJ70-2|NAGK	38.80614096846853	0.43426287593479557	2				NaN	NaN	0	NaN	6344	3341	9681
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9688	27.658	NaN	1991.1	30	0	690.9	0.143	+			49263	VVPGSSGV	8	41	351.19597811724464	NaN	0	351.1959228515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VVPGSSGV_	ENSG00000130699|ENST00000252996|TAF4;ENST00000436129.2_1_20:60551226-60583162:-|nuORF;ENST00000608458.1_1_20:60551226-60554091:-|nuORF	29.841539824830324	1.7418937515398478	2				NaN	NaN	0	NaN	6345	3341	9681
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9700	27.686	NaN	9048.8	30	0	2466.6	0.214			+	29378	PALHATAP	8	57	389.2160958799987	776.4176388267974	2	389.2164001464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PALHATAP_	REV__ENST00000545910.1_1_19:45641863-45643897:+|nuORF	44.53106598305862	0.628196326904373	2				NaN	NaN	0	NaN	6354	3344	9699
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9701	27.689	NaN	14823	30	0	2687.1	0.106	+			33385	RIADIFVKK	9	81	363.8972435178942	1088.6699011538826	3	363.89752197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RIADIFVKK_	ENSG00000180263|ENST00000343958|FGD6;ENST00000451107.3_1_12:95475298-95611245:-|nuORF;nc|ENSG00000180263|Q6ZV73-2|FGD6	55.08391021199286	0.2545954270840753	2				NaN	NaN	0	NaN	6355	3344	9699
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9702	27.691	NaN	22022	30	0	4528.7	0.106	+			39746	STITGVMDK	9	83	476.2435806037097	950.4726082742194	2	476.24456787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STITGVMDK_	ENSG00000147872|ENST00000276914|PLIN2;PLIN2|p.V348*|1|0.15|ENSG00000147872|chr9:19116520-19116520|C/-|frameshift_variant	109.43880257439609	0.029570636687953285	2				NaN	NaN	0	NaN	6356	3344	9699
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9703	27.693	NaN	3165.9	30	0	296.76	0.106	+			34219	RTEQTFILK	9	63	568.3269482888746	1134.6393436445492	2	568.327880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RTEQTFILK_	ENSG00000136643|ENST00000366960|RPS6KC1;nc|ENSG00000136643|Q96S38-2|RPS6KC1;RPS6KC1|p.D354N|1|0.26|ENSG00000136643|chr1:213230512-213230512|G/A|missense_variant;RPS6KC1|p.F1056Lfs*9|1|0.05|ENSG00000136643|chr1:213272596-213272596|T/-|frameshift_variant	38.714083909724	0.4353426683796102	2				NaN	NaN	0	NaN	6357	3344	9699
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9704	27.695	NaN	6401.8	30	0	828.63	0.106	+			19793	KEAQRIMTL	9	78	545.3072160314117	1088.5998791296233	2	545.3087158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEAQRIMTL_	ENSG00000160888|ENST00000292433|IER2	70.8162118820467	0.13725933411854815	2				NaN	NaN	0	NaN	6358	3344	9699
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9705	27.697	NaN	10993	30	0	883.83	0.106			+	9567	ELGGTPDLR	9	80	479.253565971278	956.4925790093561	2	479.2538757324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ELGGTPDLR_	REV__ENST00000229281.5_1_12:7053259-7053325:+|nuORF	40.77816245573522	0.41113185337114944	2				NaN	NaN	0	NaN	6359	3344	9699
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9706	27.698	NaN	9714.7	30	0	3309.1	0.034	+			10844	FASQQGMTA	9	67	470.7130567587824	939.4115605843648	2	470.7132263183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FASQQGMTA_	ENSG00000130176|ENST00000252456|CNN1;nc|ENSG00000130176|P51911-2|CNN1	85.86182877749512	0.07653218437724067	2				NaN	NaN	0	NaN	6360	3344	9699
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9721	27.73	NaN	47789	30	0	6408.4	0.214	+			10653	EYQKVGQSF	9	86	543.2663783363248	1084.5182037394495	2	543.2675170898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EYQKVGQSF_	ENSG00000178996|ENST00000381410|SNX18;nc|ENSG00000178996|Q96RF0-3|SNX18;nc|ENSG00000178996|Q96RF0|SNX18	223.87817336536054	1.204045334314454E-12	2				NaN	NaN	0	NaN	6372	3347	9720
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9722	27.734	NaN	12529	30	0	1820.9	0.106				-1	 	0	78	493.8153782525785	985.616203571957	2	493.81591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6373	3347	9720
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9723	27.736	NaN	8110.1	30	0	1313.9	0.106				-1	 	0	71	417.73155073483997	833.44854853648	2	417.7319030761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6374	3347	9720
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9724	27.737	NaN	8652.9	30	0	1682.5	0.106	+			4150	ATESGMLYH	9	67	504.7258966578005	1007.437240382401	2	504.7264404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATESGMLYH_	ENSG00000108559|ENST00000573584|NUP88;ENST00000574867.5_1_17:5292093-5322970:-|nuORF	133.4690685054315	0.013543987435668854	2				NaN	NaN	0	NaN	6375	3347	9720
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9725	27.739	NaN	6999.1	30	0	566.3	0.106	+			12899	GESEKLVRL	9	68	515.7977777008937	1029.5810024685873	2	515.79833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GESEKLVRL_	ENSG00000102781|ENST00000380615|KATNAL1;ENSG00000186625|ENST00000367411|KATNA1;ENST00000481905.5_1_6:149919348-149924475:-|nuORF;KATNAL1|p.P379Yfs*13|1|0.23|ENSG00000102781|chr13:30227424-30227425|-/TA|frameshift_variant;nc|ENSG00000186625|O75449-2|KATNA1	95.81516180277367	0.04847050768394289	2				NaN	NaN	0	NaN	6376	3347	9720
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9726	27.741	NaN	3563	30	0	352.35	0.106	+			10707	FAAEAQKL	8	59	439.24213179712433	876.4697106610487	2	439.2425537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FAAEAQKL_	ENSG00000196498|ENST00000405201|NCOR2;nc|ENSG00000196498|Q9Y618-4|NCOR2;nc|ENSG00000196498|Q9Y618-5|NCOR2;NCOR2|p.H1302Mfs*12|2|0.25|ENSG00000196498|chr12:124348255-124348255|G/-|frameshift_variant;NCOR2|p.L1405*|1|0.44|ENSG00000196498|chr12:124346710-124346710|G/-|frameshift_variant;NCOR2|p.P1047Lfs*16|1|0.43|ENSG00000196498|chr12:124356743-124356743|G/-|frameshift_variant;NCOR2|p.R1060Vfs*3|1|0.23|ENSG00000196498|chr12:124356705-124356705|G/-|frameshift_variant	79.45101966838831	0.3281480470254892	2				NaN	NaN	0	NaN	6377	3347	9720
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9727	27.743	NaN	4192.4	30	0	783.6	0.034	+			46854	VIHTEKPL	8	54	468.7786691127462	935.5427852922924	2	468.77935791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VIHTEKPL_	ENSG00000155903|ENST00000286364|RASA2;nc|ENSG00000155903|Q15283|RASA2	37.028477286268924	0.6747514403204248	2				NaN	NaN	0	NaN	6378	3347	9720
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9741	27.773	NaN	10832	30	0	3254.9	0.214	+			4479	ATITDKELLK	10	63	377.89190986279397	1130.653900188582	3	377.8922119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATITDKELLK_	ENSG00000131503|ENST00000360839|ANKHD1;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	35.495647763667336	0.589959479604089	2				NaN	NaN	0	NaN	6389	3350	9740
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9742	27.776	NaN	5695.6	30	0	352.06	0.106	+			13762	GQFKDIITK	9	75	525.3027685523891	1048.5909841715782	2	525.3038940429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GQFKDIITK_	ENSG00000070371|ENST00000427926|CLTCL1;ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000070371|P53675-2|CLTCL1;nc|ENSG00000141367|Q00610-2|CLTC	99.01295224348159	0.040209060045561164	2				NaN	NaN	0	NaN	6390	3350	9740
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9743	27.778	NaN	6637.5	30	0	791.63	0.106	+			50425	YAAYHVFF	8	74	509.24621488063644	1016.4778768280729	2	509.2473449707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YAAYHVFF_	ENSG00000118600|ENST00000261234|RXYLT1;ENST00000536219.5_1_12:64173626-64178865:+|nuORF	33.49298260027079	0.7007254697536482	2				NaN	NaN	0	NaN	6391	3350	9740
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9744	27.78	NaN	3804.3	30	0	679	0.106			+	38976	SSSAIYLEQ	9	66	499.24531592101044	996.4760789088209	2	499.245361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSSAIYLEQ_	REV__ENSG00000198932|ENST00000537097|GPRASP1;REV__GPRASP1|p.I1166Ffs*16|1|0.29|ENSG00000198932|chrX:102657404-102657404|A/-|frameshift_variant;REV__GPRASP1|p.L1217Ffs*23|1|0.19|ENSG00000198932|chrX:102657557-102657558|-/T|frameshift_variant	72.87924865735499	0.12833875048249987	2				NaN	NaN	0	NaN	6392	3350	9740
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9745	27.782	NaN	5375.1	30	0	1185.9	0.106			+	35671	SDFKLGSLT	9	66	484.2580043119665	966.501455690733	2	484.2582702636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SDFKLGSLT_	REV__ENSG00000106701|ENST00000481272|FSD1L;REV__FSD1L|p.Y262F|1|0.33|ENSG00000106701|chr9:105506597-105506597|A/T|missense_variant;REV__nc|ENSG00000106701|Q9BXM9-2|FSD1L	58.78195531508484	0.22376836668196862	2				NaN	NaN	0	NaN	6393	3350	9740
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9746	27.784	NaN	3723.6	30	0	1151.9	0.037	+			9028	EGEEGLRAWT	10	53	383.1838356299917	1146.5296774901751	3	383.18426513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EGEEGLRAWT_	ENSG00000149256|ENST00000278550|TENM4	27.047317107675042	0.6589519614906109	2				NaN	NaN	0	NaN	6394	3350	9740
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9747	27.784	NaN	2711.3	30	0	1291.4	0.141	+			37157	SIVKESILK	9	40	339.5496400704649	1015.6270908115946	3	339.5498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SIVKESILK_	ENST00000436367.5_1_6:16658088-16761588:-|nuORF	39.252832667884924	0.4290233611298554	2				NaN	NaN	0	NaN	6395	3350	9740
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9761	27.816	NaN	22828	30	0	2919.5	0.214	+			20236	KELTIGSKL	9	94	494.8051144107092	987.5956758882185	2	494.8055419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KELTIGSKL_	ENSG00000197956|ENST00000368719|S100A6	82.83050618871818	0.08530945204495013	2				NaN	NaN	0	NaN	6406	3353	9760
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9762	27.819	NaN	25205	30	0	7547.2	0.106	+			48921	VVDQTTLMK	9	71	517.7806923242581	1033.546831715316	2	517.7816772460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVDQTTLMK_	ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;TRRAP-ASNS|1|fusion;TRRAP-ASNS|2|fusion;TRRAP|p.A1620Cfs*35|1|0.27|ENSG00000196367|chr7:98949499-98949500|-/G|frameshift_variant;TRRAP|p.I564Hfs*9|1|0.29|ENSG00000196367|chr7:98910389-98910390|-/G|frameshift_variant;TRRAP|p.K3443Sfs*19|1|0.28|ENSG00000196367|chr7:99004246-99004246|A/-|frameshift_variant;TRRAP|p.L291*|1|0.36|ENSG00000196367|chr7:98900691-98900691|T/-|frameshift_variant;TRRAP|p.P1292Lfs*17|1|0.44|ENSG00000196367|chr7:98933258-98933258|C/-|frameshift_variant;TRRAP|p.P1360Afs*14|1|0.05|ENSG00000196367|chr7:98935641-98935642|-/GCAAATAA|frameshift_variant	186.41076107051632	0.0006524797715399015	2				NaN	NaN	0	NaN	6407	3353	9760
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9763	27.821	NaN	17354	30	0	3630.2	0.106				-1	 	0	87	506.2311549310931	1010.4477569289862	2	506.2322998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6408	3353	9760
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9764	27.823	NaN	6053.2	30	0	1063.8	0.106			+	45412	TVVKTVTP	8	60	422.7600114079223	843.5054698826447	2	422.7606201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TVVKTVTP_	REV__DDX46|p.T361Rfs*7|1|0.04|ENSG00000145833|chr5:134782978-134782979|-/AAGATTAACAAAC|frameshift_variant;REV__DDX46|p.T418Qfs*23|1|0.17|ENSG00000145833|chr5:134784448-134784448|A/-|frameshift_variant;REV__ENSG00000145833|ENST00000452510|DDX46;REV__nc|ENSG00000145833|Q7L014|DDX46	69.6276240434122	0.4100012001731381	2				NaN	NaN	0	NaN	6409	3353	9760
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9765	27.825	NaN	5590.7	30	0	716.77	0.106				-1	 	0	51	370.2203393529592	1107.6391886590775	3	370.2204895019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6410	3353	9760
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9766	27.827	NaN	3794.7	30	0	422.87	0.106	+			44089	TPTPGHIM	8	57	427.2147672226695	852.414981512139	2	427.2156677246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TPTPGHIM_	ENSG00000115524|ENST00000335508|SF3B1;ENST00000468925.1_1_2:198272706-198273336:-|nuORF;SF3B1|p.F815Lfs*19|1|0.14|ENSG00000115524|chr2:197401451-197401451|A/-|frameshift_variant	83.28718786952967	0.2977916691876266	2				NaN	NaN	0	NaN	6411	3353	9760
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9767	27.829	NaN	3853.6	30	0	644.45	0.034	+			47728	VSGEPLLAK	9	58	457.27076489452656	912.5269768558531	2	457.27142333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VSGEPLLAK_	ENSG00000204104|ENST00000373327|TRAF3IP1;nc|ENSG00000204104|Q8TDR0-2|TRAF3IP1;TRAF3IP1|p.E258Rfs*5|2|0.24|ENSG00000204104|chr2:238329189-238329189|G/-|frameshift_variant	85.16082228582465	0.07850854922700509	2				NaN	NaN	0	NaN	6412	3353	9760
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9780	27.856	NaN	8423	30	0	716.61	0.214	+			2428	APFEQAGQKY	10	79	569.7795028187162	1137.5444527042323	2	569.780517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_APFEQAGQKY_	ENSG00000177106|ENST00000318562|EPS8L2;ENST00000526909.5_1_11:710402-726978:+|nuORF;ENST00000527832.5_1_11:724661-726978:+|nuORF;ENST00000531393.5_1_11:721935-726978:+|nuORF;EPS8L2|p.V669Gfs*33|1|0.13|ENSG00000177106|chr11:726690-726690|T/-|frameshift_variant;nc|ENSG00000177106|Q9H6S3-2|EPS8L2;nc|ENSG00000177106|Q9H6S3-3|EPS8L2	141.52041321563706	0.010348713679906373	2				NaN	NaN	0	NaN	6422	3356	9779
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9781	27.859	NaN	6873.4	30	0	1281.1	0.106	+			25521	LPTDSHASL	9	63	470.74002484861694	939.4654967640339	2	470.7402648925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LPTDSHASL_	ENSG00000064419|ENST00000265388|TNPO3;nc|ENSG00000064419|Q9Y5L0-1|TNPO3;nc|ENSG00000064419|Q9Y5L0-3|TNPO3;nc|ENSG00000064419|Q9Y5L0-5|TNPO3;TNPO3|p.N628Mfs*22|1|0.13|ENSG00000064419|chr7:128980008-128980008|T/-|frameshift_variant	82.24051045832904	0.08786059719216216	2				NaN	NaN	0	NaN	6423	3356	9779
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9782	27.861	NaN	7961.5	30	0	1458.4	0.106	+			27600	MPNGDHIVSA	10	76	520.7445402948264	1039.4745276564527	2	520.7451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MPNGDHIVSA_	ENSG00000007168|ENST00000397195|PAFAH1B1;ENST00000572915.6_1_17:2573570-2586914:+|nuORF;nc|ENSG00000007168|P43034-2|PAFAH1B1	49.536043120802724	0.461275219792494	2				NaN	NaN	0	NaN	6424	3356	9779
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9783	27.863	NaN	5268.4	30	0	1087.4	0.106	+			26879	LWLLWPLWL	9	55	413.914548332046	1238.721815596338	3	413.9148254394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LWLLWPLWL_	ENST00000257940.6_1_12:56515445-56515574:+|nuORF	21.9598887501803	0.5980208138527809	2				NaN	NaN	0	NaN	6425	3356	9779
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9784	27.865	NaN	10284	30	0	4142.3	0.106			+	12017	FWMKLSRF	8	73	557.7974877539829	1113.5804225747656	2	557.798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FWMKLSRF_	REV__ENSG00000132437|ENST00000444124|DDC;REV__nc|ENSG00000132437|P20711-3|DDC;REV__nc|ENSG00000132437|P20711-4|DDC	74.25504064058377	0.37144338840759816	2				NaN	NaN	0	NaN	6426	3356	9779
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9785	27.867	NaN	1219	30	0	78.718	0.037	+			40624	SVAKTSVDILK	11	59	580.8473189751631	1159.6800850171262	2	580.8482666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVAKTSVDILK_	ENSG00000184445|ENST00000333479|KNTC1;KNTC1|p.K1646Nfs*2|2|0.35|ENSG00000184445|chr12:122603073-122603073|A/-|frameshift_variant;KNTC1|p.K1646Tfs*12|1|0.13|ENSG00000184445|chr12:122603073-122603074|AA/-|frameshift_variant;KNTC1|p.L1647Tfs*12|1|0.3|ENSG00000184445|chr12:122603072-122603073|-/A|frameshift_variant	35.495647763667336	0.6174708002554854	2				NaN	NaN	0	NaN	6427	3356	9779
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9786	27.867	NaN	3270	30	0	334.39	0.141	+			9569	ELGHTPPGP	9	62	452.7289890422859	903.4434251513718	2	452.7293701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ELGHTPPGP_	ENST00000369485.8_1_6:89321642-89321729:-|nuORF	25.450171626174864	0.5654022654467333	2				NaN	NaN	0	NaN	6428	3356	9779
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9804	27.906	NaN	27288	30	0	4044.3	0.214				-1	 	0	82	511.7788466584645	1021.543140383729	2	511.7792053222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6443	3359	9803
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9805	27.909	NaN	19532	30	0	4950.3	0.106	+			37433	SLHDTVFDKI	10	78	392.2079489124124	1173.6020173374372	3	392.20819091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLHDTVFDKI_	ABCC12|p.M936Yfs*84|1|0.32|ENSG00000140798|chr16:48104236-48104237|-/A|frameshift_variant;ABCC12|p.R1075Cfs*54|1|0.38|ENSG00000140798|chr16:48091182-48091183|-/CA|frameshift_variant;ENSG00000140798|ENST00000311303|ABCC12;nc|ENSG00000140798|Q96J65-2|ABCC12;nc|ENSG00000140798|Q96J65-5|ABCC12;nc|ENSG00000140798|Q96J65|ABCC12	34.172542307311794	0.6007644933930345	2				NaN	NaN	0	NaN	6444	3359	9803
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9806	27.911	NaN	12876	30	0	6189.4	0.106				-1	 	0	56	369.54465084746084	1105.6121231425825	3	369.544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6445	3359	9803
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9807	27.913	NaN	9180.2	30	0	2075	0.106				-1	 	0	73	466.76446803041273	931.5143831276255	2	466.76483154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6446	3359	9803
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9808	27.915	NaN	39821	30	0	22500	0.106				-1	 	0	81	359.2374042582318	1074.6903833748954	3	359.23748779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6447	3359	9803
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9809	27.917	NaN	11472	30	0	2323.8	0.035	+			17217	HVIENSNAF	9	75	515.750787336792	1029.4870217403839	2	515.751220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HVIENSNAF_	ENSG00000161800|ENST00000312377|RACGAP1	63.53385203322761	0.18415635464017938	2				NaN	NaN	0	NaN	6448	3359	9803
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9810	27.917	NaN	14078	30	0	3477.1	0.139	+			48099	VSTLKKEL	8	83	459.2863284830291	916.5581040328582	2	459.2865295410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VSTLKKEL_	REV__ENST00000487863.5_1_19:53057832-53058279:+|nuORF;tr|U7SZN9|U7SZN9_FUSNUBifunctionalfolatesynthesisproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00813PE=3SV=1	51.33545320467046	0.5859736979383976	2				NaN	NaN	0	NaN	6449	3359	9803
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9823	27.946	NaN	67103	30	0	14507	0.214				-1	 	0	110	401.2427404692711	1200.7063920080134	3	401.2431335449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6459	3362	9822
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9824	27.95	NaN	24472	30	0	18847	0.106				-1	 	0	50	343.1986684203697	684.3827839075394	2	343.1988220214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6460	3362	9822
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9825	27.952	NaN	10443	30	0	3041.3	0.106				-1	 	0	76	458.73969444474034	915.4648359562807	2	458.7398376464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6461	3362	9822
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9826	27.954	NaN	7915.4	30	0	755.8	0.106			+	27829	MSRSREKAK	9	80	554.7977298411653	1107.5809067491305	2	554.798583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_M(Oxidation (M))SRSREKAK_	REV__ENSG00000173320|ENST00000308497|STOX2;REV__nc|ENSG00000173320|Q9P2F5-2|STOX2	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	6462	3362	9822
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9827	27.956	NaN	10441	30	0	1147.4	0.106	+			38050	SPQRMRMK	8	73	525.271424124815	1048.5282953164299	2	525.2723388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_SPQRMRM(Oxidation (M))K_	KIF18B|p.G393Efs*91|1|0.13|ENSG00000186185|chr17:44932733-44932733|C/-|frameshift_variant	65.80317337860623	0.44433089765398776	2				NaN	NaN	0	NaN	6463	3362	9822
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9828	27.957	NaN	5489.2	30	0	696.75	0.034	+			42321	TAGAVTQCY	9	64	485.7178581025289	969.4211632718578	2	485.7181091308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_TAGAVTQC(Carbamidomethyl (C))Y_	ENSG00000105640|ENST00000222247|RPL18A	78.26377905018397	0.10505600812668463	2				NaN	NaN	0	NaN	6464	3362	9822
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9829	27.958	NaN	4876.8	30	0	1755.6	0.141	+			12856	GEPTNFVHTA	10	68	536.7584142206086	1071.5022755080172	2	536.7566528320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GEPTNFVHTA_	ENSG00000158985|ENST00000505065|CDC42SE2	68.84614121027924	0.2867470276772903	2				NaN	NaN	0	NaN	6465	3362	9822
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9842	27.987	NaN	18374	30	0	3247.1	0.214	+			38087	SPTNTVHMY	9	87	525.2388444728371	1048.463136012474	2	525.239990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SPTNTVHMY_	ENSG00000138592|ENST00000307179|USP8;nc|ENSG00000138592|P40818-2|USP8;USP8|p.K997Rfs*2|1|0.11|ENSG00000138592|chr15:50497178-50497178|A/-|frameshift_variant	171.38481719736927	0.0025305361306121837	2				NaN	NaN	0	NaN	6475	3365	9841
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9843	27.991	NaN	13211	30	0	2120	0.106	+			43155	TESTARVEL	9	78	503.26371315326355	1004.5128733733271	2	503.2639465332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TESTARVEL_	ENSG00000196235|ENST00000432763|SUPT5H;ENST00000599335.5_1_19:39959399-39965382:+|nuORF;nc|ENSG00000196235|O00267-2|SUPT5H;SUPT5H|p.P800Hfs*154|1|0.21|ENSG00000196235|chr19:39473425-39473425|C/-|frameshift_variant	96.0336014099291	0.047854655524928534	2				NaN	NaN	0	NaN	6476	3365	9841
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9844	27.993	NaN	5009.1	30	0	1299.3	0.106			+	1338	AETNKANSY	9	62	499.2325838097529	996.4506146863058	2	499.2327880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AETNKANSY_	REV__COLGALT2|p.R600H|1|0.28|ENSG00000198756|chr1:183938843-183938843|C/T|missense_variant;REV__ENSG00000198756|ENST00000361927|COLGALT2	62.107414245175825	0.1960472003779324	2				NaN	NaN	0	NaN	6477	3365	9841
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9845	27.995	NaN	4009.1	30	0	648.73	0.106	+			30259	PTAQPRAPSM	10	64	528.2679066288921	1054.521260324584	2	528.2691040039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PTAQPRAPSM_	MED25|p.G363R|1|0.21|ENSG00000104973|chr19:49830873-49830873|G/A|missense_variant	37.81151784470057	0.569310847604193	2				NaN	NaN	0	NaN	6478	3365	9841
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9846	27.996	NaN	5630.5	30	0	480.17	0.106	+			12447	GEDAPVRPL	9	67	477.25531653159464	NaN	0	477.255615234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GEDAPVRPL_	ENSG00000178467|ENST00000383729|P4HTM;ENST00000472301.5_1_3:49027419-49042675:+|nuORF;ENST00000484115.5_1_3:49027419-49028262:+|nuORF;nc|ENSG00000178467|Q9NXG6-2|P4HTM;nc|ENSG00000178467|Q9NXG6-3|P4HTM	54.776311868738084	0.17377682019723872	2				NaN	NaN	0	NaN	6479	3365	9841
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9847	27.998	NaN	5134.3	30	0	335.38	0.106	+			46357	VEKQPPQVL	9	70	519.3022505025713	1036.5899480719424	2	519.3028564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VEKQPPQVL_	ENSG00000166888|ENST00000300134|STAT6;nc|ENSG00000166888|P42226-2|STAT6;nc|ENSG00000166888|P42226-3|STAT6;STAT6|p.G815Efs*27|3|0.31|ENSG00000166888|chr12:57096672-57096672|C/-|frameshift_variant	58.2462437865262	0.22823408064396822	2				NaN	NaN	0	NaN	6480	3365	9841
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9848	28	NaN	2289.3	30	0	201.92	0.033			+	48723	VTTVSQPL	8	57	422.7417924755449	843.4690320178898	2	422.74212646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VTTVSQPL_	REV__PRPF8|p.R1163Q|1|0.21|ENSG00000174231|chr17:1673526-1673526|C/T|missense_variant	68.78682469695295	0.41700713582915416	2				NaN	NaN	0	NaN	6481	3365	9841
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9859	28.025	NaN	10762	30	0	1244.9	0.214	+			35248	SALHIAIEK	9	74	491.288849567453	980.563146201706	2	491.28985595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SALHIAIEK_	ENSG00000187688|ENST00000338560|TRPV2;TRPV2|p.I444Sfs*23|3|0.39|ENSG00000187688|chr17:16427521-16427521|G/-|frameshift_variant	83.6470233535746	0.08277643980271215	2				NaN	NaN	0	NaN	6489	3368	9858
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9860	28.029	NaN	10283	30	0	2152	0.106	+			39526	STFSAPLNK	9	69	482.7584181172454	NaN	0	482.7581481933594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STFSAPLNK_	ENSG00000163026|ENST00000295148|WDCP;nc|ENSG00000163026|Q9H6R7-2|WDCP	107.00750918261382	0.012399597248013027	2				NaN	NaN	0	NaN	6490	3368	9858
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9861	28.031	NaN	6644	30	0	940.18	0.106	+			4759	ATNAACASLLK	11	76	560.2942682972524	1118.5739836613047	2	560.2953491210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_ATNAAC(Carbamidomethyl (C))ASLLK_	ENSG00000134996|ENST00000346234|OSTF1;OSTF1|p.K191Rfs*11|1|0.32|ENSG00000134996|chr9:75140914-75140914|A/-|frameshift_variant	113.67052763333328	0.032425238213486376	2				NaN	NaN	0	NaN	6491	3368	9858
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9862	28.033	NaN	11636	30	0	2766.8	0.106				-1	 	0	70	458.59023218945765	2745.497734337146	6	458.75860595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6492	3368	9858
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9863	28.034	NaN	6875.5	30	0	521.42	0.106			+	9120	EGLENWHF	8	70	516.2332794430057	1030.4520059528113	2	516.2340087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EGLENWHF_	REV__ENST00000256458.4_1_3:10283936-10284227:+|nuORF	51.33545320467046	0.5859736979383976	2				NaN	NaN	0	NaN	6493	3368	9858
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9864	28.036	NaN	5422.4	30	0	1249.5	0.033	+			35387	SAQGKPLAL	9	56	442.7632535137728	883.5119540943456	2	442.763427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SAQGKPLAL_	ENSG00000100401|ENST00000356244|RANGAP1	77.31757898189308	0.1091473830098891	2				NaN	NaN	0	NaN	6494	3368	9858
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9865	28.037	NaN	4974.4	30	0	793.48	0.139	+			37712	SLSSPLNPK	9	64	471.7660079229573	941.5174629127146	2	471.7660217285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SLSSPLNPK_	BAZ1B|p.A1298Cfs*10|1|0.16|ENSG00000009954|chr7:73444083-73444084|-/G|frameshift_variant;BAZ1B|p.E800Kfs*16|1|0.08|ENSG00000009954|chr7:73477067-73477067|C/-|frameshift_variant;ENSG00000009954|ENST00000339594|BAZ1B;nc|ENSG00000009954|Q9UIG0-2|BAZ1B	71.87747018426188	0.13267044672804276	2				NaN	NaN	0	NaN	6495	3368	9858
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9876	28.064	NaN	45871	30	0	12636	0.215	+			39464	STFDTQITK	9	91	520.7660076697763	1039.5174624063525	2	520.7664794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STFDTQITK_	ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC;PRKDC|p.D2437Wfs*3|1|0.11|ENSG00000253729|chr8:47840161-47840162|-/CA|frameshift_variant;PRKDC|p.K3681Nfs*6|1|0.32|ENSG00000253729|chr8:47785174-47785177|TTCT/-|frameshift_variant;PRKDC|p.M3670*|1|0.5|ENSG00000253729|chr8:47785212-47785212|T/-|frameshift_variant;PRKDC|p.M3846Cfs*12|1|0.13|ENSG00000253729|chr8:47779047-47779047|T/-|frameshift_variant;PRKDC|p.M4020Cfs*2|1|0.31|ENSG00000253729|chr8:47776968-47776968|T/-|frameshift_variant;PRKDC|p.N3605Kfs*3|1|0.22|ENSG00000253729|chr8:47788993-47788994|-/T|frameshift_variant;PRKDC|p.N4037Ifs*15|1|0.17|ENSG00000253729|chr8:47776916-47776916|T/-|frameshift_variant;PRKDC|p.R2704Gfs*13|2|0.34|ENSG00000253729|chr8:47834238-47834238|T/-|frameshift_variant;PRKDC|p.S3402Ifs*16|1|0.04|ENSG00000253729|chr8:47799302-47799303|-/AAACCGTGAGTTAGAGGAGGTAA|frameshift_variant;PRKDC|p.S4099Qfs*6|1|0.25|ENSG00000253729|chr8:47774265-47774265|A/-|frameshift_variant;PRKDC|p.T3268Pfs*7|1|0.5|ENSG00000253729|chr8:47803426-47803426|T/-|frameshift_variant;PRKDC|p.W3401Cfs*4|1|0.01|ENSG00000253729|chr8:47799304-47799305|-/AATGAATA|frameshift_variant	233.56504053126972	4.3686271998660555E-13	2				NaN	NaN	0	NaN	6503	3371	9875
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9877	28.068	NaN	4590.4	30	0	448.67	0.106	+			20573	KFTPVASKF	9	74	512.7945142096661	1023.5744754861322	2	512.794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KFTPVASKF_	ENSG00000159840|ENST00000322764|ZYX;ENST00000446634.1_1_7:143080130-143081191:+|nuORF;nc|ENSG00000159840|Q15942-2|ZYX	68.84614121027924	0.14577793175421136	2				NaN	NaN	0	NaN	6504	3371	9875
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9878	28.069	NaN	12954	30	0	2428.9	0.106	+			41797	SVSQPIMVQR	10	80	572.8100403524818	1143.6055277717635	2	572.8112182617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVSQPIMVQR_	ENSG00000134644|ENST00000426105|PUM1;nc|ENSG00000134644|Q14671-2|PUM1;nc|ENSG00000134644|Q14671|PUM1	155.5333702123263	0.007513046059728936	2				NaN	NaN	0	NaN	6505	3371	9875
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9879	28.071	NaN	19359	30	0	7105.8	0.106				-1	 	0	83	543.3241023167706	1084.633651700341	2	543.3248291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6506	3371	9875
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9880	28.073	NaN	4062	30	0	539.4	0.106				-1	 	0	53	390.5602342297809	1168.6588732895427	3	390.56048583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6507	3371	9875
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9881	28.075	NaN	5544	30	0	1139.5	0.106	+			26751	LVNLFGCF	8	73	485.2477694801735	968.480986027147	2	485.2470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_LVNLFGC(Carbamidomethyl (C))F_	ENSG00000123143|ENST00000242783|PKN1;ENST00000585839.5_1_19:14578398-14580330:+|nuORF;nc|ENSG00000123143|Q16512-2|PKN1	54.76467175910256	0.5536104764165384	2				NaN	NaN	0	NaN	6508	3371	9875
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9882	28.077	NaN	4025.5	30	0	369.74	0.039			+	15377	GTWRCKQQCLA	11	60	431.87825075662414	1292.6129228700725	3	431.8786315917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GTWRCKQQCLA_	REV__PCOLCE2|p.R303W|1|0.16|ENSG00000163710|chr3:142823574-142823574|G/A|missense_variant	24.231819034082204	0.7356191775841856	2				NaN	NaN	0	NaN	6509	3371	9875
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9894	28.102	NaN	107690	30	0	37785	0.214				-1	 	0	109	372.23214826921264	1113.674615407838	3	372.2324523925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6518	3374	9893
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9895	28.106	NaN	16103	30	0	2250.6	0.106				-1	 	0	82	538.7350224530777	1075.4554919729553	2	538.736083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6519	3374	9893
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9896	28.108	NaN	11785	30	0	2448.9	0.106				-1	 	0	77	493.8153782525785	985.616203571957	2	493.8156433105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6520	3374	9893
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9897	28.11	NaN	7973.8	30	0	1486.9	0.106				-1	 	0	71	501.2191941771485	1000.423835421097	2	501.2196350097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6521	3374	9893
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9898	28.111	NaN	5275.4	30	0	626.13	0.106			+	31919	QQLQEQQQQL	10	63	424.21710503904325	1269.6294857173298	3	424.2177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QQLQEQQQQL_	REV__ENSG00000236609|ENST00000457543|ZNF853;REV__ENSG00000236609|ENST00000457543|ZNF853	33.921630207806714	0.6028135429846169	2				NaN	NaN	0	NaN	6522	3374	9893
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9899	28.113	NaN	4150.5	30	0	1322	0.106				-1	 	0	55	460.25285559637996	918.4911582595599	2	461.25537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6523	3374	9893
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9900	28.115	NaN	3410.7	30	0	410.46	0.035	+			22675	KVADFGLAR	9	67	488.78209042341297	NaN	0	488.78204345703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KVADFGLAR_	ENSG00000105976|ENST00000397752|MET;ENSG00000111816|ENST00000606080|FRK;ENSG00000125508|ENST00000217188|SRMS;ENSG00000164078|ENST00000296474|MST1R;ENSG00000197122|ENST00000373578|SRC;ENST00000411578.6_1_3:49924742-49933170:-|nuORF;ENST00000477066.5_1_20:36025122-36031779:+|nuORF;ENST00000493775.1_1_20:36030831-36031351:+|nuORF;nc|ENSG00000105976|P08581-2|MET;nc|ENSG00000111816|P42685-2|FRK;nc|ENSG00000164078|Q04912-2|MST1R;nc|ENSG00000164078|Q04912-7|MST1R;nc|ENSG00000197122|P12931-2|SRC;nc|ENSG00000197122|P12931-3|SRC	61.76455937419982	0.141793055474112	2				NaN	NaN	0	NaN	6524	3374	9893
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9914	28.145	NaN	11608	30	0	2272.9	0.214			+	-1	CLTYKMSR	8	67	509.24621488063644	1016.4778768280729	2	509.24749755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_CLTYKM(Oxidation (M))SR_	REV__ENSG00000101298|ENST00000381867|SNPH;REV__nc|ENSG00000101298|O15079|SNPH	58.78195531508484	0.5138399468736706	2				NaN	NaN	0	NaN	6535	3377	9913
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9915	28.149	NaN	11195	30	0	2238.7	0.106			+	24959	LLALKQEK	8	72	471.802320475717	941.590088018234	2	471.8021545410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LLALKQEK_	REV__ENSG00000058453|ENST00000375541|CROCC;REV__nc|ENSG00000058453|Q5TZA2-2|CROCC	44.116797842482775	0.6307669463330267	2				NaN	NaN	0	NaN	6536	3377	9913
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9916	28.151	NaN	10464	30	0	1648.6	0.106				-1	 	0	64	414.25229960300726	413.24502313640727	1	414.25213623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6537	3377	9913
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9917	28.152	NaN	6675.8	30	0	420.74	0.106			+	21772	KQSFAKGCQI	10	75	555.2921991103665	1108.5698452875329	2	555.7939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KQSFAKGCQI_	REV__ENSG00000198040|ENST00000539354|ZNF84	44.377184641726394	0.5088115166961078	2				NaN	NaN	0	NaN	6538	3377	9913
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9918	28.154	NaN	3357.8	30	0	454.16	0.106				-1	 	0	67	529.3209424996475	1056.6273320660948	2	529.322021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6539	3377	9913
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9919	28.156	NaN	7775.5	30	0	1967.4	0.036				-1	 	0	69	347.8779717776396	1040.6120859331188	3	347.8782653808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6540	3377	9913
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9920	28.157	NaN	4504.8	30	0	964.46	0.141	+			45429	TVYEEMMAK	9	66	559.248140851873	1116.481728770546	2	559.248779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_TVYEEMM(Oxidation (M))AK_	ENSG00000144659|ENST00000650617|SLC25A38;SLC25A38|p.G301V|1|0.09|ENSG00000144659|chr3:39396507-39396507|G/T|missense_variant	72.87924865735499	0.12833875048249987	2				NaN	NaN	0	NaN	6541	3377	9913
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9934	28.188	NaN	37982	30	0	3851.9	0.214	+			44119	TPYKGGNLY	9	93	506.75799290798057	1011.5014328827612	2	506.7579650878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TPYKGGNLY_	ENSG00000144674|ENST00000361924|GOLGA4;nc|ENSG00000144674|Q13439-3|GOLGA4;nc|ENSG00000144674|Q13439-4|GOLGA4;nc|ENSG00000144674|Q13439-5|GOLGA4	95.81516180277367	0.04847050768394289	2				NaN	NaN	0	NaN	6552	3380	9933
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9935	28.192	NaN	14329	30	0	2471.8	0.106	+			6413	AVVQTLVAK	9	77	464.7944191715923	927.5742854099847	2	464.794677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVVQTLVAK_	ENSG00000165671|ENST00000439151|NSD1;nc|ENSG00000165671|Q96L73-2|NSD1;nc|ENSG00000165671|Q96L73-3|NSD1	146.78539889680295	0.007618400906539062	2				NaN	NaN	0	NaN	6553	3380	9933
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9936	28.194	NaN	9776.9	30	0	1223.5	0.106				-1	 	0	60	422.74733170673494	843.4801104802699	2	422.7477722167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6554	3380	9933
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9937	28.196	NaN	7272.4	30	0	769.36	0.106	+			31630	QMIEAYRKA	9	72	555.2921991103665	1108.5698452875329	2	555.2931518554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QMIEAYRKA_	tr|U7T8M1|U7T8M1_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00100PE=4SV=1	51.19269402634007	0.2889735674168909	2				NaN	NaN	0	NaN	6555	3380	9933
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9938	28.197	NaN	17029	30	0	3168.3	0.106	+			3230	ASLATTLTK	9	81	453.2682915518569	904.5220301705139	2	453.2684020996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASLATTLTK_	ENSG00000129083|ENST00000439561|COPB1;ENST00000526191.1_1_11:14496007-14497407:-|nuORF	114.8945686534367	0.024290463251177924	2				NaN	NaN	0	NaN	6556	3380	9933
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9939	28.199	NaN	9683.6	30	0	1181	0.034				-1	 	0	78	483.2579392555795	482.2506627889795	1	483.2568054199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6557	3380	9933
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9940	28.2	NaN	22059	30	0	5970.2	0.144			+	18400	IRPWTEETF	9	76	393.532548631366	1177.5758164942981	3	393.5328369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IRPWTEETF_	REV__ENTPD3|p.Q445R|1|0.33|ENSG00000168032|chr3:40423944-40423944|A/G|missense_variant	32.81241826257853	0.4965981579233955	2				NaN	NaN	0	NaN	6558	3380	9933
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9954	28.231	NaN	21255	30	0	3297.6	0.215				-1	 	0	81	454.24712464043085	906.4796963476617	2	454.2473449707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6569	3383	9953
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9955	28.235	NaN	26861	30	0	3365.2	0.106	+			2684	AQNSVIIVDK	10	89	543.8107343544149	1085.6069157756297	2	543.8118286132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AQNSVIIVDK_	ENSG00000072274|ENST00000360110|TFRC	153.1020116777495	0.007944751224360695	2				NaN	NaN	0	NaN	6570	3383	9953
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9956	28.237	NaN	10326	30	0	1717.4	0.106	+			40535	SVAALPVCK	9	72	472.7648752818929	943.5151976305858	2	472.7651672363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SVAALPVC(Carbamidomethyl (C))K_	ENSG00000007255|ENST00000585934|TRAPPC6A;nc|ENSG00000007255|O75865-2|TRAPPC6A	90.36981228632155	0.0638227155548745	2				NaN	NaN	0	NaN	6571	3383	9953
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9957	28.239	NaN	2654.6	30	0	295.35	0.106	+			34292	RTLGSDSVILK	11	70	594.8507505138715	1187.686948094543	2	594.8511352539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RTLGSDSVILK_	ENST00000509320.5_1_14:73404720-73412622:+|nuORF	86.88156770896713	0.11154061753057586	2				NaN	NaN	0	NaN	6572	3383	9953
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9958	28.241	NaN	6966.8	30	0	1558.6	0.106	+			40527	STYYNPSLK	9	73	536.7672528040684	1071.5199526749368	2	536.7691650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STYYNPSLK_	nc|ENSG00000211952|A0A0C4DH34|IGHV4-28;nc|ENSG00000211959|P01824|IGHV4-39;nc|ENSG00000231475|A0A087WSY4|IGHV4-30-2;nc|ENSG00000231475|P0DP07|IGHV4-31	58.2462437865262	0.22823408064396822	2				NaN	NaN	0	NaN	6573	3383	9953
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9959	28.242	NaN	8057.8	30	0	1490.1	0.035	+			11998	FVTKPNSAL	9	69	488.7768605217691	975.5391681103382	2	488.77691650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FVTKPNSAL_	ENSG00000100401|ENST00000356244|RANGAP1	72.87924865735499	0.12833875048249987	2				NaN	NaN	0	NaN	6574	3383	9953
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9960	28.243	NaN	11384	30	0	1405.6	0.142			+	51061	YLKMYGDVM	9	74	576.2587652492003	1150.5029775652006	2	576.2598266601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Oxidation (M)	_YLKM(Oxidation (M))YGDVM(Oxidation (M))_	REV__ENSG00000115593|ENST00000419482|SMYD1	65.80317337860623	0.1652391959156183	2				NaN	NaN	0	NaN	6575	3383	9953
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9973	28.272	NaN	84938	30	0	12344	0.214				-1	 	0	102	444.2503938898695	886.486234846539	2	444.25048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6585	3386	9972
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9974	28.276	NaN	11997	30	0	3458.7	0.106				-1	 	0	69	357.23254053070616	1068.6757921923186	3	357.2327880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6586	3386	9972
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9975	28.278	NaN	35028	30	0	4021.2	0.106				-1	 	0	87	533.7973200367135	1065.5800871402269	2	533.79833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6587	3386	9972
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9976	28.28	NaN	5192.3	30	0	805.09	0.106			+	6431	AVVTTRLQSQ	10	64	551.8138416063813	1101.6131302795625	2	551.8145141601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVVTTRLQSQ_	REV__ENSG00000170873|ENST00000518547|MTSS1;REV__ENST00000472084.2_1_8:125711737-125740196:-|nuORF;REV__ENST00000524243.5_1_8:125710354-125740196:-|nuORF;REV__MTSS1|p.P703Qfs*18|1|0.38|ENSG00000170873|chr8:124553152-124553152|G/-|frameshift_variant;REV__nc|ENSG00000170873|O43312-4|MTSS1;REV__nc|ENSG00000170873|O43312-5|MTSS1	29.170058357718403	0.6416167986984785	2				NaN	NaN	0	NaN	6588	3386	9972
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9977	28.281	NaN	8042	30	0	1091.2	0.106	+			15803	GVVQKEAAI	9	66	457.7705503991684	913.5265478651369	2	457.77239990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GVVQKEAAI_	tr|U7T290|U7T290_FUSNULargeribosomalsubunitproteinuL24OS=FusobacteriumnucleatumCTI-5OX=1316586GN=rplXPE=3SV=1	58.78195531508484	0.22376836668196862	2				NaN	NaN	0	NaN	6589	3386	9972
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9978	28.283	NaN	6644.1	30	0	1097.1	0.035	+			27564	MPFKKGAAF	9	65	498.77084245664685	995.5271319800937	2	498.7703552246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MPFKKGAAF_	ENSG00000171747|ENST00000307751|LGALS4	71.29570347882199	0.13518600952103718	2				NaN	NaN	0	NaN	6590	3386	9972
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9979	28.284	NaN	7981.4	30	0	1668.1	0.14			+	38734	SSLLGTLSKL	10	67	509.8108501184562	1017.6071473037124	2	509.81097412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSLLGTLSKL_	REV__ENSG00000127481|ENST00000375254|UBR4;REV__nc|ENSG00000127481|Q5T4S7-2|UBR4;REV__nc|ENSG00000127481|Q5T4S7-3|UBR4;REV__nc|ENSG00000127481|Q5T4S7-4|UBR4;REV__UBR4|p.C4515Wfs*2|1|0.06|ENSG00000127481|chr1:19095626-19095626|G/-|frameshift_variant;REV__UBR4|p.L4771Cfs*7|1|0.25|ENSG00000127481|chr1:19088878-19088878|G/-|frameshift_variant	36.31764250033197	0.5830761606467809	2				NaN	NaN	0	NaN	6591	3386	9972
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9992	28.313	NaN	106120	30	0	9725.3	0.212	+			34629	RVQEAVESMVK	11	97	638.3402669904283	1274.6659810476565	2	638.3399047851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVQEAVESMVK_	ENSG00000035141|ENST00000430566|FAM136A;ENST00000460307.1_1_2:70528513-70529143:-|nuORF;ENST00000498665.1_1_2:70527944-70529143:-|nuORF;nc|ENSG00000035141|Q96C01|FAM136A	183.85253310579768	5.62367332770389E-06	2				NaN	NaN	0	NaN	6601	3389	9991
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9993	28.317	NaN	40600	30	0	4141.7	0.106	+			34630	RVQEAVESMVK	11	88	425.8951284540172	1274.6635559622516	3	425.8955993652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RVQEAVESMVK_	ENSG00000035141|ENST00000430566|FAM136A;ENST00000460307.1_1_2:70528513-70529143:-|nuORF;ENST00000498665.1_1_2:70527944-70529143:-|nuORF;nc|ENSG00000035141|Q96C01|FAM136A	112.84542089569574	0.034131029133046886	2				NaN	NaN	0	NaN	6602	3389	9991
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9994	28.319	NaN	7182.1	30	0	1136.3	0.106			+	50372	WWFGPSVL	8	77	496.2557190779523	990.4968852227046	2	496.25616455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_WWFGPSVL_	REV__ENST00000543587.5_3_11:71822512-71823788:-|nuORF	54.76467175910256	0.5536104764165384	2				NaN	NaN	0	NaN	6603	3389	9991
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9995	28.32	NaN	16145	30	0	2938.6	0.106	+			18761	ITNDGATILK	10	80	523.2973144987931	1044.580076064386	2	523.2984008789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ITNDGATILK_	CCT4|p.T490Lfs*30|1|0.4|ENSG00000115484|chr2:61872105-61872105|T/-|frameshift_variant;ENSG00000115484|ENST00000394440|CCT4;ENSG00000120438|ENST00000321394|TCP1;ENST00000538128.5_2_6:160206507-160210586:-|nuORF;ENST00000543532.5_1_6:160205081-160210626:-|nuORF;ENST00000544255.5_1_6:160205081-160210586:-|nuORF;TCP1|p.A232Gfs*7|1|0.05|ENSG00000120438|chr6:159784043-159784044|-/C|frameshift_variant	169.9932187642096	0.0036876354521960214	2				NaN	NaN	0	NaN	6604	3389	9991
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9996	28.322	NaN	4276	30	0	2747.6	0.106				-1	 	0	36	329.2012774427124	656.3880019522248	2	329.2015075683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6605	3389	9991
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9997	28.324	NaN	7935.8	30	0	4733.3	0.106				-1	 	0	59	440.72025574234095	879.4259585514819	2	440.7208251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6606	3389	9991
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9998	28.326	NaN	4973.7	30	0	619.22	0.034	+			8150	EAAGNMVHV	9	68	464.2210755387408	926.4275981442817	2	464.22125244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EAAGNMVHV_	ENSG00000205090|ENST00000378733|TMEM240	51.33545320467046	0.2872990594074956	2				NaN	NaN	0	NaN	6607	3389	9991
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10009	28.351	NaN	24612	30	0	12113	0.214				-1	KMVSLFCGII	10	56	376.20462582300445	1125.5920480692134	3	376.20501708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_KM(Oxidation (M))VSLFCGII_	ENSG00000168131|ENST00000303324|OR2B2	23.52269567125451	0.6877354443478558	2				NaN	NaN	0	NaN	6615	3392	10008
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10010	28.355	NaN	47081	30	0	26216	0.106				-1	 	0	75	492.2608514168095	982.507149900419	2	492.26129150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6616	3392	10008
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10011	28.357	NaN	40396	30	0	24683	0.106				-1	 	0	68	432.2218855264207	1293.643827179462	3	432.2221984863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6617	3392	10008
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10012	28.359	NaN	8457.1	30	0	1837.8	0.106				-1	 	0	59	467.752698434349	933.490843935498	2	467.75286865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6618	3392	10008
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10013	28.36	NaN	13792	30	0	4621.4	0.106			+	-1	DIMKCLNLTK	10	66	398.8781727487724	1193.6126888465171	3	398.87884521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_DIM(Oxidation (M))KCLNLTK_	REV__ENSG00000144028|ENST00000323853|SNRNP200	53.59686742100583	0.4240759338601513	2				NaN	NaN	0	NaN	6619	3392	10008
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10014	28.362	NaN	13974	30	0	3837	0.106			+	6896	CLQRPGAL	8	80	457.7468305786979	913.4791082241958	2	457.7474060058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_C(Carbamidomethyl (C))LQRPGAL_	REV__ENST00000452463.5_1_7:137686396-137686669:-|nuORF	77.94384346573518	0.3407065481025094	2				NaN	NaN	0	NaN	6620	3392	10008
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10015	28.364	NaN	8453	30	0	2538.1	0.034			+	33487	RKDIYSAP	8	73	475.25824394633673	948.5019349594735	2	475.25848388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RKDIYSAP_	REV__ENSG00000107957|ENST00000369774|SH3PXD2A;REV__nc|ENSG00000107957|Q5TCZ1-2|SH3PXD2A;REV__nc|ENSG00000107957|Q5TCZ1-3|SH3PXD2A;REV__SH3PXD2A|p.Q1067Vfs*5|1|0.08|ENSG00000107957|chr10:103602018-103602019|TG/-|frameshift_variant;REV__SH3PXD2A|p.S529Afs*43|5|0.21|ENSG00000107957|chr10:103603634-103603634|G/-|frameshift_variant;REV__SH3PXD2A|p.V1096Cfs*22|1|0.36|ENSG00000107957|chr10:103601932-103601932|C/-|frameshift_variant	40.5726180659479	0.6527593143185008	2				NaN	NaN	0	NaN	6621	3392	10008
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10027	28.39	NaN	25434	30	0	4250.7	0.214	+			28051	NAAQTSVAY	9	73	462.7257289243123	923.4369049154246	2	462.72442626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAAQTSVAY_	ENSG00000113643|ENST00000231572|RARS1;nc|ENSG00000113643|P54136-2|RARS1	101.25262130126117	0.03792372629710479	2				NaN	NaN	0	NaN	6630	3395	10026
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10028	28.393	NaN	45779	30	0	11665	0.106	+			35884	SEERFRPSL	9	92	560.7902032000131	1119.5658534668262	2	560.7913818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEERFRPSL_	CTNNA1|p.K493Nfs*31|1|0.19|ENSG00000044115|chr5:138917827-138917827|A/-|frameshift_variant;CTNNA1|p.T832*|1|0.29|ENSG00000044115|chr5:138933859-138933862|CAGA/-|frameshift_variant;ENSG00000044115|ENST00000302763|CTNNA1;ENST00000522730.1_1_5:138160461-138163428:+|nuORF;nc|ENSG00000044115|P35221-2|CTNNA1	70.8162118820467	0.13725933411854815	2				NaN	NaN	0	NaN	6631	3395	10026
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10029	28.395	NaN	7442.1	30	0	996.7	0.106	+			19818	KEDITQEFPG	10	75	582.281991959729	1162.549430986258	2	582.282958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEDITQEFPG_	ENSG00000110321|ENST00000339995|EIF4G2;ENST00000525606.5_1_11:10819365-10820979:-|nuORF;ENST00000534470.1_1_11:10820460-10820850:-|nuORF;nc|ENSG00000110321|P78344-2|EIF4G2	115.49404669440601	0.03369372856552391	2				NaN	NaN	0	NaN	6632	3395	10026
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10030	28.397	NaN	9340.1	30	0	2951.5	0.106	+			44179	TQTQFFHVK	9	65	379.2009230581394	1134.5809397746182	3	379.2012939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TQTQFFHVK_	ENSG00000163564|ENST00000368140|PYHIN1;ENSG00000163565|ENST00000295809|IFI16;ENST00000485134.1_1_1:158911778-158914889:+|nuORF;ENST00000493884.5_1_1:158984458-159022017:+|nuORF;nc|ENSG00000163564|Q6K0P9-2|PYHIN1;nc|ENSG00000163564|Q6K0P9-3|PYHIN1;nc|ENSG00000163564|Q6K0P9-4|PYHIN1;nc|ENSG00000163565|Q16666-2|IFI16;nc|ENSG00000163565|Q16666-3|IFI16;nc|ENSG00000163565|Q16666-6|IFI16;nc|ENSG00000163565|Q16666-8|IFI16	33.921630207806714	0.48623198279849766	2				NaN	NaN	0	NaN	6633	3395	10026
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10031	28.399	NaN	8677.5	30	0	1159.8	0.106				-1	 	0	70	486.74229644606595	971.4700399589319	2	486.7429504394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6634	3395	10026
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10032	28.401	NaN	7809.2	30	0	2226.2	0.035			+	8646	EDLHNQIF	8	72	508.24535376435676	1014.4761545955135	2	508.2460021972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EDLHNQIF_	REV__DNAH8|p.D4227Afs*7|1|0.04|ENSG00000124721|chr6:39008929-39008930|-/CAGTGTT|frameshift_variant;REV__ENSG00000124721|ENST00000327475|DNAH8;REV__nc|ENSG00000124721|Q96JB1-2|DNAH8;REV__nc|ENSG00000124721|Q96JB1|DNAH8	44.116797842482775	0.6307669463330267	2				NaN	NaN	0	NaN	6635	3395	10026
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10033	28.401	NaN	6496.6	30	0	920.29	0.14	+			39403	STDPNSVFR	9	75	511.7485085726041	1021.4824642120083	2	511.74884033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STDPNSVFR_	ENSG00000113240|ENST00000316308|CLK4;ENST00000519132.5_1_5:178032378-178044013:-|nuORF;ENST00000519583.5_1_5:178030620-178044013:-|nuORF;ENST00000520878.5_1_5:178030620-178044471:-|nuORF;ENST00000522136.5_1_5:178032355-178045581:-|nuORF	71.87747018426188	0.13267044672804276	2				NaN	NaN	0	NaN	6636	3395	10026
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10045	28.429	NaN	46640	30	0	13022	0.214	+			44413	TSLPSAICK	9	85	488.7592385772849	975.5039242213699	2	488.7599182128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_TSLPSAIC(Carbamidomethyl (C))K_	ENSG00000177731|ENST00000327031|FLII;ENST00000578101.5_1_17:18148454-18160363:-|nuORF;FLII|p.K628Rfs*27|1|0.37|ENSG00000177731|chr17:18249178-18249178|T/-|frameshift_variant;FLII|p.S470Afs*32|1|0.36|ENSG00000177731|chr17:18251454-18251454|G/-|frameshift_variant;nc|ENSG00000177731|Q13045-2|FLII;nc|ENSG00000177731|Q13045-3|FLII	148.98678547993487	0.0071052929883181565	2				NaN	NaN	0	NaN	6645	3398	10044
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10046	28.432	NaN	8735.9	30	0	1276.6	0.106				-1	ATCLEGALK	9	79	481.75238576800325	NaN	0	481.75213623046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_ATC(Carbamidomethyl (C))LEGALK_	ENSG00000131459|ENST00000253778|GFPT2;ENSG00000198380|ENST00000357308|GFPT1;GFPT1|p.Y567del|1|0.31|ENSG00000198380|chr2:69329321-69329323|ATA/-|inframe_deletion;nc|ENSG00000198380|Q06210-2|GFPT1	80.45461616416974	0.0698259577396595	2				NaN	NaN	0	NaN	6646	3398	10044
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10047	28.434	NaN	8622.9	30	0	522.69	0.106	+			27247	MERIMKAQAL	10	84	595.8222078477637	1189.6298627623273	2	595.8229370117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MERIMKAQAL_	ENSG00000080824|ENST00000216281|HSP90AA1;ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000378770.1_1_4:190394307-190396341:+|nuORF;ENST00000506915.1_1_4:190395906-190396341:+|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000205100|Q58FG1|HSP90AA4P	93.44185321454538	0.11136857881027329	2				NaN	NaN	0	NaN	6647	3398	10044
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10048	28.436	NaN	12423	30	0	2802.4	0.106				-1	 	0	68	493.8153782525785	985.616203571957	2	493.815673828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6648	3398	10044
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10049	28.438	NaN	14096	30	0	2719.7	0.106	+			42386	TAIREAQTF	9	73	518.77514400301	NaN	0	518.7755126953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TAIREAQTF_	BAZ1B|p.A1298Cfs*10|1|0.16|ENSG00000009954|chr7:73444083-73444084|-/G|frameshift_variant;ENSG00000009954|ENST00000339594|BAZ1B;nc|ENSG00000009954|Q9UIG0-2|BAZ1B	91.26522074875469	0.03904588892501484	2				NaN	NaN	0	NaN	6649	3398	10044
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10050	28.44	NaN	8806	30	0	1598	0.034	+			9859	EQARLLAL	8	68	457.2762693737006	NaN	0	457.27630615234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EQARLLAL_	ENST00000532857.1_1_18:74155078-74202646:-|nuORF	47.91560031466742	1.7418937515398478	2				NaN	NaN	0	NaN	6650	3398	10044
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10051	28.44	NaN	2031.5	30	0	283.3	0.144	+			50274	WRMEWEGGLY	10	57	663.8009195757934	1325.5872862183867	2	663.7991333007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_WRMEWEGGLY_	ENST00000432223.2_1_11:73141522-73179519:-|nuORF	20.94693142431847	0.7087701759873708	2				NaN	NaN	0	NaN	6651	3398	10044
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10063	28.468	NaN	12197	30	0	2420.9	0.214				-1	 	0	67	409.73400158675145	817.4534502403029	2	409.7344055175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6660	3401	10062
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10064	28.471	NaN	2987.9	30	0	1549.2	0.106				-1	RRAHTGEK	8	28	332.84893041775	995.5249618534501	3	332.8492736816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))RRAHTGEK_	ENSG00000125945|ENST00000314011|ZNF436;ENSG00000197037|ENST00000394152|ZSCAN25;ENSG00000197162|ENST00000395216|ZNF785;ENSG00000198105|ENST00000395867|ZNF248;nc|ENSG00000197037|Q6NSZ9-2|ZSCAN25;nc|ENSG00000197037|Q6NSZ9-3|ZSCAN25;nc|ENSG00000197162|A8K8V0-2|ZNF785;ZNF785|p.A257T|1|0.27|ENSG00000197162|chr16:30583009-30583009|C/T|missense_variant	19.359975847455235	0.7988239741663654	2				NaN	NaN	0	NaN	6661	3401	10062
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10065	28.473	NaN	17397	30	0	4041.4	0.106	+			7067	CVCDRIKGA	9	80	482.73938751465613	963.4642220961123	2	482.7400207519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_CVCDRIKGA_	ENST00000407959.1_1_6:5788581-5788740:-|nuORF	76.7741389293348	0.11149722112137898	2				NaN	NaN	0	NaN	6662	3401	10062
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10066	28.475	NaN	7713.3	30	0	1022.7	0.106			+	-1	PEMIESEPL	9	77	530.7479579716677	1059.4813630101353	2	530.7495727539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_PEM(Oxidation (M))IESEPL_	REV__ENST00000588224.1_1_10:118425062-118429712:-|nuORF	38.80614096846853	0.43426287593479557	2				NaN	NaN	0	NaN	6663	3401	10062
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10067	28.477	NaN	11110	30	0	2143.2	0.106	+			36431	SEVAMHSL	8	66	437.2096979022116	872.4048428712232	2	437.2101745605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SEVAMHSL_	ENSG00000100290|ENST00000216115|BIK	90.77665401227738	0.27511901818546464	2				NaN	NaN	0	NaN	6664	3401	10062
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10068	28.479	NaN	4589.3	30	0	695.24	0.035	+			3817	ATAIDIATSK	10	72	495.7760920685076	989.5376312038152	2	495.7768859863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATAIDIATSK_	ENSG00000165868|ENST00000369209|HSPA12A	55.08391021199286	0.41055145962533396	2				NaN	NaN	0	NaN	6665	3401	10062
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10069	28.479	NaN	5137.2	30	0	825.93	0.14	+			7977	DSTTGFLGKT	10	64	513.7580938395056	1025.501634745811	2	513.7592163085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DSTTGFLGKT_	ENSG00000105829|ENST00000222547|BET1	45.97224482568171	0.49411383603842696	2				NaN	NaN	0	NaN	6666	3401	10062
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10082	28.508	NaN	37812	30	0	5971	0.214	+			38799	SSMTAVLQK	9	92	482.759544916096	963.504536898992	2	482.7601318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSMTAVLQK_	ENST00000470658.1_1_21:44293721-44296875:-|nuORF	132.757866228626	0.013877640931359021	2				NaN	NaN	0	NaN	6676	3404	10081
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10083	28.512	NaN	22173	30	0	2863.2	0.106			+	30329	PTSALWSY	8	93	462.7257289243123	923.4369049154246	2	463.2294006347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PTSALWSY_	REV__ENSG00000198570|ENST00000680073|RD3	40.5726180659479	0.6527593143185008	2				NaN	NaN	0	NaN	6677	3404	10081
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10084	28.514	NaN	26095	30	0	2853.2	0.106	+			33077	REKLQEEML	9	90	588.3074002758491	1174.600247618498	2	588.3079833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_REKLQEEML_	ENSG00000026025|ENST00000544301|VIM;ENST00000485947.1_1_10:17271421-17272784:+|nuORF	162.63603312974413	0.004023911058767669	2				NaN	NaN	0	NaN	6678	3404	10081
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10085	28.516	NaN	3886.2	30	0	410.96	0.106			+	7942	DSLATAGVL	9	62	423.7314836703429	845.4484144074859	2	423.7317810058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DSLATAGVL_	REV__CAPN12|p.A409Lfs*30|1|0.35|ENSG00000182472|chr19:38737293-38737293|C/-|frameshift_variant;REV__ENSG00000182472|ENST00000328867|CAPN12	55.50420428727701	0.2510918378945873	2				NaN	NaN	0	NaN	6679	3404	10081
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10086	28.518	NaN	6490.2	30	0	2134.8	0.106				-1	 	0	70	458.77604903694777	915.5375451406956	2	460.7814025878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6680	3404	10081
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10087	28.519	NaN	2078.5	30	0	214.16	0.106			+	13059	GFAKGCAG	8	48	355.6678823440958	709.3212117549916	2	355.6681823730469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GFAKGCAG_	REV__ENSG00000250571|ENST00000340042|GLI4;REV__ENST00000523812.1_1_8:144357822-144358971:+|nuORF	5.08689130490037	0.7762486542322466	2				NaN	NaN	0	NaN	6681	3404	10081
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10088	28.521	NaN	7475.9	30	0	1047	0.039			+	-1	PMMVMPVGNCI	11	61	427.52240178566313	1279.5453759571894	3	427.5226745605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C),2 Oxidation (M)	_PM(Oxidation (M))M(Oxidation (M))VMPVGNC(Carbamidomethyl (C))I_	REV__ENSG00000167165|ENST00000305139|UGT1A6;REV__ENSG00000241119|ENST00000354728|UGT1A9;REV__ENSG00000241635|ENST00000305208|UGT1A1;REV__ENSG00000242366|ENST00000373450|UGT1A8;REV__ENSG00000242515|ENST00000344644|UGT1A10;REV__ENSG00000244122|ENST00000373426|UGT1A7;REV__ENSG00000244474|ENST00000373409|UGT1A4;REV__nc|ENSG00000167165|P19224-2|UGT1A6;REV__nc|ENSG00000167165|P19224-3|UGT1A6;REV__nc|ENSG00000241119|O60656-2|UGT1A9;REV__nc|ENSG00000241635|P22309-2|UGT1A1;REV__nc|ENSG00000242366|Q9HAW9-2|UGT1A8;REV__nc|ENSG00000242515|Q9HAW8-2|UGT1A10;REV__nc|ENSG00000244122|Q9HAW7-2|UGT1A7;REV__nc|ENSG00000244474|P22310-2|UGT1A4;REV__nc|ENSG00000288702|P35503-3|UGT1A3;REV__nc|ENSG00000288702|P35503|UGT1A3;REV__nc|ENSG00000288705|P35504-2|UGT1A5;REV__nc|ENSG00000288705|P35504|UGT1A5	20.030474535948922	0.7766990143561855	2				NaN	NaN	0	NaN	6682	3404	10081
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10100	28.547	NaN	7894.4	30	0	1665.8	0.214				-1	 	0	72	528.7581221538869	1055.5016913745737	2	528.7595825195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6691	3407	10099
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10101	28.55	NaN	5357.3	30	0	1101.6	0.106				-1	 	0	71	493.8153782525785	985.616203571957	2	493.815673828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6692	3407	10099
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10102	28.552	NaN	12825	30	0	4502.9	0.106	+			41621	SVQPSHLFIQ	10	50	385.8763729778062	1154.6072895336188	3	385.876708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVQPSHLFIQ_	ENSG00000103126|ENST00000262320|AXIN1;ENST00000461023.5_1_16:343426-396314:-|nuORF;nc|ENSG00000103126|O15169-2|AXIN1	26.063383197487333	0.6669871633831898	2				NaN	NaN	0	NaN	6693	3407	10099
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10103	28.554	NaN	3209.8	30	0	349.86	0.106			+	10856	FATRPTAAA	9	57	453.24474386230565	904.4749347914113	2	453.2456359863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FATRPTAAA_	REV__ENST00000477043.5_1_10:5727032-5751560:+|nuORF	32.81241826257853	0.4965981579233955	2				NaN	NaN	0	NaN	6694	3407	10099
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10104	28.556	NaN	3644.9	30	0	590.48	0.106	+			38609	SSGQAVFLK	9	64	468.76058016705144	935.5066074009029	2	468.76123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSGQAVFLK_	ENST00000544662.1_1_12:132413858-132416816:+|nuORF	98.58198989935565	0.04066992115528678	2				NaN	NaN	0	NaN	6695	3407	10099
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10105	28.558	NaN	7938.6	30	0	808.34	0.036	+			17250	HWLLCLCE	8	82	537.2483313190473	1072.4821097048946	2	537.2489624023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_HWLLC(Carbamidomethyl (C))LCE_	nc|ENSG00000160075|Q9NP77-2|SSU72	49.21078951299608	0.5991576752473486	2				NaN	NaN	0	NaN	6696	3407	10099
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10106	28.558	NaN	3880.8	30	0	661.21	0.14	+			21487	KNKKTLEF	8	61	504.29770187828814	1006.5808508233763	2	504.29779052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KNKKTLEF_	APTX|p.H292Tfs*25|1|0.18|ENSG00000137074|chr9:32974500-32974501|-/T|frameshift_variant	44.116797842482775	0.6307669463330267	2				NaN	NaN	0	NaN	6697	3407	10099
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10117	28.585	NaN	306680	30	0	73145	0.17	+			3869	ATANQIILK	9	104	486.29721532850454	970.5798777238091	2	486.2974548339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATANQIILK_	nc|ENSG00000139793|Q5VZF2-2|MBNL2	185.54966270084765	0.0007389233275946833	2				NaN	NaN	0	NaN	6705	3410	10116
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10118	28.588	NaN	13651	30	0	2816.4	0.106	+			2064	ALANVSIEK	9	85	472.7739700532171	943.5333871732342	2	472.7738952636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ALANVSIEK_	ENSG00000129083|ENST00000439561|COPB1	114.8945686534367	0.024290463251177924	2				NaN	NaN	0	NaN	6706	3410	10116
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10119	28.59	NaN	7389.2	30	0	1252	0.106				-1	SLCSVSIEK	9	75	511.7625191211561	1021.5104853091123	2	511.7629699707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SLC(Carbamidomethyl (C))SVSIEK_	ENSG00000065534|ENST00000360304|MYLK;ENST00000504946.5_1_3:123400948-123419770:-|nuORF;nc|ENSG00000065534|Q15746-11|MYLK;nc|ENSG00000065534|Q15746-2|MYLK;nc|ENSG00000065534|Q15746-3|MYLK;nc|ENSG00000065534|Q15746-4|MYLK;nc|ENSG00000065534|Q15746-5|MYLK;nc|ENSG00000065534|Q15746-6|MYLK;nc|ENSG00000065534|Q15746-7|MYLK	72.87924865735499	0.12833875048249987	2				NaN	NaN	0	NaN	6707	3410	10116
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10120	28.592	NaN	10745	30	0	724.88	0.106	+			17286	IADAAYKAM	9	82	477.24107778346405	952.4676026337281	2	477.2413024902344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IADAAYKAM_	ENSG00000176658|ENST00000318217|MYO1D	85.16082228582465	0.07850854922700509	2				NaN	NaN	0	NaN	6708	3410	10116
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10121	28.594	NaN	22099	30	0	7069.8	0.106	+			7297	DASGAKLDY	9	81	470.2246090072506	938.4346650813012	2	470.2239685058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DASGAKLDY_	BZW1|p.N285Tfs*11|2|0.26|ENSG00000082153|chr2:200818782-200818782|A/-|frameshift_variant;BZW1|p.N286*|1|0.04|ENSG00000082153|chr2:200818790-200818791|-/T|frameshift_variant;BZW1|p.S325Rfs*19|1|0.04|ENSG00000082153|chr2:200819989-200819990|-/ACAATATAGAA|frameshift_variant;ENSG00000082153|ENST00000409600|BZW1;ENST00000464483.1_1_2:201677931-201680272:+|nuORF;nc|ENSG00000082153|Q7L1Q6-2|BZW1;nc|ENSG00000082153|Q7L1Q6-3|BZW1;nc|ENSG00000082153|Q7L1Q6-4|BZW1	138.06239232086	0.011389075116295402	2				NaN	NaN	0	NaN	6709	3410	10116
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10122	28.596	NaN	11245	30	0	1769.1	0.106			+	14624	GTGNITLAAVR	11	83	536.8072707837056	1071.599988634211	2	537.8069458007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTGNITLAAVR_	REV__ENSG00000067141|ENST00000261908|NEO1;REV__ENST00000558807.1_1_15:73547133-73551321:+|nuORF;REV__nc|ENSG00000067141|Q92859-2|NEO1;REV__nc|ENSG00000067141|Q92859-3|NEO1;REV__nc|ENSG00000067141|Q92859-4|NEO1	35.15202426646627	0.6210751305041943	2				NaN	NaN	0	NaN	6710	3410	10116
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10123	28.597	NaN	3514.4	30	0	391.58	0.036	+			48232	VTCENFISK	9	75	549.2673469495376	1096.520140965875	2	549.268310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_VTC(Carbamidomethyl (C))ENFISK_	CHD6|p.I2312Sfs*13|1|0.15|ENSG00000124177|chr20:41415191-41415191|T/-|frameshift_variant;ENSG00000124177|ENST00000373233|CHD6	65.46538089061403	0.16805504838372562	2				NaN	NaN	0	NaN	6711	3410	10116
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10136	28.624	NaN	46264	30	0	10031	0.214	+			49202	VVMVNQGLTK	10	88	544.8091218077253	1087.6036906822505	2	544.8106689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVMVNQGLTK_	ENSG00000134057|ENST00000256442|CCNB1	180.09051358498644	0.001227893244234508	2				NaN	NaN	0	NaN	6721	3413	10135
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10137	28.628	NaN	13518	30	0	3870.6	0.106	+			13032	GEVPKVPVTF	10	84	536.8072707837056	1071.599988634211	2	536.809326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEVPKVPVTF_	ENSG00000196453|ENST00000247930|ZNF777;ZNF777|p.P504Rfs*5|1|0.44|ENSG00000196453|chr7:149432761-149432761|G/-|frameshift_variant	36.446750945000026	0.5818864909973037	2				NaN	NaN	0	NaN	6722	3413	10135
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10138	28.629	NaN	11171	30	0	4425.3	0.106	+			37608	SLPSRAAAL	9	71	443.26071209007745	884.5068712469549	2	443.2608337402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLPSRAAAL_	ENSG00000105397|ENST00000525621|TYK2	54.776311868738084	0.25715957988447635	2				NaN	NaN	0	NaN	6723	3413	10135
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10139	28.631	NaN	9540.7	30	0	781.21	0.106			+	25674	LRETAGSAKP	10	74	515.2879587708785	NaN	0	515.2882080078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LRETAGSAKP_	REV__AP5Z1|p.Q696Rfs*6|3|0.43|ENSG00000242802|chr7:4790814-4790814|C/-|frameshift_variant;REV__ENSG00000242802|ENST00000649063|AP5Z1;REV__ENST00000477454.1_1_7:4827252-4828627:+|nuORF;REV__ENST00000477680.5_1_7:4815294-4829561:+|nuORF;REV__ENST00000496303.5_1_7:4815289-4829878:+|nuORF;REV__nc|ENSG00000242802|O43299-2|AP5Z1;REV__nc|ENSG00000242802|O43299-3|AP5Z1	42.86426827375447	0.3507156137006061	2				NaN	NaN	0	NaN	6724	3413	10135
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10140	28.633	NaN	5023.1	30	0	456.93	0.106			+	23686	LASSQARP	8	68	415.22939254659127	828.4442321599826	2	415.2297058105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LASSQARP_	REV__ENST00000215829.7_1_22:24951687-24951834:+|nuORF	49.44154591367651	0.597725784090933	2				NaN	NaN	0	NaN	6725	3413	10135
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10141	28.635	NaN	3586.9	30	0	311.01	0.035	+			953	AEIYGVTHT	9	67	495.7475969004811	989.4806408677622	2	495.74774169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEIYGVTHT_	ENSG00000076924|ENST00000358368|XAB2;ENST00000595288.5_1_19:7685297-7685959:-|nuORF;ENST00000600230.1_1_19:7685297-7686162:-|nuORF	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	6726	3413	10135
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10142	28.635	NaN	1814.4	30	0	248.85	0.143	+			34398	RTSGSVYITLK	11	64	612.8508576846407	1223.6871624360813	2	612.8516235351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RTSGSVYITLK_	ENSG00000140319|ENST00000267884|SRP14;ENST00000558243.1_1_15:40330963-40331317:-|nuORF;ENST00000558527.5_1_15:40329525-40331317:-|nuORF;ENST00000559475.5_1_15:40329218-40331146:-|nuORF	68.62578634547417	0.24719609611953774	2				NaN	NaN	0	NaN	6727	3413	10135
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10155	28.665	NaN	38419	30	0	7963.2	0.172	+			6231	AVSAVVHEY	9	90	487.75055093664326	973.4865489400865	2	487.7507019042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVSAVVHEY_	ENSG00000057252|ENST00000367619|SOAT1;nc|ENSG00000057252|P35610-2|SOAT1;nc|ENSG00000057252|P35610-3|SOAT1	93.19546047674547	0.05585629608842056	2				NaN	NaN	0	NaN	6737	3416	10154
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10156	28.668	NaN	16674	30	0	1845.7	0.106	+			27970	MVLPKQAPM	9	82	515.7742346317762	1029.5339163303522	2	515.7742919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_MVLPKQAPM(Oxidation (M))_	ENST00000393784.7_1_5:172378203-172378416:+|nuORF	68.484700416344	0.1473408039581241	2				NaN	NaN	0	NaN	6738	3416	10154
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10157	28.669	NaN	7334.5	30	0	1021.6	0.106	+			27565	MPFKKGAAF	9	76	498.77084245664685	995.5271319800937	2	498.7721252441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MPFKKGAAF_	ENSG00000171747|ENST00000307751|LGALS4	53.351449002276354	0.2690372970092375	2				NaN	NaN	0	NaN	6739	3416	10154
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10158	28.671	NaN	8884.3	30	0	5706.7	0.106				-1	SVWSQKIC	8	49	336.5038488846911	1006.4897172542733	3	336.5040283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_SVWSQKIC(Carbamidomethyl (C))_	ENST00000402551.5_1_19:49309936-49311037:-|nuORF;ENST00000595376.1_1_19:49309936-49310389:-|nuORF	30.503639358989545	0.7238069182250283	2				NaN	NaN	0	NaN	6740	3416	10154
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10159	28.673	NaN	6080	30	0	1241.5	0.106	+			18372	IQSTVMLDK	9	66	517.780557332148	1033.5465617310958	2	517.7813110351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IQSTVMLDK_	ENSG00000115415|ENST00000361099|STAT1;nc|ENSG00000115415|P42224-2|STAT1;STAT1|p.D534Mfs*14|1|0.24|ENSG00000115415|chr2:190980653-190980653|G/-|frameshift_variant;STAT1|p.K567Nfs*25|2|0.2|ENSG00000115415|chr2:190979798-190979798|T/-|frameshift_variant	101.45984612302182	0.0377122763612125	2				NaN	NaN	0	NaN	6741	3416	10154
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10160	28.675	NaN	3367.5	30	0	950.52	0.106				-1	 	0	58	381.69996078586024	761.3853686385205	2	381.7001037597656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6742	3416	10154
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10161	28.677	NaN	3451.9	30	0	318.14	0.034			+	-1	LGCLLLSW	8	60	481.26333358068354	NaN	0	481.2636413574219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_LGC(Carbamidomethyl (C))LLLSW_	REV__ENSG00000115598|ENST00000264257|IL1RL2	42.47446043378293	1.7418937515398478	2				NaN	NaN	0	NaN	6743	3416	10154
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10178	28.712	NaN	36116	30	0	11061	0.214				-1	 	0	61	392.7551763090164	783.4957996848328	2	392.7555236816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6757	3419	10177
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10179	28.716	NaN	21647	30	0	3369.3	0.106	+			49550	VYASDRATF	9	83	515.2522939386732	1028.4900349441464	2	515.2537841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYASDRATF_	ENSG00000198721|ENST00000380118|ECI2;ENST00000380120.6_1_6:4116110-4130812:-|nuORF;ENST00000464057.5_1_6:4116110-4125894:-|nuORF;ENST00000464583.5_1_6:4119386-4125894:-|nuORF;ENST00000496241.6_1_6:4116110-4130478:-|nuORF;nc|ENSG00000198721|O75521-2|ECI2	88.17693792209575	0.07000514020414955	2				NaN	NaN	0	NaN	6758	3419	10177
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10180	28.718	NaN	11784	30	0	1592.2	0.106				-1	PCMLSLKR	8	79	502.7725475187928	1003.5305421043856	2	503.2734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_PC(Carbamidomethyl (C))MLSLKR_	ENST00000462034.1_1_2:219103485-219104148:+|nuORF	60.29395666154354	0.49887135096048313	2				NaN	NaN	0	NaN	6759	3419	10177
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10181	28.719	NaN	8121.3	30	0	1822.2	0.106	+			16615	HGTVVALRY	9	77	508.2875093867552	1014.5604658403104	2	508.28790283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HGTVVALRY_	ENSG00000110013|ENST00000263593|SIAE;nc|ENSG00000110013|Q9HAT2-2|SIAE	104.74654710444128	0.034358562718640136	2				NaN	NaN	0	NaN	6760	3419	10177
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10182	28.721	NaN	8550.9	30	0	798.03	0.106	+			3223	ASLADIMAK	9	75	468.24730308613	934.48005323906	2	468.24676513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_ASLADIM(Oxidation (M))AK_	ENSG00000114391|ENST00000394077|RPL24;ENST00000446071.1_1_9:72832122-72832404:+|nuORF	80.45461616416974	0.09558281504443908	2				NaN	NaN	0	NaN	6761	3419	10177
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10183	28.723	NaN	5356.2	30	0	617.18	0.036	+			16385	HENIVIAKM	9	68	527.7885485913375	1053.562544249475	2	527.7897338867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HENIVIAKM_	ENSG00000185624|ENST00000331483|P4HB	70.8162118820467	0.13725933411854815	2				NaN	NaN	0	NaN	6762	3419	10177
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10184	28.724	NaN	77326	30	0	17382	0.139				-1	 	0	92	458.77604903694777	915.5375451406956	2	458.7766418457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6763	3419	10177
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10196	28.751	NaN	15519	30	0	6442.4	0.214				-1	 	0	69	480.27351160238027	958.5324702715606	2	480.2736511230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6772	3422	10195
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10197	28.755	NaN	6683.2	30	0	2322.9	0.106	+			5321	ATVLYIVKK	9	40	345.55826406758445	1033.6529628029534	3	345.55841064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATVLYIVKK_	ENSG00000113734|ENST00000351486|BNIP1;nc|ENSG00000113734|Q12981-1|BNIP1;nc|ENSG00000113734|Q12981-2|BNIP1;nc|ENSG00000113734|Q12981-3|BNIP1	54.776311868738084	0.25715957988447635	2				NaN	NaN	0	NaN	6773	3422	10195
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10198	28.757	NaN	10034	30	0	1626	0.106			+	45290	TVRMEKEVL	9	70	368.87412255024793	NaN	0	368.8741455078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVRMEKEVL_	REV__DYNC1H1|p.F2635Lfs*67|1|0.16|ENSG00000197102|chr14:102017141-102017141|T/-|frameshift_variant;REV__DYNC1H1|p.G1902Vfs*27|2|0.27|ENSG00000197102|chr14:102006154-102006154|G/-|frameshift_variant;REV__DYNC1H1|p.K3112Hfs*3|1|0.31|ENSG00000197102|chr14:102027998-102027999|-/TCACAAG|frameshift_variant;REV__DYNC1H1|p.W4201Gfs*43|1|0.42|ENSG00000197102|chr14:102043958-102043958|G/-|frameshift_variant;REV__ENSG00000197102|ENST00000360184|DYNC1H1	54.776311868738084	0.17377682019723872	2				NaN	NaN	0	NaN	6774	3422	10195
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10199	28.758	NaN	5014.4	30	0	1694.8	0.106	+			46823	VIDQDMATRLK	11	62	430.56695648069274	1288.6790400422783	3	430.56744384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VIDQDMATRLK_	ENSG00000096696|ENST00000379802|DSP;nc|ENSG00000096696|P15924-2|DSP;nc|ENSG00000096696|P15924-3|DSP	43.650786325866115	0.5079891456189096	2				NaN	NaN	0	NaN	6775	3422	10195
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10200	28.76	NaN	3290.3	30	0	1076.1	0.106			+	16926	HPLSRYSLP	9	64	535.2926579618946	1068.5707629905892	2	535.29345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HPLSRYSLP_	REV__ENSG00000185513|ENST00000418998|L3MBTL1;REV__nc|ENSG00000185513|Q9Y468-1|L3MBTL1;REV__nc|ENSG00000185513|Q9Y468-2|L3MBTL1;REV__nc|ENSG00000185513|Q9Y468-3|L3MBTL1;REV__nc|ENSG00000185513|Q9Y468-4|L3MBTL1;REV__nc|ENSG00000185513|Q9Y468|L3MBTL1	31.634271133179894	0.507608568980346	2				NaN	NaN	0	NaN	6776	3422	10195
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10201	28.762	NaN	3820.2	30	0	327.25	0.034			+	30312	PTPIQSPW	8	69	463.24340347522747	924.472254017255	2	463.243896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PTPIQSPW_	REV__APC|p.R2801W|1|0.07|ENSG00000134982|chr5:112843995-112843995|C/T|missense_variant	40.77816245573522	0.6514838689002179	2				NaN	NaN	0	NaN	6777	3422	10195
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10202	28.763	NaN	5743.3	30	0	527.43	0.143	+			33693	RPDEKAIMTY	10	77	612.3079947207896	1222.601436508379	2	612.3079833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RPDEKAIMTY_	ENSG00000072110|ENST00000394419|ACTN1;ENSG00000130402|ENST00000252699|ACTN4;ENST00000554508.5_1_14:69367621-69387744:-|nuORF;ENST00000588618.5_1_19:39138385-39212431:+|nuORF;nc|ENSG00000072110|P12814-2|ACTN1;nc|ENSG00000072110|P12814-4|ACTN1;nc|ENSG00000072110|P12814|ACTN1	84.81729255234993	0.1607459278640679	2				NaN	NaN	0	NaN	6778	3422	10195
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10214	28.79	NaN	6268.2	30	0	1066.5	0.214	+			28192	NASKGIYAM	9	69	477.738923712375	953.4632944915501	2	477.7391662597656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NASKGIYAM_	ENSG00000142945|ENST00000372224|KIF2C;nc|ENSG00000142945|Q99661-2|KIF2C	93.1432384553994	0.056003526918089595	2				NaN	NaN	0	NaN	6787	3425	10213
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10215	28.794	NaN	4151.1	30	0	383.93	0.106				-1	 	0	68	490.25275311842296	978.4909533036459	2	490.2532043457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6788	3425	10213
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10216	28.796	NaN	5057.6	30	0	1977.3	0.106	+			30914	QELEAENRL	9	73	551.2792305252685	1100.543908117337	2	551.2806396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QELEAENRL_	ENST00000487284.2_1_7:101917466-101926379:+|nuORF;ENST00000558836.5_1_7:101575863-101926379:+|nuORF;ENST00000560541.5_1_7:101556607-101926379:+|nuORF;nc|ENSG00000257923|P39880-9|CUX1;nc|ENSG00000257923|Q13948-10|CUX1;nc|ENSG00000257923|Q13948-2|CUX1;nc|ENSG00000257923|Q13948-9|CUX1;nc|ENSG00000257923|Q13948|CUX1	99.01295224348159	0.040209060045561164	2				NaN	NaN	0	NaN	6789	3425	10213
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10217	28.797	NaN	3632.7	30	0	546.79	0.106			+	17894	IGEEVAKK	8	68	437.25511593581916	872.4956789384383	2	437.2555847167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IGEEVAKK_	REV__tr|U7SNB1|U7SNB1_FUSNURNApolymerasesigmafactorSigAOS=FusobacteriumnucleatumCTI-5OX=1316586GN=sigAPE=3SV=1	65.80317337860623	0.44433089765398776	2				NaN	NaN	0	NaN	6790	3425	10213
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10218	28.799	NaN	3308.3	30	0	334.44	0.106	+			21738	KQLVEPLQL	9	63	534.3259947304002	1066.6374365276004	2	534.3271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KQLVEPLQL_	ENST00000311127.8_1_3:124688512-124688782:-|nuORF	60.97194046774394	0.20551255781574032	2				NaN	NaN	0	NaN	6791	3425	10213
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10219	28.801	NaN	2369.8	30	0	894.89	0.106				-1	 	0	49	440.72025574234095	879.4259585514819	2	440.7209777832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6792	3425	10213
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10220	28.803	NaN	3499.3	30	0	1142.4	0.031				-1	 	0	50	365.21190133494457	728.4092497366892	2	365.2120361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6793	3425	10213
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10231	28.828	NaN	5288.2	30	0	254.46	0.214	+			49203	VVMVNQGLTK	10	73	544.8091218077253	1087.6036906822505	2	545.3074340820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVMVNQGLTK_	ENSG00000134057|ENST00000256442|CCNB1	41.080066990542036	0.5391928043837881	2				NaN	NaN	0	NaN	6801	3428	10230
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10232	28.832	NaN	7596.3	30	0	508.74	0.106				-1	 	0	77	519.2480939514581	1036.4816349697162	2	519.248779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6802	3428	10230
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10233	28.834	NaN	2765.7	30	0	587.41	0.106	+			32418	QVGTVGVPL	9	55	435.2576356205995	868.500718307999	2	435.25775146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QVGTVGVPL_	ENST00000457270.5_1_22:22311488-22312070:-|nuORF	26.69291269510374	0.5537881896960711	2				NaN	NaN	0	NaN	6803	3428	10230
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10234	28.835	NaN	2932.9	30	0	354.87	0.106	+			16609	HGPGPVGAL	9	53	402.72136588624	803.42817883928	2	402.7217102050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HGPGPVGAL_	ENSG00000170291|ENST00000396628|ELP5;nc|ENSG00000170291|Q8TE02-1|ELP5;nc|ENSG00000170291|Q8TE02-2|ELP5	39.021493756699265	0.43173687394350213	2				NaN	NaN	0	NaN	6804	3428	10230
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10235	28.837	NaN	4774.5	30	0	574.55	0.106	+			51083	YLQNYTNT	8	80	508.73817467272414	1015.4617964122483	2	509.2400817871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YLQNYTNT_	CDC27|p.I404Sfs*15|1|0.44|ENSG00000004897|chr17:47142397-47142397|T/-|frameshift_variant;CDC27|p.P360Lfs*7|1|0.33|ENSG00000004897|chr17:47143976-47143977|-/AATTTAAA|frameshift_variant;ENSG00000004897|ENST00000066544|CDC27;ENST00000525495.6_2_17:45219385-45266538:-|nuORF;ENST00000533415.5_1_17:45198303-45266605:-|nuORF;nc|ENSG00000004897|P30260-2|CDC27	37.15910966729921	0.6739408393984688	2				NaN	NaN	0	NaN	6805	3428	10230
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10236	28.839	NaN	2665.9	30	0	350.36	0.035	+			7664	DLAKASPKR	9	66	493.29236041344666	984.5701678936933	2	493.2928771972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DLAKASPKR_	ENSG00000132613|ENST00000338779|MTSS2	40.05817265558897	0.419577045485086	2				NaN	NaN	0	NaN	6806	3428	10230
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10237	28.84	NaN	3725.5	30	0	1234.1	0.144			+	47149	VLRHQTSWV	9	47	375.87636028172335	1124.6072514453701	3	375.876708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VLRHQTSWV_	REV__ENST00000563188.5_1_16:23672513-23672600:+|nuORF	25.57405402267927	0.5642445186134241	2				NaN	NaN	0	NaN	6807	3428	10230
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10249	28.867	NaN	10163	30	0	2249.2	0.214	+			1303	AESVVPARM	9	69	480.25198760036454	958.4894222675291	2	480.2520446777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AESVVPARM_	ENSG00000167508|ENST00000301012|MVD;ENST00000565149.5_1_16:88718935-88722722:-|nuORF	74.25504064058377	0.12238981753128622	2				NaN	NaN	0	NaN	6816	3431	10248
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10250	28.871	NaN	8010.3	30	0	1126.9	0.106			+	26141	LSPVVCQLV	9	72	507.78851190314015	NaN	0	507.78924560546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LSPVVC(Carbamidomethyl (C))QLV_	REV__ENSG00000170927|ENST00000371117|PKHD1;REV__nc|ENSG00000170927|P08F94-2|PKHD1;REV__PKHD1|p.H2893Pfs*2|1|0.4|ENSG00000170927|chr6:51754903-51754904|-/G|frameshift_variant	74.25504064058377	0.09106938647426577	2				NaN	NaN	0	NaN	6817	3431	10248
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10251	28.873	NaN	7220.5	30	0	663.15	0.106				-1	 	0	62	441.2447644248584	880.4749759165168	2	441.24517822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6818	3431	10248
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10252	28.874	NaN	9069.8	30	0	2296.7	0.106	+			41678	SVSDFNYSR	9	72	537.7454402589751	1073.4763275847502	2	537.7465209960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVSDFNYSR_	ENSG00000112851|ENST00000284037|ERBIN;nc|ENSG00000112851|Q96RT1-2|ERBIN;nc|ENSG00000112851|Q96RT1-3|ERBIN;nc|ENSG00000112851|Q96RT1-4|ERBIN;nc|ENSG00000112851|Q96RT1-5|ERBIN;nc|ENSG00000112851|Q96RT1-6|ERBIN;nc|ENSG00000112851|Q96RT1-7|ERBIN;nc|ENSG00000112851|Q96RT1-8|ERBIN;nc|ENSG00000112851|Q96RT1-9|ERBIN	88.17693792209575	0.07000514020414955	2				NaN	NaN	0	NaN	6819	3431	10248
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10253	28.876	NaN	2280.9	30	0	213.45	0.106	+			23291	KYMQKSLEL	9	74	570.3093619581038	1138.6041709830074	2	570.3097534179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KYMQKSLEL_	ENSG00000163728|ENST00000296015|TTC14;nc|ENSG00000163728|Q96N46-2|TTC14;TTC14|p.D534Gfs*2|1|0.04|ENSG00000163728|chr3:180609828-180609829|-/G|frameshift_variant	85.86182877749512	0.07653218437724067	2				NaN	NaN	0	NaN	6820	3431	10248
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10254	28.878	NaN	7779	30	0	1108.6	0.034	+			27792	MRVTRKPG	8	78	472.7766256977331	NaN	0	472.7793273925781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MRVTRKPG_	ALPL|p.G221Vfs*56|1|0.47|ENSG00000162551|chr1:21568112-21568112|G/-|frameshift_variant	44.116797842482775	1.7418937515398478	2				NaN	NaN	0	NaN	6821	3431	10248
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10255	28.879	NaN	2766.9	30	0	240.63	0.141			+	23833	LCVLDLQTCI	10	64	560.7902032000131	1119.5658534668262	2	560.7906494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LCVLDLQTCI_	REV__ENST00000318709.8_1_7:32624999-32625218:+|nuORF	42.86426827375447	0.522752283233888	2				NaN	NaN	0	NaN	6822	3431	10248
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10270	28.912	NaN	72413	30	0	21616	0.214	+			39004	SSSGFVAIK	9	79	448.2473838916119	894.4802148500238	2	448.24749755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSSGFVAIK_	ENSG00000198478|ENST00000369838|SH3BGRL2;SH3BGRL2|p.P55Rfs*41|2|0.28|ENSG00000198478|chr6:79673727-79673727|C/-|frameshift_variant	162.25246889848123	0.0040893836092247005	2				NaN	NaN	0	NaN	6834	3434	10269
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10271	28.916	NaN	17519	30	0	2583.3	0.106	+			42364	TAIGMPVEK	9	80	473.2569866268635	NaN	0	473.25701904296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAIGMPVEK_	ENSG00000109736|ENST00000355443|MFSD10;ENST00000509676.1_1_4:2934766-2935650:-|nuORF;MFSD10|p.S111Gfs*48|1|0.44|ENSG00000109736|chr4:2933125-2933147|GGGCGCCTCCCCAAGCAGTCAGA/-|frameshift_variant	63.53385203322761	0.134247007536971	2				NaN	NaN	0	NaN	6835	3434	10269
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10272	28.918	NaN	24512	30	0	7624.9	0.106				-1	 	0	90	451.2238112042079	900.4330694752158	2	451.22393798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6836	3434	10269
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10273	28.919	NaN	7661.1	30	0	922.9	0.106	+			43327	TGASVIRAY	9	65	469.257627289225	936.50070164525	2	469.2581481933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TGASVIRAY_	ENSG00000108846|ENST00000285238|ABCC3;ENST00000502426.5_1_17:48736553-48755440:+|nuORF;nc|ENSG00000108846|O15438-2|ABCC3;nc|ENSG00000108846|O15438-4|ABCC3	109.47833844074708	0.029530294723441826	2				NaN	NaN	0	NaN	6837	3434	10269
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10274	28.921	NaN	10143	30	0	4834.5	0.106	+			19209	KAAFSRLYQL	10	58	399.56391577676874	1195.6699179305062	3	399.5643615722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KAAFSRLYQL_	ENSG00000215193|ENST00000399744|PEX26;nc|ENSG00000215193|Q7Z412-2|PEX26	32.75053402867276	0.6123771875927935	2				NaN	NaN	0	NaN	6838	3434	10269
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10275	28.923	NaN	4487.6	30	0	514.76	0.106			+	21796	KQWELVEGH	9	70	563.2892019090988	1124.5638508849975	2	563.7962646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KQWELVEGH_	REV__ENSG00000087087|ENST00000611405|SRRT;REV__nc|ENSG00000087087|Q9BXP5-2|SRRT;REV__nc|ENSG00000087087|Q9BXP5-3|SRRT;REV__nc|ENSG00000087087|Q9BXP5-4|SRRT;REV__nc|ENSG00000087087|Q9BXP5-5|SRRT;REV__SRRT|p.F750Lfs*32|1|0.12|ENSG00000087087|chr7:100887778-100887778|T/-|frameshift_variant	49.44154591367651	0.3095138337212152	2				NaN	NaN	0	NaN	6839	3434	10269
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10276	28.925	NaN	2005.7	30	0	158.04	0.036	+			21663	KQAEKLMKQ	9	64	552.3147608129614	1102.6149686927226	2	552.3160400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KQAEKLMKQ_	ATAD1|p.G63E|1|0.25|ENSG00000138138|chr10:87792730-87792730|C/T|missense_variant;ATAD1|p.N66Mfs*2|1|0.25|ENSG00000138138|chr10:87792721-87792721|T/-|frameshift_variant;ENSG00000138138|ENST00000680024|ATAD1;nc|ENSG00000138138|Q8NBU5-2|ATAD1	60.11826168202944	0.21262886028301267	2				NaN	NaN	0	NaN	6840	3434	10269
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10288	28.95	NaN	23144	30	0	2759.5	0.214				-1	 	0	77	478.76112307164027	955.5076932100806	2	478.76123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6849	3437	10287
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10289	28.954	NaN	54591	30	0	12246	0.106	+			40278	STSQTFIYK	9	90	537.776033893004	1073.5375148528078	2	537.7772827148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STSQTFIYK_	ENSG00000004487|ENST00000400181|KDM1A;nc|ENSG00000004487|O60341|KDM1A	185.71840793949184	0.0007219834064317508	2				NaN	NaN	0	NaN	6850	3437	10287
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10290	28.956	NaN	8499.3	30	0	629.8	0.106				-1	CGYDKINKK	9	79	563.2892019090988	1124.5638508849975	2	563.7941284179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_C(Carbamidomethyl (C))GYDKINKK_	ENST00000485823.1_1_12:53279751-53279922:+|nuORF	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	6851	3437	10287
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10291	28.957	NaN	4932.6	30	0	872.37	0.106	+			25406	LPKTQNGEIV	10	71	549.8105553403748	1097.6065577475495	2	549.8119506835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LPKTQNGEIV_	DIP2B|p.A1021Cfs*11|1|0.32|ENSG00000066084|chr12:50721279-50721280|-/CTGTATGCAC|frameshift_variant;DIP2B|p.I979Afs*17|1|0.13|ENSG00000066084|chr12:50718790-50718815|AAATAGAAGAGAATGATTTGGTGAGG/-|frameshift_variant;DIP2B|p.V1240Dfs*9|1|0.05|ENSG00000066084|chr12:50731445-50731446|-/ATATTTAC|frameshift_variant;DIP2B|p.V893Gfs*91|1|0.06|ENSG00000066084|chr12:50714417-50714418|-/G|frameshift_variant;ENSG00000066084|ENST00000301180|DIP2B;ENST00000552328.1_1_12:51079642-51080480:+|nuORF	35.15202426646627	0.5927656479315102	2				NaN	NaN	0	NaN	6852	3437	10287
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10292	28.959	NaN	6084.3	30	0	1498.5	0.106	+			27324	MHPYCLPN	8	69	487.7153916198161	973.4162303064322	2	487.7156982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MHPYCLPN_	ENSG00000148840|ENST00000278070|PPRC1;nc|ENSG00000148840|Q5VV67-2|PPRC1;PPRC1|p.G704Vfs*30|1|0.2|ENSG00000148840|chr10:102140614-102140614|G/-|frameshift_variant	37.028477286268924	0.6747514403204248	2				NaN	NaN	0	NaN	6853	3437	10287
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10293	28.961	NaN	8510.9	30	0	736.23	0.033				-1	 	0	79	437.2734104013511	872.5322678695022	2	437.2735900878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6854	3437	10287
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10294	28.962	NaN	3580.7	30	0	609.72	0.139				-1	LGQWLHGL	8	67	483.2642126172808	964.5138723013616	2	483.7663879394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LGQWLHGL_	ENST00000321039.4_1_19:57966988-57967147:-|nuORF	46.76643321282427	0.6143254112625767	2				NaN	NaN	0	NaN	6855	3437	10287
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10306	28.989	NaN	37833	30	0	9561	0.214	+			40309	STSSVIMMK	9	83	492.24767639832055	982.4807998634411	2	492.2484130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STSSVIMMK_	ENST00000521804.1_1_8:142264568-142318349:-|nuORF	200.15690381979954	3.265422741743988E-05	2				NaN	NaN	0	NaN	6864	3440	10305
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10307	28.993	NaN	17140	30	0	2510.9	0.106	+			26384	LTDQVSVI	8	83	437.7473268958583	873.4801008585166	2	437.7480163574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LTDQVSVI_	ENSG00000099995|ENST00000215793|SF3A1;nc|ENSG00000099995|Q15459-2|SF3A1	96.19043198914106	0.25873003980794995	2				NaN	NaN	0	NaN	6865	3440	10305
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10308	28.994	NaN	13286	30	0	3931.3	0.106	+			4956	ATQTQFFHVK	10	67	402.87998611643525	1205.6181289495057	3	402.8802490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATQTQFFHVK_	ENSG00000163564|ENST00000368140|PYHIN1;ENSG00000163565|ENST00000295809|IFI16;ENST00000485134.1_1_1:158911778-158914889:+|nuORF;ENST00000493884.5_1_1:158984458-159022017:+|nuORF;nc|ENSG00000163564|Q6K0P9-2|PYHIN1;nc|ENSG00000163564|Q6K0P9-3|PYHIN1;nc|ENSG00000163564|Q6K0P9-4|PYHIN1;nc|ENSG00000163565|Q16666-2|IFI16;nc|ENSG00000163565|Q16666-3|IFI16;nc|ENSG00000163565|Q16666-6|IFI16;nc|ENSG00000163565|Q16666-8|IFI16	53.59686742100583	0.4240759338601513	2				NaN	NaN	0	NaN	6866	3440	10305
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10309	28.996	NaN	8499.7	30	0	1552.8	0.106			+	36863	SIFRRDTMIGT	11	69	432.8943797646004	NaN	0	432.894775390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SIFRRDTMIGT_	REV__NRXN2|p.E867D|1|0.14|ENSG00000110076|chr11:64651572-64651572|C/G|missense_variant	41.080066990542036	0.3793850210388171	2				NaN	NaN	0	NaN	6867	3440	10305
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10310	28.998	NaN	4889.6	30	0	889.89	0.106				-1	LGTGSAIPMK	10	63	495.7692673161693	989.5239816991386	2	495.7674560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_LGTGSAIPM(Oxidation (M))K_	ENSG00000006744|ENST00000338034|ELAC2;ENST00000480891.5_1_17:12896137-12909314:-|nuORF;ENST00000484122.5_1_17:12899737-12920449:-|nuORF;nc|ENSG00000006744|Q9BQ52-2|ELAC2;nc|ENSG00000006744|Q9BQ52-3|ELAC2;nc|ENSG00000006744|Q9BQ52-4|ELAC2	66.42927471994793	0.3073667423445326	2				NaN	NaN	0	NaN	6868	3440	10305
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10311	29	NaN	7814.8	30	0	2255.7	0.036	+			30786	QEAEMAQNAV	10	73	545.7444535621512	1089.4743541911023	2	545.7454223632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QEAEMAQNAV_	ENSG00000168036|ENST00000349496|CTNNB1	56.632244143249146	0.3964695498866976	2				NaN	NaN	0	NaN	6869	3440	10305
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10312	29.001	NaN	9161.2	30	0	1033.4	0.14	+			10967	FEAQGKPEL	9	69	509.76305026293534	1017.5115475926707	2	509.7640380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FEAQGKPEL_	ENSG00000088356|ENST00000202017|PDRG1	75.65223720490533	0.11634833104049533	2				NaN	NaN	0	NaN	6870	3440	10305
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10323	29.028	NaN	9975.7	30	0	2042.8	0.214				-1	 	0	69	456.7135820071157	911.4126110810314	2	456.7138977050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6878	3443	10322
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10324	29.031	NaN	8246.7	30	0	1534	0.106			+	31534	QLKYLDKS	8	69	497.7822748035057	993.5499966738114	2	497.7815856933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QLKYLDKS_	REV__ENSG00000117501|ENST00000367759|MROH9;REV__MROH9|p.L759*|1|0.19|ENSG00000117501|chr1:171025412-171025412|T/-|frameshift_variant;REV__MROH9|p.L824Cfs*10|1|0.03|ENSG00000117501|chr1:171064224-171064224|T/-|frameshift_variant;REV__nc|ENSG00000117501|Q5TGP6|MROH9	64.20726635412375	0.4601301477144759	2				NaN	NaN	0	NaN	6879	3443	10322
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10325	29.033	NaN	5899.1	30	0	2440.9	0.106	+			2760	ARIPGSRLE	9	66	499.7901135665601	997.5656741999202	2	499.7902526855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ARIPGSRLE_	ENST00000362042.7_1_17:46137462-46137492:+|nuORF	80.45461616416974	0.09558281504443908	2				NaN	NaN	0	NaN	6880	3443	10322
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10326	29.035	NaN	13738	30	0	3023.4	0.106	+			48292	VTDYGKDLMEK	11	75	433.5474539024756	1297.6205323076267	3	433.5475769042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTDYGKDLMEK_	ENSG00000158874|ENST00000367990|APOA2	55.08391021199286	0.3673379875553588	2				NaN	NaN	0	NaN	6881	3443	10322
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10327	29.037	NaN	2137.7	30	0	536.32	0.106			+	46090	VDAESILVFY	10	53	385.8691237191882	1154.5855417577648	3	385.86944580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VDAESILVFY_	REV__ENST00000606385.1_1_6:25015606-25015681:-|nuORF	29.170058357718403	0.6416167986984785	2				NaN	NaN	0	NaN	6882	3443	10322
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10328	29.039	NaN	3691.7	30	0	821.92	0.039			+	19638	KDKGSKRRPAP	11	55	413.9147258554	1238.7223481664	3	413.9147644042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KDKGSKRRPAP_	REV__ENST00000513778.1_1_4:6695618-6698766:+|nuORF	23.37791116691581	0.7445759747191538	2				NaN	NaN	0	NaN	6883	3443	10322
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10329	29.039	NaN	2663.8	30	0	279.98	0.14	+			31738	QPANPTEEY	9	71	524.73238773	1047.4502225268	2	524.7327880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QPANPTEEY_	ENSG00000152944|ENST00000282892|MED21	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	6884	3443	10322
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10341	29.067	NaN	43861	30	0	12065	0.214	+			23711	LAVDKSASL	9	94	452.2604657201522	902.5063785071044	2	452.2608642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LAVDKSASL_	ENSG00000065526|ENST00000375759|SPEN;SPEN|p.A2105Lfs*33|1|0.46|ENSG00000065526|chr1:15932548-15932548|G/-|frameshift_variant;SPEN|p.A2251Qfs*102|3|0.29|ENSG00000065526|chr1:15932985-15932985|C/-|frameshift_variant	106.68306549817024	0.032382560583716295	2				NaN	NaN	0	NaN	6893	3446	10340
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10342	29.07	NaN	17309	30	0	4626.5	0.106	+			48811	VVAFPTDSK	9	76	482.260396650299	962.506240367398	2	482.2608642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVAFPTDSK_	ENSG00000149418|ENST00000278742|ST14	75.04331003522576	0.118981335847003	2				NaN	NaN	0	NaN	6894	3446	10340
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10343	29.072	NaN	12902	30	0	2594.7	0.106	+			3288	ASLQSIIHK	9	58	332.86581356887694	995.5756113068309	3	332.8660583496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASLQSIIHK_	ENSG00000095787|ENST00000354911|WAC;nc|ENSG00000095787|Q9BTA9-2|WAC;nc|ENSG00000095787|Q9BTA9-3|WAC;nc|ENSG00000095787|Q9BTA9-5|WAC	40.77816245573522	0.41113185337114944	2				NaN	NaN	0	NaN	6895	3446	10340
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10344	29.074	NaN	18458	30	0	2519.8	0.106			+	42744	TDLLTKQL	8	81	466.27607146095403	930.5375899887081	2	466.2765197753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TDLLTKQL_	REV__CLIP1|p.M1151Wfs*8|1|0.31|ENSG00000130779|chr12:122316771-122316771|T/-|frameshift_variant;REV__ENSG00000130779|ENST00000620786|CLIP1;REV__nc|ENSG00000130779|P30622-1|CLIP1;REV__nc|ENSG00000130779|P30622-2|CLIP1	77.31757898189308	0.345924878368729	2				NaN	NaN	0	NaN	6896	3446	10340
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10345	29.076	NaN	7323.4	30	0	722.23	0.106				-1	 	0	77	474.24852412237095	473.24124765577096	1	474.2509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6897	3446	10340
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10346	29.078	NaN	4743	30	0	3515.4	0.037	+			41516	SVPSSETVICR	11	56	589.2971367637131	1176.579720594226	2	589.2984619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVPSSETVICR_	ENSG00000155090|ENST00000285407|KLF10;nc|ENSG00000155090|Q13118-2|KLF10	37.50817390946774	0.5920388381045607	2				NaN	NaN	0	NaN	6898	3446	10340
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10347	29.078	NaN	3545.2	30	0	445.75	0.141	+			13125	GGKASWRGSR	10	73	531.2849825964114	1060.5554122596227	2	532.295654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GGKASWRGSR_	ENST00000537350.5_2_1:167666745-167666832:+|nuORF	61.691277971877994	0.35045824941635534	2				NaN	NaN	0	NaN	6899	3446	10340
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10362	29.112	NaN	12820	30	0	3782.1	0.214	+			33970	RSELAATL	8	67	430.744977819457	859.475402705714	2	430.7451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RSELAATL_	CCDC170|p.F56C|1|0.17|ENSG00000120262|chr6:151536427-151536427|T/G|missense_variant;CCDC170|p.K600Sfs*26|1|0.23|ENSG00000120262|chr6:151615527-151615527|A/-|frameshift_variant;CCDC170|p.S639Ifs*34|1|0.21|ENSG00000120262|chr6:151615639-151615640|-/A|frameshift_variant;ENSG00000120262|ENST00000239374|CCDC170	76.7741389293348	0.3504530765139327	2				NaN	NaN	0	NaN	6911	3449	10361
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10363	29.115	NaN	8169.3	30	0	1070.6	0.106			+	50730	YEIIYYSV	8	73	525.262574664493	1048.5105963957858	2	525.2637329101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YEIIYYSV_	REV__PTPRS|p.V364I|1|0.12|ENSG00000105426|chr19:5244381-5244381|C/T|missense_variant	33.51558372728122	0.7005509609380386	2				NaN	NaN	0	NaN	6912	3449	10361
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10364	29.117	NaN	7039	30	0	1415	0.106			+	22086	KSLSKVGIY	9	66	497.79985889615375	993.5851648591075	2	497.8002014160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KSLSKVGIY_	REV__tr|U7T5N7|U7T5N7_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00029PE=4SV=1	76.7741389293348	0.11149722112137898	2				NaN	NaN	0	NaN	6913	3449	10361
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10365	29.119	NaN	4328.9	30	0	2151.8	0.106				-1	LVCRKRKG	8	42	339.5424874495241	1015.6056329487724	3	339.5426330566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_LVC(Carbamidomethyl (C))RKRKG_	ENSG00000183207|ENST00000595090|RUVBL2;ENST00000596247.5_1_19:49507512-49519096:+|nuORF;nc|ENSG00000183207|Q9Y230-2|RUVBL2	31.954861631926434	0.7126016770032289	2				NaN	NaN	0	NaN	6914	3449	10361
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10366	29.121	NaN	4737	30	0	698.56	0.106	+			25574	LQENPSTP	8	65	443.21887258167305	884.4231922301461	2	443.21905517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LQENPSTP_	ENSG00000149930|ENST00000308893|TAOK2;nc|ENSG00000149930|Q9UL54-2|TAOK2;nc|ENSG00000149930|Q9UL54-3|TAOK2;nc|ENSG00000149930|Q9UL54-4|TAOK2;TAOK2|p.G983Vfs*50|1|0.43|ENSG00000149930|chr16:29987216-29987216|G/-|frameshift_variant	49.44154591367651	0.597725784090933	2				NaN	NaN	0	NaN	6915	3449	10361
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10367	29.123	NaN	4196.4	30	0	390.04	0.035			+	22424	KTKVDARVQ	9	72	522.8108049109571	1043.6070568887142	2	522.8118286132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KTKVDARVQ_	REV__ENSG00000168487|ENST00000306385|BMP1;REV__ENST00000354870.5_1_8:22035226-22069238:+|nuORF;REV__ENST00000520626.5_1_8:22059101-22069238:+|nuORF;REV__ENST00000520970.5_1_8:22058712-22069238:+|nuORF;REV__ENST00000520982.5_1_8:22034120-22069238:+|nuORF	40.77816245573522	0.41113185337114944	2				NaN	NaN	0	NaN	6916	3449	10361
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10368	29.123	NaN	5724.8	30	0	779.18	0.14	+			37044	SIRTFVPKN	9	68	531.3078608774814	1060.6011688217627	2	531.3093872070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SIRTFVPKN_	ENSG00000037474|ENST00000264670|NSUN2;ENST00000513888.5_1_5:6600041-6604993:-|nuORF;nc|ENSG00000037474|Q08J23-2|NSUN2;nc|ENSG00000037474|Q08J23-3|NSUN2	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	6917	3449	10361
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10380	29.151	NaN	37233	30	0	4352.1	0.214	+			41374	SVMGVTVSR	9	79	468.25214100021697	934.489729067234	2	468.2523498535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVMGVTVSR_	DIP2B|p.A1021Cfs*11|1|0.32|ENSG00000066084|chr12:50721279-50721280|-/CTGTATGCAC|frameshift_variant;DIP2B|p.I979Afs*17|1|0.13|ENSG00000066084|chr12:50718790-50718815|AAATAGAAGAGAATGATTTGGTGAGG/-|frameshift_variant;DIP2B|p.V1240Dfs*9|1|0.05|ENSG00000066084|chr12:50731445-50731446|-/ATATTTAC|frameshift_variant;DIP2B|p.V893Gfs*91|1|0.06|ENSG00000066084|chr12:50714417-50714418|-/G|frameshift_variant;ENSG00000066084|ENST00000301180|DIP2B	131.61620852596164	0.014413238321579053	2				NaN	NaN	0	NaN	6926	3452	10379
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10381	29.154	NaN	11146	30	0	1023.5	0.106			+	22416	KTKLGKFTQ	9	79	525.8182471386135	1049.621941344027	2	525.819091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTKLGKFTQ_	REV__ENSG00000275052|ENST00000616407|PPP4R3B;REV__nc|ENSG00000275052|Q5MIZ7-2|PPP4R3B;REV__nc|ENSG00000275052|Q5MIZ7-3|PPP4R3B;REV__nc|ENSG00000275052|Q5MIZ7-5|PPP4R3B	99.01295224348159	0.040209060045561164	2				NaN	NaN	0	NaN	6927	3452	10379
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10382	29.156	NaN	10177	30	0	2169	0.106			+	6833	CIASLSRF	8	72	448.73774213450423	895.4609313358085	2	449.23724365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_CIASLSRF_	REV__ENST00000571658.2_2_17:45009367-45009658:+|nuORF	46.76643321282427	0.6143254112625767	2				NaN	NaN	0	NaN	6928	3452	10379
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10383	29.158	NaN	13723	30	0	5463.6	0.106				-1	AEISARTMQSK	11	83	413.21147626091556	1236.6125993829467	3	413.2117614746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_AEISARTM(Oxidation (M))QSK_	ENSG00000153707|ENST00000381196|PTPRD;nc|ENSG00000153707|P23468-2|PTPRD;nc|ENSG00000153707|P23468-3|PTPRD	35.17822180527639	0.6208003396870814	2				NaN	NaN	0	NaN	6929	3452	10379
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10384	29.16	NaN	6896.3	30	0	1404.1	0.106	+			29229	NVYEVVNPK	9	67	531.2849825964114	1060.5554122596227	2	531.28515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NVYEVVNPK_	ENSG00000139117|ENST00000331366|CPNE8	104.01359247289065	0.03510646158778409	2				NaN	NaN	0	NaN	6930	3452	10379
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10385	29.162	NaN	5356.6	30	0	630.41	0.035	+			49252	VVNSQTLLH	9	75	505.78452953609934	1009.5545061389987	2	505.7853088378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VVNSQTLLH_	ARID2|p.N1778Ifs*13|1|0.15|ENSG00000189079|chr12:45893686-45893686|A/-|frameshift_variant;ARID2|p.P851Hfs*4|1|0.36|ENSG00000189079|chr12:45850671-45850671|C/-|frameshift_variant;ENSG00000189079|ENST00000334344|ARID2;nc|ENSG00000189079|Q68CP9-3|ARID2	71.87747018426188	0.13267044672804276	2				NaN	NaN	0	NaN	6931	3452	10379
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10386	29.162	NaN	4797.5	30	0	560.41	0.139	+			5853	AVIQALAQK	9	63	471.2917729648316	940.5689929964632	2	471.29193115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AVIQALAQK_	CAMSAP2|p.K1052Rfs*43|1|0.32|ENSG00000118200|chr1:200849887-200849887|A/-|frameshift_variant;CAMSAP2|p.M1437*|7|0.32|ENSG00000118200|chr1:200857892-200857892|A/-|frameshift_variant;ENSG00000118200|ENST00000358823|CAMSAP2;nc|ENSG00000118200|Q08AD1-2|CAMSAP2;nc|ENSG00000118200|Q08AD1|CAMSAP2	87.75429964447693	0.0711966946989736	2				NaN	NaN	0	NaN	6932	3452	10379
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10398	29.19	NaN	193610	30	0	55358	0.195			+	23828	LCTGRESGN	9	103	468.7136365192429	935.4127201052859	2	468.7138366699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LCTGRESGN_	REV__ENSG00000147223|ENST00000276173|RIPPLY1	56.72105179125745	0.24094814563026265	2				NaN	NaN	0	NaN	6941	3455	10397
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10399	29.193	NaN	54154	30	0	21078	0.106				-1	 	0	88	458.2420404212926	914.4695279093852	2	458.24249267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6942	3455	10397
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10400	29.195	NaN	14507	30	0	1145.7	0.106	+			16102	HDGLHVASL	9	86	474.7493349570326	NaN	0	474.7486877441406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HDGLHVASL_	ENSG00000109046|ENST00000262394|WSB1;ENST00000467843.6_1_17:25636020-25639392:+|nuORF;nc|ENSG00000109046|Q9Y6I7-2|WSB1;nc|ENSG00000109046|Q9Y6I7-4|WSB1	66.42927471994793	0.121898005645852	2				NaN	NaN	0	NaN	6943	3455	10397
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10401	29.197	NaN	15814	30	0	6946.3	0.106	+			30905	QEKVSDYEM	9	69	564.7465295950232	1127.4785062568462	2	564.747802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QEKVSDYEM_	ENSG00000132646|ENST00000379143|PCNA	162.25246889848123	0.0040893836092247005	2				NaN	NaN	0	NaN	6944	3455	10397
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10402	29.198	NaN	24224	30	0	6015.9	0.106	+			44817	TTSNFTFSK	9	75	516.7527366648534	1031.4909203965067	2	516.753662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TTSNFTFSK_	ENSG00000160294|ENST00000291688|MCM3AP;MCM3AP|p.K492Efs*5|1|0.29|ENSG00000160294|chr21:46280545-46280546|-/C|frameshift_variant	133.9934435666947	0.013297982075521412	2				NaN	NaN	0	NaN	6945	3455	10397
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10403	29.2	NaN	3857.1	30	0	389.91	0.106			+	34071	RSPLTPAPGPP	11	69	545.3070692775885	1088.599585621977	2	545.3078002929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RSPLTPAPGPP_	REV__ENSG00000266714|ENST00000645453|MYO15B	42.396135135203025	0.5251566046092361	2				NaN	NaN	0	NaN	6946	3455	10397
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10404	29.202	NaN	5318.2	30	0	780.38	0.035	+			47330	VPASLTTKY	9	82	490.2757638307427	978.5369747282854	2	490.2763366699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VPASLTTKY_	ENSG00000118900|ENST00000262376|UBN1;ENSG00000157741|ENST00000473989|UBN2;nc|ENSG00000118900|Q9NPG3-2|UBN1;nc|ENSG00000157741|Q6ZU65-2|UBN2;UBN1|p.R716Gfs*129|1|0.3|ENSG00000118900|chr16:4874551-4874551|A/-|frameshift_variant;UBN2|p.G1191Efs*28|1|0.17|ENSG00000157741|chr7:139284473-139284473|G/-|frameshift_variant;UBN2|p.K314Rfs*11|1|0.15|ENSG00000157741|chr7:139261281-139261281|A/-|frameshift_variant;UBN2|p.K315Efs*5|1|0.25|ENSG00000157741|chr7:139261280-139261281|-/A|frameshift_variant;UBN2|p.K542Nfs*2|1|0.14|ENSG00000157741|chr7:139272347-139272347|A/-|frameshift_variant;UBN2|p.L543Tfs*6|1|0.38|ENSG00000157741|chr7:139272346-139272347|-/A|frameshift_variant;UBN2|p.S988Hfs*27|1|0.18|ENSG00000157741|chr7:139283862-139283862|C/-|frameshift_variant	56.43379154798735	0.2433427591689151	2				NaN	NaN	0	NaN	6947	3455	10397
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10416	29.228	NaN	17321	30	0	5280.7	0.214			+	2784	ARQTNHVA	8	83	448.73774213450423	895.4609313358085	2	448.73956298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ARQTNHVA_	REV__ENSG00000229474|ENST00000682850|PATL2;REV__PATL2|p.L77P|1|0.26|ENSG00000229474|chr15:44674223-44674223|A/G|missense_variant	44.116797842482775	0.6307669463330267	2				NaN	NaN	0	NaN	6956	3458	10415
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10417	29.231	NaN	4784.2	30	0	420.24	0.106			+	-1	KFSEKLRC	8	65	534.285940223981	1066.557327514762	2	534.2874145507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_KFSEKLRC(Carbamidomethyl (C))_	REV__ENST00000274056.11_1_4:164446528-164446588:-|nuORF	55.50420428727701	0.5462892107279674	2				NaN	NaN	0	NaN	6957	3458	10415
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10418	29.233	NaN	11344	30	0	2190.9	0.106			+	18270	IPGRARHPGL	10	73	537.3204487002766	1072.6263444673532	2	537.3212280273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IPGRARHPGL_	REV__HSF4|p.S253G|1|0.14|ENSG00000102878|chr16:67167502-67167502|A/G|missense_variant	52.936696900407355	0.4300801048568001	2				NaN	NaN	0	NaN	6958	3458	10415
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10419	29.235	NaN	6156.8	30	0	906.6	0.106				-1	 	0	68	474.24852412237095	473.24124765577096	1	475.2450256347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6959	3458	10415
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10420	29.237	NaN	3448.4	30	0	616.23	0.106			+	46999	VKSRFPEPF	9	51	369.53747265959726	1105.5905885789919	3	369.5377197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VKSRFPEPF_	REV__ENSG00000173599|ENST00000393960|PC	32.81241826257853	0.4965981579233955	2				NaN	NaN	0	NaN	6960	3458	10415
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10421	29.239	NaN	2443.7	30	0	205.22	0.035				-1	 	0	61	506.2424039028495	505.2351274362495	1	506.2429504394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6961	3458	10415
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10422	29.239	NaN	6893.6	30	0	1070.9	0.141	+			43253	TEYETQVKV	9	76	548.7787222557195	1095.5428915782388	2	548.7800903320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TEYETQVKV_	ENSG00000120948|ENST00000240185|TARDBP;nc|ENSG00000120948|Q13148-4|TARDBP	132.757866228626	0.013877640931359021	2				NaN	NaN	0	NaN	6962	3458	10415
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10433	29.266	NaN	9926.8	30	0	1552.5	0.214	+			23984	LDVSGPKV	8	72	407.7372761223212	813.4599993114424	2	407.7369384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LDVSGPKV_	AHNAK|p.A4215V|1|0.31|ENSG00000124942|chr11:62521773-62521773|G/A|missense_variant;AHNAK|p.I4226V|1|0.1|ENSG00000124942|chr11:62521741-62521741|T/C|missense_variant;AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK;ENSG00000124942|ENST00000378024|AHNAK;ENSG00000124942|ENST00000378024|AHNAK;ENSG00000124942|ENST00000378024|AHNAK;ENSG00000124942|ENST00000378024|AHNAK	101.60071028292904	0.24979566554663588	2				NaN	NaN	0	NaN	6970	3461	10432
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10434	29.27	NaN	6018.4	30	0	525.58	0.106	+			30555	QALLVLHAQ	9	76	496.7971433678229	991.5797338024458	2	496.7976989746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QALLVLHAQ_	PAK4|p.S429L|1|0.38|ENSG00000130669|chr19:39175365-39175365|C/T|missense_variant	90.77665401227738	0.06267569666681755	2				NaN	NaN	0	NaN	6971	3461	10432
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10435	29.272	NaN	5165.5	30	0	711.01	0.106	+			48133	VSVQCKPL	8	65	465.7568606887368	929.4991684442737	2	465.7572937011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_VSVQC(Carbamidomethyl (C))KPL_	ENSG00000117983|ENST00000529681|MUC5B	47.91560031466742	0.6071945918984287	2				NaN	NaN	0	NaN	6972	3461	10432
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10436	29.274	NaN	4339.8	30	0	676.56	0.106	+			42897	TEHINIHQL	9	73	552.7924320689344	1103.5703112046688	2	552.7931518554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TEHINIHQL_	ENSG00000180353|ENST00000314583|HCLS1;ENST00000481314.5_1_3:121363541-121379717:-|nuORF;ENST00000487290.5_1_3:121363549-121379717:-|nuORF;nc|ENSG00000180353|P14317-2|HCLS1	60.11826168202944	0.21262886028301267	2				NaN	NaN	0	NaN	6973	3461	10432
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10437	29.276	NaN	3275.8	30	0	819.44	0.106				-1	 	0	69	501.23350684366477	1000.4524607541296	2	501.23419189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6974	3461	10432
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10438	29.277	NaN	4560.4	30	0	1307.6	0.106	+			17610	IEGVTHAL	8	49	420.2339765311249	838.4534001290498	2	420.2342224121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IEGVTHAL_	ENSG00000136628|ENST00000366923|EPRS1	73.97473282117947	0.3737790450121076	2				NaN	NaN	0	NaN	6975	3461	10432
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10439	29.279	NaN	3049	30	0	986.17	0.035	+			38396	SRYDLLIK	8	61	504.29770187828814	1006.5808508233763	2	504.2979736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SRYDLLIK_	RYR1|p.G1978D|1|0.11|ENSG00000196218|chr19:38490194-38490194|G/A|missense_variant	44.116797842482775	0.6307669463330267	2				NaN	NaN	0	NaN	6976	3461	10432
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10452	29.307	NaN	295290	30	0	135070	0.206				-1	 	0	116	387.5168086052639	1159.5285964159918	3	387.5171203613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6986	3464	10451
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10453	29.31	NaN	19262	30	0	2094.1	0.106				-1	 	0	86	478.76112307164027	955.5076932100806	2	478.7613830566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6987	3464	10451
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10454	29.312	NaN	13154	30	0	1983.3	0.106				-1	 	0	76	529.813059150621	1057.611565368042	2	529.814208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6988	3464	10451
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10455	29.314	NaN	4682.5	30	0	542.12	0.106	+			47753	VSGPSGLAGWG	11	69	494.24812539579307	NaN	0	494.24798583984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSGPSGLAGWG_	ENST00000486045.1_1_16:109134-109779:-|nuORF	31.529811441608018	0.4249010005043958	2				NaN	NaN	0	NaN	6989	3464	10451
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10456	29.316	NaN	3272.4	30	0	2467.5	0.106				-1	 	0	28	329.2195798924985	656.424606851797	2	329.21942138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6990	3464	10451
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10457	29.317	NaN	5547.6	30	0	1320.8	0.106	+			1241	AERLGQFMTLA	11	65	412.88653552925734	NaN	0	412.8865661621094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AERLGQFMTLA_	ENSG00000113739|ENST00000265087|STC2	33.03940026070387	0.41817340257782254	2				NaN	NaN	0	NaN	6991	3464	10451
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10458	29.319	NaN	5281.5	30	0	1543.7	0.035	+			49801	VYSPKSPSL	9	68	489.26844079200964	976.5223286508193	2	489.2686462402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VYSPKSPSL_	ENSG00000102858|ENST00000262370|MGRN1;nc|ENSG00000102858|O60291-3|MGRN1;nc|ENSG00000102858|O60291-4|MGRN1;nc|ENSG00000102858|O60291|MGRN1	53.08895987439943	0.27122541748218487	2				NaN	NaN	0	NaN	6992	3464	10451
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10470	29.344	NaN	17085	30	0	7957.5	0.214	+			32398	QVDPNFYSK	9	82	549.266507528773	1096.518462124346	2	549.2676391601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QVDPNFYSK_	ENSG00000176623|ENST00000406452|RMDN1;nc|ENSG00000176623|Q96DB5-2|RMDN1	70.8162118820467	0.13725933411854815	2				NaN	NaN	0	NaN	7001	3467	10469
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10471	29.348	NaN	11230	30	0	1672.6	0.106	+			50997	YISEHEHF	8	86	531.2372516402461	1060.459950347292	2	531.2383422851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YISEHEHF_	CLPTM1|p.F118L|1|0.05|ENSG00000104853|chr19:44974483-44974483|C/A|missense_variant;ENSG00000104853|ENST00000337392|CLPTM1;nc|ENSG00000104853|O96005-3|CLPTM1;nc|ENSG00000104853|O96005-4|CLPTM1	76.84663266511073	0.3498490246073164	2				NaN	NaN	0	NaN	7002	3467	10469
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10472	29.35	NaN	6337.3	30	0	645.79	0.106				-1	 	0	64	449.7056867861204	897.3968206390408	2	449.705810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7003	3467	10469
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10473	29.352	NaN	13008	30	0	1429.5	0.106	+			36179	SELITKAV	8	70	430.7574177761019	859.5002826190038	2	430.7580261230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SELITKAV_	ENSG00000124575|ENST00000244534|H1-3;ENSG00000168298|ENST00000304218|H1-4;ENSG00000184357|ENST00000331442|H1-5;ENSG00000187837|ENST00000343677|H1-2	90.36981228632155	0.27635063874291205	2				NaN	NaN	0	NaN	7004	3467	10469
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10474	29.354	NaN	3281.7	30	0	1772.1	0.106				-1	LIFGCIVIL	9	26	349.88130737022846	1046.6220927108855	3	349.8817138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_LIFGC(Carbamidomethyl (C))IVIL_	ENSG00000256797|ENST00000535540|KLRF2	21.9598887501803	0.5980208138527809	2				NaN	NaN	0	NaN	7005	3467	10469
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10475	29.355	NaN	4096.4	30	0	415.3	0.034	+			23456	LAEEKAAVL	9	60	472.2761756093215	942.537798285443	2	472.2763366699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LAEEKAAVL_	ENSG00000105357|ENST00000642316|MYH14;MYH14|p.L1950Sfs*14|1|0.34|ENSG00000105357|chr19:50309646-50309646|C/-|frameshift_variant;nc|ENSG00000105357|Q7Z406-6|MYH14;nc|ENSG00000105357|Q7Z406|MYH14	65.46538089061403	0.16805504838372562	2				NaN	NaN	0	NaN	7006	3467	10469
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10476	29.356	NaN	4883.7	30	0	1317	0.14			+	23509	LAGWLEGEK	9	65	501.7673531711674	1001.5201534091348	2	501.7670593261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LAGWLEGEK_	REV__ENST00000257934.8_2_12:53662091-53662609:+|nuORF	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	7007	3467	10469
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10490	29.387	NaN	50663	30	0	12126	0.211	+			39895	STLSTVISK	9	85	468.27364620485395	934.5327394765079	2	468.2736511230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STLSTVISK_	ENSG00000174197|ENST00000703841|MGA;MGA|p.D2578Rfs*45|1|0.32|ENSG00000174197|chr15:41762342-41762343|-/A|frameshift_variant;MGA|p.S2228Kfs*5|1|0.33|ENSG00000174197|chr15:41750284-41750285|-/A|frameshift_variant;MGA|p.T1916Qfs*7|1|0.4|ENSG00000174197|chr15:41749350-41749350|A/-|frameshift_variant	146.78539889680295	0.007618400906539062	2				NaN	NaN	0	NaN	7018	3470	10489
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10491	29.391	NaN	37122	30	0	6564.6	0.106				-1	 	0	79	489.7531850341124	977.4918171350248	2	489.7535095214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7019	3470	10489
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10492	29.393	NaN	30364	30	0	9221.4	0.106				-1	 	0	81	423.2576750296837	844.5007971261674	2	423.25799560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7020	3470	10489
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10493	29.395	NaN	7667.2	30	0	1285.7	0.106				-1	 	0	69	456.7135820071157	911.4126110810314	2	456.7140197753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7021	3470	10489
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10494	29.397	NaN	5644.1	30	0	2630.9	0.106	+			24474	LGGIPNEKY	9	68	495.7660556368449	989.5175583404898	2	495.76641845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LGGIPNEKY_	CATSPERG|p.P884Qfs*18|1|0.48|ENSG00000099338|chr19:38367188-38367188|C/-|frameshift_variant;ENSG00000099338|ENST00000409235|CATSPERG;ENST00000467739.1_1_19:38837137-38839675:+|nuORF	47.657333605630114	0.33044192980041115	2				NaN	NaN	0	NaN	7022	3470	10489
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10495	29.398	NaN	8686.4	30	0	2322.1	0.106			+	48066	VSSPPTLPSL	10	72	499.28144658167605	996.5483402301521	2	499.2817077636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VSSPPTLPSL_	REV__ENSG00000118058|ENST00000534358|KMT2A;REV__KMT2A|p.E1318Kfs*38|1|0.28|ENSG00000118058|chr11:118482028-118482028|A/-|frameshift_variant;REV__KMT2A|p.K1773Sfs*47|1|0.26|ENSG00000118058|chr11:118494727-118494727|A/-|frameshift_variant;REV__KMT2A|p.K1938Sfs*43|1|0.42|ENSG00000118058|chr11:118498386-118498386|A/-|frameshift_variant;REV__KMT2A|p.L3197Wfs*15|1|0.31|ENSG00000118058|chr11:118505488-118505488|T/-|frameshift_variant;REV__KMT2A|p.P1289Ffs*68|1|0.17|ENSG00000118058|chr11:118481943-118481944|-/GT|frameshift_variant;REV__nc|ENSG00000118058|Q03164-2|KMT2A;REV__nc|ENSG00000118058|Q03164|KMT2A	63.53385203322761	0.33370026130094593	2				NaN	NaN	0	NaN	7023	3470	10489
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10496	29.4	NaN	3109.3	30	0	850.91	0.036	+			30980	QEQVKQYAL	9	66	553.7951637703981	1105.575774607596	2	553.7960815429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QEQVKQYAL_	ENSG00000100815|ENST00000267622|TRIP11;nc|ENSG00000100815|Q15643-2|TRIP11	93.1432384553994	0.056003526918089595	2				NaN	NaN	0	NaN	7024	3470	10489
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10509	29.428	NaN	17422	30	0	4178.1	0.214	+			15444	GTYVGLTCK	9	76	471.2412092197432	940.4678655062864	2	471.24151611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTYVGLTCK_	ENSG00000221926|ENST00000649191|TRIM16;nc|ENSG00000221926|O95361-2|TRIM16;nc|ENSG00000291110|Q309B1|TRIM16L	101.25262130126117	0.03792372629710479	2				NaN	NaN	0	NaN	7034	3473	10508
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10510	29.431	NaN	6022.4	30	0	2119.8	0.106	+			49897	VYTTMAEHF	9	70	557.7467742994855	1113.478995665771	2	557.7479858398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_VYTTM(Oxidation (M))AEHF_	ENSG00000117472|ENST00000372003|TSPAN1;TSPAN1|p.T119M|1|0.33|ENSG00000117472|chr1:46184801-46184801|C/T|missense_variant	99.37495909608758	0.03983967222258828	2				NaN	NaN	0	NaN	7035	3473	10508
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10511	29.433	NaN	5709.3	30	0	1008.1	0.106	+			14039	GSGQFAIVK	9	64	453.7551209225277	905.4956889118554	2	453.755615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GSGQFAIVK_	DAPK2|p.P226Lfs*17|1|0.2|ENSG00000035664|chr15:63926076-63926076|G/-|frameshift_variant;ENSG00000035664|ENST00000457488|DAPK2;ENST00000558482.5_1_15:64221904-64332460:-|nuORF;nc|ENSG00000035664|Q9UIK4-2|DAPK2	107.00750918261382	0.032051501805654005	2				NaN	NaN	0	NaN	7036	3473	10508
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10512	29.435	NaN	4086.6	30	0	2764	0.106	+			48137	VSVSEKNGMQV	11	59	589.2971367637131	1176.579720594226	2	589.2982788085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSVSEKNGMQV_	ENSG00000065534|ENST00000360304|MYLK;ENST00000506361.5_1_3:123456168-123512688:-|nuORF;MYLK|p.P1126Qfs*8|1|0.11|ENSG00000065534|chr3:123700091-123700091|G/-|frameshift_variant;MYLK|p.R823Gfs*27|1|0.14|ENSG00000065534|chr3:123701002-123701002|C/-|frameshift_variant;nc|ENSG00000065534|Q15746-2|MYLK;nc|ENSG00000065534|Q15746-3|MYLK;nc|ENSG00000065534|Q15746-4|MYLK;nc|ENSG00000065534|Q15746-5|MYLK;nc|ENSG00000065534|Q15746-6|MYLK	40.05817265558897	0.5571470695993369	2				NaN	NaN	0	NaN	7037	3473	10508
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10513	29.437	NaN	4763.8	30	0	757.75	0.106	+			42272	TACDIQTHM	9	64	510.2174506862025	1018.420348439205	2	510.218017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TACDIQTHM_	ENSG00000135341|ENST00000369329|MAP3K7;MAP3K7|p.K209Nfs*14|1|0.31|ENSG00000135341|chr6:90553567-90553567|T/-|frameshift_variant;nc|ENSG00000135341|O43318-2|MAP3K7;nc|ENSG00000135341|O43318-3|MAP3K7;nc|ENSG00000135341|O43318-4|MAP3K7	47.95952297671804	0.32689736945648856	2				NaN	NaN	0	NaN	7038	3473	10508
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10514	29.439	NaN	10898	30	0	2072.8	0.034				-1	 	0	65	463.2889173181316	924.5632817030632	2	463.28924560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7039	3473	10508
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10515	29.439	NaN	5574.9	30	0	332.53	0.14				-1	SGCQITWAK	9	72	525.7547345053164	1049.4949160774327	2	525.7556762695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_SGC(Carbamidomethyl (C))QITWAK_	ENSG00000168610|ENST00000264657|STAT3;ENST00000471989.5_1_17:40475518-40477070:-|nuORF;nc|ENSG00000168610|P40763-2|STAT3;nc|ENSG00000168610|P40763-3|STAT3;STAT3|p.R729Afs*3|2|0.33|ENSG00000168610|chr17:42316861-42316861|G/-|frameshift_variant	40.05817265558897	0.419577045485086	2				NaN	NaN	0	NaN	7040	3473	10508
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10526	29.466	NaN	36681	30	0	16409	0.214	+			30985	QERLATAL	8	76	451.2584485514885	900.5023441697771	2	451.2585754394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QERLATAL_	CON__Q3SX28;ENSG00000140416|ENST00000403994|TPM1;ENSG00000143549|ENST00000651641|TPM3;ENSG00000167460|ENST00000643579|TPM4;ENSG00000198467|ENST00000645482|TPM2;ENST00000391998.3_1_19:53982744-53982942:+|nuORF;ENST00000471212.5_1_9:35684790-35689844:-|nuORF;ENST00000473036.2_1_1:154145382-154155604:-|nuORF;ENST00000520239.1_1_8:70041855-70042335:+|nuORF;ENST00000558400.1_1_15:63349204-63351954:+|nuORF;ENST00000558868.5_1_15:63340774-63353139:+|nuORF;ENST00000560975.5_1_15:63335715-63353895:+|nuORF;ENST00000587201.5_1_19:16187360-16198908:+|nuORF;nc|ENSG00000140416|P09493-10|TPM1;nc|ENSG00000140416|P09493-2|TPM1;nc|ENSG00000140416|P09493-3|TPM1;nc|ENSG00000140416|P09493-4|TPM1;nc|ENSG00000140416|P09493-5|TPM1;nc|ENSG00000140416|P09493-6|TPM1;nc|ENSG00000140416|P09493-7|TPM1;nc|ENSG00000140416|P09493-8|TPM1;nc|ENSG00000140416|P09493-9|TPM1;nc|ENSG00000143549|P06753-2|TPM3;nc|ENSG00000143549|P06753-3|TPM3;nc|ENSG00000143549|P06753-4|TPM3;nc|ENSG00000143549|P06753-5|TPM3;nc|ENSG00000143549|P06753-6|TPM3;nc|ENSG00000167460|P67936-2|TPM4;nc|ENSG00000198467|P07951-2|TPM2;nc|ENSG00000198467|P07951-3|TPM2	110.11987700582712	0.24509564897437786	2				NaN	NaN	0	NaN	7048	3476	10525
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10527	29.47	NaN	7066.8	30	0	1283.8	0.106	+			47755	VSGPTLLAK	9	66	443.2734620549203	884.5323711766406	2	443.27374267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSGPTLLAK_	ENSG00000126790|ENST00000247194|L3HYPDH;ENST00000527981.1_1_14:59950407-59951094:-|nuORF	51.19269402634007	0.2889735674168909	2				NaN	NaN	0	NaN	7049	3476	10525
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10528	29.472	NaN	4127.9	30	0	444.15	0.106				-1	 	0	67	478.76112307164027	955.5076932100806	2	479.7691650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7050	3476	10525
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10529	29.474	NaN	9510.2	30	0	1005.2	0.106	+			33967	RSEEMGLIL	9	70	524.2778935136292	1046.5412340940584	2	524.2792358398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RSEEMGLIL_	ENSG00000060656|ENST00000373779|PTPRU;nc|ENSG00000060656|Q92729-3|PTPRU;nc|ENSG00000060656|Q92729-4|PTPRU;nc|ENSG00000060656|Q92729|PTPRU;PTPRU|p.G852Afs*35|1|0.26|ENSG00000060656|chr1:29303898-29303898|G/-|frameshift_variant	84.9155231211612	0.07920012719736333	2				NaN	NaN	0	NaN	7051	3476	10525
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10530	29.476	NaN	8041.3	30	0	907.19	0.106			+	9184	EGQILRLLA	9	64	506.81134762804817	1011.6081423228964	2	506.8111267089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EGQILRLLA_	REV__ENSG00000056487|ENST00000313237|PHF21B;REV__nc|ENSG00000056487|Q96EK2-3|PHF21B;REV__nc|ENSG00000056487|Q96EK2-4|PHF21B	83.6470233535746	0.08277643980271215	2				NaN	NaN	0	NaN	7052	3476	10525
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10531	29.477	NaN	3675.1	30	0	715.38	0.106	+			2589	AQGAVFLGK	9	62	445.758425218069	889.5022975029381	2	445.7581787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AQGAVFLGK_	ENSG00000073803|ENST00000265026|MAP3K13;ENST00000433092.5_1_3:185155245-185169222:+|nuORF;ENST00000477582.1_1_3:185155245-185161425:+|nuORF;MAP3K13|p.P645Lfs*19|1|0.35|ENSG00000073803|chr3:185473261-185473261|C/-|frameshift_variant;MAP3K13|p.V334Lfs*14|1|0.29|ENSG00000073803|chr3:185447932-185447932|A/-|frameshift_variant;nc|ENSG00000073803|O43283-4|MAP3K13	76.7741389293348	0.11149722112137898	2				NaN	NaN	0	NaN	7053	3476	10525
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10532	29.479	NaN	7929.6	30	0	2758.3	0.036	+			36321	SESNHLIHL	9	57	350.51711755373003	1048.52952326139	3	350.5174865722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SESNHLIHL_	ENSG00000090989|ENST00000381295|EXOC1;EXOC1|p.E754Kfs*18|1|0.25|ENSG00000090989|chr4:55899799-55899799|A/-|frameshift_variant;EXOC1|p.G824Vfs*2|5|0.15|ENSG00000090989|chr4:55902469-55902469|A/-|frameshift_variant;EXOC1|p.K777Nfs*2|1|0.37|ENSG00000090989|chr4:55899874-55899874|A/-|frameshift_variant;nc|ENSG00000090989|Q9NV70-2|EXOC1	35.61828744233558	0.47037581924408073	2				NaN	NaN	0	NaN	7054	3476	10525
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10545	29.506	NaN	497050	30	0	172380	0.153				-1	 	0	95	453.2680526065638	904.5215522799276	2	453.268310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7064	3479	10544
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10546	29.509	NaN	18374	30	0	2903.5	0.106			+	23907	LDLAAGGKI	9	77	429.25759508872335	856.5006372442467	2	429.2578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LDLAAGGKI_	REV__DNAH8|p.D4227Afs*7|1|0.04|ENSG00000124721|chr6:39008929-39008930|-/CAGTGTT|frameshift_variant;REV__ENSG00000124721|ENST00000327475|DNAH8;REV__nc|ENSG00000124721|Q96JB1-2|DNAH8;REV__nc|ENSG00000124721|Q96JB1|DNAH8	82.24051045832904	0.08786059719216216	2				NaN	NaN	0	NaN	7065	3479	10544
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10547	29.511	NaN	12014	30	0	5363.3	0.106			+	45721	VAASNVPVPG	10	77	455.75264954432447	909.490746155449	2	455.7529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VAASNVPVPG_	REV__ENSG00000196526|ENST00000420658|AFAP1;REV__ENST00000505447.5_1_4:7765494-7780765:-|nuORF;REV__ENST00000513842.1_1_4:7765494-7800689:-|nuORF;REV__nc|ENSG00000196526|Q8N556|AFAP1	56.72105179125745	0.3956618550748046	2				NaN	NaN	0	NaN	7066	3479	10544
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10548	29.513	NaN	13244	30	0	3466.6	0.106	+			19359	KALDFIASK	9	78	496.79197778071534	991.5694026282307	2	496.79229736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KALDFIASK_	ACTN1|p.N119Efs*3|1|0.38|ENSG00000072110|chr14:68912228-68912229|-/TC|frameshift_variant;ENSG00000072110|ENST00000394419|ACTN1;ENSG00000130402|ENST00000252699|ACTN4;ENSG00000248746|ENST00000513398|ACTN3;ENST00000502692.5_1_11:66313918-66328094:+|nuORF;ENST00000513398.1_1_11:66314411-66328094:+|nuORF;ENST00000588618.5_1_19:39138385-39212431:+|nuORF;nc|ENSG00000072110|P12814-2|ACTN1;nc|ENSG00000072110|P12814-4|ACTN1;nc|ENSG00000072110|P12814|ACTN1	139.38205640894643	0.01076996779551382	2				NaN	NaN	0	NaN	7067	3479	10544
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10549	29.515	NaN	5363	30	0	517.87	0.106			+	26352	LTAHGQHLR	9	73	516.7912530259069	NaN	0	516.7913208007812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LTAHGQHLR_	REV__ENSG00000283288|ENST00000637503|SMIM33	77.31757898189308	0.08057531075035683	2				NaN	NaN	0	NaN	7068	3479	10544
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10550	29.517	NaN	5560.3	30	0	2672.5	0.106	+			25995	LSKKLFFF	8	52	343.874822662788	1028.602638588564	3	343.8745422363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSKKLFFF_	ENSG00000100985|ENST00000372330|MMP9	45.9519527083369	0.6193794311207887	2				NaN	NaN	0	NaN	7069	3479	10544
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10551	29.518	NaN	4600.9	30	0	278.92	0.036	+			17434	IAVEKDQVY	9	65	532.7835785998241	1063.552604266448	2	532.7849731445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IAVEKDQVY_	ENSG00000196116|ENST00000355295|TDRD7;nc|ENSG00000196116|Q8NHU6-2|TDRD7;nc|ENSG00000196116|Q8NHU6-3|TDRD7	95.81516180277367	0.04847050768394289	2				NaN	NaN	0	NaN	7070	3479	10544
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10567	29.551	NaN	15346	30	0	7339.3	0.214	+			2936	ASDGVWNSI	9	70	474.7244305424493	947.4343081516986	2	474.7243957519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASDGVWNSI_	ENST00000377902.5_1_9:36249201-36258352:-|nuORF	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	7083	3482	10566
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10568	29.554	NaN	13218	30	0	3365.7	0.106			+	-1	GMESNGRGL	9	67	468.7136365192429	935.4127201052859	2	468.7138366699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_GM(Oxidation (M))ESNGRGL_	REV__ENST00000375906.5_1_6:31632649-31632688:-|nuORF	37.81151784470057	0.4459294069877048	2				NaN	NaN	0	NaN	7084	3482	10566
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10569	29.556	NaN	9044.6	30	0	888	0.106			+	-1	YIQQTMAP	8	69	484.2306504405591	966.4467479479182	2	484.2310791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_YIQQTM(Oxidation (M))AP_	REV__ENSG00000160783|ENST00000368277|PMF1;REV__nc|ENSG00000160783|Q6P1K2-3|PMF1;REV__nc|ENSG00000160783|Q6P1K2-4|PMF1;REV__nc|ENSG00000160783|Q6P1K2-5|PMF1;REV__nc|ENSG00000160783|Q6P1K2-6|PMF1	45.9519527083369	0.6193794311207887	2				NaN	NaN	0	NaN	7085	3482	10566
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10570	29.558	NaN	4234.8	30	0	655.37	0.106	+			50415	YAAQATTPM	9	62	477.2228243220421	952.4310957108842	2	477.22308349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YAAQATTPM_	ENSG00000239306|ENST00000310137|RBM14;RBM14|p.A565Gfs*13|1|0.47|ENSG00000239306|chr11:66625564-66625565|-/G|frameshift_variant;RBM14|p.K594Rfs*15|1|0.67|ENSG00000239306|chr11:66625653-66625653|A/-|frameshift_variant	87.75429964447693	0.0711966946989736	2				NaN	NaN	0	NaN	7086	3482	10566
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10571	29.56	NaN	5677.2	30	0	607.04	0.106	+			9580	ELKALVAE	8	64	436.75750193432276	871.5004509354455	2	436.7581481933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ELKALVAE_	CCDC14|p.E558Rfs*13|1|0.03|ENSG00000175455|chr3:123931229-123931230|-/T|frameshift_variant;CCDC14|p.E558Vfs*7|1|0.04|ENSG00000175455|chr3:123931228-123931229|-/TTGAATAA|frameshift_variant;CCDC14|p.V615Afs*13|1|0.05|ENSG00000175455|chr3:123915674-123915675|-/TAATGAG|frameshift_variant;ENSG00000175455|ENST00000409697|CCDC14;ENST00000485949.5_1_3:123652514-123665686:-|nuORF;ENST00000495381.5_1_3:123633936-123674711:-|nuORF;nc|ENSG00000175455|Q49A88-2|CCDC14;nc|ENSG00000175455|Q49A88-3|CCDC14;nc|ENSG00000175455|Q49A88-4|CCDC14;nc|ENSG00000175455|Q49A88-6|CCDC14;nc|ENSG00000175455|Q49A88|CCDC14	79.71258880314673	0.32596852995588826	2				NaN	NaN	0	NaN	7087	3482	10566
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10572	29.562	NaN	3054.5	30	0	282.23	0.034			+	-1	GEGQLARAE	9	63	486.742008270159	971.469463607118	2	486.74249267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))GEGQLARAE_	REV__ENST00000393409.2_1_3:126752902-126753223:+|nuORF	44.116797842482775	0.37197099687881774	2				NaN	NaN	0	NaN	7088	3482	10566
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10573	29.562	NaN	4015.2	30	0	436.87	0.139	+			38031	SPPAETHVF	9	67	492.74239847186624	983.4702440105325	2	492.7428894042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SPPAETHVF_	COL12A1|p.F2273Lfs*20|1|0.26|ENSG00000111799|chr6:75124000-75124000|A/-|frameshift_variant;COL12A1|p.G2777Wfs*37|1|0.15|ENSG00000111799|chr6:75102684-75102685|-/G|frameshift_variant;COL12A1|p.G3027Wfs*19|1|0.1|ENSG00000111799|chr6:75087680-75087681|-/G|frameshift_variant;COL12A1|p.L2085Hfs*4|1|0.22|ENSG00000111799|chr6:75128382-75128383|-/T|frameshift_variant;COL12A1|p.P2307Lfs*21|1|0.25|ENSG00000111799|chr6:75123356-75123356|G/-|frameshift_variant;COL12A1|p.T1046Qfs*7|2|0.22|ENSG00000111799|chr6:75156372-75156372|G/-|frameshift_variant;ENSG00000111799|ENST00000322507|COL12A1;nc|ENSG00000111799|Q99715-4|COL12A1	51.33545320467046	0.2872990594074956	2				NaN	NaN	0	NaN	7089	3482	10566
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10587	29.594	NaN	9225.7	30	0	709.8	0.214	+			37952	SPFATTTKY	9	67	508.2585006204193	1014.5024483076386	2	508.2584228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SPFATTTKY_	ENSG00000130147|ENST00000392011|SH3BP4	93.1432384553994	0.056003526918089595	2				NaN	NaN	0	NaN	7100	3485	10586
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10588	29.597	NaN	14980	30	0	4835.6	0.106			+	38688	SSKFKLRE	8	52	332.19390120876346	993.5598742264904	3	332.19415283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSKFKLRE_	REV__ENSG00000166326|ENST00000299413|TRIM44;REV__TRIM44|p.D247N|1|0.45|ENSG00000166326|chr11:35685328-35685328|G/A|missense_variant	51.33545320467046	0.5859736979383976	2				NaN	NaN	0	NaN	7101	3485	10586
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10589	29.599	NaN	8190	30	0	1442.8	0.106	+			14919	GTMAMTVVTK	10	83	519.768603260179	1037.522653587158	2	519.7702026367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTMAMTVVTK_	ENSG00000175115|ENST00000320580|PACS1;nc|ENSG00000175115|Q6VY07-2|PACS1	122.93914200107957	0.02317863035582428	2				NaN	NaN	0	NaN	7102	3485	10586
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10590	29.601	NaN	5091.3	30	0	1122.2	0.106			+	47291	VNGPLNEAY	9	63	488.7398421183185	975.465131303437	2	488.7400207519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VNGPLNEAY_	REV__ENSG00000167615|ENST00000326764|LENG8;REV__nc|ENSG00000167615|Q96PV6-1|LENG8	51.33545320467046	0.2872990594074956	2				NaN	NaN	0	NaN	7103	3485	10586
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10591	29.603	NaN	4838.5	30	0	556.1	0.106	+			28143	NALAVSTKY	9	66	483.7654329994345	965.516313065669	2	483.7659912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NALAVSTKY_	CLUH|p.D1252Tfs*5|1|0.42|ENSG00000132361|chr17:2690771-2690771|T/-|frameshift_variant;ENSG00000132361|ENST00000651024|CLUH;ENST00000572014.1_1_17:2595653-2597426:-|nuORF;ENST00000574210.5_1_17:2594901-2597328:-|nuORF;nc|ENSG00000132361|O75153|CLUH	53.08895987439943	0.27122541748218487	2				NaN	NaN	0	NaN	7104	3485	10586
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10592	29.605	NaN	8253.8	30	0	921.84	0.035	+			18335	IPVGTNEFTA	10	71	524.7713815963008	NaN	0	524.7713012695312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IPVGTNEFTA_	ENSG00000055163|ENST00000620254|CYFIP2;ENST00000522884.5_1_5:156811334-156816436:+|nuORF;ENST00000524058.1_1_5:156810283-156816436:+|nuORF;nc|ENSG00000055163|Q96F07|CYFIP2	87.75429964447693	0.06236080756658773	2				NaN	NaN	0	NaN	7105	3485	10586
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10593	29.605	NaN	4415.7	30	0	792.26	0.141	+			28756	NPASGEKFAY	10	65	542.2581940151689	1082.5018350971377	2	542.2592163085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NPASGEKFAY_	ENSG00000001630|ENST00000003100|CYP51A1;ENST00000419457.1_1_13:29296686-29297403:-|nuORF;nc|ENSG00000001630|Q16850-2|CYP51A1	152.06079943815163	0.008129625933261015	2				NaN	NaN	0	NaN	7106	3485	10586
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10607	29.637	NaN	2508.1	30	0	1482.8	0.214			+	13803	GQLYIVRQ	8	32	326.1903248250044	975.5491450752131	3	326.1904602050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GQLYIVRQ_	REV__ENSG00000107147|ENST00000371757|KCNT1;REV__ENSG00000162687|ENST00000294725|KCNT2;REV__ENST00000498426.5_1_1:196286396-196434478:-|nuORF;REV__ENST00000610076.1_1_1:196227273-196577439:-|nuORF;REV__nc|ENSG00000107147|Q5JUK3-2|KCNT1;REV__nc|ENSG00000107147|Q5JUK3-4|KCNT1;REV__nc|ENSG00000107147|Q5JUK3|KCNT1;REV__nc|ENSG00000162687|Q6UVM3-2|KCNT2;REV__nc|ENSG00000162687|Q6UVM3-3|KCNT2;REV__nc|ENSG00000162687|Q6UVM3-4|KCNT2	30.503639358989545	0.7238069182250283	2				NaN	NaN	0	NaN	7117	3488	10606
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10608	29.641	NaN	7934.8	30	0	1210.3	0.106	+			37090	SISISVARG	9	59	445.25825343459906	NaN	0	445.25811767578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SISISVARG_	CON__P04264;ENSG00000167768|ENST00000252244|KRT1	98.62937762414208	0.024200618960070384	2				NaN	NaN	0	NaN	7118	3488	10606
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10609	29.643	NaN	12495	30	0	2811.7	0.106	+			40028	STMVDVRVMK	10	61	389.20649995561223	1164.5976704670368	3	389.20703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STMVDVRVMK_	ENSG00000085224|ENST00000373344|ATRX;nc|ENSG00000085224|P46100-2|ATRX;nc|ENSG00000085224|P46100-3|ATRX;nc|ENSG00000085224|P46100-4|ATRX;nc|ENSG00000085224|P46100-5|ATRX	38.753607047826485	0.5606299674732264	2				NaN	NaN	0	NaN	7119	3488	10606
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10610	29.644	NaN	4032.1	30	0	886.96	0.106	+			47438	VPTDEARAF	9	68	503.25341728932716	1004.4922816454543	2	503.2537841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VPTDEARAF_	ENSG00000103769|ENST00000261890|RAB11A;ENSG00000185236|ENST00000328024|RAB11B;nc|ENSG00000103769|P62491-2|RAB11A;nc|ENSG00000185236|Q15907-2|RAB11B	42.86426827375447	0.38666266728046506	2				NaN	NaN	0	NaN	7120	3488	10606
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10611	29.646	NaN	4640.7	30	0	1091.9	0.106	+			22323	KTFSEVLAEK	10	75	576.3179111094662	1150.6212692857323	2	576.31884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KTFSEVLAEK_	ENSG00000058673|ENST00000367210|ZC3H11A;ZC3H11A|p.H415Tfs*23|1|0.41|ENSG00000058673|chr1:203847375-203847376|-/A|frameshift_variant;ZC3H11A|p.T443Qfs*2|1|0.39|ENSG00000058673|chr1:203847462-203847462|A/-|frameshift_variant	63.69406221917213	0.3322431690470481	2				NaN	NaN	0	NaN	7121	3488	10606
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10612	29.648	NaN	2523.6	30	0	513.23	0.036			+	-1	EFLVLAGYM	9	66	529.7659921646302	1057.5174313960604	2	529.767333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_EFLVLAGYM(Oxidation (M))_	REV__ENSG00000166377|ENST00000426216|ATP9B;REV__ENST00000587410.1_1_18:77132833-77134205:+|nuORF;REV__ENST00000588921.1_3_18:77132616-77137380:+|nuORF;REV__nc|ENSG00000166377|O43861-2|ATP9B	33.51558372728122	0.4900267029546261	2				NaN	NaN	0	NaN	7122	3488	10606
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10613	29.649	NaN	5456	30	0	472.19	0.14	+			25414	LPLEQSKSF	9	71	524.7866400765131	1047.558727219826	2	524.7869873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LPLEQSKSF_	CMYA5|p.I3735Hfs*2|1|0.08|ENSG00000164309|chr5:79758842-79758843|-/T|frameshift_variant;CMYA5|p.N2399Ifs*16|1|0.46|ENSG00000164309|chr5:79735957-79735957|A/-|frameshift_variant;CMYA5|p.P4051Nfs*8|1|0.05|ENSG00000164309|chr5:79799555-79799561|AACCTGG/-|frameshift_variant;CMYA5|p.S3683Pfs*17|1|0.14|ENSG00000164309|chr5:79752728-79752728|T/-|frameshift_variant;ENSG00000164309|ENST00000446378|CMYA5	60.11826168202944	0.21262886028301267	2				NaN	NaN	0	NaN	7123	3488	10606
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10624	29.676	NaN	27949	30	0	12600	0.214	+			29082	NTMNITISK	9	72	511.2704976209124	1020.5264423086248	2	511.2709045410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NTMNITISK_	ENSG00000129003|ENST00000644861|VPS13C;nc|ENSG00000129003|Q709C8-2|VPS13C;nc|ENSG00000129003|Q709C8-3|VPS13C;nc|ENSG00000129003|Q709C8-4|VPS13C;VPS13C|p.E2463Nfs*18|1|0.25|ENSG00000129003|chr15:61920157-61920157|C/-|frameshift_variant;VPS13C|p.N3163Sfs*6|1|0.05|ENSG00000129003|chr15:61882732-61882733|-/TTATCATCAC|frameshift_variant;VPS13C|p.P3597Lfs*3|1|0.26|ENSG00000129003|chr15:61868732-61868732|G/-|frameshift_variant	159.33581866081465	0.004693099277440949	2				NaN	NaN	0	NaN	7131	3491	10623
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10625	29.679	NaN	16190	30	0	5816.9	0.106			+	45045	TVGGGRGART	10	62	466.2576761531794	930.5007993731588	2	466.2580871582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVGGGRGART_	REV__ENST00000375946.8_1_10:27444162-27444405:+|nuORF	96.0336014099291	0.09653029772959643	2				NaN	NaN	0	NaN	7132	3491	10623
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10626	29.681	NaN	2951.2	30	0	455.22	0.106	+			19802	KEAVILYAQ	9	64	517.7986703915228	1033.5827878498455	2	517.79931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEAVILYAQ_	ENSG00000133466|ENST00000337843|C1QTNF6;ENST00000470655.5_1_22:37578230-37578845:-|nuORF;ENST00000493023.1_1_22:37578230-37581504:-|nuORF;nc|ENSG00000133466|Q9BXI9-1|C1QTNF6;nc|ENSG00000133466|Q9BXI9-3|C1QTNF6	47.95952297671804	0.32689736945648856	2				NaN	NaN	0	NaN	7133	3491	10623
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10627	29.683	NaN	6775.2	30	0	2206.9	0.106	+			19099	IYKDNRNLF	9	60	394.8798926840079	1181.6178486522238	3	394.880126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IYKDNRNLF_	ENSG00000007402|ENST00000424201|CACNA2D2;ENST00000487413.1_1_3:50453473-50541058:-|nuORF;nc|ENSG00000007402|Q9NY47-3|CACNA2D2;nc|ENSG00000007402|Q9NY47-4|CACNA2D2;nc|ENSG00000007402|Q9NY47-5|CACNA2D2;nc|ENSG00000007402|Q9NY47|CACNA2D2	54.776311868738084	0.25715957988447635	2				NaN	NaN	0	NaN	7134	3491	10623
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10628	29.685	NaN	3342.9	30	0	408.83	0.106	+			38094	SPTTLKPLR	9	61	506.81134762804817	1011.6081423228964	2	507.81866455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SPTTLKPLR_	ENST00000442011.6_1_5:135379800-135382117:+|nuORF	46.45678178249821	0.34452392205506005	2				NaN	NaN	0	NaN	7135	3491	10623
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10629	29.687	NaN	30395	30	0	12407	0.039				-1	 	0	75	411.558861367404	1231.654754702412	3	411.5592956542969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7136	3491	10623
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10630	29.687	NaN	7320.7	30	0	408.33	0.138	+			45866	VAMAAARAL	9	76	437.2517974994331	872.4890420656662	2	437.252197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VAMAAARAL_	ENSG00000196943|ENST00000267425|NOP9;nc|ENSG00000196943|Q86U38-2|NOP9	119.55681237560556	0.021468056596162587	2				NaN	NaN	0	NaN	7137	3491	10623
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10643	29.716	NaN	86910	30	0	35781	0.214	+			14843	GTLMWHQMK	9	71	377.8522167359889	1130.5348208081668	3	377.852783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTLMWHQMK_	ENST00000346169.6_1_3:184032401-184033585:+|nuORF;ENST00000352767.7_2_3:184032446-184033585:+|nuORF	38.80614096846853	0.43426287593479557	2				NaN	NaN	0	NaN	7147	3494	10642
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10644	29.72	NaN	30034	30	0	6478.5	0.106	+			4949	ATQSFSTFR	9	89	522.7585409116949	1043.5025288901898	2	522.7596435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATQSFSTFR_	ENSG00000044090|ENST00000265348|CUL7;nc|ENSG00000044090|Q14999-2|CUL7	182.3913890336628	0.0010559746847940753	2				NaN	NaN	0	NaN	7148	3494	10642
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10645	29.722	NaN	7885.2	30	0	1021.7	0.106	+			38716	SSLDVSLQK	9	79	488.76851250449886	975.5224720757977	2	488.7689208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSLDVSLQK_	CENPJ|p.L906*|1|0.48|ENSG00000151849|chr13:24904034-24904034|A/-|frameshift_variant;ENSG00000151849|ENST00000381884|CENPJ;nc|ENSG00000151849|Q9HC77-2|CENPJ	78.26377905018397	0.10505600812668463	2				NaN	NaN	0	NaN	7149	3494	10642
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10646	29.724	NaN	12122	30	0	2276.4	0.106	+			19137	IYNGKVTSI	9	70	497.78079797211745	993.5470430110349	2	497.7820739746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IYNGKVTSI_	ENSG00000067596|ENST00000262415|DHX8;ENST00000587044.1_1_17:41568567-41594747:+|nuORF	104.0567914643314	0.03506238181059741	2				NaN	NaN	0	NaN	7150	3494	10642
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10647	29.726	NaN	4594.3	30	0	447.72	0.106	+			473	AAVSTHVAL	9	58	434.7473889199901	867.4802249067802	2	434.7479248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AAVSTHVAL_	ENSG00000163501|ENST00000295731|IHH;IHH|p.E379Rfs*18|2|0.25|ENSG00000163501|chr2:219055308-219055308|C/-|frameshift_variant;IHH|p.Q386Sfs*11|1|0.4|ENSG00000163501|chr2:219055287-219055287|G/-|frameshift_variant	94.00642277110589	0.05356993013874309	2				NaN	NaN	0	NaN	7151	3494	10642
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10648	29.727	NaN	7288	30	0	2511	0.038				-1	QAARCPTDEL	10	57	387.5168086052639	1159.5285964159918	3	387.5172424316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_QAARC(Carbamidomethyl (C))PTDEL_	ENSG00000073969|ENST00000398238|NSF;ENST00000486366.1_1_17:44668129-44707830:+|nuORF;NSF|p.I556Lfs*18|1|0.09|ENSG00000073969|chr17:46713887-46713887|A/-|frameshift_variant	30.568863376406313	0.6301935916953115	2				NaN	NaN	0	NaN	7152	3494	10642
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10649	29.728	NaN	8932.1	30	0	1359.4	0.139	+			38840	SSNLFVTGK	9	74	476.7585662990516	951.5025796649032	2	476.7583312988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSNLFVTGK_	ENST00000451596.2_1_9:74929993-74930062:+|nuORF	117.7056744995986	0.022588689529990102	2				NaN	NaN	0	NaN	7153	3494	10642
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10660	29.755	NaN	33396	30	0	11481	0.213	+			16795	HPDEKSIITY	10	92	601.8060588924541	1201.597564851708	2	601.8063354492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HPDEKSIITY_	ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1;SPTBN1|p.K503Rfs*24|1|0.06|ENSG00000115306|chr2:54626095-54626095|G/-|frameshift_variant	164.45504665044191	0.00544846538291036	2				NaN	NaN	0	NaN	7161	3497	10659
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10661	29.759	NaN	21293	30	0	5578.7	0.106	+			15513	GVCSTLTIK	9	75	489.7673122773621	977.5200716215243	2	489.76806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GVC(Carbamidomethyl (C))STLTIK_	ENST00000589011.1_1_7:20201474-20224697:-|nuORF	101.25262130126117	0.03792372629710479	2				NaN	NaN	0	NaN	7162	3497	10659
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10662	29.761	NaN	14717	30	0	1980.5	0.106	+			17014	HPTSVISGY	9	70	480.74245248254635	959.4703520318927	2	480.7425231933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HPTSVISGY_	ENSG00000120438|ENST00000321394|TCP1;ENST00000412860.1_1_7:42834686-42835559:+|nuORF;TCP1|p.A232Gfs*7|1|0.05|ENSG00000120438|chr6:159784043-159784044|-/C|frameshift_variant	88.64286706044652	0.06869153472052109	2				NaN	NaN	0	NaN	7163	3497	10659
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10663	29.763	NaN	3813.5	30	0	192.62	0.106			+	7456	DFNHNEPIK	9	67	371.8487054827945	1112.5242870485836	3	371.8494567871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DFNHNEPIK_	REV__DNAH14|p.I2559Nfs*2|1|0.39|ENSG00000185842|chr1:225337448-225337449|-/A|frameshift_variant;REV__DNAH14|p.T2021Hfs*9|1|0.38|ENSG00000185842|chr1:225289906-225289906|A/-|frameshift_variant;REV__ENSG00000185842|ENST00000682510|DNAH14;REV__nc|ENSG00000185842|Q0VDD8-4|DNAH14;REV__nc|ENSG00000185842|Q0VDD8|DNAH14	55.50420428727701	0.2510918378945873	2				NaN	NaN	0	NaN	7164	3497	10659
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10664	29.764	NaN	9453.4	30	0	886.17	0.106			+	32849	RCRLTAPSY	9	78	562.286907391099	1122.559261848998	2	562.287353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_RC(Carbamidomethyl (C))RLTAPSY_	REV__nc|ENSG00000034677|Q9NV58-2|RNF19A	51.33545320467046	0.2872990594074956	2				NaN	NaN	0	NaN	7165	3497	10659
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10665	29.766	NaN	5592.9	30	0	2548.6	0.035				-1	 	0	72	501.23350684366477	1000.4524607541296	2	501.2337951660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7166	3497	10659
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10666	29.767	NaN	4236.7	30	0	1256.1	0.14				-1	ENNLLMKM	8	66	504.74576389896345	1007.4769748647269	2	504.7458801269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_ENNLLM(Oxidation (M))KM_	ENST00000497851.1_1_7:11075344-11076425:+|nuORF	51.33545320467046	0.5859736979383976	2				NaN	NaN	0	NaN	7167	3497	10659
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10678	29.794	NaN	37966	30	0	9733.9	0.214				-1	 	0	81	464.2602807625617	926.5060085919234	2	464.26055908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7176	3500	10677
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10679	29.798	NaN	19495	30	0	2247.7	0.106	+			25825	LSDKRDKY	8	77	512.7740746241956	1023.5335963151912	2	512.7747802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSDKRDKY_	ENST00000366730.5_1_1:228327667-228327715:+|nuORF	77.31757898189308	0.345924878368729	2				NaN	NaN	0	NaN	7177	3500	10677
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10680	29.8	NaN	17438	30	0	4371.5	0.106	+			15514	GVCSTLTIK	9	74	489.7673122773621	977.5200716215243	2	489.76776123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_GVC(Carbamidomethyl (C))STLTIK_	ENST00000589011.1_1_7:20201474-20224697:-|nuORF	101.25262130126117	0.03792372629710479	2				NaN	NaN	0	NaN	7178	3500	10677
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10681	29.802	NaN	28805	30	0	15541	0.106				-1	 	0	70	468.76062150785157	935.5066900825032	2	468.7607727050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7179	3500	10677
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10682	29.803	NaN	10524	30	0	1546	0.106	+			49935	VYVKHSISF	9	63	360.5340338701356	1078.5802722106068	3	360.5342712402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VYVKHSISF_	ENSG00000185009|ENST00000355264|AP3M1	31.954861631926434	0.5046124803899898	2				NaN	NaN	0	NaN	7180	3500	10677
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10683	29.805	NaN	6712	30	0	814.19	0.037	+			6793	CFRAALGGVKE	11	83	575.8062462363295	NaN	0	575.8057861328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_CFRAALGGVKE_	ENST00000441363.1_1_6:74009094-74009619:+|nuORF	43.650786325866115	0.3609211547700893	2				NaN	NaN	0	NaN	7181	3500	10677
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10684	29.806	NaN	8973.5	30	0	765.47	0.141	+			37455	SLILYATETL	10	85	562.3159798237359	1122.6174067142717	2	562.3170776367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SLILYATETL_	sp|P09719|US14_HCMVAUncharacterizedproteinHVLF4OS=Humancytomegalovirus(strainAD169)OX=10360GN=US14PE=3SV=2	26.69291269510374	0.6618461711292317	2				NaN	NaN	0	NaN	7182	3500	10677
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10695	29.833	NaN	10325	30	0	1959.2	0.214			+	18561	ISNMDLSRS	9	90	511.7497723778144	1021.4849918224288	2	511.75042724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ISNMDLSRS_	REV__ENST00000396270.3_1_12:69099864-69100302:+|nuORF	65.46538089061403	0.16805504838372562	2				NaN	NaN	0	NaN	7190	3503	10694
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10696	29.836	NaN	15415	30	0	2450	0.106				-1	 	0	75	580.782248287387	1159.549943641574	2	580.7827758789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7191	3503	10694
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10697	29.838	NaN	9242.8	30	0	2945.6	0.106			+	-1	SAAMLLACVT	10	68	498.2499414175501	994.4853299019002	2	498.2506103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_SAAM(Oxidation (M))LLACVT_	REV__ENSG00000171014|ENST00000307033|OR4D5	25.57405402267927	0.6709832231498071	2				NaN	NaN	0	NaN	7192	3503	10694
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10698	29.84	NaN	8325.9	30	0	900.13	0.106	+			50502	YANIGKTL	8	71	440.2498882368967	878.4852235405934	2	440.2499694824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YANIGKTL_	ENSG00000115841|ENST00000354545|RMDN2;ENST00000440353.5_1_2:38177721-38224681:+|nuORF;nc|ENSG00000115841|Q96LZ7-2|RMDN2;nc|ENSG00000115841|Q96LZ7-3|RMDN2;nc|ENSG00000115841|Q96LZ7-4|RMDN2;RMDN2|p.F331Efs*33|1|0.12|ENSG00000115841|chr2:37997459-37997462|TGTT/-|frameshift_variant	75.04331003522576	0.3648751570195447	2				NaN	NaN	0	NaN	7193	3503	10694
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10699	29.842	NaN	5749.5	30	0	543.34	0.106	+			26254	LSSSTEVVVMV	11	75	575.8062462363295	NaN	0	575.8057250976562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSSSTEVVVMV_	ENSG00000196159|ENST00000394329|FAT4;FAT4|p.A2521Sfs*37|1|0.11|ENSG00000196159|chr4:125448571-125448572|-/G|frameshift_variant;FAT4|p.D3606Sfs*31|1|0.07|ENSG00000196159|chr4:125451831-125451832|-/AGTAAAGG|frameshift_variant;FAT4|p.E3388Gfs*4|1|0.35|ENSG00000196159|chr4:125451179-125451179|A/-|frameshift_variant;FAT4|p.E4539Rfs*31|1|0.12|ENSG00000196159|chr4:125490431-125490431|C/-|frameshift_variant;FAT4|p.K4477Rfs*15|1|0.36|ENSG00000196159|chr4:125490247-125490247|G/-|frameshift_variant;FAT4|p.K4532Efs*21|1|0.37|ENSG00000196159|chr4:125490410-125490411|-/G|frameshift_variant;FAT4|p.K4532Rfs*38|1|0.19|ENSG00000196159|chr4:125490411-125490411|G/-|frameshift_variant;FAT4|p.L3734Ffs*22|1|0.27|ENSG00000196159|chr4:125452211-125452212|-/T|frameshift_variant;FAT4|p.L3734Yfs*8|2|0.3|ENSG00000196159|chr4:125452212-125452212|T/-|frameshift_variant;FAT4|p.Q4906Rfs*14|1|0.49|ENSG00000196159|chr4:125491536-125491536|C/-|frameshift_variant;FAT4|p.T3555Pfs*6|1|0.21|ENSG00000196159|chr4:125451679-125451679|A/-|frameshift_variant;nc|ENSG00000196159|Q6V0I7-2|FAT4;nc|ENSG00000196159|Q6V0I7-3|FAT4;nc|ENSG00000196159|Q6V0I7|FAT4	39.252832667884924	0.39048276625972167	2				NaN	NaN	0	NaN	7194	3503	10694
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10700	29.844	NaN	2802.5	30	0	280.29	0.036	+			48177	VTADGALAMEK	11	70	553.2804274214199	1104.5463019096396	2	553.2824096679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTADGALAMEK_	ENSG00000058085|ENST00000264144|LAMC2;nc|ENSG00000058085|Q13753-2|LAMC2	50.79123845855914	0.4102859592092987	2				NaN	NaN	0	NaN	7195	3503	10694
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10701	29.844	NaN	5581	30	0	2048.7	0.141	+			31039	QEVKVQTAAL	10	66	543.8108877859352	1085.6072226386702	2	543.8113403320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QEVKVQTAAL_	ENSG00000102753|ENST00000261667|KPNA3;ENSG00000186432|ENST00000334256|KPNA4;KPNA3|p.N437Tfs*3|2|0.41|ENSG00000102753|chr13:49705683-49705683|T/-|frameshift_variant;KPNA4|p.M441Wfs*9|1|0.12|ENSG00000186432|chr3:160508158-160508158|T/-|frameshift_variant	101.45984612302182	0.07336148045341315	2				NaN	NaN	0	NaN	7196	3503	10694
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10716	29.877	NaN	9579.8	30	0	2552.4	0.214				-1	 	0	67	422.2680662360797	842.5215795389594	2	422.2685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7208	3506	10715
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10717	29.881	NaN	5167.4	30	0	764.31	0.106	+			18266	IPENRVVSY	9	71	538.7898600543994	1075.5651671755986	2	538.7904052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IPENRVVSY_	ENSG00000106178|ENST00000222902|CCL24	63.53385203322761	0.18415635464017938	2				NaN	NaN	0	NaN	7209	3506	10715
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10718	29.883	NaN	5540.6	30	0	603.69	0.106	+			51193	YPLEGSRSY	9	71	536.2594102472258	NaN	0	536.2593383789062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YPLEGSRSY_	ENSG00000170677|ENST00000397942|SOCS6	74.25504064058377	0.09106938647426577	2				NaN	NaN	0	NaN	7210	3506	10715
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10719	29.885	NaN	7497.9	30	0	4436.3	0.106	+			294	AAPFRSAL	8	50	416.73688902857555	831.4592251239511	2	416.7374267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AAPFRSAL_	ENSG00000110680|ENST00000331587|CALCA;ENSG00000175868|ENST00000324229|CALCB;nc|ENSG00000110680|P01258-2|CALCA;nc|ENSG00000110680|P06881|CALCA	55.50420428727701	0.5462892107279674	2				NaN	NaN	0	NaN	7211	3506	10715
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10720	29.886	NaN	3894.1	30	0	423.23	0.106	+			38463	SSASALTGLTK	11	78	518.2880163837915	NaN	0	518.2879028320312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSASALTGLTK_	ENSG00000164880|ENST00000404767|INTS1;INTS1|p.Q467Afs*140|1|0.05|ENSG00000164880|chr7:1498439-1498440|-/A|frameshift_variant;INTS1|p.R843Pfs*31|1|0.39|ENSG00000164880|chr7:1487438-1487439|-/G|frameshift_variant	75.65223720490533	0.10344861365078342	2				NaN	NaN	0	NaN	7212	3506	10715
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10721	29.888	NaN	4564.6	30	0	403.03	0.037	+			8942	EEYNNKVQL	9	64	568.7826097848027	1135.5506666364054	2	568.7833862304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EEYNNKVQL_	ENSG00000136485|ENST00000614556|DCAF7	74.25504064058377	0.12238981753128622	2				NaN	NaN	0	NaN	7213	3506	10715
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10722	29.889	NaN	2654.5	30	0	478.01	0.14			+	29721	PHLLCLPL	8	59	453.2680526065638	904.5215522799276	2	453.2685241699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PHLLCLPL_	REV__CMIP|p.R372C|1|0.25|ENSG00000153815|chr16:81678354-81678354|C/T|missense_variant	24.504012794735996	0.7701314986472447	2				NaN	NaN	0	NaN	7214	3506	10715
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10733	29.916	NaN	14781	30	0	2183.3	0.214	+			17716	IENGKVVSI	9	76	479.7815527058117	957.5485524784234	2	479.7815246582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IENGKVVSI_	ENSG00000176658|ENST00000318217|MYO1D	128.60217544463768	0.015992218256422188	2				NaN	NaN	0	NaN	7222	3509	10732
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10734	29.919	NaN	8268.5	30	0	1497.5	0.106	+			47493	VQGVISVPK	9	72	463.7866370913741	925.5587212495482	2	463.78668212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VQGVISVPK_	ENSG00000168237|ENST00000436784|GLYCTK;nc|ENSG00000168237|Q8IVS8-2|GLYCTK;nc|ENSG00000168237|Q8IVS8-3|GLYCTK;nc|ENSG00000168237|Q8IVS8-4|GLYCTK;nc|ENSG00000168237|Q8IVS8-7|GLYCTK	91.26522074875469	0.06129826844580791	2				NaN	NaN	0	NaN	7223	3509	10732
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10735	29.921	NaN	9317.5	30	0	4089.4	0.106	+			12224	GASDVVLYK	9	76	476.2606076135194	NaN	0	476.2604675292969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GASDVVLYK_	ENSG00000116120|ENST00000281828|FARSB;FARSB|p.I265*|1|0.36|ENSG00000116120|chr2:222630168-222630168|T/-|frameshift_variant;FARSB|p.I364Nfs*7|1|0.04|ENSG00000116120|chr2:222624353-222624354|-/AACACTCCTTATTG|frameshift_variant	118.74307786436346	0.002324367518139777	2				NaN	NaN	0	NaN	7224	3509	10732
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10736	29.923	NaN	11793	30	0	1678.4	0.106				-1	 	0	70	469.2890802413188	936.5636075494376	2	469.2891845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7225	3509	10732
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10737	29.925	NaN	6127	30	0	587.99	0.106	+			698	AEALVSKGL	9	63	444.2633067534586	NaN	0	444.2630920410156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEALVSKGL_	ENSG00000197157|ENST00000354725|SND1;GAS2L3-SND1|1|fusion;SND1|p.A514Qfs*156|1|0.37|ENSG00000197157|chr7:127929195-127929195|A/-|frameshift_variant	88.17693792209575	0.04527150213038833	2				NaN	NaN	0	NaN	7226	3509	10732
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10738	29.927	NaN	5819.1	30	0	945.44	0.034				-1	 	0	67	483.2680160814014	964.5214792296028	2	483.2686767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7227	3509	10732
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10739	29.927	NaN	5964.9	30	0	748.99	0.139	+			7173	DAGMAPRLL	9	71	472.25473220899937	942.4949114847988	2	472.2547302246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DAGMAPRLL_	ENST00000446816.1_1_2:96874348-96906424:+|nuORF	42.396135135203025	0.392153681582562	2				NaN	NaN	0	NaN	7228	3509	10732
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10751	29.954	NaN	40515	30	0	5786.6	0.214				-1	 	0	74	461.7346630658902	921.4547731985804	2	461.73492431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7237	3512	10750
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10752	29.958	NaN	5522.7	30	0	677.97	0.106	+			25523	LPTENVDKM	9	72	523.7624850615728	1045.5104171899454	2	523.7633056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LPTENVDKM_	ENSG00000198420|ENST00000479870|TCAF1;ENST00000392900.3_1_7:143551228-143582358:-|nuORF;ENST00000414990.2_3_7:143295168-143301929:+|nuORF;nc|ENSG00000198420|Q9Y4C2-2|TCAF1	129.42129120953632	0.01549634589885217	2				NaN	NaN	0	NaN	7238	3512	10750
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10753	29.96	NaN	11736	30	0	1270.6	0.106	+			12552	GEGHFGKVEL	10	79	536.7740727875371	1071.533592641874	2	536.7750244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEGHFGKVEL_	ENSG00000162434|ENST00000342505|JAK1;ENST00000481702.1_1_1:65305238-65306936:-|nuORF	91.26522074875469	0.12383023862516404	2				NaN	NaN	0	NaN	7239	3512	10750
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10754	29.962	NaN	3800.8	30	0	292.52	0.106	+			34783	RYLDKTEQW	9	78	619.8123083722674	1237.6100638113346	2	619.8121337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RYLDKTEQW_	CON__P01030;ENSG00000224389|ENST00000435363|C4B;ENSG00000244731|ENST00000428956|C4A;nc|ENSG00000244731|P0C0L4-2|C4A	117.81106730687013	0.02252488733980868	2				NaN	NaN	0	NaN	7240	3512	10750
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10755	29.964	NaN	3088.4	30	0	296.76	0.106			+	-1	DSHSPCLSY	9	72	533.2193216341532	1064.4240903351063	2	533.2213134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_DSHSPC(Carbamidomethyl (C))LSY_	REV__ENSG00000100150|ENST00000651528|DEPDC5;REV__nc|ENSG00000100150|O75140-1|DEPDC5;REV__nc|ENSG00000100150|O75140-4|DEPDC5;REV__nc|ENSG00000100150|O75140-5|DEPDC5;REV__nc|ENSG00000100150|O75140-6|DEPDC5;REV__nc|ENSG00000100150|O75140-8|DEPDC5;REV__nc|ENSG00000100150|O75140-9|DEPDC5	30.503639358989545	0.5181749237905803	2				NaN	NaN	0	NaN	7241	3512	10750
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10756	29.965	NaN	4958.3	30	0	2620.1	0.106			+	51087	YLRFDEES	8	63	529.7435337047983	1057.4725144763966	2	529.7448120117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YLRFDEES_	REV__ENSG00000181396|ENST00000313056|OGFOD3;REV__nc|ENSG00000181396|Q6PK18-2|OGFOD3	38.80614096846853	0.6637206697844082	2				NaN	NaN	0	NaN	7242	3512	10750
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10757	29.967	NaN	5628.2	30	0	423.46	0.033				-1	GAGIRCKI	8	65	437.75141479085875	NaN	0	437.75262451171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_GAGIRC(Carbamidomethyl (C))KI_	AKR1E2|p.E45G|1|0.07|ENSG00000165568|chr10:4830769-4830769|A/G|missense_variant;ENSG00000165568|ENST00000298375|AKR1E2;ENST00000525281.5_1_10:4868459-4888008:+|nuORF;nc|ENSG00000165568|Q96JD6-2|AKR1E2;nc|ENSG00000165568|Q96JD6-3|AKR1E2;nc|ENSG00000165568|Q96JD6-4|AKR1E2;nc|ENSG00000165568|Q96JD6-5|AKR1E2	54.76467175910256	1.7418937515398478	2				NaN	NaN	0	NaN	7243	3512	10750
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10769	29.993	NaN	87786	30	0	33108	0.214				-1	 	0	80	439.2602131852731	876.5058734373462	2	439.26068115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7252	3515	10768
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10770	29.996	NaN	3595.2	30	0	424.13	0.106	+			1200	AEQAKEIQL	9	69	515.2822554376569	1028.5499579421137	2	515.282470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEQAKEIQL_	ENSG00000073350|ENST00000392550|LLGL2;ENST00000545227.6_1_17:73554011-73570984:+|nuORF;nc|ENSG00000073350|Q6P1M3-2|LLGL2	54.722347961057174	0.257609425301511	2				NaN	NaN	0	NaN	7253	3515	10768
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10771	29.998	NaN	5047.2	30	0	923.44	0.106			+	8534	EAVELHNNL	9	60	519.7638231756454	1037.5130934180906	2	519.7647094726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EAVELHNNL_	REV__MIB1|p.V645L|1|0.05|ENSG00000101752|chr18:21838468-21838468|G/T|missense_variant	56.72105179125745	0.24094814563026265	2				NaN	NaN	0	NaN	7254	3515	10768
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10772	30	NaN	4608.9	30	0	544.66	0.106			+	28676	NLVNVWEV	8	68	486.7605725239661	971.5065921147323	2	486.76092529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NLVNVWEV_	REV__ENSG00000107679|ENST00000368990|PLEKHA1;REV__nc|ENSG00000107679|Q9HB21-2|PLEKHA1	53.351449002276354	0.5676011784961348	2				NaN	NaN	0	NaN	7255	3515	10768
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10773	30.002	NaN	3109.9	30	0	597.23	0.106				-1	 	0	47	433.24205301379885	864.4695530943977	2	433.2425231933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7256	3515	10768
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10774	30.004	NaN	4443.2	30	0	634.83	0.035	+			19190	IYTQERDP	8	66	511.2508318319063	NaN	0	511.25079345703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IYTQERDP_	ENST00000381279.3_1_6:139981105-139981588:+|nuORF	58.78195531508484	1.7418937515398478	2				NaN	NaN	0	NaN	7257	3515	10768
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10775	30.004	NaN	4031.7	30	0	1017.6	0.141			+	-1	FNWILPCGP	9	74	552.271658364908	1102.528763796616	2	552.2728271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_FNWILPC(Carbamidomethyl (C))GP_	REV__chr19:41720208-41727234|446|19.03|0.88|4.44|+|1|CEACAM5,CEACAM5|2	44.53106598305862	0.36711179743858174	2				NaN	NaN	0	NaN	7258	3515	10768
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10787	30.032	NaN	11717	30	0	1244.1	0.215	+			40473	STWEGIQAGK	10	78	538.7706771122575	1075.526801291315	2	538.7716064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STWEGIQAGK_	ENSG00000177156|ENST00000319006|TALDO1;ENST00000530119.5_1_11:747481-760254:+|nuORF;ENST00000533796.1_1_11:755745-760254:+|nuORF;nc|ENSG00000177156|P37837-2|TALDO1	50.033510581677724	0.4566913063131936	2				NaN	NaN	0	NaN	7267	3518	10786
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10788	30.035	NaN	2515.7	30	0	1291.8	0.106				-1	ALMAVVLRAA	10	35	344.20736358307465	1029.600261349424	3	344.20721435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_ALM(Oxidation (M))AVVLRAA_	ENSG00000161653|ENST00000293404|NAGS	29.170058357718403	0.6416167986984785	2				NaN	NaN	0	NaN	7268	3518	10786
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10789	30.037	NaN	3568.3	30	0	1145.8	0.106	+			39129	SSVFLAIKK	9	41	331.5425105348258	991.6057022046774	3	331.5428161621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSVFLAIKK_	ENST00000274030.10_1_4:120160492-120160642:+|nuORF	40.77816245573522	0.41113185337114944	2				NaN	NaN	0	NaN	7269	3518	10786
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10790	30.039	NaN	7869	30	0	1953.2	0.106	+			15729	GVSAAFAVK	9	61	425.24430853662676	848.4740641400535	2	425.24493408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GVSAAFAVK_	BZW1|p.L189P|1|0.05|ENSG00000082153|chr2:200818001-200818001|T/C|missense_variant;BZW1|p.N285Tfs*11|2|0.26|ENSG00000082153|chr2:200818782-200818782|A/-|frameshift_variant;BZW1|p.N286*|1|0.04|ENSG00000082153|chr2:200818790-200818791|-/T|frameshift_variant;BZW1|p.S325Rfs*19|1|0.04|ENSG00000082153|chr2:200819989-200819990|-/ACAATATAGAA|frameshift_variant;ENSG00000082153|ENST00000409600|BZW1;nc|ENSG00000082153|Q7L1Q6-2|BZW1;nc|ENSG00000082153|Q7L1Q6-3|BZW1;nc|ENSG00000082153|Q7L1Q6-4|BZW1	148.04295825190792	0.0073252839830139265	2				NaN	NaN	0	NaN	7270	3518	10786
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10791	30.041	NaN	2604	30	0	332.13	0.106				-1	MPQGQPGLQ	9	68	486.23374521743966	970.4529375016793	2	486.2341003417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_M(Oxidation (M))PQGQPGLQ_	ENSG00000100393|ENST00000263253|EP300	35.61828744233558	0.47037581924408073	2				NaN	NaN	0	NaN	7271	3518	10786
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10792	30.043	NaN	3732.7	30	0	417.62	0.035	+			50917	YGMPSTHAM	9	68	497.7096614158828	993.4047698985656	2	497.71063232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YGMPSTHAM_	ENSG00000163082|ENST00000321276|SGPP2;nc|ENSG00000163082|Q8IWX5-2|SGPP2	30.503639358989545	0.5181749237905803	2				NaN	NaN	0	NaN	7272	3518	10786
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10793	30.043	NaN	2160.3	30	0	281.26	0.139			+	12517	GEEVRTVY	8	65	476.7399650426175	NaN	0	476.73974609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GEEVRTVY_	REV__ARHGEF6|p.T559Nfs*7|1|0.45|ENSG00000129675|chrX:136680759-136680760|-/T|frameshift_variant;REV__ENSG00000129675|ENST00000250617|ARHGEF6;REV__nc|ENSG00000129675|Q15052-2|ARHGEF6	47.91560031466742	1.7418937515398478	2				NaN	NaN	0	NaN	7273	3518	10786
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10805	30.07	NaN	28774	30	0	5557.9	0.214			+	8321	EAKGTVSWK	9	83	503.2713121856197	1004.5280714380394	2	503.271728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EAKGTVSWK_	REV__ENSG00000089225|ENST00000405440|TBX5;REV__nc|ENSG00000089225|Q99593-2|TBX5;REV__nc|ENSG00000089225|Q99593-3|TBX5;REV__TBX5|p.E486*|1|0.4|ENSG00000089225|chr12:114355634-114355635|-/G|frameshift_variant	101.25262130126117	0.03792372629710479	2				NaN	NaN	0	NaN	7282	3521	10804
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10806	30.074	NaN	21585	30	0	3091.8	0.106				-1	 	0	78	410.7186522268202	819.4227515204404	2	410.7190246582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7283	3521	10804
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10807	30.076	NaN	8696.9	30	0	1561.5	0.106	+			41907	SVVGGLAVGK	10	63	443.7712398300743	NaN	0	443.7712707519531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVVGGLAVGK_	ENSG00000103249|ENST00000382745|CLCN7;ENST00000563822.1_1_16:1505719-1509320:-|nuORF;ENST00000564968.1_1_16:1507514-1509320:-|nuORF;nc|ENSG00000103249|P51798-2|CLCN7;RBCK1-CLCN7|1|fusion;RBCK1-CLCN7|2|fusion	51.19269402634007	0.2980620950593832	2				NaN	NaN	0	NaN	7284	3521	10804
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10808	30.077	NaN	15896	30	0	1666.8	0.106	+			457	AAVLRSAAL	9	62	436.2712043705692	870.5278558079384	2	436.27197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AAVLRSAAL_	ENSG00000167741|ENST00000381550|GGT6;nc|ENSG00000167741|Q6P531-2|GGT6;nc|ENSG00000167741|Q6P531|GGT6	77.31757898189308	0.1091473830098891	2				NaN	NaN	0	NaN	7285	3521	10804
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10809	30.079	NaN	4405.5	30	0	414.2	0.106	+			14671	GTIEVSVVK	9	64	466.2777573242333	930.5409617152666	2	466.27679443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTIEVSVVK_	ENSG00000109452|ENST00000262992|INPP4B;ENST00000512630.5_1_4:143191861-143226631:-|nuORF;INPP4B|p.K530Efs*15|1|0.23|ENSG00000109452|chr4:142145972-142145973|-/C|frameshift_variant	65.46538089061403	0.16805504838372562	2				NaN	NaN	0	NaN	7286	3521	10804
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10810	30.081	NaN	4522.9	30	0	524.85	0.106			+	-1	PTAIGAQM	8	53	402.6995287521138	803.3845045710276	2	402.6998596191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_PTAIGAQM(Oxidation (M))_	REV__ENSG00000176155|ENST00000694881|CCDC57;REV__ENST00000584717.1_1_17:80059560-80064242:-|nuORF;REV__nc|ENSG00000176155|Q2TAC2|CCDC57	50.0245360154114	0.5941082100236891	2				NaN	NaN	0	NaN	7287	3521	10804
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10811	30.083	NaN	4312.3	30	0	1261.2	0.037				-1	ASLMGSLRHC	10	43	377.8522167359889	1130.5348208081668	3	377.85272216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_ASLMGSLRHC(Carbamidomethyl (C))_	OR5M10|p.N139Qfs*27|1|0.05|ENSG00000254834|chr11:56577307-56577308|-/TGTAGTTG|frameshift_variant	38.753607047826485	0.5606299674732264	2				NaN	NaN	0	NaN	7288	3521	10804
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10823	30.108	NaN	26912	30	0	5304.2	0.214				-1	 	0	87	565.8131275527795	1129.611702172359	2	565.8143310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7297	3524	10822
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10824	30.112	NaN	8717	30	0	2962.9	0.106	+			16796	HPDEKSIITY	10	75	601.8060588924541	1201.597564851708	2	601.8062744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HPDEKSIITY_	ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1;SPTBN1|p.K503Rfs*24|1|0.06|ENSG00000115306|chr2:54626095-54626095|G/-|frameshift_variant	96.0336014099291	0.09653029772959643	2				NaN	NaN	0	NaN	7298	3524	10822
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10825	30.114	NaN	16067	30	0	3218.5	0.106			+	18631	ISTEVEEAI	9	74	495.7532747704361	989.4919966076723	2	495.75384521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ISTEVEEAI_	REV__ASXL3|p.P2037Hfs*43|1|0.33|ENSG00000141431|chr18:33745951-33745951|C/-|frameshift_variant;REV__ASXL3|p.V876Cfs*59|3|0.42|ENSG00000141431|chr18:33740022-33740022|A/-|frameshift_variant;REV__ENSG00000141431|ENST00000269197|ASXL3	58.78195531508484	0.22376836668196862	2				NaN	NaN	0	NaN	7299	3524	10822
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10826	30.116	NaN	10245	30	0	1471.2	0.106				-1	 	0	76	519.7762318969021	1037.5379108606041	2	519.7769165039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7300	3524	10822
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10827	30.118	NaN	3804.4	30	0	789.26	0.106			+	-1	EMSNRGNL	8	62	468.7136365192429	935.4127201052859	2	468.7137756347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_EM(Oxidation (M))SNRGNL_	REV__ENSG00000140297|ENST00000396065|GCNT3	33.51558372728122	0.7005509609380386	2				NaN	NaN	0	NaN	7301	3524	10822
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10828	30.119	NaN	3777.8	30	0	777.76	0.034	+			46882	VIMTSGPLK	9	64	473.2752231981127	944.5358934630254	2	473.2751770019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VIMTSGPLK_	ENSG00000175727|ENST00000319080|MLXIP;ENST00000535996.1_12:122619796-122620072:+|nuORF;ENST00000541750.1_12:122618368-122620257:+|nuORF;MLXIP|p.V645Rfs*84|1|0.4|ENSG00000175727|chr12:122135561-122135562|-/C|frameshift_variant;nc|ENSG00000175727|Q9HAP2-2|MLXIP;nc|ENSG00000175727|Q9HAP2-4|MLXIP	39.252832667884924	0.4290233611298554	2				NaN	NaN	0	NaN	7302	3524	10822
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10829	30.12	NaN	4629.7	30	0	502.55	0.139	+			12928	GESLKLKVV	9	75	486.80725011431656	971.5999472954331	2	486.80767822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GESLKLKVV_	ENSG00000143155|ENST00000367833|TIPRL;nc|ENSG00000143155|O75663-2|TIPRL;TIPRL|p.F156Lfs*13|1|0.33|ENSG00000143155|chr1:168191448-168191448|T/-|frameshift_variant	75.04331003522576	0.118981335847003	2				NaN	NaN	0	NaN	7303	3524	10822
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10842	30.149	NaN	20281	30	0	3728.2	0.214	+			6108	AVNNMFVSK	9	97	505.25973814760727	1008.5049233620146	2	505.26019287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVNNMFVSK_	ENSG00000100744|ENST00000555181|GSKIP	138.06239232086	0.011389075116295402	2				NaN	NaN	0	NaN	7313	3527	10841
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10843	30.153	NaN	32120	30	0	20345	0.106				-1	 	0	63	501.23350684366477	1000.4524607541296	2	501.2337646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7314	3527	10841
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10844	30.155	NaN	37936	30	0	5853.1	0.106	+			5099	ATSPALFNR	9	84	488.76389270693255	NaN	0	488.7636413574219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATSPALFNR_	DYNC1H1|p.K3112Hfs*3|1|0.31|ENSG00000197102|chr14:102027998-102027999|-/TCACAAG|frameshift_variant;DYNC1H1|p.R3078W|1|0.11|ENSG00000197102|chr14:102027802-102027802|C/T|missense_variant;DYNC1H1|p.W4201Gfs*43|1|0.42|ENSG00000197102|chr14:102043958-102043958|G/-|frameshift_variant;ENSG00000197102|ENST00000360184|DYNC1H1	112.41091882917199	0.007519870935348052	2				NaN	NaN	0	NaN	7315	3527	10841
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10845	30.156	NaN	70213	30	0	16121	0.106	+			48298	VTEGSFVYK	9	92	515.2658390367961	1028.5171251403922	2	515.26611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTEGSFVYK_	ENSG00000057608|ENST00000380191|GDI2;GDI2|p.S222Afs*20|1|0.1|ENSG00000057608|chr10:5785197-5785197|T/-|frameshift_variant	195.06343300570734	5.420119182691198E-05	2				NaN	NaN	0	NaN	7316	3527	10841
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10846	30.158	NaN	52313	30	0	9129.5	0.106			+	44201	TRGKGRAGYT	10	82	533.7918068489096	1065.569060764619	2	533.7928466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TRGKGRAGYT_	REV__ENSG00000075856|ENST00000546815|SART3;REV__nc|ENSG00000075856|Q15020-4|SART3	77.31757898189308	0.2175361111083648	2				NaN	NaN	0	NaN	7317	3527	10841
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10847	30.16	NaN	15302	30	0	3659.3	0.036	+			38488	SSATLNSIVAK	11	71	545.807692122735	1089.60083131227	2	545.808837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSATLNSIVAK_	ENSG00000007944|ENST00000356840|MYLIP;MYLIP|p.K199Rfs*26|1|0.07|ENSG00000007944|chr6:16143150-16143151|-/GAATT|frameshift_variant;MYLIP|p.R317Kfs*8|1|0.09|ENSG00000007944|chr6:16145014-16145015|-/A|frameshift_variant	93.44185321454538	0.08468467990978058	2				NaN	NaN	0	NaN	7318	3527	10841
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10848	30.161	NaN	14021	30	0	1297.7	0.142	+			8563	EAWASKDATY	10	72	571.2608227867288	1140.5070926402575	2	571.2616577148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EAWASKDATY_	ENSG00000166508|ENST00000303887|MCM7;nc|ENSG00000166508|P33993-3|MCM7	195.57289506066198	6.77468932343411E-06	2				NaN	NaN	0	NaN	7319	3527	10841
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10860	30.188	NaN	12992	30	0	2927.4	0.214	+			1931	AISEYIATK	9	71	498.2735575581482	994.5325621830964	2	498.2738342285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AISEYIATK_	ENSG00000095002|ENST00000233146|MSH2;MSH2|p.M813Nfs*11|1|0.17|ENSG00000095002|chr2:47478497-47478498|-/A|frameshift_variant;MSH2|p.T806Kfs*4|1|0.2|ENSG00000095002|chr2:47478472-47478478|CACTCAC/-|frameshift_variant;nc|ENSG00000095002|P43246-2|MSH2	141.52041321563706	0.009766778904176347	2				NaN	NaN	0	NaN	7328	3530	10859
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10861	30.192	NaN	5262.6	30	0	3818.3	0.106				-1	 	0	48	343.1987130275146	684.3828731218292	2	343.1988525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7329	3530	10859
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10862	30.194	NaN	14146	30	0	2289.7	0.106	+			8226	EAENRVKL	8	76	479.76881796847937	957.5230830037588	2	479.769287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EAENRVKL_	tr|U7T3Z3|U7T3Z3_FUSNUBand7domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00313PE=4SV=1	84.9155231211612	0.2928622555056503	2				NaN	NaN	0	NaN	7330	3530	10859
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10863	30.195	NaN	8463.8	30	0	2573.1	0.106	+			4431	ATIENSRIVLQ	11	54	415.2382660531582	1242.6929687596746	3	415.2382507324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATIENSRIVLQ_	CON__P08727;ENSG00000171345|ENST00000361566|KRT19	27.64392233501311	0.6998289966465058	2				NaN	NaN	0	NaN	7331	3530	10859
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10864	30.197	NaN	7006.6	30	0	1029.7	0.106			+	22041	KSIPLTYAR	9	73	524.8103773965848	1047.6062018599696	2	524.8114624023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KSIPLTYAR_	REV__ENSG00000166262|ENST00000299338|FAM227B	77.31757898189308	0.1091473830098891	2				NaN	NaN	0	NaN	7332	3530	10859
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10865	30.199	NaN	2542.5	30	0	428.23	0.035	+			17558	IDYNTGGML	9	63	492.2282655448378	982.4419781564757	2	492.2283630371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IDYNTGGML_	tr|U7SQH7|U7SQH7_FUSNUProteinkinasedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01642PE=4SV=1	37.15910966729921	0.4535818937225704	2				NaN	NaN	0	NaN	7333	3530	10859
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10866	30.2	NaN	2947.5	30	0	1021.2	0.144			+	1247	AERPHVLAGR	10	49	369.21269043101313	1104.6162418932395	3	369.21319580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AERPHVLAGR_	REV__ENST00000441290.6_1_7:114296499-114304492:+|nuORF	25.125986553469783	0.6746423231557295	2				NaN	NaN	0	NaN	7334	3530	10859
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10878	30.227	NaN	13554	30	0	1850.7	0.214				-1	 	0	74	414.2522693077549	826.4899856823098	2	414.2523498535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7343	3533	10877
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10879	30.231	NaN	13759	30	0	3592.7	0.106	+			3341	ASMPVDIAK	9	76	466.248945080301	930.483337227402	2	466.24945068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASMPVDIAK_	ENSG00000108528|ENST00000225665|SLC25A11;ENST00000574710.1_1_17:4841038-4842521:-|nuORF;nc|ENSG00000108528|Q02978-2|SLC25A11	63.53385203322761	0.18415635464017938	2				NaN	NaN	0	NaN	7344	3533	10877
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10880	30.233	NaN	12316	30	0	3618.5	0.106	+			30957	QENSRVIVM	9	83	538.2813869220661	1074.548220910932	2	538.2825317382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QENSRVIVM_	ENSG00000111679|ENST00000318974|PTPN6;ENSG00000179295|ENST00000351677|PTPN11;ENST00000416215.6_1_12:7061038-7070080:+|nuORF;ENST00000511359.1_1_5:23303923-23304922:-|nuORF;nc|ENSG00000111679|P29350-2|PTPN6;nc|ENSG00000111679|P29350-3|PTPN6;nc|ENSG00000111679|P29350-4|PTPN6;nc|ENSG00000179295|Q06124-1|PTPN11;nc|ENSG00000179295|Q06124-3|PTPN11	84.9155231211612	0.07920012719736333	2				NaN	NaN	0	NaN	7345	3533	10877
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10881	30.234	NaN	27085	30	0	3894.5	0.106	+			8188	EAAVAIKAM	9	83	452.251817045221	902.489081157242	2	452.2520446777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EAAVAIKAM_	ENSG00000132507|ENST00000336458|EIF5A;ENSG00000253626|ENST00000520547|EIF5AL1;nc|ENSG00000132507|P63241-2|EIF5A	176.41073772950895	0.0016726359177844747	2				NaN	NaN	0	NaN	7346	3533	10877
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10882	30.236	NaN	8994	30	0	3619.3	0.106			+	17521	IDLGSFLKR	9	47	350.2096673432614	1047.6071726299842	3	350.20989990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IDLGSFLKR_	REV__tr|U7T5C5|U7T5C5_FUSNUAAA-ATPase-likedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00520PE=4SV=1	15.641811463095205	0.6112419832031292	2				NaN	NaN	0	NaN	7347	3533	10877
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10883	30.238	NaN	2192.8	30	0	447.86	0.036			+	-1	DGCVFTNKK	9	47	356.8424869824339	1067.5056315475017	3	356.84283447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_DGC(Carbamidomethyl (C))VFTNKK_	REV__tr|U7T245|U7T245_FUSNUUDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanineligaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=murFPE=3SV=1	31.529811441608018	0.5085848003137583	2				NaN	NaN	0	NaN	7348	3533	10877
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10884	30.239	NaN	3077.2	30	0	239.23	0.139			+	10355	ETVINVLR	8	63	472.28359996369903	NaN	0	472.2823791503906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ETVINVLR_	REV__ENSG00000155100|ENST00000404789|OTUD6B;REV__nc|ENSG00000155100|Q8N6M0-2|OTUD6B	54.776311868738084	1.7418937515398478	2				NaN	NaN	0	NaN	7349	3533	10877
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10896	30.266	NaN	94650	30	0	56952	0.214	+			40734	SVCVLDLRK	9	96	363.8738685011677	1088.599776103703	3	363.87420654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SVC(Carbamidomethyl (C))VLDLRK_	ENSG00000101849|ENST00000645353|TBL1X;ENSG00000177565|ENST00000457928|TBL1XR1;nc|ENSG00000101849|O60907-2|TBL1X;TBL1X|p.G568S|1|0.45|ENSG00000101849|chrX:9714998-9714998|G/A|missense_variant	78.26377905018397	0.10505600812668463	2				NaN	NaN	0	NaN	7358	3536	10895
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10897	30.269	NaN	16395	30	0	1697.3	0.106				-1	 	0	71	523.2972998140012	1044.5800466948024	2	523.298095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7359	3536	10895
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10898	30.271	NaN	15681	30	0	3614.6	0.106	+			18620	ISSMSLVIQ	9	80	489.27196394449135	976.5293749557827	2	489.2727966308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ISSMSLVIQ_	ENST00000266771.9_1_12:129278384-129278573:-|nuORF	68.78682469695295	0.14603441672067394	2				NaN	NaN	0	NaN	7360	3536	10895
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10899	30.273	NaN	10308	30	0	1572	0.106	+			14679	GTIGDMMQK	9	72	490.7297807489522	979.4450085647044	2	490.7301330566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTIGDMMQK_	ENSG00000107874|ENST00000369937|CUEDC2;ENST00000477994.1_1_10:104183924-104192326:-|nuORF	132.757866228626	0.013877640931359021	2				NaN	NaN	0	NaN	7361	3536	10895
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10900	30.275	NaN	3356.6	30	0	197.75	0.106	+			37917	SPDGRTYYY	9	69	561.2485832382588	1120.4826135433175	2	561.2494506835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SPDGRTYYY_	ENSG00000196504|ENST00000545856|PRPF40A;ENST00000467114.2_1_2:153535806-153549567:-|nuORF;nc|ENSG00000196504|O75400-2|PRPF40A;nc|ENSG00000196504|O75400-3|PRPF40A;nc|ENSG00000196504|O75400|PRPF40A;PRPF40A|p.K411Sfs*40|2|0.19|ENSG00000196504|chr2:152672597-152672597|T/-|frameshift_variant;PRPF40A|p.Q412Afs*4|1|0.16|ENSG00000196504|chr2:152672596-152672597|-/T|frameshift_variant	52.936696900407355	0.27249468807391813	2				NaN	NaN	0	NaN	7362	3536	10895
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10901	30.277	NaN	7478.8	30	0	1548	0.038			+	-1	LSFYLYLCV	9	54	393.20327334006356	1176.5879906203907	3	393.2034606933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_LSFYLYLC(Carbamidomethyl (C))V_	REV__ANO10|p.C325Y|1|0.22|ENSG00000160746|chr3:43576880-43576880|C/T|missense_variant	35.61828744233558	0.47037581924408073	2				NaN	NaN	0	NaN	7363	3536	10895
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10902	30.277	NaN	4882.5	30	0	503.89	0.142				-1	LWVTERLPM	9	60	387.5419751149425	1159.6040959450274	3	387.54156494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_LWVTERLPM(Oxidation (M))_	ENSG00000173898|ENST00000533211|SPTBN2;nc|ENSG00000173898|O15020-2|SPTBN2	37.81151784470057	0.4459294069877048	2				NaN	NaN	0	NaN	7364	3536	10895
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10913	30.304	NaN	45114	30	0	8299.4	0.214	+			50559	YAVEGRDL	8	102	461.73468426580905	921.4548155984181	2	461.73480224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YAVEGRDL_	ENSG00000163479|ENST00000295702|SSR2;ENST00000368311.5_1_1:155984733-155990735:-|nuORF;ENST00000472898.5_1_1:155981561-155990687:-|nuORF;ENST00000484320.6_1_1:155988041-155990687:-|nuORF;ENST00000532074.5_1_1:155984857-155990687:-|nuORF	104.74654710444128	0.24806011021879068	2				NaN	NaN	0	NaN	7372	3539	10912
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10914	30.308	NaN	23308	30	0	9314	0.106	+			31270	QHSSLCKTY	9	74	533.7521502893802	1065.4897476455603	2	533.7532348632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QHSSLCKTY_	ENSG00000174145|ENST00000309447|NWD2;NWD2|p.D1262Gfs*18|1|0.39|ENSG00000174145|chr4:37445769-37445770|-/G|frameshift_variant;NWD2|p.E713Rfs*7|1|0.36|ENSG00000174145|chr4:37444124-37444124|G/-|frameshift_variant;NWD2|p.K1317Nfs*43|1|0.35|ENSG00000174145|chr4:37445936-37445936|A/-|frameshift_variant;NWD2|p.W1259Gfs*22|4|0.26|ENSG00000174145|chr4:37445757-37445757|T/-|frameshift_variant	53.351449002276354	0.2690372970092375	2				NaN	NaN	0	NaN	7373	3539	10912
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10915	30.31	NaN	15665	30	0	2802.2	0.106	+			14680	GTIGDMMQK	9	77	490.7297807489522	979.4450085647044	2	490.73028564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTIGDMMQK_	ENSG00000107874|ENST00000369937|CUEDC2;ENST00000477994.1_1_10:104183924-104192326:-|nuORF	132.757866228626	0.013877640931359021	2				NaN	NaN	0	NaN	7374	3539	10912
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10916	30.312	NaN	9719.6	30	0	1843.3	0.106	+			48255	VTDGFSSLK	9	72	477.2504048384425	952.486256743685	2	477.2500305175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTDGFSSLK_	ENSG00000110245|ENST00000227667|APOC3	78.26377905018397	0.10505600812668463	2				NaN	NaN	0	NaN	7375	3539	10912
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10917	30.313	NaN	20366	30	0	2467.5	0.106	+			39684	STIGVDGSVYK	11	81	563.2927140967312	1124.5708752602623	2	563.293212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STIGVDGSVYK_	ENSG00000159399|ENST00000290573|HK2;ENST00000447818.2_1_X:79828255-79829731:-|nuORF	162.63603312974413	4.7853989453775665E-05	2				NaN	NaN	0	NaN	7376	3539	10912
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10918	30.315	NaN	9153.8	30	0	2240.7	0.038	+			27005	LYQRAFQHL	9	66	392.54858076443566	1174.623912893507	3	392.5486755371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LYQRAFQHL_	ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC;PRKDC|p.K3681Nfs*6|1|0.32|ENSG00000253729|chr8:47785174-47785177|TTCT/-|frameshift_variant;PRKDC|p.M3670*|1|0.5|ENSG00000253729|chr8:47785212-47785212|T/-|frameshift_variant;PRKDC|p.M3846Cfs*12|1|0.13|ENSG00000253729|chr8:47779047-47779047|T/-|frameshift_variant;PRKDC|p.M4020Cfs*2|1|0.31|ENSG00000253729|chr8:47776968-47776968|T/-|frameshift_variant;PRKDC|p.N3605Kfs*3|1|0.22|ENSG00000253729|chr8:47788993-47788994|-/T|frameshift_variant;PRKDC|p.N4037Ifs*15|1|0.17|ENSG00000253729|chr8:47776916-47776916|T/-|frameshift_variant;PRKDC|p.S3402Ifs*16|1|0.04|ENSG00000253729|chr8:47799302-47799303|-/AAACCGTGAGTTAGAGGAGGTAA|frameshift_variant;PRKDC|p.S4099Qfs*6|1|0.25|ENSG00000253729|chr8:47774265-47774265|A/-|frameshift_variant;PRKDC|p.W3401Cfs*4|1|0.01|ENSG00000253729|chr8:47799304-47799305|-/AATGAATA|frameshift_variant	40.77816245573522	0.41113185337114944	2				NaN	NaN	0	NaN	7377	3539	10912
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10919	30.316	NaN	4148.4	30	0	398.66	0.138			+	10314	ETRIGAEL	8	74	444.74252225047337	887.4704915677468	2	444.7428283691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ETRIGAEL_	REV__ENSG00000160703|ENST00000409109|NLRX1;REV__ENST00000481860.6_1_11:119043673-119051967:+|nuORF;REV__nc|ENSG00000160703|Q86UT6-2|NLRX1;REV__NLRX1|p.G888Vfs*13|1|0.4|ENSG00000160703|chr11:119183169-119183169|G/-|frameshift_variant;REV__NLRX1|p.L630Ffs*10|1|0.49|ENSG00000160703|chr11:119179902-119179902|G/-|frameshift_variant	54.776311868738084	0.5534952410049249	2				NaN	NaN	0	NaN	7378	3539	10912
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10933	30.347	NaN	18000	30	0	2372.1	0.214	+			6001	AVMDGNVITAK	11	78	559.797192014557	1117.579831095914	2	559.79833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVMDGNVITAK_	ENSG00000103316|ENST00000572914|CRYM;ENST00000571666.1_1_16:21273345-21289551:-|nuORF	94.53808932780436	0.0801970019496807	2				NaN	NaN	0	NaN	7389	3542	10932
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10934	30.351	NaN	6452.8	30	0	1569.4	0.106				-1	 	0	63	433.24205301379885	864.4695530943977	2	433.24267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7390	3542	10932
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10935	30.353	NaN	14502	30	0	1689.2	0.106	+			1027	AEKLGGSAVI	10	82	472.77423157446367	943.5339102157274	2	472.7742919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEKLGGSAVI_	ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65622809-65623088:-|nuORF	99.01295224348159	0.08062808246117298	2				NaN	NaN	0	NaN	7391	3542	10932
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10936	30.355	NaN	4992.5	30	0	1132.4	0.106				-1	 	0	63	439.2602131852731	876.5058734373462	2	439.26025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7392	3542	10932
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10937	30.357	NaN	2931.3	30	0	246.91	0.106				-1	LGMKIDLQR	9	69	545.3069583093144	NaN	0	545.3075561523438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_LGM(Oxidation (M))KIDLQR_	tr|U7SIU1|U7SIU1_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02231PE=4SV=1	45.97224482568171	0.23445038899310136	2				NaN	NaN	0	NaN	7393	3542	10932
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10938	30.358	NaN	6007.7	30	0	918.66	0.042			+	-1	EAAERLMQ	8	67	482.23327577326864	962.4519986133373	2	482.52001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_EAAERLM(Oxidation (M))Q_	REV__ENSG00000180900|ENST00000356994|SCRIB;REV__ENST00000525051.5_1_8:144874301-144875226:-|nuORF;REV__nc|ENSG00000180900|Q14160-2|SCRIB;REV__nc|ENSG00000180900|Q14160|SCRIB	40.77816245573522	0.6514838689002179	2				NaN	NaN	0	NaN	7394	3542	10932
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10939	30.359	NaN	2813.1	30	0	280.96	0.14	+			29934	PMAFAKPKL	9	79	501.7940803912658	1001.5736078493317	2	502.7923583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PMAFAKPKL_	ENSG00000147251|ENST00000276202|DOCK11;ENST00000553480.1_1_14:45332380-45332650:-|nuORF	30.503639358989545	0.5181749237905803	2				NaN	NaN	0	NaN	7395	3542	10932
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10952	30.388	NaN	7562.9	30	0	720.58	0.214	+			40904	SVFNKTLLK	9	82	525.3194406065218	1048.6243282798434	2	525.3214721679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVFNKTLLK_	ENSG00000121316|ENST00000240617|PLBD1	85.16082228582465	0.07850854922700509	2				NaN	NaN	0	NaN	7405	3545	10951
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10953	30.392	NaN	9674.4	30	0	2316.9	0.106	+			37057	SISAVVMEK	9	69	482.26168397844174	962.5088150236835	2	482.2624206542969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SISAVVMEK_	ENSG00000138688|ENST00000679879|BLTP1;KIAA1109-FSIP2|1|fusion;nc|ENSG00000138688|Q2LD37-2|BLTP1;nc|ENSG00000138688|Q2LD37-4|BLTP1;nc|ENSG00000138688|Q2LD37-6|BLTP1;nc|ENSG00000138688|Q2LD37-7|BLTP1;nc|ENSG00000138688|Q2LD37|BLTP1	114.8945686534367	0.024290463251177924	2				NaN	NaN	0	NaN	7406	3545	10951
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10954	30.394	NaN	3589.7	30	0	1241.1	0.106				-1	 	0	37	336.2272770584249	670.4400011836498	2	336.2274475097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7407	3545	10951
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10955	30.395	NaN	3759.1	30	0	590.86	0.106				-1	 	0	61	438.25241816610986	874.4902833990197	2	438.2525634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7408	3545	10951
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10956	30.397	NaN	8345	30	0	2807.4	0.106				-1	 	0	73	430.26548976506183	858.5164265969237	2	430.26593017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7409	3545	10951
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10957	30.399	NaN	2969.3	30	0	479.86	0.106	+			3791	ATAGFTIGR	9	68	447.24480596099795	892.4750589887959	2	447.24560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATAGFTIGR_	ENSG00000184634|ENST00000374080|MED12;MED12|p.E1337Kfs*8|1|0.26|ENSG00000184634|chrX:71130173-71130173|G/-|frameshift_variant;nc|ENSG00000184634|Q93074-2|MED12;nc|ENSG00000184634|Q93074-3|MED12	60.11826168202944	0.21262886028301267	2				NaN	NaN	0	NaN	7410	3545	10951
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10958	30.401	NaN	3422.6	30	0	559.58	0.036	+			25343	LPEAGTTRTF	10	70	546.7871493064611	1091.559745679722	2	546.7885131835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LPEAGTTRTF_	ENSG00000138162|ENST00000369005|TACC2;nc|ENSG00000138162|O95359-3|TACC2;TACC2|p.E1974Rfs*22|1|0.37|ENSG00000138162|chr10:122195118-122195119|-/C|frameshift_variant;TACC2|p.V2229Cfs*22|1|0.07|ENSG00000138162|chr10:122211108-122211109|-/A|frameshift_variant	75.65223720490533	0.23114180991572172	2				NaN	NaN	0	NaN	7411	3545	10951
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10969	30.426	NaN	24519	30	0	10055	0.214	+			32384	QVCDVVLNH	9	70	542.2654555582862	1082.5163581833724	2	542.2666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_QVC(Carbamidomethyl (C))DVVLNH_	ENSG00000050327|ENST00000056217|ARHGEF5;nc|ENSG00000050327|Q12774-2|ARHGEF5	180.86945649972546	0.001208757763874378	2				NaN	NaN	0	NaN	7419	3548	10968
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10970	30.43	NaN	11832	30	0	1464.1	0.106				-1	 	0	75	535.7622120236396	1069.509871114079	2	535.7636108398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7420	3548	10968
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10971	30.432	NaN	8002.7	30	0	672.15	0.106	+			36237	SEMKLSVNA	9	75	489.7492738218793	977.4839947105586	2	489.7497253417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEMKLSVNA_	ENSG00000241553|ENST00000397261|ARPC4;ENST00000440787.5_1_3:9845376-9847896:+|nuORF;ENST00000467289.5_1_3:9834805-9845712:+|nuORF;nc|ENSG00000241553|P59998-3|ARPC4;nc|ENSG00000241553|P59998-4|ARPC4	68.84614121027924	0.14577793175421136	2				NaN	NaN	0	NaN	7421	3548	10968
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10972	30.434	NaN	6188.5	30	0	1411.8	0.106			+	29877	PLHLYSLFE	9	79	559.797192014557	1117.579831095914	2	559.7989501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PLHLYSLFE_	REV__ENSG00000145911|ENST00000274605|N4BP3;REV__N4BP3|p.Y248Tfs*50|2|0.19|ENSG00000145911|chr5:178120583-178120583|C/-|frameshift_variant	47.657333605630114	0.33044192980041115	2				NaN	NaN	0	NaN	7422	3548	10968
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10973	30.435	NaN	9565.1	30	0	1172.6	0.106	+			8088	DVWEHLSL	8	69	499.752931069427	997.491309205654	2	499.7560119628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DVWEHLSL_	ENST00000379687.7_1_X:19935350-19935407:-|nuORF	74.51659920185547	0.36926395944126233	2				NaN	NaN	0	NaN	7423	3548	10968
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10974	30.437	NaN	3300.3	30	0	895.21	0.106				-1	 	0	52	420.2705222888542	838.5264916445084	2	420.2711181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7424	3548	10968
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10975	30.439	NaN	5457.2	30	0	1650.6	0.037			+	8601	ECIEKLKKL	9	47	368.55420369402054	1102.6407816822616	3	368.5543212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ECIEKLKKL_	REV__ENSG00000182621|ENST00000338037|PLCB1;REV__nc|ENSG00000182621|Q9NQ66-2|PLCB1	31.529811441608018	0.5085848003137583	2				NaN	NaN	0	NaN	7425	3548	10968
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10989	30.469	NaN	8941.6	30	0	1406.9	0.214	+			7247	DALRCVNNY	9	65	562.7603747830583	1123.5061966329165	2	562.7620239257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_DALRC(Carbamidomethyl (C))VNNY_	ENSG00000143155|ENST00000367833|TIPRL;nc|ENSG00000143155|O75663-2|TIPRL;TIPRL|p.F156Lfs*13|1|0.33|ENSG00000143155|chr1:168191448-168191448|T/-|frameshift_variant	101.25262130126117	0.03792372629710479	2				NaN	NaN	0	NaN	7436	3551	10988
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10990	30.472	NaN	5962.2	30	0	1520	0.106			+	-1	QMHQQAQLQ	9	54	376.5134230338711	1126.5184397018133	3	376.5135498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_QM(Oxidation (M))HQQAQLQ_	REV__ENSG00000182348|ENST00000333190|ZNF804B;REV__ZNF804B|p.P1231Tfs*23|1|0.28|ENSG00000182348|chr7:89336665-89336666|-/TCACC|frameshift_variant	26.69291269510374	0.5537881896960711	2				NaN	NaN	0	NaN	7437	3551	10988
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10991	30.474	NaN	4996.8	30	0	671.02	0.106			+	20269	KENKCGNGS	9	70	468.7136365192429	935.4127201052859	2	468.7142028808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KENKCGNGS_	REV__ENSG00000109929|ENST00000264027|SC5D	36.446750945000026	0.4619375763483977	2				NaN	NaN	0	NaN	7438	3551	10988
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10992	30.476	NaN	1726.8	30	0	403.68	0.106	+			16797	HPDEKSIITY	10	56	601.8060588924541	1201.597564851708	2	601.8060302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HPDEKSIITY_	ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1;SPTBN1|p.K503Rfs*24|1|0.06|ENSG00000115306|chr2:54626095-54626095|G/-|frameshift_variant	29.170058357718403	0.6416167986984785	2				NaN	NaN	0	NaN	7439	3551	10988
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10993	30.478	NaN	2419.5	30	0	272.87	0.106	+			8375	EALSQALKL	9	73	486.78927624176595	NaN	0	486.78924560546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EALSQALKL_	ENSG00000119720|ENST00000354366|NRDE2;ENST00000555903.1_1_14:90745249-90755225:-|nuORF	45.97224482568171	0.23445038899310136	2				NaN	NaN	0	NaN	7440	3551	10988
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10994	30.48	NaN	3906.6	30	0	588.06	0.036			+	31601	QLTYKLAKV	9	64	532.3280664971018	1062.6415800610034	2	532.8218383789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QLTYKLAKV_	REV__ENST00000261250.7_1_12:4598305-4598689:-|nuORF	39.252832667884924	0.4290233611298554	2				NaN	NaN	0	NaN	7441	3551	10988
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10995	30.48	NaN	7433.6	30	0	1104.2	0.14	+			20459	KEVIIHRL	8	74	504.3210464574161	1006.6275399816323	2	504.3215637207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KEVIIHRL_	ENSG00000162430|ENST00000361547|SELENON;nc|ENSG00000162430|Q9NZV5-2|SELENON	49.44154591367651	0.597725784090933	2				NaN	NaN	0	NaN	7442	3551	10988
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11007	30.508	NaN	18294	30	0	4990	0.214	+			23374	LAADCAHEL	9	84	471.7209481932623	941.4273434533246	2	471.72076416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LAADCAHEL_	ENSG00000157379|ENST00000288111|DHRS1;ENST00000558340.1_1_14:24760067-24761569:-|nuORF;ENST00000561137.5_1_14:24760413-24761527:-|nuORF;ENST00000561273.5_1_14:24760714-24761569:-|nuORF	111.64827973302667	0.027316110422332632	2				NaN	NaN	0	NaN	7451	3554	11006
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11008	30.511	NaN	10098	30	0	1817.8	0.106	+			40558	SVAECQLMK	9	71	504.7468707185263	1007.4791885038526	2	504.74639892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVAECQLMK_	ENSG00000105221|ENST00000392038|AKT2;ENST00000391844.8_1_19:40739781-40791100:-|nuORF;ENST00000537834.5_1_19:40745726-40771198:-|nuORF;nc|ENSG00000105221|P31751-2|AKT2	101.25262130126117	0.03792372629710479	2				NaN	NaN	0	NaN	7452	3554	11006
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11009	30.513	NaN	8176.8	30	0	1301.4	0.106			+	33392	RIATVWCT	8	67	475.250546573227	948.486540213254	2	475.251220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RIATVWCT_	REV__ENSG00000115290|ENST00000263915|GRB14;REV__GRB14|p.E402Rfs*18|1|0.29|ENSG00000115290|chr2:164497391-164497392|-/T|frameshift_variant;REV__nc|ENSG00000115290|Q14449-2|GRB14	60.97194046774394	0.49215940876911696	2				NaN	NaN	0	NaN	7453	3554	11006
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11010	30.515	NaN	6390	30	0	803.57	0.106	+			27548	MPEASGPKF	9	67	482.23327577326864	962.4519986133373	2	482.2335205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MPEASGPKF_	ENSG00000197077|ENST00000358431|KIAA1671;KIAA1671|p.S1569Afs*58|1|0.46|ENSG00000197077|chr22:25174289-25174289|C/-|frameshift_variant;KIAA1671|p.T1322Rfs*192|1|0.18|ENSG00000197077|chr22:25041088-25041088|A/-|frameshift_variant	82.7504851949679	0.08565546331141553	2				NaN	NaN	0	NaN	7454	3554	11006
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11011	30.517	NaN	3773.9	30	0	352.55	0.106	+			28220	NAVKLDDTY	9	70	519.7579442969545	1037.501335660709	2	519.7589111328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NAVKLDDTY_	DNAJC7|p.N369Mfs*6|3|0.26|ENSG00000168259|chr17:41982380-41982380|T/-|frameshift_variant;ENSG00000168259|ENST00000457167|DNAJC7;nc|ENSG00000168259|Q99615-2|DNAJC7	95.81516180277367	0.04847050768394289	2				NaN	NaN	0	NaN	7455	3554	11006
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11012	30.519	NaN	18620	30	0	12289	0.038			+	-1	VSCVRQGTSSL	11	56	398.53604915146116	1192.5863180545834	3	398.536376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_VSC(Carbamidomethyl (C))VRQGTSSL_	REV__ENSG00000160410|ENST00000291842|SHKBP1;REV__SHKBP1|p.S624Ifs*31|1|0.32|ENSG00000160410|chr19:40590830-40590831|-/A|frameshift_variant	21.0322348234405	0.7691802065814517	2				NaN	NaN	0	NaN	7456	3554	11006
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11013	30.519	NaN	8466.5	30	0	2113.2	0.138	+			40539	SVAALPVCK	9	70	444.25417005280025	886.4937871724005	2	444.2547607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVAALPVCK_	ENSG00000007255|ENST00000585934|TRAPPC6A;nc|ENSG00000007255|O75865-2|TRAPPC6A	56.72105179125745	0.24094814563026265	2				NaN	NaN	0	NaN	7457	3554	11006
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11025	30.547	NaN	60180	30	0	25382	0.214				-1	 	0	81	451.28899693205636	900.5634409309127	2	451.28924560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7466	3557	11024
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11026	30.55	NaN	9870.8	30	0	2335.7	0.106	+			30505	QAFGSGNNSY	10	68	522.7220903865065	1043.4296278398128	2	522.7228393554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QAFGSGNNSY_	ENSG00000120948|ENST00000240185|TARDBP;nc|ENSG00000120948|Q13148-4|TARDBP	115.23196543181992	0.034063879665207575	2				NaN	NaN	0	NaN	7467	3557	11024
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11027	30.552	NaN	46032	30	0	13030	0.106			+	42417	TAKRVADRRNG	11	79	415.237772736515	1242.6914888097451	3	415.2381896972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TAKRVADRRNG_	REV__ENST00000441257.1_1_10:31607356-31607903:-|nuORF;REV__ENST00000450834.2_1_10:31597037-31607903:-|nuORF;REV__ENST00000606250.1_1_10:31607570-31607903:-|nuORF;REV__ENST00000607455.1_1_10:31607508-31607900:-|nuORF	23.37791116691581	0.7445759747191538	2				NaN	NaN	0	NaN	7468	3557	11024
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11028	30.554	NaN	4186.2	30	0	453.51	0.106	+			42334	TAGKTTILY	9	58	484.27580488251255	966.5370568318251	2	484.2763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TAGKTTILY_	ENSG00000185829|ENST00000336125|ARL17A;ENSG00000228696|ENST00000450673|ARL17B;nc|ENSG00000228696|Q8IVW1-2|ARL17A;nc|ENSG00000228696|Q8IVW1-4|ARL17A	37.81151784470057	0.4459294069877048	2				NaN	NaN	0	NaN	7469	3557	11024
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11029	30.556	NaN	9799.2	30	0	2850.3	0.106	+			41037	SVIDRKDLIIK	11	70	433.9374210034258	1298.7904336104775	3	433.937744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVIDRKDLIIK_	ENSG00000170085|ENST00000429602|SIMC1;nc|ENSG00000170085|Q8NDZ2-3|SIMC1;nc|ENSG00000170085|Q8NDZ2-4|SIMC1;nc|ENSG00000170085|Q8NDZ2|SIMC1	34.08650109265054	0.6322515996262609	2				NaN	NaN	0	NaN	7470	3557	11024
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11030	30.558	NaN	6590.9	30	0	1055.4	0.034			+	35287	SALVPPRTL	9	78	477.2924651577497	952.5703773822994	2	477.2974548339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SALVPPRTL_	REV__ENST00000525963.5_1_11:22851094-22856569:+|nuORF	37.81151784470057	0.4459294069877048	2				NaN	NaN	0	NaN	7471	3557	11024
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11031	30.558	NaN	5509.7	30	0	657.51	0.14				-1	HVANTGMYI	9	72	511.2434271993883	1020.4723014655766	2	511.2442932128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_HVANTGM(Oxidation (M))YI_	nc|ENSG00000183977|A8MPX8-2|PP2D1	58.78195531508484	0.22376836668196862	2				NaN	NaN	0	NaN	7472	3557	11024
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11045	30.59	NaN	24260	30	0	2040	0.214				-1	 	0	94	507.2557735959155	1012.496994258631	2	507.2562255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7483	3560	11044
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11046	30.593	NaN	12465	30	0	2196	0.106	+			43200	TEVIHTGTL	9	76	485.76336845974265	969.5121839862853	2	485.7636413574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEVIHTGTL_	ENSG00000182986|ENST00000682928|ZNF320;ENSG00000189190|ENST00000692063|ZNF600;ENSG00000203326|ENST00000474037|ZNF525;ENSG00000204604|ENST00000595646|ZNF468;ENSG00000213020|ENST00000652185|ZNF611;ENSG00000213793|ENST00000638862|ZNF888;ENSG00000213799|ENST00000458035|ZNF845;nc|ENSG00000189190|Q6ZNG1|ZNF600;nc|ENSG00000204604|Q5VIY5-2|ZNF468;nc|ENSG00000213020|Q8N823-2|ZNF611;nc|ENSG00000293246|Q8N8H1|ZNF321P;ZNF468|p.K232Nfs*4|1|0.3|ENSG00000204604|chr19:52841598-52841598|T/-|frameshift_variant;ZNF525|p.S149Yfs*51|1|0.05|ENSG00000203326|chr19:53381024-53381025|-/ATTGC|frameshift_variant;ZNF611|p.F463Lfs*36|1|0.09|ENSG00000213020|chr19:52705666-52705666|A/-|frameshift_variant;ZNF611|p.K221Nfs*6|1|0.35|ENSG00000213020|chr19:52706392-52706392|T/-|frameshift_variant	152.47061609516894	0.006293267927334181	2				NaN	NaN	0	NaN	7484	3560	11044
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11047	30.595	NaN	9852.8	30	0	1378.2	0.106	+			40867	SVFGLKVSK	9	68	482.7943278992285	963.574102865257	2	482.794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVFGLKVSK_	ENSG00000188266|ENST00000388988|HYKK;nc|ENSG00000188266|A2RU49-2|HYKK;nc|ENSG00000188266|A2RU49-3|HYKK	62.107414245175825	0.1960472003779324	2				NaN	NaN	0	NaN	7485	3560	11044
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11048	30.597	NaN	3110.5	30	0	511.38	0.106			+	21520	KNQPPPVPL	9	63	495.2919283497277	988.5693037662554	2	495.2925109863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KNQPPPVPL_	REV__DZIP1|p.E777Kfs*6|2|0.22|ENSG00000134874|chr13:95586027-95586027|T/-|frameshift_variant;REV__DZIP1|p.K806Nfs*22|1|0.34|ENSG00000134874|chr13:95584842-95584842|T/-|frameshift_variant;REV__DZIP1|p.P700L|1|0.07|ENSG00000134874|chr13:95587658-95587658|G/A|missense_variant;REV__ENSG00000134874|ENST00000376829|DZIP1;REV__ENST00000485031.5_1_13:96234490-96239991:-|nuORF;REV__nc|ENSG00000134874|Q86YF9-2|DZIP1	37.15910966729921	0.4535818937225704	2				NaN	NaN	0	NaN	7486	3560	11044
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11049	30.599	NaN	4280.3	30	0	790.27	0.106			+	-1	CQNLMKQKI	9	61	393.53969826059455	NaN	0	393.53973388671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C),Oxidation (M)	_C(Carbamidomethyl (C))QNLM(Oxidation (M))KQKI_	REV__BDP1|p.N597Ifs*16|1|0.21|ENSG00000145734|chr5:71495394-71495394|A/-|frameshift_variant	45.97224482568171	0.23445038899310136	2				NaN	NaN	0	NaN	7487	3560	11044
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11050	30.601	NaN	4472.5	30	0	767.27	0.035			+	-1	SCGRLDVLV	9	74	502.2660489270585	NaN	0	502.2662048339844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SCGRLDVLV_	REV__ENST00000540643.5_2_22:31952952-31952985:+|nuORF	40.77816245573522	0.2702456086868081	2				NaN	NaN	0	NaN	7488	3560	11044
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11051	30.601	NaN	4506.6	30	0	308.25	0.14	+			17580	IEATKQYAL	9	70	518.7867087796187	1035.5588646260373	2	518.787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IEATKQYAL_	ENSG00000095585|ENST00000224337|BLNK;nc|ENSG00000095585|Q8WV28-2|BLNK	58.22992032128504	0.22837015374068087	2				NaN	NaN	0	NaN	7489	3560	11044
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11066	30.635	NaN	9488.8	30	0	2104.9	0.214	+			26705	LVIDSAVEK	9	75	487.28281737665844	972.5510818201169	2	487.2817077636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LVIDSAVEK_	ENSG00000131584|ENST00000354700|ACAP3;ENST00000472541.5_1_1:1235057-1244982:-|nuORF;nc|ENSG00000131584|Q96P50-1|ACAP3	62.107414245175825	0.1960472003779324	2				NaN	NaN	0	NaN	7501	3563	11065
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11067	30.638	NaN	10825	30	0	2977	0.106	+			30950	QENDRVVMV	9	71	545.2705624054641	1088.5265718777282	2	545.2720336914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QENDRVVMV_	ENSG00000119139|ENST00000377245|TJP2;ENST00000377259.5_2_9:71766567-71833305:+|nuORF;nc|ENSG00000119139|Q9UDY2-2|TJP2;nc|ENSG00000119139|Q9UDY2-3|TJP2;nc|ENSG00000119139|Q9UDY2-4|TJP2;nc|ENSG00000119139|Q9UDY2-5|TJP2;nc|ENSG00000119139|Q9UDY2-6|TJP2;nc|ENSG00000119139|Q9UDY2-7|TJP2;TJP2|p.F813Sfs*12|1|0.23|ENSG00000119139|chr9:69240013-69240013|T/-|frameshift_variant;TJP2|p.L79I|1|0.16|ENSG00000119139|chr9:69216459-69216459|C/A|missense_variant;TJP2|p.P484Qfs*30|1|0.18|ENSG00000119139|chr9:69228107-69228107|C/-|frameshift_variant;TJP2|p.R179Vfs*132|1|0.16|ENSG00000119139|chr9:69221074-69221074|G/-|frameshift_variant;TJP2|p.T849Rfs*12|1|0.32|ENSG00000119139|chr9:69240120-69240120|A/-|frameshift_variant	70.8162118820467	0.13725933411854815	2				NaN	NaN	0	NaN	7502	3563	11065
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11068	30.64	NaN	17263	30	0	3358.6	0.106			+	18857	IVETERIS	8	75	473.7635423607937	945.5125317883874	2	473.7636413574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IVETERIS_	REV__ENSG00000124145|ENST00000372733|SDC4;REV__nc|ENSG00000124145|P31431-2|SDC4	93.19546047674547	0.2677966331495483	2				NaN	NaN	0	NaN	7503	3563	11065
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11069	30.642	NaN	6112.3	30	0	1119.5	0.106	+			14516	GTDEPIFGK	9	77	482.2412181842019	962.4678834352038	2	482.2414245605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTDEPIFGK_	ENSG00000039123|ENST00000230640|MTREX;ENST00000503165.5_1_5:54603841-54625205:+|nuORF;ENST00000504388.5_1_5:54603829-54620403:+|nuORF	60.11826168202944	0.21262886028301267	2				NaN	NaN	0	NaN	7504	3563	11065
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11070	30.644	NaN	4829.2	30	0	439.22	0.106	+			36157	SEKVHVNLL	9	80	519.8001190442891	1037.585685155378	2	519.8006591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SEKVHVNLL_	ENSG00000080546|ENST00000436639|SESN1;ENSG00000130766|ENST00000253063|SESN2;ENSG00000149212|ENST00000536441|SESN3;nc|ENSG00000080546|Q9Y6P5-3|SESN1;nc|ENSG00000080546|Q9Y6P5|SESN1;nc|ENSG00000149212|P58005-4|SESN3	62.107414245175825	0.1960472003779324	2				NaN	NaN	0	NaN	7505	3563	11065
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11071	30.646	NaN	28979	30	0	6149.8	0.035	+			13503	GLNGLQLAVL	10	77	499.30521319740353	996.5958734616071	2	499.30560302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GLNGLQLAVL_	ENSG00000124535|ENST00000380773|WRNIP1;nc|ENSG00000124535|Q96S55-2|WRNIP1;nc|ENSG00000124535|Q96S55-3|WRNIP1;nc|ENSG00000124535|Q96S55-4|WRNIP1	35.15202426646627	0.5927656479315102	2				NaN	NaN	0	NaN	7506	3563	11065
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11072	30.646	NaN	5059.1	30	0	453.68	0.14			+	27198	MEDNKKNN	8	64	496.72623181040694	991.4379106876139	2	496.72686767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MEDNKKNN_	REV__ENSG00000189252|ENST00000370503|SPANXN3;REV__ENSG00000268988|ENST00000598475|SPANXN2	60.97194046774394	0.49215940876911696	2				NaN	NaN	0	NaN	7507	3563	11065
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11090	30.685	NaN	24486	30	0	3673.9	0.214	+			51219	YPTQPGQGY	9	77	505.7320104645635	1009.449467995927	2	505.732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YPTQPGQGY_	ENSG00000089280|ENST00000254108|FUS;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;FUS|p.P152Lfs*33|1|0.31|ENSG00000089280|chr16:31184324-31184324|C/-|frameshift_variant;nc|ENSG00000089280|P35637-2|FUS	77.31757898189308	0.1091473830098891	2				NaN	NaN	0	NaN	7522	3566	11089
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11091	30.689	NaN	16845	30	0	2817	0.106	+			5424	ATYILEAGK	9	70	483.2682446125413	964.5219362918826	2	483.2685852050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATYILEAGK_	ENSG00000148444|ENST00000376836|COMMD3;ENST00000463409.6_1_10:22605382-22615407:+|nuORF;ENST00000470045.1_1_10:22605346-22607030:+|nuORF;ENST00000472673.5_1_10:22606461-22607284:+|nuORF;ENST00000479958.6_1_10:22605346-22607121:+|nuORF;ENST00000483684.1_1_10:22606823-22607748:+|nuORF;ENST00000496071.5_1_10:22605382-22607284:+|nuORF;ENST00000602574.5_1_10:22605346-22607236:+|nuORF	122.93914200107957	0.019420478173996256	2				NaN	NaN	0	NaN	7523	3566	11089
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11092	30.691	NaN	7343.4	30	0	1851	0.106	+			49600	VYGKVDSF	8	68	457.7337383285722	913.4529237239444	2	457.73431396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYGKVDSF_	ENSG00000152127|ENST00000281923|MGAT5	66.42927471994793	0.4381325844043345	2				NaN	NaN	0	NaN	7524	3566	11089
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11093	30.693	NaN	14575	30	0	2410	0.106	+			18678	ITAKVATHL	9	82	477.2924651577497	952.5703773822994	2	477.2926025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ITAKVATHL_	ENSG00000116147|ENST00000367674|TNR;nc|ENSG00000116147|Q92752-2|TNR	68.78682469695295	0.14603441672067394	2				NaN	NaN	0	NaN	7525	3566	11089
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11094	30.695	NaN	5096.4	30	0	350.16	0.106				-1	VMARSLSPP	9	73	487.25920045791844	972.5038479826369	2	488.2587585449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_VM(Oxidation (M))ARSLSPP_	ENSG00000103197|ENST00000219476|TSC2;nc|ENSG00000103197|P49815-2|TSC2;nc|ENSG00000103197|P49815-3|TSC2;nc|ENSG00000103197|P49815-4|TSC2;nc|ENSG00000103197|P49815-5|TSC2;nc|ENSG00000103197|P49815-6|TSC2;nc|ENSG00000103197|P49815-7|TSC2;TSC2|p.S1427Vfs*49|1|0.21|ENSG00000103197|chr16:2084499-2084499|A/-|frameshift_variant	38.80614096846853	0.43426287593479557	2				NaN	NaN	0	NaN	7526	3566	11089
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11095	30.696	NaN	10595	30	0	4119.5	0.037	+			4176	ATFLDPRYK	9	39	370.8695657192455	1109.5868677579365	3	370.8695373535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATFLDPRYK_	ENSG00000214717|ENST00000652001|ZBED1	31.954861631926434	0.5046124803899898	2				NaN	NaN	0	NaN	7527	3566	11089
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11096	30.697	NaN	11669	30	0	1335.9	0.14	+			36190	SELITKAVAA	10	95	501.7946223165712	1001.5746916999424	2	501.794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SELITKAVAA_	ENSG00000124575|ENST00000244534|H1-3;ENSG00000168298|ENST00000304218|H1-4;ENSG00000184357|ENST00000331442|H1-5;ENSG00000187837|ENST00000343677|H1-2	65.15724298150197	0.31893571707528906	2				NaN	NaN	0	NaN	7528	3566	11089
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11108	30.724	NaN	8930.3	30	0	1430.2	0.214	+			42864	TEGKVGYEL	9	73	498.25533534404326	994.4961177548865	2	498.2557373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEGKVGYEL_	ENSG00000105618|ENST00000321030|PRPF31;ENST00000466404.5_1_19:54621832-54631576:+|nuORF;nc|ENSG00000105618|Q8WWY3-2|PRPF31;nc|ENSG00000105618|Q8WWY3-3|PRPF31;nc|ENSG00000105618|Q8WWY3-4|PRPF31	63.42647028704847	0.1850514934184437	2				NaN	NaN	0	NaN	7537	3569	11107
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11109	30.728	NaN	13816	30	0	2915.9	0.106				-1	 	0	75	459.26813786770214	916.5217228022043	2	459.26861572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7538	3569	11107
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11110	30.73	NaN	9148.4	30	0	771.65	0.106	+			26220	LSSKEVAIP	9	69	472.2762943712378	NaN	0	472.2763366699219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSSKEVAIP_	ENST00000377110.7_2_9:73461461-73477999:-|nuORF	58.78195531508484	0.1545138866451181	2				NaN	NaN	0	NaN	7539	3569	11107
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11111	30.731	NaN	3948.7	30	0	972.21	0.106			+	21315	KLTEQLVEQ	9	66	544.3031359954066	1086.591719057613	2	544.303955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KLTEQLVEQ_	REV__ENSG00000240694|ENST00000522362|PNMA2;REV__PNMA2|p.G87Vfs*5|1|0.13|ENSG00000240694|chr8:26508496-26508496|C/-|frameshift_variant	61.691277971877994	0.19951612995419254	2				NaN	NaN	0	NaN	7540	3569	11107
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11112	30.733	NaN	5187.7	30	0	528.5	0.106	+			50441	YADPVNAHY	9	70	525.2363629745956	1048.4581730159912	2	525.2384643554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YADPVNAHY_	ENSG00000119314|ENST00000374257|PTBP3;nc|ENSG00000119314|O95758-1|PTBP3;nc|ENSG00000119314|O95758-2|PTBP3;nc|ENSG00000119314|O95758-4|PTBP3;nc|ENSG00000119314|O95758-5|PTBP3;nc|ENSG00000119314|O95758-7|PTBP3;nc|ENSG00000119314|O95758|PTBP3	49.44154591367651	0.3095138337212152	2				NaN	NaN	0	NaN	7541	3569	11107
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11113	30.735	NaN	5999.2	30	0	698.02	0.106				-1	 	0	66	414.2522693077549	826.4899856823098	2	414.2522888183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7542	3569	11107
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11114	30.737	NaN	6366.6	30	0	1095.9	0.033	+			5875	AVIVALSSK	9	65	444.2813386933768	886.5481244535537	2	444.2815246582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AVIVALSSK_	ENSG00000078140|ENST00000261427|UBE2K;nc|ENSG00000078140|P61086-2|UBE2K;nc|ENSG00000078140|P61086-3|UBE2K	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	7543	3569	11107
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11127	30.764	NaN	40416	30	0	5691.7	0.215			+	8395	EANLTDVQL	9	99	501.75817710818586	1001.5018012831717	2	501.75836181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EANLTDVQL_	REV__ENSG00000133026|ENST00000360416|MYH10;REV__nc|ENSG00000133026|P35580-2|MYH10;REV__nc|ENSG00000133026|P35580-3|MYH10;REV__nc|ENSG00000133026|P35580-5|MYH10;REV__nc|ENSG00000133026|P35580|MYH10	72.87924865735499	0.12833875048249987	2				NaN	NaN	0	NaN	7553	3572	11126
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11128	30.768	NaN	27123	30	0	12975	0.106	+			27114	MAPERVASL	9	75	487.25920045791844	972.5038479826369	2	487.2601623535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MAPERVASL_	ENSG00000158169|ENST00000289081|FANCC;FANCC|p.V449Cfs*22|1|0.07|ENSG00000158169|chr9:95107254-95107254|C/-|frameshift_variant	68.84614121027924	0.14577793175421136	2				NaN	NaN	0	NaN	7554	3572	11126
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11129	30.77	NaN	19379	30	0	3939.8	0.106	+			13986	GSCSDFQFK	9	81	538.2285517039473	1074.4425504746946	2	538.2296142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_GSC(Carbamidomethyl (C))SDFQFK_	ENSG00000124429|ENST00000262753|POF1B;nc|ENSG00000124429|Q8WVV4-1|POF1B	136.26810882979174	0.012230845423532208	2				NaN	NaN	0	NaN	7555	3572	11126
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11130	30.772	NaN	8664	30	0	985.79	0.106	+			16412	HERDAFDTL	9	77	552.2589276623548	1102.5033023915096	2	552.259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HERDAFDTL_	ENSG00000197702|ENST00000334956|PARVA	53.08895987439943	0.27122541748218487	2				NaN	NaN	0	NaN	7556	3572	11126
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11131	30.773	NaN	4697.4	30	0	961.15	0.106	+			19387	KAMEGIFMK	9	74	527.7740305504823	1053.5335081677645	2	527.775146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KAMEGIFMK_	ENSG00000132581|ENST00000247020|SDF2;ENST00000585749.5_1_17:26976009-26989084:-|nuORF	82.7504851949679	0.08565546331141553	2				NaN	NaN	0	NaN	7557	3572	11126
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11132	30.775	NaN	2446.5	30	0	492.32	0.038	+			34876	RYTTEFHEL	9	53	598.2904669562436	1194.566380979287	2	598.2907104492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RYTTEFHEL_	ENSG00000166483|ENST00000450114|WEE1;ENST00000524549.1_1_11:9597437-9598815:+|nuORF;nc|ENSG00000166483|P30291-2|WEE1	30.317721548370564	0.5199124245378496	2				NaN	NaN	0	NaN	7558	3572	11126
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11133	30.776	NaN	1637.8	30	0	225.3	0.141	+			38239	SQMEQFPVK	9	58	547.2703254290795	1092.526097924959	2	547.2713012695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SQMEQFPVK_	ENSG00000153827|ENST00000675903|TRIP12;ENST00000461189.1_1_2:230659893-230661399:-|nuORF;nc|ENSG00000153827|Q14669-2|TRIP12;nc|ENSG00000153827|Q14669-3|TRIP12;nc|ENSG00000153827|Q14669-4|TRIP12;nc|ENSG00000153827|Q14669|TRIP12;TRIP12|p.H1434Afs*2|1|0.16|ENSG00000153827|chr2:229791143-229791144|-/T|frameshift_variant;TRIP12|p.Y1552Lfs*6|1|0.12|ENSG00000153827|chr2:229787620-229787621|-/A|frameshift_variant	36.446750945000026	0.4619375763483977	2				NaN	NaN	0	NaN	7559	3572	11126
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11151	30.815	NaN	21770	30	0	5305.7	0.214	+			35068	SAFGQAFSK	9	77	471.7373626814227	941.4601724296455	2	471.7376403808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAFGQAFSK_	ENSG00000129696|ENST00000431156|TTI2	114.85826248499774	0.024312442104607014	2				NaN	NaN	0	NaN	7574	3575	11150
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11152	30.819	NaN	2682.8	30	0	206.45	0.106			+	27076	MAIDFKNAQ	9	57	519.2559481505776	1036.4973433679552	2	519.2569580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MAIDFKNAQ_	REV__tr|U7T011|U7T011_FUSNUCyclohexadienyldehydrataseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00848PE=3SV=1	52.936696900407355	0.27249468807391813	2				NaN	NaN	0	NaN	7575	3575	11150
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11153	30.821	NaN	4380.6	30	0	830.65	0.106	+			626	ADVKVHIL	8	63	447.7738308022248	NaN	0	447.77398681640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ADVKVHIL_	ENSG00000115946|ENST00000263657|PNO1	76.84663266511073	1.7418937515398478	2				NaN	NaN	0	NaN	7576	3575	11150
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11154	30.823	NaN	3762.5	30	0	476.48	0.106			+	6883	CLLQQMML	8	62	490.24178150715335	978.4690100811067	2	490.2420959472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_CLLQQMML_	REV__ENST00000488016.1_1_3:110831041-110831131:+|nuORF	44.53106598305862	0.628196326904373	2				NaN	NaN	0	NaN	7577	3575	11150
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11155	30.824	NaN	2258.8	30	0	201.8	0.106	+			48392	VTIEGTSAVYK	11	66	584.3159361882414	1166.6173194432827	2	584.3170776367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTIEGTSAVYK_	ENSG00000125686|ENST00000300651|MED1;MED1|p.G570Vfs*9|1|0.06|ENSG00000125686|chr17:39410512-39410512|C/-|frameshift_variant;MED1|p.G814Afs*8|1|0.1|ENSG00000125686|chr17:39409779-39409780|CC/-|frameshift_variant;MED1|p.Q744Sfs*36|1|0.7|ENSG00000125686|chr17:39409991-39409991|G/-|frameshift_variant;MED1|p.S1294Yfs*16|1|0.06|ENSG00000125686|chr17:39408340-39408341|-/T|frameshift_variant;MED1|p.S616Lfs*31|1|0.21|ENSG00000125686|chr17:39410376-39410376|C/-|frameshift_variant;nc|ENSG00000125686|Q15648-3|MED1	67.21430809963624	0.25905749411346113	2				NaN	NaN	0	NaN	7578	3575	11150
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11156	30.826	NaN	1573.6	30	0	205.3	0.036	+			28916	NQVGFIRGVQ	10	56	559.3083892023866	1116.602225471573	2	559.3090209960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NQVGFIRGVQ_	L1PA8_dup4178|chr8:94121319-94127043:-|4.057818296907117|0.2856926403965029|3.83|481.0|156|3|sense	34.172542307311794	0.6007644933930345	2				NaN	NaN	0	NaN	7579	3575	11150
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11157	30.827	NaN	2316.5	30	0	212.23	0.14			+	23830	LCVALTER	8	64	452.75093636652906	NaN	0	452.7528991699219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LCVALTER_	REV__ENST00000489412.1_1_6:145956297-145956603:-|nuORF	83.28718786952967	1.7418937515398478	2				NaN	NaN	0	NaN	7580	3575	11150
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11171	30.858	NaN	12613	30	0	1750.7	0.214	+			39914	STMAIIVNK	9	72	488.77775062973024	975.5409483262605	2	488.77813720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STMAIIVNK_	ENSG00000082898|ENST00000401558|XPO1;ENST00000428210.5_1_2:61705957-61719950:-|nuORF;ENST00000461407.5_1_2:61712881-61715780:-|nuORF;ENST00000492182.5_1_2:61710065-61713073:-|nuORF	131.03138772384656	0.014687601201650916	2				NaN	NaN	0	NaN	7591	3578	11170
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11172	30.862	NaN	8124.3	30	0	915.85	0.106	+			25509	LPSPVTAQKY	10	81	552.3077715789331	1102.600990224666	2	552.3086547851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LPSPVTAQKY_	ENSG00000167658|ENST00000309311|EEF2;ENST00000598182.5_1_19:3980752-3982305:-|nuORF	101.45984612302182	0.07336148045341315	2				NaN	NaN	0	NaN	7592	3578	11170
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11173	30.864	NaN	4299.6	30	0	1446.4	0.106	+			47055	VLGCQYLH	8	61	466.73751120936294	NaN	0	466.7373046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VLGCQYLH_	ENSG00000166851|ENST00000300093|PLK1;ENST00000562272.5_1_16:23691188-23701381:+|nuORF;PLK1|p.E359Kfs*96|1|0.36|ENSG00000166851|chr16:23687502-23687502|A/-|frameshift_variant;PLK1|p.Y481Ffs*7|1|0.25|ENSG00000166851|chr16:23689508-23689509|-/TT|frameshift_variant	37.028477286268924	1.7418937515398478	2				NaN	NaN	0	NaN	7593	3578	11170
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11174	30.866	NaN	3419.6	30	0	588.04	0.106			+	-1	MSGARGTAAG	10	64	468.7136365192429	935.4127201052859	2	468.7136535644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))M(Oxidation (M))SGARGTAAG_	REV__ENST00000605886.1_1_1:156612267-156612468:-|nuORF	25.57405402267927	0.6709832231498071	2				NaN	NaN	0	NaN	7594	3578	11170
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11175	30.867	NaN	2776	30	0	719.58	0.106			+	19372	KALNYLKGGP	10	39	354.20951926647786	1059.6067283996335	3	354.2099304199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KALNYLKGGP_	REV__ENSG00000175073|ENST00000310421|VCPIP1;REV__VCPIP1|p.K1108Nfs*37|1|0.15|ENSG00000175073|chr8:66634846-66634846|T/-|frameshift_variant	29.170058357718403	0.6416167986984785	2				NaN	NaN	0	NaN	7595	3578	11170
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11176	30.869	NaN	1953.1	30	0	536.27	0.037	+			16212	HEDDHNFEL	9	59	578.2382513243847	1154.4619497155693	2	578.2390747070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HEDDHNFEL_	ENSG00000119787|ENST00000378954|ATL2;nc|ENSG00000119787|Q8NHH9-2|ATL2;nc|ENSG00000119787|Q8NHH9-4|ATL2;nc|ENSG00000119787|Q8NHH9-5|ATL2	52.936696900407355	0.27249468807391813	2				NaN	NaN	0	NaN	7596	3578	11170
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11177	30.87	NaN	2439.9	30	0	314.78	0.141			+	27982	MVPQWICPP	9	65	535.7622120236396	1069.509871114079	2	535.7628784179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MVPQWICPP_	REV__ENST00000396751.6_1_11:6629379-6629657:+|nuORF	26.79610172149135	0.5528238334041078	2				NaN	NaN	0	NaN	7597	3578	11170
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11190	30.899	NaN	205820	30	0	111990	0.161	+			31336	QISEVVVVK	9	87	500.8054391362919	999.5963253393838	2	500.80560302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QISEVVVVK_	ENSG00000099622|ENST00000587896|CIRBP;nc|ENSG00000099622|Q14011-2|CIRBP;nc|ENSG00000099622|Q14011|CIRBP	120.8684288430529	0.02067403653475984	2				NaN	NaN	0	NaN	7607	3581	11189
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11191	30.902	NaN	34643	30	0	9001	0.106	+			6313	AVTDAIMSR	9	77	482.24936085467084	962.4841687761417	2	482.2497253417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVTDAIMSR_	ENSG00000162298|ENST00000377190|SYVN1;ENST00000449943.5_1_11:64897669-64899838:-|nuORF;nc|ENSG00000162298|Q86TM6-2|SYVN1;nc|ENSG00000162298|Q86TM6-3|SYVN1;SYVN1|p.N368Qfs*129|1|0.33|ENSG00000162298|chr11:65130663-65130664|-/G|frameshift_variant;SYVN1|p.N368Tfs*117|1|0.4|ENSG00000162298|chr11:65130664-65130664|G/-|frameshift_variant	106.68306549817024	0.032382560583716295	2				NaN	NaN	0	NaN	7608	3581	11189
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11192	30.904	NaN	15096	30	0	2215.4	0.106	+			11907	FVAEQKVEY	9	76	556.7843151399376	1111.554077346675	2	556.784912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FVAEQKVEY_	ENSG00000114867|ENST00000346169|EIF4G1;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;ENST00000460829.5_1_3:184046782-184052693:+|nuORF;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1	190.2614974402762	0.00026591377982909756	2				NaN	NaN	0	NaN	7609	3581	11189
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11193	30.905	NaN	11609	30	0	7380.5	0.106			+	48605	VTRGAPRGSS	10	63	494.2710636049058	986.5275742766116	2	494.2710876464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTRGAPRGSS_	REV__ENST00000397091.9_1_8:38325804-38325987:-|nuORF	32.81241826257853	0.6118718159329168	2				NaN	NaN	0	NaN	7610	3581	11189
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11194	30.907	NaN	22024	30	0	4405.5	0.106	+			3955	ATATLHVL	8	77	413.2451686996982	824.4757844661964	2	413.2449951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATATLHVL_	ENSG00000081818|ENST00000194152|PCDHB4;ENSG00000112852|ENST00000194155|PCDHB2;ENSG00000113205|ENST00000231130|PCDHB3;ENSG00000113209|ENST00000231134|PCDHB5;ENSG00000113211|ENST00000231136|PCDHB6;ENSG00000113212|ENST00000231137|PCDHB7;ENSG00000120322|ENST00000239444|PCDHB8;ENSG00000120327|ENST00000239449|PCDHB14;ENSG00000120328|ENST00000239450|PCDHB12;ENSG00000177839|ENST00000316105|PCDHB9;ENSG00000187372|ENST00000341948|PCDHB13;ENSG00000272674|ENST00000609684|PCDHB16;nc|ENSG00000120327|Q9Y5E9-2|PCDHB14;nc|ENSG00000120328|Q9Y5F1-2|PCDHB12;nc|ENSG00000290894|Q96TA0|PCDHB18P;PCDHB8|p.G781Wfs*9|1|0.43|ENSG00000120322|chr5:141180370-141180371|-/T|frameshift_variant	138.4795579985376	0.25247962467161583	2				NaN	NaN	0	NaN	7611	3581	11189
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11195	30.909	NaN	5951.4	30	0	911.2	0.106	+			17215	HVHLNLEQF	9	58	379.53256718773787	1135.5758721634136	3	379.5330810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HVHLNLEQF_	tr|U7T304|U7T304_FUSNUTatDDNasefamilyproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00528PE=4SV=1	20.481830146152948	0.6112419832031293	2				NaN	NaN	0	NaN	7612	3581	11189
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11196	30.911	NaN	5306.1	30	0	1801.1	0.037	+			22361	KTGVVRCCVGQ	11	64	575.2975601196946	1148.580567306189	2	575.2977905273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KTGVVRCCVGQ_	ENSG00000134452|ENST00000362091|FBH1;nc|ENSG00000134452|Q8NFZ0-2|FBH1	20.030474535948922	0.7766990143561855	2				NaN	NaN	0	NaN	7613	3581	11189
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11209	30.938	NaN	77082	30	0	26300	0.214				-1	 	0	83	413.2627140970276	824.5108752608552	2	413.2633361816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7623	3584	11208
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11210	30.941	NaN	7033.4	30	0	1610.2	0.106	+			24267	LEVKTESL	8	67	459.7605855265629	NaN	0	459.7607116699219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LEVKTESL_	ENSG00000213676|ENST00000375203|ATF6B;ENST00000495579.5_1_6:32088425-32095984:-|nuORF;nc|ENSG00000213676|Q99941-2|ATF6B	90.36981228632155	1.7418937515398478	2				NaN	NaN	0	NaN	7624	3584	11208
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11211	30.943	NaN	18922	30	0	6880.8	0.106	+			30825	QEENITRAL	9	87	537.2820866055292	1072.5496202778584	2	537.2837524414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QEENITRAL_	ENSG00000099817|ENST00000615234|POLR2E;ENST00000586817.5_1_19:1089487-1094188:-|nuORF	140.11223852658463	0.010427410095706195	2				NaN	NaN	0	NaN	7625	3584	11208
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11212	30.945	NaN	3892.1	30	0	387.51	0.106			+	9778	ENPVVVVVK	9	67	491.80098971130826	NaN	0	491.8009033203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ENPVVVVVK_	REV__ENSG00000214753|ENST00000301785|HNRNPUL2	36.446750945000026	0.29355505452396785	2				NaN	NaN	0	NaN	7626	3584	11208
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11213	30.947	NaN	3097.7	30	0	351.31	0.106	+			40210	STSDKIFFH	9	78	541.2690937238063	1080.5236345144126	2	541.2703247070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STSDKIFFH_	ENSG00000163625|ENST00000295888|WDFY3;nc|ENSG00000163625|Q8IZQ1-2|WDFY3	50.033510581677724	0.3025703251535696	2				NaN	NaN	0	NaN	7627	3584	11208
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11214	30.949	NaN	3435.3	30	0	184.42	0.106	+			45023	TVFNVVTQ	8	67	454.2472755885141	906.4799982438283	2	454.247802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TVFNVVTQ_	ENST00000378535.4_1_12:88889468-88889528:-|nuORF	44.377184641726394	0.6291511924298419	2				NaN	NaN	0	NaN	7628	3584	11208
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11215	30.95	NaN	4087.5	30	0	722.27	0.037			+	-1	GDYILMVRK	9	45	370.8695657192455	1109.5868677579365	3	371.5414733886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_GDYILM(Oxidation (M))VRK_	REV__YOD1|p.L260M|1|0.41|ENSG00000180667|chr1:207049289-207049289|G/T|missense_variant	24.519189625965996	0.574102787014149	2				NaN	NaN	0	NaN	7629	3584	11208
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11227	30.976	NaN	64695	30	0	16545	0.214			+	26945	LYGKVQEL	8	78	475.27050303432634	948.5264531354527	2	475.2709045410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LYGKVQEL_	REV__ENSG00000163817|ENST00000358525|SLC6A20;REV__nc|ENSG00000163817|Q9NP91-2|SLC6A20	134.81075121484326	0.23895231276701365	2				NaN	NaN	0	NaN	7638	3587	11226
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11228	30.979	NaN	12606	30	0	1662.2	0.106			+	11377	FLLHQMLM	8	72	524.7700011447823	1047.5254493563646	2	524.77099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_FLLHQM(Oxidation (M))LM_	REV__URB1|p.S1483L|1|0.45|ENSG00000142207|chr21:32338769-32338769|G/A|missense_variant	65.89745868150666	0.44339748671293633	2				NaN	NaN	0	NaN	7639	3587	11226
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11229	30.981	NaN	8619	30	0	1137.4	0.106				-1	 	0	71	425.73654005144283	849.4585271696857	2	425.73675537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7640	3587	11226
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11230	30.983	NaN	5891	30	0	1035.1	0.106	+			4421	ATIEELTEK	9	72	517.2737160102815	1032.532879087363	2	517.2742309570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATIEELTEK_	ENSG00000159140|ENST00000356577|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-4|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-7|SON;nc|ENSG00000159140|P18583-9|SON	85.86182877749512	0.07653218437724067	2				NaN	NaN	0	NaN	7641	3587	11226
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11231	30.985	NaN	4868.3	30	0	650.03	0.106	+			1360	AEVELASRV	9	66	487.2680820386976	972.5216111441953	2	487.2676086425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEVELASRV_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	61.691277971877994	0.19951612995419254	2				NaN	NaN	0	NaN	7642	3587	11226
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11232	30.987	NaN	2458.9	30	0	357.87	0.037			+	33431	RIKASFSFND	10	72	592.8063825818049	1183.5982122304097	2	592.8067626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RIKASFSFND_	REV__ENSG00000123636|ENST00000392783|BAZ2B;REV__ENST00000472953.1_1_2:160261332-160289886:-|nuORF;REV__nc|ENSG00000226266|Q9UIF8-2|BAZ2B;REV__nc|ENSG00000226266|Q9UIF8-4|BAZ2B	27.64392233501311	0.6540798421315833	2				NaN	NaN	0	NaN	7643	3587	11226
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11233	30.987	NaN	2279.1	30	0	183.49	0.141			+	20191	KELAERVAV	9	68	507.80023584650894	1013.5859187598179	2	507.8008117675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KELAERVAV_	REV__ENSG00000130589|ENST00000467148|HELZ2;REV__HELZ2|p.G2213Vfs*22|1|0.14|ENSG00000130589|chr20:63561876-63561876|C/-|frameshift_variant;REV__HELZ2|p.R2206Vfs*29|2|0.28|ENSG00000130589|chr20:63561898-63561898|G/-|frameshift_variant;REV__nc|ENSG00000130589|Q9BYK8-2|HELZ2;REV__nc|ENSG00000130589|Q9BYK8|HELZ2	52.936696900407355	0.27249468807391813	2				NaN	NaN	0	NaN	7644	3587	11226
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11252	31.026	NaN	39222	30	0	8569.8	0.214	+			2680	AQNPSLFVK	9	96	502.2817777101729	1002.5490024871458	2	502.2819519042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AQNPSLFVK_	ENSG00000117410|ENST00000472174|ATP6V0B;nc|ENSG00000117410|Q99437-2|ATP6V0B	150.36159442982594	0.006784847064083231	2				NaN	NaN	0	NaN	7660	3590	11251
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11253	31.03	NaN	39273	30	0	14839	0.106	+			41204	SVLDSSALK	9	75	460.2579388360351	918.5013247388703	2	460.2582092285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVLDSSALK_	ENSG00000197077|ENST00000358431|KIAA1671;ENST00000494730.2_1_22:25573299-25581087:+|nuORF;nc|ENSG00000197077|Q9BY89-2|KIAA1671	138.06239232086	0.011389075116295402	2				NaN	NaN	0	NaN	7661	3590	11251
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11254	31.032	NaN	13727	30	0	4784.6	0.106				-1	 	0	73	446.2555189863892	890.4964850395784	2	446.2557373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7662	3590	11251
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11255	31.034	NaN	5020.5	30	0	1211.2	0.106	+			5579	AVATALGLK	9	57	422.26805467224864	842.5215564112973	2	422.26837158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVATALGLK_	ENSG00000107819|ENST00000393459|SFXN3	74.25504064058377	0.12238981753128622	2				NaN	NaN	0	NaN	7663	3590	11251
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11256	31.035	NaN	5231.1	30	0	2485.2	0.106	+			32345	QTYEEALYK	9	66	572.7791330403608	1143.5437131475214	2	572.7799682617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QTYEEALYK_	ENSG00000106541|ENST00000419304|AGR2	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	7664	3590	11251
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11257	31.037	NaN	8004.9	30	0	1189.4	0.106	+			35792	SEAGSRIVL	9	72	466.2636387099633	930.5127244867266	2	466.26397705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SEAGSRIVL_	ENSG00000159322|ENST00000456471|ADPGK;ENST00000562621.1_1_15:73044684-73048205:-|nuORF;ENST00000567941.5_1_15:73044684-73075795:-|nuORF;ENST00000569534.5_1_15:73044684-73076051:-|nuORF;nc|ENSG00000159322|Q9BRR6-2|ADPGK;nc|ENSG00000159322|Q9BRR6-3|ADPGK;nc|ENSG00000159322|Q9BRR6-4|ADPGK	72.87924865735499	0.12833875048249987	2				NaN	NaN	0	NaN	7665	3590	11251
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11258	31.039	NaN	2964.5	30	0	338.28	0.036	+			29266	NYGDQVQHF	9	68	554.2459016502713	1106.4772503673425	2	554.2470092773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NYGDQVQHF_	ENSG00000154016|ENST00000284154|GRAP	67.49366992349736	0.1516260258713357	2				NaN	NaN	0	NaN	7666	3590	11251
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11269	31.062	NaN	15263	30	0	3960.9	0.214				-1	 	0	85	508.8157171916287	1015.6168814500575	2	508.8161315917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7674	3593	11268
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11270	31.066	NaN	12530	30	0	2923.4	0.106	+			35019	SACSFTFSK	9	77	517.7338578703799	1033.4531628075597	2	517.734619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SAC(Carbamidomethyl (C))SFTFSK_	ENSG00000131375|ENST00000253693|CAPN7;ENST00000443567.5_1_3:15282348-15292515:+|nuORF	72.2432373244024	0.13108886737667413	2				NaN	NaN	0	NaN	7675	3593	11268
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11271	31.068	NaN	21833	30	0	6553.5	0.106	+			5462	ATYYGAFIKK	10	63	387.88095927422376	1160.6210484228714	3	387.8816223144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATYYGAFIKK_	ENSG00000071054|ENST00000324219|MAP4K4;ENSG00000141503|ENST00000355280|MINK1;ENSG00000154310|ENST00000436636|TNIK;ENST00000572330.5_1_17:4736842-4793277:+|nuORF;MAP4K4|p.G1177Efs*5|1|0.19|ENSG00000071054|chr2:101888826-101888826|G/-|frameshift_variant;MAP4K4|p.N722Mfs*3|1|0.46|ENSG00000071054|chr2:101867251-101867251|A/-|frameshift_variant;MINK1|p.D1112Gfs*17|1|0.14|ENSG00000141503|chr17:4895797-4895798|-/G|frameshift_variant;MINK1|p.E1253Rfs*14|1|0.42|ENSG00000141503|chr17:4896565-4896565|G/-|frameshift_variant;MINK1|p.F1308Lfs*15|1|0.19|ENSG00000141503|chr17:4897207-4897207|T/-|frameshift_variant;MINK1|p.I705Sfs*101|1|0.26|ENSG00000141503|chr17:4892425-4892425|A/-|frameshift_variant;nc|ENSG00000071054|O95819-2|MAP4K4;nc|ENSG00000071054|O95819-3|MAP4K4;nc|ENSG00000071054|O95819-4|MAP4K4;nc|ENSG00000071054|O95819-5|MAP4K4;nc|ENSG00000071054|O95819-6|MAP4K4;nc|ENSG00000071054|O95819|MAP4K4;nc|ENSG00000141503|Q8N4C8-2|MINK1;nc|ENSG00000141503|Q8N4C8-3|MINK1;nc|ENSG00000141503|Q8N4C8-4|MINK1;nc|ENSG00000141503|Q8N4C8-5|MINK1;nc|ENSG00000154310|Q9UKE5-2|TNIK;nc|ENSG00000154310|Q9UKE5-3|TNIK;nc|ENSG00000154310|Q9UKE5-4|TNIK;nc|ENSG00000154310|Q9UKE5-5|TNIK;nc|ENSG00000154310|Q9UKE5-6|TNIK;nc|ENSG00000154310|Q9UKE5-7|TNIK;nc|ENSG00000154310|Q9UKE5-8|TNIK;TNIK|p.E1253Kfs*13|1|0.04|ENSG00000154310|chr3:171066678-171066678|C/-|frameshift_variant;TNIK|p.F1336Lfs*15|1|0.15|ENSG00000154310|chr3:171063956-171063956|A/-|frameshift_variant;TNIK|p.K261Nfs*11|1|0.25|ENSG00000154310|chr3:171167261-171167261|T/-|frameshift_variant;TNIK|p.N93Efs*7|1|0.3|ENSG00000154310|chr3:171211146-171211147|-/T|frameshift_variant;TNIK|p.S560Ifs*2|1|0.05|ENSG00000154310|chr3:171128809-171128810|-/T|frameshift_variant;TNIK|p.V1263Cfs*3|1|0.42|ENSG00000154310|chr3:171066648-171066648|C/-|frameshift_variant	40.05817265558897	0.5486090488315611	2				NaN	NaN	0	NaN	7676	3593	11268
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11272	31.07	NaN	5948.5	30	0	915.21	0.106				-1	 	0	64	463.73969158529576	925.4648302373915	2	463.7402038574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7677	3593	11268
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11273	31.072	NaN	7377.4	30	0	1008.5	0.106	+			46003	VAVDVAVPK	9	69	449.27346249037714	896.5323720475543	2	449.27374267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VAVDVAVPK_	ENSG00000103253|ENST00000389703|HAGHL;ENST00000561750.1_1_16:777422-778482:+|nuORF;ENST00000567696.1_1_16:777422-777680:+|nuORF;ENST00000569143.1_1_16:777422-777998:+|nuORF;nc|ENSG00000103253|Q6PII5-3|HAGHL;nc|ENSG00000103253|Q6PII5-4|HAGHL;nc|ENSG00000103253|Q6PII5|HAGHL	95.81516180277367	0.04847050768394289	2				NaN	NaN	0	NaN	7678	3593	11268
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11274	31.073	NaN	5779.9	30	0	1414.7	0.106	+			27554	MPEKEPSVL	9	65	515.2675531106764	1028.5205532881528	2	515.2680053710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MPEKEPSVL_	ENSG00000155229|ENST00000438925|MMS19;ENST00000495415.5_1_10:99221527-99223714:-|nuORF;nc|ENSG00000155229|Q96T76-5|MMS19;nc|ENSG00000155229|Q96T76-8|MMS19;nc|ENSG00000155229|Q96T76-9|MMS19	82.7504851949679	0.08565546331141553	2				NaN	NaN	0	NaN	7679	3593	11268
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11275	31.075	NaN	1991.9	30	0	144.63	0.036			+	31974	QQWQATIKL	9	73	558.3133479915676	1114.6121430499352	2	558.31396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QQWQATIKL_	REV__ENST00000520864.5_1_5:170395310-170632776:+|nuORF	44.377184641726394	0.36891676396732553	2				NaN	NaN	0	NaN	7680	3593	11268
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11288	31.102	NaN	5402	30	0	934.93	0.214			+	26591	LTVKKVEH	8	62	477.2924651577497	952.5703773822994	2	477.2926025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LTVKKVEH_	REV__ENSG00000100813|ENST00000605057|ACIN1;REV__nc|ENSG00000100813|Q9UKV3-2|ACIN1;REV__nc|ENSG00000100813|Q9UKV3-3|ACIN1;REV__nc|ENSG00000100813|Q9UKV3-5|ACIN1;REV__nc|ENSG00000100813|Q9UKV3|ACIN1	38.80614096846853	0.6637206697844082	2				NaN	NaN	0	NaN	7690	3596	11287
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11289	31.106	NaN	5072.9	30	0	681.94	0.106			+	36466	SEVPQQQFV	9	69	531.2663073574138	1060.5180617816275	2	531.2674560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEVPQQQFV_	REV__nc|ENSG00000133101|P78396|CCNA1	34.172542307311794	0.4838870758800184	2				NaN	NaN	0	NaN	7691	3596	11287
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11290	31.108	NaN	3480.2	30	0	612.57	0.106	+			35117	SAGSVGFLK	9	51	433.2420614189698	864.4695699047396	2	433.2424621582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAGSVGFLK_	ENSG00000156011|ENST00000327040|PSD3;nc|ENSG00000156011|Q9NYI0|PSD3;PSD3|p.D956Rfs*11|1|0.17|ENSG00000156011|chr8:18556274-18556275|-/G|frameshift_variant;PSD3|p.D956Tfs*14|1|0.29|ENSG00000156011|chr8:18556275-18556275|G/-|frameshift_variant;PSD3|p.F625Lfs*6|1|0.25|ENSG00000156011|chr8:18804557-18804557|A/-|frameshift_variant;PSD3|p.L776Wfs*44|1|0.35|ENSG00000156011|chr8:18632699-18632699|A/-|frameshift_variant;PSD3|p.V655Efs*3|1|0.1|ENSG00000156011|chr8:18801329-18801330|-/CT|frameshift_variant	65.46538089061403	0.16805504838372562	2				NaN	NaN	0	NaN	7692	3596	11287
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11291	31.11	NaN	4039.3	30	0	997.26	0.106			+	30337	PTSQATLL	8	48	415.7353753638947	829.4561977945895	2	415.734619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PTSQATLL_	REV__ENSG00000101888|ENST00000372106|NXT2;REV__nc|ENSG00000101888|Q9NPJ8-3|NXT2;REV__nc|ENSG00000101888|Q9NPJ8-4|NXT2	55.50420428727701	0.5462892107279674	2				NaN	NaN	0	NaN	7693	3596	11287
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11292	31.111	NaN	5291.6	30	0	592.34	0.106	+			50946	YICGSHGVE	9	72	511.22320083056087	1020.4318487279218	2	511.2247009277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_YIC(Carbamidomethyl (C))GSHGVE_	ENSG00000172086|ENST00000347055|KRCC1	82.30502934623384	0.08758161712619916	2				NaN	NaN	0	NaN	7694	3596	11287
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11293	31.113	NaN	2132.5	30	0	308.36	0.106			+	43973	TPFAAYPFP	9	67	505.75261999701735	NaN	0	505.75286865234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TPFAAYPFP_	REV__ENSG00000126259|ENST00000360202|KIRREL2;REV__nc|ENSG00000126259|Q6UWL6-5|KIRREL2	26.79610172149135	0.34227917631780574	2				NaN	NaN	0	NaN	7695	3596	11287
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11294	31.115	NaN	3069.8	30	0	635.81	0.036			+	-1	TASLVMVSDK	10	60	533.7767958606261	NaN	0	533.7767333984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_TASLVM(Oxidation (M))VSDK_	REV__ENSG00000131791|ENST00000254101|PRKAB2;REV__nc|ENSG00000131791|O43741-2|PRKAB2	32.75053402867276	0.3926392905881664	2				NaN	NaN	0	NaN	7696	3596	11287
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11311	31.15	NaN	57035	30	0	6418.1	0.214	+			2493	APSKTSLIM	9	102	474.2648442012241	946.5151354692482	2	474.26470947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_APSKTSLIM_	ENSG00000114861|ENST00000649528|FOXP1;nc|ENSG00000285708|Q9H334-3|FOXP1;nc|ENSG00000285708|Q9H334-4|FOXP1;nc|ENSG00000285708|Q9H334-6|FOXP1;nc|ENSG00000285708|Q9H334-7|FOXP1;nc|ENSG00000285708|Q9H334-8|FOXP1	62.107414245175825	0.1960472003779324	2				NaN	NaN	0	NaN	7710	3599	11310
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11312	31.154	NaN	18516	30	0	2761.5	0.106			+	9733	EMYKILSQK	9	78	380.54278003954414	1138.6065107188324	3	380.5434265136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EMYKILSQK_	REV__ENSG00000106560|ENST00000223293|GIMAP2	51.19269402634007	0.2889735674168909	2				NaN	NaN	0	NaN	7711	3599	11310
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11313	31.156	NaN	4818.1	30	0	1186.9	0.106			+	36776	SIAMLLENY	9	68	527.2687152135527	1052.5228774939053	2	527.2721557617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SIAMLLENY_	REV__ENSG00000151348|ENST00000533608|EXT2;REV__ENST00000529186.1_1_11:44129577-44137613:+|nuORF;REV__EXT2|p.N517Tfs*3|1|0.49|ENSG00000151348|chr11:44206844-44206844|A/-|frameshift_variant;REV__nc|ENSG00000151348|Q93063-2|EXT2;REV__nc|ENSG00000151348|Q93063-3|EXT2	60.97194046774394	0.20551255781574032	2				NaN	NaN	0	NaN	7712	3599	11310
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11314	31.158	NaN	8618.2	30	0	3319.4	0.106			+	9628	ELQIEREK	8	77	522.7876204185575	1043.5606879039149	2	522.7881469726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ELQIEREK_	REV__CEP152|p.E1488Ifs*9|1|0.07|ENSG00000103995|chr15:48738920-48738921|-/TAATGAAAGACTTGGTTTAAAAGTAT|frameshift_variant;REV__CEP152|p.E966Ffs*23|1|0.03|ENSG00000103995|chr15:48756352-48756353|-/AGAAGGAGACAGAA|frameshift_variant;REV__CEP152|p.I1277Lfs*20|1|0.2|ENSG00000103995|chr15:48744246-48744246|T/-|frameshift_variant;REV__CEP152|p.L1674Tfs*23|1|0.09|ENSG00000103995|chr15:48738362-48738363|-/T|frameshift_variant;REV__CEP152|p.Q965Lfs*16|1|0.02|ENSG00000103995|chr15:48756354-48756355|-/ACAAACTTGTCTA|frameshift_variant;REV__ENSG00000103995|ENST00000380950|CEP152;REV__nc|ENSG00000103995|O94986-1|CEP152;REV__nc|ENSG00000103995|O94986-2|CEP152;REV__nc|ENSG00000103995|O94986-3|CEP152	101.25262130126117	0.2499877059228457	2				NaN	NaN	0	NaN	7713	3599	11310
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11315	31.159	NaN	5084.1	30	0	1347.6	0.106	+			17563	IEAEKIAQV	9	71	500.7868625700167	NaN	0	500.7867431640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IEAEKIAQV_	ENSG00000107566|ENST00000421367|ERLIN1	110.11987700582712	0.00958887139988123	2				NaN	NaN	0	NaN	7714	3599	11310
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11316	31.161	NaN	5217.4	30	0	711.4	0.037	+			21332	KLTYIYIQK	9	67	585.3499009146474	1168.6852488960947	2	585.3501586914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KLTYIYIQK_	ENST00000383746.7_2_3:44396236-44396287:+|nuORF	163.1509380574825	0.003936019289634439	2				NaN	NaN	0	NaN	7715	3599	11310
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11317	31.162	NaN	3474.1	30	0	202.81	0.141	+			12430	GEARVLAQM	9	63	487.7576751208853	973.5007973085707	2	487.7574157714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GEARVLAQM_	ENSG00000177728|ENST00000314256|TMEM94;ENST00000579241.1_1_17:73486365-73488110:+|nuORF;ENST00000581085.5_1_17:73467944-73489290:+|nuORF;ENST00000585105.5_1_17:73482215-73489290:+|nuORF;KIAA0195|p.H1145Ifs*95|1|0.14|ENSG00000177728|chr17:75497800-75497800|C/-|frameshift_variant;KIAA0195|p.S895Pfs*13|5|0.32|ENSG00000177728|chr17:75494982-75494982|C/-|frameshift_variant;nc|ENSG00000177728|Q12767-2|TMEM94;nc|ENSG00000177728|Q12767-3|TMEM94	60.11826168202944	0.21262886028301267	2				NaN	NaN	0	NaN	7716	3599	11310
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11330	31.191	NaN	45854	30	0	5765.6	0.214	+			3762	ATAELIMSR	9	89	496.2653007915877	990.5160486499755	2	496.2657775878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATAELIMSR_	ENSG00000105677|ENST00000222284|TMEM147;ENST00000477168.6_1_19:36036641-36037810:+|nuORF;ENST00000595467.1_1_19:36037522-36037810:+|nuORF;nc|ENSG00000105677|Q9BVK8-2|TMEM147	163.1509380574825	0.003936019289634439	2				NaN	NaN	0	NaN	7726	3602	11329
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11331	31.194	NaN	18533	30	0	2403.6	0.106			+	18966	IVRGQRHR	8	85	511.3098458604714	1020.6051387877428	2	511.3105163574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IVRGQRHR_	REV__ENSG00000205269|ENST00000379426|TMEM170B	40.5726180659479	0.6527593143185008	2				NaN	NaN	0	NaN	7727	3602	11329
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11332	31.196	NaN	19782	30	0	14776	0.106				-1	 	0	58	372.2014963672123	742.3884398012246	2	372.2017822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7728	3602	11329
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11333	31.198	NaN	3963.1	30	0	697.23	0.106	+			26701	LVIDNGSGMCK	11	69	568.7748346282419	1135.5351163232838	2	568.776123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LVIDNGSGMCK_	ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196604|ENST00000409914|POTEF;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000204434|Q9BYX7|POTEKP;POTEE|p.N792Kfs*34|1|0.2|ENSG00000188219|chr2:131263828-131263829|-/A|frameshift_variant;POTEF|p.R728Gfs*16|3|0.06|ENSG00000196604|chr2:130075290-130075290|G/-|frameshift_variant	78.26377905018397	0.16684720679201295	2				NaN	NaN	0	NaN	7729	3602	11329
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11334	31.2	NaN	4167.1	30	0	412.75	0.106				-1	MPSLRCLY	8	66	520.2564318686111	1038.4983108040221	2	520.2567749023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_MPSLRC(Carbamidomethyl (C))LY_	ENSG00000166167|ENST00000370187|BTRC;ENST00000475200.5_1_10:103113883-103221786:+|nuORF	55.50420428727701	0.5462892107279674	2				NaN	NaN	0	NaN	7730	3602	11329
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11335	31.202	NaN	6124.3	30	0	1094.2	0.036	+			16756	HLSLKSWAQ	9	77	535.2922294372726	1068.569905941345	2	535.2926635742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HLSLKSWAQ_	ENSG00000169247|ENST00000515425|SH3TC2;ENST00000504517.5_1_5:148386573-148411207:-|nuORF;ENST00000510779.1_1_5:148384276-148408226:-|nuORF;nc|ENSG00000169247|Q8TF17-4|SH3TC2;nc|ENSG00000169247|Q8TF17-5|SH3TC2	46.45678178249821	0.34452392205506005	2				NaN	NaN	0	NaN	7731	3602	11329
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11336	31.202	NaN	5530.2	30	0	506.97	0.139			+	-1	CSGVVVVAAV	10	68	480.7621308624078	959.5097087916156	2	480.7626037597656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_C(Carbamidomethyl (C))SGVVVVAAV_	REV__ENSG00000171174|ENST00000302188|RBKS;REV__nc|ENSG00000171174|Q9H477-2|RBKS	47.91560031466742	0.4762067885998563	2				NaN	NaN	0	NaN	7732	3602	11329
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11351	31.236	NaN	13097	30	0	2230.5	0.214	+			7212	DAISKTYSY	9	69	524.2529011060475	1046.4912492788949	2	524.2536010742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DAISKTYSY_	ENSG00000140988|ENST00000343262|RPS2;ENST00000397318.4_1_X:40794237-40794825:-|nuORF;ENST00000438210.1_1_1:40428398-40429073:+|nuORF;ENST00000441047.1_1_17:51834352-51834658:-|nuORF;ENST00000443417.1_1_9:102879039-102879699:-|nuORF;ENST00000475555.1_1_4:144270430-144270667:-|nuORF;ENST00000494359.1_1_11:17250107-17250695:+|nuORF;ENST00000529806.5_1_16:2012098-2012518:-|nuORF;ENST00000532746.5_2_16:2012101-2013785:-|nuORF;ENST00000533872.5_1_16:2012101-2013018:-|nuORF;RPL18-RPS2|1|fusion	176.44474024533739	0.0016668318535579616	2				NaN	NaN	0	NaN	7744	3605	11350
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11352	31.239	NaN	7441.1	30	0	931.43	0.106	+			11161	FGNKLLDAV	9	72	488.7765321087518	975.5385112843036	2	488.7767639160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FGNKLLDAV_	ENSG00000151287|ENST00000376032|TEX30;nc|ENSG00000151287|Q5JUR7-2|TEX30	44.116797842482775	0.37197099687881774	2				NaN	NaN	0	NaN	7745	3605	11350
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11353	31.241	NaN	5099.1	30	0	836.99	0.106			+	17194	HTTGKLEKP	9	77	505.78481301582804	1009.5550730984561	2	505.78509521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HTTGKLEKP_	REV__ENSG00000090104|ENST00000367459|RGS1;REV__ENST00000462589.1_1_1:192544922-192545496:+|nuORF;REV__ENST00000474373.1_1_1:192544922-192545979:+|nuORF;REV__ENST00000498352.1_1_1:192544922-192545979:+|nuORF;REV__ENST00000583155.1_1_1:192544922-192545060:+|nuORF;REV__nc|ENSG00000090104|Q08116-2|RGS1;REV__RGS1|p.R41Kfs*38|1|0.21|ENSG00000090104|chr1:192575907-192575908|-/A|frameshift_variant	35.15202426646627	0.4747332964206883	2				NaN	NaN	0	NaN	7746	3605	11350
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11354	31.243	NaN	5136.6	30	0	623.3	0.106	+			30341	PTTGQQNADE	10	75	530.7299729976313	1059.4453930620625	2	530.7315063476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PTTGQQNADE_	PLEKHG1|p.A73T|1|0.09|ENSG00000120278|chr6:150733898-150733898|G/A|missense_variant	32.75053402867276	0.6123771875927935	2				NaN	NaN	0	NaN	7747	3605	11350
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11355	31.245	NaN	3625.3	30	0	1373.9	0.106	+			11363	FLHCSSLSPAM	11	57	596.7779792623285	1191.5414055914569	2	596.7780151367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FLHCSSLSPAM_	ENST00000460307.1_1_2:70528513-70529143:-|nuORF	35.61828744233558	0.616184410043185	2				NaN	NaN	0	NaN	7748	3605	11350
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11356	31.247	NaN	4312.4	30	0	813.32	0.106	+			4347	ATGPPALLR	9	64	448.27152570598594	894.5284984787719	2	448.27154541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATGPPALLR_	ENSG00000054690|ENST00000329153|PLEKHH1;ENST00000558981.5_1_14:68038444-68042282:+|nuORF;nc|ENSG00000054690|Q9ULM0-2|PLEKHH1	54.776311868738084	0.25715957988447635	2				NaN	NaN	0	NaN	7749	3605	11350
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11357	31.248	NaN	3992.5	30	0	257.23	0.036			+	-1	VTAMAEVGFI	10	76	527.2687152135527	1052.5228774939053	2	527.767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_VTAM(Oxidation (M))AEVGFI_	REV__tr|U7T138|U7T138_FUSNUP-typeconjugativetransferproteinTrbLOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00885PE=4SV=1	34.172542307311794	0.6007644933930345	2				NaN	NaN	0	NaN	7750	3605	11350
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11368	31.274	NaN	145780	30	0	58026	0.214	+			37381	SLFSSKLST	9	80	485.26574431985364	968.5169357065073	2	485.2662658691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLFSSKLST_	ENSG00000058804|ENST00000371429|NDC1;nc|ENSG00000058804|Q9BTX1-2|NDC1;nc|ENSG00000058804|Q9BTX1-4|NDC1;nc|ENSG00000058804|Q9BTX1-5|NDC1;nc|ENSG00000058804|Q9BTX1-6|NDC1	87.75429964447693	0.0711966946989736	2				NaN	NaN	0	NaN	7758	3608	11367
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11369	31.277	NaN	10033	30	0	1025.3	0.106	+			741	AEDDFKKVL	9	83	532.783103778829	1063.5516546244578	2	532.7853393554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEDDFKKVL_	ENSG00000102580|ENST00000602402|DNAJC3	95.81516180277367	0.04847050768394289	2				NaN	NaN	0	NaN	7759	3608	11367
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11370	31.279	NaN	20347	30	0	5812.6	0.106				-1	 	0	73	376.9040553138084	1127.6903365416251	3	376.9045104980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7760	3608	11367
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11371	31.281	NaN	4713.9	30	0	611.09	0.106	+			20215	KELHPFDL	8	74	499.7687482659066	997.5229435986132	2	499.7691650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KELHPFDL_	ENSG00000054654|ENST00000555002|SYNE2;nc|ENSG00000054654|Q8WXH0|SYNE2;SYNE2|p.A5240Qfs*5|1|0.07|ENSG00000054654|chr14:64152639-64152639|G/-|frameshift_variant;SYNE2|p.D3074Ffs*8|1|0.07|ENSG00000054654|chr14:64053132-64053133|-/TTTCTTTTTCAAATACTTG|frameshift_variant;SYNE2|p.F2563Ifs*28|1|0.34|ENSG00000054654|chr14:64051593-64051594|-/A|frameshift_variant;SYNE2|p.F2840Lfs*3|1|0.38|ENSG00000054654|chr14:64052427-64052427|T/-|frameshift_variant;SYNE2|p.F4992Lfs*13|1|0.39|ENSG00000054654|chr14:64140067-64140067|T/-|frameshift_variant;SYNE2|p.L5308Ifs*18|1|0.12|ENSG00000054654|chr14:64158750-64158751|GG/-|frameshift_variant;SYNE2|p.M1669Wfs*6|1|0.36|ENSG00000054654|chr14:64017707-64017707|A/-|frameshift_variant;SYNE2|p.N1656Mfs*19|1|0.18|ENSG00000054654|chr14:64017669-64017669|A/-|frameshift_variant;SYNE2|p.S1830Kfs*9|1|0.34|ENSG00000054654|chr14:64021985-64021986|-/A|frameshift_variant;SYNE2|p.S6651Rfs*83|1|0.29|ENSG00000054654|chr14:64220596-64220597|-/G|frameshift_variant	35.61828744233558	0.6843154725607303	2				NaN	NaN	0	NaN	7761	3608	11367
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11372	31.283	NaN	4977.4	30	0	344.03	0.106				-1	 	0	75	463.73969158529576	925.4648302373915	2	463.739990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7762	3608	11367
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11373	31.285	NaN	3457.6	30	0	328.93	0.035	+			22677	KVADFGLVR	9	61	502.79806684032303	1003.5815807474461	2	502.7980651855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KVADFGLVR_	ENSG00000174292|ENST00000688331|TNK1;nc|ENSG00000174292|Q13470|TNK1	47.227680397652996	0.3354815899219835	2				NaN	NaN	0	NaN	7763	3608	11367
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11374	31.285	NaN	4446.6	30	0	413.29	0.138	+			12069	GAAGRPLEL	9	55	442.253017729179	882.4914825251581	2	442.25341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GAAGRPLEL_	ENSG00000120802|ENST00000556029|TMPO;nc|ENSG00000120802|P42167-2|TMPO;TMPO|p.L427Cfs*13|1|0.4|ENSG00000120802|chr12:98547767-98547767|T/-|frameshift_variant;TMPO|p.L427Ffs*18|1|0.28|ENSG00000120802|chr12:98547766-98547767|-/T|frameshift_variant;TMPO|p.R409Tfs*36|1|0.06|ENSG00000120802|chr12:98547707-98547708|-/A|frameshift_variant	62.107414245175825	0.1960472003779324	2				NaN	NaN	0	NaN	7764	3608	11367
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11386	31.312	NaN	16229	30	0	2159	0.214				-1	 	0	86	477.25574600701515	952.4969390808303	2	477.2560119628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7773	3611	11385
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11387	31.316	NaN	4707.4	30	0	781.99	0.106	+			4045	ATDELSSALAK	11	73	553.2906693377043	1104.5667857422086	2	553.2907104492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATDELSSALAK_	ENSG00000073614|ENST00000399788|KDM5A;nc|ENSG00000073614|P29375-2|KDM5A	120.27252224102466	0.019657071325519273	2				NaN	NaN	0	NaN	7774	3611	11385
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11388	31.318	NaN	4174.7	30	0	969.68	0.106	+			49464	VVYCIFSSR	9	67	537.2783403480325	1072.542127762865	2	537.2796630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVYCIFSSR_	ENST00000601419.5_1_19:48281997-48284145:+|nuORF	56.43379154798735	0.2433427591689151	2				NaN	NaN	0	NaN	7775	3611	11385
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11389	31.32	NaN	2283.8	30	0	390.96	0.106	+			19045	IYGSSHSW	8	58	468.7138464777199	NaN	0	468.7138671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IYGSSHSW_	DUOX1|p.S186N|1|0.29|ENSG00000137857|chr15:45135535-45135535|G/A|missense_variant;ENSG00000137857|ENST00000389037|DUOX1;ENSG00000140279|ENST00000389039|DUOX2;nc|ENSG00000140279|Q9NRD8|DUOX2	26.79610172149135	1.7418937515398478	2				NaN	NaN	0	NaN	7776	3611	11385
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11390	31.322	NaN	2466.3	30	0	232.44	0.106	+			10958	FDYSRSDY	8	69	526.7209641736815	1051.427375414163	2	526.7217407226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FDYSRSDY_	ENSG00000163510|ENST00000410053|CWC22	42.396135135203025	0.6414440140393314	2				NaN	NaN	0	NaN	7777	3611	11385
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11391	31.323	NaN	7824	30	0	1378.5	0.038	+			51090	YLRNLPITAH	10	68	399.89578460031373	1196.6655244011413	3	399.8957824707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YLRNLPITAH_	ENSG00000158486|ENST00000698260|DNAH3;nc|ENSG00000158486|Q8TD57|DNAH3	23.52269567125451	0.6877354443478558	2				NaN	NaN	0	NaN	7778	3611	11385
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11392	31.324	NaN	2137.7	30	0	152.61	0.138	+			13044	GEVVTVRV	8	59	429.75558937795455	857.4966258227091	2	429.7557067871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GEVVTVRV_	ENSG00000182827|ENST00000366812|ACBD3	44.377184641726394	0.6291511924298419	2				NaN	NaN	0	NaN	7779	3611	11385
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11405	31.353	NaN	4352.1	30	0	436.05	0.214	+			8538	EAVKLCDSY	9	64	542.7515902806222	1083.4886276280442	2	542.7534790039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_EAVKLC(Carbamidomethyl (C))DSY_	ENSG00000125944|ENST00000302271|HNRNPR;HNRNPR|p.L367Qfs*19|1|0.05|ENSG00000125944|chr1:23313620-23313621|-/TTTAATCTCT|frameshift_variant;HNRNPR|p.W594Gfs*15|1|0.23|ENSG00000125944|chr1:23310575-23310576|CA/-|frameshift_variant;nc|ENSG00000125944|O43390-2|HNRNPR;nc|ENSG00000125944|O43390-3|HNRNPR;nc|ENSG00000125944|O43390-4|HNRNPR	96.19043198914106	0.047412499214244314	2				NaN	NaN	0	NaN	7789	3614	11404
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11406	31.356	NaN	5099.5	30	0	1418.3	0.106			+	26200	LSSAAPATI	9	59	415.7353753638947	829.4561977945895	2	415.73980712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSSAAPATI_	REV__ENST00000357155.1_1_1:109837903-109840046:-|nuORF	90.77665401227738	0.06267569666681755	2				NaN	NaN	0	NaN	7790	3614	11404
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11407	31.358	NaN	8236	30	0	2054	0.106	+			33109	REMDEQIRL	9	71	595.3029581723838	1188.5913634115675	2	595.3037719726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_REMDEQIRL_	ENST00000413233.1_1_7:116612221-116612569:-|nuORF;ENST00000600996.1_1_19:42012510-42012810:+|nuORF;nc|ENSG00000143549|P06753-2|TPM3;nc|ENSG00000143549|P06753-3|TPM3;nc|ENSG00000143549|P06753-6|TPM3	83.6470233535746	0.08277643980271215	2				NaN	NaN	0	NaN	7791	3614	11404
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11408	31.36	NaN	10558	30	0	2689.2	0.106			+	-1	SIVARVFNMM	10	61	400.5346928092499	1198.5822490279497	3	400.53533935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Oxidation (M)	_SIVARVFNM(Oxidation (M))M(Oxidation (M))_	REV__ENSG00000140678|ENST00000268296|ITGAX;REV__ITGAX|p.R426Afs*20|3|0.11|ENSG00000140678|chr16:31362665-31362665|C/-|frameshift_variant;REV__ITGAX|p.T169M|1|0.59|ENSG00000140678|chr16:31359775-31359775|C/T|missense_variant	35.15202426646627	0.5927656479315102	2				NaN	NaN	0	NaN	7792	3614	11404
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11409	31.362	NaN	3941.2	30	0	673.12	0.106	+			532	ADALLQGLL	9	60	457.2708932152937	912.5272334973874	2	457.2707824707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ADALLQGLL_	SBK2|p.R305Q|1|0.17|ENSG00000187550|chr19:55529866-55529866|C/T|missense_variant	60.97194046774394	0.20551255781574032	2				NaN	NaN	0	NaN	7793	3614	11404
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11410	31.364	NaN	2453.3	30	0	614.29	0.033				-1	 	0	59	450.2341972193089	898.4538415054178	2	450.2343444824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7794	3614	11404
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11411	31.364	NaN	1782.4	30	0	427.29	0.139			+	23014	KVSLDFSQ	8	51	462.2448762306477	922.4751995280955	2	462.2451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KVSLDFSQ_	REV__APOB|p.K4541Sfs*8|1|0.34|ENSG00000084674|chr2:21001800-21001800|T/-|frameshift_variant;REV__APOB|p.S3866Yfs*21|1|0.06|ENSG00000084674|chr2:21005271-21005272|-/TAAGAAAT|frameshift_variant;REV__ENSG00000084674|ENST00000233242|APOB	40.77816245573522	0.6514838689002179	2				NaN	NaN	0	NaN	7795	3614	11404
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11425	31.395	NaN	4215.8	30	0	1203.6	0.214	+			44636	TTFTALTEK	9	71	506.27178218371876	1010.5290114342375	2	506.2712707519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTFTALTEK_	ENSG00000113578|ENST00000337706|FGF1;nc|ENSG00000113578|P05230-2|FGF1	65.46538089061403	0.16805504838372562	2				NaN	NaN	0	NaN	7806	3617	11424
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11426	31.399	NaN	5855.9	30	0	1517.7	0.106				-1	 	0	61	421.260238989783	840.505925046366	2	421.2605285644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7807	3617	11424
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11427	31.401	NaN	2940.4	30	0	360.58	0.106				-1	VSTSIKCL	8	56	454.24782785961094	906.4811027860219	2	454.2476806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_VSTSIKC(Carbamidomethyl (C))L_	ENST00000554102.5_1_14:88852162-88877015:+|nuORF	44.116797842482775	0.6307669463330267	2				NaN	NaN	0	NaN	7808	3617	11424
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11428	31.402	NaN	1769.9	30	0	334.96	0.106			+	-1	IPKMADCLGVH	11	50	600.2988220468419	1198.5830911604837	2	600.29931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_IPKM(Oxidation (M))ADCLGVH_	REV__ENSG00000152822|ENST00000282753|GRM1;REV__GRM1|p.P1015Lfs*16|1|0.39|ENSG00000152822|chr6:146434251-146434251|C/-|frameshift_variant;REV__nc|ENSG00000152822|Q13255-2|GRM1;REV__nc|ENSG00000152822|Q13255-3|GRM1	30.317721548370564	0.6717830234747728	2				NaN	NaN	0	NaN	7809	3617	11424
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11429	31.404	NaN	2789.6	30	0	370.69	0.106				-1	ESLEMTVPL	9	60	517.7587722169973	1033.5029915007945	2	517.7600708007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_ESLEM(Oxidation (M))TVPL_	COL2A1|p.P917Lfs*111|2|0.33|ENSG00000139219|chr12:47978742-47978742|G/-|frameshift_variant	31.954861631926434	0.5046124803899898	2				NaN	NaN	0	NaN	7810	3617	11424
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11430	31.406	NaN	1550.3	30	0	256.43	0.036			+	31193	QGPVQLTTGTV	11	65	550.8033294994332	1099.5921060656663	2	550.8041381835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QGPVQLTTGTV_	REV__ENSG00000103479|ENST00000262133|RBL2	42.86426827375447	0.5187511139693657	2				NaN	NaN	0	NaN	7811	3617	11424
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11431	31.407	NaN	2509.4	30	0	458.2	0.145	+			49658	VYISEHEHF	9	48	387.5168715139273	1159.5287851419819	3	387.5171813964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VYISEHEHF_	ENSG00000104853|ENST00000337392|CLPTM1;nc|ENSG00000104853|O96005-3|CLPTM1;nc|ENSG00000104853|O96005-4|CLPTM1	27.882242232435846	0.5426732730940306	2				NaN	NaN	0	NaN	7812	3617	11424
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11443	31.434	NaN	5044.4	30	0	801.69	0.214	+			29550	PEPQQTAL	8	56	442.2292180279657	882.4438831227314	2	442.2294616699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PEPQQTAL_	ENSG00000105928|ENST00000645220|GSDME;ENST00000469133.1_1_7:24747667-24749942:-|nuORF;nc|ENSG00000105928|O60443-3|GSDME	57.81127852772723	0.5234495074909924	2				NaN	NaN	0	NaN	7821	3620	11442
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11444	31.438	NaN	5010.7	30	0	636.08	0.106				-1	 	0	67	508.8157171916287	1015.6168814500575	2	508.816162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7822	3620	11442
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11445	31.44	NaN	5079.5	30	0	1068	0.106			+	-1	SIPCELTPL	9	66	515.2675531106764	1028.5205532881528	2	515.267822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SIPC(Carbamidomethyl (C))ELTPL_	REV__FAM47C|p.P200Rfs*625|3|0.21|ENSG00000198173|chrX:37009004-37009004|C/-|frameshift_variant	45.9519527083369	0.35044536499095585	2				NaN	NaN	0	NaN	7823	3620	11442
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11446	31.442	NaN	8922.5	30	0	4101.2	0.106	+			35907	SEFLKEEKL	9	64	374.87260651350164	1121.595990140705	3	374.8728332519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SEFLKEEKL_	ENSG00000090686|ENST00000308271|USP48;nc|ENSG00000090686|Q86UV5-2|USP48;nc|ENSG00000090686|Q86UV5-3|USP48;nc|ENSG00000090686|Q86UV5-4|USP48;nc|ENSG00000090686|Q86UV5-7|USP48;nc|ENSG00000090686|Q86UV5-8|USP48;USP48|p.G702Wfs*5|1|0.12|ENSG00000090686|chr1:21706574-21706575|-/A|frameshift_variant;USP48|p.L982Ffs*9|1|0.08|ENSG00000090686|chr1:21690037-21690038|-/GG|frameshift_variant	35.61828744233558	0.47037581924408073	2				NaN	NaN	0	NaN	7824	3620	11442
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11447	31.443	NaN	2976.3	30	0	467.37	0.106	+			42213	TAAGNTISM	9	53	433.2077533589721	NaN	0	433.2077331542969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TAAGNTISM_	ENSG00000130940|ENST00000377022|CASZ1	95.81516180277367	0.029873745472008544	2				NaN	NaN	0	NaN	7825	3620	11442
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11448	31.445	NaN	3848.8	30	0	649.32	0.037	+			40004	STMSAEWVSK	10	67	563.2649783989904	1124.5154038647806	2	563.2664184570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STMSAEWVSK_	DHX36|p.M705Nfs*20|1|0.33|ENSG00000174953|chr3:154284905-154284906|-/T|frameshift_variant;DHX36|p.R854Efs*4|3|0.36|ENSG00000174953|chr3:154280586-154280586|T/-|frameshift_variant;ENSG00000174953|ENST00000496811|DHX36;nc|ENSG00000174953|Q9H2U1-2|DHX36;nc|ENSG00000174953|Q9H2U1-3|DHX36	99.01295224348159	0.08062808246117298	2				NaN	NaN	0	NaN	7826	3620	11442
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11449	31.446	NaN	2705	30	0	366.01	0.14				-1	 	0	66	458.2659274771461	914.5173020210922	2	459.26861572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7827	3620	11442
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11461	31.473	NaN	36538	30	0	7409	0.214	+			47937	VSMDYAISK	9	89	507.2517095858233	1012.4888662384466	2	507.2523193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSMDYAISK_	ENSG00000196453|ENST00000247930|ZNF777;ZNF777|p.P504Rfs*5|1|0.44|ENSG00000196453|chr7:149432761-149432761|G/-|frameshift_variant	143.37361013837676	0.008897369944672323	2				NaN	NaN	0	NaN	7836	3623	11460
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11462	31.477	NaN	18023	30	0	1944.1	0.106				-1	 	0	84	462.77868657276105	923.5428202123221	2	462.7790222167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7837	3623	11460
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11463	31.479	NaN	14945	30	0	9477.4	0.106	+			7703	DLNEVKEL	8	70	480.2554663624311	958.4963797916622	2	480.25555419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DLNEVKEL_	ENSG00000138386|ENST00000337386|NAB1;nc|ENSG00000138386|Q13506-2|NAB1	69.6276240434122	0.4100012001731381	2				NaN	NaN	0	NaN	7838	3623	11460
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11464	31.48	NaN	17525	30	0	7535.8	0.106				-1	 	0	48	336.19091855100885	670.3672841688177	2	336.1910095214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7839	3623	11460
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11465	31.482	NaN	7034.8	30	0	1530.7	0.106	+			44963	TVCDLIQSK	9	71	532.2755202396631	1062.5364875461262	2	532.2772827148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_TVC(Carbamidomethyl (C))DLIQSK_	ENSG00000030582|ENST00000053867|GRN;ENST00000585348.1_1_17:42428425-42428671:+|nuORF;nc|ENSG00000030582|P28799-2|GRN	104.01359247289065	0.03510646158778409	2				NaN	NaN	0	NaN	7840	3623	11460
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11466	31.484	NaN	2935.3	30	0	639.7	0.106	+			28709	NNILKNAI	8	64	450.2681529229715	898.5217529127431	2	450.26861572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NNILKNAI_	tr|U7SK84|U7SK84_FUSNUTrksystempotassiumuptakeproteinTrkAOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02136PE=4SV=1	40.5726180659479	0.6527593143185008	2				NaN	NaN	0	NaN	7841	3623	11460
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11467	31.486	NaN	3455.9	30	0	730.7	0.035	+			6790	CFQAASSTM	9	59	501.70392766632966	1001.3933023994593	2	501.7042541503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_C(Carbamidomethyl (C))FQAASSTM_	ENSG00000112685|ENST00000230449|EXOC2	82.24051045832904	0.08786059719216216	2				NaN	NaN	0	NaN	7842	3623	11460
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11479	31.511	NaN	22236	30	0	2232.4	0.214	+			46374	VELAESRAL	9	84	494.2769581607831	986.5393633883663	2	494.27703857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VELAESRAL_	ENST00000340533.8_2_18:71959085-71959217:-|nuORF	83.6470233535746	0.08277643980271215	2				NaN	NaN	0	NaN	7851	3626	11478
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11480	31.515	NaN	10914	30	0	1179.8	0.106	+			46505	VEVEKESVL	9	79	516.2860152455014	1030.5574775578027	2	516.2847900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VEVEKESVL_	ENSG00000156017|ENST00000376834|CARNMT1	131.03138772384656	0.014687601201650916	2				NaN	NaN	0	NaN	7852	3626	11478
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11481	31.517	NaN	6119.2	30	0	1300.9	0.106	+			38537	SSDSGSGFWK	10	67	529.233154296875	NaN	0	529.233154296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSDSGSGFWK_	ENSG00000126709|ENST00000361157|IFI6;nc|ENSG00000126709|P09912-2|IFI6;nc|ENSG00000126709|P09912-3|IFI6	126.24258497203832	0.016191653327371408	2				NaN	NaN	0	NaN	7853	3626	11478
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11482	31.519	NaN	5033.8	30	0	679.65	0.106	+			22030	KSIDFPLTK	9	67	524.8050024635834	1047.5954519939667	2	524.805908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KSIDFPLTK_	ENSG00000084073|ENST00000372759|ZMPSTE24	70.39856735676683	0.13906523160059378	2				NaN	NaN	0	NaN	7854	3626	11478
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11483	31.52	NaN	2775.4	30	0	253.69	0.106			+	7203	DAILQSVAI	9	66	465.26831804277674	928.5220831523535	2	465.26849365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DAILQSVAI_	REV__ENSG00000147251|ENST00000276202|DOCK11	40.77816245573522	0.41113185337114944	2				NaN	NaN	0	NaN	7855	3626	11478
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11484	31.522	NaN	2555.7	30	0	467.11	0.106	+			48648	VTSQIVEL	8	68	444.7549977891115	887.495442645023	2	444.75537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTSQIVEL_	ENSG00000123338|ENST00000293373|NCKAP1L;nc|ENSG00000123338|P55160-2|NCKAP1L	60.97194046774394	0.49215940876911696	2				NaN	NaN	0	NaN	7856	3626	11478
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11485	31.524	NaN	1620.8	30	0	287.92	0.036	+			50928	YGRDRQAAR	9	65	546.7877470124225	1091.560941091645	2	546.7883911132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YGRDRQAAR_	ENST00000474291.1_1_7:97911865-97912000:+|nuORF	37.81151784470057	0.4459294069877048	2				NaN	NaN	0	NaN	7857	3626	11478
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11500	31.556	NaN	10885	30	0	3663.9	0.214	+			48934	VVEGSFVYK	9	67	514.276096044312	1026.537639155424	2	514.2767944335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVEGSFVYK_	ENSG00000203879|ENST00000447750|GDI1;ENST00000491154.1_1_X:153666748-153668487:+|nuORF;GDI1|p.G114D|1|0.12|ENSG00000203879|chrX:154439093-154439093|G/A|missense_variant	93.1432384553994	0.056003526918089595	2				NaN	NaN	0	NaN	7869	3629	11499
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11501	31.559	NaN	4066.3	30	0	533.02	0.106	+			35419	SARIEYDAY	9	68	544.2557860210493	1086.4970191088985	2	544.257080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SARIEYDAY_	ARFIP1|p.K303Nfs*13|1|0.22|ENSG00000164144|chr4:152888246-152888246|A/-|frameshift_variant;ARFIP1|p.R271C|1|0.38|ENSG00000164144|chr4:152888152-152888152|C/T|missense_variant;ENSG00000164144|ENST00000353617|ARFIP1;nc|ENSG00000164144|P53367-2|ARFIP1;nc|ENSG00000164144|P53367-3|ARFIP1	62.107414245175825	0.1960472003779324	2				NaN	NaN	0	NaN	7870	3629	11499
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11502	31.561	NaN	6176	30	0	901.46	0.106	+			7372	DDNKVLTL	8	67	459.2497125425836	916.4848721519672	2	459.25006103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DDNKVLTL_	DNAH11|p.A2559Sfs*4|1|0.42|ENSG00000105877|chr7:21738723-21738724|-/A|frameshift_variant;DNAH11|p.A4348Tfs*8|1|0.06|ENSG00000105877|chr7:21894990-21894991|-/CACTTTA|frameshift_variant;DNAH11|p.E3097Nfs*4|1|0.21|ENSG00000105877|chr7:21773946-21773946|A/-|frameshift_variant;DNAH11|p.L3180Sfs*6|1|0.05|ENSG00000105877|chr7:21784481-21784482|-/CAGA|frameshift_variant;DNAH11|p.N3090Kfs*2|1|0.09|ENSG00000105877|chr7:21773928-21773929|-/A|frameshift_variant;DNAH11|p.S2374Qfs*2|1|0.14|ENSG00000105877|chr7:21717910-21717911|-/C|frameshift_variant;DNAH11|p.T4414Nfs*34|1|0.37|ENSG00000105877|chr7:21900050-21900051|-/A|frameshift_variant;DNAH11|p.T4414Qfs*72|3|0.34|ENSG00000105877|chr7:21900051-21900051|A/-|frameshift_variant;DNAH17|p.D2341Tfs*111|1|0.32|ENSG00000187775|chr17:78486305-78486305|G/-|frameshift_variant;DNAH17|p.G2596Afs*13|1|0.33|ENSG00000187775|chr17:78479600-78479600|G/-|frameshift_variant;DNAH17|p.K3895Nfs*2|1|0.24|ENSG00000187775|chr17:78439210-78439210|T/-|frameshift_variant;DNAH17|p.N4131Tfs*34|2|0.38|ENSG00000187775|chr17:78429136-78429136|G/-|frameshift_variant;DNAH2|p.I2363Yfs*40|1|0.31|ENSG00000183914|chr17:7792278-7792278|C/-|frameshift_variant;DNAH2|p.K4326Rfs*84|3|0.27|ENSG00000183914|chr17:7832920-7832920|C/-|frameshift_variant;DNAH2|p.Q4263Sfs*13|1|0.12|ENSG00000183914|chr17:7832639-7832639|C/-|frameshift_variant;DNAH9|p.G3533Dfs*40|1|0.29|ENSG00000007174|chr17:11880190-11880190|A/-|frameshift_variant;DNAH9|p.I3688Tfs*40|1|0.11|ENSG00000007174|chr17:11886915-11886924|ATCATGAACG/-|frameshift_variant;DNAH9|p.P2650Hfs*2|2|0.29|ENSG00000007174|chr17:11784422-11784422|C/-|frameshift_variant;ENSG00000007174|ENST00000262442|DNAH9;ENSG00000105877|ENST00000409508|DNAH11;ENSG00000183914|ENST00000572933|DNAH2;ENSG00000187775|ENST00000389840|DNAH17;ENST00000586052.5_1_17:76475094-76487566:-|nuORF;nc|ENSG00000007174|Q9NYC9-2|DNAH9;nc|ENSG00000183914|Q9P225-2|DNAH2	62.107414245175825	0.4809183816468817	2				NaN	NaN	0	NaN	7871	3629	11499
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11503	31.563	NaN	3433.3	30	0	852.87	0.106			+	21641	KPTFKDLQ	8	66	488.7765321087518	975.5385112843036	2	489.2792663574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KPTFKDLQ_	REV__ENSG00000206113|ENST00000635017|CFAP99	47.657333605630114	0.6087971902037268	2				NaN	NaN	0	NaN	7872	3629	11499
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11504	31.565	NaN	7076	30	0	3314.9	0.106			+	10488	EVSDPPIA	8	59	414.21049168482887	826.4064304364578	2	414.2108459472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EVSDPPIA_	REV__AKAP12|p.E1404Rfs*18|1|0.17|ENSG00000131016|chr6:151352600-151352600|G/-|frameshift_variant;REV__AKAP12|p.N1461Mfs*26|1|0.52|ENSG00000131016|chr6:151352767-151352767|A/-|frameshift_variant;REV__ENSG00000131016|ENST00000402676|AKAP12;REV__nc|ENSG00000131016|Q02952-2|AKAP12;REV__nc|ENSG00000131016|Q02952-3|AKAP12	46.76643321282427	0.6143254112625767	2				NaN	NaN	0	NaN	7873	3629	11499
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11505	31.567	NaN	2773.1	30	0	858.4	0.106				-1	 	0	45	372.2014963672123	742.3884398012246	2	372.2018127441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7874	3629	11499
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11506	31.568	NaN	3191.4	30	0	356.74	0.034			+	10938	FDSTYVRG	8	62	472.7269824810812	943.4394120289625	2	472.7265930175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FDSTYVRG_	REV__ENSG00000087095|ENST00000407008|NLK	34.172542307311794	0.6954784234644539	2				NaN	NaN	0	NaN	7875	3629	11499
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11518	31.594	NaN	224580	30	0	153800	0.214	+			37064	SISDKFFQK	9	97	367.1972713671576	1098.5699847016729	3	367.197509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SISDKFFQK_	ENSG00000089472|ENST00000343002|HEPH;HEPH|p.R1086Qfs*4|1|0.29|ENSG00000089472|chrX:66266444-66266445|-/C|frameshift_variant;nc|ENSG00000089472|Q9BQS7-2|HEPH;nc|ENSG00000089472|Q9BQS7-3|HEPH;nc|ENSG00000089472|Q9BQS7-4|HEPH	60.11826168202944	0.21262886028301267	2				NaN	NaN	0	NaN	7884	3632	11517
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11519	31.598	NaN	27668	30	0	6699.5	0.106				-1	 	0	73	458.2659274771461	914.5173020210922	2	458.2662658691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7885	3632	11517
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11520	31.6	NaN	18937	30	0	10259	0.106	+			25213	LMMALVVL	8	64	461.2605713078294	920.5065896824589	2	461.2608642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Oxidation (M)	_LM(Oxidation (M))M(Oxidation (M))ALVVL_	ENSG00000228083|ENST00000380222|IFNA14	43.626045697637714	0.6338121648150432	2				NaN	NaN	0	NaN	7886	3632	11517
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11521	31.601	NaN	11351	30	0	2875.7	0.106			+	14435	GTATLYKLS	9	74	477.26840367679523	952.5222544203905	2	477.2685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTATLYKLS_	REV__ENST00000507036.1_1_5:7867877-7868021:-|nuORF	75.04331003522576	0.118981335847003	2				NaN	NaN	0	NaN	7887	3632	11517
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11522	31.603	NaN	7950	30	0	3050.2	0.106	+			40505	STYMDRVFK	9	53	382.85827335149094	1145.5529906546728	3	382.8584289550781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STYMDRVFK_	ENSG00000158201|ENST00000289119|ABHD3	34.172542307311794	0.4838870758800184	2				NaN	NaN	0	NaN	7888	3632	11517
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11523	31.605	NaN	6016	30	0	2727	0.036				-1	SNNLLMDAR	9	58	350.50744105037285	1048.5004937513186	3	350.5075378417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_SNNLLM(Oxidation (M))DAR_	tr|U7SWP6|U7SWP6_FUSNUMembraneproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01126PE=4SV=1	32.81241826257853	0.4965981579233955	2				NaN	NaN	0	NaN	7889	3632	11517
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11524	31.606	NaN	2750.3	30	0	184.62	0.139	+			36232	SEMAVAHAL	9	61	464.73050907344657	927.4464652136932	2	464.73065185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SEMAVAHAL_	ENSG00000163468|ENST00000295688|CCT3;nc|ENSG00000163468|P49368-2|CCT3	76.84663266511073	0.11118375776443899	2				NaN	NaN	0	NaN	7890	3632	11517
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11537	31.634	NaN	53612	30	0	7537.2	0.214	+			45475	TYDKGYQF	8	89	511.23470403999266	1020.4548551467853	2	511.2355651855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TYDKGYQF_	ENSG00000139197|ENST00000675855|PEX5;nc|ENSG00000139197|P50542-2|PEX5;nc|ENSG00000139197|P50542-3|PEX5;nc|ENSG00000139197|P50542-4|PEX5	93.19546047674547	0.2677966331495483	2				NaN	NaN	0	NaN	7900	3635	11536
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11538	31.638	NaN	15295	30	0	1592.5	0.106	+			35135	SAIAAVIAR	9	66	436.2709307412402	870.5273085492804	2	436.27191162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAIAAVIAR_	ENSG00000165949|ENST00000612813|IFI27;nc|ENSG00000165949|P40305-1|IFI27;nc|ENSG00000165949|P40305-3|IFI27;nc|ENSG00000165949|P40305-4|IFI27	110.11987700582712	0.028875675806141952	2				NaN	NaN	0	NaN	7901	3635	11536
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11539	31.639	NaN	4378.9	30	0	571.49	0.106	+			37066	SISDKFFQK	9	73	550.292138795169	1098.5697246571378	2	550.2930908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SISDKFFQK_	ENSG00000089472|ENST00000343002|HEPH;HEPH|p.R1086Qfs*4|1|0.29|ENSG00000089472|chrX:66266444-66266445|-/C|frameshift_variant;nc|ENSG00000089472|Q9BQS7-2|HEPH;nc|ENSG00000089472|Q9BQS7-3|HEPH;nc|ENSG00000089472|Q9BQS7-4|HEPH	129.42129120953632	0.01549634589885217	2				NaN	NaN	0	NaN	7902	3635	11536
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11540	31.641	NaN	7363.3	30	0	1187	0.106	+			3557	ASTLTYHVRR	10	73	602.332434740719	1202.650316548238	2	602.33203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASTLTYHVRR_	ENSG00000085274|ENST00000349841|MYNN;nc|ENSG00000085274|Q9NPC7-2|MYNN;nc|ENSG00000085274|Q9NPC7-3|MYNN	82.24051045832904	0.17731618517892733	2				NaN	NaN	0	NaN	7903	3635	11536
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11541	31.643	NaN	6868.9	30	0	902.4	0.106	+			29936	PMIARCLLA	9	71	494.2769581607831	986.5393633883663	2	494.77886962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PMIARCLLA_	ENST00000502464.5_1_5:65018131-65058826:+|nuORF;ENST00000506539.5_1_5:65018131-65088776:+|nuORF	52.29916861842294	0.2778091507991977	2				NaN	NaN	0	NaN	7904	3635	11536
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11542	31.645	NaN	4034.3	30	0	411.23	0.033	+			46021	VAVQVRAL	8	67	428.2736270961677	854.5327012591354	2	428.274169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VAVQVRAL_	ENST00000561142.5_1_14:24605441-24607359:+|nuORF	76.84663266511073	0.3498490246073164	2				NaN	NaN	0	NaN	7905	3635	11536
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11543	31.645	NaN	2726.8	30	0	199.61	0.142	+			50359	WVPEGAGPVLG	11	52	361.19360717288174	1080.5589921188453	3	361.19415283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_WVPEGAGPVLG_	ENSG00000198208|ENST00000557413|RPS6KL1;ENST00000553646.1_1_14:75375979-75376912:-|nuORF;ENST00000555834.5_1_14:75375979-75389943:-|nuORF;nc|ENSG00000198208|Q9Y6S9-2|RPS6KL1	31.634271133179894	0.6579734920221648	2				NaN	NaN	0	NaN	7906	3635	11536
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11558	31.679	NaN	9057.6	30	0	2064.5	0.214			+	42268	TAAVKELLAG	10	76	486.78939931255064	971.5642456919013	2	486.78955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAAVKELLAG_	REV__ENSG00000204479|ENST00000376098|PRAMEF17;REV__ENSG00000237700|ENST00000437300|PRAMEF33;REV__PRAMEF17|p.E417Gfs*22|1|0.04|ENSG00000204479|chr1:13392324-13392325|-/AG|frameshift_variant;REV__PRAMEF17|p.T389Afs*9|1|0.05|ENSG00000204479|chr1:13392241-13392242|-/GCTTGGGT|frameshift_variant	72.87924865735499	0.25379688738724415	2				NaN	NaN	0	NaN	7918	3638	11557
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11559	31.682	NaN	9813.9	30	0	2557.9	0.106	+			39104	SSSVVVLAGL	10	70	466.2764337013208	930.5383144694416	2	466.2764587402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSSVVVLAGL_	ENST00000585357.1_1_19:38782298-38782643:+|nuORF	82.30502934623384	0.17678907142465278	2				NaN	NaN	0	NaN	7919	3638	11557
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11560	31.684	NaN	4861.2	30	0	431.36	0.106	+			7769	DPDATSLKY	9	74	505.2452041491649	1008.4758553651299	2	505.24530029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DPDATSLKY_	ENSG00000131778|ENST00000369258|CHD1L;nc|ENSG00000131778|Q86WJ1-2|CHD1L;nc|ENSG00000131778|Q86WJ1-3|CHD1L;nc|ENSG00000131778|Q86WJ1-4|CHD1L;nc|ENSG00000131778|Q86WJ1-5|CHD1L	145.15565482312357	0.00806134135205793	2				NaN	NaN	0	NaN	7920	3638	11557
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11561	31.686	NaN	7246.5	30	0	2950.6	0.106	+			48707	VTTPPPLV	8	59	412.249542272402	822.484531611604	2	412.2496643066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTTPPPLV_	ENSG00000167491|ENST00000683918|GATAD2A;GATAD2A|p.P366Tfs*74|1|0.48|ENSG00000167491|chr19:19498606-19498607|-/C|frameshift_variant;GATAD2A|p.R273Gfs*42|1|0.27|ENSG00000167491|chr19:19496107-19496107|C/-|frameshift_variant;nc|ENSG00000167491|Q86YP4-2|GATAD2A;nc|ENSG00000167491|Q86YP4|GATAD2A	60.29395666154354	0.49887135096048313	2				NaN	NaN	0	NaN	7921	3638	11557
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11562	31.688	NaN	2460	30	0	1250.4	0.106				-1	 	0	37	350.2065545550837	698.3985561769674	2	350.2066345214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7922	3638	11557
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11563	31.69	NaN	3367.5	30	0	370.32	0.106	+			27595	MPMVTDNKM	9	67	533.740234375	NaN	0	533.740234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MPMVTDNKM_	ENSG00000175054|ENST00000350721|ATR;nc|ENSG00000175054|Q13535-2|ATR;nc|ENSG00000175054|Q13535-3|ATR	98.62937762414208	0.024200618960070384	2				NaN	NaN	0	NaN	7923	3638	11557
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11564	31.691	NaN	3390.8	30	0	439.52	0.035			+	9040	EGFAVSVGAAA	11	70	489.74829576726654	NaN	0	489.74786376953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EGFAVSVGAAA_	REV__CLCN4|p.A270E|1|0.39|ENSG00000073464|chrX:10206742-10206742|C/A|missense_variant	54.776311868738084	0.2810134756352116	2				NaN	NaN	0	NaN	7924	3638	11557
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11575	31.717	NaN	27042	30	0	3661.2	0.214				-1	 	0	85	450.2341972193089	898.4538415054178	2	450.23480224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7932	3641	11574
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11576	31.72	NaN	6056.3	30	0	1093.6	0.106	+			25539	LPVAKDVSY	9	67	496.2763443230967	990.5381357129934	2	496.27685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LPVAKDVSY_	ENSG00000169764|ENST00000337130|UGP2;ENST00000475550.5_1_2:64069329-64114799:+|nuORF;nc|ENSG00000169764|Q16851-2|UGP2;UGP2|p.N469Kfs*16|1|0.3|ENSG00000169764|chr2:63890166-63890167|-/A|frameshift_variant;UGP2|p.N469Mfs*4|1|0.39|ENSG00000169764|chr2:63890167-63890167|A/-|frameshift_variant	75.04331003522576	0.118981335847003	2				NaN	NaN	0	NaN	7933	3641	11574
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11577	31.722	NaN	4061.4	30	0	1164.3	0.106			+	17443	IAVNIVYCC	9	64	499.24576028286606	996.4769676325321	2	499.2463073730469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IAVNIVYCC_	REV__ENST00000481451.1_1_10:124172402-124177583:+|nuORF	28.2542754592877	0.5391964248700117	2				NaN	NaN	0	NaN	7934	3641	11574
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11578	31.724	NaN	2872.7	30	0	264.11	0.106	+			34802	RYLEKPMEI	9	62	589.8150338830266	1177.615514832853	2	589.8163452148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RYLEKPMEI_	ENSG00000168610|ENST00000264657|STAT3;nc|ENSG00000168610|P40763-2|STAT3;nc|ENSG00000168610|P40763-3|STAT3;STAT3|p.R729Afs*3|2|0.33|ENSG00000168610|chr17:42316861-42316861|G/-|frameshift_variant	63.53385203322761	0.18415635464017938	2				NaN	NaN	0	NaN	7935	3641	11574
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11579	31.726	NaN	4521.9	30	0	529.32	0.106	+			17964	IGTNVISIE	9	72	473.2658350429061	944.5171171526122	2	473.2663879394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IGTNVISIE_	ENSG00000196159|ENST00000394329|FAT4;FAT4|p.A2521Sfs*37|1|0.11|ENSG00000196159|chr4:125448571-125448572|-/G|frameshift_variant;FAT4|p.D3606Sfs*31|1|0.07|ENSG00000196159|chr4:125451831-125451832|-/AGTAAAGG|frameshift_variant;FAT4|p.E1642K|1|0.29|ENSG00000196159|chr4:125321335-125321335|G/A|missense_variant;FAT4|p.E3388Gfs*4|1|0.35|ENSG00000196159|chr4:125451179-125451179|A/-|frameshift_variant;FAT4|p.E4539Rfs*31|1|0.12|ENSG00000196159|chr4:125490431-125490431|C/-|frameshift_variant;FAT4|p.K4477Rfs*15|1|0.36|ENSG00000196159|chr4:125490247-125490247|G/-|frameshift_variant;FAT4|p.K4532Efs*21|1|0.37|ENSG00000196159|chr4:125490410-125490411|-/G|frameshift_variant;FAT4|p.K4532Rfs*38|1|0.19|ENSG00000196159|chr4:125490411-125490411|G/-|frameshift_variant;FAT4|p.L3734Ffs*22|1|0.27|ENSG00000196159|chr4:125452211-125452212|-/T|frameshift_variant;FAT4|p.L3734Yfs*8|2|0.3|ENSG00000196159|chr4:125452212-125452212|T/-|frameshift_variant;FAT4|p.Q4906Rfs*14|1|0.49|ENSG00000196159|chr4:125491536-125491536|C/-|frameshift_variant;FAT4|p.T3555Pfs*6|1|0.21|ENSG00000196159|chr4:125451679-125451679|A/-|frameshift_variant;nc|ENSG00000196159|Q6V0I7-3|FAT4;nc|ENSG00000196159|Q6V0I7|FAT4	53.351449002276354	0.2690372970092375	2				NaN	NaN	0	NaN	7936	3641	11574
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11580	31.728	NaN	952.04	30	0	101.83	0.037			+	21391	KMLQAFADKN	10	47	583.3032637748137	1164.5919746164273	2	583.3047485351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KMLQAFADKN_	REV__CFAP43|p.D1520Ifs*15|1|0.35|ENSG00000197748|chr10:104133658-104133658|C/-|frameshift_variant;REV__CFAP43|p.V1381Wfs*7|1|0.2|ENSG00000197748|chr10:104143444-104143444|T/-|frameshift_variant;REV__ENSG00000197748|ENST00000357060|CFAP43;REV__nc|ENSG00000197748|Q8NDM7-2|CFAP43	49.536043120802724	0.461275219792494	2				NaN	NaN	0	NaN	7937	3641	11574
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11581	31.728	NaN	4075.1	30	0	526.51	0.14	+			18721	ITGNMGLAMK	10	67	518.2693836494425	1034.5242143656849	2	518.2708129882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ITGNMGLAMK_	ENSG00000116171|ENST00000371514|SCP2;ENST00000488965.1_1_1:53516256-53516373:+|nuORF;nc|ENSG00000116171|P22307-2|SCP2;nc|ENSG00000116171|P22307-4|SCP2;nc|ENSG00000116171|P22307-6|SCP2;nc|ENSG00000116171|P22307-7|SCP2;nc|ENSG00000116171|P22307-8|SCP2	86.88156770896713	0.14892753630261096	2				NaN	NaN	0	NaN	7938	3641	11574
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11594	31.757	NaN	49363	30	0	11620	0.214				-1	 	0	85	450.2630033012271	898.5114536692543	2	450.2633056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7948	3644	11593
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11595	31.761	NaN	7605.5	30	0	1859.6	0.106	+			50037	WEEAAHDL	8	73	485.716435218427	969.4183175036541	2	485.7167053222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WEEAAHDL_	ENSG00000100380|ENST00000216218|ST13;nc|ENSG00000212789|Q8NFI4|ST13P5;nc|ENSG00000232150|Q8IZP2|ST13P4;ST13|p.G306Efs*50|1|0.18|ENSG00000100380|chr22:40827160-40827160|C/-|frameshift_variant	102.7733458925114	0.2491487235419157	2				NaN	NaN	0	NaN	7949	3644	11593
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11596	31.763	NaN	3099.2	30	0	655.93	0.106				-1	 	0	54	421.260238989783	840.505925046366	2	421.2607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7950	3644	11593
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11597	31.765	NaN	2804.4	30	0	376.97	0.106			+	39167	SSYAMDAFAL	10	58	538.2411944752962	1074.4678360173923	2	538.2421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSYAMDAFAL_	REV__ENSG00000183303|ENST00000329434|OR5P2;REV__OR5P2|p.I305Nfs*5|1|0.38|ENSG00000183303|chr11:7796029-7796030|-/T|frameshift_variant	34.172542307311794	0.6007644933930345	2				NaN	NaN	0	NaN	7951	3644	11593
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11598	31.767	NaN	2837.9	30	0	366.4	0.106	+			27560	MPEPDAQRF	9	71	545.7524220624664	1089.4902911917327	2	545.7537231445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MPEPDAQRF_	CHEK1|p.I234Nfs*11|1|0.24|ENSG00000149554|chr11:125635508-125635509|-/A|frameshift_variant;ENSG00000149554|ENST00000438015|CHEK1;nc|ENSG00000149554|O14757-2|CHEK1;nc|ENSG00000149554|O14757-3|CHEK1	52.936696900407355	0.27249468807391813	2				NaN	NaN	0	NaN	7952	3644	11593
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11599	31.768	NaN	1874.5	30	0	238.95	0.034	+			7288	DAQKAYIM	8	57	470.23355047116917	938.4525480091384	2	470.234130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DAQKAYIM_	ENSG00000128578|ENST00000249344|STRIP2;nc|ENSG00000128578|Q9ULQ0-2|STRIP2;STRIP2|p.Y154Ifs*25|1|0.03|ENSG00000128578|chr7:129453276-129453277|-/ATCT|frameshift_variant	53.351449002276354	0.5676011784961348	2				NaN	NaN	0	NaN	7953	3644	11593
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11600	31.769	NaN	3690.6	30	0	469.87	0.138	+			442	AAVGKSSFL	9	60	440.25009826917955	878.4856436051591	2	440.2503356933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AAVGKSSFL_	ENSG00000165105|ENST00000376447|RASEF	51.19269402634007	0.2889735674168909	2				NaN	NaN	0	NaN	7954	3644	11593
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11616	31.804	NaN	8288.6	30	0	1619.6	0.214			+	47634	VSAREWPL	8	66	479.26064640805447	956.506739882909	2	479.26104736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSAREWPL_	REV__ARHGAP20|p.A1161V|1|0.36|ENSG00000137727|chr11:110579464-110579464|G/A|missense_variant	64.20726635412375	0.4601301477144759	2				NaN	NaN	0	NaN	7967	3647	11615
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11617	31.808	NaN	31665	30	0	5270.9	0.106				-1	 	0	79	382.5603852684519	1144.6593264055557	3	382.560791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7968	3647	11615
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11618	31.81	NaN	4589.1	30	0	1499.6	0.106	+			32312	QTQSIYIPR	9	64	553.3031716701646	1104.591790407129	2	553.3043823242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QTQSIYIPR_	ENSG00000114573|ENST00000273398|ATP6V1A;nc|ENSG00000114573|P38606-2|ATP6V1A	56.632244143249146	0.24168844994051353	2				NaN	NaN	0	NaN	7969	3647	11615
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11619	31.811	NaN	5487.2	30	0	1790.5	0.106	+			5290	ATVILRKPEE	10	47	385.89553479503047	1154.6647749852914	3	385.8957824707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATVILRKPEE_	ENST00000398145.6_2_22:26877999-26878053:-|nuORF	26.063383197487333	0.6669871633831898	2				NaN	NaN	0	NaN	7970	3647	11615
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11620	31.813	NaN	2628.4	30	0	218.11	0.106	+			46163	VDVDQSSLIY	10	71	569.7843462185818	1137.5541395039636	2	569.785888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VDVDQSSLIY_	ENSG00000124900|ENST00000449290|TRIM51;nc|ENSG00000124900|Q9BSJ1-2|TRIM51	60.11826168202944	0.36476464221954025	2				NaN	NaN	0	NaN	7971	3647	11615
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11621	31.815	NaN	3020.2	30	0	316.83	0.034	+			50787	YENLGRAL	8	57	468.24999927451233	934.4854456158247	2	468.25054931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YENLGRAL_	ENSG00000054654|ENST00000555002|SYNE2;ENST00000557005.1_1_14:64469755-64489638:+|nuORF;nc|ENSG00000054654|Q8WXH0|SYNE2;SYNE2|p.A5240Qfs*5|1|0.07|ENSG00000054654|chr14:64152639-64152639|G/-|frameshift_variant;SYNE2|p.D3074Ffs*8|1|0.07|ENSG00000054654|chr14:64053132-64053133|-/TTTCTTTTTCAAATACTTG|frameshift_variant;SYNE2|p.F2563Ifs*28|1|0.34|ENSG00000054654|chr14:64051593-64051594|-/A|frameshift_variant;SYNE2|p.F2840Lfs*3|1|0.38|ENSG00000054654|chr14:64052427-64052427|T/-|frameshift_variant;SYNE2|p.F4992Lfs*13|1|0.39|ENSG00000054654|chr14:64140067-64140067|T/-|frameshift_variant;SYNE2|p.L5308Ifs*18|1|0.12|ENSG00000054654|chr14:64158750-64158751|GG/-|frameshift_variant;SYNE2|p.M1669Wfs*6|1|0.36|ENSG00000054654|chr14:64017707-64017707|A/-|frameshift_variant;SYNE2|p.N1656Mfs*19|1|0.18|ENSG00000054654|chr14:64017669-64017669|A/-|frameshift_variant;SYNE2|p.S1830Kfs*9|1|0.34|ENSG00000054654|chr14:64021985-64021986|-/A|frameshift_variant;SYNE2|p.S6651Rfs*83|1|0.29|ENSG00000054654|chr14:64220596-64220597|-/G|frameshift_variant	44.377184641726394	0.6291511924298419	2				NaN	NaN	0	NaN	7972	3647	11615
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11622	31.816	NaN	1285.2	30	0	386.84	0.143			+	39264	STAPQKLSQP	10	32	352.8622650532079	1055.5649657598237	3	352.86224365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STAPQKLSQP_	REV__ATF2|p.Q316K|1|0.04|ENSG00000115966|chr2:175097476-175097476|G/T|missense_variant	30.317721548370564	0.6322445173429027	2				NaN	NaN	0	NaN	7973	3647	11615
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11633	31.843	NaN	4544.8	30	0	525.17	0.214	+			1216	AEQKVEYTL	9	68	540.7816394821137	1079.5487260310274	2	540.7822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEQKVEYTL_	ENSG00000114867|ENST00000346169|EIF4G1;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;ENST00000460829.5_1_3:184046782-184052693:+|nuORF;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1	104.01359247289065	0.03510646158778409	2				NaN	NaN	0	NaN	7981	3650	11632
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11634	31.846	NaN	2948.2	30	0	335.35	0.106	+			20363	KESLKELSL	9	68	523.8084739626746	NaN	0	523.8084716796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KESLKELSL_	ENSG00000023191|ENST00000354420|RNH1;ENST00000525522.5_1_11:494693-499199:-|nuORF;ENST00000525701.5_1_11:494693-500690:-|nuORF	50.033510581677724	0.206462018841031	2				NaN	NaN	0	NaN	7982	3650	11632
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11635	31.848	NaN	4065.6	30	0	488.88	0.106			+	-1	FCCLVCTIAV	10	63	395.8539431049703	1184.539999915111	3	395.85455322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_FC(Carbamidomethyl (C))C(Carbamidomethyl (C))LVCTIAV_	REV__ENSG00000235387|ENST00000443779|SPAAR;REV__nc|ENSG00000235387|A0A1B0GVQ0|SPAAR	44.377184641726394	0.5088115166961078	2				NaN	NaN	0	NaN	7983	3650	11632
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11636	31.85	NaN	3764.9	30	0	480.97	0.106	+			26157	LSQPESPVL	9	59	485.26574431985364	968.5169357065073	2	485.26568603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSQPESPVL_	CROCC|p.Q588Pfs*15|1|0.33|ENSG00000058453|chr1:16940044-16940045|-/CC|frameshift_variant;ENSG00000058453|ENST00000375541|CROCC	47.657333605630114	0.33044192980041115	2				NaN	NaN	0	NaN	7984	3650	11632
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11637	31.852	NaN	1956.9	30	0	359.43	0.106	+			46548	VFHDQLHTF	9	59	572.2819074128148	1142.5492618924295	2	572.283447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VFHDQLHTF_	ENSG00000100784|ENST00000614987|RPS6KA5;nc|ENSG00000100784|O75582-2|RPS6KA5;nc|ENSG00000100784|O75582-3|RPS6KA5	56.43379154798735	0.2433427591689151	2				NaN	NaN	0	NaN	7985	3650	11632
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11638	31.854	NaN	2921.3	30	0	398.64	0.106	+			46140	VDMVPGKPM	9	64	487.2450288060802	972.4755046789604	2	487.2452697753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VDMVPGKPM_	ENSG00000156508|ENST00000309268|EEF1A1;ENST00000436459.2_1_9:135895553-135896258:+|nuORF;ENST00000547505.2_1_12:44054544-44054901:+|nuORF;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	51.33545320467046	0.2872990594074956	2				NaN	NaN	0	NaN	7986	3650	11632
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11639	31.855	NaN	2088.7	30	0	618.2	0.035				-1	ERPAPLAVL	9	61	504.2975857022328	1006.5806184712657	2	504.2978210449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))ERPAPLAVL_	ENSG00000162413|ENST00000377658|KLHL21;nc|ENSG00000162413|Q9UJP4-2|KLHL21	60.97194046774394	0.20551255781574032	2				NaN	NaN	0	NaN	7987	3650	11632
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11650	31.881	NaN	18884	30	0	5237.7	0.214				-1	 	0	70	473.7892172379006	945.5638815426012	2	473.7891540527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7995	3653	11649
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11651	31.884	NaN	18988	30	0	1630.5	0.106				-1	 	0	86	479.78718470785634	957.5598164825127	2	479.7872009277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7996	3653	11649
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11652	31.886	NaN	7736	30	0	1303.3	0.106			+	49702	VYLLHKQDF	9	59	388.2125978955112	1161.6159642867335	3	388.21435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYLLHKQDF_	REV__ENST00000324817.5_1_X:40510337-40510415:-|nuORF	42.396135135203025	0.392153681582562	2				NaN	NaN	0	NaN	7997	3653	11649
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11653	31.888	NaN	3399.3	30	0	433.4	0.106	+			22476	KTMYEVFQR	9	56	401.205163181093	1200.593660143479	3	401.2056884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTMYEVFQR_	ENSG00000197142|ENST00000354655|ACSL5;nc|ENSG00000197142|Q9ULC5-3|ACSL5;nc|ENSG00000197142|Q9ULC5-4|ACSL5	41.42661286455405	0.403525789677298	2				NaN	NaN	0	NaN	7998	3653	11649
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11654	31.89	NaN	2967.2	30	0	298.16	0.106				-1	 	0	60	485.2372764699643	484.2300000033643	1	485.2371520996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7999	3653	11649
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11655	31.892	NaN	2253.6	30	0	891.97	0.036				-1	SIPMTRFAP	9	37	345.8476307476824	1034.5210628432471	3	345.8476867675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_SIPM(Oxidation (M))TRFAP_	ENST00000358825.9_1_11:129825441-129830819:-|nuORF;ENST00000527581.5_2_11:129817219-129830810:-|nuORF	32.81241826257853	0.4965981579233955	2				NaN	NaN	0	NaN	8000	3653	11649
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11656	31.892	NaN	2069.8	30	0	302.64	0.14			+	7228	DAKWTMFM	8	68	515.2281544607592	1028.4417559883184	2	515.2281494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DAKWTMFM_	REV__HERV35I-int_dup77|chr3:106541134-106546233:+|1.3860853119714591|0.1976016791882729|2.81|468.0|126|2|sense	35.61828744233558	0.6843154725607303	2				NaN	NaN	0	NaN	8001	3653	11649
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11669	31.921	NaN	10848	30	0	2335.8	0.214	+			3466	ASSALFMAK	9	74	463.2435296720008	924.4725064108017	2	463.2439880371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASSALFMAK_	ENSG00000125651|ENST00000394456|GTF2F1;GTF2F1|p.E356G|1|0.16|ENSG00000125651|chr19:6381147-6381147|T/C|missense_variant	65.46538089061403	0.16805504838372562	2				NaN	NaN	0	NaN	8011	3656	11668
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11670	31.925	NaN	10601	30	0	2612.8	0.106	+			50832	YETKTALL	8	74	469.7628791913515	937.511205449503	2	469.7629089355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YETKTALL_	ENSG00000100242|ENST00000689035|SUN2;nc|ENSG00000100242|Q9UH99-2|SUN2;nc|ENSG00000100242|Q9UH99-3|SUN2	56.72105179125745	0.5342425954139568	2				NaN	NaN	0	NaN	8012	3656	11668
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11671	31.927	NaN	9487.2	30	0	2012.9	0.106				-1	 	0	64	498.29169065766115	994.5688283821223	2	498.2920227050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8013	3656	11668
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11672	31.929	NaN	3826	30	0	591.81	0.106	+			37445	SLIEFLKQK	9	74	553.3339552825446	1104.653357631889	2	553.3350830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLIEFLKQK_	ENSG00000007545|ENST00000397412|CRAMP1;ENST00000454337.1_1_16:1697048-1706838:+|nuORF	56.72105179125745	0.24094814563026265	2				NaN	NaN	0	NaN	8014	3656	11668
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11673	31.93	NaN	4373.6	30	0	844.56	0.106			+	36981	SINKDALL	8	64	437.254994129531	872.495435325862	2	437.2555847167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SINKDALL_	REV__ENSG00000175518|ENST00000380184|UBQLNL;REV__nc|ENSG00000175518|Q8IYU4-2|UBQLNL	66.42927471994793	0.4381325844043345	2				NaN	NaN	0	NaN	8015	3656	11668
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11674	31.932	NaN	7232.5	30	0	979.01	0.106			+	17534	IDQIQFRL	8	68	516.7947004136538	1031.5748478941075	2	516.7953491210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IDQIQFRL_	REV__ENSG00000070182|ENST00000644917|SPTB;REV__ENSG00000115306|ENST00000356805|SPTBN1;REV__ENSG00000173898|ENST00000533211|SPTBN2;REV__nc|ENSG00000070182|P11277-3|SPTB;REV__nc|ENSG00000070182|P11277|SPTB;REV__nc|ENSG00000115306|Q01082-2|SPTBN1;REV__nc|ENSG00000115306|Q01082-3|SPTBN1;REV__nc|ENSG00000173898|O15020-2|SPTBN2;REV__SPTBN1|p.K503Rfs*24|1|0.06|ENSG00000115306|chr2:54626095-54626095|G/-|frameshift_variant;REV__SPTBN2|p.P924Qfs*35|1|0.39|ENSG00000173898|chr11:66701629-66701629|G/-|frameshift_variant	47.657333605630114	0.6087971902037268	2				NaN	NaN	0	NaN	8016	3656	11668
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11675	31.934	NaN	3822	30	0	210.36	0.035	+			41210	SVLEGSGLPR	10	73	507.78211596583685	1013.5496789984737	2	507.78271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVLEGSGLPR_	ENSG00000083544|ENST00000377881|TDRD3;nc|ENSG00000083544|Q9H7E2-2|TDRD3;nc|ENSG00000083544|Q9H7E2|TDRD3;TDRD3|p.R406Kfs*3|1|0.3|ENSG00000083544|chr13:60528713-60528714|-/A|frameshift_variant	68.84614121027924	0.2867470276772903	2				NaN	NaN	0	NaN	8017	3656	11668
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11687	31.96	NaN	27423	30	0	3481.7	0.214	+			12664	GEITGEVHM	9	75	486.7256868062662	971.4368206793324	2	486.72613525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEITGEVHM_	ENSG00000136068|ENST00000295956|FLNB;ENST00000481470.5_1_3:58118395-58154450:+|nuORF;nc|ENSG00000136068|O75369-2|FLNB;nc|ENSG00000136068|O75369-3|FLNB;nc|ENSG00000136068|O75369-4|FLNB;nc|ENSG00000136068|O75369-5|FLNB;nc|ENSG00000136068|O75369-6|FLNB;nc|ENSG00000136068|O75369-7|FLNB;nc|ENSG00000136068|O75369-8|FLNB;nc|ENSG00000136068|O75369-9|FLNB	147.69337715509954	0.007406765731929437	2				NaN	NaN	0	NaN	8026	3659	11686
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11688	31.963	NaN	15955	30	0	4083.3	0.106	+			31763	QPFYHDDSY	9	63	586.2377739687439	1170.4609950042877	2	586.2383422851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QPFYHDDSY_	ENSG00000171223|ENST00000302754|JUNB;JUNB|p.G115Vfs*35|2|0.33|ENSG00000171223|chr19:12792111-12792111|G/-|frameshift_variant;JUNB|p.G126Afs*24|1|0.32|ENSG00000171223|chr19:12792144-12792144|G/-|frameshift_variant;JUNB|p.S28Yfs*7|1|0.17|ENSG00000171223|chr19:12791850-12791853|CTCT/-|frameshift_variant	47.91560031466742	0.327412564698279	2				NaN	NaN	0	NaN	8027	3659	11686
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11689	31.965	NaN	9923.6	30	0	5176.1	0.106	+			37065	SISDKFFQK	9	49	367.1972713671576	1098.5699847016729	3	367.19757080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SISDKFFQK_	ENSG00000089472|ENST00000343002|HEPH;HEPH|p.R1086Qfs*4|1|0.29|ENSG00000089472|chrX:66266444-66266445|-/C|frameshift_variant;nc|ENSG00000089472|Q9BQS7-2|HEPH;nc|ENSG00000089472|Q9BQS7-3|HEPH;nc|ENSG00000089472|Q9BQS7-4|HEPH	25.450171626174864	0.5654022654467333	2				NaN	NaN	0	NaN	8028	3659	11686
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11690	31.967	NaN	5173.5	30	0	938.76	0.106	+			39453	STEPIYVYK	9	65	550.2867238673225	1098.558894801445	2	550.2874755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STEPIYVYK_	ENSG00000179889|ENST00000396410|PDXDC1;nc|ENSG00000179889|Q6P996-3|PDXDC1;nc|ENSG00000179889|Q6P996-4|PDXDC1;nc|ENSG00000179889|Q6P996-5|PDXDC1;PDXDC1|p.P706Tfs*3|1|0.06|ENSG00000179889|chr16:15036023-15036024|-/A|frameshift_variant	79.45101966838831	0.09992237243120712	2				NaN	NaN	0	NaN	8029	3659	11686
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11691	31.969	NaN	3437	30	0	537.78	0.106	+			5931	AVLHTVLLH	9	65	501.8079822196145	1001.601411506029	2	501.8082580566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVLHTVLLH_	ENSG00000123395|ENST00000336854|ATG101	88.64286706044652	0.06869153472052109	2				NaN	NaN	0	NaN	8030	3659	11686
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11692	31.97	NaN	8060	30	0	3561.1	0.037			+	19538	KCEEWLAMM	9	64	570.7482283032983	1139.4819036733966	2	570.74951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KCEEWLAMM_	REV__ENSG00000120885|ENST00000316403|CLU;REV__ENST00000522299.5_1_8:27457218-27472184:-|nuORF;REV__nc|ENSG00000120885|P10909-2|CLU;REV__nc|ENSG00000120885|P10909-4|CLU;REV__nc|ENSG00000120885|P10909-5|CLU;REV__nc|ENSG00000120885|P10909-6|CLU	28.081489160057373	0.5408112046645406	2				NaN	NaN	0	NaN	8031	3659	11686
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11693	31.971	NaN	3841.3	30	0	773.46	0.141	+			32951	REDDPVRML	9	62	565.784105989119	1129.5536590450379	2	565.784912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_REDDPVRML_	ENSG00000005700|ENST00000306270|IBTK;ENST00000369751.2_1_6:82901346-82950269:-|nuORF;IBTK|p.K1213Sfs*50|1|0.13|ENSG00000005700|chr6:82181966-82181966|T/-|frameshift_variant;IBTK|p.M1160*|1|0.13|ENSG00000005700|chr6:82191170-82191170|T/-|frameshift_variant;nc|ENSG00000005700|Q9P2D0-2|IBTK	37.81151784470057	0.4459294069877048	2				NaN	NaN	0	NaN	8032	3659	11686
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11705	31.998	NaN	59077	30	0	11134	0.215	+			42815	TEARFGAQL	9	85	496.7610246910723	991.5074964489446	2	496.7615661621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEARFGAQL_	CON__P08727;ENSG00000171345|ENST00000361566|KRT19	90.60085204095205	0.06317133949006545	2				NaN	NaN	0	NaN	8041	3662	11704
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11706	32.002	NaN	6465.3	30	0	561.06	0.106	+			45476	TYDKGYQF	8	68	511.23470403999266	1020.4548551467853	2	511.2347106933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TYDKGYQF_	ENSG00000139197|ENST00000675855|PEX5;nc|ENSG00000139197|P50542-2|PEX5;nc|ENSG00000139197|P50542-3|PEX5;nc|ENSG00000139197|P50542-4|PEX5	82.24051045832904	0.30490469762271794	2				NaN	NaN	0	NaN	8042	3662	11704
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11707	32.004	NaN	4333.1	30	0	633.18	0.106	+			50762	YEKLGSTDL	9	70	513.2606047168093	1024.5066565004186	2	513.2608032226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YEKLGSTDL_	ENSG00000105726|ENST00000357324|ATP13A1;ENST00000473243.5_1_19:19762333-19765368:-|nuORF;nc|ENSG00000105726|Q9HD20-2|ATP13A1	76.16968421966216	0.11411088698345859	2				NaN	NaN	0	NaN	8043	3662	11704
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11708	32.006	NaN	2904.1	30	0	429.32	0.106			+	10381	EVARGPKL	8	52	435.2631858494903	868.5118187657806	2	435.26361083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EVARGPKL_	REV__ENSG00000061987|ENST00000393630|MON2;REV__ENST00000547095.5_1_12:62864501-62986526:+|nuORF;REV__MON2|p.A1027Vfs*94|1|0.03|ENSG00000061987|chr12:62553043-62553044|-/TTCTTTTT|frameshift_variant;REV__MON2|p.E989Nfs*2|1|0.16|ENSG00000061987|chr12:62552924-62552924|A/-|frameshift_variant;REV__MON2|p.T1274Qfs*3|1|0.36|ENSG00000061987|chr12:62560894-62560894|T/-|frameshift_variant;REV__MON2|p.V1435Afs*17|1|0.03|ENSG00000061987|chr12:62566430-62566431|-/CATCT|frameshift_variant;REV__nc|ENSG00000061987|Q7Z3U7-2|MON2;REV__nc|ENSG00000061987|Q7Z3U7-5|MON2;REV__nc|ENSG00000061987|Q7Z3U7-6|MON2	42.47446043378293	0.6409579893742323	2				NaN	NaN	0	NaN	8044	3662	11704
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11709	32.008	NaN	3139.1	30	0	218.35	0.106	+			50768	YEKPEAPEL	9	67	538.2683422241855	1074.522131515171	2	538.2695922851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YEKPEAPEL_	ENSG00000138801|ENST00000265174|PAPSS1	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	8045	3662	11704
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11710	32.009	NaN	3407.7	30	0	486.94	0.037	+			18171	ILSQEECSST	10	71	577.2566836997674	1152.4988144663348	2	577.2578735351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_ILSQEEC(Carbamidomethyl (C))SST_	ENSG00000174576|ENST00000311034|NPAS4	45.97224482568171	0.49411383603842696	2				NaN	NaN	0	NaN	8046	3662	11704
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11711	32.01	NaN	5026.9	30	0	492.43	0.14	+			2956	ASEPSVGVSG	10	64	445.21634342249064	888.4181339117813	2	445.2166748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASEPSVGVSG_	ENSG00000205592|ENST00000454784|MUC19;nc|ENSG00000205592|Q7Z5P9-2|MUC19	58.78195531508484	0.37691818691852547	2				NaN	NaN	0	NaN	8047	3662	11704
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11725	32.042	NaN	21935	30	0	3375.1	0.214				-1	 	0	89	480.27332145966415	958.5320899861283	2	480.2735290527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8058	3665	11724
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11726	32.045	NaN	3343.4	30	0	424.98	0.106	+			11153	FGISSVPTK	9	56	468.26306293056166	934.5115729279233	2	468.26300048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FGISSVPTK_	ENSG00000205323|ENST00000336133|SARNP;ENST00000552207.1_1_12:56188062-56211500:-|nuORF	54.722347961057174	0.257609425301511	2				NaN	NaN	0	NaN	8059	3665	11724
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11727	32.047	NaN	4729.8	30	0	542.86	0.106	+			36197	SELLITKA	8	70	437.76525244495804	873.5159519567161	2	437.7654724121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SELLITKA_	ENSG00000197879|ENST00000648651|MYO1C;nc|ENSG00000197879|O00159-2|MYO1C;nc|ENSG00000197879|O00159-3|MYO1C	77.31757898189308	0.345924878368729	2				NaN	NaN	0	NaN	8060	3665	11724
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11728	32.049	NaN	6353	30	0	1260.6	0.106	+			32839	RCPLCGLLT	9	63	516.771940105816	NaN	0	516.7708129882812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_RCPLC(Carbamidomethyl (C))GLLT_	ENST00000378536.4_1_1:2240387-2240723:+|nuORF	68.78682469695295	0.1118430353446351	2				NaN	NaN	0	NaN	8061	3665	11724
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11729	32.051	NaN	4933.6	30	0	663.31	0.106	+			7163	DAFRLLAQY	9	62	548.7923279355823	1095.5701029379645	2	548.7935180664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DAFRLLAQY_	ENSG00000177182|ENST00000325897|CLVS1;ENST00000521189.1_1_8:62212560-62289213:+|nuORF;nc|ENSG00000177182|Q8IUQ0-2|CLVS1	35.61828744233558	0.47037581924408073	2				NaN	NaN	0	NaN	8062	3665	11724
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11730	32.052	NaN	5595.7	30	0	758.95	0.034			+	26054	LSLPARSPS	9	65	464.26634685260683	926.5181407720137	2	464.26593017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSLPARSPS_	REV__ENST00000390289.2_1_22:22673091-22673434:+|nuORF	56.43379154798735	0.2433427591689151	2				NaN	NaN	0	NaN	8063	3665	11724
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11731	32.053	NaN	4793	30	0	920.29	0.14			+	9410	EKGYIGIKT	9	75	504.7901150793618	1007.5656772255236	2	504.7903137207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EKGYIGIKT_	REV__tr|U7T3N0|U7T3N0_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00466PE=4SV=1	58.22992032128504	0.22837015374068087	2				NaN	NaN	0	NaN	8064	3665	11724
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11743	32.08	NaN	15697	30	0	8150.2	0.214	+			38076	SPSSVSNTF	9	65	463.2162871465618	924.4180213599236	2	463.2166442871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SPSSVSNTF_	ENSG00000145113|ENST00000463781|MUC4;MUC4|p.L3985Ffs*274|1|0.3|ENSG00000145113|chr3:195779627-195779627|G/-|frameshift_variant;MUC4|p.N4902Tfs*8|1|0.37|ENSG00000145113|chr3:195761027-195761027|T/-|frameshift_variant;nc|ENSG00000145113|Q99102-10|MUC4;nc|ENSG00000145113|Q99102-11|MUC4;nc|ENSG00000145113|Q99102-15|MUC4;nc|ENSG00000145113|Q99102-16|MUC4;nc|ENSG00000145113|Q99102-17|MUC4;nc|ENSG00000145113|Q99102-2|MUC4;nc|ENSG00000145113|Q99102-3|MUC4;nc|ENSG00000145113|Q99102-5|MUC4;nc|ENSG00000145113|Q99102-7|MUC4;nc|ENSG00000145113|Q99102-8|MUC4;nc|ENSG00000145113|Q99102-9|MUC4	136.26810882979174	0.012230845423532208	2				NaN	NaN	0	NaN	8073	3668	11742
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11744	32.084	NaN	4478.4	30	0	1232.9	0.106			+	-1	FMAAACALLA	10	69	499.24576028286606	996.4769676325321	2	499.24603271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_FM(Oxidation (M))AAACALLA_	REV__ADCY6|p.L190M|1|0.5|ENSG00000174233|chr12:48782867-48782867|G/T|missense_variant	26.79610172149135	0.6610034878437611	2				NaN	NaN	0	NaN	8074	3668	11742
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11745	32.086	NaN	1983.1	30	0	519.46	0.106	+			2482	APPPAPAA	8	36	346.19198568354665	690.3694184338933	2	346.19219970703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_APPPAPAA_	ENSG00000164379|ENST00000296839|FOXQ1;nc|ENSG00000141858|Q6SPF0|SAMD1;REV__ENST00000436008.6_1_6:3457041-3457176:-|nuORF	24.504012794735996	0.7701314986472447	2				NaN	NaN	0	NaN	8075	3668	11742
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11746	32.088	NaN	3028.5	30	0	288.59	0.106	+			41498	SVPGSQYLY	9	62	507.24989093807875	1012.4852289429575	2	507.2508850097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVPGSQYLY_	ENSG00000187742|ENST00000375807|SECISBP2;nc|ENSG00000187742|Q96T21-2|SECISBP2;nc|ENSG00000187742|Q96T21-3|SECISBP2	34.172542307311794	0.4838870758800184	2				NaN	NaN	0	NaN	8076	3668	11742
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11747	32.09	NaN	3281.2	30	0	278.34	0.106	+			34803	RYLEKPMEI	9	66	589.8150338830266	1177.615514832853	2	590.3173217773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RYLEKPMEI_	ENSG00000168610|ENST00000264657|STAT3;nc|ENSG00000168610|P40763-2|STAT3;nc|ENSG00000168610|P40763-3|STAT3;STAT3|p.R729Afs*3|2|0.33|ENSG00000168610|chr17:42316861-42316861|G/-|frameshift_variant	33.921630207806714	0.48623198279849766	2				NaN	NaN	0	NaN	8077	3668	11742
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11748	32.091	NaN	2750.6	30	0	490.79	0.106			+	24163	LELSVPGK	8	45	421.75225302990714	841.4899531266143	2	421.752685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LELSVPGK_	REV__ENST00000377897.8_1_11:62574741-62574918:-|nuORF	51.33545320467046	0.5859736979383976	2				NaN	NaN	0	NaN	8078	3668	11742
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11749	32.093	NaN	3049.5	30	0	441.95	0.036	+			36761	SHLRGNDSAD	10	71	536.2454697154088	1070.4763864976176	2	536.2468872070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SHLRGNDSAD_	ENSG00000135127|ENST00000548673|BICDL1;nc|ENSG00000135127|Q6ZP65-2|BICDL1;nc|ENSG00000135127|Q6ZP65|BICDL1	35.15202426646627	0.5927656479315102	2				NaN	NaN	0	NaN	8079	3668	11742
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11762	32.121	NaN	11466	30	0	1727.4	0.214	+			30226	PSSPASSQF	9	79	454.21077118317163	906.4069894331433	2	454.2110900878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PSSPASSQF_	BRD8|p.P1065Lfs*29|1|0.14|ENSG00000112983|chr5:138149724-138149724|G/-|frameshift_variant;ENSG00000112983|ENST00000254900|BRD8;nc|ENSG00000112983|Q9H0E9-2|BRD8;nc|ENSG00000112983|Q9H0E9-3|BRD8;nc|ENSG00000112983|Q9H0E9-4|BRD8	68.78682469695295	0.14603441672067394	2				NaN	NaN	0	NaN	8089	3671	11761
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11763	32.124	NaN	8053.9	30	0	993.12	0.106			+	47507	VQLKMILK	8	78	486.8167452451914	971.6189375571828	2	486.81719970703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VQLKMILK_	REV__ENST00000311893.13_1_12:108962937-108963123:+|nuORF	94.00642277110589	0.2653416297186628	2				NaN	NaN	0	NaN	8090	3671	11761
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11764	32.126	NaN	21739	30	0	5988.5	0.106				-1	 	0	59	386.20441868414036	1155.591426652621	3	386.20477294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8091	3671	11761
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11765	32.128	NaN	18094	30	0	2181.4	0.106				-1	 	0	84	535.3048401528866	1068.5951273725732	2	535.3059692382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8092	3671	11761
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11766	32.13	NaN	6364.2	30	0	2357.5	0.106			+	26838	LVVASIVRF	9	64	502.3182139270535	1002.621874920907	2	502.31854248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LVVASIVRF_	REV__ABCB11|p.A1028V|1|0.54|ENSG00000073734|chr2:168932507-168932507|G/A|missense_variant;REV__ABCB11|p.K1070Nfs*27|1|0.17|ENSG00000073734|chr2:168932380-168932380|T/-|frameshift_variant;REV__ABCB11|p.Q1053Nfs*44|1|0.2|ENSG00000073734|chr2:168932434-168932434|A/-|frameshift_variant;REV__ABCB11|p.V1293Wfs*2|2|0.26|ENSG00000073734|chr2:168923711-168923711|C/-|frameshift_variant;REV__ENSG00000073734|ENST00000650372|ABCB11	37.81151784470057	0.4459294069877048	2				NaN	NaN	0	NaN	8093	3671	11761
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11767	32.131	NaN	8171	30	0	3138.4	0.106	+			32364	QVAEIVSKY	9	69	518.7869554155112	1035.5593578978223	2	518.78759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QVAEIVSKY_	ENSG00000138448|ENST00000261023|ITGAV;ITGAV|p.G401Efs*13|1|0.4|ENSG00000138448|chr2:186646721-186646721|A/-|frameshift_variant;ITGAV|p.G561Dfs*2|4|0.23|ENSG00000138448|chr2:186656358-186656358|G/-|frameshift_variant;ITGAV|p.V806Hfs*11|1|0.07|ENSG00000138448|chr2:186667758-186667759|-/CATTTTCAAAA|frameshift_variant;nc|ENSG00000138448|P06756-2|ITGAV;nc|ENSG00000138448|P06756-3|ITGAV	114.8945686534367	0.024290463251177924	2				NaN	NaN	0	NaN	8094	3671	11761
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11768	32.133	NaN	3108.7	30	0	623.33	0.035	+			22201	KSTFVNILK	9	68	525.3209034444532	1048.6272539557062	2	525.3216552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KSTFVNILK_	ENSG00000156136|ENST00000286648|DCK	63.53385203322761	0.18415635464017938	2				NaN	NaN	0	NaN	8095	3671	11761
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11781	32.161	NaN	11848	30	0	2915.7	0.214				-1	 	0	60	382.5603852684519	1144.6593264055557	3	382.56072998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8105	3674	11780
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11782	32.164	NaN	14337	30	0	2256.7	0.106	+			26437	LTGPVMPVR	9	77	485.28056421914164	968.5465755050833	2	485.2811279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LTGPVMPVR_	ENSG00000167526|ENST00000311528|RPL13;ENST00000399461.8_1_16:89627605-89629447:+|nuORF;ENST00000484610.5_1_16:89627907-89629447:+|nuORF;ENST00000570149.1_1_16:89628679-89629447:+|nuORF;nc|ENSG00000167526|P26373-2|RPL13	113.41158876095287	0.025516849225023126	2				NaN	NaN	0	NaN	8106	3674	11780
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11783	32.166	NaN	7686.5	30	0	737.02	0.106	+			43946	TPDPSRSVF	9	78	503.25321360831254	1004.4918742834251	2	503.2538757324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TPDPSRSVF_	ENSG00000141295|ENST00000290216|SCRN2;ENST00000581645.5_1_17:45915212-45916069:-|nuORF;nc|ENSG00000141295|Q96FV2-2|SCRN2	49.536043120802724	0.308405419312776	2				NaN	NaN	0	NaN	8107	3674	11780
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11784	32.168	NaN	7463.7	30	0	951.3	0.106				-1	 	0	70	419.59378003546135	1255.759510706584	3	419.59429931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8108	3674	11780
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11785	32.17	NaN	3873.2	30	0	942.69	0.106	+			48996	VVGLPNVGK	9	52	441.7735582256224	881.5325635180449	2	441.77386474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVGLPNVGK_	ENSG00000130119|ENST00000360845|GNL3L	47.91560031466742	0.327412564698279	2				NaN	NaN	0	NaN	8109	3674	11780
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11786	32.172	NaN	3607.3	30	0	2359.7	0.03			+	25106	LLPPKLPTK	9	41	336.22740842959286	NaN	0	336.2273864746094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LLPPKLPTK_	REV__SPEN|p.N2053Tfs*11|1|0.43|ENSG00000065526|chr1:15932394-15932394|A/-|frameshift_variant	12.811709888998246	0.3936198799427492	2				NaN	NaN	0	NaN	8110	3674	11780
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11787	32.172	NaN	3480.9	30	0	549.19	0.143	+			14122	GSLRDSALFVK	11	53	398.22725563717864	1191.659937511736	3	398.2278747558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GSLRDSALFVK_	ENSG00000179604|ENST00000335793|CDC42EP4	53.01288593483079	0.3858247291064905	2				NaN	NaN	0	NaN	8111	3674	11780
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11802	32.206	NaN	29605	30	0	10224	0.214	+			13135	GGMSIFLKK	9	77	327.5243877237863	979.5513337715588	3	327.52471923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GGMSIFLKK_	ENST00000264995.7_1_3:131220431-131221595:-|nuORF	68.78682469695295	0.14603441672067394	2				NaN	NaN	0	NaN	8123	3677	11801
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11803	32.209	NaN	13531	30	0	1947.4	0.106				-1	 	0	70	492.7947493283192	983.5749457234384	2	492.7951965332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8124	3677	11801
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11804	32.211	NaN	7826.4	30	0	1781.5	0.106	+			25749	LSAAPSTPVI	10	62	478.27565624775445	954.5367595623089	2	478.2758483886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSAAPSTPVI_	ENST00000506603.5_1_5:79058805-79095436:+|nuORF	47.657333605630114	0.47858658696240314	2				NaN	NaN	0	NaN	8125	3677	11801
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11805	32.213	NaN	3556.1	30	0	545.45	0.106	+			25431	LPNNAKLEM	9	67	515.2723596150803	1028.5301662969605	2	515.2734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LPNNAKLEM_	ENSG00000169696|ENST00000306739|ASPSCR1;nc|ENSG00000169696|Q9BZE9-2|ASPSCR1	101.25262130126117	0.03792372629710479	2				NaN	NaN	0	NaN	8126	3677	11801
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11806	32.215	NaN	4266.8	30	0	516.12	0.106	+			27217	MEKGDMVTL	9	65	520.2429935209724	1038.4714341087447	2	520.243896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_M(Oxidation (M))EKGDMVTL_	ENSG00000182551|ENST00000327435|ADI1;nc|ENSG00000182551|Q9BV57-2|ADI1	49.536043120802724	0.308405419312776	2				NaN	NaN	0	NaN	8127	3677	11801
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11807	32.217	NaN	6735.1	30	0	598.83	0.034	+			24143	LELDAVTLA	9	76	472.76839044572137	943.5222279582428	2	472.7686462402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LELDAVTLA_	ENSG00000142494|ENST00000270570|SLC47A1;ENST00000497548.5_1_17:19437252-19459239:+|nuORF;ENST00000571335.5_1_17:19445708-19459199:+|nuORF;nc|ENSG00000142494|Q96FL8-2|SLC47A1;nc|ENSG00000142494|Q96FL8-3|SLC47A1	45.9519527083369	0.35044536499095585	2				NaN	NaN	0	NaN	8128	3677	11801
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11808	32.217	NaN	3877	30	0	411.15	0.138			+	18719	ITGLSLAKP	9	60	450.28106630162637	898.5475796700528	2	450.2813415527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ITGLSLAKP_	REV__MACF1|p.P924Hfs*52|1|0.23|ENSG00000127603|chr1:39303040-39303040|C/-|frameshift_variant	65.46538089061403	0.16805504838372562	2				NaN	NaN	0	NaN	8129	3677	11801
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11819	32.244	NaN	9109.3	30	0	1260.5	0.214			+	26839	LVVAVGWFI	9	74	502.3042624975119	1002.5939720618238	2	502.3047790527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LVVAVGWFI_	REV__ENSG00000183780|ENST00000366618|SLC35F3;REV__nc|ENSG00000183780|Q8IY50|SLC35F3	60.403631409065575	0.21025000616765316	2				NaN	NaN	0	NaN	8137	3680	11818
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11820	32.248	NaN	6572.2	30	0	1341.3	0.106	+			9828	EPIVNGHIN	9	78	496.7610246910723	991.5074964489446	2	498.2618713378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EPIVNGHIN_	ENSG00000121904|ENST00000373381|CSMD2;nc|ENSG00000121904|Q7Z408|CSMD2	37.15910966729921	0.4535818937225704	2				NaN	NaN	0	NaN	8138	3680	11818
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11821	32.25	NaN	9435.8	30	0	1085.9	0.106	+			24121	LEKSMEPSL	9	87	517.2656047166462	1032.5166565000923	2	517.2654418945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LEKSMEPSL_	ENSG00000123338|ENST00000293373|NCKAP1L;ENST00000547500.1_1_12:54891564-54894436:+|nuORF;NCKAP1L|p.L134Sfs*11|1|0.04|ENSG00000123338|chr12:54508424-54508425|-/AGTGCTCAATATATTCCGAGTGAATCTAT|frameshift_variant	124.08010499294276	0.018729767491916592	2				NaN	NaN	0	NaN	8139	3680	11818
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11822	32.252	NaN	7809.1	30	0	1781.6	0.106	+			49993	WANVGKSL	8	73	437.7423051363728	873.4700573395456	2	437.7425231933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_WANVGKSL_	ENSG00000109452|ENST00000262992|INPP4B;ENST00000512630.5_1_4:143007384-143094853:-|nuORF	71.87747018426188	0.391254423828572	2				NaN	NaN	0	NaN	8140	3680	11818
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11823	32.254	NaN	5718.5	30	0	802.83	0.106				-1	 	0	63	460.75898117913056	919.5034094250611	2	460.75927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8141	3680	11818
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11824	32.255	NaN	2267.8	30	0	290.75	0.106			+	21359	KMAPPLPL	8	51	433.7612946978856	865.5080364625712	2	433.7617492675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KMAPPLPL_	REV__ENSG00000111671|ENST00000524270|SPSB2	29.841539824830324	0.7289191502596711	2				NaN	NaN	0	NaN	8142	3680	11818
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11825	32.257	NaN	2675.9	30	0	710.55	0.031				-1	 	0	38	357.73013848049385	713.4457240277877	2	357.7303771972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8143	3680	11818
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11838	32.284	NaN	9768	30	0	791.26	0.214	+			3776	ATAEVLNIGK	10	77	508.29221610074126	1014.5698792682825	2	508.2926025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATAEVLNIGK_	ENSG00000128050|ENST00000512576|PAICS;ENST00000510584.1_1_4:57302478-57308067:+|nuORF;nc|ENSG00000128050|P22234-2|PAICS	128.60217544463768	0.01518043149187549	2				NaN	NaN	0	NaN	8153	3683	11837
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11839	32.288	NaN	24463	30	0	7236.3	0.106	+			15145	GTSELLLAK	9	78	466.2762248334798	930.5378967337596	2	466.276611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTSELLLAK_	ASAP1|p.P792Lfs*20|1|0.1|ENSG00000153317|chr8:130112120-130112120|G/-|frameshift_variant;ASAP2|p.H548Qfs*57|1|0.14|ENSG00000151693|chr2:9374842-9374842|C/-|frameshift_variant;ASAP2|p.L787Afs*16|1|0.31|ENSG00000151693|chr2:9388513-9388514|-/C|frameshift_variant;ENSG00000151693|ENST00000281419|ASAP2;ENSG00000153317|ENST00000518721|ASAP1;nc|ENSG00000151693|O43150-2|ASAP2;nc|ENSG00000153317|Q9ULH1-2|ASAP1	95.81516180277367	0.04847050768394289	2				NaN	NaN	0	NaN	8154	3683	11837
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11840	32.29	NaN	4288.8	30	0	434.55	0.106	+			10775	FAGPCKVI	8	63	446.2406393535593	890.4667257739186	2	446.2412414550781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_FAGPC(Carbamidomethyl (C))KVI_	ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC;PRKDC|p.D2437Wfs*3|1|0.11|ENSG00000253729|chr8:47840161-47840162|-/CA|frameshift_variant;PRKDC|p.E1557Sfs*16|1|0.16|ENSG00000253729|chr8:47886051-47886051|C/-|frameshift_variant;PRKDC|p.G1227Vfs*50|2|0.31|ENSG00000253729|chr8:47893306-47893306|C/-|frameshift_variant;PRKDC|p.K3681Nfs*6|1|0.32|ENSG00000253729|chr8:47785174-47785177|TTCT/-|frameshift_variant;PRKDC|p.M3670*|1|0.5|ENSG00000253729|chr8:47785212-47785212|T/-|frameshift_variant;PRKDC|p.M3846Cfs*12|1|0.13|ENSG00000253729|chr8:47779047-47779047|T/-|frameshift_variant;PRKDC|p.M4020Cfs*2|1|0.31|ENSG00000253729|chr8:47776968-47776968|T/-|frameshift_variant;PRKDC|p.N3605Kfs*3|1|0.22|ENSG00000253729|chr8:47788993-47788994|-/T|frameshift_variant;PRKDC|p.N4037Ifs*15|1|0.17|ENSG00000253729|chr8:47776916-47776916|T/-|frameshift_variant;PRKDC|p.R2704Gfs*13|2|0.34|ENSG00000253729|chr8:47834238-47834238|T/-|frameshift_variant;PRKDC|p.S3402Ifs*16|1|0.04|ENSG00000253729|chr8:47799302-47799303|-/AAACCGTGAGTTAGAGGAGGTAA|frameshift_variant;PRKDC|p.S4099Qfs*6|1|0.25|ENSG00000253729|chr8:47774265-47774265|A/-|frameshift_variant;PRKDC|p.T3268Pfs*7|1|0.5|ENSG00000253729|chr8:47803426-47803426|T/-|frameshift_variant;PRKDC|p.W3401Cfs*4|1|0.01|ENSG00000253729|chr8:47799304-47799305|-/AATGAATA|frameshift_variant	83.28718786952967	0.2977916691876266	2				NaN	NaN	0	NaN	8155	3683	11837
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11841	32.292	NaN	5255.8	30	0	1489.3	0.106	+			16869	HPGLILKY	8	64	470.78443777743473	939.5543226216695	2	470.7841491699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HPGLILKY_	ENSG00000099991|ENST00000263119|CABIN1;nc|ENSG00000099991|Q9Y6J0-2|CABIN1	54.76467175910256	0.5536104764165384	2				NaN	NaN	0	NaN	8156	3683	11837
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11842	32.294	NaN	3191.2	30	0	1154.9	0.106				-1	 	0	70	542.768714245369	1083.5228755575379	2	542.7697143554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8157	3683	11837
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11843	32.295	NaN	5154.9	30	0	371.8	0.106	+			17725	IENLKFEK	8	70	510.78943358873056	1019.5643142442611	2	510.7900695800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IENLKFEK_	tr|U7SYR2|U7SYR2_FUSNUPLDphosphodiesterasedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00883PE=4SV=1	54.722347961057174	0.5540294759312786	2				NaN	NaN	0	NaN	8158	3683	11837
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11844	32.297	NaN	5777.5	30	0	688.46	0.033	+			41491	SVPEAQSAL	9	70	451.23439801532686	900.4542430974537	2	451.23504638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVPEAQSAL_	ENSG00000086666|ENST00000261749|ZFAND6;ENST00000561017.1_1_15:80414070-80415156:+|nuORF;nc|ENSG00000086666|Q6FIF0-2|ZFAND6	80.45461616416974	0.09558281504443908	2				NaN	NaN	0	NaN	8159	3683	11837
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11857	32.325	NaN	15105	30	0	9544.1	0.214	+			31231	QGYDKIIFK	9	64	556.310719367166	1110.606885801132	2	556.311279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QGYDKIIFK_	ENSG00000095110|ENST00000534921|NXPE1;nc|ENSG00000095110|Q8N323-2|NXPE1;NXPE1|p.E304Gfs*35|1|0.11|ENSG00000095110|chr11:114523075-114523076|TT/-|frameshift_variant	85.86182877749512	0.07653218437724067	2				NaN	NaN	0	NaN	8169	3686	11856
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11858	32.328	NaN	2383.2	30	0	476.14	0.106			+	13588	GLVHRYHSI	9	44	361.2012681872525	1080.5819751619574	3	361.2014465332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GLVHRYHSI_	REV__ENSG00000163581|ENST00000314251|SLC2A2;REV__SLC2A2|p.G186Efs*65|1|0.39|ENSG00000163581|chr3:171007203-171007203|C/-|frameshift_variant;REV__SLC2A2|p.P78Tfs*6|1|0.11|ENSG00000163581|chr3:171014608-171014609|-/T|frameshift_variant	19.359975847455235	0.6112419832031293	2				NaN	NaN	0	NaN	8170	3686	11856
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11859	32.33	NaN	5057.5	30	0	632.01	0.106	+			29273	NYGPMKGGSF	10	80	529.2411228862934	1056.4676928393867	2	529.24267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NYGPMKGGSF_	ENSG00000170144|ENST00000392524|HNRNPA3;ENST00000451198.2_1_20:35249346-35249823:+|nuORF;ENST00000472163.1_1_3:75263799-75264780:+|nuORF;nc|ENSG00000170144|P51991-2|HNRNPA3	58.22992032128504	0.38193887838457763	2				NaN	NaN	0	NaN	8171	3686	11856
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11860	32.332	NaN	3894.4	30	0	1531.9	0.106			+	24302	LFEKEPHLS	9	46	367.1972713671576	1098.5699847016729	3	367.19757080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LFEKEPHLS_	REV__ENSG00000023734|ENST00000419869|STRAP;REV__ENST00000536737.1_1_12:16050816-16050996:+|nuORF;REV__nc|ENSG00000023734|Q9Y3F4-2|STRAP	19.359975847455235	0.6112419832031293	2				NaN	NaN	0	NaN	8172	3686	11856
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11861	32.334	NaN	2925.2	30	0	1235.6	0.106	+			48132	VSVPRVVKF	9	39	344.21824478366085	1029.6329049511826	3	344.21826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSVPRVVKF_	ENSG00000154358|ENST00000680850|OBSCN;nc|ENSG00000154358|Q5VST9-2|OBSCN;nc|ENSG00000154358|Q5VST9-3|OBSCN;nc|ENSG00000154358|Q5VST9-5|OBSCN;nc|ENSG00000154358|Q5VST9-6|OBSCN;nc|ENSG00000154358|Q5VST9|OBSCN;OBSCN|p.E4688Dfs*35|1|0.03|ENSG00000154358|chr1:228318105-228318106|-/CATCTTC|frameshift_variant;OBSCN|p.E4729Rfs*7|1|0.37|ENSG00000154358|chr1:228318930-228318931|-/C|frameshift_variant;OBSCN|p.H7050Tfs*22|1|0.11|ENSG00000154358|chr1:228371922-228371922|C/-|frameshift_variant;OBSCN|p.P6994Lfs*78|1|0.15|ENSG00000154358|chr1:228371756-228371756|C/-|frameshift_variant;OBSCN|p.S5232Ffs*24|1|0.21|ENSG00000154358|chr1:228332900-228332901|-/T|frameshift_variant;OBSCN|p.V3709Sfs*15|1|0.03|ENSG00000154358|chr1:228293609-228293610|-/A|frameshift_variant	24.519189625965996	0.574102787014149	2				NaN	NaN	0	NaN	8173	3686	11856
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11862	32.335	NaN	2819.4	30	0	584.1	0.106	+			24573	LGNLSTVLP	9	66	457.27115863589484	NaN	0	457.2710266113281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LGNLSTVLP_	ENSG00000115310|ENST00000337526|RTN4;nc|ENSG00000115310|Q9NQC3-6|RTN4;RTN4|p.K423Nfs*32|1|0.38|ENSG00000115310|chr2:55026830-55026830|T/-|frameshift_variant;RTN4|p.K969Efs*10|1|0.04|ENSG00000115310|chr2:55025195-55025196|-/GGGAACATTCC|frameshift_variant;RTN4|p.L340Pfs*3|1|0.04|ENSG00000115310|chr2:55027080-55027081|-/G|frameshift_variant;RTN4|p.R854Sfs*2|1|0.05|ENSG00000115310|chr2:55025537-55025538|-/AA|frameshift_variant;RTN4|p.V670Sfs*9|1|0.38|ENSG00000115310|chr2:55026091-55026092|-/T|frameshift_variant;RTN4|p.V670Yfs*4|4|0.29|ENSG00000115310|chr2:55026092-55026092|T/-|frameshift_variant	37.15910966729921	0.2899585034171616	2				NaN	NaN	0	NaN	8174	3686	11856
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11863	32.337	NaN	4601.9	30	0	862.1	0.038				-1	DMVQIRKSLG	10	50	388.2125978955112	1161.6159642867335	3	388.544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_DM(Oxidation (M))VQIRKSLG_	ABCA3|p.G1334Afs*12|1|0.4|ENSG00000167972|chr16:2283220-2283220|C/-|frameshift_variant;ABCA3|p.S746Pfs*15|1|0.32|ENSG00000167972|chr16:2297357-2297357|C/-|frameshift_variant;ENSG00000167972|ENST00000301732|ABCA3;ENST00000563623.5_1_16:2339371-2378589:-|nuORF	27.047317107675042	0.6589519614906109	2				NaN	NaN	0	NaN	8175	3686	11856
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11874	32.363	NaN	81335	30	0	19434	0.214	+			6138	AVQEFGLAR	9	83	495.77180124969414	989.5290495661883	2	495.7716979980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVQEFGLAR_	ENSG00000169230|ENST00000303204|PRELID1;nc|ENSG00000169230|Q9Y255-2|PRELID1	204.624747049445	1.3753862112523631E-05	2				NaN	NaN	0	NaN	8183	3689	11873
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11875	32.366	NaN	7917.4	30	0	897.24	0.106	+			16310	HEIEALKSF	9	83	537.2843086763752	1072.5540644195503	2	537.2852783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HEIEALKSF_	ENSG00000078618|ENST00000352171|NRDC;nc|ENSG00000078618|O43847-2|NRDC	150.36159442982594	0.006784847064083231	2				NaN	NaN	0	NaN	8184	3689	11873
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11876	32.368	NaN	9046	30	0	1600.8	0.106	+			28419	NETVAIHSL	9	71	492.26110860017764	982.5076642671553	2	492.2611083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NETVAIHSL_	ENSG00000082269|ENST00000418814|FAM135A;FAM135A|p.N1165Ifs*3|1|0.07|ENSG00000082269|chr6:70526577-70526578|-/T|frameshift_variant;FAM135A|p.N999Ifs*5|1|0.39|ENSG00000082269|chr6:70526073-70526073|A/-|frameshift_variant;FAM135A|p.N999Kfs*2|1|0.18|ENSG00000082269|chr6:70526072-70526073|-/A|frameshift_variant;nc|ENSG00000082269|Q9P2D6-2|FAM135A;nc|ENSG00000082269|Q9P2D6-3|FAM135A;nc|ENSG00000082269|Q9P2D6-4|FAM135A	153.03582135801034	0.006161527642367307	2				NaN	NaN	0	NaN	8185	3689	11873
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11877	32.37	NaN	7670.5	30	0	578.84	0.106	+			27608	MPNSPAPHF	9	71	499.23104690770856	996.4475408822171	2	499.2313232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MPNSPAPHF_	ENSG00000112297|ENST00000633556|CRYBG1;nc|ENSG00000112297|Q9Y4K1-1|CRYBG1	77.31757898189308	0.1091473830098891	2				NaN	NaN	0	NaN	8186	3689	11873
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11878	32.372	NaN	7728.4	30	0	1839.4	0.106	+			50525	YAPSGNYV	8	56	435.70289394297595	869.3912349527519	2	435.70294189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YAPSGNYV_	ENSG00000078369|ENST00000378609|GNB1;ENSG00000114450|ENST00000232564|GNB4;nc|ENSG00000078369|P62873-2|GNB1	79.45101966838831	0.3281480470254892	2				NaN	NaN	0	NaN	8187	3689	11873
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11879	32.374	NaN	8127.1	30	0	2747.1	0.034	+			16738	HLNSDKLI	8	71	470.26620010854236	938.5178472838847	2	470.26611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HLNSDKLI_	DNA2|p.E1036D|1|0.22|ENSG00000138346|chr10:68416715-68416715|T/G|missense_variant	40.77816245573522	0.6514838689002179	2				NaN	NaN	0	NaN	8188	3689	11873
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11880	32.374	NaN	3950.1	30	0	658.52	0.14	+			51199	YPNSGSVSAY	10	64	522.735087586849	1043.4556222404979	2	522.7352905273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YPNSGSVSAY_	ENSG00000136068|ENST00000295956|FLNB;ENST00000481470.5_1_3:58118395-58154450:+|nuORF;nc|ENSG00000136068|O75369-2|FLNB;nc|ENSG00000136068|O75369-3|FLNB;nc|ENSG00000136068|O75369-4|FLNB;nc|ENSG00000136068|O75369-5|FLNB;nc|ENSG00000136068|O75369-6|FLNB;nc|ENSG00000136068|O75369-7|FLNB;nc|ENSG00000136068|O75369-8|FLNB;nc|ENSG00000136068|O75369-9|FLNB	49.536043120802724	0.461275219792494	2				NaN	NaN	0	NaN	8189	3689	11873
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11893	32.403	NaN	15734	30	0	2412.4	0.214			+	10176	ETAAPPPQL	9	88	462.2447117531369	922.4748705730739	2	462.2448425292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ETAAPPPQL_	REV__ENSG00000171847|ENST00000538603|FAM90A1;REV__nc|ENSG00000205879|Q658T7|FAM90A2P;REV__nc|ENSG00000215354|P0C7X0|FAM90A24;REV__nc|ENSG00000215373|A8MXJ8|FAM90A5;REV__nc|ENSG00000223885|P0C7W8|FAM90A13;REV__nc|ENSG00000230045|P0C7V4|FAM90A15;REV__nc|ENSG00000233115|A0A8V8TNH8|FAM90A11;REV__nc|ENSG00000233132|A0A8V8TPE2|FAM90A3;REV__nc|ENSG00000233295|A6NIJ5|FAM90A20;REV__nc|ENSG00000254229|A8MX19|FAM90A12;REV__nc|ENSG00000285657|P0DV76|FAM90A19;REV__nc|ENSG00000285687|A8MWA6|FAM90A22;REV__nc|ENSG00000285720|P0DV74|FAM90A17;REV__nc|ENSG00000285765|A8MXZ1|FAM90A23;REV__nc|ENSG00000285814|P0C7W9|FAM90A14;REV__nc|ENSG00000285937|A6NJQ4|FAM90A8;REV__nc|ENSG00000285950|A6NDY2|FAM90A10;REV__nc|ENSG00000285975|A6NKC0|FAM90A7;REV__nc|ENSG00000285975|A6NNJ1|FAM90A9	66.42927471994793	0.16001998865088202	2				NaN	NaN	0	NaN	8199	3692	11892
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11894	32.407	NaN	14190	30	0	5515.7	0.106	+			38016	SPMESTQSL	9	64	490.2230063745961	978.4314598159922	2	490.22344970703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SPMESTQSL_	ENSG00000131242|ENST00000621161|RAB11FIP4;nc|ENSG00000131242|Q86YS3-2|RAB11FIP4	127.46168284122857	0.016682644177004526	2				NaN	NaN	0	NaN	8200	3692	11892
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11895	32.409	NaN	3969.1	30	0	508.81	0.106	+			23721	LAVEKAAEL	9	61	472.2760041577722	942.5374553823444	2	472.2760925292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LAVEKAAEL_	ENSG00000198554|ENST00000360586|WDHD1;nc|ENSG00000198554|O75717-2|WDHD1	93.1432384553994	0.056003526918089595	2				NaN	NaN	0	NaN	8201	3692	11892
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11896	32.411	NaN	7037.1	30	0	1318.5	0.106			+	48350	VTGLVVAPR	9	67	456.28679321228367	910.5590334913674	2	456.286865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTGLVVAPR_	REV__ENST00000264956.10_2_4:5815433-5815706:+|nuORF	51.33545320467046	0.2872990594074956	2				NaN	NaN	0	NaN	8202	3692	11892
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11897	32.413	NaN	7012.6	30	0	888.92	0.106			+	43530	TGTNVLFVY	9	68	507.26879705124117	1012.5230411692824	2	507.2693786621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TGTNVLFVY_	REV__ENSG00000023287|ENST00000025008|RB1CC1;REV__nc|ENSG00000023287|Q8TDY2-2|RB1CC1;REV__RB1CC1|p.F304Lfs*6|1|0.47|ENSG00000023287|chr8:52673935-52673935|A/-|frameshift_variant;REV__RB1CC1|p.K964Sfs*13|1|0.31|ENSG00000023287|chr8:52656938-52656938|T/-|frameshift_variant;REV__RB1CC1|p.L547Ffs*7|1|0.05|ENSG00000023287|chr8:52660644-52660645|-/A|frameshift_variant;REV__RB1CC1|p.L965Afs*4|1|0.35|ENSG00000023287|chr8:52656937-52656938|-/T|frameshift_variant;REV__RB1CC1|p.N872Kfs*2|1|0.31|ENSG00000023287|chr8:52657213-52657214|-/T|frameshift_variant	49.44154591367651	0.3095138337212152	2				NaN	NaN	0	NaN	8203	3692	11892
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11898	32.414	NaN	5876.7	30	0	933.37	0.036			+	34200	RTDIVFDNL	9	76	546.7875685485105	1091.560584163821	2	546.7880249023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RTDIVFDNL_	REV__tr|U7T5C6|U7T5C6_FUSNUBacterialvirulenceproteinVirB8domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00016PE=4SV=1	66.96192283764107	0.15557981141143568	2				NaN	NaN	0	NaN	8204	3692	11892
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11899	32.415	NaN	5471.2	30	0	1029.8	0.14	+			40468	STVTPSSAL	9	53	431.7289793775424	861.4434058218848	2	431.7292175292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STVTPSSAL_	ENSG00000117983|ENST00000529681|MUC5B;ENSG00000117983|ENST00000529681|MUC5B;ENSG00000117983|ENST00000529681|MUC5B;MUC5B|p.E2929Gfs*98|1|0.13|ENSG00000117983|chr11:1245660-1245661|-/GC|frameshift_variant;MUC5B|p.P3417Qfs*3|1|0.41|ENSG00000117983|chr11:1247125-1247125|C/-|frameshift_variant;MUC5B|p.S3126Pfs*13|1|0.37|ENSG00000117983|chr11:1246251-1246251|C/-|frameshift_variant;MUC5B|p.S3878Pfs*27|1|0.13|ENSG00000117983|chr11:1248507-1248507|C/-|frameshift_variant;MUC5B|p.S3878Pfs*27|1|0.13|ENSG00000117983|chr11:1248507-1248507|C/-|frameshift_variant;MUC5B|p.S4017Lfs*56|1|0.22|ENSG00000117983|chr11:1248928-1248929|-/C|frameshift_variant;MUC5B|p.S4017Lfs*56|1|0.22|ENSG00000117983|chr11:1248928-1248929|-/C|frameshift_variant;MUC5B|p.S4017Lfs*56|1|0.22|ENSG00000117983|chr11:1248928-1248929|-/C|frameshift_variant;MUC5B|p.T4706Pfs*4|2|0.37|ENSG00000117983|chr11:1250996-1250996|A/-|frameshift_variant;MUC5B|p.T4706Pfs*4|2|0.37|ENSG00000117983|chr11:1250996-1250996|A/-|frameshift_variant;MUC5B|p.T4706Pfs*4|2|0.37|ENSG00000117983|chr11:1250996-1250996|A/-|frameshift_variant	99.37495909608758	0.03983967222258828	2				NaN	NaN	0	NaN	8205	3692	11892
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11914	32.447	NaN	18713	30	0	2712.3	0.214	+			30449	PYTKVEESF	9	92	550.2688207379783	1098.5230885427566	2	550.2695922851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PYTKVEESF_	ENSG00000182858|ENST00000330817|ALG12	163.1509380574825	0.003936019289634439	2				NaN	NaN	0	NaN	8217	3695	11913
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11915	32.451	NaN	6835.1	30	0	1541.2	0.106			+	25860	LSFGGAVNVV	10	68	481.7702120894592	961.5258712457185	2	481.7704162597656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSFGGAVNVV_	REV__ENSG00000169733|ENST00000310496|RFNG;REV__ENST00000580953.5_1_17:80006604-80007747:-|nuORF;REV__ENST00000582478.5_1_17:80006905-80007747:-|nuORF;REV__ENST00000583784.1_1_17:80006905-80007133:-|nuORF	74.25504064058377	0.24255678544297835	2				NaN	NaN	0	NaN	8218	3695	11913
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11916	32.453	NaN	5260.1	30	0	886.13	0.106	+			32911	RDVIMREF	8	85	533.2784361789405	1064.542319424681	2	533.2797241210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RDVIMREF_	ENSG00000156976|ENST00000323963|EIF4A2;ENSG00000161960|ENST00000293831|EIF4A1;ENST00000461021.1_1_3:186505247-186505672:+|nuORF;ENST00000468362.5_1_3:186503755-186505556:+|nuORF;ENST00000485101.5_1_3:186505247-186505556:+|nuORF;ENST00000492144.5_1_3:186503809-186505672:+|nuORF;ENST00000494445.1_1_3:186505247-186506105:+|nuORF;ENST00000578324.5_1_17:7477602-7481249:+|nuORF;ENST00000581544.5_1_17:7477924-7481249:+|nuORF;ENST00000581621.1_1_17:7476159-7481249:+|nuORF;ENST00000581808.1_1_17:7481021-7481457:+|nuORF;ENST00000587313.1_1_18:12913551-12913704:+|nuORF;nc|ENSG00000156976|Q14240-2|EIF4A2;nc|ENSG00000161960|P60842-2|EIF4A1	96.0336014099291	0.25920480862606965	2				NaN	NaN	0	NaN	8219	3695	11913
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11917	32.455	NaN	4161.5	30	0	1861.5	0.106			+	34223	RTFGPAAT	8	56	410.7187703289643	819.4229877247286	2	410.71929931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RTFGPAAT_	REV__DQX1|p.L497F|1|0.19|ENSG00000144045|chr2:74522586-74522586|G/A|missense_variant;REV__ENSG00000144045|ENST00000404568|DQX1;REV__nc|ENSG00000144045|Q8TE96-2|DQX1	39.252832667884924	0.6609488554722044	2				NaN	NaN	0	NaN	8220	3695	11913
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11918	32.456	NaN	2844.9	30	0	424.83	0.106	+			48248	VTDETFLEK	9	69	541.2756346789337	1080.5367164246672	2	541.2745361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTDETFLEK_	ENSG00000128641|ENST00000392318|MYO1B;ENST00000494129.1_1_2:192246088-192252282:+|nuORF;MYO1B|p.A603Sfs*37|1|0.42|ENSG00000128641|chr2:191390310-191390311|-/A|frameshift_variant;MYO1B|p.F948Cfs*47|1|0.41|ENSG00000128641|chr2:191411140-191411141|-/TG|frameshift_variant;MYO1B|p.S730Afs*4|2|0.4|ENSG00000128641|chr2:191393178-191393178|A/-|frameshift_variant;nc|ENSG00000128641|O43795-2|MYO1B	47.95952297671804	0.32689736945648856	2				NaN	NaN	0	NaN	8221	3695	11913
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11919	32.458	NaN	3485.2	30	0	358.25	0.106				-1	 	0	61	414.74440729686853	827.4742616605371	2	414.7447814941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8222	3695	11913
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11920	32.46	NaN	2643.1	30	0	1024.2	0.036			+	20003	KEIFEKKL	8	36	345.54608953230405	1033.6164391971122	3	345.5462646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KEIFEKKL_	REV__EEA1|p.N1389Mfs*3|1|0.33|ENSG00000102189|chr12:92776081-92776081|T/-|frameshift_variant;REV__ENSG00000102189|ENST00000322349|EEA1	24.20275056022122	0.7724576178584145	2				NaN	NaN	0	NaN	8223	3695	11913
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11931	32.485	NaN	6911.5	30	0	1884.6	0.214	+			46230	VEAVEQNTL	9	67	501.7588736108655	NaN	0	501.7590026855469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VEAVEQNTL_	ENSG00000142669|ENST00000270792|SH3BGRL3;ENST00000319041.6_1_1:26607416-26607611:+|nuORF	66.96192283764107	0.11962625698446946	2				NaN	NaN	0	NaN	8231	3698	11930
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11932	32.489	NaN	5052.7	30	0	659.41	0.106	+			50819	YESAKVLNV	9	65	511.77894847413944	NaN	0	511.7793273925781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YESAKVLNV_	ENSG00000130222|ENST00000252506|GADD45G	47.657333605630114	0.2228375344433429	2				NaN	NaN	0	NaN	8232	3698	11930
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11933	32.491	NaN	3641.7	30	0	775.43	0.106	+			3959	ATATLIIEH	9	63	484.7741607822444	NaN	0	484.7742004394531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATATLIIEH_	ENSG00000100522|ENST00000216410|GNPNAT1;ENST00000553987.1_1_14:53248483-53250189:-|nuORF	93.19546047674547	0.03515475374905802	2				NaN	NaN	0	NaN	8233	3698	11930
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11934	32.493	NaN	2678.9	30	0	264.34	0.106			+	37734	SLTLNANNIA	10	71	515.7801966872473	NaN	0	515.7801513671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLTLNANNIA_	REV__tr|U7SWR2|U7SWR2_FUSNUAutotransporterdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00953PE=4SV=1	42.86426827375447	0.3507156137006061	2				NaN	NaN	0	NaN	8234	3698	11930
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11935	32.494	NaN	4746.5	30	0	935.51	0.106	+			20581	KFVNKSYLL	9	65	556.3284778175372	1110.6424027018743	2	556.3297729492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KFVNKSYLL_	ENSG00000144736|ENST00000325599|SHQ1;nc|ENSG00000144736|Q6PI26-2|SHQ1	51.19269402634007	0.2889735674168909	2				NaN	NaN	0	NaN	8235	3698	11930
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11936	32.496	NaN	1926.5	30	0	160.03	0.037			+	-1	SPFYPQCVY	9	61	580.756201790259	1159.4978506473178	2	580.7574462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_SPFYPQC(Carbamidomethyl (C))VY_	REV__nc|ENSG00000143442|Q7Z3K3-3|POGZ	31.954861631926434	0.5046124803899898	2				NaN	NaN	0	NaN	8236	3698	11930
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11937	32.497	NaN	2010.7	30	0	222.25	0.141	+			5433	ATYPKIWVK	9	61	553.3235438059821	1104.6325346787642	2	553.324462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATYPKIWVK_	ENSG00000243649|ENST00000425368|CFB;nc|ENSG00000243649|P00751-2|CFB	42.86426827375447	0.38666266728046506	2				NaN	NaN	0	NaN	8237	3698	11930
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11948	32.524	NaN	24956	30	0	3745.4	0.214				-1	 	0	73	457.78655883540847	913.558564737617	2	457.7870178222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8245	3701	11947
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11949	32.528	NaN	11506	30	0	3844.1	0.106	+			45037	TVGEVFYTK	9	78	522.2735831335349	1042.5326133338697	2	522.2744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVGEVFYTK_	ENSG00000204385|ENST00000229729|SLC44A4;nc|ENSG00000204385|Q53GD3-3|SLC44A4;SLC44A4|p.F618Sfs*25|1|0.43|ENSG00000204385|chr6:31864889-31864889|A/-|frameshift_variant;SLC44A4|p.G398Afs*7|1|0.29|ENSG00000204385|chr6:31869197-31869197|G/-|frameshift_variant;SLC44A4|p.N144Kfs*55|2|0.31|ENSG00000204385|chr6:31874757-31874758|-/T|frameshift_variant;SLC44A4|p.S619Lfs*9|1|0.31|ENSG00000204385|chr6:31864888-31864889|-/A|frameshift_variant	112.10723106719422	0.02684780151337622	2				NaN	NaN	0	NaN	8246	3701	11947
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11950	32.53	NaN	11777	30	0	1825.6	0.106				-1	 	0	65	470.7945326400326	939.5745123468653	2	470.7948303222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8247	3701	11947
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11951	32.531	NaN	2774.9	30	0	356.91	0.106	+			8559	EAVVENPLN	9	59	492.753226869619	NaN	0	492.752685546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EAVVENPLN_	ENSG00000253305|ENST00000520790|PCDHGB6;ENSG00000254122|ENST00000398594|PCDHGB7;nc|ENSG00000253305|Q9Y5F9-2|PCDHGB6;nc|ENSG00000254122|Q9Y5F8-2|PCDHGB7	71.87747018426188	0.0992163553043454	2				NaN	NaN	0	NaN	8248	3701	11947
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11952	32.533	NaN	3585.7	30	0	345.89	0.106			+	44071	TPSSGDENEI	10	73	524.7239404869403	NaN	0	524.723876953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TPSSGDENEI_	REV__ENSG00000235568|ENST00000329021|NFAM1	35.15202426646627	0.38475398474706135	2				NaN	NaN	0	NaN	8249	3701	11947
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11953	32.535	NaN	1612.9	30	0	134.04	0.033			+	49413	VVVAEPLR	8	59	441.7735582256224	881.5325635180449	2	441.7745056152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VVVAEPLR_	REV__ENST00000291416.9_1_1:33611549-33612008:-|nuORF	45.9519527083369	0.6193794311207887	2				NaN	NaN	0	NaN	8250	3701	11947
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11954	32.536	NaN	2673.4	30	0	279.92	0.139	+			48474	VTLTCQSPL	9	65	481.25414319574764	960.4937334582953	2	481.2544250488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VTLTCQSPL_	CON__Q2KJF1	67.49366992349736	0.1516260258713357	2				NaN	NaN	0	NaN	8251	3701	11947
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11967	32.565	NaN	44154	30	0	12471	0.198				-1	 	0	74	450.28128763089217	898.5480223285844	2	450.281494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8261	3704	11966
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11968	32.568	NaN	4480	30	0	1043.2	0.106	+			37722	SLSVTAAMK	9	65	454.24880351629247	906.483054099385	2	454.2492370605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLSVTAAMK_	ENST00000324695.8_1_2:234873347-234879062:+|nuORF	49.44154591367651	0.3095138337212152	2				NaN	NaN	0	NaN	8262	3704	11966
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11969	32.57	NaN	15050	30	0	6035.4	0.106				-1	 	0	74	465.28643423609617	928.5583155389924	2	465.2868347167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8263	3704	11966
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11970	32.572	NaN	4522.7	30	0	729.02	0.106			+	2261	ALVMQMYLQ	9	70	548.7793646183538	1095.5441763035076	2	548.7802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ALVMQMYLQ_	REV__ENSG00000140853|ENST00000688547|NLRC5;REV__nc|ENSG00000140853|Q86WI3-2|NLRC5;REV__nc|ENSG00000140853|Q86WI3-3|NLRC5;REV__nc|ENSG00000140853|Q86WI3-4|NLRC5;REV__nc|ENSG00000140853|Q86WI3-5|NLRC5;REV__nc|ENSG00000140853|Q86WI3-6|NLRC5;REV__NLRC5|p.F487Lfs*8|1|0.48|ENSG00000140853|chr16:57026401-57026401|T/-|frameshift_variant;REV__NLRC5|p.G450Wfs*105|2|0.23|ENSG00000140853|chr16:57026283-57026284|-/C|frameshift_variant;REV__NLRC5|p.H1717Ifs*29|2|0.41|ENSG00000140853|chr16:57079112-57079112|C/-|frameshift_variant;REV__NLRC5|p.K611Rfs*3|1|0.42|ENSG00000140853|chr16:57026773-57026773|A/-|frameshift_variant;REV__NLRC5|p.P449Lfs*17|1|0.21|ENSG00000140853|chr16:57026284-57026284|C/-|frameshift_variant;REV__NLRC5|p.P816Rfs*30|1|0.28|ENSG00000140853|chr16:57031430-57031430|C/-|frameshift_variant	37.15910966729921	0.4535818937225704	2				NaN	NaN	0	NaN	8264	3704	11966
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11971	32.574	NaN	7850.7	30	0	1012.4	0.106	+			12804	GEMKGAIGL	9	73	438.23569190077416	874.4568308683483	2	438.2363586425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GEMKGAIGL_	ENSG00000005020|ENST00000345317|SKAP2	110.11987700582712	0.028875675806141952	2				NaN	NaN	0	NaN	8265	3704	11966
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11972	32.575	NaN	4459.5	30	0	480.51	0.106	+			19936	KEFIKIVEA	9	75	538.8206921880221	1075.6268314428441	2	538.8218994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KEFIKIVEA_	ENSG00000198898|ENST00000361183|CAPZA2;ENST00000426421.5_1_7:116544367-116557918:+|nuORF	94.4091291819064	0.0524345700464502	2				NaN	NaN	0	NaN	8266	3704	11966
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11973	32.577	NaN	3422.1	30	0	1403.9	0.035			+	-1	SLMCLQPLL	9	64	517.2747683197471	1032.534983706294	2	517.275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_SLM(Oxidation (M))CLQPLL_	REV__ENST00000314891.10_1_15:34651206-34652316:-|nuORF	29.14955571784316	0.5308295550522326	2				NaN	NaN	0	NaN	8267	3704	11966
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11986	32.605	NaN	11314	30	0	1567.3	0.214	+			5071	ATSKVALVY	9	66	476.27876712574135	950.5429813182827	2	476.279052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSKVALVY_	ENSG00000110955|ENST00000262030|ATP5F1B	44.377184641726394	0.36891676396732553	2				NaN	NaN	0	NaN	8277	3707	11985
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11987	32.608	NaN	2945.4	30	0	298.84	0.106	+			28305	NEFDAIQKA	9	74	518.2600411549545	1034.5055293767089	2	518.2593383789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NEFDAIQKA_	ENSG00000135476|ENST00000257934|ESPL1;nc|ENSG00000135476|Q14674-2|ESPL1	78.26377905018397	0.10505600812668463	2				NaN	NaN	0	NaN	8278	3707	11985
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11988	32.61	NaN	2847.5	30	0	461.12	0.106	+			23216	KYGHALLPG	9	56	478.27123931258075	954.5279256919615	2	478.2714538574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KYGHALLPG_	ENSG00000189134|ENST00000343684|NKAPL	26.79610172149135	0.5528238334041078	2				NaN	NaN	0	NaN	8279	3707	11985
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11989	32.612	NaN	2079.5	30	0	436.89	0.106	+			18327	IPVDMKDNY	9	62	547.7621192957228	1093.5096856582454	2	547.7626342773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IPVDMKDNY_	ANKEF1|p.Y712Sfs*5|1|0.07|ENSG00000132623|chr20:10054561-10054562|-/CCTGGAA|frameshift_variant;ENSG00000132623|ENST00000378392|ANKEF1	42.86426827375447	0.38666266728046506	2				NaN	NaN	0	NaN	8280	3707	11985
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11990	32.614	NaN	2546.7	30	0	544	0.106				-1	TCEASKATAQ	10	65	533.7448507791452	1065.4751486250902	2	533.7457885742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_TC(Carbamidomethyl (C))EASKATAQ_	CD101|p.P656Rfs*10|1|0.34|ENSG00000134256|chr1:117018505-117018505|C/-|frameshift_variant;ENSG00000134256|ENST00000682167|CD101	28.081489160057373	0.6505064946289502	2				NaN	NaN	0	NaN	8281	3707	11985
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11991	32.616	NaN	1510.4	30	0	194.5	0.106	+			45134	TVKVLTQG	8	48	423.25810160188917	844.5016502705784	2	423.2576599121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TVKVLTQG_	ENSG00000065526|ENST00000375759|SPEN	44.377184641726394	0.6291511924298419	2				NaN	NaN	0	NaN	8282	3707	11985
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11992	32.617	NaN	1875.6	30	0	161.93	0.036			+	26110	LSNTKFCIQ	9	67	527.2733764648438	NaN	0	527.2733764648438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSNTKFCIQ_	REV__ENST00000426654.6_1_16:69733899-69734280:+|nuORF	43.650786325866115	0.2504488100985368	2				NaN	NaN	0	NaN	8283	3707	11985
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12007	32.649	NaN	31510	30	0	4115.7	0.214	+			35307	SAMKAVTEL	9	80	475.2543138728877	948.4940748125754	2	475.25457763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAMKAVTEL_	ENSG00000128245|ENST00000248975|YWHAH	120.30596017624542	0.02101454110788768	2				NaN	NaN	0	NaN	8295	3710	12006
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12008	32.653	NaN	17065	30	0	3767.1	0.106				-1	 	0	79	497.29507877844384	992.5756046236877	2	497.29541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8296	3710	12006
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12009	32.655	NaN	7015.7	30	0	721.24	0.106	+			3162	ASINLNAINK	10	69	529.3025331963474	1056.5905134594948	2	529.3035888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASINLNAINK_	ENSG00000149925|ENST00000642816|ALDOA;ENST00000398050.3_1_10:127355642-127355750:-|nuORF;nc|ENSG00000149925|P04075|ALDOA	164.45504665044191	0.00544846538291036	2				NaN	NaN	0	NaN	8297	3710	12006
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12010	32.656	NaN	3334.9	30	0	333.17	0.106	+			33655	RNATDAVGIVL	11	67	564.8216088410534	1127.6286647489067	2	564.8225708007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RNATDAVGIVL_	ENSG00000132676|ENST00000368336|DAP3;ENST00000462978.1_1_1:155697409-155701908:+|nuORF;nc|ENSG00000132676|P51398-2|DAP3;nc|ENSG00000132676|P51398-3|DAP3	31.529811441608018	0.6590691889962369	2				NaN	NaN	0	NaN	8298	3710	12006
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12011	32.658	NaN	4528.5	30	0	1357	0.106				-1	CLSLLLPPLC	10	43	376.8767259615629	1127.6083484848887	3	376.87701416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_CLSLLLPPLC(Carbamidomethyl (C))_	ENST00000530994.5_1_11:118515264-118527530:+|nuORF	24.519189625965996	0.6795976720565101	2				NaN	NaN	0	NaN	8299	3710	12006
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12012	32.66	NaN	2370	30	0	251.63	0.035			+	11874	FTGSPNSLVV	10	63	510.77146694940234	1019.5283809656047	2	510.7715148925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FTGSPNSLVV_	REV__ADGRG6|p.F1083Lfs*9|1|0.32|ENSG00000112414|chr6:142420031-142420031|T/-|frameshift_variant;REV__ADGRG6|p.N504Ifs*9|1|0.31|ENSG00000112414|chr6:142397694-142397694|A/-|frameshift_variant;REV__ADGRG6|p.S1069Rfs*9|1|0.04|ENSG00000112414|chr6:142419991-142419992|-/GTCACATAAAA|frameshift_variant;REV__ENSG00000112414|ENST00000367609|ADGRG6;REV__ENST00000415128.6_1_6:142623466-142692070:+|nuORF;REV__ENST00000545477.1_1_6:142630681-142703096:+|nuORF;REV__nc|ENSG00000112414|Q86SQ4-2|ADGRG6;REV__nc|ENSG00000112414|Q86SQ4-4|ADGRG6;REV__nc|ENSG00000112414|Q86SQ4|ADGRG6	51.19269402634007	0.44601001148513897	2				NaN	NaN	0	NaN	8300	3710	12006
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12013	32.661	NaN	2898.3	30	0	277.18	0.141	+			17113	HSIVRRRY	8	66	543.818545899008	1085.6225388648159	2	543.8187866210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HSIVRRRY_	ENSG00000149929|ENST00000279392|HIRIP3;ENST00000563053.1_1_16:30005092-30006861:-|nuORF;ENST00000565996.1_1_16:30006421-30006926:-|nuORF;ENST00000568880.2_1_16:30006612-30006935:-|nuORF;nc|ENSG00000149929|Q9BW71-2|HIRIP3;nc|ENSG00000149929|Q9BW71-3|HIRIP3	34.172542307311794	0.6954784234644539	2				NaN	NaN	0	NaN	8301	3710	12006
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12027	32.691	NaN	14909	30	0	2198.4	0.214			+	27993	MVTGLRPK	8	75	451.26919142666304	900.5238299201261	2	451.2708435058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MVTGLRPK_	REV__ENSG00000153214|ENST00000283206|TMEM87B;REV__ENST00000463427.5_1_2:112843607-112863481:+|nuORF;REV__nc|ENSG00000153214|Q96K49-2|TMEM87B	65.80317337860623	0.44433089765398776	2				NaN	NaN	0	NaN	8312	3713	12026
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12028	32.695	NaN	8925.7	30	0	3895.7	0.106	+			13976	GSATSLVFK	9	61	455.25506261762575	908.4955723020515	2	455.25518798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSATSLVFK_	ENSG00000227345|ENST00000616448|PARG;PARG|p.D904Tfs*4|1|0.16|ENSG00000227345|chr10:49820231-49820231|C/-|frameshift_variant;PARG|p.N277Mfs*5|3|0.4|ENSG00000227345|chr10:49933618-49933618|T/-|frameshift_variant	115.49404669440601	0.023927554121326553	2				NaN	NaN	0	NaN	8313	3713	12026
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12029	32.697	NaN	5216.1	30	0	1039.8	0.106	+			41017	SVGTEMIITK	10	71	539.79331088315	1077.5720688330998	2	539.7942504882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVGTEMIITK_	ENSG00000149922|ENST00000395224|TBX6;nc|ENSG00000149922|O95947-2|TBX6;TBX6|p.A116Sfs*55|1|0.39|ENSG00000149922|chr16:30090765-30090766|-/T|frameshift_variant	86.88156770896713	0.14892753630261096	2				NaN	NaN	0	NaN	8314	3713	12026
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12030	32.698	NaN	3018.3	30	0	231.4	0.106	+			7809	DPMAMTQKY	9	70	542.7430549019209	1083.4715568706417	2	542.7440795898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DPMAMTQKY_	ENSG00000087365|ENST00000322535|SF3B2;ENST00000534765.1_1_11:65835264-65836005:+|nuORF	58.22992032128504	0.22837015374068087	2				NaN	NaN	0	NaN	8315	3713	12026
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12031	32.7	NaN	3851.3	30	0	497.87	0.106	+			35236	SALEKSLAV	9	67	459.26866583590925	NaN	0	459.2684326171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SALEKSLAV_	ENSG00000136682|ENST00000259199|ZNG1B;ENSG00000147996|ENST00000382405|ZNG1E;ENSG00000172785|ENST00000356521|ZNG1A;ENSG00000196873|ENST00000360171|ZNG1C;ENSG00000215126|ENST00000377391|ZNG1F;ENST00000358604.7_1_2:114196636-114253317:+|nuORF;ENST00000377445.5_9:69238165-69262487:-|nuORF;ENST00000470192.1_9:69256791-69261296:-|nuORF;ENST00000476973.2_9:69243634-69261296:-|nuORF;ENST00000490323.5_1_2:114195445-114201441:+|nuORF;ENST00000492566.1_1_2:114195517-114220159:+|nuORF;ENST00000495626.2_9:69245151-69262487:-|nuORF;nc|ENSG00000172785|Q9BRT8-2|ZNG1A;nc|ENSG00000172785|Q9BRT8-3|ZNG1A;nc|ENSG00000172785|Q9BRT8-4|ZNG1A;nc|ENSG00000196873|Q5JTY5-2|ZNG1C;nc|ENSG00000215126|Q5RIA9-3|ZNG1E	35.15202426646627	0.3000918603816441	2				NaN	NaN	0	NaN	8316	3713	12026
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12032	32.702	NaN	3820.6	30	0	311.51	0.106			+	-1	LCPHCTIQ	8	72	486.22674900699343	970.4389450807869	2	486.226806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_LCPHC(Carbamidomethyl (C))TIQ_	REV__ENST00000560260.5_1_15:64404820-64422215:+|nuORF	44.53106598305862	0.628196326904373	2				NaN	NaN	0	NaN	8317	3713	12026
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12033	32.704	NaN	5558.8	30	0	819.65	0.036	+			17576	IEAQLGDVRA	10	71	536.2924062486396	1070.5702595640792	2	536.294189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IEAQLGDVRA_	CON__P08727;ENSG00000171345|ENST00000361566|KRT19;ENST00000405746.1_1_6:72295335-72295494:+|nuORF;ENST00000557173.1_1_12:95228580-95228931:+|nuORF	72.09557110113691	0.26019946548822415	2				NaN	NaN	0	NaN	8318	3713	12026
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12046	32.731	NaN	12090	30	0	2170.1	0.215	+			28317	NEFTTHVM	8	81	489.7204758976406	977.4263988620812	2	489.7208557128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NEFTTHVM_	ENSG00000167081|ENST00000373489|PBX3;ENSG00000185630|ENST00000420696|PBX1;ENSG00000204304|ENST00000375050|PBX2;ENST00000478678.5_1_6:32154995-32157692:-|nuORF;ENST00000538998.1_1_9:128606084-128725334:+|nuORF;nc|ENSG00000167081|P40426-2|PBX3;nc|ENSG00000167081|P40426-5|PBX3;nc|ENSG00000185630|P40424-2|PBX1;nc|ENSG00000185630|P40424-3|PBX1	111.64827973302667	0.24425243057279236	2				NaN	NaN	0	NaN	8328	3716	12045
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12047	32.735	NaN	13567	30	0	3926	0.106	+			44802	TTQVVGILK	9	72	479.7998281440904	957.5851033549808	2	479.8000793457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTQVVGILK_	ENSG00000198898|ENST00000361183|CAPZA2;ENST00000426421.5_1_7:116544367-116557918:+|nuORF	85.86182877749512	0.07653218437724067	2				NaN	NaN	0	NaN	8329	3716	12045
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12048	32.737	NaN	17541	30	0	2779.6	0.106				-1	 	0	77	483.76583148795856	965.5171100427171	2	483.7659606933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8330	3716	12045
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12049	32.738	NaN	9537.6	30	0	3273.5	0.106	+			30797	QEALHTQML	9	76	535.7676854611591	1069.520817989118	2	535.7686767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QEALHTQML_	ENSG00000137076|ENST00000314888|TLN1;nc|ENSG00000137076|Q9Y490-2|TLN1	89.02883481214508	0.06760336634167786	2				NaN	NaN	0	NaN	8331	3716	12045
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12050	32.74	NaN	6687.9	30	0	534.52	0.106				-1	 	0	76	525.8056876122752	1049.5968222913502	2	525.8067016601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8332	3716	12045
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12051	32.742	NaN	4679.1	30	0	844.74	0.106	+			50358	WVPASRGEI	9	68	507.77165121436235	1013.5287494955247	2	507.7718811035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_WVPASRGEI_	nc|ENSG00000211611|A0A0C4DH24|IGKV6-21;nc|ENSG00000225523|A0A0A0MT36|IGKV6D-21	44.116797842482775	0.37197099687881774	2				NaN	NaN	0	NaN	8333	3716	12045
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12052	32.744	NaN	2009.8	30	0	652.56	0.036	+			8920	EEVKSFRVL	9	56	553.8131987537785	1105.6118445743568	2	553.814208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EEVKSFRVL_	ENSG00000139163|ENST00000266517|ETNK1;nc|ENSG00000139163|Q9HBU6-2|ETNK1;nc|ENSG00000139163|Q9HBU6|ETNK1	42.396135135203025	0.392153681582562	2				NaN	NaN	0	NaN	8334	3716	12045
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12063	32.769	NaN	17763	30	0	1382.6	0.214	+			34503	RVFVVGVGMTK	11	94	596.8467720232243	1191.6789911132485	2	596.8472900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVFVVGVGMTK_	ENSG00000116171|ENST00000371514|SCP2;ENST00000528311.5_1_1:53392996-53413692:+|nuORF;nc|ENSG00000116171|P22307-3|SCP2;nc|ENSG00000116171|P22307-7|SCP2;nc|ENSG00000116171|P22307-8|SCP2	147.57670432137974	7.454744483674588E-05	2				NaN	NaN	0	NaN	8342	3719	12062
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12064	32.773	NaN	5318.8	30	0	882.64	0.106	+			6139	AVQEFGLAR	9	63	495.77180124969414	989.5290495661883	2	495.7718200683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVQEFGLAR_	ENSG00000169230|ENST00000303204|PRELID1;nc|ENSG00000169230|Q9Y255-2|PRELID1	88.17693792209575	0.07000514020414955	2				NaN	NaN	0	NaN	8343	3719	12062
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12065	32.775	NaN	7229.1	30	0	799.98	0.106	+			36261	SENKLPAEL	9	77	500.76876208943423	999.5229712456685	2	500.7688293457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SENKLPAEL_	ENSG00000100823|ENST00000216714|APEX1;ENST00000557159.5_1_14:20924026-20925664:+|nuORF	96.0336014099291	0.047854655524928534	2				NaN	NaN	0	NaN	8344	3719	12062
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12066	32.776	NaN	3933.2	30	0	686.78	0.106	+			17642	IEKELETVC	9	66	532.2702967221811	1062.5260405111621	2	532.2711181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IEKELETVC_	ENSG00000128245|ENST00000248975|YWHAH;ENST00000397492.1_1_22:32346295-32352776:+|nuORF	61.691277971877994	0.19951612995419254	2				NaN	NaN	0	NaN	8345	3719	12062
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12067	32.778	NaN	4563.2	30	0	1558.2	0.106	+			41110	SVIRDYLVQK	10	58	407.57085389746663	1219.6907322926	3	407.5710144042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVIRDYLVQK_	ENSG00000160695|ENST00000621676|VPS11;nc|ENSG00000160695|Q9H270|VPS11	68.84614121027924	0.2867470276772903	2				NaN	NaN	0	NaN	8346	3719	12062
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12068	32.78	NaN	3782.8	30	0	811.25	0.106	+			49044	VVIGTPTLK	9	64	464.2968752256094	926.5791975180189	2	464.29681396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VVIGTPTLK_	ENSG00000171763|ENST00000305560|SPATA5L1;nc|ENSG00000171763|Q9BVQ7-2|AFG2B;SPATA5L1|p.K477Nfs*8|1|0.39|ENSG00000171763|chr15:45410524-45410524|A/-|frameshift_variant	56.72105179125745	0.24094814563026265	2				NaN	NaN	0	NaN	8347	3719	12062
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12069	32.782	NaN	2588.7	30	0	387.06	0.035	+			29842	PLAPQDFEE	9	62	523.2450474867629	1044.4755420403258	2	523.2459716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PLAPQDFEE_	ENSG00000177363|ENST00000317449|LRRN4CL;LRRN4CL|p.F108Lfs*50|1|0.21|ENSG00000177363|chr11:62688187-62688188|-/G|frameshift_variant	40.77816245573522	0.41113185337114944	2				NaN	NaN	0	NaN	8348	3719	12062
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12080	32.808	NaN	4477.1	30	0	569.36	0.214	+			8463	EASGRIYVY	9	75	529.2686101655288	1056.5226673978575	2	529.2693481445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EASGRIYVY_	ENSG00000136237|ENST00000665637|RAPGEF5;nc|ENSG00000136237|Q92565|RAPGEF5	108.08749611321984	0.03094949498378333	2				NaN	NaN	0	NaN	8356	3722	12079
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12081	32.812	NaN	7883.8	30	0	517.68	0.106			+	10262	ETLLNLICN	9	76	516.7754057229056	1031.536258512611	2	516.775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ETLLNLICN_	REV__ENSG00000084092|ENST00000264230|NOA1	74.25504064058377	0.12238981753128622	2				NaN	NaN	0	NaN	8357	3722	12079
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12082	32.814	NaN	3485.9	30	0	698.99	0.106				-1	LSLSLTLTFM	10	70	571.3135743599839	1140.6125957867678	2	571.3145141601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_LSLSLTLTFM(Oxidation (M))_	ENST00000355610.8_1_X:106184550-106184712:-|nuORF	44.377184641726394	0.5088115166961078	2				NaN	NaN	0	NaN	8358	3722	12079
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12083	32.815	NaN	2502.6	30	0	304.24	0.106	+			44755	TTMVPTAALAK	11	63	552.309674693665	1102.6047964541299	2	552.3104858398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TTMVPTAALAK_	ENSG00000197858|ENST00000355091|GPAA1;ENST00000529638.1_1_8:145140125-145141025:+|nuORF;ENST00000530796.1_1_8:145140395-145141025:+|nuORF;ENST00000534072.1_1_8:145139936-145140713:+|nuORF;nc|ENSG00000197858|O43292-2|GPAA1	46.45678178249821	0.46959456050452836	2				NaN	NaN	0	NaN	8359	3722	12079
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12084	32.817	NaN	732.49	30	0	104.46	0.106	+			18105	IKVWAVACF	9	32	346.1938255207601	NaN	0	346.1938171386719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IKVWAVACF_	AGO4|p.E724Kfs*16|1|0.24|ENSG00000134698|chr1:35841744-35841745|AG/-|frameshift_variant;ENSG00000134698|ENST00000373210|AGO4	19.996771675451527	0.3693019437812985	2				NaN	NaN	0	NaN	8360	3722	12079
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12085	32.819	NaN	1603.4	30	0	109.26	0.033			+	-1	SCSILIPS	8	51	438.7269818402299	875.4394107472598	2	438.72845458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_SC(Carbamidomethyl (C))SILIPS_	REV__OldhAT1_dup3754|chr16:69756515-69756565:+|2.8845354374206424|0.229716003740126|3.65|482.0|4|1|anti-sense	50.0245360154114	0.5941082100236891	2				NaN	NaN	0	NaN	8361	3722	12079
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12097	32.847	NaN	66677	30	0	11965	0.214	+			44265	TSALPIIQK	9	104	485.79967199447685	969.5847910557537	2	485.80010986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSALPIIQK_	ENSG00000147872|ENST00000276914|PLIN2;ENST00000472715.1_1_9:19126103-19127487:-|nuORF;ENST00000475923.1_1_9:19126103-19126313:-|nuORF;PLIN2|p.V348*|1|0.15|ENSG00000147872|chr9:19116520-19116520|C/-|frameshift_variant	190.51785368661015	0.00024017880420896124	2				NaN	NaN	0	NaN	8370	3725	12096
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12098	32.851	NaN	85592	30	0	32028	0.106	+			5146	ATSVITIVK	9	87	466.2942482269779	930.5739435207558	2	466.294677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATSVITIVK_	ENSG00000197063|ENST00000357736|MAFG	141.52041321563706	0.009766778904176347	2				NaN	NaN	0	NaN	8371	3725	12096
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12099	32.853	NaN	3334.2	30	0	319.77	0.106	+			8576	EAYNAVVRY	9	64	542.7742289722719	1083.5339050113437	2	542.775146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EAYNAVVRY_	ENSG00000161791|ENST00000335154|FMNL3;ENST00000549137.1_1_12:50039600-50046016:-|nuORF;nc|ENSG00000161791|Q8IVF7-2|FMNL3;nc|ENSG00000161791|Q8IVF7|FMNL3	114.8945686534367	0.024290463251177924	2				NaN	NaN	0	NaN	8372	3725	12096
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12100	32.854	NaN	2871.5	30	0	404.19	0.106			+	34044	RSLVELDEL	9	62	537.2940397792786	1072.573526625357	2	537.2946166992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RSLVELDEL_	REV__ENSG00000136146|ENST00000258648|MED4;REV__ENST00000417167.2_2_13:48667798-48669175:-|nuORF	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	8373	3725	12096
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12101	32.856	NaN	2055	30	0	293.39	0.106	+			35308	SAMKAVTEL	9	59	475.2543138728877	948.4940748125754	2	475.25555419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SAMKAVTEL_	ENSG00000128245|ENST00000248975|YWHAH	58.22992032128504	0.22837015374068087	2				NaN	NaN	0	NaN	8374	3725	12096
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12102	32.858	NaN	3226.8	30	0	245.08	0.032				-1	 	0	50	401.7457521149245	801.4769512966491	2	401.7461242675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8375	3725	12096
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12103	32.859	NaN	3302.6	30	0	666.52	0.139	+			25366	LPGKTYSF	8	63	456.744895728493	911.4752385237861	2	456.7449645996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LPGKTYSF_	ENSG00000102531|ENST00000492622|FNDC3A;FNDC3A|p.R736C|1|0.09|ENSG00000102531|chr13:49191364-49191364|C/T|missense_variant;nc|ENSG00000102531|Q9Y2H6-2|FNDC3A	45.9519527083369	0.6193794311207887	2				NaN	NaN	0	NaN	8376	3725	12096
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12115	32.886	NaN	9018	30	0	1528.6	0.214	+			45327	TVSGIQVRY	9	71	511.78466282547964	1021.5547727177593	2	511.78509521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVSGIQVRY_	ENSG00000129354|ENST00000250244|AP1M2;nc|ENSG00000129354|Q9Y6Q5-2|AP1M2	127.46168284122857	0.016682644177004526	2				NaN	NaN	0	NaN	8385	3728	12114
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12116	32.89	NaN	5720.8	30	0	1146.2	0.106				-1	 	0	69	493.79726309878953	985.5799732643791	2	493.79754638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8386	3728	12114
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12117	32.892	NaN	9832.1	30	0	1046.2	0.106	+			44186	TQWLICVL	8	79	488.27106267625715	974.5275724193143	2	488.2713928222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TQWLICVL_	ENST00000256458.4_1_3:10255026-10264411:+|nuORF;IRAK2|p.N268Mfs*102|1|0.23|ENSG00000134070|chr3:10216943-10216943|C/-|frameshift_variant	51.33545320467046	0.5859736979383976	2				NaN	NaN	0	NaN	8387	3728	12114
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12118	32.894	NaN	6319.6	30	0	1367.1	0.106	+			11080	FETKVTTL	8	65	469.76294492838747	937.511336923575	2	469.76312255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FETKVTTL_	ENSG00000165688|ENST00000371717|PMPCA;ENST00000371720.5_1_9:139305120-139310743:+|nuORF	71.87747018426188	0.391254423828572	2				NaN	NaN	0	NaN	8388	3728	12114
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12119	32.896	NaN	4745.4	30	0	1126.7	0.106			+	28535	NILIGSIAL	9	67	457.2886709935086	912.5627890538173	2	457.2892761230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NILIGSIAL_	REV__ENSG00000214787|ENST00000651255|MS4A4E	40.5726180659479	0.4135428067754104	2				NaN	NaN	0	NaN	8389	3728	12114
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12120	32.897	NaN	4000.8	30	0	729.12	0.033	+			153	AAIEASQSL	9	60	445.23415101715335	888.4537491011067	2	445.2338562011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AAIEASQSL_	ENSG00000168297|ENST00000356151|PXK;nc|ENSG00000168297|Q7Z7A4-2|PXK;nc|ENSG00000168297|Q7Z7A4-4|PXK;nc|ENSG00000168297|Q7Z7A4-6|PXK	93.1432384553994	0.056003526918089595	2				NaN	NaN	0	NaN	8390	3728	12114
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12121	32.898	NaN	1891.4	30	0	524.59	0.139			+	29393	PAPVTIAVK	9	57	448.2847427528559	NaN	0	448.2850036621094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PAPVTIAVK_	REV__ENSG00000165458|ENST00000298229|INPPL1;REV__INPPL1|p.R1156Gfs*46|2|0.42|ENSG00000165458|chr11:72237704-72237704|C/-|frameshift_variant;REV__nc|ENSG00000165458|O15357-2|INPPL1	38.80614096846853	0.28164298475537564	2				NaN	NaN	0	NaN	8391	3728	12114
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12132	32.925	NaN	48997	30	0	6935.2	0.214				-1	 	0	72	453.7550851567892	905.4956173803785	2	453.7556457519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8399	3731	12131
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12133	32.929	NaN	6829.2	30	0	1220.8	0.106	+			49616	VYGVSKETF	9	70	515.2656899154523	1028.5168268977045	2	515.2662963867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYGVSKETF_	ENSG00000164292|ENST00000379982|RHOBTB3;RHOBTB3|p.K539Rfs*53|1|0.25|ENSG00000164292|chr5:95783952-95783952|A/-|frameshift_variant	87.69643885390035	0.07135982304947239	2				NaN	NaN	0	NaN	8400	3731	12131
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12134	32.931	NaN	8482.3	30	0	1320.6	0.106	+			47862	VSLGLAVSK	9	70	437.2733347071734	872.5321164811468	2	437.27374267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSLGLAVSK_	ENSG00000018869|ENST00000586929|ZNF582;ENSG00000197302|ENST00000316491|KRBOX5;ENSG00000197566|ENST00000311331|ZNF624;ENST00000529943.6_1_16:31724760-31765604:+|nuORF;ENST00000534277.5_1_16:31724760-31767037:+|nuORF;ENST00000579983.1_1_17:16534952-16537956:-|nuORF;ZNF624|p.I325Nfs*9|1|0.21|ENSG00000197566|chr17:16623912-16623913|-/T|frameshift_variant;ZNF624|p.I325Sfs*167|1|0.46|ENSG00000197566|chr17:16623913-16623913|T/-|frameshift_variant;ZNF624|p.K498Nfs*74|1|0.49|ENSG00000197566|chr17:16623392-16623392|T/-|frameshift_variant;ZNF624|p.K666Nfs*130|1|0.46|ENSG00000197566|chr17:16622888-16622888|T/-|frameshift_variant;ZNF624|p.K787Ifs*14|1|0.11|ENSG00000197566|chr17:16622526-16622527|-/ATAAATGTAATGAA|frameshift_variant	159.27591364854348	0.004707062175358555	2				NaN	NaN	0	NaN	8401	3731	12131
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12135	32.933	NaN	6981.3	30	0	641.28	0.106	+			10799	FAKGGNLTL	9	75	460.7622614743995	NaN	0	460.7630615234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FAKGGNLTL_	ENSG00000035115|ENST00000356150|SH3YL1;ENST00000497051.5_1_2:233054-249752:-|nuORF;nc|ENSG00000035115|Q96HL8-2|SH3YL1;nc|ENSG00000035115|Q96HL8-3|SH3YL1;nc|ENSG00000035115|Q96HL8-4|SH3YL1	54.776311868738084	0.17377682019723872	2				NaN	NaN	0	NaN	8402	3731	12131
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12136	32.935	NaN	6663.7	30	0	694.54	0.106	+			23417	LACFWSPI	8	70	497.2459091015141	992.4772652698282	2	497.24603271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_LAC(Carbamidomethyl (C))FWSPI_	ENST00000454360.1_1_22:17054334-17055434:+|nuORF	65.89745868150666	0.44339748671293633	2				NaN	NaN	0	NaN	8403	3731	12131
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12137	32.936	NaN	1837.9	30	0	159.25	0.037			+	28146	NALEAHKPKN	10	65	561.3081742139151	1120.60179549463	2	561.3095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NALEAHKPKN_	REV__ENSG00000153107|ENST00000341068|ANAPC1;REV__ENST00000454465.1_1_2:87355723-87398314:+|nuORF;REV__ENST00000485325.1_1_2:112560984-112579093:-|nuORF	36.446750945000026	0.5818864909973037	2				NaN	NaN	0	NaN	8404	3731	12131
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12138	32.937	NaN	2276.8	30	0	245.46	0.14	+			49066	VVKFRWNG	8	63	503.28289794921875	NaN	0	503.28289794921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VVKFRWNG_	ENSG00000124571|ENST00000265351|XPO5;XPO5|p.A377Sfs*6|1|0.38|ENSG00000124571|chr6:43560271-43560272|-/C|frameshift_variant	44.53106598305862	1.7418937515398478	2				NaN	NaN	0	NaN	8405	3731	12131
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12149	32.964	NaN	52035	30	0	5731.5	0.215				-1	 	0	87	464.2603218109207	926.5060906886414	2	464.2606506347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8413	3734	12148
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12150	32.968	NaN	8303.3	30	0	3707.7	0.106				-1	GTMRRKYR	8	46	361.86574173256446	1082.5753957978934	3	361.86602783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_GTM(Oxidation (M))RRKYR_	ENSG00000126070|ENST00000373191|AGO3;nc|ENSG00000126070|Q9H9G7-2|AGO3	30.503639358989545	0.7238069182250283	2				NaN	NaN	0	NaN	8414	3734	12148
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12151	32.97	NaN	6910.4	30	0	1053	0.106				-1	 	0	77	533.7448507791452	1065.4751486250902	2	533.745849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8415	3734	12148
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12152	32.971	NaN	3598.3	30	0	359.51	0.106	+			18953	IVQDEILAH	9	70	519.2849731445312	NaN	0	519.2849731445312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IVQDEILAH_	ENSG00000171453|ENST00000642195|POLR1C;ENST00000481352.6_1_6:43484832-43487644:+|nuORF;nc|ENSG00000171453|O15160-2|POLR1C	76.16968421966216	0.08450868013726211	2				NaN	NaN	0	NaN	8416	3734	12148
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12153	32.973	NaN	14056	30	0	5189.8	0.106			+	-1	TGLFCAARLGL	11	63	393.55117829538824	1177.6317054863648	3	393.552001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_TGLFC(Carbamidomethyl (C))AARLGL_	REV__ENST00000380262.7_1_17:7835519-7835729:+|nuORF	43.650786325866115	0.5079891456189096	2				NaN	NaN	0	NaN	8417	3734	12148
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12154	32.975	NaN	5564.5	30	0	1620.6	0.034	+			45711	VAALLLAAGPG	11	69	476.79450827896096	951.574463624722	2	476.7945861816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VAALLLAAGPG_	ENSG00000141753|ENST00000269593|IGFBP4;IGFBP4|p.V42Wfs*52|2|0.41|ENSG00000141753|chr17:40443852-40443852|C/-|frameshift_variant	50.0245360154114	0.4207767895280948	2				NaN	NaN	0	NaN	8418	3734	12148
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12168	33.003	NaN	37750	30	0	9403.1	0.214				-1	 	0	76	430.7574131802726	859.5002734273452	2	430.7576599121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8429	3737	12167
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12169	33.007	NaN	20533	30	0	2890.4	0.106				-1	 	0	77	499.73353100116253	997.4525090691251	2	499.7337951660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8430	3737	12167
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12170	33.009	NaN	10608	30	0	1781.4	0.106	+			31721	QNVVAFDVY	9	86	527.763178514951	1053.511804096702	2	527.7633666992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QNVVAFDVY_	ENSG00000185915|ENST00000379499|KLHL34	94.00642277110589	0.05356993013874309	2				NaN	NaN	0	NaN	8431	3737	12167
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12171	33.01	NaN	6609.9	30	0	1342.1	0.106			+	18736	ITHLPSAPE	9	69	482.7580119451084	963.5014709570169	2	482.7579040527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ITHLPSAPE_	REV__ENSG00000196220|ENST00000383836|SRGAP3;REV__nc|ENSG00000196220|O43295-2|SRGAP3	63.30626980617807	0.18605348971131092	2				NaN	NaN	0	NaN	8432	3737	12167
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12172	33.012	NaN	3980.4	30	0	322.78	0.106	+			28291	NECGKAFSL	9	68	513.2391713357525	1024.463789738305	2	513.2393188476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_NEC(Carbamidomethyl (C))GKAFSL_	ENSG00000197062|ENST00000421553|ZSCAN26;ENSG00000197782|ENST00000683561|ZNF780A;nc|ENSG00000197062|Q16670-2|ZSCAN26;nc|ENSG00000197062|Q16670|ZSCAN26;nc|ENSG00000197782|O75290-3|ZNF780A	68.62578634547417	0.14673074753754126	2				NaN	NaN	0	NaN	8433	3737	12167
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12173	33.014	NaN	3020.6	30	0	603.19	0.037			+	36621	SGFQQFTGFL	10	50	377.8541843440137	1130.540723632241	3	377.8546142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SGFQQFTGFL_	REV__ENSG00000115464|ENST00000398571|USP34;REV__nc|ENSG00000115464|Q70CQ2-2|USP34;REV__nc|ENSG00000115464|Q70CQ2-3|USP34;REV__USP34|p.L2716Sfs*30|1|0.05|ENSG00000115464|chr2:61214596-61214597|-/AAGCTGA|frameshift_variant;REV__USP34|p.L3228*|1|0.22|ENSG00000115464|chr2:61190564-61190564|A/-|frameshift_variant	33.921630207806714	0.6028135429846169	2				NaN	NaN	0	NaN	8434	3737	12167
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12185	33.04	NaN	37199	30	0	19557	0.214	+			32474	QVMSLGLQK	9	94	502.283026251195	1002.55149956919	2	502.2834777832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QVMSLGLQK_	ENST00000314423.11_1_16:69166475-69170710:+|nuORF;ENST00000562237.5_1_16:69166520-69170710:+|nuORF	141.52041321563706	0.009766778904176347	2				NaN	NaN	0	NaN	8443	3740	12184
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12186	33.043	NaN	16029	30	0	9951.5	0.106	+			17170	HTMEFALVK	9	78	538.2834924103813	1074.5524318875625	2	538.2841186523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HTMEFALVK_	ENSG00000182636|ENST00000649030|NDN	75.04331003522576	0.118981335847003	2				NaN	NaN	0	NaN	8444	3740	12184
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12187	33.045	NaN	6258.1	30	0	1037.7	0.106	+			10756	FAERVTSL	8	70	461.75329234243327	NaN	0	461.7528076171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FAERVTSL_	ENSG00000213145|ENST00000392531|CRIP1	85.16082228582465	1.7418937515398478	2				NaN	NaN	0	NaN	8445	3740	12184
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12188	33.047	NaN	8900	30	0	768.01	0.106	+			34818	RYLEQLHQL	9	64	400.5560028509819	NaN	0	400.5556335449219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RYLEQLHQL_	ENSG00000168610|ENST00000264657|STAT3;nc|ENSG00000168610|P40763-2|STAT3;nc|ENSG00000168610|P40763-3|STAT3;STAT3|p.R729Afs*3|2|0.33|ENSG00000168610|chr17:42316861-42316861|G/-|frameshift_variant	49.44154591367651	0.21054156626303966	2				NaN	NaN	0	NaN	8446	3740	12184
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12189	33.049	NaN	3951.9	30	0	652.09	0.106	+			48614	VTSCFLVEK	9	70	541.7814331054688	NaN	0	541.7814331054688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_VTSC(Carbamidomethyl (C))FLVEK_	ENSG00000166888|ENST00000300134|STAT6;nc|ENSG00000166888|P42226-2|STAT6;nc|ENSG00000166888|P42226-3|STAT6;STAT6|p.G815Efs*27|3|0.31|ENSG00000166888|chr12:57096672-57096672|C/-|frameshift_variant	106.68306549817024	0.012692596758972883	2				NaN	NaN	0	NaN	8447	3740	12184
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12190	33.05	NaN	4748.8	30	0	505.31	0.035	+			21700	KQGTSKKCI	9	73	496.781038179233	NaN	0	496.78076171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KQGTSKKCI_	ENSG00000067066|ENST00000340126|SP100;ENST00000459786.1_1_2:231368968-231371166:+|nuORF;nc|ENSG00000067066|P23497-3|SP100;nc|ENSG00000067066|P23497|SP100	27.882242232435846	0.3367954786602879	2				NaN	NaN	0	NaN	8448	3740	12184
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12191	33.051	NaN	1498	30	0	139.53	0.14			+	-1	TECLCFRL	8	60	521.246826171875	NaN	0	521.246826171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_TECLC(Carbamidomethyl (C))FRL_	REV__ENSG00000131788|ENST00000393045|PIAS3;REV__ENST00000369299.7_1_1:145575401-145580415:+|nuORF;REV__ENST00000498436.2_1_1:145578572-145580415:+|nuORF;REV__PIAS3|p.L222Cfs*56|1|0.24|ENSG00000131788|chr1:145855741-145855741|G/-|frameshift_variant	42.47446043378293	1.7418937515398478	2				NaN	NaN	0	NaN	8449	3740	12184
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12213	33.105	NaN	88657	30	0	20398	0.214				-1	 	0	88	477.25927935408924	952.5040057749785	2	477.2596130371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8465	3746	12212
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12214	33.109	NaN	19749	30	0	5214.4	0.106	+			44830	TTSVITIVK	9	78	481.29978329784444	960.5850136624889	2	481.2998962402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTSVITIVK_	ENSG00000198517|ENST00000343242|MAFK	67.49366992349736	0.1516260258713357	2				NaN	NaN	0	NaN	8466	3746	12212
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12215	33.111	NaN	67273	30	0	14464	0.106				-1	 	0	81	518.2947960116179	1034.5750390900357	2	518.295654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8467	3746	12212
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12216	33.112	NaN	5192.5	30	0	474.56	0.106	+			39562	STGHVGFIFK	10	63	546.7946462130216	1091.574739492843	2	546.7958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STGHVGFIFK_	ENSG00000137575|ENST00000260130|SDCBP;ENST00000523441.1_1_8:59490633-59492419:+|nuORF;nc|ENSG00000137575|O00560-2|SDCBP;nc|ENSG00000137575|O00560-3|SDCBP	85.16082228582465	0.15877915086237185	2				NaN	NaN	0	NaN	8468	3746	12212
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12217	33.114	NaN	15449	30	0	10415	0.036	+			41364	SVMELARLK	9	41	349.53873694569677	1045.5943814372904	3	349.53912353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVMELARLK_	ENSG00000115649|ENST00000360507|CNPPD1	31.529811441608018	0.5085848003137583	2				NaN	NaN	0	NaN	8469	3746	12212
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12229	33.14	NaN	31896	30	0	15515	0.146				-1	 	0	71	388.87132354391935	1163.592141231958	3	388.8716735839844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8478	3749	12228
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12242	33.169	NaN	2803	30	0	365.42	0.214	+			43490	TGPLMCAYK	9	57	492.23762925365276	982.4607055741055	2	492.2384338378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TGPLMCAYK_	ENSG00000110697|ENST00000356404|PITPNM1;nc|ENSG00000110697|O00562-2|PITPNM1;PITPNM1|p.L610Wfs*101|1|0.21|ENSG00000110697|chr11:67497634-67497634|G/-|frameshift_variant	37.15910966729921	0.4535818937225704	2				NaN	NaN	0	NaN	8488	3752	12241
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12243	33.172	NaN	4966.7	30	0	329.35	0.106			+	5684	AVEERIAVY	9	75	525.2848263336821	NaN	0	525.285400390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVEERIAVY_	REV__ABCA2|p.G2110Afs*11|1|0.41|ENSG00000107331|chr9:137010217-137010217|C/-|frameshift_variant;REV__ENSG00000107331|ENST00000341511|ABCA2;REV__ENST00000459850.5_1_9:139905575-139923366:-|nuORF;REV__nc|ENSG00000107331|Q9BZC7-2|ABCA2;REV__nc|ENSG00000107331|Q9BZC7-4|ABCA2;REV__nc|ENSG00000107331|Q9BZC7|ABCA2	54.776311868738084	0.17377682019723872	2				NaN	NaN	0	NaN	8489	3752	12241
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12244	33.174	NaN	2677.6	30	0	485.67	0.106				-1	LGSDLMRK	8	64	468.2535459217499	NaN	0	468.254150390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_LGSDLM(Oxidation (M))RK_	tr|U7SM96|U7SM96_FUSNUProteintranslocasesubunitSecAOS=FusobacteriumnucleatumCTI-5OX=1316586GN=secAPE=3SV=1	40.5726180659479	1.7418937515398478	2				NaN	NaN	0	NaN	8490	3752	12241
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12245	33.176	NaN	5225.6	30	0	943.66	0.106	+			1310	AETATDLVV	9	66	459.742012938658	917.469472944116	2	459.742431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AETATDLVV_	DICER1|p.K1486Nfs*4|1|0.23|ENSG00000100697|chr14:95096462-95096462|T/-|frameshift_variant;DICER1|p.S1473Ffs*4|1|0.2|ENSG00000100697|chr14:95096502-95096503|-/A|frameshift_variant;ENSG00000100697|ENST00000343455|DICER1;ENST00000529206.1_1_14:95595738-95599795:-|nuORF;nc|ENSG00000100697|Q9UPY3-2|DICER1	76.84663266511073	0.11118375776443899	2				NaN	NaN	0	NaN	8491	3752	12241
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12246	33.178	NaN	6435.4	30	0	965.19	0.034	+			4550	ATLDLNAVK	9	69	472.77403945264473	943.5335259720895	2	472.7740478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATLDLNAVK_	ENSG00000083642|ENST00000315596|PDS5B;ENST00000498550.5_1_13:33222909-33262824:+|nuORF;nc|ENSG00000083642|Q9NTI5-2|PDS5B;nc|ENSG00000083642|Q9NTI5-3|PDS5B;PDS5B|p.G721Dfs*35|1|0.13|ENSG00000083642|chr13:32732132-32732132|A/-|frameshift_variant;PDS5B|p.K1268Rfs*8|1|0.07|ENSG00000083642|chr13:32770296-32770296|A/-|frameshift_variant;PDS5B|p.K1287Rfs*22|1|0.26|ENSG00000083642|chr13:32770351-32770351|A/-|frameshift_variant;PDS5B|p.K693Qfs*8|1|0.11|ENSG00000083642|chr13:32710054-32710055|-/T|frameshift_variant;PDS5B|p.N1390Cfs*12|1|0.44|ENSG00000083642|chr13:32770750-32770751|AA/-|frameshift_variant;PDS5B|p.S1198Vfs*10|1|0.28|ENSG00000083642|chr13:32764556-32764556|A/-|frameshift_variant	67.49366992349736	0.1516260258713357	2				NaN	NaN	0	NaN	8492	3752	12241
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12258	33.204	NaN	474570	30	0	88814	0.124	+			44266	TSALPIIQK	9	82	485.79967199447685	969.5847910557537	2	485.80072021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSALPIIQK_	ENSG00000147872|ENST00000276914|PLIN2;ENST00000472715.1_1_9:19126103-19127487:-|nuORF;ENST00000475923.1_1_9:19126103-19126313:-|nuORF;PLIN2|p.V348*|1|0.15|ENSG00000147872|chr9:19116520-19116520|C/-|frameshift_variant	180.92599232761785	0.0012030822705978085	2				NaN	NaN	0	NaN	8501	3755	12257
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12259	33.206	NaN	16049	30	0	3276	0.106	+			11211	FIAPTGHSL	9	69	471.7555417210326	941.4965305088652	2	471.7555236816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FIAPTGHSL_	ENSG00000125354|ENST00000394610|SEPTIN6;ENSG00000138758|ENST00000264893|SEPTIN11;nc|ENSG00000125354|Q14141-3|SEPTIN6;nc|ENSG00000125354|Q14141-4|SEPTIN6;nc|ENSG00000125354|Q14141|SEPTIN6;nc|ENSG00000138758|Q9NVA2-2|SEPTIN11	71.29570347882199	0.13518600952103718	2				NaN	NaN	0	NaN	8502	3755	12257
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12260	33.208	NaN	6469	30	0	1973.5	0.106	+			8290	EAIKILKGEY	10	78	582.3368588668927	1162.6591648005854	2	582.3370971679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EAIKILKGEY_	ENSG00000079785|ENST00000233084|DDX1;ENST00000470674.1_1_2:15763561-15768670:+|nuORF;nc|ENSG00000079785|Q92499-2|DDX1;nc|ENSG00000079785|Q92499-3|DDX1	160.9127304478731	0.006557902026845906	2				NaN	NaN	0	NaN	8503	3755	12257
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12261	33.21	NaN	2507.5	30	0	342.5	0.106	+			50360	WVPGVGMEIR	10	66	572.3034145489921	1142.5922761647842	2	572.3040771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_WVPGVGMEIR_	ENST00000588321.1_1_19:11453493-11456176:-|nuORF	53.08895987439943	0.42869529153390606	2				NaN	NaN	0	NaN	8504	3755	12257
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12262	33.212	NaN	3104.1	30	0	1965.8	0.106	+			13498	GLLYIAKKN	9	33	340.54614830609984	1018.6166155184995	3	340.54644775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GLLYIAKKN_	ENSG00000066185|ENST00000372565|ZMYND12	13.775330524044264	0.6112419832031292	2				NaN	NaN	0	NaN	8505	3755	12257
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12263	33.213	NaN	3212.3	30	0	407.6	0.106	+			46174	VDVSAPKL	8	54	414.74434017349716	827.4741274137943	2	414.74468994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VDVSAPKL_	AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK	60.11826168202944	0.5006107059937851	2				NaN	NaN	0	NaN	8506	3755	12257
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12264	33.215	NaN	6261	30	0	348.74	0.038	+			19910	KEFDGKSLVSV	11	80	604.8297031552866	1207.644853377373	2	604.829833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KEFDGKSLVSV_	ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;ENST00000517330.1_1_5:77337712-77337985:-|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P;nc|ENSG00000205940|Q58FF8|HSP90AB2P	136.5150327860613	0.0007853163747694189	2				NaN	NaN	0	NaN	8507	3755	12257
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12275	33.241	NaN	21379	30	0	5585.4	0.214	+			46460	VETAKVYQL	9	79	525.7945454850337	1049.5745380368674	2	525.795654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VETAKVYQL_	ENSG00000137815|ENST00000389629|RTF1;RTF1|p.D528Ifs*12|1|0.29|ENSG00000137815|chr15:41477182-41477182|G/-|frameshift_variant	101.25262130126117	0.03792372629710479	2				NaN	NaN	0	NaN	8515	3758	12274
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12276	33.245	NaN	16826	30	0	1936.4	0.106	+			36523	SFEDAKEAL	9	87	505.24513433004176	1008.4757157268835	2	505.2453308105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SFEDAKEAL_	ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232319904-232323320:-|nuORF	129.42129120953632	0.01549634589885217	2				NaN	NaN	0	NaN	8516	3758	12274
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12277	33.247	NaN	2859.1	30	0	586.07	0.106	+			17231	HVLEAQDLIAK	11	70	618.8511755232793	1235.6877981133584	2	618.8514404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HVLEAQDLIAK_	ENSG00000139641|ENST00000394048|ESYT1;nc|ENSG00000139641|Q9BSJ8-2|ESYT1	123.11161354013207	0.014199556112152378	2				NaN	NaN	0	NaN	8517	3758	12274
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12278	33.248	NaN	4967.4	30	0	700.03	0.106	+			41230	SVLEVVSEK	9	66	495.2810371440547	NaN	0	495.27923583984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVLEVVSEK_	ENSG00000125885|ENST00000610722|MCM8;nc|ENSG00000125885|Q9UJA3-2|MCM8;nc|ENSG00000125885|Q9UJA3-3|MCM8;nc|ENSG00000125885|Q9UJA3-4|MCM8	75.04331003522576	0.0883683072398826	2				NaN	NaN	0	NaN	8518	3758	12274
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12279	33.25	NaN	3408.9	30	0	461.54	0.106	+			28877	NQCQTQLK	8	65	481.74217704379146	NaN	0	481.741943359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NQCQTQLK_	ENSG00000167615|ENST00000326764|LENG8;nc|ENSG00000167615|Q96PV6-1|LENG8	52.29916861842294	1.7418937515398478	2				NaN	NaN	0	NaN	8519	3758	12274
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12280	33.252	NaN	3486.7	30	0	695.32	0.036	+			28837	NPSGNLTETY	10	64	548.2507321274961	1094.4869113217921	2	548.2516479492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NPSGNLTETY_	ENSG00000196924|ENST00000369850|FLNA;FLNA|p.G2237Efs*109|1|0.28|ENSG00000196924|chrX:154352240-154352240|C/-|frameshift_variant;FLNA|p.Q1716Sfs*23|2|0.38|ENSG00000196924|chrX:154354896-154354896|G/-|frameshift_variant;FLNA|p.R2520Vfs*16|1|0.7|ENSG00000196924|chrX:154349560-154349560|G/-|frameshift_variant;nc|ENSG00000196924|P21333-2|FLNA	83.6470233535746	0.16744595502813267	2				NaN	NaN	0	NaN	8520	3758	12274
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12281	33.253	NaN	2807.7	30	0	361.05	0.14			+	36114	SEKNFNEI	8	69	490.7383821804416	979.4622114276832	2	490.7376708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SEKNFNEI_	REV__ENSG00000187753|ENST00000339137|C9orf153;REV__nc|nan|Q5TBE3|C9orf153	71.87747018426188	0.391254423828572	2				NaN	NaN	0	NaN	8521	3758	12274
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12294	33.282	NaN	3419.5	30	0	530.68	0.214	+			5705	AVFEETLEK	9	65	533.2762183252855	1064.537883717371	2	533.2771606445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVFEETLEK_	ENSG00000171204|ENST00000358867|TMEM126B;nc|ENSG00000171204|Q8IUX1-2|TMEM126B;nc|ENSG00000171204|Q8IUX1-5|TMEM126B	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	8531	3761	12293
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12295	33.286	NaN	4044.4	30	0	626.62	0.106				-1	 	0	73	453.7550851567892	905.4956173803785	2	453.7553405761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8532	3761	12293
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12296	33.287	NaN	3802	30	0	442.34	0.106	+			36111	SEKLVSVM	8	61	446.7434452875208	891.4723376418416	2	446.7438659667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEKLVSVM_	ENSG00000136811|ENST00000351030|ODF2;nc|ENSG00000136811|Q5BJF6-10|ODF2;nc|ENSG00000136811|Q5BJF6-2|ODF2;nc|ENSG00000136811|Q5BJF6-3|ODF2;nc|ENSG00000136811|Q5BJF6-4|ODF2;nc|ENSG00000136811|Q5BJF6-5|ODF2;nc|ENSG00000136811|Q5BJF6-6|ODF2;nc|ENSG00000136811|Q5BJF6-7|ODF2;nc|ENSG00000136811|Q5BJF6-8|ODF2;nc|ENSG00000136811|Q5BJF6|ODF2	60.97194046774394	0.49215940876911696	2				NaN	NaN	0	NaN	8533	3761	12293
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12297	33.289	NaN	2218.2	30	0	262.53	0.106	+			27093	MANADLVKY	9	64	512.7609082134821	NaN	0	512.7609252929688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MANADLVKY_	ENSG00000145868|ENST00000340253|FBXO38;FBXO38|p.N697Kfs*44|1|0.3|ENSG00000145868|chr5:148427376-148427377|-/A|frameshift_variant;FBXO38|p.N697Tfs*32|1|0.21|ENSG00000145868|chr5:148427377-148427377|A/-|frameshift_variant;FBXO38|p.S849Afs*20|1|0.38|ENSG00000145868|chr5:148427834-148427834|G/-|frameshift_variant;nc|ENSG00000145868|Q6PIJ6-2|FBXO38;nc|ENSG00000145868|Q6PIJ6-3|FBXO38	69.6276240434122	0.10825701912424071	2				NaN	NaN	0	NaN	8534	3761	12293
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12298	33.291	NaN	4038.5	30	0	898.73	0.106	+			43753	TLFGRDLL	8	59	467.77115602606807	933.5277591189362	2	467.7713928222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TLFGRDLL_	ENSG00000164111|ENST00000296511|ANXA5;ENST00000513428.5_1_4:122602814-122617744:-|nuORF	42.396135135203025	0.6414440140393314	2				NaN	NaN	0	NaN	8535	3761	12293
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12299	33.293	NaN	3621.4	30	0	303.82	0.034			+	8039	DTVMPCGIL	9	64	482.72971911187085	NaN	0	482.7295227050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_DTVM(Oxidation (M))PCGIL_	REV__ENSG00000277791|ENST00000619426|PSMB3	65.80317337860623	0.12456833308499304	2				NaN	NaN	0	NaN	8536	3761	12293
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12300	33.293	NaN	2124.3	30	0	191.05	0.138	+			47863	VSLGLAVSK	9	55	437.2736643429997	872.5327757527995	2	437.2735595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VSLGLAVSK_	ENSG00000018869|ENST00000586929|ZNF582;ENSG00000197302|ENST00000316491|KRBOX5;ENSG00000197566|ENST00000311331|ZNF624;ENST00000529943.6_1_16:31724760-31765604:+|nuORF;ENST00000534277.5_1_16:31724760-31767037:+|nuORF;ENST00000579983.1_1_17:16534952-16537956:-|nuORF;ZNF624|p.I325Nfs*9|1|0.21|ENSG00000197566|chr17:16623912-16623913|-/T|frameshift_variant;ZNF624|p.I325Sfs*167|1|0.46|ENSG00000197566|chr17:16623913-16623913|T/-|frameshift_variant;ZNF624|p.K498Nfs*74|1|0.49|ENSG00000197566|chr17:16623392-16623392|T/-|frameshift_variant;ZNF624|p.K666Nfs*130|1|0.46|ENSG00000197566|chr17:16622888-16622888|T/-|frameshift_variant;ZNF624|p.K787Ifs*14|1|0.11|ENSG00000197566|chr17:16622526-16622527|-/ATAAATGTAATGAA|frameshift_variant	40.05817265558897	0.419577045485086	2				NaN	NaN	0	NaN	8537	3761	12293
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12311	33.321	NaN	20281	30	0	12594	0.214	+			35503	SATTSPFFK	9	75	493.25302528719806	984.4914976411961	2	493.25323486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SATTSPFFK_	ENSG00000133961|ENST00000555238|NUMB;nc|ENSG00000133961|P49757-2|NUMB;nc|ENSG00000133961|P49757-3|NUMB;nc|ENSG00000133961|P49757-4|NUMB;nc|ENSG00000133961|P49757-5|NUMB;nc|ENSG00000133961|P49757-6|NUMB;nc|ENSG00000133961|P49757-7|NUMB;nc|ENSG00000133961|P49757-8|NUMB;nc|ENSG00000133961|P49757-9|NUMB	75.04331003522576	0.118981335847003	2				NaN	NaN	0	NaN	8545	3764	12310
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12312	33.324	NaN	7228.1	30	0	721.18	0.106	+			41460	SVNNSIFYR	9	81	550.2794318309436	1098.5443107286872	2	550.2806396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVNNSIFYR_	DHX16|p.I1033*|5|0.32|ENSG00000204560|chr6:30653271-30653271|T/-|frameshift_variant;DHX16|p.R868Lfs*15|1|0.04|ENSG00000204560|chr6:30655493-30655493|C/-|frameshift_variant;ENSG00000204560|ENST00000376442|DHX16	106.68306549817024	0.032382560583716295	2				NaN	NaN	0	NaN	8546	3764	12310
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12313	33.326	NaN	5741.3	30	0	666.75	0.106	+			36472	SEVSKIVTV	9	71	481.2813398364234	960.5481267396468	2	481.2818603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEVSKIVTV_	ENSG00000163535|ENST00000357799|SGO2;nc|ENSG00000163535|Q562F6-2|SGO2	104.01359247289065	0.03510646158778409	2				NaN	NaN	0	NaN	8547	3764	12310
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12314	33.328	NaN	3810.1	30	0	481.86	0.106	+			24689	LHAPLPQGD	9	65	474.2507951622301	946.4870373912602	2	474.2513122558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LHAPLPQGD_	ENSG00000154803|ENST00000285071|FLCN;ENST00000389171.4_1_17:17129294-17135185:-|nuORF;FLCN|p.H429Pfs*27|1|0.31|ENSG00000154803|chr17:17216394-17216395|-/G|frameshift_variant;FLCN|p.H429Tfs*39|2|0.24|ENSG00000154803|chr17:17216395-17216395|G/-|frameshift_variant;nc|ENSG00000154803|Q8NFG4-2|FLCN;nc|ENSG00000154803|Q8NFG4-3|FLCN	55.50420428727701	0.2510918378945873	2				NaN	NaN	0	NaN	8548	3764	12310
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12315	33.33	NaN	5383.4	30	0	1460.4	0.106				-1	QRHCLAQACL	10	53	400.52927278347624	NaN	0	400.8636474609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_QRHC(Carbamidomethyl (C))LAQACL_	RBM15B|p.S844Vfs*121|1|0.35|ENSG00000259956|chr3:51393921-51393922|-/G|frameshift_variant	36.446750945000026	0.3805027428805705	2				NaN	NaN	0	NaN	8549	3764	12310
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12316	33.331	NaN	2424	30	0	338.83	0.036	+			39412	STDPVAASIMK	11	62	560.2886551200041	1118.5627573068082	2	560.2899780273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STDPVAASIMK_	ENSG00000167671|ENST00000301281|UBXN6;ENST00000588238.1_1_19:4448313-4448511:-|nuORF;ENST00000592358.1_1_19:4448313-4452408:-|nuORF;nc|ENSG00000167671|Q9BZV1-2|UBXN6	65.15724298150197	0.2774196309614691	2				NaN	NaN	0	NaN	8550	3764	12310
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12317	33.332	NaN	2781.7	30	0	756.95	0.146	+			4629	ATLPDLKTMEK	11	48	416.2281349579064	1245.662575473919	3	416.228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATLPDLKTMEK_	ENSG00000129566|ENST00000262715|TEP1;nc|ENSG00000129566|Q99973-2|TEP1;TEP1|p.K1597Sfs*14|1|0.27|ENSG00000129566|chr14:20380448-20380448|T/-|frameshift_variant;TEP1|p.L888Wfs*31|1|0.45|ENSG00000129566|chr14:20387928-20387928|G/-|frameshift_variant;TEP1|p.N507Efs*11|1|0.29|ENSG00000129566|chr14:20401014-20401015|-/C|frameshift_variant;TEP1|p.R392Afs*22|1|0.27|ENSG00000129566|chr14:20403743-20403743|G/-|frameshift_variant;TEP1|p.V1856Lfs*45|3|0.41|ENSG00000129566|chr14:20378179-20378179|C/-|frameshift_variant	36.31764250033197	0.6083289427130232	2				NaN	NaN	0	NaN	8551	3764	12310
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12330	33.361	NaN	13556	30	0	2018.7	0.214	+			36842	SIFGGAKPV	9	64	438.25267373747744	874.4907945417549	2	438.2525634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIFGGAKPV_	ENSG00000063046|ENST00000262056|EIF4B;ENST00000432132.2_1_9:98909238-98910135:+|nuORF;ENST00000432307.1_1_X:110862947-110863739:-|nuORF;nc|ENSG00000063046|P23588-2|EIF4B	82.24051045832904	0.08786059719216216	2				NaN	NaN	0	NaN	8561	3767	12329
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12331	33.365	NaN	7364.4	30	0	1178.6	0.106	+			44634	TTFSSAFCR	9	76	538.745427245402	1075.4763015576038	2	538.7454833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_TTFSSAFC(Carbamidomethyl (C))R_	ENSG00000164151|ENST00000296564|ICE1;ICE1|p.D1105Rfs*4|1|0.21|ENSG00000164151|chr5:5462639-5462640|-/G|frameshift_variant;ICE1|p.G1104Efs*6|1|0.34|ENSG00000164151|chr5:5462640-5462640|G/-|frameshift_variant;ICE1|p.H1965Afs*55|1|0.29|ENSG00000164151|chr5:5465219-5465220|-/A|frameshift_variant	44.377184641726394	0.36891676396732553	2				NaN	NaN	0	NaN	8562	3767	12329
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12332	33.367	NaN	2913.9	30	0	341.61	0.106	+			17371	IALVHTDSY	9	62	509.76330817147834	1017.5120634097567	2	509.763427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IALVHTDSY_	ENSG00000198961|ENST00000361189|PJA2;nc|ENSG00000198961|O43164-2|PJA2;PJA2|p.D450Rfs*6|1|0.16|ENSG00000198961|chr5:109368682-109368683|-/T|frameshift_variant	77.31757898189308	0.1091473830098891	2				NaN	NaN	0	NaN	8563	3767	12329
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12333	33.369	NaN	2916.4	30	0	277.45	0.106				-1	VLMLIMVY	8	67	507.2742501334462	NaN	0	507.274169921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Oxidation (M)	_VLM(Oxidation (M))LIM(Oxidation (M))VY_	ENSG00000112195|ENST00000483722|TREML2	43.626045697637714	1.7418937515398478	2				NaN	NaN	0	NaN	8564	3767	12329
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12334	33.371	NaN	4092.8	30	0	1384.8	0.106			+	25982	LSKAIVPGV	9	52	442.2839537403346	882.5533545474692	2	442.2840576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSKAIVPGV_	REV__ENSG00000119899|ENST00000355773|SLC17A5	37.15910966729921	0.4535818937225704	2				NaN	NaN	0	NaN	8565	3767	12329
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12335	33.372	NaN	2336.4	30	0	345.34	0.033	+			16607	HGPGEALAL	9	52	432.73121278948844	863.4478726457769	2	432.73095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HGPGEALAL_	ENSG00000277150|ENST00000622749|F8A3	57.81127852772723	0.2318599694398087	2				NaN	NaN	0	NaN	8566	3767	12329
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12336	33.373	NaN	1750.2	30	0	222.49	0.14	+			38583	SSFVAPLEK	9	60	489.26885986328125	NaN	0	489.26885986328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSFVAPLEK_	ENSG00000132386|ENST00000254722|SERPINF1;ENST00000573763.1_1_17:1675146-1678370:+|nuORF	36.31764250033197	0.294206896222586	2				NaN	NaN	0	NaN	8567	3767	12329
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12348	33.4	NaN	20789	30	0	4848.4	0.214	+			30660	QAVILDQKY	9	78	539.3004392402665	1076.586325547333	2	539.3013916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QAVILDQKY_	ENSG00000127831|ENST00000248444|VIL1	146.78539889680295	0.007618400906539062	2				NaN	NaN	0	NaN	8576	3770	12347
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12349	33.404	NaN	2568.4	30	0	364.41	0.106	+			42007	SVYLERLK	8	66	504.2977083055782	NaN	0	504.29815673828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVYLERLK_	CKAP5|p.V1971Lfs*42|1|0.03|ENSG00000175216|chr11:46744211-46744212|-/TTGAAAAAAAG|frameshift_variant;ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5	56.72105179125745	1.7418937515398478	2				NaN	NaN	0	NaN	8577	3770	12347
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12350	33.406	NaN	2020.6	30	0	196.34	0.106			+	46104	VDEHRLRA	8	62	498.2742416944007	NaN	0	498.2740783691406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VDEHRLRA_	REV__ENSG00000159069|ENST00000325285|FBXW5;REV__ENST00000459905.5_1_9:139835382-139837220:-|nuORF;REV__ENST00000483559.5_1_9:139835382-139837095:-|nuORF	38.80614096846853	1.7418937515398478	2				NaN	NaN	0	NaN	8578	3770	12347
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12351	33.407	NaN	2941.9	30	0	387.73	0.106			+	24660	LGVATIIADG	10	65	465.26836938213734	928.5221858310747	2	465.2682189941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LGVATIIADG_	REV__ENSG00000164007|ENST00000296387|CLDN19;REV__nc|ENSG00000164007|Q8N6F1-2|CLDN19;REV__nc|ENSG00000164007|Q8N6F1-3|CLDN19	56.72105179125745	0.3956618550748046	2				NaN	NaN	0	NaN	8579	3770	12347
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12352	33.409	NaN	1881.2	30	0	145.91	0.106			+	16355	HELVVRNYI	9	64	571.8205063722178	NaN	0	572.3048095703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HELVVRNYI_	REV__ENSG00000181789|ENST00000314797|COPG1;REV__ENST00000513410.1_1_3:128982773-128985943:+|nuORF	35.61828744233558	0.29773779453147337	2				NaN	NaN	0	NaN	8580	3770	12347
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12353	33.411	NaN	2162.2	30	0	201.8	0.036				-1	IYLCWVKC	8	70	542.7688031235571	1083.523053313914	2	542.7695922851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_IYLC(Carbamidomethyl (C))WVKC_	ENST00000561366.1_1_15:78458527-78458704:+|nuORF	29.841539824830324	0.7289191502596711	2				NaN	NaN	0	NaN	8581	3770	12347
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12364	33.436	NaN	18706	30	0	4922.6	0.214	+			36731	SGVSLAALK	9	71	423.25776331095506	844.5009736887101	2	423.2583312988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SGVSLAALK_	ENSG00000124575|ENST00000244534|H1-3;ENSG00000168298|ENST00000304218|H1-4;ENSG00000187837|ENST00000343677|H1-2	132.757866228626	0.013877640931359021	2				NaN	NaN	0	NaN	8589	3773	12363
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12365	33.44	NaN	25732	30	0	6619.2	0.106	+			7627	DKIFYLFLTQE	11	69	472.9206743430662	NaN	0	472.92095947265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DKIFYLFLTQE_	ENSG00000114520|ENST00000251775|SNX4;ENST00000471751.5_1_3:125166625-125239024:-|nuORF;ENST00000473417.5_1_3:125188296-125239016:-|nuORF;nc|ENSG00000114520|O95219-2|SNX4	21.780426970141523	0.456735970842152	2				NaN	NaN	0	NaN	8590	3773	12363
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12366	33.442	NaN	9340	30	0	1657.8	0.106	+			38498	SSATTSPFFK	10	74	536.7687821332036	1071.523011333207	2	536.770263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSATTSPFFK_	ENSG00000133961|ENST00000555238|NUMB;nc|ENSG00000133961|P49757-2|NUMB;nc|ENSG00000133961|P49757-3|NUMB;nc|ENSG00000133961|P49757-4|NUMB;nc|ENSG00000133961|P49757-5|NUMB;nc|ENSG00000133961|P49757-6|NUMB;nc|ENSG00000133961|P49757-7|NUMB;nc|ENSG00000133961|P49757-8|NUMB;nc|ENSG00000133961|P49757-9|NUMB	106.68306549817024	0.05784995512091477	2				NaN	NaN	0	NaN	8591	3773	12363
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12367	33.444	NaN	3654.6	30	0	420.54	0.106				-1	 	0	69	477.25927935408924	952.5040057749785	2	477.2596130371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8592	3773	12363
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12368	33.445	NaN	11518	30	0	3706.3	0.106	+			15306	GTVDVTPFIKK	11	70	402.2357365671612	1203.6853803016836	3	402.5707702636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTVDVTPFIKK_	ENSG00000198408|ENST00000361464|OGA;nc|ENSG00000198408|O60502-2|OGA;nc|ENSG00000198408|O60502-4|OGA	38.714083909724	0.5755383074156426	2				NaN	NaN	0	NaN	8593	3773	12363
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12369	33.447	NaN	3028.5	30	0	625.12	0.038	+			34757	RYFDPANGKF	10	58	607.8014463229116	1213.588339712623	2	607.8020629882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RYFDPANGKF_	ENSG00000167658|ENST00000309311|EEF2;ENST00000598182.5_1_19:3980752-3982305:-|nuORF	45.02220120713402	0.5028680121232791	2				NaN	NaN	0	NaN	8594	3773	12363
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12370	33.448	NaN	1464.7	30	0	331.19	0.14			+	45738	VADPVVAR	8	54	413.7424607678737	825.4703686025474	2	413.74249267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VADPVVAR_	REV__ATP1A1|p.A598V|1|0.17|ENSG00000163399|chr1:116395242-116395242|C/T|missense_variant	30.503639358989545	0.7238069182250283	2				NaN	NaN	0	NaN	8595	3773	12363
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12384	33.48	NaN	22843	30	0	8821	0.214	+			31858	QPVKSFPTM	9	74	517.7702815467536	1033.5260101603071	2	517.771240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QPVKSFPTM_	ENSG00000164944|ENST00000297591|VIRMA;nc|ENSG00000164944|Q69YN4-2|VIRMA;nc|ENSG00000164944|Q69YN4-3|VIRMA;nc|ENSG00000164944|Q69YN4-4|VIRMA	35.61828744233558	0.47037581924408073	2				NaN	NaN	0	NaN	8606	3776	12383
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12385	33.483	NaN	6908.5	30	0	1027.5	0.106	+			47133	VLPPQPTLPPQ	11	65	396.23234396082364	1185.675202482671	3	396.2328186035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VLPPQPTLPPQ_	ENSG00000165238|ENST00000427277|WNK2;nc|ENSG00000165238|Q9Y3S1-2|WNK2;nc|ENSG00000165238|Q9Y3S1-4|WNK2;nc|ENSG00000165238|Q9Y3S1|WNK2;WNK2|p.S1424Pfs*5|1|0.34|ENSG00000165238|chr9:93288908-93288908|C/-|frameshift_variant;WNK2|p.T1980Lfs*12|2|0.16|ENSG00000165238|chr9:93297965-93297965|C/-|frameshift_variant	58.62960593111931	0.3356877741313683	2				NaN	NaN	0	NaN	8607	3776	12383
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12386	33.485	NaN	3954.4	30	0	603.02	0.106	+			8814	EELEKSIAV	9	69	509.27720638547447	NaN	0	509.277099609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EELEKSIAV_	ENSG00000134602|ENST00000394334|STK26;nc|ENSG00000134602|Q9P289-2|STK26;nc|ENSG00000134602|Q9P289-3|STK26	45.9519527083369	0.2345902329052062	2				NaN	NaN	0	NaN	8608	3776	12383
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12387	33.487	NaN	4994.2	30	0	572.68	0.106	+			9313	EIDKKTFL	8	67	497.2839438664907	992.5533347997814	2	497.28436279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EIDKKTFL_	tr|U7SUH3|U7SUH3_FUSNULipoproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01420PE=4SV=1	45.9519527083369	0.6193794311207887	2				NaN	NaN	0	NaN	8609	3776	12383
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12388	33.489	NaN	9030.7	30	0	1749.3	0.106				-1	 	0	67	459.28641169755883	916.5582704619177	2	459.2869567871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8610	3776	12383
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12389	33.491	NaN	3041.3	30	0	329.42	0.035	+			36497	SEYGKAAVAF	10	69	521.7638797378655	NaN	0	521.7647094726562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SEYGKAAVAF_	ENSG00000134265|ENST00000322897|NAPG;ENST00000580746.1_1_18:10526126-10532820:+|nuORF;ENST00000582978.5_1_18:10526099-10540502:+|nuORF;NAPG|p.N182Kfs*4|1|0.28|ENSG00000134265|chr18:10546357-10546358|-/A|frameshift_variant	51.19269402634007	0.2980620950593832	2				NaN	NaN	0	NaN	8611	3776	12383
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12390	33.491	NaN	5803.7	30	0	1087.8	0.14	+			11604	FPSSNVHVY	9	64	525.2561487966672	1048.4977446601342	2	525.2578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FPSSNVHVY_	ENSG00000148719|ENST00000444643|DNAJB12;nc|ENSG00000148719|Q9NXW2-2|DNAJB12	50.0245360154114	0.3026755932229825	2				NaN	NaN	0	NaN	8612	3776	12383
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12402	33.518	NaN	52258	30	0	16047	0.214				-1	 	0	72	453.2575946989931	904.5006364647862	2	453.2579345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8621	3779	12401
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12403	33.522	NaN	3741.4	30	0	594.86	0.106			+	1662	AGQAKYVY	8	61	450.2342003549151	898.4538477766303	2	450.2344665527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AGQAKYVY_	REV__ENSG00000179889|ENST00000396410|PDXDC1;REV__nc|ENSG00000179889|Q6P996-3|PDXDC1;REV__nc|ENSG00000179889|Q6P996-4|PDXDC1;REV__nc|ENSG00000179889|Q6P996-5|PDXDC1;REV__PDXDC1|p.P706Tfs*3|1|0.06|ENSG00000179889|chr16:15036023-15036024|-/A|frameshift_variant	29.841539824830324	0.7289191502596711	2				NaN	NaN	0	NaN	8622	3779	12401
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12404	33.524	NaN	4364.2	30	0	556.81	0.106	+			45138	TVLENSTSY	9	69	507.2426399361462	1012.4707269390924	2	507.24298095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVLENSTSY_	ASAH1|p.W314Cfs*28|1|0.11|ENSG00000104763|chr8:18059440-18059440|C/-|frameshift_variant;ENSG00000104763|ENST00000637790|ASAH1;nc|ENSG00000104763|Q13510-2|ASAH1;nc|ENSG00000104763|Q13510-3|ASAH1	112.2953585152457	0.026655838328212944	2				NaN	NaN	0	NaN	8623	3779	12401
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12405	33.526	NaN	5797.9	30	0	892.72	0.106			+	35369	SAPRSFSPSL	10	66	524.7740229846702	1047.5334930361403	2	524.77490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SAPRSFSPSL_	REV__ENSG00000103550|ENST00000219837|KNOP1	37.81151784470057	0.569310847604193	2				NaN	NaN	0	NaN	8624	3779	12401
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12406	33.528	NaN	3614.4	30	0	536.44	0.106			+	19014	IWDEQFSSV	9	71	555.7596354973491	1109.5047180614981	2	555.7606811523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IWDEQFSSV_	REV__chr19:41727352-41769320|187|11.17|0.17|6.01|+|1|TE_info:MER65-int,MER65-int_dup834,ERV1,LTR,acceptor,+,41769320,41770124|CEACAM5,None|1	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	8625	3779	12401
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12407	33.529	NaN	4412.7	30	0	265.64	0.035	+			28912	NQSREVEM	8	75	496.7285287962637	991.4425046593274	2	496.72869873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NQSREVEM_	ENSG00000161640|ENST00000447370|SIGLEC11;nc|ENSG00000161640|Q96RL6-2|SIGLEC11;SIGLEC11|p.S508Afs*11|1|0.32|ENSG00000161640|chr19:49958413-49958413|G/-|frameshift_variant	51.33545320467046	0.5859736979383976	2				NaN	NaN	0	NaN	8626	3779	12401
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12408	33.53	NaN	1458.4	30	0	157.52	0.142	+			39496	STFNNDILSK	10	55	569.7900801158105	1137.565607298421	2	569.7907104492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STFNNDILSK_	ENSG00000111912|ENST00000392477|NCOA7;nc|ENSG00000111912|Q8NI08-2|NCOA7;nc|ENSG00000111912|Q8NI08-5|NCOA7;nc|ENSG00000111912|Q8NI08-7|NCOA7	50.79123845855914	0.44970922346023856	2				NaN	NaN	0	NaN	8627	3779	12401
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12422	33.562	NaN	11838	30	0	1603.1	0.214	+			44267	TSALPIIQK	9	80	485.79967199447685	969.5847910557537	2	485.79901123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSALPIIQK_	ENSG00000147872|ENST00000276914|PLIN2;ENST00000472715.1_1_9:19126103-19127487:-|nuORF;ENST00000475923.1_1_9:19126103-19126313:-|nuORF;PLIN2|p.V348*|1|0.15|ENSG00000147872|chr9:19116520-19116520|C/-|frameshift_variant	79.71258880314673	0.09879134589249085	2				NaN	NaN	0	NaN	8638	3782	12421
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12423	33.565	NaN	2590.3	30	0	564.48	0.106	+			20442	KEVDILRM	8	61	502.2834120900002	1002.5522712468004	2	502.2839660644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEVDILRM_	ENSG00000151065|ENST00000280665|DCP1B;ENST00000537725.1_1_12:2070525-2113588:-|nuORF;ENST00000543381.5_1_12:2055374-2100299:-|nuORF;nc|ENSG00000151065|Q8IZD4-2|DCP1B	74.25504064058377	0.37144338840759816	2				NaN	NaN	0	NaN	8639	3782	12421
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12424	33.567	NaN	8882.4	30	0	3593.4	0.106	+			32435	QVIGVVLQK	9	73	492.31542440767373	982.6162958821475	2	492.3163757324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QVIGVVLQK_	ENST00000297857.3_1_8:124268339-124279533:-|nuORF	71.29570347882199	0.13518600952103718	2				NaN	NaN	0	NaN	8640	3782	12421
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12425	33.569	NaN	3384.7	30	0	819.45	0.106	+			42847	TEFHELEKI	9	74	573.2947041539634	1144.5748553747267	2	573.295654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TEFHELEKI_	ENSG00000166483|ENST00000450114|WEE1;ENST00000524549.1_1_11:9597437-9598815:+|nuORF;nc|ENSG00000166483|P30291-2|WEE1	51.19269402634007	0.2889735674168909	2				NaN	NaN	0	NaN	8641	3782	12421
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12426	33.571	NaN	5116.3	30	0	1710.6	0.106			+	10721	FADIEEQTY	9	72	558.2483237338546	1114.482094534509	2	558.2492065429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FADIEEQTY_	REV__ENSG00000172172|ENST00000306185|MRPL13	37.81151784470057	0.4459294069877048	2				NaN	NaN	0	NaN	8642	3782	12421
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12427	33.573	NaN	1634.3	30	0	158.98	0.036	+			17695	IELLNETSF	9	62	533.2762183252855	1064.537883717371	2	532.7725219726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IELLNETSF_	ENSG00000151838|ENST00000537690|CCDC175	40.77816245573522	0.41113185337114944	2				NaN	NaN	0	NaN	8643	3782	12421
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12428	33.573	NaN	2007.7	30	0	271.82	0.141	+			25488	LPSELERSY	9	65	547.2790770816581	1092.543601230116	2	547.2805786132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LPSELERSY_	ENSG00000055130|ENST00000325222|CUL1	43.650786325866115	0.37743712540499297	2				NaN	NaN	0	NaN	8644	3782	12421
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12441	33.602	NaN	65300	30	0	7325.5	0.214				-1	MMKYWANF	8	96	553.7440103412496	1105.473467749299	2	553.7451782226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))MKYWANF_	ENSG00000172824|ENST00000648724|CES4A;ENSG00000172831|ENST00000317091|CES2;ENST00000535543.5_1_16:67034893-67043042:+|nuORF;ENST00000543561.1_1_16:67040205-67043042:+|nuORF;ENST00000544478.1_1_16:67040601-67043042:+|nuORF;ENST00000566869.1_1_16:66976624-66994653:+|nuORF;ENST00000568347.1_1_16:66976525-66977275:+|nuORF;ENST00000568470.5_1_16:66969809-66977925:+|nuORF;nc|ENSG00000172824|Q5XG92-2|CES4A;nc|ENSG00000172824|Q5XG92-4|CES4A;nc|ENSG00000172824|Q5XG92-6|CES4A;nc|ENSG00000172831|O00748-2|CES2;nc|ENSG00000172831|O00748-4|CES2;nc|ENSG00000172831|O00748-5|CES2	86.93460362436232	0.2867499496721195	2				NaN	NaN	0	NaN	8654	3785	12440
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12442	33.606	NaN	17358	30	0	3682.5	0.106				-1	 	0	74	519.7764422325027	1037.5383315318054	2	519.777099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8655	3785	12440
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12443	33.608	NaN	20873	30	0	7169.1	0.106			+	4352	ATGRLGELLR	10	53	362.55212059853284	1084.6345323957985	3	362.55230712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATGRLGELLR_	REV__ENSG00000235961|ENST00000421798|PNMA6A	45.02220120713402	0.5028680121232791	2				NaN	NaN	0	NaN	8656	3785	12440
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12444	33.61	NaN	69979	30	0	7494.2	0.106				-1	 	0	88	466.75555966256974	931.4965663919395	2	466.7557678222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8657	3785	12440
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12445	33.611	NaN	28945	30	0	3850.4	0.106	+			5802	AVIDVGINR	9	73	478.7793245104313	955.5440960876626	2	478.7795715332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVIDVGINR_	ENSG00000065911|ENST00000394053|MTHFD2;nc|ENSG00000065911|P13995-2|MTHFD2	118.74307786436346	0.02196067127630568	2				NaN	NaN	0	NaN	8658	3785	12440
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12446	33.613	NaN	12209	30	0	5439.4	0.106			+	16641	HHPRHLGHR	9	67	573.8107504977987	1145.6069480623974	2	573.8116455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HHPRHLGHR_	REV__ENST00000398225.7_1_21:44073924-44151922:+|nuORF;REV__ENST00000398234.7_1_21:44073924-44153480:+|nuORF;REV__nc|ENSG00000160191|O76083-12|PDE9A	24.20275056022122	0.577060078256802	2				NaN	NaN	0	NaN	8659	3785	12440
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12447	33.615	NaN	4476	30	0	602.19	0.034	+			43160	TETGILKGV	9	60	459.26840505961553	NaN	0	459.2682800292969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TETGILKGV_	ENSG00000133316|ENST00000278856|WDR74;ENST00000453708.6_1_11:62603082-62607042:-|nuORF;ENST00000538277.1_1_11:62603381-62607042:-|nuORF;ENST00000540620.5_1_11:62602715-62607042:-|nuORF;ENST00000541930.5_1_11:62601897-62607060:-|nuORF;nc|ENSG00000133316|Q6RFH5-2|WDR74	40.77816245573522	0.2702456086868081	2				NaN	NaN	0	NaN	8660	3785	12440
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12460	33.642	NaN	15424	30	0	2201.8	0.214			+	24837	LIWVTMKQ	8	72	509.7906730832257	1017.5667932332515	2	509.79229736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LIWVTMKQ_	REV__ENSG00000113327|ENST00000639213|GABRG2;REV__GABRG2|p.A158Lfs*13|1|0.15|ENSG00000113327|chr5:162097776-162097776|A/-|frameshift_variant;REV__nc|ENSG00000113327|P18507-1|GABRG2;REV__nc|ENSG00000113327|P18507-3|GABRG2	65.80317337860623	0.44433089765398776	2				NaN	NaN	0	NaN	8670	3788	12459
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12461	33.646	NaN	8076	30	0	2860.1	0.106			+	35290	SALWQNKTK	9	55	359.2009124406775	1074.5809079222324	3	359.2012939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SALWQNKTK_	REV__NF1|p.K1386Rfs*20|1|0.33|ENSG00000196712|chr17:31252978-31252978|A/-|frameshift_variant	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	8671	3788	12459
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12462	33.648	NaN	3346.5	30	0	644.36	0.106	+			13053	GEYKIMVA	8	56	455.7380872557815	909.4616215783631	2	455.7384948730469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEYKIMVA_	ENSG00000105677|ENST00000222284|TMEM147;ENST00000477168.6_1_19:36036641-36037810:+|nuORF;ENST00000595467.1_1_19:36037522-36037810:+|nuORF;nc|ENSG00000105677|Q9BVK8-2|TMEM147	60.97194046774394	0.49215940876911696	2				NaN	NaN	0	NaN	8672	3788	12459
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12463	33.65	NaN	6755	30	0	1267.2	0.106				-1	LTMFCLLSL	9	42	366.5291473237021	1096.5656125713062	3	366.5294189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_LTMFC(Carbamidomethyl (C))LLSL_	ENST00000520258.1_1_8:41442372-41455860:+|nuORF	26.69291269510374	0.5537881896960711	2				NaN	NaN	0	NaN	8673	3788	12459
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12464	33.651	NaN	2525.3	30	0	306.79	0.106	+			28814	NPLAATHEF	9	61	500.24796628667787	998.4813796401558	2	500.2483215332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NPLAATHEF_	ENSG00000100403|ENST00000352645|ZC3H7B;ZC3H7B|p.G531Vfs*13|1|0.19|ENSG00000100403|chr22:41346130-41346130|G/-|frameshift_variant	62.107414245175825	0.1960472003779324	2				NaN	NaN	0	NaN	8674	3788	12459
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12465	33.653	NaN	2473.5	30	0	364.64	0.106			+	23771	LCIGWKLM	8	62	482.2613129063103	962.5080728794206	2	482.26171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LCIGWKLM_	REV__ENST00000608354.1_1_22:30642479-30642794:+|nuORF	37.028477286268924	0.6747514403204248	2				NaN	NaN	0	NaN	8675	3788	12459
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12466	33.655	NaN	4008.5	30	0	619.33	0.033	+			17554	IDVKVTSM	8	61	446.7434913819954	891.4724298307908	2	446.7440185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IDVKVTSM_	ENSG00000151176|ENST00000280800|PLBD2;nc|ENSG00000151176|Q8NHP8-2|PLBD2	69.6276240434122	0.4100012001731381	2				NaN	NaN	0	NaN	8676	3788	12459
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12477	33.68	NaN	12052	30	0	3226.9	0.214	+			47202	VMAKANEKK	9	78	509.7906730832257	1017.5667932332515	2	510.2923583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VMAKANEKK_	tr|U7T0H3|U7T0H3_FUSNUEthanolamineammonia-lyaselargesubunitOS=FusobacteriumnucleatumCTI-5OX=1316586GN=eutBPE=3SV=1	44.377184641726394	0.36891676396732553	2				NaN	NaN	0	NaN	8684	3791	12476
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12478	33.684	NaN	8836.7	30	0	872.97	0.106	+			49968	WAEEGQRVL	9	77	544.2796218279394	1086.5446907226788	2	544.2803344726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WAEEGQRVL_	ENSG00000196155|ENST00000379344|PLEKHG4;ENST00000563969.5_1_16:67314567-67322708:+|nuORF;nc|ENSG00000196155|Q58EX7-2|PLEKHG4;PLEKHG4|p.L616Wfs*32|1|0.43|ENSG00000196155|chr16:67284862-67284862|G/-|frameshift_variant	114.85826248499774	0.024312442104607014	2				NaN	NaN	0	NaN	8685	3791	12476
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12479	33.686	NaN	5887	30	0	948.13	0.106			+	28304	NEEVQIAL	8	57	458.24251141001974	914.4704698868395	2	458.2427673339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NEEVQIAL_	REV__CCDC13|p.G697Afs*3|1|0.38|ENSG00000244607|chr3:42709038-42709038|C/-|frameshift_variant;REV__ENSG00000244607|ENST00000310232|CCDC13	66.42927471994793	0.4381325844043345	2				NaN	NaN	0	NaN	8686	3791	12476
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12480	33.688	NaN	1384.7	30	0	143.33	0.106	+			13960	GSALGGVFK	9	48	418.23728826118327	NaN	0	418.2366027832031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GSALGGVFK_	ENSG00000174514|ENST00000367147|MFSD4A;nc|ENSG00000174514|Q8N468-2|MFSD4A	42.396135135203025	0.2590952873412954	2				NaN	NaN	0	NaN	8687	3791	12476
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12481	33.689	NaN	1967.4	30	0	171	0.106			+	9122	EGLFITNSL	9	57	497.26664088389776	NaN	0	497.2674865722656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EGLFITNSL_	REV__ENSG00000162594|ENST00000347310|IL23R;REV__nc|ENSG00000162594|Q5VWK5-2|IL23R;REV__nc|ENSG00000162594|Q5VWK5-5|IL23R;REV__nc|ENSG00000162594|Q5VWK5-6|IL23R;REV__nc|ENSG00000162594|Q5VWK5-7|IL23R	47.657333605630114	0.2228375344433429	2				NaN	NaN	0	NaN	8688	3791	12476
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12482	33.691	NaN	2368.3	30	0	154.68	0.106			+	5571	AVAQVIQHL	9	58	489.78978167769276	977.5650104221855	2	489.7901306152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AVAQVIQHL_	REV__ENST00000534523.1_1_11:90849456-90849543:+|nuORF	58.22992032128504	0.22837015374068087	2				NaN	NaN	0	NaN	8689	3791	12476
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12483	33.693	NaN	1874.8	30	0	327.7	0.039	+			43606	TIMPKDIQLAR	11	55	643.3690381447053	1284.7235233562105	2	643.3685302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TIMPKDIQLAR_	ENSG00000132475|ENST00000254810|H3-3B;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000168148|ENST00000366696|H3-4;ENSG00000183598|ENST00000331491|H3C13;ENSG00000188375|ENST00000340398|H3-5;ENSG00000197153|ENST00000359303|H3C12;ENSG00000197409|ENST00000356476|H3C4;ENSG00000203811|ENST00000369158|H3C14;ENSG00000203852|ENST00000403683|H3C15;ENSG00000273983|ENST00000614378|H3C8;ENSG00000274750|ENST00000614911|H3C6;ENSG00000275379|ENST00000616365|H3C11;ENSG00000275714|ENST00000613854|H3C1;ENSG00000277775|ENST00000618052|H3C7;ENSG00000278828|ENST00000685041|H3C10;ENST00000404612.1_1_6:26322106-26322214:-|nuORF;ENST00000593254.1_1_17:73774678-73775846:-|nuORF	38.714083909724	0.5755383074156426	2				NaN	NaN	0	NaN	8690	3791	12476
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12494	33.719	NaN	38103	30	0	14809	0.214	+			44953	TVAVPLVGK	9	71	442.2839537403346	882.5533545474692	2	442.2840576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVAVPLVGK_	ENSG00000136986|ENST00000259512|DERL1;nc|ENSG00000136986|Q9BUN8-2|DERL1	79.71258880314673	0.09879134589249085	2				NaN	NaN	0	NaN	8698	3794	12493
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12495	33.722	NaN	24789	30	0	4377.3	0.106	+			48860	VVCVEGIVTK	10	74	552.3093204707162	1102.6040880082323	2	552.3106079101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_VVC(Carbamidomethyl (C))VEGIVTK_	ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3	128.60217544463768	0.01518043149187549	2				NaN	NaN	0	NaN	8699	3794	12493
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12496	33.724	NaN	13128	30	0	1817.9	0.106			+	26785	LVRRYDVF	8	66	534.3032599370952	1066.5919669409902	2	534.3047485351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LVRRYDVF_	REV__ENSG00000101181|ENST00000370823|MTG2;REV__ENST00000466099.1_1_20:60768659-60775121:+|nuORF	45.9519527083369	0.6193794311207887	2				NaN	NaN	0	NaN	8700	3794	12493
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12497	33.726	NaN	20828	30	0	5682.6	0.106				-1	 	0	78	523.3153965163692	1044.6162400995383	2	523.3168334960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8701	3794	12493
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12498	33.728	NaN	2826.2	30	0	354.09	0.106			+	26156	LSQLTAQGP	9	59	457.7512315207229	NaN	0	457.75067138671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSQLTAQGP_	REV__ENSG00000160949|ENST00000409379|TONSL;REV__ENST00000497613.2_1_8:145658938-145666334:-|nuORF;REV__nc|ENSG00000160949|Q96HA7-2|TONSL	62.107414245175825	0.1403307765918332	2				NaN	NaN	0	NaN	8702	3794	12493
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12499	33.729	NaN	73607	30	0	10396	0.036	+			29163	NVIRDAVTY	9	95	525.7816698022527	1049.5487866713054	2	525.7828979492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NVIRDAVTY_	ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2	132.757866228626	0.013877640931359021	2				NaN	NaN	0	NaN	8703	3794	12493
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12500	33.73	NaN	7718.2	30	0	1540	0.14	+			40768	SVDKSVIVY	9	66	505.28156584861733	1008.5485787640347	2	505.281982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVDKSVIVY_	ENSG00000196151|ENST00000359774|WDSUB1	87.69643885390035	0.07135982304947239	2				NaN	NaN	0	NaN	8704	3794	12493
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12516	33.762	NaN	3787.8	30	0	639.82	0.214	+			25357	LPFSSHTY	8	71	476.23180578946614	950.4490586457323	2	476.231689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LPFSSHTY_	ENSG00000178974|ENST00000313833|FBXO34;FBXO34|p.L485Cfs*13|1|0.39|ENSG00000178974|chr14:55351837-55351837|T/-|frameshift_variant	101.21157088398209	0.2500103534009131	2				NaN	NaN	0	NaN	8717	3797	12515
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12517	33.765	NaN	5039.4	30	0	560.89	0.106				-1	 	0	62	493.22671087765474	984.4388688221095	2	493.2271423339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8718	3797	12515
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12518	33.767	NaN	4119.1	30	0	1527.5	0.106			+	9459	EKNGKELQI	9	65	529.7941013786535	1057.573649824107	2	529.7955322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EKNGKELQI_	REV__ENSG00000109805|ENST00000251496|NCAPG	87.69643885390035	0.07135982304947239	2				NaN	NaN	0	NaN	8719	3797	12515
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12519	33.769	NaN	2945.8	30	0	508.71	0.106	+			37958	SPFYPGKTTY	10	63	580.7842392050915	1159.5539254769828	2	580.7847900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SPFYPGKTTY_	ENSG00000124789|ENST00000262077|NUP153;nc|ENSG00000124789|P49790-2|NUP153;nc|ENSG00000124789|P49790-3|NUP153;NUP153|p.E1073Kfs*44|1|0.07|ENSG00000124789|chr6:17628983-17628983|T/-|frameshift_variant;NUP153|p.N411Ifs*2|1|0.17|ENSG00000124789|chr6:17662054-17662054|T/-|frameshift_variant;NUP153|p.S359Ffs*14|1|0.09|ENSG00000124789|chr6:17665380-17665381|-/TAGATAAGAAG|frameshift_variant;NUP153|p.T480Qfs*8|1|0.1|ENSG00000124789|chr6:17649257-17649258|GT/-|frameshift_variant	45.02220120713402	0.5028680121232791	2				NaN	NaN	0	NaN	8720	3797	12515
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12520	33.771	NaN	4964.4	30	0	1274.9	0.106			+	48130	VSVPGSARP	9	59	435.2449455452219	868.4753381572439	2	435.2453918457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSVPGSARP_	REV__ENST00000545888.6_1_12:57905867-57906065:+|nuORF	58.22992032128504	0.22837015374068087	2				NaN	NaN	0	NaN	8721	3797	12515
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12521	33.773	NaN	1212.2	30	0	110.66	0.037				-1	QIPCCSTGFA	10	55	570.7420654296875	NaN	0	570.7420654296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Carbamidomethyl (C)	_QIPC(Carbamidomethyl (C))C(Carbamidomethyl (C))STGFA_	ENST00000307089.7_1_1:46806587-46810525:+|nuORF	31.529811441608018	0.39664753963064203	2				NaN	NaN	0	NaN	8722	3797	12515
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12522	33.773	NaN	1722	30	0	223.95	0.14	+			28929	NRILHNDP	8	64	489.757849403639	NaN	0	489.759521484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NRILHNDP_	ENSG00000154310|ENST00000436636|TNIK;ENST00000484051.5_1_3:170784284-170800202:-|nuORF;nc|ENSG00000154310|Q9UKE5-2|TNIK;nc|ENSG00000154310|Q9UKE5-3|TNIK;nc|ENSG00000154310|Q9UKE5-4|TNIK;nc|ENSG00000154310|Q9UKE5-5|TNIK;nc|ENSG00000154310|Q9UKE5-6|TNIK;nc|ENSG00000154310|Q9UKE5-7|TNIK;nc|ENSG00000154310|Q9UKE5-8|TNIK;TNIK|p.E1253Kfs*13|1|0.04|ENSG00000154310|chr3:171066678-171066678|C/-|frameshift_variant;TNIK|p.F1336Lfs*15|1|0.15|ENSG00000154310|chr3:171063956-171063956|A/-|frameshift_variant;TNIK|p.V1263Cfs*3|1|0.42|ENSG00000154310|chr3:171066648-171066648|C/-|frameshift_variant	27.882242232435846	1.7418937515398478	2				NaN	NaN	0	NaN	8723	3797	12515
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12534	33.798	NaN	14410	30	0	3376.8	0.215	+			5210	ATTSVITIVK	10	76	516.8181248615396	1031.621696789879	2	516.8187866210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATTSVITIVK_	ENSG00000198517|ENST00000343242|MAFK	56.632244143249146	0.3964695498866976	2				NaN	NaN	0	NaN	8732	3800	12533
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12535	33.802	NaN	6503.1	30	0	937.17	0.033	+			7156	DAFKASVY	8	73	450.7261860842267	899.4378192352534	2	450.72637939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DAFKASVY_	ENSG00000163029|ENST00000448223|SMC6;nc|ENSG00000163029|Q96SB8-2|SMC6;SMC6|p.D983Lfs*3|1|0.06|ENSG00000163029|chr2:17670539-17670540|-/AG|frameshift_variant	138.8255168832474	0.2537552148063804	2				NaN	NaN	0	NaN	8733	3800	12533
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12547	33.827	NaN	13966	30	0	3727	0.214				-1	 	0	73	557.2998669945521	1112.585181055904	2	557.3009643554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8742	3803	12546
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12548	33.83	NaN	21952	30	0	3266.6	0.106	+			45743	VADTVARVL	9	76	472.28168387311723	942.5488148130345	2	472.2817687988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VADTVARVL_	ENSG00000145632|ENST00000274289|PLK2	80.45461616416974	0.09558281504443908	2				NaN	NaN	0	NaN	8743	3803	12546
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12549	33.832	NaN	5709.5	30	0	2243.1	0.106	+			10853	FATIKSASL	9	62	469.27123482439356	936.5279167155871	2	469.2711181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FATIKSASL_	ENSG00000135090|ENST00000392533|TAOK3	54.722347961057174	0.257609425301511	2				NaN	NaN	0	NaN	8744	3803	12546
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12550	33.834	NaN	2921.8	30	0	204.93	0.106	+			13608	GLWSVSPLP	9	59	478.2673967193665	NaN	0	478.26739501953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GLWSVSPLP_	ENST00000477157.5_1_22:17623970-17624138:-|nuORF	60.29395666154354	0.1480651883005104	2				NaN	NaN	0	NaN	8745	3803	12546
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12551	33.836	NaN	1595	30	0	219	0.106			+	18085	IKMWSHLY	8	56	539.2820907967744	1076.5496286603486	2	539.2830810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IKMWSHLY_	REV__ENSG00000127329|ENST00000334414|PTPRB;REV__ENST00000538174.6_1_12:70979073-71031175:-|nuORF;REV__ENST00000552253.1_1_12:70986014-71031175:-|nuORF;REV__PTPRB|p.N770Kfs*7|1|0.29|ENSG00000127329|chr12:70571966-70571967|-/T|frameshift_variant;REV__PTPRB|p.P1449Lfs*9|1|0.31|ENSG00000127329|chr12:70555303-70555303|G/-|frameshift_variant;REV__PTPRB|p.P401Lfs*55|1|0.07|ENSG00000127329|chr12:70590158-70590158|G/-|frameshift_variant;REV__PTPRB|p.Q169Rfs*46|1|0.53|ENSG00000127329|chr12:70622593-70622593|G/-|frameshift_variant	50.0245360154114	0.5941082100236891	2				NaN	NaN	0	NaN	8746	3803	12546
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12552	33.838	NaN	4156.1	30	0	740.27	0.035	+			19659	KDLPQSSLL	9	71	500.78656921878627	999.5585855043726	2	500.7868347167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KDLPQSSLL_	ENSG00000128536|ENST00000317716|CDHR3	58.22992032128504	0.22837015374068087	2				NaN	NaN	0	NaN	8747	3803	12546
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12553	33.838	NaN	1990.1	30	0	284.36	0.14	+			37130	SITSEVFNK	9	66	512.7693481445312	NaN	0	512.7693481445312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SITSEVFNK_	ENSG00000092201|ENST00000216297|SUPT16H;ENST00000556217.5_1_14:21837875-21852161:-|nuORF;SUPT16H|p.K393Sfs*29|2|0.2|ENSG00000092201|chr14:21364882-21364882|T/-|frameshift_variant;SUPT16H|p.L305Cfs*9|1|0.16|ENSG00000092201|chr14:21368310-21368310|A/-|frameshift_variant;SUPT16H|p.S365Mfs*24|1|0.04|ENSG00000092201|chr14:21365096-21365097|-/A|frameshift_variant;SUPT16H|p.Y764Cfs*2|1|0.36|ENSG00000092201|chr14:21359493-21359494|AT/-|frameshift_variant	44.377184641726394	0.24544280798894275	2				NaN	NaN	0	NaN	8748	3803	12546
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12563	33.863	NaN	6226.6	30	0	465.49	0.214	+			16282	HEGLVLTKL	9	71	505.3050408755102	1008.5955288178204	2	505.3053894042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HEGLVLTKL_	ENSG00000149932|ENST00000279396|TMEM219	109.47833844074708	0.029530294723441826	2				NaN	NaN	0	NaN	8755	3806	12562
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12564	33.866	NaN	3869.9	30	0	2001.1	0.106				-1	 	0	45	362.7406119481163	723.4666709630326	2	362.7406311035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8756	3806	12562
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12565	33.868	NaN	8132.9	30	0	1075.5	0.106				-1	 	0	74	500.2584091747264	998.5022654162528	2	500.25885009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8757	3806	12562
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12566	33.87	NaN	5489.3	30	0	503.91	0.106	+			28808	NPISGLGGTKY	11	71	553.794226471165	1105.5739000091298	2	553.7944946289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NPISGLGGTKY_	ENSG00000115641|ENST00000530340|FHL2	79.07001860377117	0.16012584326255155	2				NaN	NaN	0	NaN	8758	3806	12562
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12567	33.872	NaN	3115.7	30	0	373.01	0.106				-1	 	0	63	466.75555966256974	931.4965663919395	2	466.7552795410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8759	3806	12562
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12568	33.874	NaN	2370.2	30	0	136.6	0.035			+	2826	ASAALVDKCL	10	68	495.7700206167227	989.5254883002455	2	495.76763916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASAALVDKCL_	REV__ENSG00000129493|ENST00000543095|HEATR5A;REV__nc|ENSG00000129493|Q86XA9-2|HEATR5A;REV__nc|ENSG00000129493|Q86XA9|HEATR5A	63.53385203322761	0.33370026130094593	2				NaN	NaN	0	NaN	8760	3806	12562
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12569	33.874	NaN	3175	30	0	337.42	0.139	+			48345	VTGKCWVL	8	58	453.24879209451774	904.4830312558355	2	453.257568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VTGKCWVL_	nc|ENSG00000143297|Q96RD9-4|FCRL5	42.47446043378293	0.6409579893742323	2				NaN	NaN	0	NaN	8761	3806	12562
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12582	33.903	NaN	23136	30	0	9119.3	0.214	+			45433	TVYEEMMAK	9	68	551.2503122334219	1100.4860715336438	2	551.2517700195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVYEEMMAK_	ENSG00000144659|ENST00000650617|SLC25A38;SLC25A38|p.G301V|1|0.09|ENSG00000144659|chr3:39396507-39396507|G/T|missense_variant	120.8684288430529	0.02067403653475984	2				NaN	NaN	0	NaN	8771	3809	12581
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12583	33.906	NaN	13980	30	0	1751.1	0.106	+			6081	AVNALQSVY	9	81	482.7581274604998	963.5017019877996	2	482.75860595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVNALQSVY_	ENSG00000165078|ENST00000297770|CPA6	98.62937762414208	0.04060045538121712	2				NaN	NaN	0	NaN	8772	3809	12581
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12584	33.908	NaN	7021.4	30	0	781.88	0.106	+			49111	VVLGVGVAGL	10	61	442.2839537403346	882.5533545474692	2	442.2888488769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVLGVGVAGL_	ENSG00000170385|ENST00000367001|SLC30A1	77.94384346573518	0.21241958424364343	2				NaN	NaN	0	NaN	8773	3809	12581
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12585	33.91	NaN	8780.7	30	0	1251.3	0.106	+			48857	VVCGTPLFK	9	71	510.7808331165072	1019.5471132998144	2	510.7815856933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_VVC(Carbamidomethyl (C))GTPLFK_	ENSG00000174099|ENST00000308259|MSRB3;nc|ENSG00000174099|Q8IXL7|MSRB3	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	8774	3809	12581
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12586	33.912	NaN	9211.7	30	0	2208.9	0.106	+			264	AAMPGFIAK	9	64	453.24879209451774	904.4830312558355	2	453.249755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AAMPGFIAK_	ENSG00000122008|ENST00000241436|POLK;ENST00000506928.5_1_5:74842847-74879138:+|nuORF;ENST00000508867.5_1_5:74842847-74877278:+|nuORF;nc|ENSG00000122008|Q9UBT6-2|POLK;nc|ENSG00000122008|Q9UBT6-3|POLK;nc|ENSG00000122008|Q9UBT6-4|POLK;nc|ENSG00000122008|Q9UBT6-5|POLK;nc|ENSG00000122008|Q9UBT6-6|POLK;nc|ENSG00000122008|Q9UBT6-7|POLK;nc|ENSG00000122008|Q9UBT6-8|POLK;POLK|p.K571Nfs*18|1|0.29|ENSG00000122008|chr5:75596401-75596401|A/-|frameshift_variant	60.29395666154354	0.21116425950210296	2				NaN	NaN	0	NaN	8775	3809	12581
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12587	33.914	NaN	3396.4	30	0	590.44	0.106	+			33925	RRWISARQ	8	70	536.8098482161663	NaN	0	536.8096923828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RRWISARQ_	MKRN3|p.R348I|1|0.41|ENSG00000179455|chr15:23566825-23566825|G/T|missense_variant	33.51558372728122	1.7418937515398478	2				NaN	NaN	0	NaN	8776	3809	12581
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12588	33.916	NaN	2001.2	30	0	516.55	0.037	+			30836	QEFPYKSEM	9	53	579.7592765282412	1157.5040001232824	2	579.7604370117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QEFPYKSEM_	ENSG00000106546|ENST00000242057|AHR	35.15202426646627	0.4747332964206883	2				NaN	NaN	0	NaN	8777	3809	12581
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12600	33.941	NaN	19644	30	0	3583.2	0.214				-1	 	0	73	512.8126341737774	1023.6107154143548	2	512.813232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8786	3812	12599
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12601	33.944	NaN	4504.2	30	0	760.19	0.106			+	24225	LESIFNVV	8	66	460.75931032836536	NaN	0	460.7593994140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LESIFNVV_	REV__tr|U7STB7|U7STB7_FUSNUDNApolymeraseIOS=FusobacteriumnucleatumCTI-5OX=1316586GN=polAPE=3SV=1	73.97473282117947	1.7418937515398478	2				NaN	NaN	0	NaN	8787	3812	12599
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12602	33.946	NaN	6098.1	30	0	763.62	0.106			+	45708	VAALELNKL	9	62	485.79967199447685	969.5847910557537	2	485.79998779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VAALELNKL_	REV__ENSG00000116353|ENST00000263702|MECR;REV__ENST00000463052.5_1_1:29528537-29543205:-|nuORF;REV__ENST00000490529.5_1_1:29528540-29557400:-|nuORF	76.7741389293348	0.11149722112137898	2				NaN	NaN	0	NaN	8788	3812	12599
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12603	33.948	NaN	5526.5	30	0	866.61	0.106	+			21328	KLTTELVTK	9	74	516.8181248615396	1031.621696789879	2	516.8189086914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KLTTELVTK_	tr|U7SU03|U7SU03_FUSNUDisulfideisomeraseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01050PE=4SV=1	35.15202426646627	0.4747332964206883	2				NaN	NaN	0	NaN	8789	3812	12599
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12604	33.95	NaN	2506.1	30	0	182.77	0.106	+			26147	LSQGLNII	8	54	429.25740885787667	856.5002647825534	2	429.2578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSQGLNII_	ENST00000375678.7_3_20:31052756-31052930:-|nuORF	64.20726635412375	0.4601301477144759	2				NaN	NaN	0	NaN	8790	3812	12599
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12605	33.952	NaN	5427.1	30	0	926.84	0.038			+	-1	SSCLMLILIP	10	52	388.2116253985605	1161.6130467958815	3	388.212158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),Oxidation (M)	_SSC(Carbamidomethyl (C))LM(Oxidation (M))LILIP_	REV__ENST00000587250.3_1_17:41178007-41180165:+|nuORF	36.446750945000026	0.5818864909973037	2				NaN	NaN	0	NaN	8791	3812	12599
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12606	33.952	NaN	10042	30	0	2803	0.141				-1	 	0	69	564.3365168380542	1126.6584807429083	2	564.337158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8792	3812	12599
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12619	33.981	NaN	51348	30	0	9276.6	0.214				-1	 	0	82	480.2734314220435	958.532309910887	2	480.2736511230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8802	3815	12618
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12620	33.984	NaN	24815	30	0	7161	0.106	+			48671	VTSTFIIEK	9	79	519.2970343198068	1036.5795157064135	2	519.2977905273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTSTFIIEK_	ENSG00000126561|ENST00000590949|STAT5A;ENSG00000173757|ENST00000293328|STAT5B;ENST00000468312.1_1_17:40370167-40384145:-|nuORF;nc|ENSG00000126561|P42229-2|STAT5A;STAT5B|p.H584Tfs*8|3|0.33|ENSG00000173757|chr17:42210428-42210429|-/T|frameshift_variant;STAT5B|p.K583Nfs*16|2|0.34|ENSG00000173757|chr17:42210429-42210429|T/-|frameshift_variant	129.42129120953632	0.01549634589885217	2				NaN	NaN	0	NaN	8803	3815	12618
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12621	33.986	NaN	17205	30	0	1616.8	0.106				-1	 	0	81	522.8235418728092	1043.6325308124183	2	522.8245239257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8804	3815	12618
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12622	33.988	NaN	27680	30	0	8006.8	0.106				-1	 	0	80	537.3128711960994	1072.6111894589988	2	537.3134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8805	3815	12618
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12623	33.99	NaN	4850.5	30	0	534.93	0.106	+			25088	LLNGAKDAY	9	63	482.7581274604998	963.5017019877996	2	483.2598571777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LLNGAKDAY_	ENST00000292114.7_1_17:26688907-26688979:+|nuORF	49.536043120802724	0.308405419312776	2				NaN	NaN	0	NaN	8806	3815	12618
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12624	33.992	NaN	5308.9	30	0	1545.8	0.036	+			4578	ATLETILRH	9	46	351.87291706379807	1052.5969217915942	3	351.87310791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATLETILRH_	ENSG00000184677|ENST00000375647|ZBTB40;ZBTB40|p.K799Rfs*9|1|0.28|ENSG00000184677|chr1:22512063-22512063|C/-|frameshift_variant	25.450171626174864	0.5654022654467333	2				NaN	NaN	0	NaN	8807	3815	12618
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12625	33.992	NaN	2775.7	30	0	418.43	0.142				-1	FMVNTVQLKA	10	66	583.8147249366618	1165.6148969401236	2	583.81591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_FM(Oxidation (M))VNTVQLKA_	CCDC168|p.A3265Vfs*21|1|0.06|ENSG00000175820|chr13:102740903-102740904|-/GAAGAAAAATATA|frameshift_variant;CCDC168|p.A4132Qfs*29|1|0.23|ENSG00000175820|chr13:102738304-102738304|T/-|frameshift_variant;CCDC168|p.F3005Lfs*18|2|0.31|ENSG00000175820|chr13:102741682-102741682|A/-|frameshift_variant;CCDC168|p.G4714Rfs*2|1|0.22|ENSG00000175820|chr13:102736557-102736558|-/T|frameshift_variant;CCDC168|p.G6141Lfs*25|1|0.03|ENSG00000175820|chr13:102732276-102732277|-/AGGAAAAATCACCAAACACTAG|frameshift_variant;CCDC168|p.I1655Nfs*8|1|0.07|ENSG00000175820|chr13:102745733-102745734|-/AACTTAAAACAAT|frameshift_variant;CCDC168|p.K5937Nfs*10|1|0.37|ENSG00000175820|chr13:102732886-102732886|T/-|frameshift_variant;CCDC168|p.K6236Nfs*3|1|0.42|ENSG00000175820|chr13:102731989-102731989|T/-|frameshift_variant;CCDC168|p.L3176Ifs*8|1|0.42|ENSG00000175820|chr13:102741171-102741172|-/T|frameshift_variant;CCDC168|p.L5048Ifs*6|1|0.12|ENSG00000175820|chr13:102735555-102735556|-/T|frameshift_variant;CCDC168|p.L5234*|1|0.12|ENSG00000175820|chr13:102735001-102735001|A/-|frameshift_variant;CCDC168|p.L758Wfs*27|1|0.11|ENSG00000175820|chr13:102748424-102748424|A/-|frameshift_variant;CCDC168|p.M1116Nfs*6|1|0.25|ENSG00000175820|chr13:102747350-102747351|-/T|frameshift_variant;CCDC168|p.M1116Wfs*8|1|0.14|ENSG00000175820|chr13:102747351-102747351|T/-|frameshift_variant;CCDC168|p.M5025Cfs*8|1|0.29|ENSG00000175820|chr13:102735624-102735624|T/-|frameshift_variant;CCDC168|p.N1192Tfs*3|1|0.1|ENSG00000175820|chr13:102747122-102747122|T/-|frameshift_variant;CCDC168|p.N2119Kfs*18|1|0.41|ENSG00000175820|chr13:102744340-102744341|-/T|frameshift_variant;CCDC168|p.T2792Dfs*27|1|0.25|ENSG00000175820|chr13:102742324-102742325|-/T|frameshift_variant;CCDC168|p.T4543Lfs*5|1|0.1|ENSG00000175820|chr13:102737070-102737070|T/-|frameshift_variant;ENSG00000175820|ENST00000322527|CCDC168	35.61828744233558	0.588957954432594	2				NaN	NaN	0	NaN	8808	3815	12618
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12636	34.019	NaN	228360	30	0	34482	0.213	+			36040	SEISNIARV	9	101	494.77425080945386	987.5339486857077	2	494.7744445800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEISNIARV_	ENSG00000016490|ENST00000394711|CLCA1	167.22876102047192	0.0032399547248545047	2				NaN	NaN	0	NaN	8816	3818	12635
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12637	34.023	NaN	16628	30	0	1662.9	0.106				-1	 	0	94	461.7708297755802	921.5271066179604	2	461.7713317871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8817	3818	12635
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12638	34.025	NaN	9047.4	30	0	790.2	0.106	+			27689	MPVGMTHGL	9	76	471.72970636801654	941.4448598028331	2	471.7301330566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MPVGMTHGL_	ENSG00000092203|ENST00000448790|TOX4;nc|ENSG00000092203|O94842-2|TOX4;TOX4|p.G159Vfs*126|1|0.32|ENSG00000092203|chr14:21488743-21488743|G/-|frameshift_variant;TOX4|p.Q486Hfs*16|1|0.55|ENSG00000092203|chr14:21493073-21493073|A/-|frameshift_variant;TOX4|p.T456Dfs*60|1|0.38|ENSG00000092203|chr14:21492975-21492976|-/C|frameshift_variant	73.97473282117947	0.12360187025703594	2				NaN	NaN	0	NaN	8818	3818	12635
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12639	34.027	NaN	3847.1	30	0	406.32	0.106	+			47342	VPDSSGPERIL	11	68	585.3112590285938	1168.6079651239875	2	585.3121337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VPDSSGPERIL_	ENSG00000165119|ENST00000376263|HNRNPK;nc|ENSG00000165119|P61978-3|HNRNPK;nc|ENSG00000165119|P61978|HNRNPK	41.080066990542036	0.5431644350485484	2				NaN	NaN	0	NaN	8819	3818	12635
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12640	34.029	NaN	4206.8	30	0	699.48	0.106			+	45132	TVKTFSALQ	9	71	497.7820620810799	993.5495712289598	2	497.78204345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TVKTFSALQ_	REV__ENSG00000064692|ENST00000261368|SNCAIP;REV__ENST00000510003.5_1_5:121726829-121776497:+|nuORF;REV__nc|ENSG00000064692|Q9Y6H5-3|SNCAIP;REV__nc|ENSG00000064692|Q9Y6H5-4|SNCAIP;REV__nc|ENSG00000064692|Q9Y6H5-6|SNCAIP	63.53385203322761	0.18415635464017938	2				NaN	NaN	0	NaN	8820	3818	12635
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12641	34.03	NaN	8741.8	30	0	2337.2	0.035			+	38328	SRGNATMTY	9	66	500.7293276445532	999.4441023559065	2	500.7293395996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SRGNATMTY_	REV__ENSG00000163520|ENST00000404922|FBLN2;REV__nc|ENSG00000163520|P98095|FBLN2	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	8821	3818	12635
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12642	34.031	NaN	4793.2	30	0	1383.7	0.139	+			25847	LSEQPARA	8	54	436.23469982494447	870.454846716689	2	436.2348327636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSEQPARA_	PPP2R5B|p.G18Rfs*72|1|0.34|ENSG00000068971|chr11:64925780-64925781|-/C|frameshift_variant	55.50420428727701	0.5462892107279674	2				NaN	NaN	0	NaN	8822	3818	12635
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12653	34.057	NaN	3289.7	30	0	437.52	0.214	+			4789	ATNKITIIFK	10	73	574.8545555327202	1147.6945581322402	2	574.8554077148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATNKITIIFK_	ENSG00000174136|ENST00000513185|RGMB;RGMB|p.E393Gfs*29|1|0.64|ENSG00000174136|chr5:98793614-98793615|-/G|frameshift_variant	69.2159832094219	0.2837254504153858	2				NaN	NaN	0	NaN	8830	3821	12652
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12654	34.061	NaN	4844.9	30	0	473.97	0.106	+			24912	LKPELQTAL	9	74	506.8050210118017	1011.5954890904035	2	506.8057861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LKPELQTAL_	ENSG00000131023|ENST00000543571|LATS1;ENST00000441107.5_1_6:149982867-150018260:-|nuORF;ENST00000542747.5_1_6:149997344-150023094:-|nuORF;LATS1|p.E689Nfs*18|1|0.35|ENSG00000131023|chr6:149680404-149680404|T/-|frameshift_variant;LATS1|p.F1039Lfs*19|1|0.19|ENSG00000131023|chr6:149662005-149662005|A/-|frameshift_variant;LATS1|p.K662Nfs*3|1|0.44|ENSG00000131023|chr6:149683103-149683103|T/-|frameshift_variant;LATS1|p.Y808Nfs*12|1|0.09|ENSG00000131023|chr6:149680046-149680047|-/ATTTATT|frameshift_variant;nc|ENSG00000131023|O95835-2|LATS1	58.22992032128504	0.22837015374068087	2				NaN	NaN	0	NaN	8831	3821	12652
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12655	34.063	NaN	2737.4	30	0	654.17	0.033	+			41316	SVLPSPAHA	9	49	439.739626730081	877.464700526962	2	439.7393493652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVLPSPAHA_	ENSG00000197046|ENST00000389474|SIGLEC15;nc|ENSG00000197046|Q6ZMC9-2|SIGLEC15	45.9519527083369	0.35044536499095585	2				NaN	NaN	0	NaN	8832	3821	12652
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12666	34.087	NaN	10280	30	0	1112.8	0.214	+			29164	NVIRDAVTY	9	78	525.7816698022527	1049.5487866713054	2	525.7826538085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NVIRDAVTY_	ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2	67.49366992349736	0.1516260258713357	2				NaN	NaN	0	NaN	8840	3824	12665
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12667	34.091	NaN	18427	30	0	2202.9	0.106	+			23475	LAEVGRVL	8	71	428.765804239713	NaN	0	428.765869140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LAEVGRVL_	ENSG00000010165|ENST00000361735|METTL13;METTL13|p.L636Pfs*8|1|0.12|ENSG00000010165|chr1:171796557-171796558|-/C|frameshift_variant;nc|ENSG00000010165|Q8N6R0-1|METTL13;nc|ENSG00000010165|Q8N6R0-2|METTL13;nc|ENSG00000010165|Q8N6R0-3|METTL13;nc|ENSG00000010165|Q8N6R0-4|METTL13	76.7741389293348	1.7418937515398478	2				NaN	NaN	0	NaN	8841	3824	12665
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12668	34.093	NaN	4751.3	30	0	1842.9	0.106	+			30837	QEFQVNKL	8	63	503.27127745319086	1004.5280019731817	2	503.27178955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QEFQVNKL_	CCDC6|p.E316Yfs*13|1|0.04|ENSG00000108091|chr10:59806980-59806981|-/TTTGGTA|frameshift_variant;ENSG00000108091|ENST00000263102|CCDC6	68.78682469695295	0.41700713582915416	2				NaN	NaN	0	NaN	8842	3824	12665
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12669	34.095	NaN	5050.3	30	0	744.61	0.106	+			28754	NPARDAALF	9	73	487.7559391135262	973.4973252938524	2	487.7565612792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NPARDAALF_	ENSG00000102554|ENST00000377687|KLF5;nc|ENSG00000102554|Q13887-2|KLF5;nc|ENSG00000102554|Q13887-3|KLF5	56.43379154798735	0.2433427591689151	2				NaN	NaN	0	NaN	8843	3824	12665
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12670	34.096	NaN	5326.8	30	0	520.82	0.106	+			51411	YTQMKNIL	8	69	505.7699582336919	1009.5253635341838	2	505.7701416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YTQMKNIL_	tr|U7SHE9|U7SHE9_FUSNUAldehydedehydrogenasedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02287PE=3SV=1	76.84663266511073	0.3498490246073164	2				NaN	NaN	0	NaN	8844	3824	12665
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12671	34.098	NaN	4338.7	30	0	506.8	0.036	+			31798	QPMEVQEGY	9	63	540.7362563949808	1079.4579598567616	2	540.7372436523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QPMEVQEGY_	ENSG00000130726|ENST00000253024|TRIM28;ENST00000601150.5_1_19:59059168-59060232:+|nuORF;nc|ENSG00000130726|Q13263-2|TRIM28	58.22992032128504	0.22837015374068087	2				NaN	NaN	0	NaN	8845	3824	12665
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12672	34.099	NaN	15292	30	0	9530.8	0.143				-1	 	0	43	339.214530672972	1014.621762619116	3	339.2148132324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8846	3824	12665
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12684	34.126	NaN	4368.9	30	0	339.46	0.214	+			36456	SEVLLRSV	8	61	451.76836289208745	901.5221728509749	2	451.7684631347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEVLLRSV_	ENSG00000112175|ENST00000370830|BMP5;nc|ENSG00000112175|P22003-2|BMP5	95.81516180277367	0.2598660847282228	2				NaN	NaN	0	NaN	8855	3827	12683
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12685	34.13	NaN	3422.7	30	0	723.82	0.106				-1	 	0	60	423.2652816764496	844.5160104196992	2	423.2657165527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8856	3827	12683
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12686	34.132	NaN	2615	30	0	363.76	0.106	+			23794	LCLWGIAL	8	61	444.75511162522906	NaN	0	444.75518798828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LCLWGIAL_	ENSG00000121900|ENST00000373463|TMEM54;ENST00000482771.1_1_1:33360408-33361058:-|nuORF;nc|ENSG00000121900|Q969K7-2|TMEM54;nc|ENSG00000121900|Q969K7-3|TMEM54	43.626045697637714	1.7418937515398478	2				NaN	NaN	0	NaN	8857	3827	12683
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12687	34.133	NaN	3199.2	30	0	237.05	0.106			+	-1	VITMWSLAM	9	69	534.2665969702439	NaN	0	534.2665405273438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_VITM(Oxidation (M))WSLAM_	REV__ENSG00000269556|ENST00000600449|TMEM185A;REV__ENST00000524311.1_1_X:148850572-148853026:+|nuORF	42.47446043378293	0.25855550551448697	2				NaN	NaN	0	NaN	8858	3827	12683
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12688	34.135	NaN	1810.5	30	0	438.06	0.106	+			42151	SYRKRQEHP	9	63	600.8158347628145	1199.6171165924288	2	600.81640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SYRKRQEHP_	ENST00000368474.8_1_1:154574483-154574669:-|nuORF	32.81241826257853	0.4965981579233955	2				NaN	NaN	0	NaN	8859	3827	12683
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12689	34.137	NaN	4119.3	30	0	356.82	0.106	+			48349	VTGLSPGVTY	10	71	497.26664088389776	NaN	0	497.2660827636719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTGLSPGVTY_	ENSG00000115414|ENST00000354785|FN1;FN1|p.L1714*|1|0.2|ENSG00000115414|chr2:215380832-215380832|G/-|frameshift_variant;FN1|p.S1791Rfs*9|1|0.07|ENSG00000115414|chr2:215378239-215378239|A/-|frameshift_variant;nc|ENSG00000115414|P02751-1|FN1;nc|ENSG00000115414|P02751-10|FN1;nc|ENSG00000115414|P02751-11|FN1;nc|ENSG00000115414|P02751-12|FN1;nc|ENSG00000115414|P02751-13|FN1;nc|ENSG00000115414|P02751-14|FN1;nc|ENSG00000115414|P02751-17|FN1;nc|ENSG00000115414|P02751-3|FN1;nc|ENSG00000115414|P02751-4|FN1;nc|ENSG00000115414|P02751-5|FN1;nc|ENSG00000115414|P02751-6|FN1;nc|ENSG00000115414|P02751-7|FN1;nc|ENSG00000115414|P02751-8|FN1;nc|ENSG00000115414|P02751-9|FN1	60.97194046774394	0.22634118066553113	2				NaN	NaN	0	NaN	8860	3827	12683
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12690	34.139	NaN	1884.5	30	0	147	0.034			+	25798	LSAVADAAVL	10	60	465.26840681337444	928.5222606935489	2	465.2685241699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSAVADAAVL_	REV__ENSG00000126264|ENST00000246551|HCST;REV__nc|ENSG00000126264|Q9UBK5-2|HCST	68.78682469695295	0.28723163847957256	2				NaN	NaN	0	NaN	8861	3827	12683
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12702	34.164	NaN	15386	30	0	2148.2	0.215	+			50627	YEAVREVL	8	69	489.76609331820265	977.5176337032053	2	489.76629638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YEAVREVL_	ENSG00000198755|ENST00000322203|RPL10A;ENST00000464112.5_1_6:35436546-35438524:+|nuORF;ENST00000467020.5_1_6:35436211-35436817:+|nuORF;ENST00000472730.1_1_3:61728131-61728755:-|nuORF;ENST00000490335.4_1_6:35436211-35436651:+|nuORF;RPL10A|p.P135Lfs*17|1|0.35|ENSG00000198755|chr6:35470270-35470270|C/-|frameshift_variant	65.46538089061403	0.44767499471257033	2				NaN	NaN	0	NaN	8870	3830	12701
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12703	34.168	NaN	5555.5	30	0	789.95	0.106	+			481	AAYDSLVVGK	10	66	511.77946611390735	1021.5443792946147	2	511.7794494628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAYDSLVVGK_	ENSG00000128283|ENST00000249014|CDC42EP1;nc|ENSG00000128283|Q00587-2|CDC42EP1	80.45461616416974	0.1919067876629769	2				NaN	NaN	0	NaN	8871	3830	12701
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12704	34.17	NaN	8980.8	30	0	1305.8	0.106	+			12500	GEEKLIASV	9	78	473.2656158056598	944.5166786781197	2	473.26580810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEEKLIASV_	ENSG00000130713|ENST00000372358|EXOSC2;ENST00000430138.6_1_9:133569178-133570981:+|nuORF;ENST00000463488.1_1_9:133569202-133574940:+|nuORF;ENST00000491115.6_1_9:133569178-133574746:+|nuORF;nc|ENSG00000130713|Q13868-2|EXOSC2;nc|ENSG00000130713|Q13868-3|EXOSC2	120.8684288430529	0.02067403653475984	2				NaN	NaN	0	NaN	8872	3830	12701
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12705	34.171	NaN	3861.9	30	0	652.18	0.106	+			23814	LCQNPKLAL	9	65	500.2885975195286	998.5626421058572	2	500.28924560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LCQNPKLAL_	CBL|p.L272*|1|0.25|ENSG00000110395|chr11:119274894-119274894|T/-|frameshift_variant;CBL|p.V581Cfs*4|1|0.08|ENSG00000110395|chr11:119285359-119285360|-/C|frameshift_variant;ENSG00000110395|ENST00000264033|CBL	35.61828744233558	0.47037581924408073	2				NaN	NaN	0	NaN	8873	3830	12701
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12706	34.173	NaN	6051	30	0	668.88	0.106	+			28829	NPNSPSITY	9	70	496.73734848062094	991.4601440280419	2	496.7373352050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NPNSPSITY_	ENSG00000100632|ENST00000557016|ERH;ENST00000216520.6_1_14:69847257-69864987:-|nuORF	62.107414245175825	0.1960472003779324	2				NaN	NaN	0	NaN	8874	3830	12701
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12707	34.175	NaN	1080.8	30	0	91.608	0.106	+			12636	GEIILHSV	8	44	434.2498515423594	866.4851501515188	2	434.2501220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GEIILHSV_	ENSG00000139350|ENST00000266742|NEDD1;nc|ENSG00000139350|Q8NHV4-2|NEDD1;nc|ENSG00000139350|Q8NHV4-3|NEDD1	53.351449002276354	0.5676011784961348	2				NaN	NaN	0	NaN	8875	3830	12701
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12708	34.177	NaN	2169.8	30	0	91.291	0.036			+	29781	PIIRECTLD	9	66	530.2780984393457	1058.5416439454914	2	530.279541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PIIRECTLD_	REV__tr|U7SQT1|U7SQT1_FUSNUATPsynthasegammachainOS=FusobacteriumnucleatumCTI-5OX=1316586GN=atpGPE=3SV=1	24.20275056022122	0.577060078256802	2				NaN	NaN	0	NaN	8876	3830	12701
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12720	34.202	NaN	6778.5	30	0	1201.3	0.214	+			4326	ATGLPISMK	9	68	459.25964571197756	916.5047384907551	2	459.2597351074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATGLPISMK_	CD40LG|p.I33Sfs*4|1|0.75|ENSG00000102245|chrX:136648337-136648337|T/-|frameshift_variant;ENSG00000102245|ENST00000370629|CD40LG	77.31757898189308	0.1091473830098891	2				NaN	NaN	0	NaN	8885	3833	12719
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12721	34.205	NaN	5848.3	30	0	927.51	0.106	+			15280	GTVAFALTK	9	76	454.2653554859253	906.5161580386506	2	454.265380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTVAFALTK_	ENSG00000127080|ENST00000287996|IPPK	104.01359247289065	0.03510646158778409	2				NaN	NaN	0	NaN	8886	3833	12719
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12722	34.207	NaN	5686.8	30	0	724.18	0.106	+			50497	YAMKAEVL	8	74	462.7459636085307	923.4773742838614	2	462.74652099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YAMKAEVL_	ENSG00000183576|ENST00000331768|SETD3	58.78195531508484	0.5138399468736706	2				NaN	NaN	0	NaN	8887	3833	12719
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12723	34.209	NaN	5344.6	30	0	484.7	0.106	+			35476	SATETCYTY	9	72	519.7073057588086	1037.4000585844171	2	519.708740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SATETCYTY_	ENSG00000132465|ENST00000254801|JCHAIN	58.78195531508484	0.22376836668196862	2				NaN	NaN	0	NaN	8888	3833	12719
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12724	34.211	NaN	5543	30	0	1286.1	0.106	+			51543	YYDKHFTEF	9	57	417.188538775835	1248.543786927705	3	417.18927001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YYDKHFTEF_	ENSG00000114573|ENST00000273398|ATP6V1A;nc|ENSG00000114573|P38606-2|ATP6V1A	33.51558372728122	0.4900267029546261	2				NaN	NaN	0	NaN	8889	3833	12719
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12725	34.213	NaN	2936.8	30	0	283.24	0.036			+	20634	KGGHEVDIDV	10	68	534.771042355608	1067.5275317780158	2	534.7730102539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KGGHEVDIDV_	REV__ENSG00000161011|ENST00000389805|SQSTM1;REV__ENST00000466342.1_1_5:179250916-179260288:+|nuORF;REV__nc|ENSG00000161011|Q13501-2|SQSTM1	45.97224482568171	0.49411383603842696	2				NaN	NaN	0	NaN	8890	3833	12719
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12726	34.213	NaN	3676.8	30	0	485.23	0.14	+			30671	QAYSGIQQY	9	62	529.2501688198445	1056.4857847064889	2	529.25244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QAYSGIQQY_	CELF2|p.A423Gfs*31|1|0.4|ENSG00000048740|chr10:11325842-11325843|-/G|frameshift_variant;ENSG00000048740|ENST00000633077|CELF2;ENSG00000149187|ENST00000687097|CELF1;nc|ENSG00000048740|O95319-2|CELF2;nc|ENSG00000048740|O95319-3|CELF2;nc|ENSG00000048740|O95319-4|CELF2;nc|ENSG00000048740|O95319-5|CELF2;nc|ENSG00000048740|O95319|CELF2;nc|ENSG00000149187|Q92879-2|CELF1;nc|ENSG00000149187|Q92879-3|CELF1;nc|ENSG00000149187|Q92879-4|CELF1;nc|ENSG00000149187|Q92879-5|CELF1;nc|ENSG00000149187|Q92879-6|CELF1;nc|ENSG00000149187|Q92879|CELF1	77.31757898189308	0.1091473830098891	2				NaN	NaN	0	NaN	8891	3833	12719
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12737	34.24	NaN	6170.8	30	0	827.68	0.214			+	13818	GQPQDVSVY	9	71	496.73734848062094	991.4601440280419	2	496.73785400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GQPQDVSVY_	REV__ENST00000335997.11_1_X:129200182-129200299:-|nuORF	71.29570347882199	0.13518600952103718	2				NaN	NaN	0	NaN	8899	3836	12736
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12738	34.243	NaN	11202	30	0	1663.7	0.106	+			3044	ASFILGTGK	9	66	447.25776448284626	892.5009760324925	2	447.2581481933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASFILGTGK_	CDCA2|p.N847Mfs*14|1|0.15|ENSG00000184661|chr8:25507200-25507200|A/-|frameshift_variant;ENSG00000184661|ENST00000330560|CDCA2;nc|ENSG00000184661|Q69YH5-2|CDCA2	123.20810148215591	0.019257656778428764	2				NaN	NaN	0	NaN	8900	3836	12736
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12739	34.245	NaN	6175.4	30	0	1197.4	0.106	+			45250	TVQELAIYK	9	65	532.802247904056	1063.589942874912	2	532.80322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVQELAIYK_	ENSG00000102595|ENST00000376747|UGGT2;nc|ENSG00000102595|Q9NYU1-2|UGGT2;UGGT2|p.N1268Ifs*10|1|0.3|ENSG00000102595|chr13:95859613-95859613|T/-|frameshift_variant	146.78539889680295	0.007618400906539062	2				NaN	NaN	0	NaN	8901	3836	12736
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12740	34.247	NaN	2922.1	30	0	257.99	0.106	+			42247	TAAPSLKNAAF	11	62	545.7977991022515	1089.5810452713029	2	545.799072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TAAPSLKNAAF_	ENSG00000116459|ENST00000369722|ATP5PB;ENST00000369721.8_1_1:111992139-111998768:+|nuORF;ENST00000468818.1_1_1:111992163-111998855:+|nuORF	48.601550744091256	0.44024757269956427	2				NaN	NaN	0	NaN	8902	3836	12736
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12741	34.249	NaN	2535	30	0	439.45	0.106	+			17120	HSMDMKFTY	9	66	580.2483352141306	1158.4821174950612	2	580.75146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HSMDMKFTY_	ENSG00000116016|ENST00000263734|EPAS1	72.87924865735499	0.12833875048249987	2				NaN	NaN	0	NaN	8903	3836	12736
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12742	34.251	NaN	3691.7	30	0	777.54	0.106	+			38311	SRCPPSRRS	9	67	523.2704211570608	1044.5262893809215	2	523.2711181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SRCPPSRRS_	CCDC116|p.S388Pfs*52|1|0.27|ENSG00000161180|chr22:21635220-21635220|C/-|frameshift_variant	47.657333605630114	0.33044192980041115	2				NaN	NaN	0	NaN	8904	3836	12736
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12743	34.252	NaN	12829	30	0	1682.1	0.037	+			10173	ESYSVYVYK	9	69	569.2763868758005	1136.538220818401	2	569.7785034179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ESYSVYVYK_	ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;nc|ENSG00000203814|Q5QNW6-2|H2BC18	46.45678178249821	0.34452392205506005	2				NaN	NaN	0	NaN	8905	3836	12736
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12755	34.278	NaN	14931	30	0	2098	0.214	+			26019	LSLEGKPL	8	72	428.76055724390454	855.5065615546091	2	428.7606506347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSLEGKPL_	ENSG00000154783|ENST00000285046|FGD5;FGD5|p.D818*|1|0.19|ENSG00000154783|chr3:14821521-14821522|-/C|frameshift_variant;FGD5|p.T1238Pfs*9|1|0.25|ENSG00000154783|chr3:14922447-14922447|C/-|frameshift_variant	101.60071028292904	0.24979566554663588	2				NaN	NaN	0	NaN	8914	3839	12754
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12756	34.281	NaN	27064	30	0	17572	0.106	+			41281	SVLLFVTKK	9	56	345.5582520074443	1033.652926622533	3	345.5583801269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVLLFVTKK_	ENSG00000198231|ENST00000389924|DDX42;ENST00000578593.1_1_17:61889231-61895755:+|nuORF;nc|ENSG00000198231|Q86XP3-2|DDX42	65.15724298150197	0.17062369902793603	2				NaN	NaN	0	NaN	8915	3839	12754
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12757	34.283	NaN	9701.3	30	0	3684.6	0.106			+	23392	LAAFHPIEVI	10	56	370.54973764886483	1108.6273835467946	3	370.5497741699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LAAFHPIEVI_	REV__ANK2|p.E1746*|1|0.07|ENSG00000145362|chr4:113353848-113353849|-/C|frameshift_variant;REV__ANK2|p.N1476Mfs*12|1|0.21|ENSG00000145362|chr4:113350244-113350244|A/-|frameshift_variant;REV__ANK2|p.R2581Efs*5|1|0.41|ENSG00000145362|chr4:113356352-113356353|-/A|frameshift_variant;REV__ENSG00000145362|ENST00000357077|ANK2;REV__nc|ENSG00000145362|Q01484-2|ANK2;REV__nc|ENSG00000145362|Q01484-5|ANK2	33.51558372728122	0.606129482617362	2				NaN	NaN	0	NaN	8916	3839	12754
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12758	34.285	NaN	5202	30	0	496.22	0.106	+			35781	SEAEKVYIV	9	75	519.2785784669799	1036.5426040007596	2	519.2791748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SEAEKVYIV_	ENSG00000075914|ENST00000265564|EXOSC7	63.53385203322761	0.18415635464017938	2				NaN	NaN	0	NaN	8917	3839	12754
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12759	34.287	NaN	7242.3	30	0	1088.9	0.106	+			8474	EASKLVMSY	9	77	514.2595528886271	1026.5045528440542	2	514.2603759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EASKLVMSY_	ENSG00000128641|ENST00000392318|MYO1B;ENSG00000166866|ENST00000300119|MYO1A;ENST00000471904.1_1_2:192128111-192215016:+|nuORF;MYO1B|p.A603Sfs*37|1|0.42|ENSG00000128641|chr2:191390310-191390311|-/A|frameshift_variant;MYO1B|p.F948Cfs*47|1|0.41|ENSG00000128641|chr2:191411140-191411141|-/TG|frameshift_variant;MYO1B|p.S730Afs*4|2|0.4|ENSG00000128641|chr2:191393178-191393178|A/-|frameshift_variant;nc|ENSG00000128641|O43795-2|MYO1B	143.8867514904718	0.008656634767784652	2				NaN	NaN	0	NaN	8918	3839	12754
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12760	34.289	NaN	3729.9	30	0	472.32	0.036	+			46842	VIFKDFVNK	9	69	555.3207726359709	1108.6269923387417	2	555.3218383789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VIFKDFVNK_	ENSG00000173821|ENST00000582970|RNF213;ENST00000559070.5_1_17:78261823-78310301:+|nuORF;nc|ENSG00000173821|Q63HN8-4|RNF213;nc|ENSG00000173821|Q63HN8|RNF213;RNF213|p.C5022Lfs*7|1|0.3|ENSG00000173821|chr17:80389237-80389237|G/-|frameshift_variant;RNF213|p.P2167Lfs*64|1|0.09|ENSG00000173821|chr17:80344834-80344835|-/T|frameshift_variant;RNF213|p.Q1953Rfs*50|2|0.13|ENSG00000173821|chr17:80340219-80340219|C/-|frameshift_variant	80.45461616416974	0.09558281504443908	2				NaN	NaN	0	NaN	8919	3839	12754
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12761	34.289	NaN	3945.8	30	0	588.32	0.14	+			19622	KDIHNLEF	8	62	508.26344097492256	1014.5123290166451	2	508.2635803222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KDIHNLEF_	ENSG00000198346|ENST00000396403|ZNF813;ZNF813|p.C260Vfs*4|1|0.03|ENSG00000198346|chr19:53491008-53491009|-/G|frameshift_variant	56.72105179125745	0.5342425954139568	2				NaN	NaN	0	NaN	8920	3839	12754
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12773	34.316	NaN	26032	30	0	6159.1	0.214	+			42872	TEGYQPPPV	9	76	494.2422839785016	986.4700150238032	2	494.24249267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEGYQPPPV_	ENSG00000108639|ENST00000225777|SYNGR2;ENST00000592456.1_1_17:76167504-76168014:+|nuORF	101.25262130126117	0.03792372629710479	2				NaN	NaN	0	NaN	8929	3842	12772
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12774	34.32	NaN	18485	30	0	4221.9	0.106	+			47877	VSLGTPIMK	9	74	473.27519589082783	944.5358388484557	2	473.2752685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSLGTPIMK_	ECT2|p.K832Rfs*25|1|0.1|ENSG00000114346|chr3:172815693-172815693|A/-|frameshift_variant;ENSG00000114346|ENST00000392692|ECT2;nc|ENSG00000114346|Q9H8V3-2|ECT2;nc|ENSG00000114346|Q9H8V3-3|ECT2;nc|ENSG00000114346|Q9H8V3-4|ECT2	162.25246889848123	0.0040893836092247005	2				NaN	NaN	0	NaN	8930	3842	12772
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12775	34.322	NaN	4242.6	30	0	1159.5	0.106	+			25108	LLPPPALK	8	58	424.7832773542546	847.5520017753092	2	424.7836608886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LLPPPALK_	ARHGAP31|p.S671L|1|0.05|ENSG00000031081|chr3:119413941-119413941|C/T|missense_variant;ENSG00000120341|ENST00000308284|SEC16B;ENST00000464428.2_1_1:177898995-177929556:-|nuORF;ENST00000466953.6_1_1:177898995-177928232:-|nuORF	46.76643321282427	0.6143254112625767	2				NaN	NaN	0	NaN	8931	3842	12772
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12776	34.324	NaN	4086.3	30	0	754.32	0.106				-1	 	0	64	564.3365168380542	1126.6584807429083	2	564.3374633789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8932	3842	12772
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12777	34.326	NaN	1981	30	0	444.72	0.106	+			25537	LPTPKGGK	8	47	399.2472875340655	796.480022134931	2	399.2475891113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LPTPKGGK_	ENSG00000141101|ENST00000268802|NOB1	45.9519527083369	0.6193794311207887	2				NaN	NaN	0	NaN	8933	3842	12772
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12778	34.327	NaN	2952.3	30	0	942.44	0.035	+			497	ACDIIPQDE	9	65	502.2232344036662	1002.4319158741324	2	502.22369384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ACDIIPQDE_	ENSG00000140835|ENST00000539698|CHST4	29.14955571784316	0.5308295550522326	2				NaN	NaN	0	NaN	8934	3842	12772
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12779	34.328	NaN	1176.3	30	0	77.93	0.138			+	36808	SIEDLLAL	8	52	437.25136076074836	872.4881685882967	2	437.2520751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SIEDLLAL_	REV__ENSG00000101158|ENST00000652272|NELFCD;REV__ENST00000474543.5_1_20:57564608-57568882:+|nuORF;REV__nc|ENSG00000101158|Q8IXH7|NELFCD	62.97842346883844	0.4722955155785405	2				NaN	NaN	0	NaN	8935	3842	12772
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12790	34.355	NaN	12352	30	0	3009.5	0.214	+			36934	SILGTPLSK	9	63	458.2787921348285	914.543031336457	2	458.27899169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SILGTPLSK_	ENSG00000166912|ENST00000435680|MTMR10;ENST00000566338.5_1_15:31233675-31240771:-|nuORF;ENST00000567567.5_1_15:31233675-31258111:-|nuORF;MTMR10|p.L761*|1|0.4|ENSG00000166912|chr15:30941522-30941522|A/-|frameshift_variant	58.22992032128504	0.22837015374068087	2				NaN	NaN	0	NaN	8943	3845	12789
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12791	34.359	NaN	13414	30	0	5474.8	0.106				-1	QELKMPLF	8	78	524.280215319382	1046.545877705564	2	524.2849731445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))QELKMPLF_	ENSG00000172199|ENST00000302270|OR8U1;OR8U1|p.F31L|1|0.27|ENSG00000172199|chr11:56375716-56375716|C/A|missense_variant	71.37791200682192	0.3954169775488141	2				NaN	NaN	0	NaN	8944	3845	12789
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12792	34.36	NaN	29968	30	0	7337.4	0.106				-1	 	0	69	461.2551129871385	920.495673041077	2	461.25555419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8945	3845	12789
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12793	34.362	NaN	2301.2	30	0	352.45	0.106	+			49120	VVLNTVVYR	9	63	531.8182466137138	1061.6219402942274	2	531.8197631835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVLNTVVYR_	ENST00000417036.1_1_3:9405107-9405206:+|nuORF	87.69643885390035	0.07135982304947239	2				NaN	NaN	0	NaN	8946	3845	12789
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12794	34.364	NaN	2363.9	30	0	353.65	0.106	+			28745	NPADSISHVAY	11	66	587.2798059446803	1172.5450589561606	2	587.2803955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NPADSISHVAY_	ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;TRRAP-ASNS|1|fusion;TRRAP-ASNS|2|fusion;TRRAP|p.A1620Cfs*35|1|0.27|ENSG00000196367|chr7:98949499-98949500|-/G|frameshift_variant;TRRAP|p.K3443Sfs*19|1|0.28|ENSG00000196367|chr7:99004246-99004246|A/-|frameshift_variant;TRRAP|p.P1292Lfs*17|1|0.44|ENSG00000196367|chr7:98933258-98933258|C/-|frameshift_variant;TRRAP|p.P1360Afs*14|1|0.05|ENSG00000196367|chr7:98935641-98935642|-/GCAAATAA|frameshift_variant	80.45461616416974	0.1485828924062742	2				NaN	NaN	0	NaN	8947	3845	12789
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12795	34.366	NaN	3508.7	30	0	323.42	0.106	+			16408	HEQVVVQL	8	63	476.26613528766114	950.5177176421223	2	476.2658996582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HEQVVVQL_	ARHGEF40|p.A705Efs*26|1|0.07|ENSG00000165801|chr14:21078255-21078256|-/AGTTT|frameshift_variant;ARHGEF40|p.H1487Tfs*15|3|0.37|ENSG00000165801|chr14:21088033-21088033|C/-|frameshift_variant;ARHGEF40|p.P1111Lfs*5|2|0.26|ENSG00000165801|chr14:21082320-21082320|C/-|frameshift_variant;ARHGEF40|p.R1076Gfs*18|1|0.19|ENSG00000165801|chr14:21082089-21082089|C/-|frameshift_variant;ENSG00000165801|ENST00000298694|ARHGEF40;nc|ENSG00000165801|Q8TER5-3|ARHGEF40;nc|ENSG00000165801|Q8TER5-4|ARHGEF40	40.77816245573522	0.6514838689002179	2				NaN	NaN	0	NaN	8948	3845	12789
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12796	34.368	NaN	4788.8	30	0	1142.5	0.033	+			905	AEIDAHLV	8	62	434.2318744155069	866.4491958978139	2	434.2322998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AEIDAHLV_	ENSG00000100902|ENST00000261479|PSMA6;ENST00000400275.2_1_Y:15398697-15399255:+|nuORF;ENST00000554457.1_1_14:35786443-35786509:+|nuORF;nc|ENSG00000100902|P60900-2|PSMA6;nc|ENSG00000100902|P60900-3|PSMA6	76.84663266511073	0.3498490246073164	2				NaN	NaN	0	NaN	8949	3845	12789
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12808	34.393	NaN	6223.5	30	0	551.07	0.214	+			17551	IDVGDVILK	9	69	486.29235480675544	970.5701566803109	2	486.2935485839844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IDVGDVILK_	ENSG00000163629|ENST00000411767|PTPN13;nc|ENSG00000163629|Q12923-2|PTPN13;nc|ENSG00000163629|Q12923-3|PTPN13;nc|ENSG00000163629|Q12923-4|PTPN13;PTPN13|p.T2330Qfs*13|1|0.12|ENSG00000163629|chr4:86807799-86807799|A/-|frameshift_variant	56.72105179125745	0.24094814563026265	2				NaN	NaN	0	NaN	8958	3848	12807
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12809	34.397	NaN	2665.7	30	0	493.01	0.106	+			47343	VPDSSGPERIL	11	64	585.3112590285938	1168.6079651239875	2	585.3123168945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VPDSSGPERIL_	ENSG00000165119|ENST00000376263|HNRNPK;nc|ENSG00000165119|P61978-3|HNRNPK;nc|ENSG00000165119|P61978|HNRNPK	86.88156770896713	0.11154061753057586	2				NaN	NaN	0	NaN	8959	3848	12807
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12810	34.399	NaN	4459.6	30	0	934.01	0.106	+			5621	AVCSDFFNK	9	66	544.2468984478268	1086.4792439624534	2	544.2488403320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_AVC(Carbamidomethyl (C))SDFFNK_	ENSG00000164941|ENST00000523731|INTS8;ENST00000523352.1_1_8:95884148-95885795:+|nuORF;INTS8|p.V871M|1|0.36|ENSG00000164941|chr8:94873451-94873451|G/A|missense_variant;nc|ENSG00000164941|Q75QN2-2|INTS8	67.49366992349736	0.1516260258713357	2				NaN	NaN	0	NaN	8960	3848	12807
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12811	34.4	NaN	3836	30	0	993.38	0.106	+			11435	FLVIGSAG	8	44	382.22084924355545	762.4271455539109	2	382.2213134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FLVIGSAG_	ENSG00000167578|ENST00000357052|RAB4B;ENST00000597476.5_1_19:41285769-41292865:+|nuORF;ENST00000600078.5_1_19:41284205-41286153:+|nuORF;ENST00000602069.5_1_19:41284205-41289930:+|nuORF;nc|ENSG00000167578|P61018-2|RAB4B	54.76467175910256	0.5536104764165384	2				NaN	NaN	0	NaN	8961	3848	12807
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12812	34.402	NaN	2067.3	30	0	313.84	0.106			+	11980	FVPDFPTL	8	55	468.2453978420871	934.4762427509742	2	468.2455749511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FVPDFPTL_	REV__ENSG00000140093|ENST00000261994|SERPINA10	26.79610172149135	0.7524337208463756	2				NaN	NaN	0	NaN	8962	3848	12807
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12813	34.404	NaN	2717.6	30	0	275.64	0.036			+	30515	QAGLCVALLL	10	58	529.3065118934521	1056.5984708537042	2	529.3080444335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_QAGLC(Carbamidomethyl (C))VALLL_	REV__CHRNG|p.C252Vfs*58|1|0.29|ENSG00000196811|chr2:232543026-232543026|C/-|frameshift_variant;REV__ENSG00000196811|ENST00000651502|CHRNG;REV__nc|ENSG00000196811|P07510-2|CHRNG	63.30626980617807	0.33577009411590547	2				NaN	NaN	0	NaN	8963	3848	12807
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12814	34.405	NaN	1183.4	30	0	118.9	0.139			+	29	AAAKPSPLR	9	54	455.7770080566406	NaN	0	455.7770080566406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AAAKPSPLR_	REV__ENST00000558383.1_1_15:45392246-45393102:-|nuORF	21.9598887501803	0.3626577482100488	2				NaN	NaN	0	NaN	8964	3848	12807
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12828	34.436	NaN	16575	30	0	3546.4	0.214				-1	 	0	69	434.2863015544769	866.5580501757538	2	434.2867431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8975	3851	12827
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12829	34.44	NaN	19552	30	0	2237.8	0.106	+			41139	SVIVQPFSK	9	84	502.7918211145108	1003.5690892958216	2	502.7920837402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVIVQPFSK_	ENSG00000137871|ENST00000267807|ZNF280D;nc|ENSG00000285253|Q6N043-2|ZNF280D;nc|ENSG00000285253|Q6N043-3|ZNF280D;nc|ENSG00000285253|Q6N043-6|ZNF280D	65.15724298150197	0.17062369902793603	2				NaN	NaN	0	NaN	8976	3851	12827
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12830	34.442	NaN	9488.8	30	0	2444.6	0.106			+	30657	QAVGFPSVV	9	83	452.2502370246054	902.4859211160108	2	452.2503662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QAVGFPSVV_	REV__ENSG00000166341|ENST00000299441|DCHS1	56.72105179125745	0.24094814563026265	2				NaN	NaN	0	NaN	8977	3851	12827
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12831	34.444	NaN	7338.8	30	0	606.3	0.106				-1	RLLSQMDRGMI	11	78	445.90135111053394	1334.682223931802	3	445.9016418457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_RLLSQM(Oxidation (M))DRGMI_	PCDH7|p.D918Ifs*209|1|0.36|ENSG00000169851|chr4:30724168-30724168|A/-|frameshift_variant	44.639436926238396	0.4944613868569842	2				NaN	NaN	0	NaN	8978	3851	12827
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12832	34.445	NaN	9245.2	30	0	2843.9	0.106	+			38771	SSLYIILKK	9	52	355.56172269291216	1063.6633386789365	3	355.5620422363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSLYIILKK_	ENSG00000155561|ENST00000285968|NUP205	82.24051045832904	0.08786059719216216	2				NaN	NaN	0	NaN	8979	3851	12827
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12833	34.447	NaN	2731.8	30	0	255.7	0.036			+	28328	NEGAAALCLY	10	67	541.2527843991247	1080.4910158650493	2	541.2538452148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_NEGAAALC(Carbamidomethyl (C))LY_	REV__ENSG00000135912|ENST00000392102|TTLL4	65.80317337860623	0.313061058278602	2				NaN	NaN	0	NaN	8980	3851	12827
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12834	34.448	NaN	2871.6	30	0	205.48	0.139	+			8325	EAKIRSLF	8	62	482.2841152223715	962.553677511543	2	482.2845764160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EAKIRSLF_	ENSG00000146350|ENST00000398212|TBC1D32;ENST00000464622.5_1_6:121513684-121545514:-|nuORF;nc|ENSG00000146350|Q96NH3-4|TBC1D32;TBC1D32|p.F1022Sfs*5|1|0.3|ENSG00000146350|chr6:121113166-121113166|A/-|frameshift_variant;TBC1D32|p.L1005Ffs*9|1|0.37|ENSG00000146350|chr6:121115215-121115216|TT/-|frameshift_variant	58.78195531508484	0.5138399468736706	2				NaN	NaN	0	NaN	8981	3851	12827
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12845	34.475	NaN	53928	30	0	12426	0.214				-1	 	0	100	525.8126794619664	1049.6108059907326	2	525.8135375976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8989	3854	12844
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12846	34.478	NaN	3366.9	30	0	613.43	0.106				-1	 	0	65	489.26931946107766	488.26204299447767	1	489.27020263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8990	3854	12844
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12847	34.48	NaN	1695.9	30	0	165.06	0.106	+			43915	TPAEIREEF	9	68	546.2717895588137	1090.5290261844273	2	546.2724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TPAEIREEF_	ENSG00000007923|ENST00000377577|DNAJC11;ENST00000460594.5_1_1:6714320-6761860:-|nuORF;ENST00000485073.5_1_1:6713895-6761860:-|nuORF;nc|ENSG00000007923|Q9NVH1-2|DNAJC11;nc|ENSG00000007923|Q9NVH1-3|DNAJC11	36.446750945000026	0.4619375763483977	2				NaN	NaN	0	NaN	8991	3854	12844
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12848	34.482	NaN	5316.2	30	0	798.33	0.106			+	18262	IPDTREHS	8	66	477.73632497515194	953.4580970171039	2	477.7371826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IPDTREHS_	REV__ENSG00000196652|ENST00000326775|ZKSCAN5	30.503639358989545	0.7238069182250283	2				NaN	NaN	0	NaN	8992	3854	12844
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12849	34.484	NaN	2422.1	30	0	193.45	0.106			+	10697	EYVTIGAGIV	10	70	511.2817950433587	1020.5490371535175	2	511.2814025878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EYVTIGAGIV_	REV__ENSG00000007350|ENST00000369915|TKTL1;REV__ENST00000463884.1_1_X:153555730-153558035:+|nuORF;REV__nc|ENSG00000007350|P51854-1|TKTL1;REV__nc|ENSG00000007350|P51854-4|TKTL1	42.396135135203025	0.5270658956260207	2				NaN	NaN	0	NaN	8993	3854	12844
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12850	34.486	NaN	2450.1	30	0	185.67	0.106			+	27922	MVALIIKRE	9	59	536.8339825551803	NaN	0	536.833984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MVALIIKRE_	REV__ENSG00000176406|ENST00000696799|RIMS2;REV__nc|ENSG00000176406|Q9UQ26-2|RIMS2;REV__nc|ENSG00000176406|Q9UQ26-4|RIMS2;REV__nc|ENSG00000176406|Q9UQ26-5|RIMS2;REV__nc|ENSG00000176406|Q9UQ26-8|RIMS2;REV__nc|ENSG00000176406|Q9UQ26|RIMS2;REV__RIMS2|p.D126Vfs*29|1|0.12|ENSG00000176406|chr8:103885551-103885552|-/TCTTC|frameshift_variant;REV__RIMS2|p.G481Efs*3|1|0.44|ENSG00000176406|chr8:103915551-103915551|A/-|frameshift_variant;REV__RIMS2|p.M282Hfs*8|1|0.33|ENSG00000176406|chr8:103886018-103886019|-/C|frameshift_variant;REV__RIMS2|p.M282Wfs*5|2|0.34|ENSG00000176406|chr8:103886014-103886014|A/-|frameshift_variant	31.954861631926434	0.3162336699109506	2				NaN	NaN	0	NaN	8994	3854	12844
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12851	34.487	NaN	1619.3	30	0	190.84	0.037	+			29564	PFAMHPYPY	9	64	561.7591397519707	1121.5037265707413	2	561.758544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PFAMHPYPY_	ENSG00000171532|ENST00000302584|NEUROD2	39.021493756699265	0.43173687394350213	2				NaN	NaN	0	NaN	8995	3854	12844
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12864	34.515	NaN	9577.5	30	0	2036.1	0.214	+			8173	EAANTMVNY	9	61	506.72321360237623	1011.4318742715525	2	506.723876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EAANTMVNY_	ENSG00000011304|ENST00000356948|PTBP1;ENST00000586944.5_1_19:797434-805231:+|nuORF;nc|ENSG00000011304|P26599-1|PTBP1;nc|ENSG00000011304|P26599-2|PTBP1	138.06239232086	0.011389075116295402	2				NaN	NaN	0	NaN	9005	3857	12863
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12865	34.518	NaN	10735	30	0	2904.9	0.106			+	7015	CRVTISSGE	9	73	476.2316211176451	950.4486893020902	2	476.2319030761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_CRVTISSGE_	REV__ENST00000584351.5_1_9:22046821-22049161:+|nuORF	32.81241826257853	0.4965981579233955	2				NaN	NaN	0	NaN	9006	3857	12863
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12866	34.52	NaN	1346.3	30	0	119.35	0.106				-1	 	0	57	512.8126341737774	1023.6107154143548	2	512.813720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9007	3857	12863
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12867	34.522	NaN	2422.7	30	0	234.53	0.106	+			8167	EAALFGKV	8	61	417.73884444020695	833.4631359472139	2	417.73931884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EAALFGKV_	ENSG00000185046|ENST00000683438|ANKS1B;nc|ENSG00000185046|Q7Z6G8|ANKS1B	37.15910966729921	0.6739408393984688	2				NaN	NaN	0	NaN	9008	3857	12863
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12868	34.524	NaN	1437.2	30	0	135.26	0.106				-1	MPALWLGCCL	10	67	561.7591397519707	1121.5037265707413	2	561.7591552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_M(Oxidation (M))PALWLGCCL_	ENSG00000058085|ENST00000264144|LAMC2;LAMC2|p.V488Sfs*24|1|0.32|ENSG00000058085|chr1:183227688-183227688|G/-|frameshift_variant;nc|ENSG00000058085|Q13753-2|LAMC2	54.76467175910256	0.41345489472286195	2				NaN	NaN	0	NaN	9009	3857	12863
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12869	34.526	NaN	2260.8	30	0	153.93	0.106			+	-1	SVSPKPNGM	9	58	466.7269955460956	931.4394381589913	2	466.7270812988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_SVSPKPNGM(Oxidation (M))_	REV__ENSG00000030304|ENST00000374448|MUSK;REV__nc|ENSG00000030304|O15146-2|MUSK;REV__nc|ENSG00000030304|O15146-3|MUSK	27.882242232435846	0.5426732730940306	2				NaN	NaN	0	NaN	9010	3857	12863
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12870	34.528	NaN	765.52	30	0	353.78	0.036				-1	 	0	26	339.214530672972	1014.621762619116	3	339.21478271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9011	3857	12863
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12883	34.555	NaN	8048	30	0	931.7	0.214	+			25554	LPVVPKATY	9	70	494.2970941241615	986.579635315123	2	494.2975158691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LPVVPKATY_	ENSG00000179604|ENST00000335793|CDC42EP4;nc|ENSG00000179604|Q9H3Q1-2|CDC42EP4	82.24051045832904	0.08786059719216216	2				NaN	NaN	0	NaN	9021	3860	12882
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12884	34.558	NaN	6113.7	30	0	602.13	0.106	+			34027	RSLDNFFAK	9	70	549.2899317812534	1096.5653106293066	2	549.2911376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RSLDNFFAK_	ENSG00000091527|ENST00000264993|CDV3;nc|ENSG00000091527|Q9UKY7-2|CDV3	65.46538089061403	0.16805504838372562	2				NaN	NaN	0	NaN	9022	3860	12882
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12885	34.56	NaN	5407	30	0	683.13	0.106	+			18133	ILHGISETY	9	66	516.7714228337493	1031.5282927342985	2	516.7718505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ILHGISETY_	ENSG00000119285|ENST00000366582|HEATR1;HEATR1|p.H353Pfs*16|1|0.31|ENSG00000119285|chr1:236595572-236595573|-/G|frameshift_variant;HEATR1|p.M758Dfs*47|1|0.08|ENSG00000119285|chr1:236583167-236583168|-/G|frameshift_variant	45.9519527083369	0.35044536499095585	2				NaN	NaN	0	NaN	9023	3860	12882
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12886	34.562	NaN	3381	30	0	342.08	0.106	+			47457	VPVSTINHAF	10	65	542.7924959659592	1083.5704389987184	2	542.7935791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VPVSTINHAF_	ENSG00000147526|ENST00000317827|TACC1;ENST00000522955.5_1_8:38663104-38684943:+|nuORF;nc|ENSG00000147526|O75410-2|TACC1;nc|ENSG00000147526|O75410-3|TACC1;nc|ENSG00000147526|O75410-4|TACC1;nc|ENSG00000147526|O75410-5|TACC1;nc|ENSG00000147526|O75410-6|TACC1	79.71258880314673	0.19796908725841375	2				NaN	NaN	0	NaN	9024	3860	12882
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12887	34.564	NaN	4984.8	30	0	460.07	0.106			+	46418	VEQLELLK	8	71	486.29235480675544	970.5701566803109	2	486.2934875488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VEQLELLK_	REV__ENSG00000132470|ENST00000200181|ITGB4;REV__ITGB4|p.A1304Pfs*140|1|0.27|ENSG00000132470|chr17:75752287-75752287|G/-|frameshift_variant;REV__ITGB4|p.P1123Lfs*37|1|0.47|ENSG00000132470|chr17:75750158-75750158|C/-|frameshift_variant;REV__ITGB4|p.T1720Rfs*13|1|0.05|ENSG00000132470|chr17:75757046-75757052|GACCACT/-|frameshift_variant;REV__nc|ENSG00000132470|P16144-2|ITGB4;REV__nc|ENSG00000132470|P16144-3|ITGB4;REV__nc|ENSG00000132470|P16144-4|ITGB4	51.19269402634007	0.5868595481438337	2				NaN	NaN	0	NaN	9025	3860	12882
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12888	34.566	NaN	4691.1	30	0	1268.5	0.039	+			4477	ATIRVLEAIQK	11	60	414.5900687364883	1240.748376809665	3	414.5907897949219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATIRVLEAIQK_	ENSG00000169375|ENST00000394947|SIN3A;SIN3A|p.G659Afs*26|1|0.14|ENSG00000169375|chr15:75396375-75396375|C/-|frameshift_variant	88.1336951990783	0.1064147647397003	2				NaN	NaN	0	NaN	9026	3860	12882
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12889	34.566	NaN	1835.6	30	0	167.54	0.138			+	40851	SVFAARMQ	8	51	455.23348253234315	908.4524121314863	2	455.2340087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVFAARMQ_	REV__ENSG00000005884|ENST00000320031|ITGA3;REV__ENST00000505306.5_1_17:48133647-48154208:+|nuORF;REV__nc|ENSG00000005884|P26006-1|ITGA3	42.47446043378293	0.6409579893742323	2				NaN	NaN	0	NaN	9027	3860	12882
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12900	34.593	NaN	2320.5	30	0	178.57	0.214			+	37656	SLQTAAALL	9	53	444.2629604276299	886.5113679220598	2	444.26324462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLQTAAALL_	REV__ENSG00000163710|ENST00000295992|PCOLCE2;REV__ENST00000461818.5_1_3:142583306-142607807:-|nuORF;REV__ENST00000483454.1_1_3:142606498-142607765:-|nuORF;REV__ENST00000495732.5_1_3:142565552-142607807:-|nuORF;REV__PCOLCE2|p.I390Tfs*8|1|0.26|ENSG00000163710|chr3:142818414-142818414|A/-|frameshift_variant;REV__PCOLCE2|p.N190Efs*9|1|0.33|ENSG00000163710|chr3:142842933-142842934|-/G|frameshift_variant	76.7741389293348	0.11149722112137898	2				NaN	NaN	0	NaN	9035	3863	12899
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12901	34.597	NaN	2626.6	30	0	227.25	0.106	+			28845	NPVDWKEQY	9	65	589.7770663184857	1177.5395797037713	2	589.7769775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NPVDWKEQY_	ENSG00000106397|ENST00000223127|PLOD3;ENST00000460132.5_1_7:100853286-100853899:-|nuORF	129.42129120953632	0.01549634589885217	2				NaN	NaN	0	NaN	9036	3863	12899
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12902	34.599	NaN	2115.7	30	0	243.72	0.106	+			10159	ESTTFHSW	8	57	497.7179363179612	993.4213197027224	2	497.7179260253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ESTTFHSW_	ENSG00000205277|ENST00000536621|MUC12;nc|ENSG00000205277|Q9UKN1|MUC12	40.5726180659479	0.6527593143185008	2				NaN	NaN	0	NaN	9037	3863	12899
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12903	34.601	NaN	5303.9	30	0	581.91	0.106			+	-1	TPLTMSFGS	9	74	478.7225220913272	955.4304912494545	2	478.7219543457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_TPLTM(Oxidation (M))SFGS_	REV__ENSG00000275066|ENST00000612223|SYNRG;REV__nc|ENSG00000275066|Q9UMZ2-3|SYNRG;REV__nc|ENSG00000275066|Q9UMZ2-4|SYNRG;REV__nc|ENSG00000275066|Q9UMZ2-5|SYNRG;REV__nc|ENSG00000275066|Q9UMZ2-7|SYNRG;REV__nc|ENSG00000275066|Q9UMZ2-8|SYNRG;REV__nc|ENSG00000275066|Q9UMZ2-9|SYNRG;REV__SYNRG|p.N610Tfs*3|2|0.33|ENSG00000275066|chr17:37553894-37553894|T/-|frameshift_variant	38.80614096846853	0.43426287593479557	2				NaN	NaN	0	NaN	9038	3863	12899
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12904	34.603	NaN	1198.1	30	0	131.12	0.106				-1	QCQEWLSR	8	52	553.7549972701644	NaN	0	553.7555541992188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_QC(Carbamidomethyl (C))QEWLSR_	ENSG00000108389|ENST00000682306|MTMR4;ENST00000580983.1_1_17:56585520-56588860:-|nuORF;ENST00000583966.1_1_17:56585827-56586213:-|nuORF;MTMR4|p.F1143Lfs*14|1|0.15|ENSG00000108389|chr17:58491822-58491823|-/T|frameshift_variant;MTMR4|p.Q191Pfs*11|1|0.38|ENSG00000108389|chr17:58508254-58508255|-/G|frameshift_variant;nc|ENSG00000108389|Q9NYA4|MTMR4	32.81241826257853	1.7418937515398478	2				NaN	NaN	0	NaN	9039	3863	12899
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12905	34.604	NaN	1564.1	30	0	598.56	0.045	+			33843	RRELWFWWRGW	11	54	559.9546508789062	NaN	0	559.9546508789062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RRELWFWWRGW_	ENST00000246635.7_1_17:39661629-39661743:-|nuORF	1.3219263287936662	0.456735970842152	2				NaN	NaN	0	NaN	9040	3863	12899
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12906	34.605	NaN	1566.6	30	0	105.88	0.142	+			42163	SYTGFRYLM	9	61	569.2753295898438	NaN	0	569.2753295898438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SYTGFRYLM_	ENST00000231509.7_1_5:142675048-142675096:-|nuORF	29.14955571784316	0.3303970763161698	2				NaN	NaN	0	NaN	9041	3863	12899
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12919	34.634	NaN	21569	30	0	1925.5	0.214				-1	 	0	80	502.7554994570573	1003.4964459809146	2	502.7559509277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9051	3866	12918
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12920	34.638	NaN	15284	30	0	7022.9	0.106	+			32233	QTFLLQTTK	9	76	540.307897786178	1078.601242639156	2	540.3089599609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QTFLLQTTK_	ENSG00000149480|ENST00000278823|MTA2;MTA2|p.A568Qfs*29|1|0.23|ENSG00000149480|chr11:62594402-62594402|T/-|frameshift_variant;MTA2|p.I556Hfs*8|1|0.29|ENSG00000149480|chr11:62594543-62594544|-/C|frameshift_variant;nc|ENSG00000149480|O94776-2|MTA2	68.84614121027924	0.14577793175421136	2				NaN	NaN	0	NaN	9052	3866	12918
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12921	34.64	NaN	2489.6	30	0	307.26	0.106			+	26043	LSLKGEIP	8	53	428.76055724390454	855.5065615546091	2	428.7604675292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSLKGEIP_	REV__ENSG00000122970|ENST00000242591|IFT81;REV__ENST00000549009.1_1_12:110574622-110600787:+|nuORF;REV__IFT81|p.L493Tfs*7|1|0.42|ENSG00000122970|chr12:110192619-110192620|-/A|frameshift_variant;REV__nc|ENSG00000122970|Q8WYA0-3|IFT81	74.25504064058377	0.37144338840759816	2				NaN	NaN	0	NaN	9053	3866	12918
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12922	34.642	NaN	3187.1	30	0	211.97	0.106	+			8389	EANAIALKY	9	58	496.77381802763944	991.5330831220789	2	496.7740173339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EANAIALKY_	ENSG00000123473|ENST00000371877|STIL;nc|ENSG00000123473|Q15468|STIL	90.77665401227738	0.06267569666681755	2				NaN	NaN	0	NaN	9054	3866	12918
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12923	34.643	NaN	2718.1	30	0	254.33	0.106	+			22303	KTEQLNRF	8	66	518.2841627013906	1034.5537724695812	2	518.2850952148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KTEQLNRF_	ENST00000508781.5_1_5:110073914-110092698:+|nuORF	35.61828744233558	0.6843154725607303	2				NaN	NaN	0	NaN	9055	3866	12918
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12924	34.645	NaN	4948.2	30	0	362.92	0.034			+	13884	GRASRAALVA	10	61	486.29235480675544	970.5701566803109	2	486.29315185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GRASRAALVA_	REV__ENSG00000162976|ENST00000295083|SLC66A3;REV__nc|ENSG00000162976|Q8N755-2|SLC66A3	45.97224482568171	0.49411383603842696	2				NaN	NaN	0	NaN	9056	3866	12918
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12925	34.646	NaN	3140.4	30	0	208.32	0.139			+	17893	IGEALGYPL	9	60	466.75730958743713	931.5000662416743	2	467.25689697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IGEALGYPL_	REV__ENSG00000197818|ENST00000361573|SLC9A8;REV__nc|ENSG00000197818|Q9Y2E8-2|SLC9A8;REV__SLC9A8|p.P341Qfs*46|1|0.09|ENSG00000197818|chr20:49874765-49874765|C/-|frameshift_variant	20.481830146152948	0.6112419832031293	2				NaN	NaN	0	NaN	9057	3866	12918
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12937	34.673	NaN	15424	30	0	2256.2	0.214	+			6760	CEEMKATVI	9	69	512.245194196328	1022.4758354594561	2	512.2462158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CEEMKATVI_	CON__O43790;CON__P78385;CON__P78386;CON__Q14533;CON__Q61726;CON__Q6NT21;ENSG00000135443|ENST00000257901|KRT85;ENSG00000170442|ENST00000423955|KRT86;ENSG00000170523|ENST00000293670|KRT83;ENSG00000205426|ENST00000327741|KRT81;nc|ENSG00000290966|A6NCN2|KRT87P	95.81516180277367	0.04847050768394289	2				NaN	NaN	0	NaN	9066	3869	12936
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12938	34.677	NaN	13699	30	0	1359.3	0.106				-1	 	0	78	477.80208865384805	953.5896243744961	2	477.802490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9067	3869	12936
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12939	34.679	NaN	3963.3	30	0	362.21	0.106	+			27999	MVVEERCVY	9	65	564.2632243771338	1126.5118958210676	2	564.2650756835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MVVEERCVY_	ENSG00000169230|ENST00000303204|PRELID1;ENST00000511309.5_1_5:176730986-176733129:+|nuORF;ENST00000567272.1_1_6:126964989-126965184:+|nuORF;nc|ENSG00000169230|Q9Y255-2|PRELID1	56.72105179125745	0.24094814563026265	2				NaN	NaN	0	NaN	9068	3869	12936
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12940	34.68	NaN	3998.4	30	0	391.97	0.106			+	28915	NQTNLFPK	8	71	481.2594350429521	960.5043171527042	2	481.2597351074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NQTNLFPK_	REV__ENSG00000149256|ENST00000278550|TENM4;REV__TENM4|p.R2689Gfs*41|1|0.3|ENSG00000149256|chr11:78658303-78658303|G/-|frameshift_variant	74.25504064058377	0.37144338840759816	2				NaN	NaN	0	NaN	9069	3869	12936
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12941	34.682	NaN	3399.7	30	0	330.47	0.106	+			25555	LPVVPKATY	9	66	494.2970941241615	986.579635315123	2	494.29736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LPVVPKATY_	ENSG00000179604|ENST00000335793|CDC42EP4;nc|ENSG00000179604|Q9H3Q1-2|CDC42EP4	37.15910966729921	0.4535818937225704	2				NaN	NaN	0	NaN	9070	3869	12936
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12942	34.684	NaN	6679.1	30	0	4493.3	0.037	+			35060	SAFDRILSSK	10	49	375.20791598659105	1122.6019185599732	3	375.20849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SAFDRILSSK_	ENSG00000141959|ENST00000349048|PFKL;ENST00000397961.6_1_21:45725201-45746742:+|nuORF;ENST00000466134.5_1_21:45735979-45739299:+|nuORF;nc|ENSG00000141959|P17858-2|PFKL;PFKL|p.P704Qfs*6|1|0.29|ENSG00000141959|chr21:44326177-44326177|C/-|frameshift_variant	55.08391021199286	0.41055145962533396	2				NaN	NaN	0	NaN	9071	3869	12936
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12943	34.685	NaN	2029.8	30	0	384.01	0.139			+	44462	TSPQALVQP	9	59	470.7581357943859	939.5017186555718	2	470.75823974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TSPQALVQP_	REV__ENSG00000183765|ENST00000404276|CHEK2;REV__ENST00000472807.1_1_22:29083887-29085224:-|nuORF;REV__nc|ENSG00000183765|O96017-11|CHEK2;REV__nc|ENSG00000183765|O96017-12|CHEK2;REV__nc|ENSG00000183765|O96017-13|CHEK2;REV__nc|ENSG00000183765|O96017-3|CHEK2;REV__nc|ENSG00000183765|O96017-4|CHEK2;REV__nc|ENSG00000183765|O96017-9|CHEK2	38.80614096846853	0.43426287593479557	2				NaN	NaN	0	NaN	9072	3869	12936
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12955	34.712	NaN	15918	30	0	2666	0.214	+			47849	VSLDYAISK	9	81	498.27335500899665	994.5321570847933	2	498.2736511230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSLDYAISK_	ENSG00000181220|ENST00000458143|ZNF746;ENSG00000204946|ENST00000434415|ZNF783;ENST00000472212.5_1_7:149248897-149318218:-|nuORF;ENST00000481762.5_1_7:149260692-149318218:-|nuORF;ENST00000486492.5_1_7:149255763-149318218:-|nuORF;ENST00000493198.5_1_7:149316940-149318218:-|nuORF;nc|ENSG00000181220|Q6NUN9-2|ZNF746;nc|ENSG00000181220|Q6NUN9|ZNF746;nc|ENSG00000204946|Q6ZMS7-1|ZNF783	134.7655990226056	0.012935733000282069	2				NaN	NaN	0	NaN	9081	3872	12954
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12956	34.716	NaN	10557	30	0	952.52	0.106	+			35832	SEDDVKMAL	9	77	504.2384668466005	1006.462380760001	2	504.23883056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEDDVKMAL_	ENSG00000169813|ENST00000682386|HNRNPF	115.49404669440601	0.023927554121326553	2				NaN	NaN	0	NaN	9082	3872	12954
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12957	34.718	NaN	26969	30	0	3560.5	0.106	+			28848	NPVEDKDAVAF	11	85	602.795559216507	1203.5765654998138	2	602.7958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NPVEDKDAVAF_	CEACAM6|p.I217Mfs*11|3|0.07|ENSG00000086548|chr19:41761474-41761475|-/G|frameshift_variant;ENSG00000079385|ENST00000161559|CEACAM1;ENSG00000086548|ENST00000199764|CEACAM6;ENSG00000124469|ENST00000244336|CEACAM8;ENST00000344391.9_1_19:43023158-43032553:-|nuORF;ENST00000377806.7_1_19:43023094-43032607:-|nuORF;ENST00000403136.1_1_19:43025413-43032607:-|nuORF;nc|ENSG00000079385|P13688-10|CEACAM1;nc|ENSG00000079385|P13688-11|CEACAM1;nc|ENSG00000079385|P13688-2|CEACAM1;nc|ENSG00000079385|P13688-3|CEACAM1;nc|ENSG00000079385|P13688-4|CEACAM1;nc|ENSG00000079385|P13688-5|CEACAM1;nc|ENSG00000079385|P13688-6|CEACAM1;nc|ENSG00000079385|P13688-8|CEACAM1;nc|ENSG00000079385|P13688-9|CEACAM1	125.68205650279488	0.009258456973060042	2				NaN	NaN	0	NaN	9083	3872	12954
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12958	34.719	NaN	6826.8	30	0	2913.7	0.106	+			8260	EAGIKGAVAL	10	64	464.775859749692	927.537166566184	2	464.77630615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EAGIKGAVAL_	tr|U7SRP2|U7SRP2_FUSNUGlucokinaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01608PE=4SV=1	74.25504064058377	0.24255678544297835	2				NaN	NaN	0	NaN	9084	3872	12954
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12959	34.721	NaN	4886.2	30	0	847.81	0.106	+			49255	VVNVSPYLK	9	69	509.7997141654973	1017.5848753977946	2	509.80035400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVNVSPYLK_	ENSG00000167861|ENST00000425042|HID1;HID1|p.P773Lfs*8|1|0.17|ENSG00000167861|chr17:74951619-74951619|G/-|frameshift_variant;nc|ENSG00000167861|Q8IV36-2|HID1;nc|ENSG00000167861|Q8IV36-3|HID1	96.66504779109242	0.04607440320619715	2				NaN	NaN	0	NaN	9085	3872	12954
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12960	34.723	NaN	2779	30	0	661.7	0.106				-1	 	0	58	461.2551129871385	920.495673041077	2	461.25537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9086	3872	12954
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12961	34.725	NaN	6027.5	30	0	1357	0.036				-1	 	0	70	532.744149644226	1063.473746355252	2	532.7454833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9087	3872	12954
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12975	34.754	NaN	11830	30	0	4007.5	0.214				-1	 	0	55	394.7037972933802	787.3930416535604	2	394.70416259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9098	3875	12974
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12976	34.758	NaN	8270.6	30	0	1393.4	0.106	+			5157	ATSVVSFVR	9	69	483.2728938341971	964.5312347351942	2	483.2739562988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATSVVSFVR_	ENSG00000162817|ENST00000294889|C1orf115	112.41091882917199	0.026537921851008135	2				NaN	NaN	0	NaN	9099	3875	12974
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12977	34.76	NaN	3761.6	30	0	792.51	0.106	+			16605	HGLVEVASY	9	70	487.7507666325682	973.4869803319364	2	487.7503356933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HGLVEVASY_	ENSG00000099860|ENST00000215631|GADD45B;ENST00000592937.1_1_19:2477233-2477596:+|nuORF	55.50420428727701	0.2510918378945873	2				NaN	NaN	0	NaN	9100	3875	12974
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12978	34.762	NaN	3119.6	30	0	329.29	0.106	+			7832	DPVVADYKY	9	63	535.2621410862699	1068.5097292393398	2	535.263916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DPVVADYKY_	ENSG00000132170|ENST00000651735|PPARG;ENST00000477039.5_1_3:12393091-12447643:+|nuORF;nc|ENSG00000132170|P37231-2|PPARG;nc|ENSG00000132170|P37231-3|PPARG;nc|ENSG00000132170|P37231|PPARG;PPARG|p.L298Cfs*38|1|0.26|ENSG00000132170|chr3:12416771-12416771|C/-|frameshift_variant;PPARG|p.S186Vfs*47|1|0.08|ENSG00000132170|chr3:12392683-12392683|A/-|frameshift_variant	89.02883481214508	0.06760336634167786	2				NaN	NaN	0	NaN	9101	3875	12974
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12979	34.764	NaN	3483.2	30	0	216.38	0.106	+			33248	RGCGLLWVF	9	76	525.7818226823509	1049.5490924315018	2	525.7828979492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RGCGLLWVF_	ENST00000328300.10_2_X:107683240-107783007:+|nuORF	42.47446043378293	0.39123495718708534	2				NaN	NaN	0	NaN	9102	3875	12974
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12980	34.765	NaN	2447.8	30	0	519.89	0.037			+	-1	LMISSAMILI	10	43	369.8764907465362	1106.6076428398087	3	369.87652587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_LM(Oxidation (M))ISSAMILI_	REV__ENSG00000152207|ENST00000682523|CYSLTR2	31.529811441608018	0.6223461015008678	2				NaN	NaN	0	NaN	9103	3875	12974
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12981	34.766	NaN	3564.5	30	0	729.35	0.14			+	27471	MLRDRLIN	8	66	515.7937564351159	1029.5729599370318	2	515.291748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MLRDRLIN_	REV__tr|U7STF6|U7STF6_FUSNUIntegrase/recombinaseXerDOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01467PE=4SV=1	57.81127852772723	0.5234495074909924	2				NaN	NaN	0	NaN	9104	3875	12974
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12993	34.793	NaN	28372	30	0	6440.6	0.214			+	-1	KEQMLAEK	8	84	496.7570965016352	991.4996400700704	2	498.25579833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_KEQM(Oxidation (M))LAEK_	REV__ENSG00000166813|ENST00000394412|KIF7;REV__KIF7|p.R1260Afs*16|2|0.28|ENSG00000166813|chr15:89628673-89628673|G/-|frameshift_variant	45.97224482568171	0.6192535143389125	2				NaN	NaN	0	NaN	9113	3878	12992
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12994	34.797	NaN	3734.8	30	0	558.22	0.106			+	24452	LGFDALKVA	9	61	467.27286500446917	932.5311770757384	2	467.2735900878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LGFDALKVA_	REV__CAMK2A|p.N321Kfs*21|1|0.14|ENSG00000070808|chr5:150245185-150245186|-/C|frameshift_variant;REV__ENSG00000058404|ENST00000395749|CAMK2B;REV__ENSG00000070808|ENST00000671881|CAMK2A;REV__ENSG00000145349|ENST00000511664|CAMK2D;REV__ENSG00000148660|ENST00000423381|CAMK2G;REV__ENST00000472912.5_1_10:75578585-75620616:-|nuORF;REV__ENST00000497584.5_1_7:44259663-44373862:-|nuORF;REV__ENST00000508662.5_1_5:149618053-149669203:-|nuORF;REV__ENST00000523845.5_1_7:44260423-44302632:-|nuORF;REV__nc|ENSG00000058404|Q13554-2|CAMK2B;REV__nc|ENSG00000058404|Q13554-3|CAMK2B;REV__nc|ENSG00000058404|Q13554-4|CAMK2B;REV__nc|ENSG00000058404|Q13554-5|CAMK2B;REV__nc|ENSG00000058404|Q13554-6|CAMK2B;REV__nc|ENSG00000058404|Q13554-7|CAMK2B;REV__nc|ENSG00000058404|Q13554-8|CAMK2B;REV__nc|ENSG00000070808|Q9UQM7|CAMK2A;REV__nc|ENSG00000145349|Q13557-10|CAMK2D;REV__nc|ENSG00000145349|Q13557-11|CAMK2D;REV__nc|ENSG00000145349|Q13557-12|CAMK2D;REV__nc|ENSG00000145349|Q13557-3|CAMK2D;REV__nc|ENSG00000145349|Q13557-4|CAMK2D;REV__nc|ENSG00000145349|Q13557-5|CAMK2D;REV__nc|ENSG00000145349|Q13557-6|CAMK2D;REV__nc|ENSG00000145349|Q13557-8|CAMK2D;REV__nc|ENSG00000145349|Q13557-9|CAMK2D;REV__nc|ENSG00000145349|Q13557|CAMK2D;REV__nc|ENSG00000148660|Q13555-10|CAMK2G;REV__nc|ENSG00000148660|Q13555-11|CAMK2G;REV__nc|ENSG00000148660|Q13555-2|CAMK2G;REV__nc|ENSG00000148660|Q13555-3|CAMK2G;REV__nc|ENSG00000148660|Q13555-4|CAMK2G;REV__nc|ENSG00000148660|Q13555-5|CAMK2G;REV__nc|ENSG00000148660|Q13555-6|CAMK2G;REV__nc|ENSG00000148660|Q13555-7|CAMK2G;REV__nc|ENSG00000148660|Q13555-8|CAMK2G;REV__nc|ENSG00000148660|Q13555-9|CAMK2G;REV__nc|ENSG00000148660|Q13555|CAMK2G	47.91560031466742	0.327412564698279	2				NaN	NaN	0	NaN	9114	3878	12992
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12995	34.799	NaN	2877.4	30	0	393.94	0.106	+			24114	LEKPLNLV	8	49	463.2888906712811	924.5632284093622	2	463.2894592285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LEKPLNLV_	ENSG00000198829|ENST00000362032|SUCNR1	44.116797842482775	0.6307669463330267	2				NaN	NaN	0	NaN	9115	3878	12992
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12996	34.801	NaN	2498.1	30	0	304.72	0.106	+			13275	GIVECLGPK	9	53	458.25098296172627	914.4874129902526	2	458.2516784667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GIVECLGPK_	ENSG00000142230|ENST00000270225|SAE1	76.7741389293348	0.11149722112137898	2				NaN	NaN	0	NaN	9116	3878	12992
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12997	34.803	NaN	3144.7	30	0	328.98	0.106			+	-1	FAKGCHLQPC	10	54	406.52382984834054	1216.5496601452217	3	406.5245666503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C)	_FAKGC(Carbamidomethyl (C))HLQPC(Carbamidomethyl (C))_	REV__ENSG00000126003|ENST00000246229|PLAGL2	29.170058357718403	0.6416167986984785	2				NaN	NaN	0	NaN	9117	3878	12992
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12998	34.804	NaN	2315.2	30	0	291.09	0.037				-1	 	0	62	564.3365168380542	1126.6584807429083	2	564.3375854492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9118	3878	12992
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12999	34.805	NaN	2562.7	30	0	394.54	0.14	+			29774	PIEGWAVVY	9	65	517.2698745013496	NaN	0	517.2696533203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PIEGWAVVY_	ENSG00000148358|ENST00000347136|GPR107;ENST00000493417.5_1_9:132839594-132891041:+|nuORF;nc|ENSG00000148358|Q5VW38|GPR107	40.5726180659479	0.27166212580479165	2				NaN	NaN	0	NaN	9119	3878	12992
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13011	34.832	NaN	315540	30	0	97026	0.147	+			4237	ATGDMSGLLK	10	91	496.7570965016352	991.4996400700704	2	496.7579345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATGDMSGLLK_	ENSG00000127837|ENST00000248450|AAMP;ENST00000475678.5_1_2:219131145-219134809:-|nuORF;ENST00000489767.5_1_2:219130391-219134818:-|nuORF	186.41076107051632	0.0005942356675692456	2				NaN	NaN	0	NaN	9128	3881	13010
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13012	34.835	NaN	14897	30	0	3692.3	0.106				-1	 	0	74	533.7916767482045	1065.568800563209	2	533.7927856445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9129	3881	13010
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13013	34.837	NaN	9077.1	30	0	1377.1	0.106			+	8730	EEEQSKTKT	9	77	540.2646930487505	1078.5148331643009	2	540.7647094726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EEEQSKTKT_	REV__ENSG00000165972|ENST00000344280|CCDC38	42.86426827375447	0.38666266728046506	2				NaN	NaN	0	NaN	9130	3881	13010
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13014	34.838	NaN	7054.9	30	0	1131.8	0.106	+			41928	SVVNSFIEK	9	71	511.7784817168717	1021.5424105005434	2	511.77972412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVVNSFIEK_	ENSG00000136159|ENST00000258662|NUDT15;NUDT15|p.N117Mfs*25|1|0.37|ENSG00000136159|chr13:48041105-48041105|A/-|frameshift_variant	91.26522074875469	0.06129826844580791	2				NaN	NaN	0	NaN	9131	3881	13010
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13015	34.84	NaN	6121.3	30	0	1324.5	0.106				-1	 	0	59	436.7574530124784	871.5003530917568	2	436.7577209472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9132	3881	13010
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13016	34.842	NaN	4257.3	30	0	323.25	0.106	+			11499	FPDKPITQY	9	67	554.7868170656611	1107.5590811981222	2	554.78759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FPDKPITQY_	ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656-2|DDOST;nc|ENSG00000244038|P39656-3|DDOST;nc|ENSG00000244038|P39656|DDOST	83.6470233535746	0.08277643980271215	2				NaN	NaN	0	NaN	9133	3881	13010
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13017	34.844	NaN	2279.7	30	0	902.88	0.036	+			32442	QVILVQPYK	9	61	544.3291721238716	NaN	0	544.3289184570312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QVILVQPYK_	ENST00000370798.5_1_1:78107309-78149041:-|nuORF;ENST00000370801.7_1_1:78107309-78148295:-|nuORF	44.116797842482775	0.2472372736944149	2				NaN	NaN	0	NaN	9134	3881	13010
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13028	34.868	NaN	5015	30	0	613.67	0.214	+			16742	HLPGVRQR	8	66	481.7849270892485	961.5553012452971	2	481.78668212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HLPGVRQR_	ENSG00000165861|ENST00000556143|ZFYVE1;nc|ENSG00000165861|Q9HBF4-3|ZFYVE1	35.200714571348534	0.6875396545722289	2				NaN	NaN	0	NaN	9142	3884	13027
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13029	34.872	NaN	9581.4	30	0	2622.4	0.106				-1	 	0	73	526.7791028375767	1051.5436527419533	2	526.780517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9143	3884	13027
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13030	34.874	NaN	4075.4	30	0	493.05	0.035	+			8310	EAISQSTQF	9	64	505.74260117408426	1009.4706494149685	2	505.74432373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EAISQSTQF_	DST|p.K5076Nfs*24|1|0.31|ENSG00000151914|chr6:56472218-56472218|T/-|frameshift_variant;DST|p.T4428Nfs*23|1|0.12|ENSG00000151914|chr6:56497896-56497897|-/T|frameshift_variant;ENSG00000151914|ENST00000680361|DST;nc|ENSG00000151914|Q03001-14|DST;nc|ENSG00000151914|Q03001-8|DST;nc|ENSG00000151914|Q03001|DST	70.8162118820467	0.13725933411854815	2				NaN	NaN	0	NaN	9144	3884	13027
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13041	34.899	NaN	5465.3	30	0	569.32	0.214	+			46312	VEKGFTPSL	9	65	489.26818283881875	976.5218127444375	2	489.2685852050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VEKGFTPSL_	ENSG00000197142|ENST00000354655|ACSL5;ENST00000495539.5_1_10:114169305-114171667:+|nuORF;nc|ENSG00000197142|Q9ULC5-3|ACSL5;nc|ENSG00000197142|Q9ULC5-4|ACSL5	70.39856735676683	0.13906523160059378	2				NaN	NaN	0	NaN	9152	3887	13040
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13042	34.902	NaN	4860.7	30	0	681.28	0.106	+			34611	RVPPEFLVQ	9	72	542.8103727080546	1083.6061924829091	2	542.8111572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RVPPEFLVQ_	ENSG00000115275|ENST00000448666|MOGS;ENST00000462189.1_1_2:74688404-74690534:-|nuORF;MOGS|p.P513Qfs*7|1|0.57|ENSG00000115275|chr2:74462251-74462251|G/-|frameshift_variant;MOGS|p.Y749Tfs*44|1|0.51|ENSG00000115275|chr2:74461545-74461545|G/-|frameshift_variant;nc|ENSG00000115275|Q13724-2|MOGS	59.93077597824379	0.21419174904018318	2				NaN	NaN	0	NaN	9153	3887	13040
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13043	34.904	NaN	4368.6	30	0	1376.9	0.106	+			23681	LASRAVDSLMK	11	44	397.5567154272365	1189.6483168819095	3	397.5570068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LASRAVDSLMK_	ENST00000340648.5_1_21:45114371-45114962:+|nuORF	27.64392233501311	0.6998289966465058	2				NaN	NaN	0	NaN	9154	3887	13040
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13044	34.906	NaN	5826.2	30	0	959.94	0.106	+			36480	SEVTAALRV	9	65	473.27141775316386	944.5282825731277	2	473.2712707519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SEVTAALRV_	EEF2|p.E241Rfs*13|1|0.26|ENSG00000167658|chr19:3982316-3982316|C/-|frameshift_variant;ENSG00000167658|ENST00000309311|EEF2	93.1432384553994	0.056003526918089595	2				NaN	NaN	0	NaN	9155	3887	13040
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13045	34.908	NaN	3994.2	30	0	911.3	0.106			+	-1	KLCSPVYCR	9	65	563.2809682518607	1124.5473835705213	2	563.7836303710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_KLC(Carbamidomethyl (C))SPVYCR_	REV__ENSG00000115998|ENST00000264434|C2orf42	39.252832667884924	0.4290233611298554	2				NaN	NaN	0	NaN	9156	3887	13040
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13046	34.91	NaN	4156.4	30	0	429.68	0.044			+	11246	FILFLRRFWWR	11	69	547.3169572375388	1638.9290423128161	3	547.6520385742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FILFLRRFWWR_	REV__ENST00000281830.3_1_2:223918801-223918864:+|nuORF	1.5229847967890655	0.8889384911710808	2				NaN	NaN	0	NaN	9157	3887	13040
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13059	34.937	NaN	10280	30	0	1036.6	0.214			+	26786	LVRSGCGPAL	10	73	486.7675772062719	971.5206014793438	2	486.76800537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LVRSGCGPAL_	REV__ENST00000368192.8_1_1:157095491-157095569:-|nuORF	69.6276240434122	0.2803623802747859	2				NaN	NaN	0	NaN	9167	3890	13058
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13060	34.941	NaN	6050.5	30	0	1553.2	0.106	+			30655	QAVECAAFLQ	10	74	540.2646930487505	1078.5148331643009	2	540.2671508789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QAVECAAFLQ_	ENSG00000234438|ENST00000432196|KBTBD13	56.43379154798735	0.3982744522255666	2				NaN	NaN	0	NaN	9168	3890	13058
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13061	34.943	NaN	2778.6	30	0	336.08	0.106	+			43443	TGLSIHLGPA	10	63	483.2728938341971	964.5312347351942	2	483.2686462402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TGLSIHLGPA_	SAMD1|p.R402H|1|0.46|ENSG00000141858|chr19:14088511-14088511|C/T|missense_variant	44.116797842482775	0.5112108506279902	2				NaN	NaN	0	NaN	9169	3890	13058
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13062	34.944	NaN	4225.4	30	0	741.6	0.106	+			38510	SSCFLSVTPG	10	69	499.2378225988726	996.4610922645452	2	499.2379455566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSCFLSVTPG_	ENST00000229179.8_1_12:69114940-69115675:+|nuORF	49.44154591367651	0.46214596422418036	2				NaN	NaN	0	NaN	9170	3890	13058
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13063	34.946	NaN	1864.2	30	0	112.93	0.106	+			49086	VVLAGACCLR	10	67	502.7741874510998	1003.5338219689996	2	502.7930908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVLAGACCLR_	ENST00000553520.1_1_14:39735777-39736195:-|nuORF	53.351449002276354	0.42630798468005626	2				NaN	NaN	0	NaN	9171	3890	13058
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13064	34.948	NaN	2122.5	30	0	268.18	0.106			+	-1	SATNLGMVI	9	57	461.2386743990804	920.4627958649609	2	461.2393798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_SATNLGM(Oxidation (M))VI_	REV__ENSG00000136237|ENST00000665637|RAPGEF5;REV__ENST00000468825.1_1_7:22179621-22184834:-|nuORF;REV__nc|ENSG00000136237|Q92565-2|RAPGEF5;REV__nc|ENSG00000136237|Q92565|RAPGEF5	34.172542307311794	0.4838870758800184	2				NaN	NaN	0	NaN	9172	3890	13058
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13065	34.95	NaN	2138.1	30	0	95.91	0.035	+			9249	EGVLHGIFY	9	67	517.7669565945976	1033.519360255995	2	517.7686157226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EGVLHGIFY_	ENSG00000064652|ENST00000261369|SNX24;ENST00000503149.5_1_5:122301174-122343441:+|nuORF;ENST00000513881.5_1_5:122337738-122343441:+|nuORF	60.29395666154354	0.21116425950210296	2				NaN	NaN	0	NaN	9173	3890	13058
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13077	34.975	NaN	10270	30	0	1328.4	0.214	+			1907	AIQLPISSK	9	68	478.7918363069617	955.5691196807235	2	478.79217529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AIQLPISSK_	ENST00000518468.1_3_8:53599460-53658116:-|nuORF	80.45461616416974	0.09558281504443908	2				NaN	NaN	0	NaN	9182	3893	13076
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13078	34.979	NaN	4227.2	30	0	279.79	0.106			+	12321	GDGRGARQY	9	59	490.23950437143804	978.4644558096761	2	490.2397155761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GDGRGARQY_	REV__ENST00000409410.6_3_19:38826782-38827079:+|nuORF	45.9519527083369	0.35044536499095585	2				NaN	NaN	0	NaN	9183	3893	13076
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13079	34.981	NaN	5707.3	30	0	878.17	0.106	+			10751	FAENGTVQY	9	59	514.7373849455211	1027.460216957842	2	514.7376098632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FAENGTVQY_	ENSG00000100417|ENST00000216259|PMM1;ENST00000472620.5_1_22:41980283-41985061:-|nuORF;ENST00000478337.1_1_22:41980122-41985809:-|nuORF;ENST00000482178.5_1_22:41980283-41980722:-|nuORF;ENST00000485648.5_1_22:41980283-41985809:-|nuORF;PMM1|p.E103Sfs*6|1|0.05|ENSG00000100417|chr22:41584348-41584348|C/-|frameshift_variant	143.8867514904718	0.008656634767784652	2				NaN	NaN	0	NaN	9184	3893	13076
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13080	34.983	NaN	3274.1	30	0	762.86	0.106	+			43793	TLLEGDGPKTY	11	63	597.3061443596654	NaN	0	597.3056030273438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TLLEGDGPKTY_	ENSG00000166426|ENST00000299529|CRABP1;ENST00000406419.1_1_15:78633606-78640316:+|nuORF	30.317721548370564	0.4303027717346894	2				NaN	NaN	0	NaN	9185	3893	13076
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13081	34.984	NaN	2512.9	30	0	181.97	0.106	+			51216	YPTEDYKVY	9	69	589.2737455969745	1176.532938260749	2	589.274169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YPTEDYKVY_	ENSG00000167515|ENST00000696289|TRAPPC2L;ENST00000564547.1_1_16:88923507-88925305:+|nuORF;ENST00000565309.1_1_16:88925068-88926212:+|nuORF;nc|ENSG00000167515|Q9UL33|TRAPPC2L	67.49366992349736	0.1516260258713357	2				NaN	NaN	0	NaN	9186	3893	13076
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13082	34.986	NaN	2159.8	30	0	257.2	0.106			+	26452	LTGWRYTM	8	70	522.2536692364675	NaN	0	522.2555541992188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_LTGWRYTM(Oxidation (M))_	REV__ANO10|p.R285Gfs*49|1|0.15|ENSG00000160746|chr3:43577001-43577001|G/-|frameshift_variant;REV__ENSG00000160746|ENST00000292246|ANO10;REV__nc|ENSG00000160746|Q9NW15-3|ANO10;REV__nc|ENSG00000160746|Q9NW15-4|ANO10;REV__nc|ENSG00000160746|Q9NW15-5|ANO10	64.20726635412375	1.7418937515398478	2				NaN	NaN	0	NaN	9187	3893	13076
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13083	34.988	NaN	2883.4	30	0	329.98	0.035			+	43761	TLGIESLFQ	9	65	504.27258219431684	NaN	0	504.27142333984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TLGIESLFQ_	REV__tr|U7T3G4|U7T3G4_FUSNUAminobenzoyl-glutamatetransporterOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00266PE=4SV=1	35.61828744233558	0.29773779453147337	2				NaN	NaN	0	NaN	9188	3893	13076
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13096	35.015	NaN	13380	30	0	5503.5	0.214			+	47416	VPPKLWMCL	9	54	362.86556774461275	1085.5748738340383	3	362.8659362792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VPPKLWMCL_	REV__ENST00000591629.1_1_18:37115535-37380052:-|nuORF	26.79610172149135	0.5528238334041078	2				NaN	NaN	0	NaN	9198	3896	13095
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13097	35.019	NaN	5112.6	30	0	868.28	0.106			+	25273	LNQNIAKI	8	65	457.2762074495895	912.537861965979	2	457.276611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LNQNIAKI_	REV__ENSG00000134313|ENST00000256707|KIDINS220;REV__ENST00000488729.5_1_2:8870852-8965899:-|nuORF;REV__KIDINS220|p.K1581Rfs*8|1|0.28|ENSG00000134313|chr2:8731294-8731294|T/-|frameshift_variant;REV__KIDINS220|p.P1081Rfs*48|1|0.22|ENSG00000134313|chr2:8750284-8750284|G/-|frameshift_variant;REV__KIDINS220|p.R1551Efs*38|1|0.08|ENSG00000134313|chr2:8731386-8731386|C/-|frameshift_variant;REV__nc|ENSG00000134313|Q9ULH0-2|KIDINS220;REV__nc|ENSG00000134313|Q9ULH0-3|KIDINS220;REV__nc|ENSG00000134313|Q9ULH0-4|KIDINS220	88.64286706044652	0.2815785716369046	2				NaN	NaN	0	NaN	9199	3896	13095
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13098	35.021	NaN	2300.3	30	0	273.34	0.106	+			13191	GIANITALK	9	55	450.7786495164299	899.5427460996598	2	450.7790832519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GIANITALK_	ENSG00000197694|ENST00000372739|SPTAN1;nc|ENSG00000197694|Q13813-3|SPTAN1;nc|ENSG00000197694|Q13813|SPTAN1	51.19269402634007	0.2889735674168909	2				NaN	NaN	0	NaN	9200	3896	13095
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13099	35.023	NaN	4911	30	0	596.07	0.106	+			42379	TAIRALETY	9	74	519.2851855885633	1036.5558182439265	2	518.7875366210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TAIRALETY_	ELL2|p.H478Afs*4|1|0.2|ENSG00000118985|chr5:95898334-95898335|-/T|frameshift_variant;ELL2|p.K468Nfs*8|1|0.32|ENSG00000118985|chr5:95898361-95898361|T/-|frameshift_variant;ENSG00000118985|ENST00000237853|ELL2;ENST00000506628.1_1_5:95242411-95297425:-|nuORF;nc|ENSG00000118985|O00472-2|ELL2	53.59686742100583	0.26699147868981316	2				NaN	NaN	0	NaN	9201	3896	13095
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13100	35.024	NaN	3142	30	0	196.45	0.106	+			20492	KEYVGIVRL	9	69	538.8265726606096	1075.638592388019	2	538.8271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEYVGIVRL_	ENSG00000130826|ENST00000369550|DKC1;nc|ENSG00000130826|O60832-2|DKC1	52.936696900407355	0.27249468807391813	2				NaN	NaN	0	NaN	9202	3896	13095
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13101	35.026	NaN	6036.5	30	0	413.9	0.035			+	7584	DILKRQFK	8	84	524.318511662694	1046.622470392188	2	524.3196411132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DILKRQFK_	REV__ENSG00000173276|ENST00000310826|ZBTB21	58.78195531508484	0.5138399468736706	2				NaN	NaN	0	NaN	9203	3896	13095
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13102	35.027	NaN	4699.3	30	0	570.65	0.141			+	-1	DPCDTPKLF	9	72	546.7545589603178	1091.4945649874355	2	546.75537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_DPC(Carbamidomethyl (C))DTPKLF_	REV__nc|ENSG00000101665|O15105-3|SMAD7	39.252832667884924	0.4290233611298554	2				NaN	NaN	0	NaN	9204	3896	13095
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13114	35.054	NaN	12214	30	0	1787.2	0.214	+			42380	TAIRALETY	9	81	519.2851855885633	1036.5558182439265	2	519.285400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAIRALETY_	ELL2|p.H478Afs*4|1|0.2|ENSG00000118985|chr5:95898334-95898335|-/T|frameshift_variant;ELL2|p.K468Nfs*8|1|0.32|ENSG00000118985|chr5:95898361-95898361|T/-|frameshift_variant;ENSG00000118985|ENST00000237853|ELL2;ENST00000506628.1_1_5:95242411-95297425:-|nuORF;nc|ENSG00000118985|O00472-2|ELL2	86.88156770896713	0.07365720931774442	2				NaN	NaN	0	NaN	9213	3899	13113
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13115	35.058	NaN	2747.7	30	0	434	0.106	+			38987	SSSDNFLLK	9	67	505.7608179872882	1009.5070830413764	2	505.7606506347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSSDNFLLK_	ADGRL4|p.M380Rfs*18|1|0.04|ENSG00000162618|chr1:78921731-78921732|-/TATTTATAAATGTTGCTTTTTC|frameshift_variant;ENSG00000162618|ENST00000370742|ADGRL4	47.95952297671804	0.32689736945648856	2				NaN	NaN	0	NaN	9214	3899	13113
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13116	35.06	NaN	3304.1	30	0	283.24	0.106	+			25928	LSGVGTLLSL	10	58	480.2925022474488	958.5704515616976	2	481.2949523925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSGVGTLLSL_	ENST00000240922.7_1_3:113440072-113440111:-|nuORF	26.69291269510374	0.6618461711292317	2				NaN	NaN	0	NaN	9215	3899	13113
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13117	35.062	NaN	1342.9	30	0	113.51	0.106	+			46182	VDVSVPKV	8	42	421.7527010162138	841.4908490992276	2	421.7521057128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VDVSVPKV_	AHNAK|p.K2311Rfs*11|1|0.33|ENSG00000124942|chr11:62527487-62527487|G/-|frameshift_variant;AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;AHNAK|p.L2124Ifs*37|1|0.04|ENSG00000124942|chr11:62528048-62528049|-/ATGCCTGATA|frameshift_variant;AHNAK|p.S1888Qfs*8|1|0.11|ENSG00000124942|chr11:62528755-62528756|-/G|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK	64.20726635412375	0.4601301477144759	2				NaN	NaN	0	NaN	9216	3899	13113
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13118	35.063	NaN	2684.9	30	0	254.31	0.106			+	9658	ELSPVSASDI	10	63	509.2580776627871	1016.5016023923743	2	509.7593688964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ELSPVSASDI_	REV__ENSG00000198901|ENST00000394249|PRC1;REV__ENST00000417173.6_1_15:91524704-91537723:-|nuORF;REV__ENST00000557763.5_1_15:91524929-91537713:-|nuORF;REV__ENST00000560605.1_1_15:91524929-91537723:-|nuORF;REV__nc|ENSG00000198901|O43663-2|PRC1;REV__nc|ENSG00000198901|O43663-3|PRC1;REV__nc|ENSG00000198901|O43663-4|PRC1	44.377184641726394	0.5088115166961078	2				NaN	NaN	0	NaN	9217	3899	13113
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13119	35.065	NaN	3360.5	30	0	256.36	0.037	+			42454	TAMDVVYALK	10	70	563.7961178868221	1125.5776828404441	2	564.2962036132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_TAM(Oxidation (M))DVVYALK_	ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2	54.722347961057174	0.4138398245444204	2				NaN	NaN	0	NaN	9218	3899	13113
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13120	35.066	NaN	2804	30	0	251.17	0.14	+			9808	EPEHLLPVA	9	70	502.7741874510998	1003.5338219689996	2	502.7744445800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EPEHLLPVA_	ENST00000439351.5_2_3:186288616-186289895:+|nuORF	40.77816245573522	0.41113185337114944	2				NaN	NaN	0	NaN	9219	3899	13113
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13134	35.097	NaN	23700	30	0	3274.2	0.215				-1	 	0	83	478.8101964805433	955.6058400278866	2	478.8103942871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9230	3902	13133
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13135	35.101	NaN	25770	30	0	18903	0.106				-1	 	0	60	379.2092163386489	756.4038797440978	2	379.20947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9231	3902	13133
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13136	35.103	NaN	9795.5	30	0	2420	0.106	+			37354	SLFEGSLSK	9	68	484.2580202572138	966.5014875812276	2	484.2583312988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLFEGSLSK_	ENSG00000092140|ENST00000206595|G2E3;ENST00000468439.2_1_3:132106687-132107131:+|nuORF	83.6470233535746	0.08277643980271215	2				NaN	NaN	0	NaN	9232	3902	13133
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13137	35.105	NaN	9540.5	30	0	1777	0.106				-1	 	0	60	463.75014261834747	925.485732303495	2	463.75042724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9233	3902	13133
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13138	35.106	NaN	6087.2	30	0	1137.1	0.106	+			35304	SAMESFIEK	9	70	521.2492324829091	1040.483912032618	2	521.2503051757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SAMESFIEK_	ENSG00000120451|ENST00000265909|SNX19;ENST00000527451.1_1_11:130773148-130776010:-|nuORF	59.93077597824379	0.21419174904018318	2				NaN	NaN	0	NaN	9234	3902	13133
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13139	35.108	NaN	5130	30	0	396.78	0.036	+			23290	KYMLKANLI	9	71	547.3247095444691	1092.634866155738	2	547.3258666992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KYMLKANLI_	ENSG00000164134|ENST00000296543|NAA15;NAA15|p.N614Mfs*22|1|0.12|ENSG00000164134|chr4:139370291-139370291|A/-|frameshift_variant;nc|ENSG00000164134|Q9BXJ9-4|NAA15	51.33545320467046	0.2872990594074956	2				NaN	NaN	0	NaN	9235	3902	13133
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13140	35.109	NaN	6005	30	0	1718.4	0.146	+			4587	ATLGDLKLVEK	11	46	396.23923775871856	1185.6958838763558	3	396.2394714355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATLGDLKLVEK_	ENSG00000129083|ENST00000439561|COPB1	32.81241826257853	0.645615689454792	2				NaN	NaN	0	NaN	9236	3902	13133
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13151	35.136	NaN	19631	30	0	3563	0.214			+	39845	STLLPLQR	8	71	464.28443854626124	926.5543241593225	2	464.2844543457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STLLPLQR_	REV__ENSG00000165271|ENST00000297990|NOL6;REV__nc|ENSG00000165271|Q9H6R4-2|NOL6;REV__nc|ENSG00000165271|Q9H6R4-4|NOL6;REV__NOL6|p.Q953Kfs*32|4|0.2|ENSG00000165271|chr9:33464084-33464084|G/-|frameshift_variant	76.84663266511073	0.3498490246073164	2				NaN	NaN	0	NaN	9244	3905	13150
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13152	35.139	NaN	3186.8	30	0	426.46	0.106				-1	 	0	65	501.2567755597808	500.2494990931808	1	501.2581787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9245	3905	13150
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13153	35.141	NaN	4976.5	30	0	1173	0.106	+			48485	VTMKEILLK	9	57	358.89096834773204	1073.651075643396	3	358.8912353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTMKEILLK_	ENSG00000119487|ENST00000265960|MAPKAP1;nc|ENSG00000119487|Q9BPZ7-2|MAPKAP1;nc|ENSG00000119487|Q9BPZ7-3|MAPKAP1;nc|ENSG00000119487|Q9BPZ7-4|MAPKAP1;nc|ENSG00000119487|Q9BPZ7-5|MAPKAP1;nc|ENSG00000119487|Q9BPZ7-6|MAPKAP1	52.936696900407355	0.27249468807391813	2				NaN	NaN	0	NaN	9246	3905	13150
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13154	35.143	NaN	1914.6	30	0	346.05	0.106	+			11755	FSIFVGPKL	9	60	504.29803966015834	NaN	0	504.2977294921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FSIFVGPKL_	tr|U7SPX4|U7SPX4_FUSNUHAE1familyhydrophobic/amphiphilicexporter-1(MainlyG-bacteria)OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01680PE=4SV=1	36.446750945000026	0.29355505452396785	2				NaN	NaN	0	NaN	9247	3905	13150
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13155	35.145	NaN	3251.9	30	0	553.66	0.106			+	23158	KVYKVKAEI	9	62	539.335725412982	1076.656897892764	2	539.336181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KVYKVKAEI_	REV__ENSG00000171914|ENST00000636159|TLN2	27.047317107675042	0.5504760921104335	2				NaN	NaN	0	NaN	9248	3905	13150
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13156	35.147	NaN	2941.6	30	0	247.09	0.106	+			7532	DGSIVLSLAR	10	67	515.7973733145049	1029.5801936958096	2	515.7985229492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DGSIVLSLAR_	ATP13A1|p.P794S|1|0.15|ENSG00000105726|chr19:19649896-19649896|G/A|missense_variant	35.15202426646627	0.5927656479315102	2				NaN	NaN	0	NaN	9249	3905	13150
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13157	35.149	NaN	1000.5	30	0	125.54	0.035	+			8052	DVDLVQKY	8	50	490.25799560546875	NaN	0	490.25799560546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DVDLVQKY_	ENSG00000196611|ENST00000315274|MMP1	25.450171626174864	1.7418937515398478	2				NaN	NaN	0	NaN	9250	3905	13150
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13169	35.174	NaN	12213	30	0	2602.1	0.214			+	13411	GLFQATLIA	9	67	467.27286500446917	932.5311770757384	2	467.27349853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GLFQATLIA_	REV__tr|U7T2T6|U7T2T6_FUSNUMATEfamilymultidrugresistanceproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00453PE=4SV=1	51.33545320467046	0.2872990594074956	2				NaN	NaN	0	NaN	9259	3908	13168
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13170	35.178	NaN	7570.2	30	0	429.73	0.106	+			42359	TAIEKVVQM	9	79	509.7832058581608	1017.5518587831216	2	509.7835998535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAIEKVVQM_	ENSG00000142627|ENST00000358432|EPHA2	88.17693792209575	0.07000514020414955	2				NaN	NaN	0	NaN	9260	3908	13168
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13171	35.18	NaN	6042.3	30	0	794.27	0.106	+			51228	YPVEIHEY	8	73	525.2499535427805	1048.485354152361	2	525.2504272460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YPVEIHEY_	C1D|p.W68Gfs*16|1|0.11|ENSG00000197223|chr2:68046347-68046347|A/-|frameshift_variant;ENSG00000197223|ENST00000410067|C1D;ENST00000485709.1_1_2:68273401-68290109:-|nuORF	85.35947970620816	0.2915182781752196	2				NaN	NaN	0	NaN	9261	3908	13168
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13172	35.182	NaN	2622.1	30	0	341.24	0.106			+	46576	VFLVVGSLGAL	11	70	537.832405431923	1073.650257930646	2	537.83349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VFLVVGSLGAL_	REV__ENSG00000253958|ENST00000519106|CLDN23	53.351449002276354	0.38280258784255455	2				NaN	NaN	0	NaN	9262	3908	13168
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13173	35.183	NaN	1304.7	30	0	798.75	0.106				-1	 	0	19	327.2023633255904	652.3901737179808	2	327.20257568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9263	3908	13168
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13174	35.185	NaN	4485.9	30	0	657.73	0.035	+			17491	IDCLGIVLE	9	66	516.275181371915	1030.5358098106299	2	516.275146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_IDC(Carbamidomethyl (C))LGIVLE_	ENSG00000169507|ENST00000685975|SLC38A11;nc|ENSG00000169507|Q08AI6-2|SLC38A11;nc|ENSG00000169507|Q08AI6|SLC38A11;SLC38A11|p.I320Yfs*12|1|0.39|ENSG00000169507|chr2:164898700-164898701|-/A|frameshift_variant	84.9155231211612	0.07920012719736333	2				NaN	NaN	0	NaN	9264	3908	13168
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13175	35.186	NaN	3398	30	0	439.18	0.139	+			35909	SEFPAARL	8	57	445.74000248804066	NaN	0	445.739990234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SEFPAARL_	BCOR|p.K1061Sfs*52|1|0.28|ENSG00000183337|chrX:40071029-40071029|T/-|frameshift_variant;BCOR|p.K839Qfs*5|1|0.26|ENSG00000183337|chrX:40072831-40072832|-/G|frameshift_variant;BCOR|p.K839Sfs*17|1|0.41|ENSG00000183337|chrX:40072832-40072832|G/-|frameshift_variant;BCOR|p.L1646Sfs*28|1|0.06|ENSG00000183337|chrX:40053926-40053926|G/-|frameshift_variant;BCOR|p.L487Hfs*13|1|0.67|ENSG00000183337|chrX:40073886-40073887|-/GTGT|frameshift_variant;BCOR|p.N529Tfs*60|1|0.51|ENSG00000183337|chrX:40073760-40073760|T/-|frameshift_variant;BCOR|p.P1621Qfs*53|2|0.52|ENSG00000183337|chrX:40054000-40054000|G/-|frameshift_variant;BCOR|p.R1215Kfs*30|1|0.14|ENSG00000183337|chrX:40063811-40063812|-/T|frameshift_variant;ENSG00000183337|ENST00000378444|BCOR;ENST00000490976.5_1_X:39931586-39937182:-|nuORF;nc|ENSG00000183337|Q6W2J9-2|BCOR;nc|ENSG00000183337|Q6W2J9-3|BCOR;nc|ENSG00000183337|Q6W2J9-4|BCOR	31.954861631926434	1.7418937515398478	2				NaN	NaN	0	NaN	9265	3908	13168
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13187	35.213	NaN	9755.7	30	0	1099	0.214	+			11500	FPDKPITQY	9	73	554.7868170656611	1107.5590811981222	2	554.7879028320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FPDKPITQY_	ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656-2|DDOST;nc|ENSG00000244038|P39656-3|DDOST;nc|ENSG00000244038|P39656|DDOST	93.5975768576971	0.05472259948179787	2				NaN	NaN	0	NaN	9274	3911	13186
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13188	35.217	NaN	4808.6	30	0	1195.7	0.106	+			4238	ATGDMSGLLK	10	72	496.7570965016352	991.4996400700704	2	496.75775146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATGDMSGLLK_	ENSG00000127837|ENST00000248450|AAMP;ENST00000475678.5_1_2:219131145-219134809:-|nuORF;ENST00000489767.5_1_2:219130391-219134818:-|nuORF	83.6470233535746	0.16744595502813267	2				NaN	NaN	0	NaN	9275	3911	13186
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13189	35.219	NaN	4640.8	30	0	502.62	0.106			+	31044	QEVPTMPQY	9	67	546.7545589603178	1091.4945649874355	2	546.756591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QEVPTMPQY_	REV__ENSG00000187068|ENST00000335012|C3orf70	35.61828744233558	0.47037581924408073	2				NaN	NaN	0	NaN	9276	3911	13186
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13190	35.22	NaN	3626.4	30	0	672.4	0.106	+			42782	TEAGALHVL	9	68	455.75267423344314	909.4907955336863	2	455.75274658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TEAGALHVL_	ENSG00000105639|ENST00000458235|JAK3;ENST00000526008.5_1_19:17949989-17958765:-|nuORF;ENST00000527031.5_1_19:17947866-17955268:-|nuORF;ENST00000528293.1_1_19:17953965-17958870:-|nuORF;JAK3|p.Q39Pfs*13|1|0.25|ENSG00000105639|chr19:17844302-17844303|-/G|frameshift_variant;JAK3|p.Q39Sfs*108|1|0.12|ENSG00000105639|chr19:17844303-17844303|G/-|frameshift_variant;nc|ENSG00000105639|P52333-2|JAK3;nc|ENSG00000105639|P52333-4|JAK3	55.50420428727701	0.2510918378945873	2				NaN	NaN	0	NaN	9277	3911	13186
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13191	35.222	NaN	2649.1	30	0	300.39	0.106	+			23989	LDYLRISKI	9	59	560.83956097935	1119.6645690255	2	560.8400268554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LDYLRISKI_	chr19:41727352-41769320|187|11.17|0.17|6.01|+|0|TE_info:MER65-int,MER65-int_dup834,ERV1,LTR,acceptor,+,41769320,41770124|CEACAM5,None|2	29.170058357718403	0.5306379469863586	2				NaN	NaN	0	NaN	9278	3911	13186
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13192	35.224	NaN	1646.7	30	0	224.54	0.033	+			10780	FAGPCKVI	8	47	417.7300313124436	833.4455096916872	2	417.7306213378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FAGPCKVI_	ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC;PRKDC|p.D2437Wfs*3|1|0.11|ENSG00000253729|chr8:47840161-47840162|-/CA|frameshift_variant;PRKDC|p.E1557Sfs*16|1|0.16|ENSG00000253729|chr8:47886051-47886051|C/-|frameshift_variant;PRKDC|p.G1227Vfs*50|2|0.31|ENSG00000253729|chr8:47893306-47893306|C/-|frameshift_variant;PRKDC|p.K3681Nfs*6|1|0.32|ENSG00000253729|chr8:47785174-47785177|TTCT/-|frameshift_variant;PRKDC|p.M3670*|1|0.5|ENSG00000253729|chr8:47785212-47785212|T/-|frameshift_variant;PRKDC|p.M3846Cfs*12|1|0.13|ENSG00000253729|chr8:47779047-47779047|T/-|frameshift_variant;PRKDC|p.M4020Cfs*2|1|0.31|ENSG00000253729|chr8:47776968-47776968|T/-|frameshift_variant;PRKDC|p.N3605Kfs*3|1|0.22|ENSG00000253729|chr8:47788993-47788994|-/T|frameshift_variant;PRKDC|p.N4037Ifs*15|1|0.17|ENSG00000253729|chr8:47776916-47776916|T/-|frameshift_variant;PRKDC|p.R2704Gfs*13|2|0.34|ENSG00000253729|chr8:47834238-47834238|T/-|frameshift_variant;PRKDC|p.S3402Ifs*16|1|0.04|ENSG00000253729|chr8:47799302-47799303|-/AAACCGTGAGTTAGAGGAGGTAA|frameshift_variant;PRKDC|p.S4099Qfs*6|1|0.25|ENSG00000253729|chr8:47774265-47774265|A/-|frameshift_variant;PRKDC|p.T3268Pfs*7|1|0.5|ENSG00000253729|chr8:47803426-47803426|T/-|frameshift_variant;PRKDC|p.W3401Cfs*4|1|0.01|ENSG00000253729|chr8:47799304-47799305|-/AATGAATA|frameshift_variant	52.29916861842294	0.578018602984656	2				NaN	NaN	0	NaN	9279	3911	13186
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13205	35.251	NaN	3567	30	0	400.16	0.214	+			8460	EASAVTVRF	9	60	490.26289047642626	978.5112280196525	2	490.26348876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EASAVTVRF_	ENSG00000116786|ENST00000375799|PLEKHM2;ENST00000477849.1_1_1:16056358-16058475:+|nuORF;nc|ENSG00000116786|Q8IWE5-2|PLEKHM2;PLEKHM2|p.E769Rfs*51|2|0.23|ENSG00000116786|chr1:15730622-15730622|C/-|frameshift_variant	59.93077597824379	0.21419174904018318	2				NaN	NaN	0	NaN	9289	3914	13204
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13206	35.254	NaN	3422.8	30	0	1883.9	0.106			+	-1	SACLVIGLA	9	56	452.2515577051567	902.4885624771134	2	452.251708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SAC(Carbamidomethyl (C))LVIGLA_	REV__ENST00000487137.6_1_14:23516386-23516554:-|nuORF	42.47446043378293	0.39123495718708534	2				NaN	NaN	0	NaN	9290	3914	13204
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13207	35.256	NaN	2929.1	30	0	401.14	0.106				-1	TVKKTMNM	8	64	484.7470928628215	NaN	0	484.7467346191406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_TVKKTM(Oxidation (M))NM_	ENSG00000182628|ENST00000330137|SKA2;ENST00000583976.1_1_17:57189640-57232487:-|nuORF;SKA2|p.K91Nfs*13|1|0.07|ENSG00000182628|chr17:59119343-59119343|T/-|frameshift_variant	53.351449002276354	1.7418937515398478	2				NaN	NaN	0	NaN	9291	3914	13204
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13208	35.258	NaN	1229.5	30	0	210.58	0.106	+			310	AAPMSTSVM	9	44	447.70601702949364	893.3974811257873	2	447.7062072753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AAPMSTSVM_	ENSG00000197142|ENST00000354655|ACSL5;nc|ENSG00000197142|Q9ULC5-3|ACSL5;nc|ENSG00000197142|Q9ULC5-4|ACSL5	37.15910966729921	0.4535818937225704	2				NaN	NaN	0	NaN	9292	3914	13204
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13209	35.26	NaN	1712.7	30	0	233.78	0.106	+			10186	ETATTPAKP	9	58	458.24246917713003	NaN	0	458.24261474609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ETATTPAKP_	ENSG00000225614|ENST00000565624|ZNF469;ZNF469|p.A3754Rfs*17|1|0.31|ENSG00000225614|chr16:88438809-88438810|-/C|frameshift_variant;ZNF469|p.R3818Gfs*95|1|0.46|ENSG00000225614|chr16:88439000-88439000|C/-|frameshift_variant	49.44154591367651	0.21054156626303966	2				NaN	NaN	0	NaN	9293	3914	13204
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13210	35.262	NaN	3222.4	30	0	317.41	0.035			+	46310	VEKGELPVL	9	60	492.2915909414478	982.5686289496956	2	492.2923889160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VEKGELPVL_	REV__ENSG00000100678|ENST00000356921|SLC8A3;REV__nc|ENSG00000100678|P57103-3|SLC8A3;REV__nc|ENSG00000100678|P57103-6|SLC8A3;REV__nc|ENSG00000100678|P57103-7|SLC8A3;REV__nc|ENSG00000100678|P57103|SLC8A3	47.657333605630114	0.33044192980041115	2				NaN	NaN	0	NaN	9294	3914	13204
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13211	35.262	NaN	2220.1	30	0	759.51	0.138	+			51263	YRGAHGII	8	56	443.74776135953664	NaN	0	443.74737548828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YRGAHGII_	ENSG00000138069|ENST00000409784|RAB1A;ENSG00000174903|ENST00000311481|RAB1B	46.76643321282427	1.7418937515398478	2				NaN	NaN	0	NaN	9295	3914	13204
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13222	35.289	NaN	5918	30	0	925.6	0.214	+			44944	TVATAVEQY	9	64	491.24765052510367	980.4807481170074	2	491.2476501464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVATAVEQY_	ENSG00000116209|ENST00000234831|TMEM59	109.47833844074708	0.029530294723441826	2				NaN	NaN	0	NaN	9303	3917	13221
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13223	35.293	NaN	6706.6	30	0	465.89	0.106	+			921	AEIEQYRL	8	72	511.2681708405995	1020.521788747999	2	511.2696838378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEIEQYRL_	ENSG00000136888|ENST00000374050|ATP6V1G1	82.24051045832904	0.30490469762271794	2				NaN	NaN	0	NaN	9304	3917	13221
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13224	35.295	NaN	7031.1	30	0	1199.7	0.106			+	25602	LQKVVGNAV	9	62	464.28443854626124	926.5543241593225	2	464.2857971191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LQKVVGNAV_	REV__ENSG00000107651|ENST00000369075|SEC23IP;REV__nc|ENSG00000107651|Q9Y6Y8-2|SEC23IP	53.351449002276354	0.2690372970092375	2				NaN	NaN	0	NaN	9305	3917	13221
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13225	35.296	NaN	2216.4	30	0	215.01	0.106			+	18259	IPDSKIALS	9	61	472.27595888282997	942.53736483246	2	472.27789306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IPDSKIALS_	REV__ENSG00000143669|ENST00000389793|LYST;REV__ENST00000465349.5_1_1:235954948-235996891:-|nuORF;REV__ENST00000489585.5_1_1:235926109-235996891:-|nuORF;REV__LYST|p.E1851Dfs*2|1|0.15|ENSG00000143669|chr1:235774994-235774994|T/-|frameshift_variant;REV__LYST|p.F2078Lfs*38|1|0.35|ENSG00000143669|chr1:235762739-235762739|A/-|frameshift_variant;REV__nc|ENSG00000143669|Q99698-2|LYST;REV__nc|ENSG00000143669|Q99698-3|LYST	52.936696900407355	0.27249468807391813	2				NaN	NaN	0	NaN	9306	3917	13221
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13226	35.298	NaN	3203.9	30	0	508.13	0.106	+			832	AEGFVRAL	8	55	431.74209815614716	861.4696433790944	2	431.74261474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEGFVRAL_	ENSG00000177606|ENST00000371222|JUN;JUN|p.R257Kfs*53|1|0.31|ENSG00000177606|chr1:58782301-58782302|-/T|frameshift_variant	71.87747018426188	0.391254423828572	2				NaN	NaN	0	NaN	9307	3917	13221
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13227	35.3	NaN	1720.9	30	0	190.28	0.035				-1	EMCAQKKE	8	55	520.231679640542	NaN	0	520.23193359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),Oxidation (M)	_EM(Oxidation (M))C(Carbamidomethyl (C))AQKKE_	ENST00000369405.7_1_10:114205145-114205280:-|nuORF	42.47446043378293	1.7418937515398478	2				NaN	NaN	0	NaN	9308	3917	13221
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13240	35.327	NaN	43063	30	0	4958.9	0.214	+			28282	NEASVLHNL	9	102	498.75865124401	995.5027495548201	2	498.7589111328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NEASVLHNL_	ENSG00000078814|ENST00000262873|MYH7B;ENSG00000100345|ENST00000216181|MYH9;ENSG00000105357|ENST00000642316|MYH14;ENSG00000133026|ENST00000360416|MYH10;ENSG00000133392|ENST00000300036|MYH11;MYH10|p.A411Pfs*11|1|0.15|ENSG00000133026|chr17:8546562-8546562|T/-|frameshift_variant;MYH14|p.G549Wfs*8|1|0.23|ENSG00000105357|chr19:50250519-50250520|-/C|frameshift_variant;MYH14|p.L1950Sfs*14|1|0.34|ENSG00000105357|chr19:50309646-50309646|C/-|frameshift_variant;MYH14|p.M997*|1|0.19|ENSG00000105357|chr19:50271483-50271483|A/-|frameshift_variant;MYH14|p.P548Lfs*25|2|0.32|ENSG00000105357|chr19:50250520-50250520|C/-|frameshift_variant;MYH14|p.R929Gfs*44|1|0.38|ENSG00000105357|chr19:50268237-50268237|G/-|frameshift_variant;MYH9|p.C91Y|1|0.25|ENSG00000100345|chr22:36348965-36348965|C/T|missense_variant;MYH9|p.I784*|1|0.07|ENSG00000100345|chr22:36304036-36304036|G/-|frameshift_variant;nc|ENSG00000078814|A7E2Y1-2|MYH7B;nc|ENSG00000078814|A7E2Y1|MYH7B;nc|ENSG00000105357|Q7Z406-4|MYH14;nc|ENSG00000105357|Q7Z406-5|MYH14;nc|ENSG00000105357|Q7Z406-6|MYH14;nc|ENSG00000105357|Q7Z406|MYH14;nc|ENSG00000133026|P35580-2|MYH10;nc|ENSG00000133026|P35580-3|MYH10;nc|ENSG00000133026|P35580-5|MYH10;nc|ENSG00000133026|P35580|MYH10;nc|ENSG00000133392|P35749-2|MYH11;nc|ENSG00000133392|P35749-3|MYH11;nc|ENSG00000133392|P35749-4|MYH11	146.78539889680295	0.007618400906539062	2				NaN	NaN	0	NaN	9318	3920	13239
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13241	35.331	NaN	29990	30	0	3024.2	0.106	+			4667	ATLQYIVGR	9	87	510.79511003020355	1019.5756671272071	2	510.7960510253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATLQYIVGR_	ENSG00000085377|ENST00000652536|PREP;PREP|p.L670Cfs*20|1|0.16|ENSG00000085377|chr6:105278269-105278269|G/-|frameshift_variant	129.42129120953632	0.01549634589885217	2				NaN	NaN	0	NaN	9319	3920	13239
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13242	35.333	NaN	9494	30	0	831.45	0.106	+			2515	APVGGHILSY	10	81	507.2730137231616	1012.5314745131233	2	507.2740783691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_APVGGHILSY_	ENSG00000197879|ENST00000648651|MYO1C;nc|ENSG00000197879|O00159-2|MYO1C;nc|ENSG00000197879|O00159-3|MYO1C	76.7741389293348	0.22197596950688292	2				NaN	NaN	0	NaN	9320	3920	13239
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13243	35.335	NaN	4371.2	30	0	1283.6	0.106	+			43169	TETIAKLV	8	56	437.76523310865906	873.5159132841181	2	437.7654724121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TETIAKLV_	ENSG00000198380|ENST00000357308|GFPT1;nc|ENSG00000198380|Q06210-2|GFPT1	76.7741389293348	0.3504530765139327	2				NaN	NaN	0	NaN	9321	3920	13239
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13244	35.336	NaN	5330.7	30	0	1328.5	0.106	+			13877	GRAGWAPS	8	55	401.2040750141463	800.3935970950927	2	401.2043762207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GRAGWAPS_	ENST00000314485.11_2_1:160068207-160068342:-|nuORF	40.5726180659479	0.6527593143185008	2				NaN	NaN	0	NaN	9322	3920	13239
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13245	35.338	NaN	1998.9	30	0	340.74	0.106			+	42526	TAQLLALAGL	10	64	485.79986055350764	969.5851681738153	2	485.7999267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TAQLLALAGL_	REV__DNHD1|p.T4259Pfs*33|2|0.33|ENSG00000179532|chr11:6568772-6568772|C/-|frameshift_variant;REV__ENSG00000179532|ENST00000254579|DNHD1;REV__ENST00000525883.5_1_11:6587352-6591461:+|nuORF;REV__ENST00000529821.5_1_11:6587803-6593213:+|nuORF;REV__ENST00000530197.5_1_11:6587352-6593213:+|nuORF;REV__ENST00000533635.5_1_11:6587803-6591461:+|nuORF	54.776311868738084	0.41334902933431344	2				NaN	NaN	0	NaN	9323	3920	13239
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13246	35.34	NaN	2247.1	30	0	216.99	0.034			+	7222	DAKAPVVYS	9	65	475.2538162898546	948.4930796465093	2	475.7510681152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DAKAPVVYS_	REV__KIT|p.T734A|1|0.17|ENSG00000157404|chr4:54731386-54731386|A/G|missense_variant	30.503639358989545	0.5181749237905803	2				NaN	NaN	0	NaN	9324	3920	13239
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13257	35.365	NaN	10779	30	0	1096.1	0.215	+			42390	TAIRSGLEL	9	69	480.2790846064736	958.5436162797472	2	480.2792663574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAIRSGLEL_	ENSG00000121892|ENST00000303538|PDS5A	91.26522074875469	0.06129826844580791	2				NaN	NaN	0	NaN	9332	3923	13256
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13258	35.369	NaN	8804	30	0	1285.8	0.106	+			3062	ASFNDTFVH	9	73	519.237573150469	1036.4605933677378	2	519.238525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASFNDTFVH_	ENSG00000164587|ENST00000407193|RPS14;ENST00000519690.1_1_5:149827146-149827347:-|nuORF	115.49404669440601	0.023927554121326553	2				NaN	NaN	0	NaN	9333	3923	13256
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13259	35.371	NaN	6048.1	30	0	1716.5	0.106	+			13562	GLSTFLGAAV	10	72	468.2632451999909	934.5119374667818	2	468.26324462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GLSTFLGAAV_	ENSG00000004848|ENST00000379044|ARX	65.80317337860623	0.313061058278602	2				NaN	NaN	0	NaN	9334	3923	13256
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13260	35.373	NaN	2719.9	30	0	442.29	0.106	+			17251	HWMLEAQF	8	60	531.2478091023244	1060.4810652714486	2	531.2490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HWMLEAQF_	PPP1R21|p.L588F|1|0.09|ENSG00000162869|chr2:48498564-48498564|A/C|missense_variant	50.0245360154114	0.5941082100236891	2				NaN	NaN	0	NaN	9335	3923	13256
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13261	35.374	NaN	3843.4	30	0	468.69	0.106	+			41094	SVINPGAIYR	10	71	545.3056623103096	1088.596771687419	2	545.3070678710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVINPGAIYR_	ENSG00000115232|ENST00000397033|ITGA4;ENST00000465522.5_1_2:182322141-182350724:+|nuORF;ENST00000476089.1_1_2:182321937-182323202:+|nuORF;ENST00000484404.1_1_2:182322441-182339919:+|nuORF;ITGA4|p.T615Nfs*11|1|0.22|ENSG00000115232|chr2:181509798-181509799|-/A|frameshift_variant;nc|ENSG00000115232|P13612-2|ITGA4	54.722347961057174	0.4138398245444204	2				NaN	NaN	0	NaN	9336	3923	13256
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13262	35.376	NaN	1716.9	30	0	127.22	0.035	+			46195	VDWYQESV	8	64	513.2326135479735	NaN	0	513.233154296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VDWYQESV_	ENST00000547804.1_1_12:30952917-30954651:+|nuORF	64.20726635412375	1.7418937515398478	2				NaN	NaN	0	NaN	9337	3923	13256
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13263	35.377	NaN	2802.8	30	0	334.25	0.143	+			25976	LSITSKVQELQ	11	65	623.3564071803779	1244.6982614275557	2	623.355712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSITSKVQELQ_	ENSG00000126777|ENST00000395314|KTN1;KTN1|p.A1102Gfs*15|2|0.3|ENSG00000126777|chr14:55670756-55670757|-/A|frameshift_variant;KTN1|p.H994Sfs*2|1|0.35|ENSG00000126777|chr14:55659677-55659678|-/C|frameshift_variant;KTN1|p.K1078Nfs*12|1|0.3|ENSG00000126777|chr14:55667292-55667292|A/-|frameshift_variant;KTN1|p.K1101Rfs*18|1|0.4|ENSG00000126777|chr14:55670757-55670757|A/-|frameshift_variant;KTN1|p.P993Lfs*6|1|0.36|ENSG00000126777|chr14:55659678-55659678|C/-|frameshift_variant;nc|ENSG00000126777|Q86UP2-2|KTN1;nc|ENSG00000126777|Q86UP2-3|KTN1;nc|ENSG00000126777|Q86UP2-4|KTN1	68.84614121027924	0.24535906747804975	2				NaN	NaN	0	NaN	9338	3923	13256
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13274	35.404	NaN	26469	30	0	3994.6	0.214			+	26925	LYGALSVASV	10	84	490.27568772954953	978.5368225258991	2	490.2763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LYGALSVASV_	REV__ENSG00000182612|ENST00000611590|TSPAN10;REV__ENST00000571707.1_1_17:79609405-79612656:+|nuORF	60.97194046774394	0.3570005369683776	2				NaN	NaN	0	NaN	9346	3926	13273
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13275	35.407	NaN	2457.1	30	0	288.77	0.106			+	30309	PTNQFLIL	8	60	473.2738181582693	944.5330833833386	2	473.27398681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PTNQFLIL_	REV__ENSG00000184381|ENST00000332509|PLA2G6;REV__ENST00000471636.5_1_22:38522531-38565433:-|nuORF;REV__nc|ENSG00000184381|O60733-2|PLA2G6;REV__nc|ENSG00000184381|O60733-3|PLA2G6;REV__nc|ENSG00000184381|O60733-4|PLA2G6	44.116797842482775	0.6307669463330267	2				NaN	NaN	0	NaN	9347	3926	13273
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13276	35.409	NaN	1330.5	30	0	131.69	0.034			+	27998	MVVDWVAV	8	56	459.74150508352295	917.4684572338459	2	459.7421569824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MVVDWVAV_	REV__ENSG00000156886|ENST00000389202|ITGAD	28.2542754592877	0.7411748056684583	2				NaN	NaN	0	NaN	9348	3926	13273
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13290	35.439	NaN	17224	30	0	2938.6	0.214	+			9453	EKLTLILQ	8	75	479.30051640667784	956.5864798801557	2	479.8000183105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EKLTLILQ_	ENSG00000154640|ENST00000348354|BTG3;ENST00000464058.1_1_21:18981288-18985128:-|nuORF;nc|ENSG00000154640|Q14201-2|BTG3	66.42927471994793	0.4381325844043345	2				NaN	NaN	0	NaN	9359	3929	13289
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13291	35.443	NaN	7413.5	30	0	1924.4	0.106	+			1066	AEKVEIATL	9	79	487.2820709703028	972.5495890074056	2	487.28167724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEKVEIATL_	ENSG00000041357|ENST00000044462|PSMA4;nc|ENSG00000041357|P25789-2|PSMA4	93.5975768576971	0.05472259948179787	2				NaN	NaN	0	NaN	9360	3929	13289
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13292	35.444	NaN	4589.3	30	0	395.35	0.106			+	26840	LVVDDHGVF	9	70	500.75750448017504	NaN	0	500.7584228515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LVVDDHGVF_	REV__ENSG00000103091|ENST00000262144|WDR59;REV__ENST00000569549.5_1_16:74943656-74957850:-|nuORF;REV__nc|ENSG00000103091|Q6PJI9-2|WDR59;REV__WDR59|p.L516Yfs*7|1|0.37|ENSG00000103091|chr16:74909598-74909598|G/-|frameshift_variant;REV__WDR59|p.Q401Cfs*32|1|0.19|ENSG00000103091|chr16:74915893-74915894|-/CA|frameshift_variant	60.29395666154354	0.1480651883005104	2				NaN	NaN	0	NaN	9361	3929	13289
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13293	35.446	NaN	4673.9	30	0	515.93	0.106	+			23699	LATLEEAL	8	55	430.24231834474955	858.4700837562991	2	430.24261474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LATLEEAL_	ENSG00000187672|ENST00000288221|ERC2;ERC2|p.D867Mfs*31|1|0.61|ENSG00000187672|chr3:55734885-55734885|T/-|frameshift_variant	62.97842346883844	0.4722955155785405	2				NaN	NaN	0	NaN	9362	3929	13289
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13294	35.448	NaN	8359.7	30	0	1815.8	0.106	+			5551	AVALPVAVGR	10	66	476.80000439718776	951.5854558611755	2	476.80047607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVALPVAVGR_	ENSG00000275395|ENST00000616721|FCGBP;nc|ENSG00000275395|Q9Y6R7|FCGBP	79.45101966838831	0.2001060845487004	2				NaN	NaN	0	NaN	9363	3929	13289
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13295	35.45	NaN	2782.4	30	0	430.69	0.036	+			28161	NAMNMQETY	9	69	551.2210196093466	NaN	0	551.22119140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NAMNMQETY_	ENSG00000114520|ENST00000251775|SNX4;ENST00000473417.5_1_3:125188296-125239016:-|nuORF	87.69643885390035	0.04624013146650493	2				NaN	NaN	0	NaN	9364	3929	13289
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13296	35.45	NaN	2988.5	30	0	415.76	0.14			+	25966	LSIPHLSIQ	9	70	504.29803966015834	NaN	0	504.29913330078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSIPHLSIQ_	REV__ENST00000494283.1_1_14:50520012-50520198:+|nuORF	42.86426827375447	0.2558691296974908	2				NaN	NaN	0	NaN	9365	3929	13289
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13307	35.478	NaN	6629.7	30	0	2830.4	0.214	+			30498	QAFGEKITM	9	69	512.7596479110209	1023.5047428888419	2	512.76025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QAFGEKITM_	ENSG00000137575|ENST00000260130|SDCBP;ENST00000424643.3_1_8:70855645-70855750:+|nuORF;ENST00000519115.5_1_8:59477592-59490768:+|nuORF;ENST00000523441.1_1_8:59490633-59492419:+|nuORF;nc|ENSG00000137575|O00560-2|SDCBP;nc|ENSG00000137575|O00560-3|SDCBP	85.86182877749512	0.07653218437724067	2				NaN	NaN	0	NaN	9373	3932	13306
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13308	35.481	NaN	4455.8	30	0	724.66	0.106	+			26526	LTQNEMIFK	9	71	562.2937005133542	1122.5728480935084	2	562.294677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LTQNEMIFK_	ENSG00000054793|ENST00000338821|ATP9A;ENSG00000166377|ENST00000426216|ATP9B;nc|ENSG00000054793|O75110-2|ATP9A;nc|ENSG00000166377|O43861-2|ATP9B	143.37361013837676	0.008897369944672323	2				NaN	NaN	0	NaN	9374	3932	13306
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13309	35.483	NaN	7604.4	30	0	1093.6	0.106	+			41560	SVQETVLPIK	10	82	557.3287409495949	1112.6429289659898	2	557.3301391601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVQETVLPIK_	ENSG00000169057|ENST00000453960|MECP2;MECP2|p.E432Afs*3|1|0.03|ENSG00000169057|chrX:154030534-154030535|CC/-|frameshift_variant;MECP2|p.K449Sfs*33|1|0.2|ENSG00000169057|chrX:154030482-154030482|T/-|frameshift_variant;nc|ENSG00000169057|P51608|MECP2	125.71293069911285	0.01926106323661889	2				NaN	NaN	0	NaN	9375	3932	13306
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13310	35.485	NaN	3290.9	30	0	325.59	0.106			+	27658	MPSKLILGQ	9	68	493.7880768636546	985.5616007941093	2	493.78857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MPSKLILGQ_	REV__ENST00000560115.5_1_15:81584907-81587720:+|nuORF	72.87924865735499	0.12833875048249987	2				NaN	NaN	0	NaN	9376	3932	13306
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13311	35.487	NaN	5446.1	30	0	859.84	0.106	+			48337	VTGGIFSVTK	10	69	504.7896140457548	1007.5646751583096	2	504.7904052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTGGIFSVTK_	ENSG00000151135|ENST00000280756|TMEM263	82.83050618871818	0.17249597090446123	2				NaN	NaN	0	NaN	9377	3932	13306
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13312	35.488	NaN	2162	30	0	1025.1	0.106			+	4386	ATHLLVAP	8	42	411.2474919811275	NaN	0	411.2473449707031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATHLLVAP_	REV__ENST00000428443.7_1_2:179967411-179967483:-|nuORF	23.036711822280957	1.7418937515398478	2				NaN	NaN	0	NaN	9378	3932	13306
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13313	35.49	NaN	1789.3	30	0	128.02	0.034			+	47456	VPVSAEPPK	9	51	462.26195139249387	922.5093498517878	2	462.2627258300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VPVSAEPPK_	REV__SNAP91|p.T503A|1|0.33|ENSG00000065609|chr6:83593667-83593667|T/C|missense_variant	40.77816245573522	0.41113185337114944	2				NaN	NaN	0	NaN	9379	3932	13306
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13325	35.516	NaN	4231.3	30	0	332.8	0.214	+			24571	LGNILPVSK	9	65	470.79434980274067	939.5741466722814	2	470.7947082519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LGNILPVSK_	ADGRF1|p.S523Pfs*3|1|0.35|ENSG00000153292|chr6:47009868-47009868|A/-|frameshift_variant;ADGRF1|p.S617Afs*12|1|0.14|ENSG00000153292|chr6:47009586-47009586|T/-|frameshift_variant;ENSG00000153292|ENST00000371253|ADGRF1	41.42661286455405	0.403525789677298	2				NaN	NaN	0	NaN	9388	3935	13324
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13326	35.519	NaN	4475.7	30	0	2756.5	0.106				-1	 	0	47	357.2143736328291	712.4141943324582	2	357.21441650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9389	3935	13324
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13327	35.521	NaN	4333.7	30	0	1549.4	0.106	+			29119	NTTKFVGPA	9	63	467.7533608208469	933.4921687084939	2	467.7530822753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NTTKFVGPA_	ENST00000381482.7_1_20:2126675-2127125:+|nuORF	45.9519527083369	0.35044536499095585	2				NaN	NaN	0	NaN	9390	3935	13324
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13328	35.523	NaN	2331.3	30	0	831.1	0.106				-1	 	0	42	379.20925562573456	756.4039583182691	2	379.2095642089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9391	3935	13324
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13329	35.525	NaN	3255.6	30	0	862.41	0.106	+			25885	LSGAPRETP	9	60	464.2498352357225	926.485117538245	2	464.2495422363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSGAPRETP_	ENSG00000146216|ENST00000259750|TTBK1	37.81151784470057	0.4459294069877048	2				NaN	NaN	0	NaN	9392	3935	13324
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13330	35.527	NaN	1361.5	30	0	153.5	0.033			+	-1	YGATLCAL	8	51	434.71495379032064	867.4153546474413	2	434.7148742675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_YGATLC(Carbamidomethyl (C))AL_	REV__ENSG00000169933|ENST00000675598|FRMPD4;REV__FRMPD4|p.A947Qfs*130|1|0.42|ENSG00000169933|chrX:12717658-12717658|C/-|frameshift_variant;REV__FRMPD4|p.C618Vfs*8|1|0.19|ENSG00000169933|chrX:12716306-12716306|C/-|frameshift_variant;REV__FRMPD4|p.K1053Dfs*26|1|0.08|ENSG00000169933|chrX:12717982-12717983|-/GACTT|frameshift_variant;REV__FRMPD4|p.L1210Pfs*39|1|0.05|ENSG00000169933|chrX:12718454-12718455|-/CT|frameshift_variant;REV__FRMPD4|p.S1105Vfs*3|1|0.29|ENSG00000169933|chrX:12718134-12718134|A/-|frameshift_variant;REV__nc|ENSG00000169933|Q14CM0|FRMPD4	37.028477286268924	0.6747514403204248	2				NaN	NaN	0	NaN	9393	3935	13324
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13341	35.552	NaN	14738	30	0	2977.9	0.214	+			6385	AVVELVTVK	9	68	479.30051640667784	956.5864798801557	2	479.3021545410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVVELVTVK_	ENSG00000182220|ENST00000636580|ATP6AP2;nc|ENSG00000182220|O75787-2|ATP6AP2	88.17693792209575	0.07000514020414955	2				NaN	NaN	0	NaN	9401	3938	13340
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13342	35.556	NaN	17001	30	0	5830.2	0.106				-1	 	0	77	490.79740169519226	979.5802504571845	2	490.797607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9402	3938	13340
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13343	35.557	NaN	6677.4	30	0	1127.5	0.106	+			18015	IIIAEVVNK	9	72	499.8156853649936	NaN	0	499.8156433105469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IIIAEVVNK_	ENSG00000128641|ENST00000392318|MYO1B;nc|ENSG00000128641|O43795-2|MYO1B	127.46168284122857	0.0009793558177450096	2				NaN	NaN	0	NaN	9403	3938	13340
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13344	35.559	NaN	8410.1	30	0	840.81	0.106	+			8237	EAFKAIGTAY	10	78	535.7786014853707	1069.5426500375413	2	535.7798461914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EAFKAIGTAY_	ENSG00000148719|ENST00000444643|DNAJB12;nc|ENSG00000148719|Q9NXW2-2|DNAJB12	146.78539889680295	0.009066311176022962	2				NaN	NaN	0	NaN	9404	3938	13340
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13345	35.561	NaN	2983.2	30	0	341.86	0.106	+			13049	GEYAVHVL	8	61	444.23424936123064	886.4539457892613	2	444.23443603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GEYAVHVL_	ENSG00000196924|ENST00000369850|FLNA;FLNA|p.A1026Lfs*20|1|0.42|ENSG00000196924|chrX:154361439-154361439|C/-|frameshift_variant;FLNA|p.G2237Efs*109|1|0.28|ENSG00000196924|chrX:154352240-154352240|C/-|frameshift_variant;FLNA|p.Q1716Sfs*23|2|0.38|ENSG00000196924|chrX:154354896-154354896|G/-|frameshift_variant;FLNA|p.R2520Vfs*16|1|0.7|ENSG00000196924|chrX:154349560-154349560|G/-|frameshift_variant;nc|ENSG00000196924|P21333-2|FLNA	96.04771818265245	0.25916207331555047	2				NaN	NaN	0	NaN	9405	3938	13340
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13346	35.563	NaN	523.35	30	0	280.27	0.106				-1	 	0	12	327.20248414124524	652.3904153492905	2	327.20245361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9406	3938	13340
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13347	35.565	NaN	2561.3	30	0	554.94	0.035			+	28475	NFWFIGLM	8	56	522.2549859443943	1042.4954189555885	2	522.753662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_NFWFIGLM(Oxidation (M))_	REV__ENSG00000180974|ENST00000641726|OR52E4;REV__ENSG00000182070|ENST00000380367|OR52A1;REV__ENSG00000183269|ENST00000537935|OR52E8;REV__ENSG00000205409|ENST00000329322|OR52E6;REV__ENSG00000277932|ENST00000610445|OR52E5;REV__OR52A1|p.F254Nfs*56|1|0.04|ENSG00000182070|chr11:5151610-5151611|-/ATGTT|frameshift_variant;REV__OR52A1|p.K82N|1|0.21|ENSG00000182070|chr11:5152124-5152124|C/A|missense_variant;REV__OR52E4|p.G98Dfs*39|1|0.17|ENSG00000180974|chr11:5884581-5884581|G/-|frameshift_variant;REV__OR52E6|p.C181Tfs*72|1|0.05|ENSG00000205409|chr11:5841357-5841358|-/TTGGT|frameshift_variant;REV__OR52E8|p.F257Lfs*9|1|0.28|ENSG00000183269|chr11:5856932-5856932|A/-|frameshift_variant	46.76643321282427	0.6143254112625767	2				NaN	NaN	0	NaN	9407	3938	13340
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13359	35.59	NaN	6522.2	30	0	517.04	0.214	+			11501	FPDKPITQY	9	67	554.7868170656611	1107.5590811981222	2	554.7875366210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FPDKPITQY_	ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656-2|DDOST;nc|ENSG00000244038|P39656-3|DDOST;nc|ENSG00000244038|P39656|DDOST	83.6470233535746	0.08277643980271215	2				NaN	NaN	0	NaN	9416	3941	13358
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13360	35.594	NaN	3295.5	30	0	364.1	0.106	+			37989	SPISQKIIY	9	65	524.8048406829733	1047.5951284327466	2	524.8058471679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SPISQKIIY_	CFH|p.Q859Hfs*22|1|0.05|ENSG00000000971|chr1:196736986-196736987|-/TAATTGTATTT|frameshift_variant;CFH|p.T645Nfs*9|1|0.26|ENSG00000000971|chr1:196726523-196726524|-/A|frameshift_variant;ENSG00000000971|ENST00000367429|CFH;ENST00000466229.5_1_1:196648727-196709933:+|nuORF;nc|ENSG00000000971|P08603-2|CFH;nc|ENSG00000000971|P08603|CFH	49.536043120802724	0.308405419312776	2				NaN	NaN	0	NaN	9417	3941	13358
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13361	35.596	NaN	4848.4	30	0	355.88	0.106	+			44002	TPIEGMLSH	9	71	492.7433888229787	983.4722247127575	2	493.2464904785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TPIEGMLSH_	ENSG00000170515|ENST00000303305|PA2G4;nc|ENSG00000170515|Q9UQ80-2|PA2G4;PA2G4|p.K373Efs*19|1|0.43|ENSG00000170515|chr12:56111517-56111518|-/A|frameshift_variant;PA2G4|p.T200Pfs*58|1|0.29|ENSG00000170515|chr12:56109899-56109899|A/-|frameshift_variant	79.45101966838831	0.09992237243120712	2				NaN	NaN	0	NaN	9418	3941	13358
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13362	35.597	NaN	3656.4	30	0	486.27	0.034				-1	 	0	64	484.7283204799003	967.4420880266006	2	484.72857666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9419	3941	13358
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13373	35.623	NaN	14759	30	0	1977.2	0.214				-1	 	0	76	493.79706930344435	985.5795856736887	2	493.797607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9427	3944	13372
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13374	35.626	NaN	4547.1	30	0	292.35	0.106	+			46519	VEVVVTKL	8	58	443.7836049322716	885.5526569313432	2	443.7837829589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VEVVVTKL_	ENSG00000054219|ENST00000263636|LY75;ENST00000484559.1_1_2:160728960-160761235:-|nuORF;LY75|p.K1412Rfs*2|4|0.39|ENSG00000054219|chr2:159816951-159816951|T/-|frameshift_variant;LY75|p.Q1410Tfs*6|1|0.07|ENSG00000054219|chr2:159816959-159816960|-/GGGTT|frameshift_variant;LY75|p.W1325Ffs*24|1|0.14|ENSG00000054219|chr2:159819905-159819906|-/TTTAAAGTTATTGA|frameshift_variant;nc|ENSG00000054219|O60449-2|LY75;nc|ENSG00000054219|O60449-3|LY75	77.31757898189308	0.345924878368729	2				NaN	NaN	0	NaN	9428	3944	13372
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13375	35.628	NaN	4121.3	30	0	906.79	0.106	+			37775	SLVTVSWGAP	10	70	508.77372287720857	1015.5328928212172	2	508.7739562988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLVTVSWGAP_	PVRIG|p.G79Afs*245|1|0.24|ENSG00000213413|chr7:100220225-100220225|G/-|frameshift_variant	40.77816245573522	0.5419747034533848	2				NaN	NaN	0	NaN	9429	3944	13372
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13376	35.63	NaN	1723.1	30	0	196.31	0.106			+	37430	SLGVVPGSL	9	46	414.7462374181731	NaN	0	414.7484436035156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLGVVPGSL_	REV__ENSG00000153976|ENST00000284110|HS3ST3A1;REV__HS3ST3A1|p.T371Mfs*31|1|0.2|ENSG00000153976|chr17:13496306-13496307|-/ATGGATAACCA|frameshift_variant	51.33545320467046	0.19748963086191895	2				NaN	NaN	0	NaN	9430	3944	13372
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13377	35.632	NaN	2591.9	30	0	385.16	0.106			+	24717	LHLKVQDPK	9	68	539.3250568935581	NaN	0	539.3250732421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LHLKVQDPK_	REV__ENSG00000130449|ENST00000252744|ZSWIM6;REV__ZSWIM6|p.E613Rfs*5|1|0.2|ENSG00000130449|chr5:61526387-61526388|-/A|frameshift_variant;REV__ZSWIM6|p.E613Sfs*7|1|0.32|ENSG00000130449|chr5:61526388-61526388|A/-|frameshift_variant	29.170058357718403	0.3302935627494407	2				NaN	NaN	0	NaN	9431	3944	13372
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13378	35.634	NaN	1860.7	30	0	446.53	0.106	+			27920	MVAAGALASL	10	52	452.2520446777344	NaN	0	452.2520446777344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MVAAGALASL_	ISLR|p.T88M|2|0.18|ENSG00000129009|chr15:74175121-74175121|C/T|missense_variant	31.954861631926434	0.3952518850925832	2				NaN	NaN	0	NaN	9432	3944	13372
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13379	35.635	NaN	1522.6	30	0	123.83	0.033	+			48580	VTQLGSQL	8	48	423.2394102738077	NaN	0	423.2390441894531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VTQLGSQL_	ENSG00000150961|ENST00000280551|SEC24D;ENST00000514561.5_1_4:119681750-119745902:-|nuORF;nc|ENSG00000150961|O94855-2|SEC24D	59.93077597824379	1.7418937515398478	2				NaN	NaN	0	NaN	9433	3944	13372
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13390	35.661	NaN	4044.5	30	0	617.59	0.214			+	47219	VMFVHKEI	8	68	501.77731764817787	1001.5400823631558	2	502.27874755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VMFVHKEI_	REV__ANKRD27|p.V858M|1|0.26|ENSG00000105186|chr19:32604346-32604346|C/T|missense_variant	47.91560031466742	0.6071945918984287	2				NaN	NaN	0	NaN	9441	3947	13389
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13391	35.664	NaN	1380.1	30	0	223.73	0.106			+	11899	FTTTAGRI	8	47	433.7397766113281	NaN	0	433.7397766113281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FTTTAGRI_	REV__ENSG00000143196|ENST00000367817|DPT	25.450171626174864	1.7418937515398478	2				NaN	NaN	0	NaN	9442	3947	13389
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13392	35.666	NaN	1894.4	30	0	522.51	0.106			+	48372	VTHFIRKIS	9	43	367.5568771825108	1099.6488021477323	3	367.5572509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTHFIRKIS_	REV__ENSG00000100353|ENST00000216190|EIF3D;REV__nc|ENSG00000100353|O15371-2|EIF3D;REV__nc|ENSG00000100353|O15371-3|EIF3D	25.57405402267927	0.5642445186134241	2				NaN	NaN	0	NaN	9443	3947	13389
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13393	35.668	NaN	919.32	30	0	127.4	0.038	+			17107	HSHKNNLFET	10	49	613.7977012958828	1225.5808496585655	2	613.796630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HSHKNNLFET_	MFGE8|p.K355N|1|0.04|ENSG00000140545|chr15:88899494-88899494|C/A|missense_variant	29.170058357718403	0.6416167986984785	2				NaN	NaN	0	NaN	9444	3947	13389
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13404	35.693	NaN	44646	30	0	8319.7	0.214	+			3839	ATALEYVYK	9	83	529.2809581813259	1056.5473634294517	2	529.282470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATALEYVYK_	ENSG00000135441|ENST00000548925|BLOC1S1;ENST00000549147.1_1_12:56113198-56113390:+|nuORF;nc|ENSG00000135441|P78537-2|BLOC1S1	132.757866228626	0.013877640931359021	2				NaN	NaN	0	NaN	9452	3950	13403
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13405	35.697	NaN	7430.6	30	0	879.58	0.106	+			38713	SSLDVNVLK	9	72	487.7793418821233	NaN	0	487.7793273925781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSLDVNVLK_	ENSG00000179562|ENST00000321407|GCC1;GCC1|p.T633Afs*8|1|0.05|ENSG00000179562|chr7:127582446-127582447|-/CA|frameshift_variant	106.68306549817024	0.012692596758972883	2				NaN	NaN	0	NaN	9453	3950	13403
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13406	35.699	NaN	9116.6	30	0	1179.5	0.106	+			17517	IDKYTEVL	8	77	490.76886245869866	979.5231719841973	2	490.76873779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IDKYTEVL_	ENSG00000142541|ENST00000391857|RPL13A;ENST00000425147.1_1_21:26734448-26734742:+|nuORF	56.72105179125745	0.5342425954139568	2				NaN	NaN	0	NaN	9454	3950	13403
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13407	35.701	NaN	6102.8	30	0	1368.2	0.106	+			40692	SVATVVYLR	9	73	504.29803966015834	NaN	0	504.298095703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVATVVYLR_	ENSG00000132383|ENST00000254719|RPA1	115.49404669440601	0.004735551190337385	2				NaN	NaN	0	NaN	9455	3950	13403
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13408	35.702	NaN	2953.6	30	0	410.28	0.106	+			34843	RYQDAIRVF	9	53	584.3164820283056	1166.618411123411	2	584.3172607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RYQDAIRVF_	EIF3L|p.A337T|1|0.18|ENSG00000100129|chr22:37875943-37875943|G/A|missense_variant;ENSG00000100129|ENST00000652021|EIF3L;ENST00000457262.1_1_10:43062145-43062928:+|nuORF;nc|ENSG00000100129|Q9Y262-2|EIF3L	25.125986553469783	0.568431947241088	2				NaN	NaN	0	NaN	9456	3950	13403
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13409	35.704	NaN	1775.1	30	0	164.85	0.033	+			46108	VDGKGYLL	8	48	432.7442901732268	863.4740274132536	2	432.7446594238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VDGKGYLL_	ENSG00000125347|ENST00000245414|IRF1;ENST00000472045.1_1_5:131819943-131820240:-|nuORF	68.484700416344	0.4195245774506064	2				NaN	NaN	0	NaN	9457	3950	13403
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13410	35.705	NaN	4163.4	30	0	457.05	0.14	+			14179	GSQFFITTK	9	63	514.773968162536	1027.533383391872	2	514.774658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GSQFFITTK_	ENSG00000114857|ENST00000232978|NKTR;ENSG00000138398|ENST00000260970|PPIG;nc|ENSG00000138398|Q13427-2|PPIG;NKTR|p.K429Nfs*37|1|0.2|ENSG00000114857|chr3:42636986-42636986|A/-|frameshift_variant;NKTR|p.N670Ifs*43|1|0.14|ENSG00000114857|chr3:42637707-42637707|A/-|frameshift_variant;NKTR|p.R859Kfs*9|1|0.28|ENSG00000114857|chr3:42638271-42638272|-/A|frameshift_variant;NKTR|p.S692Ffs*17|1|0.1|ENSG00000114857|chr3:42637779-42637791|CAAGGAGCAGATC/-|frameshift_variant;PPIG|p.N420Mfs*33|1|0.4|ENSG00000138398|chr2:169636512-169636512|A/-|frameshift_variant	122.93914200107957	0.019420478173996256	2				NaN	NaN	0	NaN	9458	3950	13403
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13422	35.732	NaN	9565.2	30	0	1414.9	0.214	+			50650	YEDLTQVL	8	82	490.74976620092895	NaN	0	490.7500915527344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YEDLTQVL_	ENST00000216039.9_1_22:39083550-39083643:-|nuORF	87.69643885390035	1.7418937515398478	2				NaN	NaN	0	NaN	9467	3953	13421
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13423	35.736	NaN	5422.2	30	0	399.06	0.106			+	37009	SIQFGKEVY	9	79	535.7786014853707	1069.5426500375413	2	536.280029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SIQFGKEVY_	REV__ENSG00000139974|ENST00000267488|SLC38A6;REV__ENST00000527591.5_1_14:61453838-61514994:+|nuORF;REV__ENST00000529345.6_1_14:61448346-61550389:+|nuORF;REV__nc|ENSG00000139974|Q8IZM9-2|SLC38A6;REV__SLC38A6|p.L372*|1|0.38|ENSG00000139974|chr14:61051846-61051846|T/-|frameshift_variant;REV__SLC38A6|p.L372Ffs*19|1|0.42|ENSG00000139974|chr14:61051845-61051846|-/T|frameshift_variant	32.81241826257853	0.4965981579233955	2				NaN	NaN	0	NaN	9468	3953	13421
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13424	35.738	NaN	2737.5	30	0	423.75	0.106	+			10878	FCACAVGLIAV	11	71	533.7757276449269	1065.5369023566536	2	533.7765502929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FCACAVGLIAV_	CD63|p.A47Lfs*37|1|0.14|ENSG00000135404|chr12:55727267-55727267|C/-|frameshift_variant;ENSG00000135404|ENST00000257857|CD63	50.0245360154114	0.4207767895280948	2				NaN	NaN	0	NaN	9469	3953	13421
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13425	35.739	NaN	3300	30	0	599.29	0.106	+			50303	WSPSHGAL	8	54	427.71093754935976	853.4073221655195	2	427.7115173339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_WSPSHGAL_	ADAMTSL2|p.H950Tfs*?|1|0.45|ENSG00000197859|chr9:133574850-133574850|C/-|frameshift_variant	44.53106598305862	0.628196326904373	2				NaN	NaN	0	NaN	9470	3953	13421
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13426	35.741	NaN	812.51	30	0	81.7	0.106			+	8199	EADALVALN	9	41	458.24298095703125	NaN	0	458.24298095703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EADALVALN_	REV__ENSG00000116685|ENST00000376572|KIAA2013;REV__nc|ENSG00000116685|Q8IYS2-2|KIAA2013	34.172542307311794	0.30503706118289736	2				NaN	NaN	0	NaN	9471	3953	13421
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13427	35.743	NaN	1752.8	30	0	179.12	0.034			+	50096	WGQEVQEA	8	60	473.7182930702769	NaN	0	473.718505859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_WGQEVQEA_	REV__ENSG00000136002|ENST00000409359|ARHGEF4	40.77816245573522	1.7418937515398478	2				NaN	NaN	0	NaN	9472	3953	13421
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13428	35.744	NaN	2585.4	30	0	298.24	0.139			+	45792	VAGTPLRTL	9	56	464.28400089061125	926.5534488480225	2	464.2845153808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VAGTPLRTL_	REV__ENST00000596221.1_1_19:50920282-50921201:+|nuORF	47.657333605630114	0.33044192980041115	2				NaN	NaN	0	NaN	9473	3953	13421
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13441	35.773	NaN	2064.2	30	0	214.67	0.214	+			26561	LTSNFAKSV	9	70	483.766256091854	NaN	0	483.7660827636719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LTSNFAKSV_	ADAM11|p.D614Tfs*33|1|0.15|ENSG00000073670|chr17:44777537-44777537|G/-|frameshift_variant;ADAM11|p.G347Afs*11|1|0.26|ENSG00000073670|chr17:44774337-44774337|G/-|frameshift_variant;ENSG00000073670|ENST00000200557|ADAM11;nc|ENSG00000073670|O75078-2|ADAM11	47.657333605630114	0.2228375344433429	2				NaN	NaN	0	NaN	9483	3956	13440
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13442	35.776	NaN	2737.2	30	0	332.32	0.106	+			25476	LPSAATLRY	9	63	496.28147857422795	990.5484042152559	2	496.28173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LPSAATLRY_	ENSG00000167608|ENST00000619895|TMC4;nc|ENSG00000167608|Q7Z404-1|TMC4;nc|ENSG00000167608|Q7Z404|TMC4;TMC4|p.F240Lfs*221|1|0.42|ENSG00000167608|chr19:54168267-54168268|AA/-|frameshift_variant;TMC4|p.Q383Rfs*6|1|0.37|ENSG00000167608|chr19:54163872-54163872|G/-|frameshift_variant	67.49366992349736	0.1516260258713357	2				NaN	NaN	0	NaN	9484	3956	13440
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13443	35.778	NaN	1207.3	30	0	112.43	0.106	+			38644	SSIDPSLLSTK	11	55	574.3135420782968	1146.6125312233935	2	574.3143920898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSIDPSLLSTK_	ENSG00000134369|ENST00000685211|NAV1;NAV1|p.K1211Efs*5|1|0.68|ENSG00000134369|chr1:201803700-201803701|AA/-|frameshift_variant;nc|ENSG00000134369|Q8NEY1-2|NAV1;nc|ENSG00000134369|Q8NEY1-3|NAV1;nc|ENSG00000134369|Q8NEY1-4|NAV1;nc|ENSG00000134369|Q8NEY1-5|NAV1;nc|ENSG00000134369|Q8NEY1-6|NAV1;nc|ENSG00000134369|Q8NEY1-7|NAV1;nc|ENSG00000134369|Q8NEY1|NAV1	60.1669710687717	0.32196467475348695	2				NaN	NaN	0	NaN	9485	3956	13440
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13444	35.78	NaN	3040.6	30	0	142.76	0.106	+			51143	YNVLLFVDG	9	71	520.2751489365847	NaN	0	520.276123046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YNVLLFVDG_	ENSG00000111581|ENST00000229179|NUP107;nc|ENSG00000111581|P57740-2|NUP107;nc|ENSG00000111581|P57740-3|NUP107	29.14955571784316	0.3303970763161698	2				NaN	NaN	0	NaN	9486	3956	13440
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13445	35.782	NaN	1444.6	30	0	268.68	0.106			+	47116	VLNFGFSDAF	10	60	558.7703247070312	NaN	0	558.7703247070312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VLNFGFSDAF_	REV__ENSG00000154415|ENST00000284601|PPP1R3A;REV__PPP1R3A|p.K469Nfs*11|1|0.33|ENSG00000154415|chr7:113879685-113879685|T/-|frameshift_variant;REV__PPP1R3A|p.K861Nfs*74|1|0.35|ENSG00000154415|chr7:113878509-113878509|T/-|frameshift_variant;REV__PPP1R3A|p.N476Kfs*4|1|0.28|ENSG00000154415|chr7:113879664-113879664|A/-|frameshift_variant;REV__PPP1R3A|p.R560Kfs*46|1|0.14|ENSG00000154415|chr7:113879413-113879414|-/T|frameshift_variant	30.503639358989545	0.4000169810673414	2				NaN	NaN	0	NaN	9487	3956	13440
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13446	35.784	NaN	934.5	30	0	134.16	0.106			+	-1	KDVSCTAI	8	40	447.2220708788031	892.4295888244062	2	447.2223815917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_KDVSC(Carbamidomethyl (C))TAI_	REV__APAF1|p.E1208Gfs*14|1|0.23|ENSG00000120868|chr12:98732437-98732438|-/G|frameshift_variant;REV__APAF1|p.F787Sfs*2|1|0.33|ENSG00000120868|chr12:98699461-98699461|C/-|frameshift_variant;REV__ENSG00000120868|ENST00000551964|APAF1;REV__nc|ENSG00000120868|O14727-2|APAF1;REV__nc|ENSG00000120868|O14727-3|APAF1;REV__nc|ENSG00000120868|O14727-4|APAF1;REV__nc|ENSG00000120868|O14727-5|APAF1	49.44154591367651	0.597725784090933	2				NaN	NaN	0	NaN	9488	3956	13440
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13447	35.785	NaN	1304.3	30	0	262.38	0.033				-1	 	0	49	436.77553125523735	871.5365095772747	2	436.776123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9489	3956	13440
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13459	35.811	NaN	12336	30	0	3200.1	0.214			+	10862	FAVAIKNVN	9	64	488.28379952071487	974.5530461082298	2	488.28466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FAVAIKNVN_	REV__ENSG00000174776|ENST00000682715|WDR49;REV__WDR49|p.K607Nfs*9|2|0.38|ENSG00000174776|chr3:167505314-167505314|T/-|frameshift_variant	31.954861631926434	0.5046124803899898	2				NaN	NaN	0	NaN	9498	3959	13458
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13460	35.815	NaN	10321	30	0	2713.5	0.106				-1	 	0	58	466.2711670079034	930.5277810826068	2	466.27154541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9499	3959	13458
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13461	35.817	NaN	5575.8	30	0	549.57	0.106	+			42304	TAFDVAEKY	9	65	522.2549859443943	1042.4954189555885	2	522.2564086914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TAFDVAEKY_	ENSG00000072110|ENST00000394419|ACTN1;ENST00000554508.5_1_14:69367621-69387744:-|nuORF;nc|ENSG00000072110|P12814-2|ACTN1;nc|ENSG00000072110|P12814-4|ACTN1;nc|ENSG00000072110|P12814|ACTN1	85.86182877749512	0.07653218437724067	2				NaN	NaN	0	NaN	9500	3959	13458
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13462	35.818	NaN	8517.7	30	0	1251.8	0.106				-1	 	0	66	532.820327757541	1063.626102581882	2	532.8217163085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9501	3959	13458
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13463	35.82	NaN	4538.4	30	0	855.19	0.106			+	33634	RLVPCYQH	8	65	508.26070632957305	1014.5068597259461	2	508.2637634277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RLVPCYQH_	REV__BACH2|p.R728Q|1|0.2|ENSG00000112182|chr6:89932751-89932751|C/T|missense_variant	38.80614096846853	0.6637206697844082	2				NaN	NaN	0	NaN	9502	3959	13458
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13464	35.822	NaN	2407.5	30	0	301.28	0.034			+	13633	GMIFPKGVL	9	58	481.2808859272428	960.5472189212857	2	481.2821350097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GMIFPKGVL_	REV__tr|U7SMN1|U7SMN1_FUSNUCof-likehydrolaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01756PE=4SV=1	47.91560031466742	0.327412564698279	2				NaN	NaN	0	NaN	9503	3959	13458
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13465	35.823	NaN	8511.2	30	0	1128.6	0.14	+			42984	TEKIISAEL	9	74	502.2867084411688	1002.5588639491376	2	502.2875671386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TEKIISAEL_	ENSG00000073614|ENST00000399788|KDM5A;nc|ENSG00000073614|P29375-2|KDM5A	104.01359247289065	0.03510646158778409	2				NaN	NaN	0	NaN	9504	3959	13458
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13476	35.849	NaN	8083.8	30	0	679.32	0.214	+			28085	NAFEVAEKY	9	79	535.7605312608235	1069.506509588447	2	535.7618408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAFEVAEKY_	ENSG00000130402|ENST00000252699|ACTN4;ENST00000588618.5_1_19:39138385-39212431:+|nuORF	122.93914200107957	0.019420478173996256	2				NaN	NaN	0	NaN	9512	3962	13475
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13477	35.853	NaN	5095.5	30	0	957.1	0.106	+			28572	NKGMFPGFK	9	67	513.266099003661	1024.517645074122	2	513.2669067382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NKGMFPGFK_	ENSG00000136492|ENST00000259008|BRIP1	49.44154591367651	0.3095138337212152	2				NaN	NaN	0	NaN	9513	3962	13475
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13478	35.855	NaN	3882.4	30	0	557.46	0.106				-1	FPSNCMYL	8	69	516.2206815666136	1030.4268102000271	2	515.722900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_FPSNC(Carbamidomethyl (C))MYL_	ENST00000303045.10_2_8:139926021-139926222:-|nuORF	52.29916861842294	0.578018602984656	2				NaN	NaN	0	NaN	9514	3962	13475
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13479	35.857	NaN	2020.2	30	0	352.97	0.106	+			29449	PCLKVMHK	8	61	478.26554338272973	954.5165338322595	2	478.2662658691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PCLKVMHK_	RYR3|p.T1272M|1|0.25|ENSG00000198838|chr15:33646400-33646400|C/T|missense_variant	44.53106598305862	0.628196326904373	2				NaN	NaN	0	NaN	9515	3962	13475
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13480	35.859	NaN	2225.2	30	0	296.21	0.106			+	9610	ELMFRIRT	8	66	541.2939050139275	NaN	0	541.2930297851562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_ELM(Oxidation (M))FRIRT_	REV__ENSG00000146909|ENST00000275820|NOM1	68.78682469695295	1.7418937515398478	2				NaN	NaN	0	NaN	9516	3962	13475
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13481	35.86	NaN	2072.5	30	0	314.76	0.036	+			42675	TAYWMPAEK	9	50	548.7601725795644	1095.5057922259286	2	548.760498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TAYWMPAEK_	ENSG00000121316|ENST00000240617|PLBD1;PLBD1|p.N214Tfs*4|1|0.06|ENSG00000121316|chr12:14536628-14536628|T/-|frameshift_variant;PLBD1|p.Y42H|1|0.35|ENSG00000121316|chr12:14553404-14553404|A/G|missense_variant	41.42661286455405	0.403525789677298	2				NaN	NaN	0	NaN	9517	3962	13475
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13492	35.886	NaN	7012.5	30	0	928.72	0.214	+			45553	TYLEKAVEV	9	82	526.2859115760633	NaN	0	526.2874145507812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TYLEKAVEV_	ATM|p.G2425Vfs*15|1|0.33|ENSG00000149311|chr11:108329204-108329204|G/-|frameshift_variant;ATM|p.K2413Tfs*11|1|0.06|ENSG00000149311|chr11:108329168-108329169|-/CAACCAATTTAAATTAT|frameshift_variant;ATM|p.K2811Sfs*46|1|0.34|ENSG00000149311|chr11:108345750-108345750|A/-|frameshift_variant;ENSG00000149311|ENST00000675843|ATM;ENST00000524792.5_1_11:108158320-108236232:+|nuORF;ENST00000527389.2_1_11:108198407-108199966:+|nuORF	88.17693792209575	0.04527150213038833	2				NaN	NaN	0	NaN	9525	3965	13491
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13493	35.889	NaN	3067.8	30	0	605.88	0.106				-1	 	0	40	352.7078642872727	703.4011756413454	2	352.7081604003906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9526	3965	13491
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13494	35.891	NaN	3562.6	30	0	1324.2	0.106				-1	 	0	52	379.20925562573456	756.4039583182691	2	379.2095947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9527	3965	13491
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13495	35.893	NaN	3220.8	30	0	384.04	0.106	+			11502	FPDKPITQY	9	62	554.7868170656611	1107.5590811981222	2	555.29150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FPDKPITQY_	ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656-2|DDOST;nc|ENSG00000244038|P39656-3|DDOST;nc|ENSG00000244038|P39656|DDOST	49.536043120802724	0.308405419312776	2				NaN	NaN	0	NaN	9528	3965	13491
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13496	35.895	NaN	3427.1	30	0	304.49	0.106	+			34202	RTDNISFMLK	10	75	612.8238119916667	1223.6330710501334	2	612.8240356445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RTDNISFMLK_	ENSG00000162434|ENST00000342505|JAK1;JAK1|p.K860Nfs*16|3|0.29|ENSG00000162434|chr1:64841314-64841314|T/-|frameshift_variant	136.98908636845044	0.01155686115611441	2				NaN	NaN	0	NaN	9529	3965	13491
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13497	35.897	NaN	2697	30	0	961.86	0.106			+	26579	LTTNTLIT	8	51	438.7549968454423	875.4954407576846	2	438.7554016113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LTTNTLIT_	REV__ENST00000400227.7_1_20:469349-469382:-|nuORF	76.7741389293348	0.3504530765139327	2				NaN	NaN	0	NaN	9530	3965	13491
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13498	35.898	NaN	4599.6	30	0	383.52	0.034	+			234	AAMKALQAL	9	56	458.7671207404956	915.5196885477912	2	458.7674255371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AAMKALQAL_	ENSG00000040341|ENST00000524300|STAU2;ENST00000521451.5_1_8:74528012-74659064:-|nuORF;nc|ENSG00000040341|Q9NUL3-2|STAU2;nc|ENSG00000040341|Q9NUL3-3|STAU2;nc|ENSG00000040341|Q9NUL3-7|STAU2;nc|ENSG00000040341|Q9NUL3-8|STAU2;STAU2|p.C491Lfs*31|1|0.39|ENSG00000040341|chr8:73552072-73552073|-/G|frameshift_variant;STAU2|p.K274Nfs*22|1|0.09|ENSG00000040341|chr8:73613813-73613813|T/-|frameshift_variant;STAU2|p.K410Ifs*9|1|0.07|ENSG00000040341|chr8:73552313-73552314|-/A|frameshift_variant;STAU2|p.L259Tfs*15|2|0.48|ENSG00000040341|chr8:73613860-73613861|-/T|frameshift_variant	68.78682469695295	0.14603441672067394	2				NaN	NaN	0	NaN	9531	3965	13491
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13510	35.924	NaN	12770	30	0	1543	0.214	+			41546	SVQDVIYVR	9	73	539.7976008025154	1077.5806486718307	2	539.7987060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVQDVIYVR_	ENSG00000099282|ENST00000373290|TSPAN15	143.37361013837676	0.008897369944672323	2				NaN	NaN	0	NaN	9540	3968	13509
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13511	35.927	NaN	9074.2	30	0	1114.2	0.106	+			34945	SAAKLLTEY	9	65	498.2733516970554	994.5321504609108	2	498.273681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAAKLLTEY_	ENSG00000189221|ENST00000338702|MAOA;MAOA|p.G405Afs*12|1|0.26|ENSG00000189221|chrX:43741995-43741995|G/-|frameshift_variant	112.10723106719422	0.02684780151337622	2				NaN	NaN	0	NaN	9541	3968	13509
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13512	35.929	NaN	4358.9	30	0	640.25	0.106			+	2471	APLLHGPA	8	59	388.22631461207067	774.4380762909414	2	388.22637939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_APLLHGPA_	REV__CNNM2|p.W228Vfs*183|1|0.44|ENSG00000148842|chr10:102919155-102919156|-/C|frameshift_variant	43.626045697637714	0.6338121648150432	2				NaN	NaN	0	NaN	9542	3968	13509
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13513	35.931	NaN	3139.2	30	0	306.86	0.106	+			2963	ASFCGAVFR	9	57	507.7448752045659	NaN	0	507.7445373535156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_ASFC(Carbamidomethyl (C))GAVFR_	ENSG00000125676|ENST00000245838|THOC2;THOC2|p.L784Ffs*4|1|0.3|ENSG00000125676|chrX:123631817-123631818|-/A|frameshift_variant	42.396135135203025	0.2590952873412954	2				NaN	NaN	0	NaN	9543	3968	13509
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13514	35.933	NaN	1853.5	30	0	180.92	0.106			+	21128	KKSKFAEA	8	53	454.76325296833693	NaN	0	454.76336669921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KKSKFAEA_	REV__ENSG00000000005|ENST00000373031|TNMD;REV__nc|ENSG00000000005|Q9H2S6-2|TNMD;REV__TNMD|p.A61Sfs*3|1|0.3|ENSG00000000005|chrX:100585356-100585357|-/A|frameshift_variant	40.77816245573522	1.7418937515398478	2				NaN	NaN	0	NaN	9544	3968	13509
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13515	35.935	NaN	2894.4	30	0	660.4	0.037	+			23929	LDPNRVLDVI	10	68	577.3320314643385	1152.6495099954768	2	577.3328247070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LDPNRVLDVI_	ENSG00000125676|ENST00000245838|THOC2;THOC2|p.L784Ffs*4|1|0.3|ENSG00000125676|chrX:123631817-123631818|-/A|frameshift_variant	50.033510581677724	0.4566913063131936	2				NaN	NaN	0	NaN	9545	3968	13509
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13516	35.935	NaN	3685	30	0	306.09	0.141	+			10451	EVNKFQMAY	9	63	565.2705553748947	1128.5265578165893	2	565.2714233398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EVNKFQMAY_	ENSG00000140319|ENST00000267884|SRP14	147.69337715509954	0.007406765731929437	2				NaN	NaN	0	NaN	9546	3968	13509
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13528	35.963	NaN	20286	30	0	4174.8	0.214	+			24340	LFLCRWVS	8	74	512.2762353907749	1022.5379178483498	2	512.27685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LFLCRWVS_	ENST00000476954.1_1_1:156220380-156221068:-|nuORF	60.29395666154354	0.49887135096048313	2				NaN	NaN	0	NaN	9555	3971	13527
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13529	35.966	NaN	2565.2	30	0	269.8	0.106	+			11503	FPDKPITQY	9	64	554.7868170656611	1107.5590811981222	2	554.7870483398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FPDKPITQY_	ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656-2|DDOST;nc|ENSG00000244038|P39656-3|DDOST;nc|ENSG00000244038|P39656|DDOST	54.722347961057174	0.257609425301511	2				NaN	NaN	0	NaN	9556	3971	13527
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13530	35.968	NaN	2349	30	0	231.09	0.106			+	26487	LTLSQAPI	8	51	421.7522545555564	841.4899561779129	2	421.7526550292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LTLSQAPI_	REV__ENSG00000110171|ENST00000345851|TRIM3;REV__ENST00000536344.5_1_11:6479060-6495064:-|nuORF;REV__nc|ENSG00000110171|O75382-2|TRIM3;REV__nc|ENSG00000110171|O75382-3|TRIM3	66.42927471994793	0.4381325844043345	2				NaN	NaN	0	NaN	9557	3971	13527
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13531	35.97	NaN	6676.3	30	0	2471	0.106				-1	MDTVRTLCS	9	61	549.7491823816051	1097.4838118300102	2	549.7500610351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))DTVRTLC(Carbamidomethyl (C))S_	ENSG00000105339|ENST00000519811|DENND3;nc|ENSG00000105339|A2RUS2-2|DENND3;nc|ENSG00000105339|A2RUS2|DENND3	56.72105179125745	0.24094814563026265	2				NaN	NaN	0	NaN	9558	3971	13527
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13532	35.972	NaN	1693.1	30	0	187.88	0.106	+			37507	SLLGAVGLAAV	11	63	485.7999157629978	NaN	0	485.8001708984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SLLGAVGLAAV_	ENSG00000089199|ENST00000378961|CHGB	42.396135135203025	0.3699325281549567	2				NaN	NaN	0	NaN	9559	3971	13527
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13533	35.974	NaN	2716.1	30	0	404.47	0.034			+	25793	LSASPVYVL	9	57	474.7732528623193	947.5319527914386	2	474.77349853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSASPVYVL_	REV__E2F7|p.P729Lfs*53|1|0.24|ENSG00000165891|chr12:77025937-77025937|G/-|frameshift_variant;REV__ENSG00000165891|ENST00000322886|E2F7;REV__nc|ENSG00000165891|Q96AV8-2|E2F7;REV__nc|ENSG00000165891|Q96AV8-3|E2F7	45.9519527083369	0.35044536499095585	2				NaN	NaN	0	NaN	9560	3971	13527
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13534	35.974	NaN	4270.4	30	0	458.86	0.141			+	996	AEKKNSILY	9	70	533.2999974388661	1064.585441944532	2	533.3015747070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AEKKNSILY_	REV__DBF4|p.Q616Vfs*9|1|0.36|ENSG00000006634|chr7:87907983-87907984|AC/-|frameshift_variant;REV__ENSG00000006634|ENST00000265728|DBF4;REV__ENST00000486925.1_1_7:87505915-87514494:+|nuORF;REV__nc|ENSG00000006634|Q9UBU7-2|DBF4	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	9561	3971	13527
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13546	36.002	NaN	12998	30	0	1247.7	0.214	+			36241	SEMKLVQM	8	78	483.24249300801324	964.4704330828265	2	483.2435607910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEMKLVQM_	ENSG00000008838|ENST00000394128|MED24;MED24|p.E720Gfs*14|1|0.41|ENSG00000008838|chr17:40023224-40023225|-/A|frameshift_variant;MED24|p.K704Sfs*8|1|0.18|ENSG00000008838|chr17:40023272-40023272|G/-|frameshift_variant;MED24|p.P805Rfs*53|1|0.29|ENSG00000008838|chr17:40022663-40022663|G/-|frameshift_variant;nc|ENSG00000008838|O75448-2|MED24;THRA-MED24|1|fusion	113.41158876095287	0.24327961457765637	2				NaN	NaN	0	NaN	9570	3974	13545
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13547	36.005	NaN	11771	30	0	1358.2	0.106	+			45183	TVMNIAEHY	9	78	539.2543428842781	1076.4941328353561	2	539.2557983398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVMNIAEHY_	ENSG00000106263|ENST00000360876|EIF3B;ENST00000475415.5_1_7:2414943-2418434:+|nuORF;nc|ENSG00000106263|P55884-2|EIF3B	93.1432384553994	0.056003526918089595	2				NaN	NaN	0	NaN	9571	3974	13545
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13548	36.007	NaN	15895	30	0	3873.1	0.106	+			18048	IISTVEVLK	9	74	501.3153543988878	1000.6161558645756	2	501.3155822753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IISTVEVLK_	ENSG00000141279|ENST00000322157|NPEPPS;ENST00000530514.5_1_17:45668242-45699283:+|nuORF;ENST00000531486.1_1_17:45681241-45696545:+|nuORF;nc|ENSG00000141279|P55786-2|NPEPPS	80.45461616416974	0.09558281504443908	2				NaN	NaN	0	NaN	9572	3974	13545
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13549	36.009	NaN	8046.6	30	0	1563.7	0.106			+	7442	DFEVDPFY	8	69	516.2206815666136	1030.4268102000271	2	516.2208862304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DFEVDPFY_	REV__AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;REV__ENSG00000124942|ENST00000378024|AHNAK	54.76467175910256	0.5536104764165384	2				NaN	NaN	0	NaN	9573	3974	13545
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13550	36.011	NaN	7026.7	30	0	1523.7	0.106	+			14424	GTAQLTLLH	9	65	477.27396951665605	952.5333861001121	2	477.2742004394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTAQLTLLH_	ENSG00000254470|ENST00000532090|AP5B1;ENST00000316846.2_11:65545618-65547282:-|nuORF	171.53180478179638	0.0025054460641941692	2				NaN	NaN	0	NaN	9574	3974	13545
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13551	36.012	NaN	2908.4	30	0	231.6	0.035				-1	AVAVGRPSNE	10	65	521.2720878405355	1040.529622747871	2	521.2730712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))AVAVGRPSNE_	ENSG00000138758|ENST00000264893|SEPTIN11	45.97224482568171	0.49411383603842696	2				NaN	NaN	0	NaN	9575	3974	13545
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13552	36.013	NaN	2032	30	0	309.59	0.141	+			11412	FLQLPHQDS	9	60	542.7739054498918	1083.5332579665835	2	542.7748413085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FLQLPHQDS_	CCDC88A|p.L1472Ffs*8|1|0.35|ENSG00000115355|chr2:55303124-55303125|-/A|frameshift_variant;ENSG00000115355|ENST00000436346|CCDC88A;nc|ENSG00000115355|Q3V6T2-2|CCDC88A;nc|ENSG00000115355|Q3V6T2-3|CCDC88A;nc|ENSG00000115355|Q3V6T2-4|CCDC88A;nc|ENSG00000115355|Q3V6T2-5|CCDC88A	26.063383197487333	0.5596714774181829	2				NaN	NaN	0	NaN	9576	3974	13545
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13563	36.04	NaN	7185.7	30	0	593.74	0.214	+			3840	ATALEYVYK	9	83	529.2809581813259	1056.5473634294517	2	529.2824096679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATALEYVYK_	ENSG00000135441|ENST00000548925|BLOC1S1;ENST00000549147.1_1_12:56113198-56113390:+|nuORF;nc|ENSG00000135441|P78537-2|BLOC1S1	82.7504851949679	0.08565546331141553	2				NaN	NaN	0	NaN	9584	3977	13562
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13564	36.044	NaN	2409	30	0	432.89	0.106	+			664	AEAIIHGL	8	51	412.2365910381143	822.4586291430286	2	412.2369079589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEAIIHGL_	ENSG00000147601|ENST00000276603|TERF1;ENST00000583350.1_1_18:14377547-14378720:-|nuORF;nc|ENSG00000147601|P54274-2|TERF1	74.51659920185547	0.36926395944126233	2				NaN	NaN	0	NaN	9585	3977	13562
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13565	36.046	NaN	6193.5	30	0	1840.1	0.106				-1	 	0	55	447.2576144011064	892.5006758690129	2	447.2577209472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9586	3977	13562
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13566	36.047	NaN	1507.2	30	0	521.82	0.106				-1	AGKRRAPCP	9	32	338.18681857858763	1011.5386263359629	3	338.18701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_AGKRRAPC(Carbamidomethyl (C))P_	ENST00000360565.7_2_19:50161652-50161889:+|nuORF	35.61828744233558	0.47037581924408073	2				NaN	NaN	0	NaN	9587	3977	13562
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13567	36.049	NaN	3089.2	30	0	406.69	0.106	+			17799	IETTKVEML	9	63	532.2880614521436	1062.561569971087	2	532.2898559570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IETTKVEML_	ENSG00000125450|ENST00000245544|NUP85;ENST00000579900.5_1_17:73231554-73231771:+|nuORF;nc|ENSG00000125450|Q9BW27-3|NUP85	47.95952297671804	0.32689736945648856	2				NaN	NaN	0	NaN	9588	3977	13562
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13568	36.051	NaN	2141.9	30	0	234.2	0.106	+			47733	VSGGILGII	9	43	414.7624603548613	827.5103677765226	2	414.762939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VSGGILGII_	tr|U7SLP3|U7SLP3_FUSNUV-typeATPsynthasesubunitIOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02120PE=3SV=1	42.47446043378293	0.39123495718708534	2				NaN	NaN	0	NaN	9589	3977	13562
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13569	36.053	NaN	1785.8	30	0	445.24	0.035			+	15884	GYSFNQSAL	9	61	493.73163058037886	985.4487082275577	2	493.7318115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GYSFNQSAL_	REV__ENSG00000087299|ENST00000267436|L2HGDH;REV__nc|ENSG00000087299|Q9H9P8-2|L2HGDH	34.172542307311794	0.4838870758800184	2				NaN	NaN	0	NaN	9590	3977	13562
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13580	36.078	NaN	18726	30	0	10293	0.214				-1	 	0	69	506.7579703495104	1011.5013877658208	2	506.7584228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9598	3980	13579
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13581	36.082	NaN	4418.5	30	0	1063.1	0.106	+			25501	LPSKEAITV	9	62	479.2837615082099	956.5529700832199	2	479.2841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LPSKEAITV_	ENSG00000198001|ENST00000613694|IRAK4	62.107414245175825	0.1960472003779324	2				NaN	NaN	0	NaN	9599	3980	13579
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13582	36.084	NaN	1259.8	30	0	217.29	0.106			+	-1	PLYFALMVC	9	66	557.2762895035406	1112.5380260738812	2	557.2774658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_PLYFALMVC(Carbamidomethyl (C))_	REV__ENSG00000277932|ENST00000610445|OR52E5	49.21078951299608	0.3122205139198386	2				NaN	NaN	0	NaN	9600	3980	13579
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13583	36.085	NaN	3490.1	30	0	321.65	0.106			+	25872	LSFNGNLCLP	10	69	539.2721805755801	1076.5298082179602	2	539.2750854492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSFNGNLCLP_	REV__ENSG00000171532|ENST00000302584|NEUROD2	56.72105179125745	0.3956618550748046	2				NaN	NaN	0	NaN	9601	3980	13579
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13584	36.087	NaN	1490	30	0	266.15	0.106			+	47544	VQWCESVCLA	10	54	569.2577367794053	1136.5009206256104	2	569.7603759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VQWCESVCLA_	REV__GLIS1|p.L553Cfs*97|2|0.21|ENSG00000174332|chr1:53509168-53509168|G/-|frameshift_variant	29.14955571784316	0.6417842315402807	2				NaN	NaN	0	NaN	9602	3980	13579
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13585	36.089	NaN	3246.7	30	0	1230	0.106	+			30930	QELLKTEAL	9	68	522.7993604009188	1043.5841678686375	2	522.7997436523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QELLKTEAL_	ENSG00000167657|ENST00000545797|DAPK3;ENST00000595279.1_1_19:3959101-3961233:-|nuORF	52.936696900407355	0.27249468807391813	2				NaN	NaN	0	NaN	9603	3980	13579
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13586	36.091	NaN	1583.1	30	0	148.66	0.035			+	-1	MSVAIIPVY	9	59	525.7831659016078	NaN	0	525.78271484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))M(Oxidation (M))SVAIIPVY_	REV__ENSG00000167359|ENST00000380211|OR51I1;REV__OR51I1|p.A252G|1|0.12|ENSG00000167359|chr11:5440760-5440760|G/C|missense_variant	30.503639358989545	0.3235605894931338	2				NaN	NaN	0	NaN	9604	3980	13579
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13597	36.116	NaN	7089.1	30	0	1069.3	0.214	+			27682	MPVAQQPVY	9	67	516.7621941586282	1031.5098353840563	2	516.7630004882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MPVAQQPVY_	ENSG00000164120|ENST00000296522|HPGD;ENST00000511499.5_1_4:175413109-175416797:-|nuORF;ENST00000512410.1_1_4:175416602-175443578:-|nuORF;nc|ENSG00000164120|P15428-2|HPGD;nc|ENSG00000164120|P15428-3|HPGD;nc|ENSG00000164120|P15428-5|HPGD	45.9519527083369	0.35044536499095585	2				NaN	NaN	0	NaN	9612	3983	13596
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13598	36.12	NaN	5498.7	30	0	672.21	0.106				-1	 	0	61	553.7663070490388	1105.5180611648775	2	553.7671508789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9613	3983	13596
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13599	36.122	NaN	4053.8	30	0	609.1	0.106	+			49721	VYNENLVHM	9	69	559.7678112986448	1117.5210696640895	2	559.7688598632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYNENLVHM_	ENSG00000116752|ENST00000369541|BCAS2;ENST00000425064.1_1_1:100858662-100858893:-|nuORF	139.97047562133406	0.010493916756945389	2				NaN	NaN	0	NaN	9614	3983	13596
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13600	36.123	NaN	3382.4	30	0	506.87	0.106			+	25904	LSGHAIEAEL	10	64	520.2739248858284	1038.5332968384566	2	520.2745361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSGHAIEAEL_	REV__ENSG00000196976|ENST00000357360|LAGE3	39.252832667884924	0.5560298534376815	2				NaN	NaN	0	NaN	9615	3983	13596
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13601	36.125	NaN	3082.8	30	0	468.45	0.106	+			50395	YAAGAKLVL	9	59	453.2758717300024	904.5371905268048	2	453.27618408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YAAGAKLVL_	ENSG00000109016|ENST00000395511|DHRS7B	76.84663266511073	0.11118375776443899	2				NaN	NaN	0	NaN	9616	3983	13596
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13602	36.127	NaN	1030.7	30	0	108.33	0.033	+			22829	KVGFSPAGL	9	45	438.2523531960734	NaN	0	438.2520446777344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KVGFSPAGL_	ENST00000569862.5_1_16:67865068-67866179:-|nuORF	29.14955571784316	0.3303970763161698	2				NaN	NaN	0	NaN	9617	3983	13596
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13603	36.127	NaN	1983.5	30	0	312	0.14			+	27822	MSQPQMTPV	9	60	509.73652655833865	1017.4585001834773	2	509.28643798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MSQPQMTPV_	REV__ENST00000578711.1_1_17:7126890-7127154:+|nuORF	51.19269402634007	0.2889735674168909	2				NaN	NaN	0	NaN	9618	3983	13596
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13614	36.154	NaN	3870.9	30	0	718.4	0.214	+			44529	TSVLVVQFV	9	64	496.2942239983477	990.5738950634955	2	496.29486083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSVLVVQFV_	ENSG00000186815|ENST00000335509|TPCN1;ENST00000428632.7_1_12:113682520-113726187:+|nuORF;ENST00000552077.5_1_12:113664633-113726187:+|nuORF;nc|ENSG00000186815|Q9ULQ1-3|TPCN1;TPCN1|p.L349Sfs*26|1|0.08|ENSG00000186815|chr12:113277020-113277020|G/-|frameshift_variant	44.116797842482775	0.37197099687881774	2				NaN	NaN	0	NaN	9626	3986	13613
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13615	36.158	NaN	2467.2	30	0	188.12	0.106			+	20655	KGKNWLFM	8	72	512.2762353907749	1022.5379178483498	2	512.2771606445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KGKNWLFM_	REV__ENST00000568924.1_1_16:89367231-89379861:-|nuORF	35.200714571348534	0.6875396545722289	2				NaN	NaN	0	NaN	9627	3986	13613
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13616	36.16	NaN	2214.4	30	0	407.59	0.106			+	20845	KIKDVTEY	8	67	498.2733516970554	994.5321504609108	2	498.771728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KIKDVTEY_	REV__tr|U7SJV6|U7SJV6_FUSNUShikimatekinaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=aroKPE=3SV=1	37.15910966729921	0.6739408393984688	2				NaN	NaN	0	NaN	9628	3986	13613
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13617	36.162	NaN	4425.1	30	0	513.36	0.106	+			1603	AGLPAEVYIQD	11	58	392.535760391572	1174.585451774916	3	392.53662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AGLPAEVYIQD_	ENSG00000196924|ENST00000369850|FLNA;FLNA|p.G2237Efs*109|1|0.28|ENSG00000196924|chrX:154352240-154352240|C/-|frameshift_variant;FLNA|p.Q1716Sfs*23|2|0.38|ENSG00000196924|chrX:154354896-154354896|G/-|frameshift_variant;FLNA|p.R2520Vfs*16|1|0.7|ENSG00000196924|chrX:154349560-154349560|G/-|frameshift_variant;nc|ENSG00000196924|P21333-2|FLNA	41.080066990542036	0.5431644350485484	2				NaN	NaN	0	NaN	9629	3986	13613
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13618	36.164	NaN	2116.5	30	0	334.48	0.106	+			42396	TAIVHIQLI	9	61	504.3156729666607	1006.6167930001214	2	504.31610107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TAIVHIQLI_	ENSG00000104154|ENST00000261867|SLC30A4	35.61828744233558	0.47037581924408073	2				NaN	NaN	0	NaN	9630	3986	13613
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13619	36.165	NaN	1218.1	30	0	83.265	0.036			+	-1	AVMISIEEM	9	61	527.7449028658531	1053.475252798506	2	527.7455444335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Oxidation (M)	_AVM(Oxidation (M))ISIEEM(Oxidation (M))_	REV__nc|ENSG00000152061|Q5R372-9|RABGAP1L	45.9519527083369	0.35044536499095585	2				NaN	NaN	0	NaN	9631	3986	13613
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13620	36.166	NaN	1331.7	30	0	116.98	0.139			+	-1	MEDVAPKM	8	52	468.7136708467409	NaN	0	468.7145690917969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_M(Oxidation (M))EDVAPKM_	REV__nc|ENSG00000172428|Q8WXC6-1|COPS9	30.503639358989545	1.7418937515398478	2				NaN	NaN	0	NaN	9632	3986	13613
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13631	36.193	NaN	2978.4	30	0	299.16	0.214				-1	LIMHLFVL	8	67	501.2966487040901	1000.5787444749802	2	501.2969970703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LIM(Oxidation (M))HLFVL_	ENST00000468476.1_1_1:40026750-40026849:-|nuORF	43.626045697637714	0.6338121648150432	2				NaN	NaN	0	NaN	9640	3989	13630
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13632	36.196	NaN	3890.9	30	0	520.17	0.106	+			36717	SGTLTLKVL	9	65	466.29404351835797	NaN	0	466.2718200683594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SGTLTLKVL_	ENST00000367142.4_1_1:205684786-205684864:-|nuORF	30.317721548370564	0.32449924987115025	2				NaN	NaN	0	NaN	9641	3989	13630
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13633	36.198	NaN	5370.3	30	0	467.95	0.106				-1	 	0	65	485.7526622607388	969.4907715882777	2	485.7530212402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9642	3989	13630
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13634	36.2	NaN	1615.7	30	0	151.37	0.106				-1	DCMDTECSYMC	11	65	666.681640625	NaN	0	666.681640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Oxidation (M)	_DCM(Oxidation (M))DTECSYM(Oxidation (M))C_	FBN3|p.G1826C|1|0.26|ENSG00000142449|chr19:8096507-8096507|C/A|missense_variant	5.921104790170933	0.456735970842152	2				NaN	NaN	0	NaN	9643	3989	13630
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13635	36.202	NaN	1945.3	30	0	389.53	0.106			+	6729	CALCLLAP	8	40	402.2123057538734	NaN	0	402.2120361328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_CALCLLAP_	REV__ENST00000481739.1_1_9:137328530-137328701:+|nuORF	24.504012794735996	1.7418937515398478	2				NaN	NaN	0	NaN	9644	3989	13630
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13636	36.204	NaN	1239.1	30	0	233.68	0.035			+	8980	EFNCSVER	8	56	492.21621534831	NaN	0	492.2162780761719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EFNCSVER_	REV__ENSG00000177943|ENST00000317446|MAMDC4;REV__nc|ENSG00000177943|Q6UXC1-3|MAMDC4;REV__nc|ENSG00000177943|Q6UXC1|MAMDC4	31.529811441608018	1.7418937515398478	2				NaN	NaN	0	NaN	9645	3989	13630
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13637	36.204	NaN	1091.6	30	0	134.07	0.14	+			27243	MEPGNNPIF	9	52	509.73712158203125	NaN	0	509.73712158203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MEPGNNPIF_	BCL9|p.P1111Lfs*3|1|0.39|ENSG00000116128|chr1:147624005-147624005|G/-|frameshift_variant;BCL9|p.P971Hfs*11|2|0.26|ENSG00000116128|chr1:147622275-147622275|C/-|frameshift_variant;BCL9|p.Q1139Rfs*138|1|0.37|ENSG00000116128|chr1:147624089-147624089|C/-|frameshift_variant;BCL9|p.Q1162Rfs*115|2|0.28|ENSG00000116128|chr1:147624156-147624156|G/-|frameshift_variant;BCL9|p.V910Cfs*42|2|0.23|ENSG00000116128|chr1:147620874-147620875|-/C|frameshift_variant;ENSG00000116128|ENST00000234739|BCL9	26.69291269510374	0.34280015626154364	2				NaN	NaN	0	NaN	9646	3989	13630
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13649	36.232	NaN	4855.8	30	0	694.93	0.215				-1	SASLVFIGR	9	68	496.28132274617894	990.5480925591579	2	496.2818603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SASLVFIGR_	HERV1_I-int_dup2|chr3:34679996-34686397:+|1.0948245018220069|0.0565463038051543|4.28|448.0|239|1|anti-sense	63.30626980617807	0.18605348971131092	2				NaN	NaN	0	NaN	9655	3992	13648
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13650	36.235	NaN	9321.3	30	0	5167.3	0.106			+	36930	SIKVVDDYTIL	11	61	422.5709155660641	1264.6909172983924	3	422.5712585449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SIKVVDDYTIL_	REV__ENSG00000139625|ENST00000547488|MAP3K12;REV__ENST00000547020.1_1_12:53878838-53879309:-|nuORF;REV__MAP3K12|p.S536Hfs*45|1|0.23|ENSG00000139625|chr12:53483099-53483099|G/-|frameshift_variant;REV__MAP3K12|p.S536Lfs*35|1|0.36|ENSG00000139625|chr12:53483098-53483099|-/G|frameshift_variant;REV__nc|ENSG00000139625|Q12852|MAP3K12	21.0322348234405	0.7691802065814517	2				NaN	NaN	0	NaN	9656	3992	13648
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13651	36.237	NaN	3071.2	30	0	595.49	0.106			+	34124	RSSQGLASF	9	62	476.74773277577583	NaN	0	476.747802734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RSSQGLASF_	REV__ENSG00000135835|ENST00000367588|KIAA1614;REV__nc|ENSG00000135835|Q5VZ46-2|KIAA1614	44.377184641726394	0.24544280798894275	2				NaN	NaN	0	NaN	9657	3992	13648
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13652	36.239	NaN	2674.6	30	0	333.16	0.106			+	18430	ISCSDTPTRT	10	66	540.7528588959416	1079.491164858683	2	540.7537231445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ISCSDTPTRT_	REV__CTNND2|p.D443Tfs*113|1|0.35|ENSG00000169862|chr5:11364741-11364741|C/-|frameshift_variant	36.446750945000026	0.5818864909973037	2				NaN	NaN	0	NaN	9658	3992	13648
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13653	36.241	NaN	2202.2	30	0	291.97	0.106	+			43145	TESPAKFAL	9	63	482.2607421875	NaN	0	482.2607421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TESPAKFAL_	ENSG00000153179|ENST00000542104|RASSF3	58.78195531508484	0.1545138866451181	2				NaN	NaN	0	NaN	9659	3992	13648
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13654	36.243	NaN	9688.3	30	0	2963.5	0.038	+			51009	YIYDGELVSK	10	74	593.8029107193823	1185.5912685055646	2	593.8027954101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YIYDGELVSK_	ENSG00000117620|ENST00000533028|SLC35A3;nc|ENSG00000283761|Q9Y2D2-2|SLC35A3	117.5257442709337	0.03082425562130952	2				NaN	NaN	0	NaN	9660	3992	13648
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13665	36.268	NaN	4053.3	30	0	570.81	0.214	+			4010	ATCLPLSVR	9	67	480.27166522296636	958.5287775127327	2	480.2703552246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATCLPLSVR_	ASPM|p.I1717Nfs*24|1|0.43|ENSG00000066279|chr1:197104101-197104102|-/T|frameshift_variant;ASPM|p.I3229Nfs*2|1|0.48|ENSG00000066279|chr1:197090339-197090340|-/T|frameshift_variant;ASPM|p.K671Nfs*3|1|0.21|ENSG00000066279|chr1:197139780-197139780|T/-|frameshift_variant;ASPM|p.L1872Ffs*24|1|0.43|ENSG00000066279|chr1:197103635-197103636|-/A|frameshift_variant;ASPM|p.L397*|1|0.27|ENSG00000066279|chr1:197143062-197143062|A/-|frameshift_variant;ASPM|p.M2261*|1|0.44|ENSG00000066279|chr1:197102470-197102470|T/-|frameshift_variant;ASPM|p.N1062Rfs*28|1|0.1|ENSG00000066279|chr1:197124311-197124315|TAAGT/-|frameshift_variant;ASPM|p.N1680Kfs*11|1|0.33|ENSG00000066279|chr1:197104211-197104212|-/T|frameshift_variant;ASPM|p.Q2620Nfs*22|1|0.15|ENSG00000066279|chr1:197101393-197101394|-/TT|frameshift_variant;ASPM|p.Q2620Tfs*17|1|0.19|ENSG00000066279|chr1:197101393-197101394|-/T|frameshift_variant;ASPM|p.S605Lfs*16|1|0.24|ENSG00000066279|chr1:197142439-197142439|A/-|frameshift_variant;ENSG00000066279|ENST00000367409|ASPM;nc|ENSG00000066279|Q8IZT6-2|ASPM	58.22992032128504	0.22837015374068087	2				NaN	NaN	0	NaN	9668	3995	13664
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13666	36.271	NaN	1939.1	30	0	170.94	0.106			+	26053	LSLNMEKF	8	58	491.2567416933311	980.4989304534622	2	491.25640869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSLNMEKF_	REV__KSR2|p.E633K|1|0.35|ENSG00000171435|chr12:117525174-117525174|C/T|missense_variant	40.77816245573522	0.6514838689002179	2				NaN	NaN	0	NaN	9669	3995	13664
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13667	36.273	NaN	1532.9	30	0	135.32	0.106			+	21193	KLCYEKVRE	9	66	584.3150658387414	1166.6155787442826	2	584.3161010742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KLCYEKVRE_	REV__ENSG00000133985|ENST00000256367|TTC9	53.08895987439943	0.27122541748218487	2				NaN	NaN	0	NaN	9670	3995	13664
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13668	36.275	NaN	1182.6	30	0	133.52	0.106			+	6530	AYEAAACYKAP	11	46	579.2677065803686	1156.520860227537	2	579.268798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AYEAAACYKAP_	REV__ENST00000305963.2_1_X:135044472-135044568:-|nuORF	25.57405402267927	0.7215402271931856	2				NaN	NaN	0	NaN	9671	3995	13664
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13669	36.277	NaN	2621.9	30	0	158	0.106	+			47180	VLVAQHDVY	9	65	522.2784969741548	1042.5424410151095	2	522.2794799804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VLVAQHDVY_	ENSG00000140374|ENST00000557943|ETFA;ENST00000559075.5_1_15:76523658-76603729:-|nuORF;nc|ENSG00000140374|P13804-2|ETFA	44.116797842482775	0.37197099687881774	2				NaN	NaN	0	NaN	9672	3995	13664
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13670	36.278	NaN	1782.3	30	0	166.97	0.033	+			17357	IALEAAKAL	9	55	450.28104969283174	898.5475464524635	2	450.28106689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IALEAAKAL_	ENSG00000122218|ENST00000241704|COPA;nc|ENSG00000122218|P53621-2|COPA	79.71258880314673	0.09879134589249085	2				NaN	NaN	0	NaN	9673	3995	13664
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13671	36.279	NaN	3190.9	30	0	209.52	0.14			+	7574	DIKLPLKVL	9	64	519.8491540406167	1037.6837551480332	2	519.8492431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DIKLPLKVL_	REV__ENSG00000104047|ENST00000403028|DTWD1	74.1650062923329	0.12277912660386392	2				NaN	NaN	0	NaN	9674	3995	13664
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13682	36.305	NaN	24297	30	0	5924.1	0.214				-1	 	0	67	493.81539708765126	985.6162412421025	2	493.8158264160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9682	3998	13681
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13683	36.309	NaN	4974	30	0	1739.4	0.106	+			31853	QPTVTIKVY	9	70	524.8050265988786	1047.5955002645571	2	524.80615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QPTVTIKVY_	ENSG00000044574|ENST00000324460|HSPA5;HSPA5|p.N522Ifs*12|1|0.36|ENSG00000044574|chr9:125236992-125236992|T/-|frameshift_variant	79.45101966838831	0.09992237243120712	2				NaN	NaN	0	NaN	9683	3998	13681
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13684	36.311	NaN	6636.4	30	0	1987.6	0.106	+			39117	SSTMWTTLK	9	66	527.7648808565707	1053.5152087799413	2	527.7660522460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSTMWTTLK_	ENST00000587750.5_1_17:76198611-76202102:+|nuORF;ENST00000589664.5_1_17:76200913-76202102:+|nuORF	101.25262130126117	0.03792372629710479	2				NaN	NaN	0	NaN	9684	3998	13681
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13685	36.313	NaN	4345.5	30	0	467.66	0.106	+			27980	MVPGLALCLL	10	71	515.294613664498	1028.574674395796	2	515.294677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MVPGLALCLL_	ENSG00000178602|ENST00000319460|OTOS	54.76467175910256	0.41345489472286195	2				NaN	NaN	0	NaN	9685	3998	13681
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13686	36.314	NaN	4545.2	30	0	680.73	0.106				-1	 	0	62	483.26819371248024	964.5218344917605	2	483.2682189941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9686	3998	13681
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13687	36.316	NaN	3513.7	30	0	361.35	0.035	+			45869	VAMNIIMSK	9	62	503.77496586436155	NaN	0	503.7745056152344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VAMNIIMSK_	ENSG00000083642|ENST00000315596|PDS5B;nc|ENSG00000083642|Q9NTI5-2|PDS5B;PDS5B|p.K1268Rfs*8|1|0.07|ENSG00000083642|chr13:32770296-32770296|A/-|frameshift_variant;PDS5B|p.K1287Rfs*22|1|0.26|ENSG00000083642|chr13:32770351-32770351|A/-|frameshift_variant;PDS5B|p.N1390Cfs*12|1|0.44|ENSG00000083642|chr13:32770750-32770751|AA/-|frameshift_variant;PDS5B|p.S1198Vfs*10|1|0.28|ENSG00000083642|chr13:32764556-32764556|A/-|frameshift_variant	80.45461616416974	0.0698259577396595	2				NaN	NaN	0	NaN	9687	3998	13681
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13688	36.317	NaN	2978.7	30	0	518.9	0.138	+			10704	FAADAVKL	8	57	417.7392501765253	833.4639474198506	2	417.7402648925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FAADAVKL_	ENSG00000177156|ENST00000319006|TALDO1;ENST00000530666.1_1_11:764238-764842:+|nuORF;nc|ENSG00000177156|P37837-2|TALDO1	93.19546047674547	0.2677966331495483	2				NaN	NaN	0	NaN	9688	3998	13681
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13695	36.334	NaN	27727	30	0	3896.7	0.214	+			27099	MANGAVIHL	9	74	463.24916924982665	924.4837855664533	2	463.2496032714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MANGAVIHL_	ENSG00000099995|ENST00000215793|SF3A1;nc|ENSG00000099995|Q15459-2|SF3A1	163.84426431716093	0.003817671866125946	2				NaN	NaN	0	NaN	9692	4001	13694
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13696	36.338	NaN	10003	30	0	3799.9	0.106	+			31058	QEYAQVIKM	9	76	555.2861259977217	1108.5576990622433	2	555.287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QEYAQVIKM_	ENSG00000173674|ENST00000379607|EIF1AX;ENSG00000198692|ENST00000361365|EIF1AY;ENST00000465253.1_1_Y:22737757-22750047:+|nuORF	98.62937762414208	0.04060045538121712	2				NaN	NaN	0	NaN	9693	4001	13694
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13697	36.34	NaN	7849.6	30	0	1406.2	0.106	+			42239	TAAPGRFSF	9	71	477.24517392297594	952.4757949127519	2	477.24542236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TAAPGRFSF_	DCTPP1|p.E15D|1|0.42|ENSG00000179958|chr16:30429936-30429936|C/A|missense_variant;DCTPP1|p.Q82Kfs*25|1|0.35|ENSG00000179958|chr16:30424502-30424502|G/-|frameshift_variant;ENSG00000179958|ENST00000319285|DCTPP1;ENST00000565758.1_1_16:30441199-30441310:-|nuORF	47.95952297671804	0.32689736945648856	2				NaN	NaN	0	NaN	9694	4001	13694
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13698	36.341	NaN	2591.2	30	0	301.92	0.106	+			46293	VEINKIIST	9	63	508.80294570558385	1015.5913384779677	2	508.80303955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VEINKIIST_	ENSG00000124164|ENST00000475243|VAPB;ENST00000463370.5_1_20:57007450-57019288:+|nuORF;ENST00000476395.1_1_20:57015848-57019288:+|nuORF	46.45678178249821	0.34452392205506005	2				NaN	NaN	0	NaN	9695	4001	13694
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13699	36.343	NaN	1468.1	30	0	160.05	0.106	+			4800	ATNPQLAAVLR	11	53	577.337851978097	1152.6611510229939	2	577.3386840820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATNPQLAAVLR_	ENSG00000167741|ENST00000381550|GGT6;nc|ENSG00000167741|Q6P531-2|GGT6;nc|ENSG00000167741|Q6P531|GGT6	68.62578634547417	0.24719609611953774	2				NaN	NaN	0	NaN	9696	4001	13694
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13700	36.345	NaN	2144.7	30	0	307.28	0.106			+	22136	KSPPFLAQN	9	62	501.27385694062247	1000.533160948045	2	501.2744445800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KSPPFLAQN_	REV__ENSG00000006757|ENST00000381042|PNPLA4;REV__nc|ENSG00000006757|P41247-2|PNPLA4	39.252832667884924	0.4290233611298554	2				NaN	NaN	0	NaN	9697	4001	13694
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13701	36.347	NaN	1311.2	30	0	101.47	0.037				-1	MATCIWLRS	9	57	569.2820251485308	1136.5494973638615	2	569.2830200195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_MATC(Carbamidomethyl (C))IWLRS_	ENSG00000112294|ENST00000357578|ALDH5A1;nc|ENSG00000112294|P51649-2|ALDH5A1	47.657333605630114	0.33044192980041115	2				NaN	NaN	0	NaN	9698	4001	13694
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13708	36.362	NaN	7985.9	30	0	977.85	0.214			+	34733	RWIALVSM	8	76	488.2775730181614	974.5405931031228	2	488.7781677246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RWIALVSM_	REV__ENSG00000183317|ENST00000373048|EPHA10;REV__ENST00000446149.6_1_1:38181546-38201012:-|nuORF;REV__EPHA10|p.R869Gfs*10|1|0.12|ENSG00000183317|chr1:37719566-37719566|G/-|frameshift_variant;REV__nc|ENSG00000183317|Q5JZY3-3|EPHA10	88.64286706044652	0.2815785716369046	2				NaN	NaN	0	NaN	9702	4004	13707
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13709	36.366	NaN	2319.8	30	0	497.26	0.106	+			43857	TLYEGGYFK	9	60	539.2660540263857	1076.5175551195714	2	539.2672119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TLYEGGYFK_	ENSG00000107341|ENST00000263228|UBE2R2	39.252832667884924	0.4290233611298554	2				NaN	NaN	0	NaN	9703	4004	13707
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13710	36.368	NaN	5077.2	30	0	3509.6	0.106			+	50104	WGRWWFWLERR	11	58	559.9549056946378	1676.842887684113	3	559.9559326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_WGRWWFWLERR_	REV__ENST00000246635.7_1_17:39661629-39661743:-|nuORF	0.37141330420238305	0.902963125519592	2				NaN	NaN	0	NaN	9704	4004	13707
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13711	36.37	NaN	1988.9	30	0	258.47	0.106	+			1498	AFTKLGEL	8	53	439.75232241560803	877.4900918980161	2	439.7523498535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AFTKLGEL_	ENSG00000258315|ENST00000439424|C17orf49;ENST00000549857.1_1_17:6918176-6918548:+|nuORF;nc|ENSG00000258315|Q8IXM2-2|BAP18;nc|ENSG00000258315|Q8IXM2-3|BAP18	68.78682469695295	0.41700713582915416	2				NaN	NaN	0	NaN	9705	4004	13707
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13712	36.372	NaN	2944.9	30	0	246.67	0.106	+			7352	DCTLHISPL	9	70	499.75203211015304	997.4895112871061	2	499.7521057128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DCTLHISPL_	ENST00000407595.2_1_2:56602975-56611629:+|nuORF	53.351449002276354	0.2690372970092375	2				NaN	NaN	0	NaN	9706	4004	13707
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13713	36.373	NaN	3292.6	30	0	254.64	0.106	+			50046	WELGDAEDP	9	68	516.2206815666136	1030.4268102000271	2	515.7230834960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_WELGDAEDP_	ENSG00000113108|ENST00000357560|APBB3;ENST00000506165.1_1_5:139943324-139943944:-|nuORF;nc|ENSG00000113108|O95704-2|APBB3;nc|ENSG00000113108|O95704-3|APBB3;nc|ENSG00000113108|O95704-4|APBB3;nc|ENSG00000113108|O95704-5|APBB3;nc|ENSG00000113108|O95704-6|APBB3	53.351449002276354	0.2690372970092375	2				NaN	NaN	0	NaN	9707	4004	13707
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13714	36.375	NaN	2088.4	30	0	273.11	0.038				-1	ADALMPQLVQL	11	53	405.5548520673883	NaN	0	405.5561828613281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_ADALM(Oxidation (M))PQLVQL_	ENSG00000173064|ENST00000682272|HECTD4;ENST00000311694.7_1_12:112687934-112711582:-|nuORF;ENST00000547352.1_1_12:112696298-112699215:-|nuORF;HECTD4|p.A3108Gfs*4|1|0.12|ENSG00000173064|chr12:112185242-112185243|CC/-|frameshift_variant;HECTD4|p.A3108Rfs*26|1|0.37|ENSG00000173064|chr12:112185242-112185242|C/-|frameshift_variant;HECTD4|p.A4187Pfs*44|1|0.07|ENSG00000173064|chr12:112163201-112163201|C/-|frameshift_variant;HECTD4|p.L1880Pfs*22|1|0.19|ENSG00000173064|chr12:112231674-112231675|-/TAGGA|frameshift_variant;nc|ENSG00000173064|Q9Y4D8-2|HECTD4;nc|ENSG00000173064|Q9Y4D8-3|HECTD4;nc|ENSG00000173064|Q9Y4D8-4|HECTD4;nc|ENSG00000173064|Q9Y4D8-5|HECTD4;nc|ENSG00000173064|Q9Y4D8|HECTD4	30.568863376406313	0.42918353898720446	2				NaN	NaN	0	NaN	9708	4004	13707
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13727	36.402	NaN	20995	30	0	6455	0.214				-1	 	0	68	484.7630133165951	967.5114736999902	2	484.7635192871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9718	4007	13726
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13728	36.405	NaN	11934	30	0	3355.6	0.106	+			18973	IVSDFTIGR	9	66	504.2790091565423	1006.5434653798847	2	504.279541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IVSDFTIGR_	ENSG00000110713|ENST00000324932|NUP98;nc|ENSG00000110713|P52948-2|NUP98;nc|ENSG00000110713|P52948-3|NUP98;nc|ENSG00000110713|P52948-4|NUP98;nc|ENSG00000110713|P52948-6|NUP98;nc|ENSG00000110713|P52948|NUP98;NUP98|p.N1328Tfs*89|2|0.22|ENSG00000110713|chr11:3699159-3699159|T/-|frameshift_variant	129.42129120953632	0.01549634589885217	2				NaN	NaN	0	NaN	9719	4007	13726
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13729	36.407	NaN	9297.7	30	0	1935.9	0.106	+			39982	STMLQAIER	9	76	524.7757780888263	1047.5370032444525	2	524.7767944335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STMLQAIER_	ENSG00000181789|ENST00000314797|COPG1	125.71293069911285	0.017741295328254008	2				NaN	NaN	0	NaN	9720	4007	13726
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13730	36.409	NaN	9127.6	30	0	1671.5	0.106			+	42932	TEILKQTL	8	72	473.28326592865864	944.5519789241173	2	473.28424072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TEILKQTL_	REV__ENSG00000090060|ENST00000216277|PAPOLA;REV__ENST00000554130.5_1_14:96968887-96993844:+|nuORF;REV__nc|ENSG00000090060|P51003-2|PAPOLA	65.46538089061403	0.44767499471257033	2				NaN	NaN	0	NaN	9721	4007	13726
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13731	36.411	NaN	4681.1	30	0	626.87	0.106	+			44439	TSMLYVVGK	9	71	499.27247170626987	996.5303904793398	2	499.27288818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TSMLYVVGK_	ENSG00000106789|ENST00000375077|CORO2A	90.36981228632155	0.0638227155548745	2				NaN	NaN	0	NaN	9722	4007	13726
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13732	36.413	NaN	8341	30	0	1379.5	0.034				-1	 	0	60	457.2419566881987	912.4693604431974	2	457.2420959472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9723	4007	13726
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13733	36.413	NaN	3310.6	30	0	265.16	0.141			+	47122	VLNLYVEDK	9	59	546.800364993111	1091.5861770530219	2	546.8016967773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VLNLYVEDK_	REV__ENSG00000082701|ENST00000264235|GSK3B;REV__nc|ENSG00000082701|P49841-2|GSK3B	53.351449002276354	0.2690372970092375	2				NaN	NaN	0	NaN	9724	4007	13726
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13745	36.44	NaN	17028	30	0	4313.4	0.214	+			43364	TGEAMLVIK	9	74	481.2728073727713	960.5310618123426	2	481.27294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TGEAMLVIK_	tr|U7T480|U7T480_FUSNUhistidinekinaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00375PE=4SV=1	131.03138772384656	0.014687601201650916	2				NaN	NaN	0	NaN	9733	4010	13744
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13746	36.444	NaN	10585	30	0	1124.5	0.106			+	34734	RWIALVSM	8	79	488.2775730181614	974.5405931031228	2	488.28070068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RWIALVSM_	REV__ENSG00000183317|ENST00000373048|EPHA10;REV__ENST00000446149.6_1_1:38181546-38201012:-|nuORF;REV__EPHA10|p.R869Gfs*10|1|0.12|ENSG00000183317|chr1:37719566-37719566|G/-|frameshift_variant;REV__nc|ENSG00000183317|Q5JZY3-3|EPHA10	101.21157088398209	0.2500103534009131	2				NaN	NaN	0	NaN	9734	4010	13744
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13747	36.446	NaN	10487	30	0	1670.7	0.106	+			10465	EVNSGFFYK	9	66	545.7633500707528	1089.5121472083056	2	545.764892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EVNSGFFYK_	CCT6A|p.I274*|1|0.21|ENSG00000146731|chr7:56058450-56058450|A/-|frameshift_variant;CCT6B|p.I274*|1|0.1|ENSG00000132141|chr17:34942549-34942549|T/-|frameshift_variant;ENSG00000132141|ENST00000314144|CCT6B;ENSG00000146731|ENST00000275603|CCT6A;ENST00000482776.1_1_7:56124009-56126486:+|nuORF;nc|ENSG00000132141|Q92526-2|CCT6B;nc|ENSG00000132141|Q92526-3|CCT6B;nc|ENSG00000146731|P40227-2|CCT6A	101.60071028292904	0.0375685401170269	2				NaN	NaN	0	NaN	9735	4010	13744
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13748	36.447	NaN	6293.6	30	0	877.54	0.106				-1	ISCRKIAES	9	68	532.2814707953451	1062.54838865749	2	532.2825317382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_ISC(Carbamidomethyl (C))RKIAES_	ENSG00000052795|ENST00000264433|FNIP2;FNIP2|p.M738Wfs*5|1|0.27|ENSG00000052795|chr4:158868842-158868842|A/-|frameshift_variant;nc|ENSG00000052795|Q9P278-2|FNIP2	37.81151784470057	0.4459294069877048	2				NaN	NaN	0	NaN	9736	4010	13744
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13749	36.449	NaN	2754.7	30	0	321.02	0.106			+	51078	YLPAVLPF	8	56	460.2682150485234	918.5218771638469	2	460.2672119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YLPAVLPF_	REV__ENST00000394963.8_1_12:50478976-50479033:+|nuORF	33.49298260027079	0.7007254697536482	2				NaN	NaN	0	NaN	9737	4010	13744
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13750	36.451	NaN	1895.8	30	0	150.59	0.036	+			3595	ASVNFSEFSK	10	62	558.2724722838236	NaN	0	558.2725219726562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASVNFSEFSK_	ENSG00000189403|ENST00000341423|HMGB1;ENST00000559968.1_1_14:68082236-68082464:+|nuORF;HMGB1|p.K44T|1|0.44|ENSG00000189403|chr13:30463550-30463550|T/G|missense_variant	47.227680397652996	0.32312948777114064	2				NaN	NaN	0	NaN	9738	4010	13744
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13751	36.452	NaN	1438.6	30	0	268.83	0.14	+			26742	LVLYGERY	8	54	506.77686574997983	NaN	0	506.75848388671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LVLYGERY_	DDX60|p.F1672Lfs*25|1|0.08|ENSG00000137628|chr4:168220678-168220678|A/-|frameshift_variant;DDX60|p.T1194Pfs*8|1|0.22|ENSG00000137628|chr4:168252634-168252634|T/-|frameshift_variant;ENSG00000137628|ENST00000393743|DDX60	23.036711822280957	1.7418937515398478	2				NaN	NaN	0	NaN	9739	4010	13744
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13763	36.478	NaN	8065.1	30	0	828.01	0.214	+			35176	SAIGRAMEL	9	83	474.2520021280622	946.4894513229244	2	474.25213623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAIGRAMEL_	ARHGEF12|p.G1290Afs*71|1|0.09|ENSG00000196914|chr11:120480061-120480062|-/CTGCAAGAATTAAATTA|frameshift_variant;ENSG00000196914|ENST00000397843|ARHGEF12;ENST00000529970.5_1_11:120278459-120348246:+|nuORF;nc|ENSG00000196914|Q9NZN5-2|ARHGEF12	66.96192283764107	0.15557981141143568	2				NaN	NaN	0	NaN	9748	4013	13762
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13764	36.482	NaN	3740.5	30	0	500.74	0.106	+			17330	IAIDGGKVL	9	60	443.2731952541396	884.5318375750792	2	443.2734069824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IAIDGGKVL_	ENSG00000132952|ENST00000255304|USPL1;USPL1|p.N138S|1|0.29|ENSG00000132952|chr13:30631019-30631019|A/G|missense_variant	82.24051045832904	0.08786059719216216	2				NaN	NaN	0	NaN	9749	4013	13762
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13765	36.484	NaN	3198.1	30	0	495.71	0.106	+			8465	EASGTTTQAY	10	68	514.7287930978117	NaN	0	514.7286376953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EASGTTTQAY_	ENSG00000185345|ENST00000366898|PRKN;nc|ENSG00000185345|O60260-2|PRKN;nc|ENSG00000185345|O60260-4|PRKN;nc|ENSG00000185345|O60260-6|PRKN;nc|ENSG00000185345|O60260-7|PRKN;nc|ENSG00000185345|O60260-8|PRKN	56.72105179125745	0.2610545891966633	2				NaN	NaN	0	NaN	9750	4013	13762
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13766	36.486	NaN	2258.4	30	0	195.43	0.106				-1	 	0	60	553.7663070490388	1105.5180611648775	2	553.7672119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9751	4013	13762
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13767	36.488	NaN	3082.4	30	0	883.4	0.106			+	18673	ISYLTGVLA	9	65	468.77340407514066	935.5322552170813	2	468.7732238769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ISYLTGVLA_	REV__tr|U7SKU9|U7SKU9_FUSNUNTEfamilyproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01940PE=4SV=1	51.33545320467046	0.2872990594074956	2				NaN	NaN	0	NaN	9752	4013	13762
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13768	36.489	NaN	2215.1	30	0	550.06	0.036	+			32721	RALYDLLIAA	10	63	559.8313427680439	1117.6481326028877	2	559.8324584960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RALYDLLIAA_	TTC28|p.P1403A|1|0.32|ENSG00000100154|chr22:28014259-28014259|G/C|missense_variant	26.69291269510374	0.6618461711292317	2				NaN	NaN	0	NaN	9753	4013	13762
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13769	36.49	NaN	2964.7	30	0	292.68	0.14			+	926	AEIKGKFCP	9	64	496.76423301028245	991.5139130873649	2	496.764892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AEIKGKFCP_	REV__nc|ENSG00000188707|Q96FA7|ZBED10P	54.776311868738084	0.25715957988447635	2				NaN	NaN	0	NaN	9754	4013	13762
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13780	36.517	NaN	6022.5	30	0	805.43	0.214				-1	 	0	57	438.2175875794539	874.4206222257078	2	438.21771240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9762	4016	13779
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13781	36.52	NaN	3545.1	30	0	470.24	0.106	+			48456	VTLHDMILK	9	66	535.3061559875417	1068.5977590418834	2	535.3087158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTLHDMILK_	ENSG00000131467|ENST00000590720|PSME3;nc|ENSG00000131467|P61289-2|PSME3;nc|ENSG00000131467|P61289-3|PSME3	47.95952297671804	0.32689736945648856	2				NaN	NaN	0	NaN	9763	4016	13779
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13782	36.522	NaN	1897.9	30	0	231.79	0.106			+	4868	ATPVSNTVM	9	54	460.2300609757649	NaN	0	460.2300109863281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATPVSNTVM_	REV__ENSG00000103449|ENST00000251020|SALL1;REV__nc|ENSG00000103449|Q9NSC2-2|SALL1;REV__SALL1|p.V965Sfs*11|1|0.18|ENSG00000103449|chr16:51139330-51139331|-/G|frameshift_variant	39.252832667884924	0.27938773122138094	2				NaN	NaN	0	NaN	9764	4016	13779
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13783	36.524	NaN	1803.5	30	0	532.2	0.106			+	45910	VAQGSGLL	8	42	372.7171465581136	743.4197401830272	2	372.7173767089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VAQGSGLL_	REV__ENST00000475941.1_1_22:20096259-20097628:+|nuORF	28.2542754592877	0.7411748056684583	2				NaN	NaN	0	NaN	9765	4016	13779
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13784	36.526	NaN	3359.8	30	0	817.16	0.106				-1	VTAALHMVIV	10	44	357.20682848304693	1068.598656049341	3	357.2075500488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_VTAALHM(Oxidation (M))VIV_	nc|ENSG00000005483|Q8IZD2-3|KMT2E	22.579656572578934	0.6954366826851017	2				NaN	NaN	0	NaN	9766	4016	13779
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13785	36.528	NaN	1265.6	30	0	103.28	0.032			+	46546	VFGVARIG	8	45	409.7470125822711	817.4794722313422	2	409.74774169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VFGVARIG_	REV__ARSJ|p.N431Kfs*53|1|0.24|ENSG00000180801|chr4:113902781-113902782|-/T|frameshift_variant;REV__ARSJ|p.N431Mfs*86|1|0.09|ENSG00000180801|chr4:113902782-113902782|T/-|frameshift_variant;REV__ARSJ|p.P469Lfs*48|1|0.31|ENSG00000180801|chr4:113902668-113902668|G/-|frameshift_variant;REV__ENSG00000180801|ENST00000315366|ARSJ	54.76467175910256	0.5536104764165384	2				NaN	NaN	0	NaN	9767	4016	13779
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13795	36.551	NaN	10405	30	0	2225.5	0.214	+			31869	QPVSQPLTY	9	68	516.7710778526441	1031.5276027720881	2	516.7715454101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QPVSQPLTY_	ENSG00000177106|ENST00000318562|EPS8L2;ENST00000526909.5_1_11:710402-726978:+|nuORF;ENST00000527832.5_1_11:724661-726978:+|nuORF;ENST00000531393.5_1_11:721935-726978:+|nuORF;ENST00000534679.1_1_11:726170-726978:+|nuORF;EPS8L2|p.V669Gfs*33|1|0.13|ENSG00000177106|chr11:726690-726690|T/-|frameshift_variant;nc|ENSG00000177106|Q9H6S3-2|EPS8L2;nc|ENSG00000177106|Q9H6S3-3|EPS8L2	60.11826168202944	0.21262886028301267	2				NaN	NaN	0	NaN	9774	4019	13794
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13796	36.555	NaN	2870.7	30	0	678.77	0.106			+	43557	THTALPPIY	9	57	506.77686574997983	NaN	0	506.7764892578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_THTALPPIY_	REV__ENSG00000117335|ENST00000367042|CD46;REV__ENST00000469535.5_1_1:207925470-207933074:+|nuORF;REV__nc|ENSG00000117335|P15529-10|CD46;REV__nc|ENSG00000117335|P15529-12|CD46;REV__nc|ENSG00000117335|P15529-13|CD46;REV__nc|ENSG00000117335|P15529-14|CD46;REV__nc|ENSG00000117335|P15529-15|CD46;REV__nc|ENSG00000117335|P15529-2|CD46;REV__nc|ENSG00000117335|P15529-3|CD46;REV__nc|ENSG00000117335|P15529-4|CD46;REV__nc|ENSG00000117335|P15529-5|CD46;REV__nc|ENSG00000117335|P15529-6|CD46;REV__nc|ENSG00000117335|P15529-7|CD46;REV__nc|ENSG00000117335|P15529-8|CD46;REV__nc|ENSG00000117335|P15529-9|CD46;REV__nc|ENSG00000117335|P15529|CD46	33.51558372728122	0.30835390848773375	2				NaN	NaN	0	NaN	9775	4019	13794
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13797	36.557	NaN	2090.4	30	0	222.9	0.106	+			11045	FEMAVAKV	8	56	447.74051721572005	893.4664814982401	2	447.7413635253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FEMAVAKV_	ENSG00000087191|ENST00000310144|PSMC5;ENST00000579147.5_1_17:61906826-61909326:+|nuORF;ENST00000584657.1_1_17:61909038-61909326:+|nuORF;nc|ENSG00000087191|P62195-2|PSMC5	51.33545320467046	0.5859736979383976	2				NaN	NaN	0	NaN	9776	4019	13794
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13798	36.558	NaN	2292.7	30	0	195.19	0.034	+			34148	RSWASLVL	8	59	466.2714267028771	930.5283004725542	2	466.2732238769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RSWASLVL_	ENSG00000089597|ENST00000356638|GANAB;GANAB|p.L23*|4|0.22|ENSG00000089597|chr11:62639702-62639702|A/-|frameshift_variant;nc|ENSG00000089597|Q14697-2|GANAB;nc|ENSG00000089597|Q14697-3|GANAB	54.776311868738084	0.5534952410049249	2				NaN	NaN	0	NaN	9777	4019	13794
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13809	36.583	NaN	9888.1	30	0	1511.1	0.214	+			653	AEAEKVLAL	9	68	472.27619486197784	942.5378367907557	2	472.27642822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEAEKVLAL_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	78.26377905018397	0.10505600812668463	2				NaN	NaN	0	NaN	9785	4022	13808
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13810	36.587	NaN	9613.2	30	0	1729.2	0.106	+			15390	GTYDILVTK	9	79	505.2814402911429	1008.5483276490859	2	505.281982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTYDILVTK_	ENSG00000114302|ENST00000265563|PRKAR2A;nc|ENSG00000114302|P13861-2|PRKAR2A	138.06239232086	0.011389075116295402	2				NaN	NaN	0	NaN	9786	4022	13808
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13811	36.589	NaN	1644.4	30	0	175.76	0.035			+	3146	ASIAASAAFPL	11	62	509.78167599946	1017.54879906572	2	509.7820129394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASIAASAAFPL_	REV__ENST00000261483.4_1_5:109025110-109025431:+|nuORF	31.529811441608018	0.6590691889962369	2				NaN	NaN	0	NaN	9787	4022	13808
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13825	36.619	NaN	36951	30	0	11483	0.214	+			28998	NSNDVFVLK	9	81	518.2766758652103	1034.5387987972206	2	518.2772216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NSNDVFVLK_	ENSG00000006747|ENST00000297029|SCIN;ENSG00000127831|ENST00000248444|VIL1;nc|ENSG00000006747|Q9Y6U3-3|SCIN	169.6522961985778	0.0028262690464207238	2				NaN	NaN	0	NaN	9798	4025	13824
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13826	36.622	NaN	3858.5	30	0	722.4	0.106			+	43648	TISAFLGTLG	10	58	490.2762080863328	978.5378632394657	2	490.2764587402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TISAFLGTLG_	REV__tr|U7SLP3|U7SLP3_FUSNUV-typeATPsynthasesubunitIOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02120PE=3SV=1	51.33545320467046	0.4446945571623749	2				NaN	NaN	0	NaN	9799	4025	13824
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13827	36.624	NaN	5759.9	30	0	687.69	0.106	+			35514	SAVDVHINM	9	64	493.2414452665138	984.4683375998276	2	493.2420654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAVDVHINM_	ENSG00000204463|ENST00000676615|BAG6;nc|ENSG00000204463|P46379-2|BAG6;nc|ENSG00000204463|P46379-4|BAG6;nc|ENSG00000204463|P46379-5|BAG6;nc|ENSG00000204463|P46379|BAG6	75.04331003522576	0.118981335847003	2				NaN	NaN	0	NaN	9800	4025	13824
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13828	36.626	NaN	2237.9	30	0	484.19	0.106	+			51586	YYNKVSTVF	9	64	560.7870971065179	1119.5596412798357	2	560.7872314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YYNKVSTVF_	ENSG00000107581|ENST00000369144|EIF3A;nc|ENSG00000107581|Q14152-2|EIF3A	44.116797842482775	0.37197099687881774	2				NaN	NaN	0	NaN	9801	4025	13824
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13829	36.628	NaN	850.74	30	0	67.813	0.106			+	17531	IDPHYVGG	8	39	429.2126566902539	856.4107604473078	2	429.2121276855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IDPHYVGG_	REV__ENST00000477450.1_1_1:165619084-165623023:+|nuORF	28.2542754592877	0.7411748056684583	2				NaN	NaN	0	NaN	9802	4025	13824
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13830	36.63	NaN	3488.2	30	0	599.02	0.036			+	16653	HICTEGCFL	9	65	540.237042960601	1078.459532988002	2	540.2376708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_HIC(Carbamidomethyl (C))TEGCFL_	REV__ENST00000393094.6_1_11:107975177-107975369:+|nuORF	47.91560031466742	0.327412564698279	2				NaN	NaN	0	NaN	9803	4025	13824
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13831	36.63	NaN	2276.5	30	0	194.53	0.14			+	29329	NYSHDELY	8	60	520.7205911975418	1039.4266294618835	2	520.7215576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NYSHDELY_	REV__ENSG00000170703|ENST00000393382|TTLL6;REV__ENST00000376681.7_1_17:46840236-46881289:-|nuORF;REV__nc|ENSG00000170703|Q8N841-2|TTLL6;REV__nc|ENSG00000170703|Q8N841-3|TTLL6	51.33545320467046	0.5859736979383976	2				NaN	NaN	0	NaN	9804	4025	13824
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13842	36.657	NaN	3407.6	30	0	380.76	0.214	+			45350	TVSSVNEAF	9	59	477.23262551126436	952.4506980893287	2	477.2320251464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVSSVNEAF_	ENSG00000136045|ENST00000412830|PWP1	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	9812	4028	13841
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13843	36.661	NaN	10436	30	0	2404.3	0.106	+			43377	TGFNGKLVY	9	72	499.76870026266414	997.5228475921283	2	499.7688903808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TGFNGKLVY_	ENSG00000083857|ENST00000441802|FAT1;FAT1|p.G2934Vfs*3|2|0.37|ENSG00000083857|chr4:186617787-186617787|T/-|frameshift_variant;FAT1|p.K1225Nfs*9|1|0.03|ENSG00000083857|chr4:186636885-186636885|G/-|frameshift_variant;FAT1|p.N3847Yfs*7|1|0.03|ENSG00000083857|chr4:186601370-186601371|-/TTATA|frameshift_variant;FAT1|p.P3228Lfs*42|1|0.27|ENSG00000083857|chr4:186611556-186611556|G/-|frameshift_variant;FAT1|p.P4313Lfs*36|1|0.34|ENSG00000083857|chr4:186596602-186596602|G/-|frameshift_variant;FAT1|p.Q2933Hfs*14|1|0.33|ENSG00000083857|chr4:186617787-186617788|-/G|frameshift_variant;FAT1|p.T1364Yfs*8|1|0.23|ENSG00000083857|chr4:186636118-186636119|-/A|frameshift_variant;FAT1|p.V1878Cfs*8|2|0.22|ENSG00000083857|chr4:186620955-186620956|-/G|frameshift_variant	67.49366992349736	0.1516260258713357	2				NaN	NaN	0	NaN	9813	4028	13841
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13844	36.663	NaN	5185.9	30	0	635.52	0.106				-1	MCVFHWKL	8	70	540.2625369842683	1078.5105210353365	2	540.7638549804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))CVFHWKL_	ENST00000261868.9_1_15:44849833-44852464:+|nuORF	42.47446043378293	0.6409579893742323	2				NaN	NaN	0	NaN	9814	4028	13841
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13845	36.664	NaN	5633.3	30	0	568.37	0.106	+			44628	TTFLLPGQK	9	71	502.79201316318944	1003.5694733931789	2	502.7922058105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TTFLLPGQK_	ENSG00000074964|ENST00000361221|ARHGEF10L;ENST00000469726.5_1_1:17942561-18023872:+|nuORF;nc|ENSG00000074964|Q9HCE6-2|ARHGEF10L;nc|ENSG00000074964|Q9HCE6-3|ARHGEF10L;nc|ENSG00000074964|Q9HCE6-4|ARHGEF10L	71.87747018426188	0.13267044672804276	2				NaN	NaN	0	NaN	9815	4028	13841
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13846	36.666	NaN	1094.7	30	0	71.213	0.106	+			16394	HEQEEIFKL	9	58	586.8005852040011	1171.586617474802	2	586.80078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HEQEEIFKL_	ENSG00000146872|ENST00000346027|TLK2;ENSG00000198586|ENST00000431350|TLK1;ENST00000414066.1_1_10:38107898-38108846:-|nuORF;ENST00000530992.1_1_17:32364642-32365872:-|nuORF;nc|ENSG00000146872|Q86UE8-3|TLK2;nc|ENSG00000146872|Q86UE8|TLK2;nc|ENSG00000198586|Q9UKI8-2|TLK1;nc|ENSG00000198586|Q9UKI8-3|TLK1;nc|ENSG00000198586|Q9UKI8-4|TLK1;nc|ENSG00000198586|Q9UKI8-5|TLK1	47.95952297671804	0.32689736945648856	2				NaN	NaN	0	NaN	9816	4028	13841
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13847	36.668	NaN	2727.4	30	0	420.83	0.106	+			34987	SAAQPGVAF	9	55	424.21859016657754	846.4226273999551	2	424.21905517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SAAQPGVAF_	ENSG00000108061|ENST00000369452|SHOC2;nc|ENSG00000108061|Q9UQ13-2|SHOC2	40.77816245573522	0.41113185337114944	2				NaN	NaN	0	NaN	9817	4028	13841
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13848	36.67	NaN	1696.7	30	0	90.862	0.034	+			40629	SVAMLGAGAGV	11	58	466.7463759677901	931.4781990023802	2	466.7468566894531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVAMLGAGAGV_	ENSG00000204922|ENST00000377953|UQCC3	56.72105179125745	0.35272424613657194	2				NaN	NaN	0	NaN	9818	4028	13841
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13860	36.695	NaN	9142.4	30	0	2249.7	0.214			+	34661	RVRHWTQT	8	73	542.2945938725488	1082.5746348118976	2	542.295654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVRHWTQT_	REV__ENSG00000174123|ENST00000308973|TLR10;REV__TLR10|p.A753Hfs*28|1|0.31|ENSG00000174123|chr4:38773335-38773335|T/-|frameshift_variant	53.351449002276354	0.5676011784961348	2				NaN	NaN	0	NaN	9827	4031	13859
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13861	36.699	NaN	1595.6	30	0	148.07	0.106	+			43146	TESPENVAL	9	51	480.2371394959743	958.4597260587486	2	480.2375793457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TESPENVAL_	ENSG00000117597|ENST00000491415|UTP25	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	9828	4031	13859
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13862	36.701	NaN	920.84	30	0	52.109	0.106				-1	GLCAEQNQ	8	52	460.2000732421875	NaN	0	460.2000732421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_GLC(Carbamidomethyl (C))AEQNQ_	ENST00000407472.5_1_22:19838375-19838693:-|nuORF	37.15910966729921	1.7418937515398478	2				NaN	NaN	0	NaN	9829	4031	13859
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13863	36.703	NaN	2050.3	30	0	146.72	0.106	+			28857	NPVQPINDM	9	64	514.2476924047978	NaN	0	514.2474975585938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NPVQPINDM_	ENSG00000137076|ENST00000314888|TLN1;nc|ENSG00000137076|Q9Y490-2|TLN1;TLN1|p.P1628Rfs*20|1|0.44|ENSG00000137076|chr9:35707144-35707144|G/-|frameshift_variant	42.86426827375447	0.2558691296974908	2				NaN	NaN	0	NaN	9830	4031	13859
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13864	36.705	NaN	1440.1	30	0	282.77	0.106			+	-1	FSFCNKYT	8	61	533.7382659437276	NaN	0	533.7391357421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_FSFC(Carbamidomethyl (C))NKYT_	REV__ENST00000487739.1_1_3:56595040-56595103:+|nuORF	37.15910966729921	1.7418937515398478	2				NaN	NaN	0	NaN	9831	4031	13859
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13865	36.706	NaN	1540.5	30	0	371.02	0.036			+	2625	AQIILKACEN	10	63	551.8017908564267	1101.5890287796533	2	551.8031005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AQIILKACEN_	REV__ENSG00000129187|ENST00000438320|DCTD;REV__nc|ENSG00000129187|P32321-2|DCTD	23.52269567125451	0.6877354443478558	2				NaN	NaN	0	NaN	9832	4031	13859
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13866	36.707	NaN	1397.1	30	0	247.14	0.14	+			30038	PPSALRPKPS	10	60	525.3082999052161	NaN	0	525.3082275390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PPSALRPKPS_	LRFN2|p.P647L|1|0.29|ENSG00000156564|chr6:40392373-40392373|G/A|missense_variant	25.57405402267927	0.4162033004763879	2				NaN	NaN	0	NaN	9833	4031	13859
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13877	36.734	NaN	2306.5	30	0	252.37	0.214	+			26335	LSWPQLSY	8	69	497.2554962877836	NaN	0	497.2537841796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSWPQLSY_	ENSG00000102030|ENST00000464845|NAA10;ENSG00000156269|ENST00000286794|NAA11;ENST00000466877.5_1_X:153197755-153200402:-|nuORF;ENST00000478177.1_1_X:153199394-153200402:-|nuORF;ENST00000494813.5_1_X:153187159-153200402:-|nuORF;nc|ENSG00000102030|P41227-2|NAA10	58.78195531508484	1.7418937515398478	2				NaN	NaN	0	NaN	9841	4034	13876
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13878	36.738	NaN	3908.8	30	0	578.73	0.106	+			48538	VTNVTSLLK	9	69	487.7972006222932	973.5798483113864	2	487.7973327636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTNVTSLLK_	ENSG00000137076|ENST00000314888|TLN1;ENSG00000171914|ENST00000636159|TLN2;nc|ENSG00000137076|Q9Y490-2|TLN1	99.01295224348159	0.040209060045561164	2				NaN	NaN	0	NaN	9842	4034	13876
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13879	36.739	NaN	2856.7	30	0	394.8	0.106	+			42248	TAAPVEVSTTY	11	65	569.7851020242416	1137.5556511152831	2	569.7857055664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TAAPVEVSTTY_	ENSG00000205277|ENST00000536621|MUC12;ENSG00000205277|ENST00000536621|MUC12;nc|ENSG00000205277|Q9UKN1|MUC12;nc|ENSG00000205277|Q9UKN1|MUC12	58.22992032128504	0.3392555181951113	2				NaN	NaN	0	NaN	9843	4034	13876
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13880	36.741	NaN	1888.4	30	0	280.54	0.106			+	5218	ATTTPATDTPF	11	57	561.7686497128512	1121.5227464925024	2	561.76904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATTTPATDTPF_	REV__ENSG00000132510|ENST00000448097|KDM6B;REV__KDM6B|p.K1101Rfs*3|1|0.23|ENSG00000132510|chr17:7849583-7849583|C/-|frameshift_variant;REV__KDM6B|p.P842Hfs*52|1|0.38|ENSG00000132510|chr17:7848808-7848808|C/-|frameshift_variant;REV__nc|ENSG00000132510|O15054-1|KDM6B	31.529811441608018	0.6590691889962369	2				NaN	NaN	0	NaN	9844	4034	13876
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13881	36.743	NaN	1461.9	30	0	116.39	0.106			+	10983	FEELQDKN	8	60	511.7424496382551	1021.4703463433102	2	512.7406616210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FEELQDKN_	REV__ENSG00000196465|ENST00000695999|MYL6B;REV__ENST00000405661.8_1_12:56547702-56549525:+|nuORF;REV__ENST00000550152.5_1_12:56547702-56549709:+|nuORF	23.04248740728303	0.7814162927298575	2				NaN	NaN	0	NaN	9845	4034	13876
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13882	36.745	NaN	1190.6	30	0	144	0.036			+	10396	EVDYLKYY	8	52	546.765869140625	NaN	0	546.765869140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EVDYLKYY_	REV__SCYL2|p.D146Y|1|0.16|ENSG00000136021|chr12:100298131-100298131|G/T|missense_variant	31.954861631926434	1.7418937515398478	2				NaN	NaN	0	NaN	9846	4034	13876
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13883	36.745	NaN	276.4	30	0	62.384	0.138			+	47164	VLSLPHWL	8	17	322.1933288574219	NaN	0	322.1933288574219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VLSLPHWL_	REV__ENST00000391834.6_1_19:50372434-50372704:-|nuORF	8.822329726475273	1.7418937515398478	2				NaN	NaN	0	NaN	9847	4034	13876
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13894	36.772	NaN	15024	30	0	1451.4	0.214	+			51156	YPAQGVQQF	9	80	519.256144727208	1036.497736521216	2	519.256591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YPAQGVQQF_	EIF4G1|p.P1229Qfs*2|1|0.18|ENSG00000114867|chr3:184327606-184327606|C/-|frameshift_variant;EIF4G1|p.T436Hfs*40|1|0.21|ENSG00000114867|chr3:184321883-184321884|-/C|frameshift_variant;ENSG00000114867|ENST00000346169|EIF4G1;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1	152.6333611392302	0.006255334666816058	2				NaN	NaN	0	NaN	9855	4037	13893
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13895	36.776	NaN	3121	30	0	564.32	0.106				-1	 	0	60	484.7630133165951	967.5114736999902	2	484.76422119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9856	4037	13893
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13896	36.778	NaN	5268.5	30	0	598.41	0.106	+			37804	SMGAVQQF	8	53	434.20459850137604	866.3946440695521	2	434.2048645019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SMGAVQQF_	ENSG00000138190|ENST00000260762|EXOC6;nc|ENSG00000138190|Q8TAG9-2|EXOC6	111.64827973302667	0.24425243057279236	2				NaN	NaN	0	NaN	9857	4037	13893
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13897	36.78	NaN	2320.2	30	0	164	0.036	+			35322	SANDFQVFK	9	60	528.2616921734407	NaN	0	528.2620239257812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SANDFQVFK_	ENSG00000177853|ENST00000316045|ZNF518A;ZNF518A|p.I1254Nfs*11|1|0.18|ENSG00000177853|chr10:96160075-96160076|-/A|frameshift_variant;ZNF518A|p.L1107Ffs*8|1|0.31|ENSG00000177853|chr10:96159635-96159636|-/T|frameshift_variant;ZNF518A|p.N426Mfs*2|1|0.29|ENSG00000177853|chr10:96157595-96157595|A/-|frameshift_variant;ZNF518A|p.R303Kfs*10|1|0.3|ENSG00000177853|chr10:96157223-96157224|-/A|frameshift_variant	65.46538089061403	0.1260090208616529	2				NaN	NaN	0	NaN	9858	4037	13893
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13909	36.805	NaN	18768	30	0	3435.3	0.214	+			14487	GTCLFVAVK	9	75	497.77293147531356	NaN	0	497.77325439453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GTC(Carbamidomethyl (C))LFVAVK_	ENSG00000198752|ENST00000361246|CDC42BPB	134.81075121484326	0.00014775810808422246	2				NaN	NaN	0	NaN	9867	4040	13908
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13910	36.809	NaN	5561	30	0	1546.7	0.106	+			32968	REDQVILRL	9	70	571.3374381807331	1140.660323428266	2	571.338623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_REDQVILRL_	ENSG00000103067|ENST00000473183|ESRP2;ENST00000566774.1_1_16:68264768-68266536:-|nuORF;nc|ENSG00000103067|Q9H6T0|ESRP2	80.45461616416974	0.09558281504443908	2				NaN	NaN	0	NaN	9868	4040	13908
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13911	36.811	NaN	2796.1	30	0	578.91	0.106				-1	 	0	60	457.2888858783422	912.5632188234845	2	457.2890319824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9869	4040	13908
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13912	36.812	NaN	2067.7	30	0	148.08	0.106			+	-1	LSGRKRNM	8	59	489.2704848909186	976.5264168486373	2	489.268798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_LSGRKRNM(Oxidation (M))_	REV__ENST00000256458.4_1_3:10242142-10242175:+|nuORF	50.0245360154114	0.5941082100236891	2				NaN	NaN	0	NaN	9870	4040	13908
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13913	36.814	NaN	1856	30	0	154.73	0.106				-1	 	0	52	438.2175875794539	874.4206222257078	2	438.2177429199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9871	4040	13908
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13914	36.816	NaN	1540.5	30	0	367.83	0.106	+			44221	TRPGSLLP	8	44	420.74983227798316	839.4851116227663	2	420.7502746582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TRPGSLLP_	E2F8|p.T831Ifs*21|1|0.05|ENSG00000129173|chr11:19224770-19224771|-/TTTAA|frameshift_variant;ENSG00000129173|ENST00000250024|E2F8;XCR1|p.Y14Tfs*33|1|0.3|ENSG00000173578|chr3:46021908-46021908|A/-|frameshift_variant	21.9598887501803	0.7897753010812679	2				NaN	NaN	0	NaN	9872	4040	13908
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13915	36.818	NaN	1486.9	30	0	330.5	0.038				-1	IIAAFIGTKCQ	11	57	611.3370126648354	1220.6594723964706	2	611.3378295898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_IIAAFIGTKC(Carbamidomethyl (C))Q_	ENSG00000077458|ENST00000358780|FAM76B;nc|ENSG00000077458|Q5HYJ3-2|FAM76B;nc|ENSG00000077458|Q5HYJ3-3|FAM76B	39.252832667884924	0.5681665794958463	2				NaN	NaN	0	NaN	9873	4040	13908
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13929	36.847	NaN	3233	30	0	318.68	0.214			+	24512	LGKGKKEE	8	61	444.761802440196	887.509051947192	2	444.7612609863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LGKGKKEE_	REV__ENSG00000166152|ENST00000299191|C16orf78	57.81127852772723	0.5234495074909924	2				NaN	NaN	0	NaN	9884	4043	13928
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13930	36.851	NaN	2557.4	30	0	399.87	0.106	+			28128	NAISVTTSY	9	57	478.2398628108157	954.4651726884314	2	478.2399597167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NAISVTTSY_	ENSG00000198730|ENST00000361367|CTR9	90.36981228632155	0.0638227155548745	2				NaN	NaN	0	NaN	9885	4043	13928
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13931	36.853	NaN	1937.6	30	0	164.35	0.106			+	-1	MLQMLGIAGA	10	62	510.7638879421793	1019.5132229511586	2	510.76495361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))LQMLGIAGA_	REV__tr|U7SPE4|U7SPE4_FUSNUTransglycosylaseSLTdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01838PE=3SV=1	37.15910966729921	0.575322462179216	2				NaN	NaN	0	NaN	9886	4043	13928
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13932	36.855	NaN	2187.9	30	0	124.76	0.106	+			19101	IYKDSSTFL	9	57	537.2789463294228	1072.5433397256454	2	537.2802124023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IYKDSSTFL_	ENSG00000145388|ENST00000388822|METTL14	56.72105179125745	0.24094814563026265	2				NaN	NaN	0	NaN	9887	4043	13928
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13933	36.856	NaN	2297.9	30	0	242.15	0.106	+			23423	LACGVAKVL	9	55	437.26436392557486	872.5141749179497	2	437.2648620605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LACGVAKVL_	ENSG00000265972|ENST00000582401|TXNIP	85.35947970620816	0.07794846947388434	2				NaN	NaN	0	NaN	9888	4043	13928
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13934	36.858	NaN	1268.3	30	0	103.76	0.106			+	46990	VKRGSWDEM	9	54	554.2682751181309	NaN	0	554.2679443359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VKRGSWDEM_	REV__ENSG00000136859|ENST00000373425|ANGPTL2;REV__nc|ENSG00000136859|Q9UKU9-2|ANGPTL2	24.519189625965996	0.35377483217337163	2				NaN	NaN	0	NaN	9889	4043	13928
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13935	36.86	NaN	1830.6	30	0	144.38	0.035	+			46504	VEVEIQRL	8	61	493.2863308289856	984.5581087247713	2	493.2867736816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VEVEIQRL_	CD163|p.Y843Tfs*38|1|0.36|ENSG00000177575|chr12:7485348-7485348|A/-|frameshift_variant;ENSG00000177575|ENST00000432237|CD163;ENST00000537044.1_1_12:7633616-7656286:-|nuORF;nc|ENSG00000177575|Q86VB7-2|CD163;nc|ENSG00000177575|Q86VB7-4|CD163;nc|ENSG00000177575|Q86VB7|CD163	44.116797842482775	0.6307669463330267	2				NaN	NaN	0	NaN	9890	4043	13928
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13946	36.885	NaN	12567	30	0	3009.9	0.214			+	51050	YLEIADEV	8	62	476.2373656913277	950.4601784494554	2	476.2374267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YLEIADEV_	REV__CAPN7|p.K253Nfs*21|1|0.35|ENSG00000131375|chr3:15227870-15227870|A/-|frameshift_variant;REV__ENSG00000131375|ENST00000253693|CAPN7;REV__ENST00000457023.1_1_3:15247773-15262489:+|nuORF	50.0245360154114	0.5941082100236891	2				NaN	NaN	0	NaN	9898	4046	13945
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13947	36.889	NaN	8494.3	30	0	1045	0.106	+			36441	SEVELMKV	8	66	467.7487143450198	933.4828757568396	2	467.7491760253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEVELMKV_	ENSG00000115758|ENST00000234111|ODC1	148.04295825190792	0.24280381333290152	2				NaN	NaN	0	NaN	9899	4046	13945
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13948	36.891	NaN	2530.9	30	0	872.02	0.106			+	-1	MVMVHNKL	8	59	502.25793537189645	1002.5013178105929	2	502.2581481933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Oxidation (M)	_M(Oxidation (M))VM(Oxidation (M))VHNKL_	REV__ENSG00000154493|ENST00000488181|C10orf90	35.200714571348534	0.6875396545722289	2				NaN	NaN	0	NaN	9900	4046	13945
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13949	36.893	NaN	1299.1	30	0	108.56	0.106	+			10152	ESSQHVTQL	9	57	514.7532228961321	1027.4918928590641	2	514.75341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ESSQHVTQL_	ENSG00000170961|ENST00000303924|HAS2;HAS2|p.G240Efs*6|1|0.41|ENSG00000170961|chr8:121617115-121617115|C/-|frameshift_variant	60.97194046774394	0.20551255781574032	2				NaN	NaN	0	NaN	9901	4046	13945
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13950	36.894	NaN	1038.3	30	0	166.32	0.106	+			7511	DGLWTTIT	8	41	453.7336120605469	NaN	0	453.7336120605469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DGLWTTIT_	nc|ENSG00000211892|P01861|IGHG4;nc|ENSG00000211893|P01859|IGHG2;nc|ENSG00000211896|P01857|IGHG1;nc|ENSG00000211897|P01860|IGHG3	31.954861631926434	1.7418937515398478	2				NaN	NaN	0	NaN	9902	4046	13945
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13951	36.896	NaN	1705.6	30	0	208.55	0.106	+			50682	YEEKISVL	8	61	490.7666941315051	979.5188353298103	2	490.76617431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YEEKISVL_	ENSG00000144674|ENST00000361924|GOLGA4;GOLGA4|p.N1805Kfs*18|1|0.11|ENSG00000144674|chr3:37327293-37327294|-/A|frameshift_variant;GOLGA4|p.N1805Tfs*6|1|0.38|ENSG00000144674|chr3:37327294-37327294|A/-|frameshift_variant;nc|ENSG00000144674|Q13439-3|GOLGA4;nc|ENSG00000144674|Q13439-4|GOLGA4;nc|ENSG00000144674|Q13439-5|GOLGA4	54.776311868738084	0.5534952410049249	2				NaN	NaN	0	NaN	9903	4046	13945
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13952	36.898	NaN	1236.4	30	0	150.01	0.033	+			19516	KAVLTPAVT	9	51	450.28143310546875	NaN	0	450.28143310546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KAVLTPAVT_	ENSG00000188162|ENST00000399397|OTOG;nc|ENSG00000188162|Q6ZRI0-2|OTOG;nc|ENSG00000188162|Q6ZRI0|OTOG	53.351449002276354	0.18359631779194618	2				NaN	NaN	0	NaN	9904	4046	13945
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13963	36.923	NaN	5581.1	30	0	918.85	0.214	+			45600	TYPDVNNSI	9	62	511.7424496382551	1021.4703463433102	2	511.7425842285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TYPDVNNSI_	ENSG00000122958|ENST00000263559|VPS26A;nc|ENSG00000122958|O75436-2|VPS26A	101.25262130126117	0.03792372629710479	2				NaN	NaN	0	NaN	9912	4049	13962
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13964	36.927	NaN	1997.9	30	0	327.04	0.106			+	26509	LTNSVTDVGA	10	59	488.74906373131824	975.4835745294365	2	488.7491760253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LTNSVTDVGA_	REV__CYP27B1|p.H441Tfs*33|2|0.49|ENSG00000111012|chr12:57763703-57763703|G/-|frameshift_variant;REV__ENSG00000111012|ENST00000228606|CYP27B1	40.77816245573522	0.5419747034533848	2				NaN	NaN	0	NaN	9913	4049	13962
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13965	36.929	NaN	5134.8	30	0	1812.8	0.106	+			4885	ATQDILKALSK	11	40	396.5709958717289	1186.6911582153866	3	396.57098388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATQDILKALSK_	ENSG00000085276|ENST00000651503|MECOM;MECOM|p.G611Efs*33|1|0.39|ENSG00000085276|chr3:169115476-169115476|C/-|frameshift_variant;MECOM|p.G614Efs*30|5|0.4|ENSG00000085276|chr3:169115469-169115469|T/-|frameshift_variant;MECOM|p.P513Qfs*15|2|0.39|ENSG00000085276|chr3:169115772-169115772|A/-|frameshift_variant;MECOM|p.S389Rfs*46|1|0.33|ENSG00000085276|chr3:169116140-169116143|CTGA/-|frameshift_variant;MECOM|p.V498Sfs*27|1|0.34|ENSG00000085276|chr3:169115816-169115817|-/T|frameshift_variant;nc|ENSG00000085276|Q03112-1|MECOM;nc|ENSG00000085276|Q03112-4|MECOM;nc|ENSG00000085276|Q03112-5|MECOM;nc|ENSG00000085276|Q03112-6|MECOM;nc|ENSG00000085276|Q03112-8|MECOM;nc|ENSG00000085276|Q03112|MECOM	52.167168403610894	0.39337392184041037	2				NaN	NaN	0	NaN	9914	4049	13962
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13966	36.931	NaN	4262	30	0	1571	0.106	+			49909	VYTTTVHW	8	68	503.7531828819265	1005.491812830653	2	504.2541198730469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VYTTTVHW_	ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1670Tfs*23|1|0.29|ENSG00000174231|chr17:1659487-1659487|C/-|frameshift_variant	62.97842346883844	0.4722955155785405	2				NaN	NaN	0	NaN	9915	4049	13962
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13967	36.932	NaN	2449.5	30	0	333.33	0.106	+			47470	VQALKYENF	9	73	556.2926319406542	1110.5707109481084	2	556.2935791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VQALKYENF_	ENSG00000078142|ENST00000262039|PIK3C3;PIK3C3|p.F623Lfs*43|2|0.38|ENSG00000078142|chr18:42037716-42037716|T/-|frameshift_variant	95.81516180277367	0.04847050768394289	2				NaN	NaN	0	NaN	9916	4049	13962
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13968	36.934	NaN	1925.8	30	0	228.18	0.034				-1	 	0	51	460.77563197122777	919.5367110092556	2	460.77606201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9917	4049	13962
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13969	36.935	NaN	1874.8	30	0	340.39	0.139			+	9174	EGPQLTMAL	9	51	480.2464682757825	958.478383618365	2	480.24658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EGPQLTMAL_	REV__AluSz6_dup5069|chr2:47377230-47377536:-|1.0621030440935346|0.2745788286115291|1.95|483.0|14|3|sense	56.72105179125745	0.24094814563026265	2				NaN	NaN	0	NaN	9918	4049	13962
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13980	36.962	NaN	5649.3	30	0	1725.6	0.214	+			5194	ATTPELLLK	9	57	493.2996041523357	984.5846553714714	2	493.3000793457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATTPELLLK_	DYNC1H1|p.F2635Lfs*67|1|0.16|ENSG00000197102|chr14:102017141-102017141|T/-|frameshift_variant;DYNC1H1|p.K3112Hfs*3|1|0.31|ENSG00000197102|chr14:102027998-102027999|-/TCACAAG|frameshift_variant;DYNC1H1|p.W4201Gfs*43|1|0.42|ENSG00000197102|chr14:102043958-102043958|G/-|frameshift_variant;ENSG00000197102|ENST00000360184|DYNC1H1	46.45678178249821	0.34452392205506005	2				NaN	NaN	0	NaN	9926	4052	13979
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13981	36.965	NaN	1555.5	30	0	450.28	0.106	+			10690	EYVEKFYRI	9	54	623.8272745817275	1245.6399962302548	2	623.8255004882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EYVEKFYRI_	ENSG00000113522|ENST00000378823|RAD50;nc|ENSG00000113522|Q92878-2|RAD50;nc|ENSG00000113522|Q92878-3|RAD50;RAD50|p.R1279C|1|0.9|ENSG00000113522|chr5:132642260-132642260|C/T|missense_variant	49.536043120802724	0.308405419312776	2				NaN	NaN	0	NaN	9927	4052	13979
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13982	36.967	NaN	1623.9	30	0	206.6	0.106			+	-1	QAGGVRCS	8	46	417.6975580942958	833.3805632553916	2	417.6980285644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_QAGGVRC(Carbamidomethyl (C))S_	REV__ENST00000452801.1_1_2:238499822-238500588:+|nuORF	23.04248740728303	0.7814162927298575	2				NaN	NaN	0	NaN	9928	4052	13979
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13983	36.969	NaN	1064.6	30	0	73.783	0.106	+			48388	VTIACLGAL	9	53	430.7489593199745	NaN	0	430.74835205078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTIACLGAL_	ENSG00000164082|ENST00000395052|GRM2;ENST00000296479.9_1_3:51747995-51752125:+|nuORF	76.84663266511073	0.08218905260741291	2				NaN	NaN	0	NaN	9929	4052	13979
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13984	36.971	NaN	1378.9	30	0	214.17	0.037			+	-1	SQGLCQPQGPA	11	39	381.51350409295446	1141.5186828790634	3	381.8479309082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_SQGLC(Carbamidomethyl (C))QPQGPA_	REV__ENST00000371276.8_2_1:55253469-55266576:-|nuORF	21.0322348234405	0.7691802065814517	2				NaN	NaN	0	NaN	9930	4052	13979
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13993	36.992	NaN	14991	30	0	4409.6	0.214	+			41682	SVSDIIVVAK	10	71	515.8104076883712	1029.6062624435424	2	515.811279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSDIIVVAK_	ENSG00000006042|ENST00000579849|TMEM98;ENST00000583120.1_1_17:31258522-31263466:+|nuORF	136.5150327860613	0.011683253857074924	2				NaN	NaN	0	NaN	9936	4055	13992
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13994	36.996	NaN	3255.1	30	0	948.05	0.106	+			46699	VGLGLGVG	8	41	336.207682466859	670.400812000518	2	336.2078552246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VGLGLGVG_	ENST00000409419.5_1_19:40854631-40872336:+|nuORF;ENST00000409587.5_1_19:40854631-40871796:+|nuORF;ENST00000594085.5_1_19:40854631-40871460:+|nuORF	54.89457262308372	0.5523244765420926	2				NaN	NaN	0	NaN	9937	4055	13992
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13995	36.998	NaN	2294	30	0	222.05	0.106			+	21779	KQTEGKKEQ	9	63	538.2914364197062	1074.5683199062123	2	538.2930908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KQTEGKKEQ_	REV__PIK3CA|p.D725G|1|0.53|ENSG00000121879|chr3:179221144-179221144|A/G|missense_variant	49.536043120802724	0.308405419312776	2				NaN	NaN	0	NaN	9938	4055	13992
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13996	37	NaN	2346.2	30	0	590.82	0.036	+			46495	VETVYTHVL	9	58	530.7860340539985	1059.557515174797	2	530.7883911132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VETVYTHVL_	ENSG00000163902|ENST00000296255|RPN1	68.78682469695295	0.14603441672067394	2				NaN	NaN	0	NaN	9939	4055	13992
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14007	37.025	NaN	3979.2	30	0	450.93	0.141			+	48189	VTAIIGNVV	9	65	443.2734981112883	884.5324432893766	2	443.2738037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTAIIGNVV_	REV__DAGLB|p.E562Gfs*56|1|0.32|ENSG00000164535|chr7:6410265-6410266|-/C|frameshift_variant;REV__DAGLB|p.L359*|1|0.33|ENSG00000164535|chr7:6424816-6424816|A/-|frameshift_variant;REV__ENSG00000164535|ENST00000297056|DAGLB;REV__nc|ENSG00000164535|Q8NCG7-3|DAGLB;REV__nc|ENSG00000164535|Q8NCG7-4|DAGLB	47.657333605630114	0.33044192980041115	2				NaN	NaN	0	NaN	9947	4058	14006
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14020	37.054	NaN	5323.1	30	0	889.36	0.214	+			36945	SILNNPIVK	9	67	499.30523214572617	996.5959113582524	2	499.30548095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SILNNPIVK_	ENSG00000162664|ENST00000340281|ZNF326;ENST00000394583.7_1_1:90470639-90493257:+|nuORF;nc|ENSG00000162664|Q5BKZ1-3|ZNF326;ZNF326|p.A460V|1|0.18|ENSG00000162664|chr1:90022323-90022323|C/T|missense_variant	99.01295224348159	0.040209060045561164	2				NaN	NaN	0	NaN	9957	4061	14019
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14021	37.058	NaN	3061.7	30	0	300.72	0.106			+	33911	RRSMQVSL	8	71	488.77236516770836	NaN	0	488.77239990234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RRSMQVSL_	REV__ENSG00000010282|ENST00000441594|HHATL	30.503639358989545	1.7418937515398478	2				NaN	NaN	0	NaN	9958	4061	14019
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14022	37.06	NaN	1910.4	30	0	203.3	0.106	+			37293	SLATIQKIP	9	62	485.8001593223655	NaN	0	485.8003845214844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLATIQKIP_	ENSG00000157954|ENST00000288828|WIPI2;ENST00000466014.5_1_7:5232953-5270575:+|nuORF;ENST00000471851.1_1_7:5266712-5270575:+|nuORF;nc|ENSG00000157954|Q9Y4P8-2|WIPI2;nc|ENSG00000157954|Q9Y4P8-3|WIPI2;nc|ENSG00000157954|Q9Y4P8-4|WIPI2;nc|ENSG00000157954|Q9Y4P8-5|WIPI2;nc|ENSG00000157954|Q9Y4P8-6|WIPI2	26.69291269510374	0.34280015626154364	2				NaN	NaN	0	NaN	9959	4061	14019
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14023	37.061	NaN	2919.2	30	0	262.1	0.106	+			21665	KQALKYFNL	9	73	562.8262059732448	1123.6378590132895	2	562.8275146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KQALKYFNL_	ENSG00000071537|ENST00000336735|SEL1L	90.77665401227738	0.06267569666681755	2				NaN	NaN	0	NaN	9960	4061	14019
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14024	37.063	NaN	1498.8	30	0	127.13	0.106			+	10292	ETPCLAVRK	9	61	508.78057861328125	NaN	0	508.78057861328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ETPCLAVRK_	REV__ENST00000374403.3_1_X:69549299-69549356:+|nuORF	37.15910966729921	0.2899585034171616	2				NaN	NaN	0	NaN	9961	4061	14019
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14025	37.065	NaN	1091.8	30	0	104.87	0.037			+	17982	IHIHNPNLGL	10	35	376.55029296875	NaN	0	376.55029296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IHIHNPNLGL_	REV__ENSG00000140564|ENST00000268171|FURIN;REV__FURIN|p.C644Afs*13|1|0.32|ENSG00000140564|chr15:90881418-90881418|C/-|frameshift_variant	24.519189625965996	0.41966695327750003	2				NaN	NaN	0	NaN	9962	4061	14019
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14036	37.09	NaN	1304.4	30	0	98.751	0.214			+	28504	NHLGEIEVE	9	67	520.2581778075197	1038.5018026818393	2	520.7633056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NHLGEIEVE_	REV__UBE2U|p.Q44H|1|0.34|ENSG00000177414|chr1:64205704-64205704|G/T|missense_variant	42.396135135203025	0.392153681582562	2				NaN	NaN	0	NaN	9970	4064	14035
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14037	37.094	NaN	3030.7	30	0	419.6	0.106			+	18734	ITHEFQATY	9	57	555.2663135212993	1108.5180741093984	2	555.267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ITHEFQATY_	REV__ENSG00000111142|ENST00000323666|METAP2;REV__nc|ENSG00000111142|P50579-2|METAP2;REV__nc|ENSG00000111142|P50579-3|METAP2	47.657333605630114	0.33044192980041115	2				NaN	NaN	0	NaN	9971	4064	14035
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14038	37.096	NaN	1425.6	30	0	132.94	0.106	+			11965	FVLVTHPS	8	52	450.2522305051282	NaN	0	450.2522277832031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FVLVTHPS_	ENST00000461241.1_1_22:31518992-31523076:+|nuORF	54.76467175910256	1.7418937515398478	2				NaN	NaN	0	NaN	9972	4064	14035
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14039	37.098	NaN	2122.2	30	0	282.12	0.106	+			16514	HEVEKMFTL	9	65	567.2865811965052	1132.5586094598102	2	567.287841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HEVEKMFTL_	ENSG00000139719|ENST00000267199|VPS33A;ENST00000544349.5_1_12:122735394-122750988:-|nuORF;VPS33A|p.F371Lfs*4|1|0.18|ENSG00000139719|chr12:122239929-122239929|A/-|frameshift_variant;VPS33A|p.F82Lfs*6|1|0.44|ENSG00000139719|chr12:122263622-122263622|A/-|frameshift_variant;VPS33A|p.G459Afs*86|7|0.14|ENSG00000139719|chr12:122235850-122235850|C/-|frameshift_variant;VPS33A|p.G552Afs*2|1|0.26|ENSG00000139719|chr12:122232382-122232382|C/-|frameshift_variant;VPS33A|p.R460Qfs*17|2|0.28|ENSG00000139719|chr12:122235849-122235850|-/C|frameshift_variant	56.72105179125745	0.24094814563026265	2				NaN	NaN	0	NaN	9973	4064	14035
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14040	37.099	NaN	2203.1	30	0	275.64	0.035	+			26534	LTRCMFAY	8	67	502.7375647487572	NaN	0	502.7374572753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LTRCMFAY_	ENSG00000140521|ENST00000268124|POLG	26.79610172149135	1.7418937515398478	2				NaN	NaN	0	NaN	9974	4064	14035
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14052	37.125	NaN	8941.9	30	0	2387.6	0.214				-1	SISVLLVAC	9	60	481.27236208213145	960.5301712310629	2	481.2732238769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SISVLLVAC(Carbamidomethyl (C))_	ENSG00000105983|ENST00000353442|LMBR1;nc|ENSG00000105983|Q8WVP7-3|LMBR1	57.81127852772723	0.2318599694398087	2				NaN	NaN	0	NaN	9983	4067	14051
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14053	37.128	NaN	3568.6	30	0	392.54	0.106	+			667	AEAIRILAA	9	59	464.2841730551813	926.5537931771627	2	464.2848815917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEAIRILAA_	ENSG00000165283|ENST00000356493|STOML2;nc|ENSG00000165283|Q9UJZ1-2|STOML2	67.49366992349736	0.1516260258713357	2				NaN	NaN	0	NaN	9984	4067	14051
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14054	37.13	NaN	3248.2	30	0	655.23	0.106	+			30943	QELSLRPL	8	60	478.2819449063228	NaN	0	478.2818908691406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QELSLRPL_	ENSG00000146112|ENST00000274853|PPP1R18;nc|ENSG00000146112|Q6NYC8-2|PPP1R18	40.77816245573522	1.7418937515398478	2				NaN	NaN	0	NaN	9985	4067	14051
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14055	37.132	NaN	3034.6	30	0	218.23	0.106	+			51157	YPAQGVQQF	9	67	519.256144727208	1036.497736521216	2	519.2574462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YPAQGVQQF_	EIF4G1|p.P1229Qfs*2|1|0.18|ENSG00000114867|chr3:184327606-184327606|C/-|frameshift_variant;EIF4G1|p.T436Hfs*40|1|0.21|ENSG00000114867|chr3:184321883-184321884|-/C|frameshift_variant;ENSG00000114867|ENST00000346169|EIF4G1;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1	76.84663266511073	0.11118375776443899	2				NaN	NaN	0	NaN	9986	4067	14051
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14056	37.134	NaN	1674.2	30	0	306.96	0.106	+			17509	IDIKGPSL	8	48	421.7521941301972	841.4898353271944	2	421.7523193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IDIKGPSL_	AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK	98.62937762414208	0.25143494708580966	2				NaN	NaN	0	NaN	9987	4067	14051
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14057	37.136	NaN	2537.1	30	0	559.03	0.106	+			46859	VIIGSTHVL	9	55	469.7867766241811	937.5590003151622	2	469.7865905761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VIIGSTHVL_	ENSG00000116266|ENST00000370008|STXBP3	57.81127852772723	0.2318599694398087	2				NaN	NaN	0	NaN	9988	4067	14051
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14058	37.137	NaN	1246.6	30	0	134.4	0.033			+	46220	VEALGLVR	8	47	428.7660361285026	NaN	0	428.7660217285156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VEALGLVR_	REV__ENSG00000123342|ENST00000322569|MMP19;REV__ENST00000547487.5_1_12:56235002-56236716:-|nuORF;REV__nc|ENSG00000123342|Q99542-4|MMP19;REV__nc|ENSG00000123342|Q99542-5|MMP19	73.97473282117947	1.7418937515398478	2				NaN	NaN	0	NaN	9989	4067	14051
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14069	37.163	NaN	14498	30	0	4242.9	0.214	+			49054	VVINYSIVK	9	76	517.8156253253983	1033.6166977175965	2	517.8163452148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVINYSIVK_	ENSG00000196405|ENST00000392920|EVL;ENST00000554460.5_1_14:100540857-100568654:+|nuORF;ENST00000556921.1_1_14:100551177-100572452:+|nuORF;ENST00000557637.1_1_14:100531783-100564000:+|nuORF;EVL|p.P188Hfs*41|1|0.18|ENSG00000196405|chr14:100128589-100128590|-/CC|frameshift_variant;nc|ENSG00000196405|Q9UI08-3|EVL;nc|ENSG00000196405|Q9UI08-4|EVL;nc|ENSG00000196405|Q9UI08-5|EVL;nc|ENSG00000196405|Q9UI08|EVL	150.36159442982594	0.006784847064083231	2				NaN	NaN	0	NaN	9997	4070	14068
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14070	37.166	NaN	18054	30	0	4691.4	0.106				-1	 	0	73	457.2888858783422	912.5632188234845	2	457.2892761230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9998	4070	14068
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14071	37.168	NaN	4894.4	30	0	1758.6	0.106	+			31349	QIYGVFDEK	9	66	549.7764911127074	1097.5384292922147	2	549.77734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QIYGVFDEK_	ENSG00000150712|ENST00000382142|MTMR12;nc|ENSG00000150712|Q9C0I1-2|MTMR12;nc|ENSG00000150712|Q9C0I1-3|MTMR12	65.46538089061403	0.16805504838372562	2				NaN	NaN	0	NaN	9999	4070	14068
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14072	37.17	NaN	1498.4	30	0	131.95	0.106	+			10411	EVGEAIQEKI	10	62	558.3011474609375	NaN	0	558.3011474609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EVGEAIQEKI_	AKR1B10|p.Q198Hfs*53|1|0.07|ENSG00000198074|chr7:134537091-134537092|-/CT|frameshift_variant;AKR1B10|p.T244Nfs*29|1|0.39|ENSG00000198074|chr7:134537643-134537644|-/A|frameshift_variant;ENSG00000198074|ENST00000359579|AKR1B10;ENSG00000227471|ENST00000457545|AKR1B15;nc|ENSG00000227471|C9JRZ8|AKR1B15	32.03412808689991	0.3949916132702916	2				NaN	NaN	0	NaN	10000	4070	14068
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14073	37.172	NaN	2217.9	30	0	136.39	0.106				-1	ISKLCDLK	8	59	488.7776794433594	NaN	0	488.7776794433594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_ISKLC(Carbamidomethyl (C))DLK_	tr|U7SRN9|U7SRN9_FUSNUTetraacyldisaccharide4'-kinaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=lpxKPE=3SV=1	35.61828744233558	1.7418937515398478	2				NaN	NaN	0	NaN	10001	4070	14068
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14074	37.174	NaN	1865.1	30	0	197.18	0.034	+			38573	SSFMQALGK	9	57	484.74671447391506	967.4788760146301	2	484.7470397949219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSFMQALGK_	ENST00000375897.7_1_10:27529373-27529592:-|nuORF	34.172542307311794	0.4838870758800184	2				NaN	NaN	0	NaN	10002	4070	14068
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14087	37.201	NaN	6059.4	30	0	752.11	0.214	+			17159	HTGPGLLSM	9	55	456.7334921103492	911.4524312874984	2	456.7335510253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HTGPGLLSM_	ENSG00000084072|ENST00000324379|PPIE;ENSG00000153201|ENST00000283195|RANBP2;ENST00000470213.5_1_1:40214588-40218763:+|nuORF;ENST00000482751.5_1_1:40208803-40219024:+|nuORF;nc|ENSG00000084072|Q9UNP9-2|PPIE;nc|ENSG00000084072|Q9UNP9-3|PPIE	49.44154591367651	0.3095138337212152	2				NaN	NaN	0	NaN	10012	4073	14086
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14088	37.205	NaN	8303.1	30	0	1363	0.106	+			42207	TAAGLMHTF	9	73	474.733531264543	947.452509595886	2	474.7336120605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAAGLMHTF_	ENSG00000086475|ENST00000327347|SEPHS1;ENSG00000179918|ENST00000478753|SEPHS2;ENST00000446112.1_1_X:72989760-72990255:+|nuORF;nc|ENSG00000086475|P49903-3|SEPHS1;nc|ENSG00000086475|P49903-4|SEPHS1	191.6257511998002	0.00012895968667509943	2				NaN	NaN	0	NaN	10013	4073	14086
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14089	37.206	NaN	5471.2	30	0	1472.3	0.106	+			6032	AVMGAYVLLK	10	68	540.8089626820325	1079.603372430865	2	540.810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_AVM(Oxidation (M))GAYVLLK_	ENSG00000166562|ENST00000587834|SEC11C;ENST00000591406.1_1_18:56822908-56825914:+|nuORF	71.29570347882199	0.26673431503403816	2				NaN	NaN	0	NaN	10014	4073	14086
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14090	37.208	NaN	13620	30	0	1731.1	0.106				-1	 	0	71	439.75798210552824	877.5014112778565	2	439.75811767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10015	4073	14086
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14091	37.21	NaN	6767.8	30	0	1819.2	0.106	+			41122	SVISSPLLK	9	63	472.294462469654	942.574372006108	2	472.2945251464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVISSPLLK_	BRD2|p.G595Vfs*6|1|0.59|ENSG00000204256|chr6:32978327-32978327|G/-|frameshift_variant;ENSG00000204256|ENST00000374825|BRD2;nc|ENSG00000204256|P25440-2|BRD2;nc|ENSG00000204256|P25440-3|BRD2;nc|ENSG00000204256|P25440-4|BRD2	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	10016	4073	14086
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14092	37.212	NaN	2110.3	30	0	497.07	0.036	+			29115	NTSDFVYLK	9	58	543.7762828416642	1085.5380127501282	2	543.7772827148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NTSDFVYLK_	ENSG00000075711|ENST00000667157|DLG1;ENST00000471733.5_1_3:196807912-197024075:-|nuORF;nc|ENSG00000075711|Q12959-2|DLG1;nc|ENSG00000075711|Q12959-3|DLG1;nc|ENSG00000075711|Q12959-5|DLG1;nc|ENSG00000075711|Q12959-6|DLG1;nc|ENSG00000075711|Q12959-7|DLG1;nc|ENSG00000075711|Q12959-8|DLG1;nc|ENSG00000075711|Q12959-9|DLG1;nc|ENSG00000075711|Q12959|DLG1	47.657333605630114	0.33044192980041115	2				NaN	NaN	0	NaN	10017	4073	14086
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14093	37.212	NaN	1379.5	30	0	220.29	0.139			+	17324	IAGLTNYL	8	46	432.74445690019	863.47436086718	2	432.7447509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IAGLTNYL_	REV__tr|U7SSE4|U7SSE4_FUSNUUDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelateligaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=murEPE=3SV=1	53.351449002276354	0.5676011784961348	2				NaN	NaN	0	NaN	10018	4073	14086
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14105	37.24	NaN	3476.6	30	0	191.3	0.214	+			28029	NAAEIKLTM	9	75	495.7677379187363	989.5209229042727	2	495.76788330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAAEIKLTM_	ENSG00000174780|ENST00000642900|SRP72;ENST00000580060.1_1_18:47022337-47022472:-|nuORF;nc|ENSG00000174780|O76094-2|SRP72	72.87924865735499	0.12833875048249987	2				NaN	NaN	0	NaN	10027	4076	14104
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14106	37.243	NaN	7611.2	30	0	1431.6	0.106	+			6786	CFLSTLLSQ	9	63	506.2637142648394	1010.5128755964788	2	506.26422119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_CFLSTLLSQ_	ALPK2|p.G256Vfs*6|1|0.03|ENSG00000198796|chr18:58580011-58580012|-/AACC|frameshift_variant;ALPK2|p.K523Rfs*15|6|0.3|ENSG00000198796|chr18:58579208-58579208|T/-|frameshift_variant;ALPK2|p.L356Yfs*2|3|0.3|ENSG00000198796|chr18:58579709-58579709|A/-|frameshift_variant;ENSG00000198796|ENST00000361673|ALPK2	82.7504851949679	0.08565546331141553	2				NaN	NaN	0	NaN	10028	4076	14104
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14107	37.245	NaN	3328.3	30	0	335.94	0.106	+			28247	NDIVISKL	8	60	451.2708498044024	900.5271466756049	2	451.2713623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NDIVISKL_	ENSG00000113141|ENST00000417647|IK	154.1183686248401	0.16100587585765322	2				NaN	NaN	0	NaN	10029	4076	14104
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14108	37.247	NaN	2397.4	30	0	241.94	0.106	+			28064	NAATIKDVF	9	63	489.7661584743145	977.5177640154291	2	489.76593017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NAATIKDVF_	ENSG00000005700|ENST00000306270|IBTK;ENST00000369751.2_1_6:82901346-82950269:-|nuORF;ENST00000505222.5_1_6:82901346-82950269:-|nuORF;IBTK|p.F642Vfs*29|1|0.2|ENSG00000005700|chr6:82214507-82214508|-/C|frameshift_variant;IBTK|p.K1213Sfs*50|1|0.13|ENSG00000005700|chr6:82181966-82181966|T/-|frameshift_variant;IBTK|p.M1160*|1|0.13|ENSG00000005700|chr6:82191170-82191170|T/-|frameshift_variant;IBTK|p.Q590Sfs*9|1|0.41|ENSG00000005700|chr6:82214663-82214664|-/A|frameshift_variant;IBTK|p.Y96Mfs*11|1|0.09|ENSG00000005700|chr6:82240201-82240201|A/-|frameshift_variant;nc|ENSG00000005700|Q9P2D0-2|IBTK	72.87924865735499	0.12833875048249987	2				NaN	NaN	0	NaN	10030	4076	14104
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14109	37.249	NaN	1766.2	30	0	134.42	0.106	+			26842	LVVGIDLKN	9	61	485.8001593223655	NaN	0	485.8179931640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LVVGIDLKN_	ENSG00000042286|ENST00000307864|AIFM2;nc|ENSG00000042286|Q9BRQ8-2|AIFM2	60.97194046774394	0.14517358171632622	2				NaN	NaN	0	NaN	10031	4076	14104
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14110	37.251	NaN	1546.7	30	0	112.88	0.035			+	-1	SGNWCCEF	8	56	501.67528313089053	1001.3360133285811	2	502.17724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_SGNWCC(Carbamidomethyl (C))EF_	REV__ABHD12-PPP2R2A|1|fusion;REV__ENSG00000175470|ENST00000455566|PPP2R2D;REV__ENSG00000221914|ENST00000380737|PPP2R2A;REV__ENST00000490777.2_10:133754324-133769464:+|nuORF;REV__ENST00000517754.1_1_8:26221160-26227926:+|nuORF;REV__nc|ENSG00000221914|P63151-2|PPP2R2A;REV__PPP2R2A|p.F343V|1|0.14|ENSG00000221914|chr8:26366369-26366369|T/G|missense_variant	30.503639358989545	0.7238069182250283	2				NaN	NaN	0	NaN	10032	4076	14104
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14111	37.251	NaN	1289.8	30	0	151.98	0.142	+			11891	FTPTEATSIVA	11	57	568.7958851046872	NaN	0	568.7958984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FTPTEATSIVA_	ENSG00000130449|ENST00000252744|ZSWIM6;ENSG00000162415|ENST00000359600|ZSWIM5	32.81241826257853	0.4191849651971536	2				NaN	NaN	0	NaN	10033	4076	14104
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14122	37.278	NaN	4720.4	30	0	405.32	0.214				-1	 	0	58	460.77563197122777	919.5367110092556	2	460.7759094238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10041	4079	14121
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14123	37.282	NaN	5041.7	30	0	347.03	0.106	+			45601	TYPDVNNSI	9	78	511.7424496382551	1021.4703463433102	2	511.7425231933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TYPDVNNSI_	ENSG00000122958|ENST00000263559|VPS26A;nc|ENSG00000122958|O75436-2|VPS26A	82.7504851949679	0.08565546331141553	2				NaN	NaN	0	NaN	10042	4079	14121
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14124	37.284	NaN	4762.9	30	0	730.23	0.106			+	23917	LDLMTLNVL	9	66	516.2932689134353	1030.5719848936706	2	516.294189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LDLMTLNVL_	REV__ENSG00000127083|ENST00000375550|OMD	71.87747018426188	0.13267044672804276	2				NaN	NaN	0	NaN	10043	4079	14121
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14125	37.285	NaN	5464.6	30	0	900.68	0.106	+			41587	SVQGIIIYR	9	62	524.8106436848884	1047.6067344365767	2	524.8123168945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVQGIIIYR_	ENSG00000005022|ENST00000317881|SLC25A5;ENSG00000151729|ENST00000281456|SLC25A4;ENSG00000169100|ENST00000381401|SLC25A6;ENST00000406156.2_1_6:121975405-121975696:+|nuORF;ENST00000435239.1_1_7:32511604-32512018:+|nuORF	114.8945686534367	0.024290463251177924	2				NaN	NaN	0	NaN	10044	4079	14121
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14126	37.287	NaN	4579.4	30	0	1957.5	0.036	+			32271	QTLSTQLWK	9	62	552.8052223048002	1103.5958916764002	2	552.8070678710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QTLSTQLWK_	ENSG00000112305|ENST00000370455|SMAP1;nc|ENSG00000112305|Q8IYB5-2|SMAP1	72.2432373244024	0.13108886737667413	2				NaN	NaN	0	NaN	10045	4079	14121
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14137	37.312	NaN	4995	30	0	1342.6	0.214				-1	 	0	54	466.27614599656835	930.5377390599367	2	466.2765197753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10053	4082	14136
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14138	37.316	NaN	3674.2	30	0	427.4	0.106	+			44968	TVCDLVLGK	9	66	502.774194847992	1003.5338367627841	2	502.7760009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_TVC(Carbamidomethyl (C))DLVLGK_	ENST00000482547.1_1_10:131265539-131334642:+|nuORF;ENST00000482653.1_1_10:131265539-131362121:+|nuORF	77.31757898189308	0.1091473830098891	2				NaN	NaN	0	NaN	10054	4082	14136
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14139	37.318	NaN	2161.9	30	0	169.32	0.106			+	8269	EAGTPIKKM	9	55	495.7677379187363	989.5209229042727	2	495.7685241699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_EAGTPIKKM(Oxidation (M))_	REV__ENSG00000050438|ENST00000453097|SLC4A8;REV__ENST00000319957.10_1_12:51818771-51890959:+|nuORF;REV__ENST00000547697.6_1_12:51844670-51855120:+|nuORF;REV__nc|ENSG00000050438|Q2Y0W8-2|SLC4A8;REV__nc|ENSG00000050438|Q2Y0W8-3|SLC4A8;REV__nc|ENSG00000050438|Q2Y0W8-4|SLC4A8;REV__nc|ENSG00000050438|Q2Y0W8-5|SLC4A8;REV__nc|ENSG00000050438|Q2Y0W8-6|SLC4A8;REV__nc|ENSG00000050438|Q2Y0W8-7|SLC4A8;REV__nc|ENSG00000050438|Q2Y0W8-8|SLC4A8;REV__SLC4A8|p.F597Lfs*4|1|0.04|ENSG00000050438|chr12:51471417-51471417|T/-|frameshift_variant	40.77816245573522	0.41113185337114944	2				NaN	NaN	0	NaN	10055	4082	14136
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14140	37.32	NaN	2723.9	30	0	434.72	0.033			+	26015	LSLAQLKP	8	46	435.27575684492643	868.5369607566529	2	435.2760009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSLAQLKP_	REV__ENSG00000153558|ENST00000484457|FBXL2;REV__ENST00000422741.5_1_3:33414627-33427097:+|nuORF;REV__ENST00000432809.5_1_3:33339416-33427097:+|nuORF;REV__nc|ENSG00000153558|Q9UKC9-2|FBXL2	37.15910966729921	0.6739408393984688	2				NaN	NaN	0	NaN	10056	4082	14136
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14152	37.345	NaN	7807.8	30	0	966.73	0.214	+			160	AAISLAFSK	9	67	454.2655207599278	906.5164885866557	2	454.2657165527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAISLAFSK_	ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A;TOP2A|p.K1199Efs*11|1|0.23|ENSG00000131747|chr17:40396408-40396409|-/C|frameshift_variant;TOP2A|p.T1205Hfs*19|4|0.35|ENSG00000131747|chr17:40396390-40396390|T/-|frameshift_variant	124.08010499294276	0.018729767491916592	2				NaN	NaN	0	NaN	10065	4085	14151
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14153	37.349	NaN	5349.3	30	0	595.91	0.106			+	45636	TYRFDGTY	8	73	511.73342331148666	1021.4522936897733	2	511.7332458496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TYRFDGTY_	REV__DCLRE1B|p.K420Rfs*3|1|0.23|ENSG00000118655|chr1:113911848-113911848|A/-|frameshift_variant;REV__ENSG00000118655|ENST00000650450|DCLRE1B	68.78682469695295	0.41700713582915416	2				NaN	NaN	0	NaN	10066	4085	14151
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14154	37.35	NaN	4651.3	30	0	1248.8	0.106				-1	 	0	50	372.717177033773	743.419801134346	2	372.7174377441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10067	4085	14151
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14155	37.352	NaN	1678.9	30	0	153.59	0.106	+			40317	STSTISSSNN	10	62	499.22748618052424	NaN	0	499.22711181640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STSTISSSNN_	ENSG00000078687|ENST00000696270|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;TNRC6C|p.E657Rfs*3|1|0.32|ENSG00000078687|chr17:78051026-78051026|G/-|frameshift_variant;TNRC6C|p.G923Dfs*6|2|0.46|ENSG00000078687|chr17:78067906-78067906|A/-|frameshift_variant;TNRC6C|p.K926Rfs*3|1|0.18|ENSG00000078687|chr17:78067919-78067919|A/-|frameshift_variant;TNRC6C|p.N615Kfs*8|1|0.25|ENSG00000078687|chr17:78050898-78050899|-/A|frameshift_variant;TNRC6C|p.N615Mfs*45|3|0.36|ENSG00000078687|chr17:78050899-78050899|A/-|frameshift_variant	30.317721548370564	0.4006274431774794	2				NaN	NaN	0	NaN	10068	4085	14151
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14156	37.354	NaN	1537.2	30	0	172.2	0.033			+	172	AAIVGGLAIL	10	52	449.29130768968	896.5680624461601	2	449.2912902832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AAIVGGLAIL_	REV__ENSG00000180425|ENST00000623205|C11orf71	44.53106598305862	0.5073935772121767	2				NaN	NaN	0	NaN	10069	4085	14151
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14167	37.379	NaN	14450	30	0	4715.4	0.214				-1	 	0	69	550.7750736570465	1099.535594380893	2	550.7763061523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10077	4088	14166
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14168	37.383	NaN	4681.5	30	0	621.86	0.106	+			26336	LSWVFLAGI	9	67	503.2915860241678	1004.5686191151357	2	503.29156494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSWVFLAGI_	nc|ENSG00000211944|A0A0C4DH30|IGHV3-16	57.81127852772723	0.2318599694398087	2				NaN	NaN	0	NaN	10078	4088	14166
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14169	37.385	NaN	2508.9	30	0	392.91	0.106				-1	 	0	49	379.7249656177002	757.4353783022004	2	379.72509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10079	4088	14166
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14170	37.386	NaN	2263.3	30	0	261.39	0.037	+			24360	LFNRRRER	8	69	573.8344995877276	1145.654446242255	2	573.8345947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LFNRRRER_	ENSG00000158516|ENST00000222481|CPA2	34.172542307311794	0.6954784234644539	2				NaN	NaN	0	NaN	10080	4088	14166
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14181	37.412	NaN	6655.9	30	0	1234.7	0.214				-1	 	0	67	436.7757173475545	871.5368817619091	2	436.77587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10088	4091	14180
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14182	37.415	NaN	7609.6	30	0	1740.3	0.106			+	26365	LTCLTELIK	9	66	545.8115567431051	1089.6085605530102	2	545.8131713867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LTC(Carbamidomethyl (C))LTELIK_	REV__ENSG00000158863|ENST00000289921|FHIP2B;REV__ENST00000488968.1_1_8:21953801-21954290:+|nuORF;REV__ENST00000498344.2_1_8:21946698-21954290:+|nuORF	113.41158876095287	0.025516849225023126	2				NaN	NaN	0	NaN	10089	4091	14180
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14183	37.417	NaN	2664.8	30	0	273.67	0.106	+			28788	NPFEKGDLY	9	68	541.7607266200882	1081.5069003069764	2	541.7618408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NPFEKGDLY_	ENSG00000069345|ENST00000317089|DNAJA2;ENST00000569553.1_1_16:46992902-46993307:-|nuORF	56.72105179125745	0.24094814563026265	2				NaN	NaN	0	NaN	10090	4091	14180
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14184	37.419	NaN	1053.7	30	0	71.615	0.034			+	50603	YDQAVLKM	8	54	484.2499041533194	NaN	0	484.2492980957031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YDQAVLKM_	REV__ENSG00000105122|ENST00000343625|RASAL3;REV__ENST00000597025.1_1_19:15567220-15568129:-|nuORF;REV__nc|ENSG00000105122|Q86YV0-2|RASAL3	60.97194046774394	1.7418937515398478	2				NaN	NaN	0	NaN	10091	4091	14180
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14196	37.444	NaN	6186.5	30	0	1776.3	0.214	+			2090	ALFDGVVSK	9	64	468.26312655144955	934.5117001696991	2	468.2631530761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ALFDGVVSK_	ENSG00000151806|ENST00000281543|GUF1;ENST00000506793.5_1_4:44680541-44700695:+|nuORF;GUF1|p.K645Sfs*2|5|0.23|ENSG00000151806|chr4:44698598-44698598|A/-|frameshift_variant	77.31757898189308	0.1091473830098891	2				NaN	NaN	0	NaN	10100	4094	14195
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14197	37.448	NaN	2630.3	30	0	170.79	0.106	+			37264	SLAEFVVQK	9	71	510.7896465134747	1019.5647400937494	2	510.7901916503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLAEFVVQK_	DNAJC13|p.G1667Vfs*22|1|0.33|ENSG00000138246|chr3:132505410-132505410|A/-|frameshift_variant;DNAJC13|p.I470Tfs*3|1|0.04|ENSG00000138246|chr3:132457327-132457328|-/CATTT|frameshift_variant;DNAJC13|p.T1375Hfs*28|1|0.18|ENSG00000138246|chr3:132496626-132496626|A/-|frameshift_variant;ENSG00000138246|ENST00000260818|DNAJC13	58.2462437865262	0.22823408064396822	2				NaN	NaN	0	NaN	10101	4094	14195
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14198	37.45	NaN	1692.8	30	0	378.29	0.106			+	9607	ELLTFEFPS	9	35	361.51851072972204	1081.533702789366	3	361.5185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ELLTFEFPS_	REV__ENST00000487416.6_1_19:16756829-16756907:-|nuORF	17.364965105453717	0.6112419832031293	2				NaN	NaN	0	NaN	10102	4094	14195
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14199	37.452	NaN	1873.4	30	0	127.02	0.106	+			49225	VVNGRVLEL	9	54	499.8025158754797	997.5904788177594	2	499.8029479980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVNGRVLEL_	ENSG00000135597|ENST00000450536|REPS1;ENST00000531675.1_1_6:139272213-139308858:-|nuORF;nc|ENSG00000135597|Q96D71-2|REPS1;nc|ENSG00000135597|Q96D71-3|REPS1;nc|ENSG00000135597|Q96D71-4|REPS1;REPS1|p.F519Yfs*3|1|0.21|ENSG00000135597|chr6:138917599-138917600|AA/-|frameshift_variant;REPS1|p.P550Lfs*14|1|0.22|ENSG00000135597|chr6:138915929-138915929|G/-|frameshift_variant	44.116797842482775	0.37197099687881774	2				NaN	NaN	0	NaN	10103	4094	14195
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14200	37.454	NaN	2316.6	30	0	173.08	0.106				-1	 	0	64	476.2373656913277	950.4601784494554	2	476.2370300292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10104	4094	14195
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14201	37.455	NaN	1597.3	30	0	130.26	0.106	+			30189	PSLILLHEA	9	60	496.79130944611467	991.5680659590294	2	496.7906799316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PSLILLHEA_	ENST00000368680.3_1_1:153651158-153651548:+|nuORF	30.503639358989545	0.5181749237905803	2				NaN	NaN	0	NaN	10105	4094	14195
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14202	37.457	NaN	1292.2	30	0	124.2	0.034	+			46899	VISLEGKPL	9	53	478.29411531256756	954.5736776919351	2	478.7949523925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VISLEGKPL_	ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65622809-65623088:-|nuORF	58.78195531508484	0.22376836668196862	2				NaN	NaN	0	NaN	10106	4094	14195
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14210	37.477	NaN	6830	30	0	1127.4	0.214				-1	 	0	69	483.2680238981278	964.5214948630556	2	483.2685241699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10111	4097	14209
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14211	37.481	NaN	3377	30	0	490.49	0.106	+			23552	LAKVGIAL	8	55	392.767815360355	783.52107778751	2	392.7682189941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LAKVGIAL_	ENSG00000089154|ENST00000300648|GCN1	86.93460362436232	0.2867499496721195	2				NaN	NaN	0	NaN	10112	4097	14209
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14212	37.482	NaN	3509.2	30	0	504.43	0.106	+			45457	TYADTLNHL	9	65	524.2579333121599	1046.5013136911198	2	524.259521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TYADTLNHL_	ENSG00000151779|ENST00000281513|NBAS;nc|ENSG00000151779|A2RRP1-2|NBAS	65.46538089061403	0.16805504838372562	2				NaN	NaN	0	NaN	10113	4097	14209
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14213	37.484	NaN	3035.9	30	0	246.43	0.106	+			32216	QTAKESIVF	9	60	511.77934192742003	1021.5441309216401	2	511.7799377441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QTAKESIVF_	nc|ENSG00000291014|Q9Y6N3|CLCA3P	53.351449002276354	0.2690372970092375	2				NaN	NaN	0	NaN	10114	4097	14209
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14214	37.486	NaN	1613	30	0	178.67	0.106			+	26739	LVLTKEKL	8	65	472.3124325824803	942.6103122317606	2	472.3125305175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LVLTKEKL_	REV__ENST00000566201.6_1_16:46508202-46534771:-|nuORF;REV__ENST00000571006.5_1_16:46521999-46540142:-|nuORF	71.29570347882199	0.39610197767395533	2				NaN	NaN	0	NaN	10115	4097	14209
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14215	37.488	NaN	6108	30	0	1697.7	0.106				-1	 	0	71	527.2893313529967	1052.5641097727932	2	527.2906494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10116	4097	14209
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14216	37.49	NaN	1050.6	30	0	134.49	0.033				-1	 	0	40	427.7052102694278	853.3958676056557	2	427.70550537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10117	4097	14209
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14227	37.513	NaN	60159	30	0	18398	0.214	+			41701	SVSDLFNTK	9	92	505.76091546079283	1009.5072779883857	2	505.7611083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSDLFNTK_	ENSG00000054654|ENST00000555002|SYNE2;ENST00000557005.1_1_14:64469755-64489638:+|nuORF;nc|ENSG00000054654|Q8WXH0|SYNE2;SYNE2|p.A5240Qfs*5|1|0.07|ENSG00000054654|chr14:64152639-64152639|G/-|frameshift_variant;SYNE2|p.D3074Ffs*8|1|0.07|ENSG00000054654|chr14:64053132-64053133|-/TTTCTTTTTCAAATACTTG|frameshift_variant;SYNE2|p.F2563Ifs*28|1|0.34|ENSG00000054654|chr14:64051593-64051594|-/A|frameshift_variant;SYNE2|p.F2840Lfs*3|1|0.38|ENSG00000054654|chr14:64052427-64052427|T/-|frameshift_variant;SYNE2|p.F4992Lfs*13|1|0.39|ENSG00000054654|chr14:64140067-64140067|T/-|frameshift_variant;SYNE2|p.L5308Ifs*18|1|0.12|ENSG00000054654|chr14:64158750-64158751|GG/-|frameshift_variant;SYNE2|p.S1830Kfs*9|1|0.34|ENSG00000054654|chr14:64021985-64021986|-/A|frameshift_variant;SYNE2|p.S6651Rfs*83|1|0.29|ENSG00000054654|chr14:64220596-64220597|-/G|frameshift_variant	146.78539889680295	0.007618400906539062	2				NaN	NaN	0	NaN	10125	4100	14226
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14228	37.517	NaN	3853.5	30	0	571.25	0.106	+			41448	SVNLSNVLK	9	61	487.28731464179765	972.5600763503953	2	487.2875671386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVNLSNVLK_	ENSG00000198373|ENST00000359154|WWP2;nc|ENSG00000198373|O00308-4|WWP2;WWP2|p.N150Mfs*7|1|0.06|ENSG00000198373|chr16:69840233-69840234|-/TGCTTTCTCC|frameshift_variant	56.43379154798735	0.2433427591689151	2				NaN	NaN	0	NaN	10126	4100	14226
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14229	37.519	NaN	1793.4	30	0	338.91	0.106			+	10066	ESHELAALL	9	61	491.76220703125	NaN	0	491.76220703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ESHELAALL_	REV__ENSG00000258366|ENST00000360203|RTEL1;REV__ENST00000480273.5_1_20:62319266-62327135:+|nuORF;REV__ENST00000496281.1_1_20:62321467-62323226:+|nuORF;REV__nc|ENSG00000258366|Q9NZ71-2|RTEL1;REV__nc|ENSG00000258366|Q9NZ71-4|RTEL1;REV__nc|ENSG00000258366|Q9NZ71-5|RTEL1;REV__nc|ENSG00000258366|Q9NZ71-7|RTEL1;REV__nc|ENSG00000258366|Q9NZ71-8|RTEL1;REV__nc|ENSG00000258366|Q9NZ71-9|RTEL1;REV__nc|ENSG00000258366|Q9NZ71|RTEL1	30.503639358989545	0.3235605894931338	2				NaN	NaN	0	NaN	10127	4100	14226
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14230	37.521	NaN	1577.5	30	0	145.41	0.036	+			31739	QPAPCPLNY	9	66	530.249094158884	1058.4836353845678	2	530.2495727539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_QPAPC(Carbamidomethyl (C))PLNY_	ENSG00000103365|ENST00000309859|GGA2	53.351449002276354	0.2690372970092375	2				NaN	NaN	0	NaN	10128	4100	14226
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14242	37.546	NaN	3389.1	30	0	409.46	0.214	+			44389	TSLKFFLNK	9	71	549.3205853055408	1096.6266176778815	2	549.3214111328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSLKFFLNK_	ENSG00000164292|ENST00000379982|RHOBTB3;RHOBTB3|p.K539Rfs*53|1|0.25|ENSG00000164292|chr5:95783952-95783952|A/-|frameshift_variant	96.66504779109242	0.04607440320619715	2				NaN	NaN	0	NaN	10137	4103	14241
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14243	37.55	NaN	3299.7	30	0	344.61	0.106	+			36487	SEVVDVAKL	9	63	480.27326012315285	958.5319673131057	2	480.2732849121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEVVDVAKL_	ENSG00000145555|ENST00000513610|MYO10;nc|ENSG00000145555|Q9HD67-3|MYO10	90.60085204095205	0.06317133949006545	2				NaN	NaN	0	NaN	10138	4103	14241
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14244	37.551	NaN	4658.8	30	0	686.8	0.106				-1	 	0	66	538.3012682285965	1074.587983523993	2	538.302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10139	4103	14241
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14245	37.553	NaN	1726.9	30	0	321.11	0.106				-1	VQAVKNTAMF	10	56	562.7911276943709	1123.5677024555416	2	562.7924194335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_VQAVKNTAM(Oxidation (M))F_	ENSG00000183091|ENST00000397345|NEB;nc|ENSG00000183091|P20929-1|NEB;nc|ENSG00000183091|P20929-3|NEB;nc|ENSG00000183091|P20929-4|NEB;NEB|p.K715Nfs*8|1|0.06|ENSG00000183091|chr2:151691930-151691930|T/-|frameshift_variant;NEB|p.L4198Cfs*51|1|0.35|ENSG00000183091|chr2:151568357-151568357|G/-|frameshift_variant;NEB|p.N3442Tfs*4|1|0.2|ENSG00000183091|chr2:151618297-151618297|T/-|frameshift_variant;NEB|p.P541Lfs*16|1|0.49|ENSG00000183091|chr2:151695630-151695630|G/-|frameshift_variant;NEB|p.P928Lfs*29|1|0.38|ENSG00000183091|chr2:151684830-151684830|G/-|frameshift_variant	37.15910966729921	0.575322462179216	2				NaN	NaN	0	NaN	10140	4103	14241
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14246	37.555	NaN	3390	30	0	555.33	0.106	+			49269	VVQDGITLITK	11	66	593.8552851913842	1185.6960174495682	2	593.8560180664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVQDGITLITK_	ENSG00000079246|ENST00000392132|XRCC5	100.08592035916087	0.060509483168783906	2				NaN	NaN	0	NaN	10141	4103	14241
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14247	37.557	NaN	2043.5	30	0	135.94	0.106	+			47563	VRDIFLDD	8	66	496.75601336566774	NaN	0	496.7574462890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VRDIFLDD_	ENSG00000165417|ENST00000553612|GTF2A1	87.75429964447693	1.7418937515398478	2				NaN	NaN	0	NaN	10142	4103	14241
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14248	37.559	NaN	1298.2	30	0	130.77	0.037	+			12703	GEKPAKLCVIA	11	37	376.8859138728227	NaN	0	376.550537109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GEKPAKLCVIA_	ENSG00000171497|ENST00000307720|PPID	22.561587123415745	0.456735970842152	2				NaN	NaN	0	NaN	10143	4103	14241
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14258	37.582	NaN	11232	30	0	1649.8	0.214	+			35898	SEFKAMDSI	9	81	514.2412762152957	1026.4679994973912	2	514.2418823242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEFKAMDSI_	CTNNA1|p.L897I|1|0.68|ENSG00000044115|chr5:138934057-138934057|C/A|missense_variant;ENSG00000044115|ENST00000302763|CTNNA1;ENST00000522792.1_1_5:138268134-138269775:+|nuORF;nc|ENSG00000044115|P35221-2|CTNNA1;nc|ENSG00000044115|P35221-3|CTNNA1	138.06239232086	0.011389075116295402	2				NaN	NaN	0	NaN	10150	4106	14257
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14259	37.586	NaN	9903.5	30	0	3370.8	0.106	+			30634	QASSQTLTL	9	64	474.752937479339	947.491322025478	2	474.753173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QASSQTLTL_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	88.17693792209575	0.07000514020414955	2				NaN	NaN	0	NaN	10151	4106	14257
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14260	37.588	NaN	684.78	30	0	52.857	0.106				-1	SMQSAQGL	8	35	419.1920047818119	836.3694566304238	2	419.1925354003906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_SM(Oxidation (M))QSAQGL_	ENSG00000086827|ENST00000200135|ZW10;nc|ENSG00000086827|O43264-2|ZW10	23.04248740728303	0.7814162927298575	2				NaN	NaN	0	NaN	10152	4106	14257
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14261	37.589	NaN	1399.8	30	0	101.39	0.106	+			51003	YIVSNSANL	9	59	490.7564490459751	NaN	0	490.755859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YIVSNSANL_	ENSG00000105483|ENST00000651546|CARD8;ENST00000517510.5_1_19:48707456-48744240:-|nuORF;ENST00000522051.5_1_19:48714969-48735770:-|nuORF;ENST00000522773.5_1_19:48714969-48736545:-|nuORF;nc|ENSG00000105483|Q9Y2G2-1|CARD8;nc|ENSG00000105483|Q9Y2G2-2|CARD8;nc|ENSG00000105483|Q9Y2G2-3|CARD8;nc|ENSG00000105483|Q9Y2G2-4|CARD8;nc|ENSG00000105483|Q9Y2G2-7|CARD8	35.61828744233558	0.29773779453147337	2				NaN	NaN	0	NaN	10153	4106	14257
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14262	37.591	NaN	3223	30	0	550.88	0.106	+			17570	IEALLHTV	8	51	448.2655897855904	894.5166266379808	2	448.2655944824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IEALLHTV_	ENSG00000241258|ENST00000395326|CRCP;ENST00000492264.1_1_7:65615923-65617341:+|nuORF;nc|ENSG00000241258|O75575-2|CRCP;nc|ENSG00000241258|O75575-3|CRCP;nc|ENSG00000241258|O75575-4|CRCP	60.97194046774394	0.49215940876911696	2				NaN	NaN	0	NaN	10154	4106	14257
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14263	37.593	NaN	1441.9	30	0	295.72	0.037			+	37038	SIRIIYKHA	9	38	367.5571594238281	NaN	0	367.5571594238281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SIRIIYKHA_	REV__ENSG00000016490|ENST00000394711|CLCA1	19.1035232394073	0.3723251548669699	2				NaN	NaN	0	NaN	10155	4106	14257
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14277	37.623	NaN	4704.7	30	0	1450.7	0.214	+			307	AAPLRLIAA	9	53	448.2892660430704	894.5639791529409	2	448.28961181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAPLRLIAA_	ENSG00000112159|ENST00000369393|MDN1;MDN1|p.D409Rfs*22|1|0.16|ENSG00000112159|chr6:89789788-89789789|-/G|frameshift_variant;MDN1|p.E2692*|2|0.32|ENSG00000112159|chr6:89706133-89706134|-/A|frameshift_variant;MDN1|p.F2691Lfs*7|2|0.37|ENSG00000112159|chr6:89706134-89706134|A/-|frameshift_variant;MDN1|p.K2642Nfs*17|2|0.29|ENSG00000112159|chr6:89707449-89707449|T/-|frameshift_variant;MDN1|p.L4077Cfs*15|1|0.16|ENSG00000112159|chr6:89680625-89680625|G/-|frameshift_variant;MDN1|p.L5278Ffs*6|1|0.18|ENSG00000112159|chr6:89652273-89652274|-/A|frameshift_variant;MDN1|p.N20D|1|0.19|ENSG00000112159|chr6:89819550-89819550|T/C|missense_variant	38.80614096846853	0.43426287593479557	2				NaN	NaN	0	NaN	10166	4109	14276
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14278	37.626	NaN	2479.4	30	0	330.37	0.106				-1	 	0	61	460.77563197122777	919.5367110092556	2	460.77581787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10167	4109	14276
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14279	37.628	NaN	1938.6	30	0	352.05	0.106			+	32251	QTKVWFNI	8	67	518.285278524943	NaN	0	518.2861328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QTKVWFNI_	REV__SERPINB2|p.S171F|1|0.39|ENSG00000197632|chr18:63897821-63897821|C/T|missense_variant	24.20275056022122	1.7418937515398478	2				NaN	NaN	0	NaN	10168	4109	14276
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14280	37.63	NaN	3509.1	30	0	520.82	0.106			+	9680	ELVQGAKLL	9	61	485.8001593223655	NaN	0	485.7998962402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ELVQGAKLL_	REV__CON__Q3KUS7	37.81151784470057	0.28666463014928195	2				NaN	NaN	0	NaN	10169	4109	14276
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14281	37.632	NaN	1908.3	30	0	202.67	0.106	+			26116	LSPCLHRS	8	58	456.7389221191406	NaN	0	456.7389221191406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSPCLHRS_	ENSG00000121104|ENST00000240364|FAM117A;FAM117A|p.V445Cfs*7|1|0.22|ENSG00000121104|chr17:49711284-49711284|C/-|frameshift_variant	42.396135135203025	1.7418937515398478	2				NaN	NaN	0	NaN	10170	4109	14276
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14282	37.634	NaN	2519.7	30	0	547.71	0.034			+	18128	ILGGPVATVK	10	56	477.80253520895207	953.5905174847042	2	477.80157470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ILGGPVATVK_	REV__ENSG00000178828|ENST00000375121|RNF186	54.776311868738084	0.41334902933431344	2				NaN	NaN	0	NaN	10171	4109	14276
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14293	37.659	NaN	2191.6	30	0	273.4	0.214				-1	 	0	57	472.29432550526343	942.5740980773269	2	472.2940368652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10179	4112	14292
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14294	37.662	NaN	2083	30	0	1179.9	0.106				-1	 	0	47	605.3675591918833	1813.0808481758497	3	605.3682250976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10180	4112	14292
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14295	37.664	NaN	1504.3	30	0	171.8	0.034	+			7711	DLQTLNVQ	8	50	465.7481431228586	NaN	0	465.7482604980469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DLQTLNVQ_	ENSG00000183580|ENST00000504595|FBXL7;nc|ENSG00000183580|Q9UJT9-2|FBXL7	29.14955571784316	1.7418937515398478	2				NaN	NaN	0	NaN	10181	4112	14292
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14307	37.69	NaN	8687	30	0	1688.3	0.214			+	25813	LSDALQPIN	9	66	485.7635686157193	NaN	0	485.76361083984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSDALQPIN_	REV__ENSG00000073921|ENST00000393346|PICALM;REV__ENST00000528411.1_1_11:85734561-85780352:-|nuORF;REV__nc|ENSG00000073921|Q13492-2|PICALM;REV__nc|ENSG00000073921|Q13492-3|PICALM;REV__nc|ENSG00000073921|Q13492-4|PICALM;REV__nc|ENSG00000073921|Q13492-5|PICALM;REV__PICALM|p.L275Gfs*3|1|0.14|ENSG00000073921|chr11:86003436-86003437|-/TTCC|frameshift_variant	58.78195531508484	0.1545138866451181	2				NaN	NaN	0	NaN	10190	4115	14306
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14308	37.693	NaN	3048.7	30	0	287.09	0.106	+			43769	TLHAWIRY	8	67	530.2888503598233	1058.5631477864465	2	530.290283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TLHAWIRY_	ENST00000351773.7_1_10:38384091-38384521:+|nuORF;ENST00000435805.6_1_10:43047060-43047381:-|nuORF	40.5726180659479	0.6527593143185008	2				NaN	NaN	0	NaN	10191	4115	14306
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14309	37.695	NaN	2066.9	30	0	585.86	0.106	+			46538	VFDAKPSAKT	10	62	532.2935180664062	NaN	0	532.2935180664062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VFDAKPSAKT_	ENSG00000143889|ENST00000449105|HNRNPLL;nc|ENSG00000143889|Q8WVV9-4|HNRNPLL;nc|ENSG00000143889|Q8WVV9-5|HNRNPLL	30.317721548370564	0.4006274431774794	2				NaN	NaN	0	NaN	10192	4115	14306
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14310	37.697	NaN	1970.1	30	0	223.9	0.106				-1	 	0	51	442.2837870317326	882.5530211302652	2	443.260986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10193	4115	14306
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14311	37.699	NaN	1849.1	30	0	760.43	0.106	+			41308	SVLNLVIVKK	10	45	371.5848886089988	NaN	0	371.5848693847656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVLNLVIVKK_	ENSG00000137154|ENST00000380394|RPS6;ENST00000464444.1_1_19:13005132-13005321:+|nuORF	20.030474535948922	0.4201028297492154	2				NaN	NaN	0	NaN	10194	4115	14306
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14312	37.701	NaN	1536.7	30	0	185.33	0.034			+	-1	CREQSSLG	8	49	468.7137868423168	NaN	0	468.71356201171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_C(Carbamidomethyl (C))REQSSLG_	REV__ENST00000274680.8_1_6:5261799-5368856:+|nuORF;REV__ENST00000602691.1_1_6:5261815-5368856:+|nuORF	35.61828744233558	1.7418937515398478	2				NaN	NaN	0	NaN	10195	4115	14306
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14323	37.726	NaN	1791.1	30	0	172.83	0.214	+			4131	ATEIIGAICK	10	64	509.78448486328125	NaN	0	509.78448486328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATEIIGAICK_	ENSG00000120800|ENST00000261637|UTP20;UTP20|p.A1865Sfs*12|1|0.08|ENSG00000120800|chr12:101356982-101356983|-/ATCCTTTAGTC|frameshift_variant	42.86426827375447	0.3507156137006061	2				NaN	NaN	0	NaN	10203	4118	14322
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14324	37.729	NaN	4587.8	30	0	366.79	0.106	+			25377	LPHIRCSL	8	70	469.76570737996013	937.5168618267203	2	469.7684631347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LPHIRCSL_	ENST00000550078.2_2_1:203764956-203765340:+|nuORF	47.91560031466742	0.6071945918984287	2				NaN	NaN	0	NaN	10204	4118	14322
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14325	37.731	NaN	1705.1	30	0	183.79	0.035				-1	EWNVICIT	8	66	517.7521268191912	1033.4897007051823	2	517.7525634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_EWNVIC(Carbamidomethyl (C))IT_	AGL|p.K1407Nfs*8|1|0.39|ENSG00000162688|chr1:99915441-99915441|A/-|frameshift_variant;AGL|p.N1304Ifs*10|1|0.38|ENSG00000162688|chr1:99912472-99912472|A/-|frameshift_variant;AGL|p.N1304Kfs*7|1|0.38|ENSG00000162688|chr1:99912471-99912472|-/A|frameshift_variant;ENSG00000162688|ENST00000361915|AGL;nc|ENSG00000162688|P35573-2|AGL;nc|ENSG00000162688|P35573-3|AGL	40.5726180659479	0.6527593143185008	2				NaN	NaN	0	NaN	10205	4118	14322
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14337	37.757	NaN	4606.4	30	0	1368.7	0.214				-1	 	0	65	513.2865515991116	512.2792751325115	1	513.2872924804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10214	4121	14336
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14338	37.76	NaN	4928.8	30	0	699.53	0.106	+			27924	MVANLLYEK	9	71	540.7910649418967	1079.5675769505933	2	540.792236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MVANLLYEK_	ENSG00000277791|ENST00000619426|PSMB3	88.17693792209575	0.07000514020414955	2				NaN	NaN	0	NaN	10215	4121	14336
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14339	37.762	NaN	1819.8	30	0	248.88	0.033	+			29447	PCLILALL	8	59	428.2722473144531	NaN	0	428.2722473144531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PCLILALL_	ENSG00000162267|ENST00000449956|ITIH3;ITIH3|p.G132Afs*12|1|0.07|ENSG00000162267|chr3:52797113-52797146|GGAGGAAGTTGGAGAAGTTCACAGTCTCGGTCAA/-|frameshift_variant;REV__ENST00000463377.6_2_17:61926730-61939809:+|nuORF;REV__ENST00000466125.1_1_17:61932188-61934782:+|nuORF;REV__ENST00000469014.1_1_17:61926730-61934782:+|nuORF;REV__ENST00000482005.5_1_17:61932137-61934782:+|nuORF	33.49298260027079	1.7418937515398478	2				NaN	NaN	0	NaN	10216	4121	14336
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14345	37.778	NaN	8071.2	30	0	874.62	0.214				-1	 	0	69	510.29164300532045	1018.5687330774409	2	510.2923889160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10219	4124	14344
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14346	37.782	NaN	2753.5	30	0	436.49	0.106	+			927	AEIKIQGL	8	50	436.26549916728527	870.5164454013706	2	436.2659912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEIKIQGL_	ENSG00000129003|ENST00000644861|VPS13C;nc|ENSG00000129003|Q709C8-2|VPS13C;nc|ENSG00000129003|Q709C8-3|VPS13C;nc|ENSG00000129003|Q709C8-4|VPS13C;VPS13C|p.D1169Ifs*15|1|0.38|ENSG00000129003|chr15:61962469-61962469|C/-|frameshift_variant;VPS13C|p.E2463Nfs*18|1|0.25|ENSG00000129003|chr15:61920157-61920157|C/-|frameshift_variant;VPS13C|p.N3163Sfs*6|1|0.05|ENSG00000129003|chr15:61882732-61882733|-/TTATCATCAC|frameshift_variant;VPS13C|p.P3597Lfs*3|1|0.26|ENSG00000129003|chr15:61868732-61868732|G/-|frameshift_variant	76.7741389293348	0.3504530765139327	2				NaN	NaN	0	NaN	10220	4124	14344
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14347	37.784	NaN	2116	30	0	312.42	0.106			+	-1	TEIYHQVAM	9	67	554.26088854188	1106.50722415056	2	554.2608032226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_TEIYHQVAM(Oxidation (M))_	REV__ENSG00000179295|ENST00000351677|PTPN11;REV__ENST00000404534.1_1_6:138026562-138026850:-|nuORF;REV__ENST00000506227.2_1_4:83501272-83501506:-|nuORF;REV__nc|ENSG00000179295|Q06124-1|PTPN11	42.396135135203025	0.392153681582562	2				NaN	NaN	0	NaN	10221	4124	14344
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14348	37.786	NaN	1716.1	30	0	145.59	0.034			+	6903	CLSLVVHF	8	60	459.2502872733372	NaN	0	459.25018310546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_CLSLVVHF_	REV__THE1B-int_dup1996|chr7:8345870-8347393:+|1.2346957743909006|0.2358979979729452|2.39|457.0|35|3|sense	46.76643321282427	1.7418937515398478	2				NaN	NaN	0	NaN	10222	4124	14344
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14357	37.806	NaN	7521.5	30	0	1838.4	0.214	+			37379	SLFSNVVTK	9	66	497.78157656022887	993.5486001872578	2	497.7816162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLFSNVVTK_	ATIC|p.E517Rfs*11|1|0.32|ENSG00000138363|chr2:215349139-215349151|GAGTTACTCACTG/-|frameshift_variant;ENSG00000138363|ENST00000236959|ATIC;ENST00000443953.5_1_2:216177073-216214375:+|nuORF;ENST00000446622.5_1_2:216199652-216212358:+|nuORF;ENST00000467388.1_1_2:216203501-216211697:+|nuORF;nc|ENSG00000138363|P31939-2|ATIC	83.6470233535746	0.08277643980271215	2				NaN	NaN	0	NaN	10228	4127	14356
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14358	37.809	NaN	1501.5	30	0	146.86	0.106	+			39337	STCEAVMILR	10	51	590.2966059319302	NaN	0	590.2959594726562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_STC(Carbamidomethyl (C))EAVMILR_	ENSG00000167081|ENST00000373489|PBX3;ENSG00000185630|ENST00000420696|PBX1;ENSG00000204304|ENST00000375050|PBX2;ENST00000478678.5_1_6:32154995-32157692:-|nuORF;ENST00000538998.1_1_9:128606084-128725334:+|nuORF;nc|ENSG00000167081|P40426-2|PBX3;nc|ENSG00000167081|P40426-3|PBX3;nc|ENSG00000167081|P40426-4|PBX3;nc|ENSG00000167081|P40426-5|PBX3;nc|ENSG00000185630|P40424-2|PBX1;nc|ENSG00000185630|P40424-3|PBX1	63.53385203322761	0.20542021811828953	2				NaN	NaN	0	NaN	10229	4127	14356
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14359	37.811	NaN	1432.5	30	0	128.77	0.106			+	1902	AINYDVTGAY	10	59	543.7597755014924	NaN	0	543.759521484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AINYDVTGAY_	REV__ENSG00000006788|ENST00000252172|MYH13;REV__ENSG00000109061|ENST00000226207|MYH1;REV__ENSG00000264424|ENST00000255381|MYH4;REV__MYH1|p.N889Mfs*24|1|0.19|ENSG00000109061|chr17:10504835-10504835|T/-|frameshift_variant;REV__MYH13|p.K1396Nfs*37|1|0.46|ENSG00000006788|chr17:10312751-10312751|T/-|frameshift_variant;REV__MYH4|p.N981Tfs*16|1|0.12|ENSG00000264424|chr17:10453321-10453321|T/-|frameshift_variant	44.377184641726394	0.34115073642966565	2				NaN	NaN	0	NaN	10230	4127	14356
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14360	37.813	NaN	1671.9	30	0	150.66	0.035			+	43728	TKVFIQMN	8	58	490.7643127441406	NaN	0	490.7643127441406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TKVFIQMN_	REV__ENST00000598814.1_1_19:18682694-18684218:+|nuORF	31.954861631926434	1.7418937515398478	2				NaN	NaN	0	NaN	10231	4127	14356
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14369	37.834	NaN	2902.4	30	0	297.01	0.214	+			47394	VPLKGIVSY	9	60	488.2966924364571	974.5788319397142	2	488.29693603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VPLKGIVSY_	ENSG00000138078|ENST00000409411|PREPL;nc|ENSG00000138078|Q4J6C6-2|PREPL;nc|ENSG00000138078|Q4J6C6-3|PREPL;nc|ENSG00000138078|Q4J6C6|PREPL	68.84614121027924	0.14577793175421136	2				NaN	NaN	0	NaN	10237	4130	14368
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14370	37.838	NaN	2252.1	30	0	908.65	0.106				-1	 	0	67	527.2893313529967	1052.5641097727932	2	527.2900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10238	4130	14368
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14371	37.84	NaN	2670	30	0	525.99	0.106	+			41637	SVQSGNLAL	9	55	444.74236046044814	887.4701679876963	2	444.7419128417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVQSGNLAL_	ENSG00000011304|ENST00000356948|PTBP1;ENST00000586944.5_1_19:797434-805231:+|nuORF;nc|ENSG00000011304|P26599-1|PTBP1;nc|ENSG00000011304|P26599-2|PTBP1	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	10239	4130	14368
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14372	37.842	NaN	3255.4	30	0	395.75	0.106	+			43267	TFDGKTYTF	9	70	540.2556373121616	1078.4967216911232	2	540.2569580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TFDGKTYTF_	ENSG00000198788|ENST00000675028|MUC2;nc|ENSG00000198788|Q02817|MUC2	93.19546047674547	0.05585629608842056	2				NaN	NaN	0	NaN	10240	4130	14368
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14373	37.844	NaN	1314.7	30	0	191.24	0.034	+			36759	SHLEKEPL	8	53	476.75898703964606	NaN	0	476.7596435546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SHLEKEPL_	ENSG00000154079|ENST00000370474|SDHAF4	40.77816245573522	1.7418937515398478	2				NaN	NaN	0	NaN	10241	4130	14368
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14384	37.869	NaN	9881	30	0	861.62	0.214	+			809	AEFVGVSHL	9	70	479.75316506570164	957.4917771982033	2	479.75335693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEFVGVSHL_	ENSG00000141101|ENST00000268802|NOB1;ENST00000502915.1_1_4:139481866-139482694:+|nuORF	90.36981228632155	0.0638227155548745	2				NaN	NaN	0	NaN	10249	4133	14383
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14385	37.872	NaN	7593.8	30	0	1096.1	0.106			+	7647	DKQFVLGK	8	59	467.77110000789736	933.5276470825947	2	467.77130126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DKQFVLGK_	REV__ENSG00000107960|ENST00000224950|STN1;REV__ENST00000466828.5_1_10:105642444-105658073:-|nuORF	93.19546047674547	0.2677966331495483	2				NaN	NaN	0	NaN	10250	4133	14383
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14386	37.874	NaN	2097.3	30	0	431.92	0.106	+			41839	SVSTLSFGVN	10	64	505.76091546079283	1009.5072779883857	2	505.7610168457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVSTLSFGVN_	DYSF|p.F1290Lfs*55|1|0.1|ENSG00000135636|chr2:71601522-71601522|T/-|frameshift_variant;DYSF|p.F1960Lfs*6|1|0.23|ENSG00000135636|chr2:71679165-71679165|T/-|frameshift_variant;ENSG00000135636|ENST00000410020|DYSF;nc|ENSG00000135636|O75923-10|DYSF;nc|ENSG00000135636|O75923-11|DYSF;nc|ENSG00000135636|O75923-12|DYSF;nc|ENSG00000135636|O75923-14|DYSF;nc|ENSG00000135636|O75923-15|DYSF;nc|ENSG00000135636|O75923-2|DYSF;nc|ENSG00000135636|O75923-3|DYSF;nc|ENSG00000135636|O75923-4|DYSF;nc|ENSG00000135636|O75923-5|DYSF;nc|ENSG00000135636|O75923-6|DYSF;nc|ENSG00000135636|O75923-7|DYSF;nc|ENSG00000135636|O75923-8|DYSF;nc|ENSG00000135636|O75923-9|DYSF;nc|ENSG00000135636|O75923|DYSF	31.529811441608018	0.6223461015008678	2				NaN	NaN	0	NaN	10251	4133	14383
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14387	37.876	NaN	2024.7	30	0	207.76	0.106				-1	 	0	59	482.2785723221048	962.5425917110097	2	482.7765808105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10252	4133	14383
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14388	37.878	NaN	1877.7	30	0	432.94	0.037	+			33249	RGDFCIEVGK	10	62	562.2805578703578	1122.5465628075156	2	562.2813110351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RGDFCIEVGK_	ENSG00000103024|ENST00000219302|NME3;ENST00000564252.1_1_16:1820880-1821211:-|nuORF	26.69291269510374	0.6618461711292317	2				NaN	NaN	0	NaN	10253	4133	14383
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14399	37.903	NaN	6726.1	30	0	1185	0.214				-1	 	0	72	552.3022950449961	1102.590037156792	2	552.3031616210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10261	4136	14398
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14400	37.907	NaN	4980	30	0	543.39	0.036	+			25890	LSGDALLHLI	10	73	526.310320046723	1050.6060871602458	2	526.3112182617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSGDALLHLI_	ENSG00000148482|ENST00000377369|SLC39A12;nc|ENSG00000148482|Q504Y0-3|SLC39A12;nc|ENSG00000148482|Q504Y0-4|SLC39A12;nc|ENSG00000148482|Q504Y0-5|SLC39A12	42.396135135203025	0.5270658956260207	2				NaN	NaN	0	NaN	10262	4136	14398
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14404	37.921	NaN	2355	30	0	882.05	0.214				-1	DCFFPVSY	8	60	517.7193377199825	1033.424122506765	2	517.7200317382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_DC(Carbamidomethyl (C))FFPVSY_	nc|ENSG00000188092|B7ZAQ6-4|GPR89A	28.2542754592877	0.7411748056684583	2				NaN	NaN	0	NaN	10263	4139	14403
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14405	37.924	NaN	1984.5	30	0	181.65	0.036			+	17784	IETAKITEY	9	59	534.2854037559201	NaN	0	534.2852783203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IETAKITEY_	REV__tr|U7SK63|U7SK63_FUSNUThiazolesynthaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=thiGPE=3SV=1	56.43379154798735	0.16452882468284893	2				NaN	NaN	0	NaN	10264	4139	14403
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14409	37.938	NaN	7556.9	30	0	1271.1	0.214			+	26057	LSLPSHTM	8	57	443.2280904528563	884.4416279725126	2	443.22845458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSLPSHTM_	REV__ENST00000228799.6_1_12:2933460-2933670:+|nuORF	57.81127852772723	0.5234495074909924	2				NaN	NaN	0	NaN	10265	4142	14408
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14410	37.941	NaN	4003.3	30	0	432.64	0.106	+			51065	YLKQVLGQ	8	62	474.7783693653397	947.5421857974794	2	474.7793273925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YLKQVLGQ_	ENSG00000159377|ENST00000290541|PSMB4;ENST00000476467.1_1_1:151372063-151372664:+|nuORF;ENST00000493673.1_1_1:151372075-151372920:+|nuORF;ENST00000495288.5_1_1:151372054-151373071:+|nuORF	45.9519527083369	0.6193794311207887	2				NaN	NaN	0	NaN	10266	4142	14408
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14411	37.943	NaN	3308.5	30	0	350.21	0.106	+			16267	HEGDIILKI	9	58	519.3027326078377	1036.5909122824753	2	519.30322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HEGDIILKI_	ENSG00000119139|ENST00000377245|TJP2;nc|ENSG00000119139|Q9UDY2-2|TJP2;nc|ENSG00000119139|Q9UDY2-3|TJP2;nc|ENSG00000119139|Q9UDY2-4|TJP2;nc|ENSG00000119139|Q9UDY2-5|TJP2;nc|ENSG00000119139|Q9UDY2-6|TJP2;nc|ENSG00000119139|Q9UDY2-7|TJP2;TJP2|p.F813Sfs*12|1|0.23|ENSG00000119139|chr9:69240013-69240013|T/-|frameshift_variant;TJP2|p.P484Qfs*30|1|0.18|ENSG00000119139|chr9:69228107-69228107|C/-|frameshift_variant;TJP2|p.T849Rfs*12|1|0.32|ENSG00000119139|chr9:69240120-69240120|A/-|frameshift_variant	74.1650062923329	0.12277912660386392	2				NaN	NaN	0	NaN	10267	4142	14408
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14412	37.945	NaN	2150.9	30	0	184.94	0.034	+			12461	GEDIIHQL	8	56	462.74232182772204	923.4700907222441	2	462.7422790527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEDIIHQL_	ENSG00000115368|ENST00000314761|WDR75;ENST00000436347.5_1_2:190313199-190340140:+|nuORF	56.72105179125745	0.5342425954139568	2				NaN	NaN	0	NaN	10268	4142	14408
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14416	37.958	NaN	4514.2	30	0	443.37	0.214			+	21827	KRFEVFPGK	9	70	554.3187149879055	1106.622877042611	2	554.3194580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KRFEVFPGK_	REV__ALG10B|p.A228V|1|0.15|ENSG00000175548|chr12:38320474-38320474|C/T|missense_variant	51.19269402634007	0.2889735674168909	2				NaN	NaN	0	NaN	10269	4145	14415
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14417	37.961	NaN	1070.3	30	0	190.48	0.035			+	37311	SLDLYRLK	8	56	504.29807561000393	NaN	0	504.2986145019531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLDLYRLK_	REV__ENSG00000136802|ENST00000372600|LRRC8A	38.80614096846853	1.7418937515398478	2				NaN	NaN	0	NaN	10270	4145	14415
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14421	37.975	NaN	8913.8	30	0	910.24	0.214			+	48742	VTVGETKLI	9	65	480.2917269930114	958.5689010528229	2	480.2928466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTVGETKLI_	REV__ENSG00000171766|ENST00000396659|GATM;REV__nc|ENSG00000171766|P50440-2|GATM;REV__nc|ENSG00000171766|P50440-3|GATM	77.31757898189308	0.1091473830098891	2				NaN	NaN	0	NaN	10271	4148	14420
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14422	37.978	NaN	4211.3	30	0	1206.4	0.106				-1	GQRCFHTM	8	68	526.7247671444995	1051.434981355799	2	526.7261962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_GQRC(Carbamidomethyl (C))FHTM(Oxidation (M))_	NCK2|p.R348C|1|0.41|ENSG00000071051|chr2:105893075-105893075|C/T|missense_variant	40.5726180659479	0.6527593143185008	2				NaN	NaN	0	NaN	10272	4148	14420
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14423	37.98	NaN	1776.9	30	0	312.26	0.035	+			49762	VYPTAVHVL	9	49	499.78686851426176	997.5591840953235	2	499.7870788574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYPTAVHVL_	ENSG00000112234|ENST00000369244|FBXL4	38.80614096846853	0.43426287593479557	2				NaN	NaN	0	NaN	10273	4148	14420
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14428	37.994	NaN	12904	30	0	2224.6	0.214				-1	 	0	69	512.7867203093974	1023.5588876855949	2	512.7872924804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10275	4151	14427
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14429	37.997	NaN	3021.9	30	0	384.65	0.106	+			12638	GEIKGFTGI	9	62	461.2550347456504	920.4955165581008	2	461.2550048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEIKGFTGI_	ENSG00000138801|ENST00000265174|PAPSS1;ENSG00000198682|ENST00000456849|PAPSS2;nc|ENSG00000198682|O95340|PAPSS2	82.7504851949679	0.08565546331141553	2				NaN	NaN	0	NaN	10276	4151	14427
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14430	37.999	NaN	8530.3	30	0	1297.9	0.106			+	11329	FLCKVVAW	8	64	483.26826481932494	964.5219767054499	2	483.2685852050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FLCKVVAW_	REV__ENSG00000215644|ENST00000400723|GCGR	46.76643321282427	0.6143254112625767	2				NaN	NaN	0	NaN	10277	4151	14427
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14431	38.001	NaN	2320.6	30	0	642.58	0.106	+			39288	STASFIFSK	9	63	494.26023896433924	986.5059249954785	2	494.2606506347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STASFIFSK_	ENSG00000162522|ENST00000401073|KIAA1522;nc|ENSG00000162522|Q9P206-3|NHSL3;nc|ENSG00000162522|Q9P206|NHSL3	90.60085204095205	0.06317133949006545	2				NaN	NaN	0	NaN	10278	4151	14427
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14432	38.003	NaN	2436.6	30	0	218.7	0.106	+			17123	HSNNPAHKY	9	61	534.2545279165951	1066.49450289999	2	534.255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HSNNPAHKY_	ENSG00000145934|ENST00000518659|TENM2;TENM2|p.L1355*|1|0.14|ENSG00000145934|chr5:168215255-168215255|C/-|frameshift_variant;TENM2|p.L1667Hfs*17|1|0.05|ENSG00000145934|chr5:168218890-168218891|-/ATCAGCGT|frameshift_variant;TENM2|p.N1524Tfs*20|1|0.1|ENSG00000145934|chr5:168218458-168218458|A/-|frameshift_variant	40.77816245573522	0.41113185337114944	2				NaN	NaN	0	NaN	10279	4151	14427
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14433	38.004	NaN	3066.8	30	0	647.43	0.106				-1	ATAMLQSLLK	10	65	546.3097882878269	1090.6050236424537	2	546.812744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_ATAM(Oxidation (M))LQSLLK_	ENSG00000196586|ENST00000369977|MYO6;nc|ENSG00000196586|Q9UM54-2|MYO6;nc|ENSG00000196586|Q9UM54-4|MYO6;nc|ENSG00000196586|Q9UM54-5|MYO6;nc|ENSG00000196586|Q9UM54-6|MYO6;nc|ENSG00000196586|Q9UM54|MYO6	61.76455937419982	0.3497917639301274	2				NaN	NaN	0	NaN	10280	4151	14427
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14434	38.006	NaN	1699.2	30	0	236.95	0.037	+			30323	PTRPACLLRQ	10	54	577.8262082949483	1153.6378636566965	2	577.82666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PTRPACLLRQ_	ENSG00000173662|ENST00000333172|TAS1R1;nc|ENSG00000173662|Q7RTX1-2|TAS1R1	25.57405402267927	0.6709832231498071	2				NaN	NaN	0	NaN	10281	4151	14427
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14438	38.019	NaN	29494	30	0	5497.3	0.214				-1	 	0	70	482.2785723221048	962.5425917110097	2	482.2787170410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10282	4154	14437
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14439	38.023	NaN	1487.1	30	0	160.96	0.106	+			37246	SKTTLPVL	8	49	429.76833066787316	NaN	0	429.76824951171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SKTTLPVL_	ENSG00000164241|ENST00000296662|C5orf63;ENST00000515558.1_1_5:126394507-126407313:-|nuORF;nc|nan|A6NC05|C5orf63	68.78682469695295	1.7418937515398478	2				NaN	NaN	0	NaN	10283	4154	14437
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14440	38.025	NaN	641.09	30	0	272.58	0.106			+	26731	LVLLLGRMK	9	29	348.23052978515625	NaN	0	348.23052978515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LVLLLGRMK_	REV__ENST00000287322.4_2_8:38066567-38066711:+|nuORF	45.9519527083369	0.2345902329052062	2				NaN	NaN	0	NaN	10284	4154	14437
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14441	38.027	NaN	1750.1	30	0	589.53	0.033	+			37330	SLEHVGIL	8	45	434.25034255693333	NaN	0	434.25091552734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLEHVGIL_	CEP350|p.I2751Nfs*29|1|0.24|ENSG00000135837|chr1:180094350-180094351|-/A|frameshift_variant;CEP350|p.K1725Nfs*24|1|0.43|ENSG00000135837|chr1:180053928-180053928|A/-|frameshift_variant;CEP350|p.N2889Ifs*10|1|0.38|ENSG00000135837|chr1:180095671-180095671|A/-|frameshift_variant;CEP350|p.R2078Gfs*6|1|0.43|ENSG00000135837|chr1:180084119-180084119|A/-|frameshift_variant;CEP350|p.Y2613Mfs*8|1|0.07|ENSG00000135837|chr1:180093938-180093938|T/-|frameshift_variant;ENSG00000135837|ENST00000367607|CEP350	42.47446043378293	1.7418937515398478	2				NaN	NaN	0	NaN	10285	4154	14437
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14446	38.04	NaN	3839.3	30	0	724.08	0.214				-1	 	0	58	442.2837870317326	882.5530211302652	2	442.2839660644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10287	4157	14445
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14447	38.044	NaN	2821.3	30	0	237.74	0.106			+	50610	YDVRKLKE	8	68	525.8015207355452	NaN	0	525.8010864257812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YDVRKLKE_	REV__ENST00000513853.5_1_11:28724169-28724340:+|nuORF	40.77816245573522	1.7418937515398478	2				NaN	NaN	0	NaN	10288	4157	14445
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14448	38.046	NaN	985.85	30	0	156.46	0.106				-1	VELRMAVNK	9	55	538.3012084960938	NaN	0	538.3012084960938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_VELRM(Oxidation (M))AVNK_	ENSG00000153574|ENST00000283646|RPIA	34.172542307311794	0.30503706118289736	2				NaN	NaN	0	NaN	10289	4157	14445
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14449	38.047	NaN	1636.2	30	0	395.08	0.035	+			45403	TVVAVASATY	10	59	491.2657350766029	980.5169172200058	2	491.26556396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TVVAVASATY_	tr|U7STD6|U7STD6_FUSNUSodium/glutamatesymporterOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01373PE=3SV=1	60.97194046774394	0.3570005369683776	2				NaN	NaN	0	NaN	10290	4157	14445
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14453	38.06	NaN	1746.7	30	0	198.38	0.214	+			641	AEADKIYSF	9	65	522.2554061666539	1042.4962594001076	2	522.2556762695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEADKIYSF_	ENSG00000180357|ENST00000326648|ZNF609;ZNF609|p.P882Lfs*30|1|0.33|ENSG00000180357|chr15:64675495-64675495|C/-|frameshift_variant	65.46538089061403	0.16805504838372562	2				NaN	NaN	0	NaN	10291	4160	14452
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14454	38.064	NaN	2018.5	30	0	240.9	0.106	+			27461	MLNLQIAGL	9	65	486.77967362585014	971.5447943185003	2	486.7802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MLNLQIAGL_	CEP72|p.T549M|1|0.27|ENSG00000112877|chr5:644405-644405|C/T|missense_variant	63.30626980617807	0.18605348971131092	2				NaN	NaN	0	NaN	10292	4160	14452
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14455	38.066	NaN	1281.3	30	0	101.95	0.106	+			27434	MLFYTNMY	8	59	541.7367162922365	NaN	0	541.7361450195312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MLFYTNMY_	ENSG00000139679|ENST00000620633|LPAR6;LPAR6|p.S92F|1|0.33|ENSG00000139679|chr13:48412149-48412149|G/A|missense_variant;LPAR6|p.S92P|1|0.24|ENSG00000139679|chr13:48412150-48412150|A/G|missense_variant;LPAR6|p.V233Cfs*30|1|0.79|ENSG00000139679|chr13:48411727-48411728|-/A|frameshift_variant	37.15910966729921	1.7418937515398478	2				NaN	NaN	0	NaN	10293	4160	14452
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14456	38.068	NaN	1425.5	30	0	222.41	0.034	+			12472	GEDLILHF	8	60	472.24742421100984	942.4802954888197	2	472.2463684082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEDLILHF_	DNAH10|p.D3416Mfs*54|1|0.28|ENSG00000197653|chr12:123914871-123914871|C/-|frameshift_variant;DNAH10|p.D498Tfs*15|1|0.18|ENSG00000197653|chr12:123789977-123789977|G/-|frameshift_variant;DNAH10|p.E1360*|1|0.18|ENSG00000197653|chr12:123830579-123830580|-/T|frameshift_variant;DNAH10|p.K1737Nfs*15|2|0.42|ENSG00000197653|chr12:123845799-123845799|A/-|frameshift_variant;DNAH10|p.L299Nfs*4|1|0.07|ENSG00000197653|chr12:123784024-123784025|-/AA|frameshift_variant;DNAH10|p.M516Wfs*4|1|0.11|ENSG00000197653|chr12:123790030-123790030|C/-|frameshift_variant;DNAH10|p.N2655Kfs*10|1|0.19|ENSG00000197653|chr12:123877852-123877853|-/A|frameshift_variant;DNAH10|p.N3499Ifs*2|1|0.14|ENSG00000197653|chr12:123916578-123916578|A/-|frameshift_variant;DNAH10|p.P1206Lfs*12|1|0.08|ENSG00000197653|chr12:123819219-123819219|C/-|frameshift_variant;DNAH10|p.P300Sfs*22|1|0.06|ENSG00000197653|chr12:123784026-123784027|-/CTCATCA|frameshift_variant;DNAH10|p.Q2965Kfs*11|1|0.57|ENSG00000197653|chr12:123894687-123894687|C/-|frameshift_variant;ENSG00000197653|ENST00000673944|DNAH10	35.200714571348534	0.6875396545722289	2				NaN	NaN	0	NaN	10294	4160	14452
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14461	38.082	NaN	3278.1	30	0	379.99	0.214				-1	 	0	60	466.2473903982623	930.4802278633247	2	466.2477722167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10296	4163	14460
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14462	38.086	NaN	2627	30	0	187.37	0.106	+			49965	WADQIVLQ	8	64	486.7614154141841	971.5082778951682	2	487.76898193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WADQIVLQ_	ENSG00000116212|ENST00000371370|LRRC42	49.44154591367651	0.597725784090933	2				NaN	NaN	0	NaN	10297	4163	14460
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14463	38.088	NaN	1646.1	30	0	513.02	0.106			+	33722	RPGRAAHRH	9	54	529.2976698266211	1056.5807867200422	2	529.299560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RPGRAAHRH_	REV__ASB18|p.S59Lfs*32|1|0.27|ENSG00000182177|chr2:236264171-236264172|-/G|frameshift_variant	30.503639358989545	0.5181749237905803	2				NaN	NaN	0	NaN	10298	4163	14460
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14464	38.089	NaN	1501	30	0	156.49	0.106			+	18200	IMQMDLGE	8	57	468.7137868423168	NaN	0	468.7137145996094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IMQMDLGE_	REV__ENSG00000139144|ENST00000538779|PIK3C2G;REV__nc|ENSG00000139144|O75747-2|PIK3C2G	45.9519527083369	1.7418937515398478	2				NaN	NaN	0	NaN	10299	4163	14460
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14465	38.091	NaN	2010	30	0	352.17	0.106				-1	 	0	54	458.27362523318874	914.5326975331775	2	458.2744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10300	4163	14460
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14466	38.093	NaN	2016.3	30	0	175.37	0.035	+			45301	TVSAGVPEEM	10	56	510.2393158410818	1018.4640787489636	2	510.2406005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TVSAGVPEEM_	ENST00000473758.5_1_14:23537124-23537340:-|nuORF	42.396135135203025	0.5270658956260207	2				NaN	NaN	0	NaN	10301	4163	14460
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14472	38.109	NaN	2289.2	30	0	173.15	0.214			+	36095	SEKFSQML	8	57	485.23864658814944	968.4627402430989	2	485.23895263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEKFSQML_	REV__ENSG00000197283|ENST00000646630|SYNGAP1;REV__ENST00000479510.2_1_6:33387852-33406697:+|nuORF;REV__nc|ENSG00000197283|Q96PV0-2|SYNGAP1;REV__nc|ENSG00000197283|Q96PV0-3|SYNGAP1;REV__nc|ENSG00000197283|Q96PV0-4|SYNGAP1;REV__SYNGAP1|p.F979Ifs*5|1|0.67|ENSG00000197283|chr6:33443481-33443482|-/C|frameshift_variant;REV__SYNGAP1|p.L1302Wfs*8|1|0.21|ENSG00000197283|chr6:33451772-33451772|C/-|frameshift_variant;REV__SYNGAP1|p.L813Wfs*23|1|0.11|ENSG00000197283|chr6:33442986-33442986|C/-|frameshift_variant	38.80614096846853	0.6637206697844082	2				NaN	NaN	0	NaN	10304	4166	14471
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14473	38.113	NaN	2205.9	30	0	420.61	0.035	+			12446	GECLPLPVL	9	59	499.272478102865	996.5304032725301	2	499.2730407714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GEC(Carbamidomethyl (C))LPLPVL_	ENSG00000171243|ENST00000307068|SOSTDC1;nc|ENSG00000171243|Q6X4U4-2|SOSTDC1	42.47446043378293	0.39123495718708534	2				NaN	NaN	0	NaN	10305	4166	14471
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14477	38.127	NaN	3891	30	0	624.58	0.143	+			47272	VMTGSYNNF	9	69	516.7257441676868	1031.4369354021735	2	516.7267456054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VMTGSYNNF_	ABHD12-PPP2R2A|1|fusion;ENSG00000221914|ENST00000380737|PPP2R2A;ENST00000517754.1_1_8:26221160-26227926:+|nuORF;nc|ENSG00000221914|P63151-2|PPP2R2A	49.536043120802724	0.308405419312776	2				NaN	NaN	0	NaN	10306	4169	14476
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14481	38.143	NaN	4126.2	30	0	463.97	0.213	+			49806	VYSRYFTTY	9	70	600.2899265315682	1198.5653001299363	2	600.2908325195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	95.81516180277367	0.04847050768394289	2				NaN	NaN	0	NaN	10307	4172	14480
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14482	38.146	NaN	3249.8	30	0	664.91	0.106	+			4201	ATFTNVFGK	9	56	492.7604224814674	983.5062920297348	2	492.7610778808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATFTNVFGK_	ENSG00000131503|ENST00000360839|ANKHD1;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	63.53385203322761	0.18415635464017938	2				NaN	NaN	0	NaN	10308	4172	14480
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14483	38.148	NaN	3539.4	30	0	295.02	0.106	+			8140	EAAAVFKTL	9	63	475.2707318938087	948.5269108544175	2	475.27069091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EAAAVFKTL_	ENSG00000138686|ENST00000264499|BBS7;ENST00000502444.1_1_4:122782546-122791468:-|nuORF;nc|ENSG00000138686|Q8IWZ6-2|BBS7	70.8162118820467	0.13725933411854815	2				NaN	NaN	0	NaN	10309	4172	14480
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14484	38.15	NaN	4236.4	30	0	673.16	0.106				-1	 	0	66	555.7960375791009	1109.5775222250018	2	555.7968139648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10310	4172	14480
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14485	38.152	NaN	3168.5	30	0	307.69	0.036	+			21206	KLFDFVNAK	9	69	541.3050228319312	1080.5954927306623	2	541.306396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KLFDFVNAK_	ENSG00000149136|ENST00000278412|SSRP1;ENST00000293880.9_1_11:57098199-57100416:-|nuORF	61.691277971877994	0.19951612995419254	2				NaN	NaN	0	NaN	10311	4172	14480
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14491	38.168	NaN	4972.4	30	0	642.73	0.214	+			8283	EAIGAVIHY	9	63	486.7614154141841	971.5082778951682	2	486.76104736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EAIGAVIHY_	ENSG00000020129|ENST00000373243|NCDN;nc|ENSG00000020129|Q9UBB6-2|NCDN	114.5961677871614	0.02447110773075179	2				NaN	NaN	0	NaN	10314	4175	14490
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14492	38.171	NaN	2077.4	30	0	404.79	0.106	+			29224	NVYDFKTTY	9	63	575.7738513393288	1149.5331497454574	2	575.774658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NVYDFKTTY_	ENSG00000160075|ENST00000291386|SSU72;ENST00000378725.3_1_1:1480120-1509937:-|nuORF;nc|ENSG00000160075|Q9NP77-2|SSU72;SSU72|p.L82Ffs*8|1|0.34|ENSG00000160075|chr1:1544981-1544982|-/A|frameshift_variant	54.722347961057174	0.257609425301511	2				NaN	NaN	0	NaN	10315	4175	14490
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14493	38.173	NaN	2369	30	0	493.66	0.106	+			18802	ITSREQGIRML	11	59	652.3610822294618	NaN	0	652.3610229492188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ITSREQGIRML_	nc|ENSG00000114670|Q8NG66-4|NEK11	20.83715455343099	0.456735970842152	2				NaN	NaN	0	NaN	10316	4175	14490
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14494	38.175	NaN	1320.1	30	0	237.18	0.106	+			47465	VPWEVGLANG	10	55	521.2714929742442	1040.5284330152883	2	521.2720947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VPWEVGLANG_	ENST00000355947.6_1_7:99489545-99489743:-|nuORF	27.882242232435846	0.6521336255503853	2				NaN	NaN	0	NaN	10317	4175	14490
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14495	38.177	NaN	1155.4	30	0	50.261	0.106			+	30445	PYRFKEYLWRF	11	60	535.6162719726562	NaN	0	535.6162719726562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PYRFKEYLWRF_	REV__ENSG00000167904|ENST00000434581|TMEM68	6.001044225922587	0.456735970842152	2				NaN	NaN	0	NaN	10318	4175	14490
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14496	38.179	NaN	838.3	30	0	94.785	0.106			+	41488	SVPAHNVAI	9	42	454.2522277832031	NaN	0	454.2522277832031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVPAHNVAI_	REV__ENSG00000197070|ENST00000371421|ARRDC1;REV__ENST00000491911.5_1_9:140508423-140509541:+|nuORF	37.15910966729921	0.2899585034171616	2				NaN	NaN	0	NaN	10319	4175	14490
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14497	38.181	NaN	1203.6	30	0	462.99	0.038			+	-1	FCVLLGLRFM	10	36	405.5523305576327	NaN	0	405.5531921386719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_FCVLLGLRFM(Oxidation (M))_	REV__nc|ENSG00000155719|Q7RTW8-2|OTOA	18.262085536374414	0.4201028297492154	2				NaN	NaN	0	NaN	10320	4175	14490
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14507	38.203	NaN	1977	30	0	131.03	0.214	+			50941	YHGPATVSY	9	62	497.73645175148283	NaN	0	497.7361755371094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YHGPATVSY_	ENST00000249364.8_1_7:128379460-128388729:+|nuORF	47.91560031466742	0.22105767942158736	2				NaN	NaN	0	NaN	10327	4178	14506
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14508	38.207	NaN	1612.8	30	0	295.68	0.036	+			9518	EKYDVSSQV	9	59	527.755374241732	1053.496195550264	2	527.7569580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EKYDVSSQV_	ENSG00000105851|ENST00000496166|PIK3CG	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	10328	4178	14506
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14517	38.227	NaN	2485.8	30	0	249.09	0.214	+			30378	PVPEYQKY	8	62	512.2609566503165	NaN	0	512.26123046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PVPEYQKY_	AGPS|p.F440Lfs*8|1|0.24|ENSG00000018510|chr2:177497719-177497719|T/-|frameshift_variant;ENSG00000018510|ENST00000264167|AGPS	35.200714571348534	1.7418937515398478	2				NaN	NaN	0	NaN	10334	4181	14516
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14518	38.23	NaN	4564.5	30	0	440	0.106	+			13031	GEVPGAAVLE	10	60	471.2502134610229	940.4858739888458	2	471.25048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEVPGAAVLE_	ENST00000472364.1_1_21:47976931-47978452:+|nuORF;ENST00000481883.1_1_21:47977314-47978452:+|nuORF	40.77816245573522	0.5419747034533848	2				NaN	NaN	0	NaN	10335	4181	14516
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14519	38.232	NaN	1699.1	30	0	110.55	0.034				-1	MIGNGFGPL	9	57	461.2278441533551	920.4411353735102	2	461.2285461425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))IGNGFGPL_	ENST00000375151.4_1_X:54470983-54471202:+|nuORF	50.0245360154114	0.3026755932229825	2				NaN	NaN	0	NaN	10336	4181	14516
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14528	38.252	NaN	5327.6	30	0	423.24	0.214	+			2474	APLQEKVVF	9	75	515.7995036770808	1029.5844544209615	2	515.8001708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_APLQEKVVF_	ENSG00000006831|ENST00000357103|ADIPOR2;ENSG00000159346|ENST00000340990|ADIPOR1	68.84614121027924	0.14577793175421136	2				NaN	NaN	0	NaN	10342	4184	14527
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14529	38.255	NaN	4840	30	0	231.23	0.106				-1	 	0	66	485.7995309323329	969.5845089314658	2	485.79974365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10343	4184	14527
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14530	38.257	NaN	3381.6	30	0	437.9	0.106	+			25483	LPSEIEVKY	9	67	539.2945403409941	1076.5745277487881	2	539.2953491210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LPSEIEVKY_	ANAPC7|p.K150Nfs*22|1|0.27|ENSG00000196510|chr12:110395161-110395161|T/-|frameshift_variant;ENSG00000196510|ENST00000455511|ANAPC7;ENST00000464697.1_1_12:110825679-110841468:-|nuORF;ENST00000550231.1_1_12:110825542-110834223:-|nuORF;nc|ENSG00000196510|Q9UJX3-2|ANAPC7	79.71258880314673	0.09879134589249085	2				NaN	NaN	0	NaN	10344	4184	14527
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14531	38.259	NaN	3990.5	30	0	372.8	0.106			+	48115	VSVALVIQL	9	55	471.3047694265429	940.5949859198859	2	471.3047180175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSVALVIQL_	REV__nc|ENSG00000188580|Q5VXU1-2|NKAIN2	51.33545320467046	0.2872990594074956	2				NaN	NaN	0	NaN	10345	4184	14527
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14532	38.261	NaN	2014.2	30	0	259.1	0.106	+			34709	RVVAVSPQM	9	61	501.7746458309866	NaN	0	501.7481994628906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_RVVAVSPQM(Oxidation (M))_	ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP	60.97194046774394	0.14517358171632622	2				NaN	NaN	0	NaN	10346	4184	14527
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14533	38.262	NaN	1091.3	30	0	88.937	0.037				-1	SMVLSGISCF	10	57	571.7634883812542	NaN	0	571.7633056640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))SMVLSGISC(Carbamidomethyl (C))F_	ENSG00000122012|ENST00000502798|SV2C;SV2C|p.F626S|1|0.3|ENSG00000122012|chr5:76301422-76301422|T/C|missense_variant	27.882242232435846	0.4086243523356342	2				NaN	NaN	0	NaN	10347	4184	14527
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14534	38.263	NaN	1305.1	30	0	88.148	0.14			+	48143	VSVVSLIPPT	10	60	506.30775138795974	NaN	0	506.2609558105469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VSVVSLIPPT_	REV__ENST00000374135.8_1_1:27205919-27206000:-|nuORF	34.172542307311794	0.38797011891751465	2				NaN	NaN	0	NaN	10348	4184	14527
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14540	38.281	NaN	3393.3	30	0	329.31	0.145			+	10444	EVLLRYNMI	9	75	575.8172633638965	1149.6199737945929	2	575.8179931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EVLLRYNMI_	REV__tr|U7T164|U7T164_FUSNURelEproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00707PE=3SV=1	44.116797842482775	0.37197099687881774	2				NaN	NaN	0	NaN	10351	4187	14539
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14548	38.302	NaN	2376.9	30	0	339.33	0.214	+			40857	SVFEDPVISK	10	64	560.7972177789604	1119.5798826247208	2	560.7982788085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVFEDPVISK_	ENSG00000125445|ENST00000245539|MRPS7;MRPS7|p.L162Pfs*29|1|0.05|ENSG00000125445|chr17:75263482-75263483|-/C|frameshift_variant	54.722347961057174	0.4138398245444204	2				NaN	NaN	0	NaN	10356	4190	14547
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14549	38.306	NaN	1721.3	30	0	171.07	0.106	+			44072	TPSSVIYHL	9	56	508.77388593605724	1015.5332189389145	2	508.77484130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TPSSVIYHL_	ENSG00000142185|ENST00000397928|TRPM2;nc|ENSG00000142185|O94759-2|TRPM2;nc|ENSG00000142185|O94759-3|TRPM2;TRPM2|p.A177Gfs*92|1|0.52|ENSG00000142185|chr21:44366852-44366853|-/G|frameshift_variant;TRPM2|p.A177Pfs*6|1|0.43|ENSG00000142185|chr21:44366853-44366853|G/-|frameshift_variant;TRPM2|p.A785Rfs*17|1|0.49|ENSG00000142185|chr21:44401707-44401707|C/-|frameshift_variant;TRPM2|p.V508Cfs*3|1|0.06|ENSG00000142185|chr21:44391350-44391350|G/-|frameshift_variant	47.91560031466742	0.327412564698279	2				NaN	NaN	0	NaN	10357	4190	14547
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14550	38.308	NaN	924.54	30	0	355.52	0.036	+			46017	VAVNVARVII	10	32	351.89898681640625	NaN	0	351.89898681640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VAVNVARVII_	DOCK9|p.T891A|1|0.35|ENSG00000088387|chr13:98881896-98881896|T/C|missense_variant	30.317721548370564	0.4006274431774794	2				NaN	NaN	0	NaN	10358	4190	14547
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14555	38.321	NaN	8272.4	30	0	760.41	0.214	+			43820	TLQPFSFK	8	80	484.26637806222993	966.5182031912599	2	484.2672119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TLQPFSFK_	ENSG00000153012|ENST00000382114|LGI2	44.116797842482775	0.6307669463330267	2				NaN	NaN	0	NaN	10360	4193	14554
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14556	38.325	NaN	3572	30	0	828.4	0.106			+	48749	VTVLPFGKQ	9	63	494.7963627096464	NaN	0	494.7962341308594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTVLPFGKQ_	REV__ENSG00000113441|ENST00000231368|LNPEP;REV__ENST00000473914.1_1_5:96332105-96341995:+|nuORF;REV__LNPEP|p.T870Lfs*15|1|0.37|ENSG00000113441|chr5:97024563-97024563|A/-|frameshift_variant;REV__nc|ENSG00000113441|Q9UIQ6-2|LNPEP;REV__nc|ENSG00000113441|Q9UIQ6-3|LNPEP	80.45461616416974	0.0698259577396595	2				NaN	NaN	0	NaN	10361	4193	14554
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14557	38.327	NaN	5665.6	30	0	2756.5	0.106	+			25496	LPSETIQTY	9	58	526.2683964231107	1050.5222399130214	2	526.2686157226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LPSETIQTY_	ENSG00000172086|ENST00000347055|KRCC1	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	10362	4193	14554
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14558	38.329	NaN	2738.1	30	0	341.52	0.034	+			13172	GHPVLHPR	8	53	456.7607258714992	911.5068988097984	2	456.76043701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GHPVLHPR_	MUC5B|p.E2447Vfs*233|1|0.15|ENSG00000117983|chr11:1244218-1244219|TG/-|frameshift_variant	29.841539824830324	0.7289191502596711	2				NaN	NaN	0	NaN	10363	4193	14554
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14565	38.345	NaN	1904.2	30	0	561.05	0.214				-1	TGMASSLSSL	10	56	498.2377876179151	NaN	0	498.2381591796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))TGMASSLSSL_	ENST00000370659.1_2_6:63921784-63921865:+|nuORF	45.97224482568171	0.33106653400957564	2				NaN	NaN	0	NaN	10367	4196	14564
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14566	38.348	NaN	3390.9	30	0	385.22	0.106				-1	 	0	62	468.7605539900013	935.5065550468026	2	468.7607727050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10368	4196	14564
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14567	38.35	NaN	1576.9	30	0	244.18	0.106	+			1414	AEVVLAHL	8	42	426.2524981847377	850.4904434362754	2	426.2527770996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEVVLAHL_	ENSG00000163902|ENST00000296255|RPN1;ENST00000481168.1_1_3:128363760-128369658:-|nuORF;ENST00000497415.1_1_3:128359957-128369658:-|nuORF	83.28718786952967	0.2977916691876266	2				NaN	NaN	0	NaN	10369	4196	14564
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14568	38.352	NaN	1798.5	30	0	239.31	0.106			+	17961	IGTGGPGAIPL	11	54	476.77646058517035	951.5383682371407	2	476.77606201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IGTGGPGAIPL_	REV__ENST00000467201.5_1_7:100174483-100175156:-|nuORF;REV__ENST00000476881.2_1_7:100174483-100174642:-|nuORF	51.33545320467046	0.40283943988558196	2				NaN	NaN	0	NaN	10370	4196	14564
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14569	38.354	NaN	1809.3	30	0	217.86	0.035	+			29117	NTSLFVLGK	9	54	489.7843653130754	NaN	0	489.7838134765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NTSLFVLGK_	ENSG00000079616|ENST00000160827|KIF22;ENST00000563666.1_1_16:29810259-29810893:+|nuORF;KIF22|p.A402Qfs*34|1|0.14|ENSG00000079616|chr16:29799963-29799964|-/CAAAGAGA|frameshift_variant;KIF22|p.E491Nfs*36|1|0.17|ENSG00000079616|chr16:29803465-29803465|A/-|frameshift_variant;nc|ENSG00000079616|Q14807-2|KIF22	38.753607047826485	0.28190821760017076	2				NaN	NaN	0	NaN	10371	4196	14564
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14580	38.377	NaN	3026.7	30	0	259.22	0.214	+			35687	SDILIHGM	8	53	443.2280404017248	884.4415278702496	2	443.228271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SDILIHGM_	DIS3L|p.L414*|1|0.42|ENSG00000166938|chr15:66320644-66320644|T/-|frameshift_variant;ENSG00000166938|ENST00000319212|DIS3L;ENST00000524795.5_1_15:66587446-66615029:+|nuORF;ENST00000564909.5_1_15:66585934-66618751:+|nuORF;ENST00000565281.5_1_15:66585934-66615040:+|nuORF;nc|ENSG00000166938|Q8TF46-2|DIS3L;nc|ENSG00000166938|Q8TF46-3|DIS3L;nc|ENSG00000166938|Q8TF46-4|DIS3L	114.5961677871614	0.2422812628153066	2				NaN	NaN	0	NaN	10379	4199	14579
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14581	38.381	NaN	2353.3	30	0	326.44	0.106				-1	 	0	57	499.79720795435077	997.5798629755016	2	499.79779052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10380	4199	14579
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14582	38.383	NaN	2334.3	30	0	165.1	0.106	+			50660	YEEEIKVL	8	62	511.77403640138806	1021.5335198695761	2	511.7738037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YEEEIKVL_	ENSG00000140416|ENST00000403994|TPM1;ENST00000558264.5_1_15:63353458-63363368:+|nuORF;ENST00000561242.1_1_15:63353867-63354482:+|nuORF;nc|ENSG00000140416|P09493-10|TPM1;nc|ENSG00000140416|P09493-2|TPM1;nc|ENSG00000140416|P09493-3|TPM1;nc|ENSG00000140416|P09493-4|TPM1;nc|ENSG00000140416|P09493-5|TPM1;nc|ENSG00000140416|P09493-6|TPM1;nc|ENSG00000140416|P09493-7|TPM1;nc|ENSG00000140416|P09493-8|TPM1;nc|ENSG00000140416|P09493-9|TPM1	54.776311868738084	0.5534952410049249	2				NaN	NaN	0	NaN	10381	4199	14579
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14583	38.385	NaN	2015.6	30	0	188.65	0.106				-1	YPNGVCTVY	9	63	536.7419138131776	1071.469274693155	2	536.7430419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_YPNGVC(Carbamidomethyl (C))TVY_	ENSG00000198898|ENST00000361183|CAPZA2;ENST00000464669.1_1_7:116502674-116546397:+|nuORF	35.61828744233558	0.47037581924408073	2				NaN	NaN	0	NaN	10382	4199	14579
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14584	38.386	NaN	2975.4	30	0	1508.9	0.037	+			37945	SPELPKPHLP	10	33	372.2130055477001	1113.6171872433004	3	372.2134094238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SPELPKPHLP_	ENSG00000038532|ENST00000409790|CLEC16A;ENST00000261657.5_1_16:11260358-11272544:+|nuORF;nc|ENSG00000038532|Q2KHT3-3|CLEC16A	17.364965105453717	0.7282106878714807	2				NaN	NaN	0	NaN	10383	4199	14579
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14595	38.412	NaN	3628.8	30	0	467.72	0.214			+	37707	SLSSGLLFR	9	55	490.2818616735578	978.5491704139156	2	490.2823181152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLSSGLLFR_	REV__ENST00000464942.6_1_12:122709207-122709342:-|nuORF	63.30626980617807	0.18605348971131092	2				NaN	NaN	0	NaN	10391	4202	14594
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14596	38.415	NaN	4401.8	30	0	604.3	0.106	+			40551	SVADLAFAH	9	68	465.7375253332132	929.4604977332265	2	465.7373352050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVADLAFAH_	EDC4|p.D801Mfs*15|1|0.26|ENSG00000038358|chr16:67880857-67880857|G/-|frameshift_variant;EDC4|p.Q792Sfs*24|1|0.37|ENSG00000038358|chr16:67880829-67880829|C/-|frameshift_variant;ENSG00000038358|ENST00000358933|EDC4;ENST00000536072.6_1_16:67909906-67914140:+|nuORF;ENST00000572221.5_1_16:67909733-67911757:+|nuORF	65.80317337860623	0.1652391959156183	2				NaN	NaN	0	NaN	10392	4202	14594
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14597	38.417	NaN	3972.1	30	0	1432.3	0.106			+	46954	VKGELKINY	9	67	532.3100463500901	1062.6055397669802	2	532.3107299804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VKGELKINY_	REV__ENSG00000196482|ENST00000408911|ESRRG;REV__nc|ENSG00000196482|P62508-2|ESRRG;REV__nc|ENSG00000196482|P62508-3|ESRRG;REV__nc|ENSG00000196482|P62508-4|ESRRG;REV__nc|ENSG00000196482|P62508-5|ESRRG	111.64827973302667	0.027316110422332632	2				NaN	NaN	0	NaN	10393	4202	14594
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14598	38.419	NaN	2648.1	30	0	346.49	0.106			+	-1	IPKCKCRE	8	63	517.2653884640667	1032.5162239949334	2	517.2659301757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_IPKC(Carbamidomethyl (C))KCRE_	REV__ENSG00000162998|ENST00000295113|FRZB;REV__FRZB|p.S241Kfs*38|1|0.02|ENSG00000162998|chr2:182838485-182838486|-/ATAACTACTTT|frameshift_variant	42.396135135203025	0.6414440140393314	2				NaN	NaN	0	NaN	10394	4202	14594
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14599	38.421	NaN	1830.6	30	0	336.08	0.106	+			36755	SHIHFPLA	8	56	461.25083217197675	920.4871114107535	2	461.25518798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SHIHFPLA_	ENST00000530835.1_1_11:90015825-90016947:+|nuORF	35.200714571348534	0.6875396545722289	2				NaN	NaN	0	NaN	10395	4202	14594
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14600	38.423	NaN	1620.9	30	0	125.29	0.106	+			7852	DQSVVIPNL	9	54	492.7715798257397	NaN	0	492.7708435058594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DQSVVIPNL_	ENSG00000103335|ENST00000301015|PIEZO1;ENST00000484567.5_1_16:88782015-88783673:-|nuORF;PIEZO1|p.A2395Pfs*117|1|0.37|ENSG00000103335|chr16:88716061-88716067|CCCCGCA/-|frameshift_variant	49.44154591367651	0.21054156626303966	2				NaN	NaN	0	NaN	10396	4202	14594
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14601	38.424	NaN	2368	30	0	223.41	0.035				-1	LCSCLPVGI	9	60	509.75493430150607	1017.4953156698122	2	509.7542419433594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C)	_LC(Carbamidomethyl (C))SC(Carbamidomethyl (C))LPVGI_	TNS2|p.K660Nfs*96|1|0.2|ENSG00000111077|chr12:53059615-53059615|G/-|frameshift_variant	33.51558372728122	0.4900267029546261	2				NaN	NaN	0	NaN	10397	4202	14594
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14612	38.449	NaN	4906	30	0	961.47	0.214				-1	 	0	72	471.2864649223335	940.558376911467	2	471.2864685058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10405	4205	14611
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14613	38.453	NaN	3213.5	30	0	395.42	0.106	+			6117	AVNSIFLSH	9	64	494.266156791664	NaN	0	494.2662353515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVNSIFLSH_	ENSG00000123146|ENST00000242786|ADGRE5;nc|ENSG00000123146|P48960-2|ADGRE5;nc|ENSG00000123146|P48960-3|ADGRE5	71.87747018426188	0.0992163553043454	2				NaN	NaN	0	NaN	10406	4205	14611
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14614	38.455	NaN	3039.4	30	0	305.25	0.106	+			28344	NEIVKIQSL	9	63	522.3075811428341	1042.6006093524682	2	522.3087158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NEIVKIQSL_	ENSG00000145703|ENST00000274364|IQGAP2;IQGAP2|p.Q1499Rfs*15|1|0.05|ENSG00000145703|chr5:76701201-76701202|-/CCGAG|frameshift_variant;IQGAP2|p.T881Hfs*2|2|0.3|ENSG00000145703|chr5:76665133-76665133|A/-|frameshift_variant;nc|ENSG00000145703|Q13576-2|IQGAP2;nc|ENSG00000145703|Q13576-3|IQGAP2	85.86182877749512	0.07653218437724067	2				NaN	NaN	0	NaN	10407	4205	14611
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14615	38.457	NaN	3150.6	30	0	766.98	0.106				-1	 	0	48	372.7171660388276	743.4197791444552	2	372.7173156738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10408	4205	14611
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14616	38.458	NaN	1972.3	30	0	202.9	0.106				-1	 	0	67	503.2897009475886	502.2824244809886	1	503.2854309082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10409	4205	14611
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14617	38.46	NaN	1325	30	0	109.06	0.034	+			1346	AETVLNQM	8	49	453.2232495917412	NaN	0	453.22320556640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AETVLNQM_	ENSG00000214753|ENST00000301785|HNRNPUL2	42.396135135203025	1.7418937515398478	2				NaN	NaN	0	NaN	10410	4205	14611
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14626	38.482	NaN	8005.6	30	0	1571.7	0.214				-1	 	0	62	498.2734172742184	994.5322816152368	2	498.2733154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10416	4208	14625
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14627	38.485	NaN	4613.6	30	0	738.8	0.106	+			10142	ESRVISQPD	9	62	515.7614827258542	1029.5084125185083	2	516.2640380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ESRVISQPD_	ENSG00000123505|ENST00000368885|AMD1;nc|ENSG00000123505|P17707-2|AMD1	77.31757898189308	0.1091473830098891	2				NaN	NaN	0	NaN	10417	4208	14625
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14628	38.487	NaN	2404.2	30	0	285.42	0.106			+	26585	LTTYGLGAL	9	53	454.75746166086316	907.5003703885263	2	454.75836181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LTTYGLGAL_	REV__TSKU|p.P81L|1|0.06|ENSG00000182704|chr11:76795858-76795858|C/T|missense_variant	60.29395666154354	0.21116425950210296	2				NaN	NaN	0	NaN	10418	4208	14625
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14629	38.489	NaN	1712.4	30	0	182.41	0.038			+	32181	QSSLLTEVLES	11	40	402.5462465283768	NaN	0	402.21282958984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QSSLLTEVLES_	REV__ENSG00000132953|ENST00000255305|XPO4	41.080066990542036	0.3793850210388171	2				NaN	NaN	0	NaN	10419	4208	14625
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14639	38.512	NaN	6947	30	0	1325.9	0.214	+			17501	IDFTGHAL	8	56	437.22654375164024	872.4385345700805	2	437.22686767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IDFTGHAL_	ENSG00000057608|ENST00000380191|GDI2;ENSG00000203879|ENST00000447750|GDI1;ENST00000491154.1_1_X:153666748-153668487:+|nuORF;GDI2|p.S222Afs*20|1|0.1|ENSG00000057608|chr10:5785197-5785197|T/-|frameshift_variant;nc|ENSG00000057608|P50395-2|GDI2	101.21157088398209	0.2500103534009131	2				NaN	NaN	0	NaN	10426	4211	14638
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14640	38.516	NaN	4829.7	30	0	746.96	0.106				-1	 	0	63	555.7960375791009	1109.5775222250018	2	555.7981567382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10427	4211	14638
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14641	38.518	NaN	8413.3	30	0	1637.9	0.106	+			19074	IYIAGHPAF	9	67	494.7655960559098	987.5166391786196	2	494.7655029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IYIAGHPAF_	ENSG00000104824|ENST00000221419|HNRNPL;ENST00000568980.1_1_15:34781792-34782686:-|nuORF;HNRNPL|p.P337Hfs*58|9|0.35|ENSG00000104824|chr19:38840319-38840319|G/-|frameshift_variant;HNRNPL|p.P338Tfs*56|1|0.23|ENSG00000104824|chr19:38840318-38840319|-/G|frameshift_variant;nc|ENSG00000104824|P14866-2|HNRNPL	100.36016987692139	0.038834373944719155	2				NaN	NaN	0	NaN	10428	4211	14638
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14642	38.519	NaN	18363	30	0	2799.6	0.106				-1	 	0	79	460.2489316864083	918.4833104396166	2	460.24920654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10429	4211	14638
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14643	38.521	NaN	2993.5	30	0	357.15	0.106	+			7242	DALLNWLK	8	64	486.7803806088632	971.5462082845264	2	486.7811584472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DALLNWLK_	ENSG00000051382|ENST00000674063|PIK3CB;ENSG00000171608|ENST00000377346|PIK3CD;ENST00000481749.5_1_3:138374233-138426144:-|nuORF;PIK3CB|p.T930Lfs*62|1|0.47|ENSG00000051382|chr3:138663914-138663914|T/-|frameshift_variant	66.42927471994793	0.4381325844043345	2				NaN	NaN	0	NaN	10430	4211	14638
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14644	38.523	NaN	2140.2	30	0	471.2	0.036				-1	 	0	60	537.2682438512837	1072.5219347693674	2	537.2694091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10431	4211	14638
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14645	38.524	NaN	1597.6	30	0	166.09	0.14			+	16700	HKRARNTK	8	61	505.8027648925781	NaN	0	505.8027648925781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HKRARNTK_	REV__ENSG00000182379|ENST00000349394|NXPH4;REV__ENST00000556415.1_1_12:57615249-57619527:+|nuORF	30.503639358989545	1.7418937515398478	2				NaN	NaN	0	NaN	10432	4211	14638
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14654	38.547	NaN	4528.2	30	0	1412.1	0.214				-1	 	0	63	488.75959299061947	975.504633048039	2	488.7598876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10438	4214	14653
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14655	38.551	NaN	1379.3	30	0	243.09	0.106				-1	CWGLLGPFS	9	58	518.751442754996	1035.488332576792	2	518.751708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_C(Carbamidomethyl (C))WGLLGPFS_	ENST00000483944.5_1_3:124810369-124811009:-|nuORF	35.200714571348534	0.47427825964483533	2				NaN	NaN	0	NaN	10439	4214	14653
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14656	38.552	NaN	2416.5	30	0	1462.4	0.047				-1	 	0	38	610.97885284329	1829.91472913007	3	610.97900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10440	4214	14653
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14664	38.572	NaN	4042.2	30	0	1178.2	0.214	+			11577	FPNAIEHTL	9	64	521.2714929742442	1040.5284330152883	2	521.2721557617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FPNAIEHTL_	ENSG00000130985|ENST00000335972|UBA1;ENST00000490869.1_1_X:47063082-47065999:+|nuORF;nc|ENSG00000130985|P22314-2|UBA1	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	10445	4217	14663
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14665	38.576	NaN	2534.4	30	0	280.35	0.106	+			17188	HTSIMSYLN	9	58	533.2545925500627	1064.4946321669254	2	533.2554321289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HTSIMSYLN_	ENSG00000175455|ENST00000409697|CCDC14;nc|ENSG00000175455|Q49A88-2|CCDC14;nc|ENSG00000175455|Q49A88-3|CCDC14;nc|ENSG00000175455|Q49A88-5|CCDC14;nc|ENSG00000175455|Q49A88-6|CCDC14;nc|ENSG00000175455|Q49A88|CCDC14	26.69291269510374	0.5537881896960711	2				NaN	NaN	0	NaN	10446	4217	14663
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14666	38.578	NaN	2285.2	30	0	159.68	0.106	+			46338	VEKLGAYEL	9	69	511.281044860018	1020.5475367868361	2	511.28192138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VEKLGAYEL_	ARID5A|p.R213Gfs*55|1|0.21|ENSG00000196843|chr2:96551159-96551159|C/-|frameshift_variant;ENSG00000196843|ENST00000357485|ARID5A;ENST00000467498.5_1_2:97215494-97216349:+|nuORF;nc|ENSG00000196843|Q03989-5|ARID5A	47.95952297671804	0.32689736945648856	2				NaN	NaN	0	NaN	10447	4217	14663
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14667	38.58	NaN	2208.7	30	0	180.15	0.106			+	-1	LSHAQGCVAC	10	71	523.2326295952262	1044.4507062572522	2	523.2333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_LSHAQGC(Carbamidomethyl (C))VAC_	REV__ENSG00000072201|ENST00000263925|LNX1;REV__LNX1|p.I224*|2|0.26|ENSG00000072201|chr4:53507422-53507422|T/-|frameshift_variant	37.15910966729921	0.575322462179216	2				NaN	NaN	0	NaN	10448	4217	14663
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14668	38.581	NaN	1393.9	30	0	166.01	0.036	+			11576	FPMVYCILL	9	64	549.7881501185352	1097.5617473038703	2	549.7901000976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FPMVYCILL_	ENSG00000177669|ENST00000320542|MBOAT4;nc|ENSG00000177669|Q96T53-2|MBOAT4	49.21078951299608	0.3122205139198386	2				NaN	NaN	0	NaN	10449	4217	14663
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14677	38.603	NaN	3555.9	30	0	525.22	0.214			+	-1	GVSSVRLHR	9	65	526.8024516642846	1051.5903503953691	2	526.8036499023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))GVSSVRLHR_	REV__ENST00000577539.1_1_18:9950385-9950580:+|nuORF	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	10455	4220	14676
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14678	38.606	NaN	1759	30	0	180.86	0.037	+			18452	ISEENFRVM	9	62	562.7733030842136	1123.532053235227	2	562.7745361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ISEENFRVM_	ENSG00000138160|ENST00000260731|KIF11;KIF11|p.K673Rfs*3|1|0.12|ENSG00000138160|chr10:92637397-92637397|A/-|frameshift_variant	120.8684288430529	0.02067403653475984	2				NaN	NaN	0	NaN	10456	4220	14676
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14684	38.622	NaN	6010.9	30	0	732.64	0.214			+	27256	MESLQPAAEV	10	76	537.7607478631783	1073.5069427931564	2	537.7618408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MESLQPAAEV_	REV__ENSG00000204104|ENST00000373327|TRAF3IP1;REV__nc|ENSG00000204104|Q8TDR0-2|TRAF3IP1	58.22992032128504	0.38193887838457763	2				NaN	NaN	0	NaN	10459	4223	14683
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14685	38.626	NaN	1513	30	0	95.629	0.106				-1	 	0	62	485.7995309323329	969.5845089314658	2	485.799560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10460	4223	14683
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14686	38.628	NaN	802.37	30	0	78.26	0.033			+	1116	AELLHALA	8	41	419.244873046875	NaN	0	419.244873046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AELLHALA_	REV__ENSG00000102109|ENST00000218230|PCSK1N	29.841539824830324	1.7418937515398478	2				NaN	NaN	0	NaN	10461	4223	14683
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14690	38.641	NaN	1701.6	30	0	138.48	0.214	+			6870	CLEKLGNLQ	9	62	509.27413169035975	1016.5337104475195	2	509.27703857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CLEKLGNLQ_	CD180|p.A649Cfs*3|1|0.26|ENSG00000134061|chr5:67182898-67182899|-/A|frameshift_variant;ENSG00000134061|ENST00000256447|CD180	40.77816245573522	0.41113185337114944	2				NaN	NaN	0	NaN	10462	4226	14689
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14691	38.644	NaN	1051.8	30	0	85.898	0.037				-1	RLCFPHGPCP	10	42	592.2805246631234	NaN	0	592.279296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_RLC(Carbamidomethyl (C))FPHGPCP_	ENST00000513443.5_1_5:81268034-81268226:+|nuORF	24.20275056022122	0.4201028297492154	2				NaN	NaN	0	NaN	10463	4226	14689
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14695	38.658	NaN	1635.5	30	0	147.21	0.142			+	-1	NEPMLSMK	8	60	483.22470671083585	964.4348604884717	2	483.2250061035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_NEPM(Oxidation (M))LSMK_	REV__ENST00000315286.12_1_17:42756285-42757961:-|nuORF	38.80614096846853	0.6637206697844082	2				NaN	NaN	0	NaN	10464	4229	14694
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14702	38.677	NaN	3413.4	30	0	761.64	0.214				-1	KAKRWMAL	8	71	510.29380520944903	1018.5730574856981	2	510.2943115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_KAKRWM(Oxidation (M))AL_	ENSG00000168427|ENST00000409223|KLHL30	40.5726180659479	0.6527593143185008	2				NaN	NaN	0	NaN	10468	4232	14701
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14703	38.681	NaN	1635.9	30	0	340.09	0.106	+			27368	MKAVLIGM	8	39	431.74725341796875	NaN	0	431.74725341796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MKAVLIGM_	ENSG00000166173|ENST00000299213|LARP6	28.2542754592877	1.7418937515398478	2				NaN	NaN	0	NaN	10469	4232	14701
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14704	38.683	NaN	2490.7	30	0	442.49	0.032			+	28908	NQQGVVAI	8	52	414.73193359375	NaN	0	414.73193359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NQQGVVAI_	REV__ENSG00000181222|ENST00000674977|POLR2A;REV__nc|ENSG00000181222|P24928|POLR2A	52.29916861842294	1.7418937515398478	2				NaN	NaN	0	NaN	10470	4232	14701
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14709	38.696	NaN	2729.5	30	0	207.19	0.214	+			27710	MQFFNYVM	8	70	556.232679579352	1110.4508062255038	2	556.2339477539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_M(Oxidation (M))QFFNYVM(Oxidation (M))_	ENSG00000092020|ENST00000261475|PPP2R3C;nc|ENSG00000092020|Q969Q6-2|PPP2R3C	68.484700416344	0.4195245774506064	2				NaN	NaN	0	NaN	10472	4235	14708
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14710	38.7	NaN	3834.7	30	0	231.89	0.106			+	23040	KVTAAYLVGGA	11	73	525.3012855948333	1048.5880182564665	2	525.8046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVTAAYLVGGA_	REV__ENSG00000135622|ENST00000357877|SEMA4F	36.446750945000026	0.6065623449959539	2				NaN	NaN	0	NaN	10473	4235	14708
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14711	38.702	NaN	3660	30	0	1102.5	0.106				-1	 	0	61	463.7157366685155	925.416920403831	2	463.7159423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10474	4235	14708
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14712	38.704	NaN	2748.3	30	0	340.76	0.106			+	9514	EKWDIPKKG	9	63	550.8082613367902	1099.6019697403804	2	550.8096923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EKWDIPKKG_	REV__ENSG00000076248|ENST00000242576|UNG;REV__nc|ENSG00000076248|P13051-2|UNG	80.45461616416974	0.09558281504443908	2				NaN	NaN	0	NaN	10475	4235	14708
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14713	38.705	NaN	2870.7	30	0	450.2	0.106	+			46853	VIHNDTVL	8	56	455.7527336795952	909.4909144259905	2	455.7530212402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VIHNDTVL_	ENSG00000215906|ENST00000426928|LACTBL1;nc|ENSG00000215906|A8MY62|LACTBL1	40.5726180659479	0.6527593143185008	2				NaN	NaN	0	NaN	10476	4235	14708
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14714	38.707	NaN	1374	30	0	104.56	0.037	+			28869	NPYSGDLTKF	10	62	571.2794236620093	1140.5442943908185	2	571.2796630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NPYSGDLTKF_	ENSG00000143569|ENST00000428931|UBAP2L;nc|ENSG00000143569|Q14157-1|UBAP2L;nc|ENSG00000143569|Q14157-3|UBAP2L;nc|ENSG00000143569|Q14157-4|UBAP2L;nc|ENSG00000143569|Q14157-5|UBAP2L	81.52500206392136	0.18316182710238588	2				NaN	NaN	0	NaN	10477	4235	14708
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14720	38.723	NaN	6149.7	30	0	746.36	0.214				-1	 	0	66	499.79720795435077	997.5798629755016	2	499.79754638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10480	4238	14719
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14721	38.726	NaN	3474.6	30	0	306.11	0.106			+	23393	LAAFLTAGLA	10	71	474.2802064819808	946.5458600307617	2	474.28118896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LAAFLTAGLA_	REV__nc|ENSG00000173349|Q587I9|SFT2D3	60.97194046774394	0.3570005369683776	2				NaN	NaN	0	NaN	10481	4238	14719
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14722	38.728	NaN	1707.1	30	0	156.06	0.106	+			42496	TANSIMASY	9	55	479.22055761702694	956.4265623008539	2	479.22076416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TANSIMASY_	ENSG00000070061|ENST00000374647|ELP1	67.49366992349736	0.1516260258713357	2				NaN	NaN	0	NaN	10482	4238	14719
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14723	38.73	NaN	2755.4	30	0	899.39	0.106				-1	 	0	55	596.3211740446226	1190.627795156045	2	596.3216552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10483	4238	14719
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14724	38.732	NaN	1142.4	30	0	205.73	0.036	+			9780	ENQLLERR	8	57	529.2932317941164	NaN	0	529.294189453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ENQLLERR_	ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC;PRKDC|p.D2437Wfs*3|1|0.11|ENSG00000253729|chr8:47840161-47840162|-/CA|frameshift_variant;PRKDC|p.K3681Nfs*6|1|0.32|ENSG00000253729|chr8:47785174-47785177|TTCT/-|frameshift_variant;PRKDC|p.M3670*|1|0.5|ENSG00000253729|chr8:47785212-47785212|T/-|frameshift_variant;PRKDC|p.M3846Cfs*12|1|0.13|ENSG00000253729|chr8:47779047-47779047|T/-|frameshift_variant;PRKDC|p.M4020Cfs*2|1|0.31|ENSG00000253729|chr8:47776968-47776968|T/-|frameshift_variant;PRKDC|p.N3605Kfs*3|1|0.22|ENSG00000253729|chr8:47788993-47788994|-/T|frameshift_variant;PRKDC|p.N4037Ifs*15|1|0.17|ENSG00000253729|chr8:47776916-47776916|T/-|frameshift_variant;PRKDC|p.R2704Gfs*13|2|0.34|ENSG00000253729|chr8:47834238-47834238|T/-|frameshift_variant;PRKDC|p.S3402Ifs*16|1|0.04|ENSG00000253729|chr8:47799302-47799303|-/AAACCGTGAGTTAGAGGAGGTAA|frameshift_variant;PRKDC|p.S4099Qfs*6|1|0.25|ENSG00000253729|chr8:47774265-47774265|A/-|frameshift_variant;PRKDC|p.T3268Pfs*7|1|0.5|ENSG00000253729|chr8:47803426-47803426|T/-|frameshift_variant;PRKDC|p.W3401Cfs*4|1|0.01|ENSG00000253729|chr8:47799304-47799305|-/AATGAATA|frameshift_variant	60.97194046774394	1.7418937515398478	2				NaN	NaN	0	NaN	10484	4238	14719
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14731	38.749	NaN	4433.4	30	0	632.58	0.214	+			44521	TSVGYAIFK	9	65	493.2705916992268	984.5266304652537	2	493.2711486816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSVGYAIFK_	ENSG00000055044|ENST00000264279|NOP58;ENST00000467734.5_1_2:203130664-203142690:+|nuORF;ENST00000472050.5_1_2:203130664-203149064:+|nuORF;ENST00000488403.5_1_2:203130664-203149205:+|nuORF;ENST00000492740.5_1_2:203130664-203139913:+|nuORF	90.36981228632155	0.0638227155548745	2				NaN	NaN	0	NaN	10488	4241	14730
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14732	38.753	NaN	7874.7	30	0	1636.4	0.034				-1	 	0	62	457.27642906765413	912.5383052021083	2	457.27685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10489	4241	14730
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14739	38.771	NaN	2795.9	30	0	531.51	0.214			+	29377	PALGAPAAGDL	11	63	476.75808910117144	951.5016252691429	2	476.7583923339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PALGAPAAGDL_	REV__ENST00000006053.6_2_16:57418248-57418452:+|nuORF	49.44154591367651	0.42875387410569	2				NaN	NaN	0	NaN	10493	4244	14738
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14740	38.774	NaN	2724.1	30	0	452.5	0.106	+			39391	STDNLAFLK	9	62	504.7718750459618	NaN	0	504.7720031738281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STDNLAFLK_	ENSG00000182957|ENST00000382108|SPATA13;ENST00000466831.2_1_13:24796959-24798912:+|nuORF	71.87747018426188	0.0992163553043454	2				NaN	NaN	0	NaN	10494	4244	14738
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14741	38.776	NaN	2597.7	30	0	399.04	0.106	+			15336	GTVKAASGFNA	11	71	511.76660724806027	1021.5186615629206	2	513.2699584960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTVKAASGFNA_	ENSG00000196975|ENST00000394295|ANXA4;nc|ENSG00000196975|P09525|ANXA4	29.170058357718403	0.683821074385409	2				NaN	NaN	0	NaN	10495	4244	14738
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14742	38.778	NaN	879.35	30	0	113.35	0.106	+			35721	SDLPVKVI	8	38	435.7682668480341	NaN	0	435.7684631347656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SDLPVKVI_	ENSG00000127616|ENST00000344626|SMARCA4;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;nc|ENSG00000127616|P51532-5|SMARCA4;SMARCA4|p.G1136Afs*4|1|0.27|ENSG00000127616|chr19:11030751-11030751|G/-|frameshift_variant;SMARCA4|p.P1453Lfs*10|1|0.31|ENSG00000127616|chr19:11041491-11041491|C/-|frameshift_variant;SMARCA4|p.S828Lfs*117|1|0.15|ENSG00000127616|chr19:11018994-11018995|-/C|frameshift_variant	55.50420428727701	1.7418937515398478	2				NaN	NaN	0	NaN	10496	4244	14738
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14743	38.78	NaN	2726.5	30	0	504.06	0.106	+			23923	LDMSEARS	8	56	454.7109433653056	NaN	0	454.71044921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LDMSEARS_	ENSG00000005513|ENST00000293894|SOX8	55.50420428727701	1.7418937515398478	2				NaN	NaN	0	NaN	10497	4244	14738
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14744	38.782	NaN	1570	30	0	158.94	0.035				-1	LPMMRNQM	8	59	518.7429969518339	NaN	0	518.7424926757812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_LPMM(Oxidation (M))RNQM_	ENSG00000069535|ENST00000378069|MAOB;nc|ENSG00000069535|P27338-2|MAOB	44.53106598305862	1.7418937515398478	2				NaN	NaN	0	NaN	10498	4244	14738
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14754	38.803	NaN	15435	30	0	4661.2	0.214				-1	 	0	70	471.2864649223335	940.558376911467	2	471.2867126464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10505	4247	14753
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14755	38.807	NaN	3718.6	30	0	644.23	0.106	+			29007	NSPDIHIVQ	9	71	511.76660724806027	1021.5186615629206	2	511.7667541503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NSPDIHIVQ_	ENSG00000138347|ENST00000358913|MYPN;MYPN|p.I891*|1|0.12|ENSG00000138347|chr10:68175423-68175423|A/-|frameshift_variant;MYPN|p.K575Nfs*9|1|0.23|ENSG00000138347|chr10:68166410-68166410|C/-|frameshift_variant;nc|ENSG00000138347|Q86TC9-2|MYPN	56.72105179125745	0.24094814563026265	2				NaN	NaN	0	NaN	10506	4247	14753
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14756	38.809	NaN	2511.9	30	0	516.72	0.106			+	8428	EAQSSLIGK	9	55	466.75556862324106	931.4965843132821	2	466.7556457519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EAQSSLIGK_	REV__ENSG00000181090|ENST00000460843|EHMT1;REV__ENST00000371394.6_1_9:140611085-140686569:+|nuORF;REV__nc|ENSG00000181090|Q9H9B1-3|EHMT1;REV__nc|ENSG00000181090|Q9H9B1-4|EHMT1	82.7504851949679	0.08565546331141553	2				NaN	NaN	0	NaN	10507	4247	14753
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14757	38.811	NaN	1621.5	30	0	491.78	0.106			+	36569	SFSHRLLVA	9	60	515.294463723738	1028.5743745142759	2	515.2949829101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SFSHRLLVA_	REV__ENSG00000198838|ENST00000634891|RYR3;REV__nc|ENSG00000198838|Q15413-2|RYR3;REV__nc|ENSG00000198838|Q15413-3|RYR3;REV__RYR3|p.E2211Qfs*84|1|0.14|ENSG00000198838|chr15:33722725-33722726|-/CA|frameshift_variant;REV__RYR3|p.E3943Rfs*18|1|0.12|ENSG00000198838|chr15:33837800-33837801|-/A|frameshift_variant;REV__RYR3|p.F766Lfs*13|1|0.12|ENSG00000198838|chr15:33613314-33613314|T/-|frameshift_variant;REV__RYR3|p.G2237Efs*57|1|0.42|ENSG00000198838|chr15:33722800-33722800|G/-|frameshift_variant;REV__RYR3|p.N4580Mfs*8|1|0.37|ENSG00000198838|chr15:33853618-33853618|A/-|frameshift_variant	29.14955571784316	0.5308295550522326	2				NaN	NaN	0	NaN	10508	4247	14753
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14758	38.812	NaN	1341.7	30	0	220.13	0.034			+	7593	DISDKGVIL	9	55	480.2736130194834	NaN	0	480.2732849121094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DISDKGVIL_	REV__ENSG00000110066|ENST00000304363|KMT5B;REV__ENST00000441488.6_1_11:67925157-67938746:-|nuORF	56.72105179125745	0.16330365735109603	2				NaN	NaN	0	NaN	10509	4247	14753
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14777	38.861	NaN	4915.4	30	0	1833.1	0.214	+			32089	QSFFTITQK	9	68	550.2926410989231	1098.5707292646462	2	550.2930908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QSFFTITQK_	ENSG00000177084|ENST00000320574|POLE;ENST00000534922.5_1_12:133202008-133209092:-|nuORF;ENST00000537064.5_1_12:133201285-133234573:-|nuORF	45.02220120713402	0.3613509778819777	2				NaN	NaN	0	NaN	10522	4253	14776
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14778	38.864	NaN	2564.6	30	0	294.18	0.106			+	-1	SISLVRMI	8	63	480.7804215781491	959.5462902230983	2	480.7809753417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SISLVRMI_	REV__ENSG00000143627|ENST00000342741|PKLR;REV__nc|ENSG00000143627|P30613-2|PKLR	50.0245360154114	0.5941082100236891	2				NaN	NaN	0	NaN	10523	4253	14776
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14779	38.866	NaN	1264.5	30	0	109.78	0.034				-1	 	0	54	460.2489316864083	918.4833104396166	2	460.25006103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10524	4253	14776
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14786	38.884	NaN	4143.5	30	0	962.32	0.214			+	37238	SKSIEGGAPPM	11	59	537.2682438512837	1072.5219347693674	2	537.2694702148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SKSIEGGAPPM_	REV__ENSG00000164199|ENST00000405460|ADGRV1;REV__nc|ENSG00000164199|Q8WXG9-2|ADGRV1	30.317721548370564	0.6717830234747728	2				NaN	NaN	0	NaN	10528	4256	14785
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14787	38.888	NaN	1843.3	30	0	412.76	0.106	+			47484	VQDIFTYAK	9	68	542.7870040994918	1083.5594552657835	2	542.7879638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VQDIFTYAK_	ENSG00000155465|ENST00000674313|SLC7A7	63.42647028704847	0.1850514934184437	2				NaN	NaN	0	NaN	10529	4256	14785
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14788	38.889	NaN	5702.9	30	0	652.99	0.106	+			44060	TPSKGVLFY	9	70	506.2789384095042	1010.5433238858084	2	506.279541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TPSKGVLFY_	ENSG00000165280|ENST00000358901|VCP;ENST00000493886.5_1_9:35057116-35062147:-|nuORF	74.25504064058377	0.12238981753128622	2				NaN	NaN	0	NaN	10530	4256	14785
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14789	38.891	NaN	2137.1	30	0	755.69	0.106			+	9371	EKAIVYIQT	9	57	532.8022952453578	1063.5900375575154	2	532.8029174804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EKAIVYIQT_	REV__nc|ENSG00000163599|P16410-5|CTLA4	36.446750945000026	0.4619375763483977	2				NaN	NaN	0	NaN	10531	4256	14785
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14790	38.893	NaN	2766.8	30	0	461.01	0.034	+			13715	GPVGVNVTY	9	49	453.2392952308135	904.4640375284271	2	453.2394104003906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GPVGVNVTY_	ENSG00000196924|ENST00000369850|FLNA;FLNA|p.A1026Lfs*20|1|0.42|ENSG00000196924|chrX:154361439-154361439|C/-|frameshift_variant;FLNA|p.G2237Efs*109|1|0.28|ENSG00000196924|chrX:154352240-154352240|C/-|frameshift_variant;FLNA|p.Q1716Sfs*23|2|0.38|ENSG00000196924|chrX:154354896-154354896|G/-|frameshift_variant;FLNA|p.R2520Vfs*16|1|0.7|ENSG00000196924|chrX:154349560-154349560|G/-|frameshift_variant;nc|ENSG00000196924|P21333-2|FLNA	40.77816245573522	0.41113185337114944	2				NaN	NaN	0	NaN	10532	4256	14785
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14799	38.915	NaN	1695.9	30	0	342.27	0.214	+			13432	GLGVGTSLL	9	48	408.74619103208175	NaN	0	408.7462158203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GLGVGTSLL_	ENSG00000164050|ENST00000296440|PLXNB1;ENST00000473996.1_1_3:48454981-48455344:-|nuORF;ENST00000485535.5_1_3:48454981-48455414:-|nuORF;nc|ENSG00000164050|O43157-2|PLXNB1	40.5726180659479	0.27166212580479165	2				NaN	NaN	0	NaN	10538	4259	14798
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14800	38.918	NaN	2558	30	0	398.77	0.035	+			41899	SVVAVLVYK	9	68	489.30477959861327	976.5950062640266	2	489.30535888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVVAVLVYK_	ENSG00000136869|ENST00000355622|TLR4;nc|ENSG00000136869|O00206-2|TLR4;nc|ENSG00000136869|O00206-3|TLR4	71.87747018426188	0.13267044672804276	2				NaN	NaN	0	NaN	10539	4259	14798
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14808	38.938	NaN	2785.7	30	0	962.47	0.214			+	48190	VTAIIQIK	8	54	443.291732062209	884.568911191218	2	443.2920837402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTAIIQIK_	REV__TMC1|p.R100I|2|0.28|ENSG00000165091|chr9:72700580-72700580|G/T|missense_variant	47.91560031466742	0.6071945918984287	2				NaN	NaN	0	NaN	10544	4262	14807
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14809	38.942	NaN	1662.3	30	0	284.88	0.106	+			11705	FRTPTADLN	9	59	517.7677989637486	NaN	0	517.7672119140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FRTPTADLN_	tr|U7SQS7|U7SQS7_FUSNUATPsynthasesubunitaOS=FusobacteriumnucleatumCTI-5OX=1316586GN=atpBPE=3SV=1	29.170058357718403	0.3302935627494407	2				NaN	NaN	0	NaN	10545	4262	14807
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14810	38.944	NaN	1787.6	30	0	219.9	0.035	+			28529	NIIDVLIKN	9	63	521.3187203331903	NaN	0	521.2919311523438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NIIDVLIKN_	tr|U7SJR6|U7SJR6_FUSNUTwo-componentsystem,OmpRfamily,responseregulatorOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02066PE=4SV=1	36.446750945000026	0.29355505452396785	2				NaN	NaN	0	NaN	10546	4262	14807
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14819	38.964	NaN	5442	30	0	1374.5	0.215	+			3093	ASGGIFVLK	9	59	446.2680984216204	890.5216439100408	2	446.2686462402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASGGIFVLK_	ENSG00000030066|ENST00000378460|NUP160;ENST00000526870.1_3_11:47861380-47861614:-|nuORF;nc|ENSG00000030066|Q12769|NUP160	107.00750918261382	0.032051501805654005	2				NaN	NaN	0	NaN	10552	4265	14818
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14820	38.967	NaN	4633.4	30	0	2055	0.106			+	23962	LDSVKFPVG	9	60	481.2711705496513	960.5277881661026	2	481.27142333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LDSVKFPVG_	REV__ENSG00000158062|ENST00000374222|UBXN11;REV__nc|ENSG00000158062|Q5T124-2|UBXN11;REV__nc|ENSG00000158062|Q5T124-3|UBXN11;REV__nc|ENSG00000158062|Q5T124-4|UBXN11;REV__nc|ENSG00000158062|Q5T124-8|UBXN11	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	10553	4265	14818
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14821	38.969	NaN	2708.9	30	0	762.74	0.106	+			40337	STTENFFLK	9	61	543.7766296163187	1085.5387062994373	2	543.777587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STTENFFLK_	ENSG00000011454|ENST00000373647|RABGAP1;nc|ENSG00000188394|Q9Y3P9-2|RABGAP1;nc|ENSG00000188394|Q9Y3P9-3|RABGAP1	67.49366992349736	0.1516260258713357	2				NaN	NaN	0	NaN	10554	4265	14818
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14822	38.971	NaN	1765.5	30	0	435.71	0.106	+			35179	SAIIAKPG	8	39	378.7353813838684	755.4562098345368	2	378.7359924316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SAIIAKPG_	ENSG00000135931|ENST00000611582|ARMC9	26.79610172149135	0.7524337208463756	2				NaN	NaN	0	NaN	10555	4265	14818
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14823	38.973	NaN	2182.1	30	0	180.39	0.106			+	6347	AVTRSRAKK	9	68	508.82142522336164	NaN	0	508.82135009765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVTRSRAKK_	REV__ENST00000550373.2_1_12:53937026-53937696:-|nuORF;REV__nc|ENSG00000170653|P17544-1|ATF7;REV__nc|ENSG00000170653|P17544-3|ATF7;REV__nc|ENSG00000170653|P17544-5|ATF7	66.96192283764107	0.11962625698446946	2				NaN	NaN	0	NaN	10556	4265	14818
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14824	38.974	NaN	1549.3	30	0	108.25	0.035	+			1260	AESAPAWRL	9	54	500.76401559000203	999.5134782468041	2	500.7644958496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AESAPAWRL_	ENSG00000071994|ENST00000541970|PDCD2;ENST00000544336.5_2_6:170892694-170893702:-|nuORF;nc|ENSG00000071994|Q16342-2|PDCD2;nc|ENSG00000071994|Q16342-3|PDCD2;nc|ENSG00000071994|Q16342-4|PDCD2;nc|ENSG00000071994|Q16342-5|PDCD2	39.252832667884924	0.4290233611298554	2				NaN	NaN	0	NaN	10557	4265	14818
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14825	38.975	NaN	1503.1	30	0	240.67	0.14			+	19378	KALSMSDILA	10	64	524.7884115113071	1047.5622700894141	2	524.7885131835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KALSMSDILA_	REV__ENSG00000079246|ENST00000392132|XRCC5;REV__XRCC5|p.Q488Rfs*29|1|0.06|ENSG00000079246|chr2:216141305-216141305|C/-|frameshift_variant	27.882242232435846	0.6521336255503853	2				NaN	NaN	0	NaN	10558	4265	14818
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14833	38.997	NaN	6830.9	30	0	1130.1	0.214				-1	 	0	62	491.2837951985475	980.5530374638951	2	491.2848815917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10563	4268	14832
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14834	39	NaN	3906	30	0	447.72	0.035			+	47044	VLFAAQEEM	9	62	519.2515432111876	1036.488533489175	2	519.2535400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VLFAAQEEM_	REV__AOC3|p.R585Sfs*60|1|0.28|ENSG00000131471|chr17:42854594-42854595|-/C|frameshift_variant;REV__AOC3|p.T657Lfs*22|1|0.15|ENSG00000131471|chr17:42855521-42855521|C/-|frameshift_variant;REV__ENSG00000131471|ENST00000308423|AOC3;REV__nc|ENSG00000131471|Q16853-2|AOC3;REV__nc|ENSG00000131471|Q16853-3|AOC3	97.47269410471826	0.04379738608259218	2				NaN	NaN	0	NaN	10564	4268	14832
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14845	39.025	NaN	7089.4	30	0	1334.8	0.214	+			11985	FVQGIFVEK	9	69	533.7997620684434	1065.5849712036868	2	533.8006591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FVQGIFVEK_	ENSG00000116473|ENST00000369709|RAP1A;ENSG00000127314|ENST00000250559|RAP1B;ENST00000460800.5_1_12:69042504-69044290:+|nuORF;ENST00000494982.1_1_1:112233982-112249293:+|nuORF;nc|ENSG00000127314|P61224-2|RAP1B;nc|ENSG00000127314|P61224-3|RAP1B;nc|ENSG00000254893|A6NIZ1|RAP1BL	85.86182877749512	0.07653218437724067	2				NaN	NaN	0	NaN	10572	4271	14844
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14846	39.029	NaN	3018.6	30	0	890.2	0.106			+	33781	RQARTASIK	9	58	515.8102422658935	1029.605931598587	2	515.8103637695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RQARTASIK_	REV__ENSG00000188167|ENST00000342462|TMPPE;REV__nc|ENSG00000188167|Q6ZT21-2|TMPPE	33.921630207806714	0.48623198279849766	2				NaN	NaN	0	NaN	10573	4271	14844
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14847	39.031	NaN	1588.9	30	0	372.13	0.037				-1	DWLFGETLC	9	47	570.7568360919466	NaN	0	570.7565307617188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_DWLFGETLC(Carbamidomethyl (C))_	ENSG00000168398|ENST00000554311|BDKRB2;nc|ENSG00000168398|P30411-2|BDKRB2	17.364965105453717	0.37820932774828947	2				NaN	NaN	0	NaN	10574	4271	14844
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14858	39.056	NaN	2801.5	30	0	411.39	0.214	+			46319	VEKIDFDSV	9	67	526.2683950041628	1050.5222370751255	2	526.2686767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VEKIDFDSV_	ENSG00000178982|ENST00000248342|EIF3K	123.20810148215591	0.019257656778428764	2				NaN	NaN	0	NaN	10582	4274	14857
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14859	39.06	NaN	1589.8	30	0	221.94	0.106	+			41328	SVLSELLNK	9	57	501.7943293914078	1001.5741058496156	2	501.7942810058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVLSELLNK_	sp|P08546|DPOL_HCMVADNApolymerasecatalyticsubunitOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL54PE=1SV=2;sp|Q6SW77|DPOL_HCMVMDNApolymerasecatalyticsubunitOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL54PE=3SV=1	31.529811441608018	0.5085848003137583	2				NaN	NaN	0	NaN	10583	4274	14857
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14860	39.062	NaN	2540.6	30	0	255.87	0.034	+			35557	SAVTALWGK	9	52	466.7630289176499	931.5115049020998	2	466.7630615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAVTALWGK_	ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF	67.49366992349736	0.1516260258713357	2				NaN	NaN	0	NaN	10584	4274	14857
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14869	39.083	NaN	1779.9	30	0	344.51	0.141			+	4373	ATGTSALII	9	44	423.74947343700603	845.4843939408121	2	423.74969482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATGTSALII_	REV__ENST00000419696.1_1_1:117256762-117256939:-|nuORF	82.30502934623384	0.08758161712619916	2				NaN	NaN	0	NaN	10590	4277	14868
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14876	39.103	NaN	10346	30	0	1570.7	0.214	+			17899	IGFGDFVALQ	10	74	533.7827699511325	1065.550986969065	2	533.7838134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IGFGDFVALQ_	ENSG00000124249|ENST00000372861|KCNK15	71.87747018426188	0.26198133118427214	2				NaN	NaN	0	NaN	10594	4280	14875
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14877	39.107	NaN	1590	30	0	178.79	0.035			+	46130	VDLIALSTSA	10	56	495.27890460637923	988.5432562795585	2	495.2798156738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VDLIALSTSA_	REV__nc|ENSG00000293392|Q8IVK1-2|GLYCAM1;REV__nc|ENSG00000293392|Q8IVK1|GLYCAM1	34.172542307311794	0.6007644933930345	2				NaN	NaN	0	NaN	10595	4280	14875
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14883	39.123	NaN	1867	30	0	614.46	0.214			+	50047	WENEIAIK	8	55	501.7666352865425	1001.518717639885	2	501.7659606933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WENEIAIK_	REV__CCDC66|p.A265Sfs*9|1|0.15|ENSG00000180376|chr3:56567024-56567025|-/A|frameshift_variant;REV__CCDC66|p.V732*|1|0.25|ENSG00000180376|chr3:56617454-56617454|A/-|frameshift_variant;REV__ENSG00000180376|ENST00000394672|CCDC66;REV__nc|ENSG00000180376|A2RUB6-2|CCDC66;REV__nc|ENSG00000180376|A2RUB6-3|CCDC66	67.49366992349736	0.4277823096851425	2				NaN	NaN	0	NaN	10598	4283	14882
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14884	39.127	NaN	1195.3	30	0	83.173	0.034				-1	VTRAISDY	8	53	483.74794790404667	NaN	0	483.7482604980469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))VTRAISDY_	ENSG00000122254|ENST00000261374|HS3ST2;ENSG00000125430|ENST00000360954|HS3ST3B1;ENSG00000153976|ENST00000284110|HS3ST3A1;ENSG00000162040|ENST00000454677|HS3ST6;ENSG00000182601|ENST00000331351|HS3ST4;HS3ST3A1|p.T256M|1|0.2|ENSG00000153976|chr17:13496651-13496651|G/A|missense_variant;HS3ST3A1|p.T371Mfs*31|1|0.2|ENSG00000153976|chr17:13496306-13496307|-/ATGGATAACCA|frameshift_variant	31.954861631926434	1.7418937515398478	2				NaN	NaN	0	NaN	10599	4283	14882
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14892	39.147	NaN	4642.8	30	0	1067.6	0.214	+			44948	TVATFILQK	9	68	510.8077478835274	1019.6009428338548	2	510.8083190917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVATFILQK_	ENSG00000144580|ENST00000273064|CNOT9;nc|ENSG00000144580|Q92600-2|CNOT9;nc|ENSG00000144580|Q92600-3|CNOT9	115.49404669440601	0.023927554121326553	2				NaN	NaN	0	NaN	10604	4286	14891
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14893	39.15	NaN	2309	30	0	319.36	0.106	+			25335	LPDTLKVTY	9	67	525.2968065537888	1048.5790601743774	2	525.2980346679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LPDTLKVTY_	ENSG00000160255|ENST00000652462|ITGB2;ENST00000475170.5_1_21:46306285-46313576:-|nuORF;ENST00000498666.5_1_21:46313282-46313576:-|nuORF	76.16968421966216	0.11411088698345859	2				NaN	NaN	0	NaN	10605	4286	14891
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14894	39.152	NaN	1828.2	30	0	174.44	0.106	+			17147	HSTLPNTDL	9	58	499.2500982992822	996.4856436653644	2	499.2502136230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HSTLPNTDL_	ENST00000596217.1_2_19:50431895-50432066:-|nuORF	47.657333605630114	0.33044192980041115	2				NaN	NaN	0	NaN	10606	4286	14891
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14895	39.154	NaN	2400.8	30	0	403.01	0.106			+	44301	TSCPCKFAVV	10	65	527.7553668485245	1053.496180763849	2	527.756103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TSCPCKFAVV_	REV__ENSG00000178033|ENST00000368599|CALHM5	74.25504064058377	0.24255678544297835	2				NaN	NaN	0	NaN	10607	4286	14891
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14896	39.156	NaN	2385.1	30	0	343.13	0.033	+			44335	TSGIPHPAI	9	55	446.74741676823396	891.4802806032679	2	446.74847412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TSGIPHPAI_	ENSG00000152284|ENST00000282111|TCF7L1;TCF7L1|p.P301S|1|0.38|ENSG00000152284|chr2:85305315-85305315|C/T|missense_variant;TCF7L1|p.S323Afs*2|1|0.15|ENSG00000152284|chr2:85305375-85305375|C/-|frameshift_variant	42.47446043378293	0.39123495718708534	2				NaN	NaN	0	NaN	10608	4286	14891
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14904	39.175	NaN	7986.5	30	0	1238	0.214	+			17791	IETTGTYQL	9	77	513.2608496894109	1024.5071464456216	2	513.260986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IETTGTYQL_	ENSG00000007171|ENST00000313735|NOS2;nc|ENSG00000007171|P35228-2|NOS2;NOS2|p.A650Pfs*53|1|0.21|ENSG00000007171|chr17:27769063-27769063|C/-|frameshift_variant;NOS2|p.Y709*|1|0.33|ENSG00000007171|chr17:27767745-27767745|G/-|frameshift_variant	95.81516180277367	0.04847050768394289	2				NaN	NaN	0	NaN	10613	4289	14903
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14905	39.179	NaN	9229.3	30	0	1732.1	0.106				-1	 	0	69	487.25812239872886	972.5016918642577	2	487.2585144042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10614	4289	14903
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14906	39.181	NaN	4529.5	30	0	1154.5	0.106	+			41943	SVVSIVIGK	9	63	451.2888939407515	900.563234948303	2	451.2890930175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVVSIVIGK_	nc|ENSG00000136144|Q8NDN9-2|RCBTB1	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	10615	4289	14903
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14907	39.183	NaN	932.12	30	0	70.819	0.106	+			47744	VSGLSVVPV	9	43	428.7606649826325	855.506777032065	2	428.7600402832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSGLSVVPV_	ENST00000487891.1_1_3:49020199-49020700:+|nuORF	38.80614096846853	0.43426287593479557	2				NaN	NaN	0	NaN	10616	4289	14903
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14908	39.185	NaN	1373.6	30	0	192.58	0.036			+	32301	QTPKPCGSIE	10	53	530.2602855483408	1058.5060181634815	2	530.2603149414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QTPKPCGSIE_	REV__ENSG00000068878|ENST00000404125|PSME4;REV__nc|ENSG00000068878|Q14997-2|PSME4;REV__nc|ENSG00000068878|Q14997-3|PSME4	40.05817265558897	0.5486090488315611	2				NaN	NaN	0	NaN	10617	4289	14903
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14918	39.208	NaN	3127.1	30	0	161.29	0.214	+			11868	FTFSGREL	8	65	478.74506255822746	955.4755721832549	2	478.74493408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FTFSGREL_	AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK	39.252832667884924	0.6609488554722044	2				NaN	NaN	0	NaN	10624	4292	14917
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14919	39.212	NaN	2012	30	0	266.96	0.106			+	9940	EQWVEKAL	8	68	501.7666352865425	1001.518717639885	2	502.2681579589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EQWVEKAL_	REV__ENSG00000129646|ENST00000680821|QRICH2;REV__ENST00000524722.1_2_17:74270319-74300575:-|nuORF;REV__nc|ENSG00000129646|Q9H0J4-2|QRICH2;REV__nc|ENSG00000129646|Q9H0J4|QRICH2	49.44154591367651	0.597725784090933	2				NaN	NaN	0	NaN	10625	4292	14917
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14920	39.214	NaN	1652.2	30	0	631.78	0.106	+			2435	APGCGQGLTL	10	47	458.7310225378767	915.4474921425534	2	458.731689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_APGCGQGLTL_	ENST00000413123.5_1_2:175991908-176001171:-|nuORF	39.252832667884924	0.5560298534376815	2				NaN	NaN	0	NaN	10626	4292	14917
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14921	39.215	NaN	7911	30	0	1869.7	0.106	+			39509	STFNVFVGK	9	60	499.76855753841863	997.5225621436373	2	499.76812744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STFNVFVGK_	ENSG00000122642|ENST00000242209|FKBP9;ENST00000494374.5_1_7:32997059-33028356:+|nuORF;FKBP9|p.N129Ifs*10|7|0.31|ENSG00000122642|chr7:32975192-32975192|C/-|frameshift_variant;FKBP9|p.P380Lfs*6|1|0.38|ENSG00000122642|chr7:32996258-32996258|C/-|frameshift_variant;nc|ENSG00000122642|O95302-3|FKBP9	132.757866228626	0.013877640931359021	2				NaN	NaN	0	NaN	10627	4292	14917
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14922	39.217	NaN	4160.6	30	0	1029.9	0.036	+			8962	EFFKNIPAL	9	65	539.7993279702381	NaN	0	539.8006591796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EFFKNIPAL_	tr|U7SV28|U7SV28_FUSNUUvrABCsystemproteinAOS=FusobacteriumnucleatumCTI-5OX=1316586GN=uvrAPE=3SV=1	56.72105179125745	0.16330365735109603	2				NaN	NaN	0	NaN	10628	4292	14917
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14934	39.243	NaN	5997	30	0	1994.8	0.214	+			47508	VQLNMPGSDL	10	55	537.2682438512837	1072.5219347693674	2	537.2693481445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VQLNMPGSDL_	ENSG00000160271|ENST00000372050|RALGDS;nc|ENSG00000160271|Q12967-2|RALGDS;nc|ENSG00000160271|Q12967-3|RALGDS;nc|ENSG00000160271|Q12967-4|RALGDS;nc|ENSG00000160271|Q12967-5|RALGDS;nc|ENSG00000160271|Q12967-6|RALGDS	51.19269402634007	0.44601001148513897	2				NaN	NaN	0	NaN	10637	4295	14933
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14935	39.246	NaN	3668.6	30	0	338.59	0.106			+	44740	TTLYDVVRA	9	65	519.2846335836391	1036.5547142340781	2	518.7876586914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTLYDVVRA_	REV__ENST00000399325.2_1_X:133406709-133407198:+|nuORF	42.86426827375447	0.38666266728046506	2				NaN	NaN	0	NaN	10638	4295	14933
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14936	39.248	NaN	1590.2	30	0	167.07	0.036	+			18627	ISSVVYLRE	9	58	533.2999141930917	1064.5852754529833	2	533.3012084960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ISSVVYLRE_	DSTYK|p.D485V|1|0.12|ENSG00000133059|chr1:205163826-205163826|T/A|missense_variant	39.252832667884924	0.4290233611298554	2				NaN	NaN	0	NaN	10639	4295	14933
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14943	39.266	NaN	11068	30	0	1422.6	0.214				-1	 	0	54	408.7444779479038	815.4744029626077	2	408.7447814941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10643	4298	14942
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14944	39.27	NaN	2439.2	30	0	307.29	0.106			+	-1	NNLSFTMIL	9	65	534.7722028843383	NaN	0	534.772216796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_NNLSFTM(Oxidation (M))IL_	REV__ENSG00000015520|ENST00000381160|NPC1L1;REV__nc|ENSG00000015520|Q9UHC9-2|NPC1L1;REV__nc|ENSG00000015520|Q9UHC9-3|NPC1L1;REV__nc|ENSG00000015520|Q9UHC9-4|NPC1L1;REV__nc|ENSG00000015520|Q9UHC9|NPC1L1	57.81127852772723	0.15865383123342353	2				NaN	NaN	0	NaN	10644	4298	14942
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14945	39.272	NaN	1911	30	0	261.85	0.106	+			4532	ATKVFQGVL	9	57	481.7867509268247	NaN	0	481.7863464355469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATKVFQGVL_	ENSG00000188157|ENST00000379370|AGRN;nc|ENSG00000188157|O00468-2|AGRN;nc|ENSG00000188157|O00468-3|AGRN;nc|ENSG00000188157|O00468-4|AGRN;nc|ENSG00000188157|O00468-5|AGRN;nc|ENSG00000188157|O00468-7|AGRN;nc|ENSG00000188157|O00468|AGRN	27.882242232435846	0.3367954786602879	2				NaN	NaN	0	NaN	10645	4298	14942
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14946	39.273	NaN	1428.8	30	0	337.05	0.106	+			34377	RTRLQKQN	8	56	522.3089968338454	NaN	0	522.308837890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RTRLQKQN_	ENSG00000100393|ENST00000263253|EP300;EP300|p.M1470Cfs*26|1|0.16|ENSG00000100393|chr22:41170521-41170521|A/-|frameshift_variant	23.04248740728303	1.7418937515398478	2				NaN	NaN	0	NaN	10646	4298	14942
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14947	39.275	NaN	1522.6	30	0	123.14	0.036			+	6406	AVVHQFCHL	9	58	527.2704944843002	NaN	0	527.75634765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVVHQFCHL_	REV__ENSG00000160117|ENST00000404085|ANKLE1;REV__ENST00000404085.5_1_19:17392508-17397358:+|nuORF;REV__nc|ENSG00000160117|Q8NAG6-1|ANKLE1	40.5726180659479	0.27166212580479165	2				NaN	NaN	0	NaN	10647	4298	14942
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14962	39.307	NaN	7025.3	30	0	729.98	0.143	+			45306	TVSDAILRY	9	76	519.2846335836391	1036.5547142340781	2	519.2867431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVSDAILRY_	ENSG00000002919|ENST00000359238|SNX11;nc|ENSG00000002919|Q9Y5W9-2|SNX11	93.5975768576971	0.05472259948179787	2				NaN	NaN	0	NaN	10659	4301	14961
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14970	39.329	NaN	2500.9	30	0	603.13	0.214	+			7187	DAHGSFCF	8	55	470.68406893006147	939.353584926923	2	470.6842346191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_DAHGSFC(Carbamidomethyl (C))F_	ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;nc|ENSG00000185164|Q5JPE7-3|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2;NOMO1|p.P1102Hfs*42|1|0.36|ENSG00000103512|chr16:14886838-14886838|C/-|frameshift_variant	52.29916861842294	0.578018602984656	2				NaN	NaN	0	NaN	10664	4304	14969
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14971	39.332	NaN	1237	30	0	161.11	0.106	+			13219	GIGSVLPLK	9	43	442.28381979292124	882.5530866526425	2	442.28411865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GIGSVLPLK_	ENSG00000162437|ENST00000294428|RAVER2;nc|ENSG00000162437|Q9HCJ3-2|RAVER2	68.78682469695295	0.14603441672067394	2				NaN	NaN	0	NaN	10665	4304	14969
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14972	39.334	NaN	887.49	30	0	38.4	0.106	+			46616	VFVEATHVL	9	50	507.7845740218662	NaN	0	507.78466796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VFVEATHVL_	CDC23|p.L234Sfs*23|1|0.44|ENSG00000094880|chr5:138198737-138198738|-/A|frameshift_variant;ENSG00000094880|ENST00000394886|CDC23;ENST00000482948.5_1_5:137536747-137548896:-|nuORF;nc|ENSG00000094880|Q9UJX2-3|CDC23	30.503639358989545	0.3235605894931338	2				NaN	NaN	0	NaN	10666	4304	14969
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14973	39.336	NaN	1796.1	30	0	218.13	0.106	+			45230	TVPNAVTSL	9	52	451.2529265960467	NaN	0	451.2528381347656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TVPNAVTSL_	ENSG00000080031|ENST00000376350|PTPRH;ENST00000588559.5_1_19:55705613-55720813:-|nuORF;nc|ENSG00000080031|Q9HD43-2|PTPRH;nc|ENSG00000080031|Q9HD43-3|PTPRH	47.95952297671804	0.22075498469600283	2				NaN	NaN	0	NaN	10667	4304	14969
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14974	39.338	NaN	1165.5	30	0	163.44	0.034	+			26262	LSSWCIPL	8	52	459.7425231933594	NaN	0	459.7425231933594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSSWCIPL_	ENSG00000164751|ENST00000357039|PEX2	74.51659920185547	1.7418937515398478	2				NaN	NaN	0	NaN	10668	4304	14969
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14985	39.363	NaN	2938.9	30	0	557.61	0.214	+			26309	LSVQDQPSL	9	52	493.76088041470655	985.5072078962131	2	493.76116943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSVQDQPSL_	ENSG00000080802|ENST00000541284|CNOT4;nc|ENSG00000080802|O95628-2|CNOT4;nc|ENSG00000080802|O95628-3|CNOT4;nc|ENSG00000080802|O95628-4|CNOT4;nc|ENSG00000080802|O95628-6|CNOT4;nc|ENSG00000080802|O95628-7|CNOT4;nc|ENSG00000080802|O95628-8|CNOT4;nc|ENSG00000080802|O95628-9|CNOT4;nc|ENSG00000080802|O95628|CNOT4	56.72105179125745	0.24094814563026265	2				NaN	NaN	0	NaN	10676	4307	14984
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14986	39.366	NaN	1252.7	30	0	199.87	0.037	+			39261	STANYDFVLK	10	58	579.294916056286	1156.5752791793718	2	579.295166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STANYDFVLK_	ENSG00000160271|ENST00000372050|RALGDS;ENST00000493438.5_1_9:135973976-135976008:-|nuORF;nc|ENSG00000160271|Q12967-3|RALGDS;nc|ENSG00000160271|Q12967-4|RALGDS;nc|ENSG00000160271|Q12967-5|RALGDS;nc|ENSG00000160271|Q12967-6|RALGDS	56.632244143249146	0.3964695498866976	2				NaN	NaN	0	NaN	10677	4307	14984
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14994	39.385	NaN	157690	30	0	41342	0.167	+			37136	SITSVFITK	9	80	498.2921727258924	994.5697925185848	2	498.29229736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SITSVFITK_	ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;TRRAP-ASNS|1|fusion;TRRAP-ASNS|2|fusion;TRRAP|p.K3443Sfs*19|1|0.28|ENSG00000196367|chr7:99004246-99004246|A/-|frameshift_variant	176.44474024533739	0.0016668318535579616	2				NaN	NaN	0	NaN	10682	4310	14993
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14995	39.388	NaN	2371.6	30	0	174.27	0.106	+			28252	NDIVLYLK	8	65	489.2865936423271	976.5586343514542	2	489.2870178222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NDIVLYLK_	DNAH17|p.D2341Tfs*111|1|0.32|ENSG00000187775|chr17:78486305-78486305|G/-|frameshift_variant;DNAH17|p.G2596Afs*13|1|0.33|ENSG00000187775|chr17:78479600-78479600|G/-|frameshift_variant;DNAH17|p.K2058Qfs*32|1|0.09|ENSG00000187775|chr17:78494691-78494692|-/G|frameshift_variant;DNAH17|p.K3895Nfs*2|1|0.24|ENSG00000187775|chr17:78439210-78439210|T/-|frameshift_variant;DNAH17|p.N4131Tfs*34|2|0.38|ENSG00000187775|chr17:78429136-78429136|G/-|frameshift_variant;DNAH17|p.R1580Gfs*23|1|0.38|ENSG00000187775|chr17:78506785-78506785|G/-|frameshift_variant;DNAH17|p.R293W|1|0.28|ENSG00000187775|chr17:78570989-78570989|G/A|missense_variant;ENSG00000187775|ENST00000389840|DNAH17;ENST00000589793.1_1_17:76539878-76567391:-|nuORF	44.116797842482775	0.6307669463330267	2				NaN	NaN	0	NaN	10683	4310	14993
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14996	39.39	NaN	2519	30	0	1052.9	0.106	+			32643	QYVSAFSKL	9	53	521.7817620647401	1041.54897119628	2	521.7830810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QYVSAFSKL_	ENSG00000165283|ENST00000356493|STOML2;nc|ENSG00000165283|Q9UJZ1-2|STOML2	55.08391021199286	0.2545954270840753	2				NaN	NaN	0	NaN	10684	4310	14993
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14997	39.391	NaN	1797.9	30	0	165.57	0.106	+			8757	EEFTVARL	8	59	482.7576589143292	963.5007648954585	2	482.7578430175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EEFTVARL_	ENSG00000155980|ENST00000455537|KIF5A;ENSG00000170759|ENST00000302418|KIF5B;KIF5B|p.M622Wfs*8|1|0.15|ENSG00000170759|chr10:32022898-32022898|T/-|frameshift_variant	99.37495909608758	0.2510236104623939	2				NaN	NaN	0	NaN	10685	4310	14993
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14998	39.393	NaN	2408.4	30	0	210.65	0.106				-1	VPSPAQIMY	9	61	511.2542245625336	1020.4938961918672	2	511.254638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_VPSPAQIM(Oxidation (M))Y_	ENSG00000179051|ENST00000375436|RCC2;RCC2|p.A423Qfs*56|1|0.13|ENSG00000179051|chr1:17413120-17413120|T/-|frameshift_variant	66.42927471994793	0.16001998865088202	2				NaN	NaN	0	NaN	10686	4310	14993
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14999	39.395	NaN	3925.4	30	0	607.98	0.106				-1	VMSPVGKTLK	10	63	538.3115666954449	NaN	0	538.31103515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_VM(Oxidation (M))SPVGKTLK_	ENST00000449307.3_1_7:65992906-65993080:-|nuORF	35.15202426646627	0.38475398474706135	2				NaN	NaN	0	NaN	10687	4310	14993
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15000	39.397	NaN	1766.8	30	0	216.79	0.035			+	25933	LSHDAICLT	9	60	515.2541923775931	1028.493831821986	2	515.7561645507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_LSHDAIC(Carbamidomethyl (C))LT_	REV__NEUROG3|p.R140C|1|0.29|ENSG00000122859|chr10:69572626-69572626|G/A|missense_variant	51.33545320467046	0.2872990594074956	2				NaN	NaN	0	NaN	10688	4310	14993
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15012	39.422	NaN	1778.8	30	0	159.53	0.214			+	37308	SLDILQKI	8	59	465.2864104837289	NaN	0	465.286376953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLDILQKI_	REV__tr|U7T2P8|U7T2P8_FUSNUTwo-componentsystem,responseregulatorYesNOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00413PE=4SV=1	63.30626980617807	1.7418937515398478	2				NaN	NaN	0	NaN	10697	4313	15011
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15013	39.426	NaN	1375.2	30	0	133.38	0.106				-1	GVRCSCPVGF	10	63	541.2476809290333	1080.4808089248666	2	541.249267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GVRC(Carbamidomethyl (C))SCPVGF_	ENSG00000159307|ENST00000360835|SCUBE1;SCUBE1|p.G673Wfs*39|1|0.31|ENSG00000159307|chr22:43214126-43214127|-/A|frameshift_variant	63.30626980617807	0.33577009411590547	2				NaN	NaN	0	NaN	10698	4313	15011
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15014	39.428	NaN	1424.4	30	0	331.06	0.106			+	-1	CVACKHVKF	9	51	546.2810424225963	NaN	0	546.2811279296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_CVAC(Carbamidomethyl (C))KHVKF_	REV__ENSG00000074657|ENST00000591808|ZNF532;REV__ENST00000590442.1_1_18:56648660-56651695:+|nuORF;REV__ENST00000592249.5_1_18:56620439-56651695:+|nuORF;REV__ZNF532|p.T1272Lfs*8|1|0.46|ENSG00000074657|chr18:58984370-58984370|A/-|frameshift_variant	38.80614096846853	0.28164298475537564	2				NaN	NaN	0	NaN	10699	4313	15011
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15015	39.43	NaN	1806.5	30	0	407.43	0.037	+			47068	VLHKHQRAL	9	41	367.89149705777237	NaN	0	367.8914489746094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VLHKHQRAL_	ENSG00000106266|ENST00000222990|SNX8;ENST00000480807.1_1_7:2294693-2297236:-|nuORF	24.519189625965996	0.35377483217337163	2				NaN	NaN	0	NaN	10700	4313	15011
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15023	39.449	NaN	5365.4	30	0	1138	0.214	+			40869	SVFGTMPLK	9	61	490.2670803790178	978.5196078248356	2	490.2676696777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVFGTMPLK_	ENSG00000151348|ENST00000533608|EXT2;nc|ENSG00000151348|Q93063-2|EXT2;nc|ENSG00000151348|Q93063-3|EXT2	52.936696900407355	0.27249468807391813	2				NaN	NaN	0	NaN	10705	4316	15022
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15024	39.453	NaN	2684.3	30	0	284.78	0.106			+	42865	TEGLINVTY	9	62	505.2647294021568	1008.5149058711136	2	505.26434326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEGLINVTY_	REV__ADNP2|p.A325Cfs*59|1|0.31|ENSG00000101544|chr18:80136377-80136378|-/C|frameshift_variant;REV__ADNP2|p.K1045Nfs*29|1|0.42|ENSG00000101544|chr18:80138543-80138543|A/-|frameshift_variant;REV__ADNP2|p.P324Lfs*8|2|0.52|ENSG00000101544|chr18:80136378-80136378|C/-|frameshift_variant;REV__ADNP2|p.P500Qfs*7|1|0.18|ENSG00000101544|chr18:80136908-80136908|C/-|frameshift_variant;REV__ADNP2|p.P628Lfs*39|1|0.11|ENSG00000101544|chr18:80137292-80137292|C/-|frameshift_variant;REV__ENSG00000101544|ENST00000262198|ADNP2	71.87747018426188	0.13267044672804276	2				NaN	NaN	0	NaN	10706	4316	15022
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15025	39.455	NaN	1779.1	30	0	406.51	0.106			+	2783	ARQPLPVPLQ	10	50	559.8383821202514	NaN	0	559.8385009765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ARQPLPVPLQ_	REV__ENST00000460939.5_1_11:62369776-62370417:-|nuORF	32.81241826257853	0.3924360933802784	2				NaN	NaN	0	NaN	10707	4316	15022
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15026	39.457	NaN	670.98	30	0	117.6	0.032			+	23723	LAVEPPGI	8	34	398.2342558183975	NaN	0	398.2342224121094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LAVEPPGI_	REV__ENSG00000016402|ENST00000316649|IL20RA;REV__nc|ENSG00000016402|Q9UHF4-2|IL20RA;REV__nc|ENSG00000016402|Q9UHF4-3|IL20RA	21.70233525837049	1.7418937515398478	2				NaN	NaN	0	NaN	10708	4316	15022
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15033	39.475	NaN	3014	30	0	438.26	0.214	+			47459	VPVSVVSDSY	10	63	526.2683142037652	1050.5220754743302	2	526.2689819335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VPVSVVSDSY_	ENSG00000105835|ENST00000222553|NAMPT;ENST00000491027.5_1_7:105903822-105925330:-|nuORF	76.7741389293348	0.22197596950688292	2				NaN	NaN	0	NaN	10712	4319	15032
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15034	39.478	NaN	1170.1	30	0	145.33	0.106	+			12795	GELVKAIVV	9	52	464.29694666748463	926.5793404017693	2	464.296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GELVKAIVV_	ATP13A3|p.F1107Lfs*5|1|0.42|ENSG00000133657|chr3:194419960-194419960|A/-|frameshift_variant;ATP13A3|p.I476Sfs*11|1|0.19|ENSG00000133657|chr3:194446998-194446998|T/-|frameshift_variant;ATP13A3|p.L1114Ffs*17|1|0.25|ENSG00000133657|chr3:194419939-194419940|-/A|frameshift_variant;ATP13A3|p.L1114Yfs*22|1|0.23|ENSG00000133657|chr3:194419940-194419940|A/-|frameshift_variant;ATP13A3|p.P1198Lfs*19|1|0.04|ENSG00000133657|chr3:194406007-194406008|-/ATATAGTA|frameshift_variant;ATP13A3|p.S1110Ffs*21|2|0.22|ENSG00000133657|chr3:194419952-194419953|-/A|frameshift_variant;ATP13A3|p.V1108Cfs*23|1|0.26|ENSG00000133657|chr3:194419959-194419960|-/A|frameshift_variant;ENSG00000133657|ENST00000645319|ATP13A3;nc|ENSG00000133657|Q9H7F0-2|ATP13A3;nc|ENSG00000133657|Q9H7F0|ATP13A3	32.81241826257853	0.4965981579233955	2				NaN	NaN	0	NaN	10713	4319	15032
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15035	39.48	NaN	1125.7	30	0	190.91	0.037			+	-1	LSTMIFLCAA	10	50	563.7860448746494	1125.5575368160987	2	563.786865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LSTMIFLC(Carbamidomethyl (C))AA_	REV__USH2A|p.R551Ffs*46|1|0.11|ENSG00000042781|chr1:216292364-216292365|-/ATCACACTAGAACAAAA|frameshift_variant	30.503639358989545	0.6307262373768582	2				NaN	NaN	0	NaN	10714	4319	15032
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15042	39.498	NaN	1544.2	30	0	200.36	0.146			+	11496	FPCQHRKAAP	10	63	577.7970369875803	1153.5795210419606	2	577.7979736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FPCQHRKAAP_	REV__ENSG00000266265|ENST00000583337|KLF14	42.396135135203025	0.5270658956260207	2				NaN	NaN	0	NaN	10718	4322	15041
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15052	39.522	NaN	3830.1	30	0	1202.4	0.214			+	27179	MDPQQVLQT	9	55	530.2602855483408	1058.5060181634815	2	530.2610473632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MDPQQVLQT_	REV__ENSG00000165959|ENST00000298912|CLMN	25.57405402267927	0.5642445186134241	2				NaN	NaN	0	NaN	10725	4325	15051
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15053	39.525	NaN	3162.7	30	0	593.93	0.106	+			5834	AVIGPDVFAK	10	64	508.7922118689177	1015.5698708046355	2	508.79168701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVIGPDVFAK_	ENSG00000261150|ENST00000615648|EPPK1;EPPK1|p.G2015Vfs*36|2|0.33|ENSG00000261150|chr8:143867210-143867210|C/-|frameshift_variant;EPPK1|p.Q829Rfs*8|1|0.05|ENSG00000261150|chr8:143870770-143870770|C/-|frameshift_variant;EPPK1|p.Y695Ifs*68|1|0.36|ENSG00000261150|chr8:143871171-143871172|-/T|frameshift_variant	45.97224482568171	0.49411383603842696	2				NaN	NaN	0	NaN	10726	4325	15051
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15054	39.527	NaN	1699.1	30	0	134.27	0.106	+			25993	LSKIREEY	8	62	519.2846335836391	1036.5547142340781	2	519.2830810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSKIREEY_	ENSG00000261456|ENST00000568584|TUBB8	47.657333605630114	0.6087971902037268	2				NaN	NaN	0	NaN	10727	4325	15051
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15055	39.529	NaN	2742.7	30	0	610.09	0.106				-1	 	0	50	437.73680705909817	873.4590611849964	2	437.7364807128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10728	4325	15051
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15056	39.531	NaN	1158.6	30	0	131.24	0.036	+			11567	FPMEIRQY	8	53	542.2679250062174	1082.5212970792347	2	542.27001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FPMEIRQY_	ENSG00000115415|ENST00000361099|STAT1;nc|ENSG00000115415|P42224-2|STAT1;STAT1|p.D534Mfs*14|1|0.24|ENSG00000115415|chr2:190980653-190980653|G/-|frameshift_variant;STAT1|p.K567Nfs*25|2|0.2|ENSG00000115415|chr2:190979798-190979798|T/-|frameshift_variant	25.57405402267927	0.7618694492699909	2				NaN	NaN	0	NaN	10729	4325	15051
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15065	39.553	NaN	2243.6	30	0	248.69	0.143			+	51607	YYSVRSVF	8	57	510.7591774695576	1019.5038020059152	2	511.26019287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YYSVRSVF_	REV__tr|U7SV61|U7SV61_FUSNUSalt-inducedoutermembraneproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01142PE=4SV=1	44.116797842482775	0.6307669463330267	2				NaN	NaN	0	NaN	10735	4328	15064
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15071	39.571	NaN	4198	30	0	714.54	0.214	+			50388	YAAEYANAL	9	65	493.2343077303852	984.4540625275704	2	493.23468017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YAAEYANAL_	ENSG00000140274|ENST00000323030|DUOXA2	122.1759843771914	0.019882474861609503	2				NaN	NaN	0	NaN	10738	4331	15070
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15072	39.574	NaN	3080.4	30	0	386.69	0.106	+			36067	SEIYIHGL	8	60	466.24748099411045	930.4804090550209	2	466.24786376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEIYIHGL_	ENSG00000172336|ENST00000303151|POP7	83.28718786952967	0.2977916691876266	2				NaN	NaN	0	NaN	10739	4331	15070
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15073	39.576	NaN	1608	30	0	156.72	0.034			+	1096	AELEVKKF	8	53	482.2784792246479	NaN	0	482.27880859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AELEVKKF_	REV__tr|U7SLV3|U7SLV3_FUSNUYwqI/YxiCfamilyproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01902PE=4SV=1;REV__tr|U7T3K6|U7T3K6_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00699PE=4SV=1	34.172542307311794	1.7418937515398478	2				NaN	NaN	0	NaN	10740	4331	15070
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15084	39.6	NaN	4686.3	30	0	1007.8	0.214			+	25222	LMVGQSPSAPS	11	71	537.2682438512837	1072.5219347693674	2	537.269287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LMVGQSPSAPS_	REV__ENSG00000104081|ENST00000354670|BMF;REV__nc|ENSG00000104081|Q96LC9-2|BMF;REV__nc|ENSG00000104081|Q96LC9-3|BMF	41.42661286455405	0.5384226294179143	2				NaN	NaN	0	NaN	10748	4334	15083
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15085	39.603	NaN	2571	30	0	319.09	0.034	+			15655	GVLSDINLK	9	58	479.7815630175411	957.5485731018822	2	479.78204345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GVLSDINLK_	ENSG00000173848|ENST00000355029|NET1;ENST00000484741.1_1_10:5496419-5498268:+|nuORF;nc|ENSG00000173848|Q7Z628-2|NET1;NET1|p.I346M|1|0.08|ENSG00000173848|chr10:5454959-5454959|A/G|missense_variant	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	10749	4334	15083
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15094	39.625	NaN	2469.2	30	0	105.11	0.214	+			37980	SPIDVVEKY	9	66	525.2791426948727	1048.5437324565453	2	525.2796630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SPIDVVEKY_	ENSG00000117153|ENST00000367261|KLHL12;nc|ENSG00000117153|Q53G59-2|KLHL12	66.96192283764107	0.15557981141143568	2				NaN	NaN	0	NaN	10755	4337	15093
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15095	39.629	NaN	1762.4	30	0	245.19	0.035	+			46532	VFAEKITSL	9	56	504.2930290409192	1006.5715051486384	2	504.29620361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VFAEKITSL_	CDR2|p.T201Qfs*2|1|0.34|ENSG00000140743|chr16:22347729-22347729|T/-|frameshift_variant;ENSG00000140743|ENST00000268383|CDR2	49.536043120802724	0.308405419312776	2				NaN	NaN	0	NaN	10756	4337	15093
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15107	39.654	NaN	5987.1	30	0	1501.3	0.214	+			39148	SSVPGVRLL	9	53	464.2843946378224	926.5542363424448	2	464.2841491699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSVPGVRLL_	ENSG00000026025|ENST00000544301|VIM;ENST00000485947.1_1_10:17271421-17272784:+|nuORF;VIM|p.R71W|1|0.4|ENSG00000026025|chr10:17229633-17229633|C/T|missense_variant	90.36981228632155	0.0638227155548745	2				NaN	NaN	0	NaN	10765	4340	15106
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15108	39.658	NaN	919.59	30	0	192.73	0.106			+	18239	INVATPDL	8	39	421.73402078432184	NaN	0	421.7339172363281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_INVATPDL_	REV__ENSG00000066827|ENST00000377838|ZFAT;REV__ENST00000523243.5_1_8:135490727-135577256:-|nuORF;REV__nc|ENSG00000066827|Q9P243-2|ZFAT;REV__nc|ENSG00000066827|Q9P243-4|ZFAT	34.172542307311794	1.7418937515398478	2				NaN	NaN	0	NaN	10766	4340	15106
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15109	39.66	NaN	585.37	30	0	48.855	0.106			+	38598	SSGGVIWI	8	41	409.72422230792984	NaN	0	409.72412109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSGGVIWI_	REV__ENSG00000178700|ENST00000314636|DHFR2	21.70233525837049	1.7418937515398478	2				NaN	NaN	0	NaN	10767	4340	15106
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15110	39.661	NaN	1090.7	30	0	65.972	0.034			+	25906	LSGILAAINT	10	60	486.78861867722264	971.5626844212453	2	486.7884521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSGILAAINT_	REV__ABCA12|p.F2109Lfs*25|2|0.16|ENSG00000144452|chr2:214955268-214955268|A/-|frameshift_variant;REV__ABCA12|p.N1671Kfs*2|1|0.24|ENSG00000144452|chr2:214978431-214978432|-/T|frameshift_variant;REV__ABCA12|p.T1534Nfs*8|1|0.1|ENSG00000144452|chr2:214980622-214980623|-/T|frameshift_variant;REV__ABCA12|p.Y2042Lfs*23|1|0.04|ENSG00000144452|chr2:214956772-214956773|-/G|frameshift_variant;REV__ENSG00000144452|ENST00000272895|ABCA12;REV__nc|ENSG00000144452|Q86UK0-2|ABCA12	30.317721548370564	0.6322445173429027	2				NaN	NaN	0	NaN	10768	4340	15106
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15114	39.676	NaN	1816.8	30	0	325.11	0.142	+			25481	LPSDKALVL	9	47	478.29432553589305	954.5740981385861	2	478.2945251464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LPSDKALVL_	DST|p.K5076Nfs*24|1|0.31|ENSG00000151914|chr6:56472218-56472218|T/-|frameshift_variant;DST|p.T4428Nfs*23|1|0.12|ENSG00000151914|chr6:56497896-56497897|-/T|frameshift_variant;ENSG00000151914|ENST00000680361|DST;nc|ENSG00000151914|Q03001-14|DST;nc|ENSG00000151914|Q03001-8|DST;nc|ENSG00000151914|Q03001|DST	40.77816245573522	0.41113185337114944	2				NaN	NaN	0	NaN	10769	4343	15113
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15121	39.696	NaN	3040.8	30	0	349.28	0.143			+	47413	VPPELSAVAPG	11	68	518.7872073819116	1035.559861830623	2	518.7872314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VPPELSAVAPG_	REV__ENSG00000139289|ENST00000266671|PHLDA1	40.77816245573522	0.5472954108598816	2				NaN	NaN	0	NaN	10773	4346	15120
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15135	39.737	NaN	3377.1	30	0	564.73	0.143	+			37595	SLPLPQDLL	9	59	498.2921727258924	994.5697925185848	2	498.2923889160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLPLPQDLL_	ENST00000424690.1_1_3:174952966-174953104:-|nuORF	34.172542307311794	0.4838870758800184	2				NaN	NaN	0	NaN	10781	4352	15134
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15144	39.761	NaN	3088.8	30	0	499.09	0.214				-1	CPIKEVVLY	9	65	560.806840076768	1119.599127220336	2	560.8087768554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_C(Carbamidomethyl (C))PIKEVVLY_	ENSG00000136261|ENST00000258761|BZW2	39.252832667884924	0.4290233611298554	2				NaN	NaN	0	NaN	10787	4355	15143
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15145	39.764	NaN	3767.8	30	0	500.76	0.106	+			45147	TVLQYVVGR	9	69	517.8032599932249	1033.5919670532496	2	517.8051147460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVLQYVVGR_	ENSG00000155561|ENST00000285968|NUP205;NUP205|p.S1260N|1|0.36|ENSG00000155561|chr7:135618419-135618419|G/A|missense_variant	104.0567914643314	0.03506238181059741	2				NaN	NaN	0	NaN	10788	4355	15143
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15146	39.766	NaN	3802.7	30	0	499.56	0.034	+			17574	IEAPIRMM	8	59	480.75338652098003	959.4922201087601	2	480.75341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IEAPIRMM_	ENSG00000198712|ENST00000361739|MT-CO2	53.351449002276354	0.5676011784961348	2				NaN	NaN	0	NaN	10789	4355	15143
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15155	39.788	NaN	2915.2	30	0	307.57	0.214	+			44253	TSAFMPVLK	9	64	497.27494562770863	992.5353383222173	2	497.2752380371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSAFMPVLK_	ENSG00000138674|ENST00000395310|SEC31A;ENST00000505479.1_1_4:83740229-83742267:-|nuORF;nc|ENSG00000138674|O94979-10|SEC31A;nc|ENSG00000138674|O94979-2|SEC31A;nc|ENSG00000138674|O94979-3|SEC31A;nc|ENSG00000138674|O94979-4|SEC31A;nc|ENSG00000138674|O94979-6|SEC31A;nc|ENSG00000138674|O94979-7|SEC31A;nc|ENSG00000138674|O94979-8|SEC31A;nc|ENSG00000138674|O94979-9|SEC31A	96.19043198914106	0.047412499214244314	2				NaN	NaN	0	NaN	10795	4358	15154
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15156	39.791	NaN	7672.6	30	0	2806.2	0.036	+			29109	NTQDVLIFK	9	66	539.3002008694826	1076.5858488057652	2	539.803955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NTQDVLIFK_	ENSG00000156958|ENST00000560031|GALK2;nc|ENSG00000156958|Q01415-2|GALK2	104.01359247289065	0.03510646158778409	2				NaN	NaN	0	NaN	10796	4358	15154
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15165	39.813	NaN	2768.8	30	0	337.07	0.214				-1	 	0	52	471.2395896712488	940.4646264092976	2	471.2395935058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10802	4361	15164
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15166	39.817	NaN	1864.4	30	0	200.77	0.034	+			49110	VVLGTGYKL	9	61	475.28921389223285	948.5638748512657	2	475.2890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVLGTGYKL_	ENSG00000137877|ENST00000320955|SPTBN5;SPTBN5|p.A3297Gfs*48|1|0.56|ENSG00000137877|chr15:41853672-41853673|-/C|frameshift_variant	47.657333605630114	0.33044192980041115	2				NaN	NaN	0	NaN	10803	4361	15164
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15177	39.842	NaN	5850.8	30	0	2124.7	0.214	+			26736	LVLPKIFKT	9	44	353.5703382071074	1057.6891852215222	3	353.5704650878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LVLPKIFKT_	HERV35I-int_dup77|chr3:106541134-106546233:+|1.3860853119714591|0.1976016791882729|2.81|468.0|276|2|anti-sense	54.776311868738084	0.25715957988447635	2				NaN	NaN	0	NaN	10811	4364	15176
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15178	39.845	NaN	1994.6	30	0	251.7	0.036				-1	SYDFTCRF	8	60	548.2329051510602	1094.4512573689203	2	548.2333374023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SYDFTC(Carbamidomethyl (C))RF_	ENST00000491694.1_1_3:111658417-111664240:+|nuORF	45.9519527083369	0.6193794311207887	2				NaN	NaN	0	NaN	10812	4364	15176
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15189	39.871	NaN	6126.5	30	0	2041.8	0.214				-1	 	0	64	530.2602855483408	1058.5060181634815	2	530.2612915039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10820	4367	15188
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15190	39.874	NaN	11913	30	0	2519.8	0.106				-1	 	0	79	546.7872105269498	1091.5598681206995	2	546.7879028320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10821	4367	15188
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15191	39.876	NaN	5760.5	30	0	1133.2	0.034				-1	 	0	64	485.7996040483053	969.5846551634106	2	485.7995300292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10822	4367	15188
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15202	39.901	NaN	8057.9	30	0	904.39	0.214				-1	 	0	61	537.799938154564	1073.5853233759278	2	537.8011474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10830	4370	15201
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15203	39.905	NaN	2500.4	30	0	367.45	0.106	+			11894	FTSPPSLFK	9	54	512.2786563307131	1022.5427597282263	2	512.2791137695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FTSPPSLFK_	ENSG00000145216|ENST00000337488|FIP1L1;ENST00000505125.5_1_4:54245288-54325613:+|nuORF;ENST00000513975.5_1_4:54244032-54306933:+|nuORF;FIP1L1|p.D472Efs*3|1|0.45|ENSG00000145216|chr4:53453049-53453050|-/G|frameshift_variant;FIP1L1|p.R473Lfs*2|1|0.5|ENSG00000145216|chr4:53453051-53453052|-/T|frameshift_variant;nc|ENSG00000145216|Q6UN15-3|FIP1L1;nc|ENSG00000145216|Q6UN15-4|FIP1L1;nc|ENSG00000145216|Q6UN15-5|FIP1L1	54.776311868738084	0.25715957988447635	2				NaN	NaN	0	NaN	10831	4370	15201
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15204	39.907	NaN	1906.1	30	0	232.15	0.106			+	18609	ISSCILAVK	9	55	467.275083603176	932.535614273152	2	467.2754821777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ISSCILAVK_	REV__ENSG00000160856|ENST00000368184|FCRL3;REV__ENST00000480682.5_1_1:157667440-157670285:-|nuORF;REV__ENST00000494724.5_1_1:157667081-157670285:-|nuORF;REV__FCRL3|p.R272Gfs*3|6|0.31|ENSG00000160856|chr1:157697170-157697170|T/-|frameshift_variant;REV__FCRL3|p.R272Kfs*16|1|0.31|ENSG00000160856|chr1:157697169-157697170|-/T|frameshift_variant;REV__nc|ENSG00000160856|Q96P31-2|FCRL3;REV__nc|ENSG00000160856|Q96P31-3|FCRL3;REV__nc|ENSG00000160856|Q96P31-4|FCRL3;REV__nc|ENSG00000160856|Q96P31-5|FCRL3;REV__nc|ENSG00000160856|Q96P31-6|FCRL3;REV__nc|ENSG00000160856|Q96P31-7|FCRL3	53.351449002276354	0.2690372970092375	2				NaN	NaN	0	NaN	10832	4370	15201
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15205	39.909	NaN	1439.8	30	0	156.81	0.106	+			27257	MESLVVSW	8	50	475.7373962402344	NaN	0	475.7373962402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MESLVVSW_	ENSG00000103742|ENST00000352385|IGDCC4;ENST00000559327.1_1_15:65676349-65688574:-|nuORF;IGDCC4|p.G997Rfs*74|1|0.33|ENSG00000103742|chr15:65386022-65386023|-/CG|frameshift_variant;IGDCC4|p.L859*|1|0.23|ENSG00000103742|chr15:65388940-65388940|G/-|frameshift_variant;IGDCC4|p.T872Qfs*11|3|0.3|ENSG00000103742|chr15:65388902-65388902|G/-|frameshift_variant;nc|ENSG00000103742|Q8TDY8-2|IGDCC4	57.81127852772723	1.7418937515398478	2				NaN	NaN	0	NaN	10833	4370	15201
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15206	39.91	NaN	1096.3	30	0	93.854	0.106	+			17668	IEKLAVEAL	9	52	493.29939649262326	984.5842400520465	2	493.3000793457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IEKLAVEAL_	ENSG00000166165|ENST00000348956|CKB	52.167168403610894	0.27890951017331667	2				NaN	NaN	0	NaN	10834	4370	15201
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15207	39.912	NaN	823.37	30	0	41.827	0.036				-1	SRQRNCFF	8	54	557.7661743164062	NaN	0	557.7661743164062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_SRQRNC(Carbamidomethyl (C))FF_	ENSG00000185338|ENST00000332029|SOCS1;SOCS1|p.L196Sfs*9|1|0.31|ENSG00000185338|chr16:11254893-11254893|G/-|frameshift_variant	35.61828744233558	1.7418937515398478	2				NaN	NaN	0	NaN	10835	4370	15201
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15208	39.913	NaN	1442.6	30	0	216.22	0.146	+			7590	DIQGIEPGTFK	11	40	402.21197509765625	NaN	0	402.21197509765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DIQGIEPGTFK_	ENSG00000176204|ENST00000409884|LRRTM4;LRRTM4|p.K469Rfs*9|1|0.19|ENSG00000176204|chr2:77518463-77518463|T/-|frameshift_variant;nc|ENSG00000176204|Q86VH4-2|LRRTM4	27.64392233501311	0.4422187622456888	2				NaN	NaN	0	NaN	10836	4370	15201
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15213	39.929	NaN	2655.5	30	0	330.07	0.214	+			25563	LPYQVNQM	8	60	496.7469985486458	NaN	0	496.7469177246094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LPYQVNQM_	ENSG00000100393|ENST00000263253|EP300;EP300|p.M1470Cfs*26|1|0.16|ENSG00000100393|chr22:41170521-41170521|A/-|frameshift_variant	50.0245360154114	1.7418937515398478	2				NaN	NaN	0	NaN	10838	4373	15212
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15214	39.933	NaN	2096.9	30	0	251.89	0.106	+			8213	EAEADHLFL	9	60	522.7531849056099	1043.4918168780198	2	522.75439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EAEADHLFL_	ENST00000477118.2_3_1:201762910-201763243:+|nuORF	45.9519527083369	0.35044536499095585	2				NaN	NaN	0	NaN	10839	4373	15212
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15215	39.935	NaN	1466.4	30	0	241.03	0.032				-1	 	0	40	391.7435739253376	781.4725949174752	2	391.74371337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10840	4373	15212
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15224	39.956	NaN	6381.9	30	0	1279.4	0.214	+			26358	LTATVLNVY	9	66	497.284031744324	992.553510555448	2	497.284423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LTATVLNVY_	ENSG00000173080|ENST00000368318|RXFP4	44.116797842482775	0.37197099687881774	2				NaN	NaN	0	NaN	10846	4376	15223
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15225	39.96	NaN	1378	30	0	177.19	0.036	+			47137	VLPYSKPLPS	10	59	550.8214656353526	NaN	0	550.8214111328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VLPYSKPLPS_	ENST00000572173.1_1_16:11389121-11410442:+|nuORF	49.536043120802724	0.30853568297719935	2				NaN	NaN	0	NaN	10847	4376	15223
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15233	39.978	NaN	1562.2	30	0	150.4	0.214	+			46615	VFVDRAACF	9	58	514.2546963485745	1026.494839763949	2	514.2552490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VFVDRAACF_	ENSG00000090054|ENST00000262554|SPTLC1;SPTLC1|p.E218Afs*44|1|0.36|ENSG00000090054|chr9:92059215-92059216|CT/-|frameshift_variant	52.936696900407355	0.27249468807391813	2				NaN	NaN	0	NaN	10852	4379	15232
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15234	39.982	NaN	1440.4	30	0	99.842	0.035			+	11959	FVLFKYYG	8	59	518.7775810937776	NaN	0	518.7769775390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FVLFKYYG_	REV__WDFY4|p.S2492Y|1|0.3|ENSG00000128815|chr10:48900258-48900258|C/A|missense_variant	37.028477286268924	1.7418937515398478	2				NaN	NaN	0	NaN	10853	4379	15232
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15244	40.005	NaN	9783.3	30	0	1496.2	0.143				-1	 	0	65	521.7871782276204	1041.5598035220407	2	521.7879638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10860	4382	15243
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15255	40.032	NaN	3825.6	30	0	745.48	0.214	+			43657	TITGMHSVEV	10	62	537.2682438512837	1072.5219347693674	2	537.2693481445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TITGMHSVEV_	DDX11|p.G621Vfs*32|1|0.1|ENSG00000013573|chr12:31097979-31097979|G/-|frameshift_variant;ENSG00000013573|ENST00000542838|DDX11;ENST00000435753.6_1_12:31242373-31254792:+|nuORF;ENST00000536265.5_1_12:31242773-31256767:+|nuORF;ENST00000539049.5_1_12:31242373-31253526:+|nuORF;ENST00000539757.1_1_12:9440801-9462940:+|nuORF;ENST00000543026.5_1_12:31242773-31246356:+|nuORF;nc|ENSG00000013573|Q96FC9-3|DDX11;nc|ENSG00000013573|Q96FC9-4|DDX11;nc|ENSG00000013573|Q96FC9|DDX11;nc|ENSG00000256263|A8MPP1|DDX11L8	34.172542307311794	0.6007644933930345	2				NaN	NaN	0	NaN	10868	4385	15254
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15256	40.036	NaN	2654.2	30	0	487.88	0.106	+			42936	TEIPTKITI	9	59	508.30504509669106	1014.5955372601821	2	508.3057556152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEIPTKITI_	ENSG00000123104|ENST00000381340|ITPR2;ITPR2|p.K1802Sfs*13|2|0.65|ENSG00000123104|chr12:26487217-26487217|T/-|frameshift_variant;ITPR2|p.L1313Ffs*10|1|0.43|ENSG00000123104|chr12:26599208-26599209|-/A|frameshift_variant;ITPR2|p.N1390Mfs*17|1|0.07|ENSG00000123104|chr12:26596973-26596973|C/-|frameshift_variant;ITPR2|p.N858Kfs*2|1|0.38|ENSG00000123104|chr12:26655723-26655724|-/T|frameshift_variant;ITPR2|p.R1837Gfs*7|1|0.09|ENSG00000123104|chr12:26487113-26487113|T/-|frameshift_variant;ITPR2|p.R1837Kfs*4|1|0.24|ENSG00000123104|chr12:26487112-26487113|-/T|frameshift_variant	62.107414245175825	0.1960472003779324	2				NaN	NaN	0	NaN	10869	4385	15254
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15257	40.038	NaN	3308.5	30	0	492.89	0.106	+			44362	TSIYKTPNP	9	68	510.77261069042964	NaN	0	510.7726135253906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TSIYKTPNP_	ENSG00000134897|ENST00000257336|BIVM	64.20726635412375	0.13137488984569443	2				NaN	NaN	0	NaN	10870	4385	15254
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15258	40.04	NaN	1159	30	0	168.12	0.106	+			29147	NVATTLPSY	9	49	483.2508239746094	NaN	0	483.2508239746094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NVATTLPSY_	ENSG00000131507|ENST00000253814|NDFIP1	45.97224482568171	0.23445038899310136	2				NaN	NaN	0	NaN	10871	4385	15254
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15259	40.042	NaN	1201.4	30	0	185.85	0.106	+			9700	EMGKPFGFCK	10	49	572.2689069469571	1142.5232609607142	2	572.2701416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EMGKPFGFCK_	tr|U7SKJ1|U7SKJ1_FUSNUDUF4418domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02008PE=4SV=1	25.125986553469783	0.6746423231557295	2				NaN	NaN	0	NaN	10872	4385	15254
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15260	40.043	NaN	6659.5	30	0	695.61	0.035				-1	 	0	71	490.2942044862194	978.5738560392389	2	490.2948303222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10873	4385	15254
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15270	40.065	NaN	3197.5	30	0	416.62	0.215			+	38651	SSIFAALAALG	11	64	510.7894181662367	1019.5642833992734	2	510.7723693847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSIFAALAALG_	REV__ENSG00000112992|ENST00000344920|NNT	45.02220120713402	0.4892240028381124	2				NaN	NaN	0	NaN	10880	4388	15269
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15271	40.069	NaN	1069.9	30	0	159.69	0.106	+			20779	KHVRSRPGA	9	55	504.2969055175781	NaN	0	504.2969055175781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KHVRSRPGA_	ENST00000373425.7_1_9:129871009-129884789:-|nuORF	35.61828744233558	0.29773779453147337	2				NaN	NaN	0	NaN	10881	4388	15269
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15272	40.071	NaN	1231.2	30	0	226.22	0.036	+			43721	TKSTTIRFT	9	61	527.799457337221	1053.584361741242	2	527.8007202148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TKSTTIRFT_	SDK2|p.N804K|1|0.24|ENSG00000069188|chr17:73414716-73414716|A/C|missense_variant	28.081489160057373	0.5408112046645406	2				NaN	NaN	0	NaN	10882	4388	15269
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15282	40.094	NaN	7675.8	30	0	838.13	0.214	+			28852	NPVELKALY	9	72	523.7971814450128	1045.5798099568256	2	523.7979125976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NPVELKALY_	DST|p.K5076Nfs*24|1|0.31|ENSG00000151914|chr6:56472218-56472218|T/-|frameshift_variant;DST|p.L1539Ffs*11|1|0.39|ENSG00000151914|chr6:56611525-56611526|-/A|frameshift_variant;DST|p.N1220Tfs*9|1|0.23|ENSG00000151914|chr6:56630354-56630354|T/-|frameshift_variant;DST|p.T4428Nfs*23|1|0.12|ENSG00000151914|chr6:56497896-56497897|-/T|frameshift_variant;ENSG00000127603|ENST00000564288|MACF1;ENSG00000151914|ENST00000680361|DST;ENST00000521104.1_1_6:56504020-56557947:-|nuORF;ENST00000523967.5_1_6:56504020-56716372:-|nuORF;MACF1|p.A5223Lfs*8|1|0.21|ENSG00000127603|chr1:39388486-39388486|G/-|frameshift_variant;MACF1|p.N4824Kfs*19|1|0.33|ENSG00000127603|chr1:39387292-39387293|-/A|frameshift_variant;MACF1|p.P924Hfs*52|1|0.23|ENSG00000127603|chr1:39303040-39303040|C/-|frameshift_variant;MACF1|p.S2157Ffs*3|1|0.37|ENSG00000127603|chr1:39333036-39333037|-/T|frameshift_variant;MACF1|p.T4896Lfs*29|1|0.27|ENSG00000127603|chr1:39387507-39387507|A/-|frameshift_variant;nc|ENSG00000127603|Q9UPN3-2|MACF1;nc|ENSG00000127603|Q9UPN3-3|MACF1;nc|ENSG00000127603|Q9UPN3-4|MACF1;nc|ENSG00000127603|Q9UPN3|MACF1;nc|ENSG00000151914|Q03001-13|DST;nc|ENSG00000151914|Q03001-14|DST;nc|ENSG00000151914|Q03001|DST	120.8684288430529	0.02067403653475984	2				NaN	NaN	0	NaN	10889	4391	15281
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15283	40.098	NaN	9734.6	30	0	1745	0.106	+			38746	SSLPTQLFK	9	63	510.7894181662367	1019.5642833992734	2	510.7904357910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSLPTQLFK_	ENSG00000017427|ENST00000337514|IGF1;nc|ENSG00000017427|P05019-4|IGF1;nc|ENSG00000017427|P05019|IGF1	65.15724298150197	0.17062369902793603	2				NaN	NaN	0	NaN	10890	4391	15281
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15284	40.1	NaN	5309.8	30	0	849.09	0.033				-1	 	0	55	446.2318320267806	890.4491111203612	2	446.2308349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10891	4391	15281
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15295	40.125	NaN	1174.2	30	0	181.72	0.214	+			30212	PSRPEVPN	8	46	448.2371585018151	NaN	0	448.23724365234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PSRPEVPN_	ENSG00000069345|ENST00000317089|DNAJA2	35.61828744233558	1.7418937515398478	2				NaN	NaN	0	NaN	10899	4394	15294
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15296	40.128	NaN	1464.3	30	0	105.99	0.034	+			42273	TACQVATAF	9	49	456.21759033203125	NaN	0	456.21759033203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TACQVATAF_	ENSG00000169093|ENST00000381317|ASMTL;nc|ENSG00000292339|O95671-2|ASMTL;nc|ENSG00000292339|O95671-3|ASMTL	56.72105179125745	0.16330365735109603	2				NaN	NaN	0	NaN	10900	4394	15294
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15312	40.171	NaN	1694.2	30	0	170.61	0.141	+			6536	AYGFVARI	8	54	448.75265322355386	895.4907535139077	2	448.7518005371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AYGFVARI_	ENSG00000110799|ENST00000261405|VWF;ENST00000321023.5_1_12:6204574-6232125:-|nuORF;nc|ENSG00000110799|P04275-2|VWF;VWF|p.D1472Tfs*53|1|0.21|ENSG00000110799|chr12:6019004-6019004|C/-|frameshift_variant	62.97842346883844	0.4722955155785405	2				NaN	NaN	0	NaN	10910	4400	15311
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15319	40.191	NaN	1639	30	0	277.63	0.214			+	29902	PLPKWYII	8	51	515.309612372682	1028.6046718121638	2	515.3096923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PLPKWYII_	REV__ENSG00000113594|ENST00000453190|LIFR;REV__ENST00000503088.1_1_5:38490841-38530749:-|nuORF;REV__LIFR|p.F700Sfs*16|1|0.11|ENSG00000113594|chr5:38490258-38490258|A/-|frameshift_variant;REV__LIFR|p.N551H|1|0.06|ENSG00000113594|chr5:38499533-38499533|T/G|missense_variant	38.80614096846853	0.6637206697844082	2				NaN	NaN	0	NaN	10914	4403	15318
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15320	40.195	NaN	1279.1	30	0	234.73	0.106			+	-1	NKPVYSPMD	9	54	533.7465585654943	1065.4785641977885	2	533.7473754882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_NKPVYSPM(Oxidation (M))D_	REV__CHD7|p.D2988Mfs*3|5|0.36|ENSG00000171316|chr8:60865895-60865895|G/-|frameshift_variant;REV__ENSG00000171316|ENST00000423902|CHD7	39.252832667884924	0.4290233611298554	2				NaN	NaN	0	NaN	10915	4403	15318
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15321	40.197	NaN	1037.7	30	0	80.746	0.035			+	46341	VEKMNIFL	8	59	497.2747497558594	NaN	0	497.2747497558594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VEKMNIFL_	REV__tr|U7T2G6|U7T2G6_FUSNUDUF304domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00444PE=4SV=1	47.657333605630114	1.7418937515398478	2				NaN	NaN	0	NaN	10916	4403	15318
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15328	40.215	NaN	2968	30	0	774.52	0.214				-1	DPQKALCDL	9	58	530.2602855483408	1058.5060181634815	2	530.2619018554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_DPQKALC(Carbamidomethyl (C))DL_	ENSG00000183246|ENST00000433039|RIMBP3C;ENSG00000274600|ENST00000620804|RIMBP3B;ENSG00000275793|ENST00000619918|RIMBP3;RIMBP3B|p.G1589Afs*9|1|0.16|ENSG00000274600|chr22:21388619-21388619|G/-|frameshift_variant	28.081489160057373	0.5408112046645406	2				NaN	NaN	0	NaN	10920	4406	15327
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15329	40.218	NaN	2775.8	30	0	578.69	0.106	+			26939	LYGKIAEAF	9	63	506.2789413960486	1010.5433298588972	2	506.2782897949219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LYGKIAEAF_	ENSG00000123159|ENST00000393033|GIPC1;ENST00000587811.1_1_19:14593203-14593794:-|nuORF;GIPC1|p.G115Afs*13|1|0.3|ENSG00000123159|chr19:14480723-14480723|C/-|frameshift_variant;GIPC1|p.R91H|1|0.19|ENSG00000123159|chr19:14482705-14482705|C/T|missense_variant	79.71258880314673	0.09879134589249085	2				NaN	NaN	0	NaN	10921	4406	15327
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15330	40.22	NaN	2256.5	30	0	381.06	0.106	+			11763	FSKIGGIL	8	55	417.75752360250533	833.5004942718107	2	417.7579650878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FSKIGGIL_	ENSG00000140575|ENST00000268182|IQGAP1;ENSG00000145703|ENST00000274364|IQGAP2;ENSG00000183856|ENST00000361170|IQGAP3;IQGAP1|p.N941Ifs*8|1|0.43|ENSG00000140575|chr15:90476693-90476693|A/-|frameshift_variant;IQGAP1|p.S1529Afs*10|1|0.15|ENSG00000140575|chr15:90492665-90492665|A/-|frameshift_variant;IQGAP2|p.K608Nfs*42|1|0.36|ENSG00000145703|chr5:76637072-76637072|A/-|frameshift_variant;IQGAP2|p.Q1499Rfs*15|1|0.05|ENSG00000145703|chr5:76701201-76701202|-/CCGAG|frameshift_variant;IQGAP2|p.T881Hfs*2|2|0.3|ENSG00000145703|chr5:76665133-76665133|A/-|frameshift_variant;IQGAP3|p.Q1205Sfs*31|1|0.4|ENSG00000183856|chr1:156534628-156534628|G/-|frameshift_variant;REV__ENSG00000134452|ENST00000362091|FBH1;REV__ENST00000475867.5_1_10:5963439-5965826:+|nuORF;REV__nc|ENSG00000134452|Q8NFZ0-2|FBH1	39.252832667884924	0.6609488554722044	2				NaN	NaN	0	NaN	10922	4406	15327
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15331	40.222	NaN	2084.1	30	0	139.03	0.044	+			33383	RHWTHRRVFYF	11	73	535.6160317777602	1603.8262659334805	3	535.6175537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RHWTHRRVFYF_	ENST00000296575.7_1_4:145567307-145567847:+|nuORF	3.211326085083802	0.8683767028876275	2				NaN	NaN	0	NaN	10923	4406	15327
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15336	40.237	NaN	1691.7	30	0	149.28	0.142			+	43103	TERALALAV	9	60	472.2820673009414	942.5495816686828	2	472.2812805175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TERALALAV_	REV__ENSG00000135222|ENST00000353151|CSN2	47.657333605630114	0.33044192980041115	2				NaN	NaN	0	NaN	10925	4409	15335
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15344	40.259	NaN	2146.4	30	0	379.31	0.214	+			38557	SSFGEFLSK	9	58	501.2503049567636	1000.4860569803272	2	501.25048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSFGEFLSK_	nc|ENSG00000075790|Q9UHQ4-2|BCAP29	41.42661286455405	0.403525789677298	2				NaN	NaN	0	NaN	10930	4412	15343
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15345	40.262	NaN	1005	30	0	106.11	0.106	+			9772	ENNPLGSL	8	46	422.2160983620365	NaN	0	422.2164611816406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ENNPLGSL_	ENSG00000113211|ENST00000231136|PCDHB6	44.116797842482775	1.7418937515398478	2				NaN	NaN	0	NaN	10931	4412	15343
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15346	40.264	NaN	1420.3	30	0	181.63	0.037	+			43591	TIIDTKGVTAL	11	51	566.3341788846382	1130.6538048360762	2	566.3361206054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TIIDTKGVTAL_	ENSG00000137054|ENST00000377798|POLR1E;ENST00000442009.6_1_9:37489340-37503196:+|nuORF;nc|ENSG00000137054|Q9GZS1-1|POLR1E	51.72707519102574	0.3974808554116684	2				NaN	NaN	0	NaN	10932	4412	15343
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15352	40.28	NaN	2009.7	30	0	135.78	0.214	+			9684	ELVTVIGAI	9	56	457.7810601254014	913.5475673176028	2	457.7814025878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ELVTVIGAI_	ENSG00000165125|ENST00000359396|TRPV6;nc|ENSG00000165125|Q9H1D0-2|TRPV6	34.172542307311794	0.4838870758800184	2				NaN	NaN	0	NaN	10935	4415	15351
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15353	40.284	NaN	2836	30	0	363.11	0.035	+			4084	ATDLTFLEK	9	59	519.2793868561973	1036.5442207791946	2	519.279541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATDLTFLEK_	ENSG00000197879|ENST00000648651|MYO1C;ENST00000573961.1_1_17:1380797-1381223:-|nuORF;nc|ENSG00000197879|O00159-2|MYO1C;nc|ENSG00000197879|O00159-3|MYO1C	88.17693792209575	0.07000514020414955	2				NaN	NaN	0	NaN	10936	4415	15351
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15359	40.3	NaN	1171.2	30	0	88.865	0.145			+	-1	QRVMMVLFEE	10	47	649.3154296875	NaN	0	649.3154296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_QRVM(Oxidation (M))MVLFEE_	REV__ENSG00000101470|ENST00000372555|TNNC2	21.9598887501803	0.4201028297492154	2				NaN	NaN	0	NaN	10939	4418	15358
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15366	40.32	NaN	558.07	30	0	45.38	0.214			+	48769	VTWSPNGL	8	38	437.22680131255856	NaN	0	437.2267761230469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTWSPNGL_	REV__ENSG00000144840|ENST00000273375|RABL3	38.80614096846853	1.7418937515398478	2				NaN	NaN	0	NaN	10943	4421	15365
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15367	40.324	NaN	2887.6	30	0	700.23	0.106	+			18877	IVGTVLIIK	9	53	478.3308485365862	954.6471441399724	2	478.33123779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IVGTVLIIK_	ENSG00000231389|ENST00000419277|HLA-DPA1	58.78195531508484	0.22376836668196862	2				NaN	NaN	0	NaN	10944	4421	15365
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15368	40.326	NaN	1671	30	0	250.53	0.106	+			18203	IMTGSYNNF	9	59	523.7333289376442	1045.4521049420882	2	523.7344970703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IMTGSYNNF_	ENSG00000156475|ENST00000394411|PPP2R2B;ENSG00000175470|ENST00000455566|PPP2R2D;ENST00000490777.2_10:133754324-133769464:+|nuORF;nc|ENSG00000156475|Q00005-2|PPP2R2B;nc|ENSG00000156475|Q00005-3|PPP2R2B;nc|ENSG00000156475|Q00005-4|PPP2R2B;nc|ENSG00000156475|Q00005-5|PPP2R2B;nc|ENSG00000156475|Q00005-6|PPP2R2B;nc|ENSG00000156475|Q00005-7|PPP2R2B;PPP2R2B|p.G397Afs*31|1|0.1|ENSG00000156475|chr5:146590089-146590089|C/-|frameshift_variant	62.107414245175825	0.1960472003779324	2				NaN	NaN	0	NaN	10945	4421	15365
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15369	40.327	NaN	1053.4	30	0	157.87	0.106	+			47014	VKYLGLSAV	9	45	475.28918721097534	NaN	0	475.2892761230469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VKYLGLSAV_	PCYOX1|p.D105Y|1|0.44|ENSG00000116005|chr2:70259560-70259560|G/T|missense_variant	35.61828744233558	0.29773779453147337	2				NaN	NaN	0	NaN	10946	4421	15365
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15370	40.329	NaN	1482.1	30	0	197.69	0.036			+	50098	WGQPFPLPSA	10	50	550.2811889648438	NaN	0	550.2811889648438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_WGQPFPLPSA_	REV__nc|ENSG00000258436|Q7Z5J4-2|RAI1	26.69291269510374	0.4125295221340092	2				NaN	NaN	0	NaN	10947	4421	15365
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15378	40.347	NaN	1681.1	30	0	268.74	0.144				-1	RKLPGKRGM	9	57	550.8213500976562	NaN	0	550.8213500976562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))RKLPGKRGM(Oxidation (M))_	ENST00000327158.4_1_17:904961-904997:+|nuORF	30.503639358989545	0.3235605894931338	2				NaN	NaN	0	NaN	10952	4424	15377
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15388	40.373	NaN	4310.5	30	0	701.74	0.214				-1	 	0	67	483.2681857363838	964.5218185395677	2	483.2742919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10959	4427	15387
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15389	40.377	NaN	3098.8	30	0	352.62	0.032	+			45387	TVTLTVAV	8	51	402.2468119184903	802.4790709037807	2	402.24725341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVTLTVAV_	ENSG00000081853|ENST00000394576|PCDHGA2;ENSG00000204956|ENST00000517417|PCDHGA1;ENSG00000253159|ENST00000252085|PCDHGA12;ENSG00000253537|ENST00000518325|PCDHGA7;ENSG00000253731|ENST00000517434|PCDHGA6;ENSG00000253767|ENST00000398604|PCDHGA8;ENSG00000253846|ENST00000398610|PCDHGA10;ENSG00000253873|ENST00000398587|PCDHGA11;ENSG00000254245|ENST00000253812|PCDHGA3;ENSG00000262576|ENST00000571252|PCDHGA4;nc|ENSG00000081853|Q9Y5H1-2|PCDHGA2;nc|ENSG00000204956|Q9Y5H4-2|PCDHGA1;nc|ENSG00000253159|O60330-2|PCDHGA12;nc|ENSG00000253537|Q9Y5G6-2|PCDHGA7;nc|ENSG00000253731|Q9Y5G7-2|PCDHGA6;nc|ENSG00000253767|Q9Y5G5-2|PCDHGA8;nc|ENSG00000253846|Q9Y5H3-2|PCDHGA10;nc|ENSG00000253873|Q9Y5H2-2|PCDHGA11;nc|ENSG00000254245|Q9Y5H0-2|PCDHGA3;nc|ENSG00000262576|Q9Y5G9-2|PCDHGA4;PCDHGA1|p.Q772Sfs*79|1|0.05|ENSG00000204956|chr5:141332994-141332994|C/-|frameshift_variant;PCDHGA10|p.S671I|1|0.3|ENSG00000253846|chr5:141415187-141415187|G/T|missense_variant;PCDHGA11|p.R724Afs*19|1|0.34|ENSG00000253873|chr5:141423397-141423397|C/-|frameshift_variant;PCDHGA2|p.A656T|1|0.24|ENSG00000081853|chr5:141340937-141340937|G/A|missense_variant;PCDHGA2|p.K788Rfs*64|1|0.06|ENSG00000081853|chr5:141341330-141341330|A/-|frameshift_variant;PCDHGA6|p.F770Sfs*23|1|0.29|ENSG00000253731|chr5:141376389-141376389|T/-|frameshift_variant;PCDHGA7|p.V757Sfs*12|1|0.31|ENSG00000253537|chr5:141385167-141385167|G/-|frameshift_variant;PCDHGA8|p.L712Sfs*33|1|0.15|ENSG00000253767|chr5:141394944-141394945|-/T|frameshift_variant;PCDHGA8|p.N788Kfs*2|1|0.27|ENSG00000253767|chr5:141395171-141395172|-/A|frameshift_variant	68.484700416344	0.4195245774506064	2				NaN	NaN	0	NaN	10960	4427	15387
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15399	40.398	NaN	8425.4	30	0	813.45	0.144	+			28038	NAAKVFNLY	9	77	520.2818944362824	1038.5492359393647	2	520.2824096679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAAKVFNLY_	ENSG00000092964|ENST00000521913|DPYSL2;nc|ENSG00000092964|Q16555-2|DPYSL2;nc|ENSG00000092964|Q16555|DPYSL2	120.8684288430529	0.02067403653475984	2				NaN	NaN	0	NaN	10967	4430	15398
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15404	40.415	NaN	5040.3	30	0	936.82	0.214	+			35912	SEFPIRTL	8	65	481.76850357973245	961.5224542262649	2	481.76849365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEFPIRTL_	CKAP5|p.V1971Lfs*42|1|0.03|ENSG00000175216|chr11:46744211-46744212|-/TTGAAAAAAAG|frameshift_variant;ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5	87.69643885390035	0.28444366722805053	2				NaN	NaN	0	NaN	10969	4433	15403
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15405	40.418	NaN	3810.1	30	0	640.34	0.035				-1	 	0	65	496.79178840657306	991.5690238799461	2	496.7923278808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10970	4433	15403
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15413	40.438	NaN	7049.6	30	0	1332.7	0.214				-1	 	0	50	446.2316965585543	890.4488401839086	2	446.23199462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10975	4436	15412
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15414	40.442	NaN	4852.7	30	0	1064.6	0.106	+			31787	QPLKLDTSF	9	69	524.7866945548616	1047.558836176523	2	524.787841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QPLKLDTSF_	ENSG00000126581|ENST00000590099|BECN1;ENST00000591307.5_1_17:40972740-40975895:-|nuORF	56.72105179125745	0.24094814563026265	2				NaN	NaN	0	NaN	10976	4436	15412
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15415	40.444	NaN	1789	30	0	351.61	0.106	+			6499	AWRRALPL	8	55	491.79943119153734	981.5843094498747	2	491.7999572753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AWRRALPL_	nc|ENSG00000013573|Q96FC9|DDX11	28.2542754592877	0.7411748056684583	2				NaN	NaN	0	NaN	10977	4436	15412
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15416	40.446	NaN	1595.2	30	0	173.56	0.034			+	8932	EEVVQKLQ	8	59	486.77109389557313	971.5276348579463	2	486.77154541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EEVVQKLQ_	REV__ENSG00000034152|ENST00000342679|MAP2K3;REV__ENSG00000108984|ENST00000590474|MAP2K6;REV__ENST00000477540.1_1_17:21215348-21217539:+|nuORF;REV__MAP2K3|p.Q288Sfs*19|1|0.24|ENSG00000034152|chr17:21312224-21312224|C/-|frameshift_variant;REV__nc|ENSG00000034152|P46734-2|MAP2K3;REV__nc|ENSG00000034152|P46734-3|MAP2K3;REV__nc|ENSG00000108984|P52564-2|MAP2K6	60.97194046774394	0.49215940876911696	2				NaN	NaN	0	NaN	10978	4436	15412
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15427	40.469	NaN	4064.3	30	0	568.52	0.214	+			41217	SVLENFVGR	9	64	510.77665489768594	1019.5387568621719	2	511.2782897949219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVLENFVGR_	DNM2|p.L793*|2|0.27|ENSG00000079805|chr19:10830206-10830206|C/-|frameshift_variant;DNM2|p.L793Pfs*31|1|0.35|ENSG00000079805|chr19:10830205-10830206|-/C|frameshift_variant;ENSG00000079805|ENST00000389253|DNM2;ENSG00000106976|ENST00000372923|DNM1;ENSG00000197959|ENST00000627582|DNM3;nc|ENSG00000079805|P50570-2|DNM2;nc|ENSG00000079805|P50570-3|DNM2;nc|ENSG00000079805|P50570-5|DNM2;nc|ENSG00000079805|P50570|DNM2;nc|ENSG00000106976|Q05193-2|DNM1;nc|ENSG00000106976|Q05193-3|DNM1;nc|ENSG00000106976|Q05193-5|DNM1;nc|ENSG00000197959|Q9UQ16-2|DNM3;nc|ENSG00000197959|Q9UQ16-4|DNM3;nc|ENSG00000197959|Q9UQ16-5|DNM3;nc|ENSG00000197959|Q9UQ16|DNM3	106.68306549817024	0.032382560583716295	2				NaN	NaN	0	NaN	10986	4439	15426
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15428	40.473	NaN	2617.9	30	0	502.16	0.036			+	-1	MDVVVMTAVL	10	51	547.2865912834038	1092.5586296336076	2	547.2876586914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_MDVVVM(Oxidation (M))TAVL_	REV__ENST00000444886.1_1_9:128358610-128358904:+|nuORF	40.77816245573522	0.5419747034533848	2				NaN	NaN	0	NaN	10987	4439	15426
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15436	40.493	NaN	32273	30	0	6082.3	0.214				-1	 	0	78	483.2681857363838	964.5218185395677	2	483.2685852050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10992	4442	15435
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15437	40.496	NaN	3363.6	30	0	389.88	0.106				-1	LEEMRVTY	8	63	528.7542384477634	1055.4939239623268	2	528.7550659179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LEEM(Oxidation (M))RVTY_	AKAP9|p.L1203Yfs*16|1|0.24|ENSG00000127914|chr7:92014319-92014319|T/-|frameshift_variant;AKAP9|p.Q3083Nfs*28|1|0.15|ENSG00000127914|chr7:92089389-92089390|-/TGAATATCAAGCAGCTATGGAATGCC|frameshift_variant;AKAP9|p.T1942Lfs*3|3|0.18|ENSG00000127914|chr7:92062328-92062328|A/-|frameshift_variant;ENSG00000127914|ENST00000356239|AKAP9;ENST00000493453.1_1_7:91570251-91670224:+|nuORF;nc|ENSG00000127914|Q99996-1|AKAP9;nc|ENSG00000127914|Q99996-3|AKAP9;nc|ENSG00000127914|Q99996-4|AKAP9;nc|ENSG00000127914|Q99996-5|AKAP9;nc|ENSG00000127914|Q99996-6|AKAP9	66.42927471994793	0.4381325844043345	2				NaN	NaN	0	NaN	10993	4442	15435
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15438	40.498	NaN	3133.4	30	0	920.02	0.106	+			44169	TQSEISTSLP	10	56	531.770070454306	1061.525587975412	2	531.7722778320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TQSEISTSLP_	ENSG00000163935|ENST00000394752|SFMBT1;nc|ENSG00000163935|Q9UHJ3-2|SFMBT1	52.936696900407355	0.4300801048568001	2				NaN	NaN	0	NaN	10994	4442	15435
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15439	40.5	NaN	1200.7	30	0	137.77	0.106	+			5736	AVFSYLTGK	9	56	493.27021808738215	984.5258832415643	2	493.2713623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVFSYLTGK_	ENSG00000110713|ENST00000324932|NUP98;nc|ENSG00000110713|P52948-2|NUP98;nc|ENSG00000110713|P52948-6|NUP98;nc|ENSG00000110713|P52948|NUP98	44.377184641726394	0.36891676396732553	2				NaN	NaN	0	NaN	10995	4442	15435
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15440	40.502	NaN	1518.2	30	0	124.59	0.034			+	46050	VCFMSNTI	8	51	457.7084045410156	NaN	0	457.7084045410156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VCFMSNTI_	REV__ENSG00000010438|ENST00000379405|PRSS3;REV__nc|ENSG00000010438|P35030-2|PRSS3;REV__nc|ENSG00000010438|P35030-4|PRSS3;REV__nc|ENSG00000010438|P35030-5|PRSS3;REV__nc|ENSG00000010438|P35030|PRSS3	35.61828744233558	1.7418937515398478	2				NaN	NaN	0	NaN	10996	4442	15435
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15451	40.527	NaN	1902.4	30	0	327.8	0.214	+			47125	VLPANSVTF	9	52	474.2631078887365	946.511662844273	2	474.26300048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VLPANSVTF_	ENSG00000074527|ENST00000343702|NTN4;nc|ENSG00000074527|Q9HB63-2|NTN4;nc|ENSG00000074527|Q9HB63-3|NTN4	37.81151784470057	0.4459294069877048	2				NaN	NaN	0	NaN	11004	4445	15450
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15452	40.531	NaN	1740.6	30	0	251.98	0.106				-1	 	0	52	466.74498769773237	931.4754224622648	2	466.7459716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11005	4445	15450
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15453	40.533	NaN	1327.8	30	0	109.99	0.034	+			25639	LQSGIVLLQ	9	57	485.7994855646452	969.5844181960904	2	485.8000793457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LQSGIVLLQ_	ENSG00000012983|ENST00000682126|MAP4K5;ENST00000554990.5_1_14:50886739-50915587:-|nuORF	26.69291269510374	0.5537881896960711	2				NaN	NaN	0	NaN	11006	4445	15450
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15461	40.552	NaN	12787	30	0	3650.8	0.214				-1	 	0	61	452.76160038738146	903.508647841563	2	452.761962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11011	4448	15460
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15462	40.556	NaN	1286	30	0	150.16	0.106			+	-1	WVAWFKSIY	9	57	621.3239184870602	1240.6332840409202	2	621.32470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))WVAWFKSIY_	REV__ENST00000312938.4_1_3:101369888-101369975:-|nuORF	39.252832667884924	0.4290233611298554	2				NaN	NaN	0	NaN	11012	4448	15460
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15463	40.558	NaN	1302.4	30	0	290.49	0.106	+			31634	QMLHPILR	8	50	504.29628604173234	NaN	0	504.29351806640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QMLHPILR_	ERP44|p.F68Lfs*18|1|0.17|ENSG00000023318|chr9:100052499-100052499|A/-|frameshift_variant	38.80614096846853	1.7418937515398478	2				NaN	NaN	0	NaN	11013	4448	15460
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15464	40.56	NaN	841.46	30	0	52.566	0.035				-1	RTCGLPYI	8	49	490.25650257428293	NaN	0	490.25531005859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_RTC(Carbamidomethyl (C))GLPYI_	ENSG00000173064|ENST00000682272|HECTD4;ENST00000547085.1_1_12:112600816-112607652:-|nuORF;HECTD4|p.A4187Pfs*44|1|0.07|ENSG00000173064|chr12:112163201-112163201|C/-|frameshift_variant;nc|ENSG00000173064|Q9Y4D8-4|HECTD4;nc|ENSG00000173064|Q9Y4D8|HECTD4	33.51558372728122	1.7418937515398478	2				NaN	NaN	0	NaN	11014	4448	15460
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15471	40.578	NaN	2231.9	30	0	536.19	0.214	+			49447	VVVPANTT	8	47	400.728891264324	799.443229595448	2	400.7293395996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVVPANTT_	ENSG00000198910|ENST00000370060|L1CAM;nc|ENSG00000198910|P32004-2|L1CAM;nc|ENSG00000198910|P32004-3|L1CAM	40.5726180659479	0.6527593143185008	2				NaN	NaN	0	NaN	11018	4451	15470
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15472	40.581	NaN	1578.7	30	0	315.96	0.106	+			28978	NSIGPVNAI	9	46	442.744873046875	NaN	0	442.744873046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NSIGPVNAI_	ENSG00000113327|ENST00000639213|GABRG2;GABRG2|p.A158Lfs*13|1|0.15|ENSG00000113327|chr5:162097776-162097776|A/-|frameshift_variant;nc|ENSG00000113327|P18507-1|GABRG2;nc|ENSG00000113327|P18507-3|GABRG2	42.396135135203025	0.2590952873412954	2				NaN	NaN	0	NaN	11019	4451	15470
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15473	40.583	NaN	1954.7	30	0	209.24	0.106			+	21797	KQWFDMSF	8	61	544.7479109187444	1087.4812689042888	2	544.7491455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KQWFDMSF_	REV__ENSG00000074266|ENST00000263360|EED;REV__ENST00000525244.5_1_11:85956313-85988207:+|nuORF;REV__nc|ENSG00000074266|O75530-2|EED;REV__nc|ENSG00000074266|O75530-3|EED	52.29916861842294	0.578018602984656	2				NaN	NaN	0	NaN	11020	4451	15470
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15474	40.585	NaN	2393.2	30	0	150.24	0.106			+	12030	FYFVRRHTWHR	11	67	535.6160317777602	1603.8262659334805	3	535.61669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FYFVRRHTWHR_	REV__ENST00000296575.7_1_4:145567307-145567847:+|nuORF	1.5229847967890655	0.8889384911710808	2				NaN	NaN	0	NaN	11021	4451	15470
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15475	40.587	NaN	2181.5	30	0	318.31	0.106	+			41220	SVLEQSFLR	9	62	539.7987100502147	NaN	0	539.7990112304688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVLEQSFLR_	ENSG00000085840|ENST00000371568|ORC1;ORC1|p.N769K|1|0.24|ENSG00000085840|chr1:52374894-52374894|A/C|missense_variant	81.52500206392136	0.06615817976141032	2				NaN	NaN	0	NaN	11022	4451	15470
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15476	40.589	NaN	1731.4	30	0	180.66	0.106	+			27172	MDIVVHTL	8	52	464.2519178695462	926.4892828058925	2	464.2523193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MDIVVHTL_	ENSG00000151502|ENST00000281187|VPS26B;ENST00000527586.1_1_11:134109936-134113358:+|nuORF;VPS26B|p.E144K|1|0.33|ENSG00000151502|chr11:134240040-134240040|G/A|missense_variant	79.45101966838831	0.3281480470254892	2				NaN	NaN	0	NaN	11023	4451	15470
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15477	40.59	NaN	1130.2	30	0	108.54	0.035				-1	FGGFCVLTI	9	52	507.26011787416405	NaN	0	507.26165771484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_FGGFC(Carbamidomethyl (C))VLTI_	ENST00000508761.1_1_5:11903293-11903473:-|nuORF	31.954861631926434	0.3162336699109506	2				NaN	NaN	0	NaN	11024	4451	15470
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15486	40.612	NaN	1008.3	30	0	202.57	0.214			+	43685	TKFMVFAY	8	54	503.75797931060623	1005.5014056880125	2	503.7582092285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TKFMVFAY_	REV__ENSG00000183808|ENST00000520560|RBM12B;REV__RBM12B|p.E570Gfs*14|1|0.25|ENSG00000183808|chr8:93734704-93734705|-/G|frameshift_variant	26.79610172149135	0.7524337208463756	2				NaN	NaN	0	NaN	11030	4454	15485
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15487	40.616	NaN	1034	30	0	61.222	0.035	+			2238	ALSSQKREV	9	54	509.28668212890625	NaN	0	509.28668212890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ALSSQKREV_	ENSG00000170145|ENST00000304987|SIK2;SIK2|p.P829Lfs*49|1|0.43|ENSG00000170145|chr11:111723830-111723830|C/-|frameshift_variant	33.921630207806714	0.3063038642147651	2				NaN	NaN	0	NaN	11031	4454	15485
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15494	40.633	NaN	2251.2	30	0	424.21	0.214			+	48295	VTEGFKYL	8	58	478.75759443207943	955.5006359309589	2	479.2598571777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTEGFKYL_	REV__ENSG00000117543|ENST00000370109|DPH5;REV__ENST00000481871.5_1_1:101455997-101490867:-|nuORF;REV__nc|ENSG00000117543|Q9H2P9-5|DPH5;REV__nc|ENSG00000117543|Q9H2P9-6|DPH5	42.396135135203025	0.6414440140393314	2				NaN	NaN	0	NaN	11035	4457	15493
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15495	40.637	NaN	2324.2	30	0	246.71	0.034	+			27167	MDFTAARL	8	53	462.7334962747101	923.4524396162202	2	463.2356262207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MDFTAARL_	ENSG00000102580|ENST00000602402|DNAJC3	87.69643885390035	0.28444366722805053	2				NaN	NaN	0	NaN	11036	4457	15493
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15504	40.657	NaN	1318.3	30	0	181.59	0.214	+			27047	MAAMPQTVY	9	53	506.23504721785605	NaN	0	506.235107421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MAAMPQTVY_	ENSG00000084070|ENST00000372718|SMAP2;nc|ENSG00000084070|Q8WU79-2|SMAP2;nc|ENSG00000084070|Q8WU79-3|SMAP2	37.81151784470057	0.28666463014928195	2				NaN	NaN	0	NaN	11042	4460	15503
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15505	40.661	NaN	1349.9	30	0	154.66	0.106	+			6085	AVNFLLTAK	9	55	488.79428335649396	975.574013779788	2	488.7950744628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVNFLLTAK_	nc|ENSG00000211829|B7Z8K6|TRDC	45.02220120713402	0.3613509778819777	2				NaN	NaN	0	NaN	11043	4460	15503
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15506	40.663	NaN	1166.1	30	0	70.031	0.035	+			18410	ISAAKEGQAL	10	54	494.27887504483425	NaN	0	494.27874755859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ISAAKEGQAL_	ENSG00000183091|ENST00000397345|NEB;ENSG00000183091|ENST00000397345|NEB;ENSG00000183091|ENST00000397345|NEB;nc|ENSG00000183091|P20929-3|NEB;nc|ENSG00000183091|P20929-3|NEB;nc|ENSG00000183091|P20929-3|NEB;NEB|p.L4198Cfs*51|1|0.35|ENSG00000183091|chr2:151568357-151568357|G/-|frameshift_variant;NEB|p.L4198Cfs*51|1|0.35|ENSG00000183091|chr2:151568357-151568357|G/-|frameshift_variant;NEB|p.L4198Cfs*51|1|0.35|ENSG00000183091|chr2:151568357-151568357|G/-|frameshift_variant	56.43379154798735	0.2634004003759929	2				NaN	NaN	0	NaN	11044	4460	15503
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15513	40.68	NaN	1944.8	30	0	235.66	0.143				-1	 	0	61	530.2602855483408	1058.5060181634815	2	530.2606811523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11048	4463	15512
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15517	40.696	NaN	2902.3	30	0	506.1	0.143			+	24283	LEWIINLL	8	62	507.303113774694	1012.591674616188	2	507.30255126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LEWIINLL_	REV__ENST00000420646.6_1_4:90757949-90758033:-|nuORF	55.50420428727701	0.5462892107279674	2				NaN	NaN	0	NaN	11049	4466	15516
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15521	40.712	NaN	1406.6	30	0	151.04	0.214	+			2144	ALLDITVTK	9	57	487.3000417042249	NaN	0	487.299560546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ALLDITVTK_	nc|ENSG00000136141|Q9Y2L9-2|LRCH1	69.6276240434122	0.10825701912424071	2				NaN	NaN	0	NaN	11050	4469	15520
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15522	40.715	NaN	2779	30	0	1194.8	0.106	+			17341	IAISKPLHY	9	61	521.3075426786459	1040.6005324240916	2	521.3087158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IAISKPLHY_	ENSG00000172742|ENST00000641962|OR4D9	34.172542307311794	0.4838870758800184	2				NaN	NaN	0	NaN	11051	4469	15520
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15523	40.717	NaN	2675	30	0	293.72	0.106	+			8898	EETVRIVAL	9	59	515.3002191221373	1028.5858853110744	2	515.3009643554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EETVRIVAL_	ENSG00000087077|ENST00000200457|TRIP6;ENSG00000145012|ENST00000617246|LPP;ENST00000476870.5_1_7:100468185-100470922:+|nuORF;ENST00000488670.1_1_7:100469170-100470405:+|nuORF	63.30626980617807	0.18605348971131092	2				NaN	NaN	0	NaN	11052	4469	15520
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15524	40.719	NaN	1335.6	30	0	65.701	0.106			+	-1	FYEWRKMHRRQ	11	57	551.6123046875	NaN	0	551.6123046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_FYEWRKM(Oxidation (M))HRRQ_	REV__ENSG00000198734|ENST00000367797|F5;REV__F5|p.G1754Efs*13|1|0.41|ENSG00000198734|chr1:169529768-169529768|T/-|frameshift_variant;REV__F5|p.S1606Pfs*5|1|0.07|ENSG00000198734|chr1:169536662-169536663|-/CTGAAGTGGA|frameshift_variant	1.5229847967890655	0.456735970842152	2				NaN	NaN	0	NaN	11053	4469	15520
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15525	40.721	NaN	895.29	30	0	100.81	0.033	+			1640	AGPESSLAL	9	38	422.72356987162425	843.4325868100485	2	422.7237548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AGPESSLAL_	DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;nc|ENSG00000187908|Q9UGM3-2|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-4|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-8|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1	53.351449002276354	0.2690372970092375	2				NaN	NaN	0	NaN	11054	4469	15520
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15533	40.749	NaN	7357.8	30	0	1474.7	0.214	+			18846	IVALILSTK	9	66	479.3203346719855	956.626116410771	2	479.3208923339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IVALILSTK_	ENSG00000185883|ENST00000330398|ATP6V0C	93.1432384553994	0.056003526918089595	2				NaN	NaN	0	NaN	11056	4475	15532
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15534	40.753	NaN	1512.7	30	0	194.89	0.106			+	36165	SELAFQLL	8	50	460.75891598442934	919.5032790356587	2	460.7597351074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SELAFQLL_	REV__ENSG00000070950|ENST00000264926|RAD18;REV__RAD18|p.T371Nfs*9|1|0.08|ENSG00000070950|chr3:8902436-8902437|-/T|frameshift_variant	71.29570347882199	0.39610197767395533	2				NaN	NaN	0	NaN	11057	4475	15532
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15535	40.755	NaN	860.12	30	0	83.097	0.035			+	10336	ETTAGILTLT	10	45	510.28521728515625	NaN	0	510.28521728515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ETTAGILTLT_	REV__tr|U7SYW1|U7SYW1_FUSNUATPaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00939PE=3SV=1	27.882242232435846	0.4086243523356342	2				NaN	NaN	0	NaN	11058	4475	15532
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15543	40.775	NaN	1814.1	30	0	207.3	0.143	+			8300	EAIRISPTF	9	51	517.2869123845526	1032.559271835905	2	517.2876586914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EAIRISPTF_	ENSG00000147162|ENST00000373719|OGT;nc|ENSG00000147162|O15294-2|OGT;nc|ENSG00000147162|O15294-3|OGT;nc|ENSG00000147162|O15294-4|OGT	44.116797842482775	0.37197099687881774	2				NaN	NaN	0	NaN	11063	4478	15542
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15556	40.814	NaN	1403.7	30	0	247.9	0.214			+	17816	IEWILKEF	8	60	539.3012084960938	NaN	0	539.3012084960938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IEWILKEF_	REV__ENSG00000058673|ENST00000367210|ZC3H11A;REV__ENST00000495527.5_2_1:203819629-203821524:+|nuORF	31.954861631926434	1.7418937515398478	2				NaN	NaN	0	NaN	11070	4484	15555
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15557	40.817	NaN	1485.7	30	0	178.31	0.106				-1	 	0	47	446.2316965585543	890.4488401839086	2	446.23193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11071	4484	15555
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15558	40.819	NaN	1470.8	30	0	108.02	0.036	+			3344	ASMSAFDPLK	10	59	533.7658966107869	NaN	0	533.7658081054688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASMSAFDPLK_	ENSG00000114354|ENST00000240851|TFG;nc|ENSG00000114354|Q92734-2|TFG;nc|ENSG00000114354|Q92734-3|TFG;nc|ENSG00000114354|Q92734-4|TFG;TFG|p.N173K|2|0.38|ENSG00000114354|chr3:100732611-100732611|C/A|missense_variant	85.86182877749512	0.07061569993707435	2				NaN	NaN	0	NaN	11072	4484	15555
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15568	40.934	NaN	14651	30	0	2058.7	0.214				-1	 	0	71	519.2969462018939	1036.5793394705877	2	519.2979736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11079	4487	15567
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15569	40.937	NaN	5728.6	30	0	883.98	0.106	+			40635	SVAQLLLSK	9	65	479.7996283058378	957.5847036784756	2	479.79974365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVAQLLLSK_	ENSG00000073614|ENST00000399788|KDM5A;ENST00000541335.1_1_12:431581-432275:-|nuORF;KDM5A|p.G1200Dfs*9|1|0.28|ENSG00000073614|chr12:307787-307787|T/-|frameshift_variant;KDM5A|p.V1093*|1|0.32|ENSG00000073614|chr12:309905-309905|T/-|frameshift_variant;KDM5A|p.V1093Sfs*20|1|0.21|ENSG00000073614|chr12:309904-309905|-/T|frameshift_variant;nc|ENSG00000073614|P29375-2|KDM5A	73.84112541714126	0.12417958948937492	2				NaN	NaN	0	NaN	11080	4487	15567
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15570	40.939	NaN	2053.6	30	0	330.57	0.106				-1	 	0	50	483.2681857363838	964.5218185395677	2	483.2690734863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11081	4487	15567
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15571	40.941	NaN	1871.8	30	0	289.72	0.106				-1	VYKDYCCA	8	55	511.20884730407846	1020.4031416749569	2	511.2091979980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_VYKDYC(Carbamidomethyl (C))CA_	tr|U7T3T1|U7T3T1_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00248PE=4SV=1	40.5726180659479	0.6527593143185008	2				NaN	NaN	0	NaN	11082	4487	15567
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15572	40.943	NaN	2246.3	30	0	242.77	0.034	+			3571	ASVAWAVLK	9	61	472.781242320724	943.547931708248	2	472.7826232910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASVAWAVLK_	ENSG00000106714|ENST00000297668|CNTNAP3;ENSG00000154529|ENST00000377561|CNTNAP3B;ENSG00000283378|ENST00000636699|CNTNAP3C;nc|ENSG00000154529|Q96NU0-2|CNTNAP3B;nc|ENSG00000283378|Q9BZ76-2|CNTNAP3	77.31757898189308	0.1091473830098891	2				NaN	NaN	0	NaN	11083	4487	15567
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15578	40.959	NaN	1109.2	30	0	88.747	0.143			+	13850	GQVQEGLVR	9	44	493.27670257998756	984.5388522267751	2	493.276611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GQVQEGLVR_	REV__NOXA1|p.L249Sfs*66|1|0.4|ENSG00000188747|chr9:137431278-137431278|C/-|frameshift_variant	34.172542307311794	0.4838870758800184	2				NaN	NaN	0	NaN	11086	4490	15577
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15583	40.975	NaN	1997.4	30	0	458.41	0.214	+			5475	AVAAFVLYK	9	56	491.2914188421463	980.5682847510926	2	491.2919616699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVAAFVLYK_	CCDC107|p.A74V|1|0.5|ENSG00000159884|chr9:35658690-35658690|C/T|missense_variant;ENSG00000159884|ENST00000426546|CCDC107;nc|ENSG00000159884|Q8WV48-2|CCDC107;nc|ENSG00000159884|Q8WV48-3|CCDC107;nc|ENSG00000159884|Q8WV48-4|CCDC107;nc|ENSG00000159884|Q8WV48-5|CCDC107	74.25504064058377	0.12238981753128622	2				NaN	NaN	0	NaN	11088	4493	15582
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15584	40.979	NaN	1619	30	0	357.96	0.106			+	26668	LVFLEFKN	8	55	505.2888582742597	1008.5631636153195	2	505.2887878417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LVFLEFKN_	REV__CNGA2|p.K126N|1|0.73|ENSG00000183862|chrX:151740797-151740797|G/T|missense_variant	47.91560031466742	0.6071945918984287	2				NaN	NaN	0	NaN	11089	4493	15582
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15585	40.981	NaN	2230	30	0	525.13	0.034	+			17707	IEMKVVSL	8	59	459.7691041337859	917.5236553343718	2	459.76971435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IEMKVVSL_	ENSG00000131941|ENST00000254260|RHPN2;ENST00000591502.1_1_19:33481365-33482797:-|nuORF;ENST00000592247.1_1_19:33470904-33481620:-|nuORF;nc|ENSG00000131941|Q8IUC4-2|RHPN2;nc|ENSG00000258628|A8MT19|RHPN2P1	96.19043198914106	0.25873003980794995	2				NaN	NaN	0	NaN	11090	4493	15582
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15593	41	NaN	1766.8	30	0	290.73	0.214			+	8429	EAQVGIPTQL	10	53	528.2893564680908	1054.5641600029815	2	528.2906494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EAQVGIPTQL_	REV__ENSG00000142252|ENST00000270257|GEMIN7	37.81151784470057	0.569310847604193	2				NaN	NaN	0	NaN	11095	4496	15592
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15594	41.004	NaN	945.98	30	0	69.205	0.033	+			721	AEAVLTAPL	9	50	442.75779754421035	NaN	0	442.75775146484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEAVLTAPL_	ENST00000333046.8_3_9:140093874-140093928:-|nuORF	35.61828744233558	0.29773779453147337	2				NaN	NaN	0	NaN	11096	4496	15592
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15605	41.029	NaN	1872.2	30	0	307.24	0.214				-1	 	0	55	483.2681857363838	964.5218185395677	2	484.2755126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11104	4499	15604
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15606	41.033	NaN	2103	30	0	313.58	0.035	+			11409	FLQISDALI	9	61	510.2918934362266	NaN	0	510.31024169921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FLQISDALI_	ENSG00000100505|ENST00000684578|TRIM9;ENSG00000119283|ENST00000366653|TRIM67;nc|ENSG00000100505|Q9C026-4|TRIM9;nc|ENSG00000100505|Q9C026-5|TRIM9;nc|ENSG00000100505|Q9C026|TRIM9;nc|ENSG00000119283|Q6ZTA4-2|TRIM67;TRIM9|p.N657Kfs*9|1|0.29|ENSG00000100505|chr14:50979486-50979487|-/T|frameshift_variant	51.33545320467046	0.19748963086191895	2				NaN	NaN	0	NaN	11105	4499	15604
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15618	41.069	NaN	1983.9	30	0	260.77	0.143	+			1938	AISLIFSLK	9	63	496.3125593617751	990.6105657903502	2	496.8151550292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AISLIFSLK_	ENSG00000171759|ENST00000553106|PAH;ENST00000549111.5_1_12:103248818-103310977:-|nuORF;PAH|p.S70Lfs*7|1|0.06|ENSG00000171759|chr12:102894879-102894880|-/TAAGAAGAAAG|frameshift_variant	71.87747018426188	0.13267044672804276	2				NaN	NaN	0	NaN	11111	4505	15617
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15625	41.089	NaN	3782.1	30	0	602.01	0.214			+	13615	GLYLGSIMK	9	59	491.27481914233266	980.5350853514653	2	491.2754821777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GLYLGSIMK_	REV__ENSG00000156510|ENST00000354624|HKDC1;REV__nc|ENSG00000156510|Q2TB90-2|HKDC1;REV__nc|ENSG00000156510|Q2TB90-3|HKDC1	74.25504064058377	0.12238981753128622	2				NaN	NaN	0	NaN	11115	4508	15624
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15626	41.092	NaN	2075.5	30	0	194.44	0.036	+			25558	LPWEVQRY	8	64	545.7871774529461	1089.5598019726922	2	545.7889404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LPWEVQRY_	ENSG00000140279|ENST00000389039|DUOX2;nc|ENSG00000140279|Q9NRD8|DUOX2	54.776311868738084	0.5534952410049249	2				NaN	NaN	0	NaN	11116	4508	15624
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15640	41.132	NaN	3318	30	0	383.79	0.215	+			3720	ATAAVIFLH	9	47	471.77348899727514	941.5324250613503	2	471.7737731933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATAAVIFLH_	ENSG00000120992|ENST00000316963|LYPLA1;ENST00000517297.5_1_8:54967680-55014407:-|nuORF;ENST00000519926.5_1_8:54966225-55014407:-|nuORF;ENST00000521856.1_1_8:55013466-55014395:-|nuORF;nc|ENSG00000120992|O75608-2|LYPLA1	143.97458802002905	0.008615427130953528	2				NaN	NaN	0	NaN	11124	4514	15639
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15641	41.135	NaN	1246.2	30	0	186.17	0.106				-1	MKLQNKIL	8	50	515.3095683860025	1028.604583838805	2	515.310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))MKLQNKIL_	ENST00000426016.5_1_2:39281957-39283889:-|nuORF	33.51558372728122	0.7005509609380386	2				NaN	NaN	0	NaN	11125	4514	15639
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15642	41.137	NaN	1965.5	30	0	274.55	0.106			+	31520	QLHFSDALQ	9	60	529.7675808523926	NaN	0	529.768310546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QLHFSDALQ_	REV__ENSG00000197694|ENST00000372739|SPTAN1;REV__nc|ENSG00000197694|Q13813-3|SPTAN1;REV__nc|ENSG00000197694|Q13813|SPTAN1;REV__SPTAN1|p.T595Lfs*44|1|0.28|ENSG00000197694|chr9:128582823-128582823|A/-|frameshift_variant	65.46538089061403	0.1260090208616529	2				NaN	NaN	0	NaN	11126	4514	15639
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15643	41.139	NaN	1368.2	30	0	111.84	0.106	+			24272	LEVLVKTL	8	51	457.7991845195	913.5838161058	2	457.8000183105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LEVLVKTL_	BAG6|p.A35Pfs*3|1|0.35|ENSG00000204463|chr6:31651661-31651661|C/-|frameshift_variant;ENSG00000204463|ENST00000676615|BAG6;nc|ENSG00000204463|P46379-2|BAG6;nc|ENSG00000204463|P46379-4|BAG6;nc|ENSG00000204463|P46379-5|BAG6;nc|ENSG00000204463|P46379|BAG6	42.396135135203025	0.6414440140393314	2				NaN	NaN	0	NaN	11127	4514	15639
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15644	41.141	NaN	1920.2	30	0	560.15	0.034	+			2891	ASATAFFLK	9	60	478.26546693126136	954.5163809293227	2	478.26611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASATAFFLK_	ENST00000225726.9_1_17:61843531-61850919:-|nuORF	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	11128	4514	15639
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15650	41.157	NaN	1266	30	0	342.37	0.214			+	30300	PTLGPSVPL	9	37	440.7600284471994	879.5055039611988	2	440.760498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PTLGPSVPL_	REV__ENST00000534407.5_1_11:124757602-124761787:-|nuORF	40.5726180659479	0.4135428067754104	2				NaN	NaN	0	NaN	11131	4517	15649
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15651	41.161	NaN	1266.7	30	0	168.02	0.034	+			16818	HPDLEPIL	8	49	467.25536249090413	NaN	0	467.25494384765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HPDLEPIL_	ENSG00000141664|ENST00000269499|ZCCHC2;ENST00000591632.5_1_18:60191431-60230292:+|nuORF;nc|ENSG00000141664|Q9C0B9-2|ZCCHC2;ZCCHC2|p.P959Lfs*21|1|0.06|ENSG00000141664|chr18:62574947-62574948|-/CTGTTCCT|frameshift_variant	44.53106598305862	1.7418937515398478	2				NaN	NaN	0	NaN	11132	4517	15649
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15658	41.179	NaN	3207.3	30	0	526.91	0.214	+			25516	LPSSTRITY	9	70	519.2858209483308	1036.5570889634614	2	519.287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LPSSTRITY_	CIC|p.E1288Gfs*56|1|0.3|ENSG00000079432|chr19:42293654-42293655|-/G|frameshift_variant;CIC|p.P1248Hfs*54|3|0.34|ENSG00000079432|chr19:42293224-42293224|C/-|frameshift_variant;CIC|p.T1217Nfs*6|1|0.23|ENSG00000079432|chr19:42293133-42293134|-/A|frameshift_variant;ENSG00000079432|ENST00000681038|CIC;nc|ENSG00000079432|Q96RK0-2|CIC	82.7504851949679	0.08565546331141553	2				NaN	NaN	0	NaN	11136	4520	15657
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15659	41.182	NaN	1739.2	30	0	565.49	0.036			+	29362	PADAARGVLW	10	60	528.2843627929688	NaN	0	528.2843627929688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PADAARGVLW_	REV__ENSG00000205084|ENST00000258173|TMEM231;REV__ENST00000564318.1_1_16:75573894-75575375:-|nuORF;REV__nc|ENSG00000205084|Q9H6L2-2|TMEM231;REV__nc|ENSG00000205084|Q9H6L2-3|TMEM231	29.14955571784316	0.4044631218331212	2				NaN	NaN	0	NaN	11137	4520	15657
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15666	41.2	NaN	3927	30	0	642.44	0.143				-1	 	0	62	499.2708546055482	996.5271562778964	2	499.2711486816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11141	4523	15665
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15677	41.236	NaN	2497.6	30	0	569.57	0.214	+			28810	NPITVQTVY	9	59	517.778956096107	1033.5433592590139	2	517.7792358398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NPITVQTVY_	ENSG00000189067|ENST00000622633|LITAF;nc|ENSG00000189067|Q99732-2|LITAF;nc|ENSG00000189067|Q99732-3|LITAF	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	11146	4529	15676
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15678	41.24	NaN	1662.5	30	0	160.98	0.106			+	9564	ELGFGGLGGAI	11	62	495.76605169511504	989.5175504570301	2	495.7666320800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ELGFGGLGGAI_	REV__ENSG00000169710|ENST00000306749|FASN	53.351449002276354	0.38280258784255455	2				NaN	NaN	0	NaN	11147	4529	15676
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15679	41.242	NaN	829.15	30	0	89.975	0.106			+	26315	LSVSLSLPL	9	44	464.7886241462501	NaN	0	464.7886047363281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSVSLSLPL_	REV__ENST00000555253.1_1_14:75413094-75413220:-|nuORF	38.80614096846853	0.28164298475537564	2				NaN	NaN	0	NaN	11148	4529	15676
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15680	41.244	NaN	959.19	30	0	105.21	0.106	+			8828	EELLTKTF	8	47	490.76988820082124	NaN	0	490.7688293457031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EELLTKTF_	ENSG00000183060|ENST00000684762|LYSMD4;ENST00000344791.6_2_15:100271615-100273170:-|nuORF;ENST00000450512.1_3_15:100271609-100273550:-|nuORF;ENST00000479791.1_1_15:100271835-100272213:-|nuORF	20.481830146152948	1.741893751539848	2				NaN	NaN	0	NaN	11149	4529	15676
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15681	41.246	NaN	981.25	30	0	112.2	0.034	+			8022	DTPLLPPAV	9	48	461.7659521871899	NaN	0	461.7660217285156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DTPLLPPAV_	ENSG00000163517|ENST00000295757|HDAC11;nc|ENSG00000163517|Q96DB2-2|HDAC11	25.450171626174864	0.34907449758287085	2				NaN	NaN	0	NaN	11150	4529	15676
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15689	41.265	NaN	1146.7	30	0	187.89	0.144	+			18902	IVLTILSLSG	10	55	508.32354736328125	NaN	0	508.32354736328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IVLTILSLSG_	ENSG00000162753|ENST00000367714|SLC9C2;SLC9C2|p.F247Lfs*5|1|0.1|ENSG00000162753|chr1:173581908-173581908|A/-|frameshift_variant;SLC9C2|p.K843Nfs*2|1|0.57|ENSG00000162753|chr1:173524080-173524080|T/-|frameshift_variant	37.15910966729921	0.3781637092648983	2				NaN	NaN	0	NaN	11155	4532	15688
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15700	41.301	NaN	2572.4	30	0	1064.3	0.214			+	28240	NDALFMIIK	9	57	532.7948373024792	1063.5751216717583	2	532.7965698242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NDALFMIIK_	REV__tr|U7SRL8|U7SRL8_FUSNUAAAdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01573PE=4SV=1	76.7741389293348	0.11149722112137898	2				NaN	NaN	0	NaN	11160	4538	15699
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15701	41.305	NaN	1643.1	30	0	152.98	0.036	+			44027	TPMFVVKAY	9	56	528.2823703969913	1054.5501878607824	2	528.2850952148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TPMFVVKAY_	ENSG00000167658|ENST00000309311|EEF2	101.60071028292904	0.0375685401170269	2				NaN	NaN	0	NaN	11161	4538	15699
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15706	41.319	NaN	1308.5	30	0	336.9	0.214	+			2304	AMGDVVIFK	9	53	490.26890668626316	978.5232604393264	2	490.26776123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AMGDVVIFK_	ENSG00000163946|ENST00000683822|TASOR;nc|ENSG00000163946|Q9UK61-3|TASOR;nc|ENSG00000163946|Q9UK61-4|TASOR	58.78195531508484	0.22376836668196862	2				NaN	NaN	0	NaN	11163	4541	15705
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15707	41.323	NaN	1341.3	30	0	90.252	0.035	+			45467	TYAPVKSFL	9	52	513.2869508704592	1024.5593488077184	2	513.2872314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TYAPVKSFL_	ENSG00000157350|ENST00000342907|ST3GAL2	31.529811441608018	0.5085848003137583	2				NaN	NaN	0	NaN	11164	4541	15705
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15716	41.344	NaN	568.22	30	0	90.959	0.214	+			1992	AKESSKSQKI	10	33	369.2119033699685	NaN	0	369.2117004394531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AKESSKSQKI_	nc|ENSG00000092853|Q9HAW4-3|CLSPN	22.579656572578934	0.4201028297492154	2				NaN	NaN	0	NaN	11170	4544	15715
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15717	41.348	NaN	1170	30	0	386.74	0.034			+	24958	LLALGTFAAA	10	45	474.28224884130145	946.5499447494029	2	474.2801208496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LLALGTFAAA_	REV__ENSG00000040608|ENST00000043402|RTN4R	31.954861631926434	0.6188749698950511	2				NaN	NaN	0	NaN	11171	4544	15715
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15722	41.362	NaN	5035.4	30	0	341.66	0.214	+			50685	YEELVRMV	8	65	519.7672668782441	1037.519980823288	2	519.7686767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YEELVRMV_	nc|ENSG00000092841|P60660-2|MYL6	74.25504064058377	0.37144338840759816	2				NaN	NaN	0	NaN	11173	4547	15721
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15723	41.366	NaN	2411.6	30	0	436.91	0.032			+	10849	FASVGYAI	8	43	414.2178512666833	826.4211496001666	2	414.2186584472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FASVGYAI_	REV__ENSG00000102934|ENST00000219207|PLLP	54.76467175910256	0.5536104764165384	2				NaN	NaN	0	NaN	11174	4547	15721
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15729	41.382	NaN	1358.9	30	0	384.7	0.144			+	1917	AIQTKPFPAE	10	53	551.3012814599191	NaN	0	551.3017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AIQTKPFPAE_	REV__ENSG00000133706|ENST00000394434|LARS1;REV__ENST00000512412.1_1_5:145519224-145523084:-|nuORF;REV__ENST00000514104.5_1_5:145522433-145523105:-|nuORF;REV__nc|ENSG00000133706|Q9P2J5-2|LARS1	32.81241826257853	0.3924360933802784	2				NaN	NaN	0	NaN	11177	4550	15728
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15737	41.404	NaN	1353.7	30	0	121.56	0.142	+			47021	VLALTLPQL	9	55	484.3135731713145	NaN	0	484.3139953613281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VLALTLPQL_	ENST00000591512.2_2_19:12946148-12946217:-|nuORF	29.14955571784316	0.3303970763161698	2				NaN	NaN	0	NaN	11182	4553	15736
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15744	41.424	NaN	1536.4	30	0	324.56	0.214	+			9136	EGLQALGPL	9	42	449.255209899133	896.495866865066	2	449.256103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EGLQALGPL_	ENSG00000162006|ENST00000543963|MSLNL;MSLNL|p.S610Afs*80|2|0.29|ENSG00000162006|chr16:770105-770105|G/-|frameshift_variant;nc|ENSG00000162006|Q96KJ4|MSLNL	42.396135135203025	0.392153681582562	2				NaN	NaN	0	NaN	11186	4556	15743
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15745	41.427	NaN	2057.5	30	0	418.34	0.035			+	16055	HAWVEFRA	8	55	508.25793241584313	1014.5013118984863	2	508.76019287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HAWVEFRA_	REV__ENSG00000140400|ENST00000267978|MAN2C1;REV__ENST00000566099.5_1_15:75649132-75651406:-|nuORF;REV__nc|ENSG00000140400|Q9NTJ4-2|MAN2C1;REV__nc|ENSG00000140400|Q9NTJ4-3|MAN2C1;REV__nc|ENSG00000140400|Q9NTJ4-4|MAN2C1	42.47446043378293	0.6409579893742323	2				NaN	NaN	0	NaN	11187	4556	15743
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15761	41.479	NaN	2266.5	30	0	296.18	0.214	+			2184	ALNAGSYASL	10	63	483.7474426114076	965.4803322896153	2	483.7475280761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ALNAGSYASL_	CLASP2|p.L1169Ffs*6|1|0.14|ENSG00000163539|chr3:33510729-33510730|-/A|frameshift_variant;CLASP2|p.M744Nfs*4|1|0.19|ENSG00000163539|chr3:33560868-33560869|-/T|frameshift_variant;CLASP2|p.M744Wfs*33|2|0.29|ENSG00000163539|chr3:33560869-33560869|T/-|frameshift_variant;ENSG00000163539|ENST00000682230|CLASP2;nc|ENSG00000163539|O75122-2|CLASP2;nc|ENSG00000163539|O75122-3|CLASP2;nc|ENSG00000163539|O75122|CLASP2	134.7655990226056	0.012149689860786373	2				NaN	NaN	0	NaN	11194	4565	15760
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15762	41.483	NaN	2561.1	30	0	301.66	0.106	+			28168	NANRIALDF	9	56	517.274442592409	1032.5343322516178	2	517.2747192382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NANRIALDF_	ENSG00000131981|ENST00000254301|LGALS3;ENST00000556438.6_1_14:55604729-55611986:+|nuORF	66.42927471994793	0.16001998865088202	2				NaN	NaN	0	NaN	11195	4565	15760
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15763	41.485	NaN	1151.4	30	0	83.677	0.106	+			45440	TVYLVVAVA	9	52	467.7841491699219	NaN	0	467.7841491699219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVYLVVAVA_	PCDHB12|p.L694V|1|0.14|ENSG00000120328|chr5:141210987-141210987|T/G|missense_variant	35.200714571348534	0.2998460331538257	2				NaN	NaN	0	NaN	11196	4565	15760
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15764	41.486	NaN	817.93	30	0	84.057	0.034	+			50937	YHAVSVTQ	8	47	452.7304382324219	NaN	0	452.7304382324219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YHAVSVTQ_	ENST00000571669.6_1_17:2322656-2322995:-|nuORF	30.503639358989545	1.7418937515398478	2				NaN	NaN	0	NaN	11197	4565	15760
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15780	41.529	NaN	1822.5	30	0	299.85	0.214	+			22092	KSMFLTVKI	9	55	533.8206109536821	NaN	0	533.8206176757812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSMFLTVKI_	DSCAML1|p.M1051Wfs*8|3|0.26|ENSG00000177103|chr11:117469970-117469970|C/-|frameshift_variant;DSCAML1|p.P1274Lfs*7|2|0.3|ENSG00000177103|chr11:117450616-117450616|G/-|frameshift_variant;DSCAML1|p.P2046Qfs*45|1|0.5|ENSG00000177103|chr11:117428533-117428533|G/-|frameshift_variant;DSCAML1|p.S2067Afs*24|1|0.48|ENSG00000177103|chr11:117428472-117428472|G/-|frameshift_variant;ENSG00000177103|ENST00000651296|DSCAML1;nc|ENSG00000177103|Q8TD84-2|DSCAML1	69.6276240434122	0.10825701912424071	2				NaN	NaN	0	NaN	11207	4571	15779
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15781	41.533	NaN	1519	30	0	152.18	0.035			+	27412	MKVVQLWI	8	55	508.8022850886616	1015.5900172441233	2	508.8024597167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MKVVQLWI_	REV__ENST00000379079.6_2_11:32409667-32409850:-|nuORF	40.5726180659479	0.6527593143185008	2				NaN	NaN	0	NaN	11208	4571	15779
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15789	41.553	NaN	3431.2	30	0	739.81	0.214				-1	 	0	52	425.7365600663413	849.4585671994827	2	425.7369689941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11213	4574	15788
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15790	41.556	NaN	1616.7	30	0	132.48	0.034	+			28376	NELILKTL	8	54	472.2943568200364	942.5741607068728	2	472.2938232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NELILKTL_	ENSG00000143179|ENST00000367879|UCK2	75.04331003522576	0.3648751570195447	2				NaN	NaN	0	NaN	11214	4574	15788
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15795	41.571	NaN	5054.4	30	0	744.97	0.142				-1	 	0	67	484.26548676463136	966.5164205960627	2	484.2656555175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11216	4577	15794
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15804	41.594	NaN	2248.4	30	0	284.68	0.143	+			5074	ATSLFIKLN	9	61	503.79910468666515	1005.5836564401303	2	503.800048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSLFIKLN_	ENSG00000159445|ENST00000368814|THEM4	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	11222	4580	15803
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15822	41.652	NaN	2295	30	0	192.05	0.144	+			19065	IYGSYQPTY	9	61	546.2568055709887	1090.4990582087773	2	546.2574462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IYGSYQPTY_	ENSG00000151835|ENST00000382292|SACS;nc|ENSG00000151835|Q9NZJ4-2|SACS;SACS|p.S4423Ffs*42|1|0.18|ENSG00000151835|chr13:23330610-23330611|-/G|frameshift_variant	65.80317337860623	0.1652391959156183	2				NaN	NaN	0	NaN	11231	4589	15821
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15828	41.67	NaN	1082.2	30	0	110.13	0.214	+			10548	EYAKIFTTY	9	54	568.2863445857012	1134.5581362382022	2	568.2876586914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EYAKIFTTY_	ENSG00000087253|ENST00000262134|LPCAT2;ENST00000562299.1_1_16:55612978-55617007:+|nuORF;nc|ENSG00000087253|Q7L5N7-2|LPCAT2	58.78195531508484	0.22376836668196862	2				NaN	NaN	0	NaN	11234	4592	15827
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15829	41.674	NaN	1085.8	30	0	84.953	0.035			+	9595	ELLAGVAGFY	10	54	520.2774418857991	NaN	0	520.2775268554688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ELLAGVAGFY_	REV__ENSG00000125779|ENST00000610179|PANK2;REV__ENSG00000152782|ENST00000307534|PANK1;REV__nc|ENSG00000125779|Q9BZ23-2|PANK2;REV__nc|ENSG00000125779|Q9BZ23-3|PANK2;REV__nc|ENSG00000125779|Q9BZ23|PANK2;REV__nc|ENSG00000152782|Q8TE04-2|PANK1;REV__nc|ENSG00000152782|Q8TE04-3|PANK1;REV__nc|ENSG00000152782|Q8TE04-4|PANK1;REV__nc|ENSG00000152782|Q8TE04|PANK1	45.9519527083369	0.331194823726099	2				NaN	NaN	0	NaN	11235	4592	15827
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15842	41.711	NaN	4097.2	30	0	2164.3	0.214				-1	 	0	54	483.25002665191107	964.4855003706222	2	483.250732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11242	4598	15841
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15843	41.715	NaN	1527.3	30	0	154.73	0.034			+	11518	FPDQLAEK	8	59	474.24489628304383	946.4752396328877	2	474.2453918457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FPDQLAEK_	REV__ENSG00000100441|ENST00000553935|KHNYN;REV__KHNYN|p.R415H|1|0.21|ENSG00000100441|chr14:24432505-24432505|G/A|missense_variant	40.77816245573522	0.6514838689002179	2				NaN	NaN	0	NaN	11243	4598	15841
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15848	41.729	NaN	2230	30	0	301.77	0.143	+			7929	DSGYFPNEL	9	61	521.2308691974288	1040.4471854616575	2	521.230712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DSGYFPNEL_	ENST00000498554.5_1_19:2097388-2099029:+|nuORF	51.33545320467046	0.2872990594074956	2				NaN	NaN	0	NaN	11245	4601	15847
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15863	41.773	NaN	1614.7	30	0	117.31	0.214	+			42128	SYLTSASSL	9	51	464.7341998283076	927.4538467234153	2	464.7343444824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SYLTSASSL_	ENSG00000104517|ENST00000520539|UBR5;nc|ENSG00000104517|O95071-2|UBR5;UBR5|p.E2121Kfs*28|1|0.39|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant;UBR5|p.E2121Rfs*13|1|0.28|ENSG00000104517|chr8:102277120-102277121|-/T|frameshift_variant;UBR5|p.F2571Lfs*4|2|0.31|ENSG00000104517|chr8:102262044-102262044|A/-|frameshift_variant;UBR5|p.K2120Rfs*13|1|0.24|ENSG00000104517|chr8:102277121-102277122|TT/-|frameshift_variant	56.72105179125745	0.24094814563026265	2				NaN	NaN	0	NaN	11254	4607	15862
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15864	41.776	NaN	1256.2	30	0	119.16	0.106	+			29855	PLEFKKIN	8	55	494.7944641122046	987.5743752912092	2	494.79443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PLEFKKIN_	ZNF318|p.T2157Qfs*54|1|0.39|ENSG00000171467|chr6:43337529-43337529|T/-|frameshift_variant	49.44154591367651	0.597725784090933	2				NaN	NaN	0	NaN	11255	4607	15862
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15865	41.778	NaN	1233	30	0	137.81	0.106				-1	LSAVEDRM	8	50	468.7244481402607	NaN	0	468.7244873046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_LSAVEDRM(Oxidation (M))_	ENSG00000132481|ENST00000254816|TRIM47;ENST00000587339.2_2_17:73870566-73874273:-|nuORF;ENST00000587774.1_1_17:73872720-73874251:-|nuORF	45.9519527083369	1.7418937515398478	2				NaN	NaN	0	NaN	11256	4607	15862
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15866	41.78	NaN	1542	30	0	124.87	0.036	+			4968	ATQTVFIFK	9	58	527.800729719951	NaN	0	527.8003540039062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATQTVFIFK_	ENST00000584471.5_1_17:65375300-65375444:+|nuORF	28.5767321226876	0.3332891435719929	2				NaN	NaN	0	NaN	11257	4607	15862
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15895	41.873	NaN	4039.8	30	0	585.96	0.144	+			43082	TEMEHKVAF	9	62	546.2615200841078	1090.5084872350155	2	546.2634887695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEMEHKVAF_	SYNE2|p.I4286M|1|0.08|ENSG00000054654|chr14:64119444-64119444|T/G|missense_variant	42.396135135203025	0.392153681582562	2				NaN	NaN	0	NaN	11271	4622	15894
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15903	41.897	NaN	1494.3	30	0	105.85	0.215			+	24310	LFGVVGEVVM	10	59	525.2882646911767	1048.5619764491532	2	525.2890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LFGVVGEVVM_	REV__ABCA2|p.A1997V|1|0.08|ENSG00000107331|chr9:137011039-137011039|G/A|missense_variant	57.81127852772723	0.38574637483653407	2				NaN	NaN	0	NaN	11276	4625	15902
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15904	41.901	NaN	1010.3	30	0	108.74	0.106			+	24167	LEMPFLLL	8	56	488.2849147136644	NaN	0	488.2842102050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LEMPFLLL_	REV__ENST00000293826.4_1_17:7464239-7464377:+|nuORF	37.028477286268924	1.7418937515398478	2				NaN	NaN	0	NaN	11277	4625	15902
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15905	41.902	NaN	1438.3	30	0	106.74	0.035	+			36270	SENVLQVHL	9	54	519.7821602057519	1037.5497674783037	2	519.7830200195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SENVLQVHL_	ENSG00000115947|ENST00000392857|ORC4;ENST00000495601.1_1_2:148716324-148733527:-|nuORF;ENST00000496670.6_1_2:148709144-148730385:-|nuORF;nc|ENSG00000115947|O43929-2|ORC4;nc|ENSG00000115947|O43929-3|ORC4	62.107414245175825	0.1960472003779324	2				NaN	NaN	0	NaN	11278	4625	15902
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15920	41.954	NaN	1151.1	30	0	181.8	0.141	+			7234	DALGPGVVGI	10	41	449.2554626464844	NaN	0	449.2554626464844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DALGPGVVGI_	ENSG00000117362|ENST00000369109|APH1A;ENST00000461320.5_1_1:150239547-150241394:-|nuORF;nc|ENSG00000117362|Q96BI3-2|APH1A;nc|ENSG00000117362|Q96BI3-3|APH1A	47.91560031466742	0.31878035802558913	2				NaN	NaN	0	NaN	11284	4634	15919
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15942	42.02	NaN	1507.8	30	0	252.7	0.144	+			40907	SVFQETLLH	9	58	537.2844440539799	1072.5543351747597	2	537.2862548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVFQETLLH_	ENST00000602661.5_1_9:108363519-108366511:+|nuORF	54.776311868738084	0.25715957988447635	2				NaN	NaN	0	NaN	11297	4643	15941
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15947	42.036	NaN	1145.3	30	0	245.67	0.144			+	11334	FLDFTRLIG	9	44	541.3068236464723	NaN	0	541.3070068359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FLDFTRLIG_	REV__CDH23|p.F3223Lfs*43|1|0.34|ENSG00000107736|chr10:71812773-71812773|T/-|frameshift_variant;REV__ENSG00000107736|ENST00000224721|CDH23;REV__nc|ENSG00000107736|Q9H251-2|CDH23;REV__nc|ENSG00000107736|Q9H251-3|CDH23;REV__nc|ENSG00000107736|Q9H251-4|CDH23;REV__nc|ENSG00000107736|Q9H251-7|CDH23;REV__nc|ENSG00000107736|Q9H251-8|CDH23;REV__nc|ENSG00000107736|Q9H251-9|CDH23	24.20275056022122	0.35506675290109213	2				NaN	NaN	0	NaN	11299	4646	15946
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15953	42.055	NaN	3270.8	30	0	1572.3	0.142				-1	 	0	58	483.25002665191107	964.4855003706222	2	483.25030517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11302	4649	15952
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15960	42.075	NaN	4258.1	30	0	1848.9	0.214			+	25234	LNELVSQLFG	10	65	560.3059378507386	1118.597322768277	2	560.3069458007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LNELVSQLFG_	REV__PSMD4|p.E333G|1|0.15|ENSG00000159352|chr1:151267207-151267207|A/G|missense_variant	60.1669710687717	0.3643216362415131	2				NaN	NaN	0	NaN	11306	4652	15959
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15961	42.079	NaN	1874.5	30	0	355.95	0.035	+			30579	QANYTIQSL	9	57	519.2668428223457	1036.5191327114912	2	519.2664184570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QANYTIQSL_	ENSG00000086065|ENST00000223500|CHMP5;nc|ENSG00000086065|Q9NZZ3-2|CHMP5	72.87924865735499	0.12833875048249987	2				NaN	NaN	0	NaN	11307	4652	15959
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15973	42.116	NaN	905.83	30	0	69.66	0.139				-1	 	0	48	369.2118658452989	736.4091787573979	2	369.2118835449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11313	4658	15972
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15980	42.136	NaN	851.34	30	0	97.426	0.142	+			25410	LPLARLAAV	9	49	462.30602626057043	NaN	0	462.30615234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LPLARLAAV_	ENSG00000198788|ENST00000675028|MUC2;nc|ENSG00000198788|Q02817|MUC2	24.20275056022122	0.35506675290109213	2				NaN	NaN	0	NaN	11317	4661	15979
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15985	42.153	NaN	1431.2	30	0	481.94	0.214	+			47334	VPDLVHVM	8	45	455.246463323491	908.478373713782	2	455.2464904785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VPDLVHVM_	ENSG00000100614|ENST00000395076|PPM1A;nc|ENSG00000100614|P35813-3|PPM1A;PPM1A|p.R335H|1|0.37|ENSG00000100614|chr14:60289857-60289857|G/A|missense_variant	62.97842346883844	0.4722955155785405	2				NaN	NaN	0	NaN	11319	4664	15984
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15986	42.157	NaN	885.2	30	0	135.53	0.106	+			37462	SLKAGGYPLV	10	47	502.79252449345336	1003.5704960537067	2	502.7936096191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLKAGGYPLV_	ENSG00000183779|ENST00000331569|ZNF703	29.14955571784316	0.6417842315402807	2				NaN	NaN	0	NaN	11320	4664	15984
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15987	42.159	NaN	1087	30	0	66.607	0.106			+	23339	KYSRKALPF	9	64	555.3284301757812	NaN	0	555.3284301757812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KYSRKALPF_	REV__ENST00000542527.6_1_16:22086835-22092068:+|nuORF;REV__ENST00000567004.1_1_16:22086865-22087021:+|nuORF;REV__ENST00000569656.5_1_16:22086865-22095033:+|nuORF	37.15910966729921	0.2899585034171616	2				NaN	NaN	0	NaN	11321	4664	15984
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15988	42.16	NaN	1233.6	30	0	168.84	0.034			+	2125	ALIEPGTPTG	10	46	478.25850670598925	954.5024604787785	2	478.2587585449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ALIEPGTPTG_	REV__ENSG00000143633|ENST00000366649|C1orf131;REV__ENST00000471936.1_1_1:231374554-231376902:-|nuORF;REV__nc|nan|Q8NDD1-5|C1orf131;REV__nc|nan|Q8NDD1-6|C1orf131;REV__nc|nan|Q8NDD1-7|C1orf131	34.172542307311794	0.6007644933930345	2				NaN	NaN	0	NaN	11322	4664	15984
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15992	42.176	NaN	1735.5	30	0	222.97	0.214	+			35198	SAIVEIFSK	9	58	497.2845122098923	992.5544714865846	2	497.2844543457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAIVEIFSK_	ENSG00000050405|ENST00000341247|LIMA1;LIMA1|p.T536Lfs*38|2|0.4|ENSG00000050405|chr12:50177739-50177739|G/-|frameshift_variant;nc|ENSG00000050405|Q9UHB6-4|LIMA1	65.46538089061403	0.16805504838372562	2				NaN	NaN	0	NaN	11323	4667	15991
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15993	42.179	NaN	728.16	30	0	94.052	0.034	+			10318	ETRQILDT	8	44	488.2591857910156	NaN	0	488.2591857910156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ETRQILDT_	ENSG00000123360|ENST00000243052|PDE1B;nc|ENSG00000123360|Q01064-2|PDE1B	38.80614096846853	1.7418937515398478	2				NaN	NaN	0	NaN	11324	4667	15991
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16005	42.217	NaN	2342.8	30	0	276.05	0.144	+			43083	TEMEHKVAF	9	61	546.2615200841078	1090.5084872350155	2	546.263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEMEHKVAF_	SYNE2|p.I4286M|1|0.08|ENSG00000054654|chr14:64119444-64119444|T/G|missense_variant	51.33545320467046	0.2872990594074956	2				NaN	NaN	0	NaN	11330	4673	16004
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16013	42.239	NaN	1830.6	30	0	264.93	0.142				-1	ATHLAISPM	9	61	478.74680993325967	955.4790669333194	2	478.74560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ATHLAISPM(Oxidation (M))_	ENST00000492890.5_1_9:35561867-35563864:-|nuORF	53.351449002276354	0.2690372970092375	2				NaN	NaN	0	NaN	11335	4676	16012
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16019	42.258	NaN	1984.1	30	0	423.73	0.145			+	-1	AFSMQRQLGA	10	59	562.7779293800851	1123.54130582697	2	562.7793579101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_AFSM(Oxidation (M))QRQLGA_	REV__ENSG00000175564|ENST00000314032|UCP3;REV__ENSG00000175567|ENST00000663595|UCP2;REV__nc|ENSG00000175564|P55916-2|UCP3;REV__nc|ENSG00000175564|P55916-3|UCP3	82.7504851949679	0.1731497355276012	2				NaN	NaN	0	NaN	11338	4679	16018
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16024	42.275	NaN	1294.1	30	0	205.84	0.214	+			27490	MMARICLNK	9	57	540.2824101615671	NaN	0	540.2828979492188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MMARICLNK_	ENSG00000035499|ENST00000265036|DEPDC1B;ENST00000512078.5_1_5:59893582-59984814:-|nuORF;nc|ENSG00000035499|Q8WUY9-2|DEPDC1B	54.776311868738084	0.17377682019723872	2				NaN	NaN	0	NaN	11340	4682	16023
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16025	42.278	NaN	843.62	30	0	92.879	0.035				-1	LAVYLSQVM	9	46	520.279808064112	NaN	0	520.2799072265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LAVYLSQVM(Oxidation (M))_	ENSG00000214941|ENST00000399277|ZSWIM7;ENST00000584519.5_1_17:15881363-15902918:-|nuORF	21.9598887501803	0.3626577482100488	2				NaN	NaN	0	NaN	11341	4682	16023
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16030	42.293	NaN	915.29	30	0	87.364	0.214			+	-1	CGLHVGIAAM	10	46	522.7544745052212	NaN	0	522.7546997070312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_C(Carbamidomethyl (C))GLHVGIAAM(Oxidation (M))_	REV__ENSG00000187522|ENST00000378372|HSPA14;REV__ENST00000493178.1_1_10:14880401-14883177:+|nuORF;REV__HSPA14|p.N95Mfs*8|2|0.47|ENSG00000187522|chr10:14848797-14848797|A/-|frameshift_variant	35.200714571348534	0.3845941098745963	2				NaN	NaN	0	NaN	11343	4685	16029
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16031	42.296	NaN	1380.4	30	0	109.91	0.106	+			17839	IFLAPGAGLL	10	56	486.3013598268912	NaN	0	486.30169677734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IFLAPGAGLL_	ALPK1|p.D1036Tfs*3|1|0.09|ENSG00000073331|chr4:112435215-112435215|G/-|frameshift_variant;ALPK1|p.K1021Nfs*18|1|0.21|ENSG00000073331|chr4:112435170-112435170|A/-|frameshift_variant;ENSG00000073331|ENST00000650871|ALPK1;ENST00000504745.1_1_4:113347516-113362363:+|nuORF;nc|ENSG00000073331|Q96QP1-2|ALPK1	39.252832667884924	0.37128895876774715	2				NaN	NaN	0	NaN	11344	4685	16029
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16032	42.298	NaN	1905.9	30	0	259.28	0.035			+	48449	VTLDAQVTY	9	60	505.26434030331757	NaN	0	505.2641906738281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTLDAQVTY_	REV__ENSG00000121988|ENST00000264159|ZRANB3;REV__ENST00000403017.2_1_2:135957914-136028945:-|nuORF;REV__nc|ENSG00000121988|Q5FWF4-2|ZRANB3;REV__nc|ENSG00000121988|Q5FWF4-3|ZRANB3;REV__nc|ENSG00000121988|Q5FWF4-4|ZRANB3;REV__ZRANB3|p.P883S|1|0.14|ENSG00000121988|chr2:135207796-135207796|G/A|missense_variant	37.81151784470057	0.28666463014928195	2				NaN	NaN	0	NaN	11345	4685	16029
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16050	42.354	NaN	1804.4	30	0	259.78	0.214	+			46942	VIYPARISL	9	52	516.3161531915067	1030.6177534498133	2	516.3162231445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VIYPARISL_	DNAJB1|p.Q328Pfs*8|1|0.26|ENSG00000132002|chr19:14515980-14515981|-/G|frameshift_variant;ENSG00000132002|ENST00000254322|DNAJB1;nc|ENSG00000132002|P25685-2|DNAJB1	34.172542307311794	0.4838870758800184	2				NaN	NaN	0	NaN	11354	4694	16049
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16051	42.357	NaN	683.27	30	0	64.306	0.03				-1	 	0	28	322.6256722534161	643.2367915736322	2	322.6263427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11355	4694	16049
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16057	42.373	NaN	867.22	30	0	80.26	0.138				-1	 	0	39	322.6256722534161	643.2367915736322	2	322.6265563964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11358	4697	16056
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16063	42.391	NaN	3397.3	30	0	564.79	0.214	+			42287	TAEGTVFHF	9	63	504.7429895728848	1007.4714262125697	2	504.74359130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAEGTVFHF_	ENSG00000141076|ENST00000314423|UTP4;nc|ENSG00000141076|Q969X6-2|UTP4;nc|ENSG00000141076|Q969X6-3|UTP4	65.80317337860623	0.1652391959156183	2				NaN	NaN	0	NaN	11361	4700	16062
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16064	42.395	NaN	2093.4	30	0	379.38	0.034	+			44931	TVALLLAGLV	10	54	485.32052114703544	968.6264893608709	2	485.8226318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVALLLAGLV_	LVRN|p.A14T|1|0.27|ENSG00000172901|chr5:115962657-115962657|G/A|missense_variant	29.14955571784316	0.6417842315402807	2				NaN	NaN	0	NaN	11362	4700	16062
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16072	42.415	NaN	1035.1	30	0	86.568	0.142	+			42393	TAIVDKIGF	9	44	482.2795407848574	NaN	0	482.2792663574219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAIVDKIGF_	ENSG00000205339|ENST00000379719|IPO7;IPO7|p.D430Mfs*6|1|0.18|ENSG00000205339|chr11:9425208-9425208|A/-|frameshift_variant;IPO7|p.M511Cfs*3|1|0.19|ENSG00000205339|chr11:9429134-9429134|A/-|frameshift_variant	54.776311868738084	0.17377682019723872	2				NaN	NaN	0	NaN	11367	4703	16071
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16083	42.463	NaN	1780.7	30	0	112.02	0.139				-1	 	0	56	369.2118658452989	736.4091787573979	2	369.2120056152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11369	4712	16082
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16088	42.48	NaN	3654.2	30	0	288.55	0.143	+			41102	SVINVFVGR	9	62	495.78982822640063	989.5651035196013	2	495.7912292480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVINVFVGR_	ENSG00000135540|ENST00000343505|NHSL1;nc|ENSG00000135540|Q5SYE7|NHSL1;NHSL1|p.E1312Gfs*27|1|0.12|ENSG00000135540|chr6:138430422-138430423|-/C|frameshift_variant;NHSL1|p.I1199Ffs*26|1|0.44|ENSG00000135540|chr6:138430763-138430763|G/-|frameshift_variant;NHSL1|p.P932Rfs*70|1|0.13|ENSG00000135540|chr6:138431562-138431562|G/-|frameshift_variant	101.25262130126117	0.03792372629710479	2				NaN	NaN	0	NaN	11371	4715	16087
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16093	42.496	NaN	2306.8	30	0	365.57	0.214	+			7205	DAIRLAVSY	9	59	504.2791624966147	1006.5437720600294	2	504.2796936035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DAIRLAVSY_	ENSG00000079974|ENST00000691320|RABL2B;ENSG00000144134|ENST00000683472|RABL2A;ENST00000436958.5_1_22:51207206-51220648:-|nuORF;ENST00000450954.5_1_2:114386257-114399703:+|nuORF;ENST00000465063.5_1_22:51207206-51208050:-|nuORF;ENST00000486403.1_1_2:114398907-114399703:+|nuORF;ENST00000494909.5_1_2:114398907-114399703:+|nuORF;nc|ENSG00000144134|Q9UBK7-3|RABL2A;nc|ENSG00000144134|Q9UBK7|RABL2A;nc|ENSG00000144134|Q9UNT1-3|RABL2B;nc|ENSG00000144134|Q9UNT1|RABL2B	43.650786325866115	0.37743712540499297	2				NaN	NaN	0	NaN	11373	4718	16092
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16094	42.5	NaN	2670.2	30	0	588.99	0.032				-1	 	0	46	405.80640341131345	809.5982538894269	2	405.8067626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11374	4718	16092
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16104	42.534	NaN	2528.3	30	0	995.24	0.214	+			16680	HIPPGQCCPK	10	62	540.2607800015311	1078.507007069862	2	540.261962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HIPPGQCCPK_	BMPER|p.N305Kfs*25|1|0.05|ENSG00000164619|chr7:34055289-34055290|-/AAATAGAAATT|frameshift_variant;ENSG00000164619|ENST00000649409|BMPER	37.15910966729921	0.575322462179216	2				NaN	NaN	0	NaN	11378	4724	16103
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16105	42.538	NaN	5154.4	30	0	1740.1	0.036	+			30595	QAQEVFFLK	9	72	555.3029920604553	1108.5914311877104	2	555.8060302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QAQEVFFLK_	ENSG00000170248|ENST00000307296|PDCD6IP;ENST00000459659.1_1_3:33863478-33868168:+|nuORF;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP;nc|ENSG00000170248|Q8WUM4-3|PDCD6IP;PDCD6IP|p.F351Nfs*37|1|0.08|ENSG00000170248|chr3:33836259-33836260|-/AATCC|frameshift_variant	39.252832667884924	0.4290233611298554	2				NaN	NaN	0	NaN	11379	4724	16103
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16114	42.569	NaN	3194.4	30	0	874.56	0.143	+			18287	IPNEIIHAL	9	60	510.2976741467117	1018.5807953602234	2	510.2981872558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IPNEIIHAL_	ENSG00000099783|ENST00000325495|HNRNPM;HNRNPM|p.M346Wfs*22|1|0.25|ENSG00000099783|chr19:8473699-8473699|A/-|frameshift_variant	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	11382	4730	16113
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16133	42.637	NaN	2042	30	0	213.64	0.214	+			29277	NYIEKVVAI	9	61	524.8051348799905	1047.595716826781	2	524.8057861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NYIEKVVAI_	ENSG00000136754|ENST00000376140|ABI1;nc|ENSG00000136754|Q8IZP0-10|ABI1;nc|ENSG00000136754|Q8IZP0-11|ABI1;nc|ENSG00000136754|Q8IZP0-12|ABI1;nc|ENSG00000136754|Q8IZP0-2|ABI1;nc|ENSG00000136754|Q8IZP0-3|ABI1;nc|ENSG00000136754|Q8IZP0-4|ABI1;nc|ENSG00000136754|Q8IZP0-5|ABI1;nc|ENSG00000136754|Q8IZP0-6|ABI1;nc|ENSG00000136754|Q8IZP0-7|ABI1;nc|ENSG00000136754|Q8IZP0-8|ABI1;nc|ENSG00000136754|Q8IZP0|ABI1	54.776311868738084	0.25715957988447635	2				NaN	NaN	0	NaN	11389	4742	16132
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16134	42.641	NaN	1301.8	30	0	172.16	0.106	+			42614	TATSVQDVF	9	52	484.239751063852	966.464949194504	2	484.2399597167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TATSVQDVF_	ENSG00000167861|ENST00000425042|HID1;ENST00000528902.1_1_17:72960370-72968856:-|nuORF;HID1|p.L141Wfs*62|1|0.54|ENSG00000167861|chr17:74963048-74963048|G/-|frameshift_variant;HID1|p.P773Lfs*8|1|0.17|ENSG00000167861|chr17:74951619-74951619|G/-|frameshift_variant;nc|ENSG00000167861|Q8IV36-2|HID1	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	11390	4742	16132
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16135	42.643	NaN	1426.9	30	0	99.741	0.032	+			24614	LGRVSHIKDF	10	47	391.2250614237791	NaN	0	391.2251892089844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LGRVSHIKDF_	nc|ENSG00000173960|P68543-2|UBXN2A	21.68575002086885	0.4201028297492154	2				NaN	NaN	0	NaN	11391	4742	16132
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16144	42.664	NaN	1314.3	30	0	116.26	0.215	+			38020	SPNAIFKAL	9	57	480.77911131839494	NaN	0	480.77874755859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SPNAIFKAL_	ENSG00000125398|ENST00000245479|SOX9;SOX9|p.A379Gfs*5|1|0.71|ENSG00000125398|chr17:72123990-72123991|-/GG|frameshift_variant;SOX9|p.D274Wfs*6|1|0.18|ENSG00000125398|chr17:72123673-72123674|-/GT|frameshift_variant;SOX9|p.D290Rfs*6|1|0.39|ENSG00000125398|chr17:72123723-72123724|-/C|frameshift_variant;SOX9|p.E293Qfs*4|1|0.58|ENSG00000125398|chr17:72123728-72123729|-/TCAA|frameshift_variant;SOX9|p.E388*|1|0.21|ENSG00000125398|chr17:72124012-72124054|GAGCAGCGAGCCGGGCCAGTCCCAGCGAACGCACATCAAGACG/-|frameshift_variant;SOX9|p.F423Sfs*47|1|0.36|ENSG00000125398|chr17:72124124-72124124|T/-|frameshift_variant;SOX9|p.G233Afs*20|1|0.34|ENSG00000125398|chr17:72123553-72123553|G/-|frameshift_variant;SOX9|p.G256Rfs*24|1|0.34|ENSG00000125398|chr17:72123617-72123618|-/GA|frameshift_variant;SOX9|p.G390Rfs*14|1|0.67|ENSG00000125398|chr17:72124021-72124022|-/CC|frameshift_variant;SOX9|p.H396Rfs*8|1|0.11|ENSG00000125398|chr17:72124040-72124041|-/CG|frameshift_variant;SOX9|p.H413Lfs*58|1|0.37|ENSG00000125398|chr17:72124094-72124095|-/TG|frameshift_variant;SOX9|p.I435Sfs*35|1|0.25|ENSG00000125398|chr17:72124157-72124157|C/-|frameshift_variant;SOX9|p.P237Tfs*14|1|0.31|ENSG00000125398|chr17:72123564-72123565|CC/-|frameshift_variant;SOX9|p.P258Gfs*23|1|0.62|ENSG00000125398|chr17:72123621-72123622|-/GGGGC|frameshift_variant;SOX9|p.P307Cfs*77|1|0.27|ENSG00000125398|chr17:72123772-72123773|-/GT|frameshift_variant;SOX9|p.P374Rfs*9|1|0.38|ENSG00000125398|chr17:72123974-72123974|C/-|frameshift_variant;SOX9|p.Q416Nfs*54|1|0.48|ENSG00000125398|chr17:72124100-72124100|C/-|frameshift_variant;SOX9|p.R257Afs*39|3|0.16|ENSG00000125398|chr17:72123621-72123622|-/G|frameshift_variant;SOX9|p.R257Gfs*23|1|0.54|ENSG00000125398|chr17:72123621-72123622|-/GG|frameshift_variant;SOX9|p.R264Qfs*32|1|0.69|ENSG00000125398|chr17:72123639-72123640|-/G|frameshift_variant;SOX9|p.S408Tfs*64|1|0.62|ENSG00000125398|chr17:72124072-72124073|-/CACTA|frameshift_variant;SOX9|p.S448*|1|0.34|ENSG00000125398|chr17:72124200-72124201|CC/-|frameshift_variant;SOX9|p.T243Pfs*10|1|0.44|ENSG00000125398|chr17:72123576-72123576|C/-|frameshift_variant;SOX9|p.V291Afs*92|1|0.55|ENSG00000125398|chr17:72123729-72123729|T/-|frameshift_variant;SOX9|p.V306Cfs*77|2|0.32|ENSG00000125398|chr17:72123769-72123769|G/-|frameshift_variant	47.657333605630114	0.2228375344433429	2				NaN	NaN	0	NaN	11397	4745	16143
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16145	42.668	NaN	1492.6	30	0	170.01	0.034	+			27545	MPDLAHVM	8	47	457.2171303438109	912.4197077544218	2	457.216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MPDLAHVM_	ENSG00000138032|ENST00000282412|PPM1B;ENST00000488866.1_1_2:44445059-44445709:+|nuORF;nc|ENSG00000138032|O75688-2|PPM1B;nc|ENSG00000138032|O75688-3|PPM1B;nc|ENSG00000138032|O75688-4|PPM1B;PPM1B|p.N346Ifs*25|1|0.12|ENSG00000138032|chr2:44218036-44218036|A/-|frameshift_variant	52.29916861842294	0.578018602984656	2				NaN	NaN	0	NaN	11398	4745	16143
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16152	42.686	NaN	1417.6	30	0	202.39	0.214	+			18468	ISFGAFVAK	9	60	470.2685887032712	938.5226244733424	2	470.2687683105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ISFGAFVAK_	ENSG00000143384|ENST00000369026|MCL1	62.107414245175825	0.1960472003779324	2				NaN	NaN	0	NaN	11402	4748	16151
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16153	42.69	NaN	1287.9	30	0	185.36	0.037			+	29519	PDSRPQLTPN	10	47	562.7879524359455	NaN	0	562.787353515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PDSRPQLTPN_	REV__ENSG00000175514|ENST00000312457|GPR152	44.377184641726394	0.34115073642966565	2				NaN	NaN	0	NaN	11403	4748	16151
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16158	42.704	NaN	1630	30	0	329.13	0.214	+			24177	LEPKVALL	8	52	441.7864291538451	881.5583053744903	2	441.7867126464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LEPKVALL_	CASP8AP2|p.D1810Mfs*3|1|0.43|ENSG00000118412|chr6:89868711-89868711|A/-|frameshift_variant;CASP8AP2|p.E1628Mfs*58|1|0.49|ENSG00000118412|chr6:89868163-89868164|-/AT|frameshift_variant;CASP8AP2|p.N1236Ifs*9|1|0.3|ENSG00000118412|chr6:89866990-89866990|A/-|frameshift_variant;CASP8AP2|p.N1917Kfs*4|1|0.24|ENSG00000118412|chr6:89869034-89869035|-/A|frameshift_variant;ENSG00000118412|ENST00000551025|CASP8AP2;ENST00000237177.10_1_6:90556308-90583533:+|nuORF;nc|ENSG00000118412|Q9UKL3|CASP8AP2	65.80317337860623	0.44433089765398776	2				NaN	NaN	0	NaN	11405	4751	16157
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16159	42.708	NaN	3005.3	30	0	496.75	0.034			+	31485	QLCGKTDPI	9	53	487.7522262362661	973.4898995393322	2	487.7533264160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QLCGKTDPI_	REV__ENSG00000168067|ENST00000294066|MAP4K2;REV__ENST00000470088.5_1_11:64559674-64564762:-|nuORF;REV__ENST00000489952.5_1_11:64559674-64566943:-|nuORF;REV__MAP4K2|p.G667Lfs*24|1|0.38|ENSG00000168067|chr11:64792003-64792004|-/AC|frameshift_variant;REV__nc|ENSG00000168067|Q12851-2|MAP4K2	63.53385203322761	0.18415635464017938	2				NaN	NaN	0	NaN	11406	4751	16157
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16174	42.749	NaN	2444.8	30	0	175.97	0.214	+			36280	SEPPVYANL	9	59	495.2504198147194	988.4862866962388	2	495.2506103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEPPVYANL_	ENSG00000177606|ENST00000371222|JUN;JUN|p.R257Kfs*53|1|0.31|ENSG00000177606|chr1:58782301-58782302|-/T|frameshift_variant	39.252832667884924	0.4290233611298554	2				NaN	NaN	0	NaN	11415	4757	16173
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16175	42.753	NaN	1117.3	30	0	164.57	0.106			+	38066	SPSNLIADTAY	11	46	576.2854080082996	NaN	0	576.2852172851562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SPSNLIADTAY_	REV__ENSG00000145934|ENST00000518659|TENM2;REV__nc|ENSG00000145934|Q9NT68-2|TENM2;REV__TENM2|p.L1667Hfs*17|1|0.05|ENSG00000145934|chr5:168218890-168218891|-/ATCAGCGT|frameshift_variant	35.15202426646627	0.40875833226131825	2				NaN	NaN	0	NaN	11416	4757	16173
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16176	42.754	NaN	1235.2	30	0	82.207	0.035	+			27613	MPNVKVAVF	9	54	502.7837914517324	1003.5530299702648	2	502.7833557128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MPNVKVAVF_	DDX39B|p.F149Lfs*13|4|0.27|ENSG00000198563|chr6:31536669-31536669|A/-|frameshift_variant;ENSG00000198563|ENST00000396172|DDX39B;ENST00000481456.1_1_6:31503008-31508408:-|nuORF;nc|ENSG00000198563|Q13838-2|DDX39B	58.22992032128504	0.22837015374068087	2				NaN	NaN	0	NaN	11417	4757	16173
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16183	42.772	NaN	4472	30	0	537.28	0.143	+			28775	NPEIEKKY	8	66	510.7716296106742	1019.5287062881484	2	510.7730712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NPEIEKKY_	ENSG00000100483|ENST00000395860|VCPKMT;nc|ENSG00000100483|Q9H867-2|VCPKMT;nc|ENSG00000100483|Q9H867-5|VCPKMT;VCPKMT|p.K180E|1|0.05|ENSG00000100483|chr14:50114317-50114317|T/C|missense_variant	79.71258880314673	0.32596852995588826	2				NaN	NaN	0	NaN	11421	4760	16182
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16192	42.795	NaN	2937.8	30	0	464.1	0.142	+			38152	SQANIAQVL	9	48	472.26399831377194	942.5134436943439	2	472.2637634277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SQANIAQVL_	AP2B1|p.N760Ifs*17|1|0.37|ENSG00000006125|chr17:35674314-35674314|A/-|frameshift_variant;ENSG00000006125|ENST00000610402|AP2B1;ENSG00000100280|ENST00000357586|AP1B1;ENST00000441188.2_1_X:92478653-92479352:-|nuORF;nc|ENSG00000006125|P63010-3|AP2B1;nc|ENSG00000006125|P63010|AP2B1;nc|ENSG00000100280|Q10567-2|AP1B1;nc|ENSG00000100280|Q10567-3|AP1B1;nc|ENSG00000100280|Q10567-4|AP1B1	72.87924865735499	0.12833875048249987	2				NaN	NaN	0	NaN	11427	4763	16191
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16203	42.822	NaN	1408.3	30	0	78.192	0.144	+			30153	PSDITIYHL	9	62	529.7807981623674	NaN	0	529.780517578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PSDITIYHL_	ENSG00000104133|ENST00000261866|SPG11;nc|ENSG00000104133|Q96JI7-2|SPG11;nc|ENSG00000104133|Q96JI7-3|SPG11	94.00642277110589	0.0335199496031268	2				NaN	NaN	0	NaN	11435	4766	16202
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16209	42.84	NaN	2064.3	30	0	302.68	0.214	+			30704	QDEKPLKY	8	63	510.7716296106742	1019.5287062881484	2	510.7722473144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QDEKPLKY_	ENSG00000189134|ENST00000343684|NKAPL;NKAPL|p.A299V|1|0.24|ENSG00000189134|chr6:28260267-28260267|C/T|missense_variant	66.42927471994793	0.4381325844043345	2				NaN	NaN	0	NaN	11438	4769	16208
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16210	42.844	NaN	909.41	30	0	92.87	0.034			+	11846	FTAKAIEGM	9	52	484.2493846308081	NaN	0	484.24951171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FTAKAIEGM_	REV__CLINT1|p.E55Tfs*26|1|0.04|ENSG00000113282|chr5:157816813-157816814|TC/-|frameshift_variant;REV__CLINT1|p.Q56Yfs*9|1|0.1|ENSG00000113282|chr5:157816811-157816812|-/AAGGTGTA|frameshift_variant;REV__ENSG00000113282|ENST00000411809|CLINT1;REV__nc|ENSG00000113282|Q14677-2|CLINT1;REV__nc|ENSG00000113282|Q14677-3|CLINT1	65.46538089061403	0.1260090208616529	2				NaN	NaN	0	NaN	11439	4769	16208
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16222	42.891	NaN	1293.1	30	0	62.681	0.139				-1	 	0	51	369.2118658452989	736.4091787573979	2	369.2121887207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11442	4778	16221
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16249	42.983	NaN	1547.7	30	0	72.67	0.14	+			18149	ILNLMALLCAP	11	55	391.2251364499053	NaN	0	391.2255859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ILNLMALLCAP_	ENSG00000215029|ENST00000642911|TCP11X2;ENSG00000268235|ENST00000622971|TCP11X1;nc|ENSG00000268235|B4DZS4-2|TCP11X1	26.063383197487333	0.44926255568796863	2				NaN	NaN	0	NaN	11454	4793	16248
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16255	43.001	NaN	1964	30	0	373.8	0.214			+	33645	RMKVCQATY	9	55	550.2745482158998	1098.5345434985995	2	550.77783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RMKVCQATY_	REV__nc|ENSG00000174678|A6NHR8|FAM47DP	34.172542307311794	0.4838870758800184	2				NaN	NaN	0	NaN	11457	4796	16254
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16256	43.005	NaN	1184.2	30	0	205.24	0.033	+			17391	IAPNGALQL	9	46	448.7632994469632	895.5120459607264	2	448.7626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IAPNGALQL_	ATF1|p.T261Lfs*2|1|0.16|ENSG00000123268|chr12:50819740-50819740|A/-|frameshift_variant;ENSG00000123268|ENST00000262053|ATF1	68.78682469695295	0.14603441672067394	2				NaN	NaN	0	NaN	11458	4796	16254
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16275	43.06	NaN	2021.5	30	0	344.42	0.214	+			8653	EDNNLWAI	8	50	487.73214598608064	973.4497390389613	2	487.73272705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EDNNLWAI_	ENST00000404612.1_1_6:26322106-26322214:-|nuORF	38.80614096846853	0.6637206697844082	2				NaN	NaN	0	NaN	11468	4805	16274
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16276	43.064	NaN	967.4	30	0	129.91	0.035			+	11817	FSTVAADVAI	10	42	497.26664250176555	NaN	0	497.2672424316406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FSTVAADVAI_	REV__ENST00000426297.1_3_2:241545901-241546006:+|nuORF	27.882242232435846	0.4086243523356342	2				NaN	NaN	0	NaN	11469	4805	16274
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16283	43.082	NaN	3795.3	30	0	897.52	0.214	+			11635	FQGASNLTL	9	53	475.75049651657315	949.4864400999463	2	475.75146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FQGASNLTL_	DDX18|p.K110Efs*11|1|0.42|ENSG00000088205|chr2:117817678-117817679|-/A|frameshift_variant;ENSG00000088205|ENST00000263239|DDX18	98.58198989935565	0.04066992115528678	2				NaN	NaN	0	NaN	11473	4808	16282
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16284	43.086	NaN	1703	30	0	249.97	0.034	+			29891	PLLPSVLGPA	10	50	482.2968873095665	962.579221685933	2	482.2978820800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PLLPSVLGPA_	ENSG00000161847|ENST00000617231|RAVER1;nc|ENSG00000161847|Q8IY67-2|RAVER1;nc|ENSG00000161847|Q8IY67|RAVER1	45.9519527083369	0.4943008177357963	2				NaN	NaN	0	NaN	11474	4808	16282
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16298	43.125	NaN	9058.3	30	0	2468.6	0.214	+			2319	AMLDTVVFK	9	74	512.2803102583084	1022.5460675834169	2	512.2807006835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AMLDTVVFK_	ENSG00000115233|ENST00000409682|PSMD14;ENST00000477232.5_1_2:162241962-162267908:+|nuORF;ENST00000492908.1_1_2:162265323-162267908:+|nuORF	124.08010499294276	0.018729767491916592	2				NaN	NaN	0	NaN	11482	4814	16297
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16299	43.129	NaN	2175.9	30	0	154.64	0.106	+			45593	TYPAELNNI	9	64	517.7613200318496	1033.508087130499	2	517.76123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TYPAELNNI_	ENSG00000106546|ENST00000242057|AHR	139.97047562133406	0.010493916756945389	2				NaN	NaN	0	NaN	11483	4814	16297
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16300	43.131	NaN	2977.4	30	0	579.04	0.035	+			48085	VSSWLPLAK	9	63	500.79461355248156	999.5746741717631	2	500.79449462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSSWLPLAK_	ENSG00000103591|ENST00000261880|AAGAB;ENST00000558725.5_1_15:67519241-67546969:-|nuORF	62.107414245175825	0.1960472003779324	2				NaN	NaN	0	NaN	11484	4814	16297
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16304	43.145	NaN	1502.4	30	0	248.02	0.214			+	26578	LTTNSFLH	8	50	466.7450112523976	NaN	0	466.7454833984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LTTNSFLH_	REV__ENST00000470045.1_1_10:22605346-22607030:+|nuORF	55.50420428727701	1.7418937515398478	2				NaN	NaN	0	NaN	11485	4817	16303
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16305	43.149	NaN	1175.8	30	0	357.82	0.035				-1	IRCEGMTL	8	37	498.2375852222642	NaN	0	498.23736572265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_IRC(Carbamidomethyl (C))EGM(Oxidation (M))TL_	ENSG00000135899|ENST00000258381|SP110;ENST00000489597.1_1_2:231042247-231042924:-|nuORF;nc|ENSG00000135899|Q9HB58-2|SP110;nc|ENSG00000135899|Q9HB58-3|SP110;nc|ENSG00000135899|Q9HB58-4|SP110;nc|ENSG00000135899|Q9HB58-5|SP110;nc|ENSG00000135899|Q9HB58-7|SP110;nc|ENSG00000135899|Q9HB58|SP110	34.172542307311794	1.7418937515398478	2				NaN	NaN	0	NaN	11486	4817	16303
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16315	43.18	NaN	1114.9	30	0	93.886	0.141	+			4709	ATLTVMVI	8	48	432.24866249249243	862.4827720517849	2	432.24859619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ATLTVM(Oxidation (M))VI_	DCHS1|p.G2765Rfs*10|1|0.26|ENSG00000166341|chr11:6623383-6623384|-/T|frameshift_variant;DCHS1|p.H2834Sfs*7|1|0.44|ENSG00000166341|chr11:6623177-6623178|-/C|frameshift_variant;ENSG00000166341|ENST00000299441|DCHS1	74.51659920185547	0.36926395944126233	2				NaN	NaN	0	NaN	11490	4823	16314
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16320	43.196	NaN	1326.9	30	0	127.51	0.144	+			42456	TAMDVVYALK	10	54	555.7967247412697	1109.5788965493393	2	555.7974243164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAMDVVYALK_	ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2	49.536043120802724	0.461275219792494	2				NaN	NaN	0	NaN	11492	4826	16319
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16325	43.213	NaN	1386.9	30	0	192.67	0.145	+			30638	QASTVVTYVY	10	44	565.7897680542467	1129.5649831752933	2	565.7898559570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QASTVVTYVY_	ENSG00000111237|ENST00000549578|VPS29;nc|ENSG00000111237|Q9UBQ0-2|VPS29	51.19269402634007	0.44601001148513897	2				NaN	NaN	0	NaN	11494	4829	16324
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16332	43.245	NaN	915.93	30	0	76.72	0.139	+			6275	AVSQLFLSLQ	10	42	369.2119680789045	NaN	0	369.212158203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVSQLFLSLQ_	ENST00000420488.5_1_20:30310076-30311747:-|nuORF	19.262678746197807	0.4201028297492154	2				NaN	NaN	0	NaN	11495	4835	16331
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16348	43.312	NaN	1853.5	30	0	418.78	0.144	+			15548	GVFEYFNAK	9	61	537.7662522017072	1073.5179514702143	2	537.7666625976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVFEYFNAK_	ENSG00000102699|ENST00000381989|PARP4	54.776311868738084	0.25715957988447635	2				NaN	NaN	0	NaN	11499	4847	16347
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16363	43.364	NaN	1083.9	30	0	114.16	0.215	+			19494	KATGKLIAQG	10	48	493.80545255014545	NaN	0	493.80560302734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KATGKLIAQG_	ENSG00000112304|ENST00000230048|ACOT13;nc|ENSG00000112304|Q9NPJ3-2|ACOT13	58.22992032128504	0.24873293749302264	2				NaN	NaN	0	NaN	11505	4856	16362
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16364	43.368	NaN	905.3	30	0	67.759	0.032	+			29617	PGAGARPR	8	45	391.2248491277854	780.4351453223708	2	391.22503662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PGAGARPR_	ENSG00000119688|ENST00000356924|ABCD4;ENST00000477803.5_1_14:74764631-74769615:-|nuORF;ENST00000489207.1_1_14:74766721-74769615:-|nuORF;ENST00000493752.5_1_14:74766202-74769615:-|nuORF;ENST00000557554.5_1_14:74757154-74769615:-|nuORF	14.664097394203935	0.7913966407026132	2				NaN	NaN	0	NaN	11506	4856	16362
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16373	43.398	NaN	1867.5	30	0	172.08	0.144	+			1887	AIMDPLPLR	9	65	513.294472706529	1024.5743924798578	2	513.2955322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AIMDPLPLR_	AHR|p.D549Vfs*28|1|0.18|ENSG00000106546|chr7:17339471-17339474|ATTT/-|frameshift_variant;AHR|p.F562Sfs*16|1|0.24|ENSG00000106546|chr7:17339506-17339506|T/-|frameshift_variant;ENSG00000106546|ENST00000242057|AHR	98.62937762414208	0.04060045538121712	2				NaN	NaN	0	NaN	11509	4862	16372
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16379	43.417	NaN	3479.9	30	0	725.35	0.143	+			10681	EYTAKIALL	9	61	511.3001611947041	1020.5857694562083	2	511.3005065917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EYTAKIALL_	ENSG00000092820|ENST00000367075|EZR	102.7733458925114	0.03637199559902695	2				NaN	NaN	0	NaN	11512	4865	16378
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16394	43.483	NaN	574.53	30	0	75.825	0.143			+	-1	DKTMGSLLY	9	33	522.258056640625	NaN	0	522.258056640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_DKTM(Oxidation (M))GSLLY_	REV__tr|U7SZQ6|U7SZQ6_FUSNUphosphoserinephosphataseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00833PE=4SV=1	29.14955571784316	0.3303970763161698	2				NaN	NaN	0	NaN	11515	4877	16393
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16399	43.499	NaN	1515	30	0	104.24	0.14				-1	 	0	56	413.23775675445455	824.4609605757091	2	413.2382507324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11517	4880	16398
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16427	43.604	NaN	17153	30	0	3217.6	0.144				-1	 	0	72	547.7984887547344	1093.5824245762687	2	547.8004760742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11527	4898	16426
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16442	43.656	NaN	1215.7	30	0	196.69	0.144	+			25666	LRDCMKKL	8	51	540.2891188660897	1078.5636847989792	2	540.2902221679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_LRDC(Carbamidomethyl (C))M(Oxidation (M))KKL_	ENSG00000118733|ENST00000370103|OLFM3;nc|ENSG00000118733|Q96PB7-2|OLFM3;nc|ENSG00000118733|Q96PB7-4|OLFM3;nc|ENSG00000118733|Q96PB7-5|OLFM3;nc|ENSG00000118733|Q96PB7-6|OLFM3;nc|ENSG00000118733|Q96PB7|OLFM3	90.77665401227738	0.27511901818546464	2				NaN	NaN	0	NaN	11533	4907	16441
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16447	43.673	NaN	2437.1	30	0	1002.5	0.145	+			32588	QYESKVFYL	9	57	588.800100995406	1175.5856490576118	2	588.8007202148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QYESKVFYL_	ENSG00000128245|ENST00000248975|YWHAH;ENSG00000170027|ENST00000307630|YWHAG;ENST00000397492.1_1_22:32346295-32352776:+|nuORF	52.936696900407355	0.27249468807391813	2				NaN	NaN	0	NaN	11535	4910	16446
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16457	43.707	NaN	3857.1	30	0	249.13	0.14				-1	 	0	80	391.2248491277854	780.4351453223708	2	391.2249450683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11539	4916	16456
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16474	43.754	NaN	1444	30	0	155.86	0.214	+			39225	STAIQELFK	9	58	518.7873685555018	1035.5601841778034	2	518.7861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STAIQELFK_	ENSG00000104833|ENST00000264071|TUBB4A;ENSG00000137267|ENST00000333628|TUBB2A;ENSG00000137285|ENST00000259818|TUBB2B;ENSG00000176014|ENST00000317702|TUBB6;ENSG00000188229|ENST00000340384|TUBB4B;ENSG00000196230|ENST00000327892|TUBB;ENSG00000258947|ENST00000315491|TUBB3;ENST00000417736.2_1_18:12308439-12326126:+|nuORF;ENST00000518096.1_1_8:30210219-30210855:+|nuORF;ENST00000604929.1_1_9:140136931-140138005:+|nuORF;nc|ENSG00000258947|Q13509-2|TUBB3	61.691277971877994	0.19951612995419254	2				NaN	NaN	0	NaN	11550	4922	16473
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16475	43.757	NaN	725.45	30	0	72.017	0.036				-1	LRDCMKKL	8	39	540.2891188660897	1078.5636847989792	2	540.7908325195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_LRDC(Carbamidomethyl (C))M(Oxidation (M))KKL_	ENSG00000118733|ENST00000370103|OLFM3;nc|ENSG00000118733|Q96PB7-2|OLFM3;nc|ENSG00000118733|Q96PB7-4|OLFM3;nc|ENSG00000118733|Q96PB7-5|OLFM3;nc|ENSG00000118733|Q96PB7-6|OLFM3;nc|ENSG00000118733|Q96PB7|OLFM3	44.116797842482775	0.6307669463330267	2				NaN	NaN	0	NaN	11551	4922	16473
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16498	43.842	NaN	1666.6	30	0	307.04	0.214			+	47154	VLSACTILVL	10	56	544.8211438796433	1087.6277348260865	2	544.8225708007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_VLSAC(Carbamidomethyl (C))TILVL_	REV__ENSG00000121270|ENST00000356608|ABCC11;REV__ENST00000567385.5_1_16:48244807-48265838:-|nuORF;REV__nc|ENSG00000121270|Q96J66-2|ABCC11	44.116797842482775	0.5112108506279902	2				NaN	NaN	0	NaN	11559	4937	16497
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16499	43.845	NaN	1483.3	30	0	97.203	0.032				-1	 	0	51	413.23775675445455	824.4609605757091	2	413.23846435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11560	4937	16497
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16504	43.86	NaN	1157.1	30	0	155.42	0.214	+			46686	VGIDIFTGK	9	48	475.2709045410156	NaN	0	475.2709045410156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VGIDIFTGK_	EIF5AL1|p.K68T|1|0.33|ENSG00000253626|chr10:79512852-79512852|A/C|missense_variant;EIF5AL1|p.L114Sfs*3|1|0.07|ENSG00000253626|chr10:79512986-79512987|-/G|frameshift_variant;ENSG00000132507|ENST00000336458|EIF5A;ENSG00000163577|ENST00000295822|EIF5A2;ENSG00000253626|ENST00000520547|EIF5AL1;nc|ENSG00000132507|P63241-2|EIF5A	41.42661286455405	0.26577678759562784	2				NaN	NaN	0	NaN	11562	4940	16503
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16505	43.863	NaN	285.4	30	0	123.44	0.106			+	-1	CKCPGVPW	8	16	335.1542663574219	NaN	0	335.1542663574219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))KC(Carbamidomethyl (C))PGVPW_	REV__ENST00000560334.5_1_15:79271198-79356973:-|nuORF	19.359975847455235	1.7418937515398478	2				NaN	NaN	0	NaN	11563	4940	16503
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16506	43.865	NaN	286.61	30	0	82.957	0.106				-1	 	0	19	327.1649214154337	652.3152898976674	2	327.1654052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11564	4940	16503
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16507	43.867	NaN	392.1	30	0	45.298	0.031	+			12290	GCEPGGAP	8	27	344.1406716397504	NaN	0	344.1404113769531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GCEPGGAP_	ENST00000282096.8_1_11:14665308-14793517:+|nuORF	16.704963439144045	1.7418937515398478	2				NaN	NaN	0	NaN	11565	4940	16503
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16524	43.934	NaN	1722.7	30	0	322.69	0.214	+			31821	QPQQTFNIY	9	57	569.7799913464224	1137.5454297596448	2	569.7813720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QPQQTFNIY_	ENSG00000010327|ENST00000321725|STAB1;ENST00000481607.1_1_3:52529402-52542549:+|nuORF;nc|ENSG00000010327|Q9NY15-2|STAB1;STAB1|p.E1712Rfs*8|1|0.12|ENSG00000010327|chr3:52519356-52519357|-/C|frameshift_variant;STAB1|p.F2001Lfs*111|1|0.35|ENSG00000010327|chr3:52521452-52521452|T/-|frameshift_variant;STAB1|p.G1507Afs*84|1|0.26|ENSG00000010327|chr3:52517346-52517346|G/-|frameshift_variant;STAB1|p.L1057Sfs*33|1|0.28|ENSG00000010327|chr3:52513135-52513136|-/T|frameshift_variant;STAB1|p.P978Lfs*57|1|0.35|ENSG00000010327|chr3:52512385-52512385|C/-|frameshift_variant;STAB1|p.R1122Pfs*37|1|0.37|ENSG00000010327|chr3:52513891-52513892|-/C|frameshift_variant;STAB1|p.V800Cfs*113|1|0.34|ENSG00000010327|chr3:52509914-52509914|G/-|frameshift_variant	44.377184641726394	0.36891676396732553	2				NaN	NaN	0	NaN	11570	4952	16523
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16525	43.937	NaN	626.83	30	0	89.37	0.034				-1	MAVKSWVP	8	36	467.24835704643317	NaN	0	467.2484130859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_M(Oxidation (M))AVKSWVP_	ENST00000382313.2_1_16:2787232-2787705:-|nuORF;ENST00000573802.1_1_16:2787232-2793608:-|nuORF	37.15910966729921	1.7418937515398478	2				NaN	NaN	0	NaN	11571	4952	16523
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16532	43.955	NaN	1680.9	30	0	253.61	0.144				-1	 	0	54	547.7984887547344	1093.5824245762687	2	547.802490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11575	4955	16531
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16546	43.996	NaN	1760.6	30	0	372.95	0.214	+			27109	MAPARLFAL	9	53	503.2811933301785	1004.547833727157	2	503.2808837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))APARLFAL_	ENSG00000124145|ENST00000372733|SDC4;nc|ENSG00000124145|P31431-2|SDC4	65.80317337860623	0.1652391959156183	2				NaN	NaN	0	NaN	11583	4961	16545
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16547	44	NaN	2199.5	30	0	203.38	0.036	+			28032	NAAKIFNLY	9	60	527.2900693086731	1052.565585684146	2	527.2903442382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NAAKIFNLY_	DPYSL3|p.A516Qfs*15|1|0.31|ENSG00000113657|chr5:147395638-147395638|G/-|frameshift_variant;ENSG00000072832|ENST00000324989|CRMP1;ENSG00000113657|ENST00000343218|DPYSL3;ENSG00000147647|ENST00000351513|DPYS;ENST00000506216.5_1_4:5749932-5890196:-|nuORF;ENST00000511535.1_1_4:5823489-5889136:-|nuORF;nc|ENSG00000072832|Q14194|CRMP1;nc|ENSG00000113657|Q14195|DPYSL3	99.37495909608758	0.03983967222258828	2				NaN	NaN	0	NaN	11584	4961	16545
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16561	44.05	NaN	2761.5	30	0	146.24	0.214	+			15578	GVHAKRGG	8	57	391.2248491277854	780.4351453223708	2	391.2254943847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVHAKRGG_	CALN1|p.Y70Vfs*26|1|0.3|ENSG00000183166|chr7:72106205-72106206|-/C|frameshift_variant	21.70233525837049	0.7917639344264583	2				NaN	NaN	0	NaN	11589	4970	16560
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16562	44.054	NaN	2024.4	30	0	334.11	0.106	+			4181	ATFMEVLTK	9	53	520.2785392590482	1038.5425255848963	2	520.279052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATFMEVLTK_	ENSG00000196712|ENST00000358273|NF1;ENST00000493220.5_2_17:29556858-29657521:+|nuORF;ENST00000495910.6_1_17:29490228-29576996:+|nuORF;nc|ENSG00000196712|P21359-2|NF1;nc|ENSG00000196712|P21359-4|NF1;nc|ENSG00000196712|P21359-6|NF1;NF1|p.F2429Qfs*7|1|0.17|ENSG00000196712|chr17:31349214-31349215|-/CAAGTAAGAATTAATT|frameshift_variant;NF1|p.K1386Rfs*20|1|0.33|ENSG00000196712|chr17:31252978-31252978|A/-|frameshift_variant	70.8162118820467	0.13725933411854815	2				NaN	NaN	0	NaN	11590	4970	16560
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16563	44.056	NaN	665.94	30	0	98.444	0.031	+			35631	SCGGPGPN	8	37	344.63955933479315	NaN	0	344.6395568847656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SCGGPGPN_	ENST00000396033.6_1_10:33246721-33246775:-|nuORF	12.959181472943097	1.7418937515398478	2				NaN	NaN	0	NaN	11591	4970	16560
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16575	44.102	NaN	1962.1	30	0	640.36	0.214			+	7407	DEIIKKLAE	9	49	529.8080317242368	1057.6015105152735	2	529.8098754882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DEIIKKLAE_	REV__ENSG00000138385|ENST00000260956|SSB;REV__ENST00000455793.1_1_X:61999306-61999546:+|nuORF	38.753607047826485	0.4348790777924195	2				NaN	NaN	0	NaN	11594	4979	16574
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16576	44.106	NaN	1723.2	30	0	216.69	0.036	+			25394	LPIGDVATQY	10	57	538.784821281194	1075.555089629188	2	538.7857055664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LPIGDVATQY_	ENSG00000135624|ENST00000258091|CCT7;nc|ENSG00000135624|Q99832-2|CCT7;nc|ENSG00000135624|Q99832-3|CCT7;nc|ENSG00000135624|Q99832-4|CCT7	65.46538089061403	0.31613324008013116	2				NaN	NaN	0	NaN	11595	4979	16574
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16601	44.217	NaN	863.92	30	0	111.47	0.138			+	13625	GMGGAAAN	8	30	324.64151699303403	647.2684810528681	2	324.6420593261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GMGGAAAN_	REV__ENST00000223215.8_1_7:130132090-130132144:+|nuORF	15.63621529709179	0.7929342111279789	2				NaN	NaN	0	NaN	11599	5000	16600
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16614	44.267	NaN	974.14	30	0	103.12	0.138			+	12126	GAGGWSGG	8	34	324.64151699303403	647.2684810528681	2	324.64178466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GAGGWSGG_	REV__ENST00000560935.1_1_14:24652387-24652645:-|nuORF	15.63621529709179	0.7929342111279789	2				NaN	NaN	0	NaN	11603	5009	16613
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16635	44.348	NaN	1813.9	30	0	521.09	0.143	+			6624	AYSAKIALF	9	52	492.28161720635853	982.5486814795171	2	492.28143310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AYSAKIALF_	DPYD|p.F707Lfs*4|2|0.3|ENSG00000188641|chr1:97306235-97306235|A/-|frameshift_variant;DPYD|p.L523Sfs*13|1|0.32|ENSG00000188641|chr1:97515899-97515899|G/-|frameshift_variant;ENSG00000188641|ENST00000370192|DPYD;ENST00000474241.1_1_1:98157206-98165091:-|nuORF	74.25504064058377	0.12238981753128622	2				NaN	NaN	0	NaN	11609	5024	16634
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16653	44.416	NaN	1277	30	0	107.75	0.14			+	18388	IRHGGKGG	8	44	391.2248491277854	780.4351453223708	2	391.2252502441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IRHGGKGG_	REV__tr|U7T3R4|U7T3R4_FUSNUGlycerolkinaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=glpKPE=3SV=1	14.664097394203935	0.7913966407026132	2				NaN	NaN	0	NaN	11615	5036	16652
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16657	44.432	NaN	1099.6	30	0	173.44	0.144	+			37913	SPDATIRIW	9	50	529.784737376441	1057.5549218196818	2	529.7858276367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SPDATIRIW_	ENSG00000110107|ENST00000227524|PRPF19;PRPF19|p.S440Hfs*2|1|0.3|ENSG00000110107|chr11:60897945-60897945|A/-|frameshift_variant	72.87924865735499	0.12833875048249987	2				NaN	NaN	0	NaN	11616	5039	16656
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16677	44.515	NaN	919.03	30	0	141.1	0.142			+	23871	LDFKNSLI	8	43	475.27166748046875	NaN	0	475.27166748046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LDFKNSLI_	REV__SCN2A|p.V406Cfs*24|1|0.24|ENSG00000136531|chr2:165313934-165313935|-/T|frameshift_variant	42.396135135203025	1.7418937515398478	2				NaN	NaN	0	NaN	11621	5054	16676
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16689	44.565	NaN	2680.1	30	0	429.97	0.142	+			11981	FVPVANEL	8	43	444.74491329669036	887.4752736601807	2	444.74517822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FVPVANEL_	ENSG00000176658|ENST00000318217|MYO1D	76.84663266511073	0.3498490246073164	2				NaN	NaN	0	NaN	11624	5063	16688
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16705	44.629	NaN	969.63	30	0	68.767	0.142			+	24868	LKETIISK	8	52	466.29499029659075	NaN	0	466.29498291015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LKETIISK_	REV__ENSG00000163918|ENST00000296273|RFC4	45.97224482568171	1.7418937515398478	2				NaN	NaN	0	NaN	11628	5075	16704
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16723	44.698	NaN	1641	30	0	224.68	0.144	+			41029	SVIALFLIQ	9	52	502.3130729062806	1002.6115928793612	2	502.31378173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVIALFLIQ_	ENST00000310528.8_1_13:53262132-53262462:+|nuORF	42.86426827375447	0.38666266728046506	2				NaN	NaN	0	NaN	11634	5087	16722
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16728	44.715	NaN	588.91	30	0	32.002	0.214				-1	LAVFPLVP	8	32	449.2742004394531	NaN	0	449.2742004394531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LAVFPLVP_	ENST00000482143.5_1_1:46649242-46649923:+|nuORF	24.504012794735996	1.7418937515398478	2				NaN	NaN	0	NaN	11636	5090	16727
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16729	44.718	NaN	887.98	30	0	105.96	0.034	+			10831	FASEVSNVL	9	42	483.2503662109375	NaN	0	483.2503662109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FASEVSNVL_	ENSG00000136738|ENST00000377524|STAM;nc|ENSG00000136738|Q92783-2|STAM	31.529811441608018	0.3183796599642538	2				NaN	NaN	0	NaN	11637	5090	16727
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16735	44.735	NaN	1165.4	30	0	223.28	0.143	+			11038	FELRSCLI	8	53	490.7649853144324	NaN	0	490.7649841308594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FELRSCLI_	ENSG00000050438|ENST00000453097|SLC4A8;ENST00000319957.10_1_12:51818771-51890959:+|nuORF;ENST00000547697.6_1_12:51844670-51855120:+|nuORF;nc|ENSG00000050438|Q2Y0W8-2|SLC4A8;nc|ENSG00000050438|Q2Y0W8-3|SLC4A8;nc|ENSG00000050438|Q2Y0W8-4|SLC4A8;nc|ENSG00000050438|Q2Y0W8-5|SLC4A8;nc|ENSG00000050438|Q2Y0W8-6|SLC4A8;nc|ENSG00000050438|Q2Y0W8-7|SLC4A8;nc|ENSG00000050438|Q2Y0W8-8|SLC4A8;SLC4A8|p.F597Lfs*4|1|0.04|ENSG00000050438|chr12:51471417-51471417|T/-|frameshift_variant;SLC4A8|p.I294Ffs*26|1|0.27|ENSG00000050438|chr12:51459969-51459969|A/-|frameshift_variant;SLC4A8|p.N272Mfs*3|1|0.38|ENSG00000050438|chr12:51458605-51458605|A/-|frameshift_variant	56.72105179125745	1.7418937515398478	2				NaN	NaN	0	NaN	11640	5093	16734
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16741	44.753	NaN	1061.7	30	0	86.365	0.14	+			36757	SHKIRAGG	8	51	413.23799655057	824.46144016794	2	413.2381591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SHKIRAGG_	ENSG00000171873|ENST00000379453|ADRA1D	20.481830146152948	0.8005983782650069	2				NaN	NaN	0	NaN	11643	5096	16740
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16745	44.769	NaN	1441.9	30	0	76.287	0.143	+			21014	KKIDGHMY	8	55	496.2571458381346	NaN	0	496.2580871582031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KKIDGHMY_	ENST00000429272.1_1_2:131051524-131051887:+|nuORF	29.14955571784316	1.7418937515398478	2				NaN	NaN	0	NaN	11644	5099	16744
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16749	44.786	NaN	1247.1	30	0	113.77	0.141	+			2765	ARKSHLTG	8	54	435.2512596088391	868.4879662844783	2	435.251220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ARKSHLTG_	ENSG00000204179|ENST00000374339|PTPN20;nc|ENSG00000204179|Q4JDL3-11|PTPN20;nc|ENSG00000204179|Q4JDL3-2|PTPN20;nc|ENSG00000204179|Q4JDL3-3|PTPN20;nc|ENSG00000204179|Q4JDL3-4|PTPN20;nc|ENSG00000204179|Q4JDL3-5|PTPN20;nc|ENSG00000204179|Q4JDL3-6|PTPN20	33.51558372728122	0.7005509609380386	2				NaN	NaN	0	NaN	11645	5102	16748
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16753	44.802	NaN	872.94	30	0	105.57	0.143	+			29217	NVTGIVQVY	9	49	496.7746007015301	991.5346484698603	2	496.7752380371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NVTGIVQVY_	ENSG00000167487|ENST00000300976|KLHL26	31.529811441608018	0.5085848003137583	2				NaN	NaN	0	NaN	11646	5105	16752
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16764	44.851	NaN	1301.1	30	0	313.12	0.141	+			31491	QLDLAQSL	8	40	444.2453976722104	886.4762424112208	2	444.2451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QLDLAQSL_	ENST00000319136.8_1_22:36649172-36649925:+|nuORF;ENST00000358502.9_1_22:36629284-36635600:-|nuORF;ENST00000426053.5_1_22:36649172-36653412:+|nuORF;ENST00000454728.5_1_22:36630327-36635600:-|nuORF;ENST00000473549.1_1_22:36633328-36635709:-|nuORF;ENST00000484830.1_1_22:36633328-36635600:-|nuORF	47.657333605630114	0.6087971902037268	2				NaN	NaN	0	NaN	11648	5114	16763
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16787	44.947	NaN	944.46	30	0	124.9	0.14	+			24578	LGPEGVPL	8	41	391.2256774902344	NaN	0	391.2256774902344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LGPEGVPL_	ENSG00000010327|ENST00000321725|STAB1;ENST00000481607.1_1_3:52529402-52542549:+|nuORF;nc|ENSG00000010327|Q9NY15-2|STAB1;REV__ENST00000526084.1_1_11:7693541-7694179:-|nuORF;STAB1|p.E1712Rfs*8|1|0.12|ENSG00000010327|chr3:52519356-52519357|-/C|frameshift_variant;STAB1|p.F2001Lfs*111|1|0.35|ENSG00000010327|chr3:52521452-52521452|T/-|frameshift_variant;STAB1|p.G1507Afs*84|1|0.26|ENSG00000010327|chr3:52517346-52517346|G/-|frameshift_variant;STAB1|p.L1057Sfs*33|1|0.28|ENSG00000010327|chr3:52513135-52513136|-/T|frameshift_variant;STAB1|p.P978Lfs*57|1|0.35|ENSG00000010327|chr3:52512385-52512385|C/-|frameshift_variant;STAB1|p.R1122Pfs*37|1|0.37|ENSG00000010327|chr3:52513891-52513892|-/C|frameshift_variant;STAB1|p.V800Cfs*113|1|0.34|ENSG00000010327|chr3:52509914-52509914|G/-|frameshift_variant	21.70233525837049	1.7418937515398478	2				NaN	NaN	0	NaN	11653	5132	16786
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16793	44.966	NaN	909.55	30	0	50.422	0.144	+			49546	VYAQVARLF	9	53	533.8055452318264	1065.5965375304527	2	533.8077392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYAQVARLF_	ENSG00000169375|ENST00000394947|SIN3A;ENST00000394947.7_1_15:75702535-75702580:-|nuORF;SIN3A|p.G659Afs*26|1|0.14|ENSG00000169375|chr15:75396375-75396375|C/-|frameshift_variant	99.37495909608758	0.03983967222258828	2				NaN	NaN	0	NaN	11656	5135	16792
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16801	44.998	NaN	1543.5	30	0	155.75	0.143			+	17540	IDRKPQLQ	8	50	499.2924499511719	NaN	0	499.2924499511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IDRKPQLQ_	REV__ENST00000253233.5_1_12:123717606-123717849:+|nuORF	71.29570347882199	1.7418937515398478	2				NaN	NaN	0	NaN	11658	5141	16800
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16811	45.032	NaN	998.97	30	0	122.96	0.142	+			35707	SDLKVILM	8	44	459.76993749273345	917.5253220522669	2	459.7696533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SDLKVILM_	DHX36|p.M705Nfs*20|1|0.33|ENSG00000174953|chr3:154284905-154284906|-/T|frameshift_variant;DHX36|p.R854Efs*4|3|0.36|ENSG00000174953|chr3:154280586-154280586|T/-|frameshift_variant;ENSG00000174953|ENST00000496811|DHX36;nc|ENSG00000174953|Q9H2U1-2|DHX36;nc|ENSG00000174953|Q9H2U1-3|DHX36	42.396135135203025	0.6414440140393314	2				NaN	NaN	0	NaN	11662	5147	16810
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16816	45.049	NaN	1736	30	0	250.27	0.143	+			41030	SVIALFLIQ	9	47	502.3130729062806	1002.6115928793612	2	502.31329345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVIALFLIQ_	ENST00000310528.8_1_13:53262132-53262462:+|nuORF	35.15202426646627	0.4747332964206883	2				NaN	NaN	0	NaN	11664	5150	16815
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16829	45.101	NaN	3271.3	30	0	186.54	0.14				-1	 	0	67	413.23799655057	824.46144016794	2	413.2384033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11668	5159	16828
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16844	45.165	NaN	1584.7	30	0	180.54	0.143	+			46561	VFIPSALAAI	10	52	501.3050446441576	1000.5955363551152	2	501.3052978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VFIPSALAAI_	ENSG00000106771|ENST00000374586|TMEM245;ENST00000482868.1_1_9:111798484-111800393:-|nuORF;nc|ENSG00000106771|Q9H330-3|TMEM245	47.95952297671804	0.47580206326914537	2				NaN	NaN	0	NaN	11671	5171	16843
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16873	45.294	NaN	1575	30	0	243	0.143	+			2096	ALFLTLTTK	9	59	504.3105827383379	1006.6066125434759	2	504.3104248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ALFLTLTTK_	ENSG00000198712|ENST00000361739|MT-CO2	104.0567914643314	0.03506238181059741	2				NaN	NaN	0	NaN	11676	5195	16872
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16896	45.39	NaN	866.96	30	0	76.079	0.214			+	19504	KATTAAPYL	9	43	468.2637836716898	NaN	0	468.26385498046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KATTAAPYL_	REV__ENSG00000161649|ENST00000317310|CD300LG;REV__nc|ENSG00000161649|Q6UXG3-4|CD300LG;REV__nc|ENSG00000161649|Q6UXG3-5|CD300LG	44.116797842482775	0.2472372736944149	2				NaN	NaN	0	NaN	11681	5213	16895
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16897	45.394	NaN	535.01	30	0	68.901	0.033	+			45414	TVVPAAPEL	9	39	448.75844064908114	NaN	0	448.7580871582031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVVPAAPEL_	ENSG00000137337|ENST00000376406|MDC1;nc|ENSG00000137337|Q14676-2|MDC1;nc|ENSG00000137337|Q14676-3|MDC1	29.14955571784316	0.3303970763161698	2				NaN	NaN	0	NaN	11682	5213	16895
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16910	45.443	NaN	2374.7	30	0	139.49	0.214	+			13166	GHARGKTV	8	55	413.23799655057	824.46144016794	2	413.2384338378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GHARGKTV_	ENSG00000130347|ENST00000369063|RTN4IP1;ENST00000493619.1_1_6:107019873-107020229:-|nuORF;nc|ENSG00000130347|Q8WWV3-2|RTN4IP1	16.473147378115264	0.7942579620968672	2				NaN	NaN	0	NaN	11686	5222	16909
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16911	45.447	NaN	1569	30	0	442.51	0.035	+			39433	STEFLALMK	9	49	520.2785041046683	1038.5424552761365	2	520.2799682617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STEFLALMK_	DYNC1H1|p.F2635Lfs*67|1|0.16|ENSG00000197102|chr14:102017141-102017141|T/-|frameshift_variant;DYNC1H1|p.G1902Vfs*27|2|0.27|ENSG00000197102|chr14:102006154-102006154|G/-|frameshift_variant;DYNC1H1|p.K3112Hfs*3|1|0.31|ENSG00000197102|chr14:102027998-102027999|-/TCACAAG|frameshift_variant;DYNC1H1|p.W4201Gfs*43|1|0.42|ENSG00000197102|chr14:102043958-102043958|G/-|frameshift_variant;ENSG00000197102|ENST00000360184|DYNC1H1	62.107414245175825	0.1960472003779324	2				NaN	NaN	0	NaN	11687	5222	16909
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16939	45.549	NaN	1004.3	30	0	370.17	0.139			+	-1	CDLASASFTL	10	28	357.1672370927642	NaN	0	357.1670837402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))CDLASASFTL_	REV__ENST00000371756.3_1_9:138825132-138825180:-|nuORF	20.83715455343099	0.4201028297492154	2				NaN	NaN	0	NaN	11697	5240	16938
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16945	45.567	NaN	926.4	30	0	126.36	0.214			+	-1	VGGPERGRAM	10	39	349.17831743499926	NaN	0	349.1781921386719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_VGGPERGRAM(Oxidation (M))_	REV__ENSG00000072818|ENST00000158762|ACAP1;REV__ENST00000570439.1_1_17:7250283-7250895:+|nuORF	23.52269567125451	0.42010282974921537	2				NaN	NaN	0	NaN	11700	5243	16944
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16946	45.57	NaN	1038.3	30	0	59.825	0.031	+			8264	EAGPQGCA	8	41	366.6528674094131	NaN	0	366.6525573730469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EAGPQGCA_	ENSG00000166963|ENST00000300231|MAP1A;MAP1A|p.S2460Ifs*4|1|0.32|ENSG00000166963|chr15:43528844-43528845|-/C|frameshift_variant;nc|ENSG00000166963|P78559-2|MAP1A	38.80614096846853	1.7418937515398478	2				NaN	NaN	0	NaN	11701	5243	16944
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16952	45.586	NaN	764.54	30	0	162.92	0.214			+	43659	TIVHELMY	8	39	503.25748419155104	1004.5004154499021	2	503.2579345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TIVHELMY_	REV__ENSG00000184445|ENST00000333479|KNTC1;REV__ENST00000436959.7_1_12:123087118-123101977:+|nuORF;REV__KNTC1|p.K1646Nfs*2|2|0.35|ENSG00000184445|chr12:122603073-122603073|A/-|frameshift_variant;REV__KNTC1|p.K1646Tfs*12|1|0.13|ENSG00000184445|chr12:122603073-122603074|AA/-|frameshift_variant;REV__KNTC1|p.L1647Tfs*12|1|0.3|ENSG00000184445|chr12:122603072-122603073|-/A|frameshift_variant	37.028477286268924	0.6747514403204248	2				NaN	NaN	0	NaN	11704	5246	16951
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16953	45.589	NaN	1011	30	0	152.11	0.035			+	30021	PPLTLSSPMS	10	45	515.2657547849611	1028.5169566367222	2	515.2655639648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PPLTLSSPMS_	REV__ENSG00000106410|ENST00000467773|NOBOX;REV__nc|ENSG00000106410|O60393-2|NOBOX	35.61828744233558	0.588957954432594	2				NaN	NaN	0	NaN	11705	5246	16951
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16960	45.619	NaN	1060.1	30	0	151.94	0.141			+	9130	EGLLLSHL	8	37	441.2581763159748	NaN	0	441.2580871582031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EGLLLSHL_	REV__ENST00000586118.5_1_18:47802317-47803521:-|nuORF	53.351449002276354	1.7418937515398478	2				NaN	NaN	0	NaN	11706	5252	16959
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16987	45.721	NaN	2168.1	30	0	355.43	0.142	+			42499	TANSITVTF	9	42	477.25035506983664	952.4861572064733	2	477.2505187988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TANSITVTF_	ENSG00000100307|ENST00000216133|CBX7;ENST00000490741.1_1_22:39529898-39530769:-|nuORF	93.19546047674547	0.05585629608842056	2				NaN	NaN	0	NaN	11715	5270	16986
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16996	45.753	NaN	971.73	30	0	124.1	0.214			+	-1	ICGMALGAL	9	39	453.2326474123568	904.4507418915136	2	453.2330017089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_IC(Carbamidomethyl (C))GMALGAL_	REV__ENSG00000174514|ENST00000367147|MFSD4A;REV__nc|ENSG00000174514|Q8N468-2|MFSD4A	60.403631409065575	0.21025000616765316	2				NaN	NaN	0	NaN	11718	5276	16995
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16997	45.757	NaN	764.42	30	0	389.33	0.106			+	2401	APACAAGL	8	25	337.1695511087048	NaN	0	337.16949462890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_APACAAGL_	REV__ENST00000370200.5_1_10:102822312-102822666:+|nuORF	16.704963439144045	1.7418937515398478	2				NaN	NaN	0	NaN	11719	5276	16995
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16998	45.759	NaN	590.45	30	0	157.9	0.03	+			24357	LFMLLAMF	8	23	329.1807984564651	NaN	0	329.18060302734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LFMLLAMF_	ENSG00000248109|ENST00000638089|MARCOL	24.504012794735996	1.7418937515398478	2				NaN	NaN	0	NaN	11720	5276	16995
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17007	45.791	NaN	804.03	30	0	124.87	0.139			+	-1	CVAAASGG	8	34	346.6553168382968	NaN	0	346.6555480957031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_C(Carbamidomethyl (C))VAAASGG_	REV__ENST00000527257.1_1_11:124971961-124972228:-|nuORF;REV__ENST00000528724.5_1_11:124971366-124972204:-|nuORF;REV__ENST00000529609.5_1_11:124967554-124972228:-|nuORF	21.70233525837049	1.7418937515398478	2				NaN	NaN	0	NaN	11723	5282	17006
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17013	45.809	NaN	439.32	30	0	44.158	0.139			+	2442	APGYGSAGHYG	11	29	346.15590281021315	NaN	0	346.1552429199219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_APGYGSAGHYG_	REV__ENSG00000115297|ENST00000233638|TLX2;REV__TLX2|p.A98Rfs*16|2|0.18|ENSG00000115297|chr2:74515092-74515092|G/-|frameshift_variant	20.030474535948922	0.456735970842152	2				NaN	NaN	0	NaN	11726	5285	17012
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17017	45.825	NaN	1013.5	30	0	70.175	0.14	+			8405	EAPKLRSSRPP	11	42	413.2381796146584	NaN	0	413.2385559082031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EAPKLRSSRPP_	ENST00000466855.1_1_7:150774601-150775027:-|nuORF;ENST00000467237.5_1_7:150774601-150776190:-|nuORF	22.561587123415745	0.456735970842152	2				NaN	NaN	0	NaN	11727	5288	17016
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17021	45.842	NaN	3097.4	30	0	736.62	0.143				-1	 	0	58	492.82570932899546	983.6368657247909	2	492.8269348144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11728	5291	17020
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17057	46.001	NaN	680.87	30	0	51.009	0.142			+	10757	FAFAFVVI	8	42	457.2639806671002	NaN	0	457.2638244628906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FAFAFVVI_	REV__tr|U7SFR3|U7SFR3_FUSNUDiacylglyceryltransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02327PE=4SV=1	24.504012794735996	1.7418937515398478	2				NaN	NaN	0	NaN	11734	5321	17056
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17071	46.053	NaN	1473	30	0	102.94	0.141	+			33311	RGRSPSPI	8	52	435.2512134500208	868.4878739668417	2	435.2515869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RGRSPSPI_	ENSG00000168502|ENST00000695636|MTCL1;MTCL1|p.L1858Wfs*5|1|0.26|ENSG00000168502|chr18:8826125-8826125|C/-|frameshift_variant;MTCL1|p.P1841Lfs*22|1|0.05|ENSG00000168502|chr18:8826071-8826071|C/-|frameshift_variant;nc|ENSG00000168502|Q9Y4B5-2|MTCL1;nc|ENSG00000168502|Q9Y4B5-3|MTCL1;nc|ENSG00000168502|Q9Y4B5-4|MTCL1;nc|ENSG00000168502|Q9Y4B5|MTCL1	25.450171626174864	0.7628259754767981	2				NaN	NaN	0	NaN	11739	5330	17070
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17078	46.085	NaN	1861.2	30	0	261.48	0.141	+			15859	GYGGGFGNF	9	46	438.1875595602739	NaN	0	438.1877746582031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GYGGGFGNF_	ENSG00000115271|ENST00000437150|GCA;ENST00000479199.1_1_2:163200728-163213435:+|nuORF;ENST00000481161.5_1_2:163200677-163213018:+|nuORF;ENST00000487445.6_1_2:163200677-163215720:+|nuORF	138.4795579985376	0.0005403778443010562	2				NaN	NaN	0	NaN	11740	5336	17077
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17113	46.258	NaN	1260	30	0	316.53	0.143	+			29594	PFQPHRPI	8	34	496.2766123511893	990.5386717691787	2	496.2765808105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PFQPHRPI_	HERVH-int_dup4765|chr13:43060715-43061388:-|2.073122916940509|0.3800345561863495|2.45|479.0|2|1|sense	50.0245360154114	0.5941082100236891	2				NaN	NaN	0	NaN	11742	5369	17112
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17122	46.292	NaN	3056.3	30	0	786.6	0.143	+			29291	NYISGIQTI	9	54	504.7718563181851	1007.5291597031702	2	504.7725524902344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NYISGIQTI_	ENSG00000189091|ENST00000302516|SF3B3;nc|ENSG00000189091|Q15393-3|SF3B3	80.45461616416974	0.09558281504443908	2				NaN	NaN	0	NaN	11745	5375	17121
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17144	46.389	NaN	1918.1	30	0	126.01	0.141			+	28603	NKPQIRGG	8	59	435.2512134500208	868.4878739668417	2	435.2515563964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NKPQIRGG_	REV__ENSG00000115020|ENST00000264380|PIKFYVE;REV__PIKFYVE|p.M1447Wfs*31|1|0.24|ENSG00000115020|chr2:208335870-208335870|A/-|frameshift_variant	26.79610172149135	0.7524337208463756	2				NaN	NaN	0	NaN	11749	5393	17143
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17149	46.406	NaN	1852.4	30	0	622.88	0.143			+	-1	KSPFGMKVL	9	46	511.78867276370516	1021.5627925942104	2	511.7890319824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_KSPFGM(Oxidation (M))KVL_	REV__ENSG00000124571|ENST00000265351|XPO5	34.172542307311794	0.4838870758800184	2				NaN	NaN	0	NaN	11751	5396	17148
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17163	46.47	NaN	2991.9	30	0	677.78	0.214			+	42582	TASSLFLHL	9	59	494.7765810686996	987.5386092041992	2	494.7770690917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TASSLFLHL_	REV__ENSG00000152463|ENST00000378228|OLAH;REV__nc|ENSG00000152463|Q9NV23-2|OLAH;REV__OLAH|p.K164Sfs*10|2|0.24|ENSG00000152463|chr10:15065666-15065666|C/-|frameshift_variant;REV__OLAH|p.N251Ifs*6|1|0.13|ENSG00000152463|chr10:15073182-15073183|-/TTGTATTC|frameshift_variant	97.47269410471826	0.04379738608259218	2				NaN	NaN	0	NaN	11753	5408	17162
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17164	46.473	NaN	1570.3	30	0	293.97	0.035	+			28114	NAIHAILLY	9	44	514.3004265241796	1026.586300115159	2	514.301025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NAIHAILLY_	ENSG00000110090|ENST00000265641|CPT1A;nc|ENSG00000110090|P50416-2|CPT1A	79.9392285194092	0.09781135437301468	2				NaN	NaN	0	NaN	11754	5408	17162
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17194	46.587	NaN	1837.9	30	0	303.75	0.142	+			7332	DAVHAILAY	9	51	486.76119167975475	971.5078304263095	2	486.7616271972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DAVHAILAY_	ENSG00000179021|ENST00000318887|C3orf38;nc|nan|Q5JPI3-2|C3orf38	71.37791200682192	0.13483053934309522	2				NaN	NaN	0	NaN	11763	5429	17193
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17218	46.698	NaN	1356.6	30	0	186.1	0.144	+			29140	NVADVVIKF	9	49	502.7924194526864	1003.5702859721728	2	502.7931823730469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NVADVVIKF_	ENSG00000118705|ENST00000237530|RPN2;nc|ENSG00000118705|P04844-2|RPN2	51.19269402634007	0.2889735674168909	2				NaN	NaN	0	NaN	11766	5450	17217
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17230	46.747	NaN	1389.5	30	0	94.02	0.141			+	47550	VRAHTKAS	8	58	435.2512134500208	868.4878739668417	2	435.25128173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VRAHTKAS_	REV__ENSG00000197136|ENST00000355703|PCNX3;REV__nc|ENSG00000197136|Q9H6A9-2|PCNX3	40.5726180659479	0.6527593143185008	2				NaN	NaN	0	NaN	11769	5459	17229
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17252	46.831	NaN	671.19	30	0	56.017	0.142				-1	LGGILMSAL	9	44	445.75457763671875	NaN	0	445.75457763671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LGGILM(Oxidation (M))SAL_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	60.29395666154354	0.1480651883005104	2				NaN	NaN	0	NaN	11776	5474	17251
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17356	47.228	NaN	955.98	30	0	164.55	0.139			+	43532	TGVCGPLA	8	36	359.18280251240543	NaN	0	359.1828308105469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TGVCGPLA_	REV__ENST00000433031.1_1_7:57216973-57217525:-|nuORF	37.028477286268924	1.7418937515398478	2				NaN	NaN	0	NaN	11811	5543	17355
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17361	47.245	NaN	1122.8	30	0	74.634	0.214	+			13882	GRARDAIL	8	54	457.26416506406235	912.5137771949247	2	457.26416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))GRARDAIL_	ENSG00000103490|ENST00000247470|PYCARD;nc|ENSG00000103490|Q9ULZ3-2|PYCARD;nc|ENSG00000103490|Q9ULZ3-3|PYCARD	40.5726180659479	0.6527593143185008	2				NaN	NaN	0	NaN	11813	5546	17360
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17362	47.248	NaN	616.16	30	0	63.025	0.031	+			45224	TVPAGVAS	8	33	351.1937561035156	NaN	0	351.1937561035156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVPAGVAS_	ENST00000332810.3_1_15:89169900-89172472:+|nuORF;ENST00000557927.1_1_15:89169900-89169984:+|nuORF	18.324413293986947	1.7418937515398478	2				NaN	NaN	0	NaN	11814	5546	17360
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17415	47.485	NaN	1060.9	30	0	247.41	0.142	+			9267	EHAAVKNDT	9	44	492.7429214643402	NaN	0	492.74261474609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EHAAVKNDT_	ENSG00000133958|ENST00000695012|UNC79;nc|ENSG00000133958|Q9P2D8-2|UNC79;nc|ENSG00000133958|Q9P2D8-3|UNC79;nc|ENSG00000133958|Q9P2D8|UNC79;UNC79|p.E1772Rfs*6|1|0.14|ENSG00000133958|chr14:93622543-93622543|G/-|frameshift_variant;UNC79|p.F2181Lfs*10|2|0.33|ENSG00000133958|chr14:93655372-93655372|T/-|frameshift_variant;UNC79|p.H1937Pfs*2|1|0.36|ENSG00000133958|chr14:93634607-93634608|-/C|frameshift_variant;UNC79|p.K1493Sfs*12|1|0.52|ENSG00000133958|chr14:93621704-93621704|A/-|frameshift_variant;UNC79|p.K1620Nfs*23|1|0.44|ENSG00000133958|chr14:93622089-93622089|A/-|frameshift_variant;UNC79|p.M1332Cfs*31|1|0.31|ENSG00000133958|chr14:93613031-93613031|A/-|frameshift_variant	49.536043120802724	0.20989033510253738	2				NaN	NaN	0	NaN	11822	5591	17414
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17436	47.58	NaN	1233.3	30	0	84.331	0.142			+	43643	TIRKTHGT	8	47	457.26416506406235	912.5137771949247	2	457.2650451660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TIRKTHGT_	REV__FAM91A1|p.A379T|3|0.25|ENSG00000176853|chr8:123787317-123787317|G/A|missense_variant	20.94693142431847	0.7975965917238792	2				NaN	NaN	0	NaN	11825	5609	17435
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17485	47.804	NaN	1998.2	30	0	763.89	0.143	+			7953	DSNLSVVKK	9	47	495.2836211300162	988.5526893268324	2	495.2842102050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DSNLSVVKK_	ENSG00000015568|ENST00000016946|RGPD5;ENSG00000153165|ENST00000409886|RGPD3;ENSG00000153201|ENST00000283195|RANBP2;ENSG00000169629|ENST00000302558|RGPD8;ENSG00000183054|ENST00000329516|RGPD6;ENSG00000185304|ENST00000398146|RGPD2;ENSG00000187627|ENST00000641458|RGPD1;ENSG00000196862|ENST00000408999|RGPD4;nc|ENSG00000183054|Q99666-2|RGPD5;nc|ENSG00000187627|P0DJD0|RGPD1;RANBP2|p.A864Lfs*3|1|0.3|ENSG00000153201|chr2:108758533-108758533|G/-|frameshift_variant;RANBP2|p.C2737Vfs*35|1|0.18|ENSG00000153201|chr2:108772957-108772957|T/-|frameshift_variant;RANBP2|p.F3068Lfs*10|1|0.06|ENSG00000153201|chr2:108782692-108782692|T/-|frameshift_variant;RANBP2|p.H3114Sfs*18|1|0.33|ENSG00000153201|chr2:108782827-108782828|-/T|frameshift_variant;RANBP2|p.K1989Nfs*9|1|0.05|ENSG00000153201|chr2:108766505-108766506|-/TATCCTG|frameshift_variant;RANBP2|p.K2576Nfs*63|2|0.22|ENSG00000153201|chr2:108768262-108768262|A/-|frameshift_variant;RANBP2|p.S1486Rfs*51|1|0.05|ENSG00000153201|chr2:108764996-108764997|-/ATTTTGTATTC|frameshift_variant;RGPD2|p.F1350Lfs*25|1|0.25|ENSG00000185304|chr2:87782974-87782974|A/-|frameshift_variant;RGPD3|p.V1441*|1|0.45|ENSG00000153165|chr2:106423647-106423647|T/-|frameshift_variant	27.882242232435846	0.5426732730940306	2				NaN	NaN	0	NaN	11832	5651	17484
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17527	47.995	NaN	3490.6	30	0	750.29	0.14	+			43828	TLSLALSL	8	44	409.2549297876091	816.4953066420182	2	409.25543212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TLSLALSL_	ENST00000505912.1_1_4:113332098-113335446:+|nuORF	68.484700416344	0.4195245774506064	2				NaN	NaN	0	NaN	11838	5687	17526
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17616	48.411	NaN	716.5	30	0	55.414	0.142			+	33626	RLTKHTTT	8	41	479.2774422479577	NaN	0	479.2787170410156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RLTKHTTT_	REV__ENSG00000176974|ENST00000316694|SHMT1;REV__ENSG00000182199|ENST00000328923|SHMT2;REV__ENST00000553837.5_1_12:57625333-57628141:+|nuORF;REV__ENST00000554467.5_1_12:57626145-57626750:+|nuORF;REV__ENST00000555774.5_1_12:57624752-57628141:+|nuORF;REV__ENST00000556825.5_1_12:57623475-57628141:+|nuORF;REV__ENST00000557348.5_1_12:57623887-57628141:+|nuORF;REV__ENST00000557433.5_1_12:57625333-57628141:+|nuORF;REV__nc|ENSG00000176974|P34896-2|SHMT1;REV__nc|ENSG00000176974|P34896-3|SHMT1;REV__nc|ENSG00000176974|P34896-4|SHMT1;REV__nc|ENSG00000182199|P34897-2|SHMT2;REV__nc|ENSG00000182199|P34897-3|SHMT2;REV__SHMT2|p.H328Tfs*8|1|0.54|ENSG00000182199|chr12:57233300-57233300|C/-|frameshift_variant	23.04248740728303	1.7418937515398478	2				NaN	NaN	0	NaN	11849	5765	17615
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17720	48.89	NaN	1083.7	30	0	302.64	0.146	+			37217	SKLHSLEYLD	10	32	402.21271645370194	NaN	0	402.2121276855469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SKLHSLEYLD_	ENSG00000132000|ENST00000588872|PODNL1;nc|ENSG00000132000|Q6PEZ8-2|PODNL1;nc|ENSG00000132000|Q6PEZ8-3|PODNL1;nc|ENSG00000132000|Q6PEZ8|PODNL1	31.634271133179894	0.39630454568332174	2				NaN	NaN	0	NaN	11863	5855	17719
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17726	48.908	NaN	1705.7	30	0	305.29	0.141	+			44475	TSQTLLLL	8	41	444.77343219025556	887.5323114473111	2	444.7738952636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSQTLLLL_	ENSG00000103047|ENST00000261778|TANGO6;ENST00000564180.1_1_16:68877520-68901131:+|nuORF	110.33723246496265	0.24497573416425186	2				NaN	NaN	0	NaN	11866	5858	17725
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17918	49.659	NaN	1712	30	0	1112.4	0.138				-1	 	0	33	340.259185470768	678.503818008336	2	340.2593994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11932	5984	17917
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17993	49.863	NaN	5387.8	30	0	4502.5	0.141				-1	GQLGNCHA	8	37	428.69035840620404	855.3661638792081	2	428.6911926269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GQLGNC(Carbamidomethyl (C))HA_	nc|ENSG00000145832|Q6ZT89-2|SLC25A48	14.664097394203935	0.7913966407026132	2				NaN	NaN	0	NaN	11983	6008	17992
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18004	49.89	NaN	5100.3	30	0	1765.4	0.214			+	-1	YSSSMVLFC	9	32	555.2369283356861	1108.4593037381721	2	555.23876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_YSSSM(Oxidation (M))VLFC(Carbamidomethyl (C))_	REV__ENSG00000175318|ENST00000309731|GRAMD2A;REV__ENST00000565233.5_1_15:72454352-72456104:-|nuORF;REV__ENST00000567662.5_1_15:72454352-72455956:-|nuORF	18.324413293986947	0.6112419832031293	2				NaN	NaN	0	NaN	11991	6011	18003
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18005	49.893	NaN	2334.1	30	0	783.11	0.037				-1	QMIMMMAFQ	9	27	589.7406414876606	1177.466730042121	2	589.742431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	3 Oxidation (M)	_QM(Oxidation (M))IM(Oxidation (M))M(Oxidation (M))MAFQ_	ENST00000400122.7_1_17:38788595-38792200:-|nuORF	16.473147378115264	0.6112419832031293	2				NaN	NaN	0	NaN	11992	6011	18003
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18082	50.108	NaN	652.55	30	0	116.83	0.142	+			47072	VLIENVASL	9	36	479.28404231707196	NaN	0	479.28466796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VLIENVASL_	ENSG00000176153|ENST00000389614|GPX2;GPX2|p.W152*|1|0.31|ENSG00000176153|chr14:64939605-64939605|C/-|frameshift_variant	47.95952297671804	0.22075498469600283	2				NaN	NaN	0	NaN	12042	6038	18081
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	1986	10.455	NaN	3565.4	30	0	414.19	0.214			+	-1	PHHCSYCQ	8	30	565.7088569965958	1129.4031610599916	2	565.7093505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term),2 Carbamidomethyl (C)	_(Acetyl (Protein N-term))PHHC(Carbamidomethyl (C))SYC(Carbamidomethyl (C))Q_	REV__CSMD3|p.S380Lfs*12|1|0.04|ENSG00000164796|chr8:112976042-112976043|-/AGAAAGA|frameshift_variant	13.775330524044264	0.789990904165365	2				NaN	NaN	0	NaN	0	1984	1985
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	1987	10.458	NaN	3544.5	30	0	1142.1	0.106	+			11613	FPTSSNTTSD	10	27	528.7275953800201	1055.4406378268402	2	528.727294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FPTSSNTTSD_	NDST4|p.P655S|1|0.49|ENSG00000138653|chr4:114845975-114845975|G/A|missense_variant	14.137123925751023	0.7446123510383054	2				NaN	NaN	0	NaN	1	1984	1985
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	1988	10.46	NaN	2620.3	30	0	1022.5	0.036				-1	YFDNCNYT	8	21	548.7066123242274	1095.3986717152547	2	548.7061767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_YFDNC(Carbamidomethyl (C))NYT_	sp|P16719|UL01_HCMVAGlycoproteinUL1OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL1PE=3SV=1	7.690282842768113	0.7803663624056911	2				NaN	NaN	0	NaN	2	1984	1985
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	1994	10.477	NaN	2157.6	30	0	640.4	0.214	+			22906	KVMKDAKTK	9	43	532.8106689453125	NaN	0	532.8106689453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_KVM(Oxidation (M))KDAKTK_	ENSG00000198900|ENST00000361337|TOP1	61.691277971877994	0.14210560126578747	2				NaN	NaN	0	NaN	5	1987	1993
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	1995	10.481	NaN	751.71	30	0	177.31	0.106	+			21831	KRGGAPCFPGV	11	20	544.7884521484375	NaN	0	544.7884521484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KRGGAPCFPGV_	ENST00000309117.10_1_21:38639566-38639725:-|nuORF	14.864876125193954	0.456735970842152	2				NaN	NaN	0	NaN	6	1987	1993
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	1996	10.483	NaN	277.53	30	0	76.218	0.035			+	-1	PIALCNNCK	9	13	516.7496337890625	NaN	0	516.7496337890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_PIALCNNC(Carbamidomethyl (C))K_	REV__ENSG00000092140|ENST00000206595|G2E3;REV__ENST00000549159.1_1_14:31081376-31085737:+|nuORF	7.193352174278301	0.40727630907727536	2				NaN	NaN	0	NaN	7	1987	1993
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2006	10.529	NaN	290.79	30	0	63.958	0.143	+			26380	LTDNSPDQGP	10	15	522.23388671875	NaN	0	522.23388671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LTDNSPDQGP_	ENSG00000120798|ENST00000333003|NR2C1;ENST00000552861.5_1_12:95452077-95461160:-|nuORF;nc|ENSG00000120798|P13056-2|NR2C1;nc|ENSG00000120798|P13056-3|NR2C1	13.45404412870281	0.4201028297492154	2				NaN	NaN	0	NaN	8	1996	2005
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2019	10.593	NaN	1566.2	30	0	823.14	0.143				-1	MSGFPRMR	8	19	499.2395935058594	NaN	0	499.2395935058594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_MSGFPRM(Oxidation (M))R_	ENST00000378078.4_1_9:35750983-35751301:+|nuORF	13.775330524044264	1.7418937515398478	2				NaN	NaN	0	NaN	9	2008	2018
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2032	10.656	NaN	2481.6	30	0	404.09	0.144				-1	STVKENMKK	9	47	540.7899933882712	1079.5654338433424	2	541.2913818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_STVKENM(Oxidation (M))KK_	ENST00000590996.5_2_17:41329998-41338351:+|nuORF	35.61828744233558	0.47037581924408073	2				NaN	NaN	0	NaN	10	2020	2031
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2036	10.673	NaN	23134	30	0	15711	0.214	+			4836	ATPKKASKPK	10	50	528.3325580654049	1054.6505631976097	2	528.3327026367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATPKKASKPK_	ENSG00000189060|ENST00000340857|H1-0;nc|ENSG00000189060|P07305-2|H1-0	82.83050618871818	0.17249597090446123	2				NaN	NaN	0	NaN	11	2023	2035
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2037	10.677	NaN	4803.9	30	0	1093.2	0.106			+	21610	KPMNQLAQHS	10	53	577.2930370931319	1152.5715212530638	2	577.2925415039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KPMNQLAQHS_	REV__ENSG00000168434|ENST00000307149|COG7	37.81151784470057	0.569310847604193	2				NaN	NaN	0	NaN	12	2023	2035
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2038	10.679	NaN	12322	30	0	7961	0.106	+			4837	ATPKKASKPK	10	36	352.55689936145114	1054.6488686845535	3	352.55694580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATPKKASKPK_	ENSG00000189060|ENST00000340857|H1-0;nc|ENSG00000189060|P07305-2|H1-0	18.531049691330335	0.7222854500618138	2				NaN	NaN	0	NaN	13	2023	2035
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2039	10.681	NaN	6689.1	30	0	3254.2	0.036				-1	RKSFCRLL	8	26	540.3119459047533	1078.6093388763065	2	540.3125610351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_RKSFC(Carbamidomethyl (C))RLL_	ENST00000422625.5_1_3:190231879-190272481:+|nuORF	7.193352174278301	0.7795803817164585	2				NaN	NaN	0	NaN	14	2023	2035
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2043	10.695	NaN	712.44	30	0	125.74	0.144			+	30098	PREWTTTKT	9	14	560.2908325195312	NaN	0	560.2908325195312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PREWTTTKT_	REV__ENSG00000198373|ENST00000359154|WWP2;REV__nc|ENSG00000198373|O00308-2|WWP2;REV__nc|ENSG00000198373|O00308-4|WWP2	12.206847966760668	0.39566704307768535	2				NaN	NaN	0	NaN	15	2026	2042
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2047	10.712	NaN	3847.9	30	0	1320	0.142				-1	GTMGVSKHK	9	44	480.74976521453016	NaN	0	480.7497253417969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_GTM(Oxidation (M))GVSKHK_	ENSG00000125676|ENST00000245838|THOC2;nc|ENSG00000125676|Q8NI27-2|THOC2	47.657333605630114	0.2228375344433429	2				NaN	NaN	0	NaN	16	2029	2046
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2054	10.835	NaN	7071.6	30	0	1261.9	0.145	+			22289	KTDPSAAGRKK	11	76	579.8335212032064	1157.6524894732127	2	579.8331909179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTDPSAAGRKK_	ENSG00000183495|ENST00000389561|EP400;EP400|p.P2793Rfs*46|1|0.3|ENSG00000183495|chr12:132064707-132064707|C/-|frameshift_variant;nc|ENSG00000183495|Q96L91-3|EP400;nc|ENSG00000183495|Q96L91-4|EP400;nc|ENSG00000183495|Q96L91-5|EP400;nc|ENSG00000183495|Q96L91|EP400	111.49648218090348	0.03691976822070063	2				NaN	NaN	0	NaN	17	2035	2053
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2059	10.852	NaN	1022.8	30	0	149.38	0.145				-1	ADNMYRNMII	10	21	628.793212890625	NaN	0	628.793212890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ADNM(Oxidation (M))YRNMII_	ENSG00000157483|ENST00000288235|MYO1E	20.94693142431847	0.4201028297492154	2				NaN	NaN	0	NaN	19	2038	2058
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2072	10.915	NaN	1367.5	30	0	282.22	0.146	+			22669	KTYTGHKNEK	10	43	603.3174303452987	NaN	0	603.3173217773438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTYTGHKNEK_	ENSG00000196363|ENST00000358625|WDR5;ENSG00000196981|ENST00000330689|WDR5B	45.764366957710365	0.3323807681183361	2				NaN	NaN	0	NaN	20	2050	2071
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2088	10.995	NaN	5015	30	0	1888.6	0.145	+			34483	RVDEQHRRK	9	45	612.3398158623443	1222.6650787914884	2	612.33935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVDEQHRRK_	ENSG00000134240|ENST00000369406|HMGCS2;nc|ENSG00000134240|P54868-2|HMGCS2;nc|ENSG00000134240|P54868-3|HMGCS2	54.776311868738084	0.25715957988447635	2				NaN	NaN	0	NaN	21	2065	2087
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2096	11.028	NaN	1969.1	30	0	541.64	0.142	+			4528	ATKSPAKPK	9	40	464.28464989517715	926.5547468571543	2	464.2844543457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATKSPAKPK_	ENSG00000184357|ENST00000331442|H1-5	65.46538089061403	0.16805504838372562	2				NaN	NaN	0	NaN	23	2071	2095
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2104	11.062	NaN	2797.3	30	0	847.7	0.214	+			19606	KDFMTYLSA	9	53	538.260779048361	1074.5070051635219	2	538.2608642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KDFMTYLSA_	ENSG00000153107|ENST00000341068|ANAPC1;ENST00000454465.1_1_2:87398353-87423749:+|nuORF	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	25	2077	2103
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2105	11.065	NaN	1492.9	30	0	368.38	0.035	+			38310	SRCFIRKS	8	16	498.774586068605	995.53461920401	2	498.7745666503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SRCFIRKS_	ENST00000517970.5_1_8:87393769-87393850:+|nuORF	11.511019455917149	0.786409509643324	2				NaN	NaN	0	NaN	26	2077	2103
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2109	11.08	NaN	6537.1	30	0	1937.4	0.214	+			21007	KKGTEEKKK	9	69	538.3274631656159	1074.6403733980317	2	538.32763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KKGTEEKKK_	ATRX|p.I1049*|1|0.07|ENSG00000085224|chrX:77682111-77682111|T/-|frameshift_variant;ATRX|p.I1049Nfs*4|1|0.15|ENSG00000085224|chrX:77682110-77682111|-/T|frameshift_variant;ATRX|p.N1318Ifs*28|1|0.39|ENSG00000085224|chrX:77663549-77663549|T/-|frameshift_variant;ATRX|p.Q1385Sfs*6|1|0.26|ENSG00000085224|chrX:77656621-77656622|-/A|frameshift_variant;ENSG00000085224|ENST00000373344|ATRX;nc|ENSG00000085224|P46100-2|ATRX;nc|ENSG00000085224|P46100-3|ATRX;nc|ENSG00000085224|P46100-4|ATRX;nc|ENSG00000085224|P46100-5|ATRX;nc|ENSG00000085224|P46100-6|ATRX	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	27	2080	2108
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2110	11.084	NaN	2525.4	30	0	537.65	0.106	+			29983	PPDICSRTVW	10	29	587.2875649003846	1172.5605768675691	2	587.2871704101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PPDICSRTVW_	ENSG00000168288|ENST00000303319|MMADHC;MMADHC|p.N77Tfs*2|1|0.25|ENSG00000168288|chr2:149579575-149579575|C/-|frameshift_variant	26.69291269510374	0.6618461711292317	2				NaN	NaN	0	NaN	28	2080	2108
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2111	11.086	NaN	906.44	30	0	223.34	0.036			+	30095	PRANSLYFC	9	19	535.75732421875	NaN	0	535.75732421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PRANSLYFC_	REV__ENSG00000015171|ENST00000381604|ZMYND11;REV__nc|ENSG00000015171|Q15326-2|ZMYND11;REV__nc|ENSG00000015171|Q15326-3|ZMYND11;REV__nc|ENSG00000015171|Q15326-4|ZMYND11;REV__nc|ENSG00000015171|Q15326-5|ZMYND11;REV__nc|ENSG00000015171|Q15326-6|ZMYND11;REV__ZMYND11|p.K345Rfs*43|1|0.18|ENSG00000015171|chr10:246845-246845|A/-|frameshift_variant;REV__ZMYND11|p.L498Afs*3|1|0.3|ENSG00000015171|chr10:248592-248602|GAGAAGCTCTG/-|frameshift_variant	10.865556482863946	0.40020666175442315	2				NaN	NaN	0	NaN	29	2080	2108
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2115	11.1	NaN	1847.7	30	0	646.62	0.214	+			15031	GTNKVASQK	9	43	466.76113607433695	NaN	0	466.76123046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTNKVASQK_	ENSG00000117519|ENST00000370206|CNN3;ENST00000401596.1_1_6:6535542-6535761:+|nuORF;nc|ENSG00000117519|Q15417-2|CNN3;nc|ENSG00000117519|Q15417-3|CNN3	76.16968421966216	0.08450868013726211	2				NaN	NaN	0	NaN	30	2083	2114
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2116	11.104	NaN	1576.7	30	0	379.07	0.106	+			25170	LLVVAMIGSF	10	28	525.3061853818508	1048.5978178305015	2	525.80712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LLVVAMIGSF_	OR4A5|p.G150S|1|0.21|ENSG00000221840|chr11:54707332-54707332|G/A|missense_variant	12.206847966760668	0.7544206824696849	2				NaN	NaN	0	NaN	31	2083	2114
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2117	11.106	NaN	1680	30	0	524.81	0.036			+	34756	RYDLYKQK	8	35	557.30484117676	1112.5951294203198	2	557.3023681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RYDLYKQK_	REV__ENSG00000179222|ENST00000326587|MAGED1;REV__MAGED1|p.P628Rfs*18|1|0.09|ENSG00000179222|chrX:51900215-51900215|C/-|frameshift_variant;REV__nc|ENSG00000179222|Q9Y5V3-2|MAGED1	32.81241826257853	0.7059802730411993	2				NaN	NaN	0	NaN	32	2083	2114
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2121	11.121	NaN	4773.9	30	0	1373.4	0.214	+			6022	AVMEKQKKK	9	56	545.3259827024591	1088.637412471718	2	545.3263549804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVMEKQKKK_	ENSG00000131037|ENST00000201647|EPS8L1;ENST00000587715.1_1_19:55598611-55598979:+|nuORF;ENST00000589362.5_1_19:55593317-55598979:+|nuORF;nc|ENSG00000131037|Q8TE68-2|EPS8L1;nc|ENSG00000131037|Q8TE68-3|EPS8L1;nc|ENSG00000131037|Q8TE68-4|EPS8L1	101.45984612302182	0.0377122763612125	2				NaN	NaN	0	NaN	33	2086	2120
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2122	11.124	NaN	2374.4	30	0	1077.8	0.106			+	33920	RRVDMGLF	8	19	497.2691126532642	992.5236723733284	2	497.2691345214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RRVDMGLF_	REV__ENST00000550106.5_1_12:95611896-95612004:+|nuORF	4.6817480819748125	0.7764044737779935	2				NaN	NaN	0	NaN	34	2086	2120
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2123	11.126	NaN	1768.8	30	0	428.93	0.106				-1	SHSGRYMLT	9	32	534.2506294924063	1066.4867060516126	2	534.2498779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_SHSGRYM(Oxidation (M))LT_	ENSG00000074211|ENST00000382599|PPP2R2C;nc|ENSG00000074211|Q9Y2T4-2|PPP2R2C;nc|ENSG00000074211|Q9Y2T4-3|PPP2R2C;nc|ENSG00000074211|Q9Y2T4-4|PPP2R2C	21.9598887501803	0.5980208138527809	2				NaN	NaN	0	NaN	35	2086	2120
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2124	11.128	NaN	4128.3	30	0	656.57	0.035	+			4512	ATKKPAPEK	9	52	323.86210349347465	968.564481080624	3	323.86212158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATKKPAPEK_	ENSG00000174444|ENST00000307961|RPL4;ENST00000422486.1_1_3:185135285-185135612:-|nuORF;ENST00000567229.5_1_15:66791747-66793486:-|nuORF	62.107414245175825	0.1960472003779324	2				NaN	NaN	0	NaN	36	2086	2120
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2132	11.159	NaN	8230.1	30	0	2034.7	0.214				-1	 	0	61	509.30613713593	508.29886066933	1	509.3063659667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	38	2092	2131
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2133	11.163	NaN	2695	30	0	1071.6	0.106			+	12027	FYDSVLAVK	9	25	521.285309897113	1040.556066861026	2	521.285400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FYDSVLAVK_	REV__ENST00000435830.6_1_3:37354991-37360805:+|nuORF	15.641811463095205	0.6112419832031292	2				NaN	NaN	0	NaN	39	2092	2131
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2134	11.165	NaN	1367.5	30	0	643.46	0.035	+			19821	KEDLQLWC	8	15	517.750732421875	NaN	0	517.750732421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEDLQLWC_	ENSG00000172954|ENST00000379509|LCLAT1;nc|ENSG00000172954|Q6UWP7|LCLAT1	12.206847966760668	1.7418937515398478	2				NaN	NaN	0	NaN	40	2092	2131
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2138	11.179	NaN	1639.5	30	0	391.07	0.214			+	29559	PEVNQNNSKS	10	23	558.7682495117188	NaN	0	558.7682495117188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PEVNQNNSKS_	REV__ARHGEF26|p.T596Nfs*3|1|0.29|ENSG00000114790|chr3:154194653-154194654|-/A|frameshift_variant;REV__ENSG00000114790|ENST00000465093|ARHGEF26;REV__nc|ENSG00000114790|Q96DR7-3|ARHGEF26;REV__nc|ENSG00000114790|Q96DR7-4|ARHGEF26	14.137123925751023	0.4201028297492154	2				NaN	NaN	0	NaN	41	2095	2137
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2139	11.183	NaN	1399.2	30	0	285.07	0.035	+			5488	AVADAQKRK	9	40	493.79022905739504	NaN	0	493.7901306152344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVADAQKRK_	ENSG00000161526|ENST00000584667|SAP30BP;ENST00000293208.13_1_17:73701692-73702598:+|nuORF;ENST00000578756.5_1_17:73699860-73702598:+|nuORF;ENST00000580322.5_1_17:73702024-73702598:+|nuORF;ENST00000580601.5_1_17:73689468-73702598:+|nuORF;ENST00000583329.5_1_17:73699767-73702598:+|nuORF;nc|ENSG00000161526|Q9UHR5-2|SAP30BP	47.95952297671804	0.22075498469600283	2				NaN	NaN	0	NaN	42	2095	2137
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2149	11.23	NaN	2476.8	30	0	852.02	0.144	+			15394	GTYEKAKQK	9	58	526.7903812197815	1051.5662095063628	2	526.7898559570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTYEKAKQK_	ENSG00000179562|ENST00000321407|GCC1;GCC1|p.T633Afs*8|1|0.05|ENSG00000179562|chr7:127582446-127582447|-/CA|frameshift_variant	90.60085204095205	0.06317133949006545	2				NaN	NaN	0	NaN	43	2104	2148
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2153	11.247	NaN	2274	30	0	567.89	0.144				-1	RLTCSPPRM	9	28	538.7708515215159	NaN	0	538.7706909179688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_RLTCSPPRM(Oxidation (M))_	ARHGAP31|p.A1199Rfs*106|1|0.34|ENSG00000031081|chr3:119415522-119415522|G/-|frameshift_variant	35.61828744233558	0.29773779453147337	2				NaN	NaN	0	NaN	44	2107	2152
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2160	11.28	NaN	2789.8	30	0	911.26	0.142				-1	GIHCIARK	8	29	477.76904997697335	953.5235470207467	2	477.768798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GIHC(Carbamidomethyl (C))IARK_	ENSG00000188687|ENST00000394019|SLC4A5;nc|ENSG00000188687|Q9BY07-2|SLC4A5;nc|ENSG00000188687|Q9BY07-4|SLC4A5;nc|ENSG00000188687|Q9BY07-7|SLC4A5;nc|ENSG00000188687|Q9BY07|SLC4A5	13.775330524044264	0.789990904165365	2				NaN	NaN	0	NaN	45	2113	2159
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2165	11.297	NaN	2813.4	30	0	636.85	0.214			+	17058	HQTELNRM	8	41	514.7506632726022	1027.4867736120043	2	514.7506103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HQTELNRM_	REV__CEBPB|p.K293N|1|0.3|ENSG00000172216|chr20:50191912-50191912|G/T|missense_variant;REV__ENSG00000172216|ENST00000303004|CEBPB;REV__nc|ENSG00000172216|P17676-2|CEBPB;REV__nc|ENSG00000172216|P17676-3|CEBPB	24.20275056022122	0.7724576178584145	2				NaN	NaN	0	NaN	47	2116	2164
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2166	11.301	NaN	1128.5	30	0	410.87	0.035			+	33400	RICREFNG	8	22	497.7482237393722	993.4818945455444	2	497.74853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RICREFNG_	REV__ENSG00000141965|ENST00000269856|FEM1A	10.865556482863946	0.7853885997566867	2				NaN	NaN	0	NaN	48	2116	2164
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2171	11.316	NaN	1315.3	30	0	252.8	0.141			+	21630	KPSAAGGRE	9	36	436.73281399267563	871.4510750521513	2	436.73223876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KPSAAGGRE_	REV__ENST00000444836.5_1_1:12071645-12071879:+|nuORF	34.172542307311794	0.4838870758800184	2				NaN	NaN	0	NaN	50	2119	2170
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2175	11.333	NaN	4073.3	30	0	940.11	0.214	+			41453	SVNNKVSKK	9	61	502.29812372646023	1002.5816945197205	2	502.2980041503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVNNKVSKK_	ENSG00000188938|ENST00000375412|FAM120AOS	122.93914200107957	0.019420478173996256	2				NaN	NaN	0	NaN	51	2122	2174
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2176	11.336	NaN	2163.8	30	0	593.26	0.106	+			9668	ELTPATPLW	9	38	514.2782389490936	1026.5419249649872	2	514.780029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ELTPATPLW_	ENSG00000137648|ENST00000437212|TMPRSS4;nc|ENSG00000137648|Q9NRS4-2|TMPRSS4;nc|ENSG00000137648|Q9NRS4-3|TMPRSS4;nc|ENSG00000137648|Q9NRS4-4|TMPRSS4	33.51558372728122	0.4900267029546261	2				NaN	NaN	0	NaN	52	2122	2174
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2177	11.338	NaN	1085.9	30	0	203.99	0.033			+	33323	RGSIDVVV	8	37	422.7483690127134	843.4821850922268	2	422.747802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RGSIDVVV_	REV__CEP44|p.G157V|1|0.48|ENSG00000164118|chr4:174304332-174304332|G/T|missense_variant	38.80614096846853	0.6637206697844082	2				NaN	NaN	0	NaN	53	2122	2174
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2181	11.353	NaN	4800.4	30	0	907.01	0.214	+			9203	EGRLFYRH	8	62	539.2832488938394	1076.5519448544787	2	539.283447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EGRLFYRH_	ENSG00000150893|ENST00000280481|FREM2;ENSG00000183090|ENST00000329798|FREM3;FREM2|p.F2459Lfs*27|1|0.21|ENSG00000150893|chr13:38859443-38859443|T/-|frameshift_variant;FREM2|p.V1156Gfs*14|1|0.4|ENSG00000150893|chr13:38690806-38690807|-/G|frameshift_variant;nc|ENSG00000150893|Q5SZK8-2|FREM2	50.0245360154114	0.5941082100236891	2				NaN	NaN	0	NaN	54	2125	2180
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2182	11.357	NaN	2935.8	30	0	254.95	0.036			+	29788	PIMFAGGGHSQ	11	45	551.260172055479	1100.5057911777578	2	551.2603759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PIMFAGGGHSQ_	REV__ENSG00000174358|ENST00000304460|SLC6A19	34.172542307311794	0.6313490974540716	2				NaN	NaN	0	NaN	55	2125	2180
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2191	11.389	NaN	5107.8	30	0	697.41	0.213	+			40089	STNSNLSKHKK	11	81	622.341252965054	1242.6679529969078	2	622.34130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STNSNLSKHKK_	ENSG00000141956|ENST00000398548|PRDM15;nc|ENSG00000141956|P57071-2|PRDM15;nc|ENSG00000141956|P57071-3|PRDM15;nc|ENSG00000141956|P57071|PRDM15	77.38681394758683	0.17415818679910983	2				NaN	NaN	0	NaN	58	2131	2190
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2192	11.392	NaN	2178.7	30	0	304.98	0.039			+	-1	YNAFCLSHKK	10	36	634.3196672933769	NaN	0	634.319580078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_YNAFC(Carbamidomethyl (C))LSHKK_	REV__ENSG00000112246|ENST00000369208|SIM1	19.996771675451527	0.4201028297492154	2				NaN	NaN	0	NaN	59	2131	2190
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2199	11.423	NaN	20762	30	0	6646.4	0.214	+			22895	KVMKDAKTK	9	74	524.8128577766734	1047.6111626201466	2	524.8129272460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVMKDAKTK_	ENSG00000198900|ENST00000361337|TOP1	182.3913890336628	0.0010559746847940753	2				NaN	NaN	0	NaN	60	2137	2198
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2200	11.426	NaN	7016.8	30	0	3954.3	0.106	+			22532	KTQPVRNTE	9	35	536.7917927990475	1071.5690326648948	2	536.7921142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTQPVRNTE_	ENSG00000254087|ENST00000519728|LYN;LYN|p.E110Kfs*15|2|0.14|ENSG00000254087|chr8:55950495-55950495|A/-|frameshift_variant	23.52269567125451	0.5834155526130771	2				NaN	NaN	0	NaN	61	2137	2198
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2201	11.428	NaN	4590	30	0	1031.6	0.106	+			26168	LSRAYDGTTY	10	36	573.7736718029106	1145.532790672621	2	573.7739868164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSRAYDGTTY_	ENSG00000168883|ENST00000323701|USP39;ENST00000459775.5_1_2:85848673-85875928:+|nuORF;ENST00000493829.5_1_2:85843459-85872221:+|nuORF;nc|ENSG00000168883|Q53GS9-2|USP39;nc|ENSG00000168883|Q53GS9-3|USP39	34.172542307311794	0.6007644933930345	2				NaN	NaN	0	NaN	62	2137	2198
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2202	11.43	NaN	2523.1	30	0	300.46	0.039				-1	GQAFSKILHCL	11	54	637.3404323718337	1272.6663118104673	2	637.3412475585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_GQAFSKILHC(Carbamidomethyl (C))L_	ENSG00000129696|ENST00000431156|TTI2	29.170058357718403	0.683821074385409	2				NaN	NaN	0	NaN	63	2137	2198
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2208	11.446	NaN	1755.6	30	0	429.56	0.214			+	7539	DGVAGRQVRE	10	27	543.7869687673607	NaN	0	543.7870483398438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DGVAGRQVRE_	REV__HDGF|p.G51Rfs*63|1|0.37|ENSG00000143321|chr1:156745311-156745312|-/A|frameshift_variant	14.086013023434994	0.4201028297492154	2				NaN	NaN	0	NaN	66	2140	2207
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2209	11.45	NaN	2516.4	30	0	691.13	0.106				-1	WFLCPQVSGS	10	25	590.775146484375	NaN	0	590.775146484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_WFLC(Carbamidomethyl (C))PQVSGS_	ENST00000263097.8_1_19:1037929-1038361:+|nuORF	21.9598887501803	0.4201028297492154	2				NaN	NaN	0	NaN	67	2140	2207
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2210	11.452	NaN	2412.9	30	0	702.45	0.106	+			29529	PEEEPSTTLV	10	38	551.26904296875	NaN	0	551.26904296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PEEEPSTTLV_	ENSG00000016402|ENST00000316649|IL20RA;nc|ENSG00000016402|Q9UHF4-2|IL20RA;nc|ENSG00000016402|Q9UHF4-3|IL20RA	15.641811463095205	0.4201028297492154	2				NaN	NaN	0	NaN	68	2140	2207
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2211	11.454	NaN	2349.1	30	0	739.77	0.106				-1	LCFHYRHR	8	18	594.7973022460938	NaN	0	594.7973022460938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_LC(Carbamidomethyl (C))FHYRHR_	ENSG00000198746|ENST00000361720|GPATCH3	9.47055586587303	1.741893751539848	2				NaN	NaN	0	NaN	69	2140	2207
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2212	11.456	NaN	1682.7	30	0	537.89	0.106				-1	MLRNKICR	8	20	566.8087768554688	NaN	0	566.8087768554688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))MLRNKIC(Carbamidomethyl (C))R_	ENST00000512866.5_1_6:83898375-83898435:-|nuORF	18.324413293986947	1.7418937515398478	2				NaN	NaN	0	NaN	70	2140	2207
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2213	11.457	NaN	1583	30	0	389.97	0.106			+	19415	KAPLAAARAG	10	34	463.28257649958755	924.5506000659751	2	463.2830505371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KAPLAAARAG_	REV__ENSG00000182118|ENST00000366654|FAM89A	44.116797842482775	0.5112108506279902	2				NaN	NaN	0	NaN	71	2140	2207
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2214	11.459	NaN	1349.2	30	0	283.68	0.038				-1	CLYWDVMLE	9	21	614.772216796875	NaN	0	614.772216796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_C(Carbamidomethyl (C))LYWDVMLE_	ZNF175|p.R53W|1|0.37|ENSG00000105497|chr19:51581475-51581475|C/T|missense_variant	12.959181472943097	0.3931207604263714	2				NaN	NaN	0	NaN	72	2140	2207
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2218	11.474	NaN	11696	30	0	4758.2	0.214	+			4603	ATLKGHTKK	9	61	492.30345260974275	982.5923522862855	2	492.3030090332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATLKGHTKK_	ENSG00000110107|ENST00000227524|PRPF19;PRPF19|p.S440Hfs*2|1|0.3|ENSG00000110107|chr11:60897945-60897945|A/-|frameshift_variant	109.43880257439609	0.029570636687953285	2				NaN	NaN	0	NaN	73	2143	2217
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2219	11.477	NaN	10152	30	0	4338.9	0.106	+			1533	AGAVLRPTAK	10	47	328.5378017646384	982.5915758941153	3	328.5378723144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AGAVLRPTAK_	ENST00000452859.6_1_17:46184937-46190729:+|nuORF	31.529811441608018	0.6223461015008678	2				NaN	NaN	0	NaN	74	2143	2217
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2220	11.479	NaN	5062.8	30	0	1346.4	0.106			+	-1	EAEKKKKM	8	22	504.2830691470878	1006.5515853609757	2	504.2826843261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_EAEKKKKM(Oxidation (M))_	REV__ENSG00000152582|ENST00000356031|SPEF2;REV__nc|ENSG00000152582|Q9C093-2|SPEF2;REV__nc|ENSG00000152582|Q9C093-3|SPEF2;REV__SPEF2|p.I1348Nfs*12|1|0.34|ENSG00000152582|chr5:35773981-35773982|-/A|frameshift_variant;REV__SPEF2|p.N1040Tfs*10|1|0.32|ENSG00000152582|chr5:35739972-35739972|A/-|frameshift_variant;REV__SPEF2|p.T1227Qfs*5|1|0.23|ENSG00000152582|chr5:35763576-35763576|A/-|frameshift_variant	19.359975847455235	0.7988239741663654	2				NaN	NaN	0	NaN	75	2143	2217
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2221	11.481	NaN	4010.6	30	0	593.15	0.036	+			15866	GYIELTEWA	9	49	541.2642628007499	1080.5139726682996	2	541.264404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GYIELTEWA_	ANKUB1|p.K437Nfs*36|1|0.12|ENSG00000206199|chr3:149767351-149767352|-/G|frameshift_variant;ANKUB1|p.Q448Pfs*25|1|0.41|ENSG00000206199|chr3:149767319-149767320|-/G|frameshift_variant;ENSG00000206199|ENST00000446160|ANKUB1;nc|ENSG00000206199|A6NFN9-1|ANKUB1;nc|ENSG00000206199|A6NFN9|ANKUB1	18.324413293986947	0.6112419832031293	2				NaN	NaN	0	NaN	76	2143	2217
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2227	11.497	NaN	8517.5	30	0	3336.3	0.214				-1	 	0	23	477.2716163078985	952.528679682597	2	477.2713623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	79	2146	2226
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2228	11.501	NaN	7005.1	30	0	990.78	0.106	+			37845	SNLHALMNQ	9	48	514.2530958867393	1026.4916388402785	2	514.2530517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SNLHALMNQ_	ARHGAP11A|p.L629Ifs*3|1|0.21|ENSG00000198826|chr15:32636653-32636654|-/A|frameshift_variant;ARHGAP11A|p.T646Lfs*6|1|0.08|ENSG00000198826|chr15:32636708-32636709|-/CTTTC|frameshift_variant;ENSG00000198826|ENST00000361627|ARHGAP11A;nc|ENSG00000198826|Q6P4F7-3|ARHGAP11A	35.61828744233558	0.47037581924408073	2				NaN	NaN	0	NaN	80	2146	2226
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2229	11.503	NaN	3910.5	30	0	689.75	0.106	+			6809	CGPVLTWME	9	17	518.2348967521743	1034.4552405711486	2	518.2346801757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_CGPVLTWME_	ARHGAP33|p.P717Lfs*79|1|0.23|ENSG00000004777|chr19:35787194-35787194|C/-|frameshift_variant;ARHGAP33|p.P897Hfs*115|1|0.39|ENSG00000004777|chr19:35787733-35787733|C/-|frameshift_variant;ENSG00000004777|ENST00000007510|ARHGAP33;nc|ENSG00000004777|O14559-10|ARHGAP33;nc|ENSG00000004777|O14559-11|ARHGAP33;nc|ENSG00000004777|O14559-12|ARHGAP33	12.206847966760668	0.6112419832031292	2				NaN	NaN	0	NaN	81	2146	2226
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2230	11.505	NaN	2096.4	30	0	696.39	0.106				-1	AAHRPGLCP	9	13	489.7505209996667	977.4864890661335	2	489.75091552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_AAHRPGLC(Carbamidomethyl (C))P_	ENST00000267085.8_2_12:53553686-53554577:-|nuORF	8.231297230196988	0.6112419832031293	2				NaN	NaN	0	NaN	82	2146	2226
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2231	11.506	NaN	1026.2	30	0	280.45	0.106	+			13663	GNKTTIRMT	9	27	511.27716064453125	NaN	0	511.27716064453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GNKTTIRMT_	ENSG00000115525|ENST00000638572|ST3GAL5;nc|ENSG00000115525|Q9UNP4-2|ST3GAL5;nc|ENSG00000115525|Q9UNP4-3|ST3GAL5	20.83715455343099	0.3664576568725329	2				NaN	NaN	0	NaN	83	2146	2226
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2232	11.508	NaN	3486.5	30	0	707.75	0.106	+			22896	KVMKDAKTK	9	44	524.8128577766734	1047.6111626201466	2	524.7645263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KVMKDAKTK_	ENSG00000198900|ENST00000361337|TOP1	65.46538089061403	0.16805504838372562	2				NaN	NaN	0	NaN	84	2146	2226
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2233	11.51	NaN	2129.4	30	0	397.18	0.036				-1	PPCGDPGFSR	10	19	545.2443089192424	NaN	0	545.2457275390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_PPC(Carbamidomethyl (C))GDPGFSR_	ENST00000466883.5_1_7:65440836-65441142:-|nuORF	14.137123925751023	0.4201028297492154	2				NaN	NaN	0	NaN	85	2146	2226
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2237	11.524	NaN	5566.8	30	0	3276.3	0.214	+			48038	VSRTKTQPG	9	15	487.2747442657699	972.5349355983399	2	487.27435302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSRTKTQPG_	nc|ENSG00000229214|Q5T6M2|LINC00242	10.265252068803164	0.6112419832031293	2				NaN	NaN	0	NaN	86	2149	2236
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2238	11.528	NaN	5056.8	30	0	1379.9	0.106			+	-1	VATCSTLRS	9	22	497.75380386318915	NaN	0	497.7540588378906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_VATC(Carbamidomethyl (C))STLRS_	REV__ENST00000259711.10_1_6:17764181-17764271:-|nuORF	15.641811463095205	0.38404136392510424	2				NaN	NaN	0	NaN	87	2149	2236
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2239	11.53	NaN	1900.6	30	0	246.15	0.106	+			21442	KNDFAFLL	8	25	484.26568195149576	966.5168109697915	2	484.265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KNDFAFLL_	ENSG00000171492|ENST00000337338|LRRC8D	9.47055586587303	0.7831821681235687	2				NaN	NaN	0	NaN	88	2149	2236
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2240	11.531	NaN	3146.8	30	0	612.67	0.106			+	-1	VMKHKFTY	8	15	535.2772167888338	1068.5398806444675	2	535.277099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_VM(Oxidation (M))KHKFTY_	REV__ENSG00000185010|ENST00000360256|F8;REV__F8|p.E1101Rfs*17|1|0.25|ENSG00000185010|chrX:154930489-154930490|-/T|frameshift_variant;REV__F8|p.E1292Rfs*16|2|0.53|ENSG00000185010|chrX:154929920-154929920|T/-|frameshift_variant;REV__F8|p.E1988Rfs*4|1|0.36|ENSG00000185010|chrX:154903942-154903943|-/T|frameshift_variant;REV__F8|p.G1291Rfs*29|1|0.48|ENSG00000185010|chrX:154929919-154929920|-/T|frameshift_variant;REV__F8|p.N982Mfs*22|1|0.31|ENSG00000185010|chrX:154930845-154930845|T/-|frameshift_variant	8.231297230196988	0.7812220690224883	2				NaN	NaN	0	NaN	89	2149	2236
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2241	11.533	NaN	3892.1	30	0	515.2	0.106	+			36609	SGEVENNSDN	10	26	532.7119341012175	NaN	0	532.7122802734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SGEVENNSDN_	ENSG00000240505|ENST00000261652|TNFRSF13B;ENST00000581616.2_1_17:16844708-16875389:-|nuORF;ENST00000582931.5_1_17:16836228-16875389:-|nuORF;nc|ENSG00000240505|O14836-2|TNFRSF13B;nc|ENSG00000240505|O14836-3|TNFRSF13B;TNFRSF13B|p.D191Ifs*30|1|0.38|ENSG00000240505|chr17:16940386-16940386|C/-|frameshift_variant	14.137123925751023	0.4201028297492154	2				NaN	NaN	0	NaN	90	2149	2236
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2242	11.535	NaN	2856.1	30	0	474.53	0.106			+	-1	SDQMNPNAGAQ	11	26	574.7344360351562	NaN	0	574.7344360351562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_SDQM(Oxidation (M))NPNAGAQ_	REV__ANKFY1|p.P691Rfs*61|1|0.4|ENSG00000185722|chr17:4182230-4182230|G/-|frameshift_variant;REV__ENSG00000185722|ENST00000341657|ANKFY1;REV__ENST00000570934.5_1_17:4098183-4145738:-|nuORF;REV__nc|ENSG00000185722|Q9P2R3-2|ANKFY1;REV__nc|ENSG00000185722|Q9P2R3-4|ANKFY1	29.170058357718403	0.43541742044178583	2				NaN	NaN	0	NaN	91	2149	2236
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2243	11.537	NaN	2625.6	30	0	495.46	0.036	+			37439	SLHSLLWEA	9	23	528.2805531596996	1054.546553386199	2	528.2803344726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SLHSLLWEA_	DAB2IP|p.F712Lfs*81|1|0.42|ENSG00000136848|chr9:121772659-121772659|T/-|frameshift_variant;DAB2IP|p.N938Tfs*3|1|0.56|ENSG00000136848|chr9:121773334-121773334|C/-|frameshift_variant;ENSG00000136848|ENST00000408936|DAB2IP;nc|ENSG00000136848|Q5VWQ8-2|DAB2IP;nc|ENSG00000136848|Q5VWQ8-3|DAB2IP;nc|ENSG00000136848|Q5VWQ8-4|DAB2IP;nc|ENSG00000136848|Q5VWQ8-5|DAB2IP	18.262085536374414	0.6112419832031293	2				NaN	NaN	0	NaN	92	2149	2236
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2249	11.553	NaN	10038	30	0	6192.7	0.214	+			30642	QATAILKKK	9	37	500.8292741317659	999.6439953303318	2	500.8293151855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QATAILKKK_	ENST00000597828.5_1_3:181417563-181457401:+|nuORF;ENST00000600801.5_1_3:181417563-181457401:+|nuORF	58.22992032128504	0.22837015374068087	2				NaN	NaN	0	NaN	95	2152	2248
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2250	11.557	NaN	9103.2	30	0	1059.7	0.106	+			36747	SHELLCIQR	9	65	549.7897504861946	1097.5649480391892	2	549.7902221679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SHELLCIQR_	ENST00000446553.2_1_12:6959577-6960430:-|nuORF;ENST00000545368.5_1_12:6958360-6960430:-|nuORF	29.14955571784316	0.5308295550522326	2				NaN	NaN	0	NaN	96	2152	2248
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2251	11.559	NaN	3736.9	30	0	1728.8	0.106				-1	LQHRPMGQ	8	27	491.748780754134	981.483008575068	2	491.74847412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_LQHRPM(Oxidation (M))GQ_	ENSG00000081026|ENST00000307546|MAGI3;MAGI3|p.I1358Nfs*6|1|0.3|ENSG00000081026|chr1:113683633-113683634|-/A|frameshift_variant;MAGI3|p.K1170Rfs*5|1|0.26|ENSG00000081026|chr1:113683074-113683074|A/-|frameshift_variant;MAGI3|p.N1245Ifs*65|1|0.3|ENSG00000081026|chr1:113683297-113683297|A/-|frameshift_variant;MAGI3|p.R1443Hfs*9|1|0.06|ENSG00000081026|chr1:113683894-113683895|-/CATTTTCTCCTATTTTATCGTTACT|frameshift_variant;MAGI3|p.V1452Ffs*4|1|0.05|ENSG00000081026|chr1:113683921-113683922|-/TTTTATC|frameshift_variant;MAGI3|p.V1452Sfs*2|1|0.05|ENSG00000081026|chr1:113683920-113683921|-/T|frameshift_variant;nc|ENSG00000081026|Q5TCQ9-1|MAGI3;nc|ENSG00000081026|Q5TCQ9-2|MAGI3;nc|ENSG00000081026|Q5TCQ9-3|MAGI3	25.450171626174864	0.7628259754767981	2				NaN	NaN	0	NaN	97	2152	2248
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2252	11.56	NaN	6082.1	30	0	1483.1	0.106			+	-1	PWMTKEWI	8	23	553.771621704083	1105.528690474966	2	553.7719116210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_PWM(Oxidation (M))TKEWI_	REV__ENST00000306562.7_1_1:249142917-249143094:+|nuORF	9.47055586587303	0.7831821681235687	2				NaN	NaN	0	NaN	98	2152	2248
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2253	11.562	NaN	6174.3	30	0	1752	0.106	+			10514	EVVVESMEQ	9	36	525.2435683895034	1048.4725838458066	2	525.2435913085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EVVVESMEQ_	ENSG00000150527|ENST00000640607|MIA2;nc|ENSG00000150527|Q96PC5-2|MIA2	26.69291269510374	0.5537881896960711	2				NaN	NaN	0	NaN	99	2152	2248
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2254	11.564	NaN	7309	30	0	2856.9	0.106	+			10017	ERRVLLTAS	9	31	522.8113717474458	1043.6081905616916	2	522.8120727539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ERRVLLTAS_	DENND1C|p.G479Afs*3|2|0.28|ENSG00000205744|chr19:6468925-6468925|C/-|frameshift_variant;DENND1C|p.S553Lfs*8|1|0.17|ENSG00000205744|chr19:6468369-6468369|C/-|frameshift_variant;ENSG00000205744|ENST00000381480|DENND1C;ENST00000592543.5_1_19:6476783-6477092:-|nuORF;nc|ENSG00000205744|Q8IV53-2|DENND1C	15.641811463095205	0.6112419832031292	2				NaN	NaN	0	NaN	100	2152	2248
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2255	11.566	NaN	2881.4	30	0	673.74	0.036			+	-1	MDEYMKCV	8	17	546.2125935479885	1090.410634162777	2	546.2122802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))DEYMKC(Carbamidomethyl (C))V_	REV__ENST00000523006.1_1_7:139218986-139219103:+|nuORF	4.6817480819748125	0.7764044737779935	2				NaN	NaN	0	NaN	101	2152	2248
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2261	11.581	NaN	43004	30	0	33625	0.215				-1	 	0	43	512.8085394189878	1023.6025259047757	2	512.8084716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	104	2155	2260
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2262	11.584	NaN	7959	30	0	6174.3	0.106				-1	KYILMIQE	8	27	527.2859511697327	1052.5573494062653	2	527.2857666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_KYILM(Oxidation (M))IQE_	SNTG1|p.D34Y|1|0.34|ENSG00000147481|chr8:50402282-50402282|G/T|missense_variant	12.959181472943097	0.7887000251064199	2				NaN	NaN	0	NaN	105	2155	2260
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2263	11.586	NaN	9417.2	30	0	6020.4	0.106			+	33108	REMATIQING	10	34	566.7924317532922	1131.5703105733844	2	566.7925415039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_REMATIQING_	REV__ZNF7|p.K231Sfs*59|1|0.42|ENSG00000147789|chr8:144841793-144841793|A/-|frameshift_variant	12.811709888998246	0.7513471912541434	2				NaN	NaN	0	NaN	106	2155	2260
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2264	11.588	NaN	6552.7	30	0	3427.2	0.106			+	11947	FVIPALLEH	9	23	519.8030725329609	1037.5915921327216	2	519.8026733398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FVIPALLEH_	REV__ENSG00000131374|ENST00000696125|TBC1D5;REV__nc|ENSG00000131374|Q92609|TBC1D5;REV__TBC1D5|p.F566Lfs*23|1|0.22|ENSG00000131374|chr3:17214261-17214261|A/-|frameshift_variant	13.775330524044264	0.6112419832031292	2				NaN	NaN	0	NaN	107	2155	2260
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2265	11.59	NaN	7472.4	30	0	1346.9	0.106	+			29350	NYVMASFYK	9	35	561.7688352933848	1121.5231176535694	2	561.7698974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NYVMASFYK_	nc|ENSG00000157168|Q02297-11|NRG1;nc|ENSG00000157168|Q02297-12|NRG1;nc|ENSG00000157168|Q02297-6|NRG1;nc|ENSG00000157168|Q02297-7|NRG1	27.882242232435846	0.5426732730940306	2				NaN	NaN	0	NaN	108	2155	2260
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2266	11.592	NaN	9068.4	30	0	2469.8	0.106				-1	YTVMPPVFNP	10	20	590.7898286323912	1179.5651043315822	2	590.7893676757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_YTVM(Oxidation (M))PPVFNP_	ENSG00000241128|ENST00000366485|OR14A2	9.705651100619752	0.7671300402814404	2				NaN	NaN	0	NaN	109	2155	2260
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2267	11.594	NaN	5539.3	30	0	1957.7	0.037			+	7280	DAPGPREREQ	10	22	577.7810820006981	1153.5476110681961	2	577.78173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DAPGPREREQ_	REV__MORN1|p.E226Gfs*45|1|0.04|ENSG00000116151|chr1:2372548-2372549|TT/-|frameshift_variant	15.641811463095205	0.7369665665077569	2				NaN	NaN	0	NaN	110	2155	2260
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2271	11.608	NaN	3649.2	30	0	1698.9	0.214	+			28813	NPKIFFSP	8	19	475.26130176908185	948.5080506049637	2	475.2612609863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NPKIFFSP_	ENST00000599829.1_1_19:59068052-59068363:-|nuORF	13.775330524044264	0.789990904165365	2				NaN	NaN	0	NaN	111	2158	2270
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2272	11.611	NaN	4235.7	30	0	796.82	0.106			+	-1	RMDGYGVTTM	10	28	581.748808740417	1161.4830645476338	2	581.7474975585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Oxidation (M)	_RM(Oxidation (M))DGYGVTTM(Oxidation (M))_	REV__ENSG00000130037|ENST00000252321|KCNA5;REV__KCNA5|p.T569Pfs*15|1|0.32|ENSG00000130037|chr12:5045846-5045846|G/-|frameshift_variant;REV__nc|ENSG00000130037|P22460-2|KCNA5	9.705651100619752	0.7671300402814404	2				NaN	NaN	0	NaN	112	2158	2270
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2273	11.613	NaN	2590.4	30	0	412.96	0.106	+			20553	KFQIVDDTI	9	26	539.7906419584119	NaN	0	539.790771484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KFQIVDDTI_	ADGRV1|p.A1698Nfs*28|1|0.13|ENSG00000164199|chr5:90674214-90674215|-/GAACATATATATTC|frameshift_variant;ADGRV1|p.F5465Lfs*13|1|0.26|ENSG00000164199|chr5:90828964-90828964|T/-|frameshift_variant;ADGRV1|p.G3807Dfs*10|1|0.16|ENSG00000164199|chr5:90755021-90755021|A/-|frameshift_variant;ADGRV1|p.L4664Cfs*23|1|0.28|ENSG00000164199|chr5:90789790-90789790|A/-|frameshift_variant;ADGRV1|p.N3627Ifs*14|1|0.34|ENSG00000164199|chr5:90745697-90745697|A/-|frameshift_variant;ADGRV1|p.S1982Ffs*2|1|0.3|ENSG00000164199|chr5:90683859-90683860|-/T|frameshift_variant;ADGRV1|p.S2670Rfs*9|1|0.05|ENSG00000164199|chr5:90697000-90697001|-/GCCCAAAATAATT|frameshift_variant;ADGRV1|p.T5738Pfs*48|1|0.19|ENSG00000164199|chr5:90853288-90853288|A/-|frameshift_variant;ADGRV1|p.Y1610Tfs*36|1|0.42|ENSG00000164199|chr5:90672616-90672616|T/-|frameshift_variant;ADGRV1|p.Y5091Tfs*7|2|0.25|ENSG00000164199|chr5:90810525-90810525|T/-|frameshift_variant;ENSG00000164199|ENST00000405460|ADGRV1;nc|ENSG00000164199|Q8WXG9-3|ADGRV1;nc|ENSG00000164199|Q8WXG9-4|ADGRV1	23.04248740728303	0.3589936788096251	2				NaN	NaN	0	NaN	113	2158	2270
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2274	11.615	NaN	2290.4	30	0	291.09	0.106	+			21116	KKRKRCIW	8	29	559.3446044921875	NaN	0	559.3446044921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KKRKRCIW_	ENSG00000135899|ENST00000258381|SP110;ENST00000486146.2_1_2:231068050-231077551:-|nuORF;ENST00000490880.5_1_2:231065532-231076254:-|nuORF;nc|ENSG00000135899|Q9HB58-2|SP110;nc|ENSG00000135899|Q9HB58-3|SP110;nc|ENSG00000135899|Q9HB58-4|SP110;nc|ENSG00000135899|Q9HB58-5|SP110;nc|ENSG00000135899|Q9HB58-7|SP110;nc|ENSG00000135899|Q9HB58|SP110	12.206847966760668	1.7418937515398478	2				NaN	NaN	0	NaN	114	2158	2270
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2275	11.617	NaN	2999.5	30	0	611.73	0.106				-1	MPQFGGRAHC	10	18	609.7628784179688	NaN	0	609.7628784179688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term),Carbamidomethyl (C),Oxidation (M)	_(Acetyl (Protein N-term))M(Oxidation (M))PQFGGRAHC(Carbamidomethyl (C))_	ENST00000338148.7_1_2:99797589-99797634:+|nuORF	10.865556482863946	0.4201028297492154	2				NaN	NaN	0	NaN	115	2158	2270
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2276	11.619	NaN	2799.3	30	0	639.4	0.106				-1	YFMYGCLITP	10	19	612.277099609375	NaN	0	612.277099609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_YFM(Oxidation (M))YGCLITP_	ENSG00000189056|ENST00000428762|RELN;nc|ENSG00000189056|P78509-2|RELN;nc|ENSG00000189056|P78509-3|RELN;RELN|p.H3353Tfs*46|1|0.25|ENSG00000189056|chr7:103483777-103483777|G/-|frameshift_variant	10.865556482863946	0.4201028297492154	2				NaN	NaN	0	NaN	116	2158	2270
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2277	11.62	NaN	380.09	30	0	102.3	0.033	+			33473	RITGPLNQ	8	25	449.7584228515625	NaN	0	449.7584228515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RITGPLNQ_	ENST00000472942.5_1_9:133986989-133989557:+|nuORF	24.20275056022122	1.7418937515398478	2				NaN	NaN	0	NaN	117	2158	2270
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2281	11.634	NaN	1925.7	30	0	485.04	0.214	+			25929	LSGVKKKS	8	36	423.7739863982001	845.5334198632003	2	423.77362060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSGVKKKS_	ENSG00000205937|ENST00000320225|RNPS1;ENST00000563857.1_1_16:2314061-2314644:-|nuORF	50.0245360154114	0.5941082100236891	2				NaN	NaN	0	NaN	118	2161	2280
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2282	11.638	NaN	767.15	30	0	288.22	0.035				-1	HFKNGMAVA	9	18	495.7428407659159	NaN	0	495.74273681640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_HFKNGM(Oxidation (M))AVA_	ENSG00000116761|ENST00000370938|CTH;nc|ENSG00000116761|P32929-2|CTH;nc|ENSG00000116761|P32929-3|CTH	13.775330524044264	0.3903584932235582	2				NaN	NaN	0	NaN	119	2161	2280
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2290	11.658	NaN	17019	30	0	2884.2	0.214	+			42885	TEHAKRKTV	9	71	535.3095111110596	NaN	0	535.3095092773438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEHAKRKTV_	ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000275663|ENST00000611444|H4C7;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2	114.8945686534367	0.005276929498059453	2				NaN	NaN	0	NaN	124	2164	2289
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2291	11.662	NaN	5365.9	30	0	1638	0.106				-1	 	0	29	547.2884049794728	1092.5622570257456	2	547.2886352539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	125	2164	2289
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2292	11.663	NaN	4474	30	0	789.98	0.106				-1	VEDCKMMVR	9	42	584.2699158344751	NaN	0	584.2701416015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_VEDC(Carbamidomethyl (C))KMMVR_	ENST00000462009.6_1_3:48665195-48667128:-|nuORF;nc|ENSG00000225697|Q9BXS9-6|SLC26A6	20.94693142431847	0.3660861156085067	2				NaN	NaN	0	NaN	126	2164	2289
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2293	11.665	NaN	5947.7	30	0	1018.6	0.106	+			34258	RTHEHVSEK	9	66	561.7866123108937	1121.5586716885873	2	562.2882080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RTHEHVSEK_	CAST|p.E474Kfs*10|1|0.39|ENSG00000153113|chr5:96754695-96754695|A/-|frameshift_variant;ENSG00000153113|ENST00000675179|CAST;ENST00000507487.5_1_5:95998126-96062463:+|nuORF;ENST00000515160.5_1_5:95998126-96031662:+|nuORF;nc|ENSG00000153113|P20810-10|CAST;nc|ENSG00000153113|P20810-5|CAST;nc|ENSG00000153113|P20810-7|CAST;nc|ENSG00000153113|P20810-9|CAST	141.88618038797316	0.009595182862320563	2				NaN	NaN	0	NaN	127	2164	2289
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2294	11.667	NaN	5559.3	30	0	954.87	0.106	+			28002	MVVLHFLQK	9	44	557.8244273026102	NaN	0	557.7923583984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MVVLHFLQK_	ENSG00000113396|ENST00000262462|SLC27A6;SLC27A6|p.K104Rfs*8|1|0.38|ENSG00000113396|chr5:128966444-128966444|A/-|frameshift_variant	31.954861631926434	0.3162336699109506	2				NaN	NaN	0	NaN	128	2164	2289
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2295	11.669	NaN	1118.8	30	0	497.61	0.106			+	-1	KTAQLLIMP	9	24	515.8041381835938	NaN	0	515.8041381835938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_KTAQLLIM(Oxidation (M))P_	REV__ENSG00000116996|ENST00000366570|ZP4;REV__ZP4|p.G483C|1|0.33|ENSG00000116996|chr1:237882790-237882790|C/A|missense_variant;REV__ZP4|p.K482N|1|0.29|ENSG00000116996|chr1:237882791-237882791|T/A|missense_variant	29.14955571784316	0.3303970763161698	2				NaN	NaN	0	NaN	129	2164	2289
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2296	11.671	NaN	2479.1	30	0	569.72	0.037				-1	CMMMLLIMT	9	29	588.251708984375	NaN	0	588.251708984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C),2 Oxidation (M)	_C(Carbamidomethyl (C))M(Oxidation (M))MMLLIM(Oxidation (M))T_	ENST00000424889.7_1_16:30768276-30771618:+|nuORF	13.775330524044264	0.3903584932235582	2				NaN	NaN	0	NaN	130	2164	2289
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2303	11.689	NaN	4642.8	30	0	776.49	0.214	+			14736	GTKAQVERK	9	58	508.7958899919178	1015.5772270506357	2	508.7959899902344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTKAQVERK_	ENSG00000158769|ENST00000368026|F11R;ENST00000335772.3_1_1:160972398-160990872:-|nuORF;ENST00000602966.1_1_1:160970859-160990872:-|nuORF;nc|ENSG00000158769|Q9Y624-2|F11R	128.60217544463768	0.015992218256422188	2				NaN	NaN	0	NaN	134	2167	2302
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2304	11.692	NaN	3214.6	30	0	1125.7	0.106			+	29577	PFILAVEHD	9	23	520.7755164352764	NaN	0	520.7755126953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PFILAVEHD_	REV__ENSG00000104047|ENST00000403028|DTWD1;REV__nc|ENSG00000104047|Q8N5C7-2|DTWD1	11.511019455917149	0.3980220838287494	2				NaN	NaN	0	NaN	135	2167	2302
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2305	11.694	NaN	2983.7	30	0	580.55	0.106	+			11468	FNLTVKGHAK	10	44	557.8244273026102	NaN	0	557.7569580078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FNLTVKGHAK_	ENSG00000196591|ENST00000519065|HDAC2;nc|ENSG00000196591|Q92769-3|HDAC2	25.125986553469783	0.41767453237088564	2				NaN	NaN	0	NaN	136	2167	2302
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2306	11.696	NaN	1646.5	30	0	375.61	0.106				-1	FCVVRLVFMYL	11	28	731.8773818950958	NaN	0	731.8773193359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_FC(Carbamidomethyl (C))VVRLVFM(Oxidation (M))YL_	ENST00000464953.2_1_2:11927207-11932234:+|nuORF	10.865556482863946	0.456735970842152	2				NaN	NaN	0	NaN	137	2167	2302
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2307	11.698	NaN	2503.5	30	0	473.27	0.106			+	-1	YFMAEWFQ	8	27	569.2398071289062	NaN	0	569.2398071289062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_YFM(Oxidation (M))AEWFQ_	REV__ENSG00000100241|ENST00000380817|SBF1;REV__nc|ENSG00000100241|O95248-4|SBF1;REV__nc|ENSG00000100241|O95248|SBF1;REV__SBF1|p.L946Wfs*16|1|0.26|ENSG00000100241|chr22:50461526-50461526|G/-|frameshift_variant;REV__SBF1|p.S1077Afs*28|3|0.34|ENSG00000100241|chr22:50460327-50460327|G/-|frameshift_variant;REV__SBF1|p.S1077Qfs*11|2|0.34|ENSG00000100241|chr22:50460326-50460327|-/G|frameshift_variant	15.63621529709179	1.7418937515398478	2				NaN	NaN	0	NaN	138	2167	2302
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2308	11.7	NaN	2400.4	30	0	367.5	0.106				-1	TPICTGPYMV	10	35	549.2533453093674	1096.4921376855348	2	549.2542114257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_TPICTGPYM(Oxidation (M))V_	tr|U7STI5|U7STI5_FUSNUPeptide/nickeltransportsystemsubstrate-bindingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01497PE=4SV=1	30.503639358989545	0.6307262373768582	2				NaN	NaN	0	NaN	139	2167	2302
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2309	11.701	NaN	1123.1	30	0	247.86	0.037			+	-1	NESGISCLYC	10	24	573.2314453125	NaN	0	573.2314453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_NESGISCLYC(Carbamidomethyl (C))_	REV__FCAMR|p.G199S|1|0.17|ENSG00000162897|chr1:206962270-206962270|C/T|missense_variant	10.865556482863946	0.4201028297492154	2				NaN	NaN	0	NaN	140	2167	2302
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2314	11.716	NaN	2467.1	30	0	338.9	0.214	+			40321	STSTSSMKK	9	48	478.7404902976194	955.4664276620388	2	478.73956298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STSTSSMKK_	ENSG00000047849|ENST00000683076|MAP4;MAP4|p.R919Gfs*14|1|0.44|ENSG00000047849|chr3:47870917-47870917|G/-|frameshift_variant;MAP4|p.T960Qfs*35|1|0.3|ENSG00000047849|chr3:47869309-47869309|T/-|frameshift_variant;MAP4|p.V999*|1|0.25|ENSG00000047849|chr3:47867318-47867318|T/-|frameshift_variant;nc|ENSG00000047849|P27816-2|MAP4;nc|ENSG00000047849|P27816-4|MAP4;nc|ENSG00000047849|P27816-5|MAP4;nc|ENSG00000047849|P27816-6|MAP4;nc|ENSG00000047849|P27816|MAP4	56.72105179125745	0.24094814563026265	2				NaN	NaN	0	NaN	142	2170	2313
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2315	11.72	NaN	3141.4	30	0	1153.7	0.106	+			22570	KTSRCGLWA	9	43	511.2638750781149	1020.5131972230298	2	511.2646179199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTSRCGLWA_	ENSG00000129204|ENST00000574788|USP6;nc|ENSG00000129204|P35125-3|USP6;USP6|p.E983Gfs*34|1|0.12|ENSG00000129204|chr17:5162911-5162912|-/G|frameshift_variant;USP6|p.G465Afs*41|1|0.33|ENSG00000129204|chr17:5139566-5139566|G/-|frameshift_variant;USP6|p.H470Ifs*36|1|0.24|ENSG00000129204|chr17:5139580-5139580|C/-|frameshift_variant;USP6|p.L931Pfs*6|1|0.06|ENSG00000129204|chr17:5155567-5155568|CA/-|frameshift_variant;USP6|p.R1206Gfs*38|1|0.11|ENSG00000129204|chr17:5170574-5170574|G/-|frameshift_variant	29.14955571784316	0.5308295550522326	2				NaN	NaN	0	NaN	143	2170	2313
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2316	11.722	NaN	2698.8	30	0	491.72	0.106			+	31442	QKQQVALQQ	9	60	535.801513671875	NaN	0	535.801513671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QKQQVALQQ_	REV__ENSG00000139697|ENST00000602398|SBNO1;REV__nc|ENSG00000139697|A3KN83-2|SBNO1;REV__nc|ENSG00000139697|A3KN83-3|SBNO1	71.29570347882199	0.10120983364817086	2				NaN	NaN	0	NaN	144	2170	2313
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2317	11.723	NaN	1683.4	30	0	554.48	0.106				-1	EAEFIMSK	8	32	485.73070974899883	NaN	0	485.7307434082031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_EAEFIM(Oxidation (M))SK_	ENST00000371564.7_1_20:50004293-50004545:-|nuORF	23.04248740728303	1.7418937515398478	2				NaN	NaN	0	NaN	145	2170	2313
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2318	11.725	NaN	1584.6	30	0	289.75	0.106	+			20272	KENLRKDMER	10	30	659.8500501630982	NaN	0	659.8497924804688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KENLRKDMER_	ENSG00000188315|ENST00000343010|C3orf62	12.95748067046073	0.4201028297492154	2				NaN	NaN	0	NaN	146	2170	2313
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2319	11.727	NaN	1434.5	30	0	219.97	0.106	+			41530	SVPYGGIYVK	10	33	541.7960815429688	NaN	0	541.7960815429688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVPYGGIYVK_	ENSG00000170324|ENST00000374201|FRMPD2;nc|ENSG00000170324|Q68DX3-2|FRMPD2	23.04248740728303	0.42010282974921537	2				NaN	NaN	0	NaN	147	2170	2313
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2320	11.729	NaN	2322.4	30	0	294.58	0.035			+	-1	FMLPFVEM	8	32	523.2401680035562	1044.4657830739122	2	523.2427978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Oxidation (M)	_FM(Oxidation (M))LPFVEM(Oxidation (M))_	REV__PRAMEF17|p.R33M|1|0.28|ENSG00000204479|chr1:13389755-13389755|G/T|missense_variant	14.664097394203935	0.7913966407026132	2				NaN	NaN	0	NaN	148	2170	2313
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2327	11.747	NaN	9144.3	30	0	3147.7	0.214	+			9953	ERDDRKKK	8	54	537.8046765262153	1073.5948001192305	2	537.8048095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ERDDRKKK_	RBM27|p.G113D|1|0.29|ENSG00000091009|chr5:146228980-146228980|G/A|missense_variant	60.11826168202944	0.5006107059937851	2				NaN	NaN	0	NaN	152	2173	2326
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2328	11.75	NaN	4985.8	30	0	1267.2	0.106			+	39451	STEKRLFSM	9	32	549.7844383160758	1097.5543236989515	2	549.783935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STEKRLFSM_	REV__ENSG00000182334|ENST00000641167|OR5P3	18.262085536374414	0.6112419832031293	2				NaN	NaN	0	NaN	153	2173	2326
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2329	11.752	NaN	3432.3	30	0	396.77	0.106			+	10699	EYWEAIGGTF	10	39	586.764597471243	NaN	0	586.7644653320312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EYWEAIGGTF_	REV__ENSG00000162909|ENST00000295006|CAPN2;REV__nc|ENSG00000162909|P17655-2|CAPN2	26.69291269510374	0.4125295221340092	2				NaN	NaN	0	NaN	154	2173	2326
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2330	11.754	NaN	721.4	30	0	317.79	0.106	+			41160	SVKIKKNK	8	22	472.8160705566406	NaN	0	472.8160705566406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVKIKKNK_	ENSG00000172809|ENST00000311111|RPL38	4.316272785109212	1.7418937515398478	2				NaN	NaN	0	NaN	155	2173	2326
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2331	11.756	NaN	1617.5	30	0	403.27	0.106	+			3971	ATATPSKTR	9	34	466.76161552073955	931.5086781082791	2	466.7608337402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATATPSKTR_	ENSG00000117983|ENST00000529681|MUC5B;ENSG00000117983|ENST00000529681|MUC5B;ENSG00000117983|ENST00000529681|MUC5B;ENSG00000117983|ENST00000529681|MUC5B;MUC5B|p.E2447Vfs*233|1|0.15|ENSG00000117983|chr11:1244218-1244219|TG/-|frameshift_variant;MUC5B|p.E2929Gfs*98|1|0.13|ENSG00000117983|chr11:1245660-1245661|-/GC|frameshift_variant;MUC5B|p.E2929Gfs*98|1|0.13|ENSG00000117983|chr11:1245660-1245661|-/GC|frameshift_variant;MUC5B|p.P2717Qfs*3|2|0.21|ENSG00000117983|chr11:1245025-1245025|C/-|frameshift_variant;MUC5B|p.P3417Qfs*3|1|0.41|ENSG00000117983|chr11:1247125-1247125|C/-|frameshift_variant;MUC5B|p.P3417Qfs*3|1|0.41|ENSG00000117983|chr11:1247125-1247125|C/-|frameshift_variant;MUC5B|p.S3126Pfs*13|1|0.37|ENSG00000117983|chr11:1246251-1246251|C/-|frameshift_variant;MUC5B|p.S3126Pfs*13|1|0.37|ENSG00000117983|chr11:1246251-1246251|C/-|frameshift_variant;MUC5B|p.S3878Pfs*27|1|0.13|ENSG00000117983|chr11:1248507-1248507|C/-|frameshift_variant;MUC5B|p.S3878Pfs*27|1|0.13|ENSG00000117983|chr11:1248507-1248507|C/-|frameshift_variant;MUC5B|p.S3878Pfs*27|1|0.13|ENSG00000117983|chr11:1248507-1248507|C/-|frameshift_variant;MUC5B|p.S4017Lfs*56|1|0.22|ENSG00000117983|chr11:1248928-1248929|-/C|frameshift_variant;MUC5B|p.S4017Lfs*56|1|0.22|ENSG00000117983|chr11:1248928-1248929|-/C|frameshift_variant;MUC5B|p.S4017Lfs*56|1|0.22|ENSG00000117983|chr11:1248928-1248929|-/C|frameshift_variant;MUC5B|p.T4706Pfs*4|2|0.37|ENSG00000117983|chr11:1250996-1250996|A/-|frameshift_variant;MUC5B|p.T4706Pfs*4|2|0.37|ENSG00000117983|chr11:1250996-1250996|A/-|frameshift_variant;MUC5B|p.T4706Pfs*4|2|0.37|ENSG00000117983|chr11:1250996-1250996|A/-|frameshift_variant;MUC5B|p.T4706Pfs*4|2|0.37|ENSG00000117983|chr11:1250996-1250996|A/-|frameshift_variant	51.19269402634007	0.2889735674168909	2				NaN	NaN	0	NaN	156	2173	2326
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2332	11.758	NaN	1448.3	30	0	291.7	0.106			+	-1	VDPDAHKAAMG	11	24	564.2604076985588	1126.5062624639174	2	564.26025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_VDPDAHKAAM(Oxidation (M))G_	REV__ENST00000447530.5_1_X:151883158-151884479:+|nuORF	10.265252068803164	0.8224230327593429	2				NaN	NaN	0	NaN	157	2173	2326
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2333	11.76	NaN	1668.9	30	0	361.77	0.038			+	-1	FQSMCGAPHTI	11	18	604.266351032387	NaN	0	604.2676391601562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_FQSM(Oxidation (M))CGAPHTI_	REV__ENSG00000257093|ENST00000536163|DENND11	8.235088202721068	0.456735970842152	2				NaN	NaN	0	NaN	158	2173	2326
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2340	11.777	NaN	680.63	30	0	167.41	0.211	+			50069	WFWILWRFWH	10	24	788.9016263994423	1575.7886998656845	2	789.400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WFWILWRFWH_	ENSG00000090266|ENST00000247866|NDUFB2	2.027967841256958	0.7942219231794858	2				NaN	NaN	0	NaN	162	2176	2339
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2341	11.781	NaN	2820.9	30	0	1230.6	0.034				-1	RICAPVQQ	8	24	486.2589636773884	970.5033744215768	2	486.2587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_RIC(Carbamidomethyl (C))APVQQ_	ENST00000251076.9_1_15:51914954-51915020:-|nuORF	18.324413293986947	0.7971860551947066	2				NaN	NaN	0	NaN	163	2176	2339
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2346	11.796	NaN	7487.4	30	0	2812.5	0.214			+	28445	NEYEEELQ	8	22	527.2215841100011	1052.4286152868021	2	527.2208862304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NEYEEELQ_	REV__DSP|p.Y787Lfs*2|1|0.17|ENSG00000096696|chr6:7574715-7574716|-/T|frameshift_variant;REV__ENSG00000096696|ENST00000379802|DSP;REV__ENST00000506617.1_1_6:7559609-7565825:+|nuORF;REV__nc|ENSG00000096696|P15924-2|DSP;REV__nc|ENSG00000096696|P15924-3|DSP	19.359975847455235	0.7988239741663654	2				NaN	NaN	0	NaN	165	2179	2345
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2347	11.799	NaN	6406.4	30	0	1527.6	0.106	+			3499	ASSKDAIKK	9	59	474.2797192277627	946.5448855223254	2	474.27978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASSKDAIKK_	DSTN|p.Y117H|1|0.26|ENSG00000125868|chr20:17604592-17604592|T/C|missense_variant;ENSG00000125868|ENST00000246069|DSTN;ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000400899.2_1_1:11051144-11051557:-|nuORF;ENST00000530945.1_1_11:65623104-65623215:-|nuORF;nc|ENSG00000125868|P60981-2|DSTN;nc|ENSG00000165410|Q9Y281-3|CFL2	93.5975768576971	0.05472259948179787	2				NaN	NaN	0	NaN	166	2179	2345
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2348	11.801	NaN	2778.6	30	0	857.01	0.106				-1	RALCLFPR	8	31	344.86452070731576	1031.5717327221473	3	344.86468505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_RALC(Carbamidomethyl (C))LFPR_	ENSG00000113845|ENST00000494664|TIMMDC1	12.959181472943097	0.7887000251064199	2				NaN	NaN	0	NaN	167	2179	2345
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2349	11.803	NaN	5057.1	30	0	1442.6	0.106				-1	 	0	59	516.7937320073337	1031.5729110814673	2	516.7938842773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	168	2179	2345
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2350	11.805	NaN	12150	30	0	3136.3	0.106				-1	KYRCNHCS	8	59	534.2292651797126	1066.443977426225	2	534.2288818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_KYRCNHC(Carbamidomethyl (C))S_	ENSG00000091656|ENST00000651372|ZFHX4;nc|ENSG00000091656|Q86UP3-2|ZFHX4;nc|ENSG00000091656|Q86UP3-4|ZFHX4;nc|ENSG00000091656|Q86UP3|ZFHX4;ZFHX4|p.D2246*|1|0.34|ENSG00000091656|chr8:76853650-76853651|-/T|frameshift_variant;ZFHX4|p.H1565Tfs*5|1|0.28|ENSG00000091656|chr8:76851613-76851613|T/-|frameshift_variant;ZFHX4|p.I2143Nfs*7|1|0.31|ENSG00000091656|chr8:76853343-76853344|-/A|frameshift_variant;ZFHX4|p.K1442Nfs*10|1|0.18|ENSG00000091656|chr8:76851241-76851241|A/-|frameshift_variant;ZFHX4|p.K1867Nfs*7|1|0.09|ENSG00000091656|chr8:76852518-76852518|A/-|frameshift_variant;ZFHX4|p.L1719Cfs*6|1|0.13|ENSG00000091656|chr8:76852073-76852073|T/-|frameshift_variant;ZFHX4|p.P2056Hfs*26|1|0.19|ENSG00000091656|chr8:76853081-76853084|CCTC/-|frameshift_variant;ZFHX4|p.P2056Tfs*82|1|0.25|ENSG00000091656|chr8:76853079-76853083|CTCCT/-|frameshift_variant;ZFHX4|p.P2057Hfs*26|2|0.17|ENSG00000091656|chr8:76853084-76853084|C/-|frameshift_variant;ZFHX4|p.Q1674Afs*4|1|0.14|ENSG00000091656|chr8:76851934-76851935|-/A|frameshift_variant;ZFHX4|p.R2647Gfs*44|1|0.25|ENSG00000091656|chr8:76854854-76854854|A/-|frameshift_variant;ZFHX4|p.Y3286Ifs*70|1|0.46|ENSG00000091656|chr8:76863562-76863563|-/G|frameshift_variant	18.324413293986947	0.7971860551947066	2				NaN	NaN	0	NaN	169	2179	2345
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2351	11.807	NaN	8508.7	30	0	1721.2	0.106			+	-1	LFLCPFSCGS	10	54	565.7536311781872	NaN	0	565.7535400390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_LFLCPFSC(Carbamidomethyl (C))GS_	REV__ENST00000412872.3_1_6:68598425-68598952:-|nuORF	23.04248740728303	0.42010282974921537	2				NaN	NaN	0	NaN	170	2179	2345
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2352	11.808	NaN	11264	30	0	4596.3	0.035				-1	RCGSHLQK	8	59	493.25319790898914	984.4918428847783	2	493.25048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_RC(Carbamidomethyl (C))GSHLQK_	ENSG00000132010|ENST00000334213|ZNF20	66.42927471994793	0.4381325844043345	2				NaN	NaN	0	NaN	171	2179	2345
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2357	11.822	NaN	59972	30	0	25701	0.196			+	51363	YTEMSELK	8	71	500.73580931491995	999.4570656966399	2	500.7353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YTEMSELK_	REV__ENSG00000136381|ENST00000258886|IREB2;REV__IREB2|p.F724Lfs*48|1|0.13|ENSG00000136381|chr15:78490512-78490512|T/-|frameshift_variant	30.503639358989545	0.7238069182250283	2				NaN	NaN	0	NaN	173	2182	2356
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2358	11.825	NaN	89293	30	0	40939	0.106				-1	MRIVMGSW	8	61	506.2391182126099	1010.4636834920199	2	506.7401123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Oxidation (M)	_M(Oxidation (M))RIVM(Oxidation (M))GSW_	ENSG00000182771|ENST00000327946|GRID1;nc|ENSG00000182771|Q9ULK0-2|GRID1	37.028477286268924	0.6747514403204248	2				NaN	NaN	0	NaN	174	2182	2356
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2359	11.827	NaN	143510	30	0	74284	0.106	+			34429	RTVGVSKKK	9	116	334.8855728900081	NaN	0	334.8853759765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RTVGVSKKK_	ENSG00000231500|ENST00000439602|RPS18;ENST00000412454.1_1_17:14608395-14608521:-|nuORF	123.20810148215591	0.0016355521601317592	2				NaN	NaN	0	NaN	175	2182	2356
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2360	11.829	NaN	113830	30	0	38002	0.106	+			34276	RTKHCRLI	8	75	513.8037068593227	1025.5928607854453	2	513.8037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RTKHCRLI_	ENST00000264668.6_1_5:7873570-7875415:+|nuORF	44.53106598305862	0.628196326904373	2				NaN	NaN	0	NaN	176	2182	2356
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2361	11.831	NaN	66819	30	0	14306	0.106			+	7102	CWSYGESYD	9	73	555.1980962367551	1108.38163954031	2	555.1979370117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_CWSYGESYD_	REV__ENSG00000197921|ENST00000378453|HES5	18.324413293986947	0.6112419832031293	2				NaN	NaN	0	NaN	177	2182	2356
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2362	11.833	NaN	53494	30	0	24780	0.106			+	11424	FLSSYWER	8	46	544.2644073010129	1086.5142616688256	2	544.2644653320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FLSSYWER_	REV__ENSG00000214013|ENST00000318010|GANC;REV__ENST00000567421.1_1_15:42570725-42619667:+|nuORF;REV__GANC|p.A495V|1|0.19|ENSG00000214013|chr15:42327426-42327426|C/T|missense_variant	29.14955571784316	0.7342621283720113	2				NaN	NaN	0	NaN	178	2182	2356
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2363	11.835	NaN	54877	30	0	19277	0.037			+	2778	ARPPQYFQQ	9	65	567.7879683306686	1133.5613837281371	2	567.7874755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ARPPQYFQQ_	REV__ENSG00000083544|ENST00000377881|TDRD3;REV__nc|ENSG00000083544|Q9H7E2-2|TDRD3;REV__nc|ENSG00000083544|Q9H7E2|TDRD3	23.04248740728303	0.5879033540491928	2				NaN	NaN	0	NaN	179	2182	2356
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2374	11.858	NaN	64368	30	0	25230	0.214			+	-1	MQFSLFSC	8	64	518.2174758585766	1034.420398783953	2	518.216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))QFSLFSC(Carbamidomethyl (C))_	REV__ENST00000492718.1_1_1:110257466-110258024:+|nuORF	38.80614096846853	0.6637206697844082	2				NaN	NaN	0	NaN	187	2185	2373
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2375	11.861	NaN	39292	30	0	5761.7	0.106	+			21017	KKIGDEYFT	9	73	550.7850481996085	1099.5555434660168	2	550.7849731445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KKIGDEYFT_	CCT3|p.A379Lfs*9|1|0.21|ENSG00000163468|chr1:156312061-156312061|C/-|frameshift_variant;ENSG00000163468|ENST00000295688|CCT3;nc|ENSG00000163468|P49368-2|CCT3	35.61828744233558	0.47037581924408073	2				NaN	NaN	0	NaN	188	2185	2373
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2376	11.863	NaN	50357	30	0	17833	0.106			+	-1	WSYTMDMGA	9	62	547.2012175537161	1092.3878821742321	2	547.2001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Oxidation (M)	_WSYTM(Oxidation (M))DM(Oxidation (M))GA_	REV__ENSG00000162723|ENST00000368093|SLAMF9	40.5726180659479	0.4135428067754104	2				NaN	NaN	0	NaN	189	2185	2373
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2377	11.865	NaN	30891	30	0	6353.7	0.106				-1	FQCPVCCF	8	60	559.2160215006073	1116.4174900680146	2	559.2164306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	3 Carbamidomethyl (C)	_FQC(Carbamidomethyl (C))PVC(Carbamidomethyl (C))C(Carbamidomethyl (C))F_	ENST00000257527.8_2_5:156905371-156905707:-|nuORF	28.2542754592877	0.7411748056684583	2				NaN	NaN	0	NaN	190	2185	2373
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2378	11.867	NaN	8124.6	30	0	4043	0.106				-1	 	0	45	323.71582492683626	645.4170969204725	2	323.7159118652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	191	2185	2373
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2379	11.869	NaN	6815.9	30	0	1195.8	0.106	+			22052	KSKAGRPIK	9	67	328.88165571897	983.62313775711	3	328.88189697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KSKAGRPIK_	ENST00000462537.3_1_6:36646575-36648628:+|nuORF	66.96192283764107	0.15557981141143568	2				NaN	NaN	0	NaN	192	2185	2373
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2380	11.87	NaN	15191	30	0	6795	0.034			+	-1	GHCIGPGKK	9	62	477.25323364567595	952.4919143581519	2	477.2536315917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_GHC(Carbamidomethyl (C))IGPGKK_	REV__ENSG00000147036|ENST00000378619|LANCL3;REV__nc|ENSG00000147036|Q6ZV70-2|LANCL3	50.0245360154114	0.3026755932229825	2				NaN	NaN	0	NaN	193	2185	2373
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2381	11.871	NaN	34182	30	0	7840.9	0.142				-1	CLSLEDCGSM	10	52	594.2249802680099	1186.4354076028196	2	594.2265014648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	2 Carbamidomethyl (C),Oxidation (M)	_C(Carbamidomethyl (C))LSLEDC(Carbamidomethyl (C))GSM(Oxidation (M))_	ENST00000523679.1_1_8:141931202-141935700:-|nuORF	20.94693142431847	0.7087701759873708	2				NaN	NaN	0	NaN	194	2185	2373
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2385	11.886	NaN	40265	30	0	13977	0.214			+	-1	CSCCYWKQ	8	62	539.2015828164024	1076.3886126996047	2	539.2027587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_C(Carbamidomethyl (C))SCCYWKQ_	REV__ENST00000261667.7_1_13:50274468-50274537:-|nuORF	35.200714571348534	0.6875396545722289	2				NaN	NaN	0	NaN	195	2188	2384
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2386	11.89	NaN	38199	30	0	9994.7	0.106	+			8717	EEEEGCGHTH	10	57	564.205144099636	1126.3957352660718	2	564.2060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EEEEGCGHTH_	ENSG00000204619|ENST00000376772|PPP1R11	32.81241826257853	0.6118718159329168	2				NaN	NaN	0	NaN	196	2188	2384
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2387	11.892	NaN	17864	30	0	1836.7	0.106				-1	 	0	54	648.0088561656974	1941.0047390972918	3	648.3429565429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	197	2188	2384
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2388	11.893	NaN	27132	30	0	4495.2	0.106			+	34424	RTTMMGSSAKS	11	57	578.7770886495197	1155.5396243658392	2	578.77734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RTTMMGSSAKS_	REV__ENST00000569795.5_1_15:72558271-72559838:-|nuORF	25.125986553469783	0.7262400895305658	2				NaN	NaN	0	NaN	198	2188	2384
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2389	11.895	NaN	21413	30	0	4434.5	0.106				-1	CCHLCSACHS	10	54	589.2029314608577	1176.3913099885153	2	589.2029418945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C)	_CCHLC(Carbamidomethyl (C))SAC(Carbamidomethyl (C))HS_	ENST00000459686.5_1_17:27944343-27944613:-|nuORF	20.94693142431847	0.7087701759873708	2				NaN	NaN	0	NaN	199	2188	2384
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2390	11.897	NaN	18272	30	0	4162.8	0.106				-1	CFDCPGCMHT	10	47	614.2045552262535	1226.394557519307	2	614.2041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Carbamidomethyl (C)	_CFDC(Carbamidomethyl (C))PGC(Carbamidomethyl (C))MHT_	ENSG00000132912|ENST00000447998|DCTN4;ENST00000519313.5_1_5:150110976-150138143:-|nuORF;nc|ENSG00000132912|Q9UJW0-2|DCTN4;nc|ENSG00000132912|Q9UJW0-3|DCTN4	10.265252068803164	0.7642865340254049	2				NaN	NaN	0	NaN	200	2188	2384
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2391	11.899	NaN	33885	30	0	7286.5	0.037				-1	SMCSCSLCCGV	11	71	583.1917679560817	NaN	0	583.1906127929688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C),Oxidation (M)	_SM(Oxidation (M))CSC(Carbamidomethyl (C))SLCCGV_	ENST00000298440.5_1_13:97639444-97639594:-|nuORF	19.996771675451527	0.456735970842152	2				NaN	NaN	0	NaN	201	2188	2384
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2397	11.913	NaN	9551.9	30	0	1797.3	0.215	+			21677	KQDSNNKK	8	68	481.2564394564231	960.4983259796462	2	481.2567138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KQDSNNKK_	ENSG00000174948|ENST00000389740|GPR149;GPR149|p.I582Nfs*6|1|0.33|ENSG00000174948|chr3:154338150-154338151|-/T|frameshift_variant	102.7733458925114	0.2491487235419157	2				NaN	NaN	0	NaN	204	2191	2396
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2398	11.917	NaN	10512	30	0	2609.5	0.106			+	-1	CRMCMTVM	8	47	560.7083931273311	1119.402233321462	2	560.70849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C),2 Oxidation (M)	_C(Carbamidomethyl (C))RMC(Carbamidomethyl (C))M(Oxidation (M))TVM(Oxidation (M))_	REV__ENSG00000146192|ENST00000274963|FGD2;REV__ENST00000464083.5_1_6:36982408-36995936:+|nuORF;REV__ENST00000487920.1_1_6:36989957-36995408:+|nuORF;REV__ENST00000493635.1_1_6:36982749-36990230:+|nuORF;REV__ENST00000494343.5_1_6:36981367-36995936:+|nuORF;REV__FGD2|p.K560Qfs*14|1|0.4|ENSG00000146192|chr6:37027495-37027496|-/G|frameshift_variant;REV__nc|ENSG00000146192|Q7Z6J4-2|FGD2;REV__nc|ENSG00000146192|Q7Z6J4-4|FGD2	24.20275056022122	0.7724576178584145	2				NaN	NaN	0	NaN	205	2191	2396
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2399	11.919	NaN	15261	30	0	4734.5	0.106			+	21623	KPRALVCH	8	50	462.2664157576895	922.518278582179	2	462.2665710449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KPRALVCH_	REV__ENSG00000162849|ENST00000407071|KIF26B;REV__KIF26B|p.A1835Pfs*41|1|0.22|ENSG00000162849|chr1:245688480-245688480|G/-|frameshift_variant;REV__nc|ENSG00000162849|Q2KJY2-2|KIF26B	42.47446043378293	0.6409579893742323	2				NaN	NaN	0	NaN	206	2191	2396
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2400	11.921	NaN	8639	30	0	2023.6	0.106			+	-1	RSCPVDFMEG	10	37	591.7486345346852	1181.4827161361702	2	591.7473754882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))RSCPVDFMEG_	REV__ENSG00000174473|ENST00000506823|GALNTL6;REV__GALNTL6|p.E457Gfs*33|1|0.2|ENSG00000174473|chr4:172952250-172952251|-/G|frameshift_variant;REV__GALNTL6|p.G352V|1|0.14|ENSG00000174473|chr4:172931174-172931174|G/T|missense_variant;REV__GALNTL6|p.R515Gfs*22|1|0.21|ENSG00000174473|chr4:173021528-173021528|C/-|frameshift_variant;REV__GALNTL6|p.V375Kfs*20|1|0.04|ENSG00000174473|chr4:172931240-172931241|-/GAAAGGAATAATC|frameshift_variant;REV__nc|ENSG00000174473|Q49A17-2|GALNTL6	29.14955571784316	0.6417842315402807	2				NaN	NaN	0	NaN	207	2191	2396
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2401	11.923	NaN	4464.1	30	0	900.12	0.106			+	37929	SPEEDCPMNES	11	37	619.2205200195312	NaN	0	619.2205200195312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SPEEDCPMNES_	REV__ENSG00000183495|ENST00000389561|EP400;REV__EP400|p.P2793Rfs*46|1|0.3|ENSG00000183495|chr12:132064707-132064707|C/-|frameshift_variant;REV__nc|ENSG00000183495|Q96L91-3|EP400;REV__nc|ENSG00000183495|Q96L91-4|EP400;REV__nc|ENSG00000183495|Q96L91-5|EP400;REV__nc|ENSG00000183495|Q96L91|EP400	16.71738777980365	0.456735970842152	2				NaN	NaN	0	NaN	208	2191	2396
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2402	11.924	NaN	3790.5	30	0	676.33	0.106			+	-1	ECMPTCTCMC	10	29	626.1832885742188	NaN	0	626.1832885742188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Carbamidomethyl (C),Oxidation (M)	_EC(Carbamidomethyl (C))MPTCTC(Carbamidomethyl (C))M(Oxidation (M))C_	REV__ENST00000544665.7_1_16:31343047-31343377:+|nuORF	6.735540347417125	0.42010282974921537	2				NaN	NaN	0	NaN	209	2191	2396
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2403	11.926	NaN	5356.3	30	0	1348	0.038				-1	CCCQMCCGP	9	30	596.1646728515625	NaN	0	596.1646728515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	4 Carbamidomethyl (C),Oxidation (M)	_C(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))QM(Oxidation (M))C(Carbamidomethyl (C))CGP_	ENSG00000166448|ENST00000339375|TMEM130;nc|ENSG00000166448|Q8N3G9-3|TMEM130;nc|ENSG00000166448|Q8N3G9|TMEM130	4.316272785109212	0.4072763090772754	2				NaN	NaN	0	NaN	210	2191	2396
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2414	11.952	NaN	8095	30	0	2857.4	0.214				-1	 	0	57	498.73827984510194	995.4620067570039	2	499.2467956542969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	218	2194	2413
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2415	11.956	NaN	4545.7	30	0	1601.9	0.106	+			20730	KGTDIMYTG	9	28	493.2355428038765	984.456532674553	2	493.23541259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KGTDIMYTG_	ENSG00000005022|ENST00000317881|SLC25A5;ENST00000406156.2_1_6:121975405-121975696:+|nuORF;ENST00000463551.1_1_X:118604271-118605018:+|nuORF	23.04248740728303	0.5879033540491928	2				NaN	NaN	0	NaN	219	2194	2413
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2416	11.958	NaN	6955.4	30	0	941.21	0.106			+	31382	QKGPAKTNKK	10	63	550.3331412141248	1098.6517294950495	2	550.333251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QKGPAKTNKK_	REV__ENSG00000112419|ENST00000440869|PHACTR2;REV__nc|ENSG00000112419|O75167|PHACTR2;REV__PHACTR2|p.L340Sfs*4|2|0.36|ENSG00000112419|chr6:143765608-143765609|-/C|frameshift_variant;REV__PHACTR2|p.P339Lfs*30|1|0.33|ENSG00000112419|chr6:143765609-143765609|C/-|frameshift_variant;REV__PHACTR2|p.T229Qfs*47|1|0.32|ENSG00000112419|chr6:143765277-143765277|A/-|frameshift_variant	43.650786325866115	0.5155049133366767	2				NaN	NaN	0	NaN	220	2194	2413
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2417	11.959	NaN	3308.4	30	0	853.64	0.106			+	29625	PGASSLVQSGR	11	36	529.782940482193	1057.551328031186	2	530.2173461914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PGASSLVQSGR_	REV__ENST00000562760.1_1_8:95651187-95651544:-|nuORF	17.468008924990375	0.788697330333842	2				NaN	NaN	0	NaN	221	2194	2413
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2418	11.961	NaN	1102.4	30	0	301.26	0.106			+	-1	LCVYLDVA	8	26	476.7437487587895	NaN	0	476.7430114746094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_LC(Carbamidomethyl (C))VYLDVA_	REV__ENSG00000117139|ENST00000367265|KDM5B;REV__nc|ENSG00000117139|Q9UGL1-2|KDM5B	14.664097394203935	1.7418937515398478	2				NaN	NaN	0	NaN	222	2194	2413
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2419	11.963	NaN	4102.4	30	0	918.14	0.106			+	-1	CRYYCGTC	8	28	541.6980354500904	1081.3815179669807	2	541.6983032226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))RYYC(Carbamidomethyl (C))GTC_	REV__ENSG00000140995|ENST00000563594|DEF8;REV__nc|ENSG00000140995|Q6ZN54-3|DEF8;REV__nc|ENSG00000140995|Q6ZN54-4|DEF8;REV__nc|ENSG00000140995|Q6ZN54-6|DEF8;REV__nc|ENSG00000140995|Q6ZN54|DEF8	8.822329726475273	0.7821568878176242	2				NaN	NaN	0	NaN	223	2194	2413
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2420	11.965	NaN	2598.9	30	0	689.56	0.035			+	33976	RSFFLPGLC	9	25	520.271454376673	NaN	0	520.2715454101562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RSFFLPGLC_	REV__ENSG00000138346|ENST00000358410|DNA2;REV__nc|ENSG00000138346|P51530-4|DNA2	14.664097394203935	0.38735045005659413	2				NaN	NaN	0	NaN	224	2194	2413
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2425	11.979	NaN	5780.2	30	0	1744.8	0.214				-1	KMDDYLKM	8	64	538.2443404013738	1074.4741278695476	2	538.2440185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_KM(Oxidation (M))DDYLKM(Oxidation (M))_	tr|U7T185|U7T185_FUSNUTriggerfactorOS=FusobacteriumnucleatumCTI-5OX=1316586GN=tigPE=3SV=1	71.29570347882199	0.39610197767395533	2				NaN	NaN	0	NaN	226	2197	2424
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2426	11.983	NaN	5802	30	0	1947.6	0.106			+	7471	DGAPSATAPQP	11	60	506.2391182126099	1010.4636834920199	2	507.2695007324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DGAPSATAPQP_	REV__ENSG00000105717|ENST00000251203|PBX4;REV__ENST00000557978.6_1_19:19672836-19680924:-|nuORF	33.921630207806714	0.6339809607503234	2				NaN	NaN	0	NaN	227	2197	2424
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2427	11.985	NaN	3952.6	30	0	1476.3	0.106				-1	LMLDSASLAG	10	25	497.24934020620213	992.4841274792043	2	497.2494201660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_LM(Oxidation (M))LDSASLAG_	ENSG00000239732|ENST00000360658|TLR9;nc|ENSG00000239732|Q9NR96-2|TLR9;nc|ENSG00000239732|Q9NR96-3|TLR9;nc|ENSG00000239732|Q9NR96-4|TLR9;nc|ENSG00000239732|Q9NR96-5|TLR9;TLR9|p.G719Afs*37|1|0.18|ENSG00000239732|chr3:52222162-52222162|G/-|frameshift_variant	16.473147378115264	0.7327422906225664	2				NaN	NaN	0	NaN	228	2197	2424
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2428	11.987	NaN	3868.2	30	0	938.15	0.106				-1	 	0	57	550.2234896161716	549.2162131495716	1	550.2229614257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	229	2197	2424
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2429	11.989	NaN	1072.4	30	0	143.84	0.106			+	-1	APVLVPSCAP	10	30	337.5169725560458	1009.5290882683374	3	338.5146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_APVLVPSC(Carbamidomethyl (C))AP_	REV__ENSG00000080603|ENST00000262518|SRCAP;REV__nc|ENSG00000080603|Q6ZRS2-2|SRCAP;REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP;REV__SRCAP|p.K2179Rfs*128|1|0.2|ENSG00000080603|chr16:30733930-30733930|A/-|frameshift_variant;REV__SRCAP|p.L2975*|1|0.31|ENSG00000080603|chr16:30738960-30738960|C/-|frameshift_variant;REV__SRCAP|p.P1878Hfs*89|2|0.36|ENSG00000080603|chr16:30725050-30725050|C/-|frameshift_variant;REV__SRCAP|p.P1879Tfs*21|1|0.46|ENSG00000080603|chr16:30725049-30725050|-/C|frameshift_variant;REV__SRCAP|p.R1871Gfs*96|1|0.19|ENSG00000080603|chr16:30725031-30725031|C/-|frameshift_variant;REV__SRCAP|p.R2548Efs*3|1|0.36|ENSG00000080603|chr16:30737668-30737669|-/C|frameshift_variant;REV__SRCAP|p.S1859Afs*108|1|0.25|ENSG00000080603|chr16:30724993-30724993|C/-|frameshift_variant	18.262085536374414	0.7236521404371882	2				NaN	NaN	0	NaN	230	2197	2424
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2430	11.99	NaN	2667.9	30	0	899.63	0.106			+	-1	SCYTTNTGSC	10	25	547.2012175537161	1092.3878821742321	2	547.7017822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_SCYTTNTGSC(Carbamidomethyl (C))_	REV__nc|ENSG00000138100|Q9BYV2-2|TRIM54	14.864876125193954	0.7409144161711139	2				NaN	NaN	0	NaN	231	2197	2424
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2431	11.992	NaN	1515.3	30	0	461.5	0.033	+			14655	GTIAKSGTK	9	44	431.75337697842156	861.4922010236431	2	431.7532653808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GTIAKSGTK_	ENSG00000080824|ENST00000216281|HSP90AA1;ENSG00000096384|ENST00000371646|HSP90AB1;HSP90AA1|p.K419Nfs*3|1|0.25|ENSG00000080824|chr14:102083874-102083874|T/-|frameshift_variant;HSP90AA1|p.S330Qfs*48|1|0.21|ENSG00000080824|chr14:102084558-102084558|A/-|frameshift_variant;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000224411|Q14568|HSP90AA2P	61.691277971877994	0.19951612995419254	2				NaN	NaN	0	NaN	232	2197	2424
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2439	12.012	NaN	2814.7	30	0	288.55	0.211	+			16257	HEENLKTKKQQ	11	60	691.87388437753	1381.7332158218599	2	691.8726806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HEENLKTKKQQ_	ENSG00000136942|ENST00000348462|RPL35;ENST00000373570.8_1_9:127620199-127620799:-|nuORF;ENST00000433398.1_1_7:66071742-66071856:-|nuORF;ENST00000487431.1_1_9:127620199-127623861:-|nuORF	79.03558427241974	0.16041291136517336	2				NaN	NaN	0	NaN	237	2200	2438
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2440	12.015	NaN	864.32	30	0	291.58	0.106			+	-1	QSMAMLVQQ	9	28	351.1692027405995	NaN	0	351.16900634765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_QSM(Oxidation (M))AMLVQQ_	REV__ENSG00000116747|ENST00000400968|RO60;REV__nc|ENSG00000116747|P10155-3|RO60;REV__nc|ENSG00000116747|P10155-4|RO60;REV__nc|ENSG00000116747|P10155-5|RO60	32.81241826257853	0.3119040447479903	2				NaN	NaN	0	NaN	238	2200	2438
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2441	12.017	NaN	3503.6	30	0	734.45	0.106			+	-1	FMSSCSNSF	9	35	541.6980354500904	1081.3815179669807	2	541.275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_FM(Oxidation (M))SSC(Carbamidomethyl (C))SNSF_	REV__ENSG00000001460|ENST00000337248|STPG1;REV__ENST00000497384.1_1_1:24696162-24710359:-|nuORF;REV__nc|ENSG00000001460|Q5TH74-2|STPG1;REV__nc|ENSG00000001460|Q5TH74-3|STPG1	17.364965105453717	0.6112419832031293	2				NaN	NaN	0	NaN	239	2200	2438
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2442	12.019	NaN	2433	30	0	1036.5	0.106			+	-1	SVVKCLFTG	9	31	337.5169725560458	1009.5290882683374	3	337.5171203613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_SVVKC(Carbamidomethyl (C))LFTG_	REV__ENSG00000163464|ENST00000295683|CXCR1;REV__ENSG00000180871|ENST00000318507|CXCR2	19.996771675451527	0.6112419832031292	2				NaN	NaN	0	NaN	240	2200	2438
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2443	12.021	NaN	2444	30	0	456.91	0.036	+			13714	GPTRTVEWL	9	32	529.782940482193	1057.551328031186	2	530.2842407226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GPTRTVEWL_	ENSG00000032444|ENST00000600737|PNPLA6;nc|ENSG00000032444|Q8IY17-2|PNPLA6;nc|ENSG00000032444|Q8IY17-3|PNPLA6;nc|ENSG00000032444|Q8IY17-5|PNPLA6;nc|ENSG00000032444|Q8IY17|PNPLA6;PNPLA6|p.S1175Pfs*10|1|0.55|ENSG00000032444|chr19:7558944-7558944|G/-|frameshift_variant	19.996771675451527	0.6112419832031292	2				NaN	NaN	0	NaN	241	2200	2438
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2449	12.036	NaN	2831.7	30	0	695.9	0.214				-1	LCLAVCLNE	9	32	517.7520399978497	NaN	0	517.752197265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_LCLAVC(Carbamidomethyl (C))LNE_	ENSG00000109158|ENST00000264318|GABRA4	17.364965105453717	0.37820932774828947	2				NaN	NaN	0	NaN	244	2203	2448
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2450	12.04	NaN	4154.1	30	0	844.29	0.106	+			35645	SCNLEDCPDN	10	25	555.1980962367551	1108.38163954031	2	555.199462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SCNLEDCPDN_	ENSG00000154734|ENST00000284984|ADAMTS1;ENST00000464589.1_1_21:28211878-28212356:-|nuORF	9.182911543092327	0.7697862422657429	2				NaN	NaN	0	NaN	245	2203	2448
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2451	12.042	NaN	2932.1	30	0	702.18	0.106				-1	RPCCPGDLPT	10	42	558.2542742040474	1114.4939954748947	2	557.789306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_RPC(Carbamidomethyl (C))CPGDLPT_	TMEM88B|p.G14Efs*23|1|0.31|ENSG00000205116|chr1:1426163-1426163|G/-|frameshift_variant	27.882242232435846	0.6521336255503853	2				NaN	NaN	0	NaN	246	2203	2448
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2452	12.043	NaN	1261.9	30	0	437.21	0.106			+	47989	VSPRGGIIN	9	41	456.7668032769043	911.5190536206086	2	456.76617431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSPRGGIIN_	REV__ENSG00000121440|ENST00000263666|PDZRN3;REV__nc|ENSG00000121440|Q9UPQ7-2|PDZRN3;REV__nc|ENSG00000121440|Q9UPQ7-3|PDZRN3;REV__PDZRN3|p.H870Qfs*17|1|0.5|ENSG00000121440|chr3:73383956-73383956|G/-|frameshift_variant;REV__PDZRN3|p.K1024Rfs*2|1|0.07|ENSG00000121440|chr3:73383495-73383495|T/-|frameshift_variant	30.503639358989545	0.5181749237905803	2				NaN	NaN	0	NaN	247	2203	2448
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2453	12.045	NaN	2583.8	30	0	734.6	0.106			+	-1	KWNMCSFC	8	35	538.2124228038775	1074.410292674555	2	538.2120971679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_KWNMCSFC(Carbamidomethyl (C))_	REV__ENST00000370812.7_2_1:77557956-77558046:-|nuORF	17.364965105453717	0.7956685240855921	2				NaN	NaN	0	NaN	248	2203	2448
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2454	12.047	NaN	3059.7	30	0	500.13	0.038				-1	GCMLVELTYS	10	21	594.7686157226562	NaN	0	594.7686157226562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),Oxidation (M)	_GC(Carbamidomethyl (C))M(Oxidation (M))LVELTYS_	CON__A2I7N1	16.473147378115264	0.4201028297492154	2				NaN	NaN	0	NaN	249	2203	2448
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2462	12.065	NaN	10979	30	0	2345.3	0.214				-1	QVTNAAANCP	10	57	523.2401680035562	1044.4657830739122	2	523.240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_QVTNAAANC(Carbamidomethyl (C))P_	ENSG00000184719|ENST00000331772|RNLS	40.77816245573522	0.5419747034533848	2				NaN	NaN	0	NaN	254	2206	2461
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2463	12.069	NaN	11011	30	0	4416.5	0.106	+			2887	ASASSLKKK	9	65	460.2821767578207	918.5498005824414	2	460.28167724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASASSLKKK_	ENSG00000075618|ENST00000382361|FSCN1	117.81106730687013	0.02252488733980868	2				NaN	NaN	0	NaN	255	2206	2461
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2464	12.071	NaN	5570.1	30	0	2785	0.106				-1	AMGLCVAMIA	10	36	506.2391182126099	1010.4636834920199	2	507.2433776855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Oxidation (M)	_AM(Oxidation (M))GLCVAM(Oxidation (M))IA_	ENSG00000157837|ENST00000353487|SPPL3;ENST00000392495.7_1_12:121202804-121206971:-|nuORF	19.359975847455235	0.718073418909716	2				NaN	NaN	0	NaN	256	2206	2461
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2465	12.073	NaN	6192.9	30	0	2403.3	0.106			+	-1	KGCSPFRNQ	9	47	547.2647493936394	1092.5149458540786	2	547.2647705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_KGC(Carbamidomethyl (C))SPFRNQ_	REV__nc|ENSG00000136811|Q5BJF6-10|ODF2	40.77816245573522	0.41113185337114944	2				NaN	NaN	0	NaN	257	2206	2461
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2466	12.074	NaN	3493.2	30	0	777.2	0.035			+	40467	STVSSSKRK	9	40	490.2796158415198	978.5446787498396	2	490.29217529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STVSSSKRK_	REV__ENSG00000185658|ENST00000342449|BRWD1;REV__nc|ENSG00000185658|Q9NSI6-3|BRWD1;REV__nc|ENSG00000185658|Q9NSI6|BRWD1	37.81151784470057	0.4459294069877048	2				NaN	NaN	0	NaN	258	2206	2461
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2470	12.089	NaN	9691	30	0	2708.2	0.214	+			21765	KQQTIPLK	8	65	478.30033323823756	954.5861135432751	2	478.3001403808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KQQTIPLK_	ENSG00000152240|ENST00000282058|HAUS1;ENST00000439908.1_1_X:18884431-18884560:+|nuORF;nc|ENSG00000152240|Q96CS2-2|HAUS1	84.9155231211612	0.2928622555056503	2				NaN	NaN	0	NaN	259	2209	2469
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2471	12.092	NaN	7958.3	30	0	1354.5	0.106	+			38991	SSSEPVHAKK	10	76	535.2858101926342	1068.5570674520684	2	535.2857666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSSEPVHAKK_	ENSG00000173145|ENST00000371361|NOC3L;NOC3L|p.K235Nfs*2|1|0.43|ENSG00000173145|chr10:94353049-94353049|T/-|frameshift_variant;NOC3L|p.L425Yfs*3|1|0.14|ENSG00000173145|chr10:94346540-94346540|A/-|frameshift_variant;NOC3L|p.T423Hfs*5|1|0.09|ENSG00000173145|chr10:94346547-94346547|T/-|frameshift_variant	99.78786539795823	0.07832680346773438	2				NaN	NaN	0	NaN	260	2209	2469
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2472	12.094	NaN	5886.9	30	0	780.22	0.106			+	-1	GCVDCPYPKE	10	43	584.2460466953047	1166.4775404574093	2	584.2459716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_GC(Carbamidomethyl (C))VDCPYPKE_	REV__ENSG00000114853|ENST00000232974|ZBTB47;REV__ENSG00000198740|ENST00000430262|ZNF652;REV__nc|ENSG00000114853|Q9UFB7-2|ZBTB47	21.9598887501803	0.7004979571547932	2				NaN	NaN	0	NaN	261	2209	2469
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2473	12.096	NaN	5588.2	30	0	1857.7	0.106			+	24491	LGHGRAVRN	9	43	490.2796158415198	978.5446787498396	2	490.2789306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LGHGRAVRN_	REV__ENSG00000215421|ENST00000299687|ZNF407;REV__nc|ENSG00000215421|Q9C0G0-2|ZNF407;REV__nc|ENSG00000215421|Q9C0G0-3|ZNF407;REV__ZNF407|p.G1946Afs*18|1|0.26|ENSG00000215421|chr18:75063553-75063553|G/-|frameshift_variant	17.364965105453717	0.6112419832031293	2				NaN	NaN	0	NaN	262	2209	2469
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2474	12.098	NaN	2656.9	30	0	592.31	0.106			+	-1	IYPDCKKP	8	24	510.76363644733186	1019.5127199614637	2	510.7611389160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_IYPDC(Carbamidomethyl (C))KKP_	REV__INSIG2|p.G15D|1|0.11|ENSG00000125629|chr2:118096600-118096600|G/A|missense_variant	20.481830146152948	0.8005983782650069	2				NaN	NaN	0	NaN	263	2209	2469
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2475	12.099	NaN	3736	30	0	845.93	0.106			+	-1	CDHYDRTR	8	37	561.7418950894804	1121.4692372457607	2	561.7423095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_C(Carbamidomethyl (C))DHYDRTR_	REV__ENSG00000131018|ENST00000367255|SYNE1;REV__ENST00000490135.6_1_6:152637953-152655276:-|nuORF;REV__nc|ENSG00000131018|Q8NF91-4|SYNE1;REV__nc|ENSG00000131018|Q8NF91-7|SYNE1;REV__SYNE1|p.E4738Kfs*25|1|0.12|ENSG00000131018|chr6:152330474-152330474|T/-|frameshift_variant;REV__SYNE1|p.E5862Gfs*83|1|0.12|ENSG00000131018|chr6:152300729-152300738|CCAGACTCCT/-|frameshift_variant;REV__SYNE1|p.G6773Wfs*7|1|0.44|ENSG00000131018|chr6:152236186-152236187|-/A|frameshift_variant;REV__SYNE1|p.K6871Rfs*22|2|0.52|ENSG00000131018|chr6:152233881-152233881|T/-|frameshift_variant;REV__SYNE1|p.L8283Pfs*8|1|0.19|ENSG00000131018|chr6:152148173-152148174|-/G|frameshift_variant;REV__SYNE1|p.M5602Nfs*13|2|0.32|ENSG00000131018|chr6:152310779-152310780|-/T|frameshift_variant;REV__SYNE1|p.N4247H|1|0.39|ENSG00000131018|chr6:152334063-152334063|T/G|missense_variant;REV__SYNE1|p.V8635Sfs*12|1|0.15|ENSG00000131018|chr6:152133375-152133375|T/-|frameshift_variant	18.324413293986947	0.7971860551947066	2				NaN	NaN	0	NaN	264	2209	2469
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2476	12.101	NaN	5801.1	30	0	1629.9	0.036			+	-1	CPEFIHLPC	9	33	558.2542742040474	1114.4939954748947	2	558.2567749023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_C(Carbamidomethyl (C))PEFIHLPC_	REV__ENSG00000175556|ENST00000371628|LONRF3;REV__ENST00000472173.5_1_X:118112321-118146861:+|nuORF;REV__nc|ENSG00000175556|Q496Y0-2|LONRF3;REV__nc|ENSG00000175556|Q496Y0-3|LONRF3	18.324413293986947	0.6112419832031293	2				NaN	NaN	0	NaN	265	2209	2469
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2482	12.118	NaN	9957.9	30	0	4488.7	0.214			+	45893	VAPRACVQGA	10	52	486.2589636773884	970.5033744215768	2	486.2584228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VAPRACVQGA_	REV__nc|ENSG00000160271|Q12967-5|RALGDS	45.9519527083369	0.4943008177357963	2				NaN	NaN	0	NaN	268	2212	2481
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2483	12.121	NaN	10082	30	0	2976.1	0.106	+			7348	DCIFGKRQS	9	52	527.2610212474455	1052.5074895616908	2	527.2608642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DCIFGKRQS_	ENSG00000254093|ENST00000314787|PINX1;ENST00000524061.1_1_8:10645233-10677771:-|nuORF	30.503639358989545	0.5181749237905803	2				NaN	NaN	0	NaN	269	2212	2481
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2484	12.123	NaN	4073.7	30	0	1014.5	0.106	+			38602	SSGLPQQKPQ	10	34	357.19261386503877	1068.5560121953163	3	357.19281005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSGLPQQKPQ_	ENSG00000166833|ENST00000349880|NAV2;NAV2|p.V2057Wfs*16|1|0.23|ENSG00000166833|chr11:20095744-20095744|G/-|frameshift_variant;nc|ENSG00000166833|Q8IVL1-10|NAV2;nc|ENSG00000166833|Q8IVL1-11|NAV2;nc|ENSG00000166833|Q8IVL1-12|NAV2;nc|ENSG00000166833|Q8IVL1-13|NAV2;nc|ENSG00000166833|Q8IVL1-2|NAV2;nc|ENSG00000166833|Q8IVL1-4|NAV2;nc|ENSG00000166833|Q8IVL1-8|NAV2;nc|ENSG00000166833|Q8IVL1-9|NAV2;nc|ENSG00000166833|Q8IVL1|NAV2	30.568863376406313	0.6301935916953115	2				NaN	NaN	0	NaN	270	2212	2481
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2485	12.125	NaN	2882.3	30	0	806.32	0.106			+	49448	VVVPKAGK	8	40	399.26595240247644	796.5173518717529	2	399.26580810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVVPKAGK_	REV__ENSG00000164190|ENST00000282516|NIPBL;REV__ENST00000504430.5_1_5:36961623-36995905:+|nuORF;REV__nc|ENSG00000164190|Q6KC79-2|NIPBL;REV__nc|ENSG00000164190|Q6KC79-3|NIPBL;REV__NIPBL|p.F1423Lfs*15|1|0.43|ENSG00000164190|chr5:37008032-37008032|T/-|frameshift_variant;REV__NIPBL|p.I2776Lfs*3|1|0.17|ENSG00000164190|chr5:37064797-37064797|A/-|frameshift_variant;REV__NIPBL|p.L2220Ffs*3|1|0.21|ENSG00000164190|chr5:37048567-37048568|-/T|frameshift_variant	33.51558372728122	0.7005509609380386	2				NaN	NaN	0	NaN	271	2212	2481
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2486	12.127	NaN	2039.2	30	0	713.51	0.106				-1	ETGVLKNGM	9	19	482.7430352890852	NaN	0	482.7429504394531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_ETGVLKNGM(Oxidation (M))_	ENST00000547505.2_1_12:44054314-44054545:+|nuORF	16.473147378115264	0.38122769658151995	2				NaN	NaN	0	NaN	272	2212	2481
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2487	12.129	NaN	5715.3	30	0	1019.3	0.106	+			19976	KEHHHQSSVN	10	61	601.7877927289259	NaN	0	601.7877807617188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KEHHHQSSVN_	ENSG00000182022|ENST00000435907|CHST15;nc|ENSG00000182022|Q7LFX5-2|CHST15	62.107414245175825	0.217068727747531	2				NaN	NaN	0	NaN	273	2212	2481
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2488	12.13	NaN	5277.8	30	0	924.68	0.036			+	-1	QVKHCLCY	8	49	554.2590615088366	NaN	0	554.2584228515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C)	_QVKHC(Carbamidomethyl (C))LC(Carbamidomethyl (C))Y_	REV__CHML|p.R403C|1|0.22|ENSG00000203668|chr1:241634560-241634560|G/A|missense_variant	28.2542754592877	1.7418937515398478	2				NaN	NaN	0	NaN	274	2212	2481
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2498	12.154	NaN	29144	30	0	5063.9	0.214	+			4961	ATQTRTVNK	9	87	509.78584250811815	1017.5571320830363	2	509.78594970703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATQTRTVNK_	ENSG00000174231|ENST00000304992|PRPF8;ENST00000575116.1_1_17:1555319-1557183:-|nuORF;ENST00000576585.1_1_17:1556769-1557303:-|nuORF	114.8945686534367	0.024290463251177924	2				NaN	NaN	0	NaN	281	2215	2497
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2499	12.158	NaN	2129.7	30	0	256.55	0.106	+			3531	ASSRHGIQK	9	41	328.51736597983705	982.5302685397112	3	328.517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASSRHGIQK_	ENSG00000135899|ENST00000258381|SP110;ENST00000490880.5_1_2:231065532-231076254:-|nuORF;nc|ENSG00000135899|Q9HB58-2|SP110;nc|ENSG00000135899|Q9HB58-3|SP110;nc|ENSG00000135899|Q9HB58-7|SP110;nc|ENSG00000135899|Q9HB58|SP110	54.776311868738084	0.25715957988447635	2				NaN	NaN	0	NaN	282	2215	2497
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2500	12.159	NaN	7747.8	30	0	3178.8	0.106			+	8959	EFDLAESDQ	9	50	527.2215841100011	1052.4286152868021	2	527.2225952148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EFDLAESDQ_	REV__ENSG00000149016|ENST00000476907|TUT1;REV__TUT1|p.A338Qfs*59|1|0.33|ENSG00000149016|chr11:62578709-62578709|C/-|frameshift_variant;REV__TUT1|p.F545Lfs*3|1|0.28|ENSG00000149016|chr11:62576084-62576084|A/-|frameshift_variant	34.172542307311794	0.4838870758800184	2				NaN	NaN	0	NaN	283	2215	2497
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2501	12.161	NaN	2785.6	30	0	831.08	0.106	+			3500	ASSKDAIKK	9	48	474.2797192277627	946.5448855223254	2	474.2796325683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASSKDAIKK_	DSTN|p.Y117H|1|0.26|ENSG00000125868|chr20:17604592-17604592|T/C|missense_variant;ENSG00000125868|ENST00000246069|DSTN;ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000400899.2_1_1:11051144-11051557:-|nuORF;ENST00000530945.1_1_11:65623104-65623215:-|nuORF;nc|ENSG00000125868|P60981-2|DSTN;nc|ENSG00000165410|Q9Y281-3|CFL2	88.17693792209575	0.07000514020414955	2				NaN	NaN	0	NaN	284	2215	2497
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2502	12.163	NaN	10161	30	0	1725.2	0.106			+	-1	GMIECKHEQ	9	56	558.7456743481571	1115.476795763114	2	558.74755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))GMIECKHEQ_	REV__ENST00000397620.6_1_15:37184187-37184223:-|nuORF	26.69291269510374	0.5537881896960711	2				NaN	NaN	0	NaN	285	2215	2497
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2503	12.165	NaN	7529.6	30	0	1255.8	0.106			+	9258	EGVSESTFMF	10	47	567.2445360835135	1132.4745192338269	2	567.2440185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EGVSESTFMF_	REV__ENSG00000151224|ENST00000372213|MAT1A	21.9598887501803	0.7004979571547932	2				NaN	NaN	0	NaN	286	2215	2497
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2504	12.167	NaN	3280	30	0	707.41	0.035	+			9260	EGWFRIAE	8	37	504.2514992700395	NaN	0	504.2514953613281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EGWFRIAE_	ENSG00000106692|ENST00000357998|FKTN;FKTN|p.F369Sfs*37|2|0.32|ENSG00000106692|chr9:105619989-105619989|T/-|frameshift_variant;nc|ENSG00000106692|O75072-2|FKTN	23.04248740728303	1.7418937515398478	2				NaN	NaN	0	NaN	287	2215	2497
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2513	12.188	NaN	7602.7	30	0	1860.3	0.214			+	31990	QRFGRGCE	8	35	476.72491273858276	951.4352725439655	2	476.7246398925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QRFGRGCE_	REV__ENSG00000175787|ENST00000395395|ZNF169;REV__ENSG00000181666|ENST00000392153|ZNF875;REV__ENST00000340911.8_1_9:97062029-97063649:+|nuORF;REV__nc|ENSG00000181666|P10072|ZNF875	33.51558372728122	0.7005509609380386	2				NaN	NaN	0	NaN	293	2218	2512
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2514	12.192	NaN	19898	30	0	5095.1	0.106	+			3411	ASQKALKEK	9	69	501.80052862543334	1001.5865043176667	2	501.800537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASQKALKEK_	ENSG00000131143|ENST00000253452|COX4I1;ENST00000567266.5_1_16:85833348-85838718:+|nuORF;ENST00000569997.1_1_16:85838427-85838718:+|nuORF	120.27252224102466	0.02103478360410217	2				NaN	NaN	0	NaN	294	2218	2512
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2515	12.194	NaN	12215	30	0	2621.8	0.106				-1	ERPLRVPC	8	61	513.7800244999128	NaN	0	513.7066040039062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_ERPLRVPC(Carbamidomethyl (C))_	ENST00000275364.7_1_7:2770728-2770962:-|nuORF	50.0245360154114	1.7418937515398478	2				NaN	NaN	0	NaN	295	2218	2512
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2516	12.196	NaN	6513.9	30	0	966.22	0.106	+			13329	GKMKWKNKG	9	53	538.8076710193081	NaN	0	538.8076782226562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GKMKWKNKG_	ENST00000260526.10_1_1:94668505-94668663:-|nuORF	63.30626980617807	0.13521764763214936	2				NaN	NaN	0	NaN	296	2218	2512
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2517	12.197	NaN	4559.9	30	0	1138.3	0.106				-1	HAACPLLMC	9	42	536.7424230911997	1071.4702932491994	2	536.7418823242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C)	_HAAC(Carbamidomethyl (C))PLLMC(Carbamidomethyl (C))_	ENST00000273814.7_1_4:953005-953860:-|nuORF	21.70233525837049	0.6004277881119521	2				NaN	NaN	0	NaN	297	2218	2512
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2518	12.199	NaN	15333	30	0	4645.6	0.106	+			2843	ASAKKKNKK	9	74	334.8855728900081	NaN	0	334.88531494140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASAKKKNKK_	ENSG00000063046|ENST00000262056|EIF4B;nc|ENSG00000063046|P23588-2|EIF4B	51.33545320467046	0.19748963086191895	2				NaN	NaN	0	NaN	298	2218	2512
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2519	12.201	NaN	3629	30	0	813.46	0.038				-1	PQMNESAFMQ	10	33	607.7455444335938	NaN	0	607.7455444335938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Oxidation (M)	_PQM(Oxidation (M))NESAFM(Oxidation (M))Q_	ENSG00000048707|ENST00000620676|VPS13D;nc|ENSG00000048707|Q5THJ4-2|VPS13D;VPS13D|p.K3964Nfs*34|1|0.09|ENSG00000048707|chr1:12403831-12403831|A/-|frameshift_variant	14.864876125193954	0.4201028297492154	2				NaN	NaN	0	NaN	299	2218	2512
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2526	12.219	NaN	16921	30	0	4471.2	0.214	+			3412	ASQKALKEK	9	76	334.8694022725577	1001.5863774178731	3	334.8695068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASQKALKEK_	ENSG00000131143|ENST00000253452|COX4I1;ENST00000567266.5_1_16:85833348-85838718:+|nuORF;ENST00000569997.1_1_16:85838427-85838718:+|nuORF	63.53385203322761	0.18415635464017938	2				NaN	NaN	0	NaN	303	2221	2525
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2527	12.223	NaN	10175	30	0	4206.6	0.106	+			9493	EKTEILFF	8	53	513.7800244999128	NaN	0	513.7798461914062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EKTEILFF_	ENSG00000253598|ENST00000518568|SLC10A5;SLC10A5|p.A299Qfs*4|1|0.24|ENSG00000253598|chr8:81694079-81694079|T/-|frameshift_variant;SLC10A5|p.M211Ifs*49|1|0.1|ENSG00000253598|chr8:81694340-81694341|-/A|frameshift_variant	57.81127852772723	1.7418937515398478	2				NaN	NaN	0	NaN	304	2221	2525
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2528	12.225	NaN	5770.9	30	0	1249.5	0.106	+			4605	ATLKTKSQTK	10	64	553.3321784263107	1104.6498039194214	2	553.3327026367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATLKTKSQTK_	ENSG00000168918|ENST00000445964|INPP5D;INPP5D|p.E850Rfs*19|1|0.36|ENSG00000168918|chr2:233193909-233193909|G/-|frameshift_variant;nc|ENSG00000168918|Q92835-2|INPP5D;nc|ENSG00000168918|Q92835-3|INPP5D	61.76455937419982	0.3497917639301274	2				NaN	NaN	0	NaN	305	2221	2525
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2529	12.227	NaN	6214.5	30	0	1184.7	0.106	+			11586	FPPTHPGAGW	10	45	533.7593171352854	1065.5040813373707	2	533.7595825195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FPPTHPGAGW_	ENST00000373314.7_1_9:130268517-130268865:-|nuORF	23.04248740728303	0.69165701907106	2				NaN	NaN	0	NaN	306	2221	2525
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2530	12.228	NaN	2791	30	0	493.42	0.106	+			33333	RGTKTVQEKEN	11	43	645.3439331054688	NaN	0	645.3439331054688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RGTKTVQEKEN_	ENSG00000161016|ENST00000528957|RPL8;ENST00000529920.5_1_8:146015191-146016147:-|nuORF	23.37791116691581	0.456735970842152	2				NaN	NaN	0	NaN	307	2221	2525
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2531	12.23	NaN	1032.2	30	0	293.84	0.106				-1	 	0	22	348.1888505608799	1041.5447222828398	3	349.22918701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	308	2221	2525
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2532	12.232	NaN	2732.9	30	0	542.79	0.037			+	-1	PVCTHNNSLD	10	27	578.7545166015625	NaN	0	578.7545166015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_PVC(Carbamidomethyl (C))THNNSLD_	REV__ENSG00000184956|ENST00000421673|MUC6;REV__MUC6|p.E825Rfs*6|1|0.47|ENSG00000184956|chr11:1026400-1026401|-/G|frameshift_variant;REV__MUC6|p.E825Rfs*87|1|0.38|ENSG00000184956|chr11:1026401-1026401|G/-|frameshift_variant;REV__MUC6|p.N1717Tfs*10|1|0.03|ENSG00000184956|chr11:1017653-1017653|G/-|frameshift_variant;REV__MUC6|p.P1246Lfs*47|1|0.2|ENSG00000184956|chr11:1020161-1020161|G/-|frameshift_variant;REV__MUC6|p.Q524Sfs*57|1|0.11|ENSG00000184956|chr11:1028667-1028667|G/-|frameshift_variant	14.864876125193954	0.4201028297492154	2				NaN	NaN	0	NaN	309	2221	2525
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2537	12.247	NaN	19190	30	0	6239.5	0.214			+	37201	SKEGHHLQ	8	67	468.2382669574403	934.4619809816807	2	468.23797607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SKEGHHLQ_	REV__ENSG00000124157|ENST00000372769|SEMG2;REV__SEMG2|p.E320Dfs*17|1|0.04|ENSG00000124157|chr20:45222591-45222592|-/CGGGTAT|frameshift_variant	143.8867514904718	0.2724165679903577	2				NaN	NaN	0	NaN	311	2224	2536
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2538	12.25	NaN	13271	30	0	3804.8	0.106	+			40117	STPKSSNPPK	10	58	521.7801972023981	1041.545841471596	2	521.7802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STPKSSNPPK_	ENSG00000118322|ENST00000327245|ATP10B	63.53385203322761	0.33370026130094593	2				NaN	NaN	0	NaN	312	2224	2536
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2539	12.252	NaN	9784.2	30	0	5928.8	0.106			+	32853	RCTCFCVK	8	49	480.21715594218944	958.4197589511789	2	480.21710205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RCTCFCVK_	REV__ENST00000508394.6_1_12:54575540-54575678:-|nuORF	37.15910966729921	0.6739408393984688	2				NaN	NaN	0	NaN	313	2224	2536
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2540	12.254	NaN	11223	30	0	1793.6	0.106	+			44909	TVAETSKEK	9	65	496.76645615422075	991.5183593752415	2	496.7663879394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TVAETSKEK_	ENSG00000160294|ENST00000291688|MCM3AP	90.60085204095205	0.06317133949006545	2				NaN	NaN	0	NaN	314	2224	2536
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2541	12.256	NaN	7900.8	30	0	2067.3	0.106	+			46639	VGCHHHDDGG	10	60	517.1988107311416	1032.3830685290832	2	517.19873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VGCHHHDDGG_	KCNG1|p.L244Tfs*274|1|0.11|ENSG00000026559|chr20:51009609-51009610|-/CACCTTTCAAAATGTCAGCCGCTGACAGGAATGGTTGTTTTCCTATATGCAATGT|frameshift_variant	21.9598887501803	0.7004979571547932	2				NaN	NaN	0	NaN	315	2224	2536
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2542	12.258	NaN	1436.2	30	0	330.63	0.106	+			38761	SSLSGAHRK	9	44	471.75942091899617	941.5042889047924	2	471.7588806152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSLSGAHRK_	DHX37|p.R153H|1|0.18|ENSG00000150990|chr12:124980770-124980770|C/T|missense_variant;ENSG00000150990|ENST00000308736|DHX37	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	316	2224	2536
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2543	12.259	NaN	1821.7	30	0	276.95	0.04			+	21984	KSERDLVKLTR	11	34	672.9013671875	NaN	0	672.9013671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KSERDLVKLTR_	REV__DSC1|p.N542Kfs*28|1|0.32|ENSG00000134765|chr18:31139785-31139786|-/T|frameshift_variant;REV__ENSG00000134765|ENST00000257198|DSC1;REV__nc|ENSG00000134765|Q08554-2|DSC1	11.635926663890343	0.456735970842152	2				NaN	NaN	0	NaN	317	2224	2536
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2549	12.276	NaN	11300	30	0	1780.5	0.214	+			13516	GLPTQEANGQP	11	69	556.274330791209	1110.5341086492178	2	556.2749633789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GLPTQEANGQP_	ENSG00000164620|ENST00000297164|RELL2	60.1669710687717	0.32196467475348695	2				NaN	NaN	0	NaN	320	2227	2548
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2550	12.279	NaN	3086.5	30	0	246.8	0.106	+			58	AAAQVAHQK	9	58	462.2567135909627	922.4988742487254	2	462.25640869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAAQVAHQK_	ENSG00000112977|ENST00000230895|DAP	129.68262048586715	0.015338143639892752	2				NaN	NaN	0	NaN	321	2227	2548
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2551	12.281	NaN	1807.8	30	0	270.76	0.106			+	416	AATDLIHNAV	10	44	342.18532545947284	1023.5341469786185	3	342.185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AATDLIHNAV_	REV__ENSG00000153294|ENST00000283303|ADGRF4	47.95952297671804	0.47580206326914537	2				NaN	NaN	0	NaN	322	2227	2548
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2552	12.283	NaN	4153.1	30	0	1639.5	0.106				-1	 	0	33	348.1888505608799	1041.5447222828398	3	348.1888427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	323	2227	2548
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2553	12.285	NaN	3815.1	30	0	962.3	0.106			+	22975	KVRHQCKK	8	39	513.8037068593227	1025.5928607854453	2	513.803955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KVRHQCKK_	REV__PHRF1|p.R371C|1|0.15|ENSG00000070047|chr11:601660-601660|C/T|missense_variant	26.79610172149135	0.7524337208463756	2				NaN	NaN	0	NaN	324	2227	2548
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2554	12.287	NaN	2867.4	30	0	1115.6	0.106			+	10301	ETPVGWPQA	9	43	492.74361797022124	NaN	0	492.7434387207031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ETPVGWPQA_	REV__FSTL4|p.G790Vfs*6|1|0.38|ENSG00000053108|chr5:133199255-133199255|C/-|frameshift_variant	37.15910966729921	0.2899585034171616	2				NaN	NaN	0	NaN	325	2227	2548
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2555	12.288	NaN	1222	30	0	234.79	0.033	+			29829	PKSSNPPK	8	38	427.7401740582247	853.4657951832494	2	427.73992919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PKSSNPPK_	ENSG00000118322|ENST00000327245|ATP10B	67.49366992349736	0.4277823096851425	2				NaN	NaN	0	NaN	326	2227	2548
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2560	12.303	NaN	4208.3	30	0	1177.1	0.214	+			14166	GSNPEVQKK	9	58	493.76765400673895	985.5207550802779	2	493.7664794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSNPEVQKK_	CYP4V2|p.K471Sfs*4|1|0.3|ENSG00000145476|chr4:186210472-186210472|A/-|frameshift_variant;ENSG00000145476|ENST00000378802|CYP4V2;ENST00000502665.1_1_4:187126176-187131792:+|nuORF;nc|ENSG00000145476|Q6ZWL3-2|CYP4V2	80.45461616416974	0.09558281504443908	2				NaN	NaN	0	NaN	328	2230	2559
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2561	12.306	NaN	3919.4	30	0	1351.7	0.106	+			19297	KAGAEVVKQ	9	55	465.27439471245737	928.5342364917148	2	465.27374267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KAGAEVVKQ_	ENSG00000134684|ENST00000373477|YARS1;ENST00000470377.1_1_1:33256708-33272178:-|nuORF;ENST00000481895.5_1_1:33256818-33282875:-|nuORF	90.60085204095205	0.06317133949006545	2				NaN	NaN	0	NaN	329	2230	2559
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2562	12.308	NaN	2679.3	30	0	997.4	0.106			+	-1	EEFSMKTI	8	35	500.73580931491995	999.4570656966399	2	500.7354736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_EEFSM(Oxidation (M))KTI_	REV__ENSG00000121446|ENST00000294854|RGSL1;REV__nc|ENSG00000121446|A5PLK6-2|RGSL1;REV__nc|ENSG00000121446|A5PLK6-5|RGSL1	18.324413293986947	0.7971860551947066	2				NaN	NaN	0	NaN	330	2230	2559
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2563	12.31	NaN	4289.9	30	0	513.72	0.106	+			11722	FSCPESGCVFS	11	26	581.7305898129372	1161.4466266926743	2	581.7297973632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FSCPESGCVFS_	ENSG00000115568|ENST00000411696|ZNF142;ZNF142|p.A873Lfs*14|1|0.2|ENSG00000115568|chr2:218643899-218643899|C/-|frameshift_variant;ZNF142|p.G1052Dfs*20|3|0.38|ENSG00000115568|chr2:218643361-218643361|C/-|frameshift_variant;ZNF142|p.G1126Afs*25|1|0.14|ENSG00000115568|chr2:218643139-218643139|C/-|frameshift_variant	14.137123925751023	0.8042936413770803	2				NaN	NaN	0	NaN	331	2230	2559
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2564	12.312	NaN	2133.9	30	0	543.7	0.106	+			13268	GISYLFLPQ	9	37	519.2868416862036	1036.5591304392071	2	519.286376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GISYLFLPQ_	ENST00000379158.6_1_9:34329546-34338807:+|nuORF	37.15910966729921	0.4535818937225704	2				NaN	NaN	0	NaN	332	2230	2559
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2565	12.314	NaN	2877	30	0	1243.8	0.106			+	-1	MLASCLAMV	9	31	506.2391182126099	1010.4636834920199	2	506.7404479980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),Oxidation (M)	_MLASC(Carbamidomethyl (C))LAM(Oxidation (M))V_	REV__ENST00000267068.5_2_13:33096368-33101649:-|nuORF;REV__ENST00000512755.1_1_13:33101514-33101649:-|nuORF;REV__nc|ENSG00000244754|Q92802-3|N4BP2L2	20.481830146152948	0.6112419832031293	2				NaN	NaN	0	NaN	333	2230	2559
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2566	12.315	NaN	3762.9	30	0	503.51	0.037				-1	YQEQCRQE	8	29	570.7405166924407	1139.4664804516813	2	570.739990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_YQEQC(Carbamidomethyl (C))RQE_	CYP4F11|p.E349K|1|0.12|ENSG00000171903|chr19:15922107-15922107|C/T|missense_variant;ENSG00000171903|ENST00000402119|CYP4F11	15.641811463095205	0.7929430624199021	2				NaN	NaN	0	NaN	334	2230	2559
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2571	12.33	NaN	10200	30	0	2316.9	0.214	+			31209	QGRSCPEPAT	10	60	523.2401680035562	1044.4657830739122	2	523.2404174804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QGRSCPEPAT_	ENST00000444782.5_1_5:141017057-141017809:+|nuORF;ENST00000520674.5_1_5:141017057-141017459:+|nuORF;ENST00000521367.5_1_5:141017057-141018376:+|nuORF	30.317721548370564	0.6322445173429027	2				NaN	NaN	0	NaN	336	2233	2570
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2572	12.334	NaN	4593.1	30	0	1063.6	0.106				-1	EMVMIMGGK	9	43	514.2347693057174	1026.4549856782346	2	514.23486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Oxidation (M)	_EM(Oxidation (M))VM(Oxidation (M))IMGGK_	ENSG00000241973|ENST00000255882|PI4KA;ENST00000360806.9_2_22:21827645-21842641:-|nuORF;ENST00000492581.5_1_22:21064985-21065135:-|nuORF;nc|ENSG00000183506|A4QPH2-4|PI4KAP2;nc|ENSG00000183506|A4QPH2|PI4KAP2;nc|ENSG00000241973|P42356-2|PI4KA	24.20275056022122	0.577060078256802	2				NaN	NaN	0	NaN	337	2233	2570
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2573	12.336	NaN	5002.3	30	0	798.53	0.106	+			20958	KKEAITYRE	9	53	569.3150671586855	1136.6155813841708	2	569.3157958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KKEAITYRE_	ENSG00000168779|ENST00000483851|SHOX2;nc|ENSG00000168779|O60902-3|SHOX2;nc|ENSG00000168779|O60902|SHOX2	58.2462437865262	0.22823408064396822	2				NaN	NaN	0	NaN	338	2233	2570
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2574	12.337	NaN	5255.3	30	0	1053.9	0.106			+	-1	MMGLNVCSPQ	10	31	548.2363837341354	1094.4582145350707	2	548.2360229492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_M(Oxidation (M))MGLNVCSPQ_	REV__ENSG00000164509|ENST00000652347|IL31RA;REV__ENST00000490985.5_1_5:55149389-55162476:+|nuORF;REV__IL31RA|p.L117Pfs*9|1|0.3|ENSG00000164509|chr5:55872338-55872339|-/T|frameshift_variant;REV__nc|ENSG00000164509|Q8NI17-10|IL31RA;REV__nc|ENSG00000164509|Q8NI17-11|IL31RA;REV__nc|ENSG00000164509|Q8NI17-12|IL31RA;REV__nc|ENSG00000164509|Q8NI17-3|IL31RA;REV__nc|ENSG00000164509|Q8NI17-4|IL31RA;REV__nc|ENSG00000164509|Q8NI17-5|IL31RA;REV__nc|ENSG00000164509|Q8NI17-7|IL31RA;REV__nc|ENSG00000164509|Q8NI17-8|IL31RA;REV__nc|ENSG00000164509|Q8NI17-9|IL31RA	16.006774744331256	0.7351120747673535	2				NaN	NaN	0	NaN	339	2233	2570
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2575	12.339	NaN	6520.5	30	0	1348.8	0.106	+			50078	WGEGEVDDEE	10	44	582.7195488371312	1163.4245447410624	2	582.7201538085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_WGEGEVDDEE_	ARL6IP6|p.E44D|1|0.18|ENSG00000177917|chr2:152718756-152718756|G/C|missense_variant	15.641811463095205	0.7369665665077569	2				NaN	NaN	0	NaN	340	2233	2570
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2576	12.341	NaN	6481.4	30	0	1782.3	0.106	+			14644	GTHASEHAVNK	11	58	575.7840761297153	1149.5535993262306	2	575.7844848632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTHASEHAVNK_	ENSG00000166595|ENST00000422424|CIAO2B;ENST00000562362.5_1_16:66966108-66968009:-|nuORF	68.84614121027924	0.24535906747804975	2				NaN	NaN	0	NaN	341	2233	2570
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2577	12.343	NaN	4384.8	30	0	810.49	0.036				-1	MTVMKCRGP	9	47	540.7539870731779	1079.4934212131557	2	541.2552490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))M(Oxidation (M))TVMKCRGP_	ENST00000475441.5_1_1:28905087-28907099:-|nuORF	35.61828744233558	0.47037581924408073	2				NaN	NaN	0	NaN	342	2233	2570
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2582	12.358	NaN	23078	30	0	5919.6	0.214	+			42224	TAAKSITKK	9	80	474.2977016496756	946.5808503661513	2	474.29754638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAAKSITKK_	ENSG00000133574|ENST00000255945|GIMAP4	131.115847015877	0.014647977962315902	2				NaN	NaN	0	NaN	344	2236	2581
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2583	12.361	NaN	20515	30	0	3390.8	0.106	+			34977	SAAPPQEKK	9	78	478.26384209032653	954.5131312474531	2	478.2637939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAAPPQEKK_	CAST|p.E474Kfs*10|1|0.39|ENSG00000153113|chr5:96754695-96754695|A/-|frameshift_variant;ENSG00000153113|ENST00000675179|CAST;ENST00000513666.5_1_5:96073558-96090478:+|nuORF;nc|ENSG00000153113|P20810-10|CAST;nc|ENSG00000153113|P20810-2|CAST;nc|ENSG00000153113|P20810-3|CAST;nc|ENSG00000153113|P20810-4|CAST;nc|ENSG00000153113|P20810-5|CAST;nc|ENSG00000153113|P20810-7|CAST;nc|ENSG00000153113|P20810-8|CAST;nc|ENSG00000153113|P20810-9|CAST;nc|ENSG00000153113|P20810|CAST	91.26522074875469	0.06129826844580791	2				NaN	NaN	0	NaN	345	2236	2581
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2584	12.363	NaN	17523	30	0	2181.6	0.106	+			4104	ATDSNKYRAK	10	77	577.3017881322635	1152.5890233313269	2	577.3018798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATDSNKYRAK_	ENSG00000214706|ENST00000417626|IFRD2;ENST00000464258.5_1_3:50325776-50327005:-|nuORF	120.30596017624542	0.026897611020491978	2				NaN	NaN	0	NaN	346	2236	2581
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2585	12.365	NaN	9150.3	30	0	2913	0.106				-1	 	0	55	490.24320245243666	978.4718519716733	2	490.2427673339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	347	2236	2581
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2586	12.367	NaN	6281.5	30	0	956.54	0.106			+	-1	LSATISSVIQ	10	54	530.7966331803342	1059.5787134274683	2	530.796630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LSATISSVIQ_	REV__ENSG00000075886|ENST00000321253|TUBA3D;REV__ENSG00000123416|ENST00000336023|TUBA1B;REV__ENSG00000127824|ENST00000248437|TUBA4A;REV__ENSG00000152086|ENST00000312988|TUBA3E;REV__ENSG00000167552|ENST00000301071|TUBA1A;REV__ENSG00000167553|ENST00000301072|TUBA1C;REV__ENSG00000183785|ENST00000330423|TUBA8;REV__ENSG00000198033|ENST00000400113|TUBA3C;REV__ENSG00000243910|ENST00000490341|TUBA4B;REV__ENST00000442739.1_1_22:21363397-21363730:-|nuORF;REV__ENST00000530835.1_1_11:90015825-90016947:+|nuORF;REV__nc|ENSG00000123416|P68363-2|TUBA1B;REV__nc|ENSG00000127824|P68366-2|TUBA4A;REV__nc|ENSG00000167552|Q71U36-2|TUBA1A;REV__nc|ENSG00000183785|Q9NY65-2|TUBA8;REV__nc|ENSG00000198033|P0DPH7-2|TUBA3C;REV__TUBA3C|p.R243Q|2|0.21|ENSG00000198033|chr13:19177255-19177255|C/T|missense_variant;REV__TUBA3C|p.T361Rfs*18|1|0.17|ENSG00000198033|chr13:19174136-19174136|G/-|frameshift_variant;REV__TUBA3D|p.G366Efs*13|1|0.17|ENSG00000075886|chr2:131482588-131482588|G/-|frameshift_variant;REV__TUBA3D|p.R243Q|1|0.3|ENSG00000075886|chr2:131480421-131480421|G/A|missense_variant;REV__TUBA3D|p.V328Pfs*54|1|0.45|ENSG00000075886|chr2:131480665-131480666|-/CCCAAAGA|frameshift_variant	32.75053402867276	0.6123771875927935	2				NaN	NaN	0	NaN	348	2236	2581
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2587	12.368	NaN	11109	30	0	1720.3	0.106				-1	RQCSDVDDI	9	47	554.2407097240923	1106.4668665149845	2	554.2403564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_RQC(Carbamidomethyl (C))SDVDDI_	ENSG00000189050|ENST00000305783|RNFT1;ENST00000486103.6_1_17:58031378-58035783:-|nuORF	29.14955571784316	0.5308295550522326	2				NaN	NaN	0	NaN	349	2236	2581
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2588	12.37	NaN	4088.9	30	0	1447.6	0.034	+			23069	KVTSVQKK	8	53	459.292156396482	NaN	0	459.2921447753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KVTSVQKK_	ENST00000502083.2_1_8:22865326-22865587:-|nuORF	74.25504064058377	1.7418937515398478	2				NaN	NaN	0	NaN	350	2236	2581
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2596	12.388	NaN	11570	30	0	3164.7	0.214				-1	 	0	64	346.5655623009741	1036.6748575031222	3	346.5657958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	355	2239	2595
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2597	12.392	NaN	13525	30	0	2516.8	0.106			+	27365	MKAAHAAKK	9	55	486.2769670227749	970.5393811123498	2	486.27679443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_M(Oxidation (M))KAAHAAKK_	REV__PIP4K2B|p.T386M|1|0.22|ENSG00000276293|chr17:38770449-38770449|G/A|missense_variant	63.30626980617807	0.18605348971131092	2				NaN	NaN	0	NaN	356	2239	2595
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2598	12.394	NaN	8322.7	30	0	1430.4	0.106			+	-1	RCRMSCFF	8	42	553.7379015389195	NaN	0	553.7379150390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_RCRMSC(Carbamidomethyl (C))FF_	REV__ENSG00000186645|ENST00000671986|SPDYE17;REV__ENSG00000214300|ENST00000332397|SPDYE3;REV__ENSG00000262461|ENST00000575125|SPDYE9;REV__ENSG00000273520|ENST00000333385|SPDYE8;REV__nc|ENSG00000184616|P0DUX1|SPDYE12;REV__nc|ENSG00000214300|A6NKU9-2|SPDYE3;REV__nc|ENSG00000286014|P0DUD4|SPDYE15	24.20275056022122	1.7418937515398478	2				NaN	NaN	0	NaN	357	2239	2595
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2599	12.396	NaN	13700	30	0	2443.5	0.106				-1	TAMYATMQR	9	59	544.7482498293037	1087.4819467254074	2	544.748779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_TAMYATM(Oxidation (M))QR_	ENSG00000115705|ENST00000329066|TPO;nc|ENSG00000115705|P07202-2|TPO;nc|ENSG00000115705|P07202-3|TPO;nc|ENSG00000115705|P07202-4|TPO;nc|ENSG00000115705|P07202-5|TPO;nc|ENSG00000115705|P07202-6|TPO;nc|ENSG00000115705|P07202-7|TPO;nc|ENSG00000115705|P07202-8|TPO;TPO|p.I241Tfs*18|1|0.13|ENSG00000115705|chr2:1456184-1456185|-/C|frameshift_variant	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	358	2239	2595
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2600	12.398	NaN	6469.6	30	0	1472.9	0.106			+	10974	FECCMLKK	8	54	501.2347331972942	1000.4549134613884	2	501.2336120605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FECCMLKK_	REV__ENSG00000183621|ENST00000436087|ZNF438;REV__nc|ENSG00000183621|Q7Z4V0-2|ZNF438;REV__nc|ENSG00000183621|Q7Z4V0-3|ZNF438	30.503639358989545	0.7238069182250283	2				NaN	NaN	0	NaN	359	2239	2595
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2601	12.399	NaN	4066.2	30	0	839.4	0.106	+			42040	SWKDMEPQ	8	46	510.72525676218896	1019.435960591178	2	510.7251281738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SWKDMEPQ_	ENSG00000054654|ENST00000555002|SYNE2;ENST00000394768.6_2_14:64542710-64692241:+|nuORF;nc|ENSG00000054654|Q8WXH0-7|SYNE2;nc|ENSG00000054654|Q8WXH0|SYNE2;SYNE2|p.S6651Rfs*83|1|0.29|ENSG00000054654|chr14:64220596-64220597|-/G|frameshift_variant	35.61828744233558	0.6843154725607303	2				NaN	NaN	0	NaN	360	2239	2595
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2602	12.401	NaN	6172.6	30	0	1916.1	0.037				-1	QELGCCFYE	9	31	574.7221834154885	1147.429813897777	2	574.7220458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_QELGC(Carbamidomethyl (C))CFYE_	ENSG00000153495|ENST00000283547|TEX29;TEX29|p.K53Nfs*83|1|0.1|ENSG00000153495|chr13:111328281-111328282|-/ACCTGGG|frameshift_variant	21.9598887501803	0.5980208138527809	2				NaN	NaN	0	NaN	361	2239	2595
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2607	12.416	NaN	14359	30	0	2514.7	0.214	+			39669	STIGETSKKK	10	72	539.8089815037865	1077.603410074373	2	539.8090209960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STIGETSKKK_	ENSG00000100461|ENST00000359890|RBM23;ENST00000554955.5_1_14:23375339-23380602:-|nuORF;ENST00000557667.5_1_14:23373372-23380602:-|nuORF;nc|ENSG00000100461|Q86U06-3|RBM23	99.78786539795823	0.07832680346773438	2				NaN	NaN	0	NaN	363	2242	2606
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2608	12.419	NaN	2877.6	30	0	948.1	0.106			+	44427	TSLSSLNKTK	10	28	360.2080578842959	1077.6023442530877	3	360.208251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TSLSSLNKTK_	REV__PCDH7|p.D918Ifs*209|1|0.36|ENSG00000169851|chr4:30724168-30724168|A/-|frameshift_variant	16.006774744331256	0.7351120747673535	2				NaN	NaN	0	NaN	364	2242	2606
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2609	12.421	NaN	6698	30	0	1293.6	0.106			+	9492	EKSRWNPVS	9	40	551.788103913803	1101.5616548944058	2	551.78857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EKSRWNPVS_	REV__ENST00000359901.8_1_2:98128184-98128274:-|nuORF	42.396135135203025	0.392153681582562	2				NaN	NaN	0	NaN	365	2242	2606
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2610	12.423	NaN	6067.9	30	0	1156	0.106				-1	EHLCASEFAL	10	61	588.7691739621088	NaN	0	588.7692260742188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_EHLC(Carbamidomethyl (C))ASEFAL_	ENSG00000104332|ENST00000220772|SFRP1	34.172542307311794	0.38797011891751465	2				NaN	NaN	0	NaN	366	2242	2606
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2611	12.425	NaN	3109.7	30	0	662.38	0.106			+	36340	SESSLVEEE	9	38	504.7204003243649	1007.4262477155298	2	504.72027587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SESSLVEEE_	REV__PHF14|p.K94Sfs*7|1|0.1|ENSG00000106443|chr7:10982538-10982539|-/TCTGTTG|frameshift_variant	24.20275056022122	0.577060078256802	2				NaN	NaN	0	NaN	367	2242	2606
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2612	12.427	NaN	3254.3	30	0	1103.2	0.106			+	26109	LSNSQSTWA	9	33	497.2362938597414	992.4580347862828	2	497.23626708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSNSQSTWA_	REV__ENSG00000170185|ENST00000307017|USP38;REV__nc|ENSG00000170185|Q8NB14-2|USP38;REV__USP38|p.K823Nfs*2|1|0.24|ENSG00000170185|chr4:143214440-143214440|A/-|frameshift_variant;REV__USP38|p.L816Hfs*13|1|0.05|ENSG00000170185|chr4:143214419-143214420|-/ATCATATGAAA|frameshift_variant	21.9598887501803	0.5980208138527809	2				NaN	NaN	0	NaN	368	2242	2606
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2613	12.429	NaN	3096.1	30	0	936.8	0.034	+			43990	TPGPRSAPGA	10	48	455.74173962408315	NaN	0	455.74169921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TPGPRSAPGA_	ENST00000562622.5_1_16:58163037-58163166:-|nuORF	32.81241826257853	0.3924360933802784	2				NaN	NaN	0	NaN	369	2242	2606
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2620	12.445	NaN	8286.7	30	0	2442.8	0.214	+			21690	KQENPNMR	8	68	508.7503327798197	1015.4861126264394	2	508.75054931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KQENPNMR_	ENSG00000007080|ENST00000445755|CCDC124	84.9155231211612	0.2928622555056503	2				NaN	NaN	0	NaN	373	2245	2619
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2621	12.448	NaN	9670.4	30	0	1625.1	0.106			+	-1	AMACMACPER	10	50	557.7113296109736	1113.4081062887471	2	557.7113647460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Oxidation (M)	_AM(Oxidation (M))ACM(Oxidation (M))ACPER_	REV__ENSG00000213638|ENST00000329478|ADAT3;REV__nc|ENSG00000213638|Q96EY9|ADAT3	31.954861631926434	0.6188749698950511	2				NaN	NaN	0	NaN	374	2245	2619
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2622	12.45	NaN	11723	30	0	3059.1	0.106			+	10037	ESAQVCKSH	9	65	523.2401680035562	1044.4657830739122	2	523.240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_ESAQVC(Carbamidomethyl (C))KSH_	REV__ENST00000338785.7_1_21:38886299-38886440:+|nuORF	51.19269402634007	0.2889735674168909	2				NaN	NaN	0	NaN	375	2245	2619
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2623	12.452	NaN	4440.2	30	0	1288.5	0.106	+			5180	ATTKPPPAK	9	52	455.77153903704544	909.5285251408909	2	455.77099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATTKPPPAK_	ENSG00000166197|ENST00000605788|NOLC1;nc|ENSG00000166197|Q14978-2|NOLC1;nc|ENSG00000166197|Q14978-3|NOLC1	58.22992032128504	0.22837015374068087	2				NaN	NaN	0	NaN	376	2245	2619
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2624	12.454	NaN	730.99	30	0	193.22	0.106	+			30134	PRSQISVL	8	20	450.2688293457031	NaN	0	450.2688293457031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PRSQISVL_	ENSG00000196547|ENST00000559717|MAN2A2;ENST00000560192.5_1_15:91447248-91454469:+|nuORF;MAN2A2|p.E58Lfs*11|1|0.46|ENSG00000196547|chr15:90905288-90905289|-/CCTGCCA|frameshift_variant;MAN2A2|p.V832Rfs*6|1|0.43|ENSG00000196547|chr15:90912894-90912895|-/C|frameshift_variant;nc|ENSG00000196547|P49641-1|MAN2A2;nc|ENSG00000196547|P49641-2|MAN2A2	17.364965105453717	1.7418937515398478	2				NaN	NaN	0	NaN	377	2245	2619
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2625	12.456	NaN	10823	30	0	2226.4	0.106			+	8666	EDSYDGCDNH	10	55	577.6883182253259	1153.3620835174518	2	577.6878662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EDSYDGCDNH_	REV__ENSG00000081479|ENST00000649046|LRP2	14.864876125193954	0.7409144161711139	2				NaN	NaN	0	NaN	378	2245	2619
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2626	12.458	NaN	16877	30	0	4707.5	0.038			+	-1	EMEKQIQMR	9	48	604.7912267276483	1207.5679005220966	2	604.7916259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_EM(Oxidation (M))EKQIQMR_	REV__ENSG00000204351|ENST00000375394|SKIC2;REV__ENST00000470453.1_1_6:31936465-31937326:+|nuORF;REV__ENST00000483553.5_1_6:31936441-31937206:+|nuORF;REV__ENST00000484835.1_1_6:31934891-31936687:+|nuORF;REV__ENST00000485349.5_1_6:31936258-31936911:+|nuORF;REV__SKIV2L|p.E1164Gfs*8|1|0.22|ENSG00000204351|chr6:31969365-31969366|-/G|frameshift_variant	35.61828744233558	0.47037581924408073	2				NaN	NaN	0	NaN	379	2245	2619
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2633	12.476	NaN	38590	30	0	14319	0.214			+	32106	QSHGWGQSPG	10	60	520.7299631561939	1039.4453733791877	2	520.730224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QSHGWGQSPG_	REV__ENST00000393892.7_1_17:40126102-40126558:+|nuORF	35.15202426646627	0.5927656479315102	2				NaN	NaN	0	NaN	383	2248	2632
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2634	12.479	NaN	17221	30	0	2502.4	0.106	+			5388	ATYETKESKK	10	74	592.8115507317226	1183.6085485302451	2	592.811767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATYETKESKK_	ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65623404-65625570:-|nuORF;nc|ENSG00000165410|Q9Y281-3|CFL2	136.48854661914896	0.011690315628778602	2				NaN	NaN	0	NaN	384	2248	2632
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2635	12.481	NaN	17216	30	0	2780.5	0.106	+			13660	GNHSKTYSMEE	11	60	641.7716566999162	1281.5287604666323	2	641.772216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GNHSKTYSMEE_	ENSG00000133424|ENST00000397394|LARGE1;LARGE|p.K385Qfs*24|1|0.26|ENSG00000133424|chr22:33337780-33337781|-/G|frameshift_variant;nc|ENSG00000133424|O95461-2|LARGE1	25.06778042989391	0.7268506242977556	2				NaN	NaN	0	NaN	385	2248	2632
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2636	12.483	NaN	8582.1	30	0	1934.3	0.106				-1	GESDCVVGEE	10	54	540.709676463537	1079.404799993874	2	540.70849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_GESDC(Carbamidomethyl (C))VVGEE_	ENST00000316881.8_1_17:54968766-54968946:-|nuORF	21.9598887501803	0.7004979571547932	2				NaN	NaN	0	NaN	386	2248	2632
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2637	12.485	NaN	9229.7	30	0	1254.8	0.106			+	7027	CSHSGDYFSQ	10	54	565.7120186890861	1129.4094844449721	2	565.70947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_CSHSGDYFSQ_	REV__ENSG00000099810|ENST00000644715|MTAP;REV__ENST00000419385.5_1_9:21815486-21862010:+|nuORF;REV__nc|ENSG00000099810|Q13126-2|MTAP;REV__nc|ENSG00000099810|Q13126-3|MTAP;REV__nc|ENSG00000099810|Q13126-4|MTAP;REV__nc|ENSG00000099810|Q13126-5|MTAP;REV__nc|ENSG00000099810|Q13126-6|MTAP;REV__nc|ENSG00000099810|Q13126-7|MTAP	20.94693142431847	0.7087701759873708	2				NaN	NaN	0	NaN	387	2248	2632
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2638	12.487	NaN	7882.1	30	0	1380	0.106				-1	CDSLNEQCQ	9	42	548.7058849173095	NaN	0	548.7060546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_CDSLNEQC(Carbamidomethyl (C))Q_	ENSG00000169347|ENST00000302555|GP2;nc|ENSG00000169347|P55259-2|GP2;nc|ENSG00000169347|P55259-4|GP2;nc|ENSG00000169347|P55259|GP2	15.641811463095205	0.38404136392510424	2				NaN	NaN	0	NaN	388	2248	2632
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2639	12.489	NaN	5627.4	30	0	2433.3	0.034			+	-1	CNLALRPQ	8	36	486.2589636773884	970.5033744215768	2	486.25860595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_C(Carbamidomethyl (C))NLALRPQ_	REV__ENSG00000116353|ENST00000263702|MECR;REV__ENST00000464511.1_1_1:29527026-29529677:-|nuORF;REV__ENST00000475773.5_1_1:29520676-29529710:-|nuORF;REV__nc|ENSG00000116353|Q9BV79-2|MECR	31.954861631926434	0.7126016770032289	2				NaN	NaN	0	NaN	389	2248	2632
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2646	12.506	NaN	17901	30	0	7523.1	0.214	+			7559	DHVGYAKVK	9	85	339.52206879304265	1015.544376979328	3	339.5222473144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DHVGYAKVK_	CDH23|p.F3223Lfs*43|1|0.34|ENSG00000107736|chr10:71812773-71812773|T/-|frameshift_variant;ENSG00000107736|ENST00000224721|CDH23;nc|ENSG00000107736|Q9H251-2|CDH23;nc|ENSG00000107736|Q9H251-3|CDH23;nc|ENSG00000107736|Q9H251-4|CDH23;nc|ENSG00000107736|Q9H251-5|CDH23;nc|ENSG00000107736|Q9H251-6|CDH23;nc|ENSG00000107736|Q9H251-8|CDH23	31.954861631926434	0.5046124803899898	2				NaN	NaN	0	NaN	393	2251	2645
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2647	12.51	NaN	12142	30	0	2936.8	0.106			+	21141	KKTAGEEKR	9	65	523.8013890848953	1045.5882252365905	2	523.8016357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KKTAGEEKR_	REV__ENSG00000188112|ENST00000341865|C6orf132	76.7741389293348	0.11149722112137898	2				NaN	NaN	0	NaN	394	2251	2645
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2648	12.512	NaN	6386.2	30	0	1305.6	0.106			+	31104	QFRCQEGAD	9	45	527.2237547344251	1052.4329565356502	2	527.2238159179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QFRCQEGAD_	REV__ADAMTS10|p.D476G|1|0.07|ENSG00000142303|chr19:8595814-8595814|T/C|missense_variant	21.9598887501803	0.5980208138527809	2				NaN	NaN	0	NaN	395	2251	2645
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2649	12.514	NaN	6775	30	0	3609.3	0.106	+			5636	AVDAPRRHK	9	31	350.53662034631907	1048.5880316391572	3	350.5367126464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVDAPRRHK_	ENSG00000119912|ENST00000265986|IDE;ENST00000496903.5_1_10:94214203-94257457:-|nuORF;nc|ENSG00000119912|P14735-2|IDE	26.69291269510374	0.5537881896960711	2				NaN	NaN	0	NaN	396	2251	2645
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2650	12.516	NaN	4830.5	30	0	1232.7	0.106				-1	DVLIGMNDSSE	11	40	619.2685546875	NaN	0	619.2685546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))DVLIGM(Oxidation (M))NDSSE_	RELN|p.Q1603E|1|0.24|ENSG00000189056|chr7:103566353-103566353|G/C|missense_variant	18.262085536374414	0.456735970842152	2				NaN	NaN	0	NaN	397	2251	2645
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2651	12.517	NaN	9792.2	30	0	1688.2	0.106				-1	FQTSTECWM	9	62	574.7221834154885	1147.429813897777	2	574.2623291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_FQTSTECWM(Oxidation (M))_	ENSG00000166947|ENST00000441366|EPB42;ENST00000567019.1_1_15:43489502-43501706:-|nuORF;EPB42|p.C670Sfs*10|1|0.04|ENSG00000166947|chr15:43197369-43197370|-/TATAAAGG|frameshift_variant;EPB42|p.L487Pfs*13|1|0.39|ENSG00000166947|chr15:43206488-43206489|-/G|frameshift_variant;nc|ENSG00000166947|P16452-2|EPB42	21.9598887501803	0.5980208138527809	2				NaN	NaN	0	NaN	398	2251	2645
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2652	12.519	NaN	11456	30	0	5473	0.038	+			36504	SFAHLGVASWD	11	28	595.2873813432353	1188.5602097532706	2	595.28662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SFAHLGVASWD_	ENST00000472910.5_1_7:105260689-105318420:-|nuORF	14.137123925751023	0.8042936413770803	2				NaN	NaN	0	NaN	399	2251	2645
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2662	12.543	NaN	18595	30	0	3969.3	0.214	+			29918	PLRPSTRSC	9	72	537.2811844081612	1072.5478158831222	2	537.2814331054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_PLRPSTRSC(Carbamidomethyl (C))_	nc|ENSG00000116691|Q5JXC2-2|MIIP	45.9519527083369	0.35044536499095585	2				NaN	NaN	0	NaN	406	2254	2661
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2663	12.546	NaN	12604	30	0	5350.7	0.106			+	-1	MRSPEMRCV	9	39	591.2648382479931	1180.5151235627861	2	591.2649536132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))RSPEMRC(Carbamidomethyl (C))V_	REV__TCN2|p.M258Cfs*31|1|0.16|ENSG00000185339|chr22:30615614-30615614|C/-|frameshift_variant	23.04248740728303	0.5879033540491928	2				NaN	NaN	0	NaN	407	2254	2661
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2664	12.548	NaN	4992	30	0	1704.7	0.106	+			15177	GTSGPHVGKK	10	59	484.269408306518	966.524263679836	2	484.26922607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTSGPHVGKK_	ENSG00000111859|ENST00000379446|NEDD9;ENST00000448183.6_1_6:11200558-11306280:-|nuORF;nc|ENSG00000111859|Q14511-2|NEDD9;nc|ENSG00000111859|Q14511-3|NEDD9;NEDD9|p.P245Lfs*3|2|0.37|ENSG00000111859|chr6:11191135-11191135|G/-|frameshift_variant	95.81516180277367	0.09778090853194907	2				NaN	NaN	0	NaN	408	2254	2661
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2665	12.55	NaN	6753.9	30	0	1783.1	0.106			+	-1	ICANKSSCSE	10	44	578.2436159575253	1154.4726789818505	2	578.2435302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_IC(Carbamidomethyl (C))ANKSSC(Carbamidomethyl (C))SE_	REV__ENSG00000113916|ENST00000406870|BCL6;REV__nc|ENSG00000113916|P41182-2|BCL6	20.94693142431847	0.7087701759873708	2				NaN	NaN	0	NaN	409	2254	2661
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2666	12.552	NaN	5216.1	30	0	1584.5	0.106	+			30020	PPLTEYFLN	9	51	547.2835083007812	NaN	0	547.2835083007812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PPLTEYFLN_	ENSG00000135655|ENST00000280377|USP15;ENST00000549268.1_1_12:62768286-62777812:+|nuORF;nc|ENSG00000135655|Q9Y4E8-2|USP15;nc|ENSG00000135655|Q9Y4E8-3|USP15;USP15|p.E473Nfs*8|1|0.1|ENSG00000135655|chr12:62384240-62384240|A/-|frameshift_variant;USP15|p.P403Tfs*14|1|0.17|ENSG00000135655|chr12:62383950-62383951|-/A|frameshift_variant;USP15|p.P943Lfs*17|1|0.43|ENSG00000135655|chr12:62404250-62404250|T/-|frameshift_variant;USP15|p.R760Kfs*4|2|0.23|ENSG00000135655|chr12:62391853-62391854|-/A|frameshift_variant	27.882242232435846	0.3367954786602879	2				NaN	NaN	0	NaN	410	2254	2661
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2667	12.554	NaN	3207.8	30	0	651.26	0.106	+			22861	KVKKHETQ	8	52	499.2927455967238	NaN	0	499.29266357421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KVKKHETQ_	ENSG00000147526|ENST00000317827|TACC1;ENST00000522752.5_1_8:38614850-38697853:+|nuORF;ENST00000522955.5_1_8:38663104-38684943:+|nuORF;nc|ENSG00000147526|O75410-10|TACC1;nc|ENSG00000147526|O75410-2|TACC1;nc|ENSG00000147526|O75410-3|TACC1;nc|ENSG00000147526|O75410-4|TACC1;nc|ENSG00000147526|O75410-5|TACC1;nc|ENSG00000147526|O75410-6|TACC1;nc|ENSG00000147526|O75410-7|TACC1;nc|ENSG00000147526|O75410-9|TACC1	53.351449002276354	1.7418937515398478	2				NaN	NaN	0	NaN	411	2254	2661
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2668	12.556	NaN	4289.5	30	0	945.57	0.036				-1	PATVTNAVSW	10	34	544.2755288067015	1086.5365046802028	2	544.275146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))PATVTNAVSW_	AP1M1|p.R160W|1|0.23|ENSG00000072958|chr19:16209109-16209109|C/T|missense_variant;ENSG00000072958|ENST00000291439|AP1M1;ENST00000586461.1_1_19:16319820-16337387:+|nuORF;nc|ENSG00000072958|Q9BXS5-2|AP1M1	14.864876125193954	0.7409144161711139	2				NaN	NaN	0	NaN	412	2254	2661
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2676	12.575	NaN	15417	30	0	2223.9	0.214	+			5656	AVDNNSKVK	9	72	487.76659783653486	973.5186427398697	2	487.7665710449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVDNNSKVK_	ENSG00000005194|ENST00000394391|CIAPIN1;ENST00000566284.1_1_16:57467902-57474840:-|nuORF;ENST00000584883.1_1_18:24179506-24179722:+|nuORF;nc|ENSG00000005194|Q6FI81-3|CIAPIN1	131.61620852596164	0.014413238321579053	2				NaN	NaN	0	NaN	417	2257	2675
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2677	12.579	NaN	18425	30	0	6222.1	0.106	+			3417	ASQKNFKAK	9	77	511.29282276113094	1020.5710925890619	2	511.2928161621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASQKNFKAK_	ENSG00000176731|ENST00000619594|RBIS;ENST00000523245.1_1_8:86129602-86132627:-|nuORF;nc|ENSG00000176731|Q8N0T1-2|RBIS	95.81516180277367	0.04847050768394289	2				NaN	NaN	0	NaN	418	2257	2675
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2678	12.581	NaN	11463	30	0	1918.5	0.106			+	22312	KTEWLRIT	8	72	523.8013890848953	1045.5882252365905	2	524.3030395507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KTEWLRIT_	REV__APAF1|p.E1208Gfs*14|1|0.23|ENSG00000120868|chr12:98732437-98732438|-/G|frameshift_variant;REV__ENSG00000120868|ENST00000551964|APAF1;REV__ENST00000546491.1_1_12:99093275-99106252:+|nuORF;REV__nc|ENSG00000120868|O14727-2|APAF1;REV__nc|ENSG00000120868|O14727-3|APAF1;REV__nc|ENSG00000120868|O14727-4|APAF1;REV__nc|ENSG00000120868|O14727-5|APAF1	31.529811441608018	0.715883593221515	2				NaN	NaN	0	NaN	419	2257	2675
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2679	12.583	NaN	7132.6	30	0	1873.9	0.106	+			1540	AGCRFDKIKA	10	61	583.3123636956017	NaN	0	583.3126220703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_AGC(Carbamidomethyl (C))RFDKIKA_	ENST00000354910.9_1_3:134201706-134204867:-|nuORF	101.25262130126117	0.011307420405424463	2				NaN	NaN	0	NaN	420	2257	2675
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2680	12.585	NaN	3823.5	30	0	805.14	0.106			+	8013	DTMHPNRK	8	45	499.7456817467226	997.4768105602452	2	499.74578857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DTMHPNRK_	REV__ENSG00000149289|ENST00000278590|ZC3H12C;REV__nc|ENSG00000149289|Q9C0D7-2|ZC3H12C	26.69291269510374	0.7532304684939817	2				NaN	NaN	0	NaN	421	2257	2675
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2681	12.586	NaN	7042.7	30	0	1346.4	0.106			+	27321	MHLLEPLTE	9	63	549.7780126504513	1097.5414723677025	2	549.7781982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_M(Oxidation (M))HLLEPLTE_	REV__ENSG00000135902|ENST00000258385|CHRND;REV__nc|ENSG00000135902|Q07001-2|CHRND	57.81127852772723	0.2318599694398087	2				NaN	NaN	0	NaN	422	2257	2675
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2682	12.588	NaN	4435.8	30	0	739.61	0.036			+	21945	KSAELKQQK	9	54	530.3114319378726	1058.6083109425451	2	530.3114624023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KSAELKQQK_	REV__ENSG00000100665|ENST00000557004|SERPINA4	90.60085204095205	0.06317133949006545	2				NaN	NaN	0	NaN	423	2257	2675
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2690	12.608	NaN	3518.1	30	0	534.92	0.214	+			34310	RTMETAKEK	9	62	365.1936590313047	1092.5591476941142	3	365.19378662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTMETAKEK_	ENSG00000166866|ENST00000300119|MYO1A	50.033510581677724	0.3025703251535696	2				NaN	NaN	0	NaN	428	2260	2689
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2691	12.612	NaN	5588.1	30	0	1441.6	0.106			+	21825	KREVDPVAE	9	55	521.7801972023981	1041.545841471596	2	521.7802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KREVDPVAE_	REV__ENSG00000175931|ENST00000319380|UBE2O;REV__UBE2O|p.H1018Tfs*12|1|0.32|ENSG00000175931|chr17:76392008-76392008|G/-|frameshift_variant	37.81151784470057	0.4459294069877048	2				NaN	NaN	0	NaN	429	2260	2689
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2692	12.613	NaN	4119.6	30	0	854.71	0.106	+			19594	KDEKSLKR	8	58	502.2982879285023	1002.5820229238046	2	502.2974548339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KDEKSLKR_	ANKRD11|p.D1104Mfs*214|1|0.28|ENSG00000167522|chr16:89283233-89283233|T/-|frameshift_variant;ANKRD11|p.E1199Rfs*119|1|0.34|ENSG00000167522|chr16:89282948-89282948|T/-|frameshift_variant;ANKRD11|p.I1115Tfs*203|1|0.24|ENSG00000167522|chr16:89283198-89283198|A/-|frameshift_variant;ENSG00000167522|ENST00000301030|ANKRD11;ENST00000330736.9_1_16:89334888-89371640:-|nuORF	55.50420428727701	0.5462892107279674	2				NaN	NaN	0	NaN	430	2260	2689
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2693	12.615	NaN	4234.1	30	0	785.34	0.106	+			22941	KVQEPQGKAK	10	57	556.8252940731529	NaN	0	556.8253173828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KVQEPQGKAK_	ENSG00000167397|ENST00000394975|VKORC1;ENST00000394971.7_1_16:31102457-31105584:-|nuORF;ENST00000394974.2_1_1:58694357-58694534:-|nuORF	90.60085204095205	0.05159456971369581	2				NaN	NaN	0	NaN	431	2260	2689
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2694	12.617	NaN	3241.4	30	0	582.34	0.106				-1	 	0	47	546.2370170640612	545.2297405974612	1	546.2369995117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	432	2260	2689
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2695	12.619	NaN	2084.2	30	0	983.28	0.106	+			34430	RTVGVSKKK	9	41	334.8854205064694	NaN	0	334.8854064941406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RTVGVSKKK_	ENSG00000231500|ENST00000439602|RPS18;ENST00000412454.1_1_17:14608395-14608521:-|nuORF	36.446750945000026	0.29355505452396785	2				NaN	NaN	0	NaN	433	2260	2689
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2696	12.621	NaN	4589.2	30	0	948.2	0.036				-1	CCMQMVSSD	9	57	559.6869173958452	NaN	0	559.267333984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term),Carbamidomethyl (C),Oxidation (M)	_(Acetyl (Protein N-term))C(Carbamidomethyl (C))CM(Oxidation (M))QMVSSD_	ENSG00000104059|ENST00000261275|ENTREP2;nc|ENSG00000104059|O60320-2|ENTREP2	18.324413293986947	0.3749620627292244	2				NaN	NaN	0	NaN	434	2260	2689
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2700	12.635	NaN	75732	30	0	11955	0.214	+			33	AAAKPVATK	9	94	428.76630160682816	855.5180502804564	2	428.7658996582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAAKPVATK_	COL6A3|p.G3016Vfs*19|1|0.34|ENSG00000163359|chr2:237334810-237334810|G/-|frameshift_variant;ENSG00000163359|ENST00000295550|COL6A3;ENST00000491769.1_1_2:238233419-238250825:-|nuORF;nc|ENSG00000163359|P12111-2|COL6A3;nc|ENSG00000163359|P12111-4|COL6A3	145.15565482312357	0.00806134135205793	2				NaN	NaN	0	NaN	435	2263	2699
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2701	12.638	NaN	22615	30	0	12125	0.106				-1	 	0	53	440.74534406304787	879.4761351928958	2	440.74517822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	436	2263	2699
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2702	12.64	NaN	20763	30	0	2252.7	0.106	+			40514	STYSGQHQR	9	79	532.2499856870502	1062.4854184409003	2	532.2495727539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STYSGQHQR_	ENSG00000185085|ENST00000330574|INTS5;INTS5|p.A801Hfs*4|1|0.19|ENSG00000185085|chr11:62647679-62647679|C/-|frameshift_variant	176.44474024533739	0.0016668318535579616	2				NaN	NaN	0	NaN	437	2263	2699
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2703	12.642	NaN	10217	30	0	1713.3	0.106			+	19543	KCGDDKKR	8	67	475.24787779343757	948.4812026536752	2	475.2472839355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KCGDDKKR_	REV__ENSG00000251192|ENST00000683375|ZNF674;REV__nc|ENSG00000251192|Q2M3X9-2|ZNF674;REV__nc|ENSG00000251192|Q2M3X9|ZNF674;REV__ZNF674|p.A505Pfs*32|1|0.2|ENSG00000251192|chrX:46500077-46500077|T/-|frameshift_variant	74.25504064058377	0.37144338840759816	2				NaN	NaN	0	NaN	438	2263	2699
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2704	12.644	NaN	7484.1	30	0	1343.3	0.106	+			39608	STHLTQHQK	9	59	540.2836273191643	1078.5527017051286	2	540.2835083007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STHLTQHQK_	ENSG00000096654|ENST00000683788|ZNF184	58.22992032128504	0.22837015374068087	2				NaN	NaN	0	NaN	439	2263	2699
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2705	12.646	NaN	12408	30	0	4117.8	0.106				-1	MCSVYNLK	8	46	487.226999708959	972.439446484718	2	487.2266540527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_M(Oxidation (M))CSVYNLK_	GNB3|p.I123V|1|0.28|ENSG00000111664|chr12:6843462-6843462|A/G|missense_variant	30.503639358989545	0.7238069182250283	2				NaN	NaN	0	NaN	440	2263	2699
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2706	12.648	NaN	13843	30	0	4999.9	0.036	+			9856	EPWLNCDPN	9	47	544.2289682471999	1086.4433835611997	2	544.228759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EPWLNCDPN_	ENSG00000122126|ENST00000371113|OCRL;nc|ENSG00000122126|Q01968-2|OCRL	16.473147378115264	0.6112419832031293	2				NaN	NaN	0	NaN	441	2263	2699
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2712	12.664	NaN	6876.7	30	0	2446.2	0.214			+	-1	VMFMFSGQ	8	29	481.708335461349	961.402117989498	2	481.70843505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_VMFM(Oxidation (M))FSGQ_	REV__L1MB8_dup1763|chr2:109988481-109989376:-|1.5294594278598173|0.259115602067641|2.56|476.0|48|2|anti-sense	31.954861631926434	0.7126016770032289	2				NaN	NaN	0	NaN	444	2266	2711
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2713	12.667	NaN	11989	30	0	1597.6	0.106	+			22955	KVQSVSQNK	9	71	509.2878371019562	1016.5611212707124	2	509.28814697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVQSVSQNK_	ENSG00000225921|ENST00000451315|NOL7;NOL7|p.K238Nfs*16|1|0.31|ENSG00000225921|chr6:13620760-13620760|A/-|frameshift_variant;NOL7|p.N240Mfs*14|1|0.23|ENSG00000225921|chr6:13620769-13620769|A/-|frameshift_variant	171.33049012695201	0.0025398094975457087	2				NaN	NaN	0	NaN	445	2266	2711
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2714	12.669	NaN	4502.9	30	0	2265.4	0.106	+			30056	PPYPLPGPG	9	30	447.73981951889334	893.4650861045867	2	447.73968505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PPYPLPGPG_	nc|ENSG00000137404|Q8IXM6-6|NRM;REV__ENST00000269300.8_1_17:8812418-8868918:-|nuORF	14.664097394203935	0.6112419832031292	2				NaN	NaN	0	NaN	446	2266	2711
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2715	12.671	NaN	2598.7	30	0	622.58	0.106	+			175	AAKPVATK	8	45	393.2478403049838	784.4811276767676	2	393.2478332519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AAKPVATK_	COL6A3|p.A2956Lfs*45|1|0.33|ENSG00000163359|chr2:237336234-237336234|C/-|frameshift_variant;COL6A3|p.A2957Lfs*44|1|0.33|ENSG00000163359|chr2:237336232-237336232|A/-|frameshift_variant;COL6A3|p.G3016Vfs*19|1|0.34|ENSG00000163359|chr2:237334810-237334810|G/-|frameshift_variant;COL6A3|p.G3016Vfs*19|1|0.34|ENSG00000163359|chr2:237334810-237334810|G/-|frameshift_variant;ENSG00000163359|ENST00000295550|COL6A3;ENSG00000163359|ENST00000295550|COL6A3;ENST00000491769.1_1_2:238233419-238250825:-|nuORF;ENST00000491769.1_1_2:238233419-238250825:-|nuORF;nc|ENSG00000163359|P12111-2|COL6A3;nc|ENSG00000163359|P12111-2|COL6A3;nc|ENSG00000163359|P12111-4|COL6A3;nc|ENSG00000163359|P12111-4|COL6A3	76.7741389293348	0.3504530765139327	2				NaN	NaN	0	NaN	447	2266	2711
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2716	12.673	NaN	12209	30	0	2516.5	0.106	+			22679	KVADHSGQVK	10	66	534.793829649351	1067.5731063655019	2	534.7943115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KVADHSGQVK_	ENSG00000188243|ENST00000682242|COMMD6;ENST00000477377.1_1_13:76104099-76111947:-|nuORF;nc|ENSG00000188243|Q7Z4G1-2|COMMD6	122.93914200107957	0.02317863035582428	2				NaN	NaN	0	NaN	448	2266	2711
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2717	12.675	NaN	4014	30	0	1404.8	0.106	+			42939	TEIQPHGGA	9	53	455.2230093170499	908.4314657008998	2	455.2221374511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TEIQPHGGA_	ENSG00000163661|ENST00000295927|PTX3	25.450171626174864	0.5654022654467333	2				NaN	NaN	0	NaN	449	2266	2711
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2718	12.677	NaN	5284.8	30	0	1141.9	0.037			+	-1	TEMLDCEMSS	10	34	581.2104648881434	1160.4063768430867	2	581.2107543945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_TEMLDCEM(Oxidation (M))SS_	REV__ENST00000464415.1_1_2:33817123-33824435:-|nuORF;REV__ENST00000498340.5_1_2:33812358-33824321:-|nuORF	10.865556482863946	0.761236200923858	2				NaN	NaN	0	NaN	450	2266	2711
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2722	12.691	NaN	16496	30	0	8068.6	0.214			+	46799	VHSGVLTYGTN	11	64	574.2904809503502	1146.5664089675004	2	574.29052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VHSGVLTYGTN_	REV__ENSG00000183117|ENST00000635120|CSMD1	41.42661286455405	0.5384226294179143	2				NaN	NaN	0	NaN	451	2269	2721
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2723	12.694	NaN	6442	30	0	1701.3	0.106	+			27816	MSLETVWQV	9	63	546.7731455993662	1091.5317382655323	2	546.7733764648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MSLETVWQV_	ENSG00000100697|ENST00000343455|DICER1;ENST00000527416.2_1_14:95555309-95557645:-|nuORF;ENST00000527554.2_1_14:95557369-95557645:-|nuORF;nc|ENSG00000100697|Q9UPY3-3|DICER1	30.503639358989545	0.5181749237905803	2				NaN	NaN	0	NaN	452	2269	2721
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2724	12.696	NaN	1210.5	30	0	129.03	0.106	+			16254	HEENLKTK	8	44	333.5135803222656	NaN	0	333.5135803222656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HEENLKTK_	ENSG00000136942|ENST00000348462|RPL35;ENST00000373570.8_1_9:127620199-127620799:-|nuORF;ENST00000433398.1_1_7:66071742-66071856:-|nuORF;ENST00000487431.1_1_9:127620199-127623861:-|nuORF	51.33545320467046	1.7418937515398478	2				NaN	NaN	0	NaN	453	2269	2721
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2725	12.698	NaN	5170.1	30	0	694.85	0.106				-1	CPLTCDLCNK	10	50	583.7541100021637	1165.4936670711272	2	583.7540283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_CPLTC(Carbamidomethyl (C))DLCNK_	ENSG00000170325|ENST00000360871|PRDM10;nc|ENSG00000170325|Q9NQV6-1|PRDM10;nc|ENSG00000170325|Q9NQV6-2|PRDM10;nc|ENSG00000170325|Q9NQV6-5|PRDM10;nc|ENSG00000170325|Q9NQV6-6|PRDM10;nc|ENSG00000170325|Q9NQV6-7|PRDM10;nc|ENSG00000170325|Q9NQV6|PRDM10	25.57405402267927	0.6709832231498071	2				NaN	NaN	0	NaN	454	2269	2721
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2726	12.7	NaN	10966	30	0	3385.7	0.106	+			33701	RPEDRSDAEP	10	62	586.2696530576945	1170.524753182189	2	586.2696533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RPEDRSDAEP_	ENSG00000113594|ENST00000453190|LIFR	45.97224482568171	0.49411383603842696	2				NaN	NaN	0	NaN	455	2269	2721
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2727	12.702	NaN	1414.8	30	0	328.01	0.106			+	13385	GLCRTDKE	8	31	461.226806640625	NaN	0	461.226806640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GLCRTDKE_	REV__ENSG00000113520|ENST00000231449|IL4;REV__nc|ENSG00000113520|P05112-2|IL4	23.04248740728303	1.7418937515398478	2				NaN	NaN	0	NaN	456	2269	2721
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2728	12.703	NaN	6684.8	30	0	1670	0.038			+	-1	CDFKLCMSEP	10	30	623.2504427239429	1244.4863325146857	2	623.2510986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C),Oxidation (M)	_C(Carbamidomethyl (C))DFKLCM(Oxidation (M))SEP_	REV__ENSG00000172175|ENST00000649217|MALT1;REV__nc|ENSG00000172175|Q9UDY8-2|MALT1	12.811709888998246	0.7513471912541434	2				NaN	NaN	0	NaN	457	2269	2721
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2736	12.723	NaN	14666	30	0	3068.6	0.214	+			44289	TSAPAAKPK	9	80	435.7557184146347	869.4968838960694	2	435.7556457519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSAPAAKPK_	ENSG00000189060|ENST00000340857|H1-0	79.71258880314673	0.09879134589249085	2				NaN	NaN	0	NaN	462	2272	2735
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2737	12.727	NaN	10395	30	0	2094.1	0.106	+			22739	KVCEKVQRK	9	69	587.8401084773421	NaN	0	587.8400268554688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_KVC(Carbamidomethyl (C))EKVQRK_	ENSG00000114126|ENST00000489671|TFDP2;ENSG00000198176|ENST00000375370|TFDP1;ENST00000453595.1_1_X:36980271-36981156:-|nuORF;ENST00000544902.5_1_13:114277566-114294579:+|nuORF;nc|ENSG00000114126|Q14188-2|TFDP2;nc|ENSG00000114126|Q14188-3|TFDP2;nc|ENSG00000114126|Q14188-4|TFDP2;nc|ENSG00000114126|Q14188-5|TFDP2;nc|ENSG00000114126|Q14188-6|TFDP2;nc|ENSG00000114126|Q14188-7|TFDP2;nc|ENSG00000114126|Q14188-8|TFDP2;nc|ENSG00000198176|Q14186-2|TFDP1	90.60085204095205	0.040385177724871185	2				NaN	NaN	0	NaN	463	2272	2735
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2738	12.729	NaN	18936	30	0	3218.9	0.106	+			38818	SSNDKVIKK	9	77	509.7982994683272	1017.5820460034544	2	509.79779052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSNDKVIKK_	ALDH3A1|p.P445Rfs*6|4|0.31|ENSG00000108602|chr17:19738336-19738336|G/-|frameshift_variant;ENSG00000108602|ENST00000225740|ALDH3A1;ENST00000479677.6_1_17:19641536-19646703:-|nuORF	126.24258497203832	0.01742065577488747	2				NaN	NaN	0	NaN	464	2272	2735
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2739	12.731	NaN	6775.5	30	0	697.35	0.106			+	19580	KDAAAAAALGP	11	65	478.26384209032653	954.5131312474531	2	478.2652893066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KDAAAAAALGP_	REV__ENSG00000137414|ENST00000259963|FAM8A1	75.04331003522576	0.19369523587789836	2				NaN	NaN	0	NaN	465	2272	2735
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2740	12.733	NaN	7488.4	30	0	2561.2	0.106	+			27151	MCFHCVRNCV	10	32	606.2494601641133	1210.4843673950265	2	606.7510986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MCFHCVRNCV_	DNAH10|p.D3416Mfs*54|1|0.28|ENSG00000197653|chr12:123914871-123914871|C/-|frameshift_variant;DNAH10|p.E1360*|1|0.18|ENSG00000197653|chr12:123830579-123830580|-/T|frameshift_variant;DNAH10|p.K1737Nfs*15|2|0.42|ENSG00000197653|chr12:123845799-123845799|A/-|frameshift_variant;DNAH10|p.N2655Kfs*10|1|0.19|ENSG00000197653|chr12:123877852-123877853|-/A|frameshift_variant;DNAH10|p.N3499Ifs*2|1|0.14|ENSG00000197653|chr12:123916578-123916578|A/-|frameshift_variant;DNAH10|p.P1206Lfs*12|1|0.08|ENSG00000197653|chr12:123819219-123819219|C/-|frameshift_variant;DNAH10|p.Q2965Kfs*11|1|0.57|ENSG00000197653|chr12:123894687-123894687|C/-|frameshift_variant;ENSG00000197653|ENST00000673944|DNAH10;ENST00000467219.5_1_12:124265674-124298205:+|nuORF;nc|ENSG00000197653|Q8IVF4-2|DNAH10;nc|ENSG00000197653|Q8IVF4|DNAH10	10.865556482863946	0.761236200923858	2				NaN	NaN	0	NaN	466	2272	2735
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2741	12.734	NaN	17310	30	0	2207.6	0.106	+			39015	SSSGSTAIKK	10	78	483.2665542444997	964.5185555557994	2	483.26654052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSSGSTAIKK_	ENSG00000131171|ENST00000373212|SH3BGRL;SH3BGRL|p.K19T|1|0.55|ENSG00000131171|chrX:81276994-81276994|A/C|missense_variant	123.20810148215591	0.02279876478776198	2				NaN	NaN	0	NaN	467	2272	2735
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2742	12.736	NaN	5902.2	30	0	983.99	0.037			+	-1	KCYPCVEMR	9	48	593.2638080044566	1184.513063075713	2	593.2644653320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_KC(Carbamidomethyl (C))YPCVEMR_	REV__ENSG00000141219|ENST00000535032|C17orf80;REV__nc|ENSG00000141219|Q9BSJ5-2|MTNAP1;REV__nc|ENSG00000141219|Q9BSJ5-3|MTNAP1	26.69291269510374	0.5537881896960711	2				NaN	NaN	0	NaN	468	2272	2735
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2753	12.762	NaN	33879	30	0	3413.3	0.214			+	37894	SPAAMNSAPRD	11	63	558.7587934632164	1115.5030339932327	2	558.759033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SPAAMNSAPRD_	REV__ENST00000354883.10_1_3:66271363-66271495:+|nuORF	28.081489160057373	0.6952392775027776	2				NaN	NaN	0	NaN	476	2275	2752
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2754	12.766	NaN	16640	30	0	4572.2	0.106	+			11633	FQEPHFGK	8	49	495.24581876374543	988.4770845942909	2	495.2456359863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FQEPHFGK_	ENST00000318560.5_1_9:133761568-133761826:+|nuORF	38.80614096846853	0.6637206697844082	2				NaN	NaN	0	NaN	477	2275	2752
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2755	12.768	NaN	13568	30	0	5441.7	0.106				-1	CNTSMEASPK	10	52	562.7404875082896	NaN	0	562.7406005859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_C(Carbamidomethyl (C))NTSMEASPK_	ENSG00000129680|ENST00000316077|MAP7D3;MAP7D3|p.D820Tfs*7|1|0.12|ENSG00000129680|chrX:136220794-136220794|T/-|frameshift_variant;nc|ENSG00000129680|Q8IWC1-2|MAP7D3;nc|ENSG00000129680|Q8IWC1-3|MAP7D3;nc|ENSG00000129680|Q8IWC1-4|MAP7D3	29.170058357718403	0.40439580130713204	2				NaN	NaN	0	NaN	478	2275	2752
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2756	12.77	NaN	11789	30	0	2494.9	0.106	+			36670	SGMKHQQQQ	9	56	536.2548899113137	1070.4952268894274	2	536.2546997070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SGMKHQQQQ_	BPIFA3|p.R84M|1|0.37|ENSG00000131059|chr20:33223934-33223934|G/T|missense_variant	40.77816245573522	0.41113185337114944	2				NaN	NaN	0	NaN	479	2275	2752
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2757	12.771	NaN	5809.1	30	0	2094.5	0.106			+	34002	RSHPGMPL	8	25	447.734889132844	893.455225332488	2	447.734619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RSHPGMPL_	REV__nc|ENSG00000276717|A8MTI9|PRSS47P	14.664097394203935	0.7913966407026132	2				NaN	NaN	0	NaN	480	2275	2752
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2758	12.773	NaN	8572.4	30	0	2677.2	0.106				-1	 	0	40	542.2603050031383	541.2530285365383	1	542.2601318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	481	2275	2752
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2759	12.775	NaN	8459.9	30	0	1892.2	0.035			+	-1	MQGELHNQG	9	46	515.2246932382573	1028.4348335433144	2	515.2243041992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_M(Oxidation (M))QGELHNQG_	REV__ENSG00000106392|ENST00000436587|C1GALT1;REV__ENST00000476068.1_1_7:7222357-7274193:+|nuORF;REV__nc|ENSG00000106392|Q9NS00-2|C1GALT1	39.252832667884924	0.4290233611298554	2				NaN	NaN	0	NaN	482	2275	2752
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2772	12.803	NaN	47475	30	0	16125	0.207	+			14347	GTAAKSITKK	10	91	502.8084664009235	1003.6023798686471	2	502.8083801269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTAAKSITKK_	ENSG00000133574|ENST00000255945|GIMAP4	155.5333702123263	0.007513046059728936	2				NaN	NaN	0	NaN	492	2278	2771
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2773	12.806	NaN	8499.9	30	0	1673.9	0.106	+			3122	ASGTSLHQK	9	61	464.7459178738559	927.4772828145118	2	464.7455139160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASGTSLHQK_	ENSG00000157426|ENST00000205214|AASDH;ENST00000503808.5_1_4:57204874-57250274:-|nuORF;nc|ENSG00000157426|Q4L235-2|AASDH;nc|ENSG00000157426|Q4L235-3|AASDH;nc|ENSG00000157426|Q4L235-4|AASDH	154.1183686248401	0.005909203230691971	2				NaN	NaN	0	NaN	493	2278	2771
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2774	12.808	NaN	13054	30	0	4007.8	0.106			+	47594	VRQLTFHQ	8	51	514.787655731753	1027.560758530306	2	514.7877807617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VRQLTFHQ_	REV__ENST00000571782.1_1_17:4647099-4647876:+|nuORF	35.61828744233558	0.6843154725607303	2				NaN	NaN	0	NaN	494	2278	2771
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2775	12.81	NaN	6846.3	30	0	3115.1	0.106				-1	 	0	32	500.24300677473815	499.23573030813816	1	500.2436828613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	495	2278	2771
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2776	12.812	NaN	3110.5	30	0	548.81	0.106			+	20431	KETVNQTR	8	56	488.2644858068312	974.5144186804624	2	488.2642517089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KETVNQTR_	REV__ENSG00000173826|ENST00000314672|KCNH6;REV__nc|ENSG00000173826|Q9H252-1|KCNH6;REV__nc|ENSG00000173826|Q9H252-2|KCNH6;REV__nc|ENSG00000173826|Q9H252-3|KCNH6	101.60071028292904	0.24979566554663588	2				NaN	NaN	0	NaN	496	2278	2771
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2777	12.814	NaN	6632.1	30	0	1476.8	0.106			+	23616	LAPNFEQFH	9	52	551.7682095003189	1101.5218660674377	2	551.7689819335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LAPNFEQFH_	REV__ENSG00000033100|ENST00000035307|CHPF2;REV__nc|ENSG00000033100|Q9P2E5-2|CHPF2	29.14955571784316	0.5308295550522326	2				NaN	NaN	0	NaN	497	2278	2771
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2778	12.815	NaN	4820	30	0	1069.1	0.035			+	-1	FAKCRGKK	8	39	497.78504095725816	993.5555289813163	2	497.784912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_FAKC(Carbamidomethyl (C))RGKK_	REV__ENSG00000181518|ENST00000641687|OR8D4	25.450171626174864	0.7628259754767981	2				NaN	NaN	0	NaN	498	2278	2771
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2789	12.841	NaN	6882.7	30	0	2298.5	0.214			+	23047	KVTDVKKN	8	63	466.2822254021332	930.5498978710664	2	466.2819519042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVTDVKKN_	REV__ENSG00000124486|ENST00000378308|USP9X;REV__nc|ENSG00000124486|Q93008-3|USP9X;REV__USP9X|p.K2377*|1|0.88|ENSG00000124486|chrX:41229318-41229319|-/T|frameshift_variant;REV__USP9X|p.Y1953Mfs*7|1|0.72|ENSG00000124486|chrX:41216419-41216419|T/-|frameshift_variant	71.29570347882199	0.39610197767395533	2				NaN	NaN	0	NaN	506	2281	2788
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2790	12.845	NaN	6382.4	30	0	791.73	0.106	+			40781	SVDPRRRNK	9	36	564.3233872411998	1126.6322215491996	2	564.32373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVDPRRRNK_	ENSG00000167526|ENST00000311528|RPL13;ENST00000399461.8_1_16:89627605-89629447:+|nuORF;ENST00000484610.5_1_16:89627907-89629447:+|nuORF;ENST00000563749.1_1_16:89627907-89628201:+|nuORF;ENST00000565571.5_1_16:89627367-89628201:+|nuORF	17.468008924990375	0.6112419832031292	2				NaN	NaN	0	NaN	507	2281	2788
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2791	12.847	NaN	5900.7	30	0	1415.3	0.106	+			7017	CRYTLDPRK	9	43	576.3030276551184	1150.5915023770367	2	576.3031005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_CRYTLDPRK_	CON__ENSEMBL:ENSBTAP00000032840	31.529811441608018	0.5085848003137583	2				NaN	NaN	0	NaN	508	2281	2788
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2792	12.849	NaN	3351.4	30	0	1307	0.106			+	17140	HSSPSAVAVG	10	54	456.2321074167833	910.4496619003667	2	456.232666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HSSPSAVAVG_	REV__ENST00000344823.9_1_16:3451270-3451549:+|nuORF	51.33545320467046	0.4446945571623749	2				NaN	NaN	0	NaN	509	2281	2788
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2793	12.85	NaN	3045.6	30	0	1268.5	0.106	+			29473	PCRAATPQK	9	38	486.2589636773884	970.5033744215768	2	486.2582092285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PCRAATPQK_	ENSG00000079482|ENST00000355520|OPHN1	34.172542307311794	0.4838870758800184	2				NaN	NaN	0	NaN	510	2281	2788
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2794	12.852	NaN	4519	30	0	756.94	0.106			+	-1	EDIGESTSMLK	11	27	613.2841264443193	1224.5536999554386	2	613.2833862304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_EDIGESTSM(Oxidation (M))LK_	REV__ENSG00000133454|ENST00000335473|MYO18B;REV__MYO18B|p.I1502Ffs*3|1|0.09|ENSG00000133454|chr22:25891370-25891370|A/-|frameshift_variant;REV__MYO18B|p.K1556Sfs*19|1|0.16|ENSG00000133454|chr22:25895276-25895276|A/-|frameshift_variant;REV__nc|ENSG00000133454|Q8IUG5-2|MYO18B;REV__nc|ENSG00000133454|Q8IUG5-3|MYO18B	12.206681093483082	0.8133326165653908	2				NaN	NaN	0	NaN	511	2281	2788
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2795	12.854	NaN	1967.2	30	0	587.86	0.035			+	-1	SWAINFIS	8	38	490.24837177807893	NaN	0	490.245849609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SWAINFIS_	REV__ENSG00000068885|ENST00000326448|IFT80;REV__IFT80|p.N268S|1|0.17|ENSG00000068885|chr3:160319914-160319914|T/C|missense_variant;REV__IFT80|p.V685Sfs*8|1|0.22|ENSG00000068885|chr3:160277352-160277356|CAAGG/-|frameshift_variant;REV__nc|ENSG00000068885|Q9P2H3-2|IFT80;REV__nc|ENSG00000068885|Q9P2H3-3|IFT80	23.04248740728303	1.7418937515398478	2				NaN	NaN	0	NaN	512	2281	2788
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2802	12.872	NaN	4108.3	30	0	831.53	0.214	+			40244	STSGQIRQK	9	66	502.77767953663977	1003.5408061400796	2	502.77801513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STSGQIRQK_	DGKD|p.G855Vfs*48|1|0.29|ENSG00000077044|chr2:233457306-233457306|G/-|frameshift_variant;ENSG00000077044|ENST00000264057|DGKD	79.71258880314673	0.09879134589249085	2				NaN	NaN	0	NaN	516	2284	2801
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2803	12.876	NaN	6435.9	30	0	1496.6	0.106	+			22258	KTATAVAHCK	10	65	543.7900266001657	1085.5655002671313	2	543.7900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_KTATAVAHC(Carbamidomethyl (C))K_	chr19:39435705-39435848|468|276.17|0.0|24.72|-|0|RPS16,RPS16|1;ENSG00000105193|ENST00000251453|RPS16;ENST00000601390.1_1_19:39926180-39926535:-|nuORF	112.10723106719422	0.0417416748461292	2				NaN	NaN	0	NaN	517	2284	2801
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2804	12.878	NaN	8656.9	30	0	1989.1	0.106	+			14942	GTMGVSKHK	9	63	472.75250049337956	943.4904480535591	2	472.75238037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTMGVSKHK_	ENSG00000125676|ENST00000245838|THOC2;nc|ENSG00000125676|Q8NI27-2|THOC2	95.81516180277367	0.04847050768394289	2				NaN	NaN	0	NaN	518	2284	2801
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2805	12.879	NaN	4291.3	30	0	655.15	0.106			+	35748	SDTLYYYKQ	9	32	590.7797119236103	1179.5448709140205	2	590.7809448242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SDTLYYYKQ_	REV__tr|U7SM12|U7SM12_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02012PE=4SV=1	15.641811463095205	0.6112419832031292	2				NaN	NaN	0	NaN	519	2284	2801
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2806	12.881	NaN	3364.8	30	0	608.76	0.106	+			31749	QPDFIYLR	8	49	526.2815401428966	1050.548527352593	2	526.281494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QPDFIYLR_	ENSG00000050438|ENST00000453097|SLC4A8;ENSG00000080493|ENST00000264485|SLC4A4;ENSG00000144290|ENST00000446997|SLC4A10;ENST00000319957.10_1_12:51818771-51890959:+|nuORF;ENST00000446228.5_1_2:162758621-162834241:+|nuORF;ENST00000546872.1_1_12:51888707-51890959:+|nuORF;nc|ENSG00000050438|Q2Y0W8-2|SLC4A8;nc|ENSG00000050438|Q2Y0W8-3|SLC4A8;nc|ENSG00000050438|Q2Y0W8-4|SLC4A8;nc|ENSG00000050438|Q2Y0W8-5|SLC4A8;nc|ENSG00000080493|Q9Y6R1-2|SLC4A4;nc|ENSG00000080493|Q9Y6R1-4|SLC4A4;nc|ENSG00000080493|Q9Y6R1-5|SLC4A4;nc|ENSG00000144290|Q6U841-2|SLC4A10;nc|ENSG00000144290|Q6U841-3|SLC4A10;SLC4A4|p.N1031Sfs*30|1|0.06|ENSG00000080493|chr4:71560246-71560247|-/GCTAC|frameshift_variant	47.91560031466742	0.6071945918984287	2				NaN	NaN	0	NaN	520	2284	2801
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2807	12.883	NaN	4525.4	30	0	1327.9	0.106			+	-1	CMLIKKSNCM	10	22	630.2857318187747	1258.5569107043493	2	630.286376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),2 Oxidation (M)	_CM(Oxidation (M))LIKKSNC(Carbamidomethyl (C))M(Oxidation (M))_	REV__ENST00000401026.7_1_1:93744026-93744059:+|nuORF	9.705651100619752	0.7671300402814404	2				NaN	NaN	0	NaN	521	2284	2801
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2808	12.885	NaN	4653.5	30	0	1094.5	0.038	+			30792	QEAKRPQYCS	10	24	605.2871334868274	1208.5597140404548	2	605.2849731445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QEAKRPQYCS_	ENSG00000138347|ENST00000358913|MYPN;MYPN|p.I891*|1|0.12|ENSG00000138347|chr10:68175423-68175423|A/-|frameshift_variant;MYPN|p.K575Nfs*9|1|0.23|ENSG00000138347|chr10:68166410-68166410|C/-|frameshift_variant	9.182911543092327	0.7697862422657429	2				NaN	NaN	0	NaN	522	2284	2801
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2814	12.9	NaN	17556	30	0	2582.1	0.214	+			471	AAVSRVQAGP	10	85	478.2691031370506	954.5236533409012	2	479.27154541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAVSRVQAGP_	ENSG00000185298|ENST00000329214|CCDC137	49.44154591367651	0.46214596422418036	2				NaN	NaN	0	NaN	525	2287	2813
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2815	12.903	NaN	8722.4	30	0	2425.1	0.106			+	-1	MTELDVKH	8	39	507.749090290592	1013.483627647984	2	507.7491455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))MTELDVKH_	REV__ENSG00000053108|ENST00000265342|FSTL4;REV__ENST00000509525.5_1_5:132534789-132560973:-|nuORF;REV__FSTL4|p.A620T|1|0.35|ENSG00000053108|chr5:133199766-133199766|C/T|missense_variant;REV__FSTL4|p.G790Vfs*6|1|0.38|ENSG00000053108|chr5:133199255-133199255|C/-|frameshift_variant;REV__nc|ENSG00000053108|Q6MZW2-2|FSTL4	24.20275056022122	0.7724576178584145	2				NaN	NaN	0	NaN	526	2287	2813
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2816	12.905	NaN	9328.2	30	0	3268.5	0.106			+	28742	NNVTAGQHQ	9	47	484.7314626886787	NaN	0	484.73150634765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NNVTAGQHQ_	REV__ENSG00000181827|ENST00000559447|RFX7;REV__nc|ENSG00000181827|Q2KHR2-1|RFX7;REV__nc|ENSG00000181827|Q2KHR2-2|RFX7;REV__RFX7|p.I1152*|2|0.36|ENSG00000181827|chr15:56093983-56093983|T/-|frameshift_variant	29.14955571784316	0.3303970763161698	2				NaN	NaN	0	NaN	527	2287	2813
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2817	12.907	NaN	5939.2	30	0	1933.4	0.106	+			33748	RPQGRGSGRNS	11	41	586.3049908991968	1170.5954288651935	2	586.304443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RPQGRGSGRNS_	ENST00000289816.9_2_16:89804878-89805280:+|nuORF	22.579656572578934	0.7529490144093228	2				NaN	NaN	0	NaN	528	2287	2813
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2818	12.909	NaN	1819.2	30	0	502.65	0.106			+	22752	KVDWISPS	8	43	466.2457350289345	930.4769171246691	2	466.2451477050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KVDWISPS_	REV__ENSG00000151952|ENST00000422113|TMEM132D;REV__TMEM132D|p.S1011Afs*35|1|0.47|ENSG00000151952|chr12:129074144-129074144|T/-|frameshift_variant	47.91560031466742	0.6071945918984287	2				NaN	NaN	0	NaN	529	2287	2813
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2819	12.911	NaN	6783.2	30	0	1510.7	0.106			+	20734	KGTKESRSPG	10	63	523.7834514081809	1045.5523498831617	2	523.78369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KGTKESRSPG_	REV__ENSG00000258366|ENST00000360203|RTEL1;REV__ENST00000480273.5_1_20:62319266-62327135:+|nuORF;REV__ENST00000496281.1_1_20:62323608-62327208:+|nuORF;REV__ENST00000496816.5_1_20:62325699-62327208:+|nuORF;REV__nc|ENSG00000258366|Q9NZ71-2|RTEL1;REV__nc|ENSG00000258366|Q9NZ71-5|RTEL1;REV__nc|ENSG00000258366|Q9NZ71-7|RTEL1;REV__nc|ENSG00000258366|Q9NZ71-9|RTEL1;REV__nc|ENSG00000258366|Q9NZ71|RTEL1	77.31757898189308	0.2175361111083648	2				NaN	NaN	0	NaN	530	2287	2813
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2820	12.912	NaN	5446.6	30	0	1714.8	0.035				-1	SGVYCGPLK	9	35	490.7482603812492	979.4819678292985	2	491.2503662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_SGVYC(Carbamidomethyl (C))GPLK_	ENSG00000156502|ENST00000359655|SUPV3L1;ENST00000486661.1_1_10:70949041-70955032:+|nuORF	37.15910966729921	0.4535818937225704	2				NaN	NaN	0	NaN	531	2287	2813
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2828	12.932	NaN	32690	30	0	5678.4	0.214			+	38414	SSAGIKRPQ	9	89	472.26961850519626	942.5246840771925	2	472.2693176269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSAGIKRPQ_	REV__ENSG00000156414|ENST00000409874|TDRD9;REV__nc|ENSG00000156414|Q8NDG6-2|TDRD9	62.107414245175825	0.1960472003779324	2				NaN	NaN	0	NaN	536	2290	2827
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2829	12.936	NaN	9977.4	30	0	1920.3	0.106				-1	LQKAQSKMES	10	46	583.2978361451563	1164.5811193571126	2	583.2977294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LQKAQSKM(Oxidation (M))ES_	ENSG00000250423|ENST00000691062|KIAA1210;nc|ENSG00000250423|Q9ULL0|KIAA1210	14.864876125193954	0.7409144161711139	2				NaN	NaN	0	NaN	537	2290	2827
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2830	12.938	NaN	8161.3	30	0	1259	0.106	+			22782	KVFEKSRNK	9	63	568.3328944622828	1134.6512359913654	2	568.332763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KVFEKSRNK_	ENSG00000164506|ENST00000321680|STXBP5;nc|ENSG00000164506|Q5T5C0-2|STXBP5;nc|ENSG00000164506|Q5T5C0-3|STXBP5	65.15724298150197	0.17062369902793603	2				NaN	NaN	0	NaN	538	2290	2827
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2831	12.94	NaN	9279.9	30	0	1012.1	0.106			+	-1	NPMGKMESCVM	11	39	642.2663975189395	1282.5182421046788	2	642.2666625976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_NPMGKMESC(Carbamidomethyl (C))VM_	REV__ENSG00000172139|ENST00000305815|SLC9C1;REV__nc|ENSG00000172139|Q4G0N8-2|SLC9C1;REV__SLC9C1|p.F702Lfs*6|1|0.31|ENSG00000172139|chr3:112204284-112204284|A/-|frameshift_variant;REV__SLC9C1|p.S672Hfs*9|3|0.24|ENSG00000172139|chr3:112204376-112204376|A/-|frameshift_variant;REV__SLC9C1|p.T1117Hfs*4|1|0.38|ENSG00000172139|chr3:112167236-112167236|T/-|frameshift_variant	22.579656572578934	0.7529490144093228	2				NaN	NaN	0	NaN	539	2290	2827
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2832	12.942	NaN	5850.8	30	0	1743.8	0.106	+			10123	ESNIIRHYK	9	29	580.3124389648438	NaN	0	580.3124389648438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ESNIIRHYK_	ENSG00000188994|ENST00000369577|ZNF292;nc|ENSG00000188994|O60281-2|ZNF292;ZNF292|p.N2626Kfs*10|1|0.07|ENSG00000188994|chr6:87261506-87261509|ATTC/-|frameshift_variant;ZNF292|p.R2545Gfs*14|1|0.18|ENSG00000188994|chr6:87261256-87261256|A/-|frameshift_variant	14.864876125193954	0.3866709117995958	2				NaN	NaN	0	NaN	540	2290	2827
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2833	12.943	NaN	5665.3	30	0	581.28	0.106				-1	CSLTCDDCRNG	11	27	679.2476610972452	1356.4807692612903	2	679.2471313476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	3 Carbamidomethyl (C)	_C(Carbamidomethyl (C))SLTC(Carbamidomethyl (C))DDC(Carbamidomethyl (C))RNG_	ENSG00000162591|ENST00000356575|MEGF6;MEGF6|p.A1440Gfs*4|1|0.29|ENSG00000162591|chr1:3493839-3493840|-/C|frameshift_variant;MEGF6|p.A1440Hfs*78|2|0.41|ENSG00000162591|chr1:3493840-3493840|C/-|frameshift_variant;MEGF6|p.R1079Gfs*195|1|0.36|ENSG00000162591|chr1:3498488-3498488|G/-|frameshift_variant;nc|ENSG00000162591|O75095-2|MEGF6	7.804521658770766	0.8339449907006061	2				NaN	NaN	0	NaN	541	2290	2827
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2834	12.945	NaN	1293.7	30	0	249.73	0.036			+	-1	SALTAMVVML	10	31	351.1895114890784	1050.5467050674354	3	351.1895446777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_SALTAM(Oxidation (M))VVML_	REV__ENSG00000127481|ENST00000375254|UBR4;REV__ENST00000419533.1_1_1:19477984-19504233:-|nuORF;REV__nc|ENSG00000127481|Q5T4S7-2|UBR4;REV__nc|ENSG00000127481|Q5T4S7-3|UBR4;REV__nc|ENSG00000127481|Q5T4S7-4|UBR4;REV__nc|ENSG00000127481|Q5T4S7-5|UBR4;REV__UBR4|p.C4515Wfs*2|1|0.06|ENSG00000127481|chr1:19095626-19095626|G/-|frameshift_variant;REV__UBR4|p.L4771Cfs*7|1|0.25|ENSG00000127481|chr1:19088878-19088878|G/-|frameshift_variant;REV__UBR4|p.P4047Ifs*4|1|0.4|ENSG00000127481|chr1:19106932-19106933|GG/-|frameshift_variant	22.579656572578934	0.6954366826851017	2				NaN	NaN	0	NaN	542	2290	2827
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2846	12.971	NaN	35172	30	0	14658	0.213				-1	PERCVTRGTR	10	87	616.3196012048427	1230.6246494764853	2	616.3191528320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_PERC(Carbamidomethyl (C))VTRGTR_	ENST00000288699.10_1_2:27172487-27172649:+|nuORF	52.936696900407355	0.4300801048568001	2				NaN	NaN	0	NaN	551	2293	2845
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2847	12.975	NaN	53019	30	0	11769	0.106	+			20536	KFKQELNHQ	9	92	586.3124574200235	1170.610361906847	2	586.3106079101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KFKQELNHQ_	ENSG00000163840|ENST00000296161|DTX3L	95.81516180277367	0.04847050768394289	2				NaN	NaN	0	NaN	552	2293	2845
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2848	12.977	NaN	4453.7	30	0	699.98	0.106	+			38148	SQAGHTLHH	9	60	494.24141200635773	986.4682710795155	2	494.2413024902344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SQAGHTLHH_	ENSG00000057294|ENST00000340811|PKP2;nc|ENSG00000057294|Q99959|PKP2;PKP2|p.K456Nfs*3|1|0.41|ENSG00000057294|chr12:32850776-32850776|T/-|frameshift_variant	80.45461616416974	0.09558281504443908	2				NaN	NaN	0	NaN	553	2293	2845
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2849	12.979	NaN	4101.9	30	0	816.69	0.106			+	43403	TGIKLKGTK	9	57	473.30819975080533	944.6018465684107	2	473.3078918457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TGIKLKGTK_	REV__ENSG00000076685|ENST00000404739|NT5C2;REV__ENST00000469228.1_1_10:104853627-104854248:-|nuORF;REV__nc|ENSG00000076685|P49902-2|NT5C2	35.61828744233558	0.47037581924408073	2				NaN	NaN	0	NaN	554	2293	2845
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2850	12.981	NaN	2269.5	30	0	436.33	0.106			+	23145	KVYAKNDE	8	48	483.7492618064456	NaN	0	483.7494201660156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KVYAKNDE_	REV__tr|U7SS58|U7SS58_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01553PE=4SV=1	35.61828744233558	1.7418937515398478	2				NaN	NaN	0	NaN	555	2293	2845
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2851	12.982	NaN	43089	30	0	16410	0.106			+	-1	FPNEKCSSKV	10	69	598.2920484898028	1194.5695440464056	2	598.82666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_FPNEKC(Carbamidomethyl (C))SSKV_	REV__ENSG00000100139|ENST00000215957|MICALL1	62.107414245175825	0.3466735403679669	2				NaN	NaN	0	NaN	556	2293	2845
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2852	12.984	NaN	1498.6	30	0	294.29	0.035	+			22190	KSTEEEHK	8	36	329.829833984375	NaN	0	329.829833984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KSTEEEHK_	ENSG00000135945|ENST00000258428|REV1;ENST00000413697.5_1_2:100019089-100065949:-|nuORF;nc|ENSG00000135945|Q9UBZ9-2|REV1;REV1|p.T1079Pfs*12|1|0.42|ENSG00000135945|chr2:99403038-99403038|T/-|frameshift_variant	26.69291269510374	1.7418937515398478	2				NaN	NaN	0	NaN	557	2293	2845
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2864	13.01	NaN	113490	30	0	48573	0.162			+	48534	VTNSFDLPMR	10	67	598.2920484898028	1194.5695440464056	2	598.2919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_VTNSFDLPM(Oxidation (M))R_	REV__NLRC3|p.T226M|1|0.42|ENSG00000167984|chr16:3564260-3564260|G/A|missense_variant	85.16082228582465	0.15877915086237185	2				NaN	NaN	0	NaN	566	2296	2863
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2865	13.013	NaN	47089	30	0	13885	0.106				-1	YGYYPCFRGS	10	73	635.2732792443587	NaN	0	635.2732543945312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_YGYYPC(Carbamidomethyl (C))FRGS_	ENSG00000137672|ENST00000344327|TRPC6;nc|ENSG00000137672|Q9Y210-2|TRPC6;nc|ENSG00000137672|Q9Y210-3|TRPC6;TRPC6|p.G794Rfs*13|1|0.31|ENSG00000137672|chr11:101471212-101471213|-/T|frameshift_variant;TRPC6|p.G794Vfs*8|1|0.27|ENSG00000137672|chr11:101471213-101471213|T/-|frameshift_variant	26.69291269510374	0.4125295221340092	2				NaN	NaN	0	NaN	567	2296	2863
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2866	13.015	NaN	18453	30	0	6294.2	0.106			+	-1	MTNAGLCIYMC	11	45	639.2544514905077	1276.4943500478153	2	639.2550048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))MTNAGLCIYM(Oxidation (M))C_	REV__FGFRL1|p.G334C|1|0.48|ENSG00000127418|chr4:1024592-1024592|G/T|missense_variant	18.262085536374414	0.7849791996189919	2				NaN	NaN	0	NaN	568	2296	2863
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2867	13.016	NaN	17191	30	0	2564.5	0.106				-1	QIESLETEME	10	64	612.7689913802932	NaN	0	612.7689819335938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_QIESLETEM(Oxidation (M))E_	ENSG00000090889|ENST00000374403|KIF4A;ENSG00000226650|ENST00000435029|KIF4B;nc|ENSG00000090889|O95239-2|KIF4A	30.317721548370564	0.4006274431774794	2				NaN	NaN	0	NaN	569	2296	2863
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2868	13.018	NaN	17196	30	0	3957.1	0.106			+	45214	TVNSSFCVDVF	11	63	609.2816331440723	1216.5487133549445	2	609.2811889648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TVNSSFCVDVF_	REV__OR5M3|p.W70C|1|0.31|ENSG00000174937|chr11:56470288-56470288|C/G|missense_variant	36.446750945000026	0.6065623449959539	2				NaN	NaN	0	NaN	570	2296	2863
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2869	13.02	NaN	11952	30	0	2282.4	0.106			+	-1	QRLCPDCQSW	10	46	646.7799127615473	NaN	0	647.2527465820312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_QRLC(Carbamidomethyl (C))PDCQSW_	REV__C9|p.C142Afs*6|1|0.25|ENSG00000113600|chr5:39341199-39341199|G/-|frameshift_variant;REV__C9|p.L339Ffs*10|1|0.22|ENSG00000113600|chr5:39311231-39311232|-/A|frameshift_variant;REV__C9|p.M293Cfs*5|1|0.21|ENSG00000113600|chr5:39311371-39311371|T/-|frameshift_variant;REV__C9|p.N277Mfs*21|1|0.37|ENSG00000113600|chr5:39315815-39315815|T/-|frameshift_variant;REV__ENSG00000113600|ENST00000263408|C9	19.996771675451527	0.4201028297492154	2				NaN	NaN	0	NaN	571	2296	2863
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2870	13.022	NaN	10889	30	0	1828.3	0.039			+	-1	TNCKCVTINCC	11	43	658.265003680157	NaN	0	658.2650756835938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C)	_TNC(Carbamidomethyl (C))KCVTINCC(Carbamidomethyl (C))_	REV__nc|ENSG00000198788|Q02817|MUC2	16.006774744331256	0.456735970842152	2				NaN	NaN	0	NaN	572	2296	2863
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2871	13.023	NaN	9941.2	30	0	2944.3	0.144			+	-1	GTWCCRSCCGS	11	56	667.2312447287242	NaN	0	667.231201171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	3 Carbamidomethyl (C)	_GTWC(Carbamidomethyl (C))CRSC(Carbamidomethyl (C))C(Carbamidomethyl (C))GS_	REV__SLC46A2|p.L90Cfs*53|1|0.25|ENSG00000119457|chr9:112890414-112890414|G/-|frameshift_variant	19.1035232394073	0.456735970842152	2				NaN	NaN	0	NaN	573	2296	2863
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2882	13.05	NaN	45121	30	0	6541	0.195	+			6263	AVSKVSTNK	9	91	467.2719070238918	932.5292611145836	2	467.2716369628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVSKVSTNK_	ENSG00000173744|ENST00000310078|AGFG1;nc|ENSG00000173744|P52594-2|AGFG1;nc|ENSG00000173744|P52594-3|AGFG1;nc|ENSG00000173744|P52594-4|AGFG1	169.6522961985778	0.0028262690464207238	2				NaN	NaN	0	NaN	581	2299	2881
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2883	13.053	NaN	79854	30	0	11685	0.106	+			39041	SSSPGTSVKK	10	92	489.26690725599576	976.5192615787915	2	489.2665710449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSSPGTSVKK_	ENSG00000135720|ENST00000258198|DYNC1LI2;nc|ENSG00000135720|O43237-2|DYNC1LI2	126.24258497203832	0.01851300475414303	2				NaN	NaN	0	NaN	582	2299	2881
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2884	13.055	NaN	15917	30	0	4972.1	0.106	+			3476	ASSEFAKKK	9	81	498.279908384148	994.545263835096	2	498.2796325683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASSEFAKKK_	DHX38|p.A739Pfs*17|1|0.38|ENSG00000140829|chr16:72105086-72105086|G/-|frameshift_variant;DHX38|p.E514K|1|0.33|ENSG00000140829|chr16:72103114-72103114|G/A|missense_variant;DHX38|p.G603Efs*22|1|0.36|ENSG00000140829|chr16:72103767-72103767|G/-|frameshift_variant;DHX38|p.G697Wfs*16|1|0.38|ENSG00000140829|chr16:72104557-72104558|-/T|frameshift_variant;ENSG00000140829|ENST00000268482|DHX38;ENST00000566329.1_1_16:72134993-72137705:+|nuORF	129.42129120953632	0.01549634589885217	2				NaN	NaN	0	NaN	583	2299	2881
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2885	13.057	NaN	3511.5	30	0	496.44	0.106	+			35327	SANGAAIKK	9	49	430.2534382094559	858.4923234857118	2	430.2532653808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SANGAAIKK_	ENSG00000129757|ENST00000440480|CDKN1C;nc|ENSG00000129757|P49918|CDKN1C	82.24051045832904	0.08786059719216216	2				NaN	NaN	0	NaN	584	2299	2881
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2886	13.059	NaN	24690	30	0	4050.3	0.106			+	9290	EHMRAVDK	8	61	501.2456844249118	1000.4768159166237	2	501.24560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_EHM(Oxidation (M))RAVDK_	REV__SPG7|p.G313R|1|0.31|ENSG00000197912|chr16:89530758-89530758|G/A|missense_variant	51.33545320467046	0.5859736979383976	2				NaN	NaN	0	NaN	585	2299	2881
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2887	13.061	NaN	3799	30	0	875.29	0.106			+	3350	ASNFISKTK	9	27	332.52201805105153	994.5442247533547	3	332.5221862792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASNFISKTK_	REV__ENSG00000101040|ENST00000471951|ZMYND8;REV__ENST00000468376.2_1_20:45867286-45947776:-|nuORF;REV__nc|ENSG00000101040|Q9ULU4-10|ZMYND8;REV__nc|ENSG00000101040|Q9ULU4-11|ZMYND8;REV__nc|ENSG00000101040|Q9ULU4-12|ZMYND8;REV__nc|ENSG00000101040|Q9ULU4-13|ZMYND8;REV__nc|ENSG00000101040|Q9ULU4-14|ZMYND8;REV__nc|ENSG00000101040|Q9ULU4-15|ZMYND8;REV__nc|ENSG00000101040|Q9ULU4-16|ZMYND8;REV__nc|ENSG00000101040|Q9ULU4-17|ZMYND8;REV__nc|ENSG00000101040|Q9ULU4-18|ZMYND8;REV__nc|ENSG00000101040|Q9ULU4-19|ZMYND8;REV__nc|ENSG00000101040|Q9ULU4-20|ZMYND8;REV__nc|ENSG00000101040|Q9ULU4-21|ZMYND8;REV__nc|ENSG00000101040|Q9ULU4-22|ZMYND8;REV__nc|ENSG00000101040|Q9ULU4-23|ZMYND8;REV__nc|ENSG00000101040|Q9ULU4-3|ZMYND8;REV__nc|ENSG00000101040|Q9ULU4-5|ZMYND8;REV__nc|ENSG00000101040|Q9ULU4-6|ZMYND8;REV__nc|ENSG00000101040|Q9ULU4-8|ZMYND8;REV__nc|ENSG00000101040|Q9ULU4-9|ZMYND8;REV__nc|ENSG00000101040|Q9ULU4|ZMYND8;REV__ZMYND8|p.K635Sfs*14|1|0.17|ENSG00000101040|chr20:47246328-47246328|T/-|frameshift_variant;REV__ZMYND8|p.S650Afs*37|1|0.3|ENSG00000101040|chr20:47246284-47246284|T/-|frameshift_variant	19.996771675451527	0.6112419832031292	2				NaN	NaN	0	NaN	586	2299	2881
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2888	13.063	NaN	7270.7	30	0	1489.2	0.036	+			32502	QVQAVLQRK	9	61	535.3274863396122	1068.6404197460242	2	535.3272705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QVQAVLQRK_	ENSG00000090615|ENST00000450791|GOLGA3;nc|ENSG00000090615|Q08378-2|GOLGA3	44.377184641726394	0.36891676396732553	2				NaN	NaN	0	NaN	587	2299	2881
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2897	13.083	NaN	53863	30	0	8472.1	0.214	+			3931	ATASRVLTH	9	102	478.2691031370506	954.5236533409012	2	478.2693176269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATASRVLTH_	ENST00000482818.1_1_22:29724072-29724282:-|nuORF	143.10689835833298	0.00902249513149409	2				NaN	NaN	0	NaN	593	2302	2896
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2898	13.086	NaN	31170	30	0	5354.2	0.106				-1	TSHLDCSQQ	9	67	538.2269862242899	1074.4394195153798	2	538.2276611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_TSHLDC(Carbamidomethyl (C))SQQ_	nc|ENSG00000229086|A6NM66|LINC01548	24.519189625965996	0.574102787014149	2				NaN	NaN	0	NaN	594	2302	2896
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2899	13.088	NaN	27242	30	0	3432.6	0.106	+			6096	AVNKQLHQK	9	80	533.3131325119145	1064.611712090629	2	533.3125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVNKQLHQK_	ENSG00000128944|ENST00000249776|KNSTRN;ENST00000560220.5_1_15:40676698-40685795:+|nuORF;nc|ENSG00000128944|Q9Y448-2|KNSTRN;nc|ENSG00000128944|Q9Y448-3|KNSTRN	127.46168284122857	0.016682644177004526	2				NaN	NaN	0	NaN	595	2302	2896
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2900	13.09	NaN	15825	30	0	2386.7	0.106			+	-1	KPDMCCCIG	9	61	550.2062934114149	1098.3980338896297	2	550.2067260742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C),Oxidation (M)	_KPDM(Oxidation (M))C(Carbamidomethyl (C))C(Carbamidomethyl (C))CIG_	REV__ENSG00000143669|ENST00000389793|LYST;REV__ENST00000465349.5_1_1:235954948-235996891:-|nuORF;REV__ENST00000489585.5_1_1:235926109-235996891:-|nuORF;REV__LYST|p.E1851Dfs*2|1|0.15|ENSG00000143669|chr1:235774994-235774994|T/-|frameshift_variant;REV__LYST|p.F2078Lfs*38|1|0.35|ENSG00000143669|chr1:235762739-235762739|A/-|frameshift_variant;REV__nc|ENSG00000143669|Q99698-2|LYST;REV__nc|ENSG00000143669|Q99698-3|LYST	24.20275056022122	0.577060078256802	2				NaN	NaN	0	NaN	596	2302	2896
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2901	13.092	NaN	12926	30	0	3229.1	0.106				-1	LLACEVCSM	9	56	521.2261496783457	1040.4377464234913	2	521.2251586914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C),Oxidation (M)	_LLACEVC(Carbamidomethyl (C))SM(Oxidation (M))_	tr|U7SNI1|U7SNI1_FUSNUGAFdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01767PE=4SV=1	26.79610172149135	0.5528238334041078	2				NaN	NaN	0	NaN	597	2302	2896
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2902	13.094	NaN	7619.1	30	0	1141	0.106			+	-1	DHCSVRNK	8	57	508.2404471916588	1014.4663414501176	2	508.24005126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_DHC(Carbamidomethyl (C))SVRNK_	REV__ENSG00000198000|ENST00000442668|NOL8;REV__nc|ENSG00000198000|Q76FK4-2|NOL8;REV__nc|ENSG00000198000|Q76FK4-4|NOL8;REV__NOL8|p.D1050*|1|0.39|ENSG00000198000|chr9:92301578-92301579|-/A|frameshift_variant	29.14955571784316	0.7342621283720113	2				NaN	NaN	0	NaN	598	2302	2896
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2903	13.095	NaN	12208	30	0	1375.4	0.036			+	-1	PEELCFCR	8	64	527.2291485129846	1052.443744092769	2	527.2300415039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_PEELC(Carbamidomethyl (C))FCR_	REV__COL16A1|p.G453Afs*8|1|0.25|ENSG00000084636|chr1:31691459-31691459|G/-|frameshift_variant;REV__ENSG00000084636|ENST00000373672|COL16A1;REV__nc|ENSG00000084636|Q07092-2|COL16A1	25.450171626174864	0.7628259754767981	2				NaN	NaN	0	NaN	599	2302	2896
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2915	13.121	NaN	125540	30	0	18354	0.19	+			3481	ASSGALRSK	9	114	438.7484178946945	875.482282856189	2	438.7483215332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASSGALRSK_	ENSG00000067066|ENST00000340126|SP100;nc|ENSG00000067066|P23497-2|SP100;nc|ENSG00000067066|P23497-3|SP100;nc|ENSG00000067066|P23497-5|SP100;nc|ENSG00000067066|P23497-6|SP100;nc|ENSG00000067066|P23497-7|SP100;nc|ENSG00000067066|P23497|SP100;SP100|p.A416T|1|0.67|ENSG00000067066|chr2:230467170-230467170|G/A|missense_variant	128.60217544463768	0.015992218256422188	2				NaN	NaN	0	NaN	608	2305	2914
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2916	13.125	NaN	32898	30	0	3798.9	0.106	+			3537	ASSSGSTAIKK	11	98	518.785580307041	1035.5566076808818	2	518.78564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASSSGSTAIKK_	ENSG00000131171|ENST00000373212|SH3BGRL	97.59673978297657	0.06767575942783079	2				NaN	NaN	0	NaN	609	2305	2914
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2917	13.127	NaN	20621	30	0	5504.6	0.106				-1	 	0	58	450.72763816247686	899.4407233917537	2	450.7274169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	610	2305	2914
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2918	13.128	NaN	12374	30	0	2783.8	0.106	+			4358	ATGSEVSQRK	10	75	531.7810947413016	1061.547636549403	2	531.7809448242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATGSEVSQRK_	ENSG00000096696|ENST00000379802|DSP	55.721020083383095	0.4047570224426313	2				NaN	NaN	0	NaN	611	2305	2914
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2919	13.13	NaN	9879.6	30	0	1555.2	0.106			+	21313	KLTAKRNE	8	66	480.2850396704419	NaN	0	480.2850341796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KLTAKRNE_	REV__ENST00000505627.2_1_8:62673655-62673919:-|nuORF	102.7733458925114	1.7418937515398478	2				NaN	NaN	0	NaN	612	2305	2914
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2920	13.132	NaN	22375	30	0	4183.9	0.106	+			38988	SSSEPVHAK	9	74	471.2380302212545	940.4615075093091	2	471.2377624511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSSEPVHAK_	ENSG00000173145|ENST00000371361|NOC3L;NOC3L|p.K235Nfs*2|1|0.43|ENSG00000173145|chr10:94353049-94353049|T/-|frameshift_variant;NOC3L|p.L425Yfs*3|1|0.14|ENSG00000173145|chr10:94346540-94346540|A/-|frameshift_variant;NOC3L|p.T423Hfs*5|1|0.09|ENSG00000173145|chr10:94346547-94346547|T/-|frameshift_variant	136.26810882979174	0.012230845423532208	2				NaN	NaN	0	NaN	613	2305	2914
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2921	13.134	NaN	10634	30	0	2575.5	0.035			+	-1	KSCTIFLQ	8	57	498.76186817893614	995.5091834246723	2	498.7619934082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_KSC(Carbamidomethyl (C))TIFLQ_	REV__PPIH|p.F124L|1|0.17|ENSG00000171960|chr1:42666015-42666015|C/A|missense_variant	49.44154591367651	0.597725784090933	2				NaN	NaN	0	NaN	614	2305	2914
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2931	13.156	NaN	32771	30	0	7553.3	0.214	+			39483	STFGGHKSEK	10	83	539.2707807431378	1076.5270085530756	2	539.27001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STFGGHKSEK_	ABL1|p.R785Gfs*3|2|0.3|ENSG00000097007|chr9:130884637-130884637|C/-|frameshift_variant;ENSG00000097007|ENST00000318560|ABL1;nc|ENSG00000097007|P00519-2|ABL1	157.3448221729694	0.007191409758142479	2				NaN	NaN	0	NaN	621	2308	2930
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2932	13.159	NaN	25284	30	0	3891.5	0.106	+			35455	SASSATQVHK	10	87	508.2623270156752	1014.5101010981505	2	508.26165771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SASSATQVHK_	ENST00000361272.8_2_8:17102747-17104366:-|nuORF	178.54223333438978	0.001383121265579864	2				NaN	NaN	0	NaN	622	2308	2930
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2933	13.161	NaN	8678.8	30	0	2307	0.106	+			19713	KDSVKKSVE	9	67	510.29043334030666	1018.5663137474133	2	510.2900695800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KDSVKKSVE_	ENST00000415681.1_1_6:55804812-55805085:-|nuORF	58.22992032128504	0.22837015374068087	2				NaN	NaN	0	NaN	623	2308	2930
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2934	13.163	NaN	13207	30	0	3083.5	0.106				-1	ESKSPFPMY	9	61	551.2485438786475	1100.482534824095	2	551.2492065429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_ESKSPFPM(Oxidation (M))Y_	ENSG00000072364|ENST00000265343|AFF4	29.14955571784316	0.5308295550522326	2				NaN	NaN	0	NaN	624	2308	2930
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2935	13.165	NaN	18793	30	0	3040.4	0.106	+			3989	ATAVAHCKR	9	94	478.757887360597	955.501221787994	2	478.7582092285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATAVAHCKR_	chr19:39435705-39435848|468|276.17|0.0|24.72|-|0|RPS16,RPS16|1;ENSG00000105193|ENST00000251453|RPS16;ENST00000601390.1_1_19:39926180-39926535:-|nuORF	72.87924865735499	0.12833875048249987	2				NaN	NaN	0	NaN	625	2308	2930
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2936	13.167	NaN	6856.4	30	0	1181.5	0.106	+			31083	QFHNKSDVL	9	57	544.2822520731052	1086.5499512130102	2	544.2822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QFHNKSDVL_	tr|U7T2Q1|U7T2Q1_FUSNUGeneralsecretionpathwayproteinDOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00785PE=3SV=1	40.05817265558897	0.419577045485086	2				NaN	NaN	0	NaN	626	2308	2930
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2937	13.168	NaN	3704.4	30	0	1161.9	0.034	+			32140	QSMQELTE	8	41	483.2168525522138	964.4191521712277	2	483.2167663574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QSMQELTE_	tr|U7ST05|U7ST05_FUSNUhistidinekinaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01663PE=4SV=1	25.450171626174864	0.7628259754767981	2				NaN	NaN	0	NaN	627	2308	2930
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2948	13.194	NaN	109900	30	0	22192	0.182			+	20859	KIMEQFDE	8	66	520.2415771418424	1038.4686013504847	2	520.2415771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KIMEQFDE_	REV__ENSG00000150054|ENST00000683449|MPP7;REV__ENST00000496637.6_1_10:28342996-28348461:-|nuORF	53.351449002276354	0.5676011784961348	2				NaN	NaN	0	NaN	635	2311	2947
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2949	13.197	NaN	76672	30	0	23670	0.106	+			35457	SASSATQVHK	10	80	339.1769887702081	1014.5091369108243	3	339.17724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SASSATQVHK_	ENST00000361272.8_2_8:17102747-17104366:-|nuORF	50.033510581677724	0.4566913063131936	2				NaN	NaN	0	NaN	636	2311	2947
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2950	13.199	NaN	113620	30	0	71094	0.106	+			4850	ATPKKTVPK	9	72	323.8744495962834	968.6015193890503	3	323.8746643066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATPKKTVPK_	ENSG00000166197|ENST00000605788|NOLC1;nc|ENSG00000166197|Q14978-3|NOLC1	40.77816245573522	0.41113185337114944	2				NaN	NaN	0	NaN	637	2311	2947
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2951	13.2	NaN	67108	30	0	13379	0.106				-1	EPNALMMEE	9	70	540.2210225161086	1078.4274920990172	2	540.2205810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_EPNALM(Oxidation (M))MEE_	ENSG00000018189|ENST00000381006|RUFY3;nc|ENSG00000018189|Q7L099-2|RUFY3;nc|ENSG00000018189|Q7L099-4|RUFY3;nc|ENSG00000018189|Q7L099|RUFY3	40.77816245573522	0.41113185337114944	2				NaN	NaN	0	NaN	638	2311	2947
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2952	13.202	NaN	34718	30	0	8252.6	0.106				-1	ESCCFYANQ	9	59	561.204175981548	1120.393799029896	2	561.2047119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_ESC(Carbamidomethyl (C))CFYANQ_	nc|ENSG807|P61550|ERVS71-1	21.9598887501803	0.5980208138527809	2				NaN	NaN	0	NaN	639	2311	2947
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2953	13.204	NaN	46220	30	0	9253	0.106			+	9995	ERLGDPDEM	9	69	531.2308625386065	1060.447172144013	2	531.2310180664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ERLGDPDEM_	REV__nc|ENSG00000135409|Q16671-3|AMHR2	44.116797842482775	0.37197099687881774	2				NaN	NaN	0	NaN	640	2311	2947
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2954	13.206	NaN	26738	30	0	4267.9	0.036			+	-1	KQTFESCPG	9	70	527.2367892169701	1052.4590255007402	2	527.2369384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_KQTFESC(Carbamidomethyl (C))PG_	REV__ENST00000495272.5_1_1:95705378-95709907:+|nuORF	42.396135135203025	0.392153681582562	2				NaN	NaN	0	NaN	641	2311	2947
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2966	13.231	NaN	45233	30	0	10594	0.214	+			5606	AVCGKVKCK	9	82	525.2839738173345	1048.553394701469	2	525.2841186523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_AVC(Carbamidomethyl (C))GKVKC(Carbamidomethyl (C))K_	ENSG00000135317|ENST00000314673|SNX14;ENST00000508980.5_1_6:86270935-86284080:-|nuORF;nc|ENSG00000135317|Q9Y5W7-2|SNX14;nc|ENSG00000135317|Q9Y5W7-3|SNX14;nc|ENSG00000135317|Q9Y5W7-4|SNX14;SNX14|p.F173Lfs*5|3|0.42|ENSG00000135317|chr6:85565362-85565362|A/-|frameshift_variant	111.64827973302667	0.027316110422332632	2				NaN	NaN	0	NaN	650	2314	2965
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2967	13.235	NaN	30682	30	0	4018.6	0.106	+			47681	VSDTNQHVK	9	85	514.262578286008	1026.5106036388158	2	514.2626342773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSDTNQHVK_	ENSG00000137713|ENST00000527614|PPP2R1B;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;nc|ENSG00000137713|P30154-2|PPP2R1B;nc|ENSG00000137713|P30154-3|PPP2R1B;nc|ENSG00000137713|P30154-5|PPP2R1B	154.1183686248401	0.005909203230691971	2				NaN	NaN	0	NaN	651	2314	2965
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2968	13.237	NaN	18474	30	0	4870.4	0.106	+			34112	RSRPPQPR	8	56	497.28785096329005	992.5611489933801	2	497.28765869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RSRPPQPR_	ENST00000272647.9_1_2:128641813-128643454:-|nuORF	39.252832667884924	0.6609488554722044	2				NaN	NaN	0	NaN	652	2314	2965
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2969	13.239	NaN	8469.7	30	0	4469.9	0.106	+			6129	AVQAYVSALQ	10	39	350.52437681956286	1048.5513010588886	3	350.5248107910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVQAYVSALQ_	ENSG00000147162|ENST00000373719|OGT;ENST00000488174.5_1_X:70752999-70764494:+|nuORF;nc|ENSG00000147162|O15294-3|OGT	35.15202426646627	0.5927656479315102	2				NaN	NaN	0	NaN	653	2314	2965
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2970	13.241	NaN	13153	30	0	2239.9	0.106			+	-1	LCMRTDGPC	9	65	534.7186474188218	1067.4227419044435	2	534.7183227539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C),Oxidation (M)	_LCM(Oxidation (M))RTDGPC(Carbamidomethyl (C))_	REV__ENST00000396720.7_1_19:48205914-48206013:+|nuORF	32.81241826257853	0.4965981579233955	2				NaN	NaN	0	NaN	654	2314	2965
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2971	13.242	NaN	15853	30	0	2338.5	0.106			+	-1	CSMLCLMMSC	10	52	569.2021215701704	1136.3896902071408	2	569.2023315429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_CSMLCLMM(Oxidation (M))SC_	REV__ENST00000468090.5_1_21:45178713-45178851:+|nuORF	21.9598887501803	0.7004979571547932	2				NaN	NaN	0	NaN	655	2314	2965
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2972	13.244	NaN	7622.1	30	0	1787.1	0.035	+			3209	ASKPKVPPK	9	57	317.87081437145247	950.5906137145574	3	317.8709411621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASKPKVPPK_	ENSG00000133858|ENST00000378743|ZFC3H1;nc|ENSG00000133858|O60293-2|ZFC3H1;ZFC3H1|p.E1034Dfs*26|1|0.04|ENSG00000133858|chr12:71632230-71632231|-/AATAAAAATACTG|frameshift_variant;ZFC3H1|p.L1048*|1|0.18|ENSG00000133858|chr12:71632189-71632189|A/-|frameshift_variant;ZFC3H1|p.L1693Ffs*10|1|0.1|ENSG00000133858|chr12:71619380-71619381|-/A|frameshift_variant	20.94693142431847	0.6074874384046576	2				NaN	NaN	0	NaN	656	2314	2965
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2983	13.269	NaN	25626	30	0	3012.8	0.214	+			40325	STSTTTHVTK	10	85	531.7751667460858	1061.5357805589715	2	531.775146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STSTTTHVTK_	ENSG00000088367|ENST00000338074|EPB41L1;nc|ENSG00000088367|Q9H4G0-2|EPB41L1;nc|ENSG00000088367|Q9H4G0-3|EPB41L1;nc|ENSG00000088367|Q9H4G0-4|EPB41L1	117.7056744995986	0.030570130731382417	2				NaN	NaN	0	NaN	664	2317	2982
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2984	13.273	NaN	49414	30	0	12631	0.106	+			32797	RATKPTVQK	9	102	343.545016998409	1027.613221595427	3	343.545166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RATKPTVQK_	ENST00000263196.11_1_22:19055732-19076988:-|nuORF	117.81106730687013	0.02252488733980868	2				NaN	NaN	0	NaN	665	2317	2982
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2985	13.275	NaN	36209	30	0	17246	0.106			+	-1	MFNIVVSKV	9	64	526.7937130855388	1051.5728732378775	2	526.7935180664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))FNIVVSKV_	REV__tr|U7T6S6|U7T6S6_FUSNUHMAdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00153PE=4SV=1	51.33545320467046	0.2872990594074956	2				NaN	NaN	0	NaN	666	2317	2982
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2986	13.277	NaN	14101	30	0	1331.1	0.106	+			1000	AEKKTKQTL	9	80	523.8139235481749	1045.6132941631497	2	523.8141479492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEKKTKQTL_	ENSG00000165525|ENST00000298310|NEMF;ENST00000556925.5_1_14:50285084-50295410:-|nuORF;ENST00000557380.5_1_14:50292586-50301128:-|nuORF;nc|ENSG00000165525|O60524-3|NEMF;nc|ENSG00000165525|O60524-4|NEMF;nc|ENSG00000165525|O60524-5|NEMF;NEMF|p.K641Rfs*9|1|0.15|ENSG00000165525|chr14:49802721-49802721|T/-|frameshift_variant;NEMF|p.M879*|1|0.12|ENSG00000165525|chr14:49789558-49789558|T/-|frameshift_variant;NEMF|p.M879Nfs*10|1|0.13|ENSG00000165525|chr14:49789557-49789558|-/T|frameshift_variant	150.36159442982594	0.006784847064083231	2				NaN	NaN	0	NaN	667	2317	2982
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2987	13.278	NaN	14454	30	0	1935.2	0.106	+			47659	VSDANQHVK	9	76	499.25611138003853	NaN	0	499.256591796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSDANQHVK_	ENSG00000105568|ENST00000322088|PPP2R1A	167.22876102047192	0.012859988807432898	2				NaN	NaN	0	NaN	668	2317	2982
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2988	13.28	NaN	16071	30	0	3995.7	0.106				-1	LCKKNGIHT	9	65	535.7920878560906	1069.569622778981	2	535.7928466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_LC(Carbamidomethyl (C))KKNGIHT_	tr|U7T613|U7T613_FUSNUPyruvateformate-lyase-activatingenzymeOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00053PE=3SV=1	29.14955571784316	0.5308295550522326	2				NaN	NaN	0	NaN	669	2317	2982
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	2989	13.282	NaN	13329	30	0	1871.5	0.037	+			32173	QSSASCHSIKP	11	63	572.7745216620839	1143.5344903909677	2	572.7743530273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QSSASCHSIKP_	ENSG00000141449|ENST00000424526|GREB1L;ENST00000578368.5_1_18:18963479-19048745:+|nuORF;ENST00000584446.5_1_18:18963479-19034595:+|nuORF;GREB1L|p.G1039Qfs*16|1|0.06|ENSG00000141449|chr18:21495754-21495755|GG/-|frameshift_variant;GREB1L|p.T1038Kfs*19|1|0.06|ENSG00000141449|chr18:21495751-21495752|-/AACT|frameshift_variant;nc|ENSG00000141449|Q9C091-3|GREB1L;nc|ENSG00000141449|Q9C091-4|GREB1L	28.081489160057373	0.6952392775027776	2				NaN	NaN	0	NaN	670	2317	2982
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3001	13.308	NaN	31345	30	0	7285.3	0.214	+			31779	QPILFTSSMS	10	74	563.7747378062894	1125.5349226793787	2	563.775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_QPILFTSSM(Oxidation (M))S_	EVI2B|p.T35I|1|0.04|ENSG00000185862|chr17:31305506-31305506|G/A|missense_variant	45.97224482568171	0.49411383603842696	2				NaN	NaN	0	NaN	679	2320	3000
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3002	13.312	NaN	30911	30	0	5980.2	0.106			+	-1	KMDLFEGANC	10	67	592.7566671780943	1183.4987814229885	2	592.7572631835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_KMDLFEGANC(Carbamidomethyl (C))_	REV__CELSR2-KIAA1324|1|fusion;REV__ENSG00000116299|ENST00000369939|ELAPOR1;REV__ENST00000490758.6_1_1:109656894-109730836:+|nuORF;REV__ENST00000527996.5_1_1:109656894-109745573:+|nuORF;REV__nc|ENSG00000116299|Q6UXG2-2|ELAPOR1;REV__nc|ENSG00000116299|Q6UXG2-3|ELAPOR1;REV__nc|ENSG00000116299|Q6UXG2-4|ELAPOR1	23.52269567125451	0.6877354443478558	2				NaN	NaN	0	NaN	680	2320	3000
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3003	13.314	NaN	21436	30	0	11031	0.106				-1	IMGRGMARGQ	10	58	546.7741359956331	1091.533719058066	2	546.7730102539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_IMGRGM(Oxidation (M))ARGQ_	ENST00000421004.3_1_5:77655523-77656042:-|nuORF	35.61828744233558	0.588957954432594	2				NaN	NaN	0	NaN	681	2320	3000
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3004	13.315	NaN	25094	30	0	5895.1	0.106	+			22270	KTATLHCTVT	10	73	537.7834836168913	1073.5524143005825	2	537.7839965820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTATLHCTVT_	ENSG00000089012|ENST00000303415|SIRPG;nc|ENSG00000089012|Q9P1W8-2|SIRPG;nc|ENSG00000089012|Q9P1W8-3|SIRPG;nc|ENSG00000089012|Q9P1W8-4|SIRPG;SIRPG|p.V150Wfs*15|1|0.31|ENSG00000089012|chr20:1636489-1636489|G/-|frameshift_variant	47.657333605630114	0.47858658696240314	2				NaN	NaN	0	NaN	682	2320	3000
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3005	13.317	NaN	23446	30	0	5975.5	0.106			+	4746	ATMPRPTQ	8	71	459.229070621077	916.4435883089541	2	459.2290344238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_ATM(Oxidation (M))PRPTQ_	REV__CNTNAP1|p.R1226Q|1|0.22|ENSG00000108797|chr17:42697662-42697662|G/A|missense_variant	111.64827973302667	0.24425243057279236	2				NaN	NaN	0	NaN	683	2320	3000
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3006	13.319	NaN	13513	30	0	6330.7	0.106	+			36942	SILLDTLYE	9	46	533.7881873271925	1065.561821721185	2	533.788330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SILLDTLYE_	ENSG00000171060|ENST00000304519|C8orf74	29.14955571784316	0.5308295550522326	2				NaN	NaN	0	NaN	684	2320	3000
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3007	13.321	NaN	20718	30	0	6956.6	0.037	+			10558	EYCPPWRSP	9	65	567.7570761331143	1133.4995993330285	2	567.7567749023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EYCPPWRSP_	ENSG00000176909|ENST00000318083|MAMSTR;MAMSTR|p.H163Tfs*9|1|0.21|ENSG00000176909|chr19:48714848-48714849|-/G|frameshift_variant;MAMSTR|p.S341Pfs*39|1|0.29|ENSG00000176909|chr19:48713495-48713495|G/-|frameshift_variant	25.57405402267927	0.5642445186134241	2				NaN	NaN	0	NaN	685	2320	3000
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3017	13.344	NaN	9883.3	30	0	1238.1	0.214			+	43068	TELLNETVT	9	69	340.51360430171485	1018.5189835053445	3	340.5137634277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TELLNETVT_	REV__ENSG00000176177|ENST00000325157|ENTHD1	49.44154591367651	0.3095138337212152	2				NaN	NaN	0	NaN	692	2323	3016
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3018	13.348	NaN	10543	30	0	3570.9	0.106				-1	CWCRAIVK	8	54	546.7741359956331	1091.533719058066	2	547.2743530273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))WC(Carbamidomethyl (C))RAIVK_	ENSG00000173809|ENST00000639142|TDRD12;nc|ENSG00000173809|Q587J7-2|TDRD12;nc|ENSG00000173809|Q587J7|TDRD12	26.79610172149135	0.7524337208463756	2				NaN	NaN	0	NaN	693	2323	3016
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3019	13.35	NaN	11376	30	0	1285	0.106			+	39779	STKQSFSDQ	9	76	514.2360556903258	1026.4575584474514	2	514.2362670898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STKQSFSDQ_	REV__ENST00000304449.5_2_X:118725002-118725137:-|nuORF	63.53385203322761	0.18415635464017938	2				NaN	NaN	0	NaN	694	2323	3016
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3020	13.352	NaN	9296.3	30	0	1586.8	0.106	+			38062	SPSAPWRDQ	9	59	522.2473651512364	1042.4801773692727	2	522.2472534179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SPSAPWRDQ_	nc|ENSG00000139537|Q8IXS2-2|CCDC65	35.61828744233558	0.47037581924408073	2				NaN	NaN	0	NaN	695	2323	3016
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3021	13.353	NaN	5693.2	30	0	1209.3	0.106	+			41758	SVSNLKHSK	9	68	500.2823486328125	NaN	0	500.2823486328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVSNLKHSK_	CEP57L1|p.F288Lfs*3|1|0.37|ENSG00000183137|chr6:109159307-109159307|T/-|frameshift_variant;CEP57L1|p.N421Ifs*7|1|0.13|ENSG00000183137|chr6:109162844-109162844|A/-|frameshift_variant;ENSG00000183137|ENST00000517392|CEP57L1;nc|ENSG00000183137|Q8IYX8-2|CEP57L1	44.377184641726394	0.24544280798894275	2				NaN	NaN	0	NaN	696	2323	3016
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3022	13.355	NaN	2960.4	30	0	1199.9	0.106	+			29823	PKPKKAKDA	9	49	328.2061462402344	NaN	0	328.2061462402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PKPKKAKDA_	ENSG00000113356|ENST00000651687|POLR3G	17.364965105453717	0.37820932774828947	2				NaN	NaN	0	NaN	697	2323	3016
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3023	13.357	NaN	3992	30	0	1829.6	0.036			+	31834	QPRLVSLIK	9	44	351.89721285048415	1052.6698091516525	3	351.8973388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QPRLVSLIK_	REV__ARHGEF18-MAPKAP1|1|fusion	37.81151784470057	0.4459294069877048	2				NaN	NaN	0	NaN	698	2323	3016
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3034	13.383	NaN	13901	30	0	2297.3	0.214	+			5501	AVAEASKER	9	76	480.75886170903084	959.5031704848617	2	480.75872802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVAEASKER_	CDC42BPB|p.L928Ffs*26|1|0.05|ENSG00000198752|chr14:102963098-102963099|-/A|frameshift_variant;CDC42BPB|p.N918Tfs*5|1|0.27|ENSG00000198752|chr14:102963129-102963129|T/-|frameshift_variant;CDC42BPB|p.Q1073Rfs*38|2|0.31|ENSG00000198752|chr14:102950558-102950558|G/-|frameshift_variant;ENSG00000198752|ENST00000361246|CDC42BPB	76.16968421966216	0.11411088698345859	2				NaN	NaN	0	NaN	706	2326	3033
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3035	13.387	NaN	23362	30	0	2298	0.106	+			5141	ATSVAAARK	9	88	437.7588021280954	873.5030513229908	2	437.7585144042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATSVAAARK_	chr20:45814470-45815390|467|14.73|0.65|4.5|+|ENST00000335046|UBE2C,UBE2C;chr20:45814470-45815854|444|10.08|0.42|4.6|+|ENST00000405520|UBE2C,UBE2C;chr20:45815540-45815854|455|13.48|0.56|4.59|+|ENST00000617055|UBE2C,UBE2C;ENSG00000175063|ENST00000356455|UBE2C;nc|ENSG00000175063|O00762-3|UBE2C;nc|ENSG00000175063|O00762-4|UBE2C	127.46168284122857	0.016682644177004526	2				NaN	NaN	0	NaN	707	2326	3033
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3036	13.389	NaN	8061.4	30	0	912.37	0.106			+	41623	SVQQTVQAL	9	69	487.26915847537833	972.5237640175567	2	487.26904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVQQTVQAL_	REV__ENST00000596586.5_3_19:46283105-46288963:-|nuORF	93.1432384553994	0.056003526918089595	2				NaN	NaN	0	NaN	708	2326	3033
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3037	13.39	NaN	11413	30	0	1124	0.106	+			1542	AGDCARHQRE	10	75	600.2730146269902	1198.5314763207803	2	600.2733154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_AGDC(Carbamidomethyl (C))ARHQRE_	ENST00000428275.1_1_X:53172386-53172590:-|nuORF	79.71258880314673	0.19796908725841375	2				NaN	NaN	0	NaN	709	2326	3033
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3038	13.392	NaN	26742	30	0	3584.7	0.106	+			10132	ESQHQTREQ	9	79	571.7625756639545	1141.510598394709	2	571.7626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ESQHQTREQ_	ENSG00000204614|ENST00000396581|TRIM40	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	710	2326	3033
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3039	13.394	NaN	8037.3	30	0	1566.9	0.106	+			4212	ATGAAGSRRRA	11	63	537.3011303122079	1072.5877076912157	2	537.30126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATGAAGSRRRA_	ENST00000503811.5_1_5:138629500-138629704:+|nuORF	45.02220120713402	0.4892240028381124	2				NaN	NaN	0	NaN	711	2326	3033
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3040	13.396	NaN	12265	30	0	2573.2	0.038	+			48279	VTDPETHKSTK	11	82	621.8196339905866	1241.624715047973	2	621.8196411132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VTDPETHKSTK_	ENSG00000089327|ENST00000392219|FXYD5;ENST00000591716.6_1_19:35651643-35657154:+|nuORF	114.71003974875822	0.030349694290893875	2				NaN	NaN	0	NaN	712	2326	3033
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3051	13.422	NaN	23760	30	0	3925.6	0.214	+			40275	STSQQHLTK	9	76	515.2699906044186	NaN	0	515.27001953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STSQQHLTK_	ENSG00000111266|ENST00000298573|DUSP16	209.1949250693894	2.683617327356559E-06	2				NaN	NaN	0	NaN	720	2329	3050
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3052	13.425	NaN	23803	30	0	9058.1	0.106			+	8665	EDSVSQQSATD	11	66	583.7425699890366	1165.4705870448731	2	583.7423706054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EDSVSQQSATD_	REV__ENSG00000135749|ENST00000258229|PCNX2;REV__ENST00000344698.6_2_1:233120052-233120277:-|nuORF;REV__ENST00000462762.1_1_1:233120052-233121280:-|nuORF;REV__nc|ENSG00000135749|A6NKB5-4|PCNX2	37.50817390946774	0.5920388381045607	2				NaN	NaN	0	NaN	721	2329	3050
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3053	13.427	NaN	3044.3	30	0	445.11	0.106	+			45769	VAGAATPKK	9	49	421.75863658896066	841.5027202447213	2	421.7581787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VAGAATPKK_	ENSG00000124575|ENST00000244534|H1-3	60.11826168202944	0.21262886028301267	2				NaN	NaN	0	NaN	722	2329	3050
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3054	13.429	NaN	3634.3	30	0	1101.5	0.106	+			34971	SAAPAHSPR	9	52	447.23297338941256	892.4513938456251	2	447.2329406738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SAAPAHSPR_	ENST00000376499.7_2_9:84303220-84303679:-|nuORF	42.396135135203025	0.392153681582562	2				NaN	NaN	0	NaN	723	2329	3050
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3055	13.431	NaN	12179	30	0	2752.1	0.106			+	19261	KAEFLKTLC	9	52	526.7937130855388	1051.5728732378775	2	527.2496337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KAEFLKTLC_	REV__ENST00000290650.8_1_15:43250282-43256162:-|nuORF	39.252832667884924	0.4290233611298554	2				NaN	NaN	0	NaN	724	2329	3050
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3056	13.433	NaN	4247.3	30	0	608.06	0.106	+			13256	GIPKLVADF	9	52	480.2817811559141	958.5490093786282	2	480.297607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GIPKLVADF_	ENSG00000196616|ENST00000305046|ADH1B;nc|ENSG00000196616|P00325-2|ADH1B	26.79610172149135	0.5528238334041078	2				NaN	NaN	0	NaN	725	2329	3050
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3057	13.435	NaN	5042.2	30	0	1339.6	0.039				-1	SLLLGGCLLHC	11	47	414.8825774272656	1241.6259028819968	3	414.88232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C)	_SLLLGGC(Carbamidomethyl (C))LLHC(Carbamidomethyl (C))_	nc|ENSG00000177300|Q8N7P3|CLDN22	46.45678178249821	0.46959456050452836	2				NaN	NaN	0	NaN	726	2329	3050
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3069	13.461	NaN	346620	30	0	49315	0.146	+			39666	STIGETSKK	9	95	475.7610903669271	949.5076278006542	2	475.7610168457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STIGETSKK_	ENSG00000100461|ENST00000359890|RBM23;ENST00000554955.5_1_14:23375339-23380602:-|nuORF;ENST00000557667.5_1_14:23373372-23380602:-|nuORF;nc|ENSG00000100461|Q86U06-3|RBM23	146.78539889680295	0.007618400906539062	2				NaN	NaN	0	NaN	735	2332	3068
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3070	13.463	NaN	72888	30	0	20642	0.106				-1	 	0	54	487.74034072461137	973.4661285160228	2	487.7401123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	736	2332	3068
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3071	13.465	NaN	39955	30	0	6700.2	0.106			+	9060	EGGGPSCAGKE	11	69	524.7219831570959	1047.4294133809917	2	524.721923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_EGGGPSC(Carbamidomethyl (C))AGKE_	REV__ENST00000327111.7_1_5:92919776-92920418:+|nuORF	42.86426827375447	0.5187511139693657	2				NaN	NaN	0	NaN	737	2332	3068
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3072	13.467	NaN	12874	30	0	1783.4	0.106			+	20330	KEREKELEK	9	72	594.832712742921	1187.6508725526419	2	594.8326416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEREKELEK_	REV__DSP|p.Y787Lfs*2|1|0.17|ENSG00000096696|chr6:7574715-7574716|-/T|frameshift_variant;REV__ENSG00000096696|ENST00000379802|DSP;REV__nc|ENSG00000096696|P15924-2|DSP;REV__nc|ENSG00000096696|P15924-3|DSP	88.17693792209575	0.07000514020414955	2				NaN	NaN	0	NaN	738	2332	3068
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3073	13.469	NaN	19182	30	0	6367.5	0.106				-1	DRPHCCPD	8	45	528.70346558248	1055.39237823176	2	528.7034912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C)	_DRPHC(Carbamidomethyl (C))C(Carbamidomethyl (C))PD_	ENSG00000205903|ENST00000382252|ZNF316	25.450171626174864	0.7628259754767981	2				NaN	NaN	0	NaN	739	2332	3068
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3074	13.471	NaN	16944	30	0	4670.3	0.106			+	36989	SIPEFYDE	8	52	500.21986154990117	998.4251701666024	2	500.21978759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SIPEFYDE_	REV__ENSG00000164944|ENST00000297591|VIRMA;REV__nc|ENSG00000164944|Q69YN4-2|VIRMA;REV__nc|ENSG00000164944|Q69YN4-3|VIRMA;REV__nc|ENSG00000164944|Q69YN4-4|VIRMA	47.91560031466742	0.6071945918984287	2				NaN	NaN	0	NaN	740	2332	3068
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3075	13.472	NaN	11074	30	0	2970.1	0.035				-1	LLGFYCCL	8	53	494.7349395932443	987.4553262532886	2	494.73455810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_LLGFYC(Carbamidomethyl (C))CL_	ENST00000524666.5_1_11:65113686-65113899:+|nuORF	24.504012794735996	0.7701314986472447	2				NaN	NaN	0	NaN	741	2332	3068
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3076	13.473	NaN	8063.4	30	0	1488.9	0.14	+			16627	HHCCHLSGQ	9	52	511.20938711950936	1020.4042213058187	2	511.7906799316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_HHCCHLSGQ_	ENST00000340305.9_1_1:9662349-9662721:+|nuORF	24.20275056022122	0.577060078256802	2				NaN	NaN	0	NaN	742	2332	3068
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3084	13.494	NaN	17334	30	0	3950.7	0.214	+			13776	GQGVNHAADQ	10	46	498.7297285692226	995.4449042052452	2	498.72967529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GQGVNHAADQ_	ENSG00000189001|ENST00000452271|SBSN;nc|ENSG00000189001|Q6UWP8-2|SBSN;SBSN|p.L494H|1|0.56|ENSG00000189001|chr19:35526801-35526801|A/T|missense_variant	33.921630207806714	0.6028135429846169	2				NaN	NaN	0	NaN	747	2335	3083
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3085	13.497	NaN	19966	30	0	3446.6	0.106	+			29483	PCSGGPDRPE	10	63	507.72008615176725	1013.4256193703345	2	508.2216491699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PCSGGPDRPE_	nc|ENSG00000204682|Q5T4H9|MIR1915HG	35.61828744233558	0.588957954432594	2				NaN	NaN	0	NaN	748	2335	3083
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3086	13.499	NaN	11485	30	0	1550.7	0.106				-1	 	0	62	502.2174699478062	1002.4203869624124	2	502.21746826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	749	2335	3083
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3087	13.501	NaN	11065	30	0	2223.5	0.106			+	-1	GCGHSCSPNP	10	54	536.7014143815262	1071.3882758298523	2	536.70166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_GC(Carbamidomethyl (C))GHSC(Carbamidomethyl (C))SPNP_	REV__MER49_dup1305|chr21:41210187-41211078:+|1.209497246225798|0.4412608656295442|1.45|483.0|55|3|anti-sense	15.641811463095205	0.7369665665077569	2				NaN	NaN	0	NaN	750	2335	3083
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3088	13.503	NaN	10168	30	0	2389.7	0.106				-1	DADCEDIDC	9	58	556.6798943512289	1111.3452357692577	2	556.6801147460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C)	_DADC(Carbamidomethyl (C))EDIDC(Carbamidomethyl (C))_	ENSG00000122728|ENST00000242310|TAF1L;ENSG00000147133|ENST00000423759|TAF1;nc|ENSG00000147133|P21675-1|TAF1;nc|ENSG00000147133|P21675-13|TAF1;nc|ENSG00000147133|P21675-15|TAF1;nc|ENSG00000147133|P21675-16|TAF1;nc|ENSG00000147133|P21675-17|TAF1;nc|ENSG00000147133|P21675-18|TAF1;nc|ENSG00000147133|P21675-19|TAF1;nc|ENSG00000147133|P21675-20|TAF1;nc|ENSG00000147133|P21675-21|TAF1;nc|ENSG00000147133|P21675-22|TAF1;nc|ENSG00000147133|P21675-23|TAF1;nc|ENSG00000147133|P21675-24|TAF1;nc|ENSG00000147133|P21675-25|TAF1;nc|ENSG00000147133|P21675|TAF1;TAF1|p.L1451Cfs*4|1|0.04|ENSG00000147133|chrX:71408121-71408125|CTAAT/-|frameshift_variant;TAF1L|p.A852Pfs*14|1|0.21|ENSG00000122728|chr9:32633027-32633027|T/-|frameshift_variant;TAF1L|p.E1124*|1|0.35|ENSG00000122728|chr9:32632210-32632211|-/A|frameshift_variant;TAF1L|p.F1231Lfs*20|1|0.42|ENSG00000122728|chr9:32631887-32631887|A/-|frameshift_variant;TAF1L|p.F683Lfs*27|1|0.39|ENSG00000122728|chr9:32633531-32633531|A/-|frameshift_variant;TAF1L|p.F928Lfs*13|1|0.25|ENSG00000122728|chr9:32632796-32632796|A/-|frameshift_variant;TAF1L|p.K665Rfs*4|2|0.06|ENSG00000122728|chr9:32633586-32633586|T/-|frameshift_variant	12.206847966760668	0.6112419832031292	2				NaN	NaN	0	NaN	751	2335	3083
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3089	13.505	NaN	10610	30	0	1220	0.106				-1	KMFGTKCHGCD	11	66	670.7807885582172	1339.5470241832343	2	670.7802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Carbamidomethyl (C)	_KMFGTKC(Carbamidomethyl (C))HGC(Carbamidomethyl (C))D_	ENSG00000196923|ENST00000355841|PDLIM7;ENST00000486828.6_1_5:176910647-176917003:-|nuORF;nc|ENSG00000196923|Q9NR12-2|PDLIM7	16.006774744331256	0.795539314609425	2				NaN	NaN	0	NaN	752	2335	3083
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3090	13.507	NaN	6101.6	30	0	1385.8	0.037			+	-1	ECCSPRCCT	9	51	586.701952361166	1171.389351789132	2	586.702880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	3 Carbamidomethyl (C)	_EC(Carbamidomethyl (C))C(Carbamidomethyl (C))SPRC(Carbamidomethyl (C))CT_	REV__CON__Q9BYQ8;REV__CON__Q9BYQ8;REV__ENSG00000212721|ENST00000391413|KRTAP4-11;REV__ENSG00000212722|ENST00000391415|KRTAP4-9;REV__ENSG00000212722|ENST00000391415|KRTAP4-9	16.473147378115264	0.6112419832031293	2				NaN	NaN	0	NaN	753	2335	3083
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3095	13.521	NaN	6564.6	30	0	1244.5	0.214	+			35456	SASSATQVHK	10	67	508.2623270156752	1014.5101010981505	2	508.26220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SASSATQVHK_	ENST00000361272.8_2_8:17102747-17104366:-|nuORF	88.1336951990783	0.14175885391278442	2				NaN	NaN	0	NaN	755	2338	3094
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3096	13.525	NaN	5766.3	30	0	800.99	0.106			+	32283	QTMIRYVPG	9	59	532.7800355238955	NaN	0	532.7800903320312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QTMIRYVPG_	REV__ENSG00000062524|ENST00000263800|LTK;REV__ENSG00000171094|ENST00000389048|ALK;REV__nc|ENSG00000062524|P29376-4|LTK;REV__nc|ENSG00000062524|P29376-5|LTK	57.81127852772723	0.15865383123342353	2				NaN	NaN	0	NaN	756	2338	3094
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3097	13.527	NaN	3611.5	30	0	772.49	0.106	+			48021	VSRIADSEK	9	50	502.7722045524398	1003.5298561716796	2	502.77203369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSRIADSEK_	ENSG00000134444|ENST00000644646|RELCH;ENST00000592479.5_1_18:59895775-59902130:+|nuORF;nc|ENSG00000134444|Q9P260-2|RELCH;nc|ENSG00000134444|Q9P260|RELCH	44.377184641726394	0.36891676396732553	2				NaN	NaN	0	NaN	757	2338	3094
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3098	13.528	NaN	2907.6	30	0	1056.2	0.106	+			7619	DKEVAFCL	8	24	462.72772369154825	923.4408944498965	2	462.7274475097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DKEVAFCL_	ENSG00000117215|ENST00000375105|PLA2G2D	10.184766708764876	0.7843118145031319	2				NaN	NaN	0	NaN	758	2338	3094
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3099	13.53	NaN	6071.3	30	0	986.28	0.106			+	-1	RCHYRRDGF	9	55	633.7980576434155	1265.581562353631	2	633.799560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_RC(Carbamidomethyl (C))HYRRDGF_	REV__ZHX3|p.S543G|1|0.34|ENSG00000174306|chr20:41203290-41203290|T/C|missense_variant	29.14955571784316	0.5308295550522326	2				NaN	NaN	0	NaN	759	2338	3094
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3100	13.532	NaN	5808	30	0	1031.8	0.106			+	47541	VQVLQVQVGQ	10	45	366.5483136644217	1096.6231115934652	3	366.54864501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VQVLQVQVGQ_	REV__ENST00000514463.1_1_3:126160334-126160817:-|nuORF	34.172542307311794	0.6007644933930345	2				NaN	NaN	0	NaN	760	2338	3094
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3101	13.534	NaN	5023.2	30	0	604.41	0.034			+	13363	GLAGKVERN	9	54	472.26968490764585	942.5248168820917	2	472.2694091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GLAGKVERN_	REV__ENSG00000238243|ENST00000360358|OR2W3	47.91560031466742	0.327412564698279	2				NaN	NaN	0	NaN	761	2338	3094
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3112	13.559	NaN	10469	30	0	2369.4	0.214			+	50295	WSIEQFHK	8	69	537.7707457710582	NaN	0	537.7704467773438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WSIEQFHK_	REV__ENSG00000146223|ENST00000493763|RPL7L1;REV__ENST00000397415.7_1_6:42848808-42854199:+|nuORF;REV__ENST00000469911.1_1_3:182328694-182329198:+|nuORF	62.107414245175825	1.7418937515398478	2				NaN	NaN	0	NaN	769	2341	3111
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3113	13.563	NaN	6587	30	0	1801.6	0.106	+			3699	ATAAKPVAAK	10	59	464.2846700967768	926.5547872603536	2	464.2843017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATAAKPVAAK_	COL6A3|p.A2956Lfs*45|1|0.33|ENSG00000163359|chr2:237336234-237336234|C/-|frameshift_variant;COL6A3|p.A2957Lfs*44|1|0.33|ENSG00000163359|chr2:237336232-237336232|A/-|frameshift_variant;COL6A3|p.G3016Vfs*19|1|0.34|ENSG00000163359|chr2:237334810-237334810|G/-|frameshift_variant;ENSG00000163359|ENST00000295550|COL6A3;ENST00000491769.1_1_2:238233419-238250825:-|nuORF;nc|ENSG00000163359|P12111-2|COL6A3;nc|ENSG00000163359|P12111-4|COL6A3	93.5975768576971	0.11047702954938905	2				NaN	NaN	0	NaN	770	2341	3111
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3114	13.565	NaN	9562	30	0	1013.6	0.106	+			44906	TVAEKAVKK	9	63	487.30558391416463	972.5966148951293	2	487.3054504394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVAEKAVKK_	ENSG00000101596|ENST00000320876|SMCHD1;ENST00000577300.1_1_18:2703698-2706469:+|nuORF;nc|ENSG00000101596|A6NHR9-2|SMCHD1;SMCHD1|p.D1006Kfs*40|1|0.32|ENSG00000101596|chr18:2729370-2729371|-/AA|frameshift_variant;SMCHD1|p.D1006Tfs*39|2|0.32|ENSG00000101596|chr18:2729371-2729371|A/-|frameshift_variant;SMCHD1|p.G727Rfs*21|1|0.3|ENSG00000101596|chr18:2707832-2707833|-/A|frameshift_variant;SMCHD1|p.M779Wfs*12|1|0.38|ENSG00000101596|chr18:2718226-2718226|A/-|frameshift_variant	85.86182877749512	0.07653218437724067	2				NaN	NaN	0	NaN	771	2341	3111
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3115	13.566	NaN	6670.8	30	0	1103.9	0.106	+			22673	KTYTKSSHLK	10	68	596.837722386885	1191.66089184057	2	596.837646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTYTKSSHLK_	ENSG00000127528|ENST00000248071|KLF2;ENSG00000136826|ENST00000374672|KLF4;ENST00000497048.5_1_9:110248034-110250560:-|nuORF;KLF4|p.D429Lfs*13|1|0.08|ENSG00000136826|chr9:107485905-107485906|TC/-|frameshift_variant;nc|ENSG00000136826|O43474-4|KLF4;nc|ENSG00000136826|O43474|KLF4	95.4829727501206	0.09968275784893506	2				NaN	NaN	0	NaN	772	2341	3111
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3116	13.568	NaN	4954.4	30	0	979.07	0.106	+			2866	ASAPPQEQK	9	57	478.24593844187973	954.4773239505595	2	478.2449951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASAPPQEQK_	ENSG00000070756|ENST00000318607|PABPC1;nc|ENSG00000070756|P11940-2|PABPC1	47.95952297671804	0.32689736945648856	2				NaN	NaN	0	NaN	773	2341	3111
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3117	13.57	NaN	6123	30	0	1328.5	0.106	+			22915	KVPDQKGTPK	10	62	549.3196119373978	1096.6246709415955	2	549.3199462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KVPDQKGTPK_	ENSG00000177570|ENST00000314727|SAMD12	49.536043120802724	0.461275219792494	2				NaN	NaN	0	NaN	774	2341	3111
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3118	13.572	NaN	3951	30	0	1417.2	0.036	+			23119	KVVTVHLEK	9	44	351.55340202795605	1051.6383766840681	3	351.5533447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KVVTVHLEK_	ENSG00000090273|ENST00000321265|NUDC;ENST00000437039.1_1_2:179319678-179320041:+|nuORF	23.04248740728303	0.5879033540491928	2				NaN	NaN	0	NaN	775	2341	3111
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3125	13.59	NaN	15654	30	0	6253	0.214			+	43419	TGKKNNETSPG	11	62	378.19117005347795	1131.5516807606339	3	378.1914978027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TGKKNNETSPG_	REV__ENST00000318887.7_1_3:88199027-88199249:+|nuORF	55.08391021199286	0.3673379875553588	2				NaN	NaN	0	NaN	779	2344	3124
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3126	13.594	NaN	17974	30	0	5383.2	0.106			+	-1	KSAMWGSPRP	10	80	566.7835474325758	1131.5525419319515	2	566.7843017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_KSAM(Oxidation (M))WGSPRP_	REV__ENST00000496953.1_1_3:60676058-60676130:-|nuORF	75.04331003522576	0.23611669241777622	2				NaN	NaN	0	NaN	780	2344	3124
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3127	13.596	NaN	5442.4	30	0	917.25	0.106			+	21977	KSELAKTKK	9	63	516.8244661814651	1031.6343794297302	2	516.8244018554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KSELAKTKK_	REV__ENST00000589950.1_1_17:43228245-43238834:-|nuORF	46.45678178249821	0.34452392205506005	2				NaN	NaN	0	NaN	781	2344	3124
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3128	13.597	NaN	5353.5	30	0	2962.3	0.106	+			15602	GVIRAHKKA	9	34	327.20997899775733	978.608107593472	3	327.2101745605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GVIRAHKKA_	ENSG00000161036|ENST00000292616|LRWD1;ENST00000473880.5_1_7:102109277-102110330:+|nuORF;LRWD1|p.L446Cfs*61|1|0.2|ENSG00000161036|chr7:102469772-102469772|C/-|frameshift_variant	18.324413293986947	0.6112419832031293	2				NaN	NaN	0	NaN	782	2344	3124
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3129	13.599	NaN	7775.8	30	0	1916.1	0.106			+	35395	SAQIRSSPNTE	11	71	595.2944225732657	1188.5742922133313	2	595.2946166992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SAQIRSSPNTE_	REV__ENST00000322315.5_1_19:3590178-3593283:+|nuORF	59.26467630326872	0.33001889715770233	2				NaN	NaN	0	NaN	783	2344	3124
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3130	13.601	NaN	5999.3	30	0	1303.1	0.106			+	21743	KQMKCNKKQ	9	69	604.8180251493678	1207.6214973655356	2	604.8175048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),Oxidation (M)	_KQM(Oxidation (M))KC(Carbamidomethyl (C))NKKQ_	REV__CNTLN|p.I1388Nfs*3|1|0.3|ENSG00000044459|chr9:17502587-17502588|-/A|frameshift_variant;REV__CNTLN|p.K1130Rfs*14|1|0.25|ENSG00000044459|chr9:17462996-17462996|A/-|frameshift_variant;REV__CNTLN|p.M1308*|1|0.36|ENSG00000044459|chr9:17484355-17484355|A/-|frameshift_variant;REV__CNTLN|p.M1308Nfs*9|1|0.46|ENSG00000044459|chr9:17484354-17484355|-/A|frameshift_variant;REV__CNTLN|p.T1324Dfs*27|1|0.14|ENSG00000044459|chr9:17484406-17484407|-/A|frameshift_variant;REV__ENSG00000044459|ENST00000380647|CNTLN;REV__nc|ENSG00000044459|Q9NXG0|CNTLN	87.75429964447693	0.0711966946989736	2				NaN	NaN	0	NaN	784	2344	3124
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3131	13.603	NaN	4356.7	30	0	930.16	0.035			+	-1	LCKQAHLK	8	48	499.28485107421875	NaN	0	499.28485107421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_LC(Carbamidomethyl (C))KQAHLK_	REV__ENSG00000203867|ENST00000369519|RBM20;REV__RBM20|p.A1208Gfs*3|1|0.41|ENSG00000203867|chr10:110835911-110835912|-/G|frameshift_variant;REV__RBM20|p.H797Ifs*113|1|0.28|ENSG00000203867|chr10:110812782-110812782|C/-|frameshift_variant;REV__RBM20|p.L538Gfs*12|1|0.05|ENSG00000203867|chr10:110797590-110797591|-/TGGCTAT|frameshift_variant;REV__RBM20|p.N1096Tfs*8|1|0.27|ENSG00000203867|chr10:110821903-110821903|A/-|frameshift_variant	26.79610172149135	1.7418937515398478	2				NaN	NaN	0	NaN	785	2344	3124
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3144	13.63	NaN	16045	30	0	3516.8	0.214	+			2881	ASASKGLEK	9	80	445.7506367149401	889.4867204966802	2	445.75042724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASASKGLEK_	ENSG00000101294|ENST00000398174|HM13;ENST00000335574.9_2_20:30154038-30157019:+|nuORF;ENST00000460389.5_1_20:30136650-30157019:+|nuORF;ENST00000487281.1_1_20:30155508-30157019:+|nuORF;ENST00000492709.5_1_20:30132820-30157019:+|nuORF;nc|ENSG00000101294|Q8TCT9-5|HM13;nc|ENSG00000101294|Q8TCT9|HM13	163.1509380574825	0.003936019289634439	2				NaN	NaN	0	NaN	795	2347	3143
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3145	13.634	NaN	3750.6	30	0	573.97	0.106	+			32903	RDSIELTK	8	60	481.2690362721734	NaN	0	481.26898193359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RDSIELTK_	CEP126|p.L630Tfs*5|1|0.5|ENSG00000110318|chr11:101962916-101962917|-/A|frameshift_variant;CEP126|p.L933Yfs*21|1|0.42|ENSG00000110318|chr11:101963829-101963829|C/-|frameshift_variant;ENSG00000110318|ENST00000263468|CEP126	52.936696900407355	1.7418937515398478	2				NaN	NaN	0	NaN	796	2347	3143
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3146	13.636	NaN	3152.2	30	0	1065.4	0.106			+	-1	NGRMILHE	8	39	493.2487157128126	NaN	0	493.24835205078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_NGRM(Oxidation (M))ILHE_	REV__ENST00000503752.5_1_4:185578328-185580527:+|nuORF;REV__ENST00000509538.5_1_4:185578328-185578478:+|nuORF	19.359975847455235	1.7418937515398478	2				NaN	NaN	0	NaN	797	2347	3143
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3147	13.637	NaN	6182.5	30	0	1423.5	0.106	+			48245	VTDDSPPSKK	10	72	537.2761985647487	1072.5378441962973	2	537.2771606445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTDDSPPSKK_	ENSG00000065526|ENST00000375759|SPEN;SPEN|p.A2105Lfs*33|1|0.46|ENSG00000065526|chr1:15932548-15932548|G/-|frameshift_variant;SPEN|p.A2251Qfs*102|3|0.29|ENSG00000065526|chr1:15932985-15932985|C/-|frameshift_variant;SPEN|p.G1860Efs*9|1|0.33|ENSG00000065526|chr1:15931816-15931816|G/-|frameshift_variant;SPEN|p.N2053Tfs*11|1|0.43|ENSG00000065526|chr1:15932394-15932394|A/-|frameshift_variant;SPEN|p.P2055Lfs*9|1|0.32|ENSG00000065526|chr1:15932399-15932399|C/-|frameshift_variant	59.93077597824379	0.36646980200755325	2				NaN	NaN	0	NaN	798	2347	3143
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3148	13.639	NaN	4613.3	30	0	988.96	0.106	+			13846	GQTPKVAKQEK	11	70	607.3489379882812	NaN	0	607.3489379882812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GQTPKVAKQEK_	ENSG00000149806|ENST00000529639|FAU	82.83050618871818	0.06837965047298598	2				NaN	NaN	0	NaN	799	2347	3143
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3149	13.641	NaN	4041.1	30	0	550.93	0.106	+			48941	VVEKPQPKK	9	59	526.8271361275239	1051.6397193218477	2	526.8272705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VVEKPQPKK_	ENSG00000197622|ENST00000357235|CDC42SE1	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	800	2347	3143
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3150	13.643	NaN	3205.3	30	0	441.34	0.036			+	32192	QSTSASSADNI	11	55	540.743747555417	1079.472942177634	2	540.7806396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QSTSASSADNI_	REV__ENST00000510345.2_1_4:111337808-111338090:+|nuORF	53.59686742100583	0.38061189074210516	2				NaN	NaN	0	NaN	801	2347	3143
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3163	13.671	NaN	18894	30	0	3094.9	0.214	+			42602	TATAVAHCK	9	80	479.7421756555828	957.4697983779656	2	479.7419738769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_TATAVAHC(Carbamidomethyl (C))K_	chr19:39435705-39435848|468|276.17|0.0|24.72|-|0|RPS16,RPS16|1;ENSG00000105193|ENST00000251453|RPS16;ENST00000601390.1_1_19:39926180-39926535:-|nuORF	143.8867514904718	0.008656634767784652	2				NaN	NaN	0	NaN	811	2350	3162
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3164	13.674	NaN	27112	30	0	4934.2	0.106	+			5377	ATYETKESK	9	71	528.7642028143123	1055.5138526954245	2	528.7642822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATYETKESK_	ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65623404-65625570:-|nuORF;nc|ENSG00000165410|Q9Y281-3|CFL2	146.78539889680295	0.007618400906539062	2				NaN	NaN	0	NaN	812	2350	3162
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3165	13.676	NaN	4198.9	30	0	338.31	0.106			+	24667	LGVQGRANK	9	73	471.77723527867687	NaN	0	471.7772216796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LGVQGRANK_	REV__ENSG00000071051|ENST00000233154|NCK2	71.29570347882199	0.10120983364817086	2				NaN	NaN	0	NaN	813	2350	3162
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3166	13.678	NaN	7894.6	30	0	2130.4	0.106	+			22261	KTATAVAHCK	10	80	515.2790369530777	1028.5435209729553	2	515.279052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTATAVAHCK_	chr19:39435705-39435848|468|276.17|0.0|24.72|-|0|RPS16,RPS16|1;ENSG00000105193|ENST00000251453|RPS16;ENST00000601390.1_1_19:39926180-39926535:-|nuORF	82.49433358170734	0.17524247213410465	2				NaN	NaN	0	NaN	814	2350	3162
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3167	13.68	NaN	4072.2	30	0	938.55	0.106	+			229	AAMEETHQK	9	55	522.7429447607757	NaN	0	522.7430419921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AAMEETHQK_	ENSG00000133030|ENST00000651222|MPRIP;nc|ENSG00000133030|Q6WCQ1-2|MPRIP;nc|ENSG00000133030|Q6WCQ1-3|MPRIP;nc|ENSG00000133030|Q6WCQ1|MPRIP	69.6276240434122	0.10825701912424071	2				NaN	NaN	0	NaN	815	2350	3162
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3168	13.682	NaN	2061.6	30	0	531.72	0.106			+	48845	VVAVQSVGQCY	11	39	384.8611569196245	1151.5616413590735	3	384.8611755371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VVAVQSVGQCY_	REV__nc|ENSG00000276717|A8MTI9|PRSS47P	41.080066990542036	0.5431644350485484	2				NaN	NaN	0	NaN	816	2350	3162
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3169	13.683	NaN	3904.6	30	0	732.56	0.039				-1	CFWMETATMK	10	33	632.263179692695	1262.5118064521898	2	632.2640380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_CFWM(Oxidation (M))ETATMK_	ENST00000553724.1_1_14:104193947-104195573:+|nuORF	20.94693142431847	0.7087701759873708	2				NaN	NaN	0	NaN	817	2350	3162
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3181	13.71	NaN	31537	30	0	5336.3	0.214	+			6423	AVVSGVHKK	9	75	462.7850846829467	923.5556164326935	2	462.78472900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVVSGVHKK_	ACTR3B-JMJD1C|1|fusion;ENSG00000171988|ENST00000399262|JMJD1C;nc|ENSG00000171988|Q15652-3|JMJD1C	110.11987700582712	0.028875675806141952	2				NaN	NaN	0	NaN	826	2353	3180
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3182	13.713	NaN	42076	30	0	11956	0.106			+	8609	ECLRCIEQS	9	60	540.743747555417	1079.472942177634	2	540.7438354492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ECLRCIEQS_	REV__ACSF3|p.G87E|1|0.25|ENSG00000176715|chr16:89100941-89100941|G/A|missense_variant	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	827	2353	3180
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3183	13.715	NaN	18694	30	0	2388.9	0.106	+			36742	SGYEVHHQK	9	68	542.762576010827	1083.510599088454	2	542.7626342773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SGYEVHHQK_	ENSG00000142192|ENST00000346798|APP;nc|ENSG00000142192|P05067-10|APP;nc|ENSG00000142192|P05067-11|APP;nc|ENSG00000142192|P05067-3|APP;nc|ENSG00000142192|P05067-4|APP;nc|ENSG00000142192|P05067-5|APP;nc|ENSG00000142192|P05067-6|APP;nc|ENSG00000142192|P05067-7|APP;nc|ENSG00000142192|P05067-8|APP;nc|ENSG00000142192|P05067-9|APP	104.0567914643314	0.03506238181059741	2				NaN	NaN	0	NaN	828	2353	3180
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3184	13.717	NaN	41072	30	0	5014.7	0.106	+			20066	KEKEQAKQL	9	76	551.3168812012141	1100.619209469228	2	551.3173217773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEKEQAKQL_	ENSG00000110844|ENST00000548825|PRPF40B;ENSG00000196504|ENST00000545856|PRPF40A;nc|ENSG00000110844|Q6NWY9-2|PRPF40B;nc|ENSG00000110844|Q6NWY9-3|PRPF40B;nc|ENSG00000110844|Q6NWY9|PRPF40B;nc|ENSG00000196504|O75400-2|PRPF40A;nc|ENSG00000196504|O75400-3|PRPF40A;nc|ENSG00000196504|O75400|PRPF40A	182.3913890336628	0.0010559746847940753	2				NaN	NaN	0	NaN	829	2353	3180
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3185	13.719	NaN	20734	30	0	7524.5	0.106			+	7938	DSKEDSDASNS	11	66	577.7248989986202	1153.4352450640404	2	577.7249145507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DSKEDSDASNS_	REV__ENSG00000133107|ENST00000379705|TRPC4;REV__ENST00000426868.6_1_13:38211042-38213329:-|nuORF;REV__nc|ENSG00000133107|Q9UBN4-2|TRPC4;REV__nc|ENSG00000133107|Q9UBN4-4|TRPC4;REV__nc|ENSG00000133107|Q9UBN4-5|TRPC4;REV__nc|ENSG00000133107|Q9UBN4-6|TRPC4;REV__TRPC4|p.F797Lfs*3|1|0.6|ENSG00000133107|chr13:37637446-37637446|A/-|frameshift_variant	16.71738777980365	0.7922119881075679	2				NaN	NaN	0	NaN	830	2353	3180
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3186	13.721	NaN	30711	30	0	17551	0.106	+			8808	EEKVRIAEK	9	69	367.8801252553941	1100.6185463663824	3	367.88031005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EEKVRIAEK_	CAPZA2|p.A18E|1|0.12|ENSG00000198898|chr7:116888140-116888140|C/A|missense_variant	80.45461616416974	0.09558281504443908	2				NaN	NaN	0	NaN	831	2353	3180
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3187	13.723	NaN	18856	30	0	5617.7	0.037	+			28919	NQYYTNCSAG	10	71	560.7218301784682	1119.4291074237362	2	560.7217407226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NQYYTNCSAG_	CACNA1G|p.E1556Rfs*15|1|0.23|ENSG00000006283|chr17:50607978-50607978|G/-|frameshift_variant;CACNA1G|p.E2317Rfs*47|1|0.22|ENSG00000006283|chr17:50626559-50626559|C/-|frameshift_variant;CACNA1G|p.G548Wfs*31|1|0.08|ENSG00000006283|chr17:50576035-50576036|-/C|frameshift_variant;CACNA1G|p.P2298Afs*13|1|0.4|ENSG00000006283|chr17:50626502-50626503|-/G|frameshift_variant;CACNA1G|p.R516Gfs*48|1|0.26|ENSG00000006283|chr17:50575943-50575943|C/-|frameshift_variant;ENSG00000006283|ENST00000359106|CACNA1G;nc|ENSG00000006283|O43497-10|CACNA1G;nc|ENSG00000006283|O43497-11|CACNA1G;nc|ENSG00000006283|O43497-12|CACNA1G;nc|ENSG00000006283|O43497-13|CACNA1G;nc|ENSG00000006283|O43497-15|CACNA1G;nc|ENSG00000006283|O43497-16|CACNA1G;nc|ENSG00000006283|O43497-17|CACNA1G;nc|ENSG00000006283|O43497-18|CACNA1G;nc|ENSG00000006283|O43497-19|CACNA1G;nc|ENSG00000006283|O43497-2|CACNA1G;nc|ENSG00000006283|O43497-20|CACNA1G;nc|ENSG00000006283|O43497-21|CACNA1G;nc|ENSG00000006283|O43497-22|CACNA1G;nc|ENSG00000006283|O43497-23|CACNA1G;nc|ENSG00000006283|O43497-24|CACNA1G;nc|ENSG00000006283|O43497-25|CACNA1G;nc|ENSG00000006283|O43497-26|CACNA1G;nc|ENSG00000006283|O43497-27|CACNA1G;nc|ENSG00000006283|O43497-28|CACNA1G;nc|ENSG00000006283|O43497-29|CACNA1G;nc|ENSG00000006283|O43497-3|CACNA1G;nc|ENSG00000006283|O43497-30|CACNA1G;nc|ENSG00000006283|O43497-31|CACNA1G;nc|ENSG00000006283|O43497-32|CACNA1G;nc|ENSG00000006283|O43497-33|CACNA1G;nc|ENSG00000006283|O43497-34|CACNA1G;nc|ENSG00000006283|O43497-35|CACNA1G;nc|ENSG00000006283|O43497-36|CACNA1G;nc|ENSG00000006283|O43497-4|CACNA1G;nc|ENSG00000006283|O43497-5|CACNA1G;nc|ENSG00000006283|O43497-6|CACNA1G;nc|ENSG00000006283|O43497-7|CACNA1G;nc|ENSG00000006283|O43497-8|CACNA1G;nc|ENSG00000006283|O43497-9|CACNA1G	36.446750945000026	0.5818864909973037	2				NaN	NaN	0	NaN	832	2353	3180
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3199	13.749	NaN	39710	30	0	12466	0.214				-1	 	0	62	471.2536066477029	940.4926603622058	2	471.2533264160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	841	2356	3198
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3200	13.752	NaN	26240	30	0	4200.4	0.106			+	40389	STVAGAKK	8	82	381.2294140939803	760.4442752547607	2	381.22943115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STVAGAKK_	REV__ENSG00000111110|ENST00000228705|PPM1H;REV__PPM1H|p.T227Hfs*30|2|0.16|ENSG00000111110|chr12:62801894-62801894|G/-|frameshift_variant	79.45101966838831	0.3281480470254892	2				NaN	NaN	0	NaN	842	2356	3198
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3201	13.754	NaN	19192	30	0	3644.2	0.106	+			6131	AVQDKGSIHK	10	68	541.8017101388491	1081.588867344498	2	541.8017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVQDKGSIHK_	ENSG00000178035|ENST00000326739|IMPDH2;ENST00000466147.5_1_3:49062090-49062580:-|nuORF;ENST00000484872.1_1_3:49061926-49062670:-|nuORF	104.01359247289065	0.06577755598965461	2				NaN	NaN	0	NaN	843	2356	3198
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3202	13.756	NaN	18092	30	0	2269.5	0.106	+			22944	KVQGSCEGAH	10	63	508.23491928662077	1014.4552856400416	2	508.2349853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KVQGSCEGAH_	ENSG00000129226|ENST00000250092|CD68;ENST00000581621.1_1_17:7483060-7484826:+|nuORF;nc|ENSG00000129226|P34810-2|CD68;nc|ENSG00000129226|P34810-3|CD68	58.78195531508484	0.37691818691852547	2				NaN	NaN	0	NaN	844	2356	3198
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3203	13.758	NaN	15256	30	0	3615.6	0.106			+	9745	ENEFDLEQ	8	60	512.2165428210783	1022.4185327089566	2	512.2164306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ENEFDLEQ_	REV__ENSG00000173137|ENST00000308860|ADCK5;REV__ENST00000529654.5_1_8:145615920-145616956:+|nuORF	36.446750945000026	0.6783611724927969	2				NaN	NaN	0	NaN	845	2356	3198
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3204	13.76	NaN	9695.6	30	0	1848.9	0.106			+	-1	SKGKTRPTK	9	67	522.8119179376043	1043.6092829420086	2	522.81201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SKGKTRPTK_	REV__ENST00000510724.1_1_5:145849275-145850204:+|nuORF	44.377184641726394	0.36891676396732553	2				NaN	NaN	0	NaN	846	2356	3198
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3205	13.761	NaN	8534	30	0	1657	0.034	+			13685	GPKGNSGEPGA	11	62	485.73086240831884	NaN	0	485.7308654785156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GPKGNSGEPGA_	COL1A1|p.G1181Afs*58|1|0.37|ENSG00000108821|chr17:50186914-50186914|G/-|frameshift_variant;COL1A1|p.G809Afs*299|2|0.43|ENSG00000108821|chr17:50190354-50190354|G/-|frameshift_variant;COL1A1|p.P622Lfs*144|1|0.2|ENSG00000108821|chr17:50192807-50192807|G/-|frameshift_variant;ENSG00000108821|ENST00000225964|COL1A1	47.95952297671804	0.32997419910078585	2				NaN	NaN	0	NaN	847	2356	3198
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3216	13.787	NaN	19783	30	0	3065.9	0.214	+			22229	KSYDQVHSGK	10	85	574.7887002051264	1147.5628474770526	2	574.7883911132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSYDQVHSGK_	ACOX1|p.N501Tfs*6|1|0.47|ENSG00000161533|chr17:75949577-75949577|T/-|frameshift_variant;ENSG00000161533|ENST00000293217|ACOX1;nc|ENSG00000161533|Q15067-3|ACOX1;nc|ENSG00000161533|Q15067|ACOX1	161.51181693189292	0.006384248322647003	2				NaN	NaN	0	NaN	855	2359	3215
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3217	13.79	NaN	10797	30	0	2276.2	0.106	+			5825	AVIGNNKQK	9	62	486.2852001163686	970.5558472995373	2	486.284912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVIGNNKQK_	ENSG00000114098|ENST00000469044|ARMC8;ENST00000463485.5_1_3:137940771-137947769:+|nuORF;nc|ENSG00000114098|Q8IUR7-2|ARMC8;nc|ENSG00000114098|Q8IUR7-3|ARMC8;nc|ENSG00000114098|Q8IUR7-6|ARMC8;nc|ENSG00000114098|Q8IUR7-7|ARMC8;nc|ENSG00000114098|Q8IUR7-8|ARMC8	143.01937276914788	0.00906355689373299	2				NaN	NaN	0	NaN	856	2359	3215
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3218	13.792	NaN	8672.8	30	0	2993.8	0.106			+	1466	AFHGWVLA	8	45	450.7402884818175	899.466024030435	2	450.7400207519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AFHGWVLA_	REV__ENST00000500337.6_1_5:43453974-43454076:-|nuORF	24.504012794735996	0.7701314986472447	2				NaN	NaN	0	NaN	857	2359	3215
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3219	13.794	NaN	19408	30	0	2339.3	0.106	+			3907	ATARPRPVK	9	66	332.54151668419524	994.6027206527858	3	332.541748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATARPRPVK_	ENSG00000170892|ENST00000396388|TSEN34	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	858	2359	3215
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3220	13.796	NaN	8443.3	30	0	2572.8	0.106			+	32133	QSLMMKKSA	9	58	512.2710390900166	1022.5275252468333	2	512.27099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QSLMMKKSA_	REV__ENSG00000139651|ENST00000416904|ZNF740;REV__ZNF740|p.T80Dfs*3|1|0.31|ENSG00000139651|chr12:53185457-53185458|-/A|frameshift_variant	41.42661286455405	0.403525789677298	2				NaN	NaN	0	NaN	859	2359	3215
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3221	13.798	NaN	7244.3	30	0	1310.5	0.106	+			20122	KEKLEITTR	9	73	559.3324916318865	1116.6504303305728	2	559.3326416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KEKLEITTR_	CCDC171|p.K55R|1|0.16|ENSG00000164989|chr9:15571746-15571746|A/G|missense_variant	58.22992032128504	0.22837015374068087	2				NaN	NaN	0	NaN	860	2359	3215
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3222	13.8	NaN	3705.5	30	0	1221.2	0.033	+			40424	STVHMHSS	8	30	443.1983630486522	884.3821731641044	2	443.1981201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STVHMHSS_	AIMP2|p.T154M|1|0.16|ENSG00000106305|chr7:6017932-6017932|C/T|missense_variant	18.324413293986947	0.7971860551947066	2				NaN	NaN	0	NaN	861	2359	3215
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3234	13.825	NaN	7413	30	0	716.91	0.214	+			41644	SVQTKAVNK	9	71	487.7850918896597	973.5556308461195	2	487.7847900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVQTKAVNK_	ENSG00000119285|ENST00000366582|HEATR1;HEATR1|p.H353Pfs*16|1|0.31|ENSG00000119285|chr1:236595572-236595573|-/G|frameshift_variant;HEATR1|p.M758Dfs*47|1|0.08|ENSG00000119285|chr1:236583167-236583168|-/G|frameshift_variant	132.757866228626	0.013877640931359021	2				NaN	NaN	0	NaN	870	2362	3233
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3235	13.829	NaN	5598.2	30	0	1749	0.106			+	11183	FGVPSAWKK	9	46	510.28877370410146	1018.5629944750029	2	510.2884216308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FGVPSAWKK_	REV__ENST00000513449.6_2_4:8465778-8469740:+|nuORF	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	871	2362	3233
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3236	13.831	NaN	12671	30	0	1009.3	0.106			+	43869	TMGKLVQPLMV	11	80	624.8380675995495	1247.661582265899	2	624.8385620117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Oxidation (M)	_TM(Oxidation (M))GKLVQPLM(Oxidation (M))V_	REV__ENSG00000116062|ENST00000234420|MSH6;REV__MSH6|p.F882Lfs*24|1|0.31|ENSG00000116062|chr2:47800626-47800626|T/-|frameshift_variant;REV__MSH6|p.G1105Wfs*3|2|0.25|ENSG00000116062|chr2:47803552-47803553|-/T|frameshift_variant;REV__nc|ENSG00000116062|P52701-2|MSH6;REV__nc|ENSG00000116062|P52701-3|MSH6;REV__nc|ENSG00000116062|P52701-4|MSH6	63.53385203322761	0.2919106290768168	2				NaN	NaN	0	NaN	872	2362	3233
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3237	13.832	NaN	2898.3	30	0	333.56	0.106				-1	RSQKPVMVK	9	49	363.5461137327836	1087.6165117985508	3	363.54638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_RSQKPVM(Oxidation (M))VK_	ENSG00000108107|ENST00000344063|RPL28;ENST00000412461.2_1_22:19043875-19044022:+|nuORF;ENST00000560583.5_1_19:55899571-55899697:+|nuORF	26.063383197487333	0.5596714774181829	2				NaN	NaN	0	NaN	873	2362	3233
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3238	13.834	NaN	3191.1	30	0	689.62	0.106	+			13345	GKSWAKVHLMF	11	43	435.2369088826524	1302.6888972481572	3	435.5709533691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GKSWAKVHLMF_	ENST00000425455.2_1_1:121244673-121244892:+|nuORF	30.568863376406313	0.6691487505135859	2				NaN	NaN	0	NaN	874	2362	3233
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3239	13.836	NaN	6483.6	30	0	1374.7	0.106				-1	GCSHLCLLAPG	11	42	564.2726857458498	NaN	0	564.27294921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_GC(Carbamidomethyl (C))SHLCLLAPG_	ENSG00000168702|ENST00000389484|LRP1B;LRP1B|p.C3762Lfs*2|1|0.32|ENSG00000168702|chr2:140358089-140358090|-/A|frameshift_variant;LRP1B|p.G4130Mfs*20|1|0.06|ENSG00000168702|chr2:140324019-140324020|-/AT|frameshift_variant;LRP1B|p.H4368Tfs*4|1|0.47|ENSG00000168702|chr2:140274465-140274465|C/-|frameshift_variant;LRP1B|p.N3434Tfs*84|1|0.47|ENSG00000168702|chr2:140442617-140442617|T/-|frameshift_variant;LRP1B|p.N4135Mfs*14|1|0.13|ENSG00000168702|chr2:140324003-140324003|T/-|frameshift_variant;LRP1B|p.R3957Kfs*11|2|0.15|ENSG00000168702|chr2:140350819-140350820|-/T|frameshift_variant	27.882242232435846	0.44115667141176046	2				NaN	NaN	0	NaN	875	2362	3233
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3240	13.838	NaN	3352.6	30	0	442.8	0.034			+	39787	STKTSNSLI	9	56	475.7610903669271	949.5076278006542	2	475.76123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STKTSNSLI_	REV__ENSG00000116138|ENST00000375847|DNAJC16;REV__ENST00000475133.5_1_1:15892828-15894669:+|nuORF;REV__nc|ENSG00000116138|Q9Y2G8-2|DNAJC16	30.503639358989545	0.5181749237905803	2				NaN	NaN	0	NaN	876	2362	3233
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3252	13.864	NaN	8585.8	30	0	1939.1	0.214	+			33506	RKMGSFKK	8	53	491.28730876659944	980.5600645999989	2	491.2872009277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RKMGSFKK_	ENSG00000182957|ENST00000382108|SPATA13;ENST00000466831.2_1_13:24796959-24798912:+|nuORF	44.116797842482775	0.6307669463330267	2				NaN	NaN	0	NaN	885	2365	3251
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3253	13.867	NaN	7600.7	30	0	2507.6	0.106	+			32275	QTMAANAQKNK	11	63	602.8088343271532	NaN	0	602.8088989257812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QTMAANAQKNK_	ENSG00000162368|ENST00000371873|CMPK1;ENST00000371870.3_1_1:47799617-47838812:+|nuORF;nc|ENSG00000162368|P30085-2|CMPK1;nc|ENSG00000162368|P30085|CMPK1	98.58198989935565	0.03663129328721323	2				NaN	NaN	0	NaN	886	2365	3251
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3254	13.869	NaN	4998.1	30	0	881.26	0.106	+			49042	VVICPEPPAK	10	55	555.3062112712415	1108.597869609283	2	555.3068237304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_VVIC(Carbamidomethyl (C))PEPPAK_	ENST00000600788.6_1_19:18118141-18118563:+|nuORF	44.116797842482775	0.5112108506279902	2				NaN	NaN	0	NaN	887	2365	3251
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3255	13.871	NaN	5364.4	30	0	926.77	0.106	+			21826	KRFEELQK	8	50	539.3065826271159	NaN	0	539.306640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KRFEELQK_	ENSG00000181192|ENST00000263035|DHTKD1	60.97194046774394	1.7418937515398478	2				NaN	NaN	0	NaN	888	2365	3251
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3256	13.873	NaN	4534.1	30	0	1079.5	0.106			+	16692	HKDECYIR	8	34	532.2508258147095	1062.487098696219	2	532.2512817382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HKDECYIR_	REV__IMPACT|p.Q230H|1|0.37|ENSG00000154059|chr18:24448114-24448114|G/T|missense_variant	26.69291269510374	0.7532304684939817	2				NaN	NaN	0	NaN	889	2365	3251
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3257	13.875	NaN	3770.5	30	0	2475.4	0.106				-1	 	0	28	433.73741819003396	865.460283446868	2	433.73712158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	890	2365	3251
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3258	13.877	NaN	3326.6	30	0	675.72	0.035				-1	 	0	40	328.877986188406	983.6121291654181	3	328.8782653808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	891	2365	3251
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3270	13.902	NaN	9511	30	0	2989.8	0.214	+			3366	ASNPVIKKK	9	69	492.8136459052118	983.6127388772236	2	492.8135986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASNPVIKKK_	nc|ENSG00000117650|P51955-4|NEK2	112.41091882917199	0.026537921851008135	2				NaN	NaN	0	NaN	900	2368	3269
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3271	13.906	NaN	7134.2	30	0	946.69	0.106	+			38158	SQAPVNKPK	9	62	484.7796330603624	967.5447131875248	2	484.7796630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SQAPVNKPK_	ENSG00000169925|ENST00000303407|BRD3;nc|ENSG00000169925|Q15059-2|BRD3	95.81516180277367	0.04847050768394289	2				NaN	NaN	0	NaN	901	2368	3269
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3272	13.908	NaN	3597.2	30	0	416.76	0.106	+			38756	SSLRASTSK	9	53	468.75919926435097	935.503845595502	2	468.7589111328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSLRASTSK_	ENSG00000137154|ENST00000380394|RPS6;ENST00000397390.3_1_9:19200348-19200429:-|nuORF;ENST00000498815.1_1_9:19376293-19376674:-|nuORF	104.01359247289065	0.03510646158778409	2				NaN	NaN	0	NaN	902	2368	3269
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3273	13.909	NaN	1874.8	30	0	369.46	0.106			+	3181	ASIVDSLLIP	10	40	343.2075146484641	NaN	0	343.2075500488281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASIVDSLLIP_	REV__ADGRE2|p.I749Rfs*49|1|0.1|ENSG00000127507|chr19:14743716-14743722|TGCAAGA/-|frameshift_variant;REV__ENSG00000127507|ENST00000315576|ADGRE2;REV__nc|ENSG00000127507|Q9UHX3-2|ADGRE2;REV__nc|ENSG00000127507|Q9UHX3-3|ADGRE2;REV__nc|ENSG00000127507|Q9UHX3-4|ADGRE2;REV__nc|ENSG00000127507|Q9UHX3-5|ADGRE2;REV__nc|ENSG00000127507|Q9UHX3-6|ADGRE2	23.52269567125451	0.42010282974921537	2				NaN	NaN	0	NaN	903	2368	3269
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3274	13.911	NaN	6659.7	30	0	1240.9	0.106			+	41656	SVRACRYLD	9	62	541.772903664532	1081.531254395864	2	542.773193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVRACRYLD_	REV__ENSG00000165792|ENST00000339374|METTL17;REV__ENST00000382985.8_1_14:21464725-21465046:+|nuORF;REV__ENST00000554849.1_1_14:21464355-21465046:+|nuORF	35.61828744233558	0.47037581924408073	2				NaN	NaN	0	NaN	904	2368	3269
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3275	13.913	NaN	4988.1	30	0	937.19	0.106	+			5378	ATYETKESK	9	59	528.7642028143123	1055.5138526954245	2	528.764892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATYETKESK_	ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65623404-65625570:-|nuORF;nc|ENSG00000165410|Q9Y281-3|CFL2	45.02220120713402	0.3613509778819777	2				NaN	NaN	0	NaN	905	2368	3269
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3276	13.915	NaN	3483.6	30	0	957.26	0.033	+			15172	GTSGPHVGK	9	42	420.22228333272216	838.4300137322443	2	420.2218933105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GTSGPHVGK_	ENSG00000111859|ENST00000379446|NEDD9;ENST00000448183.6_1_6:11200558-11306280:-|nuORF;nc|ENSG00000111859|Q14511-2|NEDD9;nc|ENSG00000111859|Q14511-3|NEDD9;NEDD9|p.P245Lfs*3|2|0.37|ENSG00000111859|chr6:11191135-11191135|G/-|frameshift_variant	104.74654710444128	0.034358562718640136	2				NaN	NaN	0	NaN	906	2368	3269
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3289	13.942	NaN	11576	30	0	5581	0.214	+			25658	LRAFFVEE	8	54	505.76968294041825	NaN	0	505.7698669433594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LRAFFVEE_	ENSG00000168159|ENST00000305943|RNF187	30.503639358989545	1.7418937515398478	2				NaN	NaN	0	NaN	916	2371	3288
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3290	13.946	NaN	4227.4	30	0	1272.3	0.106	+			22223	KSVSTYRK	8	43	323.5221369180896	967.5445813544688	3	323.5223388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KSVSTYRK_	tr|U7STL9|U7STL9_FUSNUMORNrepeatproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01108PE=4SV=1	31.954861631926434	0.7126016770032289	2				NaN	NaN	0	NaN	917	2371	3288
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3291	13.948	NaN	8886.8	30	0	2275.4	0.106			+	16766	HMTNKNASYF	10	61	606.7743954679747	NaN	0	606.8693237304688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HMTNKNASYF_	REV__ENST00000495160.2_3_3:57234031-57260394:-|nuORF	45.97224482568171	0.33106653400957564	2				NaN	NaN	0	NaN	918	2371	3288
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3292	13.95	NaN	8993.6	30	0	1608.4	0.106	+			21634	KPSLISQLEQ	10	61	571.8247587292276	1141.634964525255	2	571.8248901367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KPSLISQLEQ_	ENSG00000167785|ENST00000601372|ZNF558;ENST00000597304.5_1_19:8921959-8932201:-|nuORF;nc|ENSG00000167785|Q96NG5-2|ZNF558	40.05817265558897	0.5486090488315611	2				NaN	NaN	0	NaN	919	2371	3288
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3293	13.951	NaN	5643.9	30	0	1027.7	0.106			+	19633	KDKDMVVSA	9	58	496.75941786965484	991.5042828061097	2	496.75946044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KDKDMVVSA_	REV__ENSG00000149016|ENST00000476907|TUT1;REV__TUT1|p.A338Qfs*59|1|0.33|ENSG00000149016|chr11:62578709-62578709|C/-|frameshift_variant;REV__TUT1|p.F545Lfs*3|1|0.28|ENSG00000149016|chr11:62576084-62576084|A/-|frameshift_variant;REV__TUT1|p.G141Efs*13|1|0.11|ENSG00000149016|chr11:62581558-62581558|G/-|frameshift_variant	44.377184641726394	0.36891676396732553	2				NaN	NaN	0	NaN	920	2371	3288
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3294	13.953	NaN	7273.9	30	0	1491.3	0.036				-1	MKKIPSRCV	9	48	552.3065185546875	NaN	0	552.3065185546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))MKKIPSRCV_	ENST00000540093.2_2_12:2851859-2881072:-|nuORF	34.172542307311794	0.30503706118289736	2				NaN	NaN	0	NaN	921	2371	3288
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3295	13.954	NaN	2128.7	30	0	1095.2	0.14				-1	 	0	37	411.72449587916964	821.4344388251393	2	411.7243957519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	922	2371	3288
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3306	13.981	NaN	10981	30	0	2279.9	0.215	+			48366	VTHEGSTVEK	10	65	362.8522830481313	1085.535019744594	3	362.8524169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTHEGSTVEK_	nc|ENSG00000211675|P0CG04|IGLC1;nc|ENSG00000211677|P0DOY2|IGLC2;nc|ENSG00000211679|P0DOY3|IGLC3;nc|ENSG00000211685|A0M8Q6|IGLC7;nc|ENSG00000222037|P0CF74|IGLC6;nc|ENSG00000254709|B9A064|IGLL5	72.09557110113691	0.26019946548822415	2				NaN	NaN	0	NaN	930	2374	3305
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3307	13.984	NaN	9815.2	30	0	2192.1	0.106			+	9907	EQPMSIMFQ	9	51	555.7540097242883	1109.4934665153764	2	555.7544555664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EQPMSIMFQ_	REV__ENSG00000131848|ENST00000683990|ZSCAN5A;REV__ENSG00000197213|ENST00000586855|ZSCAN5B;REV__ENSG00000204532|ENST00000534327|ZSCAN5C;REV__ENST00000592101.1_1_19:56735938-56736358:-|nuORF;REV__nc|ENSG00000267908|P0CG00|ZSCAN5DP	39.252832667884924	0.4290233611298554	2				NaN	NaN	0	NaN	931	2374	3305
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3308	13.986	NaN	9260.6	30	0	2000.8	0.106				-1	KECSMDPCPS	10	80	577.2219132296444	NaN	0	577.3160400390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_KECSMDPC(Carbamidomethyl (C))PS_	ADAMTSL3|p.F1172Yfs*20|1|0.12|ENSG00000156218|chr15:83983142-83983143|-/A|frameshift_variant;ADAMTSL3|p.F477*|1|0.29|ENSG00000156218|chr15:83892848-83892849|TG/-|frameshift_variant;ADAMTSL3|p.H1300Ifs*18|1|0.33|ENSG00000156218|chr15:83991138-83991138|C/-|frameshift_variant;ADAMTSL3|p.N1166Kfs*26|1|0.4|ENSG00000156218|chr15:83983119-83983120|-/A|frameshift_variant;ADAMTSL3|p.R1207Gfs*32|1|0.3|ENSG00000156218|chr15:83983243-83983243|A/-|frameshift_variant;ENSG00000156218|ENST00000286744|ADAMTSL3;ENST00000561483.5_1_15:84323016-84694242:+|nuORF;nc|ENSG00000156218|P82987-2|ADAMTSL3	47.657333605630114	0.3204131577145918	2				NaN	NaN	0	NaN	932	2374	3305
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3309	13.988	NaN	4002.3	30	0	1067.5	0.106			+	47685	VSDYTFDR	8	53	501.72852200966145	1001.4424910861229	2	501.728759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSDYTFDR_	REV__ENSG00000257335|ENST00000475668|MGAM;REV__nc|ENSG00000257335|O43451-1|MGAM	30.503639358989545	0.7238069182250283	2				NaN	NaN	0	NaN	933	2374	3305
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3310	13.99	NaN	4964.2	30	0	852.51	0.106			+	11697	FRQHDGYI	8	61	518.2519697002069	NaN	0	518.2503662109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FRQHDGYI_	REV__ENSG00000154930|ENST00000323482|ACSS1;REV__nc|ENSG00000154930|Q9NUB1-2|ACSS1;REV__nc|ENSG00000154930|Q9NUB1-3|ACSS1;REV__nc|ENSG00000154930|Q9NUB1-4|ACSS1	47.91560031466742	1.7418937515398478	2				NaN	NaN	0	NaN	934	2374	3305
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3311	13.992	NaN	4581.1	30	0	914.61	0.106			+	30713	QDGKLNNQV	9	61	508.2623270156752	1014.5101010981505	2	508.2621154785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QDGKLNNQV_	REV__ENSG00000177694|ENST00000454872|NAALADL2	40.05817265558897	0.419577045485086	2				NaN	NaN	0	NaN	935	2374	3305
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3312	13.993	NaN	3407.2	30	0	582.71	0.034			+	3377	ASPQGAVTPQ	10	48	478.24593844187973	954.4773239505595	2	478.24578857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASPQGAVTPQ_	REV__ENSG00000054356|ENST00000295718|PTPRN;REV__ENST00000462351.5_1_2:220160899-220172331:-|nuORF;REV__nc|ENSG00000054356|Q16849-2|PTPRN;REV__nc|ENSG00000054356|Q16849-3|PTPRN;REV__PTPRN|p.S677Pfs*18|1|0.2|ENSG00000054356|chr2:219297293-219297293|C/-|frameshift_variant	42.86426827375447	0.522752283233888	2				NaN	NaN	0	NaN	936	2374	3305
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3326	14.023	NaN	48855	30	0	4029.8	0.214	+			34240	RTGKVTVEK	9	111	339.8731548287733	NaN	0	339.8731689453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTGKVTVEK_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	63.42647028704847	0.13470499157941143	2				NaN	NaN	0	NaN	947	2377	3325
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3327	14.026	NaN	31608	30	0	19999	0.106			+	850	AEGQLVPAEK	10	56	521.2846909241357	1040.5548289150713	2	521.2854614257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEGQLVPAEK_	REV__ENSG00000148357|ENST00000683500|HMCN2;REV__HMCN2|p.P4784Qfs*22|1|0.32|ENSG00000148357|chr9:130430363-130430363|C/-|frameshift_variant;REV__nc|ENSG00000148357|Q8NDA2-1|HMCN2;REV__nc|ENSG00000148357|Q8NDA2-4|HMCN2	47.95952297671804	0.47580206326914537	2				NaN	NaN	0	NaN	948	2377	3325
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3328	14.028	NaN	18779	30	0	3674.4	0.106	+			4170	ATFHGSTTHTK	11	73	594.2940215346689	NaN	0	594.2939453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATFHGSTTHTK_	ENSG00000205277|ENST00000536621|MUC12;nc|ENSG00000205277|Q9UKN1|MUC12	68.84614121027924	0.1478820782847342	2				NaN	NaN	0	NaN	949	2377	3325
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3329	14.03	NaN	12950	30	0	8834.8	0.106				-1	 	0	42	432.2011950470906	862.3878371609812	2	432.200927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	950	2377	3325
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3330	14.032	NaN	15079	30	0	5000	0.106			+	33494	RKFQCAKK	8	63	504.79269596572533	1007.5708389982507	2	504.7928161621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RKFQCAKK_	REV__ENSG00000101892|ENST00000218008|ATP1B4;REV__nc|ENSG00000101892|Q9UN42-2|ATP1B4	40.5726180659479	0.6527593143185008	2				NaN	NaN	0	NaN	951	2377	3325
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3331	14.034	NaN	5431.4	30	0	663.24	0.036	+			34263	RTHQQAPLK	9	60	360.20846031673284	1077.6035515503986	3	360.2085266113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RTHQQAPLK_	ENST00000540497.5_3_20:45938819-45938885:-|nuORF	80.45461616416974	0.09558281504443908	2				NaN	NaN	0	NaN	952	2377	3325
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3332	14.034	NaN	10336	30	0	1997.3	0.141				-1	QDMMGQLRE	9	59	562.2478380286873	NaN	0	562.2483520507812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_QDM(Oxidation (M))MGQLRE_	CON__Q9H552;ENST00000409686.2_1_9:102067468-102068890:+|nuORF	24.519189625965996	0.35377483217337163	2				NaN	NaN	0	NaN	953	2377	3325
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3348	14.07	NaN	26410	30	0	3420	0.214	+			40334	STTASLSKK	9	82	461.7638001521606	921.5130473711213	2	461.763427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STTASLSKK_	ENSG00000143363|ENST00000271620|PRUNE1;nc|ENSG00000143363|Q86TP1-2|PRUNE1;nc|ENSG00000143363|Q86TP1-3|PRUNE1;nc|ENSG00000143363|Q86TP1-4|PRUNE1;nc|ENSG00000143363|Q86TP1-5|PRUNE1;nc|ENSG00000143363|Q86TP1-6|PRUNE1;nc|ENSG00000143363|Q86TP1-7|PRUNE1	104.01359247289065	0.03510646158778409	2				NaN	NaN	0	NaN	966	2380	3347
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3349	14.073	NaN	16895	30	0	3705.1	0.106	+			49293	VVQKKIAEK	9	78	521.8345439304138	1041.6545349276275	2	521.8345336914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVQKKIAEK_	ENSG00000171045|ENST00000524325|TSNARE1;ENST00000518928.1_1_8:143381726-143407541:-|nuORF;nc|ENSG00000171045|Q96NA8-2|TSNARE1	106.68306549817024	0.032382560583716295	2				NaN	NaN	0	NaN	967	2380	3347
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3350	14.075	NaN	17699	30	0	4706.6	0.106				-1	AVCSFRRV	8	63	332.1796976215221	993.5172634647663	3	332.17987060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_AVC(Carbamidomethyl (C))SFRRV_	ENSG00000196277|ENST00000357716|GRM7;GRM7|p.F809Lfs*21|1|0.35|ENSG00000196277|chr3:7579326-7579326|T/-|frameshift_variant;GRM7|p.K906Efs*6|1|0.11|ENSG00000196277|chr3:7740366-7740367|-/A|frameshift_variant;nc|ENSG00000196277|Q14831-2|GRM7;nc|ENSG00000196277|Q14831-3|GRM7;nc|ENSG00000196277|Q14831-4|GRM7;nc|ENSG00000196277|Q14831-5|GRM7	31.954861631926434	0.7126016770032289	2				NaN	NaN	0	NaN	968	2380	3347
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3351	14.077	NaN	36752	30	0	6033.7	0.106	+			16460	HETEQKRL	8	97	347.52064154641835	1039.540095239455	3	347.52081298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HETEQKRL_	ENSG00000139644|ENST00000267115|TMBIM6;ENST00000553022.1_1_12:50146843-50152319:+|nuORF;nc|ENSG00000139644|P55061-2|TMBIM6	55.50420428727701	0.5462892107279674	2				NaN	NaN	0	NaN	969	2380	3347
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3352	14.079	NaN	18841	30	0	1824.2	0.106	+			25830	LSDQTKEKE	9	74	539.2750220470293	1076.5354911608586	2	539.2752685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSDQTKEKE_	ENSG00000106028|ENST00000265304|SSBP1	190.2614974402762	0.00026591377982909756	2				NaN	NaN	0	NaN	970	2380	3347
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3353	14.081	NaN	16406	30	0	2441.7	0.036				-1	 	0	78	549.8260931887365	1097.637633444273	2	549.8533935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	971	2380	3347
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3354	14.081	NaN	14572	30	0	2811.9	0.14			+	8597	ECFVLLSAL	9	78	497.7658868810969	993.5172208289938	2	497.766357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ECFVLLSAL_	REV__ENSG00000197943|ENST00000564138|PLCG2	53.351449002276354	0.2690372970092375	2				NaN	NaN	0	NaN	972	2380	3347
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3366	14.109	NaN	22727	30	0	2445.6	0.214	+			38404	SSAASSLKK	9	78	439.7507086511795	877.486864369159	2	439.75048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSAASSLKK_	ARID1A|p.F2141Sfs*59|5|0.26|ENSG00000117713|chr1:26780313-26780313|C/-|frameshift_variant;ARID1A|p.K1161Sfs*19|1|0.29|ENSG00000117713|chr1:26772573-26772573|A/-|frameshift_variant;ARID1A|p.M1564Hfs*8|1|0.18|ENSG00000117713|chr1:26774910-26774911|-/C|frameshift_variant;ARID1A|p.N1475Tfs*6|1|0.36|ENSG00000117713|chr1:26774648-26774648|A/-|frameshift_variant;ARID1A|p.P1115Qfs*46|1|0.32|ENSG00000117713|chr1:26771260-26771260|C/-|frameshift_variant;ARID1A|p.P1326Rfs*155|1|0.15|ENSG00000117713|chr1:26773685-26773685|C/-|frameshift_variant;ARID1A|p.P1406Rfs*37|1|0.42|ENSG00000117713|chr1:26774444-26774448|CCCCA/-|frameshift_variant;ARID1A|p.P1568Lfs*44|1|0.14|ENSG00000117713|chr1:26774926-26774926|C/-|frameshift_variant;ARID1A|p.P1575Hfs*37|1|0.38|ENSG00000117713|chr1:26774947-26774947|C/-|frameshift_variant;ARID1A|p.P2114Rfs*21|1|0.46|ENSG00000117713|chr1:26780236-26780236|C/-|frameshift_variant;ARID1A|p.V2244Gfs*34|1|0.31|ENSG00000117713|chr1:26780626-26780627|-/G|frameshift_variant;ENSG00000049618|ENST00000636930|ARID1B;ENSG00000117713|ENST00000324856|ARID1A;nc|ENSG00000049618|Q8NFD5-1|ARID1B;nc|ENSG00000049618|Q8NFD5-2|ARID1B;nc|ENSG00000049618|Q8NFD5|ARID1B;nc|ENSG00000117713|O14497-2|ARID1A;nc|ENSG00000117713|O14497-3|ARID1A	141.52041321563706	0.009766778904176347	2				NaN	NaN	0	NaN	981	2383	3365
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3367	14.113	NaN	15461	30	0	1648.3	0.106	+			41443	SVNKASTVTK	10	79	517.7958645152822	1033.5771760973644	2	517.7958374023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVNKASTVTK_	ENSG00000039523|ENST00000042381|RIPOR1;ENST00000569733.6_1_16:67575293-67580037:+|nuORF;nc|ENSG00000039523|Q6ZS17-3|RIPOR1;nc|ENSG00000039523|Q6ZS17-4|RIPOR1;nc|ENSG00000039523|Q6ZS17|RIPOR1	128.51354385984777	0.015305610523191824	2				NaN	NaN	0	NaN	982	2383	3365
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3368	14.115	NaN	15066	30	0	1647.4	0.106	+			49217	VVNDAGRPK	9	80	478.26932525603115	NaN	0	478.269287109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVNDAGRPK_	ENSG00000109971|ENST00000534624|HSPA8;ENST00000508840.1_1_8:30095113-30095479:+|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;HSPA8|p.K569Dfs*6|1|0.3|ENSG00000109971|chr11:123058302-123058303|TC/-|frameshift_variant;nc|ENSG00000109971|P11142-2|HSPA8	90.60085204095205	0.040385177724871185	2				NaN	NaN	0	NaN	983	2383	3365
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3369	14.117	NaN	16556	30	0	5384.4	0.106			+	32697	RAGRDEGEPHQ	11	73	626.29503876084	1250.57552458848	2	626.2957153320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RAGRDEGEPHQ_	REV__ENST00000252242.8_1_12:52913550-52913679:-|nuORF	37.50817390946774	0.5920388381045607	2				NaN	NaN	0	NaN	984	2383	3365
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3370	14.118	NaN	7507.3	30	0	1004.5	0.106	+			49151	VVMGKQQSK	9	62	502.7810662359783	1003.5475795387566	2	502.7814025878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVMGKQQSK_	ENSG00000148225|ENST00000374193|WDR31;nc|ENSG00000148225|Q8NA23-2|WDR31	68.78682469695295	0.14603441672067394	2				NaN	NaN	0	NaN	985	2383	3365
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3371	14.12	NaN	6215.8	30	0	1427	0.106			+	30998	QESDGCAEV	9	45	469.18257966041296	936.3506063876259	2	469.1822509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QESDGCAEV_	REV__ENST00000403496.6_1_1:32700614-32705489:-|nuORF;REV__ENST00000423995.5_1_1:32700614-32700746:-|nuORF;REV__ENST00000426597.2_1_1:32700614-32705592:-|nuORF;REV__ENST00000441044.5_1_1:32700614-32705011:-|nuORF	35.61828744233558	0.47037581924408073	2				NaN	NaN	0	NaN	986	2383	3365
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3372	14.122	NaN	11933	30	0	2102.8	0.036	+			31146	QGGLSRGLCPA	11	61	529.7751708026257	1057.5357886720512	2	529.775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QGGLSRGLCPA_	ENST00000374676.4_1_1:22162006-22165376:-|nuORF	41.42661286455405	0.5384226294179143	2				NaN	NaN	0	NaN	987	2383	3365
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3385	14.149	NaN	12365	30	0	1757.6	0.214	+			2863	ASAPLHQNK	9	76	483.2616567104479	964.5087604876958	2	483.26141357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASAPLHQNK_	ENSG00000123178|ENST00000361840|SPRYD7	106.68306549817024	0.032382560583716295	2				NaN	NaN	0	NaN	997	2386	3384
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3386	14.153	NaN	5327.5	30	0	539.72	0.106	+			34908	SAAEAVKEK	9	61	466.75525719192814	NaN	0	466.7555847167969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAAEAVKEK_	ENSG00000096696|ENST00000379802|DSP;nc|ENSG00000096696|P15924-2|DSP;nc|ENSG00000096696|P15924-3|DSP	112.10723106719422	0.007794126129732805	2				NaN	NaN	0	NaN	998	2386	3384
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3387	14.155	NaN	4475.7	30	0	1407.4	0.106				-1	 	0	51	410.18818578545597	818.361818637712	2	410.18798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	999	2386	3384
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3388	14.157	NaN	8639.4	30	0	2942.3	0.106			+	-1	KRETCSGI	8	54	475.7415044302167	949.4684559272334	2	475.7408142089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_KRETC(Carbamidomethyl (C))SGI_	REV__ENST00000367142.4_1_1:205683958-205684057:-|nuORF	50.0245360154114	0.5941082100236891	2				NaN	NaN	0	NaN	1000	2386	3384
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3389	14.158	NaN	9180.6	30	0	1325.4	0.106			+	-1	LCPRPSLKK	9	70	549.8260931887365	1097.637633444273	2	549.8263549804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_LC(Carbamidomethyl (C))PRPSLKK_	REV__tr|U7SST1|U7SST1_FUSNUUvrABCsystemproteinCOS=FusobacteriumnucleatumCTI-5OX=1316586GN=uvrCPE=3SV=1	37.81151784470057	0.4459294069877048	2				NaN	NaN	0	NaN	1001	2386	3384
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3390	14.16	NaN	5974.4	30	0	2714	0.106			+	-1	TESDSMEM	8	45	473.1640200390811	944.3134871449622	2	473.16400146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_TESDSM(Oxidation (M))EM_	REV__ENSG00000147459|ENST00000276440|DOCK5	18.324413293986947	0.7971860551947066	2				NaN	NaN	0	NaN	1002	2386	3384
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3391	14.162	NaN	13132	30	0	1572.7	0.035			+	9001	EGAAESGAQRA	11	78	523.7465758637755	1045.478598794351	2	523.782958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EGAAESGAQRA_	REV__ENST00000507059.5_1_5:180043993-180056331:-|nuORF;REV__ENST00000512795.1_2_5:180043993-180046337:-|nuORF	82.7504851949679	0.12944296023181348	2				NaN	NaN	0	NaN	1003	2386	3384
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3404	14.189	NaN	33021	30	0	10386	0.214	+			15093	GTQIHKVCK	9	83	535.7925363048346	1069.570519676469	2	535.7928466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GTQIHKVC(Carbamidomethyl (C))K_	ENST00000594085.5_1_19:40854624-40871501:+|nuORF	157.32903759742106	0.0051608477690748295	2				NaN	NaN	0	NaN	1013	2389	3403
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3405	14.193	NaN	23366	30	0	4091.3	0.106	+			40167	STQSKVMNK	9	84	511.76865785533874	NaN	0	511.7685852050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STQSKVMNK_	ENSG00000165113|ENST00000376371|GKAP1;nc|ENSG00000165113|Q5VSY0-2|GKAP1	155.5846463517096	0.006928971805488876	2				NaN	NaN	0	NaN	1014	2389	3403
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3406	14.195	NaN	48276	30	0	37495	0.106	+			10368	ETYNKRHLK	9	54	396.88777752016887	1187.6415031607066	3	396.8876037597656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ETYNKRHLK_	ENST00000299505.6_1_19:34745491-34790780:+|nuORF;ENST00000592124.1_1_19:34756504-34790780:+|nuORF	32.81241826257853	0.4965981579233955	2				NaN	NaN	0	NaN	1015	2389	3403
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3407	14.197	NaN	35190	30	0	12903	0.106	+			10369	ETYNKRHLK	9	78	594.8279665603031	1187.6413801874062	2	594.8279418945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ETYNKRHLK_	ENST00000299505.6_1_19:34745491-34790780:+|nuORF;ENST00000592124.1_1_19:34756504-34790780:+|nuORF	141.52041321563706	0.009766778904176347	2				NaN	NaN	0	NaN	1016	2389	3403
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3408	14.199	NaN	15768	30	0	2736.3	0.106	+			44567	TTASQTNIKK	10	80	546.3065169554792	1090.5984809777583	2	546.3064575195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TTASQTNIKK_	ENSG00000225921|ENST00000451315|NOL7;nc|ENSG00000225921|Q9UMY1-2|NOL7;NOL7|p.K238Nfs*16|1|0.31|ENSG00000225921|chr6:13620760-13620760|A/-|frameshift_variant;NOL7|p.N240Mfs*14|1|0.23|ENSG00000225921|chr6:13620769-13620769|A/-|frameshift_variant	117.81106730687013	0.030421278947300796	2				NaN	NaN	0	NaN	1017	2389	3403
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3409	14.2	NaN	30706	30	0	11819	0.106			+	14758	GTKHSHIYK	9	67	357.53033393487533	1069.569172404826	3	357.5306701660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTKHSHIYK_	REV__tr|U7SPH1|U7SPH1_FUSNUGeranyltranstransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01735PE=3SV=1	42.396135135203025	0.392153681582562	2				NaN	NaN	0	NaN	1018	2389	3403
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3410	14.202	NaN	9710.3	30	0	975.39	0.034	+			3406	ASQGEVVRK	9	69	487.27481865297193	NaN	0	487.27471923828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASQGEVVRK_	ENSG00000136628|ENST00000366923|EPRS1	78.26377905018397	0.07733306720594871	2				NaN	NaN	0	NaN	1019	2389	3403
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3421	14.227	NaN	17755	30	0	4271.1	0.214	+			20295	KEPKEPKT	8	72	478.7738209340087	955.5330889348174	2	478.77386474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEPKEPKT_	CHD7|p.D2988Mfs*3|5|0.36|ENSG00000171316|chr8:60865895-60865895|G/-|frameshift_variant;CHD7|p.G2228Lfs*52|1|0.03|ENSG00000171316|chr8:60853406-60853407|-/TTGCCTTC|frameshift_variant;CHD7|p.L1020*|1|0.09|ENSG00000171316|chr8:60822599-60822599|T/-|frameshift_variant;CHD7|p.N2588Ifs*4|1|0.14|ENSG00000171316|chr8:60861054-60861054|A/-|frameshift_variant;ENSG00000171316|ENST00000423902|CHD7;nc|ENSG00000171316|Q9P2D1-2|CHD7;nc|ENSG00000171316|Q9P2D1-3|CHD7	82.24051045832904	0.30490469762271794	2				NaN	NaN	0	NaN	1027	2392	3420
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3422	14.231	NaN	10425	30	0	2565.4	0.106	+			6187	AVQPAPTRK	9	62	484.2875771898899	966.5606014465798	2	484.2875061035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVQPAPTRK_	ENSG00000109686|ENST00000604030|SH3D19;ENST00000478503.6_1_4:152043245-152086876:-|nuORF;nc|ENSG00000109686|Q5HYK7-2|SH3D19;nc|ENSG00000109686|Q5HYK7|SH3D19	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	1028	2392	3420
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3423	14.233	NaN	11861	30	0	1452	0.106	+			5337	ATVPMSKKK	9	77	495.294336237737	988.574119542274	2	495.29412841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATVPMSKKK_	ENSG00000100023|ENST00000398831|PPIL2;ENST00000462188.1_1_22:22049506-22049776:+|nuORF	56.43379154798735	0.2433427591689151	2				NaN	NaN	0	NaN	1029	2392	3420
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3424	14.235	NaN	6998.9	30	0	1134.3	0.106	+			19809	KEDEKKQEL	9	63	573.8040223124183	1145.5934916916365	2	573.8038940429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEDEKKQEL_	ENSG00000138640|ENST00000264344|FAM13A;ENST00000508360.5_1_4:89653076-89671014:-|nuORF;ENST00000511573.5_1_4:89649686-89680064:-|nuORF;nc|ENSG00000138640|O94988-1|FAM13A;nc|ENSG00000138640|O94988-3|FAM13A;nc|ENSG00000138640|O94988-5|FAM13A;nc|ENSG00000138640|O94988-6|FAM13A	109.43880257439609	0.029570636687953285	2				NaN	NaN	0	NaN	1030	2392	3420
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3425	14.237	NaN	6087	30	0	1657.7	0.106				-1	ATKAVCVLK	9	44	330.5317417610408	988.5733958833224	3	330.5318908691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_ATKAVC(Carbamidomethyl (C))VLK_	ENSG00000142168|ENST00000270142|SOD1;ENST00000470944.1_1_21:33032082-33032331:+|nuORF;ENST00000476106.5_1_21:33032082-33033903:+|nuORF	19.996771675451527	0.6112419832031292	2				NaN	NaN	0	NaN	1031	2392	3420
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3426	14.238	NaN	7196.2	30	0	3062.2	0.106	+			44078	TPTFVPYL	8	41	469.2561735999485	936.497794266697	2	469.2558288574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TPTFVPYL_	ENSG00000091129|ENST00000379028|NRCAM;nc|ENSG00000091129|Q92823-2|NRCAM;nc|ENSG00000091129|Q92823-3|NRCAM;nc|ENSG00000091129|Q92823-4|NRCAM;nc|ENSG00000091129|Q92823-5|NRCAM;nc|ENSG00000091129|Q92823-6|NRCAM;NRCAM|p.I903Dfs*20|1|0.06|ENSG00000091129|chr7:108180368-108180369|-/T|frameshift_variant	14.664097394203935	0.7913966407026132	2				NaN	NaN	0	NaN	1032	2392	3420
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3427	14.24	NaN	4651.6	30	0	876.11	0.035				-1	GLLGDCMLK	9	57	503.7566316476559	1005.4987103621119	2	503.7561950683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_GLLGDC(Carbamidomethyl (C))MLK_	ENSG00000140600|ENST00000427482|SH3GL3;nc|ENSG00000140600|Q99963-2|SH3GL3;nc|ENSG00000140600|Q99963-3|SH3GL3;nc|ENSG00000140600|Q99963-4|SH3GL3;SH3GL3|p.N207Sfs*2|1|0.07|ENSG00000140600|chr15:83576735-83576736|-/TCGT|frameshift_variant	53.351449002276354	0.2690372970092375	2				NaN	NaN	0	NaN	1033	2392	3420
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3438	14.266	NaN	25630	30	0	17553	0.214				-1	FMCARRPH	8	61	517.2441050061669	NaN	0	517.244384765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_FM(Oxidation (M))CARRPH_	ENST00000397574.6_1_11:615555-615988:-|nuORF	42.47446043378293	1.7418937515398478	2				NaN	NaN	0	NaN	1041	2395	3437
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3439	14.27	NaN	17418	30	0	1826.9	0.106	+			40407	STVGGQSVKK	10	78	495.7824312643818	NaN	0	495.7826843261719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STVGGQSVKK_	ENSG00000048649|ENST00000308488|RSF1;nc|ENSG00000048649|Q96T23-2|RSF1;nc|ENSG00000048649|Q96T23-3|RSF1;RSF1|p.V664Sfs*11|1|0.19|ENSG00000048649|chr11:77701239-77701240|-/T|frameshift_variant	74.1650062923329	0.1281759236810302	2				NaN	NaN	0	NaN	1042	2395	3437
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3440	14.272	NaN	12561	30	0	1708.4	0.106	+			55	AAAQNAIKK	9	76	457.77482842947853	913.5351039257571	2	457.7745666503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AAAQNAIKK_	ENSG00000137076|ENST00000314888|TLN1;ENSG00000171914|ENST00000636159|TLN2;nc|ENSG00000137076|Q9Y490-2|TLN1;TLN1|p.P1628Rfs*20|1|0.44|ENSG00000137076|chr9:35707144-35707144|G/-|frameshift_variant	147.69337715509954	0.007406765731929437	2				NaN	NaN	0	NaN	1043	2395	3437
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3441	14.274	NaN	27499	30	0	3004.4	0.106	+			3771	ATAEQACKEK	10	98	539.7637395607507	1077.5129261883012	2	539.7643432617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATAEQACKEK_	ENSG00000125844|ENST00000377813|RRBP1;nc|ENSG00000125844|Q9P2E9-3|RRBP1;RRBP1|p.A628Gfs*69|1|0.35|ENSG00000125844|chr20:17621915-17621916|-/T|frameshift_variant	187.50397467658743	0.0004846318765806019	2				NaN	NaN	0	NaN	1044	2395	3437
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3442	14.275	NaN	6187.4	30	0	1800.8	0.106	+			15173	GTSGPHVGK	9	60	420.22228333272216	838.4300137322443	2	420.2222595214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTSGPHVGK_	ENSG00000111859|ENST00000379446|NEDD9;ENST00000448183.6_1_6:11200558-11306280:-|nuORF;nc|ENSG00000111859|Q14511-2|NEDD9;nc|ENSG00000111859|Q14511-3|NEDD9;NEDD9|p.P245Lfs*3|2|0.37|ENSG00000111859|chr6:11191135-11191135|G/-|frameshift_variant	82.24051045832904	0.08786059719216216	2				NaN	NaN	0	NaN	1045	2395	3437
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3443	14.277	NaN	31270	30	0	6599	0.106	+			34207	RTDTASRLK	9	84	524.2993723827392	1046.5841918322783	2	524.30029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RTDTASRLK_	ENSG00000054654|ENST00000555002|SYNE2;ENST00000394768.6_2_14:64542710-64692241:+|nuORF;ENST00000554805.6_2_14:64676062-64692241:+|nuORF;ENST00000555022.5_2_14:64671104-64692241:+|nuORF;nc|ENSG00000054654|Q8WXH0-13|SYNE2;nc|ENSG00000054654|Q8WXH0-3|SYNE2;nc|ENSG00000054654|Q8WXH0-4|SYNE2;nc|ENSG00000054654|Q8WXH0-7|SYNE2;nc|ENSG00000054654|Q8WXH0|SYNE2;SYNE2|p.S6651Rfs*83|1|0.29|ENSG00000054654|chr14:64220596-64220597|-/G|frameshift_variant	106.88024417677582	0.032181361622142884	2				NaN	NaN	0	NaN	1046	2395	3437
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3444	14.279	NaN	11690	30	0	2058.1	0.036			+	50548	YASIYIVKQ	9	62	542.8065748873573	1083.5985968415146	2	542.80712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YASIYIVKQ_	REV__nc|ENSG00000177707|Q9NQS3-2|NECTIN3	47.657333605630114	0.33044192980041115	2				NaN	NaN	0	NaN	1047	2395	3437
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3455	14.304	NaN	16438	30	0	3645.3	0.214			+	-1	AQPMTPGALLG	11	65	536.2776386156035	1070.5407242980068	2	536.2786865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_AQPM(Oxidation (M))TPGALLG_	REV__ENSG00000124151|ENST00000371998|NCOA3;REV__nc|ENSG00000124151|Q9Y6Q9-2|NCOA3;REV__nc|ENSG00000124151|Q9Y6Q9-3|NCOA3;REV__nc|ENSG00000124151|Q9Y6Q9-4|NCOA3;REV__nc|ENSG00000124151|Q9Y6Q9-5|NCOA3	37.81151784470057	0.5878881669006212	2				NaN	NaN	0	NaN	1055	2398	3454
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3456	14.308	NaN	8462.5	30	0	1612.4	0.106				-1	MWMCMDLQ	8	59	558.2072841275915	1114.400015321983	2	558.2070922851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))M(Oxidation (M))WMCMDLQ_	ENST00000549838.5_2_14:32068516-32068552:+|nuORF	19.359975847455235	0.7988239741663654	2				NaN	NaN	0	NaN	1056	2398	3454
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3457	14.31	NaN	8106	30	0	1780.7	0.106	+			9343	EINANRADAE	10	61	551.7593458149261	NaN	0	551.7430419921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EINANRADAE_	ENSG00000077380|ENST00000397119|DYNC1I2;ENST00000479806.1_1_2:172583261-172604396:+|nuORF;nc|ENSG00000077380|Q13409-2|DYNC1I2;nc|ENSG00000077380|Q13409-3|DYNC1I2;nc|ENSG00000077380|Q13409-5|DYNC1I2;nc|ENSG00000077380|Q13409-6|DYNC1I2;nc|ENSG00000077380|Q13409-7|DYNC1I2	35.15202426646627	0.38475398474706135	2				NaN	NaN	0	NaN	1057	2398	3454
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3458	14.312	NaN	4466.4	30	0	811.75	0.106	+			15659	GVLYYVEH	8	53	490.2485405812051	978.4825282292102	2	490.24786376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GVLYYVEH_	ENSG00000138078|ENST00000409411|PREPL;nc|ENSG00000138078|Q4J6C6-2|PREPL;nc|ENSG00000138078|Q4J6C6-3|PREPL;nc|ENSG00000138078|Q4J6C6|PREPL	35.200714571348534	0.6875396545722289	2				NaN	NaN	0	NaN	1058	2398	3454
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3459	14.313	NaN	5392.6	30	0	1267.2	0.106	+			491	AAYSHHYSK	9	62	532.2521950281122	1062.4898371230242	2	532.2515869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AAYSHHYSK_	ENSG00000059378|ENST00000263549|PARP12	30.317721548370564	0.5199124245378496	2				NaN	NaN	0	NaN	1059	2398	3454
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3460	14.315	NaN	6499.5	30	0	1408.4	0.106				-1	RGMQGPQEW	9	49	552.7503074717231	1103.486062010246	2	554.2255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_RGM(Oxidation (M))QGPQEW_	ENST00000543561.1_1_16:67039172-67039418:+|nuORF	21.9598887501803	0.5980208138527809	2				NaN	NaN	0	NaN	1060	2398	3454
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3461	14.317	NaN	1738.4	30	0	493.68	0.035			+	9369	EKAFDSSII	9	41	337.178466796875	NaN	0	337.178466796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EKAFDSSII_	REV__tr|U7SSH0|U7SSH0_FUSNUDNAtopoisomeraseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01631PE=3SV=1	29.14955571784316	0.3303970763161698	2				NaN	NaN	0	NaN	1061	2398	3454
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3472	14.343	NaN	11355	30	0	1541	0.214	+			5979	AVLQAHHAK	9	69	487.77872523459575	973.5428975359915	2	487.7798156738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVLQAHHAK_	ENSG00000090621|ENST00000372858|PABPC4;ENST00000549280.1_1_12:60205892-60206354:+|nuORF;nc|ENSG00000090621|Q13310-2|PABPC4;nc|ENSG00000090621|Q13310|PABPC4	79.45101966838831	0.09992237243120712	2				NaN	NaN	0	NaN	1069	2401	3471
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3473	14.347	NaN	5101.8	30	0	537.29	0.106	+			44548	TTAEGMAKK	9	68	468.7447667600872	935.4749805869744	2	468.74432373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTAEGMAKK_	ENSG00000184897|ENST00000333762|H1-10	104.74654710444128	0.034358562718640136	2				NaN	NaN	0	NaN	1070	2401	3471
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3474	14.349	NaN	5903.9	30	0	1435.5	0.106	+			32470	QVLVVNGGE	9	64	457.750949821224	913.4873467092481	2	457.7503662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QVLVVNGGE_	ENSG00000023287|ENST00000025008|RB1CC1;nc|ENSG00000023287|Q8TDY2-2|RB1CC1;RB1CC1|p.F304Lfs*6|1|0.47|ENSG00000023287|chr8:52673935-52673935|A/-|frameshift_variant;RB1CC1|p.K964Sfs*13|1|0.31|ENSG00000023287|chr8:52656938-52656938|T/-|frameshift_variant;RB1CC1|p.L547Ffs*7|1|0.05|ENSG00000023287|chr8:52660644-52660645|-/A|frameshift_variant;RB1CC1|p.L965Afs*4|1|0.35|ENSG00000023287|chr8:52656937-52656938|-/T|frameshift_variant;RB1CC1|p.N872Kfs*2|1|0.31|ENSG00000023287|chr8:52657213-52657214|-/T|frameshift_variant	76.7741389293348	0.11149722112137898	2				NaN	NaN	0	NaN	1071	2401	3471
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3475	14.35	NaN	27190	30	0	4744.9	0.106	+			41090	SVINNSHNK	9	86	506.7620729634948	1011.5095929937896	2	506.7620849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVINNSHNK_	ENSG00000121892|ENST00000303538|PDS5A;nc|ENSG00000121892|Q29RF7-3|PDS5A	150.81021883065287	0.006680279908938716	2				NaN	NaN	0	NaN	1072	2401	3471
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3476	14.352	NaN	9245.7	30	0	1637	0.106	+			47170	VLSTRNENK	9	65	530.7912019882648	NaN	0	530.822021484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VLSTRNENK_	DSG2|p.I845*|1|0.27|ENSG00000046604|chr18:31545914-31545914|A/-|frameshift_variant;ENSG00000046604|ENST00000261590|DSG2	75.04331003522576	0.0883683072398826	2				NaN	NaN	0	NaN	1073	2401	3471
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3477	14.354	NaN	17273	30	0	5936.1	0.106			+	24744	LHSKEPRK	8	71	332.19776645150205	993.5714699547061	3	332.1978759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LHSKEPRK_	REV__ENSG00000127124|ENST00000372583|HIVEP3;REV__HIVEP3|p.G2228Vfs*5|1|0.27|ENSG00000127124|chr1:41510989-41510989|C/-|frameshift_variant;REV__nc|ENSG00000127124|Q5T1R4-2|HIVEP3	68.484700416344	0.4195245774506064	2				NaN	NaN	0	NaN	1074	2401	3471
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3478	14.356	NaN	11048	30	0	1907.6	0.037			+	-1	MGPQNQIKLL	10	72	579.3235050236008	NaN	0	579.3233032226562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_M(Oxidation (M))GPQNQIKLL_	REV__AluSp_dup17171|chr6:42956085-42956345:+|2.9082291479174875|0.2092895351215914|3.8|479.0|5|2|sense	42.396135135203025	0.3536752194735987	2				NaN	NaN	0	NaN	1075	2401	3471
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3491	14.384	NaN	23307	30	0	5419.4	0.214			+	9068	EGGQCMVSLL	10	80	518.7415374567032	1035.4685219802063	2	518.7415161132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EGGQCMVSLL_	REV__SLC8A2|p.T417M|1|0.39|ENSG00000118160|chr19:47457020-47457020|G/A|missense_variant	90.36981228632155	0.12895663264417576	2				NaN	NaN	0	NaN	1085	2404	3490
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3492	14.387	NaN	8405.1	30	0	1615.5	0.106	+			4389	ATHLVTKAK	9	63	484.7979945742534	967.5814362153068	2	484.7978210449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATHLVTKAK_	ENSG00000160584|ENST00000445177|SIK3;ENST00000485363.1_1_11:116775672-116969011:-|nuORF;nc|ENSG00000160584|Q9Y2K2-7|SIK3;nc|ENSG00000160584|Q9Y2K2-8|SIK3;nc|ENSG00000160584|Q9Y2K2|SIK3;SIK3|p.F285Lfs*9|1|0.33|ENSG00000160584|chr11:116896263-116896263|A/-|frameshift_variant	136.26810882979174	0.012230845423532208	2				NaN	NaN	0	NaN	1086	2404	3490
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3493	14.389	NaN	13984	30	0	1566.7	0.106			+	31221	QGTQTQVHASK	11	70	592.8044783987621	1183.594403864324	2	592.8048095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QGTQTQVHASK_	REV__ENSG00000095794|ENST00000685392|CREM;REV__ENST00000482646.5_1_10:35426742-35437470:+|nuORF;REV__ENST00000496626.5_1_10:35437299-35441216:+|nuORF;REV__nc|ENSG00000095794|Q03060-1|CREM;REV__nc|ENSG00000095794|Q03060-15|CREM;REV__nc|ENSG00000095794|Q03060-16|CREM;REV__nc|ENSG00000095794|Q03060-17|CREM;REV__nc|ENSG00000095794|Q03060-19|CREM;REV__nc|ENSG00000095794|Q03060-2|CREM;REV__nc|ENSG00000095794|Q03060-20|CREM;REV__nc|ENSG00000095794|Q03060-21|CREM;REV__nc|ENSG00000095794|Q03060-25|CREM;REV__nc|ENSG00000095794|Q03060-26|CREM;REV__nc|ENSG00000095794|Q03060-30|CREM;REV__nc|ENSG00000095794|Q03060-32|CREM;REV__nc|ENSG00000095794|Q03060-6|CREM;REV__nc|ENSG00000095794|Q03060|CREM	51.52775601994872	0.4002081502334604	2				NaN	NaN	0	NaN	1087	2404	3490
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3494	14.391	NaN	8664.4	30	0	5260.8	0.106			+	41203	SVLDSRHQA	9	49	338.1769447802242	1011.5090049408725	3	338.1771545410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVLDSRHQA_	REV__ENSG00000105639|ENST00000458235|JAK3;REV__ENST00000526008.5_1_19:17949989-17958765:-|nuORF;REV__ENST00000527031.5_1_19:17947866-17955268:-|nuORF;REV__ENST00000528293.1_1_19:17953834-17954275:-|nuORF;REV__nc|ENSG00000105639|P52333-2|JAK3;REV__nc|ENSG00000105639|P52333-4|JAK3	40.77816245573522	0.41113185337114944	2				NaN	NaN	0	NaN	1088	2404	3490
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3495	14.393	NaN	17632	30	0	5188.3	0.106	+			31612	QLYRHSQEK	9	76	594.8097202695039	1187.6048876058078	2	594.8097534179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QLYRHSQEK_	ENST00000497302.1_1_1:12049245-12049278:+|nuORF	101.45984612302182	0.0377122763612125	2				NaN	NaN	0	NaN	1089	2404	3490
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3496	14.395	NaN	15429	30	0	3315.2	0.106	+			4032	ATDDSKAVCR	10	78	561.7641060429816	1121.513659152763	2	561.7645874023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_ATDDSKAVC(Carbamidomethyl (C))R_	ENSG00000115758|ENST00000234111|ODC1	148.6902309647307	0.008728094565931875	2				NaN	NaN	0	NaN	1090	2404	3490
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3497	14.397	NaN	9246.1	30	0	1432.5	0.036			+	8596	ECESDWTQL	9	63	555.7229592619855	1109.4313655907708	2	555.7232055664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ECESDWTQL_	REV__ENST00000546571.5_1_12:109095090-109123983:-|nuORF	27.882242232435846	0.5426732730940306	2				NaN	NaN	0	NaN	1091	2404	3490
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3508	14.422	NaN	26590	30	0	3015.9	0.214	+			45702	VAAKPVATK	9	78	442.78165677144455	883.5487606096891	2	442.7814636230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VAAKPVATK_	COL6A3|p.A2956Lfs*45|1|0.33|ENSG00000163359|chr2:237336234-237336234|C/-|frameshift_variant;COL6A3|p.A2957Lfs*44|1|0.33|ENSG00000163359|chr2:237336232-237336232|A/-|frameshift_variant;COL6A3|p.G3016Vfs*19|1|0.34|ENSG00000163359|chr2:237334810-237334810|G/-|frameshift_variant;ENSG00000163359|ENST00000295550|COL6A3;ENST00000491769.1_1_2:238233419-238250825:-|nuORF;nc|ENSG00000163359|P12111-2|COL6A3;nc|ENSG00000163359|P12111-4|COL6A3	158.07458414430337	0.004987072822166904	2				NaN	NaN	0	NaN	1099	2407	3507
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3509	14.425	NaN	20115	30	0	5943.5	0.106			+	9942	ERACPAQS	8	63	459.7092625136716	917.4039720941432	2	459.7087707519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_ERAC(Carbamidomethyl (C))PAQS_	REV__ENSG00000154545|ENST00000471932|MAGED4;REV__ENSG00000187243|ENST00000335504|MAGED4B;REV__ENST00000470594.5_1_X:51809762-51812242:-|nuORF;REV__nc|ENSG00000187243|Q96JG8-2|MAGED4;REV__nc|ENSG00000187243|Q96JG8-3|MAGED4;REV__nc|ENSG00000187243|Q96JG8-4|MAGED4	72.87924865735499	0.38290713436690915	2				NaN	NaN	0	NaN	1100	2407	3507
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3510	14.428	NaN	13732	30	0	2351.5	0.106	+			3872	ATAPAPTAHK	10	74	482.7640649943185	963.513577055437	2	482.7637939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATAPAPTAHK_	ENSG00000184897|ENST00000333762|H1-10	90.60085204095205	0.12763388345653318	2				NaN	NaN	0	NaN	1101	2407	3507
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3511	14.429	NaN	5715.9	30	0	2212.6	0.106				-1	AGKGMRRQK	9	62	349.8668880134208	1046.5788346404624	3	349.8668518066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_AGKGM(Oxidation (M))RRQK_	ENST00000536254.6_1_19:37178536-37180370:+|nuORF	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	1102	2407	3507
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3512	14.431	NaN	9453	30	0	2769.4	0.106	+			31768	QPGLEGERGP	10	55	520.2627747664675	1038.5109965997349	2	520.26318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QPGLEGERGP_	COL5A3|p.P1048Lfs*96|1|0.25|ENSG00000080573|chr19:9977456-9977456|G/-|frameshift_variant;ENSG00000080573|ENST00000264828|COL5A3	35.61828744233558	0.588957954432594	2				NaN	NaN	0	NaN	1103	2407	3507
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3513	14.433	NaN	6921.6	30	0	1038.8	0.106	+			12265	GAVLNPHEA	9	60	454.2350813484578	906.4556097637156	2	454.2349548339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GAVLNPHEA_	ENSG00000131477|ENST00000253796|RAMP2;nc|ENSG00000131477|O60895-2|RAMP2;RAMP2|p.I154Hfs*16|1|0.28|ENSG00000131477|chr17:42762778-42762779|-/C|frameshift_variant	47.91560031466742	0.327412564698279	2				NaN	NaN	0	NaN	1104	2407	3507
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3514	14.435	NaN	5947.9	30	0	1989	0.032			+	44531	TSVTSDSA	8	51	384.17444595123936	766.3343389692787	2	384.1744384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TSVTSDSA_	REV__ENST00000342085.8_1_16:2648895-2649351:+|nuORF	18.324413293986947	0.7971860551947066	2				NaN	NaN	0	NaN	1105	2407	3507
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3526	14.46	NaN	54160	30	0	17857	0.214	+			13957	GSAKPGLQK	9	92	443.26133076737057	884.5081086015412	2	443.26129150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSAKPGLQK_	ENSG00000104267|ENST00000285379|CA2	113.41158876095287	0.025516849225023126	2				NaN	NaN	0	NaN	1114	2410	3525
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3527	14.464	NaN	17723	30	0	2793.6	0.106	+			40161	STQQPLTKK	9	82	515.7986559590626	NaN	0	515.7987060546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STQQPLTKK_	ENSG00000182511|ENST00000328850|FES;ENST00000464684.5_1_15:91434747-91438785:+|nuORF;ENST00000496379.5_1_15:91433070-91435551:+|nuORF;nc|ENSG00000182511|P07332-2|FES;nc|ENSG00000182511|P07332-3|FES;nc|ENSG00000182511|P07332-4|FES	128.60217544463768	0.0008034130035139065	2				NaN	NaN	0	NaN	1115	2410	3525
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3528	14.466	NaN	16208	30	0	6870.2	0.106	+			21812	KRDKGETIQ	9	55	537.7988581373968	1073.5831633415935	2	537.799072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KRDKGETIQ_	ENSG00000111361|ENST00000424014|EIF2B1;ENST00000452159.6_1_12:124114706-124118224:-|nuORF;ENST00000543940.1_1_12:124114818-124118191:-|nuORF;nc|ENSG00000111361|Q14232-2|EIF2B1	31.529811441608018	0.5085848003137583	2				NaN	NaN	0	NaN	1116	2410	3525
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3529	14.468	NaN	6669.8	30	0	1382.7	0.106	+			1928	AISETKVKK	9	59	502.3111566761351	1002.6077604190702	2	502.3111267089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AISETKVKK_	ENSG00000184634|ENST00000374080|MED12;MED12|p.E1337Kfs*8|1|0.26|ENSG00000184634|chrX:71130173-71130173|G/-|frameshift_variant;nc|ENSG00000184634|Q93074-2|MED12;nc|ENSG00000184634|Q93074-3|MED12	118.74307786436346	0.02196067127630568	2				NaN	NaN	0	NaN	1117	2410	3525
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3530	14.469	NaN	17219	30	0	3624.1	0.106	+			31896	QQETVTRASE	10	63	574.7800065330279	1147.5454601328556	2	574.7801513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QQETVTRASE_	ENST00000492324.1_1_5:133311599-133311641:-|nuORF	30.317721548370564	0.6322445173429027	2				NaN	NaN	0	NaN	1118	2410	3525
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3531	14.471	NaN	14676	30	0	4407.5	0.106			+	13638	GMLNLNILK	9	65	339.20522085606376	1014.5938331683913	3	339.20513916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GMLNLNILK_	REV__ENST00000257336.5_1_13:103459816-103460068:+|nuORF	40.77816245573522	0.41113185337114944	2				NaN	NaN	0	NaN	1119	2410	3525
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3532	14.473	NaN	9254.7	30	0	1538.5	0.034	+			11682	FRCGGNKK	8	49	455.2403756562575	908.4661983793151	2	455.2405090332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FRCGGNKK_	ENSG00000137731|ENST00000292079|FXYD2;ENST00000534383.5_1_11:117691389-117694973:-|nuORF;nc|ENSG00000137731|P54710-2|FXYD2	35.200714571348534	0.6875396545722289	2				NaN	NaN	0	NaN	1120	2410	3525
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3544	14.499	NaN	25170	30	0	5690.8	0.214	+			41053	SVIENAKKK	9	78	508.80830743885673	1015.6020619445135	2	508.8082275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVIENAKKK_	ENSG00000132305|ENST00000410111|IMMT;ENST00000409258.2_1_2:86386442-86398424:-|nuORF;ENST00000474969.5_1_2:86385703-86422514:-|nuORF;ENST00000490238.5_1_2:86385703-86389088:-|nuORF;nc|ENSG00000132305|Q16891-2|IMMT;nc|ENSG00000132305|Q16891-3|IMMT;nc|ENSG00000132305|Q16891-4|IMMT	145.15565482312357	0.00806134135205793	2				NaN	NaN	0	NaN	1129	2413	3543
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3545	14.503	NaN	13676	30	0	1519.6	0.106	+			6049	AVMGNPKVK	9	80	480.27058835146534	958.5266237697307	2	480.27056884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_AVM(Oxidation (M))GNPKVK_	ENSG00000223609|ENST00000650601|HBD;ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF;HBD|p.A63V|1|0.34|ENSG00000223609|chr11:5234118-5234118|G/A|missense_variant	82.30502934623384	0.08758161712619916	2				NaN	NaN	0	NaN	1130	2413	3543
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3546	14.505	NaN	23355	30	0	4503.1	0.106	+			32783	RASHPIVQK	9	75	345.87319403166737	1034.5977526952022	3	345.8735046386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RASHPIVQK_	ENSG00000112159|ENST00000369393|MDN1;MDN1|p.E2692*|2|0.32|ENSG00000112159|chr6:89706133-89706134|-/A|frameshift_variant;MDN1|p.F2691Lfs*7|2|0.37|ENSG00000112159|chr6:89706134-89706134|A/-|frameshift_variant;MDN1|p.K2642Nfs*17|2|0.29|ENSG00000112159|chr6:89707449-89707449|T/-|frameshift_variant;MDN1|p.L4077Cfs*15|1|0.16|ENSG00000112159|chr6:89680625-89680625|G/-|frameshift_variant;MDN1|p.L5278Ffs*6|1|0.18|ENSG00000112159|chr6:89652273-89652274|-/A|frameshift_variant	62.107414245175825	0.1960472003779324	2				NaN	NaN	0	NaN	1131	2413	3543
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3547	14.507	NaN	24589	30	0	3408.3	0.106	+			15153	GTSETSKTLK	10	82	526.2853937708798	1050.5562346085594	2	526.2855224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTSETSKTLK_	ENSG00000153201|ENST00000283195|RANBP2;RANBP2|p.C2737Vfs*35|1|0.18|ENSG00000153201|chr2:108772957-108772957|T/-|frameshift_variant;RANBP2|p.F3068Lfs*10|1|0.06|ENSG00000153201|chr2:108782692-108782692|T/-|frameshift_variant;RANBP2|p.H3114Sfs*18|1|0.33|ENSG00000153201|chr2:108782827-108782828|-/T|frameshift_variant;RANBP2|p.K1989Nfs*9|1|0.05|ENSG00000153201|chr2:108766505-108766506|-/TATCCTG|frameshift_variant;RANBP2|p.K2576Nfs*63|2|0.22|ENSG00000153201|chr2:108768262-108768262|A/-|frameshift_variant	131.61620852596164	0.01298938390812184	2				NaN	NaN	0	NaN	1132	2413	3543
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3548	14.508	NaN	16063	30	0	2551.7	0.106	+			23166	KVYTKSSHLK	10	84	595.848444146664	1189.6823353601278	2	595.8485107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KVYTKSSHLK_	ENSG00000067082|ENST00000497571|KLF6;ENSG00000102349|ENST00000468660|KLF8;ENSG00000102554|ENST00000377687|KLF5;ENSG00000109787|ENST00000261438|KLF3;ENSG00000118263|ENST00000309446|KLF7;ENSG00000118922|ENST00000703967|KLF12;ENST00000358094.7_1_X:56295423-56310924:+|nuORF;ENST00000462627.5_1_X:56295800-56310924:+|nuORF;nc|ENSG00000067082|Q99612-2|KLF6;nc|ENSG00000067082|Q99612-3|KLF6;nc|ENSG00000102554|Q13887-2|KLF5;nc|ENSG00000102554|Q13887-4|KLF5;nc|ENSG00000118263|O75840-2|KLF7;nc|ENSG00000118263|O75840-4|KLF7	142.36107225718385	0.01012457621782354	2				NaN	NaN	0	NaN	1133	2413	3543
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3549	14.51	NaN	11770	30	0	2417.9	0.106			+	12304	GDAGIIVDFE	10	68	518.2527516270209	1034.4909503208416	2	518.2530517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GDAGIIVDFE_	REV__ENSG00000133816|ENST00000683283|MICAL2;REV__ENST00000530691.5_1_11:12229562-12281716:+|nuORF;REV__MICAL2|p.E821Kfs*48|1|0.07|ENSG00000133816|chr11:12242336-12242337|AG/-|frameshift_variant;REV__nc|ENSG00000133816|O94851-2|MICAL2;REV__nc|ENSG00000133816|O94851-3|MICAL2;REV__nc|ENSG00000133816|O94851-4|MICAL2;REV__nc|ENSG00000133816|O94851-5|MICAL2;REV__nc|ENSG00000133816|O94851-6|MICAL2;REV__nc|ENSG00000133816|O94851|MICAL2	47.657333605630114	0.47858658696240314	2				NaN	NaN	0	NaN	1134	2413	3543
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3550	14.512	NaN	10538	30	0	3040	0.035	+			21936	KSADPLKSK	9	45	325.19393368696	972.55997166108	3	325.1940612792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KSADPLKSK_	CAPN7|p.K253Nfs*21|1|0.35|ENSG00000131375|chr3:15227870-15227870|A/-|frameshift_variant;ENSG00000131375|ENST00000253693|CAPN7;ENST00000457023.1_1_3:15247773-15262489:+|nuORF	49.536043120802724	0.308405419312776	2				NaN	NaN	0	NaN	1135	2413	3543
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3565	14.543	NaN	62635	30	0	27398	0.204	+			14686	GTIGHVAHGK	10	90	488.7696846065734	975.5248162799468	2	488.7694396972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTIGHVAHGK_	EIF2S3|p.I441Nfs*4|1|0.29|ENSG00000130741|chrX:24073223-24073224|-/A|frameshift_variant;ENSG00000130741|ENST00000253039|EIF2S3;ENSG00000180574|ENST00000538173|EIF2S3B;nc|ENSG00000180574|Q2VIR3-2|EIF2S3B	124.08010499294276	0.021567188538240013	2				NaN	NaN	0	NaN	1147	2416	3564
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3566	14.547	NaN	28969	30	0	13411	0.106			+	19352	KAKRHMEAK	9	77	366.8779791003276	1097.6121079011828	3	366.878173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KAKRHMEAK_	REV__ARCN1|p.R160H|1|0.39|ENSG00000095139|chr11:118583840-118583840|G/A|missense_variant	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	1148	2416	3564
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3567	14.549	NaN	30296	30	0	7221.6	0.106	+			33104	RELPDTLGPQ	10	80	563.2988314746299	1124.5831100160597	2	563.2987670898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RELPDTLGPQ_	ENST00000338502.8_2_19:38887395-38887539:+|nuORF	77.31757898189308	0.2175361111083648	2				NaN	NaN	0	NaN	1149	2416	3564
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3568	14.551	NaN	7332	30	0	1188.2	0.106	+			19740	KDVGGRLQVG	10	68	514.7963110422035	1027.5780691512068	2	514.7958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KDVGGRLQVG_	CLASP2|p.L1169Ffs*6|1|0.14|ENSG00000163539|chr3:33510729-33510730|-/A|frameshift_variant;CLASP2|p.M744Nfs*4|1|0.19|ENSG00000163539|chr3:33560868-33560869|-/T|frameshift_variant;CLASP2|p.M744Wfs*33|2|0.29|ENSG00000163539|chr3:33560869-33560869|T/-|frameshift_variant;CLASP2|p.N188Kfs*2|1|0.21|ENSG00000163539|chr3:33619657-33619658|-/T|frameshift_variant;ENSG00000163539|ENST00000682230|CLASP2;ENST00000467956.1_1_3:33731266-33759494:-|nuORF;nc|ENSG00000163539|O75122-3|CLASP2	49.44154591367651	0.46214596422418036	2				NaN	NaN	0	NaN	1150	2416	3564
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3569	14.553	NaN	7269.4	30	0	1028.3	0.106	+			14887	GTLSESTHK	9	67	480.2431922417878	958.4718315503757	2	480.2430114746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTLSESTHK_	ENSG00000135775|ENST00000366669|COG2;ENST00000478710.1_1_1:230825798-230827388:+|nuORF;ENST00000490900.1_1_1:230824170-230825900:+|nuORF;nc|ENSG00000135775|Q14746-2|COG2	65.46538089061403	0.16805504838372562	2				NaN	NaN	0	NaN	1151	2416	3564
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3570	14.554	NaN	8468	30	0	2964.6	0.106	+			47816	VSKKAITKK	9	58	334.8937683197064	1001.6594755593192	3	334.8938903808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VSKKAITKK_	ENSG00000183354|ENST00000399933|KIAA2026;KIAA2026|p.I903Tfs*10|1|0.06|ENSG00000183354|chr9:5923288-5923289|-/GAAAGTGATG|frameshift_variant;KIAA2026|p.K1017Hfs*3|1|0.03|ENSG00000183354|chr9:5922948-5922949|-/CAAATGG|frameshift_variant	27.047317107675042	0.5504760921104335	2				NaN	NaN	0	NaN	1152	2416	3564
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3571	14.556	NaN	9534.9	30	0	3571.1	0.035				-1	 	0	53	500.74870638396175	999.4828598347235	2	500.7486267089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1153	2416	3564
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3583	14.582	NaN	664300	30	0	192090	0.052	+			15382	GTYDAKVKK	9	77	505.28796746982687	1008.5613820064538	2	505.2888488769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTYDAKVKK_	ENSG00000159713|ENST00000393957|TPPP3	136.26810882979174	0.012230845423532208	2				NaN	NaN	0	NaN	1162	2419	3582
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3584	14.583	NaN	876530	30	0	269790	0.061	+			3214	ASKTFTVQK	9	78	337.1938925653179	1008.5598482961539	3	337.1944580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASKTFTVQK_	DSG3|p.T441Lfs*10|1|0.2|ENSG00000134757|chr18:31465363-31465363|A/-|frameshift_variant;ENSG00000134757|ENST00000257189|DSG3	47.657333605630114	0.33044192980041115	2				NaN	NaN	0	NaN	1163	2419	3582
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3585	14.584	NaN	129350	30	0	55623	0.106	+			10144	ESSARVQEK	9	65	517.2668758314593	1032.5191987297185	2	517.2669067382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ESSARVQEK_	ENSG00000135596|ENST00000358807|MICAL1;ENST00000456101.6_1_6:109766698-109772967:-|nuORF;MICAL1|p.T754Qfs*150|1|0.53|ENSG00000135596|chr6:109446741-109446741|C/-|frameshift_variant;nc|ENSG00000135596|Q8TDZ2-4|MICAL1	51.19269402634007	0.2889735674168909	2				NaN	NaN	0	NaN	1164	2419	3582
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3586	14.586	NaN	67839	30	0	13885	0.106	+			48145	VSWGDGCAQK	10	59	554.2478437875587	1106.4811346419174	2	554.2487182617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_VSWGDGC(Carbamidomethyl (C))AQK_	CON__P07477;ENSG00000204983|ENST00000311737|PRSS1;ENST00000463701.1_1_7:142459574-142460868:+|nuORF	49.44154591367651	0.46214596422418036	2				NaN	NaN	0	NaN	1165	2419	3582
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3587	14.588	NaN	47664	30	0	10520	0.106			+	3213	ASKSVSWKV	9	86	331.1904621361512	990.5495570086537	3	331.19073486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASKSVSWKV_	REV__ENSG00000156564|ENST00000338305|LRFN2;REV__LRFN2|p.W640Lfs*15|1|0.41|ENSG00000156564|chr6:40392395-40392396|-/G|frameshift_variant	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	1166	2419	3582
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3588	14.59	NaN	36512	30	0	11115	0.106			+	23039	KVSYVAKG	8	77	426.25320322878775	850.4918535243755	2	426.25299072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KVSYVAKG_	REV__MER65-int_dup829|chr19:41730434-41731149:+|4.724704930580082|0.0139534672083954|8.4|482.0|36|2|anti-sense	73.97473282117947	0.3737790450121076	2				NaN	NaN	0	NaN	1167	2419	3582
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3589	14.592	NaN	54308	30	0	22289	0.106			+	46046	VCETSGLALY	10	65	528.2589296330162	NaN	0	528.2576293945312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VCETSGLALY_	REV__ENSG00000174339|ENST00000307832|OR2Y1;REV__OR2Y1|p.Y277Ifs*3|2|0.4|ENSG00000174339|chr5:180739230-180739230|A/-|frameshift_variant	27.882242232435846	0.4086243523356342	2				NaN	NaN	0	NaN	1168	2419	3582
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3590	14.594	NaN	34351	30	0	9367.6	0.106				-1	QMVDAKNMM	9	57	558.2302160543222	1114.4458791754444	2	558.23046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	3 Oxidation (M)	_QM(Oxidation (M))VDAKNM(Oxidation (M))M(Oxidation (M))_	ENST00000406999.2_1_6:153219925-153220018:+|nuORF	29.14955571784316	0.5308295550522326	2				NaN	NaN	0	NaN	1169	2419	3582
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3591	14.595	NaN	22027	30	0	5628.6	0.035			+	44981	TVCNQIIEQ	9	68	524.2619025293773	1046.5092521255544	2	524.2620239257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	9	Unmodified	_TVCNQIIEQ_	REV__ENSG00000188738|ENST00000424728|FSIP2;REV__FSIP2|p.K6152Rfs*27|1|0.43|ENSG00000188738|chr2:185807758-185807758|A/-|frameshift_variant;REV__FSIP2|p.K6528Nfs*5|1|0.33|ENSG00000188738|chr2:185808884-185808884|A/-|frameshift_variant;REV__FSIP2|p.V6322*|1|0.42|ENSG00000188738|chr2:185808265-185808265|A/-|frameshift_variant	44.377184641726394	0.36891676396732553	2				NaN	NaN	0	NaN	1170	2419	3582
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3603	14.62	NaN	16088	30	0	3340.7	0.214	+			19761	KEAAAEAKK	9	81	473.2721104135298	944.5296678938596	2	473.27178955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEAAAEAKK_	ENSG00000146243|ENST00000369940|IRAK1BP1	93.1432384553994	0.056003526918089595	2				NaN	NaN	0	NaN	1179	2422	3602
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3604	14.624	NaN	6383.9	30	0	2284.2	0.106	+			47770	VSGTVARLAK	10	64	334.5416057392504	1000.6029878179511	3	334.54180908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSGTVARLAK_	ENSG00000188996|ENST00000380907|HUS1B	46.45678178249821	0.4896490706773647	2				NaN	NaN	0	NaN	1180	2422	3602
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3605	14.626	NaN	5011.5	30	0	599.73	0.106	+			38640	SSHVPIQKK	9	59	512.3006819088606	1022.5868108845212	2	512.3007202148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSHVPIQKK_	ENSG00000158290|ENST00000371322|CUL4B;nc|ENSG00000158290|Q13620|CUL4B	40.05817265558897	0.419577045485086	2				NaN	NaN	0	NaN	1181	2422	3602
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3606	14.628	NaN	2176.2	30	0	492.97	0.106	+			30711	QDFGGGGGA	9	39	383.16179056048617	764.3090281877724	2	383.16180419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QDFGGGGGA_	ENST00000306336.5_2_2:85835425-85835605:-|nuORF	29.14955571784316	0.5308295550522326	2				NaN	NaN	0	NaN	1182	2422	3602
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3607	14.63	NaN	8130.6	30	0	1362.3	0.106	+			7928	DSGTPAPEHNE	11	50	577.2410145952153	1152.4674762572306	2	577.2407836914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DSGTPAPEHNE_	ENSG00000168701|ENST00000304800|TMEM208;ENST00000562235.5_1_16:67262534-67263013:+|nuORF;ENST00000563271.5_1_16:67262538-67263013:+|nuORF;ENST00000567193.5_1_16:67262538-67263013:+|nuORF	16.71738777980365	0.7922119881075679	2				NaN	NaN	0	NaN	1183	2422	3602
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3608	14.631	NaN	9329.5	30	0	1544.2	0.106			+	31513	QLFNLGLGRA	10	60	544.8121948242188	NaN	0	544.8121948242188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QLFNLGLGRA_	REV__CON__ENSEMBL:ENSBTAP00000016285	49.44154591367651	0.30913310806145605	2				NaN	NaN	0	NaN	1184	2422	3602
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3609	14.633	NaN	8132.6	30	0	1147.8	0.038			+	-1	YICEVCSCGSE	11	40	625.2324629446331	1248.450372956066	2	625.7348022460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_YICEVCSC(Carbamidomethyl (C))GSE_	REV__chr15:53523322-53540662|232|17.27|0.17|6.68|-|2|TE_info:L1PA2,L1PA2_dup4399,L1,LINE,donor,+,53540662,53546677|WDR72,None|47	14.864876125193954	0.8008860636109596	2				NaN	NaN	0	NaN	1185	2422	3602
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3620	14.659	NaN	26417	30	0	3814.3	0.214	+			15156	GTSEVIHRK	9	83	513.7884772095147	1025.5624014858292	2	513.7885131835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTSEVIHRK_	ENSG00000169375|ENST00000394947|SIN3A	128.60217544463768	0.015992218256422188	2				NaN	NaN	0	NaN	1193	2425	3619
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3621	14.663	NaN	21952	30	0	4694.8	0.106			+	19677	KDPCYFAPI	9	68	527.2585190554014	1052.5024851776027	2	527.2589721679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KDPCYFAPI_	REV__ENSG00000138439|ENST00000392238|FAM117B	53.351449002276354	0.2690372970092375	2				NaN	NaN	0	NaN	1194	2425	3619
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3622	14.665	NaN	10717	30	0	2330	0.106	+			44673	TTHITKTVK	9	67	343.5416539035325	1027.6031323107975	3	343.5416564941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TTHITKTVK_	ENSG00000079819|ENST00000337057|EPB41L2;ENSG00000082397|ENST00000341928|EPB41L3;ENST00000368126.2_1_6:131179278-131186801:-|nuORF;ENST00000452150.6_1_6:131179278-131188835:-|nuORF;nc|ENSG00000079819|O43491-3|EPB41L2;nc|ENSG00000079819|O43491-4|EPB41L2;nc|ENSG00000082397|Q9Y2J2-2|EPB41L3;nc|ENSG00000082397|Q9Y2J2-4|EPB41L3	41.42661286455405	0.403525789677298	2				NaN	NaN	0	NaN	1195	2425	3619
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3623	14.667	NaN	22679	30	0	5679.3	0.106	+			3752	ATAEKCLHK	9	85	500.76602384459704	999.5174947559941	2	500.7661437988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATAEKCLHK_	ENSG00000180098|ENST00000373830|TRNAU1AP;ENST00000464880.5_1_1:28879622-28887433:+|nuORF;ENST00000480930.5_1_1:28879622-28887666:+|nuORF;ENST00000484775.1_1_1:28887181-28904036:+|nuORF;ENST00000491577.5_1_1:28879622-28887259:+|nuORF;ENST00000495995.5_1_1:28880088-28887666:+|nuORF;TRNAU1AP|p.Q222Sfs*29|1|0.24|ENSG00000180098|chr1:28571305-28571305|C/-|frameshift_variant	67.49366992349736	0.1516260258713357	2				NaN	NaN	0	NaN	1196	2425	3619
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3624	14.668	NaN	8962.1	30	0	3148	0.106				-1	 	0	49	345.8375113139583	1034.490704542075	3	345.8377380371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1197	2425	3619
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3625	14.67	NaN	5569.1	30	0	1209.5	0.106	+			15981	HAKDTGEGY	9	68	489.22017814743765	976.4258033616753	2	489.2200927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HAKDTGEGY_	ENSG00000138078|ENST00000409411|PREPL;nc|ENSG00000138078|Q4J6C6-2|PREPL;nc|ENSG00000138078|Q4J6C6-3|PREPL;nc|ENSG00000138078|Q4J6C6|PREPL	62.107414245175825	0.1960472003779324	2				NaN	NaN	0	NaN	1198	2425	3619
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3626	14.672	NaN	7849	30	0	3964.2	0.037	+			32417	QVGLKGQPAII	11	48	375.23264991123006	1122.6761203338901	3	375.23272705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QVGLKGQPAII_	ENST00000437039.1_1_2:179319678-179320041:+|nuORF	32.75053402867276	0.6462648045997152	2				NaN	NaN	0	NaN	1199	2425	3619
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3637	14.698	NaN	18266	30	0	2665.7	0.214	+			38704	SSKSQTEVPK	10	76	545.7907875562137	1089.5670221792273	2	545.7911987304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSKSQTEVPK_	chr10:128113602-128116491|398|11.56|0.71|4.03|-|ENST00000368653|MKI67,MKI67;ENSG00000148773|ENST00000368654|MKI67;MKI67|p.L2374*|1|0.28|ENSG00000148773|chr10:128104719-128104719|A/-|frameshift_variant;MKI67|p.L783Hfs*49|1|0.05|ENSG00000148773|chr10:128110447-128110448|-/TG|frameshift_variant;MKI67|p.L783Yfs*49|1|0.05|ENSG00000148773|chr10:128110446-128110447|-/GT|frameshift_variant;MKI67|p.R3036Yfs*27|1|0.04|ENSG00000148773|chr10:128102735-128102736|-/AAAATAA|frameshift_variant;MKI67|p.T672Nfs*4|1|0.25|ENSG00000148773|chr10:128112000-128112001|-/T|frameshift_variant;nc|ENSG00000148773|P46013-2|MKI67	167.93327368760816	0.004342583126626421	2				NaN	NaN	0	NaN	1207	2428	3636
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3638	14.701	NaN	11739	30	0	1693.3	0.106			+	21221	KLGFTNKK	8	62	468.2875162711086	934.5604796090172	2	468.2872619628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KLGFTNKK_	REV__ENST00000414423.6_1_1:224575719-224575878:-|nuORF	101.60071028292904	0.24979566554663588	2				NaN	NaN	0	NaN	1208	2428	3636
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3639	14.703	NaN	5150.7	30	0	712.96	0.106	+			9202	EGRITPEL	8	56	457.750949821224	913.4873467092481	2	457.75103759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EGRITPEL_	ENSG00000156515|ENST00000359426|HK1;ENST00000494253.1_1_10:71098016-71144300:+|nuORF;nc|ENSG00000156515|P19367-2|HK1;nc|ENSG00000156515|P19367-3|HK1;nc|ENSG00000156515|P19367-4|HK1	44.116797842482775	0.6307669463330267	2				NaN	NaN	0	NaN	1209	2428	3636
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3640	14.705	NaN	16510	30	0	1979.4	0.106			+	1937	AISKRPGARR	10	75	556.3454910733444	1110.6764292134887	2	556.34619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AISKRPGARR_	REV__ENST00000606965.5_1_6:158535743-158540110:-|nuORF	75.04331003522576	0.23611669241777622	2				NaN	NaN	0	NaN	1210	2428	3636
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3641	14.707	NaN	12054	30	0	835.52	0.106			+	34062	RSNKINSPPKQ	11	86	423.5739453717802	1267.7000067155407	3	423.57366943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RSNKINSPPKQ_	REV__ENSG00000010219|ENST00000543431|DYRK4;REV__ENST00000539309.5_1_12:4677127-4699979:+|nuORF;REV__nc|ENSG00000010219|Q9NR20-3|DYRK4;REV__nc|ENSG00000010219|Q9NR20-4|DYRK4	79.07001860377117	0.16012584326255155	2				NaN	NaN	0	NaN	1211	2428	3636
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3642	14.709	NaN	3794.8	30	0	375.45	0.106	+			30	AAAKPTPPK	9	70	440.76623807814445	879.5179232230889	2	440.7660217285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AAAKPTPPK_	ENSG00000159140|ENST00000356577|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-4|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-7|SON;nc|ENSG00000159140|P18583-9|SON	78.26377905018397	0.10505600812668463	2				NaN	NaN	0	NaN	1212	2428	3636
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3643	14.711	NaN	8768.9	30	0	1404.6	0.036				-1	KCGAGCSCKGA	11	65	549.727203269506	1097.439853605812	2	549.72705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C)	_KC(Carbamidomethyl (C))GAGC(Carbamidomethyl (C))SCKGA_	ENST00000491671.1_1_22:45705316-45705999:+|nuORF	39.252832667884924	0.5681665794958463	2				NaN	NaN	0	NaN	1213	2428	3636
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3657	14.74	NaN	15372	30	0	3179.1	0.214				-1	 	0	66	411.5907908213271	1231.7505430641813	3	411.5904846191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1224	2431	3656
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3658	14.744	NaN	6175.5	30	0	2488.7	0.106	+			7641	DKNGTSLDIK	10	60	364.195975640348	1089.566097521244	3	364.1961364746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DKNGTSLDIK_	tr|U7SZG0|U7SZG0_FUSNUAutotransporterdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00737PE=4SV=1	30.317721548370564	0.6322445173429027	2				NaN	NaN	0	NaN	1225	2431	3656
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3659	14.746	NaN	16025	30	0	3042.2	0.106	+			6242	AVSEHRLSNK	10	87	570.810092463676	1139.605631994152	2	570.8101196289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVSEHRLSNK_	ENSG00000104960|ENST00000391842|PTOV1;ENST00000598632.5_1_19:50354098-50358367:+|nuORF;ENST00000601501.5_1_19:50354350-50358367:+|nuORF;ENST00000602040.5_1_19:50354666-50357992:+|nuORF;nc|ENSG00000104960|Q86YD1-2|PTOV1	147.30332882356183	0.008974348998861759	2				NaN	NaN	0	NaN	1226	2431	3656
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3660	14.748	NaN	9741.6	30	0	1826	0.106			+	32411	QVFKLLTSLAL	11	76	616.8823430594729	NaN	0	616.8823852539062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QVFKLLTSLAL_	REV__NOC4L|p.A121T|1|0.23|ENSG00000184967|chr12:132147296-132147296|G/A|missense_variant	68.62578634547417	0.1499985929117389	2				NaN	NaN	0	NaN	1227	2431	3656
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3661	14.75	NaN	7943.1	30	0	1414	0.106			+	10143	ESSACIWQN	9	71	547.7338977798975	1093.4532426265948	2	547.734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_ESSAC(Carbamidomethyl (C))IWQN_	REV__ENST00000376936.8_1_1:11136965-11137468:-|nuORF	60.97194046774394	0.20551255781574032	2				NaN	NaN	0	NaN	1228	2431	3656
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3662	14.751	NaN	10027	30	0	1517.1	0.034	+			31629	QMGPRRLS	8	82	472.76035680085977	943.5061606685196	2	473.2589111328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QMGPRRLS_	ENST00000532045.5_1_11:834538-836571:+|nuORF	58.78195531508484	0.5138399468736706	2				NaN	NaN	0	NaN	1229	2431	3656
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3663	14.752	NaN	9296.4	30	0	1770.2	0.141				-1	DKDSCMLKC	9	62	558.2302160543222	1114.4458791754444	2	557.7700805664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C),Oxidation (M)	_DKDSCM(Oxidation (M))LKC(Carbamidomethyl (C))_	ENSG00000113108|ENST00000357560|APBB3;ENST00000509914.5_1_5:139938172-139941496:-|nuORF;ENST00000515056.5_1_5:139938172-139941333:-|nuORF;nc|ENSG00000113108|O95704-2|APBB3;nc|ENSG00000113108|O95704-3|APBB3;nc|ENSG00000113108|O95704-4|APBB3	26.69291269510374	0.5537881896960711	2				NaN	NaN	0	NaN	1230	2431	3656
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3677	14.783	NaN	11656	30	0	1586.4	0.214	+			43016	TEKRSTVAC	9	72	497.752893192791	993.4912334523821	2	497.75286865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEKRSTVAC_	ENSG00000112799|ENST00000230568|LY86	52.936696900407355	0.27249468807391813	2				NaN	NaN	0	NaN	1241	2434	3676
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3678	14.787	NaN	19181	30	0	3899.7	0.106	+			4266	ATGGDITRNK	10	81	516.7752457671462	NaN	0	516.7753295898438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATGGDITRNK_	ENSG00000172939|ENST00000311806|OXSR1;ENST00000426620.5_1_3:38234779-38271948:+|nuORF	120.30596017624542	0.018890087788199523	2				NaN	NaN	0	NaN	1242	2434	3676
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3679	14.789	NaN	8067.9	30	0	2027.9	0.106	+			42605	TATAVAHCK	9	65	451.23144002848096	NaN	0	451.23138427734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TATAVAHCK_	chr19:39435705-39435848|468|276.17|0.0|24.72|-|0|RPS16,RPS16|1;ENSG00000105193|ENST00000251453|RPS16;ENST00000601390.1_1_19:39926180-39926535:-|nuORF	93.19546047674547	0.03515475374905802	2				NaN	NaN	0	NaN	1243	2434	3676
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3680	14.791	NaN	6224.7	30	0	2912.2	0.106	+			5940	AVLKGVHSHK	10	61	359.2169599330824	1074.6290503994474	3	359.21710205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVLKGVHSHK_	ENSG00000198242|ENST00000422514|RPL23A;ENST00000582736.1_1_17:27047023-27047984:+|nuORF	64.20726635412375	0.3275756395432415	2				NaN	NaN	0	NaN	1244	2434	3676
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3681	14.793	NaN	9774	30	0	2198.4	0.106	+			27929	MVCTDSREQKL	11	55	655.3161393182122	1308.6177257032243	2	655.316162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MVCTDSREQKL_	MLH1|p.R385C|1|0.18|ENSG00000076242|chr3:37025751-37025751|C/T|missense_variant	22.579656572578934	0.7529490144093228	2				NaN	NaN	0	NaN	1245	2434	3676
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3682	14.794	NaN	7658.1	30	0	1239.1	0.034	+			22426	KTLAEHQQ	8	61	477.7536295987714	NaN	0	477.7536315917969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KTLAEHQQ_	ENSG00000116750|ENST00000367454|UCHL5;nc|ENSG00000116750|Q9Y5K5-2|UCHL5;nc|ENSG00000116750|Q9Y5K5-4|UCHL5;nc|ENSG00000116750|Q9Y5K5|UCHL5	85.16082228582465	1.7418937515398478	2				NaN	NaN	0	NaN	1246	2434	3676
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3683	14.795	NaN	10078	30	0	1529.6	0.14				-1	IPACSIHCM	9	77	524.2255420011999	1046.4365310691996	2	524.2845458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C),Oxidation (M)	_IPAC(Carbamidomethyl (C))SIHCM(Oxidation (M))_	ENST00000274400.9_1_5:70331474-70331507:-|nuORF	50.0245360154114	0.3026755932229825	2				NaN	NaN	0	NaN	1247	2434	3676
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3698	14.828	NaN	916350	30	0	147890	0.091	+			3655	ASYGVSKGK	9	81	448.74518498045376	895.4758170277075	2	448.7456359863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASYGVSKGK_	ENSG00000153187|ENST00000640218|HNRNPU;nc|ENSG00000153187|Q00839-2|HNRNPU	123.20810148215591	0.019257656778428764	2				NaN	NaN	0	NaN	1259	2437	3697
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3699	14.829	NaN	94592	30	0	55775	0.106			+	9107	EGKSGTEGR	9	55	460.7245948402331	919.4346367472663	2	460.7242126464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EGKSGTEGR_	REV__COL7A1|p.E2208Sfs*12|1|0.12|ENSG00000114270|chr3:48573345-48573345|C/-|frameshift_variant;REV__COL7A1|p.G2177Wfs*113|1|0.1|ENSG00000114270|chr3:48573864-48573865|-/G|frameshift_variant;REV__COL7A1|p.P1990Qfs*15|1|0.14|ENSG00000114270|chr3:48575636-48575636|G/-|frameshift_variant;REV__COL7A1|p.P2029Lfs*177|2|0.43|ENSG00000114270|chr3:48575438-48575438|G/-|frameshift_variant;REV__COL7A1|p.P2298Lfs*90|1|0.18|ENSG00000114270|chr3:48572678-48572678|G/-|frameshift_variant;REV__COL7A1|p.S2715Vfs*71|1|0.4|ENSG00000114270|chr3:48566991-48566991|G/-|frameshift_variant;REV__ENSG00000114270|ENST00000681320|COL7A1;REV__ENST00000487017.5_1_3:48609337-48621784:-|nuORF;REV__nc|ENSG00000114270|Q02388-2|COL7A1	35.61828744233558	0.47037581924408073	2				NaN	NaN	0	NaN	1260	2437	3697
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3700	14.831	NaN	36556	30	0	13539	0.106	+			15097	GTQIHKVCK	9	88	507.28141936322885	1012.5482857932577	2	507.281494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTQIHKVCK_	ENST00000594085.5_1_19:40854624-40871501:+|nuORF	141.52041321563706	0.009766778904176347	2				NaN	NaN	0	NaN	1261	2437	3697
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3701	14.833	NaN	38578	30	0	6262.6	0.106	+			33036	REKDTVKKL	9	80	558.8402518943483	1115.6659508554965	2	558.8405151367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_REKDTVKKL_	ENSG00000125844|ENST00000377813|RRBP1;nc|ENSG00000125844|Q9P2E9-3|RRBP1	109.43880257439609	0.029570636687953285	2				NaN	NaN	0	NaN	1262	2437	3697
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3702	14.835	NaN	16211	30	0	5914.4	0.106	+			15098	GTQIHKVCK	9	69	338.52326179324893	1012.5479559799469	3	338.5234069824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTQIHKVCK_	ENST00000594085.5_1_19:40854624-40871501:+|nuORF	58.78195531508484	0.22376836668196862	2				NaN	NaN	0	NaN	1263	2437	3697
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3703	14.837	NaN	15964	30	0	2271.4	0.106				-1	EEAMETTPA	9	64	497.7058116444894	993.3970703557789	2	497.7056884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_EEAM(Oxidation (M))ETTPA_	ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232323706-232327997:-|nuORF	33.51558372728122	0.4900267029546261	2				NaN	NaN	0	NaN	1264	2437	3697
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3704	14.839	NaN	27952	30	0	6885.3	0.106	+			19246	KADDMSDDQ	9	72	520.697774632033	NaN	0	520.6976928710938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_KADDM(Oxidation (M))SDDQ_	CHAF1A|p.A486Lfs*24|1|0.09|ENSG00000167670|chr19:4428742-4428742|G/-|frameshift_variant;CHAF1A|p.K459Rfs*51|1|0.22|ENSG00000167670|chr19:4423867-4423867|C/-|frameshift_variant;ENSG00000167670|ENST00000301280|CHAF1A;nc|ENSG00000167670|Q13111-2|CHAF1A;nc|ENSG00000167670|Q13111-3|CHAF1A	58.22992032128504	0.15686832049467786	2				NaN	NaN	0	NaN	1265	2437	3697
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3705	14.84	NaN	25737	30	0	10442	0.034	+			9919	EQSQGMQGP	9	66	481.205556647699	NaN	0	481.20556640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_EQSQGMQGP_	ENSG00000151414|ENST00000367385|NEK7;nc|ENSG00000151414|Q8TDX7-2|NEK7;NEK7|p.V65Sfs*5|1|0.24|ENSG00000151414|chr1:198253167-198253168|-/A|frameshift_variant	68.78682469695295	0.1118430353446351	2				NaN	NaN	0	NaN	1266	2437	3697
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3718	14.868	NaN	113690	30	0	23637	0.182	+			38940	SSQPLASKQEK	11	104	601.8224069904186	NaN	0	601.8223876953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSQPLASKQEK_	ENSG00000137309|ENST00000311487|HMGA1;nc|ENSG00000137309|P17096-2|HMGA1;nc|ENSG00000137309|P17096-3|HMGA1	144.69833601371718	2.1482351826736756E-05	2				NaN	NaN	0	NaN	1276	2440	3717
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3719	14.871	NaN	15629	30	0	3982.2	0.106	+			4952	ATQSPISKK	9	80	480.2794653117344	958.5443776902688	2	480.2794189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATQSPISKK_	ENSG00000132382|ENST00000254718|MYBBP1A;ENST00000574547.5_1_17:4442712-4447986:-|nuORF;ENST00000574934.5_1_17:4442712-4445225:-|nuORF;nc|ENSG00000132382|Q9BQG0-2|MYBBP1A	85.86182877749512	0.07653218437724067	2				NaN	NaN	0	NaN	1277	2440	3717
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3720	14.873	NaN	31788	30	0	5610.8	0.106	+			49249	VVNSPHRQYK	10	85	614.3338588598984	1226.6531647865968	2	614.3333740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVNSPHRQYK_	ENSG00000164933|ENST00000297578|SLC25A32	99.78786539795823	0.07832680346773438	2				NaN	NaN	0	NaN	1278	2440	3717
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3721	14.875	NaN	4371.8	30	0	495.64	0.106	+			34364	RTQKKYFAK	9	63	390.56452337896627	1168.6717407370988	3	390.5645751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RTQKKYFAK_	ENSG00000138674|ENST00000395310|SEC31A;nc|ENSG00000138674|O94979-10|SEC31A;nc|ENSG00000138674|O94979-2|SEC31A;nc|ENSG00000138674|O94979-3|SEC31A;nc|ENSG00000138674|O94979-4|SEC31A;nc|ENSG00000138674|O94979-6|SEC31A;nc|ENSG00000138674|O94979-7|SEC31A;nc|ENSG00000138674|O94979-8|SEC31A;nc|ENSG00000138674|O94979-9|SEC31A;SEC31A|p.P1058Qfs*62|1|0.4|ENSG00000138674|chr4:82827487-82827487|G/-|frameshift_variant	59.93077597824379	0.21419174904018318	2				NaN	NaN	0	NaN	1279	2440	3717
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3722	14.877	NaN	14562	30	0	2183.7	0.106			+	47019	VLADMEEFFPC	11	73	650.7826487906816	1299.5507446481631	2	650.783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VLADMEEFFPC_	REV__ENSG00000140265|ENST00000684362|ZSCAN29;REV__ENST00000566849.5_1_15:43653273-43656590:-|nuORF;REV__ENST00000570181.2_1_15:43656083-43656590:-|nuORF;REV__nc|ENSG00000140265|Q8IWY8-2|ZSCAN29;REV__nc|ENSG00000140265|Q8IWY8-3|ZSCAN29;REV__ZSCAN29|p.P548Qfs*5|1|0.53|ENSG00000140265|chr15:43363962-43363962|G/-|frameshift_variant	32.81241826257853	0.645615689454792	2				NaN	NaN	0	NaN	1280	2440	3717
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3723	14.879	NaN	17818	30	0	2268.4	0.106				-1	SSIRHMIRK	9	58	572.3243832165183	1142.6342134998365	2	572.3244018554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_SSIRHM(Oxidation (M))IRK_	ENSG00000108107|ENST00000344063|RPL28;nc|ENSG00000108107|P46779-2|RPL28;nc|ENSG00000108107|P46779-3|RPL28	31.529811441608018	0.5085848003137583	2				NaN	NaN	0	NaN	1281	2440	3717
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3724	14.881	NaN	7255.8	30	0	835.21	0.04				-1	GFLNWNEMQIT	11	65	684.8171328106871	1367.619712688174	2	684.8160400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_GFLNWNEM(Oxidation (M))QIT_	ENST00000602507.1_1_X:45629330-45629546:-|nuORF	29.170058357718403	0.683821074385409	2				NaN	NaN	0	NaN	1282	2440	3717
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3736	14.907	NaN	37470	30	0	6013.9	0.214	+			48210	VTAPPARNR	9	87	491.28319260569776	980.5518322781955	2	491.2829284667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTAPPARNR_	ENSG00000163320|ENST00000482016|CGGBP1	87.69643885390035	0.07135982304947239	2				NaN	NaN	0	NaN	1291	2443	3735
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3737	14.911	NaN	33717	30	0	13028	0.106	+			37671	SLRRAHLE	8	48	327.85761828213367	980.551025446601	3	327.85772705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLRRAHLE_	ENSG00000135090|ENST00000392533|TAOK3	25.450171626174864	0.7628259754767981	2				NaN	NaN	0	NaN	1292	2443	3735
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3738	14.913	NaN	12400	30	0	1563.3	0.106	+			3698	ATAAAVVPEQ	10	81	478.7558224156714	955.4970918981428	2	478.7556457519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATAAAVVPEQ_	BRINP2|p.A221Pfs*53|1|0.37|ENSG00000198797|chr1:177257372-177257372|G/-|frameshift_variant;BRINP2|p.Q261Sfs*6|1|0.21|ENSG00000198797|chr1:177276200-177276201|-/T|frameshift_variant;ENSG00000198797|ENST00000361539|BRINP2	49.536043120802724	0.461275219792494	2				NaN	NaN	0	NaN	1293	2443	3735
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3739	14.914	NaN	16818	30	0	3561.6	0.106	+			38966	SSRKNVFQ	8	46	322.5099998818179	964.5081702456538	3	322.51025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSRKNVFQ_	ARHGAP15|p.E149D|1|0.14|ENSG00000075884|chr2:143250573-143250573|A/C|missense_variant;ENSG00000075884|ENST00000295095|ARHGAP15;ENST00000552641.5_1_2:143913059-144194625:+|nuORF	38.80614096846853	0.6637206697844082	2				NaN	NaN	0	NaN	1294	2443	3735
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3740	14.916	NaN	12778	30	0	3162.7	0.106			+	48036	VSRSGEKLK	9	67	502.2983331656886	1002.5821133981772	2	502.29840087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSRSGEKLK_	REV__ENST00000530261.1_1_11:77851057-77860099:+|nuORF	49.536043120802724	0.308405419312776	2				NaN	NaN	0	NaN	1295	2443	3735
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3741	14.918	NaN	12942	30	0	2724.1	0.106	+			31126	QGAYFYLAG	9	59	495.240699820604	NaN	0	495.2406921386719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QGAYFYLAG_	ENSG00000188566|ENST00000684003|NDOR1;nc|ENSG00000188566|Q9UHB4-2|NDOR1;nc|ENSG00000188566|Q9UHB4-4|NDOR1	44.53106598305862	0.24438232876904814	2				NaN	NaN	0	NaN	1296	2443	3735
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3742	14.92	NaN	10194	30	0	1828.8	0.033			+	13758	GQEHAEVD	8	52	442.6907986440307	883.3670443548614	2	442.6905212402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GQEHAEVD_	REV__ENSG00000074201|ENST00000525428|CLNS1A	42.396135135203025	0.6414440140393314	2				NaN	NaN	0	NaN	1297	2443	3735
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3754	14.945	NaN	36662	30	0	12768	0.214			+	21769	KQRPQNPASV	10	71	562.811743177523	1123.608933421846	2	562.8119506835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KQRPQNPASV_	REV__ATP10D|p.L1148*|1|0.28|ENSG00000145246|chr4:47576846-47576846|T/-|frameshift_variant;REV__ATP10D|p.L617Cfs*41|2|0.28|ENSG00000145246|chr4:47557681-47557681|G/-|frameshift_variant;REV__ATP10D|p.L863*|1|0.21|ENSG00000145246|chr4:47560990-47560990|T/-|frameshift_variant;REV__ATP10D|p.L863Ffs*3|1|0.28|ENSG00000145246|chr4:47560989-47560990|-/T|frameshift_variant;REV__ENSG00000145246|ENST00000273859|ATP10D	66.42927471994793	0.3073667423445326	2				NaN	NaN	0	NaN	1306	2446	3753
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3755	14.948	NaN	11159	30	0	1455.4	0.106	+			1264	AESEKSQKL	9	79	510.27121318678695	1018.5278734403739	2	510.2719421386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AESEKSQKL_	ENSG00000137497|ENST00000393695|NUMA1;nc|ENSG00000137497|Q14980-2|NUMA1;nc|ENSG00000137497|Q14980-3|NUMA1;nc|ENSG00000137497|Q14980-4|NUMA1;NUMA1|p.K1766Rfs*2|1|0.39|ENSG00000137497|chr11:72007357-72007357|G/-|frameshift_variant;NUMA1|p.L1786Pfs*18|1|0.23|ENSG00000137497|chr11:72007295-72007296|-/G|frameshift_variant	66.96192283764107	0.15557981141143568	2				NaN	NaN	0	NaN	1307	2446	3753
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3756	14.95	NaN	28928	30	0	3743.8	0.106	+			48376	VTHHVSVTK	9	99	336.52564875593555	1006.5551168680067	3	336.5258483886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTHHVSVTK_	ENSG00000164828|ENST00000401592|SUN1;ENST00000413171.6_1_7:892397-912965:+|nuORF;ENST00000475971.5_1_7:893033-912965:+|nuORF;nc|ENSG00000164828|O94901-5|SUN1;nc|ENSG00000164828|O94901-6|SUN1;nc|ENSG00000164828|O94901-9|SUN1;SUN1|p.E739Gfs*27|1|0.41|ENSG00000164828|chr7:872532-872533|-/G|frameshift_variant	49.536043120802724	0.308405419312776	2				NaN	NaN	0	NaN	1308	2446	3753
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3757	14.952	NaN	18974	30	0	2253.2	0.106	+			22797	KVFGGTVHKK	10	84	550.8329626188736	NaN	0	550.8328857421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KVFGGTVHKK_	ENSG00000163655|ENST00000496455|GMPS;GMPS|p.S473Lfs*26|1|0.37|ENSG00000163655|chr3:155922281-155922281|T/-|frameshift_variant;nc|ENSG00000163655|P49915-2|GMPS	141.91077491472637	0.006064539351902275	2				NaN	NaN	0	NaN	1309	2446	3753
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3758	14.954	NaN	70203	30	0	11482	0.106	+			44852	TTTTTHITK	9	92	502.2749917039256	1002.5354304746512	2	502.27423095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TTTTTHITK_	ENSG00000079819|ENST00000337057|EPB41L2;ENSG00000082397|ENST00000341928|EPB41L3;ENST00000368126.2_1_6:131179278-131186801:-|nuORF;ENST00000452150.6_1_6:131179278-131188835:-|nuORF;nc|ENSG00000079819|O43491-3|EPB41L2;nc|ENSG00000079819|O43491-4|EPB41L2;nc|ENSG00000082397|Q9Y2J2-2|EPB41L3;nc|ENSG00000082397|Q9Y2J2-4|EPB41L3	148.6902309647307	0.00717441509122429	2				NaN	NaN	0	NaN	1310	2446	3753
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3759	14.956	NaN	11338	30	0	4756.6	0.106			+	34717	RVVPGAGA	8	64	363.71627306029615	725.4179931873923	2	363.7164306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RVVPGAGA_	REV__PANX2|p.A274V|1|0.62|ENSG00000073150|chr22:50177533-50177533|C/T|missense_variant	28.2542754592877	0.7411748056684583	2				NaN	NaN	0	NaN	1311	2446	3753
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3760	14.958	NaN	6368.6	30	0	730.5	0.033	+			13527	GLQVDGRK	8	58	436.75093078025094	NaN	0	436.7508239746094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GLQVDGRK_	tr|U7SXX9|U7SXX9_FUSNUAutotransporterdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00877PE=4SV=1	82.30502934623384	1.7418937515398478	2				NaN	NaN	0	NaN	1312	2446	3753
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3774	14.987	NaN	32776	30	0	4053.9	0.214	+			5093	ATSNVHMVKK	10	94	557.805922596068	1113.5972922589358	2	557.8063354492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSNVHMVKK_	ENSG00000197256|ENST00000586659|KANK2;ENST00000590400.1_1_19:11303345-11305238:-|nuORF;KANK2|p.P430Rfs*5|1|0.23|ENSG00000197256|chr19:11178681-11178681|G/-|frameshift_variant;nc|ENSG00000197256|Q63ZY3-2|KANK2;nc|ENSG00000197256|Q63ZY3-3|KANK2	150.15188659993407	0.008468567113416427	2				NaN	NaN	0	NaN	1323	2449	3773
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3775	14.99	NaN	22305	30	0	5383.5	0.106			+	1985	AKARTVPAPT	10	80	337.8695230475375	1010.5867397428125	3	337.8697509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AKARTVPAPT_	REV__ENSG00000167522|ENST00000301030|ANKRD11;REV__ENST00000330736.9_1_16:89334888-89371640:-|nuORF	40.05817265558897	0.5486090488315611	2				NaN	NaN	0	NaN	1324	2449	3773
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3776	14.992	NaN	28591	30	0	8995.7	0.106			+	12058	GAAEPPVRAC	10	65	514.2542238006125	1026.493894668025	2	514.2542724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_GAAEPPVRAC(Carbamidomethyl (C))_	REV__TYK2|p.L202Pfs*105|1|0.26|ENSG00000105397|chr19:10366441-10366442|-/G|frameshift_variant	40.77816245573522	0.5419747034533848	2				NaN	NaN	0	NaN	1325	2449	3773
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3777	14.994	NaN	31432	30	0	9312.7	0.106	+			44853	TTTTTHITK	9	76	335.1853683201332	1002.5342755605996	3	335.1855163574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TTTTTHITK_	ENSG00000079819|ENST00000337057|EPB41L2;ENSG00000082397|ENST00000341928|EPB41L3;ENST00000368126.2_1_6:131179278-131186801:-|nuORF;ENST00000452150.6_1_6:131179278-131188835:-|nuORF;nc|ENSG00000079819|O43491-3|EPB41L2;nc|ENSG00000079819|O43491-4|EPB41L2;nc|ENSG00000082397|Q9Y2J2-2|EPB41L3;nc|ENSG00000082397|Q9Y2J2-4|EPB41L3	41.42661286455405	0.403525789677298	2				NaN	NaN	0	NaN	1326	2449	3773
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3778	14.996	NaN	9614.6	30	0	1571.2	0.106	+			27187	MDTHGYSTR	9	60	534.2328491210938	NaN	0	534.2328491210938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MDTHGYSTR_	ENSG00000060656|ENST00000373779|PTPRU;nc|ENSG00000060656|Q92729-3|PTPRU;nc|ENSG00000060656|Q92729-4|PTPRU;nc|ENSG00000060656|Q92729|PTPRU;PTPRU|p.G852Afs*35|1|0.26|ENSG00000060656|chr1:29303898-29303898|G/-|frameshift_variant;TRNAU1AP-PTPRU|1|fusion;TRNAU1AP-PTPRU|2|fusion;TRNAU1AP-PTPRU|3|fusion	29.170058357718403	0.3302935627494407	2				NaN	NaN	0	NaN	1327	2449	3773
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3779	14.998	NaN	9469.9	30	0	1117.1	0.037	+			47638	VSASKVISTVK	11	62	373.564379928054	1117.671310384362	3	373.5645751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VSASKVISTVK_	nc|ENSG00000205853|P0C7P2|RFPL3S	44.639436926238396	0.4944613868569842	2				NaN	NaN	0	NaN	1328	2449	3773
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3780	14.999	NaN	10283	30	0	2023.3	0.143	+			33134	REREEREKL	9	62	622.838838617411	1243.663124301622	2	622.8392944335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_REREEREKL_	ENSG00000146963|ENST00000354926|LUC7L2;ENST00000463912.5_1_7:139083347-139097327:+|nuORF;nc|ENSG00000164898|Q96HJ9-2|FMC1;nc|ENSG00000269955|Q9Y383-2|LUC7L2;nc|ENSG00000269955|Q9Y383-3|LUC7L2;REV__EIF3A|p.M822T|1|0.07|ENSG00000107581|chr10:119050529-119050529|A/G|missense_variant;REV__ENSG00000107581|ENST00000369144|EIF3A;REV__nc|ENSG00000107581|Q14152-2|EIF3A	31.634271133179894	0.507608568980346	2				NaN	NaN	0	NaN	1329	2449	3773
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3794	15.03	NaN	9238.3	30	0	2562.5	0.214			+	29703	PHATGGSGSA	10	56	421.1933385124256	840.3721240916512	2	421.19293212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PHATGGSGSA_	REV__ENSG00000129646|ENST00000680821|QRICH2;REV__nc|ENSG00000129646|Q9H0J4-2|QRICH2;REV__nc|ENSG00000129646|Q9H0J4|QRICH2	21.9598887501803	0.7004979571547932	2				NaN	NaN	0	NaN	1340	2452	3793
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3795	15.034	NaN	24078	30	0	3255.6	0.106	+			34771	RYHSFSSKQD	10	92	627.7978995066154	1253.5812460800307	2	627.7987670898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RYHSFSSKQD_	ENST00000430801.5_1_7:77290551-77325505:-|nuORF	63.69406221917213	0.3322431690470481	2				NaN	NaN	0	NaN	1341	2452	3793
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3796	15.036	NaN	24118	30	0	2648.3	0.106	+			39617	STIATSHPK	9	84	471.2561460003613	940.4977390675226	2	471.2560119628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STIATSHPK_	ENSG00000007952|ENST00000372966|NOX1;nc|ENSG00000007952|Q9Y5S8-3|NOX1	139.97047562133406	0.010493916756945389	2				NaN	NaN	0	NaN	1342	2452	3793
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3797	15.037	NaN	23480	30	0	4090.4	0.106				-1	HDGDKYPMES	10	75	597.7396261831819	1193.4646994331638	2	597.7398681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_HDGDKYPM(Oxidation (M))ES_	ENSG00000136861|ENST00000349780|CDK5RAP2;nc|ENSG00000136861|Q96SN8-2|CDK5RAP2;nc|ENSG00000136861|Q96SN8-3|CDK5RAP2	54.776311868738084	0.41334902933431344	2				NaN	NaN	0	NaN	1343	2452	3793
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3798	15.039	NaN	5251.9	30	0	1057.3	0.106	+			2489	APRGPAGR	8	55	391.22511563785383	780.4356783425077	2	391.22515869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_APRGPAGR_	ENST00000354619.9_1_1:236433277-236445243:-|nuORF	57.81127852772723	0.5234495074909924	2				NaN	NaN	0	NaN	1344	2452	3793
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3799	15.041	NaN	11747	30	0	1789.2	0.036			+	-1	MATHGACQGN	10	66	531.7060928087989	NaN	0	531.705078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))ATHGAC(Carbamidomethyl (C))QGN_	REV__ENSG00000101752|ENST00000261537|MIB1;REV__ENST00000577749.5_1_18:19378098-19392361:+|nuORF;REV__MIB1-MYO5B|1|fusion	44.116797842482775	0.3427969396372342	2				NaN	NaN	0	NaN	1345	2452	3793
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3800	15.042	NaN	5038.4	30	0	1014.9	0.14			+	31374	QKESVYKK	8	54	505.28796746982687	1008.5613820064538	2	505.2876892089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QKESVYKK_	REV__nc|ENSG00000177640|Q6XLA1|CASC2	51.33545320467046	0.5859736979383976	2				NaN	NaN	0	NaN	1346	2452	3793
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3817	15.078	NaN	15469	30	0	2454.3	0.214	+			8135	EAAAGPLGCCR	11	63	524.2398583370126	1046.4651637408251	2	524.2399291992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EAAAGPLGCCR_	ENSG00000107643|ENST00000374189|MAPK8;ENST00000459755.1_1_10:49639201-49643069:+|nuORF;nc|ENSG00000107643|P45983-4|MAPK8	47.657333605630114	0.4531673460382624	2				NaN	NaN	0	NaN	1360	2455	3816
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3818	15.081	NaN	17769	30	0	2971.6	0.106	+			21844	KRHELWQE	8	76	563.2935561136796	1124.5725592941592	2	563.2938232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KRHELWQE_	ENSG00000075945|ENST00000361580|KIFAP3;KIFAP3|p.E347Gfs*10|1|0.14|ENSG00000075945|chr1:170016605-170016606|-/C|frameshift_variant;nc|ENSG00000075945|Q92845-2|KIFAP3;nc|ENSG00000075945|Q92845-3|KIFAP3;nc|ENSG00000075945|Q92845-4|KIFAP3	63.30626980617807	0.4690498839812213	2				NaN	NaN	0	NaN	1361	2455	3816
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3819	15.083	NaN	10886	30	0	2090.8	0.106	+			3934	ATASVVKEK	9	63	466.7741871361032	931.5338213390064	2	466.7738037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATASVVKEK_	ENSG00000160058|ENST00000455895|BSDC1;ENST00000474414.5_1_1:32849477-32859770:-|nuORF;ENST00000533084.1_1_1:32852298-32860015:-|nuORF;nc|ENSG00000160058|Q9NW68-2|BSDC1;nc|ENSG00000160058|Q9NW68-3|BSDC1;nc|ENSG00000160058|Q9NW68-5|BSDC1;nc|ENSG00000160058|Q9NW68-7|BSDC1;nc|ENSG00000160058|Q9NW68-8|BSDC1	167.22876102047192	0.0032399547248545047	2				NaN	NaN	0	NaN	1362	2455	3816
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3820	15.085	NaN	18063	30	0	4470.9	0.106	+			22372	KTIDASVSKK	10	72	538.8195007726515	1075.624448612103	2	538.8192749023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTIDASVSKK_	ENSG00000171681|ENST00000261168|ATF7IP;ENST00000535179.1_1_12:14619386-14628955:+|nuORF;ENST00000537653.5_1_12:14576849-14628955:+|nuORF;nc|ENSG00000171681|Q6VMQ6-2|ATF7IP;nc|ENSG00000171681|Q6VMQ6-4|ATF7IP;nc|ENSG00000171681|Q6VMQ6-5|ATF7IP	155.3343571090843	0.0075483822650960816	2				NaN	NaN	0	NaN	1363	2455	3816
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3821	15.087	NaN	14214	30	0	2460.4	0.106	+			4035	ATDDSKAVCR	10	81	533.2531973612593	1064.4918417893184	2	533.2535400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATDDSKAVCR_	ENSG00000115758|ENST00000234111|ODC1	106.88024417677582	0.05726438866303799	2				NaN	NaN	0	NaN	1364	2455	3816
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3822	15.089	NaN	7498.1	30	0	1072.3	0.034			+	33534	RLARSTGGP	9	71	457.7616264622237	NaN	0	457.7615966796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RLARSTGGP_	REV__ARHGEF17|p.M1011Sfs*2|1|0.32|ENSG00000110237|chr11:73311670-73311670|T/-|frameshift_variant;REV__ARHGEF17|p.P617Lfs*10|1|0.32|ENSG00000110237|chr11:73310482-73310482|C/-|frameshift_variant;REV__ENSG00000110237|ENST00000263674|ARHGEF17	58.78195531508484	0.1545138866451181	2				NaN	NaN	0	NaN	1365	2455	3816
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3823	15.089	NaN	4030.3	30	0	834.83	0.14			+	7183	DAGRHRRQ	8	61	498.2668151855469	NaN	0	498.2668151855469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DAGRHRRQ_	REV__ENST00000366919.6_1_6:161527714-161529788:+|nuORF	44.116797842482775	1.7418937515398478	2				NaN	NaN	0	NaN	1366	2455	3816
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3840	15.126	NaN	40684	30	0	6684.5	0.214	+			15508	GVCGKGFKK	9	85	490.770584509195	NaN	0	490.7706298828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GVC(Carbamidomethyl (C))GKGFKK_	ENSG00000167625|ENST00000301215|ZNF526	79.45101966838831	0.07326487554222888	2				NaN	NaN	0	NaN	1380	2458	3839
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3841	15.13	NaN	12147	30	0	1716.5	0.106	+			19281	KAFQATQQK	9	74	525.2906894628455	1048.566825992491	2	525.2905883789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KAFQATQQK_	ENSG00000145391|ENST00000274031|SETD7	150.36159442982594	0.006784847064083231	2				NaN	NaN	0	NaN	1381	2458	3839
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3842	15.132	NaN	26543	30	0	9620.7	0.106	+			15509	GVCGKGFKK	9	69	327.5164162541911	NaN	0	327.5163879394531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_GVC(Carbamidomethyl (C))GKGFKK_	ENSG00000167625|ENST00000301215|ZNF526	56.72105179125745	0.16330365735109603	2				NaN	NaN	0	NaN	1382	2458	3839
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3843	15.134	NaN	8834.5	30	0	1980.1	0.106			+	-1	NTPTKMAQHQ	10	71	586.282122082576	1170.549691231952	2	586.28076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_NTPTKM(Oxidation (M))AQHQ_	REV__ENSG00000132911|ENST00000255262|NMUR2;REV__NMUR2|p.L330Efs*27|1|0.05|ENSG00000132911|chr5:152392451-152392452|-/CCCTCTC|frameshift_variant	40.05817265558897	0.5486090488315611	2				NaN	NaN	0	NaN	1383	2458	3839
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3844	15.136	NaN	7006.5	30	0	1334.2	0.106			+	7427	DESPSRDGER	10	66	574.2511471743129	1146.4877414154257	2	574.2510986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DESPSRDGER_	REV__ENSG00000136878|ENST00000372429|USP20	28.081489160057373	0.6505064946289502	2				NaN	NaN	0	NaN	1384	2458	3839
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3845	15.137	NaN	2328.7	30	0	636.01	0.036			+	-1	EGKQCKKR	8	42	345.19052901081164	NaN	0	345.19049072265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_EGKQC(Carbamidomethyl (C))KKR_	REV__ENSG00000146374|ENST00000356698|RSPO3;REV__nc|ENSG00000146374|Q9BXY4-2|RSPO3;REV__PTPRK-RSPO3|1|fusion;REV__PTPRK-RSPO3|2|fusion;REV__RSPO3|p.P223Tfs*2|1|0.21|ENSG00000146374|chr6:127195847-127195848|-/A|frameshift_variant	34.172542307311794	1.7418937515398478	2				NaN	NaN	0	NaN	1385	2458	3839
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3846	15.138	NaN	2897.9	30	0	749.16	0.137	+			14006	GSETAGPPK	9	48	422.21425253359433	842.4139521339887	2	422.2137451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GSETAGPPK_	ENSG00000148296|ENST00000372022|SURF6	82.24051045832904	0.08786059719216216	2				NaN	NaN	0	NaN	1386	2458	3839
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3859	15.168	NaN	16562	30	0	1544.7	0.214	+			39189	SSYSQVRNK	9	80	534.7756707592977	1067.5367885853952	2	534.7761840820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSYSQVRNK_	ENSG00000068878|ENST00000404125|PSME4;nc|ENSG00000068878|Q14997-2|PSME4;nc|ENSG00000068878|Q14997-3|PSME4;PSME4|p.V1190Cfs*2|1|0.15|ENSG00000068878|chr2:53897908-53897909|-/A|frameshift_variant	136.26810882979174	0.012230845423532208	2				NaN	NaN	0	NaN	1396	2461	3858
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3860	15.171	NaN	14437	30	0	2455	0.106	+			5658	AVDPSSGHPR	10	74	511.753003598178	1021.491454263156	2	511.7545166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVDPSSGHPR_	ENSG00000164323|ENST00000458385|CFAP97	54.722347961057174	0.4138398245444204	2				NaN	NaN	0	NaN	1397	2461	3858
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3861	15.173	NaN	15766	30	0	2604.8	0.106				-1	 	0	70	499.7495056204438	997.4844583076876	2	499.74951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1398	2461	3858
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3862	15.175	NaN	58106	30	0	20739	0.106			+	43708	TKPATSSPVP	10	72	328.8499505506286	983.5280222520857	3	328.8502502441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TKPATSSPVP_	REV__ENSG00000131381|ENST00000253699|RBSN	31.529811441608018	0.6223461015008678	2				NaN	NaN	0	NaN	1399	2461	3858
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3863	15.177	NaN	6251.4	30	0	1215.1	0.106				-1	MLATANQH	8	39	451.2140060757461	900.4134592182922	2	451.2139587402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_M(Oxidation (M))LATANQH_	ENSG00000170927|ENST00000371117|PKHD1;nc|ENSG00000170927|P08F94-2|PKHD1;PKHD1|p.F1531Lfs*61|1|0.39|ENSG00000170927|chr6:52025217-52025217|A/-|frameshift_variant;PKHD1|p.H2893Pfs*2|1|0.4|ENSG00000170927|chr6:51754903-51754904|-/G|frameshift_variant;PKHD1|p.P1545Qfs*47|1|0.37|ENSG00000170927|chr6:52025176-52025176|G/-|frameshift_variant	19.359975847455235	0.7988239741663654	2				NaN	NaN	0	NaN	1400	2461	3858
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3864	15.179	NaN	8297.2	30	0	1081.4	0.106			+	21555	KNVVDQPP	8	69	448.74518498045376	895.4758170277075	2	448.74542236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KNVVDQPP_	REV__ENSG00000063169|ENST00000594866|BICRA	38.80614096846853	0.6637206697844082	2				NaN	NaN	0	NaN	1401	2461	3858
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3865	15.18	NaN	2128.7	30	0	631.9	0.035				-1	TGRAKRRM	8	31	331.1903189362763	990.5491274090289	3	331.19061279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_TGRAKRRM(Oxidation (M))_	ENSG00000149806|ENST00000529639|FAU	23.04248740728303	0.7814162927298575	2				NaN	NaN	0	NaN	1402	2461	3858
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3877	15.205	NaN	52932	30	0	20147	0.181				-1	GAFECVRK	8	69	504.7507645236694	1007.4869761141388	2	504.7505798339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))GAFEC(Carbamidomethyl (C))VRK_	ENSG00000114120|ENST00000324194|SLC25A36;ENST00000514629.1_1_3:140692546-140695292:+|nuORF;nc|ENSG00000114120|Q96CQ1-3|SLC25A36;nc|ENSG00000114120|Q96CQ1-4|SLC25A36;SLC25A36|p.G175Dfs*26|1|0.1|ENSG00000114120|chr3:140973782-140973782|A/-|frameshift_variant;SLC25A36|p.Q266Rfs*19|2|0.31|ENSG00000114120|chr3:140976306-140976306|T/-|frameshift_variant	52.29916861842294	0.578018602984656	2				NaN	NaN	0	NaN	1411	2464	3876
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3878	15.208	NaN	11634	30	0	3506.5	0.106	+			32228	QTEGLGIP	8	55	407.7190306344687	813.4235083357374	2	407.7187805175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QTEGLGIP_	ENST00000519948.3_1_12:74931642-74931807:+|nuORF	71.37791200682192	0.3954169775488141	2				NaN	NaN	0	NaN	1412	2464	3876
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3879	15.21	NaN	26742	30	0	5905.2	0.106			+	-1	TQMDHWSK	8	73	524.7302950135405	1047.446037093881	2	524.7294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_TQM(Oxidation (M))DHWSK_	REV__ENSG00000111907|ENST00000534000|TPD52L1;REV__ENST00000392483.6_1_6:125475019-125569560:+|nuORF;REV__ENST00000532978.5_1_6:125475518-125573183:+|nuORF;REV__nc|ENSG00000111907|Q16890-2|TPD52L1;REV__nc|ENSG00000111907|Q16890-3|TPD52L1;REV__nc|ENSG00000111907|Q16890-4|TPD52L1;REV__nc|ENSG00000111907|Q16890-5|TPD52L1	39.252832667884924	0.6609488554722044	2				NaN	NaN	0	NaN	1413	2464	3876
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3880	15.212	NaN	7922.2	30	0	1699.5	0.106	+			13465	GLKTKYEQ	8	62	322.8464885323409	965.5176361972228	3	322.8466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GLKTKYEQ_	ENSG00000275052|ENST00000616407|PPP4R3B;nc|ENSG00000275052|Q5MIZ7-2|PPP4R3B;nc|ENSG00000275052|Q5MIZ7-3|PPP4R3B;nc|ENSG00000275052|Q5MIZ7-5|PPP4R3B	35.200714571348534	0.6875396545722289	2				NaN	NaN	0	NaN	1414	2464	3876
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3881	15.214	NaN	32706	30	0	8901.4	0.106			+	-1	EMVKCLMKMTW	11	94	736.8426935101564	1471.6708340871128	2	736.8400268554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C),Oxidation (M)	_EMVKC(Carbamidomethyl (C))LMKM(Oxidation (M))TW_	REV__ENST00000495126.1_1_1:157765863-157765914:-|nuORF	30.317721548370564	0.6717830234747728	2				NaN	NaN	0	NaN	1415	2464	3876
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3882	15.215	NaN	12796	30	0	4131.1	0.106			+	35114	SAGLGVQIKK	10	70	334.20959392536906	999.6069523763072	3	334.20977783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SAGLGVQIKK_	REV__ENSG00000044090|ENST00000265348|CUL7;REV__nc|ENSG00000044090|Q14999-2|CUL7	19.1035232394073	0.7193765342308498	2				NaN	NaN	0	NaN	1416	2464	3876
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3883	15.217	NaN	5564.4	30	0	768.95	0.037	+			43118	TEREQKNSL	9	50	368.85944425345633	1103.556503360569	3	368.8595886230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TEREQKNSL_	BICD2|p.R258C|1|0.42|ENSG00000185963|chr9:92720590-92720590|G/A|missense_variant;ENSG00000185963|ENST00000356884|BICD2;nc|ENSG00000185963|Q8TD16|BICD2	39.252832667884924	0.4290233611298554	2				NaN	NaN	0	NaN	1417	2464	3876
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3884	15.218	NaN	16781	30	0	6095.8	0.141			+	16769	HNAEDDFGW	9	64	545.7137217250041	1089.4128905168081	2	545.7138061523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_HNAEDDFGW_	REV__ENSG00000150753|ENST00000280326|CCT5;REV__ENST00000423695.6_1_5:10250480-10261980:+|nuORF;REV__ENST00000509846.1_1_5:10258500-10261038:+|nuORF;REV__nc|ENSG00000150753|P48643-2|CCT5	38.80614096846853	0.43426287593479557	2				NaN	NaN	0	NaN	1418	2464	3876
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3896	15.246	NaN	37985	30	0	4527.4	0.214	+			6154	AVQEQMRSK	9	89	538.7794832736465	1075.544413614093	2	538.780029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVQEQMRSK_	ENSG00000197622|ENST00000357235|CDC42SE1	172.24860141594272	0.002383092361811508	2				NaN	NaN	0	NaN	1427	2467	3895
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3897	15.249	NaN	30697	30	0	3433.7	0.106	+			18959	IVQNGKHFK	9	78	535.8090147366484	1069.6034765400966	2	535.8093872070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IVQNGKHFK_	ENSG00000163586|ENST00000295834|FABP1	124.59426212874841	0.018418509520798258	2				NaN	NaN	0	NaN	1428	2467	3895
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3898	15.251	NaN	30795	30	0	3467.3	0.106	+			43618	TINGHNAEVRK	11	92	619.8336767052406	1237.652800477281	2	619.8339233398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TINGHNAEVRK_	ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;ENST00000495810.1_1_7:26235422-26236427:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1	114.71003974875822	0.030349694290893875	2				NaN	NaN	0	NaN	1429	2467	3895
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3899	15.253	NaN	22298	30	0	6215.1	0.106	+			34409	RTSSSRAVVVK	11	78	595.3542038984069	1188.6938548636138	2	595.3543701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RTSSSRAVVVK_	CON__H-INV:HIT000292931;CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	75.78808549251582	0.1874862790312707	2				NaN	NaN	0	NaN	1430	2467	3895
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3900	15.255	NaN	15566	30	0	1910.4	0.106	+			3914	ATARVMTNK	9	83	496.271066413714	990.527579894228	2	496.2712707519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATARVMTNK_	ENSG00000078328|ENST00000550418|RBFOX1;ENSG00000100320|ENST00000695854|RBFOX2;ENSG00000167281|ENST00000693108|RBFOX3;nc|ENSG00000078328|Q9NWB1-2|RBFOX1;nc|ENSG00000078328|Q9NWB1-3|RBFOX1;nc|ENSG00000078328|Q9NWB1-4|RBFOX1;nc|ENSG00000078328|Q9NWB1-5|RBFOX1;nc|ENSG00000100320|O43251-10|RBFOX2;nc|ENSG00000100320|O43251-2|RBFOX2;nc|ENSG00000100320|O43251-3|RBFOX2;nc|ENSG00000100320|O43251-4|RBFOX2;nc|ENSG00000100320|O43251-5|RBFOX2;nc|ENSG00000100320|O43251-6|RBFOX2;nc|ENSG00000100320|O43251-7|RBFOX2;nc|ENSG00000100320|O43251-8|RBFOX2;nc|ENSG00000100320|O43251-9|RBFOX2;nc|ENSG00000100320|O43251|RBFOX2;nc|ENSG00000167281|A6NFN3-2|RBFOX3;nc|ENSG00000167281|A6NFN3|RBFOX3;RBFOX1|p.T351Pfs*7|1|0.34|ENSG00000078328|chr16:7709106-7709106|C/-|frameshift_variant	143.37361013837676	0.008897369944672323	2				NaN	NaN	0	NaN	1431	2467	3895
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3901	15.257	NaN	9133.7	30	0	1392	0.106			+	25771	LSALHRER	8	75	491.28319260569776	980.5518322781955	2	491.2831115722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSALHRER_	REV__ENST00000538906.5_2_16:31084355-31084742:-|nuORF	90.36981228632155	0.27635063874291205	2				NaN	NaN	0	NaN	1432	2467	3895
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3902	15.259	NaN	8630.8	30	0	2239.6	0.034	+			4954	ATQTPVSNK	9	61	473.25378983089934	944.4930267285987	2	473.2534484863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATQTPVSNK_	ENSG00000137804|ENST00000559596|NUSAP1;nc|ENSG00000137804|Q9BXS6-2|NUSAP1;nc|ENSG00000137804|Q9BXS6-3|NUSAP1;nc|ENSG00000137804|Q9BXS6-4|NUSAP1;nc|ENSG00000137804|Q9BXS6-5|NUSAP1;nc|ENSG00000137804|Q9BXS6-6|NUSAP1	104.0567914643314	0.03506238181059741	2				NaN	NaN	0	NaN	1433	2467	3895
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3917	15.29	NaN	30609	30	0	6809.5	0.214	+			46157	VDSFKAKGA	9	76	461.7549607627809	921.4953685923618	2	461.7547302246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VDSFKAKGA_	CEP120|p.K738Rfs*29|2|0.21|ENSG00000168944|chr5:123377519-123377519|T/-|frameshift_variant;CEP120|p.L565*|1|0.38|ENSG00000168944|chr5:123385020-123385020|A/-|frameshift_variant;ENSG00000168944|ENST00000306467|CEP120;nc|ENSG00000168944|Q8N960-2|CEP120;nc|ENSG00000168944|Q8N960-3|CEP120	66.42927471994793	0.16001998865088202	2				NaN	NaN	0	NaN	1445	2470	3916
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3918	15.294	NaN	18616	30	0	2630.4	0.106				-1	 	0	79	345.2097652842833	1032.60746645305	3	345.20989990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1446	2470	3916
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3919	15.296	NaN	8151.3	30	0	1534.9	0.106	+			1387	AEVKKPAAA	9	69	442.76358299770936	883.5126130622187	2	442.76348876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEVKKPAAA_	ENSG00000149257|ENST00000358171|SERPINH1	79.71258880314673	0.09879134589249085	2				NaN	NaN	0	NaN	1447	2470	3916
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3920	15.298	NaN	3912.1	30	0	670.63	0.106				-1	MMAMDLGQ	8	57	464.68316650390625	NaN	0	464.68316650390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Oxidation (M)	_M(Oxidation (M))M(Oxidation (M))AMDLGQ_	ENST00000504549.5_1_5:179044980-179045154:-|nuORF	26.79610172149135	1.7418937515398478	2				NaN	NaN	0	NaN	1448	2470	3916
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3921	15.299	NaN	1892.1	30	0	468.82	0.106			+	-1	GDIMRKKQ	8	38	331.1832275390625	NaN	0	331.1832275390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_GDIM(Oxidation (M))RKKQ_	REV__ENST00000370068.5_1_1:107683518-107690770:+|nuORF;REV__ENST00000370071.6_1_1:107682646-107690770:+|nuORF;REV__ENST00000370076.2_1_1:107685885-107690770:+|nuORF;REV__ENST00000462149.1_1_1:107684008-107690770:+|nuORF	23.04248740728303	1.7418937515398478	2				NaN	NaN	0	NaN	1449	2470	3916
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3922	15.301	NaN	2341.4	30	0	222.34	0.036	+			26617	LVADVVQDVL	10	37	357.54148803980934	1069.602634719628	3	357.54168701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LVADVVQDVL_	ENSG00000101407|ENST00000373447|TTI1;TTI1|p.L924Wfs*37|2|0.15|ENSG00000101407|chr20:37999211-37999211|G/-|frameshift_variant	31.529811441608018	0.6223461015008678	2				NaN	NaN	0	NaN	1450	2470	3916
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3923	15.302	NaN	7998.3	30	0	1371.2	0.139	+			11434	FLVGQDNGP	9	63	473.7339019977229	NaN	0	473.7337951660156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FLVGQDNGP_	ENSG00000215440|ENST00000356091|NPEPL1;ENST00000527587.5_1_20:57268807-57288710:+|nuORF;ENST00000529976.5_1_20:57268807-57287813:+|nuORF;ENST00000530122.1_1_20:57266543-57280604:+|nuORF;nc|ENSG00000215440|Q8NDH3-2|NPEPL1;nc|ENSG00000215440|Q8NDH3-3|NPEPL1;nc|ENSG00000215440|Q8NDH3-4|NPEPL1;nc|ENSG00000215440|Q8NDH3-5|NPEPL1	40.77816245573522	0.2702456086868081	2				NaN	NaN	0	NaN	1451	2470	3916
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3938	15.335	NaN	33327	30	0	4101.8	0.214	+			4380	ATHAGLYRK	9	90	508.7854356815509	1015.5563184299018	2	508.78521728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATHAGLYRK_	ENSG00000039650|ENST00000322344|PNKP;ENST00000593706.3_1_19:50365412-50367307:-|nuORF;ENST00000593946.5_1_19:50364507-50370327:-|nuORF;ENST00000594661.5_1_19:50364507-50367546:-|nuORF;nc|ENSG00000039650|Q96T60-2|PNKP	79.71258880314673	0.09879134589249085	2				NaN	NaN	0	NaN	1463	2473	3937
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3939	15.339	NaN	11963	30	0	1836.2	0.106	+			21151	KKTLSWAGPG	10	75	522.7936123396331	NaN	0	522.7935791015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KKTLSWAGPG_	ENST00000257940.6_1_12:56512934-56514437:+|nuORF	64.20726635412375	0.1999210135493042	2				NaN	NaN	0	NaN	1464	2473	3937
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3940	15.341	NaN	14090	30	0	1367.9	0.106	+			48866	VVDAHVREK	9	78	526.7961726277599	1051.5777923223197	2	526.7962646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVDAHVREK_	ENSG00000113595|ENST00000231524|TRIM23;ENST00000508808.1_1_5:64902931-64905219:-|nuORF;nc|ENSG00000113595|P36406-2|TRIM23;nc|ENSG00000113595|P36406-3|TRIM23	85.86182877749512	0.07653218437724067	2				NaN	NaN	0	NaN	1465	2473	3937
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3941	15.343	NaN	11323	30	0	1221.1	0.106			+	30714	QDGPEKKKR	9	78	543.306851934593	1084.599150935986	2	543.3069458007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QDGPEKKKR_	REV__CHD6|p.I2312Sfs*13|1|0.15|ENSG00000124177|chr20:41415191-41415191|T/-|frameshift_variant;REV__CHD6|p.N481Tfs*10|1|0.23|ENSG00000124177|chr20:41490016-41490016|T/-|frameshift_variant;REV__ENSG00000124177|ENST00000373233|CHD6;REV__nc|ENSG00000124177|Q8TD26-2|CHD6;REV__nc|ENSG00000124177|Q8TD26-3|CHD6	70.8162118820467	0.13725933411854815	2				NaN	NaN	0	NaN	1466	2473	3937
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3942	15.344	NaN	3534.6	30	0	420.92	0.106				-1	GVLRMAPMQL	10	43	377.8715622910333	NaN	0	377.87152099609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_GVLRMAPM(Oxidation (M))QL_	ENSG00000183246|ENST00000433039|RIMBP3C;ENSG00000274600|ENST00000620804|RIMBP3B;ENSG00000275793|ENST00000619918|RIMBP3;RIMBP3B|p.G1589Afs*9|1|0.16|ENSG00000274600|chr22:21388619-21388619|G/-|frameshift_variant	44.377184641726394	0.34115073642966565	2				NaN	NaN	0	NaN	1467	2473	3937
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3943	15.346	NaN	6689.4	30	0	1012.3	0.036	+			42956	TEKAKEERL	9	63	552.3066250323747	NaN	0	552.3065185546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TEKAKEERL_	ENSG00000149503|ENST00000394818|INCENP;INCENP|p.E620D|1|0.06|ENSG00000149503|chr11:62145652-62145652|G/T|missense_variant;nc|ENSG00000149503|Q9NQS7-2|INCENP	54.722347961057174	0.17414871455573902	2				NaN	NaN	0	NaN	1468	2473	3937
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3944	15.347	NaN	2325.9	30	0	330.35	0.14			+	32686	RAGGADPH	8	51	390.69036673344283	NaN	0	390.6903381347656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RAGGADPH_	REV__ENST00000544519.1_3_11:73022853-73058028:+|nuORF	33.51558372728122	1.7418937515398478	2				NaN	NaN	0	NaN	1469	2473	3937
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3956	15.374	NaN	18718	30	0	2857.4	0.214	+			3649	ASYGSTTTK	9	69	458.2244938260719	914.4344347189439	2	458.22430419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASYGSTTTK_	ENSG00000092108|ENST00000458591|SCFD1;ENST00000555259.5_1_14:31112578-31185169:+|nuORF;nc|ENSG00000092108|Q8WVM8-2|SCFD1;nc|ENSG00000092108|Q8WVM8-3|SCFD1	126.24258497203832	0.01742065577488747	2				NaN	NaN	0	NaN	1478	2476	3955
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3957	15.378	NaN	9892.9	30	0	2635.9	0.106	+			39756	STITKIHSK	9	67	338.8693463311914	1013.5862095937744	3	338.8695068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STITKIHSK_	ENSG00000138593|ENST00000559471|SECISBP2L;nc|ENSG00000138593|Q93073-2|SECISBP2L	34.172542307311794	0.4838870758800184	2				NaN	NaN	0	NaN	1479	2476	3955
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3958	15.38	NaN	13170	30	0	1598.9	0.106	+			44764	TTNQNVIKK	9	76	523.3037972318417	1044.5930415304833	2	523.3037719726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TTNQNVIKK_	ENSG00000121621|ENST00000263181|KIF18A;ENST00000526288.1_1_11:28119059-28119494:-|nuORF;ENST00000533466.1_1_11:28098218-28119398:-|nuORF;KIF18A|p.F80Lfs*23|1|0.23|ENSG00000121621|chr11:28097708-28097708|A/-|frameshift_variant;KIF18A|p.R666Kfs*29|1|0.12|ENSG00000121621|chr11:28036616-28036617|-/T|frameshift_variant	127.46168284122857	0.016682644177004526	2				NaN	NaN	0	NaN	1480	2476	3955
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3959	15.381	NaN	12871	30	0	2676.4	0.106	+			40866	SVFGKENKK	9	64	518.7928048718062	1035.5710568104123	2	518.7927856445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVFGKENKK_	ENSG00000024422|ENST00000263277|EHD2;ENSG00000103966|ENST00000220325|EHD4;ENST00000540884.1_1_19:48232905-48244686:+|nuORF;nc|ENSG00000024422|Q9NZN4-2|EHD2	101.25262130126117	0.03792372629710479	2				NaN	NaN	0	NaN	1481	2476	3955
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3960	15.383	NaN	6439.9	30	0	1497.1	0.106	+			39757	STITKIHSK	9	73	507.80084193399955	1013.5871309347991	2	507.8008117675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STITKIHSK_	ENSG00000138593|ENST00000559471|SECISBP2L;nc|ENSG00000138593|Q93073-2|SECISBP2L	45.02220120713402	0.3613509778819777	2				NaN	NaN	0	NaN	1482	2476	3955
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3961	15.385	NaN	101470	30	0	15122	0.106	+			40378	STTTTTHITK	10	113	545.790108893793	1089.565664854386	2	545.7910766601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STTTTTHITK_	ENSG00000079819|ENST00000337057|EPB41L2;ENSG00000082397|ENST00000341928|EPB41L3;ENST00000368126.2_1_6:131179278-131186801:-|nuORF;ENST00000452150.6_1_6:131179278-131188835:-|nuORF;nc|ENSG00000079819|O43491-3|EPB41L2;nc|ENSG00000079819|O43491-4|EPB41L2;nc|ENSG00000082397|Q9Y2J2-2|EPB41L3;nc|ENSG00000082397|Q9Y2J2-4|EPB41L3	152.06079943815163	0.008129625933261015	2				NaN	NaN	0	NaN	1483	2476	3955
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3962	15.387	NaN	19925	30	0	4203.5	0.036	+			31306	QIKKETAQI	9	76	529.8142970948142	NaN	0	529.8143310546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QIKKETAQI_	tr|U7SN87|U7SN87_FUSNUGlutamatemutaseepsilonsubunitOS=FusobacteriumnucleatumCTI-5OX=1316586GN=glmEPE=3SV=1	71.87747018426188	0.0992163553043454	2				NaN	NaN	0	NaN	1484	2476	3955
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3976	15.416	NaN	72829	30	0	5893	0.214	+			39558	STGGRTTITTK	11	109	561.8098583651556	1121.6051637971111	2	561.8098754882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STGGRTTITTK_	ENSG00000124429|ENST00000262753|POF1B;nc|ENSG00000124429|Q8WVV4-1|POF1B	86.18897241530135	0.11437590510873513	2				NaN	NaN	0	NaN	1495	2479	3975
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3977	15.42	NaN	7023.8	30	0	557.11	0.106	+			2663	AQNAKVIEK	9	74	500.7923045183169	999.5700561034338	2	500.792724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AQNAKVIEK_	ENSG00000018610|ENST00000644802|STEEP1;ENST00000469448.1_1_X:118673692-118676584:-|nuORF;nc|ENSG00000018610|Q9H5V9-2|STEEP1;nc|ENSG00000018610|Q9H5V9-3|STEEP1	129.42129120953632	0.01549634589885217	2				NaN	NaN	0	NaN	1496	2479	3975
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3978	15.422	NaN	15404	30	0	5864.6	0.106	+			41357	SVMAQVRQK	9	81	531.7902340652677	NaN	0	531.7901611328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_SVM(Oxidation (M))AQVRQK_	ENSG00000038358|ENST00000358933|EDC4;ENST00000572067.1_1_16:67917790-67918048:+|nuORF;nc|ENSG00000038358|Q6P2E9-2|EDC4	148.04295825190792	0.001563811321774451	2				NaN	NaN	0	NaN	1497	2479	3975
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3979	15.423	NaN	7046.7	30	0	1396.6	0.106	+			32061	QRYGMIRT	8	74	512.7721297280856	NaN	0	512.772216796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QRYGMIRT_	ENSG00000181333|ENST00000315765|HEPHL1	63.30626980617807	1.7418937515398478	2				NaN	NaN	0	NaN	1498	2479	3975
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3980	15.425	NaN	16184	30	0	2674	0.106	+			8621	ECVVCLERE	9	68	568.7594116285966	1135.504270323993	2	568.7598876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_ECVVC(Carbamidomethyl (C))LERE_	ENSG00000148356|ENST00000300417|LRSAM1;ENST00000483302.5_1_9:130248105-130265175:+|nuORF;nc|ENSG00000148356|Q6UWE0-2|LRSAM1;nc|ENSG00000148356|Q6UWE0-3|LRSAM1	60.11826168202944	0.21262886028301267	2				NaN	NaN	0	NaN	1499	2479	3975
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3981	15.427	NaN	11589	30	0	3666.3	0.036			+	30599	QAQGREIKQ	9	59	529.2908865515367	1056.5672201698733	2	529.2908325195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QAQGREIKQ_	REV__ENST00000206513.5_1_14:23588379-23588439:-|nuORF	24.519189625965996	0.574102787014149	2				NaN	NaN	0	NaN	1500	2479	3975
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3982	15.428	NaN	7493.6	30	0	1336.6	0.141			+	9224	EGSLVGDAFYA	11	52	564.7649828615541	1127.5154127899082	2	564.7648315429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EGSLVGDAFYA_	REV__ENSG00000123119|ENST00000417640|NECAB1;REV__ENST00000521954.1_1_8:91804195-91916096:+|nuORF	19.996771675451527	0.7768568223548057	2				NaN	NaN	0	NaN	1501	2479	3975
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3995	15.456	NaN	128690	30	0	24554	0.156	+			44588	TTCSKVFKK	9	99	549.8020252109686	1097.5894974887372	2	549.8021850585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_TTC(Carbamidomethyl (C))SKVFKK_	ENSG00000167625|ENST00000301215|ZNF526	150.36159442982594	0.006784847064083231	2				NaN	NaN	0	NaN	1511	2482	3994
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3996	15.459	NaN	31240	30	0	4473.7	0.106	+			15556	GVFKETKQK	9	74	532.8088326802806	1063.603112427361	2	532.8089599609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GVFKETKQK_	ENSG00000119927|ENST00000348367|GPAM	154.1183686248401	0.005909203230691971	2				NaN	NaN	0	NaN	1512	2482	3994
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3997	15.461	NaN	20067	30	0	2343.7	0.106	+			37174	SIYDSKRQSGK	11	85	634.8326398134301	1267.65072669366	2	634.8333740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SIYDSKRQSGK_	ENSG00000160710|ENST00000368474|ADAR;nc|ENSG00000160710|P55265-2|ADAR;nc|ENSG00000160710|P55265-3|ADAR;nc|ENSG00000160710|P55265-4|ADAR;nc|ENSG00000160710|P55265-5|ADAR	107.34388593462512	0.04550467081134512	2				NaN	NaN	0	NaN	1513	2482	3994
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3998	15.463	NaN	15377	30	0	1757.3	0.106	+			45946	VASAPWSWL	9	66	508.7632308846127	1015.5119088360254	2	508.76318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VASAPWSWL_	ENSG00000204267|ENST00000374897|TAP2;nc|ENSG00000204267|Q03519-2|TAP2;TAP2|p.K532Sfs*29|1|0.43|ENSG00000204267|chr6:32830307-32830307|T/-|frameshift_variant;TAP2|p.Q330Rfs*50|1|0.33|ENSG00000204267|chr6:32832783-32832783|C/-|frameshift_variant;TAP2|p.V467Lfs*2|1|0.15|ENSG00000204267|chr6:32830680-32830680|C/-|frameshift_variant	47.91560031466742	0.327412564698279	2				NaN	NaN	0	NaN	1514	2482	3994
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	3999	15.464	NaN	11444	30	0	1843.1	0.106	+			41816	SVSSPVKSK	9	72	459.76655143441155	917.5185499356231	2	459.76605224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVSSPVKSK_	ENSG00000174197|ENST00000703841|MGA;MGA|p.D2578Rfs*45|1|0.32|ENSG00000174197|chr15:41762342-41762343|-/A|frameshift_variant;MGA|p.E1249Rfs*25|2|0.28|ENSG00000174197|chr15:41729243-41729244|-/A|frameshift_variant;MGA|p.E1249Rfs*42|1|0.17|ENSG00000174197|chr15:41729244-41729244|A/-|frameshift_variant;MGA|p.H151Pfs*66|1|0.03|ENSG00000174197|chr15:41669345-41669346|-/CA|frameshift_variant;MGA|p.H151Vfs*67|1|0.05|ENSG00000174197|chr15:41669343-41669344|-/TGTTA|frameshift_variant;MGA|p.L1297Wfs*39|1|0.3|ENSG00000174197|chr15:41734566-41734566|C/-|frameshift_variant;MGA|p.N416Vfs*7|1|0.13|ENSG00000174197|chr15:41696254-41696257|CAAA/-|frameshift_variant;MGA|p.R155Efs*24|1|0.31|ENSG00000174197|chr15:41669352-41669353|-/G|frameshift_variant;MGA|p.R614Efs*7|1|0.35|ENSG00000174197|chr15:41696846-41696846|A/-|frameshift_variant;MGA|p.S2228Kfs*5|1|0.33|ENSG00000174197|chr15:41750284-41750285|-/A|frameshift_variant;MGA|p.T1916Qfs*7|1|0.4|ENSG00000174197|chr15:41749350-41749350|A/-|frameshift_variant;nc|ENSG00000174197|Q8IWI9-3|MGA;nc|ENSG00000174197|Q8IWI9|MGA	82.7504851949679	0.08565546331141553	2				NaN	NaN	0	NaN	1515	2482	3994
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4000	15.466	NaN	10077	30	0	1456.8	0.106	+			34271	RTITSKPSA	9	60	480.7767666952426	NaN	0	481.25091552734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RTITSKPSA_	ENST00000431485.2_3_7:99215826-99216222:+|nuORF;ENST00000481424.5_1_7:99214612-99216222:+|nuORF	56.72105179125745	0.16330365735109603	2				NaN	NaN	0	NaN	1516	2482	3994
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4001	15.468	NaN	10913	30	0	1579.3	0.034	+			20895	KIQTQTPR	8	72	486.285333635969	970.556114338738	2	486.2851867675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KIQTQTPR_	ENSG00000165929|ENST00000435962|TC2N	74.25504064058377	0.37144338840759816	2				NaN	NaN	0	NaN	1517	2482	3994
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4014	15.496	NaN	727090	30	0	220510	0.152	+			38690	SSKGPKRLE	9	112	334.52925047256775	1000.5659220179033	3	334.52947998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSKGPKRLE_	ENSG00000101134|ENST00000262593|DOK5	71.87747018426188	0.13267044672804276	2				NaN	NaN	0	NaN	1527	2485	4013
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4015	15.498	NaN	85918	30	0	9021	0.106			+	9200	EGRGEPEVR	9	114	514.7597106284078	1027.5048683236155	2	514.7595825195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EGRGEPEVR_	REV__ENST00000471517.5_1_19:38845366-38853372:+|nuORF	101.45984612302182	0.0377122763612125	2				NaN	NaN	0	NaN	1528	2485	4013
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4016	15.501	NaN	54771	30	0	20681	0.106	+			15604	GVISVPRQQ	9	89	328.5257909660204	982.5555434982612	3	328.5259094238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GVISVPRQQ_	nc|nan|Q8N9P6|C9orf163	47.657333605630114	0.33044192980041115	2				NaN	NaN	0	NaN	1529	2485	4013
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4017	15.502	NaN	20072	30	0	11507	0.106				-1	 	0	64	413.22709456116115	824.4396361891223	2	413.2264709472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1530	2485	4013
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4018	15.504	NaN	11219	30	0	2116.8	0.106				-1	 	0	64	495.21725306664564	494.20997660004565	1	496.2926025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1531	2485	4013
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4019	15.506	NaN	33941	30	0	16518	0.106			+	-1	MRPCDEATQ	9	61	554.2330767104371	1106.451600487674	2	554.2327270507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_MRPC(Carbamidomethyl (C))DEATQ_	REV__ENSG00000116721|ENST00000332296|PRAMEF1;REV__ENSG00000204481|ENST00000334600|PRAMEF14;REV__PRAMEF14|p.H283Afs*56|1|0.3|ENSG00000204481|chr1:13344057-13344058|-/C|frameshift_variant	44.377184641726394	0.36891676396732553	2				NaN	NaN	0	NaN	1532	2485	4013
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4020	15.508	NaN	10159	30	0	2745.2	0.034			+	24674	LGVTVEVVQ	9	67	472.27732046854186	942.5400880038837	2	472.3182067871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LGVTVEVVQ_	REV__CHRNA1|p.I123Ffs*67|2|0.31|ENSG00000138435|chr2:174757618-174757618|T/-|frameshift_variant;REV__ENSG00000138435|ENST00000348749|CHRNA1;REV__nc|ENSG00000138435|P02708-1|CHRNA1	58.78195531508484	0.22376836668196862	2				NaN	NaN	0	NaN	1533	2485	4013
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4021	15.508	NaN	30360	30	0	6116.8	0.14			+	31957	QQSPAPGISY	10	71	524.2593586626364	1046.5041643920727	2	524.259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_QQSPAPGISY_	REV__ENSG00000078070|ENST00000265594|MCCC1	31.529811441608018	0.6223461015008678	2				NaN	NaN	0	NaN	1534	2485	4013
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4035	15.538	NaN	90613	30	0	29330	0.172	+			32040	QRRSRHGE	8	65	513.2701466742164	1024.5257404152328	2	513.2703857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QRRSRHGE_	ENST00000436636.6_1_3:171177820-171177916:-|nuORF	53.351449002276354	0.5676011784961348	2				NaN	NaN	0	NaN	1545	2488	4034
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4036	15.541	NaN	89767	30	0	13447	0.106	+			40494	STYGVTKGK	9	100	470.7586403155942	939.5027276979885	2	470.7587585449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STYGVTKGK_	ENSG00000214753|ENST00000301785|HNRNPUL2	123.20810148215591	0.019257656778428764	2				NaN	NaN	0	NaN	1546	2488	4034
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4037	15.543	NaN	31158	30	0	3526.1	0.106	+			34098	RSQKPVMVK	9	100	358.2144913966718	1071.6216447902154	3	358.21478271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RSQKPVMVK_	ENSG00000108107|ENST00000344063|RPL28;ENST00000412461.2_1_22:19043875-19044022:+|nuORF;ENST00000560583.5_1_19:55899571-55899697:+|nuORF	63.42647028704847	0.1850514934184437	2				NaN	NaN	0	NaN	1547	2488	4034
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4038	15.545	NaN	11173	30	0	1171	0.106			+	21761	KQQKASPK	8	73	457.77459556350095	913.5346381938019	2	457.7744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KQQKASPK_	REV__ENSG00000163374|ENST00000355499|YY1AP1;REV__ENST00000436865.5_1_1:155629450-155649007:-|nuORF;REV__ENST00000496324.5_1_1:155642327-155650230:-|nuORF;REV__nc|ENSG00000163374|Q9H869-3|YY1AP1;REV__nc|ENSG00000163374|Q9H869-4|YY1AP1;REV__nc|ENSG00000163374|Q9H869-5|YY1AP1;REV__nc|ENSG00000163374|Q9H869-6|YY1AP1;REV__nc|ENSG00000163374|Q9H869-8|YY1AP1;REV__nc|ENSG00000163374|Q9H869-9|YY1AP1;REV__nc|ENSG00000163374|Q9H869|YY1AP1	101.60071028292904	0.24979566554663588	2				NaN	NaN	0	NaN	1548	2488	4034
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4039	15.547	NaN	14947	30	0	3202.1	0.106				-1	QEKMAGDQK	9	70	525.7495072464023	1049.4844615596046	2	525.7500610351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_QEKM(Oxidation (M))AGDQK_	ENSG00000131018|ENST00000367255|SYNE1;ENST00000367256.9_1_6:152443573-152639413:-|nuORF;nc|ENSG00000131018|Q8NF91-2|SYNE1;nc|ENSG00000131018|Q8NF91-4|SYNE1;nc|ENSG00000131018|Q8NF91-8|SYNE1;SYNE1|p.G6773Wfs*7|1|0.44|ENSG00000131018|chr6:152236186-152236187|-/A|frameshift_variant;SYNE1|p.K6871Rfs*22|2|0.52|ENSG00000131018|chr6:152233881-152233881|T/-|frameshift_variant;SYNE1|p.L8283Pfs*8|1|0.19|ENSG00000131018|chr6:152148173-152148174|-/G|frameshift_variant;SYNE1|p.V8635Sfs*12|1|0.15|ENSG00000131018|chr6:152133375-152133375|T/-|frameshift_variant	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	1549	2488	4034
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4040	15.549	NaN	15697	30	0	2697.5	0.106	+			30313	PTPKESPHF	9	59	520.2643566958783	1038.5141604585565	2	520.2647705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PTPKESPHF_	ENSG00000104369|ENST00000342232|JPH1	38.80614096846853	0.43426287593479557	2				NaN	NaN	0	NaN	1550	2488	4034
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4041	15.55	NaN	16110	30	0	2950.3	0.038				-1	RDFHSDMSAC	10	43	621.2363373900271	1240.458121846854	2	621.2371215820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C),Oxidation (M)	_RDFHSDM(Oxidation (M))SAC(Carbamidomethyl (C))_	PPP1R3A|p.T493M|1|0.36|ENSG00000154415|chr7:113879614-113879614|G/A|missense_variant	14.137123925751023	0.7446123510383054	2				NaN	NaN	0	NaN	1551	2488	4034
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4053	15.578	NaN	78518	30	0	9337.9	0.173	+			14334	GSYVTHETK	9	92	511.2512551017722	1020.4879572703444	2	511.2513122558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSYVTHETK_	ENSG00000088986|ENST00000242577|DYNLL1;ENSG00000264364|ENST00000579991|DYNLL2;ENST00000552316.1_1_12:120935833-120936010:+|nuORF	140.11223852658463	0.010427410095706195	2				NaN	NaN	0	NaN	1560	2491	4052
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4054	15.581	NaN	42709	30	0	7557.4	0.106	+			41330	SVLSGGKAK	9	73	423.75599666404906	845.4974403948981	2	423.7557373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVLSGGKAK_	ENSG00000130429|ENST00000646101|ARPC1B;ENST00000491294.1_1_7:98988810-98991817:+|nuORF	118.74307786436346	0.02196067127630568	2				NaN	NaN	0	NaN	1561	2491	4052
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4055	15.583	NaN	16475	30	0	4512.1	0.106				-1	TSRFAHVM	8	53	482.73750888640404	NaN	0	482.73748779296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_TSRFAHVM(Oxidation (M))_	COLGALT2|p.K158Nfs*9|1|0.18|ENSG00000198756|chr1:183975115-183975115|T/-|frameshift_variant;ENSG00000198756|ENST00000361927|COLGALT2	33.51558372728122	1.7418937515398478	2				NaN	NaN	0	NaN	1562	2491	4052
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4056	15.585	NaN	13991	30	0	3566.2	0.106			+	-1	MPDARLTQ	8	57	474.2345102743912	NaN	0	474.2347106933594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_M(Oxidation (M))PDARLTQ_	REV__ANKRD30A|p.S651Rfs*8|1|0.03|ENSG00000148513|chr10:37162796-37162797|-/AGATTTATCA|frameshift_variant;REV__ENSG00000148513|ENST00000361713|ANKRD30A	35.61828744233558	1.7418937515398478	2				NaN	NaN	0	NaN	1563	2491	4052
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4057	15.587	NaN	13589	30	0	2773	0.106			+	21521	KNQRELQQR	9	76	600.3360344470856	NaN	0	600.336181640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KNQRELQQR_	REV__ENSG00000100345|ENST00000216181|MYH9;REV__ENSG00000133026|ENST00000360416|MYH10;REV__ENSG00000133392|ENST00000300036|MYH11;REV__ENST00000475726.5_1_22:36680347-36682008:-|nuORF;REV__ENST00000486218.1_1_22:36680427-36682008:-|nuORF;REV__nc|ENSG00000100345|P35579-2|MYH9;REV__nc|ENSG00000133026|P35580-2|MYH10;REV__nc|ENSG00000133026|P35580-3|MYH10;REV__nc|ENSG00000133026|P35580-5|MYH10;REV__nc|ENSG00000133026|P35580|MYH10;REV__nc|ENSG00000133392|P35749-2|MYH11;REV__nc|ENSG00000133392|P35749-3|MYH11;REV__nc|ENSG00000133392|P35749-4|MYH11;REV__SYNDIG1-MYH9|1|fusion	74.25504064058377	0.09106938647426577	2				NaN	NaN	0	NaN	1564	2491	4052
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4058	15.589	NaN	27582	30	0	4859.9	0.106	+			38585	SSFYNTKKK	9	76	551.7982491659503	1101.5819453987006	2	551.7987060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSFYNTKKK_	ENSG00000169692|ENST00000371696|AGPAT2;ENST00000472820.1_1_9:139568206-139571631:-|nuORF;nc|ENSG00000169692|O15120-2|AGPAT2	132.757866228626	0.013877640931359021	2				NaN	NaN	0	NaN	1565	2491	4052
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4059	15.591	NaN	4880.4	30	0	546.52	0.035	+			7333	DAVQLFALT	9	62	489.2670022258551	NaN	0	489.266845703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DAVQLFALT_	ENSG00000128266|ENST00000615612|GNAZ;GNAZ|p.Q205Rfs*29|2|0.37|ENSG00000128266|chr22:23096301-23096301|G/-|frameshift_variant	75.04331003522576	0.0883683072398826	2				NaN	NaN	0	NaN	1566	2491	4052
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4074	15.623	NaN	15363	30	0	3270.7	0.214	+			5264	ATVDKTVCK	9	85	511.2710577465469	NaN	0	511.27099609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_ATVDKTVC(Carbamidomethyl (C))K_	ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1670Tfs*23|1|0.29|ENSG00000174231|chr17:1659487-1659487|C/-|frameshift_variant	90.60085204095205	0.040385177724871185	2				NaN	NaN	0	NaN	1578	2494	4073
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4075	15.626	NaN	19883	30	0	2468.6	0.106	+			40886	SVFKSARQK	9	73	525.8065424744946	1049.598532015789	2	525.8064575195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVFKSARQK_	ENSG00000080503|ENST00000349721|SMARCA2;nc|ENSG00000080503|P51531-2|SMARCA2	96.0336014099291	0.047854655524928534	2				NaN	NaN	0	NaN	1579	2494	4073
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4076	15.628	NaN	7999.8	30	0	1286.8	0.106			+	-1	KLSAVTMDPR	10	70	567.3027793899769	NaN	0	567.3026733398438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_KLSAVTM(Oxidation (M))DPR_	REV__ENSG00000125826|ENST00000356286|RBCK1;REV__ENST00000382181.2_2_20:389382-402830:+|nuORF;REV__nc|ENSG00000125826|Q9BYM8-3|RBCK1;REV__nc|ENSG00000125826|Q9BYM8-4|RBCK1;REV__RBCK1-CLCN7|1|fusion;REV__RBCK1-CLCN7|2|fusion	63.53385203322761	0.20542021811828953	2				NaN	NaN	0	NaN	1580	2494	4073
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4077	15.63	NaN	10290	30	0	1399.4	0.106	+			30232	PSSSSQLGLQ	10	82	502.25805188865945	1002.5015508441189	2	502.7587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PSSSSQLGLQ_	ENST00000421767.1_1_7:65842866-65843457:-|nuORF	36.446750945000026	0.5818864909973037	2				NaN	NaN	0	NaN	1581	2494	4073
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4078	15.632	NaN	28013	30	0	4915.7	0.106	+			14172	GSQAGGSQTLK	11	76	517.2674251161844	1032.5202972991688	2	517.2669067382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GSQAGGSQTLK_	ENSG00000125354|ENST00000394610|SEPTIN6;ENST00000467310.1_1_X:118753883-118767379:-|nuORF;ENST00000481072.1_1_X:118763279-118767388:-|nuORF;nc|ENSG00000125354|Q14141-4|SEPTIN6;nc|ENSG00000125354|Q14141|SEPTIN6	158.47086538638308	5.640651670997326E-05	2				NaN	NaN	0	NaN	1582	2494	4073
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4079	15.634	NaN	7458.6	30	0	974.02	0.035				-1	PMWLRGRGG	9	49	523.2722481397857	1044.5299433463713	2	523.2500610351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_PM(Oxidation (M))WLRGRGG_	ENST00000361264.8_1_9:34126412-34126766:-|nuORF	17.364965105453717	0.6112419832031293	2				NaN	NaN	0	NaN	1583	2494	4073
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4080	15.634	NaN	6320.6	30	0	966.92	0.141	+			29120	NTTNDIAHIQ	10	52	563.7773264484368	1125.5400999636736	2	563.7779541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NTTNDIAHIQ_	ENSG00000146938|ENST00000381095|NLGN4X;nc|ENSG00000146938|Q8N0W4-2|NLGN4X	36.446750945000026	0.5818864909973037	2				NaN	NaN	0	NaN	1584	2494	4073
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4092	15.663	NaN	42347	30	0	6599.9	0.214	+			38216	SQGPISKPK	9	103	471.2743384172139	940.5341239012279	2	471.27423095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SQGPISKPK_	BRD2|p.G595Vfs*6|1|0.59|ENSG00000204256|chr6:32978327-32978327|G/-|frameshift_variant;ENSG00000204256|ENST00000374825|BRD2;ENST00000463639.1_1_6:32945329-32946166:+|nuORF;nc|ENSG00000204256|P25440-2|BRD2;nc|ENSG00000204256|P25440-3|BRD2;nc|ENSG00000204256|P25440-4|BRD2	96.66504779109242	0.04607440320619715	2				NaN	NaN	0	NaN	1593	2497	4091
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4093	15.666	NaN	31191	30	0	6469.5	0.106				-1	 	0	82	554.2543926824567	1106.4942324317133	2	554.254638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1594	2497	4091
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4094	15.668	NaN	12325	30	0	1526.9	0.106	+			29973	PPALSHPG	8	73	388.2085290585897	774.4025051839794	2	388.20855712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PPALSHPG_	ENST00000539325.1_3_11:63994255-63994456:+|nuORF	21.70233525837049	0.7917639344264583	2				NaN	NaN	0	NaN	1595	2497	4091
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4095	15.67	NaN	11075	30	0	2404.8	0.106				-1	MLMLYFAH	8	60	529.2471907442192	NaN	0	529.2470703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Oxidation (M)	_M(Oxidation (M))LM(Oxidation (M))LYFAH_	ENSG00000151025|ENST00000376351|GPR158;ENST00000490549.1_1_10:25883203-25888200:+|nuORF;GPR158|p.A1124Lfs*2|1|0.07|ENSG00000151025|chr10:25598987-25598987|C/-|frameshift_variant;GPR158|p.K1143Rfs*23|1|0.32|ENSG00000151025|chr10:25599048-25599048|A/-|frameshift_variant	43.626045697637714	1.7418937515398478	2				NaN	NaN	0	NaN	1596	2497	4091
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4096	15.672	NaN	4830.7	30	0	1278.6	0.106			+	32836	RCPAEAQE	8	54	452.2040252857646	NaN	0	452.2035827636719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RCPAEAQE_	REV__ENSG00000181444|ENST00000302017|ZNF467	47.657333605630114	1.7418937515398478	2				NaN	NaN	0	NaN	1597	2497	4091
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4097	15.674	NaN	3493.4	30	0	896.83	0.106				-1	 	0	54	340.6953994199638	679.3762459067276	2	340.695556640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1598	2497	4091
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4098	15.676	NaN	4734.8	30	0	1521.9	0.033			+	35742	SDSIRQGS	8	34	425.2062535169	848.3979541006	2	425.2061462402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SDSIRQGS_	REV__ENSG00000124203|ENST00000371030|ZNF831	19.359975847455235	0.7988239741663654	2				NaN	NaN	0	NaN	1599	2497	4091
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4111	15.702	NaN	118310	30	0	27112	0.214	+			6235	AVSEGTKAVTK	11	107	545.8086699903063	1089.6027870474124	2	545.8092041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVSEGTKAVTK_	ENSG00000124635|ENST00000339812|H2BC11;ENSG00000146047|ENST00000274764|H2BC1;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000196890|ENST00000693095|H2BC26;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000369385.5_1_1:149814898-149814982:+|nuORF;ENST00000436555.1_1_1:228651916-228652012:-|nuORF;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;nc|ENSG00000203814|Q5QNW6-2|H2BC18;nc|ENSG00000285480|A0A2R8Y619|H2BK1	139.38205640894643	0.0005577063719173977	2				NaN	NaN	0	NaN	1609	2500	4110
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4112	15.706	NaN	24964	30	0	5317.8	0.106	+			13099	GGAESHTFK	9	94	467.22492832879425	932.4353037243885	2	467.2246398925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GGAESHTFK_	ENSG00000213145|ENST00000392531|CRIP1;ENST00000460900.1_1_14:105954779-105954845:+|nuORF;ENST00000496700.5_1_14:105954601-105954845:+|nuORF	127.46168284122857	0.016682644177004526	2				NaN	NaN	0	NaN	1610	2500	4110
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4113	15.708	NaN	30970	30	0	3572.9	0.106	+			31467	QKVQELQQ	8	91	500.7751545120487	999.5357560908974	2	500.776123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QKVQELQQ_	ENSG00000105357|ENST00000642316|MYH14;MYH14|p.L1950Sfs*14|1|0.34|ENSG00000105357|chr19:50309646-50309646|C/-|frameshift_variant;MYH14|p.M997*|1|0.19|ENSG00000105357|chr19:50271483-50271483|A/-|frameshift_variant;MYH14|p.R929Gfs*44|1|0.38|ENSG00000105357|chr19:50268237-50268237|G/-|frameshift_variant;nc|ENSG00000105357|Q7Z406-4|MYH14;nc|ENSG00000105357|Q7Z406-5|MYH14;nc|ENSG00000105357|Q7Z406-6|MYH14;nc|ENSG00000105357|Q7Z406|MYH14	82.24051045832904	0.30490469762271794	2				NaN	NaN	0	NaN	1611	2500	4110
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4114	15.71	NaN	12886	30	0	4097.6	0.106	+			19583	KDCLLTSVS	9	58	483.25327696280834	964.4920009924167	2	483.25323486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KDCLLTSVS_	ENSG00000166927|ENST00000300184|MS4A7;ENST00000528808.1_1_11:60150614-60157189:+|nuORF;nc|ENSG00000166927|Q9GZW8-2|MS4A7	51.33545320467046	0.2872990594074956	2				NaN	NaN	0	NaN	1612	2500	4110
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4115	15.712	NaN	8743.3	30	0	1529.8	0.106	+			14173	GSQAGGSQTLK	11	68	517.2674251161844	1032.5202972991688	2	518.2376098632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GSQAGGSQTLK_	ENSG00000125354|ENST00000394610|SEPTIN6;ENST00000467310.1_1_X:118753883-118767379:-|nuORF;ENST00000481072.1_1_X:118763279-118767388:-|nuORF;nc|ENSG00000125354|Q14141-4|SEPTIN6;nc|ENSG00000125354|Q14141|SEPTIN6	48.18798116849167	0.44590646720473764	2				NaN	NaN	0	NaN	1613	2500	4110
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4116	15.714	NaN	8503.1	30	0	1434.6	0.106	+			4193	ATFSSSHRYHK	11	64	660.8263549804688	NaN	0	660.8263549804688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATFSSSHRYHK_	ENSG00000138674|ENST00000395310|SEC31A;ENST00000436790.6_1_4:83784452-83812260:-|nuORF;ENST00000506497.5_1_4:83799153-83812260:-|nuORF;ENST00000507867.5_1_4:83798919-83812260:-|nuORF;nc|ENSG00000138674|O94979-10|SEC31A;nc|ENSG00000138674|O94979-2|SEC31A;nc|ENSG00000138674|O94979-3|SEC31A;nc|ENSG00000138674|O94979-4|SEC31A;nc|ENSG00000138674|O94979-5|SEC31A;nc|ENSG00000138674|O94979-6|SEC31A;nc|ENSG00000138674|O94979-8|SEC31A;nc|ENSG00000138674|O94979-9|SEC31A;SEC31A|p.K616Nfs*18|1|0.26|ENSG00000138674|chr4:82856985-82856985|T/-|frameshift_variant;SEC31A|p.P1058Qfs*62|1|0.4|ENSG00000138674|chr4:82827487-82827487|G/-|frameshift_variant	59.26467630326872	0.23991231615472114	2				NaN	NaN	0	NaN	1614	2500	4110
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4117	15.715	NaN	13519	30	0	2880.6	0.037	+			32826	RCFMCRKK	8	71	564.7840875008691	NaN	0	565.2439575195312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_RC(Carbamidomethyl (C))FMCRKK_	ENSG00000086666|ENST00000261749|ZFAND6;ENSG00000107372|ENST00000376962|ZFAND5;ENST00000557983.1_1_15:80423514-80429967:+|nuORF;nc|ENSG00000086666|Q6FIF0-2|ZFAND6	40.5726180659479	1.7418937515398478	2				NaN	NaN	0	NaN	1615	2500	4110
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4132	15.746	NaN	221070	30	0	146210	0.081	+			6276	AVSQSKELTK	10	60	364.20802593645703	1089.602248409571	3	364.2081604003906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVSQSKELTK_	ENSG00000136603|ENST00000259119|SKIL;ENST00000490894.1_1_3:170102333-170102591:+|nuORF;nc|ENSG00000136603|P12757-3|SKIL;nc|ENSG00000136603|P12757-5|SKIL	39.252832667884924	0.5560298534376815	2				NaN	NaN	0	NaN	1627	2503	4131
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4133	15.748	NaN	118870	30	0	38317	0.084			+	22245	KTALACSGHQV	11	79	557.7878518416583	1113.5611507501164	2	557.7880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTALACSGHQV_	REV__ENST00000523028.5_1_16:21912870-21927266:-|nuORF	41.1089822145965	0.5427687864994973	2				NaN	NaN	0	NaN	1628	2503	4131
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4134	15.749	NaN	47225	30	0	8822.9	0.106			+	30678	QCDFWGLKT	9	74	577.7681383981217	1153.5217238630432	2	577.7670288085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_QC(Carbamidomethyl (C))DFWGLKT_	REV__ENSG00000130227|ENST00000252512|XPO7	71.87747018426188	0.13267044672804276	2				NaN	NaN	0	NaN	1629	2503	4131
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4135	15.751	NaN	18547	30	0	4606	0.106			+	-1	QLAHGTNAPCA	11	68	570.2681698949448	1138.5217868566895	2	570.2684936523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_QLAHGTNAPC(Carbamidomethyl (C))A_	REV__ENST00000585652.5_1_19:2109741-2111012:-|nuORF;REV__ENST00000589223.5_1_19:2102174-2111012:-|nuORF	44.377184641726394	0.49804979881800077	2				NaN	NaN	0	NaN	1630	2503	4131
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4136	15.753	NaN	7149.4	30	0	998.2	0.035	+			44919	TVAGRMVKK	9	66	495.3000056824282	988.5854584316564	2	495.2994689941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TVAGRMVKK_	ENSG00000197321|ENST00000355867|SVIL;nc|ENSG00000197321|O95425-2|SVIL;nc|ENSG00000197321|O95425-3|SVIL;nc|ENSG00000197321|O95425-4|SVIL;SVIL|p.M1863Dfs*18|1|0.28|ENSG00000197321|chr10:29471186-29471187|-/C|frameshift_variant;SVIL|p.M1863Wfs*44|8|0.39|ENSG00000197321|chr10:29471187-29471187|C/-|frameshift_variant;SVIL|p.N2095Kfs*36|1|0.25|ENSG00000197321|chr10:29462394-29462395|-/T|frameshift_variant	66.96192283764107	0.15557981141143568	2				NaN	NaN	0	NaN	1631	2503	4131
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4148	15.78	NaN	307450	30	0	68514	0.141				-1	YLRACQQDRC	10	96	685.3092136899528	1368.6038744467055	2	685.3082275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_YLRAC(Carbamidomethyl (C))QQDRC(Carbamidomethyl (C))_	ENSG00000198788|ENST00000675028|MUC2;nc|ENSG00000198788|Q02817|MUC2	45.97224482568171	0.49411383603842696	2				NaN	NaN	0	NaN	1640	2506	4147
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4149	15.782	NaN	42938	30	0	2955.6	0.106			+	7029	CSKWYTKCNCT	11	91	697.289800491784	1392.565048050368	2	697.288330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_CSKWYTKC(Carbamidomethyl (C))NCT_	REV__ENSG00000102891|ENST00000219162|MT4	53.08895987439943	0.38514566451266113	2				NaN	NaN	0	NaN	1641	2506	4147
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4150	15.784	NaN	24593	30	0	11667	0.106				-1	CYYALCSQDCQ	11	84	734.2715742168976	1466.5285955005952	2	734.2687377929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	3 Carbamidomethyl (C)	_C(Carbamidomethyl (C))YYALC(Carbamidomethyl (C))SQDC(Carbamidomethyl (C))Q_	ENSG00000215182|ENST00000621226|MUC5AC;ENST00000358378.6_11:1212786-1216326:+|nuORF	13.45404412870281	0.8074920481021843	2				NaN	NaN	0	NaN	1642	2506	4147
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4151	15.786	NaN	9924.1	30	0	4106.3	0.106				-1	AVMPPGRSR	9	59	329.5114641415754	NaN	0	329.51141357421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_AVM(Oxidation (M))PPGRSR_	ENSG00000131037|ENST00000201647|EPS8L1;EPS8L1|p.D510Efs*3|1|0.38|ENSG00000131037|chr19:55086071-55086072|AC/-|frameshift_variant;EPS8L1|p.G206Afs*54|1|0.23|ENSG00000131037|chr19:55081330-55081336|GCGGGGC/-|frameshift_variant;nc|ENSG00000131037|Q8TE68-3|EPS8L1	34.172542307311794	0.30503706118289736	2				NaN	NaN	0	NaN	1643	2506	4147
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4152	15.788	NaN	19808	30	0	2055.8	0.106	+			23932	LDPSNSHGEN	10	74	535.2312182027541	1068.4478834723081	2	535.2311401367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LDPSNSHGEN_	UNC80|p.P551L|1|0.45|ENSG00000144406|chr2:209817911-209817911|C/T|missense_variant	72.87924865735499	0.25379688738724415	2				NaN	NaN	0	NaN	1644	2506	4147
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4153	15.79	NaN	10049	30	0	2262.7	0.106				-1	TSLKSIMKK	9	67	526.312782907593	1050.611012881986	2	526.31298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_TSLKSIM(Oxidation (M))KK_	ENSG00000132854|ENST00000371153|KANK4;nc|ENSG00000132854|Q5T7N3-2|KANK4	72.87924865735499	0.12833875048249987	2				NaN	NaN	0	NaN	1645	2506	4147
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4154	15.791	NaN	15221	30	0	1804.8	0.041				-1	YHTWATCCCLT	11	73	708.2789702288873	1414.5433875245744	2	708.2780151367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C)	_YHTWATC(Carbamidomethyl (C))C(Carbamidomethyl (C))CLT_	TRPM1|p.T760Pfs*110|2|0.19|ENSG00000134160|chr15:31038140-31038140|G/-|frameshift_variant	32.81241826257853	0.645615689454792	2				NaN	NaN	0	NaN	1646	2506	4147
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4165	15.818	NaN	23984	30	0	3100.5	0.214	+			13739	GQCGNQIGAK	10	81	516.7482527873683	1031.4819526415365	2	516.7485961914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GQC(Carbamidomethyl (C))GNQIGAK_	CON__ENSEMBL:ENSBTAP00000025008;ENSG00000101162|ENST00000217133|TUBB1;ENSG00000104833|ENST00000264071|TUBB4A;ENSG00000137267|ENST00000333628|TUBB2A;ENSG00000137285|ENST00000259818|TUBB2B;ENSG00000173213|ENST00000308911|TUBB8B;ENSG00000188229|ENST00000340384|TUBB4B;ENSG00000196230|ENST00000327892|TUBB;ENSG00000258947|ENST00000315491|TUBB3;ENSG00000261456|ENST00000568584|TUBB8;ENST00000489942.1_1_6:3155224-3157697:-|nuORF;ENST00000554116.5_1_16:89989809-89998148:+|nuORF;ENST00000554927.1_1_16:89989809-89999206:+|nuORF;ENST00000604929.1_1_9:140135770-140136775:+|nuORF;TUBB|p.G142Afs*23|1|0.35|ENSG00000196230|chr6:30723483-30723483|G/-|frameshift_variant;TUBB2B|p.D177Hfs*21|1|0.32|ENSG00000137285|chr6:3225559-3225560|TC/-|frameshift_variant;TUBB4A|p.G141Vfs*24|2|0.35|ENSG00000104833|chr19:6496077-6496077|C/-|frameshift_variant	166.67852932204877	0.004741521871917433	2				NaN	NaN	0	NaN	1654	2509	4164
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4166	15.822	NaN	28148	30	0	4176.2	0.106	+			39234	STAKHVFEK	9	102	349.5256716413472	1045.5551855242416	3	349.5258483886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STAKHVFEK_	ENSG00000184445|ENST00000333479|KNTC1;ENST00000436959.7_1_12:123087118-123101977:+|nuORF;KNTC1|p.K1646Nfs*2|2|0.35|ENSG00000184445|chr12:122603073-122603073|A/-|frameshift_variant;KNTC1|p.K1646Tfs*12|1|0.13|ENSG00000184445|chr12:122603073-122603074|AA/-|frameshift_variant;KNTC1|p.L1647Tfs*12|1|0.3|ENSG00000184445|chr12:122603072-122603073|-/A|frameshift_variant;nc|ENSG00000184445|P50748-2|KNTC1	63.53385203322761	0.18415635464017938	2				NaN	NaN	0	NaN	1655	2509	4164
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4167	15.824	NaN	13940	30	0	3367.8	0.106	+			14511	GTDEHVVCK	9	77	522.7427444642498	1043.4709359952994	2	522.742919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_GTDEHVVC(Carbamidomethyl (C))K_	nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM	110.11987700582712	0.028875675806141952	2				NaN	NaN	0	NaN	1656	2509	4164
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4168	15.826	NaN	20295	30	0	6829.5	0.106			+	17166	HTLHDFHRR	9	82	609.8155660388733	1217.6165791445464	2	609.8153076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HTLHDFHRR_	REV__ENST00000431285.5_1_3:9471730-9475177:+|nuORF	63.53385203322761	0.18415635464017938	2				NaN	NaN	0	NaN	1657	2509	4164
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4169	15.827	NaN	6594.2	30	0	1348.9	0.106	+			22011	KSGEFGVR	8	57	440.23788350473944	878.4612140762789	2	440.2377014160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KSGEFGVR_	nc|ENSG00000205060|Q969S0-2|SLC35B4	58.78195531508484	0.5138399468736706	2				NaN	NaN	0	NaN	1658	2509	4164
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4170	15.829	NaN	22021	30	0	4065	0.106			+	22079	KSLKMKRKA	9	80	553.3461490835915	1104.677745233983	2	553.3466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_KSLKM(Oxidation (M))KRKA_	REV__ENST00000435945.1_1_Y:28761086-28769767:-|nuORF;REV__ENST00000446672.2_1_13:19955792-19968894:+|nuORF	76.7741389293348	0.11149722112137898	2				NaN	NaN	0	NaN	1659	2509	4164
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4171	15.831	NaN	29648	30	0	2792.6	0.036	+			40790	SVDQAGKYSK	10	90	541.7777328158106	1081.5409126984212	2	541.7781982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVDQAGKYSK_	ENSG00000124383|ENST00000244230|MPHOSPH10	158.47086538638308	0.006991472700766511	2				NaN	NaN	0	NaN	1660	2509	4164
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4186	15.863	NaN	25393	30	0	18038	0.214				-1	 	0	42	413.22709456116115	824.4396361891223	2	413.22674560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1672	2512	4185
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4187	15.867	NaN	18841	30	0	9861.4	0.106	+			6466	AVYKTHVEK	9	55	358.8693792574948	1073.5863083726845	3	358.8695373535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVYKTHVEK_	ENSG00000196954|ENST00000444739|CASP4;ENST00000529565.1_1_11:104819221-104819389:-|nuORF;ENST00000534356.1_1_11:104817674-104819389:-|nuORF;nc|ENSG00000196954|P49662-2|CASP4	49.44154591367651	0.3095138337212152	2				NaN	NaN	0	NaN	1673	2512	4185
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4188	15.869	NaN	10626	30	0	1063.7	0.106	+			14040	GSGSVSIRK	9	69	445.75631251976836	889.4980721063367	2	445.756103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GSGSVSIRK_	ENSG00000167202|ENST00000300584|TBC1D2B;nc|ENSG00000167202|Q9UPU7-2|TBC1D2B;TBC1D2B|p.A337T|1|0.15|ENSG00000167202|chr15:78025336-78025336|C/T|missense_variant;TBC1D2B|p.L914Yfs*19|1|0.31|ENSG00000167202|chr15:77998312-77998312|G/-|frameshift_variant	75.04331003522576	0.118981335847003	2				NaN	NaN	0	NaN	1674	2512	4185
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4189	15.871	NaN	12739	30	0	2779.5	0.106			+	32027	QRNESEESK	9	69	553.7564698182814	1105.4983867033627	2	553.7569580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QRNESEESK_	REV__ENSG00000135951|ENST00000393483|TSGA10;REV__ENST00000489546.5_1_2:99635091-99688291:-|nuORF;REV__TSGA10|p.M413L|1|0.02|ENSG00000135951|chr2:99065106-99065106|T/G|missense_variant	47.657333605630114	0.33044192980041115	2				NaN	NaN	0	NaN	1675	2512	4185
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4190	15.872	NaN	6391.1	30	0	2030.5	0.106	+			50943	YHPRKSTAATS	11	68	406.87930802142694	1217.616094664481	3	406.87896728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YHPRKSTAATS_	KANK1|p.L125Sfs*27|1|0.42|ENSG00000107104|chr9:711132-711133|-/C|frameshift_variant	28.5767321226876	0.690044582712672	2				NaN	NaN	0	NaN	1676	2512	4185
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4191	15.874	NaN	33430	30	0	6915.2	0.034	+			44223	TRPRCPVQ	8	62	478.7590503701493	955.5035478070986	2	478.758544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TRPRCPVQ_	ENSG00000185046|ENST00000683438|ANKS1B;nc|ENSG00000185046|Q7Z6G8|ANKS1B	71.29570347882199	0.39610197767395533	2				NaN	NaN	0	NaN	1677	2512	4185
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4192	15.875	NaN	11975	30	0	2029.8	0.14			+	31599	QLTTKSSVH	9	70	500.7751545120487	999.5357560908974	2	500.774658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QLTTKSSVH_	REV__ENSG00000067798|ENST00000397909|NAV3;REV__NAV3|p.K1745Sfs*14|1|0.13|ENSG00000067798|chr12:78177244-78177244|C/-|frameshift_variant;REV__NAV3|p.L1995Sfs*5|1|0.05|ENSG00000067798|chr12:78188704-78188705|-/T|frameshift_variant;REV__NAV3|p.T2082Qfs*22|1|0.13|ENSG00000067798|chr12:78190166-78190166|A/-|frameshift_variant;REV__nc|ENSG00000067798|Q8IVL0-2|NAV3;REV__nc|ENSG00000067798|Q8IVL0-3|NAV3	49.44154591367651	0.3095138337212152	2				NaN	NaN	0	NaN	1678	2512	4185
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4204	15.902	NaN	11016	30	0	1594.6	0.214	+			399	AASSEHFEK	9	70	503.2353504022792	1004.4561478713584	2	503.23541259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AASSEHFEK_	ENSG00000100568|ENST00000554659|VTI1B	96.0336014099291	0.047854655524928534	2				NaN	NaN	0	NaN	1687	2515	4203
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4205	15.906	NaN	8356.8	30	0	4253.6	0.106			+	23955	LDSKEVRK	8	53	325.5256211440777	973.5550340324332	3	325.52581787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LDSKEVRK_	REV__ENSG00000164088|ENST00000323588|PPM1M;REV__ENST00000482724.1_1_3:52282581-52283827:+|nuORF;REV__ENST00000489606.5_1_3:52282326-52283827:+|nuORF;REV__nc|ENSG00000164088|Q96MI6-1|PPM1M;REV__nc|ENSG00000164088|Q96MI6-3|PPM1M;REV__nc|ENSG00000164088|Q96MI6-4|PPM1M	24.20275056022122	0.7724576178584145	2				NaN	NaN	0	NaN	1688	2515	4203
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4206	15.908	NaN	10285	30	0	2317.6	0.106				-1	GTCQDCKVQ	9	63	519.721969646635	1037.4293863600699	2	519.72216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_GTC(Carbamidomethyl (C))QDCKVQ_	ENSG00000077254|ENST00000370794|USP33;ENST00000528150.1_1_1:78206598-78225465:-|nuORF;nc|ENSG00000077254|Q8TEY7-3|USP33;nc|ENSG00000077254|Q8TEY7|USP33;USP33|p.I935Lfs*3|1|0.1|ENSG00000077254|chr1:77697343-77697343|T/-|frameshift_variant	35.15202426646627	0.4747332964206883	2				NaN	NaN	0	NaN	1689	2515	4203
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4207	15.91	NaN	18576	30	0	3386.4	0.106	+			39818	STLGSQGQTGK	11	69	532.2728427287306	1062.531132524261	2	532.2731323242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STLGSQGQTGK_	ENSG00000124641|ENST00000265350|MED20;nc|ENSG00000288721|Q9H944-2|MED20	118.23318122614258	0.023577246283422584	2				NaN	NaN	0	NaN	1690	2515	4203
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4208	15.911	NaN	5392.7	30	0	1027.4	0.106			+	2235	ALSPLYCQS	9	55	491.2383823670582	980.4622118009164	2	491.2381591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ALSPLYCQS_	REV__ENST00000436874.5_1_12:95656811-95660218:+|nuORF;REV__ENST00000547611.5_1_12:95645768-95660218:+|nuORF	21.9598887501803	0.5980208138527809	2				NaN	NaN	0	NaN	1691	2515	4203
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4209	15.913	NaN	2556.7	30	0	337.78	0.106	+			22250	KTALSLGR	8	55	423.2638420096708	NaN	0	423.2637634277344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KTALSLGR_	nc|ENSG00000249139|O95925-2|EPPIN	62.107414245175825	1.7418937515398478	2				NaN	NaN	0	NaN	1692	2515	4203
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4210	15.915	NaN	7473.5	30	0	1705.8	0.035			+	11766	FSKKHWGP	8	60	493.7634713485053	985.5123897638106	2	493.7633361816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FSKKHWGP_	REV__nc|ENSG00000132849|Q8NI35-5|PATJ	25.450171626174864	0.7628259754767981	2				NaN	NaN	0	NaN	1693	2515	4203
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4222	15.942	NaN	15003	30	0	1955.5	0.214			+	20323	KEQLTRYNS	9	73	569.7965747569448	1137.5785965806895	2	569.7964477539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEQLTRYNS_	REV__SLITRK3|p.L812Q|1|0.27|ENSG00000121871|chr3:165188396-165188396|A/T|missense_variant	71.87747018426188	0.13267044672804276	2				NaN	NaN	0	NaN	1702	2518	4221
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4223	15.946	NaN	20004	30	0	3385.9	0.106	+			40088	STNSHPILRK	10	82	576.8281829716254	1151.6418130100508	2	576.8277587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STNSHPILRK_	ENSG00000138081|ENST00000403359|FBXO11;nc|ENSG00000138081|Q86XK2-5|FBXO11;nc|ENSG00000138081|Q86XK2-6|FBXO11	85.92353377893507	0.15441247375292388	2				NaN	NaN	0	NaN	1703	2518	4221
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4224	15.948	NaN	7634.1	30	0	1181.4	0.106	+			4008	ATCGMGMKK	9	64	492.22714256667064	982.4397322001413	2	492.2269287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_ATC(Carbamidomethyl (C))GMGMKK_	ENSG00000262655|ENST00000576479|SPON1	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	1704	2518	4221
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4225	15.95	NaN	6859.7	30	0	830.82	0.106				-1	REYEERINSMT	11	76	722.3290758589667	1442.6435987847333	2	722.326416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_REYEERINSM(Oxidation (M))T_	nc|ENSG00000284862|Q9UFE4-2|CCDC39;nc|ENSG00000284862|Q9UFE4|CCDC39	30.568863376406313	0.6691487505135859	2				NaN	NaN	0	NaN	1705	2518	4221
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4226	15.951	NaN	5173.4	30	0	1173.2	0.106	+			22550	KTRVEKIE	8	61	501.8008014201066	1001.5870499070132	2	501.80035400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KTRVEKIE_	ENSG00000171681|ENST00000261168|ATF7IP;ENST00000537653.5_1_12:14576849-14628955:+|nuORF;ENST00000539659.5_1_12:14576849-14613468:+|nuORF;ENST00000541654.1_1_12:14538317-14613468:+|nuORF;nc|ENSG00000171681|Q6VMQ6-2|ATF7IP;nc|ENSG00000171681|Q6VMQ6-4|ATF7IP;nc|ENSG00000171681|Q6VMQ6-5|ATF7IP	31.529811441608018	0.715883593221515	2				NaN	NaN	0	NaN	1706	2518	4221
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4227	15.953	NaN	7246.8	30	0	950.48	0.106	+			39052	SSSPVNVKK	9	68	473.27174057557863	944.5289282179573	2	473.2715759277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSSPVNVKK_	ENSG00000153187|ENST00000640218|HNRNPU;ENST00000476241.2_2_1:245025757-245027609:-|nuORF;nc|ENSG00000153187|Q00839-2|HNRNPU	49.44154591367651	0.3095138337212152	2				NaN	NaN	0	NaN	1707	2518	4221
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4228	15.955	NaN	7007.2	30	0	1994.7	0.035			+	12261	GAVEVKVGSR	10	61	334.52925047256775	1000.5659220179033	3	334.5293273925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GAVEVKVGSR_	REV__ENST00000486335.1_1_2:74702161-74702799:-|nuORF	35.15202426646627	0.5927656479315102	2				NaN	NaN	0	NaN	1708	2518	4221
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4242	15.986	NaN	217460	30	0	122280	0.212	+			6331	AVTKYTSAK	9	113	323.5184454518693	967.533506955808	3	323.5186462402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVTKYTSAK_	ENSG00000124635|ENST00000339812|H2BC11;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000234289|ENST00000599962|H2BC12L	83.6470233535746	0.08277643980271215	2				NaN	NaN	0	NaN	1719	2521	4241
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4243	15.989	NaN	50218	30	0	6939.7	0.106	+			40705	SVCEGKGLHR	10	97	571.7909603213152	1141.5673677094303	2	571.791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SVC(Carbamidomethyl (C))EGKGLHR_	ENSG00000161011|ENST00000389805|SQSTM1;ENST00000466342.1_1_5:179250916-179260288:+|nuORF;nc|ENSG00000161011|Q13501-2|SQSTM1	96.66504779109242	0.09291513985748291	2				NaN	NaN	0	NaN	1720	2521	4241
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4244	15.991	NaN	52814	30	0	18102	0.106			+	13653	GMVRTFQGP	9	56	496.7534214936579	991.4922900541159	2	496.7534484863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GMVRTFQGP_	REV__ENSG00000020577|ENST00000554335|SAMD4A;REV__nc|ENSG00000020577|Q9UPU9-2|SAMD4A;REV__nc|ENSG00000020577|Q9UPU9-3|SAMD4A	40.77816245573522	0.41113185337114944	2				NaN	NaN	0	NaN	1721	2521	4241
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4245	15.993	NaN	35988	30	0	7626	0.106	+			20270	KENKIAKKK	9	87	543.8534594065568	1085.6923658799135	2	543.8538818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KENKIAKKK_	tr|U7T6N0|U7T6N0_FUSNUHTHcro/C1-typedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00304PE=4SV=1	132.757866228626	0.013877640931359021	2				NaN	NaN	0	NaN	1722	2521	4241
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4246	15.995	NaN	17229	30	0	3914.3	0.106	+			16294	HEHGQLHSM	9	77	359.16258248115196	1074.4659180436558	3	359.1628723144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HEHGQLHSM_	ENSG00000196504|ENST00000545856|PRPF40A;nc|ENSG00000196504|O75400-2|PRPF40A;nc|ENSG00000196504|O75400-3|PRPF40A;nc|ENSG00000196504|O75400|PRPF40A	66.42927471994793	0.16001998865088202	2				NaN	NaN	0	NaN	1723	2521	4241
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4247	15.997	NaN	12736	30	0	3689.3	0.032	+			12257	GATVPPKE	8	65	399.72169729933626	797.4288416654725	2	399.7215576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GATVPPKE_	ENSG00000120549|ENST00000376454|KIAA1217;KIAA1217|p.N1661Tfs*23|1|0.07|ENSG00000120549|chr10:24544247-24544247|A/-|frameshift_variant;KIAA1217|p.Q1199Kfs*12|1|0.25|ENSG00000120549|chr10:24542749-24542749|C/-|frameshift_variant;nc|ENSG00000120549|Q5T5P2-10|KIAA1217;nc|ENSG00000120549|Q5T5P2-3|KIAA1217;nc|ENSG00000120549|Q5T5P2-6|KIAA1217;nc|ENSG00000120549|Q5T5P2-7|KIAA1217;nc|ENSG00000120549|Q5T5P2-8|KIAA1217	65.80317337860623	0.44433089765398776	2				NaN	NaN	0	NaN	1724	2521	4241
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4261	16.027	NaN	114660	30	0	39706	0.18			+	48172	VTAAVERVK	9	77	324.8659142337698	971.5759133015094	3	324.86602783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTAAVERVK_	REV__ENSG00000146918|ENST00000356309|NCAPG2;REV__ENST00000432615.5_1_7:158424360-158447416:-|nuORF;REV__ENST00000467785.5_1_7:158424360-158447992:-|nuORF;REV__nc|ENSG00000146918|Q86XI2-2|NCAPG2	56.72105179125745	0.24094814563026265	2				NaN	NaN	0	NaN	1735	2524	4260
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4262	16.03	NaN	17363	30	0	9120.7	0.106			+	10915	FDIIYVLN	8	62	498.7748390551309	NaN	0	498.7745361328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FDIIYVLN_	REV__CSNK1D|p.R358Gfs*12|1|0.25|ENSG00000141551|chr17:82249000-82249000|G/-|frameshift_variant;REV__CSNK1D|p.T344Hfs*26|1|0.26|ENSG00000141551|chr17:82249459-82249459|G/-|frameshift_variant;REV__ENSG00000141551|ENST00000314028|CSNK1D;REV__ENSG00000213923|ENST00000396832|CSNK1E;REV__ENST00000578904.1_1_17:80208040-80213403:-|nuORF;REV__ENST00000581241.5_1_17:80206597-80211051:-|nuORF;REV__ENST00000584377.5_1_17:80203885-80211156:-|nuORF;REV__nc|ENSG00000141551|P48730-2|CSNK1D	47.657333605630114	1.7418937515398478	2				NaN	NaN	0	NaN	1736	2524	4260
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4263	16.032	NaN	4590	30	0	899.19	0.106			+	12266	GAVNSVKK	8	51	401.74283622984274	801.4711195264855	2	401.74267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GAVNSVKK_	REV__BICD2|p.D511N|1|0.21|ENSG00000185963|chr9:92719114-92719114|C/T|missense_variant	53.351449002276354	0.5676011784961348	2				NaN	NaN	0	NaN	1737	2524	4260
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4264	16.034	NaN	6758.3	30	0	1130.2	0.106	+			8416	EAQLDREGD	9	67	516.7331687610753	1031.4517845889504	2	516.7319946289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EAQLDREGD_	ENSG00000132406|ENST00000382753|TMEM128;ENST00000254742.6_1_4:4249740-4249929:-|nuORF;TMEM128|p.E42Gfs*8|1|0.26|ENSG00000132406|chr4:4246318-4246319|-/T|frameshift_variant	52.936696900407355	0.27249468807391813	2				NaN	NaN	0	NaN	1738	2524	4260
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4265	16.036	NaN	13311	30	0	2489.3	0.106			+	30649	QATPETRHM	9	68	535.7566336227936	1069.4987143123872	2	535.7565307617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QATPETRHM_	REV__ENSG00000184110|ENST00000331666|EIF3C;REV__ENSG00000205609|ENST00000380876|EIF3CL;REV__ENST00000565932.5_1_16:28734455-28746831:+|nuORF;REV__nc|ENSG00000184110|Q99613-2|EIF3C	42.396135135203025	0.392153681582562	2				NaN	NaN	0	NaN	1739	2524	4260
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4266	16.038	NaN	14484	30	0	2424.4	0.106	+			1054	AEKREHEKEVL	11	80	684.3685787782189	1366.7226046232377	2	684.3678588867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEKREHEKEVL_	ENSG00000117632|ENST00000455785|STMN1;ENST00000465604.1_1_1:26227509-26228203:-|nuORF;ENST00000485226.1_1_1:26227942-26230296:-|nuORF;nc|ENSG00000117632|P16949-2|STMN1	82.5048064154565	0.13149110632092975	2				NaN	NaN	0	NaN	1740	2524	4260
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4267	16.04	NaN	11871	30	0	1439.4	0.036	+			19530	KAVTYLRQK	9	73	553.8379628079314	1105.6613726826627	2	553.838134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KAVTYLRQK_	ENSG00000032742|ENST00000351808|IFT88;ENST00000461115.5_1_13:21189938-21205265:+|nuORF;ENST00000482172.5_1_13:21189938-21228047:+|nuORF;IFT88|p.K453Rfs*5|3|0.37|ENSG00000032742|chr13:20631041-20631041|A/-|frameshift_variant;IFT88|p.M728*|1|0.4|ENSG00000032742|chr13:20663579-20663579|A/-|frameshift_variant;IFT88|p.S746Lfs*10|1|0.3|ENSG00000032742|chr13:20670999-20671000|-/G|frameshift_variant;nc|ENSG00000032742|Q13099-1|IFT88;nc|ENSG00000032742|Q13099-3|IFT88	61.691277971877994	0.19951612995419254	2				NaN	NaN	0	NaN	1741	2524	4260
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4283	16.072	NaN	50423	30	0	7063.3	0.214	+			41809	SVSSDRIQK	9	85	510.27799958140696	1018.5414462296139	2	510.27740478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSSDRIQK_	ENSG00000146278|ENST00000336032|PNRC1;nc|ENSG00000146278|Q12796-2|PNRC1;PNRC1|p.K251Sfs*14|2|0.25|ENSG00000146278|chr6:89083958-89083958|A/-|frameshift_variant	134.7655990226056	0.012935733000282069	2				NaN	NaN	0	NaN	1754	2527	4282
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4284	16.076	NaN	10777	30	0	1320.2	0.106	+			46306	VEKETQEKM	9	73	561.2788435789407	1120.5431342246814	2	561.2794189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VEKETQEKM_	ENSG00000136888|ENST00000374050|ATP6V1G1	93.5975768576971	0.05472259948179787	2				NaN	NaN	0	NaN	1755	2527	4282
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4285	16.078	NaN	21106	30	0	8426.8	0.106			+	34448	RTVTRKIEG	9	74	530.3176896257783	NaN	0	530.3173217773438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RTVTRKIEG_	REV__ENSG00000074657|ENST00000591808|ZNF532;REV__ENSG00000166716|ENST00000560079|ZNF592;REV__ZNF532|p.T1272Lfs*8|1|0.46|ENSG00000074657|chr18:58984370-58984370|A/-|frameshift_variant;REV__ZNF532|p.Y656Lfs*14|1|0.07|ENSG00000074657|chr18:58920247-58920248|-/T|frameshift_variant	44.377184641726394	0.24544280798894275	2				NaN	NaN	0	NaN	1756	2527	4282
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4286	16.08	NaN	5643.6	30	0	1217.2	0.106	+			150	AAIDKMTKK	9	67	503.2915435271458	1004.5685341210916	2	503.2914123535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AAIDKMTKK_	ENSG00000132394|ENST00000254730|EEFSEC;ENST00000484438.1_1_3:127872521-128060079:+|nuORF;nc|ENSG00000132394|P57772-2|EEFSEC	42.86426827375447	0.38666266728046506	2				NaN	NaN	0	NaN	1757	2527	4282
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4287	16.081	NaN	4406.1	30	0	792.28	0.106	+			3139	ASHTGSSL	8	51	380.1851260491156	758.3556991650312	2	380.1850891113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASHTGSSL_	ENSG00000168062|ENST00000301887|BATF2;nc|ENSG00000168062|Q8N1L9-2|BATF2	90.77665401227738	0.27511901818546464	2				NaN	NaN	0	NaN	1758	2527	4282
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4288	16.083	NaN	6048.9	30	0	850.71	0.035	+			45120	TVKDFSHAK	9	67	516.7773161974467	1031.5400794616933	2	516.77734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TVKDFSHAK_	ENSG00000164941|ENST00000523731|INTS8;ENST00000523206.5_1_8:95850795-95884149:+|nuORF;ENST00000523321.5_1_8:95835614-95871872:+|nuORF;nc|ENSG00000164941|Q75QN2-2|INTS8	101.45984612302182	0.0377122763612125	2				NaN	NaN	0	NaN	1759	2527	4282
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4289	16.084	NaN	6677	30	0	759.39	0.141			+	31364	QKDAAKENIL	10	71	565.3148635515282	1128.6151741698563	2	565.3145141601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QKDAAKENIL_	REV__BPIFB1|p.L332Q|1|0.43|ENSG00000125999|chr20:33302929-33302929|T/A|missense_variant	85.16082228582465	0.15877915086237185	2				NaN	NaN	0	NaN	1760	2527	4282
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4301	16.112	NaN	13772	30	0	3938.7	0.214	+			41735	SVSHCRNLQ	9	66	522.2573848063658	1042.5002166795316	2	522.2573852539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSHCRNLQ_	ENSG00000161040|ENST00000440067|FBXL13;nc|ENSG00000161040|Q8NEE6-2|FBXL13;nc|ENSG00000161040|Q8NEE6-3|FBXL13;nc|ENSG00000161040|Q8NEE6-4|FBXL13;nc|ENSG00000161040|Q8NEE6|FBXL13	62.107414245175825	0.1960472003779324	2				NaN	NaN	0	NaN	1769	2530	4300
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4302	16.115	NaN	8935	30	0	2427.8	0.106	+			41920	SVVKITSKK	9	62	495.32164744229283	988.6287419513857	2	495.3216247558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVVKITSKK_	ENSG00000036054|ENST00000394144|TBC1D23;ENST00000471273.1_1_3:100034907-100042509:+|nuORF;ENST00000486274.5_1_3:99980342-100042509:+|nuORF;nc|ENSG00000036054|Q9NUY8-2|TBC1D23	115.23196543181992	0.024086211614104236	2				NaN	NaN	0	NaN	1770	2530	4300
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4303	16.117	NaN	9422.2	30	0	1382.6	0.106	+			42017	SVYSPVKKK	9	69	518.3139696560796	1034.6133863789591	2	518.31396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVYSPVKKK_	ENSG00000136243|ENST00000258742|NUP42;ENST00000487595.1_7:23221671-23236000:+|nuORF;ENST00000497500.1_7:23221671-23226770:+|nuORF;nc|ENSG00000136243|O15504-2|NUP42	90.36981228632155	0.0638227155548745	2				NaN	NaN	0	NaN	1771	2530	4300
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4304	16.119	NaN	20719	30	0	3406.9	0.106	+			6556	AYKKTHETL	9	88	545.798911964962	1089.583270996724	2	545.7994995117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AYKKTHETL_	ENSG00000111907|ENST00000534000|TPD52L1;ENST00000392483.6_1_6:125475019-125569560:+|nuORF;ENST00000532978.5_1_6:125475518-125573183:+|nuORF;nc|ENSG00000111907|Q16890-2|TPD52L1;nc|ENSG00000111907|Q16890-3|TPD52L1;nc|ENSG00000111907|Q16890-4|TPD52L1;nc|ENSG00000111907|Q16890-5|TPD52L1	115.49404669440601	0.023927554121326553	2				NaN	NaN	0	NaN	1772	2530	4300
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4305	16.121	NaN	6915.4	30	0	3050	0.106	+			47777	VSHLIEKLP	9	57	345.87795556477533	1034.612037294526	3	345.87811279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSHLIEKLP_	ENSG00000184363|ENST00000331563|PKP3;nc|ENSG00000184363|Q9Y446-2|PKP3	29.14955571784316	0.5308295550522326	2				NaN	NaN	0	NaN	1773	2530	4300
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4306	16.123	NaN	10388	30	0	1004.2	0.106	+			20314	KEQEQAQKL	9	75	551.2993938735226	1100.5842348138451	2	551.2994995117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KEQEQAQKL_	ENSG00000136021|ENST00000360820|SCYL2	195.04605151776784	5.427472092243166E-05	2				NaN	NaN	0	NaN	1774	2530	4300
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4307	16.125	NaN	11448	30	0	1789.4	0.037	+			31030	QETVEKFRQ	9	65	582.8045623239415	NaN	0	582.8047485351562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QETVEKFRQ_	ENSG00000145781|ENST00000274458|COMMD10	74.1650062923329	0.09137789763820878	2				NaN	NaN	0	NaN	1775	2530	4300
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4322	16.156	NaN	19039	30	0	2149	0.214	+			4979	ATQVVVEKK	9	83	501.3029352549592	1000.5913175767184	2	501.3028564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATQVVVEKK_	ENSG00000204394|ENST00000375663|VARS1;nc|ENSG00000204394|P26640-2|VARS1;VARS|p.A620Pfs*25|1|0.23|ENSG00000204394|chr6:31782750-31782750|C/-|frameshift_variant;VARS|p.L801Wfs*10|1|0.3|ENSG00000204394|chr6:31781707-31781707|A/-|frameshift_variant	177.3047273071476	0.0015666121956477066	2				NaN	NaN	0	NaN	1787	2533	4321
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4323	16.16	NaN	15302	30	0	3609.1	0.106	+			16699	HKQKHKKQ	8	81	531.3217934027732	1060.6290338723463	2	531.8248291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HKQKHKKQ_	ENSG00000078403|ENST00000307729|MLLT10;MLLT10|p.L1011Cfs*11|1|0.05|ENSG00000078403|chr10:21740105-21740105|C/-|frameshift_variant;MLLT10|p.L731Ffs*8|1|0.25|ENSG00000078403|chr10:21731023-21731024|-/T|frameshift_variant;MLLT10|p.Q1012Rfs*10|1|0.05|ENSG00000078403|chr10:21740107-21740107|G/-|frameshift_variant;nc|ENSG00000078403|P55197-1|MLLT10	42.47446043378293	0.6409579893742323	2				NaN	NaN	0	NaN	1788	2533	4321
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4324	16.162	NaN	22094	30	0	7742.1	0.106	+			14471	GTCGKAFSR	9	86	492.2398103155016	982.4650676978032	2	492.2395935058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_GTC(Carbamidomethyl (C))GKAFSR_	ENSG00000124216|ENST00000244050|SNAI1	134.7655990226056	0.012935733000282069	2				NaN	NaN	0	NaN	1789	2533	4321
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4325	16.164	NaN	9539.2	30	0	1410.5	0.106	+			40127	STQAEGTRTLK	11	72	596.3200838218447	1190.6256147104893	2	596.320068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STQAEGTRTLK_	ENSG00000095319|ENST00000372577|NUP188;nc|ENSG00000095319|Q5SRE5-2|NUP188	70.41160668669231	0.23230827815249774	2				NaN	NaN	0	NaN	1790	2533	4321
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4326	16.165	NaN	5410	30	0	1250.9	0.106	+			14884	GTLQSQEAK	9	62	481.25092784681544	NaN	0	481.2508239746094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTLQSQEAK_	ENSG00000099290|ENST00000282633|WASHC2A;ENSG00000172661|ENST00000623400|WASHC2C;nc|ENSG00000099290|Q641Q2-2|WASHC2A;nc|ENSG00000172661|Q9Y4E1-1|WASHC2C;nc|ENSG00000172661|Q9Y4E1-2|WASHC2C;nc|ENSG00000172661|Q9Y4E1-3|WASHC2C;nc|ENSG00000172661|Q9Y4E1-4|WASHC2C;nc|ENSG00000172661|Q9Y4E1-5|WASHC2C;nc|ENSG00000172661|Q9Y4E1-6|WASHC2C	83.6470233535746	0.058886874190800687	2				NaN	NaN	0	NaN	1791	2533	4321
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4327	16.167	NaN	6881	30	0	1252.2	0.037	+			48544	VTNVVPLRSLS	11	74	592.8534334934398	1183.6923140536794	2	593.2381591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTNVVPLRSLS_	CDH1|p.F462Lfs*19|1|0.16|ENSG00000039068|chr16:68815577-68815577|T/-|frameshift_variant	41.1089822145965	0.5427687864994973	2				NaN	NaN	0	NaN	1792	2533	4321
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4328	16.168	NaN	4639.5	30	0	941.05	0.144				-1	CGLRPAPCTWD	11	27	638.2861238708957	1274.5576948085914	2	638.2869873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_C(Carbamidomethyl (C))GLRPAPCTWD_	ENST00000330175.8_2_17:48188692-48189373:-|nuORF	8.693696342081763	0.8297815791940972	2				NaN	NaN	0	NaN	1793	2533	4321
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4343	16.201	NaN	23648	30	0	2437.5	0.212	+			22929	KVQDVKKTIQK	11	92	657.9091662745565	1313.8037796159128	2	657.9089965820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVQDVKKTIQK_	ENSG00000133706|ENST00000394434|LARS1;ENST00000508667.5_1_5:145522961-145531505:-|nuORF;nc|ENSG00000133706|Q9P2J5-2|LARS1	229.81649104096465	5.5454162218069994E-18	2				NaN	NaN	0	NaN	1805	2536	4342
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4344	16.205	NaN	11014	30	0	6897.3	0.106				-1	 	0	46	413.22709456116115	824.4396361891223	2	413.226806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1806	2536	4342
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4345	16.207	NaN	12809	30	0	2254.4	0.106	+			34184	RTCWETTKK	9	79	605.3061547340305	1208.597756534861	2	605.3060913085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_RTC(Carbamidomethyl (C))WETTKK_	ENST00000504956.5_1_4:87869676-87967907:+|nuORF;ENST00000511442.1_2_4:87869713-87967910:+|nuORF	98.58198989935565	0.04066992115528678	2				NaN	NaN	0	NaN	1807	2536	4342
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4346	16.209	NaN	8562	30	0	720.26	0.106	+			20152	KEKQAAAEK	9	68	501.78246182403916	1001.5503707148783	2	501.7823791503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEKQAAAEK_	ENST00000416785.1_1_6:28699967-28700618:+|nuORF	75.04331003522576	0.118981335847003	2				NaN	NaN	0	NaN	1808	2536	4342
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4347	16.211	NaN	15153	30	0	5443.3	0.106	+			13369	GLANLNPVTW	10	61	362.19750055939335	1083.57067227838	3	362.1977233886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GLANLNPVTW_	nc|ENSG811|Q9UKH3|ERVK-9_env;nc|ENSG815|Q902F8|ERVK-8_env;nc|ENSG819|P61567|ERVK-7_env;nc|ENSG821|P63135|ERVK-7_pol;nc|ENSG825|Q69384|ERVK-6_env;nc|ENSG833|P61570|ERVK-25_env;nc|ENSG836|P61566|ERVK-24_env;nc|ENSG840|P61565|ERVK-21_env;nc|ENSG845|O71037|ERVK-19_env;nc|ENSG849|O42043|ERVK-18_env	26.69291269510374	0.6618461711292317	2				NaN	NaN	0	NaN	1809	2536	4342
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4348	16.212	NaN	7385.6	30	0	1618	0.036	+			45057	TVHARTLTTL	10	68	556.8251753323043	1111.6357977314085	2	556.8256225585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TVHARTLTTL_	CCDC88C|p.K1383Sfs*29|1|0.08|ENSG00000015133|chr14:91291049-91291049|T/-|frameshift_variant;ENSG00000015133|ENST00000389857|CCDC88C	35.15202426646627	0.5927656479315102	2				NaN	NaN	0	NaN	1810	2536	4342
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4349	16.213	NaN	10845	30	0	1178	0.141			+	24598	LGQKPWLDQ	9	75	542.7936423536473	1083.5727317740946	2	542.7933349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LGQKPWLDQ_	REV__ENSG00000198039|ENST00000476120|ZNF273;REV__nc|ENSG00000198039|Q14593-2|ZNF273	54.776311868738084	0.25715957988447635	2				NaN	NaN	0	NaN	1811	2536	4342
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4360	16.241	NaN	14124	30	0	1283.8	0.214	+			39320	STAVATDVKK	10	80	510.2902613197813	1018.5659697063626	2	510.2902526855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STAVATDVKK_	ENSG00000128298|ENST00000381669|BAIAP2L2;nc|ENSG00000128298|Q6UXY1-2|BAIAP2L2	133.9934435666947	0.012355562819581703	2				NaN	NaN	0	NaN	1819	2539	4359
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4361	16.244	NaN	12155	30	0	3353.4	0.106			+	28741	NNTTSFSNQG	10	69	535.2312632816321	1068.447973630064	2	535.2313842773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NNTTSFSNQG_	REV__ENSG00000143797|ENST00000305997|MBOAT2	42.86426827375447	0.522752283233888	2				NaN	NaN	0	NaN	1820	2539	4359
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4362	16.246	NaN	7966.7	30	0	537.05	0.106	+			12802	GEMDVWYNVEK	11	74	685.3092136899528	1368.6038744467055	2	685.800537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEMDVWYNVEK_	UNC13C|p.L1329V|1|0.98|ENSG00000137766|chr15:54294061-54294061|T/G|missense_variant	42.86426827375447	0.5187511139693657	2				NaN	NaN	0	NaN	1821	2539	4359
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4363	16.248	NaN	4047.5	30	0	778.14	0.106			+	44184	TQVALQTQ	8	45	444.7428567313575	887.471160529515	2	444.7427062988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TQVALQTQ_	REV__AP2A1|p.Q851Rfs*5|1|0.43|ENSG00000196961|chr19:49805672-49805672|C/-|frameshift_variant;REV__ENSG00000196961|ENST00000354293|AP2A1;REV__ENST00000597774.5_1_19:50303271-50309027:+|nuORF;REV__nc|ENSG00000196961|O95782|AP2A1	51.33545320467046	0.5859736979383976	2				NaN	NaN	0	NaN	1822	2539	4359
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4364	16.25	NaN	9253.8	30	0	2187.9	0.106			+	-1	CKGLNKARPGS	11	77	594.3191724618819	1186.6237919905636	2	594.8204956054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_C(Carbamidomethyl (C))KGLNKARPGS_	REV__ENST00000295190.8_1_2:230924004-230933525:-|nuORF	39.252832667884924	0.5681665794958463	2				NaN	NaN	0	NaN	1823	2539	4359
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4365	16.252	NaN	8059.1	30	0	1005.5	0.106	+			12678	GEKDTAKSL	9	75	474.752299550376	947.490046167552	2	474.7516174316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GEKDTAKSL_	ENSG00000013364|ENST00000357402|MVP	56.632244143249146	0.24168844994051353	2				NaN	NaN	0	NaN	1824	2539	4359
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4366	16.254	NaN	2701.2	30	0	451.59	0.037	+			24545	LGLMVIAAALL	11	41	362.23250427857477	1083.6756834359244	3	362.2326965332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LGLMVIAAALL_	ENSG00000181036|ENST00000368106|FCRL6;nc|ENSG00000181036|Q6DN72-2|FCRL6;nc|ENSG00000181036|Q6DN72-3|FCRL6;nc|ENSG00000181036|Q6DN72-4|FCRL6	33.921630207806714	0.6339809607503234	2				NaN	NaN	0	NaN	1825	2539	4359
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4378	16.28	NaN	9186.4	30	0	697.99	0.214	+			31887	QQCQKKSR	8	71	503.26603804970284	1004.5175231662057	2	503.2664489746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QQCQKKSR_	OAS2|p.I214Sfs*41|1|0.33|ENSG00000111335|chr12:112997526-112997526|A/-|frameshift_variant	60.29395666154354	0.49887135096048313	2				NaN	NaN	0	NaN	1834	2542	4377
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4379	16.283	NaN	9429.9	30	0	1326.6	0.106	+			22400	KTISQAVNK	9	74	494.79296631112624	987.5713796890525	2	494.79278564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTISQAVNK_	ENSG00000061676|ENST00000361354|NCKAP1;ENST00000495619.1_1_2:183822183-183829436:-|nuORF;nc|ENSG00000061676|Q9Y2A7-2|NCKAP1;NCKAP1|p.M725Kfs*19|1|0.04|ENSG00000061676|chr2:182953311-182953312|-/AGAGTATT|frameshift_variant	90.14881205920913	0.06444578693273594	2				NaN	NaN	0	NaN	1835	2542	4377
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4380	16.286	NaN	4418.3	30	0	613.53	0.106	+			39582	STGPITKPK	9	65	464.77690640896463	927.5392598847293	2	464.77679443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STGPITKPK_	ENSG00000103657|ENST00000443617|HERC1;HERC1|p.C2300Hfs*14|1|0.44|ENSG00000103657|chr15:63678017-63678018|AA/-|frameshift_variant;HERC1|p.L3887Pfs*44|1|0.06|ENSG00000103657|chr15:63640394-63640395|-/ATGAATGG|frameshift_variant;HERC1|p.M2237*|1|0.39|ENSG00000103657|chr15:63678206-63678206|T/-|frameshift_variant;HERC1|p.V1879Lfs*26|1|0.37|ENSG00000103657|chr15:63694004-63694004|T/-|frameshift_variant	109.47833844074708	0.029530294723441826	2				NaN	NaN	0	NaN	1836	2542	4377
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4381	16.287	NaN	8555.3	30	0	1290	0.106	+			32978	REEAERQRL	9	55	593.8180341099825	NaN	0	593.818115234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_REEAERQRL_	ENSG00000116871|ENST00000474796|MAP7D1;ENST00000373148.5_1_1:36643158-36645856:+|nuORF;nc|ENSG00000116871|Q3KQU3-2|MAP7D1;nc|ENSG00000116871|Q3KQU3-3|MAP7D1;nc|ENSG00000116871|Q3KQU3-4|MAP7D1;nc|ENSG00000116871|Q3KQU3|MAP7D1	65.15724298150197	0.1273232316122292	2				NaN	NaN	0	NaN	1837	2542	4377
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4382	16.289	NaN	11855	30	0	2875.3	0.106	+			17998	IIAKVTAKK	9	65	486.33423141702195	970.6539099008439	2	486.3341979980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IIAKVTAKK_	ENSG00000155008|ENST00000373173|APOOL	109.47833844074708	0.029530294723441826	2				NaN	NaN	0	NaN	1838	2542	4377
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4383	16.291	NaN	10072	30	0	3167.8	0.106			+	24797	LIKVAAKTK	9	58	324.55830495348647	970.6530854606594	3	324.5585632324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LIKVAAKTK_	REV__ENSG00000164946|ENST00000380880|FREM1;REV__nc|ENSG00000164946|Q5H8C1-2|FREM1;REV__nc|ENSG00000164946|Q5H8C1-3|FREM1	38.80614096846853	0.43426287593479557	2				NaN	NaN	0	NaN	1839	2542	4377
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4384	16.293	NaN	8894.8	30	0	1455.8	0.033	+			45999	VAVATPAKK	9	72	442.7818055328588	883.5490581325176	2	442.7815856933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VAVATPAKK_	ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232323706-232327997:-|nuORF	71.87747018426188	0.13267044672804276	2				NaN	NaN	0	NaN	1840	2542	4377
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4401	16.327	NaN	59541	30	0	11070	0.214	+			48871	VVDAKTLKK	9	81	501.32122011423553	1000.6278872952711	2	501.32110595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVDAKTLKK_	ENSG00000079246|ENST00000392132|XRCC5;ENST00000493706.1_1_2:216990646-216992426:+|nuORF;XRCC5|p.E287Kfs*11|2|0.25|ENSG00000079246|chr2:216127589-216127589|A/-|frameshift_variant;XRCC5|p.Q488Rfs*29|1|0.06|ENSG00000079246|chr2:216141305-216141305|C/-|frameshift_variant	152.06079943815163	0.00638878961959199	2				NaN	NaN	0	NaN	1854	2545	4400
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4402	16.331	NaN	31637	30	0	16393	0.106	+			30876	QEKEEQHQL	9	79	584.7831504113244	1167.5517478894487	2	584.7833862304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QEKEEQHQL_	ENSG00000107581|ENST00000369144|EIF3A;nc|ENSG00000107581|Q14152-2|EIF3A	131.115847015877	0.014647977962315902	2				NaN	NaN	0	NaN	1855	2545	4400
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4403	16.333	NaN	31610	30	0	10264	0.106			+	1718	AGWATPAW	8	65	430.20877091179636	858.4029888903927	2	430.20849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AGWATPAW_	REV__ENST00000485820.1_1_11:66052175-66053099:-|nuORF	37.028477286268924	0.6747514403204248	2				NaN	NaN	0	NaN	1856	2545	4400
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4404	16.334	NaN	24512	30	0	4479.3	0.106	+			39630	STIDPSGTRSK	11	85	574.7993669048224	1147.5841808764446	2	574.7990112304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STIDPSGTRSK_	ENSG00000121931|ENST00000369763|LRIF1	104.06999374311218	0.052272977646279854	2				NaN	NaN	0	NaN	1857	2545	4400
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4405	16.336	NaN	14680	30	0	1669.4	0.106	+			13753	GQDPDSPQH	9	71	490.70708136788386	979.3996098025677	2	490.7067565917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GQDPDSPQH_	ENSG00000178719|ENST00000395068|GRINA	82.7504851949679	0.08565546331141553	2				NaN	NaN	0	NaN	1858	2545	4400
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4406	16.338	NaN	8695.5	30	0	1642.7	0.106			+	47156	VLSDVNQRL	9	66	522.2965507203621	1042.5785485075241	2	522.2962036132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VLSDVNQRL_	REV__tr|U7T4S4|U7T4S4_FUSNUCelldivisionproteinFtsZOS=FusobacteriumnucleatumCTI-5OX=1316586GN=ftsZPE=3SV=1	82.24051045832904	0.08786059719216216	2				NaN	NaN	0	NaN	1859	2545	4400
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4407	16.34	NaN	10070	30	0	1915.4	0.036				-1	PIQASFPSTM	10	71	547.764335487868	NaN	0	547.7652587890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_PIQASFPSTM(Oxidation (M))_	ENST00000596488.1_1_19:49859474-49860832:+|nuORF	37.15910966729921	0.3781637092648983	2				NaN	NaN	0	NaN	1860	2545	4400
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4421	16.369	NaN	60203	30	0	40878	0.214	+			22948	KVQSKVNLK	9	87	348.55707862985884	1042.6494064897765	3	348.5572509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVQSKVNLK_	DYNC1H1|p.F2635Lfs*67|1|0.16|ENSG00000197102|chr14:102017141-102017141|T/-|frameshift_variant;DYNC1H1|p.G1902Vfs*27|2|0.27|ENSG00000197102|chr14:102006154-102006154|G/-|frameshift_variant;DYNC1H1|p.K3112Hfs*3|1|0.31|ENSG00000197102|chr14:102027998-102027999|-/TCACAAG|frameshift_variant;DYNC1H1|p.W4201Gfs*43|1|0.42|ENSG00000197102|chr14:102043958-102043958|G/-|frameshift_variant;ENSG00000197102|ENST00000360184|DYNC1H1	98.62937762414208	0.04060045538121712	2				NaN	NaN	0	NaN	1871	2548	4420
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4422	16.372	NaN	54562	30	0	12329	0.106	+			14161	GSNGTIIRK	9	100	473.27757808303585	944.5406032328717	2	473.2773742675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSNGTIIRK_	ENSG00000117983|ENST00000529681|MUC5B;MUC5B|p.A1645Gfs*130|1|0.48|ENSG00000117983|chr11:1241806-1241807|-/C|frameshift_variant;MUC5B|p.E2447Vfs*233|1|0.15|ENSG00000117983|chr11:1244218-1244219|TG/-|frameshift_variant;MUC5B|p.E2929Gfs*98|1|0.13|ENSG00000117983|chr11:1245660-1245661|-/GC|frameshift_variant;MUC5B|p.P2717Qfs*3|2|0.21|ENSG00000117983|chr11:1245025-1245025|C/-|frameshift_variant;MUC5B|p.P3417Qfs*3|1|0.41|ENSG00000117983|chr11:1247125-1247125|C/-|frameshift_variant;MUC5B|p.S2205Qfs*54|1|0.2|ENSG00000117983|chr11:1243486-1243487|-/C|frameshift_variant;MUC5B|p.S3126Pfs*13|1|0.37|ENSG00000117983|chr11:1246251-1246251|C/-|frameshift_variant;MUC5B|p.S3878Pfs*27|1|0.13|ENSG00000117983|chr11:1248507-1248507|C/-|frameshift_variant;MUC5B|p.S4017Lfs*56|1|0.22|ENSG00000117983|chr11:1248928-1248929|-/C|frameshift_variant;MUC5B|p.T4706Pfs*4|2|0.37|ENSG00000117983|chr11:1250996-1250996|A/-|frameshift_variant	112.41091882917199	0.026537921851008135	2				NaN	NaN	0	NaN	1872	2548	4420
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4423	16.374	NaN	36782	30	0	5019	0.106	+			40489	STYGTHIHEK	10	94	586.7879489992981	NaN	0	586.78857421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STYGTHIHEK_	ENSG00000119203|ENST00000238112|CPSF3	114.8945686534367	0.0172778173622391	2				NaN	NaN	0	NaN	1873	2548	4420
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4424	16.376	NaN	64735	30	0	26064	0.106	+			25837	LSDYPWFHG	9	73	561.2566823325798	1120.4988117319594	2	561.2569580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSDYPWFHG_	ENSG00000160999|ENST00000444095|SH2B2;nc|ENSG00000160999|O14492-2|SH2B2	40.5726180659479	0.4135428067754104	2				NaN	NaN	0	NaN	1874	2548	4420
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4425	16.378	NaN	31847	30	0	3429.2	0.106	+			41073	SVIKTQETK	9	86	517.2982252431432	1032.5818975530863	2	517.29833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVIKTQETK_	ENSG00000120690|ENST00000239882|ELF1;nc|ENSG00000120690|P32519-2|ELF1	218.73020215598876	1.841076400425484E-08	2				NaN	NaN	0	NaN	1875	2548	4420
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4426	16.38	NaN	45408	30	0	6750.3	0.039	+			6454	AVYGQKEIHRK	11	90	664.875928325367	1327.737303717534	2	664.8757934570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AVYGQKEIHRK_	ENSG00000145907|ENST00000356245|G3BP1;ENST00000413279.1_1_2:136269117-136269381:-|nuORF;ENST00000519832.1_1_5:151166169-151170647:+|nuORF;nc|ENSG00000145907|Q13283-2|G3BP1	139.38205640894643	0.0005577063719173977	2				NaN	NaN	0	NaN	1876	2548	4420
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4427	16.38	NaN	25700	30	0	3925.7	0.145	+			34454	RTYDREGFKK	10	81	650.343043560832	1298.671534188464	2	650.3440551757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RTYDREGFKK_	ENSG00000173598|ENST00000415493|NUDT4;ENSG00000177144|ENST00000322209|NUDT4B	80.45461616416974	0.1919067876629769	2				NaN	NaN	0	NaN	1877	2548	4420
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4444	16.416	NaN	72433	30	0	18998	0.152	+			6445	AVYENAREK	9	77	540.2776312174777	1078.5407095017554	2	540.277587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVYENAREK_	ENSG00000164941|ENST00000523731|INTS8;ENST00000523321.5_1_8:95835614-95871872:+|nuORF;INTS8|p.F279Lfs*6|1|0.34|ENSG00000164941|chr8:94836602-94836602|T/-|frameshift_variant;nc|ENSG00000164941|Q75QN2-2|INTS8	112.10723106719422	0.02684780151337622	2				NaN	NaN	0	NaN	1891	2551	4443
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4445	16.419	NaN	21924	30	0	2078	0.106	+			4015	ATCSRVLNK	9	94	524.7820048810794	1047.5494568289587	2	524.7822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_ATC(Carbamidomethyl (C))SRVLNK_	ENSG00000176853|ENST00000334705|FAM91A1	98.58198989935565	0.04066992115528678	2				NaN	NaN	0	NaN	1892	2551	4443
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4446	16.421	NaN	11630	30	0	4068.1	0.106			+	-1	QEAVDCTPLA	10	70	552.2569967722291	1102.499440611258	2	552.2573852539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_QEAVDC(Carbamidomethyl (C))TPLA_	REV__ENSG00000142733|ENST00000357582|MAP3K6;REV__nc|ENSG00000142733|O95382-2|MAP3K6;REV__nc|ENSG00000142733|O95382-3|MAP3K6	49.44154591367651	0.46214596422418036	2				NaN	NaN	0	NaN	1893	2551	4443
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4447	16.422	NaN	14939	30	0	1665.3	0.106	+			42967	TEKEGKDQEL	10	82	588.7908460006782	1175.5671390681564	2	588.7908325195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TEKEGKDQEL_	ENSG00000137497|ENST00000393695|NUMA1;nc|ENSG00000137497|Q14980-2|NUMA1;nc|ENSG00000137497|Q14980-3|NUMA1;nc|ENSG00000137497|Q14980-4|NUMA1;NUMA1|p.A1067S|1|0.25|ENSG00000137497|chr11:72014304-72014304|C/A|missense_variant;NUMA1|p.K1766Rfs*2|1|0.39|ENSG00000137497|chr11:72007357-72007357|G/-|frameshift_variant;NUMA1|p.L1786Pfs*18|1|0.23|ENSG00000137497|chr11:72007295-72007296|-/G|frameshift_variant	104.42354056486148	0.06456012287859861	2				NaN	NaN	0	NaN	1894	2551	4443
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4448	16.424	NaN	2913.1	30	0	367.5	0.106			+	28902	NQLSKRKR	8	48	343.8812241580463	1028.6218430743388	3	343.88153076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NQLSKRKR_	REV__ENSG00000152217|ENST00000649279|SETBP1;REV__SETBP1|p.F1174Lfs*13|1|0.35|ENSG00000152217|chr18:44952858-44952858|T/-|frameshift_variant;REV__SETBP1|p.G1249Efs*3|1|0.36|ENSG00000152217|chr18:44953080-44953080|A/-|frameshift_variant;REV__SETBP1|p.K939M|1|0.22|ENSG00000152217|chr18:44952156-44952156|A/T|missense_variant	20.94693142431847	0.7975965917238792	2				NaN	NaN	0	NaN	1895	2551	4443
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4449	16.426	NaN	6960.2	30	0	1343.5	0.106	+			21037	KKKNKTKW	8	58	530.8366393790593	1059.6587258249185	2	530.8369750976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KKKNKTKW_	ENST00000420058.1_2_7:102628891-102629017:+|nuORF	51.33545320467046	0.5859736979383976	2				NaN	NaN	0	NaN	1896	2551	4443
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4450	16.428	NaN	7512.7	30	0	1187.1	0.038				-1	FDYHGHMCI	9	51	598.2377277235266	1194.4609025138532	2	598.2378540039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C),Oxidation (M)	_FDYHGHM(Oxidation (M))C(Carbamidomethyl (C))I_	ENSG00000176444|ENST00000368361|CLK2;ENST00000416636.2_1_7:23624683-23625604:-|nuORF;ENST00000497188.1_1_1:155234069-155238352:-|nuORF;nc|ENSG00000176444|P49760-3|CLK2	19.359975847455235	0.6112419832031293	2				NaN	NaN	0	NaN	1897	2551	4443
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4464	16.457	NaN	83151	30	0	21983	0.214	+			15597	GVIKAVDKK	9	84	479.30813607753066	956.6017192218613	2	479.308349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVIKAVDKK_	ENSG00000156508|ENST00000309268|EEF1A1;ENST00000417549.1_1_13:28789725-28790031:+|nuORF;ENST00000419025.1_1_3:183744159-183744318:-|nuORF;ENST00000436459.2_1_9:135895553-135896258:+|nuORF;ENST00000443590.1_1_2:107313789-107313948:-|nuORF;ENST00000513637.1_1_5:43495177-43495438:-|nuORF;ENST00000559385.1_1_15:53229359-53229566:-|nuORF;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	106.68306549817024	0.032382560583716295	2				NaN	NaN	0	NaN	1908	2554	4463
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4465	16.461	NaN	32577	30	0	6780.3	0.106	+			35041	SADNLNAKKLL	11	61	396.2313126126187	1185.672108438056	3	396.2313232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SADNLNAKKLL_	ENSG00000149657|ENST00000279068|LSM14B;nc|ENSG00000149657|Q9BX40-3|LSM14B	42.33807565288922	0.5259510355945483	2				NaN	NaN	0	NaN	1909	2554	4463
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4466	16.463	NaN	34346	30	0	7609.5	0.106	+			2944	ASDPNVSKKLK	11	83	593.8433203543298	1185.6720877754594	2	593.8438720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASDPNVSKKLK_	ENSG00000151474|ENST00000357447|FRMD4A	152.67163325587376	6.606338268086461E-05	2				NaN	NaN	0	NaN	1910	2554	4463
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4467	16.465	NaN	28298	30	0	7579.7	0.106	+			22279	KTCSRRVKIN	10	95	421.243479110779	1260.708607932537	3	421.2433166503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_KTC(Carbamidomethyl (C))SRRVKIN_	ENSG00000182674|ENST00000523207|KCNB2;KCNB2|p.E146Nfs*3|1|0.34|ENSG00000182674|chr8:72568162-72568162|A/-|frameshift_variant;KCNB2|p.E146Rfs*23|1|0.24|ENSG00000182674|chr8:72568161-72568162|-/A|frameshift_variant;KCNB2|p.L44Pfs*38|1|0.35|ENSG00000182674|chr8:72567856-72567857|-/G|frameshift_variant	40.05817265558897	0.5486090488315611	2				NaN	NaN	0	NaN	1911	2554	4463
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4468	16.467	NaN	3103.3	30	0	514.67	0.106			+	35489	SATLLTHPLA	10	37	341.86584183661887	1022.5756961100567	3	341.8659973144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SATLLTHPLA_	REV__ENSG00000172146|ENST00000641732|OR1A1;REV__ENSG00000172150|ENST00000381951|OR1A2;REV__OR1A2|p.L249Ffs*41|1|0.23|ENSG00000172150|chr17:3198257-3198258|-/T|frameshift_variant;REV__OR1A2|p.L249Yfs*14|1|0.32|ENSG00000172150|chr17:3198258-3198258|T/-|frameshift_variant	36.446750945000026	0.5818864909973037	2				NaN	NaN	0	NaN	1912	2554	4463
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4469	16.469	NaN	5137.9	30	0	941.03	0.035			+	37549	SLLWRSSQ	8	52	326.1782716810761	975.5129856434285	3	326.1785583496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLLWRSSQ_	REV__nc|ENSG00000106013|Q92527-2|ANKRD7	17.364965105453717	0.7956685240855921	2				NaN	NaN	0	NaN	1913	2554	4463
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4470	16.469	NaN	30346	30	0	5560.8	0.14	+			6372	AVTYTEHAK	9	84	510.2612961048904	1018.5080392765808	2	510.26226806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AVTYTEHAK_	ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2	136.26810882979174	0.012230845423532208	2				NaN	NaN	0	NaN	1914	2554	4463
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4483	16.498	NaN	57466	30	0	10875	0.214			+	-1	TPNSCGMMAGK	11	93	564.7272178576894	1127.4398827821788	2	564.7281494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_TPNSCGM(Oxidation (M))M(Oxidation (M))AGK_	REV__GALT|p.H184Tfs*35|1|0.26|ENSG00000213930|chr9:34648153-34648153|C/-|frameshift_variant	49.536043120802724	0.4274608637932522	2				NaN	NaN	0	NaN	1924	2557	4482
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4484	16.502	NaN	29378	30	0	4203.2	0.106				-1	 	0	91	631.3605095321908	1260.7064661311815	2	631.361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1925	2557	4482
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4485	16.504	NaN	25863	30	0	4164.8	0.106	+			49876	VYTKKTTKL	9	85	541.334736850974	1080.6549207687478	2	541.3347778320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYTKKTTKL_	ENSG00000148396|ENST00000684901|SEC16A;nc|ENSG00000148396|O15027-2|SEC16A;nc|ENSG00000148396|O15027-3|SEC16A;nc|ENSG00000148396|O15027-4|SEC16A;nc|ENSG00000148396|O15027-5|SEC16A;SEC16A|p.P2155Hfs*25|1|0.25|ENSG00000148396|chr9:136447664-136447664|G/-|frameshift_variant	115.23196543181992	0.024086211614104236	2				NaN	NaN	0	NaN	1926	2557	4482
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4486	16.506	NaN	22554	30	0	6591.1	0.106	+			8718	EEEEQDHGVG	10	70	376.8203646678187	1127.439264603656	3	376.82086181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EEEEQDHGVG_	ENSG00000160551|ENST00000261716|TAOK1;ENST00000577583.1_1_17:27807410-27838022:+|nuORF;nc|ENSG00000160551|Q7L7X3-2|TAOK1;nc|ENSG00000160551|Q7L7X3-3|TAOK1;TAOK1-VMP1|1|fusion	38.753607047826485	0.5606299674732264	2				NaN	NaN	0	NaN	1927	2557	4482
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4487	16.507	NaN	7409.2	30	0	1467.4	0.106	+			43455	TGNDWVPVT	9	57	494.73939063616336	987.4642283391267	2	494.73919677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TGNDWVPVT_	ENSG00000244754|ENST00000267068|N4BP2L2;nc|ENSG00000244754|Q92802-2|N4BP2L2	47.657333605630114	0.33044192980041115	2				NaN	NaN	0	NaN	1928	2557	4482
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4488	16.509	NaN	8021.3	30	0	4108.3	0.106	+			22864	KVKSKLDAE	9	54	339.8692930623437	1016.5860497872311	3	339.8694763183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KVKSKLDAE_	CTNNA3|p.K856Nfs*3|1|0.09|ENSG00000183230|chr10:65920450-65920450|T/-|frameshift_variant;CTNNA3|p.P857Tfs*4|2|0.35|ENSG00000183230|chr10:65920449-65920450|-/T|frameshift_variant;ENSG00000183230|ENST00000433211|CTNNA3;ENST00000373735.1_1_10:67680090-67838726:-|nuORF	25.450171626174864	0.5654022654467333	2				NaN	NaN	0	NaN	1929	2557	4482
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4489	16.511	NaN	16966	30	0	2650.1	0.037	+			30571	QAMWALGDKI	10	97	566.7961853152095	1131.577817697219	2	566.7964477539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QAMWALGDKI_	ACACA|p.E2200Gfs*26|1|0.48|ENSG00000278540|chr17:37097953-37097954|-/T|frameshift_variant;ENSG00000278540|ENST00000616317|ACACA;nc|ENSG00000278540|Q13085-2|ACACA;nc|ENSG00000278540|Q13085-3|ACACA;nc|ENSG00000278540|Q13085|ACACA	71.87747018426188	0.26198133118427214	2				NaN	NaN	0	NaN	1930	2557	4482
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4503	16.541	NaN	151650	30	0	18073	0.148	+			37023	SIQRKLQEK	9	92	565.3379003290215	1128.661247724843	2	565.3380737304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIQRKLQEK_	ENSG00000138640|ENST00000264344|FAM13A;ENST00000508360.5_1_4:89653076-89671014:-|nuORF;ENST00000511573.5_1_4:89649686-89680064:-|nuORF;nc|ENSG00000138640|O94988-1|FAM13A;nc|ENSG00000138640|O94988-3|FAM13A;nc|ENSG00000138640|O94988-5|FAM13A;nc|ENSG00000138640|O94988-6|FAM13A	144.76815839617436	0.008243131458242323	2				NaN	NaN	0	NaN	1941	2560	4502
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4504	16.543	NaN	18703	30	0	3009	0.106	+			29534	PEGENSHDKSG	11	77	578.7473706704774	1155.4801884077547	2	578.7470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PEGENSHDKSG_	MORC4|p.S616G|1|0.29|ENSG00000133131|chrX:106943045-106943045|T/C|missense_variant	59.93077597824379	0.32407304095777845	2				NaN	NaN	0	NaN	1942	2560	4502
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4505	16.545	NaN	21150	30	0	4214	0.106				-1	 	0	68	353.86438122244687	1058.5713142675406	3	353.86456298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1943	2560	4502
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4506	16.547	NaN	12378	30	0	1345.4	0.106	+			35860	SEDKKRPSL	9	75	530.293595804484	1058.5726386757678	2	530.29345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SEDKKRPSL_	ENSG00000140682|ENST00000394863|TGFB1I1;ENST00000564176.5_1_16:31485144-31486093:+|nuORF;ENST00000567066.6_1_16:31483405-31488894:+|nuORF;ENST00000568142.2_1_16:31484766-31486093:+|nuORF;nc|ENSG00000140682|O43294-2|TGFB1I1	75.04331003522576	0.118981335847003	2				NaN	NaN	0	NaN	1944	2560	4502
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4507	16.549	NaN	6667.2	30	0	1469.7	0.106	+			5939	AVLKDRVNK	9	66	521.8221090485004	NaN	0	521.8221435546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVLKDRVNK_	CKAP2L|p.T478Pfs*15|1|0.25|ENSG00000169607|chr2:112752437-112752437|T/-|frameshift_variant;CKAP2L|p.T618Lfs*3|1|0.37|ENSG00000169607|chr2:112740978-112740978|T/-|frameshift_variant;ENSG00000169607|ENST00000302450|CKAP2L;nc|ENSG00000169607|Q8IYA6-3|CKAP2L	123.20810148215591	0.0016355521601317592	2				NaN	NaN	0	NaN	1945	2560	4502
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4508	16.551	NaN	9837.8	30	0	832.28	0.106	+			20942	KKCCVFSCGKK	11	93	701.3432237117601	1400.67189449032	2	701.3413696289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	3 Carbamidomethyl (C)	_KKC(Carbamidomethyl (C))C(Carbamidomethyl (C))VFSC(Carbamidomethyl (C))GKK_	ENSG00000101448|ENST00000354280|EPPIN;nc|ENSG00000249139|O95925-2|EPPIN;nc|ENSG00000249139|O95925-3|EPPIN	56.43379154798735	0.3552884390983883	2				NaN	NaN	0	NaN	1946	2560	4502
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4509	16.552	NaN	3782.3	30	0	2112.8	0.032				-1	 	0	29	413.22709456116115	824.4396361891223	2	413.2267761230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	1947	2560	4502
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4524	16.583	NaN	35028	30	0	5599.7	0.214	+			4146	ATEQPLTAKK	10	90	543.8114674174319	1085.6083819016637	2	543.8117065429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATEQPLTAKK_	ENSG00000120725|ENST00000394817|SIL1	178.54760496737404	0.0013825827145267076	2				NaN	NaN	0	NaN	1959	2563	4523
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4525	16.587	NaN	10144	30	0	1502.2	0.106	+			5871	AVITNKDVRK	10	80	572.3462431529979	1142.6779333727957	2	572.34619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVITNKDVRK_	ENSG00000104408|ENST00000220849|EIF3E	79.07001860377117	0.20321883041390024	2				NaN	NaN	0	NaN	1960	2563	4523
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4526	16.589	NaN	8950	30	0	1324.8	0.106	+			20116	KEKKVINKL	9	67	550.3635918624663	1098.7126307917324	2	550.36376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEKKVINKL_	ENSG00000106031|ENST00000649031|HOXA13	117.5257442709337	0.022697614825424036	2				NaN	NaN	0	NaN	1961	2563	4523
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4527	16.591	NaN	15686	30	0	3083	0.106	+			40720	SVCGKSFHR	9	75	539.2667347217716	1076.5189165103432	2	539.2667846679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_SVC(Carbamidomethyl (C))GKSFHR_	ENSG00000066422|ENST00000312938|ZBTB11;ZBTB11|p.E974Nfs*14|1|0.1|ENSG00000066422|chr3:101651408-101651408|C/-|frameshift_variant	74.1650062923329	0.12277912660386392	2				NaN	NaN	0	NaN	1962	2563	4523
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4528	16.593	NaN	4291.4	30	0	560.12	0.106			+	17926	IGKQIVQQ	8	66	457.2769201152186	912.5392872972373	2	457.2767028808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IGKQIVQQ_	REV__ENSG00000141564|ENST00000306801|RPTOR;REV__nc|ENSG00000141564|Q8N122-3|RPTOR	106.41520541750704	0.2471395129373963	2				NaN	NaN	0	NaN	1963	2563	4523
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4529	16.594	NaN	6631.4	30	0	1094.5	0.035			+	-1	SQEKRFVN	8	68	525.2726510918619	1048.5307492505237	2	525.27294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SQEKRFVN_	REV__ENSG00000167785|ENST00000601372|ZNF558;REV__ENST00000597304.5_1_19:8921959-8932201:-|nuORF;REV__nc|ENSG00000167785|Q96NG5-2|ZNF558;REV__ZNF558|p.P127S|1|0.25|ENSG00000167785|chr19:8812608-8812608|G/A|missense_variant	37.15910966729921	0.6739408393984688	2				NaN	NaN	0	NaN	1964	2563	4523
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4530	16.595	NaN	4697	30	0	462.31	0.144			+	28340	NEIGELIKE	9	61	348.8575121884247	1043.5507071654743	3	348.8576965332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NEIGELIKE_	REV__tr|U7SSK6|U7SSK6_FUSNUSigma-BregulationproteinRsbU(Phosphoserinephosphatase)OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01485PE=4SV=1	51.19269402634007	0.2889735674168909	2				NaN	NaN	0	NaN	1965	2563	4523
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4543	16.626	NaN	6532.4	30	0	1224.1	0.214				-1	LGPPTRSPGG	10	61	490.7614959729507	979.5084390127014	2	490.76116943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LGPPTRSPGG_	ENST00000425202.5_1_19:51162442-51162529:+|nuORF	54.776311868738084	0.41334902933431344	2				NaN	NaN	0	NaN	1975	2566	4542
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4544	16.629	NaN	8458.3	30	0	3575.8	0.106	+			25764	LSAHYIPK	8	59	464.76377977942514	NaN	0	464.76385498046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSAHYIPK_	ENSG00000175175|ENST00000308249|PPM1E	26.79610172149135	1.7418937515398478	2				NaN	NaN	0	NaN	1976	2566	4542
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4545	16.631	NaN	4763.6	30	0	830.08	0.106			+	46541	VFEFEKGP	8	51	476.7431833054388	951.4718136776776	2	476.7430419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VFEFEKGP_	REV__tr|U7T3A9|U7T3A9_FUSNUElongationfactorGOS=FusobacteriumnucleatumCTI-5OX=1316586GN=fusAPE=3SV=1	31.954861631926434	0.7126016770032289	2				NaN	NaN	0	NaN	1977	2566	4542
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4546	16.633	NaN	4165.6	30	0	612.9	0.106	+			45463	TYAGGTASATK	11	55	514.2561896475087	1026.4978263618173	2	514.2562866210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TYAGGTASATK_	CAST|p.E474Kfs*10|1|0.39|ENSG00000153113|chr5:96754695-96754695|A/-|frameshift_variant;ENSG00000153113|ENST00000675179|CAST;ENST00000507487.5_1_5:95998126-96062463:+|nuORF;ENST00000515160.5_1_5:95998126-96031662:+|nuORF;nc|ENSG00000153113|P20810-10|CAST;nc|ENSG00000153113|P20810-5|CAST;nc|ENSG00000153113|P20810-7|CAST;nc|ENSG00000153113|P20810-9|CAST	72.87924865735499	0.21173632944124365	2				NaN	NaN	0	NaN	1978	2566	4542
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4547	16.635	NaN	5635.1	30	0	710.93	0.106	+			15696	GVNATAAAPPQ	11	64	498.7597935933611	NaN	0	498.76434326171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GVNATAAAPPQ_	ENST00000242108.8_1_7:36192946-36193138:+|nuORF	46.45678178249821	0.34076744753725324	2				NaN	NaN	0	NaN	1979	2566	4542
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4548	16.637	NaN	5429.8	30	0	896.59	0.106	+			12348	GDLDVLKQK	9	65	508.2925858671404	1014.5706188010809	2	508.29278564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GDLDVLKQK_	ENSG00000182771|ENST00000327946|GRID1;nc|ENSG00000182771|Q9ULK0-2|GRID1	51.19269402634007	0.2889735674168909	2				NaN	NaN	0	NaN	1980	2566	4542
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4549	16.638	NaN	2609.7	30	0	289.77	0.04			+	-1	YNRWGEVMHY	10	54	685.8017685825316	1369.5889842318632	2	685.8011474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_YNRWGEVM(Oxidation (M))HY_	REV__ENST00000368324.4_1_1:155852837-155852948:+|nuORF	27.882242232435846	0.6521336255503853	2				NaN	NaN	0	NaN	1981	2566	4542
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4563	16.668	NaN	204780	30	0	15406	0.19	+			38867	SSNSYAIKK	9	114	499.26915326648674	996.5237535997735	2	499.26910400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSNSYAIKK_	ENSG00000083845|ENST00000196551|RPS5;ENST00000599232.1_1_19:58906030-58906114:+|nuORF	176.59839592901017	0.0016406035750004123	2				NaN	NaN	0	NaN	1992	2569	4562
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4564	16.671	NaN	42271	30	0	5361.8	0.106	+			3179	ASITPVKSK	9	90	465.78456952400654	929.5545861148131	2	465.7843933105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASITPVKSK_	ENSG00000168386|ENST00000477258|FILIP1L;nc|ENSG00000168386|Q4L180-2|FILIP1L;nc|ENSG00000168386|Q4L180-3|FILIP1L;nc|ENSG00000168386|Q4L180-5|FILIP1L;nc|ENSG00000168386|Q4L180-6|FILIP1L;nc|ENSG00000168386|Q4L180-7|FILIP1L;nc|ENSG00000168386|Q4L180|FILIP1L	117.81106730687013	0.02252488733980868	2				NaN	NaN	0	NaN	1993	2569	4562
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4565	16.674	NaN	26008	30	0	5909.7	0.106	+			36663	SGMGSTVSK	9	70	427.20786976414354	852.4011865950871	2	427.2076110839844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SGMGSTVSK_	ENSG00000132383|ENST00000254719|RPA1;RPA1|p.N274Mfs*5|1|0.18|ENSG00000132383|chr17:1879272-1879272|A/-|frameshift_variant	109.43880257439609	0.029570636687953285	2				NaN	NaN	0	NaN	1994	2569	4562
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4566	16.675	NaN	12797	30	0	1812.1	0.106	+			44923	TVAHKIMQK	9	82	528.305465591211	1054.596378249222	2	528.3056030273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TVAHKIMQK_	ENSG00000134453|ENST00000379888|RBM17	93.5975768576971	0.05472259948179787	2				NaN	NaN	0	NaN	1995	2569	4562
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4567	16.677	NaN	12387	30	0	1322.4	0.106	+			38410	SSAEYSVHK	9	78	504.24316379488926	1006.4717746565785	2	504.24322509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSAEYSVHK_	ENSG00000058085|ENST00000264144|LAMC2;LAMC2|p.V488Sfs*24|1|0.32|ENSG00000058085|chr1:183227688-183227688|G/-|frameshift_variant;nc|ENSG00000058085|Q13753-2|LAMC2	158.07458414430337	0.004987072822166904	2				NaN	NaN	0	NaN	1996	2569	4562
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4568	16.679	NaN	14035	30	0	2145.9	0.106	+			41844	SVSTQQPPK	9	68	486.26133841244723	970.5081238916945	2	486.2611999511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVSTQQPPK_	ENSG00000145012|ENST00000617246|LPP;LPP|p.C364Lfs*29|1|0.29|ENSG00000145012|chr3:188609815-188609816|-/C|frameshift_variant	117.81106730687013	0.02252488733980868	2				NaN	NaN	0	NaN	1997	2569	4562
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4569	16.681	NaN	16497	30	0	1728.6	0.035	+			39110	SSTDINVKK	9	80	496.27468977809815	990.5348266229963	2	496.2744445800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSTDINVKK_	ENSG00000164749|ENST00000396423|HNF4G;nc|ENSG00000164749|Q14541-2|HNF4G;nc|ENSG00000164749|Q14541|HNF4G	141.52041321563706	0.009766778904176347	2				NaN	NaN	0	NaN	1998	2569	4562
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4585	16.712	NaN	43377	30	0	7548.4	0.214	+			5536	AVAIKAMAK	9	80	459.7756695404506	917.5367861477013	2	459.7753601074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_AVAIKAM(Oxidation (M))AK_	EIF5A|p.A145P|1|0.15|ENSG00000132507|chr17:7311608-7311608|G/C|missense_variant;ENSG00000132507|ENST00000336458|EIF5A;ENSG00000253626|ENST00000520547|EIF5AL1;nc|ENSG00000132507|P63241-2|EIF5A	84.9155231211612	0.07920012719736333	2				NaN	NaN	0	NaN	2011	2572	4584
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4586	16.716	NaN	33094	30	0	8317.4	0.106				-1	 	0	64	511.24819572642343	510.24091925982344	1	511.2485656738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2012	2572	4584
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4587	16.718	NaN	15393	30	0	2276.8	0.036			+	-1	WAEGLSWCS	9	68	548.2295703682204	1094.4445878032407	2	548.73193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_WAEGLSWC(Carbamidomethyl (C))S_	REV__ENST00000390609.3_1_14:106725439-106725496:-|nuORF	38.80614096846853	0.43426287593479557	2				NaN	NaN	0	NaN	2013	2572	4584
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4600	16.746	NaN	107890	30	0	17577	0.159	+			2283	ALYSGVHKK	9	89	501.7899904956554	1001.5654280581108	2	501.78997802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ALYSGVHKK_	ENSG00000111961|ENST00000367467|SASH1;SASH1|p.N810Tfs*48|1|0.29|ENSG00000111961|chr6:148543895-148543895|A/-|frameshift_variant	155.5846463517096	0.005567437401040498	2				NaN	NaN	0	NaN	2023	2575	4599
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4601	16.748	NaN	62140	30	0	11571	0.106			+	44432	TSLTCLGGGV	10	80	482.7407591623348	963.4669653914697	2	482.73822021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_TSLTC(Carbamidomethyl (C))LGGGV_	REV__ENST00000525484.5_1_11:8986226-8986655:+|nuORF	106.41520541750704	0.05864542590786676	2				NaN	NaN	0	NaN	2024	2575	4599
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4602	16.751	NaN	63723	30	0	15801	0.106	+			40222	STSENITQK	9	75	504.2538013218738	1006.4930497105477	2	504.2534484863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STSENITQK_	DDX3Y|p.V655Gfs*2|1|0.09|ENSG00000067048|chrY:12918097-12918098|-/G|frameshift_variant;ENSG00000067048|ENST00000336079|DDX3Y;ENSG00000215301|ENST00000644876|DDX3X;nc|ENSG00000067048|O15523-2|DDX3Y;nc|ENSG00000215301|O00571-2|DDX3X	177.3047273071476	0.0015666121956477066	2				NaN	NaN	0	NaN	2025	2575	4599
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4603	16.752	NaN	79330	30	0	10044	0.106	+			13750	GQDHPAPSQD	10	99	526.2257204218078	1050.4368879104154	2	526.226318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GQDHPAPSQD_	BOD1|p.P177H|1|0.24|ENSG00000145919|chr5:173609267-173609267|G/T|missense_variant	54.776311868738084	0.41334902933431344	2				NaN	NaN	0	NaN	2026	2575	4599
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4604	16.754	NaN	63309	30	0	18873	0.106			+	-1	CMPCKHKQ	8	66	516.2330155496663	1030.4514781661326	2	516.23291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_CMPC(Carbamidomethyl (C))KHKQ_	REV__ENSG00000102935|ENST00000563137|ZNF423;REV__nc|ENSG00000102935|Q2M1K9-2|ZNF423;REV__nc|ENSG00000102935|Q2M1K9|ZNF423;REV__ZNF423|p.Q394Rfs*36|1|0.13|ENSG00000102935|chr16:49637973-49637973|C/-|frameshift_variant	42.47446043378293	0.6409579893742323	2				NaN	NaN	0	NaN	2027	2575	4599
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4605	16.756	NaN	187700	30	0	18806	0.106			+	33703	RPEQLAAGV	9	123	470.7643485803842	939.5141442275684	2	470.763916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RPEQLAAGV_	REV__ENSG00000187714|ENST00000374115|SLC18A3;REV__SLC18A3|p.A20D|1|0.42|ENSG00000187714|chr10:49610799-49610799|C/A|missense_variant	87.75429964447693	0.0711966946989736	2				NaN	NaN	0	NaN	2028	2575	4599
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4606	16.758	NaN	13223	30	0	6956.5	0.036	+			16506	HEVDPVRRA	9	48	360.1963745755917	1077.5672943269751	3	360.1965026855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HEVDPVRRA_	ENSG00000118971|ENST00000261254|CCND2;nc|ENSG00000118971|P30279-2|CCND2	19.359975847455235	0.6112419832031293	2				NaN	NaN	0	NaN	2029	2575	4599
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4619	16.786	NaN	56369	30	0	11691	0.213	+			14402	GTAPAFKQK	9	82	474.26900453189484	946.5234561305897	2	474.2687683105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTAPAFKQK_	ENSG00000065534|ENST00000360304|MYLK;ENST00000504946.5_1_3:123400948-123419770:-|nuORF;MYLK|p.P1126Qfs*8|1|0.11|ENSG00000065534|chr3:123700091-123700091|G/-|frameshift_variant;nc|ENSG00000065534|Q15746-11|MYLK;nc|ENSG00000065534|Q15746-2|MYLK;nc|ENSG00000065534|Q15746-3|MYLK;nc|ENSG00000065534|Q15746-4|MYLK;nc|ENSG00000065534|Q15746-5|MYLK;nc|ENSG00000065534|Q15746-6|MYLK;nc|ENSG00000065534|Q15746-7|MYLK	98.62937762414208	0.04060045538121712	2				NaN	NaN	0	NaN	2039	2578	4618
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4620	16.789	NaN	34834	30	0	3285.6	0.106	+			39222	STAGRVIGK	9	90	444.7666919526955	887.518830972191	2	444.76654052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STAGRVIGK_	ENSG00000073792|ENST00000382199|IGF2BP2;ENST00000435000.2_1_1:146523764-146523956:+|nuORF;ENST00000440915.1_1_8:100245318-100245837:-|nuORF;ENST00000464166.1_1_3:185364758-185367298:-|nuORF;ENST00000550858.1_1_12:42681771-42682359:+|nuORF;nc|ENSG00000073792|Q9Y6M1-1|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-3|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-4|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-5|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-6|IGF2BP2	88.17693792209575	0.07000514020414955	2				NaN	NaN	0	NaN	2040	2578	4618
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4621	16.791	NaN	25167	30	0	2709.7	0.106			+	6825	CHSNSEPHK	9	75	519.7247577554774	1037.4349625777547	2	519.724853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_CHSNSEPHK_	REV__ENSG00000136367|ENST00000419474|ZFHX2;REV__nc|ENSG00000136367|Q9C0A1-2|ZFHX2	47.657333605630114	0.33044192980041115	2				NaN	NaN	0	NaN	2041	2578	4618
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4622	16.793	NaN	40464	30	0	11092	0.106	+			8682	EEACDMVL	8	67	455.18850604981367	908.3624591664274	2	455.1883850097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EEACDMVL_	PRPF31|p.A194V|1|0.27|ENSG00000105618|chr19:54123802-54123802|C/T|missense_variant	42.47446043378293	0.6409579893742323	2				NaN	NaN	0	NaN	2042	2578	4618
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4623	16.795	NaN	48505	30	0	5350.1	0.106			+	30201	PSPTQIAR	8	81	435.24557334127036	868.4765937493407	2	435.2454528808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PSPTQIAR_	REV__ENST00000528737.5_1_11:58912187-58912370:+|nuORF	111.64827973302667	0.24425243057279236	2				NaN	NaN	0	NaN	2043	2578	4618
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4624	16.797	NaN	47100	30	0	10533	0.106	+			14059	GSIKGELRK	9	86	494.3009295945623	986.5873062559247	2	494.30084228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GSIKGELRK_	CHD1|p.E1321Kfs*22|3|0.3|ENSG00000153922|chr5:98870705-98870705|T/-|frameshift_variant;CHD1|p.E1321Rfs*17|1|0.48|ENSG00000153922|chr5:98870704-98870705|-/T|frameshift_variant;CHD1|p.V947Tfs*15|1|0.21|ENSG00000153922|chr5:98882003-98882004|CT/-|frameshift_variant;ENSG00000153922|ENST00000614616|CHD1;nc|ENSG00000153922|O14646-2|CHD1	88.17693792209575	0.07000514020414955	2				NaN	NaN	0	NaN	2044	2578	4618
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4625	16.798	NaN	21129	30	0	3950.4	0.036			+	-1	GSMIMCEDI	9	67	536.2127462997728	1070.4109396663455	2	536.2117309570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C),Oxidation (M)	_GSMIM(Oxidation (M))C(Carbamidomethyl (C))EDI_	REV__FBN2|p.N1250S|1|0.14|ENSG00000138829|chr5:128335553-128335553|T/C|missense_variant	38.80614096846853	0.43426287593479557	2				NaN	NaN	0	NaN	2045	2578	4618
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4636	16.823	NaN	55461	30	0	3549.3	0.193	+			5484	AVAAVAARR	9	90	442.77480188367844	883.5350508341569	2	442.7746887207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVAAVAARR_	ENSG00000089597|ENST00000356638|GANAB;ENST00000526392.1_1_11:62402291-62414071:-|nuORF;ENST00000534419.1_1_11:62407519-62414080:-|nuORF;GANAB|p.L23*|4|0.22|ENSG00000089597|chr11:62639702-62639702|A/-|frameshift_variant;nc|ENSG00000089597|Q14697-2|GANAB;nc|ENSG00000089597|Q14697-3|GANAB	187.93214206719585	0.0004997520599339083	2				NaN	NaN	0	NaN	2053	2581	4635
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4637	16.827	NaN	54148	30	0	6954	0.106	+			21852	KRKEQTEKH	9	93	592.3307394215101	1182.64692590982	2	592.3307495117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KRKEQTEKH_	ANKRD11|p.D1104Mfs*214|1|0.28|ENSG00000167522|chr16:89283233-89283233|T/-|frameshift_variant;ANKRD11|p.E1199Rfs*119|1|0.34|ENSG00000167522|chr16:89282948-89282948|T/-|frameshift_variant;ANKRD11|p.I1115Tfs*203|1|0.24|ENSG00000167522|chr16:89283198-89283198|A/-|frameshift_variant;ENSG00000167522|ENST00000301030|ANKRD11;ENST00000330736.9_1_16:89334888-89371640:-|nuORF	60.97194046774394	0.20551255781574032	2				NaN	NaN	0	NaN	2054	2581	4635
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4638	16.829	NaN	33629	30	0	7443.2	0.106				-1	 	0	77	577.8038945429166	1153.5932361526332	2	577.8037719726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2055	2581	4635
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4639	16.831	NaN	28115	30	0	11790	0.106	+			32513	QVQPVDGATRK	11	85	599.8306392202429	1197.6467255072857	2	599.83056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QVQPVDGATRK_	ENSG00000182307|ENST00000331434|C8orf33;ENST00000524395.5_1_8:146277890-146279540:+|nuORF;ENST00000530455.5_1_8:146277890-146279540:+|nuORF;ENST00000534350.5_1_8:146279384-146279540:+|nuORF;nc|nan|Q9H7E9-2|C8orf33	125.71293069911285	0.009199108266606413	2				NaN	NaN	0	NaN	2056	2581	4635
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4640	16.832	NaN	19710	30	0	1744.4	0.106				-1	APSAVHCKPMM	11	82	614.7853819343854	1227.5562109355708	2	614.7849731445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_APSAVHC(Carbamidomethyl (C))KPMM_	LGI3|p.V287M|1|0.31|ENSG00000168481|chr8:22148948-22148948|C/T|missense_variant	30.317721548370564	0.6717830234747728	2				NaN	NaN	0	NaN	2057	2581	4635
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4641	16.834	NaN	11417	30	0	1084.3	0.106	+			5601	AVCEKTFKH	9	67	560.284286615513	1118.554020297826	2	560.2848510742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_AVC(Carbamidomethyl (C))EKTFKH_	ENSG00000166188|ENST00000299237|ZNF319	67.49366992349736	0.1516260258713357	2				NaN	NaN	0	NaN	2058	2581	4635
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4642	16.836	NaN	12810	30	0	3636.2	0.037			+	37534	SLLRSQLQR	9	54	367.5557810309222	1099.6455136929667	3	367.55596923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SLLRSQLQR_	REV__ENSG00000142207|ENST00000382751|URB1	46.45678178249821	0.34452392205506005	2				NaN	NaN	0	NaN	2059	2581	4635
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4655	16.864	NaN	22155	30	0	3377.3	0.214	+			46109	VDGKTIKAQ	9	69	480.2794847496515	958.544416566103	2	480.2793884277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VDGKTIKAQ_	ENSG00000103769|ENST00000261890|RAB11A;ENSG00000185236|ENST00000328024|RAB11B;ENST00000598706.1_1_19:8455252-8465174:+|nuORF;nc|ENSG00000103769|P62491-2|RAB11A;nc|ENSG00000185236|Q15907-2|RAB11B;RAB11A|p.I53T|1|0.1|ENSG00000103769|chr15:65877449-65877449|T/C|missense_variant	107.00750918261382	0.032051501805654005	2				NaN	NaN	0	NaN	2069	2584	4654
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4656	16.867	NaN	11920	30	0	1392.3	0.106	+			5505	AVAEDGGLKK	10	70	494.27711162370827	986.5396703142166	2	494.27685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVAEDGGLKK_	ENSG00000137692|ENST00000260247|DCUN1D5;ENST00000529076.1_1_11:102960023-102962823:-|nuORF	90.60085204095205	0.12763388345653318	2				NaN	NaN	0	NaN	2070	2584	4654
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4657	16.869	NaN	11115	30	0	887.35	0.106	+			13745	GQCGPVGVRK	10	80	529.2822207306406	1056.549888528081	2	529.2824096679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_GQC(Carbamidomethyl (C))GPVGVRK_	ENSG00000204231|ENST00000374680|RXRB;nc|ENSG00000204231|P28702-3|RXRB;RXRB|p.G327Vfs*10|1|0.45|ENSG00000204231|chr6:33196447-33196447|C/-|frameshift_variant;RXRB|p.P176Lfs*4|1|0.65|ENSG00000204231|chr6:33198421-33198421|G/-|frameshift_variant	118.74307786436346	0.029104951601466193	2				NaN	NaN	0	NaN	2071	2584	4654
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4658	16.871	NaN	5956	30	0	1025.4	0.106			+	32551	QVTKTIKK	8	73	473.30811737523464	944.6016818172693	2	473.30792236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QVTKTIKK_	REV__ASPM|p.I3229Nfs*2|1|0.48|ENSG00000066279|chr1:197090339-197090340|-/T|frameshift_variant;REV__ASPM|p.M2261*|1|0.44|ENSG00000066279|chr1:197102470-197102470|T/-|frameshift_variant;REV__ASPM|p.Q2620Nfs*22|1|0.15|ENSG00000066279|chr1:197101393-197101394|-/TT|frameshift_variant;REV__ASPM|p.Q2620Tfs*17|1|0.19|ENSG00000066279|chr1:197101393-197101394|-/T|frameshift_variant;REV__ENSG00000066279|ENST00000367409|ASPM	54.776311868738084	0.5534952410049249	2				NaN	NaN	0	NaN	2072	2584	4654
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4659	16.873	NaN	6641.9	30	0	878.98	0.106			+	19345	KAKLSEPK	8	67	450.77932822410656	899.5441035150131	2	450.7790222167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KAKLSEPK_	REV__ENSG00000087299|ENST00000267436|L2HGDH;REV__nc|ENSG00000087299|Q9H9P8-2|L2HGDH	44.377184641726394	0.6291511924298419	2				NaN	NaN	0	NaN	2073	2584	4654
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4660	16.875	NaN	9146.7	30	0	1317.7	0.106	+			15080	GTQAIAHIHNK	11	75	595.3252780823032	1188.6360032314062	2	595.3255004882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTQAIAHIHNK_	ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1	80.870553263523	0.1451153566872633	2				NaN	NaN	0	NaN	2074	2584	4654
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4661	16.877	NaN	7433.5	30	0	2089.3	0.039			+	-1	QVMRKVSRNK	10	60	421.243479110779	1260.708607932537	3	421.2430419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_QVM(Oxidation (M))RKVSRNK_	REV__ENST00000565598.2_1_16:53404936-53406966:-|nuORF	41.42661286455405	0.5359995577334734	2				NaN	NaN	0	NaN	2075	2584	4654
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4675	16.906	NaN	263430	30	0	52506	0.201	+			3025	ASFDKAKLKK	10	100	379.23254259327337	1134.67579838002	3	379.2325744628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASFDKAKLKK_	ENSG00000034510|ENST00000233143|TMSB10	63.42647028704847	0.33467688528802414	2				NaN	NaN	0	NaN	2086	2587	4674
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4676	16.91	NaN	101900	30	0	29383	0.106	+			3026	ASFDKAKLKK	10	98	568.3455075526174	1134.6764621720347	2	568.3453979492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASFDKAKLKK_	ENSG00000034510|ENST00000233143|TMSB10	161.51181693189292	0.006384248322647003	2				NaN	NaN	0	NaN	2087	2587	4674
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4677	16.912	NaN	27589	30	0	5260.5	0.106	+			36885	SIGPVGKSK	9	89	436.7635855152042	871.5126180972085	2	436.7634582519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SIGPVGKSK_	ENSG00000064787|ENST00000688948|BCAS1;nc|ENSG00000064787|O75363-2|BCAS1;nc|ENSG00000064787|O75363|BCAS1	83.6470233535746	0.08277643980271215	2				NaN	NaN	0	NaN	2088	2587	4674
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4678	16.913	NaN	15891	30	0	2858.1	0.106	+			5040	ATSGGSAEQIK	11	77	524.7671300661583	1047.5197071991165	2	524.7672119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATSGGSAEQIK_	ENSG00000114030|ENST00000344337|KPNA1	107.45493779368988	0.045275086874925735	2				NaN	NaN	0	NaN	2089	2587	4674
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4679	16.915	NaN	26501	30	0	6848.4	0.106	+			35625	SCCPVGCSKC	10	80	522.1918763334759	1042.3691997337517	2	522.19287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_SCC(Carbamidomethyl (C))PVGCSKC_	ENSG00000198417|ENST00000334350|MT1F;ENST00000564295.1_1_16:56692857-56693073:+|nuORF	88.17693792209575	0.14151128060301246	2				NaN	NaN	0	NaN	2090	2587	4674
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4680	16.917	NaN	13517	30	0	2622.5	0.106	+			35626	SCCPVGCSKC	10	70	348.4634337316612	1042.3684717951837	3	348.8890075683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_SCC(Carbamidomethyl (C))PVGCSKC_	ENSG00000198417|ENST00000334350|MT1F;ENST00000564295.1_1_16:56692857-56693073:+|nuORF	55.08391021199286	0.41055145962533396	2				NaN	NaN	0	NaN	2091	2587	4674
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4681	16.919	NaN	8232.9	30	0	1060.2	0.034			+	13569	GLTEKLKQ	8	71	458.77680975112287	915.5390665690458	2	458.78057861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GLTEKLKQ_	REV__nc|ENSG00000102271|Q9C0H6-2|KLHL4	53.351449002276354	0.5676011784961348	2				NaN	NaN	0	NaN	2092	2587	4674
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4694	16.946	NaN	43452	30	0	9675.4	0.214	+			35627	SCCPVGCSKC	10	98	348.4634337316612	1042.3684717951837	3	348.4639892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SCC(Carbamidomethyl (C))PVGCSKC_	ENSG00000198417|ENST00000334350|MT1F;ENST00000564295.1_1_16:56692857-56693073:+|nuORF	66.9202029811203	0.3029018092171124	2				NaN	NaN	0	NaN	2102	2590	4693
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4695	16.949	NaN	8685	30	0	1585.7	0.106	+			43128	TERQKVHCL	9	69	390.87311636488016	1169.5975196948405	3	390.8731384277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_TERQKVHC(Carbamidomethyl (C))L_	ENSG00000110367|ENST00000534980|DDX6	60.97194046774394	0.20551255781574032	2				NaN	NaN	0	NaN	2103	2590	4693
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4696	16.951	NaN	8991.6	30	0	3438	0.106			+	37789	SLYLFLFKE	9	69	580.3250237064312	1158.6354944796624	2	580.32470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLYLFLFKE_	REV__ENSG00000268964|ENST00000601417|ERVV-2;REV__ENSG00000269526|ENST00000602168|ERVV-1	26.063383197487333	0.5596714774181829	2				NaN	NaN	0	NaN	2104	2590	4693
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4697	16.953	NaN	9726.7	30	0	2927	0.106	+			42738	TDKRFQPV	8	66	330.85016612400176	989.5286689722053	3	330.85040283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TDKRFQPV_	ENSG00000104388|ENST00000262646|RAB2A;ENSG00000129472|ENST00000397762|RAB2B;ENST00000429861.5_1_8:61471430-61504606:+|nuORF;ENST00000475857.1_1_14:21942908-21945031:-|nuORF;ENST00000481569.1_1_8:61429766-61471511:+|nuORF;ENST00000485996.1_1_14:21944657-21945031:-|nuORF	26.79610172149135	0.7524337208463756	2				NaN	NaN	0	NaN	2105	2590	4693
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4698	16.955	NaN	9890.3	30	0	1367.2	0.106				-1	SCCNNSHM	8	73	534.1717623023469	1066.3289716714937	2	534.1721801757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term),2 Carbamidomethyl (C),Oxidation (M)	_(Acetyl (Protein N-term))SC(Carbamidomethyl (C))C(Carbamidomethyl (C))NNSHM(Oxidation (M))_	L1ME1_dup14741|chr8:25510836-25512219:-|1.4707505823140987|0.2188578600898351|2.75|482.0|105|3|anti-sense	19.359975847455235	0.7988239741663654	2				NaN	NaN	0	NaN	2106	2590	4693
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4699	16.957	NaN	3983.9	30	0	954.76	0.106	+			49509	VWKISPLFK	9	49	373.22928296046763	1116.666019481603	3	373.2294616699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VWKISPLFK_	ENSG00000011083|ENST00000230671|SLC6A7;SLC6A7|p.F324Lfs*76|1|0.37|ENSG00000011083|chr5:150202585-150202586|-/C|frameshift_variant	24.519189625965996	0.574102787014149	2				NaN	NaN	0	NaN	2107	2590	4693
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4700	16.958	NaN	3710.4	30	0	843.98	0.036	+			36517	SFDKAKLKK	9	44	355.5534602731875	1063.6385514197625	3	355.55352783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SFDKAKLKK_	CON__P21752;ENSG00000034510|ENST00000233143|TMSB10	32.81241826257853	0.4965981579233955	2				NaN	NaN	0	NaN	2108	2590	4693
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4711	16.984	NaN	22187	30	0	3265.7	0.214	+			45685	VAAEKSFNK	9	99	497.27150794025636	992.5284629473127	2	497.2716064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VAAEKSFNK_	ENSG00000086589|ENST00000199814|RBM22;ENST00000520132.1_1_5:150071315-150073858:-|nuORF;nc|ENSG00000086589|Q9NW64-2|RBM22	158.07458414430337	0.004987072822166904	2				NaN	NaN	0	NaN	2116	2593	4710
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4712	16.988	NaN	16216	30	0	6966.7	0.106				-1	IDDCMEKFSLH	11	72	697.8075620314513	1393.6005711297025	2	697.8054809570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_IDDC(Carbamidomethyl (C))MEKFSLH_	ENSG00000136111|ENST00000377636|TBC1D4;nc|ENSG00000136111|O60343-2|TBC1D4;nc|ENSG00000136111|O60343-3|TBC1D4;TBC1D4|p.H517Pfs*9|1|0.07|ENSG00000136111|chr13:75341186-75341187|-/TCTTTAG|frameshift_variant	17.468008924990375	0.788697330333842	2				NaN	NaN	0	NaN	2117	2593	4710
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4713	16.99	NaN	6702.2	30	0	908.66	0.106	+			763	AEEKLTHKM	9	66	543.7845619828997	NaN	0	543.7843627929688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEEKLTHKM_	ENSG00000117632|ENST00000455785|STMN1;ENST00000465604.1_1_1:26227509-26228203:-|nuORF;ENST00000485226.1_1_1:26227942-26230296:-|nuORF;nc|ENSG00000117632|P16949-2|STMN1	68.84614121027924	0.11159004992091766	2				NaN	NaN	0	NaN	2118	2593	4710
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4714	16.992	NaN	8879.8	30	0	1590.5	0.106	+			3490	ASSHVPIQK	9	61	322.85022233541514	965.5288376064454	3	322.8503112792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASSHVPIQK_	ENSG00000158290|ENST00000371322|CUL4B;nc|ENSG00000158290|Q13620|CUL4B	52.936696900407355	0.27249468807391813	2				NaN	NaN	0	NaN	2119	2593	4710
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4715	16.994	NaN	18829	30	0	3425.7	0.106	+			32962	REDNQTNRL	9	78	573.2868972025458	1144.5592414718915	2	573.2864990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_REDNQTNRL_	ENSG00000087460|ENST00000371085|GNAS;ENST00000313949.11_1_20:57415898-57485881:+|nuORF;ENST00000371075.7_3_20:57415898-57485881:+|nuORF;ENST00000476196.5_1_20:57478538-57485881:+|nuORF;ENST00000477931.5_1_20:57464155-57485881:+|nuORF;ENST00000480975.5_1_20:57464272-57485881:+|nuORF;ENST00000496934.5_1_20:57473969-57485881:+|nuORF;nc|ENSG00000087460|P63092-2|GNAS;nc|ENSG00000087460|P63092-3|GNAS;nc|ENSG00000087460|P63092-4|GNAS;nc|ENSG00000087460|Q5JWF2-2|GNAS;nc|ENSG00000087460|Q5JWF2|GNAS	129.42129120953632	0.01549634589885217	2				NaN	NaN	0	NaN	2120	2593	4710
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4716	16.995	NaN	5198.4	30	0	1636.5	0.106	+			15590	GVHRGRSQ	8	67	448.7432625209993	895.4719721087986	2	448.7428283691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GVHRGRSQ_	ENST00000303586.11_1_19:35417916-35418045:+|nuORF	31.954861631926434	0.7126016770032289	2				NaN	NaN	0	NaN	2121	2593	4710
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4717	16.997	NaN	9240.8	30	0	1383.3	0.034	+			3491	ASSHVPIQK	9	69	483.7715156726345	965.528478412069	2	483.7716979980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASSHVPIQK_	ENSG00000158290|ENST00000371322|CUL4B;nc|ENSG00000158290|Q13620|CUL4B	56.43379154798735	0.2433427591689151	2				NaN	NaN	0	NaN	2122	2593	4710
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4729	17.023	NaN	27330	30	0	6168.6	0.214	+			14628	GTGNMEIKK	9	82	489.25776921466127	976.5009854961226	2	489.2577819824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTGNMEIKK_	ENSG00000138496|ENST00000682323|PARP9;nc|ENSG00000138496|Q8IXQ6-3|PARP9;nc|ENSG00000138496|Q8IXQ6|PARP9;PARP9|p.T633Pfs*5|2|0.22|ENSG00000138496|chr3:122537047-122537047|T/-|frameshift_variant	131.61620852596164	0.014413238321579053	2				NaN	NaN	0	NaN	2131	2596	4728
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4730	17.026	NaN	15199	30	0	7164.9	0.106	+			22788	KVFGGTVHK	9	84	324.85898702282975	NaN	0	324.8590393066406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVFGGTVHK_	ENSG00000163655|ENST00000496455|GMPS;GMPS|p.S473Lfs*26|1|0.37|ENSG00000163655|chr3:155922281-155922281|T/-|frameshift_variant;nc|ENSG00000163655|P49915-2|GMPS	56.43379154798735	0.16452882468284893	2				NaN	NaN	0	NaN	2132	2596	4728
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4731	17.028	NaN	17412	30	0	3774.4	0.106			+	11723	FSCSERSSIPG	11	68	585.2663476497805	1168.518142366361	2	585.2662963867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FSCSERSSIPG_	REV__chr13:43055543-43065686|203|11.27|0.22|5.7|+|2|TE_info:LTR19C,LTR19C_dup94,ERV1,LTR,donor,+,43054751,43055543|None,DNAJC15|15;REV__chr13:43055543-43068930|142|16.39|0.22|6.25|+|2|TE_info:LTR19C,LTR19C_dup94,ERV1,LTR,donor,+,43054751,43055543|None,DNAJC15|15	42.86426827375447	0.5187511139693657	2				NaN	NaN	0	NaN	2133	2596	4728
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4732	17.03	NaN	15047	30	0	3999	0.106	+			22789	KVFGGTVHK	9	72	486.78477758539424	NaN	0	486.7847900390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KVFGGTVHK_	ENSG00000163655|ENST00000496455|GMPS;GMPS|p.S473Lfs*26|1|0.37|ENSG00000163655|chr3:155922281-155922281|T/-|frameshift_variant;nc|ENSG00000163655|P49915-2|GMPS	109.47833844074708	0.010168233843482827	2				NaN	NaN	0	NaN	2134	2596	4728
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4733	17.032	NaN	11223	30	0	3101.5	0.106			+	23792	LCLSTFKQ	8	63	498.7637733871944	NaN	0	498.76397705078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_LC(Carbamidomethyl (C))LSTFKQ_	REV__nc|ENSG00000108641|Q9UPM9-2|B9D1	63.30626980617807	1.7418937515398478	2				NaN	NaN	0	NaN	2135	2596	4728
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4734	17.034	NaN	13062	30	0	2139	0.106	+			20359	KESKEAAQL	9	73	502.2745683702482	1002.5345838072964	2	502.2745056152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KESKEAAQL_	AP1G2|p.L755Cfs*3|1|0.18|ENSG00000213983|chr14:23559844-23559844|G/-|frameshift_variant;AP1G2|p.N690Tfs*6|1|0.41|ENSG00000213983|chr14:23560343-23560343|T/-|frameshift_variant;ENSG00000213983|ENST00000397120|AP1G2;ENST00000460049.6_1_14:24028960-24033376:-|nuORF;ENST00000535852.6_1_14:24028960-24035624:-|nuORF	109.82975700811294	0.02917171107062681	2				NaN	NaN	0	NaN	2136	2596	4728
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4735	17.036	NaN	15899	30	0	3239.4	0.036	+			41972	SVYAGGRGPAK	11	77	531.78826977356	1061.56198661392	2	531.7886962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVYAGGRGPAK_	ENST00000296473.7_3_3:49967084-49967270:-|nuORF	106.68306549817024	0.04687082315084998	2				NaN	NaN	0	NaN	2137	2596	4728
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4749	17.065	NaN	16041	30	0	1702.1	0.214	+			37006	SIQDKGSIQK	10	84	552.3066757800451	1102.5987986268901	2	552.3070068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIQDKGSIQK_	ENSG00000106348|ENST00000338791|IMPDH1;ENST00000469328.5_1_7:128033063-128040541:-|nuORF;ENST00000484496.5_1_7:128032984-128040541:-|nuORF;nc|ENSG00000106348|P20839-2|IMPDH1;nc|ENSG00000106348|P20839-3|IMPDH1;nc|ENSG00000106348|P20839-4|IMPDH1;nc|ENSG00000106348|P20839-5|IMPDH1;nc|ENSG00000106348|P20839-7|IMPDH1;nc|ENSG00000106348|P20839|IMPDH1	94.4091291819064	0.10583072883246657	2				NaN	NaN	0	NaN	2148	2599	4748
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4750	17.068	NaN	9169.4	30	0	1899.6	0.106	+			22712	KVAPAPAVVKK	11	73	369.91308301587117	NaN	0	369.9130554199219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVAPAPAVVKK_	ENSG00000148303|ENST00000323345|RPL7A;ENST00000424041.1_1_20:36073469-36073910:-|nuORF;ENST00000463740.5_1_9:136215098-136217195:+|nuORF	88.1336951990783	0.047502131456091834	2				NaN	NaN	0	NaN	2149	2599	4748
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4751	17.07	NaN	10394	30	0	1676	0.106	+			20123	KEKLKNKH	8	75	512.8168283138202	1023.6191036944405	2	512.8168334960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEKLKNKH_	ENST00000359028.6_1_7:91671982-91672039:+|nuORF	50.0245360154114	0.5941082100236891	2				NaN	NaN	0	NaN	2150	2599	4748
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4752	17.072	NaN	37145	30	0	7892.3	0.106	+			23076	KVVDLANKK	9	86	507.81886452711495	1013.6231761210299	2	507.8188171386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KVVDLANKK_	ENSG00000104413|ENST00000433389|ESRP1;ESRP1|p.L333Sfs*55|1|0.35|ENSG00000104413|chr8:94668009-94668009|G/-|frameshift_variant;ESRP1|p.N512Hfs*7|2|0.33|ENSG00000104413|chr8:94674383-94674384|AA/-|frameshift_variant;ESRP1|p.N512Kfs*8|1|0.48|ENSG00000104413|chr8:94674382-94674383|-/A|frameshift_variant;ESRP1|p.N512Tfs*2|2|0.36|ENSG00000104413|chr8:94674383-94674383|A/-|frameshift_variant;nc|ENSG00000104413|Q6NXG1-2|ESRP1;nc|ENSG00000104413|Q6NXG1-3|ESRP1;nc|ENSG00000104413|Q6NXG1-4|ESRP1;nc|ENSG00000104413|Q6NXG1-5|ESRP1	192.63874173313192	6.445838941594963E-05	2				NaN	NaN	0	NaN	2151	2599	4748
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4753	17.074	NaN	3386.8	30	0	806.86	0.106	+			1731	AHKLLTRVS	9	51	342.21339592293424	1023.6183583690027	3	342.21356201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AHKLLTRVS_	TRPM2|p.Q702H|1|0.26|ENSG00000142185|chr21:44399339-44399339|G/T|missense_variant	18.324413293986947	0.6112419832031293	2				NaN	NaN	0	NaN	2152	2599	4748
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4754	17.076	NaN	13436	30	0	2257.2	0.035				-1	 	0	69	495.7510883609526	989.4876237887053	2	495.75079345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2153	2599	4748
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4755	17.076	NaN	4711.8	30	0	601.76	0.139	+			13836	GQSLESVTT	9	64	461.2304640721674	920.4463752111349	2	461.230224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GQSLESVTT_	C2CD3|p.T271_L272insTY|1|0.05|ENSG00000168014|chr11:74138861-74138862|-/GTATGT|inframe_insertion	71.29570347882199	0.13518600952103718	2				NaN	NaN	0	NaN	2154	2599	4748
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4770	17.11	NaN	52661	30	0	17649	0.214	+			38255	SQNPRFYHK	9	90	588.7993121176813	1175.5840713021626	2	588.7992553710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SQNPRFYHK_	ENSG00000132522|ENST00000380728|GPS2;ENST00000571697.5_1_17:7216077-7216449:-|nuORF;ENST00000573807.5_1_17:7216077-7216773:-|nuORF;ENST00000574458.1_1_17:7216077-7216212:-|nuORF	86.88156770896713	0.07365720931774442	2				NaN	NaN	0	NaN	2166	2602	4769
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4771	17.113	NaN	14288	30	0	1546.9	0.106			+	13118	GGGKAGAF	8	58	332.6741312639444	663.3337095946888	2	332.67425537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GGGKAGAF_	REV__ENST00000424404.1_1_7:121947107-121947290:+|nuORF	4.316272785109212	0.7769738875864834	2				NaN	NaN	0	NaN	2167	2602	4769
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4772	17.116	NaN	9833	30	0	1886	0.106	+			2213	ALQIPLPTR	9	70	336.8776085928856	1007.610996378857	3	336.8778076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ALQIPLPTR_	ENSG00000163660|ENST00000295926|CCNL1;ENST00000464679.5_1_3:156867272-156869982:-|nuORF;ENST00000470121.5_1_3:156866032-156869342:-|nuORF;ENST00000474539.5_1_3:156866032-156868247:-|nuORF;ENST00000476367.5_1_3:156867074-156874849:-|nuORF;ENST00000481173.1_1_3:156867820-156868247:-|nuORF;nc|ENSG00000163660|Q9UK58-6|CCNL1	19.996771675451527	0.6112419832031292	2				NaN	NaN	0	NaN	2168	2602	4769
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4773	17.117	NaN	5886.4	30	0	841.08	0.106			+	-1	EACVKAIRS	9	67	517.2764741910236	1032.538395448847	2	517.276611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_EAC(Carbamidomethyl (C))VKAIRS_	REV__ENSG00000075539|ENST00000358350|FRYL;REV__FRYL|p.K2264Qfs*11|1|0.13|ENSG00000075539|chr4:48531269-48531270|-/G|frameshift_variant;REV__FRYL|p.P2464Efs*13|1|0.04|ENSG00000075539|chr4:48523032-48523033|-/TATACAATTC|frameshift_variant	60.97194046774394	0.20551255781574032	2				NaN	NaN	0	NaN	2169	2602	4769
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4774	17.119	NaN	5273.6	30	0	621.36	0.106				-1	 	0	54	400.7134553276449	799.4123577220898	2	400.71331787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2170	2602	4769
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4775	17.121	NaN	9773.2	30	0	1813.9	0.035	+			31129	QGDFLPGCEG	10	68	511.7175077302876	1021.4204625273752	2	511.7177429199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QGDFLPGCEG_	nc|ENSG00000102796|A0PJE2-2|DHRS12	40.77816245573522	0.5419747034533848	2				NaN	NaN	0	NaN	2171	2602	4769
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4776	17.122	NaN	13241	30	0	2020	0.143	+			26381	LTDPRCWYF	9	75	600.7787649815866	1199.5429770299731	2	600.7783813476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LTDPRCWYF_	NYAP2|p.K316Rfs*57|1|0.27|ENSG00000144460|chr2:225582356-225582356|C/-|frameshift_variant	39.252832667884924	0.4290233611298554	2				NaN	NaN	0	NaN	2172	2602	4769
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4787	17.149	NaN	23245	30	0	1495.2	0.214	+			31527	QLKCIMEVV	9	93	531.78826977356	1061.56198661392	2	531.7871704101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QLKCIMEVV_	MAPK11|p.R234C|1|0.25|ENSG00000185386|chr22:50266288-50266288|G/A|missense_variant	56.72105179125745	0.24094814563026265	2				NaN	NaN	0	NaN	2180	2605	4786
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4788	17.153	NaN	26636	30	0	14254	0.106	+			39549	STFVGTFLV	9	65	324.1795722158936	969.5168872478807	3	324.1798095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STFVGTFLV_	GPR26|p.I247V|1|0.31|ENSG00000154478|chr10:123674888-123674888|A/G|missense_variant	26.79610172149135	0.5528238334041078	2				NaN	NaN	0	NaN	2181	2605	4786
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4789	17.155	NaN	10679	30	0	2362.8	0.106				-1	 	0	58	455.1884547498524	908.3623565665048	2	455.188232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2182	2605	4786
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4790	17.157	NaN	15242	30	0	4853.6	0.106			+	44655	TTGAVSGSFVR	11	68	361.19256114198157	1080.5558540261447	3	361.1927795410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TTGAVSGSFVR_	REV__ENST00000478000.5_1_7:944755-944842:-|nuORF	50.79123845855914	0.4102859592092987	2				NaN	NaN	0	NaN	2183	2605	4786
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4791	17.159	NaN	8000.1	30	0	1081	0.106	+			6063	AVMPPGRSR	9	67	485.76539821765044	969.5162435021009	2	485.76605224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVMPPGRSR_	ENSG00000131037|ENST00000201647|EPS8L1;EPS8L1|p.D510Efs*3|1|0.38|ENSG00000131037|chr19:55086071-55086072|AC/-|frameshift_variant;EPS8L1|p.G206Afs*54|1|0.23|ENSG00000131037|chr19:55081330-55081336|GCGGGGC/-|frameshift_variant;nc|ENSG00000131037|Q8TE68-3|EPS8L1	82.24051045832904	0.08786059719216216	2				NaN	NaN	0	NaN	2184	2605	4786
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4792	17.16	NaN	10145	30	0	983.65	0.106			+	23181	KWNDLCGYN	9	73	556.7464873361249	1111.4784217390497	2	556.7473754882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KWNDLCGYN_	REV__ENSG00000171307|ENST00000393760|ZDHHC16;REV__ENST00000459777.5_1_10:99206080-99216645:+|nuORF;REV__ENST00000466895.5_1_10:99206080-99216645:+|nuORF;REV__ENST00000487315.1_1_10:99213348-99216645:+|nuORF;REV__ENST00000495735.5_1_10:99212613-99216645:+|nuORF;REV__nc|ENSG00000171307|Q969W1-2|ZDHHC16;REV__nc|ENSG00000171307|Q969W1-3|ZDHHC16;REV__nc|ENSG00000171307|Q969W1-4|ZDHHC16	49.536043120802724	0.308405419312776	2				NaN	NaN	0	NaN	2185	2605	4786
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4793	17.162	NaN	4510.9	30	0	828.43	0.035	+			37579	SLNKQIAQK	9	66	515.306427025732	NaN	0	515.3065185546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SLNKQIAQK_	ENSG00000125633|ENST00000376300|CCDC93;ENST00000460781.1_1_2:118709253-118753033:-|nuORF	67.49366992349736	0.1173583512313808	2				NaN	NaN	0	NaN	2186	2605	4786
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4806	17.19	NaN	17862	30	0	9178.4	0.214	+			15065	GTPESVQSAK	10	65	502.2563124731361	1002.4980720130723	2	502.2562561035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTPESVQSAK_	ENSG00000162613|ENST00000370768|FUBP1;FUBP1|p.I301Yfs*22|2|0.26|ENSG00000162613|chr1:77964293-77964293|T/-|frameshift_variant;nc|ENSG00000162613|Q96AE4-2|FUBP1	65.2775769800794	0.31784129392001936	2				NaN	NaN	0	NaN	2196	2608	4805
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4807	17.194	NaN	12366	30	0	1672.1	0.106	+			21986	KSFAKSRQI	9	72	532.8143943352893	1063.6142357373785	2	532.8145141601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KSFAKSRQI_	C8B|p.M53I|1|0.1|ENSG00000021852|chr1:56960110-56960110|C/T|missense_variant	40.77816245573522	0.41113185337114944	2				NaN	NaN	0	NaN	2197	2608	4805
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4808	17.196	NaN	7142.1	30	0	1016.7	0.106	+			42483	TANDANTKY	9	76	499.23317349853	996.45179406386	2	499.23309326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TANDANTKY_	ENSG00000149182|ENST00000524782|ARFGAP2;ENST00000395449.7_1_11:47187835-47198404:-|nuORF;ENST00000524727.5_1_11:47194869-47198404:-|nuORF;ENST00000527097.5_1_11:47193699-47198404:-|nuORF;nc|ENSG00000149182|Q8N6H7-2|ARFGAP2	56.632244143249146	0.24168844994051353	2				NaN	NaN	0	NaN	2198	2608	4805
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4809	17.198	NaN	5483.3	30	0	957.42	0.106				-1	 	0	52	377.2155596854164	1128.6248496564492	3	377.2156982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2199	2608	4805
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4810	17.199	NaN	8229.2	30	0	1598.1	0.106			+	8655	EDQHKIQIA	9	73	541.2859828961625	1080.557412859125	2	541.2860107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EDQHKIQIA_	REV__ENSG00000101596|ENST00000320876|SMCHD1;REV__ENST00000584897.5_1_18:2726458-2784452:+|nuORF;REV__nc|ENSG00000101596|A6NHR9-2|SMCHD1	53.08895987439943	0.27122541748218487	2				NaN	NaN	0	NaN	2200	2608	4805
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4811	17.201	NaN	6058.4	30	0	857.98	0.106				-1	GEMLCNMLRWR	11	74	749.340730426813	1496.666907920426	2	749.3377685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),2 Oxidation (M)	_GEM(Oxidation (M))LC(Carbamidomethyl (C))NM(Oxidation (M))LRWR_	ENST00000375571.5_1_20:31436776-31436899:+|nuORF	19.1035232394073	0.7810393085260824	2				NaN	NaN	0	NaN	2201	2608	4805
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4812	17.203	NaN	2118.2	30	0	437.85	0.032				-1	 	0	39	397.6752708982623	793.3359888633246	2	397.67498779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2202	2608	4805
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4823	17.228	NaN	26532	30	0	3807	0.214	+			5087	ATSNVHMVK	9	83	493.7581689587892	985.5017849843784	2	493.7580871582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSNVHMVK_	ENSG00000197256|ENST00000586659|KANK2;ENST00000590400.1_1_19:11303345-11305238:-|nuORF;KANK2|p.P430Rfs*5|1|0.23|ENSG00000197256|chr19:11178681-11178681|G/-|frameshift_variant;nc|ENSG00000197256|Q63ZY3-2|KANK2;nc|ENSG00000197256|Q63ZY3-3|KANK2	117.81106730687013	0.02252488733980868	2				NaN	NaN	0	NaN	2210	2611	4822
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4824	17.232	NaN	24572	30	0	5855	0.106	+			27844	MTAEEMKATE	10	80	570.7498527186217	1139.4851525040433	2	570.7498779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MTAEEMKATE_	ENSG00000004478|ENST00000001008|FKBP4	40.05817265558897	0.5486090488315611	2				NaN	NaN	0	NaN	2211	2611	4822
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4825	17.234	NaN	10645	30	0	2236.6	0.106	+			14358	GTACGKYYR	9	74	538.2530181714018	1074.4914834096035	2	538.2535400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_GTAC(Carbamidomethyl (C))GKYYR_	ENSG00000156482|ENST00000287038|RPL30;ENST00000480085.1_1_6:114160699-114160804:+|nuORF	118.74307786436346	0.02196067127630568	2				NaN	NaN	0	NaN	2212	2611	4822
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4826	17.236	NaN	10180	30	0	2019.4	0.106	+			5018	ATSDKMQHFK	10	73	596.7928636875015	NaN	0	596.7930297851562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATSDKMQHFK_	ENSG00000122482|ENST00000337393|ZNF644;nc|ENSG00000122482|Q9H582-2|ZNF644;ZNF644|p.K1068Lfs*15|1|0.05|ENSG00000122482|chr1:90937971-90937972|-/GTAG|frameshift_variant	88.17693792209575	0.06076230397739847	2				NaN	NaN	0	NaN	2213	2611	4822
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4827	17.237	NaN	26810	30	0	6173.2	0.106	+			13730	GQATFQQSK	9	92	497.7511415221402	993.4877301110804	2	497.7501220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GQATFQQSK_	ENST00000429772.6_1_12:48357429-48359073:+|nuORF	133.9934435666947	0.013297982075521412	2				NaN	NaN	0	NaN	2214	2611	4822
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4828	17.239	NaN	10780	30	0	2544.8	0.106	+			42172	SYTSGPGSR	9	65	456.214606234397	910.4146595355941	2	456.2143859863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SYTSGPGSR_	CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000550170.5_1_12:53294858-53298765:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	63.53385203322761	0.18415635464017938	2				NaN	NaN	0	NaN	2215	2611	4822
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4829	17.241	NaN	8644.3	30	0	1328	0.036				-1	TFAVPSCCW	9	73	535.7235257052682	1069.4324984773364	2	535.7236938476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_TFAVPSC(Carbamidomethyl (C))CW_	ENST00000517494.1_2_8:19363479-19615372:-|nuORF	47.91560031466742	0.327412564698279	2				NaN	NaN	0	NaN	2216	2611	4822
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4840	17.267	NaN	28610	30	0	10255	0.214	+			38407	SSAELSTS	8	65	391.1822581509486	780.3499633686972	2	391.1823425292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSAELSTS_	ENSG00000184304|ENST00000331968|PRKD1;ENST00000468370.5_1_14:30107689-30135322:-|nuORF;PRKD1|p.N701Kfs*6|1|0.26|ENSG00000184304|chr14:29599090-29599091|-/T|frameshift_variant;PRKD1|p.S448Vfs*28|1|0.08|ENSG00000184304|chr14:29632913-29632919|ATTTGCT/-|frameshift_variant	25.450171626174864	0.7628259754767981	2				NaN	NaN	0	NaN	2224	2614	4839
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4841	17.271	NaN	17327	30	0	4140.8	0.106	+			35154	SAIDKMTKK	9	71	511.2891409394838	NaN	0	511.2893371582031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAIDKMTKK_	CTNNA1|p.K493Nfs*31|1|0.19|ENSG00000044115|chr5:138917827-138917827|A/-|frameshift_variant;CTNNA1|p.T832*|1|0.29|ENSG00000044115|chr5:138933859-138933862|CAGA/-|frameshift_variant;ENSG00000044115|ENST00000302763|CTNNA1;ENST00000515849.2_1_5:114726864-114727050:-|nuORF;ENST00000517534.5_1_5:138163374-138223382:+|nuORF;nc|ENSG00000044115|P35221-2|CTNNA1	117.81106730687013	0.0026430897281881707	2				NaN	NaN	0	NaN	2225	2614	4839
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4842	17.273	NaN	24965	30	0	7971.1	0.106	+			22771	KVFDAKPSAK	10	76	364.2131882014021	1089.6177352044062	3	364.21337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KVFDAKPSAK_	ENSG00000143889|ENST00000449105|HNRNPLL;nc|ENSG00000143889|Q8WVV9-4|HNRNPLL;nc|ENSG00000143889|Q8WVV9-5|HNRNPLL	86.88156770896713	0.14892753630261096	2				NaN	NaN	0	NaN	2226	2614	4839
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4843	17.275	NaN	12685	30	0	2799.9	0.106			+	9206	EGRSHPRSK	9	78	527.2820748718581	1052.549596810516	2	527.2825317382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EGRSHPRSK_	REV__ENSG00000175470|ENST00000455566|PPP2R2D	56.43379154798735	0.2433427591689151	2				NaN	NaN	0	NaN	2227	2614	4839
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4844	17.276	NaN	12861	30	0	1135.4	0.106			+	21701	KQHCYQVAS	9	89	532.2532551930901	1062.4919574529802	2	532.253662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KQHCYQVAS_	REV__ENSG00000072518|ENST00000402010|MARK2;REV__ENSG00000075413|ENST00000429436|MARK3;REV__ENSG00000116141|ENST00000366917|MARK1;REV__ENST00000558223.5_1_14:103852366-103932133:+|nuORF;REV__MARK1|p.H180Qfs*3|1|0.18|ENSG00000116141|chr1:220615981-220615982|-/A|frameshift_variant;REV__MARK2|p.K225Nfs*12|1|0.39|ENSG00000072518|chr11:63900012-63900012|A/-|frameshift_variant;REV__MARK2|p.Q563Sfs*53|1|0.41|ENSG00000072518|chr11:63904791-63904791|C/-|frameshift_variant;REV__MARK2|p.T549Rfs*67|2|0.4|ENSG00000072518|chr11:63904110-63904110|C/-|frameshift_variant;REV__MARK3|p.A425Sfs*19|1|0.22|ENSG00000075413|chr14:103474997-103474998|-/C|frameshift_variant;REV__nc|ENSG00000072518|Q7KZI7-10|MARK2;REV__nc|ENSG00000072518|Q7KZI7-11|MARK2;REV__nc|ENSG00000072518|Q7KZI7-12|MARK2;REV__nc|ENSG00000072518|Q7KZI7-13|MARK2;REV__nc|ENSG00000072518|Q7KZI7-14|MARK2;REV__nc|ENSG00000072518|Q7KZI7-15|MARK2;REV__nc|ENSG00000072518|Q7KZI7-16|MARK2;REV__nc|ENSG00000072518|Q7KZI7-2|MARK2;REV__nc|ENSG00000072518|Q7KZI7-3|MARK2;REV__nc|ENSG00000072518|Q7KZI7-4|MARK2;REV__nc|ENSG00000072518|Q7KZI7-5|MARK2;REV__nc|ENSG00000072518|Q7KZI7-6|MARK2;REV__nc|ENSG00000072518|Q7KZI7-7|MARK2;REV__nc|ENSG00000072518|Q7KZI7-8|MARK2;REV__nc|ENSG00000072518|Q7KZI7-9|MARK2;REV__nc|ENSG00000075413|P27448-2|MARK3;REV__nc|ENSG00000075413|P27448-3|MARK3;REV__nc|ENSG00000075413|P27448-4|MARK3;REV__nc|ENSG00000075413|P27448-6|MARK3;REV__nc|ENSG00000075413|P27448-7|MARK3;REV__nc|ENSG00000075413|P27448-8|MARK3;REV__nc|ENSG00000116141|Q9P0L2-2|MARK1;REV__nc|ENSG00000116141|Q9P0L2-3|MARK1	87.75429964447693	0.0711966946989736	2				NaN	NaN	0	NaN	2228	2614	4839
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4845	17.278	NaN	8095.9	30	0	1282.5	0.106	+			44456	TSNPVTTTK	9	72	474.7535363734868	947.4925198137736	2	474.7532043457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TSNPVTTTK_	COL6A3|p.A2956Lfs*45|1|0.33|ENSG00000163359|chr2:237336234-237336234|C/-|frameshift_variant;COL6A3|p.A2957Lfs*44|1|0.33|ENSG00000163359|chr2:237336232-237336232|A/-|frameshift_variant;COL6A3|p.G3016Vfs*19|1|0.34|ENSG00000163359|chr2:237334810-237334810|G/-|frameshift_variant;ENSG00000163359|ENST00000295550|COL6A3;ENST00000491769.1_1_2:238233419-238250825:-|nuORF;nc|ENSG00000163359|P12111-2|COL6A3;nc|ENSG00000163359|P12111-4|COL6A3	89.02883481214508	0.06760336634167786	2				NaN	NaN	0	NaN	2229	2614	4839
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4846	17.28	NaN	9578.3	30	0	3555.7	0.035			+	37575	SLNHQVALI	9	68	332.19401739892453	993.5602227969737	3	332.1942443847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SLNHQVALI_	REV__ANKRD18A|p.K865Rfs*16|1|0.35|ENSG00000180071|chr9:38577200-38577200|T/-|frameshift_variant;REV__ANKRD18B|p.H419Tfs*9|1|0.29|ENSG00000230453|chr9:33548223-33548224|-/A|frameshift_variant;REV__ENSG00000180071|ENST00000399703|ANKRD18A;REV__ENSG00000230453|ENST00000684830|ANKRD18B;REV__ENST00000474881.6_1_9:33533454-33539514:+|nuORF;REV__nc|ENSG00000230453|A2A2Z9|ANKRD18B	31.954861631926434	0.5046124803899898	2				NaN	NaN	0	NaN	2230	2614	4839
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4859	17.308	NaN	34035	30	0	5239.2	0.214	+			9990	ERKSSSTAP	9	76	481.7484266875816	961.4823004419633	2	481.7483825683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ERKSSSTAP_	ENSG00000100207|ENST00000677622|TCF20;nc|ENSG00000100207|Q9UGU0-2|TCF20;TCF20|p.G1028Efs*6|1|0.09|ENSG00000100207|chr22:42212223-42212223|C/-|frameshift_variant;TCF20|p.K1579Nfs*36|1|0.18|ENSG00000100207|chr22:42210569-42210569|T/-|frameshift_variant;TCF20|p.L1388Efs*6|1|0.17|ENSG00000100207|chr22:42211143-42211144|AA/-|frameshift_variant;TCF20|p.L1424Gfs*21|1|0.32|ENSG00000100207|chr22:42211037-42211038|-/TCCT|frameshift_variant;TCF20|p.P1561Lfs*54|1|0.31|ENSG00000100207|chr22:42210624-42210624|G/-|frameshift_variant;TCF20|p.Y1725Ifs*157|1|0.43|ENSG00000100207|chr22:42210133-42210133|A/-|frameshift_variant	79.71258880314673	0.09879134589249085	2				NaN	NaN	0	NaN	2240	2617	4858
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4860	17.311	NaN	27954	30	0	5049.8	0.106			+	-1	KESVGCCFS	9	86	508.7135660636129	1015.4125791940259	2	508.7138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_KESVGC(Carbamidomethyl (C))CFS_	REV__MARK3|p.A425Sfs*19|1|0.22|ENSG00000075413|chr14:103474997-103474998|-/C|frameshift_variant	66.42927471994793	0.16001998865088202	2				NaN	NaN	0	NaN	2241	2617	4858
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4861	17.314	NaN	9211.8	30	0	1490.4	0.106			+	-1	CPSCRHAG	8	62	472.69524886475125	943.3759447963025	2	472.6947937011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))PSC(Carbamidomethyl (C))RHAG_	REV__ENSG00000150048|ENST00000315330|CLEC1A	24.20275056022122	0.7724576178584145	2				NaN	NaN	0	NaN	2242	2617	4858
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4862	17.315	NaN	11283	30	0	1764.3	0.106			+	541	ADDGHDVVQ	9	74	478.20918459468464	954.4038162561693	2	478.2090759277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ADDGHDVVQ_	REV__ENST00000505325.1_1_5:60642967-60643258:+|nuORF	68.78682469695295	0.14603441672067394	2				NaN	NaN	0	NaN	2243	2617	4858
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4863	17.317	NaN	11377	30	0	1745.5	0.106	+			40797	SVDSFKNQK	9	77	526.7723974235843	NaN	0	526.7722778320312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVDSFKNQK_	ENSG00000099290|ENST00000282633|WASHC2A;nc|ENSG00000099290|Q641Q2-2|WASHC2A	101.25262130126117	0.018912469721856617	2				NaN	NaN	0	NaN	2244	2617	4858
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4864	17.319	NaN	11357	30	0	1922.4	0.106			+	33150	RESRGVPALG	10	75	521.292758241526	1040.570963549852	2	521.2938232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RESRGVPALG_	REV__ENST00000369234.4_1_10:118030569-118032518:-|nuORF;REV__ENST00000439649.7_1_10:118030569-118032684:-|nuORF	55.08391021199286	0.41055145962533396	2				NaN	NaN	0	NaN	2245	2617	4858
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4865	17.321	NaN	11139	30	0	1148.6	0.035	+			1339	AETNLRHTC	9	75	522.7470651122676	1043.479577291335	2	522.7478637695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AETNLRHTC_	ENSG00000135821|ENST00000331872|GLUL;ENST00000475808.5_1_1:182355349-182357923:-|nuORF;ENST00000489818.5_1_1:182354893-182357872:-|nuORF	44.377184641726394	0.36891676396732553	2				NaN	NaN	0	NaN	2246	2617	4858
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4879	17.351	NaN	36275	30	0	3523.4	0.214	+			42448	TAMAAAKAPTK	11	98	530.7936192788478	1059.5726856244955	2	530.7949829101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAMAAAKAPTK_	ENSG00000114391|ENST00000394077|RPL24	140.45367241318817	0.0004726318996197869	2				NaN	NaN	0	NaN	2257	2620	4878
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4880	17.354	NaN	16341	30	0	2166.3	0.106	+			39428	STDVSHCVK	9	82	488.2321720899601	974.4497912467202	2	488.23175048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STDVSHCVK_	ENSG00000166750|ENST00000299977|SLFN5;nc|ENSG00000166750|Q08AF3-2|SLFN5;SLFN5|p.P698Lfs*21|1|0.46|ENSG00000166750|chr17:35265300-35265300|C/-|frameshift_variant;SLFN5|p.Q524Sfs*11|1|0.73|ENSG00000166750|chr17:35264609-35264609|C/-|frameshift_variant	157.32903759742106	0.0051608477690748295	2				NaN	NaN	0	NaN	2258	2620	4878
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4881	17.356	NaN	21566	30	0	9630.9	0.106	+			42449	TAMAAAKAPTK	11	82	354.198401308642	1059.5733745261261	3	354.1988830566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TAMAAAKAPTK_	ENSG00000114391|ENST00000394077|RPL24	80.870553263523	0.1451153566872633	2				NaN	NaN	0	NaN	2259	2620	4878
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4882	17.358	NaN	27266	30	0	7032.6	0.106			+	-1	TQMHLTKH	8	70	506.2554897931859	1010.4964266531719	2	506.2557067871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_TQM(Oxidation (M))HLTKH_	REV__nc|ENSG00000164920|Q8N2R0-2|OSR2	58.78195531508484	0.5138399468736706	2				NaN	NaN	0	NaN	2260	2620	4878
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4883	17.36	NaN	13188	30	0	2427	0.106	+			49244	VVNPKYEGK	9	84	345.19389044062234	1032.559841922067	3	345.1940002441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVNPKYEGK_	ENSG00000150093|ENST00000302278|ITGB1	39.252832667884924	0.4290233611298554	2				NaN	NaN	0	NaN	2261	2620	4878
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4884	17.362	NaN	4680.5	30	0	1872.2	0.037			+	26864	LWAIMIKLV	9	50	362.89604388460725	1085.6663022540217	3	362.8963928222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LWAIMIKLV_	REV__ENST00000371221.3_1_10:97392751-97393321:-|nuORF	20.481830146152948	0.6112419832031293	2				NaN	NaN	0	NaN	2262	2620	4878
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4885	17.362	NaN	106320	30	0	18253	0.139	+			41427	SVNGKVLSK	9	96	466.28211094869437	930.5496689641888	2	466.2821044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVNGKVLSK_	ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2;NOMO1|p.P1102Hfs*42|1|0.36|ENSG00000103512|chr16:14886838-14886838|C/-|frameshift_variant;NOMO1|p.P141Sfs*12|1|0.33|ENSG00000103512|chr16:14846592-14846593|-/AG|frameshift_variant	136.5150327860613	0.012115003498012726	2				NaN	NaN	0	NaN	2263	2620	4878
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4902	17.398	NaN	61046	30	0	6486.1	0.188	+			35008	SACHKYFEK	9	89	585.2738848239165	1168.533216714633	2	585.2742309570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SAC(Carbamidomethyl (C))HKYFEK_	ENSG00000163993|ENST00000296370|S100P;ENST00000513778.1_1_4:6695618-6698766:+|nuORF;S100P|p.T82M|1|0.3|ENSG00000163993|chr4:6696999-6696999|C/T|missense_variant	93.5975768576971	0.05472259948179787	2				NaN	NaN	0	NaN	2277	2623	4901
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4903	17.401	NaN	68042	30	0	26039	0.106			+	32110	QSIHLRMA	8	77	478.26110366564905	954.5076543980981	2	478.2611389160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QSIHLRMA_	REV__ENSG00000204843|ENST00000628224|DCTN1;REV__nc|ENSG00000204843|Q14203-2|DCTN1;REV__nc|ENSG00000204843|Q14203-3|DCTN1;REV__nc|ENSG00000204843|Q14203-4|DCTN1;REV__nc|ENSG00000204843|Q14203-5|DCTN1;REV__nc|ENSG00000204843|Q14203-6|DCTN1	37.15910966729921	0.6739408393984688	2				NaN	NaN	0	NaN	2278	2623	4901
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4904	17.403	NaN	68618	30	0	11503	0.106			+	40832	SVEKSRLQ	8	112	473.7692013483207	945.5238497634414	2	473.76922607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVEKSRLQ_	REV__ENSG00000137877|ENST00000320955|SPTBN5;REV__SPTBN5|p.A3297Gfs*48|1|0.56|ENSG00000137877|chr15:41853672-41853673|-/C|frameshift_variant;REV__SPTBN5|p.G2751Afs*60|1|0.08|ENSG00000137877|chr15:41857685-41857685|C/-|frameshift_variant	75.04331003522576	0.3648751570195447	2				NaN	NaN	0	NaN	2279	2623	4901
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4905	17.405	NaN	23435	30	0	3485.9	0.106	+			40772	SVDLPKHAK	9	78	497.7876204697921	993.5606880063842	2	497.787353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVDLPKHAK_	ENSG00000095203|ENST00000374566|EPB41L4B;nc|ENSG00000095203|Q9H329-2|EPB41L4B	118.74307786436346	0.02196067127630568	2				NaN	NaN	0	NaN	2280	2623	4901
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4906	17.406	NaN	30388	30	0	7906.1	0.106			+	9991	ERKTNQSL	8	87	488.26366929920084	974.5127856652017	2	488.263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ERKTNQSL_	REV__CCT3|p.A379Lfs*9|1|0.21|ENSG00000163468|chr1:156312061-156312061|C/-|frameshift_variant;REV__CCT3|p.K197Nfs*23|1|0.17|ENSG00000163468|chr1:156320857-156320857|T/-|frameshift_variant;REV__CCT3|p.L350Ffs*9|1|0.49|ENSG00000163468|chr1:156312146-156312147|-/A|frameshift_variant;REV__ENSG00000163468|ENST00000295688|CCT3;REV__ENST00000368256.3_1_1:156302875-156308050:-|nuORF;REV__ENST00000489870.1_1_1:156305554-156307990:-|nuORF;REV__nc|ENSG00000163468|P49368-2|CCT3	53.351449002276354	0.5676011784961348	2				NaN	NaN	0	NaN	2281	2623	4901
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4907	17.408	NaN	17562	30	0	8083.3	0.106	+			12661	GEISSLYLC	9	66	492.73798931518604	NaN	0	492.7381286621094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GEISSLYLC_	ENSG00000198870|ENST00000371957|STKLD1;nc|ENSG00000198870|Q8NE28-3|STKLD1	38.80614096846853	0.28164298475537564	2				NaN	NaN	0	NaN	2282	2623	4901
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4908	17.41	NaN	15800	30	0	3035.4	0.035				-1	EKMDCVQQ	8	62	519.2245001697418	1036.4344474062834	2	519.2245483398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_EKMDC(Carbamidomethyl (C))VQQ_	ENSG00000143379|ENST00000692827|SETDB1;ENST00000463774.1_1_1:150900190-150900451:+|nuORF;ENST00000487584.6_1_1:150898772-150913809:+|nuORF;nc|ENSG00000143379|Q15047-2|SETDB1;nc|ENSG00000143379|Q15047-3|SETDB1;nc|ENSG00000143379|Q15047|SETDB1;SETDB1|p.D147Tfs*11|1|0.26|ENSG00000143379|chr1:150939962-150939962|A/-|frameshift_variant	39.252832667884924	0.6609488554722044	2				NaN	NaN	0	NaN	2283	2623	4901
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4914	17.425	NaN	25207	30	0	7447.6	0.214	+			30820	QEEKLKAK	8	98	487.2876627890296	972.5607726448592	2	487.2872009277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QEEKLKAK_	ENSG00000142621|ENST00000688493|FHAD1;ENST00000471347.5_1_1:15654853-15671627:+|nuORF	74.25504064058377	0.37144338840759816	2				NaN	NaN	0	NaN	2286	2626	4913
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4915	17.429	NaN	17470	30	0	2523.5	0.106	+			44746	TTMKVHIKR	9	81	557.3316363202699	1112.6487197073398	2	557.33203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTMKVHIKR_	ENSG00000169894|ENST00000379458|MUC3A;nc|ENSG00000169894|Q02505-5|MUC3A	85.16082228582465	0.07850854922700509	2				NaN	NaN	0	NaN	2287	2626	4913
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4916	17.431	NaN	8931.5	30	0	1426.4	0.106			+	9379	EKDTEGHSK	9	60	515.7454664527285	1029.4763799722568	2	515.2431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EKDTEGHSK_	REV__ENSG00000216937|ENST00000639629|CCDC7	51.19269402634007	0.2889735674168909	2				NaN	NaN	0	NaN	2288	2626	4913
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4917	17.432	NaN	9499.1	30	0	1382.3	0.106	+			12845	GENYLPVHL	9	69	521.270370417453	1040.526187901706	2	521.791259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GENYLPVHL_	ENSG00000122180|ENST00000241651|MYOG	37.15910966729921	0.4535818937225704	2				NaN	NaN	0	NaN	2289	2626	4913
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4918	17.434	NaN	10645	30	0	2136.8	0.106			+	44006	TPIGTSASPLQ	11	63	536.2875309216882	1070.5605089101764	2	536.8095092773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TPIGTSASPLQ_	REV__ENSG00000060237|ENST00000315939|WNK1;REV__nc|ENSG00000060237|Q9H4A3-2|WNK1;REV__nc|ENSG00000060237|Q9H4A3-4|WNK1;REV__nc|ENSG00000060237|Q9H4A3-5|WNK1;REV__nc|ENSG00000060237|Q9H4A3-6|WNK1;REV__nc|ENSG00000060237|Q9H4A3-7|WNK1	30.317721548370564	0.6717830234747728	2				NaN	NaN	0	NaN	2290	2626	4913
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4919	17.436	NaN	8548.1	30	0	2044.7	0.106			+	22049	KSIVKFDGK	9	68	511.3061176325803	1020.5976823319606	2	511.3056945800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KSIVKFDGK_	REV__tr|U7SGM1|U7SGM1_FUSNUHTHlysR-typedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02239PE=3SV=1	35.15202426646627	0.4747332964206883	2				NaN	NaN	0	NaN	2291	2626	4913
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4920	17.438	NaN	8027.4	30	0	1389.1	0.035			+	21975	KSEKLFKQ	8	66	504.2979331558496	1006.5813133784992	2	504.2980651855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KSEKLFKQ_	REV__tr|U7T0W5|U7T0W5_FUSNUDUF4132domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00703PE=4SV=1	45.97224482568171	0.6192535143389125	2				NaN	NaN	0	NaN	2292	2626	4913
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4933	17.466	NaN	50517	30	0	6503.3	0.214	+			3644	ASYENVRAK	9	92	519.2727194121604	1036.5308858911208	2	519.2724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASYENVRAK_	ENSG00000128340|ENST00000249071|RAC2	139.38205640894643	0.01076996779551382	2				NaN	NaN	0	NaN	2302	2629	4932
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4934	17.469	NaN	15172	30	0	3595.6	0.106			+	10040	ESCEYSKA	8	69	458.6896249484574	915.3646969637148	2	458.6892395019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ESCEYSKA_	REV__ENSG00000198556|ENST00000331410|ZNF789;REV__nc|ENSG00000198556|Q5FWF6-2|ZNF789	30.503639358989545	0.7238069182250283	2				NaN	NaN	0	NaN	2303	2629	4932
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4935	17.471	NaN	23106	30	0	2365.8	0.106	+			5945	AVLKHIENK	9	79	526.3169409413578	1050.6193289495154	2	526.3169555664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVLKHIENK_	ENSG00000160695|ENST00000621676|VPS11;nc|ENSG00000160695|Q9H270|VPS11	145.46060221211434	0.007927189773590037	2				NaN	NaN	0	NaN	2304	2629	4932
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4936	17.473	NaN	14469	30	0	4490.2	0.106	+			5946	AVLKHIENK	9	68	351.213373658199	1050.618291574797	3	351.2133483886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVLKHIENK_	ENSG00000160695|ENST00000621676|VPS11;nc|ENSG00000160695|Q9H270|VPS11	85.86182877749512	0.07653218437724067	2				NaN	NaN	0	NaN	2305	2629	4932
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4937	17.475	NaN	12941	30	0	2152.7	0.106			+	22355	KTGTLIEKR	9	69	523.3222386940803	1044.6299244549605	2	523.3219604492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KTGTLIEKR_	REV__ENSG00000196169|ENST00000389916|KIF19	104.01359247289065	0.03510646158778409	2				NaN	NaN	0	NaN	2306	2629	4932
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4938	17.477	NaN	13212	30	0	1904.3	0.106	+			12283	GAYDGKYEK	9	76	515.7454664527285	1029.4763799722568	2	515.7454833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GAYDGKYEK_	ENSG00000196981|ENST00000330689|WDR5B;WDR5B|p.P136Efs*12|1|0.03|ENSG00000196981|chr3:122415124-122415125|-/CTCT|frameshift_variant	104.01359247289065	0.03510646158778409	2				NaN	NaN	0	NaN	2307	2629	4932
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4939	17.479	NaN	7631.3	30	0	2054.5	0.034			+	31430	QKPDRLDT	8	70	486.7590882011889	971.5036234691778	2	486.7589416503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QKPDRLDT_	REV__ENST00000428388.6_1_6:32121760-32122096:+|nuORF	40.77816245573522	0.6514838689002179	2				NaN	NaN	0	NaN	2308	2629	4932
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4951	17.504	NaN	31855	30	0	5326.4	0.214	+			2699	AQQKFKINK	9	88	368.8889036257825	1103.6448814775476	3	368.88909912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AQQKFKINK_	ENSG00000128708|ENST00000264108|HAT1;ENST00000457761.6_1_2:172821936-172844354:+|nuORF;nc|ENSG00000128708|O14929-2|HAT1	79.71258880314673	0.09879134589249085	2				NaN	NaN	0	NaN	2317	2632	4950
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4952	17.508	NaN	22075	30	0	3723.5	0.106	+			12118	GAFNGTVKK	9	88	461.26149459948664	920.5084362657733	2	461.2613525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GAFNGTVKK_	ENSG00000148606|ENST00000372371|POLR3A;POLR3A|p.K348Nfs*33|1|0.16|ENSG00000148606|chr10:78021864-78021864|T/-|frameshift_variant	124.08010499294276	0.018729767491916592	2				NaN	NaN	0	NaN	2318	2632	4950
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4953	17.51	NaN	31472	30	0	3328.4	0.106	+			2849	ASALGSSSYKK	11	94	549.7936894309892	1097.5728259287782	2	549.7940063476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASALGSSSYKK_	ENSG00000122965|ENST00000261741|RBM19;RBM19|p.F841Sfs*18|1|0.28|ENSG00000122965|chr12:113915007-113915007|G/-|frameshift_variant	77.53327743719008	0.17293716712445248	2				NaN	NaN	0	NaN	2319	2632	4950
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4954	17.512	NaN	12973	30	0	5961.4	0.106			+	49473	VVYLYVTN	8	56	324.1795722158936	969.5168872478807	3	324.17999267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVYLYVTN_	REV__ENSG00000105852|ENST00000265627|PON3;REV__ENST00000442770.5_1_7:94989287-95024046:-|nuORF;REV__ENST00000482624.5_1_7:94993173-95025662:-|nuORF	21.70233525837049	0.7917639344264583	2				NaN	NaN	0	NaN	2320	2632	4950
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4955	17.513	NaN	12020	30	0	3308.2	0.106	+			20602	KGANRVLFAL	10	73	544.8328013242966	1087.6510497153931	2	544.833251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KGANRVLFAL_	ENST00000360089.8_1_1:158065157-158065664:+|nuORF	47.95952297671804	0.47580206326914537	2				NaN	NaN	0	NaN	2321	2632	4950
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4956	17.515	NaN	17953	30	0	3223.3	0.106			+	44360	TSIQSVMAK	9	79	482.7600100181064	963.5054671030128	2	482.76025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TSIQSVMAK_	REV__ENSG00000157741|ENST00000473989|UBN2;REV__UBN2|p.G1191Efs*28|1|0.17|ENSG00000157741|chr7:139284473-139284473|G/-|frameshift_variant	63.53385203322761	0.18415635464017938	2				NaN	NaN	0	NaN	2322	2632	4950
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4957	17.517	NaN	3100.6	30	0	1196.6	0.036			+	26373	LTDFDTYR	8	52	344.1661188050808	1029.4765270154426	3	344.1662292480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LTDFDTYR_	REV__ENSG00000177990|ENST00000324472|DPY19L2;REV__nc|ENSG00000291139|Q6ZN68-2|DPY19L2P2;REV__nc|ENSG00000291139|Q6ZN68-3|DPY19L2P2;REV__nc|ENSG00000291139|Q6ZN68|DPY19L2P2	26.79610172149135	0.7524337208463756	2				NaN	NaN	0	NaN	2323	2632	4950
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4970	17.545	NaN	81535	30	0	13684	0.214			+	20249	KEMDLASVN	9	109	511.74534647769235	1021.4761400221847	2	511.745361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_KEM(Oxidation (M))DLASVN_	REV__ENSG00000100941|ENST00000216832|PNN	113.41158876095287	0.025516849225023126	2				NaN	NaN	0	NaN	2333	2635	4969
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4971	17.549	NaN	44277	30	0	10532	0.106	+			36394	SETKNANSL	9	84	482.24070247457047	962.466852015941	2	482.2405090332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SETKNANSL_	ENSG00000137673|ENST00000260227|MMP7;ENST00000531200.1_1_11:102398162-102401431:-|nuORF;ENST00000533366.5_1_11:102395628-102401431:-|nuORF	85.86182877749512	0.07653218437724067	2				NaN	NaN	0	NaN	2334	2635	4969
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4972	17.551	NaN	26916	30	0	2712.6	0.106	+			45245	TVQEKTFNK	9	95	547.7957437279739	1093.5769345227477	2	547.7958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVQEKTFNK_	ENSG00000163104|ENST00000354268|SMARCAD1;nc|ENSG00000163104|Q9H4L7-2|SMARCAD1;SMARCAD1|p.K230Rfs*28|1|0.26|ENSG00000163104|chr4:94240985-94240985|A/-|frameshift_variant;SMARCAD1|p.K734Qfs*6|1|0.31|ENSG00000163104|chr4:94278630-94278631|-/C|frameshift_variant	164.45504665044191	0.003713414289755139	2				NaN	NaN	0	NaN	2335	2635	4969
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4973	17.553	NaN	23047	30	0	2455.4	0.106	+			12414	GEAKVKKQLV	10	90	550.3454457063077	1098.6763384794153	2	550.3455810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEAKVKKQLV_	ENSG00000125844|ENST00000377813|RRBP1;nc|ENSG00000125844|Q9P2E9-3|RRBP1;RRBP1|p.A628Gfs*69|1|0.35|ENSG00000125844|chr20:17621915-17621916|-/T|frameshift_variant	109.43880257439609	0.049666173740610824	2				NaN	NaN	0	NaN	2336	2635	4969
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4974	17.554	NaN	23217	30	0	3924.6	0.106	+			49143	VVMADPKGK	9	90	472.76537722131013	943.5162015094203	2	472.7650451660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVMADPKGK_	ENSG00000137038|ENST00000358227|DMAC1;ENST00000469050.1_1_9:7798575-7833931:-|nuORF;ENST00000484082.1_1_9:7798575-7800059:-|nuORF;nc|ENSG00000137038|Q96GE9|DMAC1	104.0567914643314	0.03506238181059741	2				NaN	NaN	0	NaN	2337	2635	4969
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4975	17.556	NaN	12013	30	0	3610.6	0.106			+	43322	TGARSLGLLVL	11	66	367.23240006758147	1098.6753708029444	3	367.2325134277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TGARSLGLLVL_	REV__ENSG00000120327|ENST00000239449|PCDHB14;REV__PCDHB14|p.D70Lfs*4|1|0.05|ENSG00000120327|chr5:141223712-141223713|-/CTCCATG|frameshift_variant	27.882242232435846	0.6973292152807183	2				NaN	NaN	0	NaN	2338	2635	4969
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4976	17.558	NaN	7146.7	30	0	731.23	0.034	+			15534	GVDGSVYKK	9	62	476.7584428376785	951.502332742157	2	476.75811767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GVDGSVYKK_	ENSG00000159399|ENST00000290573|HK2;ENST00000447818.2_1_X:79828255-79829731:-|nuORF	107.00750918261382	0.032051501805654005	2				NaN	NaN	0	NaN	2339	2635	4969
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4988	17.584	NaN	86479	30	0	14405	0.204	+			4257	ATGESIAVKK	10	105	502.29272665267285	1002.5709003721457	2	502.2927551269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATGESIAVKK_	DCLRE1C|p.R685Efs*6|1|0.37|ENSG00000152457|chr10:14908434-14908434|T/-|frameshift_variant;ENSG00000152457|ENST00000378278|DCLRE1C;nc|ENSG00000152457|Q96SD1-2|DCLRE1C;nc|ENSG00000152457|Q96SD1-3|DCLRE1C	173.2355992304161	0.0026567392549711405	2				NaN	NaN	0	NaN	2348	2638	4987
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4989	17.588	NaN	52573	30	0	25143	0.106	+			38673	SSIRHMIRK	9	74	564.3269160238707	1126.6392791145413	2	564.3274536132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSIRHMIRK_	ENSG00000108107|ENST00000344063|RPL28;nc|ENSG00000108107|P46779-2|RPL28;nc|ENSG00000108107|P46779-3|RPL28	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	2349	2638	4987
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4990	17.59	NaN	15841	30	0	1744.9	0.106			+	-1	CPTDCLDSAL	10	84	547.7287750839477	1093.4429972346952	2	547.72900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_CPTDC(Carbamidomethyl (C))LDSAL_	REV__ENST00000464546.5_3_3:112968599-112968665:+|nuORF	53.351449002276354	0.42630798468005626	2				NaN	NaN	0	NaN	2350	2638	4987
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4991	17.591	NaN	12332	30	0	2227.1	0.106				-1	REQMAIALK	9	67	538.2980475082638	1074.5815420833276	2	538.2987670898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_REQM(Oxidation (M))AIALK_	ENSG00000107104|ENST00000382297|KANK1;ENST00000354485.5_1_9:676972-730286:+|nuORF;ENST00000489369.5_1_9:676972-732786:+|nuORF;nc|ENSG00000107104|Q14678-2|KANK1	42.396135135203025	0.392153681582562	2				NaN	NaN	0	NaN	2351	2638	4987
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4992	17.593	NaN	20059	30	0	8201.6	0.106			+	29890	PLLPQREGP	9	68	336.1939263154652	1005.5599495465956	3	336.1940612792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PLLPQREGP_	REV__ENSG00000110446|ENST00000227880|SLC15A3	35.200714571348534	0.47427825964483533	2				NaN	NaN	0	NaN	2352	2638	4987
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4993	17.595	NaN	14193	30	0	2074.2	0.106			+	21522	KNQSTLRLID	10	82	594.3410050675799	1186.6674572019597	2	594.3411865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KNQSTLRLID_	REV__ZNF280B|p.S266R|1|0.14|ENSG00000275004|chr22:22488601-22488601|A/C|missense_variant	59.93077597824379	0.36646980200755325	2				NaN	NaN	0	NaN	2353	2638	4987
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	4994	17.597	NaN	10096	30	0	1238.1	0.035	+			49002	VVGPELHHK	9	65	508.2881269373153	1014.5617009414307	2	508.2884826660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VVGPELHHK_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	51.33545320467046	0.2872990594074956	2				NaN	NaN	0	NaN	2354	2638	4987
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5006	17.624	NaN	17068	30	0	1746.9	0.213	+			44794	TTQRPLHINK	10	86	604.3494507647765	1206.684348596353	2	604.34912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTQRPLHINK_	CACNA1C|p.A2072Pfs*18|1|0.55|ENSG00000151067|chr12:2688729-2688729|G/-|frameshift_variant;CACNA1C|p.P2073Qfs*17|1|0.21|ENSG00000151067|chr12:2688733-2688733|C/-|frameshift_variant;ENSG00000151067|ENST00000399655|CACNA1C;nc|ENSG00000151067|Q13936-10|CACNA1C;nc|ENSG00000151067|Q13936-11|CACNA1C;nc|ENSG00000151067|Q13936-13|CACNA1C;nc|ENSG00000151067|Q13936-14|CACNA1C;nc|ENSG00000151067|Q13936-15|CACNA1C;nc|ENSG00000151067|Q13936-16|CACNA1C;nc|ENSG00000151067|Q13936-17|CACNA1C;nc|ENSG00000151067|Q13936-18|CACNA1C;nc|ENSG00000151067|Q13936-19|CACNA1C;nc|ENSG00000151067|Q13936-2|CACNA1C;nc|ENSG00000151067|Q13936-20|CACNA1C;nc|ENSG00000151067|Q13936-21|CACNA1C;nc|ENSG00000151067|Q13936-22|CACNA1C;nc|ENSG00000151067|Q13936-23|CACNA1C;nc|ENSG00000151067|Q13936-24|CACNA1C;nc|ENSG00000151067|Q13936-25|CACNA1C;nc|ENSG00000151067|Q13936-26|CACNA1C;nc|ENSG00000151067|Q13936-27|CACNA1C;nc|ENSG00000151067|Q13936-28|CACNA1C;nc|ENSG00000151067|Q13936-29|CACNA1C;nc|ENSG00000151067|Q13936-3|CACNA1C;nc|ENSG00000151067|Q13936-30|CACNA1C;nc|ENSG00000151067|Q13936-31|CACNA1C;nc|ENSG00000151067|Q13936-32|CACNA1C;nc|ENSG00000151067|Q13936-33|CACNA1C;nc|ENSG00000151067|Q13936-34|CACNA1C;nc|ENSG00000151067|Q13936-35|CACNA1C;nc|ENSG00000151067|Q13936-36|CACNA1C;nc|ENSG00000151067|Q13936-37|CACNA1C;nc|ENSG00000151067|Q13936-4|CACNA1C;nc|ENSG00000151067|Q13936-5|CACNA1C;nc|ENSG00000151067|Q13936-6|CACNA1C;nc|ENSG00000151067|Q13936-7|CACNA1C;nc|ENSG00000151067|Q13936-8|CACNA1C;nc|ENSG00000151067|Q13936-9|CACNA1C;nc|ENSG00000151067|Q13936|CACNA1C	120.27252224102466	0.026944837168485097	2				NaN	NaN	0	NaN	2363	2641	5005
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5007	17.628	NaN	9472.3	30	0	1070.7	0.106	+			44287	TSANVTIRK	9	84	495.29060201590374	988.5666510986075	2	495.2903747558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TSANVTIRK_	CKAP2|p.K606Rfs*14|3|0.38|ENSG00000136108|chr13:52474899-52474899|A/-|frameshift_variant;CKAP2|p.R384Gfs*6|1|0.18|ENSG00000136108|chr13:52462405-52462405|A/-|frameshift_variant;CKAP2|p.T295Qfs*14|1|0.12|ENSG00000136108|chr13:52461702-52461702|A/-|frameshift_variant;CKAP2|p.T579Pfs*11|1|0.07|ENSG00000136108|chr13:52474011-52474011|A/-|frameshift_variant;ENSG00000136108|ENST00000258607|CKAP2;nc|ENSG00000136108|Q8WWK9-4|CKAP2;nc|ENSG00000136108|Q8WWK9-6|CKAP2;nc|ENSG00000136108|Q8WWK9|CKAP2	96.66504779109242	0.04607440320619715	2				NaN	NaN	0	NaN	2364	2641	5005
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5008	17.63	NaN	6376.4	30	0	1058.5	0.106	+			47126	VLPAPVAGHQ	10	76	330.19057376624926	987.5498918989479	3	330.1906433105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VLPAPVAGHQ_	ENST00000361490.8_1_10:100184114-100185647:-|nuORF	58.22992032128504	0.38193887838457763	2				NaN	NaN	0	NaN	2365	2641	5005
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5009	17.631	NaN	16700	30	0	3269.8	0.106			+	32017	QRLTSKLEGHA	11	76	620.343888936865	1238.67322494053	2	620.3441162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QRLTSKLEGHA_	REV__ENSG00000122483|ENST00000690025|CCDC18;REV__nc|ENSG00000122483|Q5T9S5-2|CCDC18;REV__nc|ENSG00000122483|Q5T9S5|CCDC18	52.936696900407355	0.3865048210802777	2				NaN	NaN	0	NaN	2366	2641	5005
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5010	17.633	NaN	6565	30	0	760.41	0.106	+			3246	ASLGASVHK	9	57	435.24564376262185	868.4767345920437	2	435.2454833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASLGASVHK_	ENSG00000239900|ENST00000623063|ADSL;nc|ENSG00000239900|P30566-2|ADSL	110.11987700582712	0.028875675806141952	2				NaN	NaN	0	NaN	2367	2641	5005
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5011	17.635	NaN	7033.2	30	0	943.36	0.106	+			38143	SQAEIYHNR	9	69	559.2730329524027	1116.5315129716053	2	559.2733154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SQAEIYHNR_	ENSG00000113845|ENST00000494664|TIMMDC1	63.53385203322761	0.18415635464017938	2				NaN	NaN	0	NaN	2368	2641	5005
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5012	17.637	NaN	3116.5	30	0	577.47	0.032				-1	 	0	49	400.7134553276449	799.4123577220898	2	400.7130432128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2369	2641	5005
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5023	17.662	NaN	12744	30	0	2680.8	0.214	+			39710	STIPPHVQK	9	75	503.7874821389092	1005.5604113446184	2	503.7874450683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STIPPHVQK_	ENSG00000163513|ENST00000295754|TGFBR2;nc|ENSG00000163513|P37173-2|TGFBR2;nc|ENSG00000163513|P37173-3|TGFBR2;TGFBR2|p.H523Rfs*19|1|0.27|ENSG00000163513|chr3:30691458-30691459|-/GACC|frameshift_variant	84.9155231211612	0.07920012719736333	2				NaN	NaN	0	NaN	2377	2644	5022
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5024	17.666	NaN	9024.9	30	0	1209.4	0.106	+			13849	GQTSLDRLR	9	76	523.2911449083135	1044.567736883427	2	523.2911987304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GQTSLDRLR_	ENSG00000141096|ENST00000268793|DPEP3;ENSG00000167261|ENST00000393847|DPEP2;nc|ENSG00000167261|Q9H4A9-3|DPEP2	51.33545320467046	0.2872990594074956	2				NaN	NaN	0	NaN	2378	2644	5022
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5025	17.668	NaN	14378	30	0	2265.7	0.106				-1	VTSGRVIARA	10	77	536.3171845203959	1070.6198161075918	2	536.3173217773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))VTSGRVIARA_	ENST00000261647.9_2_17:15903016-15903175:+|nuORF	51.19269402634007	0.44601001148513897	2				NaN	NaN	0	NaN	2379	2644	5022
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5026	17.67	NaN	15450	30	0	1695.8	0.106	+			21297	KLSAETLRP	9	81	507.80060006609455	1013.5866471989891	2	507.80078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KLSAETLRP_	ENST00000456943.6_1_6:2272473-2272845:+|nuORF	98.62937762414208	0.04060045538121712	2				NaN	NaN	0	NaN	2380	2644	5022
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5027	17.671	NaN	14957	30	0	3575.1	0.106	+			4740	ATMPKKGILKK	11	78	607.8864954086512	1213.7584378841022	2	607.8860473632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATMPKKGILKK_	ENSG00000074590|ENST00000261402|NUAK1;NUAK1|p.P507Rfs*6|1|0.5|ENSG00000074590|chr12:106067268-106067268|G/-|frameshift_variant	68.78561909154949	0.24586362119257035	2				NaN	NaN	0	NaN	2381	2644	5022
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5028	17.673	NaN	10932	30	0	1138.1	0.106	+			31493	QLDNKDIQ	8	71	487.2506602745615	NaN	0	487.2506408691406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QLDNKDIQ_	ENST00000509743.6_1_5:80769553-80770371:-|nuORF	74.25504064058377	1.7418937515398478	2				NaN	NaN	0	NaN	2382	2644	5022
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5029	17.675	NaN	10303	30	0	1994.8	0.036	+			2785	ARRARPEKQ	9	72	556.32758766929	NaN	0	556.3275146484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ARRARPEKQ_	ENST00000290858.10_1_16:67063120-67063363:+|nuORF	54.776311868738084	0.17377682019723872	2				NaN	NaN	0	NaN	2383	2644	5022
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5041	17.701	NaN	8535.7	30	0	1559.7	0.214			+	15863	GYGGQVLAG	9	57	411.211343002615	820.4081330720301	2	411.2110290527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GYGGQVLAG_	REV__ATRN|p.P984Lfs*34|1|0.23|ENSG00000088812|chr20:3584079-3584079|C/-|frameshift_variant;REV__ENSG00000088812|ENST00000262919|ATRN;REV__nc|ENSG00000088812|O75882-2|ATRN;REV__nc|ENSG00000088812|O75882-3|ATRN	60.29395666154354	0.21116425950210296	2				NaN	NaN	0	NaN	2392	2647	5040
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5042	17.705	NaN	8663	30	0	979.36	0.106	+			40053	STNNIAQAR	9	66	487.7536944164739	973.4928358997478	2	487.7535400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STNNIAQAR_	ENSG00000172380|ENST00000370982|GNG12;GNG12|p.F63Efs*8|1|0.1|ENSG00000172380|chr1:67705483-67705484|-/GAGATTTACCTTC|frameshift_variant	115.49404669440601	0.023927554121326553	2				NaN	NaN	0	NaN	2393	2647	5040
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5043	17.707	NaN	13315	30	0	1059.2	0.106	+			39797	STLDGVSRK	9	80	481.7667525279364	961.5189521226728	2	481.7665710449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STLDGVSRK_	ENSG00000163798|ENST00000326019|SLC4A1AP;nc|ENSG00000163798|Q9BWU0-1|SLC4A1AP;SLC4A1AP|p.L669Tfs*8|1|0.38|ENSG00000163798|chr2:27685159-27685160|-/A|frameshift_variant	118.74307786436346	0.02196067127630568	2				NaN	NaN	0	NaN	2394	2647	5040
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5044	17.709	NaN	12766	30	0	1327.3	0.106	+			46309	VEKGAATSV	9	67	431.23766515175146	860.4607773703029	2	431.2372741699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VEKGAATSV_	ENSG00000111726|ENST00000229329|CMAS;nc|ENSG00000111726|Q8NFW8-2|CMAS	141.52041321563706	0.009766778904176347	2				NaN	NaN	0	NaN	2395	2647	5040
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5045	17.71	NaN	17776	30	0	4997.7	0.106	+			43044	TELAQKKKI	9	87	353.55690763834286	1057.6488935152286	3	353.5570068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TELAQKKKI_	nc|ENSG00000122432|Q5VX52|SPATA1	54.776311868738084	0.25715957988447635	2				NaN	NaN	0	NaN	2396	2647	5040
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5046	17.712	NaN	5375.3	30	0	598.97	0.106	+			2870	ASAPVTVKR	9	66	464.7823075850437	927.5500622368875	2	464.7822570800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASAPVTVKR_	ENSG00000174579|ENST00000309993|MSL2;MSL2|p.K455Nfs*37|1|0.08|ENSG00000174579|chr3:136151516-136151516|T/-|frameshift_variant;MSL2|p.L557*|1|0.09|ENSG00000174579|chr3:136151211-136151211|A/-|frameshift_variant;nc|ENSG00000174579|Q9HCI7-2|MSL2	41.42661286455405	0.403525789677298	2				NaN	NaN	0	NaN	2397	2647	5040
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5047	17.714	NaN	12444	30	0	1840.4	0.035	+			14045	GSHTIRDLK	9	72	513.7882905991274	1025.5620282650548	2	513.7882690429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GSHTIRDLK_	ENSG00000197157|ENST00000354725|SND1;GAS2L3-SND1|1|fusion;SND1|p.A514Qfs*156|1|0.37|ENSG00000197157|chr7:127929195-127929195|A/-|frameshift_variant	122.93914200107957	0.019420478173996256	2				NaN	NaN	0	NaN	2398	2647	5040
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5059	17.739	NaN	15826	30	0	1697.9	0.214	+			42789	TEAKIKQKL	9	83	529.8324061175538	1057.6502593019075	2	529.8324584960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEAKIKQKL_	ENSG00000072501|ENST00000322213|SMC1A;SMC1A|p.R426W|1|0.44|ENSG00000072501|chrX:53409482-53409482|G/A|missense_variant	68.84614121027924	0.14577793175421136	2				NaN	NaN	0	NaN	2407	2650	5058
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5060	17.743	NaN	14375	30	0	5370.4	0.106	+			28579	NKKADGVKEP	10	80	362.53620994232415	1084.5868004271724	3	362.5363464355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NKKADGVKEP_	nc|ENSG00000058404|Q13554-6|CAMK2B	49.536043120802724	0.461275219792494	2				NaN	NaN	0	NaN	2408	2650	5058
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5061	17.745	NaN	15066	30	0	4485.2	0.106			+	22920	KVPQLVSAT	9	68	471.7849809638836	941.5554089945672	2	471.7845764160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KVPQLVSAT_	REV__ENSG00000198218|ENST00000395443|QRICH1;REV__QRICH1|p.N735Tfs*20|1|0.28|ENSG00000198218|chr3:49030581-49030581|G/-|frameshift_variant	51.33545320467046	0.2872990594074956	2				NaN	NaN	0	NaN	2409	2650	5058
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5062	17.747	NaN	7524.7	30	0	960.72	0.106	+			44148	TQLCPYFSSFK	11	77	689.3294977032352	1376.6444424732704	2	689.3284301757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_TQLC(Carbamidomethyl (C))PYFSSFK_	ENST00000509608.1_1_5:31464267-31468068:-|nuORF	51.52775601994872	0.4002081502334604	2				NaN	NaN	0	NaN	2410	2650	5058
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5063	17.749	NaN	11219	30	0	4518.9	0.106				-1	WCMIFPENLET	11	80	741.3249601810544	1480.6353674289087	2	741.3223266601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))WC(Carbamidomethyl (C))MIFPENLET_	ENST00000257770.7_1_6:86201700-86201742:+|nuORF	31.529811441608018	0.6590691889962369	2				NaN	NaN	0	NaN	2411	2650	5058
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5064	17.75	NaN	2992.9	30	0	468.38	0.106	+			20934	KKANPNNLQ	9	52	342.860894483022	1025.560854049266	3	342.8612060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KKANPNNLQ_	ENST00000354675.10_1_6:151670136-151670256:+|nuORF	39.252832667884924	0.4290233611298554	2				NaN	NaN	0	NaN	2412	2650	5058
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5065	17.752	NaN	22355	30	0	8460.1	0.035	+			3702	ATAALLRHK	9	76	490.8037425187376	979.5929321042752	2	490.8034973144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATAALLRHK_	ENSG00000170915|ENST00000442253|PAQR8	118.74307786436346	0.02196067127630568	2				NaN	NaN	0	NaN	2413	2650	5058
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5079	17.782	NaN	137120	30	0	35147	0.183				-1	 	0	94	602.8150290486363	1203.6155051640726	2	602.8148193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2424	2653	5078
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5080	17.785	NaN	26356	30	0	2799.7	0.106	+			41114	SVISHQHLSK	10	91	568.3148656904054	1134.6151784476108	2	568.3150024414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVISHQHLSK_	ENSG00000164749|ENST00000396423|HNF4G;nc|ENSG00000164749|Q14541-2|HNF4G;nc|ENSG00000164749|Q14541|HNF4G	159.33581866081465	0.006837894036646432	2				NaN	NaN	0	NaN	2425	2653	5078
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5081	17.787	NaN	5194.1	30	0	622.33	0.106	+			40394	STVDAEAVHK	10	71	528.7698815830139	1055.5252102328277	2	528.7698974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STVDAEAVHK_	ENSG00000116062|ENST00000234420|MSH6;nc|ENSG00000116062|P52701-3|MSH6;nc|ENSG00000116062|P52701-4|MSH6	88.17693792209575	0.14151128060301246	2				NaN	NaN	0	NaN	2426	2653	5078
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5082	17.789	NaN	11519	30	0	1960.6	0.106	+			40751	SVDGSLTHT	9	70	458.7223370368593	915.4301211405186	2	458.72198486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVDGSLTHT_	ENSG00000111077|ENST00000314250|TNS2;nc|ENSG00000111077|Q63HR2-2|TNS2;nc|ENSG00000111077|Q63HR2-4|TNS2;nc|ENSG00000111077|Q63HR2-5|TNS2;nc|ENSG00000111077|Q63HR2-6|TNS2;TNS2|p.K660Nfs*96|1|0.2|ENSG00000111077|chr12:53059615-53059615|G/-|frameshift_variant;TNS2|p.P495Rfs*25|2|0.33|ENSG00000111077|chr12:53059119-53059119|C/-|frameshift_variant	63.30626980617807	0.18605348971131092	2				NaN	NaN	0	NaN	2427	2653	5078
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5083	17.791	NaN	23899	30	0	2069.6	0.106	+			44603	TTDRYIQQK	9	79	576.8045883540628	NaN	0	576.8045043945312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TTDRYIQQK_	ENSG00000149480|ENST00000278823|MTA2;MTA2|p.A568Qfs*29|1|0.23|ENSG00000149480|chr11:62594402-62594402|T/-|frameshift_variant;MTA2|p.I556Hfs*8|1|0.29|ENSG00000149480|chr11:62594543-62594544|-/C|frameshift_variant;nc|ENSG00000149480|O94776-2|MTA2	114.85826248499774	0.0053097169743072554	2				NaN	NaN	0	NaN	2428	2653	5078
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5084	17.793	NaN	14652	30	0	1445.1	0.106	+			46840	VIFCNTKRK	9	77	583.3297266053089	NaN	0	583.3294067382812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_VIFC(Carbamidomethyl (C))NTKRK_	ENSG00000141543|ENST00000649764|EIF4A3;ENST00000575978.1_1_17:78111144-78112096:-|nuORF	138.8255168832474	0.0005774008586119536	2				NaN	NaN	0	NaN	2429	2653	5078
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5085	17.794	NaN	8556.4	30	0	2251.9	0.035			+	4609	ATLLGRRPP	9	54	327.53805206142084	979.5923267844626	3	327.5381164550781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATLLGRRPP_	REV__ENST00000476323.5_1_14:104029651-104038005:+|nuORF;REV__ENST00000492189.5_1_14:104029639-104053625:+|nuORF	18.324413293986947	0.6112419832031293	2				NaN	NaN	0	NaN	2430	2653	5078
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5098	17.821	NaN	31765	30	0	11234	0.214			+	41642	SVQSVDVLSL	10	59	349.52934957819457	1045.5662193347837	3	349.5295715332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVQSVDVLSL_	REV__ENSG00000176422|ENST00000338146|SPRYD4	42.396135135203025	0.5270658956260207	2				NaN	NaN	0	NaN	2440	2656	5097
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5099	17.825	NaN	22611	30	0	3422.1	0.106			+	42292	TAEHHAAVQHQ	11	84	614.7947651265088	1227.5749773198174	2	614.7943115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAEHHAAVQHQ_	REV__ENSG00000163092|ENST00000409195|XIRP2;REV__nc|ENSG00000163092|A4UGR9-2|XIRP2;REV__nc|ENSG00000163092|A4UGR9-3|XIRP2;REV__nc|ENSG00000163092|A4UGR9|XIRP2	35.15202426646627	0.6210751305041943	2				NaN	NaN	0	NaN	2441	2656	5097
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5100	17.827	NaN	23651	30	0	6404.4	0.106	+			15217	GTSSSAASSLK	11	73	498.2538181729957	994.4930834127914	2	498.25384521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTSSSAASSLK_	ARID1A|p.F2141Sfs*59|5|0.26|ENSG00000117713|chr1:26780313-26780313|C/-|frameshift_variant;ARID1A|p.K1161Sfs*19|1|0.29|ENSG00000117713|chr1:26772573-26772573|A/-|frameshift_variant;ARID1A|p.M1564Hfs*8|1|0.18|ENSG00000117713|chr1:26774910-26774911|-/C|frameshift_variant;ARID1A|p.N1475Tfs*6|1|0.36|ENSG00000117713|chr1:26774648-26774648|A/-|frameshift_variant;ARID1A|p.P1115Qfs*46|1|0.32|ENSG00000117713|chr1:26771260-26771260|C/-|frameshift_variant;ARID1A|p.P1326Rfs*155|1|0.15|ENSG00000117713|chr1:26773685-26773685|C/-|frameshift_variant;ARID1A|p.P1406Rfs*37|1|0.42|ENSG00000117713|chr1:26774444-26774448|CCCCA/-|frameshift_variant;ARID1A|p.P1568Lfs*44|1|0.14|ENSG00000117713|chr1:26774926-26774926|C/-|frameshift_variant;ARID1A|p.P1575Hfs*37|1|0.38|ENSG00000117713|chr1:26774947-26774947|C/-|frameshift_variant;ARID1A|p.P2114Rfs*21|1|0.46|ENSG00000117713|chr1:26780236-26780236|C/-|frameshift_variant;ARID1A|p.V2244Gfs*34|1|0.31|ENSG00000117713|chr1:26780626-26780627|-/G|frameshift_variant;ENSG00000049618|ENST00000636930|ARID1B;ENSG00000117713|ENST00000324856|ARID1A;nc|ENSG00000049618|Q8NFD5-1|ARID1B;nc|ENSG00000049618|Q8NFD5-2|ARID1B;nc|ENSG00000049618|Q8NFD5|ARID1B;nc|ENSG00000117713|O14497-2|ARID1A;nc|ENSG00000117713|O14497-3|ARID1A	136.5150327860613	0.0007853163747694189	2				NaN	NaN	0	NaN	2442	2656	5097
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5101	17.828	NaN	37232	30	0	8303.5	0.106	+			42014	SVYSGIRHK	9	79	523.79102028551	1045.5674876378198	2	523.7913208007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVYSGIRHK_	ENSG00000068383|ENST00000368594|INPP5A;ENST00000487614.1_1_10:134511381-134540457:+|nuORF;ENST00000498337.1_1_10:134523853-134567324:+|nuORF;INPP5A|p.P199H|1|0.09|ENSG00000068383|chr10:132710405-132710405|C/A|missense_variant;JAG1-INPP5A|1|fusion	129.42129120953632	0.01549634589885217	2				NaN	NaN	0	NaN	2443	2656	5097
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5102	17.83	NaN	13779	30	0	1688.3	0.106	+			13733	GQAVALRAK	9	81	457.2827038026654	912.5508546721309	2	457.282470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GQAVALRAK_	ENSG00000159692|ENST00000382952|CTBP1;ENST00000511907.1_1_4:1208072-1210006:-|nuORF;nc|ENSG00000159692|Q13363|CTBP1	148.04295825190792	0.0073252839830139265	2				NaN	NaN	0	NaN	2444	2656	5097
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5103	17.832	NaN	10761	30	0	1391.7	0.106			+	50313	WTDEEMGANHL	11	72	651.775128218907	1301.5357035046138	2	651.775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_WTDEEMGANHL_	REV__ENST00000448255.5_2_2:156880993-156881110:-|nuORF	22.579656572578934	0.7529490144093228	2				NaN	NaN	0	NaN	2445	2656	5097
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5104	17.834	NaN	17505	30	0	2364.7	0.035	+			40580	SVAELRSQK	9	83	509.2880824484902	1016.5616119637804	2	509.28826904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVAELRSQK_	ENSG00000131149|ENST00000253458|GSE1;nc|ENSG00000131149|Q14687-2|GSE1;nc|ENSG00000131149|Q14687-3|GSE1	180.09051358498644	0.0012869539350500664	2				NaN	NaN	0	NaN	2446	2656	5097
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5116	17.86	NaN	35374	30	0	3632.8	0.214	+			23147	KVYDKAINR	9	91	553.8193180332736	1105.624083133347	2	553.8197631835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVYDKAINR_	ENSG00000164190|ENST00000282516|NIPBL;ENST00000514335.1_1_5:37051847-37064632:+|nuORF;nc|ENSG00000164190|Q6KC79-2|NIPBL;NIPBL|p.I2776Lfs*3|1|0.17|ENSG00000164190|chr5:37064797-37064797|A/-|frameshift_variant	205.58602605338345	9.687353195239102E-06	2				NaN	NaN	0	NaN	2455	2659	5115
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5117	17.864	NaN	15464	30	0	3856.4	0.106	+			40746	SVDGPVSQK	9	67	458.7401489044989	NaN	0	458.7402038574219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVDGPVSQK_	ENSG00000119231|ENST00000323460|SENP5;nc|ENSG00000119231|Q96HI0-2|SENP5	72.87924865735499	0.09578366712754152	2				NaN	NaN	0	NaN	2456	2659	5115
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5118	17.866	NaN	13264	30	0	2592.8	0.106	+			14820	GTLGVAQHR	9	67	469.7619984169907	937.5094439007814	2	469.7616271972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTLGVAQHR_	ENSG00000132768|ENST00000255108|DPH2;nc|ENSG00000132768|Q9BQC3-3|DPH2	79.71258880314673	0.09879134589249085	2				NaN	NaN	0	NaN	2457	2659	5115
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5119	17.867	NaN	22234	30	0	8895.5	0.106	+			31164	QGIWSQLDH	9	70	542.263353984132	1082.5121550350639	2	542.2638549804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QGIWSQLDH_	ENSG00000203710|ENST00000367049|CR1;nc|ENSG00000203710|P17927|CR1	35.15202426646627	0.4747332964206883	2				NaN	NaN	0	NaN	2458	2659	5115
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5120	17.869	NaN	13924	30	0	5904.9	0.106				-1	 	0	75	334.76392494066573	667.5132969481315	2	334.7640075683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2459	2659	5115
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5121	17.871	NaN	14577	30	0	1713.1	0.106	+			22447	KTLELLNNIR	10	71	607.3672668770168	1212.7199808208336	2	607.3668823242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KTLELLNNIR_	ENSG00000081913|ENST00000262719|PHLPP1;nc|ENSG00000081913|O60346-2|PHLPP1;PHLPP1|p.N1186Tfs*10|1|0.14|ENSG00000081913|chr18:62963464-62963464|A/-|frameshift_variant;PHLPP1|p.T1236Nfs*38|2|0.39|ENSG00000081913|chr18:62972653-62972654|-/A|frameshift_variant	39.873155843976775	0.5503138860789152	2				NaN	NaN	0	NaN	2460	2659	5115
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5122	17.873	NaN	12858	30	0	2134.5	0.035	+			15522	GVCTKITQK	9	73	517.7865396239582	1033.5585263147163	2	517.7869262695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_GVC(Carbamidomethyl (C))TKITQK_	ENSG00000178229|ENST00000321545|ZNF543	148.98678547993487	0.0071052929883181565	2				NaN	NaN	0	NaN	2461	2659	5115
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5137	17.903	NaN	22743	30	0	4509.3	0.214				-1	VLLMCNKT	8	72	332.1733813736148	993.4983147210444	3	332.17352294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_VLLM(Oxidation (M))C(Carbamidomethyl (C))NKT_	ENST00000458542.1_1_3:25791186-25791384:+|nuORF	30.503639358989545	0.7238069182250283	2				NaN	NaN	0	NaN	2473	2662	5136
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5138	17.907	NaN	11405	30	0	2263.1	0.106	+			5877	AVIVDKKMQK	10	74	580.3469732597333	NaN	0	580.3469848632812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVIVDKKMQK_	ENSG00000205352|ENST00000429243|PRR13;nc|ENSG00000205352|Q9NZ81-2|PRR13	109.47833844074708	0.012738494387839895	2				NaN	NaN	0	NaN	2474	2662	5136
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5139	17.909	NaN	12588	30	0	1763.2	0.106	+			32205	QSYVTLRVP	9	76	531.800492874043	1061.586432814886	2	531.8005981445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QSYVTLRVP_	ENSG00000150893|ENST00000280481|FREM2	82.7504851949679	0.08565546331141553	2				NaN	NaN	0	NaN	2475	2662	5136
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5140	17.911	NaN	8220.3	30	0	1776.5	0.106	+			44791	TTQRLNATV	9	72	502.2797941737	NaN	0	502.3072509765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TTQRLNATV_	ADGRG4|p.D2874Rfs*16|1|0.45|ENSG00000156920|chrX:136403281-136403282|-/A|frameshift_variant;ADGRG4|p.F2955Vfs*21|1|0.32|ENSG00000156920|chrX:136405894-136405895|-/G|frameshift_variant;ADGRG4|p.N1783Kfs*3|1|0.45|ENSG00000156920|chrX:136349048-136349049|-/A|frameshift_variant;ADGRG4|p.P2406Lfs*10|1|0.85|ENSG00000156920|chrX:136361525-136361525|C/-|frameshift_variant;ADGRG4|p.R1598Qfs*86|1|0.06|ENSG00000156920|chrX:136348492-136348493|-/C|frameshift_variant;ENSG00000156920|ENST00000394143|ADGRG4;nc|ENSG00000156920|Q8IZF6-2|ADGRG4;nc|ENSG00000156920|Q8IZF6-3|ADGRG4	56.72105179125745	0.16330365735109603	2				NaN	NaN	0	NaN	2476	2662	5136
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5141	17.913	NaN	30980	30	0	7754	0.106			+	20715	KGSKEDELVA	10	86	538.2860906277975	1074.557628322395	2	538.285888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KGSKEDELVA_	REV__ENSG00000132554|ENST00000360863|RGS22;REV__nc|ENSG00000132554|Q8NE09-3|RGS22	90.36981228632155	0.12895663264417576	2				NaN	NaN	0	NaN	2477	2662	5136
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5142	17.914	NaN	10400	30	0	1158.9	0.106			+	19759	KDYTKKLR	8	74	526.3169802548779	1050.6194075765557	2	526.3168334960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KDYTKKLR_	REV__AKAP13|p.G2098D|1|0.26|ENSG00000170776|chr15:85722031-85722031|G/A|missense_variant	52.936696900407355	0.5717071646657654	2				NaN	NaN	0	NaN	2478	2662	5136
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5143	17.916	NaN	10825	30	0	1404.2	0.035	+			40060	STNNMAYNK	9	78	521.7348182834951	1041.45508363379	2	521.7347412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STNNMAYNK_	ENSG00000163110|ENST00000317968|PDLIM5	141.52041321563706	0.009766778904176347	2				NaN	NaN	0	NaN	2479	2662	5136
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5161	17.953	NaN	125790	30	0	60678	0.189	+			6860	CKSNWRGGWDW	11	99	697.8073068777348	1393.6000608222696	2	697.8060913085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CKSNWRGGWDW_	ENSG00000183560|ENST00000687084|IZUMO1R;nc|ENSG00000183560|A6ND01-2|IZUMO1R	56.632244143249146	0.3535169766007185	2				NaN	NaN	0	NaN	2494	2665	5160
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5162	17.956	NaN	12584	30	0	1280.5	0.106	+			46677	VGGSTRIPK	9	75	457.77467600692324	913.5347990806465	2	457.7744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VGGSTRIPK_	ENSG00000044574|ENST00000324460|HSPA5;ENSG00000109971|ENST00000534624|HSPA8;ENSG00000126803|ENST00000247207|HSPA2;ENSG00000173110|ENST00000309758|HSPA6;ENSG00000204388|ENST00000375650|HSPA1B;ENSG00000204389|ENST00000375651|HSPA1A;ENSG00000204390|ENST00000375654|HSPA1L;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;HSPA5|p.N522Ifs*12|1|0.36|ENSG00000044574|chr9:125236992-125236992|T/-|frameshift_variant;HSPA6|p.D632Gfs*9|1|0.12|ENSG00000173110|chr1:161526547-161526548|-/G|frameshift_variant;HSPA8|p.K569Dfs*6|1|0.3|ENSG00000109971|chr11:123058302-123058303|TC/-|frameshift_variant;nc|ENSG00000109971|P11142-2|HSPA8;nc|ENSG00000204389|P0DMV8-2|HSPA1A	82.7504851949679	0.08565546331141553	2				NaN	NaN	0	NaN	2495	2665	5160
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5163	17.958	NaN	166310	30	0	83081	0.106	+			33063	REKISLKR	8	113	515.3300353408265	1028.645517748453	2	515.3302001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_REKISLKR_	ENSG00000100227|ENST00000252115|POLDIP3;ENST00000491021.1_1_22:42993722-42998991:-|nuORF;nc|ENSG00000100227|Q9BY77-2|POLDIP3	47.95952297671804	0.6069220427029525	2				NaN	NaN	0	NaN	2496	2665	5160
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5164	17.96	NaN	18225	30	0	1787.8	0.106				-1	QCFPWRTSCSM	11	82	709.7874772116697	1417.5604014901394	2	709.7857055664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_QCFPWRTSC(Carbamidomethyl (C))SM(Oxidation (M))_	MED12L|p.S1098Pfs*15|1|0.19|ENSG00000144893|chr3:151367711-151367711|T/-|frameshift_variant	35.15202426646627	0.6210751305041943	2				NaN	NaN	0	NaN	2497	2665	5160
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5165	17.961	NaN	6039	30	0	1750	0.106	+			14105	GSLKPHDYPK	10	55	381.2048011831239	1140.5925741495716	3	381.20489501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GSLKPHDYPK_	ENSG00000107537|ENST00000263038|PHYH;nc|ENSG00000107537|O14832-2|PHYH	78.26377905018397	0.20980573808910843	2				NaN	NaN	0	NaN	2498	2665	5160
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5166	17.963	NaN	6791.7	30	0	1179.3	0.106			+	-1	EFCYSRFFWLR	11	78	805.8829759865955	1609.751399039991	2	805.8802490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_EFC(Carbamidomethyl (C))YSRFFWLR_	REV__ENST00000443617.6_1_15:64041916-64041982:-|nuORF	18.262085536374414	0.7849791996189919	2				NaN	NaN	0	NaN	2499	2665	5160
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5167	17.965	NaN	9849.8	30	0	1240.9	0.042			+	-1	TYRPMECQECC	11	71	746.7694359432472	1491.5243189532944	2	746.7667846679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C),Oxidation (M)	_TYRPM(Oxidation (M))EC(Carbamidomethyl (C))QEC(Carbamidomethyl (C))C_	REV__TAB3|p.R702C|1|0.11|ENSG00000157625|chrX:30831462-30831462|G/A|missense_variant	9.182911543092327	0.8274909109651483	2				NaN	NaN	0	NaN	2500	2665	5160
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5185	18.002	NaN	27775	30	0	3882.3	0.214	+			2565	AQATVHVVK	9	78	476.78202953864127	951.5495061440826	2	476.78204345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AQATVHVVK_	ENST00000430374.5_1_2:217279626-217279842:+|nuORF	129.42129120953632	0.01549634589885217	2				NaN	NaN	0	NaN	2515	2668	5184
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5186	18.006	NaN	14235	30	0	1866.1	0.106	+			41534	SVQAASGIRR	10	85	522.7990270550134	NaN	0	522.799072265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVQAASGIRR_	ENSG00000198589|ENST00000651943|LRBA;LRBA|p.L2590*|1|0.41|ENSG00000198589|chr4:150310342-150310342|A/-|frameshift_variant;LRBA|p.T2011Qfs*11|1|0.19|ENSG00000198589|chr4:150599022-150599022|T/-|frameshift_variant;nc|ENSG00000198589|P50851-2|LRBA;nc|ENSG00000198589|P50851|LRBA	120.30596017624542	0.018890087788199523	2				NaN	NaN	0	NaN	2516	2668	5184
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5187	18.008	NaN	17694	30	0	3635.6	0.106	+			15545	GVFEGHTSK	9	80	481.24036143721173	960.4661699412235	2	481.2401123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GVFEGHTSK_	ENSG00000103994|ENST00000564754|ZNF106;nc|ENSG00000103994|Q9H2Y7-2|ZNF106;nc|ENSG00000103994|Q9H2Y7|ZNF106	124.08010499294276	0.018729767491916592	2				NaN	NaN	0	NaN	2517	2668	5184
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5188	18.009	NaN	7679.7	30	0	1259.7	0.106			+	46629	VGAGYYQSLL	10	72	535.7796130587301	1069.54467318426	2	535.7799682617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VGAGYYQSLL_	REV__CON__ENSEMBL:ENSBTAP00000016285;REV__ENSG00000161031|ENST00000340880|PGLYRP2;REV__nc|ENSG00000161031|Q96PD5-2|PGLYRP2	38.80614096846853	0.5601458937078225	2				NaN	NaN	0	NaN	2518	2668	5184
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5189	18.011	NaN	12166	30	0	1293.7	0.106	+			22308	KTETPIVSK	9	75	334.8655721532451	1001.5748870599355	3	334.86572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KTETPIVSK_	ENSG00000124164|ENST00000475243|VAPB;ENST00000463370.5_1_20:57007450-57019288:+|nuORF;ENST00000476395.1_1_20:57015848-57019288:+|nuORF	70.8162118820467	0.13725933411854815	2				NaN	NaN	0	NaN	2519	2668	5184
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5190	18.013	NaN	34761	30	0	6086.4	0.035	+			40201	STSCPVVQK	9	87	503.25528094153043	1004.4960089498609	2	503.2551574707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_STSC(Carbamidomethyl (C))PVVQK_	ENSG00000130935|ENST00000253247|NOL11;ENST00000583108.5_1_17:65733963-65734484:+|nuORF	171.38481719736927	0.0025305361306121837	2				NaN	NaN	0	NaN	2520	2668	5184
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5191	18.014	NaN	18089	30	0	3260.7	0.143			+	9615	ELNKRMEQN	9	83	589.2851666315098	1176.5557803298195	2	589.268310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_ELNKRM(Oxidation (M))EQN_	REV__CEP290|p.E1553Kfs*4|1|0.52|ENSG00000198707|chr12:88084634-88084634|T/-|frameshift_variant;REV__CEP290|p.E326Ifs*8|1|0.15|ENSG00000198707|chr12:88126402-88126405|ACTC/-|frameshift_variant;REV__CEP290|p.I2385*|1|0.37|ENSG00000198707|chr12:88050410-88050410|T/-|frameshift_variant;REV__CEP290|p.L2448Tfs*8|1|0.11|ENSG00000198707|chr12:88049282-88049283|-/T|frameshift_variant;REV__CEP290|p.M1079Cfs*9|1|0.24|ENSG00000198707|chr12:88093844-88093844|T/-|frameshift_variant;REV__CEP290|p.N882Ifs*10|1|0.2|ENSG00000198707|chr12:88106847-88106847|T/-|frameshift_variant;REV__CEP290|p.R2306Nfs*40|1|0.14|ENSG00000198707|chr12:88055616-88055619|TCTC/-|frameshift_variant;REV__ENSG00000198707|ENST00000552810|CEP290	52.936696900407355	0.27249468807391813	2				NaN	NaN	0	NaN	2521	2668	5184
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5205	18.043	NaN	57168	30	0	11667	0.214	+			4058	ATDIPSSQK	9	87	473.745721533066	945.476890132932	2	473.74560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATDIPSSQK_	APC|p.A1296Qfs*9|1|0.88|ENSG00000134982|chr5:112839478-112839478|A/-|frameshift_variant;APC|p.A1305Sfs*10|1|0.24|ENSG00000134982|chr5:112839504-112839505|-/T|frameshift_variant;APC|p.A1351Gfs*3|1|0.81|ENSG00000134982|chr5:112839644-112839645|-/G|frameshift_variant;APC|p.A1446Vfs*27|1|0.38|ENSG00000134982|chr5:112839931-112839931|C/-|frameshift_variant;APC|p.A1492Cfs*22|2|0.29|ENSG00000134982|chr5:112840063-112840064|-/T|frameshift_variant;APC|p.A1492Pfs*15|1|0.69|ENSG00000134982|chr5:112840068-112840068|G/-|frameshift_variant;APC|p.C1249Sfs*16|1|0.59|ENSG00000134982|chr5:112839340-112839340|G/-|frameshift_variant;APC|p.C1387*|1|0.31|ENSG00000134982|chr5:112839749-112839750|-/AGAT|frameshift_variant;APC|p.C1578Mfs*13|1|0.68|ENSG00000134982|chr5:112840323-112840324|-/A|frameshift_variant;APC|p.D1486Ifs*21|2|0.76|ENSG00000134982|chr5:112840049-112840049|T/-|frameshift_variant;APC|p.E1322Rfs*10|1|0.15|ENSG00000134982|chr5:112839556-112839557|-/C|frameshift_variant;APC|p.E1353Nfs*62|1|0.5|ENSG00000134982|chr5:112839649-112839649|T/-|frameshift_variant;APC|p.E1397Gfs*18|1|0.76|ENSG00000134982|chr5:112839784-112839784|A/-|frameshift_variant;APC|p.E1464Vfs*8|2|0.27|ENSG00000134982|chr5:112839979-112839982|AGAG/-|frameshift_variant;APC|p.E1494Kfs*13|1|0.84|ENSG00000134982|chr5:112840073-112840073|G/-|frameshift_variant;APC|p.E1544Nfs*21|1|0.05|ENSG00000134982|chr5:112840220-112840220|T/-|frameshift_variant;APC|p.E1552Qfs*12|1|0.31|ENSG00000134982|chr5:112840247-112840250|AGAG/-|frameshift_variant;APC|p.E1576Kfs*74|1|0.61|ENSG00000134982|chr5:112840319-112840319|A/-|frameshift_variant;APC|p.F1491Lfs*16|1|0.27|ENSG00000134982|chr5:112840064-112840064|T/-|frameshift_variant;APC|p.G1288*|1|0.58|ENSG00000134982|chr5:112839452-112839453|-/AT|frameshift_variant;APC|p.H1490Nfs*25|1|0.21|ENSG00000134982|chr5:112840059-112840060|-/TAAA|frameshift_variant;APC|p.H1490Tfs*24|1|0.23|ENSG00000134982|chr5:112840060-112840061|-/A|frameshift_variant;APC|p.H1490Yfs*18|1|0.48|ENSG00000134982|chr5:112840059-112840060|-/TA|frameshift_variant;APC|p.I1304Mfs*4|1|0.28|ENSG00000134982|chr5:112839506-112839506|A/-|frameshift_variant;APC|p.I1307Rfs*6|1|0.12|ENSG00000134982|chr5:112839511-112839515|AAATA/-|frameshift_variant;APC|p.I1311Lfs*10|1|0.45|ENSG00000134982|chr5:112839524-112839524|G/-|frameshift_variant;APC|p.I1311Rfs*3|1|0.46|ENSG00000134982|chr5:112839526-112839527|TT/-|frameshift_variant;APC|p.I1401Mfs*14|1|0.73|ENSG00000134982|chr5:112839796-112839796|T/-|frameshift_variant;APC|p.I1417Hfs*6|1|0.53|ENSG00000134982|chr5:112839839-112839840|-/G|frameshift_variant;APC|p.I1557*|1|0.43|ENSG00000134982|chr5:112840262-112840263|TA/-|frameshift_variant;APC|p.I1574Yfs*2|1|0.36|ENSG00000134982|chr5:112840312-112840312|A/-|frameshift_variant;APC|p.I1580Lfs*69|1|0.59|ENSG00000134982|chr5:112840330-112840333|TTAT/-|frameshift_variant;APC|p.I1580Nfs*11|1|0.36|ENSG00000134982|chr5:112840331-112840332|-/A|frameshift_variant;APC|p.K1454Lfs*20|1|0.81|ENSG00000134982|chr5:112839952-112839953|-/TT|frameshift_variant;APC|p.L1302Cfs*3|1|0.77|ENSG00000134982|chr5:112839496-112839496|C/-|frameshift_variant;APC|p.L1337Pfs*4|1|0.82|ENSG00000134982|chr5:112839604-112839605|TG/-|frameshift_variant;APC|p.L1488Ffs*17|1|0.27|ENSG00000134982|chr5:112840057-112840063|TATTACA/-|frameshift_variant;APC|p.L1488Yfs*19|2|0.41|ENSG00000134982|chr5:112840055-112840055|T/-|frameshift_variant;APC|p.L1489Kfs*19|1|0.34|ENSG00000134982|chr5:112840058-112840074|ATTACATTTTGCCACGG/-|frameshift_variant;APC|p.L1489Yfs*18|3|0.26|ENSG00000134982|chr5:112840059-112840059|T/-|frameshift_variant;APC|p.M1383Ifs*3|1|0.64|ENSG00000134982|chr5:112839741-112839742|-/T|frameshift_variant;APC|p.M1431Cfs*42|1|0.4|ENSG00000134982|chr5:112839883-112839883|C/-|frameshift_variant;APC|p.N1455Ifs*18|1|0.15|ENSG00000134982|chr5:112839954-112839954|A/-|frameshift_variant;APC|p.N1531Rfs*31|1|0.18|ENSG00000134982|chr5:112840186-112840195|ATGACAATGG/-|frameshift_variant;APC|p.N1535Mfs*30|1|0.28|ENSG00000134982|chr5:112840194-112840194|G/-|frameshift_variant;APC|p.P1319Lfs*2|2|0.32|ENSG00000134982|chr5:112839549-112839549|C/-|frameshift_variant;APC|p.P1319Lfs*3|1|0.27|ENSG00000134982|chr5:112839547-112839548|-/TC|frameshift_variant;APC|p.P1330Qfs*11|1|0.22|ENSG00000134982|chr5:112839583-112839584|CT/-|frameshift_variant;APC|p.P1439Lfs*34|4|0.34|ENSG00000134982|chr5:112839909-112839909|C/-|frameshift_variant;APC|p.P1442Lfs*31|1|0.41|ENSG00000134982|chr5:112839918-112839918|C/-|frameshift_variant;APC|p.P1453Lfs*20|2|0.29|ENSG00000134982|chr5:112839951-112839951|C/-|frameshift_variant;APC|p.Q1429Dfs*45|1|0.42|ENSG00000134982|chr5:112839875-112839876|-/GG|frameshift_variant;APC|p.Q1447Sfs*24|1|0.77|ENSG00000134982|chr5:112839931-112839937|CTCAAAC/-|frameshift_variant;APC|p.R1435Efs*38|1|0.41|ENSG00000134982|chr5:112839897-112839897|A/-|frameshift_variant;APC|p.R1435Lfs*31|1|0.38|ENSG00000134982|chr5:112839896-112839917|CAGAAGTAAAACACCTCCACCA/-|frameshift_variant;APC|p.S1205Tfs*60|1|0.36|ENSG00000134982|chr5:112839208-112839208|G/-|frameshift_variant;APC|p.S1272Ffs*4|1|0.15|ENSG00000134982|chr5:112839403-112839404|-/T|frameshift_variant;APC|p.S1355Ffs*62|1|0.37|ENSG00000134982|chr5:112839653-112839654|-/TTTTT|frameshift_variant;APC|p.S1355Lfs*60|2|0.6|ENSG00000134982|chr5:112839654-112839654|T/-|frameshift_variant;APC|p.S1398Ifs*17|1|0.86|ENSG00000134982|chr5:112839787-112839787|G/-|frameshift_variant;APC|p.S1400*|1|0.45|ENSG00000134982|chr5:112839793-112839793|C/-|frameshift_variant;APC|p.S1403Mfs*13|1|0.05|ENSG00000134982|chr5:112839799-112839818|CCAGCTCCGTTCAGAGTGAA/-|frameshift_variant;APC|p.S1407Vfs*8|1|0.39|ENSG00000134982|chr5:112839812-112839812|G/-|frameshift_variant;APC|p.S1411Rfs*4|1|0.42|ENSG00000134982|chr5:112839827-112839827|T/-|frameshift_variant;APC|p.S1419*|1|0.33|ENSG00000134982|chr5:112839844-112839845|-/TA|frameshift_variant;APC|p.S1421Mfs*52|1|0.67|ENSG00000134982|chr5:112839856-112839856|G/-|frameshift_variant;APC|p.S1421Vfs*52|1|0.51|ENSG00000134982|chr5:112839855-112839855|A/-|frameshift_variant;APC|p.S1436Rfs*38|1|0.42|ENSG00000134982|chr5:112839899-112839900|-/AG|frameshift_variant;APC|p.S1436Vfs*37|1|0.37|ENSG00000134982|chr5:112839899-112839899|A/-|frameshift_variant;APC|p.S1465Rfs*9|3|0.3|ENSG00000134982|chr5:112839978-112839979|-/AG|frameshift_variant;APC|p.S1501Ffs*13|1|0.5|ENSG00000134982|chr5:112840091-112840092|-/T|frameshift_variant;APC|p.S1581Lfs*69|1|0.34|ENSG00000134982|chr5:112840333-112840333|T/-|frameshift_variant;APC|p.T1313Nfs*2|1|0.51|ENSG00000134982|chr5:112839529-112839530|-/A|frameshift_variant;APC|p.T1487Yfs*18|1|0.1|ENSG00000134982|chr5:112840051-112840057|ATACTTT/-|frameshift_variant;APC|p.T1493Rfs*14|2|0.34|ENSG00000134982|chr5:112840069-112840069|C/-|frameshift_variant;APC|p.T1496Kfs*19|1|0.17|ENSG00000134982|chr5:112840075-112840076|-/AAGT|frameshift_variant;APC|p.T1556Lfs*9|1|0.61|ENSG00000134982|chr5:112840255-112840255|A/-|frameshift_variant;APC|p.T1556Nfs*3|11|0.46|ENSG00000134982|chr5:112840254-112840255|-/A|frameshift_variant;APC|p.V1390Ffs*6|1|0.39|ENSG00000134982|chr5:112839757-112839758|-/TTCT|frameshift_variant;APC|p.V1414*|4|0.37|ENSG00000134982|chr5:112839833-112839833|G/-|frameshift_variant;APC|p.V1414Efs*5|1|0.58|ENSG00000134982|chr5:112839835-112839835|T/-|frameshift_variant;ENSG00000134982|ENST00000257430|APC;nc|ENSG00000134982|P25054-2|APC;nc|ENSG00000134982|P25054-3|APC	104.0567914643314	0.03506238181059741	2				NaN	NaN	0	NaN	2532	2671	5204
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5206	18.047	NaN	18773	30	0	2420.4	0.106	+			18733	ITHAVVIKK	9	83	504.8318865451187	1007.6492201570375	2	504.8319091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ITHAVVIKK_	ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;ENST00000565932.5_1_16:28734455-28746831:+|nuORF;nc|ENSG00000184110|Q99613-2|EIF3C	109.43880257439609	0.029570636687953285	2				NaN	NaN	0	NaN	2533	2671	5204
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5207	18.049	NaN	11635	30	0	2250.7	0.106	+			39879	STLPPVKSK	9	77	478.7921372069673	955.5697214807346	2	478.7925720214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STLPPVKSK_	ARFGEF1|p.F1680Lfs*8|1|0.29|ENSG00000066777|chr8:67203171-67203171|A/-|frameshift_variant;ARFGEF1|p.F501Lfs*19|1|0.46|ENSG00000066777|chr8:67271771-67271771|A/-|frameshift_variant;ARFGEF1|p.G612Vfs*2|1|0.33|ENSG00000066777|chr8:67266964-67266964|T/-|frameshift_variant;ARFGEF1|p.K888Rfs*10|1|0.36|ENSG00000066777|chr8:67253485-67253486|TT/-|frameshift_variant;ENSG00000066777|ENST00000262215|ARFGEF1	101.25262130126117	0.03792372629710479	2				NaN	NaN	0	NaN	2534	2671	5204
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5208	18.051	NaN	12303	30	0	1651.1	0.106	+			39552	STGEEVAMRK	10	79	554.2770078833721	1106.5394628335441	2	554.277099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STGEEVAMRK_	ENSG00000160789|ENST00000368300|LMNA;ENST00000496738.5_1_1:156106882-156107552:+|nuORF;nc|ENSG00000160789|P02545-2|LMNA;nc|ENSG00000160789|P02545-4|LMNA;nc|ENSG00000160789|P02545-5|LMNA;nc|ENSG00000160789|P02545-6|LMNA	66.96192283764107	0.30252237217063654	2				NaN	NaN	0	NaN	2535	2671	5204
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5209	18.053	NaN	14374	30	0	3110.3	0.106			+	46705	VGLIFLTEH	9	78	514.7910406412101	1027.56752834922	2	514.7904663085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VGLIFLTEH_	REV__ENSG00000255561|ENST00000260257|FDXACB1;REV__nc|ENSG00000255561|Q9BRP7-2|FDXACB1	54.776311868738084	0.25715957988447635	2				NaN	NaN	0	NaN	2536	2671	5204
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5210	18.054	NaN	9542.3	30	0	2096.6	0.034	+			2604	AQGPSSQLK	9	66	458.24839727737884	914.4822416215577	2	458.24822998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AQGPSSQLK_	ENST00000349792.9_1_1:151171082-151171205:+|nuORF	68.84614121027924	0.14577793175421136	2				NaN	NaN	0	NaN	2537	2671	5204
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5211	18.055	NaN	10284	30	0	2470.8	0.14	+			14307	GSYLAHTQGK	10	74	531.2727976375166	NaN	0	531.2520141601562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GSYLAHTQGK_	ENSG00000104897|ENST00000221494|SF3A2;ENST00000590034.2_1_19:2244656-2244779:+|nuORF;ENST00000592314.5_1_19:2243417-2246882:+|nuORF;ENST00000592839.6_1_19:2243417-2245742:+|nuORF;SF3A2|p.P297Lfs*149|1|0.56|ENSG00000104897|chr19:2248037-2248037|C/-|frameshift_variant;SF3A2|p.T267Qfs*179|1|0.62|ENSG00000104897|chr19:2247944-2247944|C/-|frameshift_variant	50.033510581677724	0.305390621352984	2				NaN	NaN	0	NaN	2538	2671	5204
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5228	18.09	NaN	63278	30	0	7576.8	0.214	+			4110	ATDYGTIKK	9	94	498.77137470478823	995.5281964763765	2	498.771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATDYGTIKK_	ENSG00000112902|ENST00000382496|SEMA5A	169.6522961985778	0.0028262690464207238	2				NaN	NaN	0	NaN	2552	2674	5227
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5229	18.094	NaN	68183	30	0	15690	0.106	+			6044	AVMGNPKVK	9	94	472.27325592193563	942.5319589106713	2	472.2731018066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVMGNPKVK_	ENSG00000223609|ENST00000650601|HBD;ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF;HBD|p.A63V|1|0.34|ENSG00000223609|chr11:5234118-5234118|G/A|missense_variant	102.7733458925114	0.03637199559902695	2				NaN	NaN	0	NaN	2553	2674	5227
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5230	18.096	NaN	27517	30	0	6077	0.106				-1	 	0	83	324.2164694326295	323.2091929660295	1	324.2168884277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2554	2674	5227
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5231	18.098	NaN	8455.4	30	0	736.44	0.106	+			15232	GTSSVIVSRK	10	72	517.3037357464559	1032.5929185597117	2	517.3037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTSSVIVSRK_	ENSG00000072803|ENST00000517395|FBXW11;nc|ENSG00000072803|Q9UKB1-2|FBXW11;nc|ENSG00000072803|Q9UKB1-3|FBXW11;nc|ENSG00000072803|Q9UKB1|FBXW11	68.84614121027924	0.2867470276772903	2				NaN	NaN	0	NaN	2555	2674	5227
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5232	18.1	NaN	14994	30	0	2923.3	0.106	+			39279	STARLWDHKK	10	72	621.3411866829564	1240.6678204327127	2	621.3413696289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STARLWDHKK_	ENST00000529974.1_1_11:88068229-88070878:-|nuORF	90.14881205920913	0.1302219035121668	2				NaN	NaN	0	NaN	2556	2674	5227
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5233	18.102	NaN	8736.9	30	0	1012	0.041				-1	RSCMTRWSWSP	11	67	706.813217048888	1411.6118811645758	2	706.8111572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_RSCM(Oxidation (M))TRWSWSP_	ENST00000379772.3_1_20:3736241-3740779:-|nuORF	20.030474535948922	0.7766990143561855	2				NaN	NaN	0	NaN	2557	2674	5227
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5234	18.102	NaN	10236	30	0	1791.3	0.144			+	-1	GLCGPCDPSQ	10	77	545.7162281085135	NaN	0	545.7163696289062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C)	_GLC(Carbamidomethyl (C))GPC(Carbamidomethyl (C))DPSQ_	REV__SLC25A34|p.A7Sfs*197|1|0.27|ENSG00000162461|chr1:15736497-15736498|-/C|frameshift_variant	41.42661286455405	0.3598046802465243	2				NaN	NaN	0	NaN	2558	2674	5227
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5249	18.136	NaN	156330	30	0	24083	0.203			+	38124	SPVVLQNDR	9	122	514.2801629076988	NaN	0	514.2802734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SPVVLQNDR_	REV__ENSG00000232810|ENST00000449264|TNF	75.04331003522576	0.0883683072398826	2				NaN	NaN	0	NaN	2570	2677	5248
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5250	18.139	NaN	47419	30	0	3703.6	0.106	+			4825	ATNYITRNK	9	94	540.7937663760446	1079.572979818889	2	540.7940063476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATNYITRNK_	ENSG00000100029|ENST00000354694|PES1;ENST00000466614.1_1_22:30983271-30987820:-|nuORF;nc|ENSG00000100029|O00541-2|PES1	128.60217544463768	0.015992218256422188	2				NaN	NaN	0	NaN	2571	2677	5248
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5251	18.141	NaN	12030	30	0	1624.9	0.106				-1	TTCEQIVRK	9	84	567.8006120600865	NaN	0	567.8007202148438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_TTC(Carbamidomethyl (C))EQIVRK_	ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1;nc|ENSG00000125107|A5YKK6-4|CNOT1	96.0336014099291	0.029433397039169355	2				NaN	NaN	0	NaN	2572	2677	5248
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5252	18.143	NaN	8778	30	0	938.19	0.106	+			49081	VVKRIFSK	8	70	488.8186600443517	975.6227671555034	2	488.8185729980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVKRIFSK_	DEPDC7|p.F420Lfs*11|1|0.37|ENSG00000121690|chr11:33032786-33032786|T/-|frameshift_variant;ENSG00000121690|ENST00000241051|DEPDC7;nc|ENSG00000121690|Q96QD5-2|DEPDC7	71.29570347882199	0.39610197767395533	2				NaN	NaN	0	NaN	2573	2677	5248
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5253	18.145	NaN	10590	30	0	1338.7	0.106	+			20373	KESTITRKL	9	74	538.3276795605855	1074.6408061879708	2	538.32763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KESTITRKL_	ENSG00000164687|ENST00000297258|FABP5;ENST00000477993.1_1_7:152139729-152140032:+|nuORF;nc|ENSG00000293165|A8MUU1|FABP5P3	80.45461616416974	0.09558281504443908	2				NaN	NaN	0	NaN	2574	2677	5248
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5254	18.147	NaN	3109.6	30	0	325.69	0.106			+	13630	GMGPGVKK	8	54	387.220655608241	772.426758283282	2	387.2206115722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GMGPGVKK_	REV__ENST00000465814.5_1_11:72423956-72425365:-|nuORF	44.53106598305862	0.628196326904373	2				NaN	NaN	0	NaN	2575	2677	5248
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5255	18.148	NaN	4992.8	30	0	1570.9	0.035				-1	 	0	53	324.2164694326295	323.2091929660295	1	326.2148742675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2576	2677	5248
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5268	18.176	NaN	115650	30	0	34733	0.16	+			32184	QSSTLNLHK	9	81	343.1889498491983	1026.545020147795	3	343.18914794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QSSTLNLHK_	ENSG00000250312|ENST00000510175|ZNF718;nc|ENSG00000250312|Q3SXZ3-2|ZNF718	42.396135135203025	0.392153681582562	2				NaN	NaN	0	NaN	2586	2680	5267
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5269	18.179	NaN	59565	30	0	17698	0.106	+			40712	SVCGKGFSR	9	99	499.24757083961265	996.4805887460253	2	499.24755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SVC(Carbamidomethyl (C))GKGFSR_	ENSG00000136451|ENST00000581208|VEZF1;ENST00000423931.1_1_3:192873384-192874521:-|nuORF	84.81729255234993	0.07947707105691067	2				NaN	NaN	0	NaN	2587	2680	5267
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5270	18.181	NaN	35797	30	0	5870.5	0.106				-1	 	0	76	526.2595074417319	1050.5044619502637	2	526.2596435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2588	2680	5267
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5271	18.183	NaN	19390	30	0	2169.5	0.106	+			40216	STSDSVRLK	9	83	496.7721251496342	991.5296973660684	2	496.77197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STSDSVRLK_	ENSG00000187735|ENST00000521604|TCEA1;ENST00000521086.6_1_8:54891227-54912595:-|nuORF;ENST00000522397.5_1_8:54883012-54934915:-|nuORF;nc|ENSG00000187735|P23193-2|TCEA1	127.46168284122857	0.016682644177004526	2				NaN	NaN	0	NaN	2589	2680	5267
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5272	18.184	NaN	28855	30	0	11925	0.106	+			40713	SVCGKGFSR	9	70	333.1673124625539	996.4801079878619	3	333.1676025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_SVC(Carbamidomethyl (C))GKGFSR_	ENSG00000136451|ENST00000581208|VEZF1;ENST00000423931.1_1_3:192873384-192874521:-|nuORF	47.227680397652996	0.3354815899219835	2				NaN	NaN	0	NaN	2590	2680	5267
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5273	18.186	NaN	15604	30	0	2483.2	0.106	+			2658	AQMRAAINQK	10	76	565.8078105863028	1129.6010682394055	2	565.8086547851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AQMRAAINQK_	ENSG00000120533|ENST00000521688|ENY2;ENST00000517756.5_1_8:110346694-110355643:+|nuORF;ENST00000518584.5_1_8:110346694-110352812:+|nuORF;ENST00000519754.5_1_8:110348365-110351660:+|nuORF;ENST00000522632.1_1_8:110346694-110348434:+|nuORF;nc|ENSG00000120533|Q9NPA8-2|ENY2	101.60071028292904	0.07294315263144992	2				NaN	NaN	0	NaN	2591	2680	5267
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5274	18.188	NaN	21630	30	0	2764.1	0.035	+			14251	GSSTIRNLK	9	85	488.2819741772615	974.549395421323	2	488.282470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GSSTIRNLK_	ENSG00000143393|ENST00000368873|PI4KB;nc|ENSG00000143393|Q9UBF8-2|PI4KB;nc|ENSG00000143393|Q9UBF8-3|PI4KB	72.87924865735499	0.12833875048249987	2				NaN	NaN	0	NaN	2592	2680	5267
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5285	18.213	NaN	149750	30	0	26696	0.163	+			5855	AVIQGQAVRK	10	98	535.3277160583718	1068.6408791835436	2	535.3276977539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVIQGQAVRK_	ENSG00000099812|ENST00000215582|MISP	134.7655990226056	0.012149689860786373	2				NaN	NaN	0	NaN	2600	2683	5284
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5286	18.216	NaN	19905	30	0	3129.4	0.106	+			1858	AILDKTTNK	9	80	502.29272131725463	NaN	0	502.2926025390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AILDKTTNK_	ENSG00000076067|ENST00000262031|RBMS2;ENSG00000153250|ENST00000348849|RBMS1;nc|ENSG00000153250|P29558-2|RBMS1	162.63603312974413	0.012768717674795909	2				NaN	NaN	0	NaN	2601	2683	5284
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5287	18.218	NaN	59286	30	0	5321.9	0.106	+			5294	ATVITTEKR	9	98	509.7984235007358	1017.5822940682716	2	509.79827880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATVITTEKR_	ENSG00000146555|ENST00000404826|SDK1;ENST00000476701.5_1_7:4169443-4308379:+|nuORF;nc|ENSG00000146555|Q7Z5N4-3|SDK1;SDK1|p.Q1487Pfs*37|1|0.27|ENSG00000146555|chr7:4149293-4149294|-/C|frameshift_variant;SDK1|p.V1762Wfs*2|1|0.28|ENSG00000146555|chr7:4208168-4208168|G/-|frameshift_variant	132.757866228626	0.013877640931359021	2				NaN	NaN	0	NaN	2602	2683	5284
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5288	18.22	NaN	15369	30	0	1313.4	0.106	+			6561	AYKKTSETL	9	76	520.7848417164533	1039.5551304997066	2	520.7848510742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AYKKTSETL_	ENSG00000076554|ENST00000518937|TPD52;ENST00000521354.5_1_8:80950353-81083761:-|nuORF;ENST00000522364.5_1_8:80963727-80992703:-|nuORF;nc|ENSG00000076554|P55327-2|TPD52;nc|ENSG00000076554|P55327-3|TPD52;nc|ENSG00000076554|P55327-5|TPD52;nc|ENSG00000076554|P55327-6|TPD52;nc|ENSG00000076554|P55327-7|TPD52;nc|ENSG00000076554|P55327|TPD52;TPD52|p.K164Sfs*5|1|0.09|ENSG00000076554|chr8:80051542-80051542|T/-|frameshift_variant	136.26810882979174	0.012230845423532208	2				NaN	NaN	0	NaN	2603	2683	5284
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5289	18.222	NaN	16880	30	0	1625.2	0.106			+	23635	LAQLYMWL	8	76	527.2756705424131	1052.536788151626	2	527.2758178710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_LAQLYM(Oxidation (M))WL_	REV__ENSG00000147874|ENST00000380502|HAUS6;REV__HAUS6|p.N492Mfs*50|1|0.4|ENSG00000147874|chr9:19063162-19063162|T/-|frameshift_variant;REV__HAUS6|p.S530Vfs*12|1|0.3|ENSG00000147874|chr9:19063049-19063049|T/-|frameshift_variant;REV__nc|ENSG00000147874|Q7Z4H7-2|HAUS6;REV__nc|ENSG00000147874|Q7Z4H7-3|HAUS6	74.51659920185547	0.36926395944126233	2				NaN	NaN	0	NaN	2604	2683	5284
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5290	18.224	NaN	13189	30	0	4651.2	0.106	+			42571	TASPPPPPK	9	65	446.2503293801283	890.4861058270566	2	446.2501525878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TASPPPPPK_	ENSG00000133226|ENST00000323848|SRRM1;nc|ENSG00000133226|Q8IYB3-2|SRRM1	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	2605	2683	5284
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5291	18.226	NaN	44011	30	0	14722	0.036	+			5317	ATVLTTERK	9	75	340.2010619495197	1017.5813564487592	3	340.201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATVLTTERK_	ENSG00000110107|ENST00000227524|PRPF19;PRPF19|p.S440Hfs*2|1|0.3|ENSG00000110107|chr11:60897945-60897945|A/-|frameshift_variant	34.172542307311794	0.4838870758800184	2				NaN	NaN	0	NaN	2606	2683	5284
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5292	18.226	NaN	4869.4	30	0	1155.5	0.14				-1	VVTCSLLAL	9	58	325.85744492796556	974.5505053840967	3	325.8575439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Carbamidomethyl (C)	_VVTC(Carbamidomethyl (C))SLLAL_	ENSG00000198862|ENST00000361371|LTN1;LTN1|p.F413Lfs*7|2|0.2|ENSG00000198862|chr21:28969538-28969538|A/-|frameshift_variant;LTN1|p.G1459Rfs*7|1|0.05|ENSG00000198862|chr21:28941327-28941328|-/T|frameshift_variant;LTN1|p.N656Ifs*11|2|0.28|ENSG00000198862|chr21:28966524-28966524|T/-|frameshift_variant;LTN1|p.S725Ifs*7|1|0.06|ENSG00000198862|chr21:28960696-28960697|-/ATGTTAAAAA|frameshift_variant;LTN1|p.T861Hfs*11|1|0.33|ENSG00000198862|chr21:28959470-28959470|T/-|frameshift_variant;LTN1|p.V1458Efs*10|1|0.05|ENSG00000198862|chr21:28941329-28941330|-/TATGCTT|frameshift_variant;nc|ENSG00000198862|O94822-2|LTN1;nc|ENSG00000198862|O94822-3|LTN1	20.94693142431847	0.6074874384046576	2				NaN	NaN	0	NaN	2607	2683	5284
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5310	18.263	NaN	66288	30	0	29012	0.214			+	45914	VAQLASLVKH	10	77	355.8850458747497	1064.6333082244491	3	355.8853454589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VAQLASLVKH_	REV__ENSG00000135744|ENST00000366667|AGT	61.691277971877994	0.35045824941635534	2				NaN	NaN	0	NaN	2622	2686	5309
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5311	18.267	NaN	17266	30	0	2626.9	0.106			+	20662	KGKTSNLV	8	62	423.756055670829	845.4975584084581	2	423.75567626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KGKTSNLV_	REV__tr|U7T3A9|U7T3A9_FUSNUElongationfactorGOS=FusobacteriumnucleatumCTI-5OX=1316586GN=fusAPE=3SV=1	66.42927471994793	0.4381325844043345	2				NaN	NaN	0	NaN	2623	2686	5309
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5312	18.269	NaN	43774	30	0	20192	0.106	+			32296	QTNRRKKR	8	78	543.8326470594814	1085.6507411857626	2	543.8355102539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QTNRRKKR_	ENSG00000092969|ENST00000366930|TGFB2;ENST00000479322.1_1_1:218607587-218614701:+|nuORF;nc|ENSG00000092969|P61812-2|TGFB2	64.20726635412375	0.4601301477144759	2				NaN	NaN	0	NaN	2624	2686	5309
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5313	18.271	NaN	13990	30	0	4289.7	0.106	+			42196	TAAEEELRQ	9	76	523.7569740116232	1045.4993950900464	2	523.7570190429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TAAEEELRQ_	ENSG00000151239|ENST00000395510|TWF1;nc|ENSG00000151239|Q12792-3|TWF1;nc|ENSG00000151239|Q12792-4|TWF1;TWF1|p.N209Mfs*4|1|0.19|ENSG00000151239|chr12:43797436-43797436|T/-|frameshift_variant	60.97194046774394	0.20551255781574032	2				NaN	NaN	0	NaN	2625	2686	5309
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5314	18.272	NaN	4817.4	30	0	1830.4	0.106	+			9485	EKRVDLIQ	8	62	334.1973563584789	999.5702396756367	3	334.1977844238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EKRVDLIQ_	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42|TTN;TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;TTN|p.D20259Rfs*40|1|0.44|ENSG00000155657|chr2:178583105-178583106|-/T|frameshift_variant;TTN|p.D21555Ifs*6|1|0.33|ENSG00000155657|chr2:178576659-178576659|G/-|frameshift_variant;TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;TTN|p.E20392Dfs*6|1|0.04|ENSG00000155657|chr2:178582357-178582358|-/TTTAAAATTA|frameshift_variant;TTN|p.E20392Kfs*4|1|0.02|ENSG00000155657|chr2:178582359-178582360|-/TTTT|frameshift_variant;TTN|p.G19920Afs*12|1|0.42|ENSG00000155657|chr2:178584961-178584961|G/-|frameshift_variant;TTN|p.G22029Efs*22|2|0.13|ENSG00000155657|chr2:178575125-178575125|T/-|frameshift_variant;TTN|p.I24998Nfs*2|1|0.35|ENSG00000155657|chr2:178566216-178566217|-/T|frameshift_variant;TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;TTN|p.K26626Nfs*34|1|0.34|ENSG00000155657|chr2:178561331-178561331|T/-|frameshift_variant;TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant;TTN|p.P22810Hfs*10|1|0.03|ENSG00000155657|chr2:178572780-178572781|-/AAAT|frameshift_variant;TTN|p.V22573Cfs*4|2|0.31|ENSG00000155657|chr2:178573492-178573492|C/-|frameshift_variant;TTN|p.V27442Cfs*4|1|0.05|ENSG00000155657|chr2:178558107-178558108|-/A|frameshift_variant	26.69291269510374	0.7532304684939817	2				NaN	NaN	0	NaN	2626	2686	5309
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5315	18.274	NaN	14906	30	0	2224.7	0.106			+	31368	QKDNRADGSI	10	79	552.2756877459892	1102.5368225587783	2	552.2760620117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QKDNRADGSI_	REV__ENST00000423384.5_1_12:7168629-7169817:+|nuORF	42.86426827375447	0.522752283233888	2				NaN	NaN	0	NaN	2627	2686	5309
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5316	18.276	NaN	44627	30	0	9105.7	0.033	+			16343	HEKVANGL	8	91	434.2378206812012	866.4610884292024	2	434.23773193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HEKVANGL_	ENSG00000125991|ENST00000348547|ERGIC3;ENST00000488384.1_1_20:34144716-34145272:+|nuORF;nc|ENSG00000125991|Q9Y282-3|ERGIC3	157.20854538584396	0.11940044182636066	2				NaN	NaN	0	NaN	2628	2686	5309
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5329	18.303	NaN	133690	30	0	50346	0.175	+			39116	SSTLESGT	8	81	391.1823457855615	780.350138637923	2	391.1822204589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSTLESGT_	ENSG00000166402|ENST00000299506|TUB;nc|ENSG00000166402|P50607-2|TUB	35.200714571348534	0.6875396545722289	2				NaN	NaN	0	NaN	2638	2689	5328
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5330	18.306	NaN	14146	30	0	1302.4	0.106	+			5807	AVIEHLKQK	9	77	533.3246437345149	1064.6347345358297	2	533.32470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVIEHLKQK_	BPTF|p.D2844Afs*20|1|0.08|ENSG00000171634|chr17:67959766-67959767|-/C|frameshift_variant;BPTF|p.K2718Nfs*36|3|0.12|ENSG00000171634|chr17:67948150-67948150|A/-|frameshift_variant;ENSG00000171634|ENST00000306378|BPTF;nc|ENSG00000171634|Q12830-4|BPTF;nc|ENSG00000171634|Q12830|BPTF	134.7655990226056	0.012935733000282069	2				NaN	NaN	0	NaN	2639	2689	5328
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5331	18.308	NaN	24388	30	0	3145.3	0.106	+			2673	AQNEPLTQK	9	84	514.7728108683486	1027.5310688034972	2	514.7724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AQNEPLTQK_	ENSG00000156304|ENST00000286835|SCAF4;ENST00000467731.1_1_21:33057290-33073360:-|nuORF;nc|ENSG00000156304|O95104-2|SCAF4;nc|ENSG00000156304|O95104-3|SCAF4;SCAF4|p.E653Qfs*24|1|0.4|ENSG00000156304|chr21:31688393-31688394|-/TG|frameshift_variant;SCAF4|p.V1113Cfs*7|1|0.22|ENSG00000156304|chr21:31671506-31671506|C/-|frameshift_variant	99.01295224348159	0.040209060045561164	2				NaN	NaN	0	NaN	2640	2689	5328
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5332	18.31	NaN	9714.4	30	0	3858.5	0.106			+	20124	KEKLLVKQQ	9	63	371.904392468301	1112.691348005103	3	371.90460205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEKLLVKQQ_	REV__ENSG00000163312|ENST00000295488|HELQ;REV__HELQ|p.E864Gfs*7|1|0.07|ENSG00000163312|chr4:83427648-83427649|-/GC|frameshift_variant;REV__HELQ|p.L795I|1|0.15|ENSG00000163312|chr4:83429659-83429659|G/T|missense_variant	60.11826168202944	0.21262886028301267	2				NaN	NaN	0	NaN	2641	2689	5328
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5333	18.312	NaN	10435	30	0	2169.1	0.106	+			19207	KAAEVLKVQK	10	74	557.353184374745	1112.6918158162898	2	557.3533935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KAAEVLKVQK_	ENSG00000112242|ENST00000346618|E2F3;nc|ENSG00000112242|O00716-2|E2F3	108.31271852315183	0.05301033373712667	2				NaN	NaN	0	NaN	2642	2689	5328
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5334	18.314	NaN	8125.1	30	0	1061.4	0.106	+			9640	ELRQIADVI	9	76	528.8064834352443	1055.5984139372886	2	528.8062133789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ELRQIADVI_	nc|ENSG00000166508|P33993-2|MCM7	54.776311868738084	0.25715957988447635	2				NaN	NaN	0	NaN	2643	2689	5328
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5335	18.315	NaN	4799.8	30	0	1377.6	0.036				-1	SAYMLVVMT	9	57	344.16970914359354	1029.4872980309806	3	344.1697692871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_SAYMLVVM(Oxidation (M))T_	AVPR1A|p.F351Lfs*19|4|0.28|ENSG00000166148|chr12:63147563-63147563|A/-|frameshift_variant;ENSG00000166148|ENST00000299178|AVPR1A	24.519189625965996	0.574102787014149	2				NaN	NaN	0	NaN	2644	2689	5328
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5350	18.347	NaN	136740	30	0	17398	0.16	+			8875	EERRVKEVV	9	66	381.88756430032123	1142.6408635011637	3	381.8875427246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EERRVKEVV_	ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88813329-88813827:+|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	2656	2692	5349
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5351	18.35	NaN	28988	30	0	6206.7	0.106	+			49095	VVLENAAKK	9	82	486.2977901254792	970.5810273177584	2	486.2976379394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVLENAAKK_	ENSG00000171824|ENST00000376936|EXOSC10;ENST00000474216.5_1_1:11126777-11137033:-|nuORF;nc|ENSG00000171824|Q01780-2|EXOSC10	141.52041321563706	0.009766778904176347	2				NaN	NaN	0	NaN	2657	2692	5349
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5352	18.352	NaN	64445	30	0	18455	0.106	+			49302	VVQRVEIHK	9	95	554.3354674998108	1106.6563820664214	2	554.3357543945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVQRVEIHK_	ENSG00000213977|ENST00000225525|TAX1BP3	112.41091882917199	0.026537921851008135	2				NaN	NaN	0	NaN	2658	2692	5349
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5353	18.354	NaN	116180	30	0	12179	0.106			+	21111	KKRGFVQVS	9	105	524.8167001600427	1047.6188473868854	2	524.8169555664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KKRGFVQVS_	REV__ENSG00000105193|ENST00000251453|RPS16;REV__ENST00000469078.5_1_19:20235852-20236290:+|nuORF;REV__ENST00000601390.1_1_19:39926180-39926535:-|nuORF	93.1432384553994	0.056003526918089595	2				NaN	NaN	0	NaN	2659	2692	5349
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5354	18.355	NaN	18192	30	0	1902.7	0.106	+			40412	STVGSAISRK	10	95	503.2879920071237	NaN	0	503.2879333496094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STVGSAISRK_	ENSG00000101150|ENST00000346249|TPD52L2;nc|ENSG00000101150|O43399-2|TPD52L2;nc|ENSG00000101150|O43399-3|TPD52L2;nc|ENSG00000101150|O43399-4|TPD52L2;nc|ENSG00000101150|O43399-5|TPD52L2;nc|ENSG00000101150|O43399-6|TPD52L2;nc|ENSG00000101150|O43399-7|TPD52L2	91.26522074875469	0.04908179266484229	2				NaN	NaN	0	NaN	2660	2692	5349
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5355	18.357	NaN	53887	30	0	9676.4	0.106	+			683	AEAKKIERL	9	100	529.3220893923237	1056.6296258514474	2	529.3220825195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEAKKIERL_	ENSG00000183520|ENST00000373014|UTP11;ENST00000488453.1_1_1:38483328-38489297:+|nuORF;nc|ENSG00000183520|Q9Y3A2-2|UTP11	129.42129120953632	0.01549634589885217	2				NaN	NaN	0	NaN	2661	2692	5349
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5356	18.359	NaN	48776	30	0	12164	0.037			+	30290	PTKRLDIHK	9	76	369.89260856022173	NaN	0	369.8926086425781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PTKRLDIHK_	REV__ENSG00000197818|ENST00000361573|SLC9A8;REV__nc|ENSG00000197818|Q9Y2E8-2|SLC9A8;REV__SLC9A8|p.P341Qfs*46|1|0.09|ENSG00000197818|chr20:49874765-49874765|C/-|frameshift_variant	56.72105179125745	0.16330365735109603	2				NaN	NaN	0	NaN	2662	2692	5349
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5373	18.394	NaN	112340	30	0	14842	0.149	+			48156	VSYSHIQSK	9	81	524.7747753005251	1047.5349976678501	2	524.7747192382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSYSHIQSK_	ENSG00000047849|ENST00000683076|MAP4;nc|ENSG00000047849|P27816-2|MAP4;nc|ENSG00000047849|P27816-4|MAP4;nc|ENSG00000047849|P27816-6|MAP4;nc|ENSG00000047849|P27816|MAP4	168.25843898104137	0.0030641937004078144	2				NaN	NaN	0	NaN	2676	2695	5372
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5374	18.396	NaN	22897	30	0	5887.8	0.106	+			48157	VSYSHIQSK	9	83	350.1853789812967	1047.53430754409	3	350.185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSYSHIQSK_	ENSG00000047849|ENST00000683076|MAP4;nc|ENSG00000047849|P27816-2|MAP4;nc|ENSG00000047849|P27816-4|MAP4;nc|ENSG00000047849|P27816-6|MAP4;nc|ENSG00000047849|P27816|MAP4	31.529811441608018	0.5085848003137583	2				NaN	NaN	0	NaN	2677	2695	5372
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5375	18.399	NaN	48175	30	0	14114	0.106	+			40725	SVCGKSFSR	9	97	514.2532228169562	1026.4918927007122	2	514.2531127929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SVC(Carbamidomethyl (C))GKSFSR_	ENSG00000278129|ENST00000621650|ZNF8	94.4091291819064	0.0524345700464502	2				NaN	NaN	0	NaN	2678	2695	5372
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5376	18.4	NaN	12328	30	0	1596.8	0.106	+			38366	SRRRGAPR	8	70	478.2875478249236	NaN	0	478.28753662109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SRRRGAPR_	ENST00000454337.1_1_16:1697048-1706838:+|nuORF	73.97473282117947	1.7418937515398478	2				NaN	NaN	0	NaN	2679	2695	5372
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5377	18.402	NaN	19390	30	0	12229	0.106			+	-1	QCPLIARCH	9	62	549.2714950194458	1096.5284371056914	2	549.2720947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_QC(Carbamidomethyl (C))PLIARCH_	REV__ENSG00000111144|ENST00000228740|LTA4H;REV__ENST00000548852.5_1_12:96397735-96429337:-|nuORF;REV__ENST00000553041.5_1_12:96414526-96429297:-|nuORF;REV__nc|ENSG00000111144|P09960-2|LTA4H;REV__nc|ENSG00000111144|P09960-3|LTA4H;REV__nc|ENSG00000111144|P09960-4|LTA4H	24.20275056022122	0.577060078256802	2				NaN	NaN	0	NaN	2680	2695	5372
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5378	18.404	NaN	10530	30	0	2204.6	0.106			+	34009	RSILTVSH	8	65	456.7666257811836	911.5186986291673	2	456.766357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RSILTVSH_	REV__ABCD2|p.A113T|1|0.4|ENSG00000173208|chr12:39619279-39619279|C/T|missense_variant	53.351449002276354	0.5676011784961348	2				NaN	NaN	0	NaN	2681	2695	5372
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5379	18.406	NaN	7569.1	30	0	1558.1	0.036			+	8810	EELCPLGPQS	10	71	536.7542631298907	1071.4939733265812	2	536.754150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EELCPLGPQS_	REV__ENST00000594090.5_1_19:50491627-50519408:-|nuORF	71.87747018426188	0.26198133118427214	2				NaN	NaN	0	NaN	2682	2695	5372
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5395	18.439	NaN	98824	30	0	24580	0.177	+			28888	NQGNWSEQN	9	94	538.7235252024172	1075.4324974716344	2	538.7235717773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NQGNWSEQN_	ENSG00000106772|ENST00000376718|PRUNE2;nc|ENSG00000106772|Q8WUY3-2|PRUNE2;nc|ENSG00000106772|Q8WUY3-3|PRUNE2;nc|ENSG00000106772|Q8WUY3-4|PRUNE2;PRUNE2|p.L2591Qfs*12|1|0.19|ENSG00000106772|chr9:76703839-76703842|CTAA/-|frameshift_variant	62.107414245175825	0.1960472003779324	2				NaN	NaN	0	NaN	2695	2698	5394
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5396	18.442	NaN	88510	30	0	6791.2	0.106	+			49541	VYAQKHQQL	9	107	557.803851896007	1113.593150858814	2	557.8043823242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYAQKHQQL_	ENSG00000197323|ENST00000358465|TRIM33;nc|ENSG00000197323|Q9UPN9-2|TRIM33;TRIM33|p.L700Efs*5|1|0.07|ENSG00000197323|chr1:114410281-114410282|-/CAGAATTCTCC|frameshift_variant	190.51785368661015	0.00024017880420896124	2				NaN	NaN	0	NaN	2696	2698	5394
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5397	18.444	NaN	125700	30	0	38200	0.106	+			5136	ATSTGGIVNK	10	89	474.2613580315259	946.5081631298518	2	474.2614440917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATSTGGIVNK_	ENSG00000162174|ENST00000415229|ASRGL1;ENST00000534183.5_1_11:62105600-62156860:+|nuORF;nc|ENSG00000162174|Q7L266-2|ASRGL1	167.22876102047192	0.004566578872041589	2				NaN	NaN	0	NaN	2697	2698	5394
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5398	18.446	NaN	48088	30	0	7560.8	0.106	+			13778	GQGVNNVPK	9	90	456.74855419096014	911.4825554487203	2	456.7484130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GQGVNNVPK_	ENSG00000179119|ENST00000336349|SPTY2D1;ENST00000536336.5_1_11:18633859-18655855:-|nuORF;nc|ENSG00000179119|Q68D10-2|SPTY2D1;nc|ENSG00000179119|Q68D10-3|SPTY2D1;SPTY2D1|p.P485Rfs*12|1|0.3|ENSG00000179119|chr11:18614820-18614820|G/-|frameshift_variant	116.90359126533652	0.02307425081617795	2				NaN	NaN	0	NaN	2698	2698	5394
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5399	18.448	NaN	10203	30	0	1645.9	0.106				-1	RKSCGPPPE	9	78	343.17092593843796	1026.490948415514	3	343.1711120605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_RKSC(Carbamidomethyl (C))GPPPE_	CR1|p.P1583Lfs*44|1|0.22|ENSG00000203710|chr1:207609487-207609487|C/-|frameshift_variant;ENSG00000203710|ENST00000367049|CR1;nc|ENSG00000203710|P17927|CR1	31.529811441608018	0.5085848003137583	2				NaN	NaN	0	NaN	2699	2698	5394
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5400	18.45	NaN	3886.8	30	0	707.43	0.106			+	-1	GVCMSIIG	8	48	398.19029087587745	794.3660288185549	2	398.19024658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_GVCM(Oxidation (M))SIIG_	REV__ENST00000246151.8_1_1:24114517-24114568:+|nuORF	28.2542754592877	0.7411748056684583	2				NaN	NaN	0	NaN	2700	2698	5394
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5401	18.451	NaN	11209	30	0	2937	0.036	+			24793	LIIPPEPRQ	9	67	354.88152295461475	1061.6227394640443	3	354.88177490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LIIPPEPRQ_	ENST00000396009.7_1_20:50140121-50140241:-|nuORF	31.954861631926434	0.5046124803899898	2				NaN	NaN	0	NaN	2701	2698	5394
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5414	18.478	NaN	16515	30	0	7377	0.214			+	24677	LGWIRIVVM	9	70	362.8885111229463	1085.6437039690388	3	362.8885803222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LGWIRIVVM_	REV__ENSG00000175221|ENST00000325464|MED16;REV__nc|ENSG00000175221|Q9Y2X0-2|MED16;REV__nc|ENSG00000175221|Q9Y2X0-3|MED16	39.021493756699265	0.43173687394350213	2				NaN	NaN	0	NaN	2711	2701	5413
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5415	18.482	NaN	18268	30	0	3461	0.106	+			10104	ESLLWKVLV	9	84	543.8326470594814	1085.6507411857626	2	543.8294677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ESLLWKVLV_	ENSG00000043514|ENST00000316891|TRIT1;ENST00000462243.2_1_1:40318401-40323020:-|nuORF;ENST00000486825.6_1_1:40315918-40341739:-|nuORF;nc|ENSG00000043514|Q9H3H1-4|TRIT1;TRIT1|p.L334*|1|0.3|ENSG00000043514|chr1:39847225-39847225|A/-|frameshift_variant	72.87924865735499	0.12833875048249987	2				NaN	NaN	0	NaN	2712	2701	5413
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5416	18.484	NaN	11783	30	0	3041.9	0.106	+			4172	ATFKLEKNK	9	75	360.21317620820594	1077.617699224818	3	360.2132568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATFKLEKNK_	DHX29|p.D780Tfs*15|1|0.32|ENSG00000067248|chr5:55276356-55276356|T/-|frameshift_variant;DHX29|p.I805Nfs*17|1|0.27|ENSG00000067248|chr5:55276281-55276282|-/C|frameshift_variant;DHX29|p.K807Nfs*16|1|0.19|ENSG00000067248|chr5:55276272-55276272|T/-|frameshift_variant;ENSG00000067248|ENST00000251636|DHX29;ENST00000504778.5_1_5:54579003-54603452:-|nuORF	65.15724298150197	0.17062369902793603	2				NaN	NaN	0	NaN	2713	2701	5413
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5417	18.486	NaN	8332.7	30	0	975.44	0.106	+			2257	ALVATPGKK	9	59	442.78185335721145	883.5491537812229	2	442.7815856933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ALVATPGKK_	ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232323706-232327997:-|nuORF	116.90359126533652	0.02307425081617795	2				NaN	NaN	0	NaN	2714	2701	5413
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5418	18.487	NaN	10444	30	0	2422	0.106				-1	QKANLNMH	8	65	486.24078533368345	970.4670177341669	2	486.2403564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_QKANLNM(Oxidation (M))H_	ENSG00000204859|ENST00000377674|ZBTB48;ENST00000498342.5_1_1:6647219-6648294:+|nuORF;ZBTB48|p.R485H|1|0.12|ENSG00000204859|chr1:6588134-6588134|G/A|missense_variant	35.200714571348534	0.6875396545722289	2				NaN	NaN	0	NaN	2715	2701	5413
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5419	18.489	NaN	10132	30	0	2546.8	0.106	+			29756	PHSPVASG	8	52	376.1902143640721	750.3658757949443	2	376.1902770996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PHSPVASG_	ENST00000411463.2_2_8:23146028-23146572:+|nuORF	44.53106598305862	0.628196326904373	2				NaN	NaN	0	NaN	2716	2701	5413
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5420	18.491	NaN	6015	30	0	1461.9	0.036			+	9257	EGVRCEDMD	9	54	527.2038008250337	1052.3930487168673	2	527.2039184570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EGVRCEDMD_	REV__NOTCH3|p.V159M|1|0.26|ENSG00000074181|chr19:15192164-15192164|C/T|missense_variant	21.9598887501803	0.5980208138527809	2				NaN	NaN	0	NaN	2717	2701	5413
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5436	18.524	NaN	30495	30	0	15853	0.214	+			5908	AVLDKVKTK	9	77	334.550144188397	1000.628603165391	3	334.5499572753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVLDKVKTK_	ENSG00000051382|ENST00000674063|PIK3CB;PIK3CB|p.T930Lfs*62|1|0.47|ENSG00000051382|chr3:138663914-138663914|T/-|frameshift_variant	52.936696900407355	0.27249468807391813	2				NaN	NaN	0	NaN	2730	2704	5435
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5437	18.527	NaN	12504	30	0	3593.2	0.106	+			4173	ATFKLEKNK	9	78	539.8167755130462	1077.6189980928923	2	539.8169555664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATFKLEKNK_	DHX29|p.D780Tfs*15|1|0.32|ENSG00000067248|chr5:55276356-55276356|T/-|frameshift_variant;DHX29|p.I805Nfs*17|1|0.27|ENSG00000067248|chr5:55276281-55276282|-/C|frameshift_variant;DHX29|p.K807Nfs*16|1|0.19|ENSG00000067248|chr5:55276272-55276272|T/-|frameshift_variant;ENSG00000067248|ENST00000251636|DHX29;ENST00000504778.5_1_5:54579003-54603452:-|nuORF	104.42354056486148	0.0346881550498418	2				NaN	NaN	0	NaN	2731	2704	5435
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5438	18.529	NaN	17472	30	0	4388.4	0.106	+			5909	AVLDKVKTK	9	77	501.3214587628694	1000.6283645925388	2	501.32147216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVLDKVKTK_	ENSG00000051382|ENST00000674063|PIK3CB;PIK3CB|p.T930Lfs*62|1|0.47|ENSG00000051382|chr3:138663914-138663914|T/-|frameshift_variant	168.25843898104137	0.0030641937004078144	2				NaN	NaN	0	NaN	2732	2704	5435
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5439	18.531	NaN	10361	30	0	2575.7	0.106	+			4227	ATGDLATSR	9	60	446.23010440040383	890.4456558676077	2	446.2301025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATGDLATSR_	ENSG00000167642|ENST00000301244|SPINT2;ENST00000590210.1_1_19:38755508-38778604:+|nuORF;nc|ENSG00000167642|O43291-2|SPINT2	126.24258497203832	0.01742065577488747	2				NaN	NaN	0	NaN	2733	2704	5435
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5440	18.533	NaN	11196	30	0	1957	0.106	+			4042	ATDDYHYEK	9	75	571.2436509347743	1140.4727489363486	2	571.244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATDDYHYEK_	ENSG00000136819|ENST00000372447|C9orf78	109.47833844074708	0.029530294723441826	2				NaN	NaN	0	NaN	2734	2704	5435
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5441	18.535	NaN	8806.4	30	0	1077.2	0.035	+			13771	GQGSYFAKK	9	75	493.258836879258	984.503120825316	2	493.25872802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GQGSYFAKK_	ENSG00000163659|ENST00000295924|TIPARP	93.19546047674547	0.05585629608842056	2				NaN	NaN	0	NaN	2735	2704	5435
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5442	18.535	NaN	7419.6	30	0	1022.4	0.14			+	44405	TSLPLFCIL	9	67	503.7874821389092	1005.5604113446184	2	503.78741455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TSLPLFCIL_	REV__ENST00000578804.5_2_17:62499940-62500153:-|nuORF	52.29916861842294	0.2778091507991977	2				NaN	NaN	0	NaN	2736	2704	5435
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5455	18.565	NaN	60561	30	0	41099	0.214	+			32427	QVIAGAVHK	9	77	461.7771308782638	921.5397088233276	2	461.77679443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QVIAGAVHK_	ENSG00000165943|ENST00000298894|MOAP1	138.8255168832474	0.011031062795199845	2				NaN	NaN	0	NaN	2746	2707	5454
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5456	18.569	NaN	14063	30	0	1345.5	0.106	+			39362	STCQRFVEK	9	74	577.7848696172102	1153.5551863012204	2	577.7850341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_STC(Carbamidomethyl (C))QRFVEK_	ENSG00000181610|ENST00000313608|MRPS23	117.81106730687013	0.02252488733980868	2				NaN	NaN	0	NaN	2747	2707	5454
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5457	18.571	NaN	11321	30	0	2914.5	0.106	+			13089	GFVKVVKNK	9	72	340.21814787222763	1017.632614216883	3	340.2182922363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GFVKVVKNK_	ENSG00000122406|ENST00000370321|RPL5	27.882242232435846	0.5426732730940306	2				NaN	NaN	0	NaN	2748	2707	5454
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5458	18.573	NaN	7147.2	30	0	1137.1	0.106	+			15435	GTYSIGKEK	9	68	491.76404525445633	981.5135375757127	2	491.7637023925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTYSIGKEK_	DCLRE1A|p.V898Wfs*37|1|0.34|ENSG00000198924|chr10:113841535-113841535|T/-|frameshift_variant;ENSG00000198924|ENST00000361384|DCLRE1A	85.86182877749512	0.07653218437724067	2				NaN	NaN	0	NaN	2749	2707	5454
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5459	18.574	NaN	13439	30	0	2060.8	0.106			+	31295	QIFSGLANVI	10	83	531.3017934817252	1060.5890340302503	2	531.3018188476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QIFSGLANVI_	REV__ENSG00000061987|ENST00000393630|MON2;REV__ENST00000547095.5_1_12:62864501-62986526:+|nuORF;REV__MON2|p.A1027Vfs*94|1|0.03|ENSG00000061987|chr12:62553043-62553044|-/TTCTTTTT|frameshift_variant;REV__MON2|p.E989Nfs*2|1|0.16|ENSG00000061987|chr12:62552924-62552924|A/-|frameshift_variant;REV__MON2|p.T1274Qfs*3|1|0.36|ENSG00000061987|chr12:62560894-62560894|T/-|frameshift_variant;REV__MON2|p.V1435Afs*17|1|0.03|ENSG00000061987|chr12:62566430-62566431|-/CATCT|frameshift_variant;REV__nc|ENSG00000061987|Q7Z3U7-2|MON2;REV__nc|ENSG00000061987|Q7Z3U7-5|MON2;REV__nc|ENSG00000061987|Q7Z3U7-6|MON2	69.6276240434122	0.2803623802747859	2				NaN	NaN	0	NaN	2750	2707	5454
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5460	18.576	NaN	9724.6	30	0	2146.3	0.106	+			13090	GFVKVVKNK	9	76	509.823997041248	1017.633441149296	2	509.82403564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GFVKVVKNK_	ENSG00000122406|ENST00000370321|RPL5	94.00642277110589	0.05356993013874309	2				NaN	NaN	0	NaN	2751	2707	5454
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5461	18.578	NaN	14987	30	0	3277.9	0.032	+			45906	VAQGGGRAL	9	66	414.7381277831336	827.4617026330673	2	414.7377624511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VAQGGGRAL_	ENSG00000140553|ENST00000418476|UNC45A;ENST00000487875.5_1_15:91491769-91496943:+|nuORF;nc|ENSG00000140553|Q9H3U1-2|UNC45A	102.7733458925114	0.03637199559902695	2				NaN	NaN	0	NaN	2752	2707	5454
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5474	18.606	NaN	10823	30	0	2137.7	0.214	+			34929	SAAGHVLVK	9	75	441.2637898364986	880.5130267397972	2	441.2635803222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAAGHVLVK_	ENSG00000183508|ENST00000369448|TENT5C	122.1759843771914	0.019882474861609503	2				NaN	NaN	0	NaN	2762	2710	5473
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5475	18.609	NaN	6172.3	30	0	561.11	0.106	+			16532	HEVKKVTL	8	66	477.2923884226882	952.5702239121764	2	477.2922058105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HEVKKVTL_	ENSG00000100813|ENST00000605057|ACIN1;nc|ENSG00000100813|Q9UKV3-2|ACIN1;nc|ENSG00000100813|Q9UKV3-3|ACIN1;nc|ENSG00000100813|Q9UKV3-5|ACIN1;nc|ENSG00000100813|Q9UKV3|ACIN1	76.7741389293348	0.3504530765139327	2				NaN	NaN	0	NaN	2763	2710	5473
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5476	18.611	NaN	8534.7	30	0	1074.4	0.106			+	-1	CRPPTPPVTEG	11	67	626.8037857158554	1251.5930184985107	2	626.8043212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))C(Carbamidomethyl (C))RPPTPPVTEG_	REV__VPS9D1|p.D67Tfs*6|1|0.53|ENSG00000075399|chr16:89716800-89716800|G/-|frameshift_variant	36.446750945000026	0.6065623449959539	2				NaN	NaN	0	NaN	2764	2710	5473
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5477	18.613	NaN	9761.4	30	0	1876.2	0.106	+			15160	GTSGELSVKEK	11	79	567.8042589356779	1133.5939649381558	2	567.8040771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTSGELSVKEK_	ENSG00000173517|ENST00000682557|PEAK1;PEAK1|p.F1319Lfs*11|1|0.37|ENSG00000173517|chr15:77133125-77133125|A/-|frameshift_variant;PEAK1|p.N1433Tfs*19|1|0.1|ENSG00000173517|chr15:77115099-77115099|T/-|frameshift_variant;PEAK1|p.Q863Kfs*186|1|0.48|ENSG00000173517|chr15:77179340-77179340|G/-|frameshift_variant	99.78786539795823	0.061125669442822994	2				NaN	NaN	0	NaN	2765	2710	5473
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5478	18.615	NaN	5372.7	30	0	1077.4	0.106			+	22334	KTGAAGSSAR	10	58	453.2429202561724	904.4712875791448	2	453.2426452636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KTGAAGSSAR_	REV__ENST00000561933.1_1_16:68344571-68344829:-|nuORF	24.231819034082204	0.6819444564287812	2				NaN	NaN	0	NaN	2766	2710	5473
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5479	18.617	NaN	9627.1	30	0	2451.3	0.106	+			22843	KVIEPKDIHAK	11	72	426.5908510703457	1276.750723811237	3	426.5906066894531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KVIEPKDIHAK_	ENSG00000143416|ENST00000368868|SELENBP1;ENST00000455839.5_1_1:151339298-151341653:-|nuORF;ENST00000474352.5_1_1:151338696-151341653:-|nuORF;ENST00000492643.5_1_1:151339689-151341653:-|nuORF;nc|ENSG00000143416|Q13228-2|SELENBP1;nc|ENSG00000143416|Q13228-4|SELENBP1	95.4829727501206	0.07632891873484633	2				NaN	NaN	0	NaN	2767	2710	5473
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5480	18.619	NaN	8868.9	30	0	1697.1	0.035	+			48632	VTSKVLTTK	9	71	488.80568875310075	975.5968245730015	2	488.8051452636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VTSKVLTTK_	ENSG00000167632|ENST00000438773|TRAPPC9;ENST00000521667.5_1_8:140743306-141301208:-|nuORF;nc|ENSG00000167632|Q96Q05-2|TRAPPC9;nc|ENSG00000167632|Q96Q05-3|TRAPPC9	112.10723106719422	0.02684780151337622	2				NaN	NaN	0	NaN	2768	2710	5473
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5494	18.648	NaN	107030	30	0	20333	0.205	+			48592	VTQSEIAQK	9	98	502.27482441603564	1002.5350958988713	2	502.274658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTQSEIAQK_	ENSG00000197702|ENST00000334956|PARVA;ENST00000533345.5_1_11:12419899-12534890:+|nuORF	197.79262163027192	4.265587581223485E-05	2				NaN	NaN	0	NaN	2779	2713	5493
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5495	18.651	NaN	35728	30	0	5519.5	0.106	+			4269	ATGGLEGKMK	10	97	496.2659446070937	990.5173362809874	2	496.2659606933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATGGLEGKMK_	AHNAK|p.I657Nfs*25|1|0.36|ENSG00000124942|chr11:62532447-62532448|-/T|frameshift_variant;AHNAK|p.K2311Rfs*11|1|0.33|ENSG00000124942|chr11:62527487-62527487|G/-|frameshift_variant;AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;AHNAK|p.L2124Ifs*37|1|0.04|ENSG00000124942|chr11:62528048-62528049|-/ATGCCTGATA|frameshift_variant;AHNAK|p.S1888Qfs*8|1|0.11|ENSG00000124942|chr11:62528755-62528756|-/G|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK	148.6902309647307	0.008728094565931875	2				NaN	NaN	0	NaN	2780	2713	5493
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5496	18.654	NaN	45860	30	0	7181.1	0.106	+			46800	VHWNGRVHR	9	93	580.8126092979402	1159.6106656626803	2	580.8126831054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VHWNGRVHR_	ENSG00000179715|ENST00000546455|PCED1B	52.936696900407355	0.27249468807391813	2				NaN	NaN	0	NaN	2781	2713	5493
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5497	18.655	NaN	19894	30	0	5936.9	0.106	+			39909	STLTYRMTK	9	80	558.7895482772801	1115.5645436213601	2	558.7901611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_STLTYRM(Oxidation (M))TK_	ENST00000446662.5_1_16:22466144-22470768:+|nuORF;ENST00000522841.6_1_16:21490806-21495758:-|nuORF	172.24860141594272	0.002383092361811508	2				NaN	NaN	0	NaN	2782	2713	5493
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5498	18.657	NaN	7827.6	30	0	932.57	0.106	+			14304	GSYESTLKK	9	64	506.7693079273849	1011.5240629215698	2	506.769287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GSYESTLKK_	ENSG00000184898|ENST00000331426|RBM43	79.71258880314673	0.09879134589249085	2				NaN	NaN	0	NaN	2783	2713	5493
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5499	18.659	NaN	5163	30	0	1051.3	0.033	+			14398	GTALVGSQK	9	54	430.74559944091556	859.4766459486311	2	430.7454833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTALVGSQK_	ENSG00000137309|ENST00000311487|HMGA1;ENST00000430198.2_1_4:73964637-73964859:+|nuORF;nc|ENSG00000137309|P17096-3|HMGA1	145.15565482312357	0.00806134135205793	2				NaN	NaN	0	NaN	2784	2713	5493
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5500	18.66	NaN	6733.9	30	0	2279.4	0.141	+			18943	IVNRGITPK	9	57	333.2098200900967	996.6076308704901	3	333.2099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IVNRGITPK_	ENSG00000135241|ENST00000257694|PNPLA8;nc|ENSG00000135241|Q9NP80-3|PNPLA8;PNPLA8|p.T757Qfs*10|1|0.38|ENSG00000135241|chr7:108472481-108472481|T/-|frameshift_variant	54.722347961057174	0.257609425301511	2				NaN	NaN	0	NaN	2785	2713	5493
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5513	18.688	NaN	12114	30	0	1157.5	0.214	+			23351	KYTPPPHHI	9	75	545.2958512322125	1088.577149531225	2	545.2958374023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KYTPPPHHI_	ENSG00000168653|ENST00000372969|NDUFS5	107.00750918261382	0.032051501805654005	2				NaN	NaN	0	NaN	2795	2716	5512
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5514	18.692	NaN	11732	30	0	1611.6	0.106	+			37600	SLPPPIIQPM	10	76	364.87688458050724	NaN	0	364.876953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLPPPIIQPM_	AFF2|p.K978Rfs*65|1|0.46|ENSG00000155966|chrX:148966804-148966804|A/-|frameshift_variant;AFF2|p.Q1237Pfs*15|1|0.14|ENSG00000155966|chrX:148987448-148987449|-/C|frameshift_variant;ENSG00000155966|ENST00000370460|AFF2;nc|ENSG00000155966|P51816-2|AFF2;nc|ENSG00000155966|P51816-3|AFF2;nc|ENSG00000155966|P51816-5|AFF2;nc|ENSG00000155966|P51816-6|AFF2;nc|ENSG00000155966|P51816-7|AFF2	41.42661286455405	0.3598046802465243	2				NaN	NaN	0	NaN	2796	2716	5512
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5515	18.694	NaN	9814.5	30	0	1612.7	0.106	+			14119	GSLPGDKIRNK	11	73	592.8413591933655	1183.668165453531	2	592.8416137695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GSLPGDKIRNK_	ENSG00000183530|ENST00000327423|PRR14L;nc|ENSG00000183530|Q5THK1-2|PRR14L;nc|ENSG00000183530|Q5THK1-3|PRR14L;nc|ENSG00000183530|Q5THK1-4|PRR14L;PRR14L|p.L1550*|1|0.31|ENSG00000183530|chr22:31713190-31713190|A/-|frameshift_variant	65.69465075029274	0.27262252711350304	2				NaN	NaN	0	NaN	2797	2716	5512
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5516	18.696	NaN	3864.6	30	0	993.78	0.106	+			1844	AIKAIKKMGY	10	47	374.89480013231315	1121.6625709971395	3	374.89508056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AIKAIKKMGY_	tr|U7SYC5|U7SYC5_FUSNUCarbamoylphosphatesynthaselargechainOS=FusobacteriumnucleatumCTI-5OX=1316586GN=carBPE=3SV=1	29.170058357718403	0.6416167986984785	2				NaN	NaN	0	NaN	2798	2716	5512
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5517	18.698	NaN	9051.2	30	0	884.81	0.106	+			40814	SVEEGEKVVK	10	77	552.3010665632927	1102.5875801933853	2	552.3013916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVEEGEKVVK_	ENSG00000133835|ENST00000510025|HSD17B4;ENST00000511186.5_1_5:118788168-118811542:+|nuORF;ENST00000515235.6_1_5:118788237-118827866:+|nuORF;HSD17B4|p.L703Ifs*15|1|0.06|ENSG00000133835|chr5:119536530-119536531|-/GAAAAATA|frameshift_variant;nc|ENSG00000133835|P51659-2|HSD17B4;nc|ENSG00000133835|P51659-3|HSD17B4	123.20810148215591	0.02279876478776198	2				NaN	NaN	0	NaN	2799	2716	5512
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5518	18.699	NaN	9101.5	30	0	4160.6	0.106	+			12581	GEHAVVHGKVA	11	52	368.5361760665053	1102.5866987997158	3	368.5362548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GEHAVVHGKVA_	ENSG00000110921|ENST00000228510|MVK;MVK|p.A141Rfs*18|15|0.33|ENSG00000110921|chr12:109581435-109581435|C/-|frameshift_variant	26.69291269510374	0.70980431218767	2				NaN	NaN	0	NaN	2800	2716	5512
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5519	18.701	NaN	6462.9	30	0	862.28	0.037	+			2172	ALMEKFKKK	9	71	561.8381434708255	1121.6617340084508	2	561.8390502929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ALMEKFKKK_	ENSG00000145779|ENST00000504771|TNFAIP8;ENST00000415806.2_1_5:118727135-118729073:+|nuORF;nc|ENSG00000145779|O95379-2|TNFAIP8;nc|ENSG00000145779|O95379-3|TNFAIP8;nc|ENSG00000145779|O95379-4|TNFAIP8	63.53385203322761	0.18415635464017938	2				NaN	NaN	0	NaN	2801	2716	5512
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5531	18.727	NaN	29446	30	0	5957.9	0.214	+			23352	KYTPPPHHI	9	83	363.8660346447369	1088.5762745344107	3	363.8662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KYTPPPHHI_	ENSG00000168653|ENST00000372969|NDUFS5	98.62937762414208	0.04060045538121712	2				NaN	NaN	0	NaN	2810	2719	5530
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5532	18.731	NaN	18270	30	0	6010.6	0.106	+			19507	KAVCCVPT	8	65	467.72760507251934	933.4406572118387	2	467.72772216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_KAVC(Carbamidomethyl (C))C(Carbamidomethyl (C))VPT_	ENSG00000205445|ENST00000391621|KRTAP10-2	47.91560031466742	0.6071945918984287	2				NaN	NaN	0	NaN	2811	2719	5530
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5533	18.733	NaN	11638	30	0	5529.5	0.106				-1	 	0	58	334.76399445406145	667.5134359749229	2	334.76409912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2812	2719	5530
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5534	18.735	NaN	16714	30	0	3149.2	0.106			+	3659	ASYIKEKGK	9	69	341.8657263052313	1022.575349515894	3	341.8656921386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASYIKEKGK_	REV__ENSG00000198431|ENST00000525566|TXNRD1;REV__ENST00000524698.5_2_12:104681148-104742190:+|nuORF;REV__ENST00000525566.5_2_12:104609571-104742190:+|nuORF;REV__ENST00000526390.5_1_12:104683270-104742190:+|nuORF;REV__ENST00000526691.5_1_12:104680955-104742190:+|nuORF;REV__ENST00000526950.1_1_12:104703637-104742190:+|nuORF;REV__ENST00000529546.5_1_12:104682722-104742190:+|nuORF;REV__nc|ENSG00000198431|Q16881-2|TXNRD1;REV__nc|ENSG00000198431|Q16881-3|TXNRD1;REV__nc|ENSG00000198431|Q16881-4|TXNRD1;REV__nc|ENSG00000198431|Q16881-5|TXNRD1;REV__nc|ENSG00000198431|Q16881-6|TXNRD1;REV__nc|ENSG00000198431|Q16881-7|TXNRD1	35.15202426646627	0.4747332964206883	2				NaN	NaN	0	NaN	2813	2719	5530
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5535	18.737	NaN	17205	30	0	3117.4	0.106	+			3335	ASMPDNTAAQK	11	73	567.2665479764584	1132.5185430197166	2	567.266845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASMPDNTAAQK_	ENSG00000100345|ENST00000216181|MYH9;ENSG00000133392|ENST00000300036|MYH11;MYH9|p.I784*|1|0.07|ENSG00000100345|chr22:36304036-36304036|G/-|frameshift_variant;nc|ENSG00000100345|P35579-2|MYH9;nc|ENSG00000133392|P35749-2|MYH11;nc|ENSG00000133392|P35749-3|MYH11;nc|ENSG00000133392|P35749-4|MYH11	90.14881205920913	0.09816545110109878	2				NaN	NaN	0	NaN	2814	2719	5530
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5536	18.738	NaN	10218	30	0	1996.8	0.106	+			34007	RSIDKPLAR	9	74	352.548656206066	1054.624139218398	3	352.5487060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RSIDKPLAR_	ENST00000456324.5_1_19:36726911-36727052:+|nuORF	65.15724298150197	0.17062369902793603	2				NaN	NaN	0	NaN	2815	2719	5530
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5537	18.74	NaN	2942.3	30	0	237.22	0.033	+			46008	VAVGVARAR	9	64	449.78272949730535	897.5509060614107	2	449.78253173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VAVGVARAR_	ENSG00000162896|ENST00000356495|PIGR	73.97473282117947	0.12360187025703594	2				NaN	NaN	0	NaN	2816	2719	5530
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5549	18.766	NaN	15304	30	0	1645	0.214	+			15755	GVSQAMQQK	9	76	488.74749499897916	975.4804370647583	2	488.7474060058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVSQAMQQK_	ENSG00000166398|ENST00000299505|GARRE1	129.42129120953632	0.01549634589885217	2				NaN	NaN	0	NaN	2825	2722	5548
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5550	18.77	NaN	5530.9	30	0	1369	0.106	+			4344	ATGPALDNK	9	60	443.7352169268105	885.455880920421	2	443.7347106933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATGPALDNK_	ENSG00000196576|ENST00000359337|PLXNB2;PLXNB2|p.G308Vfs*83|1|0.39|ENSG00000196576|chr22:50289664-50289664|G/-|frameshift_variant;PLXNB2|p.G872Vfs*42|1|0.08|ENSG00000196576|chr22:50283401-50283401|C/-|frameshift_variant;PLXNB2|p.L1362Rfs*32|1|0.1|ENSG00000196576|chr22:50280578-50280579|CA/-|frameshift_variant;PLXNB2|p.V873Cfs*66|1|0.2|ENSG00000196576|chr22:50283400-50283401|-/C|frameshift_variant;PLXNB2|p.V928Cfs*3|1|0.71|ENSG00000196576|chr22:50283084-50283084|C/-|frameshift_variant	90.60085204095205	0.06317133949006545	2				NaN	NaN	0	NaN	2826	2722	5548
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5551	18.772	NaN	3545.4	30	0	1306.1	0.106				-1	CEAIMEHC	8	61	476.1728263281991	950.3310997231982	2	476.17254638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_CEAIM(Oxidation (M))EHC_	ENSG00000133863|ENST00000643185|TEX15;nc|ENSG00000133863|Q9BXT5|TEX15;TEX15|p.K1907Nfs*14|1|0.11|ENSG00000133863|chr8:30843297-30843297|T/-|frameshift_variant;TEX15|p.S2464Vfs*33|1|0.4|ENSG00000133863|chr8:30837745-30837745|T/-|frameshift_variant	19.359975847455235	0.7988239741663654	2				NaN	NaN	0	NaN	2827	2722	5548
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5552	18.774	NaN	5856.3	30	0	1240.5	0.106	+			823	AEGATCHLL	9	67	324.4917353837426	970.4533767514279	3	324.4919128417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_AEGATC(Carbamidomethyl (C))HLL_	ENSG00000211448|ENST00000438257|DIO2;ENST00000438257.8_2_14:80669457-80677836:-|nuORF;nc|ENSG00000211448|Q92813-2|DIO2	47.657333605630114	0.33044192980041115	2				NaN	NaN	0	NaN	2828	2722	5548
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5553	18.776	NaN	2266.8	30	0	372	0.106			+	13229	GIICKAAKQ	9	48	330.19069211618876	987.5502469487662	3	330.19049072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_GIIC(Carbamidomethyl (C))KAAKQ_	REV__ENSG00000121671|ENST00000616080|CRY2;REV__nc|ENSG00000121671|Q49AN0-2|CRY2	40.77816245573522	0.41113185337114944	2				NaN	NaN	0	NaN	2829	2722	5548
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5554	18.777	NaN	2335	30	0	324.76	0.106	+			7279	DAPCPLGED	9	56	458.68965560580745	NaN	0	458.6895751953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DAPCPLGED_	ENSG00000197467|ENST00000645393|COL13A1;nc|ENSG00000197467|Q5TAT6-10|COL13A1;nc|ENSG00000197467|Q5TAT6-2|COL13A1;nc|ENSG00000197467|Q5TAT6-3|COL13A1;nc|ENSG00000197467|Q5TAT6-4|COL13A1;nc|ENSG00000197467|Q5TAT6-5|COL13A1;nc|ENSG00000197467|Q5TAT6-6|COL13A1;nc|ENSG00000197467|Q5TAT6-7|COL13A1;nc|ENSG00000197467|Q5TAT6-8|COL13A1;nc|ENSG00000197467|Q5TAT6|COL13A1	29.14955571784316	0.3303970763161698	2				NaN	NaN	0	NaN	2830	2722	5548
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5555	18.779	NaN	3866.9	30	0	786.1	0.039				-1	 	0	67	421.243479110779	1260.708607932537	3	421.24298095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2831	2722	5548
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5569	18.809	NaN	240970	30	0	39607	0.214	+			2979	ASFDKAKLK	9	122	336.5339368598552	1006.5799811797656	3	336.5343322753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASFDKAKLK_	ENSG00000034510|ENST00000233143|TMSB10	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	2842	2725	5568
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5570	18.813	NaN	10656	30	0	1610.9	0.106	+			17659	IEKKATATI	9	65	487.7977294921875	NaN	0	487.7977294921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IEKKATATI_	ENSG00000084463|ENST00000261167|WBP11;ENST00000412499.1_1_2:128007051-128007162:+|nuORF	70.8162118820467	0.10318768208603292	2				NaN	NaN	0	NaN	2843	2725	5568
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5571	18.815	NaN	43544	30	0	4477.9	0.106	+			39441	STEKIYIRK	9	82	569.3355712890625	NaN	0	569.3355712890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STEKIYIRK_	ENSG00000120798|ENST00000333003|NR2C1;ENSG00000177463|ENST00000425241|NR2C2;ENST00000475707.5_1_3:15045421-15079667:+|nuORF;nc|ENSG00000120798|P13056-2|NR2C1;nc|ENSG00000120798|P13056-3|NR2C1;nc|ENSG00000177463|P49116-2|NR2C2;NR2C2|p.F563Lfs*10|1|0.4|ENSG00000177463|chr3:15042899-15042899|T/-|frameshift_variant	128.60217544463768	0.0008034130035139065	2				NaN	NaN	0	NaN	2844	2725	5568
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5572	18.817	NaN	7799.6	30	0	4428.2	0.106			+	47775	VSHEAPLRS	9	41	332.5138854980469	NaN	0	332.5138854980469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSHEAPLRS_	REV__ENST00000347635.8_1_22:45559940-45564093:+|nuORF;REV__ENST00000424634.5_3_22:45559940-45562210:+|nuORF	44.116797842482775	0.2472372736944149	2				NaN	NaN	0	NaN	2845	2725	5568
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5573	18.818	NaN	9954.3	30	0	2401.7	0.106				-1	CNICGYRSQ	9	67	579.246337890625	NaN	0	579.246337890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))NIC(Carbamidomethyl (C))GYRSQ_	ENSG00000030419|ENST00000434687|IKZF2;ENST00000412444.5_1_2:213872086-213945912:-|nuORF;ENST00000484040.1_1_2:213872086-213878776:-|nuORF;nc|ENSG00000030419|Q9UKS7-2|IKZF2;nc|ENSG00000030419|Q9UKS7-4|IKZF2;nc|ENSG00000030419|Q9UKS7-7|IKZF2;nc|ENSG00000030419|Q9UKS7-8|IKZF2	63.30626980617807	0.13521764763214936	2				NaN	NaN	0	NaN	2846	2725	5568
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5574	18.82	NaN	36928	30	0	3835.9	0.036	+			15962	HAHVDKVTY	9	110	357.1860700724823	NaN	0	357.18585205078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HAHVDKVTY_	ENSG00000181396|ENST00000313056|OGFOD3;nc|ENSG00000181396|Q6PK18-2|OGFOD3	76.7741389293348	0.08243745921263976	2				NaN	NaN	0	NaN	2847	2725	5568
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5575	18.821	NaN	8703.3	30	0	904.77	0.139	+			2833	ASAGPPSLRK	10	84	492.28556836113495	982.5565837890699	2	492.2855224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASAGPPSLRK_	ENSG00000146463|ENST00000314607|ZMYM4;nc|ENSG00000146463|Q5VZL5-2|ZMYM4;nc|ENSG00000146463|Q5VZL5-3|ZMYM4;nc|ENSG00000146463|Q5VZL5-4|ZMYM4;ZMYM4|p.A956Sfs*68|1|0.38|ENSG00000146463|chr1:35393690-35393691|-/A|frameshift_variant;ZMYM4|p.D1229Ifs*2|1|0.12|ENSG00000146463|chr1:35405175-35405175|G/-|frameshift_variant;ZMYM4|p.N1222Kfs*15|1|0.25|ENSG00000146463|chr1:35405154-35405155|-/A|frameshift_variant	73.84112541714126	0.2459384371494077	2				NaN	NaN	0	NaN	2848	2725	5568
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5596	18.87	NaN	692260	30	0	261740	0.167	+			36509	SFDKAKLK	8	122	468.7795546536405	935.544556374081	2	468.7793884277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SFDKAKLK_	CON__P21752;ENSG00000034510|ENST00000233143|TMSB10	127.46168284122857	0.2238874366747666	2				NaN	NaN	0	NaN	2863	2731	5595
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5597	18.873	NaN	198140	30	0	70829	0.106	+			2981	ASFDKAKLK	9	97	504.29778595347057	1006.5810189737412	2	504.298095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASFDKAKLK_	ENSG00000034510|ENST00000233143|TMSB10	134.7655990226056	0.012935733000282069	2				NaN	NaN	0	NaN	2864	2731	5595
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5598	18.875	NaN	229670	30	0	96959	0.106	+			51456	YVGAAKLK	8	114	425.2636988280461	848.5128447228922	2	425.2633361816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YVGAAKLK_	ENSG00000100938|ENST00000399440|GMPR2;ENSG00000137198|ENST00000259727|GMPR;ENST00000543191.5_1_6:16258277-16295414:+|nuORF;ENST00000544145.1_1_6:16289789-16295414:+|nuORF;nc|ENSG00000100938|Q9P2T1-2|GMPR2;nc|ENSG00000100938|Q9P2T1-3|GMPR2	88.64286706044652	0.2815785716369046	2				NaN	NaN	0	NaN	2865	2731	5595
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5599	18.877	NaN	63097	30	0	11309	0.106			+	14765	GTKSSIRIQ	9	98	330.53079373261835	988.570551798055	3	330.53118896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTKSSIRIQ_	REV__ENSG00000135521|ENST00000367576|LTV1	71.29570347882199	0.13518600952103718	2				NaN	NaN	0	NaN	2866	2731	5595
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5600	18.879	NaN	95219	30	0	52626	0.106			+	32224	QTASREVLQ	9	88	516.2770869984417	1030.5396210636834	2	516.2775268554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QTASREVLQ_	REV__ENST00000530991.5_1_11:8740316-8740412:-|nuORF	104.0567914643314	0.03506238181059741	2				NaN	NaN	0	NaN	2867	2731	5595
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5601	18.88	NaN	23429	30	0	3976.1	0.106			+	1719	AGYAQIALKK	10	79	531.8194262558324	NaN	0	531.8194580078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AGYAQIALKK_	REV__ENSG00000167720|ENST00000344595|SRR	68.78682469695295	0.16252363814257367	2				NaN	NaN	0	NaN	2868	2731	5595
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5602	18.882	NaN	41249	30	0	9766.3	0.036			+	9692	EMAIHRGEY	9	71	553.2584497722995	1104.502346611399	2	553.2589721679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EMAIHRGEY_	REV__ENSG00000162729|ENST00000314485|IGSF8;REV__IGSF8|p.E456Gfs*84|1|0.37|ENSG00000162729|chr1:160092641-160092642|-/C|frameshift_variant;REV__nc|ENSG00000162729|Q969P0-2|IGSF8;REV__nc|ENSG00000162729|Q969P0-3|IGSF8	56.43379154798735	0.2433427591689151	2				NaN	NaN	0	NaN	2869	2731	5595
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5603	18.883	NaN	23291	30	0	7690.6	0.144			+	11065	FESIYFLI	8	79	344.5203500066294	1030.5392206200884	3	344.5204772949219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_FESIYFLI_	REV__ENST00000367866.6_1_1:167388477-167388615:+|nuORF	21.70233525837049	0.7917639344264583	2				NaN	NaN	0	NaN	2870	2731	5595
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5623	18.93	NaN	44943	30	0	8380.5	0.214	+			4995	ATSAFQTQK	9	82	491.25378381775903	980.4930147023181	2	491.253662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSAFQTQK_	ENSG00000139687|ENST00000267163|RB1;RB1|p.V654Cfs*4|1|0.33|ENSG00000139687|chr13:48456343-48456343|A/-|frameshift_variant	199.70438780651162	3.456851077920069E-05	2				NaN	NaN	0	NaN	2884	2737	5622
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5624	18.933	NaN	19463	30	0	10144	0.106			+	31496	QLEHLLGQN	9	69	526.2801287855966	1050.5457046379931	2	526.2794189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QLEHLLGQN_	REV__ENSG00000116996|ENST00000366570|ZP4	27.882242232435846	0.5426732730940306	2				NaN	NaN	0	NaN	2885	2737	5622
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5625	18.935	NaN	20236	30	0	8556.1	0.106				-1	EECGKCFIQ	9	66	557.2406536511763	1112.4667543691526	2	557.2406005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_EECGKC(Carbamidomethyl (C))FIQ_	ENSG00000263002|ENST00000426739|ZNF234;ZNF234|p.E649Kfs*20|1|0.3|ENSG00000263002|chr19:44157958-44157958|G/-|frameshift_variant;ZNF234|p.K650Nfs*19|1|0.16|ENSG00000263002|chr19:44157962-44157962|A/-|frameshift_variant	29.14955571784316	0.5308295550522326	2				NaN	NaN	0	NaN	2886	2737	5622
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5626	18.937	NaN	19623	30	0	6576.7	0.106			+	27428	MLCTYKLQ	8	72	536.7599487304688	NaN	0	536.7599487304688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))LC(Carbamidomethyl (C))TYKLQ_	REV__SLC40A1|p.L398Wfs*55|1|0.2|ENSG00000138449|chr2:189563794-189563794|G/-|frameshift_variant	85.35947970620816	1.7418937515398478	2				NaN	NaN	0	NaN	2887	2737	5622
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5627	18.939	NaN	16193	30	0	2605.7	0.106	+			37010	SIQHPLIKK	9	88	532.3351282895779	1062.6557036459558	2	532.3353271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SIQHPLIKK_	ENSG00000151835|ENST00000382292|SACS;nc|ENSG00000151835|Q9NZJ4-2|SACS;SACS|p.A1848Qfs*2|1|0.1|ENSG00000151835|chr13:23338334-23338334|C/-|frameshift_variant;SACS|p.I3485Lfs*10|1|0.24|ENSG00000151835|chr13:23333423-23333423|T/-|frameshift_variant;SACS|p.K2931Nfs*22|1|0.23|ENSG00000151835|chr13:23335083-23335083|T/-|frameshift_variant;SACS|p.L2871Ffs*29|1|0.26|ENSG00000151835|chr13:23335263-23335264|-/A|frameshift_variant;SACS|p.L3102*|1|0.33|ENSG00000151835|chr13:23334571-23334571|A/-|frameshift_variant;SACS|p.P2063Sfs*7|1|0.36|ENSG00000151835|chr13:23337689-23337690|-/A|frameshift_variant;SACS|p.S2058Ffs*2|1|0.3|ENSG00000151835|chr13:23337703-23337704|-/A|frameshift_variant;SACS|p.S2058Lfs*19|1|0.1|ENSG00000151835|chr13:23337704-23337704|A/-|frameshift_variant;SACS|p.S4423Ffs*42|1|0.18|ENSG00000151835|chr13:23330610-23330611|-/G|frameshift_variant	96.66504779109242	0.04607440320619715	2				NaN	NaN	0	NaN	2888	2737	5622
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5628	18.941	NaN	7648.6	30	0	2502.5	0.106				-1	APTDQCLIK	9	63	523.2716844488863	1044.5288159645725	2	523.2716064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_APTDQC(Carbamidomethyl (C))LIK_	ENSG00000106302|ENST00000223026|HYAL4	34.172542307311794	0.4838870758800184	2				NaN	NaN	0	NaN	2889	2737	5622
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5629	18.943	NaN	9007.3	30	0	1872.2	0.038				-1	LSEMDGRPPAS	11	49	609.2782753148397	NaN	0	609.278564453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))LSEM(Oxidation (M))DGRPPAS_	ENST00000409514.5_2_2:233445695-233445743:+|nuORF	28.081489160057373	0.4402687122534875	2				NaN	NaN	0	NaN	2890	2737	5622
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5642	18.97	NaN	11853	30	0	6998.4	0.214	+			6257	AVSKLYASK	9	57	322.8586042679852	965.5539834041556	3	322.8588562011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVSKLYASK_	ENSG00000115561|ENST00000263856|CHMP3;ENST00000466032.1_1_2:86754275-86769420:-|nuORF;nc|ENSG00000115561|Q9Y3E7-2|CHMP3;nc|ENSG00000115561|Q9Y3E7-3|CHMP3	32.81241826257853	0.4965981579233955	2				NaN	NaN	0	NaN	2900	2740	5641
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5643	18.974	NaN	12275	30	0	8857.4	0.106			+	8940	EEYKGQNQCL	10	49	404.5179672839248	1210.5320724519745	3	404.5179748535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EEYKGQNQCL_	REV__ENSG00000126214|ENST00000334553|KLC1;REV__KLC1|p.N469Tfs*18|1|0.15|ENSG00000126214|chr14:103677436-103677436|A/-|frameshift_variant;REV__nc|ENSG00000126214|Q07866-10|KLC1;REV__nc|ENSG00000126214|Q07866-2|KLC1;REV__nc|ENSG00000126214|Q07866-3|KLC1;REV__nc|ENSG00000126214|Q07866-4|KLC1;REV__nc|ENSG00000126214|Q07866-5|KLC1;REV__nc|ENSG00000126214|Q07866-6|KLC1;REV__nc|ENSG00000126214|Q07866-7|KLC1;REV__nc|ENSG00000126214|Q07866-8|KLC1;REV__nc|ENSG00000126214|Q07866|KLC1	29.170058357718403	0.6416167986984785	2				NaN	NaN	0	NaN	2901	2740	5641
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5644	18.976	NaN	15963	30	0	1622.3	0.106	+			8413	EAQKKKQEA	9	82	530.2936527961235	1058.572752659047	2	530.2938842773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EAQKKKQEA_	ENSG00000139746|ENST00000438737|RBM26;nc|ENSG00000139746|Q5T8P6-2|RBM26;nc|ENSG00000139746|Q5T8P6-3|RBM26;nc|ENSG00000139746|Q5T8P6-4|RBM26;nc|ENSG00000139746|Q5T8P6-5|RBM26;RBM26|p.N783Ifs*5|1|0.11|ENSG00000139746|chr13:79342743-79342743|T/-|frameshift_variant	72.87924865735499	0.12833875048249987	2				NaN	NaN	0	NaN	2902	2740	5641
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5645	18.978	NaN	5017.2	30	0	626.88	0.106			+	20351	KESCFVQN	8	63	477.7227009139302	NaN	0	477.72271728515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KESCFVQN_	REV__ENSG00000185963|ENST00000356884|BICD2	44.116797842482775	1.7418937515398478	2				NaN	NaN	0	NaN	2903	2740	5641
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5646	18.98	NaN	6795.3	30	0	1609.7	0.106	+			42443	TALSGRELNV	10	65	353.8644425250933	1058.57149817548	3	353.86468505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TALSGRELNV_	ENSG00000147246|ENST00000276198|HTR2C	19.996771675451527	0.7148376616046445	2				NaN	NaN	0	NaN	2904	2740	5641
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5647	18.982	NaN	8740.8	30	0	2311.1	0.106	+			9887	EQLENTPSR	9	65	537.2629628515855	NaN	0	537.2653198242188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EQLENTPSR_	ENSG00000082258|ENST00000264157|CCNT2;ENST00000464932.1_1_2:135676424-135677557:+|nuORF;ENST00000475094.1_1_2:135676424-135700249:+|nuORF;nc|ENSG00000082258|O60583-2|CCNT2	37.81151784470057	0.28666463014928195	2				NaN	NaN	0	NaN	2905	2740	5641
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5648	18.983	NaN	3959	30	0	687.38	0.03				-1	 	0	52	325.21703480719725	648.4195166811945	2	325.2171325683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2906	2740	5641
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5660	19.008	NaN	19532	30	0	2773.2	0.214			+	19251	KADLNSNL	8	81	437.73505316950013	873.4555534058003	2	437.7347412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KADLNSNL_	REV__ENSG00000167880|ENST00000301607|EVPL;REV__ENST00000587569.5_1_17:74014525-74023279:-|nuORF	77.31757898189308	0.345924878368729	2				NaN	NaN	0	NaN	2915	2743	5659
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5661	19.012	NaN	16501	30	0	2854.7	0.106	+			4871	ATQAVFQKR	9	92	524.7986110767239	1047.5826692202477	2	524.7984619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATQAVFQKR_	ENSG00000100949|ENST00000216840|RABGGTA;ENST00000558534.5_1_14:24738716-24740321:-|nuORF;ENST00000560998.5_1_14:24737570-24740321:-|nuORF;RABGGTA|p.P160Lfs*5|1|0.17|ENSG00000100949|chr14:24269643-24269643|G/-|frameshift_variant;RABGGTA|p.Q194Sfs*43|1|0.31|ENSG00000100949|chr14:24269542-24269542|G/-|frameshift_variant	109.43880257439609	0.029570636687953285	2				NaN	NaN	0	NaN	2916	2743	5659
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5662	19.014	NaN	13376	30	0	1826.7	0.106			+	37253	SKYVHLLQ	8	95	329.86007198661457	NaN	0	329.8599853515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SKYVHLLQ_	REV__ABCC2|p.G853Efs*7|1|0.28|ENSG00000023839|chr10:99819200-99819200|A/-|frameshift_variant;REV__ENSG00000023839|ENST00000647814|ABCC2	53.351449002276354	1.7418937515398478	2				NaN	NaN	0	NaN	2917	2743	5659
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5663	19.016	NaN	20761	30	0	2737.5	0.106				-1	ASLHGRIYCK	10	83	602.8151800248768	NaN	0	602.815673828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_ASLHGRIYC(Carbamidomethyl (C))K_	ENSG00000050405|ENST00000341247|LIMA1;LIMA1|p.T536Lfs*38|2|0.4|ENSG00000050405|chr12:50177739-50177739|G/-|frameshift_variant;nc|ENSG00000050405|Q9UHB6-2|LIMA1;nc|ENSG00000050405|Q9UHB6-3|LIMA1;nc|ENSG00000050405|Q9UHB6-4|LIMA1;nc|ENSG00000050405|Q9UHB6-5|LIMA1	47.95952297671804	0.31850267256932663	2				NaN	NaN	0	NaN	2918	2743	5659
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5664	19.017	NaN	8935.3	30	0	1336.8	0.106	+			43359	TGDPNSKAL	9	59	451.7321255688291	901.4496982044582	2	451.7322692871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TGDPNSKAL_	ENSG00000172828|ENST00000303334|CES3;nc|ENSG00000172828|Q6UWW8-2|CES3	78.26377905018397	0.10505600812668463	2				NaN	NaN	0	NaN	2919	2743	5659
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5665	19.019	NaN	9236.9	30	0	1325.1	0.106	+			7137	DAAYSHHY	8	72	482.20129525103954	962.3880375688791	2	482.2010803222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DAAYSHHY_	ENSG00000059378|ENST00000263549|PARP12	88.64286706044652	0.2815785716369046	2				NaN	NaN	0	NaN	2920	2743	5659
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5666	19.021	NaN	7401.1	30	0	947.45	0.035			+	10330	ETSPVYVNQ	9	71	518.7509918586563	1035.4874307841126	2	518.750732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ETSPVYVNQ_	REV__ENSG00000116731|ENST00000311066|PRDM2;REV__nc|ENSG00000116731|Q13029-2|PRDM2;REV__nc|ENSG00000116731|Q13029-3|PRDM2;REV__nc|ENSG00000116731|Q13029-5|PRDM2;REV__PRDM2|p.G1390Efs*14|1|0.21|ENSG00000116731|chr1:13781963-13781964|GG/-|frameshift_variant;REV__PRDM2|p.N1426Ifs*3|1|0.17|ENSG00000116731|chr1:13782065-13782065|A/-|frameshift_variant;REV__PRDM2|p.P1648Qfs*14|1|0.24|ENSG00000116731|chr1:13782731-13782731|G/-|frameshift_variant	42.396135135203025	0.392153681582562	2				NaN	NaN	0	NaN	2921	2743	5659
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5679	19.048	NaN	40512	30	0	5357.3	0.215	+			51312	YSHSSSSL	8	80	434.19575796035	866.3769629875001	2	434.1955871582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YSHSSSSL_	ENSG00000139641|ENST00000394048|ESYT1;ENST00000548142.1_1_12:56532791-56536718:+|nuORF;nc|ENSG00000139641|Q9BSJ8-2|ESYT1	123.9887779854562	0.22885264854939885	2				NaN	NaN	0	NaN	2931	2746	5678
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5680	19.052	NaN	9644.8	30	0	1492.1	0.106	+			3862	ATAMVTEQK	9	73	489.7498154175412	977.4850779018824	2	489.7497253417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATAMVTEQK_	ENSG00000166398|ENST00000299505|GARRE1	120.8684288430529	0.02067403653475984	2				NaN	NaN	0	NaN	2932	2746	5678
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5681	19.054	NaN	26165	30	0	2523	0.106	+			31024	QETLKHSGI	9	86	506.7745207136837	1011.5344884941675	2	506.7746276855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QETLKHSGI_	ENSG00000163166|ENST00000295321|IWS1;IWS1|p.S802Afs*7|2|0.29|ENSG00000163166|chr2:127481100-127481100|T/-|frameshift_variant;nc|ENSG00000163166|Q96ST2-2|IWS1;nc|ENSG00000163166|Q96ST2-3|IWS1	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	2933	2746	5678
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5682	19.056	NaN	19154	30	0	2545.7	0.106	+			34553	RVLEAIQKK	9	74	542.845632473569	1083.676712013938	2	542.845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RVLEAIQKK_	ENSG00000169375|ENST00000394947|SIN3A;SIN3A|p.G659Afs*26|1|0.14|ENSG00000169375|chr15:75396375-75396375|C/-|frameshift_variant	145.46060221211434	0.007927189773590037	2				NaN	NaN	0	NaN	2934	2746	5678
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5683	19.058	NaN	16446	30	0	2441.1	0.106	+			13249	GINGDIRAK	9	74	472.2692692673149	942.5239856014298	2	472.269287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GINGDIRAK_	ENSG00000101076|ENST00000316673|HNF4A;ENST00000372920.1_1_20:43030124-43058302:+|nuORF;nc|ENSG00000101076|P41235-2|HNF4A;nc|ENSG00000101076|P41235-3|HNF4A;nc|ENSG00000101076|P41235-4|HNF4A;nc|ENSG00000101076|P41235-6|HNF4A;nc|ENSG00000101076|P41235-7|HNF4A;nc|ENSG00000101076|P41235|HNF4A	106.68306549817024	0.032382560583716295	2				NaN	NaN	0	NaN	2935	2746	5678
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5684	19.059	NaN	8193	30	0	912.62	0.106	+			25272	LNQKMKSNWP	10	74	623.3249794910591	1244.6354060489182	2	623.325439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LNQKMKSNWP_	ENST00000329433.10_1_5:179048281-179050040:-|nuORF	52.936696900407355	0.4300801048568001	2				NaN	NaN	0	NaN	2936	2746	5678
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5685	19.061	NaN	10986	30	0	1518.2	0.036	+			3365	ASNPCGNIQR	10	76	558.7643367520915	1115.5141205709829	2	558.764892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_ASNPC(Carbamidomethyl (C))GNIQR_	ENSG00000112159|ENST00000369393|MDN1;MDN1|p.E2692*|2|0.32|ENSG00000112159|chr6:89706133-89706134|-/A|frameshift_variant;MDN1|p.F2691Lfs*7|2|0.37|ENSG00000112159|chr6:89706134-89706134|A/-|frameshift_variant;MDN1|p.K2642Nfs*17|2|0.29|ENSG00000112159|chr6:89707449-89707449|T/-|frameshift_variant;MDN1|p.L4077Cfs*15|1|0.16|ENSG00000112159|chr6:89680625-89680625|G/-|frameshift_variant;MDN1|p.L5278Ffs*6|1|0.18|ENSG00000112159|chr6:89652273-89652274|-/A|frameshift_variant	53.08895987439943	0.42869529153390606	2				NaN	NaN	0	NaN	2937	2746	5678
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5697	19.087	NaN	16716	30	0	1651.5	0.214	+			39677	STIGPEGVHQK	11	88	576.804330678216	1151.594108423232	2	576.8040161132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STIGPEGVHQK_	nc|ENSG00000157654|Q9Y2D5-8|PALM2AKAP2;nc|ENSG00000157654|Q9Y2D5-9|PALM2AKAP2	126.02560380233024	0.008598064468488318	2				NaN	NaN	0	NaN	2946	2749	5696
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5698	19.091	NaN	13865	30	0	4437.7	0.106	+			31652	QMVRNFRKP	9	76	588.3267705035139	1174.6389880738277	2	588.3267822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QMVRNFRKP_	ENSG00000181192|ENST00000263035|DHTKD1	85.16082228582465	0.07850854922700509	2				NaN	NaN	0	NaN	2947	2749	5696
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5699	19.093	NaN	10498	30	0	3538.1	0.106	+			32726	RAPAGGSL	8	56	364.70594952894635	727.3973461246927	2	364.7060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RAPAGGSL_	ENSG00000041802|ENST00000265245|LSG1	71.29570347882199	0.39610197767395533	2				NaN	NaN	0	NaN	2948	2749	5696
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5700	19.095	NaN	27387	30	0	9240.7	0.106				-1	 	0	64	338.5533976815411	1012.6383636448234	3	338.5534362792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2949	2749	5696
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5701	19.097	NaN	21688	30	0	2175.5	0.106			+	7274	DANPFKEKV	9	88	524.2771840899499	1046.5398152466996	2	524.2775268554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DANPFKEKV_	REV__tr|U7SSU1|U7SSU1_FUSNUL-serineammonia-lyaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01494PE=3SV=1	71.87747018426188	0.13267044672804276	2				NaN	NaN	0	NaN	2950	2749	5696
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5702	19.098	NaN	5984.5	30	0	782.48	0.106	+			19801	KEAVIKHSL	9	73	512.8111751203099	1023.6077973074199	2	512.81103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KEAVIKHSL_	ENSG00000080608|ENST00000397885|PUM3	93.1432384553994	0.056003526918089595	2				NaN	NaN	0	NaN	2951	2749	5696
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5703	19.1	NaN	11722	30	0	2062.6	0.031			+	1661	AGPVGFAK	8	72	373.71325722521425	745.4119615172285	2	373.7132873535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AGPVGFAK_	REV__ENSG00000244617|ENST00000320256|ASPRV1;REV__nc|ENSG00000244617|Q53RT3|ASPRV1	65.89745868150666	0.44339748671293633	2				NaN	NaN	0	NaN	2952	2749	5696
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5718	19.131	NaN	39498	30	0	4324.9	0.214	+			20172	KEKVSTQNL	9	90	523.7958048827231	1045.5770568322462	2	523.7957763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEKVSTQNL_	ENSG00000100342|ENST00000397278|APOL1;nc|ENSG00000100342|O14791-2|APOL1;nc|ENSG00000100342|O14791-3|APOL1	104.01359247289065	0.03510646158778409	2				NaN	NaN	0	NaN	2964	2752	5717
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5719	19.135	NaN	12825	30	0	1459.7	0.106	+			4749	ATMQGDREQLK	11	78	638.8187943757408	1275.6230358182816	2	638.8192749023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATMQGDREQLK_	ADNP|p.Y1033Mfs*48|1|0.33|ENSG00000101126|chr20:50891618-50891618|G/-|frameshift_variant;ENSG00000101126|ENST00000621696|ADNP	132.0280612876623	0.0011415323429238122	2				NaN	NaN	0	NaN	2965	2752	5717
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5720	19.137	NaN	15435	30	0	9933.3	0.106	+			13223	GIGTWGIQGP	10	58	493.2588129065241	984.5030728798482	2	493.25860595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GIGTWGIQGP_	ENST00000539367.5_1_11:72287653-72353469:-|nuORF	25.57405402267927	0.6709832231498071	2				NaN	NaN	0	NaN	2966	2752	5717
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5721	19.139	NaN	17037	30	0	6778.2	0.106				-1	 	0	64	349.8535702883508	1046.5388814652524	3	349.8537292480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	2967	2752	5717
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5722	19.141	NaN	11208	30	0	1235.4	0.106	+			4737	ATMPDNTAAQK	11	69	574.2743452624552	1146.5341375917103	2	574.274169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATMPDNTAAQK_	ENSG00000105357|ENST00000642316|MYH14;MYH14|p.G549Wfs*8|1|0.23|ENSG00000105357|chr19:50250519-50250520|-/C|frameshift_variant;MYH14|p.L1950Sfs*14|1|0.34|ENSG00000105357|chr19:50309646-50309646|C/-|frameshift_variant;MYH14|p.M997*|1|0.19|ENSG00000105357|chr19:50271483-50271483|A/-|frameshift_variant;MYH14|p.P548Lfs*25|2|0.32|ENSG00000105357|chr19:50250520-50250520|C/-|frameshift_variant;MYH14|p.R929Gfs*44|1|0.38|ENSG00000105357|chr19:50268237-50268237|G/-|frameshift_variant;nc|ENSG00000105357|Q7Z406-4|MYH14;nc|ENSG00000105357|Q7Z406-5|MYH14;nc|ENSG00000105357|Q7Z406-6|MYH14;nc|ENSG00000105357|Q7Z406|MYH14	69.2159832094219	0.24227581199444026	2				NaN	NaN	0	NaN	2968	2752	5717
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5723	19.142	NaN	13820	30	0	1577.1	0.036			+	-1	LCCRLKWD	8	76	547.268652544966	1092.522752156732	2	547.2689208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_LCC(Carbamidomethyl (C))RLKWD_	REV__ENST00000264595.6_1_4:178352949-178354453:-|nuORF	79.9392285194092	0.32408006123154964	2				NaN	NaN	0	NaN	2969	2752	5717
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5724	19.143	NaN	6987	30	0	842.27	0.14	+			48780	VTYMIPLGL	9	66	503.7874821389092	1005.5604113446184	2	503.7869567871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VTYMIPLGL_	ENSG00000180638|ENST00000433844|SLC47A2;nc|ENSG00000180638|Q86VL8-2|SLC47A2;nc|ENSG00000180638|Q86VL8|SLC47A2	68.484700416344	0.1473408039581241	2				NaN	NaN	0	NaN	2970	2752	5717
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5739	19.176	NaN	390180	30	0	97939	0.078	+			41014	SVGSVITKK	9	97	459.7844705079409	917.5543880826818	2	459.78411865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVGSVITKK_	ENSG00000076554|ENST00000518937|TPD52;ENST00000517445.5_1_8:80962678-80964851:-|nuORF;ENST00000521354.5_1_8:80950353-81083761:-|nuORF;ENST00000522364.5_1_8:80963727-80992703:-|nuORF;nc|ENSG00000076554|P55327-2|TPD52;nc|ENSG00000076554|P55327-3|TPD52;nc|ENSG00000076554|P55327-5|TPD52;nc|ENSG00000076554|P55327-6|TPD52;nc|ENSG00000076554|P55327-7|TPD52;nc|ENSG00000076554|P55327|TPD52	204.624747049445	1.3753862112523631E-05	2				NaN	NaN	0	NaN	2982	2755	5738
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5740	19.177	NaN	83142	30	0	20665	0.106	+			2980	ASFDKAKLK	9	84	336.5339368598552	1006.5799811797656	3	336.5342102050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASFDKAKLK_	ENSG00000034510|ENST00000233143|TMSB10	44.377184641726394	0.36891676396732553	2				NaN	NaN	0	NaN	2983	2755	5738
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5741	19.179	NaN	21471	30	0	2296.3	0.106	+			35555	SAVSTRVYK	9	78	505.7870893876877	1009.5596258421754	2	505.78485107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAVSTRVYK_	ENST00000589805.1_1_17:42275437-42276541:-|nuORF;ENST00000590169.5_1_17:42275437-42275799:-|nuORF	123.20810148215591	0.019257656778428764	2				NaN	NaN	0	NaN	2984	2755	5738
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5742	19.181	NaN	14820	30	0	2649.4	0.106			+	-1	PWGSCTPAGAG	11	62	530.7303422217407	1059.4461315102812	2	530.7301025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_PWGSC(Carbamidomethyl (C))TPAGAG_	REV__JARID2|p.P592Lfs*57|2|0.38|ENSG00000008083|chr6:15496995-15496995|C/-|frameshift_variant	34.172542307311794	0.6313490974540716	2				NaN	NaN	0	NaN	2985	2755	5738
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5743	19.183	NaN	15706	30	0	650.32	0.106			+	33847	RRFESEDQFEE	11	86	736.3266060998835	1470.638659266567	2	736.3238525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RRFESEDQFEE_	REV__ENSG00000165370|ENST00000651716|GPR101	38.714083909724	0.5755383074156426	2				NaN	NaN	0	NaN	2986	2755	5738
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5744	19.185	NaN	11768	30	0	2856.8	0.106			+	47915	VSLSAKGDSL	10	66	488.7672199870378	NaN	0	488.76806640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VSLSAKGDSL_	REV__ENSG00000113555|ENST00000231484|PCDH12;REV__PCDH12|p.L685Yfs*7|3|0.18|ENSG00000113555|chr5:141955800-141955800|G/-|frameshift_variant	40.77816245573522	0.36390427802201647	2				NaN	NaN	0	NaN	2987	2755	5738
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5745	19.186	NaN	20609	30	0	9004.2	0.106			+	20778	KHVMKNVS	8	66	471.763746362032	941.512939790864	2	471.7630310058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KHVMKNVS_	REV__ENSG00000065559|ENST00000353533|MAP2K4;REV__ENST00000602537.5_1_17:11984679-12043167:+|nuORF;REV__MAP2K4|p.D247Afs*28|1|0.28|ENSG00000065559|chr17:12113287-12113290|ACTT/-|frameshift_variant;REV__MAP2K4|p.L346Cfs*17|1|0.61|ENSG00000065559|chr17:12129283-12129283|T/-|frameshift_variant;REV__nc|ENSG00000065559|P45985-2|MAP2K4	31.954861631926434	0.7126016770032289	2				NaN	NaN	0	NaN	2988	2755	5738
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5746	19.188	NaN	6975.5	30	0	1900.7	0.032	+			12080	GAAKKPKK	8	54	414.27697325580243	826.5393935784049	2	414.2764587402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_GAAKKPKK_	ENSG00000124575|ENST00000244534|H1-3;ENSG00000168298|ENST00000304218|H1-4;ENSG00000187837|ENST00000343677|H1-2;REV__ENSG00000187837|ENST00000343677|H1-2	57.81127852772723	0.5234495074909924	2				NaN	NaN	0	NaN	2989	2755	5738
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5764	19.225	NaN	61832	30	0	11523	0.211			+	19395	KANHENWEEQL	11	95	699.3254869672264	1396.6364210012528	2	699.3238525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KANHENWEEQL_	REV__ENSG00000100941|ENST00000216832|PNN;REV__ENST00000557680.1_1_14:39648378-39651535:+|nuORF	58.62960593111931	0.3356877741313683	2				NaN	NaN	0	NaN	3004	2758	5763
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5765	19.228	NaN	24001	30	0	2944	0.106	+			33801	RQKAELGR	8	94	479.28298235745103	956.5514117817021	2	479.2828063964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RQKAELGR_	ENSG00000139437|ENST00000405876|TCHP	84.9155231211612	0.2928622555056503	2				NaN	NaN	0	NaN	3005	2758	5763
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5766	19.23	NaN	31844	30	0	7568	0.106	+			38845	SSNLPVNNK	9	81	486.75899744017414	971.5034419471483	2	486.7587585449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSNLPVNNK_	ENSG00000135974|ENST00000258457|C2orf49	136.26810882979174	0.012230845423532208	2				NaN	NaN	0	NaN	3006	2758	5763
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5767	19.232	NaN	8972.9	30	0	838.2	0.106			+	29979	PPAQPRPLAQ	10	69	358.87308193753074	1073.5974164127922	3	358.873291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PPAQPRPLAQ_	REV__ENSG00000196782|ENST00000509479|MAML3	27.047317107675042	0.6589519614906109	2				NaN	NaN	0	NaN	3007	2758	5763
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5768	19.234	NaN	41379	30	0	5654.6	0.106	+			33279	RGKVYNIR	8	96	503.30126888058095	1004.5879848279619	2	503.3011169433594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RGKVYNIR_	tr|U7T2L6|U7T2L6_FUSNUDNAgyrasesubunitAOS=FusobacteriumnucleatumCTI-5OX=1316586GN=gyrAPE=3SV=1	42.396135135203025	0.6414440140393314	2				NaN	NaN	0	NaN	3008	2758	5763
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5769	19.236	NaN	10656	30	0	1414.4	0.036	+			32028	QRPHHGDPQ	9	77	536.2566211100911	1070.4986892869822	2	536.257080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QRPHHGDPQ_	ENSG00000144868|ENST00000321871|TMEM108;ENST00000511388.1_1_3:133098579-133114827:+|nuORF;nc|ENSG00000144868|Q6UXF1-2|TMEM108;TMEM108|p.P359Gfs*53|1|0.38|ENSG00000144868|chr3:133380781-133380782|-/GG|frameshift_variant	53.351449002276354	0.2690372970092375	2				NaN	NaN	0	NaN	3009	2758	5763
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5770	19.236	NaN	6216.8	30	0	4275.9	0.139			+	7477	DGATALKW	8	41	431.2269019444939	860.4392509557878	2	431.2267150878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DGATALKW_	REV__ENSG00000105676|ENST00000535612|ARMC6;REV__nc|ENSG00000105676|Q6NXE6-2|ARMC6	44.116797842482775	0.6307669463330267	2				NaN	NaN	0	NaN	3010	2758	5763
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5786	19.27	NaN	19298	30	0	2720.8	0.214	+			32223	QTAQPPLKAG	10	80	505.7870893876877	1009.5596258421754	2	506.79278564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QTAQPPLKAG_	ENST00000399775.2_1_9:34521738-34522817:-|nuORF	45.97224482568171	0.49411383603842696	2				NaN	NaN	0	NaN	3023	2761	5785
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5787	19.274	NaN	10416	30	0	2099.3	0.106	+			12455	GEDGSGKTTL	10	76	482.7329170411237	963.4512811490474	2	482.732666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEDGSGKTTL_	ENSG00000135720|ENST00000258198|DYNC1LI2;nc|ENSG00000135720|O43237-2|DYNC1LI2	109.43880257439609	0.049666173740610824	2				NaN	NaN	0	NaN	3024	2761	5785
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5788	19.276	NaN	6715.1	30	0	1193.6	0.106	+			5734	AVFSKSVQK	9	71	497.28946050478703	992.5643680763741	2	497.2899475097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVFSKSVQK_	ENSG00000012048|ENST00000357654|BRCA1;nc|ENSG00000012048|P38398-4|BRCA1;nc|ENSG00000012048|P38398-7|BRCA1;nc|ENSG00000012048|P38398-8|BRCA1	93.5975768576971	0.05472259948179787	2				NaN	NaN	0	NaN	3025	2761	5785
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5789	19.278	NaN	11546	30	0	2349.7	0.106	+			32929	REAEQRRAYL	10	73	646.3466765825235	1290.678800231847	2	646.3471069335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_REAEQRRAYL_	ENSG00000234745|ENST00000412585|HLA-B;ENST00000474381.1_1_6:31323854-31324663:-|nuORF;HLA-B|p.H215Tfs*11|1|0.35|ENSG00000234745|chr6:31355569-31355569|G/-|frameshift_variant;HLA-B|p.P209Qfs*5|6|0.16|ENSG00000234745|chr6:31355586-31355586|G/-|frameshift_variant;HLA-B|p.V306Afs*13|1|0.49|ENSG00000234745|chr6:31355202-31355202|A/-|frameshift_variant;HLA-B|p.V312Cfs*22|1|0.28|ENSG00000234745|chr6:31355185-31355186|-/A|frameshift_variant	90.14881205920913	0.1302219035121668	2				NaN	NaN	0	NaN	3026	2761	5785
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5790	19.279	NaN	15170	30	0	1629.3	0.106	+			9067	EGGPPPRPKR	10	94	545.809942039458	1089.6053311457158	2	545.8096923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EGGPPPRPKR_	ENSG00000218891|ENST00000325421|ZNF579	51.19269402634007	0.44601001148513897	2				NaN	NaN	0	NaN	3027	2761	5785
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5791	19.281	NaN	4344.7	30	0	643.91	0.034	+			7287	DAQITLPR	8	63	478.2635778505563	954.5126027679127	2	478.2638854980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))DAQITLPR_	ENSG00000152580|ENST00000282466|IGSF10;IGSF10|p.K1527Rfs*29|1|0.18|ENSG00000152580|chr3:151445403-151445403|G/-|frameshift_variant;IGSF10|p.M465T|1|0.38|ENSG00000152580|chr3:151448587-151448587|A/G|missense_variant;IGSF10|p.N1400Tfs*18|1|0.29|ENSG00000152580|chr3:151445782-151445782|T/-|frameshift_variant;IGSF10|p.R1021Gfs*41|1|0.13|ENSG00000152580|chr3:151446921-151446921|C/-|frameshift_variant;IGSF10|p.S1050Afs*12|1|0.27|ENSG00000152580|chr3:151446833-151446833|T/-|frameshift_variant;IGSF10|p.S2089Cfs*5|1|0.06|ENSG00000152580|chr3:151438296-151438297|-/TAACAGTTATAACA|frameshift_variant	56.72105179125745	0.5342425954139568	2				NaN	NaN	0	NaN	3028	2761	5785
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5792	19.282	NaN	9280.2	30	0	4613.1	0.143	+			31992	QRGERIPK	8	53	328.529422623629	982.5664384710869	3	328.52960205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QRGERIPK_	ENSG00000174738|ENST00000312521|NR1D2;ENST00000492552.5_1_3:23987629-24018907:+|nuORF	23.04248740728303	0.7814162927298575	2				NaN	NaN	0	NaN	3029	2761	5785
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5807	19.315	NaN	78655	30	0	19421	0.215	+			41556	SVQENIQQK	9	83	537.2830366447487	1072.5515203562973	2	537.2833862304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVQENIQQK_	ENSG00000138160|ENST00000260731|KIF11	159.27591364854348	0.004707062175358555	2				NaN	NaN	0	NaN	3041	2764	5806
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5808	19.319	NaN	20916	30	0	2984.1	0.106	+			32906	RDTLAKRL	8	97	324.86959724524854	971.5869623359456	3	324.86981201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RDTLAKRL_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	51.52775601994872	0.5847804192265663	2				NaN	NaN	0	NaN	3042	2764	5806
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5809	19.321	NaN	16725	30	0	2076.4	0.106	+			39783	STKSSLLRQ	9	90	510.29586589795576	1018.5771788627115	2	510.29583740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STKSSLLRQ_	ENST00000356683.6_2_17:7162806-7163001:+|nuORF	141.52041321563706	0.009766778904176347	2				NaN	NaN	0	NaN	3043	2764	5806
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5810	19.323	NaN	14441	30	0	1652.7	0.106	+			17466	ICLIYFLPSP	10	78	583.3200743603369	1164.6255957874737	2	583.3201293945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ICLIYFLPSP_	ENST00000604516.1_1_6:79943638-79943913:+|nuORF	29.170058357718403	0.6416167986984785	2				NaN	NaN	0	NaN	3044	2764	5806
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5811	19.325	NaN	13136	30	0	2081.3	0.106	+			6986	CQEMQHVI	8	79	494.22253717613637	986.4305214190728	2	494.2223205566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_CQEMQHVI_	ENSG00000145808|ENST00000274487|ADAMTS19;nc|ENSG00000145808|Q8TE59|ADAMTS19	50.0245360154114	0.5941082100236891	2				NaN	NaN	0	NaN	3045	2764	5806
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5812	19.326	NaN	17761	30	0	6459.4	0.036	+			19702	KDSKQILSI	9	90	344.5415317226822	1030.6027657682466	3	344.5412902832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KDSKQILSI_	ENSG00000121210|ENST00000409959|TMEM131L;ENST00000497247.1_1_4:154523305-154524605:+|nuORF;nc|ENSG00000121210|A2VDJ0-2|TMEM131L;nc|ENSG00000121210|A2VDJ0-3|TMEM131L;nc|ENSG00000121210|A2VDJ0-6|TMEM131L;nc|ENSG00000121210|A2VDJ0|TMEM131L	41.42661286455405	0.403525789677298	2				NaN	NaN	0	NaN	3046	2764	5806
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5813	19.327	NaN	11193	30	0	1483.9	0.143			+	11866	FTDTETEEPGV	11	79	612.766210329849	1223.5178677264978	2	612.7656860351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FTDTETEEPGV_	REV__ENSG00000185760|ENST00000370398|KCNQ5;REV__nc|ENSG00000185760|Q9NR82-2|KCNQ5;REV__nc|ENSG00000185760|Q9NR82-3|KCNQ5;REV__nc|ENSG00000185760|Q9NR82-5|KCNQ5;REV__nc|ENSG00000185760|Q9NR82-6|KCNQ5;REV__nc|ENSG00000185760|Q9NR82-7|KCNQ5	54.776311868738084	0.3700837260462177	2				NaN	NaN	0	NaN	3047	2764	5806
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5831	19.366	NaN	47762	30	0	11487	0.214	+			39457	STEPPYSQK	9	90	518.7509918586563	1035.4874307841126	2	518.7509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STEPPYSQK_	EEF1A1|p.P263Lfs*27|1|0.36|ENSG00000156508|chr6:73518595-73518595|G/-|frameshift_variant;ENSG00000156508|ENST00000309268|EEF1A1;ENST00000359165.5_1_12:19610040-19610154:-|nuORF;ENST00000401075.3_1_1:31961199-31961370:-|nuORF;ENST00000434005.1_1_7:22551057-22551540:-|nuORF;ENST00000443590.1_1_2:107314616-107314670:-|nuORF;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	117.81106730687013	0.02252488733980868	2				NaN	NaN	0	NaN	3062	2767	5830
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5832	19.37	NaN	147260	30	0	21064	0.106	+			46927	VIYEKTIRK	9	99	575.3532953920711	1148.6920378509421	2	575.3534545898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VIYEKTIRK_	ENSG00000124429|ENST00000262753|POF1B;nc|ENSG00000124429|Q8WVV4-1|POF1B;nc|ENSG00000124429|Q8WVV4-3|POF1B	134.7655990226056	0.012935733000282069	2				NaN	NaN	0	NaN	3063	2767	5830
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5833	19.372	NaN	24662	30	0	5321.1	0.106			+	-1	QEGECTAQ	8	80	461.68207036404806	921.3495877948961	2	461.6823425292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_QEGEC(Carbamidomethyl (C))TAQ_	REV__ENST00000438378.2_1_2:132278647-132279013:+|nuORF	54.722347961057174	0.5540294759312786	2				NaN	NaN	0	NaN	3064	2767	5830
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5834	19.374	NaN	7234.1	30	0	859.66	0.106			+	-1	KESNGEFIMD	10	69	593.2563510108378	1184.4981490884754	2	593.256591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_KESNGEFIM(Oxidation (M))D_	REV__CPXM2|p.A711Pfs*35|1|0.36|ENSG00000121898|chr10:123746904-123746904|C/-|frameshift_variant;REV__CPXM2|p.G655Efs*9|1|0.31|ENSG00000121898|chr10:123754718-123754718|T/-|frameshift_variant;REV__ENSG00000121898|ENST00000241305|CPXM2;REV__ENST00000368854.7_1_10:125528237-125699754:-|nuORF	44.377184641726394	0.5088115166961078	2				NaN	NaN	0	NaN	3065	2767	5830
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5835	19.376	NaN	14153	30	0	1933	0.106	+			48064	VSSPKLAPK	9	83	463.78737010407514	925.5601872749503	2	463.786865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSSPKLAPK_	ENSG00000058673|ENST00000367210|ZC3H11A;ENSG00000215817|ENST00000651890|ZC3H11B;ENST00000495527.5_2_1:203819629-203821524:+|nuORF;nc|ENSG00000214558|P0DQW0|ZC3H11C	76.16968421966216	0.11411088698345859	2				NaN	NaN	0	NaN	3066	2767	5830
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5836	19.377	NaN	6621.7	30	0	877.67	0.035	+			38740	SSLNSGSSLGL	11	68	511.2621115812874	1020.5096702293748	2	511.26220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSLNSGSSLGL_	ENSG00000143569|ENST00000428931|UBAP2L;ENST00000489076.1_1_1:154227743-154229994:+|nuORF;nc|ENSG00000143569|Q14157-1|UBAP2L;nc|ENSG00000143569|Q14157-3|UBAP2L;nc|ENSG00000143569|Q14157-4|UBAP2L;nc|ENSG00000143569|Q14157-5|UBAP2L	49.536043120802724	0.4274608637932522	2				NaN	NaN	0	NaN	3067	2767	5830
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5837	19.378	NaN	7664.4	30	0	1052	0.139	+			36343	SESSPPKAM	9	66	467.2209897359806	932.4274265387612	2	467.22064208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SESSPPKAM_	ENSG00000050405|ENST00000341247|LIMA1;LIMA1|p.T536Lfs*38|2|0.4|ENSG00000050405|chr12:50177739-50177739|G/-|frameshift_variant;nc|ENSG00000050405|Q9UHB6-2|LIMA1;nc|ENSG00000050405|Q9UHB6-3|LIMA1;nc|ENSG00000050405|Q9UHB6-4|LIMA1;nc|ENSG00000050405|Q9UHB6-5|LIMA1	82.24051045832904	0.08786059719216216	2				NaN	NaN	0	NaN	3068	2767	5830
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5851	19.408	NaN	24912	30	0	2787.9	0.212			+	-1	MSEPCNDLQTK	11	84	641.275940468951	1280.537328004702	2	641.2764892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))SEPCNDLQTK_	REV__ENSG00000144824|ENST00000431670|PHLDB2;REV__PHLDB2|p.K1064Nfs*28|1|0.29|ENSG00000144824|chr3:111967696-111967696|A/-|frameshift_variant;REV__PHLDB2|p.S734Ifs*5|1|0.07|ENSG00000144824|chr3:111939544-111939545|-/TAACT|frameshift_variant;REV__PHLDB2|p.V822Lfs*6|1|0.1|ENSG00000144824|chr3:111945316-111945316|G/-|frameshift_variant	63.53385203322761	0.2919106290768168	2				NaN	NaN	0	NaN	3079	2770	5850
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5852	19.411	NaN	12282	30	0	3082.4	0.106	+			33118	RENTQTTI	8	64	481.74860057096544	961.4826482087309	2	481.74859619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RENTQTTI_	ENSG00000165119|ENST00000376263|HNRNPK;ENST00000485383.1_1_3:96068520-96068997:+|nuORF;nc|ENSG00000165119|P61978-3|HNRNPK;nc|ENSG00000165119|P61978|HNRNPK	77.31757898189308	0.345924878368729	2				NaN	NaN	0	NaN	3080	2770	5850
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5853	19.413	NaN	17130	30	0	2112	0.106	+			14431	GTASLAQVHK	10	81	506.28276267807115	1010.5509724229423	2	506.2828369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTASLAQVHK_	ADCK1|p.Q416Pfs*27|1|0.38|ENSG00000063761|chr14:77931552-77931553|-/C|frameshift_variant;ENSG00000063761|ENST00000238561|ADCK1;nc|ENSG00000063761|Q86TW2-3|ADCK1;nc|ENSG00000063761|Q86TW2|ADCK1	126.24258497203832	0.01851300475414303	2				NaN	NaN	0	NaN	3081	2770	5850
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5854	19.415	NaN	8068.4	30	0	961.31	0.106	+			35435	SASDCFARK	9	71	492.7317529756348	983.4489530180696	2	492.7318115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SASDCFARK_	ENST00000274000.9_2_4:113153062-113153314:+|nuORF	95.81516180277367	0.04847050768394289	2				NaN	NaN	0	NaN	3082	2770	5850
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5855	19.417	NaN	13213	30	0	2658	0.106			+	37868	SNRRRRQTWRR	11	74	524.6340317946988	1570.8802659842963	3	524.6339721679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SNRRRRQTWRR_	REV__ENST00000233468.4_1_2:24290678-24291201:-|nuORF	7.341340011310055	0.8361137611760102	2				NaN	NaN	0	NaN	3083	2770	5850
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5856	19.419	NaN	10264	30	0	1567.2	0.106	+			47911	VSLQPEKPVV	10	74	548.322000293779	1094.6294476543578	2	548.3228759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VSLQPEKPVV_	ENSG00000141384|ENST00000269142|TAF4B;ENST00000504528.2_1_4:113747508-113747850:+|nuORF;nc|ENSG00000141384|Q92750-2|TAF4B	63.53385203322761	0.33370026130094593	2				NaN	NaN	0	NaN	3084	2770	5850
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5857	19.421	NaN	11576	30	0	2005.1	0.03				-1	 	0	74	329.7213414885481	657.4281300438962	2	329.7215576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3085	2770	5850
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5869	19.446	NaN	79035	30	0	32429	0.214			+	6798	CFVFFGPI	8	112	465.2330023032937	928.4514516733874	2	465.2326965332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CFVFFGPI_	REV__ENST00000313334.12_1_1:52552599-52552851:+|nuORF	43.626045697637714	0.6338121648150432	2				NaN	NaN	0	NaN	3094	2773	5868
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5870	19.45	NaN	32452	30	0	9675.7	0.106	+			39536	STFSGLAKHK	10	91	538.2986940070319	NaN	0	538.298583984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STFSGLAKHK_	ENSG00000019549|ENST00000020945|SNAI2	150.81021883065287	4.1348225565990566E-05	2				NaN	NaN	0	NaN	3095	2773	5868
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5871	19.452	NaN	19312	30	0	5313.8	0.106				-1	STRRRMRP	8	65	359.2010789272454	1074.5814073819363	3	359.2012939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_STRRRM(Oxidation (M))RP_	ENST00000378827.4_1_20:6748685-6748922:+|nuORF	33.51558372728122	0.7005509609380386	2				NaN	NaN	0	NaN	3096	2773	5868
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5872	19.454	NaN	13178	30	0	2403.2	0.106	+			4705	ATLTTTSATSK	11	68	541.2905611873398	1080.5665694414795	2	541.2906494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATLTTTSATSK_	ENSG00000010244|ENST00000394670|ZNF207;ENST00000584696.1_1_17:30693734-30695045:+|nuORF;nc|ENSG00000010244|O43670-2|ZNF207;nc|ENSG00000010244|O43670-3|ZNF207;nc|ENSG00000010244|O43670|ZNF207	150.81021883065287	6.916300504743181E-05	2				NaN	NaN	0	NaN	3097	2773	5868
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5873	19.455	NaN	17669	30	0	3384.7	0.106	+			15021	GTNGPVDLKK	10	77	514.7903373017451	1027.5661216702902	2	514.7904052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTNGPVDLKK_	ENSG00000164305|ENST00000308394|CASP3	79.48907831485694	0.19979514868675113	2				NaN	NaN	0	NaN	3098	2773	5868
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5874	19.457	NaN	22888	30	0	4894.9	0.106			+	41671	SVSAIATKR	9	99	466.77985911059915	931.5451652879983	2	466.7795715332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVSAIATKR_	REV__ENSG00000133962|ENST00000256343|CATSPERB	42.396135135203025	0.392153681582562	2				NaN	NaN	0	NaN	3099	2773	5868
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5875	19.459	NaN	16417	30	0	3642.8	0.038	+			10676	EYSKQMQRF	9	77	616.790544744031	1231.5665365548618	2	616.7902221679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_EYSKQM(Oxidation (M))QRF_	ENSG00000116478|ENST00000373548|HDAC1;ENSG00000196591|ENST00000519065|HDAC2;ENST00000463172.5_1_1:32757770-32792715:+|nuORF;ENST00000481281.5_1_1:32757770-32793222:+|nuORF;nc|ENSG00000196591|Q92769-3|HDAC2	42.396135135203025	0.392153681582562	2				NaN	NaN	0	NaN	3100	2773	5868
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5887	19.485	NaN	130510	30	0	28266	0.177	+			41353	SVMAQVRQK	9	111	523.792296437905	1045.5700399426098	2	523.7924194335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVMAQVRQK_	ENSG00000038358|ENST00000358933|EDC4;ENST00000572067.1_1_16:67917790-67918048:+|nuORF;nc|ENSG00000038358|Q6P2E9-2|EDC4	159.27591364854348	0.004707062175358555	2				NaN	NaN	0	NaN	3109	2776	5886
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5888	19.488	NaN	15251	30	0	1280.4	0.106	+			917	AEIEHHEM	8	78	498.2161084385941	994.4176639439883	2	498.2159118652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEIEHHEM_	ENSG00000163939|ENST00000707071|PBRM1;nc|ENSG00000163939|Q86U86-2|PBRM1;nc|ENSG00000163939|Q86U86-3|PBRM1;nc|ENSG00000163939|Q86U86-4|PBRM1;nc|ENSG00000163939|Q86U86-5|PBRM1;nc|ENSG00000163939|Q86U86-6|PBRM1;nc|ENSG00000163939|Q86U86-7|PBRM1;nc|ENSG00000163939|Q86U86-8|PBRM1;nc|ENSG00000163939|Q86U86-9|PBRM1;nc|ENSG00000163939|Q86U86|PBRM1;PBRM1|p.H1521Pfs*95|1|0.12|ENSG00000163939|chr3:52554771-52554772|-/G|frameshift_variant;PBRM1|p.K991Nfs*23|1|0.28|ENSG00000163939|chr3:52587503-52587503|T/-|frameshift_variant;PBRM1|p.L1349Wfs*35|1|0.5|ENSG00000163939|chr3:52563324-52563324|G/-|frameshift_variant;PBRM1|p.N955Tfs*59|2|0.31|ENSG00000163939|chr3:52589171-52589171|T/-|frameshift_variant	102.7733458925114	0.2491487235419157	2				NaN	NaN	0	NaN	3110	2776	5886
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5889	19.491	NaN	13474	30	0	3631.4	0.106			+	-1	EKGGGQAFC	9	57	477.2121655609692	952.4097781887384	2	477.2120361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_EKGGGQAFC(Carbamidomethyl (C))_	REV__ENSG00000144481|ENST00000324695|TRPM8	30.317721548370564	0.5199124245378496	2				NaN	NaN	0	NaN	3111	2776	5886
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5890	19.492	NaN	6276.3	30	0	1890.8	0.106	+			28670	NLSHSQSL	8	64	443.2246590564656	884.4347651797312	2	443.2243957519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NLSHSQSL_	ENST00000276055.3_1_X:46457237-46457324:+|nuORF	76.7741389293348	0.3504530765139327	2				NaN	NaN	0	NaN	3112	2776	5886
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5891	19.494	NaN	10113	30	0	1123.6	0.106	+			9024	EGDLRLTGR	9	90	508.7777301167481	1015.5409073002962	2	508.7778015136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EGDLRLTGR_	ENST00000299767.9_1_12:104324213-104324297:+|nuORF	42.396135135203025	0.392153681582562	2				NaN	NaN	0	NaN	3113	2776	5886
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5892	19.496	NaN	5957.9	30	0	838.16	0.106	+			19971	KEGVKDTPQ	9	61	501.26684365998193	1000.5191343867639	2	501.26654052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KEGVKDTPQ_	ENSG00000144161|ENST00000409573|ZC3H8	61.691277971877994	0.19951612995419254	2				NaN	NaN	0	NaN	3114	2776	5886
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5893	19.498	NaN	7077.6	30	0	1065.7	0.035	+			39711	STIPPHVQK	9	68	503.7874821389092	1005.5604113446184	2	503.78729248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STIPPHVQK_	ENSG00000163513|ENST00000295754|TGFBR2;nc|ENSG00000163513|P37173-2|TGFBR2;nc|ENSG00000163513|P37173-3|TGFBR2;TGFBR2|p.H523Rfs*19|1|0.27|ENSG00000163513|chr3:30691458-30691459|-/GACC|frameshift_variant	32.81241826257853	0.4965981579233955	2				NaN	NaN	0	NaN	3115	2776	5886
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5909	19.53	NaN	33374	30	0	7421.4	0.214				-1	LEPALRPGL	9	81	336.5339368598552	1006.5799811797656	3	336.53424072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LEPALRPGL_	ENST00000368605.2_1_6:116783229-116784525:+|nuORF	40.5726180659479	0.4135428067754104	2				NaN	NaN	0	NaN	3128	2779	5908
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5910	19.534	NaN	11120	30	0	997.64	0.106	+			12510	GEEQNKEAL	9	78	509.2459779969128	1016.4774030606256	2	509.24603271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEEQNKEAL_	ENSG00000108953|ENST00000264335|YWHAE;ENST00000435487.1_1_7:56635601-56635700:-|nuORF;nc|ENSG00000108953|P62258-2|YWHAE	85.86182877749512	0.07653218437724067	2				NaN	NaN	0	NaN	3129	2779	5908
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5911	19.536	NaN	9120	30	0	4629.9	0.106	+			25295	LNYIGLLDC	9	65	512.2643654819367	NaN	0	512.264404296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LNYIGLLDC_	ENSG00000125871|ENST00000377710|MGME1	38.80614096846853	0.28164298475537564	2				NaN	NaN	0	NaN	3130	2779	5908
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5912	19.538	NaN	24675	30	0	2471.6	0.106	+			24197	LEQQEREKL	9	85	586.8172968225329	1171.6200407118656	2	586.8173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LEQQEREKL_	ENSG00000072571|ENST00000393915|HMMR;HMMR|p.I537Nfs*3|1|0.34|ENSG00000072571|chr5:163483093-163483094|-/A|frameshift_variant;HMMR|p.K666Nfs*11|1|0.36|ENSG00000072571|chr5:163490420-163490420|A/-|frameshift_variant;nc|ENSG00000072571|O75330-2|HMMR;nc|ENSG00000072571|O75330-4|HMMR;nc|ENSG00000072571|O75330|HMMR	114.8945686534367	0.024290463251177924	2				NaN	NaN	0	NaN	3131	2779	5908
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5913	19.54	NaN	8005	30	0	2422.9	0.106			+	-1	GCGGCQGFY	9	62	474.6690894039198	947.3236258746397	2	474.6692199707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_GC(Carbamidomethyl (C))GGCQGFY_	REV__ENSG00000087077|ENST00000200457|TRIP6	40.5726180659479	0.4135428067754104	2				NaN	NaN	0	NaN	3132	2779	5908
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5914	19.542	NaN	4830.5	30	0	365.45	0.036	+			26909	LYAMVTTML	9	69	353.5135390622737	1057.5187877870212	3	353.513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_LYAM(Oxidation (M))VTTML_	ENSG00000168828|ENST00000377981|OR13J1	42.396135135203025	0.392153681582562	2				NaN	NaN	0	NaN	3133	2779	5908
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5915	19.542	NaN	6212.9	30	0	1097.4	0.142	+			38250	SQNGEFMTHK	10	74	589.7665059990903	1177.5184590649806	2	589.7666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SQNGEFMTHK_	CALD1|p.S660Afs*12|1|0.15|ENSG00000122786|chr7:134958108-134958108|A/-|frameshift_variant;ENSG00000122786|ENST00000361675|CALD1;ENST00000482470.5_1_7:134552484-134644871:+|nuORF;nc|ENSG00000122786|Q05682-2|CALD1;nc|ENSG00000122786|Q05682-3|CALD1;nc|ENSG00000122786|Q05682-4|CALD1;nc|ENSG00000122786|Q05682-5|CALD1;nc|ENSG00000122786|Q05682-6|CALD1	42.242577148874844	0.5284808555555522	2				NaN	NaN	0	NaN	3134	2779	5908
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5931	19.577	NaN	61636	30	0	6935.5	0.211				-1	TWYRHYRCCRQ	11	105	835.8753773531979	1669.7362017731957	2	835.8722534179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))TWYRHYRC(Carbamidomethyl (C))CRQ_	ENST00000448464.6_1_8:95941986-95942052:-|nuORF	2.92943323627438	0.8718097890272747	2				NaN	NaN	0	NaN	3147	2782	5930
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5932	19.58	NaN	21536	30	0	3754.8	0.106	+			35527	SAVGTIVKK	9	79	451.78719322883427	901.5598335244686	2	451.7869567871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAVGTIVKK_	ENSG00000161526|ENST00000584667|SAP30BP;ENST00000293208.13_1_17:73701692-73702598:+|nuORF;ENST00000578756.5_1_17:73699860-73702598:+|nuORF;ENST00000579005.1_1_17:73702284-73702598:+|nuORF;ENST00000580322.5_1_17:73702024-73702598:+|nuORF;ENST00000580601.5_1_17:73689468-73702598:+|nuORF;ENST00000583329.5_1_17:73699767-73702598:+|nuORF;ENST00000584557.1_1_17:73702349-73702598:+|nuORF;nc|ENSG00000161526|Q9UHR5-2|SAP30BP	129.42129120953632	0.01549634589885217	2				NaN	NaN	0	NaN	3148	2782	5930
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5933	19.583	NaN	15427	30	0	2029.7	0.106	+			12857	GEPVNGRHTL	10	84	540.2830282503778	1078.5515035675555	2	540.7764282226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEPVNGRHTL_	ENSG00000117298|ENST00000374893|ECE1;nc|ENSG00000117298|P42892-2|ECE1;nc|ENSG00000117298|P42892-3|ECE1;nc|ENSG00000117298|P42892-4|ECE1	46.45678178249821	0.4896490706773647	2				NaN	NaN	0	NaN	3149	2782	5930
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5934	19.584	NaN	17285	30	0	8167.7	0.106				-1	AVEGLRTLCV	10	59	373.20577031731455	1116.5954815521436	3	373.20599365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_AVEGLRTLC(Carbamidomethyl (C))V_	ENSG00000068650|ENST00000375645|ATP11A;ENST00000459908.5_1_13:113439469-113512287:+|nuORF	35.15202426646627	0.5927656479315102	2				NaN	NaN	0	NaN	3150	2782	5930
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5935	19.586	NaN	30856	30	0	3835.5	0.106	+			15496	GVANALAHK	9	83	440.75359810517233	879.4926432771447	2	440.7534484863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GVANALAHK_	ENSG00000223609|ENST00000650601|HBD;ENSG00000244734|ENST00000335295|HBB	143.10689835833298	0.00902249513149409	2				NaN	NaN	0	NaN	3151	2782	5930
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5936	19.588	NaN	12651	30	0	1685.4	0.036	+			5506	AVAEGAKNVMK	11	78	559.3052673679166	1116.595981802633	2	559.3057861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AVAEGAKNVMK_	ENSG00000065243|ENST00000370521|PKN2;nc|ENSG00000065243|Q16513-2|PKN2;nc|ENSG00000065243|Q16513-3|PKN2;nc|ENSG00000065243|Q16513-4|PKN2	93.5975768576971	0.08404719173293068	2				NaN	NaN	0	NaN	3152	2782	5930
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5937	19.589	NaN	33719	30	0	4438.7	0.143	+			49135	VVMAADRSLKK	11	99	609.3557661538356	1216.696979374471	2	609.3554077148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VVMAADRSLKK_	ENSG00000189241|ENST00000368608|TSPYL1	160.7221532484678	5.2657678129832264E-05	2				NaN	NaN	0	NaN	3153	2782	5930
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5955	19.625	NaN	68911	30	0	18615	0.214	+			5410	ATYHGSFSTK	10	91	366.84514217468615	1097.5135971242585	3	366.84527587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATYHGSFSTK_	ENSG00000163359|ENST00000295550|COL6A3;ENST00000491769.1_1_2:238233419-238250825:-|nuORF;ENST00000493608.1_1_2:238242084-238243404:-|nuORF;nc|ENSG00000163359|P12111-2|COL6A3;nc|ENSG00000163359|P12111-4|COL6A3	58.62960593111931	0.3783037861296717	2				NaN	NaN	0	NaN	3168	2785	5954
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5956	19.629	NaN	15054	30	0	3692.9	0.106	+			34577	RVMKALVNR	9	82	543.8320496813399	1085.6495464294796	2	543.8321533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RVMKALVNR_	ENSG00000149136|ENST00000278412|SSRP1;ENST00000293880.9_1_11:57098199-57100416:-|nuORF	109.47833844074708	0.029530294723441826	2				NaN	NaN	0	NaN	3169	2785	5954
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5957	19.631	NaN	32080	30	0	2831.8	0.106	+			16487	HETSKMKVL	9	108	358.1984875994665	1071.5736333985994	3	358.1988220214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HETSKMKVL_	ENSG00000067445|ENST00000173898|TRO;ENSG00000179222|ENST00000326587|MAGED1;ENST00000475183.1_1_X:54953428-54957230:+|nuORF;ENST00000492706.5_1_X:54953428-54957450:+|nuORF;ENST00000494718.5_1_X:51643260-51645023:+|nuORF;nc|ENSG00000067445|Q12816-2|TRO;nc|ENSG00000067445|Q12816-3|TRO;nc|ENSG00000067445|Q12816-4|TRO;nc|ENSG00000067445|Q12816-5|TRO;nc|ENSG00000179222|Q9Y5V3-2|MAGED1;TRO|p.S1034Rfs*10|1|0.07|ENSG00000067445|chrX:54929826-54929826|C/-|frameshift_variant	51.33545320467046	0.2872990594074956	2				NaN	NaN	0	NaN	3170	2785	5954
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5958	19.633	NaN	6367.6	30	0	830.09	0.106	+			1557	AGGAPRVP	8	63	362.7085523135553	723.4025516939106	2	362.7086486816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AGGAPRVP_	ENST00000589764.1_1_18:12068096-12068183:-|nuORF	54.76467175910256	0.5536104764165384	2				NaN	NaN	0	NaN	3171	2785	5954
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5959	19.635	NaN	20786	30	0	1608.8	0.106	+			36812	SIEKGGSLPK	10	86	508.292938802955	1014.57132467271	2	508.29296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SIEKGGSLPK_	ENSG00000181163|ENST00000296930|NPM1;nc|ENSG00000181163|P06748-2|NPM1	117.5257442709337	0.03082425562130952	2				NaN	NaN	0	NaN	3172	2785	5954
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5960	19.636	NaN	12206	30	0	2099.9	0.106			+	-1	KNCTASAQGSP	11	72	560.7543041581165	NaN	0	560.8199462890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_KNC(Carbamidomethyl (C))TASAQGSP_	REV__ENSG00000134917|ENST00000257359|ADAMTS8;REV__ENST00000531752.1_1_11:130275455-130281537:-|nuORF	33.921630207806714	0.41424167740351664	2				NaN	NaN	0	NaN	3173	2785	5954
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5961	19.638	NaN	13065	30	0	1920.4	0.037	+			38367	SRRRRSMDP	9	77	580.8070979369261	1159.599642940652	2	580.8069458007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SRRRRSMDP_	ADAMTS6|p.D77V|1|0.11|ENSG00000049192|chr5:65471010-65471010|T/A|missense_variant;ADAMTS6|p.D907Gfs*10|1|0.25|ENSG00000049192|chr5:65188206-65188207|-/C|frameshift_variant;ADAMTS6|p.E952Sfs*89|1|0.1|ENSG00000049192|chr5:65188073-65188073|T/-|frameshift_variant;ADAMTS6|p.I1077Ffs*10|1|0.37|ENSG00000049192|chr5:65170633-65170633|G/-|frameshift_variant;ENSG00000049192|ENST00000381055|ADAMTS6;ENST00000470597.5_1_5:64558740-64769500:-|nuORF;nc|ENSG00000049192|Q9UKP5-2|ADAMTS6;nc|ENSG00000049192|Q9UKP5-3|ADAMTS6;nc|ENSG00000049192|Q9UKP5-4|ADAMTS6	54.776311868738084	0.25715957988447635	2				NaN	NaN	0	NaN	3174	2785	5954
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5977	19.669	NaN	27073	30	0	3175.8	0.214	+			26823	LVSTPVRTK	9	83	500.81105659265125	999.6075602521025	2	500.81097412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LVSTPVRTK_	ENSG00000141027|ENST00000268712|NCOR1;ENST00000464381.5_1_17:15935612-15961439:-|nuORF;ENST00000470782.5_1_17:15935612-15971511:-|nuORF;ENST00000472189.1_1_17:15960700-15961247:-|nuORF;nc|ENSG00000141027|O75376-2|NCOR1	63.53385203322761	0.18415635464017938	2				NaN	NaN	0	NaN	3187	2788	5976
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5978	19.673	NaN	13352	30	0	2700.4	0.106	+			49091	VVLEKAMHK	9	74	527.8074691125095	1053.6003852918188	2	527.8076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVLEKAMHK_	ENSG00000132669|ENST00000255006|RIN2;nc|ENSG00000132669|Q8WYP3-2|RIN2;RIN2|p.D879Gfs*3|1|0.16|ENSG00000132669|chr20:20000731-20000732|-/G|frameshift_variant	104.0567914643314	0.03506238181059741	2				NaN	NaN	0	NaN	3188	2788	5976
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5979	19.675	NaN	15943	30	0	1530	0.106	+			5623	AVCTLIHRK	9	83	549.3165958680427	1096.6186388028852	2	549.3165893554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_AVC(Carbamidomethyl (C))TLIHRK_	ENSG00000015568|ENST00000016946|RGPD5;ENSG00000153165|ENST00000409886|RGPD3;ENSG00000153201|ENST00000283195|RANBP2;ENSG00000169629|ENST00000302558|RGPD8;ENSG00000183054|ENST00000329516|RGPD6;ENSG00000185304|ENST00000398146|RGPD2;ENSG00000187627|ENST00000641458|RGPD1;ENSG00000196862|ENST00000408999|RGPD4;ENST00000495506.1_1_2:109368070-109368160:+|nuORF;ENST00000522286.5_1_2:113158797-113161561:-|nuORF;nc|ENSG00000183054|Q99666-2|RGPD5;nc|ENSG00000187627|P0DJD0|RGPD1;RANBP2|p.A864Lfs*3|1|0.3|ENSG00000153201|chr2:108758533-108758533|G/-|frameshift_variant;RANBP2|p.C2737Vfs*35|1|0.18|ENSG00000153201|chr2:108772957-108772957|T/-|frameshift_variant;RANBP2|p.F3068Lfs*10|1|0.06|ENSG00000153201|chr2:108782692-108782692|T/-|frameshift_variant;RANBP2|p.H3114Sfs*18|1|0.33|ENSG00000153201|chr2:108782827-108782828|-/T|frameshift_variant;RANBP2|p.K1989Nfs*9|1|0.05|ENSG00000153201|chr2:108766505-108766506|-/TATCCTG|frameshift_variant;RANBP2|p.K2576Nfs*63|2|0.22|ENSG00000153201|chr2:108768262-108768262|A/-|frameshift_variant;RANBP2|p.S1486Rfs*51|1|0.05|ENSG00000153201|chr2:108764996-108764997|-/ATTTTGTATTC|frameshift_variant;RANBP2|p.W532R|1|0.12|ENSG00000153201|chr2:108751666-108751666|T/C|missense_variant;RGPD2|p.F1350Lfs*25|1|0.25|ENSG00000185304|chr2:87782974-87782974|A/-|frameshift_variant;RGPD3|p.V1441*|1|0.45|ENSG00000153165|chr2:106423647-106423647|T/-|frameshift_variant;RGPD4|p.K568Nfs*33|1|0.14|ENSG00000196862|chr2:107859787-107859787|A/-|frameshift_variant	71.87747018426188	0.13267044672804276	2				NaN	NaN	0	NaN	3189	2788	5976
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5980	19.677	NaN	14350	30	0	5977.9	0.106	+			36813	SIEKGGSLPK	10	69	339.1973655350836	1014.5702672054508	3	339.1975402832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SIEKGGSLPK_	ENSG00000181163|ENST00000296930|NPM1;nc|ENSG00000181163|P06748-2|NPM1	31.634271133179894	0.6214930414500597	2				NaN	NaN	0	NaN	3190	2788	5976
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5981	19.679	NaN	5883.3	30	0	1292.8	0.106			+	15503	GVAQCIGSI	9	68	452.73137248772935	903.4481920422587	2	453.2319641113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_GVAQC(Carbamidomethyl (C))IGSI_	REV__ADAMTSL3|p.F1172Yfs*20|1|0.12|ENSG00000156218|chr15:83983142-83983143|-/A|frameshift_variant;REV__ADAMTSL3|p.F477*|1|0.29|ENSG00000156218|chr15:83892848-83892849|TG/-|frameshift_variant;REV__ADAMTSL3|p.H1300Ifs*18|1|0.33|ENSG00000156218|chr15:83991138-83991138|C/-|frameshift_variant;REV__ADAMTSL3|p.N1166Kfs*26|1|0.4|ENSG00000156218|chr15:83983119-83983120|-/A|frameshift_variant;REV__ADAMTSL3|p.R1207Gfs*32|1|0.3|ENSG00000156218|chr15:83983243-83983243|A/-|frameshift_variant;REV__ENSG00000156218|ENST00000286744|ADAMTSL3;REV__ENST00000561483.5_1_15:84323016-84694242:+|nuORF;REV__ENST00000569510.5_1_15:84323016-84530322:+|nuORF;REV__nc|ENSG00000156218|P82987-2|ADAMTSL3	45.9519527083369	0.35044536499095585	2				NaN	NaN	0	NaN	3191	2788	5976
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5982	19.681	NaN	9098.5	30	0	1647.6	0.036	+			15273	GTTMYIHNK	9	82	532.7634763561149	1063.5123997790297	2	532.7633666992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTTMYIHNK_	ENSG00000146433|ENST00000684151|TMEM181;nc|ENSG00000146433|Q9P2C4-1|TMEM181	79.71258880314673	0.09879134589249085	2				NaN	NaN	0	NaN	3192	2788	5976
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5983	19.681	NaN	9041.7	30	0	939.01	0.14			+	20816	KIFIESRP	8	70	495.2923611034993	988.5701692737986	2	495.292236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KIFIESRP_	REV__ENST00000475582.5_1_2:27590663-27590978:-|nuORF	51.33545320467046	0.5859736979383976	2				NaN	NaN	0	NaN	3193	2788	5976
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5997	19.712	NaN	16271	30	0	3346.8	0.214	+			39458	STEPPYSQK	9	82	518.7509918586563	1035.4874307841126	2	518.7511596679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STEPPYSQK_	EEF1A1|p.P263Lfs*27|1|0.36|ENSG00000156508|chr6:73518595-73518595|G/-|frameshift_variant;ENSG00000156508|ENST00000309268|EEF1A1;ENST00000359165.5_1_12:19610040-19610154:-|nuORF;ENST00000401075.3_1_1:31961199-31961370:-|nuORF;ENST00000434005.1_1_7:22551057-22551540:-|nuORF;ENST00000443590.1_1_2:107314616-107314670:-|nuORF;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	67.49366992349736	0.1516260258713357	2				NaN	NaN	0	NaN	3204	2791	5996
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5998	19.716	NaN	15691	30	0	1497.1	0.106	+			47931	VSMDNSNKYTK	11	86	643.8053909848579	1285.5962290365158	2	643.8058471679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSMDNSNKYTK_	ENSG00000118689|ENST00000406360|FOXO3;ENST00000395675.4_1_17:18575090-18575600:-|nuORF;nc|ENSG00000118689|O43524-2|FOXO3	201.61192446435922	1.963053260341711E-08	2				NaN	NaN	0	NaN	3205	2791	5996
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	5999	19.718	NaN	20956	30	0	11156	0.106	+			48733	VTVDPKYHPK	10	60	395.2205831175153	1182.639919952746	3	395.2203674316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTVDPKYHPK_	ENSG00000115677|ENST00000310931|HDLBP;ENST00000487169.5_1_2:242169444-242174670:-|nuORF;nc|ENSG00000115677|Q00341-2|HDLBP	41.42661286455405	0.5359995577334734	2				NaN	NaN	0	NaN	3206	2791	5996
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6000	19.72	NaN	12013	30	0	1421.7	0.106	+			22963	KVQTEVLQK	9	79	536.8216135729923	1071.6286742127845	2	536.8220825195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KVQTEVLQK_	ENSG00000117395|ENST00000236051|EBNA1BP2;ENST00000463906.1_1_1:43630116-43636618:-|nuORF	112.10723106719422	0.02684780151337622	2				NaN	NaN	0	NaN	3207	2791	5996
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6001	19.721	NaN	7651.9	30	0	865.15	0.106	+			21807	KRAVEITGA	9	74	472.77970969910257	943.5448664650052	2	472.7978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KRAVEITGA_	ENSG00000108840|ENST00000682912|HDAC5;HDAC5|p.E566Gfs*15|1|0.29|ENSG00000108840|chr17:44087599-44087600|-/C|frameshift_variant;HDAC5|p.I932Hfs*24|1|0.42|ENSG00000108840|chr17:44080432-44080433|-/G|frameshift_variant;HDAC5|p.I932Lfs*14|3|0.32|ENSG00000108840|chr17:44080433-44080433|G/-|frameshift_variant;nc|ENSG00000108840|Q9UQL6-2|HDAC5;nc|ENSG00000108840|Q9UQL6-3|HDAC5	37.81151784470057	0.4459294069877048	2				NaN	NaN	0	NaN	3208	2791	5996
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6002	19.723	NaN	4951.5	30	0	996.42	0.042				-1	TIINWEWEFEM	11	78	757.3379375612038	1512.6613221892076	2	757.3350219726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_TIINWEWEFEM(Oxidation (M))_	CHD4|p.R792W|1|0.07|ENSG00000111642|chr12:6593556-6593556|G/A|missense_variant	22.579656572578934	0.7529490144093228	2				NaN	NaN	0	NaN	3209	2791	5996
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6003	19.724	NaN	9881.2	30	0	1111.8	0.142			+	17426	IATALHVAGA	10	69	462.2691101921423	922.5236674510846	2	462.2688293457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IATALHVAGA_	REV__ENSG00000145020|ENST00000273588|AMT;REV__ENST00000465925.6_2_3:49454975-49456881:-|nuORF;REV__ENST00000480957.6_2_3:49456386-49456881:-|nuORF;REV__nc|ENSG00000145020|P48728-2|AMT;REV__nc|ENSG00000145020|P48728-3|AMT;REV__nc|ENSG00000145020|P48728-4|AMT	73.97473282117947	0.24484687617201792	2				NaN	NaN	0	NaN	3210	2791	5996
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6015	19.751	NaN	31693	30	0	6488.5	0.214	+			44308	TSEGGKCRR	9	77	525.759056286675	1049.50355964015	2	525.759033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_TSEGGKC(Carbamidomethyl (C))RR_	ENST00000220244.7_1_15:81241617-81241845:+|nuORF	63.30626980617807	0.18605348971131092	2				NaN	NaN	0	NaN	3219	2794	6014
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6016	19.754	NaN	21934	30	0	2318.2	0.106	+			6088	AVNIVCHSK	9	87	485.7606224985602	969.5066920639205	2	485.7604064941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVNIVCHSK_	ENSG00000159352|ENST00000368884|PSMD4;ENST00000461434.1_1_1:151227258-151234901:+|nuORF;ENST00000462970.5_1_1:151227258-151237442:+|nuORF;nc|ENSG00000159352|P55036-2|PSMD4	109.82975700811294	0.02917171107062681	2				NaN	NaN	0	NaN	3220	2794	6014
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6017	19.756	NaN	18357	30	0	1936.3	0.106	+			11450	FNDPNAKEM	9	81	541.2347440072232	1080.4549350812463	2	541.2349243164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_FNDPNAKEM(Oxidation (M))_	ENSG00000056097|ENST00000265069|ZFR	155.5846463517096	0.005567437401040498	2				NaN	NaN	0	NaN	3221	2794	6014
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6018	19.758	NaN	13491	30	0	1948	0.106	+			5447	ATYSVGMQK	9	69	500.7410761640303	999.4675993948606	2	500.74176025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_ATYSVGM(Oxidation (M))QK_	ENSG00000131941|ENST00000254260|RHPN2;ENST00000592247.1_1_19:33470904-33481620:-|nuORF;nc|ENSG00000131941|Q8IUC4-2|RHPN2;nc|ENSG00000258628|A8MT19|RHPN2P1	75.04331003522576	0.118981335847003	2				NaN	NaN	0	NaN	3222	2794	6014
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6019	19.76	NaN	49812	30	0	6550	0.106	+			42057	SYAKSTQRF	9	105	544.2804920826693	1086.5464312321385	2	544.2803955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SYAKSTQRF_	ENST00000430580.6_1_1:16939836-16939869:-|nuORF	142.36107225718385	0.009372392051035914	2				NaN	NaN	0	NaN	3223	2794	6014
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6020	19.762	NaN	21066	30	0	5623	0.106	+			14222	GSSPVAMQK	9	69	452.73137248772935	903.4481920422587	2	452.7312927246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GSSPVAMQK_	ENSG00000035403|ENST00000211998|VCL;nc|ENSG00000035403|P18206-2|VCL	87.69643885390035	0.07135982304947239	2				NaN	NaN	0	NaN	3224	2794	6014
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6021	19.763	NaN	37632	30	0	4653	0.036	+			42169	SYTLGVHVNQ	10	100	559.285820093222	1116.557087253244	2	559.2859497070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SYTLGVHVNQ_	ENSG00000077514|ENST00000263681|POLD3;ENST00000532497.5_1_11:74303703-74322559:+|nuORF;ENST00000532784.5_1_11:74303703-74306426:+|nuORF;POLD3|p.I262*|1|0.25|ENSG00000077514|chr11:74625453-74625453|A/-|frameshift_variant;POLD3|p.R300Gfs*8|2|0.38|ENSG00000077514|chr11:74625564-74625565|AA/-|frameshift_variant	85.86182877749512	0.1547657473298402	2				NaN	NaN	0	NaN	3225	2794	6014
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6033	19.789	NaN	161540	30	0	30219	0.161	+			5862	AVIQVGKEK	9	97	486.29783937987423	970.5811258265485	2	486.2978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVIQVGKEK_	ENSG00000156675|ENST00000330843|RAB11FIP1;nc|ENSG00000156675|Q6WKZ4-3|RAB11FIP1;nc|ENSG00000156675|Q6WKZ4-5|RAB11FIP1;RAB11FIP1|p.E639Rfs*27|1|0.12|ENSG00000156675|chr8:37872887-37872888|-/T|frameshift_variant;RAB11FIP1|p.Q714Tfs*22|1|0.3|ENSG00000156675|chr8:37872662-37872663|-/T|frameshift_variant	172.24860141594272	0.002383092361811508	2				NaN	NaN	0	NaN	3234	2797	6032
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6034	19.792	NaN	105990	30	0	73343	0.106	+			5863	AVIQVGKEK	9	97	324.53411033758596	970.580501612958	3	324.5343933105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVIQVGKEK_	ENSG00000156675|ENST00000330843|RAB11FIP1;nc|ENSG00000156675|Q6WKZ4-3|RAB11FIP1;nc|ENSG00000156675|Q6WKZ4-5|RAB11FIP1;RAB11FIP1|p.E639Rfs*27|1|0.12|ENSG00000156675|chr8:37872887-37872888|-/T|frameshift_variant;RAB11FIP1|p.Q714Tfs*22|1|0.3|ENSG00000156675|chr8:37872662-37872663|-/T|frameshift_variant	58.78195531508484	0.22376836668196862	2				NaN	NaN	0	NaN	3235	2797	6032
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6035	19.794	NaN	24339	30	0	11760	0.106	+			42058	SYAKSTQRF	9	70	363.189091441727	1086.545444925381	3	363.1893005371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SYAKSTQRF_	ENST00000430580.6_1_1:16939836-16939869:-|nuORF	56.43379154798735	0.2433427591689151	2				NaN	NaN	0	NaN	3236	2797	6032
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6036	19.796	NaN	19287	30	0	4980.3	0.106			+	24939	LKVAGGEK	8	67	401.24516978289955	800.4757866325991	2	401.2451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LKVAGGEK_	REV__EML5|p.N1682Mfs*7|1|0.04|ENSG00000165521|chr14:88621246-88621246|T/-|frameshift_variant;REV__EML6|p.N1675Mfs*7|2|0.32|ENSG00000214595|chr2:54962572-54962572|A/-|frameshift_variant;REV__EML6|p.R1767Efs*19|1|0.37|ENSG00000214595|chr2:54964127-54964127|C/-|frameshift_variant;REV__ENSG00000165521|ENST00000554922|EML5;REV__ENSG00000214595|ENST00000356458|EML6;REV__ENST00000490828.5_1_2:55184973-55193987:+|nuORF;REV__ENST00000553281.5_1_14:89088194-89171927:-|nuORF;REV__nc|ENSG00000165521|Q05BV3|EML5;REV__nc|ENSG00000214595|Q6ZMW3-2|EML6	129.68262048586715	0.2207121622506348	2				NaN	NaN	0	NaN	3237	2797	6032
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6037	19.798	NaN	34726	30	0	10848	0.106	+			14560	GTFGKVKVGK	10	95	340.87797573454424	1019.6120978038327	3	340.8782043457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTFGKVKVGK_	ENSG00000132356|ENST00000397128|PRKAA1;ENST00000397006.2_1_5:40777312-40798264:-|nuORF;ENST00000511248.1_1_5:40777545-40798228:-|nuORF;nc|ENSG00000132356|Q13131-2|PRKAA1	56.632244143249146	0.3964695498866976	2				NaN	NaN	0	NaN	3238	2797	6032
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6038	19.799	NaN	9534.5	30	0	2842	0.106			+	42164	SYTKGTLHPN	10	54	373.1925968103747	1116.5559610313242	3	373.1927490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SYTKGTLHPN_	REV__ENSG00000112902|ENST00000382496|SEMA5A	29.550750289552195	0.6385079145554603	2				NaN	NaN	0	NaN	3239	2797	6032
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6039	19.801	NaN	4188.6	30	0	1039.1	0.032	+			23754	LCCSSLGL	8	52	398.1903643857844	794.3661758383688	2	398.1903991699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LCCSSLGL_	ENST00000333319.6_1_7:156432207-156432471:-|nuORF	35.200714571348534	0.6875396545722289	2				NaN	NaN	0	NaN	3240	2797	6032
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6052	19.829	NaN	28510	30	0	3251.4	0.214	+			5448	ATYSVGMQK	9	84	500.7410761640303	999.4675993948606	2	501.2405090332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ATYSVGM(Oxidation (M))QK_	ENSG00000131941|ENST00000254260|RHPN2;ENST00000592247.1_1_19:33470904-33481620:-|nuORF;nc|ENSG00000131941|Q8IUC4-2|RHPN2;nc|ENSG00000258628|A8MT19|RHPN2P1	87.69643885390035	0.07135982304947239	2				NaN	NaN	0	NaN	3250	2800	6051
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6053	19.832	NaN	25413	30	0	5040.5	0.106	+			3447	ASQQNATVLK	10	88	530.2932038411619	1058.5718547491238	2	530.2935180664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASQQNATVLK_	ENST00000427574.6_1_11:76156149-76164398:+|nuORF	187.50397467658743	0.0004846318765806019	2				NaN	NaN	0	NaN	3251	2800	6051
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6054	19.834	NaN	32729	30	0	5433.2	0.106				-1	RRLCPGQTL	9	85	550.8031698098049	1099.5917866864097	2	550.8035278320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_RRLC(Carbamidomethyl (C))PGQTL_	ENSG00000129158|ENST00000265965|SERGEF;ENST00000527494.5_1_11:17899771-18022052:-|nuORF;nc|ENSG00000129158|Q9UGK8-2|SERGEF	32.81241826257853	0.4965981579233955	2				NaN	NaN	0	NaN	3252	2800	6051
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6055	19.836	NaN	38382	30	0	8793.6	0.106			+	9054	EGGGDDRQGW	10	73	538.7232339668487	1075.4319150004974	2	538.7234497070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EGGGDDRQGW_	REV__CON__ENSEMBL:ENSBTAP00000018574	71.87747018426188	0.26198133118427214	2				NaN	NaN	0	NaN	3253	2800	6051
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6056	19.838	NaN	55134	30	0	6758.9	0.106	+			38854	SSNSMQTIQK	10	87	562.2741789582312	1122.5338049832624	2	562.2745361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSNSMQTIQK_	ENSG00000111057|ENST00000388835|KRT18;ENST00000446618.1_1_22:19245879-19246326:+|nuORF;ENST00000447938.1_1_21:21797263-21797497:-|nuORF;ENST00000506277.1_1_5:36886275-36886596:+|nuORF	232.72021466706244	8.392032448800875E-16	2				NaN	NaN	0	NaN	3254	2800	6051
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6057	19.84	NaN	27101	30	0	10935	0.106	+			27885	MTLVSSPLPVG	11	64	367.53761992833824	1099.5910303852147	3	367.5379333496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MTLVSSPLPVG_	ADNP2|p.K1045Nfs*29|1|0.42|ENSG00000101544|chr18:80138543-80138543|A/-|frameshift_variant;ADNP2|p.P500Qfs*7|1|0.18|ENSG00000101544|chr18:80136908-80136908|C/-|frameshift_variant;ADNP2|p.P628Lfs*39|1|0.11|ENSG00000101544|chr18:80137292-80137292|C/-|frameshift_variant;ENSG00000101544|ENST00000262198|ADNP2	25.125986553469783	0.7262400895305658	2				NaN	NaN	0	NaN	3255	2800	6051
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6058	19.841	NaN	11573	30	0	1291.3	0.034	+			15493	GVALALRKK	9	70	478.3240004188982	954.6334479045964	2	478.32403564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GVALALRKK_	ENSG00000099968|ENST00000317582|BCL2L13;ENST00000485631.1_1_22:18189492-18210297:+|nuORF;nc|ENSG00000099968|Q9BXK5-4|BCL2L13	60.97194046774394	0.20551255781574032	2				NaN	NaN	0	NaN	3256	2800	6051
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6076	19.879	NaN	19933	30	0	3251.4	0.214	+			43415	TGKISFKNL	9	83	336.5339368598552	1006.5799811797656	3	336.53424072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TGKISFKNL_	ENSG00000147400|ENST00000370277|CETN2;ENSG00000177143|ENST00000327228|CETN1;ENST00000493482.1_1_X:151996387-151997293:-|nuORF	30.503639358989545	0.5181749237905803	2				NaN	NaN	0	NaN	3271	2803	6075
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6077	19.883	NaN	55153	30	0	7517.2	0.106	+			2535	AQAESLRYK	9	97	533.2880977520737	1064.5616425709472	2	533.287841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AQAESLRYK_	ENSG00000149273|ENST00000531188|RPS3;ENST00000433853.1_1_3:183867695-183868220:+|nuORF;ENST00000487417.1_1_12:62415587-62415818:-|nuORF;nc|ENSG00000149273|P23396-2|RPS3;RPS3|p.L110I|1|0.35|ENSG00000149273|chr11:75402424-75402424|C/A|missense_variant	162.63603312974413	0.004023911058767669	2				NaN	NaN	0	NaN	3272	2803	6075
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6078	19.885	NaN	60869	30	0	30148	0.106	+			40619	SVAKTILKR	9	89	339.2253777638636	NaN	0	339.2255554199219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVAKTILKR_	ENSG00000114978|ENST00000396049|MOB1A;ENSG00000173542|ENST00000309395|MOB1B;ENST00000497054.5_1_2:74386211-74405801:-|nuORF;nc|ENSG00000173542|Q7L9L4-2|MOB1B	89.02883481214508	0.043554178677197526	2				NaN	NaN	0	NaN	3273	2803	6075
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6079	19.887	NaN	6355.7	30	0	571.89	0.106	+			3681	ASYVASTKYQK	11	78	623.3269188420531	1244.6392847509062	2	623.3274536132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASYVASTKYQK_	ENSG00000044115|ENST00000302763|CTNNA1;ENSG00000066032|ENST00000402739|CTNNA2;ENST00000522792.1_1_5:138268134-138269775:+|nuORF;nc|ENSG00000044115|P35221-2|CTNNA1;nc|ENSG00000044115|P35221-3|CTNNA1;nc|ENSG00000066032|P26232-2|CTNNA2;nc|ENSG00000066032|P26232-3|CTNNA2;nc|ENSG00000066032|P26232-4|CTNNA2;nc|ENSG00000066032|P26232-5|CTNNA2;nc|ENSG00000066032|P26232-6|CTNNA2	104.06999374311218	0.052272977646279854	2				NaN	NaN	0	NaN	3274	2803	6075
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6080	19.889	NaN	4579.5	30	0	604.84	0.106			+	30484	QAFAAVERY	9	70	527.7707974299799	1053.5270419267597	2	527.7708129882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QAFAAVERY_	REV__ENSG00000152234|ENST00000398752|ATP5F1A;REV__ENST00000586523.1_1_18:43665917-43666256:-|nuORF;REV__nc|ENSG00000152234|P25705-2|ATP5F1A;REV__nc|ENSG00000152234|P25705-3|ATP5F1A	40.77816245573522	0.41113185337114944	2				NaN	NaN	0	NaN	3275	2803	6075
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6081	19.89	NaN	38775	30	0	5384	0.035	+			40618	SVAKTILKR	9	88	508.33471719650043	1014.6548814598009	2	508.33447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVAKTILKR_	ENSG00000114978|ENST00000396049|MOB1A;ENSG00000173542|ENST00000309395|MOB1B;ENST00000497054.5_1_2:74386211-74405801:-|nuORF;nc|ENSG00000173542|Q7L9L4-2|MOB1B	201.61192446435922	2.6499037923345906E-05	2				NaN	NaN	0	NaN	3276	2803	6075
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6082	19.891	NaN	13453	30	0	1306.2	0.14			+	-1	GLGAGCCPALS	11	77	503.22907143078106	1004.4435899283621	2	503.22894287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_GLGAGC(Carbamidomethyl (C))CPALS_	REV__ENST00000339094.5_1_15:85113353-85113692:-|nuORF	42.396135135203025	0.5251566046092361	2				NaN	NaN	0	NaN	3277	2803	6075
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6100	19.93	NaN	43613	30	0	21247	0.214	+			32151	QSPQGRVM	8	75	451.72931123224595	901.4440695312919	2	451.7291259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QSPQGRVM_	ENSG00000169564|ENST00000303577|PCBP1	101.60071028292904	0.24979566554663588	2				NaN	NaN	0	NaN	3292	2806	6099
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6101	19.934	NaN	14752	30	0	2011.9	0.106				-1	DTTWWQSQTML	11	85	706.8111424589887	NaN	0	706.8112182617188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_DTTWWQSQTM(Oxidation (M))L_	ENSG00000135862|ENST00000258341|LAMC1;LAMC1|p.T1225Kfs*5|1|0.07|ENSG00000135862|chr1:183132506-183132507|-/AAAT|frameshift_variant	36.446750945000026	0.40298828388271424	2				NaN	NaN	0	NaN	3293	2806	6099
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6102	19.936	NaN	44671	30	0	10075	0.106	+			14664	GTIEKSKLITK	11	103	609.3771943685722	1216.7398358039443	2	609.3768920898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTIEKSKLITK_	ENSG00000144426|ENST00000683969|NBEAL1;NBEAL1|p.A1274Qfs*17|1|0.1|ENSG00000144426|chr2:203135766-203135766|A/-|frameshift_variant;NBEAL1|p.F1670Lfs*25|1|0.21|ENSG00000144426|chr2:203144843-203144843|T/-|frameshift_variant;NBEAL1|p.F2315Lfs*2|1|0.17|ENSG00000144426|chr2:203193900-203193900|T/-|frameshift_variant;NBEAL1|p.K2562Rfs*15|1|0.41|ENSG00000144426|chr2:203209306-203209306|A/-|frameshift_variant;NBEAL1|p.N2072Kfs*10|1|0.35|ENSG00000144426|chr2:203172825-203172826|-/A|frameshift_variant;NBEAL1|p.T1311Nfs*3|1|0.08|ENSG00000144426|chr2:203135875-203135876|-/A|frameshift_variant;nc|ENSG00000144426|Q6ZS30-1|NBEAL1;nc|ENSG00000144426|Q6ZS30|NBEAL1	196.66588293485884	3.516286770501266E-08	2				NaN	NaN	0	NaN	3294	2806	6099
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6103	19.938	NaN	8954.2	30	0	3019.5	0.106	+			2544	AQAPTKQPPQ	10	59	355.86083928355424	1064.5606884508627	3	355.86102294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AQAPTKQPPQ_	CHRM1|p.R320Q|1|0.36|ENSG00000168539|chr11:62910142-62910142|C/T|missense_variant	50.033510581677724	0.4566913063131936	2				NaN	NaN	0	NaN	3295	2806	6099
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6104	19.94	NaN	7426.8	30	0	977.29	0.106	+			40510	STYPAQNGQVK	11	65	596.8014222111102	1191.5882914890203	2	596.8016357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STYPAQNGQVK_	ENSG00000081237|ENST00000442510|PTPRC;nc|ENSG00000081237|P08575-10|PTPRC;nc|ENSG00000081237|P08575-4|PTPRC;nc|ENSG00000081237|P08575-5|PTPRC;nc|ENSG00000081237|P08575-6|PTPRC;nc|ENSG00000081237|P08575-7|PTPRC;nc|ENSG00000081237|P08575-8|PTPRC;nc|ENSG00000081237|P08575-9|PTPRC;PTPRC|p.N1239Tfs*17|1|0.43|ENSG00000081237|chr1:198755972-198755972|A/-|frameshift_variant	53.08895987439943	0.38514566451266113	2				NaN	NaN	0	NaN	3296	2806	6099
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6105	19.942	NaN	6542.2	30	0	918.62	0.036			+	27804	MSGFLICVE	9	72	528.2490972518782	1054.4836415705563	2	528.2490844726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_MSGFLIC(Carbamidomethyl (C))VE_	REV__ENST00000374724.1_2_9:108061538-108097897:+|nuORF	53.351449002276354	0.2690372970092375	2				NaN	NaN	0	NaN	3297	2806	6099
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6106	19.942	NaN	7706.6	30	0	1077.3	0.141			+	3669	ASYPPTDPLQ	10	77	544.7647166379221	1087.5148803426441	2	544.7647705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASYPPTDPLQ_	REV__ENSG00000166268|ENST00000552032|MYRFL	30.317721548370564	0.6322445173429027	2				NaN	NaN	0	NaN	3298	2806	6099
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6124	19.982	NaN	15599	30	0	4706.2	0.215			+	43047	TELEKRAAV	9	85	339.5291545586375	1015.5656342761126	3	339.5292663574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TELEKRAAV_	REV__ENST00000271469.7_2_1:162531513-162535849:+|nuORF	65.46538089061403	0.16805504838372562	2				NaN	NaN	0	NaN	3313	2809	6123
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6125	19.985	NaN	14011	30	0	2671.1	0.106	+			30535	QAKAPLPLGRS	11	74	569.3407099023884	1136.6668668715768	2	569.3408813476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QAKAPLPLGRS_	ENST00000259351.9_1_9:129677065-129724587:+|nuORF	47.227680397652996	0.4590463137409202	2				NaN	NaN	0	NaN	3314	2809	6123
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6126	19.987	NaN	14372	30	0	1957.7	0.106	+			43860	TMAPPIKSK	9	82	486.7788009850322	971.5430490368644	2	486.7808532714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TMAPPIKSK_	ENSG00000132669|ENST00000255006|RIN2;nc|ENSG00000132669|Q8WYP3-2|RIN2;RIN2|p.D879Gfs*3|1|0.16|ENSG00000132669|chr20:20000731-20000732|-/G|frameshift_variant;RIN2|p.I627Hfs*7|1|0.47|ENSG00000132669|chr20:19975749-19975750|-/C|frameshift_variant;RIN2|p.I627Sfs*4|2|0.25|ENSG00000132669|chr20:19975750-19975750|C/-|frameshift_variant	80.45461616416974	0.09558281504443908	2				NaN	NaN	0	NaN	3315	2809	6123
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6127	19.989	NaN	8197.4	30	0	1514.9	0.106	+			40985	SVGLPSRTK	9	58	472.77970969910257	943.5448664650052	2	472.7795104980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVGLPSRTK_	ENSG00000065526|ENST00000375759|SPEN	90.60085204095205	0.06317133949006545	2				NaN	NaN	0	NaN	3316	2809	6123
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6128	19.991	NaN	14914	30	0	9261.8	0.106	+			38889	SSPASKTTL	9	56	446.2426848987037	890.4708168642074	2	446.2424011230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSPASKTTL_	ENSG00000162437|ENST00000294428|RAVER2;ENST00000418058.1_1_1:65270770-65280577:+|nuORF;nc|ENSG00000162437|Q9HCJ3-2|RAVER2	59.93077597824379	0.21419174904018318	2				NaN	NaN	0	NaN	3317	2809	6123
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6129	19.993	NaN	4072.9	30	0	736.44	0.034				-1	GMCVILLK	8	62	467.266805675298	932.519058417396	2	467.2664489746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_GMC(Carbamidomethyl (C))VILLK_	nc|ENSG00000134242|Q9Y2R2-6|PTPN22	28.2542754592877	0.7411748056684583	2				NaN	NaN	0	NaN	3318	2809	6123
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6130	19.993	NaN	4732.3	30	0	637	0.143	+			581	ADKRITPLK	9	73	347.88503029300716	1040.6332614792216	3	347.88531494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ADKRITPLK_	ENSG00000163349|ENST00000426820|HIPK1;nc|ENSG00000163349|Q86Z02-2|HIPK1;nc|ENSG00000163349|Q86Z02-3|HIPK1;nc|ENSG00000163349|Q86Z02-4|HIPK1	58.78195531508484	0.22376836668196862	2				NaN	NaN	0	NaN	3319	2809	6123
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6145	20.027	NaN	61670	30	0	7623.5	0.214	+			39141	SSVGSVITKK	10	104	503.30037609274257	1004.5861992522852	2	503.3002014160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSVGSVITKK_	ENSG00000076554|ENST00000518937|TPD52;ENST00000517445.5_1_8:80962678-80964851:-|nuORF;ENST00000521354.5_1_8:80950353-81083761:-|nuORF;ENST00000522364.5_1_8:80963727-80992703:-|nuORF;nc|ENSG00000076554|P55327-2|TPD52;nc|ENSG00000076554|P55327-3|TPD52;nc|ENSG00000076554|P55327-5|TPD52;nc|ENSG00000076554|P55327-6|TPD52;nc|ENSG00000076554|P55327-7|TPD52;nc|ENSG00000076554|P55327|TPD52	133.9934435666947	0.012355562819581703	2				NaN	NaN	0	NaN	3331	2812	6144
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6146	20.03	NaN	13185	30	0	1654.5	0.106	+			6954	CPLLDQTLNS	10	76	552.2750753943341	1102.535597855468	2	552.27587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_CPLLDQTLNS_	chr19:41761527-41770802|220|23.97|0.5|5.59|+|1|CEACAM6,CEACAM6|2	62.107414245175825	0.3466735403679669	2				NaN	NaN	0	NaN	3332	2812	6144
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6147	20.032	NaN	14306	30	0	2035.2	0.106	+			5366	ATYAGVGANK	10	65	476.2471809090347	950.4798088848694	2	476.24798583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATYAGVGANK_	ENSG00000178038|ENST00000318962|ALS2CL;ENST00000383742.7_2_3:46712476-46718839:-|nuORF;ENST00000434140.5_2_3:46717393-46723043:-|nuORF;ENST00000486301.5_1_3:46717393-46718248:-|nuORF;nc|ENSG00000178038|Q60I27-2|ALS2CL;nc|ENSG00000178038|Q60I27-3|ALS2CL;nc|ENSG00000178038|Q60I27-6|ALS2CL	106.68306549817024	0.05784995512091477	2				NaN	NaN	0	NaN	3333	2812	6144
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6148	20.034	NaN	10247	30	0	1174.4	0.106	+			37018	SIQNQMQSK	9	79	532.2638611519345	NaN	0	532.2638549804688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SIQNQMQSK_	ENSG00000158985|ENST00000505065|CDC42SE2	102.0615471778698	0.01728177075344923	2				NaN	NaN	0	NaN	3334	2812	6144
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6149	20.036	NaN	15646	30	0	8832.6	0.106	+			329	AAPTAQKSL	9	59	443.75333404132977	885.4921151494596	2	443.7529602050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AAPTAQKSL_	ENSG00000158615|ENST00000367188|PPP1R15B	76.16968421966216	0.11411088698345859	2				NaN	NaN	0	NaN	3335	2812	6144
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6150	20.038	NaN	4374.5	30	0	887.23	0.036			+	7935	DSIKLQPAR	9	56	343.20109343994625	1026.5814509200388	3	343.2012634277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DSIKLQPAR_	REV__ENSG00000129691|ENST00000343823|ASH2L;REV__nc|ENSG00000129691|Q9UBL3-2|ASH2L;REV__nc|ENSG00000129691|Q9UBL3-3|ASH2L	21.9598887501803	0.5980208138527809	2				NaN	NaN	0	NaN	3336	2812	6144
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6151	20.038	NaN	6716.5	30	0	1055	0.142				-1	EAKNTGCYVP	10	68	569.7649437871579	1137.5153346411157	2	569.7654418945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_EAKNTGC(Carbamidomethyl (C))YVP_	CHD9|p.M2707Tfs*40|1|0.1|ENSG00000177200|chr16:53324320-53324321|-/C|frameshift_variant	51.19269402634007	0.44601001148513897	2				NaN	NaN	0	NaN	3337	2812	6144
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6166	20.072	NaN	34154	30	0	4763.4	0.214	+			35463	SASSLHLTK	9	89	472.2638908263682	942.5132287195364	2	472.2636413574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SASSLHLTK_	ENSG00000181396|ENST00000313056|OGFOD3;nc|ENSG00000181396|Q6PK18-2|OGFOD3	134.7655990226056	0.012935733000282069	2				NaN	NaN	0	NaN	3349	2815	6165
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6167	20.075	NaN	13821	30	0	3264	0.106	+			20688	KGPGAGSAL	9	61	379.21362885047046	756.4127047677409	2	379.2137145996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KGPGAGSAL_	AP2A1|p.Q851Rfs*5|1|0.43|ENSG00000196961|chr19:49805672-49805672|C/-|frameshift_variant;ENSG00000196961|ENST00000354293|AP2A1;ENST00000597774.5_1_19:50303271-50309027:+|nuORF;ENST00000600466.1_1_19:50304984-50305399:+|nuORF;nc|ENSG00000196961|O95782|AP2A1	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	3350	2815	6165
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6168	20.077	NaN	12125	30	0	1416.9	0.106	+			47649	VSCPVGIKK	9	73	494.2863491774484	986.5581454216968	2	494.2862548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_VSC(Carbamidomethyl (C))PVGIKK_	ENSG00000175806|ENST00000317173|MSRA;nc|ENSG00000175806|Q9UJ68-2|MSRA;nc|ENSG00000175806|Q9UJ68-3|MSRA;nc|ENSG00000175806|Q9UJ68-4|MSRA;nc|ENSG00000175806|Q9UJ68-5|MSRA	122.1759843771914	0.019882474861609503	2				NaN	NaN	0	NaN	3351	2815	6165
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6169	20.079	NaN	8719.6	30	0	1005.4	0.106				-1	 	0	71	321.70010386176216	641.3856547903243	2	321.7001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3352	2815	6165
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6170	20.081	NaN	10943	30	0	2159.9	0.106	+			1867	AILEKSRLK	9	75	529.3403286900817	1056.6661044469633	2	529.34033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AILEKSRLK_	ENSG00000101161|ENST00000266079|PRPF6;nc|ENSG00000101161|O94906-2|PRPF6;PRPF6|p.R763W|1|0.09|ENSG00000101161|chr20:64027684-64027684|C/T|missense_variant	109.43880257439609	0.029570636687953285	2				NaN	NaN	0	NaN	3353	2815	6165
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6171	20.083	NaN	10108	30	0	1067.1	0.034	+			37030	SIQTAIAKK	9	78	480.2976147291783	958.5806765251566	2	480.2971496582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SIQTAIAKK_	ENSG00000205413|ENST00000379958|SAMD9	115.49404669440601	0.023927554121326553	2				NaN	NaN	0	NaN	3354	2815	6165
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6172	20.083	NaN	8606.4	30	0	1509.5	0.141	+			1400	AEVSAVRLKK	10	73	550.8416599592614	1099.6687669853227	2	550.8428344726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AEVSAVRLKK_	ENSG00000274443|ENST00000624510|C8orf89	60.11826168202944	0.36476464221954025	2				NaN	NaN	0	NaN	3355	2815	6165
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6188	20.119	NaN	82400	30	0	13149	0.2	+			3112	ASGSFKLNK	9	113	476.26646005261784	950.5183671720357	2	476.26629638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASGSFKLNK_	ENSG00000124575|ENST00000244534|H1-3;ENSG00000124610|ENST00000244573|H1-1;ENSG00000168298|ENST00000304218|H1-4;ENSG00000184357|ENST00000331442|H1-5;ENSG00000187837|ENST00000343677|H1-2	172.24860141594272	0.002383092361811508	2				NaN	NaN	0	NaN	3368	2818	6187
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6189	20.122	NaN	33896	30	0	10075	0.106	+			35391	SAQGNVYVK	9	75	483.25597622869435	964.4973995241887	2	483.25592041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAQGNVYVK_	ENSG00000131051|ENST00000253363|RBM39;ENST00000397254.2_1_X:43889279-43890164:+|nuORF;ENST00000429968.5_1_20:34292405-34322136:-|nuORF;ENST00000492779.5_1_20:34292405-34320086:-|nuORF;ENST00000496183.5_1_20:34292405-34295154:-|nuORF;nc|ENSG00000131051|Q14498-2|RBM39;nc|ENSG00000131051|Q14498-3|RBM39;NDUFS1-RBM39|1|fusion;NDUFS1-RBM39|2|fusion;NDUFS1-RBM39|3|fusion;NDUFS1-RBM39|4|fusion	129.42129120953632	0.01549634589885217	2				NaN	NaN	0	NaN	3369	2818	6187
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6190	20.124	NaN	12381	30	0	2419.8	0.106			+	24925	LKSLRHTIQ	9	70	548.3354061579785	1094.6562593827568	2	548.3357543945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LKSLRHTIQ_	REV__ENSG00000163424|ENST00000295622|TEX55	72.87924865735499	0.12833875048249987	2				NaN	NaN	0	NaN	3370	2818	6187
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6191	20.126	NaN	15289	30	0	3045.2	0.106	+			4412	ATIDSQHGIEK	11	91	599.8070704214405	1197.5995879096808	2	599.806884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATIDSQHGIEK_	ENSG00000110002|ENST00000456829|VWA5A;nc|ENSG00000110002|O00534-2|VWA5A;nc|ENSG00000110002|O00534-3|VWA5A;nc|ENSG00000110002|O00534-4|VWA5A;VWA5A|p.D273Ifs*24|1|0.19|ENSG00000110002|chr11:124123014-124123014|A/-|frameshift_variant;VWA5A|p.D571Mfs*3|1|0.56|ENSG00000110002|chr11:124137094-124137094|A/-|frameshift_variant;VWA5A|p.G366Afs*38|1|0.21|ENSG00000110002|chr11:124123733-124123733|G/-|frameshift_variant	120.03343029724402	0.02011667187481704	2				NaN	NaN	0	NaN	3371	2818	6187
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6192	20.128	NaN	33789	30	0	4706.7	0.106	+			13263	GISETRIEK	9	94	516.7878289517246	1031.561104970249	2	516.787841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GISETRIEK_	ENSG00000079819|ENST00000337057|EPB41L2;ENSG00000082397|ENST00000341928|EPB41L3;ENSG00000159023|ENST00000343067|EPB41;ENST00000368126.2_1_6:131179278-131186801:-|nuORF;ENST00000452150.6_1_6:131179278-131188835:-|nuORF;nc|ENSG00000079819|O43491-2|EPB41L2;nc|ENSG00000079819|O43491-3|EPB41L2;nc|ENSG00000079819|O43491-4|EPB41L2;nc|ENSG00000082397|Q9Y2J2-2|EPB41L3;nc|ENSG00000082397|Q9Y2J2-4|EPB41L3;nc|ENSG00000159023|P11171-2|EPB41;nc|ENSG00000159023|P11171-3|EPB41;nc|ENSG00000159023|P11171-4|EPB41;nc|ENSG00000159023|P11171-5|EPB41;nc|ENSG00000159023|P11171-6|EPB41	123.20810148215591	0.019257656778428764	2				NaN	NaN	0	NaN	3372	2818	6187
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6193	20.129	NaN	16198	30	0	1355.8	0.038	+			33331	RGTKAWMETE	10	86	604.7882800924629	1207.5620072517256	2	604.7897338867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RGTKAWMETE_	nc|ENSG00000165828|Q96NZ9-4|PRAP1	53.08895987439943	0.42869529153390606	2				NaN	NaN	0	NaN	3373	2818	6187
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6194	20.13	NaN	9306.4	30	0	1182.7	0.141	+			38658	SSINSRFAK	9	82	505.2749194896076	1008.5352860460152	2	505.2751159667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSINSRFAK_	ENSG00000171311|ENST00000370902|EXOSC1;ENST00000471049.5_1_10:99197505-99205308:-|nuORF;ENST00000472345.5_1_10:99197505-99205641:-|nuORF;ENST00000476234.5_1_10:99200926-99205742:-|nuORF	117.81106730687013	0.02252488733980868	2				NaN	NaN	0	NaN	3374	2818	6187
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6206	20.157	NaN	14278	30	0	2634.1	0.214	+			41790	SVSQKLMAK	9	82	496.2837968586657	990.5530407841314	2	496.28363037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSQKLMAK_	ENSG00000137200|ENST00000373451|CMTR1	143.37361013837676	0.008897369944672323	2				NaN	NaN	0	NaN	3383	2821	6205
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6207	20.161	NaN	18524	30	0	2601.2	0.106	+			36170	SELETAQKL	9	92	340.18510903843696	1017.533497715511	3	340.18524169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SELETAQKL_	ENSG00000165695|ENST00000298545|AK8;ENST00000476719.1_1_9:135601077-135753754:-|nuORF;nc|ENSG00000165695|Q96MA6-2|AK8	58.78195531508484	0.22376836668196862	2				NaN	NaN	0	NaN	3384	2821	6205
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6208	20.163	NaN	10676	30	0	968.77	0.106			+	10528	EWERIENKAQ	10	85	651.8252472428538	1301.6359415525076	2	651.8255004882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EWERIENKAQ_	REV__ENSG00000205302|ENST00000379516|SNX2;REV__ENST00000514030.1_1_5:122153007-122163181:+|nuORF;REV__nc|ENSG00000205302|O60749-2|SNX2	54.722347961057174	0.4138398245444204	2				NaN	NaN	0	NaN	3385	2821	6205
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6209	20.165	NaN	6940.2	30	0	754.35	0.106	+			15421	GTYQDRLTK	9	71	541.2857780817696	1080.5570032303392	2	541.2855224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTYQDRLTK_	ENSG00000164758|ENST00000297347|MED30;ENST00000519879.1_1_8:118533115-118541135:+|nuORF;nc|ENSG00000164758|Q96HR3-2|MED30	62.166158670854095	0.19555750436066183	2				NaN	NaN	0	NaN	3386	2821	6205
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6210	20.167	NaN	9320	30	0	1630.2	0.106	+			870	AEHEVKKVTL	10	72	385.2239445353828	1152.6500042063485	3	385.2239685058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEHEVKKVTL_	ENSG00000100813|ENST00000605057|ACIN1;nc|ENSG00000100813|Q9UKV3-2|ACIN1;nc|ENSG00000100813|Q9UKV3-3|ACIN1;nc|ENSG00000100813|Q9UKV3-5|ACIN1;nc|ENSG00000100813|Q9UKV3|ACIN1	78.26377905018397	0.20980573808910843	2				NaN	NaN	0	NaN	3387	2821	6205
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6211	20.169	NaN	35063	30	0	4403.1	0.106	+			3036	ASFENVRAK	9	100	511.27487127695935	1020.5351896207187	2	511.2740478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASFENVRAK_	ENSG00000136238|ENST00000348035|RAC1;ENSG00000169750|ENST00000306897|RAC3;ENST00000488373.5_1_7:6415539-6442074:+|nuORF;nc|ENSG00000136238|P63000-2|RAC1	120.30596017624542	0.02101454110788768	2				NaN	NaN	0	NaN	3388	2821	6205
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6212	20.17	NaN	8235.1	30	0	776.88	0.035	+			36301	SERNSTEAL	9	69	503.74352823914893	1005.4725035450979	2	503.74322509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SERNSTEAL_	ENSG00000131263|ENST00000332687|RLIM;ENST00000558657.1_1_15:50086592-50087141:+|nuORF;nc|ENSG00000131263|Q9NVW2-2|RLIM	49.44154591367651	0.3095138337212152	2				NaN	NaN	0	NaN	3389	2821	6205
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6228	20.203	NaN	149930	30	0	20698	0.214	+			39055	SSSPVNVKK	9	115	494.27758988025806	986.5406268273161	2	494.2767333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SSSPVNVKK_	ENSG00000153187|ENST00000640218|HNRNPU;ENST00000476241.2_2_1:245025757-245027609:-|nuORF;nc|ENSG00000153187|Q00839-2|HNRNPU	145.15565482312357	0.00806134135205793	2				NaN	NaN	0	NaN	3402	2824	6227
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6229	20.207	NaN	54487	30	0	9927.5	0.106	+			44393	TSLKSIMKK	9	89	518.315091903772	1034.6156308743439	2	518.3151245117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TSLKSIMKK_	ENSG00000132854|ENST00000371153|KANK4;nc|ENSG00000132854|Q5T7N3-2|KANK4	94.4091291819064	0.0524345700464502	2				NaN	NaN	0	NaN	3403	2824	6227
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6230	20.209	NaN	56988	30	0	9938.2	0.106	+			5588	AVATKFVNK	9	100	489.29292478563275	976.5712966380655	2	489.29229736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVATKFVNK_	ENSG00000038382|ENST00000344204|TRIO;ENST00000508717.1_1_5:14498631-14508016:+|nuORF;nc|ENSG00000038382|O75962-2|TRIO;nc|ENSG00000038382|O75962-3|TRIO;nc|ENSG00000038382|O75962-4|TRIO	176.44474024533739	0.0016668318535579616	2				NaN	NaN	0	NaN	3404	2824	6227
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6231	20.211	NaN	98906	30	0	11710	0.106	+			2620	AQIENSAAVQK	11	106	579.8098501140284	1157.6051472948568	2	579.8094482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AQIENSAAVQK_	ENSG00000117226|ENST00000370481|GBP3;ENSG00000117228|ENST00000370473|GBP1;ENST00000394662.2_1_1:89887573-89889825:+|nuORF;GBP1|p.K391Sfs*28|1|0.19|ENSG00000117228|chr1:89056212-89056212|T/-|frameshift_variant;GBP3|p.G430Afs*34|1|0.37|ENSG00000117226|chr1:89010977-89010977|C/-|frameshift_variant;nc|ENSG00000117226|Q9H0R5-4|GBP3	233.08765363663912	3.587432295658514E-18	2				NaN	NaN	0	NaN	3405	2824	6227
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6232	20.212	NaN	32612	30	0	3263.9	0.106	+			34616	RVPVEKPVYK	10	99	405.58024219403694	1213.718897182311	3	405.5799865722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RVPVEKPVYK_	ENSG00000184428|ENST00000329245|TOP1MT;nc|ENSG00000184428|Q969P6-2|TOP1MT	99.78786539795823	0.07832680346773438	2				NaN	NaN	0	NaN	3406	2824	6227
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6233	20.214	NaN	17968	30	0	1837.3	0.036	+			40075	STNPFRPQK	9	75	537.7882811393733	1073.5620093455466	2	537.7887573242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STNPFRPQK_	ENSG00000174021|ENST00000370645|GNG5;nc|ENSG00000133136|A0A804HLA8|GNG5B	79.71258880314673	0.09879134589249085	2				NaN	NaN	0	NaN	3407	2824	6227
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6234	20.215	NaN	14971	30	0	1140.7	0.146	+			8933	EEWEDTKDSKE	11	79	698.2995944092038	1394.5846358852075	2	698.2979736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EEWEDTKDSKE_	ENSG00000162687|ENST00000294725|KCNT2;ENST00000451324.6_1_1:196197356-196228734:-|nuORF;ENST00000498426.5_1_1:196197356-196286329:-|nuORF;ENST00000610076.1_1_1:196227273-196577439:-|nuORF;nc|ENSG00000162687|Q6UVM3-2|KCNT2;nc|ENSG00000162687|Q6UVM3-3|KCNT2;nc|ENSG00000162687|Q6UVM3-4|KCNT2	67.49366992349736	0.25663419177724	2				NaN	NaN	0	NaN	3408	2824	6227
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6253	20.251	NaN	24839	30	0	2928.9	0.214	+			5248	ATVDIVQKK	9	91	501.30332907731434	1000.5921052214287	2	501.30328369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATVDIVQKK_	AP4B1|p.C320Afs*21|1|0.35|ENSG00000134262|chr1:113900060-113900060|A/-|frameshift_variant;ENSG00000134262|ENST00000369569|AP4B1;ENST00000489499.5_1_1:114442984-114447339:-|nuORF;nc|ENSG00000134262|Q9Y6B7-2|AP4B1	143.8867514904718	0.008656634767784652	2				NaN	NaN	0	NaN	3424	2827	6252
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6254	20.255	NaN	19014	30	0	3695.1	0.106			+	43423	TGKLGQLKY	9	88	336.5339368598552	1006.5799811797656	3	336.5343017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TGKLGQLKY_	REV__ENSG00000174776|ENST00000682715|WDR49;REV__WDR49|p.K607Nfs*9|2|0.38|ENSG00000174776|chr3:167505314-167505314|T/-|frameshift_variant	24.20275056022122	0.577060078256802	2				NaN	NaN	0	NaN	3425	2827	6252
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6255	20.257	NaN	29742	30	0	4450.1	0.106	+			5314	ATVLTSVKK	9	79	473.8003347655343	945.5861165978686	2	473.80029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATVLTSVKK_	ENSG00000092201|ENST00000216297|SUPT16H;ENST00000537175.1_1_12:16553955-16554369:-|nuORF;SUPT16H|p.Y764Cfs*2|1|0.36|ENSG00000092201|chr14:21359493-21359494|AT/-|frameshift_variant	154.1183686248401	0.005909203230691971	2				NaN	NaN	0	NaN	3426	2827	6252
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6256	20.259	NaN	18342	30	0	4030.5	0.106	+			48405	VTIKALKEK	9	84	343.893498310594	1028.658665531982	3	343.8937072753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTIKALKEK_	CUX1|p.A591Qfs*9|1|0.06|ENSG00000257923|chr7:102197181-102197182|-/CAGT|frameshift_variant;CUX1|p.E933Sfs*59|1|0.14|ENSG00000257923|chr7:102202089-102202089|C/-|frameshift_variant;CUX1|p.I1081Sfs*39|2|0.46|ENSG00000257923|chr7:102227471-102227471|C/-|frameshift_variant;ENSG00000257923|ENST00000292535|CUX1;ENST00000497815.5_1_7:101459310-101755188:+|nuORF;ENST00000558836.5_1_7:101575863-101926379:+|nuORF;ENST00000560541.5_1_7:101556607-101926379:+|nuORF;nc|ENSG00000257923|P39880-2|CUX1;nc|ENSG00000257923|P39880-3|CUX1;nc|ENSG00000257923|P39880-4|CUX1;nc|ENSG00000257923|P39880-5|CUX1;nc|ENSG00000257923|P39880-6|CUX1;nc|ENSG00000257923|P39880-9|CUX1;nc|ENSG00000257923|Q13948-10|CUX1;nc|ENSG00000257923|Q13948-2|CUX1;nc|ENSG00000257923|Q13948-9|CUX1;nc|ENSG00000257923|Q13948|CUX1	82.7504851949679	0.08565546331141553	2				NaN	NaN	0	NaN	3427	2827	6252
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6257	20.261	NaN	11216	30	0	2695.3	0.106				-1	MTHHLTKQ	8	56	506.2563146125912	1010.4980762919824	2	506.2563781738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_M(Oxidation (M))THHLTKQ_	ENST00000599501.6_3_2:98292334-98305447:+|nuORF	40.77816245573522	0.6514838689002179	2				NaN	NaN	0	NaN	3428	2827	6252
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6258	20.262	NaN	3911	30	0	675.1	0.036				-1	IEKQLCPAI	9	64	357.8683674487117	NaN	0	357.8683776855469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_IEKQLC(Carbamidomethyl (C))PAI_	ENSG00000151065|ENST00000280665|DCP1B;ENST00000543381.5_1_12:2055374-2100299:-|nuORF;nc|ENSG00000151065|Q8IZD4-2|DCP1B	40.77816245573522	0.2702456086868081	2				NaN	NaN	0	NaN	3429	2827	6252
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6259	20.263	NaN	8034.3	30	0	865.37	0.143			+	25197	LMHSLSQRCE	10	79	610.2818902926844	1218.5492276521686	2	610.2818603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_LM(Oxidation (M))HSLSQRCE_	REV__ENSG00000129083|ENST00000439561|COPB1	54.776311868738084	0.41334902933431344	2				NaN	NaN	0	NaN	3430	2827	6252
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6275	20.298	NaN	20389	30	0	2862.3	0.214	+			2959	ASEVLKHLK	9	88	512.8111491499673	1023.6077453667345	2	512.8110961914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASEVLKHLK_	ENSG00000089053|ENST00000261819|ANAPC5;ENST00000534976.5_1_12:121756302-121773353:-|nuORF;ENST00000535641.5_1_12:121746285-121765135:-|nuORF;ENST00000545218.5_1_12:121756099-121775126:-|nuORF;nc|ENSG00000089053|Q9UJX4-3|ANAPC5	107.00750918261382	0.032051501805654005	2				NaN	NaN	0	NaN	3443	2830	6274
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6276	20.302	NaN	12781	30	0	2613.3	0.106	+			43909	TNRKRPRP	8	84	342.20944351441824	1023.6065011434548	3	342.2095947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TNRKRPRP_	ENST00000301071.11_1_12:49582839-49582968:-|nuORF	31.954861631926434	0.7126016770032289	2				NaN	NaN	0	NaN	3444	2830	6274
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6277	20.304	NaN	7441.6	30	0	1194.3	0.106	+			1968	AIYGTRKFK	9	74	542.3195514657924	1082.6245499983847	2	542.3197021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AIYGTRKFK_	ENSG00000197629|ENST00000361050|MPEG1	101.45984612302182	0.0377122763612125	2				NaN	NaN	0	NaN	3445	2830	6274
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6278	20.306	NaN	17040	30	0	2527.2	0.106	+			12695	GEKKAYVRL	9	87	355.21331909143834	1062.618127874515	3	355.21337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEKKAYVRL_	ENSG00000198242|ENST00000422514|RPL23A;ENST00000471152.1_2_3:161146917-161147007:-|nuORF	47.95952297671804	0.32689736945648856	2				NaN	NaN	0	NaN	3446	2830	6274
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6279	20.308	NaN	7100	30	0	3950.5	0.106	+			35546	SAVRPVIEK	9	52	333.5376904400814	997.5912419204442	3	333.537841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SAVRPVIEK_	ENSG00000116750|ENST00000367454|UCHL5;nc|ENSG00000116750|Q9Y5K5-2|UCHL5;nc|ENSG00000116750|Q9Y5K5-4|UCHL5;nc|ENSG00000116750|Q9Y5K5|UCHL5	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	3447	2830	6274
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6280	20.309	NaN	10236	30	0	4858.1	0.033	+			38899	SSPGTARTL	9	60	445.24052482563553	888.4664967180711	2	445.24041748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSPGTARTL_	ENSG00000117983|ENST00000529681|MUC5B;MUC5B|p.E2929Gfs*98|1|0.13|ENSG00000117983|chr11:1245660-1245661|-/GC|frameshift_variant;MUC5B|p.P2717Qfs*3|2|0.21|ENSG00000117983|chr11:1245025-1245025|C/-|frameshift_variant;MUC5B|p.P3417Qfs*3|1|0.41|ENSG00000117983|chr11:1247125-1247125|C/-|frameshift_variant;MUC5B|p.S3126Pfs*13|1|0.37|ENSG00000117983|chr11:1246251-1246251|C/-|frameshift_variant;MUC5B|p.S3878Pfs*27|1|0.13|ENSG00000117983|chr11:1248507-1248507|C/-|frameshift_variant;MUC5B|p.S4017Lfs*56|1|0.22|ENSG00000117983|chr11:1248928-1248929|-/C|frameshift_variant;MUC5B|p.T4706Pfs*4|2|0.37|ENSG00000117983|chr11:1250996-1250996|A/-|frameshift_variant	38.753607047826485	0.4348790777924195	2				NaN	NaN	0	NaN	3448	2830	6274
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6281	20.31	NaN	4486.7	30	0	1698.3	0.143			+	-1	IRLATMIICS	10	48	393.21942510749096	1176.636445922673	3	393.2192687988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_IRLATMIIC(Carbamidomethyl (C))S_	REV__ENSG00000198678|ENST00000328207|OR5BS1P	15.333111300571575	0.7385351678742351	2				NaN	NaN	0	NaN	3449	2830	6274
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6299	20.349	NaN	16996	30	0	1813.3	0.214	+			48784	VTYNGVDNNK	10	77	562.2726992343324	1122.5308455354648	2	562.2730102539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTYNGVDNNK_	ENSG00000122545|ENST00000350320|SEPTIN7;ENST00000425198.1_1_7:35872473-35938044:+|nuORF;ENST00000469999.1_1_7:152065296-152065533:+|nuORF;ENST00000492940.1_1_7:35930257-35938044:+|nuORF;nc|ENSG00000122545|Q16181-2|SEPTIN7	159.33581866081465	0.006837894036646432	2				NaN	NaN	0	NaN	3464	2833	6298
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6300	20.353	NaN	29910	30	0	3100.6	0.106			+	33630	RLTVCMCVR	9	89	577.2852284150597	1152.5559038969193	2	577.2852783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_RLTVCM(Oxidation (M))C(Carbamidomethyl (C))VR_	REV__ENST00000344691.8_1_21:36260285-36260417:-|nuORF	79.71258880314673	0.09879134589249085	2				NaN	NaN	0	NaN	3465	2833	6298
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6301	20.355	NaN	9070.4	30	0	962.99	0.106	+			12696	GEKKAYVRL	9	70	532.317135527601	1062.6197181220018	2	532.3172607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEKKAYVRL_	ENSG00000198242|ENST00000422514|RPL23A;ENST00000471152.1_2_3:161146917-161147007:-|nuORF	55.08391021199286	0.2545954270840753	2				NaN	NaN	0	NaN	3466	2833	6298
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6302	20.357	NaN	6025	30	0	808.16	0.106	+			9349	EIRAGTAFY	9	62	514.265718853638	1026.5168847740758	2	514.2658081054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EIRAGTAFY_	ENSG00000102763|ENST00000379310|VWA8;nc|ENSG00000102763|A3KMH1-2|VWA8;nc|ENSG00000102763|A3KMH1-3|VWA8;VWA8|p.D1438Ifs*16|1|0.27|ENSG00000102763|chr13:41685063-41685063|T/-|frameshift_variant;VWA8|p.G1575Efs*53|1|0.25|ENSG00000102763|chr13:41611729-41611729|C/-|frameshift_variant;VWA8|p.L359*|1|0.4|ENSG00000102763|chr13:41883391-41883391|A/-|frameshift_variant;VWA8|p.N701Kfs*12|1|0.16|ENSG00000102763|chr13:41787504-41787505|-/T|frameshift_variant;VWA8|p.N866Kfs*18|1|0.45|ENSG00000102763|chr13:41729582-41729583|-/T|frameshift_variant;VWA8|p.T1319Kfs*27|1|0.09|ENSG00000102763|chr13:41690186-41690186|G/-|frameshift_variant	44.116797842482775	0.37197099687881774	2				NaN	NaN	0	NaN	3467	2833	6298
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6303	20.358	NaN	6005.8	30	0	1229.3	0.106	+			23441	LADKKAPG	8	57	400.2374016819658	798.4602504307317	2	400.2373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LADKKAPG_	ENSG00000122870|ENST00000373886|BICC1;nc|ENSG00000122870|Q9H694-2|BICC1	53.351449002276354	0.5676011784961348	2				NaN	NaN	0	NaN	3468	2833	6298
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6304	20.36	NaN	6057.1	30	0	1136.1	0.037			+	33734	RPMEHHRSK	9	66	589.3033113675775	1176.592069801955	2	589.3037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RPMEHHRSK_	REV__ENSG00000113141|ENST00000417647|IK;REV__ENST00000434096.1_1_2:58688403-58689123:-|nuORF;REV__IK|p.M189Rfs*54|1|0.04|ENSG00000113141|chr5:140654559-140654560|-/AA|frameshift_variant	37.15910966729921	0.4535818937225704	2				NaN	NaN	0	NaN	3469	2833	6298
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6305	20.361	NaN	7981.9	30	0	1413.9	0.141	+			40339	STTGCVLNK	9	76	490.2480109160013	978.4814688988026	2	490.24737548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_STTGC(Carbamidomethyl (C))VLNK_	CEPT1|p.C185Lfs*28|1|0.43|ENSG00000134255|chr1:111161213-111161214|-/T|frameshift_variant;CEPT1|p.C185Vfs*26|1|0.36|ENSG00000134255|chr1:111161214-111161214|T/-|frameshift_variant;ENSG00000134255|ENST00000357172|CEPT1;ENST00000480324.5_1_1:111690336-111702181:+|nuORF	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	3470	2833	6298
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6321	20.395	NaN	21241	30	0	3567.1	0.214			+	21685	KQEISSLVR	9	83	530.3119420686475	1058.6093312040948	2	530.3119506835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KQEISSLVR_	REV__ENSG00000175793|ENST00000339276|SFN;REV__nc|ENSG00000175793|P31947-2|SFN	122.1759843771914	0.019882474861609503	2				NaN	NaN	0	NaN	3483	2836	6320
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6322	20.399	NaN	6888.3	30	0	1169.8	0.106	+			49027	VVGTNIVKK	9	61	479.30822894934795	956.6019049654959	2	479.3081970214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVGTNIVKK_	ENSG00000142207|ENST00000382751|URB1	85.16082228582465	0.07850854922700509	2				NaN	NaN	0	NaN	3484	2836	6320
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6323	20.401	NaN	13551	30	0	5959.6	0.106			+	-1	RCCLWHGSLYA	11	72	711.8238397433536	1421.633126553507	2	711.8217163085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_RC(Carbamidomethyl (C))C(Carbamidomethyl (C))LWHGSLYA_	REV__ENSG00000185989|ENST00000334062|RASA3;REV__nc|ENSG00000185989|Q14644-2|RASA3	29.170058357718403	0.683821074385409	2				NaN	NaN	0	NaN	3485	2836	6320
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6324	20.403	NaN	4327.2	30	0	921.28	0.106			+	2348	AMTSRTKE	8	55	462.23461640098617	922.4546798687724	2	462.2342529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AMTSRTKE_	REV__ENST00000576058.2_1_16:13552215-13552527:+|nuORF	82.24051045832904	0.30490469762271794	2				NaN	NaN	0	NaN	3486	2836	6320
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6325	20.405	NaN	4721.8	30	0	661.24	0.106				-1	VMGNPKVK	8	65	444.75207617636295	887.4895994195259	2	444.7520751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_VM(Oxidation (M))GNPKVK_	ENSG00000223609|ENST00000650601|HBD;ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF;HBD|p.A63V|1|0.34|ENSG00000223609|chr11:5234118-5234118|G/A|missense_variant	30.503639358989545	0.7238069182250283	2				NaN	NaN	0	NaN	3487	2836	6320
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6326	20.407	NaN	8256.7	30	0	2860.7	0.036			+	22877	KVLGDEPDEP	10	73	549.768050956888	NaN	0	549.76806640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KVLGDEPDEP_	REV__ENSG00000084710|ENST00000403714|EFR3B;REV__nc|ENSG00000084710|Q9Y2G0-3|EFR3B	37.81151784470057	0.3760215235790741	2				NaN	NaN	0	NaN	3488	2836	6320
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6327	20.407	NaN	6957	30	0	1451.2	0.139	+			13799	GQLSVHTPK	9	67	483.7718888299765	965.529224726753	2	483.7716064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GQLSVHTPK_	ENSG00000114861|ENST00000649528|FOXP1;nc|ENSG00000285708|Q9H334-3|FOXP1;nc|ENSG00000285708|Q9H334-4|FOXP1;nc|ENSG00000285708|Q9H334-6|FOXP1;nc|ENSG00000285708|Q9H334-7|FOXP1;nc|ENSG00000285708|Q9H334-8|FOXP1	55.08391021199286	0.2545954270840753	2				NaN	NaN	0	NaN	3489	2836	6320
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6342	20.441	NaN	56981	30	0	12107	0.214	+			23522	LAHSGSDL	8	88	400.20090866871016	798.3872644042203	2	400.2007141113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LAHSGSDL_	ENSG00000198420|ENST00000479870|TCAF1;ENST00000392900.3_1_7:143551228-143582358:-|nuORF;ENST00000414990.2_3_7:143295168-143301929:+|nuORF;nc|ENSG00000198420|Q9Y4C2-2|TCAF1	170.31369407433692	0.11544495327688666	2				NaN	NaN	0	NaN	3501	2839	6341
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6343	20.444	NaN	30108	30	0	8087.4	0.106				-1	 	0	90	346.86094995174994	1037.5610204554498	3	346.86114501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3502	2839	6341
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6344	20.446	NaN	37842	30	0	5698.5	0.106	+			6019	AVMDVVKKQK	10	94	573.3394806189278	1144.6644083046556	2	573.3396606445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVMDVVKKQK_	ENSG00000092201|ENST00000216297|SUPT16H;SUPT16H|p.K393Sfs*29|2|0.2|ENSG00000092201|chr14:21364882-21364882|T/-|frameshift_variant;SUPT16H|p.S365Mfs*24|1|0.04|ENSG00000092201|chr14:21365096-21365097|-/A|frameshift_variant;SUPT16H|p.Y764Cfs*2|1|0.36|ENSG00000092201|chr14:21359493-21359494|AT/-|frameshift_variant	155.5846463517096	0.00750394161302585	2				NaN	NaN	0	NaN	3503	2839	6341
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6345	20.448	NaN	9521.2	30	0	1206.4	0.106	+			4774	ATNGAKFLK	9	77	475.27690630445613	948.5392596757123	2	475.2767028808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATNGAKFLK_	ENSG00000006282|ENST00000006658|SPATA20;ENST00000503063.5_1_17:48628810-48629053:+|nuORF;ENST00000504271.1_1_17:48628191-48629053:+|nuORF;ENST00000504334.5_1_17:48627490-48633020:+|nuORF;ENST00000511937.5_1_17:48628543-48633020:+|nuORF;nc|ENSG00000006282|Q8TB22-3|SPATA20;nc|ENSG00000006282|Q8TB22|SPATA20;SPATA20|p.S677Pfs*29|1|0.12|ENSG00000006282|chr17:50554367-50554367|T/-|frameshift_variant	113.41158876095287	0.025516849225023126	2				NaN	NaN	0	NaN	3504	2839	6341
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6346	20.45	NaN	24218	30	0	3745.7	0.106	+			2598	AQGNVYHLK	9	83	515.2777105931157	1028.5408682530312	2	515.2777709960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AQGNVYHLK_	ENSG00000143013|ENST00000370544|LMO4	150.36159442982594	0.006784847064083231	2				NaN	NaN	0	NaN	3505	2839	6341
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6347	20.452	NaN	8478.7	30	0	1540.3	0.036	+			46410	VENSGQRESL	10	75	559.7752548882179	1117.5359568432357	2	559.7753295898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VENSGQRESL_	DNTTIP2|p.N616Tfs*33|1|0.13|ENSG00000067334|chr1:93873174-93873174|T/-|frameshift_variant;DNTTIP2|p.N659Mfs*6|1|0.42|ENSG00000067334|chr1:93872163-93872163|T/-|frameshift_variant;DNTTIP2|p.R633Tfs*24|1|0.25|ENSG00000067334|chr1:93873124-93873125|-/T|frameshift_variant;ENSG00000067334|ENST00000436063|DNTTIP2	75.65223720490533	0.23114180991572172	2				NaN	NaN	0	NaN	3506	2839	6341
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6348	20.452	NaN	14224	30	0	1970.2	0.141	+			25127	LLQPPFFHP	9	76	548.3012010006929	1094.5878490681857	2	548.3013916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LLQPPFFHP_	ENSG00000197993|ENST00000355265|KEL	68.78682469695295	0.14603441672067394	2				NaN	NaN	0	NaN	3507	2839	6341
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6364	20.487	NaN	53262	30	0	20784	0.214				-1	IIMGIPMNIG	10	76	358.8610332361928	1073.5612703087784	3	358.8612060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_IIM(Oxidation (M))GIPMNIG_	ENSG00000148606|ENST00000372371|POLR3A	29.170058357718403	0.6416167986984785	2				NaN	NaN	0	NaN	3520	2842	6363
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6365	20.49	NaN	95189	30	0	11868	0.106	+			27736	MQNMSIHTK	9	111	545.2628191946436	1088.5110854560871	2	545.2634887695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MQNMSIHTK_	CON__H-INV:HIT000292931;CON__P05787;CON__REFSEQ:XP_092267;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	145.46060221211434	0.007927189773590037	2				NaN	NaN	0	NaN	3521	2842	6363
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6366	20.492	NaN	23976	30	0	3104.2	0.106	+			41717	SVSEVMKESK	10	90	562.2871264458587	1122.5596999585173	2	562.2871704101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVSEVMKESK_	ENSG00000132305|ENST00000410111|IMMT;ENST00000474969.5_1_2:86385703-86422514:-|nuORF;ENST00000486633.1_1_2:86400704-86422514:-|nuORF;nc|ENSG00000132305|Q16891-2|IMMT;nc|ENSG00000132305|Q16891-3|IMMT;nc|ENSG00000132305|Q16891-4|IMMT	232.8335340409222	8.242528170248475E-16	2				NaN	NaN	0	NaN	3522	2842	6363
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6367	20.494	NaN	23747	30	0	7144.8	0.106	+			2599	AQGNVYHLK	9	95	343.8538814372594	1028.5398149119783	3	343.8540344238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AQGNVYHLK_	ENSG00000143013|ENST00000370544|LMO4	58.22992032128504	0.22837015374068087	2				NaN	NaN	0	NaN	3523	2842	6363
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6368	20.496	NaN	19788	30	0	9960.2	0.106	+			41718	SVSEVMKESK	10	77	375.19335434731425	1122.5582336421428	3	375.1936340332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVSEVMKESK_	ENSG00000132305|ENST00000410111|IMMT;ENST00000474969.5_1_2:86385703-86422514:-|nuORF;ENST00000486633.1_1_2:86400704-86422514:-|nuORF;nc|ENSG00000132305|Q16891-2|IMMT;nc|ENSG00000132305|Q16891-3|IMMT;nc|ENSG00000132305|Q16891-4|IMMT	41.42661286455405	0.5359995577334734	2				NaN	NaN	0	NaN	3524	2842	6363
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6369	20.498	NaN	13477	30	0	1334	0.035	+			648	AEAEKKVQL	9	85	508.29255629933186	1014.5705596654637	2	508.29217529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEAEKKVQL_	ENSG00000144747|ENST00000398559|TMF1;nc|ENSG00000144747|P82094-2|TMF1;TMF1|p.R506I|1|0.23|ENSG00000144747|chr3:69043811-69043811|C/A|missense_variant	82.7504851949679	0.08565546331141553	2				NaN	NaN	0	NaN	3525	2842	6363
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6370	20.498	NaN	16072	30	0	3503.5	0.141	+			12843	GENVWRCCQ	9	82	547.7286136139853	1093.4426742947705	2	547.7291259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GENVWRCCQ_	ENSG00000141750|ENST00000333461|STAC2;nc|ENSG00000141750|Q6ZMT1-2|STAC2	54.776311868738084	0.25715957988447635	2				NaN	NaN	0	NaN	3526	2842	6363
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6384	20.529	NaN	33709	30	0	5397.8	0.185	+			27737	MQNMSIHTK	9	89	545.2628191946436	1088.5110854560871	2	545.2634887695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MQNMSIHTK_	CON__H-INV:HIT000292931;CON__P05787;CON__REFSEQ:XP_092267;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	140.11223852658463	0.010427410095706195	2				NaN	NaN	0	NaN	3537	2845	6383
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6385	20.532	NaN	12135	30	0	2206.4	0.106	+			39792	STLAVTSQK	9	64	467.76397526028427	933.5133975873686	2	467.7635803222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STLAVTSQK_	ENSG00000132549|ENST00000357162|VPS13B;nc|ENSG00000132549|Q7Z7G8-3|VPS13B;nc|ENSG00000132549|Q7Z7G8-6|VPS13B;nc|ENSG00000132549|Q7Z7G8|VPS13B;VPS13B|p.I1913*|1|0.3|ENSG00000132549|chr8:99642246-99642246|A/-|frameshift_variant;VPS13B|p.M3156Ifs*2|1|0.07|ENSG00000132549|chr8:99832427-99832428|-/TA|frameshift_variant;VPS13B|p.S3988Lfs*4|1|0.55|ENSG00000132549|chr8:99875552-99875553|-/C|frameshift_variant;VPS13B|p.S3988Pfs*25|1|0.11|ENSG00000132549|chr8:99875553-99875553|C/-|frameshift_variant	120.8684288430529	0.02067403653475984	2				NaN	NaN	0	NaN	3538	2845	6383
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6386	20.534	NaN	8644.4	30	0	2810.3	0.106	+			49020	VVGPVGCGK	9	63	436.73636392496064	871.4581749167213	2	436.7365417480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_VVGPVGC(Carbamidomethyl (C))GK_	ABCC3|p.A658D|1|0.1|ENSG00000108846|chr17:50669175-50669175|C/A|missense_variant;ABCC3|p.L968Afs*31|1|0.33|ENSG00000108846|chr17:50675920-50675921|-/G|frameshift_variant;ENSG00000108846|ENST00000285238|ABCC3;ENST00000502426.5_1_17:48736553-48755440:+|nuORF;nc|ENSG00000108846|O15438-2|ABCC3;nc|ENSG00000108846|O15438-4|ABCC3	73.97473282117947	0.12360187025703594	2				NaN	NaN	0	NaN	3539	2845	6383
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6387	20.536	NaN	7196.2	30	0	987.87	0.106			+	2055	ALAGAGEPAAK	11	67	478.2634757507053	954.5123985682106	2	478.2637023925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ALAGAGEPAAK_	REV__ENSG00000060069|ENST00000613122|CTDP1;REV__nc|ENSG00000060069|Q9Y5B0-4|CTDP1	71.87747018426188	0.2200878389444539	2				NaN	NaN	0	NaN	3540	2845	6383
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6388	20.538	NaN	8716.2	30	0	1502.5	0.106			+	-1	DTCDRKSLL	9	51	383.85700719715237	1148.549192191657	3	383.8571472167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))DTC(Carbamidomethyl (C))DRKSLL_	REV__XIRP2|p.E1445Dfs*2|1|0.27|ENSG00000163092|chr2:167246249-167246262|TGAAAGAGAGATTT/-|frameshift_variant	25.57405402267927	0.5642445186134241	2				NaN	NaN	0	NaN	3541	2845	6383
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6389	20.54	NaN	7022.3	30	0	1527.6	0.106	+			9999	ERLSPLASSSR	11	73	601.8284957884233	1201.6424386436465	2	601.8287963867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ERLSPLASSSR_	ENST00000380733.8_1_9:15506621-15511001:-|nuORF;ENST00000380738.8_1_9:15506621-15510932:-|nuORF	31.634271133179894	0.6579734920221648	2				NaN	NaN	0	NaN	3542	2845	6383
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6390	20.541	NaN	4523.6	30	0	1006.3	0.033	+			18756	ITLTPVRP	8	54	448.7819169735536	895.5492810139073	2	448.7816162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ITLTPVRP_	ENSG00000164877|ENST00000297508|MICALL2;ENST00000467394.5_1_7:1474234-1480903:-|nuORF;ENST00000472100.5_1_7:1474569-1480903:-|nuORF;nc|ENSG00000164877|Q8IY33-2|MICALL2;nc|ENSG00000164877|Q8IY33-3|MICALL2;nc|ENSG00000164877|Q8IY33-5|MICALL2	40.5726180659479	0.6527593143185008	2				NaN	NaN	0	NaN	3543	2845	6383
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6404	20.571	NaN	44412	30	0	9538.7	0.214	+			179	AALAKAIEK	9	91	457.78722155705844	913.5598901809169	2	457.78692626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AALAKAIEK_	ENSG00000108946|ENST00000589228|PRKAR1A;nc|ENSG00000108946|P10644-2|PRKAR1A	141.52041321563706	0.009766778904176347	2				NaN	NaN	0	NaN	3554	2848	6403
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6405	20.574	NaN	21180	30	0	2314.4	0.106	+			40076	STNPFRPQK	9	85	537.7882811393733	1073.5620093455466	2	537.78857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STNPFRPQK_	ENSG00000174021|ENST00000370645|GNG5;nc|ENSG00000133136|A0A804HLA8|GNG5B	125.81401957644128	0.01768009863045738	2				NaN	NaN	0	NaN	3555	2848	6403
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6406	20.576	NaN	29159	30	0	3625.9	0.106	+			35279	SALTDKAIVKK	11	88	587.3638225032746	1172.7130920733491	2	587.3638916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SALTDKAIVKK_	ENSG00000176485|ENST00000415826|PLAAT3;ENST00000394613.3_1_11:63342419-63381578:-|nuORF	166.29008070562384	3.8085089548897E-05	2				NaN	NaN	0	NaN	3556	2848	6403
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6407	20.578	NaN	18288	30	0	3134.8	0.106	+			15109	GTQPGPLLKK	10	89	519.8192342356814	1037.6239155381627	2	519.8192138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTQPGPLLKK_	ENSG00000123243|ENST00000397146|ITIH5;ENST00000476417.5_1_10:7615057-7659255:-|nuORF;ENST00000492668.5_1_10:7611547-7618533:-|nuORF;ITIH5|p.L690*|1|0.49|ENSG00000123243|chr10:7569749-7569749|G/-|frameshift_variant;nc|ENSG00000123243|Q86UX2-2|ITIH5;nc|ENSG00000123243|Q86UX2-3|ITIH5;nc|ENSG00000123243|Q86UX2-4|ITIH5;nc|ENSG00000123243|Q86UX2|ITIH5	95.4829727501206	0.09968275784893506	2				NaN	NaN	0	NaN	3557	2848	6403
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6408	20.58	NaN	10059	30	0	1426.3	0.106			+	19451	KARIFEPLG	9	75	515.804125265224	1029.593697597248	2	515.803955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KARIFEPLG_	REV__ENSG00000197893|ENST00000359988|NRAP;REV__nc|ENSG00000197893|Q86VF7-2|NRAP;REV__nc|ENSG00000197893|Q86VF7-3|NRAP;REV__nc|ENSG00000197893|Q86VF7-4|NRAP	73.97473282117947	0.12360187025703594	2				NaN	NaN	0	NaN	3558	2848	6403
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6409	20.582	NaN	6701.7	30	0	652.45	0.035	+			28798	NPHNGQVSY	9	70	508.2335012176778	1014.4524495021557	2	508.2334289550781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NPHNGQVSY_	ENSG00000104723|ENST00000503731|TUSC3;nc|ENSG00000104723|Q13454-2|TUSC3	65.80317337860623	0.1652391959156183	2				NaN	NaN	0	NaN	3559	2848	6403
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6410	20.582	NaN	10607	30	0	987.81	0.14	+			48424	VTISSVEKK	9	71	495.7952113678122	989.5758698024244	2	495.7948303222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VTISSVEKK_	ENSG00000143811|ENST00000343818|PYCR2	52.936696900407355	0.27249468807391813	2				NaN	NaN	0	NaN	3560	2848	6403
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6427	20.619	NaN	139510	30	0	30072	0.184			+	20251	KEMHTKLN	8	112	500.76551535718755	999.5164777811751	2	500.765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEMHTKLN_	REV__ANKRD18A|p.K865Rfs*16|1|0.35|ENSG00000180071|chr9:38577200-38577200|T/-|frameshift_variant;REV__ENSG00000180071|ENST00000399703|ANKRD18A;REV__ENSG00000230453|ENST00000684830|ANKRD18B;REV__ENST00000354752.5_1_9:99922575-99942308:-|nuORF;REV__nc|ENSG00000230453|A2A2Z9|ANKRD18B	94.00642277110589	0.2653416297186628	2				NaN	NaN	0	NaN	3574	2851	6426
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6428	20.622	NaN	146730	30	0	87920	0.106				-1	 	0	99	334.179473740043	999.516591820329	3	334.17962646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3575	2851	6426
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6429	20.625	NaN	78231	30	0	28991	0.106	+			48985	VVGKPIEVQK	10	102	366.22877585787285	1095.6644981738186	3	366.2289733886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVGKPIEVQK_	ENSG00000166391|ENST00000198801|MOGAT2;nc|ENSG00000166391|Q3SYC2-2|MOGAT2	66.9202029811203	0.3029018092171124	2				NaN	NaN	0	NaN	3576	2851	6426
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6430	20.626	NaN	134070	30	0	16437	0.106	+			974	AEKAYHEQL	9	106	544.771980195399	1087.529407457598	2	544.7724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEKAYHEQL_	ENSG00000075886|ENST00000321253|TUBA3D;ENSG00000123416|ENST00000336023|TUBA1B;ENSG00000127824|ENST00000248437|TUBA4A;ENSG00000152086|ENST00000312988|TUBA3E;ENSG00000167552|ENST00000301071|TUBA1A;ENSG00000167553|ENST00000301072|TUBA1C;ENSG00000183785|ENST00000330423|TUBA8;ENSG00000198033|ENST00000400113|TUBA3C;ENST00000437364.2_1_1:47358067-47358181:+|nuORF;ENST00000530835.1_1_11:90015825-90016947:+|nuORF;nc|ENSG00000123416|P68363-2|TUBA1B;nc|ENSG00000127824|P68366-2|TUBA4A;nc|ENSG00000167552|Q71U36-2|TUBA1A;nc|ENSG00000183785|Q9NY65-2|TUBA8;nc|ENSG00000198033|P0DPH7-2|TUBA3C;TUBA1A|p.I276V|1|0.05|ENSG00000167552|chr12:49185540-49185540|T/C|missense_variant;TUBA3C|p.T361Rfs*18|1|0.17|ENSG00000198033|chr13:19174136-19174136|G/-|frameshift_variant;TUBA3D|p.G366Efs*13|1|0.17|ENSG00000075886|chr2:131482588-131482588|G/-|frameshift_variant;TUBA3D|p.V328Pfs*54|1|0.45|ENSG00000075886|chr2:131480665-131480666|-/CCCAAAGA|frameshift_variant	166.0711670676379	0.003437550387609957	2				NaN	NaN	0	NaN	3577	2851	6426
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6431	20.628	NaN	27033	30	0	5541.2	0.106			+	45895	VAPRSCPT	8	73	415.713151780525	829.41175062785	2	415.7129821777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VAPRSCPT_	REV__ENST00000418310.5_1_7:73535775-73536204:+|nuORF	68.484700416344	0.4195245774506064	2				NaN	NaN	0	NaN	3578	2851	6426
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6432	20.63	NaN	8542.8	30	0	2559.9	0.106			+	41915	SVVGPVAAGPI	11	73	322.85865613378314	965.5541390015494	3	322.8587646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVVGPVAAGPI_	REV__ENSG00000049540|ENST00000252034|ELN;REV__nc|ENSG00000049540|P15502-1|ELN;REV__nc|ENSG00000049540|P15502-10|ELN;REV__nc|ENSG00000049540|P15502-11|ELN;REV__nc|ENSG00000049540|P15502-12|ELN;REV__nc|ENSG00000049540|P15502-13|ELN;REV__nc|ENSG00000049540|P15502-4|ELN;REV__nc|ENSG00000049540|P15502-5|ELN;REV__nc|ENSG00000049540|P15502-6|ELN;REV__nc|ENSG00000049540|P15502-7|ELN;REV__nc|ENSG00000049540|P15502-8|ELN;REV__nc|ENSG00000049540|P15502-9|ELN;REV__nc|ENSG00000049540|P15502|ELN	26.69291269510374	0.70980431218767	2				NaN	NaN	0	NaN	3579	2851	6426
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6433	20.632	NaN	18219	30	0	3822.8	0.035	+			15073	GTPPQKLPLG	10	89	336.5339368598552	1006.5799811797656	3	336.5341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GTPPQKLPLG_	nc|ENSG00000162105|Q9UPX8-2|SHANK2	26.69291269510374	0.6618461711292317	2				NaN	NaN	0	NaN	3580	2851	6426
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6447	20.661	NaN	31252	30	0	3530.8	0.212	+			6473	AVYLSTCKDSK	11	87	636.3179893916476	1270.6214258500952	2	636.318603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_AVYLSTC(Carbamidomethyl (C))KDSK_	ENSG00000231925|ENST00000434618|TAPBP;nc|ENSG00000231925|O15533-3|TAPBP;nc|ENSG00000231925|O15533-4|TAPBP	145.46060221211434	7.807117245964786E-05	2				NaN	NaN	0	NaN	3591	2854	6446
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6448	20.665	NaN	15824	30	0	5448.9	0.106			+	48982	VVGKGGLG	8	71	343.71465071114534	NaN	0	343.7146301269531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVGKGGLG_	REV__nc|ENSG00000196730|P53355-2|DAPK1	29.841539824830324	1.7418937515398478	2				NaN	NaN	0	NaN	3592	2854	6446
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6449	20.667	NaN	14295	30	0	1720.9	0.106	+			14753	GTKGPSNVFK	10	73	517.7855162879101	1033.5564796426202	2	517.78515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTKGPSNVFK_	ENSG00000039123|ENST00000230640|MTREX	84.31045756130733	0.1636476603981187	2				NaN	NaN	0	NaN	3593	2854	6446
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6450	20.669	NaN	34026	30	0	5849.5	0.106	+			14097	GSLGGQINK	9	76	437.24318959714896	872.4718262610979	2	437.2427673339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GSLGGQINK_	ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC;PRKDC|p.D2437Wfs*3|1|0.11|ENSG00000253729|chr8:47840161-47840162|-/CA|frameshift_variant;PRKDC|p.E1557Sfs*16|1|0.16|ENSG00000253729|chr8:47886051-47886051|C/-|frameshift_variant;PRKDC|p.G1227Vfs*50|2|0.31|ENSG00000253729|chr8:47893306-47893306|C/-|frameshift_variant;PRKDC|p.K3681Nfs*6|1|0.32|ENSG00000253729|chr8:47785174-47785177|TTCT/-|frameshift_variant;PRKDC|p.M3670*|1|0.5|ENSG00000253729|chr8:47785212-47785212|T/-|frameshift_variant;PRKDC|p.M3846Cfs*12|1|0.13|ENSG00000253729|chr8:47779047-47779047|T/-|frameshift_variant;PRKDC|p.M4020Cfs*2|1|0.31|ENSG00000253729|chr8:47776968-47776968|T/-|frameshift_variant;PRKDC|p.N3605Kfs*3|1|0.22|ENSG00000253729|chr8:47788993-47788994|-/T|frameshift_variant;PRKDC|p.N4037Ifs*15|1|0.17|ENSG00000253729|chr8:47776916-47776916|T/-|frameshift_variant;PRKDC|p.R2704Gfs*13|2|0.34|ENSG00000253729|chr8:47834238-47834238|T/-|frameshift_variant;PRKDC|p.S3402Ifs*16|1|0.04|ENSG00000253729|chr8:47799302-47799303|-/AAACCGTGAGTTAGAGGAGGTAA|frameshift_variant;PRKDC|p.S4099Qfs*6|1|0.25|ENSG00000253729|chr8:47774265-47774265|A/-|frameshift_variant;PRKDC|p.T3268Pfs*7|1|0.5|ENSG00000253729|chr8:47803426-47803426|T/-|frameshift_variant;PRKDC|p.W3401Cfs*4|1|0.01|ENSG00000253729|chr8:47799304-47799305|-/AATGAATA|frameshift_variant	211.38894812892048	4.691605655969127E-08	2				NaN	NaN	0	NaN	3594	2854	6446
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6451	20.671	NaN	17698	30	0	1570.3	0.106	+			42794	TEALNHHNL	9	82	524.7623626878224	1047.5101724424446	2	524.7623901367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TEALNHHNL_	ENSG00000179344|ENST00000434651|HLA-DQB1;ENSG00000232629|ENST00000437316|HLA-DQB2;ENST00000487676.1_1_6:32629660-32630092:-|nuORF;nc|ENSG00000179344|P01920|HLA-DQB1;nc|ENSG00000232629|P05538-2|HLA-DQB2;nc|ENSG00000232629|P05538|HLA-DQB2	71.87747018426188	0.13267044672804276	2				NaN	NaN	0	NaN	3595	2854	6446
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6452	20.672	NaN	7094.6	30	0	1485.4	0.037	+			14009	GSFDKFKEK	9	69	362.5255515993618	1084.5548253982854	3	362.5257263183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GSFDKFKEK_	ENST00000535459.5_1_6:160103527-160109299:-|nuORF;ENST00000541573.5_1_6:160103527-160113001:-|nuORF;ENST00000546260.5_1_6:160103527-160113680:-|nuORF;nc|ENSG00000291237|P04179-2|SOD2;nc|ENSG00000291237|P04179-4|SOD2;nc|ENSG00000291237|P04179|SOD2	30.317721548370564	0.5199124245378496	2				NaN	NaN	0	NaN	3596	2854	6446
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6453	20.673	NaN	20713	30	0	6044.4	0.143	+			15405	GTYGLDSVKKK	11	81	598.3379538732776	1194.661354813355	2	598.3377075195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GTYGLDSVKKK_	ENSG00000087338|ENST00000282570|GMCL1	126.02560380233024	0.008598064468488318	2				NaN	NaN	0	NaN	3597	2854	6446
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6469	20.707	NaN	96693	30	0	21000	0.211	+			14321	GSYSKAFAR	9	125	493.7565926441922	985.4986323551844	2	493.75628662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSYSKAFAR_	ENSG00000005175|ENST00000005386|RPAP3;nc|ENSG00000005175|Q9H6T3-2|RPAP3;nc|ENSG00000005175|Q9H6T3-3|RPAP3	178.54760496737404	0.0014418427517892064	2				NaN	NaN	0	NaN	3610	2857	6468
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6470	20.711	NaN	40426	30	0	5785.5	0.106	+			36631	SGGPLIVHK	9	81	454.27177250454656	906.5289920758931	2	454.2715148925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SGGPLIVHK_	ENSG00000243649|ENST00000425368|CFB;ENST00000482312.1_1_6:31918808-31919804:+|nuORF	131.03138772384656	0.014687601201650916	2				NaN	NaN	0	NaN	3611	2857	6468
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6471	20.713	NaN	19024	30	0	3020.2	0.106	+			48728	VTVADHIQK	9	78	505.7853555035366	NaN	0	505.78515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTVADHIQK_	ENSG00000181789|ENST00000314797|COPG1	101.25262130126117	0.018912469721856617	2				NaN	NaN	0	NaN	3612	2857	6468
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6472	20.715	NaN	29946	30	0	12823	0.106	+			31018	QETHLKQQL	9	83	562.8068443267613	1123.5991357203225	2	562.8069458007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QETHLKQQL_	ENSG00000084652|ENST00000373610|TXLNA	93.1432384553994	0.056003526918089595	2				NaN	NaN	0	NaN	3613	2857	6468
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6473	20.717	NaN	10577	30	0	1605	0.106	+			37967	SPHGGALVM	9	76	442.7182193109345	883.421885688669	2	442.7182312011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_SPHGGALVM(Oxidation (M))_	ENSG00000164880|ENST00000404767|INTS1	47.91560031466742	0.327412564698279	2				NaN	NaN	0	NaN	3614	2857	6468
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6474	20.718	NaN	18103	30	0	2790.8	0.035			+	13444	GLIEKSSRPG	10	82	522.2970287434958	1042.5795045537916	2	523.303955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GLIEKSSRPG_	REV__ENSG00000120549|ENST00000376454|KIAA1217;REV__KIAA1217|p.D155Mfs*19|1|0.27|ENSG00000120549|chr10:24380973-24380973|G/-|frameshift_variant;REV__KIAA1217|p.G1042Efs*92|1|0.09|ENSG00000120549|chr10:24531867-24531867|G/-|frameshift_variant;REV__KIAA1217|p.N1661Tfs*23|1|0.07|ENSG00000120549|chr10:24544247-24544247|A/-|frameshift_variant;REV__KIAA1217|p.Q1199Kfs*12|1|0.25|ENSG00000120549|chr10:24542749-24542749|C/-|frameshift_variant;REV__KIAA1217|p.R976Gfs*16|1|0.31|ENSG00000120549|chr10:24527958-24527958|A/-|frameshift_variant;REV__KIAA1217|p.R976Kfs*8|1|0.4|ENSG00000120549|chr10:24527957-24527958|-/A|frameshift_variant;REV__KIAA1217|p.Y714Ifs*4|1|0.27|ENSG00000120549|chr10:24513391-24513392|-/A|frameshift_variant;REV__nc|ENSG00000120549|Q5T5P2-10|KIAA1217;REV__nc|ENSG00000120549|Q5T5P2-2|KIAA1217;REV__nc|ENSG00000120549|Q5T5P2-7|KIAA1217	56.72105179125745	0.3956618550748046	2				NaN	NaN	0	NaN	3615	2857	6468
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6475	20.719	NaN	8481.3	30	0	1130.4	0.141	+			7888	DRQQTLAIR	9	77	550.812116112918	1099.609679292636	2	550.8124389648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DRQQTLAIR_	tr|U7T3Z6|U7T3Z6_FUSNUSmallribosomalsubunitproteinuS7OS=FusobacteriumnucleatumCTI-5OX=1316586GN=rpsGPE=3SV=1	67.49366992349736	0.1516260258713357	2				NaN	NaN	0	NaN	3616	2857	6468
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6493	20.758	NaN	18525	30	0	1962.3	0.214	+			5237	ATVAGVHVK	9	70	441.2639039793538	880.5132550255076	2	441.2637939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATVAGVHVK_	ENSG00000232838|ENST00000432901|PET117	125.81401957644128	0.01768009863045738	2				NaN	NaN	0	NaN	3631	2860	6492
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6494	20.762	NaN	22564	30	0	3322.9	0.106	+			44129	TQATIYVHK	9	91	530.7932638088538	1059.5719746845075	2	530.7936401367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TQATIYVHK_	ENSG00000090686|ENST00000308271|USP48;nc|ENSG00000090686|Q86UV5-2|USP48;nc|ENSG00000090686|Q86UV5-5|USP48;nc|ENSG00000090686|Q86UV5-8|USP48;USP48|p.L982Ffs*9|1|0.08|ENSG00000090686|chr1:21690037-21690038|-/GG|frameshift_variant	163.1509380574825	0.003936019289634439	2				NaN	NaN	0	NaN	3632	2860	6492
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6495	20.764	NaN	11261	30	0	2073.2	0.106	+			13800	GQLSVHTPK	9	74	483.7718888299765	965.529224726753	2	483.7720642089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GQLSVHTPK_	ENSG00000114861|ENST00000649528|FOXP1;nc|ENSG00000285708|Q9H334-3|FOXP1;nc|ENSG00000285708|Q9H334-4|FOXP1;nc|ENSG00000285708|Q9H334-6|FOXP1;nc|ENSG00000285708|Q9H334-7|FOXP1;nc|ENSG00000285708|Q9H334-8|FOXP1	89.02883481214508	0.06760336634167786	2				NaN	NaN	0	NaN	3633	2860	6492
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6496	20.766	NaN	28012	30	0	4434.4	0.106	+			5192	ATTLPIRNK	9	97	507.3087878184399	1012.6030227036798	2	507.3090515136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATTLPIRNK_	ANKRD17|p.K886Sfs*4|1|0.39|ENSG00000132466|chr4:73139959-73139959|T/-|frameshift_variant;ANKRD17|p.L2249Yfs*84|1|0.34|ENSG00000132466|chr4:73090884-73090884|G/-|frameshift_variant;ENSG00000132466|ENST00000358602|ANKRD17;ENST00000514252.1_1_4:73978989-74017230:-|nuORF;nc|ENSG00000132466|O75179-2|ANKRD17;nc|ENSG00000132466|O75179-3|ANKRD17;nc|ENSG00000132466|O75179-4|ANKRD17;nc|ENSG00000132466|O75179-6|ANKRD17;nc|ENSG00000132466|O75179-7|ANKRD17	91.26522074875469	0.06129826844580791	2				NaN	NaN	0	NaN	3634	2860	6492
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6497	20.768	NaN	21677	30	0	4736.1	0.106			+	47198	VLYLEELNRL	10	96	421.24320719179315	1260.7077921755795	3	421.24322509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VLYLEELNRL_	REV__ENSG00000171488|ENST00000370454|LRRC8C	47.657333605630114	0.47858658696240314	2				NaN	NaN	0	NaN	3635	2860	6492
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6498	20.769	NaN	14122	30	0	5025.7	0.036	+			14754	GTKGPSNVFK	10	87	345.5257586082585	1033.5554464249756	3	345.5258483886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTKGPSNVFK_	ENSG00000039123|ENST00000230640|MTREX	61.76455937419982	0.3497917639301274	2				NaN	NaN	0	NaN	3636	2860	6492
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6499	20.77	NaN	23584	30	0	7225.3	0.14			+	18496	ISHITENSI	9	90	338.5134595016184	1012.5185491050552	3	338.513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ISHITENSI_	REV__ABCA13|p.A4442Pfs*3|1|0.06|ENSG00000179869|chr7:48506365-48506365|G/-|frameshift_variant;REV__ABCA13|p.K3855Nfs*139|1|0.3|ENSG00000179869|chr7:48389131-48389153|GGCTGTGGTCCAAGACCTCAGCC/-|frameshift_variant;REV__ENSG00000179869|ENST00000435803|ABCA13;REV__nc|ENSG00000179869|Q86UQ4-3|ABCA13;REV__nc|ENSG00000179869|Q86UQ4-4|ABCA13;REV__nc|ENSG00000179869|Q86UQ4-5|ABCA13;REV__nc|ENSG00000179869|Q86UQ4-6|ABCA13;REV__nc|ENSG00000179869|Q86UQ4-7|ABCA13;REV__nc|ENSG00000179869|Q86UQ4|ABCA13	35.61828744233558	0.47037581924408073	2				NaN	NaN	0	NaN	3637	2860	6492
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6517	20.809	NaN	46237	30	0	33823	0.214			+	13515	GLPSYNIN	8	66	439.2242607604717	876.4339685877434	2	439.2239685058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GLPSYNIN_	REV__MORC4|p.I318Nfs*19|1|0.07|ENSG00000133131|chrX:106978183-106978184|-/GTAGTTAATAT|frameshift_variant	60.97194046774394	0.49215940876911696	2				NaN	NaN	0	NaN	3652	2863	6516
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6518	20.813	NaN	49754	30	0	19497	0.106	+			3814	ATAGPKRISL	10	87	338.54140570433776	1012.6023877132134	3	338.54156494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATAGPKRISL_	ENST00000369331.8_1_10:115439067-115480867:+|nuORF	33.921630207806714	0.6028135429846169	2				NaN	NaN	0	NaN	3653	2863	6516
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6519	20.815	NaN	9186.7	30	0	2092.3	0.106	+			5783	AVGTLQEAK	9	70	458.7583982079143	915.5022434826286	2	458.75811767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVGTLQEAK_	ENSG00000168453|ENST00000381418|HR;nc|ENSG00000168453|O43593-2|HR	96.0336014099291	0.047854655524928534	2				NaN	NaN	0	NaN	3654	2863	6516
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6520	20.817	NaN	10842	30	0	4135.8	0.106	+			216	AALRPLVKPK	10	82	364.91300934813034	1091.717198644591	3	364.91314697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AALRPLVKPK_	ENSG00000144713|ENST00000429711|RPL32;ENST00000452606.2_1_3:12880846-12881736:-|nuORF	61.691277971877994	0.35045824941635534	2				NaN	NaN	0	NaN	3655	2863	6516
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6521	20.819	NaN	12751	30	0	1713.6	0.106	+			18792	ITQYPHAVGK	10	77	557.305956023011	1112.597359112822	2	557.3062744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ITQYPHAVGK_	ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656-2|DDOST;nc|ENSG00000244038|P39656-3|DDOST;nc|ENSG00000244038|P39656|DDOST	91.26522074875469	0.12383023862516404	2				NaN	NaN	0	NaN	3656	2863	6516
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6522	20.821	NaN	17148	30	0	6331.9	0.036	+			12336	GDKETFIASE	10	88	548.7595596294711	1095.5045663257422	2	548.7599487304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GDKETFIASE_	ENSG00000132510|ENST00000448097|KDM6B;nc|ENSG00000132510|O15054-1|KDM6B	51.19269402634007	0.44601001148513897	2				NaN	NaN	0	NaN	3657	2863	6516
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6523	20.821	NaN	10239	30	0	1918.1	0.143	+			32024	QRMVASVPFVK	11	71	631.3590309579664	1260.7035089827327	2	631.3565673828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QRMVASVPFVK_	ENSG00000204764|ENST00000523189|RANBP17;ENST00000522380.2_1_5:170346486-170397534:+|nuORF;nc|ENSG00000204764|Q9H2T7-2|RANBP17;RANBP17|p.N641Tfs*35|2|0.1|ENSG00000204764|chr5:171183218-171183218|A/-|frameshift_variant	50.79123845855914	0.4102859592092987	2				NaN	NaN	0	NaN	3658	2863	6516
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6539	20.856	NaN	8763.5	30	0	1513	0.214	+			42416	TAKRGIFGK	9	62	326.5343517474065	976.5812258424196	3	326.5344543457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAKRGIFGK_	EML6|p.N1675Mfs*7|2|0.32|ENSG00000214595|chr2:54962572-54962572|A/-|frameshift_variant;EML6|p.R1767Efs*19|1|0.37|ENSG00000214595|chr2:54964127-54964127|C/-|frameshift_variant;ENSG00000214595|ENST00000356458|EML6;nc|ENSG00000214595|Q6ZMW3-2|EML6	21.68575002086885	0.60058278597072	2				NaN	NaN	0	NaN	3671	2866	6538
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6540	20.86	NaN	13522	30	0	3879.1	0.106			+	47152	VLRSHGITI	9	74	332.53784686681485	994.5917112006446	3	332.53802490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VLRSHGITI_	REV__ENST00000469471.1_1_3:39144861-39149032:-|nuORF	26.69291269510374	0.5537881896960711	2				NaN	NaN	0	NaN	3672	2866	6538
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6541	20.862	NaN	12966	30	0	2401	0.106	+			32200	QSVQEHEV	8	70	478.22899344865954	954.4434339641191	2	478.22869873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QSVQEHEV_	ENSG00000056558|ENST00000373887|TRAF1;TRAF1|p.N275Kfs*8|1|0.26|ENSG00000056558|chr9:120911394-120911395|-/T|frameshift_variant	49.44154591367651	0.597725784090933	2				NaN	NaN	0	NaN	3673	2866	6538
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6542	20.864	NaN	8982.1	30	0	1206	0.106	+			13804	GQMLQPIIE	9	72	514.7773864321981	NaN	0	514.77783203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GQMLQPIIE_	ENSG00000031003|ENST00000689681|FAM13B;FAM13B|p.F782Lfs*18|2|0.29|ENSG00000031003|chr5:137943145-137943145|A/-|frameshift_variant;nc|ENSG00000031003|Q9NYF5-2|FAM13B;nc|ENSG00000031003|Q9NYF5-3|FAM13B;nc|ENSG00000031003|Q9NYF5|FAM13B	71.29570347882199	0.10120983364817086	2				NaN	NaN	0	NaN	3674	2866	6538
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6543	20.866	NaN	15148	30	0	5392.3	0.106	+			15234	GTSTGIISK	9	58	432.24542607927225	862.4762992253445	2	432.2451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTSTGIISK_	ENSG00000116141|ENST00000366917|MARK1;nc|ENSG00000116141|Q9P0L2-2|MARK1;nc|ENSG00000116141|Q9P0L2-3|MARK1	90.60085204095205	0.06317133949006545	2				NaN	NaN	0	NaN	3675	2866	6538
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6544	20.868	NaN	25845	30	0	6694.8	0.034	+			46804	VIAESVVKK	9	87	486.80800333830297	971.601453743406	2	486.8078308105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VIAESVVKK_	ENSG00000112367|ENST00000230124|FIG4	124.08010499294276	0.018729767491916592	2				NaN	NaN	0	NaN	3676	2866	6538
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6545	20.868	NaN	5318.5	30	0	892.85	0.138	+			13372	GLAPPQPR	8	53	418.24313911209157	834.4717252909832	2	418.2427062988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GLAPPQPR_	ENST00000321930.4_17:78977795-78978311:+|nuORF	50.0245360154114	0.5941082100236891	2				NaN	NaN	0	NaN	3677	2866	6538
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6558	20.898	NaN	102710	30	0	21208	0.178	+			47515	VQNGKHFKF	9	85	552.801040571592	1103.587528209984	2	552.8014526367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VQNGKHFKF_	ENSG00000163586|ENST00000295834|FABP1	163.1509380574825	0.003936019289634439	2				NaN	NaN	0	NaN	3687	2869	6557
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6559	20.901	NaN	39998	30	0	3936	0.106	+			36787	SICGKMFKK	9	92	549.7932033383386	1097.571853743477	2	549.793701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SIC(Carbamidomethyl (C))GKMFKK_	ENSG00000105732|ENST00000359044|ZNF574;nc|ENSG00000105732|Q6ZN55-2|ZNF574	87.69643885390035	0.07135982304947239	2				NaN	NaN	0	NaN	3688	2869	6557
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6560	20.903	NaN	28726	30	0	4093.9	0.106	+			41823	SVSTFLKKK	9	82	519.3215122249325	1036.6284715166648	2	519.321533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVSTFLKKK_	DDX60|p.F1672Lfs*25|1|0.08|ENSG00000137628|chr4:168220678-168220678|A/-|frameshift_variant;DDX60|p.T1194Pfs*8|1|0.22|ENSG00000137628|chr4:168252634-168252634|T/-|frameshift_variant;ENSG00000137628|ENST00000393743|DDX60	91.26522074875469	0.06129826844580791	2				NaN	NaN	0	NaN	3689	2869	6557
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6561	20.905	NaN	28166	30	0	9099.7	0.106	+			41159	SVKIHLEVL	9	70	346.54977990196824	1036.6275103061048	3	346.5499267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVKIHLEVL_	ENSG00000174948|ENST00000389740|GPR149	26.69291269510374	0.5537881896960711	2				NaN	NaN	0	NaN	3690	2869	6557
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6562	20.907	NaN	58706	30	0	9377.7	0.106			+	-1	RAMGIRQKE	9	93	368.86965018583453	1103.5871211577037	3	368.8697509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_RAM(Oxidation (M))GIRQKE_	REV__ENSG00000101986|ENST00000218104|ABCD1	62.107414245175825	0.1960472003779324	2				NaN	NaN	0	NaN	3691	2869	6557
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6563	20.908	NaN	34866	30	0	9611.1	0.106				-1	 	0	80	614.36268772477	1226.71082251634	2	614.3621826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3692	2869	6557
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6564	20.91	NaN	21532	30	0	7935.9	0.033	+			43647	TIRVPKAG	8	65	421.26652127336774	840.5184896135355	2	421.26617431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TIRVPKAG_	ENSG00000111667|ENST00000229268|USP5;nc|ENSG00000111667|P45974-2|USP5;USP5|p.F362Lfs*66|1|0.04|ENSG00000111667|chr12:6859493-6859494|-/A|frameshift_variant;USP5|p.P723Lfs*6|1|0.17|ENSG00000111667|chr12:6864114-6864114|C/-|frameshift_variant	37.15910966729921	0.6739408393984688	2				NaN	NaN	0	NaN	3693	2869	6557
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6575	20.935	NaN	927870	30	0	227390	0.122	+			5526	AVAIKAMAK	9	82	451.77792710449177	901.5413012757836	2	451.7784729003906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVAIKAMAK_	EIF5A|p.A145P|1|0.15|ENSG00000132507|chr17:7311608-7311608|G/C|missense_variant;ENSG00000132507|ENST00000336458|EIF5A;ENSG00000253626|ENST00000520547|EIF5AL1;nc|ENSG00000132507|P63241-2|EIF5A	143.10689835833298	0.00902249513149409	2				NaN	NaN	0	NaN	3701	2872	6574
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6576	20.938	NaN	47974	30	0	11015	0.106				-1	 	0	83	330.5305784029001	988.5699058089003	3	330.53076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3702	2872	6574
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6577	20.94	NaN	33542	30	0	4612.6	0.106	+			44898	TTYPQTTIRK	10	86	604.8357625612508	1207.6569721893015	2	604.8352661132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TTYPQTTIRK_	ENSG00000124429|ENST00000262753|POF1B;nc|ENSG00000124429|Q8WVV4-1|POF1B;nc|ENSG00000124429|Q8WVV4-3|POF1B	155.5846463517096	0.00750394161302585	2				NaN	NaN	0	NaN	3703	2872	6574
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6578	20.941	NaN	14982	30	0	3951.8	0.106	+			39902	STLTVAVKK	9	85	473.8003009372665	945.586048941333	2	473.79998779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STLTVAVKK_	ENSG00000137261|ENST00000378214|KIAA0319;nc|ENSG00000137261|Q5VV43-2|KIAA0319;nc|ENSG00000137261|Q5VV43-3|KIAA0319;nc|ENSG00000137261|Q5VV43-4|KIAA0319	104.74654710444128	0.034358562718640136	2				NaN	NaN	0	NaN	3704	2872	6574
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6579	20.943	NaN	15459	30	0	1692.6	0.106	+			50774	YEKRMATEV	9	77	563.7812487466383	1125.5479445600765	2	563.78271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YEKRMATEV_	ENSG00000137154|ENST00000380394|RPS6;ENST00000497406.2_1_12:59414000-59414099:+|nuORF	101.25262130126117	0.03792372629710479	2				NaN	NaN	0	NaN	3705	2872	6574
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6580	20.945	NaN	6720.5	30	0	1232.4	0.106	+			46344	VEKPAETHL	9	67	341.8536136708723	1022.5390116128169	3	341.85369873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VEKPAETHL_	ENSG00000198171|ENST00000354488|DDRGK1;nc|ENSG00000198171|Q96HY6-2|DDRGK1	42.396135135203025	0.392153681582562	2				NaN	NaN	0	NaN	3706	2872	6574
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6581	20.947	NaN	15734	30	0	6752.6	0.106	+			30759	QDPIRVAQ	8	63	463.7576116842966	925.5006704353932	2	463.7572021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QDPIRVAQ_	ENST00000368966.9_3_6:109615628-109650288:+|nuORF	52.936696900407355	0.5717071646657654	2				NaN	NaN	0	NaN	3707	2872	6574
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6582	20.949	NaN	3548.4	30	0	956.71	0.039			+	29864	PLFFFFLLAL	10	54	409.910545929585	1226.709808388955	3	409.9102783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_PLFFFFLLAL_	REV__ENST00000495676.5_1_1:154227274-154227361:+|nuORF	31.529811441608018	0.6223461015008678	2				NaN	NaN	0	NaN	3708	2872	6574
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6594	20.974	NaN	11341	30	0	3070.3	0.214			+	18377	IQTMGIKK	8	72	459.77531338014995	917.5360738270999	2	459.7747497558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IQTMGIKK_	REV__tr|U7T4Y3|U7T4Y3_FUSNULargeribosomalsubunitproteinuL3OS=FusobacteriumnucleatumCTI-5OX=1316586GN=rplCPE=3SV=1	76.7741389293348	0.3504530765139327	2				NaN	NaN	0	NaN	3717	2875	6593
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6595	20.978	NaN	13580	30	0	2357	0.106	+			24784	LIFTESKRK	9	74	561.3376767013633	1120.6608004695265	2	561.3378295898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LIFTESKRK_	ENST00000446957.6_2_13:33110995-33111067:-|nuORF	118.74307786436346	0.02196067127630568	2				NaN	NaN	0	NaN	3718	2875	6593
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6596	20.98	NaN	5598.4	30	0	1729.5	0.106			+	30520	QAHEADLE	8	56	456.70646940625016	911.3983858793003	2	456.7062072753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QAHEADLE_	REV__ENSG00000047579|ENST00000344537|DTNBP1;REV__ENST00000506844.1_1_6:15524658-15660633:-|nuORF;REV__ENST00000510395.5_1_6:15523208-15651611:-|nuORF;REV__ENST00000513680.5_1_6:15524894-15660633:-|nuORF;REV__ENST00000514651.1_1_6:15524658-15533714:-|nuORF;REV__nc|ENSG00000047579|Q96EV8-2|DTNBP1;REV__nc|ENSG00000047579|Q96EV8-3|DTNBP1	31.954861631926434	0.7126016770032289	2				NaN	NaN	0	NaN	3719	2875	6593
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6597	20.982	NaN	3009.8	30	0	280.38	0.106			+	2799	ARSRRGGK	8	57	444.26703263822014	886.5195123432403	2	444.2666931152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ARSRRGGK_	REV__ENST00000406638.6_1_11:1892044-1892302:+|nuORF	38.80614096846853	0.6637206697844082	2				NaN	NaN	0	NaN	3720	2875	6593
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6598	20.983	NaN	10213	30	0	1389.4	0.106			+	21464	KNGKIIDHL	9	79	519.3093327589729	1036.6041125847457	2	519.3097534179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KNGKIIDHL_	REV__ENSG00000094975|ENST00000263688|SUCO;REV__nc|ENSG00000094975|Q9UBS9-2|SUCO	68.78682469695295	0.14603441672067394	2				NaN	NaN	0	NaN	3721	2875	6593
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6599	20.985	NaN	5471.8	30	0	1488.2	0.106	+			13610	GLWVNTRT	8	67	473.7597914531343	NaN	0	473.7603454589844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GLWVNTRT_	ENST00000419640.1_1_2:192108745-192110761:-|nuORF	42.47446043378293	1.7418937515398478	2				NaN	NaN	0	NaN	3722	2875	6593
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6600	20.987	NaN	43404	30	0	23596	0.032				-1	 	0	75	384.7721421422516	767.5297313513032	2	384.772216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3723	2875	6593
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6615	21.018	NaN	21891	30	0	2727.1	0.214	+			12276	GAYDGKFEK	9	89	507.74839078825534	1013.4822286433107	2	507.74822998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GAYDGKFEK_	ENSG00000196363|ENST00000358625|WDR5;WDR5|p.V217Cfs*4|5|0.4|ENSG00000196363|chr9:134154476-134154476|C/-|frameshift_variant	99.01295224348159	0.040209060045561164	2				NaN	NaN	0	NaN	3735	2878	6614
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6616	21.021	NaN	11564	30	0	3672.4	0.106	+			12277	GAYDGKFEK	9	67	338.8343296944396	1013.4811596835189	3	338.8345947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GAYDGKFEK_	ENSG00000196363|ENST00000358625|WDR5;WDR5|p.V217Cfs*4|5|0.4|ENSG00000196363|chr9:134154476-134154476|C/-|frameshift_variant	32.81241826257853	0.4965981579233955	2				NaN	NaN	0	NaN	3736	2878	6614
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6617	21.024	NaN	20492	30	0	4960.1	0.106			+	3188	ASKKIEGKF	9	77	336.5339368598552	1006.5799811797656	3	336.5342712402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASKKIEGKF_	REV__tr|U7SUA5|U7SUA5_FUSNUOligopeptidaseFOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01160PE=3SV=1	34.172542307311794	0.4838870758800184	2				NaN	NaN	0	NaN	3737	2878	6614
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6618	21.025	NaN	15207	30	0	3505.2	0.106	+			14033	GSGKVTFPK	9	84	460.7638870424628	919.5132211517256	2	460.76361083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GSGKVTFPK_	AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK	112.10723106719422	0.02684780151337622	2				NaN	NaN	0	NaN	3738	2878	6614
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6619	21.027	NaN	17512	30	0	5721.9	0.106	+			34640	RVQEAVESMVK	11	82	646.3376080016563	1290.6606630701126	2	646.337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_RVQEAVESM(Oxidation (M))VK_	ENSG00000035141|ENST00000430566|FAM136A;ENST00000460307.1_1_2:70528513-70529143:-|nuORF;ENST00000498665.1_1_2:70527944-70529143:-|nuORF;nc|ENSG00000035141|Q96C01|FAM136A	115.23196543181992	0.02934640941715571	2				NaN	NaN	0	NaN	3739	2878	6614
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6620	21.029	NaN	23058	30	0	8817.7	0.034	+			15258	GTTGAVLGQK	10	82	466.26411696470916	930.5136809962183	2	466.26373291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTTGAVLGQK_	ENSG00000198643|ENST00000358781|FAM3D;FAM3D|p.G139Vfs*16|1|0.28|ENSG00000198643|chr3:58637183-58637183|C/-|frameshift_variant	150.36159442982594	0.008431331982545942	2				NaN	NaN	0	NaN	3740	2878	6614
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6621	21.03	NaN	11822	30	0	1472.4	0.142	+			47667	VSDPSSPQYGK	11	81	582.780362500894	1163.5461720685878	2	582.7804565429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VSDPSSPQYGK_	ENSG00000166340|ENST00000299427|TPP1;ENST00000428886.6_1_11:6638445-6640631:-|nuORF;TPP1|p.I484Sfs*4|1|0.24|ENSG00000166340|chr11:6614968-6614968|C/-|frameshift_variant	97.59673978297657	0.06767575942783079	2				NaN	NaN	0	NaN	3741	2878	6614
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6634	21.057	NaN	17012	30	0	3267.1	0.214	+			49367	VVSSVVKVK	9	72	472.810779430543	943.607005927886	2	472.8104553222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVSSVVKVK_	ENSG00000100722|ENST00000251038|ZC3H14;nc|ENSG00000100722|Q6PJT7-10|ZC3H14;nc|ENSG00000100722|Q6PJT7-11|ZC3H14;nc|ENSG00000100722|Q6PJT7-2|ZC3H14;nc|ENSG00000100722|Q6PJT7-3|ZC3H14;nc|ENSG00000100722|Q6PJT7-4|ZC3H14;nc|ENSG00000100722|Q6PJT7-5|ZC3H14;nc|ENSG00000100722|Q6PJT7-9|ZC3H14;ZC3H14|p.K307Nfs*48|1|0.26|ENSG00000100722|chr14:88574746-88574746|A/-|frameshift_variant	98.62937762414208	0.04060045538121712	2				NaN	NaN	0	NaN	3751	2881	6633
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6635	21.061	NaN	38538	30	0	18303	0.106	+			20395	KETEIVKKL	9	100	363.22875775172554	1086.6644438553767	3	363.22882080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KETEIVKKL_	ENSG00000115816|ENST00000234170|CEBPZ	106.88024417677582	0.032181361622142884	2				NaN	NaN	0	NaN	3752	2881	6633
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6636	21.063	NaN	15115	30	0	1508.3	0.106	+			40482	STYATTIRDSK	11	85	621.8198786335347	1241.6252043338693	2	621.8201293945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STYATTIRDSK_	ENSG00000127054|ENST00000435064|INTS11;ENST00000421495.6_1_1:1249445-1259984:-|nuORF;ENST00000470030.6_1_1:1248876-1250311:-|nuORF;ENST00000488042.6_1_1:1250056-1259988:-|nuORF;ENST00000531020.1_1_1:1249679-1250311:-|nuORF;nc|ENSG00000127054|Q5TA45-2|INTS11;nc|ENSG00000127054|Q5TA45-3|INTS11;nc|ENSG00000127054|Q5TA45-4|INTS11;nc|ENSG00000127054|Q5TA45-5|INTS11	144.69833601371718	0.0001356525017137265	2				NaN	NaN	0	NaN	3753	2881	6633
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6637	21.065	NaN	11399	30	0	2498	0.106			+	38185	SQCVCYPA	8	73	492.69911368710126	983.3836744410025	2	492.6991882324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_SQC(Carbamidomethyl (C))VC(Carbamidomethyl (C))YPA_	REV__ENST00000258382.9_2_2:231084642-231084825:-|nuORF	47.91560031466742	0.6071945918984287	2				NaN	NaN	0	NaN	3754	2881	6633
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6638	21.067	NaN	22486	30	0	2643.8	0.106	+			20396	KETEIVKKL	9	86	544.340077431996	1086.6656019307918	2	544.3402099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KETEIVKKL_	ENSG00000115816|ENST00000234170|CEBPZ	173.39201167336012	0.002187917786942103	2				NaN	NaN	0	NaN	3755	2881	6633
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6639	21.068	NaN	15441	30	0	4079.8	0.106			+	23186	KWRCKQNQ	8	72	545.7834345985503	1089.5523162639006	2	545.7837524414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KWRCKQNQ_	REV__ENSG00000167208|ENST00000330943|SNX20;REV__nc|ENSG00000167208|Q7Z614-2|SNX20;REV__nc|ENSG00000167208|Q7Z614-3|SNX20;REV__nc|ENSG00000167208|Q7Z614-4|SNX20	63.30626980617807	0.4690498839812213	2				NaN	NaN	0	NaN	3756	2881	6633
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6640	21.07	NaN	4477.3	30	0	950.45	0.034			+	31578	QLRCAPPGE	9	59	485.74266623924944	NaN	0	485.7428283691406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QLRCAPPGE_	REV__ENSG00000173338|ENST00000340313|KCNK7;REV__nc|ENSG00000173338|Q9Y2U2-2|KCNK7;REV__nc|ENSG00000173338|Q9Y2U2-3|KCNK7	44.116797842482775	0.2472372736944149	2				NaN	NaN	0	NaN	3757	2881	6633
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6654	21.099	NaN	9505	30	0	1077.3	0.214	+			28227	NAVSVHHAL	9	70	474.2566303985271	946.4987078638542	2	474.2566223144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAVSVHHAL_	ENSG00000156011|ENST00000327040|PSD3;ENST00000518315.5_1_8:18393255-18632402:-|nuORF;nc|ENSG00000156011|Q9NYI0-3|PSD3;nc|ENSG00000156011|Q9NYI0|PSD3;PSD3|p.D956Rfs*11|1|0.17|ENSG00000156011|chr8:18556274-18556275|-/G|frameshift_variant;PSD3|p.D956Tfs*14|1|0.29|ENSG00000156011|chr8:18556275-18556275|G/-|frameshift_variant	117.81106730687013	0.02252488733980868	2				NaN	NaN	0	NaN	3768	2884	6653
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6655	21.103	NaN	7980.1	30	0	2497.8	0.106			+	37825	SMPVRTGPR	9	69	334.1830267827029	999.5272509483086	3	334.18328857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SMPVRTGPR_	REV__ENST00000372242.7_1_1:45101583-45102057:-|nuORF	21.9598887501803	0.5980208138527809	2				NaN	NaN	0	NaN	3769	2884	6653
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6656	21.105	NaN	5548.2	30	0	719.22	0.106	+			39712	STIPPHVQK	9	61	503.78753399973186	1005.5605150662637	2	503.7877502441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STIPPHVQK_	ENSG00000163513|ENST00000295754|TGFBR2;nc|ENSG00000163513|P37173-2|TGFBR2;nc|ENSG00000163513|P37173-3|TGFBR2;TGFBR2|p.H523Rfs*19|1|0.27|ENSG00000163513|chr3:30691458-30691459|-/GACC|frameshift_variant	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	3770	2884	6653
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6657	21.107	NaN	5927.1	30	0	1130.6	0.106				-1	WTTMSRKK	8	64	527.2792475613433	1052.5439421894864	2	527.280029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_WTTM(Oxidation (M))SRKK_	ENST00000367889.7_1_1:165600262-165600346:+|nuORF	35.61828744233558	0.6843154725607303	2				NaN	NaN	0	NaN	3771	2884	6653
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6658	21.109	NaN	4773.6	30	0	884.49	0.106				-1	ELSLGQCQK	9	64	531.7641889990375	1061.513825064875	2	531.7627563476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_ELSLGQC(Carbamidomethyl (C))QK_	ENST00000285402.3_1_8:103563909-103564047:+|nuORF	47.657333605630114	0.33044192980041115	2				NaN	NaN	0	NaN	3772	2884	6653
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6659	21.11	NaN	3394.8	30	0	744.8	0.033			+	4788	ATNKIPSH	8	61	434.2377168619498	866.4608807906997	2	434.2380676269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATNKIPSH_	REV__ENSG00000204131|ENST00000633930|NHSL2	37.15910966729921	0.6739408393984688	2				NaN	NaN	0	NaN	3773	2884	6653
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6660	21.111	NaN	2686.5	30	0	967.54	0.138			+	1170	AENGTGLLL	9	51	444.2454412614117	886.4763295896234	2	444.2454833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AENGTGLLL_	REV__ENSG00000142207|ENST00000382751|URB1	30.503639358989545	0.5181749237905803	2				NaN	NaN	0	NaN	3774	2884	6653
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6673	21.14	NaN	5730.1	30	0	684.68	0.214			+	18464	ISERTAIVL	9	61	501.30266528342645	1000.5907776336529	2	501.3030090332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ISERTAIVL_	REV__ENSG00000159267|ENST00000674895|HLCS;REV__nc|ENSG00000159267|P50747|HLCS	58.78195531508484	0.22376836668196862	2				NaN	NaN	0	NaN	3784	2887	6672
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6674	21.144	NaN	5975.7	30	0	631.84	0.106			+	-1	TCMIIMSF	8	75	538.728178539964	1075.441804146728	2	538.7286987304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term),Carbamidomethyl (C),2 Oxidation (M)	_(Acetyl (Protein N-term))TC(Carbamidomethyl (C))M(Oxidation (M))IIM(Oxidation (M))SF_	REV__ENSG00000196876|ENST00000627620|SCN8A;REV__nc|ENSG00000196876|Q9UQD0-3|SCN8A;REV__nc|ENSG00000196876|Q9UQD0-4|SCN8A;REV__nc|ENSG00000196876|Q9UQD0-5|SCN8A;REV__nc|ENSG00000196876|Q9UQD0|SCN8A;REV__SCN8A|p.H131R|1|0.49|ENSG00000196876|chr12:51684289-51684289|A/G|missense_variant	40.5726180659479	0.6527593143185008	2				NaN	NaN	0	NaN	3785	2887	6672
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6675	21.146	NaN	6568.5	30	0	785.89	0.106				-1	AGAMTLCITN	10	69	534.2475164304515	1066.4804799277028	2	534.2474975585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_AGAM(Oxidation (M))TLC(Carbamidomethyl (C))ITN_	ENSG00000164933|ENST00000297578|SLC25A32	58.22992032128504	0.38193887838457763	2				NaN	NaN	0	NaN	3786	2887	6672
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6676	21.148	NaN	8517.9	30	0	944.75	0.106			+	19892	KEEVKSLK	8	74	480.7896151884643	959.5646774437287	2	480.7896728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEEVKSLK_	REV__ENSG00000271321|ENST00000470691|CTAGE6	139.97047562133406	0.25797680915057813	2				NaN	NaN	0	NaN	3787	2887	6672
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6677	21.15	NaN	5891.2	30	0	1500.9	0.106			+	14069	GSKGWGWKVR	10	67	580.8194005471133	1159.6242481610266	2	580.8193969726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GSKGWGWKVR_	REV__ENST00000371142.8_1_10:98280477-98280525:-|nuORF	35.15202426646627	0.5927656479315102	2				NaN	NaN	0	NaN	3788	2887	6672
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6678	21.151	NaN	5180.1	30	0	505.11	0.106				-1	ITCLKNGW	8	71	496.2538607956709	990.4931686581418	2	496.2530517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_ITC(Carbamidomethyl (C))LKNGW_	CON__Q28085	38.80614096846853	0.6637206697844082	2				NaN	NaN	0	NaN	3789	2887	6672
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6679	21.153	NaN	6244.8	30	0	832.11	0.036			+	50175	WLGTISSIFG	10	75	540.789048171196	1079.5635434091919	2	541.2764282226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_WLGTISSIFG_	REV__ENSG00000153246|ENST00000283243|PLA2R1;REV__nc|ENSG00000153246|Q13018-2|PLA2R1	32.75053402867276	0.6123771875927935	2				NaN	NaN	0	NaN	3790	2887	6672
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6692	21.181	NaN	42992	30	0	21010	0.215	+			30882	QEKEQIKTL	9	76	558.816633600367	1115.618714267534	2	558.8168334960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QEKEQIKTL_	CON__H-INV:HIT000292931;CON__P05787;CON__Q9H552;ENSG00000170421|ENST00000692008|KRT8;ENST00000409686.2_1_9:102067468-102068890:+|nuORF;ENST00000472924.1_1_3:160285772-160286174:+|nuORF;ENST00000550170.5_1_12:53294858-53298765:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	117.81106730687013	0.02252488733980868	2				NaN	NaN	0	NaN	3800	2890	6691
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6693	21.185	NaN	62126	30	0	29492	0.106	+			9337	EILDRLKTE	9	94	372.8800323661616	1115.6182676986848	3	372.88006591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EILDRLKTE_	ENSG00000103494|ENST00000647211|RPGRIP1L;nc|ENSG00000103494|Q68CZ1-2|RPGRIP1L;RPGRIP1L|p.D821*|1|0.35|ENSG00000103494|chr16:53645847-53645848|-/A|frameshift_variant	37.81151784470057	0.4459294069877048	2				NaN	NaN	0	NaN	3801	2890	6691
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6694	21.187	NaN	17028	30	0	1697.3	0.106	+			42010	SVYRGSLTQR	10	85	583.8179216193217	1165.6212903054434	2	583.8178100585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVYRGSLTQR_	ENSG00000115648|ENST00000264605|MLPH;ENST00000477457.1_1_2:238455116-238462232:+|nuORF;nc|ENSG00000115648|Q9BV36-2|MLPH;nc|ENSG00000115648|Q9BV36-3|MLPH;nc|ENSG00000115648|Q9BV36-5|MLPH	66.96192283764107	0.30252237217063654	2				NaN	NaN	0	NaN	3802	2890	6691
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6695	21.189	NaN	9535.8	30	0	912.48	0.106	+			18064	IIYQGQYKK	9	73	570.8246963923325	1139.634839851465	2	570.8247680664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IIYQGQYKK_	ENSG00000104613|ENST00000397977|INTS10	82.30502934623384	0.08758161712619916	2				NaN	NaN	0	NaN	3803	2890	6691
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6696	21.19	NaN	8152.4	30	0	1898.4	0.106	+			9729	EMVMLVAPF	9	67	518.764566770843	1035.5145806084859	2	518.7643432617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EMVMLVAPF_	ENST00000428780.2_1_10:1068608-1089667:+|nuORF;ENST00000437374.5_1_10:1068715-1089667:+|nuORF	37.028477286268924	0.45511415925449533	2				NaN	NaN	0	NaN	3804	2890	6691
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6697	21.192	NaN	4605	30	0	815.67	0.106				-1	 	0	59	358.22251178722826	357.21523532062827	1	358.22332763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3805	2890	6691
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6698	21.194	NaN	10117	30	0	790.15	0.035	+			48739	VTVEVVGKGK	10	78	508.3112097047337	1014.6078664762674	2	508.31072998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VTVEVVGKGK_	ENSG00000100697|ENST00000343455|DICER1;ENST00000527416.2_1_14:95555309-95557645:-|nuORF;nc|ENSG00000100697|Q9UPY3-3|DICER1	112.84542089569574	0.03954945403314285	2				NaN	NaN	0	NaN	3806	2890	6691
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6712	21.223	NaN	25332	30	0	2465.5	0.214	+			37528	SLLQDKQQL	9	93	536.8038592627005	1071.5931655922009	2	536.8042602539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLLQDKQQL_	ENSG00000100983|ENST00000651619|GSS;nc|ENSG00000100983|P48637-2|GSS	172.24860141594272	0.002383092361811508	2				NaN	NaN	0	NaN	3817	2893	6711
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6713	21.227	NaN	42252	30	0	5143.3	0.106			+	-1	RSAQCYALK	9	87	548.7829830446268	1095.5514131560535	2	548.7835083007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_RSAQC(Carbamidomethyl (C))YALK_	REV__ENSG00000221813|ENST00000641698|OR6B1	58.78195531508484	0.22376836668196862	2				NaN	NaN	0	NaN	3818	2893	6711
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6714	21.229	NaN	31716	30	0	4571	0.106	+			49775	VYQNHVQHL	9	98	569.2939786054195	1136.573404277639	2	569.2944946289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYQNHVQHL_	ARHGAP5|p.E893*|2|0.24|ENSG00000100852|chr14:32093338-32093339|-/T|frameshift_variant;ARHGAP5|p.F892Lfs*9|2|0.33|ENSG00000100852|chr14:32093339-32093339|T/-|frameshift_variant;ARHGAP5|p.F935Lfs*5|1|0.32|ENSG00000100852|chr14:32093469-32093469|T/-|frameshift_variant;ARHGAP5|p.N943Kfs*10|1|0.43|ENSG00000100852|chr14:32093489-32093490|-/A|frameshift_variant;ARHGAP5|p.S936*|1|0.32|ENSG00000100852|chr14:32093468-32093469|-/T|frameshift_variant;ARHGAP5|p.Y502Mfs*3|1|0.31|ENSG00000100852|chr14:32092168-32092168|T/-|frameshift_variant;ENSG00000100852|ENST00000345122|ARHGAP5;nc|ENSG00000100852|Q13017-2|ARHGAP5	99.37495909608758	0.03983967222258828	2				NaN	NaN	0	NaN	3819	2893	6711
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6715	21.231	NaN	16987	30	0	1768.2	0.106	+			39488	STFIGRAAAK	10	76	511.2932610595903	1020.5719691859806	2	511.2934265136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STFIGRAAAK_	ENSG00000101361|ENST00000329276|NOP56;ENST00000466447.5_1_20:2636822-2638033:+|nuORF;ENST00000490753.1_1_20:2637050-2637903:+|nuORF;ENST00000492135.5_1_20:2636822-2638937:+|nuORF	85.86182877749512	0.1547657473298402	2				NaN	NaN	0	NaN	3820	2893	6711
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6716	21.232	NaN	20083	30	0	2866.6	0.106			+	20877	KINYSFITL	9	89	366.8768105879422	NaN	0	366.8768615722656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KINYSFITL_	REV__HERV35I-int_dup77|chr3:106541134-106546233:+|1.3860853119714591|0.1976016791882729|2.81|468.0|117|2|sense	39.252832667884924	0.27938773122138094	2				NaN	NaN	0	NaN	3821	2893	6711
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6717	21.234	NaN	7158	30	0	747.14	0.036	+			40897	SVFNHAIRH	9	72	540.789048171196	1079.5635434091919	2	540.789306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVFNHAIRH_	ENSG00000273749|ENST00000617928|CYFIP1;KBTBD2-CYFIP1|1|fusion	85.86182877749512	0.07653218437724067	2				NaN	NaN	0	NaN	3822	2893	6711
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6718	21.235	NaN	13871	30	0	1790.7	0.139	+			31854	QPTYLARV	8	72	474.26918266413475	946.5238123950695	2	474.2689514160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QPTYLARV_	ABCC10|p.L662Cfs*38|1|0.25|ENSG00000124574|chr6:43438647-43438647|G/-|frameshift_variant;ABCC10|p.Q583Rfs*41|1|0.34|ENSG00000124574|chr6:43435885-43435885|C/-|frameshift_variant;ENSG00000124574|ENST00000372530|ABCC10;nc|ENSG00000124574|Q5T3U5-2|ABCC10	71.29570347882199	0.39610197767395533	2				NaN	NaN	0	NaN	3823	2893	6711
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6736	21.274	NaN	19612	30	0	4505.7	0.214	+			6449	AVYGGFKSK	9	80	478.76348694412087	955.5124209550418	2	478.76324462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVYGGFKSK_	ENSG00000196616|ENST00000305046|ADH1B;nc|ENSG00000196616|P00325-2|ADH1B	122.1759843771914	0.019882474861609503	2				NaN	NaN	0	NaN	3838	2896	6735
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6737	21.278	NaN	46099	30	0	4941.4	0.106	+			8341	EAKSTMICMNG	11	94	621.2694326460247	1240.5243123588493	2	621.2695922851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_EAKSTMIC(Carbamidomethyl (C))MNG_	ENST00000369393.7_1_6:90513083-90513194:-|nuORF	76.16968421966216	0.18430501143391895	2				NaN	NaN	0	NaN	3839	2896	6735
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6738	21.28	NaN	101670	30	0	12093	0.106	+			14203	GSSDVIIHR	9	102	492.26755538582574	982.5205578384515	2	492.2666931152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GSSDVIIHR_	ENSG00000070047|ENST00000264555|PHRF1;ENST00000532550.1_1_11:601671-606691:+|nuORF;nc|ENSG00000070047|Q9P1Y6-2|PHRF1;nc|ENSG00000070047|Q9P1Y6-3|PHRF1;PHRF1|p.E1225Kfs*62|1|0.36|ENSG00000070047|chr11:609125-609125|G/-|frameshift_variant;PHRF1|p.L1393Cfs*8|1|0.38|ENSG00000070047|chr11:609628-609628|C/-|frameshift_variant;PHRF1|p.P938Qfs*23|2|0.45|ENSG00000070047|chr11:608263-608263|C/-|frameshift_variant;PHRF1|p.T1126Pfs*73|1|0.36|ENSG00000070047|chr11:608827-608827|C/-|frameshift_variant	139.97047562133406	0.010493916756945389	2				NaN	NaN	0	NaN	3840	2896	6735
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6739	21.282	NaN	9289.9	30	0	1104.4	0.106	+			23491	LAGAHSSL	8	69	378.2058457259201	754.3971385186402	2	378.2058410644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LAGAHSSL_	ENSG00000105223|ENST00000409735|PLD3	52.29916861842294	0.578018602984656	2				NaN	NaN	0	NaN	3841	2896	6735
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6740	21.283	NaN	15636	30	0	2365.6	0.106				-1	 	0	76	602.2808970548241	601.273620588224	1	602.280517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3842	2896	6735
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6741	21.285	NaN	12698	30	0	1808.6	0.037	+			33054	REKETKALSL	10	76	587.8432923209683	1173.6720317087365	2	587.843017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_REKETKALSL_	ENSG00000100345|ENST00000216181|MYH9;ENSG00000133026|ENST00000360416|MYH10;ENSG00000133392|ENST00000300036|MYH11;nc|ENSG00000100345|P35579-2|MYH9;nc|ENSG00000133026|P35580-2|MYH10;nc|ENSG00000133026|P35580-3|MYH10;nc|ENSG00000133026|P35580-5|MYH10;nc|ENSG00000133026|P35580|MYH10;nc|ENSG00000133392|P35749-2|MYH11;nc|ENSG00000133392|P35749-3|MYH11;nc|ENSG00000133392|P35749-4|MYH11;SYNDIG1-MYH9|1|fusion	89.02883481214508	0.13663399911061233	2				NaN	NaN	0	NaN	3843	2896	6735
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6742	21.286	NaN	16072	30	0	6517.3	0.142			+	23154	KVYDSVNVKK	10	82	590.3404081751892	1178.6662634171782	2	590.3403930664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KVYDSVNVKK_	REV__tr|U7T4G2|U7T4G2_FUSNU4-hydroxy-3-methylbut-2-enyldiphosphatereductaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=ispHPE=3SV=1	47.95952297671804	0.47580206326914537	2				NaN	NaN	0	NaN	3844	2896	6735
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6756	21.317	NaN	85116	30	0	9596.5	0.177				-1	 	0	88	535.2572824469213	1068.5000119606425	2	535.2572631835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3855	2899	6755
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6757	21.32	NaN	64334	30	0	25423	0.106			+	33321	RGSFLTLRK	9	92	539.3305635961366	1076.646574259073	2	539.330810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RGSFLTLRK_	REV__ENSG00000176903|ENST00000316836|PNMA1	40.05817265558897	0.419577045485086	2				NaN	NaN	0	NaN	3856	2899	6755
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6758	21.322	NaN	14202	30	0	2038.6	0.106	+			8244	EAFREHQQY	9	81	604.2788830895644	1206.5432132459287	2	604.2786865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EAFREHQQY_	ENSG00000133106|ENST00000313624|EPSTI1;ENST00000535677.5_1_13:43491732-43537592:-|nuORF;EPSTI1|p.L289Sfs*24|1|0.42|ENSG00000133106|chr13:42895092-42895093|-/A|frameshift_variant;nc|ENSG00000133106|Q96J88-3|EPSTI1;nc|ENSG00000133106|Q96J88|EPSTI1	107.00750918261382	0.032051501805654005	2				NaN	NaN	0	NaN	3857	2899	6755
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6759	21.324	NaN	7975.3	30	0	572.37	0.106	+			1836	AIISVTKSK	9	70	473.8004245222892	945.5862961113784	2	473.80035400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AIISVTKSK_	ENSG00000105171|ENST00000585603|POP4	90.60085204095205	0.06317133949006545	2				NaN	NaN	0	NaN	3858	2899	6755
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6760	21.326	NaN	9977.7	30	0	1847	0.106	+			8589	ECARRMKK	8	73	511.27188240104033	NaN	0	511.2715759277344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ECARRMKK_	ENSG00000197530|ENST00000355826|MIB2;ENST00000470373.1_1_1:1564879-1565907:+|nuORF;ENST00000479659.5_1_1:1561777-1565907:+|nuORF;ENST00000506488.5_1_1:1562112-1565907:+|nuORF;ENST00000511502.5_1_1:1563563-1565907:+|nuORF;nc|ENSG00000197530|Q96AX9-3|MIB2;nc|ENSG00000197530|Q96AX9-4|MIB2;nc|ENSG00000197530|Q96AX9-5|MIB2;nc|ENSG00000197530|Q96AX9-6|MIB2;nc|ENSG00000197530|Q96AX9-7|MIB2	53.351449002276354	1.7418937515398478	2				NaN	NaN	0	NaN	3859	2899	6755
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6761	21.328	NaN	13355	30	0	1887.7	0.106				-1	 	0	70	420.2408234186489	838.4670939040979	2	420.2404479980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3860	2899	6755
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6762	21.33	NaN	15779	30	0	3673.7	0.035			+	38371	SRSASGSAER	10	59	504.2464986820748	1006.4784444309496	2	504.2464599609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SRSASGSAER_	REV__CNOT11|p.A26S|1|0.59|ENSG00000158435|chr2:101253040-101253040|G/T|missense_variant	35.15202426646627	0.5927656479315102	2				NaN	NaN	0	NaN	3861	2899	6755
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6774	21.355	NaN	99518	30	0	35895	0.153			+	20568	KFSSTSTASY	10	89	539.7567893787428	1077.4990258242856	2	539.7566528320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KFSSTSTASY_	REV__ENSG00000113163|ENST00000643780|CERT1;REV__nc|ENSG00000113163|Q9Y5P4-2|CERT1;REV__nc|ENSG00000113163|Q9Y5P4-3|CERT1	60.11826168202944	0.36476464221954025	2				NaN	NaN	0	NaN	3870	2902	6773
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6775	21.358	NaN	48862	30	0	12195	0.106	+			5695	AVFASEVKK	9	80	489.78503158281035	977.5555102324207	2	489.78472900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVFASEVKK_	ENSG00000105202|ENST00000221801|FBL;FBL|p.K318Rfs*2|1|0.09|ENSG00000105202|chr19:39834553-39834553|G/-|frameshift_variant	136.26810882979174	0.012230845423532208	2				NaN	NaN	0	NaN	3871	2902	6773
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6776	21.36	NaN	13160	30	0	1362.8	0.106	+			44725	TTLNSPPLKK	10	79	549.8300524119688	1097.6455518907376	2	549.8302612304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TTLNSPPLKK_	B2M|p.V69Wfs*34|1|0.32|ENSG00000166710|chr15:44715555-44715555|A/-|frameshift_variant	109.47833844074708	0.04954876308859735	2				NaN	NaN	0	NaN	3872	2902	6773
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6777	21.362	NaN	24201	30	0	4214.6	0.106	+			16835	HPDTGISSKAM	11	89	572.2772545039055	1142.539956074611	2	572.2771606445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HPDTGISSKAM_	ENSG00000124635|ENST00000339812|H2BC11;ENSG00000146047|ENST00000274764|H2BC1;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000196890|ENST00000693095|H2BC26;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000436555.1_1_1:228651947-228652295:-|nuORF;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;nc|ENSG00000203814|Q5QNW6-2|H2BC18	81.52500206392136	0.13965942453989383	2				NaN	NaN	0	NaN	3873	2902	6773
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6778	21.364	NaN	7185.8	30	0	540.26	0.106	+			35550	SAVSQSKEL	9	68	474.7538483528772	947.4931437725544	2	474.7535095214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SAVSQSKEL_	ENSG00000136603|ENST00000259119|SKIL;ENST00000490894.1_1_3:170102333-170102591:+|nuORF;nc|ENSG00000136603|P12757-3|SKIL;nc|ENSG00000136603|P12757-5|SKIL	78.26377905018397	0.10505600812668463	2				NaN	NaN	0	NaN	3874	2902	6773
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6779	21.365	NaN	9462.8	30	0	3254.1	0.106			+	-1	AKSCPTLLPL	10	69	367.2107608629003	1098.610453188901	3	367.5453796386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_AKSC(Carbamidomethyl (C))PTLLPL_	REV__ENSG00000157557|ENST00000360938|ETS2	21.68575002086885	0.7027366847906487	2				NaN	NaN	0	NaN	3875	2902	6773
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6780	21.367	NaN	6922.1	30	0	1962.4	0.033	+			43024	TEKSTVPV	8	56	430.74025831136817	859.4659636895364	2	430.7399597167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TEKSTVPV_	ENSG00000109814|ENST00000316423|UGDH;nc|ENSG00000109814|O60701-3|UGDH;UGDH|p.M432Nfs*20|1|0.29|ENSG00000109814|chr4:39503954-39503955|-/T|frameshift_variant;UGDH|p.V371Yfs*6|1|0.34|ENSG00000109814|chr4:39505298-39505298|T/-|frameshift_variant	53.351449002276354	0.5676011784961348	2				NaN	NaN	0	NaN	3876	2902	6773
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6781	21.368	NaN	9712.1	30	0	1440.5	0.14			+	41341	SVLTVKLKQ	9	87	508.32953360142125	1014.6445142696425	2	508.32952880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_SVLTVKLKQ_	REV__ERICH5|p.V67_S68insTLV|1|0.12|ENSG00000177459|chr8:98089214-98089215|-/AGTTACTTT|inframe_insertion	70.39856735676683	0.13906523160059378	2				NaN	NaN	0	NaN	3877	2902	6773
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6794	21.397	NaN	10273	30	0	1383.8	0.214	+			44560	TTAQLQVQK	9	82	508.7909269330807	1015.5673009329614	2	508.79083251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTAQLQVQK_	ENSG00000127603|ENST00000564288|MACF1;nc|ENSG00000127603|O94854|MACF1;nc|ENSG00000127603|Q9UPN3-2|MACF1;nc|ENSG00000127603|Q9UPN3-3|MACF1;nc|ENSG00000127603|Q9UPN3-4|MACF1;nc|ENSG00000127603|Q9UPN3-5|MACF1;nc|ENSG00000127603|Q9UPN3|MACF1	120.30596017624542	0.02101454110788768	2				NaN	NaN	0	NaN	3887	2905	6793
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6795	21.401	NaN	13321	30	0	3146.6	0.106	+			28490	NGPVSHSSL	9	64	449.2244412504884	896.4343295677768	2	449.224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NGPVSHSSL_	ENSG00000122482|ENST00000337393|ZNF644;nc|ENSG00000122482|Q9H582-2|ZNF644;ZNF644|p.K1068Lfs*15|1|0.05|ENSG00000122482|chr1:90937971-90937972|-/GTAG|frameshift_variant;ZNF644|p.K193Nfs*16|1|0.42|ENSG00000122482|chr1:90940775-90940775|T/-|frameshift_variant	148.04295825190792	0.0073252839830139265	2				NaN	NaN	0	NaN	3888	2905	6793
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6796	21.403	NaN	14879	30	0	2695.2	0.106	+			43338	TGATLYLLR	9	73	336.5339368598552	1006.5799811797656	3	336.5342712402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TGATLYLLR_	ENSG00000189043|ENST00000339600|NDUFA4;ENST00000486007.1_1_7:10977674-10979684:-|nuORF;NDUFA4|p.A37T|1|0.4|ENSG00000189043|chr7:10938830-10938830|C/T|missense_variant	24.20275056022122	0.577060078256802	2				NaN	NaN	0	NaN	3889	2905	6793
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6797	21.405	NaN	7601.1	30	0	2308.2	0.106			+	21133	KKSMRSIY	8	66	338.1914944398186	1011.5526539196558	3	338.19183349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KKSMRSIY_	REV__ENST00000368654.7_1_10:129914037-129921160:-|nuORF;REV__ENST00000478293.1_1_10:129914037-129924496:-|nuORF	20.481830146152948	0.8005983782650069	2				NaN	NaN	0	NaN	3890	2905	6793
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6798	21.407	NaN	7116.4	30	0	2324.5	0.106			+	30948	QEMKPIQAK	9	58	358.19881619488547	1071.5746191848564	3	358.1989440917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QEMKPIQAK_	REV__ENSG00000043093|ENST00000292782|DCUN1D1	35.61828744233558	0.47037581924408073	2				NaN	NaN	0	NaN	3891	2905	6793
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6799	21.408	NaN	7245.1	30	0	1009.5	0.106	+			36252	SENEKLQKL	9	74	544.8014773769995	1087.588401820799	2	544.8017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SENEKLQKL_	ENSG00000088808|ENST00000202556|PPP1R13B;PPP1R13B|p.L233Ffs*4|1|0.31|ENSG00000088808|chr14:103753129-103753130|-/A|frameshift_variant	89.02883481214508	0.06760336634167786	2				NaN	NaN	0	NaN	3892	2905	6793
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6800	21.41	NaN	11835	30	0	5940.8	0.036			+	47566	VRFVSHLKQ	9	74	557.3283888445349	1112.6422247558696	2	557.3289794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VRFVSHLKQ_	REV__AGTR2|p.R330H|1|0.09|ENSG00000180772|chrX:116173269-116173269|G/A|missense_variant	37.81151784470057	0.4459294069877048	2				NaN	NaN	0	NaN	3893	2905	6793
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6813	21.438	NaN	74744	30	0	21679	0.214	+			37104	SISSGPIQK	9	79	458.75871909470317	915.5028852562064	2	458.7585754394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SISSGPIQK_	ENSG00000006611|ENST00000005226|USH1C;nc|ENSG00000006611|Q9Y6N9-2|USH1C;nc|ENSG00000006611|Q9Y6N9-3|USH1C;nc|ENSG00000006611|Q9Y6N9-4|USH1C;nc|ENSG00000006611|Q9Y6N9|USH1C	143.8867514904718	0.008656634767784652	2				NaN	NaN	0	NaN	3903	2908	6812
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6814	21.442	NaN	23996	30	0	4478.9	0.106	+			15825	GVYTGKLSEK	10	82	541.2986212771526	1080.5826896211051	2	541.2987670898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GVYTGKLSEK_	ENST00000375743.8_1_1:16299537-16302484:-|nuORF	122.93914200107957	0.02317863035582428	2				NaN	NaN	0	NaN	3904	2908	6812
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6815	21.444	NaN	16134	30	0	1555.4	0.106	+			33629	RLTSWSRW	8	86	546.2932551832512	1090.5719574333023	2	546.294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RLTSWSRW_	ENST00000238823.12_1_2:33824236-33824305:-|nuORF	87.75429964447693	0.2842685068779738	2				NaN	NaN	0	NaN	3905	2908	6812
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6816	21.446	NaN	16917	30	0	1775.6	0.106	+			3143	ASHYIHIVK	9	90	356.53810079413563	NaN	0	356.5381774902344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASHYIHIVK_	ENSG00000159921|ENST00000642385|GNE;nc|ENSG00000159921|Q9Y223-2|GNE;nc|ENSG00000159921|Q9Y223-3|GNE;nc|ENSG00000159921|Q9Y223-4|GNE;nc|ENSG00000159921|Q9Y223-5|GNE	58.78195531508484	0.1545138866451181	2				NaN	NaN	0	NaN	3906	2908	6812
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6817	21.447	NaN	9719.2	30	0	880.03	0.106	+			40612	SVAKIAQYK	9	82	504.2974623173581	1006.5803717015162	2	504.2976379394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVAKIAQYK_	ENSG00000138750|ENST00000264883|NUP54;ENST00000504173.1_1_4:77045750-77069514:-|nuORF;ENST00000508465.5_1_4:77038865-77051838:-|nuORF;ENST00000508604.5_1_4:77039101-77051958:-|nuORF;nc|ENSG00000138750|Q7Z3B4-3|NUP54	98.58198989935565	0.04066992115528678	2				NaN	NaN	0	NaN	3907	2908	6812
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6818	21.449	NaN	8790.7	30	0	752.45	0.106	+			48651	VTSQVSNLK	9	73	488.27744943545235	974.5403459377047	2	488.277099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTSQVSNLK_	ENSG00000132952|ENST00000255304|USPL1;nc|ENSG00000132952|Q5W0Q7-2|USPL1	117.81106730687013	0.02252488733980868	2				NaN	NaN	0	NaN	3908	2908	6812
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6819	21.451	NaN	14408	30	0	1989.6	0.036	+			3142	ASHYIHIVK	9	72	534.3036193395651	1066.59268574593	2	534.3041381835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASHYIHIVK_	ENSG00000159921|ENST00000642385|GNE;nc|ENSG00000159921|Q9Y223-2|GNE;nc|ENSG00000159921|Q9Y223-3|GNE;nc|ENSG00000159921|Q9Y223-4|GNE;nc|ENSG00000159921|Q9Y223-5|GNE	93.19546047674547	0.05585629608842056	2				NaN	NaN	0	NaN	3909	2908	6812
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6833	21.481	NaN	25886	30	0	3327	0.215	+			48240	VTCSQVHFK	9	82	553.2763883772649	1104.5382238213297	2	553.27685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_VTC(Carbamidomethyl (C))SQVHFK_	ENSG00000174442|ENST00000307897|ZWILCH;nc|ENSG00000174442|Q9H900-2|ZWILCH	93.5975768576971	0.05472259948179787	2				NaN	NaN	0	NaN	3920	2911	6832
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6834	21.484	NaN	22176	30	0	2451.8	0.106	+			39623	STICKYYQK	9	77	595.7970042485065	1189.5794555638129	2	595.7971801757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_STIC(Carbamidomethyl (C))KYYQK_	ENSG00000075975|ENST00000170447|MKRN2	98.62937762414208	0.04060045538121712	2				NaN	NaN	0	NaN	3921	2911	6832
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6835	21.486	NaN	16339	30	0	2407.6	0.106	+			40911	SVFQQGMKNK	10	80	583.8031654903214	1165.5917780474426	2	583.8034057617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVFQQGMKNK_	ENSG00000018625|ENST00000361216|ATP1A2;ENSG00000105409|ENST00000648268|ATP1A3;ENSG00000163399|ENST00000295598|ATP1A1;ENST00000479960.1_1_1:116943772-116944278:+|nuORF;nc|ENSG00000105409|P13637-2|ATP1A3;nc|ENSG00000105409|P13637-3|ATP1A3;nc|ENSG00000163399|P05023-3|ATP1A1;nc|ENSG00000163399|P05023-4|ATP1A1	171.33049012695201	0.003262457723401657	2				NaN	NaN	0	NaN	3922	2911	6832
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6836	21.488	NaN	28259	30	0	4457.3	0.106	+			43637	TIQSGEQPYK	10	81	575.7907856930415	1149.5670184528828	2	575.7909545898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TIQSGEQPYK_	ENSG00000168653|ENST00000372969|NDUFS5	109.82975700811294	0.04850514657194457	2				NaN	NaN	0	NaN	3923	2911	6832
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6837	21.49	NaN	9572.3	30	0	1861.2	0.106				-1	 	0	59	470.7378778462395	939.461202759279	2	470.7375793457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3924	2911	6832
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6838	21.492	NaN	14625	30	0	1205.6	0.035	+			46318	VEKHVVQSI	9	82	519.80103067027	1037.58750840734	2	519.8007202148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VEKHVVQSI_	ENSG00000116459|ENST00000369722|ATP5PB;ENST00000402768.1_1_6:139935577-139935790:-|nuORF;ENST00000567330.1_1_16:75743035-75743521:-|nuORF	83.6470233535746	0.08277643980271215	2				NaN	NaN	0	NaN	3925	2911	6832
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6839	21.493	NaN	7312.2	30	0	1170.9	0.14			+	-1	MELTCKVI	8	73	505.2569730033788	1008.4993930735576	2	505.2565002441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))ELTC(Carbamidomethyl (C))KVI_	REV__ENST00000517856.5_3_8:62573885-62574080:-|nuORF	44.116797842482775	0.6307669463330267	2				NaN	NaN	0	NaN	3926	2911	6832
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6854	21.526	NaN	15832	30	0	3024.1	0.214	+			38738	SSLNHIVEK	9	76	513.7828339641171	1025.5511149950341	2	513.7828979492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSLNHIVEK_	ENSG00000143624|ENST00000318967|INTS3;ENST00000491790.1_1_1:153733326-153733395:+|nuORF;nc|ENSG00000143624|Q68E01-3|INTS3;nc|ENSG00000143624|Q68E01|INTS3	152.06079943815163	0.00638878961959199	2				NaN	NaN	0	NaN	3938	2914	6853
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6855	21.529	NaN	24053	30	0	2384.5	0.106	+			16245	HEEKVFRAV	9	90	372.2048435667937	1113.5927013005812	3	372.20501708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HEEKVFRAV_	ENSG00000095139|ENST00000264028|ARCN1;nc|ENSG00000095139|P48444-2|ARCN1	42.86426827375447	0.38666266728046506	2				NaN	NaN	0	NaN	3939	2914	6853
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6856	21.532	NaN	25436	30	0	3826.3	0.106	+			45261	TVQGKVFER	9	86	532.2988602269264	1062.5831675206528	2	532.2993774414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVQGKVFER_	ENSG00000090382|ENST00000261267|LYZ	99.78786539795823	0.03941834715970116	2				NaN	NaN	0	NaN	3940	2914	6853
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6857	21.533	NaN	6879.6	30	0	830.21	0.106	+			46275	VEHKVETF	8	66	494.7588292299652	NaN	0	494.7587890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VEHKVETF_	ENSG00000171863|ENST00000645674|RPS7;ENST00000444127.1_1_1:68708159-68708657:-|nuORF;ENST00000484240.1_1_17:44798950-44799232:-|nuORF	101.60071028292904	1.7418937515398478	2				NaN	NaN	0	NaN	3941	2914	6853
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6858	21.535	NaN	7836.2	30	0	2610	0.106	+			36690	SGPTARAL	8	64	386.71919490082433	771.4238368684487	2	386.7193908691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SGPTARAL_	ENSG00000198488|ENST00000622824|B3GNT6;nc|ENSG00000198488|Q6ZMB0-3|B3GNT6	54.776311868738084	0.5534952410049249	2				NaN	NaN	0	NaN	3942	2914	6853
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6859	21.537	NaN	9124.2	30	0	945.83	0.039	+			34051	RSMEAHNILSK	11	84	643.3376137718651	1284.6606746105301	2	643.3383178710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RSMEAHNILSK_	ENSG00000160075|ENST00000291386|SSU72;ENST00000378725.3_1_1:1480120-1509937:-|nuORF;nc|ENSG00000160075|Q9NP77-2|SSU72;SSU72|p.L82Ffs*8|1|0.34|ENSG00000160075|chr1:1544981-1544982|-/A|frameshift_variant	99.73179938255973	0.06124157796180628	2				NaN	NaN	0	NaN	3943	2914	6853
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6860	21.538	NaN	9785.5	30	0	951.69	0.142	+			27728	MQLGVHYSK	9	89	539.7724139007634	1077.5302748683266	2	539.7719116210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_M(Oxidation (M))QLGVHYSK_	ENST00000430246.6_1_14:21731784-21731862:-|nuORF;ENST00000554969.5_1_14:21731484-21731862:-|nuORF	76.16968421966216	0.11411088698345859	2				NaN	NaN	0	NaN	3944	2914	6853
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6876	21.573	NaN	14238	30	0	2931.3	0.214	+			21904	KRSISELVA	9	70	501.80079032719647	1001.587027721193	2	501.8006591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KRSISELVA_	ENSG00000134152|ENST00000256544|KATNBL1;ENST00000540594.5_1_15:34439399-34502250:-|nuORF;ENST00000560671.5_1_15:34440831-34455877:-|nuORF	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	3957	2917	6875
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6877	21.576	NaN	41131	30	0	7780.7	0.106	+			32924	REAEETQSTL	10	89	582.2807372467634	1162.5469215603266	2	582.2806396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_REAEETQSTL_	ENSG00000125844|ENST00000377813|RRBP1;nc|ENSG00000125844|Q9P2E9-3|RRBP1	100.81924332030881	0.07526389463299563	2				NaN	NaN	0	NaN	3958	2917	6875
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6878	21.578	NaN	13149	30	0	5165.1	0.106			+	8896	EETQANINAGQ	11	69	587.7703053590586	1173.5260577849172	2	587.7705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EETQANINAGQ_	REV__ANKRD17|p.K886Sfs*4|1|0.39|ENSG00000132466|chr4:73139959-73139959|T/-|frameshift_variant;REV__ANKRD17|p.L2249Yfs*84|1|0.34|ENSG00000132466|chr4:73090884-73090884|G/-|frameshift_variant;REV__ENSG00000131503|ENST00000360839|ANKHD1;REV__ENSG00000132466|ENST00000358602|ANKRD17;REV__ENST00000490185.1_1_5:139838323-139844373:+|nuORF;REV__nc|ENSG00000131503|Q8IWZ3-2|ANKHD1;REV__nc|ENSG00000131503|Q8IWZ3-3|ANKHD1;REV__nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;REV__nc|ENSG00000131503|Q8IWZ3-5|ANKHD1;REV__nc|ENSG00000131503|Q8IWZ3-6|ANKHD1;REV__nc|ENSG00000132466|O75179-2|ANKRD17;REV__nc|ENSG00000132466|O75179-3|ANKRD17;REV__nc|ENSG00000132466|O75179-4|ANKRD17;REV__nc|ENSG00000132466|O75179-5|ANKRD17;REV__nc|ENSG00000132466|O75179-6|ANKRD17;REV__nc|ENSG00000132466|O75179-7|ANKRD17	40.05817265558897	0.5571470695993369	2				NaN	NaN	0	NaN	3959	2917	6875
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6879	21.58	NaN	21582	30	0	3876	0.106	+			24796	LIKKAGTEL	9	77	486.8079856289975	971.6014183247951	2	486.807861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LIKKAGTEL_	ENSG00000158874|ENST00000367990|APOA2	113.41158876095287	0.025516849225023126	2				NaN	NaN	0	NaN	3960	2917	6875
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6880	21.582	NaN	7375.1	30	0	744.07	0.106	+			20705	KGRCLVATKD	10	79	545.8039679542215	1089.593382975243	2	545.8040161132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KGRCLVATKD_	ENSG00000186532|ENST00000305513|SMYD4	62.107414245175825	0.3466735403679669	2				NaN	NaN	0	NaN	3961	2917	6875
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6881	21.584	NaN	2959.9	30	0	809.41	0.03				-1	 	0	47	340.1820710557646	678.3495891783292	2	340.18194580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3962	2917	6875
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6882	21.584	NaN	3160.7	30	0	298.39	0.141			+	132	AAGGGWGL	8	70	344.6742342898378	NaN	0	344.54510498046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AAGGGWGL_	REV__ENST00000324015.7_1_17:1657834-1658029:+|nuORF	16.704963439144045	1.7418937515398478	2				NaN	NaN	0	NaN	3963	2917	6875
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6897	21.618	NaN	135680	30	0	27968	0.212	+			48407	VTIKEGSQLK	10	115	551.8265032558945	1101.638453578589	2	551.826904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTIKEGSQLK_	ENSG00000100138|ENST00000401959|SNU13	144.76815839617436	0.009482796195788205	2				NaN	NaN	0	NaN	3975	2920	6896
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6898	21.621	NaN	60141	30	0	12588	0.106	+			4125	ATEHLSTLSEK	11	95	608.3149379936706	1214.615323054141	2	608.314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATEHLSTLSEK_	ENSG00000118137|ENST00000236850|APOA1	183.72194652814687	5.7103426921105755E-06	2				NaN	NaN	0	NaN	3976	2920	6896
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6899	21.623	NaN	22868	30	0	3177.4	0.106	+			883	AEHIESRTL	9	94	352.5206661736876	1054.5401691212628	3	352.52081298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEHIESRTL_	ENSG00000147872|ENST00000276914|PLIN2;PLIN2|p.V348*|1|0.15|ENSG00000147872|chr9:19116520-19116520|C/-|frameshift_variant	71.87747018426188	0.13267044672804276	2				NaN	NaN	0	NaN	3977	2920	6896
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6900	21.625	NaN	14147	30	0	1663.9	0.106	+			5165	ATTAIAIHR	9	74	477.2799201946228	952.5452874560456	2	477.27972412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATTAIAIHR_	ENST00000520964.1_1_X:134185341-134186186:-|nuORF;ENST00000522309.1_1_X:134185341-134186138:-|nuORF	98.62937762414208	0.04060045538121712	2				NaN	NaN	0	NaN	3978	2920	6896
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6901	21.627	NaN	8799.3	30	0	3511.3	0.106			+	45953	VASNEKVK	8	69	437.753197815851	873.4918426985021	2	437.7530517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VASNEKVK_	REV__ENSG00000123600|ENST00000375258|METTL8;REV__nc|ENSG00000123600|Q9H825-2|METTL8;REV__nc|ENSG00000123600|Q9H825|METTL8	84.9155231211612	0.2928622555056503	2				NaN	NaN	0	NaN	3979	2920	6896
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6902	21.629	NaN	13939	30	0	1735.8	0.034	+			3151	ASIDGCIKK	9	79	467.75482511750386	933.4950973018077	2	467.7546691894531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASIDGCIKK_	ENSG00000166750|ENST00000299977|SLFN5;nc|ENSG00000166750|Q08AF3-2|SLFN5;SLFN5|p.P698Lfs*21|1|0.46|ENSG00000166750|chr17:35265300-35265300|C/-|frameshift_variant;SLFN5|p.Q524Sfs*11|1|0.73|ENSG00000166750|chr17:35264609-35264609|C/-|frameshift_variant	115.49404669440601	0.023927554121326553	2				NaN	NaN	0	NaN	3980	2920	6896
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6903	21.629	NaN	7223.8	30	0	1530.5	0.142	+			3664	ASYMGKENLK	10	69	570.7899169921875	NaN	0	570.7899169921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASYMGKENLK_	ENSG00000054654|ENST00000555002|SYNE2;ENST00000557005.1_1_14:64469755-64489638:+|nuORF;nc|ENSG00000054654|Q8WXH0|SYNE2;SYNE2|p.A5240Qfs*5|1|0.07|ENSG00000054654|chr14:64152639-64152639|G/-|frameshift_variant;SYNE2|p.D3074Ffs*8|1|0.07|ENSG00000054654|chr14:64053132-64053133|-/TTTCTTTTTCAAATACTTG|frameshift_variant;SYNE2|p.F2563Ifs*28|1|0.34|ENSG00000054654|chr14:64051593-64051594|-/A|frameshift_variant;SYNE2|p.F2840Lfs*3|1|0.38|ENSG00000054654|chr14:64052427-64052427|T/-|frameshift_variant;SYNE2|p.F4992Lfs*13|1|0.39|ENSG00000054654|chr14:64140067-64140067|T/-|frameshift_variant;SYNE2|p.L5308Ifs*18|1|0.12|ENSG00000054654|chr14:64158750-64158751|GG/-|frameshift_variant;SYNE2|p.M1669Wfs*6|1|0.36|ENSG00000054654|chr14:64017707-64017707|A/-|frameshift_variant;SYNE2|p.N1656Mfs*19|1|0.18|ENSG00000054654|chr14:64017669-64017669|A/-|frameshift_variant;SYNE2|p.S1830Kfs*9|1|0.34|ENSG00000054654|chr14:64021985-64021986|-/A|frameshift_variant;SYNE2|p.S6651Rfs*83|1|0.29|ENSG00000054654|chr14:64220596-64220597|-/G|frameshift_variant	72.2432373244024	0.13763297510833816	2				NaN	NaN	0	NaN	3981	2920	6896
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6917	21.659	NaN	69990	30	0	12435	0.214	+			41835	SVSTKLISK	9	96	481.7975123656569	961.5804717981139	2	481.7974853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSTKLISK_	ENSG00000157741|ENST00000473989|UBN2;UBN2|p.G1191Efs*28|1|0.17|ENSG00000157741|chr7:139284473-139284473|G/-|frameshift_variant	117.5257442709337	0.022697614825424036	2				NaN	NaN	0	NaN	3992	2923	6916
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6918	21.662	NaN	18847	30	0	1922.2	0.106	+			21987	KSFDEQNVPK	10	80	596.3040796155074	1190.5936062978146	2	596.3040771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KSFDEQNVPK_	ENSG00000197321|ENST00000355867|SVIL;nc|ENSG00000197321|O95425-2|SVIL;nc|ENSG00000197321|O95425-3|SVIL;nc|ENSG00000197321|O95425-4|SVIL;SVIL|p.M1863Dfs*18|1|0.28|ENSG00000197321|chr10:29471186-29471187|-/C|frameshift_variant;SVIL|p.M1863Wfs*44|8|0.39|ENSG00000197321|chr10:29471187-29471187|C/-|frameshift_variant;SVIL|p.N2095Kfs*36|1|0.25|ENSG00000197321|chr10:29462394-29462395|-/T|frameshift_variant	159.33581866081465	0.006837894036646432	2				NaN	NaN	0	NaN	3993	2923	6916
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6919	21.664	NaN	11924	30	0	1299.3	0.106	+			25969	LSIQEHCENK	10	80	600.7876516143148	1199.5607502954294	2	600.787353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSIQEHCENK_	ENSG00000173517|ENST00000682557|PEAK1;PEAK1|p.F1319Lfs*11|1|0.37|ENSG00000173517|chr15:77133125-77133125|A/-|frameshift_variant;PEAK1|p.N1433Tfs*19|1|0.1|ENSG00000173517|chr15:77115099-77115099|T/-|frameshift_variant;PEAK1|p.Q863Kfs*186|1|0.48|ENSG00000173517|chr15:77179340-77179340|G/-|frameshift_variant;PEAK1|p.R562Sfs*34|1|0.06|ENSG00000173517|chr15:77180244-77180245|-/ATCATTCATGACGAGCCAACTTATGCTC|frameshift_variant	44.377184641726394	0.5088115166961078	2				NaN	NaN	0	NaN	3994	2923	6916
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6920	21.666	NaN	9365.3	30	0	1288.8	0.106			+	31903	QQHTLPIGL	9	74	503.78753399973186	1005.5605150662637	2	503.7845153808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QQHTLPIGL_	REV__FAM186A|p.P1269H|1|0.37|ENSG00000185958|chr12:50353026-50353026|G/T|missense_variant	66.42927471994793	0.16001998865088202	2				NaN	NaN	0	NaN	3995	2923	6916
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6921	21.668	NaN	7819.4	30	0	1165.6	0.106			+	-1	ILMLSSCPI	9	73	350.51692622327147	1048.5289492700144	3	350.5171813964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C),Oxidation (M)	_ILM(Oxidation (M))LSSC(Carbamidomethyl (C))PI_	REV__ENSG00000126822|ENST00000247226|PLEKHG3;REV__nc|ENSG00000126822|A1L390-3|PLEKHG3;REV__PLEKHG3|p.P557Qfs*19|1|0.1|ENSG00000126822|chr14:64741182-64741182|C/-|frameshift_variant	35.61828744233558	0.47037581924408073	2				NaN	NaN	0	NaN	3996	2923	6916
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6922	21.67	NaN	16877	30	0	3022.2	0.106			+	23182	KWNGKFYIA	9	78	563.806282206228	1125.598011479256	2	563.8067626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KWNGKFYIA_	REV__ENSG00000021355|ENST00000380739|SERPINB1;REV__ENST00000468511.5_1_6:2833828-2838227:-|nuORF;REV__nc|ENSG00000021355|P30740-2|SERPINB1;REV__SERPINB1|p.K203Ifs*10|1|0.36|ENSG00000021355|chr6:2835982-2835983|TT/-|frameshift_variant	38.80614096846853	0.43426287593479557	2				NaN	NaN	0	NaN	3997	2923	6916
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6923	21.672	NaN	15787	30	0	8492.6	0.036				-1	 	0	80	535.3039644644242	1068.5933759956483	2	535.3041381835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	3998	2923	6916
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6938	21.703	NaN	23659	30	0	2859.7	0.214	+			18041	IIQAKTRSL	9	82	515.3244842297855	1028.634415526371	2	515.3245239257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IIQAKTRSL_	ENSG00000197892|ENST00000524189|KIF13B;KIF13B|p.K1288Rfs*13|1|0.34|ENSG00000197892|chr8:29113530-29113530|T/-|frameshift_variant	106.68306549817024	0.032382560583716295	2				NaN	NaN	0	NaN	4010	2926	6937
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6939	21.707	NaN	51079	30	0	5325.5	0.106	+			1812	AIFQGKLEKK	10	96	581.3533564389654	1160.6921599447307	2	581.353271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AIFQGKLEKK_	ENSG00000118322|ENST00000327245|ATP10B	128.51354385984777	0.015305610523191824	2				NaN	NaN	0	NaN	4011	2926	6937
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6940	21.709	NaN	11803	30	0	1309.6	0.106			+	8182	EAASIYGNGDK	11	69	562.7645129028089	1123.5144728724176	2	562.7651977539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EAASIYGNGDK_	REV__ENSG00000143933|ENST00000272298|CALM2;REV__ENSG00000160014|ENST00000291295|CALM3;REV__ENSG00000198668|ENST00000356978|CALM1;REV__ENST00000482532.5_1_2:47387917-47389823:-|nuORF;REV__ENST00000585658.1_1_17:68237680-68237866:+|nuORF	49.536043120802724	0.4274608637932522	2				NaN	NaN	0	NaN	4012	2926	6937
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6941	21.711	NaN	10067	30	0	960.32	0.106			+	-1	LCCLACRGW	9	67	541.2389910662469	1080.4634291992936	2	541.239013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_LCC(Carbamidomethyl (C))LACRGW_	REV__ENST00000523505.1_2_7:106300358-106300571:-|nuORF	50.0245360154114	0.3026755932229825	2				NaN	NaN	0	NaN	4013	2926	6937
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6942	21.712	NaN	9526.3	30	0	1532.9	0.106	+			3362	ASNPATFQR	9	71	496.25141298885694	990.4882730445139	2	496.2511901855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASNPATFQR_	nc|ENSG00000286140|P0CG12|DERPC	70.39856735676683	0.13906523160059378	2				NaN	NaN	0	NaN	4014	2926	6937
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6943	21.714	NaN	9012.9	30	0	1713.8	0.035	+			36940	SILKHLSAK	9	92	332.8780805715163	995.612412314749	3	332.87811279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SILKHLSAK_	ENSG00000109118|ENST00000332830|PHF12;ENST00000582436.5_1_17:27237055-27251401:-|nuORF;ENST00000582655.5_1_17:27237828-27251299:-|nuORF;nc|ENSG00000109118|Q96QT6-2|PHF12;nc|ENSG00000109118|Q96QT6-3|PHF12;nc|ENSG00000109118|Q96QT6-4|PHF12;nc|ENSG00000109118|Q96QT6-5|PHF12;PHF12|p.P882Qfs*30|1|0.22|ENSG00000109118|chr17:28906891-28906891|G/-|frameshift_variant	29.170058357718403	0.5306379469863586	2				NaN	NaN	0	NaN	4015	2926	6937
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6944	21.715	NaN	9149.7	30	0	5441.4	0.138	+			1655	AGPPGGRSL	9	56	406.2248298238104	810.4351067144208	2	406.2245788574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AGPPGGRSL_	ENSG00000110717|ENST00000313468|NDUFS8	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	4016	2926	6937
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6957	21.743	NaN	52821	30	0	6893.6	0.191	+			39689	STIKFQMKK	9	81	555.8204837657471	1109.626414598294	2	555.82080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STIKFQMKK_	ENSG00000198755|ENST00000322203|RPL10A;ENST00000464112.5_1_6:35436546-35438524:+|nuORF;ENST00000472730.1_1_3:61728131-61728755:-|nuORF;ENST00000478340.2_1_6:35437033-35438524:+|nuORF	131.61620852596164	0.014413238321579053	2				NaN	NaN	0	NaN	4026	2929	6956
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6958	21.747	NaN	34674	30	0	2542.6	0.106	+			969	AEKAVTKEEF	10	101	576.3010950952794	1150.5876372573587	2	576.3007202148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEKAVTKEEF_	ENSG00000168028|ENST00000301821|RPSA;ENST00000478027.2_1_3:39450050-39453856:+|nuORF;nc|ENSG00000288920|A0A8I5KQE6|RPSA2	125.68205650279488	0.01930466848182481	2				NaN	NaN	0	NaN	4027	2929	6956
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6959	21.749	NaN	14348	30	0	7834.9	0.106	+			35378	SAPTETHSL	9	69	471.729925024818	941.445297116436	2	471.72967529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAPTETHSL_	ENSG00000184451|ENST00000332438|CCR10	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	4028	2929	6956
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6960	21.751	NaN	14879	30	0	1524.5	0.106	+			25264	LNNKEKKTM	9	86	553.3038421137235	1104.5931312942469	2	553.3052368164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LNNKEKKTM_	tr|U7SYR4|U7SYR4_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00904PE=4SV=1	56.43379154798735	0.2433427591689151	2				NaN	NaN	0	NaN	4029	2929	6956
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6961	21.752	NaN	14087	30	0	2509.8	0.106	+			45204	TVNPVAIHK	9	76	489.7894723300396	977.5643917268792	2	489.78997802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TVNPVAIHK_	ENSG00000074047|ENST00000361492|GLI2;ENST00000438299.5_1_2:121728002-121748192:+|nuORF;ENST00000452692.5_1_2:121728002-121748192:+|nuORF;GLI2|p.R1387Lfs*143|1|0.1|ENSG00000074047|chr2:120990074-120990074|G/-|frameshift_variant;nc|ENSG00000074047|P10070-1|GLI2;nc|ENSG00000074047|P10070-2|GLI2;nc|ENSG00000074047|P10070-3|GLI2;nc|ENSG00000074047|P10070-4|GLI2;nc|ENSG00000074047|P10070|GLI2	99.01295224348159	0.040209060045561164	2				NaN	NaN	0	NaN	4030	2929	6956
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6962	21.754	NaN	15299	30	0	2099.8	0.106			+	19710	KDSTPQSGAL	10	79	502.2560896525964	1002.4976263719929	2	502.2560119628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KDSTPQSGAL_	REV__ASH1L|p.H1793Ifs*7|1|0.13|ENSG00000116539|chr1:155438778-155438778|G/-|frameshift_variant;REV__ASH1L|p.K2377Nfs*5|1|0.28|ENSG00000116539|chr1:155354570-155354570|T/-|frameshift_variant;REV__ASH1L|p.N1822Tfs*2|1|0.33|ENSG00000116539|chr1:155438690-155438690|T/-|frameshift_variant;REV__ASH1L|p.S2309Ifs*11|1|0.64|ENSG00000116539|chr1:155357635-155357636|-/T|frameshift_variant;REV__ENSG00000116539|ENST00000392403|ASH1L;REV__nc|ENSG00000116539|Q9NR48|ASH1L	72.87924865735499	0.25379688738724415	2				NaN	NaN	0	NaN	4031	2929	6956
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6963	21.756	NaN	10915	30	0	1953.7	0.035				-1	ASTKKVVMK	9	71	336.5339368598552	1006.5799811797656	3	336.53411865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_ASTKKVVM(Oxidation (M))K_	CFAP47|p.F1567Vfs*4|1|0.31|ENSG00000165164|chrX:36098829-36098830|-/G|frameshift_variant;CFAP47|p.H2345Afs*15|1|0.09|ENSG00000165164|chrX:36236809-36236810|-/A|frameshift_variant;CFAP47|p.K734Nfs*6|1|0.13|ENSG00000165164|chrX:35971909-35971909|A/-|frameshift_variant;CFAP47|p.P2326Tfs*34|1|0.26|ENSG00000165164|chrX:36236751-36236752|-/A|frameshift_variant;ENSG00000165164|ENST00000378653|CFAP47;nc|ENSG00000165164|Q6ZTR5-1|CFAP47;nc|ENSG00000165164|Q6ZTR5-2|CFAP47;nc|ENSG00000165164|Q6ZTR5-6|CFAP47	24.519189625965996	0.574102787014149	2				NaN	NaN	0	NaN	4032	2929	6956
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6977	21.786	NaN	35971	30	0	5372.2	0.214	+			6278	AVSSLIRNK	9	93	494.30125325384466	986.5879535744893	2	494.3009948730469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVSSLIRNK_	ENSG00000181929|ENST00000548065|PRKAG1;ENST00000546531.5_1_12:49396684-49399341:-|nuORF;ENST00000550448.5_1_12:49398244-49398481:-|nuORF;nc|ENSG00000181929|P54619-2|PRKAG1;nc|ENSG00000181929|P54619-3|PRKAG1	185.54966270084765	0.0007389233275946833	2				NaN	NaN	0	NaN	4043	2932	6976
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6978	21.789	NaN	29868	30	0	3756	0.106	+			2580	AQFGGKILRK	10	83	559.34578660034	1116.67702026748	2	559.3460693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AQFGGKILRK_	ENSG00000070047|ENST00000264555|PHRF1;nc|ENSG00000070047|Q9P1Y6-2|PHRF1;nc|ENSG00000070047|Q9P1Y6-3|PHRF1;PHRF1|p.E1225Kfs*62|1|0.36|ENSG00000070047|chr11:609125-609125|G/-|frameshift_variant;PHRF1|p.L1393Cfs*8|1|0.38|ENSG00000070047|chr11:609628-609628|C/-|frameshift_variant;PHRF1|p.P938Qfs*23|2|0.45|ENSG00000070047|chr11:608263-608263|C/-|frameshift_variant;PHRF1|p.T1126Pfs*73|1|0.36|ENSG00000070047|chr11:608827-608827|C/-|frameshift_variant	104.0567914643314	0.06564926686336217	2				NaN	NaN	0	NaN	4044	2932	6976
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6979	21.791	NaN	10441	30	0	1190.2	0.106	+			43002	TEKLMKEKL	9	89	373.88579993295343	1118.6355703990603	3	373.88623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TEKLMKEKL_	AKAP9|p.Q3083Nfs*28|1|0.15|ENSG00000127914|chr7:92089389-92089390|-/TGAATATCAAGCAGCTATGGAATGCC|frameshift_variant;ENSG00000127914|ENST00000356239|AKAP9;nc|ENSG00000127914|Q99996-1|AKAP9;nc|ENSG00000127914|Q99996-3|AKAP9;nc|ENSG00000127914|Q99996-5|AKAP9;nc|ENSG00000127914|Q99996-6|AKAP9	40.05817265558897	0.419577045485086	2				NaN	NaN	0	NaN	4045	2932	6976
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6980	21.793	NaN	9560.7	30	0	1689.6	0.106			+	2774	ARPATPTIGP	10	73	327.52212286367956	979.5445391912388	3	327.5222473144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ARPATPTIGP_	REV__ENST00000263026.9_1_16:22217644-22236999:+|nuORF	20.94693142431847	0.7087701759873708	2				NaN	NaN	0	NaN	4046	2932	6976
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6981	21.795	NaN	5427.3	30	0	1721.6	0.106	+			23107	KVVKVTIMK	9	69	349.2313025879735	1044.6720783641206	3	349.2315673828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KVVKVTIMK_	ENSG00000139168|ENST00000266529|ZCRB1;ZCRB1|p.K141Efs*4|1|0.29|ENSG00000139168|chr12:42313900-42313901|-/T|frameshift_variant;ZCRB1|p.W185Mfs*13|2|0.39|ENSG00000139168|chr12:42313168-42313169|-/T|frameshift_variant	33.921630207806714	0.48623198279849766	2				NaN	NaN	0	NaN	4047	2932	6976
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6982	21.797	NaN	7233.4	30	0	2049.4	0.035			+	20829	KIGNQLISV	9	77	324.534199650437	970.5807695515111	3	324.5343933105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KIGNQLISV_	REV__ENSG00000158486|ENST00000698260|DNAH3;REV__nc|ENSG00000158486|Q8TD57|DNAH3	30.503639358989545	0.5181749237905803	2				NaN	NaN	0	NaN	4048	2932	6976
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6983	21.797	NaN	5782.8	30	0	631.59	0.141				-1	EMILLLPLC	9	63	354.19771602886254	1059.5713186867877	3	354.19775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_EM(Oxidation (M))ILLLPLC_	ENSG00000174156|ENST00000211122|GSTA3	34.172542307311794	0.4838870758800184	2				NaN	NaN	0	NaN	4049	2932	6976
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6998	21.831	NaN	56599	30	0	7461.8	0.214			+	36921	SIKETKRI	8	96	487.80332265223393	973.5920923712679	2	487.80316162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIKETKRI_	REV__ENST00000557868.1_1_15:48449979-48451083:-|nuORF	85.16082228582465	0.29211966821764696	2				NaN	NaN	0	NaN	4061	2935	6997
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	6999	21.834	NaN	16843	30	0	1030.5	0.106	+			40049	STNLIIHQK	9	78	527.3068473808856	NaN	0	527.3065795898438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STNLIIHQK_	ENSG00000196152|ENST00000342483|ZNF79	115.49404669440601	0.004735551190337385	2				NaN	NaN	0	NaN	4062	2935	6997
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7000	21.836	NaN	5979	30	0	2462	0.106	+			41700	SVSDLAPPRK	10	50	357.2047037882202	1068.5922819648606	3	357.2048034667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVSDLAPPRK_	ENSG00000166295|ENST00000299381|ANAPC16	40.77816245573522	0.5419747034533848	2				NaN	NaN	0	NaN	4063	2935	6997
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7001	21.838	NaN	5202	30	0	1353.6	0.106	+			8129	DYTHFTNQ	8	67	513.2217495718601	NaN	0	513.2218017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DYTHFTNQ_	ENSG00000152492|ENST00000392455|CCDC50;nc|ENSG00000152492|Q8IVM0|CCDC50	60.29395666154354	1.7418937515398478	2				NaN	NaN	0	NaN	4064	2935	6997
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7002	21.84	NaN	3587.8	30	0	309.67	0.106	+			29363	PADLSRPK	8	63	442.25347864271083	882.4924043522217	2	442.25335693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PADLSRPK_	ENSG00000047849|ENST00000683076|MAP4;MAP4|p.R919Gfs*14|1|0.44|ENSG00000047849|chr3:47870917-47870917|G/-|frameshift_variant;MAP4|p.T960Qfs*35|1|0.3|ENSG00000047849|chr3:47869309-47869309|T/-|frameshift_variant;MAP4|p.V999*|1|0.25|ENSG00000047849|chr3:47867318-47867318|T/-|frameshift_variant;nc|ENSG00000047849|P27816-2|MAP4;nc|ENSG00000047849|P27816-4|MAP4;nc|ENSG00000047849|P27816-5|MAP4;nc|ENSG00000047849|P27816-6|MAP4;nc|ENSG00000047849|P27816|MAP4	85.16082228582465	0.29211966821764696	2				NaN	NaN	0	NaN	4065	2935	6997
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7003	21.842	NaN	6585.7	30	0	821	0.035	+			12846	GEPDHNEAL	9	76	491.21753759959984	980.4205222659997	2	491.217041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GEPDHNEAL_	ENSG00000100038|ENST00000357179|TOP3B;ENST00000444502.5_1_22:22313806-22324763:-|nuORF;ENST00000457179.5_1_22:22317029-22324763:-|nuORF;nc|ENSG00000100038|O95985-2|TOP3B;nc|ENSG00000100038|O95985-3|TOP3B	56.72105179125745	0.24094814563026265	2				NaN	NaN	0	NaN	4066	2935	6997
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7004	21.842	NaN	17671	30	0	1706.9	0.143	+			38196	SQFLAPKAMKK	11	87	624.8597627458546	1247.704972558509	2	624.8605346679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SQFLAPKAMKK_	ENSG00000214530|ENST00000334805|STARD10;ENST00000535075.1_1_11:72465944-72466832:-|nuORF;ENST00000543089.1_1_11:72465944-72468974:-|nuORF	129.00119753178808	0.0028781539983950004	2				NaN	NaN	0	NaN	4067	2935	6997
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7018	21.874	NaN	14641	30	0	1567.8	0.214	+			8903	EEVAQQKSL	9	80	516.2720432566786	1030.529533580157	2	516.2721557617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EEVAQQKSL_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	172.24860141594272	0.002383092361811508	2				NaN	NaN	0	NaN	4078	2938	7017
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7019	21.877	NaN	16622	30	0	7691.4	0.106	+			45973	VATEGSREL	9	67	481.2509587943525	960.4873646555051	2	481.25091552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VATEGSREL_	ENSG00000108771|ENST00000251642|DHX58;ENST00000586522.5_1_17:40255624-40263910:-|nuORF	101.45984612302182	0.0377122763612125	2				NaN	NaN	0	NaN	4079	2938	7017
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7020	21.88	NaN	19358	30	0	4055.4	0.106	+			42348	TAHHLGLLK	9	98	330.53428526868765	988.5810264062629	3	330.5345458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TAHHLGLLK_	ENSG00000185721|ENST00000331457|DRG1;ENST00000433341.5_1_22:31795606-31819296:+|nuORF	44.116797842482775	0.37197099687881774	2				NaN	NaN	0	NaN	4080	2938	7017
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7021	21.881	NaN	51130	30	0	12669	0.106	+			44842	TTTGHLIYK	9	83	345.1937870138687	1032.5595316418062	3	345.1940002441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TTTGHLIYK_	EEF1A1|p.P263Lfs*27|1|0.36|ENSG00000156508|chr6:73518595-73518595|G/-|frameshift_variant;EEF1A2|p.T239Hfs*50|1|0.26|ENSG00000101210|chr20:63493194-63493195|-/G|frameshift_variant;EEF1A2|p.T239Rfs*40|1|0.31|ENSG00000101210|chr20:63493195-63493195|G/-|frameshift_variant;ENSG00000101210|ENST00000217182|EEF1A2;ENSG00000156508|ENST00000309268|EEF1A1;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	37.15910966729921	0.4535818937225704	2				NaN	NaN	0	NaN	4081	2938	7017
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7022	21.883	NaN	15680	30	0	6248	0.106	+			31614	QLYWSHPRK	9	76	607.8254327661674	1213.6363125991347	2	607.8252563476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QLYWSHPRK_	ENSG00000213741|ENST00000245458|RPS29;ENST00000554075.1_1_14:50052568-50053064:-|nuORF;ENST00000557367.2_1_14:50053001-50053064:-|nuORF;nc|ENSG00000213741|P62273-2|RPS29	70.8162118820467	0.13725933411854815	2				NaN	NaN	0	NaN	4082	2938	7017
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7023	21.885	NaN	9929.2	30	0	1356.1	0.035	+			3887	ATAQFKINK	9	84	510.7955913035634	1019.5766296739268	2	510.7957763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATAQFKINK_	ENSG00000143228|ENST00000271452|NUF2;NUF2|p.I401Nfs*2|1|0.3|ENSG00000143228|chr1:163349015-163349016|-/A|frameshift_variant	104.0567914643314	0.03506238181059741	2				NaN	NaN	0	NaN	4083	2938	7017
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7024	21.886	NaN	13180	30	0	1364.4	0.14	+			17423	IASVEGRKK	9	84	494.30125325384466	986.5879535744893	2	494.8049011230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IASVEGRKK_	ENSG00000196184|ENST00000423932|OR10J1;nc|ENSG00000196184|P30954|OR10J1	47.657333605630114	0.33044192980041115	2				NaN	NaN	0	NaN	4084	2938	7017
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7042	21.925	NaN	114050	30	0	22015	0.214	+			15225	GTSSVIVSR	9	70	453.2560135067938	904.4974740803876	2	453.2559814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTSSVIVSR_	ENSG00000072803|ENST00000517395|FBXW11;nc|ENSG00000072803|Q9UKB1-2|FBXW11;nc|ENSG00000072803|Q9UKB1-3|FBXW11;nc|ENSG00000072803|Q9UKB1|FBXW11	176.44474024533739	0.0016668318535579616	2				NaN	NaN	0	NaN	4099	2941	7041
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7043	21.929	NaN	34453	30	0	14977	0.106	+			17688	IEKVEHSDL	9	89	535.2802587781705	1068.545964623141	2	535.2802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IEKVEHSDL_	B2M|p.Y98Lfs*5|1|0.08|ENSG00000166710|chr15:44715648-44715648|A/-|frameshift_variant;ENSG00000166710|ENST00000648006|B2M;ENST00000559720.5_1_15:45003705-45007919:+|nuORF	120.30596017624542	0.02101454110788768	2				NaN	NaN	0	NaN	4100	2941	7041
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7044	21.931	NaN	33821	30	0	2597	0.106			+	-1	CVKSCIISTK	10	88	598.3117318777987	1194.6089108223973	2	598.31201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))VKSC(Carbamidomethyl (C))IISTK_	REV__ENST00000239906.9_1_5:137676927-137677044:+|nuORF	79.71258880314673	0.19796908725841375	2				NaN	NaN	0	NaN	4101	2941	7041
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7045	21.933	NaN	10737	30	0	4851.9	0.106	+			8573	EAYGKPVKY	9	74	527.7822670491516	1053.5499811651032	2	527.7822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EAYGKPVKY_	ENSG00000204385|ENST00000229729|SLC44A4;nc|ENSG00000204385|Q53GD3-4|SLC44A4;SLC44A4|p.F618Sfs*25|1|0.43|ENSG00000204385|chr6:31864889-31864889|A/-|frameshift_variant;SLC44A4|p.G398Afs*7|1|0.29|ENSG00000204385|chr6:31869197-31869197|G/-|frameshift_variant;SLC44A4|p.N144Kfs*55|2|0.31|ENSG00000204385|chr6:31874757-31874758|-/T|frameshift_variant;SLC44A4|p.S619Lfs*9|1|0.31|ENSG00000204385|chr6:31864888-31864889|-/A|frameshift_variant	93.19546047674547	0.05585629608842056	2				NaN	NaN	0	NaN	4102	2941	7041
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7046	21.934	NaN	9827	30	0	1102.5	0.106	+			24881	LKHLESFY	8	83	518.7773034800184	1035.5400540268367	2	518.7771606445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LKHLESFY_	ENSG00000164610|ENST00000297157|RP9;ENST00000474370.1_1_7:33138787-33148984:-|nuORF	47.91560031466742	0.6071945918984287	2				NaN	NaN	0	NaN	4103	2941	7041
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7047	21.936	NaN	5144.4	30	0	552.45	0.034			+	17536	IDQNVEKK	8	62	487.2688474731962	972.5231420131925	2	487.2690734863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IDQNVEKK_	REV__AHCTF1|p.E1870Kfs*19|1|0.27|ENSG00000153207|chr1:246850426-246850426|T/-|frameshift_variant;REV__ENSG00000153207|ENST00000648844|AHCTF1;REV__ENST00000420969.1_1_2:162357792-162360000:-|nuORF;REV__ENST00000470300.5_1_1:247004234-247028597:-|nuORF;REV__nc|ENSG00000153207|Q8WYP5-2|AHCTF1;REV__nc|ENSG00000153207|Q8WYP5-3|AHCTF1	66.42927471994793	0.4381325844043345	2				NaN	NaN	0	NaN	4104	2941	7041
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7048	21.937	NaN	29504	30	0	19182	0.141	+			31155	QGIILRNHM	9	69	541.3010230909368	1080.5874932486736	2	541.3011474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QGIILRNHM_	ZNF564|p.R61I|1|0.23|ENSG00000249709|chr19:12528313-12528313|C/A|missense_variant	37.81151784470057	0.4459294069877048	2				NaN	NaN	0	NaN	4105	2941	7041
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7063	21.965	NaN	26286	30	0	3087.5	0.214	+			3322	ASLVGQTSPK	10	84	494.27707311002365	986.5395932868473	2	494.2765197753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASLVGQTSPK_	ENSG00000055044|ENST00000264279|NOP58	131.08727773389177	0.013130408032639512	2				NaN	NaN	0	NaN	4117	2944	7062
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7064	21.968	NaN	32598	30	0	6522.5	0.106	+			30982	QERFTSMTR	9	73	578.2823783991828	1154.5502038651655	2	578.2820434570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QERFTSMTR_	ENSG00000117280|ENST00000367139|RAB29;nc|ENSG00000117280|O14966-2|RAB29	62.107414245175825	0.1960472003779324	2				NaN	NaN	0	NaN	4118	2944	7062
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7065	21.97	NaN	25020	30	0	9576.2	0.106				-1	PCLVCRGLL	9	83	344.18870636106703	1029.544289683401	3	344.1888732910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_PCLVC(Carbamidomethyl (C))RGLL_	nc|ENSG00000138892|A6PVC2-2|TTLL8;nc|ENSG00000138892|A6PVC2|TTLL8	37.15910966729921	0.4535818937225704	2				NaN	NaN	0	NaN	4119	2944	7062
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7066	21.972	NaN	15948	30	0	6366.3	0.106			+	6740	CAVAQGGRAP	10	60	465.23496100228465	928.4553690713693	2	465.2347106933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_CAVAQGGRAP_	REV__ENSG00000132671|ENST00000255008|SSTR4	53.351449002276354	0.42630798468005626	2				NaN	NaN	0	NaN	4120	2944	7062
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7067	21.974	NaN	9528.2	30	0	823.79	0.106	+			6200	AVQRTLLEK	9	73	529.321820802703	1056.6290886722059	2	529.3217163085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVQRTLLEK_	ENSG00000002586|ENST00000381192|CD99;ENST00000381177.6_1_X:2656215-2658842:+|nuORF;nc|ENSG00000292348|P14209-3|CD99	109.47833844074708	0.029530294723441826	2				NaN	NaN	0	NaN	4121	2944	7062
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7068	21.975	NaN	14313	30	0	2940.5	0.106			+	37526	SLLQDGERL	9	75	515.779086860306	1029.543620787412	2	515.7796630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLLQDGERL_	REV__AHNAK2|p.D1643Tfs*9|1|0.12|ENSG00000185567|chr14:104950524-104950524|C/-|frameshift_variant;REV__AHNAK2|p.D4448Gfs*6|1|0.2|ENSG00000185567|chr14:104942108-104942109|-/C|frameshift_variant;REV__AHNAK2|p.D983Tfs*9|1|0.16|ENSG00000185567|chr14:104952504-104952504|C/-|frameshift_variant;REV__AHNAK2|p.E5149Gfs*8|1|0.32|ENSG00000185567|chr14:104940005-104940006|-/C|frameshift_variant;REV__AHNAK2|p.E5446Gfs*7|1|0.32|ENSG00000185567|chr14:104939114-104939115|-/C|frameshift_variant;REV__AHNAK2|p.F346Sfs*42|1|0.12|ENSG00000185567|chr14:104954416-104954416|C/-|frameshift_variant;REV__AHNAK2|p.L4206Cfs*19|1|0.12|ENSG00000185567|chr14:104942835-104942835|G/-|frameshift_variant;REV__AHNAK2|p.P2536Lfs*14|1|0.11|ENSG00000185567|chr14:104947844-104947844|G/-|frameshift_variant;REV__ENSG00000185567|ENST00000333244|AHNAK2;REV__ENST00000555122.1_1_14:105421221-105423995:-|nuORF;REV__nc|ENSG00000185567|Q8IVF2-3|AHNAK2	96.0336014099291	0.047854655524928534	2				NaN	NaN	0	NaN	4122	2944	7062
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7069	21.977	NaN	7997.6	30	0	2484	0.033			+	30988	QERLVSGV	8	63	444.2507391699168	886.4869254066336	2	444.25054931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QERLVSGV_	REV__ENST00000600927.1_3_19:57904156-57904294:+|nuORF	74.25504064058377	0.37144338840759816	2				NaN	NaN	0	NaN	4123	2944	7062
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7070	21.978	NaN	8184.9	30	0	3040.6	0.141			+	11401	FLPNFFTLP	9	64	548.2958886379578	1094.5772243427155	2	548.2958374023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_FLPNFFTLP_	REV__ENSG00000119720|ENST00000354366|NRDE2;REV__NRDE2|p.N752Tfs*5|1|0.34|ENSG00000119720|chr14:90289120-90289120|T/-|frameshift_variant	51.33545320467046	0.2872990594074956	2				NaN	NaN	0	NaN	4124	2944	7062
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7076	21.994	NaN	26254	30	0	3310.1	0.214	+			32071	QSASPLLHGEK	11	104	583.8117563602292	1165.6089597872583	2	583.8121948242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QSASPLLHGEK_	ENST00000550178.1_1_12:120933958-120934105:+|nuORF	100.81924332030881	0.058993442163212936	2				NaN	NaN	0	NaN	4127	2947	7075
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7077	21.998	NaN	14496	30	0	1658.9	0.106	+			36439	SEVDRSNSL	9	88	503.7435798637375	NaN	0	503.7434997558594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEVDRSNSL_	ENSG00000189184|ENST00000344876|PCDH18;nc|ENSG00000189184|Q9HCL0-2|PCDH18;PCDH18|p.R1037H|1|0.23|ENSG00000189184|chr4:137521327-137521327|C/T|missense_variant	91.26522074875469	0.03904588892501484	2				NaN	NaN	0	NaN	4128	2947	7075
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7078	22	NaN	7674.4	30	0	1590.4	0.106			+	12104	GADNLQVI	8	62	415.22451253343036	828.4344721336607	2	415.22418212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GADNLQVI_	REV__ENSG00000119636|ENST00000394009|BBOF1;REV__ENST00000477986.2_1_14:74512798-74514942:+|nuORF	83.28718786952967	0.2977916691876266	2				NaN	NaN	0	NaN	4129	2947	7075
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7079	22.002	NaN	59064	30	0	33857	0.106				-1	 	0	86	329.1938567972729	984.5597409920186	3	329.1939697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4130	2947	7075
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7080	22.003	NaN	7215.8	30	0	636.69	0.106	+			7119	DAAKNQVAM	9	72	474.234100886826	946.453648840452	2	474.23394775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DAAKNQVAM_	ENSG00000109971|ENST00000534624|HSPA8;ENSG00000126803|ENST00000247207|HSPA2;ENSG00000204390|ENST00000375654|HSPA1L;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000531063.1_1_11:122931759-122932032:-|nuORF;ENST00000532167.5_1_11:122930938-122932032:-|nuORF;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;ENST00000533238.5_1_11:122929516-122932032:-|nuORF;HSPA2|p.G138Afs*8|3|0.33|ENSG00000126803|chr14:64541257-64541257|G/-|frameshift_variant;HSPA8|p.K569Dfs*6|1|0.3|ENSG00000109971|chr11:123058302-123058303|TC/-|frameshift_variant;nc|ENSG00000109971|P11142-2|HSPA8	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	4131	2947	7075
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7081	22.005	NaN	15455	30	0	1401.1	0.106			+	17684	IEKRFHQF	8	87	552.8021712147265	NaN	0	552.800048828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IEKRFHQF_	REV__ENST00000263791.9_1_15:40300307-40301836:+|nuORF	76.7741389293348	1.7418937515398478	2				NaN	NaN	0	NaN	4132	2947	7075
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7082	22.007	NaN	8352.8	30	0	821.35	0.038	+			39517	STFQPANKLNK	11	79	624.3400681637539	1246.6655833943078	2	624.3410034179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STFQPANKLNK_	ENSG00000131503|ENST00000360839|ANKHD1;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	89.02883481214508	0.10275031849113642	2				NaN	NaN	0	NaN	4133	2947	7075
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7097	22.038	NaN	24691	30	0	3336.6	0.214	+			41827	SVSTHLITK	9	85	493.2875076280446	984.5604623228892	2	493.2872009277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSTHLITK_	ENSG00000177873|ENST00000432264|ZNF619;ENST00000494154.6_1_3:40523704-40529729:+|nuORF;nc|ENSG00000177873|Q8N2I2-2|ZNF619;nc|ENSG00000177873|Q8N2I2-4|ZNF619;nc|ENSG00000177873|Q8N2I2|ZNF619	138.06239232086	0.011389075116295402	2				NaN	NaN	0	NaN	4145	2950	7096
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7098	22.042	NaN	35477	30	0	4022.9	0.106	+			4405	ATIDGSVNPK	10	98	501.26681657940736	1000.5190802256147	2	501.26654052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATIDGSVNPK_	ENSG00000116830|ENST00000369466|TTF2;ENST00000463696.1_1_1:117637951-117640053:+|nuORF;ENST00000492682.5_1_1:117635418-117640830:+|nuORF;TTF2|p.K1134Efs*22|1|0.25|ENSG00000116830|chr1:117101426-117101427|-/A|frameshift_variant	123.20810148215591	0.02279876478776198	2				NaN	NaN	0	NaN	4146	2950	7096
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7099	22.044	NaN	19446	30	0	10384	0.106				-1	 	0	77	535.3039644644242	1068.5933759956483	2	535.3040161132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4147	2950	7096
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7100	22.046	NaN	12900	30	0	1198.7	0.106	+			36355	SESTNQRVL	9	76	517.2674270861573	1032.5203012391146	2	517.2673950195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SESTNQRVL_	ENSG00000158604|ENST00000457408|TMED4;ENSG00000184840|ENST00000332598|TMED9;ENST00000507723.1_1_5:177021070-177022414:+|nuORF;ENST00000513799.5_1_5:177019550-177022414:+|nuORF;nc|ENSG00000158604|Q7Z7H5-2|TMED4	122.1759843771914	0.019882474861609503	2				NaN	NaN	0	NaN	4148	2950	7096
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7101	22.048	NaN	13021	30	0	1770.2	0.106	+			40892	SVFLGTHSK	9	72	488.26649347697713	974.5184340207543	2	488.2661437988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVFLGTHSK_	ENSG00000119685|ENST00000298832|TTLL5;nc|ENSG00000119685|Q6EMB2-2|TTLL5	90.60085204095205	0.06317133949006545	2				NaN	NaN	0	NaN	4149	2950	7096
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7102	22.05	NaN	10919	30	0	3338	0.037	+			11112	FFLSQLMLAP	10	70	591.814688447142	1181.6148239610839	2	591.8152465820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_FFLSQLM(Oxidation (M))LAP_	ENSG00000158435|ENST00000289382|CNOT11	40.77816245573522	0.5419747034533848	2				NaN	NaN	0	NaN	4150	2950	7096
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7103	22.05	NaN	3812.2	30	0	424.88	0.139				-1	 	0	56	364.73813970944076	727.4617264856815	2	364.7381591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4151	2950	7096
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7118	22.082	NaN	29091	30	0	3419.6	0.214	+			15370	GTVYFKEGK	9	92	514.7742809743129	1027.5340090154257	2	514.7742309570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTVYFKEGK_	ENSG00000004478|ENST00000001008|FKBP4	143.37361013837676	0.008897369944672323	2				NaN	NaN	0	NaN	4163	2953	7117
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7119	22.086	NaN	13582	30	0	6082.1	0.106	+			15371	GTVYFKEGK	9	67	343.51843372151484	1027.5334717647445	3	343.51861572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTVYFKEGK_	ENSG00000004478|ENST00000001008|FKBP4	40.77816245573522	0.41113185337114944	2				NaN	NaN	0	NaN	4164	2953	7117
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7120	22.088	NaN	10360	30	0	1439.2	0.106	+			12924	GESKFQQKL	9	87	532.7903195401456	1063.566086147091	2	532.79052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GESKFQQKL_	ENSG00000139687|ENST00000267163|RB1	87.69643885390035	0.07135982304947239	2				NaN	NaN	0	NaN	4165	2953	7117
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7121	22.09	NaN	10858	30	0	1773.6	0.106			+	43573	TIDKDNGNKI	10	75	559.2958872977026	1116.5772216622051	2	559.29638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TIDKDNGNKI_	REV__ENSG00000119844|ENST00000409933|AFTPH;REV__ENST00000498706.5_1_2:64778608-64806757:+|nuORF;REV__nc|ENSG00000119844|Q6ULP2-6|AFTPH;REV__nc|ENSG00000119844|Q6ULP2-7|AFTPH;REV__nc|ENSG00000119844|Q6ULP2-8|AFTPH;REV__nc|ENSG00000119844|Q6ULP2-9|AFTPH	51.19269402634007	0.44601001148513897	2				NaN	NaN	0	NaN	4166	2953	7117
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7122	22.091	NaN	4913.9	30	0	551.78	0.106	+			13955	GSAITGPVAK	10	60	450.76106330280584	899.5075736724117	2	450.76080322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GSAITGPVAK_	ENSG00000125691|ENST00000479035|RPL23;ENST00000584583.1_1_17:37006387-37006753:-|nuORF	58.2462437865262	0.38179041844353556	2				NaN	NaN	0	NaN	4167	2953	7117
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7123	22.093	NaN	7452.7	30	0	933.93	0.041			+	9795	ENYKYSQERSH	11	68	720.8294363089242	1439.6443196846483	2	720.8271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ENYKYSQERSH_	REV__ZNF569|p.C244Y|1|0.11|ENSG00000196437|chr19:37413927-37413927|C/T|missense_variant	21.0322348234405	0.7691802065814517	2				NaN	NaN	0	NaN	4168	2953	7117
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7124	22.094	NaN	7442.7	30	0	1292.2	0.145			+	-1	YHCRAQKDL	9	63	595.791443786676	1189.568334640152	2	595.7915649414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_YHC(Carbamidomethyl (C))RAQKDL_	REV__ENSG00000099330|ENST00000215061|OCEL1;REV__ENST00000594283.5_1_19:17337742-17339731:+|nuORF	26.69291269510374	0.5537881896960711	2				NaN	NaN	0	NaN	4169	2953	7117
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7139	22.127	NaN	649120	30	0	209840	0.134				-1	 	0	77	384.77200986210534	767.5294667910107	2	384.7720642089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4181	2956	7138
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7140	22.129	NaN	65013	30	0	11212	0.106	+			5075	ATSLGHFTK	9	98	481.25848896573854	960.5024249982771	2	481.2585754394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATSLGHFTK_	ENSG00000060237|ENST00000315939|WNK1;ENST00000540885.1_1_12:1016996-1017955:+|nuORF;nc|ENSG00000060237|Q9H4A3-2|WNK1;nc|ENSG00000060237|Q9H4A3-4|WNK1;nc|ENSG00000060237|Q9H4A3-5|WNK1;nc|ENSG00000060237|Q9H4A3-6|WNK1;nc|ENSG00000060237|Q9H4A3-7|WNK1	104.01359247289065	0.03510646158778409	2				NaN	NaN	0	NaN	4182	2956	7138
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7141	22.131	NaN	49071	30	0	6287.6	0.106	+			4676	ATLSEARLK	9	97	494.7929868237604	987.5714207143208	2	494.792724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATLSEARLK_	ENSG00000153815|ENST00000537098|CMIP;nc|ENSG00000153815|Q8IY22-2|CMIP;nc|ENSG00000153815|Q8IY22-3|CMIP	169.6522961985778	0.0028262690464207238	2				NaN	NaN	0	NaN	4183	2956	7138
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7142	22.133	NaN	134170	30	0	70207	0.106				-1	 	0	99	364.897168720449	1091.669676761547	3	364.8973083496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4184	2956	7138
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7143	22.135	NaN	43629	30	0	4023.2	0.106	+			5202	ATTSLSLRR	9	111	502.79596839553517	1003.5773838578704	2	502.79608154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATTSLSLRR_	ENSG00000204351|ENST00000375394|SKIC2;ENST00000465703.5_1_6:31926942-31928873:+|nuORF;ENST00000488648.5_1_6:31926942-31929152:+|nuORF;SKIV2L|p.E1164Gfs*8|1|0.22|ENSG00000204351|chr6:31969365-31969366|-/G|frameshift_variant;SKIV2L|p.E816Rfs*3|1|0.37|ENSG00000204351|chr6:31967104-31967104|G/-|frameshift_variant	68.84614121027924	0.14577793175421136	2				NaN	NaN	0	NaN	4185	2956	7138
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7144	22.136	NaN	36171	30	0	4339	0.106	+			46903	VISRAISVK	9	91	486.81361058921294	971.6126682452259	2	486.81353759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VISRAISVK_	ENST00000530759.1_1_11:76155338-76155506:-|nuORF	91.26522074875469	0.06129826844580791	2				NaN	NaN	0	NaN	4186	2956	7138
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7145	22.138	NaN	63470	30	0	25054	0.035			+	46864	VIKSREIK	8	94	324.8778592578148	NaN	0	324.87811279296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VIKSREIK_	REV__ENSG00000156194|ENST00000286719|PPEF2;REV__nc|ENSG00000156194|O14830-2|PPEF2;REV__PPEF2|p.T315I|1|0.52|ENSG00000156194|chr4:75876663-75876663|G/A|missense_variant	57.81127852772723	1.7418937515398478	2				NaN	NaN	0	NaN	4187	2956	7138
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7163	22.175	NaN	111440	30	0	11361	0.147	+			38594	SSGFVAIKK	9	91	468.77933130342853	935.5441096736571	2	468.7790222167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSGFVAIKK_	ENSG00000198478|ENST00000369838|SH3BGRL2;SH3BGRL2|p.P55Rfs*41|2|0.28|ENSG00000198478|chr6:79673727-79673727|C/-|frameshift_variant	127.46168284122857	0.016682644177004526	2				NaN	NaN	0	NaN	4202	2959	7162
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7164	22.177	NaN	36674	30	0	4330	0.106	+			1773	AICQWERNK	9	96	602.7984161059419	1203.5822792786837	2	602.7984008789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_AIC(Carbamidomethyl (C))QWERNK_	ENSG00000140526|ENST00000352732|ABHD2	171.53180478179638	0.0025054460641941692	2				NaN	NaN	0	NaN	4203	2959	7162
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7165	22.179	NaN	36209	30	0	3836.5	0.106	+			37907	SPCIFHISF	9	94	525.7553095555072	1049.4960661778143	2	525.7554321289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SPCIFHISF_	ENST00000547065.1_1_12:48238531-48272768:-|nuORF	60.97194046774394	0.20551255781574032	2				NaN	NaN	0	NaN	4204	2959	7162
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7166	22.181	NaN	31050	30	0	13760	0.106	+			37922	SPEDIKKAY	9	75	350.853527019636	1049.538751659108	3	350.85369873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SPEDIKKAY_	DNAJB6|p.R24W|1|0.27|ENSG00000105993|chr7:157363165-157363165|C/T|missense_variant;DNAJB7|p.A14V|1|0.08|ENSG00000172404|chr22:40861954-40861954|G/A|missense_variant;DNAJB8|p.R24H|1|0.38|ENSG00000179407|chr3:128463175-128463175|C/T|missense_variant;ENSG00000105993|ENST00000262177|DNAJB6;ENSG00000172404|ENST00000307221|DNAJB7;ENSG00000179407|ENST00000319153|DNAJB8;ENST00000488001.5_1_7:157151266-157161444:+|nuORF;ENST00000526843.2_1_11:127810983-127811547:-|nuORF;nc|ENSG00000105993|O75190-2|DNAJB6;nc|ENSG00000105993|O75190-3|DNAJB6	52.936696900407355	0.27249468807391813	2				NaN	NaN	0	NaN	4205	2959	7162
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7167	22.183	NaN	10263	30	0	3294	0.106			+	-1	LSSLVIVFMF	10	76	391.21923293861437	1170.635869416043	3	391.21917724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_LSSLVIVFM(Oxidation (M))F_	REV__ENSG00000157637|ENST00000374759|SLC38A10;REV__ENST00000546352.1_1_17:79244758-79256003:-|nuORF;REV__nc|ENSG00000157637|Q9HBR0-2|SLC38A10;REV__nc|ENSG00000157637|Q9HBR0-3|SLC38A10	28.081489160057373	0.6505064946289502	2				NaN	NaN	0	NaN	4206	2959	7162
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7168	22.185	NaN	12324	30	0	1127.5	0.106	+			912	AEIEGLKGQRA	11	87	586.324758655018	1170.6349643768358	2	586.3253784179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEIEGLKGQRA_	CON__H-INV:HIT000292931;CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;ENST00000547031.5_1_12:53292389-53294972:-|nuORF;ENST00000562317.1_1_16:78082520-78083381:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	112.2953585152457	0.03526820493220478	2				NaN	NaN	0	NaN	4207	2959	7162
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7169	22.186	NaN	7282.2	30	0	738.89	0.035	+			40662	SVASAVKLNK	10	79	508.80832625310245	1015.6020995730049	2	508.8081970214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVASAVKLNK_	ENSG00000116478|ENST00000373548|HDAC1;ENST00000463172.5_1_1:32757770-32792715:+|nuORF;ENST00000481281.5_1_1:32757770-32793222:+|nuORF	78.26377905018397	0.20980573808910843	2				NaN	NaN	0	NaN	4208	2959	7162
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7182	22.214	NaN	36787	30	0	9359.8	0.215			+	28628	NKVVTIGVSG	10	82	325.1940616530452	972.5603555593357	3	325.1940612792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NKVVTIGVSG_	REV__tr|U7T3J3|U7T3J3_FUSNUAutotransporterdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00684PE=4SV=1	47.657333605630114	0.47858658696240314	2				NaN	NaN	0	NaN	4218	2962	7181
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7183	22.218	NaN	29250	30	0	2502	0.106			+	9644	ELRVKESI	8	96	487.2874845818739	972.5604162305478	2	487.28729248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ELRVKESI_	REV__ENSG00000144596|ENST00000621039|GRIP2;REV__GRIP2|p.L561Sfs*95|1|0.1|ENSG00000144596|chr3:14514395-14514395|G/-|frameshift_variant;REV__nc|ENSG00000144596|Q9C0E4-2|GRIP2	98.62937762414208	0.25143494708580966	2				NaN	NaN	0	NaN	4219	2962	7181
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7184	22.22	NaN	30020	30	0	2393.2	0.106	+			37923	SPEDIKKAY	9	89	525.7775043593671	1049.540455785534	2	525.777099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SPEDIKKAY_	DNAJB6|p.R24W|1|0.27|ENSG00000105993|chr7:157363165-157363165|C/T|missense_variant;DNAJB7|p.A14V|1|0.08|ENSG00000172404|chr22:40861954-40861954|G/A|missense_variant;DNAJB8|p.R24H|1|0.38|ENSG00000179407|chr3:128463175-128463175|C/T|missense_variant;ENSG00000105993|ENST00000262177|DNAJB6;ENSG00000172404|ENST00000307221|DNAJB7;ENSG00000179407|ENST00000319153|DNAJB8;ENST00000488001.5_1_7:157151266-157161444:+|nuORF;ENST00000526843.2_1_11:127810983-127811547:-|nuORF;nc|ENSG00000105993|O75190-2|DNAJB6;nc|ENSG00000105993|O75190-3|DNAJB6	169.6522961985778	0.0028262690464207238	2				NaN	NaN	0	NaN	4220	2962	7181
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7185	22.222	NaN	21274	30	0	3342.2	0.106	+			28225	NAVNLSWKH	9	77	534.7824355018747	1067.5503180705493	2	535.785400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NAVNLSWKH_	nc|ENSG00000178562|P10747-4|CD28	70.8162118820467	0.13725933411854815	2				NaN	NaN	0	NaN	4221	2962	7181
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7186	22.224	NaN	20627	30	0	2602.1	0.106				-1	ERRMQLVK	8	94	373.2096122107544	1116.6070072324633	3	373.5417175292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))ERRM(Oxidation (M))QLVK_	ENSG00000188895|ENST00000398532|MSL1;ENST00000578826.1_1_17:38279393-38282678:+|nuORF;MSL1|p.F555Sfs*10|1|0.31|ENSG00000188895|chr17:40133637-40133637|T/-|frameshift_variant;MSL1|p.Q528Kfs*43|1|0.03|ENSG00000188895|chr17:40133556-40133557|-/AAAAACAAACCAAACAA|frameshift_variant;nc|ENSG00000188895|Q68DK7-2|MSL1;nc|ENSG00000188895|Q68DK7-3|MSL1	35.61828744233558	0.6843154725607303	2				NaN	NaN	0	NaN	4222	2962	7181
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7187	22.225	NaN	12794	30	0	2616.8	0.106			+	24733	LHRAARNLG	9	74	336.5339368598552	1006.5799811797656	3	336.53411865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LHRAARNLG_	REV__ENSG00000096996|ENST00000593993|IL12RB1;REV__nc|ENSG00000096996|P42701-2|IL12RB1	25.450171626174864	0.5654022654467333	2				NaN	NaN	0	NaN	4223	2962	7181
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7188	22.227	NaN	8766.2	30	0	1039.1	0.035	+			3632	ASVYQPLKK	9	77	517.3059620905062	NaN	0	517.3057861328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASVYQPLKK_	ENSG00000204178|ENST00000374343|MACO1;nc|ENSG00000204178|Q8N5G2-2|MACO1;nc|ENSG00000204178|Q8N5G2-3|MACO1	96.0336014099291	0.029433397039169355	2				NaN	NaN	0	NaN	4224	2962	7181
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7203	22.259	NaN	12959	30	0	1083.3	0.214	+			26771	LVQKAILQK	9	79	520.8449623578467	1039.6753717824934	2	520.8451538085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LVQKAILQK_	ENSG00000116731|ENST00000311066|PRDM2;nc|ENSG00000116731|Q13029-2|PRDM2;nc|ENSG00000116731|Q13029-3|PRDM2;nc|ENSG00000116731|Q13029-5|PRDM2;PRDM2|p.P1648Qfs*14|1|0.24|ENSG00000116731|chr1:13782731-13782731|G/-|frameshift_variant	108.08749611321984	0.03094949498378333	2				NaN	NaN	0	NaN	4236	2965	7202
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7204	22.262	NaN	8828.4	30	0	1216.8	0.106	+			2717	AQSYVLVKK	9	78	518.3128304271632	1034.6111079211264	2	518.3134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AQSYVLVKK_	ENSG00000167881|ENST00000307877|SRP68;ENST00000586859.1_1_17:74039843-74041464:-|nuORF;nc|ENSG00000167881|Q9UHB9-2|SRP68;nc|ENSG00000167881|Q9UHB9-3|SRP68;nc|ENSG00000167881|Q9UHB9-4|SRP68	101.25262130126117	0.03792372629710479	2				NaN	NaN	0	NaN	4237	2965	7202
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7205	22.264	NaN	11821	30	0	1563.8	0.106	+			18574	ISPHGNAL	8	78	404.71906097568194	NaN	0	404.71917724609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ISPHGNAL_	ENSG00000166855|ENST00000300107|CLPX;ENST00000558103.1_1_15:65450907-65451087:-|nuORF;ENST00000558958.1_1_15:65449172-65477491:-|nuORF	108.08749611321984	1.7418937515398478	2				NaN	NaN	0	NaN	4238	2965	7202
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7206	22.266	NaN	9864.4	30	0	938.45	0.106	+			35866	SEDPNQAKL	9	83	501.24800668201044	1000.4814604308209	2	501.248291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SEDPNQAKL_	ENSG00000141279|ENST00000322157|NPEPPS;ENST00000530514.5_1_17:45668242-45699283:+|nuORF;ENST00000534807.1_1_17:45673771-45679230:+|nuORF;nc|ENSG00000141279|P55786-2|NPEPPS	72.87924865735499	0.12833875048249987	2				NaN	NaN	0	NaN	4239	2965	7202
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7207	22.268	NaN	7048.3	30	0	538.76	0.106	+			258	AAMLMPHQK	9	61	513.7647411864937	1025.5149294397872	2	513.7649536132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AAMLMPHQK_	ENSG00000138663|ENST00000264389|COPS4;nc|ENSG00000138663|Q9BT78-2|COPS4	85.35947970620816	0.07794846947388434	2				NaN	NaN	0	NaN	4240	2965	7202
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7208	22.27	NaN	15180	30	0	2123.8	0.036			+	36781	SIAQHFSVQ	9	87	339.5100728953953	NaN	0	339.5102233886719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SIAQHFSVQ_	REV__nc|ENSG00000215695|Q92681|RSC1A1	54.776311868738084	0.17377682019723872	2				NaN	NaN	0	NaN	4241	2965	7202
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7209	22.27	NaN	5637.4	30	0	803.02	0.143	+			5920	AVLEKQDISDK	11	82	623.3373997793457	1244.6602466254913	2	623.3379516601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AVLEKQDISDK_	ENSG00000135932|ENST00000258418|CAB39	100.08592035916087	0.060509483168783906	2				NaN	NaN	0	NaN	4242	2965	7202
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7222	22.3	NaN	30031	30	0	10615	0.214	+			41783	SVSPVVHVR	9	85	490.28777649374985	978.5610000542997	2	490.2872314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSPVVHVR_	ENSG00000143889|ENST00000449105|HNRNPLL;nc|ENSG00000143889|Q8WVV9-2|HNRNPLL;nc|ENSG00000143889|Q8WVV9-3|HNRNPLL;nc|ENSG00000143889|Q8WVV9-4|HNRNPLL;nc|ENSG00000143889|Q8WVV9-5|HNRNPLL	85.16082228582465	0.07850854922700509	2				NaN	NaN	0	NaN	4252	2968	7221
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7223	22.304	NaN	57431	30	0	10010	0.106	+			31096	QFQHLVAFK	9	82	559.3113397929748	1116.6081266527494	2	559.3114013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QFQHLVAFK_	ENST00000352732.9_1_15:89738886-89738976:+|nuORF	76.7741389293348	0.11149722112137898	2				NaN	NaN	0	NaN	4253	2968	7221
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7224	22.306	NaN	22927	30	0	4512.5	0.106	+			12939	GESSGKNVTL	10	83	496.2563121542077	990.4980713752154	2	496.2557067871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GESSGKNVTL_	ENSG00000174444|ENST00000307961|RPL4;ENST00000561554.5_1_15:66795666-66797161:-|nuORF;ENST00000561775.5_1_15:66795189-66797161:-|nuORF;ENST00000564439.5_1_15:66793756-66797161:-|nuORF;ENST00000566039.5_1_15:66793707-66797161:-|nuORF;ENST00000566622.5_1_15:66794044-66797161:-|nuORF;ENST00000566624.5_1_15:66794944-66797161:-|nuORF;ENST00000567229.5_1_15:66795359-66797161:-|nuORF	108.31271852315183	0.05301033373712667	2				NaN	NaN	0	NaN	4254	2968	7221
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7225	22.308	NaN	26347	30	0	4692.8	0.106	+			45099	TVILPIKKK	9	83	520.3655365286802	1038.7165201241603	2	520.3650512695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TVILPIKKK_	ENSG00000138138|ENST00000680024|ATAD1;nc|ENSG00000138138|Q8NBU5-2|ATAD1	106.68306549817024	0.032382560583716295	2				NaN	NaN	0	NaN	4255	2968	7221
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7226	22.31	NaN	35080	30	0	16632	0.106	+			45100	TVILPIKKK	9	87	347.2458813881245	1038.7158147645735	3	347.24603271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TVILPIKKK_	ENSG00000138138|ENST00000680024|ATAD1;nc|ENSG00000138138|Q8NBU5-2|ATAD1	44.377184641726394	0.36891676396732553	2				NaN	NaN	0	NaN	4256	2968	7221
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7227	22.311	NaN	4523.6	30	0	512.97	0.106	+			11785	FSNSHNAL	8	60	445.21161055677425	888.4086681803485	2	445.21142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FSNSHNAL_	ENSG00000166165|ENST00000348956|CKB;ENST00000555770.1_1_14:103988551-103989144:-|nuORF	71.87747018426188	0.391254423828572	2				NaN	NaN	0	NaN	4257	2968	7221
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7228	22.313	NaN	17267	30	0	4034.8	0.037	+			19274	KAFNQGKIFK	10	85	590.8454644062839	1179.6763758793677	2	590.8455810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KAFNQGKIFK_	ENSG00000254772|ENST00000329251|EEF1G;ENST00000526409.5_1_11:62327153-62342310:-|nuORF;nc|ENSG00000254772|P26641-2|EEF1G;NCEH1-EEF1G|1|fusion	143.8867514904718	0.009717797899383705	2				NaN	NaN	0	NaN	4258	2968	7221
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7246	22.349	NaN	203210	30	0	52613	0.147	+			12339	GDKGRLCLQK	10	83	373.2096122107544	1116.6070072324633	3	373.2098693847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GDKGRLCLQK_	AluSc_dup13832|chr7:33006087-33006413:-|3.3176111198493|0.4159080058002372|3.0|482.0|7|2|sense	53.08895987439943	0.42869529153390606	2				NaN	NaN	0	NaN	4273	2971	7245
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7247	22.352	NaN	76433	30	0	18224	0.106	+			15466	GVADKILKK	9	94	486.3160451709383	970.6175374086766	2	486.31561279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GVADKILKK_	ENSG00000123609|ENST00000243346|NMI	136.98908636845044	0.011892605960677736	2				NaN	NaN	0	NaN	4274	2971	7245
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7248	22.354	NaN	21065	30	0	13240	0.106	+			51503	YVPPKSREL	9	71	544.8083213964547	1087.6020898597094	2	544.8087768554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YVPPKSREL_	ENSG00000102879|ENST00000219150|CORO1A;ENST00000567034.5_1_16:30199450-30200005:+|nuORF	58.22992032128504	0.22837015374068087	2				NaN	NaN	0	NaN	4275	2971	7245
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7249	22.356	NaN	18421	30	0	4117.7	0.106				-1	 	0	57	420.30772640629016	838.6008998793803	2	420.3072509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4276	2971	7245
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7250	22.358	NaN	11497	30	0	1199.7	0.106	+			6158	AVQGCVLQK	9	68	501.77370466904455	NaN	0	501.7736511230469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_AVQGC(Carbamidomethyl (C))VLQK_	ENSG00000106125|ENST00000265299|MINDY4	96.19043198914106	0.029117245125711146	2				NaN	NaN	0	NaN	4277	2971	7245
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7251	22.359	NaN	4183.4	30	0	1148	0.106				-1	 	0	62	324.2168875716479	323.2096111050479	1	324.2169189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4278	2971	7245
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7252	22.361	NaN	6343.8	30	0	678.69	0.032			+	24582	LGPKGGKH	8	62	397.23769145941816	792.4608299856363	2	397.2373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LGPKGGKH_	REV__AHNAK|p.I657Nfs*25|1|0.36|ENSG00000124942|chr11:62532447-62532448|-/T|frameshift_variant;REV__AHNAK|p.K2311Rfs*11|1|0.33|ENSG00000124942|chr11:62527487-62527487|G/-|frameshift_variant;REV__AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;REV__AHNAK|p.L2124Ifs*37|1|0.04|ENSG00000124942|chr11:62528048-62528049|-/ATGCCTGATA|frameshift_variant;REV__AHNAK|p.S1888Qfs*8|1|0.11|ENSG00000124942|chr11:62528755-62528756|-/G|frameshift_variant;REV__ENSG00000124942|ENST00000378024|AHNAK	20.481830146152948	0.8005983782650069	2				NaN	NaN	0	NaN	4279	2971	7245
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7267	22.392	NaN	46528	30	0	8135.9	0.195	+			35229	SALEEYTKK	9	98	534.7824355018747	1067.5503180705493	2	534.7824096679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SALEEYTKK_	ENSG00000118137|ENST00000236850|APOA1	138.06239232086	0.011389075116295402	2				NaN	NaN	0	NaN	4291	2974	7266
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7268	22.395	NaN	111720	30	0	25086	0.106	+			14362	GTADVHFER	9	107	516.2489884891042	1030.4834240450084	2	516.2489013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTADVHFER_	ENSG00000183684|ENST00000505490|ALYREF;ENST00000512673.1_1_17:79846815-79848630:-|nuORF;nc|ENSG00000183684|Q86V81|ALYREF	154.0112374973812	0.005934173778894772	2				NaN	NaN	0	NaN	4292	2974	7266
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7269	22.397	NaN	86287	30	0	36701	0.106	+			14363	GTADVHFER	9	103	344.50143374953836	1030.482471848815	3	344.50164794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTADVHFER_	ENSG00000183684|ENST00000505490|ALYREF;ENST00000512673.1_1_17:79846815-79848630:-|nuORF;nc|ENSG00000183684|Q86V81|ALYREF	58.22992032128504	0.22837015374068087	2				NaN	NaN	0	NaN	4293	2974	7266
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7270	22.399	NaN	23796	30	0	7920.7	0.106	+			3207	ASKNQFLPA	9	87	325.84657550609575	974.5178971184873	3	325.8467102050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASKNQFLPA_	ENSG00000217128|ENST00000510461|FNIP1;FNIP1|p.I925Nfs*6|1|0.21|ENSG00000217128|chr5:131671670-131671671|-/T|frameshift_variant;FNIP1|p.K732Nfs*23|1|0.16|ENSG00000217128|chr5:131672248-131672248|T/-|frameshift_variant;FNIP1|p.N877Kfs*2|1|0.45|ENSG00000217128|chr5:131671813-131671814|-/T|frameshift_variant;FNIP1|p.P733Tfs*4|1|0.29|ENSG00000217128|chr5:131672247-131672248|-/T|frameshift_variant;nc|ENSG00000217128|Q8TF40-2|FNIP1;nc|ENSG00000217128|Q8TF40-3|FNIP1	50.0245360154114	0.3026755932229825	2				NaN	NaN	0	NaN	4294	2974	7266
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7271	22.401	NaN	9587.4	30	0	3752.3	0.106	+			15248	GTTAVLTEK	9	63	460.2585225075909	918.5024920819818	2	460.2580871582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTTAVLTEK_	ENSG00000136930|ENST00000259457|PSMB7	68.84614121027924	0.14577793175421136	2				NaN	NaN	0	NaN	4295	2974	7266
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7272	22.403	NaN	34196	30	0	3803.5	0.106			+	28763	NPDVIEEPT	9	110	338.4979972530475	1012.4721623593425	3	338.49822998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NPDVIEEPT_	REV__ENSG00000196924|ENST00000369850|FLNA;REV__FLNA|p.A1026Lfs*20|1|0.42|ENSG00000196924|chrX:154361439-154361439|C/-|frameshift_variant;REV__FLNA|p.D535Mfs*34|1|0.31|ENSG00000196924|chrX:154365224-154365224|C/-|frameshift_variant;REV__FLNA|p.G2237Efs*109|1|0.28|ENSG00000196924|chrX:154352240-154352240|C/-|frameshift_variant;REV__FLNA|p.Q1716Sfs*23|2|0.38|ENSG00000196924|chrX:154354896-154354896|G/-|frameshift_variant;REV__FLNA|p.R2520Vfs*16|1|0.7|ENSG00000196924|chrX:154349560-154349560|G/-|frameshift_variant;REV__nc|ENSG00000196924|P21333-2|FLNA	33.921630207806714	0.48623198279849766	2				NaN	NaN	0	NaN	4296	2974	7266
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7273	22.404	NaN	8628.1	30	0	1072.2	0.034	+			46856	VIIAKVTAK	9	70	471.8210608824506	941.6275688317012	2	471.8206481933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VIIAKVTAK_	ENSG00000155008|ENST00000373173|APOOL	90.36981228632155	0.0638227155548745	2				NaN	NaN	0	NaN	4297	2974	7266
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7290	22.439	NaN	27171	30	0	9454.5	0.214			+	35562	SAWPGAER	8	70	437.2143224841558	872.4140920351116	2	437.2142028808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAWPGAER_	REV__ENST00000492605.5_1_7:44116036-44116168:-|nuORF	47.91560031466742	0.6071945918984287	2				NaN	NaN	0	NaN	4311	2977	7289
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7291	22.443	NaN	21841	30	0	2396.5	0.106	+			39012	SSSGFVAIKK	10	86	512.2954720936171	1022.5763912540343	2	512.2954711914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSSGFVAIKK_	ENSG00000198478|ENST00000369838|SH3BGRL2;SH3BGRL2|p.P55Rfs*41|2|0.28|ENSG00000198478|chr6:79673727-79673727|C/-|frameshift_variant	147.73206827945663	0.008898223230177705	2				NaN	NaN	0	NaN	4312	2977	7289
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7292	22.445	NaN	33888	30	0	5527.1	0.106	+			3690	ATAAAIGATPR	11	89	500.282609383787	998.5506658343741	2	500.28265380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATAAAIGATPR_	ENSG00000137497|ENST00000393695|NUMA1;ENST00000540626.5_1_11:71714575-71718510:-|nuORF;nc|ENSG00000137497|Q14980-2|NUMA1;nc|ENSG00000137497|Q14980-5|NUMA1	112.2953585152457	0.03526820493220478	2				NaN	NaN	0	NaN	4313	2977	7289
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7293	22.447	NaN	21728	30	0	8136.4	0.106				-1	 	0	72	528.2282320514587	1054.4419111697173	2	528.2281494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4314	2977	7289
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7294	22.449	NaN	19035	30	0	4792.6	0.106	+			14864	GTLMWHQMK	9	87	582.2707594019162	1162.5269658706322	2	582.2708129882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Oxidation (M)	_GTLM(Oxidation (M))WHQM(Oxidation (M))K_	ENST00000346169.6_1_3:184032401-184033585:+|nuORF;ENST00000352767.7_2_3:184032446-184033585:+|nuORF	101.60071028292904	0.0375685401170269	2				NaN	NaN	0	NaN	4315	2977	7289
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7295	22.45	NaN	25706	30	0	4400.2	0.034	+			1749	AIAEAMKVK	9	82	480.7808008836423	959.5470488340846	2	480.7808532714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AIAEAMKVK_	DACH1|p.R518Gfs*25|1|0.29|ENSG00000276644|chr13:71557042-71557042|T/-|frameshift_variant;DACH1|p.T596Nfs*2|1|0.28|ENSG00000276644|chr13:71479252-71479253|-/T|frameshift_variant;ENSG00000276644|ENST00000613252|DACH1;nc|ENSG00000276644|Q9UI36-3|DACH1;nc|ENSG00000276644|Q9UI36|DACH1	115.49404669440601	0.023927554121326553	2				NaN	NaN	0	NaN	4316	2977	7289
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7296	22.451	NaN	7551.2	30	0	1096.3	0.138	+			46214	VEAGHTATL	9	58	449.7351352411097	897.4557175490194	2	449.7349853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VEAGHTATL_	ENSG00000142798|ENST00000374695|HSPG2	108.08749611321984	0.03094949498378333	2				NaN	NaN	0	NaN	4317	2977	7289
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7308	22.478	NaN	58722	30	0	19647	0.214				-1	 	0	83	384.77200986210534	767.5294667910107	2	384.7720642089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4326	2980	7307
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7309	22.482	NaN	26241	30	0	6591.7	0.106				-1	 	0	77	601.3010305842231	600.293754117623	1	601.3035278320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4327	2980	7307
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7310	22.484	NaN	9329.5	30	0	1553.5	0.106	+			12605	GEHTPSAL	8	60	406.20108144891674	810.3876099646335	2	406.2007751464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEHTPSAL_	ENSG00000149925|ENST00000642816|ALDOA;ENST00000398050.3_1_10:127355985-127356390:-|nuORF;ENST00000566146.1_1_16:30080209-30080764:+|nuORF;nc|ENSG00000149925|P04075|ALDOA	76.84663266511073	0.3498490246073164	2				NaN	NaN	0	NaN	4328	2980	7307
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7311	22.486	NaN	13641	30	0	3373.2	0.106	+			22328	KTFSVALAEQ	10	82	547.2963482784115	1092.578143623623	2	547.2967529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTFSVALAEQ_	ENST00000518563.5_3_8:42249167-42251383:+|nuORF;ENST00000520115.5_1_8:42249392-42251757:+|nuORF;ENST00000522069.5_1_8:42249392-42251334:+|nuORF	54.722347961057174	0.4138398245444204	2				NaN	NaN	0	NaN	4329	2980	7307
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7312	22.488	NaN	6672.3	30	0	1101	0.106			+	18613	ISSILNSKI	9	81	325.53402844290997	973.58025592893	3	325.5341491699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ISSILNSKI_	REV__ENST00000536163.5_2_7:141385350-141386413:-|nuORF	21.9598887501803	0.5980208138527809	2				NaN	NaN	0	NaN	4330	2980	7307
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7313	22.489	NaN	10296	30	0	1933.5	0.106	+			13195	GIASSSIAAK	10	66	452.7585451137265	903.502537294253	2	452.7584228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GIASSSIAAK_	ENSG00000165949|ENST00000612813|IFI27;nc|ENSG00000165949|P40305-1|IFI27;nc|ENSG00000165949|P40305-3|IFI27;nc|ENSG00000165949|P40305-4|IFI27	163.1509380574825	0.005863099200027773	2				NaN	NaN	0	NaN	4331	2980	7307
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7314	22.491	NaN	7901	30	0	1013.4	0.04				-1	RSMIPCCLCHV	11	77	667.7949358462002	1333.5753187592004	2	667.7945556640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C),Oxidation (M)	_RSM(Oxidation (M))IPCCLC(Carbamidomethyl (C))HV_	ENSG00000111731|ENST00000446597|C2CD5;nc|ENSG00000111731|Q86YS7-2|C2CD5;nc|ENSG00000111731|Q86YS7-4|C2CD5;nc|ENSG00000111731|Q86YS7-5|C2CD5;nc|ENSG00000111731|Q86YS7|C2CD5	36.446750945000026	0.6065623449959539	2				NaN	NaN	0	NaN	4332	2980	7307
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7330	22.525	NaN	18744	30	0	3418.9	0.214	+			18564	ISNQVVSQKP	10	75	550.3091019015677	1098.6036508699353	2	550.3095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ISNQVVSQKP_	ENSG00000164074|ENST00000645843|ABHD18;ENST00000473040.6_1_4:128905516-128956965:+|nuORF;nc|ENSG00000164074|Q0P651-2|ABHD18;nc|ENSG00000164074|Q0P651-3|ABHD18;nc|ENSG00000164074|Q0P651-4|ABHD18;nc|ENSG00000164074|Q0P651|ABHD18	78.26377905018397	0.20980573808910843	2				NaN	NaN	0	NaN	4345	2983	7329
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7331	22.528	NaN	12807	30	0	950.69	0.106	+			45441	TVYRGLVQK	9	82	532.3166656608511	1062.618778388502	2	532.3167114257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVYRGLVQK_	ENSG00000148291|ENST00000371964|SURF2	74.1650062923329	0.12277912660386392	2				NaN	NaN	0	NaN	4346	2983	7329
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7332	22.53	NaN	16370	30	0	6941.3	0.106	+			20214	KELHIQGNRL	10	76	403.23524206648136	1206.6838967996441	3	403.2351379394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KELHIQGNRL_	ENSG00000148484|ENST00000345264|RSU1;ENST00000464074.6_1_10:16769067-16859404:-|nuORF;nc|ENSG00000148484|Q15404-2|RSU1	61.691277971877994	0.35045824941635534	2				NaN	NaN	0	NaN	4347	2983	7329
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7333	22.532	NaN	10452	30	0	2519.9	0.106	+			36674	SGMQNMSIHTK	11	86	617.2897549334124	1232.5649569336247	2	617.2898559570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SGMQNMSIHTK_	CON__H-INV:HIT000292931;CON__P05787;CON__REFSEQ:XP_092267;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	113.94599459749342	0.031855749413226817	2				NaN	NaN	0	NaN	4348	2983	7329
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7334	22.534	NaN	15745	30	0	6299.7	0.106				-1	SRPTLLCPR	9	76	367.2077760592881	1098.6014987780643	3	367.20819091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_SRPTLLC(Carbamidomethyl (C))PR_	ENST00000593129.1_1_19:45988968-45992276:-|nuORF	37.81151784470057	0.4459294069877048	2				NaN	NaN	0	NaN	4349	2983	7329
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7335	22.536	NaN	11081	30	0	992.36	0.035	+			18556	ISNLPTVKK	9	74	500.31368651208044	998.6128200909609	2	500.3135986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ISNLPTVKK_	ENSG00000174156|ENST00000211122|GSTA3;ENSG00000182793|ENST00000370989|GSTA5;ENSG00000243955|ENST00000334575|GSTA1;ENSG00000244067|ENST00000493422|GSTA2;GSTA1|p.L198P|1|0.14|ENSG00000243955|chr6:52791934-52791934|A/G|missense_variant	74.1650062923329	0.12277912660386392	2				NaN	NaN	0	NaN	4350	2983	7329
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7336	22.536	NaN	18109	30	0	3117	0.141	+			33154	RESTGAQVQV	10	78	537.7810849544755	NaN	0	537.7815551757812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RESTGAQVQV_	ENSG00000169564|ENST00000303577|PCBP1;ENSG00000183570|ENST00000681687|PCBP3;ENSG00000197111|ENST00000546463|PCBP2;ENST00000468429.5_1_21:47321003-47359956:+|nuORF;ENST00000547717.1_1_12:53848575-53861193:+|nuORF;nc|ENSG00000183570|P57721-2|PCBP3;nc|ENSG00000183570|P57721-3|PCBP3;nc|ENSG00000183570|P57721-4|PCBP3;nc|ENSG00000183570|P57721-5|PCBP3;nc|ENSG00000197111|Q15366-2|PCBP2;nc|ENSG00000197111|Q15366-4|PCBP2;nc|ENSG00000197111|Q15366-5|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;nc|ENSG00000197111|Q15366-7|PCBP2;nc|ENSG00000197111|Q15366-8|PCBP2;nc|ENSG00000197111|Q15366|PCBP2;PCBP2|p.T202Kfs*26|1|0.32|ENSG00000197111|chr12:53464773-53464773|C/-|frameshift_variant	70.39856735676683	0.14936190052600148	2				NaN	NaN	0	NaN	4351	2983	7329
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7350	22.568	NaN	24594	30	0	3652.3	0.214	+			45239	TVQEHLIEK	9	84	548.8035213396602	1095.5924897461202	2	548.8037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVQEHLIEK_	ENSG00000082898|ENST00000401558|XPO1;ENST00000428210.5_1_2:61705957-61719950:-|nuORF	174.8648734531126	0.001936507438084573	2				NaN	NaN	0	NaN	4362	2986	7349
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7351	22.572	NaN	20952	30	0	4452.7	0.106	+			45671	VAAAESHPL	9	75	447.7378779384821	893.4612029437642	2	447.7373352050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VAAAESHPL_	ENST00000416120.1_1_6:64259201-64259360:-|nuORF;ENST00000489392.1_1_9:136216448-136216496:+|nuORF	163.84426431716093	0.003817671866125946	2				NaN	NaN	0	NaN	4363	2986	7349
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7352	22.574	NaN	13314	30	0	1878.1	0.106			+	9895	EQLSKNEL	8	71	480.75358900198967	959.4926250707794	2	480.75323486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EQLSKNEL_	REV__ENSG00000132780|ENST00000350030|NASP;REV__ENST00000529239.1_1_8:61850915-61851251:-|nuORF;REV__nc|ENSG00000132780|P49321-2|NASP;REV__nc|ENSG00000132780|P49321-3|NASP;REV__nc|ENSG00000132780|P49321-4|NASP	95.81516180277367	0.2598660847282228	2				NaN	NaN	0	NaN	4364	2986	7349
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7353	22.575	NaN	18241	30	0	4143	0.106	+			15074	GTPPQKLPLG	10	83	336.5339368598552	1006.5799811797656	3	336.53411865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTPPQKLPLG_	nc|ENSG00000162105|Q9UPX8-2|SHANK2	34.172542307311794	0.6007644933930345	2				NaN	NaN	0	NaN	4365	2986	7349
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7354	22.577	NaN	22185	30	0	1560.3	0.106	+			38751	SSLQEVYHK	9	91	545.7805501474974	1089.5465473617946	2	545.780029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSLQEVYHK_	ENSG00000143106|ENST00000271308|PSMA5;nc|ENSG00000143106|P28066-2|PSMA5	93.1432384553994	0.056003526918089595	2				NaN	NaN	0	NaN	4366	2986	7349
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7355	22.579	NaN	7561.4	30	0	1124.8	0.037			+	15958	HAHGDAAAMHL	11	64	565.7611140023222	1129.5076750714443	2	565.7613525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HAHGDAAAMHL_	REV__ENSG00000143458|ENST00000368918|GABPB2	40.77816245573522	0.5472954108598816	2				NaN	NaN	0	NaN	4367	2986	7349
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7356	22.58	NaN	5863	30	0	778.35	0.14			+	19654	KDLLVKAVK	9	67	507.33963390343905	1012.6647148736781	2	507.3395080566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KDLLVKAVK_	REV__ANK3|p.I2751Nfs*14|2|0.36|ENSG00000151150|chr10:60072629-60072630|-/T|frameshift_variant;REV__ANK3|p.I2751Yfs*21|1|0.07|ENSG00000151150|chr10:60072630-60072630|T/-|frameshift_variant;REV__ANK3|p.I3117Sfs*2|3|0.22|ENSG00000151150|chr10:60071532-60071532|T/-|frameshift_variant;REV__ANK3|p.K1120Sfs*35|1|0.28|ENSG00000151150|chr10:60088328-60088328|T/-|frameshift_variant;REV__ANK3|p.K2612Rfs*25|1|0.43|ENSG00000151150|chr10:60073046-60073046|T/-|frameshift_variant;REV__ANK3|p.K2850Rfs*29|1|0.08|ENSG00000151150|chr10:60072332-60072332|T/-|frameshift_variant;REV__ANK3|p.K3331Nfs*6|1|0.32|ENSG00000151150|chr10:60070888-60070888|T/-|frameshift_variant;REV__ANK3|p.K3778Nfs*26|1|0.37|ENSG00000151150|chr10:60069547-60069547|T/-|frameshift_variant;REV__ANK3|p.K4020Rfs*45|4|0.35|ENSG00000151150|chr10:60068822-60068822|T/-|frameshift_variant;REV__ANK3|p.K4140Nfs*15|2|0.27|ENSG00000151150|chr10:60064188-60064188|T/-|frameshift_variant;REV__ANK3|p.L1161Pfs*13|1|0.32|ENSG00000151150|chr10:60088205-60088206|-/G|frameshift_variant;REV__ANK3|p.L1778Tfs*66|1|0.38|ENSG00000151150|chr10:60075550-60075551|-/G|frameshift_variant;REV__ANK3|p.M3608Cfs*4|1|0.37|ENSG00000151150|chr10:60070059-60070059|T/-|frameshift_variant;REV__ANK3|p.P2846Tfs*8|1|0.32|ENSG00000151150|chr10:60072346-60072347|-/C|frameshift_variant;REV__ANK3|p.R961Kfs*27|1|0.13|ENSG00000151150|chr10:60114291-60114292|-/T|frameshift_variant;REV__ANK3|p.S4352Vfs*2|1|0.51|ENSG00000151150|chr10:60055669-60055670|-/C|frameshift_variant;REV__ANK3|p.W4141Mfs*12|1|0.36|ENSG00000151150|chr10:60064187-60064188|-/T|frameshift_variant;REV__ENSG00000151150|ENST00000280772|ANK3;REV__nc|ENSG00000151150|Q12955-4|ANK3;REV__nc|ENSG00000151150|Q12955-5|ANK3	31.529811441608018	0.5085848003137583	2				NaN	NaN	0	NaN	4368	2986	7349
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7370	22.61	NaN	31877	30	0	12740	0.214				-1	 	0	86	362.758759138645	723.5029653440901	2	362.7588806152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4379	2989	7369
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7371	22.613	NaN	21454	30	0	3567.4	0.106	+			46353	VEKPVGVAA	9	87	435.2587267740069	868.5029006148138	2	435.2583923339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VEKPVGVAA_	ENSG00000131149|ENST00000253458|GSE1;ENST00000562659.1_1_16:85698640-85699994:+|nuORF;GSE1|p.P1093Qfs*45|1|0.45|ENSG00000131149|chr16:85668282-85668282|C/-|frameshift_variant;nc|ENSG00000131149|Q14687-2|GSE1;nc|ENSG00000131149|Q14687-3|GSE1	49.536043120802724	0.308405419312776	2				NaN	NaN	0	NaN	4380	2989	7369
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7372	22.616	NaN	12235	30	0	862.82	0.106	+			48813	VVAGSERLGF	10	81	517.7830845946651	1033.55161625613	2	517.7838134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVAGSERLGF_	ENSG00000170927|ENST00000371117|PKHD1;nc|ENSG00000170927|P08F94-2|PKHD1	67.49366992349736	0.29779660154124327	2				NaN	NaN	0	NaN	4381	2989	7369
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7373	22.617	NaN	15459	30	0	1266.9	0.106	+			44717	TTLGHAVLK	9	76	470.28514989081185	938.5557468484237	2	470.2848205566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TTLGHAVLK_	ENSG00000139842|ENST00000375440|CUL4A;nc|ENSG00000139842|Q13619-2|CUL4A	82.24051045832904	0.08786059719216216	2				NaN	NaN	0	NaN	4382	2989	7369
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7374	22.619	NaN	12281	30	0	1031.6	0.106	+			41457	SVNNPILRK	9	78	520.814488226885	1039.61442352057	2	520.8148193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVNNPILRK_	ENSG00000089022|ENST00000550735|MAPKAPK5;nc|ENSG00000089022|Q8IW41|MAPKAPK5	112.2953585152457	0.026655838328212944	2				NaN	NaN	0	NaN	4383	2989	7369
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7375	22.621	NaN	18295	30	0	2546.6	0.106	+			27122	MAPYYEAL	8	77	487.22142988762675	972.4283068420535	2	487.2210693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_M(Oxidation (M))APYYEAL_	ENSG00000163636|ENST00000295901|PSMD6;ENST00000476464.5_1_3:63996346-64008248:-|nuORF;nc|ENSG00000163636|Q15008-2|PSMD6;nc|ENSG00000163636|Q15008-3|PSMD6;nc|ENSG00000163636|Q15008-4|PSMD6	54.76467175910256	0.5536104764165384	2				NaN	NaN	0	NaN	4384	2989	7369
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7376	22.623	NaN	7300.2	30	0	961.3	0.031	+			3375	ASPKPAGK	8	81	378.2241854087894	754.4338178843789	2	378.22430419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASPKPAGK_	ARID5A|p.R213Gfs*55|1|0.21|ENSG00000196843|chr2:96551159-96551159|C/-|frameshift_variant;ENSG00000196843|ENST00000357485|ARID5A	44.116797842482775	0.6307669463330267	2				NaN	NaN	0	NaN	4385	2989	7369
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7390	22.652	NaN	48980	30	0	5873.4	0.214	+			3381	ASQCGSLIGK	10	82	510.7607329133091	1019.5069128934182	2	510.7610168457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_ASQC(Carbamidomethyl (C))GSLIGK_	ENSG00000090097|ENST00000461554|PCBP4;ENSG00000183570|ENST00000681687|PCBP3;ENSG00000197111|ENST00000546463|PCBP2;ENST00000468429.5_1_21:47321003-47359956:+|nuORF;ENST00000492809.5_1_3:51992079-51994784:-|nuORF;ENST00000497390.5_1_3:51992079-51994784:-|nuORF;ENST00000547717.1_1_12:53848575-53861193:+|nuORF;ENST00000548190.1_1_12:53849722-53854210:+|nuORF;nc|ENSG00000090097|P57723-2|PCBP4;nc|ENSG00000183570|P57721-2|PCBP3;nc|ENSG00000183570|P57721-3|PCBP3;nc|ENSG00000183570|P57721-4|PCBP3;nc|ENSG00000183570|P57721-5|PCBP3;nc|ENSG00000197111|Q15366-2|PCBP2;nc|ENSG00000197111|Q15366-4|PCBP2;nc|ENSG00000197111|Q15366-5|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;nc|ENSG00000197111|Q15366-7|PCBP2;nc|ENSG00000197111|Q15366-8|PCBP2;nc|ENSG00000197111|Q15366|PCBP2;PCBP2|p.T202Kfs*26|1|0.32|ENSG00000197111|chr12:53464773-53464773|C/-|frameshift_variant;PCBP4|p.G203Efs*11|1|0.1|ENSG00000090097|chr3:51959397-51959398|-/CTCT|frameshift_variant	139.38205640894643	0.010918844784185366	2				NaN	NaN	0	NaN	4396	2992	7389
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7391	22.655	NaN	28363	30	0	5032	0.106			+	47035	VLCYVKKK	8	72	490.80172800258765	979.5889030719753	2	490.80181884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VLCYVKKK_	REV__ENST00000519324.1_1_8:99264547-99306317:-|nuORF	82.30502934623384	0.30436709589983096	2				NaN	NaN	0	NaN	4397	2992	7389
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7392	22.658	NaN	29001	30	0	4723.3	0.106	+			8873	EERRIKEIV	9	77	391.2314203419644	1170.6724316260932	3	391.2314147949219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EERRIKEIV_	ENSG00000080824|ENST00000216281|HSP90AA1;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;HSP90AA1|p.K419Nfs*3|1|0.25|ENSG00000080824|chr14:102083874-102083874|T/-|frameshift_variant;HSP90AA1|p.S330Qfs*48|1|0.21|ENSG00000080824|chr14:102084558-102084558|A/-|frameshift_variant;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000205955|Q58FG0|HSP90AA5P	35.61828744233558	0.47037581924408073	2				NaN	NaN	0	NaN	4398	2992	7389
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7393	22.659	NaN	18615	30	0	6408.6	0.106	+			4315	ATGKRFYFK	9	71	559.3113397929748	1116.6081266527494	2	559.3118896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATGKRFYFK_	CLCA1|p.N76_V77insLLF|1|0.06|ENSG00000016490|chr1:86473481-86473482|-/CTTGTTATT|inframe_insertion;CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	79.71258880314673	0.09879134589249085	2				NaN	NaN	0	NaN	4399	2992	7389
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7394	22.661	NaN	17249	30	0	2788.2	0.106	+			41240	SVLGKDEQINK	11	90	615.8387226771283	1229.6628924210565	2	615.838623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVLGKDEQINK_	ENSG00000197579|ENST00000360538|TOPORS;nc|ENSG00000197579|Q9NS56-2|TOPORS	147.30332882356183	7.500266899103772E-05	2				NaN	NaN	0	NaN	4400	2992	7389
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7395	22.663	NaN	7967	30	0	1006.4	0.037	+			40007	STMSIRVTQK	10	79	575.8166265929513	1149.6187002527024	2	575.8168334960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STMSIRVTQK_	nc|ENSG00000170421|P05787-2|KRT8	94.4091291819064	0.10583072883246657	2				NaN	NaN	0	NaN	4401	2992	7389
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7396	22.664	NaN	9264.1	30	0	932.02	0.14	+			45735	VADPETRTV	9	80	494.25897784556525	986.5034027579305	2	494.25927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VADPETRTV_	ENSG00000039650|ENST00000322344|PNKP;ENST00000593946.5_1_19:50364507-50370327:-|nuORF;ENST00000594661.5_1_19:50367579-50369988:-|nuORF;ENST00000595792.1_1_19:50369586-50370764:-|nuORF;nc|ENSG00000039650|Q96T60-2|PNKP	51.52775601994872	0.28504342437107444	2				NaN	NaN	0	NaN	4402	2992	7389
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7408	22.691	NaN	87016	30	0	25802	0.199	+			5828	AVIGNVQEK	9	76	479.2717246064806	956.5288962797612	2	479.27154541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVIGNVQEK_	ENSG00000124786|ENST00000644923|SLC35B3;nc|ENSG00000124786|Q9H1N7-3|SLC35B3	145.15565482312357	0.00806134135205793	2				NaN	NaN	0	NaN	4411	2995	7407
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7409	22.695	NaN	61198	30	0	11539	0.106	+			45068	TVHNIIVGK	9	114	327.53458765370215	979.5819335613064	3	327.5346374511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVHNIIVGK_	ENSG00000110048|ENST00000263847|OSBP;ENSG00000184792|ENST00000332585|OSBP2;nc|ENSG00000184792|Q969R2-2|OSBP2;nc|ENSG00000184792|Q969R2-3|OSBP2;nc|ENSG00000184792|Q969R2-4|OSBP2;nc|ENSG00000184792|Q969R2-5|OSBP2;nc|ENSG00000184792|Q969R2-6|OSBP2	104.74654710444128	0.034358562718640136	2				NaN	NaN	0	NaN	4412	2995	7407
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7410	22.697	NaN	28593	30	0	5440.6	0.106	+			16898	HPIQTQAQY	9	83	543.2721747131268	1084.5297964930535	2	543.272705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HPIQTQAQY_	ENSG00000161813|ENST00000398473|LARP4;ENST00000521120.1_1_12:50835423-50848201:+|nuORF;LARP4|p.N373Ifs*3|1|0.26|ENSG00000161813|chr12:50454408-50454408|A/-|frameshift_variant;nc|ENSG00000161813|Q71RC2-2|LARP4;nc|ENSG00000161813|Q71RC2-3|LARP4;nc|ENSG00000161813|Q71RC2-4|LARP4;nc|ENSG00000161813|Q71RC2-6|LARP4;nc|ENSG00000161813|Q71RC2-7|LARP4	162.25246889848123	0.0040893836092247005	2				NaN	NaN	0	NaN	4413	2995	7407
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7411	22.699	NaN	22812	30	0	5325.8	0.106			+	3786	ATAGALMARQK	11	88	373.2096122107544	1116.6070072324633	3	373.2098388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATAGALMARQK_	REV__ENSG00000113522|ENST00000378823|RAD50;REV__nc|ENSG00000113522|Q92878-2|RAD50;REV__nc|ENSG00000113522|Q92878-3|RAD50;REV__RAD50|p.K722Gfs*5|1|0.35|ENSG00000113522|chr5:132595760-132595761|AA/-|frameshift_variant;REV__RAD50|p.N934Ifs*6|1|0.26|ENSG00000113522|chr5:132608690-132608690|A/-|frameshift_variant	35.17822180527639	0.6208003396870814	2				NaN	NaN	0	NaN	4414	2995	7407
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7412	22.7	NaN	18345	30	0	2266.6	0.106	+			48288	VTDSPRILK	9	80	514.8088187157044	1027.6030844982088	2	514.80859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTDSPRILK_	ENSG00000142197|ENST00000691173|DOP1B;nc|ENSG00000142197|Q9Y3R5-2|DOP1B	169.6522961985778	0.0028262690464207238	2				NaN	NaN	0	NaN	4415	2995	7407
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7413	22.702	NaN	18627	30	0	2215.5	0.106	+			8208	EADLQNAVI	9	94	486.7529040036664	971.4912550741328	2	486.7532043457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EADLQNAVI_	ENSG00000173960|ENST00000309033|UBXN2A;nc|ENSG00000173960|P68543-2|UBXN2A;UBXN2A|p.T250Nfs*5|1|0.33|ENSG00000173960|chr2:23999829-23999830|-/A|frameshift_variant	74.25504064058377	0.12238981753128622	2				NaN	NaN	0	NaN	4416	2995	7407
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7414	22.704	NaN	22827	30	0	2869.4	0.038	+			37251	SKYQLQKKTQ	10	81	626.3559911867484	1250.6974294402967	2	626.3565063476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SKYQLQKKTQ_	DNTTIP2|p.R633Tfs*24|1|0.25|ENSG00000067334|chr1:93873124-93873125|-/T|frameshift_variant	71.87747018426188	0.26198133118427214	2				NaN	NaN	0	NaN	4417	2995	7407
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7428	22.733	NaN	44022	30	0	4169.7	0.214	+			39923	STMDLVKSK	9	99	504.77309746003095	1007.5316419868619	2	504.7733154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STMDLVKSK_	ENSG00000107625|ENST00000373585|DDX50	177.3047273071476	0.0015666121956477066	2				NaN	NaN	0	NaN	4428	2998	7427
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7429	22.736	NaN	60253	30	0	9339.8	0.106				-1	 	0	104	519.2838753396735	518.2765988730735	1	519.2850952148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4429	2998	7427
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7430	22.738	NaN	35038	30	0	3796.2	0.106	+			20353	KESEIKKLV	9	104	537.3321751024886	1072.649797271777	2	537.3322143554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KESEIKKLV_	tr|U7T8A7|U7T8A7_FUSNUPTSsystem,N-acetylglucosamine-specificIIBCcomponentOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00177PE=4SV=1	77.31757898189308	0.1091473830098891	2				NaN	NaN	0	NaN	4430	2998	7427
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7431	22.74	NaN	81449	30	0	8413.4	0.106	+			3803	ATAGIIGVNRK	11	104	550.3326290442408	1098.6507051552815	2	550.3333129882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATAGIIGVNRK_	CLTC-CEP95|1|fusion;CLTC|p.A1374*|1|0.05|ENSG00000141367|chr17:59683464-59683465|-/TA|frameshift_variant;CLTC|p.D632Yfs*7|1|0.15|ENSG00000141367|chr17:59666589-59666590|-/TTACA|frameshift_variant;ENSG00000141367|ENST00000269122|CLTC;ENST00000472129.3_1_17:57725612-57733400:+|nuORF;nc|ENSG00000141367|Q00610-2|CLTC	150.15188659993407	7.025925813289175E-05	2				NaN	NaN	0	NaN	4431	2998	7427
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7432	22.742	NaN	65403	30	0	28999	0.106			+	37097	SISLTSCKAV	10	105	336.8510351106312	1007.5312759320936	3	336.8512878417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SISLTSCKAV_	REV__ENSG00000243627|ENST00000450895|SMIM34	45.97224482568171	0.49411383603842696	2				NaN	NaN	0	NaN	4432	2998	7427
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7433	22.744	NaN	86682	30	0	25669	0.037				-1	 	0	89	367.22400046227455	1098.6501719870237	3	367.2242431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4433	2998	7427
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7434	22.744	NaN	16648	30	0	2380.1	0.138	+			19409	KAPGTNVAM	9	76	444.7337775862082	887.4530022392164	2	444.7339782714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KAPGTNVAM_	ENSG00000153201|ENST00000283195|RANBP2;RANBP2|p.C2737Vfs*35|1|0.18|ENSG00000153201|chr2:108772957-108772957|T/-|frameshift_variant;RANBP2|p.F3068Lfs*10|1|0.06|ENSG00000153201|chr2:108782692-108782692|T/-|frameshift_variant;RANBP2|p.H3114Sfs*18|1|0.33|ENSG00000153201|chr2:108782827-108782828|-/T|frameshift_variant;RANBP2|p.K1989Nfs*9|1|0.05|ENSG00000153201|chr2:108766505-108766506|-/TATCCTG|frameshift_variant;RANBP2|p.K2576Nfs*63|2|0.22|ENSG00000153201|chr2:108768262-108768262|A/-|frameshift_variant;RANBP2|p.S1486Rfs*51|1|0.05|ENSG00000153201|chr2:108764996-108764997|-/ATTTTGTATTC|frameshift_variant	85.86182877749512	0.07653218437724067	2				NaN	NaN	0	NaN	4434	2998	7427
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7445	22.771	NaN	30467	30	0	4580.2	0.214	+			15041	GTNPGIITK	9	82	450.76125100115905	899.5079490691181	2	450.7608947753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTNPGIITK_	ENSG00000136247|ENST00000335965|ZDHHC4;ENST00000474097.5_1_7:6620192-6623202:+|nuORF	126.24258497203832	0.01742065577488747	2				NaN	NaN	0	NaN	4442	3001	7444
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7446	22.774	NaN	26809	30	0	3231.9	0.106			+	-1	PCQTSEVLMR	10	87	590.2780214613214	1178.5414899894427	2	590.2786254882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_PCQTSEVLM(Oxidation (M))R_	REV__FAM178B|p.K398Sfs*35|1|0.13|ENSG00000168754|chr2:96960426-96960426|T/-|frameshift_variant	115.49404669440601	0.03369372856552391	2				NaN	NaN	0	NaN	4443	3001	7444
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7447	22.776	NaN	18044	30	0	3309.2	0.106	+			6484	AVYSHVIQK	9	92	522.795615181184	1043.5766774291678	2	522.7957153320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVYSHVIQK_	ENSG00000135094|ENST00000257549|SDS;SDS|p.G305Afs*18|1|0.17|ENSG00000135094|chr12:113393014-113393014|C/-|frameshift_variant	95.81516180277367	0.04847050768394289	2				NaN	NaN	0	NaN	4444	3001	7444
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7448	22.778	NaN	18560	30	0	2343.9	0.106	+			26369	LTCPPTKVYK	10	90	603.8317117184193	1205.6488705036386	2	603.831298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_LTC(Carbamidomethyl (C))PPTKVYK_	ENSG00000117983|ENST00000529681|MUC5B	85.86182877749512	0.1547657473298402	2				NaN	NaN	0	NaN	4445	3001	7444
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7449	22.78	NaN	22542	30	0	1770	0.106			+	19800	KEATPRKK	8	76	479.29552900106916	956.5765050689383	2	479.2954406738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEATPRKK_	REV__ENSG00000011566|ENST00000263881|MAP4K3;REV__ENSG00000168067|ENST00000294066|MAP4K2;REV__MAP4K2|p.G667Lfs*24|1|0.38|ENSG00000168067|chr11:64792003-64792004|-/AC|frameshift_variant;REV__MAP4K2|p.S298Pfs*38|1|0.31|ENSG00000168067|chr11:64800133-64800133|G/-|frameshift_variant;REV__nc|ENSG00000011566|Q8IVH8-2|MAP4K3;REV__nc|ENSG00000011566|Q8IVH8-3|MAP4K3;REV__nc|ENSG00000168067|Q12851-2|MAP4K2	87.69643885390035	0.28444366722805053	2				NaN	NaN	0	NaN	4446	3001	7444
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7450	22.782	NaN	13823	30	0	5281.2	0.106	+			6485	AVYSHVIQK	9	75	348.86590319575816	1043.5758801874745	3	348.8659973144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AVYSHVIQK_	ENSG00000135094|ENST00000257549|SDS;SDS|p.G305Afs*18|1|0.17|ENSG00000135094|chr12:113393014-113393014|C/-|frameshift_variant	31.954861631926434	0.5046124803899898	2				NaN	NaN	0	NaN	4447	3001	7444
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7451	22.783	NaN	12667	30	0	2134.7	0.034			+	20855	KILRNNLG	8	72	464.29043264916663	926.5663123651333	2	464.2900695800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KILRNNLG_	REV__ENSG00000188811|ENST00000379600|NHLRC3;REV__ENST00000485407.1_1_13:39616195-39618420:+|nuORF;REV__NHLRC3|p.K334Nfs*5|1|0.23|ENSG00000188811|chr13:39047880-39047880|A/-|frameshift_variant	97.47269410471826	0.25484828363392314	2				NaN	NaN	0	NaN	4448	3001	7444
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7464	22.811	NaN	33636	30	0	7369.4	0.214	+			40945	SVFTSVRQK	9	83	526.2984538449402	1050.5823547566804	2	526.2985229492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVFTSVRQK_	ENSG00000127616|ENST00000344626|SMARCA4;ENST00000585799.5_1_19:11132109-11172489:+|nuORF;ENST00000591595.5_1_19:11130023-11172489:+|nuORF;ENST00000592604.5_1_19:11123597-11172489:+|nuORF;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;nc|ENSG00000127616|P51532-5|SMARCA4	139.97047562133406	0.010493916756945389	2				NaN	NaN	0	NaN	4458	3004	7463
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7465	22.814	NaN	28469	30	0	3954.3	0.106	+			34666	RVRQASVADYE	11	92	647.3306471586731	1292.646741384146	2	647.330810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RVRQASVADYE_	ALDH7A1|p.E507Gfs*5|1|0.1|ENSG00000164904|chr5:126546371-126546372|-/T|frameshift_variant;ENSG00000164904|ENST00000409134|ALDH7A1;nc|ENSG00000164904|P49419-2|ALDH7A1;nc|ENSG00000164904|P49419-4|ALDH7A1	47.95952297671804	0.44903247279694136	2				NaN	NaN	0	NaN	4459	3004	7463
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7466	22.817	NaN	11608	30	0	1494.3	0.106	+			41318	SVLQECEKK	9	86	532.2762422055071	1062.537931477814	2	532.2763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVLQECEKK_	ENSG00000173193|ENST00000474629|PARP14;nc|ENSG00000173193|Q460N5-1|PARP14;nc|ENSG00000173193|Q460N5-3|PARP14;nc|ENSG00000173193|Q460N5-4|PARP14;nc|ENSG00000173193|Q460N5-5|PARP14;PARP14|p.N1416Efs*19|1|0.2|ENSG00000173193|chr3:122718388-122718389|-/A|frameshift_variant	136.26810882979174	0.012230845423532208	2				NaN	NaN	0	NaN	4460	3004	7463
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7467	22.818	NaN	12786	30	0	4799.2	0.106			+	26802	LVSKTKPKP	9	76	333.21815433537284	996.6326336063186	3	333.2182922363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LVSKTKPKP_	REV__ENSG00000152582|ENST00000356031|SPEF2;REV__nc|ENSG00000152582|Q9C093-2|SPEF2;REV__SPEF2|p.I1348Nfs*12|1|0.34|ENSG00000152582|chr5:35773981-35773982|-/A|frameshift_variant	47.95952297671804	0.32689736945648856	2				NaN	NaN	0	NaN	4461	3004	7463
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7468	22.82	NaN	17220	30	0	3886.9	0.106	+			42624	TAVDLVITEV	10	71	353.8694769784995	1058.5866015356985	3	353.8696594238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TAVDLVITEV_	ENSG00000011454|ENST00000373647|RABGAP1;nc|ENSG00000188394|Q9Y3P9-2|RABGAP1;nc|ENSG00000188394|Q9Y3P9-3|RABGAP1	37.15910966729921	0.575322462179216	2				NaN	NaN	0	NaN	4462	3004	7463
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7469	22.822	NaN	14806	30	0	2682.4	0.106	+			40928	SVFSDKLHSK	10	75	574.3092899957923	1146.6040270583844	2	574.309326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVFSDKLHSK_	ENSG00000187257|ENST00000334955|RSBN1L;nc|ENSG00000187257|Q6PCB5-2|RSBN1L;PTPN12-RSBN1L|1|fusion;PTPN12-RSBN1L|2|fusion;PTPN12-RSBN1L|3|fusion;PTPN12-RSBN1L|4|fusion;PTPN12-RSBN1L|5|fusion;PTPN12-RSBN1L|6|fusion;PTPN12-RSBN1L|7|fusion;PTPN12-RSBN1L|8|fusion	65.69465075029274	0.3140480584506322	2				NaN	NaN	0	NaN	4463	3004	7463
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7470	22.824	NaN	12631	30	0	1361	0.034	+			18466	ISFDASKAK	9	73	483.76636882030755	965.5181847074151	2	483.7662048339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ISFDASKAK_	ENSG00000075568|ENST00000186436|TMEM131;TMEM131|p.G555Wfs*10|1|0.32|ENSG00000075568|chr2:97812704-97812705|-/A|frameshift_variant;TMEM131|p.L1469Tfs*5|1|0.43|ENSG00000075568|chr2:97772340-97772341|-/T|frameshift_variant;TMEM131|p.L538Ffs*27|1|0.09|ENSG00000075568|chr2:97813974-97813975|-/A|frameshift_variant;TMEM131|p.N815Ifs*2|1|0.27|ENSG00000075568|chr2:97802749-97802749|T/-|frameshift_variant;TMEM131|p.N815Kfs*9|1|0.31|ENSG00000075568|chr2:97802748-97802749|-/T|frameshift_variant	114.8945686534367	0.024290463251177924	2				NaN	NaN	0	NaN	4464	3004	7463
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7483	22.851	NaN	43876	30	0	10206	0.214			+	10274	ETLSKGLVVA	10	122	339.5375705501441	1015.5908822506324	3	339.5377197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ETLSKGLVVA_	REV__ENSG00000124406|ENST00000381668|ATP8A1;REV__nc|ENSG00000124406|Q9Y2Q0-2|ATP8A1;REV__nc|ENSG00000124406|Q9Y2Q0-3|ATP8A1	58.78195531508484	0.37691818691852547	2				NaN	NaN	0	NaN	4474	3007	7482
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7484	22.855	NaN	66804	30	0	29766	0.106				-1	ASKFMTHVA	9	107	336.50385513904985	1006.4897360173495	3	336.50408935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_ASKFM(Oxidation (M))THVA_	ENSG00000113272|ENST00000231198|THG1L	35.61828744233558	0.47037581924408073	2				NaN	NaN	0	NaN	4475	3007	7482
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7485	22.857	NaN	12924	30	0	3291.5	0.106				-1	 	0	77	384.77200986210534	767.5294667910107	2	384.7721252441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4476	3007	7482
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7486	22.859	NaN	19136	30	0	1872	0.106	+			38930	SSQNAFMQK	9	83	520.7453050981115	1039.476057263023	2	520.7455444335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSQNAFMQK_	ENST00000533415.5_1_17:45247369-45258963:-|nuORF	126.24258497203832	0.01742065577488747	2				NaN	NaN	0	NaN	4477	3007	7482
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7487	22.86	NaN	14707	30	0	982.67	0.106	+			42825	TEAVVKEKL	9	78	508.804864498099	1015.595176062998	2	508.80303955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TEAVVKEKL_	ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1	112.41091882917199	0.026537921851008135	2				NaN	NaN	0	NaN	4478	3007	7482
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7488	22.862	NaN	14515	30	0	7422.9	0.106				-1	 	0	69	487.7354059060919	973.4562588789838	2	487.7351989746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4479	3007	7482
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7489	22.864	NaN	5782	30	0	1926.8	0.035	+			25878	LSFSVSAQK	9	65	322.84648246568327	965.5176179972498	3	322.8466491699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSFSVSAQK_	ENSG00000162739|ENST00000368057|SLAMF6;nc|ENSG00000162739|Q96DU3-2|SLAMF6;nc|ENSG00000162739|Q96DU3-3|SLAMF6	35.61828744233558	0.47037581924408073	2				NaN	NaN	0	NaN	4480	3007	7482
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7504	22.895	NaN	8494.3	30	0	426.78	0.214				-1	 	0	90	330.50043789688493	988.4794842908548	3	330.5005798339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4492	3010	7503
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7505	22.898	NaN	20081	30	0	9618.6	0.106	+			5954	AVLKPGAWSRK	11	93	404.91203266330774	1211.7142685901233	3	404.9118347167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVLKPGAWSRK_	ENST00000308521.9_1_22:39436844-39436913:+|nuORF	67.21430809963624	0.25905749411346113	2				NaN	NaN	0	NaN	4493	3010	7503
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7506	22.9	NaN	23389	30	0	2152.3	0.106			+	26296	LSVDREAGH	9	93	492.2490161288775	982.483479324555	2	492.2488098144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSVDREAGH_	REV__ENST00000393459.5_1_10:102791110-102792147:+|nuORF	66.42927471994793	0.16001998865088202	2				NaN	NaN	0	NaN	4494	3010	7503
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7507	22.902	NaN	6654	30	0	1418.9	0.106				-1	STACPTGGD	9	61	433.17163200896636	864.3287110847327	2	433.1717529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_STAC(Carbamidomethyl (C))PTGGD_	nc|ENSG00000143303|Q96FB5-2|METTL25B;PRCC-RRNAD1|1|fusion;PRCC-RRNAD1|3|fusion	37.15910966729921	0.4535818937225704	2				NaN	NaN	0	NaN	4495	3010	7503
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7508	22.904	NaN	8304.3	30	0	962.62	0.106	+			2908	ASAYSIAQK	9	67	469.7507255435581	937.4868981539162	2	469.75042724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASAYSIAQK_	ENSG00000162813|ENST00000322067|BPNT1;nc|ENSG00000162813|O95861-2|BPNT1;nc|ENSG00000162813|O95861-4|BPNT1	120.8684288430529	0.02067403653475984	2				NaN	NaN	0	NaN	4496	3010	7503
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7509	22.906	NaN	9367.4	30	0	2219	0.037	+			47105	VLLPAPRAPGR	11	72	573.8592949590093	1145.7040369848185	2	573.8591918945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VLLPAPRAPGR_	ENST00000274203.13_1_5:16936005-16936380:-|nuORF	31.529811441608018	0.6590691889962369	2				NaN	NaN	0	NaN	4497	3010	7503
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7510	22.907	NaN	7746.8	30	0	1283.6	0.143	+			6940	CPFQKRRLDG	10	76	610.3224191045101	1218.6302852758201	2	610.322021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_CPFQKRRLDG_	nc|ENSG00000112249|Q8N3C0-3|ASCC3	66.96192283764107	0.30252237217063654	2				NaN	NaN	0	NaN	4498	3010	7503
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7522	22.934	NaN	42044	30	0	8505.6	0.214	+			39089	SSSSVLINK	9	82	467.7638830180848	933.5132131029696	2	467.7635192871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSSSVLINK_	ENSG00000120278|ENST00000696526|PLEKHG1	167.22876102047192	0.0032399547248545047	2				NaN	NaN	0	NaN	4507	3013	7521
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7523	22.938	NaN	25819	30	0	6315.1	0.106	+			17003	HPTDDTTTL	9	68	500.73285961318277	999.4511662931656	2	500.732666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HPTDDTTTL_	ENSG00000089327|ENST00000392219|FXYD5;ENST00000591716.6_1_19:35651643-35657154:+|nuORF;nc|ENSG00000089327|Q96DB9-2|FXYD5	90.77665401227738	0.06267569666681755	2				NaN	NaN	0	NaN	4508	3013	7521
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7524	22.94	NaN	17486	30	0	9729.3	0.106	+			10206	ETFSGVYKK	9	77	529.7794333552491	1057.5443137772982	2	529.77978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ETFSGVYKK_	ENSG00000171863|ENST00000645674|RPS7;ENST00000444127.1_1_1:68708159-68708657:-|nuORF;ENST00000484240.1_1_17:44798950-44799232:-|nuORF	51.19269402634007	0.2889735674168909	2				NaN	NaN	0	NaN	4509	3013	7521
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7525	22.942	NaN	9846.2	30	0	1387.2	0.106	+			48423	VTISHAIGR	9	72	477.27955076393795	952.5445485946759	2	477.2797546386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTISHAIGR_	ENSG00000007376|ENST00000007264|RPUSD1	139.97047562133406	0.010493916756945389	2				NaN	NaN	0	NaN	4510	3013	7521
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7526	22.944	NaN	8316	30	0	836.82	0.106	+			12090	GAARFALQK	9	75	481.2822560836006	960.5499592340012	2	481.2821350097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GAARFALQK_	ENSG00000005175|ENST00000005386|RPAP3;nc|ENSG00000005175|Q9H6T3-2|RPAP3;nc|ENSG00000005175|Q9H6T3-3|RPAP3	71.87747018426188	0.13267044672804276	2				NaN	NaN	0	NaN	4511	3013	7521
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7527	22.946	NaN	15737	30	0	2079.2	0.106			+	26149	LSQHETSI	8	70	457.7323138681983	NaN	0	457.7322082519531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSQHETSI_	REV__ENSG00000143452|ENST00000361824|HORMAD1;REV__HORMAD1|p.N235Ifs*12|1|0.22|ENSG00000143452|chr1:150706653-150706653|T/-|frameshift_variant;REV__nc|ENSG00000143452|Q86X24-2|HORMAD1	111.64827973302667	1.7418937515398478	2				NaN	NaN	0	NaN	4512	3013	7521
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7528	22.947	NaN	17604	30	0	8858.4	0.037			+	-1	SRCQIMLDI	9	62	379.19259944865576	1134.5559689461672	3	379.1929626464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_SRC(Carbamidomethyl (C))QIMLDI_	REV__ENST00000446265.3_1:149647111-149647681:+|nuORF	35.15202426646627	0.4747332964206883	2				NaN	NaN	0	NaN	4513	3013	7521
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7540	22.974	NaN	49571	30	0	12746	0.214	+			40585	SVAGDFVKK	9	91	475.76894758994837	949.5233422466968	2	475.7687072753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVAGDFVKK_	ENSG00000165238|ENST00000427277|WNK2;nc|ENSG00000165238|Q9Y3S1-2|WNK2;nc|ENSG00000165238|Q9Y3S1-4|WNK2;nc|ENSG00000165238|Q9Y3S1|WNK2;WNK2|p.T1980Lfs*12|2|0.16|ENSG00000165238|chr9:93297965-93297965|C/-|frameshift_variant	158.07458414430337	0.004987072822166904	2				NaN	NaN	0	NaN	4522	3016	7539
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7541	22.977	NaN	19953	30	0	2955.8	0.106	+			49372	VVSTVGMQR	9	84	488.76606199417137	975.5175710551428	2	488.7657775878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVSTVGMQR_	CON__P35900;ENSG00000171431|ENST00000167588|KRT20	95.81516180277367	0.04847050768394289	2				NaN	NaN	0	NaN	4523	3016	7539
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7542	22.979	NaN	14859	30	0	4363.3	0.106	+			36151	SEKVDRAVL	9	85	339.52909894641175	1015.5654674394352	3	339.529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEKVDRAVL_	ENSG00000123240|ENST00000378747|OPTN;nc|ENSG00000123240|Q96CV9-2|OPTN;nc|ENSG00000123240|Q96CV9-3|OPTN	58.22992032128504	0.22837015374068087	2				NaN	NaN	0	NaN	4524	3016	7539
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7543	22.981	NaN	11972	30	0	3434.5	0.106	+			26122	LSPHMHML	8	79	483.2372984115468	964.4600438898937	2	483.2370300292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSPHMHML_	ENST00000451871.1_1_13:42499863-42500601:+|nuORF	54.76467175910256	0.5536104764165384	2				NaN	NaN	0	NaN	4525	3016	7539
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7544	22.983	NaN	24001	30	0	6222.4	0.106	+			43416	TGKISFKNL	9	95	336.5339368598552	1006.5799811797656	3	336.5341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TGKISFKNL_	ENSG00000147400|ENST00000370277|CETN2;ENSG00000177143|ENST00000327228|CETN1;ENST00000493482.1_1_X:151996387-151997293:-|nuORF	29.14955571784316	0.5308295550522326	2				NaN	NaN	0	NaN	4526	3016	7539
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7545	22.985	NaN	7669.4	30	0	1196.8	0.106	+			44763	TTNLSIQQK	9	77	516.7879251886708	1031.5612974441415	2	516.787841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TTNLSIQQK_	ENSG00000112701|ENST00000447266|SENP6;ENST00000474906.2_1_6:76388527-76407234:+|nuORF;nc|ENSG00000112701|Q9GZR1-2|SENP6;SENP6|p.G1004Efs*11|4|0.34|ENSG00000112701|chr6:75713700-75713700|A/-|frameshift_variant;SENP6|p.I864*|1|0.21|ENSG00000112701|chr6:75702940-75702940|A/-|frameshift_variant	76.16968421966216	0.11411088698345859	2				NaN	NaN	0	NaN	4527	3016	7539
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7546	22.986	NaN	7272.8	30	0	1432.1	0.035			+	31904	QQHTLPIGL	9	68	503.7875097465823	1005.5604665599647	2	503.7874755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QQHTLPIGL_	REV__FAM186A|p.P1269H|1|0.37|ENSG00000185958|chr12:50353026-50353026|G/T|missense_variant	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	4528	3016	7539
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7558	23.012	NaN	14159	30	0	1578.8	0.214	+			36075	SEKDHMVTM	9	77	539.2389053639081	1076.463257794616	2	539.2396850585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEKDHMVTM_	ENSG00000130826|ENST00000369550|DKC1;nc|ENSG00000130826|O60832-2|DKC1	107.00750918261382	0.032051501805654005	2				NaN	NaN	0	NaN	4537	3019	7557
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7559	23.015	NaN	8872.6	30	0	970.29	0.106	+			5342	ATVRPPVAVK	10	75	519.3270693719411	1036.639585810682	2	519.32763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATVRPPVAVK_	COL6A3|p.A2956Lfs*45|1|0.33|ENSG00000163359|chr2:237336234-237336234|C/-|frameshift_variant;COL6A3|p.A2957Lfs*44|1|0.33|ENSG00000163359|chr2:237336232-237336232|A/-|frameshift_variant;COL6A3|p.G3016Vfs*19|1|0.34|ENSG00000163359|chr2:237334810-237334810|G/-|frameshift_variant;ENSG00000163359|ENST00000295550|COL6A3;ENST00000491769.1_1_2:238233419-238250825:-|nuORF;nc|ENSG00000163359|P12111-2|COL6A3;nc|ENSG00000163359|P12111-4|COL6A3	94.4091291819064	0.10583072883246657	2				NaN	NaN	0	NaN	4538	3019	7557
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7560	23.018	NaN	4379.7	30	0	738.55	0.106	+			5974	AVLPPHLGGAG	11	82	330.1904950878578	987.5496558637735	3	330.1907043457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVLPPHLGGAG_	ENST00000334370.8_1_19:42875618-42879777:+|nuORF	33.921630207806714	0.6339809607503234	2				NaN	NaN	0	NaN	4539	3019	7557
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7561	23.019	NaN	11246	30	0	1433.5	0.106	+			5397	ATYGDTINR	9	75	505.74869524491316	1009.4828375566264	2	505.7488098144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATYGDTINR_	ENSG00000071189|ENST00000428135|SNX13;nc|ENSG00000071189|Q9Y5W8|SNX13;SNX13|p.E913Qfs*13|1|0.04|ENSG00000071189|chr7:17794182-17794183|-/TTTG|frameshift_variant;SNX13|p.F895Lfs*9|1|0.23|ENSG00000071189|chr7:17794234-17794234|A/-|frameshift_variant;SNX13|p.F911Wfs*5|1|0.02|ENSG00000071189|chr7:17794184-17794187|AAGA/-|frameshift_variant	115.49404669440601	0.023927554121326553	2				NaN	NaN	0	NaN	4540	3019	7557
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7562	23.021	NaN	9977.7	30	0	1961.3	0.106			+	20512	KFHSLFKPN	9	75	559.3113397929748	1116.6081266527494	2	559.311767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KFHSLFKPN_	REV__ENSG00000177731|ENST00000327031|FLII;REV__ENST00000578101.5_1_17:18148454-18160363:-|nuORF;REV__ENST00000580966.1_1_17:18149569-18150009:-|nuORF;REV__nc|ENSG00000177731|Q13045-2|FLII;REV__nc|ENSG00000177731|Q13045-3|FLII	53.351449002276354	0.2690372970092375	2				NaN	NaN	0	NaN	4541	3019	7557
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7563	23.023	NaN	9616.7	30	0	1719.8	0.106			+	17593	IEESKFIWQ	9	76	611.3100827166015	1220.605612500003	2	611.3101806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))IEESKFIWQ_	REV__ENST00000470197.5_1_2:75923388-75923421:-|nuORF	71.87747018426188	0.13267044672804276	2				NaN	NaN	0	NaN	4542	3019	7557
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7564	23.025	NaN	14585	30	0	1958.9	0.035	+			5082	ATSLVFKQK	9	78	511.3056504783617	1020.5967480235234	2	511.305908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATSLVFKQK_	ENSG00000227345|ENST00000616448|PARG;PARG|p.D904Tfs*4|1|0.16|ENSG00000227345|chr10:49820231-49820231|C/-|frameshift_variant;PARG|p.N277Mfs*5|3|0.4|ENSG00000227345|chr10:49933618-49933618|T/-|frameshift_variant	129.42129120953632	0.01549634589885217	2				NaN	NaN	0	NaN	4543	3019	7557
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7579	23.056	NaN	13050	30	0	3383.1	0.214			+	42397	TAIVSFGKKA	10	59	341.2060609038406	1020.5963533117217	3	341.2060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAIVSFGKKA_	REV__tr|U7SLX9|U7SLX9_FUSNUATPasedynein-relatedAAAdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01982PE=4SV=1	23.04248740728303	0.69165701907106	2				NaN	NaN	0	NaN	4555	3022	7578
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7580	23.06	NaN	11435	30	0	4617	0.106	+			42595	TATATNHVL	9	68	464.2485234688414	926.4824940044829	2	464.24798583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TATATNHVL_	ENSG00000004700|ENST00000444129|RECQL	107.00750918261382	0.032051501805654005	2				NaN	NaN	0	NaN	4556	3022	7578
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7581	23.062	NaN	19740	30	0	7688.8	0.106			+	31598	QLTRLSVGPV	10	72	535.32183145732	1068.6291099814398	2	535.3219604492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QLTRLSVGPV_	REV__ENSG00000116176|ENST00000234798|TPSG1	45.97224482568171	0.49411383603842696	2				NaN	NaN	0	NaN	4557	3022	7578
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7582	23.064	NaN	12077	30	0	2491.8	0.106	+			12340	GDKGRLCLQK	10	76	373.2096122107544	1116.6070072324633	3	373.2098083496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GDKGRLCLQK_	AluSc_dup13832|chr7:33006087-33006413:-|3.3176111198493|0.4159080058002372|3.0|482.0|7|2|sense	42.33807565288922	0.5276008846745733	2				NaN	NaN	0	NaN	4558	3022	7578
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7583	23.066	NaN	11540	30	0	3438.9	0.106			+	10437	EVLAAMRAAE	10	77	530.7755004678213	1059.5364480024425	2	530.7745971679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EVLAAMRAAE_	REV__ENSG00000178104|ENST00000695795|PDE4DIP;REV__ENST00000477941.2_1_1:144952199-144955307:-|nuORF;REV__nc|ENSG00000178104|Q5VU43-10|PDE4DIP;REV__nc|ENSG00000178104|Q5VU43-11|PDE4DIP;REV__nc|ENSG00000178104|Q5VU43-12|PDE4DIP;REV__nc|ENSG00000178104|Q5VU43-3|PDE4DIP;REV__nc|ENSG00000178104|Q5VU43-4|PDE4DIP;REV__nc|ENSG00000178104|Q5VU43-6|PDE4DIP;REV__nc|ENSG00000178104|Q5VU43-7|PDE4DIP;REV__nc|ENSG00000178104|Q5VU43-8|PDE4DIP;REV__nc|ENSG00000178104|Q5VU43-9|PDE4DIP;REV__nc|ENSG00000178104|Q5VU43|PDE4DIP;REV__PDE4DIP|p.E1085Ffs*6|1|0.06|ENSG00000178104|chr1:149001704-149001705|-/GTTCC|frameshift_variant;REV__PDE4DIP|p.V841Lfs*4|1|0.41|ENSG00000178104|chr1:148978357-148978357|A/-|frameshift_variant	44.377184641726394	0.5088115166961078	2				NaN	NaN	0	NaN	4559	3022	7578
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7584	23.067	NaN	8980.6	30	0	4223.6	0.033	+			30279	PTGLEPRQ	8	64	449.2432761328764	896.4719993325529	2	449.24267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PTGLEPRQ_	ENST00000476941.5_1_3:142442973-142443402:+|nuORF	66.42927471994793	0.4381325844043345	2				NaN	NaN	0	NaN	4560	3022	7578
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7585	23.068	NaN	5820.7	30	0	1488.8	0.139	+			21602	KPKNEFAE	8	59	481.7512552461872	961.4879575591744	2	481.7521057128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KPKNEFAE_	ENSG00000113597|ENST00000399438|TRAPPC13;ENST00000512009.5_1_5:64920875-64956772:+|nuORF;nc|ENSG00000113597|A5PLN9-2|TRAPPC13;nc|ENSG00000113597|A5PLN9-4|TRAPPC13;nc|ENSG00000113597|A5PLN9-5|TRAPPC13;nc|ENSG00000113597|A5PLN9-7|TRAPPC13	51.33545320467046	0.5859736979383976	2				NaN	NaN	0	NaN	4561	3022	7578
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7600	23.1	NaN	64317	30	0	12888	0.201	+			4878	ATQCGSLIGK	10	105	517.7687168889536	1033.522880844707	2	517.7692260742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_ATQC(Carbamidomethyl (C))GSLIGK_	ENSG00000169564|ENST00000303577|PCBP1	174.8648734531126	0.002138720898421076	2				NaN	NaN	0	NaN	4573	3025	7599
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7601	23.104	NaN	125800	30	0	17555	0.106	+			36062	SEIVREFK	8	131	336.5220089765038	1006.5441975297115	3	336.52239990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEIVREFK_	ENSG00000102038|ENST00000371121|SMARCA1;ENSG00000153147|ENST00000283131|SMARCA5;nc|ENSG00000102038|P28370-2|SMARCA1;nc|ENSG00000102038|P28370|SMARCA1;SMARCA1|p.K851Nfs*33|1|0.67|ENSG00000102038|chrX:129471216-129471216|T/-|frameshift_variant;SMARCA1|p.M710Wfs*6|1|0.37|ENSG00000102038|chrX:129487107-129487107|T/-|frameshift_variant;SMARCA1|p.N376Ifs*16|1|0.37|ENSG00000102038|chrX:129504774-129504774|T/-|frameshift_variant	44.116797842482775	0.6307669463330267	2				NaN	NaN	0	NaN	4574	3025	7599
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7602	23.106	NaN	42449	30	0	2794.3	0.106			+	10565	EYEVIRAK	8	103	504.27960794714306	1006.5446629610861	2	504.2806701660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EYEVIRAK_	REV__ENSG00000167863|ENST00000301587|ATP5PD;REV__ENST00000580649.1_1_17:73035029-73035402:-|nuORF;REV__nc|ENSG00000167863|O75947-2|ATP5PD	44.116797842482775	0.6307669463330267	2				NaN	NaN	0	NaN	4575	3025	7599
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7603	23.108	NaN	9508.8	30	0	1257.1	0.106	+			39208	STADLIRCK	9	74	532.2815858368281	1062.548618740456	2	532.28271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_STADLIRC(Carbamidomethyl (C))K_	ENSG00000001497|ENST00000374811|LAS1L;nc|ENSG00000001497|Q9Y4W2-2|LAS1L;nc|ENSG00000001497|Q9Y4W2-4|LAS1L	112.41091882917199	0.026537921851008135	2				NaN	NaN	0	NaN	4576	3025	7599
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7604	23.11	NaN	32291	30	0	14144	0.106	+			37639	SLQLIKRL	8	82	324.2182182953359	969.6328254862076	3	324.2185363769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SLQLIKRL_	ENSG00000010810|ENST00000354650|FYN;ENST00000495935.1_1_6:112021235-112021421:-|nuORF;FYN|p.D506Gfs*3|1|0.19|ENSG00000010810|chr6:111661838-111661839|-/T|frameshift_variant	30.503639358989545	0.7238069182250283	2				NaN	NaN	0	NaN	4577	3025	7599
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7605	23.111	NaN	3592.4	30	0	1189.5	0.106				-1	 	0	55	328.7093836793952	655.4042144255905	2	328.70953369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4578	3025	7599
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7606	23.113	NaN	10350	30	0	967.78	0.036	+			6327	AVTEYIQRK	9	81	554.3123302939712	NaN	0	554.3125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AVTEYIQRK_	ENSG00000165140|ENST00000375326|FBP1;FBP1|p.G294Efs*11|1|0.11|ENSG00000165140|chr9:94603517-94603517|C/-|frameshift_variant	110.11987700582712	0.00958887139988123	2				NaN	NaN	0	NaN	4579	3025	7599
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7618	23.139	NaN	75948	30	0	10699	0.211	+			39475	STFDTQITKK	10	102	584.814073160722	1167.613593388244	2	584.814208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STFDTQITKK_	ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC;PRKDC|p.D2437Wfs*3|1|0.11|ENSG00000253729|chr8:47840161-47840162|-/CA|frameshift_variant;PRKDC|p.K3681Nfs*6|1|0.32|ENSG00000253729|chr8:47785174-47785177|TTCT/-|frameshift_variant;PRKDC|p.M3670*|1|0.5|ENSG00000253729|chr8:47785212-47785212|T/-|frameshift_variant;PRKDC|p.M3846Cfs*12|1|0.13|ENSG00000253729|chr8:47779047-47779047|T/-|frameshift_variant;PRKDC|p.M4020Cfs*2|1|0.31|ENSG00000253729|chr8:47776968-47776968|T/-|frameshift_variant;PRKDC|p.N3605Kfs*3|1|0.22|ENSG00000253729|chr8:47788993-47788994|-/T|frameshift_variant;PRKDC|p.N4037Ifs*15|1|0.17|ENSG00000253729|chr8:47776916-47776916|T/-|frameshift_variant;PRKDC|p.R2704Gfs*13|2|0.34|ENSG00000253729|chr8:47834238-47834238|T/-|frameshift_variant;PRKDC|p.S3402Ifs*16|1|0.04|ENSG00000253729|chr8:47799302-47799303|-/AAACCGTGAGTTAGAGGAGGTAA|frameshift_variant;PRKDC|p.S4099Qfs*6|1|0.25|ENSG00000253729|chr8:47774265-47774265|A/-|frameshift_variant;PRKDC|p.T3268Pfs*7|1|0.5|ENSG00000253729|chr8:47803426-47803426|T/-|frameshift_variant;PRKDC|p.W3401Cfs*4|1|0.01|ENSG00000253729|chr8:47799304-47799305|-/AATGAATA|frameshift_variant	195.82877817392193	6.6336511456275775E-06	2				NaN	NaN	0	NaN	4588	3028	7617
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7619	23.142	NaN	21912	30	0	2825.1	0.106	+			14838	GTLMGSGLRK	10	86	510.286766706282	1018.558980479364	2	510.28668212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTLMGSGLRK_	ABCB8|p.G460Afs*31|1|0.34|ENSG00000197150|chr7:151040570-151040570|G/-|frameshift_variant;ENSG00000197150|ENST00000358849|ABCB8;ENST00000466514.5_1_7:150731570-150742433:+|nuORF;nc|ENSG00000197150|Q9NUT2-3|ABCB8;nc|ENSG00000197150|Q9NUT2-4|ABCB8;nc|ENSG00000197150|Q9NUT2-5|ABCB8;nc|ENSG00000197150|Q9NUT2|ABCB8	109.47833844074708	0.04954876308859735	2				NaN	NaN	0	NaN	4589	3028	7617
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7620	23.144	NaN	18257	30	0	1858.8	0.106			+	30869	QEITEQKEL	9	80	559.2900754356882	1116.5655979381763	2	559.2904052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QEITEQKEL_	REV__ENSG00000105063|ENST00000412770|PPP6R1	129.42129120953632	0.01549634589885217	2				NaN	NaN	0	NaN	4590	3028	7617
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7621	23.146	NaN	13107	30	0	2919.9	0.106	+			30334	PTSPIRVK	8	71	449.27942907875774	896.5443052243155	2	449.2791748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PTSPIRVK_	ENSG00000196924|ENST00000369850|FLNA;FLNA|p.A1026Lfs*20|1|0.42|ENSG00000196924|chrX:154361439-154361439|C/-|frameshift_variant;FLNA|p.G2237Efs*109|1|0.28|ENSG00000196924|chrX:154352240-154352240|C/-|frameshift_variant;FLNA|p.Q1716Sfs*23|2|0.38|ENSG00000196924|chrX:154354896-154354896|G/-|frameshift_variant;FLNA|p.R2520Vfs*16|1|0.7|ENSG00000196924|chrX:154349560-154349560|G/-|frameshift_variant;nc|ENSG00000196924|P21333-2|FLNA	62.107414245175825	0.4809183816468817	2				NaN	NaN	0	NaN	4591	3028	7617
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7622	23.148	NaN	10292	30	0	2230.4	0.106	+			19961	KEGKPPISV	9	66	477.78449766667757	953.5544424001552	2	477.7841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEGKPPISV_	ENSG00000072958|ENST00000291439|AP1M1;nc|ENSG00000072958|Q9BXS5-2|AP1M1	90.60085204095205	0.06317133949006545	2				NaN	NaN	0	NaN	4592	3028	7617
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7623	23.15	NaN	9841.3	30	0	6543.4	0.106	+			1590	AGKTNIIGA	9	64	422.7482044031102	843.4818558730204	2	422.74774169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AGKTNIIGA_	tr|U7T498|U7T498_FUSNUATPaseAAA-typecoredomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00307PE=4SV=1	54.776311868738084	0.25715957988447635	2				NaN	NaN	0	NaN	4593	3028	7617
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7624	23.152	NaN	15939	30	0	5649.1	0.034	+			45896	VAPSTVKEV	9	74	465.2684119280026	928.5222709228052	2	465.2684631347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VAPSTVKEV_	ENSG00000047849|ENST00000683076|MAP4;MAP4|p.G501D|1|0.04|ENSG00000047849|chr3:47916325-47916325|C/T|missense_variant;MAP4|p.R919Gfs*14|1|0.44|ENSG00000047849|chr3:47870917-47870917|G/-|frameshift_variant;MAP4|p.T960Qfs*35|1|0.3|ENSG00000047849|chr3:47869309-47869309|T/-|frameshift_variant;MAP4|p.V999*|1|0.25|ENSG00000047849|chr3:47867318-47867318|T/-|frameshift_variant;nc|ENSG00000047849|P27816-2|MAP4;nc|ENSG00000047849|P27816-6|MAP4;nc|ENSG00000047849|P27816|MAP4	75.04331003522576	0.118981335847003	2				NaN	NaN	0	NaN	4594	3028	7617
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7641	23.186	NaN	15556	30	0	6250.6	0.214	+			14238	GSSSSTFIK	9	69	457.23493100939027	912.4553090855806	2	457.2345886230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSSSSTFIK_	ENSG00000134853|ENST00000257290|PDGFRA	54.722347961057174	0.257609425301511	2				NaN	NaN	0	NaN	4608	3031	7640
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7642	23.189	NaN	9563.1	30	0	4819.1	0.106	+			29742	PHQASPTL	8	61	425.7245552650588	849.4345575969177	2	425.72430419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PHQASPTL_	ENST00000532354.1_1_11:6340395-6341123:-|nuORF	47.91560031466742	0.6071945918984287	2				NaN	NaN	0	NaN	4609	3031	7640
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7643	23.192	NaN	7971.3	30	0	868.42	0.106	+			46646	VGDPGQRTL	9	64	471.7535850319347	NaN	0	471.7534484863281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VGDPGQRTL_	ARID1A|p.F2141Sfs*59|5|0.26|ENSG00000117713|chr1:26780313-26780313|C/-|frameshift_variant;ARID1A|p.P2114Rfs*21|1|0.46|ENSG00000117713|chr1:26780236-26780236|C/-|frameshift_variant;ARID1A|p.V2244Gfs*34|1|0.31|ENSG00000117713|chr1:26780626-26780627|-/G|frameshift_variant;ENSG00000117713|ENST00000324856|ARID1A;nc|ENSG00000117713|O14497-2|ARID1A;nc|ENSG00000117713|O14497-3|ARID1A	68.84614121027924	0.11159004992091766	2				NaN	NaN	0	NaN	4610	3031	7640
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7644	23.193	NaN	6490	30	0	1075.7	0.106			+	28580	NKKDQTSDVSA	11	58	596.7933117807248	1191.5720706282495	2	596.79345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NKKDQTSDVSA_	REV__ENSG00000167522|ENST00000301030|ANKRD11;REV__ENST00000330736.9_1_16:89334888-89371640:-|nuORF	27.047317107675042	0.7060868989289394	2				NaN	NaN	0	NaN	4611	3031	7640
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7645	23.195	NaN	6778.2	30	0	1448.7	0.106	+			41032	SVIDDRLKEK	10	66	601.8408203125	NaN	0	601.8408203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVIDDRLKEK_	ENSG00000159720|ENST00000290949|ATP6V0D1;ENST00000561658.5_1_16:67486328-67515058:-|nuORF	65.2775769800794	0.19118069291481515	2				NaN	NaN	0	NaN	4612	3031	7640
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7646	23.197	NaN	6235	30	0	994.88	0.039			+	-1	VHVMFACGSCV	11	64	633.7741088867188	NaN	0	633.7741088867188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Carbamidomethyl (C)	_VHVMFAC(Carbamidomethyl (C))GSC(Carbamidomethyl (C))V_	REV__COG3|p.R367C|1|0.12|ENSG00000136152|chr13:45492162-45492162|C/T|missense_variant	27.882242232435846	0.44115667141176046	2				NaN	NaN	0	NaN	4613	3031	7640
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7647	23.198	NaN	7069.9	30	0	1358.3	0.142			+	40681	SVASQSSMACR	11	68	563.7551391855203	1125.4957254378405	2	563.7564086914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVASQSSMACR_	REV__ENST00000589805.1_1_17:42275437-42276541:-|nuORF;REV__ENST00000590169.5_1_17:42275437-42275799:-|nuORF	47.95952297671804	0.44903247279694136	2				NaN	NaN	0	NaN	4614	3031	7640
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7660	23.227	NaN	16940	30	0	2702	0.214	+			3587	ASVGYAVTK	9	79	448.2478733395711	894.4811937459422	2	448.2477111816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASVGYAVTK_	ENSG00000180198|ENST00000683442|RCC1;nc|ENSG00000180198|P18754-2|RCC1	131.61620852596164	0.014413238321579053	2				NaN	NaN	0	NaN	4624	3034	7659
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7661	23.231	NaN	20036	30	0	1952	0.106	+			41618	SVQLSITKK	9	88	502.31087904019245	1002.6072051471849	2	502.31085205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVQLSITKK_	ENST00000415531.5_1_1:35496252-35497220:-|nuORF	112.10723106719422	0.02684780151337622	2				NaN	NaN	0	NaN	4625	3034	7659
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7662	23.233	NaN	19062	30	0	3711.1	0.106			+	37522	SLLPDPSLPA	10	80	505.28336765555804	1008.5521823779161	2	505.78515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLLPDPSLPA_	REV__ENSG00000063176|ENST00000245222|SPHK2;REV__nc|ENSG00000063176|Q9NRA0-2|SPHK2;REV__nc|ENSG00000063176|Q9NRA0-3|SPHK2;REV__nc|ENSG00000063176|Q9NRA0-4|SPHK2;REV__nc|ENSG00000063176|Q9NRA0-5|SPHK2;REV__SPHK2|p.V492*|1|0.22|ENSG00000063176|chr19:48629277-48629277|C/-|frameshift_variant	56.72105179125745	0.3956618550748046	2				NaN	NaN	0	NaN	4626	3034	7659
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7663	23.235	NaN	16727	30	0	2796.8	0.106				-1	 	0	82	323.20134355080654	644.3881341684131	2	323.2015075683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4627	3034	7659
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7664	23.236	NaN	30359	30	0	5225.8	0.106	+			36782	SIASNVVKIIL	11	86	386.248107163231	1155.722492089893	3	386.2481994628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SIASNVVKIIL_	ENSG00000187701|ENST00000460972|OR2T27;nc|ENSG00000227152|P0C7T2|OR2T7	41.42661286455405	0.5384226294179143	2				NaN	NaN	0	NaN	4628	3034	7659
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7665	23.238	NaN	12808	30	0	2587.3	0.106	+			36012	SEIERQAQV	9	84	530.2755264797486	NaN	0	530.2757568359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SEIERQAQV_	ENSG00000149182|ENST00000524782|ARFGAP2;ENST00000395449.7_1_11:47187835-47198404:-|nuORF;nc|ENSG00000149182|Q8N6H7-2|ARFGAP2	88.17693792209575	0.04527150213038833	2				NaN	NaN	0	NaN	4629	3034	7659
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7666	23.24	NaN	19654	30	0	8598.5	0.036	+			32407	QVFEGHTHY	9	78	559.2562721258579	NaN	0	559.2572021484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QVFEGHTHY_	ENSG00000184432|ENST00000333188|COPB2;ENST00000510181.5_1_3:139093277-139108392:-|nuORF;nc|ENSG00000184432|P35606-2|COPB2	84.9155231211612	0.05454024040755679	2				NaN	NaN	0	NaN	4630	3034	7659
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7680	23.27	NaN	113840	30	0	20922	0.214	+			17647	IEKFDKSKL	9	114	369.8850683019955	1106.6333755061864	3	369.88507080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IEKFDKSKL_	ENSG00000154620|ENST00000284856|TMSB4Y;ENSG00000205542|ENST00000451311|TMSB4X;ENST00000323496.5_1_9:131104444-131104642:+|nuORF;TMSB4X|p.A8V|1|0.09|ENSG00000205542|chrX:12976284-12976284|C/T|missense_variant	66.96192283764107	0.15557981141143568	2				NaN	NaN	0	NaN	4641	3037	7679
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7681	23.273	NaN	77492	30	0	13612	0.106	+			17648	IEKFDKSKL	9	98	554.3242364489399	1106.6339199646798	2	554.324462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IEKFDKSKL_	ENSG00000154620|ENST00000284856|TMSB4Y;ENSG00000205542|ENST00000451311|TMSB4X;ENST00000323496.5_1_9:131104444-131104642:+|nuORF;TMSB4X|p.A8V|1|0.09|ENSG00000205542|chrX:12976284-12976284|C/T|missense_variant	136.48854661914896	0.012127429220575699	2				NaN	NaN	0	NaN	4642	3037	7679
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7682	23.276	NaN	18095	30	0	2179.5	0.106	+			44625	TTFELSSRK	9	80	534.7880590001973	1067.5615650671946	2	534.7880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TTFELSSRK_	ENSG00000075539|ENST00000358350|FRYL;FRYL|p.K2264Qfs*11|1|0.13|ENSG00000075539|chr4:48531269-48531270|-/G|frameshift_variant;FRYL|p.L330*|1|0.33|ENSG00000075539|chr4:48602066-48602066|A/-|frameshift_variant;FRYL|p.L330Ffs*3|1|0.35|ENSG00000075539|chr4:48602065-48602066|-/A|frameshift_variant;FRYL|p.P2464Efs*13|1|0.04|ENSG00000075539|chr4:48523032-48523033|-/TATACAATTC|frameshift_variant	82.7504851949679	0.08565546331141553	2				NaN	NaN	0	NaN	4643	3037	7679
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7683	23.277	NaN	17139	30	0	2936.4	0.106	+			46992	VKSAQKRALR	10	90	578.8687933001985	NaN	0	578.8687133789062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VKSAQKRALR_	ENST00000463814.1_1_7:143815556-143816108:-|nuORF	58.62960593111931	0.24546904353716886	2				NaN	NaN	0	NaN	4644	3037	7679
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7684	23.279	NaN	9696.7	30	0	1322.2	0.106	+			14159	GSNAFISQK	9	73	476.248427574352	950.482302215504	2	476.2481384277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GSNAFISQK_	ENSG00000129315|ENST00000261900|CCNT1	83.6470233535746	0.08277643980271215	2				NaN	NaN	0	NaN	4645	3037	7679
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7685	23.281	NaN	10946	30	0	1266.1	0.038			+	35744	SDSNESQIPKT	11	87	603.285028709677	1204.555504486154	2	602.836181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SDSNESQIPKT_	REV__ANKRD12|p.D1018Rfs*2|1|0.34|ENSG00000101745|chr18:9256313-9256314|-/A|frameshift_variant;REV__ANKRD12|p.D530Kfs*23|1|0.42|ENSG00000101745|chr18:9254849-9254850|-/AAGAT|frameshift_variant;REV__ANKRD12|p.I1846*|1|0.43|ENSG00000101745|chr18:9258797-9258797|A/-|frameshift_variant;REV__ANKRD12|p.I94Nfs*25|1|0.08|ENSG00000101745|chr18:9204519-9204520|-/A|frameshift_variant;REV__ANKRD12|p.K652Nfs*4|1|0.09|ENSG00000101745|chr18:9255217-9255217|A/-|frameshift_variant;REV__ANKRD12|p.K983Nfs*4|1|0.36|ENSG00000101745|chr18:9256209-9256209|A/-|frameshift_variant;REV__ANKRD12|p.L711Kfs*5|1|0.41|ENSG00000101745|chr18:9255395-9255396|TT/-|frameshift_variant;REV__ANKRD12|p.N1526Kfs*7|2|0.18|ENSG00000101745|chr18:9257837-9257838|-/A|frameshift_variant;REV__ANKRD12|p.S984Ifs*7|1|0.2|ENSG00000101745|chr18:9256208-9256209|-/A|frameshift_variant;REV__ENSG00000101745|ENST00000262126|ANKRD12;REV__ENST00000540578.6_1_18:9182415-9235682:+|nuORF;REV__ENST00000581758.1_1_18:9182415-9208777:+|nuORF;REV__nc|ENSG00000101745|Q6UB98-2|ANKRD12	43.650786325866115	0.5079891456189096	2				NaN	NaN	0	NaN	4646	3037	7679
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7686	23.282	NaN	9383.8	30	0	838.17	0.142				-1	TNEEPLPKK	9	74	549.2955472741139	1096.5765416150277	2	549.2958374023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))TNEEPLPKK_	ENSG00000146457|ENST00000621533|WTAP;ENST00000494513.1_1_6:160148641-160157384:+|nuORF;nc|ENSG00000146457|Q15007-2|WTAP	61.691277971877994	0.19951612995419254	2				NaN	NaN	0	NaN	4647	3037	7679
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7703	23.318	NaN	82623	30	0	12361	0.197	+			12919	GESHVSGTTTL	11	94	544.7647847671632	1087.5150166011263	2	544.7650756835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GESHVSGTTTL_	ENSG00000124422|ENST00000261497|USP22;ENST00000478443.1_1_17:20910195-20914666:-|nuORF;nc|ENSG00000124422|Q9UPT9-2|USP22	93.1432384553994	0.08590712355761482	2				NaN	NaN	0	NaN	4661	3040	7702
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7704	23.321	NaN	52416	30	0	9931.7	0.106	+			4503	ATITKVLQK	9	101	501.3212870038698	1000.6280210745397	2	501.32098388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATITKVLQK_	ENSG00000130589|ENST00000467148|HELZ2;HELZ2|p.D1312G|1|0.12|ENSG00000130589|chr20:63564887-63564887|T/C|missense_variant;HELZ2|p.G2213Vfs*22|1|0.14|ENSG00000130589|chr20:63561876-63561876|C/-|frameshift_variant;HELZ2|p.R2206Vfs*29|2|0.28|ENSG00000130589|chr20:63561898-63561898|G/-|frameshift_variant;nc|ENSG00000130589|Q9BYK8-2|HELZ2;nc|ENSG00000130589|Q9BYK8|HELZ2	180.86945649972546	0.001208757763874378	2				NaN	NaN	0	NaN	4662	3040	7702
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7705	23.323	NaN	87563	30	0	22818	0.106	+			43211	TEVKKIYKL	9	101	561.3501389516391	1120.6857249700781	2	561.3505249023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TEVKKIYKL_	ENSG00000144034|ENST00000272424|TPRKB;nc|ENSG00000144034|Q9Y3C4-2|TPRKB;nc|ENSG00000144034|Q9Y3C4-3|TPRKB	112.10723106719422	0.02684780151337622	2				NaN	NaN	0	NaN	4663	3040	7702
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7706	23.325	NaN	27534	30	0	3425.1	0.106	+			12521	GEFEKKYVA	9	85	535.7796701631563	1069.5447873931125	2	535.7796630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEFEKKYVA_	ENSG00000132341|ENST00000543796|RAN	104.0567914643314	0.03506238181059741	2				NaN	NaN	0	NaN	4664	3040	7702
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7707	23.327	NaN	12332	30	0	4970.3	0.106			+	40864	SVFEFLSNK	9	73	357.5219141271432	1069.5439129816295	3	357.5220947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVFEFLSNK_	REV__ENSG00000125046|ENST00000544814|SSUH2;REV__ENST00000413305.5_1_3:8661556-8676112:-|nuORF;REV__ENST00000420394.5_1_3:8661556-8693727:-|nuORF;REV__nc|ENSG00000125046|Q9Y2M2-1|SSUH2;REV__nc|ENSG00000125046|Q9Y2M2-3|SSUH2	35.61828744233558	0.47037581924408073	2				NaN	NaN	0	NaN	4665	3040	7702
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7708	23.328	NaN	19374	30	0	4872.3	0.106	+			32109	QSIEEREKL	9	85	566.3033208785564	1130.5920888239127	2	566.3034057617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QSIEEREKL_	ENSG00000117118|ENST00000375499|SDHB;ENST00000475506.1_1_1:17354162-17371284:-|nuORF	112.41091882917199	0.026537921851008135	2				NaN	NaN	0	NaN	4666	3040	7702
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7709	23.33	NaN	16494	30	0	6301.9	0.035	+			17301	IADSGKYIK	9	77	497.7817585866589	993.5489642401178	2	497.78173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IADSGKYIK_	ENSG00000159593|ENST00000290810|NAE1;nc|ENSG00000159593|Q13564-2|NAE1;nc|ENSG00000159593|Q13564-3|NAE1;nc|ENSG00000159593|Q13564-4|NAE1	71.87747018426188	0.13267044672804276	2				NaN	NaN	0	NaN	4667	3040	7702
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7724	23.362	NaN	13041	30	0	1871.9	0.214	+			2175	ALMGYATHK	9	79	496.25509317483727	990.4956334164746	2	496.2550048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ALMGYATHK_	ENSG00000126709|ENST00000361157|IFI6;nc|ENSG00000126709|P09912-2|IFI6;nc|ENSG00000126709|P09912-3|IFI6	101.60071028292904	0.0375685401170269	2				NaN	NaN	0	NaN	4679	3043	7723
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7725	23.365	NaN	11634	30	0	1112.3	0.106	+			19752	KDVNQQEF	8	74	504.24340300547175	1006.4722530777435	2	504.2433166503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KDVNQQEF_	ENSG00000105372|ENST00000598742|RPS19	134.7655990226056	0.23878583144935747	2				NaN	NaN	0	NaN	4680	3043	7723
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7726	23.368	NaN	7872.7	30	0	739.79	0.106	+			1278	AESKGVVKF	9	76	482.77638148478337	963.5382100363668	2	482.77667236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AESKGVVKF_	ENSG00000064651|ENST00000262461|SLC12A2;nc|ENSG00000064651|P55011-3|SLC12A2;SLC12A2|p.E1119Rfs*7|1|0.47|ENSG00000064651|chr5:128184417-128184418|-/A|frameshift_variant;SLC12A2|p.F466Lfs*59|1|0.11|ENSG00000064651|chr5:128135793-128135793|T/-|frameshift_variant;SLC12A2|p.P1171Sfs*18|1|0.38|ENSG00000064651|chr5:128186498-128186499|-/TC|frameshift_variant	75.04331003522576	0.118981335847003	2				NaN	NaN	0	NaN	4681	3043	7723
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7727	23.369	NaN	17342	30	0	2208.9	0.106	+			37202	SKEIIIQK	8	70	479.8000659772841	957.5855790213682	2	479.8000793457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SKEIIIQK_	ENSG00000189325|ENST00000437635|BNIP5	162.25246889848123	0.0741621453821622	2				NaN	NaN	0	NaN	4682	3043	7723
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7728	23.371	NaN	12906	30	0	2296.8	0.106				-1	 	0	73	336.5340769935905	1006.5804015809715	3	336.53436279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4683	3043	7723
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7729	23.373	NaN	5703.4	30	0	1668.3	0.032				-1	 	0	61	384.7720451196625	767.529537306125	2	384.7719421386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4684	3043	7723
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7730	23.373	NaN	14515	30	0	1935	0.142	+			50672	YEEEVKKTL	9	80	380.20444082036204	1137.5914930612862	3	380.2045593261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YEEEVKKTL_	ECHDC1|p.N109Ifs*9|1|0.19|ENSG00000093144|chr6:127327057-127327057|T/-|frameshift_variant;ECHDC1|p.N222Mfs*3|1|0.46|ENSG00000093144|chr6:127290128-127290128|T/-|frameshift_variant;ENSG00000093144|ENST00000454859|ECHDC1;ENST00000368287.1_1_6:127648134-127664493:-|nuORF;nc|ENSG00000093144|Q9NTX5-5|ECHDC1;nc|ENSG00000093144|Q9NTX5-6|ECHDC1;nc|ENSG00000093144|Q9NTX5|ECHDC1	40.05817265558897	0.419577045485086	2				NaN	NaN	0	NaN	4685	3043	7723
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7747	23.411	NaN	94328	30	0	33797	0.182	+			18841	IVAGTLTNK	9	69	458.7767404977141	915.5389280622283	2	458.77642822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IVAGTLTNK_	DAZAP1-NDUFS7|1|fusion;ENSG00000115286|ENST00000233627|NDUFS7;ENST00000436115.6_1_19:1390815-1393403:+|nuORF;ENST00000538523.5_1_19:1387763-1393403:+|nuORF;ENST00000538662.5_1_19:1383907-1391085:+|nuORF;ENST00000543289.5_1_19:1388688-1391085:+|nuORF;ENST00000545446.5_1_19:1388688-1393403:+|nuORF;nc|ENSG00000115286|O75251-2|NDUFS7	167.22876102047192	0.0032399547248545047	2				NaN	NaN	0	NaN	4699	3046	7746
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7748	23.414	NaN	37832	30	0	3025	0.106	+			14542	GTEEAPKVFK	10	90	553.2984768193863	1104.5824007055726	2	553.2984619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTEEAPKVFK_	ENSG00000171204|ENST00000358867|TMEM126B;nc|ENSG00000171204|Q8IUX1-2|TMEM126B;nc|ENSG00000171204|Q8IUX1-4|TMEM126B;TMEM126B|p.N60Kfs*3|1|0.37|ENSG00000171204|chr11:85631777-85631778|-/A|frameshift_variant	154.1183686248401	0.007764289751102599	2				NaN	NaN	0	NaN	4700	3046	7746
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7749	23.416	NaN	42855	30	0	17885	0.106	+			9096	EGKFKDTLH	9	82	358.85726360071874	1073.5499614023563	3	358.8574523925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EGKFKDTLH_	ENSG00000243772|ENST00000342376|KIR2DL3;nc|ENSG00000243772|P43628-2|KIR2DL3	30.503639358989545	0.5181749237905803	2				NaN	NaN	0	NaN	4701	3046	7746
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7750	23.418	NaN	9818.4	30	0	1517.5	0.106			+	20368	KESSKRRW	8	78	538.8008292321275	1075.587105531055	2	538.8013305664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KESSKRRW_	REV__ENST00000495183.5_1_6:29910749-29913287:+|nuORF	79.45101966838831	0.3281480470254892	2				NaN	NaN	0	NaN	4702	3046	7746
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7751	23.419	NaN	8653.6	30	0	1510.9	0.106	+			23539	LAKAYKTSI	9	78	497.8003491698212	993.5861454064424	2	497.8001403808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LAKAYKTSI_	SEMA6D|p.E377K|1|0.1|ENSG00000137872|chr15:47764669-47764669|G/A|missense_variant	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	4703	3046	7746
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7752	23.421	NaN	4772.7	30	0	615.37	0.106			+	48421	VTIQTVTVK	9	67	494.80601156378884	987.5974701943777	2	494.8050842285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTIQTVTVK_	REV__ENSG00000164180|ENST00000296595|TMEM161B;REV__ENST00000457388.1_1_10:37627476-37627722:+|nuORF;REV__ENST00000510089.5_1_5:87492030-87493588:-|nuORF	60.11826168202944	0.21262886028301267	2				NaN	NaN	0	NaN	4704	3046	7746
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7753	23.423	NaN	13071	30	0	2864.4	0.037	+			44677	TTHQVYVLK	9	97	363.54139971538876	1087.6023697463663	3	363.54156494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TTHQVYVLK_	ENSG00000175215|ENST00000398073|CTDSP2	49.536043120802724	0.308405419312776	2				NaN	NaN	0	NaN	4705	3046	7746
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7765	23.449	NaN	168370	30	0	18781	0.149	+			39905	STLTYRMTK	9	99	550.7914735473452	1099.5683941614902	2	550.7918701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STLTYRMTK_	ENST00000446662.5_1_16:22466144-22470768:+|nuORF;ENST00000522841.6_1_16:21490806-21495758:-|nuORF	177.3047273071476	0.0015666121956477066	2				NaN	NaN	0	NaN	4714	3049	7764
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7766	23.451	NaN	44568	30	0	15435	0.106			+	-1	KNMGNKKNR	9	91	369.2010717479278	1104.5813858439835	3	369.2010803222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_KNM(Oxidation (M))GNKKNR_	REV__tr|U7SNP7|U7SNP7_FUSNUDNA-directedDNApolymeraseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01977PE=4SV=1	30.317721548370564	0.5199124245378496	2				NaN	NaN	0	NaN	4715	3049	7764
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7767	23.453	NaN	19013	30	0	2515.9	0.106	+			15716	GVQLSITKK	9	73	487.30544412294364	972.5963353126873	2	487.3052673339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GVQLSITKK_	ENST00000357182.8_1_1:35496249-35497473:-|nuORF;ENST00000373333.1_1_1:35496252-35497272:-|nuORF	145.15565482312357	0.00806134135205793	2				NaN	NaN	0	NaN	4716	3049	7764
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7768	23.455	NaN	10824	30	0	992.34	0.106	+			20445	KEVDVSKQL	9	84	523.2984396444047	1044.5823263556092	2	523.298095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEVDVSKQL_	ENSG00000128944|ENST00000249776|KNSTRN;ENST00000560220.5_1_15:40676698-40685795:+|nuORF;ENST00000560673.1_1_15:40675453-40678696:+|nuORF;nc|ENSG00000128944|Q9Y448-2|KNSTRN;nc|ENSG00000128944|Q9Y448-3|KNSTRN	126.24258497203832	0.01742065577488747	2				NaN	NaN	0	NaN	4717	3049	7764
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7769	23.457	NaN	15299	30	0	2736.4	0.106				-1	ISSGRPCL	8	72	445.2309138991487	888.4472748650974	2	445.23138427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_ISSGRPC(Carbamidomethyl (C))L_	ENST00000398576.6_1_13:46701143-46701437:-|nuORF	60.97194046774394	0.49215940876911696	2				NaN	NaN	0	NaN	4718	3049	7764
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7770	23.459	NaN	22460	30	0	2892.6	0.106	+			49392	VVTEHLINK	9	83	526.8087228623731	1051.602892791546	2	526.8087768554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VVTEHLINK_	ENSG00000036257|ENST00000264414|CUL3;nc|ENSG00000036257|Q13618-2|CUL3	152.06079943815163	0.00638878961959199	2				NaN	NaN	0	NaN	4719	3049	7764
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7771	23.461	NaN	24030	30	0	8910.9	0.038			+	25874	LSFSITNPLGN	11	79	388.2082923027883	1161.603047508565	3	388.2083740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSFSITNPLGN_	REV__ENSG00000143344|ENST00000360851|RGL1;REV__nc|ENSG00000143344|Q9NZL6-2|RGL1;REV__RGL1|p.K583Sfs*25|1|0.84|ENSG00000143344|chr1:183912261-183912261|A/-|frameshift_variant;REV__RGL1|p.L272Ffs*55|1|0.05|ENSG00000143344|chr1:183884802-183884803|-/CATATGGCAAA|frameshift_variant	43.650786325866115	0.5079891456189096	2				NaN	NaN	0	NaN	4720	3049	7764
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7772	23.461	NaN	8914.4	30	0	1204.4	0.141	+			44861	TTVDIFHKK	9	77	544.8079197415948	1087.6012865499895	2	544.8087158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_TTVDIFHKK_	ENSG00000158411|ENST00000289359|MITD1	51.52775601994872	0.28504342437107444	2				NaN	NaN	0	NaN	4721	3049	7764
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7786	23.492	NaN	51550	30	0	4973.9	0.214	+			8847	EENSHLTSV	9	88	508.2381344889104	1014.4617160446209	2	508.23809814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EENSHLTSV_	ENSG00000157557|ENST00000360938|ETS2	180.92599232761785	0.0012030822705978085	2				NaN	NaN	0	NaN	4732	3052	7785
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7787	23.496	NaN	41443	30	0	6813.1	0.106	+			15165	GTSGLILKR	9	105	472.7980010577879	943.5814491823759	2	472.79766845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTSGLILKR_	ENSG00000137825|ENST00000260386|ITPKA;ITPKA|p.K290Vfs*10|1|0.3|ENSG00000137825|chr15:41502054-41502055|-/ATGT|frameshift_variant;ITPKA|p.S212L|1|0.18|ENSG00000137825|chr15:41501683-41501683|C/T|missense_variant	104.0567914643314	0.03506238181059741	2				NaN	NaN	0	NaN	4733	3052	7785
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7788	23.498	NaN	26364	30	0	4540.7	0.106	+			28792	NPHEVQPSY	9	88	535.748947255726	1069.4833415782518	2	535.7490844726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NPHEVQPSY_	EGLN3|p.A203T|1|0.27|ENSG00000129521|chr14:33929083-33929083|C/T|missense_variant;ENSG00000129521|ENST00000250457|EGLN3	77.31757898189308	0.1091473830098891	2				NaN	NaN	0	NaN	4734	3052	7785
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7789	23.5	NaN	12443	30	0	2211.2	0.106			+	-1	QTTKRSQME	9	75	562.7711804206048	1123.5278079080094	2	562.7713623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_QTTKRSQM(Oxidation (M))E_	REV__CPSF6|p.P306Lfs*32|1|0.14|ENSG00000111605|chr12:69258807-69258807|C/-|frameshift_variant;REV__ENSG00000111605|ENST00000435070|CPSF6;REV__ENST00000547486.1_1_12:69645004-69651771:+|nuORF;REV__nc|ENSG00000111605|Q16630-2|CPSF6;REV__nc|ENSG00000111605|Q16630-3|CPSF6	29.170058357718403	0.5306379469863586	2				NaN	NaN	0	NaN	4735	3052	7785
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7790	23.502	NaN	11428	30	0	2489	0.106				-1	SWCRVGQLWP	10	72	644.8165583046597	1287.6185636761193	2	644.8167114257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_SWC(Carbamidomethyl (C))RVGQLWP_	ENST00000559126.5_1_15:85197121-85197442:-|nuORF	29.170058357718403	0.6416167986984785	2				NaN	NaN	0	NaN	4736	3052	7785
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7791	23.503	NaN	20460	30	0	4473	0.106	+			20246	KELWMALIKK	10	90	630.3812992208774	1258.7480455085547	2	630.3819580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KELWMALIKK_	AK9|p.R1209Gfs*39|2|0.33|ENSG00000155085|chr6:109529019-109529019|T/-|frameshift_variant;ENSG00000155085|ENST00000424296|AK9;ENST00000466992.1_1_6:109871214-109940313:-|nuORF;nc|ENSG00000155085|Q5TCS8-1|AK9;nc|ENSG00000155085|Q5TCS8-3|AK9;nc|ENSG00000155085|Q5TCS8-6|AK9	128.3478880297481	0.01553957493207534	2				NaN	NaN	0	NaN	4737	3052	7785
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7792	23.505	NaN	3766.9	30	0	674.75	0.036	+			30348	PTVREQIPL	9	75	351.54116268717326	1051.6016586617197	3	351.5414733886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PTVREQIPL_	ENSG00000151611|ENST00000649156|MMAA	34.172542307311794	0.4838870758800184	2				NaN	NaN	0	NaN	4738	3052	7785
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7805	23.532	NaN	13840	30	0	1713.5	0.213	+			37543	SLLTVHQRIH	10	89	602.3510473931999	1202.6875418531997	2	602.3507690429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLLTVHQRIH_	ENSG00000197608|ENST00000594440|ZNF841;nc|ENSG00000197608|Q6ZN19|ZNF841	101.45984612302182	0.07336148045341315	2				NaN	NaN	0	NaN	4748	3055	7804
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7806	23.536	NaN	10907	30	0	833.9	0.106	+			12779	GELSKVTKV	9	73	480.78971419993104	959.5648754666621	2	480.7894592285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GELSKVTKV_	ENSG00000119421|ENST00000373768|NDUFA8	89.02883481214508	0.06760336634167786	2				NaN	NaN	0	NaN	4749	3055	7804
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7807	23.538	NaN	13395	30	0	7221	0.106			+	44996	TVEASLGNTGA	11	76	340.5051689352346	1018.4936774059039	3	340.5052490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVEASLGNTGA_	REV__ENSG00000205592|ENST00000454784|MUC19;REV__nc|ENSG00000205592|Q7Z5P9-2|MUC19	45.908116695636124	0.4771019740774998	2				NaN	NaN	0	NaN	4750	3055	7804
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7808	23.54	NaN	9724.1	30	0	1965.5	0.106			+	-1	KEKQCGRIV	9	74	559.3113397929748	1116.6081266527494	2	559.313232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_KEKQC(Carbamidomethyl (C))GRIV_	REV__ENST00000398417.6_1_18:48556074-48573390:+|nuORF	51.33545320467046	0.2872990594074956	2				NaN	NaN	0	NaN	4751	3055	7804
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7809	23.541	NaN	6531.9	30	0	871.72	0.106	+			14720	GTINIVHPK	9	69	489.7898611332051	NaN	0	489.7899475097656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTINIVHPK_	ENSG00000135069|ENST00000376588|PSAT1;nc|ENSG00000135069|Q9Y617-2|PSAT1	68.84614121027924	0.11159004992091766	2				NaN	NaN	0	NaN	4752	3055	7804
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7810	23.543	NaN	6910	30	0	908.48	0.106	+			33143	RESDLSSKTQL	11	74	632.3299759637683	1262.6453989943366	2	632.3306274414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RESDLSSKTQL_	ENSG00000126777|ENST00000395314|KTN1;ENST00000555164.2_1_14:56119589-56122865:+|nuORF;KTN1|p.A1102Gfs*15|2|0.3|ENSG00000126777|chr14:55670756-55670757|-/A|frameshift_variant;KTN1|p.H994Sfs*2|1|0.35|ENSG00000126777|chr14:55659677-55659678|-/C|frameshift_variant;KTN1|p.K1078Nfs*12|1|0.3|ENSG00000126777|chr14:55667292-55667292|A/-|frameshift_variant;KTN1|p.K1101Rfs*18|1|0.4|ENSG00000126777|chr14:55670757-55670757|A/-|frameshift_variant;KTN1|p.P993Lfs*6|1|0.36|ENSG00000126777|chr14:55659678-55659678|C/-|frameshift_variant;nc|ENSG00000126777|Q86UP2-2|KTN1;nc|ENSG00000126777|Q86UP2-3|KTN1;nc|ENSG00000126777|Q86UP2-4|KTN1	94.81966064512906	0.07904432929123503	2				NaN	NaN	0	NaN	4753	3055	7804
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7811	23.545	NaN	5367.5	30	0	561.95	0.032	+			20926	KKAAKAGL	8	65	393.7633412699853	785.5121296067706	2	393.76324462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KKAAKAGL_	ENSG00000005007|ENST00000262803|UPF1;nc|ENSG00000005007|Q92900|UPF1	20.481830146152948	0.8005983782650069	2				NaN	NaN	0	NaN	4754	3055	7804
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7822	23.569	NaN	28431	30	0	6780	0.214	+			14136	GSMGSFSEK	9	81	465.2052407017427	928.3959284702854	2	465.2051696777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSMGSFSEK_	EMC1|p.F608Lfs*7|1|0.38|ENSG00000127463|chr1:19231381-19231381|A/-|frameshift_variant;EMC1|p.F974Lfs*4|1|0.22|ENSG00000127463|chr1:19219363-19219363|A/-|frameshift_variant;ENSG00000127463|ENST00000477853|EMC1;nc|ENSG00000127463|Q8N766-2|EMC1;nc|ENSG00000127463|Q8N766-3|EMC1;nc|ENSG00000127463|Q8N766-4|EMC1	93.5975768576971	0.05472259948179787	2				NaN	NaN	0	NaN	4762	3058	7821
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7823	23.573	NaN	13800	30	0	2103.2	0.106			+	-1	RMWQLLAQR	9	91	609.3329873797065	1216.651421826213	2	609.3329467773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_RM(Oxidation (M))WQLLAQR_	REV__ENST00000555015.5_2_14:35438466-35451708:-|nuORF	44.116797842482775	0.37197099687881774	2				NaN	NaN	0	NaN	4763	3058	7821
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7824	23.575	NaN	19738	30	0	5645	0.106			+	-1	QQCKAIQKK	9	84	566.3178491383986	1130.6211453435972	2	566.3180541992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_QQC(Carbamidomethyl (C))KAIQKK_	REV__ENSG00000108465|ENST00000338399|CDK5RAP3;REV__ENST00000445194.2_1_20:29873705-29874359:-|nuORF;REV__nc|ENSG00000108465|Q96JB5-2|CDK5RAP3;REV__nc|ENSG00000108465|Q96JB5-4|CDK5RAP3	63.30626980617807	0.18605348971131092	2				NaN	NaN	0	NaN	4764	3058	7821
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7825	23.577	NaN	13896	30	0	1113.3	0.106	+			42931	TEIKKTEVL	9	85	530.8162743615164	1059.6179957898328	2	530.8163452148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TEIKKTEVL_	ENSG00000175792|ENST00000322623|RUVBL1;nc|ENSG00000175792|Q9Y265-2|RUVBL1	78.26377905018397	0.10505600812668463	2				NaN	NaN	0	NaN	4765	3058	7821
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7826	23.578	NaN	13653	30	0	1062.3	0.106	+			41384	SVMKSFIKR	9	81	548.3212477657798	1094.6279425983596	2	548.3218383789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVMKSFIKR_	ENSG00000149503|ENST00000394818|INCENP;ENST00000528375.1_1_11:61905314-61909007:+|nuORF;nc|ENSG00000149503|Q9NQS7-2|INCENP	68.84614121027924	0.14577793175421136	2				NaN	NaN	0	NaN	4766	3058	7821
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7827	23.58	NaN	12732	30	0	3220.6	0.106			+	-1	VTLLLMKLM	9	57	365.2168468830046	1092.628711249214	3	365.217041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Oxidation (M)	_VTLLLM(Oxidation (M))KLM(Oxidation (M))_	REV__NALCN|p.T1320M|1|0.3|ENSG00000102452|chr13:101074658-101074658|G/A|missense_variant	32.81241826257853	0.4965981579233955	2				NaN	NaN	0	NaN	4767	3058	7821
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7828	23.582	NaN	5040.9	30	0	606.11	0.035	+			38214	SQGNILENK	9	73	501.7647058065446	1001.5148586798892	2	501.76422119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SQGNILENK_	DYNC2H1|p.L4021Wfs*5|1|0.3|ENSG00000187240|chr11:103358262-103358262|T/-|frameshift_variant;DYNC2H1|p.P3966Hfs*44|1|0.22|ENSG00000187240|chr11:103321194-103321194|T/-|frameshift_variant;ENSG00000187240|ENST00000375735|DYNC2H1;nc|ENSG00000187240|Q8NCM8-2|DYNC2H1	61.691277971877994	0.19951612995419254	2				NaN	NaN	0	NaN	4768	3058	7821
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7841	23.61	NaN	71441	30	0	14794	0.208	+			3672	ASYTKIVVK	9	94	504.8079896193103	1007.6014263054207	2	504.8079528808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASYTKIVVK_	ENSG00000141252|ENST00000437048|VPS53;ENST00000541903.6_1_17:422370-426182:-|nuORF	209.72792722074914	5.3365620456205686E-08	2				NaN	NaN	0	NaN	4778	3061	7840
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7842	23.613	NaN	21555	30	0	2525.6	0.106	+			49147	VVMENVGQQK	10	89	566.2950762978579	1130.5755996625157	2	566.2950439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVMENVGQQK_	ENSG00000004700|ENST00000444129|RECQL	181.4070731898895	0.0010958971522004144	2				NaN	NaN	0	NaN	4779	3061	7840
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7843	23.616	NaN	17302	30	0	1911.5	0.106	+			35840	SEDEPTRSL	9	84	517.2436054938343	1032.4726580544684	2	517.24365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEDEPTRSL_	ENSG00000083312|ENST00000337273|TNPO1;ENSG00000105576|ENST00000425528|TNPO2;ENST00000588484.1_1_19:12826020-12830096:-|nuORF;ENST00000589956.5_1_19:12822112-12831764:-|nuORF;nc|ENSG00000083312|Q92973-2|TNPO1;nc|ENSG00000105576|O14787-2|TNPO2;TNPO1|p.C844Vfs*45|4|0.31|ENSG00000083312|chr5:72903718-72903718|T/-|frameshift_variant;TNPO2|p.H347Pfs*4|1|0.35|ENSG00000105576|chr19:12711373-12711374|-/G|frameshift_variant	109.47833844074708	0.029530294723441826	2				NaN	NaN	0	NaN	4780	3061	7840
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7844	23.617	NaN	15078	30	0	2527.2	0.106	+			26409	LTELYLSRL	9	86	369.8850683019955	1106.6333755061864	3	369.88427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LTELYLSRL_	ENSG00000104142|ENST00000220509|VPS18	44.377184641726394	0.36891676396732553	2				NaN	NaN	0	NaN	4781	3061	7840
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7845	23.619	NaN	5332.1	30	0	676.33	0.106	+			29814	PKIWVLSH	8	69	490.2887815269665	NaN	0	490.2876892089844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PKIWVLSH_	ENSG00000204839|ENST00000398882|MROH6	31.954861631926434	1.7418937515398478	2				NaN	NaN	0	NaN	4782	3061	7840
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7846	23.621	NaN	8909.4	30	0	1190.6	0.106			+	11642	FQHHRRAQLS	10	77	640.3408416540509	1278.6671303749017	2	640.3412475585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FQHHRRAQLS_	REV__ENSG00000102901|ENST00000562787|CENPT;REV__ENST00000436104.6_1_16:67862410-67864187:-|nuORF;REV__ENST00000562513.6_1_16:67862078-67865741:-|nuORF;REV__ENST00000568495.5_1_16:67862172-67864127:-|nuORF;REV__ENST00000569862.5_1_16:67862172-67864187:-|nuORF	36.446750945000026	0.5818864909973037	2				NaN	NaN	0	NaN	4783	3061	7840
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7847	23.623	NaN	8722.9	30	0	1317.6	0.039				-1	 	0	74	414.21623435150434	1239.626873654713	3	414.2159118652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4784	3061	7840
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7862	23.654	NaN	53432	30	0	5820.2	0.214	+			48013	VSQVGKEL	8	79	430.24790628683843	858.4812596404769	2	430.2476501464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSQVGKEL_	ENSG00000168209|ENST00000307365|DDIT4	158.07458414430337	0.10774029380883422	2				NaN	NaN	0	NaN	4796	3064	7861
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7863	23.658	NaN	20802	30	0	12127	0.106			+	31815	QPPTPRAI	8	71	440.25579334757725	878.4970337619545	2	440.25579833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QPPTPRAI_	REV__ENSG00000204463|ENST00000676615|BAG6;REV__ENST00000465348.5_1_6:31610527-31611963:-|nuORF;REV__nc|ENSG00000204463|P46379-2|BAG6;REV__nc|ENSG00000204463|P46379-4|BAG6;REV__nc|ENSG00000204463|P46379-5|BAG6;REV__nc|ENSG00000204463|P46379|BAG6	60.11826168202944	0.5006107059937851	2				NaN	NaN	0	NaN	4797	3064	7861
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7864	23.66	NaN	21125	30	0	6400.7	0.106	+			15801	GVVPFSQRK	9	75	509.2956815049144	1016.5768100766288	2	509.2957458496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GVVPFSQRK_	ENSG00000104517|ENST00000520539|UBR5;nc|ENSG00000104517|O95071-2|UBR5;UBR5|p.A1046Rfs*49|1|0.21|ENSG00000104517|chr8:102299518-102299519|-/G|frameshift_variant;UBR5|p.E2121Kfs*28|1|0.39|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant;UBR5|p.E2121Rfs*13|1|0.28|ENSG00000104517|chr8:102277120-102277121|-/T|frameshift_variant;UBR5|p.F2571Lfs*4|2|0.31|ENSG00000104517|chr8:102262044-102262044|A/-|frameshift_variant;UBR5|p.I1021*|1|0.41|ENSG00000104517|chr8:102300046-102300046|G/-|frameshift_variant;UBR5|p.I1021Hfs*5|1|0.23|ENSG00000104517|chr8:102300045-102300046|-/G|frameshift_variant;UBR5|p.K2120Rfs*13|1|0.24|ENSG00000104517|chr8:102277121-102277122|TT/-|frameshift_variant	61.691277971877994	0.19951612995419254	2				NaN	NaN	0	NaN	4798	3064	7861
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7865	23.662	NaN	9881.4	30	0	1549.8	0.106			+	27475	MLSVINHP	8	62	455.7444513471294	909.4743497610589	2	455.74420166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MLSVINHP_	REV__ENSG00000174799|ENST00000257287|CEP135	50.0245360154114	0.5941082100236891	2				NaN	NaN	0	NaN	4799	3064	7861
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7866	23.664	NaN	11606	30	0	5714.6	0.106	+			15802	GVVPFSQRK	9	62	339.86590668733066	1016.575890662192	3	339.8661193847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GVVPFSQRK_	ENSG00000104517|ENST00000520539|UBR5;nc|ENSG00000104517|O95071-2|UBR5;UBR5|p.A1046Rfs*49|1|0.21|ENSG00000104517|chr8:102299518-102299519|-/G|frameshift_variant;UBR5|p.E2121Kfs*28|1|0.39|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant;UBR5|p.E2121Rfs*13|1|0.28|ENSG00000104517|chr8:102277120-102277121|-/T|frameshift_variant;UBR5|p.F2571Lfs*4|2|0.31|ENSG00000104517|chr8:102262044-102262044|A/-|frameshift_variant;UBR5|p.I1021*|1|0.41|ENSG00000104517|chr8:102300046-102300046|G/-|frameshift_variant;UBR5|p.I1021Hfs*5|1|0.23|ENSG00000104517|chr8:102300045-102300046|-/G|frameshift_variant;UBR5|p.K2120Rfs*13|1|0.24|ENSG00000104517|chr8:102277121-102277122|TT/-|frameshift_variant	24.519189625965996	0.574102787014149	2				NaN	NaN	0	NaN	4800	3064	7861
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7867	23.666	NaN	9934.3	30	0	2674.2	0.034	+			24256	LETSTGHSL	9	84	472.73908958358805	943.4636262339761	2	472.73760986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LETSTGHSL_	nc|ENSG00000124831|Q32MZ4-2|LRRFIP1;nc|ENSG00000124831|Q32MZ4-3|LRRFIP1;nc|ENSG00000124831|Q32MZ4|LRRFIP1	74.25504064058377	0.12238981753128622	2				NaN	NaN	0	NaN	4801	3064	7861
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7868	23.666	NaN	8749.5	30	0	1193.2	0.141	+			41121	SVISRPIVQK	10	71	563.8508672322332	1125.6871815312663	2	563.8511962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVISRPIVQK_	ENSG00000165185|ENST00000337530|KIAA1958;nc|ENSG00000165185|Q8N8K9-2|KIAA1958;nc|ENSG00000165185|Q8N8K9-3|KIAA1958	61.691277971877994	0.35045824941635534	2				NaN	NaN	0	NaN	4802	3064	7861
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7882	23.698	NaN	56443	30	0	4700.8	0.211			+	-1	QMSCRRHEYRC	11	103	791.8432457410717	1581.6719385489432	2	791.8402099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_QMSC(Carbamidomethyl (C))RRHEYRC(Carbamidomethyl (C))_	REV__L1PB1_dup10508|chr13:43056899-43059152:-|2.941020511291588|0.4940460713329822|2.57|483.0|7|1|sense	9.182911543092327	0.8274909109651483	2				NaN	NaN	0	NaN	4813	3067	7881
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7883	23.701	NaN	40589	30	0	2986.6	0.106	+			44640	TTFTKIVNK	9	107	526.3112033967154	1050.6078538602308	2	526.3111572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTFTKIVNK_	ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1670Tfs*23|1|0.29|ENSG00000174231|chr17:1659487-1659487|C/-|frameshift_variant	167.22876102047192	0.0032399547248545047	2				NaN	NaN	0	NaN	4814	3067	7881
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7884	23.703	NaN	20064	30	0	2240.3	0.106	+			1442	AEYSTKNNAL	10	84	555.7754286273722	NaN	0	555.775390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEYSTKNNAL_	ENSG00000129128|ENST00000503362|SPCS3;ENST00000507678.5_1_4:177243228-177249478:+|nuORF;ENST00000513139.1_1_4:177241188-177248429:+|nuORF	93.5975768576971	0.04026034934357614	2				NaN	NaN	0	NaN	4815	3067	7881
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7885	23.705	NaN	13657	30	0	2956.5	0.106	+			17617	IEHLIGKKL	9	86	350.8933030989301	1049.6580798969903	3	350.8937683105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IEHLIGKKL_	DDX47|p.R377H|1|0.32|ENSG00000213782|chr12:12827269-12827269|G/A|missense_variant;ENSG00000213782|ENST00000358007|DDX47;nc|ENSG00000213782|Q9H0S4-2|DDX47	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	4816	3067	7881
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7886	23.707	NaN	30022	30	0	5936.5	0.106	+			36407	SETNDTKVL	9	89	503.75631879570926	1005.4980846582185	2	503.75616455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SETNDTKVL_	ENSG00000111057|ENST00000388835|KRT18;ENST00000453838.2_1_1:182928211-182928406:-|nuORF	106.68306549817024	0.032382560583716295	2				NaN	NaN	0	NaN	4817	3067	7881
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7887	23.709	NaN	6465.5	30	0	773.21	0.035			+	16571	HFLQGAKSL	9	68	500.7808219264353	999.5470909196706	2	500.78021240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HFLQGAKSL_	REV__ENSG00000204033|ENST00000372113|LRIT2;REV__nc|ENSG00000204033|A6NDA9-2|LRIT2	56.72105179125745	0.24094814563026265	2				NaN	NaN	0	NaN	4818	3067	7881
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7888	23.709	NaN	5015.4	30	0	465.51	0.138	+			17948	IGPKGNSL	8	56	393.22949732807183	784.4444417229437	2	393.22930908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IGPKGNSL_	ENSG00000115677|ENST00000310931|HDLBP;ENST00000470710.1_1_2:242194755-242195742:-|nuORF;HDLBP|p.S551Kfs*2|1|0.11|ENSG00000115677|chr2:241248082-241248083|-/T|frameshift_variant	55.50420428727701	0.5462892107279674	2				NaN	NaN	0	NaN	4819	3067	7881
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7904	23.744	NaN	65587	30	0	4500.3	0.214	+			31321	QINLLHKGS	9	125	505.29310904936557	1008.5716651655312	2	505.2930908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QINLLHKGS_	ENSG00000130052|ENST00000374599|STARD8;nc|ENSG00000130052|Q92502|STARD8;STARD8|p.A874Sfs*16|1|0.42|ENSG00000130052|chrX:68723677-68723678|-/C|frameshift_variant;STARD8|p.L976Afs*8|1|0.27|ENSG00000130052|chrX:68724090-68724091|-/G|frameshift_variant	49.44154591367651	0.3095138337212152	2				NaN	NaN	0	NaN	4832	3070	7903
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7905	23.748	NaN	14110	30	0	1817.7	0.106	+			38058	SPRSPDTTL	9	72	487.25096594579435	972.4873789583887	2	487.2510681152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SPRSPDTTL_	ENSG00000205277|ENST00000536621|MUC12;ENSG00000205277|ENST00000536621|MUC12;ENSG00000205277|ENST00000536621|MUC12;nc|ENSG00000205277|Q9UKN1|MUC12;nc|ENSG00000205277|Q9UKN1|MUC12;nc|ENSG00000205277|Q9UKN1|MUC12	65.46538089061403	0.16805504838372562	2				NaN	NaN	0	NaN	4833	3070	7903
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7906	23.75	NaN	9440	30	0	2997.7	0.106				-1	 	0	65	384.7720451196625	767.529537306125	2	384.7721252441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4834	3070	7903
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7907	23.752	NaN	20527	30	0	2398.9	0.106	+			43125	TERPQPQTL	9	78	535.2855892696624	1068.5566256061247	2	535.2860107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TERPQPQTL_	ENSG00000104671|ENST00000221114|DCTN6	66.9202029811203	0.15592758990009112	2				NaN	NaN	0	NaN	4835	3070	7903
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7908	23.754	NaN	15980	30	0	6400	0.106	+			9522	ELAEGLLLHI	10	75	369.8850683019955	1106.6333755061864	3	370.22265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ELAEGLLLHI_	NLRC4|p.Q324H|1|0.36|ENSG00000091106|chr2:32250892-32250892|T/G|missense_variant	36.446750945000026	0.5818864909973037	2				NaN	NaN	0	NaN	4836	3070	7903
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7909	23.755	NaN	11692	30	0	1468.5	0.037	+			15814	GVYGDVQRVK	10	82	560.8094594487668	1119.6043659643335	2	560.8097534179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GVYGDVQRVK_	ENSG00000011304|ENST00000356948|PTBP1;ENSG00000117569|ENST00000674951|PTBP2;ENST00000586944.5_1_19:807712-810823:+|nuORF;nc|ENSG00000011304|P26599-1|PTBP1;nc|ENSG00000011304|P26599-2|PTBP1;nc|ENSG00000117569|Q9UKA9-2|PTBP2;nc|ENSG00000117569|Q9UKA9-3|PTBP2;nc|ENSG00000117569|Q9UKA9-4|PTBP2;PTBP2|p.N446Ifs*21|1|0.27|ENSG00000117569|chr1:96812873-96812873|A/-|frameshift_variant;PTBP2|p.P452Sfs*10|1|0.17|ENSG00000117569|chr1:96812888-96812889|-/T|frameshift_variant	104.01359247289065	0.06577755598965461	2				NaN	NaN	0	NaN	4837	3070	7903
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7910	23.756	NaN	13723	30	0	1791.9	0.143				-1	 	0	81	336.5340769935905	1006.5804015809715	3	336.5343933105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4838	3070	7903
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7928	23.796	NaN	54931	30	0	27708	0.214	+			40107	STPDAVMGNPK	11	88	558.7712169827805	1115.527881032361	2	558.7715454101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STPDAVMGNPK_	ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF	169.6522961985778	2.909638704099596E-05	2				NaN	NaN	0	NaN	4853	3073	7927
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7929	23.799	NaN	20305	30	0	4801.1	0.106	+			47060	VLGPTPVQK	9	74	469.7870961369338	937.5596393406677	2	469.7865905761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VLGPTPVQK_	ENSG00000166225|ENST00000549921|FRS2	79.71258880314673	0.09879134589249085	2				NaN	NaN	0	NaN	4854	3073	7927
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7930	23.801	NaN	22683	30	0	2121.5	0.106	+			41181	SVLAETIKK	9	93	494.80495576493865	987.5953585966773	2	494.80511474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVLAETIKK_	ENSG00000074054|ENST00000696935|CLASP1;nc|ENSG00000074054|Q7Z460-2|CLASP1;nc|ENSG00000074054|Q7Z460-3|CLASP1;nc|ENSG00000074054|Q7Z460-4|CLASP1;nc|ENSG00000074054|Q7Z460-5|CLASP1;nc|ENSG00000074054|Q7Z460|CLASP1	90.60085204095205	0.06317133949006545	2				NaN	NaN	0	NaN	4855	3073	7927
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7931	23.803	NaN	21667	30	0	5260.7	0.106				-1	 	0	85	638.3139864034102	1274.6134198736204	2	638.3145751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4856	3073	7927
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7932	23.805	NaN	7687	30	0	1195.7	0.106	+			2163	ALLQEQGL	8	62	436.24771519360127	870.4808774540026	2	436.2474670410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ALLQEQGL_	ENSG00000181026|ENST00000332810|AEN;ENST00000557787.1_1_15:89164581-89170043:+|nuORF;nc|ENSG00000181026|Q8WTP8-2|AEN	65.80317337860623	0.44433089765398776	2				NaN	NaN	0	NaN	4857	3073	7927
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7933	23.807	NaN	8828	30	0	1120.3	0.034	+			47647	VSCPVGIKK	9	77	465.7756185426857	929.5366841521715	2	465.7752685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VSCPVGIKK_	ENSG00000175806|ENST00000317173|MSRA;nc|ENSG00000175806|Q9UJ68-2|MSRA;nc|ENSG00000175806|Q9UJ68-3|MSRA;nc|ENSG00000175806|Q9UJ68-4|MSRA;nc|ENSG00000175806|Q9UJ68-5|MSRA	66.42927471994793	0.16001998865088202	2				NaN	NaN	0	NaN	4858	3073	7927
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7934	23.807	NaN	7309.2	30	0	863.3	0.141	+			8634	EDGSQLVVKR	10	73	565.8124968950171	NaN	0	565.8119506835938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EDGSQLVVKR_	ENSG00000066135|ENST00000372396|KDM4A;nc|ENSG00000066135|O75164-2|KDM4A	37.81151784470057	0.3760215235790741	2				NaN	NaN	0	NaN	4859	3073	7927
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7949	23.839	NaN	64558	30	0	22740	0.214			+	4533	ATKYLFGSHS	10	98	370.85728815746666	1109.5500350726	3	370.857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATKYLFGSHS_	REV__ENSG00000186635|ENST00000393609|ARAP1;REV__ENST00000465814.5_1_11:72407932-72423670:-|nuORF;REV__nc|ENSG00000186635|Q96P48-1|ARAP1;REV__nc|ENSG00000186635|Q96P48-2|ARAP1;REV__nc|ENSG00000186635|Q96P48-3|ARAP1;REV__nc|ENSG00000186635|Q96P48-4|ARAP1;REV__nc|ENSG00000186635|Q96P48-7|ARAP1	29.550750289552195	0.6385079145554603	2				NaN	NaN	0	NaN	4871	3076	7948
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7950	23.843	NaN	12224	30	0	2549.8	0.106	+			1398	AEVRKIIRV	9	67	361.9045557007192	1082.6918377023576	3	361.9046936035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEVRKIIRV_	ENSG00000035403|ENST00000211998|VCL;nc|ENSG00000035403|P18206-2|VCL;nc|ENSG00000035403|P18206-3|VCL	61.691277971877994	0.19951612995419254	2				NaN	NaN	0	NaN	4872	3076	7948
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7951	23.845	NaN	12189	30	0	1914	0.106	+			48774	VTYHMFRTK	9	84	591.8096996602745	1181.604846387349	2	591.8095092773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTYHMFRTK_	ENST00000453465.1_1_10:21915067-21915193:-|nuORF;ENST00000478691.5_1_1:23664326-23665089:-|nuORF	70.39856735676683	0.13906523160059378	2				NaN	NaN	0	NaN	4873	3076	7948
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7952	23.847	NaN	5458.1	30	0	646.07	0.106			+	3848	ATALGYRK	8	64	440.25579334757725	878.4970337619545	2	441.2580261230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATALGYRK_	REV__ENSG00000142197|ENST00000691173|DOP1B;REV__nc|ENSG00000142197|Q9Y3R5-2|DOP1B	35.200714571348534	0.6875396545722289	2				NaN	NaN	0	NaN	4874	3076	7948
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7953	23.849	NaN	19106	30	0	2929.7	0.106	+			45655	TYTMKEKIYTM	11	96	704.8461730291389	1407.6777931250776	2	704.8443603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TYTMKEKIYTM_	nc|ENSG00000135679|Q00987-9|MDM2	51.19269402634007	0.4047928213175833	2				NaN	NaN	0	NaN	4875	3076	7948
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7954	23.85	NaN	5705.2	30	0	829.12	0.036				-1	VELCKKDSL	9	68	546.2926198517018	1090.5706867702036	2	546.29296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_VELC(Carbamidomethyl (C))KKDSL_	ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000141367|Q00610-2|CLTC	42.86426827375447	0.38666266728046506	2				NaN	NaN	0	NaN	4876	3076	7948
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7955	23.851	NaN	14213	30	0	1935	0.14	+			28791	NPHEVQPAY	9	79	527.7516179136403	1053.4886828940805	2	527.751708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NPHEVQPAY_	ENSG00000135766|ENST00000366641|EGLN1;ENST00000427525.2_1_15:85177687-85177801:+|nuORF;ENST00000476717.1_1_1:231502159-231556008:-|nuORF;nc|ENSG00000135766|Q9GZT9-2|EGLN1;nc|ENSG00000135766|Q9GZT9-3|EGLN1	41.42661286455405	0.403525789677298	2				NaN	NaN	0	NaN	4877	3076	7948
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7968	23.881	NaN	75972	30	0	15458	0.215				-1	 	0	128	349.52560588097765	1045.554988243133	3	349.52581787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4887	3079	7967
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7969	23.884	NaN	32348	30	0	6645	0.106	+			51556	YYEHVKARF	9	77	404.87694800022143	1211.6090146008644	3	404.8767395019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YYEHVKARF_	ENSG00000115648|ENST00000264605|MLPH;ENST00000468178.5_1_2:238402069-238454213:+|nuORF;ENST00000469619.5_1_2:238402069-238419788:+|nuORF;nc|ENSG00000115648|Q9BV36-2|MLPH;nc|ENSG00000115648|Q9BV36-3|MLPH;nc|ENSG00000115648|Q9BV36-4|MLPH;nc|ENSG00000115648|Q9BV36-5|MLPH	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	4888	3079	7967
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7970	23.886	NaN	11796	30	0	1287.4	0.106	+			12525	GEFEKKYVAT	10	82	586.3036857394875	1170.592818545775	2	586.3037719726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEFEKKYVAT_	ENSG00000132341|ENST00000543796|RAN	59.93077597824379	0.36646980200755325	2				NaN	NaN	0	NaN	4889	3079	7967
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7971	23.888	NaN	14526	30	0	4688.7	0.106			+	14286	GSVSLRAIPP	10	70	332.8657982102387	995.5755652309163	3	332.86602783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GSVSLRAIPP_	REV__ENSG00000089597|ENST00000356638|GANAB;REV__ENST00000524437.5_1_11:62402291-62406896:-|nuORF;REV__ENST00000526210.1_1_11:62402291-62407104:-|nuORF;REV__nc|ENSG00000089597|Q14697-2|GANAB	35.61828744233558	0.588957954432594	2				NaN	NaN	0	NaN	4890	3079	7967
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7972	23.89	NaN	18334	30	0	3460.2	0.106	+			15180	GTSITVPQK	9	81	465.7663904746585	929.5182280161171	2	465.76641845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTSITVPQK_	ENSG00000134851|ENST00000381334|TMEM165;ENST00000508404.5_1_4:56269487-56291616:+|nuORF;nc|ENSG00000134851|Q9HC07-2|TMEM165;TMEM165|p.L309Wfs*10|1|0.25|ENSG00000134851|chr4:55425397-55425397|T/-|frameshift_variant	93.1432384553994	0.056003526918089595	2				NaN	NaN	0	NaN	4891	3079	7967
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7973	23.892	NaN	9379.6	30	0	1522.9	0.106			+	-1	TVMVRMRMGK	10	84	620.8194935204136	1239.6244341076272	2	620.8193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Oxidation (M)	_TVM(Oxidation (M))VRM(Oxidation (M))RMGK_	REV__ENST00000472943.5_1_3:156468053-156468937:-|nuORF	42.86426827375447	0.522752283233888	2				NaN	NaN	0	NaN	4892	3079	7967
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7974	23.894	NaN	7464.9	30	0	736.58	0.036	+			31511	QLFHSQTLT	9	71	537.7842056551925	1073.553858377185	2	537.7850952148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QLFHSQTLT_	ENSG00000112592|ENST00000392092|TBP;nc|ENSG00000112592|P20226-2|TBP	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	4893	3079	7967
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7989	23.925	NaN	32646	30	0	2582.6	0.214	+			1014	AEKLGETEKL	10	94	559.3098856565451	1116.6052183798902	2	559.3091430664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEKLGETEKL_	ENSG00000182481|ENST00000330459|KPNA2;ENST00000578492.5_1_17:62746826-62750158:-|nuORF	176.59839592901017	0.0015875574101036562	2				NaN	NaN	0	NaN	4905	3082	7988
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7990	23.929	NaN	16188	30	0	2843.5	0.106	+			20983	KKFKELQK	8	76	524.8295756968706	1047.6445984605411	2	524.82958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KKFKELQK_	SYNE1|p.L8485F|1|0.32|ENSG00000131018|chr6:152139955-152139955|G/A|missense_variant	110.11987700582712	0.24509564897437786	2				NaN	NaN	0	NaN	4906	3082	7988
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7991	23.931	NaN	12422	30	0	1535.7	0.106	+			46272	VEHGNLREL	9	80	356.19256286840374	1065.5558592054113	3	356.1927185058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VEHGNLREL_	ENSG00000134014|ENST00000256398|ELP3;nc|ENSG00000134014|Q9H9T3-2|ELP3;nc|ENSG00000134014|Q9H9T3-4|ELP3;nc|ENSG00000134014|Q9H9T3-5|ELP3	52.936696900407355	0.27249468807391813	2				NaN	NaN	0	NaN	4907	3082	7988
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7992	23.932	NaN	19511	30	0	2917.2	0.106	+			48266	VTDHNLHEL	9	82	539.270096571034	NaN	0	539.270263671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTDHNLHEL_	ENSG00000177971|ENST00000403490|IMP3	129.42129120953632	0.0006770487180932568	2				NaN	NaN	0	NaN	4908	3082	7988
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7993	23.934	NaN	18117	30	0	1650.8	0.106	+			28153	NALNHTEQY	9	91	545.2523132042622	1088.4900734753244	2	545.2523193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NALNHTEQY_	ENSG00000146281|ENST00000275072|PM20D2	118.74307786436346	0.02196067127630568	2				NaN	NaN	0	NaN	4909	3082	7988
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7994	23.936	NaN	10419	30	0	3375.7	0.039	+			7383	DDVESFVSRLQ	11	80	647.8172880851237	1293.6200232370472	2	647.8173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DDVESFVSRLQ_	ENSG00000131037|ENST00000201647|EPS8L1;ENST00000592284.5_1_19:55593146-55593922:+|nuORF;EPS8L1|p.D510Efs*3|1|0.38|ENSG00000131037|chr19:55086071-55086072|AC/-|frameshift_variant;nc|ENSG00000131037|Q8TE68-2|EPS8L1;nc|ENSG00000131037|Q8TE68-3|EPS8L1	60.11826168202944	0.32239947305776	2				NaN	NaN	0	NaN	4910	3082	7988
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	7995	23.937	NaN	7111.2	30	0	781.27	0.143			+	19582	KDASELKAE	9	79	495.7589595769383	989.5033662206766	2	495.7587585449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KDASELKAE_	REV__ENSG00000066654|ENST00000396083|THUMPD1	47.227680397652996	0.3354815899219835	2				NaN	NaN	0	NaN	4911	3082	7988
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8008	23.966	NaN	33803	30	0	10954	0.214				-1	 	0	91	362.7588517110649	723.5031504889298	2	362.75897216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4921	3085	8007
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8009	23.97	NaN	31123	30	0	5434.5	0.106	+			15398	GTYGLDSVKK	10	76	534.2904779621424	1066.5664029910847	2	534.29052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTYGLDSVKK_	ENSG00000087338|ENST00000282570|GMCL1	104.01359247289065	0.06577755598965461	2				NaN	NaN	0	NaN	4922	3085	8007
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8010	23.972	NaN	19265	30	0	1622.2	0.106	+			13853	GQWKEEQKL	9	92	573.3016612912602	1144.5887696493203	2	573.3016357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GQWKEEQKL_	ENSG00000157020|ENST00000350697|SEC13;ENST00000477547.6_1_3:10345637-10359739:-|nuORF;ENST00000479868.6_1_3:10342947-10354476:-|nuORF;nc|ENSG00000157020|P55735-2|SEC13;nc|ENSG00000157020|P55735-3|SEC13;nc|ENSG00000157020|P55735-4|SEC13	150.36159442982594	0.006784847064083231	2				NaN	NaN	0	NaN	4923	3085	8007
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8011	23.974	NaN	13985	30	0	2205.7	0.106			+	2388	ANSHIIVIK	9	81	332.2061620069492	993.5966566210477	3	332.2062683105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ANSHIIVIK_	REV__tr|U7SU23|U7SU23_FUSNUMetallo-beta-lactamasedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00989PE=4SV=1	54.722347961057174	0.257609425301511	2				NaN	NaN	0	NaN	4924	3085	8007
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8012	23.976	NaN	15347	30	0	2972.2	0.106			+	25090	LLNGNENGL	9	71	472.24593662887827	942.4773203245566	2	472.2456970214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LLNGNENGL_	REV__ENSG00000141664|ENST00000269499|ZCCHC2;REV__nc|ENSG00000141664|Q9C0B9-2|ZCCHC2;REV__ZCCHC2|p.P959Lfs*21|1|0.06|ENSG00000141664|chr18:62574947-62574948|-/CTGTTCCT|frameshift_variant	52.936696900407355	0.27249468807391813	2				NaN	NaN	0	NaN	4925	3085	8007
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8013	23.977	NaN	14338	30	0	3084.8	0.106	+			28966	NSGARIGLAE	10	77	494.26460879965003	986.5146646661001	2	494.26446533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NSGARIGLAE_	ACACA|p.E2200Gfs*26|1|0.48|ENSG00000278540|chr17:37097953-37097954|-/T|frameshift_variant;ENSG00000278540|ENST00000616317|ACACA;nc|ENSG00000278540|Q13085-2|ACACA;nc|ENSG00000278540|Q13085-3|ACACA;nc|ENSG00000278540|Q13085|ACACA	49.536043120802724	0.461275219792494	2				NaN	NaN	0	NaN	4926	3085	8007
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8014	23.979	NaN	14051	30	0	3382.1	0.033	+			51340	YSPTSKAL	8	80	433.7343574179509	NaN	0	433.734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YSPTSKAL_	ENSG00000132405|ENST00000409757|TBC1D14;TBC1D14|p.L519*|1|0.21|ENSG00000132405|chr4:7010689-7010689|T/-|frameshift_variant;TBC1D14|p.R544*|1|0.35|ENSG00000132405|chr4:7010757-7010758|-/T|frameshift_variant	58.78195531508484	1.7418937515398478	2				NaN	NaN	0	NaN	4927	3085	8007
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8032	24.017	NaN	27473	30	0	6466.7	0.214	+			14867	GTLNQPLTK	9	85	486.2797224823878	970.5448920315756	2	486.2796936035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTLNQPLTK_	ENSG00000103671|ENST00000261884|TRIP4	152.06079943815163	0.00638878961959199	2				NaN	NaN	0	NaN	4942	3088	8031
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8033	24.02	NaN	17024	30	0	1327.6	0.106	+			25252	LNKLIHQS	8	80	476.7823036401065	951.550054347013	2	476.78216552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LNKLIHQS_	DDX25|p.R437Afs*11|1|0.24|ENSG00000109832|chr11:125921294-125921294|G/-|frameshift_variant;ENSG00000109832|ENST00000263576|DDX25	90.77665401227738	0.27511901818546464	2				NaN	NaN	0	NaN	4943	3088	8031
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8034	24.023	NaN	12248	30	0	1509.1	0.106	+			40329	STTAILQQK	9	73	495.2854201872146	988.5562874412292	2	495.284912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STTAILQQK_	ENSG00000196449|ENST00000373044|YRDC	95.81516180277367	0.04847050768394289	2				NaN	NaN	0	NaN	4944	3088	8031
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8035	24.024	NaN	8709.5	30	0	890.83	0.106	+			18692	ITDEFVKQK	9	79	554.3059419175452	1106.5973309018902	2	554.3062744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ITDEFVKQK_	ENSG00000067445|ENST00000173898|TRO;ENSG00000102316|ENST00000375068|MAGED2;ENST00000475183.1_1_X:54953428-54957230:+|nuORF;ENST00000492706.5_1_X:54953428-54957450:+|nuORF;nc|ENSG00000067445|Q12816-2|TRO;nc|ENSG00000067445|Q12816-3|TRO;nc|ENSG00000067445|Q12816-4|TRO;nc|ENSG00000067445|Q12816-5|TRO;nc|ENSG00000102316|Q9UNF1-2|MAGED2;TRO|p.S1034Rfs*10|1|0.07|ENSG00000067445|chrX:54929826-54929826|C/-|frameshift_variant	120.8684288430529	0.02067403653475984	2				NaN	NaN	0	NaN	4945	3088	8031
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8036	24.026	NaN	10784	30	0	3135.2	0.106	+			15818	GVYIATLINGS	11	78	369.8727848333468	1106.5965251002406	3	369.8729553222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GVYIATLINGS_	ENSG00000137642|ENST00000260197|SORL1;ENST00000532451.1_1_11:121323091-121416136:+|nuORF;SORL1|p.F2103Lfs*44|1|0.22|ENSG00000137642|chr11:121625218-121625218|T/-|frameshift_variant;SORL1|p.M1581Cfs*34|2|0.28|ENSG00000137642|chr11:121605196-121605196|A/-|frameshift_variant	31.529811441608018	0.6590691889962369	2				NaN	NaN	0	NaN	4946	3088	8031
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8037	24.028	NaN	24285	30	0	3098.7	0.037	+			43958	TPEEKIREY	9	87	582.7987163946389	1163.5828798560776	2	582.7987060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TPEEKIREY_	ENSG00000138668|ENST00000313899|HNRNPD;ENST00000514325.1_1_4:83279715-83279970:-|nuORF;nc|ENSG00000138668|Q14103-2|HNRNPD;nc|ENSG00000138668|Q14103-3|HNRNPD;nc|ENSG00000138668|Q14103-4|HNRNPD	132.757866228626	0.013877640931359021	2				NaN	NaN	0	NaN	4947	3088	8031
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8038	24.029	NaN	44261	30	0	5965.9	0.141	+			29432	PCGASQSMTLK	11	95	561.7674289512117	1121.5203049692234	2	561.7681274414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PCGASQSMTLK_	ENST00000601799.5_1_19:57742659-57743507:+|nuORF	65.46538089061403	0.2746690761028526	2				NaN	NaN	0	NaN	4948	3088	8031
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8050	24.057	NaN	22783	30	0	2723.4	0.211				-1	 	0	90	680.8656584830156	1359.7167640328312	2	680.8648681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4957	3091	8049
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8051	24.06	NaN	13767	30	0	2178.5	0.106	+			51398	YTNGPLPDK	9	74	502.75620406159635	1003.4978551899927	2	502.7558288574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YTNGPLPDK_	ENSG00000142789|ENST00000290122|CELA3A;ENSG00000219073|ENST00000337107|CELA3B	136.98908636845044	0.011892605960677736	2				NaN	NaN	0	NaN	4958	3091	8049
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8052	24.062	NaN	7515.3	30	0	1232.6	0.106	+			24135	LEKTYSAKL	9	77	351.53753781242244	1051.5907840374673	3	351.5377502441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LEKTYSAKL_	ENSG00000160789|ENST00000368300|LMNA;ENST00000496738.5_1_1:156104631-156105741:+|nuORF;nc|ENSG00000160789|P02545-2|LMNA;nc|ENSG00000160789|P02545-3|LMNA;nc|ENSG00000160789|P02545-4|LMNA;nc|ENSG00000160789|P02545-5|LMNA;nc|ENSG00000160789|P02545-6|LMNA	63.53385203322761	0.18415635464017938	2				NaN	NaN	0	NaN	4959	3091	8049
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8053	24.064	NaN	6650	30	0	831.96	0.106	+			20054	KEKEFEETM	9	81	585.7715625204281	1169.5285721076561	2	585.771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEKEFEETM_	ENSG00000204843|ENST00000628224|DCTN1;nc|ENSG00000204843|Q14203-2|DCTN1;nc|ENSG00000204843|Q14203-3|DCTN1;nc|ENSG00000204843|Q14203-4|DCTN1;nc|ENSG00000204843|Q14203-5|DCTN1;nc|ENSG00000204843|Q14203-6|DCTN1	117.81106730687013	0.02252488733980868	2				NaN	NaN	0	NaN	4960	3091	8049
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8054	24.066	NaN	8055.4	30	0	866.08	0.106	+			24136	LEKTYSAKL	9	76	526.8034591991604	1051.5923654651208	2	526.8032836914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LEKTYSAKL_	ENSG00000160789|ENST00000368300|LMNA;ENST00000496738.5_1_1:156104631-156105741:+|nuORF;nc|ENSG00000160789|P02545-2|LMNA;nc|ENSG00000160789|P02545-3|LMNA;nc|ENSG00000160789|P02545-4|LMNA;nc|ENSG00000160789|P02545-5|LMNA;nc|ENSG00000160789|P02545-6|LMNA	65.15724298150197	0.17062369902793603	2				NaN	NaN	0	NaN	4961	3091	8049
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8055	24.068	NaN	3452.5	30	0	1145	0.106				-1	 	0	59	322.70790240277216	643.4012518723443	2	322.7080993652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4962	3091	8049
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8056	24.069	NaN	3080.8	30	0	311.84	0.033	+			38913	SSPQAGSSL	9	49	417.20397587217633	832.3933988111527	2	417.20361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSPQAGSSL_	ENSG00000064490|ENST00000303088|RFXANK;ENST00000545522.2_1_19:19304755-19308134:+|nuORF;nc|ENSG00000064490|O14593-3|RFXANK;RFXANK|p.H151Pfs*30|1|0.26|ENSG00000064490|chr19:19198114-19198115|-/C|frameshift_variant	38.753607047826485	0.4348790777924195	2				NaN	NaN	0	NaN	4963	3091	8049
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8068	24.095	NaN	10243	30	0	1684.2	0.214				-1	 	0	76	336.5340769935905	1006.5804015809715	3	336.53424072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4972	3094	8067
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8069	24.098	NaN	8061.5	30	0	1502.6	0.106				-1	 	0	74	384.7720451196625	767.529537306125	2	384.7720947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4973	3094	8067
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8070	24.1	NaN	4749	30	0	701.43	0.106	+			15792	GVVGGEIQEK	10	66	508.2748093999503	NaN	0	508.2746276855469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GVVGGEIQEK_	ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1	56.632244143249146	0.2617798060632103	2				NaN	NaN	0	NaN	4974	3094	8067
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8071	24.102	NaN	7428.4	30	0	1117.1	0.106	+			3899	ATAQNIMNPK	10	73	544.2812024916906	1086.547852050181	2	544.2821655273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATAQNIMNPK_	ENSG00000175311|ENST00000311620|ANKS4B	91.26522074875469	0.12383023862516404	2				NaN	NaN	0	NaN	4975	3094	8067
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8072	24.104	NaN	8594.2	30	0	1043	0.106	+			5401	ATYGELQQR	9	70	533.2685870491622	1064.5226211651243	2	533.26708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATYGELQQR_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	78.26377905018397	0.10505600812668463	2				NaN	NaN	0	NaN	4976	3094	8067
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8073	24.106	NaN	7947.4	30	0	655.16	0.106	+			3622	ASVVAIDNK	9	63	458.75849194677056	915.5024309603411	2	458.7581787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASVVAIDNK_	ENSG00000102804|ENST00000458659|TSC22D1;ENSG00000157514|ENST00000372383|TSC22D3;ENST00000487881.2_1_13:45010128-45010713:-|nuORF;nc|ENSG00000102804|Q15714-2|TSC22D1;nc|ENSG00000102804|Q15714-3|TSC22D1;nc|ENSG00000157514|Q99576|TSC22D3	143.37361013837676	0.008897369944672323	2				NaN	NaN	0	NaN	4977	3094	8067
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8074	24.107	NaN	6497.8	30	0	835.21	0.036	+			43150	TESSARLQAGP	11	69	558.7858999418401	1115.55724695048	2	558.7861938476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TESSARLQAGP_	ENST00000431561.7_1_16:3283645-3284759:-|nuORF;ENST00000575630.1_1_16:3283648-3283846:-|nuORF	36.446750945000026	0.6065623449959539	2				NaN	NaN	0	NaN	4978	3094	8067
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8088	24.137	NaN	9192.6	30	0	4012.6	0.214			+	24612	LGRRRTEMI	9	63	377.8852067046473	1130.633790714142	3	377.8854064941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LGRRRTEMI_	REV__ENST00000373060.5_1_6:41566823-41567321:+|nuORF	31.529811441608018	0.5085848003137583	2				NaN	NaN	0	NaN	4989	3097	8087
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8089	24.141	NaN	3779.8	30	0	475.25	0.106				-1	 	0	60	414.21623435150434	1239.626873654713	3	414.2158508300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	4990	3097	8087
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8090	24.143	NaN	5589.5	30	0	1099.8	0.106	+			29518	PDSRGPAL	8	58	406.716722022308	811.418891111416	2	406.71661376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PDSRGPAL_	ENSG00000186907|ENST00000335099|RTN4RL2	47.91560031466742	0.6071945918984287	2				NaN	NaN	0	NaN	4991	3097	8087
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8091	24.145	NaN	4538.7	30	0	461.01	0.106	+			609	ADSILAVKK	9	69	472.7924989271496	943.5704449210992	2	472.7928466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ADSILAVKK_	ENSG00000197919|ENST00000276927|IFNA1;ENSG00000233816|ENST00000610660|IFNA13	47.657333605630114	0.33044192980041115	2				NaN	NaN	0	NaN	4992	3097	8087
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8092	24.146	NaN	4055.4	30	0	452.5	0.106	+			29862	PLETIQKK	8	62	478.7922289145829	955.5699048959658	2	478.79205322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PLETIQKK_	ENSG00000119013|ENST00000237889|NDUFB3	71.87747018426188	0.391254423828572	2				NaN	NaN	0	NaN	4993	3097	8087
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8093	24.148	NaN	7279.4	30	0	2793.3	0.035	+			26510	LTPACLAPAAP	11	60	512.7783449246251	1023.5421369160503	2	512.7752075195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LTPACLAPAAP_	ENST00000313116.11_1_X:47326904-47327099:-|nuORF	34.172542307311794	0.6313490974540716	2				NaN	NaN	0	NaN	4994	3097	8087
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8094	24.149	NaN	4202.4	30	0	502.35	0.142			+	1198	AEPNYVAPNPA	11	65	571.7785703055781	1141.5425876779561	2	571.7767333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AEPNYVAPNPA_	REV__ENSG00000117751|ENST00000311772|PPP1R8;REV__ENST00000486634.2_1_1:28176630-28178160:+|nuORF;REV__nc|ENSG00000117751|Q12972-2|PPP1R8;REV__nc|ENSG00000117751|Q12972-3|PPP1R8	31.068146907933308	0.6639116734509778	2				NaN	NaN	0	NaN	4995	3097	8087
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8108	24.181	NaN	19250	30	0	3834.8	0.215	+			15051	GTNSLELQK	9	87	495.2669620559686	988.5193711787372	2	495.2666320800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTNSLELQK_	ENSG00000131503|ENST00000360839|ANKHD1;ENST00000462121.1_1_5:139876268-139877642:+|nuORF;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	114.85826248499774	0.024312442104607014	2				NaN	NaN	0	NaN	5006	3100	8107
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8109	24.184	NaN	27996	30	0	2395.7	0.106	+			14708	GTIIVSGSTEK	11	85	546.3001362817002	1090.5857196302004	2	546.3010864257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTIIVSGSTEK_	ENSG00000114742|ENST00000302313|WDR48;nc|ENSG00000114742|Q8TAF3-3|WDR48;nc|ENSG00000114742|Q8TAF3-4|WDR48	133.7523857240709	0.0010046400317632145	2				NaN	NaN	0	NaN	5007	3100	8107
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8110	24.189	NaN	9053	30	0	2151.2	0.106				-1	 	0	72	638.3139864034102	1274.6134198736204	2	638.3140869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5008	3100	8107
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8111	24.191	NaN	20085	30	0	12536	0.106	+			47976	VSPGERATL	9	64	465.2559068303286	NaN	0	465.2558288574219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSPGERATL_	nc|ENSG00000224041|A0A087WSY6|IGKV3D-15;nc|ENSG00000244437|P01624|IGKV3-15	66.96192283764107	0.11962625698446946	2				NaN	NaN	0	NaN	5009	3100	8107
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8112	24.193	NaN	7206.8	30	0	952.56	0.036	+			10389	EVDPDTKEM	9	78	532.2345215961503	1062.4544902591006	2	532.2343139648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EVDPDTKEM_	ENSG00000182774|ENST00000647841|RPS17;ENST00000396783.2_1_6:29457050-29457287:-|nuORF;ENST00000423610.1_1_22:32435574-32435880:+|nuORF;ENST00000461663.1_1_5:116052154-116052343:+|nuORF;ENST00000561068.5_3_15:83205554-83208094:-|nuORF	101.25262130126117	0.03792372629710479	2				NaN	NaN	0	NaN	5010	3100	8107
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8128	24.229	NaN	16919	30	0	3921.4	0.214	+			13185	GIAGSLTNK	9	66	430.7455149012611	859.4764768693223	2	430.7452697753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GIAGSLTNK_	ENSG00000175445|ENST00000650287|LPL	139.97047562133406	0.010493916756945389	2				NaN	NaN	0	NaN	5023	3103	8127
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8129	24.232	NaN	9822.9	30	0	1166.1	0.106	+			27698	MPVRAADKL	9	62	500.7838024926782	NaN	0	500.78387451171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MPVRAADKL_	ENSG00000100603|ENST00000261531|SNW1;ENST00000557663.1_1_14:78205086-78227470:-|nuORF;SNW1|p.M312Nfs*10|1|0.11|ENSG00000100603|chr14:77731086-77731087|-/T|frameshift_variant;SNW1|p.T261Ffs*14|1|0.06|ENSG00000100603|chr14:77732595-77732596|-/TACTTTTAAA|frameshift_variant	53.59686742100583	0.1819050072601507	2				NaN	NaN	0	NaN	5024	3103	8127
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8130	24.235	NaN	8193.2	30	0	947.96	0.106	+			19968	KEGVFAKEV	9	74	503.78186408819454	1005.5491752431891	2	503.781982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEGVFAKEV_	ENSG00000169710|ENST00000306749|FASN	72.2432373244024	0.13108886737667413	2				NaN	NaN	0	NaN	5025	3103	8127
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8131	24.236	NaN	11191	30	0	846.84	0.106	+			36283	SEQGLAKAV	9	64	451.75067404933156	901.4867951654631	2	451.7506103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SEQGLAKAV_	ENSG00000179409|ENST00000319004|GEMIN4;GEMIN4|p.A547V|1|0.24|ENSG00000179409|chr17:746403-746403|G/A|missense_variant	93.1432384553994	0.056003526918089595	2				NaN	NaN	0	NaN	5026	3103	8127
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8132	24.238	NaN	6385.4	30	0	1737.2	0.106			+	26747	LVNAETSKVI	10	74	358.5447040723849	1072.6122828173548	3	358.54498291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LVNAETSKVI_	REV__ENSG00000124789|ENST00000262077|NUP153;REV__nc|ENSG00000124789|P49790-2|NUP153;REV__nc|ENSG00000124789|P49790-3|NUP153;REV__NUP153|p.E1073Kfs*44|1|0.07|ENSG00000124789|chr6:17628983-17628983|T/-|frameshift_variant	36.446750945000026	0.5818864909973037	2				NaN	NaN	0	NaN	5027	3103	8127
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8133	24.24	NaN	11159	30	0	1603.4	0.038	+			27330	MIARRNPEPL	10	81	598.8319858810828	1195.6494188289655	2	598.8319091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MIARRNPEPL_	ENSG00000151366|ENST00000281031|NDUFC2;nc|ENSG00000151366|O95298-2|NDUFC2;nc|ENSG00000151366|O95298-3|NDUFC2;nc|ENSG00000259112|E9PQ53|NDUFC2-KCTD14	92.23892857375223	0.11825556496531454	2				NaN	NaN	0	NaN	5028	3103	8127
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8134	24.241	NaN	9693.6	30	0	1241.5	0.141	+			22922	KVPQVSTPT	9	72	478.7740130622433	955.5334731912866	2	478.7737731933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KVPQVSTPT_	ALB|p.V457Wfs*25|1|0.2|ENSG00000163631|chr4:73417606-73417606|A/-|frameshift_variant;CON__P02768-1;CON__P02769;ENSG00000163631|ENST00000295897|ALB;nc|ENSG00000163631|P02768-2|ALB;nc|ENSG00000163631|P02768-3|ALB	72.87924865735499	0.12833875048249987	2				NaN	NaN	0	NaN	5029	3103	8127
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8147	24.271	NaN	26318	30	0	9000.1	0.214	+			45197	TVNPKESILK	10	86	376.8921378766994	1127.6545842302983	3	376.8923034667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVNPKESILK_	ENSG00000139687|ENST00000267163|RB1;RB1|p.L561Mfs*9|1|0.07|ENSG00000139687|chr13:48381428-48381432|CCTTG/-|frameshift_variant;RB1|p.V654Cfs*4|1|0.33|ENSG00000139687|chr13:48456343-48456343|A/-|frameshift_variant;RB1|p.Y529*|1|0.23|ENSG00000139687|chr13:48381334-48381335|AC/-|frameshift_variant;RB1|p.Y529Tfs*3|1|0.08|ENSG00000139687|chr13:48381329-48381329|T/-|frameshift_variant	66.96192283764107	0.30252237217063654	2				NaN	NaN	0	NaN	5039	3106	8146
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8148	24.274	NaN	19305	30	0	2993.7	0.106	+			10820	FANGRSTGL	9	77	461.74056087258776	921.4665688119755	2	461.7405090332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FANGRSTGL_	ENSG00000077080|ENST00000160382|ACTL6B;ENSG00000136518|ENST00000429709|ACTL6A;nc|ENSG00000136518|O96019-2|ACTL6A	88.17693792209575	0.07000514020414955	2				NaN	NaN	0	NaN	5040	3106	8146
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8149	24.277	NaN	21725	30	0	2970.9	0.106	+			41389	SVMLGGRNIK	10	84	537.8080023161245	1073.601451699049	2	537.80859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVMLGGRNIK_	ENSG00000179950|ENST00000526683|PUF60;nc|ENSG00000179950|Q9UHX1-2|PUF60;nc|ENSG00000179950|Q9UHX1-3|PUF60;nc|ENSG00000179950|Q9UHX1-4|PUF60;nc|ENSG00000179950|Q9UHX1-5|PUF60;nc|ENSG00000179950|Q9UHX1-6|PUF60	136.98908636845044	0.01155686115611441	2				NaN	NaN	0	NaN	5041	3106	8146
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8150	24.278	NaN	12518	30	0	1129.4	0.106				-1	MQADCLQKL	9	75	561.7674289512117	1121.5203049692234	2	561.7684326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))QADC(Carbamidomethyl (C))LQKL_	ENSG00000204516|ENST00000252229|MICB;nc|ENSG00000204516|Q29980-2|MICB	49.44154591367651	0.3095138337212152	2				NaN	NaN	0	NaN	5042	3106	8146
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8151	24.28	NaN	15943	30	0	5584.1	0.106	+			40361	STTRRPPFL	9	69	358.8741549457252	1073.6006354373756	3	358.8747253417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STTRRPPFL_	ENST00000526269.2_1_11:128561788-128562594:-|nuORF	37.81151784470057	0.4459294069877048	2				NaN	NaN	0	NaN	5043	3106	8146
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8152	24.282	NaN	14541	30	0	5961.8	0.106			+	-1	QEGSLKAKKM	10	70	379.20842595450716	NaN	0	379.2084045410156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_QEGSLKAKKM(Oxidation (M))_	REV__ENSG00000186487|ENST00000647738|MYT1L;REV__nc|ENSG00000186487|Q9UL68-3|MYT1L;REV__nc|ENSG00000186487|Q9UL68-4|MYT1L	32.75053402867276	0.3926392905881664	2				NaN	NaN	0	NaN	5044	3106	8146
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8153	24.284	NaN	7380.1	30	0	2414.2	0.03				-1	 	0	63	341.16072608818877	680.3068992431776	2	341.16082763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5045	3106	8146
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8169	24.318	NaN	121390	30	0	29802	0.122	+			4552	ATLDVAVRR	9	100	500.79835715799743	999.5821613827949	2	500.79852294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATLDVAVRR_	ENSG00000100429|ENST00000216271|HDAC10;ENST00000415993.5_1_22:50683938-50688578:-|nuORF;ENST00000454936.5_1_22:50684197-50686327:-|nuORF;ENST00000477814.5_1_22:50684197-50686750:-|nuORF;ENST00000496235.5_1_22:50685302-50686327:-|nuORF;ENST00000497036.5_1_22:50684150-50687609:-|nuORF;ENST00000497952.5_1_22:50685106-50686347:-|nuORF;HDAC10|p.G498D|1|0.4|ENSG00000100429|chr22:50246896-50246896|C/T|missense_variant;nc|ENSG00000100429|Q969S8-2|HDAC10;nc|ENSG00000100429|Q969S8-4|HDAC10	138.06239232086	0.011389075116295402	2				NaN	NaN	0	NaN	5058	3109	8168
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8170	24.32	NaN	186260	30	0	92108	0.067	+			10671	EYSKQMQRF	9	103	608.7927021529093	1215.5708513726186	2	608.7922973632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EYSKQMQRF_	ENSG00000116478|ENST00000373548|HDAC1;ENSG00000196591|ENST00000519065|HDAC2;ENST00000463172.5_1_1:32757770-32792715:+|nuORF;ENST00000481281.5_1_1:32757770-32793222:+|nuORF;nc|ENSG00000196591|Q92769-3|HDAC2	209.83999722684857	5.2930464786782614E-08	2				NaN	NaN	0	NaN	5059	3109	8168
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8171	24.321	NaN	277660	30	0	49999	0.106	+			5452	ATYSVGMQK	9	99	492.7446320904471	983.4747112476942	2	492.7443542480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATYSVGMQK_	ENSG00000131941|ENST00000254260|RHPN2;ENST00000592247.1_1_19:33470904-33481620:-|nuORF;nc|ENSG00000131941|Q8IUC4-2|RHPN2;nc|ENSG00000258628|A8MT19|RHPN2P1	231.2979561070851	6.164117656851855E-13	2				NaN	NaN	0	NaN	5060	3109	8168
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8172	24.323	NaN	18141	30	0	6289.7	0.106			+	18581	ISPNGNPL	8	67	406.21923656957404	810.4239202059481	2	406.2189025878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ISPNGNPL_	REV__ENSG00000181827|ENST00000559447|RFX7;REV__nc|ENSG00000181827|Q2KHR2-1|RFX7;REV__nc|ENSG00000181827|Q2KHR2-2|RFX7;REV__RFX7|p.I1152*|2|0.36|ENSG00000181827|chr15:56093983-56093983|T/-|frameshift_variant;REV__RFX7|p.S919Afs*14|1|0.11|ENSG00000181827|chr15:56094683-56094683|G/-|frameshift_variant	60.97194046774394	0.49215940876911696	2				NaN	NaN	0	NaN	5061	3109	8168
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8173	24.325	NaN	76664	30	0	13898	0.106	+			48851	VVCEYIVKK	9	107	569.3198813587362	1136.6252097842723	2	569.3202514648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_VVC(Carbamidomethyl (C))EYIVKK_	EIF2S3|p.I441Nfs*4|1|0.29|ENSG00000130741|chrX:24073223-24073224|-/A|frameshift_variant;ENSG00000130741|ENST00000253039|EIF2S3;ENSG00000180574|ENST00000538173|EIF2S3B;nc|ENSG00000180574|Q2VIR3-2|EIF2S3B	166.67852932204877	0.003333876602083393	2				NaN	NaN	0	NaN	5062	3109	8168
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8174	24.327	NaN	15790	30	0	2436.8	0.106	+			43232	TEVQKNQVL	9	82	529.7958969908915	1057.577241048583	2	529.795654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TEVQKNQVL_	ENSG00000137364|ENST00000309983|TPMT;TPMT|p.F100Lfs*49|1|0.16|ENSG00000137364|chr6:18143662-18143662|A/-|frameshift_variant	67.49366992349736	0.1516260258713357	2				NaN	NaN	0	NaN	5063	3109	8168
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8175	24.328	NaN	12234	30	0	1672.3	0.037	+			44378	TSLDKFYRK	9	79	579.3195974395577	1156.6246419459153	2	579.3194580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TSLDKFYRK_	ENSG00000034152|ENST00000342679|MAP2K3;MAP2K3|p.Q288Sfs*19|1|0.24|ENSG00000034152|chr17:21312224-21312224|C/-|frameshift_variant;nc|ENSG00000034152|P46734-2|MAP2K3;nc|ENSG00000034152|P46734-3|MAP2K3	101.25262130126117	0.03792372629710479	2				NaN	NaN	0	NaN	5064	3109	8168
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8176	24.329	NaN	36188	30	0	12457	0.144	+			14127	GSLRPFVQK	9	97	344.5378710263807	1030.5917836793421	3	344.5379333496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_GSLRPFVQK_	ENSG00000112297|ENST00000633556|CRYBG1;nc|ENSG00000112297|Q9Y4K1-1|CRYBG1;nc|ENSG00000112297|Q9Y4K1-2|CRYBG1	52.936696900407355	0.27249468807391813	2				NaN	NaN	0	NaN	5065	3109	8168
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8194	24.366	NaN	30485	30	0	4511.8	0.214	+			39857	STLNVGVNK	9	87	466.26369485808965	930.5128367829793	2	466.2636413574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STLNVGVNK_	AGBL5|p.R813Gfs*68|1|0.4|ENSG00000084693|chr2:27069649-27069649|C/-|frameshift_variant;ENSG00000084693|ENST00000360131|AGBL5;nc|ENSG00000084693|Q8NDL9-2|AGBL5;nc|ENSG00000084693|Q8NDL9-3|AGBL5	180.86945649972546	0.001208757763874378	2				NaN	NaN	0	NaN	5080	3112	8193
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8195	24.37	NaN	26481	30	0	3725.8	0.106	+			39351	STCIYGGAPK	10	79	527.2556376574545	1052.4967223817089	2	527.2554931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_STC(Carbamidomethyl (C))IYGGAPK_	DDX5|p.D424Ifs*31|1|0.03|ENSG00000108654|chr17:64500720-64500721|-/AAGCAATTAAT|frameshift_variant;DDX5|p.D572Nfs*6|1|0.04|ENSG00000108654|chr17:64500054-64500055|-/TGACAAGATAGTT|frameshift_variant;DDX5|p.R502Gfs*87|1|0.21|ENSG00000108654|chr17:64500264-64500264|T/-|frameshift_variant;ENSG00000100201|ENST00000403230|DDX17;ENSG00000108654|ENST00000225792|DDX5;ENST00000216019.11_1_22:38888049-38902242:-|nuORF;ENST00000432525.5_1_22:38886367-38903636:-|nuORF;ENST00000581230.5_1_17:62498125-62502378:-|nuORF;ENST00000583894.1_1_17:62499542-62500133:-|nuORF;nc|ENSG00000100201|Q92841-1|DDX17;nc|ENSG00000100201|Q92841-2|DDX17;nc|ENSG00000100201|Q92841-3|DDX17;nc|ENSG00000108654|P17844-2|DDX5	136.26810882979174	0.01174908900087339	2				NaN	NaN	0	NaN	5081	3112	8193
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8196	24.372	NaN	17676	30	0	1984.6	0.106	+			23454	LAEAGGRAL	9	67	429.2455650628041	856.4765771924082	2	429.2453918457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LAEAGGRAL_	ENSG00000197912|ENST00000645818|SPG7;nc|ENSG00000197912|Q9UQ90-2|SPG7	87.69643885390035	0.07135982304947239	2				NaN	NaN	0	NaN	5082	3112	8193
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8197	24.374	NaN	22114	30	0	4038.8	0.106			+	-1	KPVSIDMDGK	10	82	369.1901924577569	1104.5487479734707	3	369.1903991699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_KPVSIDM(Oxidation (M))DGK_	REV__AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;REV__ENSG00000124942|ENST00000378024|AHNAK	48.601550744091256	0.46988609897316763	2				NaN	NaN	0	NaN	5083	3112	8193
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8198	24.376	NaN	36686	30	0	4237.9	0.106	+			13812	GQNPTNAEVLK	11	86	585.8092595934911	1169.6039662537821	2	585.8095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GQNPTNAEVLK_	ENSG00000092841|ENST00000550697|MYL6;ENSG00000196465|ENST00000695999|MYL6B;ENST00000405661.8_1_12:56547702-56549525:+|nuORF;ENST00000546630.1_1_12:56552185-56553570:+|nuORF;ENST00000547703.5_1_12:56552185-56553570:+|nuORF;ENST00000548725.5_1_12:56552185-56553955:+|nuORF;ENST00000549178.5_1_12:56548807-56551507:+|nuORF;ENST00000550152.5_1_12:56547702-56549709:+|nuORF;nc|ENSG00000092841|P60660-2|MYL6	133.7523857240709	0.0010046400317632145	2				NaN	NaN	0	NaN	5084	3112	8193
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8199	24.377	NaN	13804	30	0	1181.5	0.035	+			14128	GSLRPFVQK	9	83	516.3036196742345	1030.5926864152689	2	516.3034057617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GSLRPFVQK_	ENSG00000112297|ENST00000633556|CRYBG1;nc|ENSG00000112297|Q9Y4K1-1|CRYBG1;nc|ENSG00000112297|Q9Y4K1-2|CRYBG1	56.43379154798735	0.2433427591689151	2				NaN	NaN	0	NaN	5085	3112	8193
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8217	24.415	NaN	94748	30	0	13402	0.118	+			23255	KYISKPENL	9	84	546.3083211301765	1090.602089327153	2	546.308349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KYISKPENL_	ENSG00000102547|ENST00000409308|CAB39L;ENSG00000135932|ENST00000258418|CAB39;ENST00000493540.1_1_2:231678823-231682621:+|nuORF	123.20810148215591	0.019257656778428764	2				NaN	NaN	0	NaN	5100	3115	8216
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8218	24.417	NaN	118980	30	0	27204	0.106	+			14725	GTISAITSK	9	81	439.25307518734735	876.4915974414947	2	439.25286865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTISAITSK_	ENSG00000145113|ENST00000463781|MUC4;MUC4|p.L3985Ffs*274|1|0.3|ENSG00000145113|chr3:195779627-195779627|G/-|frameshift_variant;MUC4|p.N4902Tfs*8|1|0.37|ENSG00000145113|chr3:195761027-195761027|T/-|frameshift_variant;nc|ENSG00000145113|Q99102-10|MUC4;nc|ENSG00000145113|Q99102-11|MUC4;nc|ENSG00000145113|Q99102-15|MUC4;nc|ENSG00000145113|Q99102-16|MUC4;nc|ENSG00000145113|Q99102-17|MUC4;nc|ENSG00000145113|Q99102-2|MUC4;nc|ENSG00000145113|Q99102-3|MUC4;nc|ENSG00000145113|Q99102-5|MUC4;nc|ENSG00000145113|Q99102-7|MUC4;nc|ENSG00000145113|Q99102-8|MUC4;nc|ENSG00000145113|Q99102-9|MUC4	190.2614974402762	0.00026591377982909756	2				NaN	NaN	0	NaN	5101	3115	8216
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8219	24.42	NaN	44650	30	0	23312	0.106	+			14465	GTCFGKFTK	9	70	349.1757038685101	1044.5052822057303	3	349.1759338378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_GTC(Carbamidomethyl (C))FGKFTK_	ENSG00000132603|ENST00000254940|NIP7;ENST00000565034.1_1_16:69373956-69375289:+|nuORF;nc|ENSG00000132603|Q9Y221-2|NIP7	53.08895987439943	0.27122541748218487	2				NaN	NaN	0	NaN	5102	3115	8216
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8220	24.421	NaN	50652	30	0	11185	0.106	+			14466	GTCFGKFTK	9	102	523.2621217116323	1044.5096904900645	2	523.2625732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_GTC(Carbamidomethyl (C))FGKFTK_	ENSG00000132603|ENST00000254940|NIP7;ENST00000565034.1_1_16:69373956-69375289:+|nuORF;nc|ENSG00000132603|Q9Y221-2|NIP7	96.0336014099291	0.047854655524928534	2				NaN	NaN	0	NaN	5103	3115	8216
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8221	24.423	NaN	15428	30	0	8363.2	0.106			+	12286	GAYLPQAAIG	10	68	480.76084010422363	959.5071272752473	2	480.7608947753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GAYLPQAAIG_	REV__ENSG00000049860|ENST00000261416|HEXB	53.351449002276354	0.42630798468005626	2				NaN	NaN	0	NaN	5104	3115	8216
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8222	24.425	NaN	7213.4	30	0	2593.7	0.106			+	44237	TRSTFKGAL	9	58	327.5220458860538	979.5443082583613	3	327.5222473144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TRSTFKGAL_	REV__ENSG00000171097|ENST00000302586|KYAT1;REV__ENST00000462722.5_1_9:131598322-131644289:-|nuORF;REV__ENST00000483599.5_1_9:131598322-131607768:-|nuORF;REV__nc|ENSG00000286112|Q16773-2|KYAT1;REV__nc|ENSG00000286112|Q16773-3|KYAT1	17.364965105453717	0.6112419832031293	2				NaN	NaN	0	NaN	5105	3115	8216
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8223	24.427	NaN	7488.2	30	0	1012	0.037	+			48546	VTNWDDMEK	9	69	577.2453708645247	1152.4761887958493	2	577.2454223632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_VTNWDDM(Oxidation (M))EK_	ACTB|p.I85T|1|0.1|ENSG00000075624|chr7:5529270-5529270|A/G|missense_variant;ENSG00000075624|ENST00000646664|ACTB;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENST00000436287.1_1_1:224052226-224052508:-|nuORF;ENST00000457622.1_1_6:46172676-46173294:+|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000502306.1_1_5:15450853-15451165:+|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF	63.42647028704847	0.1850514934184437	2				NaN	NaN	0	NaN	5106	3115	8216
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8236	24.455	NaN	103280	30	0	19171	0.171	+			40920	SVFQTTDTK	9	78	513.7587470364049	1025.5029411396097	2	513.7587280273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVFQTTDTK_	ENSG00000153130|ENST00000608372|SCOC;nc|ENSG00000153130|Q9UIL1-2|SCOC;nc|ENSG00000153130|Q9UIL1-3|SCOC;nc|ENSG00000153130|Q9UIL1-4|SCOC;nc|ENSG00000153130|Q9UIL1|SCOC	174.8648734531126	0.001936507438084573	2				NaN	NaN	0	NaN	5116	3118	8235
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8237	24.458	NaN	91504	30	0	23153	0.106	+			28199	NASRDQVVY	9	89	526.2627858951209	1050.5110188570418	2	526.2622680664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NASRDQVVY_	ENSG00000167608|ENST00000619895|TMC4;nc|ENSG00000167608|Q7Z404-1|TMC4;nc|ENSG00000167608|Q7Z404|TMC4;TMC4|p.F240Lfs*221|1|0.42|ENSG00000167608|chr19:54168267-54168268|AA/-|frameshift_variant;TMC4|p.Q383Rfs*6|1|0.37|ENSG00000167608|chr19:54163872-54163872|G/-|frameshift_variant	78.26377905018397	0.10505600812668463	2				NaN	NaN	0	NaN	5117	3118	8235
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8238	24.46	NaN	29836	30	0	8218.5	0.106	+			40147	STQKKIITP	9	101	339.20939276018305	1014.6063488807492	3	339.2096862792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STQKKIITP_	ENSG00000184939|ENST00000563169|ZFP90;ENST00000571720.2_1_16:68596924-68598598:+|nuORF;ZFP90|p.N617Kfs*10|1|0.27|ENSG00000184939|chr16:68564632-68564633|-/A|frameshift_variant	51.19269402634007	0.2889735674168909	2				NaN	NaN	0	NaN	5118	3118	8235
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8239	24.462	NaN	23275	30	0	3134	0.106	+			44814	TTSHYGQL	8	70	453.71946098627353	905.4243690393471	2	453.7191467285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TTSHYGQL_	MER65-int_dup835|chr19:41770581-41771297:+|1.820753605061792|0.0130686126071448|7.12|477.0|20|3|sense	85.35947970620816	0.2915182781752196	2				NaN	NaN	0	NaN	5119	3118	8235
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8240	24.464	NaN	14131	30	0	1013.6	0.106	+			36226	SELVQKAKL	9	76	508.31075775808597	1014.606962582972	2	508.310791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SELVQKAKL_	ENSG00000166913|ENST00000353703|YWHAB;nc|ENSG00000166913|P31946-2|YWHAB	128.60217544463768	0.015992218256422188	2				NaN	NaN	0	NaN	5120	3118	8235
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8241	24.466	NaN	39899	30	0	9599.8	0.106				-1	LGLCQQLPQ	9	93	528.7788956744669	1055.5432384157336	2	528.7791137695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_LGLC(Carbamidomethyl (C))QQLPQ_	ENST00000249016.4_1_22:41077652-41077814:+|nuORF	47.91560031466742	0.327412564698279	2				NaN	NaN	0	NaN	5121	3118	8235
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8242	24.468	NaN	11368	30	0	2182.5	0.035				-1	 	0	79	336.5340769935905	1006.5804015809715	3	336.5342712402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5122	3118	8235
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8255	24.495	NaN	76804	30	0	46724	0.214				-1	SVPYIRTAM	9	96	351.85023611451095	NaN	0	351.8502502441406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_SVPYIRTAM(Oxidation (M))_	ENST00000578839.5_1_17:61562212-61574724:+|nuORF;nc|ENSG00000159640|P12821-4|ACE	35.15202426646627	0.3000918603816441	2				NaN	NaN	0	NaN	5132	3121	8254
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8256	24.499	NaN	44172	30	0	6139	0.106	+			29259	NYARGHYTI	9	89	547.7725810522162	1093.5306091712323	2	547.772705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NYARGHYTI_	ENSG00000075886|ENST00000321253|TUBA3D;ENSG00000123416|ENST00000336023|TUBA1B;ENSG00000127824|ENST00000248437|TUBA4A;ENSG00000152086|ENST00000312988|TUBA3E;ENSG00000167552|ENST00000301071|TUBA1A;ENSG00000167553|ENST00000301072|TUBA1C;ENSG00000198033|ENST00000400113|TUBA3C;ENST00000462806.5_1_2:220116196-220118580:-|nuORF;ENST00000530835.1_1_11:90015825-90016947:+|nuORF;ENST00000548363.1_1_12:49580068-49582762:-|nuORF;ENST00000550254.1_1_12:49580068-49580335:-|nuORF;nc|ENSG00000127824|P68366-2|TUBA4A;nc|ENSG00000167552|Q71U36-2|TUBA1A;nc|ENSG00000198033|P0DPH7-2|TUBA3C;TUBA3C|p.G144Afs*24|1|0.32|ENSG00000198033|chr13:19177554-19177554|A/-|frameshift_variant;TUBA3C|p.T361Rfs*18|1|0.17|ENSG00000198033|chr13:19174136-19174136|G/-|frameshift_variant;TUBA3D|p.G366Efs*13|1|0.17|ENSG00000075886|chr2:131482588-131482588|G/-|frameshift_variant;TUBA3D|p.V328Pfs*54|1|0.45|ENSG00000075886|chr2:131480665-131480666|-/CCCAAAGA|frameshift_variant;TUBA3E|p.Q176Rfs*14|1|0.58|ENSG00000152086|chr2:130194316-130194316|G/-|frameshift_variant;TUBA4A|p.V182Gfs*32|1|0.04|ENSG00000127824|chr2:219251156-219251157|-/TACACCA|frameshift_variant	101.60071028292904	0.0375685401170269	2				NaN	NaN	0	NaN	5133	3121	8254
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8257	24.501	NaN	18728	30	0	2881.7	0.106	+			42228	TAALAHTSY	9	81	467.73564242755236	933.4567319219047	2	467.73492431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TAALAHTSY_	ENSG00000205277|ENST00000536621|MUC12;nc|ENSG00000205277|Q9UKN1|MUC12	116.90359126533652	0.02307425081617795	2				NaN	NaN	0	NaN	5134	3121	8254
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8258	24.503	NaN	19879	30	0	3859.2	0.106	+			41754	SVSLPSVKK	9	77	472.7924989271496	943.5704449210992	2	472.7920837402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVSLPSVKK_	ENSG00000034677|ENST00000341084|RNF19A;nc|ENSG00000034677|Q9NV58-2|RNF19A;nc|ENSG00000034677|Q9NV58-3|RNF19A;RNF19A|p.R63Efs*5|1|0.16|ENSG00000034677|chr8:100287988-100287988|T/-|frameshift_variant	143.8867514904718	0.008656634767784652	2				NaN	NaN	0	NaN	5135	3121	8254
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8259	24.505	NaN	26456	30	0	12513	0.106			+	41023	SVHKFSAAAP	10	90	338.85015142363534	1013.5286248711061	3	338.8503723144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVHKFSAAAP_	REV__ATIC|p.E517Rfs*11|1|0.32|ENSG00000138363|chr2:215349139-215349151|GAGTTACTCACTG/-|frameshift_variant;REV__ENSG00000138363|ENST00000236959|ATIC;REV__ENST00000443953.5_1_2:216177073-216214375:+|nuORF;REV__nc|ENSG00000138363|P31939-2|ATIC	27.882242232435846	0.6521336255503853	2				NaN	NaN	0	NaN	5136	3121	8254
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8260	24.507	NaN	12072	30	0	1924.4	0.036				-1	 	0	75	344.17807274649937	1029.5123888396981	3	344.17822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5137	3121	8254
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8261	24.507	NaN	14807	30	0	3796.1	0.141	+			9757	ENIEFFGGY	9	64	538.2414480998027	1074.4683432664053	2	538.2417602539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ENIEFFGGY_	VCAM1|p.L453Ffs*23|1|0.35|ENSG00000162692|chr1:100731346-100731347|-/T|frameshift_variant	30.503639358989545	0.5181749237905803	2				NaN	NaN	0	NaN	5138	3121	8254
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8275	24.54	NaN	17731	30	0	1647.6	0.214	+			16192	HEAQIQEM	8	91	493.2239919617281	984.4334309902562	2	493.2238464355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HEAQIQEM_	ENSG00000100345|ENST00000216181|MYH9;SYNDIG1-MYH9|1|fusion	67.49366992349736	0.4277823096851425	2				NaN	NaN	0	NaN	5149	3124	8274
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8276	24.543	NaN	6564	30	0	661.05	0.106			+	36699	SGRTMSTK	8	69	434.2215085536484	866.4284641740968	2	434.2215270996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SGRTMSTK_	REV__ENST00000592828.5_1_19:11687597-11687906:-|nuORF	51.33545320467046	0.5859736979383976	2				NaN	NaN	0	NaN	5150	3124	8274
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8277	24.546	NaN	15857	30	0	1510.6	0.106	+			50680	YEEGPGKNL	9	83	503.74568020311443	1005.4768074730289	2	503.7455139160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YEEGPGKNL_	ENSG00000127184|ENST00000247655|COX7C	95.81516180277367	0.04847050768394289	2				NaN	NaN	0	NaN	5151	3124	8274
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8278	24.547	NaN	31592	30	0	15134	0.106			+	-1	LSCVRSLSL	9	102	345.526612663431	1033.558008590493	3	345.52685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_LSC(Carbamidomethyl (C))VRSLSL_	REV__ENST00000344111.3_1_7:1007687-1008335:-|nuORF	51.19269402634007	0.2889735674168909	2				NaN	NaN	0	NaN	5152	3124	8274
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8279	24.549	NaN	11997	30	0	1185.4	0.106	+			1356	AEVEAQKAQQL	11	79	607.8227668674563	1213.6309808017124	2	607.8225708007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEVEAQKAQQL_	ENSG00000088325|ENST00000300403|TPX2;nc|ENSG00000088325|Q9ULW0-2|TPX2	115.23196543181992	0.02934640941715571	2				NaN	NaN	0	NaN	5153	3124	8274
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8280	24.551	NaN	9441.6	30	0	670.76	0.035	+			14267	GSVAFDYRK	9	74	521.76976860635	NaN	0	521.769775390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GSVAFDYRK_	ENSG00000173898|ENST00000533211|SPTBN2;ENST00000530775.1_1_11:66454463-66454959:-|nuORF;nc|ENSG00000173898|O15020-2|SPTBN2	62.107414245175825	0.1403307765918332	2				NaN	NaN	0	NaN	5154	3124	8274
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8292	24.578	NaN	44154	30	0	9262.1	0.214	+			45170	TVMDKTRAL	9	79	517.7865933654632	1033.5586337977263	2	517.7867431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVMDKTRAL_	CARD17-CASP1|1|fusion;CARD17-CASP1|2|fusion;CASP1|p.N205Ifs*7|1|0.4|ENSG00000137752|chr11:105030343-105030343|T/-|frameshift_variant;ENSG00000137752|ENST00000533400|CASP1;ENSG00000204397|ENST00000673097|CARD16;ENST00000526511.5_1_11:104901858-104905840:-|nuORF;ENST00000527065.1_1_11:104915107-104915377:-|nuORF;nc|ENSG00000137752|P29466-2|CASP1;nc|ENSG00000204397|Q5EG05|CARD16	131.61620852596164	0.014413238321579053	2				NaN	NaN	0	NaN	5163	3127	8291
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8293	24.582	NaN	30368	30	0	4901.3	0.106	+			8017	DTMTLVFVL	9	99	352.1885936106344	1053.5439514321033	3	352.18829345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_DTM(Oxidation (M))TLVFVL_	HERV1_I-int_dup2|chr3:34679996-34686397:+|1.0948245018220069|0.0565463038051543|4.28|448.0|216|1|anti-sense	79.45101966838831	0.09992237243120712	2				NaN	NaN	0	NaN	5164	3127	8291
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8294	24.584	NaN	11217	30	0	2081.6	0.106	+			4566	ATLEETLVKKK	11	85	630.3812996330082	1258.7480463328163	2	630.3818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATLEETLVKKK_	ENSG00000254093|ENST00000314787|PINX1	89.56079334093651	0.10057263200875313	2				NaN	NaN	0	NaN	5165	3127	8291
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8295	24.586	NaN	12835	30	0	2523.6	0.106	+			13222	GIGTLAENLL	10	84	334.1941281769396	999.5605551310189	3	334.1943054199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GIGTLAENLL_	ENSG00000127481|ENST00000375254|UBR4;nc|ENSG00000127481|Q5T4S7-2|UBR4;nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000127481|Q5T4S7-4|UBR4;UBR4|p.L4771Cfs*7|1|0.25|ENSG00000127481|chr1:19088878-19088878|G/-|frameshift_variant	29.14955571784316	0.6417842315402807	2				NaN	NaN	0	NaN	5166	3127	8291
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8296	24.588	NaN	12411	30	0	1144	0.106			+	27481	MLVGPTPPKG	10	78	498.78085063828996	995.54714834338	2	498.7806091308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MLVGPTPPKG_	REV__ENSG00000254585|ENST00000650528|MAGEL2;REV__MAGEL2|p.Q666Sfs*36|2|0.5|ENSG00000254585|chr15:23645747-23645747|G/-|frameshift_variant	42.33807565288922	0.5276008846745733	2				NaN	NaN	0	NaN	5167	3127	8291
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8297	24.589	NaN	15475	30	0	1511.1	0.039			+	10361	ETVVLRDRLPS	11	91	642.8668800197058	1283.7192071062116	2	642.8671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ETVVLRDRLPS_	REV__ENSG00000185453|ENST00000614654|ZSWIM9;REV__nc|ENSG00000185453|Q86XI8|ZSWIM9	56.43379154798735	0.3552884390983883	2				NaN	NaN	0	NaN	5168	3127	8291
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8298	24.59	NaN	10176	30	0	1532	0.14	+			1630	AGMTVRSI	8	80	417.7289094025478	833.4432658718956	2	417.7285461425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AGMTVRSI_	ENST00000494623.1_1_2:86734536-86737699:-|nuORF	79.45101966838831	0.3281480470254892	2				NaN	NaN	0	NaN	5169	3127	8291
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8311	24.62	NaN	27031	30	0	3440.4	0.214	+			35864	SEDLNKHVL	9	96	527.7794000382972	1053.5442471433944	2	527.7799682617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEDLNKHVL_	ENSG00000171940|ENST00000371471|ZNF217;ZNF217|p.A693Lfs*10|1|0.48|ENSG00000171940|chr20:53576687-53576687|C/-|frameshift_variant;ZNF217|p.F480Sfs*35|1|0.41|ENSG00000171940|chr20:53578378-53578378|A/-|frameshift_variant	93.19546047674547	0.05585629608842056	2				NaN	NaN	0	NaN	5179	3130	8310
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8312	24.624	NaN	10640	30	0	1622.8	0.106	+			24901	LKMGMETL	8	66	477.73538102388466	953.4562091145693	2	477.7353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Oxidation (M)	_LKM(Oxidation (M))GM(Oxidation (M))ETL_	ENSG00000166387|ENST00000299492|PPFIBP2;ENST00000532416.1_1_11:7647064-7652277:+|nuORF;nc|ENSG00000166387|Q8ND30-2|PPFIBP2;nc|ENSG00000166387|Q8ND30-3|PPFIBP2	94.00642277110589	0.2653416297186628	2				NaN	NaN	0	NaN	5180	3130	8310
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8313	24.626	NaN	8746.2	30	0	1025.5	0.106	+			45234	TVPQGHAGY	9	74	465.22758767103505	928.4406224088701	2	465.22723388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVPQGHAGY_	PCDH17|p.C832Y|1|0.5|ENSG00000118946|chr13:57635041-57635041|G/A|missense_variant	82.30502934623384	0.08758161712619916	2				NaN	NaN	0	NaN	5181	3130	8310
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8314	24.628	NaN	7540	30	0	853.35	0.106	+			42843	TEEQVQRSL	9	73	545.2802435129552	1088.5459340927102	2	545.2805786132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TEEQVQRSL_	ENSG00000261150|ENST00000615648|EPPK1;EPPK1|p.G2015Vfs*36|2|0.33|ENSG00000261150|chr8:143867210-143867210|C/-|frameshift_variant;EPPK1|p.L1122I|1|0.14|ENSG00000261150|chr8:143869890-143869890|G/T|missense_variant	66.96192283764107	0.15557981141143568	2				NaN	NaN	0	NaN	5182	3130	8310
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8315	24.63	NaN	8359.1	30	0	901.73	0.106	+			5995	AVLVETIKK	9	69	500.8236737171265	999.632794501053	2	500.8236389160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVLVETIKK_	CLASP2|p.L1169Ffs*6|1|0.14|ENSG00000163539|chr3:33510729-33510730|-/A|frameshift_variant;CLASP2|p.M744Nfs*4|1|0.19|ENSG00000163539|chr3:33560868-33560869|-/T|frameshift_variant;CLASP2|p.M744Wfs*33|2|0.29|ENSG00000163539|chr3:33560869-33560869|T/-|frameshift_variant;ENSG00000163539|ENST00000682230|CLASP2;nc|ENSG00000163539|O75122-2|CLASP2;nc|ENSG00000163539|O75122-3|CLASP2;nc|ENSG00000163539|O75122|CLASP2	49.44154591367651	0.3095138337212152	2				NaN	NaN	0	NaN	5183	3130	8310
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8316	24.631	NaN	11719	30	0	1314.1	0.106	+			40130	STQDTLLIKK	10	82	573.8403382397601	1145.66612354632	2	573.84033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STQDTLLIKK_	ENSG00000101825|ENST00000217939|MXRA5;MXRA5|p.Q2683Kfs*44|1|0.34|ENSG00000101825|chrX:3310156-3310156|G/-|frameshift_variant	62.166158670854095	0.3461392669251714	2				NaN	NaN	0	NaN	5184	3130	8310
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8317	24.633	NaN	9632.4	30	0	1754.9	0.036			+	23481	LAFERNRL	8	61	340.19769233578415	1017.5712476075526	3	340.1978759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LAFERNRL_	REV__ENSG00000169641|ENST00000302291|LUZP1;REV__LUZP1|p.F744Lfs*22|1|0.36|ENSG00000169641|chr1:23092030-23092030|A/-|frameshift_variant;REV__LUZP1|p.P479Rfs*22|2|0.4|ENSG00000169641|chr1:23092826-23092826|G/-|frameshift_variant;REV__LUZP1|p.T938Nfs*5|1|0.29|ENSG00000169641|chr1:23091451-23091452|-/G|frameshift_variant;REV__LUZP1|p.V674Gfs*16|1|0.33|ENSG00000169641|chr1:23092241-23092242|-/C|frameshift_variant;REV__nc|ENSG00000169641|Q86V48-2|LUZP1;REV__nc|ENSG00000169641|Q86V48-3|LUZP1	26.79610172149135	0.7524337208463756	2				NaN	NaN	0	NaN	5185	3130	8310
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8331	24.663	NaN	26795	30	0	2853.2	0.214	+			36137	SEKRMKLTL	9	97	369.2176667211509	1104.6311707636528	3	369.2179870605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEKRMKLTL_	ENSG00000143799|ENST00000366794|PARP1;ENST00000413631.1_1_13:111590511-111591024:+|nuORF;PARP1|p.T799Lfs*41|1|0.39|ENSG00000143799|chr1:226367491-226367491|T/-|frameshift_variant	72.87924865735499	0.12833875048249987	2				NaN	NaN	0	NaN	5196	3133	8330
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8332	24.667	NaN	18445	30	0	2111.6	0.106	+			40035	STMVDVRVMKK	11	84	647.3539700707491	1292.6933872082982	2	647.3543090820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STMVDVRVMKK_	ENSG00000085224|ENST00000373344|ATRX;nc|ENSG00000085224|P46100-2|ATRX;nc|ENSG00000085224|P46100-3|ATRX;nc|ENSG00000085224|P46100-4|ATRX;nc|ENSG00000085224|P46100-5|ATRX	158.0797617992652	5.705778136648917E-05	2				NaN	NaN	0	NaN	5197	3133	8330
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8333	24.669	NaN	19641	30	0	2329.8	0.106	+			26134	LSPRYDPDSG	10	93	553.7593435882733	1105.5041342433465	2	553.7593994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSPRYDPDSG_	TRIM46|p.I626L|1|0.27|ENSG00000163462|chr1:155182139-155182139|A/C|missense_variant	75.04331003522576	0.23611669241777622	2				NaN	NaN	0	NaN	5198	3133	8330
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8334	24.67	NaN	33351	30	0	8987.9	0.106	+			48458	VTLHREFPA	9	89	357.1976125450259	1068.5710082352778	3	357.1977844238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTLHREFPA_	ENSG00000104213|ENST00000251630|PDGFRL	51.19269402634007	0.2889735674168909	2				NaN	NaN	0	NaN	5199	3133	8330
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8335	24.672	NaN	6799.6	30	0	1197.3	0.106	+			6249	AVSKDEAVML	10	70	354.85460381579026	1061.5419820475709	3	354.8546447753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVSKDEAVML_	ENSG00000123684|ENST00000366997|LPGAT1;ENST00000498690.1_1_1:211952359-211966533:-|nuORF	45.97224482568171	0.49411383603842696	2				NaN	NaN	0	NaN	5200	3133	8330
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8336	24.674	NaN	13417	30	0	6208.1	0.041	+			24963	LLAQKVRPRRW	11	67	474.9645174435435	1421.8717229308306	3	475.2985534667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LLAQKVRPRRW_	ENSG00000116726|ENST00000357726|PRAMEF12;ENSG00000204480|ENST00000376101|PRAMEF19;ENSG00000279804|ENST00000624297|PRAMEF18	6.320883175729509	0.8408918793690873	2				NaN	NaN	0	NaN	5201	3133	8330
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8337	24.675	NaN	6601.6	30	0	779.4	0.14	+			36932	SILGPGNIKK	10	77	513.8187987147228	1025.6230444962455	2	513.8187255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SILGPGNIKK_	ENSG00000138592|ENST00000307179|USP8;USP8|p.K997Rfs*2|1|0.11|ENSG00000138592|chr15:50497178-50497178|A/-|frameshift_variant;USP8|p.N476Tfs*19|1|0.31|ENSG00000138592|chr15:50481683-50481683|A/-|frameshift_variant;USP8|p.R138Kfs*14|1|0.27|ENSG00000138592|chr15:50459070-50459071|-/A|frameshift_variant	56.43379154798735	0.3982744522255666	2				NaN	NaN	0	NaN	5202	3133	8330
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8349	24.703	NaN	10372	30	0	1669.7	0.214	+			30735	QDLIPDVLQ	9	88	520.7861777755335	1039.5578026178669	2	520.7855224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QDLIPDVLQ_	ENSG00000160949|ENST00000409379|TONSL;ENST00000497613.2_1_8:145658938-145666334:-|nuORF;nc|ENSG00000160949|Q96HA7-2|TONSL	75.04331003522576	0.118981335847003	2				NaN	NaN	0	NaN	5211	3136	8348
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8350	24.706	NaN	15317	30	0	4557.4	0.106			+	41021	SVHAEGLAPL	10	73	331.85011280094614	992.5285090030384	3	331.8502502441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVHAEGLAPL_	REV__ENSG00000070047|ENST00000264555|PHRF1;REV__nc|ENSG00000070047|Q9P1Y6-2|PHRF1;REV__nc|ENSG00000070047|Q9P1Y6-3|PHRF1;REV__PHRF1|p.L1393Cfs*8|1|0.38|ENSG00000070047|chr11:609628-609628|C/-|frameshift_variant	35.61828744233558	0.588957954432594	2				NaN	NaN	0	NaN	5212	3136	8348
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8351	24.708	NaN	10824	30	0	1828.4	0.106			+	38967	SSRLHTRPS	9	78	347.52537705247397	1039.554301757622	3	347.5254821777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSRLHTRPS_	REV__ENST00000313349.3_1_2:64861451-64861622:-|nuORF	37.15910966729921	0.4535818937225704	2				NaN	NaN	0	NaN	5213	3136	8348
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8352	24.71	NaN	10952	30	0	1923	0.106	+			16721	HLFNGGKP	8	76	435.2351147906506	868.4556766481012	2	435.2349853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HLFNGGKP_	ENST00000483414.1_1_7:73511493-73523492:+|nuORF	35.200714571348534	0.6875396545722289	2				NaN	NaN	0	NaN	5214	3136	8348
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8353	24.712	NaN	7647.2	30	0	809.85	0.106	+			39881	STLPRISLK	9	70	507.81876507041625	1013.6229772076325	2	507.81890869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STLPRISLK_	BRCA2|p.E3316Rfs*11|1|0.3|ENSG00000139618|chr13:32398452-32398453|-/A|frameshift_variant;BRCA2|p.T2685Hfs*9|1|0.05|ENSG00000139618|chr13:32363251-32363251|A/-|frameshift_variant;ENSG00000139618|ENST00000380152|BRCA2	53.59686742100583	0.26699147868981316	2				NaN	NaN	0	NaN	5215	3136	8348
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8354	24.714	NaN	6612.4	30	0	1141.7	0.106				-1	 	0	72	384.7720451196625	767.529537306125	2	384.7721862792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5216	3136	8348
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8355	24.716	NaN	4068.3	30	0	507.66	0.033	+			47310	VNSVKIPV	8	64	428.2685899687975	854.5226270043951	2	428.26837158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VNSVKIPV_	tr|U7SIM9|U7SIM9_FUSNUThiamine-phosphatesynthaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=thiEPE=3SV=1	51.33545320467046	0.5859736979383976	2				NaN	NaN	0	NaN	5217	3136	8348
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8371	24.749	NaN	30893	30	0	3686.8	0.214	+			39969	STMGYMMAKK	10	102	574.2691662031982	1146.5237794731963	2	574.269287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STMGYMMAKK_	ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;ENST00000518337.1_1_8:74128289-74128592:-|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P	75.04331003522576	0.23611669241777622	2				NaN	NaN	0	NaN	5230	3139	8370
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8372	24.753	NaN	10698	30	0	2239.7	0.106	+			23161	KVYNGILEK	9	73	532.3112373947309	1062.6079218562618	2	532.311279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVYNGILEK_	ENSG00000109689|ENST00000467087|STIM2;ENST00000467011.5_1_4:27022655-27024615:+|nuORF;nc|ENSG00000109689|Q9P246-2|STIM2;STIM2|p.S735Lfs*9|1|0.08|ENSG00000109689|chr4:27022958-27022959|-/TGTA|frameshift_variant	101.25262130126117	0.03792372629710479	2				NaN	NaN	0	NaN	5231	3139	8370
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8373	24.755	NaN	18562	30	0	2195.9	0.106	+			42198	TAAETHYTY	9	87	528.7355030791898	1055.4564532251795	2	528.7355346679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TAAETHYTY_	ENSG00000158773|ENST00000368021|USF1;ENST00000491629.5_1_1:161011414-161013065:-|nuORF;ENST00000529476.1_1_1:161011414-161013065:-|nuORF;nc|ENSG00000158773|P22415-2|USF1;USF1|p.G130Vfs*33|3|0.3|ENSG00000158773|chr1:161041734-161041734|C/-|frameshift_variant	116.90359126533652	0.02307425081617795	2				NaN	NaN	0	NaN	5232	3139	8370
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8374	24.757	NaN	32601	30	0	4254.1	0.106				-1	 	0	87	671.3784799872733	1340.7424070413465	2	671.3777465820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5233	3139	8370
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8375	24.758	NaN	23901	30	0	2806.7	0.106	+			15264	GTTHNFLYK	9	87	540.7790412889761	1079.5435296447522	2	540.7802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTTHNFLYK_	ENSG00000105499|ENST00000599921|PLA2G4C;ENST00000596510.5_1_19:48556252-48575644:-|nuORF;ENST00000599239.5_1_19:48565437-48599986:-|nuORF;nc|ENSG00000105499|Q9UP65-2|PLA2G4C;nc|ENSG00000105499|Q9UP65-3|PLA2G4C	49.536043120802724	0.308405419312776	2				NaN	NaN	0	NaN	5234	3139	8370
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8376	24.76	NaN	13494	30	0	5538.7	0.037			+	51404	YTPQTKQLI	9	75	364.54057415079484	1090.5998930525845	3	364.54119873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YTPQTKQLI_	REV__ENSG00000186416|ENST00000688521|NKRF;REV__nc|ENSG00000186416|O15226-2|NKRF;REV__nc|ENSG00000186416|O15226|NKRF;REV__NKRF|p.R664Dfs*7|1|0.22|ENSG00000186416|chrX:119589435-119589435|T/-|frameshift_variant	35.61828744233558	0.47037581924408073	2				NaN	NaN	0	NaN	5235	3139	8370
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8377	24.761	NaN	7511.7	30	0	1465.2	0.141	+			20860	KIMKDILEK	9	73	559.3361367015872	1116.6577204699743	2	559.33642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KIMKDILEK_	ENSG00000080824|ENST00000216281|HSP90AA1;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1	72.2432373244024	0.13108886737667413	2				NaN	NaN	0	NaN	5236	3139	8370
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8391	24.792	NaN	138800	30	0	13453	0.146	+			49633	VYIEKNDKL	9	79	561.3134915845094	1120.6124302358187	2	561.3136596679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYIEKNDKL_	ENSG00000065361|ENST00000267101|ERBB3;ENST00000546884.1_1_12:56474084-56480451:+|nuORF;ENST00000549472.1_1_12:56480319-56481575:+|nuORF;ERBB3|p.A805Gfs*22|1|0.1|ENSG00000065361|chr12:56097177-56097178|-/G|frameshift_variant;ERBB3|p.A805Hfs*95|1|0.33|ENSG00000065361|chr12:56097178-56097178|G/-|frameshift_variant;ERBB3|p.R1080Vfs*22|1|0.14|ENSG00000065361|chr12:56101093-56101093|C/-|frameshift_variant;nc|ENSG00000065361|P21860-3|ERBB3;nc|ENSG00000065361|P21860-4|ERBB3	195.04605151776784	5.427472092243166E-05	2				NaN	NaN	0	NaN	5247	3142	8390
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8392	24.795	NaN	11004	30	0	1710	0.106	+			19385	KAMEAASSL	9	67	454.2312475549782	906.4479421767564	2	454.2311706542969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KAMEAASSL_	ENSG00000109685|ENST00000508803|NSD2;nc|ENSG00000109685|O96028-3|NSD2;nc|ENSG00000109685|O96028-5|NSD2	109.47833844074708	0.029530294723441826	2				NaN	NaN	0	NaN	5248	3142	8390
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8393	24.797	NaN	13528	30	0	1095.9	0.106	+			29134	NVADLHEKY	9	88	544.7724830670339	1087.5304132008678	2	544.2719116210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NVADLHEKY_	ENSG00000100804|ENST00000361611|PSMB5;ENST00000493471.2_1_14:23495300-23497005:-|nuORF;nc|ENSG00000100804|P28074-3|PSMB5	72.2432373244024	0.13108886737667413	2				NaN	NaN	0	NaN	5249	3142	8390
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8394	24.799	NaN	9094.4	30	0	1558.6	0.106	+			25761	LSAGRPNL	8	75	414.24047240266617	826.4663918721324	2	414.240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSAGRPNL_	ENSG00000182095|ENST00000430969|TNRC18;ENSG00000266074|ENST00000675386|BAHCC1;nc|ENSG00000266074|Q9P281|BAHCC1	79.9392285194092	0.32408006123154964	2				NaN	NaN	0	NaN	5250	3142	8390
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8395	24.8	NaN	6512.7	30	0	1541.2	0.106	+			38924	SSPVVHQSL	9	63	477.2558277711805	952.4971026091611	2	477.2559814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSPVVHQSL_	ENSG00000152104|ENST00000366956|PTPN14;PTPN14|p.M845Rfs*2|1|0.04|ENSG00000152104|chr1:214383321-214383322|-/TC|frameshift_variant	49.536043120802724	0.308405419312776	2				NaN	NaN	0	NaN	5251	3142	8390
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8396	24.802	NaN	5290.3	30	0	1016.9	0.106			+	-1	IGYMLLAMV	9	77	342.85140599691823	NaN	0	342.85150146484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_IGYMLLAM(Oxidation (M))V_	REV__ENSG00000168575|ENST00000520262|SLC20A2	29.14955571784316	0.3303970763161698	2				NaN	NaN	0	NaN	5252	3142	8390
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8397	24.804	NaN	7051.2	30	0	1015.3	0.038			+	51346	YSSSDSNLLSF	11	72	610.2771222658772	1218.5396915985543	2	610.7796020507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YSSSDSNLLSF_	REV__nc|ENSG00000258628|A8MT19|RHPN2P1	46.45678178249821	0.46959456050452836	2				NaN	NaN	0	NaN	5253	3142	8390
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8409	24.83	NaN	227660	30	0	64359	0.166	+			29136	NVADLHEKY	9	96	363.51698857018584	1087.5291363107576	3	363.5171203613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NVADLHEKY_	ENSG00000100804|ENST00000361611|PSMB5;ENST00000493471.2_1_14:23495300-23497005:-|nuORF;nc|ENSG00000100804|P28074-3|PSMB5	52.936696900407355	0.27249468807391813	2				NaN	NaN	0	NaN	5262	3145	8408
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8410	24.833	NaN	52160	30	0	7951.8	0.106	+			29135	NVADLHEKY	9	99	544.7724830670339	1087.5304132008678	2	544.7725219726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NVADLHEKY_	ENSG00000100804|ENST00000361611|PSMB5;ENST00000493471.2_1_14:23495300-23497005:-|nuORF;nc|ENSG00000100804|P28074-3|PSMB5	140.11223852658463	0.010427410095706195	2				NaN	NaN	0	NaN	5263	3145	8408
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8411	24.835	NaN	41571	30	0	17572	0.106	+			19847	KEEHEVAVL	9	94	527.282585202476	1052.5506174717518	2	527.2824096679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEEHEVAVL_	ENSG00000142089|ENST00000399808|IFITM3;ENSG00000185885|ENST00000408968|IFITM1;IFITM1|p.S16Afs*9|1|0.39|ENSG00000185885|chr11:314210-314210|C/-|frameshift_variant	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	5264	3145	8408
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8412	24.837	NaN	16522	30	0	3492.3	0.106	+			576	ADILHYSG	8	82	438.21651994019555	874.4184869471911	2	438.2162170410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ADILHYSG_	ENSG00000188167|ENST00000342462|TMPPE;nc|ENSG00000188167|Q6ZT21-2|TMPPE	60.29395666154354	0.49887135096048313	2				NaN	NaN	0	NaN	5265	3145	8408
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8413	24.839	NaN	16489	30	0	1322.5	0.106	+			41554	SVQEGIKFK	9	78	518.2953336286762	1034.5761143241523	2	518.2953491210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVQEGIKFK_	ENSG00000128059|ENST00000264220|PPAT;ENST00000425339.2_1_4:57261520-57265668:-|nuORF	123.20810148215591	0.019257656778428764	2				NaN	NaN	0	NaN	5266	3145	8408
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8414	24.84	NaN	13912	30	0	1805.5	0.106				-1	 	0	88	336.5340769935905	1006.5804015809715	3	336.5341491699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5267	3145	8408
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8415	24.842	NaN	35546	30	0	3382	0.037	+			17665	IEKKYDEEL	9	92	583.8009089149577	1165.5872648967154	2	583.800537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IEKKYDEEL_	ENSG00000149591|ENST00000392951|TAGLN;ENST00000533863.1_2_11:117073729-117073927:+|nuORF	159.33581866081465	0.004693099277440949	2				NaN	NaN	0	NaN	5268	3145	8408
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8427	24.868	NaN	36026	30	0	13647	0.214			+	37727	SLTFAHNRVA	10	80	372.53649747610854	1114.5876630285256	3	372.5366516113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLTFAHNRVA_	REV__PLCD3|p.D416N|1|0.12|ENSG00000161714|chr17:45118008-45118008|C/T|missense_variant	47.95952297671804	0.47580206326914537	2				NaN	NaN	0	NaN	5277	3148	8426
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8428	24.872	NaN	30510	30	0	6465	0.106	+			42548	TASAVVQHM	9	93	472.23705522040547	942.459557507611	2	472.2368469238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TASAVVQHM_	ENSG00000115524|ENST00000335508|SF3B1	143.8867514904718	0.008656634767784652	2				NaN	NaN	0	NaN	5278	3148	8426
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8429	24.874	NaN	19110	30	0	7716.4	0.106			+	-1	MLIGVCPTIF	10	67	389.53629599207295	1165.587058576419	3	389.53619384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))LIGVC(Carbamidomethyl (C))PTIF_	REV__ENSG00000174669|ENST00000357440|SLC29A2;REV__nc|ENSG00000174669|Q14542-3|SLC29A2;REV__nc|ENSG00000174669|Q14542-4|SLC29A2	60.11826168202944	0.36476464221954025	2				NaN	NaN	0	NaN	5279	3148	8426
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8430	24.876	NaN	19961	30	0	1421.9	0.106	+			39656	STIFHVQQR	9	87	558.3028197011878	1114.5910864691755	2	558.302001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STIFHVQQR_	ENSG00000176920|ENST00000425340|FUT2	109.43880257439609	0.029570636687953285	2				NaN	NaN	0	NaN	5280	3148	8426
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8431	24.877	NaN	17376	30	0	10885	0.106	+			46730	VGPPGRSSL	9	70	435.2455822466669	868.4766115601338	2	435.2453308105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VGPPGRSSL_	ENSG00000102900|ENST00000308159|NUP93;nc|ENSG00000102900|Q8N1F7-2|NUP93;NUP93|p.F699Lfs*19|1|0.34|ENSG00000102900|chr16:56839025-56839025|T/-|frameshift_variant	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	5281	3148	8426
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8432	24.879	NaN	33129	30	0	7361.7	0.106				-1	LVCKFSISPV	10	94	383.88259758055676	1148.6259633418704	3	383.8825988769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_LVC(Carbamidomethyl (C))KFSISPV_	ENST00000370620.5_1_X:135749294-135749660:-|nuORF	28.081489160057373	0.6505064946289502	2				NaN	NaN	0	NaN	5282	3148	8426
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8433	24.881	NaN	14335	30	0	2947.1	0.036				-1	ISFRIWMC	8	87	357.8414363524822	1070.5024796576467	3	357.8415832519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_ISFRIWM(Oxidation (M))C_	ENSG00000178234|ENST00000430044|GALNT11;ENST00000491061.1_1_7:151805139-151814490:+|nuORF	29.14955571784316	0.7342621283720113	2				NaN	NaN	0	NaN	5283	3148	8426
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8445	24.907	NaN	24806	30	0	3414.8	0.214	+			38912	SSPPSPSVSSE	11	73	530.7438772984746	1059.473201663749	2	530.744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSPPSPSVSSE_	ENSG00000125089|ENST00000245105|SH3TC1;ENST00000515682.5_1_4:8207046-8242679:+|nuORF	45.97224482568171	0.4762245054624163	2				NaN	NaN	0	NaN	5292	3151	8444
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8446	24.911	NaN	20754	30	0	3177.6	0.106	+			41633	SVQSDQGYISR	11	93	620.3019715559229	1238.5893901786458	2	620.302001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVQSDQGYISR_	ENSG00000177663|ENST00000319363|IL17RA;nc|ENSG00000177663|Q96F46-2|IL17RA	163.46403022179925	4.564038370676518E-05	2				NaN	NaN	0	NaN	5293	3151	8444
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8447	24.913	NaN	17749	30	0	2547.1	0.106	+			15688	GVMTVLIKR	9	85	516.8154594498485	1031.616365966497	2	516.8156127929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_GVM(Oxidation (M))TVLIKR_	ENSG00000109971|ENST00000534624|HSPA8;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;HSPA8|p.K569Dfs*6|1|0.3|ENSG00000109971|chr11:123058302-123058303|TC/-|frameshift_variant;nc|ENSG00000109971|P11142-2|HSPA8	74.25504064058377	0.12238981753128622	2				NaN	NaN	0	NaN	5294	3151	8444
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8448	24.915	NaN	10273	30	0	1552.5	0.106			+	-1	LCMGRAVLKR	10	81	623.3486497549554	1244.6827465767108	2	623.3492431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))LC(Carbamidomethyl (C))MGRAVLKR_	REV__ENST00000338946.10_1_X:54040912-54040951:-|nuORF	64.20726635412375	0.3275756395432415	2				NaN	NaN	0	NaN	5295	3151	8444
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8449	24.916	NaN	15111	30	0	3407.7	0.106	+			22552	KTSAHSQRAL	10	76	549.8044321684853	1097.5943114037705	2	549.8047485351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KTSAHSQRAL_	ENSG00000155719|ENST00000646100|OTOA;nc|ENSG00000155719|Q7RTW8-4|OTOA;nc|ENSG00000155719|Q7RTW8|OTOA	54.722347961057174	0.4138398245444204	2				NaN	NaN	0	NaN	5296	3151	8444
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8450	24.918	NaN	10468	30	0	955.37	0.106	+			19918	KEFEDKKVEL	10	87	632.8423400499233	1263.6701271666466	2	632.8429565429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KEFEDKKVEL_	ENSG00000111707|ENST00000543473|SUDS3	141.88618038797316	0.010251192423762169	2				NaN	NaN	0	NaN	5297	3151	8444
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8451	24.92	NaN	10858	30	0	1288.8	0.034	+			1583	AGITGTNVVK	10	75	480.27971484476046	958.544876756321	2	480.2796325683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AGITGTNVVK_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	109.43880257439609	0.049666173740610824	2				NaN	NaN	0	NaN	5298	3151	8444
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8462	24.946	NaN	43013	30	0	4224.7	0.214	+			23595	LANGQTKVL	9	77	472.2822499597721	942.5499469863443	2	472.2818908691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LANGQTKVL_	ENSG00000265972|ENST00000582401|TXNIP;ENST00000488537.1_1_1:145440216-145440639:+|nuORF;nc|ENSG00000265972|Q9H3M7-2|TXNIP	120.8684288430529	0.02067403653475984	2				NaN	NaN	0	NaN	5306	3154	8461
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8463	24.95	NaN	17640	30	0	4416.9	0.106			+	22482	KTNDKEDQEQ	10	96	617.7812822791311	1233.5480116250621	2	617.7815551757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTNDKEDQEQ_	REV__ENSG00000109255|ENST00000264218|NMU;REV__ENST00000515325.5_1_4:56465315-56502750:-|nuORF	114.8945686534367	0.03454040281423369	2				NaN	NaN	0	NaN	5307	3154	8461
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8464	24.952	NaN	23306	30	0	4422.7	0.106	+			18316	IPTKQTQTF	9	87	532.292997045153	1062.571441157106	2	532.293212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IPTKQTQTF_	ENSG00000109971|ENST00000534624|HSPA8;ENSG00000126803|ENST00000247207|HSPA2;ENSG00000173110|ENST00000309758|HSPA6;ENST00000397642.3_1_1:247394123-247394771:+|nuORF;ENST00000425843.1_1_X:120337248-120337797:-|nuORF;ENST00000445535.1_1_1:161576981-161578004:+|nuORF;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;ENST00000552265.2_1_12:111822376-111823062:+|nuORF;HSPA6|p.D632Gfs*9|1|0.12|ENSG00000173110|chr1:161526547-161526548|-/G|frameshift_variant;HSPA8|p.K569Dfs*6|1|0.3|ENSG00000109971|chr11:123058302-123058303|TC/-|frameshift_variant;nc|ENSG00000109971|P11142-2|HSPA8	132.757866228626	0.013877640931359021	2				NaN	NaN	0	NaN	5308	3154	8461
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8465	24.954	NaN	9251	30	0	1184.5	0.106	+			39519	STFRDTSV	8	55	456.7247138137039	911.4348746942078	2	456.724365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STFRDTSV_	ENST00000562955.2_2_1:43917983-43918262:+|nuORF	73.97473282117947	0.3737790450121076	2				NaN	NaN	0	NaN	5309	3154	8461
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8466	24.955	NaN	14242	30	0	2145.6	0.106	+			32931	REAEQSNVAL	10	72	558.7860719996953	1115.5575910661905	2	558.7862548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_REAEQSNVAL_	ENSG00000143367|ENST00000368849|TUFT1;nc|ENSG00000143367|Q9NNX1-2|TUFT1;nc|ENSG00000143367|Q9NNX1-3|TUFT1	59.93077597824379	0.36646980200755325	2				NaN	NaN	0	NaN	5310	3154	8461
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8467	24.957	NaN	8818.4	30	0	1177.4	0.106			+	18735	ITHFVTSVVF	10	72	575.3202764027291	1148.625999872258	2	575.3207397460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ITHFVTSVVF_	REV__ENSG00000136297|ENST00000401401|MMD2;REV__nc|ENSG00000136297|Q8IY49-3|MMD2;REV__nc|ENSG00000136297|Q8IY49|MMD2	53.351449002276354	0.42630798468005626	2				NaN	NaN	0	NaN	5311	3154	8461
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8468	24.959	NaN	9446.1	30	0	1463.2	0.034	+			42907	TEHPSPSPL	9	69	482.7407253921635	963.466897851127	2	482.7401428222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TEHPSPSPL_	nc|ENSG00000092199|P07910|HNRNPC	66.42927471994793	0.16001998865088202	2				NaN	NaN	0	NaN	5312	3154	8461
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8480	24.985	NaN	9280.1	30	0	1195.5	0.214	+			25985	LSKDDTSPP	9	74	480.23861142589885	958.4626699185977	2	480.2374267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSKDDTSPP_	ARHGAP21|p.D1617Tfs*32|1|0.1|ENSG00000107863|chr10:24585440-24585440|C/-|frameshift_variant;ARHGAP21|p.I1365Rfs*23|1|0.25|ENSG00000107863|chr10:24591280-24591281|TA/-|frameshift_variant;ARHGAP21|p.K1443*|1|0.33|ENSG00000107863|chr10:24585962-24585963|-/A|frameshift_variant;ENSG00000107863|ENST00000396432|ARHGAP21;ENST00000401578.2_1_6:80776237-80776996:-|nuORF;nc|ENSG00000107863|Q5T5U3-3|ARHGAP21	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	5321	3157	8479
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8481	24.989	NaN	4537.6	30	0	801.59	0.106	+			20211	KELGSSTNAL	10	70	510.2720031592541	1018.5294533853082	2	510.2720947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KELGSSTNAL_	ENSG00000125870|ENST00000246071|SNRPB2;ENST00000478522.1_1_20:16710709-16713038:+|nuORF	39.873155843976775	0.5503138860789152	2				NaN	NaN	0	NaN	5322	3157	8479
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8482	24.991	NaN	8649.1	30	0	1970.2	0.106	+			10120	ESNFIQVK	8	81	482.75820282933154	963.5018527254631	2	482.7584533691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ESNFIQVK_	ENSG00000135248|ENST00000621392|GARIN1B;nc|ENSG00000135248|Q96KD3|GARIN1B	66.42927471994793	0.4381325844043345	2				NaN	NaN	0	NaN	5323	3157	8479
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8483	24.993	NaN	7780.1	30	0	853.83	0.106	+			5991	AVLTHSGFPAK	11	68	564.3138725877275	1126.6131922422549	2	564.314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVLTHSGFPAK_	ENSG00000181029|ENST00000596148|TRAPPC5	114.8945686534367	0.029994978926542827	2				NaN	NaN	0	NaN	5324	3157	8479
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8484	24.994	NaN	9180.7	30	0	1539.4	0.106			+	19333	KAISQEGLFV	10	96	546.3072373721296	1090.5999218110592	2	546.30908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KAISQEGLFV_	REV__RAB6C|p.V24I|1|0.28|ENSG00000222014|chr2:129980185-129980185|G/A|missense_variant	33.921630207806714	0.6028135429846169	2				NaN	NaN	0	NaN	5325	3157	8479
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8485	24.996	NaN	6359.8	30	0	1182.3	0.106			+	33808	RQQALFSRAP	10	69	587.3279690498472	1172.6413851664943	2	587.3280639648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RQQALFSRAP_	REV__ENSG00000134709|ENST00000371208|HOOK1;REV__ENST00000466803.1_1_1:60330814-60338634:+|nuORF;REV__nc|ENSG00000134709|Q9UJC3-2|HOOK1	36.446750945000026	0.5818864909973037	2				NaN	NaN	0	NaN	5326	3157	8479
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8486	24.998	NaN	4416.5	30	0	576.97	0.035			+	-1	HFMLGGGVVL	10	66	523.2802250473179	1044.5458971614357	2	523.2803955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_HFM(Oxidation (M))LGGGVVL_	REV__ENSG00000113812|ENST00000335754|ACTR8;REV__nc|ENSG00000113812|Q9H981-2|ACTR8;REV__nc|ENSG00000113812|Q9H981-3|ACTR8	54.76467175910256	0.41345489472286195	2				NaN	NaN	0	NaN	5327	3157	8479
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8497	25.023	NaN	12061	30	0	3085.6	0.214	+			14569	GTFQTTMTK	9	68	507.7495815883362	1013.4846102434724	2	507.75006103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTFQTTMTK_	ENSG00000085719|ENST00000517490|CPNE3;ENST00000517862.1_1_8:87552529-87557099:+|nuORF	96.66504779109242	0.04607440320619715	2				NaN	NaN	0	NaN	5335	3160	8496
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8498	25.027	NaN	7798.7	30	0	1737.6	0.106	+			12180	GAMGYGYEK	9	68	488.21558042116055	974.4166079091211	2	488.21551513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GAMGYGYEK_	ENSG00000175832|ENST00000319349|ETV4;nc|ENSG00000175832|P43268-2|ETV4;nc|ENSG00000175832|P43268-3|ETV4	93.19546047674547	0.05585629608842056	2				NaN	NaN	0	NaN	5336	3160	8496
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8499	25.029	NaN	13671	30	0	2726.7	0.106			+	44305	TSDLWTQAK	9	90	525.2670436831974	1048.5195344331946	2	525.2673950195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TSDLWTQAK_	REV__ENST00000543042.5_1_11:72091398-72145518:-|nuORF	51.33545320467046	0.2872990594074956	2				NaN	NaN	0	NaN	5337	3160	8496
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8500	25.031	NaN	7543.9	30	0	1133.9	0.106	+			51348	YSTGHSPAL	9	65	466.7272850697431	931.4400172062863	2	466.72705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YSTGHSPAL_	ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000126464|Q9ULL5-2|PRR12;PRR12|p.P506Lfs*44|1|0.33|ENSG00000126464|chr19:49599569-49599569|C/-|frameshift_variant;PRR12|p.R352Gfs*50|1|0.13|ENSG00000126464|chr19:49597847-49597847|G/-|frameshift_variant	90.77665401227738	0.06267569666681755	2				NaN	NaN	0	NaN	5338	3160	8496
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8501	25.033	NaN	10239	30	0	1266.8	0.106	+			13868	GQYGNPLNK	9	71	495.7542090718523	989.4938652105046	2	495.7537536621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GQYGNPLNK_	ADAM10|p.P631Lfs*17|1|0.5|ENSG00000137845|chr15:58610430-58610430|G/-|frameshift_variant;ENSG00000137845|ENST00000260408|ADAM10;ENST00000558733.5_1_15:58947546-59041769:-|nuORF;ENST00000560608.5_1_15:58971480-59041769:-|nuORF;ENST00000561149.1_1_15:58974496-59041769:-|nuORF	101.60071028292904	0.0375685401170269	2				NaN	NaN	0	NaN	5339	3160	8496
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8502	25.034	NaN	8936.5	30	0	1388.5	0.106	+			50474	YAHPSGTAL	9	71	458.72983527693674	915.4451176206735	2	458.729736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YAHPSGTAL_	ENSG00000196526|ENST00000420658|AFAP1;ENST00000513842.1_1_4:7765494-7800689:-|nuORF;nc|ENSG00000196526|Q8N556|AFAP1	79.9392285194092	0.09781135437301468	2				NaN	NaN	0	NaN	5340	3160	8496
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8503	25.036	NaN	5926.6	30	0	725.27	0.033	+			12716	GEKTAGINV	9	69	444.7432142136762	887.4718754941524	2	444.74273681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GEKTAGINV_	ENSG00000115484|ENST00000394440|CCT4;nc|ENSG00000115484|P50991-2|CCT4	61.691277971877994	0.19951612995419254	2				NaN	NaN	0	NaN	5341	3160	8496
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8518	25.067	NaN	9874.4	30	0	4532.3	0.214				-1	 	0	67	328.7092705597452	655.4039881862905	2	328.7093505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5353	3163	8517
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8519	25.071	NaN	11817	30	0	2029.2	0.106	+			9408	EKGTGAFK	8	62	419.22714679439827	836.4397406555966	2	419.2266845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EKGTGAFK_	ENST00000453426.1_1_6:32811904-32812045:+|nuORF	90.77665401227738	0.27511901818546464	2				NaN	NaN	0	NaN	5354	3163	8517
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8520	25.073	NaN	20208	30	0	3062.3	0.106	+			31538	QLLHNDEY	8	82	516.243410314329	1030.472267695458	2	516.2435913085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QLLHNDEY_	ENSG00000168883|ENST00000323701|USP39;ENST00000459775.5_1_2:85848673-85875928:+|nuORF;ENST00000493829.5_1_2:85843459-85872221:+|nuORF;nc|ENSG00000168883|Q53GS9-2|USP39;nc|ENSG00000168883|Q53GS9-3|USP39	73.97473282117947	0.3737790450121076	2				NaN	NaN	0	NaN	5355	3163	8517
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8521	25.075	NaN	7867.8	30	0	1567.2	0.106				-1	PCVCPDVGL	9	66	480.21945163896305	958.4243503447261	2	480.21917724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_PCVC(Carbamidomethyl (C))PDVGL_	ENST00000373616.9_1_6:36936345-36936543:-|nuORF	71.37791200682192	0.13483053934309522	2				NaN	NaN	0	NaN	5356	3163	8517
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8522	25.076	NaN	10270	30	0	3885.2	0.106			+	-1	RCRKVVSK	8	82	344.8731700641764	1031.5976807927293	3	344.8729553222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_RC(Carbamidomethyl (C))RKVVSK_	REV__ENSG00000155980|ENST00000455537|KIF5A	34.172542307311794	0.6954784234644539	2				NaN	NaN	0	NaN	5357	3163	8517
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8523	25.078	NaN	7654.8	30	0	3026.3	0.044				-1	VQFEIWCRYYY	11	84	813.8745350386333	1625.7345171440666	2	813.8713989257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_VQFEIWC(Carbamidomethyl (C))RYYY_	ENSG00000168014|ENST00000334126|C2CD3;nc|ENSG00000168014|Q4AC94-1|C2CD3;nc|ENSG00000168014|Q4AC94-2|C2CD3;nc|ENSG00000168014|Q4AC94-3|C2CD3;nc|ENSG00000168014|Q4AC94-4|C2CD3	5.220141733780809	0.8460459167827878	2				NaN	NaN	0	NaN	5358	3163	8517
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8524	25.079	NaN	10448	30	0	1803.1	0.143	+			40173	STQSLSLQR	9	75	510.27832003512015	1018.5420871370403	2	510.2792053222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STQSLSLQR_	ENSG00000187479|ENST00000617612|C11orf96;nc|nan|Q7Z7L8|C11orf96	70.39856735676683	0.13906523160059378	2				NaN	NaN	0	NaN	5359	3163	8517
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8537	25.109	NaN	29987	30	0	5487.1	0.214	+			14855	GTLMWHQMK	9	86	574.2728963438375	1146.5312397544749	2	574.273193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_GTLMWHQM(Oxidation (M))K_	ENST00000346169.6_1_3:184032401-184033585:+|nuORF;ENST00000352767.7_2_3:184032446-184033585:+|nuORF	95.81516180277367	0.04847050768394289	2				NaN	NaN	0	NaN	5369	3166	8536
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8538	25.112	NaN	29642	30	0	9708.7	0.106			+	-1	CRLTAPKVF	9	90	364.54057415079484	1090.5998930525845	3	364.5412292480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_C(Carbamidomethyl (C))RLTAPKVF_	REV__ENSG00000151690|ENST00000392328|MFSD6;REV__MFSD6|p.F499Lfs*8|2|0.17|ENSG00000151690|chr2:190437520-190437520|T/-|frameshift_variant;REV__MFSD6|p.L503Hfs*56|1|0.33|ENSG00000151690|chr2:190437536-190437555|CTTATTGAATTGATCGGCCA/-|frameshift_variant;REV__MFSD6|p.T170Kfs*10|1|0.04|ENSG00000151690|chr2:190436537-190436538|-/AAAGGGGG|frameshift_variant	24.519189625965996	0.574102787014149	2				NaN	NaN	0	NaN	5370	3166	8536
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8539	25.114	NaN	13012	30	0	1912.9	0.106	+			28554	NKAFASNL	8	77	432.7323033538684	863.4500537745369	2	432.732177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NKAFASNL_	ENSG00000063169|ENST00000594866|BICRA;nc|ENSG00000063169|Q9NZM4-2|BICRA	76.7741389293348	0.3504530765139327	2				NaN	NaN	0	NaN	5371	3166	8536
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8540	25.116	NaN	25670	30	0	11159	0.106				-1	 	0	70	322.1934682156843	642.3723834981686	2	322.1935729980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5372	3166	8536
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8541	25.118	NaN	12993	30	0	1744.6	0.106				-1	LERYMCSRFFI	11	94	769.3686441522683	1536.7227353713365	2	769.365478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C),Oxidation (M)	_LERYM(Oxidation (M))C(Carbamidomethyl (C))SRFFI_	ENSG00000174016|ENST00000308293|TENT5D;ENSG00000183508|ENST00000369448|TENT5C	14.693671053092006	0.8016877026820449	2				NaN	NaN	0	NaN	5373	3166	8536
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8542	25.12	NaN	7032.3	30	0	2873	0.034			+	-1	KQLHMLGQ	8	57	485.76086028382684	969.5071676344537	2	485.7608642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_KQLHM(Oxidation (M))LGQ_	REV__ENSG00000148948|ENST00000528697|LRRC4C;REV__LRRC4C|p.P562Qfs*34|1|0.35|ENSG00000148948|chr11:40114608-40114608|G/-|frameshift_variant	33.51558372728122	0.7005509609380386	2				NaN	NaN	0	NaN	5374	3166	8536
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8543	25.12	NaN	11927	30	0	1355.2	0.14	+			5106	ATSPIIIHR	9	83	504.3031942481633	1006.5918355631267	2	504.3033142089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATSPIIIHR_	ENSG00000135336|ENST00000392844|ORC3;nc|ENSG00000135336|Q9UBD5-2|ORC3;nc|ENSG00000135336|Q9UBD5-3|ORC3	52.936696900407355	0.27249468807391813	2				NaN	NaN	0	NaN	5375	3166	8536
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8560	25.157	NaN	25401	30	0	2033.6	0.214	+			35891	SEEVVSREV	9	92	517.261615595773	1032.508678258346	2	517.26171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEEVVSREV_	ENSG00000160789|ENST00000368300|LMNA;nc|ENSG00000160789|P02545-2|LMNA;nc|ENSG00000160789|P02545-3|LMNA;nc|ENSG00000160789|P02545-6|LMNA	114.8945686534367	0.024290463251177924	2				NaN	NaN	0	NaN	5389	3169	8559
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8561	25.161	NaN	32659	30	0	6930.2	0.106	+			15640	GVLGSSKVLAK	11	88	529.8322772041009	1057.6500014750018	2	529.8323974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GVLGSSKVLAK_	ENSG00000160216|ENST00000291572|AGPAT3;nc|ENSG00000160216|Q9NRZ7-2|AGPAT3;nc|ENSG00000160216|Q9NRZ7-3|AGPAT3	147.28045952906635	7.504075087960879E-05	2				NaN	NaN	0	NaN	5390	3169	8559
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8562	25.163	NaN	9170.1	30	0	2783.1	0.106	+			9650	ELSKAKEII	9	81	344.20848616691944	1029.6036291009584	3	344.2095031738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ELSKAKEII_	DST|p.K5076Nfs*24|1|0.31|ENSG00000151914|chr6:56472218-56472218|T/-|frameshift_variant;DST|p.T4428Nfs*23|1|0.12|ENSG00000151914|chr6:56497896-56497897|-/T|frameshift_variant;ENSG00000151914|ENST00000680361|DST;nc|ENSG00000151914|Q03001-9|DST;nc|ENSG00000151914|Q03001|DST	51.19269402634007	0.2889735674168909	2				NaN	NaN	0	NaN	5391	3169	8559
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8563	25.165	NaN	14544	30	0	1832.6	0.106	+			15302	GTVDPQELQK	10	83	557.7900825235055	1113.5656121138109	2	557.790771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTVDPQELQK_	ENSG00000075142|ENST00000265729|SRI;ENST00000472930.6_1_7:87835795-87839460:-|nuORF;ENST00000486860.5_1_7:87838471-87849341:-|nuORF;nc|ENSG00000075142|P30626-2|SRI;nc|ENSG00000075142|P30626-3|SRI	112.10723106719422	0.0417416748461292	2				NaN	NaN	0	NaN	5392	3169	8559
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8564	25.167	NaN	6427.6	30	0	1350.4	0.106	+			14130	GSLSIATEK	9	57	453.25038493219756	NaN	0	453.2503356933594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GSLSIATEK_	ENSG00000110077|ENST00000528851|MS4A6A;ENST00000525549.5_1_11:59945684-59950490:-|nuORF;ENST00000529906.5_1_11:59944867-59947426:-|nuORF;ENST00000530179.1_1_11:59945684-59950490:-|nuORF;MS4A6A|p.T185Sfs*29|1|0.24|ENSG00000110077|chr11:60173125-60173126|GT/-|frameshift_variant;nc|ENSG00000110077|Q9H2W1-3|MS4A6A;nc|ENSG00000110077|Q9H2W1-5|MS4A6A;nc|ENSG00000110077|Q9H2W1|MS4A6A	98.58198989935565	0.02429614701295995	2				NaN	NaN	0	NaN	5393	3169	8559
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8565	25.168	NaN	6790.4	30	0	853.22	0.037	+			37585	SLNQTVTQLQ	10	83	566.3039330616683	1130.5933131901365	2	566.3043823242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLNQTVTQLQ_	ENSG00000126777|ENST00000395314|KTN1;ENST00000554831.1_1_14:56146303-56146414:+|nuORF;nc|ENSG00000126777|Q86UP2-2|KTN1;nc|ENSG00000126777|Q86UP2-3|KTN1;nc|ENSG00000126777|Q86UP2-4|KTN1	90.60085204095205	0.12763388345653318	2				NaN	NaN	0	NaN	5394	3169	8559
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8566	25.169	NaN	2846.9	30	0	236.27	0.145			+	-1	MRKLCVLFL	9	61	380.22021575908826	1137.6388178774648	3	380.22039794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_M(Oxidation (M))RKLCVLFL_	REV__ENST00000366787.7_1_6:169617590-169617689:-|nuORF	35.61828744233558	0.47037581924408073	2				NaN	NaN	0	NaN	5395	3169	8559
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8581	25.202	NaN	24116	30	0	2522.1	0.214			+	-1	SILFRACPK	9	83	364.54057415079484	1090.5998930525845	3	364.8732604980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SILFRAC(Carbamidomethyl (C))PK_	REV__ENST00000535106.5_1_1:150039487-150039628:+|nuORF	35.15202426646627	0.4747332964206883	2				NaN	NaN	0	NaN	5407	3172	8580
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8582	25.206	NaN	13483	30	0	1451.9	0.106	+			3244	ASLELPAAKK	10	86	514.3110545717343	1026.6075562102685	2	514.3109741210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASLELPAAKK_	ENSG00000110172|ENST00000320585|CHORDC1;nc|ENSG00000110172|Q9UHD1-2|CHORDC1	82.7504851949679	0.1731497355276012	2				NaN	NaN	0	NaN	5408	3172	8580
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8583	25.208	NaN	11467	30	0	859.97	0.106	+			44685	TTIEEDKSVLK	11	84	631.8456338998071	NaN	0	631.8456420898438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TTIEEDKSVLK_	ENSG00000183576|ENST00000331768|SETD3	214.7054972689771	1.0121317754545508E-25	2				NaN	NaN	0	NaN	5409	3172	8580
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8584	25.21	NaN	18823	30	0	1443.8	0.106			+	9742	ENDMLGLKR	9	80	538.2804990094606	1074.5464450857212	2	538.2803344726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ENDMLGLKR_	REV__ENSG00000120889|ENST00000276431|TNFRSF10B;REV__ENST00000523504.5_1_8:22880186-22926453:-|nuORF;REV__ENST00000523752.5_1_8:22880186-22885396:-|nuORF;REV__nc|ENSG00000120889|O14763-2|TNFRSF10B	72.87924865735499	0.12833875048249987	2				NaN	NaN	0	NaN	5410	3172	8580
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8585	25.212	NaN	9172.6	30	0	1035.4	0.106	+			8868	EERPPAQAL	9	83	505.76685114904654	1009.5191493648931	2	505.766845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EERPPAQAL_	ENSG00000047849|ENST00000683076|MAP4;MAP4|p.R919Gfs*14|1|0.44|ENSG00000047849|chr3:47870917-47870917|G/-|frameshift_variant;MAP4|p.T960Qfs*35|1|0.3|ENSG00000047849|chr3:47869309-47869309|T/-|frameshift_variant;MAP4|p.V999*|1|0.25|ENSG00000047849|chr3:47867318-47867318|T/-|frameshift_variant;nc|ENSG00000047849|P27816-2|MAP4;nc|ENSG00000047849|P27816-5|MAP4;nc|ENSG00000047849|P27816-6|MAP4;nc|ENSG00000047849|P27816|MAP4	116.90359126533652	0.02307425081617795	2				NaN	NaN	0	NaN	5411	3172	8580
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8586	25.213	NaN	8336	30	0	955.01	0.035				-1	 	0	71	336.5340769935905	1006.5804015809715	3	336.5343322753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5412	3172	8580
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8587	25.214	NaN	11843	30	0	1328.1	0.142			+	45469	TYCLAHKKK	9	85	546.3072373721296	1090.5999218110592	2	546.806396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TYCLAHKKK_	REV__ENSG00000174175|ENST00000263686|SELP;REV__SELP|p.G727Ffs*17|1|0.04|ENSG00000174175|chr1:169594800-169594801|-/GTGGAAA|frameshift_variant;REV__SELP|p.G727Ifs*14|1|0.04|ENSG00000174175|chr1:169594799-169594800|CC/-|frameshift_variant	37.15910966729921	0.4535818937225704	2				NaN	NaN	0	NaN	5413	3172	8580
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8604	25.251	NaN	98546	30	0	14665	0.204	+			51244	YQHTGAVL	8	85	444.7322319251799	887.4499109171599	2	444.73211669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YQHTGAVL_	BUB3|p.I231Gfs*30|1|0.05|ENSG00000154473|chr10:123162349-123162350|-/GGTAA|frameshift_variant;ENSG00000154473|ENST00000368865|BUB3;nc|ENSG00000154473|O43684-2|BUB3	87.75429964447693	0.2842685068779738	2				NaN	NaN	0	NaN	5427	3175	8603
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8605	25.255	NaN	11861	30	0	949.83	0.106	+			3868	ATANMLGIRK	10	97	537.808081450409	1073.6016099676178	2	537.8084106445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATANMLGIRK_	ENSG00000166902|ENST00000300151|MRPL16	88.1336951990783	0.14175885391278442	2				NaN	NaN	0	NaN	5428	3175	8603
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8606	25.257	NaN	6704.2	30	0	2405	0.106	+			47994	VSPVSRQSI	9	76	486.77722324665933	971.5398935601187	2	486.7770080566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSPVSRQSI_	ENSG00000177106|ENST00000318562|EPS8L2;ENST00000526909.5_1_11:710402-726978:+|nuORF;ENST00000531393.5_1_11:721935-726978:+|nuORF;EPS8L2|p.V669Gfs*33|1|0.13|ENSG00000177106|chr11:726690-726690|T/-|frameshift_variant;nc|ENSG00000177106|Q9H6S3-2|EPS8L2;nc|ENSG00000177106|Q9H6S3-3|EPS8L2	70.8162118820467	0.13725933411854815	2				NaN	NaN	0	NaN	5429	3175	8603
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8607	25.259	NaN	25176	30	0	5713.3	0.106	+			2949	ASEAIKGAVVG	11	79	501.2849300907897	1000.5553072483794	2	501.2848205566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASEAIKGAVVG_	ENSG00000113013|ENST00000297185|HSPA9;ENST00000506477.5_1_5:137906647-137911007:-|nuORF	96.66504779109242	0.07148984068916604	2				NaN	NaN	0	NaN	5430	3175	8603
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8608	25.26	NaN	7266.2	30	0	730.16	0.106			+	-1	KLSPFCRAL	9	75	546.3072373721296	1090.5999218110592	2	546.805908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_KLSPFC(Carbamidomethyl (C))RAL_	REV__ENST00000333319.6_1_7:156432207-156432471:-|nuORF	37.81151784470057	0.4459294069877048	2				NaN	NaN	0	NaN	5431	3175	8603
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8609	25.262	NaN	10271	30	0	2323.2	0.033			+	41523	SVPTVPRN	8	69	435.2455822466669	868.4766115601338	2	435.24530029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVPTVPRN_	REV__ENSG00000155090|ENST00000285407|KLF10;REV__nc|ENSG00000155090|Q13118-2|KLF10;REV__nc|ENSG00000155090|Q13118-3|KLF10;REV__nc|ENSG00000155090|Q13118-4|KLF10	40.77816245573522	0.6514838689002179	2				NaN	NaN	0	NaN	5432	3175	8603
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8610	25.263	NaN	11636	30	0	2738.4	0.142				-1	TLVVAACGFVL	11	85	383.88259758055676	1148.6259633418704	3	383.882568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_TLVVAAC(Carbamidomethyl (C))GFVL_	ENSG00000168282|ENST00000305386|MGAT2;MGAT2|p.R116Gfs*48|1|0.14|ENSG00000168282|chr14:49621609-49621609|C/-|frameshift_variant	31.634271133179894	0.6579734920221648	2				NaN	NaN	0	NaN	5433	3175	8603
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8625	25.296	NaN	93755	30	0	28441	0.214	+			23242	KYIHSANVL	9	88	522.7957026402553	1043.5768523473105	2	522.7957153320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KYIHSANVL_	ENSG00000069956|ENST00000261845|MAPK6;ENSG00000100030|ENST00000215832|MAPK1;ENSG00000102882|ENST00000263025|MAPK3;ENSG00000141639|ENST00000400384|MAPK4;ENST00000478356.5_2_16:30128576-30134273:-|nuORF;ENST00000483869.1_1_16:30129346-30134419:-|nuORF;MAPK6|p.P206*|1|0.03|ENSG00000069956|chr15:52050053-52050054|CC/-|frameshift_variant;nc|ENSG00000100030|P28482-2|MAPK1;nc|ENSG00000102882|P27361-2|MAPK3;nc|ENSG00000102882|P27361-3|MAPK3	104.01359247289065	0.03510646158778409	2				NaN	NaN	0	NaN	5445	3178	8624
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8626	25.3	NaN	33564	30	0	5124.7	0.106	+			18317	IPTKQTQTF	9	90	532.292997045153	1062.571441157106	2	532.2930908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IPTKQTQTF_	ENSG00000109971|ENST00000534624|HSPA8;ENSG00000126803|ENST00000247207|HSPA2;ENSG00000173110|ENST00000309758|HSPA6;ENST00000397642.3_1_1:247394123-247394771:+|nuORF;ENST00000425843.1_1_X:120337248-120337797:-|nuORF;ENST00000445535.1_1_1:161576981-161578004:+|nuORF;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;ENST00000552265.2_1_12:111822376-111823062:+|nuORF;HSPA6|p.D632Gfs*9|1|0.12|ENSG00000173110|chr1:161526547-161526548|-/G|frameshift_variant;HSPA8|p.K569Dfs*6|1|0.3|ENSG00000109971|chr11:123058302-123058303|TC/-|frameshift_variant;nc|ENSG00000109971|P11142-2|HSPA8	88.17693792209575	0.07000514020414955	2				NaN	NaN	0	NaN	5446	3178	8624
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8627	25.302	NaN	29968	30	0	4322.4	0.106	+			43181	TETTKFEKL	9	81	548.7980881201571	1095.5816233071141	2	548.7982788085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TETTKFEKL_	CC2D1A|p.G898Vfs*45|1|0.32|ENSG00000132024|chr19:13929638-13929638|G/-|frameshift_variant;ENSG00000132024|ENST00000318003|CC2D1A;ENST00000589138.5_1_19:14029331-14037891:+|nuORF;ENST00000589224.1_1_19:14034393-14038165:+|nuORF;nc|ENSG00000132024|Q6P1N0-2|CC2D1A	123.20810148215591	0.019257656778428764	2				NaN	NaN	0	NaN	5447	3178	8624
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8628	25.304	NaN	14915	30	0	3293.8	0.106			+	26933	LYGDYHAN	8	75	476.71164490900696	951.408736884814	2	476.71142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LYGDYHAN_	REV__ENSG00000079150|ENST00000424785|FKBP7;REV__ENST00000464248.1_1_2:179330632-179343265:-|nuORF;REV__ENST00000470945.1_1_2:179330657-179343310:-|nuORF;REV__nc|ENSG00000079150|Q9Y680-1|FKBP7;REV__nc|ENSG00000079150|Q9Y680-3|FKBP7	47.91560031466742	0.6071945918984287	2				NaN	NaN	0	NaN	5448	3178	8624
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8629	25.306	NaN	8591.6	30	0	873.49	0.106			+	17769	IESKKELL	8	68	480.2920119533725	958.569470973545	2	480.2919616699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IESKKELL_	REV__ENST00000586103.5_1_17:40880894-40880930:-|nuORF	104.74654710444128	0.24806011021879068	2				NaN	NaN	0	NaN	5449	3178	8624
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8630	25.307	NaN	12686	30	0	1483.7	0.036	+			47378	VPHTNPPEY	9	64	527.2539188069402	1052.4932846806803	2	527.2540283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VPHTNPPEY_	ENSG00000177383|ENST00000317897|MAGEF1	67.49366992349736	0.1516260258713357	2				NaN	NaN	0	NaN	5450	3178	8624
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8631	25.308	NaN	7706.9	30	0	1066.4	0.139			+	31942	QQQLHIKA	8	74	483.2801008114686	964.5456486897373	2	483.2799072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QQQLHIKA_	REV__ENSG00000144791|ENST00000273317|LIMD1;REV__LIMD1|p.G320Vfs*6|1|0.25|ENSG00000144791|chr3:45595833-45595833|G/-|frameshift_variant;REV__LIMD1|p.Q334Pfs*65|1|0.29|ENSG00000144791|chr3:45595874-45595875|-/C|frameshift_variant	58.78195531508484	0.5138399468736706	2				NaN	NaN	0	NaN	5451	3178	8624
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8645	25.339	NaN	87363	30	0	12405	0.176	+			41128	SVITIVKSK	9	86	487.8157994140446	973.6170458948892	2	487.8157653808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVITIVKSK_	ENSG00000197063|ENST00000357736|MAFG	163.1509380574825	0.003936019289634439	2				NaN	NaN	0	NaN	5462	3181	8644
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8646	25.342	NaN	13941	30	0	6760.3	0.106	+			49411	VVTVSDVQELM	11	68	610.3151836753233	1218.6158144174465	2	610.3147583007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVTVSDVQELM_	ENSG00000110801|ENST00000541212|PSMD9;nc|ENSG00000256950|O00233-2|PSMD9;nc|ENSG00000256950|O00233-3|PSMD9	26.063383197487333	0.7164075632144343	2				NaN	NaN	0	NaN	5463	3181	8644
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8647	25.344	NaN	5830.1	30	0	991.28	0.106			+	18088	IKNGWAGAP	9	62	457.24835116960406	912.4821494060081	2	457.248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IKNGWAGAP_	REV__ENSG00000115677|ENST00000310931|HDLBP;REV__HDLBP|p.S551Kfs*2|1|0.11|ENSG00000115677|chr2:241248082-241248083|-/T|frameshift_variant;REV__HDLBP|p.T180Lfs*48|1|0.33|ENSG00000115677|chr2:241256719-241256719|T/-|frameshift_variant;REV__nc|ENSG00000115677|Q00341-2|HDLBP	35.200714571348534	0.47427825964483533	2				NaN	NaN	0	NaN	5464	3181	8644
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8648	25.346	NaN	10378	30	0	3035.4	0.106	+			12986	GETSTVEKL	9	78	482.2521530160966	962.4897530989932	2	482.2523498535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GETSTVEKL_	ENSG00000104825|ENST00000313582|NFKBIB;ENST00000509705.3_1_19:39390655-39398344:+|nuORF;nc|ENSG00000104825|Q15653-2|NFKBIB;NFKBIB|p.E300*|1|0.38|ENSG00000104825|chr19:38907586-38907587|-/A|frameshift_variant	136.26810882979174	0.012230845423532208	2				NaN	NaN	0	NaN	5465	3181	8644
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8649	25.348	NaN	12817	30	0	7294.6	0.106	+			47740	VSGKGAAWGVL	11	77	348.86580451067255	1043.5755841322177	3	348.8659973144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSGKGAAWGVL_	ANKRD50|p.G1144Wfs*12|1|0.39|ENSG00000151458|chr4:124669847-124669848|-/A|frameshift_variant;ANKRD50|p.N1088Mfs*6|1|0.42|ENSG00000151458|chr4:124670014-124670014|T/-|frameshift_variant;ANKRD50|p.P1235Hfs*8|2|0.36|ENSG00000151458|chr4:124669573-124669573|G/-|frameshift_variant;ENSG00000151458|ENST00000504087|ANKRD50	22.579656572578934	0.7529490144093228	2				NaN	NaN	0	NaN	5466	3181	8644
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8650	25.35	NaN	9624.9	30	0	969.14	0.106	+			30885	QEKIKSEEI	9	73	552.3003343524963	1102.5861157717925	2	552.3008422851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QEKIKSEEI_	ENSG00000071859|ENST00000393600|FAM50A;ENST00000478509.1_1_X:153674748-153677371:+|nuORF;ENST00000481619.5_1_X:153672624-153677371:+|nuORF	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	5467	3181	8644
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8651	25.352	NaN	7004.7	30	0	679.97	0.034			+	49445	VVVNKKKD	8	72	465.29260443953706	928.5706559458741	2	465.2923278808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VVVNKKKD_	REV__ENSG00000198788|ENST00000675028|MUC2;REV__nc|ENSG00000198788|Q02817|MUC2	50.0245360154114	0.5941082100236891	2				NaN	NaN	0	NaN	5468	3181	8644
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8665	25.381	NaN	79029	30	0	8850.4	0.215	+			15460	GTYVSSVPR	9	85	483.2561362733248	964.4977196134496	2	483.2560119628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTYVSSVPR_	ENSG00000204252|ENST00000229829|HLA-DOA;ENST00000485901.1_1_6:32974617-32975137:-|nuORF	120.8684288430529	0.02067403653475984	2				NaN	NaN	0	NaN	5479	3184	8664
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8666	25.384	NaN	13687	30	0	1477.4	0.106	+			41296	SVLNIAREK	9	83	515.3064560442009	1028.5983591552017	2	515.3064575195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVLNIAREK_	ANKRD36C|p.F1404Lfs*4|1|0.33|ENSG00000174501|chr2:95856049-95856049|A/-|frameshift_variant;ANKRD36C|p.F1404Lfs*4|1|0.33|ENSG00000174501|chr2:95856049-95856049|A/-|frameshift_variant;ANKRD36C|p.F1404Lfs*4|1|0.33|ENSG00000174501|chr2:95856049-95856049|A/-|frameshift_variant;ENSG00000174501|ENST00000295246|ANKRD36C;ENSG00000174501|ENST00000295246|ANKRD36C;ENSG00000174501|ENST00000295246|ANKRD36C;ENSG00000196912|ENST00000359901|ANKRD36B;ENST00000534304.5_1_2:96525807-96601268:-|nuORF;nc|ENSG00000174501|Q5JPF3-3|ANKRD36C;nc|ENSG00000174501|Q5JPF3|ANKRD36C;nc|ENSG00000196912|Q8N2N9-2|ANKRD36B;nc|ENSG00000196912|Q8N2N9-3|ANKRD36B	122.93914200107957	0.019420478173996256	2				NaN	NaN	0	NaN	5480	3184	8664
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8667	25.387	NaN	15430	30	0	5025.1	0.106				-1	AGPMVVPCVL	10	77	334.51008195144084	1000.5084164545226	3	334.51025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_AGPM(Oxidation (M))VVPCVL_	ENST00000394668.2_1_4:109543722-109546327:+|nuORF	39.252832667884924	0.5560298534376815	2				NaN	NaN	0	NaN	5481	3184	8664
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8668	25.388	NaN	12362	30	0	2296.1	0.106	+			10788	FAHGNAEL	8	72	429.70896387571537	857.4033748182308	2	429.7087097167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FAHGNAEL_	ENSG00000122299|ENST00000355758|ZC3H7A;nc|ENSG00000122299|Q8IWR0-2|ZC3H7A	111.64827973302667	0.24425243057279236	2				NaN	NaN	0	NaN	5482	3184	8664
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8669	25.39	NaN	8518.5	30	0	1716.5	0.106	+			637	ADWAAKKL	8	71	451.7583224534574	901.5020919737149	2	451.758056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ADWAAKKL_	ENSG00000100345|ENST00000216181|MYH9;MYH9|p.I784*|1|0.07|ENSG00000100345|chr22:36304036-36304036|G/-|frameshift_variant	96.19043198914106	0.25873003980794995	2				NaN	NaN	0	NaN	5483	3184	8664
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8670	25.392	NaN	9754.3	30	0	1151.3	0.034	+			17297	IADPSSKTL	9	66	466.2582482146905	930.5019434961811	2	466.2581481933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IADPSSKTL_	COL12A1|p.G2777Wfs*37|1|0.15|ENSG00000111799|chr6:75102684-75102685|-/G|frameshift_variant;COL12A1|p.G3027Wfs*19|1|0.1|ENSG00000111799|chr6:75087680-75087681|-/G|frameshift_variant;ENSG00000111799|ENST00000322507|COL12A1;nc|ENSG00000111799|Q99715-2|COL12A1;nc|ENSG00000111799|Q99715-4|COL12A1	136.26810882979174	0.012230845423532208	2				NaN	NaN	0	NaN	5484	3184	8664
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8671	25.393	NaN	4490.8	30	0	706.38	0.143			+	18218	INEIAFPHK	9	57	356.8658505059617	1067.5757221180852	3	356.8660888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_INEIAFPHK_	REV__ENSG00000171956|ENST00000396057|FOXB1;REV__ENSG00000204612|ENST00000376708|FOXB2	24.20275056022122	0.577060078256802	2				NaN	NaN	0	NaN	5485	3184	8664
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8683	25.42	NaN	145910	30	0	76270	0.158	+			18585	ISPSRTEAL	9	73	487.26908006908656	972.5236072049731	2	487.2689514160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ISPSRTEAL_	ENSG00000179344|ENST00000434651|HLA-DQB1;ENSG00000232629|ENST00000437316|HLA-DQB2;ENST00000487676.1_1_6:32629660-32630092:-|nuORF;nc|ENSG00000179344|P01920|HLA-DQB1;nc|ENSG00000232629|P05538-2|HLA-DQB2;nc|ENSG00000232629|P05538|HLA-DQB2	88.17693792209575	0.07000514020414955	2				NaN	NaN	0	NaN	5494	3187	8682
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8684	25.423	NaN	19656	30	0	9461.6	0.106	+			19805	KEDATKGKFAF	11	75	414.5559505017037	1240.6460221053112	3	414.5556335449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEDATKGKFAF_	ENSG00000170348|ENST00000303575|TMED10	35.17822180527639	0.6208003396870814	2				NaN	NaN	0	NaN	5495	3187	8682
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8685	25.425	NaN	12874	30	0	4314.4	0.106			+	35288	SALVVDPPIES	11	70	376.20496541853845	1125.5930668558153	3	376.2050476074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SALVVDPPIES_	REV__ENSG00000099219|ENST00000339450|ERMP1;REV__ERMP1|p.L627Wfs*6|1|0.25|ENSG00000099219|chr9:5805061-5805061|A/-|frameshift_variant;REV__ERMP1|p.T651Pfs*3|1|0.36|ENSG00000099219|chr9:5801292-5801292|T/-|frameshift_variant	24.519189625965996	0.7326048944360514	2				NaN	NaN	0	NaN	5496	3187	8682
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8686	25.427	NaN	8292.2	30	0	854.72	0.106	+			36097	SEKHIEVEV	9	77	535.2800920828026	1068.5456312324052	2	535.280029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SEKHIEVEV_	ENSG00000130935|ENST00000253247|NOL11;ENST00000583108.5_1_17:65733207-65733809:+|nuORF	67.49366992349736	0.1516260258713357	2				NaN	NaN	0	NaN	5497	3187	8682
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8687	25.428	NaN	4228	30	0	1395.3	0.106				-1	 	0	61	391.761873697282	781.509194461364	2	391.7616271972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5498	3187	8682
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8688	25.43	NaN	8546.2	30	0	3091.7	0.106			+	33662	RNETSQSAP	9	66	495.2353173824467	988.4560818316934	2	495.23504638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RNETSQSAP_	REV__ENSG00000065328|ENST00000378714|MCM10;REV__MCM10|p.E240Kfs*26|1|0.13|ENSG00000065328|chr10:13175629-13175629|G/-|frameshift_variant;REV__MCM10|p.N701Tfs*35|2|0.27|ENSG00000065328|chr10:13197741-13197741|A/-|frameshift_variant;REV__MCM10|p.R719Gfs*17|1|0.35|ENSG00000065328|chr10:13198715-13198715|A/-|frameshift_variant;REV__MCM10|p.S150Cfs*5|1|0.03|ENSG00000065328|chr10:13172474-13172475|-/GCGGG|frameshift_variant;REV__nc|ENSG00000065328|Q7L590|MCM10	32.81241826257853	0.4965981579233955	2				NaN	NaN	0	NaN	5499	3187	8682
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8689	25.432	NaN	6916	30	0	1079.8	0.035	+			31979	QRCHKPKK	8	71	512.7948535730901	1023.5751542129802	2	512.7947387695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QRCHKPKK_	ENSG00000145536|ENST00000274181|ADAMTS16;nc|ENSG00000145536|Q8TE57-2|ADAMTS16	42.47446043378293	0.6409579893742323	2				NaN	NaN	0	NaN	5500	3187	8682
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8702	25.459	NaN	23874	30	0	3603.8	0.214	+			39948	STMGYMMAK	9	87	518.2189345541569	1034.4233161751138	2	518.2193603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_STMGYM(Oxidation (M))MAK_	ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;ENST00000518337.1_1_8:74128289-74128592:-|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P	62.107414245175825	0.1960472003779324	2				NaN	NaN	0	NaN	5510	3190	8701
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8703	25.463	NaN	14408	30	0	2102.3	0.106	+			22766	KVFAGYYTK	9	89	538.7928337061534	1075.5711144791067	2	538.7928466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVFAGYYTK_	ENSG00000152952|ENST00000282903|PLOD2;nc|ENSG00000152952|O00469-3|PLOD2;nc|ENSG00000152952|O00469|PLOD2;PLOD2|p.N725Mfs*11|1|0.12|ENSG00000152952|chr3:146070757-146070757|T/-|frameshift_variant	123.20810148215591	0.019257656778428764	2				NaN	NaN	0	NaN	5511	3190	8701
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8704	25.465	NaN	9320.1	30	0	1377.3	0.106	+			38886	SSNVVHLIK	9	85	498.7950086285633	995.5754643239267	2	498.7953186035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSNVVHLIK_	ENSG00000160255|ENST00000652462|ITGB2	68.84614121027924	0.14577793175421136	2				NaN	NaN	0	NaN	5512	3190	8701
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8705	25.467	NaN	11314	30	0	1948.8	0.106	+			32998	REFGANDNM	9	71	527.2247882465726	1052.4350235599452	2	527.2247924804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_REFGANDNM_	ENSG00000162896|ENST00000356495|PIGR	76.16968421966216	0.11411088698345859	2				NaN	NaN	0	NaN	5513	3190	8701
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8706	25.469	NaN	8872.2	30	0	1042.6	0.106	+			50725	YEHPKDLKL	9	77	381.5449154893814	1141.6129170683444	3	381.5448913574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YEHPKDLKL_	ENSG00000147162|ENST00000373719|OGT;nc|ENSG00000147162|O15294-2|OGT;nc|ENSG00000147162|O15294-3|OGT;nc|ENSG00000147162|O15294-4|OGT	74.1650062923329	0.12277912660386392	2				NaN	NaN	0	NaN	5514	3190	8701
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8707	25.47	NaN	6068.3	30	0	969.39	0.106	+			50193	WLQLKDDEL	9	69	580.302800682917	1158.591048432634	2	580.301513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_WLQLKDDEL_	DMD|p.L3485*|2|0.35|ENSG00000198947|chrX:31169543-31169543|G/-|frameshift_variant;ENSG00000198947|ENST00000357033|DMD;nc|ENSG00000198947|P11532-11|DMD;nc|ENSG00000198947|P11532-12|DMD;nc|ENSG00000198947|P11532-13|DMD;nc|ENSG00000198947|P11532-14|DMD;nc|ENSG00000198947|P11532-15|DMD;nc|ENSG00000198947|P11532-16|DMD;nc|ENSG00000198947|P11532-17|DMD;nc|ENSG00000198947|P11532-2|DMD;nc|ENSG00000198947|P11532-3|DMD;nc|ENSG00000198947|P11532-4|DMD;nc|ENSG00000198947|P11532|DMD	37.15910966729921	0.4535818937225704	2				NaN	NaN	0	NaN	5515	3190	8701
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8708	25.472	NaN	12389	30	0	5585.4	0.037			+	43783	TLKLKGFSIE	10	68	379.2290290370429	1134.6652577113286	3	379.22906494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TLKLKGFSIE_	REV__ENSG00000136535|ENST00000389554|TBR1;REV__ENSG00000163508|ENST00000449599|EOMES;REV__EOMES|p.P623Lfs*6|2|0.28|ENSG00000163508|chr3:27717263-27717263|G/-|frameshift_variant;REV__nc|ENSG00000136535|Q16650-2|TBR1;REV__nc|ENSG00000163508|O95936-2|EOMES;REV__nc|ENSG00000163508|O95936-3|EOMES;REV__nc|ENSG00000163508|O95936|EOMES	31.634271133179894	0.6214930414500597	2				NaN	NaN	0	NaN	5516	3190	8701
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8722	25.502	NaN	16389	30	0	1004.9	0.211				-1	 	0	85	682.887082405643	1363.759611878086	2	682.8861694335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5527	3193	8721
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8723	25.506	NaN	13896	30	0	2653.8	0.106	+			43599	TILEKFKEK	9	79	568.3400050215749	1134.6654571099498	2	568.3399047851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TILEKFKEK_	CKAP5|p.K1126Rfs*25|1|0.46|ENSG00000175216|chr11:46767609-46767609|T/-|frameshift_variant;CKAP5|p.V1971Lfs*42|1|0.03|ENSG00000175216|chr11:46744211-46744212|-/TTGAAAAAAAG|frameshift_variant;ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5	187.50397467658743	0.0005427347354732084	2				NaN	NaN	0	NaN	5528	3193	8721
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8724	25.508	NaN	28494	30	0	2842.5	0.106	+			40010	STMSTNGIPR	10	83	532.2637784331678	1062.5130039331355	2	532.7654418945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STMSTNGIPR_	ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF	45.02220120713402	0.5028680121232791	2				NaN	NaN	0	NaN	5529	3193	8721
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8725	25.509	NaN	6357.9	30	0	706.01	0.106	+			24206	LERGGFSPQ	9	71	495.7542090718523	989.4938652105046	2	495.75830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LERGGFSPQ_	NLGN4X|p.T83Lfs*53|2|0.09|ENSG00000146938|chrX:6151221-6151221|G/-|frameshift_variant	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	5530	3193	8721
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8726	25.511	NaN	8644	30	0	1802	0.106	+			12914	GESGLGKSTL	10	70	474.75338099055415	947.4922090479083	2	474.75299072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GESGLGKSTL_	ENSG00000108387|ENST00000672673|SEPTIN4;ENSG00000122545|ENST00000350320|SEPTIN7;ENSG00000168385|ENST00000391971|SEPTIN2;ENSG00000180096|ENST00000321367|SEPTIN1;ENSG00000184702|ENST00000455784|SEPTIN5;ENST00000366210.2_1_2:242263647-242276275:+|nuORF;ENST00000425198.1_1_7:35872473-35938044:+|nuORF;ENST00000467971.5_1_2:242255375-242276932:+|nuORF;ENST00000477238.1_1_22:19707079-19707537:+|nuORF;ENST00000484740.1_1_2:242255375-242274650:+|nuORF;ENST00000494824.5_1_2:242255375-242275396:+|nuORF;ENST00000563743.1_1_16:30393079-30393866:-|nuORF;ENST00000563957.6_1_16:30392598-30394125:-|nuORF;ENST00000577440.5_1_17:56598198-56609324:-|nuORF;ENST00000584488.5_1_17:56598198-56606616:-|nuORF;ENST00000585170.1_1_17:56603011-56603617:-|nuORF;nc|ENSG00000108387|O43236-2|SEPTIN4;nc|ENSG00000108387|O43236-3|SEPTIN4;nc|ENSG00000108387|O43236-4|SEPTIN4;nc|ENSG00000108387|O43236-5|SEPTIN4;nc|ENSG00000108387|O43236-6|SEPTIN4;nc|ENSG00000108387|O43236|SEPTIN4;nc|ENSG00000122545|Q16181-2|SEPTIN7;nc|ENSG00000168385|Q15019-2|SEPTIN2;nc|ENSG00000168385|Q15019-3|SEPTIN2;nc|ENSG00000180096|Q8WYJ6-2|SEPTIN1;nc|ENSG00000284874|Q99719-2|SEPTIN5	120.30596017624542	0.026897611020491978	2				NaN	NaN	0	NaN	5531	3193	8721
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8727	25.513	NaN	6484.7	30	0	1662.8	0.031				-1	 	0	67	344.22486430760665	686.4351756820133	2	344.224853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5532	3193	8721
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8728	25.514	NaN	5176.4	30	0	488.95	0.141	+			36024	SEIKKTVVL	9	69	508.82121668471126	1015.6278804362225	2	508.821044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SEIKKTVVL_	ENSG00000058673|ENST00000367210|ZC3H11A;ENSG00000215817|ENST00000651890|ZC3H11B;nc|ENSG00000214558|P0DQW0|ZC3H11C;ZC3H11A|p.P447S|1|0.3|ENSG00000058673|chr1:203847480-203847480|C/T|missense_variant	71.87747018426188	0.13267044672804276	2				NaN	NaN	0	NaN	5533	3193	8721
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8745	25.55	NaN	28699	30	0	9601.4	0.214	+			46148	VDREVPVAA	9	72	478.2638554081381	NaN	0	478.2638854980469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VDREVPVAA_	ENSG00000122711|ENST00000379721|SPINK4	67.49366992349736	0.1173583512313808	2				NaN	NaN	0	NaN	5547	3196	8744
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8746	25.553	NaN	28157	30	0	8275.7	0.106	+			3328	ASMAVSDVLV	10	88	336.5085969429933	1006.5039614291799	3	336.5089416503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_ASM(Oxidation (M))AVSDVLV_	ENSG00000157219|ENST00000287907|HTR5A	42.86426827375447	0.522752283233888	2				NaN	NaN	0	NaN	5548	3196	8744
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8747	25.556	NaN	7771.6	30	0	1851.3	0.106			+	9217	EGSGYNTLA	9	65	456.2088877953137	910.4032226574274	2	456.208740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EGSGYNTLA_	REV__ENSG00000078674|ENST00000325083|PCM1;REV__nc|ENSG00000078674|Q15154-2|PCM1;REV__nc|ENSG00000078674|Q15154-4|PCM1;REV__nc|ENSG00000078674|Q15154-5|PCM1;REV__PCM1|p.N1992Tfs*15|1|0.25|ENSG00000078674|chr8:18025580-18025580|A/-|frameshift_variant	76.7741389293348	0.11149722112137898	2				NaN	NaN	0	NaN	5549	3196	8744
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8748	25.557	NaN	41384	30	0	2355.2	0.106			+	7722	DLSKERFLR	9	101	582.3303142900629	1162.6460756469257	2	582.3306274414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DLSKERFLR_	REV__ENSG00000116793|ENST00000369604|PHTF1;REV__nc|ENSG00000116793|Q9UMS5-2|PHTF1;REV__PHTF1|p.F546Sfs*2|1|0.17|ENSG00000116793|chr1:113705924-113705924|A/-|frameshift_variant;REV__PHTF1|p.M547Hfs*10|1|0.23|ENSG00000116793|chr1:113705923-113705924|-/A|frameshift_variant	60.97194046774394	0.20551255781574032	2				NaN	NaN	0	NaN	5550	3196	8744
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8749	25.559	NaN	14831	30	0	2537.9	0.106	+			20697	KGPQVSSAL	9	78	443.7531972922039	885.4918416512078	2	443.75311279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KGPQVSSAL_	AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK	67.49366992349736	0.1516260258713357	2				NaN	NaN	0	NaN	5551	3196	8744
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8750	25.561	NaN	16016	30	0	7294	0.033	+			314	AAPRAPSAL	9	63	427.2482519284003	852.4819509236006	2	427.2479248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AAPRAPSAL_	ENSG00000182158|ENST00000330387|CREB3L2;nc|ENSG00000182158|Q70SY1-2|CREB3L2	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	5552	3196	8744
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8751	25.561	NaN	10924	30	0	1552.2	0.141				-1	CFSEGCEEG	9	76	537.6801774869276	1073.3458020406551	2	537.6809692382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))FSEGC(Carbamidomethyl (C))EEG_	nc|ENSG00000197558|A2VEC9|SSPOP	23.04248740728303	0.5879033540491928	2				NaN	NaN	0	NaN	5553	3196	8744
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8763	25.589	NaN	42522	30	0	16715	0.214	+			3155	ASIFRTPLQL	10	83	382.56163463357353	1144.6630745009206	3	382.5618896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASIFRTPLQL_	ENSG00000185340|ENST00000616432|GAS2L1;GAS2L1|p.P614Hfs*2|3|0.2|ENSG00000185340|chr22:29312284-29312284|G/-|frameshift_variant;nc|ENSG00000185340|Q99501|GAS2L1	71.87747018426188	0.26198133118427214	2				NaN	NaN	0	NaN	5562	3199	8762
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8764	25.592	NaN	52638	30	0	12548	0.106	+			15210	GTSSMIVPK	9	81	460.2498960079669	918.4852390827339	2	460.2501220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTSSMIVPK_	ENSG00000166167|ENST00000370187|BTRC;nc|ENSG00000166167|Q9Y297-2|BTRC	98.62937762414208	0.04060045538121712	2				NaN	NaN	0	NaN	5563	3199	8762
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8765	25.594	NaN	19990	30	0	4302.3	0.106			+	39933	STMGHDAGLF	10	75	518.2316272774231	1034.448701621646	2	518.23193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STMGHDAGLF_	REV__ENST00000470506.1_1_2:58390551-58390605:-|nuORF	66.42927471994793	0.3073667423445326	2				NaN	NaN	0	NaN	5564	3199	8762
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8766	25.596	NaN	25238	30	0	4605	0.106			+	22252	KTAMENMPKVP	11	79	631.3170319929702	1260.6195110527403	2	631.31787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_KTAM(Oxidation (M))ENMPKVP_	REV__RAB11FIP1|p.A1184E|1|0.17|ENSG00000156675|chr8:37870502-37870502|G/T|missense_variant	53.08895987439943	0.38514566451266113	2				NaN	NaN	0	NaN	5565	3199	8762
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8767	25.598	NaN	17290	30	0	4861.8	0.106	+			14947	GTMKAQGVLLK	11	75	573.3393502932624	1144.6641476533248	2	573.3395385742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTMKAQGVLLK_	nc|ENSG00000166482|P55083-2|MFAP4	128.60217544463768	0.003645184319602832	2				NaN	NaN	0	NaN	5566	3199	8762
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8768	25.6	NaN	12591	30	0	6621.8	0.106	+			2168	ALLVDRYK	8	66	489.2925285224415	976.570504111683	2	489.29248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ALLVDRYK_	ENSG00000176102|ENST00000323959|CSTF3	37.15910966729921	0.6739408393984688	2				NaN	NaN	0	NaN	5567	3199	8762
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8769	25.602	NaN	10448	30	0	1118.8	0.037			+	-1	LVMLTLLIC	9	75	364.544695903812	1090.612258311636	3	364.5449523925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C),Oxidation (M)	_LVM(Oxidation (M))LTLLIC(Carbamidomethyl (C))_	REV__ENST00000557046.1_1_14:69908965-69921585:+|nuORF	26.69291269510374	0.5537881896960711	2				NaN	NaN	0	NaN	5568	3199	8762
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8782	25.629	NaN	11358	30	0	1379.8	0.214				-1	 	0	85	336.5340769935905	1006.5804015809715	3	336.5341491699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5578	3202	8781
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8783	25.633	NaN	14540	30	0	1958.6	0.106			+	-1	MTRLPGKIQG	10	81	372.87684008889005	1115.6086908668701	3	372.8779602050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_M(Oxidation (M))TRLPGKIQG_	REV__ENST00000306562.7_1_1:249143474-249143687:+|nuORF	53.08895987439943	0.42869529153390606	2				NaN	NaN	0	NaN	5579	3202	8781
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8784	25.635	NaN	10374	30	0	1561.2	0.106	+			6960	CPNGGSLTHTY	11	75	603.7642598444994	1205.5139667557987	2	603.7639770507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_C(Carbamidomethyl (C))PNGGSLTHTY_	nc|ENSG00000198788|Q02817|MUC2	85.86182877749512	0.11571513784830015	2				NaN	NaN	0	NaN	5580	3202	8781
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8785	25.637	NaN	5292.2	30	0	1637	0.106	+			26132	LSPRALAILWA	11	60	404.2485295970703	1209.7237593914108	3	404.2481384277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSPRALAILWA_	ENST00000495794.5_1_5:881851-881974:-|nuORF	30.568863376406313	0.6691487505135859	2				NaN	NaN	0	NaN	5581	3202	8781
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8786	25.639	NaN	2948.1	30	0	356.62	0.106	+			25365	LPGHAVVV	8	54	396.2423762514172	790.4701995696345	2	396.2420654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LPGHAVVV_	ENST00000606788.5_1_20:44518901-44519711:+|nuORF	24.504012794735996	0.7701314986472447	2				NaN	NaN	0	NaN	5582	3202	8781
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8787	25.641	NaN	6175.5	30	0	732.51	0.106	+			49739	VYNQPGHQF	9	73	545.259573247445	NaN	0	545.2595825195312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VYNQPGHQF_	ENSG00000214814|ENST00000522917|FER1L6;FER1L6|p.D1516Gfs*3|1|0.06|ENSG00000214814|chr8:124091575-124091576|-/G|frameshift_variant;FER1L6|p.E470Gfs*8|2|0.42|ENSG00000214814|chr8:123980801-123980802|-/C|frameshift_variant;FER1L6|p.F1321Lfs*26|1|0.16|ENSG00000214814|chr8:124070594-124070595|-/GTTGAATTCAC|frameshift_variant;FER1L6|p.G1237Afs*10|1|0.35|ENSG00000214814|chr8:124067790-124067790|A/-|frameshift_variant;FER1L6|p.N1273Tfs*23|1|0.44|ENSG00000214814|chr8:124069454-124069454|C/-|frameshift_variant	96.19043198914106	0.029117245125711146	2				NaN	NaN	0	NaN	5583	3202	8781
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8788	25.642	NaN	2822.1	30	0	599.3	0.036	+			20990	KKGAGHGG	8	60	356.2000532646391	710.3855535960782	2	356.200927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KKGAGHGG_	ENST00000517637.2_1_11:67010562-67011027:+|nuORF	1.46482723592726	0.7814164654673592	2				NaN	NaN	0	NaN	5584	3202	8781
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8800	25.669	NaN	9772.4	30	0	3715.7	0.214			+	26664	LVFDGVDVNR	10	78	378.5364171878264	1132.587422163679	3	378.53643798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LVFDGVDVNR_	REV__ENSG00000133056|ENST00000684373|PIK3C2B;REV__PIK3C2B|p.C561Afs*18|1|0.5|ENSG00000133056|chr1:204457761-204457761|G/-|frameshift_variant	21.9598887501803	0.7004979571547932	2				NaN	NaN	0	NaN	5593	3205	8799
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8801	25.672	NaN	8729.9	30	0	541.79	0.106	+			45000	TVEDVIVRK	9	82	529.8140745297524	1057.6135961263046	2	529.814208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVEDVIVRK_	BRD8|p.G620Wfs*10|1|0.17|ENSG00000112983|chr5:138164101-138164102|-/A|frameshift_variant;BRD8|p.P1065Lfs*29|1|0.14|ENSG00000112983|chr5:138149724-138149724|G/-|frameshift_variant;ENSG00000112983|ENST00000254900|BRD8;ENST00000515254.1_1_5:137506426-137514303:-|nuORF;nc|ENSG00000112983|Q9H0E9-2|BRD8;nc|ENSG00000112983|Q9H0E9-4|BRD8	122.1759843771914	0.019882474861609503	2				NaN	NaN	0	NaN	5594	3205	8799
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8802	25.674	NaN	11317	30	0	2996.1	0.106			+	43703	TKLLSISVK	9	90	330.2181090858475	987.6324978577426	3	330.2181701660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TKLLSISVK_	REV__ENSG00000185010|ENST00000360256|F8;REV__F8|p.E1101Rfs*17|1|0.25|ENSG00000185010|chrX:154930489-154930490|-/T|frameshift_variant;REV__F8|p.E1292Rfs*16|2|0.53|ENSG00000185010|chrX:154929920-154929920|T/-|frameshift_variant;REV__F8|p.E1988Rfs*4|1|0.36|ENSG00000185010|chrX:154903942-154903943|-/T|frameshift_variant;REV__F8|p.G1291Rfs*29|1|0.48|ENSG00000185010|chrX:154929919-154929920|-/T|frameshift_variant	40.05817265558897	0.419577045485086	2				NaN	NaN	0	NaN	5595	3205	8799
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8803	25.676	NaN	7843.5	30	0	718.32	0.106			+	45560	TYLLTNAQNY	10	83	600.7986896093203	1199.5828262854404	2	600.79833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TYLLTNAQNY_	REV__ENSG00000132952|ENST00000255304|USPL1	58.2462437865262	0.38179041844353556	2				NaN	NaN	0	NaN	5596	3205	8799
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8804	25.678	NaN	5150.8	30	0	634.36	0.106			+	16728	HLHAMMAQL	9	66	534.259720497379	1066.504888061558	2	534.2598266601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_HLHAM(Oxidation (M))MAQL_	REV__ENSG00000137166|ENST00000307972|FOXP4;REV__FOXP4|p.T413Dfs*32|1|0.23|ENSG00000137166|chr6:41590042-41590043|-/C|frameshift_variant;REV__nc|ENSG00000137166|Q8IVH2-2|FOXP4;REV__nc|ENSG00000137166|Q8IVH2-3|FOXP4	47.91560031466742	0.327412564698279	2				NaN	NaN	0	NaN	5597	3205	8799
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8805	25.68	NaN	13133	30	0	1160.5	0.106			+	9445	EKLIKEKN	8	88	501.3037594041244	1000.5929658750488	2	500.80548095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EKLIKEKN_	REV__ENSG00000100296|ENST00000490103|THOC5;REV__ENST00000358079.8_1_22:29924947-29938918:-|nuORF;REV__ENST00000475187.5_1_22:29932576-29945100:-|nuORF;REV__ENST00000488052.1_1_22:29927628-29932726:-|nuORF	148.98678547993487	0.23009633913008076	2				NaN	NaN	0	NaN	5598	3205	8799
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8806	25.682	NaN	5723.7	30	0	921.24	0.035	+			22704	KVAMLRQI	8	59	325.5308821024368	NaN	0	325.53094482421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_KVAM(Oxidation (M))LRQI_	NSMAF|p.T555R|1|0.31|ENSG00000035681|chr8:58597515-58597515|G/C|missense_variant	55.50420428727701	1.7418937515398478	2				NaN	NaN	0	NaN	5599	3205	8799
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8819	25.71	NaN	9682.9	30	0	4908	0.214	+			3550	ASTGLSLTK	9	56	439.2530468565446	876.4915407798892	2	439.2526550292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASTGLSLTK_	ENSG00000073921|ENST00000393346|PICALM;nc|ENSG00000073921|Q13492-2|PICALM;nc|ENSG00000073921|Q13492-3|PICALM;nc|ENSG00000073921|Q13492-4|PICALM;nc|ENSG00000073921|Q13492-5|PICALM	98.58198989935565	0.04066992115528678	2				NaN	NaN	0	NaN	5609	3208	8818
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8820	25.713	NaN	6654.5	30	0	863.36	0.106	+			2071	ALASVVIHK	9	72	469.2951587905592	936.5757646479184	2	469.2947082519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ALASVVIHK_	ENSG00000132436|ENST00000433017|FIGNL1;FIGNL1|p.K309Sfs*16|2|0.21|ENSG00000132436|chr7:50446362-50446362|T/-|frameshift_variant;nc|ENSG00000132436|Q6PIW4-2|FIGNL1	110.11987700582712	0.028875675806141952	2				NaN	NaN	0	NaN	5610	3208	8818
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8821	25.715	NaN	4936	30	0	569.99	0.106	+			28730	NNRSLDLD	8	65	473.7330165871349	945.4514802410698	2	473.732666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NNRSLDLD_	CON__P04264;CON__P12035;CON__P50446;CON__Q5XQN5;CON__Q6IFZ6;CON__Q7Z794;CON__Q8BGZ7;CON__Q922U2;ENSG00000167768|ENST00000252244|KRT1;ENSG00000186442|ENST00000417996|KRT3;ENSG00000189182|ENST00000341809|KRT77	90.36981228632155	0.27635063874291205	2				NaN	NaN	0	NaN	5611	3208	8818
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8822	25.717	NaN	8583.1	30	0	2430.2	0.106			+	-1	STALVILVDM	10	95	359.86840723373825	NaN	0	359.8691711425781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_STALVILVDM(Oxidation (M))_	REV__ENSG00000123191|ENST00000242839|ATP7B;REV__nc|ENSG00000123191|P35670-3|ATP7B;REV__nc|ENSG00000123191|P35670-4|ATP7B	32.75053402867276	0.3926392905881664	2				NaN	NaN	0	NaN	5612	3208	8818
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8823	25.719	NaN	4847.8	30	0	647.26	0.106	+			35641	SCIKFKTFK	9	72	367.8757220273093	NaN	0	367.8755187988281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SCIKFKTFK_	ENST00000560392.5_1_15:80390802-80390838:+|nuORF	36.446750945000026	0.29355505452396785	2				NaN	NaN	0	NaN	5613	3208	8818
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8824	25.721	NaN	6550.8	30	0	720.78	0.106	+			7726	DLSQIPYINLV	11	86	637.8506800313991	1273.686807129598	2	637.8510131835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DLSQIPYINLV_	ENSG00000148459|ENST00000376215|PDSS1;nc|ENSG00000148459|Q5T2R2-2|PDSS1;nc|ENSG00000148459|Q5T2R2-3|PDSS1;PDSS1|p.T333Lfs*14|1|0.41|ENSG00000148459|chr10:26735548-26735548|C/-|frameshift_variant	48.601550744091256	0.44024757269956427	2				NaN	NaN	0	NaN	5614	3208	8818
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8825	25.722	NaN	3427.1	30	0	373.72	0.034			+	48700	VTTKIFDK	8	71	476.2789327985546	950.5433126639092	2	476.2784423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VTTKIFDK_	REV__DEK|p.E372Sfs*2|1|0.2|ENSG00000124795|chr6:18226177-18226177|T/-|frameshift_variant;REV__ENSG00000124795|ENST00000652689|DEK;REV__nc|ENSG00000124795|P35659-2|DEK	36.446750945000026	0.6783611724927969	2				NaN	NaN	0	NaN	5615	3208	8818
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8838	25.75	NaN	17576	30	0	2420	0.214	+			27722	MQLGVHYSK	9	76	531.7738795418038	1061.5332061504075	2	531.7742919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MQLGVHYSK_	ENST00000430246.6_1_14:21731784-21731862:-|nuORF;ENST00000554969.5_1_14:21731484-21731862:-|nuORF	132.757866228626	0.013877640931359021	2				NaN	NaN	0	NaN	5625	3211	8837
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8839	25.753	NaN	14709	30	0	6919	0.106			+	12299	GCWSFIPHINS	11	82	659.3063874962595	1316.598222059319	2	659.307373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GC(Carbamidomethyl (C))WSFIPHINS_	REV__ENSG00000134901|ENST00000376004|POGLUT2;REV__ENST00000460338.5_1_13:103443606-103451020:-|nuORF	79.71258880314673	0.15476893924564336	2				NaN	NaN	0	NaN	5626	3211	8837
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8840	25.755	NaN	27442	30	0	4181.6	0.106			+	19886	KEESSNKLQ	9	87	354.8513089320184	1061.5320973962553	3	354.8514709472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEESSNKLQ_	REV__ENSG00000152193|ENST00000282003|OBI1	36.446750945000026	0.4619375763483977	2				NaN	NaN	0	NaN	5627	3211	8837
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8841	25.757	NaN	5668.4	30	0	992.17	0.106			+	40701	SVAWIRTLNST	11	73	624.3408203125	NaN	0	624.3408203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVAWIRTLNST_	REV__ENST00000460853.1_1_22:51015219-51015891:-|nuORF;REV__ENST00000461117.1_1_22:51015219-51015874:-|nuORF	47.95952297671804	0.32997419910078585	2				NaN	NaN	0	NaN	5628	3211	8837
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8842	25.759	NaN	5607.5	30	0	563.03	0.106	+			1837	AIITPPPAK	9	64	454.2843348847257	906.5541168362514	2	454.2838134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AIITPPPAK_	ENSG00000113648|ENST00000511689|MACROH2A1;ENST00000360597.8_1_5:134681666-134724783:-|nuORF;ENST00000506532.5_1_5:134705062-134724783:-|nuORF;ENST00000513210.5_1_5:134695623-134724711:-|nuORF;nc|ENSG00000113648|O75367-3|MACROH2A1;nc|ENSG00000113648|O75367|MACROH2A1	54.776311868738084	0.25715957988447635	2				NaN	NaN	0	NaN	5629	3211	8837
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8843	25.761	NaN	6466.6	30	0	606.49	0.106			+	33173	RETVNYSI	8	75	491.2537593778849	980.4929658225698	2	491.2956848144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RETVNYSI_	REV__ENSG00000184307|ENST00000638807|ZDHHC23;REV__ENST00000488129.1_1_3:113676552-113677474:+|nuORF;REV__nc|ENSG00000184307|Q8IYP9|ZDHHC23	54.776311868738084	0.5534952410049249	2				NaN	NaN	0	NaN	5630	3211	8837
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8844	25.763	NaN	5707	30	0	627.01	0.032				-1	 	0	74	384.7720451196625	767.529537306125	2	384.7723693847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5631	3211	8837
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8856	25.879	NaN	253030	30	0	25488	0.144	+			11455	FNDPNAKEM	9	92	533.2370437294823	1064.4595345257644	2	533.237060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FNDPNAKEM_	ENSG00000056097|ENST00000265069|ZFR	173.39201167336012	0.002187917786942103	2				NaN	NaN	0	NaN	5640	3214	8855
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8857	25.881	NaN	58951	30	0	7857.3	0.106	+			14053	GSIEINIKK	9	98	501.3037594041244	1000.5929658750488	2	501.3030700683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSIEINIKK_	ENSG00000064042|ENST00000503057|LIMCH1;LIMCH1|p.K805Rfs*20|1|0.37|ENSG00000064042|chr4:41680049-41680049|A/-|frameshift_variant;LIMCH1|p.T960Pfs*48|1|0.18|ENSG00000064042|chr4:41685768-41685768|A/-|frameshift_variant;nc|ENSG00000064042|Q9UPQ0-10|LIMCH1;nc|ENSG00000064042|Q9UPQ0-2|LIMCH1;nc|ENSG00000064042|Q9UPQ0-3|LIMCH1;nc|ENSG00000064042|Q9UPQ0-4|LIMCH1;nc|ENSG00000064042|Q9UPQ0-5|LIMCH1;nc|ENSG00000064042|Q9UPQ0-6|LIMCH1;nc|ENSG00000064042|Q9UPQ0-8|LIMCH1;nc|ENSG00000064042|Q9UPQ0-9|LIMCH1;nc|ENSG00000064042|Q9UPQ0|LIMCH1	148.98678547993487	0.0071052929883181565	2				NaN	NaN	0	NaN	5641	3214	8855
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8858	25.884	NaN	40666	30	0	11419	0.106	+			40081	STNSFALNK	9	90	491.2537593778849	980.4929658225698	2	491.2535705566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STNSFALNK_	BPTF|p.D2844Afs*20|1|0.08|ENSG00000171634|chr17:67959766-67959767|-/C|frameshift_variant;BPTF|p.K2718Nfs*36|3|0.12|ENSG00000171634|chr17:67948150-67948150|A/-|frameshift_variant;ENSG00000171634|ENST00000306378|BPTF;ENST00000579209.1_1_17:62758032-62758825:-|nuORF;nc|ENSG00000171634|Q12830-4|BPTF;nc|ENSG00000171634|Q12830|BPTF	213.8501245462261	3.7359575671390645E-08	2				NaN	NaN	0	NaN	5642	3214	8855
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8859	25.885	NaN	41115	30	0	6711	0.106	+			35853	SEDKKNIIL	9	89	530.3061630120652	1058.5977730909303	2	530.3062133789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SEDKKNIIL_	ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65623404-65625570:-|nuORF	110.11987700582712	0.028875675806141952	2				NaN	NaN	0	NaN	5643	3214	8855
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8860	25.887	NaN	16431	30	0	1766.2	0.106	+			23051	KVTEGSFVYK	10	90	579.3140076609344	1156.6134623886687	2	579.3141479492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KVTEGSFVYK_	ENSG00000057608|ENST00000380191|GDI2;GDI2|p.S222Afs*20|1|0.1|ENSG00000057608|chr10:5785197-5785197|T/-|frameshift_variant	128.60217544463768	0.01518043149187549	2				NaN	NaN	0	NaN	5644	3214	8855
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8861	25.889	NaN	12007	30	0	2535.5	0.106	+			43032	TEKVSKISL	9	91	335.5378291370936	NaN	0	335.5377502441406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TEKVSKISL_	ENSG00000054523|ENST00000676179|KIF1B;ENSG00000130294|ENST00000498729|KIF1A;KIF1A|p.N1306Kfs*14|1|0.46|ENSG00000130294|chr2:240725306-240725307|-/T|frameshift_variant;KIF1A|p.R782Afs*30|1|0.33|ENSG00000130294|chr2:240760738-240760738|G/-|frameshift_variant;KIF1B|p.N365Mfs*8|1|0.32|ENSG00000054523|chr1:10278037-10278037|C/-|frameshift_variant;nc|ENSG00000054523|O60333-2|KIF1B;nc|ENSG00000054523|O60333-3|KIF1B;nc|ENSG00000054523|O60333-4|KIF1B;nc|ENSG00000130294|Q12756-2|KIF1A;nc|ENSG00000130294|Q12756|KIF1A	63.53385203322761	0.134247007536971	2				NaN	NaN	0	NaN	5645	3214	8855
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8862	25.891	NaN	7645.2	30	0	653.52	0.034	+			1207	AEQIKHIL	8	80	476.28481716342117	950.5550813936424	2	476.2846374511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AEQIKHIL_	ENSG00000133112|ENST00000530705|TPT1;ENST00000458298.1_1_6:86137181-86137394:-|nuORF;ENST00000490277.1_1_13:45913571-45913754:-|nuORF;nc|ENSG00000133112|P13693-2|TPT1	87.75429964447693	0.2842685068779738	2				NaN	NaN	0	NaN	5646	3214	8855
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8863	25.891	NaN	14151	30	0	3830.5	0.142	+			51547	YYDTHTNTY	9	82	589.243601077161	1176.4726492211219	2	589.2437744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_YYDTHTNTY_	ENSG00000064651|ENST00000262461|SLC12A2;nc|ENSG00000064651|P55011-3|SLC12A2;SLC12A2|p.E1119Rfs*7|1|0.47|ENSG00000064651|chr5:128184417-128184418|-/A|frameshift_variant;SLC12A2|p.F466Lfs*59|1|0.11|ENSG00000064651|chr5:128135793-128135793|T/-|frameshift_variant;SLC12A2|p.P1171Sfs*18|1|0.38|ENSG00000064651|chr5:128186498-128186499|-/TC|frameshift_variant	163.1509380574825	0.003936019289634439	2				NaN	NaN	0	NaN	5647	3214	8855
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8877	25.922	NaN	199880	30	0	49177	0.102	+			1804	AIFQGKLEK	9	93	517.3057439549257	1032.5969349766513	2	517.3056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AIFQGKLEK_	ENSG00000118322|ENST00000327245|ATP10B	173.39201167336012	0.002187917786942103	2				NaN	NaN	0	NaN	5658	3217	8876
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8878	25.924	NaN	293830	30	0	218820	0.106	+			1805	AIFQGKLEK	9	84	345.20597360370977	1032.5960914113293	3	345.2062072753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AIFQGKLEK_	ENSG00000118322|ENST00000327245|ATP10B	76.16968421966216	0.11411088698345859	2				NaN	NaN	0	NaN	5659	3217	8876
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8879	25.926	NaN	27851	30	0	5435.7	0.106			+	31079	QFGASVLK	8	73	425.2452344326392	848.4759159320785	2	425.2449035644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QFGASVLK_	REV__ENSG00000108384|ENST00000337432|RAD51C;REV__nc|ENSG00000108384|O43502-2|RAD51C;REV__RAD51C|p.S105*|1|0.55|ENSG00000108384|chr17:58695099-58695099|C/-|frameshift_variant	99.37495909608758	0.2510236104623939	2				NaN	NaN	0	NaN	5660	3217	8876
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8880	25.928	NaN	16046	30	0	2045	0.106			+	26361	LTCDSNCCTD	10	81	537.6801774869276	1073.3458020406551	2	537.6810913085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LTCDSNCCTD_	REV__ADAM17|p.V566Afs*58|1|0.4|ENSG00000151694|chr2:9497197-9497200|CAAA/-|frameshift_variant;REV__ENSG00000151694|ENST00000310823|ADAM17;REV__nc|ENSG00000151694|P78536-2|ADAM17	26.69291269510374	0.6618461711292317	2				NaN	NaN	0	NaN	5661	3217	8876
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8881	25.929	NaN	14232	30	0	3599.6	0.106			+	10110	ESLRVETLI	9	86	353.8728217608042	1058.5966358826126	3	353.8729553222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ESLRVETLI_	REV__ENSG00000198198|ENST00000634258|SZT2;REV__nc|ENSG00000198198|Q5T011-4|SZT2;REV__nc|ENSG00000198198|Q5T011-5|SZT2;REV__SZT2|p.A1115Lfs*4|1|0.26|ENSG00000198198|chr1:43427358-43427358|G/-|frameshift_variant;REV__SZT2|p.H875Tfs*13|1|0.16|ENSG00000198198|chr1:43425177-43425178|-/C|frameshift_variant;REV__SZT2|p.L1644Ffs*4|1|0.36|ENSG00000198198|chr1:43431727-43431728|-/T|frameshift_variant;REV__SZT2|p.P2844Rfs*9|1|0.34|ENSG00000198198|chr1:43443669-43443669|C/-|frameshift_variant;REV__SZT2|p.R3241Afs*11|1|0.33|ENSG00000198198|chr1:43448401-43448401|G/-|frameshift_variant	30.503639358989545	0.5181749237905803	2				NaN	NaN	0	NaN	5662	3217	8876
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8882	25.931	NaN	9236.4	30	0	1040.8	0.106	+			33709	RPFEENGACKY	11	82	657.300482875706	1312.586412818212	2	657.3004760742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RPFEENGACKY_	ENSG00000185650|ENST00000439696|ZFP36L1;ENST00000555997.1_1_14:69256252-69257717:-|nuORF;ZFP36L1|p.G271Vfs*36|1|0.32|ENSG00000185650|chr14:68789738-68789738|C/-|frameshift_variant;ZFP36L1|p.H177Tfs*56|1|0.79|ENSG00000185650|chr14:68790021-68790021|G/-|frameshift_variant;ZFP36L1|p.P274Rfs*33|1|0.26|ENSG00000185650|chr14:68789729-68789729|G/-|frameshift_variant;ZFP36L1|p.S294Afs*13|1|0.33|ENSG00000185650|chr14:68789671-68789671|G/-|frameshift_variant	115.23196543181992	0.02934640941715571	2				NaN	NaN	0	NaN	5663	3217	8876
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8883	25.933	NaN	12496	30	0	1921.5	0.034	+			17777	IESSVGKSL	9	74	460.2583057109065	918.502058488613	2	460.258056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IESSVGKSL_	ENSG00000151151|ENST00000373935|IPMK	98.58198989935565	0.04066992115528678	2				NaN	NaN	0	NaN	5664	3217	8876
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8884	25.934	NaN	7678.9	30	0	933.38	0.142	+			18690	ITCTPHYAKK	10	81	581.3090578312037	NaN	0	581.3093872070312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_ITCTPHYAKK_	ENSG00000184719|ENST00000331772|RNLS;nc|ENSG00000184719|Q5VYX0-2|RNLS	52.936696900407355	0.28703625529470256	2				NaN	NaN	0	NaN	5665	3217	8876
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8897	25.963	NaN	24634	30	0	3516.7	0.214	+			41887	SVTQASKEL	9	76	481.7611983053588	961.5078436775176	2	481.7609558105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVTQASKEL_	ENST00000415992.5_1_9:139704261-139704318:+|nuORF	101.25262130126117	0.03792372629710479	2				NaN	NaN	0	NaN	5675	3220	8896
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8898	25.966	NaN	7947	30	0	847.92	0.106	+			3239	ASLDGETNLK	10	73	524.2694240542145	1046.5242951752289	2	524.2693481445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASLDGETNLK_	ATP11B|p.H616Cfs*3|1|0.09|ENSG00000058063|chr3:182869310-182869311|TC/-|frameshift_variant;ATP11B|p.Y884Ifs*30|1|0.41|ENSG00000058063|chr3:182884886-182884886|T/-|frameshift_variant;ENSG00000058063|ENST00000323116|ATP11B;ENSG00000118322|ENST00000327245|ATP10B;ENST00000521033.5_1_5:160061154-160212677:-|nuORF;nc|ENSG00000118322|O94823-2|ATP10B;nc|ENSG00000118322|O94823-3|ATP10B	74.1650062923329	0.2432923583094885	2				NaN	NaN	0	NaN	5676	3220	8896
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8899	25.968	NaN	11269	30	0	1096.5	0.106	+			9473	EKQVLLQADW	10	87	615.3303229850026	1228.646093036805	2	615.3297729492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EKQVLLQADW_	ENSG00000218891|ENST00000325421|ZNF579;ZNF579|p.P264Rfs*141|1|0.3|ENSG00000218891|chr19:55578854-55578854|C/-|frameshift_variant	59.93077597824379	0.36646980200755325	2				NaN	NaN	0	NaN	5677	3220	8896
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8900	25.97	NaN	17668	30	0	6598.8	0.106	+			21201	KLEDGPKFLK	10	77	392.2325987857655	1173.6759669574965	3	392.2324523925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KLEDGPKFLK_	ENSG00000156508|ENST00000309268|EEF1A1;ENST00000417549.1_1_13:28789725-28790031:+|nuORF;ENST00000436459.2_1_9:135895553-135896258:+|nuORF;ENST00000513637.1_1_5:43495177-43495438:-|nuORF;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	72.09557110113691	0.26019946548822415	2				NaN	NaN	0	NaN	5678	3220	8896
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8901	25.972	NaN	9036	30	0	914.89	0.106	+			20144	KEKPPITVV	9	80	505.81587230594283	1009.6171916786857	2	505.8157653808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEKPPITVV_	ENSG00000141127|ENST00000268835|PRPSAP2;ENSG00000161542|ENST00000446526|PRPSAP1;ENST00000472686.1_1_17:74309820-74324990:-|nuORF;ENST00000592474.1_1_17:74309820-74309979:-|nuORF;nc|ENSG00000141127|O60256-2|PRPSAP2;nc|ENSG00000141127|O60256-3|PRPSAP2;nc|ENSG00000141127|O60256-4|PRPSAP2;nc|ENSG00000161542|Q14558|PRPSAP1	59.93077597824379	0.21419174904018318	2				NaN	NaN	0	NaN	5679	3220	8896
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8902	25.974	NaN	9705.1	30	0	1454.2	0.106	+			1095	AELESKTNTL	10	74	553.2905826314038	1104.5666123296076	2	553.2903442382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AELESKTNTL_	CEP55|p.D247Ifs*9|1|0.25|ENSG00000138180|chr10:93516987-93516987|A/-|frameshift_variant;ENSG00000138180|ENST00000371485|CEP55;nc|ENSG00000138180|Q53EZ4-2|CEP55	91.26522074875469	0.12383023862516404	2				NaN	NaN	0	NaN	5680	3220	8896
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8903	25.976	NaN	5866.7	30	0	653.65	0.037	+			8616	ECRKAFSQY	9	72	566.2659852322552	1130.5174175313102	2	566.2658081054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ECRKAFSQY_	ENSG00000198440|ENST00000333201|ZNF583	41.42661286455405	0.403525789677298	2				NaN	NaN	0	NaN	5681	3220	8896
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8918	26.007	NaN	24569	30	0	2007.6	0.214	+			4661	ATLQNVLRK	9	89	521.8216939074779	1041.6288348817557	2	521.822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATLQNVLRK_	ENSG00000108424|ENST00000290158|KPNB1;nc|ENSG00000108424|Q14974-2|KPNB1	145.46060221211434	0.007927189773590037	2				NaN	NaN	0	NaN	5693	3223	8917
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8919	26.011	NaN	21989	30	0	3175	0.106	+			24204	LERDDNPSL	9	75	529.7595319946869	1057.5045110561737	2	529.7596435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LERDDNPSL_	ENSG00000102753|ENST00000261667|KPNA3;ENSG00000186432|ENST00000334256|KPNA4;KPNA3|p.N437Tfs*3|2|0.41|ENSG00000102753|chr13:49705683-49705683|T/-|frameshift_variant;KPNA4|p.M441Wfs*9|1|0.12|ENSG00000186432|chr3:160508158-160508158|T/-|frameshift_variant	85.16082228582465	0.07850854922700509	2				NaN	NaN	0	NaN	5694	3223	8917
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8920	26.013	NaN	25856	30	0	5591.7	0.106	+			28341	NEIKDSVVA	9	81	487.7613429258464	973.5081329184928	2	487.76123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NEIKDSVVA_	ENSG00000167658|ENST00000309311|EEF2	87.69643885390035	0.07135982304947239	2				NaN	NaN	0	NaN	5695	3223	8917
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8921	26.015	NaN	20675	30	0	12228	0.106	+			12150	GAIKVFVNK	9	86	325.87083114860536	974.5906640460162	3	325.8710632324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GAIKVFVNK_	ENSG00000131725|ENST00000254029|WDR44;nc|ENSG00000131725|Q5JSH3-2|WDR44;nc|ENSG00000131725|Q5JSH3-4|WDR44;WDR44|p.F898L|1|0.26|ENSG00000131725|chrX:118448939-118448939|C/A|missense_variant	58.78195531508484	0.22376836668196862	2				NaN	NaN	0	NaN	5696	3223	8917
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8922	26.016	NaN	30766	30	0	8001.6	0.106	+			5789	AVGVPIKVK	9	76	455.80790830578735	909.6012636783747	2	455.8077087402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVGVPIKVK_	ENSG00000129003|ENST00000644861|VPS13C;nc|ENSG00000129003|Q709C8-2|VPS13C;nc|ENSG00000129003|Q709C8-3|VPS13C;nc|ENSG00000129003|Q709C8-4|VPS13C;VPS13C|p.E2463Nfs*18|1|0.25|ENSG00000129003|chr15:61920157-61920157|C/-|frameshift_variant;VPS13C|p.N3163Sfs*6|1|0.05|ENSG00000129003|chr15:61882732-61882733|-/TTATCATCAC|frameshift_variant;VPS13C|p.P3597Lfs*3|1|0.26|ENSG00000129003|chr15:61868732-61868732|G/-|frameshift_variant	82.30502934623384	0.08758161712619916	2				NaN	NaN	0	NaN	5697	3223	8917
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8923	26.018	NaN	15403	30	0	2738.7	0.035			+	30800	QEALKCMLA	9	80	503.7560913874636	1005.4976298417272	2	503.7566833496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QEALKCMLA_	REV__ENSG00000188039|ENST00000524140|NWD1;REV__ENST00000438489.6_1_19:16849058-16926137:+|nuORF;REV__nc|ENSG00000188039|Q149M9|NWD1;REV__NWD1|p.N1368Kfs*41|1|0.32|ENSG00000188039|chr19:16807950-16807951|-/A|frameshift_variant	74.25504064058377	0.12238981753128622	2				NaN	NaN	0	NaN	5698	3223	8917
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8924	26.019	NaN	9184.2	30	0	959.7	0.143	+			5897	AVLDEAKNINK	11	82	607.8406440111652	NaN	0	607.8408203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AVLDEAKNINK_	ENSG00000155980|ENST00000455537|KIF5A;ENSG00000168280|ENST00000435030|KIF5C;ENSG00000170759|ENST00000302418|KIF5B;KIF5B|p.M622Wfs*8|1|0.15|ENSG00000170759|chr10:32022898-32022898|T/-|frameshift_variant;KIF5C|p.S816Vfs*68|1|0.35|ENSG00000168280|chr2:149005459-149005459|A/-|frameshift_variant;nc|ENSG00000168280|O60282-2|KIF5C	157.3448221729694	1.901481617234733E-07	2				NaN	NaN	0	NaN	5699	3223	8917
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8936	26.047	NaN	41535	30	0	6083.2	0.214	+			7335	DAVRTKMVY	9	114	361.52661065895296	1081.558002577059	3	361.5268859863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DAVRTKMVY_	ENSG00000149100|ENST00000531120|EIF3M;nc|ENSG00000149100|Q7L2H7-2|EIF3M	47.657333605630114	0.33044192980041115	2				NaN	NaN	0	NaN	5708	3226	8935
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8937	26.05	NaN	30667	30	0	4909.2	0.106	+			43075	TELTTKSSL	9	88	490.2689343979776	978.5233158627552	2	490.2685852050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TELTTKSSL_	ENSG00000133606|ENST00000255977|MKRN1;ENST00000475010.5_1_7:140155450-140179030:-|nuORF;nc|ENSG00000133606|Q9UHC7-2|MKRN1;nc|ENSG00000133606|Q9UHC7-3|MKRN1;nc|ENSG00000133606|Q9UHC7-4|MKRN1;nc|ENSG00000238222|Q13434|MKRN4P	131.61620852596164	0.014413238321579053	2				NaN	NaN	0	NaN	5709	3226	8935
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8938	26.052	NaN	16529	30	0	4766.3	0.106				-1	ITRTRSCTP	9	75	364.52575139720534	1090.555424791816	3	364.52587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_ITRTRSC(Carbamidomethyl (C))TP_	ADGRB3|p.R366I|1|0.3|ENSG00000135298|chr6:68943896-68943896|G/T|missense_variant	31.529811441608018	0.5085848003137583	2				NaN	NaN	0	NaN	5710	3226	8935
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8939	26.054	NaN	9526.8	30	0	1572.5	0.106			+	7327	DATQLGAKN	9	78	459.2380063796202	916.4614598260404	2	459.2376403808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DATQLGAKN_	REV__ENSG00000173744|ENST00000310078|AGFG1;REV__nc|ENSG00000173744|P52594-2|AGFG1;REV__nc|ENSG00000173744|P52594-3|AGFG1;REV__nc|ENSG00000173744|P52594-4|AGFG1	67.49366992349736	0.1516260258713357	2				NaN	NaN	0	NaN	5711	3226	8935
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8940	26.056	NaN	15564	30	0	1812.3	0.106				-1	 	0	80	336.5340769935905	1006.5804015809715	3	336.5341491699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5712	3226	8935
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8941	26.058	NaN	7294.3	30	0	1408.1	0.106				-1	 	0	72	322.1934665270198	642.3723801208396	2	322.1935119628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5713	3226	8935
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8942	26.059	NaN	7017.2	30	0	1015.5	0.039				-1	 	0	79	630.8320970461855	1259.6496411591709	2	630.8326416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5714	3226	8935
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8956	26.089	NaN	35480	30	0	3244	0.214	+			40402	STVGAGAYAYK	11	93	544.2748651605676	1086.5351773879352	2	544.27490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STVGAGAYAYK_	ENSG00000156709|ENST00000287295|AIFM1;nc|ENSG00000156709|O95831-4|AIFM1	163.1509380574825	4.647741878928617E-05	2				NaN	NaN	0	NaN	5725	3229	8955
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8957	26.093	NaN	19147	30	0	1656.7	0.106	+			49918	VYVDKVEKM	9	78	555.7968686819668	1109.5791844307334	2	555.797119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYVDKVEKM_	AMOT|p.L850Cfs*59|1|0.13|ENSG00000126016|chrX:112779606-112779606|G/-|frameshift_variant;ENSG00000126016|ENST00000371959|AMOT;nc|ENSG00000126016|Q4VCS5-2|AMOT	99.01295224348159	0.040209060045561164	2				NaN	NaN	0	NaN	5726	3229	8955
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8958	26.095	NaN	27208	30	0	4103.8	0.106	+			16882	HPHGLQVTY	9	91	526.2690531008393	1050.5235532684785	2	526.26904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HPHGLQVTY_	chr7:900613-904126|469|13.6|0.0|20.38|-|ENST00000649206|ADAP1,COX19;ENSG00000105963|ENST00000265846|ADAP1;ENST00000478000.5_1_7:938560-944975:-|nuORF;ENST00000481406.1_1_7:943651-944759:-|nuORF;nc|ENSG00000105963|O75689-2|ADAP1;nc|ENSG00000105963|O75689-3|ADAP1	67.49366992349736	0.1516260258713357	2				NaN	NaN	0	NaN	5727	3229	8955
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8959	26.097	NaN	18136	30	0	6186.6	0.106	+			3965	ATATLIIEHK	10	81	366.2166799939917	1095.6282105821751	3	366.2168273925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATATLIIEHK_	ENSG00000100522|ENST00000216410|GNPNAT1;ENST00000553987.1_1_14:53248483-53250189:-|nuORF	35.17822180527639	0.5925517082438457	2				NaN	NaN	0	NaN	5728	3229	8955
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8960	26.099	NaN	27961	30	0	5397.2	0.106	+			1211	AEQKLQQTL	9	92	529.7957852350564	1057.5770175369128	2	529.7957763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEQKLQQTL_	ENSG00000131626|ENST00000253925|PPFIA1;nc|ENSG00000131626|Q13136-2|PPFIA1	125.71293069911285	0.017741295328254008	2				NaN	NaN	0	NaN	5729	3229	8955
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8961	26.1	NaN	11042	30	0	1352.3	0.034	+			41999	SVYITLKK	8	80	476.2972591863326	950.5799654394652	2	476.2970275878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVYITLKK_	ENSG00000140319|ENST00000267884|SRP14;ENST00000558243.1_1_15:40330963-40331317:-|nuORF;ENST00000558527.5_1_15:40329525-40331317:-|nuORF;ENST00000559475.5_1_15:40329218-40331146:-|nuORF	84.9155231211612	0.2928622555056503	2				NaN	NaN	0	NaN	5730	3229	8955
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8962	26.101	NaN	13822	30	0	3158.7	0.139	+			12896	GESDPMKGV	9	75	460.21309127222105	918.4116296112421	2	460.2129211425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GESDPMKGV_	ENSG00000181222|ENST00000674977|POLR2A;nc|ENSG00000181222|P24928|POLR2A	87.69643885390035	0.07135982304947239	2				NaN	NaN	0	NaN	5731	3229	8955
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8976	26.131	NaN	30924	30	0	6910.9	0.215	+			34762	RYGDGGSTF	9	74	480.2143304257274	958.4141079182548	2	480.2142333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RYGDGGSTF_	ENSG00000169045|ENST00000393432|HNRNPH1;ENST00000502904.5_1_5:179043989-179045371:-|nuORF;ENST00000515481.5_1_5:179044503-179045371:-|nuORF	98.62937762414208	0.04060045538121712	2				NaN	NaN	0	NaN	5742	3232	8975
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8977	26.135	NaN	16142	30	0	2192.5	0.106	+			23584	LALVLHEL	8	60	454.2843348847257	906.5541168362514	2	454.2840270996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LALVLHEL_	ENSG00000025708|ENST00000252029|TYMP;nc|ENSG00000025708|P19971-2|TYMP	54.76467175910256	0.5536104764165384	2				NaN	NaN	0	NaN	5743	3232	8975
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8978	26.137	NaN	21416	30	0	6987.1	0.106	+			39703	STIPPELVKQK	11	74	620.3690134815031	1238.723474029806	2	620.3690185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STIPPELVKQK_	ENSG00000058729|ENST00000283109|RIOK2	108.31271852315183	0.04350174712075085	2				NaN	NaN	0	NaN	5744	3232	8975
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8979	26.139	NaN	10904	30	0	1485	0.106	+			47155	VLSDINLKK	9	72	515.3186585853181	1028.622764237436	2	515.3187255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VLSDINLKK_	ENSG00000173848|ENST00000355029|NET1;ENST00000484741.1_1_10:5496419-5498268:+|nuORF;nc|ENSG00000173848|Q7Z628-2|NET1	49.536043120802724	0.308405419312776	2				NaN	NaN	0	NaN	5745	3232	8975
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8980	26.14	NaN	14207	30	0	1347.4	0.106	+			15694	GVMVYGIKK	9	80	497.7910740179109	NaN	0	497.7914733886719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GVMVYGIKK_	ENSG00000116459|ENST00000369722|ATP5PB	63.30626980617807	0.13521764763214936	2				NaN	NaN	0	NaN	5746	3232	8975
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8981	26.142	NaN	17109	30	0	1636.8	0.035	+			42867	TEGQVVNKL	9	86	494.2771074805958	986.5396620279917	2	494.2769775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TEGQVVNKL_	ENSG00000183963|ENST00000333137|SMTN;ENST00000460658.5_1_22:31484094-31491444:+|nuORF;ENST00000489337.5_1_22:31484532-31494796:+|nuORF;nc|ENSG00000183963|P53814-6|SMTN;nc|ENSG00000183963|P53814|SMTN;SMTN|p.A318Pfs*39|1|0.29|ENSG00000183963|chr22:31090967-31090967|C/-|frameshift_variant;SMTN|p.G455Afs*3|1|0.38|ENSG00000183963|chr22:31091383-31091383|G/-|frameshift_variant;SMTN|p.L317Pfs*24|1|0.4|ENSG00000183963|chr22:31090966-31090967|-/C|frameshift_variant;SMTN|p.S536Vfs*33|1|0.33|ENSG00000183963|chr22:31091813-31091813|C/-|frameshift_variant	150.36159442982594	0.006784847064083231	2				NaN	NaN	0	NaN	5747	3232	8975
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8982	26.143	NaN	7767.5	30	0	1092.7	0.141	+			42149	SYQPNENKF	9	77	563.7621274179841	1125.509701902768	2	563.7623901367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SYQPNENKF_	ENSG00000168143|ENST00000306858|FAM83B;FAM83B|p.R987H|1|0.23|ENSG00000168143|chr6:54941931-54941931|G/A|missense_variant	58.22992032128504	0.22837015374068087	2				NaN	NaN	0	NaN	5748	3232	8975
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8994	26.169	NaN	23943	30	0	6492.6	0.214	+			24011	LEDKRFGII	9	82	364.2130693239779	1089.6173785721337	3	364.2132568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LEDKRFGII_	ENSG00000057468|ENST00000263187|MSH4	37.81151784470057	0.4459294069877048	2				NaN	NaN	0	NaN	5757	3235	8993
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8995	26.172	NaN	11938	30	0	1860.6	0.106	+			10493	EVSKGSENAP	10	73	509.2460120761034	1016.4774712190068	2	509.2458190917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EVSKGSENAP_	ENST00000316660.6_1_18:57570844-57570931:+|nuORF	52.936696900407355	0.4300801048568001	2				NaN	NaN	0	NaN	5758	3235	8993
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8996	26.174	NaN	17288	30	0	11012	0.106	+			26227	LSSLLQVVIK	10	75	367.24088454969643	1098.7008242492893	3	367.2408447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSSLLQVVIK_	ENST00000565135.1_1_14:52755809-52755905:+|nuORF	14.864876125193954	0.7409144161711139	2				NaN	NaN	0	NaN	5759	3235	8993
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8997	26.176	NaN	10208	30	0	959.41	0.106	+			25926	LSGVFSEGR	9	69	476.2472061290282	950.4798593248564	2	476.242919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSGVFSEGR_	ENST00000586544.1_1_19:10798526-10798769:+|nuORF	82.24051045832904	0.08786059719216216	2				NaN	NaN	0	NaN	5760	3235	8993
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8998	26.178	NaN	12784	30	0	1844.1	0.106	+			35328	SANSHNIAL	9	65	463.7383201148047	925.4620872964094	2	463.7378234863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SANSHNIAL_	ENSG00000030066|ENST00000378460|NUP160;nc|ENSG00000030066|Q12769|NUP160	82.24051045832904	0.08786059719216216	2				NaN	NaN	0	NaN	5761	3235	8993
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	8999	26.18	NaN	9703.6	30	0	1057.1	0.106	+			21324	KLTNTASNHS	10	77	536.7737123536765	1071.532871774153	2	536.7732543945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KLTNTASNHS_	ENSG00000180530|ENST00000318948|NRIP1;NRIP1|p.E729Rfs*5|1|0.34|ENSG00000180530|chr21:14966009-14966009|T/-|frameshift_variant;NRIP1|p.E729Rfs*8|1|0.33|ENSG00000180530|chr21:14966008-14966009|-/T|frameshift_variant	74.1650062923329	0.2432923583094885	2				NaN	NaN	0	NaN	5762	3235	8993
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9000	26.182	NaN	5567.7	30	0	709.52	0.034			+	46964	VKHLEEAL	8	70	469.7692778364113	937.5240027396226	2	469.76861572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VKHLEEAL_	REV__ENSG00000126777|ENST00000395314|KTN1;REV__KTN1|p.A1102Gfs*15|2|0.3|ENSG00000126777|chr14:55670756-55670757|-/A|frameshift_variant;REV__KTN1|p.H994Sfs*2|1|0.35|ENSG00000126777|chr14:55659677-55659678|-/C|frameshift_variant;REV__KTN1|p.K1078Nfs*12|1|0.3|ENSG00000126777|chr14:55667292-55667292|A/-|frameshift_variant;REV__KTN1|p.K1101Rfs*18|1|0.4|ENSG00000126777|chr14:55670757-55670757|A/-|frameshift_variant;REV__KTN1|p.P993Lfs*6|1|0.36|ENSG00000126777|chr14:55659678-55659678|C/-|frameshift_variant;REV__nc|ENSG00000126777|Q86UP2-2|KTN1;REV__nc|ENSG00000126777|Q86UP2-3|KTN1;REV__nc|ENSG00000126777|Q86UP2-4|KTN1	71.29570347882199	0.39610197767395533	2				NaN	NaN	0	NaN	5763	3235	8993
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9014	26.211	NaN	12746	30	0	1108.6	0.214	+			28209	NAVAGAVKY	9	81	446.74773965391296	891.4809263746259	2	446.7477722167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAVAGAVKY_	ENSG00000030066|ENST00000378460|NUP160;ENST00000529863.1_1_11:47861610-47869870:-|nuORF;nc|ENSG00000030066|Q12769-2|NUP160;nc|ENSG00000030066|Q12769|NUP160	90.36981228632155	0.0638227155548745	2				NaN	NaN	0	NaN	5774	3238	9013
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9015	26.214	NaN	9572.1	30	0	745.15	0.106			+	7167	DAGGIQFIRI	10	81	545.3066105288453	1088.5986681244906	2	545.306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DAGGIQFIRI_	REV__ENST00000554171.1_3_14:42170598-42236083:+|nuORF	54.776311868738084	0.41334902933431344	2				NaN	NaN	0	NaN	5775	3238	9013
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9016	26.217	NaN	10743	30	0	1831	0.106	+			51114	YMFLGEVAL	9	74	521.7661375415247	1041.5177221498493	2	521.7621459960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YMFLGEVAL_	ENSG00000041880|ENST00000398755|PARP3;ENST00000486510.1_1_3:51981724-51982493:+|nuORF;nc|ENSG00000041880|Q9Y6F1-2|PARP3	40.5726180659479	0.4135428067754104	2				NaN	NaN	0	NaN	5776	3238	9013
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9017	26.218	NaN	8090.2	30	0	792.07	0.106	+			21863	KRLIKDLQQ	9	77	571.3566940131975	1140.698835093195	2	571.3562622070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KRLIKDLQQ_	ENSG00000067798|ENST00000397909|NAV3;NAV3|p.K1098Nfs*81|1|0.22|ENSG00000067798|chr12:78119487-78119487|A/-|frameshift_variant;NAV3|p.K1745Sfs*14|1|0.13|ENSG00000067798|chr12:78177244-78177244|C/-|frameshift_variant;NAV3|p.K498Rfs*8|1|0.38|ENSG00000067798|chr12:78007026-78007026|A/-|frameshift_variant;NAV3|p.L1995Sfs*5|1|0.05|ENSG00000067798|chr12:78188704-78188705|-/T|frameshift_variant;NAV3|p.T2082Qfs*22|1|0.13|ENSG00000067798|chr12:78190166-78190166|A/-|frameshift_variant;nc|ENSG00000067798|Q8IVL0-2|NAV3;nc|ENSG00000067798|Q8IVL0-3|NAV3	74.25504064058377	0.12238981753128622	2				NaN	NaN	0	NaN	5777	3238	9013
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9018	26.22	NaN	7282.2	30	0	1931.8	0.106	+			45705	VAAKRKIELN	10	67	381.2398238471027	1140.6976421415081	3	381.2398376464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VAAKRKIELN_	ENSG00000011405|ENST00000691414|PIK3C2A;ENST00000531428.1_1_11:17099415-17121458:-|nuORF	23.04248740728303	0.69165701907106	2				NaN	NaN	0	NaN	5778	3238	9013
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9019	26.222	NaN	5756.9	30	0	834.28	0.04	+			11417	FLRHNKDLVAQ	11	76	670.8752350657293	1339.7359171982584	2	670.874755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FLRHNKDLVAQ_	ENSG00000176853|ENST00000334705|FAM91A1	49.46582953369473	0.42842160004107194	2				NaN	NaN	0	NaN	5779	3238	9013
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9020	26.223	NaN	5240.8	30	0	728.38	0.146			+	-1	EMPLPREMAP	10	78	401.5229913293358	1201.5471445882074	3	401.5228576660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Oxidation (M)	_EM(Oxidation (M))PLPREM(Oxidation (M))AP_	REV__ENSG00000198758|ENST00000361965|EPS8L3;REV__EPS8L3|p.N273Tfs*33|1|0.43|ENSG00000198758|chr1:109757958-109757958|T/-|frameshift_variant;REV__EPS8L3|p.S264Qfs*23|1|0.39|ENSG00000198758|chr1:109757987-109757988|-/T|frameshift_variant;REV__nc|ENSG00000198758|Q8TE67-2|EPS8L3;REV__nc|ENSG00000198758|Q8TE67-3|EPS8L3	30.568863376406313	0.6301935916953115	2				NaN	NaN	0	NaN	5780	3238	9013
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9033	26.252	NaN	31073	30	0	6207.5	0.214	+			44880	TTVPHVFSK	9	86	339.1904424478985	1014.5494979438954	3	339.19073486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTVPHVFSK_	ENSG00000095015|ENST00000399503|MAP3K1	56.72105179125745	0.24094814563026265	2				NaN	NaN	0	NaN	5790	3241	9032
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9034	26.256	NaN	18861	30	0	7735.6	0.106	+			31593	QLTAAELKQI	10	77	372.22027965263146	1113.6390095580944	3	372.2204284667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QLTAAELKQI_	BEND3|p.D265Tfs*54|3|0.29|ENSG00000178409|chr6:107070398-107070398|C/-|frameshift_variant;BEND3|p.E692Rfs*21|1|0.28|ENSG00000178409|chr6:107069117-107069118|-/G|frameshift_variant;ENSG00000178409|ENST00000369042|BEND3	83.6470233535746	0.16744595502813267	2				NaN	NaN	0	NaN	5791	3241	9032
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9035	26.258	NaN	15171	30	0	2009	0.106	+			50508	YANNAIKTY	9	88	529.2701087585083	NaN	0	529.2701416015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YANNAIKTY_	ATP8B1|p.I809Nfs*11|1|0.61|ENSG00000081923|chr18:57661455-57661456|-/T|frameshift_variant;ATP8B1|p.N205Kfs*2|1|0.26|ENSG00000081923|chr18:57697807-57697808|-/T|frameshift_variant;ATP8B1|p.P792Hfs*8|1|0.34|ENSG00000081923|chr18:57662528-57662528|A/-|frameshift_variant;ENSG00000081923|ENST00000648908|ATP8B1	77.31757898189308	0.08057531075035683	2				NaN	NaN	0	NaN	5792	3241	9032
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9036	26.26	NaN	11548	30	0	1981.2	0.106	+			26568	LTTAVITNK	9	71	480.7893737100921	959.5641944869842	2	480.78912353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LTTAVITNK_	ENSG00000104408|ENST00000220849|EIF3E	59.93077597824379	0.21419174904018318	2				NaN	NaN	0	NaN	5793	3241	9032
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9037	26.262	NaN	12734	30	0	1547.7	0.106	+			32825	RCAREFGL	8	72	476.2472061290282	950.4798593248564	2	476.2477722167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RCAREFGL_	ENSG00000178342|ENST00000316249|KCNG2;ENST00000590307.1_1_18:77636237-77659813:+|nuORF	76.84663266511073	0.3498490246073164	2				NaN	NaN	0	NaN	5794	3241	9032
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9038	26.264	NaN	10111	30	0	691.31	0.106	+			45760	VAEESRQVL	9	70	515.7805747730526	1029.5465966129052	2	515.7804565429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VAEESRQVL_	ENSG00000101353|ENST00000343811|MROH8;nc|ENSG00000101353|Q9H579-2|MROH8	56.43379154798735	0.2433427591689151	2				NaN	NaN	0	NaN	5795	3241	9032
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9039	26.265	NaN	8084.5	30	0	1337.8	0.038	+			14235	GSSSDTYLFKK	11	82	616.8121910385704	1231.6098291439407	2	616.8118896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GSSSDTYLFKK_	ENSG00000184898|ENST00000331426|RBM43	85.92353377893507	0.11546253517298165	2				NaN	NaN	0	NaN	5796	3241	9032
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9050	26.291	NaN	42459	30	0	6032.2	0.214	+			42023	SVYVLVRQK	9	90	546.3327788596755	NaN	0	546.3329467773438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVYVLVRQK_	ENSG00000197601|ENST00000354817|FAR1	159.27591364854348	0.00998596805711162	2				NaN	NaN	0	NaN	5804	3244	9049
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9051	26.295	NaN	17424	30	0	3149.9	0.106	+			18362	IQNPTMINK	9	85	529.7863303663529	1057.5581077995057	2	529.7875366210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IQNPTMINK_	ENSG00000167182|ENST00000376741|SP2;nc|ENSG00000167182|Q02086-2|SP2	114.8945686534367	0.024290463251177924	2				NaN	NaN	0	NaN	5805	3244	9049
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9052	26.297	NaN	14962	30	0	1402.7	0.106	+			19179	IYTKLNQKI	9	80	560.840179481609	1119.6658060300178	2	560.840576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IYTKLNQKI_	ENSG00000138190|ENST00000260762|EXOC6;EXOC6|p.L640Ffs*39|1|0.37|ENSG00000138190|chr10:92974192-92974193|-/T|frameshift_variant;nc|ENSG00000138190|Q8TAG9-2|EXOC6	140.11223852658463	0.010427410095706195	2				NaN	NaN	0	NaN	5806	3244	9049
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9053	26.299	NaN	20880	30	0	6511.1	0.106	+			19180	IYTKLNQKI	9	70	374.22892259868104	1119.664938396243	3	374.22906494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IYTKLNQKI_	ENSG00000138190|ENST00000260762|EXOC6;EXOC6|p.L640Ffs*39|1|0.37|ENSG00000138190|chr10:92974192-92974193|-/T|frameshift_variant;nc|ENSG00000138190|Q8TAG9-2|EXOC6	37.81151784470057	0.4459294069877048	2				NaN	NaN	0	NaN	5807	3244	9049
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9054	26.301	NaN	9954.7	30	0	3063.1	0.106			+	-1	MLMVVVEVL	9	77	524.7932915506858	1047.5720301681715	2	524.7939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_M(Oxidation (M))LMVVVEVL_	REV__RTTN|p.F276Sfs*69|2|0.11|ENSG00000176225|chr18:70196515-70196515|A/-|frameshift_variant	38.80614096846853	0.43426287593479557	2				NaN	NaN	0	NaN	5808	3244	9049
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9055	26.302	NaN	4547.6	30	0	637.25	0.106	+			45472	TYDGNHDTF	9	70	535.2154121909854	1068.4162714487707	2	535.2156372070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TYDGNHDTF_	ENSG00000105438|ENST00000330720|KDELR1;ENSG00000136240|ENST00000258739|KDELR2;ENST00000599084.1_1_19:48892794-48894615:-|nuORF;nc|ENSG00000105438|P24390-2|KDELR1;nc|ENSG00000136240|P33947-2|KDELR2	82.7504851949679	0.08565546331141553	2				NaN	NaN	0	NaN	5809	3244	9049
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9056	26.304	NaN	11652	30	0	4265.1	0.037			+	819	AEGADPSHRQS	11	80	577.7627540037066	1153.5109550742131	2	577.7633056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AEGADPSHRQS_	REV__ENSG00000262179|ENST00000573382|MYMX	44.377184641726394	0.49804979881800077	2				NaN	NaN	0	NaN	5810	3244	9049
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9070	26.333	NaN	33999	30	0	10682	0.214	+			15484	GVAGGSILK	9	86	401.24519006101843	800.4758271888369	2	401.2450866699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVAGGSILK_	EIF2S3|p.I441Nfs*4|1|0.29|ENSG00000130741|chrX:24073223-24073224|-/A|frameshift_variant;ENSG00000130741|ENST00000253039|EIF2S3;ENSG00000180574|ENST00000538173|EIF2S3B;nc|ENSG00000180574|Q2VIR3-2|EIF2S3B	113.41158876095287	0.025516849225023126	2				NaN	NaN	0	NaN	5821	3247	9069
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9071	26.336	NaN	16231	30	0	2488	0.106	+			1038	AEKLQRITV	9	79	353.2167955121445	1056.6285571366334	3	353.2169494628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEKLQRITV_	ENSG00000179041|ENST00000320270|RRS1;RRS1|p.P47Rfs*42|3|0.42|ENSG00000179041|chr8:66429266-66429266|C/-|frameshift_variant	37.15910966729921	0.4535818937225704	2				NaN	NaN	0	NaN	5822	3247	9069
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9072	26.339	NaN	29812	30	0	4902.1	0.106			+	9914	EQREQHEDNF	10	92	666.2841265782065	1330.553700223213	2	666.2841186523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EQREQHEDNF_	REV__ENSG00000157741|ENST00000473989|UBN2;REV__nc|ENSG00000157741|Q6ZU65-2|UBN2;REV__UBN2|p.G1191Efs*28|1|0.17|ENSG00000157741|chr7:139284473-139284473|G/-|frameshift_variant;REV__UBN2|p.K314Rfs*11|1|0.15|ENSG00000157741|chr7:139261281-139261281|A/-|frameshift_variant;REV__UBN2|p.K315Efs*5|1|0.25|ENSG00000157741|chr7:139261280-139261281|-/A|frameshift_variant;REV__UBN2|p.K542Nfs*2|1|0.14|ENSG00000157741|chr7:139272347-139272347|A/-|frameshift_variant;REV__UBN2|p.L543Tfs*6|1|0.38|ENSG00000157741|chr7:139272346-139272347|-/A|frameshift_variant;REV__UBN2|p.S988Hfs*27|1|0.18|ENSG00000157741|chr7:139283862-139283862|C/-|frameshift_variant	63.53385203322761	0.33370026130094593	2				NaN	NaN	0	NaN	5823	3247	9069
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9073	26.34	NaN	12739	30	0	5169.7	0.106				-1	 	0	63	327.73789876609186	653.4612445989837	2	327.738037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5824	3247	9069
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9074	26.342	NaN	12991	30	0	2719.2	0.106	+			12626	GEIGTKTTL	9	72	460.2585100113307	918.5024670894614	2	460.2581481933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GEIGTKTTL_	ENSG00000175792|ENST00000322623|RUVBL1	101.25262130126117	0.03792372629710479	2				NaN	NaN	0	NaN	5825	3247	9069
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9075	26.344	NaN	4569.8	30	0	493.13	0.033			+	533	ADALSLNAL	9	68	444.2454378957849	886.4763228583698	2	444.2451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ADALSLNAL_	REV__ENSG00000183024|ENST00000328890|OR1G1	62.107414245175825	0.1960472003779324	2				NaN	NaN	0	NaN	5826	3247	9069
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9076	26.345	NaN	4387.9	30	0	1864	0.142			+	-1	ARVACRKH	8	68	333.18690892747395	996.5388973826218	3	333.1870422363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_ARVAC(Carbamidomethyl (C))RKH_	REV__DGKD|p.G855Vfs*48|1|0.29|ENSG00000077044|chr2:233457306-233457306|G/-|frameshift_variant;REV__ENSG00000077044|ENST00000264057|DGKD;REV__ENSG00000102780|ENST00000337343|DGKH;REV__ENST00000474488.1_1_2:234343429-234350860:+|nuORF;REV__ENST00000490764.5_1_2:234327938-234366271:+|nuORF;REV__ENST00000498255.6_1_13:42728006-42769963:+|nuORF;REV__nc|ENSG00000077044|Q16760-2|DGKD;REV__nc|ENSG00000102780|Q86XP1-2|DGKH;REV__nc|ENSG00000102780|Q86XP1-3|DGKH;REV__nc|ENSG00000102780|Q86XP1-5|DGKH	24.20275056022122	0.7724576178584145	2				NaN	NaN	0	NaN	5827	3247	9069
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9088	26.372	NaN	26092	30	0	3595.4	0.214	+			7710	DLQTDQPVL	9	85	514.7670306256563	1027.5195083181125	2	514.7666625976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DLQTDQPVL_	ENSG00000168411|ENST00000361070|RFWD3	87.69643885390035	0.07135982304947239	2				NaN	NaN	0	NaN	5836	3250	9087
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9089	26.376	NaN	14038	30	0	1383.5	0.106	+			28352	NEKETMQSL	9	76	540.2562546672032	1078.4979564012062	2	540.2562255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NEKETMQSL_	CON__Q497I4;CON__Q92764;ENSG00000111057|ENST00000388835|KRT18;ENSG00000197079|ENST00000246639|KRT35;ENST00000402024.2_1_6:116779363-116779789:-|nuORF;ENST00000520711.1_1_8:41368829-41369321:+|nuORF;ENST00000549078.5_1_12:53342924-53344195:+|nuORF;ENST00000577198.5_1_17:26603697-26633156:-|nuORF;ENST00000585825.1_1_17:58887571-58888051:+|nuORF	162.63603312974413	0.004023911058767669	2				NaN	NaN	0	NaN	5837	3250	9087
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9090	26.378	NaN	13618	30	0	1763.3	0.106	+			37399	SLGCPSVVPSP	11	78	521.7661375415247	1041.5177221498493	2	521.7675170898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLGCPSVVPSP_	ENSG00000166444|ENST00000313726|DENND2B	51.19269402634007	0.4047928213175833	2				NaN	NaN	0	NaN	5838	3250	9087
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9091	26.38	NaN	10909	30	0	1616.2	0.106			+	26934	LYGDYHAN	8	79	476.71156768826484	951.4085824433297	2	476.7113342285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LYGDYHAN_	REV__ENSG00000079150|ENST00000424785|FKBP7;REV__ENST00000464248.1_1_2:179330632-179343265:-|nuORF;REV__ENST00000470945.1_1_2:179330657-179343310:-|nuORF;REV__nc|ENSG00000079150|Q9Y680-1|FKBP7;REV__nc|ENSG00000079150|Q9Y680-3|FKBP7	47.91560031466742	0.6071945918984287	2				NaN	NaN	0	NaN	5839	3250	9087
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9092	26.382	NaN	8039	30	0	803.17	0.106	+			1044	AEKNGYVTV	9	74	490.75590361122113	979.4972542892423	2	490.7558288574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEKNGYVTV_	ENSG00000159210|ENST00000502492|SNF8;ENST00000509989.5_1_17:47007839-47014253:-|nuORF;ENST00000514089.5_1_17:47007839-47013524:-|nuORF	101.25262130126117	0.03792372629710479	2				NaN	NaN	0	NaN	5840	3250	9087
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9093	26.383	NaN	15935	30	0	1888.1	0.106	+			14291	GSVYITLKK	9	91	504.8081330387603	1007.6017131443206	2	504.8080139160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GSVYITLKK_	ENSG00000140319|ENST00000267884|SRP14;ENST00000558243.1_1_15:40330963-40331317:-|nuORF;ENST00000558527.5_1_15:40329525-40331317:-|nuORF;ENST00000559475.5_1_15:40329218-40331146:-|nuORF	120.30596017624542	0.02101454110788768	2				NaN	NaN	0	NaN	5841	3250	9087
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9094	26.385	NaN	6113.5	30	0	1718.1	0.033	+			49079	VVKPPGSSL	9	62	442.26603811295195	882.5175232927039	2	442.265869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VVKPPGSSL_	ENSG00000163930|ENST00000460680|BAP1	60.11826168202944	0.21262886028301267	2				NaN	NaN	0	NaN	5842	3250	9087
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9109	26.417	NaN	17948	30	0	5718.3	0.214			+	27236	MELMDARQ	8	78	497.2281392724502	992.4417256117005	2	497.2281494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MELMDARQ_	REV__ENSG00000002822|ENST00000265854|MAD1L1;REV__nc|ENSG00000002822|Q9Y6D9-3|MAD1L1;REV__nc|ENSG00000002822|Q9Y6D9-4|MAD1L1	120.62098272573253	0.23366758524054274	2				NaN	NaN	0	NaN	5854	3253	9108
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9110	26.42	NaN	24700	30	0	3016	0.106	+			33003	REFGANDNMGA	11	92	591.2537511492341	1180.492949365268	2	591.2540283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_REFGANDNMGA_	ENSG00000162896|ENST00000356495|PIGR	62.166158670854095	0.3041191743798417	2				NaN	NaN	0	NaN	5855	3253	9108
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9111	26.422	NaN	18791	30	0	10265	0.106	+			29387	PAPGRPVDPGP	11	74	353.8573296801061	1058.5501596405184	3	353.8575134277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PAPGRPVDPGP_	ENST00000300179.6_1_7:100081575-100084449:+|nuORF	31.634271133179894	0.6579734920221648	2				NaN	NaN	0	NaN	5856	3253	9108
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9112	26.424	NaN	21411	30	0	3409.4	0.106			+	34220	RTEQVEGLPQ	10	88	578.8019395629726	1155.5893261927451	2	578.8016357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RTEQVEGLPQ_	REV__ENST00000312719.9_1_6:114663491-114664094:-|nuORF	112.41091882917199	0.040839805697094264	2				NaN	NaN	0	NaN	5857	3253	9108
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9113	26.426	NaN	16302	30	0	1449.5	0.106	+			28822	NPLQKDPQY	9	87	551.7803353028015	1101.546117672403	2	551.7803344726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NPLQKDPQY_	ENSG00000115685|ENST00000234038|PPP1R7;nc|ENSG00000115685|Q15435-2|PPP1R7;PPP1R7|p.R330W|1|0.49|ENSG00000115685|chr2:241182728-241182728|C/T|missense_variant	164.45504665044191	0.003713414289755139	2				NaN	NaN	0	NaN	5858	3253	9108
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9114	26.428	NaN	10816	30	0	1559.7	0.035				-1	 	0	74	336.5340769935905	1006.5804015809715	3	336.5343322753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5859	3253	9108
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9115	26.428	NaN	4359.4	30	0	537.43	0.138	+			46128	VDLDVVET	8	63	445.2309801633519	NaN	0	445.22991943359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VDLDVVET_	ENSG00000169894|ENST00000379458|MUC3A;nc|ENSG00000169894|Q02505-3|MUC3A;nc|ENSG00000169894|Q02505-4|MUC3A;nc|ENSG00000169894|Q02505-5|MUC3A	50.0245360154114	1.7418937515398478	2				NaN	NaN	0	NaN	5860	3253	9108
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9129	26.459	NaN	313010	30	0	92887	0.154	+			14554	GTFGGLGSK	9	81	412.21928854620705	822.4240241592141	2	412.2189025878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTFGGLGSK_	ENSG00000124942|ENST00000378024|AHNAK	136.26810882979174	0.012230845423532208	2				NaN	NaN	0	NaN	5871	3256	9128
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9130	26.462	NaN	37185	30	0	5029.9	0.106	+			14584	GTFVGVHVR	9	70	486.27480257407433	970.5350522149487	2	486.2745056152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTFVGVHVR_	ENSG00000176920|ENST00000425340|FUT2	122.1759843771914	0.019882474861609503	2				NaN	NaN	0	NaN	5872	3256	9128
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9131	26.464	NaN	19445	30	0	1671	0.106	+			2734	AQYQFTGIKK	10	90	592.3274183463601	1182.6402837595201	2	592.3273315429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AQYQFTGIKK_	ENSG00000173915|ENST00000369815|ATP5MK	139.38205640894643	0.010918844784185366	2				NaN	NaN	0	NaN	5873	3256	9128
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9132	26.466	NaN	8877	30	0	1276.7	0.106	+			14661	GTIDVKELK	9	68	501.7952468697124	1001.5759408062248	2	501.795166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTIDVKELK_	ENSG00000147400|ENST00000370277|CETN2	112.10723106719422	0.02684780151337622	2				NaN	NaN	0	NaN	5874	3256	9128
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9133	26.468	NaN	6459.2	30	0	1389.1	0.106	+			6303	AVSTLGISK	9	61	438.2634905618557	874.5124281905114	2	438.2633972167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVSTLGISK_	ENSG00000103160|ENST00000219439|HSDL1;nc|ENSG00000103160|Q3SXM5-2|HSDL1	78.26377905018397	0.10505600812668463	2				NaN	NaN	0	NaN	5875	3256	9128
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9134	26.469	NaN	10838	30	0	1768.6	0.106	+			30115	PRPLRGRSPG	10	86	546.8253052879538	1091.6360576427076	2	546.824951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PRPLRGRSPG_	ENST00000421671.6_1_6:33754529-33756808:-|nuORF	43.650786325866115	0.5155049133366767	2				NaN	NaN	0	NaN	5876	3256	9128
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9135	26.471	NaN	7565.9	30	0	2473.8	0.033	+			4328	ATGLSGLTK	9	70	424.24828108081255	846.4820092284251	2	424.2476501464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATGLSGLTK_	ENSG00000165949|ENST00000612813|IFI27;nc|ENSG00000165949|P40305-1|IFI27;nc|ENSG00000165949|P40305-3|IFI27;nc|ENSG00000165949|P40305-4|IFI27	70.8162118820467	0.13725933411854815	2				NaN	NaN	0	NaN	5877	3256	9128
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9149	26.501	NaN	112980	30	0	52368	0.179			+	7437	DFETRIDEL	9	90	379.85225066003187	1136.5349225802956	3	379.8526611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DFETRIDEL_	REV__ENSG00000156510|ENST00000354624|HKDC1;REV__ENSG00000156515|ENST00000359426|HK1;REV__ENST00000494253.1_1_10:71098016-71144300:+|nuORF;REV__nc|ENSG00000156510|Q2TB90-2|HKDC1;REV__nc|ENSG00000156510|Q2TB90-3|HKDC1;REV__nc|ENSG00000156515|P19367-2|HK1;REV__nc|ENSG00000156515|P19367-3|HK1;REV__nc|ENSG00000156515|P19367-4|HK1	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	5888	3259	9148
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9150	26.504	NaN	40548	30	0	3284.8	0.106			+	10920	FDLDMQGRR	9	89	569.2752561365252	1136.5359593398503	2	569.27587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FDLDMQGRR_	REV__ENSG00000213213|ENST00000338005|CCDC183;REV__ENST00000371682.7_1_9:139690828-139700853:+|nuORF;REV__ENST00000415992.5_1_9:139693810-139699267:+|nuORF;REV__ENST00000430612.5_1_9:139694306-139700853:+|nuORF;REV__ENST00000479371.5_1_9:139697227-139701184:+|nuORF;REV__nc|ENSG00000213213|Q5T5S1-2|CCDC183;REV__nc|ENSG00000213213|Q5T5S1-3|CCDC183;REV__nc|ENSG00000213213|Q5T5S1-4|CCDC183	72.87924865735499	0.12833875048249987	2				NaN	NaN	0	NaN	5889	3259	9148
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9151	26.506	NaN	14135	30	0	1496.2	0.106			+	2052	ALAAALLPPA	10	73	454.2843348847257	906.5541168362514	2	454.2842102050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ALAAALLPPA_	REV__ENSG00000188038|ENST00000339176|NRN1L;REV__ENST00000576147.1_2_16:67919557-67920159:+|nuORF	54.76467175910256	0.41345489472286195	2				NaN	NaN	0	NaN	5890	3259	9148
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9152	26.508	NaN	10019	30	0	3476	0.106	+			14585	GTFVGVHVR	9	66	324.51865305744695	970.5341297725408	3	324.51898193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTFVGVHVR_	ENSG00000176920|ENST00000425340|FUT2	30.503639358989545	0.5181749237905803	2				NaN	NaN	0	NaN	5891	3259	9148
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9153	26.509	NaN	10960	30	0	1687.4	0.106	+			28330	NEGKHLYTL	9	93	537.7822420396534	1073.5499311461067	2	537.78369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NEGKHLYTL_	ENSG00000204628|ENST00000512805|RACK1	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	5892	3259	9148
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9154	26.511	NaN	35862	30	0	2463.6	0.106	+			18078	IKKEELQEL	9	81	565.3267784139167	1128.6390038946333	2	565.3276977539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IKKEELQEL_	DZIP1|p.K806Nfs*22|1|0.34|ENSG00000134874|chr13:95584842-95584842|T/-|frameshift_variant;ENSG00000134874|ENST00000376829|DZIP1;ENST00000479518.1_1_13:96236855-96239862:-|nuORF;ENST00000485031.5_1_13:96234490-96239991:-|nuORF;nc|ENSG00000134874|Q86YF9-2|DZIP1	168.25843898104137	0.0030641937004078144	2				NaN	NaN	0	NaN	5893	3259	9148
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9155	26.513	NaN	15116	30	0	3006.8	0.036			+	26182	LSRLVASSPV	10	78	343.54125386373477	1027.6019321914043	3	343.5415344238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSRLVASSPV_	REV__ENSG00000119725|ENST00000555044|ZNF410;REV__ENST00000412490.7_1_14:74358863-74376162:+|nuORF;REV__ENST00000541357.6_1_14:74360502-74371669:+|nuORF;REV__nc|ENSG00000119725|Q86VK4-2|ZNF410;REV__nc|ENSG00000119725|Q86VK4-3|ZNF410;REV__nc|ENSG00000119725|Q86VK4-5|ZNF410;REV__ZNF410|p.L434Sfs*8|1|0.04|ENSG00000119725|chr14:73923423-73923424|-/TCTATTT|frameshift_variant	59.93077597824379	0.36646980200755325	2				NaN	NaN	0	NaN	5894	3259	9148
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9168	26.541	NaN	46544	30	0	11682	0.213			+	9549	ELEKQEKLL	9	72	377.2201483431156	1128.6386156295468	3	377.2203369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ELEKQEKLL_	REV__CCDC146|p.E671Qfs*21|1|0.06|ENSG00000135205|chr7:77282647-77282648|-/CAGAGGCAGA|frameshift_variant;REV__CCDC146|p.F933Lfs*10|1|0.43|ENSG00000135205|chr7:77294794-77294794|T/-|frameshift_variant;REV__ENSG00000135205|ENST00000285871|CCDC146;REV__ENST00000461882.1_1_7:76871694-76888407:+|nuORF	71.87747018426188	0.13267044672804276	2				NaN	NaN	0	NaN	5904	3262	9167
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9169	26.544	NaN	19918	30	0	2091.3	0.106	+			42912	TEIEGTQKL	9	81	509.77420569241013	1017.5338584516203	2	509.77435302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEIEGTQKL_	ENSG00000120899|ENST00000346049|PTK2B;nc|ENSG00000120899|Q14289-2|PTK2B	139.97047562133406	0.010493916756945389	2				NaN	NaN	0	NaN	5905	3262	9167
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9170	26.547	NaN	8627.9	30	0	2789.1	0.106	+			43669	TIYSSRSLI	9	66	347.1974441191488	1038.5705029576466	3	347.197509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TIYSSRSLI_	ENST00000401878.7_2_7:155573289-155573589:+|nuORF	31.954861631926434	0.5046124803899898	2				NaN	NaN	0	NaN	5906	3262	9167
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9171	26.548	NaN	16412	30	0	1713.5	0.106	+			42764	TDSTIEVDSV	10	80	533.2492412227804	1064.4839295123606	2	533.2509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TDSTIEVDSV_	ENSG00000054267|ENST00000264183|ARID4B;ENST00000491632.5_1_1:235341091-235490234:-|nuORF;ENST00000494543.1_1_1:235344410-235345179:-|nuORF;nc|ENSG00000054267|Q4LE39-2|ARID4B;nc|ENSG00000054267|Q4LE39-3|ARID4B;nc|ENSG00000054267|Q4LE39-4|ARID4B	56.72105179125745	0.3956618550748046	2				NaN	NaN	0	NaN	5907	3262	9167
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9172	26.55	NaN	9608.5	30	0	1105.2	0.106	+			3879	ATAPVSAAQLK	11	81	528.8060731582341	1055.597593383268	2	528.8060302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATAPVSAAQLK_	ENSG00000148584|ENST00000373997|A1CF;nc|ENSG00000148584|Q9NQ94-3|A1CF;nc|ENSG00000148584|Q9NQ94-4|A1CF;nc|ENSG00000148584|Q9NQ94-5|A1CF;nc|ENSG00000148584|Q9NQ94-6|A1CF;nc|ENSG00000148584|Q9NQ94|A1CF	41.080066990542036	0.5431644350485484	2				NaN	NaN	0	NaN	5908	3262	9167
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9173	26.552	NaN	11630	30	0	4400.4	0.106	+			37596	SLPLVDTHSK	10	72	548.8049141254882	1095.5952753177762	2	548.8035278320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLPLVDTHSK_	ENSG00000026025|ENST00000544301|VIM;ENST00000487938.5_1_10:17278234-17279267:+|nuORF	53.08895987439943	0.42869529153390606	2				NaN	NaN	0	NaN	5909	3262	9167
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9174	26.554	NaN	5690.3	30	0	743.2	0.035	+			11708	FSAESSRSL	9	65	492.2431999149708	982.4718468967416	2	492.2430114746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FSAESSRSL_	DOCK7|p.F1836Dfs*12|1|0.05|ENSG00000116641|chr1:62477795-62477796|-/TGTC|frameshift_variant;ENSG00000116641|ENST00000635253|DOCK7;nc|ENSG00000116641|Q96N67-2|DOCK7;nc|ENSG00000116641|Q96N67-3|DOCK7;nc|ENSG00000116641|Q96N67-4|DOCK7;nc|ENSG00000116641|Q96N67-5|DOCK7;nc|ENSG00000116641|Q96N67-6|DOCK7	74.1650062923329	0.12277912660386392	2				NaN	NaN	0	NaN	5910	3262	9167
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9192	26.591	NaN	30029	30	0	2885.3	0.214	+			14076	GSLDQVLKK	9	84	494.29543790493113	986.5763228766623	2	494.2951354980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSLDQVLKK_	ENSG00000169032|ENST00000307102|MAP2K1;ENST00000425818.2_1_15:66679685-66737158:+|nuORF;MAP2K1|p.A284Gfs*2|1|0.06|ENSG00000169032|chr15:66485144-66485145|-/T|frameshift_variant	158.07458414430337	0.004987072822166904	2				NaN	NaN	0	NaN	5925	3265	9191
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9193	26.595	NaN	27290	30	0	1992.2	0.106	+			36117	SEKNMISKL	9	84	525.2863494706096	1048.558146008019	2	525.2869262695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEKNMISKL_	ENSG00000036257|ENST00000264414|CUL3;nc|ENSG00000036257|Q13618-2|CUL3;nc|ENSG00000036257|Q13618-3|CUL3	148.6902309647307	0.00717441509122429	2				NaN	NaN	0	NaN	5926	3265	9191
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9194	26.597	NaN	8444.3	30	0	1016.7	0.106	+			22735	KVAVVLIQK	9	67	333.2302596954548	996.6689496865644	3	333.23040771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KVAVVLIQK_	ENSG00000168538|ENST00000334690|TRAPPC11;ENST00000509857.5_1_4:184585182-184595983:+|nuORF;nc|ENSG00000168538|Q7Z392-3|TRAPPC11;nc|ENSG00000168538|Q7Z392-4|TRAPPC11;TRAPPC11|p.T366Pfs*9|1|0.25|ENSG00000168538|chr4:183680246-183680246|A/-|frameshift_variant	51.19269402634007	0.2889735674168909	2				NaN	NaN	0	NaN	5927	3265	9191
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9195	26.599	NaN	13000	30	0	4196	0.106			+	24346	LFLLLIRAM	9	80	363.89972649194794	1088.677350076044	3	363.89990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LFLLLIRAM_	REV__ENSG00000125879|ENST00000246081|OTOR	27.882242232435846	0.5426732730940306	2				NaN	NaN	0	NaN	5928	3265	9191
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9196	26.601	NaN	12233	30	0	1320.2	0.106			+	9490	EKSPFTKRA	9	82	532.2991774167836	1062.583801900367	2	532.2996215820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EKSPFTKRA_	REV__ENSG00000117598|ENST00000263177|PLPPR5;REV__nc|ENSG00000117598|Q32ZL2-2|PLPPR5	56.72105179125745	0.24094814563026265	2				NaN	NaN	0	NaN	5929	3265	9191
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9197	26.602	NaN	7548.9	30	0	868.99	0.037	+			36952	SILRNPVTNK	10	81	571.3382172103896	1140.6618814875792	2	571.3384399414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SILRNPVTNK_	ENSG00000131876|ENST00000254193|SNRPA1;ENST00000558036.5_1_15:101827046-101835383:-|nuORF;ENST00000558059.5_1_15:101827046-101835071:-|nuORF	86.88156770896713	0.14892753630261096	2				NaN	NaN	0	NaN	5930	3265	9191
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9198	26.603	NaN	3813.2	30	0	649.87	0.144			+	9620	ELPNYINR	8	54	340.18190727112983	1017.5238924135895	3	340.18194580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ELPNYINR_	REV__TENM3|p.P1918L|1|0.46|ENSG00000218336|chr4:182792425-182792425|C/T|missense_variant	35.200714571348534	0.6875396545722289	2				NaN	NaN	0	NaN	5931	3265	9191
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9212	26.634	NaN	21286	30	0	5758.8	0.214	+			38891	SSPCHIEM	8	74	480.6988364564878	959.3831199797756	2	480.69903564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SSPC(Carbamidomethyl (C))HIEM_	ENSG00000265681|ENST00000580261|RPL17;ENST00000414070.1_1_1:109535017-109535455:+|nuORF;ENST00000446498.1_1_1:26781156-26781564:-|nuORF;ENST00000452862.1_1_3:197577273-197577471:-|nuORF;ENST00000498256.1_1_8:29489773-29490157:+|nuORF;nc|ENSG00000265681|P18621-2|RPL17;nc|ENSG00000265681|P18621-3|RPL17	82.30502934623384	0.30436709589983096	2				NaN	NaN	0	NaN	5942	3268	9211
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9213	26.638	NaN	12974	30	0	2933.6	0.106	+			49451	VVVPPVGAK	9	59	433.2789921458761	864.5434313585522	2	433.2786865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVVPPVGAK_	ENSG00000125844|ENST00000377813|RRBP1;RRBP1|p.A628Gfs*69|1|0.35|ENSG00000125844|chr20:17621915-17621916|-/T|frameshift_variant	47.91560031466742	0.327412564698279	2				NaN	NaN	0	NaN	5943	3268	9211
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9214	26.64	NaN	7277.9	30	0	852.08	0.106	+			15703	GVNPYILKK	9	76	516.316029361027	1030.6175057888538	2	516.3160400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GVNPYILKK_	ENSG00000101019|ENST00000374385|UQCC1;nc|ENSG00000101019|Q9NVA1-3|UQCC1;nc|ENSG00000101019|Q9NVA1-4|UQCC1;nc|ENSG00000101019|Q9NVA1-5|UQCC1	79.45101966838831	0.09992237243120712	2				NaN	NaN	0	NaN	5944	3268	9211
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9215	26.642	NaN	7483.7	30	0	708.8	0.106			+	-1	ATISLCNIM	9	76	519.7516062947684	1037.4886596563367	2	519.7516479492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_ATISLC(Carbamidomethyl (C))NIM(Oxidation (M))_	REV__ENST00000371460.5_3_6:45289623-45345531:-|nuORF	47.657333605630114	0.33044192980041115	2				NaN	NaN	0	NaN	5945	3268	9211
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9216	26.644	NaN	10523	30	0	4895.1	0.106			+	10021	ERSVEIPKRE	10	79	621.8434976474508	1241.6724423617015	2	621.8435668945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ERSVEIPKRE_	REV__ENSG00000120798|ENST00000333003|NR2C1;REV__nc|ENSG00000120798|P13056-2|NR2C1;REV__nc|ENSG00000120798|P13056-3|NR2C1	38.753607047826485	0.5606299674732264	2				NaN	NaN	0	NaN	5946	3268	9211
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9217	26.645	NaN	7508.6	30	0	550.02	0.106	+			28901	NQLLIHAALN	10	80	553.8196439805411	1105.624735027882	2	553.8202514648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NQLLIHAALN_	ENSG00000075234|ENST00000381031|TTC38	40.05817265558897	0.5486090488315611	2				NaN	NaN	0	NaN	5947	3268	9211
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9218	26.647	NaN	9110	30	0	1679.5	0.035	+			3954	ATATIATLQK	10	75	509.3003868069218	1016.5862206806436	2	509.30084228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATATIATLQK_	ENSG00000163694|ENST00000295971|RBM47;ENST00000510871.5_1_4:40427923-40438677:-|nuORF;nc|ENSG00000163694|A0AV96-2|RBM47	96.66504779109242	0.09291513985748291	2				NaN	NaN	0	NaN	5948	3268	9211
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9233	26.679	NaN	23322	30	0	6015	0.214	+			41989	SVYGYGVQK	9	76	500.75861310613726	999.5026732790745	2	500.75836181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVYGYGVQK_	ENSG00000107164|ENST00000319725|FUBP3;FUBP3|p.P395Lfs*27|2|0.27|ENSG00000107164|chr9:130630689-130630689|C/-|frameshift_variant	95.81516180277367	0.04847050768394289	2				NaN	NaN	0	NaN	5960	3271	9232
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9234	26.682	NaN	13028	30	0	7333.1	0.106	+			1965	AIYEPKTFK	9	73	366.2059513857424	1095.5960247574274	3	366.2060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AIYEPKTFK_	ENSG00000242485|ENST00000344843|MRPL20	31.954861631926434	0.5046124803899898	2				NaN	NaN	0	NaN	5961	3271	9232
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9235	26.684	NaN	11069	30	0	1270	0.106	+			36964	SIMDPNQNVK	10	75	573.2850014248786	1144.555449916557	2	573.2849731445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SIMDPNQNVK_	ENSG00000115963|ENST00000263895|RND3	41.42661286455405	0.5359995577334734	2				NaN	NaN	0	NaN	5962	3271	9232
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9236	26.686	NaN	7510.4	30	0	3619.7	0.106			+	9167	EGPIGHLGP	9	59	438.7324470619553	875.4503411907107	2	438.7321472167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EGPIGHLGP_	REV__COL4A5|p.F1520Vfs*34|1|0.04|ENSG00000188153|chrX:108692794-108692795|-/GTAATAAATATACTATA|frameshift_variant;REV__COL4A5|p.M1519Ifs*7|1|0.04|ENSG00000188153|chrX:108692793-108692794|-/A|frameshift_variant;REV__ENSG00000188153|ENST00000328300|COL4A5;REV__ENST00000483338.1_1_X:107826116-107869594:+|nuORF;REV__nc|ENSG00000188153|P29400|COL4A5	60.29395666154354	0.21116425950210296	2				NaN	NaN	0	NaN	5963	3271	9232
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9237	26.688	NaN	5311.5	30	0	811.29	0.106				-1	SVVMMVNNL	9	75	346.8364439604557	1037.4875024815672	3	346.8367004394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Oxidation (M)	_SVVM(Oxidation (M))M(Oxidation (M))VNNL_	ENSG00000149476|ENST00000394900|TKFC;ENST00000524953.1_1_11:61110045-61110363:+|nuORF;nc|ENSG00000149476|Q3LXA3-2|TKFC	31.529811441608018	0.5085848003137583	2				NaN	NaN	0	NaN	5964	3271	9232
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9238	26.69	NaN	8239.5	30	0	843.41	0.035	+			1186	AENPGKYNI	9	78	503.25403723328816	1004.4935215333763	2	503.2539978027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AENPGKYNI_	ENSG00000153187|ENST00000640218|HNRNPU;nc|ENSG00000153187|Q00839-2|HNRNPU	65.46538089061403	0.16805504838372562	2				NaN	NaN	0	NaN	5965	3271	9232
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9239	26.69	NaN	4465.9	30	0	1284.3	0.139	+			24016	LEEANRVL	8	61	472.2629439143921	942.5113348955842	2	472.263916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LEEANRVL_	ENSG00000132275|ENST00000254605|RRP8;ENST00000526352.5_1_11:6621466-6622302:-|nuORF	51.33545320467046	0.5859736979383976	2				NaN	NaN	0	NaN	5966	3271	9232
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9253	26.722	NaN	17362	30	0	3143.2	0.214	+			24063	LEKAENQVL	9	76	522.2895146947791	1042.564476456358	2	522.2905883789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LEKAENQVL_	ENSG00000185825|ENST00000345046|BCAP31;ENST00000563143.2_1_16:32882346-32883351:+|nuORF;nc|ENSG00000185825|P51572-2|BCAP31	134.7655990226056	0.012935733000282069	2				NaN	NaN	0	NaN	5977	3274	9252
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9254	26.725	NaN	11290	30	0	1587.1	0.106	+			15566	GVGEVLHVK	9	65	469.2771011955805	936.539649457961	2	469.2766418457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GVGEVLHVK_	ENSG00000213676|ENST00000375203|ATF6B;ENST00000495579.5_1_6:32088425-32095984:-|nuORF;nc|ENSG00000213676|Q99941-2|ATF6B	122.1759843771914	0.019882474861609503	2				NaN	NaN	0	NaN	5978	3274	9252
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9255	26.728	NaN	19935	30	0	3887.7	0.106	+			15634	GVLGGYIQKK	10	79	531.8195945540734	1061.6246361749468	2	531.8194580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GVLGGYIQKK_	ENSG00000139687|ENST00000267163|RB1;ENST00000525036.1_1_13:48877982-48934322:+|nuORF;RB1|p.L561Mfs*9|1|0.07|ENSG00000139687|chr13:48381428-48381432|CCTTG/-|frameshift_variant;RB1|p.V654Cfs*4|1|0.33|ENSG00000139687|chr13:48456343-48456343|A/-|frameshift_variant;RB1|p.Y529*|1|0.23|ENSG00000139687|chr13:48381334-48381335|AC/-|frameshift_variant;RB1|p.Y529Tfs*3|1|0.08|ENSG00000139687|chr13:48381329-48381329|T/-|frameshift_variant	84.9155231211612	0.16018353804806162	2				NaN	NaN	0	NaN	5979	3274	9252
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9256	26.729	NaN	5336	30	0	564.94	0.106	+			48842	VVAVLLTKK	9	67	485.83668902566956	969.6588251181391	2	485.83648681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVAVLLTKK_	ENSG00000169710|ENST00000306749|FASN;FASN|p.A413Hfs*39|2|0.47|ENSG00000169710|chr17:82091478-82091478|G/-|frameshift_variant	87.69643885390035	0.07135982304947239	2				NaN	NaN	0	NaN	5980	3274	9252
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9257	26.731	NaN	6481	30	0	1185.3	0.106	+			20261	KENDMAQSL	9	74	518.2425223902817	1034.4704918473633	2	518.2424926757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KENDMAQSL_	ENSG00000163545|ENST00000367157|NUAK2	53.08895987439943	0.27122541748218487	2				NaN	NaN	0	NaN	5981	3274	9252
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9258	26.733	NaN	5705.6	30	0	795.67	0.033	+			37651	SLQQVLPL	8	73	449.273944779883	896.533336626566	2	449.273681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLQQVLPL_	ENSG00000158748|ENST00000289753|HTR6	58.78195531508484	0.5138399468736706	2				NaN	NaN	0	NaN	5982	3274	9252
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9259	26.734	NaN	7993.1	30	0	831.31	0.14	+			25342	LPDTRSEAY	9	78	526.2559733971734	1050.4973938611467	2	526.2568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LPDTRSEAY_	ENSG00000129315|ENST00000261900|CCNT1;nc|ENSG00000129315|O60563-2|CCNT1	67.49366992349736	0.1516260258713357	2				NaN	NaN	0	NaN	5983	3274	9252
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9275	26.769	NaN	10826	30	0	1391.1	0.214				-1	 	0	78	336.5340769935905	1006.5804015809715	3	336.53436279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5996	3277	9274
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9276	26.772	NaN	14926	30	0	1326.5	0.106			+	20807	KIELELQKE	9	86	565.3267784139167	1128.6390038946333	2	565.3308715820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KIELELQKE_	REV__ENSG00000083937|ENST00000263780|CHMP2B	112.41091882917199	0.026537921851008135	2				NaN	NaN	0	NaN	5997	3277	9274
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9277	26.774	NaN	6360.4	30	0	746.94	0.106			+	44057	TPRYVTLGL	9	81	510.29788783428023	1018.5812227353605	2	510.298095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TPRYVTLGL_	REV__ENSG00000141040|ENST00000395825|ZNF287	42.396135135203025	0.392153681582562	2				NaN	NaN	0	NaN	5998	3277	9274
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9278	26.776	NaN	4037.2	30	0	525.26	0.106				-1	 	0	72	384.7720451196625	767.529537306125	2	384.77227783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	5999	3277	9274
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9279	26.778	NaN	4010.5	30	0	480.58	0.106	+			22666	KTYQDIQNTIK	11	78	676.3654834574082	1350.7164139816164	2	676.3650512695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KTYQDIQNTIK_	ENSG00000181222|ENST00000674977|POLR2A;nc|ENSG00000181222|P24928|POLR2A	66.32627574692302	0.2669844048574283	2				NaN	NaN	0	NaN	6000	3277	9274
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9280	26.78	NaN	7187.9	30	0	2246	0.037	+			30780	QDTYGQQWK	9	80	577.2674753287514	1152.5203977243027	2	577.2676391601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QDTYGQQWK_	ENSG00000125944|ENST00000302271|HNRNPR;nc|ENSG00000125944|O43390-2|HNRNPR;nc|ENSG00000125944|O43390-3|HNRNPR;nc|ENSG00000125944|O43390-4|HNRNPR	62.107414245175825	0.1960472003779324	2				NaN	NaN	0	NaN	6001	3277	9274
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9281	26.78	NaN	4611.9	30	0	1410	0.145				-1	FFQKLSCTL	9	45	381.8686042738481	NaN	0	381.8687438964844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_FFQKLSC(Carbamidomethyl (C))TL_	ENSG00000157927|ENST00000399583|RADIL;nc|ENSG00000157927|Q96JH8-1|RADIL;nc|ENSG00000157927|Q96JH8-2|RADIL;RADIL|p.G882Wfs*32|2|0.35|ENSG00000157927|chr7:4801852-4801853|-/G|frameshift_variant;RADIL|p.P881Lfs*110|4|0.34|ENSG00000157927|chr7:4801853-4801853|G/-|frameshift_variant	27.882242232435846	0.3367954786602879	2				NaN	NaN	0	NaN	6002	3277	9274
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9295	26.812	NaN	18325	30	0	2056.3	0.214	+			29321	NYQNVVHKL	9	88	557.803878989904	1113.5932050466079	2	557.8040161132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NYQNVVHKL_	ENSG00000146463|ENST00000314607|ZMYM4;nc|ENSG00000146463|Q5VZL5-2|ZMYM4;nc|ENSG00000146463|Q5VZL5-3|ZMYM4;nc|ENSG00000146463|Q5VZL5-4|ZMYM4;ZMYM4|p.A956Sfs*68|1|0.38|ENSG00000146463|chr1:35393690-35393691|-/A|frameshift_variant;ZMYM4|p.D1229Ifs*2|1|0.12|ENSG00000146463|chr1:35405175-35405175|G/-|frameshift_variant;ZMYM4|p.N1222Kfs*15|1|0.25|ENSG00000146463|chr1:35405154-35405155|-/A|frameshift_variant;ZMYM4|p.Y806Ifs*12|1|0.16|ENSG00000146463|chr1:35389058-35389059|-/A|frameshift_variant	171.53180478179638	0.0025054460641941692	2				NaN	NaN	0	NaN	6013	3280	9294
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9296	26.815	NaN	18406	30	0	2688.1	0.106			+	-1	QCNIECHNGA	10	86	573.2260372777196	1144.437521622239	2	573.2269287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_QC(Carbamidomethyl (C))NIECHNGA_	REV__ENSG00000172167|ENST00000305949|MTBP;REV__MTBP|p.F354Lfs*11|1|0.23|ENSG00000172167|chr8:120470830-120470830|T/-|frameshift_variant;REV__MTBP|p.K383Sfs*12|1|0.11|ENSG00000172167|chr8:120470916-120470916|A/-|frameshift_variant;REV__nc|ENSG00000172167|Q96DY7-3|MTBP	56.72105179125745	0.3956618550748046	2				NaN	NaN	0	NaN	6014	3280	9294
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9297	26.817	NaN	13029	30	0	1064.8	0.106	+			9670	ELTQNQVVL	9	81	522.2895146947791	1042.564476456358	2	522.7883911132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ELTQNQVVL_	ENSG00000104164|ENST00000220531|BLOC1S6	65.46538089061403	0.16805504838372562	2				NaN	NaN	0	NaN	6015	3280	9294
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9298	26.819	NaN	11316	30	0	4167.1	0.106	+			45125	TVKEVDLLK	9	85	348.88123621894266	1043.621879257028	3	348.8813781738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TVKEVDLLK_	MAP4|p.G501D|1|0.04|ENSG00000047849|chr3:47916325-47916325|C/T|missense_variant	80.45461616416974	0.09558281504443908	2				NaN	NaN	0	NaN	6016	3280	9294
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9299	26.821	NaN	7626	30	0	785.06	0.106	+			51453	YVFSGSRLK	9	72	528.7955922066051	1055.57663148001	2	528.7957763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YVFSGSRLK_	ENSG00000197157|ENST00000354725|SND1;GAS2L3-SND1|1|fusion	85.86182877749512	0.07653218437724067	2				NaN	NaN	0	NaN	6017	3280	9294
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9300	26.823	NaN	7767.6	30	0	1148.7	0.036			+	28472	NFVRNFIR	8	77	533.2998130300316	NaN	0	533.2977294921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NFVRNFIR_	REV__ENSG00000137941|ENST00000260505|TTLL7;REV__ENST00000480174.5_1_1:84335647-84372167:-|nuORF;REV__ENST00000488014.5_1_1:84352960-84383379:-|nuORF;REV__nc|ENSG00000137941|Q6ZT98-3|TTLL7;REV__TTLL7|p.R773H|1|0.37|ENSG00000137941|chr1:83890372-83890372|C/T|missense_variant	53.351449002276354	1.7418937515398478	2				NaN	NaN	0	NaN	6018	3280	9294
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9301	26.823	NaN	24604	30	0	12653	0.141	+			30845	QEGAKMAVRL	10	85	551.8051320473947	1101.5957111615894	2	551.8048095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QEGAKMAVRL_	CTNNB1|p.L301Hfs*16|1|0.05|ENSG00000168036|chr3:41225827-41225831|TTCAA/-|frameshift_variant;ENSG00000168036|ENST00000349496|CTNNB1;ENSG00000173801|ENST00000393931|JUP	117.7056744995986	0.030570130731382417	2				NaN	NaN	0	NaN	6019	3280	9294
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9312	26.851	NaN	370700	30	0	138330	0.163	+			6648	AYVHMVTHF	9	101	374.17937917449217	1119.5163081236765	3	374.17962646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_AYVHM(Oxidation (M))VTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	49.44154591367651	0.3095138337212152	2				NaN	NaN	0	NaN	6027	3283	9311
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9313	26.853	NaN	99183	30	0	16433	0.106	+			6652	AYVHMVTHF	9	94	560.765681519703	1119.5168101062059	2	560.7660522460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_AYVHM(Oxidation (M))VTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	123.9887779854562	0.018785054595953452	2				NaN	NaN	0	NaN	6028	3283	9311
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9314	26.855	NaN	13060	30	0	1387.5	0.106	+			36736	SGVSLAALKK	10	83	487.30559709746103	972.5966412617221	2	487.3053894042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SGVSLAALKK_	ENSG00000124575|ENST00000244534|H1-3;ENSG00000168298|ENST00000304218|H1-4;ENSG00000187837|ENST00000343677|H1-2	123.20810148215591	0.02279876478776198	2				NaN	NaN	0	NaN	6029	3283	9311
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9315	26.857	NaN	18169	30	0	5513.7	0.106	+			34808	RYLEKPMEI	9	71	398.87777107456	1193.61148382388	3	398.8777160644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_RYLEKPM(Oxidation (M))EI_	ENSG00000168610|ENST00000264657|STAT3;nc|ENSG00000168610|P40763-2|STAT3;nc|ENSG00000168610|P40763-3|STAT3;STAT3|p.R729Afs*3|2|0.33|ENSG00000168610|chr17:42316861-42316861|G/-|frameshift_variant	72.87924865735499	0.12833875048249987	2				NaN	NaN	0	NaN	6030	3283	9311
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9316	26.859	NaN	6379.1	30	0	1962.5	0.106				-1	MRVCGATVP	9	60	495.74561326854143	989.4766736038829	2	495.74542236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_MRVC(Carbamidomethyl (C))GATVP_	ENST00000588565.5_1_17:76480964-76481042:+|nuORF	27.882242232435846	0.5426732730940306	2				NaN	NaN	0	NaN	6031	3283	9311
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9317	26.861	NaN	9339.4	30	0	687.96	0.106	+			36032	SEIQEEKPEPV	11	77	642.8192702003086	1283.623987467417	2	642.8196411132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SEIQEEKPEPV_	ENSG00000145907|ENST00000356245|G3BP1	144.76815839617436	0.0001301093758938492	2				NaN	NaN	0	NaN	6032	3283	9311
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9318	26.863	NaN	11397	30	0	1413.9	0.033	+			11780	FSMAFRGA	8	68	443.715397211902	885.416241490604	2	443.7154846191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FSMAFRGA_	ENST00000569795.5_1_15:72558271-72559838:-|nuORF	42.47446043378293	0.6409579893742323	2				NaN	NaN	0	NaN	6033	3283	9311
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9319	26.863	NaN	6306.6	30	0	1895.2	0.138			+	13473	GLLGAGCDM	9	69	455.1937710231871	908.3729891131742	2	455.1935729980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Carbamidomethyl (C),Oxidation (M)	_GLLGAGC(Carbamidomethyl (C))DM(Oxidation (M))_	REV__ENSG00000179222|ENST00000326587|MAGED1;REV__ENST00000485420.5_1_X:51636757-51640983:+|nuORF;REV__ENST00000494718.5_1_X:51637400-51640272:+|nuORF;REV__MAGED1|p.P628Rfs*18|1|0.09|ENSG00000179222|chrX:51900215-51900215|C/-|frameshift_variant;REV__nc|ENSG00000179222|Q9Y5V3-2|MAGED1	44.53106598305862	0.36711179743858174	2				NaN	NaN	0	NaN	6034	3283	9311
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9331	26.89	NaN	23286	30	0	4937.8	0.214				-1	 	0	64	322.19340991160374	642.3722668900075	2	322.19354248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6043	3286	9330
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9332	26.894	NaN	19498	30	0	2917.8	0.106	+			51479	YVHMVTHF	8	79	525.2477378639967	1048.4809227947933	2	525.2474975585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_YVHM(Oxidation (M))VTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	96.04771818265245	0.25916207331555047	2				NaN	NaN	0	NaN	6044	3286	9330
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9333	26.896	NaN	8969.3	30	0	1918.2	0.106			+	13269	GITATAGMPI	10	72	466.2491756955622	NaN	0	466.2491455078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GITATAGMPI_	REV__sp|F5HHH2|UL142_HCMVMMembraneglycoproteinUL142OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL142PE=1SV=1	58.78195531508484	0.24422493511477816	2				NaN	NaN	0	NaN	6045	3286	9330
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9334	26.898	NaN	9340.2	30	0	1918.4	0.106	+			43989	TPGPREVL	8	70	434.7477667984314	867.4809806636629	2	434.74749755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TPGPREVL_	ENST00000220062.8_1_15:65345900-65346110:-|nuORF	50.0245360154114	0.5941082100236891	2				NaN	NaN	0	NaN	6046	3286	9330
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9335	26.9	NaN	10250	30	0	1267.1	0.106			+	18192	IMGLVCFSFL	10	82	565.2947160421103	1128.5748791510205	2	565.2960815429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IMGLVCFSFL_	REV__tr|U7T5K3|U7T5K3_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00087PE=4SV=1	47.91560031466742	0.4762067885998563	2				NaN	NaN	0	NaN	6047	3286	9330
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9336	26.902	NaN	19583	30	0	2533.1	0.106	+			22405	KTIVFVETK	9	87	532.821315068577	1063.6280772039538	2	532.8216552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KTIVFVETK_	DDX5|p.D424Ifs*31|1|0.03|ENSG00000108654|chr17:64500720-64500721|-/AAGCAATTAAT|frameshift_variant;DDX5|p.D572Nfs*6|1|0.04|ENSG00000108654|chr17:64500054-64500055|-/TGACAAGATAGTT|frameshift_variant;DDX5|p.R502Gfs*87|1|0.21|ENSG00000108654|chr17:64500264-64500264|T/-|frameshift_variant;ENSG00000108654|ENST00000225792|DDX5;ENST00000581230.5_1_17:62498125-62502378:-|nuORF;nc|ENSG00000108654|P17844-2|DDX5	159.33581866081465	0.004693099277440949	2				NaN	NaN	0	NaN	6048	3286	9330
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9337	26.903	NaN	6741.8	30	0	2241.5	0.036			+	27013	LYRKELTP	8	62	340.53407472007393	1018.5803947604218	3	340.5343933105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LYRKELTP_	REV__PPFIA2|p.T341P|1|0.22|ENSG00000139220|chr12:81375906-81375906|T/G|missense_variant	26.79610172149135	0.7524337208463756	2				NaN	NaN	0	NaN	6049	3286	9330
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9351	26.933	NaN	39569	30	0	6219.6	0.214	+			14856	GTLMWHQMK	9	92	574.2730353414915	1146.531517749783	2	574.2733764648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_GTLM(Oxidation (M))WHQMK_	ENST00000346169.6_1_3:184032401-184033585:+|nuORF;ENST00000352767.7_2_3:184032446-184033585:+|nuORF	101.60071028292904	0.0375685401170269	2				NaN	NaN	0	NaN	6060	3289	9350
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9352	26.937	NaN	21853	30	0	3796.5	0.106	+			29088	NTMNQFVNK	9	74	548.2661520523077	1094.5177511714153	2	548.2666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NTMNQFVNK_	ENSG00000168090|ENST00000303904|COPS6	158.07458414430337	0.004987072822166904	2				NaN	NaN	0	NaN	6061	3289	9350
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9353	26.939	NaN	11610	30	0	840.57	0.106	+			40695	SVAVLRGIQK	10	81	535.8385094336224	1069.6624659340448	2	535.8380126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVAVLRGIQK_	ENSG00000058600|ENST00000299853|POLR3E;ENST00000564061.5_1_16:22308800-22337695:+|nuORF;ENST00000569787.1_1_16:22328322-22336592:+|nuORF;nc|ENSG00000058600|Q9NVU0-2|POLR3E;nc|ENSG00000058600|Q9NVU0-3|POLR3E;nc|ENSG00000058600|Q9NVU0-4|POLR3E;nc|ENSG00000058600|Q9NVU0-5|POLR3E;POLR3E|p.G595Afs*51|1|0.33|ENSG00000058600|chr16:22326189-22326189|C/-|frameshift_variant;POLR3E|p.P340Lfs*35|1|0.38|ENSG00000058600|chr16:22322880-22322880|C/-|frameshift_variant	96.0336014099291	0.09653029772959643	2				NaN	NaN	0	NaN	6062	3289	9350
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9354	26.941	NaN	7852	30	0	3485.2	0.106	+			14197	GSSASLVLK	9	51	431.25562278603184	860.4966926388637	2	431.2554016113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GSSASLVLK_	ENSG00000075415|ENST00000552981|SLC25A3;ENST00000546766.5_1_12:98989476-98995303:+|nuORF;ENST00000547869.1_1_12:98994914-98995303:+|nuORF;ENST00000551123.5_1_12:98989412-98995303:+|nuORF;nc|ENSG00000075415|Q00325|SLC25A3	85.16082228582465	0.07850854922700509	2				NaN	NaN	0	NaN	6063	3289	9350
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9355	26.942	NaN	7773.6	30	0	998.2	0.106			+	-1	PMPPMNPDFPP	11	74	628.276484931463	1254.5384169297258	2	628.27783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_PMPPM(Oxidation (M))NPDFPP_	REV__ENSG00000113649|ENST00000679501|TCERG1;REV__ENST00000507175.5_1_5:145826912-145859658:+|nuORF;REV__nc|ENSG00000113649|O14776-2|TCERG1;REV__nc|ENSG00000113649|O14776|TCERG1;REV__TCERG1|p.I983Nfs*3|1|0.36|ENSG00000113649|chr5:146507901-146507902|-/A|frameshift_variant;REV__TCERG1|p.I983Sfs*41|1|0.35|ENSG00000113649|chr5:146507902-146507902|A/-|frameshift_variant;REV__TCERG1|p.K627Nfs*37|1|0.1|ENSG00000113649|chr5:146480083-146480083|A/-|frameshift_variant;REV__TCERG1|p.K957Rfs*17|1|0.28|ENSG00000113649|chr5:146507160-146507160|A/-|frameshift_variant;REV__TCERG1|p.M735Nfs*8|1|0.26|ENSG00000113649|chr5:146493003-146493004|-/A|frameshift_variant	62.107414245175825	0.30464354921554965	2				NaN	NaN	0	NaN	6064	3289	9350
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9356	26.944	NaN	8505.5	30	0	735.84	0.037	+			28800	NPHQQYSVY	9	73	568.2618962345055	1134.5092395358108	2	568.2620239257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NPHQQYSVY_	ENSG00000161813|ENST00000398473|LARP4;ENST00000521120.1_1_12:50835423-50848201:+|nuORF;LARP4|p.N373Ifs*3|1|0.26|ENSG00000161813|chr12:50454408-50454408|A/-|frameshift_variant;nc|ENSG00000161813|Q71RC2-2|LARP4;nc|ENSG00000161813|Q71RC2-3|LARP4;nc|ENSG00000161813|Q71RC2-4|LARP4;nc|ENSG00000161813|Q71RC2-6|LARP4;nc|ENSG00000161813|Q71RC2-7|LARP4	93.19546047674547	0.05585629608842056	2				NaN	NaN	0	NaN	6065	3289	9350
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9357	26.945	NaN	10307	30	0	909.07	0.14	+			670	AEAITSQKL	9	78	480.77174908844995	959.5289452436999	2	480.7713317871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AEAITSQKL_	ENSG00000203697|ENST00000366872|CAPN8	96.0336014099291	0.047854655524928534	2				NaN	NaN	0	NaN	6066	3289	9350
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9371	26.975	NaN	17300	30	0	1264.4	0.214	+			939	AEIQGNINKV	10	83	543.3011885339678	1084.5878241347355	2	543.301513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEIQGNINKV_	ENSG00000140575|ENST00000268182|IQGAP1;ENSG00000145703|ENST00000274364|IQGAP2;IQGAP1|p.N941Ifs*8|1|0.43|ENSG00000140575|chr15:90476693-90476693|A/-|frameshift_variant;IQGAP1|p.S1529Afs*10|1|0.15|ENSG00000140575|chr15:90492665-90492665|A/-|frameshift_variant;IQGAP2|p.K608Nfs*42|1|0.36|ENSG00000145703|chr5:76637072-76637072|A/-|frameshift_variant;IQGAP2|p.Q1499Rfs*15|1|0.05|ENSG00000145703|chr5:76701201-76701202|-/CCGAG|frameshift_variant;IQGAP2|p.T881Hfs*2|2|0.3|ENSG00000145703|chr5:76665133-76665133|A/-|frameshift_variant	114.8945686534367	0.03454040281423369	2				NaN	NaN	0	NaN	6077	3292	9370
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9372	26.979	NaN	11004	30	0	710.02	0.106			+	9422	EKITLAKLR	9	75	536.3464898763739	1070.6784268195477	2	536.3458862304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EKITLAKLR_	REV__ENST00000372025.4_1_1:46152902-46153073:+|nuORF	49.44154591367651	0.3095138337212152	2				NaN	NaN	0	NaN	6078	3292	9370
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9373	26.981	NaN	9636	30	0	3015.8	0.106			+	33715	RPGFMNDLFAN	11	65	641.306238515612	1280.597924098024	2	641.3065185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RPGFMNDLFAN_	REV__ENSG00000197977|ENST00000354666|ELOVL2	22.579656572578934	0.7529490144093228	2				NaN	NaN	0	NaN	6079	3292	9370
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9374	26.983	NaN	10309	30	0	3550.1	0.106			+	31752	QPDTVPPEW	9	75	356.837970879265	1067.492083237995	3	356.8380432128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QPDTVPPEW_	REV__ENSG00000131037|ENST00000201647|EPS8L1;REV__ENST00000589362.5_1_19:55593317-55598979:+|nuORF;REV__EPS8L1|p.D510Efs*3|1|0.38|ENSG00000131037|chr19:55086071-55086072|AC/-|frameshift_variant;REV__nc|ENSG00000131037|Q8TE68-2|EPS8L1;REV__nc|ENSG00000131037|Q8TE68-3|EPS8L1;REV__nc|ENSG00000131037|Q8TE68-4|EPS8L1	24.519189625965996	0.574102787014149	2				NaN	NaN	0	NaN	6080	3292	9370
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9375	26.985	NaN	18780	30	0	7515	0.106	+			14969	GTMTGMLYK	9	72	509.2404788526851	1016.4664047721702	2	509.24078369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_GTMTGM(Oxidation (M))LYK_	ENSG00000178440|ENST00000651763|TIMM23B-AGAP6;ENSG00000204152|ENST00000651259|TIMM23B;ENSG00000265354|ENST00000580018|TIMM23;nc|ENSG00000204152|Q5SRD1-2|TIMM23B	107.00750918261382	0.032051501805654005	2				NaN	NaN	0	NaN	6081	3292	9370
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9376	26.986	NaN	3261.8	30	0	497.75	0.034	+			32443	QVINNILE	8	67	471.766209716008	941.517866498816	2	471.76580810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QVINNILE_	ASCC2|p.R715Efs*40|1|0.04|ENSG00000100325|chr22:29789144-29789144|G/-|frameshift_variant;ENSG00000100325|ENST00000307790|ASCC2;ENST00000487486.5_1_22:30188501-30200764:-|nuORF;nc|ENSG00000100325|Q9H1I8-3|ASCC2	45.9519527083369	0.6193794311207887	2				NaN	NaN	0	NaN	6082	3292	9370
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9377	26.987	NaN	6307.2	30	0	964.7	0.14	+			28561	NKELEEKN	8	76	502.2561141984168	1002.4976754636336	2	502.2562561035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NKELEEKN_	ENSG00000110768|ENST00000265963|GTF2H1;ENST00000418116.6_1_11:18344284-18382305:+|nuORF;ENST00000585803.1_1_18:57863810-57864818:+|nuORF	56.72105179125745	0.5342425954139568	2				NaN	NaN	0	NaN	6083	3292	9370
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9388	27.015	NaN	22074	30	0	3085	0.214	+			14330	GSYSLEEPK	9	75	505.24539335865353	1008.4762337841071	2	505.2452392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSYSLEEPK_	ENSG00000115884|ENST00000254351|SDC1;SDC1|p.E283K|1|0.33|ENSG00000115884|chr2:20202852-20202852|C/T|missense_variant	115.49404669440601	0.023927554121326553	2				NaN	NaN	0	NaN	6091	3295	9387
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9389	27.018	NaN	7967.5	30	0	479.39	0.106	+			12793	GELVALKKV	9	78	478.8103782240256	955.6062035148512	2	478.8100891113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GELVALKKV_	CDK12|p.G1271Dfs*23|2|0.26|ENSG00000167258|chr17:39530648-39530648|C/-|frameshift_variant;CDK12|p.P1267Lfs*27|1|0.33|ENSG00000167258|chr17:39530639-39530639|C/-|frameshift_variant;CDK12|p.Q937Kfs*9|1|0.2|ENSG00000167258|chr17:39515766-39515766|T/-|frameshift_variant;ENSG00000167258|ENST00000447079|CDK12;nc|ENSG00000167258|Q9NYV4-2|CDK12;nc|ENSG00000167258|Q9NYV4-3|CDK12	95.81516180277367	0.04847050768394289	2				NaN	NaN	0	NaN	6092	3295	9387
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9390	27.02	NaN	7928	30	0	892.65	0.106			+	-1	GLATVCLMMP	10	75	534.2513973433522	1066.4882417535043	2	534.7537841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Oxidation (M)	_GLATVCLM(Oxidation (M))M(Oxidation (M))P_	REV__ENST00000458005.2_1_17:9738090-9769219:+|nuORF	38.80614096846853	0.5601458937078225	2				NaN	NaN	0	NaN	6093	3295	9387
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9391	27.022	NaN	8894.9	30	0	970.6	0.106			+	8953	EFAPGGEKVQ	10	71	531.2672258282045	1060.5198987232088	2	531.2667236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EFAPGGEKVQ_	REV__ARHGAP21|p.D1617Tfs*32|1|0.1|ENSG00000107863|chr10:24585440-24585440|C/-|frameshift_variant;REV__ARHGAP21|p.I1365Rfs*23|1|0.25|ENSG00000107863|chr10:24591280-24591281|TA/-|frameshift_variant;REV__ARHGAP21|p.K1443*|1|0.33|ENSG00000107863|chr10:24585962-24585963|-/A|frameshift_variant;REV__ARHGAP21|p.Q524Tfs*10|1|0.24|ENSG00000107863|chr10:24620325-24620326|-/T|frameshift_variant;REV__ARHGAP21|p.T482Kfs*8|1|0.08|ENSG00000107863|chr10:24620450-24620451|-/AGGTATT|frameshift_variant;REV__ENSG00000107863|ENST00000396432|ARHGAP21;REV__ENST00000401578.2_1_6:80777785-80779717:-|nuORF;REV__ENST00000476499.1_1_10:24918849-25010828:-|nuORF;REV__nc|ENSG00000107863|Q5T5U3-3|ARHGAP21	58.22992032128504	0.38193887838457763	2				NaN	NaN	0	NaN	6094	3295	9387
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9392	27.024	NaN	6236.1	30	0	614.46	0.106	+			35877	SEEGGHVVL	9	63	463.7325866792461	925.4506204252922	2	463.7323303222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SEEGGHVVL_	ENSG00000053747|ENST00000313654|LAMA3;nc|ENSG00000053747|Q16787-1|LAMA3;nc|ENSG00000053747|Q16787-3|LAMA3;nc|ENSG00000053747|Q16787-4|LAMA3	97.47269410471826	0.04379738608259218	2				NaN	NaN	0	NaN	6095	3295	9387
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9393	27.026	NaN	12379	30	0	1491.8	0.106	+			4970	ATQVAVSVPK	10	80	500.29555161654883	998.5765502998977	2	500.2950134277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATQVAVSVPK_	EIF4G1|p.P1229Qfs*2|1|0.18|ENSG00000114867|chr3:184327606-184327606|C/-|frameshift_variant;ENSG00000114867|ENST00000346169|EIF4G1;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1	110.54063921016906	0.04639402190081153	2				NaN	NaN	0	NaN	6096	3295	9387
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9394	27.028	NaN	3985.3	30	0	570.02	0.032			+	16771	HNGCTGAI	8	65	386.67461592786685	771.3346789225337	2	386.6744384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HNGCTGAI_	REV__ENSG00000163376|ENST00000417314|KBTBD8;REV__nc|ENSG00000163376|Q8NFY9-2|KBTBD8	40.5726180659479	0.6527593143185008	2				NaN	NaN	0	NaN	6097	3295	9387
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9405	27.052	NaN	13906	30	0	1293.7	0.214			+	17267	HYWLGDVEI	9	77	566.2780441040878	1130.5415352749756	2	566.2781982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HYWLGDVEI_	REV__ENSG00000170927|ENST00000371117|PKHD1;REV__nc|ENSG00000170927|P08F94-2|PKHD1;REV__PKHD1|p.H2893Pfs*2|1|0.4|ENSG00000170927|chr6:51754903-51754904|-/G|frameshift_variant	90.36981228632155	0.0638227155548745	2				NaN	NaN	0	NaN	6105	3298	9404
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9406	27.056	NaN	11328	30	0	2960.1	0.106			+	-1	HMSLDLTGNK	10	74	377.85370332651485	1130.5392805797446	3	377.8538818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_HM(Oxidation (M))SLDLTGNK_	REV__MYT1|p.E665K|1|0.31|ENSG00000196132|chr20:64219734-64219734|G/A|missense_variant	40.05817265558897	0.5486090488315611	2				NaN	NaN	0	NaN	6106	3298	9404
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9407	27.058	NaN	12777	30	0	3299.3	0.106	+			36425	SETTKGAYSL	10	82	528.7649123479233	1055.5152717626465	2	528.7645263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SETTKGAYSL_	ENSG00000000938|ENST00000374005|FGR;ENSG00000010810|ENST00000354650|FYN;ENSG00000176105|ENST00000314574|YES1;ENST00000418510.1_1_22:26043331-26044389:+|nuORF;FYN|p.D506Gfs*3|1|0.19|ENSG00000010810|chr6:111661838-111661839|-/T|frameshift_variant;nc|ENSG00000010810|P06241-2|FYN;nc|ENSG00000010810|P06241-3|FYN	66.96192283764107	0.30252237217063654	2				NaN	NaN	0	NaN	6107	3298	9404
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9408	27.059	NaN	7664.7	30	0	730.59	0.106				-1	 	0	74	537.3139946111935	536.3067181445934	1	537.3140869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6108	3298	9404
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9409	27.061	NaN	3813	30	0	657.76	0.106	+			10781	FAGPHSTL	8	60	415.2139874719425	828.413422010685	2	415.2136535644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FAGPHSTL_	ENSG00000106266|ENST00000222990|SNX8;ENST00000480807.1_1_7:2294693-2297236:-|nuORF	74.51659920185547	0.36926395944126233	2				NaN	NaN	0	NaN	6109	3298	9404
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9410	27.063	NaN	5775.3	30	0	411.95	0.106			+	14000	GSDVVFRIG	9	67	475.2586394476341	948.5027259620682	2	475.258544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GSDVVFRIG_	REV__DHX34|p.P760Qfs*12|1|0.35|ENSG00000134815|chr19:47375674-47375674|C/-|frameshift_variant;REV__ENSG00000134815|ENST00000328771|DHX34	37.15910966729921	0.4535818937225704	2				NaN	NaN	0	NaN	6110	3298	9404
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9411	27.065	NaN	7493.5	30	0	1256	0.036	+			8347	EALAANHQQL	10	76	547.7831649805642	1093.5517770279282	2	547.7833862304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EALAANHQQL_	ENSG00000139131|ENST00000324868|YARS2	79.71258880314673	0.19796908725841375	2				NaN	NaN	0	NaN	6111	3298	9404
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9423	27.091	NaN	82777	30	0	27443	0.214			+	-1	SMYLRKMH	8	98	361.1816322228277	1080.5230672686832	3	361.1819152832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_SM(Oxidation (M))YLRKMH_	REV__ENST00000397033.6_1_2:182387000-182387063:+|nuORF	45.9519527083369	0.6193794311207887	2				NaN	NaN	0	NaN	6120	3301	9422
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9424	27.095	NaN	37313	30	0	3290	0.106	+			36575	SFSTVHEKF	9	91	541.2694302229033	1080.5243075126066	2	541.2695922851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SFSTVHEKF_	ENSG00000134987|ENST00000513710|WDR36;ENST00000505303.5_1_5:110428043-110447004:+|nuORF;nc|ENSG00000134987|Q8NI36|WDR36	125.71293069911285	0.017741295328254008	2				NaN	NaN	0	NaN	6121	3301	9422
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9425	27.097	NaN	33170	30	0	14808	0.106	+			8770	EEIAKVEKL	9	99	529.8084376721747	1057.6023224111493	2	529.8085327148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EEIAKVEKL_	ENSG00000170348|ENST00000303575|TMED10;ENST00000555036.1_1_14:75602424-75614456:-|nuORF;ENST00000556969.5_1_14:75601590-75614465:-|nuORF	200.56263349563793	3.093786480258617E-05	2				NaN	NaN	0	NaN	6122	3301	9422
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9426	27.099	NaN	21471	30	0	7309.8	0.106	+			24478	LGGLGKLAAE	10	76	464.77683307396376	927.5391132147275	2	464.7764587402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LGGLGKLAAE_	ENSG00000188100|ENST00000343959|FAM25A;ENSG00000189090|ENST00000452267|FAM25G;ENSG00000276430|ENST00000617224|FAM25C	47.657333605630114	0.47858658696240314	2				NaN	NaN	0	NaN	6123	3301	9422
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9427	27.1	NaN	15438	30	0	2080.1	0.106				-1	SGTILAHCNL	10	82	535.769439307519	1069.5243256818378	2	535.769775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SGTILAHCNL_	AluSc_dup17965|chr9:103205022-103205253:-|1.068588672013086|0.1281315321376564|3.06|481.0|13|2|anti-sense	51.19269402634007	0.44601001148513897	2				NaN	NaN	0	NaN	6124	3301	9422
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9428	27.102	NaN	61720	30	0	16176	0.106			+	8324	EAKIEVGSIL	10	85	353.54105232630695	1057.6013275791208	3	353.5412292480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EAKIEVGSIL_	REV__ENSG00000048707|ENST00000620676|VPS13D;REV__ENST00000460333.5_1_1:12359354-12409038:+|nuORF;REV__ENST00000487188.1_1_1:12371595-12395946:+|nuORF;REV__nc|ENSG00000048707|Q5THJ4-2|VPS13D;REV__VPS13D|p.K3964Nfs*34|1|0.09|ENSG00000048707|chr1:12403831-12403831|A/-|frameshift_variant	16.006774744331256	0.7351120747673535	2				NaN	NaN	0	NaN	6125	3301	9422
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9429	27.104	NaN	13579	30	0	3767.2	0.036	+			21854	KRKLEENGI	9	83	543.8167843330303	1085.6190157328606	2	543.8172607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KRKLEENGI_	ENSG00000100376|ENST00000441876|FAM118A;ENST00000462361.1_1_22:45731157-45736283:+|nuORF;ENST00000483102.5_1_22:45731056-45736283:+|nuORF;FAM118A|p.R346Tfs*7|1|0.31|ENSG00000100376|chr22:45336385-45336386|-/A|frameshift_variant;nc|ENSG00000100376|Q9NWS6-2|FAM118A	51.52775601994872	0.28504342437107444	2				NaN	NaN	0	NaN	6126	3301	9422
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9443	27.133	NaN	21536	30	0	1473.1	0.214	+			18343	IQEPEIALK	9	88	520.8030295348498	1039.5915061364994	2	520.8031616210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IQEPEIALK_	ENSG00000077327|ENST00000376624|SPAG6;nc|ENSG00000077327|O75602-2|SPAG6;nc|ENSG00000077327|O75602-3|SPAG6;nc|ENSG00000077327|O75602-5|SPAG6;SPAG6|p.A403Pfs*2|1|0.33|ENSG00000077327|chr10:22401164-22401164|A/-|frameshift_variant	85.16082228582465	0.07850854922700509	2				NaN	NaN	0	NaN	6137	3304	9442
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9444	27.137	NaN	5958.5	30	0	462.49	0.106	+			18987	IVSTSQVPIP	10	63	347.5373020647569	1039.5900767944706	3	347.53759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IVSTSQVPIP_	ENSG00000169894|ENST00000379458|MUC3A;nc|ENSG00000169894|Q02505-2|MUC3A;nc|ENSG00000169894|Q02505-3|MUC3A;nc|ENSG00000169894|Q02505-4|MUC3A;nc|ENSG00000169894|Q02505-5|MUC3A	30.503639358989545	0.6307262373768582	2				NaN	NaN	0	NaN	6138	3304	9442
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9445	27.139	NaN	10449	30	0	1854.6	0.106				-1	 	0	69	336.5340769935905	1006.5804015809715	3	336.5343017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6139	3304	9442
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9446	27.141	NaN	21123	30	0	1999.6	0.106			+	1418	AEWDETYLK	9	95	577.7701896440311	1153.5258263548621	2	577.770263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEWDETYLK_	REV__ENSG00000183091|ENST00000397345|NEB;REV__nc|ENSG00000183091|P20929-1|NEB;REV__nc|ENSG00000183091|P20929-3|NEB;REV__nc|ENSG00000183091|P20929-4|NEB;REV__NEB|p.K715Nfs*8|1|0.06|ENSG00000183091|chr2:151691930-151691930|T/-|frameshift_variant;REV__NEB|p.L4198Cfs*51|1|0.35|ENSG00000183091|chr2:151568357-151568357|G/-|frameshift_variant;REV__NEB|p.N3442Tfs*4|1|0.2|ENSG00000183091|chr2:151618297-151618297|T/-|frameshift_variant;REV__NEB|p.P541Lfs*16|1|0.49|ENSG00000183091|chr2:151695630-151695630|G/-|frameshift_variant;REV__NEB|p.P928Lfs*29|1|0.38|ENSG00000183091|chr2:151684830-151684830|G/-|frameshift_variant	56.43379154798735	0.2433427591689151	2				NaN	NaN	0	NaN	6140	3304	9442
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9447	27.143	NaN	12588	30	0	1323.1	0.106	+			16886	HPHQNLIATY	10	81	597.3070202332927	1192.5994875333854	2	597.3067016601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HPHQNLIATY_	ENSG00000122692|ENST00000397149|SMU1;nc|ENSG00000122692|Q2TAY7-2|SMU1	136.26810882979174	0.01174908900087339	2				NaN	NaN	0	NaN	6141	3304	9442
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9448	27.145	NaN	7444.3	30	0	1423.1	0.038			+	47214	VMDEKGYSML	10	74	594.7674533237831	1187.5203537143661	2	594.7676391601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_VMDEKGYSM(Oxidation (M))L_	REV__ENSG00000019485|ENST00000683152|PRDM11	40.77816245573522	0.5419747034533848	2				NaN	NaN	0	NaN	6142	3304	9442
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9449	27.145	NaN	4884.6	30	0	944.53	0.147	+			5850	AVIPEKQLVEK	11	70	418.58714439075027	1252.739603772451	3	418.5868835449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AVIPEKQLVEK_	ENSG00000188994|ENST00000369577|ZNF292;nc|ENSG00000188994|O60281-2|ZNF292;ZNF292|p.L2169Efs*9|1|0.45|ENSG00000188994|chr6:87260133-87260134|TT/-|frameshift_variant;ZNF292|p.N2626Kfs*10|1|0.07|ENSG00000188994|chr6:87261506-87261509|ATTC/-|frameshift_variant;ZNF292|p.R2545Gfs*14|1|0.18|ENSG00000188994|chr6:87261256-87261256|A/-|frameshift_variant;ZNF292|p.S2064Lfs*9|1|0.05|ENSG00000188994|chr6:87259817-87259818|-/ATTACTGTGGGTA|frameshift_variant	29.550750289552195	0.6798279264880025	2				NaN	NaN	0	NaN	6143	3304	9442
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9461	27.173	NaN	35954	30	0	3716	0.214	+			15449	GTYVGLTCK	9	91	499.7522937321744	997.4900345311488	2	499.7523193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GTYVGLTC(Carbamidomethyl (C))K_	ENSG00000221926|ENST00000649191|TRIM16;nc|ENSG00000221926|O95361-2|TRIM16;nc|ENSG00000291110|Q309B1|TRIM16L	106.68306549817024	0.032382560583716295	2				NaN	NaN	0	NaN	6152	3307	9460
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9462	27.177	NaN	38342	30	0	17445	0.106	+			32504	QVQDLFNKK	9	97	560.3116079648895	1118.608662996579	2	560.3119506835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QVQDLFNKK_	ENSG00000006704|ENST00000424337|GTF2IRD1;nc|ENSG00000006704|Q9UHL9-3|GTF2IRD1;nc|ENSG00000006704|Q9UHL9|GTF2IRD1	124.08010499294276	0.018729767491916592	2				NaN	NaN	0	NaN	6153	3307	9460
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9463	27.179	NaN	38635	30	0	15082	0.106	+			21190	KLAVNMVPFPH	11	88	626.8476852033378	1251.6808174734756	2	626.8485107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KLAVNMVPFPH_	ENST00000405234.1_1_6:39967351-39967723:+|nuORF	68.78682469695295	0.2458535704425747	2				NaN	NaN	0	NaN	6154	3307	9460
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9464	27.181	NaN	17530	30	0	2887.4	0.106				-1	 	0	91	386.7393973131815	771.464241693163	2	386.7393493652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6155	3307	9460
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9465	27.183	NaN	16671	30	0	2493.3	0.106			+	47432	VPSRVLLGR	9	75	332.8817206749557	995.6233326250672	3	332.8818664550781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VPSRVLLGR_	REV__DISC1|p.D339Tfs*4|1|0.2|ENSG00000162946|chr1:231694771-231694771|G/-|frameshift_variant;REV__DISC1|p.R735Gfs*12|1|0.33|ENSG00000162946|chr1:232008939-232008939|C/-|frameshift_variant;REV__ENSG00000162946|ENST00000439617|DISC1;REV__ENST00000422590.6_1_1:231829618-232144897:+|nuORF;REV__ENST00000468399.2_1_1:231765255-231837778:+|nuORF;REV__nc|ENSG00000162946|Q9NRI5-10|DISC1;REV__nc|ENSG00000162946|Q9NRI5-2|DISC1;REV__nc|ENSG00000162946|Q9NRI5-3|DISC1;REV__nc|ENSG00000162946|Q9NRI5-4|DISC1;REV__nc|ENSG00000162946|Q9NRI5-5|DISC1;REV__nc|ENSG00000162946|Q9NRI5-6|DISC1;REV__nc|ENSG00000162946|Q9NRI5-7|DISC1;REV__nc|ENSG00000162946|Q9NRI5-8|DISC1;REV__nc|ENSG00000162946|Q9NRI5-9|DISC1	34.172542307311794	0.4838870758800184	2				NaN	NaN	0	NaN	6156	3307	9460
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9466	27.184	NaN	11722	30	0	4477.7	0.106	+			32482	QVNDLFSRK	9	74	553.801433853738	1105.588314774276	2	553.8015747070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QVNDLFSRK_	ENSG00000174428|ENST00000472837|GTF2IRD2B;ENSG00000196275|ENST00000451013|GTF2IRD2;ENSG00000263001|ENST00000573035|GTF2I;ENST00000544802.5_1_7:72593260-72619478:+|nuORF;GTF2IRD2|p.F606Sfs*8|1|0.44|ENSG00000196275|chr7:74797697-74797697|G/-|frameshift_variant;nc|ENSG00000196275|Q86UP8-3|GTF2IRD2;nc|ENSG00000263001|P78347-2|GTF2I;nc|ENSG00000263001|P78347-3|GTF2I;nc|ENSG00000263001|P78347-4|GTF2I	85.86182877749512	0.07653218437724067	2				NaN	NaN	0	NaN	6157	3307	9460
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9467	27.186	NaN	6404.7	30	0	620.34	0.036	+			50785	YENENVKGL	9	69	533.2641558907696	NaN	0	533.2642822265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YENENVKGL_	DDX60|p.F1672Lfs*25|1|0.08|ENSG00000137628|chr4:168220678-168220678|A/-|frameshift_variant;DDX60|p.T1194Pfs*8|1|0.22|ENSG00000137628|chr4:168252634-168252634|T/-|frameshift_variant;ENSG00000137628|ENST00000393743|DDX60	51.19269402634007	0.19847346126499396	2				NaN	NaN	0	NaN	6158	3307	9460
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9480	27.214	NaN	35535	30	0	12450	0.214	+			6649	AYVHMVTHF	9	70	374.17937917449217	1119.5163081236765	3	374.17962646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_AYVHM(Oxidation (M))VTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	49.44154591367651	0.3095138337212152	2				NaN	NaN	0	NaN	6168	3310	9479
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9481	27.218	NaN	18277	30	0	2216.8	0.106	+			23443	LADPENRQL	9	73	528.2777838915714	1054.5410148499427	2	528.27783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LADPENRQL_	ENSG00000172164|ENST00000517992|SNTB1;ENST00000519177.5_1_8:121583594-121823792:-|nuORF;nc|ENSG00000172164|Q13884-2|SNTB1	67.49366992349736	0.1516260258713357	2				NaN	NaN	0	NaN	6169	3310	9479
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9482	27.22	NaN	13354	30	0	6835	0.106	+			5493	AVADKVHLMYK	11	78	425.5690249588045	1273.6852454766135	3	425.5686950683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVADKVHLMYK_	ENSG00000121060|ENST00000316881|TRIM25;ENST00000572021.5_1_17:54969063-54989474:-|nuORF	55.08391021199286	0.3673379875553588	2				NaN	NaN	0	NaN	6170	3310	9479
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9483	27.222	NaN	10960	30	0	1150.2	0.106	+			43236	TEVQLQQKV	9	84	536.8044068109074	1071.5942606886147	2	536.8038330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TEVQLQQKV_	ENSG00000173230|ENST00000614479|GOLGB1;GOLGB1|p.D2495Tfs*21|1|0.22|ENSG00000173230|chr3:121691867-121691867|T/-|frameshift_variant;GOLGB1|p.K2450Rfs*27|1|0.37|ENSG00000173230|chr3:121692000-121692000|T/-|frameshift_variant;nc|ENSG00000173230|Q14789-2|GOLGB1;nc|ENSG00000173230|Q14789-3|GOLGB1;nc|ENSG00000173230|Q14789-4|GOLGB1;nc|ENSG00000173230|Q14789|GOLGB1	148.6902309647307	0.00717441509122429	2				NaN	NaN	0	NaN	6171	3310	9479
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9484	27.224	NaN	9649.2	30	0	916.52	0.106	+			24168	LENEQVQKL	9	75	550.8008237436733	1099.5870945541465	2	550.8012084960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LENEQVQKL_	ENSG00000135968|ENST00000309863|GCC2	134.7655990226056	0.012935733000282069	2				NaN	NaN	0	NaN	6172	3310	9479
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9485	27.225	NaN	6745.9	30	0	971.78	0.106	+			3438	ASQLVGIEK	9	67	472.77374044323636	943.5329279532727	2	472.77392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASQLVGIEK_	ENSG00000077152|ENST00000646651|UBE2T	86.18897241530135	0.07560986027002226	2				NaN	NaN	0	NaN	6173	3310	9479
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9486	27.227	NaN	3525	30	0	601.55	0.034			+	11339	FLEIATLR	8	61	481.78696814782853	961.5593833624571	2	481.786865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FLEIATLR_	REV__ENSG00000174607|ENST00000310836|UGT8	51.33545320467046	0.5859736979383976	2				NaN	NaN	0	NaN	6174	3310	9479
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9501	27.259	NaN	27109	30	0	2044.1	0.214			+	49313	VVRHYMPKL	9	90	571.8291406046495	1141.643728276099	2	571.8292236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVRHYMPKL_	REV__ENSG00000137273|ENST00000645481|FOXF2	110.11987700582712	0.028875675806141952	2				NaN	NaN	0	NaN	6186	3313	9500
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9502	27.262	NaN	6785.3	30	0	567.6	0.106	+			40824	SVEERITQVAK	11	85	630.3505992801055	1258.6866456270109	2	630.3513793945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVEERITQVAK_	CHD4|p.L1404Ffs*9|1|0.42|ENSG00000111642|chr12:6582872-6582873|-/A|frameshift_variant;CHD4|p.N1569Ifs*9|1|0.44|ENSG00000111642|chr12:6581364-6581364|T/-|frameshift_variant;CHD5|p.P1887Rfs*14|1|0.5|ENSG00000116254|chr1:6106698-6106698|G/-|frameshift_variant;ENSG00000111642|ENST00000544040|CHD4;ENSG00000116254|ENST00000262450|CHD5;ENSG00000170004|ENST00000330494|CHD3;nc|ENSG00000111642|Q14839-2|CHD4;nc|ENSG00000170004|Q12873-2|CHD3;nc|ENSG00000170004|Q12873-3|CHD3	73.84112541714126	0.20371746787051248	2				NaN	NaN	0	NaN	6187	3313	9500
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9503	27.264	NaN	8402.2	30	0	1378.8	0.106			+	35700	SDKMGLEK	8	65	454.23173855842026	906.4489241836405	2	454.23095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SDKMGLEK_	REV__ENSG00000169495|ENST00000302495|HTRA4	127.46168284122857	0.2238874366747666	2				NaN	NaN	0	NaN	6188	3313	9500
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9504	27.266	NaN	7141.8	30	0	2135.3	0.106	+			10287	ETMRRRGAL	9	88	363.86943636338293	1088.5864796903488	3	363.8695068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ETMRRRGAL_	ENST00000465232.5_1_10:124713958-124742814:+|nuORF	31.529811441608018	0.5085848003137583	2				NaN	NaN	0	NaN	6189	3313	9500
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9505	27.268	NaN	4686.4	30	0	661.92	0.106	+			17048	HQIMDLNL	8	62	492.25245474120413	982.4903565492083	2	492.25201416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HQIMDLNL_	ENSG00000187323|ENST00000442544|DCC	38.80614096846853	0.6637206697844082	2				NaN	NaN	0	NaN	6190	3313	9500
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9506	27.27	NaN	9153.5	30	0	1207.4	0.037			+	28391	NENPSEQSEL	10	82	573.7490321420692	1145.4835113509382	2	573.7503051757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NENPSEQSEL_	REV__ENSG00000080345|ENST00000444746|RIF1;REV__nc|ENSG00000080345|Q5UIP0-2|RIF1	44.377184641726394	0.5088115166961078	2				NaN	NaN	0	NaN	6191	3313	9500
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9507	27.27	NaN	11808	30	0	1942.3	0.141				-1	ENMRDIPTV	9	82	545.7639879207353	1089.5134229082705	2	545.7638549804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_ENM(Oxidation (M))RDIPTV_	ENST00000467525.5_2_1:161493318-161493444:+|nuORF	39.252832667884924	0.4290233611298554	2				NaN	NaN	0	NaN	6192	3313	9500
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9519	27.298	NaN	17907	30	0	3377.8	0.215	+			41009	SVGSLFVKK	9	81	482.7947122223696	963.5748715115392	2	482.79461669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVGSLFVKK_	ENSG00000176273|ENST00000427197|SLC35G1;nc|ENSG00000176273|Q2M3R5-2|SLC35G1;SLC35G1|p.S209Kfs*34|1|0.05|ENSG00000176273|chr10:93901016-93901017|-/AAGCATAG|frameshift_variant;SLC35G1|p.V92Cfs*7|2|0.27|ENSG00000176273|chr10:93898660-93898660|A/-|frameshift_variant	132.757866228626	0.013877640931359021	2				NaN	NaN	0	NaN	6201	3316	9518
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9520	27.302	NaN	36709	30	0	3280.4	0.106	+			48396	VTIFIRGGNK	10	94	552.8299161193756	1103.6452793055512	2	552.8302001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTIFIRGGNK_	ENSG00000150753|ENST00000280326|CCT5;ENST00000423695.6_1_5:10250480-10261980:+|nuORF;nc|ENSG00000150753|P48643-2|CCT5	142.36107225718385	0.01012457621782354	2				NaN	NaN	0	NaN	6202	3316	9518
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9521	27.304	NaN	12464	30	0	2122.3	0.106	+			40563	SVAECQLMK	9	72	533.2575513486554	1064.5005497641107	2	533.2572631835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SVAEC(Carbamidomethyl (C))QLMK_	ENSG00000105221|ENST00000392038|AKT2;ENST00000391844.8_1_19:40739781-40791100:-|nuORF;ENST00000537834.5_1_19:40745726-40771198:-|nuORF;nc|ENSG00000105221|P31751-2|AKT2	139.97047562133406	0.010493916756945389	2				NaN	NaN	0	NaN	6203	3316	9518
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9522	27.306	NaN	12212	30	0	1386.5	0.106	+			20480	KEYGQTMTV	9	78	528.7552478398949	1055.4959427465897	2	528.7554931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEYGQTMTV_	ENSG00000117595|ENST00000367021|IRF6;nc|ENSG00000117595|O14896-2|IRF6	81.52500206392136	0.09095445986635249	2				NaN	NaN	0	NaN	6204	3316	9518
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9523	27.307	NaN	7461.7	30	0	1644.5	0.106	+			6293	AVSTFAMVK	9	66	485.25660832518565	968.4986637171713	2	485.2570495605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_AVSTFAM(Oxidation (M))VK_	ENSG00000172893|ENST00000355527|DHCR7;ENST00000534701.1_1_11:71149825-71152361:-|nuORF	90.36981228632155	0.0638227155548745	2				NaN	NaN	0	NaN	6205	3316	9518
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9524	27.309	NaN	7692.4	30	0	1246	0.106				-1	 	0	71	322.19340991160374	642.3722668900075	2	322.1936340332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6206	3316	9518
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9525	27.311	NaN	8090	30	0	697.47	0.037	+			1911	AIQNPTMINK	10	80	565.3050301352913	1128.5955073373825	2	565.3058471679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AIQNPTMINK_	ENSG00000167182|ENST00000376741|SP2;nc|ENSG00000167182|Q02086-2|SP2	125.68205650279488	0.01930466848182481	2				NaN	NaN	0	NaN	6207	3316	9518
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9540	27.343	NaN	20217	30	0	1491.1	0.214	+			6215	AVQTAAKELLK	11	86	586.3560932710675	1170.697633608935	2	586.35595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVQTAAKELLK_	ENSG00000123992|ENST00000273075|DNPEP;ENST00000430206.5_1_2:220251659-220252065:-|nuORF;ENST00000460963.5_1_2:220250088-220252486:-|nuORF;ENST00000523527.5_1_2:220250965-220252516:-|nuORF;nc|ENSG00000123992|Q9ULA0-2|DNPEP	160.7221532484678	5.2657678129832264E-05	2				NaN	NaN	0	NaN	6219	3319	9539
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9541	27.346	NaN	11629	30	0	1096.7	0.106			+	3521	ASSLKPAPTLQ	11	79	556.8191286950544	1111.6237044569086	2	556.8194580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASSLKPAPTLQ_	REV__ENST00000006053.6_2_16:57417041-57417284:+|nuORF	96.0336014099291	0.0740748020614995	2				NaN	NaN	0	NaN	6220	3319	9539
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9542	27.348	NaN	17086	30	0	2722.1	0.106			+	-1	LSTFMMKQ	8	88	509.2404788526851	1016.4664047721702	2	509.24078369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Oxidation (M)	_LSTFM(Oxidation (M))M(Oxidation (M))KQ_	REV__ENST00000409858.7_1_9:139978422-139978698:+|nuORF	94.00642277110589	0.2653416297186628	2				NaN	NaN	0	NaN	6221	3319	9539
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9543	27.35	NaN	6743.9	30	0	706.8	0.106	+			27644	MPRVQTQQY	9	79	575.7873060171291	NaN	0	575.7876586914062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MPRVQTQQY_	ENSG00000138674|ENST00000395310|SEC31A;nc|ENSG00000138674|O94979-10|SEC31A;nc|ENSG00000138674|O94979-2|SEC31A;nc|ENSG00000138674|O94979-3|SEC31A;nc|ENSG00000138674|O94979-4|SEC31A;nc|ENSG00000138674|O94979-6|SEC31A;nc|ENSG00000138674|O94979-7|SEC31A;nc|ENSG00000138674|O94979-8|SEC31A;nc|ENSG00000138674|O94979-9|SEC31A;SEC31A|p.P1058Qfs*62|1|0.4|ENSG00000138674|chr4:82827487-82827487|G/-|frameshift_variant	72.87924865735499	0.09578366712754152	2				NaN	NaN	0	NaN	6222	3319	9539
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9544	27.352	NaN	9934.3	30	0	1649	0.106	+			6737	CAQIIPFLTQ	10	74	378.5388165883479	1132.5946203652438	3	378.53887939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_CAQIIPFLTQ_	ENSG00000065717|ENST00000262953|TLE2;nc|ENSG00000065717|Q04725-2|TLE2;nc|ENSG00000065717|Q04725-3|TLE2;TLE2|p.L343*|1|0.5|ENSG00000065717|chr19:3009688-3009688|G/-|frameshift_variant;TLE2|p.L609Pfs*20|1|0.76|ENSG00000065717|chr19:3005509-3005510|-/C|frameshift_variant;TLE2|p.Q379Rfs*13|1|0.33|ENSG00000065717|chr19:3009580-3009580|G/-|frameshift_variant;TLE2|p.R538Pfs*59|1|0.19|ENSG00000065717|chr19:3005856-3005857|-/G|frameshift_variant;TLE2|p.S249Afs*43|2|0.16|ENSG00000065717|chr19:3013798-3013798|G/-|frameshift_variant	24.519189625965996	0.6795976720565101	2				NaN	NaN	0	NaN	6223	3319	9539
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9545	27.354	NaN	5214.2	30	0	623.89	0.034	+			16918	HPLQSSTGF	9	67	487.24055599411525	972.4665590550305	2	487.24029541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HPLQSSTGF_	ENSG00000075568|ENST00000186436|TMEM131;TMEM131|p.L1469Tfs*5|1|0.43|ENSG00000075568|chr2:97772340-97772341|-/T|frameshift_variant	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	6224	3319	9539
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9546	27.354	NaN	8662.3	30	0	1047.7	0.141	+			6653	AYVHMVTHF	9	72	560.765681519703	1119.5168101062059	2	560.7662963867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_AYVHM(Oxidation (M))VTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	76.84663266511073	0.11118375776443899	2				NaN	NaN	0	NaN	6225	3319	9539
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9559	27.384	NaN	61586	30	0	12377	0.214	+			37147	SITTVQIQK	9	84	509.30057755577195	1016.5866021783439	2	509.30059814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SITTVQIQK_	ENST00000394091.5_1_3:101177876-101232004:-|nuORF	145.15565482312357	0.00806134135205793	2				NaN	NaN	0	NaN	6235	3322	9558
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9560	27.388	NaN	55261	30	0	6983.4	0.106	+			12466	GEDKTSAQVSL	11	92	567.7855194791241	1133.5564860250481	2	567.7857666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEDKTSAQVSL_	ENSG00000110002|ENST00000456829|VWA5A;nc|ENSG00000110002|O00534-2|VWA5A;nc|ENSG00000110002|O00534-3|VWA5A;nc|ENSG00000110002|O00534-4|VWA5A;VWA5A|p.D273Ifs*24|1|0.19|ENSG00000110002|chr11:124123014-124123014|A/-|frameshift_variant;VWA5A|p.D571Mfs*3|1|0.56|ENSG00000110002|chr11:124137094-124137094|A/-|frameshift_variant;VWA5A|p.G366Afs*38|1|0.21|ENSG00000110002|chr11:124123733-124123733|G/-|frameshift_variant	136.48854661914896	0.0007874190838222282	2				NaN	NaN	0	NaN	6236	3322	9558
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9561	27.39	NaN	22785	30	0	3924.2	0.106	+			16959	HPQAINQQF	9	77	541.7726679542413	1081.5307829752826	2	541.77294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HPQAINQQF_	ENSG00000119042|ENST00000417098|SATB2;ENST00000483346.2_1_2:200213306-200233427:-|nuORF;nc|ENSG00000119042|Q9UPW6-2|SATB2	124.59426212874841	0.018418509520798258	2				NaN	NaN	0	NaN	6237	3322	9558
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9562	27.391	NaN	32685	30	0	7131.2	0.106			+	22912	KVNIENVALIQ	11	86	414.2470393296944	1239.7192885892832	3	414.246826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KVNIENVALIQ_	REV__ENSG00000159788|ENST00000336727|RGS12;REV__ENST00000502947.1_1_4:3317897-3344786:+|nuORF;REV__nc|ENSG00000159788|O14924-4|RGS12;REV__nc|ENSG00000159788|O14924-5|RGS12;REV__RGS12|p.G112Dfs*9|1|0.33|ENSG00000159788|chr4:3316501-3316501|G/-|frameshift_variant;REV__RGS12|p.K1178Nfs*32|1|0.71|ENSG00000159788|chr4:3428672-3428672|A/-|frameshift_variant;REV__RGS12|p.K869Sfs*2|1|0.44|ENSG00000159788|chr4:3417086-3417086|A/-|frameshift_variant;REV__RGS12|p.N1124Hfs*23|1|0.3|ENSG00000159788|chr4:3428126-3428127|AG/-|frameshift_variant;REV__RGS12|p.Q1292Rfs*49|1|0.23|ENSG00000159788|chr4:3430704-3430704|C/-|frameshift_variant;REV__RGS12|p.Q1363Rfs*30|1|0.3|ENSG00000159788|chr4:3430923-3430923|C/-|frameshift_variant	49.46582953369473	0.42842160004107194	2				NaN	NaN	0	NaN	6238	3322	9558
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9563	27.393	NaN	8074.1	30	0	885.05	0.106	+			8834	EELQNVQRV	9	69	557.7964617088098	1113.5783704844196	2	557.7968139648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EELQNVQRV_	ENSG00000166920|ENST00000396650|C15orf48	126.24258497203832	0.01742065577488747	2				NaN	NaN	0	NaN	6239	3322	9558
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9564	27.395	NaN	6192.4	30	0	1674.5	0.106			+	16654	HIDMFLDHAGV	11	66	627.8003400428405	1253.586127152481	2	627.8012084960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HIDMFLDHAGV_	REV__WDPCP|p.R600H|1|0.31|ENSG00000143951|chr2:63313261-63313261|C/T|missense_variant	39.252832667884924	0.5681665794958463	2				NaN	NaN	0	NaN	6240	3322	9558
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9565	27.397	NaN	9631.9	30	0	2645.9	0.036	+			7803	DPIGGHIHSY	10	78	548.2646133097716	1094.514673686343	2	548.2649536132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DPIGGHIHSY_	ENSG00000136286|ENST00000258787|MYO1G;ENST00000480503.5_1_7:45014700-45018578:-|nuORF;ENST00000483585.5_1_7:45011810-45018578:-|nuORF;nc|ENSG00000136286|B0I1T2-2|MYO1G;nc|ENSG00000136286|B0I1T2-3|MYO1G;nc|ENSG00000136286|B0I1T2-4|MYO1G	95.81516180277367	0.09778090853194907	2				NaN	NaN	0	NaN	6241	3322	9558
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9578	27.425	NaN	11779	30	0	3334.1	0.214	+			19326	KAIELGYNPV	10	80	552.3080171625387	1102.6014813918773	2	552.3085327148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAIELGYNPV_	ENSG00000124615|ENST00000340692|MOCS1;nc|ENSG00000124615|Q9NZB8-2|MOCS1;nc|ENSG00000124615|Q9NZB8-3|MOCS1;nc|ENSG00000124615|Q9NZB8-4|MOCS1;nc|ENSG00000124615|Q9NZB8-5|MOCS1;nc|ENSG00000124615|Q9NZB8-6|MOCS1;nc|ENSG00000124615|Q9NZB8-7|MOCS1;nc|ENSG00000124615|Q9NZB8-8|MOCS1	39.252832667884924	0.5560298534376815	2				NaN	NaN	0	NaN	6251	3325	9577
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9579	27.428	NaN	11194	30	0	1545.2	0.106	+			19875	KEEPPQPQL	9	74	533.2825349474807	1064.5505169617613	2	533.2824096679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEEPPQPQL_	ENSG00000101084|ENST00000344795|RAB5IF;ENST00000491113.1_1_20:35234354-35236222:+|nuORF;nc|ENSG00000101084|Q9BUV8-3|RAB5IF;nc|ENSG00000101084|Q9BUV8-4|RAB5IF;nc|ENSG00000101084|Q9BUV8-5|RAB5IF;nc|ENSG00000101084|Q9BUV8|RAB5IF	63.53385203322761	0.18415635464017938	2				NaN	NaN	0	NaN	6252	3325	9577
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9580	27.431	NaN	12320	30	0	1713.1	0.106	+			39296	STASMGGWTK	10	79	513.2394889026518	1024.4644248721036	2	513.2396240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STASMGGWTK_	ENSG00000166348|ENST00000687698|USP54;ENST00000498143.5_1_10:75279553-75335416:-|nuORF;nc|ENSG00000166348|Q70EL1-6|USP54;nc|ENSG00000166348|Q70EL1-7|USP54;USP54|p.R831Tfs*6|1|0.07|ENSG00000166348|chr10:73519973-73519983|CAGGGCAAGTC/-|frameshift_variant	128.60217544463768	0.01518043149187549	2				NaN	NaN	0	NaN	6253	3325	9577
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9581	27.432	NaN	10317	30	0	1686	0.106	+			14874	GTLPAKLLK	9	73	470.81310646557756	939.6116599979551	2	470.81268310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTLPAKLLK_	ENSG00000180011|ENST00000322342|PTGR3;nc|ENSG00000180011|Q8N4Q0-2|PTGR3	62.107414245175825	0.1960472003779324	2				NaN	NaN	0	NaN	6254	3325	9577
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9582	27.434	NaN	10200	30	0	971.18	0.106	+			362	AAQNSRLSL	9	68	480.2670060704603	958.5194592077206	2	480.2669372558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AAQNSRLSL_	ENSG00000008869|ENST00000233099|HEATR5B;nc|ENSG00000008869|Q9P2D3-2|HEATR5B;nc|ENSG00000008869|Q9P2D3-3|HEATR5B	93.5975768576971	0.05472259948179787	2				NaN	NaN	0	NaN	6255	3325	9577
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9583	27.436	NaN	8884.2	30	0	4541.4	0.106	+			9391	EKEKKVGLY	9	70	547.3163516842429	1092.6181504352858	2	547.3164672851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EKEKKVGLY_	ENSG00000132716|ENST00000368074|DCAF8	49.536043120802724	0.308405419312776	2				NaN	NaN	0	NaN	6256	3325	9577
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9584	27.438	NaN	6348.9	30	0	797.67	0.035	+			10544	EYAHLVQAI	9	63	522.2806404975829	1042.5467280619657	2	522.2796020507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EYAHLVQAI_	ENSG00000072506|ENST00000168216|HSD17B10;ENST00000477706.1_1_X:53458354-53459024:-|nuORF;nc|ENSG00000072506|Q99714-2|HSD17B10	42.396135135203025	0.392153681582562	2				NaN	NaN	0	NaN	6257	3325	9577
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9597	27.466	NaN	112650	30	0	10553	0.212				-1	TCHPSRPFTMA	11	109	660.7942476534414	1319.5739423736827	2	660.7944946289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_TC(Carbamidomethyl (C))HPSRPFTM(Oxidation (M))A_	ENSG00000150627|ENST00000508596|WDR17;nc|ENSG00000150627|Q8IZU2|WDR17;WDR17|p.L742Tfs*15|1|0.52|ENSG00000150627|chr4:176150140-176150141|-/A|frameshift_variant	65.46538089061403	0.2746690761028526	2				NaN	NaN	0	NaN	6267	3328	9596
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9598	27.469	NaN	12603	30	0	1291.3	0.106	+			16214	HEDKIRVVL	9	91	554.8274012426689	1107.6402495521377	2	554.8278198242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HEDKIRVVL_	EHD1|p.E248Rfs*50|1|0.19|ENSG00000110047|chr11:64860098-64860098|G/-|frameshift_variant;ENSG00000024422|ENST00000263277|EHD2;ENSG00000110047|ENST00000320631|EHD1;nc|ENSG00000024422|Q9NZN4-2|EHD2	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	6268	3328	9596
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9599	27.471	NaN	6955.1	30	0	474.02	0.106				-1	 	0	75	609.8209001649384	1217.6272473966767	2	609.8204345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6269	3328	9596
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9600	27.473	NaN	6468.5	30	0	846.07	0.106	+			40688	SVATGLNMMKK	11	74	590.3147562483549	1178.6149595635097	2	590.3155517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVATGLNMMKK_	BAIAP2L1|p.F462Lfs*34|1|0.21|ENSG00000006453|chr7:98304232-98304232|A/-|frameshift_variant;BAIAP2L1|p.P436Hfs*60|4|0.39|ENSG00000006453|chr7:98304311-98304311|G/-|frameshift_variant;ENSG00000006453|ENST00000005260|BAIAP2L1;LMTK2-BAIAP2L1|1|fusion	91.26522074875469	0.0935951923676557	2				NaN	NaN	0	NaN	6270	3328	9596
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9601	27.475	NaN	6236.4	30	0	630.46	0.106				-1	MCCCCVLE	8	86	537.6802090464295	1073.3458651596588	2	537.6815185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	3 Carbamidomethyl (C)	_MC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))CVLE_	ENST00000178638.7_1_15:63617545-63617581:-|nuORF	39.021493756699265	0.6623843612266921	2				NaN	NaN	0	NaN	6271	3328	9596
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9602	27.477	NaN	7382.4	30	0	967.8	0.106	+			7572	DIIPEHHQKK	10	74	622.8416109858009	1243.6686690384017	2	622.8419189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DIIPEHHQKK_	ENSG00000182473|ENST00000589210|EXOC7;ENST00000467586.5_1_17:74084367-74085867:-|nuORF;nc|ENSG00000182473|Q9UPT5-2|EXOC7;nc|ENSG00000182473|Q9UPT5-5|EXOC7;nc|ENSG00000182473|Q9UPT5-6|EXOC7;nc|ENSG00000182473|Q9UPT5|EXOC7	58.2462437865262	0.38179041844353556	2				NaN	NaN	0	NaN	6272	3328	9596
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9603	27.478	NaN	6231.4	30	0	689.25	0.036	+			42146	SYQKNPLKL	9	81	545.8169125602764	1089.6192721873526	2	545.81640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SYQKNPLKL_	ENSG00000091127|ENST00000469408|PUS7;nc|ENSG00000091127|Q96PZ0-2|PUS7;PUS7|p.K415Rfs*43|1|0.26|ENSG00000091127|chr7:105470842-105470842|T/-|frameshift_variant;PUS7|p.R442Gfs*16|1|0.53|ENSG00000091127|chr7:105470762-105470762|T/-|frameshift_variant	63.42647028704847	0.1850514934184437	2				NaN	NaN	0	NaN	6273	3328	9596
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9616	27.506	NaN	30683	30	0	5868.2	0.214				-1	 	0	91	362.8814182535626	1085.6224253608877	3	362.881591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6283	3331	9615
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9617	27.51	NaN	28967	30	0	3317.9	0.106	+			49793	VYSHVIQKL	9	80	543.8189358280332	1085.6233187228663	2	543.8192138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYSHVIQKL_	ENSG00000135094|ENST00000257549|SDS;SDS|p.G305Afs*18|1|0.17|ENSG00000135094|chr12:113393014-113393014|C/-|frameshift_variant	162.25246889848123	0.0040893836092247005	2				NaN	NaN	0	NaN	6284	3331	9615
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9618	27.512	NaN	25487	30	0	13233	0.106	+			48685	VTTGGMVLK	9	72	453.2597257394876	904.5048985457752	2	453.2596435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTTGGMVLK_	ENSG00000173369|ENST00000509305|C1QB;nc|ENSG00000173369|P02746|C1QB	107.00750918261382	0.032051501805654005	2				NaN	NaN	0	NaN	6285	3331	9615
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9619	27.514	NaN	7367.1	30	0	1130.8	0.106	+			50405	YAAQAHLKL	9	100	338.8622519465298	1013.5649264397894	3	338.8624572753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YAAQAHLKL_	ENSG00000132780|ENST00000350030|NASP;nc|ENSG00000132780|P49321-2|NASP;nc|ENSG00000132780|P49321-3|NASP;nc|ENSG00000132780|P49321-4|NASP	31.954861631926434	0.5046124803899898	2				NaN	NaN	0	NaN	6286	3331	9615
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9620	27.516	NaN	10114	30	0	1941.3	0.106				-1	 	0	74	336.5340769935905	1006.5804015809715	3	336.5343017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6287	3331	9615
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9621	27.517	NaN	17873	30	0	1195.1	0.106	+			36002	SEICGANHSF	10	91	561.2376293963451	1120.4607058594902	2	561.2379760742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_SEIC(Carbamidomethyl (C))GANHSF_	ENSG00000198712|ENST00000361739|MT-CO2	58.2462437865262	0.38179041844353556	2				NaN	NaN	0	NaN	6288	3331	9615
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9622	27.519	NaN	4740.5	30	0	388.44	0.035	+			50406	YAAQAHLKL	9	68	507.79009594716763	1013.5656389611353	2	507.7903137207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YAAQAHLKL_	ENSG00000132780|ENST00000350030|NASP;nc|ENSG00000132780|P49321-2|NASP;nc|ENSG00000132780|P49321-3|NASP;nc|ENSG00000132780|P49321-4|NASP	55.50420428727701	0.2510918378945873	2				NaN	NaN	0	NaN	6289	3331	9615
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9636	27.549	NaN	42730	30	0	7785.7	0.214	+			46592	VFQEHQTL	8	85	501.25685268188425	1000.4991524305685	2	501.2559509277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VFQEHQTL_	ENSG00000085733|ENST00000301843|CTTN;ENST00000415461.2_1_11:70253665-70266006:+|nuORF;nc|ENSG00000085733|Q14247-2|CTTN;nc|ENSG00000085733|Q14247-3|CTTN	134.81075121484326	0.23895231276701365	2				NaN	NaN	0	NaN	6300	3334	9635
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9637	27.552	NaN	60036	30	0	37147	0.106	+			15666	GVMRVGLVAK	10	90	343.8790615748001	1028.6153553246004	3	343.8793640136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GVMRVGLVAK_	ENSG00000129351|ENST00000588657|ILF3;ENST00000587928.5_1_19:10781281-10792148:+|nuORF;nc|ENSG00000129351|Q12906-2|ILF3;nc|ENSG00000129351|Q12906-3|ILF3;nc|ENSG00000129351|Q12906-4|ILF3;nc|ENSG00000129351|Q12906-5|ILF3;nc|ENSG00000129351|Q12906-6|ILF3;nc|ENSG00000129351|Q12906|ILF3	64.20726635412375	0.3275756395432415	2				NaN	NaN	0	NaN	6301	3334	9635
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9638	27.555	NaN	17675	30	0	1447.6	0.106	+			15667	GVMRVGLVAK	10	85	515.3153654866742	1028.6161780401483	2	515.3154907226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GVMRVGLVAK_	ENSG00000129351|ENST00000588657|ILF3;ENST00000587928.5_1_19:10781281-10792148:+|nuORF;nc|ENSG00000129351|Q12906-2|ILF3;nc|ENSG00000129351|Q12906-3|ILF3;nc|ENSG00000129351|Q12906-4|ILF3;nc|ENSG00000129351|Q12906-5|ILF3;nc|ENSG00000129351|Q12906-6|ILF3;nc|ENSG00000129351|Q12906|ILF3	62.107414245175825	0.3466735403679669	2				NaN	NaN	0	NaN	6302	3334	9635
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9639	27.556	NaN	10664	30	0	1718.7	0.106	+			36498	SEYIHAQVA	9	77	509.25341082269364	1016.4922687121873	2	509.25347900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SEYIHAQVA_	ENSG00000122642|ENST00000242209|FKBP9;ENST00000455909.5_1_7:55750344-55756724:-|nuORF;ENST00000471066.1_1_7:33042511-33044960:+|nuORF;ENST00000475220.1_1_7:33038205-33044960:+|nuORF;nc|ENSG00000122642|O95302-2|FKBP9;nc|ENSG00000122642|O95302-3|FKBP9;nc|ENSG00000291029|Q75LS8|FKBP9P1	40.77816245573522	0.41113185337114944	2				NaN	NaN	0	NaN	6303	3334	9635
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9640	27.558	NaN	6101.8	30	0	907.62	0.106	+			43102	TEQLVAIYH	9	86	358.5255513359606	1072.5548246080818	3	358.5256042480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TEQLVAIYH_	ENST00000542112.5_1_11:62621512-62623345:-|nuORF	33.51558372728122	0.4900267029546261	2				NaN	NaN	0	NaN	6304	3334	9635
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9641	27.56	NaN	6201.3	30	0	591.39	0.034	+			12869	GEQVAVKSL	9	67	465.76617838172905	929.5178038302581	2	465.7662048339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GEQVAVKSL_	ENSG00000162434|ENST00000342505|JAK1;ENST00000481702.1_1_1:65305238-65306936:-|nuORF	84.81729255234993	0.07947707105691067	2				NaN	NaN	0	NaN	6305	3334	9635
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9642	27.561	NaN	8510.3	30	0	1172	0.138	+			27790	MRVGLVAK	8	67	437.27044105622736	872.5263291792547	2	437.27032470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MRVGLVAK_	ENSG00000129351|ENST00000588657|ILF3;ENST00000587928.5_1_19:10781281-10792148:+|nuORF;nc|ENSG00000129351|Q12906-2|ILF3;nc|ENSG00000129351|Q12906-3|ILF3;nc|ENSG00000129351|Q12906-4|ILF3;nc|ENSG00000129351|Q12906-5|ILF3;nc|ENSG00000129351|Q12906-6|ILF3;nc|ENSG00000129351|Q12906|ILF3	94.00642277110589	0.2653416297186628	2				NaN	NaN	0	NaN	6306	3334	9635
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9654	27.588	NaN	17109	30	0	1632.6	0.214	+			41188	SVLDIETRK	9	81	530.8036685341488	1059.5927841350974	2	530.8037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVLDIETRK_	ENSG00000134987|ENST00000513710|WDR36;ENST00000505303.5_1_5:110428043-110447004:+|nuORF;nc|ENSG00000134987|Q8NI36|WDR36	75.04331003522576	0.118981335847003	2				NaN	NaN	0	NaN	6315	3337	9653
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9655	27.591	NaN	10648	30	0	3225.8	0.106	+			16542	HEVMEQQTL	9	71	557.7650900939902	1113.5156272547804	2	557.7642211914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HEVMEQQTL_	ENSG00000104738|ENST00000649973|MCM4;MCM4|p.T629Qfs*18|2|0.31|ENSG00000104738|chr8:47971419-47971419|A/-|frameshift_variant	85.86182877749512	0.07653218437724067	2				NaN	NaN	0	NaN	6316	3337	9653
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9656	27.593	NaN	8489.5	30	0	1737.9	0.106	+			45798	VAHLGSQL	8	63	412.7349541077769	823.4553552823538	2	412.73455810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VAHLGSQL_	ENSG00000070444|ENST00000174618|MNT	99.37495909608758	0.2510236104623939	2				NaN	NaN	0	NaN	6317	3337	9653
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9657	27.595	NaN	13224	30	0	5307.1	0.106	+			6650	AYVHMVTHF	9	73	374.17937917449217	1119.5163081236765	3	374.17950439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_AYVHM(Oxidation (M))VTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	42.396135135203025	0.392153681582562	2				NaN	NaN	0	NaN	6318	3337	9653
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9658	27.597	NaN	9537.3	30	0	4119.2	0.106	+			9086	EGIHLALVEL	10	71	365.2130765023585	1092.6174001072754	3	365.21319580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EGIHLALVEL_	ENSG00000149262|ENST00000534064|INTS4;ENST00000433818.6_1_11:77629258-77692594:-|nuORF;ENST00000587624.5_1_7:64601607-64646883:+|nuORF;nc|ENSG00000149262|Q96HW7-2|INTS4;nc|ENSG00000149262|Q96HW7-3|INTS4	41.42661286455405	0.5359995577334734	2				NaN	NaN	0	NaN	6319	3337	9653
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9659	27.599	NaN	8578.2	30	0	1366.9	0.106	+			1165	AENGKSNFL	9	75	490.24552339056214	978.4764938479243	2	490.2453308105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AENGKSNFL_	B2M|p.V69Sfs*21|1|0.67|ENSG00000166710|chr15:44715554-44715555|-/A|frameshift_variant;B2M|p.V69Wfs*34|1|0.32|ENSG00000166710|chr15:44715555-44715555|A/-|frameshift_variant;B2M|p.Y98Lfs*5|1|0.08|ENSG00000166710|chr15:44715648-44715648|A/-|frameshift_variant;ENSG00000166710|ENST00000648006|B2M;ENST00000559720.5_1_15:45003705-45007919:+|nuORF	97.59673978297657	0.04344766104981724	2				NaN	NaN	0	NaN	6320	3337	9653
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9660	27.601	NaN	5440.8	30	0	955.91	0.034			+	31149	QGGRYECL	8	64	463.2132954743272	924.4120380154544	2	463.2130126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QGGRYECL_	REV__ENST00000440462.5_1_2:85584367-85596871:+|nuORF	73.97473282117947	0.3737790450121076	2				NaN	NaN	0	NaN	6321	3337	9653
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9674	27.63	NaN	23372	30	0	3411.6	0.214	+			6631	AYSVEHNQL	9	84	530.7567775449381	1059.4990021566762	2	530.7567138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AYSVEHNQL_	ENSG00000117523|ENST00000647382|PRRC2C;nc|ENSG00000117523|Q9Y520-2|PRRC2C;nc|ENSG00000117523|Q9Y520-3|PRRC2C;nc|ENSG00000117523|Q9Y520-4|PRRC2C;nc|ENSG00000117523|Q9Y520-5|PRRC2C;nc|ENSG00000117523|Q9Y520-6|PRRC2C;nc|ENSG00000117523|Q9Y520|PRRC2C;PRRC2C|p.K1018Nfs*7|1|0.21|ENSG00000117523|chr1:171540521-171540521|A/-|frameshift_variant;PRRC2C|p.P2791Lfs*5|1|0.1|ENSG00000117523|chr1:171591761-171591761|C/-|frameshift_variant	79.71258880314673	0.09879134589249085	2				NaN	NaN	0	NaN	6332	3340	9673
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9675	27.633	NaN	10449	30	0	1500.2	0.106			+	30170	PSGFGGPF	8	66	383.18181699920376	764.3490810652075	2	383.1817626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PSGFGGPF_	REV__RPA2|p.S23F|1|0.32|ENSG00000117748|chr1:27914112-27914112|G/A|missense_variant	39.021493756699265	0.6623843612266921	2				NaN	NaN	0	NaN	6333	3340	9673
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9676	27.635	NaN	20458	30	0	1727.6	0.106	+			1755	AIALALREK	9	92	492.8136352837345	983.6127176342691	2	492.8133239746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AIALALREK_	ENSG00000039123|ENST00000230640|MTREX	104.0567914643314	0.03506238181059741	2				NaN	NaN	0	NaN	6334	3340	9673
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9677	27.637	NaN	9935.6	30	0	4463.2	0.106	+			26167	LSRATEQL	8	73	459.25511070194966	916.4956684706993	2	459.255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSRATEQL_	ENSG00000271079|ENST00000420911|CTAGE15;ENSG00000271321|ENST00000470691|CTAGE6	60.97194046774394	0.49215940876911696	2				NaN	NaN	0	NaN	6335	3340	9673
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9678	27.639	NaN	9836.2	30	0	4774	0.106	+			41518	SVPSSETVICR	11	73	617.8085042148396	1233.602455496479	2	617.808349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_SVPSSETVIC(Carbamidomethyl (C))R_	ENSG00000155090|ENST00000285407|KLF10;nc|ENSG00000155090|Q13118-2|KLF10	79.48907831485694	0.15663227531959176	2				NaN	NaN	0	NaN	6336	3340	9673
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9679	27.641	NaN	4973.2	30	0	495.85	0.036			+	26896	LWTPRPQGP	9	76	526.2897066018228	1050.5648602704455	2	526.2894287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LWTPRPQGP_	REV__ENST00000382368.7_2_7:5521153-5521363:-|nuORF	31.954861631926434	0.5046124803899898	2				NaN	NaN	0	NaN	6337	3340	9673
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9680	27.641	NaN	6085	30	0	856.06	0.142	+			7658	DKSKHVIYAP	10	70	579.3178468787735	1156.6211408243469	2	579.3172607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DKSKHVIYAP_	nc|ENSG00000086205|Q04609-8|FOLH1;nc|ENSG00000086205|Q04609-9|FOLH1	58.78195531508484	0.37691818691852547	2				NaN	NaN	0	NaN	6338	3340	9673
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9692	27.669	NaN	28940	30	0	3044.6	0.214	+			15329	GTVIVDSTVGK	11	90	538.303525459003	1074.592497984806	2	538.3038330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTVIVDSTVGK_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	134.38175178908594	0.0009546753189824793	2				NaN	NaN	0	NaN	6347	3343	9691
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9693	27.673	NaN	12904	30	0	2576.7	0.106	+			20095	KEKKDILVL	9	82	362.5688894652836	1084.6848389960508	3	362.5691833496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEKKDILVL_	ENSG00000271601|ENST00000604000|LIX1L	36.446750945000026	0.4619375763483977	2				NaN	NaN	0	NaN	6348	3343	9691
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9694	27.675	NaN	7125.1	30	0	893.02	0.106			+	13259	GIRTSFKLS	9	66	504.7952796379827	1007.5760063427654	2	504.79522705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GIRTSFKLS_	REV__nc|ENSG00000089682|Q96IZ5-3|RBM41	68.84614121027924	0.14577793175421136	2				NaN	NaN	0	NaN	6349	3343	9691
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9695	27.677	NaN	6727.1	30	0	2225.8	0.106				-1	 	0	64	546.2798055869293	545.2725291203293	1	546.2813720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6350	3343	9691
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9696	27.679	NaN	9637.4	30	0	946.62	0.106			+	27765	MRGLGGDGPGQ	11	83	522.7489834629547	1043.4834139927093	2	522.7457275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MRGLGGDGPGQ_	REV__ENST00000480908.1_1_3:141457302-141464019:+|nuORF	78.26377905018397	0.16684720679201295	2				NaN	NaN	0	NaN	6351	3343	9691
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9697	27.68	NaN	5434.8	30	0	576.36	0.106	+			32876	RDGSFTVSA	9	58	470.2298510260039	938.4451491188079	2	470.2297668457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RDGSFTVSA_	ENSG00000165487|ENST00000382374|MICU2;ENST00000469058.1_1_13:22176939-22178287:-|nuORF;MICU2|p.R195Kfs*5|1|0.25|ENSG00000165487|chr13:21521258-21521259|-/T|frameshift_variant	36.446750945000026	0.4619375763483977	2				NaN	NaN	0	NaN	6352	3343	9691
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9698	27.682	NaN	5997	30	0	715.07	0.035			+	17849	IFNVVDAVN	9	71	495.7665596960678	989.5185664589357	2	495.7660827636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IFNVVDAVN_	REV__tr|U7SHB6|U7SHB6_FUSNUMgchelatase-likeproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02331PE=3SV=1	49.44154591367651	0.3095138337212152	2				NaN	NaN	0	NaN	6353	3343	9691
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9713	27.713	NaN	24529	30	0	3517.6	0.213	+			43863	TMDKSELVQK	10	87	610.8150970889513	1219.6156412447026	2	610.8135375976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))TMDKSELVQK_	ENSG00000166913|ENST00000353703|YWHAB	152.06079943815163	0.008129625933261015	2				NaN	NaN	0	NaN	6365	3346	9712
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9714	27.717	NaN	28804	30	0	8961.1	0.106	+			44152	TQLLIINKT	9	106	348.553241881348	1042.637896244244	3	348.55340576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TQLLIINKT_	ABCA8|p.L1128*|1|0.37|ENSG00000141338|chr17:68885242-68885242|A/-|frameshift_variant;ENSG00000141338|ENST00000586539|ABCA8;ENST00000541225.5_1_17:66883094-66937097:-|nuORF;ENST00000590359.1_1_17:66890978-66899548:-|nuORF;nc|ENSG00000141338|O94911-1|ABCA8	74.1650062923329	0.12277912660386392	2				NaN	NaN	0	NaN	6366	3346	9712
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9715	27.719	NaN	25678	30	0	7515	0.106	+			17199	HVASQPVM	8	67	434.72072052758875	867.4268881219775	2	434.7206115722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HVASQPVM_	ENSG00000214013|ENST00000318010|GANC	60.29395666154354	0.49887135096048313	2				NaN	NaN	0	NaN	6367	3346	9712
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9716	27.721	NaN	16348	30	0	3347	0.106	+			19850	KEEIIKTL	8	78	487.29998567566645	972.5854184181329	2	487.2996826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEEIIKTL_	ENSG00000108298|ENST00000225430|RPL19;ENST00000423330.1_1_9:133527641-133527767:+|nuORF;ENST00000424919.1_1_X:150162237-150162561:+|nuORF;ENST00000432746.1_1_7:102781798-102782185:-|nuORF;ENST00000433839.1_1_10:122892628-122892781:-|nuORF;ENST00000498753.1_1_3:141762467-141763034:-|nuORF;ENST00000577759.1_1_17:37360679-37360898:+|nuORF	107.00750918261382	0.24681273948614665	2				NaN	NaN	0	NaN	6368	3346	9712
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9717	27.722	NaN	18688	30	0	2009	0.106	+			43053	TELIQKAKL	9	84	522.3267846026457	1042.6390162720913	2	522.3265380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TELIQKAKL_	ENSG00000134308|ENST00000238081|YWHAQ	106.88024417677582	0.032181361622142884	2				NaN	NaN	0	NaN	6369	3346	9712
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9718	27.724	NaN	9274.5	30	0	564.34	0.035	+			3560	ASTLVILRK	9	85	500.82908781260477	999.6436226920096	2	500.82891845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASTLVILRK_	ENSG00000176273|ENST00000427197|SLC35G1;nc|ENSG00000176273|Q2M3R5-2|SLC35G1	74.1650062923329	0.12277912660386392	2				NaN	NaN	0	NaN	6370	3346	9712
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9719	27.725	NaN	19366	30	0	2103	0.14	+			1793	AIFKPVMSK	9	92	510.7990465106208	1019.5835400880417	2	510.7991638183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AIFKPVMSK_	ENSG00000116478|ENST00000373548|HDAC1	128.60217544463768	0.015992218256422188	2				NaN	NaN	0	NaN	6371	3346	9712
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9733	27.756	NaN	34321	30	0	17652	0.214	+			1794	AIFKPVMSK	9	88	340.86828670315424	1019.5830307096628	3	340.8684387207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AIFKPVMSK_	ENSG00000116478|ENST00000373548|HDAC1	38.753607047826485	0.4348790777924195	2				NaN	NaN	0	NaN	6382	3349	9732
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9734	27.759	NaN	18812	30	0	3650.6	0.106	+			15817	GVYGSFASK	9	81	458.23224669372166	914.4499404542433	2	458.2319030761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GVYGSFASK_	ENSG00000155096|ENST00000337198|AZIN1	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	6383	3349	9732
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9735	27.761	NaN	8554.5	30	0	1317.1	0.106	+			46295	VEKAAAVSL	9	68	444.26336362000666	886.5121743068133	2	444.26318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VEKAAAVSL_	ENSG00000157827|ENST00000288670|FMNL2;ENSG00000161791|ENST00000335154|FMNL3;ENST00000549137.1_1_12:50039600-50046016:-|nuORF;nc|ENSG00000157827|Q96PY5|FMNL2;nc|ENSG00000161791|Q8IVF7-2|FMNL3;nc|ENSG00000161791|Q8IVF7|FMNL3	96.0336014099291	0.047854655524928534	2				NaN	NaN	0	NaN	6384	3349	9732
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9736	27.763	NaN	23374	30	0	3528.2	0.106	+			9870	EQGPLTLQTL	10	90	550.3034621529065	1098.592371372613	2	550.3037719726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EQGPLTLQTL_	ENSG00000187105|ENST00000553558|HEATR4	107.00750918261382	0.05688644658934505	2				NaN	NaN	0	NaN	6385	3349	9732
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9737	27.765	NaN	4408.1	30	0	1409.6	0.106			+	11293	FKLMGLGA	8	58	418.73860830486433	835.4626636765287	2	418.7384033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FKLMGLGA_	REV__DNAH10|p.D3416Mfs*54|1|0.28|ENSG00000197653|chr12:123914871-123914871|C/-|frameshift_variant;REV__DNAH10|p.N3499Ifs*2|1|0.14|ENSG00000197653|chr12:123916578-123916578|A/-|frameshift_variant;REV__ENSG00000197653|ENST00000673944|DNAH10;REV__nc|ENSG00000197653|Q8IVF4|DNAH10	29.841539824830324	0.7289191502596711	2				NaN	NaN	0	NaN	6386	3349	9732
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9738	27.767	NaN	9947.5	30	0	1085.1	0.034			+	-1	ATMVASLLE	9	78	475.7475422826594	949.4805316321189	2	475.7502136230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_ATM(Oxidation (M))VASLLE_	REV__ACAA1|p.L369Wfs*7|1|0.31|ENSG00000060971|chr3:38125659-38125659|G/-|frameshift_variant;REV__ENSG00000060971|ENST00000333167|ACAA1;REV__ENST00000484284.5_1_3:38175441-38178607:-|nuORF;REV__ENST00000489559.1_1_3:38175990-38178538:-|nuORF;REV__nc|ENSG00000060971|P09110-2|ACAA1	42.396135135203025	0.392153681582562	2				NaN	NaN	0	NaN	6387	3349	9732
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9739	27.767	NaN	5276.4	30	0	586.12	0.14			+	9402	EKGAGYVVAY	10	63	528.7718782298833	1055.5292035265666	2	528.7718505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EKGAGYVVAY_	REV__ENSG00000130997|ENST00000511885|POLN;REV__ENST00000514858.5_1_4:2082849-2194957:-|nuORF	45.97224482568171	0.49411383603842696	2				NaN	NaN	0	NaN	6388	3349	9732
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9753	27.799	NaN	30572	30	0	6699.6	0.214	+			3635	ASWGGTIEK	9	86	474.7430723507113	947.4715917682227	2	474.7427978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASWGGTIEK_	ENSG00000144426|ENST00000683969|NBEAL1;NBEAL1|p.A1274Qfs*17|1|0.1|ENSG00000144426|chr2:203135766-203135766|A/-|frameshift_variant;NBEAL1|p.F1670Lfs*25|1|0.21|ENSG00000144426|chr2:203144843-203144843|T/-|frameshift_variant;NBEAL1|p.F2315Lfs*2|1|0.17|ENSG00000144426|chr2:203193900-203193900|T/-|frameshift_variant;NBEAL1|p.K2562Rfs*15|1|0.41|ENSG00000144426|chr2:203209306-203209306|A/-|frameshift_variant;NBEAL1|p.N2072Kfs*10|1|0.35|ENSG00000144426|chr2:203172825-203172826|-/A|frameshift_variant;NBEAL1|p.T1311Nfs*3|1|0.08|ENSG00000144426|chr2:203135875-203135876|-/A|frameshift_variant;nc|ENSG00000144426|Q6ZS30-1|NBEAL1;nc|ENSG00000144426|Q6ZS30|NBEAL1	112.10723106719422	0.02684780151337622	2				NaN	NaN	0	NaN	6399	3352	9752
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9754	27.802	NaN	11374	30	0	3503.2	0.106	+			49872	VYTDCSNKL	9	84	521.7477040788901	1041.4808552245802	2	521.7476806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYTDCSNKL_	ENSG00000183530|ENST00000327423|PRR14L;nc|ENSG00000183530|Q5THK1-2|PRR14L;nc|ENSG00000183530|Q5THK1-3|PRR14L;nc|ENSG00000183530|Q5THK1-4|PRR14L;PRR14L|p.L1550*|1|0.31|ENSG00000183530|chr22:31713190-31713190|A/-|frameshift_variant	51.19269402634007	0.2889735674168909	2				NaN	NaN	0	NaN	6400	3352	9752
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9755	27.804	NaN	15172	30	0	2010.6	0.106	+			24314	LFHPSNVEM	9	89	545.2552599503026	1088.4959669674051	2	545.255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_LFHPSNVEM(Oxidation (M))_	ENSG00000151694|ENST00000310823|ADAM17	124.08010499294276	0.018729767491916592	2				NaN	NaN	0	NaN	6401	3352	9752
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9756	27.806	NaN	9181.7	30	0	1055.6	0.106			+	2831	ASAGGHNIIP	10	69	468.74830477739977	935.4820566215996	2	468.748291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASAGGHNIIP_	REV__AHCTF1|p.E1870Kfs*19|1|0.27|ENSG00000153207|chr1:246850426-246850426|T/-|frameshift_variant;REV__AHCTF1|p.G1113Wfs*13|1|0.07|ENSG00000153207|chr1:246867281-246867282|-/A|frameshift_variant;REV__ENSG00000153207|ENST00000648844|AHCTF1;REV__nc|ENSG00000153207|Q8WYP5-2|AHCTF1;REV__nc|ENSG00000153207|Q8WYP5-3|AHCTF1	64.20726635412375	0.3275756395432415	2				NaN	NaN	0	NaN	6402	3352	9752
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9757	27.808	NaN	12362	30	0	1607	0.106			+	33011	REGNKGPAGDN	11	75	557.7650900939902	1113.5156272547804	2	558.274169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_REGNKGPAGDN_	REV__COL3A1|p.G786Dfs*5|1|0.33|ENSG00000168542|chr2:189001549-189001549|C/-|frameshift_variant;REV__COL3A1|p.N1405Sfs*4|1|0.06|ENSG00000168542|chr2:189010849-189010850|-/GTTCAGG|frameshift_variant;REV__CON__P04258;REV__ENSG00000168542|ENST00000304636|COL3A1;REV__nc|ENSG00000168542|P02461-2|COL3A1	51.52775601994872	0.4002081502334604	2				NaN	NaN	0	NaN	6403	3352	9752
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9758	27.81	NaN	8394.1	30	0	1352.6	0.037	+			4480	ATITDKELLK	10	75	566.3350490577427	1130.6555451822853	2	566.3353271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATITDKELLK_	ENSG00000131503|ENST00000360839|ANKHD1;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	59.26467630326872	0.3725278979457616	2				NaN	NaN	0	NaN	6404	3352	9752
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9759	27.81	NaN	8289.1	30	0	706.39	0.14			+	26855	LVVTDGAALA	10	73	465.2691363463593	928.5237197595186	2	465.268798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LVVTDGAALA_	REV__tr|U7SHE9|U7SHE9_FUSNUAldehydedehydrogenasedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02287PE=3SV=1	44.116797842482775	0.5112108506279902	2				NaN	NaN	0	NaN	6405	3352	9752
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9771	27.838	NaN	270080	30	0	35755	0.151	+			23315	KYQEVTNNL	9	94	554.7849686644379	1107.5553843956757	2	554.7850952148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KYQEVTNNL_	ENSG00000135387|ENST00000341394|CAPRIN1;nc|ENSG00000135387|Q14444-2|CAPRIN1	195.04605151776784	5.427472092243166E-05	2				NaN	NaN	0	NaN	6414	3355	9770
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9772	27.84	NaN	27033	30	0	2799.6	0.106	+			32915	RDVKALTL	8	85	458.28477062868876	914.5549883241775	2	458.28436279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RDVKALTL_	ENSG00000133872|ENST00000256255|SARAF;ENST00000517569.1_1_8:29931365-29940465:-|nuORF	61.691277971877994	0.48503807091462214	2				NaN	NaN	0	NaN	6415	3355	9770
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9773	27.842	NaN	13492	30	0	1699.1	0.106				-1	CGECHHTCGA	10	93	537.6802090464295	1073.3458651596588	2	537.6810302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_C(Carbamidomethyl (C))GECHHTCGA_	PCSK6|p.T854A|1|0.62|ENSG00000140479|chr15:101318328-101318328|T/C|missense_variant	23.04248740728303	0.69165701907106	2				NaN	NaN	0	NaN	6416	3355	9770
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9774	27.844	NaN	12557	30	0	1284.3	0.106			+	19872	KEENHIIK	8	78	505.7853448712122	1009.5561368092244	2	505.7850036621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEENHIIK_	REV__ENST00000534277.5_1_16:31724760-31767037:+|nuORF	56.72105179125745	0.5342425954139568	2				NaN	NaN	0	NaN	6417	3355	9770
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9775	27.846	NaN	16217	30	0	1737.1	0.106	+			6191	AVQQPFINK	9	85	522.7950767758019	1043.5756006184038	2	522.7955932617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVQQPFINK_	ENSG00000186260|ENST00000571589|MRTFB;nc|ENSG00000186260|Q9ULH7-4|MRTFB;nc|ENSG00000186260|Q9ULH7|MRTFB	87.75429964447693	0.0711966946989736	2				NaN	NaN	0	NaN	6418	3355	9770
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9776	27.848	NaN	13251	30	0	2049.2	0.106	+			2272	ALYGGRILK	9	75	495.80846550977515	989.6023780863503	2	495.80804443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ALYGGRILK_	ENST00000318524.6_1_9:33294912-33295365:+|nuORF	71.29570347882199	0.13518600952103718	2				NaN	NaN	0	NaN	6419	3355	9770
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9777	27.85	NaN	9725.7	30	0	1090.1	0.038	+			33090	RELAQQVQQV	10	73	599.8307040727474	1197.6468552122947	2	599.8306884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RELAQQVQQV_	DDX5|p.D424Ifs*31|1|0.03|ENSG00000108654|chr17:64500720-64500721|-/AAGCAATTAAT|frameshift_variant;DDX5|p.D572Nfs*6|1|0.04|ENSG00000108654|chr17:64500054-64500055|-/TGACAAGATAGTT|frameshift_variant;DDX5|p.R502Gfs*87|1|0.21|ENSG00000108654|chr17:64500264-64500264|T/-|frameshift_variant;ENSG00000100201|ENST00000403230|DDX17;ENSG00000108654|ENST00000225792|DDX5;ENST00000216019.11_1_22:38888049-38902242:-|nuORF;ENST00000432525.5_1_22:38886367-38903636:-|nuORF;ENST00000581230.5_1_17:62498125-62502378:-|nuORF;ENST00000583894.1_1_17:62499542-62500133:-|nuORF;nc|ENSG00000100201|Q92841-1|DDX17;nc|ENSG00000100201|Q92841-2|DDX17;nc|ENSG00000100201|Q92841-3|DDX17;nc|ENSG00000108654|P17844-2|DDX5	93.5975768576971	0.11047702954938905	2				NaN	NaN	0	NaN	6420	3355	9770
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9778	27.85	NaN	10410	30	0	4174.8	0.141			+	-1	EEAMCPEKS	9	64	540.7198236356971	1079.4250943381942	2	540.7197875976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Carbamidomethyl (C)	_EEAMC(Carbamidomethyl (C))PEKS_	REV__CATSPERG|p.P884Qfs*18|1|0.48|ENSG00000099338|chr19:38367188-38367188|C/-|frameshift_variant;REV__ENSG00000099338|ENST00000409235|CATSPERG	29.14955571784316	0.5308295550522326	2				NaN	NaN	0	NaN	6421	3355	9770
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9796	27.889	NaN	69808	30	0	11643	0.214			+	-1	GRAATMTD	8	78	440.6953775607208	879.3762021882416	2	440.6954040527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))GRAATM(Oxidation (M))TD_	REV__ENST00000380752.9_1_13:30087970-30088375:-|nuORF	68.78682469695295	0.41700713582915416	2				NaN	NaN	0	NaN	6436	3358	9795
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9797	27.892	NaN	76734	30	0	30574	0.106	+			15240	GTTAVFINK	9	86	475.7687247952009	949.5228966572018	2	475.7688903808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTTAVFINK_	ASH1L|p.H1793Ifs*7|1|0.13|ENSG00000116539|chr1:155438778-155438778|G/-|frameshift_variant;ASH1L|p.I970Lfs*9|1|0.2|ENSG00000116539|chr1:155479962-155479962|T/-|frameshift_variant;ASH1L|p.K1222Rfs*11|4|0.27|ENSG00000116539|chr1:155479205-155479205|T/-|frameshift_variant;ASH1L|p.K1533Sfs*17|1|0.25|ENSG00000116539|chr1:155478272-155478272|T/-|frameshift_variant;ASH1L|p.K2377Nfs*5|1|0.28|ENSG00000116539|chr1:155354570-155354570|T/-|frameshift_variant;ASH1L|p.N1822Tfs*2|1|0.33|ENSG00000116539|chr1:155438690-155438690|T/-|frameshift_variant;ASH1L|p.R712Efs*23|3|0.35|ENSG00000116539|chr1:155480736-155480736|T/-|frameshift_variant;ASH1L|p.S2309Ifs*11|1|0.64|ENSG00000116539|chr1:155357635-155357636|-/T|frameshift_variant;ENSG00000116539|ENST00000392403|ASH1L;nc|ENSG00000116539|Q9NR48|ASH1L	115.49404669440601	0.023927554121326553	2				NaN	NaN	0	NaN	6437	3358	9795
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9798	27.894	NaN	9736.1	30	0	1022.3	0.106	+			2406	APAPIHNQF	9	79	497.7593119421652	993.5040709511304	2	497.75927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_APAPIHNQF_	ENSG00000051108|ENST00000439977|HERPUD1;ENST00000570273.5_1_16:56966069-56976120:+|nuORF;HERPUD1|p.S286Pfs*2|1|0.44|ENSG00000051108|chr16:56940194-56940194|C/-|frameshift_variant;nc|ENSG00000051108|Q15011-2|HERPUD1;nc|ENSG00000051108|Q15011-4|HERPUD1	115.45897859103373	0.02394878348088707	2				NaN	NaN	0	NaN	6438	3358	9795
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9799	27.896	NaN	7469.7	30	0	2214.7	0.106			+	23812	LCQLGRCPE	9	65	566.7649385163718	1131.5153240995435	2	566.7651977539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_LC(Carbamidomethyl (C))QLGRC(Carbamidomethyl (C))PE_	REV__ENSG00000187122|ENST00000266058|SLIT1;REV__SLIT1|p.D1462Tfs*42|1|0.21|ENSG00000187122|chr10:97001333-97001333|C/-|frameshift_variant	44.116797842482775	0.37197099687881774	2				NaN	NaN	0	NaN	6439	3358	9795
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9800	27.898	NaN	7247.8	30	0	728.11	0.106	+			76	AAAYPHTSL	9	64	465.73761254672837	929.4606721602568	2	465.7373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AAAYPHTSL_	ENSG00000142599|ENST00000400908|RERE;nc|ENSG00000142599|Q9P2R6-2|RERE;RERE|p.Q899L|1|0.36|ENSG00000142599|chr1:8360811-8360811|T/A|missense_variant;RERE|p.S1084Rfs*173|1|0.21|ENSG00000142599|chr1:8360258-8360258|C/-|frameshift_variant;RERE|p.T1358Dfs*37|1|0.36|ENSG00000142599|chr1:8358464-8358465|-/G|frameshift_variant	57.81127852772723	0.2318599694398087	2				NaN	NaN	0	NaN	6440	3358	9795
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9801	27.9	NaN	6657	30	0	619.1	0.035	+			25643	LQSSRVGSF	9	73	490.7616429374594	979.5087329417188	2	490.76171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LQSSRVGSF_	ENSG00000107036|ENST00000414202|RIC1;ENST00000276898.3_1_9:5713908-5748617:+|nuORF;nc|ENSG00000107036|Q4ADV7-2|RIC1;nc|ENSG00000107036|Q4ADV7-3|RIC1;RIC1|p.M978Ifs*8|1|0.04|ENSG00000107036|chr9:5765505-5765506|-/TTGGGAA|frameshift_variant;RIC1|p.M978Nfs*6|1|0.04|ENSG00000107036|chr9:5765503-5765504|-/A|frameshift_variant	62.107414245175825	0.1960472003779324	2				NaN	NaN	0	NaN	6441	3358	9795
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9802	27.9	NaN	8314.8	30	0	1541.4	0.143				-1	 	0	70	336.5340769935905	1006.5804015809715	3	336.5342712402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6442	3358	9795
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9815	27.93	NaN	33468	30	0	12311	0.214	+			16543	HEVMEQQTL	9	77	557.7635128398858	1113.5124727465716	2	557.7639770507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HEVMEQQTL_	ENSG00000104738|ENST00000649973|MCM4;MCM4|p.T629Qfs*18|2|0.31|ENSG00000104738|chr8:47971419-47971419|A/-|frameshift_variant	141.52041321563706	0.009766778904176347	2				NaN	NaN	0	NaN	6452	3361	9814
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9816	27.934	NaN	16423	30	0	3126	0.106	+			47092	VLKVLSSLK	9	75	493.83410757975145	985.6536622263029	2	493.8338623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VLKVLSSLK_	DIDO1|p.G1745Afs*119|1|0.26|ENSG00000101191|chr20:62880722-62880722|C/-|frameshift_variant;DIDO1|p.P1738Hfs*126|1|0.39|ENSG00000101191|chr20:62880743-62880743|G/-|frameshift_variant;DIDO1|p.S1285Afs*76|1|0.39|ENSG00000101191|chr20:62882104-62882104|G/-|frameshift_variant;ENSG00000101191|ENST00000395343|DIDO1	67.49366992349736	0.1516260258713357	2				NaN	NaN	0	NaN	6453	3361	9814
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9817	27.936	NaN	46310	30	0	8391.7	0.106	+			48195	VTAKELSLVNK	11	100	601.3612919068516	1200.7080308805032	2	601.3612060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTAKELSLVNK_	ENSG00000050405|ENST00000341247|LIMA1;LIMA1|p.T536Lfs*38|2|0.4|ENSG00000050405|chr12:50177739-50177739|G/-|frameshift_variant;nc|ENSG00000050405|Q9UHB6-4|LIMA1	179.60300308260588	8.444055581093084E-06	2				NaN	NaN	0	NaN	6454	3361	9814
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9818	27.937	NaN	14613	30	0	4841.8	0.106	+			38915	SSPQPGSAL	9	59	422.2141980922002	842.4138432512004	2	422.21380615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSPQPGSAL_	ARID1A|p.A1077Gfs*28|1|0.28|ENSG00000117713|chr1:26771148-26771149|-/G|frameshift_variant;ARID1A|p.F2141Sfs*59|5|0.26|ENSG00000117713|chr1:26780313-26780313|C/-|frameshift_variant;ARID1A|p.K1072Nfs*21|3|0.25|ENSG00000117713|chr1:26771131-26771131|A/-|frameshift_variant;ARID1A|p.K1161Sfs*19|1|0.29|ENSG00000117713|chr1:26772573-26772573|A/-|frameshift_variant;ARID1A|p.M1564Hfs*8|1|0.18|ENSG00000117713|chr1:26774910-26774911|-/C|frameshift_variant;ARID1A|p.N1475Tfs*6|1|0.36|ENSG00000117713|chr1:26774648-26774648|A/-|frameshift_variant;ARID1A|p.P1115Qfs*46|1|0.32|ENSG00000117713|chr1:26771260-26771260|C/-|frameshift_variant;ARID1A|p.P1326Rfs*155|1|0.15|ENSG00000117713|chr1:26773685-26773685|C/-|frameshift_variant;ARID1A|p.P1406Rfs*37|1|0.42|ENSG00000117713|chr1:26774444-26774448|CCCCA/-|frameshift_variant;ARID1A|p.P1568Lfs*44|1|0.14|ENSG00000117713|chr1:26774926-26774926|C/-|frameshift_variant;ARID1A|p.P1575Hfs*37|1|0.38|ENSG00000117713|chr1:26774947-26774947|C/-|frameshift_variant;ARID1A|p.P2114Rfs*21|1|0.46|ENSG00000117713|chr1:26780236-26780236|C/-|frameshift_variant;ARID1A|p.V2244Gfs*34|1|0.31|ENSG00000117713|chr1:26780626-26780627|-/G|frameshift_variant;ENSG00000117713|ENST00000324856|ARID1A;nc|ENSG00000117713|O14497-2|ARID1A;nc|ENSG00000117713|O14497-3|ARID1A	80.45461616416974	0.09558281504443908	2				NaN	NaN	0	NaN	6455	3361	9814
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9819	27.939	NaN	10941	30	0	1656	0.106	+			12824	GENDRGVSF	9	85	490.7251108661536	979.4356687991072	2	490.72491455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GENDRGVSF_	ENSG00000172531|ENST00000376745|PPP1CA;ENSG00000186298|ENST00000335007|PPP1CC;ENSG00000213639|ENST00000395366|PPP1CB;ENST00000462832.5_1_2:29006774-29038903:+|nuORF;ENST00000526510.5_1_11:67166008-67168740:-|nuORF;ENST00000532279.1_1_11:67166350-67167062:-|nuORF;ENST00000532446.5_1_11:67166008-67168991:-|nuORF;nc|ENSG00000172531|P62136-2|PPP1CA;nc|ENSG00000172531|P62136-3|PPP1CA;nc|ENSG00000186298|P36873-2|PPP1CC	58.2462437865262	0.22823408064396822	2				NaN	NaN	0	NaN	6456	3361	9814
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9820	27.941	NaN	11832	30	0	4038.1	0.106				-1	AYVHMVTHF	9	71	374.17937917449217	1119.5163081236765	3	374.17962646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_AYVHM(Oxidation (M))VTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	35.61828744233558	0.47037581924408073	2				NaN	NaN	0	NaN	6457	3361	9814
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9821	27.943	NaN	9705.4	30	0	798.27	0.037	+			877	AEHFLEQQM	9	76	574.7557525952458	1147.4969522572915	2	574.7557373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_AEHFLEQQM(Oxidation (M))_	CCT3|p.A379Lfs*9|1|0.21|ENSG00000163468|chr1:156312061-156312061|C/-|frameshift_variant;CCT3|p.K197Nfs*23|1|0.17|ENSG00000163468|chr1:156320857-156320857|T/-|frameshift_variant;CCT3|p.L350Ffs*9|1|0.49|ENSG00000163468|chr1:156312146-156312147|-/A|frameshift_variant;ENSG00000163468|ENST00000295688|CCT3;nc|ENSG00000163468|P49368-2|CCT3	90.60085204095205	0.06317133949006545	2				NaN	NaN	0	NaN	6458	3361	9814
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9834	27.971	NaN	63822	30	0	17720	0.214				-1	 	0	75	343.1987245710591	684.3828962089182	2	343.1988220214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6468	3364	9833
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9835	27.974	NaN	18983	30	0	4942.1	0.106	+			16844	HPEKLATVL	9	75	504.2977651788486	NaN	0	504.29766845703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HPEKLATVL_	ENSG00000164934|ENST00000612750|DCAF13;ENST00000521716.1_1_8:104427674-104432721:+|nuORF;nc|ENSG00000164934|Q9NV06-2|DCAF13	75.04331003522576	0.0883683072398826	2				NaN	NaN	0	NaN	6469	3364	9833
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9836	27.977	NaN	9024.5	30	0	1477.3	0.106	+			20764	KHKKPLSA	8	66	454.78748862549816	907.5604243177963	2	454.7869873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KHKKPLSA_	nc|ENSG00000095637|Q9BX66-12|SORBS1	42.47446043378293	0.6409579893742323	2				NaN	NaN	0	NaN	6470	3364	9833
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9837	27.978	NaN	8655.1	30	0	1241.3	0.106	+			14604	GTGASGSFKLN	11	80	519.7647926393557	1037.5150323455114	2	519.7645874023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTGASGSFKLN_	ENSG00000124575|ENST00000244534|H1-3;ENSG00000124610|ENST00000244573|H1-1;ENSG00000168298|ENST00000304218|H1-4;ENSG00000184357|ENST00000331442|H1-5;ENSG00000187837|ENST00000343677|H1-2	70.39856735676683	0.2324169829117963	2				NaN	NaN	0	NaN	6471	3364	9833
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9838	27.98	NaN	12500	30	0	2503.7	0.106	+			45519	TYHPPGQTF	9	76	524.2486001959339	1046.4826474586678	2	524.2484741210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TYHPPGQTF_	FCGBP-ACSS2|1|fusion;nc|ENSG00000275395|Q9Y6R7|FCGBP	113.41158876095287	0.025516849225023126	2				NaN	NaN	0	NaN	6472	3364	9833
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9839	27.982	NaN	7142.6	30	0	2820.4	0.106	+			16584	HGDSAMHL	8	59	434.1930347099791	866.3715164867582	2	434.1928405761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HGDSAMHL_	ENSG00000077150|ENST00000661543|NFKB2;nc|ENSG00000077150|Q00653-4|NFKB2	33.51558372728122	0.7005509609380386	2				NaN	NaN	0	NaN	6473	3364	9833
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9840	27.984	NaN	6593.1	30	0	1553.3	0.033			+	46010	VAVHLPTL	8	61	425.26341857467014	848.5122842161403	2	425.26312255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VAVHLPTL_	REV__ENSG00000029534|ENST00000289734|ANK1;REV__KIAA0146-ANK1|1|fusion;REV__KIAA0146-ANK1|2|fusion;REV__KIAA0146-ANK1|3|fusion;REV__KIAA0146-ANK1|4|fusion;REV__KIAA0146-ANK1|5|fusion;REV__nc|ENSG00000029534|P16157-10|ANK1;REV__nc|ENSG00000029534|P16157-11|ANK1;REV__nc|ENSG00000029534|P16157-12|ANK1;REV__nc|ENSG00000029534|P16157-13|ANK1;REV__nc|ENSG00000029534|P16157-14|ANK1;REV__nc|ENSG00000029534|P16157-15|ANK1;REV__nc|ENSG00000029534|P16157-16|ANK1;REV__nc|ENSG00000029534|P16157-2|ANK1;REV__nc|ENSG00000029534|P16157-21|ANK1;REV__nc|ENSG00000029534|P16157-4|ANK1;REV__nc|ENSG00000029534|P16157-5|ANK1;REV__nc|ENSG00000029534|P16157-6|ANK1;REV__nc|ENSG00000029534|P16157-7|ANK1;REV__nc|ENSG00000029534|P16157-8|ANK1;REV__nc|ENSG00000029534|P16157-9|ANK1;REV__nc|ENSG00000029534|P16157|ANK1	37.028477286268924	0.6747514403204248	2				NaN	NaN	0	NaN	6474	3364	9833
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9851	28.009	NaN	30546	30	0	6065.1	0.214	+			29309	NYNNQSSNF	9	83	544.2257710344497	1086.4369891356994	2	544.2259521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NYNNQSSNF_	chr12:54282662-54282800|482|460.96|0.0|25.46|+|ENST00000677249|HNRNPA1,HNRNPA1;ENSG00000135486|ENST00000340913|HNRNPA1;ENSG00000139675|ENST00000357495|HNRNPA1L2;ENSG00000224578|ENST00000565308|HNRNPA1L3;ENST00000411857.2_1_1:179425361-179425934:-|nuORF;ENST00000432375.1_1_6:32293532-32293889:+|nuORF;ENST00000444886.1_1_9:128358610-128358904:+|nuORF;nc|ENSG00000135486|P09651-2|HNRNPA1;nc|ENSG00000135486|P09651-3|HNRNPA1	185.71840793949184	0.0007219834064317508	2				NaN	NaN	0	NaN	6482	3367	9850
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9852	28.012	NaN	14153	30	0	5638.8	0.106	+			35249	SALHIAIEK	9	90	327.8620574522545	980.5643429569634	3	327.8623352050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SALHIAIEK_	ENSG00000187688|ENST00000338560|TRPV2;TRPV2|p.I444Sfs*23|3|0.39|ENSG00000187688|chr17:16427521-16427521|G/-|frameshift_variant	51.19269402634007	0.2889735674168909	2				NaN	NaN	0	NaN	6483	3367	9850
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9853	28.015	NaN	12919	30	0	1150.9	0.106	+			36199	SELLKRTAL	9	88	515.8164172185145	1029.618281503829	2	515.8164672851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SELLKRTAL_	ENSG00000115947|ENST00000392857|ORC4;ENST00000495601.1_1_2:148716324-148733527:-|nuORF	87.69643885390035	0.07135982304947239	2				NaN	NaN	0	NaN	6484	3367	9850
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9854	28.016	NaN	11966	30	0	6459.1	0.106	+			31327	QIQKELSVL	9	68	529.3167696282248	1056.6189863232496	2	529.3164672851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QIQKELSVL_	ENSG00000143207|ENST00000367669|COP1;nc|ENSG00000143207|Q8NHY2-3|COP1	21.9598887501803	0.5980208138527809	2				NaN	NaN	0	NaN	6485	3367	9850
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9855	28.018	NaN	13788	30	0	1593.3	0.106	+			51594	YYQDTPKQI	9	74	578.2879590514655	1154.5613651697308	2	578.2879028320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YYQDTPKQI_	ENSG00000048162|ENST00000614830|NOP16	209.1949250693894	5.5435209957013866E-08	2				NaN	NaN	0	NaN	6486	3367	9850
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9856	28.02	NaN	8833	30	0	890.7	0.106			+	10530	EWIDPSGIGED	11	81	609.2681425577757	1216.5217321823513	2	609.26806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EWIDPSGIGED_	REV__ENSG00000090447|ENST00000204517|TFAP4	44.377184641726394	0.49804979881800077	2				NaN	NaN	0	NaN	6487	3367	9850
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9857	28.022	NaN	5502.6	30	0	1527	0.038	+			41519	SVPSSETVICR	11	79	617.8085042148396	1233.602455496479	2	617.8092041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_SVPSSETVIC(Carbamidomethyl (C))R_	ENSG00000155090|ENST00000285407|KLF10;nc|ENSG00000155090|Q13118-2|KLF10	53.08895987439943	0.38514566451266113	2				NaN	NaN	0	NaN	6488	3367	9850
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9868	28.048	NaN	32053	30	0	6344.8	0.214	+			41798	SVSQPIMVQR	10	99	572.8110572218205	1143.607561510441	2	572.8113403320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSQPIMVQR_	ENSG00000134644|ENST00000426105|PUM1;nc|ENSG00000134644|Q14671-2|PUM1;nc|ENSG00000134644|Q14671|PUM1	150.15188659993407	0.008468567113416427	2				NaN	NaN	0	NaN	6496	3370	9867
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9869	28.051	NaN	20128	30	0	3060.5	0.106	+			11653	FQHVGQTL	8	77	465.2456749530585	928.476796972917	2	465.2454528808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FQHVGQTL_	ENSG00000112159|ENST00000369393|MDN1;MDN1|p.L4077Cfs*15|1|0.16|ENSG00000112159|chr6:89680625-89680625|G/-|frameshift_variant;MDN1|p.L5278Ffs*6|1|0.18|ENSG00000112159|chr6:89652273-89652274|-/A|frameshift_variant	116.90359126533652	0.23898233959989007	2				NaN	NaN	0	NaN	6497	3370	9867
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9870	28.053	NaN	18940	30	0	2886.4	0.106	+			20311	KEQELQQTL	9	76	558.798116529309	1115.581680125418	2	558.7985229492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEQELQQTL_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	145.46060221211434	0.007927189773590037	2				NaN	NaN	0	NaN	6498	3370	9867
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9871	28.055	NaN	6587.9	30	0	845.14	0.106	+			900	AEHYTETAL	9	73	517.7431991208515	1033.471845308503	2	517.7431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEHYTETAL_	ENSG00000096063|ENST00000373825|SRPK1;ENST00000513367.1_1_6:35855779-35888866:-|nuORF;nc|ENSG00000096063|Q96SB4-3|SRPK1;nc|ENSG00000096063|Q96SB4-4|SRPK1;SRPK1|p.I192Lfs*32|1|0.31|ENSG00000096063|chr6:35874244-35874244|T/-|frameshift_variant;SRPK1|p.I192Nfs*10|1|0.27|ENSG00000096063|chr6:35874243-35874244|-/T|frameshift_variant;SRPK1|p.N487Mfs*7|1|0.08|ENSG00000096063|chr6:35869062-35869062|T/-|frameshift_variant	53.351449002276354	0.2690372970092375	2				NaN	NaN	0	NaN	6499	3370	9867
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9872	28.057	NaN	10681	30	0	1435.2	0.106				-1	 	0	74	358.19733409254513	357.19005762594514	1	358.1973876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6500	3370	9867
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9873	28.059	NaN	7176	30	0	1251.2	0.106	+			3696	ATAAAPVPSPV	11	79	490.77424738460894	979.5339418360179	2	490.7739562988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATAAAPVPSPV_	nc|ENSG00000006712|Q8N7H5-2|PAF1;nc|ENSG00000006712|Q8N7H5-3|PAF1	58.22992032128504	0.3392555181951113	2				NaN	NaN	0	NaN	6501	3370	9867
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9874	28.06	NaN	9188.2	30	0	1118.1	0.034	+			1882	AILTTVTQK	9	69	487.7977888145643	973.5810246959286	2	487.7975158691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AILTTVTQK_	ENSG00000198677|ENST00000358746|SKIC3;ENST00000513232.1_1_5:94857997-94861145:-|nuORF	124.08010499294276	0.018729767491916592	2				NaN	NaN	0	NaN	6502	3370	9867
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9886	28.086	NaN	25359	30	0	3067.5	0.214	+			15363	GTVVGLVNK	9	89	443.7716562207551	885.5287595083103	2	443.7713317871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTVVGLVNK_	ASH1L|p.H1793Ifs*7|1|0.13|ENSG00000116539|chr1:155438778-155438778|G/-|frameshift_variant;ASH1L|p.I970Lfs*9|1|0.2|ENSG00000116539|chr1:155479962-155479962|T/-|frameshift_variant;ASH1L|p.K1222Rfs*11|4|0.27|ENSG00000116539|chr1:155479205-155479205|T/-|frameshift_variant;ASH1L|p.K1533Sfs*17|1|0.25|ENSG00000116539|chr1:155478272-155478272|T/-|frameshift_variant;ASH1L|p.K2377Nfs*5|1|0.28|ENSG00000116539|chr1:155354570-155354570|T/-|frameshift_variant;ASH1L|p.N1822Tfs*2|1|0.33|ENSG00000116539|chr1:155438690-155438690|T/-|frameshift_variant;ASH1L|p.R712Efs*23|3|0.35|ENSG00000116539|chr1:155480736-155480736|T/-|frameshift_variant;ASH1L|p.S2309Ifs*11|1|0.64|ENSG00000116539|chr1:155357635-155357636|-/T|frameshift_variant;ENSG00000116539|ENST00000392403|ASH1L;nc|ENSG00000116539|Q9NR48|ASH1L	171.38481719736927	0.0025305361306121837	2				NaN	NaN	0	NaN	6511	3373	9885
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9887	28.089	NaN	20780	30	0	3683.3	0.106	+			2117	ALHEAAPSQL	10	78	518.7748729597935	1035.5351929863868	2	518.7748413085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ALHEAAPSQL_	ENSG00000119280|ENST00000366663|C1orf198;nc|nan|Q9H425-2|C1orf198;nc|nan|Q9H425-3|C1orf198	52.936696900407355	0.4300801048568001	2				NaN	NaN	0	NaN	6512	3373	9885
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9888	28.092	NaN	8124.9	30	0	528.64	0.106	+			46739	VGRITPLS	8	71	421.75861751295724	841.5026820927145	2	421.7581481933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VGRITPLS_	ENSG00000132031|ENST00000407540|MATN3;MATN3|p.T387Hfs*10|2|0.28|ENSG00000132031|chr2:20000450-20000450|T/-|frameshift_variant;nc|ENSG00000132031|O15232-2|MATN3	55.50420428727701	0.5462892107279674	2				NaN	NaN	0	NaN	6513	3373	9885
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9889	28.093	NaN	6879.3	30	0	1785.2	0.106			+	8072	DVNLNTLK	8	58	458.75854493017994	915.5025369271599	2	458.7583312988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DVNLNTLK_	REV__ENSG00000180900|ENST00000356994|SCRIB;REV__nc|ENSG00000180900|Q14160-2|SCRIB;REV__nc|ENSG00000180900|Q14160|SCRIB;REV__SCRIB|p.A803Pfs*121|1|0.21|ENSG00000180900|chr8:143805375-143805375|C/-|frameshift_variant;REV__SCRIB|p.T966Pfs*9|4|0.48|ENSG00000180900|chr8:143804682-143804682|G/-|frameshift_variant	79.71258880314673	0.32596852995588826	2				NaN	NaN	0	NaN	6514	3373	9885
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9890	28.095	NaN	9218.5	30	0	1290.2	0.106			+	16084	HDCKKHKGI	9	81	533.287115239931	1064.559677546662	2	533.2874755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HDCKKHKGI_	REV__ENSG00000070018|ENST00000261349|LRP6;REV__ENST00000540415.1_1_12:12283717-12288148:-|nuORF	51.33545320467046	0.2872990594074956	2				NaN	NaN	0	NaN	6515	3373	9885
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9891	28.097	NaN	7483.7	30	0	1625.6	0.106	+			46542	VFFRRQEL	8	75	547.8091469570544	1093.6037409809087	2	547.8091430664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VFFRRQEL_	ATR|p.N1135*|1|0.36|ENSG00000175054|chr3:142542712-142542713|-/A|frameshift_variant;ATR|p.S709Yfs*25|1|0.07|ENSG00000175054|chr3:142556093-142556094|AA/-|frameshift_variant;ATR|p.S927Qfs*4|1|0.34|ENSG00000175054|chr3:142553254-142553255|-/A|frameshift_variant;ENSG00000175054|ENST00000350721|ATR;nc|ENSG00000175054|Q13535-2|ATR;nc|ENSG00000175054|Q13535-3|ATR	51.33545320467046	0.5859736979383976	2				NaN	NaN	0	NaN	6516	3373	9885
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9892	28.099	NaN	7408.4	30	0	1052.5	0.035	+			36655	SGLTVPTSPK	10	66	493.77958159687637	985.5446102605528	2	493.7796630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SGLTVPTSPK_	ENSG00000150593|ENST00000280154|PDCD4;nc|ENSG00000150593|Q53EL6-2|PDCD4	70.8162118820467	0.27065172005956	2				NaN	NaN	0	NaN	6517	3373	9885
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9906	28.128	NaN	40306	30	0	25544	0.214			+	23728	LAVISQSLT	9	78	466.2766561545466	930.5387593758932	2	466.2762756347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LAVISQSLT_	REV__nc|ENSG00000116774|Q9NRN5-3|OLFML3	54.776311868738084	0.25715957988447635	2				NaN	NaN	0	NaN	6528	3376	9905
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9907	28.132	NaN	27487	30	0	4708.5	0.106	+			31274	QHVGIDVLK	9	82	504.7945795370865	1007.5746061409731	2	504.7908630371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QHVGIDVLK_	ENSG00000068650|ENST00000375645|ATP11A	49.536043120802724	0.308405419312776	2				NaN	NaN	0	NaN	6529	3376	9905
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9908	28.134	NaN	11030	30	0	1164.7	0.106	+			46165	VDVEQHTL	8	77	470.73906035065073	939.4635677681015	2	470.7398681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VDVEQHTL_	ENSG00000134057|ENST00000256442|CCNB1;ENSG00000157456|ENST00000288207|CCNB2;nc|ENSG00000134057|P14635-2|CCNB1	82.7504851949679	0.3006553482314138	2				NaN	NaN	0	NaN	6530	3376	9905
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9909	28.135	NaN	8403.6	30	0	548.58	0.106	+			46332	VEKKPLVAL	9	75	498.82636547755453	995.6381780219091	2	498.82623291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VEKKPLVAL_	ENSG00000196116|ENST00000355295|TDRD7;nc|ENSG00000196116|Q8NHU6-2|TDRD7;nc|ENSG00000196116|Q8NHU6-3|TDRD7	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	6531	3376	9905
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9910	28.137	NaN	5540.7	30	0	714.9	0.106				-1	CGKDCRLSDFI	11	83	678.3090472083842	1354.6035414835683	2	678.3084716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))C(Carbamidomethyl (C))GKDCRLSDFI_	ZNF727|p.T188I|1|0.03|ENSG00000214652|chr7:64077612-64077612|C/T|missense_variant	35.15202426646627	0.6210751305041943	2				NaN	NaN	0	NaN	6532	3376	9905
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9911	28.139	NaN	11289	30	0	2163.6	0.036	+			24186	LEQASGASSSQ	11	78	532.7461747313339	1063.4777965294677	2	532.7462158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LEQASGASSSQ_	ENSG00000170892|ENST00000396388|TSEN34	85.86182877749512	0.11571513784830015	2				NaN	NaN	0	NaN	6533	3376	9905
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9912	28.14	NaN	7136.9	30	0	1041.3	0.141			+	8607	ECLANQLTPL	10	72	551.284403001478	1100.554253069756	2	551.2852172851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ECLANQLTPL_	REV__LTR7B_dup599|chr13:43059672-43060100:-|1.016192942152016|0.1328468061351861|2.94|472.0|16|3|sense	47.227680397652996	0.4825456260682108	2				NaN	NaN	0	NaN	6534	3376	9905
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9926	28.171	NaN	21148	30	0	5493.2	0.214	+			22651	KTYGEIFEK	9	82	557.7930678470791	NaN	0	557.7932739257812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTYGEIFEK_	ENSG00000151366|ENST00000281031|NDUFC2;nc|ENSG00000151366|O95298-2|NDUFC2	142.36107225718385	0.0009557606088349292	2				NaN	NaN	0	NaN	6545	3379	9925
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9927	28.175	NaN	12825	30	0	972.2	0.106			+	26382	LTDQFAKQI	9	76	532.2931915284993	1062.5718301237985	2	532.2933349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LTDQFAKQI_	REV__CEP152|p.E1488Ifs*9|1|0.07|ENSG00000103995|chr15:48738920-48738921|-/TAATGAAAGACTTGGTTTAAAAGTAT|frameshift_variant;REV__CEP152|p.I1277Lfs*20|1|0.2|ENSG00000103995|chr15:48744246-48744246|T/-|frameshift_variant;REV__CEP152|p.L1674Tfs*23|1|0.09|ENSG00000103995|chr15:48738362-48738363|-/T|frameshift_variant;REV__ENSG00000103995|ENST00000380950|CEP152;REV__nc|ENSG00000103995|O94986-1|CEP152;REV__nc|ENSG00000103995|O94986-2|CEP152;REV__nc|ENSG00000103995|O94986-3|CEP152	101.25262130126117	0.03792372629710479	2				NaN	NaN	0	NaN	6546	3379	9925
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9928	28.177	NaN	15775	30	0	1191.6	0.106			+	-1	LEQKKMLCE	9	91	589.7980871334541	1177.5816213337082	2	589.8064575195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LEQKKMLC(Carbamidomethyl (C))E_	REV__ENSG00000072786|ENST00000176763|STK10	101.60071028292904	0.0375685401170269	2				NaN	NaN	0	NaN	6547	3379	9925
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9929	28.179	NaN	15059	30	0	2570.8	0.106				-1	 	0	85	540.2903353414521	539.283058874852	1	540.2904052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6548	3379	9925
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9930	28.18	NaN	11699	30	0	1107.2	0.106	+			24188	LEQDRVQSL	9	82	544.2910929070533	1086.5676328809066	2	544.29150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LEQDRVQSL_	ENSG00000112339|ENST00000367837|HBS1L;HBS1L|p.G196Dfs*40|1|0.3|ENSG00000112339|chr6:134997611-134997611|T/-|frameshift_variant;nc|ENSG00000112339|Q9Y450-2|HBS1L;nc|ENSG00000112339|Q9Y450-4|HBS1L	59.93077597824379	0.21419174904018318	2				NaN	NaN	0	NaN	6549	3379	9925
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9931	28.182	NaN	6526	30	0	745.32	0.038				-1	TRCYRVGYC	9	80	617.7764263743536	1233.5382998155071	2	617.7765502929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Carbamidomethyl (C)	_TRC(Carbamidomethyl (C))YRVGYC(Carbamidomethyl (C))_	ENSG00000172046|ENST00000417901|USP19;nc|ENSG00000172046|O94966-3|USP19;nc|ENSG00000172046|O94966-4|USP19;nc|ENSG00000172046|O94966-5|USP19;nc|ENSG00000172046|O94966-7|USP19;nc|ENSG00000172046|O94966|USP19	24.20275056022122	0.577060078256802	2				NaN	NaN	0	NaN	6550	3379	9925
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9932	28.183	NaN	5959.5	30	0	862.64	0.143			+	21411	KMRRRCFPL	9	71	603.8389190601168	1205.6632851870336	2	603.8389282226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KMRRRCFPL_	REV__nc|ENSG00000109670|Q969H0-4|FBXW7	36.446750945000026	0.4619375763483977	2				NaN	NaN	0	NaN	6551	3379	9925
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9946	28.214	NaN	17249	30	0	2206.5	0.214			+	-1	CNCPPCYMQ	9	84	537.6802090464295	1073.3458651596588	2	537.6812744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_CNCPPCYM(Oxidation (M))Q_	REV__ENSG00000050730|ENST00000057513|TNIP3;REV__ENST00000511909.5_1_4:122053805-122071269:-|nuORF;REV__nc|ENSG00000050730|Q96KP6-2|TNIP3;REV__nc|ENSG00000050730|Q96KP6-3|TNIP3;REV__TNIP3|p.G271S|1|0.13|ENSG00000050730|chr4:121141890-121141890|C/T|missense_variant	29.14955571784316	0.5308295550522326	2				NaN	NaN	0	NaN	6562	3382	9945
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9947	28.218	NaN	9615.3	30	0	1597.8	0.106			+	37773	SLVTACKV	8	67	439.24413134504243	876.4737097568849	2	439.243896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SLVTAC(Carbamidomethyl (C))KV_	REV__ENSG00000130449|ENST00000252744|ZSWIM6	87.75429964447693	0.2842685068779738	2				NaN	NaN	0	NaN	6563	3382	9945
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9948	28.22	NaN	12281	30	0	1254.5	0.106	+			2207	ALQEIYNQK	9	82	553.7961088661289	1105.5776647990576	2	553.7960815429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ALQEIYNQK_	ENSG00000160216|ENST00000291572|AGPAT3;ENST00000484865.1_1_21:45391291-45401085:+|nuORF;nc|ENSG00000160216|Q9NRZ7-2|AGPAT3;nc|ENSG00000160216|Q9NRZ7-3|AGPAT3	127.46168284122857	0.016682644177004526	2				NaN	NaN	0	NaN	6564	3382	9945
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9949	28.222	NaN	12745	30	0	817.49	0.106	+			11017	FEKIHQETF	9	84	589.7980871334541	1177.5816213337082	2	589.7984008789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FEKIHQETF_	ENSG00000189091|ENST00000302516|SF3B3;nc|ENSG00000189091|Q15393-2|SF3B3	102.95473732560676	0.036186905769664095	2				NaN	NaN	0	NaN	6565	3382	9945
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9950	28.224	NaN	11651	30	0	1420.4	0.106	+			36587	SFYVGKLY	8	90	488.75996263142196	975.5053723296439	2	488.7599792480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SFYVGKLY_	ENST00000561328.1_1_15:60734582-60741127:-|nuORF	45.9519527083369	0.6193794311207887	2				NaN	NaN	0	NaN	6566	3382	9945
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9951	28.226	NaN	4792.2	30	0	1378	0.031				-1	 	0	57	349.1639109905653	696.3132690479306	2	349.164794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6567	3382	9945
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9952	28.226	NaN	3281.7	30	0	417.87	0.141			+	-1	VKMGMVAKR	9	67	345.86583738855387	NaN	0	345.8657531738281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_VKMGM(Oxidation (M))VAKR_	REV__ENST00000332246.10_1_8:19363479-19442712:-|nuORF;REV__ENST00000397998.7_1_8:19363479-19459293:-|nuORF;REV__ENST00000454498.6_1_8:19363479-19448754:-|nuORF;REV__ENST00000517494.1_2_8:19363479-19615372:-|nuORF	26.69291269510374	0.34280015626154364	2				NaN	NaN	0	NaN	6568	3382	9945
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9965	28.256	NaN	25921	30	0	13021	0.213	+			34511	RVFVVGVGMTK	11	87	604.8449258454659	1207.6752987577318	2	604.84521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_RVFVVGVGM(Oxidation (M))TK_	ENSG00000116171|ENST00000371514|SCP2;ENST00000528311.5_1_1:53392996-53413692:+|nuORF;nc|ENSG00000116171|P22307-3|SCP2;nc|ENSG00000116171|P22307-7|SCP2;nc|ENSG00000116171|P22307-8|SCP2	79.07001860377117	0.16012584326255155	2				NaN	NaN	0	NaN	6578	3385	9964
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9966	28.259	NaN	18318	30	0	2089.5	0.106	+			21590	KPITTGGVTY	10	86	518.7893025370578	1035.5640521409155	2	518.7877807617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KPITTGGVTY_	ENSG00000115641|ENST00000530340|FHL2	89.02883481214508	0.13663399911061233	2				NaN	NaN	0	NaN	6579	3385	9964
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9967	28.261	NaN	10985	30	0	1898.8	0.106				-1	 	0	86	336.5340769935905	1006.5804015809715	3	336.53436279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6580	3385	9964
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9968	28.263	NaN	29144	30	0	5326.9	0.106			+	29248	NWWHLCSL	8	85	529.7477079417177	1057.4808629502354	2	529.7640991210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NWWHLCSL_	REV__ENST00000467585.1_1_3:186502182-186503751:+|nuORF	50.0245360154114	0.5941082100236891	2				NaN	NaN	0	NaN	6581	3385	9964
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9969	28.265	NaN	9828	30	0	1251.7	0.106	+			45490	TYDNVHQQF	9	82	576.2598516283749	NaN	0	576.2603759765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TYDNVHQQF_	ENSG00000138639|ENST00000395184|ARHGAP24;nc|ENSG00000138639|Q8N264-2|ARHGAP24;nc|ENSG00000138639|Q8N264-3|ARHGAP24	120.8684288430529	0.001996491448359331	2				NaN	NaN	0	NaN	6582	3385	9964
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9970	28.267	NaN	7552.1	30	0	627.71	0.106	+			41542	SVQDSSVLVQR	11	80	609.3283865811496	1216.6422202290992	2	609.3286743164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVQDSSVLVQR_	ENSG00000083097|ENST00000349129|DOP1A	137.39636686458226	0.0007153481852768362	2				NaN	NaN	0	NaN	6583	3385	9964
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9971	28.269	NaN	7542.8	30	0	1002.1	0.035	+			12532	GEFKQTSSF	9	72	515.7457512027495	NaN	0	515.7459716796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GEFKQTSSF_	ENSG00000158769|ENST00000368026|F11R;nc|ENSG00000158769|Q9Y624-2|F11R	65.46538089061403	0.1260090208616529	2				NaN	NaN	0	NaN	6584	3385	9964
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9984	28.296	NaN	29274	30	0	4918.6	0.214				-1	 	0	80	529.7477079417177	1057.4808629502354	2	529.7477416992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6594	3388	9983
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9985	28.3	NaN	18293	30	0	2825	0.106	+			43578	TIFGKAHSL	9	76	487.2771341409265	972.539715348653	2	487.2767639160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TIFGKAHSL_	ENSG00000110514|ENST00000706887|MADD;nc|ENSG00000110514|Q8WXG6-2|MADD;nc|ENSG00000110514|Q8WXG6-3|MADD;nc|ENSG00000110514|Q8WXG6-4|MADD;nc|ENSG00000110514|Q8WXG6-5|MADD;nc|ENSG00000110514|Q8WXG6-6|MADD;nc|ENSG00000110514|Q8WXG6-7|MADD;nc|ENSG00000110514|Q8WXG6-8|MADD;nc|ENSG00000110514|Q8WXG6|MADD	101.45984612302182	0.0377122763612125	2				NaN	NaN	0	NaN	6595	3388	9983
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9986	28.302	NaN	9266	30	0	2758.8	0.106	+			37456	SLIMGSMTLQ	10	66	540.7751896732817	1079.5358264133633	2	540.7755737304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLIMGSMTLQ_	ENST00000295049.8_1_2:198540403-198540484:-|nuORF	39.252832667884924	0.5560298534376815	2				NaN	NaN	0	NaN	6596	3388	9983
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9987	28.304	NaN	9173.6	30	0	1240.2	0.106	+			3614	ASVSTVLTSK	10	75	496.78455054031275	991.5545481474255	2	496.7845458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASVSTVLTSK_	ENSG00000188536|ENST00000251595|HBA2;ENSG00000206172|ENST00000320868|HBA1	131.115847015877	0.013122790858444951	2				NaN	NaN	0	NaN	6597	3388	9983
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9988	28.306	NaN	11564	30	0	4633.7	0.106	+			2363	ANAVNEGTYT	10	82	520.2401869579002	NaN	0	520.2386474609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ANAVNEGTYT_	ENSG00000189409|ENST00000356026|MMP23B;nc|ENSG00000189409|O75900-2|MMP23B;nc|ENSG00000189409|O75900-3|MMP23B	40.05817265558897	0.3684561582319974	2				NaN	NaN	0	NaN	6598	3388	9983
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9989	28.308	NaN	6598.2	30	0	563.89	0.106	+			32748	RAPVPASEL	9	71	470.26675974288264	938.5189665525653	2	470.2665100097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RAPVPASEL_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	6599	3388	9983
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	9990	28.309	NaN	7916.3	30	0	2465.1	0.037	+			6651	AYVHMVTHF	9	77	374.17937917449217	1119.5163081236765	3	374.1796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_AYVHM(Oxidation (M))VTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	47.657333605630114	0.33044192980041115	2				NaN	NaN	0	NaN	6600	3388	9983
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10001	28.335	NaN	27858	30	0	7415.3	0.214	+			45520	TYHPPGQTF	9	81	524.2486001959339	1046.4826474586678	2	524.2485961914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TYHPPGQTF_	FCGBP-ACSS2|1|fusion;nc|ENSG00000275395|Q9Y6R7|FCGBP	162.25246889848123	0.0040893836092247005	2				NaN	NaN	0	NaN	6608	3391	10000
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10002	28.338	NaN	37622	30	0	3272.4	0.106	+			20185	KEKYIDQEEL	10	90	647.82965403711	1293.64475514102	2	647.8297729492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEKYIDQEEL_	ENSG00000080824|ENST00000216281|HSP90AA1;ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000507090.2_1_4:13338641-13339112:+|nuORF;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;HSP90AA1|p.K419Nfs*3|1|0.25|ENSG00000080824|chr14:102083874-102083874|T/-|frameshift_variant;HSP90AA1|p.S330Qfs*48|1|0.21|ENSG00000080824|chr14:102084558-102084558|A/-|frameshift_variant;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000205940|Q58FF8|HSP90AB2P;nc|ENSG00000224411|Q14568|HSP90AA2P	188.9123650225555	0.0003434289860817577	2				NaN	NaN	0	NaN	6609	3391	10000
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10003	28.34	NaN	10603	30	0	1018.5	0.106	+			36052	SEISSATKL	9	64	468.25573884773945	934.4969247622789	2	468.2553405761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEISSATKL_	ATRX|p.I1049*|1|0.07|ENSG00000085224|chrX:77682111-77682111|T/-|frameshift_variant;ATRX|p.I1049Nfs*4|1|0.15|ENSG00000085224|chrX:77682110-77682111|-/T|frameshift_variant;ATRX|p.K993Rfs*10|1|0.26|ENSG00000085224|chrX:77682278-77682278|T/-|frameshift_variant;ATRX|p.N1318Ifs*28|1|0.39|ENSG00000085224|chrX:77663549-77663549|T/-|frameshift_variant;ATRX|p.Q1385Sfs*6|1|0.26|ENSG00000085224|chrX:77656621-77656622|-/A|frameshift_variant;ATRX|p.R840Kfs*9|1|0.36|ENSG00000085224|chrX:77682737-77682738|-/T|frameshift_variant;ENSG00000085224|ENST00000373344|ATRX;nc|ENSG00000085224|P46100-2|ATRX;nc|ENSG00000085224|P46100-3|ATRX;nc|ENSG00000085224|P46100-4|ATRX;nc|ENSG00000085224|P46100-5|ATRX;nc|ENSG00000085224|P46100-6|ATRX	88.17693792209575	0.07000514020414955	2				NaN	NaN	0	NaN	6610	3391	10000
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10004	28.342	NaN	15293	30	0	5063.3	0.106			+	-1	ENWSMELQE	9	70	591.2433426421486	1180.4721323510971	2	591.2435302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_ENWSM(Oxidation (M))ELQE_	REV__CEP152|p.E1488Ifs*9|1|0.07|ENSG00000103995|chr15:48738920-48738921|-/TAATGAAAGACTTGGTTTAAAAGTAT|frameshift_variant;REV__CEP152|p.E966Ffs*23|1|0.03|ENSG00000103995|chr15:48756352-48756353|-/AGAAGGAGACAGAA|frameshift_variant;REV__CEP152|p.I1277Lfs*20|1|0.2|ENSG00000103995|chr15:48744246-48744246|T/-|frameshift_variant;REV__CEP152|p.L1674Tfs*23|1|0.09|ENSG00000103995|chr15:48738362-48738363|-/T|frameshift_variant;REV__CEP152|p.Q965Lfs*16|1|0.02|ENSG00000103995|chr15:48756354-48756355|-/ACAAACTTGTCTA|frameshift_variant;REV__ENSG00000103995|ENST00000380950|CEP152;REV__nc|ENSG00000103995|O94986-1|CEP152;REV__nc|ENSG00000103995|O94986-2|CEP152;REV__nc|ENSG00000103995|O94986-3|CEP152	26.69291269510374	0.5537881896960711	2				NaN	NaN	0	NaN	6611	3391	10000
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10005	28.344	NaN	9991	30	0	1694.8	0.106	+			24294	LFATARERY	9	85	563.803985075015	1125.59341721683	2	563.8040771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LFATARERY_	ENSG00000147036|ENST00000378619|LANCL3;nc|ENSG00000147036|Q6ZV70-2|LANCL3	29.14955571784316	0.5308295550522326	2				NaN	NaN	0	NaN	6612	3391	10000
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10006	28.346	NaN	5053.8	30	0	990.04	0.106				-1	 	0	68	343.1987245710591	684.3828962089182	2	343.1986999511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6613	3391	10000
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10007	28.348	NaN	6686.6	30	0	963.49	0.034	+			15752	GVSLMTVPK	9	74	474.2650862377022	946.5156195422044	2	474.2647705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_GVSLM(Oxidation (M))TVPK_	ENST00000284202.8_1_18:22006682-22007982:+|nuORF	93.1432384553994	0.056003526918089595	2				NaN	NaN	0	NaN	6614	3391	10000
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10019	28.373	NaN	5256.4	30	0	1765.2	0.214				-1	 	0	77	329.2194592231126	656.4243655130252	2	329.219482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6623	3394	10018
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10020	28.377	NaN	7351.7	30	0	1909.1	0.106				-1	 	0	68	344.2247994355438	686.4350459378876	2	344.224853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6624	3394	10018
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10021	28.379	NaN	7465.1	30	0	734.96	0.106	+			10200	ETEKLQKQL	9	73	558.8164108583276	1115.618268783455	2	558.817626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ETEKLQKQL_	ENSG00000173805|ENST00000347901|HAP1;nc|ENSG00000173805|P54257|HAP1	62.107414245175825	0.1960472003779324	2				NaN	NaN	0	NaN	6625	3394	10018
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10022	28.381	NaN	8076.2	30	0	1520.9	0.106	+			34143	RSVNEDDN	8	71	474.70396874161275	947.3933845500255	2	474.7034912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RSVNEDDN_	ENSG00000180182|ENST00000324817|MED14	34.172542307311794	0.6954784234644539	2				NaN	NaN	0	NaN	6626	3394	10018
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10023	28.382	NaN	5007.5	30	0	583.5	0.106	+			47829	VSKTKEGKYR	10	75	598.3433028320518	1194.6720527309035	2	598.3432006835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSKTKEGKYR_	ENSG00000151704|ENST00000392666|KCNJ1;nc|ENSG00000151704|P48048-3|KCNJ1;nc|ENSG00000151704|P48048|KCNJ1	38.753607047826485	0.5606299674732264	2				NaN	NaN	0	NaN	6627	3394	10018
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10024	28.384	NaN	6369.4	30	0	1752	0.106				-1	EEKIELLCQ	9	66	581.2931688328052	1160.5717847324104	2	581.2922973632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_EEKIELLC(Carbamidomethyl (C))Q_	ENSG00000114742|ENST00000302313|WDR48;ENST00000466405.1_1_3:39133106-39135740:+|nuORF;nc|ENSG00000114742|Q8TAF3-2|WDR48;nc|ENSG00000114742|Q8TAF3-3|WDR48;nc|ENSG00000114742|Q8TAF3-4|WDR48;nc|ENSG00000114742|Q8TAF3-5|WDR48	32.81241826257853	0.4965981579233955	2				NaN	NaN	0	NaN	6628	3394	10018
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10025	28.386	NaN	7039.8	30	0	955.92	0.037			+	-1	QTFCRITLP	9	74	568.2991759002574	1134.5837988673147	2	568.2994384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_QTFC(Carbamidomethyl (C))RITLP_	REV__ENSG00000160013|ENST00000291294|PTGIR	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	6629	3394	10018
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10037	28.412	NaN	39504	30	0	2899.8	0.214	+			23266	KYKDAANLL	9	93	518.2954180828515	NaN	0	518.2954711914062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KYKDAANLL_	ENSG00000126214|ENST00000334553|KLC1;KLC1|p.N469Tfs*18|1|0.15|ENSG00000126214|chr14:103677436-103677436|A/-|frameshift_variant;nc|ENSG00000126214|Q07866-10|KLC1;nc|ENSG00000126214|Q07866-2|KLC1;nc|ENSG00000126214|Q07866-3|KLC1;nc|ENSG00000126214|Q07866-4|KLC1;nc|ENSG00000126214|Q07866-5|KLC1;nc|ENSG00000126214|Q07866-6|KLC1;nc|ENSG00000126214|Q07866-7|KLC1;nc|ENSG00000126214|Q07866-8|KLC1;nc|ENSG00000126214|Q07866|KLC1	80.45461616416974	0.0698259577396595	2				NaN	NaN	0	NaN	6638	3397	10036
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10038	28.416	NaN	24234	30	0	8667.7	0.106			+	50986	YINLKYATL	9	80	366.8779262927433	NaN	0	366.8779602050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YINLKYATL_	REV__ENST00000523153.2_1_8:54885384-54885555:+|nuORF	66.42927471994793	0.121898005645852	2				NaN	NaN	0	NaN	6639	3397	10036
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10039	28.418	NaN	23715	30	0	4911.1	0.106	+			36429	SETVDKLLSE	10	89	374.19617522962614	1119.5666962890784	3	374.1962585449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SETVDKLLSE_	ENSG00000177380|ENST00000334186|PPFIA3;ENST00000421230.6_1_19:49631605-49643027:+|nuORF;ENST00000602716.5_1_19:49631560-49640169:+|nuORF;nc|ENSG00000177380|O75145-2|PPFIA3;PPFIA3|p.A911Rfs*78|1|0.2|ENSG00000177380|chr19:49142984-49142985|-/C|frameshift_variant;PPFIA3|p.S658Pfs*70|1|0.24|ENSG00000177380|chr19:49138317-49138317|C/-|frameshift_variant	41.42661286455405	0.5359995577334734	2				NaN	NaN	0	NaN	6640	3397	10036
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10040	28.42	NaN	10277	30	0	3444.8	0.106			+	10051	ESEKIESQL	9	82	531.7698413589408	1061.5251297846814	2	531.7696533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ESEKIESQL_	REV__tr|U7SEA4|U7SEA4_FUSNUHemolysinactivation/secretionproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02368PE=4SV=1	67.49366992349736	0.1516260258713357	2				NaN	NaN	0	NaN	6641	3397	10036
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10041	28.421	NaN	11094	30	0	838.92	0.106			+	18521	ISKSHVSTTY	10	79	561.7931410003806	1121.5717290675611	2	561.793701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ISKSHVSTTY_	REV__ENST00000392981.6_1_3:142133056-142136003:-|nuORF	77.31757898189308	0.2175361111083648	2				NaN	NaN	0	NaN	6642	3397	10036
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10042	28.423	NaN	6516.8	30	0	605.62	0.106	+			36503	SEYSVHSSL	9	79	504.73610176308745	1007.4576505929749	2	504.735595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SEYSVHSSL_	BUB1|p.V819Gfs*61|1|0.11|ENSG00000169679|chr2:110642126-110642127|-/C|frameshift_variant;ENSG00000169679|ENST00000302759|BUB1;ENST00000465029.5_1_2:111419157-111435602:-|nuORF;ENST00000468927.1_1_2:111423713-111425408:-|nuORF;nc|ENSG00000169679|O43683-2|BUB1;nc|ENSG00000169679|O43683-3|BUB1	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	6643	3397	10036
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10043	28.425	NaN	8786.9	30	0	1386.1	0.036	+			11023	FEKKYVATL	9	79	549.8147087072281	1097.614864481256	2	549.8132934570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FEKKYVATL_	ENSG00000132341|ENST00000543796|RAN	136.98908636845044	0.011892605960677736	2				NaN	NaN	0	NaN	6644	3397	10036
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10055	28.451	NaN	13127	30	0	2283.7	0.214	+			4558	ATLEETLVKK	10	79	566.3349784492733	1130.6554039653465	2	566.3350219726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATLEETLVKK_	ENSG00000254093|ENST00000314787|PINX1	173.2355992304161	0.0026567392549711405	2				NaN	NaN	0	NaN	6653	3400	10054
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10056	28.455	NaN	17293	30	0	1526.9	0.106	+			13011	GEVEKYQQL	9	82	547.2805076351874	1092.5464623371747	2	547.2802124023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEVEKYQQL_	ENSG00000204220|ENST00000374606|PFDN6;ENST00000395134.3_1_6:33257633-33258228:+|nuORF;ENST00000491382.1_1_6:33257633-33258228:+|nuORF	139.97047562133406	0.010493916756945389	2				NaN	NaN	0	NaN	6654	3400	10054
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10057	28.457	NaN	8694.4	30	0	4073.6	0.106	+			46382	VELEQKIQ	8	68	493.77958159687637	985.5446102605528	2	493.7793273925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VELEQKIQ_	CENPF|p.S2957Afs*6|1|0.52|ENSG00000117724|chr1:214657310-214657310|A/-|frameshift_variant;ENSG00000117724|ENST00000366955|CENPF	58.78195531508484	0.5138399468736706	2				NaN	NaN	0	NaN	6655	3400	10054
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10058	28.459	NaN	8716	30	0	5261.6	0.106			+	32813	RAVPVLKSG	9	65	463.79281675248734	925.5710805717747	2	463.79254150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RAVPVLKSG_	REV__ENSG00000103485|ENST00000395384|QPRT	21.9598887501803	0.5980208138527809	2				NaN	NaN	0	NaN	6656	3400	10054
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10059	28.46	NaN	9488.9	30	0	1516.5	0.106	+			25455	LPQHQVPAY	9	78	526.780159742819	1051.545766552438	2	526.7803955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LPQHQVPAY_	ENSG00000130522|ENST00000252818|JUND	50.0245360154114	0.3026755932229825	2				NaN	NaN	0	NaN	6657	3400	10054
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10060	28.462	NaN	9109.1	30	0	1770.2	0.106			+	13381	GLAYTWSI	8	67	455.73500203163354	NaN	0	455.7350158691406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GLAYTWSI_	REV__ENSG00000073598|ENST00000158009|FNDC8	79.9392285194092	1.7418937515398478	2				NaN	NaN	0	NaN	6658	3400	10054
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10061	28.464	NaN	4740.1	30	0	645.27	0.033	+			45887	VAPFGNTF	8	62	426.713953415591	NaN	0	426.7140197753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VAPFGNTF_	nc|ENSG00000196313|Q96HA1-3|POM121	44.53106598305862	1.7418937515398478	2				NaN	NaN	0	NaN	6659	3400	10054
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10074	28.492	NaN	20285	30	0	5055	0.214	+			38800	SSMTAVLQK	9	80	482.75975920805354	963.5049654829071	2	482.76007080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSMTAVLQK_	ENST00000470658.1_1_21:44293721-44296875:-|nuORF	158.07458414430337	0.004987072822166904	2				NaN	NaN	0	NaN	6669	3403	10073
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10075	28.496	NaN	7060.4	30	0	1387.9	0.106			+	72	AAATSVIAR	9	62	430.25356048825074	858.4925680433015	2	430.2534484863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAATSVIAR_	REV__ENSG00000139364|ENST00000682704|TMEM132B;REV__nc|ENSG00000139364|Q14DG7-3|TMEM132B;REV__nc|ENSG00000139364|Q14DG7|TMEM132B	96.19043198914106	0.047412499214244314	2				NaN	NaN	0	NaN	6670	3403	10073
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10076	28.498	NaN	24058	30	0	8570.9	0.106			+	13619	GLYSRIVT	8	84	454.7637464855997	907.5129400379994	2	454.7634582519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GLYSRIVT_	REV__ENSG00000185917|ENST00000332131|SETD4;REV__nc|ENSG00000185917|Q9NVD3-3|SETD4;REV__nc|ENSG00000185917|Q9NVD3-4|SETD4	47.91560031466742	0.6071945918984287	2				NaN	NaN	0	NaN	6671	3403	10073
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10077	28.499	NaN	11962	30	0	1629	0.106	+			23511	LAHAGVAL	8	79	376.226557000709	750.4385610682181	2	376.2267150878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LAHAGVAL_	ENSG00000006062|ENST00000344686|MAP3K14	33.49298260027079	0.7007254697536482	2				NaN	NaN	0	NaN	6672	3403	10073
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10078	28.501	NaN	6386	30	0	860.92	0.106			+	47231	VMKHMVIGL	9	67	514.2930367589682	1026.5715205847364	2	514.29296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VMKHMVIGL_	REV__ENST00000244221.8_1_2:71415458-71415581:-|nuORF	40.77816245573522	0.41113185337114944	2				NaN	NaN	0	NaN	6673	3403	10073
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10079	28.503	NaN	6901.1	30	0	543.94	0.106			+	2345	AMTGPPRVL	9	66	471.26640108808647	940.518249242973	2	471.2685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AMTGPPRVL_	REV__CDHR5|p.G498Efs*13|1|0.36|ENSG00000099834|chr11:619066-619066|C/-|frameshift_variant;REV__CDHR5|p.G554Rfs*161|1|0.26|ENSG00000099834|chr11:618899-618900|-/G|frameshift_variant;REV__CDHR5|p.G554Vfs*221|1|0.09|ENSG00000099834|chr11:618900-618900|G/-|frameshift_variant;REV__ENSG00000099834|ENST00000397542|CDHR5;REV__nc|ENSG00000099834|Q9HBB8-2|CDHR5;REV__nc|ENSG00000099834|Q9HBB8-4|CDHR5	40.77816245573522	0.41113185337114944	2				NaN	NaN	0	NaN	6674	3403	10073
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10080	28.505	NaN	8840.4	30	0	4552.2	0.038	+			24017	LEEDHLGFLQ	10	65	400.8682722845076	1199.5829874537228	3	400.86834716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LEEDHLGFLQ_	ENST00000301887.8_1_11:64755941-64756001:-|nuORF	31.634271133179894	0.6214930414500597	2				NaN	NaN	0	NaN	6675	3403	10073
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10092	28.53	NaN	63948	30	0	9592.6	0.209	+			36057	SEITTKDL	8	97	453.74252413809256	905.4704953429851	2	453.7422180175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEITTKDL_	ENSG00000187514|ENST00000409115|PTMA;ENST00000468027.5_1_2:232573416-232577283:+|nuORF;nc|ENSG00000187514|P06454|PTMA	162.25246889848123	0.0741621453821622	2				NaN	NaN	0	NaN	6684	3406	10091
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10093	28.534	NaN	105540	30	0	14627	0.106	+			3795	ATAGIIGVNR	10	102	486.28535868999256	970.5561644467851	2	486.28497314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATAGIIGVNR_	CLTC-CEP95|1|fusion;CLTC|p.A1374*|1|0.05|ENSG00000141367|chr17:59683464-59683465|-/TA|frameshift_variant;CLTC|p.D632Yfs*7|1|0.15|ENSG00000141367|chr17:59666589-59666590|-/TTACA|frameshift_variant;ENSG00000141367|ENST00000269122|CLTC;ENST00000472129.3_1_17:57725612-57733400:+|nuORF;nc|ENSG00000141367|Q00610-2|CLTC	167.22876102047192	0.004566578872041589	2				NaN	NaN	0	NaN	6685	3406	10091
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10094	28.536	NaN	27382	30	0	3186.8	0.106	+			8420	EAQPIVTKY	9	96	524.7882333627559	1047.5619137923118	2	524.7872924804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EAQPIVTKY_	ENSG00000214753|ENST00000301785|HNRNPUL2	120.8684288430529	0.02067403653475984	2				NaN	NaN	0	NaN	6686	3406	10091
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10095	28.538	NaN	14271	30	0	8619.9	0.106	+			10001	ERMIAILSEN	10	58	392.54107463380774	1174.6013945016232	3	392.541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ERMIAILSEN_	ENSG00000185418|ENST00000335968|TARS3;nc|ENSG00000185418|A2RTX5-2|TARS3	28.5767321226876	0.6464621404813697	2				NaN	NaN	0	NaN	6687	3406	10091
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10096	28.54	NaN	9928.7	30	0	693.72	0.106	+			31941	QQQLEKKLPV	10	77	605.8617625994916	1209.7089722657831	2	605.861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QQQLEKKLPV_	CON__ENSEMBL:ENSBTAP00000001528;ENSG00000205726|ENST00000381318|ITSN1;ITSN1|p.P1076Tfs*2|1|0.25|ENSG00000205726|chr21:33826852-33826853|-/A|frameshift_variant;nc|ENSG00000205726|Q15811-10|ITSN1;nc|ENSG00000205726|Q15811-11|ITSN1;nc|ENSG00000205726|Q15811-12|ITSN1;nc|ENSG00000205726|Q15811-13|ITSN1;nc|ENSG00000205726|Q15811-2|ITSN1;nc|ENSG00000205726|Q15811-3|ITSN1;nc|ENSG00000205726|Q15811-4|ITSN1;nc|ENSG00000205726|Q15811-5|ITSN1;nc|ENSG00000205726|Q15811-6|ITSN1;nc|ENSG00000205726|Q15811-7|ITSN1;nc|ENSG00000205726|Q15811-8|ITSN1;nc|ENSG00000205726|Q15811-9|ITSN1	80.45461616416974	0.1919067876629769	2				NaN	NaN	0	NaN	6688	3406	10091
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10097	28.541	NaN	9630	30	0	1005.7	0.106	+			38661	SSIQGQWPK	9	78	515.7700067049085	NaN	0	515.779296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSIQGQWPK_	ARID4B|p.T939Rfs*2|2|0.22|ENSG00000054267|chr1:235182104-235182104|T/-|frameshift_variant;ENSG00000054267|ENST00000264183|ARID4B;ENST00000491632.5_1_1:235341091-235490234:-|nuORF;nc|ENSG00000054267|Q4LE39-2|ARID4B;nc|ENSG00000054267|Q4LE39-3|ARID4B;nc|ENSG00000054267|Q4LE39-4|ARID4B	53.08895987439943	0.18540527177656715	2				NaN	NaN	0	NaN	6689	3406	10091
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10098	28.543	NaN	6836.4	30	0	1862.7	0.037			+	23976	LDVKKTQFL	9	70	364.5532412896156	1090.6378944690468	3	364.5533142089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LDVKKTQFL_	REV__ENSG00000128311|ENST00000249042|TST	36.446750945000026	0.4619375763483977	2				NaN	NaN	0	NaN	6690	3406	10091
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10109	28.569	NaN	15441	30	0	1484.2	0.214	+			41567	SVQEYFVRK	9	77	578.3117298481026	1154.608906763005	2	578.3118286132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVQEYFVRK_	ENSG00000163781|ENST00000260810|TOPBP1;TOPBP1|p.K1266Nfs*10|1|0.13|ENSG00000163781|chr3:133616887-133616887|T/-|frameshift_variant;TOPBP1|p.R1378Sfs*18|1|0.04|ENSG00000163781|chr3:133611043-133611044|-/AAAAGAGAATGTG|frameshift_variant;TOPBP1|p.R964Efs*12|1|0.19|ENSG00000163781|chr3:133624090-133624090|T/-|frameshift_variant	102.0615471778698	0.03709830720253279	2				NaN	NaN	0	NaN	6698	3409	10108
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10110	28.573	NaN	11963	30	0	6345.5	0.106			+	49070	VVKGVWQLTTG	11	69	396.56430361964635	1186.671081459139	3	396.5641174316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVKGVWQLTTG_	REV__ENST00000370069.5_1_20:62219030-62219531:-|nuORF	30.568863376406313	0.6691487505135859	2				NaN	NaN	0	NaN	6699	3409	10108
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10111	28.575	NaN	15740	30	0	3281.4	0.106	+			49622	VYHNLKNVI	9	81	367.2128034433643	1098.616580930293	3	367.2131652832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYHNLKNVI_	ENO1|p.D318Mfs*5|1|0.43|ENSG00000074800|chr1:8864006-8864006|C/-|frameshift_variant;ENSG00000074800|ENST00000234590|ENO1;ENST00000464920.1_1_1:8921421-8930582:-|nuORF;nc|ENSG00000074800|P06733-2|ENO1	51.33545320467046	0.2872990594074956	2				NaN	NaN	0	NaN	6700	3409	10108
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10112	28.576	NaN	10998	30	0	1836.9	0.106	+			49488	VVYTSHLQLK	10	82	594.3428236489075	1186.6710943646149	2	594.3430786132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVYTSHLQLK_	ENSG00000015568|ENST00000016946|RGPD5;ENSG00000153165|ENST00000409886|RGPD3;ENSG00000153201|ENST00000283195|RANBP2;ENSG00000169629|ENST00000302558|RGPD8;ENSG00000183054|ENST00000329516|RGPD6;ENSG00000185304|ENST00000398146|RGPD2;ENSG00000187627|ENST00000641458|RGPD1;ENSG00000196862|ENST00000408999|RGPD4;ENST00000522286.5_1_2:113158797-113161561:-|nuORF;nc|ENSG00000183054|Q99666-2|RGPD5;nc|ENSG00000187627|P0DJD0|RGPD1;RANBP2|p.A864Lfs*3|1|0.3|ENSG00000153201|chr2:108758533-108758533|G/-|frameshift_variant;RANBP2|p.C2737Vfs*35|1|0.18|ENSG00000153201|chr2:108772957-108772957|T/-|frameshift_variant;RANBP2|p.F3068Lfs*10|1|0.06|ENSG00000153201|chr2:108782692-108782692|T/-|frameshift_variant;RANBP2|p.H3114Sfs*18|1|0.33|ENSG00000153201|chr2:108782827-108782828|-/T|frameshift_variant;RANBP2|p.K1989Nfs*9|1|0.05|ENSG00000153201|chr2:108766505-108766506|-/TATCCTG|frameshift_variant;RANBP2|p.K2576Nfs*63|2|0.22|ENSG00000153201|chr2:108768262-108768262|A/-|frameshift_variant;RANBP2|p.S1486Rfs*51|1|0.05|ENSG00000153201|chr2:108764996-108764997|-/ATTTTGTATTC|frameshift_variant;RGPD2|p.F1350Lfs*25|1|0.25|ENSG00000185304|chr2:87782974-87782974|A/-|frameshift_variant;RGPD3|p.V1441*|1|0.45|ENSG00000153165|chr2:106423647-106423647|T/-|frameshift_variant;RGPD4|p.K568Nfs*33|1|0.14|ENSG00000196862|chr2:107859787-107859787|A/-|frameshift_variant	167.93327368760816	0.004342583126626421	2				NaN	NaN	0	NaN	6701	3409	10108
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10113	28.578	NaN	16153	30	0	5200.4	0.106	+			49749	VYPDGIRHI	9	76	535.2933277147936	1068.572102496387	2	535.2932739257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VYPDGIRHI_	ENSG00000189091|ENST00000302516|SF3B3;ENST00000568291.2_1_16:70588380-70590279:+|nuORF	61.691277971877994	0.19951612995419254	2				NaN	NaN	0	NaN	6702	3409	10108
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10114	28.58	NaN	24227	30	0	9207.7	0.106			+	-1	VSIFMKLCL	9	91	357.19763761607675	1068.5710834484303	3	357.1978454589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_VSIFM(Oxidation (M))KLCL_	REV__ENST00000025301.3_1_13:42895410-42895458:+|nuORF	34.172542307311794	0.4838870758800184	2				NaN	NaN	0	NaN	6703	3409	10108
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10115	28.582	NaN	14768	30	0	2507.4	0.035	+			3255	ASLGLKFNK	9	83	489.2924132247702	976.5702735163404	2	489.2923278808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASLGLKFNK_	ENSG00000247077|ENST00000498926|PGAM5;nc|ENSG00000247077|Q96HS1-2|PGAM5	82.7504851949679	0.08565546331141553	2				NaN	NaN	0	NaN	6704	3409	10108
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10128	28.608	NaN	21615	30	0	2988.4	0.214	+			10989	FEGEPGNKV	9	87	488.7402983223725	975.466043711545	2	488.7400817871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FEGEPGNKV_	ENSG00000126432|ENST00000265462|PRDX5;nc|ENSG00000126432|P30044-2|PRDX5;nc|ENSG00000126432|P30044-3|PRDX5	39.252832667884924	0.4290233611298554	2				NaN	NaN	0	NaN	6714	3412	10127
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10129	28.611	NaN	8793.9	30	0	1416.9	0.106			+	133	AAGPPAVLSKP	11	76	336.5343187755295	NaN	0	336.5343322753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAGPPAVLSKP_	REV__ENST00000486209.5_1_22:21827366-21827621:-|nuORF	30.317721548370564	0.4303027717346894	2				NaN	NaN	0	NaN	6715	3412	10127
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10130	28.613	NaN	8985.4	30	0	827.86	0.106	+			18998	IVVEHIIMK	9	81	549.32317459028	1096.63179624736	2	549.3233642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_IVVEHIIM(Oxidation (M))K_	ENSG00000109133|ENST00000504986|TMEM33;TMEM33|p.L211P|1|0.2|ENSG00000109133|chr4:41954087-41954087|T/C|missense_variant	131.03138772384656	0.014687601201650916	2				NaN	NaN	0	NaN	6716	3412	10127
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10131	28.615	NaN	8432.6	30	0	1649.3	0.106			+	39038	SSSPAQPRAL	10	74	507.2722596590362	1012.5299663848724	2	507.27215576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSSPAQPRAL_	REV__ENSG00000165804|ENST00000360947|ZNF219	42.86426827375447	0.522752283233888	2				NaN	NaN	0	NaN	6717	3412	10127
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10132	28.617	NaN	6575.4	30	0	871.83	0.106			+	17946	IGPAGKAGH	9	58	404.227170500147	806.439788067094	2	404.2267761230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IGPAGKAGH_	REV__COL13A1|p.P517Qfs*9|1|0.22|ENSG00000197467|chr10:69930447-69930447|C/-|frameshift_variant;REV__ENSG00000197467|ENST00000645393|COL13A1;REV__nc|ENSG00000197467|Q5TAT6-10|COL13A1;REV__nc|ENSG00000197467|Q5TAT6-11|COL13A1;REV__nc|ENSG00000197467|Q5TAT6-2|COL13A1;REV__nc|ENSG00000197467|Q5TAT6-3|COL13A1;REV__nc|ENSG00000197467|Q5TAT6-4|COL13A1;REV__nc|ENSG00000197467|Q5TAT6-5|COL13A1;REV__nc|ENSG00000197467|Q5TAT6-6|COL13A1;REV__nc|ENSG00000197467|Q5TAT6-7|COL13A1;REV__nc|ENSG00000197467|Q5TAT6-8|COL13A1;REV__nc|ENSG00000197467|Q5TAT6-9|COL13A1;REV__nc|ENSG00000197467|Q5TAT6|COL13A1	38.80614096846853	0.43426287593479557	2				NaN	NaN	0	NaN	6718	3412	10127
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10133	28.619	NaN	4982.8	30	0	483.18	0.106	+			29049	NTELVKSPSE	10	71	552.2824207664733	1102.5502885997464	2	552.2828369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NTELVKSPSE_	ENSG00000058600|ENST00000299853|POLR3E;ENST00000564061.5_1_16:22308800-22337695:+|nuORF;nc|ENSG00000058600|Q9NVU0-2|POLR3E;nc|ENSG00000058600|Q9NVU0-3|POLR3E;nc|ENSG00000058600|Q9NVU0-4|POLR3E;nc|ENSG00000058600|Q9NVU0-5|POLR3E;POLR3E|p.G595Afs*51|1|0.33|ENSG00000058600|chr16:22326189-22326189|C/-|frameshift_variant;POLR3E|p.P340Lfs*35|1|0.38|ENSG00000058600|chr16:22322880-22322880|C/-|frameshift_variant	59.93077597824379	0.36646980200755325	2				NaN	NaN	0	NaN	6719	3412	10127
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10134	28.62	NaN	6914.7	30	0	725.82	0.035	+			38662	SSIQGQWPK	9	73	515.7700067049085	NaN	0	515.7701416015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSIQGQWPK_	ARID4B|p.T939Rfs*2|2|0.22|ENSG00000054267|chr1:235182104-235182104|T/-|frameshift_variant;ENSG00000054267|ENST00000264183|ARID4B;ENST00000491632.5_1_1:235341091-235490234:-|nuORF;nc|ENSG00000054267|Q4LE39-2|ARID4B;nc|ENSG00000054267|Q4LE39-3|ARID4B;nc|ENSG00000054267|Q4LE39-4|ARID4B	82.7504851949679	0.061958946529908215	2				NaN	NaN	0	NaN	6720	3412	10127
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10147	28.648	NaN	27371	30	0	1881.6	0.214	+			43056	TELKKELK	8	90	494.80546338210576	987.5963738310115	2	494.8051452636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TELKKELK_	tr|U7SPH1|U7SPH1_FUSNUGeranyltranstransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01735PE=3SV=1	82.24051045832904	0.30490469762271794	2				NaN	NaN	0	NaN	6730	3415	10146
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10148	28.652	NaN	20059	30	0	3003.5	0.106	+			34079	RSPPPGMGL	9	76	456.2418626152713	910.4691722973427	2	456.2416687011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RSPPPGMGL_	ENSG00000116560|ENST00000357214|SFPQ;nc|ENSG00000116560|P23246-2|SFPQ	93.19546047674547	0.05585629608842056	2				NaN	NaN	0	NaN	6731	3415	10146
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10149	28.654	NaN	23434	30	0	2532.7	0.106			+	7045	CSYQGALSR	9	80	492.731930615907	983.449308298614	2	492.73162841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_CSYQGALSR_	REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-13|TTN;REV__nc|ENSG00000155657|Q8WZ42-2|TTN;REV__nc|ENSG00000155657|Q8WZ42-4|TTN;REV__nc|ENSG00000155657|Q8WZ42-5|TTN;REV__nc|ENSG00000155657|Q8WZ42-7|TTN;REV__nc|ENSG00000155657|Q8WZ42-8|TTN;REV__nc|ENSG00000155657|Q8WZ42|TTN;REV__TTN|p.A12650Gfs*4|1|0.4|ENSG00000155657|chr2:178633489-178633490|-/T|frameshift_variant;REV__TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;REV__TTN|p.D20259Rfs*40|1|0.44|ENSG00000155657|chr2:178583105-178583106|-/T|frameshift_variant;REV__TTN|p.D21555Ifs*6|1|0.33|ENSG00000155657|chr2:178576659-178576659|G/-|frameshift_variant;REV__TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;REV__TTN|p.E15132Sfs*22|1|0.27|ENSG00000155657|chr2:178612094-178612094|C/-|frameshift_variant;REV__TTN|p.E20392Dfs*6|1|0.04|ENSG00000155657|chr2:178582357-178582358|-/TTTAAAATTA|frameshift_variant;REV__TTN|p.E20392Kfs*4|1|0.02|ENSG00000155657|chr2:178582359-178582360|-/TTTT|frameshift_variant;REV__TTN|p.E9224Gfs*8|1|0.04|ENSG00000155657|chr2:178709697-178709698|-/TCTTATGATATCTTGAC|frameshift_variant;REV__TTN|p.F18705Lfs*8|1|0.37|ENSG00000155657|chr2:178590687-178590687|A/-|frameshift_variant;REV__TTN|p.G12742Vfs*2|1|0.05|ENSG00000155657|chr2:178632983-178632983|C/-|frameshift_variant;REV__TTN|p.G14712Dfs*11|1|0.37|ENSG00000155657|chr2:178614341-178614341|G/-|frameshift_variant;REV__TTN|p.G19920Afs*12|1|0.42|ENSG00000155657|chr2:178584961-178584961|G/-|frameshift_variant;REV__TTN|p.G22029Efs*22|2|0.13|ENSG00000155657|chr2:178575125-178575125|T/-|frameshift_variant;REV__TTN|p.I10495Nfs*4|1|0.37|ENSG00000155657|chr2:178685288-178685289|-/T|frameshift_variant;REV__TTN|p.I24998Nfs*2|1|0.35|ENSG00000155657|chr2:178566216-178566217|-/T|frameshift_variant;REV__TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;REV__TTN|p.I9225Cfs*34|1|0.06|ENSG00000155657|chr2:178709695-178709696|-/ATATCCATGAGCA|frameshift_variant;REV__TTN|p.K10923Rfs*104|2|0.23|ENSG00000155657|chr2:178679362-178679362|T/-|frameshift_variant;REV__TTN|p.K11381Nfs*25|1|0.07|ENSG00000155657|chr2:178671133-178671133|T/-|frameshift_variant;REV__TTN|p.K11556Sfs*15|1|0.39|ENSG00000155657|chr2:178652287-178652287|T/-|frameshift_variant;REV__TTN|p.K14271Qfs*5|1|0.02|ENSG00000155657|chr2:178617351-178617352|-/G|frameshift_variant;REV__TTN|p.K26626Nfs*34|1|0.34|ENSG00000155657|chr2:178561331-178561331|T/-|frameshift_variant;REV__TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;REV__TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;REV__TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant;REV__TTN|p.N13487Tfs*49|1|0.34|ENSG00000155657|chr2:178621335-178621335|T/-|frameshift_variant;REV__TTN|p.N15496Ifs*16|1|0.09|ENSG00000155657|chr2:178610116-178610116|T/-|frameshift_variant;REV__TTN|p.P16126Rfs*3|1|0.25|ENSG00000155657|chr2:178607301-178607302|TG/-|frameshift_variant;REV__TTN|p.P22810Hfs*10|1|0.03|ENSG00000155657|chr2:178572780-178572781|-/AAAT|frameshift_variant;REV__TTN|p.V10632Yfs*16|1|0.16|ENSG00000155657|chr2:178683254-178683254|T/-|frameshift_variant;REV__TTN|p.V11008Sfs*13|1|0.33|ENSG00000155657|chr2:178678146-178678147|-/T|frameshift_variant;REV__TTN|p.V11345Ffs*4|1|0.4|ENSG00000155657|chr2:178672044-178672044|T/-|frameshift_variant;REV__TTN|p.V13823*|1|0.28|ENSG00000155657|chr2:178620027-178620027|C/-|frameshift_variant;REV__TTN|p.V22573Cfs*4|2|0.31|ENSG00000155657|chr2:178573492-178573492|C/-|frameshift_variant;REV__TTN|p.V27442Cfs*4|1|0.05|ENSG00000155657|chr2:178558107-178558108|-/A|frameshift_variant	95.81516180277367	0.04847050768394289	2				NaN	NaN	0	NaN	6732	3415	10146
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10150	28.656	NaN	25690	30	0	7742.1	0.106	+			10237	ETIKLGIKS	9	90	330.2058754024446	987.5957968075338	3	330.2060241699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ETIKLGIKS_	ENSG00000106302|ENST00000223026|HYAL4	40.77816245573522	0.41113185337114944	2				NaN	NaN	0	NaN	6733	3415	10146
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10151	28.657	NaN	17962	30	0	2111.2	0.106	+			29011	NSPLRENAL	9	81	507.2722596590362	1012.5299663848724	2	507.2721252441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NSPLRENAL_	ENSG00000121297|ENST00000240587|TSHZ3;TSHZ3|p.A877Pfs*28|1|0.2|ENSG00000121297|chr19:31277164-31277164|C/-|frameshift_variant;TSHZ3|p.E1034Rfs*45|1|0.07|ENSG00000121297|chr19:31276694-31276694|G/-|frameshift_variant;TSHZ3|p.M1028Nfs*30|1|0.15|ENSG00000121297|chr19:31276710-31276711|-/T|frameshift_variant	51.19269402634007	0.2889735674168909	2				NaN	NaN	0	NaN	6734	3415	10146
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10152	28.659	NaN	16846	30	0	4281.4	0.106			+	46086	VCVVRLGL	8	91	429.7651311117111	857.5157092902223	2	429.7649230957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VCVVRLGL_	REV__ENSG00000145833|ENST00000452510|DDX46;REV__ENST00000509178.5_1_5:134117763-134126202:+|nuORF;REV__nc|ENSG00000145833|Q7L014|DDX46	29.841539824830324	0.7289191502596711	2				NaN	NaN	0	NaN	6735	3415	10146
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10153	28.661	NaN	11605	30	0	1034.6	0.036	+			50653	YEDQTKPVL	9	88	546.7823843336562	NaN	0	546.7824096679688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YEDQTKPVL_	ENSG00000147853|ENST00000381809|AK3;nc|ENSG00000147853|Q9UIJ7-2|AK3;nc|ENSG00000147853|Q9UIJ7-3|AK3	96.0336014099291	0.029433397039169355	2				NaN	NaN	0	NaN	6736	3415	10146
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10170	28.695	NaN	24101	30	0	3117.7	0.214	+			15680	GVMTPLIKR	9	99	507.80991706259937	1013.6052811919988	2	507.8099365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVMTPLIKR_	ENSG00000126803|ENST00000247207|HSPA2	65.46538089061403	0.16805504838372562	2				NaN	NaN	0	NaN	6750	3418	10169
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10171	28.698	NaN	25028	30	0	1970.3	0.106	+			5322	ATVLYIVKK	9	106	517.8343475556419	1033.6541421780837	2	517.8341674804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATVLYIVKK_	ENSG00000113734|ENST00000351486|BNIP1;nc|ENSG00000113734|Q12981-1|BNIP1;nc|ENSG00000113734|Q12981-2|BNIP1;nc|ENSG00000113734|Q12981-3|BNIP1	177.3047273071476	0.0015666121956477066	2				NaN	NaN	0	NaN	6751	3418	10169
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10172	28.701	NaN	21433	30	0	12632	0.106				-1	KLMALGPIR	9	65	338.87554015759304	1013.6047910729792	3	338.8757629394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_KLM(Oxidation (M))ALGPIR_	ENSG00000127603|ENST00000564288|MACF1;nc|ENSG00000127603|O94854|MACF1;nc|ENSG00000127603|Q9UPN3-2|MACF1;nc|ENSG00000127603|Q9UPN3-3|MACF1;nc|ENSG00000127603|Q9UPN3-4|MACF1;nc|ENSG00000127603|Q9UPN3-5|MACF1;nc|ENSG00000127603|Q9UPN3|MACF1	22.579656572578934	0.5922287541734749	2				NaN	NaN	0	NaN	6752	3418	10169
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10173	28.702	NaN	12967	30	0	3341.2	0.106				-1	AYVHMVTHF	9	83	374.17937917449217	1119.5163081236765	3	374.1795959472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_AYVHM(Oxidation (M))VTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	34.172542307311794	0.4838870758800184	2				NaN	NaN	0	NaN	6753	3418	10169
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10174	28.704	NaN	5326	30	0	1645.4	0.106	+			31900	QQGKTQVL	8	51	451.258713781772	900.502874630344	2	451.2584228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QQGKTQVL_	ENSG00000158636|ENST00000695367|EMSY;ENST00000531641.1_1_11:76237526-76255878:+|nuORF;nc|ENSG00000158636|Q7Z589-2|EMSY;nc|ENSG00000158636|Q7Z589-4|EMSY;nc|ENSG00000158636|Q7Z589-5|EMSY;nc|ENSG00000158636|Q7Z589-6|EMSY;nc|ENSG00000158636|Q7Z589|EMSY	57.81127852772723	0.5234495074909924	2				NaN	NaN	0	NaN	6754	3418	10169
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10175	28.706	NaN	5973.7	30	0	1126.3	0.035	+			45521	TYHPPGQTF	9	67	524.2486001959339	1046.4826474586678	2	524.248291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TYHPPGQTF_	FCGBP-ACSS2|1|fusion;nc|ENSG00000275395|Q9Y6R7|FCGBP	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	6755	3418	10169
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10176	28.707	NaN	5654.7	30	0	955.78	0.142	+			14550	GTFGATSLQQR	11	81	583.3026586443656	1164.590764355531	2	583.3021240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GTFGATSLQQR_	ENSG00000243667|ENST00000295121|DNAAF10;ENST00000492039.6_1_2:68352461-68384592:-|nuORF;nc|ENSG00000243667|Q96MX6-2|DNAAF10	64.22387071457851	0.2857512628307259	2				NaN	NaN	0	NaN	6756	3418	10169
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10188	28.735	NaN	15923	30	0	2669.2	0.214	+			7421	DERANLPEI	9	75	528.7700336620302	1055.5255143908603	2	528.7700805664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DERANLPEI_	ENST00000587908.1_1_19:56832840-56833431:-|nuORF	113.41158876095287	0.025516849225023126	2				NaN	NaN	0	NaN	6765	3421	10187
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10189	28.738	NaN	8560.6	30	0	1205.8	0.106				-1	 	0	68	476.24880109938044	475.24152463278045	1	476.24853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6766	3421	10187
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10190	28.74	NaN	8405.9	30	0	3221.2	0.106	+			4913	ATQLLKLAH	9	56	332.20584553365404	993.5957072011622	3	332.206298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATQLLKLAH_	ENSG00000148303|ENST00000323345|RPL7A;ENST00000424559.2_1_22:19780074-19780431:+|nuORF;ENST00000434317.1_1_7:102395625-102396051:+|nuORF;ENST00000437848.1_1_1:46117146-46117242:-|nuORF;ENST00000463740.5_1_9:136215098-136217195:+|nuORF;ENST00000468834.1_1_10:33346560-33347304:-|nuORF;ENST00000473054.1_1_14:68805457-68806021:-|nuORF;ENST00000485706.5_1_9:136216467-136216912:+|nuORF;ENST00000486157.1_1_5:78825151-78825526:+|nuORF	49.536043120802724	0.308405419312776	2				NaN	NaN	0	NaN	6767	3421	10187
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10191	28.742	NaN	8409.7	30	0	1348.7	0.106	+			45676	VAAAHSVVL	9	60	433.75839334386416	865.5022337545283	2	433.75836181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VAAAHSVVL_	ENSG00000131558|ENST00000253861|EXOC4;ENST00000462055.5_1_7:132937857-133164897:+|nuORF;ENST00000486013.5_1_7:132937857-133314895:+|nuORF;EXOC4|p.N439Ifs*15|1|0.39|ENSG00000131558|chr7:133475456-133475456|A/-|frameshift_variant;EXOC4|p.N439Kfs*28|1|0.17|ENSG00000131558|chr7:133475455-133475456|-/A|frameshift_variant;nc|ENSG00000131558|Q96A65-2|EXOC4	88.64286706044652	0.06869153472052109	2				NaN	NaN	0	NaN	6768	3421	10187
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10192	28.744	NaN	18922	30	0	3884.8	0.106	+			43858	TLYNKIYQL	9	80	385.8851205920185	1154.6335323762555	3	385.8851318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TLYNKIYQL_	ENSG00000119457|ENST00000374228|SLC46A2	25.57405402267927	0.5642445186134241	2				NaN	NaN	0	NaN	6769	3421	10187
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10193	28.746	NaN	6781.5	30	0	2779.8	0.106	+			49065	VVKFLQDTL	9	72	531.8137446420074	1061.6129363508146	2	531.8140258789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VVKFLQDTL_	DOCK2|p.M1388Gfs*7|1|0.05|ENSG00000134516|chr5:170050344-170050345|-/AGGATGCTCATTAGAGATTT|frameshift_variant;DOCK2|p.N1321Kfs*10|1|0.37|ENSG00000134516|chr5:170045899-170045900|-/A|frameshift_variant;ENSG00000134516|ENST00000520908|DOCK2;ENSG00000150760|ENST00000623213|DOCK1;nc|ENSG00000150760|Q14185|DOCK1	62.107414245175825	0.1960472003779324	2				NaN	NaN	0	NaN	6770	3421	10187
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10194	28.747	NaN	6427.1	30	0	579.82	0.036	+			24080	LEKFTRSPE	9	75	553.7956231266398	1105.5766933200796	2	553.7962646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LEKFTRSPE_	ENSG00000148120|ENST00000375315|AOPEP;nc|ENSG00000148120|Q8N6M6-2|AOPEP;nc|ENSG00000148120|Q8N6M6-3|AOPEP;nc|ENSG00000148120|Q8N6M6-4|AOPEP	75.04331003522576	0.118981335847003	2				NaN	NaN	0	NaN	6771	3421	10187
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10206	28.774	NaN	28839	30	0	3005.7	0.214	+			25317	LPAREATQF	9	87	516.7784245077789	1031.5422960823578	2	516.7774658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LPAREATQF_	ENSG00000183087|ENST00000327773|GAS6;ENST00000476291.1_1_13:114550749-114566917:-|nuORF;GAS6|p.G150Afs*49|1|0.17|ENSG00000183087|chr13:113839745-113839745|C/-|frameshift_variant;GAS6|p.N106Kfs*13|1|0.39|ENSG00000183087|chr13:113846552-113846553|-/T|frameshift_variant;GAS6|p.R151Pfs*27|1|0.41|ENSG00000183087|chr13:113839744-113839745|-/C|frameshift_variant;nc|ENSG00000183087|Q14393-1|GAS6	96.0336014099291	0.047854655524928534	2				NaN	NaN	0	NaN	6780	3424	10205
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10207	28.777	NaN	13236	30	0	1246.3	0.106	+			26604	LTYEFVKQK	9	77	578.3242573399176	1154.6339617466351	2	578.3243408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LTYEFVKQK_	ENSG00000179222|ENST00000326587|MAGED1;ENST00000494718.5_1_X:51641614-51641740:+|nuORF;MAGED1|p.P628Rfs*18|1|0.09|ENSG00000179222|chrX:51900215-51900215|C/-|frameshift_variant;nc|ENSG00000179222|Q9Y5V3-2|MAGED1	148.6902309647307	0.00717441509122429	2				NaN	NaN	0	NaN	6781	3424	10205
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10208	28.779	NaN	17841	30	0	2264.2	0.106			+	28875	NQAAVQAVTTI	11	90	558.3064907742438	1114.5984286152875	2	558.3068237304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NQAAVQAVTTI_	REV__nc|ENSG858|P60608|ERVFC1-1	91.46909648831856	0.0927605832428752	2				NaN	NaN	0	NaN	6782	3424	10205
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10209	28.781	NaN	10588	30	0	3648.9	0.106	+			30999	QESEARIQQL	10	82	601.3127522871083	1200.6109516410165	2	601.3125610351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QESEARIQQL_	ENSG00000100242|ENST00000689035|SUN2;ENST00000469086.5_1_22:39136824-39138467:-|nuORF;ENST00000477262.5_1_22:39135390-39138407:-|nuORF;nc|ENSG00000100242|Q9UH99-2|SUN2;nc|ENSG00000100242|Q9UH99-3|SUN2	123.20810148215591	0.02279876478776198	2				NaN	NaN	0	NaN	6783	3424	10205
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10210	28.783	NaN	6370.9	30	0	746.02	0.106	+			5699	AVFDGAQVTSK	11	78	561.7931410003806	1121.5717290675611	2	561.7933349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVFDGAQVTSK_	ENSG00000175274|ENST00000525680|TP53I11	68.78561909154949	0.24586362119257035	2				NaN	NaN	0	NaN	6784	3424	10205
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10211	28.785	NaN	8231.4	30	0	734.31	0.106			+	28727	NNQIIYLNI	9	80	552.8074304400408	1103.6003079468815	2	552.8084106445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NNQIIYLNI_	REV__ENSG00000083097|ENST00000349129|DOP1A	56.43379154798735	0.2433427591689151	2				NaN	NaN	0	NaN	6785	3424	10205
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10212	28.786	NaN	5221.9	30	0	912.04	0.034			+	38956	SSQVVPQPV	9	72	470.7571899550871	NaN	0	470.75634765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSQVVPQPV_	REV__ENSG00000155090|ENST00000285407|KLF10;REV__nc|ENSG00000155090|Q13118-2|KLF10	42.396135135203025	0.2590952873412954	2				NaN	NaN	0	NaN	6786	3424	10205
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10223	28.812	NaN	26548	30	0	3814.8	0.214	+			16937	HPNGNITEL	9	77	497.7521074932783	993.4896620533566	2	497.7511291503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HPNGNITEL_	ENSG00000197157|ENST00000354725|SND1;GAS2L3-SND1|1|fusion;SND1|p.A514Qfs*156|1|0.37|ENSG00000197157|chr7:127929195-127929195|A/-|frameshift_variant	90.77665401227738	0.06267569666681755	2				NaN	NaN	0	NaN	6794	3427	10222
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10224	28.815	NaN	29245	30	0	12227	0.106	+			32920	RDYETATL	8	75	484.7377198859068	967.4608868386136	2	484.73760986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RDYETATL_	ENSG00000130402|ENST00000252699|ACTN4;ENST00000588618.5_1_19:39138385-39212431:+|nuORF;nc|ENSG00000130402|O43707-2|ACTN4	82.24051045832904	0.30490469762271794	2				NaN	NaN	0	NaN	6795	3427	10222
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10225	28.817	NaN	26008	30	0	3178.4	0.106	+			38026	SPNSLTLANIV	11	94	564.8165820564709	1127.6186111797417	2	564.8170166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SPNSLTLANIV_	ENST00000477982.2_1_13:77575078-77575330:-|nuORF	117.81106730687013	0.024388665464245545	2				NaN	NaN	0	NaN	6796	3427	10222
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10226	28.819	NaN	15383	30	0	5671.5	0.106				-1	 	0	67	329.2181119139787	656.4216708947574	2	329.2181701660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6797	3427	10222
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10227	28.821	NaN	14923	30	0	7557	0.106			+	47290	VNGLHSKIN	9	72	491.2778597838788	980.5411666345576	2	491.2778015136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VNGLHSKIN_	REV__ENSG00000081154|ENST00000265260|PCNP;REV__nc|ENSG00000081154|Q8WW12-3|PCNP	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	6798	3427	10222
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10228	28.823	NaN	25228	30	0	3777.9	0.106	+			730	AEAYLGKTV	9	90	476.2612074547051	950.5078619762102	2	476.2607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEAYLGKTV_	ENSG00000109971|ENST00000534624|HSPA8;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;ENST00000456928.2_1_12:4206979-4207195:+|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;HSPA8|p.K569Dfs*6|1|0.3|ENSG00000109971|chr11:123058302-123058303|TC/-|frameshift_variant;nc|ENSG00000109971|P11142-2|HSPA8	104.01359247289065	0.03510646158778409	2				NaN	NaN	0	NaN	6799	3427	10222
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10229	28.824	NaN	15228	30	0	1404.8	0.036	+			28120	NAIKESYDY	9	90	551.7560412816783	1101.4975296301566	2	551.7565307617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NAIKESYDY_	EED|p.H305Qfs*14|1|0.09|ENSG00000074266|chr11:86268500-86268501|-/AGACATAC|frameshift_variant;ENSG00000074266|ENST00000263360|EED;ENST00000525244.5_1_11:85956313-85988207:+|nuORF;nc|ENSG00000074266|O75530-2|EED;nc|ENSG00000074266|O75530-3|EED	132.757866228626	0.013877640931359021	2				NaN	NaN	0	NaN	6800	3427	10222
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10241	28.851	NaN	6557.8	30	0	2621.9	0.214				-1	 	0	59	351.2326873147386	700.4508216962772	2	351.2327575683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6809	3430	10240
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10242	28.854	NaN	8247.2	30	0	757.27	0.106	+			20288	KENSPEKFAL	10	75	581.8094784712256	1161.604404009251	2	581.8092651367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KENSPEKFAL_	ENSG00000099956|ENST00000644036|SMARCB1;nc|ENSG00000099956|Q12824-2|SMARCB1	110.54063921016906	0.04639402190081153	2				NaN	NaN	0	NaN	6810	3430	10240
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10243	28.856	NaN	6965.1	30	0	3361.1	0.106	+			35739	SDRSVLIQ	8	66	459.25577068314584	916.4969884330917	2	459.25592041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SDRSVLIQ_	ENSG00000196150|ENST00000417550|ZNF250;nc|ENSG00000196150|P15622|ZNF250	56.72105179125745	0.5342425954139568	2				NaN	NaN	0	NaN	6811	3430	10240
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10244	28.858	NaN	8935.8	30	0	1232.4	0.106	+			47885	VSLGTPIMK	9	79	481.2724389412135	960.5303249492271	2	481.27252197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_VSLGTPIM(Oxidation (M))K_	ECT2|p.K832Rfs*25|1|0.1|ENSG00000114346|chr3:172815693-172815693|A/-|frameshift_variant;ENSG00000114346|ENST00000392692|ECT2;nc|ENSG00000114346|Q9H8V3-2|ECT2;nc|ENSG00000114346|Q9H8V3-3|ECT2;nc|ENSG00000114346|Q9H8V3-4|ECT2	75.04331003522576	0.118981335847003	2				NaN	NaN	0	NaN	6812	3430	10240
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10245	28.86	NaN	13107	30	0	1292.1	0.106			+	27446	MLKQIWEF	8	86	547.7900746629265	1093.5655963926529	2	547.7901611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MLKQIWEF_	REV__ENSG00000007038|ENST00000005995|PRSS21;REV__nc|ENSG00000007038|Q9Y6M0-2|PRSS21;REV__nc|ENSG00000007038|Q9Y6M0-3|PRSS21	53.351449002276354	0.5676011784961348	2				NaN	NaN	0	NaN	6813	3430	10240
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10246	28.862	NaN	15796	30	0	3876.9	0.106	+			11781	FSNGHIKVL	9	95	338.86228842370633	1013.565035871319	3	338.86260986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FSNGHIKVL_	ENSG00000112249|ENST00000369162|ASCC3	30.503639358989545	0.5181749237905803	2				NaN	NaN	0	NaN	6814	3430	10240
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10247	28.863	NaN	12773	30	0	1470	0.036	+			42580	TASSGHYIAY	10	75	535.2514977309941	1068.488442528788	2	535.2516479492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TASSGHYIAY_	ENSG00000077254|ENST00000370794|USP33;nc|ENSG00000077254|Q8TEY7-3|USP33;nc|ENSG00000077254|Q8TEY7|USP33;USP33|p.I935Lfs*3|1|0.1|ENSG00000077254|chr1:77697343-77697343|T/-|frameshift_variant	45.97224482568171	0.49411383603842696	2				NaN	NaN	0	NaN	6815	3430	10240
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10262	28.895	NaN	61215	30	0	7625	0.214	+			50447	YADVGGKQF	9	90	492.7429963436274	983.4714397540548	2	492.742431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YADVGGKQF_	ENSG00000180879|ENST00000370086|SSR4;ENST00000460616.5_1_X:153061851-153063636:+|nuORF;ENST00000485612.5_1_X:153061851-153063885:+|nuORF	162.25246889848123	0.0040893836092247005	2				NaN	NaN	0	NaN	6827	3433	10261
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10263	28.899	NaN	7399.1	30	0	1465.2	0.106			+	-1	ICVMLVGLAF	10	68	374.8727348308303	1121.596375092691	3	374.872802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_IC(Carbamidomethyl (C))VMLVGLAF_	REV__ENSG00000114544|ENST00000360370|SLC41A3;REV__nc|ENSG00000114544|Q96GZ6-2|SLC41A3;REV__nc|ENSG00000114544|Q96GZ6-3|SLC41A3;REV__nc|ENSG00000114544|Q96GZ6-4|SLC41A3;REV__nc|ENSG00000114544|Q96GZ6-5|SLC41A3;REV__nc|ENSG00000114544|Q96GZ6-6|SLC41A3;REV__nc|ENSG00000114544|Q96GZ6-7|SLC41A3;REV__nc|ENSG00000114544|Q96GZ6-8|SLC41A3;REV__nc|ENSG00000114544|Q96GZ6|SLC41A3	31.529811441608018	0.6223461015008678	2				NaN	NaN	0	NaN	6828	3433	10261
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10264	28.901	NaN	4878.2	30	0	886.1	0.106			+	47316	VNYKELLTV	9	77	360.20941893899146	1077.6064274171745	3	360.20941162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VNYKELLTV_	REV__tr|U7SF62|U7SF62_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02344PE=4SV=1	39.252832667884924	0.4290233611298554	2				NaN	NaN	0	NaN	6829	3433	10261
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10265	28.902	NaN	2137.8	30	0	252.54	0.106	+			11752	FSHSVGTSL	9	66	467.73521852014375	933.4558841070875	2	467.73468017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FSHSVGTSL_	ENSG00000188603|ENST00000636147|CLN3;ENST00000564574.5_2_16:28493646-28503072:-|nuORF;ENST00000566083.6_2_16:28493835-28503080:-|nuORF;nc|ENSG00000261832|Q13286-2|CLN3;nc|ENSG00000261832|Q13286-3|CLN3;nc|ENSG00000261832|Q13286-4|CLN3;nc|ENSG00000261832|Q13286-5|CLN3;nc|ENSG00000261832|Q13286-7|CLN3	73.97473282117947	0.12360187025703594	2				NaN	NaN	0	NaN	6830	3433	10261
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10266	28.904	NaN	3523.7	30	0	289.71	0.106	+			18938	IVNGHSEI	8	67	434.7297840695999	867.4450152059998	2	434.7294616699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IVNGHSEI_	ENSG00000175105|ENST00000636215|ZNF654	68.484700416344	0.4195245774506064	2				NaN	NaN	0	NaN	6831	3433	10261
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10267	28.906	NaN	6175.1	30	0	1619.6	0.036	+			37003	SIPLPIRQK	9	75	526.3351873396712	1050.6558217461422	2	526.3350830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SIPLPIRQK_	ENSG00000182168|ENST00000453304|UNC5C;UNC5C|p.Q860Rfs*14|1|0.28|ENSG00000182168|chr4:95170206-95170206|G/-|frameshift_variant	41.42661286455405	0.403525789677298	2				NaN	NaN	0	NaN	6832	3433	10261
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10268	28.907	NaN	5813.6	30	0	1684.4	0.139	+			51336	YSPEGHVL	8	58	451.2244363581471	900.4343197830942	2	451.22393798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YSPEGHVL_	ENSG00000203485|ENST00000392634|INF2;INF2|p.G1056Afs*31|1|0.29|ENSG00000203485|chr14:104714323-104714323|C/-|frameshift_variant;INF2|p.G1212Dfs*19|1|0.9|ENSG00000203485|chr14:104714794-104714810|GGGGCCGGGCCTCAAAG/-|frameshift_variant;INF2|p.P438Lfs*120|1|1.0|ENSG00000203485|chr14:104707576-104707576|C/-|frameshift_variant;INF2|p.P472Qfs*86|1|0.43|ENSG00000203485|chr14:104707676-104707676|C/-|frameshift_variant;INF2|p.V530Wfs*28|3|0.32|ENSG00000203485|chr14:104707848-104707848|C/-|frameshift_variant;nc|ENSG00000203485|Q27J81-2|INF2;nc|ENSG00000203485|Q27J81-3|INF2	50.0245360154114	0.5941082100236891	2				NaN	NaN	0	NaN	6833	3433	10261
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10280	28.934	NaN	33819	30	0	3463	0.182	+			42100	SYISRTNQL	9	88	541.2857831986767	1080.5570134641532	2	541.2860717773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SYISRTNQL_	AHCTF1|p.E1870Kfs*19|1|0.27|ENSG00000153207|chr1:246850426-246850426|T/-|frameshift_variant;AHCTF1|p.G1113Wfs*13|1|0.07|ENSG00000153207|chr1:246867281-246867282|-/A|frameshift_variant;ENSG00000153207|ENST00000648844|AHCTF1;nc|ENSG00000153207|Q8WYP5-2|AHCTF1;nc|ENSG00000153207|Q8WYP5-3|AHCTF1	131.115847015877	0.014647977962315902	2				NaN	NaN	0	NaN	6842	3436	10279
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10281	28.937	NaN	25139	30	0	1838.6	0.106	+			50448	YADVGGKQF	9	77	492.7429963436274	983.4714397540548	2	493.745361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YADVGGKQF_	ENSG00000180879|ENST00000370086|SSR4;ENST00000460616.5_1_X:153061851-153063636:+|nuORF;ENST00000485612.5_1_X:153061851-153063885:+|nuORF	85.16082228582465	0.07850854922700509	2				NaN	NaN	0	NaN	6843	3436	10279
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10282	28.939	NaN	15433	30	0	2008	0.106	+			20028	KEITALAPST	10	78	515.7927438604704	1029.5709347877407	2	515.79296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEITALAPST_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000184009|ENST00000573283|ACTG1;ENST00000415776.1_1_Y:19868883-19869072:-|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000493945.5_1_7:5567381-5567853:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2	85.86182877749512	0.1547657473298402	2				NaN	NaN	0	NaN	6844	3436	10279
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10283	28.941	NaN	4326.1	30	0	578.27	0.106	+			24055	LEHQVRVGF	9	71	362.200920721356	1083.580932764268	3	362.2012939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LEHQVRVGF_	ENSG00000158201|ENST00000289119|ABHD3;ENST00000579875.5_1_18:19244061-19284599:-|nuORF;ENST00000579982.1_1_18:19282269-19284734:-|nuORF;nc|ENSG00000158201|Q8WU67-2|ABHD3	76.7741389293348	0.11149722112137898	2				NaN	NaN	0	NaN	6845	3436	10279
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10284	28.943	NaN	9443.4	30	0	1744.8	0.106	+			23341	KYTEGVQSL	9	71	512.769313795708	1023.5240746582159	2	512.769287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KYTEGVQSL_	ENSG00000092201|ENST00000216297|SUPT16H;ENST00000537175.1_1_12:16552211-16552709:-|nuORF	83.6470233535746	0.08277643980271215	2				NaN	NaN	0	NaN	6846	3436	10279
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10285	28.945	NaN	7595.6	30	0	1269.9	0.106	+			16880	HPHAVNEIAL	10	77	550.7957882958025	1099.5770236584049	2	550.7963256835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HPHAVNEIAL_	ENSG00000157827|ENST00000288670|FMNL2;ENSG00000161791|ENST00000335154|FMNL3;ENST00000492942.1_1_2:153435413-153463948:+|nuORF;FMNL2|p.D377*|1|0.22|ENSG00000157827|chr2:152614911-152614912|-/T|frameshift_variant;FMNL3|p.G383Vfs*11|1|0.37|ENSG00000161791|chr12:49653798-49653798|C/-|frameshift_variant;nc|ENSG00000157827|Q96PY5|FMNL2;nc|ENSG00000161791|Q8IVF7-2|FMNL3;nc|ENSG00000161791|Q8IVF7|FMNL3	41.42661286455405	0.5359995577334734	2				NaN	NaN	0	NaN	6847	3436	10279
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10286	28.946	NaN	9701.3	30	0	908.23	0.038	+			41413	SVMSTVEWNK	10	85	598.7844837904145	1195.5544146476288	2	598.78466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_SVM(Oxidation (M))STVEWNK_	BZW1|p.S325Rfs*19|1|0.04|ENSG00000082153|chr2:200819989-200819990|-/ACAATATAGAA|frameshift_variant;ENSG00000082153|ENST00000409600|BZW1;nc|ENSG00000082153|Q7L1Q6-3|BZW1;nc|ENSG00000082153|Q7L1Q6-4|BZW1	72.2432373244024	0.2589930451692646	2				NaN	NaN	0	NaN	6848	3436	10279
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10298	28.972	NaN	11548	30	0	1729.2	0.214				-1	ASMKKVKSL	9	92	336.5343187755295	NaN	0	336.5345458984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ASM(Oxidation (M))KKVKSL_	ENST00000369426.9_1_1:119575536-119588262:-|nuORF	31.529811441608018	0.3183796599642538	2				NaN	NaN	0	NaN	6857	3439	10297
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10299	28.976	NaN	5961.9	30	0	1067.7	0.106			+	23887	LDILEPKKN	9	79	357.2118817493107	NaN	0	357.21185302734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LDILEPKKN_	REV__ENSG00000006788|ENST00000252172|MYH13;REV__MYH13|p.K1396Nfs*37|1|0.46|ENSG00000006788|chr17:10312751-10312751|T/-|frameshift_variant	17.468008924990375	0.37786057458515737	2				NaN	NaN	0	NaN	6858	3439	10297
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10300	28.978	NaN	7245.8	30	0	1106.1	0.106	+			41243	SVLGQAMEK	9	69	481.7523902926351	961.4902276520702	2	481.7521667480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVLGQAMEK_	CYP51A1|p.L333Wfs*13|1|0.15|ENSG00000001630|chr7:92123208-92123208|A/-|frameshift_variant;ENSG00000001630|ENST00000003100|CYP51A1	93.5975768576971	0.05472259948179787	2				NaN	NaN	0	NaN	6859	3439	10297
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10301	28.98	NaN	10098	30	0	1429.7	0.106				-1	LAMLPCVREF	10	78	597.8041936782641	1193.5938344233282	2	597.8042602539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_LAM(Oxidation (M))LPCVREF_	MIOX|p.W245C|1|0.2|ENSG00000100253|chr22:50489630-50489630|G/T|missense_variant	51.33545320467046	0.4446945571623749	2				NaN	NaN	0	NaN	6860	3439	10297
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10302	28.982	NaN	7714.3	30	0	2249.7	0.106	+			12116	GAFGKPSSL	9	51	432.2348220459417	862.4550911586834	2	432.2344665527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GAFGKPSSL_	ENSG00000099812|ENST00000215582|MISP	101.60071028292904	0.0375685401170269	2				NaN	NaN	0	NaN	6861	3439	10297
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10303	28.984	NaN	7193.6	30	0	638.05	0.106	+			12432	GEASKLQQF	9	82	504.26083141005256	1006.5071098869051	2	504.252685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GEASKLQQF_	ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1	92.23892857375223	0.05855307001735979	2				NaN	NaN	0	NaN	6862	3439	10297
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10304	28.985	NaN	6242.3	30	0	578.51	0.039				-1	 	0	81	632.3320356347074	1262.6495183362147	2	632.3329467773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6863	3439	10297
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10315	29.011	NaN	18914	30	0	4141.1	0.214	+			34080	RSPPPGMGL	9	74	456.2418626152713	910.4691722973427	2	456.2417907714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RSPPPGMGL_	ENSG00000116560|ENST00000357214|SFPQ;nc|ENSG00000116560|P23246-2|SFPQ	82.24051045832904	0.08786059719216216	2				NaN	NaN	0	NaN	6871	3442	10314
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10316	29.015	NaN	17110	30	0	2126.8	0.106			+	37344	SLESLIQEPVS	11	82	601.3194995898264	1200.6244462464526	2	601.3191528320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLESLIQEPVS_	REV__ENST00000606011.1_1_13:96328766-96328880:-|nuORF	99.01295224348159	0.06272769226248746	2				NaN	NaN	0	NaN	6872	3442	10314
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10317	29.017	NaN	16741	30	0	1220.9	0.106	+			12433	GEASKLQQF	9	87	504.26083141005256	1006.5071098869051	2	504.26068115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEASKLQQF_	ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1	157.3448221729694	0.005157168637584854	2				NaN	NaN	0	NaN	6873	3442	10314
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10318	29.019	NaN	5555.2	30	0	1866	0.106	+			23882	LDHLAEKF	8	67	324.84311951705234	NaN	0	324.8431091308594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LDHLAEKF_	ENSG00000072110|ENST00000394419|ACTN1;ENSG00000130402|ENST00000252699|ACTN4;ENST00000588618.5_1_19:39138385-39212431:+|nuORF;nc|ENSG00000072110|P12814-2|ACTN1;nc|ENSG00000072110|P12814-4|ACTN1;nc|ENSG00000072110|P12814|ACTN1;nc|ENSG00000130402|O43707-2|ACTN4	60.97194046774394	1.7418937515398478	2				NaN	NaN	0	NaN	6874	3442	10314
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10319	29.02	NaN	7566.5	30	0	1066.2	0.106	+			8487	EASKYIMQY	9	70	574.7691808854345	1147.5238088376689	2	574.7688598632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_EASKYIM(Oxidation (M))QY_	ENSG00000176658|ENST00000318217|MYO1D	129.68262048586715	0.015338143639892752	2				NaN	NaN	0	NaN	6875	3442	10314
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10320	29.022	NaN	4340.8	30	0	933.4	0.106				-1	NPAAGCWAR	9	65	501.73007420481804	NaN	0	501.7298889160156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_NPAAGC(Carbamidomethyl (C))WAR_	ENST00000503709.1_1_4:2951967-2963118:+|nuORF;ENST00000515194.5_1_4:2951967-2952375:+|nuORF	51.33545320467046	0.19748963086191895	2				NaN	NaN	0	NaN	6876	3442	10314
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10321	29.024	NaN	4731.8	30	0	758.86	0.038	+			4957	ATQTQFFHVK	10	74	603.8173463584714	1205.6201397837426	2	603.8173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATQTQFFHVK_	ENSG00000163564|ENST00000368140|PYHIN1;ENSG00000163565|ENST00000295809|IFI16;ENST00000485134.1_1_1:158911778-158914889:+|nuORF;ENST00000493884.5_1_1:158984458-159022017:+|nuORF;nc|ENSG00000163564|Q6K0P9-2|PYHIN1;nc|ENSG00000163564|Q6K0P9-3|PYHIN1;nc|ENSG00000163564|Q6K0P9-4|PYHIN1;nc|ENSG00000163565|Q16666-2|IFI16;nc|ENSG00000163565|Q16666-3|IFI16;nc|ENSG00000163565|Q16666-6|IFI16;nc|ENSG00000163565|Q16666-8|IFI16	62.166158670854095	0.3461392669251714	2				NaN	NaN	0	NaN	6877	3442	10314
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10333	29.05	NaN	41870	30	0	28042	0.214			+	41058	SVIGMRKLAML	11	70	406.9067696571227	1217.6984795715682	3	406.9065246582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVIGMRKLAML_	REV__ENSG00000081307|ENST00000356232|UBA5;REV__ENST00000464101.2_1_3:132379321-132384968:+|nuORF	25.125986553469783	0.7262400895305658	2				NaN	NaN	0	NaN	6886	3445	10332
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10334	29.054	NaN	25950	30	0	3175.9	0.106				-1	 	0	91	609.8569571328183	1217.6993613324364	2	609.8563842773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6887	3445	10332
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10335	29.056	NaN	11271	30	0	5733.3	0.106	+			46722	VGPGPVRTL	9	62	448.27163525706493	894.5287175809299	2	448.27142333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VGPGPVRTL_	ENSG00000074964|ENST00000361221|ARHGEF10L;ENST00000469726.5_1_1:17942561-18023872:+|nuORF;nc|ENSG00000074964|Q9HCE6-2|ARHGEF10L;nc|ENSG00000074964|Q9HCE6-3|ARHGEF10L;nc|ENSG00000074964|Q9HCE6-4|ARHGEF10L;nc|ENSG00000074964|Q9HCE6-5|ARHGEF10L	49.536043120802724	0.308405419312776	2				NaN	NaN	0	NaN	6888	3445	10332
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10336	29.058	NaN	9367.7	30	0	914.81	0.106	+			3289	ASLQSIIHK	9	81	498.79564049956446	995.5767280659289	2	498.79534912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASLQSIIHK_	ENSG00000095787|ENST00000354911|WAC;nc|ENSG00000095787|Q9BTA9-2|WAC;nc|ENSG00000095787|Q9BTA9-3|WAC;nc|ENSG00000095787|Q9BTA9-5|WAC	131.61620852596164	0.014413238321579053	2				NaN	NaN	0	NaN	6889	3445	10332
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10337	29.06	NaN	11998	30	0	1741.3	0.106	+			38806	SSMTSTMTIGK	11	83	572.2730357909281	1142.5315186486562	2	572.2733764648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSMTSTMTIGK_	ENSG00000131781|ENST00000254090|FMO5	109.82975700811294	0.04036548564786578	2				NaN	NaN	0	NaN	6890	3445	10332
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10338	29.061	NaN	13237	30	0	1710.2	0.106	+			14084	GSLFLRTPK	9	81	509.805740722441	1017.596928511682	2	509.80572509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GSLFLRTPK_	ENSG00000134333|ENST00000422447|LDHA;ENST00000437325.2_1_1:235901419-235901638:+|nuORF;ENST00000494573.6_1_11:18418389-18421097:+|nuORF;LDHA|p.E176Kfs*8|1|0.28|ENSG00000134333|chr11:18402943-18402943|G/-|frameshift_variant;LDHA|p.W227Tfs*16|1|0.06|ENSG00000134333|chr11:18403779-18403780|-/AC|frameshift_variant;nc|ENSG00000134333|P00338-2|LDHA;nc|ENSG00000134333|P00338-3|LDHA;nc|ENSG00000134333|P00338-4|LDHA;nc|ENSG00000134333|P00338-5|LDHA	92.23892857375223	0.05855307001735979	2				NaN	NaN	0	NaN	6891	3445	10332
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10339	29.063	NaN	9980.9	30	0	2665.9	0.035	+			24213	LERMGANSL	9	82	495.75446235843054	989.4943717836611	2	495.7553405761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LERMGANSL_	ENSG00000099783|ENST00000325495|HNRNPM;ENSG00000099783|ENST00000325495|HNRNPM;nc|ENSG00000099783|P52272-2|HNRNPM;nc|ENSG00000099783|P52272-2|HNRNPM	109.43880257439609	0.029570636687953285	2				NaN	NaN	0	NaN	6892	3445	10332
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10354	29.095	NaN	8977.8	30	0	1059.3	0.214	+			6178	AVQLPARFK	9	69	515.3137924552916	1028.6130319773831	2	515.3130493164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVQLPARFK_	ENSG00000241973|ENST00000255882|PI4KA;ENST00000485123.1_1_22:21082055-21083755:-|nuORF;nc|ENSG00000241973|P42356-2|PI4KA	47.95952297671804	0.32689736945648856	2				NaN	NaN	0	NaN	6904	3448	10353
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10355	29.098	NaN	8612.1	30	0	666.52	0.106	+			49643	VYIKHPVSL	9	75	528.3159362596789	1054.6173195861577	2	528.316162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYIKHPVSL_	ENSG00000099341|ENST00000215071|PSMD8;ENST00000592001.5_1_19:38865430-38871817:+|nuORF	104.74654710444128	0.034358562718640136	2				NaN	NaN	0	NaN	6905	3448	10353
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10356	29.1	NaN	6513.3	30	0	2333.6	0.106	+			6179	AVQLPARFK	9	67	343.87814033423547	1028.6125916029064	3	343.8783264160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVQLPARFK_	ENSG00000241973|ENST00000255882|PI4KA;ENST00000485123.1_1_22:21082055-21083755:-|nuORF;nc|ENSG00000241973|P42356-2|PI4KA	31.529811441608018	0.5085848003137583	2				NaN	NaN	0	NaN	6906	3448	10353
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10357	29.102	NaN	11381	30	0	1391.1	0.106	+			49693	VYKPAQNSW	9	80	546.7770195736807	1091.5394862141613	2	546.7781372070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VYKPAQNSW_	ENSG00000120696|ENST00000379483|KBTBD7;ENSG00000165572|ENST00000379485|KBTBD6;KBTBD6|p.C613Afs*34|1|0.51|ENSG00000165572|chr13:41130675-41130675|A/-|frameshift_variant	95.81516180277367	0.04847050768394289	2				NaN	NaN	0	NaN	6907	3448	10353
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10358	29.104	NaN	9795.5	30	0	4128.9	0.106			+	10412	EVGFFVTLHE	10	73	589.2978152407045	1176.581077548209	2	589.2980346679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EVGFFVTLHE_	REV__ENSG00000232030|ENST00000416929|MAGEB6B	42.396135135203025	0.5270658956260207	2				NaN	NaN	0	NaN	6908	3448	10353
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10359	29.106	NaN	5096.2	30	0	1162.4	0.033			+	36760	SHLPAPVM	8	65	426.2254210097843	850.4362890863687	2	426.22589111328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SHLPAPVM_	REV__PPFIA1|p.P16Lfs*24|1|0.32|ENSG00000131626|chr11:70272214-70272214|C/-|frameshift_variant	44.53106598305862	0.628196326904373	2				NaN	NaN	0	NaN	6909	3448	10353
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10360	29.106	NaN	3935.1	30	0	1193.5	0.141	+			14085	GSLFLRTPK	9	46	340.20604990663276	1017.5963203200984	3	340.2062683105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GSLFLRTPK_	ENSG00000134333|ENST00000422447|LDHA;ENST00000437325.2_1_1:235901419-235901638:+|nuORF;ENST00000494573.6_1_11:18418389-18421097:+|nuORF;LDHA|p.E176Kfs*8|1|0.28|ENSG00000134333|chr11:18402943-18402943|G/-|frameshift_variant;LDHA|p.W227Tfs*16|1|0.06|ENSG00000134333|chr11:18403779-18403780|-/AC|frameshift_variant;nc|ENSG00000134333|P00338-2|LDHA;nc|ENSG00000134333|P00338-3|LDHA;nc|ENSG00000134333|P00338-4|LDHA;nc|ENSG00000134333|P00338-5|LDHA	31.529811441608018	0.5085848003137583	2				NaN	NaN	0	NaN	6910	3448	10353
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10372	29.134	NaN	10797	30	0	2274.4	0.214	+			5467	AVAAFQVEK	9	69	481.7688936858701	961.5232344385403	2	481.768798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVAAFQVEK_	ENSG00000185000|ENST00000528718|DGAT1;ENST00000525371.1_1_8:145542007-145542573:-|nuORF;ENST00000531896.5_1_8:145541583-145550314:-|nuORF	101.25262130126117	0.03792372629710479	2				NaN	NaN	0	NaN	6919	3451	10371
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10373	29.138	NaN	5462.5	30	0	1123.7	0.106				-1	 	0	61	351.19626829362596	700.377983654052	2	351.19622802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6920	3451	10371
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10374	29.14	NaN	6293.4	30	0	418.28	0.106	+			41228	SVLEVRTENLK	11	76	644.3668545761722	1286.7191562191442	2	644.3670043945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVLEVRTENLK_	ENSG00000162236|ENST00000294179|STX5;nc|ENSG00000162236|Q13190-2|STX5;nc|ENSG00000162236|Q13190-3|STX5;nc|ENSG00000162236|Q13190-4|STX5	128.3478880297481	0.0041339947484058445	2				NaN	NaN	0	NaN	6921	3451	10371
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10375	29.142	NaN	8384	30	0	890.18	0.106	+			45107	TVIQSTQGMYK	11	79	628.3201556382446	1254.6257583432891	2	628.3213500976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TVIQSTQGMYK_	ENSG00000165434|ENST00000298198|PGM2L1;PGM2L1|p.S149Qfs*22|1|0.29|ENSG00000165434|chr11:74370928-74370928|A/-|frameshift_variant;PGM2L1|p.S299Lfs*19|1|0.24|ENSG00000165434|chr11:74347192-74347192|A/-|frameshift_variant	133.7523857240709	0.0010046400317632145	2				NaN	NaN	0	NaN	6922	3451	10371
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10376	29.143	NaN	11375	30	0	4575	0.106	+			20953	KKDLSLDLL	9	77	348.88096930456334	1043.62107851389	3	348.88031005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KKDLSLDLL_	nc|ENSG00000149443|Q9BR46|SCP2D1-AS1	49.44154591367651	0.3095138337212152	2				NaN	NaN	0	NaN	6923	3451	10371
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10377	29.145	NaN	6496	30	0	655.63	0.106	+			11146	FGGPPPKA	8	68	385.71362171446964	769.4126904957393	2	385.7133483886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FGGPPPKA_	ENST00000484157.5_1_1:155107991-155108063:+|nuORF	35.200714571348534	0.6875396545722289	2				NaN	NaN	0	NaN	6924	3451	10371
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10378	29.147	NaN	10120	30	0	664.6	0.035	+			7943	DSLATVKVVL	10	79	522.8190604432477	1043.6235679532954	2	522.8192138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DSLATVKVVL_	ENSG00000164675|ENST00000324698|IQUB;ENST00000483567.1_1_7:123143235-123152394:-|nuORF;IQUB|p.I180Ffs*8|1|0.51|ENSG00000164675|chr7:123503358-123503358|T/-|frameshift_variant;nc|ENSG00000164675|Q8NA54-2|IQUB	63.42647028704847	0.33467688528802414	2				NaN	NaN	0	NaN	6925	3451	10371
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10390	29.173	NaN	22831	30	0	5101.3	0.214	+			1787	AIFGGFKSK	9	90	477.77375560075365	953.5329582683073	2	477.7740783691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AIFGGFKSK_	ENSG00000248144|ENST00000515683|ADH1C	109.47833844074708	0.029530294723441826	2				NaN	NaN	0	NaN	6934	3454	10389
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10391	29.177	NaN	18179	30	0	1154	0.106	+			36597	SGATIRIFK	9	90	496.79809983020726	991.5816467272145	2	496.7981872558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SGATIRIFK_	ENSG00000100596|ENST00000216484|SPTLC2;ENSG00000172296|ENST00000399002|SPTLC3	120.8684288430529	0.02067403653475984	2				NaN	NaN	0	NaN	6935	3454	10389
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10392	29.179	NaN	30582	30	0	8485.4	0.106	+			36598	SGATIRIFK	9	93	331.5342045830365	991.5807843493096	3	331.5344543457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SGATIRIFK_	ENSG00000100596|ENST00000216484|SPTLC2;ENSG00000172296|ENST00000399002|SPTLC3	87.75429964447693	0.0711966946989736	2				NaN	NaN	0	NaN	6936	3454	10389
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10393	29.181	NaN	35439	30	0	3550.9	0.106	+			28364	NEKVIEHIM	9	93	556.7917780367511	1111.5690031403021	2	556.79296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NEKVIEHIM_	ENSG00000163220|ENST00000368738|S100A9	133.9934435666947	0.013297982075521412	2				NaN	NaN	0	NaN	6937	3454	10389
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10394	29.182	NaN	9476.6	30	0	824.77	0.106	+			38027	SPNSLTLANIV	11	81	564.8165820564709	1127.6186111797417	2	564.8176879882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SPNSLTLANIV_	ENST00000477982.2_1_13:77575078-77575330:-|nuORF	82.7504851949679	0.12944296023181348	2				NaN	NaN	0	NaN	6938	3454	10389
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10395	29.184	NaN	6642.9	30	0	1748.6	0.106	+			28014	MWRSILLL	8	63	363.8744247842191	NaN	0	363.8744812011719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))M(Oxidation (M))WRSILLL_	ENST00000508798.5_1_4:99399848-99399875:-|nuORF	60.29395666154354	1.7418937515398478	2				NaN	NaN	0	NaN	6939	3454	10389
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10396	29.186	NaN	7321.4	30	0	1045.1	0.036	+			3147	ASIAGSSIINK	11	79	530.8041817644802	NaN	0	530.8040771484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASIAGSSIINK_	ENSG00000102780|ENST00000337343|DGKH;ENST00000498255.6_1_13:42772627-42773776:+|nuORF;nc|ENSG00000102780|Q86XP1-2|DGKH;nc|ENSG00000102780|Q86XP1-3|DGKH;nc|ENSG00000102780|Q86XP1-5|DGKH	73.84112541714126	0.11229668172112163	2				NaN	NaN	0	NaN	6940	3454	10389
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10408	29.211	NaN	22952	30	0	6454.3	0.214	+			19046	IYGSSHSW	8	73	468.71465577131755	935.4147586094351	2	468.7137756347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IYGSSHSW_	DUOX1|p.S186N|1|0.29|ENSG00000137857|chr15:45135535-45135535|G/A|missense_variant;ENSG00000137857|ENST00000389037|DUOX1;ENSG00000140279|ENST00000389039|DUOX2;nc|ENSG00000140279|Q9NRD8|DUOX2	101.21157088398209	0.2500103534009131	2				NaN	NaN	0	NaN	6949	3457	10407
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10409	29.215	NaN	11802	30	0	1959.5	0.106	+			36389	SETKKGFYSL	10	89	580.3036096628282	1158.5926663924563	2	580.3035278320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SETKKGFYSL_	ENSG00000155926|ENST00000338087|SLA;nc|ENSG00000155926|Q13239-2|SLA;nc|ENSG00000155926|Q13239-3|SLA;nc|ENSG00000155926|Q13239-5|SLA	114.8945686534367	0.03454040281423369	2				NaN	NaN	0	NaN	6950	3457	10407
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10410	29.217	NaN	8051.2	30	0	1136.8	0.106	+			10445	EVLNQVVL	8	79	457.2714888142708	912.5284246953416	2	457.27105712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EVLNQVVL_	tr|U7SLR8|U7SLR8_FUSNUATP-dependentDNAhelicaseRecGOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01872PE=4SV=1	53.351449002276354	0.5676011784961348	2				NaN	NaN	0	NaN	6951	3457	10407
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10411	29.219	NaN	8256.7	30	0	2183.2	0.106			+	15947	HAGASIPI	8	56	383.21626981362556	764.4179866940511	2	383.21636962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HAGASIPI_	REV__ENSG00000182578|ENST00000675795|CSF1R	37.028477286268924	0.6747514403204248	2				NaN	NaN	0	NaN	6952	3457	10407
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10412	29.221	NaN	9950.1	30	0	1737.3	0.106	+			46438	VERVNEPSI	9	80	521.7803602164471	1041.546167499694	2	521.7802124023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VERVNEPSI_	ENSG00000100342|ENST00000397278|APOL1;nc|ENSG00000100342|O14791-2|APOL1;nc|ENSG00000100342|O14791-3|APOL1	84.81729255234993	0.07947707105691067	2				NaN	NaN	0	NaN	6953	3457	10407
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10413	29.222	NaN	9095.1	30	0	1187.5	0.106	+			10582	EYISKDAPNGK	11	72	611.3098744317977	1220.6051959303952	2	611.3093872070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EYISKDAPNGK_	tr|U7SU07|U7SU07_FUSNUSulfitereductase,subunitCOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01055PE=3SV=1	41.42661286455405	0.5384226294179143	2				NaN	NaN	0	NaN	6954	3457	10407
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10414	29.224	NaN	9370	30	0	1221.5	0.035			+	1492	AFQFQDTF	8	79	502.2288401981031	1002.4431274630062	2	502.2276916503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AFQFQDTF_	REV__ENSG00000120594|ENST00000377252|PLXDC2;REV__nc|ENSG00000120594|Q6UX71-2|PLXDC2	55.50420428727701	0.5462892107279674	2				NaN	NaN	0	NaN	6955	3457	10407
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10425	29.25	NaN	27105	30	0	4985.2	0.214	+			42898	TEHINIHQL	9	91	368.864550409613	1103.571821829039	3	368.8646240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEHINIHQL_	ENSG00000180353|ENST00000314583|HCLS1;ENST00000481314.5_1_3:121363541-121379717:-|nuORF;ENST00000487290.5_1_3:121363549-121379717:-|nuORF;nc|ENSG00000180353|P14317-2|HCLS1	108.08749611321984	0.03094949498378333	2				NaN	NaN	0	NaN	6963	3460	10424
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10426	29.254	NaN	12518	30	0	2127.4	0.106	+			22389	KTIIFVETK	9	78	539.82915614248	1077.6437593517599	2	539.8291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTIIFVETK_	ENSG00000100201|ENST00000403230|DDX17;ENST00000216019.11_1_22:38888049-38902242:-|nuORF;ENST00000432525.5_1_22:38886367-38903636:-|nuORF;ENST00000497196.5_1_22:38889517-38891019:-|nuORF;nc|ENSG00000100201|Q92841-1|DDX17;nc|ENSG00000100201|Q92841-2|DDX17;nc|ENSG00000100201|Q92841-3|DDX17	142.36107225718385	0.009372392051035914	2				NaN	NaN	0	NaN	6964	3460	10424
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10427	29.256	NaN	5807.9	30	0	994.48	0.106			+	46633	VGATTGVLP	9	59	407.73760028223114	813.4606476312623	2	407.7369689941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VGATTGVLP_	REV__ENSG00000132517|ENST00000254853|SLC52A1;REV__ENST00000573674.1_1_17:4936254-4937771:-|nuORF;REV__ENST00000575919.1_1_17:4936254-4936696:-|nuORF	55.50420428727701	0.2510918378945873	2				NaN	NaN	0	NaN	6965	3460	10424
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10428	29.257	NaN	14442	30	0	2192.1	0.106	+			14592	GTGALILQK	9	81	450.779169074407	899.543785215614	2	450.7789001464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTGALILQK_	ENSG00000149418|ENST00000278742|ST14	131.03138772384656	0.014687601201650916	2				NaN	NaN	0	NaN	6966	3460	10424
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10429	29.259	NaN	11111	30	0	1352	0.106	+			42899	TEHINIHQL	9	85	552.7942487793928	1103.5739446255855	2	552.794189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TEHINIHQL_	ENSG00000180353|ENST00000314583|HCLS1;ENST00000481314.5_1_3:121363541-121379717:-|nuORF;ENST00000487290.5_1_3:121363549-121379717:-|nuORF;nc|ENSG00000180353|P14317-2|HCLS1	115.49404669440601	0.023927554121326553	2				NaN	NaN	0	NaN	6967	3460	10424
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10430	29.261	NaN	4706.4	30	0	520.13	0.106			+	2693	AQNTVYSSL	9	72	491.74556505899164	981.4765771847833	2	491.7452697753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AQNTVYSSL_	REV__TOX4|p.A352T|1|0.31|ENSG00000092203|chr14:21492670-21492670|G/A|missense_variant	52.936696900407355	0.27249468807391813	2				NaN	NaN	0	NaN	6968	3460	10424
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10431	29.263	NaN	5700.9	30	0	2333.7	0.033	+			47752	VSGPNVAHL	9	51	447.24524748252975	892.4759420318595	2	447.2444152832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VSGPNVAHL_	ENSG00000048707|ENST00000620676|VPS13D;nc|ENSG00000048707|Q5THJ4-2|VPS13D;VPS13D|p.K3964Nfs*34|1|0.09|ENSG00000048707|chr1:12403831-12403831|A/-|frameshift_variant	44.116797842482775	0.37197099687881774	2				NaN	NaN	0	NaN	6969	3460	10424
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10444	29.29	NaN	33221	30	0	3130.4	0.214	+			49659	VYISEHEHF	9	90	580.7724245086647	1159.5302960841293	2	580.7723388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYISEHEHF_	ENSG00000104853|ENST00000337392|CLPTM1;nc|ENSG00000104853|O96005-3|CLPTM1;nc|ENSG00000104853|O96005-4|CLPTM1	139.97047562133406	0.010493916756945389	2				NaN	NaN	0	NaN	6979	3463	10443
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10445	29.294	NaN	11813	30	0	3213.3	0.106	+			14023	GSGAFGTVYK	10	79	493.75071574346697	985.486878553734	2	493.7505187988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSGAFGTVYK_	ENSG00000141736|ENST00000269571|ERBB2;ENSG00000146648|ENST00000275493|EGFR;ENSG00000178568|ENST00000342788|ERBB4;ENST00000484594.5_1_2:212426591-213403254:-|nuORF;ENST00000583038.5_1_17:37872360-37881463:+|nuORF;ERBB4|p.H801Mfs*27|1|0.39|ENSG00000178568|chr2:211561989-211561989|G/-|frameshift_variant;ERBB4|p.N1177Mfs*27|1|0.33|ENSG00000178568|chr2:211384012-211384012|T/-|frameshift_variant;nc|ENSG00000141736|P04626-2|ERBB2;nc|ENSG00000141736|P04626-3|ERBB2;nc|ENSG00000141736|P04626-4|ERBB2;nc|ENSG00000141736|P04626-5|ERBB2;nc|ENSG00000141736|P04626-6|ERBB2;nc|ENSG00000178568|Q15303-2|ERBB4;nc|ENSG00000178568|Q15303-3|ERBB4;nc|ENSG00000178568|Q15303-4|ERBB4	106.68306549817024	0.05784995512091477	2				NaN	NaN	0	NaN	6980	3463	10443
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10446	29.296	NaN	8187.2	30	0	4172.7	0.106	+			38902	SSPLSKEL	8	60	430.73993712599304	859.4653213187861	2	430.7395935058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSPLSKEL_	ENSG00000037241|ENST00000265100|RPL26L1;ENSG00000161970|ENST00000648839|RPL26;ENST00000451325.1_1_10:5346696-5346741:-|nuORF;ENST00000578115.1_1_17:8285406-8285628:-|nuORF;ENST00000602923.1_1_11:2356544-2356979:-|nuORF	71.87747018426188	0.391254423828572	2				NaN	NaN	0	NaN	6981	3463	10443
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10447	29.298	NaN	8820.2	30	0	2050	0.106	+			19147	IYNRSQPVL	9	72	545.3063657686434	1088.5981786040868	2	545.306396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IYNRSQPVL_	ENSG00000197142|ENST00000354655|ACSL5;ENST00000496328.1_1_10:114181742-114186129:+|nuORF;nc|ENSG00000197142|Q9ULC5-3|ACSL5;nc|ENSG00000197142|Q9ULC5-4|ACSL5	90.36981228632155	0.0638227155548745	2				NaN	NaN	0	NaN	6982	3463	10443
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10448	29.299	NaN	7873	30	0	813.21	0.106	+			50935	YGYGHESEL	9	72	527.7278318405555	NaN	0	527.7276611328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YGYGHESEL_	ENSG00000173933|ENST00000310092|RBM4;nc|ENSG00000239306|Q96PK6-5|RBM14	94.00642277110589	0.0335199496031268	2				NaN	NaN	0	NaN	6983	3463	10443
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10449	29.301	NaN	8140.7	30	0	943.63	0.106	+			24222	LESDNNTAL	9	76	488.73304332952137	975.4515337258428	2	488.7327880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LESDNNTAL_	ENSG00000130726|ENST00000253024|TRIM28;ENST00000601150.5_1_19:59059168-59060232:+|nuORF;nc|ENSG00000130726|Q13263-2|TRIM28	54.722347961057174	0.257609425301511	2				NaN	NaN	0	NaN	6984	3463	10443
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10450	29.303	NaN	5487.8	30	0	1293.1	0.036	+			9112	EGKVLGILGH	10	65	341.53761092033074	1021.5910033611922	3	341.5377502441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EGKVLGILGH_	tr|U7STE9|U7STE9_FUSNUD-3-phosphoglyceratedehydrogenaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01033PE=3SV=1	28.081489160057373	0.6505064946289502	2				NaN	NaN	0	NaN	6985	3463	10443
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10462	29.328	NaN	14782	30	0	2285.7	0.214	+			20017	KEILGTAQSV	10	81	523.2983370370966	1044.5821211409932	2	523.2982177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEILGTAQSV_	ENSG00000197958|ENST00000361436|RPL12;ENST00000460355.1_1_2:204055847-204055997:+|nuORF;nc|ENSG00000197958|P30050-2|RPL12	89.56079334093651	0.1335884292564383	2				NaN	NaN	0	NaN	6994	3466	10461
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10463	29.332	NaN	7692.9	30	0	1480.2	0.106				-1	 	0	71	336.53411418053076	1006.5805131417924	3	336.5342712402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	6995	3466	10461
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10464	29.334	NaN	8656.7	30	0	925.3	0.106	+			51377	YTLDQTYAK	9	81	551.7744858846066	1101.5344188360132	2	551.7747802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YTLDQTYAK_	ENSG00000198804|ENST00000361624|MT-CO1;ENST00000441633.2_1_X:125606231-125606297:+|nuORF	106.68306549817024	0.032382560583716295	2				NaN	NaN	0	NaN	6996	3466	10461
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10465	29.335	NaN	5159.9	30	0	785.5	0.106	+			23115	KVVNPLFEK	9	78	537.3216747436612	1072.6287965541223	2	537.3218383789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KVVNPLFEK_	ENSG00000148303|ENST00000323345|RPL7A;ENST00000416120.1_1_6:64259201-64259360:-|nuORF;ENST00000424041.1_1_20:36073469-36073910:-|nuORF;ENST00000434317.1_1_7:102395625-102396051:+|nuORF;ENST00000463740.5_1_9:136215098-136217195:+|nuORF;ENST00000468834.1_1_10:33346560-33347304:-|nuORF;ENST00000486157.1_1_5:78825151-78825526:+|nuORF	56.632244143249146	0.24168844994051353	2				NaN	NaN	0	NaN	6997	3466	10461
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10466	29.337	NaN	7921.1	30	0	1069.2	0.106			+	9046	EGFVCRWPT	9	75	547.7598730275284	1093.5051931218568	2	548.7723388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EGFVCRWPT_	REV__ENST00000488164.5_1_9:74978812-74978980:-|nuORF	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	6998	3466	10461
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10467	29.339	NaN	8588.1	30	0	1058.7	0.106	+			49787	VYSCDQERQ	9	73	592.7517469498534	1183.4889409665068	2	592.7514038085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_VYSC(Carbamidomethyl (C))DQERQ_	ENSG00000198732|ENST00000361956|SMOC1;nc|ENSG00000198732|Q9H4F8|SMOC1	71.87747018426188	0.13267044672804276	2				NaN	NaN	0	NaN	6999	3466	10461
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10468	29.341	NaN	8312.7	30	0	2075.9	0.037				-1	AYVHMVTHF	9	76	374.17937917449217	1119.5163081236765	3	374.1795959472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_AYVHM(Oxidation (M))VTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	34.172542307311794	0.4838870758800184	2				NaN	NaN	0	NaN	7000	3466	10461
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10482	29.37	NaN	9362.8	30	0	1479.4	0.214	+			27075	MAHSFGESY	9	68	514.7108042438786	1027.407055554557	2	514.710693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MAHSFGESY_	ENSG00000141524|ENST00000590602|TMC6;ENST00000588087.5_1_17:76116732-76122925:-|nuORF;nc|ENSG00000141524|Q7Z403-2|TMC6;nc|ENSG00000141524|Q7Z403-3|TMC6;nc|ENSG00000141524|Q7Z403-4|TMC6;TMC6|p.Y488Tfs*67|1|0.39|ENSG00000141524|chr17:78121087-78121087|G/-|frameshift_variant	94.00642277110589	0.05356993013874309	2				NaN	NaN	0	NaN	7011	3469	10481
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10483	29.374	NaN	5814.7	30	0	849.2	0.106	+			34081	RSPPPGMGL	9	64	456.2418626152713	910.4691722973427	2	456.2418212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RSPPPGMGL_	ENSG00000116560|ENST00000357214|SFPQ;nc|ENSG00000116560|P23246-2|SFPQ	82.24051045832904	0.08786059719216216	2				NaN	NaN	0	NaN	7012	3469	10481
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10484	29.376	NaN	8996.2	30	0	2125.7	0.106	+			17858	IFSQANTPL	9	70	495.7666966842289	989.5188404352579	2	495.7660217285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IFSQANTPL_	ENSG00000164398|ENST00000651883|ACSL6;nc|ENSG00000164398|Q9UKU0-2|ACSL6;nc|ENSG00000164398|Q9UKU0-3|ACSL6;nc|ENSG00000164398|Q9UKU0-5|ACSL6;nc|ENSG00000164398|Q9UKU0-6|ACSL6;nc|ENSG00000164398|Q9UKU0-7|ACSL6;nc|ENSG00000164398|Q9UKU0-8|ACSL6;nc|ENSG00000164398|Q9UKU0-9|ACSL6;nc|ENSG00000164398|Q9UKU0|ACSL6	74.25504064058377	0.12238981753128622	2				NaN	NaN	0	NaN	7013	3469	10481
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10485	29.378	NaN	5949.5	30	0	832.45	0.106	+			6547	AYHNSPAYL	9	69	518.2487817948088	1034.4830106564175	2	518.2481689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AYHNSPAYL_	chr17:40628975-40630714|474|22.42|0.3|6.23|-|ENST00000644527|SMARCE1,SMARCE1;ENSG00000073584|ENST00000348513|SMARCE1;ENST00000469334.5_1_17:38788437-38802054:-|nuORF;ENST00000493660.5_1_17:38792069-38802054:-|nuORF;nc|ENSG00000073584|Q969G3-2|SMARCE1;nc|ENSG00000073584|Q969G3-3|SMARCE1;nc|ENSG00000073584|Q969G3-4|SMARCE1;nc|ENSG00000073584|Q969G3-5|SMARCE1;nc|ENSG00000073584|Q969G3-6|SMARCE1	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	7014	3469	10481
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10486	29.38	NaN	7292.8	30	0	1460.8	0.106	+			34021	RSKYEADAI	9	65	526.7726411046247	1051.5307292760492	2	526.7725219726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RSKYEADAI_	ENSG00000078814|ENST00000262873|MYH7B;nc|ENSG00000078814|A7E2Y1|MYH7B	67.49366992349736	0.1516260258713357	2				NaN	NaN	0	NaN	7015	3469	10481
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10487	29.382	NaN	3774.9	30	0	256.95	0.034			+	8004	DTIWVPVL	8	71	471.76621233799773	NaN	0	471.7659912109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DTIWVPVL_	REV__ENSG00000108389|ENST00000682306|MTMR4;REV__ENST00000580983.1_1_17:56585520-56588860:-|nuORF;REV__MTMR4|p.F1143Lfs*14|1|0.15|ENSG00000108389|chr17:58491822-58491823|-/T|frameshift_variant;REV__nc|ENSG00000108389|Q9NYA4|MTMR4	52.29916861842294	1.7418937515398478	2				NaN	NaN	0	NaN	7016	3469	10481
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10488	29.382	NaN	7193.1	30	0	581.97	0.143			+	9889	EQLHTSIGSDI	11	78	600.2994386127249	1198.5843242922497	2	600.2989501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EQLHTSIGSDI_	REV__ENSG00000054654|ENST00000555002|SYNE2;REV__nc|ENSG00000054654|Q8WXH0|SYNE2;REV__SYNE2|p.A5240Qfs*5|1|0.07|ENSG00000054654|chr14:64152639-64152639|G/-|frameshift_variant;REV__SYNE2|p.D3074Ffs*8|1|0.07|ENSG00000054654|chr14:64053132-64053133|-/TTTCTTTTTCAAATACTTG|frameshift_variant;REV__SYNE2|p.F4992Lfs*13|1|0.39|ENSG00000054654|chr14:64140067-64140067|T/-|frameshift_variant;REV__SYNE2|p.L5308Ifs*18|1|0.12|ENSG00000054654|chr14:64158750-64158751|GG/-|frameshift_variant;REV__SYNE2|p.S6651Rfs*83|1|0.29|ENSG00000054654|chr14:64220596-64220597|-/G|frameshift_variant	29.170058357718403	0.683821074385409	2				NaN	NaN	0	NaN	7017	3469	10481
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10501	29.411	NaN	21460	30	0	4386.2	0.214				-1	MIPERSEI	8	80	495.74881490995824	989.4830768867165	2	495.7480773925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))IPERSEI_	SAMD9L|p.N103Ifs*35|1|0.09|ENSG00000177409|chr7:93135669-93135669|C/-|frameshift_variant	69.6276240434122	0.4100012001731381	2				NaN	NaN	0	NaN	7027	3472	10500
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10502	29.415	NaN	33470	30	0	5330.8	0.106	+			36908	SIIETLRQK	9	95	544.3273148197213	1086.6400767062426	2	544.32763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SIIETLRQK_	ENSG00000080824|ENST00000216281|HSP90AA1;ENST00000436135.1_1_1:158495283-158495625:+|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1	118.74307786436346	0.02196067127630568	2				NaN	NaN	0	NaN	7028	3472	10500
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10503	29.417	NaN	19435	30	0	3073.4	0.106	+			14784	GTLASSFAR	9	70	455.24295791805554	908.4713629029111	2	455.2428283691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTLASSFAR_	ENST00000563117.5_1_16:20817227-20817782:-|nuORF;ENST00000565884.5_1_16:20817227-20817407:-|nuORF	158.07458414430337	0.004987072822166904	2				NaN	NaN	0	NaN	7029	3472	10500
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10504	29.419	NaN	20258	30	0	3735.7	0.106	+			32601	QYLEQSSKL	9	82	548.2879958948952	1094.5614388565903	2	548.2881469726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QYLEQSSKL_	CSTF3|p.K439Nfs*33|4|0.35|ENSG00000176102|chr11:33096364-33096364|T/-|frameshift_variant;ENSG00000176102|ENST00000323959|CSTF3	109.47833844074708	0.029530294723441826	2				NaN	NaN	0	NaN	7030	3472	10500
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10505	29.42	NaN	14126	30	0	1417.2	0.106	+			36140	SEKSLENETL	10	87	575.285704074416	1148.556855215632	2	575.2857666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SEKSLENETL_	ENSG00000063046|ENST00000262056|EIF4B;nc|ENSG00000063046|P23588-2|EIF4B	139.38205640894643	0.010918844784185366	2				NaN	NaN	0	NaN	7031	3472	10500
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10506	29.422	NaN	9151.4	30	0	560.15	0.106	+			36128	SEKQLIQRL	9	75	557.8327312668671	1113.650909600534	2	557.8330688476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SEKQLIQRL_	ENSG00000165219|ENST00000297933|GAPVD1;GAPVD1|p.S186Ffs*2|1|0.33|ENSG00000165219|chr9:125302347-125302348|-/T|frameshift_variant;nc|ENSG00000165219|Q14C86-3|GAPVD1;nc|ENSG00000165219|Q14C86-4|GAPVD1;nc|ENSG00000165219|Q14C86-5|GAPVD1;nc|ENSG00000165219|Q14C86-6|GAPVD1;nc|ENSG00000165219|Q14C86|GAPVD1	86.88156770896713	0.07365720931774442	2				NaN	NaN	0	NaN	7032	3472	10500
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10507	29.424	NaN	7155.3	30	0	938.23	0.035			+	-1	ASFIAVCVI	9	65	490.26772783049694	978.5209027277939	2	490.2676696777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_ASFIAVC(Carbamidomethyl (C))VI_	REV__ENSG00000140279|ENST00000389039|DUOX2;REV__nc|ENSG00000140279|Q9NRD8|DUOX2	50.0245360154114	0.3026755932229825	2				NaN	NaN	0	NaN	7033	3472	10500
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10518	29.45	NaN	73862	30	0	13607	0.214			+	13152	GGPWSLLD	8	76	422.7138855663234	843.4132181994469	2	422.7135314941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GGPWSLLD_	REV__ENST00000267984.3_1_15:81293492-81293675:+|nuORF	42.47446043378293	0.6409579893742323	2				NaN	NaN	0	NaN	7041	3475	10517
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10519	29.454	NaN	70489	30	0	10706	0.106	+			50118	WHNDNKTF	8	94	531.2432648527287	1060.4719767722572	2	531.2432861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WHNDNKTF_	ENSG00000166165|ENST00000348956|CKB	85.35947970620816	0.2915182781752196	2				NaN	NaN	0	NaN	7042	3475	10517
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10520	29.456	NaN	27981	30	0	12480	0.106	+			16820	HPDQAQAIL	9	76	496.7615861551831	991.5086193771663	2	496.7613525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HPDQAQAIL_	ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1	62.107414245175825	0.1960472003779324	2				NaN	NaN	0	NaN	7043	3475	10517
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10521	29.457	NaN	16801	30	0	3562.7	0.106	+			48216	VTATQLIQK	9	83	501.3031251319344	1000.5916973306688	2	501.3030700683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTATQLIQK_	ENSG00000198589|ENST00000651943|LRBA;LRBA|p.L2590*|1|0.41|ENSG00000198589|chr4:150310342-150310342|A/-|frameshift_variant;LRBA|p.T2011Qfs*11|1|0.19|ENSG00000198589|chr4:150599022-150599022|T/-|frameshift_variant;nc|ENSG00000198589|P50851-2|LRBA;nc|ENSG00000198589|P50851|LRBA	145.15565482312357	0.00806134135205793	2				NaN	NaN	0	NaN	7044	3475	10517
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10522	29.459	NaN	13684	30	0	2398.7	0.106			+	10337	ETTHVQIQ	8	63	478.245663119271	954.476773305342	2	478.2455749511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ETTHVQIQ_	REV__DYNC2H1|p.F2761Lfs*20|1|0.09|ENSG00000187240|chr11:103203742-103203742|T/-|frameshift_variant;REV__DYNC2H1|p.L4021Wfs*5|1|0.3|ENSG00000187240|chr11:103358262-103358262|T/-|frameshift_variant;REV__DYNC2H1|p.P3966Hfs*44|1|0.22|ENSG00000187240|chr11:103321194-103321194|T/-|frameshift_variant;REV__ENSG00000187240|ENST00000375735|DYNC2H1;REV__nc|ENSG00000187240|Q8NCM8-2|DYNC2H1	44.116797842482775	0.6307669463330267	2				NaN	NaN	0	NaN	7045	3475	10517
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10523	29.461	NaN	9945	30	0	3377.2	0.106			+	12168	GALGWGLSI	9	67	437.24296572923714	NaN	0	437.2428894042969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GALGWGLSI_	REV__tr|U7T2T6|U7T2T6_FUSNUMATEfamilymultidrugresistanceproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00453PE=4SV=1	79.9392285194092	0.07159198198769286	2				NaN	NaN	0	NaN	7046	3475	10517
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10524	29.463	NaN	9439.8	30	0	1948.9	0.035	+			17027	HPVKKEPAE	9	74	517.7847968302207	1033.5550407272412	2	517.7853393554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HPVKKEPAE_	ENSG00000179588|ENST00000319555|ZFPM1	61.691277971877994	0.19951612995419254	2				NaN	NaN	0	NaN	7047	3475	10517
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10537	29.49	NaN	109640	30	0	18219	0.177	+			3822	ATAIGMPVEK	10	92	508.77617065151827	NaN	0	508.7757873535156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATAIGMPVEK_	ENSG00000109736|ENST00000355443|MFSD10;ENST00000509676.1_1_4:2934766-2935650:-|nuORF;MFSD10|p.S111Gfs*48|1|0.44|ENSG00000109736|chr4:2933125-2933147|GGGCGCCTCCCCAAGCAGTCAGA/-|frameshift_variant	109.43880257439609	0.012705359521079733	2				NaN	NaN	0	NaN	7057	3478	10536
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10538	29.493	NaN	8841.8	30	0	1226.5	0.106	+			25762	LSAGSTPRI	9	74	451.25882874025456	900.5031045473091	2	451.2583923339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSAGSTPRI_	DYNC1H1|p.W4201Gfs*43|1|0.42|ENSG00000197102|chr14:102043958-102043958|G/-|frameshift_variant;ENSG00000197102|ENST00000360184|DYNC1H1	80.45461616416974	0.09558281504443908	2				NaN	NaN	0	NaN	7058	3478	10536
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10539	29.495	NaN	12161	30	0	3663	0.106				-1	EMHIKAIQI	9	91	366.869802192737	1097.587577178411	3	366.8695983886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_EM(Oxidation (M))HIKAIQI_	ENSG00000062725|ENST00000083182|APPBP2	67.49366992349736	0.1516260258713357	2				NaN	NaN	0	NaN	7059	3478	10536
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10540	29.497	NaN	8554.8	30	0	1269.7	0.106	+			49620	VYHHLVETL	9	78	555.8005177297218	1109.5864825262436	2	555.8009643554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VYHHLVETL_	ENSG00000099998|ENST00000327365|GGT5;nc|ENSG00000099998|P36269-2|GGT5;nc|ENSG00000099998|P36269-3|GGT5	88.64286706044652	0.06869153472052109	2				NaN	NaN	0	NaN	7060	3478	10536
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10541	29.499	NaN	6860.9	30	0	2049.5	0.106	+			45287	TVRFNVLK	8	82	326.20263180224043	975.5860660069213	3	326.2026672363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TVRFNVLK_	ENSG00000142534|ENST00000270625|RPS11	71.29570347882199	0.39610197767395533	2				NaN	NaN	0	NaN	7061	3478	10536
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10542	29.501	NaN	10464	30	0	3280	0.106	+			8526	EAVASRDLS	9	78	474.24346453712235	946.4723761410447	2	474.2430419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EAVASRDLS_	ENSG00000135052|ENST00000388712|GOLM1;nc|ENSG00000135052|Q8NBJ4-2|GOLM1	47.657333605630114	0.33044192980041115	2				NaN	NaN	0	NaN	7062	3478	10536
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10543	29.502	NaN	11791	30	0	1438.7	0.036	+			16995	HPSLQPEEY	9	75	550.256695164229	1098.4988373952579	2	550.2569580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HPSLQPEEY_	ENSG00000135506|ENST00000315970|OS9;ENST00000549307.5_1_12:58089922-58109758:+|nuORF;ENST00000552787.5_1_12:58089581-58109758:+|nuORF;nc|ENSG00000135506|Q13438-2|OS9;nc|ENSG00000135506|Q13438-3|OS9;nc|ENSG00000135506|Q13438-4|OS9;nc|ENSG00000135506|Q13438-5|OS9;nc|ENSG00000135506|Q13438-6|OS9;nc|ENSG00000135506|Q13438-7|OS9;nc|ENSG00000135506|Q13438-8|OS9	80.45461616416974	0.09558281504443908	2				NaN	NaN	0	NaN	7063	3478	10536
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10559	29.534	NaN	29103	30	0	5067.5	0.214	+			15606	GVIVHIIEK	9	94	504.31613287849973	1006.6177128237995	2	504.3164367675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVIVHIIEK_	ENSG00000277791|ENST00000619426|PSMB3	104.74654710444128	0.034358562718640136	2				NaN	NaN	0	NaN	7076	3481	10558
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10560	29.538	NaN	26956	30	0	2887.4	0.106	+			1620	AGMALGIQK	9	88	444.75178800427324	887.4890230753465	2	444.75238037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AGMALGIQK_	ENSG00000174851|ENST00000376901|YIF1A	170.31369407433692	0.002713371642900501	2				NaN	NaN	0	NaN	7077	3481	10558
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10561	29.54	NaN	12435	30	0	1706.7	0.106	+			43020	TEKSPEVTL	9	89	502.26934886186444	1002.5241447905289	2	502.26922607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TEKSPEVTL_	ENSG00000096996|ENST00000593993|IL12RB1;IL12RB1|p.P237Hfs*5|1|0.35|ENSG00000096996|chr19:18073590-18073590|G/-|frameshift_variant;IL12RB1|p.Y481Lfs*8|1|0.07|ENSG00000096996|chr19:18066583-18066584|-/A|frameshift_variant;nc|ENSG00000096996|P42701-2|IL12RB1;nc|ENSG00000096996|P42701-3|IL12RB1	85.86182877749512	0.07653218437724067	2				NaN	NaN	0	NaN	7078	3481	10558
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10562	29.542	NaN	12305	30	0	3960.3	0.106			+	31976	QRAMDVPI	8	69	465.24810203518626	928.4816511371725	2	465.2480773925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QRAMDVPI_	REV__TBC1D10B|p.V327M|1|0.17|ENSG00000169221|chr16:30365572-30365572|C/T|missense_variant	30.503639358989545	0.7238069182250283	2				NaN	NaN	0	NaN	7079	3481	10558
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10563	29.544	NaN	16128	30	0	1503.9	0.106			+	7087	CVQRNNNK	8	89	516.7556552763	1031.4967576194	2	516.7557983398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_C(Carbamidomethyl (C))VQRNNNK_	REV__ENSG00000107562|ENST00000343575|CXCL12;REV__ENST00000496375.1_1_10:44874083-44881535:-|nuORF;REV__nc|ENSG00000107562|P48061-3|CXCL12;REV__nc|ENSG00000107562|P48061-4|CXCL12;REV__nc|ENSG00000107562|P48061-5|CXCL12;REV__nc|ENSG00000107562|P48061-6|CXCL12;REV__nc|ENSG00000107562|P48061|CXCL12	101.21157088398209	0.2500103534009131	2				NaN	NaN	0	NaN	7080	3481	10558
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10564	29.545	NaN	11421	30	0	2108.9	0.106	+			11331	FLDEKTHEL	9	79	566.2881061334651	1130.5616593337302	2	566.2883911132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FLDEKTHEL_	ENSG00000129317|ENST00000344862|PUS7L;PUS7L|p.K220*|1|0.31|ENSG00000129317|chr12:43754588-43754589|-/A|frameshift_variant	65.46538089061403	0.16805504838372562	2				NaN	NaN	0	NaN	7081	3481	10558
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10565	29.547	NaN	9764.2	30	0	1547.5	0.035			+	50165	WLAMFGVTD	9	69	520.2479192060821	1038.481285478964	2	520.7533569335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_WLAMFGVTD_	REV__ENSG00000015520|ENST00000381160|NPC1L1;REV__nc|ENSG00000015520|Q9UHC9-2|NPC1L1;REV__nc|ENSG00000015520|Q9UHC9-4|NPC1L1;REV__nc|ENSG00000015520|Q9UHC9|NPC1L1	50.0245360154114	0.3026755932229825	2				NaN	NaN	0	NaN	7082	3481	10558
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10579	29.577	NaN	48143	30	0	5276.6	0.214	+			38579	SSFSGLLRK	9	101	497.78743462536926	993.5603163175385	2	497.7874450683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSFSGLLRK_	ENSG00000162783|ENST00000367577|IER5	132.757866228626	0.013877640931359021	2				NaN	NaN	0	NaN	7093	3484	10578
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10580	29.581	NaN	14902	30	0	1205.5	0.106	+			42776	TEAETIQKL	9	77	516.782201332097	1031.5498497309939	2	516.7821044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEAETIQKL_	ENSG00000138768|ENST00000514213|USO1;nc|ENSG00000138768|O60763-2|USO1;USO1|p.I920Sfs*9|1|0.08|ENSG00000138768|chr4:75812332-75812333|-/GAGCTTT|frameshift_variant;USO1|p.K251*|2|0.26|ENSG00000138768|chr4:75782746-75782747|-/T|frameshift_variant;USO1|p.K919Tfs*8|1|0.08|ENSG00000138768|chr4:75812331-75812332|-/C|frameshift_variant	101.25262130126117	0.03792372629710479	2				NaN	NaN	0	NaN	7094	3484	10578
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10581	29.583	NaN	6682	30	0	1284.1	0.106	+			7927	DSGRYGLVV	9	70	483.2560406764057	964.4975284196114	2	483.25592041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DSGRYGLVV_	MYOM1|p.K1643R|1|0.41|ENSG00000101605|chr18:3067392-3067392|T/C|missense_variant	44.377184641726394	0.36891676396732553	2				NaN	NaN	0	NaN	7095	3484	10578
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10582	29.584	NaN	9220.1	30	0	1046.7	0.106			+	29753	PHSCFMSEL	9	72	525.722464810612	1049.430376688024	2	525.7227783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PHSCFMSEL_	REV__ENSG00000196584|ENST00000359321|XRCC2	45.9519527083369	0.35044536499095585	2				NaN	NaN	0	NaN	7096	3484	10578
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10583	29.586	NaN	8342.9	30	0	1695.9	0.106	+			50252	WPSIWYST	8	71	520.2479192060821	1038.481285478964	2	520.2477416992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_WPSIWYST_	ENST00000392723.5_2_1:151379095-151379711:-|nuORF	44.53106598305862	0.628196326904373	2				NaN	NaN	0	NaN	7097	3484	10578
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10584	29.588	NaN	3965.1	30	0	755.38	0.03				-1	 	0	63	324.6892970317551	647.3640411303102	2	324.6893615722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7098	3484	10578
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10585	29.588	NaN	4479.6	30	0	488.43	0.141	+			27357	MIPVFPPDQ	9	71	348.51307564727796	1042.517397542034	3	348.513427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MIPVFPPDQ_	ENSG00000134532|ENST00000451604|SOX5;ENST00000535530.5_1_12:23716331-23887638:-|nuORF;ENST00000536911.1_1_12:23757311-23887638:-|nuORF;nc|ENSG00000134532|P35711-2|SOX5;nc|ENSG00000134532|P35711-4|SOX5;nc|ENSG00000134532|P35711-5|SOX5;SOX5|p.K639Sfs*77|1|0.78|ENSG00000134532|chr12:23536525-23536525|T/-|frameshift_variant	40.77816245573522	0.41113185337114944	2				NaN	NaN	0	NaN	7099	3484	10578
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10599	29.62	NaN	26682	30	0	6156.7	0.213	+			50815	YERSNEYQL	9	83	601.2778911350141	1200.541229336828	2	601.2779541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YERSNEYQL_	ENSG00000087460|ENST00000371085|GNAS;ENST00000313949.11_1_20:57415898-57485881:+|nuORF;ENST00000371075.7_3_20:57415898-57485881:+|nuORF;ENST00000476196.5_1_20:57478538-57485881:+|nuORF;ENST00000477931.5_1_20:57464155-57485881:+|nuORF;ENST00000480975.5_1_20:57464272-57485881:+|nuORF;ENST00000487981.5_1_20:57478601-57484479:+|nuORF;ENST00000494081.5_1_20:57478601-57480533:+|nuORF;ENST00000496934.5_1_20:57473969-57485881:+|nuORF;nc|ENSG00000087460|P63092-2|GNAS;nc|ENSG00000087460|P63092-3|GNAS;nc|ENSG00000087460|P63092-4|GNAS;nc|ENSG00000087460|Q5JWF2-2|GNAS;nc|ENSG00000087460|Q5JWF2|GNAS	112.10723106719422	0.02684780151337622	2				NaN	NaN	0	NaN	7110	3487	10598
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10600	29.624	NaN	4942.8	30	0	615.15	0.106	+			12608	GEIASFDKA	9	74	469.2349627119354	936.4553724906708	2	469.23455810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEIASFDKA_	ENSG00000034510|ENST00000233143|TMSB10	54.722347961057174	0.257609425301511	2				NaN	NaN	0	NaN	7111	3487	10598
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10601	29.626	NaN	10778	30	0	1106.8	0.106			+	10094	ESLGKLIAQ	9	71	479.7813091441601	957.5480653551202	2	479.78173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ESLGKLIAQ_	REV__ENSG00000180376|ENST00000394672|CCDC66;REV__nc|ENSG00000180376|A2RUB6-3|CCDC66	95.81516180277367	0.04847050768394289	2				NaN	NaN	0	NaN	7112	3487	10598
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10602	29.627	NaN	5022.1	30	0	1377.3	0.106				-1	 	0	55	407.182246905679	812.349940878158	2	407.1817932128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7113	3487	10598
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10603	29.629	NaN	7182.1	30	0	945.27	0.106				-1	MHLYKTNK	8	66	546.7786068896935	1091.542660846187	2	546.2742919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))M(Oxidation (M))HLYKTNK_	ENSG00000089234|ENST00000419234|BRAP;nc|ENSG00000089234|Q7Z569-2|BRAP	31.954861631926434	0.7126016770032289	2				NaN	NaN	0	NaN	7114	3487	10598
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10604	29.631	NaN	5372.1	30	0	566.48	0.038	+			33711	RPFEQPQEY	9	67	597.2831903309071	1192.5518277286142	2	597.2832641601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RPFEQPQEY_	ENSG00000114446|ENST00000264538|IFT57;ENST00000465024.1_1_3:107932768-107941190:-|nuORF;ENST00000485979.1_1_3:107937380-107938376:-|nuORF;IFT57|p.K357Nfs*11|1|0.32|ENSG00000114446|chr3:108163703-108163703|T/-|frameshift_variant;IFT57|p.L380Sfs*4|1|0.03|ENSG00000114446|chr3:108162629-108162630|-/AACATACT|frameshift_variant	66.96192283764107	0.15557981141143568	2				NaN	NaN	0	NaN	7115	3487	10598
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10605	29.632	NaN	9441.9	30	0	1541.7	0.144			+	20607	KGCRQCPAQF	10	84	626.2904226491437	1250.5662923650873	2	626.2913818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C)	_KGC(Carbamidomethyl (C))RQC(Carbamidomethyl (C))PAQF_	REV__ENSG00000160563|ENST00000292035|MED27;REV__nc|ENSG00000160563|Q6P2C8-2|MED27	51.33545320467046	0.4446945571623749	2				NaN	NaN	0	NaN	7116	3487	10598
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10616	29.659	NaN	87203	30	0	9419.9	0.213	+			21273	KLNTDLYHTK	10	101	616.835463348274	1231.6563737633478	2	616.83544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KLNTDLYHTK_	ENSG00000153684|ENST00000526619|GOLGA8F;ENSG00000183629|ENST00000525590|GOLGA8G;ENSG00000261739|ENST00000562295|GOLGA8S;nc|ENSG00000181984|A6NN73|GOLGA8CP	58.22992032128504	0.38193887838457763	2				NaN	NaN	0	NaN	7124	3490	10615
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10617	29.663	NaN	60421	30	0	4353.3	0.106			+	25932	LSHCVMGMPW	10	95	580.7570203809295	1159.4994878286589	2	580.7575073242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSHCVMGMPW_	REV__ENST00000602140.1_1_19:8387163-8387238:+|nuORF	45.9519527083369	0.4943008177357963	2				NaN	NaN	0	NaN	7125	3490	10615
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10618	29.665	NaN	5657.9	30	0	1980.5	0.106				-1	 	0	62	343.21691821236146	684.419283491523	2	343.21697998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7126	3490	10615
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10619	29.667	NaN	7363.3	30	0	911.29	0.106	+			40029	STMVDVRVMK	10	80	583.3069244729952	1164.5992960127903	2	583.3070678710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STMVDVRVMK_	ENSG00000085224|ENST00000373344|ATRX;nc|ENSG00000085224|P46100-2|ATRX;nc|ENSG00000085224|P46100-3|ATRX;nc|ENSG00000085224|P46100-4|ATRX;nc|ENSG00000085224|P46100-5|ATRX	68.78561909154949	0.2872414881718259	2				NaN	NaN	0	NaN	7127	3490	10615
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10620	29.668	NaN	5264.2	30	0	1101.2	0.106	+			10596	EYLDRAEKL	9	76	568.8017072779968	NaN	0	568.8017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EYLDRAEKL_	ENSG00000119541|ENST00000238497|VPS4B;ENST00000591475.5_1_18:61064221-61089576:-|nuORF	93.1432384553994	0.0352600271724948	2				NaN	NaN	0	NaN	7128	3490	10615
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10621	29.67	NaN	6417.8	30	0	748.32	0.106	+			27749	MQPHSEWEV	9	70	381.50341483608014	1141.4884151084404	3	381.5035705566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MQPHSEWEV_	ENST00000532054.1_1_11:32605755-32605815:+|nuORF	35.61828744233558	0.47037581924408073	2				NaN	NaN	0	NaN	7129	3490	10615
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10622	29.672	NaN	5654.8	30	0	630.25	0.034	+			849	AEGPVVEKI	9	70	471.2686906753022	940.5228284174044	2	471.2686462402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AEGPVVEKI_	CHD7|p.D2988Mfs*3|5|0.36|ENSG00000171316|chr8:60865895-60865895|G/-|frameshift_variant;CHD7|p.G2228Lfs*52|1|0.03|ENSG00000171316|chr8:60853406-60853407|-/TTGCCTTC|frameshift_variant;CHD7|p.L1020*|1|0.09|ENSG00000171316|chr8:60822599-60822599|T/-|frameshift_variant;CHD7|p.N2588Ifs*4|1|0.14|ENSG00000171316|chr8:60861054-60861054|A/-|frameshift_variant;ENSG00000171316|ENST00000423902|CHD7;nc|ENSG00000171316|Q9P2D1-2|CHD7;nc|ENSG00000171316|Q9P2D1-3|CHD7	85.86182877749512	0.07653218437724067	2				NaN	NaN	0	NaN	7130	3490	10615
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10635	29.7	NaN	68413	30	0	12204	0.214	+			14844	GTLMWHQMK	9	89	566.2752704004243	1130.5359878676486	2	566.2757568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTLMWHQMK_	ENST00000346169.6_1_3:184032401-184033585:+|nuORF;ENST00000352767.7_2_3:184032446-184033585:+|nuORF	191.6257511998002	0.00012895968667509943	2				NaN	NaN	0	NaN	7140	3493	10634
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10636	29.704	NaN	53208	30	0	4255.1	0.106	+			39726	STISIFHCK	9	105	546.7786068896935	1091.542660846187	2	546.7784423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_STISIFHC(Carbamidomethyl (C))K_	ENST00000554584.5_1_14:64375879-64407376:+|nuORF	101.60071028292904	0.0375685401170269	2				NaN	NaN	0	NaN	7141	3493	10634
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10637	29.706	NaN	26684	30	0	11205	0.106	+			39727	STISIFHCK	9	86	364.85474385088224	1091.5424021528468	3	364.85498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_STISIFHC(Carbamidomethyl (C))K_	ENST00000554584.5_1_14:64375879-64407376:+|nuORF	65.46538089061403	0.16805504838372562	2				NaN	NaN	0	NaN	7142	3493	10634
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10638	29.707	NaN	9608.7	30	0	1175.9	0.106			+	3904	ATARESGPIA	10	77	486.7590103025369	971.5034676718739	2	486.75872802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATARESGPIA_	REV__CPAMD8|p.M1571Cfs*32|1|0.32|ENSG00000160111|chr19:16902765-16902765|G/-|frameshift_variant;REV__ENSG00000160111|ENST00000443236|CPAMD8;REV__nc|ENSG00000160111|Q8IZJ3-2|CPAMD8	44.377184641726394	0.5088115166961078	2				NaN	NaN	0	NaN	7143	3493	10634
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10639	29.709	NaN	7677.9	30	0	1320.7	0.106				-1	 	0	69	336.53411418053076	1006.5805131417924	3	336.5342102050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7144	3493	10634
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10640	29.711	NaN	9134.6	30	0	1184.1	0.106	+			25183	LMAKAGQEELG	11	82	573.7949295611556	1145.5753061891112	2	573.7950439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LMAKAGQEELG_	ENSG00000187642|ENST00000433179|PERM1;nc|ENSG00000187642|Q5SV97-3|PERM1;PERM1|p.P563Lfs*5|1|0.17|ENSG00000187642|chr1:979342-979342|G/-|frameshift_variant;PERM1|p.Q529Rfs*39|1|0.27|ENSG00000187642|chr1:979445-979445|G/-|frameshift_variant	79.71258880314673	0.15476893924564336	2				NaN	NaN	0	NaN	7145	3493	10634
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10641	29.713	NaN	14141	30	0	8479.4	0.038				-1	RYELSTMNM	9	76	387.50705562449616	1159.4993374736885	3	387.5072937011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_RYELSTMNM(Oxidation (M))_	ENST00000396987.7_1_8:41456031-41456094:+|nuORF	33.921630207806714	0.48623198279849766	2				NaN	NaN	0	NaN	7146	3493	10634
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10652	29.739	NaN	23666	30	0	14359	0.214	+			30889	QEKKVVVYL	9	76	553.3343931671639	1104.6542334011276	2	553.3345336914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QEKKVVVYL_	CTSC|p.F302Lfs*27|1|0.1|ENSG00000109861|chr11:88294495-88294496|-/A|frameshift_variant;CTSC|p.N427Kfs*9|1|0.09|ENSG00000109861|chr11:88294117-88294118|-/T|frameshift_variant;CTSC|p.V126Gfs*3|1|0.2|ENSG00000109861|chr11:88312496-88312497|-/C|frameshift_variant;ENSG00000109861|ENST00000227266|CTSC;ENST00000393301.4_1_11:88059607-88070840:-|nuORF;ENST00000534131.1_1_11:88068041-88070840:-|nuORF;nc|ENSG00000109861|P53634-2|CTSC;nc|ENSG00000109861|P53634-3|CTSC	87.75429964447693	0.0711966946989736	2				NaN	NaN	0	NaN	7154	3496	10651
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10653	29.742	NaN	8318.4	30	0	779.36	0.106	+			20424	KETSYEEAL	9	73	535.256051441451	1068.4975499497018	2	535.2562866210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KETSYEEAL_	ENSG00000125844|ENST00000377813|RRBP1;nc|ENSG00000125844|Q9P2E9-3|RRBP1;RRBP1|p.A628Gfs*69|1|0.35|ENSG00000125844|chr20:17621915-17621916|-/T|frameshift_variant;RRBP1|p.N91Mfs*2|1|0.04|ENSG00000125844|chr20:17660238-17660238|G/-|frameshift_variant	96.0336014099291	0.047854655524928534	2				NaN	NaN	0	NaN	7155	3496	10651
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10654	29.744	NaN	10053	30	0	3145.8	0.106	+			25020	LLGSTLKNFL	10	77	369.22512442147035	1104.653543864611	3	369.2251892089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LLGSTLKNFL_	ENST00000265339.6_1_5:133726790-133726904:+|nuORF	24.20275056022122	0.6821818413321409	2				NaN	NaN	0	NaN	7156	3496	10651
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10655	29.746	NaN	6602.3	30	0	1387	0.106			+	31211	QGRTARAVA	9	63	465.26604981063645	928.5175466880729	2	465.2635498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QGRTARAVA_	REV__ENST00000327492.3_1_22:41842635-41842764:-|nuORF	25.57405402267927	0.5642445186134241	2				NaN	NaN	0	NaN	7157	3496	10651
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10656	29.748	NaN	6365.1	30	0	1583.2	0.106	+			24739	LHRLPSRTF	9	70	376.22152247064935	1125.6427380121481	3	376.2215881347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LHRLPSRTF_	ENST00000318560.5_1_9:133761241-133761367:+|nuORF	30.317721548370564	0.5199124245378496	2				NaN	NaN	0	NaN	7158	3496	10651
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10657	29.75	NaN	7462	30	0	975.69	0.106			+	524	ACSVVALMAL	10	79	517.7710340323227	NaN	0	517.7706909179688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_AC(Carbamidomethyl (C))SVVALMAL_	REV__ENSG00000142396|ENST00000413518|ERVK3-1	71.29570347882199	0.14229580214754176	2				NaN	NaN	0	NaN	7159	3496	10651
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10658	29.752	NaN	6671.9	30	0	1068.4	0.036			+	1963	AIWHVTFSN	9	93	358.85149132286125	1073.5326445687838	3	358.851318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AIWHVTFSN_	REV__ENSG00000115414|ENST00000354785|FN1;REV__ENST00000492816.6_1_2:216249553-216256565:-|nuORF;REV__FN1|p.L1714*|1|0.2|ENSG00000115414|chr2:215380832-215380832|G/-|frameshift_variant;REV__FN1|p.S1791Rfs*9|1|0.07|ENSG00000115414|chr2:215378239-215378239|A/-|frameshift_variant;REV__nc|ENSG00000115414|P02751-1|FN1;REV__nc|ENSG00000115414|P02751-10|FN1;REV__nc|ENSG00000115414|P02751-11|FN1;REV__nc|ENSG00000115414|P02751-13|FN1;REV__nc|ENSG00000115414|P02751-14|FN1;REV__nc|ENSG00000115414|P02751-17|FN1;REV__nc|ENSG00000115414|P02751-3|FN1;REV__nc|ENSG00000115414|P02751-4|FN1;REV__nc|ENSG00000115414|P02751-5|FN1;REV__nc|ENSG00000115414|P02751-6|FN1;REV__nc|ENSG00000115414|P02751-7|FN1;REV__nc|ENSG00000115414|P02751-8|FN1;REV__nc|ENSG00000115414|P02751-9|FN1	23.52269567125451	0.5834155526130771	2				NaN	NaN	0	NaN	7160	3496	10651
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10670	29.778	NaN	39987	30	0	16027	0.214				-1	CRETCNCQS	9	80	579.2099524181133	1156.4053519030265	2	579.2101440429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_CRETC(Carbamidomethyl (C))NC(Carbamidomethyl (C))QS_	ENSG00000164283|ENST00000381405|ESM1	42.86426827375447	0.38666266728046506	2				NaN	NaN	0	NaN	7169	3499	10669
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10671	29.781	NaN	17806	30	0	1356	0.106	+			17698	IELNQQNKL	9	74	550.3091202336093	1098.6036875340185	2	550.3092651367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IELNQQNKL_	ENSG00000134996|ENST00000346234|OSTF1;OSTF1|p.K191Rfs*11|1|0.32|ENSG00000134996|chr9:75140914-75140914|A/-|frameshift_variant	141.52041321563706	0.009766778904176347	2				NaN	NaN	0	NaN	7170	3499	10669
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10672	29.783	NaN	8597.8	30	0	2419.2	0.106	+			43248	TEWLDGKHV	9	84	362.1853678680171	1083.5342742042515	3	362.18548583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TEWLDGKHV_	ENSG00000196262|ENST00000468812|PPIA;ENSG00000236334|ENST00000419275|PPIAL4G;ENSG00000263353|ENST00000577856|PPIAL4A;ENSG00000270339|ENST00000584068|PPIAL4H;ENSG00000271567|ENST00000581164|PPIAL4E;ENSG00000279782|ENST00000581138|PPIAL4F;ENST00000414143.1_1_20:25348913-25349114:-|nuORF;ENST00000420099.1_1_13:91924337-91924628:-|nuORF;ENST00000424692.3_1_4:124983938-124984139:+|nuORF;ENST00000450588.1_1_20:36158731-36158923:+|nuORF;ENST00000454070.2_1_1:101736433-101736811:-|nuORF;ENST00000462517.1_1_3:57927876-57927939:+|nuORF;ENST00000527147.1_1_11:100537243-100537690:+|nuORF;ENST00000557282.1_1_12:98984503-98984704:-|nuORF;ENST00000577627.1_1_18:5002795-5003119:-|nuORF;nc|ENSG00000196262|P62937-2|PPIA;nc|ENSG00000288867|A0A0B4J2A2|PPIAL4C;nc|ENSG00000289549|F5H284|PPIAL4D	42.86426827375447	0.38666266728046506	2				NaN	NaN	0	NaN	7171	3499	10669
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10673	29.785	NaN	5327.7	30	0	674.71	0.106			+	46120	VDIGQGLL	8	68	407.7372632644011	813.4599735956023	2	407.737060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VDIGQGLL_	REV__ENST00000564587.5_1_15:75628430-75630983:+|nuORF	47.91560031466742	0.6071945918984287	2				NaN	NaN	0	NaN	7172	3499	10669
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10674	29.787	NaN	6239.1	30	0	881.13	0.106			+	31552	QLLTEKSQ	8	78	473.76385639743	945.51315986166	2	473.7635498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QLLTEKSQ_	REV__ENSG00000148297|ENST00000343730|MED22;REV__ENST00000482295.1_1_9:136213358-136213517:-|nuORF;REV__nc|ENSG00000148297|Q15528-2|MED22	47.657333605630114	0.6087971902037268	2				NaN	NaN	0	NaN	7173	3499	10669
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10675	29.789	NaN	7141.7	30	0	724.55	0.106	+			44110	TPVKDLVKY	9	70	531.8136083662041	1061.6126637992081	2	531.8137817382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TPVKDLVKY_	ENSG00000129534|ENST00000310806|MIS18BP1;MIS18BP1|p.K1063Nfs*18|1|0.14|ENSG00000129534|chr14:45206134-45206134|T/-|frameshift_variant;MIS18BP1|p.M66*|1|0.35|ENSG00000129534|chr14:45247091-45247091|T/-|frameshift_variant;MIS18BP1|p.N380Ifs*3|5|0.35|ENSG00000129534|chr14:45242038-45242038|T/-|frameshift_variant;MIS18BP1|p.S991Nfs*17|1|0.35|ENSG00000129534|chr14:45217046-45217050|TGTAC/-|frameshift_variant;MIS18BP1|p.V839Sfs*20|1|0.14|ENSG00000129534|chr14:45224073-45224073|G/-|frameshift_variant;nc|ENSG00000129534|Q6P0N0-2|MIS18BP1	46.45678178249821	0.34452392205506005	2				NaN	NaN	0	NaN	7174	3499	10669
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10676	29.791	NaN	10507	30	0	1101.4	0.035	+			11628	FQAPTAKEM	9	89	511.75236696233867	1021.4901809914774	2	511.7516174316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FQAPTAKEM_	ENSG00000125637|ENST00000245796|PSD4;ENST00000409656.5_1_2:113943320-113958989:+|nuORF;ENST00000418251.6_1_2:113943320-113958989:+|nuORF;nc|ENSG00000125637|Q8NDX1-2|PSD4;PSD4|p.S882P|1|0.5|ENSG00000125637|chr2:113198759-113198759|T/C|missense_variant	56.43379154798735	0.2433427591689151	2				NaN	NaN	0	NaN	7175	3499	10669
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10687	29.816	NaN	109270	30	0	41021	0.214	+			19194	IYTSSVNRL	9	81	526.7905545388599	1051.5665561445196	2	526.7906494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IYTSSVNRL_	ENSG00000184432|ENST00000333188|COPB2;nc|ENSG00000184432|P35606-2|COPB2	141.52041321563706	0.009766778904176347	2				NaN	NaN	0	NaN	7183	3502	10686
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10688	29.82	NaN	22107	30	0	4896.8	0.106			+	-1	PQQSFFYMP	9	90	580.7570203809295	1159.4994878286589	2	580.757568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_PQQSFFYM(Oxidation (M))P_	REV__OR2G3|p.L63Sfs*14|1|0.15|ENSG00000177476|chr1:247605765-247605766|-/T|frameshift_variant	37.15910966729921	0.4535818937225704	2				NaN	NaN	0	NaN	7184	3502	10686
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10689	29.822	NaN	12072	30	0	3164.6	0.106	+			14626	GTGNLGFPK	9	76	445.7398390589014	889.4651251846028	2	445.7399597167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTGNLGFPK_	ENSG00000173193|ENST00000474629|PARP14;nc|ENSG00000173193|Q460N5-1|PARP14;nc|ENSG00000173193|Q460N5-3|PARP14;nc|ENSG00000173193|Q460N5-4|PARP14;nc|ENSG00000173193|Q460N5-5|PARP14;PARP14|p.N1416Efs*19|1|0.2|ENSG00000173193|chr3:122718388-122718389|-/A|frameshift_variant	101.60071028292904	0.0375685401170269	2				NaN	NaN	0	NaN	7185	3502	10686
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10690	29.824	NaN	9545.2	30	0	1283.3	0.106	+			49577	VYENMKQTL	9	88	563.284011131627	1124.553469330054	2	563.2844848632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VYENMKQTL_	ENSG00000085491|ENST00000565488|SLC25A24;nc|ENSG00000085491|Q6NUK1-2|SLC25A24	120.8684288430529	0.02067403653475984	2				NaN	NaN	0	NaN	7186	3502	10686
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10691	29.826	NaN	6558.1	30	0	732.95	0.106	+			50503	YANIGKTL	8	75	440.2502319623585	NaN	0	440.25030517578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YANIGKTL_	ENSG00000115841|ENST00000354545|RMDN2;ENST00000440353.5_1_2:38177721-38224681:+|nuORF;nc|ENSG00000115841|Q96LZ7-2|RMDN2;nc|ENSG00000115841|Q96LZ7-3|RMDN2;nc|ENSG00000115841|Q96LZ7-4|RMDN2;RMDN2|p.F331Efs*33|1|0.12|ENSG00000115841|chr2:37997459-37997462|TGTT/-|frameshift_variant	101.60071028292904	1.7418937515398478	2				NaN	NaN	0	NaN	7187	3502	10686
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10692	29.827	NaN	6656.4	30	0	631.8	0.106			+	7433	DFCVGLKGKL	10	73	540.29833984375	NaN	0	540.29833984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DFCVGLKGKL_	REV__ENSG00000165732|ENST00000354185|DDX21;REV__nc|ENSG00000165732|Q9NR30-2|DDX21	51.52775601994872	0.29594378441454594	2				NaN	NaN	0	NaN	7188	3502	10686
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10693	29.829	NaN	2423.7	30	0	352.45	0.033	+			11935	FVHESPAL	8	54	450.234630893425	898.45470885365	2	450.2344970703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FVHESPAL_	ENSG00000155957|ENST00000358230|TMBIM4	57.452649787351945	0.526999880452039	2				NaN	NaN	0	NaN	7189	3502	10686
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10708	29.86	NaN	9622.7	30	0	1848.5	0.214	+			2035	AKQTLISV	8	75	430.26600549559356	858.5174580579871	2	430.265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AKQTLISV_	ENSG00000094975|ENST00000263688|SUCO;nc|ENSG00000094975|Q9UBS9-2|SUCO	79.71258880314673	0.32596852995588826	2				NaN	NaN	0	NaN	7201	3505	10707
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10709	29.864	NaN	15241	30	0	3461.9	0.106				-1	PCKSVCQRV	9	67	538.7698097644926	1075.5250665957851	2	538.7700805664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_PCKSVC(Carbamidomethyl (C))QRV_	SFRP4|p.A104V|1|0.48|ENSG00000106483|chr7:37916227-37916227|G/A|missense_variant	54.776311868738084	0.25715957988447635	2				NaN	NaN	0	NaN	7202	3505	10707
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10710	29.866	NaN	12921	30	0	1322.7	0.106	+			38464	SSASALTGLTK	11	91	518.2875083761527	1034.5604638191053	2	518.2868041992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSASALTGLTK_	ENSG00000164880|ENST00000404767|INTS1;INTS1|p.Q467Afs*140|1|0.05|ENSG00000164880|chr7:1498439-1498440|-/A|frameshift_variant;INTS1|p.R843Pfs*31|1|0.39|ENSG00000164880|chr7:1487438-1487439|-/G|frameshift_variant	80.91624569148213	0.14473443340275	2				NaN	NaN	0	NaN	7203	3505	10707
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10711	29.868	NaN	15295	30	0	3353.3	0.106	+			1226	AEQRGELAL	9	84	493.7670788969441	985.5196048606882	2	493.7666931152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEQRGELAL_	CON__O95678;CON__P07744;CON__P13647;CON__Q5XKE5;CON__Q5XQN5;CON__Q7RTT2;CON__Q8BGZ7;CON__Q8N1N4-2;CON__Q922U2;ENSG00000170423|ENST00000304620|KRT78;ENSG00000170454|ENST00000252245|KRT75;ENSG00000185640|ENST00000330553|KRT79;ENSG00000186081|ENST00000252242|KRT5;ENST00000546453.1_1_12:53215658-53224087:-|nuORF;ENST00000552629.5_1_12:52910419-52914113:-|nuORF;nc|ENSG00000170423|Q8N1N4-2|KRT78	78.26377905018397	0.10505600812668463	2				NaN	NaN	0	NaN	7204	3505	10707
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10712	29.869	NaN	5061.2	30	0	454.76	0.106	+			50859	YEVQSEAKL	9	69	533.7750976917819	1065.5356424503636	2	533.7745361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YEVQSEAKL_	ENSG00000099991|ENST00000263119|CABIN1;nc|ENSG00000099991|Q9Y6J0-2|CABIN1	65.46538089061403	0.16805504838372562	2				NaN	NaN	0	NaN	7205	3505	10707
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10713	29.871	NaN	7307	30	0	907.23	0.036	+			1959	AIVKLFLKK	9	80	530.3682805352533	1058.7220081373066	2	530.3681030273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AIVKLFLKK_	AP2B1|p.N760Ifs*17|1|0.37|ENSG00000006125|chr17:35674314-35674314|A/-|frameshift_variant;ENSG00000006125|ENST00000610402|AP2B1;ENSG00000100280|ENST00000357586|AP1B1;nc|ENSG00000006125|P63010-3|AP2B1;nc|ENSG00000006125|P63010|AP2B1;nc|ENSG00000100280|Q10567-2|AP1B1;nc|ENSG00000100280|Q10567-3|AP1B1;nc|ENSG00000100280|Q10567-4|AP1B1	77.31757898189308	0.1091473830098891	2				NaN	NaN	0	NaN	7206	3505	10707
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10714	29.872	NaN	7074.4	30	0	874.4	0.143	+			14821	GTLGVEHSWDT	11	73	601.2778911350141	1200.541229336828	2	602.2762451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GTLGVEHSWDT_	ENSG00000183801|ENST00000329293|OLFML1;ENST00000528758.1_1_11:7507087-7531416:+|nuORF	36.446750945000026	0.6065623449959539	2				NaN	NaN	0	NaN	7207	3505	10707
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10725	29.899	NaN	14539	30	0	5928	0.214			+	26956	LYILENKE	8	77	511.2828043846329	1020.5510558360659	2	511.2918395996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LYILENKE_	REV__tr|U7SFT6|U7SFT6_FUSNUMORNrepeatproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02228PE=4SV=1	60.97194046774394	0.49215940876911696	2				NaN	NaN	0	NaN	7215	3508	10724
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10726	29.903	NaN	9972.2	30	0	2879.3	0.106	+			1960	AIVKLFLKK	9	70	353.91437499784143	1058.7212955937243	3	353.9143981933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AIVKLFLKK_	AP2B1|p.N760Ifs*17|1|0.37|ENSG00000006125|chr17:35674314-35674314|A/-|frameshift_variant;ENSG00000006125|ENST00000610402|AP2B1;ENSG00000100280|ENST00000357586|AP1B1;nc|ENSG00000006125|P63010-3|AP2B1;nc|ENSG00000006125|P63010|AP2B1;nc|ENSG00000100280|Q10567-2|AP1B1;nc|ENSG00000100280|Q10567-3|AP1B1;nc|ENSG00000100280|Q10567-4|AP1B1	71.87747018426188	0.13267044672804276	2				NaN	NaN	0	NaN	7216	3508	10724
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10727	29.905	NaN	11759	30	0	3252.6	0.106	+			23608	LANVKPLWAA	10	87	361.54998165511694	1081.6281155655508	3	361.55010986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LANVKPLWAA_	ENST00000530869.1_1_8:42614249-42623609:-|nuORF	51.19269402634007	0.44601001148513897	2				NaN	NaN	0	NaN	7217	3508	10724
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10728	29.907	NaN	12081	30	0	3401.2	0.106				-1	EAHKQMLLLW	10	73	642.8424360633549	1283.6703191935096	2	642.8428955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_EAHKQM(Oxidation (M))LLLW_	ENST00000471683.5_1_1:28916264-28944539:-|nuORF	20.94693142431847	0.7087701759873708	2				NaN	NaN	0	NaN	7218	3508	10724
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10729	29.908	NaN	12308	30	0	4286.6	0.106	+			14213	GSSGSFYLK	9	72	473.2376089646306	944.4606649960613	2	473.2372131347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GSSGSFYLK_	ENSG00000129422|ENST00000693296|MTUS1;ENST00000518975.1_1_8:17566427-17579410:-|nuORF;nc|ENSG00000129422|Q9ULD2-2|MTUS1;nc|ENSG00000129422|Q9ULD2-6|MTUS1	49.536043120802724	0.308405419312776	2				NaN	NaN	0	NaN	7219	3508	10724
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10730	29.91	NaN	7074.3	30	0	616.52	0.106	+			19877	KEEQFKQVF	9	77	591.8117592441909	1181.6089655551816	2	591.8118896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KEEQFKQVF_	ENSG00000168090|ENST00000303904|COPS6;ENST00000496358.1_1_7:99686670-99688376:+|nuORF	89.02883481214508	0.06760336634167786	2				NaN	NaN	0	NaN	7220	3508	10724
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10731	29.912	NaN	5115.3	30	0	1026.9	0.037				-1	 	0	61	367.19607755537095	366.18880108877096	1	368.20367431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7221	3508	10724
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10743	29.938	NaN	5418.5	30	0	574.24	0.214			+	11816	FSTRPARM	8	75	483.2530393429834	964.4915257527668	2	483.2525634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FSTRPARM_	REV__ENST00000424085.6_1_1:31405329-31405398:-|nuORF	49.44154591367651	0.597725784090933	2				NaN	NaN	0	NaN	7230	3511	10742
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10744	29.942	NaN	7828.7	30	0	873.8	0.106	+			13353	GKVFVFPRE	9	80	539.806174876841	1077.597796820482	2	539.8067626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GKVFVFPRE_	APCS|p.K162Sfs*53|1|0.05|ENSG00000132703|chr1:159588520-159588521|-/GCACAGAGTCCCACATGTAC|frameshift_variant;ENSG00000132703|ENST00000255040|APCS	51.19269402634007	0.2889735674168909	2				NaN	NaN	0	NaN	7231	3511	10742
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10745	29.944	NaN	5360.6	30	0	388.89	0.106			+	13206	GIDAILSGPK	10	75	485.7816876723253	969.5488224114506	2	485.7818298339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GIDAILSGPK_	REV__ENSG00000250305|ENST00000524591|TRMT9B;REV__nc|ENSG00000250305|Q9P272-3|TRMT9B	77.31757898189308	0.2175361111083648	2				NaN	NaN	0	NaN	7232	3511	10742
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10746	29.946	NaN	8405.4	30	0	1544.1	0.106			+	9925	EQVAVVASVGA	11	81	515.2842095847524	1028.5538662363047	2	515.2867431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EQVAVVASVGA_	REV__ENST00000602004.1_1_19:39616447-39616489:+|nuORF	45.02220120713402	0.4892240028381124	2				NaN	NaN	0	NaN	7233	3511	10742
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10747	29.947	NaN	10010	30	0	1414.5	0.106	+			8216	EAEGARFICL	10	81	554.7764609241242	1107.5383689150483	2	554.7772216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EAEGARFICL_	ENST00000546954.1_1_12:120881792-120882053:-|nuORF	90.36981228632155	0.12895663264417576	2				NaN	NaN	0	NaN	7234	3511	10742
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10748	29.949	NaN	8652.4	30	0	1853.4	0.106			+	50075	WGCLGHPQL	9	76	505.74732144939577	1009.4800899655916	2	505.7470397949219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_WGCLGHPQL_	REV__ENST00000473879.1_1_7:2578318-2580643:-|nuORF	42.47446043378293	0.39123495718708534	2				NaN	NaN	0	NaN	7235	3511	10742
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10749	29.951	NaN	6088.4	30	0	1891	0.033				-1	 	0	62	416.2280016852063	415.22072521860633	1	416.22796630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7236	3511	10742
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10761	29.976	NaN	12248	30	0	4737.1	0.214			+	-1	ACRPRRAEG	9	87	358.18536987753083	1071.5342802327925	3	358.1853332519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_AC(Carbamidomethyl (C))RPRRAEG_	REV__ENSG00000214193|ENST00000453908|SH3D21;REV__SH3D21|p.H471Tfs*31|1|0.4|ENSG00000214193|chr1:36320403-36320403|C/-|frameshift_variant	25.57405402267927	0.5642445186134241	2				NaN	NaN	0	NaN	7245	3514	10760
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10762	29.98	NaN	10072	30	0	2004.4	0.106			+	37976	SPHPGPLP	8	66	401.21639905556685	800.4182451779337	2	401.2162170410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SPHPGPLP_	REV__ENSG00000059915|ENST00000020673|PSD;REV__PSD|p.R334W|1|0.39|ENSG00000059915|chr10:102414987-102414987|G/A|missense_variant	37.028477286268924	0.6747514403204248	2				NaN	NaN	0	NaN	7246	3514	10760
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10763	29.982	NaN	5715.3	30	0	927.71	0.106			+	-1	LGMKCPRVL	9	72	537.3015087355308	1072.5884645378615	2	537.3014526367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LGMKC(Carbamidomethyl (C))PRVL_	REV__ENSG00000108932|ENST00000580666|SLC16A6	47.91560031466742	0.327412564698279	2				NaN	NaN	0	NaN	7247	3514	10760
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10764	29.984	NaN	6568.8	30	0	1394.1	0.106	+			50841	YETQVKVM	8	68	499.25465820536294	996.4947634775259	2	499.25445556640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YETQVKVM_	ENSG00000120948|ENST00000240185|TARDBP;nc|ENSG00000120948|Q13148-4|TARDBP	107.00750918261382	0.24681273948614665	2				NaN	NaN	0	NaN	7248	3514	10760
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10765	29.986	NaN	5129.2	30	0	1241.9	0.106			+	33791	RQGEFVLE	8	71	489.2559905384894	976.4974281437788	2	489.255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RQGEFVLE_	REV__ENSG00000108556|ENST00000649488|CHRNE;REV__ENST00000572438.1_1_17:4802033-4804946:-|nuORF	40.77816245573522	0.6514838689002179	2				NaN	NaN	0	NaN	7249	3514	10760
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10766	29.987	NaN	13081	30	0	892.62	0.106	+			10557	EYCLQGNIK	9	86	562.774131413032	1123.533709892864	2	562.7740478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_EYC(Carbamidomethyl (C))LQGNIK_	PLEKHH2|p.H1178Y|1|0.48|ENSG00000152527|chr2:43743966-43743966|C/T|missense_variant	116.90359126533652	0.02307425081617795	2				NaN	NaN	0	NaN	7250	3514	10760
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10767	29.989	NaN	6801.3	30	0	1138.3	0.037	+			20776	KHTEATDHSH	10	76	581.7666030687143	1161.5186532042285	2	581.7666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KHTEATDHSH_	ENST00000498097.5_1_2:99770790-99770877:-|nuORF	37.81151784470057	0.569310847604193	2				NaN	NaN	0	NaN	7251	3514	10760
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10779	30.015	NaN	24772	30	0	2570.6	0.214	+			39130	SSVFLAIKK	9	79	496.8106168719854	991.6066808107709	2	496.8103942871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSVFLAIKK_	ENST00000274030.10_1_4:120160492-120160642:+|nuORF	118.74307786436346	0.02196067127630568	2				NaN	NaN	0	NaN	7260	3517	10778
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10780	30.019	NaN	15059	30	0	8791.7	0.106			+	24832	LITSLKGGGN	10	72	480.2794078622141	958.5442627912282	2	480.2792663574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LITSLKGGGN_	REV__nc|ENSG00000155275|Q8IYL2-2|TRMT44	44.377184641726394	0.5088115166961078	2				NaN	NaN	0	NaN	7261	3517	10778
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10781	30.021	NaN	11803	30	0	663.82	0.106	+			230	AAMELVLRK	9	82	515.8058951675674	1029.5972374019348	2	515.8079223632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AAMELVLRK_	ENSG00000137177|ENST00000259711|KIF13A;KIF13A|p.H1262R|1|0.18|ENSG00000137177|chr6:17780791-17780791|T/C|missense_variant;nc|ENSG00000137177|Q9H1H9-2|KIF13A;nc|ENSG00000137177|Q9H1H9-3|KIF13A;nc|ENSG00000137177|Q9H1H9-4|KIF13A	58.22992032128504	0.22837015374068087	2				NaN	NaN	0	NaN	7262	3517	10778
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10782	30.023	NaN	5883.9	30	0	1034.1	0.106			+	25905	LSGHLELVN	9	70	491.27167503426824	NaN	0	491.271728515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSGHLELVN_	REV__tr|U7SRN0|U7SRN0_FUSNUNAD-dependentproteindeacetylaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=cobBPE=3SV=1	58.78195531508484	0.1545138866451181	2				NaN	NaN	0	NaN	7263	3517	10778
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10783	30.025	NaN	4356.4	30	0	881.99	0.106	+			12323	GDGVPAAPGLP	11	65	475.7500297375766	949.4855065419532	2	475.75042724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GDGVPAAPGLP_	ENSG00000114853|ENST00000232974|ZBTB47;nc|ENSG00000114853|Q9UFB7-2|ZBTB47	34.172542307311794	0.6313490974540716	2				NaN	NaN	0	NaN	7264	3517	10778
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10784	30.026	NaN	5667	30	0	577.14	0.106	+			17992	IHSKQSIYKE	10	73	616.835463348274	1231.6563737633478	2	616.8358764648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IHSKQSIYKE_	EFCAB8|p.E1079Rfs*8|1|0.13|ENSG00000215529|chr20:32959919-32959920|-/G|frameshift_variant;EFCAB8|p.T943Hfs*12|1|0.12|ENSG00000215529|chr20:32943665-32943666|-/C|frameshift_variant;ENSG00000215529|ENST00000400522|EFCAB8	33.921630207806714	0.6028135429846169	2				NaN	NaN	0	NaN	7265	3517	10778
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10785	30.028	NaN	6119.8	30	0	905.67	0.035			+	47281	VMVTSGAVCI	10	72	518.7607418990914	1035.5069308649827	2	518.76025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_VMVTSGAVC(Carbamidomethyl (C))I_	REV__ENSG00000172548|ENST00000311946|NIPAL4;REV__nc|ENSG00000172548|Q0D2K0-2|NIPAL4	53.351449002276354	0.42630798468005626	2				NaN	NaN	0	NaN	7266	3517	10778
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10797	30.054	NaN	11756	30	0	1422.2	0.214	+			12598	GEHLKTDLL	9	72	513.284647086813	1024.554741240426	2	513.2849731445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEHLKTDLL_	ENSG00000100345|ENST00000216181|MYH9;MYH9|p.I784*|1|0.07|ENSG00000100345|chr22:36304036-36304036|G/-|frameshift_variant;nc|ENSG00000100345|P35579-2|MYH9	70.8162118820467	0.13725933411854815	2				NaN	NaN	0	NaN	7275	3520	10796
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10798	30.057	NaN	8590.4	30	0	1699.7	0.106				-1	 	0	67	336.53411418053076	1006.5805131417924	3	336.53424072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7276	3520	10796
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10799	30.059	NaN	7678.1	30	0	2108.9	0.106	+			15730	GVSAAFAVK	9	63	425.24520803642105	848.4758631396421	2	425.244873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GVSAAFAVK_	BZW1|p.L189P|1|0.05|ENSG00000082153|chr2:200818001-200818001|T/C|missense_variant;BZW1|p.N285Tfs*11|2|0.26|ENSG00000082153|chr2:200818782-200818782|A/-|frameshift_variant;BZW1|p.N286*|1|0.04|ENSG00000082153|chr2:200818790-200818791|-/T|frameshift_variant;BZW1|p.S325Rfs*19|1|0.04|ENSG00000082153|chr2:200819989-200819990|-/ACAATATAGAA|frameshift_variant;ENSG00000082153|ENST00000409600|BZW1;nc|ENSG00000082153|Q7L1Q6-2|BZW1;nc|ENSG00000082153|Q7L1Q6-3|BZW1;nc|ENSG00000082153|Q7L1Q6-4|BZW1	134.81075121484326	0.012914550297035062	2				NaN	NaN	0	NaN	7277	3520	10796
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10800	30.061	NaN	8073.3	30	0	1413.6	0.106	+			14845	GTLMWHQMK	9	78	566.2752704004243	1130.5359878676486	2	566.2760620117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTLMWHQMK_	ENST00000346169.6_1_3:184032401-184033585:+|nuORF;ENST00000352767.7_2_3:184032446-184033585:+|nuORF	95.81516180277367	0.04847050768394289	2				NaN	NaN	0	NaN	7278	3520	10796
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10801	30.063	NaN	9197	30	0	1316.3	0.106	+			19834	KEDSNSLTL	9	74	503.7557367621241	1005.4969205910483	2	503.7560119628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEDSNSLTL_	ENSG00000136933|ENST00000373538|RABEPK;nc|ENSG00000136933|Q7Z6M1-2|RABEPK	56.43379154798735	0.2433427591689151	2				NaN	NaN	0	NaN	7279	3520	10796
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10802	30.065	NaN	8666.4	30	0	640.46	0.106	+			49783	VYRQDCETF	9	75	580.7570203809295	1159.4994878286589	2	580.756591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VYRQDCETF_	ENSG00000134283|ENST00000358314|PPHLN1;nc|ENSG00000134283|Q8NEY8-2|PPHLN1;nc|ENSG00000134283|Q8NEY8-3|PPHLN1;nc|ENSG00000134283|Q8NEY8-6|PPHLN1;nc|ENSG00000134283|Q8NEY8-9|PPHLN1;nc|ENSG00000134283|Q8NEY8|PPHLN1;PPHLN1|p.D323Ifs*4|1|0.17|ENSG00000134283|chr12:42441367-42441367|A/-|frameshift_variant	93.1432384553994	0.056003526918089595	2				NaN	NaN	0	NaN	7280	3520	10796
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10803	30.067	NaN	6896.7	30	0	3477.7	0.033	+			24410	LGAINDGNK	9	57	451.2399159369132	900.4652789406264	2	451.2397155761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LGAINDGNK_	ENSG00000188738|ENST00000424728|FSIP2;FSIP2|p.D5579Mfs*10|1|0.09|ENSG00000188738|chr2:185806029-185806029|A/-|frameshift_variant;FSIP2|p.K6152Rfs*27|1|0.43|ENSG00000188738|chr2:185807758-185807758|A/-|frameshift_variant;FSIP2|p.K6528Nfs*5|1|0.33|ENSG00000188738|chr2:185808884-185808884|A/-|frameshift_variant;FSIP2|p.V5734Yfs*24|2|0.23|ENSG00000188738|chr2:185806499-185806499|A/-|frameshift_variant;FSIP2|p.V6322*|1|0.42|ENSG00000188738|chr2:185808265-185808265|A/-|frameshift_variant;nc|ENSG00000188738|Q5CZC0-2|FSIP2	44.377184641726394	0.36891676396732553	2				NaN	NaN	0	NaN	7281	3520	10796
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10815	30.092	NaN	22692	30	0	2050.6	0.214			+	6943	CPGRAIVTI	9	75	465.26604981063645	928.5175466880729	2	465.2674865722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CPGRAIVTI_	REV__ENSG00000241697|ENST00000374879|TMEFF1;REV__nc|ENSG00000241697|Q8IYR6-2|TMEFF1	55.50420428727701	0.2510918378945873	2				NaN	NaN	0	NaN	7290	3523	10814
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10816	30.096	NaN	15179	30	0	1984.6	0.106	+			35873	SEDSHLESL	9	86	508.73039400014403	1015.4462350670881	2	508.73004150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEDSHLESL_	ENSG00000047849|ENST00000683076|MAP4;MAP4|p.R919Gfs*14|1|0.44|ENSG00000047849|chr3:47870917-47870917|G/-|frameshift_variant;MAP4|p.T960Qfs*35|1|0.3|ENSG00000047849|chr3:47869309-47869309|T/-|frameshift_variant;MAP4|p.V999*|1|0.25|ENSG00000047849|chr3:47867318-47867318|T/-|frameshift_variant;nc|ENSG00000047849|P27816-6|MAP4;nc|ENSG00000047849|P27816|MAP4	111.64827973302667	0.027316110422332632	2				NaN	NaN	0	NaN	7291	3523	10814
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10817	30.098	NaN	5706.4	30	0	724.67	0.106	+			15035	GTNPFATVK	9	60	467.75336557834	933.49217822348	2	467.75311279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTNPFATVK_	ENSG00000128298|ENST00000381669|BAIAP2L2;nc|ENSG00000128298|Q6UXY1-2|BAIAP2L2	80.45461616416974	0.09558281504443908	2				NaN	NaN	0	NaN	7292	3523	10814
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10818	30.099	NaN	6593.9	30	0	2176.6	0.106			+	42763	TDSSPGAL	8	72	374.17967312476526	NaN	0	374.1794738769531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TDSSPGAL_	REV__nc|ENSG00000177910|B4DYI2|SPATA31C2;REV__nc|ENSG00000230246|P0DKV0|SPATA31C1	19.359975847455235	1.7418937515398478	2				NaN	NaN	0	NaN	7293	3523	10814
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10819	30.101	NaN	3367.9	30	0	381.82	0.106	+			37463	SLKAGNAI	8	62	387.22934046600585	772.4441279988117	2	387.22943115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SLKAGNAI_	tr|U7T0H7|U7T0H7_FUSNUAcetaldehydedehydrogenase(Acetylating)OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00826PE=4SV=1	44.53106598305862	0.628196326904373	2				NaN	NaN	0	NaN	7294	3523	10814
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10820	30.103	NaN	2826.8	30	0	589.13	0.106			+	18851	IVAPAQRI	8	62	434.2742183870235	866.533883840847	2	434.27374267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IVAPAQRI_	REV__ENSG00000254585|ENST00000650528|MAGEL2;REV__MAGEL2|p.Q666Sfs*36|2|0.5|ENSG00000254585|chr15:23645747-23645747|G/-|frameshift_variant	44.53106598305862	0.628196326904373	2				NaN	NaN	0	NaN	7295	3523	10814
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10821	30.105	NaN	4205.1	30	0	552.95	0.036			+	27287	MGLGRCGRSR	10	76	546.7786068896935	1091.542660846187	2	546.782470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MGLGRCGRSR_	REV__ENST00000460783.1_1_21:38072046-38081802:+|nuORF	25.125986553469783	0.6746423231557295	2				NaN	NaN	0	NaN	7296	3523	10814
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10834	30.133	NaN	10796	30	0	1228.9	0.214	+			19948	KEFQEASAL	9	77	511.7611863284671	1021.5078197237342	2	511.7610778808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEFQEASAL_	ENSG00000178623|ENST00000407714|GPR35;nc|ENSG00000178623|Q9HC97-2|GPR35	96.0336014099291	0.047854655524928534	2				NaN	NaN	0	NaN	7306	3526	10833
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10835	30.136	NaN	7981.4	30	0	794.91	0.106	+			46368	VEKVPNPSL	9	74	491.78200552558997	981.54945811798	2	491.7815856933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VEKVPNPSL_	ENSG00000225663|ENST00000455127|MCRIP1;ENST00000575090.1_1_17:79781125-79781671:-|nuORF;ENST00000576679.1_2_17:79781125-79782334:-|nuORF	55.08391021199286	0.2545954270840753	2				NaN	NaN	0	NaN	7307	3526	10833
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10836	30.138	NaN	6759.1	30	0	1524.4	0.106	+			1111	AELKQVQTL	9	74	515.2994479113918	NaN	0	515.3009033203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AELKQVQTL_	ENSG00000127603|ENST00000564288|MACF1;ENST00000476350.1_1_1:39768622-39838291:+|nuORF;MACF1|p.A5223Lfs*8|1|0.21|ENSG00000127603|chr1:39388486-39388486|G/-|frameshift_variant;MACF1|p.N4824Kfs*19|1|0.33|ENSG00000127603|chr1:39387292-39387293|-/A|frameshift_variant;MACF1|p.T4896Lfs*29|1|0.27|ENSG00000127603|chr1:39387507-39387507|A/-|frameshift_variant;nc|ENSG00000127603|Q9UPN3-2|MACF1;nc|ENSG00000127603|Q9UPN3-3|MACF1;nc|ENSG00000127603|Q9UPN3-4|MACF1;nc|ENSG00000127603|Q9UPN3-5|MACF1;nc|ENSG00000127603|Q9UPN3|MACF1	65.46538089061403	0.1260090208616529	2				NaN	NaN	0	NaN	7308	3526	10833
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10837	30.14	NaN	9207.9	30	0	1354	0.106	+			16034	HAVDVDSGSVY	11	74	574.765766002738	1147.516979072276	2	574.7650146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HAVDVDSGSVY_	ENSG00000071054|ENST00000324219|MAP4K4;MAP4K4|p.G1177Efs*5|1|0.19|ENSG00000071054|chr2:101888826-101888826|G/-|frameshift_variant;nc|ENSG00000071054|O95819-2|MAP4K4;nc|ENSG00000071054|O95819-3|MAP4K4;nc|ENSG00000071054|O95819-4|MAP4K4;nc|ENSG00000071054|O95819-5|MAP4K4;nc|ENSG00000071054|O95819-6|MAP4K4;nc|ENSG00000071054|O95819|MAP4K4	54.776311868738084	0.3700837260462177	2				NaN	NaN	0	NaN	7309	3526	10833
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10838	30.142	NaN	7465.9	30	0	706.36	0.106	+			49276	VVQEPGQVFK	10	78	565.8134578362806	1129.612362739361	2	565.81396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVQEPGQVFK_	ENSG00000169180|ENST00000304658|XPO6;ENST00000570007.1_1_16:28117306-28117714:-|nuORF;nc|ENSG00000169180|Q96QU8-2|XPO6;XPO6|p.P1120Lfs*4|1|0.28|ENSG00000169180|chr16:28098557-28098557|G/-|frameshift_variant	48.601550744091256	0.46988609897316763	2				NaN	NaN	0	NaN	7310	3526	10833
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10839	30.144	NaN	7732.3	30	0	907.64	0.106			+	8633	EDGPETPESKV	11	76	594.2745513652842	1186.5345497973683	2	594.2752685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EDGPETPESKV_	REV__ENSG00000091656|ENST00000651372|ZFHX4;REV__ENST00000458716.2_1_8:77616323-77620415:+|nuORF;REV__nc|ENSG00000091656|Q86UP3-2|ZFHX4;REV__nc|ENSG00000091656|Q86UP3-3|ZFHX4;REV__nc|ENSG00000091656|Q86UP3-4|ZFHX4;REV__nc|ENSG00000091656|Q86UP3|ZFHX4;REV__ZFHX4|p.D2246*|1|0.34|ENSG00000091656|chr8:76853650-76853651|-/T|frameshift_variant;REV__ZFHX4|p.H1565Tfs*5|1|0.28|ENSG00000091656|chr8:76851613-76851613|T/-|frameshift_variant;REV__ZFHX4|p.I2143Nfs*7|1|0.31|ENSG00000091656|chr8:76853343-76853344|-/A|frameshift_variant;REV__ZFHX4|p.K1442Nfs*10|1|0.18|ENSG00000091656|chr8:76851241-76851241|A/-|frameshift_variant;REV__ZFHX4|p.K1867Nfs*7|1|0.09|ENSG00000091656|chr8:76852518-76852518|A/-|frameshift_variant;REV__ZFHX4|p.L1719Cfs*6|1|0.13|ENSG00000091656|chr8:76852073-76852073|T/-|frameshift_variant;REV__ZFHX4|p.P2056Hfs*26|1|0.19|ENSG00000091656|chr8:76853081-76853084|CCTC/-|frameshift_variant;REV__ZFHX4|p.P2056Tfs*82|1|0.25|ENSG00000091656|chr8:76853079-76853083|CTCCT/-|frameshift_variant;REV__ZFHX4|p.P2057Hfs*26|2|0.17|ENSG00000091656|chr8:76853084-76853084|C/-|frameshift_variant;REV__ZFHX4|p.Q1674Afs*4|1|0.14|ENSG00000091656|chr8:76851934-76851935|-/A|frameshift_variant;REV__ZFHX4|p.R2647Gfs*44|1|0.25|ENSG00000091656|chr8:76854854-76854854|A/-|frameshift_variant;REV__ZFHX4|p.V1343Sfs*4|1|0.08|ENSG00000091656|chr8:76850945-76850946|-/A|frameshift_variant;REV__ZFHX4|p.Y3286Ifs*70|1|0.46|ENSG00000091656|chr8:76863562-76863563|-/G|frameshift_variant	75.04331003522576	0.19369523587789836	2				NaN	NaN	0	NaN	7311	3526	10833
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10840	30.146	NaN	7874.4	30	0	1469.8	0.034	+			29482	PCSAARLAAL	10	77	486.77044792407713	971.5263429149543	2	486.77154541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PCSAARLAAL_	ENST00000535715.5_1_11:63765177-63769218:+|nuORF	54.776311868738084	0.41334902933431344	2				NaN	NaN	0	NaN	7312	3526	10833
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10852	30.172	NaN	42602	30	0	15669	0.214	+			42174	SYTSVKENF	9	93	537.7588690039839	1073.5031850747678	2	537.7590942382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SYTSVKENF_	ENSG00000112584|ENST00000476287|FAM120B;FAM120B|p.Y298Ifs*24|1|0.3|ENSG00000112584|chr6:170318277-170318277|T/-|frameshift_variant;nc|ENSG00000112584|Q96EK7-2|FAM120B	120.8684288430529	0.02067403653475984	2				NaN	NaN	0	NaN	7321	3529	10851
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10853	30.175	NaN	19707	30	0	2676.6	0.106	+			30695	QDAKMAGIGI	10	90	502.2653971188315	1002.516241304463	2	502.2654724121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QDAKMAGIGI_	CON__P19012	58.22992032128504	0.38193887838457763	2				NaN	NaN	0	NaN	7322	3529	10851
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10854	30.177	NaN	20171	30	0	1887.3	0.106	+			19673	KDMVTQASL	9	85	496.75835360049916	991.5021542677983	2	496.7575378417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KDMVTQASL_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	75.65223720490533	0.11634833104049533	2				NaN	NaN	0	NaN	7323	3529	10851
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10855	30.179	NaN	15807	30	0	1748.7	0.106	+			33906	RRRVLEGPGW	10	88	613.3490701008106	1224.6835872684212	2	613.3485717773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RRRVLEGPGW_	RASAL3|p.P120Lfs*89|1|0.48|ENSG00000105122|chr19:15461577-15461577|G/-|frameshift_variant	53.08895987439943	0.42869529153390606	2				NaN	NaN	0	NaN	7324	3529	10851
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10856	30.181	NaN	21852	30	0	3653.1	0.106	+			14580	GTFSTVTSTVK	11	80	564.3008403831709	1126.5871278331417	2	564.3009033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTFSTVTSTVK_	ENSG00000182934|ENST00000332118|SRPRA;nc|ENSG00000182934|P08240-2|SRPRA	150.81021883065287	6.916300504743181E-05	2				NaN	NaN	0	NaN	7325	3529	10851
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10857	30.183	NaN	11303	30	0	2069.9	0.106	+			48299	VTEGSFVYK	9	84	515.2660789365464	1028.5176049398926	2	515.2661743164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTEGSFVYK_	ENSG00000057608|ENST00000380191|GDI2;GDI2|p.S222Afs*20|1|0.1|ENSG00000057608|chr10:5785197-5785197|T/-|frameshift_variant	87.69643885390035	0.07135982304947239	2				NaN	NaN	0	NaN	7326	3529	10851
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10858	30.184	NaN	12317	30	0	3190.2	0.036			+	45353	TVSTYVRLN	9	85	526.7905545388599	1051.5665561445196	2	526.7904663085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TVSTYVRLN_	REV__ENSG00000174145|ENST00000309447|NWD2;REV__NWD2|p.D1262Gfs*18|1|0.39|ENSG00000174145|chr4:37445769-37445770|-/G|frameshift_variant;REV__NWD2|p.E713Rfs*7|1|0.36|ENSG00000174145|chr4:37444124-37444124|G/-|frameshift_variant;REV__NWD2|p.K1317Nfs*43|1|0.35|ENSG00000174145|chr4:37445936-37445936|A/-|frameshift_variant;REV__NWD2|p.W1259Gfs*22|4|0.26|ENSG00000174145|chr4:37445757-37445757|T/-|frameshift_variant	58.78195531508484	0.22376836668196862	2				NaN	NaN	0	NaN	7327	3529	10851
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10870	30.21	NaN	8216.4	30	0	910.66	0.214	+			29333	NYSSAVQKF	9	74	522.2609790562955	1042.5074051793908	2	522.26171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NYSSAVQKF_	ENSG00000079482|ENST00000355520|OPHN1;nc|ENSG00000079482|O60890-2|OPHN1;OPHN1|p.V742Sfs*43|1|0.37|ENSG00000079482|chrX:68053746-68053747|-/G|frameshift_variant	115.49404669440601	0.023927554121326553	2				NaN	NaN	0	NaN	7336	3532	10869
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10871	30.214	NaN	7325.4	30	0	1520.5	0.106	+			4684	ATLSICSPK	9	69	460.2497423368088	918.4849317404177	2	460.2491455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATLSICSPK_	ENSG00000121060|ENST00000316881|TRIM25;ENST00000572021.5_1_17:54969063-54989474:-|nuORF;TRIM25|p.G621D|1|0.15|ENSG00000121060|chr17:56891731-56891731|C/T|missense_variant	117.81106730687013	0.02252488733980868	2				NaN	NaN	0	NaN	7337	3532	10869
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10872	30.216	NaN	10392	30	0	1999.2	0.106	+			16968	HPQPTQVQF	9	70	541.2749421630534	1080.5353313929068	2	541.27490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HPQPTQVQF_	ENSG00000172534|ENST00000310441|HCFC1;HCFC1|p.P1894Lfs*22|1|0.06|ENSG00000172534|chrX:153950835-153950835|G/-|frameshift_variant;nc|ENSG00000172534|P51610-2|HCFC1;nc|ENSG00000172534|P51610-4|HCFC1	93.1432384553994	0.056003526918089595	2				NaN	NaN	0	NaN	7338	3532	10869
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10873	30.218	NaN	9546.7	30	0	1213.2	0.106	+			45528	TYIDKSTQL	9	79	534.7825548595002	1067.5505567858004	2	534.7823486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TYIDKSTQL_	ENSG00000119965|ENST00000481909|C10orf88	76.16968421966216	0.11411088698345859	2				NaN	NaN	0	NaN	7339	3532	10869
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10874	30.22	NaN	8316.7	30	0	1283	0.106				-1	 	0	69	528.2483104255363	527.2410339589362	1	528.2492065429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7340	3532	10869
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10875	30.222	NaN	12727	30	0	1366.3	0.106			+	-1	MLKDLVRMQ	9	82	575.3118523526587	1148.6091517721172	2	575.3115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_M(Oxidation (M))LKDLVRMQ_	REV__ANKRD6|p.F672Lfs*34|1|0.4|ENSG00000135299|chr6:89630830-89630830|T/-|frameshift_variant;REV__ENSG00000135299|ENST00000339746|ANKRD6;REV__ENST00000479572.1_1_6:90331643-90337989:+|nuORF;REV__ENST00000518253.5_1_6:90312741-90340720:+|nuORF;REV__nc|ENSG00000135299|Q9Y2G4-1|ANKRD6;REV__nc|ENSG00000135299|Q9Y2G4-3|ANKRD6;REV__nc|ENSG00000135299|Q9Y2G4-4|ANKRD6	76.7741389293348	0.11149722112137898	2				NaN	NaN	0	NaN	7341	3532	10869
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10876	30.223	NaN	6694.5	30	0	914.05	0.038	+			19541	KCFLEREASD	10	79	599.2825283713516	1196.5505038095032	2	599.2821655273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KCFLEREASD_	RPS6KA6|p.S516L|1|0.11|ENSG00000072133|chrX:84104566-84104566|G/A|missense_variant	78.26377905018397	0.20980573808910843	2				NaN	NaN	0	NaN	7342	3532	10869
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10888	30.249	NaN	11842	30	0	1711.7	0.214	+			33687	RPAPVEVTY	9	80	516.2797229870049	1030.5448930408097	2	516.2797241210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RPAPVEVTY_	ENSG00000112245|ENST00000626021|PTP4A1	93.19546047674547	0.05585629608842056	2				NaN	NaN	0	NaN	7351	3535	10887
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10889	30.253	NaN	17260	30	0	2765.4	0.106	+			40735	SVCVLDLRK	9	74	545.3076745302101	1088.60079612722	2	545.3085327148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SVC(Carbamidomethyl (C))VLDLRK_	ENSG00000101849|ENST00000645353|TBL1X;ENSG00000177565|ENST00000457928|TBL1XR1;nc|ENSG00000101849|O60907-2|TBL1X;TBL1X|p.G568S|1|0.45|ENSG00000101849|chrX:9714998-9714998|G/A|missense_variant	104.0567914643314	0.03506238181059741	2				NaN	NaN	0	NaN	7352	3535	10887
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10890	30.255	NaN	8405	30	0	1732.9	0.106	+			42718	TDFQTHTSL	9	79	525.2487721856384	1048.4829914380766	2	525.2491455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TDFQTHTSL_	ENSG00000144589|ENST00000456909|STK11IP;ENST00000475396.5_1_2:220462865-220474366:+|nuORF;STK11IP|p.E522Rfs*80|1|0.11|ENSG00000144589|chr2:219608354-219608354|G/-|frameshift_variant;STK11IP|p.L552Cfs*50|1|0.22|ENSG00000144589|chr2:219608596-219608596|C/-|frameshift_variant	158.07458414430337	0.004987072822166904	2				NaN	NaN	0	NaN	7353	3535	10887
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10891	30.257	NaN	8923	30	0	568.05	0.106	+			27088	MALQQILW	8	81	501.7766770337127	NaN	0	501.7767639160156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MALQQILW_	ENST00000566814.1_1_22:26909701-26909914:+|nuORF	52.29916861842294	1.7418937515398478	2				NaN	NaN	0	NaN	7354	3535	10887
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10892	30.259	NaN	6951.1	30	0	1122.3	0.106	+			29348	NYVKKFQSF	9	76	580.8073230111322	1159.6000930890643	2	580.8070678710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NYVKKFQSF_	ENSG00000109536|ENST00000226798|FRG1;ENST00000278882.8_1_20:29623179-29633907:+|nuORF	37.81151784470057	0.4459294069877048	2				NaN	NaN	0	NaN	7355	3535	10887
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10893	30.26	NaN	5498.5	30	0	661.93	0.106	+			12059	GAAFLQIPAE	10	73	508.7741197829684	1015.5336866327368	2	508.7740478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GAAFLQIPAE_	ENSG00000170379|ENST00000684770|TCAF2;ENSG00000198420|ENST00000479870|TCAF1;ENSG00000283528|ENST00000636941|TCAF2C;ENST00000392900.3_1_7:143551228-143582358:-|nuORF;ENST00000414990.2_3_7:143295168-143301929:+|nuORF;nc|ENSG00000170379|A6NFQ2-2|TCAF2;nc|ENSG00000170379|A6NFQ2-3|TCAF2;nc|ENSG00000198420|Q9Y4C2-2|TCAF1;TCAF2|p.A897Sfs*3|1|0.09|ENSG00000170379|chr7:143727595-143727596|-/TCAA|frameshift_variant	42.396135135203025	0.5270658956260207	2				NaN	NaN	0	NaN	7356	3535	10887
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10894	30.262	NaN	7321.7	30	0	3458.9	0.036	+			48800	VVAAVIWRK	9	53	347.89022206512027	1040.6488367955608	3	347.8905029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VVAAVIWRK_	ENSG00000204592|ENST00000376630|HLA-E	58.78195531508484	0.22376836668196862	2				NaN	NaN	0	NaN	7357	3535	10887
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10905	30.288	NaN	8564.8	30	0	548.99	0.214	+			48801	VVAAVIWRK	9	70	521.3322414114843	1040.6499298897686	2	521.3322143554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVAAVIWRK_	ENSG00000204592|ENST00000376630|HLA-E	90.36981228632155	0.0638227155548745	2				NaN	NaN	0	NaN	7365	3538	10904
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10906	30.291	NaN	8546	30	0	1132	0.106	+			3792	ATAGFTIGR	9	79	447.24552257374694	892.4764922142939	2	447.2455749511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATAGFTIGR_	ENSG00000184634|ENST00000374080|MED12;MED12|p.E1337Kfs*8|1|0.26|ENSG00000184634|chrX:71130173-71130173|G/-|frameshift_variant;nc|ENSG00000184634|Q93074-2|MED12;nc|ENSG00000184634|Q93074-3|MED12	136.26810882979174	0.012230845423532208	2				NaN	NaN	0	NaN	7366	3538	10904
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10907	30.293	NaN	7277.8	30	0	1524.6	0.106				-1	CCCRCCWRGLW	11	78	723.2792493907499	1444.5439458482997	2	723.2772827148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_CCC(Carbamidomethyl (C))RCCWRGLW_	ENST00000264187.6_1_1:236228291-236228420:-|nuORF	14.137123925751023	0.8042936413770803	2				NaN	NaN	0	NaN	7367	3538	10904
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10908	30.295	NaN	6236.5	30	0	1658.1	0.106	+			30832	QEETNFKSL	9	76	548.2695182199564	1094.5244835067126	2	548.2703247070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QEETNFKSL_	ENSG00000113810|ENST00000357388|SMC4;ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4;SMC4|p.K628Nfs*23|1|0.11|ENSG00000113810|chr3:160420762-160420762|A/-|frameshift_variant	51.19269402634007	0.2889735674168909	2				NaN	NaN	0	NaN	7368	3538	10904
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10909	30.297	NaN	6450.8	30	0	628.76	0.106	+			27006	LYQRAFQHL	9	73	588.3197292231595	1174.6249055131188	2	588.3201293945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LYQRAFQHL_	ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC;PRKDC|p.K3681Nfs*6|1|0.32|ENSG00000253729|chr8:47785174-47785177|TTCT/-|frameshift_variant;PRKDC|p.M3670*|1|0.5|ENSG00000253729|chr8:47785212-47785212|T/-|frameshift_variant;PRKDC|p.M3846Cfs*12|1|0.13|ENSG00000253729|chr8:47779047-47779047|T/-|frameshift_variant;PRKDC|p.M4020Cfs*2|1|0.31|ENSG00000253729|chr8:47776968-47776968|T/-|frameshift_variant;PRKDC|p.N3605Kfs*3|1|0.22|ENSG00000253729|chr8:47788993-47788994|-/T|frameshift_variant;PRKDC|p.N4037Ifs*15|1|0.17|ENSG00000253729|chr8:47776916-47776916|T/-|frameshift_variant;PRKDC|p.S3402Ifs*16|1|0.04|ENSG00000253729|chr8:47799302-47799303|-/AAACCGTGAGTTAGAGGAGGTAA|frameshift_variant;PRKDC|p.S4099Qfs*6|1|0.25|ENSG00000253729|chr8:47774265-47774265|A/-|frameshift_variant;PRKDC|p.W3401Cfs*4|1|0.01|ENSG00000253729|chr8:47799304-47799305|-/AATGAATA|frameshift_variant	79.71258880314673	0.09879134589249085	2				NaN	NaN	0	NaN	7369	3538	10904
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10910	30.299	NaN	5505.8	30	0	916.92	0.106				-1	EEFPNTCKM	9	64	578.244377011308	1154.4742010894158	2	578.2447509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_EEFPNTC(Carbamidomethyl (C))KM_	ENSG00000102910|ENST00000285737|LONP2;LONP2|p.D678Efs*7|1|0.07|ENSG00000102910|chr16:48347601-48347602|-/GT|frameshift_variant;nc|ENSG00000102910|Q86WA8-2|LONP2	85.16082228582465	0.07850854922700509	2				NaN	NaN	0	NaN	7370	3538	10904
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10911	30.301	NaN	3354.4	30	0	620.5	0.033			+	7948	DSLRVATI	8	60	437.7530878409543	873.4916227487087	2	437.7530212402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DSLRVATI_	REV__ENSG00000103154|ENST00000305202|NECAB2;REV__nc|ENSG00000103154|Q7Z6G3-2|NECAB2	49.44154591367651	0.597725784090933	2				NaN	NaN	0	NaN	7371	3538	10904
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10925	30.33	NaN	57864	30	0	15685	0.215	+			29755	PHSPPGIP	8	78	401.21639905556685	800.4182451779337	2	401.2161865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PHSPPGIP_	ENST00000492715.1_1_X:48457171-48457486:+|nuORF	83.28718786952967	0.2977916691876266	2				NaN	NaN	0	NaN	7382	3541	10924
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10926	30.334	NaN	21380	30	0	2151.1	0.106	+			10814	FANDANKVL	9	88	496.26357263855124	990.5125923439025	2	496.2635803222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FANDANKVL_	ENSG00000123104|ENST00000381340|ITPR2;ITPR2|p.D636Afs*14|1|0.07|ENSG00000123104|chr12:26658110-26658111|-/AATGG|frameshift_variant;ITPR2|p.F471Lfs*2|1|0.21|ENSG00000123104|chr12:26666048-26666048|A/-|frameshift_variant;ITPR2|p.K1802Sfs*13|2|0.65|ENSG00000123104|chr12:26487217-26487217|T/-|frameshift_variant;ITPR2|p.L1313Ffs*10|1|0.43|ENSG00000123104|chr12:26599208-26599209|-/A|frameshift_variant;ITPR2|p.L479Ffs*33|1|0.04|ENSG00000123104|chr12:26666026-26666027|-/GGAACAAA|frameshift_variant;ITPR2|p.N1390Mfs*17|1|0.07|ENSG00000123104|chr12:26596973-26596973|C/-|frameshift_variant;ITPR2|p.N858Kfs*2|1|0.38|ENSG00000123104|chr12:26655723-26655724|-/T|frameshift_variant;ITPR2|p.R1837Gfs*7|1|0.09|ENSG00000123104|chr12:26487113-26487113|T/-|frameshift_variant;ITPR2|p.R1837Kfs*4|1|0.24|ENSG00000123104|chr12:26487112-26487113|-/T|frameshift_variant	78.26377905018397	0.10505600812668463	2				NaN	NaN	0	NaN	7383	3541	10924
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10927	30.336	NaN	8520.9	30	0	747.33	0.106	+			25181	LMAAEVEQGG	10	75	502.7375353456919	NaN	0	502.73748779296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LMAAEVEQGG_	BAHCC1|p.G851Rfs*223|1|0.43|ENSG00000266074|chr17:81444699-81444700|-/C|frameshift_variant;BAHCC1|p.H888Pfs*186|1|0.24|ENSG00000266074|chr17:81444811-81444812|-/C|frameshift_variant;BAHCC1|p.H888Tfs*86|1|0.31|ENSG00000266074|chr17:81444812-81444812|C/-|frameshift_variant;BAHCC1|p.P2034Lfs*15|1|0.65|ENSG00000266074|chr17:81460375-81460375|C/-|frameshift_variant;BAHCC1|p.R1605Afs*107|1|0.22|ENSG00000266074|chr17:81456436-81456436|C/-|frameshift_variant;BAHCC1|p.S1322Afs*42|1|0.44|ENSG00000266074|chr17:81447737-81447737|C/-|frameshift_variant;BAHCC1|p.S1322Qfs*8|1|0.45|ENSG00000266074|chr17:81447736-81447737|-/C|frameshift_variant;ENSG00000266074|ENST00000675386|BAHCC1;nc|ENSG00000266074|Q9P281|BAHCC1	60.11826168202944	0.2333124524861241	2				NaN	NaN	0	NaN	7384	3541	10924
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10928	30.338	NaN	12876	30	0	1314.7	0.106	+			19098	IYKCVNTTL	9	76	556.2943630098736	1110.574173086547	2	556.2947998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_IYKC(Carbamidomethyl (C))VNTTL_	ENSG00000131236|ENST00000372805|CAP1;ENST00000461993.1_1_1:40535258-40537202:+|nuORF;nc|ENSG00000131236|Q01518-2|CAP1	150.36159442982594	0.006784847064083231	2				NaN	NaN	0	NaN	7385	3541	10924
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10929	30.339	NaN	13574	30	0	1477.9	0.106	+			2636	AQINSVFNK	9	81	510.7771128985706	1019.5396728639412	2	510.77716064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AQINSVFNK_	ENSG00000117597|ENST00000491415|UTP25	68.84614121027924	0.14577793175421136	2				NaN	NaN	0	NaN	7386	3541	10924
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10930	30.341	NaN	7706.1	30	0	410.8	0.041	+			41970	SVWLQELLWEY	11	93	733.3704219445385	1464.726290955877	2	733.367431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVWLQELLWEY_	ENST00000360688.3_1_16:30124309-30124839:-|nuORF;ENST00000406256.7_1_16:30124039-30124872:-|nuORF	80.91624569148213	0.14473443340275	2				NaN	NaN	0	NaN	7387	3541	10924
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10931	30.342	NaN	11867	30	0	1262.6	0.141	+			38545	SSEILNKL	8	72	452.26084784588744	902.5071427585749	2	452.25958251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSEILNKL_	DLG5|p.F1661Ifs*9|1|0.12|ENSG00000151208|chr10:77805849-77805850|-/C|frameshift_variant;DLG5|p.P1167Rfs*16|1|0.62|ENSG00000151208|chr10:77819921-77819921|G/-|frameshift_variant;DLG5|p.P861Qfs*32|1|0.31|ENSG00000151208|chr10:77821902-77821902|G/-|frameshift_variant;ENSG00000151208|ENST00000372391|DLG5;nc|ENSG00000151208|Q8TDM6-2|DLG5;nc|ENSG00000151208|Q8TDM6-4|DLG5	82.30502934623384	0.30436709589983096	2				NaN	NaN	0	NaN	7388	3541	10924
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10944	30.372	NaN	18671	30	0	2635.9	0.214	+			1028	AEKLGGSAVI	10	79	472.77422129970074	943.5338896662015	2	472.7738037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEKLGGSAVI_	ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65622809-65623088:-|nuORF	92.23892857375223	0.11825556496531454	2				NaN	NaN	0	NaN	7398	3544	10943
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10945	30.375	NaN	21112	30	0	2919.1	0.106	+			14497	GTCLLIANK	9	75	495.2758440524484	988.5371351716968	2	495.27593994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GTC(Carbamidomethyl (C))LLIANK_	CARM1|p.I452Sfs*12|1|0.18|ENSG00000142453|chr19:10920679-10920683|TTGTG/-|frameshift_variant;ENSG00000142453|ENST00000327064|CARM1;nc|ENSG00000142453|Q86X55-1|CARM1	118.74307786436346	0.02196067127630568	2				NaN	NaN	0	NaN	7399	3544	10943
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10946	30.377	NaN	8984.3	30	0	4973.9	0.106	+			48009	VSQTLNKVA	9	63	480.2794078622141	958.5442627912282	2	480.27935791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSQTLNKVA_	ENSG00000157796|ENST00000399820|WDR19;ENST00000512448.1_1_4:39201144-39207357:+|nuORF;nc|ENSG00000157796|Q8NEZ3-2|WDR19;WDR19|p.N1166Mfs*5|1|0.21|ENSG00000157796|chr4:39272989-39272989|A/-|frameshift_variant	32.81241826257853	0.4965981579233955	2				NaN	NaN	0	NaN	7400	3544	10943
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10947	30.379	NaN	7408.8	30	0	1010.1	0.106			+	37188	SIYTNNFNDE	10	81	608.7581772549763	1215.5018015767525	2	608.7581176757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SIYTNNFNDE_	REV__ENSG00000143545|ENST00000368575|RAB13;REV__ENST00000462680.5_1_1:153955993-153958658:-|nuORF;REV__ENST00000495720.5_1_1:153958496-153958682:-|nuORF	35.17822180527639	0.5925517082438457	2				NaN	NaN	0	NaN	7401	3544	10943
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10948	30.381	NaN	7291.3	30	0	816.95	0.106				-1	KDNNREEM	8	80	526.2276572495921	1050.440761565984	2	526.2278442382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_KDNNREEM(Oxidation (M))_	DOCK2|p.M1388Gfs*7|1|0.05|ENSG00000134516|chr5:170050344-170050345|-/AGGATGCTCATTAGAGATTT|frameshift_variant;DOCK2|p.N1321Kfs*10|1|0.37|ENSG00000134516|chr5:170045899-170045900|-/A|frameshift_variant;ENSG00000134516|ENST00000520908|DOCK2;ENST00000523351.5_1_5:169188379-169509859:+|nuORF	44.116797842482775	0.6307669463330267	2				NaN	NaN	0	NaN	7402	3544	10943
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10949	30.383	NaN	4703.9	30	0	773.36	0.106			+	7452	DFKTRDAV	8	68	476.24802637103323	NaN	0	476.2479553222656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DFKTRDAV_	REV__ENSG00000090989|ENST00000381295|EXOC1;REV__ENST00000504321.1_1_4:56755058-56759725:+|nuORF;REV__ENST00000511971.5_1_4:56749994-56766742:+|nuORF;REV__EXOC1|p.D504N|1|0.06|ENSG00000090989|chr4:55890357-55890357|G/A|missense_variant;REV__EXOC1|p.E754Kfs*18|1|0.25|ENSG00000090989|chr4:55899799-55899799|A/-|frameshift_variant;REV__EXOC1|p.G824Vfs*2|5|0.15|ENSG00000090989|chr4:55902469-55902469|A/-|frameshift_variant;REV__EXOC1|p.K777Nfs*2|1|0.37|ENSG00000090989|chr4:55899874-55899874|A/-|frameshift_variant;REV__nc|ENSG00000090989|Q9NV70-2|EXOC1	53.351449002276354	1.7418937515398478	2				NaN	NaN	0	NaN	7403	3544	10943
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10950	30.385	NaN	2973.7	30	0	530.62	0.032			+	33727	RPGVLNGA	8	60	392.22841459766335	782.4422762621267	2	392.2286071777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RPGVLNGA_	REV__ENSG00000147465|ENST00000276449|STAR;REV__ENST00000520114.1_1_8:38003479-38005900:-|nuORF	25.450171626174864	0.7628259754767981	2				NaN	NaN	0	NaN	7404	3544	10943
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10961	30.41	NaN	44739	30	0	10482	0.214	+			39958	STMGYMMAK	9	95	510.2213227156089	1018.4280924980178	2	510.22216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STMGYMMAK_	ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;ENST00000518337.1_1_8:74128289-74128592:-|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P	153.03582135801034	0.006161527642367307	2				NaN	NaN	0	NaN	7412	3547	10960
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10962	30.413	NaN	17389	30	0	2110	0.106	+			8579	EAYPDHTQF	9	89	554.2408776446962	1106.4672023561923	2	554.2411499023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EAYPDHTQF_	ENSG00000151500|ENST00000341541|THYN1;ENST00000533975.1_1_11:134119036-134122923:-|nuORF;nc|ENSG00000151500|Q9P016-2|THYN1;THYN1|p.N194Ifs*15|2|0.22|ENSG00000151500|chr11:134248859-134248859|T/-|frameshift_variant	101.60071028292904	0.0375685401170269	2				NaN	NaN	0	NaN	7413	3547	10960
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10963	30.415	NaN	10323	30	0	1426.5	0.106				-1	 	0	88	336.53411418053076	1006.5805131417924	3	336.53424072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7414	3547	10960
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10964	30.417	NaN	7104.2	30	0	2319.5	0.106	+			39218	STAGLIIGK	9	71	430.2659675923084	858.5173822514168	2	430.2657775878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STAGLIIGK_	ENSG00000104967|ENST00000263257|NOVA2;ENSG00000139910|ENST00000539517|NOVA1;nc|ENSG00000139910|P51513-5|NOVA1	93.19546047674547	0.05585629608842056	2				NaN	NaN	0	NaN	7415	3547	10960
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10965	30.419	NaN	9806.6	30	0	646.46	0.106	+			1113	AELKSSTVGL	10	79	502.7844215191303	1003.5542901050607	2	502.78448486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AELKSSTVGL_	ENSG00000071859|ENST00000393600|FAM50A;ENSG00000145945|ENST00000648326|FAM50B;ENST00000481619.5_1_X:153672624-153677371:+|nuORF	72.2432373244024	0.2589930451692646	2				NaN	NaN	0	NaN	7416	3547	10960
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10966	30.421	NaN	5335.8	30	0	707.48	0.106				-1	RDPRLCPGAGV	11	79	599.3118726392571	1196.609192345314	2	599.3121948242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_RDPRLC(Carbamidomethyl (C))PGAGV_	ENST00000553142.5_1_12:58026631-58026883:-|nuORF	49.536043120802724	0.4274608637932522	2				NaN	NaN	0	NaN	7417	3547	10960
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10967	30.423	NaN	3628.7	30	0	666.04	0.034			+	42820	TEARRHAQ	8	64	484.75325555401844	967.4919581748369	2	484.75286865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TEARRHAQ_	REV__ENSG00000121361|ENST00000240662|KCNJ8;REV__ENSG00000187486|ENST00000339994|KCNJ11;REV__nc|ENSG00000187486|Q14654-2|KCNJ11	31.954861631926434	0.7126016770032289	2				NaN	NaN	0	NaN	7418	3547	10960
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10981	30.452	NaN	33811	30	0	4511	0.214	+			20517	KFIDTTSKF	9	89	543.794929758487	1085.575306583774	2	543.79541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KFIDTTSKF_	ENSG00000100316|ENST00000216146|RPL3;ENSG00000140986|ENST00000268661|RPL3L;ENST00000417615.1_1_14:99439218-99439536:-|nuORF;ENST00000473638.5_1_22:39708982-39709710:-|nuORF	164.45504665044191	0.003713414289755139	2				NaN	NaN	0	NaN	7429	3550	10980
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10982	30.455	NaN	15677	30	0	9507	0.106			+	46663	VGFIQRSKST	10	73	561.8162814962376	1121.618010059275	2	561.8165893554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VGFIQRSKST_	REV__ENSG00000168658|ENST00000477737|VWA3B;REV__ENST00000409460.5_1_2:98703705-98907168:+|nuORF;REV__ENST00000432242.5_1_2:98736050-98809363:+|nuORF;REV__nc|ENSG00000168658|Q502W6-2|VWA3B;REV__nc|ENSG00000168658|Q502W6-6|VWA3B;REV__nc|ENSG00000168658|Q502W6-8|VWA3B;REV__VWA3B|p.V268Ifs*3|1|0.06|ENSG00000168658|chr2:98128336-98128337|-/GATCTCTT|frameshift_variant	23.52269567125451	0.6877354443478558	2				NaN	NaN	0	NaN	7430	3550	10980
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10983	30.457	NaN	10878	30	0	1128.9	0.106	+			45927	VAQSTRIIY	9	79	525.8008977474803	1049.5872425617606	2	525.8006591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VAQSTRIIY_	ENSG00000111669|ENST00000396705|TPI1;nc|ENSG00000111669|P60174-3|TPI1;nc|ENSG00000111669|P60174-4|TPI1	54.722347961057174	0.257609425301511	2				NaN	NaN	0	NaN	7431	3550	10980
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10984	30.459	NaN	34525	30	0	17667	0.106			+	11181	FGVGFVSVEK	10	102	356.86211686179445	1067.5645211855833	3	356.8623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FGVGFVSVEK_	REV__tr|U7SX00|U7SX00_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01231PE=4SV=1	32.81241826257853	0.6118718159329168	2				NaN	NaN	0	NaN	7432	3550	10980
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10985	30.461	NaN	5448.7	30	0	981.09	0.106	+			24219	LERTGYTL	8	63	476.75812482715315	951.5016967211063	2	476.758056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LERTGYTL_	ENSG00000125944|ENST00000302271|HNRNPR;ENSG00000135316|ENST00000369622|SYNCRIP;HNRNPR|p.L367Qfs*19|1|0.05|ENSG00000125944|chr1:23313620-23313621|-/TTTAATCTCT|frameshift_variant;HNRNPR|p.W594Gfs*15|1|0.23|ENSG00000125944|chr1:23310575-23310576|CA/-|frameshift_variant;nc|ENSG00000125944|O43390-2|HNRNPR;nc|ENSG00000125944|O43390-4|HNRNPR;nc|ENSG00000271793|O60506-2|SYNCRIP;nc|ENSG00000271793|O60506-3|SYNCRIP;nc|ENSG00000271793|O60506-4|SYNCRIP	60.11826168202944	0.5006107059937851	2				NaN	NaN	0	NaN	7433	3550	10980
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10986	30.463	NaN	12257	30	0	7399.5	0.037			+	36900	SIHLGNKLSW	10	64	577.8195201966123	1153.6244874600245	2	577.8194580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SIHLGNKLSW_	REV__ENSG00000163935|ENST00000394752|SFMBT1;REV__nc|ENSG00000163935|Q9UHJ3-2|SFMBT1;REV__SFMBT1|p.A664Pfs*50|1|0.1|ENSG00000163935|chr3:52907651-52907651|T/-|frameshift_variant;REV__SFMBT1|p.K735Sfs*45|1|0.37|ENSG00000163935|chr3:52907196-52907196|T/-|frameshift_variant	30.568863376406313	0.6301935916953115	2				NaN	NaN	0	NaN	7434	3550	10980
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10987	30.463	NaN	7372.6	30	0	1660.9	0.143				-1	 	0	69	333.8898439443735	998.6477024333205	3	333.8900451660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7435	3550	10980
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	10999	30.491	NaN	51350	30	0	9529.5	0.214	+			23310	KYQAVTATL	9	75	497.78198600870934	993.5494190842187	2	497.7816467285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KYQAVTATL_	ENSG00000142541|ENST00000391857|RPL13A;ENST00000425147.1_1_21:26734448-26734742:+|nuORF;ENST00000478813.1_1_8:81177882-81177960:-|nuORF;nc|ENSG00000293056|Q6NVV1|RPL13AP3	154.1183686248401	0.005909203230691971	2				NaN	NaN	0	NaN	7444	3553	10998
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11000	30.495	NaN	38678	30	0	10777	0.106	+			44735	TTLTSQYIK	9	81	527.7925249314151	1053.57049692963	2	527.7925415039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTLTSQYIK_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	150.36159442982594	0.006784847064083231	2				NaN	NaN	0	NaN	7445	3553	10998
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11001	30.497	NaN	30238	30	0	12945	0.106			+	-1	MIKRTEKE	8	100	350.8585870546629	1049.5539317641887	3	350.8587341308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))IKRTEKE_	REV__ENSG00000164776|ENST00000297373|PHKG1;REV__ENST00000471665.1_1_7:56150908-56151407:-|nuORF;REV__nc|ENSG00000164776|Q16816-2|PHKG1	68.78682469695295	0.41700713582915416	2				NaN	NaN	0	NaN	7446	3553	10998
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11002	30.499	NaN	25326	30	0	2418.9	0.106	+			12817	GENADSQIKL	10	85	537.7749688868896	1073.5353848405791	2	537.7749633789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GENADSQIKL_	ENSG00000189060|ENST00000340857|H1-0;nc|ENSG00000189060|P07305-2|H1-0	128.3478880297481	0.01553957493207534	2				NaN	NaN	0	NaN	7447	3553	10998
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11003	30.501	NaN	10274	30	0	963.7	0.106	+			46369	VEKVPNPSL	9	71	491.78200552558997	981.54945811798	2	491.78167724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VEKVPNPSL_	ENSG00000225663|ENST00000455127|MCRIP1;ENST00000575090.1_1_17:79781125-79781671:-|nuORF;ENST00000576679.1_2_17:79781125-79782334:-|nuORF	72.2432373244024	0.13108886737667413	2				NaN	NaN	0	NaN	7448	3553	10998
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11004	30.502	NaN	12449	30	0	1250.4	0.106	+			43460	TGNPTVIKM	9	77	480.76188726063174	959.5092215880635	2	480.762451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TGNPTVIKM_	ENSG00000140575|ENST00000268182|IQGAP1;ENSG00000145703|ENST00000274364|IQGAP2;ENST00000512383.1_1_5:75964652-75969784:+|nuORF;IQGAP1|p.S1529Afs*10|1|0.15|ENSG00000140575|chr15:90492665-90492665|A/-|frameshift_variant;IQGAP2|p.Q1499Rfs*15|1|0.05|ENSG00000145703|chr5:76701201-76701202|-/CCGAG|frameshift_variant;nc|ENSG00000145703|Q13576-2|IQGAP2;nc|ENSG00000145703|Q13576-3|IQGAP2	93.5975768576971	0.05472259948179787	2				NaN	NaN	0	NaN	7449	3553	10998
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11005	30.504	NaN	39204	30	0	17538	0.037	+			20519	KFIDTTSKF	9	69	362.8656786934665	1085.5752066805996	3	362.86572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KFIDTTSKF_	ENSG00000100316|ENST00000216146|RPL3;ENSG00000140986|ENST00000268661|RPL3L;ENST00000417615.1_1_14:99439218-99439536:-|nuORF;ENST00000473638.5_1_22:39708982-39709710:-|nuORF	36.446750945000026	0.4619375763483977	2				NaN	NaN	0	NaN	7450	3553	10998
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11017	30.53	NaN	63240	30	0	4583	0.213	+			30738	QDLKTELLQR	10	100	622.3536052261544	1242.6926575191087	2	622.3539428710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QDLKTELLQR_	EEA1|p.K257Nfs*13|2|0.34|ENSG00000102189|chr12:92851138-92851138|T/-|frameshift_variant;EEA1|p.N1389Mfs*3|1|0.33|ENSG00000102189|chr12:92776081-92776081|T/-|frameshift_variant;ENSG00000102189|ENST00000322349|EEA1	131.115847015877	0.013122790858444951	2				NaN	NaN	0	NaN	7459	3556	11016
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11018	30.534	NaN	31313	30	0	8030.8	0.106	+			43170	TETIERLQ	8	78	495.26709832601335	988.5196437188267	2	495.2672424316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TETIERLQ_	ENSG00000109089|ENST00000337231|CDR2L	90.36981228632155	0.27635063874291205	2				NaN	NaN	0	NaN	7460	3556	11016
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11019	30.536	NaN	31708	30	0	3531.7	0.106			+	-1	RPRASSACSAG	11	89	560.2693590488441	1118.524165164488	2	560.2696533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_RPRASSAC(Carbamidomethyl (C))SAG_	REV__ENST00000599380.5_1_19:17581362-17608411:+|nuORF	63.53385203322761	0.2919106290768168	2				NaN	NaN	0	NaN	7461	3556	11016
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11020	30.538	NaN	11245	30	0	1226.8	0.106	+			22995	KVSDYILQH	9	78	551.798204366531	1101.5818557998618	2	551.7985229492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KVSDYILQH_	ENSG00000148219|ENST00000313400|ASTN2;nc|ENSG00000148219|O75129-2|ASTN2;nc|ENSG00000148219|O75129-3|ASTN2;nc|ENSG00000148219|O75129-4|ASTN2;nc|ENSG00000148219|O75129-6|ASTN2	114.8945686534367	0.024290463251177924	2				NaN	NaN	0	NaN	7462	3556	11016
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11021	30.54	NaN	12044	30	0	2557.2	0.106			+	32586	QYEQLIKF	8	75	534.7899377417039	1067.5653225502076	2	534.7901611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QYEQLIKF_	REV__ENSG00000115419|ENST00000320717|GLS	60.97194046774394	0.49215940876911696	2				NaN	NaN	0	NaN	7463	3556	11016
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11022	30.541	NaN	17940	30	0	3275.7	0.106	+			50331	WTYLTGIQE	9	77	555.7748673489626	NaN	0	555.7748413085938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_WTYLTGIQE_	ARSJ|p.N431Mfs*86|1|0.09|ENSG00000180801|chr4:113902782-113902782|T/-|frameshift_variant;ARSJ|p.P469Lfs*48|1|0.31|ENSG00000180801|chr4:113902668-113902668|G/-|frameshift_variant	47.657333605630114	0.2228375344433429	2				NaN	NaN	0	NaN	7464	3556	11016
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11023	30.543	NaN	8118.1	30	0	844.62	0.035	+			36567	SFSEAHSEF	9	74	520.7195023741449	1039.4244518150897	2	520.7198486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SFSEAHSEF_	ENSG00000167004|ENST00000300289|PDIA3;ENST00000434494.5_1_15:44038867-44063413:+|nuORF;ENST00000471856.1_1_1:146649692-146651075:+|nuORF	102.7733458925114	0.03637199559902695	2				NaN	NaN	0	NaN	7465	3556	11016
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11037	30.573	NaN	15098	30	0	1646.7	0.214	+			12493	GEEGDLKTSL	10	82	524.7615986748464	1047.5086444164926	2	524.7613525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEEGDLKTSL_	ENSG00000066135|ENST00000372396|KDM4A;KDM4A|p.K699Sfs*7|1|0.06|ENSG00000066135|chr1:43690902-43690902|A/-|frameshift_variant	122.93914200107957	0.02317863035582428	2				NaN	NaN	0	NaN	7476	3559	11036
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11038	30.576	NaN	8749.4	30	0	995.83	0.106	+			46177	VDVSGPKL	8	70	407.7372926172381	813.4600323012762	2	407.7368469238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VDVSGPKL_	AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK;ENSG00000124942|ENST00000378024|AHNAK	104.74654710444128	0.24806011021879068	2				NaN	NaN	0	NaN	7477	3559	11036
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11039	30.578	NaN	8513	30	0	879.19	0.106	+			2652	AQLPVIENK	9	76	506.2951991711376	1010.5758454090752	2	506.2949523925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AQLPVIENK_	ENSG00000122194|ENST00000308192|PLG	39.252832667884924	0.4290233611298554	2				NaN	NaN	0	NaN	7478	3559	11036
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11040	30.58	NaN	9458.9	30	0	2705.2	0.106			+	41472	SVNQKPHAG	9	65	469.24439782960445	936.4742427260089	2	469.2431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVNQKPHAG_	REV__ENSG00000131849|ENST00000254166|ZNF132	47.91560031466742	0.327412564698279	2				NaN	NaN	0	NaN	7479	3559	11036
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11041	30.582	NaN	11378	30	0	1951.2	0.106			+	7704	DLNIWCPSEHK	11	71	671.3148840793099	1340.6152152254197	2	671.3140869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DLNIWCPSEHK_	REV__ENST00000456917.1_1_21:26946409-26946478:+|nuORF	31.634271133179894	0.6579734920221648	2				NaN	NaN	0	NaN	7480	3559	11036
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11042	30.584	NaN	6779.7	30	0	568.45	0.035			+	18611	ISSEFLPKG	9	68	489.2698203589316	976.5250877846632	2	489.2699279785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ISSEFLPKG_	REV__ENSG00000109685|ENST00000508803|NSD2;REV__ENST00000508355.5_1_4:1902372-1920392:+|nuORF;REV__nc|ENSG00000109685|O96028-3|NSD2;REV__nc|ENSG00000109685|O96028-5|NSD2;REV__nc|ENSG00000109685|O96028-6|NSD2;REV__nc|ENSG00000109685|O96028-7|NSD2	61.691277971877994	0.19951612995419254	2				NaN	NaN	0	NaN	7481	3559	11036
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11043	30.584	NaN	6842.3	30	0	842.9	0.143	+			27718	MQKYDFSFY	9	78	614.7709066121192	1227.5272602910384	2	614.7702026367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MQKYDFSFY_	SLC16A14|p.T467M|1|0.52|ENSG00000163053|chr2:230037513-230037513|G/A|missense_variant	42.396135135203025	0.392153681582562	2				NaN	NaN	0	NaN	7482	3559	11036
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11058	30.617	NaN	15159	30	0	1980.8	0.214	+			23432	LADDSVRSL	9	82	488.2589647435719	974.5033765539438	2	488.2590026855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LADDSVRSL_	ENSG00000138078|ENST00000409411|PREPL;nc|ENSG00000138078|Q4J6C6-2|PREPL;nc|ENSG00000138078|Q4J6C6|PREPL	83.6470233535746	0.08277643980271215	2				NaN	NaN	0	NaN	7494	3562	11057
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11059	30.621	NaN	11922	30	0	1664.3	0.106	+			11749	FSHNGMAL	8	72	438.7052040893646	NaN	0	438.7052001953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FSHNGMAL_	ENSG00000144320|ENST00000272748|LNPK;nc|ENSG00000144320|Q9C0E8-2|LNPK;nc|ENSG00000144320|Q9C0E8-3|LNPK;nc|ENSG00000144320|Q9C0E8-4|LNPK	99.37495909608758	1.7418937515398478	2				NaN	NaN	0	NaN	7495	3562	11057
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11060	30.623	NaN	9944	30	0	1499.1	0.106	+			36218	SELTQPKL	8	77	458.26071771347193	914.5068824937439	2	458.26116943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SELTQPKL_	ENSG00000197601|ENST00000354817|FAR1;ENST00000524933.1_1_11:13716477-13732426:+|nuORF	139.97047562133406	0.25797680915057813	2				NaN	NaN	0	NaN	7496	3562	11057
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11061	30.625	NaN	9827.3	30	0	2949.7	0.106	+			38049	SPQRGLAL	8	62	421.24834176912435	840.4821306050487	2	421.24847412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SPQRGLAL_	ZNF516|p.M844Cfs*131|1|0.2|ENSG00000101493|chr18:76379585-76379585|C/-|frameshift_variant	51.33545320467046	0.5859736979383976	2				NaN	NaN	0	NaN	7497	3562	11057
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11062	30.627	NaN	35978	30	0	2476.2	0.106	+			13005	GEVDVEQHTL	10	92	563.7732164735029	NaN	0	563.7758178710938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GEVDVEQHTL_	ENSG00000134057|ENST00000256442|CCNB1;ENSG00000157456|ENST00000288207|CCNB2;nc|ENSG00000134057|P14635-2|CCNB1	157.3448221729694	2.3527420784610545E-05	2				NaN	NaN	0	NaN	7498	3562	11057
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11063	30.628	NaN	9815.3	30	0	2201.7	0.038	+			7554	DHSAIPVINWA	11	69	611.8148150008876	1221.6150770685751	2	611.8150634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DHSAIPVINWA_	ANPEP|p.R658W|1|0.14|ENSG00000166825|chr15:89799297-89799297|G/A|missense_variant	69.6276240434122	0.23884409287757344	2				NaN	NaN	0	NaN	7499	3562	11057
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11064	30.629	NaN	10241	30	0	1410.9	0.141			+	-1	MYFGWIQL	8	79	537.2609833572665	1072.5074137813328	2	537.2611694335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_M(Oxidation (M))YFGWIQL_	REV__ENST00000443035.7_1_15:66044937-66048577:-|nuORF	35.200714571348534	0.6875396545722289	2				NaN	NaN	0	NaN	7500	3562	11057
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11082	30.668	NaN	46738	30	0	12585	0.214	+			42027	SVYVYKVLK	9	86	549.8316410595316	1097.6487291858632	2	549.8316040039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVYVYKVLK_	ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;nc|ENSG00000203814|Q5QNW6-2|H2BC18	128.60217544463768	0.015992218256422188	2				NaN	NaN	0	NaN	7515	3565	11081
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11083	30.672	NaN	13911	30	0	2098	0.106	+			5425	ATYILEAGK	9	77	483.2686429788199	964.5227330244398	2	483.2685852050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATYILEAGK_	ENSG00000148444|ENST00000376836|COMMD3;ENST00000463409.6_1_10:22605382-22615407:+|nuORF;ENST00000470045.1_1_10:22605346-22607030:+|nuORF;ENST00000472673.5_1_10:22606461-22607284:+|nuORF;ENST00000479958.6_1_10:22605346-22607121:+|nuORF;ENST00000483684.1_1_10:22606823-22607748:+|nuORF;ENST00000496071.5_1_10:22605382-22607284:+|nuORF;ENST00000602574.5_1_10:22605346-22607236:+|nuORF	122.93914200107957	0.019420478173996256	2				NaN	NaN	0	NaN	7516	3565	11081
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11084	30.674	NaN	11568	30	0	1480.3	0.106				-1	CSTLTLNTAQ	10	82	554.7674779060682	1107.5204028789362	2	554.767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_C(Carbamidomethyl (C))STLTLNTAQ_	ENSG00000102755|ENST00000282397|FLT1;FLT1|p.L977Efs*2|1|0.31|ENSG00000102755|chr13:28322817-28322818|TT/-|frameshift_variant;FLT1|p.N273Ifs*6|1|0.17|ENSG00000102755|chr13:28431306-28431306|T/-|frameshift_variant;nc|ENSG00000102755|P17948-2|FLT1;nc|ENSG00000102755|P17948-3|FLT1;nc|ENSG00000102755|P17948-4|FLT1	53.08895987439943	0.42869529153390606	2				NaN	NaN	0	NaN	7517	3565	11081
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11085	30.676	NaN	16575	30	0	9565.7	0.106	+			12848	GEPEKLGQAL	10	72	521.2825645744093	1040.5505762156185	2	521.2821044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEPEKLGQAL_	ENSG00000115677|ENST00000310931|HDLBP;ENST00000470710.1_1_2:242194755-242195742:-|nuORF;HDLBP|p.S551Kfs*2|1|0.11|ENSG00000115677|chr2:241248082-241248083|-/T|frameshift_variant	58.2462437865262	0.38179041844353556	2				NaN	NaN	0	NaN	7518	3565	11081
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11086	30.678	NaN	6219.4	30	0	1316.8	0.106	+			23220	KYGNANVW	8	70	476.23787349168134	950.4611940501627	2	476.237548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KYGNANVW_	ENSG00000104695|ENST00000221138|PPP2CB;ENSG00000113575|ENST00000481195|PPP2CA;nc|ENSG00000113575|P67775-2|PPP2CA	71.37791200682192	0.3954169775488141	2				NaN	NaN	0	NaN	7519	3565	11081
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11087	30.679	NaN	6145.9	30	0	809.28	0.036	+			1036	AEKLPINRL	9	68	351.885097066692	1052.633461800276	3	351.88519287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEKLPINRL_	ENSG00000072310|ENST00000261646|SREBF1;ENST00000470247.1_1_17:17721556-17722545:-|nuORF;nc|ENSG00000072310|P36956-2|SREBF1;nc|ENSG00000072310|P36956-3|SREBF1;nc|ENSG00000072310|P36956-4|SREBF1;nc|ENSG00000072310|P36956-5|SREBF1;nc|ENSG00000072310|P36956-6|SREBF1	56.43379154798735	0.2433427591689151	2				NaN	NaN	0	NaN	7520	3565	11081
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11088	30.68	NaN	12979	30	0	1875.2	0.141	+			50817	YERVDGSVR	9	67	540.7755507104131	NaN	0	540.775390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YERVDGSVR_	ENSG00000131778|ENST00000369258|CHD1L;nc|ENSG00000131778|Q86WJ1-3|CHD1L;nc|ENSG00000131778|Q86WJ1-4|CHD1L;nc|ENSG00000131778|Q86WJ1-5|CHD1L	107.00750918261382	0.012399597248013027	2				NaN	NaN	0	NaN	7521	3565	11081
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11100	30.708	NaN	11896	30	0	911.9	0.213	+			12480	GEDSKQALQQL	11	86	608.81264757181	1215.6107422104199	2	608.8120727539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEDSKQALQQL_	ENSG00000143375|ENST00000271636|CGN	117.7056744995986	0.02459125945945966	2				NaN	NaN	0	NaN	7530	3568	11099
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11101	30.711	NaN	12059	30	0	2442.4	0.106	+			18929	IVNDFAYMK	9	84	558.7733462937525	1115.532139654305	2	558.7735595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_IVNDFAYM(Oxidation (M))K_	ENSG00000170348|ENST00000303575|TMED10;ENST00000534816.1_1_8:146220430-146220868:+|nuORF;ENST00000555036.1_1_14:75602424-75614456:-|nuORF;ENST00000555873.1_1_14:75601590-75605782:-|nuORF;ENST00000556969.5_1_14:75601590-75614465:-|nuORF	112.10723106719422	0.02684780151337622	2				NaN	NaN	0	NaN	7531	3568	11099
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11102	30.713	NaN	15301	30	0	2257.4	0.106	+			4177	ATFLDPRYK	9	79	555.8008481686625	1109.5871434041248	2	555.8013916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATFLDPRYK_	ENSG00000214717|ENST00000652001|ZBED1	93.1432384553994	0.056003526918089595	2				NaN	NaN	0	NaN	7532	3568	11099
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11103	30.715	NaN	8084.5	30	0	794.95	0.106	+			34045	RSLVFPEAE	9	72	524.2773337838256	1046.5401146344511	2	524.2774047851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RSLVFPEAE_	ENSG00000036473|ENST00000039007|OTC	72.87924865735499	0.12833875048249987	2				NaN	NaN	0	NaN	7533	3568	11099
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11104	30.717	NaN	9416.2	30	0	569.13	0.106	+			18325	IPTRVVTNY	9	78	531.8012185498229	1061.5878841664457	2	531.801025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IPTRVVTNY_	ENSG00000198959|ENST00000361475|TGM2;ENST00000468262.5_1_20:36766485-36793648:-|nuORF;nc|ENSG00000198959|P21980-2|TGM2	65.46538089061403	0.16805504838372562	2				NaN	NaN	0	NaN	7534	3568	11099
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11105	30.719	NaN	7878.9	30	0	895.88	0.106			+	41507	SVPLWPDAPA	10	71	526.7760723431155	1051.537591753031	2	526.7755737304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVPLWPDAPA_	REV__ENST00000290730.11_1_22:24179058-24180975:-|nuORF;REV__ENST00000404056.1_1_22:24179058-24179352:-|nuORF;REV__ENST00000464110.1_1_22:24179058-24180982:-|nuORF;REV__ENST00000476077.1_1_22:24179058-24181169:-|nuORF;REV__nc|ENSG00000099958|Q96Q80-4|DERL3	51.33545320467046	0.4446945571623749	2				NaN	NaN	0	NaN	7535	3568	11099
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11106	30.721	NaN	6548.2	30	0	555.75	0.034			+	26140	LSPVRAPTT	9	72	471.2743947672074	940.5342366012148	2	472.27642822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSPVRAPTT_	REV__ENST00000375114.7_1_20:32581481-32619357:+|nuORF	51.33545320467046	0.2872990594074956	2				NaN	NaN	0	NaN	7536	3568	11099
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11119	30.748	NaN	25922	30	0	3330.3	0.214	+			10097	ESLKCERLK	9	91	553.3044892315876	1104.594425529975	2	553.3041381835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ESLKCERLK_	ENSG00000157445|ENST00000474759|CACNA2D3;ENST00000478261.5_1_3:55107739-55108230:+|nuORF;nc|ENSG00000157445|Q8IZS8-2|CACNA2D3	49.44154591367651	0.3095138337212152	2				NaN	NaN	0	NaN	7546	3571	11118
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11120	30.751	NaN	19662	30	0	6049.2	0.106	+			36	AAALFTIHK	9	87	324.5271463882052	970.5596097648156	3	324.5272521972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAALFTIHK_	ENSG00000061676|ENST00000361354|NCKAP1;nc|ENSG00000061676|Q9Y2A7-2|NCKAP1	63.30626980617807	0.18605348971131092	2				NaN	NaN	0	NaN	7547	3571	11118
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11121	30.753	NaN	12403	30	0	1284.3	0.106	+			37	AAALFTIHK	9	75	486.2869992541759	970.5594455751518	2	486.28692626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AAALFTIHK_	ENSG00000061676|ENST00000361354|NCKAP1;nc|ENSG00000061676|Q9Y2A7-2|NCKAP1	138.8255168832474	0.011031062795199845	2				NaN	NaN	0	NaN	7548	3571	11118
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11122	30.755	NaN	14073	30	0	1144.8	0.106	+			50770	YEKQDTLL	8	79	505.2635377076974	1008.5125224821949	2	505.26361083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YEKQDTLL_	ENSG00000134910|ENST00000392708|STT3A;ENST00000534472.5_1_11:125465789-125479519:+|nuORF;STT3A|p.F106Sfs*45|2|0.41|ENSG00000134910|chr11:125602843-125602843|T/-|frameshift_variant	93.1432384553994	0.2679547234115296	2				NaN	NaN	0	NaN	7549	3571	11118
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11123	30.757	NaN	9642	30	0	1170.9	0.106	+			20565	KFSPNTSQF	9	75	528.2617441417517	1054.5089353503033	2	528.2617797851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KFSPNTSQF_	BUB3|p.I231Gfs*30|1|0.05|ENSG00000154473|chr10:123162349-123162350|-/GGTAA|frameshift_variant;ENSG00000154473|ENST00000368865|BUB3;nc|ENSG00000154473|O43684-2|BUB3	104.01359247289065	0.03510646158778409	2				NaN	NaN	0	NaN	7550	3571	11118
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11124	30.759	NaN	18504	30	0	4008.5	0.106	+			50533	YAPVHADDL	9	80	500.7402947770117	999.4660366208234	2	500.7403259277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YAPVHADDL_	ENSG00000064651|ENST00000262461|SLC12A2;ENST00000504416.5_1_5:127493760-127503560:+|nuORF;ENST00000509616.1_1_5:127493760-127507455:+|nuORF;nc|ENSG00000064651|P55011-3|SLC12A2;SLC12A2|p.E1119Rfs*7|1|0.47|ENSG00000064651|chr5:128184417-128184418|-/A|frameshift_variant;SLC12A2|p.P1171Sfs*18|1|0.38|ENSG00000064651|chr5:128186498-128186499|-/TC|frameshift_variant	85.35947970620816	0.07794846947388434	2				NaN	NaN	0	NaN	7551	3571	11118
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11125	30.761	NaN	9271.7	30	0	867.04	0.035	+			5557	AVANIVNSVK	10	77	507.80063569445764	1013.5867184557153	2	507.80072021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AVANIVNSVK_	ENSG00000042286|ENST00000307864|AIFM2;nc|ENSG00000042286|Q9BRQ8-2|AIFM2	106.88024417677582	0.05726438866303799	2				NaN	NaN	0	NaN	7552	3571	11118
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11143	30.798	NaN	18993	30	0	3429.1	0.215			+	24116	LEKQLTAI	8	82	458.27921773088406	914.5438825285681	2	458.2789001464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LEKQLTAI_	REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-10|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-13|TTN;REV__nc|ENSG00000155657|Q8WZ42-2|TTN;REV__nc|ENSG00000155657|Q8WZ42-3|TTN;REV__nc|ENSG00000155657|Q8WZ42-4|TTN;REV__nc|ENSG00000155657|Q8WZ42-5|TTN;REV__nc|ENSG00000155657|Q8WZ42-6|TTN;REV__nc|ENSG00000155657|Q8WZ42-7|TTN;REV__nc|ENSG00000155657|Q8WZ42-8|TTN;REV__nc|ENSG00000155657|Q8WZ42-9|TTN;REV__nc|ENSG00000155657|Q8WZ42|TTN;REV__TTN|p.A12650Gfs*4|1|0.4|ENSG00000155657|chr2:178633489-178633490|-/T|frameshift_variant;REV__TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;REV__TTN|p.A7105Cfs*8|1|0.32|ENSG00000155657|chr2:178722523-178722524|-/A|frameshift_variant;REV__TTN|p.D20259Rfs*40|1|0.44|ENSG00000155657|chr2:178583105-178583106|-/T|frameshift_variant;REV__TTN|p.D21555Ifs*6|1|0.33|ENSG00000155657|chr2:178576659-178576659|G/-|frameshift_variant;REV__TTN|p.D2189Tfs*17|1|0.23|ENSG00000155657|chr2:178775147-178775147|T/-|frameshift_variant;REV__TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;REV__TTN|p.D9026Afs*9|1|0.26|ENSG00000155657|chr2:178711205-178711208|CTGT/-|frameshift_variant;REV__TTN|p.E15132Sfs*22|1|0.27|ENSG00000155657|chr2:178612094-178612094|C/-|frameshift_variant;REV__TTN|p.E20392Dfs*6|1|0.04|ENSG00000155657|chr2:178582357-178582358|-/TTTAAAATTA|frameshift_variant;REV__TTN|p.E20392Kfs*4|1|0.02|ENSG00000155657|chr2:178582359-178582360|-/TTTT|frameshift_variant;REV__TTN|p.E9224Gfs*8|1|0.04|ENSG00000155657|chr2:178709697-178709698|-/TCTTATGATATCTTGAC|frameshift_variant;REV__TTN|p.F18705Lfs*8|1|0.37|ENSG00000155657|chr2:178590687-178590687|A/-|frameshift_variant;REV__TTN|p.G12742Vfs*2|1|0.05|ENSG00000155657|chr2:178632983-178632983|C/-|frameshift_variant;REV__TTN|p.G14712Dfs*11|1|0.37|ENSG00000155657|chr2:178614341-178614341|G/-|frameshift_variant;REV__TTN|p.G19920Afs*12|1|0.42|ENSG00000155657|chr2:178584961-178584961|G/-|frameshift_variant;REV__TTN|p.G22029Efs*22|2|0.13|ENSG00000155657|chr2:178575125-178575125|T/-|frameshift_variant;REV__TTN|p.I10495Nfs*4|1|0.37|ENSG00000155657|chr2:178685288-178685289|-/T|frameshift_variant;REV__TTN|p.I24998Nfs*2|1|0.35|ENSG00000155657|chr2:178566216-178566217|-/T|frameshift_variant;REV__TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;REV__TTN|p.I3592Lfs*36|1|0.25|ENSG00000155657|chr2:178741508-178741508|T/-|frameshift_variant;REV__TTN|p.I9225Cfs*34|1|0.06|ENSG00000155657|chr2:178709695-178709696|-/ATATCCATGAGCA|frameshift_variant;REV__TTN|p.K10923Rfs*104|2|0.23|ENSG00000155657|chr2:178679362-178679362|T/-|frameshift_variant;REV__TTN|p.K11381Nfs*25|1|0.07|ENSG00000155657|chr2:178671133-178671133|T/-|frameshift_variant;REV__TTN|p.K11556Sfs*15|1|0.39|ENSG00000155657|chr2:178652287-178652287|T/-|frameshift_variant;REV__TTN|p.K14271Qfs*5|1|0.02|ENSG00000155657|chr2:178617351-178617352|-/G|frameshift_variant;REV__TTN|p.K26626Nfs*34|1|0.34|ENSG00000155657|chr2:178561331-178561331|T/-|frameshift_variant;REV__TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;REV__TTN|p.K4988Ifs*4|1|0.06|ENSG00000155657|chr2:178733381-178733382|-/GAAAATGATG|frameshift_variant;REV__TTN|p.L1709Tfs*7|2|0.3|ENSG00000155657|chr2:178776739-178776740|-/T|frameshift_variant;REV__TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;REV__TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant;REV__TTN|p.L7142*|1|0.06|ENSG00000155657|chr2:178722407-178722411|TCTTA/-|frameshift_variant;REV__TTN|p.M4154Nfs*4|1|0.21|ENSG00000155657|chr2:178739821-178739822|-/T|frameshift_variant;REV__TTN|p.N13487Tfs*49|1|0.34|ENSG00000155657|chr2:178621335-178621335|T/-|frameshift_variant;REV__TTN|p.N15496Ifs*16|1|0.09|ENSG00000155657|chr2:178610116-178610116|T/-|frameshift_variant;REV__TTN|p.N2114Mfs*25|1|0.05|ENSG00000155657|chr2:178775523-178775523|T/-|frameshift_variant;REV__TTN|p.N6458Mfs*74|1|0.44|ENSG00000155657|chr2:178725998-178725998|T/-|frameshift_variant;REV__TTN|p.N7648Tfs*27|1|0.32|ENSG00000155657|chr2:178719598-178719598|T/-|frameshift_variant;REV__TTN|p.N8964Tfs*27|1|0.11|ENSG00000155657|chr2:178711988-178711988|T/-|frameshift_variant;REV__TTN|p.P1407Lfs*5|1|0.18|ENSG00000155657|chr2:178777964-178777965|-/GA|frameshift_variant;REV__TTN|p.P16126Rfs*3|1|0.25|ENSG00000155657|chr2:178607301-178607302|TG/-|frameshift_variant;REV__TTN|p.P22810Hfs*10|1|0.03|ENSG00000155657|chr2:178572780-178572781|-/AAAT|frameshift_variant;REV__TTN|p.P4036Qfs*14|1|0.19|ENSG00000155657|chr2:178740175-178740175|G/-|frameshift_variant;REV__TTN|p.S2859Qfs*30|1|0.21|ENSG00000155657|chr2:178770127-178770127|G/-|frameshift_variant;REV__TTN|p.S5235Hfs*25|1|0.06|ENSG00000155657|chr2:178732315-178732316|-/ATATATG|frameshift_variant;REV__TTN|p.T4116Sfs*25|1|0.04|ENSG00000155657|chr2:178739937-178739938|-/CTATTATATATGAGGAA|frameshift_variant;REV__TTN|p.V10632Yfs*16|1|0.16|ENSG00000155657|chr2:178683254-178683254|T/-|frameshift_variant;REV__TTN|p.V11008Sfs*13|1|0.33|ENSG00000155657|chr2:178678146-178678147|-/T|frameshift_variant;REV__TTN|p.V11345Ffs*4|1|0.4|ENSG00000155657|chr2:178672044-178672044|T/-|frameshift_variant;REV__TTN|p.V13823*|1|0.28|ENSG00000155657|chr2:178620027-178620027|C/-|frameshift_variant;REV__TTN|p.V1964Wfs*14|1|0.32|ENSG00000155657|chr2:178775975-178775975|T/-|frameshift_variant;REV__TTN|p.V22573Cfs*4|2|0.31|ENSG00000155657|chr2:178573492-178573492|C/-|frameshift_variant;REV__TTN|p.V27442Cfs*4|1|0.05|ENSG00000155657|chr2:178558107-178558108|-/A|frameshift_variant;REV__TTN|p.W5728Mfs*3|1|0.07|ENSG00000155657|chr2:178730267-178730268|-/T|frameshift_variant	93.1432384553994	0.2679547234115296	2				NaN	NaN	0	NaN	7567	3574	11142
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11144	30.802	NaN	7520	30	0	2398.4	0.106			+	18295	IPNSIELR	8	65	471.2743947672074	940.5342366012148	2	471.274169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IPNSIELR_	REV__ENSG00000196535|ENST00000527372|MYO18A;REV__MYO18A|p.T58M|1|0.35|ENSG00000196535|chr17:29166768-29166768|G/A|missense_variant;REV__nc|ENSG00000196535|Q92614-3|MYO18A;REV__nc|ENSG00000196535|Q92614-4|MYO18A	38.80614096846853	0.6637206697844082	2				NaN	NaN	0	NaN	7568	3574	11142
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11145	30.804	NaN	9289.7	30	0	1095.6	0.106	+			32932	REAGAGGLSI	10	75	465.75392193585947	929.493290938519	2	465.75347900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_REAGAGGLSI_	ENSG00000128591|ENST00000325888|FLNC;ENSG00000136068|ENST00000295956|FLNB;ENST00000481470.5_1_3:58118395-58154450:+|nuORF;FLNC|p.H2471Tfs*58|1|0.18|ENSG00000128591|chr7:128856767-128856767|C/-|frameshift_variant;nc|ENSG00000128591|Q14315-2|FLNC;nc|ENSG00000136068|O75369-2|FLNB;nc|ENSG00000136068|O75369-3|FLNB;nc|ENSG00000136068|O75369-6|FLNB;nc|ENSG00000136068|O75369-7|FLNB;nc|ENSG00000136068|O75369-8|FLNB;nc|ENSG00000136068|O75369-9|FLNB	51.52775601994872	0.4429225830406686	2				NaN	NaN	0	NaN	7569	3574	11142
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11146	30.806	NaN	8483.1	30	0	1391.4	0.106				-1	 	0	79	336.53411418053076	1006.5805131417924	3	336.53424072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7570	3574	11142
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11147	30.807	NaN	13829	30	0	3827.4	0.106				-1	 	0	66	377.74601869336556	753.4774844535311	2	377.74591064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7571	3574	11142
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11148	30.809	NaN	6591.8	30	0	811.04	0.035	+			51333	YSMPSTHAM	9	66	512.7147629764816	1023.4149730197631	2	512.7151489257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YSMPSTHAM_	ENSG00000126821|ENST00000247225|SGPP1;SGPP1|p.I357Lfs*3|2|0.18|ENSG00000126821|chr14:63686363-63686363|G/-|frameshift_variant	53.351449002276354	0.2690372970092375	2				NaN	NaN	0	NaN	7572	3574	11142
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11149	30.81	NaN	8629.7	30	0	1037.9	0.139	+			34607	RVPKLLAVS	9	73	491.8241522157246	981.6337514982492	2	491.8238220214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RVPKLLAVS_	ENST00000576980.1_1_17:7255325-7255865:+|nuORF	37.15910966729921	0.4535818937225704	2				NaN	NaN	0	NaN	7573	3574	11142
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11163	30.841	NaN	13387	30	0	1228.5	0.214	+			19153	IYQKAFEHL	9	76	574.8088889137464	1147.6032248942927	2	574.8087158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IYQKAFEHL_	BBS4|p.E506Vfs*5|1|0.05|ENSG00000140463|chr15:72737544-72737545|AA/-|frameshift_variant;ENSG00000140463|ENST00000268057|BBS4;nc|ENSG00000140463|Q96RK4-2|BBS4;nc|ENSG00000140463|Q96RK4-3|BBS4	114.8945686534367	0.024290463251177924	2				NaN	NaN	0	NaN	7584	3577	11162
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11164	30.845	NaN	14024	30	0	1922.5	0.106			+	5598	AVAYHGLAL	9	74	457.7561960008982	NaN	0	457.75592041015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVAYHGLAL_	REV__ENSG00000185758|ENST00000541814|CLDN24	49.21078951299608	0.21213183292994464	2				NaN	NaN	0	NaN	7585	3577	11162
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11165	30.847	NaN	19586	30	0	5475.2	0.106	+			1340	AETRAGLTL	9	81	466.2641729207905	930.513792908381	2	466.26336669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AETRAGLTL_	ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;nc|ENSG00000185164|Q5JPE7-3|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2;NOMO1|p.P1102Hfs*42|1|0.36|ENSG00000103512|chr16:14886838-14886838|C/-|frameshift_variant	80.45461616416974	0.09558281504443908	2				NaN	NaN	0	NaN	7586	3577	11162
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11166	30.849	NaN	10610	30	0	2149.8	0.106	+			39915	STMAIIVNK	9	81	488.77813487227274	975.5417168113455	2	488.778076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STMAIIVNK_	ENSG00000082898|ENST00000401558|XPO1;ENST00000428210.5_1_2:61705957-61719950:-|nuORF;ENST00000461407.5_1_2:61712881-61715780:-|nuORF;ENST00000492182.5_1_2:61710065-61713073:-|nuORF	136.26810882979174	0.012230845423532208	2				NaN	NaN	0	NaN	7587	3577	11162
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11167	30.85	NaN	8991.8	30	0	872.98	0.106	+			48892	VVDIPFRSK	9	86	530.8115728142462	1059.6085926952924	2	530.811279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVDIPFRSK_	ENSG00000081177|ENST00000685843|EXD2;nc|ENSG00000081177|Q9NVH0-2|EXD2	68.84614121027924	0.14577793175421136	2				NaN	NaN	0	NaN	7588	3577	11162
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11168	30.852	NaN	7154.1	30	0	575.72	0.036	+			20518	KFIDTTSKF	9	76	543.794929758487	1085.575306583774	2	543.7947998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KFIDTTSKF_	ENSG00000100316|ENST00000216146|RPL3;ENSG00000140986|ENST00000268661|RPL3L;ENST00000417615.1_1_14:99439218-99439536:-|nuORF;ENST00000473638.5_1_22:39708982-39709710:-|nuORF	120.8684288430529	0.02067403653475984	2				NaN	NaN	0	NaN	7589	3577	11162
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11169	30.853	NaN	4879.5	30	0	1177.8	0.139			+	47076	VLIERPIS	8	61	463.78668682874303	925.5588207242861	2	463.786865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VLIERPIS_	REV__ENSG00000100104|ENST00000215917|SRRD	30.503639358989545	0.7238069182250283	2				NaN	NaN	0	NaN	7590	3577	11162
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11182	30.882	NaN	28954	30	0	9061	0.214	+			19163	IYQVQNQGLS	10	79	575.2986405873362	1148.5827282414723	2	575.2988891601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IYQVQNQGLS_	ENST00000528986.1_1_11:121971359-121971719:-|nuORF	51.19269402634007	0.44601001148513897	2				NaN	NaN	0	NaN	7600	3580	11181
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11183	30.886	NaN	13964	30	0	1051.5	0.106	+			49529	VYANGIRNI	9	79	510.2850210886626	1018.5554892441252	2	510.28558349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYANGIRNI_	ENSG00000145495|ENST00000274140|MARCHF6;nc|ENSG00000145495|O60337-5|MARCHF6;nc|ENSG00000145495|O60337-6|MARCHF6	95.81516180277367	0.04847050768394289	2				NaN	NaN	0	NaN	7601	3580	11181
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11184	30.888	NaN	7499.7	30	0	567.26	0.106			+	18892	IVKTTTEFK	9	76	533.8120339147824	1065.6095148963648	2	533.8125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IVKTTTEFK_	REV__ENSG00000112339|ENST00000367837|HBS1L;REV__nc|ENSG00000112339|Q9Y450-4|HBS1L	52.936696900407355	0.27249468807391813	2				NaN	NaN	0	NaN	7602	3580	11181
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11185	30.89	NaN	7334	30	0	512.25	0.106	+			10963	FEAPDQKTL	9	70	524.7702258788331	1047.5258988244661	2	524.769775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FEAPDQKTL_	ENSG00000117523|ENST00000647382|PRRC2C;nc|ENSG00000117523|Q9Y520-2|PRRC2C;nc|ENSG00000117523|Q9Y520-3|PRRC2C;nc|ENSG00000117523|Q9Y520-4|PRRC2C;nc|ENSG00000117523|Q9Y520-5|PRRC2C;nc|ENSG00000117523|Q9Y520-6|PRRC2C;nc|ENSG00000117523|Q9Y520|PRRC2C;PRRC2C|p.K1018Nfs*7|1|0.21|ENSG00000117523|chr1:171540521-171540521|A/-|frameshift_variant;PRRC2C|p.P2791Lfs*5|1|0.1|ENSG00000117523|chr1:171591761-171591761|C/-|frameshift_variant	106.88024417677582	0.032181361622142884	2				NaN	NaN	0	NaN	7603	3580	11181
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11186	30.892	NaN	6714.2	30	0	637.66	0.106	+			20455	KEVEQFTQV	9	76	554.2862635579843	1106.5579741827685	2	554.287841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEVEQFTQV_	ENSG00000140990|ENST00000268668|NDUFB10;ENST00000565031.1_1_16:2011477-2011732:+|nuORF;nc|ENSG00000140990|O96000-2|NDUFB10	77.53327743719008	0.1082147015697554	2				NaN	NaN	0	NaN	7604	3580	11181
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11187	30.893	NaN	6072	30	0	716.14	0.106	+			13966	GSAQGMDSMLK	11	80	562.7572718854449	1123.4999908376897	2	562.7578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GSAQGMDSMLK_	ENSG00000153046|ENST00000397588|CDYL;ENST00000472453.5_1_6:4776866-4954287:+|nuORF;nc|ENSG00000153046|Q9Y232-3|CDYL;nc|ENSG00000153046|Q9Y232-4|CDYL;nc|ENSG00000153046|Q9Y232|CDYL	57.148748479083515	0.34890646465650643	2				NaN	NaN	0	NaN	7605	3580	11181
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11188	30.895	NaN	6790	30	0	613.23	0.037			+	18473	ISFIYYPWP	9	87	593.3037924759161	1184.5930320186321	2	593.304443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ISFIYYPWP_	REV__tr|U7SU34|U7SU34_FUSNUTIGR02206familymembraneproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01004PE=4SV=1	40.5726180659479	0.4135428067754104	2				NaN	NaN	0	NaN	7606	3580	11181
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11201	30.921	NaN	13194	30	0	4568	0.214			+	8819	EELIDQKL	8	80	494.2720049579388	986.5294569826776	2	494.2716369628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EELIDQKL_	REV__ENSG00000104356|ENST00000401707|POP1;REV__POP1|p.I399Lfs*23|2|0.09|ENSG00000104356|chr8:98136659-98136659|A/-|frameshift_variant;REV__POP1|p.T752Lfs*12|3|0.32|ENSG00000104356|chr8:98156240-98156240|A/-|frameshift_variant	53.351449002276354	0.5676011784961348	2				NaN	NaN	0	NaN	7616	3583	11200
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11202	30.925	NaN	9674.8	30	0	488.66	0.106			+	8702	EEAWFRVVCAR	11	86	711.8511930591218	1421.6878331850435	2	711.84912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_EEAWFRVVC(Carbamidomethyl (C))AR_	REV__ENSG00000168159|ENST00000305943|RNF187	52.936696900407355	0.3865048210802777	2				NaN	NaN	0	NaN	7617	3583	11200
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11203	30.927	NaN	10830	30	0	3968.7	0.106	+			41197	SVLDLSVHK	9	71	333.1936855583805	996.5592272753415	3	333.1940002441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVLDLSVHK_	ENSG00000116731|ENST00000311066|PRDM2;nc|ENSG00000116731|Q13029-2|PRDM2;nc|ENSG00000116731|Q13029-3|PRDM2;nc|ENSG00000116731|Q13029-5|PRDM2;PRDM2|p.G1390Efs*14|1|0.21|ENSG00000116731|chr1:13781963-13781964|GG/-|frameshift_variant;PRDM2|p.N1426Ifs*3|1|0.17|ENSG00000116731|chr1:13782065-13782065|A/-|frameshift_variant;PRDM2|p.P1648Qfs*14|1|0.24|ENSG00000116731|chr1:13782731-13782731|G/-|frameshift_variant	49.536043120802724	0.308405419312776	2				NaN	NaN	0	NaN	7618	3583	11200
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11204	30.929	NaN	5548.5	30	0	978.47	0.106	+			45367	TVTCFMTI	8	67	466.21731398251853	930.4200750318371	2	466.2170715332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_TVTCFM(Oxidation (M))TI_	ENST00000519493.1_1_8:19690706-19694700:+|nuORF	62.97842346883844	0.4722955155785405	2				NaN	NaN	0	NaN	7619	3583	11200
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11205	30.931	NaN	4867.5	30	0	389.4	0.106	+			47040	VLEQQRIGL	9	69	528.3141411758031	1054.6137294184061	2	528.314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VLEQQRIGL_	ENSG00000162825|ENST00000698833|NBPF20;ENSG00000263956|ENST00000682118|NBPF11;nc|ENSG00000162825|P0DPF2|NBPF20	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	7620	3583	11200
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11206	30.932	NaN	3546.9	30	0	417.57	0.106	+			31647	QMSPIIQSG	9	64	480.7436091052948	959.4726652773896	2	480.7431945800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QMSPIIQSG_	nc|ENSG00000144283|Q99569-2|PKP4	44.116797842482775	0.37197099687881774	2				NaN	NaN	0	NaN	7621	3583	11200
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11207	30.934	NaN	7938.9	30	0	601.65	0.035	+			448	AAVGYIMEK	9	76	491.2552621119085	980.495971290617	2	491.7536315917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AAVGYIMEK_	ENSG00000111361|ENST00000424014|EIF2B1	42.86426827375447	0.38666266728046506	2				NaN	NaN	0	NaN	7622	3583	11200
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11219	30.959	NaN	59171	30	0	16029	0.214			+	26946	LYGKVQEL	8	81	475.27130258651795	948.5280522398359	2	475.27105712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LYGKVQEL_	REV__ENSG00000163817|ENST00000358525|SLC6A20;REV__nc|ENSG00000163817|Q9NP91-2|SLC6A20	134.81075121484326	0.23895231276701365	2				NaN	NaN	0	NaN	7631	3586	11218
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11220	30.963	NaN	27521	30	0	6288.2	0.106	+			2681	AQNPSLFVK	9	93	502.28215531696327	1002.5497577007266	2	502.28204345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AQNPSLFVK_	ENSG00000117410|ENST00000472174|ATP6V0B;nc|ENSG00000117410|Q99437-2|ATP6V0B	90.60085204095205	0.06317133949006545	2				NaN	NaN	0	NaN	7632	3586	11218
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11221	30.965	NaN	68929	30	0	9602.1	0.106	+			36828	SIFDGRVVAK	10	98	546.313646647527	1090.6127403618539	2	546.314208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SIFDGRVVAK_	ENSG00000143183|ENST00000367881|TMCO1;nc|ENSG00000143183|Q9UM00-2|TMCO1;nc|ENSG00000143183|Q9UM00|TMCO1	101.45984612302182	0.07336148045341315	2				NaN	NaN	0	NaN	7633	3586	11218
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11222	30.967	NaN	27575	30	0	3941.5	0.106	+			15192	GTSQLYVYR	9	89	543.7830072979118	1085.5514616626235	2	543.7828979492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTSQLYVYR_	CPSF1|p.A1319Pfs*42|2|0.23|ENSG00000071894|chr8:144393943-144393943|C/-|frameshift_variant;CPSF1|p.P950Lfs*6|1|0.13|ENSG00000071894|chr8:144396478-144396478|G/-|frameshift_variant;CPSF1|p.V640Wfs*20|1|0.36|ENSG00000071894|chr8:144398110-144398110|G/-|frameshift_variant;ENSG00000071894|ENST00000616140|CPSF1	114.8945686534367	0.024290463251177924	2				NaN	NaN	0	NaN	7634	3586	11218
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11223	30.969	NaN	13821	30	0	2162.8	0.106	+			449	AAVGYIMEK	9	80	491.2552621119085	980.495971290617	2	491.2571105957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AAVGYIMEK_	ENSG00000111361|ENST00000424014|EIF2B1	104.0567914643314	0.03506238181059741	2				NaN	NaN	0	NaN	7635	3586	11218
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11224	30.97	NaN	11924	30	0	1696	0.106	+			33009	REGEGGLSL	9	70	459.2380871051665	916.4616212771331	2	459.2378234863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_REGEGGLSL_	ENSG00000155363|ENST00000369645|MOV10;ENST00000468624.5_1_1:113242781-113243126:+|nuORF	93.1432384553994	0.056003526918089595	2				NaN	NaN	0	NaN	7636	3586	11218
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11225	30.972	NaN	13395	30	0	2370.5	0.035	+			28246	NDHQDLVSV	9	73	513.7474610076805	NaN	0	513.7461547851562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NDHQDLVSV_	ENSG00000137857|ENST00000389037|DUOX1;ENSG00000140279|ENST00000389039|DUOX2;ENST00000561220.6_1_15:45434150-45457096:+|nuORF;nc|ENSG00000137857|Q9NRD9-2|DUOX1;nc|ENSG00000140279|Q9NRD8|DUOX2	58.22992032128504	0.15686832049467786	2				NaN	NaN	0	NaN	7637	3586	11218
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11244	31.01	NaN	5974.5	30	0	734.32	0.214	+			38524	SSCPQQWIK	9	76	567.274304952513	1132.534056971826	2	567.2744750976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SSC(Carbamidomethyl (C))PQQWIK_	ENSG00000168275|ENST00000366615|COA6;nc|ENSG00000168275|Q5JTJ3-3|COA6;nc|ENSG00000168275|Q5JTJ3|COA6	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	7653	3589	11243
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11245	31.014	NaN	8193.2	30	0	2209.5	0.106				-1	WVIYTTLMYII	11	77	716.3844621744864	1430.7543714157728	2	716.3822631835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_WVIYTTLM(Oxidation (M))YII_	ADAMTS20|p.E786Kfs*86|1|0.33|ENSG00000173157|chr12:43440005-43440005|T/-|frameshift_variant	21.9598887501803	0.7594498734240387	2				NaN	NaN	0	NaN	7654	3589	11243
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11246	31.016	NaN	18791	30	0	6954	0.106				-1	APLSADPVMAK	11	79	558.2929040740308	1114.5712552148616	2	558.292724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_APLSADPVM(Oxidation (M))AK_	ENST00000441188.2_1_X:92477682-92478501:-|nuORF	51.19269402634007	0.4047928213175833	2				NaN	NaN	0	NaN	7655	3589	11243
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11247	31.017	NaN	5781.9	30	0	900.1	0.106			+	24941	LKVYKVKAE	9	67	539.3368711368605	1076.659189340521	2	539.7987060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LKVYKVKAE_	REV__ENSG00000171914|ENST00000636159|TLN2	36.446750945000026	0.4619375763483977	2				NaN	NaN	0	NaN	7656	3589	11243
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11248	31.019	NaN	10089	30	0	1185.4	0.106			+	27917	MTYAGNGFMVV	11	74	595.2747942447252	1188.5350355562503	2	595.2745971679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MTYAGNGFMVV_	REV__ENSG00000170881|ENST00000303545|RNF139;REV__RNF139|p.R559Lfs*60|1|0.18|ENSG00000170881|chr8:124487325-124487325|G/-|frameshift_variant	35.15202426646627	0.6210751305041943	2				NaN	NaN	0	NaN	7657	3589	11243
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11249	31.021	NaN	7949.7	30	0	2881.6	0.038			+	-1	KGECNCRTFV	10	75	607.2778313246129	1212.5411097160256	2	607.827880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_KGECNC(Carbamidomethyl (C))RTFV_	REV__ENSG00000116690|ENST00000445192|PRG4;REV__nc|ENSG00000116690|Q92954-2|PRG4;REV__nc|ENSG00000116690|Q92954-3|PRG4;REV__nc|ENSG00000116690|Q92954-4|PRG4;REV__nc|ENSG00000116690|Q92954-5|PRG4;REV__nc|ENSG00000116690|Q92954-6|PRG4	27.047317107675042	0.6589519614906109	2				NaN	NaN	0	NaN	7658	3589	11243
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11250	31.022	NaN	2696.2	30	0	723.3	0.139			+	13326	GKLVKAGS	8	54	380.2398986816406	NaN	0	380.2398986816406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GKLVKAGS_	REV__tr|U7T1R9|U7T1R9_FUSNUFlavodoxin-likedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00550PE=4SV=1	24.20275056022122	1.7418937515398478	2				NaN	NaN	0	NaN	7659	3589	11243
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11261	31.047	NaN	66336	30	0	12476	0.203	+			10792	FAHTNVESL	9	90	509.25353473797213	1016.4925165427443	2	509.25341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FAHTNVESL_	ENSG00000167004|ENST00000300289|PDIA3;ENST00000434494.5_1_15:44038867-44063413:+|nuORF;ENST00000471856.1_1_1:146649692-146651075:+|nuORF	104.0567914643314	0.03506238181059741	2				NaN	NaN	0	NaN	7667	3592	11260
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11262	31.05	NaN	14046	30	0	1725	0.106	+			40855	SVFDSSSDMEK	11	81	616.2614502007307	1230.5083474682613	2	616.26123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVFDSSSDMEK_	ENSG00000112297|ENST00000633556|CRYBG1;nc|ENSG00000112297|Q9Y4K1-1|CRYBG1	72.09557110113691	0.21826960075221502	2				NaN	NaN	0	NaN	7668	3592	11260
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11263	31.052	NaN	10891	30	0	5811.6	0.106	+			12849	GEPEKLGQAL	10	69	521.2825645744093	1040.5505762156185	2	521.282470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEPEKLGQAL_	ENSG00000115677|ENST00000310931|HDLBP;ENST00000470710.1_1_2:242194755-242195742:-|nuORF;HDLBP|p.S551Kfs*2|1|0.11|ENSG00000115677|chr2:241248082-241248083|-/T|frameshift_variant	66.96192283764107	0.30252237217063654	2				NaN	NaN	0	NaN	7669	3592	11260
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11264	31.054	NaN	12896	30	0	3436	0.106	+			49705	VYLNKLKTV	9	68	359.8934208777299	1076.6584332333898	3	359.8937072753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VYLNKLKTV_	ENSG00000127603|ENST00000564288|MACF1;ENST00000476350.1_1_1:39768622-39838291:+|nuORF;MACF1|p.A5223Lfs*8|1|0.21|ENSG00000127603|chr1:39388486-39388486|G/-|frameshift_variant;MACF1|p.N4824Kfs*19|1|0.33|ENSG00000127603|chr1:39387292-39387293|-/A|frameshift_variant;MACF1|p.S2157Ffs*3|1|0.37|ENSG00000127603|chr1:39333036-39333037|-/T|frameshift_variant;MACF1|p.T4896Lfs*29|1|0.27|ENSG00000127603|chr1:39387507-39387507|A/-|frameshift_variant;nc|ENSG00000127603|Q9UPN3-2|MACF1;nc|ENSG00000127603|Q9UPN3-3|MACF1;nc|ENSG00000127603|Q9UPN3-4|MACF1;nc|ENSG00000127603|Q9UPN3|MACF1	35.15202426646627	0.4747332964206883	2				NaN	NaN	0	NaN	7670	3592	11260
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11265	31.056	NaN	5788.1	30	0	988.41	0.106			+	45455	TWTCAPMWTT	10	58	599.2568952663812	1196.4992375995623	2	599.2571411132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TWTCAPMWTT_	REV__ENST00000490869.1_1_X:47062096-47065733:+|nuORF	20.94693142431847	0.7087701759873708	2				NaN	NaN	0	NaN	7671	3592	11260
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11266	31.058	NaN	5349.7	30	0	1028.4	0.106	+			14834	GTLLGVATAT	10	62	452.26091827763355	902.5072836220671	2	452.26025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTLLGVATAT_	LACC1|p.M313T|1|0.1|ENSG00000179630|chr13:43888787-43888787|T/C|missense_variant	47.657333605630114	0.47858658696240314	2				NaN	NaN	0	NaN	7672	3592	11260
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11267	31.06	NaN	6728.8	30	0	1016.8	0.037	+			21348	KLYMYTYY	8	74	572.7714115594	NaN	0	572.7722778320312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KLYMYTYY_	ENST00000394205.7_2_4:141303286-141303394:+|nuORF	40.5726180659479	1.7418937515398478	2				NaN	NaN	0	NaN	7673	3592	11260
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11280	31.086	NaN	24924	30	0	2313.4	0.214	+			50429	YACEVTHQGL	10	93	560.7584407121968	1119.5023284911936	2	560.758544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YACEVTHQGL_	nc|ENSG00000211592|P01834|IGKC	159.27591364854348	0.006848530601684873	2				NaN	NaN	0	NaN	7683	3595	11279
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11281	31.089	NaN	11293	30	0	1266.3	0.106	+			8861	EEREPTPVL	9	75	535.2803876830035	1068.5462224328069	2	535.2801513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EEREPTPVL_	ENSG00000120802|ENST00000556029|TMPO;nc|ENSG00000120802|P42166|TMPO;nc|ENSG00000120802|P42167-2|TMPO;nc|ENSG00000120802|P42167-3|TMPO;TMPO|p.L427Cfs*13|1|0.4|ENSG00000120802|chr12:98547767-98547767|T/-|frameshift_variant;TMPO|p.L427Ffs*18|1|0.28|ENSG00000120802|chr12:98547766-98547767|-/T|frameshift_variant;TMPO|p.R409Tfs*36|1|0.06|ENSG00000120802|chr12:98547707-98547708|-/A|frameshift_variant;TMPO|p.T99Lfs*12|2|0.34|ENSG00000120802|chr12:98527894-98527894|A/-|frameshift_variant	84.9155231211612	0.07920012719736333	2				NaN	NaN	0	NaN	7684	3595	11279
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11282	31.092	NaN	5592.5	30	0	596.37	0.106			+	-1	NCMILVLY	8	63	492.7487930383144	983.4830331434288	2	492.7487487792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_NCM(Oxidation (M))ILVLY_	REV__ENSG00000124089|ENST00000243911|MC3R;REV__ENST00000330374.6_1_X:150574361-150574568:+|nuORF	60.403631409065575	0.49778558673058804	2				NaN	NaN	0	NaN	7685	3595	11279
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11283	31.093	NaN	7165.2	30	0	856.43	0.106	+			45795	VAGVVRVWL	9	83	333.54286706579336	997.6067717975801	3	333.54296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VAGVVRVWL_	ENST00000487805.6_1_3:49742606-49743280:+|nuORF	26.69291269510374	0.5537881896960711	2				NaN	NaN	0	NaN	7686	3595	11279
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11284	31.095	NaN	7022.1	30	0	679.49	0.106	+			8971	EFLHGTKR	8	82	494.2720049579388	986.5294569826776	2	494.77410888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EFLHGTKR_	ENSG00000138688|ENST00000679879|BLTP1;KIAA1109-FSIP2|1|fusion;nc|ENSG00000138688|Q2LD37-2|BLTP1;nc|ENSG00000138688|Q2LD37-4|BLTP1;nc|ENSG00000138688|Q2LD37-6|BLTP1;nc|ENSG00000138688|Q2LD37-7|BLTP1;nc|ENSG00000138688|Q2LD37|BLTP1	35.61828744233558	0.6843154725607303	2				NaN	NaN	0	NaN	7687	3595	11279
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11285	31.097	NaN	6048.5	30	0	2095.7	0.106	+			688	AEALARARVI	10	70	357.2220946635506	NaN	0	357.2220458984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEALARARVI_	ENST00000505031.6_1_12:133313703-133313853:-|nuORF	29.170058357718403	0.40439580130713204	2				NaN	NaN	0	NaN	7688	3595	11279
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11286	31.099	NaN	6399.7	30	0	576.26	0.036	+			49568	VYDTNPAKF	9	71	527.7638926629758	1053.5132323927514	2	527.7645263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VYDTNPAKF_	ENSG00000139433|ENST00000318348|GLTP	101.25262130126117	0.03792372629710479	2				NaN	NaN	0	NaN	7689	3595	11279
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11303	31.133	NaN	90040	30	0	12281	0.214	+			14544	GTEFGGSIYQK	11	92	593.7904942039178	1185.5664354746355	2	593.7909545898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTEFGGSIYQK_	ENSG00000078668|ENST00000022615|VDAC3;ENSG00000165637|ENST00000332211|VDAC2;ENSG00000213585|ENST00000265333|VDAC1;ENST00000489906.5_1_5:133308464-133311792:-|nuORF;nc|ENSG00000078668|Q9Y277-2|VDAC3;nc|ENSG00000165637|P45880-1|VDAC2;nc|ENSG00000165637|P45880-2|VDAC2	178.54760496737404	9.14451565508135E-06	2				NaN	NaN	0	NaN	7703	3598	11302
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11304	31.137	NaN	10029	30	0	1266.9	0.106	+			36080	SEKDSVVSL	9	79	482.2531242217411	962.4916955102822	2	482.25311279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEKDSVVSL_	ENSG00000151304|ENST00000339397|SRFBP1;SRFBP1|p.N236Kfs*5|4|0.26|ENSG00000151304|chr5:122020434-122020435|-/A|frameshift_variant;SRFBP1|p.P207H|1|0.31|ENSG00000151304|chr5:122020355-122020355|C/A|missense_variant;SRFBP1|p.Y270Lfs*8|1|0.12|ENSG00000151304|chr5:122020539-122020540|-/T|frameshift_variant	117.81106730687013	0.02252488733980868	2				NaN	NaN	0	NaN	7704	3598	11302
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11305	31.139	NaN	8370.5	30	0	1486.7	0.106	+			5719	AVFLGLARK	9	71	487.8110733393146	973.6075937454292	2	487.8108215332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVFLGLARK_	ENSG00000160752|ENST00000368356|FDPS;ENST00000489324.1_1_1:155289446-155290397:+|nuORF;nc|ENSG00000160752|P14324-2|FDPS	76.84663266511073	0.11118375776443899	2				NaN	NaN	0	NaN	7705	3598	11302
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11306	31.141	NaN	4822.7	30	0	810.41	0.106	+			16936	HPNGLQVMY	9	72	537.7563032362821	1073.498053539364	2	537.7557373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_HPNGLQVM(Oxidation (M))Y_	ENSG00000135775|ENST00000366669|COG2;ENST00000494371.5_1_1:230807261-230814859:+|nuORF;nc|ENSG00000135775|Q14746-2|COG2	65.80317337860623	0.1652391959156183	2				NaN	NaN	0	NaN	7706	3598	11302
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11307	31.142	NaN	5624.1	30	0	655.98	0.106	+			50992	YIQEARNCL	9	70	555.2733635351192	1108.5321741370383	2	555.2742919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YIQEARNCL_	ENSG00000143367|ENST00000368849|TUFT1;ENST00000461859.1_1_1:151535003-151537177:+|nuORF;nc|ENSG00000143367|Q9NNX1-2|TUFT1;nc|ENSG00000143367|Q9NNX1-3|TUFT1;TUFT1|p.V176Cfs*59|1|0.36|ENSG00000143367|chr1:151569698-151569707|GACGGTGCAG/-|frameshift_variant	90.60085204095205	0.06317133949006545	2				NaN	NaN	0	NaN	7707	3598	11302
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11308	31.144	NaN	9436.4	30	0	1321.8	0.037			+	-1	FLTLLWMSL	9	82	570.3119171127721	1138.6092812923441	2	570.3116455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_FLTLLWM(Oxidation (M))SL_	REV__ENST00000493032.5_1_1:46714192-46726402:+|nuORF	79.45101966838831	0.09992237243120712	2				NaN	NaN	0	NaN	7708	3598	11302
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11309	31.145	NaN	7966.6	30	0	2072.2	0.145				-1	AYVHMVTHF	9	60	374.1794807547078	1119.5166128643234	3	374.1795654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_AYVHM(Oxidation (M))VTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	27.882242232435846	0.5426732730940306	2				NaN	NaN	0	NaN	7709	3598	11302
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11322	31.174	NaN	24379	30	0	5307.8	0.214	+			33557	RLFVGSIPK	9	78	508.8161520909271	1015.6177512486543	2	508.81622314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RLFVGSIPK_	ENSG00000125944|ENST00000302271|HNRNPR;ENSG00000135316|ENST00000369622|SYNCRIP;HNRNPR|p.L367Qfs*19|1|0.05|ENSG00000125944|chr1:23313620-23313621|-/TTTAATCTCT|frameshift_variant;HNRNPR|p.W594Gfs*15|1|0.23|ENSG00000125944|chr1:23310575-23310576|CA/-|frameshift_variant;nc|ENSG00000125944|O43390-2|HNRNPR;nc|ENSG00000125944|O43390-3|HNRNPR;nc|ENSG00000125944|O43390-4|HNRNPR;nc|ENSG00000271793|O60506-2|SYNCRIP;nc|ENSG00000271793|O60506-3|SYNCRIP;nc|ENSG00000271793|O60506-4|SYNCRIP;nc|ENSG00000271793|O60506-5|SYNCRIP	78.26377905018397	0.10505600812668463	2				NaN	NaN	0	NaN	7719	3601	11321
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11323	31.178	NaN	9728.8	30	0	1199.4	0.106			+	17329	IAHISTIIK	9	78	498.3160954820482	994.6176380308964	2	498.3159484863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IAHISTIIK_	REV__OR7A5|p.S223T|1|0.42|ENSG00000188269|chr19:14827575-14827575|A/T|missense_variant	47.657333605630114	0.33044192980041115	2				NaN	NaN	0	NaN	7720	3601	11321
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11324	31.18	NaN	8929.3	30	0	1690	0.106				-1	 	0	76	336.53411418053076	1006.5805131417924	3	336.53424072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7721	3601	11321
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11325	31.182	NaN	7546.8	30	0	527.69	0.106	+			16350	HELQEKLSPL	10	75	597.3300104851464	1192.6454680370928	2	597.3300170898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HELQEKLSPL_	ENSG00000118137|ENST00000236850|APOA1	159.27591364854348	0.006848530601684873	2				NaN	NaN	0	NaN	7722	3601	11321
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11326	31.184	NaN	8583.7	30	0	1182.7	0.106	+			26794	LVSESSDVLPK	11	78	587.3216827558764	1172.6288125785527	2	587.3216552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LVSESSDVLPK_	CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000425226.1_1_2:203705056-203705395:-|nuORF;ENST00000489121.1_1_3:137820322-137820643:-|nuORF;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	128.60217544463768	0.003645184319602832	2				NaN	NaN	0	NaN	7723	3601	11321
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11327	31.185	NaN	4456.3	30	0	548.21	0.106	+			3176	ASISGMEITK	10	74	518.7714326636611	1035.5283123941222	2	518.7706298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASISGMEITK_	ENST00000547564.1_1_12:44196258-44199673:-|nuORF	65.15724298150197	0.31893571707528906	2				NaN	NaN	0	NaN	7724	3601	11321
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11328	31.187	NaN	18139	30	0	4750.9	0.036	+			10603	EYLTKVDKL	9	85	554.8160500362267	1107.6175471392532	2	554.8154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EYLTKVDKL_	ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000141367|Q00610-2|CLTC	129.42129120953632	0.01549634589885217	2				NaN	NaN	0	NaN	7725	3601	11321
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11343	31.219	NaN	47232	30	0	10658	0.214	+			18827	ITYLKDKDI	9	75	370.2129018611615	1107.6168761836846	3	370.21307373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ITYLKDKDI_	tr|U7SQI7|U7SQI7_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01652PE=4SV=1	31.529811441608018	0.5085848003137583	2				NaN	NaN	0	NaN	7737	3604	11342
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11344	31.222	NaN	5909.8	30	0	507.62	0.106			+	8900	EEVAGFIKL	9	73	503.2824687629774	1004.5503845927548	2	503.78204345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EEVAGFIKL_	REV__ENSG00000110619|ENST00000380525|CARS1;REV__ENST00000526890.5_1_11:3022346-3038536:-|nuORF;REV__ENST00000531387.5_1_11:3022346-3069017:-|nuORF;REV__nc|ENSG00000110619|P49589-2|CARS1;REV__nc|ENSG00000110619|P49589|CARS1	47.657333605630114	0.33044192980041115	2				NaN	NaN	0	NaN	7738	3604	11342
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11345	31.224	NaN	7277.3	30	0	695.1	0.106			+	18967	IVRGQRHR	8	78	511.3102345659175	1020.605916198635	2	511.3101806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IVRGQRHR_	REV__ENSG00000205269|ENST00000379426|TMEM170B	26.79610172149135	0.7524337208463756	2				NaN	NaN	0	NaN	7739	3604	11342
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11346	31.226	NaN	7645.5	30	0	1815.1	0.106			+	8354	EALHNSLQAEP	11	71	604.7990042613217	1207.5834555894432	2	604.7990112304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EALHNSLQAEP_	REV__CLIC6|p.N583Tfs*15|1|0.16|ENSG00000159212|chr21:34708778-34708778|A/-|frameshift_variant;REV__ENSG00000159212|ENST00000349499|CLIC6;REV__nc|ENSG00000159212|Q96NY7|CLIC6	36.31764250033197	0.6083289427130232	2				NaN	NaN	0	NaN	7740	3604	11342
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11347	31.228	NaN	6365.9	30	0	1693.3	0.106				-1	MVLVCYVYVPL	11	83	686.3547954520503	1370.6950379709006	2	686.3538208007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))VLVC(Carbamidomethyl (C))YVYVPL_	ENST00000609063.5_2_13:33851800-33855228:+|nuORF	31.954861631926434	0.6546107591430316	2				NaN	NaN	0	NaN	7741	3604	11342
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11348	31.23	NaN	4618.6	30	0	631.44	0.038			+	-1	LICIRPYKM	9	57	398.5556635262836	1192.6451611790508	3	398.5555114746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_LIC(Carbamidomethyl (C))IRPYKM_	REV__ENSG00000145348|ENST00000394708|TBCK;REV__ENST00000510927.5_1_4:106967729-107168455:-|nuORF;REV__nc|ENSG00000145348|Q8TEA7-2|TBCK;REV__nc|ENSG00000145348|Q8TEA7-3|TBCK	20.94693142431847	0.6074874384046576	2				NaN	NaN	0	NaN	7742	3604	11342
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11349	31.23	NaN	4220.7	30	0	313.24	0.14	+			28011	MWKGLQPC	8	71	481.7325524833183	961.4505520334366	2	481.7323913574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MWKGLQPC_	ENST00000467807.5_1_19:56888677-56888731:+|nuORF	35.200714571348534	0.6875396545722289	2				NaN	NaN	0	NaN	7743	3604	11342
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11360	31.257	NaN	42228	30	0	12801	0.214	+			742	AEDDFKKVL	9	95	355.5253968784226	1063.554361235468	3	355.525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEDDFKKVL_	ENSG00000102580|ENST00000602402|DNAJC3	45.9519527083369	0.35044536499095585	2				NaN	NaN	0	NaN	7751	3607	11359
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11361	31.261	NaN	21396	30	0	2928	0.106			+	8456	EARYDGGLL	9	79	497.25474255809576	992.4949321829915	2	497.2548522949219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EARYDGGLL_	REV__AMOT|p.L850Cfs*59|1|0.13|ENSG00000126016|chrX:112779606-112779606|G/-|frameshift_variant;REV__ENSG00000126016|ENST00000371959|AMOT;REV__nc|ENSG00000126016|Q4VCS5-2|AMOT	93.19546047674547	0.05585629608842056	2				NaN	NaN	0	NaN	7752	3607	11359
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11362	31.263	NaN	7486.4	30	0	1628	0.106			+	24978	LLDFGLGTAAL	11	65	364.20932481658895	1089.606145049967	3	364.20941162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LLDFGLGTAAL_	REV__ENSG00000006432|ENST00000554752|MAP3K9;REV__MAP3K9|p.P970Qfs*74|1|0.11|ENSG00000006432|chr14:70730786-70730786|G/-|frameshift_variant;REV__MAP3K9|p.S907Rfs*21|1|0.24|ENSG00000006432|chr14:70732651-70732651|G/-|frameshift_variant;REV__nc|ENSG00000006432|P80192-4|MAP3K9	30.568863376406313	0.6691487505135859	2				NaN	NaN	0	NaN	7753	3607	11359
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11363	31.265	NaN	9800.9	30	0	1260.4	0.106	+			29399	PARSALPEPE	10	76	533.7801179445729	1065.5456829559457	2	534.2813720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PARSALPEPE_	ENST00000369808.7_2_X:153633410-153636936:-|nuORF	37.81151784470057	0.569310847604193	2				NaN	NaN	0	NaN	7754	3607	11359
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11364	31.266	NaN	9974	30	0	809.2	0.106	+			25935	LSHEESVSF	9	76	517.7430243580052	1033.4714957828103	2	517.7427978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSHEESVSF_	ENSG00000105856|ENST00000222574|HBP1;nc|ENSG00000105856|O60381-2|HBP1;nc|ENSG00000105856|O60381-3|HBP1	79.45101966838831	0.09992237243120712	2				NaN	NaN	0	NaN	7755	3607	11359
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11365	31.268	NaN	7512.3	30	0	875.54	0.106	+			44151	TQLLCEAPNL	10	89	367.85722572313176	NaN	0	367.8570861816406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TQLLCEAPNL_	ENSG00000114554|ENST00000393409|PLXNA1	43.41853373365257	0.34721146686759025	2				NaN	NaN	0	NaN	7756	3607	11359
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11366	31.27	NaN	6601.6	30	0	802.75	0.036				-1	RKCFSNPF	8	76	528.2565460233474	NaN	0	528.2559204101562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_RKC(Carbamidomethyl (C))FSNPF_	ENSG00000197275|ENST00000336148|RAD54B;ENST00000463267.5_1_8:95411790-95423517:-|nuORF;RAD54B|p.F714Lfs*5|1|0.29|ENSG00000197275|chr8:94380250-94380250|A/-|frameshift_variant	31.954861631926434	1.7418937515398478	2				NaN	NaN	0	NaN	7757	3607	11359
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11378	31.296	NaN	7221	30	0	1105.1	0.214			+	46735	VGPYTGLSKN	10	69	518.277153401059	1034.5397538689178	2	518.27734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VGPYTGLSKN_	REV__ENST00000530018.5_1_11:77888841-77889027:-|nuORF	35.61828744233558	0.588957954432594	2				NaN	NaN	0	NaN	7766	3610	11377
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11379	31.3	NaN	4921.3	30	0	1296.3	0.106	+			1637	AGNKPANAVL	10	61	477.7722213494341	953.5298897656683	2	477.77191162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AGNKPANAVL_	CHD5|p.P1887Rfs*14|1|0.5|ENSG00000116254|chr1:6106698-6106698|G/-|frameshift_variant;ENSG00000111642|ENST00000544040|CHD4;ENSG00000116254|ENST00000262450|CHD5;ENSG00000170004|ENST00000330494|CHD3;ENST00000470531.5_3_17:7807732-7814900:+|nuORF;nc|ENSG00000111642|Q14839-2|CHD4;nc|ENSG00000170004|Q12873-2|CHD3;nc|ENSG00000170004|Q12873-3|CHD3	34.172542307311794	0.6007644933930345	2				NaN	NaN	0	NaN	7767	3610	11377
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11380	31.302	NaN	5690.2	30	0	557.02	0.106				-1	LCMLMRKA	8	68	491.2552621119085	980.495971290617	2	491.75384521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_LCMLM(Oxidation (M))RKA_	ENST00000254508.6_1_3:13372048-13372099:-|nuORF	37.028477286268924	0.6747514403204248	2				NaN	NaN	0	NaN	7768	3610	11377
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11381	31.303	NaN	7784.2	30	0	816.11	0.106	+			51551	YYEEQHPEL	9	78	604.2673254946828	1206.5200980561656	2	604.2672119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YYEEQHPEL_	ENSG00000008517|ENST00000525643|IL32;nc|ENSG00000008517|P24001-3|IL32;nc|ENSG00000008517|P24001-4|IL32;nc|ENSG00000008517|P24001-5|IL32;nc|ENSG00000008517|P24001-6|IL32;nc|ENSG00000008517|P24001|IL32	136.26810882979174	0.012230845423532208	2				NaN	NaN	0	NaN	7769	3610	11377
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11382	31.305	NaN	5127.1	30	0	554.76	0.106			+	13942	GRVSFGLR	8	64	446.2608123598538	890.5070717865076	2	446.2609558105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GRVSFGLR_	REV__ENSG00000186862|ENST00000619208|PDZD7;REV__nc|ENSG00000186862|Q9H5P4-1|PDZD7;REV__nc|ENSG00000186862|Q9H5P4-2|PDZD7	51.33545320467046	0.5859736979383976	2				NaN	NaN	0	NaN	7770	3610	11377
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11383	31.307	NaN	3796.1	30	0	607.83	0.106	+			17569	IEAKDRIP	8	64	471.27440037588224	940.5342478185645	2	471.27398681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IEAKDRIP_	ENSG00000197912|ENST00000645818|SPG7;ENST00000564047.1_1_16:89590622-89596095:+|nuORF;nc|ENSG00000197912|Q9UQ90-2|SPG7	32.81241826257853	0.7059802730411993	2				NaN	NaN	0	NaN	7771	3610	11377
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11384	31.309	NaN	4619.3	30	0	416.66	0.035	+			51271	YRNPFAIY	8	70	522.267580435359	NaN	0	522.2677612304688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YRNPFAIY_	ENSG00000184350|ENST00000389832|MRGPRE;MRGPRE|p.Q208Sfs*103|1|0.15|ENSG00000184350|chr11:3228178-3228178|G/-|frameshift_variant	47.91560031466742	1.7418937515398478	2				NaN	NaN	0	NaN	7772	3610	11377
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11397	31.336	NaN	22219	30	0	2307.3	0.214	+			28306	NEFEATQKL	9	89	540.2717748795556	1078.528996825911	2	540.2724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NEFEATQKL_	ENSG00000165030|ENST00000297689|NFIL3	142.36107225718385	0.009372392051035914	2				NaN	NaN	0	NaN	7782	3613	11396
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11398	31.34	NaN	18257	30	0	1755.4	0.106	+			36829	SIFDGRVVAK	10	84	546.313646647527	1090.6127403618539	2	546.3142700195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SIFDGRVVAK_	ENSG00000143183|ENST00000367881|TMCO1;nc|ENSG00000143183|Q9UM00-2|TMCO1;nc|ENSG00000143183|Q9UM00|TMCO1	75.65223720490533	0.23114180991572172	2				NaN	NaN	0	NaN	7783	3613	11396
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11399	31.342	NaN	21676	30	0	2308.2	0.106	+			9544	ELEEATKNLQK	11	89	651.8485712236453	1301.6825895140905	2	651.8486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ELEEATKNLQK_	ENSG00000169641|ENST00000302291|LUZP1;LUZP1|p.F744Lfs*22|1|0.36|ENSG00000169641|chr1:23092030-23092030|A/-|frameshift_variant;LUZP1|p.P479Rfs*22|2|0.4|ENSG00000169641|chr1:23092826-23092826|G/-|frameshift_variant;LUZP1|p.T938Nfs*5|1|0.29|ENSG00000169641|chr1:23091451-23091452|-/G|frameshift_variant;LUZP1|p.V674Gfs*16|1|0.33|ENSG00000169641|chr1:23092241-23092242|-/C|frameshift_variant;nc|ENSG00000169641|Q86V48-2|LUZP1;nc|ENSG00000169641|Q86V48-3|LUZP1	85.16082228582465	0.11858485847190207	2				NaN	NaN	0	NaN	7784	3613	11396
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11400	31.344	NaN	13365	30	0	2225.9	0.106	+			26984	LYMKNGQGF	9	79	529.2602830353129	1056.5060131374257	2	529.260009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LYMKNGQGF_	ENSG00000116473|ENST00000369709|RAP1A;ENSG00000127314|ENST00000250559|RAP1B;ENST00000494982.1_1_1:112233982-112249293:+|nuORF;nc|ENSG00000127314|P61224-3|RAP1B;nc|ENSG00000127314|P61224-4|RAP1B;nc|ENSG00000254893|A6NIZ1|RAP1BL	94.00642277110589	0.05356993013874309	2				NaN	NaN	0	NaN	7785	3613	11396
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11401	31.346	NaN	8680.2	30	0	2472.6	0.106	+			36413	SETPTFAKV	9	72	490.2584848709101	978.5024168086202	2	490.25823974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SETPTFAKV_	CDT1|p.Q285Sfs*33|1|0.46|ENSG00000167513|chr16:88806036-88806036|C/-|frameshift_variant;ENSG00000167513|ENST00000301019|CDT1	67.49366992349736	0.1516260258713357	2				NaN	NaN	0	NaN	7786	3613	11396
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11402	31.347	NaN	8041.5	30	0	3611.3	0.106	+			24507	LGKAKPLA	8	55	399.26592036777316	796.5172878023463	2	399.265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LGKAKPLA_	ENST00000432223.2_1_11:73141522-73179519:-|nuORF	28.2542754592877	0.7411748056684583	2				NaN	NaN	0	NaN	7787	3613	11396
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11403	31.349	NaN	6326.5	30	0	900.41	0.037	+			45565	TYMGHTGAVW	10	74	569.7529747095327	1137.4913964858654	2	569.753173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_TYM(Oxidation (M))GHTGAVW_	ENSG00000084623|ENST00000677711|EIF3I;ENST00000474371.1_1_1:32688150-32694122:+|nuORF;ENST00000489353.5_1_1:32688042-32691823:+|nuORF	74.25504064058377	0.24255678544297835	2				NaN	NaN	0	NaN	7788	3613	11396
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11417	31.379	NaN	44146	30	0	8711.7	0.214	+			49629	VYIDRVRSL	9	111	560.8273964019168	1119.6402398706334	2	560.8278198242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYIDRVRSL_	ENSG00000160789|ENST00000368300|LMNA;nc|ENSG00000160789|P02545-2|LMNA;nc|ENSG00000160789|P02545-3|LMNA;nc|ENSG00000160789|P02545-6|LMNA	60.11826168202944	0.21262886028301267	2				NaN	NaN	0	NaN	7799	3616	11416
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11418	31.382	NaN	9555.3	30	0	1440	0.106	+			13772	GQGTFTKIFK	10	73	563.8165126035128	1125.6184722738255	2	563.81689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GQGTFTKIFK_	ENSG00000096968|ENST00000381652|JAK2	102.95473732560676	0.06892206462712186	2				NaN	NaN	0	NaN	7800	3616	11416
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11419	31.384	NaN	5394.8	30	0	508.63	0.106			+	7789	DPGPQFQSL	9	72	494.74162472019043	987.4686965071809	2	494.7418212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DPGPQFQSL_	REV__ENST00000429053.1_1_6:53659035-53659071:-|nuORF	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	7801	3616	11416
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11420	31.386	NaN	10012	30	0	1708.3	0.106	+			40289	STSSHCLLY	9	76	534.2450870625197	1066.4756211918393	2	534.2453002929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_STSSHC(Carbamidomethyl (C))LLY_	ENSG00000236287|ENST00000413761|ZBED5;ZBED5|p.N390Mfs*3|1|0.09|ENSG00000236287|chr11:10853777-10853777|T/-|frameshift_variant	40.5726180659479	0.4135428067754104	2				NaN	NaN	0	NaN	7802	3616	11416
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11421	31.388	NaN	5829.2	30	0	639.66	0.106			+	29811	PKGTVQCQLE	10	70	551.7801804358531	1101.5458079385062	2	551.7807006835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PKGTVQCQLE_	REV__ENSG00000139915|ENST00000399232|MDGA2;REV__ENST00000557238.5_1_14:47341050-47530490:-|nuORF;REV__MDGA2|p.I945Lfs*8|1|0.13|ENSG00000139915|chr14:46841973-46841973|A/-|frameshift_variant;REV__nc|ENSG00000139915|Q7Z553-2|MDGA2;REV__nc|ENSG00000139915|Q7Z553|MDGA2	60.11826168202944	0.36476464221954025	2				NaN	NaN	0	NaN	7803	3616	11416
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11422	31.39	NaN	6758.2	30	0	493.51	0.106			+	-1	NISTPLMTI	9	75	503.26579863497153	1004.5170443367431	2	503.2675476074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_NISTPLM(Oxidation (M))TI_	REV__ENSG00000106049|ENST00000265395|HIBADH;REV__ENST00000428288.2_1_7:27565835-27702463:-|nuORF	74.25504064058377	0.12238981753128622	2				NaN	NaN	0	NaN	7804	3616	11416
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11423	31.391	NaN	7902.2	30	0	2505.2	0.037	+			16790	HPDAPMSQVY	10	69	572.7586388520053	1143.5027247708106	2	572.7587280273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HPDAPMSQVY_	ENSG00000123562|ENST00000441076|MORF4L2;ENSG00000185787|ENST00000426013|MORF4L1;ENST00000560710.1_1_15:79184565-79186592:+|nuORF;nc|ENSG00000185787|Q9UBU8-3|MORF4L1;nc|ENSG00000185787|Q9UBU8|MORF4L1	38.753607047826485	0.5606299674732264	2				NaN	NaN	0	NaN	7805	3616	11416
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11435	31.418	NaN	19663	30	0	3855.7	0.214	+			23517	LAHLGSTL	8	78	406.2374081827447	810.4602634322894	2	406.2370910644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LAHLGSTL_	ENSG00000167595|ENST00000646935|PROSER3	124.32384870173489	0.22837359796540624	2				NaN	NaN	0	NaN	7814	3619	11434
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11436	31.421	NaN	36308	30	0	6787.7	0.106	+			28358	NEKQISQVL	9	90	529.795943643803	1057.5773343544058	2	529.7960205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NEKQISQVL_	ARHGAP35|p.F938Lfs*10|1|0.18|ENSG00000160007|chr19:46921484-46921484|T/-|frameshift_variant;ARHGAP35|p.K945Rfs*3|1|0.4|ENSG00000160007|chr19:46921503-46921503|A/-|frameshift_variant;ARHGAP35|p.Y859Ifs*28|1|0.09|ENSG00000160007|chr19:46921245-46921245|T/-|frameshift_variant;ENSG00000160007|ENST00000672722|ARHGAP35	86.88156770896713	0.07365720931774442	2				NaN	NaN	0	NaN	7815	3619	11434
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11437	31.423	NaN	25397	30	0	5395.4	0.106	+			11001	FEHCNFNDVT	10	81	641.7610021434201	1281.5074513536401	2	641.7615356445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_FEHC(Carbamidomethyl (C))NFNDVT_	ENSG00000085063|ENST00000642928|CD59;nc|ENSG00000284969|P13987-2|CD59	81.52500206392136	0.18316182710238588	2				NaN	NaN	0	NaN	7816	3619	11434
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11438	31.425	NaN	16519	30	0	1678.7	0.106	+			12786	GELTGEVRM	9	79	496.2474259128632	990.4802988925264	2	496.2471008300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GELTGEVRM_	ENSG00000128591|ENST00000325888|FLNC;FLNC|p.H2471Tfs*58|1|0.18|ENSG00000128591|chr7:128856767-128856767|C/-|frameshift_variant;FLNC|p.V1896Wfs*57|1|0.04|ENSG00000128591|chr7:128851472-128851472|G/-|frameshift_variant;nc|ENSG00000128591|Q14315-2|FLNC	90.60085204095205	0.06317133949006545	2				NaN	NaN	0	NaN	7817	3619	11434
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11439	31.427	NaN	23147	30	0	10615	0.106	+			18401	IRRESYTK	8	84	526.79673242053	1051.57891190786	2	526.7969360351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IRRESYTK_	ENST00000409170.3_3_X:100650353-100667050:+|nuORF	71.29570347882199	0.39610197767395533	2				NaN	NaN	0	NaN	7818	3619	11434
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11440	31.429	NaN	22175	30	0	2101.2	0.106	+			50398	YAAGVHSVL	9	93	458.7480250863264	915.4814972394528	2	458.74755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YAAGVHSVL_	AP5Z1|p.Q696Rfs*6|3|0.43|ENSG00000242802|chr7:4790814-4790814|C/-|frameshift_variant;ENSG00000242802|ENST00000649063|AP5Z1;ENST00000490487.1_1_7:4829477-4830874:+|nuORF	76.84663266511073	0.11118375776443899	2				NaN	NaN	0	NaN	7819	3619	11434
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11441	31.431	NaN	7710.3	30	0	645.61	0.035	+			36004	SEIDQINKV	9	70	523.2796791875594	1044.5448054419187	2	523.2800903320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SEIDQINKV_	ENSG00000008128|ENST00000404249|CDK11A;ENSG00000248333|ENST00000341832|CDK11B;ENST00000356937.7_1_1:1634348-1635645:-|nuORF;ENST00000463652.5_1_1:1635130-1635691:-|nuORF;nc|ENSG00000008128|Q9UQ88-10|CDK11A;nc|ENSG00000008128|Q9UQ88-3|CDK11A;nc|ENSG00000008128|Q9UQ88-4|CDK11A;nc|ENSG00000008128|Q9UQ88-5|CDK11A;nc|ENSG00000008128|Q9UQ88|CDK11A;nc|ENSG00000248333|P21127-10|CDK11B;nc|ENSG00000248333|P21127-12|CDK11B;nc|ENSG00000248333|P21127-3|CDK11B;nc|ENSG00000248333|P21127-4|CDK11B;nc|ENSG00000248333|P21127-5|CDK11B;nc|ENSG00000248333|P21127-6|CDK11B;nc|ENSG00000248333|P21127-8|CDK11B;nc|ENSG00000248333|P21127-9|CDK11B;nc|ENSG00000248333|P21127|CDK11B	90.60085204095205	0.06317133949006545	2				NaN	NaN	0	NaN	7820	3619	11434
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11453	31.457	NaN	34974	30	0	3425.6	0.214	+			19431	KAPVTVTSL	9	89	458.27918632241875	914.5438197116375	2	458.2788391113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAPVTVTSL_	ENSG00000172534|ENST00000310441|HCFC1;HCFC1|p.L913Wfs*11|1|0.39|ENSG00000172534|chrX:153956309-153956309|A/-|frameshift_variant;HCFC1|p.P1894Lfs*22|1|0.06|ENSG00000172534|chrX:153950835-153950835|G/-|frameshift_variant;nc|ENSG00000172534|P51610-2|HCFC1;nc|ENSG00000172534|P51610-4|HCFC1	118.74307786436346	0.02196067127630568	2				NaN	NaN	0	NaN	7829	3622	11452
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11454	31.46	NaN	14896	30	0	3965.9	0.106	+			23274	KYLEETNSL	9	73	548.779735697477	1095.544918461754	2	548.7799682617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KYLEETNSL_	ENSG00000198945|ENST00000361794|L3MBTL3;L3MBTL3|p.M479*|1|0.26|ENSG00000198945|chr6:130086161-130086161|A/-|frameshift_variant;nc|ENSG00000198945|Q96JM7-2|L3MBTL3	140.11223852658463	0.010427410095706195	2				NaN	NaN	0	NaN	7830	3622	11452
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11455	31.462	NaN	12723	30	0	1760	0.106	+			4458	ATINNPNLLTK	11	76	599.8434377596063	1197.6723225860126	2	599.8433227539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATINNPNLLTK_	DDX60L|p.A1208Vfs*33|1|0.16|ENSG00000181381|chr4:168395993-168395994|-/CTTTGACA|frameshift_variant;DDX60L|p.F1291Lfs*11|1|0.38|ENSG00000181381|chr4:168391582-168391582|A/-|frameshift_variant;DDX60L|p.N1040Kfs*4|1|0.03|ENSG00000181381|chr4:168406043-168406044|-/AT|frameshift_variant;DDX60L|p.N1168Tfs*25|2|0.3|ENSG00000181381|chr4:168396113-168396113|T/-|frameshift_variant;DDX60L|p.N1642Mfs*9|1|0.2|ENSG00000181381|chr4:168371615-168371615|T/-|frameshift_variant;DDX60L|p.R1122Efs*29|1|0.05|ENSG00000181381|chr4:168400953-168400953|T/-|frameshift_variant;ENSG00000181381|ENST00000682922|DDX60L;nc|ENSG00000181381|Q5H9U9-2|DDX60L	107.45493779368988	0.045275086874925735	2				NaN	NaN	0	NaN	7831	3622	11452
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11456	31.464	NaN	3998.9	30	0	347.28	0.106	+			12747	GELANEVKV	9	63	479.7641609668342	957.5137690004684	2	479.763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GELANEVKV_	ENSG00000100345|ENST00000216181|MYH9;SYNDIG1-MYH9|1|fusion	90.60085204095205	0.06317133949006545	2				NaN	NaN	0	NaN	7832	3622	11452
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11457	31.466	NaN	6743	30	0	1736.6	0.106				-1	ENMAVPLMP	9	75	509.24066558511396	1016.4667782370279	2	509.24066162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_ENMAVPLM(Oxidation (M))P_	ENSG00000164627|ENST00000287152|KIF6;nc|ENSG00000164627|Q6ZMV9-2|KIF6;nc|ENSG00000164627|Q6ZMV9-3|KIF6;nc|ENSG00000164627|Q6ZMV9-4|KIF6	53.351449002276354	0.2690372970092375	2				NaN	NaN	0	NaN	7833	3622	11452
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11458	31.468	NaN	8707.3	30	0	1121.7	0.106				-1	LNIKMSHFL	9	79	373.5392534855331	NaN	0	373.5382080078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_LNIKM(Oxidation (M))SHFL_	MS4A1|p.I143M|1|0.16|ENSG00000156738|chr11:60466013-60466013|T/G|missense_variant	37.81151784470057	0.28666463014928195	2				NaN	NaN	0	NaN	7834	3622	11452
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11459	31.47	NaN	3764	30	0	583.39	0.034	+			211	AALPAQQPL	9	62	454.76348649539585	907.5124200575917	2	454.7633056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AALPAQQPL_	ENSG00000225614|ENST00000565624|ZNF469;ZNF469|p.A3754Rfs*17|1|0.31|ENSG00000225614|chr16:88438809-88438810|-/C|frameshift_variant;ZNF469|p.D3286Tfs*124|1|0.31|ENSG00000225614|chr16:88437405-88437405|C/-|frameshift_variant;ZNF469|p.R3417Gfs*56|2|0.61|ENSG00000225614|chr16:88437795-88437795|G/-|frameshift_variant;ZNF469|p.R3634Efs*58|4|0.52|ENSG00000225614|chr16:88438444-88438444|G/-|frameshift_variant;ZNF469|p.R3818Gfs*95|1|0.46|ENSG00000225614|chr16:88439000-88439000|C/-|frameshift_variant	38.80614096846853	0.43426287593479557	2				NaN	NaN	0	NaN	7835	3622	11452
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11471	31.495	NaN	48667	30	0	5837.3	0.214	+			34787	RYLEGTSCI	9	84	549.766145677619	1097.5177384220378	2	549.766357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_RYLEGTSC(Carbamidomethyl (C))I_	ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1	127.46168284122857	0.016682644177004526	2				NaN	NaN	0	NaN	7844	3625	11470
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11472	31.498	NaN	24371	30	0	3324.5	0.106	+			14374	GTAGNGWFNK	10	95	526.2519356063815	1050.489318279563	2	526.2515258789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTAGNGWFNK_	ENST00000525241.1_1_11:35211476-35226207:+|nuORF;ENST00000534296.5_1_11:35211476-35226207:+|nuORF	145.15565482312357	0.00937948146126426	2				NaN	NaN	0	NaN	7845	3625	11470
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11473	31.501	NaN	33576	30	0	4257.7	0.106	+			35405	SAQSFFENK	9	86	529.251591351476	NaN	0	529.2516479492188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAQSFFENK_	ENSG00000136758|ENST00000376016|YME1L1;nc|ENSG00000136758|Q96TA2-3|YME1L1;nc|ENSG00000136758|Q96TA2|YME1L1;YME1L1|p.N311Tfs*18|1|0.26|ENSG00000136758|chr10:27134053-27134053|T/-|frameshift_variant	154.0112374973812	0.005625922044211051	2				NaN	NaN	0	NaN	7846	3625	11470
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11474	31.502	NaN	8021.6	30	0	2642.5	0.106	+			12983	GETSTDLKL	9	66	482.2532157064822	962.4918784797644	2	482.2529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GETSTDLKL_	ENSG00000144028|ENST00000323853|SNRNP200;ENST00000480242.1_1_2:96950056-96950410:-|nuORF;ENST00000497539.5_1_2:96940752-96950410:-|nuORF	110.11987700582712	0.028875675806141952	2				NaN	NaN	0	NaN	7847	3625	11470
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11475	31.504	NaN	20390	30	0	1300.9	0.106	+			50430	YACEVTHQGL	10	90	560.7584407121968	1119.5023284911936	2	561.2638549804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YACEVTHQGL_	nc|ENSG00000211592|P01834|IGKC	53.08895987439943	0.42869529153390606	2				NaN	NaN	0	NaN	7848	3625	11470
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11476	31.506	NaN	7966.2	30	0	742.5	0.106	+			33259	RGFHGTNKF	9	80	532.2767618811326	1062.5389708290652	2	532.2799682617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RGFHGTNKF_	tr|U7SH01|U7SH01_FUSNUDUF3990domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02187PE=4SV=1	60.11826168202944	0.21262886028301267	2				NaN	NaN	0	NaN	7849	3625	11470
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11477	31.508	NaN	7253.6	30	0	884.54	0.034	+			7005	CRPLHYIA	8	76	486.75934998469245	971.5041470361849	2	486.7587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_CRPLHYIA_	OR2G6|p.R131H|1|0.1|ENSG00000188558|chr1:248522038-248522038|G/A|missense_variant	54.76467175910256	0.5536104764165384	2				NaN	NaN	0	NaN	7850	3625	11470
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11492	31.539	NaN	10813	30	0	1637.7	0.214				-1	 	0	80	336.53411418053076	1006.5805131417924	3	336.5343322753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7862	3628	11491
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11493	31.542	NaN	11418	30	0	728.21	0.106	+			105	AAEEGLREL	9	80	494.25798166517524	986.5014103971505	2	494.2586669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAEEGLREL_	ENSG00000167657|ENST00000545797|DAPK3;ENST00000595279.1_1_19:3959101-3961233:-|nuORF	59.93077597824379	0.21419174904018318	2				NaN	NaN	0	NaN	7863	3628	11491
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11494	31.544	NaN	7670.8	30	0	933.23	0.106	+			28880	NQEKHFYTF	9	76	607.2860077310594	1212.5574625289187	2	607.2860107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NQEKHFYTF_	DIS3|p.F775Lfs*30|1|0.43|ENSG00000083520|chr13:72761940-72761940|A/-|frameshift_variant;ENSG00000083520|ENST00000377767|DIS3	89.02883481214508	0.06760336634167786	2				NaN	NaN	0	NaN	7864	3628	11491
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11495	31.546	NaN	7524.6	30	0	748.93	0.106	+			20355	KESEVYKML	9	75	563.794915192176	NaN	0	563.7947387695312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KESEVYKML_	ENSG00000107438|ENST00000329399|PDLIM1;PDLIM1|p.D191N|1|0.47|ENSG00000107438|chr10:95247329-95247329|C/T|missense_variant	70.8162118820467	0.10318768208603292	2				NaN	NaN	0	NaN	7865	3628	11491
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11496	31.548	NaN	4503.3	30	0	470.04	0.106	+			35375	SAPSTQQVL	9	58	465.74827281444635	929.4819926956927	2	465.7483825683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SAPSTQQVL_	ENSG00000106290|ENST00000453269|TAF6;nc|ENSG00000106290|P49848-2|TAF6;nc|ENSG00000106290|P49848-3|TAF6;nc|ENSG00000106290|P49848-4|TAF6	77.31757898189308	0.1091473830098891	2				NaN	NaN	0	NaN	7866	3628	11491
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11497	31.55	NaN	3747.9	30	0	401.2	0.035	+			16786	HPANSFYY	8	72	499.7235984783247	997.4326440234494	2	499.7236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HPANSFYY_	ENSG00000159674|ENST00000290902|SPON2;ENST00000509697.1_1_4:1164106-1164795:-|nuORF;SPON2|p.R229W|1|0.21|ENSG00000159674|chr4:1170528-1170528|G/A|missense_variant	83.28718786952967	0.2977916691876266	2				NaN	NaN	0	NaN	7867	3628	11491
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11498	31.55	NaN	4425.5	30	0	611.54	0.14	+			26900	LWVTKTRL	8	73	508.8161520909271	1015.6177512486543	2	508.8130798339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LWVTKTRL_	ENSG00000164933|ENST00000297578|SLC25A32	37.15910966729921	0.6739408393984688	2				NaN	NaN	0	NaN	7868	3628	11491
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11510	31.577	NaN	69794	30	0	8953	0.214	+			37067	SISDKFFQK	9	110	550.2925511493439	1098.5705493654878	2	550.29345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SISDKFFQK_	ENSG00000089472|ENST00000343002|HEPH;HEPH|p.R1086Qfs*4|1|0.29|ENSG00000089472|chrX:66266444-66266445|-/C|frameshift_variant;nc|ENSG00000089472|Q9BQS7-2|HEPH;nc|ENSG00000089472|Q9BQS7-3|HEPH;nc|ENSG00000089472|Q9BQS7-4|HEPH	154.1183686248401	0.005909203230691971	2				NaN	NaN	0	NaN	7877	3631	11509
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11511	31.581	NaN	27421	30	0	4171.9	0.106				-1	 	0	77	372.2016819540269	742.3888109748539	2	372.2018127441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7878	3631	11509
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11512	31.583	NaN	10912	30	0	1352.3	0.106	+			50431	YACEVTHQGL	10	80	560.7584407121968	1119.5023284911936	2	560.7593994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YACEVTHQGL_	nc|ENSG00000211592|P01834|IGKC	63.53385203322761	0.33370026130094593	2				NaN	NaN	0	NaN	7879	3631	11509
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11513	31.585	NaN	5625.2	30	0	491.78	0.106	+			8928	EEVSNLKTL	9	67	516.782360503596	1031.550168073992	2	516.784423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EEVSNLKTL_	ENSG00000155506|ENST00000518297|LARP1;LARP1|p.D583Tfs*12|1|0.38|ENSG00000155506|chr5:154802262-154802262|G/-|frameshift_variant;nc|ENSG00000155506|Q6PKG0-3|LARP1	120.8684288430529	0.02067403653475984	2				NaN	NaN	0	NaN	7880	3631	11509
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11514	31.587	NaN	4631	30	0	1052.7	0.106			+	23878	LDGPCPNGP	9	61	435.1953748592978	868.3761967853956	2	435.1954650878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LDGPCPNGP_	REV__ENSG00000127252|ENST00000264735|PLAAT1;REV__nc|ENSG00000127252|Q9HDD0-2|PLAAT1	37.15910966729921	0.4535818937225704	2				NaN	NaN	0	NaN	7881	3631	11509
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11515	31.589	NaN	6065.7	30	0	1269.7	0.106			+	-1	NSFPCFVHI	9	75	374.1794807547078	1119.5166128643234	3	374.1797790527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_NSFPC(Carbamidomethyl (C))FVHI_	REV__L1MD2_dup3350|chr5:176309943-176310863:+|2.4169742649477106|0.265229905058228|3.19|483.0|50|1|anti-sense	24.519189625965996	0.574102787014149	2				NaN	NaN	0	NaN	7882	3631	11509
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11516	31.59	NaN	3556.9	30	0	746.04	0.034	+			2233	ALSNPILNK	9	62	485.2901212369985	968.565689540797	2	485.289794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ALSNPILNK_	ENSG00000132436|ENST00000433017|FIGNL1;FIGNL1|p.K309Sfs*16|2|0.21|ENSG00000132436|chr7:50446362-50446362|T/-|frameshift_variant;nc|ENSG00000132436|Q6PIW4-2|FIGNL1	77.31757898189308	0.1091473830098891	2				NaN	NaN	0	NaN	7883	3631	11509
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11529	31.618	NaN	30374	30	0	17764	0.214				-1	 	0	80	350.20662583873616	698.3986987442723	2	350.2066955566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7893	3634	11528
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11530	31.621	NaN	29184	30	0	2343.4	0.106	+			35692	SDIQVKEL	8	83	466.25840929488686	930.5022656565737	2	466.258056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SDIQVKEL_	ENSG00000117632|ENST00000455785|STMN1;ENST00000465604.1_1_1:26229981-26231212:-|nuORF;nc|ENSG00000117632|P16949-2|STMN1	112.41091882917199	0.2438316832735406	2				NaN	NaN	0	NaN	7894	3634	11528
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11531	31.623	NaN	20831	30	0	2285.6	0.106			+	43784	TLKNADSTLIQ	11	84	602.3331427449948	1202.6517325567895	2	602.3330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TLKNADSTLIQ_	REV__ADGRG7|p.V664Ffs*4|1|0.11|ENSG00000144820|chr3:100668952-100668952|A/-|frameshift_variant;REV__ENSG00000144820|ENST00000273352|ADGRG7	106.68306549817024	0.04687082315084998	2				NaN	NaN	0	NaN	7895	3634	11528
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11532	31.625	NaN	9761.5	30	0	868.03	0.106	+			4572	ATLEIVTDK	9	82	495.27944023500305	988.5443275368061	2	495.2793273925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATLEIVTDK_	ENSG00000120705|ENST00000360541|ETF1;nc|ENSG00000120705|P62495-2|ETF1	81.52500206392136	0.09095445986635249	2				NaN	NaN	0	NaN	7896	3634	11528
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11533	31.627	NaN	8106.5	30	0	946.4	0.106	+			38531	SSDIQVKEL	9	69	509.7745967951131	1017.5346406570262	2	509.7745361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSDIQVKEL_	ENSG00000117632|ENST00000455785|STMN1;ENST00000465604.1_1_1:26229981-26231212:-|nuORF;nc|ENSG00000117632|P16949-2|STMN1	59.93077597824379	0.21419174904018318	2				NaN	NaN	0	NaN	7897	3634	11528
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11534	31.628	NaN	3387.2	30	0	268.98	0.106	+			43851	TLVLWNCDI	9	71	538.7743832709932	1075.5342136087863	2	538.77490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TLVLWNCDI_	ENSG00000022556|ENST00000448584|NLRP2;ENST00000540597.5_1_19:55501708-55512263:+|nuORF;nc|ENSG00000022556|Q9NX02-2|NLRP2;nc|ENSG00000022556|Q9NX02-4|NLRP2;nc|ENSG00000022556|Q9NX02-5|NLRP2;NLRP2|p.N1038Tfs*4|2|0.38|ENSG00000022556|chr19:55000816-55000816|A/-|frameshift_variant	51.19269402634007	0.2889735674168909	2				NaN	NaN	0	NaN	7898	3634	11528
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11535	31.63	NaN	5753	30	0	752.07	0.037	+			39733	STISLQMGTNK	11	75	590.3062503362462	1178.5979477392923	2	590.3062133789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STISLQMGTNK_	ENSG00000064666|ENST00000263097|CNN2;ENSG00000117519|ENST00000370206|CNN3;nc|ENSG00000064666|Q99439-2|CNN2;nc|ENSG00000117519|Q15417-2|CNN3;nc|ENSG00000117519|Q15417-3|CNN3	108.31271852315183	0.04350174712075085	2				NaN	NaN	0	NaN	7899	3634	11528
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11550	31.662	NaN	6568	30	0	1391	0.214	+			17855	IFSEHSCL	8	65	496.7272829427019	991.4400129522038	2	496.7285461425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_IFSEHSC(Carbamidomethyl (C))L_	ENSG00000197961|ENST00000320451|ZNF121	76.84663266511073	0.3498490246073164	2				NaN	NaN	0	NaN	7911	3637	11549
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11551	31.665	NaN	6746.1	30	0	1580.1	0.106				-1	LSIPYTCLP	9	72	532.2767618811326	1062.5389708290652	2	532.2745361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LSIPYTC(Carbamidomethyl (C))LP_	ENSG00000136404|ENST00000322019|TM6SF1;nc|ENSG00000136404|Q9BZW5-2|TM6SF1	55.50420428727701	0.2510918378945873	2				NaN	NaN	0	NaN	7912	3637	11549
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11552	31.667	NaN	6739.4	30	0	954.32	0.106			+	-1	CAQCSDLSTR	10	71	599.253437022688	1196.492321112176	2	599.2531127929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))AQC(Carbamidomethyl (C))SDLSTR_	REV__ENSG00000142621|ENST00000688493|FHAD1;REV__ENST00000471347.5_1_1:15654853-15671627:+|nuORF;REV__ENST00000472131.5_1_1:15653545-15656069:+|nuORF;REV__nc|ENSG00000142621|B1AJZ9-3|FHAD1;REV__nc|ENSG00000142621|B1AJZ9-4|FHAD1;REV__nc|ENSG00000142621|B1AJZ9|FHAD1	20.83715455343099	0.7096666582730032	2				NaN	NaN	0	NaN	7913	3637	11549
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11553	31.669	NaN	8882.5	30	0	911.33	0.106	+			4902	ATQILSVPK	9	73	478.79244190366495	955.5703308741299	2	478.7919616699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATQILSVPK_	nc|ENSG00000120802|P42166|TMPO	94.4091291819064	0.0524345700464502	2				NaN	NaN	0	NaN	7914	3637	11549
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11554	31.671	NaN	5905.1	30	0	1325.1	0.106			+	11746	FSHHYSFAK	9	72	562.2695355383909	1122.5245181435816	2	562.2716674804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FSHHYSFAK_	REV__ENSG00000188868|ENST00000293725|ZNF563;REV__nc|ENSG00000188868|Q8TA94-2|ZNF563	55.50420428727701	0.2510918378945873	2				NaN	NaN	0	NaN	7915	3637	11549
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11555	31.673	NaN	5644.6	30	0	880.76	0.037	+			34834	RYPDSHQLF	9	73	581.7862681321244	1161.5579833310487	2	581.7861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RYPDSHQLF_	ENSG00000138757|ENST00000359707|G3BP2;nc|ENSG00000138757|Q9UN86-2|G3BP2	42.86426827375447	0.38666266728046506	2				NaN	NaN	0	NaN	7916	3637	11549
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11556	31.673	NaN	3775.2	30	0	391.97	0.141			+	48390	VTIANATAL	9	54	437.25530972248504	NaN	0	437.2550048828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VTIANATAL_	REV__ENSG00000230561|ENST00000514853|CCDC192;REV__nc|ENSG00000230561|P0DO97|CCDC192	69.6276240434122	0.10825701912424071	2				NaN	NaN	0	NaN	7917	3637	11549
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11567	31.7	NaN	24398	30	0	3649.2	0.214	+			48549	VTNWDDMEK	9	79	569.2481621500365	1136.4817713668729	2	569.2484130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTNWDDMEK_	ACTB|p.I85T|1|0.1|ENSG00000075624|chr7:5529270-5529270|A/G|missense_variant;ENSG00000075624|ENST00000646664|ACTB;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENST00000436287.1_1_1:224052226-224052508:-|nuORF;ENST00000457622.1_1_6:46172676-46173294:+|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000502306.1_1_5:15450853-15451165:+|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF	150.81021883065287	0.006680279908938716	2				NaN	NaN	0	NaN	7925	3640	11566
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11568	31.704	NaN	25664	30	0	2223	0.106	+			10633	EYNTVASKF	9	85	529.7608250429221	1057.507097152644	2	529.761474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EYNTVASKF_	ENSG00000173193|ENST00000474629|PARP14;ENST00000475640.1_1_3:122437249-122439770:+|nuORF;nc|ENSG00000173193|Q460N5-1|PARP14;nc|ENSG00000173193|Q460N5-3|PARP14;nc|ENSG00000173193|Q460N5-4|PARP14;nc|ENSG00000173193|Q460N5-5|PARP14	138.06239232086	0.011389075116295402	2				NaN	NaN	0	NaN	7926	3640	11566
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11569	31.706	NaN	6808.3	30	0	1990	0.106	+			9972	ERGGVVTSNPL	11	68	564.8043026210999	1127.5940523089996	2	564.8043823242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ERGGVVTSNPL_	ENSG00000072778|ENST00000356839|ACADVL;ENST00000578033.1_1_17:7127960-7128413:+|nuORF;ENST00000578319.5_1_17:7127738-7128413:+|nuORF;ENST00000578711.1_1_17:7128236-7128413:+|nuORF;nc|ENSG00000072778|P49748-2|ACADVL;nc|ENSG00000072778|P49748-3|ACADVL	31.068146907933308	0.6639116734509778	2				NaN	NaN	0	NaN	7927	3640	11566
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11570	31.708	NaN	7509.4	30	0	620.04	0.106			+	19500	KATRATFPVT	10	80	546.313646647527	1090.6127403618539	2	546.314208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KATRATFPVT_	REV__nc|ENSG00000157827|Q96PY5|FMNL2	61.691277971877994	0.35045824941635534	2				NaN	NaN	0	NaN	7928	3640	11566
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11571	31.71	NaN	8195.3	30	0	606.8	0.106			+	34865	RYTEVEQATR	10	77	626.8172747566667	1251.6199965801334	2	626.8182373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RYTEVEQATR_	REV__DDX5|p.D424Ifs*31|1|0.03|ENSG00000108654|chr17:64500720-64500721|-/AAGCAATTAAT|frameshift_variant;REV__DDX5|p.D572Nfs*6|1|0.04|ENSG00000108654|chr17:64500054-64500055|-/TGACAAGATAGTT|frameshift_variant;REV__DDX5|p.R502Gfs*87|1|0.21|ENSG00000108654|chr17:64500264-64500264|T/-|frameshift_variant;REV__ENSG00000108654|ENST00000225792|DDX5;REV__ENST00000581230.5_1_17:62498125-62502378:-|nuORF;REV__nc|ENSG00000108654|P17844-2|DDX5	67.49366992349736	0.29779660154124327	2				NaN	NaN	0	NaN	7929	3640	11566
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11572	31.711	NaN	3214.5	30	0	664.12	0.106	+			7362	DDGLHQFL	8	67	472.7272245574513	943.4398961817026	2	472.72723388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DDGLHQFL_	ENSG00000112276|ENST00000314641|BVES	33.51558372728122	0.7005509609380386	2				NaN	NaN	0	NaN	7930	3640	11566
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11573	31.713	NaN	5471.2	30	0	916.85	0.035	+			7399	DEFGHTSQL	9	68	517.2329697657335	1032.451386598267	2	517.2327880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DEFGHTSQL_	ENSG00000101596|ENST00000320876|SMCHD1;nc|ENSG00000101596|A6NHR9-2|SMCHD1;SMCHD1|p.D1006Kfs*40|1|0.32|ENSG00000101596|chr18:2729370-2729371|-/AA|frameshift_variant;SMCHD1|p.D1006Tfs*39|2|0.32|ENSG00000101596|chr18:2729371-2729371|A/-|frameshift_variant	67.49366992349736	0.1516260258713357	2				NaN	NaN	0	NaN	7931	3640	11566
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11586	31.741	NaN	19574	30	0	2358.9	0.214			+	18114	ILCSRRHTN	9	84	578.8038249965425	1155.593097059885	2	578.8043212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_ILC(Carbamidomethyl (C))SRRHTN_	REV__ENST00000442177.1_1_2:209073395-209073674:+|nuORF	52.936696900407355	0.27249468807391813	2				NaN	NaN	0	NaN	7941	3643	11585
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11587	31.745	NaN	10005	30	0	780.8	0.106	+			16764	HMATCGNVLFE	11	74	611.2733348057959	1220.5321166783917	2	611.2732543945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HMATCGNVLFE_	AGTPBP1|p.K1079Nfs*10|1|0.38|ENSG00000135049|chr9:85579025-85579025|T/-|frameshift_variant;AGTPBP1|p.S1080Ifs*2|1|0.29|ENSG00000135049|chr9:85579024-85579025|-/T|frameshift_variant;ENSG00000135049|ENST00000357081|AGTPBP1;nc|ENSG00000135049|Q9UPW5-2|AGTPBP1;nc|ENSG00000135049|Q9UPW5-3|AGTPBP1	67.49366992349736	0.25663419177724	2				NaN	NaN	0	NaN	7942	3643	11585
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11588	31.747	NaN	7399.3	30	0	2188.1	0.106	+			16791	HPDAPMSQVY	10	73	572.7586388520053	1143.5027247708106	2	572.7589111328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HPDAPMSQVY_	ENSG00000123562|ENST00000441076|MORF4L2;ENSG00000185787|ENST00000426013|MORF4L1;ENST00000560710.1_1_15:79184565-79186592:+|nuORF;nc|ENSG00000185787|Q9UBU8-3|MORF4L1;nc|ENSG00000185787|Q9UBU8|MORF4L1	44.377184641726394	0.5088115166961078	2				NaN	NaN	0	NaN	7943	3643	11585
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11589	31.748	NaN	5585.5	30	0	734.5	0.106	+			27470	MLRAEQND	8	68	496.7272829427019	991.4400129522038	2	497.2269592285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_M(Oxidation (M))LRAEQND_	ENSG00000111319|ENST00000228916|SCNN1A;ENST00000366131.6_1_12:6462937-6464599:-|nuORF;nc|ENSG00000111319|P37088-2|SCNN1A;nc|ENSG00000111319|P37088-5|SCNN1A;nc|ENSG00000111319|P37088-6|SCNN1A	45.9519527083369	0.6193794311207887	2				NaN	NaN	0	NaN	7944	3643	11585
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11590	31.75	NaN	10449	30	0	1370.8	0.106	+			1329	AETILKNNI	9	74	508.29255712998156	1014.5705613267631	2	508.2932434082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AETILKNNI_	ENSG00000124214|ENST00000371856|STAU1;nc|ENSG00000124214|O95793-2|STAU1;nc|ENSG00000124214|O95793-3|STAU1	107.00750918261382	0.032051501805654005	2				NaN	NaN	0	NaN	7945	3643	11585
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11591	31.752	NaN	3759.8	30	0	267.31	0.106	+			15653	GVLRPGTAL	9	65	442.27152710025894	882.5285012673179	2	442.2718505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GVLRPGTAL_	ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1	56.72105179125745	0.24094814563026265	2				NaN	NaN	0	NaN	7946	3643	11585
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11592	31.754	NaN	4528	30	0	388.31	0.035	+			38779	SSMGPVAHSI	10	63	493.24253616441456	984.4705193956291	2	493.24237060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSMGPVAHSI_	CSRNP3|p.V309I|1|0.29|ENSG00000178662|chr2:165678920-165678920|G/A|missense_variant	58.78195531508484	0.37691818691852547	2				NaN	NaN	0	NaN	7947	3643	11585
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11608	31.787	NaN	18419	30	0	1789.3	0.214			+	16629	HHFSLFLR	8	91	528.790084307475	1055.56561568175	2	528.790283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HHFSLFLR_	REV__HERV1_I-int_dup2|chr3:34679996-34686397:+|1.0948245018220069|0.0565463038051543|4.28|448.0|241|1|anti-sense	76.84663266511073	0.3498490246073164	2				NaN	NaN	0	NaN	7960	3646	11607
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11609	31.791	NaN	18721	30	0	1511.8	0.106	+			20082	KEKGTWVQL	9	87	544.808603585226	1087.602654237252	2	544.8087158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEKGTWVQL_	ENSG00000122026|ENST00000311549|RPL21;ENST00000406094.1_1_6:107090584-107090800:+|nuORF;ENST00000483765.5_1_13:27827977-27830662:+|nuORF	99.78786539795823	0.03941834715970116	2				NaN	NaN	0	NaN	7961	3646	11607
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11610	31.793	NaN	29609	30	0	4403.6	0.106	+			35233	SALEHSIQY	9	83	524.2593623919608	1046.5041718507216	2	524.2596435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SALEHSIQY_	ENSG00000121691|ENST00000241052|CAT;ENST00000525707.1_1_11:34482779-34490041:+|nuORF	65.46538089061403	0.16805504838372562	2				NaN	NaN	0	NaN	7962	3646	11607
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11611	31.794	NaN	10810	30	0	1498.5	0.106	+			192	AALDWVTKK	9	86	516.2979203471685	1030.581287761137	2	516.2978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AALDWVTKK_	ENSG00000227057|ENST00000374617|WDR46;ENST00000488944.5_1_6:33255341-33255794:-|nuORF	150.36159442982594	0.006784847064083231	2				NaN	NaN	0	NaN	7963	3646	11607
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11612	31.796	NaN	14786	30	0	11076	0.106	+			35346	SAPEPRVTL	9	63	485.2717700397413	968.5289871462826	2	485.27154541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SAPEPRVTL_	CC2D1A|p.A219V|1|0.22|ENSG00000132024|chr19:13913546-13913546|C/T|missense_variant;CC2D1A|p.G898Vfs*45|1|0.32|ENSG00000132024|chr19:13929638-13929638|G/-|frameshift_variant;CC2D1A|p.P344Tfs*59|1|0.39|ENSG00000132024|chr19:13918916-13918917|-/C|frameshift_variant;ENSG00000132024|ENST00000318003|CC2D1A;ENST00000585896.5_1_19:14020678-14030767:+|nuORF;nc|ENSG00000132024|Q6P1N0-2|CC2D1A	45.02220120713402	0.3613509778819777	2				NaN	NaN	0	NaN	7964	3646	11607
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11613	31.798	NaN	5429.8	30	0	593.17	0.034			+	26474	LTLCHLQF	8	75	487.7608688506377	973.5071847680754	2	487.7607727050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LTLCHLQF_	REV__ENST00000581193.5_1_18:3277909-3278131:+|nuORF	60.97194046774394	0.49215940876911696	2				NaN	NaN	0	NaN	7965	3646	11607
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11614	31.799	NaN	12954	30	0	6475.9	0.144	+			34804	RYLEKPMEI	9	74	393.54627848759503	1177.6170060629852	3	393.5462341308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RYLEKPMEI_	ENSG00000168610|ENST00000264657|STAT3;nc|ENSG00000168610|P40763-2|STAT3;nc|ENSG00000168610|P40763-3|STAT3;STAT3|p.R729Afs*3|2|0.33|ENSG00000168610|chr17:42316861-42316861|G/-|frameshift_variant	39.252832667884924	0.4290233611298554	2				NaN	NaN	0	NaN	7966	3646	11607
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11625	31.826	NaN	17693	30	0	2402.2	0.214			+	-1	DVAARAMD	8	56	432.69806355135245	863.3815741695049	2	432.69757080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_DVAARAM(Oxidation (M))D_	REV__ENSG00000137675|ENST00000260229|MMP27	71.29570347882199	0.39610197767395533	2				NaN	NaN	0	NaN	7974	3649	11624
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11626	31.83	NaN	8550.3	30	0	908.42	0.106	+			7797	DPHTVTVSM	9	73	493.7342088333144	985.4538647334289	2	493.7340087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DPHTVTVSM_	BRD8|p.G620Wfs*10|1|0.17|ENSG00000112983|chr5:138164101-138164102|-/A|frameshift_variant;BRD8|p.P1065Lfs*29|1|0.14|ENSG00000112983|chr5:138149724-138149724|G/-|frameshift_variant;ENSG00000112983|ENST00000254900|BRD8;nc|ENSG00000112983|Q9H0E9-2|BRD8;nc|ENSG00000112983|Q9H0E9-3|BRD8;nc|ENSG00000112983|Q9H0E9-4|BRD8	90.77665401227738	0.06267569666681755	2				NaN	NaN	0	NaN	7975	3649	11624
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11627	31.832	NaN	5414.1	30	0	670.75	0.106				-1	 	0	61	386.2382974414612	385.2310209748612	1	386.236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7976	3649	11624
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11628	31.834	NaN	11694	30	0	1635.6	0.106				-1	 	0	74	573.3379361257035	1144.661319318207	2	573.3374633789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7977	3649	11624
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11629	31.835	NaN	4275.4	30	0	504.45	0.106			+	1391	AEVNPGRVY	9	68	502.76236826673437	1003.5101836002688	2	502.7621765136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEVNPGRVY_	REV__ARFGEF2-SULF2|1|fusion;REV__ARFGEF2-SULF2|2|fusion;REV__ENSG00000196562|ENST00000688720|SULF2;REV__nc|ENSG00000196562|Q8IWU5-2|SULF2	68.78682469695295	0.14603441672067394	2				NaN	NaN	0	NaN	7978	3649	11624
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11630	31.837	NaN	3604.8	30	0	331.63	0.106			+	-1	VTPVSCKKM	9	72	533.277076002972	1064.5395990727438	2	533.27392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),Oxidation (M)	_VTPVSC(Carbamidomethyl (C))KKM(Oxidation (M))_	REV__ENSG00000151388|ENST00000504830|ADAMTS12;REV__nc|ENSG00000151388|P58397-3|ADAMTS12	56.72105179125745	0.24094814563026265	2				NaN	NaN	0	NaN	7979	3649	11624
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11631	31.839	NaN	3491.1	30	0	313.84	0.034			+	24022	LEEETVLI	8	68	473.25948673415417	NaN	0	473.2607116699219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LEEETVLI_	REV__ENSG00000103047|ENST00000261778|TANGO6	50.0245360154114	1.7418937515398478	2				NaN	NaN	0	NaN	7980	3649	11624
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11642	31.864	NaN	29942	30	0	6977.8	0.215	+			43997	TPHSYIDTY	9	88	548.7511626001258	1095.4877722670515	2	548.7516479492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TPHSYIDTY_	ENSG00000182240|ENST00000330333|BACE2;ENST00000491838.5_1_21:42598231-42618026:+|nuORF;nc|ENSG00000182240|Q9Y5Z0-2|BACE2;nc|ENSG00000182240|Q9Y5Z0-3|BACE2;nc|ENSG00000182240|Q9Y5Z0-4|BACE2;nc|ENSG00000182240|Q9Y5Z0-5|BACE2	143.10689835833298	0.00902249513149409	2				NaN	NaN	0	NaN	7988	3652	11641
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11643	31.868	NaN	6982.4	30	0	581.11	0.106	+			1217	AEQKVEYTL	9	76	540.7805050752896	1079.5464572173792	2	540.7830810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEQKVEYTL_	ENSG00000114867|ENST00000346169|EIF4G1;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;ENST00000460829.5_1_3:184046782-184052693:+|nuORF;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1	63.53385203322761	0.18415635464017938	2				NaN	NaN	0	NaN	7989	3652	11641
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11644	31.87	NaN	3401.5	30	0	1826.4	0.106				-1	 	0	52	322.19346983889466	642.3723867445893	2	322.19378662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	7990	3652	11641
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11645	31.872	NaN	4518.9	30	0	514.53	0.106	+			30723	QDIQNKLDEV	10	80	601.3057925767469	1200.5970322202936	2	601.3062133789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QDIQNKLDEV_	ENSG00000186648|ENST00000342740|CARMIL3;ENST00000559694.5_1_14:24530705-24534560:+|nuORF	50.79123845855914	0.44970922346023856	2				NaN	NaN	0	NaN	7991	3652	11641
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11646	31.873	NaN	4402.2	30	0	483.98	0.106	+			34805	RYLEKPMEI	9	78	589.8158169429527	1177.6170809527052	2	589.8157958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RYLEKPMEI_	ENSG00000168610|ENST00000264657|STAT3;nc|ENSG00000168610|P40763-2|STAT3;nc|ENSG00000168610|P40763-3|STAT3;STAT3|p.R729Afs*3|2|0.33|ENSG00000168610|chr17:42316861-42316861|G/-|frameshift_variant	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	7992	3652	11641
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11647	31.875	NaN	4614.4	30	0	400.07	0.106	+			744	AEDKNRLL	8	66	479.7713691589841	NaN	0	479.771728515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEDKNRLL_	DYNC2H1|p.F2761Lfs*20|1|0.09|ENSG00000187240|chr11:103203742-103203742|T/-|frameshift_variant;DYNC2H1|p.L4021Wfs*5|1|0.3|ENSG00000187240|chr11:103358262-103358262|T/-|frameshift_variant;DYNC2H1|p.P3966Hfs*44|1|0.22|ENSG00000187240|chr11:103321194-103321194|T/-|frameshift_variant;ENSG00000187240|ENST00000375735|DYNC2H1;nc|ENSG00000187240|Q8NCM8-2|DYNC2H1	50.0245360154114	1.7418937515398478	2				NaN	NaN	0	NaN	7993	3652	11641
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11648	31.877	NaN	3118.5	30	0	273.64	0.037			+	21381	KMKKRLRPT	9	71	587.3640779562239	1172.7136029792478	2	587.3646240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_KM(Oxidation (M))KKRLRPT_	REV__ENST00000461096.6_1_1:109608842-109618580:-|nuORF	58.78195531508484	0.22376836668196862	2				NaN	NaN	0	NaN	7994	3652	11641
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11661	31.905	NaN	8323.4	30	0	1054.6	0.214	+			39731	STISIFHCK	9	75	518.2679164811541	1034.521280029108	2	518.2683715820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STISIFHCK_	ENST00000554584.5_1_14:64375879-64407376:+|nuORF	101.60071028292904	0.0375685401170269	2				NaN	NaN	0	NaN	8004	3655	11660
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11662	31.908	NaN	7894.4	30	0	633.02	0.106			+	30405	PVTELKDTY	9	76	533.277076002972	1064.5395990727438	2	533.7804565429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PVTELKDTY_	REV__ENSG00000181585|ENST00000643606|TMIE	29.14955571784316	0.5308295550522326	2				NaN	NaN	0	NaN	8005	3655	11660
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11663	31.911	NaN	9024	30	0	1629.5	0.106	+			6509	AYAPPPHVI	9	73	482.7662382760919	963.5179236189838	2	482.76593017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AYAPPPHVI_	ENSG00000128335|ENST00000358502|APOL2	85.90917672979207	0.07639869513036507	2				NaN	NaN	0	NaN	8006	3655	11660
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11664	31.912	NaN	6868.1	30	0	1136	0.106				-1	 	0	76	336.53411418053076	1006.5805131417924	3	336.5343017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8007	3655	11660
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11665	31.914	NaN	7954.4	30	0	633.71	0.106	+			6610	AYQKQPTIFQ	10	80	612.3253558174484	1222.6361587016968	2	612.3248291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AYQKQPTIFQ_	ENSG00000142534|ENST00000270625|RPS11;ENST00000599167.5_1_19:49999677-50000690:+|nuORF;ENST00000600027.5_1_19:49999677-50000944:+|nuORF	120.30596017624542	0.026897611020491978	2				NaN	NaN	0	NaN	8008	3655	11660
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11666	31.916	NaN	4507.3	30	0	345.68	0.106	+			30362	PVFAFSHSL	9	68	502.76236826673437	1003.5101836002688	2	502.76275634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PVFAFSHSL_	LTR16D_dup814|chr11:118125155-118125550:+|1.0097989848873832|0.1292670517905187|2.97|478.0|4|1|sense	39.252832667884924	0.4290233611298554	2				NaN	NaN	0	NaN	8009	3655	11660
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11667	31.918	NaN	3871	30	0	651.29	0.033			+	6826	CHSPNSPI	8	64	427.6952168627565	853.3758807923131	2	427.69500732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_CHSPNSPI_	REV__EFEMP1|p.R156C|1|0.16|ENSG00000115380|chr2:55917716-55917716|G/A|missense_variant	39.021493756699265	0.6623843612266921	2				NaN	NaN	0	NaN	8010	3655	11660
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11679	31.943	NaN	11459	30	0	2370.4	0.214	+			36008	SEIDTNQNSL	10	82	560.7599122117716	1119.5052714903431	2	560.7598876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEIDTNQNSL_	DAB2|p.F398Lfs*15|1|0.36|ENSG00000153071|chr5:39382765-39382765|A/-|frameshift_variant;ENSG00000153071|ENST00000320816|DAB2;nc|ENSG00000153071|P98082-3|DAB2	117.7056744995986	0.030570130731382417	2				NaN	NaN	0	NaN	8019	3658	11678
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11680	31.947	NaN	11756	30	0	1745.6	0.106	+			36494	SEYDRGVNTF	10	80	594.2701079904743	1186.5256630477486	2	594.2700805664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEYDRGVNTF_	ENSG00000143106|ENST00000271308|PSMA5;ENST00000484563.1_1_1:109955653-109968973:-|nuORF	106.88024417677582	0.05726438866303799	2				NaN	NaN	0	NaN	8020	3658	11678
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11681	31.949	NaN	15297	30	0	1867.3	0.106			+	-1	QNNMHTLDFMT	11	86	692.2866348200097	1382.5587167068193	2	692.2854614257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Oxidation (M)	_QNNM(Oxidation (M))HTLDFM(Oxidation (M))T_	REV__MMRN1|p.T664Ffs*13|1|0.08|ENSG00000138722|chr4:89935669-89935670|-/TTTGATTTAAC|frameshift_variant	29.170058357718403	0.683821074385409	2				NaN	NaN	0	NaN	8021	3658	11678
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11682	31.951	NaN	9079	30	0	690.98	0.106	+			49727	VYNKVHITL	9	82	543.819470493096	1085.624388052992	2	543.8195190429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VYNKVHITL_	ENSG00000166228|ENST00000299299|PCBD1;ENST00000493228.1_1_10:72643709-72647885:-|nuORF	110.11987700582712	0.028875675806141952	2				NaN	NaN	0	NaN	8022	3658	11678
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11683	31.952	NaN	5484.7	30	0	738.7	0.106	+			40506	STYNPSISLK	10	68	555.2956806960786	1108.5768084589572	2	555.2957153320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STYNPSISLK_	ENST00000477171.1_1_3:152017595-152017766:+|nuORF	101.45984612302182	0.07336148045341315	2				NaN	NaN	0	NaN	8023	3658	11678
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11684	31.954	NaN	6050.1	30	0	545.4	0.106	+			12665	GEITGEVHM	9	78	486.7263722506282	971.4381915680564	2	486.72625732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GEITGEVHM_	ENSG00000136068|ENST00000295956|FLNB;ENST00000481470.5_1_3:58118395-58154450:+|nuORF;nc|ENSG00000136068|O75369-2|FLNB;nc|ENSG00000136068|O75369-3|FLNB;nc|ENSG00000136068|O75369-4|FLNB;nc|ENSG00000136068|O75369-5|FLNB;nc|ENSG00000136068|O75369-6|FLNB;nc|ENSG00000136068|O75369-7|FLNB;nc|ENSG00000136068|O75369-8|FLNB;nc|ENSG00000136068|O75369-9|FLNB	76.7741389293348	0.11149722112137898	2				NaN	NaN	0	NaN	8024	3658	11678
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11685	31.956	NaN	3902.2	30	0	552.38	0.036	+			50454	YAEMGTRTF	9	72	538.2483057780277	1074.4820586228552	2	538.2484130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YAEMGTRTF_	ENSG00000102595|ENST00000376747|UGGT2;ENST00000467305.1_1_13:96637506-96665674:-|nuORF;nc|ENSG00000102595|Q9NYU1-2|UGGT2;UGGT2|p.N1268Ifs*10|1|0.3|ENSG00000102595|chr13:95859613-95859613|T/-|frameshift_variant	65.46538089061403	0.16805504838372562	2				NaN	NaN	0	NaN	8025	3658	11678
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11697	31.982	NaN	39855	30	0	7750	0.214	+			23272	KYLDNPNAL	9	91	524.2774119511108	1046.5402709690215	2	524.2776489257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KYLDNPNAL_	ENSG00000197256|ENST00000586659|KANK2;nc|ENSG00000197256|Q63ZY3-2|KANK2;nc|ENSG00000197256|Q63ZY3-3|KANK2	72.87924865735499	0.12833875048249987	2				NaN	NaN	0	NaN	8034	3661	11696
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11698	31.986	NaN	21966	30	0	3903.9	0.106				-1	 	0	84	350.20662583873616	698.3986987442723	2	350.2066955566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8035	3661	11696
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11699	31.988	NaN	6500.2	30	0	853.52	0.106	+			19401	KAPAPKAS	8	67	385.2320011939585	768.4494494547171	2	385.2320556640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KAPAPKAS_	ENSG00000188846|ENST00000396203|RPL14;REV__ENST00000495036.5_1_7:120690925-120691258:+|nuORF	33.51558372728122	0.7005509609380386	2				NaN	NaN	0	NaN	8036	3661	11696
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11700	31.989	NaN	9090.2	30	0	851.25	0.106	+			37068	SISDKFFQK	9	88	550.2925511493439	1098.5705493654878	2	550.2935791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SISDKFFQK_	ENSG00000089472|ENST00000343002|HEPH;HEPH|p.R1086Qfs*4|1|0.29|ENSG00000089472|chrX:66266444-66266445|-/C|frameshift_variant;nc|ENSG00000089472|Q9BQS7-2|HEPH;nc|ENSG00000089472|Q9BQS7-3|HEPH;nc|ENSG00000089472|Q9BQS7-4|HEPH	112.41091882917199	0.026537921851008135	2				NaN	NaN	0	NaN	8037	3661	11696
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11701	31.991	NaN	10987	30	0	5288.4	0.106			+	13509	GLPLRTGPI	9	70	462.28731365067705	922.5600743681541	2	462.28692626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GLPLRTGPI_	REV__ENST00000555567.5_1_14:75421952-75422225:-|nuORF	58.78195531508484	0.22376836668196862	2				NaN	NaN	0	NaN	8038	3661	11696
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11702	31.993	NaN	4983.4	30	0	397.92	0.106	+			12138	GAIAAIMQK	9	67	451.75987223028005	901.5051915273601	2	451.75994873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GAIAAIMQK_	ENSG00000132383|ENST00000254719|RPA1;RPA1|p.N274Mfs*5|1|0.18|ENSG00000132383|chr17:1879272-1879272|A/-|frameshift_variant	106.41520541750704	0.03265588207292361	2				NaN	NaN	0	NaN	8039	3661	11696
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11703	31.995	NaN	6064.5	30	0	659.67	0.034			+	605	ADQTGVLVL	9	74	458.26119327922356	914.5078336252471	2	458.2610168457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ADQTGVLVL_	REV__AGAP1|p.L561Sfs*43|1|0.32|ENSG00000157985|chr2:236036594-236036594|C/-|frameshift_variant;REV__AGAP1|p.N248Ifs*28|1|0.43|ENSG00000157985|chr2:235797827-235797827|A/-|frameshift_variant;REV__ENSG00000157985|ENST00000304032|AGAP1;REV__nc|ENSG00000157985|Q9UPQ3-2|AGAP1;REV__nc|ENSG00000157985|Q9UPQ3-3|AGAP1	53.351449002276354	0.2690372970092375	2				NaN	NaN	0	NaN	8040	3661	11696
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11717	32.024	NaN	11108	30	0	1163.1	0.214	+			43892	TNFEDRNAF	9	81	557.2517898445169	1112.4890267558337	2	557.2520751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TNFEDRNAF_	CYFIP1|p.K121Nfs*2|1|0.14|ENSG00000273749|chr15:22944582-22944582|T/-|frameshift_variant;CYFIP2|p.Q484Rfs*7|1|0.08|ENSG00000055163|chr5:157319855-157319856|-/GA|frameshift_variant;ENSG00000055163|ENST00000620254|CYFIP2;ENSG00000273749|ENST00000617928|CYFIP1;nc|ENSG00000055163|Q96F07|CYFIP2	129.42129120953632	0.01549634589885217	2				NaN	NaN	0	NaN	8051	3664	11716
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11718	32.028	NaN	7247.1	30	0	1384	0.106	+			34835	RYPDSHQLF	9	72	581.7862681321244	1161.5579833310487	2	581.7860717773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RYPDSHQLF_	ENSG00000138757|ENST00000359707|G3BP2;nc|ENSG00000138757|Q9UN86-2|G3BP2	51.19269402634007	0.2889735674168909	2				NaN	NaN	0	NaN	8052	3664	11716
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11719	32.03	NaN	6434.2	30	0	631.09	0.106	+			38071	SPSRTIIQY	9	71	532.7907263919736	1063.5668998507472	2	532.791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SPSRTIIQY_	ENSG00000177000|ENST00000376590|MTHFR;nc|ENSG00000177000|P42898-2|MTHFR	58.22992032128504	0.22837015374068087	2				NaN	NaN	0	NaN	8053	3664	11716
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11720	32.032	NaN	9738.8	30	0	1399.9	0.106	+			1318	AETEPIVKM	9	82	509.2678285807006	1016.5211042282012	2	509.2679443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AETEPIVKM_	ENSG00000104408|ENST00000220849|EIF3E;ENST00000518442.5_1_8:109247181-109261015:-|nuORF	98.62937762414208	0.04060045538121712	2				NaN	NaN	0	NaN	8054	3664	11716
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11721	32.034	NaN	3641.3	30	0	354.25	0.106				-1	GCLGKKLSP	9	65	480.2728335049303	958.5311140766606	2	480.2745361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_GC(Carbamidomethyl (C))LGKKLSP_	ENST00000368009.6_1_1:161090628-161090832:+|nuORF	56.72105179125745	0.24094814563026265	2				NaN	NaN	0	NaN	8055	3664	11716
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11722	32.036	NaN	4767.3	30	0	626.92	0.035	+			37290	SLASLRLFGG	10	66	510.7947767129142	1019.5750004926284	2	510.7953796386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLASLRLFGG_	ENST00000326793.10_2_3:194999558-194999657:-|nuORF	47.657333605630114	0.47858658696240314	2				NaN	NaN	0	NaN	8056	3664	11716
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11723	32.036	NaN	4722.6	30	0	1191.3	0.144				-1	MSNVCPIQR	9	66	374.17959483628016	1119.5169551090405	3	374.1799621582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))SNVC(Carbamidomethyl (C))PIQR_	ENSG00000185775|ENST00000332857|SPATA31A6;ENSG00000204849|ENST00000377647|SPATA31A1;ENSG00000275969|ENST00000428649|SPATA31A3;ENSG00000276040|ENST00000619167|SPATA31A7;ENSG00000276581|ENST00000437823|SPATA31A5;SPATA31A1|p.T1192Nfs*14|1|0.28|ENSG00000204849|chr9:39361333-39361334|-/A|frameshift_variant;SPATA31A1|p.T1192Qfs*2|2|0.24|ENSG00000204849|chr9:39361334-39361334|A/-|frameshift_variant;SPATA31A3|p.S1180Kfs*9|1|0.25|ENSG00000275969|chr9:66986959-66986960|-/T|frameshift_variant;SPATA31A6|p.N1191Tfs*16|1|0.12|ENSG00000185775|chr9:42189269-42189269|A/-|frameshift_variant;SPATA31A6|p.T1188Qfs*2|1|0.26|ENSG00000185775|chr9:42189259-42189259|A/-|frameshift_variant	25.57405402267927	0.5642445186134241	2				NaN	NaN	0	NaN	8057	3664	11716
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11735	32.064	NaN	20928	30	0	3721	0.215	+			1136	AEMAQNAVRL	10	81	551.7874466553474	1101.5603403774946	2	551.7879028320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEMAQNAVRL_	ENSG00000168036|ENST00000349496|CTNNB1	131.61620852596164	0.01298938390812184	2				NaN	NaN	0	NaN	8066	3667	11734
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11736	32.068	NaN	21937	30	0	5673	0.106			+	44025	TPLPTPPVKV	10	81	350.21807189298886	1047.6323862791667	3	350.21826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TPLPTPPVKV_	REV__nc|ENSG00000084234|Q06481-4|APLP2	27.882242232435846	0.6521336255503853	2				NaN	NaN	0	NaN	8067	3667	11734
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11737	32.07	NaN	7501.5	30	0	2179.2	0.106	+			49752	VYPEKLATKF	10	72	598.3397962368684	1194.6650395405368	2	598.3400268554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYPEKLATKF_	ENSG00000136813|ENST00000684092|ECPAS;nc|ENSG00000136813|Q5VYK3|ECPAS	60.69067153575145	0.3595586438680871	2				NaN	NaN	0	NaN	8068	3667	11734
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11738	32.071	NaN	7671.5	30	0	921.79	0.106			+	10007	ERPFDQTSI	9	71	546.7701018357247	1091.5256507382494	2	546.7705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ERPFDQTSI_	REV__ENSG00000087303|ENST00000216286|NID2;REV__nc|ENSG00000087303|Q14112-2|NID2;REV__NID2|p.K1297Nfs*26|1|0.42|ENSG00000087303|chr14:52006650-52006650|T/-|frameshift_variant	77.31757898189308	0.1091473830098891	2				NaN	NaN	0	NaN	8069	3667	11734
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11739	32.073	NaN	8417.7	30	0	802.19	0.106			+	21784	KQTQGKQI	8	74	486.77680969266873	971.5390664521375	2	486.7768859863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))KQTQGKQI_	REV__ENSG00000151229|ENST00000280871|SLC2A13;REV__SLC2A13|p.R264Q|1|0.32|ENSG00000151229|chr12:40028435-40028435|C/T|missense_variant;REV__SLC2A13|p.T491Qfs*41|1|0.08|ENSG00000151229|chr12:39764833-39764833|T/-|frameshift_variant	54.776311868738084	0.5534952410049249	2				NaN	NaN	0	NaN	8070	3667	11734
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11740	32.075	NaN	4759.6	30	0	864.67	0.106			+	46037	VCAADPYKIV	10	67	539.7816215592345	1077.548690185269	2	539.7822875976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VCAADPYKIV_	REV__ABCC10|p.L502P|1|0.23|ENSG00000124574|chr6:43434745-43434745|T/C|missense_variant	51.33545320467046	0.4446945571623749	2				NaN	NaN	0	NaN	8071	3667	11734
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11741	32.077	NaN	4769.2	30	0	626.68	0.035	+			26968	LYKSSTDCL	9	73	515.249444848799	1028.484336764398	2	515.2500610351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LYKSSTDCL_	ENSG00000153291|ENST00000371347|SLC25A27	51.19269402634007	0.2889735674168909	2				NaN	NaN	0	NaN	8072	3667	11734
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11754	32.104	NaN	65188	30	0	8871.3	0.214	+			15683	GVMTVLIKR	9	108	508.81770088648375	1015.6208488397675	2	508.8177795410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVMTVLIKR_	ENSG00000109971|ENST00000534624|HSPA8;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;HSPA8|p.K569Dfs*6|1|0.3|ENSG00000109971|chr11:123058302-123058303|TC/-|frameshift_variant;nc|ENSG00000109971|P11142-2|HSPA8	131.03138772384656	0.014687601201650916	2				NaN	NaN	0	NaN	8082	3670	11753
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11755	32.108	NaN	55280	30	0	36322	0.106				-1	LMGKLAVIR	9	70	339.5473240365547	1015.6201427098641	3	339.54766845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LM(Oxidation (M))GKLAVIR_	ENSG00000175854|ENST00000418976|SWI5;nc|ENSG00000175854|Q1ZZU3|SWI5	44.377184641726394	0.36891676396732553	2				NaN	NaN	0	NaN	8083	3670	11753
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11756	32.11	NaN	18165	30	0	2830.8	0.106			+	6723	CAKLKKGL	8	85	430.77276566712874	859.5309784010575	2	430.7727355957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_CAKLKKGL_	REV__BRIP1|p.I504Nfs*7|1|0.53|ENSG00000136492|chr17:61784387-61784388|-/T|frameshift_variant;REV__ENSG00000136492|ENST00000259008|BRIP1;REV__nc|ENSG00000136492|Q9BX63-2|BRIP1	40.5726180659479	0.6527593143185008	2				NaN	NaN	0	NaN	8084	3670	11753
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11757	32.112	NaN	16217	30	0	1757.8	0.106	+			14064	GSISDKFFQK	10	87	578.8038381839988	1155.5931234347975	2	578.8035888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GSISDKFFQK_	ENSG00000089472|ENST00000343002|HEPH;HEPH|p.R1086Qfs*4|1|0.29|ENSG00000089472|chrX:66266444-66266445|-/C|frameshift_variant;nc|ENSG00000089472|Q9BQS7-2|HEPH;nc|ENSG00000089472|Q9BQS7-3|HEPH;nc|ENSG00000089472|Q9BQS7-4|HEPH	185.71840793949184	0.0006636498492458346	2				NaN	NaN	0	NaN	8085	3670	11753
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11758	32.113	NaN	7291.6	30	0	711.24	0.106			+	12989	GEVAEQQALI	10	79	529.2801253794975	1056.5456978257948	2	529.2802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GEVAEQQALI_	REV__COL3A1|p.G103Dfs*62|1|0.04|ENSG00000168542|chr2:188985219-188985219|A/-|frameshift_variant;REV__COL3A1|p.G786Dfs*5|1|0.33|ENSG00000168542|chr2:189001549-189001549|C/-|frameshift_variant;REV__COL3A1|p.N1405Sfs*4|1|0.06|ENSG00000168542|chr2:189010849-189010850|-/GTTCAGG|frameshift_variant;REV__ENSG00000168542|ENST00000304636|COL3A1;REV__ENST00000470167.1_1_2:189839215-189849763:+|nuORF;REV__nc|ENSG00000168542|P02461-2|COL3A1	67.49366992349736	0.29779660154124327	2				NaN	NaN	0	NaN	8086	3670	11753
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11759	32.115	NaN	2485.1	30	0	202.11	0.106	+			18212	INADIRGI	8	52	436.25352475931624	870.4924965854325	2	436.2533264160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_INADIRGI_	DZIP1|p.E777Kfs*6|2|0.22|ENSG00000134874|chr13:95586027-95586027|T/-|frameshift_variant;DZIP1|p.K806Nfs*22|1|0.34|ENSG00000134874|chr13:95584842-95584842|T/-|frameshift_variant;ENSG00000134874|ENST00000376829|DZIP1;nc|ENSG00000134874|Q86YF9-2|DZIP1	39.252832667884924	0.6609488554722044	2				NaN	NaN	0	NaN	8087	3670	11753
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11760	32.117	NaN	2856.3	30	0	279.97	0.032				-1	 	0	58	384.7720738368809	767.5295947405618	2	384.7721252441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8088	3670	11753
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11773	32.144	NaN	32222	30	0	1732.4	0.214	+			45621	TYQEVAQKF	9	99	557.2823821215607	1112.5502113099212	2	557.2825317382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TYQEVAQKF_	ENSG00000093072|ENST00000399837|ADA2;nc|ENSG00000093072|Q9NZK5-2|ADA2	139.38205640894643	0.01076996779551382	2				NaN	NaN	0	NaN	8098	3673	11772
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11774	32.148	NaN	11618	30	0	1040.9	0.106	+			10648	EYQIKTNQL	9	78	568.8012938121126	1135.588034691025	2	568.80126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EYQIKTNQL_	ENSG00000148444|ENST00000376836|COMMD3;ENST00000463409.6_1_10:22605382-22615407:+|nuORF;ENST00000496071.5_1_10:22607528-22608924:+|nuORF;ENST00000602395.1_1_10:22607528-22615407:+|nuORF;ENST00000602574.5_1_10:22607528-22607842:+|nuORF	218.73020215598876	1.841076400425484E-08	2				NaN	NaN	0	NaN	8099	3673	11772
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11775	32.15	NaN	8718.2	30	0	922.77	0.106	+			19562	KCPLPGTAKE	10	81	522.2819815331206	1042.5494101330412	2	522.7825927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KCPLPGTAKE_	nc|ENSG00000049323|Q14766-3|LTBP1	43.650786325866115	0.5155049133366767	2				NaN	NaN	0	NaN	8100	3673	11772
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11776	32.152	NaN	6173.1	30	0	810.43	0.106			+	13707	GPRPSACCSI	10	69	495.72992802407174	989.4453031149435	2	495.72967529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GPRPSACCSI_	REV__ENST00000264005.9_1_16:67974342-67976877:-|nuORF;REV__ENST00000573538.5_2_16:67974380-67976796:-|nuORF;REV__ENST00000573846.1_1_16:67976229-67976612:-|nuORF;REV__ENST00000575467.5_1_16:67975354-67976877:-|nuORF	31.529811441608018	0.6223461015008678	2				NaN	NaN	0	NaN	8101	3673	11772
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11777	32.154	NaN	7446.7	30	0	753.82	0.106	+			50638	YEDATKITV	9	77	520.2691129568574	1038.5236729805147	2	520.269287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YEDATKITV_	ENSG00000132383|ENST00000254719|RPA1	96.0336014099291	0.047854655524928534	2				NaN	NaN	0	NaN	8102	3673	11772
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11778	32.155	NaN	8576.1	30	0	966.24	0.106				-1	 	0	75	631.3423620713693	1260.6701712095385	2	631.3428955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8103	3673	11772
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11779	32.157	NaN	4394.7	30	0	441.2	0.034	+			40831	SVEKLAAKL	9	74	479.7998885669714	957.5852242007428	2	479.79986572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVEKLAAKL_	ENSG00000261150|ENST00000615648|EPPK1;EPPK1|p.G2015Vfs*36|2|0.33|ENSG00000261150|chr8:143867210-143867210|C/-|frameshift_variant;EPPK1|p.Q829Rfs*8|1|0.05|ENSG00000261150|chr8:143870770-143870770|C/-|frameshift_variant;EPPK1|p.Y695Ifs*68|1|0.36|ENSG00000261150|chr8:143871171-143871172|-/T|frameshift_variant	60.11826168202944	0.21262886028301267	2				NaN	NaN	0	NaN	8104	3673	11772
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11794	32.189	NaN	26110	30	0	1890.3	0.214	+			13136	GGMSIFLKK	9	96	490.7835208098847	979.5524886865694	2	490.78326416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GGMSIFLKK_	ENST00000264995.7_1_3:131220431-131221595:-|nuORF	110.11987700582712	0.028875675806141952	2				NaN	NaN	0	NaN	8116	3676	11793
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11795	32.192	NaN	8652	30	0	1411.5	0.106	+			12973	GETKMVETAL	10	70	539.7761242763104	1077.5376956194207	2	539.7764282226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GETKMVETAL_	ENSG00000132465|ENST00000254801|JCHAIN	68.84614121027924	0.2867470276772903	2				NaN	NaN	0	NaN	8117	3676	11793
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11796	32.194	NaN	10544	30	0	2032.3	0.106	+			14093	GSLGFTVTK	9	66	455.25570658094284	908.4968602286857	2	455.2555236816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GSLGFTVTK_	ENSG00000163629|ENST00000411767|PTPN13;nc|ENSG00000163629|Q12923-2|PTPN13;nc|ENSG00000163629|Q12923-3|PTPN13;nc|ENSG00000163629|Q12923-4|PTPN13;PTPN13|p.T2330Qfs*13|1|0.12|ENSG00000163629|chr4:86807799-86807799|A/-|frameshift_variant	126.24258497203832	0.01742065577488747	2				NaN	NaN	0	NaN	8118	3676	11793
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11797	32.196	NaN	7005.1	30	0	801.25	0.106	+			23207	KYFDNSQSL	9	74	551.2641957493876	1100.513838565575	2	551.2645263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KYFDNSQSL_	nc|ENSG00000052841|Q96AE7-2|TTC17	96.0336014099291	0.047854655524928534	2				NaN	NaN	0	NaN	8119	3676	11793
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11798	32.198	NaN	7278.1	30	0	1869.5	0.106			+	-1	VAFSVMKMGFR	11	69	652.8277372890071	1303.6409216448142	2	652.82763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Oxidation (M)	_VAFSVM(Oxidation (M))KM(Oxidation (M))GFR_	REV__ENST00000373504.10_1_X:72900888-72901020:+|nuORF	29.170058357718403	0.683821074385409	2				NaN	NaN	0	NaN	8120	3676	11793
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11799	32.2	NaN	9699.9	30	0	712.22	0.039	+			38230	SQLEQENNLLK	11	86	658.3464193761689	1314.6782858191377	2	658.3461303710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SQLEQENNLLK_	ENSG00000102804|ENST00000458659|TSC22D1;ENST00000496314.1_1_13:45008764-45009186:-|nuORF;nc|ENSG00000102804|Q15714-2|TSC22D1;nc|ENSG00000102804|Q15714-3|TSC22D1;nc|ENSG00000102804|Q15714-5|TSC22D1	187.15520657039602	3.4317129044436567E-06	2				NaN	NaN	0	NaN	8121	3676	11793
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11800	32.2	NaN	5005.1	30	0	533.61	0.143			+	-1	LRLSCGKRR	9	71	573.3379361257035	1144.661319318207	2	573.3375854492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_LRLSC(Carbamidomethyl (C))GKRR_	REV__ENST00000396465.5_1_8:74206146-74206593:-|nuORF	31.529811441608018	0.5085848003137583	2				NaN	NaN	0	NaN	8122	3676	11793
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11811	32.228	NaN	19438	30	0	3382.6	0.214	+			5903	AVLDFVKQK	9	90	524.3138446810555	1046.6131364289108	2	524.3136596679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVLDFVKQK_	ENSG00000186001|ENST00000425562|LRCH3;nc|ENSG00000186001|Q96II8-2|LRCH3;nc|ENSG00000186001|Q96II8-3|LRCH3;nc|ENSG00000186001|Q96II8-4|LRCH3	118.74307786436346	0.02196067127630568	2				NaN	NaN	0	NaN	8130	3679	11810
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11812	32.232	NaN	33091	30	0	19141	0.106	+			13453	GLILNPPPQV	10	87	349.87786179399006	1046.6117559821703	3	349.8780212402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GLILNPPPQV_	ENSG00000215262|ENST00000399881|KCNU1	37.15910966729921	0.575322462179216	2				NaN	NaN	0	NaN	8131	3679	11810
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11813	32.234	NaN	6646.8	30	0	2432	0.106	+			8746	EEFQFIKKA	9	87	570.3087840024576	1138.6030150717152	2	570.3085327148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EEFQFIKKA_	ENSG00000140259|ENST00000267812|MFAP1	80.45461616416974	0.09558281504443908	2				NaN	NaN	0	NaN	8132	3679	11810
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11814	32.235	NaN	3960.9	30	0	431.69	0.106	+			47726	VSGEILLH	8	66	434.2503026303222	866.4860523274444	2	434.2503967285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSGEILLH_	ENSG00000147041|ENST00000297875|SYTL5;nc|ENSG00000147041|Q8TDW5-2|SYTL5;SYTL5|p.V427Cfs*12|1|0.3|ENSG00000147041|chrX:38106710-38106711|-/T|frameshift_variant	60.29395666154354	0.49887135096048313	2				NaN	NaN	0	NaN	8133	3679	11810
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11815	32.237	NaN	4812.1	30	0	367.22	0.106			+	19532	KAVVRGDFIS	10	70	546.313646647527	1090.6127403618539	2	546.3141479492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KAVVRGDFIS_	REV__ENSG00000143183|ENST00000367881|TMCO1;REV__nc|ENSG00000143183|Q9UM00-2|TMCO1;REV__nc|ENSG00000143183|Q9UM00|TMCO1	90.36981228632155	0.12895663264417576	2				NaN	NaN	0	NaN	8134	3679	11810
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11816	32.239	NaN	5174.3	30	0	389.47	0.106			+	21466	KNGLWESL	8	77	473.7532278724087	NaN	0	473.753173828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KNGLWESL_	REV__ENSG00000007216|ENST00000314669|SLC13A2;REV__nc|ENSG00000007216|Q13183-2|SLC13A2;REV__nc|ENSG00000007216|Q13183-3|SLC13A2	47.91560031466742	1.7418937515398478	2				NaN	NaN	0	NaN	8135	3679	11810
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11817	32.241	NaN	3490.1	30	0	1277.7	0.034				-1	NVMAAADLI	9	57	467.23845587002273	932.4623588068455	2	467.2388610839844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_NVM(Oxidation (M))AAADLI_	tr|U7T391|U7T391_FUSNUUDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)pyrophosphoryl-undecaprenolN-acetylglucosaminetransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=murGPE=3SV=1	37.15910966729921	0.4535818937225704	2				NaN	NaN	0	NaN	8136	3679	11810
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11830	32.268	NaN	27083	30	0	3926.9	0.214			+	32415	QVFTLAAK	8	75	439.26091353221693	876.5072741312339	2	439.2607727050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QVFTLAAK_	REV__ENSG00000155158|ENST00000512701|TTC39B;REV__ENST00000505732.5_1_9:15186859-15307321:-|nuORF;REV__nc|ENSG00000155158|Q5VTQ0-2|TTC39B;REV__nc|ENSG00000155158|Q5VTQ0-3|TTC39B;REV__nc|ENSG00000155158|Q5VTQ0-4|TTC39B;REV__nc|ENSG00000155158|Q5VTQ0-5|TTC39B;REV__nc|ENSG00000155158|Q5VTQ0-6|TTC39B;REV__nc|ENSG00000155158|Q5VTQ0|TTC39B	71.29570347882199	0.39610197767395533	2				NaN	NaN	0	NaN	8146	3682	11829
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11831	32.272	NaN	6735.4	30	0	1340.4	0.106				-1	 	0	69	336.53411418053076	1006.5805131417924	3	336.5343017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8147	3682	11829
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11832	32.274	NaN	7441.5	30	0	711.2	0.106	+			16860	HPFSPPILG	9	75	482.7662382760919	963.5179236189838	2	482.7667541503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HPFSPPILG_	ENST00000425394.6_1_12:56727327-56727459:-|nuORF	50.0245360154114	0.3026755932229825	2				NaN	NaN	0	NaN	8148	3682	11829
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11833	32.275	NaN	5376.4	30	0	637.03	0.106			+	30538	QAKKVIAQL	9	67	499.821379161298	997.628205389396	2	499.8214416503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QAKKVIAQL_	REV__ENSG00000140386|ENST00000563290|SCAPER;REV__ENST00000303521.10_1_15:76673691-77134263:-|nuORF;REV__nc|ENSG00000140386|Q9BY12-3|SCAPER;REV__RCN2-SCAPER|1|fusion;REV__SCAPER|p.E946Rfs*19|1|0.15|ENSG00000140386|chr15:76574160-76574161|-/T|frameshift_variant;REV__SCAPER|p.K784Nfs*2|1|0.32|ENSG00000140386|chr15:76702901-76702901|G/-|frameshift_variant	35.61828744233558	0.47037581924408073	2				NaN	NaN	0	NaN	8149	3682	11829
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11834	32.277	NaN	6260.2	30	0	581.02	0.106	+			25379	LPHQPLATY	9	67	520.2824141116495	1038.5502752900989	2	520.2825927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LPHQPLATY_	ENSG00000110777|ENST00000393067|POU2AF1	82.7504851949679	0.08565546331141553	2				NaN	NaN	0	NaN	8150	3682	11829
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11835	32.279	NaN	4529.4	30	0	631.12	0.106	+			48952	VVFGKEISGE	10	67	532.7854588517447	1063.5563647702893	2	532.7854614257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VVFGKEISGE_	ENST00000329073.8_1_12:132627816-132627993:-|nuORF	52.936696900407355	0.4300801048568001	2				NaN	NaN	0	NaN	8151	3682	11829
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11836	32.281	NaN	2477.3	30	0	228.56	0.033			+	-1	SQSRCCGP	8	61	447.6824307031038	893.3503084730077	2	447.6827087402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_SQSRC(Carbamidomethyl (C))CGP_	REV__ENSG00000232070|ENST00000556585|TMEM253	31.954861631926434	0.7126016770032289	2				NaN	NaN	0	NaN	8152	3682	11829
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11849	32.308	NaN	8126.4	30	0	2192.1	0.214	+			15146	GTSELLLAK	9	60	466.2768417252834	930.5391305173669	2	466.2763366699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTSELLLAK_	ASAP1|p.P792Lfs*20|1|0.1|ENSG00000153317|chr8:130112120-130112120|G/-|frameshift_variant;ASAP2|p.H548Qfs*57|1|0.14|ENSG00000151693|chr2:9374842-9374842|C/-|frameshift_variant;ASAP2|p.L787Afs*16|1|0.31|ENSG00000151693|chr2:9388513-9388514|-/C|frameshift_variant;ENSG00000151693|ENST00000281419|ASAP2;ENSG00000153317|ENST00000518721|ASAP1;nc|ENSG00000151693|O43150-2|ASAP2;nc|ENSG00000153317|Q9ULH1-2|ASAP1	77.31757898189308	0.1091473830098891	2				NaN	NaN	0	NaN	8162	3685	11848
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11850	32.312	NaN	6387.4	30	0	2037.9	0.106	+			45768	VAGAAARSHGQ	11	68	512.7669140614046	1023.5192751896092	2	512.7664184570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VAGAAARSHGQ_	ENST00000390645.2_1_2:235405210-235405255:-|nuORF	35.15202426646627	0.6210751305041943	2				NaN	NaN	0	NaN	8163	3685	11848
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11851	32.314	NaN	10349	30	0	1370.6	0.106	+			14954	GTMNLGGSLTR	11	67	553.7847798727405	1105.555006812281	2	553.7849731445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTMNLGGSLTR_	ENSG00000077549|ENST00000264202|CAPZB;nc|ENSG00000077549|P47756-1|CAPZB	163.83861116171747	4.463896168574634E-05	2				NaN	NaN	0	NaN	8164	3685	11848
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11852	32.316	NaN	5432	30	0	3136.6	0.106			+	316	AAPRSLPIP	9	69	461.2803766311335	920.546200329067	2	461.2795715332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AAPRSLPIP_	REV__ENSG00000148343|ENST00000684074|MIGA2;REV__ENST00000474639.5_1_9:131822782-131825881:+|nuORF;REV__ENST00000494608.1_1_9:131822839-131825881:+|nuORF;REV__nc|ENSG00000148343|Q7L4E1-3|MIGA2	27.882242232435846	0.5426732730940306	2				NaN	NaN	0	NaN	8165	3685	11848
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11853	32.317	NaN	3219	30	0	916.09	0.106				-1	 	0	58	446.27502024845523	445.26774378185524	1	446.2747497558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8166	3685	11848
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11854	32.319	NaN	3717.6	30	0	514.23	0.106			+	43890	TNEKLLKVI	9	73	529.3345302160307	1056.6545074988612	2	529.3345947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TNEKLLKVI_	REV__ENSG00000170807|ENST00000458573|LMOD2;REV__LMOD2|p.K405Qfs*119|1|0.49|ENSG00000170807|chr7:123662794-123662795|-/C|frameshift_variant;REV__LMOD2|p.P401Ifs*14|1|0.04|ENSG00000170807|chr7:123662786-123662787|-/ATATTTCTTGT|frameshift_variant	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	8167	3685	11848
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11855	32.321	NaN	3450.5	30	0	432.99	0.034	+			15842	GWLTKVNE	8	69	473.7532278724087	NaN	0	473.7530212402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GWLTKVNE_	ENST00000530578.1_1_11:122665536-122667965:+|nuORF	47.91560031466742	1.7418937515398478	2				NaN	NaN	0	NaN	8168	3685	11848
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11866	32.346	NaN	7306.1	30	0	2009	0.214			+	-1	PVGCMFKQQI	10	76	389.5279691151093	1165.5620779455278	3	389.52801513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_PVGCM(Oxidation (M))FKQQI_	REV__ENST00000372086.3_1_1:45923487-45956596:-|nuORF	36.446750945000026	0.5818864909973037	2				NaN	NaN	0	NaN	8176	3688	11865
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11867	32.35	NaN	6325.1	30	0	549.35	0.106	+			35651	SCSERPLTL	9	67	503.2543255067422	1004.4940980802844	2	503.2535095214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SCSERPLTL_	ENSG00000145819|ENST00000645722|ARHGAP26;ENST00000489924.1_1_5:142513552-142526947:+|nuORF;nc|ENSG00000145819|Q9UNA1|ARHGAP26	56.72105179125745	0.24094814563026265	2				NaN	NaN	0	NaN	8177	3688	11865
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11868	32.352	NaN	2494.2	30	0	324.76	0.106	+			35572	SAYFAEKLYK	10	68	610.3219947628046	1218.629436592409	2	610.3214721679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAYFAEKLYK_	ENSG00000196975|ENST00000394295|ANXA4;ENST00000471395.1_1_2:70045687-70052644:+|nuORF;ENST00000477632.5_1_2:70037634-70052644:+|nuORF;nc|ENSG00000196975|P09525-2|ANXA4;nc|ENSG00000196975|P09525|ANXA4	86.18897241530135	0.15289278403033058	2				NaN	NaN	0	NaN	8178	3688	11865
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11869	32.354	NaN	2166.2	30	0	248.37	0.106			+	24948	LLADSIRA	8	50	429.7559836077873	857.4974142823746	2	429.7554931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LLADSIRA_	REV__ENSG00000203485|ENST00000392634|INF2;REV__INF2|p.G1056Afs*31|1|0.29|ENSG00000203485|chr14:104714323-104714323|C/-|frameshift_variant;REV__INF2|p.G1212Dfs*19|1|0.9|ENSG00000203485|chr14:104714794-104714810|GGGGCCGGGCCTCAAAG/-|frameshift_variant;REV__INF2|p.P438Lfs*120|1|1.0|ENSG00000203485|chr14:104707576-104707576|C/-|frameshift_variant;REV__INF2|p.P472Qfs*86|1|0.43|ENSG00000203485|chr14:104707676-104707676|C/-|frameshift_variant;REV__INF2|p.V530Wfs*28|3|0.32|ENSG00000203485|chr14:104707848-104707848|C/-|frameshift_variant;REV__nc|ENSG00000203485|Q27J81-2|INF2;REV__nc|ENSG00000203485|Q27J81-3|INF2	63.30626980617807	0.4690498839812213	2				NaN	NaN	0	NaN	8179	3688	11865
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11870	32.355	NaN	3490.3	30	0	667.57	0.106	+			1560	AGGGGLLV	8	61	322.19353604692594	NaN	0	322.1935119628906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AGGGGLLV_	ENSG00000149489|ENST00000278833|ROM1	33.49298260027079	1.7418937515398478	2				NaN	NaN	0	NaN	8180	3688	11865
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11871	32.357	NaN	4297	30	0	330.15	0.106	+			27618	MPPRFIMP	8	72	494.7577307094442	987.5009084856885	2	494.7598876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MPPRFIMP_	nc|ENSG00000155657|Q8WZ42-6|TTN	62.97842346883844	0.4722955155785405	2				NaN	NaN	0	NaN	8181	3688	11865
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11872	32.359	NaN	3194.3	30	0	236.28	0.036	+			37069	SISDKFFQK	9	73	550.2925511493439	1098.5705493654878	2	550.2928466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SISDKFFQK_	ENSG00000089472|ENST00000343002|HEPH;HEPH|p.R1086Qfs*4|1|0.29|ENSG00000089472|chrX:66266444-66266445|-/C|frameshift_variant;nc|ENSG00000089472|Q9BQS7-2|HEPH;nc|ENSG00000089472|Q9BQS7-3|HEPH;nc|ENSG00000089472|Q9BQS7-4|HEPH	75.04331003522576	0.118981335847003	2				NaN	NaN	0	NaN	8182	3688	11865
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11885	32.387	NaN	9014.2	30	0	1362.6	0.214				-1	MANKALMRSE	10	76	583.788623965997	1165.5626949987939	2	583.7891235351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_MANKALM(Oxidation (M))RSE_	NF2|p.E372K|1|0.47|ENSG00000186575|chr22:29671940-29671940|G/A|missense_variant	40.77816245573522	0.5419747034533848	2				NaN	NaN	0	NaN	8192	3691	11884
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11886	32.391	NaN	10162	30	0	1042.5	0.106			+	7981	DSVLNLIKG	9	77	479.7816745710936	957.5487962089873	2	479.7820739746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DSVLNLIKG_	REV__CON__Q9TRI1;REV__ENSG00000151655|ENST00000358415|ITIH2	35.61828744233558	0.47037581924408073	2				NaN	NaN	0	NaN	8193	3691	11884
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11887	32.393	NaN	6594.4	30	0	1043.7	0.106	+			48160	VSYTRSVTL	9	71	513.2851653012129	1024.5557776692258	2	513.2855224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSYTRSVTL_	ENSG00000275395|ENST00000616721|FCGBP;ENSG00000275395|ENST00000616721|FCGBP;FCGBP-ACSS2|1|fusion;FCGBP-ACSS2|1|fusion;nc|ENSG00000275395|Q9Y6R7|FCGBP;nc|ENSG00000275395|Q9Y6R7|FCGBP;nc|ENSG00000275395|Q9Y6R7|FCGBP	58.22992032128504	0.22837015374068087	2				NaN	NaN	0	NaN	8194	3691	11884
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11888	32.394	NaN	4314.5	30	0	257.97	0.106	+			45002	TVEFLAVPI	9	79	494.7876628877389	987.5607728422779	2	494.7872009277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TVEFLAVPI_	ENST00000372264.3_1_9:134183814-134184315:+|nuORF	65.80317337860623	0.1652391959156183	2				NaN	NaN	0	NaN	8195	3691	11884
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11889	32.396	NaN	6831.6	30	0	748.11	0.106	+			20118	KEKLCYVAL	9	78	562.3125860526133	1122.6106191720264	2	562.313232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_KEKLC(Carbamidomethyl (C))YVAL_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196604|ENST00000409914|POTEF;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000418987.2_1_9:103493819-103494230:+|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;nc|ENSG00000204434|Q9BYX7|POTEKP	70.8162118820467	0.13725933411854815	2				NaN	NaN	0	NaN	8196	3691	11884
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11890	32.398	NaN	1961.5	30	0	166.34	0.106			+	-1	CSFKGTTPDY	10	61	588.2550825779755	NaN	0	588.255615234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_C(Carbamidomethyl (C))SFKGTTPDY_	REV__ENSG00000144119|ENST00000272520|C1QL2	45.97224482568171	0.33106653400957564	2				NaN	NaN	0	NaN	8197	3691	11884
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11891	32.4	NaN	3354.7	30	0	424.24	0.038			+	-1	VTVYCVWCSA	10	80	594.2635904382805	1186.512627943361	2	594.2631225585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_VTVYCVWC(Carbamidomethyl (C))SA_	REV__ENST00000265052.9_1_3:127407937-127408063:-|nuORF	42.396135135203025	0.5270658956260207	2				NaN	NaN	0	NaN	8198	3691	11884
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11906	32.431	NaN	9214.1	30	0	595.59	0.215	+			25662	LRAVCLCGI	9	76	502.77357521692693	NaN	0	502.7732238769531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_LRAVC(Carbamidomethyl (C))LCGI_	ENST00000368190.7_1_1:157493863-157494031:-|nuORF	55.50420428727701	0.16876052142120426	2				NaN	NaN	0	NaN	8210	3694	11905
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11907	32.435	NaN	6647.5	30	0	699.42	0.106	+			20194	KELEFLKK	8	81	517.8159501172765	1033.617347301353	2	517.8160400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KELEFLKK_	ENSG00000112739|ENST00000337659|PRPF4B;ENST00000463634.6_1_6:4041126-4056780:+|nuORF;PRPF4B|p.K780Nfs*13|4|0.31|ENSG00000112739|chr6:4052741-4052741|A/-|frameshift_variant;PRPF4B|p.Y781Ifs*3|2|0.35|ENSG00000112739|chr6:4052740-4052741|-/A|frameshift_variant	85.86182877749512	0.2899975309073281	2				NaN	NaN	0	NaN	8211	3694	11905
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11908	32.437	NaN	3830.5	30	0	328.05	0.106			+	49755	VYPKGKESL	9	70	510.7896682735459	1019.5647836138918	2	510.78955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYPKGKESL_	REV__ENSG00000117153|ENST00000367261|KLHL12;REV__nc|ENSG00000117153|Q53G59-2|KLHL12	51.19269402634007	0.2889735674168909	2				NaN	NaN	0	NaN	8212	3694	11905
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11909	32.438	NaN	8215.3	30	0	1974.2	0.106	+			3960	ATATLIIEH	9	66	484.7741029309564	967.5336529287129	2	484.7740478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATATLIIEH_	ENSG00000100522|ENST00000216410|GNPNAT1;ENST00000553987.1_1_14:53248483-53250189:-|nuORF	166.78253343968296	0.0033161236045811926	2				NaN	NaN	0	NaN	8213	3694	11905
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11910	32.44	NaN	4431.1	30	0	387.95	0.106	+			40452	STVQGSNIFER	11	71	619.312218965264	1236.609884997328	2	619.3123779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STVQGSNIFER_	ENSG00000124145|ENST00000372733|SDC4;nc|ENSG00000124145|P31431-2|SDC4	102.95473732560676	0.05457861179418332	2				NaN	NaN	0	NaN	8214	3694	11905
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11911	32.442	NaN	9079.8	30	0	970.12	0.106	+			20348	KESAEFQTQL	10	74	590.7958252627357	1179.5770975922712	2	590.796142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KESAEFQTQL_	ENSG00000047410|ENST00000367478|TPR;TPR|p.E1141Dfs*29|1|0.08|ENSG00000047410|chr1:186344085-186344086|-/CAGGTAAA|frameshift_variant;TPR|p.P2083Qfs*3|1|0.31|ENSG00000047410|chr1:186323735-186323735|G/-|frameshift_variant;TPR|p.T2133Lfs*63|1|0.03|ENSG00000047410|chr1:186322382-186322383|-/GTACTAATAAG|frameshift_variant;TPR|p.V1142Efs*26|1|0.08|ENSG00000047410|chr1:186344083-186344084|-/TT|frameshift_variant	123.11161354013207	0.02293503976405718	2				NaN	NaN	0	NaN	8215	3694	11905
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11912	32.444	NaN	3092	30	0	271.27	0.035	+			51174	YPGIGKNPF	9	68	496.76566851605634	991.5167840989127	2	496.76519775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YPGIGKNPF_	ENST00000313349.3_1_2:64862767-64862863:-|nuORF	35.200714571348534	0.47427825964483533	2				NaN	NaN	0	NaN	8216	3694	11905
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11923	32.469	NaN	19288	30	0	1323.8	0.214	+			49675	VYKCLSENI	9	92	563.2841389663555	1124.553724999511	2	563.2844848632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_VYKC(Carbamidomethyl (C))LSENI_	ENSG00000082898|ENST00000401558|XPO1;ENST00000428210.5_1_2:61705957-61719950:-|nuORF;ENST00000461407.5_1_2:61712881-61715780:-|nuORF	129.42129120953632	0.01549634589885217	2				NaN	NaN	0	NaN	8224	3697	11922
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11924	32.472	NaN	11325	30	0	3624.4	0.106	+			14189	GSSAINILK	9	68	451.7690688786578	901.5235848241156	2	451.7687072753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSSAINILK_	ENSG00000167522|ENST00000301030|ANKRD11;ENST00000330736.9_1_16:89334888-89371640:-|nuORF	82.7504851949679	0.08565546331141553	2				NaN	NaN	0	NaN	8225	3697	11922
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11925	32.475	NaN	11671	30	0	952.82	0.106	+			43188	TETVLRQAI	9	85	515.7983376442866	1029.582122355373	2	515.79833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TETVLRQAI_	EEF2|p.E241Rfs*13|1|0.26|ENSG00000167658|chr19:3982316-3982316|C/-|frameshift_variant;ENSG00000167658|ENST00000309311|EEF2	56.43379154798735	0.2433427591689151	2				NaN	NaN	0	NaN	8226	3697	11922
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11926	32.476	NaN	4314.5	30	0	436.4	0.106	+			15632	GVLGGYIQK	9	57	467.771549685482	933.528546437764	2	467.7713623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GVLGGYIQK_	ENSG00000139687|ENST00000267163|RB1;ENST00000525036.1_1_13:48877982-48934322:+|nuORF;RB1|p.L561Mfs*9|1|0.07|ENSG00000139687|chr13:48381428-48381432|CCTTG/-|frameshift_variant;RB1|p.V654Cfs*4|1|0.33|ENSG00000139687|chr13:48456343-48456343|A/-|frameshift_variant;RB1|p.Y529*|1|0.23|ENSG00000139687|chr13:48381334-48381335|AC/-|frameshift_variant;RB1|p.Y529Tfs*3|1|0.08|ENSG00000139687|chr13:48381329-48381329|T/-|frameshift_variant	85.35947970620816	0.07794846947388434	2				NaN	NaN	0	NaN	8227	3697	11922
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11927	32.478	NaN	7474	30	0	777.29	0.106	+			26074	LSLSSLAGAPT	11	76	508.7846077061335	1015.554662479067	2	509.28240966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSLSSLAGAPT_	ENST00000589935.1_1_18:54318575-54318788:+|nuORF	44.377184641726394	0.49804979881800077	2				NaN	NaN	0	NaN	8228	3697	11922
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11928	32.48	NaN	3702.1	30	0	353.27	0.106	+			46944	VIYSTPLPEK	10	70	573.8240936475644	1145.6336343619287	2	573.8242797851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VIYSTPLPEK_	ENSG00000109787|ENST00000261438|KLF3;KLF3|p.K106Nfs*21|2|0.36|ENSG00000109787|chr4:38688839-38688839|A/-|frameshift_variant;KLF3|p.P226Rfs*52|3|0.26|ENSG00000109787|chr4:38689855-38689855|C/-|frameshift_variant;KLF3|p.Q227Afs*37|1|0.46|ENSG00000109787|chr4:38689854-38689855|-/C|frameshift_variant;KLF3|p.Y107Ifs*72|1|0.36|ENSG00000109787|chr4:38688838-38688839|-/A|frameshift_variant;nc|ENSG00000109787|P57682-2|KLF3	93.1432384553994	0.11307820852620741	2				NaN	NaN	0	NaN	8229	3697	11922
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11929	32.482	NaN	3039.5	30	0	330.64	0.035	+			37204	SKEPQLKGI	9	56	500.2949890335888	998.5754251339777	2	500.29510498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SKEPQLKGI_	ENSG00000114279|ENST00000445105|FGF12;nc|ENSG00000129682|Q92913-4|FGF13	40.77816245573522	0.41113185337114944	2				NaN	NaN	0	NaN	8230	3697	11922
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11940	32.508	NaN	17498	30	0	3194	0.214	+			19001	IVVEHIIMK	9	84	541.3255931991521	1080.636633465104	2	541.3259887695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IVVEHIIMK_	ENSG00000109133|ENST00000504986|TMEM33;TMEM33|p.L211P|1|0.2|ENSG00000109133|chr4:41954087-41954087|T/C|missense_variant	123.20810148215591	0.019257656778428764	2				NaN	NaN	0	NaN	8238	3700	11939
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11941	32.511	NaN	8911.9	30	0	1154.2	0.106	+			17746	IEQEQKLAL	9	72	536.3061417693359	1070.5977306054717	2	536.30615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IEQEQKLAL_	ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2	126.24258497203832	0.01742065577488747	2				NaN	NaN	0	NaN	8239	3700	11939
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11942	32.513	NaN	6629.7	30	0	986.77	0.106	+			2558	AQATISFPK	9	75	481.768259472037	961.521966010874	2	481.76861572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AQATISFPK_	CDC6|p.P86Lfs*17|1|0.14|ENSG00000094804|chr17:40291132-40291132|C/-|frameshift_variant;ENSG00000094804|ENST00000209728|CDC6	67.49366992349736	0.1516260258713357	2				NaN	NaN	0	NaN	8240	3700	11939
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11943	32.515	NaN	6299.9	30	0	611.38	0.106			+	9935	EQVVPKMNV	9	80	522.2819815331206	1042.5494101330412	2	522.782470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EQVVPKMNV_	REV__ENSG00000115364|ENST00000393909|MRPL19	32.81241826257853	0.4965981579233955	2				NaN	NaN	0	NaN	8241	3700	11939
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11944	32.517	NaN	6709.3	30	0	627.1	0.106			+	44299	TSAVTTRRN	9	73	503.27704488059663	1004.5395368279933	2	503.2774658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TSAVTTRRN_	REV__nc|ENSG00000180071|Q8IVF6-2|ANKRD18A	60.11826168202944	0.21262886028301267	2				NaN	NaN	0	NaN	8242	3700	11939
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11945	32.519	NaN	4215.4	30	0	458.66	0.106	+			1231	AERDVYTGDAL	11	77	605.2911381066436	1208.5677232800872	2	605.291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AERDVYTGDAL_	ENSG00000008018|ENST00000262193|PSMB1	55.08391021199286	0.3673379875553588	2				NaN	NaN	0	NaN	8243	3700	11939
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11946	32.52	NaN	7664.2	30	0	2129	0.037	+			19002	IVVEHIIMK	9	70	361.2192120092241	1080.6358066278724	3	361.5538330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IVVEHIIMK_	ENSG00000109133|ENST00000504986|TMEM33;TMEM33|p.L211P|1|0.2|ENSG00000109133|chr4:41954087-41954087|T/C|missense_variant	44.377184641726394	0.36891676396732553	2				NaN	NaN	0	NaN	8244	3700	11939
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11959	32.548	NaN	9229.7	30	0	830.32	0.214	+			5287	ATVIFVASQK	10	75	532.3112322426041	1062.607911552008	2	532.3110961914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATVIFVASQK_	ENSG00000143493|ENST00000366994|INTS7;INTS7|p.F796Sfs*34|1|0.34|ENSG00000143493|chr1:211946635-211946635|A/-|frameshift_variant;nc|ENSG00000143493|Q9NVH2-2|INTS7;nc|ENSG00000143493|Q9NVH2-3|INTS7;nc|ENSG00000143493|Q9NVH2-4|INTS7	134.7655990226056	0.012149689860786373	2				NaN	NaN	0	NaN	8254	3703	11958
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11960	32.552	NaN	9520.4	30	0	1397.5	0.106	+			2814	ASAAAALVLK	10	77	457.7868001257679	913.5590473183358	2	457.78656005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASAAAALVLK_	ENSG00000137076|ENST00000314888|TLN1;nc|ENSG00000137076|Q9Y490-2|TLN1;TLN1|p.P1628Rfs*20|1|0.44|ENSG00000137076|chr9:35707144-35707144|G/-|frameshift_variant	126.24258497203832	0.01851300475414303	2				NaN	NaN	0	NaN	8255	3703	11958
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11961	32.554	NaN	11924	30	0	5287	0.106			+	17734	IEPEAIIPKS	10	62	366.21349931293594	1095.6186685390078	3	366.2132873535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IEPEAIIPKS_	REV__ENSG00000100324|ENST00000216160|TAB1;REV__nc|ENSG00000100324|Q15750-2|TAB1;REV__TAB1|p.T433Pfs*9|2|0.37|ENSG00000100324|chr22:39428168-39428168|C/-|frameshift_variant	20.94693142431847	0.7087701759873708	2				NaN	NaN	0	NaN	8256	3703	11958
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11962	32.556	NaN	5701	30	0	674.25	0.106	+			40895	SVFMSQNLK	9	66	527.2731276271666	NaN	0	527.2733154296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVFMSQNLK_	ENST00000586255.5_1_19:9448675-9449241:+|nuORF	63.42647028704847	0.13470499157941143	2				NaN	NaN	0	NaN	8257	3703	11958
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11963	32.558	NaN	5581.6	30	0	516.01	0.106			+	36073	SEKAKLLLV	9	66	500.8235958882268	999.6326388432536	2	500.8233337402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SEKAKLLLV_	REV__ENSG00000186976|ENST00000262726|EFCAB6;REV__nc|ENSG00000186976|Q5THR3-2|EFCAB6;REV__nc|ENSG00000186976|Q5THR3-3|EFCAB6;REV__nc|ENSG00000186976|Q5THR3-4|EFCAB6	56.72105179125745	0.24094814563026265	2				NaN	NaN	0	NaN	8258	3703	11958
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11964	32.559	NaN	4470.6	30	0	1537.8	0.106	+			18098	IKRTPNNVVS	10	60	376.5556691408319	1126.6451780226957	3	376.55572509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IKRTPNNVVS_	ENSG00000136153|ENST00000377534|LMO7;nc|ENSG00000136153|Q8WWI1-2|LMO7;nc|ENSG00000136153|Q8WWI1-3|LMO7;nc|ENSG00000136153|Q8WWI1-4|LMO7;nc|ENSG00000136153|Q8WWI1-5|LMO7;nc|ENSG00000136153|Q8WWI1|LMO7	37.50817390946774	0.5721060100277453	2				NaN	NaN	0	NaN	8259	3703	11958
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11965	32.561	NaN	6986.3	30	0	604.81	0.035			+	30475	QAEITVSER	9	75	516.7673667168718	1031.5201805005436	2	516.766357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QAEITVSER_	REV__ENSG00000115825|ENST00000234179|PRKD3;REV__ENST00000464552.1_1_2:37520270-37543499:-|nuORF;REV__ENST00000494667.5_1_2:37496701-37543667:-|nuORF;REV__nc|ENSG00000115825|O94806-2|PRKD3	62.107414245175825	0.1960472003779324	2				NaN	NaN	0	NaN	8260	3703	11958
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11978	32.588	NaN	21626	30	0	2900.2	0.214			+	49388	VVTEAIGQVT	10	94	508.7846077061335	1015.554662479067	2	508.78497314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVTEAIGQVT_	REV__tr|U7STZ3|U7STZ3_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01040PE=4SV=1	78.26377905018397	0.20980573808910843	2				NaN	NaN	0	NaN	8270	3706	11977
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11979	32.592	NaN	35415	30	0	9082.8	0.106	+			12586	GEHGLIIRV	9	73	331.86599768231963	992.5761636471589	3	331.8662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEHGLIIRV_	ENSG00000078618|ENST00000352171|NRDC;nc|ENSG00000078618|O43847-2|NRDC	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	8271	3706	11977
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11980	32.594	NaN	27756	30	0	9635.5	0.106				-1	LVLVCTMALC	10	73	361.1868855986115	1080.5388273960345	3	361.1871337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_LVLVCTM(Oxidation (M))ALC_	ENSG00000275385|ENST00000616054|CCL18	39.252832667884924	0.5560298534376815	2				NaN	NaN	0	NaN	8272	3706	11977
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11981	32.596	NaN	4281.5	30	0	431.82	0.106	+			23514	LAHIGTCL	8	68	442.73638074892744	883.4582085646549	2	442.7366943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_LAHIGTC(Carbamidomethyl (C))L_	ENSG00000079691|ENST00000329474|CARMIL1;nc|ENSG00000079691|Q5VZK9-2|CARMIL1;nc|ENSG00000079691|Q5VZK9-3|CARMIL1	96.04771818265245	0.25916207331555047	2				NaN	NaN	0	NaN	8273	3706	11977
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11982	32.597	NaN	3285.5	30	0	594.09	0.106	+			18055	IIVGNPKAL	9	60	462.79766553709703	923.5807781409941	2	462.7973327636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IIVGNPKAL_	ENSG00000005007|ENST00000262803|UPF1;ENST00000600689.1_1_19:18974163-18976510:+|nuORF;nc|ENSG00000005007|Q92900|UPF1	65.80317337860623	0.1652391959156183	2				NaN	NaN	0	NaN	8274	3706	11977
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11983	32.599	NaN	2860.6	30	0	439.72	0.106			+	-1	VFVMVVMMVM	10	64	609.2945274841692	1216.5745020351383	2	609.2941284179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Oxidation (M)	_VFVM(Oxidation (M))VVMMVM(Oxidation (M))_	REV__ENSG00000139874|ENST00000267377|SSTR1	35.200714571348534	0.5923680232273616	2				NaN	NaN	0	NaN	8275	3706	11977
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11984	32.601	NaN	2458	30	0	249.06	0.035	+			13137	GGMSIFLKK	9	57	490.7835208098847	979.5524886865694	2	490.7835388183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GGMSIFLKK_	ENST00000264995.7_1_3:131220431-131221595:-|nuORF	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	8276	3706	11977
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	11999	32.632	NaN	40220	30	0	8412.3	0.214			+	9393	EKELEAQLA	9	78	515.7748620662773	1029.5351711993544	2	515.7744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EKELEAQLA_	REV__CNTRL|p.K1802Sfs*9|2|0.21|ENSG00000119397|chr9:121162247-121162247|A/-|frameshift_variant;REV__CNTRL|p.K957Rfs*16|1|0.17|ENSG00000119397|chr9:121142265-121142265|A/-|frameshift_variant;REV__CNTRL|p.N1300Tfs*22|1|0.32|ENSG00000119397|chr9:121150412-121150412|C/-|frameshift_variant;REV__ENSG00000119397|ENST00000373855|CNTRL;REV__ENST00000373851.6_1_9:123874787-123912836:+|nuORF;REV__nc|ENSG00000119397|Q7Z7A1-2|CNTRL;REV__nc|ENSG00000119397|Q7Z7A1-5|CNTRL	90.60085204095205	0.06317133949006545	2				NaN	NaN	0	NaN	8288	3709	11998
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12000	32.636	NaN	8617.2	30	0	1250.3	0.106			+	863	AEGVTGKGQSL	11	68	523.7793595603783	1045.5441661875566	2	523.7779541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEGVTGKGQSL_	REV__ENST00000561688.1_1_16:2294242-2294386:-|nuORF	68.84614121027924	0.24535906747804975	2				NaN	NaN	0	NaN	8289	3709	11998
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12001	32.638	NaN	6197.2	30	0	1174.9	0.106				-1	ASMKKVKSL	9	59	336.534227507259	NaN	0	336.5342712402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_ASM(Oxidation (M))KKVKSL_	ENST00000369426.9_1_1:119575536-119588262:-|nuORF	27.882242232435846	0.3367954786602879	2				NaN	NaN	0	NaN	8290	3709	11998
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12002	32.639	NaN	4803.9	30	0	520.51	0.106			+	26923	LYFSNGGLV	9	67	485.2543937916421	968.4942346500842	2	485.2540283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LYFSNGGLV_	REV__ENSG00000184916|ENST00000331782|JAG2;REV__JAG2|p.G473Afs*7|1|0.31|ENSG00000184916|chr14:105150875-105150875|C/-|frameshift_variant;REV__JAG2|p.G741Afs*21|5|0.27|ENSG00000184916|chr14:105148144-105148144|G/-|frameshift_variant;REV__nc|ENSG00000184916|Q9Y219-2|JAG2	53.351449002276354	0.2690372970092375	2				NaN	NaN	0	NaN	8291	3709	11998
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12003	32.641	NaN	5758	30	0	720.95	0.106	+			5545	AVALPLQTK	9	72	470.795134177645	939.5757154220901	2	470.7948303222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVALPLQTK_	ENSG00000171566|ENST00000499023|PLRG1;ENST00000512719.5_1_4:155467261-155471460:-|nuORF;nc|ENSG00000171566|O43660-2|PLRG1	58.78195531508484	0.22376836668196862	2				NaN	NaN	0	NaN	8292	3709	11998
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12004	32.643	NaN	4700.3	30	0	1117.1	0.036				-1	SLLRQPLPM	9	60	357.5389615179249	1069.5950551539747	3	357.5390930175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_SLLRQPLPM(Oxidation (M))_	ENSG00000185038|ENST00000389758|MROH2A;MROH2A|p.L1521Sfs*47|1|0.43|ENSG00000185038|chr2:233829730-233829730|C/-|frameshift_variant	27.882242232435846	0.5426732730940306	2				NaN	NaN	0	NaN	8293	3709	11998
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12005	32.644	NaN	3668.4	30	0	861.61	0.141	+			49118	VVLLVINHK	9	68	345.5621039243066	1033.6644823731199	3	345.5621337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VVLLVINHK_	ENSG00000112697|ENST00000230461|TMEM30A;nc|ENSG00000112697|Q9NV96-2|TMEM30A;nc|ENSG00000112697|Q9NV96-3|TMEM30A	25.450171626174864	0.5654022654467333	2				NaN	NaN	0	NaN	8294	3709	11998
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12018	32.673	NaN	141060	30	0	20503	0.149	+			34855	RYSSMAASF	9	81	510.2344083192549	1018.4542637053098	2	510.2345886230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RYSSMAASF_	ENSG00000162366|ENST00000294338|PDZK1IP1	93.1432384553994	0.056003526918089595	2				NaN	NaN	0	NaN	8304	3712	12017
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12019	32.676	NaN	12717	30	0	6138.9	0.106			+	26294	LSVAWKLP	8	70	457.2773455544132	912.5401381756265	2	457.27691650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSVAWKLP_	REV__ENST00000418257.1_1_10:91122507-91122987:+|nuORF	44.116797842482775	0.6307669463330267	2				NaN	NaN	0	NaN	8305	3712	12017
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12020	32.678	NaN	13977	30	0	1137.5	0.106			+	24986	LLEARSFS	8	81	461.7529970778453	NaN	0	461.7532653808594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LLEARSFS_	REV__ENSG00000105219|ENST00000430325|CCNP	76.7741389293348	1.7418937515398478	2				NaN	NaN	0	NaN	8306	3712	12017
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12021	32.68	NaN	10062	30	0	1542.4	0.106			+	29418	PCAESKVLSL	10	80	523.7793595603783	1045.5441661875566	2	523.7783813476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PCAESKVLSL_	REV__ENST00000448287.5_1_21:45287155-45323885:+|nuORF	69.6276240434122	0.2803623802747859	2				NaN	NaN	0	NaN	8307	3712	12017
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12022	32.682	NaN	5875.7	30	0	487.54	0.106	+			24045	LEGKLATLS	9	73	466.27726856578096	930.5399841983619	2	466.276611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LEGKLATLS_	ENSG00000196535|ENST00000527372|MYO18A;nc|ENSG00000196535|Q92614-2|MYO18A;nc|ENSG00000196535|Q92614-3|MYO18A;nc|ENSG00000196535|Q92614-4|MYO18A;nc|ENSG00000196535|Q92614-5|MYO18A	90.60085204095205	0.06317133949006545	2				NaN	NaN	0	NaN	8308	3712	12017
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12023	32.683	NaN	12006	30	0	5904.5	0.106	+			45897	VAPTLRSEL	9	72	493.2875087396196	984.5604645460393	2	493.2875061035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VAPTLRSEL_	ENSG00000134853|ENST00000257290|PDGFRA;ENST00000509092.5_1_4:55124935-55146696:+|nuORF;nc|ENSG00000134853|P16234-3|PDGFRA;PDGFRA|p.N780Tfs*17|1|0.45|ENSG00000134853|chr4:54285382-54285382|A/-|frameshift_variant	41.42661286455405	0.403525789677298	2				NaN	NaN	0	NaN	8309	3712	12017
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12024	32.685	NaN	5858.6	30	0	622.47	0.034			+	18632	ISTFRTTL	8	69	469.7695939939621	937.5246350547242	2	469.7688293457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ISTFRTTL_	REV__DYNC2H1|p.F2761Lfs*20|1|0.09|ENSG00000187240|chr11:103203742-103203742|T/-|frameshift_variant;REV__DYNC2H1|p.L4021Wfs*5|1|0.3|ENSG00000187240|chr11:103358262-103358262|T/-|frameshift_variant;REV__DYNC2H1|p.P3966Hfs*44|1|0.22|ENSG00000187240|chr11:103321194-103321194|T/-|frameshift_variant;REV__DYNC2H1|p.R2426C|1|0.25|ENSG00000187240|chr11:103188632-103188632|C/T|missense_variant;REV__ENSG00000187240|ENST00000375735|DYNC2H1;REV__nc|ENSG00000187240|Q8NCM8-2|DYNC2H1	82.30502934623384	0.30436709589983096	2				NaN	NaN	0	NaN	8310	3712	12017
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12025	32.686	NaN	13814	30	0	2763.4	0.138	+			14702	GTIGLTIAK	9	73	437.27381320835156	872.5330734835031	2	437.2738342285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_GTIGLTIAK_	ENSG00000112992|ENST00000344920|NNT	171.53180478179638	0.0025054460641941692	2				NaN	NaN	0	NaN	8311	3712	12017
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12038	32.715	NaN	6626.7	30	0	1023.2	0.214	+			40874	SVFGTMPLK	9	69	498.2651527879637	994.5157526427274	2	498.2647705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_SVFGTM(Oxidation (M))PLK_	ENSG00000151348|ENST00000533608|EXT2;nc|ENSG00000151348|Q93063-2|EXT2;nc|ENSG00000151348|Q93063-3|EXT2	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	8321	3715	12037
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12039	32.718	NaN	9602.7	30	0	845.94	0.106	+			41261	SVLIQKQIFK	10	76	602.3770986741685	1202.7396444151368	2	602.3768920898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVLIQKQIFK_	ENSG00000205339|ENST00000379719|IPO7;ENST00000528833.1_1_11:9431619-9435997:+|nuORF;IPO7|p.D430Mfs*6|1|0.18|ENSG00000205339|chr11:9425208-9425208|A/-|frameshift_variant;IPO7|p.M511Cfs*3|1|0.19|ENSG00000205339|chr11:9429134-9429134|A/-|frameshift_variant	99.78786539795823	0.07832680346773438	2				NaN	NaN	0	NaN	8322	3715	12037
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12040	32.72	NaN	8160.8	30	0	1023.7	0.106			+	44019	TPLHDECSL	9	72	507.7314985756803	1013.4484442181606	2	507.7315673828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TPLHDECSL_	REV__ENSG00000115970|ENST00000405975|THADA;REV__nc|ENSG00000115970|Q6YHU6-2|THADA;REV__nc|ENSG00000115970|Q6YHU6-3|THADA;REV__nc|ENSG00000115970|Q6YHU6-4|THADA	65.80317337860623	0.1652391959156183	2				NaN	NaN	0	NaN	8323	3715	12037
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12041	32.722	NaN	9667.8	30	0	2321.1	0.106	+			19185	IYTNLNQKI	9	77	553.8142083589403	1105.6138637846805	2	553.8140869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IYTNLNQKI_	ENSG00000144036|ENST00000272427|EXOC6B;nc|ENSG00000144036|Q9Y2D4-2|EXOC6B	171.53180478179638	0.0025054460641941692	2				NaN	NaN	0	NaN	8324	3715	12037
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12042	32.724	NaN	5502.5	30	0	924.47	0.106	+			32668	RAAYEGSVAK	10	67	526.2805471928343	1050.5465414524685	2	526.2803344726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RAAYEGSVAK_	CDAN1|p.T563Pfs*29|1|0.16|ENSG00000140326|chr15:42731673-42731673|G/-|frameshift_variant;ENSG00000140326|ENST00000356231|CDAN1;nc|ENSG00000140326|Q8IWY9-1|CDAN1	72.87924865735499	0.25379688738724415	2				NaN	NaN	0	NaN	8325	3715	12037
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12043	32.726	NaN	4402.4	30	0	579.64	0.106	+			20059	KEKEGILQL	9	76	529.3163779026245	1056.6182028720489	2	529.3161010742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KEKEGILQL_	ENSG00000012817|ENST00000317961|KDM5D;ENSG00000126012|ENST00000375401|KDM5C;ENST00000469599.6_1_Y:21868632-21871788:-|nuORF;ENST00000492117.1_1_Y:21868632-21877911:-|nuORF;KDM5C|p.L1399Wfs*5|2|0.16|ENSG00000126012|chrX:53193560-53193560|G/-|frameshift_variant;nc|ENSG00000012817|Q9BY66-2|KDM5D;nc|ENSG00000012817|Q9BY66-3|KDM5D;nc|ENSG00000126012|P41229-2|KDM5C;nc|ENSG00000126012|P41229-3|KDM5C;nc|ENSG00000126012|P41229-4|KDM5C;nc|ENSG00000126012|P41229-5|KDM5C	54.722347961057174	0.257609425301511	2				NaN	NaN	0	NaN	8326	3715	12037
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12044	32.728	NaN	5380.9	30	0	531.67	0.034			+	24393	LFWPIPGQ	8	66	479.2627407287804	956.5109285243608	2	479.26263427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LFWPIPGQ_	REV__ENSG00000156194|ENST00000286719|PPEF2;REV__nc|ENSG00000156194|O14830-2|PPEF2	31.57888975003103	0.7155046476286219	2				NaN	NaN	0	NaN	8327	3715	12037
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12055	32.753	NaN	18048	30	0	2625.1	0.214	+			36368	SETDMVRQI	9	94	539.7637073551635	1077.512861777127	2	539.7636108398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SETDMVRQI_	ENSG00000149823|ENST00000279281|VPS51	136.26810882979174	0.012230845423532208	2				NaN	NaN	0	NaN	8335	3718	12054
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12056	32.756	NaN	8232.4	30	0	1312.7	0.106	+			501	ACFEPANQMVK	11	77	619.2886018153627	1236.5626506975252	2	619.2885131835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ACFEPANQMVK_	ENSG00000075886|ENST00000321253|TUBA3D;ENSG00000123416|ENST00000336023|TUBA1B;ENSG00000127824|ENST00000248437|TUBA4A;ENSG00000152086|ENST00000312988|TUBA3E;ENSG00000167552|ENST00000301071|TUBA1A;ENSG00000167553|ENST00000301072|TUBA1C;ENSG00000198033|ENST00000400113|TUBA3C;nc|ENSG00000123416|P68363-2|TUBA1B;nc|ENSG00000127824|P68366-2|TUBA4A;nc|ENSG00000167552|Q71U36-2|TUBA1A;nc|ENSG00000198033|P0DPH7-2|TUBA3C;TUBA3C|p.T361Rfs*18|1|0.17|ENSG00000198033|chr13:19174136-19174136|G/-|frameshift_variant;TUBA3D|p.G366Efs*13|1|0.17|ENSG00000075886|chr2:131482588-131482588|G/-|frameshift_variant;TUBA3D|p.V328Pfs*54|1|0.45|ENSG00000075886|chr2:131480665-131480666|-/CCCAAAGA|frameshift_variant	88.17693792209575	0.10623774136611049	2				NaN	NaN	0	NaN	8336	3718	12054
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12057	32.758	NaN	3653.7	30	0	378.51	0.106			+	2399	ANVVKVAS	8	51	394.23732956988096	786.4601062065619	2	394.2370300292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ANVVKVAS_	REV__ENSG00000174306|ENST00000683867|ZHX3;REV__nc|ENSG00000174306|Q9H4I2-2|ZHX3	45.9519527083369	0.6193794311207887	2				NaN	NaN	0	NaN	8337	3718	12054
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12058	32.76	NaN	3545.8	30	0	459.48	0.106	+			21473	KNHPLYAL	8	59	478.2715407545674	954.5285285759348	2	478.2711486816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KNHPLYAL_	ENSG00000154767|ENST00000285021|XPC;nc|ENSG00000154767|Q01831-2|XPC	26.79610172149135	0.7524337208463756	2				NaN	NaN	0	NaN	8338	3718	12054
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12059	32.762	NaN	6861.9	30	0	1035.4	0.106			+	21022	KKISMNLPL	9	67	522.3172929461446	1042.620032959089	2	522.3161010742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KKISMNLPL_	REV__ENSG00000121446|ENST00000294854|RGSL1;REV__nc|ENSG00000121446|A5PLK6-6|RGSL1;REV__RGSL1|p.C239G|1|0.28|ENSG00000121446|chr1:182473826-182473826|T/G|missense_variant	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	8339	3718	12054
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12060	32.764	NaN	3521.2	30	0	309.2	0.106	+			801	AEFTKSIAKF	10	67	571.3170888554714	1140.6196247777427	2	571.3165893554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEFTKSIAKF_	ENSG00000118363|ENST00000263672|SPCS2	47.227680397652996	0.4825456260682108	2				NaN	NaN	0	NaN	8340	3718	12054
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12061	32.766	NaN	2596.7	30	0	195.69	0.033	+			20966	KKEIEAAI	8	64	451.2711181640625	NaN	0	451.2711181640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KKEIEAAI_	ENSG00000104856|ENST00000221452|RELB	50.0245360154114	1.7418937515398478	2				NaN	NaN	0	NaN	8341	3718	12054
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12072	32.791	NaN	25137	30	0	6479.4	0.214	+			28172	NAPLVHATL	9	70	468.2691382094699	934.5237234857398	2	468.26885986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAPLVHATL_	ENSG00000082898|ENST00000401558|XPO1;ENST00000428210.5_1_2:61720980-61752425:-|nuORF	93.19546047674547	0.05585629608842056	2				NaN	NaN	0	NaN	8349	3721	12071
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12073	32.794	NaN	14755	30	0	1575.6	0.106	+			34504	RVFVVGVGMTK	11	84	596.8469780896929	1191.6794032461858	2	596.8472290039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RVFVVGVGMTK_	ENSG00000116171|ENST00000371514|SCP2;ENST00000528311.5_1_1:53392996-53413692:+|nuORF;nc|ENSG00000116171|P22307-3|SCP2;nc|ENSG00000116171|P22307-7|SCP2;nc|ENSG00000116171|P22307-8|SCP2	92.79198069996022	0.08734507261651994	2				NaN	NaN	0	NaN	8350	3721	12071
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12074	32.796	NaN	5308.4	30	0	664.93	0.106	+			14590	GTFVMYSAK	9	72	502.2491923612855	NaN	0	502.2494201660156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTFVMYSAK_	nc|ENSG00000198788|Q02817|MUC2	68.84614121027924	0.11159004992091766	2				NaN	NaN	0	NaN	8351	3721	12071
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12075	32.798	NaN	3693.9	30	0	528.75	0.106	+			17327	IAGVTHLLP	9	61	460.78188137147686	919.5492098097537	2	460.7815856933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IAGVTHLLP_	CPEB2|p.C544Lfs*12|1|0.1|ENSG00000137449|chr4:15066233-15066234|-/T|frameshift_variant;CPEB2|p.C544Vfs*31|5|0.34|ENSG00000137449|chr4:15066234-15066234|T/-|frameshift_variant;ENSG00000137449|ENST00000538197|CPEB2;nc|ENSG00000137449|Q7Z5Q1-8|CPEB2	40.5726180659479	0.4135428067754104	2				NaN	NaN	0	NaN	8352	3721	12071
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12076	32.8	NaN	3083.7	30	0	292.54	0.106	+			28495	NGTGKLSIV	9	70	444.7607244899321	887.5068960466642	2	444.7606506347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NGTGKLSIV_	SMC5|p.S87L|1|0.37|ENSG00000198887|chr9:70264378-70264378|C/T|missense_variant	68.78682469695295	0.14603441672067394	2				NaN	NaN	0	NaN	8353	3721	12071
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12077	32.802	NaN	3337.4	30	0	721.99	0.106			+	35016	SACKVLSTSCY	11	47	387.84783941691114	1160.5216888509335	3	387.8479919433594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SACKVLSTSCY_	REV__ENSG00000132549|ENST00000357162|VPS13B;REV__nc|ENSG00000132549|Q7Z7G8-3|VPS13B;REV__nc|ENSG00000132549|Q7Z7G8-6|VPS13B;REV__nc|ENSG00000132549|Q7Z7G8|VPS13B;REV__VPS13B|p.I1913*|1|0.3|ENSG00000132549|chr8:99642246-99642246|A/-|frameshift_variant;REV__VPS13B|p.M3156Ifs*2|1|0.07|ENSG00000132549|chr8:99832427-99832428|-/TA|frameshift_variant;REV__VPS13B|p.S3988Lfs*4|1|0.55|ENSG00000132549|chr8:99875552-99875553|-/C|frameshift_variant;REV__VPS13B|p.S3988Pfs*25|1|0.11|ENSG00000132549|chr8:99875553-99875553|C/-|frameshift_variant	24.231819034082204	0.7356191775841856	2				NaN	NaN	0	NaN	8354	3721	12071
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12078	32.804	NaN	4968	30	0	425.18	0.036	+			51494	YVLKGHIAVS	10	72	543.819280897184	1085.6240088611678	2	543.8192138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YVLKGHIAVS_	ENSG00000108039|ENST00000502935|XPNPEP1;nc|ENSG00000108039|Q9NQW7-2|XPNPEP1;nc|ENSG00000108039|Q9NQW7-4|XPNPEP1;nc|ENSG00000108039|Q9NQW7|XPNPEP1	32.81241826257853	0.6118718159329168	2				NaN	NaN	0	NaN	8355	3721	12071
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12089	32.83	NaN	10153	30	0	1793	0.215	+			51033	YKSTDQKAF	9	72	544.2748525970026	1086.535152260805	2	544.2750244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YKSTDQKAF_	ENST00000570400.1_1_17:2541482-2541527:+|nuORF	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	8363	3724	12088
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12090	32.834	NaN	6732.2	30	0	848.06	0.106	+			1692	AGTNKGITALQ	11	79	537.3024384535294	1072.5903239738586	2	537.3016967773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AGTNKGITALQ_	ENSG00000138035|ENST00000447944|PNPT1;ENST00000260604.8_1_2:55870335-55906871:-|nuORF;ENST00000450418.1_1_3:4024244-4024472:-|nuORF;ENST00000481066.1_1_2:55872466-55874499:-|nuORF	72.2432373244024	0.21703855426835802	2				NaN	NaN	0	NaN	8364	3724	12088
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12091	32.836	NaN	6435.6	30	0	1360.2	0.106			+	13760	GQFFLNLR	8	72	497.77837846521163	993.5422039972233	2	498.2733154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GQFFLNLR_	REV__ENSG00000122966|ENST00000392521|CIT;REV__nc|ENSG00000122966|O14578-2|CIT;REV__nc|ENSG00000122966|O14578|CIT	42.47446043378293	0.6409579893742323	2				NaN	NaN	0	NaN	8365	3724	12088
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12092	32.838	NaN	5251.4	30	0	754.13	0.106	+			12528	GEFEKKYVATL	11	79	642.8450224144902	1283.6754918957804	2	642.8451538085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEFEKKYVATL_	ENSG00000132341|ENST00000543796|RAN	57.148748479083515	0.34890646465650643	2				NaN	NaN	0	NaN	8366	3724	12088
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12093	32.84	NaN	3656.7	30	0	348.51	0.106	+			24157	LELRATPEP	9	61	513.2847606303848	1024.5549683275694	2	513.2848510742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LELRATPEP_	ENSG00000164715|ENST00000297293|LMTK2	54.776311868738084	0.25715957988447635	2				NaN	NaN	0	NaN	8367	3724	12088
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12094	32.842	NaN	4020.1	30	0	412.49	0.106	+			38815	SSMVGVNLPQK	11	65	580.3106452359391	1158.606737538678	2	580.3109130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSMVGVNLPQK_	ENSG00000102144|ENST00000373316|PGK1;nc|ENSG00000102144|P00558-2|PGK1	89.02883481214508	0.10275031849113642	2				NaN	NaN	0	NaN	8368	3724	12088
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12095	32.843	NaN	5139.6	30	0	521.44	0.036			+	9906	EQPLHELLK	9	71	553.8142083589403	1105.6138637846805	2	554.8203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EQPLHELLK_	REV__ENSG00000132591|ENST00000254928|ERAL1;REV__ENST00000471992.1_1_17:27185141-27187568:+|nuORF	44.377184641726394	0.36891676396732553	2				NaN	NaN	0	NaN	8369	3724	12088
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12107	32.87	NaN	7203.6	30	0	1118.8	0.214	+			45986	VATHSTLVL	9	65	470.7757493507896	939.5369457683793	2	470.7762145996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VATHSTLVL_	ENSG00000065526|ENST00000375759|SPEN	65.80317337860623	0.1652391959156183	2				NaN	NaN	0	NaN	8378	3727	12106
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12108	32.873	NaN	8736.4	30	0	978.44	0.106	+			14353	GTAALGCLVK	10	78	495.275806096637	988.537059260074	2	495.27532958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GTAALGC(Carbamidomethyl (C))LVK_	ENST00000390555.3_1_14:106135325-106136152:-|nuORF;nc|ENSG00000211896|P01857-1|IGHG1;nc|ENSG00000211896|P01857|IGHG1;nc|ENSG00000211897|P01860-1|IGHG3;nc|ENSG00000211897|P01860|IGHG3	124.08010499294276	0.021567188538240013	2				NaN	NaN	0	NaN	8379	3727	12106
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12109	32.876	NaN	5236.3	30	0	450.06	0.106	+			10415	EVHAGLGELL	10	76	519.2854296340314	NaN	0	519.2855224609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EVHAGLGELL_	ENSG00000149257|ENST00000358171|SERPINH1	75.04331003522576	0.12385377892588857	2				NaN	NaN	0	NaN	8380	3727	12106
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12110	32.877	NaN	5983.5	30	0	456.48	0.106			+	30719	QDIEEYLKKK	10	80	647.3560370808383	1292.6975212284765	2	647.3560180664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QDIEEYLKKK_	REV__ENSG00000148795|ENST00000369887|CYP17A1	45.908116695636124	0.4947047446361497	2				NaN	NaN	0	NaN	8381	3727	12106
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12111	32.879	NaN	5915.5	30	0	650.76	0.106	+			39807	STLESIYQR	9	77	548.7849250430831	1095.5552971529662	2	548.7854614257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STLESIYQR_	ENSG00000166888|ENST00000300134|STAT6;ENST00000555641.1_1_12:57499966-57502061:-|nuORF;STAT6|p.G815Efs*27|3|0.31|ENSG00000166888|chr12:57096672-57096672|C/-|frameshift_variant	90.60085204095205	0.06317133949006545	2				NaN	NaN	0	NaN	8382	3727	12106
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12112	32.881	NaN	5603.7	30	0	926.93	0.106				-1	MSNVCPIQR	9	69	374.17959483628016	1119.5169551090405	3	374.1793212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))SNVC(Carbamidomethyl (C))PIQR_	ENSG00000185775|ENST00000332857|SPATA31A6;ENSG00000204849|ENST00000377647|SPATA31A1;ENSG00000275969|ENST00000428649|SPATA31A3;ENSG00000276040|ENST00000619167|SPATA31A7;ENSG00000276581|ENST00000437823|SPATA31A5;SPATA31A1|p.T1192Nfs*14|1|0.28|ENSG00000204849|chr9:39361333-39361334|-/A|frameshift_variant;SPATA31A1|p.T1192Qfs*2|2|0.24|ENSG00000204849|chr9:39361334-39361334|A/-|frameshift_variant;SPATA31A3|p.S1180Kfs*9|1|0.25|ENSG00000275969|chr9:66986959-66986960|-/T|frameshift_variant;SPATA31A6|p.N1191Tfs*16|1|0.12|ENSG00000185775|chr9:42189269-42189269|A/-|frameshift_variant;SPATA31A6|p.T1188Qfs*2|1|0.26|ENSG00000185775|chr9:42189259-42189259|A/-|frameshift_variant	20.94693142431847	0.6074874384046576	2				NaN	NaN	0	NaN	8383	3727	12106
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12113	32.883	NaN	2342.1	30	0	302.7	0.034			+	8598	ECGPFRKI	8	64	475.2497019963811	948.4848510595622	2	475.2491760253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ECGPFRKI_	REV__ENST00000314393.5_1_8:123794007-123963584:+|nuORF;REV__ENST00000534247.1_1_8:123875672-123963584:+|nuORF	47.91560031466742	0.6071945918984287	2				NaN	NaN	0	NaN	8384	3727	12106
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12124	32.909	NaN	9256	30	0	833.06	0.214	+			6844	CIPRERSL	8	68	515.7748620662773	1029.5351711993544	2	515.7796020507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_C(Carbamidomethyl (C))IPRERSL_	ENSG00000169247|ENST00000515425|SH3TC2;nc|ENSG00000169247|Q8TF17-5|SH3TC2	96.19043198914106	0.25873003980794995	2				NaN	NaN	0	NaN	8392	3730	12123
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12125	32.912	NaN	8554	30	0	701.85	0.106	+			8397	EANQHELLY	9	71	558.7698978134665	1115.525242693733	2	558.7702026367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EANQHELLY_	ENSG00000153029|ENST00000367580|MR1;ENST00000367578.1_1_1:181003164-181019478:+|nuORF;ENST00000438435.6_1_1:181006220-181024398:+|nuORF;MR1|p.P230Qfs*5|1|0.22|ENSG00000153029|chr1:181052314-181052314|C/-|frameshift_variant;nc|ENSG00000153029|Q95460-2|MR1;nc|ENSG00000153029|Q95460-3|MR1;nc|ENSG00000153029|Q95460-4|MR1;nc|ENSG00000153029|Q95460-5|MR1	94.00642277110589	0.05356993013874309	2				NaN	NaN	0	NaN	8393	3730	12123
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12126	32.915	NaN	6622.4	30	0	890.15	0.106	+			27584	MPKMDQDSL	9	75	532.7412502679556	1063.467947602711	2	532.7412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MPKMDQDSL_	ENSG00000079459|ENST00000220584|FDFT1;nc|ENSG00000079459|P37268-5|FDFT1	74.1650062923329	0.12277912660386392	2				NaN	NaN	0	NaN	8394	3730	12123
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12127	32.916	NaN	4531.6	30	0	846.65	0.106			+	6744	CDALGLPNTP	10	64	500.74140876955266	999.4682646059053	2	500.74163818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_CDALGLPNTP_	REV__ENST00000428388.6_1_6:32135427-32135845:+|nuORF;REV__ENST00000489721.1_1_6:32135321-32135845:+|nuORF	41.42661286455405	0.5359995577334734	2				NaN	NaN	0	NaN	8395	3730	12123
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12128	32.918	NaN	4614.6	30	0	341.39	0.106				-1	YECPQCGSAF	10	72	581.2207909009661	1160.4270288687321	2	581.2207641601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_YEC(Carbamidomethyl (C))PQCGSAF_	ENSG00000161298|ENST00000292928|ZNF382;nc|ENSG00000161298|Q96SR6-2|ZNF382;nc|ENSG00000161298|Q96SR6-3|ZNF382;ZNF382|p.E461Kfs*84|1|0.29|ENSG00000161298|chr19:36627274-36627274|G/-|frameshift_variant;ZNF382|p.K462Nfs*83|1|0.22|ENSG00000161298|chr19:36627279-36627279|A/-|frameshift_variant	32.81241826257853	0.6118718159329168	2				NaN	NaN	0	NaN	8396	3730	12123
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12129	32.92	NaN	5392.3	30	0	603.32	0.106	+			11948	FVIRDSSSY	9	66	537.2673115334042	1072.5200701336082	2	537.2667236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FVIRDSSSY_	ENSG00000131746|ENST00000254051|TNS4	95.81516180277367	0.04847050768394289	2				NaN	NaN	0	NaN	8397	3730	12123
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12130	32.922	NaN	4249.9	30	0	406.15	0.034	+			5964	AVLLPQPPK	9	67	481.80505901461436	NaN	0	481.80511474609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AVLLPQPPK_	AluSp_dup17171|chr6:42956085-42956345:+|2.9082291479174875|0.2092895351215914|3.8|479.0|11|1|anti-sense;nc|ENSG00000153094|O43521-12|BCL2L11	47.91560031466742	0.22105767942158736	2				NaN	NaN	0	NaN	8398	3730	12123
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12141	32.948	NaN	6848.2	30	0	639.17	0.214	+			12401	GEAEGLMKV	9	69	467.23917606711643	932.4637992010329	2	467.2388916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEAEGLMKV_	ENSG00000157637|ENST00000374759|SLC38A10;nc|ENSG00000157637|Q9HBR0-2|SLC38A10;nc|ENSG00000157637|Q9HBR0-3|SLC38A10;SLC38A10|p.R413W|1|0.54|ENSG00000157637|chr17:81260289-81260289|G/A|missense_variant	104.0567914643314	0.03506238181059741	2				NaN	NaN	0	NaN	8406	3733	12140
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12142	32.951	NaN	7559.7	30	0	643.87	0.106	+			25614	LQNNQLEKI	9	78	550.3094544965497	1098.6043560598994	2	550.3097534179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LQNNQLEKI_	ENSG00000174348|ENST00000312553|PODN;nc|ENSG00000174348|Q7Z5L7-2|PODN;nc|ENSG00000174348|Q7Z5L7-3|PODN;PODN|p.I380Sfs*55|1|0.26|ENSG00000174348|chr1:53078499-53078499|C/-|frameshift_variant;PODN|p.P303Rfs*7|3|0.25|ENSG00000174348|chr1:53077705-53077705|C/-|frameshift_variant;PODN|p.R543Vfs*77|1|0.42|ENSG00000174348|chr1:53078989-53078989|C/-|frameshift_variant	158.07458414430337	0.004987072822166904	2				NaN	NaN	0	NaN	8407	3733	12140
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12143	32.953	NaN	4217.5	30	0	1056	0.106	+			42435	TALHVAASL	9	62	441.7557807072045	881.497008481209	2	441.7556457519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TALHVAASL_	ENSG00000144802|ENST00000326172|NFKBIZ;ENST00000495719.1_1_3:101576051-101578212:+|nuORF;nc|ENSG00000144802|Q9BYH8-2|NFKBIZ;nc|ENSG00000144802|Q9BYH8-3|NFKBIZ	73.97473282117947	0.12360187025703594	2				NaN	NaN	0	NaN	8408	3733	12140
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12144	32.955	NaN	5591.1	30	0	1335.2	0.106	+			20626	KGFQRPVY	8	69	497.77837846521163	993.5422039972233	2	497.77923583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KGFQRPVY_	ENSG00000146834|ENST00000310512|MEPCE;nc|ENSG00000289690|Q7L2J0-2|MEPCE	42.47446043378293	0.6409579893742323	2				NaN	NaN	0	NaN	8409	3733	12140
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12145	32.957	NaN	2664.5	30	0	677.8	0.106	+			27017	LYRVIASHEG	10	54	382.2098279570732	NaN	0	382.2097473144531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LYRVIASHEG_	ENSG00000042781|ENST00000307340|USH2A;nc|ENSG00000042781|O75445-3|USH2A;USH2A|p.E5096Gfs*82|1|0.44|ENSG00000042781|chr1:215634469-215634470|-/C|frameshift_variant;USH2A|p.T3753Lfs*31|1|0.37|ENSG00000042781|chr1:215758727-215758727|T/-|frameshift_variant;USH2A|p.W2964Gfs*10|1|0.21|ENSG00000042781|chr1:215845989-215845989|A/-|frameshift_variant	36.446750945000026	0.3805027428805705	2				NaN	NaN	0	NaN	8410	3733	12140
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12146	32.959	NaN	4806.2	30	0	1240.5	0.106	+			3794	ATAGIAIPALG	11	63	477.78449206514506	953.5544311970901	2	477.7843933105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATAGIAIPALG_	ENST00000478399.5_1_3:119298211-119298877:+|nuORF	34.172542307311794	0.6313490974540716	2				NaN	NaN	0	NaN	8411	3733	12140
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12147	32.96	NaN	3941.3	30	0	366.01	0.034	+			12995	GEVDPKVAL	9	65	464.261192393144	926.507831853088	2	464.2606201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GEVDPKVAL_	ENSG00000099795|ENST00000215565|NDUFB7;ENST00000593353.5_1_19:14676947-14682853:-|nuORF	52.936696900407355	0.27249468807391813	2				NaN	NaN	0	NaN	8412	3733	12140
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12160	32.987	NaN	136330	30	0	18815	0.165	+			12615	GEIDGNKVTL	10	87	523.2802522155451	1044.5459514978902	2	523.2808227539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEIDGNKVTL_	ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232319904-232323320:-|nuORF	128.60217544463768	0.01518043149187549	2				NaN	NaN	0	NaN	8422	3736	12159
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12161	32.99	NaN	18747	30	0	3267.2	0.106	+			19253	KAEAHFSLV	9	77	501.27438042548255	1000.5342079177651	2	501.2745666503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KAEAHFSLV_	ENSG00000006788|ENST00000252172|MYH13;MYH13|p.K1396Nfs*37|1|0.46|ENSG00000006788|chr17:10312751-10312751|T/-|frameshift_variant	68.78682469695295	0.14603441672067394	2				NaN	NaN	0	NaN	8423	3736	12159
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12162	32.992	NaN	8580.6	30	0	1036.6	0.106			+	22171	KSSIFPRT	8	74	468.2691382094699	934.5237234857398	2	469.27130126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KSSIFPRT_	REV__ENSG00000106772|ENST00000376718|PRUNE2;REV__ENSG00000140299|ENST00000607373|BNIP2;REV__ENST00000560776.1_1_15:59961053-59961500:-|nuORF;REV__nc|ENSG00000106772|Q8WUY3-2|PRUNE2;REV__nc|ENSG00000106772|Q8WUY3-3|PRUNE2;REV__nc|ENSG00000106772|Q8WUY3-4|PRUNE2;REV__nc|ENSG00000106772|Q8WUY3-5|PRUNE2;REV__nc|ENSG00000140299|Q12982-2|BNIP2	34.172542307311794	0.6954784234644539	2				NaN	NaN	0	NaN	8424	3736	12159
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12163	32.994	NaN	9789.4	30	0	1716.5	0.106	+			39224	STAIFTCDL	9	79	485.73196967369677	969.4493864141936	2	485.7314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STAIFTCDL_	CSMD3|p.A3641Cfs*13|1|0.36|ENSG00000164796|chr8:112228799-112228800|-/A|frameshift_variant;CSMD3|p.F3640Lfs*61|7|0.35|ENSG00000164796|chr8:112228800-112228800|A/-|frameshift_variant;CSMD3|p.G3063Rfs*5|1|0.06|ENSG00000164796|chr8:112287208-112287209|-/G|frameshift_variant;ENSG00000164796|ENST00000297405|CSMD3;nc|ENSG00000164796|Q7Z407-2|CSMD3;nc|ENSG00000164796|Q7Z407-3|CSMD3;nc|ENSG00000164796|Q7Z407-4|CSMD3	71.29570347882199	0.13518600952103718	2				NaN	NaN	0	NaN	8425	3736	12159
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12164	32.996	NaN	6887	30	0	1545.7	0.106			+	14410	GTAPLVILSH	10	59	336.534227507259	NaN	0	336.53436279296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTAPLVILSH_	REV__ENST00000444374.1_1_9:92316696-92316852:+|nuORF	21.9598887501803	0.4201028297492154	2				NaN	NaN	0	NaN	8426	3736	12159
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12165	32.998	NaN	6979.7	30	0	635.02	0.106			+	42715	TDFLGPTDVVL	11	80	588.808476382709	1175.602399832218	2	588.8068237304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TDFLGPTDVVL_	REV__ENSG00000179144|ENST00000313543|GIMAP7;REV__GIMAP7|p.I261*|1|0.41|ENSG00000179144|chr7:150520750-150520750|A/-|frameshift_variant;REV__GIMAP7|p.N263Kfs*7|1|0.39|ENSG00000179144|chr7:150520756-150520757|-/A|frameshift_variant	47.657333605630114	0.4531673460382624	2				NaN	NaN	0	NaN	8427	3736	12159
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12166	32.999	NaN	9820.1	30	0	1178.8	0.033	+			13022	GEVLISRV	8	62	436.76372420220036	871.5128954712007	2	436.76373291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GEVLISRV_	AP2M1|p.I386Hfs*6|1|0.17|ENSG00000161203|chr3:184182844-184182845|-/C|frameshift_variant;ENSG00000161203|ENST00000292807|AP2M1;ENST00000466598.5_1_3:183894781-183896942:+|nuORF;ENST00000472560.5_1_3:183894781-183898834:+|nuORF;ENST00000484469.5_1_3:183894781-183895400:+|nuORF;ENST00000487958.5_1_3:183894781-183898060:+|nuORF;nc|ENSG00000161203|Q96CW1-2|AP2M1	67.49366992349736	0.4277823096851425	2				NaN	NaN	0	NaN	8428	3736	12159
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12177	33.023	NaN	8663.4	30	0	1348.6	0.214	+			9182	EGQGLLLKI	9	69	485.80016533564924	969.5857777380985	2	485.7998962402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EGQGLLLKI_	ENST00000393892.7_1_17:40127921-40128083:+|nuORF	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	8436	3739	12176
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12178	33.027	NaN	12195	30	0	3181	0.106			+	-1	HPPVMPTDL	9	83	511.75171380924417	1021.4888746852884	2	511.7508239746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_HPPVM(Oxidation (M))PTDL_	REV__ENSG00000066336|ENST00000378538|SPI1;REV__nc|ENSG00000066336|P17947-2|SPI1	47.91560031466742	0.327412564698279	2				NaN	NaN	0	NaN	8437	3739	12176
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12179	33.029	NaN	6286.5	30	0	2699.7	0.106			+	21009	KKGTQDGL	8	58	423.7378580409522	845.4611631487044	2	423.73736572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KKGTQDGL_	REV__COLEC12|p.G581Rfs*17|1|0.2|ENSG00000158270|chr18:334817-334818|-/G|frameshift_variant;REV__COLEC12|p.K656Nfs*4|2|0.27|ENSG00000158270|chr18:331763-331763|T/-|frameshift_variant;REV__COLEC12|p.K92Q|1|0.4|ENSG00000158270|chr18:348071-348071|T/G|missense_variant;REV__COLEC12|p.P608Rfs*38|1|0.22|ENSG00000158270|chr18:333137-333137|G/-|frameshift_variant;REV__ENSG00000158270|ENST00000400256|COLEC12;REV__ENST00000582147.1_1_18:334691-500598:-|nuORF	55.50420428727701	0.5462892107279674	2				NaN	NaN	0	NaN	8438	3739	12176
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12180	33.03	NaN	11322	30	0	1482	0.106	+			27290	MGNSYAGQLK	10	76	534.7603854425673	1067.5062179519346	2	534.7608642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MGNSYAGQLK_	ENSG00000141449|ENST00000424526|GREB1L;ENSG00000196208|ENST00000381486|GREB1;ENST00000578368.5_1_18:18963479-19048745:+|nuORF;ENST00000584446.5_1_18:18963479-19034595:+|nuORF;GREB1|p.K190Efs*7|1|0.05|ENSG00000196208|chr2:11576461-11576462|-/T|frameshift_variant;GREB1|p.K311Nfs*65|1|0.16|ENSG00000196208|chr2:11585181-11585181|C/-|frameshift_variant;GREB1|p.L189Ffs*12|1|0.05|ENSG00000196208|chr2:11576462-11576463|-/TTTCTTTTTTTTT|frameshift_variant;GREB1L|p.G1039Qfs*16|1|0.06|ENSG00000141449|chr18:21495754-21495755|GG/-|frameshift_variant;GREB1L|p.T1038Kfs*19|1|0.06|ENSG00000141449|chr18:21495751-21495752|-/AACT|frameshift_variant;nc|ENSG00000141449|Q9C091-3|GREB1L;nc|ENSG00000141449|Q9C091-4|GREB1L;nc|ENSG00000196208|Q4ZG55-2|GREB1;nc|ENSG00000196208|Q4ZG55-3|GREB1	65.46538089061403	0.31613324008013116	2				NaN	NaN	0	NaN	8439	3739	12176
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12181	33.032	NaN	5580.5	30	0	1160.4	0.106			+	27271	MFIFILLY	8	67	530.3010628077454	1058.5875726822908	2	530.3012084960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MFIFILLY_	REV__ENST00000558159.1_1_15:44958153-44958801:-|nuORF	43.626045697637714	0.6338121648150432	2				NaN	NaN	0	NaN	8440	3739	12176
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12182	33.034	NaN	4165	30	0	343.08	0.106				-1	KNLPSTALCQM	11	76	631.816013240674	1261.617473548148	2	631.8167114257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_KNLPSTALC(Carbamidomethyl (C))QM_	ENSG00000188566|ENST00000684003|NDOR1;nc|ENSG00000188566|Q9UHB4-2|NDOR1;nc|ENSG00000188566|Q9UHB4-3|NDOR1;nc|ENSG00000188566|Q9UHB4-4|NDOR1	29.170058357718403	0.683821074385409	2				NaN	NaN	0	NaN	8441	3739	12176
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12183	33.036	NaN	9020.8	30	0	766.36	0.036	+			25867	LSFLISAKGR	10	78	546.3326892422342	1090.6508255512683	2	546.3331909179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSFLISAKGR_	ENST00000409891.5_1_2:175446079-175446118:-|nuORF	68.62578634547417	0.2885473079336931	2				NaN	NaN	0	NaN	8442	3739	12176
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12194	33.061	NaN	24009	30	0	11709	0.214	+			39563	STGHVGFIFK	10	92	364.8658544366101	1091.5757339100303	3	364.8660583496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STGHVGFIFK_	ENSG00000137575|ENST00000260130|SDCBP;ENST00000523441.1_1_8:59490633-59492419:+|nuORF;nc|ENSG00000137575|O00560-2|SDCBP;nc|ENSG00000137575|O00560-3|SDCBP	45.97224482568171	0.49411383603842696	2				NaN	NaN	0	NaN	8450	3742	12193
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12195	33.065	NaN	6909.9	30	0	1347.1	0.106	+			34856	RYSSMAASF	9	65	510.2344083192549	1018.4542637053098	2	510.2345886230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RYSSMAASF_	ENSG00000162366|ENST00000294338|PDZK1IP1	52.936696900407355	0.27249468807391813	2				NaN	NaN	0	NaN	8451	3742	12193
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12196	33.067	NaN	5510.9	30	0	871.03	0.106				-1	VVGCSCRCL	9	69	576.7514092641385	1151.4882655950769	2	576.7516479492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term),3 Carbamidomethyl (C)	_(Acetyl (Protein N-term))VVGC(Carbamidomethyl (C))SC(Carbamidomethyl (C))RC(Carbamidomethyl (C))L_	ENST00000525718.5_1_11:833019-834025:+|nuORF	38.80614096846853	0.43426287593479557	2				NaN	NaN	0	NaN	8452	3742	12193
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12197	33.069	NaN	5763.5	30	0	840.11	0.106	+			37780	SLWQQVPSRC	10	69	602.3001923361594	1202.5858317391187	2	602.2998657226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLWQQVPSRC_	ENST00000526955.1_1_11:125281302-125301285:+|nuORF	43.650786325866115	0.5155049133366767	2				NaN	NaN	0	NaN	8453	3742	12193
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12198	33.07	NaN	3727.2	30	0	526.25	0.106			+	-1	TQVLEMGLCNL	11	76	618.8019229699372	1235.5892930066743	2	618.8019409179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_TQVLEM(Oxidation (M))GLCNL_	REV__CHD8|p.P2383L|1|0.37|ENSG00000100888|chr14:21390981-21390981|G/A|missense_variant	45.02220120713402	0.4892240028381124	2				NaN	NaN	0	NaN	8454	3742	12193
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12199	33.072	NaN	4121.4	30	0	1943.4	0.106	+			17409	IARSLGVLP	9	51	463.29510806470086	924.5756631962017	2	463.29473876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IARSLGVLP_	sp|P16780|UL40_HCMVAProteinUL40OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL40PE=1SV=1;sp|Q6SW92|UL40_HCMVMProteinUL40OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL40PE=3SV=1	42.47446043378293	0.39123495718708534	2				NaN	NaN	0	NaN	8455	3742	12193
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12200	33.074	NaN	7146.7	30	0	1179.9	0.035			+	34313	RTMRCAAGL	9	70	518.263661128205	1034.5127693232098	2	518.26220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_RTMRC(Carbamidomethyl (C))AAGL_	REV__ENST00000369535.4_1_1:115258780-115259488:-|nuORF	71.87747018426188	0.13267044672804276	2				NaN	NaN	0	NaN	8456	3742	12193
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12205	33.088	NaN	57246	30	0	20464	0.214	+			14989	GTMTGMLYK	9	89	501.2433266290003	1000.4721003248006	2	501.2428894042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTMTGMLYK_	ENSG00000178440|ENST00000651763|TIMM23B-AGAP6;ENSG00000204152|ENST00000651259|TIMM23B;ENSG00000265354|ENST00000580018|TIMM23;nc|ENSG00000204152|Q5SRD1-2|TIMM23B	118.74307786436346	0.02196067127630568	2				NaN	NaN	0	NaN	8458	3745	12204
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12206	33.092	NaN	12765	30	0	1936.5	0.106	+			15253	GTTDFIHLK	9	72	516.2801065611812	1030.5456601891624	2	516.2798461914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTTDFIHLK_	ACTR3B-JMJD1C|1|fusion;ENSG00000171988|ENST00000399262|JMJD1C;JMJD1C|p.A2114Cfs*5|1|0.04|ENSG00000171988|chr10:63189399-63189400|-/T|frameshift_variant;JMJD1C|p.I2113Kfs*18|1|0.04|ENSG00000171988|chr10:63189400-63189401|-/TT|frameshift_variant;nc|ENSG00000171988|Q15652-2|JMJD1C;nc|ENSG00000171988|Q15652-3|JMJD1C	85.16082228582465	0.07850854922700509	2				NaN	NaN	0	NaN	8459	3745	12204
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12207	33.094	NaN	11681	30	0	1406.5	0.106	+			962	AEKALFRAL	9	88	340.2061051907849	1017.5964861725547	3	340.2061767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEKALFRAL_	ENSG00000055044|ENST00000264279|NOP58;ENSG00000101361|ENST00000329276|NOP56	80.45461616416974	0.09558281504443908	2				NaN	NaN	0	NaN	8460	3745	12204
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12208	33.096	NaN	12241	30	0	1011.5	0.106	+			14675	GTIFGIYRK	9	77	527.8061242388393	1053.5976955444785	2	527.8058471679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTIFGIYRK_	ENSG00000165140|ENST00000375326|FBP1;FBP1|p.G294Efs*11|1|0.11|ENSG00000165140|chr9:94603517-94603517|C/-|frameshift_variant	71.87747018426188	0.13267044672804276	2				NaN	NaN	0	NaN	8461	3745	12204
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12209	33.098	NaN	4685.2	30	0	603.35	0.106	+			33596	RLPAPPGAL	9	58	446.27468232616326	890.5348117191265	2	446.2742004394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RLPAPPGAL_	ENSG00000167548|ENST00000301067|KMT2D;KMT2D|p.A5076Hfs*2|1|0.12|ENSG00000167548|chr12:49026740-49026740|C/-|frameshift_variant;KMT2D|p.G5182Afs*61|1|0.57|ENSG00000167548|chr12:49026421-49026421|C/-|frameshift_variant;KMT2D|p.S4327Afs*57|1|0.44|ENSG00000167548|chr12:49031727-49031727|G/-|frameshift_variant;KMT2D|p.T4629Hfs*18|1|0.31|ENSG00000167548|chr12:49030394-49030395|-/G|frameshift_variant;KMT2D|p.T4629Pfs*11|1|0.27|ENSG00000167548|chr12:49030395-49030395|G/-|frameshift_variant;nc|ENSG00000167548|O14686-3|KMT2D	26.79610172149135	0.5528238334041078	2				NaN	NaN	0	NaN	8462	3745	12204
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12210	33.099	NaN	3292.7	30	0	755.06	0.106			+	29538	PEILLIDFD	9	56	358.86199201984186	1073.5641466597256	3	358.8618469238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PEILLIDFD_	REV__tr|U7SMN6|U7SMN6_FUSNUExtracellularproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01761PE=4SV=1	23.04248740728303	0.5879033540491928	2				NaN	NaN	0	NaN	8463	3745	12204
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12211	33.101	NaN	6894.9	30	0	564.9	0.036	+			42852	TEFTNKNML	9	82	549.2678094328821	1096.5210659325642	2	549.26806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TEFTNKNML_	ENSG00000167600|ENST00000310054|CYP2S1;nc|ENSG00000167600|Q96SQ9-2|CYP2S1	65.46538089061403	0.16805504838372562	2				NaN	NaN	0	NaN	8464	3745	12204
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12221	33.123	NaN	50587	30	0	4767.6	0.215	+			41365	SVMELARLK	9	93	523.8053520808812	1045.5961512285623	2	523.8057250976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVMELARLK_	ENSG00000115649|ENST00000360507|CNPPD1	128.60217544463768	0.015992218256422188	2				NaN	NaN	0	NaN	8471	3748	12220
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12222	33.127	NaN	20242	30	0	4468.6	0.106	+			6285	AVSTFAMVK	9	79	477.25960203946227	952.5046511457246	2	477.2596130371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVSTFAMVK_	ENSG00000172893|ENST00000355527|DHCR7;ENST00000534701.1_1_11:71149825-71152361:-|nuORF	60.11826168202944	0.21262886028301267	2				NaN	NaN	0	NaN	8472	3748	12220
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12223	33.129	NaN	7888.8	30	0	1761.4	0.106	+			32838	RCPGTDVIMI	10	66	552.7804654423232	1103.5463779514464	2	552.7811889648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RCPGTDVIMI_	ADGRL3|p.H1275Lfs*11|1|0.08|ENSG00000150471|chr4:62070322-62070322|A/-|frameshift_variant;ADGRL3|p.P107Sfs*9|1|0.45|ENSG00000150471|chr4:61676869-61676870|-/T|frameshift_variant;ADGRL3|p.P254Lfs*10|1|0.22|ENSG00000150471|chr4:61733117-61733117|C/-|frameshift_variant;ADGRL3|p.S1005Nfs*24|1|0.05|ENSG00000150471|chr4:61983584-61983585|-/ACATCCAG|frameshift_variant;ADGRL3|p.W832Lfs*13|1|0.39|ENSG00000150471|chr4:61948167-61948168|-/T|frameshift_variant;ADGRL3|p.Y966Lfs*9|1|0.19|ENSG00000150471|chr4:61983464-61983465|-/T|frameshift_variant;ENSG00000150471|ENST00000683033|ADGRL3;nc|ENSG00000150471|Q9HAR2-2|ADGRL3;nc|ENSG00000150471|Q9HAR2-3|ADGRL3;nc|ENSG00000150471|Q9HAR2-4|ADGRL3;nc|ENSG00000150471|Q9HAR2|ADGRL3	74.25504064058377	0.24255678544297835	2				NaN	NaN	0	NaN	8473	3748	12220
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12224	33.13	NaN	9051.5	30	0	1476.1	0.106	+			34747	RYALQMEQL	9	74	584.2953227207071	1166.576092508214	2	584.2958374023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_RYALQM(Oxidation (M))EQL_	ENSG00000111057|ENST00000388835|KRT18;ENST00000411618.1_1_9:30799684-30799825:-|nuORF;ENST00000549078.5_1_12:53344429-53346127:+|nuORF	93.5975768576971	0.05472259948179787	2				NaN	NaN	0	NaN	8474	3748	12220
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12225	33.132	NaN	8406.9	30	0	1279.7	0.106	+			32878	RDHAREAE	8	70	492.2377725794302	982.4609922256604	2	492.23846435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RDHAREAE_	ENST00000333957.8_1_12:22697022-22697471:-|nuORF	63.30626980617807	0.4690498839812213	2				NaN	NaN	0	NaN	8475	3748	12220
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12226	33.134	NaN	8636.9	30	0	2639.9	0.106	+			23859	LDEETQYQ	8	67	513.2226950330532	1024.4308371329064	2	513.2232055664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LDEETQYQ_	ENSG00000134758|ENST00000261593|RNF138;nc|ENSG00000134758|Q8WVD3-2|RNF138	29.14955571784316	0.7342621283720113	2				NaN	NaN	0	NaN	8476	3748	12220
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12227	33.136	NaN	6882.8	30	0	1128.8	0.037	+			17761	IERYPEETL	9	73	575.2932854902317	1148.5720180472633	2	575.2937622070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IERYPEETL_	ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC;PRKDC|p.K3681Nfs*6|1|0.32|ENSG00000253729|chr8:47785174-47785177|TTCT/-|frameshift_variant;PRKDC|p.M3670*|1|0.5|ENSG00000253729|chr8:47785212-47785212|T/-|frameshift_variant;PRKDC|p.M3846Cfs*12|1|0.13|ENSG00000253729|chr8:47779047-47779047|T/-|frameshift_variant;PRKDC|p.M4020Cfs*2|1|0.31|ENSG00000253729|chr8:47776968-47776968|T/-|frameshift_variant;PRKDC|p.N3605Kfs*3|1|0.22|ENSG00000253729|chr8:47788993-47788994|-/T|frameshift_variant;PRKDC|p.N4037Ifs*15|1|0.17|ENSG00000253729|chr8:47776916-47776916|T/-|frameshift_variant;PRKDC|p.S4099Qfs*6|1|0.25|ENSG00000253729|chr8:47774265-47774265|A/-|frameshift_variant	58.2462437865262	0.22823408064396822	2				NaN	NaN	0	NaN	8477	3748	12220
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12234	33.152	NaN	67131	30	0	14991	0.208	+			51512	YVRELYTV	8	84	521.7823052698211	1041.5500576064421	2	521.7826538085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YVRELYTV_	ENSG00000101977|ENST00000519895|MCF2;MCF2|p.R820Kfs*12|1|0.54|ENSG00000101977|chrX:139587779-139587780|-/T|frameshift_variant;nc|ENSG00000101977|P10911-2|MCF2;nc|ENSG00000101977|P10911-3|MCF2;nc|ENSG00000101977|P10911-4|MCF2;nc|ENSG00000101977|P10911-6|MCF2;nc|ENSG00000101977|P10911|MCF2	58.78195531508484	0.5138399468736706	2				NaN	NaN	0	NaN	8481	3751	12233
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12235	33.155	NaN	8187.6	30	0	1506.5	0.106	+			39502	STFNQVVLK	9	76	518.2957545331876	1034.5769561331751	2	518.2957763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STFNQVVLK_	ENSG00000063177|ENST00000549920|RPL18;ENST00000478088.1_1_16:76269257-76269449:-|nuORF;ENST00000547892.1_1_19:49120227-49120731:-|nuORF;ENST00000552347.5_1_19:49120227-49122400:-|nuORF;ENST00000552705.5_1_19:49119841-49122400:-|nuORF;ENST00000552851.1_1_19:49119841-49122400:-|nuORF;nc|ENSG00000063177|Q07020-2|RPL18	139.97047562133406	0.010493916756945389	2				NaN	NaN	0	NaN	8482	3751	12233
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12236	33.158	NaN	13153	30	0	1432.3	0.106	+			41366	SVMELARLK	9	83	523.8053520808812	1045.5961512285623	2	524.8072509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVMELARLK_	ENSG00000115649|ENST00000360507|CNPPD1	76.16968421966216	0.11411088698345859	2				NaN	NaN	0	NaN	8483	3751	12233
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12237	33.159	NaN	5215.3	30	0	899.07	0.106	+			12946	GESSLILKA	9	59	459.26901106827654	916.5234692033531	2	459.268798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GESSLILKA_	ENSG00000139567|ENST00000388922|ACVRL1	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	8484	3751	12233
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12238	33.161	NaN	4072	30	0	335.59	0.106	+			50996	YISEETRVL	9	71	555.2947807706195	1108.5750086080388	2	555.2959594726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YISEETRVL_	ENSG00000121892|ENST00000303538|PDS5A	53.351449002276354	0.2690372970092375	2				NaN	NaN	0	NaN	8485	3751	12233
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12239	33.163	NaN	5915.9	30	0	777.43	0.106			+	25245	LNIFDVIKN	9	74	538.3111507095216	1074.607748485843	2	538.3113403320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LNIFDVIKN_	REV__tr|U7SKV9|U7SKV9_FUSNUGlycosyltransferasefamily1domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01950PE=4SV=1	58.78195531508484	0.22376836668196862	2				NaN	NaN	0	NaN	8486	3751	12233
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12240	33.165	NaN	4007.6	30	0	773.43	0.033	+			8882	EESPAPTL	8	68	422.2095121889951	842.4044714447903	2	422.2087707519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EESPAPTL_	ENSG00000147509|ENST00000297313|RGS20;nc|ENSG00000147509|O76081-2|RGS20;nc|ENSG00000147509|O76081-3|RGS20;nc|ENSG00000147509|O76081-5|RGS20;nc|ENSG00000147509|O76081-6|RGS20	33.51558372728122	0.7005509609380386	2				NaN	NaN	0	NaN	8487	3751	12233
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12250	33.187	NaN	15306	30	0	2834.5	0.214	+			11212	FIAPTGHSL	9	76	471.75583855097796	941.4971241687559	2	471.75531005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FIAPTGHSL_	ENSG00000125354|ENST00000394610|SEPTIN6;ENSG00000138758|ENST00000264893|SEPTIN11;nc|ENSG00000125354|Q14141-3|SEPTIN6;nc|ENSG00000125354|Q14141-4|SEPTIN6;nc|ENSG00000125354|Q14141|SEPTIN6;nc|ENSG00000138758|Q9NVA2-2|SEPTIN11	55.50420428727701	0.2510918378945873	2				NaN	NaN	0	NaN	8494	3754	12249
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12251	33.191	NaN	6518	30	0	576.33	0.106	+			23560	LALDASQHSSL	11	69	571.2965575008916	1140.578562068583	2	571.296142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LALDASQHSSL_	ENSG00000113621|ENST00000358387|TXNDC15;nc|ENSG00000113621|Q96J42-2|TXNDC15	86.88156770896713	0.11154061753057586	2				NaN	NaN	0	NaN	8495	3754	12249
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12252	33.193	NaN	8244.6	30	0	681.24	0.106	+			19911	KEFDGKSLVSV	11	83	604.8300928326953	1207.6456327321905	2	604.8295288085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEFDGKSLVSV_	ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;ENST00000517330.1_1_5:77337712-77337985:-|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P;nc|ENSG00000205940|Q58FF8|HSP90AB2P	131.115847015877	0.0012139520786195257	2				NaN	NaN	0	NaN	8496	3754	12249
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12253	33.195	NaN	10157	30	0	1330.4	0.106	+			36524	SFEDAKEAL	9	76	505.24526518415234	1008.4759774351047	2	505.24481201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SFEDAKEAL_	ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232319904-232323320:-|nuORF	98.58198989935565	0.04066992115528678	2				NaN	NaN	0	NaN	8497	3754	12249
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12254	33.196	NaN	5505.3	30	0	865.23	0.106			+	25607	LQLKPPQP	8	65	460.78188137147686	919.5492098097537	2	460.7812194824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LQLKPPQP_	REV__ENSG00000223731|ENST00000686983|SUPT20HL1;REV__nc|ENSG00000223731|Q3ZLR7|SUPT20HL1	55.50420428727701	0.5462892107279674	2				NaN	NaN	0	NaN	8498	3754	12249
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12255	33.198	NaN	9008.8	30	0	1217.8	0.106	+			37123	SITGFFQRK	9	74	542.3011277093366	1082.587702485473	2	542.3011474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SITGFFQRK_	ENSG00000077514|ENST00000263681|POLD3;ENST00000530163.1_1_11:74340223-74351808:+|nuORF;nc|ENSG00000077514|Q15054-2|POLD3;nc|ENSG00000077514|Q15054-3|POLD3	96.0336014099291	0.047854655524928534	2				NaN	NaN	0	NaN	8499	3754	12249
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12256	33.2	NaN	7015.2	30	0	990.63	0.036	+			37334	SLELDHLNF	9	73	544.2748525970026	1086.535152260805	2	544.27490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SLELDHLNF_	ENSG00000007314|ENST00000435607|SCN4A;SCN4A|p.D1309Tfs*4|1|0.19|ENSG00000007314|chr17:63943842-63943842|C/-|frameshift_variant;SCN4A|p.E974Rfs*5|1|0.4|ENSG00000007314|chr17:63949462-63949463|-/G|frameshift_variant	44.116797842482775	0.37197099687881774	2				NaN	NaN	0	NaN	8500	3754	12249
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12267	33.225	NaN	16884	30	0	4497.4	0.214	+			19912	KEFDGKSLVSV	11	69	403.55566904621605	1207.6451777388481	3	403.555419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEFDGKSLVSV_	ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;ENST00000517330.1_1_5:77337712-77337985:-|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P;nc|ENSG00000205940|Q58FF8|HSP90AB2P	33.921630207806714	0.6339809607503234	2				NaN	NaN	0	NaN	8508	3757	12266
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12268	33.228	NaN	9150.5	30	0	2147	0.106	+			17786	IETLTKTAL	9	73	495.29756205943204	988.5805711856641	2	495.2972717285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IETLTKTAL_	ENSG00000197879|ENST00000648651|MYO1C;nc|ENSG00000197879|O00159-2|MYO1C;nc|ENSG00000197879|O00159-3|MYO1C	51.52775601994872	0.28504342437107444	2				NaN	NaN	0	NaN	8509	3757	12266
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12269	33.23	NaN	6768	30	0	610.24	0.106	+			12852	GEPGCTQAQVL	11	77	580.2750389067612	1158.5355248803223	2	580.2745361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_GEPGC(Carbamidomethyl (C))TQAQVL_	ENSG00000137076|ENST00000314888|TLN1;nc|ENSG00000137076|Q9Y490-2|TLN1;TLN1|p.P1628Rfs*20|1|0.44|ENSG00000137076|chr9:35707144-35707144|G/-|frameshift_variant	88.1336951990783	0.1064147647397003	2				NaN	NaN	0	NaN	8510	3757	12266
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12270	33.232	NaN	4291.4	30	0	535.11	0.106	+			4135	ATEPPTESLLK	11	73	593.3216589226633	1184.6287649121266	2	593.3217163085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATEPPTESLLK_	ENSG00000058668|ENST00000357681|ATP2B4;nc|ENSG00000058668|P23634-2|ATP2B4;nc|ENSG00000058668|P23634-3|ATP2B4;nc|ENSG00000058668|P23634-4|ATP2B4;nc|ENSG00000058668|P23634-5|ATP2B4;nc|ENSG00000058668|P23634-7|ATP2B4;nc|ENSG00000058668|P23634-8|ATP2B4;nc|ENSG00000058668|P23634|ATP2B4	58.2462437865262	0.33910980880557884	2				NaN	NaN	0	NaN	8511	3757	12266
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12271	33.234	NaN	6142.2	30	0	1751	0.106	+			45767	VAFVQALGFLP	11	53	387.8937173386649	1160.6593226161947	3	387.893310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VAFVQALGFLP_	ENST00000274376.10_1_5:86563995-86564106:+|nuORF	27.047317107675042	0.7060868989289394	2				NaN	NaN	0	NaN	8512	3757	12266
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12272	33.236	NaN	5007.3	30	0	1173	0.106			+	46783	VHFCNPGFVT	10	70	374.1795642947136	1119.5168634843408	3	374.1795654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VHFCNPGFVT_	REV__ENSG00000138640|ENST00000264344|FAM13A	30.503639358989545	0.6307262373768582	2				NaN	NaN	0	NaN	8513	3757	12266
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12273	33.238	NaN	4828.7	30	0	1810.5	0.036	+			6640	AYVELVHHI	9	66	360.86589802241133	1079.575864667434	3	360.86572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AYVELVHHI_	ENSG00000101391|ENST00000346416|CDK5RAP1;ENST00000461710.5_1_20:31948117-31960625:-|nuORF;ENST00000482967.5_1_20:31946851-31989286:-|nuORF;nc|ENSG00000101391|Q96SZ6-2|CDK5RAP1;nc|ENSG00000101391|Q96SZ6-4|CDK5RAP1;nc|ENSG00000101391|Q96SZ6-5|CDK5RAP1;nc|ENSG00000101391|Q96SZ6-6|CDK5RAP1;nc|ENSG00000101391|Q96SZ6|CDK5RAP1	35.61828744233558	0.47037581924408073	2				NaN	NaN	0	NaN	8514	3757	12266
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12286	33.265	NaN	7520.9	30	0	913.22	0.214	+			47864	VSLGLAVSK	9	66	437.273784976677	872.533017020154	2	437.2735900878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSLGLAVSK_	ENSG00000018869|ENST00000586929|ZNF582;ENSG00000197302|ENST00000316491|KRBOX5;ENSG00000197566|ENST00000311331|ZNF624;ENST00000529943.6_1_16:31724760-31765604:+|nuORF;ENST00000534277.5_1_16:31724760-31767037:+|nuORF;ENST00000579983.1_1_17:16534952-16537956:-|nuORF;ZNF624|p.I325Nfs*9|1|0.21|ENSG00000197566|chr17:16623912-16623913|-/T|frameshift_variant;ZNF624|p.I325Sfs*167|1|0.46|ENSG00000197566|chr17:16623913-16623913|T/-|frameshift_variant;ZNF624|p.K498Nfs*74|1|0.49|ENSG00000197566|chr17:16623392-16623392|T/-|frameshift_variant;ZNF624|p.K666Nfs*130|1|0.46|ENSG00000197566|chr17:16622888-16622888|T/-|frameshift_variant;ZNF624|p.K787Ifs*14|1|0.11|ENSG00000197566|chr17:16622526-16622527|-/ATAAATGTAATGAA|frameshift_variant	83.6470233535746	0.08277643980271215	2				NaN	NaN	0	NaN	8524	3760	12285
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12287	33.269	NaN	3937.1	30	0	582.32	0.106	+			50272	WRICPALAV	9	67	514.7903045620444	1027.5660561908887	2	514.7904663085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WRICPALAV_	ALDH16A1|p.A347Gfs*5|1|0.36|ENSG00000161618|chr19:49462690-49462691|-/G|frameshift_variant;ALDH16A1|p.A347Lfs*155|1|0.37|ENSG00000161618|chr19:49462691-49462691|G/-|frameshift_variant;ALDH16A1|p.F409Sfs*93|1|0.42|ENSG00000161618|chr19:49464152-49464152|C/-|frameshift_variant;ALDH16A1|p.Y528Mfs*99|1|0.33|ENSG00000161618|chr19:49465745-49465745|C/-|frameshift_variant;ENSG00000161618|ENST00000293350|ALDH16A1;ENST00000599652.5_1_19:49956588-49965222:+|nuORF;nc|ENSG00000161618|Q8IZ83-2|ALDH16A1;nc|ENSG00000161618|Q8IZ83-3|ALDH16A1	38.80614096846853	0.43426287593479557	2				NaN	NaN	0	NaN	8525	3760	12285
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12288	33.271	NaN	4843.7	30	0	617.96	0.106				-1	ECLKNKNY	8	70	534.7603854425673	1067.5062179519346	2	535.25732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_EC(Carbamidomethyl (C))LKNKNY_	ENSG00000165246|ENST00000684976|NLGN4Y;nc|ENSG00000165246|Q8NFZ3-2|NLGN4Y;nc|ENSG00000165246|Q8NFZ3|NLGN4Y	35.200714571348534	0.6875396545722289	2				NaN	NaN	0	NaN	8526	3760	12285
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12289	33.273	NaN	5169.4	30	0	330.89	0.106			+	567	ADGQCKRYL	9	75	527.2597246338203	1052.5048963344404	2	527.2593383789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ADGQCKRYL_	REV__ENSG00000090863|ENST00000422840|GLG1;REV__nc|ENSG00000090863|Q92896-2|GLG1;REV__nc|ENSG00000090863|Q92896-3|GLG1	49.44154591367651	0.3095138337212152	2				NaN	NaN	0	NaN	8527	3760	12285
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12290	33.275	NaN	6078.9	30	0	572.74	0.106	+			46238	VEDDARGTVVL	11	72	587.309455897956	1172.604358862712	2	587.3091430664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VEDDARGTVVL_	ENSG00000139626|ENST00000267082|ITGB7;nc|ENSG00000139626|P26010-2|ITGB7	70.39856735676683	0.2324169829117963	2				NaN	NaN	0	NaN	8528	3760	12285
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12291	33.276	NaN	3935.2	30	0	525.3	0.106	+			41237	SVLGISTPK	9	57	451.27125318746994	900.5279534417399	2	451.27117919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVLGISTPK_	ENSG00000151327|ENST00000280987|FAM177A1;nc|ENSG00000151327|Q8N128|FAM177A1	80.45461616416974	0.09558281504443908	2				NaN	NaN	0	NaN	8529	3760	12285
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12292	33.278	NaN	4829.9	30	0	545.77	0.036			+	30717	QDHHYPNST	9	74	549.7337211609524	1097.4528893887048	2	549.7335815429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QDHHYPNST_	REV__CDK8|p.L359*|1|0.13|ENSG00000132964|chr13:26401309-26401309|T/-|frameshift_variant;REV__ENSG00000132964|ENST00000381527|CDK8;REV__nc|ENSG00000132964|P49336-2|CDK8	35.15202426646627	0.4747332964206883	2				NaN	NaN	0	NaN	8530	3760	12285
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12303	33.304	NaN	12123	30	0	1017.1	0.214	+			34868	RYTIVQQQI	9	82	574.8244171355076	1147.634281337815	2	574.8248901367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RYTIVQQQI_	ENSG00000130640|ENST00000252936|TUBGCP2;nc|ENSG00000130640|Q9BSJ2-3|TUBGCP2;nc|ENSG00000130640|Q9BSJ2-4|TUBGCP2	83.6470233535746	0.08277643980271215	2				NaN	NaN	0	NaN	8538	3763	12302
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12304	33.308	NaN	10034	30	0	3302.4	0.106			+	45987	VATITPKGPA	10	69	477.78449206514506	953.5544311970901	2	477.78424072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VATITPKGPA_	REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-10|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-13|TTN;REV__nc|ENSG00000155657|Q8WZ42-2|TTN;REV__nc|ENSG00000155657|Q8WZ42-3|TTN;REV__nc|ENSG00000155657|Q8WZ42-4|TTN;REV__nc|ENSG00000155657|Q8WZ42-5|TTN;REV__nc|ENSG00000155657|Q8WZ42-7|TTN;REV__nc|ENSG00000155657|Q8WZ42-8|TTN;REV__nc|ENSG00000155657|Q8WZ42-9|TTN;REV__nc|ENSG00000155657|Q8WZ42|TTN;REV__TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;REV__TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;REV__TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant	69.6276240434122	0.2803623802747859	2				NaN	NaN	0	NaN	8539	3763	12302
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12305	33.31	NaN	4842.3	30	0	2308.2	0.106				-1	 	0	45	327.2011627237667	326.1938862571667	1	327.2012939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8540	3763	12302
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12306	33.312	NaN	7135.8	30	0	578.89	0.106			+	42136	SYNIPGKFF	9	77	536.7756972688686	1071.5368416045371	2	536.774658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SYNIPGKFF_	REV__ENSG00000110400|ENST00000264025|NECTIN1;REV__nc|ENSG00000110400|Q15223-2|NECTIN1;REV__nc|ENSG00000110400|Q15223-3|NECTIN1	79.45101966838831	0.09992237243120712	2				NaN	NaN	0	NaN	8541	3763	12302
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12307	33.313	NaN	6952.8	30	0	543.66	0.106	+			9566	ELGGPPLLHG	10	71	495.2730775194388	988.5316021056776	2	495.2728271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ELGGPPLLHG_	ENST00000332674.9_2_10:111967418-111987950:+|nuORF	47.91560031466742	0.4762067885998563	2				NaN	NaN	0	NaN	8542	3763	12302
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12308	33.315	NaN	4921.9	30	0	653.6	0.106	+			5934	AVLHYGLAH	9	74	490.7688519673806	979.5231510015612	2	490.7688293457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AVLHYGLAH_	DNHD1|p.S3597Rfs*6|1|0.1|ENSG00000179532|chr11:6565718-6565719|-/AG|frameshift_variant;DNHD1|p.T4259Pfs*33|2|0.33|ENSG00000179532|chr11:6568772-6568772|C/-|frameshift_variant;ENSG00000179532|ENST00000254579|DNHD1	60.403631409065575	0.21025000616765316	2				NaN	NaN	0	NaN	8543	3763	12302
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12309	33.317	NaN	6108.2	30	0	911.9	0.037	+			1108	AELKMTGNCL	10	71	568.7758134822664	1135.5370740313326	2	568.7764892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_AELKMTGNC(Carbamidomethyl (C))L_	ENSG00000113460|ENST00000336767|BRIX1;ENST00000510960.5_1_5:34915843-34922894:+|nuORF	89.02883481214508	0.13663399911061233	2				NaN	NaN	0	NaN	8544	3763	12302
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12322	33.345	NaN	17402	30	0	6807.4	0.214	+			14824	GTLIDNQFK	9	82	518.2768633464276	1034.5391737596551	2	518.7770385742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTLIDNQFK_	ENSG00000018610|ENST00000644802|STEEP1;ENST00000469448.1_1_X:118673692-118676584:-|nuORF;nc|ENSG00000018610|Q9H5V9-2|STEEP1;nc|ENSG00000018610|Q9H5V9-3|STEEP1	58.22992032128504	0.22837015374068087	2				NaN	NaN	0	NaN	8554	3766	12321
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12323	33.349	NaN	25080	30	0	4405.9	0.106	+			41572	SVQGAALVQIK	11	85	557.3349031393384	1112.6552533454767	2	557.3355712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVQGAALVQIK_	chr16:1980544-1980641|439|11.94|0.64|4.22|-|ENST00000566005|NOXO1,NOXO1;chr16:1980728-1980939|449|16.41|0.86|4.26|-|ENST00000566005|NOXO1,NOXO1;ENSG00000196408|ENST00000356120|NOXO1;nc|ENSG00000196408|Q8NFA2-2|NOXO1;nc|ENSG00000196408|Q8NFA2-4|NOXO1;nc|ENSG00000196408|Q8NFA2|NOXO1	182.91823989275488	6.243756956516254E-06	2				NaN	NaN	0	NaN	8555	3766	12321
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12324	33.351	NaN	7667	30	0	1493.1	0.106				-1	ASMKKVKSL	9	66	336.534227507259	NaN	0	336.5342712402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_ASM(Oxidation (M))KKVKSL_	ENST00000369426.9_1_1:119575536-119588262:-|nuORF	25.57405402267927	0.3484490411150625	2				NaN	NaN	0	NaN	8556	3766	12321
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12325	33.352	NaN	15283	30	0	2432	0.106	+			8501	EATGQFHVY	9	82	526.246170060898	1050.4777871885958	2	526.24609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EATGQFHVY_	CEACAM6|p.I217Mfs*11|3|0.07|ENSG00000086548|chr19:41761474-41761475|-/G|frameshift_variant;chr19:41756959-41758061|166|203.57|0.0|24.28|+|2|CEACAM6,None|1;ENSG00000079385|ENST00000161559|CEACAM1;ENSG00000086548|ENST00000199764|CEACAM6;ENSG00000170956|ENST00000357396|CEACAM3;ENST00000344391.9_1_19:43023158-43032553:-|nuORF;ENST00000377806.7_1_19:43023094-43032607:-|nuORF;ENST00000403136.1_1_19:43025413-43032607:-|nuORF;nc|ENSG00000079385|P13688-10|CEACAM1;nc|ENSG00000079385|P13688-11|CEACAM1;nc|ENSG00000079385|P13688-2|CEACAM1;nc|ENSG00000079385|P13688-3|CEACAM1;nc|ENSG00000079385|P13688-4|CEACAM1;nc|ENSG00000079385|P13688-5|CEACAM1;nc|ENSG00000079385|P13688-6|CEACAM1;nc|ENSG00000079385|P13688-7|CEACAM1;nc|ENSG00000079385|P13688-8|CEACAM1;nc|ENSG00000079385|P13688-9|CEACAM1;nc|ENSG00000170956|P40198-2|CEACAM3;nc|ENSG00000170956|P40198-3|CEACAM3	94.00642277110589	0.05356993013874309	2				NaN	NaN	0	NaN	8557	3766	12321
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12326	33.354	NaN	8423.5	30	0	710.93	0.106			+	17340	IAIQLDLVQ	9	81	506.80530782249883	1011.5960627117977	2	506.805419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IAIQLDLVQ_	REV__ENSG00000141458|ENST00000269228|NPC1;REV__ENST00000540608.5_1_18:21119776-21166285:-|nuORF;REV__nc|ENSG00000141458|O15118-2|NPC1;REV__NPC1|p.C799Lfs*7|1|0.36|ENSG00000141458|chr18:23541186-23541187|-/A|frameshift_variant;REV__NPC1|p.E451K|1|0.26|ENSG00000141458|chr18:23554960-23554960|C/T|missense_variant;REV__NPC1|p.F1207Lfs*35|1|0.33|ENSG00000141458|chr18:23533488-23533488|A/-|frameshift_variant;REV__NPC1|p.G993Efs*4|1|0.22|ENSG00000141458|chr18:23538605-23538605|C/-|frameshift_variant	82.7504851949679	0.08565546331141553	2				NaN	NaN	0	NaN	8558	3766	12321
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12327	33.356	NaN	6067.2	30	0	507.18	0.106	+			21587	KPIESFNEY	9	79	563.7745844353512	1125.5346159375024	2	563.77490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KPIESFNEY_	ENSG00000085788|ENST00000397166|DDHD2;ENSG00000107651|ENST00000369075|SEC23IP;nc|ENSG00000085788|O94830-2|DDHD2	56.43379154798735	0.2433427591689151	2				NaN	NaN	0	NaN	8559	3766	12321
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12328	33.358	NaN	5056.1	30	0	320.53	0.035			+	1854	AILAFYSAY	9	74	509.7637847461515	1017.513016559103	2	509.7645568847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AILAFYSAY_	REV__ENSG00000117479|ENST00000236137|SLC19A2;REV__nc|ENSG00000117479|O60779-2|SLC19A2	60.29395666154354	0.21116425950210296	2				NaN	NaN	0	NaN	8560	3766	12321
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12340	33.384	NaN	92678	30	0	18023	0.204	+			41573	SVQGAALVQIK	11	93	557.3349031393384	1112.6552533454767	2	557.335205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVQGAALVQIK_	chr16:1980544-1980641|439|11.94|0.64|4.22|-|ENST00000566005|NOXO1,NOXO1;chr16:1980728-1980939|449|16.41|0.86|4.26|-|ENST00000566005|NOXO1,NOXO1;ENSG00000196408|ENST00000356120|NOXO1;nc|ENSG00000196408|Q8NFA2-2|NOXO1;nc|ENSG00000196408|Q8NFA2-4|NOXO1;nc|ENSG00000196408|Q8NFA2|NOXO1	206.35961359924863	4.721094791083222E-09	2				NaN	NaN	0	NaN	8569	3769	12339
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12341	33.387	NaN	47025	30	0	7376.3	0.106	+			14825	GTLIDNQFK	9	83	518.2768633464276	1034.5391737596551	2	518.2772216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTLIDNQFK_	ENSG00000018610|ENST00000644802|STEEP1;ENST00000469448.1_1_X:118673692-118676584:-|nuORF;nc|ENSG00000018610|Q9H5V9-2|STEEP1;nc|ENSG00000018610|Q9H5V9-3|STEEP1	138.06239232086	0.011389075116295402	2				NaN	NaN	0	NaN	8570	3769	12339
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12342	33.389	NaN	22433	30	0	3504.3	0.106	+			25138	LLSDKATSPL	10	86	522.800562545345	1043.5865721574899	2	522.8005981445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LLSDKATSPL_	ENSG00000130529|ENST00000252826|TRPM4;ENST00000596338.5_1_19:49685858-49692185:+|nuORF;nc|ENSG00000130529|Q8TD43-2|TRPM4;nc|ENSG00000130529|Q8TD43-3|TRPM4;TRPM4|p.F902Sfs*22|1|0.3|ENSG00000130529|chr19:49200356-49200356|T/-|frameshift_variant;TRPM4|p.W1124Gfs*5|1|0.32|ENSG00000130529|chr19:49210750-49210751|GT/-|frameshift_variant	89.02883481214508	0.13663399911061233	2				NaN	NaN	0	NaN	8571	3769	12339
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12343	33.391	NaN	8237.9	30	0	1505.5	0.106	+			38920	SSPSYENSL	9	69	492.21961646723264	982.4246800012653	2	492.2191467285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSPSYENSL_	ENSG00000140262|ENST00000333725|TCF12;nc|ENSG00000140262|Q99081-2|TCF12;nc|ENSG00000140262|Q99081-4|TCF12;nc|ENSG00000140262|Q99081|TCF12;TCF12|p.D536Afs*2|1|0.04|ENSG00000140262|chr15:57263207-57263208|-/C|frameshift_variant;TCF12|p.V474Mfs*18|1|0.15|ENSG00000140262|chr15:57262114-57262123|CTCTGTCAGT/-|frameshift_variant	112.41091882917199	0.026537921851008135	2				NaN	NaN	0	NaN	8572	3769	12339
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12344	33.393	NaN	8139.5	30	0	919.5	0.106			+	2192	ALNTLFFY	8	77	494.75937543976437	987.5041979463288	2	495.2639465332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ALNTLFFY_	REV__ENSG00000255223|ENST00000528616|OR5M11	35.200714571348534	0.6875396545722289	2				NaN	NaN	0	NaN	8573	3769	12339
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12345	33.395	NaN	9173.1	30	0	2837.8	0.106	+			16939	HPNLVVGGTY	10	78	528.7772952577841	1055.540037582368	2	528.77783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HPNLVVGGTY_	ENSG00000077380|ENST00000397119|DYNC1I2;ENSG00000158560|ENST00000447467|DYNC1I1;ENST00000435916.1_1_10:52025510-52026503:+|nuORF;ENST00000479806.1_1_2:172583261-172604396:+|nuORF;nc|ENSG00000077380|Q13409-2|DYNC1I2;nc|ENSG00000077380|Q13409-3|DYNC1I2;nc|ENSG00000077380|Q13409-5|DYNC1I2;nc|ENSG00000077380|Q13409-6|DYNC1I2;nc|ENSG00000077380|Q13409-7|DYNC1I2;nc|ENSG00000158560|O14576-3|DYNC1I1;nc|ENSG00000158560|O14576-4|DYNC1I1;nc|ENSG00000158560|O14576-5|DYNC1I1;nc|ENSG00000158560|O14576|DYNC1I1	63.42647028704847	0.33467688528802414	2				NaN	NaN	0	NaN	8574	3769	12339
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12346	33.396	NaN	3316.8	30	0	375.17	0.034	+			37126	SITLQVEAV	9	64	480.27395637074414	958.5333598082883	2	480.27435302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SITLQVEAV_	CEP192|p.D878Cfs*11|1|0.05|ENSG00000101639|chr18:13049422-13049423|-/TGTTCTTTGG|frameshift_variant;CEP192|p.F750Sfs*4|1|0.45|ENSG00000101639|chr18:13049038-13049039|TT/-|frameshift_variant;CEP192|p.K1891Nfs*8|1|0.19|ENSG00000101639|chr18:13087068-13087068|A/-|frameshift_variant;CEP192|p.N1674Kfs*6|1|0.25|ENSG00000101639|chr18:13069142-13069143|-/A|frameshift_variant;CEP192|p.R2464Kfs*5|1|0.13|ENSG00000101639|chr18:13116476-13116477|-/AAATCCA|frameshift_variant;CEP192|p.T788Qfs*40|1|0.32|ENSG00000101639|chr18:13049147-13049147|A/-|frameshift_variant;ENSG00000101639|ENST00000506447|CEP192;ENST00000513432.5_1_18:13030586-13057756:+|nuORF;nc|ENSG00000101639|Q8TEP8-1|CEP192;nc|ENSG00000101639|Q8TEP8-2|CEP192	49.536043120802724	0.308405419312776	2				NaN	NaN	0	NaN	8575	3769	12339
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12356	33.42	NaN	12106	30	0	3682.8	0.214	+			30661	QAVILDQKY	9	79	539.3010903880887	1076.5876278429773	2	539.30078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QAVILDQKY_	ENSG00000127831|ENST00000248444|VIL1	98.58198989935565	0.04066992115528678	2				NaN	NaN	0	NaN	8582	3772	12355
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12357	33.424	NaN	8033.3	30	0	864.55	0.106	+			32935	REANFTVSSM	10	69	571.2690186797454	1140.5234844262907	2	571.2691040039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_REANFTVSSM_	ENSG00000141543|ENST00000649764|EIF4A3;ENST00000575978.1_1_17:78111144-78112096:-|nuORF	96.0336014099291	0.09653029772959643	2				NaN	NaN	0	NaN	8583	3772	12355
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12358	33.426	NaN	8375.2	30	0	547.23	0.106	+			23419	LACGVAKVL	9	69	465.7756465310989	929.5367401289978	2	465.7754211425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LAC(Carbamidomethyl (C))GVAKVL_	ENSG00000265972|ENST00000582401|TXNIP	110.33723246496265	0.028653888678955353	2				NaN	NaN	0	NaN	8584	3772	12355
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12359	33.427	NaN	9442	30	0	1618.4	0.106			+	47315	VNVTAQRHSSR	11	73	627.8372966139261	1253.6600402946522	2	627.8378295898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VNVTAQRHSSR_	REV__CHD1|p.R233H|1|0.29|ENSG00000153922|chr5:98900972-98900972|C/T|missense_variant	46.45678178249821	0.46959456050452836	2				NaN	NaN	0	NaN	8585	3772	12355
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12360	33.429	NaN	8340.3	30	0	1235.3	0.106			+	29345	NYVEHEMY	8	77	542.723894790114	1083.4332366470278	2	542.7239990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NYVEHEMY_	REV__ENSG00000198483|ENST00000355594|ANKRD35	38.80614096846853	0.6637206697844082	2				NaN	NaN	0	NaN	8586	3772	12355
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12361	33.431	NaN	6041.7	30	0	1194.5	0.106			+	46088	VDAAELHGAI	10	69	498.261487728081	994.5084225229621	2	498.26116943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VDAAELHGAI_	REV__ENSG00000116783|ENST00000326637|TNNI3K;REV__nc|ENSG00000116783|Q59H18-1|TNNI3K;REV__nc|ENSG00000116783|Q59H18-3|TNNI3K;REV__nc|ENSG00000116783|Q59H18-4|TNNI3K	55.50420428727701	0.4067289358710215	2				NaN	NaN	0	NaN	8587	3772	12355
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12362	33.433	NaN	5234.9	30	0	524.42	0.034	+			48757	VTVRPGLAM	9	66	472.27405908159767	942.5335652299954	2	472.2736511230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VTVRPGLAM_	ENSG00000099974|ENST00000215770|DDTL;ENSG00000099977|ENST00000398344|DDT;ENST00000444947.2_1_22:24315904-24316657:-|nuORF;nc|ENSG00000099977|P30046-2|DDT	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	8588	3772	12355
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12376	33.462	NaN	32073	30	0	6557.9	0.214	+			15115	GTQSFVFQR	9	80	535.2751068519666	1068.535660770733	2	535.2752075195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTQSFVFQR_	ENSG00000147955|ENST00000277010|SIGMAR1;ENST00000378892.5_1_9:34637493-34637721:-|nuORF;ENST00000497006.1_1_9:34637208-34637655:-|nuORF;nc|ENSG00000147955|Q99720-3|SIGMAR1;nc|ENSG00000147955|Q99720-4|SIGMAR1	223.87817336536054	1.204045334314454E-12	2				NaN	NaN	0	NaN	8599	3775	12375
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12377	33.466	NaN	18501	30	0	3920.1	0.106	+			32739	RAPEVSGVLS	10	77	507.7825677704714	NaN	0	507.78277587890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RAPEVSGVLS_	ENST00000204566.6_1_15:65273230-65275885:-|nuORF	60.11826168202944	0.2333124524861241	2				NaN	NaN	0	NaN	8600	3775	12375
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12378	33.468	NaN	11891	30	0	3144.7	0.106	+			39250	STALVVPSLS	10	81	487.28146147661414	972.5483700200283	2	487.2814636230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STALVVPSLS_	ENST00000508941.5_1_5:35852875-35853016:+|nuORF	45.97224482568171	0.49411383603842696	2				NaN	NaN	0	NaN	8601	3775	12375
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12379	33.47	NaN	12219	30	0	814.62	0.106	+			4925	ATQMVRMILK	10	80	595.8408209108104	1189.6670888884207	2	595.84130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATQMVRMILK_	ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5	150.15188659993407	0.008468567113416427	2				NaN	NaN	0	NaN	8602	3775	12375
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12380	33.472	NaN	9701.1	30	0	2808.9	0.106	+			14990	GTMTGMLYK	9	73	501.2433266290003	1000.4721003248006	2	501.2434387207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTMTGMLYK_	ENSG00000178440|ENST00000651763|TIMM23B-AGAP6;ENSG00000204152|ENST00000651259|TIMM23B;ENSG00000265354|ENST00000580018|TIMM23;nc|ENSG00000204152|Q5SRD1-2|TIMM23B	95.81516180277367	0.04847050768394289	2				NaN	NaN	0	NaN	8603	3775	12375
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12381	33.474	NaN	11942	30	0	1195.4	0.039	+			20000	KEIETTGTYQL	11	83	641.8295255158314	1281.6444980984627	2	641.8301391601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KEIETTGTYQL_	ENSG00000007171|ENST00000313735|NOS2;nc|ENSG00000007171|P35228-2|NOS2;NOS2|p.A650Pfs*53|1|0.21|ENSG00000007171|chr17:27769063-27769063|C/-|frameshift_variant;NOS2|p.Y709*|1|0.33|ENSG00000007171|chr17:27767745-27767745|G/-|frameshift_variant	106.15719557519877	0.04795798448229554	2				NaN	NaN	0	NaN	8604	3775	12375
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12382	33.474	NaN	13700	30	0	1829.2	0.142	+			39497	STFNNDILSK	10	79	569.7904421754843	1137.5663314177684	2	569.7911987304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STFNNDILSK_	ENSG00000111912|ENST00000392477|NCOA7;nc|ENSG00000111912|Q8NI08-2|NCOA7;nc|ENSG00000111912|Q8NI08-5|NCOA7;nc|ENSG00000111912|Q8NI08-7|NCOA7	136.5150327860613	0.011683253857074924	2				NaN	NaN	0	NaN	8605	3775	12375
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12394	33.502	NaN	16330	30	0	1580.5	0.214	+			10726	FADQEVRSL	9	74	532.7724279466389	1063.5303029600777	2	532.7723999023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FADQEVRSL_	ENSG00000011405|ENST00000691414|PIK3C2A	114.85826248499774	0.024312442104607014	2				NaN	NaN	0	NaN	8614	3778	12393
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12395	33.506	NaN	12769	30	0	1510.5	0.106			+	8379	EAMLQEKIK	9	71	545.3012142438901	1088.58787555458	2	545.3008422851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EAMLQEKIK_	REV__ENSG00000160094|ENST00000539719|ZNF362;REV__ZNF362|p.G204Vfs*6|1|0.38|ENSG00000160094|chr1:33280380-33280380|G/-|frameshift_variant;REV__ZNF362|p.P171Lfs*39|1|0.4|ENSG00000160094|chr1:33280281-33280281|C/-|frameshift_variant	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	8615	3778	12393
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12396	33.508	NaN	11088	30	0	1322.9	0.106	+			15307	GTVDVTPFIKK	11	79	602.8507976592989	1203.6870423853977	2	602.8504638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTVDVTPFIKK_	ENSG00000198408|ENST00000361464|OGA;nc|ENSG00000198408|O60502-2|OGA;nc|ENSG00000198408|O60502-4|OGA	139.15298810987372	0.0005758918642827448	2				NaN	NaN	0	NaN	8616	3778	12393
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12397	33.51	NaN	9264.5	30	0	2487.7	0.106	+			27975	MVLQKGQKW	9	74	559.3138285053438	1116.6131040774876	2	559.314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MVLQKGQKW_	ENSG00000187288|ENST00000336832|CIDEC;nc|ENSG00000187288|Q96AQ7-2|CIDEC;nc|ENSG00000187288|Q96AQ7-4|CIDEC	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	8617	3778	12393
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12398	33.511	NaN	11716	30	0	2095.3	0.106	+			24859	LKEEHVAY	8	75	494.75937543976437	987.5041979463288	2	494.758056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LKEEHVAY_	sp|F5HEN8|HELI_HCMVMDNAreplicationhelicaseOS=Humancytomegalovirus(strainMerlin)OX=295027GN=HELIPE=3SV=1;sp|P16736|HELI_HCMVADNAreplicationhelicaseOS=Humancytomegalovirus(strainAD169)OX=10360GN=HELIPE=3SV=1	60.29395666154354	0.49887135096048313	2				NaN	NaN	0	NaN	8618	3778	12393
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12399	33.513	NaN	8447.8	30	0	1124.1	0.106			+	31611	QLYKTKQVDFF	11	86	708.8798545652859	1415.7451561973717	2	708.8775024414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QLYKTKQVDFF_	REV__ENSG00000109066|ENST00000335464|TMEM104;REV__nc|ENSG00000109066|Q8NE00-2|TMEM104;REV__TMEM104|p.F356Sfs*19|1|0.13|ENSG00000109066|chr17:74836259-74836259|T/-|frameshift_variant;REV__TMEM104|p.V362Sfs*13|1|0.42|ENSG00000109066|chr17:74836276-74836276|C/-|frameshift_variant	66.9202029811203	0.26168278700588427	2				NaN	NaN	0	NaN	8619	3778	12393
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12400	33.515	NaN	5467.8	30	0	823.22	0.034			+	27003	LYQIGKLS	8	66	461.2740176311471	920.5334823290942	2	461.2738037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LYQIGKLS_	REV__ENSG00000159708|ENST00000329956|LRRC36	96.19043198914106	0.25873003980794995	2				NaN	NaN	0	NaN	8620	3778	12393
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12414	33.545	NaN	13029	30	0	4043.7	0.214			+	2744	ARDPTTNLL	9	73	500.7748616054007	999.5351702776014	2	500.774658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ARDPTTNLL_	REV__ENSG00000163832|ENST00000296149|ELP6;REV__ENST00000483205.1_1_3:47551637-47555080:-|nuORF;REV__ENST00000485029.5_1_3:47545746-47555080:-|nuORF;REV__nc|ENSG00000163832|Q0PNE2-2|ELP6	71.87747018426188	0.13267044672804276	2				NaN	NaN	0	NaN	8631	3781	12413
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12415	33.548	NaN	15190	30	0	5180.6	0.106	+			35723	SDLQPYTEY	9	79	558.2488505550776	1114.4831481769552	2	558.2493286132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SDLQPYTEY_	ENSG00000042781|ENST00000307340|USH2A;nc|ENSG00000042781|O75445-3|USH2A;USH2A|p.E5096Gfs*82|1|0.44|ENSG00000042781|chr1:215634469-215634470|-/C|frameshift_variant;USH2A|p.T3753Lfs*31|1|0.37|ENSG00000042781|chr1:215758727-215758727|T/-|frameshift_variant;USH2A|p.W2964Gfs*10|1|0.21|ENSG00000042781|chr1:215845989-215845989|A/-|frameshift_variant	36.446750945000026	0.4619375763483977	2				NaN	NaN	0	NaN	8632	3781	12413
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12416	33.55	NaN	6328.7	30	0	577.62	0.106	+			42830	TECVKQICL	9	80	575.7817749855145	1149.548997037829	2	575.7838745117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_TEC(Carbamidomethyl (C))VKQIC(Carbamidomethyl (C))L_	ENSG00000169564|ENST00000303577|PCBP1	66.42927471994793	0.16001998865088202	2				NaN	NaN	0	NaN	8633	3781	12413
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12417	33.552	NaN	4878.7	30	0	812.15	0.106			+	27620	MPPSLRSPP	9	70	491.262694925998	980.510836918796	2	491.2623596191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MPPSLRSPP_	REV__ENSG00000162624|ENST00000356261|LHX8;REV__nc|ENSG00000162624|Q68G74|LHX8	37.15910966729921	0.4535818937225704	2				NaN	NaN	0	NaN	8634	3781	12413
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12418	33.554	NaN	6785.9	30	0	2775.7	0.106			+	47193	VLVRLHPTL	9	70	349.89326590824254	1046.6579683249277	3	349.8938293457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VLVRLHPTL_	REV__ENST00000311413.4_1_11:119207130-119207223:+|nuORF	31.529811441608018	0.5085848003137583	2				NaN	NaN	0	NaN	8635	3781	12413
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12419	33.556	NaN	5123.8	30	0	639.79	0.038			+	-1	LFIHCCTQL	9	70	596.2858458041451	1190.55713867509	2	596.2857666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Carbamidomethyl (C)	_LFIHC(Carbamidomethyl (C))C(Carbamidomethyl (C))TQL_	REV__ENSG00000020129|ENST00000373243|NCDN;REV__nc|ENSG00000020129|Q9UBB6-2|NCDN	76.7741389293348	0.11149722112137898	2				NaN	NaN	0	NaN	8636	3781	12413
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12420	33.556	NaN	5776.2	30	0	657.94	0.141			+	24540	LGLLKPPQP	9	65	481.80505901461436	NaN	0	481.8049621582031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LGLLKPPQP_	REV__AluSz6_dup43940|chr19:17814301-17814610:-|3.685936671004459|0.3287952390102888|3.49|483.0|18|3|anti-sense	88.64286706044652	0.04433224405096462	2				NaN	NaN	0	NaN	8637	3781	12413
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12433	33.586	NaN	12692	30	0	1513.4	0.214	+			20005	KEIGDIAGV	9	82	451.25292011772746	900.4912873022549	2	451.2527160644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEIGDIAGV_	ENSG00000137947|ENST00000370500|GTF2B	90.60085204095205	0.06317133949006545	2				NaN	NaN	0	NaN	8647	3784	12432
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12434	33.59	NaN	20986	30	0	1621.4	0.106			+	8280	EAIEQVSKI	9	83	508.7848947986395	1015.5552366640791	2	508.7846984863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EAIEQVSKI_	REV__DST|p.K5076Nfs*24|1|0.31|ENSG00000151914|chr6:56472218-56472218|T/-|frameshift_variant;REV__DST|p.L1539Ffs*11|1|0.39|ENSG00000151914|chr6:56611525-56611526|-/A|frameshift_variant;REV__DST|p.N1220Tfs*9|1|0.23|ENSG00000151914|chr6:56630354-56630354|T/-|frameshift_variant;REV__DST|p.T4428Nfs*23|1|0.12|ENSG00000151914|chr6:56497896-56497897|-/T|frameshift_variant;REV__ENSG00000151914|ENST00000680361|DST;REV__ENST00000521104.1_1_6:56504020-56557947:-|nuORF;REV__ENST00000523967.5_1_6:56504020-56716372:-|nuORF;REV__nc|ENSG00000151914|Q03001-13|DST;REV__nc|ENSG00000151914|Q03001-14|DST;REV__nc|ENSG00000151914|Q03001-3|DST;REV__nc|ENSG00000151914|Q03001-8|DST;REV__nc|ENSG00000151914|Q03001-9|DST;REV__nc|ENSG00000151914|Q03001|DST	127.46168284122857	0.016682644177004526	2				NaN	NaN	0	NaN	8648	3784	12432
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12435	33.592	NaN	7805.4	30	0	1291.3	0.106	+			7351	DCPAGKVL	8	64	430.2207051519355	858.426857370671	2	430.2204895019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_DC(Carbamidomethyl (C))PAGKVL_	ENST00000462787.5_1_3:160117521-160117608:+|nuORF	71.29570347882199	0.39610197767395533	2				NaN	NaN	0	NaN	8649	3784	12432
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12436	33.593	NaN	4838.5	30	0	580.22	0.106			+	-1	HLKAQCGAM	9	63	516.243409358301	1030.472265783402	2	516.2430419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_HLKAQC(Carbamidomethyl (C))GAM(Oxidation (M))_	REV__CELSR3|p.A2340Pfs*45|1|0.25|ENSG00000008300|chr3:48647952-48647952|C/-|frameshift_variant;REV__CELSR3|p.R2529Pfs*2|1|0.34|ENSG00000008300|chr3:48645746-48645747|-/G|frameshift_variant;REV__CELSR3|p.S1935Afs*4|1|0.38|ENSG00000008300|chr3:48651998-48651998|G/-|frameshift_variant;REV__ENSG00000008300|ENST00000164024|CELSR3;REV__nc|ENSG00000008300|Q9NYQ7-2|CELSR3	40.5726180659479	0.4135428067754104	2				NaN	NaN	0	NaN	8650	3784	12432
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12437	33.595	NaN	5176.2	30	0	905.2	0.106	+			16622	HGVDVDVSV	9	61	463.73255883051263	925.4505647278253	2	463.73211669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HGVDVDVSV_	ENSG00000114378|ENST00000395144|HYAL1;HYAL1|p.A315Gfs*69|1|0.23|ENSG00000114378|chr3:50301034-50301035|-/C|frameshift_variant;HYAL1|p.E45G|1|0.44|ENSG00000114378|chr3:50302823-50302823|T/C|missense_variant;nc|ENSG00000114378|Q12794-2|HYAL1;nc|ENSG00000114378|Q12794-4|HYAL1;nc|ENSG00000114378|Q12794-7|HYAL1	55.50420428727701	0.2510918378945873	2				NaN	NaN	0	NaN	8651	3784	12432
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12438	33.597	NaN	8494.9	30	0	1179.5	0.106			+	-1	TQITFKQQ	8	78	518.2768633464276	1034.5391737596551	2	519.7770385742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))TQITFKQQ_	REV__ENST00000473824.1_1_10:60124507-60124564:+|nuORF;REV__UBE2D1|p.P57Rfs*22|1|0.39|ENSG00000072401|chr10:58363653-58363653|T/-|frameshift_variant	34.172542307311794	0.6954784234644539	2				NaN	NaN	0	NaN	8652	3784	12432
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12439	33.599	NaN	6152.2	30	0	794.62	0.034	+			32806	RAVAPTMSL	9	66	473.2628676547838	944.5111823763676	2	473.26220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RAVAPTMSL_	ENSG00000144560|ENST00000430365|VGLL4;nc|ENSG00000144560|Q14135-2|VGLL4;nc|ENSG00000144560|Q14135-4|VGLL4;nc|ENSG00000144560|Q14135-5|VGLL4;nc|ENSG00000144560|Q14135-6|VGLL4;nc|ENSG00000144560|Q14135|VGLL4	71.87747018426188	0.13267044672804276	2				NaN	NaN	0	NaN	8653	3784	12432
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12452	33.626	NaN	31358	30	0	2585.3	0.214	+			5803	AVIDVGINR	9	79	478.7796482735469	955.5447436138938	2	478.77960205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVIDVGINR_	ENSG00000065911|ENST00000394053|MTHFD2;nc|ENSG00000065911|P13995-2|MTHFD2	95.81516180277367	0.04847050768394289	2				NaN	NaN	0	NaN	8663	3787	12451
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12453	33.63	NaN	19171	30	0	1378.3	0.106	+			8120	DYMKTTSNF	9	82	553.7446679585106	1105.4747829838211	2	553.7453002929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DYMKTTSNF_	ENSG00000165525|ENST00000298310|NEMF;nc|ENSG00000165525|O60524-3|NEMF;nc|ENSG00000165525|O60524-4|NEMF;NEMF|p.K641Rfs*9|1|0.15|ENSG00000165525|chr14:49802721-49802721|T/-|frameshift_variant;NEMF|p.M879*|1|0.12|ENSG00000165525|chr14:49789558-49789558|T/-|frameshift_variant;NEMF|p.M879Nfs*10|1|0.13|ENSG00000165525|chr14:49789557-49789558|-/T|frameshift_variant	101.45984612302182	0.0377122763612125	2				NaN	NaN	0	NaN	8664	3787	12451
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12454	33.632	NaN	22450	30	0	3879.1	0.106	+			14770	GTKYIFMVK	9	84	362.87181782139606	1085.5936240643882	3	362.8720397949219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTKYIFMVK_	ENSG00000101871|ENST00000317552|MID1;nc|ENSG00000101871|O15344-2|MID1	68.84614121027924	0.14577793175421136	2				NaN	NaN	0	NaN	8665	3787	12451
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12455	33.633	NaN	15985	30	0	1453.1	0.106	+			14771	GTKYIFMVK	9	100	543.8045704206284	1085.5945879080566	2	543.8045654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTKYIFMVK_	ENSG00000101871|ENST00000317552|MID1;nc|ENSG00000101871|O15344-2|MID1	93.5975768576971	0.05472259948179787	2				NaN	NaN	0	NaN	8666	3787	12451
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12456	33.635	NaN	8061.3	30	0	860.45	0.106	+			4012	ATCPQPWRY	9	73	589.77421866991	1177.53388440662	2	589.7750244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_ATC(Carbamidomethyl (C))PQPWRY_	ENC1|p.G499Vfs*26|1|0.12|ENSG00000171617|chr5:74634990-74634990|C/-|frameshift_variant;ENSG00000171617|ENST00000302351|ENC1;nc|ENSG00000171617|O14682-2|ENC1	71.87747018426188	0.13267044672804276	2				NaN	NaN	0	NaN	8667	3787	12451
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12457	33.637	NaN	6310	30	0	448.87	0.106	+			42663	TAVTVNQSL	9	73	466.7562496400648	931.4979463469297	2	466.75592041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TAVTVNQSL_	CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000425226.1_1_2:203706028-203706388:-|nuORF;ENST00000550170.5_1_12:53294858-53298765:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	129.42129120953632	0.01549634589885217	2				NaN	NaN	0	NaN	8668	3787	12451
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12458	33.639	NaN	6183.2	30	0	1328.4	0.036	+			11071	FETEPVSKL	9	77	525.2795032916192	NaN	0	525.2798461914062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FETEPVSKL_	ENSG00000198087|ENST00000359314|CD2AP	67.49366992349736	0.1173583512313808	2				NaN	NaN	0	NaN	8669	3787	12451
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12469	33.664	NaN	19534	30	0	3851.4	0.215	+			24250	LETLGQEKL	9	83	515.7930454329183	1029.5715379326366	2	515.7930908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LETLGQEKL_	CON__H-INV:HIT000292931;CON__P05787;CON__Q9H552;ENSG00000170421|ENST00000692008|KRT8;ENST00000409686.2_1_9:102067468-102068890:+|nuORF;ENST00000450021.1_1_2:183936291-183936849:-|nuORF;ENST00000515599.1_1_5:146086275-146086944:-|nuORF;ENST00000550170.5_1_12:53294858-53298765:-|nuORF;ENST00000562022.1_1_15:43093683-43094592:-|nuORF;ENST00000562317.1_1_16:78082520-78083381:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	138.06239232086	0.011389075116295402	2				NaN	NaN	0	NaN	8677	3790	12468
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12470	33.668	NaN	12729	30	0	2870.4	0.106	+			6515	AYAQEIQKL	9	83	532.2930866184199	1062.5716203036397	2	532.2929077148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AYAQEIQKL_	ENSG00000165030|ENST00000297689|NFIL3	49.536043120802724	0.308405419312776	2				NaN	NaN	0	NaN	8678	3790	12468
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12471	33.67	NaN	8564.7	30	0	721.5	0.106	+			12314	GDFKEISSV	9	74	491.24870099920275	980.4828490652055	2	491.2477722167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GDFKEISSV_	ENSG00000148773|ENST00000368654|MKI67;MKI67|p.K319Rfs*27|1|0.35|ENSG00000148773|chr10:128115454-128115454|C/-|frameshift_variant;MKI67|p.L2374*|1|0.28|ENSG00000148773|chr10:128104719-128104719|A/-|frameshift_variant;MKI67|p.L783Hfs*49|1|0.05|ENSG00000148773|chr10:128110447-128110448|-/TG|frameshift_variant;MKI67|p.L783Yfs*49|1|0.05|ENSG00000148773|chr10:128110446-128110447|-/GT|frameshift_variant;MKI67|p.R3036Yfs*27|1|0.04|ENSG00000148773|chr10:128102735-128102736|-/AAAATAA|frameshift_variant;MKI67|p.T672Nfs*4|1|0.25|ENSG00000148773|chr10:128112000-128112001|-/T|frameshift_variant	88.17693792209575	0.07000514020414955	2				NaN	NaN	0	NaN	8679	3790	12468
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12472	33.671	NaN	10881	30	0	2490.5	0.106	+			13200	GIATTFINK	9	76	482.7765914481901	963.5386299631803	2	482.7764892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GIATTFINK_	ENSG00000183258|ENST00000330503|DDX41;ENST00000503078.5_1_5:176938794-176943460:-|nuORF;ENST00000505081.5_1_5:176938794-176940626:-|nuORF;ENST00000507900.5_1_5:176938794-176942272:-|nuORF	107.00750918261382	0.032051501805654005	2				NaN	NaN	0	NaN	8680	3790	12468
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12473	33.673	NaN	5895.5	30	0	680.5	0.106	+			22533	KTQTIFLKY	9	70	571.3347353869589	1140.6549178407176	2	571.3346557617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KTQTIFLKY_	ENSG00000138119|ENST00000359263|MYOF;MYOF|p.G944Afs*24|1|0.38|ENSG00000138119|chr10:93363998-93363998|C/-|frameshift_variant;MYOF|p.S1621Lfs*14|1|0.18|ENSG00000138119|chr10:93329785-93329785|A/-|frameshift_variant;nc|ENSG00000138119|Q9NZM1-2|MYOF;nc|ENSG00000138119|Q9NZM1-3|MYOF;nc|ENSG00000138119|Q9NZM1-5|MYOF;nc|ENSG00000138119|Q9NZM1-6|MYOF	77.31757898189308	0.1091473830098891	2				NaN	NaN	0	NaN	8681	3790	12468
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12474	33.675	NaN	5512.9	30	0	717.02	0.106				-1	FMNIIANEI	9	69	540.7712116048058	1079.5278702764115	2	540.7705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_FM(Oxidation (M))NIIANEI_	ENSG00000266967|ENST00000427569|AARSD1;ENST00000474578.1_1_17:41102677-41107213:-|nuORF;nc|ENSG00000266967|Q9BTE6-2|AARSD1;nc|ENSG00000266967|Q9BTE6-3|AARSD1	56.72105179125745	0.24094814563026265	2				NaN	NaN	0	NaN	8682	3790	12468
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12475	33.677	NaN	3619.4	30	0	685.41	0.033			+	20831	KIGRLSAF	8	65	446.27411995086544	890.5336869685309	2	446.27423095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KIGRLSAF_	REV__ENSG00000177728|ENST00000314256|TMEM94;REV__ENST00000581085.5_1_17:73467944-73489290:+|nuORF;REV__ENST00000585105.5_1_17:73482215-73489290:+|nuORF;REV__KIAA0195|p.F220Sfs*31|1|0.18|ENSG00000177728|chr17:75488797-75488797|C/-|frameshift_variant;REV__KIAA0195|p.H1145Ifs*95|1|0.14|ENSG00000177728|chr17:75497800-75497800|C/-|frameshift_variant;REV__KIAA0195|p.S196P|1|0.05|ENSG00000177728|chr17:75488108-75488108|T/C|missense_variant;REV__KIAA0195|p.S895Pfs*13|5|0.32|ENSG00000177728|chr17:75494982-75494982|C/-|frameshift_variant;REV__nc|ENSG00000177728|Q12767-2|TMEM94;REV__nc|ENSG00000177728|Q12767-3|TMEM94	26.79610172149135	0.7524337208463756	2				NaN	NaN	0	NaN	8683	3790	12468
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12486	33.702	NaN	79994	30	0	7460.1	0.214	+			43061	TELLIRKL	8	102	493.3240659412349	984.6335789492698	2	493.3238220214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TELLIRKL_	ENSG00000132475|ENST00000254810|H3-3B;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000168148|ENST00000366696|H3-4;ENSG00000183598|ENST00000331491|H3C13;ENSG00000188375|ENST00000340398|H3-5;ENSG00000197153|ENST00000359303|H3C12;ENSG00000197409|ENST00000356476|H3C4;ENSG00000203811|ENST00000369158|H3C14;ENSG00000203852|ENST00000403683|H3C15;ENSG00000273983|ENST00000614378|H3C8;ENSG00000274750|ENST00000614911|H3C6;ENSG00000275379|ENST00000616365|H3C11;ENSG00000275714|ENST00000613854|H3C1;ENSG00000277775|ENST00000618052|H3C7;ENSG00000278828|ENST00000685041|H3C10;ENST00000401004.2_1:120904811-120905087:+|nuORF;ENST00000497682.1_1_3:109128527-109128830:-|nuORF;ENST00000586518.1_1_17:73774674-73775034:-|nuORF;nc|ENSG00000273213|Q5TEC6|H3-7	113.41158876095287	0.24327961457765637	2				NaN	NaN	0	NaN	8691	3793	12485
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12487	33.706	NaN	63293	30	0	22742	0.106	+			43062	TELLIRKL	8	102	329.2181442337728	984.6326033015184	3	329.2182922363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TELLIRKL_	ENSG00000132475|ENST00000254810|H3-3B;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000168148|ENST00000366696|H3-4;ENSG00000183598|ENST00000331491|H3C13;ENSG00000188375|ENST00000340398|H3-5;ENSG00000197153|ENST00000359303|H3C12;ENSG00000197409|ENST00000356476|H3C4;ENSG00000203811|ENST00000369158|H3C14;ENSG00000203852|ENST00000403683|H3C15;ENSG00000273983|ENST00000614378|H3C8;ENSG00000274750|ENST00000614911|H3C6;ENSG00000275379|ENST00000616365|H3C11;ENSG00000275714|ENST00000613854|H3C1;ENSG00000277775|ENST00000618052|H3C7;ENSG00000278828|ENST00000685041|H3C10;ENST00000401004.2_1:120904811-120905087:+|nuORF;ENST00000497682.1_1_3:109128527-109128830:-|nuORF;ENST00000586518.1_1_17:73774674-73775034:-|nuORF;nc|ENSG00000273213|Q5TEC6|H3-7	42.47446043378293	0.6409579893742323	2				NaN	NaN	0	NaN	8692	3793	12485
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12488	33.708	NaN	11644	30	0	1354.5	0.106			+	-1	AGPGPCRLS	9	73	478.73493272779973	955.4553125223995	2	478.7349853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))AGPGPC(Carbamidomethyl (C))RLS_	REV__ENST00000393913.7_1_2:75720375-75720411:-|nuORF	45.9519527083369	0.35044536499095585	2				NaN	NaN	0	NaN	8693	3793	12485
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12489	33.71	NaN	13100	30	0	2732.7	0.106	+			16000	HAPFTATSL	9	71	472.74570195971137	943.4768509862228	2	472.74542236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HAPFTATSL_	ENSG00000128731|ENST00000261609|HERC2;ENST00000424611.5_1_15:20644728-20658919:-|nuORF;ENST00000428453.5_1_15:20588586-20667676:-|nuORF;ENST00000430598.5_1_15:20613931-20667676:-|nuORF;ENST00000437318.5_1_15:20588586-20648641:-|nuORF;ENST00000529624.5_3_15:28877823-28916776:+|nuORF;ENST00000530420.5_1_15:28896588-28900598:+|nuORF;HERC2|p.G2202Afs*8|1|0.2|ENSG00000128731|chr15:28213923-28213923|C/-|frameshift_variant;nc|ENSG00000290376|Q9BVR0|HERC2P3	51.33545320467046	0.2872990594074956	2				NaN	NaN	0	NaN	8694	3793	12485
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12490	33.711	NaN	7291.9	30	0	1789.2	0.106	+			2650	AQLIILEHA	9	66	336.534227507259	NaN	0	336.5342102050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AQLIILEHA_	ENSG00000067141|ENST00000261908|NEO1;nc|ENSG00000067141|Q92859-2|NEO1;nc|ENSG00000067141|Q92859-3|NEO1;nc|ENSG00000067141|Q92859-4|NEO1	30.503639358989545	0.3235605894931338	2				NaN	NaN	0	NaN	8695	3793	12485
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12491	33.713	NaN	41724	30	0	12589	0.106	+			6669	AYVHMVTHF	9	87	368.8481767268375	1103.5227007807125	3	368.8485107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AYVHMVTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	52.29916861842294	0.2778091507991977	2				NaN	NaN	0	NaN	8696	3793	12485
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12492	33.715	NaN	9998.4	30	0	695.4	0.035	+			7141	DACTLAEKY	9	87	507.2330369284881	1012.4515209237762	2	507.73223876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DACTLAEKY_	ENSG00000146955|ENST00000537763|RAB19;nc|ENSG00000146955|A4D1S5-2|RAB19	85.16082228582465	0.07850854922700509	2				NaN	NaN	0	NaN	8697	3793	12485
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12507	33.746	NaN	265460	30	0	95027	0.117	+			43063	TELLIRKL	8	100	329.2181442337728	984.6326033015184	3	329.2182922363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TELLIRKL_	ENSG00000132475|ENST00000254810|H3-3B;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000168148|ENST00000366696|H3-4;ENSG00000183598|ENST00000331491|H3C13;ENSG00000188375|ENST00000340398|H3-5;ENSG00000197153|ENST00000359303|H3C12;ENSG00000197409|ENST00000356476|H3C4;ENSG00000203811|ENST00000369158|H3C14;ENSG00000203852|ENST00000403683|H3C15;ENSG00000273983|ENST00000614378|H3C8;ENSG00000274750|ENST00000614911|H3C6;ENSG00000275379|ENST00000616365|H3C11;ENSG00000275714|ENST00000613854|H3C1;ENSG00000277775|ENST00000618052|H3C7;ENSG00000278828|ENST00000685041|H3C10;ENST00000401004.2_1:120904811-120905087:+|nuORF;ENST00000497682.1_1_3:109128527-109128830:-|nuORF;ENST00000586518.1_1_17:73774674-73775034:-|nuORF;nc|ENSG00000273213|Q5TEC6|H3-7	50.0245360154114	0.5941082100236891	2				NaN	NaN	0	NaN	8709	3796	12506
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12508	33.748	NaN	141080	30	0	20405	0.082	+			29165	NVIRDAVTY	9	85	525.7827594669932	1049.5509660007863	2	525.7828369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NVIRDAVTY_	ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2	104.01359247289065	0.03510646158778409	2				NaN	NaN	0	NaN	8710	3796	12506
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12509	33.749	NaN	183220	30	0	15751	0.106	+			6672	AYVHMVTHF	9	114	552.7682709412602	1103.5219889493203	2	552.7686767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AYVHMVTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	217.60252203727623	2.2789423504978728E-08	2				NaN	NaN	0	NaN	8711	3796	12506
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12510	33.751	NaN	36936	30	0	4797.7	0.106	+			44314	TSFDGSLIQK	10	84	548.2889328165929	1094.5633126999858	2	548.2882690429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TSFDGSLIQK_	ENSG00000177485|ENST00000557385|ZBTB33	190.62248201133156	0.00017197548059753575	2				NaN	NaN	0	NaN	8712	3796	12506
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12511	33.753	NaN	33397	30	0	9472.5	0.106	+			40349	STTQVVGILK	10	88	523.3164822750341	1044.6184116168681	2	523.3165893554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STTQVVGILK_	ENSG00000198898|ENST00000361183|CAPZA2;ENST00000426421.5_1_7:116544367-116557918:+|nuORF	160.8219353732433	0.006574023344242491	2				NaN	NaN	0	NaN	8713	3796	12506
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12512	33.755	NaN	16793	30	0	3786.3	0.106				-1	MCEFDPVIM	9	90	558.7244991138333	1115.4344452944665	2	558.7247314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Oxidation (M)	_M(Oxidation (M))CEFDPVIM(Oxidation (M))_	chr15:53523322-53540662|232|17.27|0.17|6.68|-|0|TE_info:L1PA2,L1PA2_dup4399,L1,LINE,donor,+,53540662,53546677|WDR72,None|81;L1PA3_dup1321|chr2:173527290-173533317:-|1.892281258594111|0.2637255971055219|2.84|482.0|344|3|anti-sense	50.0245360154114	0.3026755932229825	2				NaN	NaN	0	NaN	8714	3796	12506
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12513	33.756	NaN	5920.3	30	0	646.1	0.106	+			7142	DACTLAEKY	9	74	507.2330369284881	1012.4515209237762	2	507.23394775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DACTLAEKY_	ENSG00000146955|ENST00000537763|RAB19;nc|ENSG00000146955|A4D1S5-2|RAB19	98.62937762414208	0.04060045538121712	2				NaN	NaN	0	NaN	8715	3796	12506
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12514	33.758	NaN	11507	30	0	6676.3	0.033	+			21506	KNLVKVAL	8	72	442.7996338665056	NaN	0	442.7999267578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_KNLVKVAL_	ENSG00000185361|ENST00000327473|TNFAIP8L1	60.29395666154354	1.7418937515398478	2				NaN	NaN	0	NaN	8716	3796	12506
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12529	33.788	NaN	110320	30	0	15339	0.172	+			46556	VFIDKQTNL	9	82	539.3008472501654	1076.5871415671306	2	539.3006591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VFIDKQTNL_	ENSG00000048740|ENST00000633077|CELF2;ENSG00000149187|ENST00000687097|CELF1;nc|ENSG00000048740|O95319-2|CELF2;nc|ENSG00000048740|O95319-3|CELF2;nc|ENSG00000048740|O95319-4|CELF2;nc|ENSG00000048740|O95319-5|CELF2;nc|ENSG00000048740|O95319|CELF2;nc|ENSG00000149187|Q92879-2|CELF1;nc|ENSG00000149187|Q92879-3|CELF1;nc|ENSG00000149187|Q92879-4|CELF1;nc|ENSG00000149187|Q92879-5|CELF1;nc|ENSG00000149187|Q92879-6|CELF1;nc|ENSG00000149187|Q92879|CELF1	155.5846463517096	0.005567437401040498	2				NaN	NaN	0	NaN	8728	3799	12528
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12530	33.791	NaN	24806	30	0	3994.2	0.106			+	33236	RGAAFMAF	8	80	435.71814625963043	869.4217395860609	2	435.71771240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RGAAFMAF_	REV__tr|U7SXB4|U7SXB4_FUSNUTransketolaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00935PE=4SV=1	44.53106598305862	0.628196326904373	2				NaN	NaN	0	NaN	8729	3799	12528
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12531	33.793	NaN	68311	30	0	11496	0.106	+			51481	YVHMVTHF	8	96	517.2497274616601	1032.48490199012	2	517.2501831054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YVHMVTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	123.9887779854562	0.22885264854939885	2				NaN	NaN	0	NaN	8730	3799	12528
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12532	33.795	NaN	6297.2	30	0	1257.3	0.031				-1	 	0	65	378.27857521465614	754.5425974961123	2	378.2781066894531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8731	3799	12528
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12539	33.81	NaN	63380	30	0	16886	0.214	+			5211	ATTSVITIVK	10	104	516.8187237855374	1031.6228946378747	2	516.8191528320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATTSVITIVK_	ENSG00000198517|ENST00000343242|MAFK	70.39856735676683	0.27406383984062843	2				NaN	NaN	0	NaN	8735	3802	12538
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12540	33.814	NaN	4821.4	30	0	420.99	0.106	+			12932	GESQPVKMF	9	70	511.752669314856	1021.490785696512	2	511.7525329589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GESQPVKMF_	CLTC-CEP95|1|fusion;CLTC|p.A1374*|1|0.05|ENSG00000141367|chr17:59683464-59683465|-/TA|frameshift_variant;CLTC|p.D632Yfs*7|1|0.15|ENSG00000141367|chr17:59666589-59666590|-/TTACA|frameshift_variant;ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000141367|Q00610-2|CLTC	71.87747018426188	0.13267044672804276	2				NaN	NaN	0	NaN	8736	3802	12538
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12541	33.816	NaN	14066	30	0	1120.7	0.106	+			36460	SEVMGEPHL	9	78	499.7345078589805	997.4544627847611	2	499.7346496582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEVMGEPHL_	ENSG00000132963|ENST00000380842|POMP	60.97194046774394	0.20551255781574032	2				NaN	NaN	0	NaN	8737	3802	12538
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12542	33.818	NaN	5758.1	30	0	1015.4	0.106			+	-1	KLLMDFEY	8	62	358.8436533237001	1073.5091305713004	3	358.8436279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_KLLM(Oxidation (M))DFEY_	REV__tr|U7SKT2|U7SKT2_FUSNUDNAligaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=ligAPE=3SV=1	24.20275056022122	0.7724576178584145	2				NaN	NaN	0	NaN	8738	3802	12538
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12543	33.819	NaN	5512.4	30	0	632.68	0.106	+			35904	SEFKNITV	8	66	469.25340294095446	NaN	0	469.25335693359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SEFKNITV_	ENSG00000144028|ENST00000323853|SNRNP200	79.71258880314673	1.7418937515398478	2				NaN	NaN	0	NaN	8739	3802	12538
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12544	33.821	NaN	3842.9	30	0	298.06	0.106	+			50583	YCWLCRALI	9	66	570.7897534196517	1139.5649539061033	2	570.7896118164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YCWLCRALI_	ENSG00000168878|ENST00000519937|SFTPB	35.200714571348534	0.47427825964483533	2				NaN	NaN	0	NaN	8740	3802	12538
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12545	33.823	NaN	5774.7	30	0	582.44	0.036			+	27761	MRDYLIDY	8	68	544.7569172603022	1087.4992815874043	2	544.756591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MRDYLIDY_	REV__tr|U7SJG6|U7SJG6_FUSNURCKC-terminaldomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02133PE=4SV=1	33.51558372728122	0.7005509609380386	2				NaN	NaN	0	NaN	8741	3802	12538
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12556	33.848	NaN	18313	30	0	2044.9	0.214	+			15539	GVDSSIFQNPK	11	78	596.3038175782651	1190.5930822233302	2	596.3038330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVDSSIFQNPK_	ENSG00000138303|ENST00000672957|ASCC1;nc|ENSG00000138303|Q8N9N2|ASCC1	178.54760496737404	9.14451565508135E-06	2				NaN	NaN	0	NaN	8749	3805	12555
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12557	33.852	NaN	5249.6	30	0	690.81	0.106	+			2124	ALHYQLAQI	9	80	528.7938939847613	NaN	0	528.7932739257812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ALHYQLAQI_	ENSG00000083457|ENST00000263087|ITGAE;ITGAE|p.A480Lfs*87|1|0.48|ENSG00000083457|chr17:3753872-3753872|C/-|frameshift_variant;ITGAE|p.I909Lfs*19|1|0.09|ENSG00000083457|chr17:3732398-3732398|C/-|frameshift_variant;ITGAE|p.L601Pfs*8|1|0.31|ENSG00000083457|chr17:3751741-3751742|-/G|frameshift_variant	69.6276240434122	0.10825701912424071	2				NaN	NaN	0	NaN	8750	3805	12555
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12558	33.854	NaN	3715.3	30	0	361.67	0.106				-1	MLDVIERL	8	62	502.77365743736044	1003.5327619415209	2	502.7742004394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))LDVIERL_	ENSG00000117501|ENST00000367759|MROH9;MROH9|p.L824Cfs*10|1|0.03|ENSG00000117501|chr1:171064224-171064224|T/-|frameshift_variant	68.78682469695295	0.41700713582915416	2				NaN	NaN	0	NaN	8751	3805	12555
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12559	33.856	NaN	4361.2	30	0	293.45	0.106				-1	VVFCCCCCCFT	11	71	672.7222117405393	1343.4298705478784	2	672.7217407226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_VVFCCCC(Carbamidomethyl (C))C(Carbamidomethyl (C))CFT_	ENST00000318348.8_1_12:110289098-110289272:-|nuORF	9.705651100619752	0.8250432705525658	2				NaN	NaN	0	NaN	8752	3805	12555
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12560	33.857	NaN	3617.8	30	0	354.86	0.106			+	30524	QAICIFFERK	10	75	627.8372966139261	1253.6600402946522	2	627.8372192382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QAICIFFERK_	REV__ENSG00000143515|ENST00000368489|ATP8B2;REV__nc|ENSG00000143515|P98198-3|ATP8B2;REV__nc|ENSG00000143515|P98198|ATP8B2	37.81151784470057	0.569310847604193	2				NaN	NaN	0	NaN	8753	3805	12555
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12561	33.859	NaN	3932	30	0	347.63	0.037	+			16124	HDYCFHCK	8	64	583.7275140363527	1165.4404751395052	2	583.7274780273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Carbamidomethyl (C)	_HDYC(Carbamidomethyl (C))FHC(Carbamidomethyl (C))K_	ENSG00000022267|ENST00000370683|FHL1;nc|ENSG00000022267|Q13642-1|FHL1;nc|ENSG00000022267|Q13642-4|FHL1	40.5726180659479	0.6527593143185008	2				NaN	NaN	0	NaN	8754	3805	12555
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12574	33.886	NaN	6875.1	30	0	713.2	0.214	+			13039	GEVVKELSV	9	73	480.27407134432025	958.5335897554405	2	480.27423095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEVVKELSV_	ENSG00000050405|ENST00000341247|LIMA1;nc|ENSG00000050405|Q9UHB6-2|LIMA1;nc|ENSG00000050405|Q9UHB6-3|LIMA1;nc|ENSG00000050405|Q9UHB6-4|LIMA1;nc|ENSG00000050405|Q9UHB6-5|LIMA1	70.8162118820467	0.13725933411854815	2				NaN	NaN	0	NaN	8764	3808	12573
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12575	33.89	NaN	6294.5	30	0	982.47	0.106			+	-1	EAQQVCLY	8	73	505.73435621216066	1009.4541594911213	2	505.7342529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_EAQQVC(Carbamidomethyl (C))LY_	REV__ENSG00000042062|ENST00000327979|RIPOR3;REV__ENST00000462493.1_1_20:49214115-49253138:-|nuORF;REV__nc|ENSG00000042062|Q96MK2-2|RIPOR3;REV__nc|ENSG00000042062|Q96MK2|RIPOR3	38.80614096846853	0.6637206697844082	2				NaN	NaN	0	NaN	8765	3808	12573
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12576	33.892	NaN	7233.8	30	0	775.75	0.106	+			43853	TLVSDFKQQ	9	81	533.2818202799765	1064.549087626753	2	533.7840576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TLVSDFKQQ_	ENSG00000206562|ENST00000383790|METTL6;METTL6|p.F222Lfs*19|1|0.19|ENSG00000206562|chr3:15414028-15414028|A/-|frameshift_variant;METTL6|p.Y49Tfs*22|1|0.26|ENSG00000206562|chr3:15426367-15426367|A/-|frameshift_variant;nc|ENSG00000206562|Q8TCB7-2|METTL6	49.44154591367651	0.3095138337212152	2				NaN	NaN	0	NaN	8766	3808	12573
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12577	33.894	NaN	7870.4	30	0	1889.7	0.106			+	708	AEARSHNAME	10	71	558.2488505550776	1114.4831481769552	2	558.248291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEARSHNAME_	REV__CON__Q9DCV7	39.252832667884924	0.5560298534376815	2				NaN	NaN	0	NaN	8767	3808	12573
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12578	33.896	NaN	8281.4	30	0	995.02	0.106	+			17770	IESNHPIVL	9	69	511.28738288521487	1020.5602128372298	2	511.2864685058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IESNHPIVL_	ENSG00000065150|ENST00000651721|IPO5;ENST00000493122.1_1_13:98671845-98673393:+|nuORF;nc|ENSG00000065150|O00410-2|IPO5;nc|ENSG00000065150|O00410-3|IPO5	71.87747018426188	0.13267044672804276	2				NaN	NaN	0	NaN	8768	3808	12573
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12579	33.897	NaN	4913.1	30	0	909.3	0.106				-1	LCCLMQLIT	9	74	555.7707305500123	1109.5269081668246	2	555.7716064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),Oxidation (M)	_LCC(Carbamidomethyl (C))LM(Oxidation (M))QLIT_	ENSG00000141627|ENST00000675505|DYM;ENST00000418472.6_1_18:46856042-46938282:-|nuORF;nc|ENSG00000141627|Q7RTS9|DYM	53.351449002276354	0.2690372970092375	2				NaN	NaN	0	NaN	8769	3808	12573
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12580	33.899	NaN	3812.2	30	0	356.36	0.034			+	25952	LSIGCYLLG	9	62	469.7528583754388	937.4911638176776	2	469.7503967285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSIGCYLLG_	REV__STARD4|p.S131Y|1|0.27|ENSG00000164211|chr5:111501007-111501007|G/T|missense_variant	50.0245360154114	0.3026755932229825	2				NaN	NaN	0	NaN	8770	3808	12573
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12592	33.924	NaN	22434	30	0	4560.6	0.214	+			36869	SIFSKFTSK	9	86	522.790003548571	1043.565454163942	2	522.7899169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIFSKFTSK_	ENSG00000072518|ENST00000402010|MARK2;nc|ENSG00000072518|Q7KZI7-10|MARK2;nc|ENSG00000072518|Q7KZI7-11|MARK2;nc|ENSG00000072518|Q7KZI7-12|MARK2;nc|ENSG00000072518|Q7KZI7-13|MARK2;nc|ENSG00000072518|Q7KZI7-14|MARK2;nc|ENSG00000072518|Q7KZI7-15|MARK2;nc|ENSG00000072518|Q7KZI7-16|MARK2;nc|ENSG00000072518|Q7KZI7-2|MARK2;nc|ENSG00000072518|Q7KZI7-3|MARK2;nc|ENSG00000072518|Q7KZI7-4|MARK2;nc|ENSG00000072518|Q7KZI7-5|MARK2;nc|ENSG00000072518|Q7KZI7-6|MARK2;nc|ENSG00000072518|Q7KZI7-7|MARK2;nc|ENSG00000072518|Q7KZI7-8|MARK2;nc|ENSG00000072518|Q7KZI7-9|MARK2	106.88024417677582	0.032181361622142884	2				NaN	NaN	0	NaN	8779	3811	12591
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12593	33.928	NaN	29824	30	0	9154.2	0.106	+			4634	ATLPPITVTSK	11	81	564.3372355618601	1126.65991819052	2	564.33740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATLPPITVTSK_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	93.44185321454538	0.08468467990978058	2				NaN	NaN	0	NaN	8780	3811	12591
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12594	33.93	NaN	10659	30	0	1291.5	0.106	+			5965	AVLLPQPPK	9	79	481.80505901461436	NaN	0	481.80499267578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVLLPQPPK_	AluSp_dup17171|chr6:42956085-42956345:+|2.9082291479174875|0.2092895351215914|3.8|479.0|11|1|anti-sense;nc|ENSG00000153094|O43521-12|BCL2L11	63.30626980617807	0.13521764763214936	2				NaN	NaN	0	NaN	8781	3811	12591
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12595	33.932	NaN	9511.8	30	0	5345.4	0.106				-1	VQVLKEWT	8	70	348.862151686282	1043.564625659046	3	348.862060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))VQVLKEWT_	ENST00000446327.6_2_2:38972252-38972300:-|nuORF	33.51558372728122	0.7005509609380386	2				NaN	NaN	0	NaN	8782	3811	12591
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12596	33.933	NaN	9605.2	30	0	3377.6	0.106	+			32618	QYNPKFQTL	9	83	569.7983476118628	1137.5821422905256	2	569.7984619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QYNPKFQTL_	ENSG00000116580|ENST00000368331|GON4L;ENSG00000163374|ENST00000355499|YY1AP1;ENST00000436865.5_1_1:155629450-155649007:-|nuORF;ENST00000496324.5_1_1:155642327-155650230:-|nuORF;GON4L|p.E1831Rfs*8|1|0.18|ENSG00000116580|chr1:155756984-155756985|-/T|frameshift_variant;GON4L|p.P1077Lfs*24|1|0.34|ENSG00000116580|chr1:155766243-155766243|G/-|frameshift_variant;nc|ENSG00000116580|Q3T8J9-2|GON4L;nc|ENSG00000116580|Q3T8J9-3|GON4L;nc|ENSG00000163374|Q9H869-3|YY1AP1;nc|ENSG00000163374|Q9H869-4|YY1AP1;nc|ENSG00000163374|Q9H869-5|YY1AP1;nc|ENSG00000163374|Q9H869-6|YY1AP1;nc|ENSG00000163374|Q9H869-8|YY1AP1;nc|ENSG00000163374|Q9H869-9|YY1AP1;nc|ENSG00000163374|Q9H869|YY1AP1	115.49404669440601	0.023927554121326553	2				NaN	NaN	0	NaN	8783	3811	12591
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12597	33.935	NaN	5498	30	0	574.78	0.106	+			26505	LTNDAKFKE	9	80	533.2818202799765	1064.549087626753	2	533.7835083007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LTNDAKFKE_	ENSG00000224960|ENST00000412172|PPP4R3C;nc|ENSG00000224960|Q6ZMV5-2|PPP4R3C	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	8784	3811	12591
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12598	33.937	NaN	4732.6	30	0	1347.6	0.034	+			17261	HYPLNTVT	8	68	472.74570195971137	943.4768509862228	2	472.74542236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HYPLNTVT_	ENSG00000079308|ENST00000682258|TNS1;ENST00000490566.1_1_2:218669184-218678576:-|nuORF;nc|ENSG00000079308|Q9HBL0-1|TNS1	38.80614096846853	0.6637206697844082	2				NaN	NaN	0	NaN	8785	3811	12591
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12611	33.965	NaN	120140	30	0	18182	0.201	+			6581	AYLHTTTTF	9	95	527.7638945418813	1053.5132361505625	2	527.7640380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AYLHTTTTF_	ABCC3|p.L968Afs*31|1|0.33|ENSG00000108846|chr17:50675920-50675921|-/G|frameshift_variant;ENSG00000108846|ENST00000285238|ABCC3;ENST00000502426.5_1_17:48736553-48755440:+|nuORF;nc|ENSG00000108846|O15438-2|ABCC3;nc|ENSG00000108846|O15438-4|ABCC3;nc|ENSG00000108846|O15438-5|ABCC3	167.82442114527325	0.0031382784359891723	2				NaN	NaN	0	NaN	8795	3814	12610
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12612	33.968	NaN	12037	30	0	2840.9	0.106	+			29959	PNIKALIEM	9	68	514.7944224396659	1027.5742919461318	2	514.794189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PNIKALIEM_	tr|U7T5X4|U7T5X4_FUSNUDNApolymeraseIIIsubunitbetaOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00119PE=4SV=1	32.81241826257853	0.4965981579233955	2				NaN	NaN	0	NaN	8796	3814	12610
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12613	33.97	NaN	7419.2	30	0	679.54	0.106	+			17802	IEVENKEVL	9	69	536.797687638216	1071.5808223432318	2	536.7980346679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IEVENKEVL_	ENSG00000173193|ENST00000474629|PARP14;nc|ENSG00000173193|Q460N5-1|PARP14;nc|ENSG00000173193|Q460N5-3|PARP14;nc|ENSG00000173193|Q460N5-4|PARP14;PARP14|p.N1416Efs*19|1|0.2|ENSG00000173193|chr3:122718388-122718389|-/A|frameshift_variant	102.0615471778698	0.03709830720253279	2				NaN	NaN	0	NaN	8797	3814	12610
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12614	33.972	NaN	7634.7	30	0	935.94	0.106	+			12449	GEDEPLHAL	9	68	490.7381630049495	979.461773076699	2	490.7376403808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEDEPLHAL_	ENSG00000168066|ENST00000377390|SF1;nc|ENSG00000168066|Q15637-2|SF1;nc|ENSG00000168066|Q15637-3|SF1;nc|ENSG00000168066|Q15637-4|SF1;nc|ENSG00000168066|Q15637-5|SF1;nc|ENSG00000168066|Q15637-6|SF1;nc|ENSG00000168066|Q15637-7|SF1;SF1|p.V573Sfs*23|1|0.22|ENSG00000168066|chr11:64766025-64766025|G/-|frameshift_variant	102.7733458925114	0.03637199559902695	2				NaN	NaN	0	NaN	8798	3814	12610
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12615	33.974	NaN	6830.6	30	0	816.46	0.106	+			12916	GESGLGKSTLI	11	72	531.2957776251685	1060.577002317137	2	531.2951049804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GESGLGKSTLI_	ENSG00000122545|ENST00000350320|SEPTIN7;ENSG00000168385|ENST00000391971|SEPTIN2;ENSG00000180096|ENST00000321367|SEPTIN1;ENST00000366210.2_1_2:242263647-242276275:+|nuORF;ENST00000425198.1_1_7:35872473-35938044:+|nuORF;ENST00000467971.5_1_2:242255375-242276932:+|nuORF;ENST00000484740.1_1_2:242255375-242274650:+|nuORF;ENST00000494824.5_1_2:242255375-242275396:+|nuORF;ENST00000563743.1_1_16:30393079-30393866:-|nuORF;ENST00000563957.6_1_16:30392598-30394125:-|nuORF;nc|ENSG00000122545|Q16181-2|SEPTIN7;nc|ENSG00000168385|Q15019-2|SEPTIN2;nc|ENSG00000168385|Q15019-3|SEPTIN2;nc|ENSG00000180096|Q8WYJ6-2|SEPTIN1	85.97309937166196	0.11525962777432051	2				NaN	NaN	0	NaN	8799	3814	12610
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12616	33.975	NaN	3861.1	30	0	1605.2	0.106	+			5726	AVFPSIVGRPR	11	48	400.2399197281746	1197.6979297847238	3	400.2398986816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AVFPSIVGRPR_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196604|ENST00000409914|POTEF;ENSG00000196834|ENST00000451531|POTEI;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000473016.1_1_2:74120109-74129648:+|nuORF;ENST00000477812.1_1_7:5569027-5569288:-|nuORF;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000482085.1_1_10:90708534-90712518:-|nuORF;ENST00000488967.5_1_10:90706975-90712518:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;nc|ENSG00000204434|Q9BYX7|POTEKP;POTEE|p.N792Kfs*34|1|0.2|ENSG00000188219|chr2:131263828-131263829|-/A|frameshift_variant	31.634271133179894	0.6579734920221648	2				NaN	NaN	0	NaN	8800	3814	12610
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12617	33.977	NaN	1939.9	30	0	112.13	0.037			+	8648	EDLIFYKLS	9	61	376.53730683192873	NaN	0	376.5376281738281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EDLIFYKLS_	REV__tr|U7SK95|U7SK95_FUSNURNAhelicaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02151PE=3SV=1	30.503639358989545	0.3235605894931338	2				NaN	NaN	0	NaN	8801	3814	12610
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12628	34.003	NaN	57956	30	0	9186.1	0.214	+			36041	SEISNIARV	9	103	494.7748702833037	987.5351876334074	2	494.77459716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEISNIARV_	ENSG00000016490|ENST00000394711|CLCA1	129.42129120953632	0.01549634589885217	2				NaN	NaN	0	NaN	8809	3817	12627
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12629	34.007	NaN	11317	30	0	914.95	0.106			+	27810	MSKEIVLPY	9	74	548.2889328165929	1094.5633126999858	2	548.295166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_M(Oxidation (M))SKEIVLPY_	REV__tr|U7SV52|U7SV52_FUSNUGlucose-1-phosphateadenylyltransferase,GlgDsubunitOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01132PE=3SV=1	66.42927471994793	0.16001998865088202	2				NaN	NaN	0	NaN	8810	3817	12627
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12630	34.009	NaN	9404.2	30	0	1462.6	0.106	+			8400	EAPAHISAM	9	69	463.7235155468465	925.432478160493	2	463.7235107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EAPAHISAM_	HS3ST3A1|p.R228H|1|0.24|ENSG00000153976|chr17:13496735-13496735|C/T|missense_variant;HS3ST3B1|p.R213H|1|0.44|ENSG00000125430|chr17:14345111-14345111|G/A|missense_variant	65.80317337860623	0.1652391959156183	2				NaN	NaN	0	NaN	8811	3817	12627
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12631	34.01	NaN	4727.8	30	0	2653.4	0.106	+			295	AAPGAVHPLT	10	50	467.2615632417222	932.5085735502444	2	467.26123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AAPGAVHPLT_	ENST00000358729.8_1_1:110163725-110168306:+|nuORF	24.20275056022122	0.6821818413321409	2				NaN	NaN	0	NaN	8812	3817	12627
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12632	34.012	NaN	3532.6	30	0	527.13	0.106	+			30015	PPLLTSSK	8	72	421.75289904407816	NaN	0	421.75274658203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PPLLTSSK_	ENSG00000180530|ENST00000318948|NRIP1;NRIP1|p.E729Rfs*5|1|0.34|ENSG00000180530|chr21:14966009-14966009|T/-|frameshift_variant;NRIP1|p.E729Rfs*8|1|0.33|ENSG00000180530|chr21:14966008-14966009|-/T|frameshift_variant	68.78682469695295	1.7418937515398478	2				NaN	NaN	0	NaN	8813	3817	12627
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12633	34.014	NaN	4424	30	0	714.71	0.106	+			51189	YPKANIVAY	9	73	519.7848090960783	1037.5550652589566	2	519.7843627929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YPKANIVAY_	ENSG00000126261|ENST00000246548|UBA2;ENST00000592841.5_1_19:34919394-34922879:+|nuORF	40.77816245573522	0.41113185337114944	2				NaN	NaN	0	NaN	8814	3817	12627
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12634	34.016	NaN	5456.8	30	0	421.36	0.038	+			41371	SVMEVNSGIYR	11	83	627.8100913397134	1253.6056297462267	2	627.8112182617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVMEVNSGIYR_	ENSG00000187522|ENST00000378372|HSPA14	105.16503226865211	0.050009141116738	2				NaN	NaN	0	NaN	8815	3817	12627
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12645	34.041	NaN	23066	30	0	2948.5	0.214	+			45495	TYDSVTDKF	9	94	538.2509040701066	1074.487255207013	2	538.2509155273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TYDSVTDKF_	ENSG00000115464|ENST00000398571|USP34;ENST00000463046.5_1_2:61463458-61483580:-|nuORF;nc|ENSG00000115464|Q70CQ2-2|USP34;nc|ENSG00000115464|Q70CQ2-3|USP34;USP34|p.L2716Sfs*30|1|0.05|ENSG00000115464|chr2:61214596-61214597|-/AAGCTGA|frameshift_variant;USP34|p.L3228*|1|0.22|ENSG00000115464|chr2:61190564-61190564|A/-|frameshift_variant	101.45984612302182	0.0377122763612125	2				NaN	NaN	0	NaN	8823	3820	12644
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12646	34.045	NaN	25186	30	0	3565	0.106	+			45627	TYQQVQQTL	9	88	554.7854947170604	1107.5564365009207	2	554.7855224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TYQQVQQTL_	ENSG00000126254|ENST00000262633|RBM42;nc|ENSG00000126254|Q9BTD8-2|RBM42;nc|ENSG00000126254|Q9BTD8-3|RBM42;nc|ENSG00000126254|Q9BTD8-4|RBM42	131.61620852596164	0.014413238321579053	2				NaN	NaN	0	NaN	8824	3820	12644
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12647	34.047	NaN	11958	30	0	3415.1	0.106	+			22069	KSKVLVKSP	9	81	329.2181442337728	984.6326033015184	3	329.2181091308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KSKVLVKSP_	BRCA2|p.N1544Tfs*24|1|0.22|ENSG00000139618|chr13:32338982-32338982|A/-|frameshift_variant	27.882242232435846	0.5426732730940306	2				NaN	NaN	0	NaN	8825	3820	12644
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12648	34.048	NaN	11858	30	0	874.59	0.106				-1	 	0	76	506.7537847530726	1011.4930165729452	2	506.753662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8826	3820	12644
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12649	34.05	NaN	10859	30	0	935.18	0.106			+	22221	KSVRKESEA	9	78	517.2865820271008	1032.5586111210016	2	517.2864990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KSVRKESEA_	REV__LTR7B_dup599|chr13:43059672-43060100:-|1.016192942152016|0.1328468061351861|2.94|472.0|28|3|anti-sense;REV__LTR7Y_dup128|chrX:4540474-4540914:-|2.433378595797467|0.000861881152375|11.46|443.0|28|3|anti-sense	47.95952297671804	0.32689736945648856	2				NaN	NaN	0	NaN	8827	3820	12644
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12650	34.052	NaN	6278.1	30	0	721.72	0.106			+	25583	LQGGQAAQVV	10	70	485.76880090380797	NaN	0	485.7684326171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LQGGQAAQVV_	REV__ENSG00000140675|ENST00000330498|SLC5A2	58.78195531508484	0.24422493511477816	2				NaN	NaN	0	NaN	8828	3820	12644
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12651	34.054	NaN	6897.7	30	0	1924.7	0.034			+	25768	LSAKYRPD	8	74	475.25862952766204	948.5027061221241	2	475.25830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSAKYRPD_	REV__ENSG00000100426|ENST00000216268|ZBED4	60.97194046774394	0.49215940876911696	2				NaN	NaN	0	NaN	8829	3820	12644
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12658	34.071	NaN	54373	30	0	25959	0.214	+			6670	AYVHMVTHF	9	87	368.8481767268375	1103.5227007807125	3	368.8481750488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AYVHMVTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	57.81127852772723	0.2318599694398087	2				NaN	NaN	0	NaN	8833	3823	12657
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12659	34.074	NaN	18273	30	0	2257.2	0.106	+			15622	GVLAWVKEK	9	83	515.3081266226	1028.6017003119998	2	515.307861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GVLAWVKEK_	ENSG00000008517|ENST00000525643|IL32;nc|ENSG00000008517|P24001-3|IL32;nc|ENSG00000008517|P24001-5|IL32;nc|ENSG00000008517|P24001-6|IL32;nc|ENSG00000008517|P24001-7|IL32;nc|ENSG00000008517|P24001|IL32	122.1759843771914	0.019882474861609503	2				NaN	NaN	0	NaN	8834	3823	12657
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12660	34.076	NaN	7904.2	30	0	1396.2	0.106				-1	ASMKKVKSL	9	73	336.534227507259	NaN	0	336.5341796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_ASM(Oxidation (M))KKVKSL_	ENST00000369426.9_1_1:119575536-119588262:-|nuORF	32.81241826257853	0.3119040447479903	2				NaN	NaN	0	NaN	8835	3823	12657
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12661	34.078	NaN	6577.6	30	0	903.39	0.106				-1	 	0	60	402.7583113378907	803.5020697425814	2	402.75811767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8836	3823	12657
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12662	34.08	NaN	13490	30	0	1565.1	0.106	+			34792	RYLEGTSCI	9	75	521.2551870855987	1040.4958212379972	2	521.2551879882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RYLEGTSCI_	ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1	65.46538089061403	0.16805504838372562	2				NaN	NaN	0	NaN	8837	3823	12657
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12663	34.082	NaN	4611.6	30	0	571.24	0.106	+			39867	STLPHQERIQ	10	75	604.8225043275723	1207.6304557219446	2	604.822509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STLPHQERIQ_	ENST00000525288.5_3_19:37314612-37328945:-|nuORF	67.49366992349736	0.29779660154124327	2				NaN	NaN	0	NaN	8838	3823	12657
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12664	34.084	NaN	3661	30	0	325.3	0.034	+			23405	LAALTWTSL	9	71	488.2769445888307	974.5393362444614	2	488.2757873535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LAALTWTSL_	DNAH5|p.F4486Lfs*7|2|0.23|ENSG00000039139|chr5:13701317-13701317|A/-|frameshift_variant;DNAH5|p.G1976Efs*78|3|0.44|ENSG00000039139|chr5:13830731-13830731|C/-|frameshift_variant;DNAH5|p.I1855Sfs*16|1|0.33|ENSG00000039139|chr5:13841052-13841052|T/-|frameshift_variant;DNAH5|p.I2945Rfs*76|1|0.07|ENSG00000039139|chr5:13780948-13780949|-/CATTTCTCTT|frameshift_variant;DNAH5|p.I4068*|1|0.07|ENSG00000039139|chr5:13721077-13721077|T/-|frameshift_variant;DNAH5|p.L1467Wfs*3|1|0.23|ENSG00000039139|chr5:13864593-13864593|A/-|frameshift_variant;DNAH5|p.P3316Lfs*22|3|0.33|ENSG00000039139|chr5:13766130-13766130|G/-|frameshift_variant;ENSG00000039139|ENST00000265104|DNAH5	55.50420428727701	0.2510918378945873	2				NaN	NaN	0	NaN	8839	3823	12657
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12676	34.11	NaN	23477	30	0	6804.9	0.214	+			47375	VPHSIINGY	9	74	500.26644375058197	998.518334567964	2	500.266357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VPHSIINGY_	ENSG00000089157|ENST00000392514|RPLP0;nc|ENSG00000089157|P05388-2|RPLP0;nc|ENSG00000213553|Q8NHW5|RPLP0P6	152.47061609516894	0.006293267927334181	2				NaN	NaN	0	NaN	8848	3826	12675
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12677	34.113	NaN	21728	30	0	4753.4	0.106	+			5987	AVLSWKLAK	9	76	508.31855422059544	1014.6225555079909	2	508.31842041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVLSWKLAK_	ENSG00000188725|ENST00000339020|SMIM15;SMIM15|p.M47T|1|0.4|ENSG00000188725|chr5:61160032-61160032|A/G|missense_variant	176.08678752253132	0.0017279326439731339	2				NaN	NaN	0	NaN	8849	3826	12675
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12678	34.115	NaN	33618	30	0	5115	0.106	+			50962	YIHVGAQL	8	82	450.75044392955203	899.4863349259041	2	450.75030517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YIHVGAQL_	ENSG00000176658|ENST00000318217|MYO1D	114.5961677871614	0.2422812628153066	2				NaN	NaN	0	NaN	8850	3826	12675
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12679	34.117	NaN	15230	30	0	1264.1	0.106	+			6673	AYVHMVTHF	9	75	552.7682709412602	1103.5219889493203	2	552.768798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AYVHMVTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	170.31369407433692	0.002713371642900501	2				NaN	NaN	0	NaN	8851	3826	12675
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12680	34.119	NaN	11712	30	0	3059.3	0.106	+			1282	AESKNGWTL	9	80	503.25345443190855	1004.4923559306171	2	503.2536926269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AESKNGWTL_	ENSG00000110048|ENST00000263847|OSBP	104.01359247289065	0.03510646158778409	2				NaN	NaN	0	NaN	8852	3826	12675
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12681	34.121	NaN	5760	30	0	568.56	0.106	+			23736	LAWVSVAK	8	69	437.26325458725853	872.5119562413171	2	437.2630920410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LAWVSVAK_	ENST00000354410.9_2_15:100253456-100253522:+|nuORF	71.29570347882199	0.39610197767395533	2				NaN	NaN	0	NaN	8853	3826	12675
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12682	34.122	NaN	6625.9	30	0	1409.6	0.034			+	47643	VSAVQVVQL	9	65	471.7842137029987	NaN	0	471.7843017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VSAVQVVQL_	REV__nc|ENSG00000170325|Q9NQV6-2|PRDM10	69.6276240434122	0.10825701912424071	2				NaN	NaN	0	NaN	8854	3826	12675
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12694	34.148	NaN	6920.9	30	0	1806	0.214	+			47995	VSPVVRVAV	9	64	463.2949491836262	924.5753454340525	2	463.2945251464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSPVVRVAV_	ENSG00000167658|ENST00000309311|EEF2	29.14955571784316	0.5308295550522326	2				NaN	NaN	0	NaN	8863	3829	12693
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12695	34.151	NaN	7143.6	30	0	683	0.106	+			825	AEGEIYTKL	9	74	512.2715992804077	1022.5286456276154	2	512.271240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEGEIYTKL_	ENSG00000138190|ENST00000260762|EXOC6;EXOC6|p.L640Ffs*39|1|0.37|ENSG00000138190|chr10:92974192-92974193|-/T|frameshift_variant;nc|ENSG00000138190|Q8TAG9-2|EXOC6	101.45984612302182	0.0377122763612125	2				NaN	NaN	0	NaN	8864	3829	12693
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12696	34.153	NaN	7078.6	30	0	1340	0.106	+			49429	VVVDPIQSVK	10	78	542.3243796530543	1082.6342063729085	2	542.3240356445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVVDPIQSVK_	ENSG00000115233|ENST00000409682|PSMD14	66.96192283764107	0.30252237217063654	2				NaN	NaN	0	NaN	8865	3829	12693
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12697	34.155	NaN	5555.7	30	0	1084.7	0.106	+			23210	KYFSDGSSNTF	11	77	626.7771479038322	1251.5397428744643	2	626.7777099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KYFSDGSSNTF_	ENSG00000132640|ENST00000378226|BTBD3;nc|ENSG00000132640|Q9Y2F9-2|BTBD3	45.908116695636124	0.4771019740774998	2				NaN	NaN	0	NaN	8866	3829	12693
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12698	34.157	NaN	6606.2	30	0	697.52	0.106	+			45654	TYTDVTPRQF	10	78	614.304349721198	1226.594146509196	2	614.3037719726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TYTDVTPRQF_	ENSG00000084090|ENST00000337288|STARD7;ENST00000462501.1_1_2:96858901-96861247:-|nuORF;STARD7|p.N240Tfs*3|1|0.15|ENSG00000084090|chr2:96193102-96193102|T/-|frameshift_variant	70.8162118820467	0.27065172005956	2				NaN	NaN	0	NaN	8867	3829	12693
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12699	34.159	NaN	4499.2	30	0	450.32	0.106			+	-1	YGLKMNLGFE	10	70	594.2908308543268	1186.5671087754536	2	594.291748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_YGLKM(Oxidation (M))NLGFE_	REV__ANKMY1|p.D434Gfs*17|1|0.64|ENSG00000144504|chr2:240524149-240524150|-/C|frameshift_variant;REV__ANKMY1|p.V598Yfs*37|1|0.29|ENSG00000144504|chr2:240512888-240512888|C/-|frameshift_variant;REV__ANKMY1|p.Y380Lfs*2|1|0.21|ENSG00000144504|chr2:240524312-240524313|AC/-|frameshift_variant;REV__ENSG00000144504|ENST00000401804|ANKMY1;REV__ENST00000462004.5_1_2:241465748-241494351:-|nuORF;REV__ENST00000464991.5_1_2:241492231-241494423:-|nuORF;REV__nc|ENSG00000144504|Q9P2S6-2|ANKMY1;REV__nc|ENSG00000144504|Q9P2S6-3|ANKMY1;REV__nc|ENSG00000144504|Q9P2S6-4|ANKMY1;REV__nc|ENSG00000144504|Q9P2S6|ANKMY1	44.116797842482775	0.5112108506279902	2				NaN	NaN	0	NaN	8868	3829	12693
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12700	34.161	NaN	3000	30	0	349.25	0.034			+	47007	VKVLDDIN	8	67	458.26065947413986	914.5067660150797	2	458.2604675292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VKVLDDIN_	REV__ENSG00000168924|ENST00000302787|LETM1	73.97473282117947	0.3737790450121076	2				NaN	NaN	0	NaN	8869	3829	12693
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12712	34.186	NaN	213400	30	0	26961	0.162	+			39641	STIEYVIQR	9	98	554.803127509496	1107.591702085792	2	554.8033447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STIEYVIQR_	ENSG00000101310|ENST00000650089|SEC23B	221.32646213459157	8.329768309627097E-09	2				NaN	NaN	0	NaN	8878	3832	12711
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12713	34.189	NaN	7761	30	0	761.99	0.106	+			42068	SYASLQQNKW	10	74	612.8045100040788	1223.5944670749575	2	612.80419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SYASLQQNKW_	ENSG00000104133|ENST00000261866|SPG11;nc|ENSG00000104133|Q96JI7-2|SPG11;nc|ENSG00000104133|Q96JI7-3|SPG11;SPG11|p.L950Wfs*13|2|0.21|ENSG00000104133|chr15:44615552-44615552|A/-|frameshift_variant	131.61620852596164	0.01298938390812184	2				NaN	NaN	0	NaN	8879	3832	12711
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12714	34.191	NaN	5593.8	30	0	693.35	0.106	+			12501	GEEKLIASV	9	68	473.26609241352014	944.5176318938403	2	473.265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEEKLIASV_	ENSG00000130713|ENST00000372358|EXOSC2;ENST00000430138.6_1_9:133569178-133570981:+|nuORF;ENST00000463488.1_1_9:133569202-133574940:+|nuORF;ENST00000491115.6_1_9:133569178-133574746:+|nuORF;nc|ENSG00000130713|Q13868-2|EXOSC2;nc|ENSG00000130713|Q13868-3|EXOSC2	120.8684288430529	0.02067403653475984	2				NaN	NaN	0	NaN	8880	3832	12711
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12715	34.193	NaN	5635.4	30	0	687.52	0.106	+			13993	GSDLPIIEK	9	72	486.27384399379963	970.5331350543993	2	486.2731018066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GSDLPIIEK_	ENSG00000198825|ENST00000650623|INPP5F;INPP5F|p.A917Qfs*71|1|0.07|ENSG00000198825|chr10:119827129-119827130|-/CAGAGTG|frameshift_variant;nc|ENSG00000198825|Q9Y2H2-4|INPP5F	56.43379154798735	0.2433427591689151	2				NaN	NaN	0	NaN	8881	3832	12711
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12716	34.194	NaN	4522.4	30	0	691.56	0.106			+	29929	PLVKATVDL	9	57	478.2946066157081	NaN	0	478.2942199707031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PLVKATVDL_	REV__ENSG00000156463|ENST00000359120|SH3RF2	51.33545320467046	0.19748963086191895	2				NaN	NaN	0	NaN	8882	3832	12711
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12717	34.196	NaN	3498.1	30	0	264.14	0.106	+			10999	FEGVSPKSL	9	67	482.260986328125	NaN	0	482.260986328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FEGVSPKSL_	ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC;PRKDC|p.D2437Wfs*3|1|0.11|ENSG00000253729|chr8:47840161-47840162|-/CA|frameshift_variant;PRKDC|p.E1557Sfs*16|1|0.16|ENSG00000253729|chr8:47886051-47886051|C/-|frameshift_variant;PRKDC|p.G1227Vfs*50|2|0.31|ENSG00000253729|chr8:47893306-47893306|C/-|frameshift_variant;PRKDC|p.K3681Nfs*6|1|0.32|ENSG00000253729|chr8:47785174-47785177|TTCT/-|frameshift_variant;PRKDC|p.M3670*|1|0.5|ENSG00000253729|chr8:47785212-47785212|T/-|frameshift_variant;PRKDC|p.M3846Cfs*12|1|0.13|ENSG00000253729|chr8:47779047-47779047|T/-|frameshift_variant;PRKDC|p.M4020Cfs*2|1|0.31|ENSG00000253729|chr8:47776968-47776968|T/-|frameshift_variant;PRKDC|p.N3605Kfs*3|1|0.22|ENSG00000253729|chr8:47788993-47788994|-/T|frameshift_variant;PRKDC|p.N4037Ifs*15|1|0.17|ENSG00000253729|chr8:47776916-47776916|T/-|frameshift_variant;PRKDC|p.R2704Gfs*13|2|0.34|ENSG00000253729|chr8:47834238-47834238|T/-|frameshift_variant;PRKDC|p.S3402Ifs*16|1|0.04|ENSG00000253729|chr8:47799302-47799303|-/AAACCGTGAGTTAGAGGAGGTAA|frameshift_variant;PRKDC|p.S4099Qfs*6|1|0.25|ENSG00000253729|chr8:47774265-47774265|A/-|frameshift_variant;PRKDC|p.T3268Pfs*7|1|0.5|ENSG00000253729|chr8:47803426-47803426|T/-|frameshift_variant;PRKDC|p.W3401Cfs*4|1|0.01|ENSG00000253729|chr8:47799304-47799305|-/AATGAATA|frameshift_variant	45.97224482568171	0.23445038899310136	2				NaN	NaN	0	NaN	8883	3832	12711
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12718	34.198	NaN	3691.7	30	0	457.17	0.037			+	30394	PVQSRAERDL	10	74	585.8128154084309	1169.6110778836617	2	585.8129272460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PVQSRAERDL_	REV__ENST00000473661.5_1_3:9867594-9876502:+|nuORF	23.52269567125451	0.6877354443478558	2				NaN	NaN	0	NaN	8884	3832	12711
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12729	34.223	NaN	22065	30	0	3592.3	0.214	+			34881	RYVMTTTTL	9	78	543.2872145923632	1084.5598762515262	2	543.2874755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RYVMTTTTL_	ENSG00000134001|ENST00000256383|EIF2S1	104.0567914643314	0.03506238181059741	2				NaN	NaN	0	NaN	8892	3835	12728
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12730	34.227	NaN	21529	30	0	4467.7	0.106	+			33144	RESGTLLELK	10	74	573.3305105922436	1144.6464682512872	2	573.3306884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RESGTLLELK_	ENST00000559390.5_1_15:45021236-45021584:+|nuORF;ENST00000561237.1_1_15:45021341-45023561:+|nuORF	117.81106730687013	0.030421278947300796	2				NaN	NaN	0	NaN	8893	3835	12728
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12731	34.229	NaN	9255.6	30	0	1614.7	0.106	+			46715	VGLVGREL	8	63	421.7582243111595	841.501895689119	2	421.7580261230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VGLVGREL_	ENSG00000261150|ENST00000615648|EPPK1;EPPK1|p.G2015Vfs*36|2|0.33|ENSG00000261150|chr8:143867210-143867210|C/-|frameshift_variant	82.24051045832904	0.30490469762271794	2				NaN	NaN	0	NaN	8894	3835	12728
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12732	34.231	NaN	16396	30	0	1918.9	0.106	+			41282	SVLLFVTKK	9	89	517.8342208057803	1033.6538886783605	2	517.8346557617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVLLFVTKK_	ENSG00000198231|ENST00000389924|DDX42;ENST00000578593.1_1_17:61889231-61895755:+|nuORF;nc|ENSG00000198231|Q86XP3-2|DDX42	154.0112374973812	0.005934173778894772	2				NaN	NaN	0	NaN	8895	3835	12728
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12733	34.232	NaN	9454.8	30	0	512.07	0.106	+			13859	GQWKKGFVL	9	77	531.8086940375671	1061.602835141934	2	531.8090209960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GQWKKGFVL_	ENSG00000142864|ENST00000361219|SERBP1;ENST00000484880.1_1_1:67885652-67890638:-|nuORF;nc|ENSG00000142864|Q8NC51-2|SERBP1;nc|ENSG00000142864|Q8NC51-4|SERBP1;nc|ENSG00000142864|Q8NC51|SERBP1	76.7741389293348	0.11149722112137898	2				NaN	NaN	0	NaN	8896	3835	12728
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12734	34.234	NaN	3502.2	30	0	966.19	0.106			+	26728	LVLKNLTKG	9	55	329.2181442337728	984.6326033015184	3	329.21832275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LVLKNLTKG_	REV__nc|ENSG00000116062|P52701-2|MSH6	26.79610172149135	0.5528238334041078	2				NaN	NaN	0	NaN	8897	3835	12728
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12735	34.236	NaN	7522.9	30	0	1346.3	0.034			+	2437	APGNIAVVIP	10	72	475.78691137070905	NaN	0	475.7873229980469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_APGNIAVVIP_	REV__ENSG00000166446|ENST00000570137|CDYL2	44.116797842482775	0.3427969396372342	2				NaN	NaN	0	NaN	8898	3835	12728
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12747	34.261	NaN	47688	30	0	14472	0.212	+			4635	ATLPPITVTSK	11	81	564.3372355618601	1126.65991819052	2	564.3372192382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATLPPITVTSK_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	86.18897241530135	0.11437590510873513	2				NaN	NaN	0	NaN	8907	3838	12746
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12748	34.265	NaN	42382	30	0	6792.4	0.106	+			36316	SESLPVRTL	9	96	501.28499157831425	1000.5554302234285	2	501.28472900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SESLPVRTL_	ENSG00000075420|ENST00000415807|FNDC3B;FNDC3B|p.T1056Hfs*16|1|0.43|ENSG00000075420|chr3:172378419-172378420|-/C|frameshift_variant	106.68306549817024	0.032382560583716295	2				NaN	NaN	0	NaN	8908	3838	12746
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12749	34.267	NaN	23579	30	0	5026.3	0.106	+			25845	LSELGGKPTN	10	83	508.2746151741601	1014.5346774151202	2	508.2743835449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSELGGKPTN_	ENST00000323460.9_1_3:196658967-196659150:+|nuORF	59.93077597824379	0.36646980200755325	2				NaN	NaN	0	NaN	8909	3838	12746
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12750	34.269	NaN	14492	30	0	3671.7	0.106	+			18639	ISTNLKIP	8	76	443.2738095349769	884.5330661367539	2	443.2735290527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ISTNLKIP_	nc|ENSG00000237621|Q8NGU1|OR9A1P	74.25504064058377	0.37144338840759816	2				NaN	NaN	0	NaN	8910	3838	12746
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12751	34.27	NaN	9414.9	30	0	1243.4	0.106	+			36468	SEVQDRVML	9	73	538.7740478744556	1075.5335428157111	2	538.774169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SEVQDRVML_	ENSG00000119801|ENST00000261353|YPEL5	85.86182877749512	0.07653218437724067	2				NaN	NaN	0	NaN	8911	3838	12746
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12752	34.272	NaN	7215.9	30	0	1380.3	0.106				-1	QLMAWALHF	9	67	566.7827454748466	1131.550938016493	2	566.7828369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_QLM(Oxidation (M))AWALHF_	ENSG00000102977|ENST00000620761|ACD;ENST00000602622.5_1_16:67691511-67691700:-|nuORF;ENST00000602656.1_1_16:67691511-67691807:-|nuORF;ENST00000602860.5_1_16:67691511-67693112:-|nuORF;nc|ENSG00000102977|Q96AP0-2|ACD	40.5726180659479	0.4135428067754104	2				NaN	NaN	0	NaN	8912	3838	12746
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12753	34.274	NaN	4865.9	30	0	367.16	0.036			+	-1	KLEIRFNE	8	82	545.8002576638837	NaN	0	545.798828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))KLEIRFNE_	REV__ENSG00000123901|ENST00000243673|GPR83;REV__GPR83|p.W347L|1|0.19|ENSG00000123901|chr11:94380381-94380381|C/A|missense_variant;REV__nc|ENSG00000123901|Q9NYM4-2|GPR83	53.351449002276354	1.7418937515398478	2				NaN	NaN	0	NaN	8913	3838	12746
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12765	34.3	NaN	12079	30	0	2395.3	0.214	+			5229	ATVAAILQH	9	74	462.26907913965334	922.5236053461067	2	462.2688293457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATVAAILQH_	ENSG00000183340|ENST00000332349|JRKL;JRKL|p.D446Gfs*26|1|0.07|ENSG00000183340|chr11:96391985-96391986|-/GTTTTACT|frameshift_variant	176.41073772950895	0.0016726359177844747	2				NaN	NaN	0	NaN	8922	3841	12764
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12766	34.304	NaN	7566.7	30	0	645.52	0.106	+			11791	FSPINTTQF	9	72	527.7638945418813	1053.5132361505625	2	527.7639770507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FSPINTTQF_	RTTN|p.F276Sfs*69|2|0.11|ENSG00000176225|chr18:70196515-70196515|A/-|frameshift_variant	73.97473282117947	0.12360187025703594	2				NaN	NaN	0	NaN	8923	3841	12764
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12767	34.306	NaN	4920.9	30	0	661.56	0.106	+			3299	ASLSLTLQK	9	67	480.7899496634239	959.5653463936478	2	480.78955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASLSLTLQK_	ENSG00000100242|ENST00000689035|SUN2;nc|ENSG00000100242|Q9UH99-2|SUN2;nc|ENSG00000100242|Q9UH99-3|SUN2	109.47833844074708	0.029530294723441826	2				NaN	NaN	0	NaN	8924	3841	12764
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12768	34.307	NaN	5785	30	0	528.75	0.106				-1	YHCIICSATI	10	70	619.2889329539421	1236.563312974684	2	619.2888793945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_YHC(Carbamidomethyl (C))IIC(Carbamidomethyl (C))SATI_	ENSG00000121486|ENST00000367506|TRMT1L;nc|ENSG00000121486|Q7Z2T5-2|TRMT1L;TRMT1L|p.M256Nfs*17|1|0.13|ENSG00000121486|chr1:185143918-185143919|-/T|frameshift_variant	44.116797842482775	0.5112108506279902	2				NaN	NaN	0	NaN	8925	3841	12764
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12769	34.309	NaN	4870.8	30	0	1505.5	0.106			+	-1	ARGVSCPLCT	10	60	374.1794477134007	1119.5165137404022	3	374.1796569824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C)	_ARGVSC(Carbamidomethyl (C))PLC(Carbamidomethyl (C))T_	REV__ENST00000497675.2_1_1:2124722-2124944:-|nuORF	26.063383197487333	0.6669871633831898	2				NaN	NaN	0	NaN	8926	3841	12764
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12770	34.311	NaN	2651.4	30	0	500.2	0.106			+	-1	FDQGHIIRM	9	68	378.19082044561856	1131.5506319370556	3	378.19091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_FDQGHIIRM(Oxidation (M))_	REV__ENSG00000120063|ENST00000439174|GNA13	39.252832667884924	0.4290233611298554	2				NaN	NaN	0	NaN	8927	3841	12764
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12771	34.313	NaN	4947.3	30	0	527.02	0.037	+			36127	SEKQEQLYL	9	70	569.2925851167066	1136.5706173002131	2	569.2940673828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SEKQEQLYL_	ENSG00000163104|ENST00000354268|SMARCAD1;nc|ENSG00000163104|Q9H4L7-2|SMARCAD1;nc|ENSG00000163104|Q9H4L7-3|SMARCAD1;SMARCAD1|p.L754I|2|0.31|ENSG00000163104|chr4:94278697-94278697|C/A|missense_variant	56.43379154798735	0.2433427591689151	2				NaN	NaN	0	NaN	8928	3841	12764
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12782	34.339	NaN	8252.7	30	0	542.45	0.214			+	-1	GRGLDSVTVM	10	77	525.7677281725355	1049.520903411871	2	525.7681884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_GRGLDSVTVM(Oxidation (M))_	REV__ENST00000392771.1_2_2:160803104-160803332:-|nuORF	58.22992032128504	0.38193887838457763	2				NaN	NaN	0	NaN	8936	3844	12781
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12783	34.342	NaN	5395.9	30	0	315.64	0.106	+			36042	SEISNIARV	9	69	494.7748702833037	987.5351876334074	2	494.77496337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEISNIARV_	ENSG00000016490|ENST00000394711|CLCA1	61.691277971877994	0.19951612995419254	2				NaN	NaN	0	NaN	8937	3844	12781
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12784	34.344	NaN	9141.3	30	0	691.67	0.106	+			51535	YWQNHPEL	8	90	543.7540430195074	1085.4935331058148	2	543.7544555664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YWQNHPEL_	ENSG00000119203|ENST00000238112|CPSF3	66.42927471994793	0.4381325844043345	2				NaN	NaN	0	NaN	8938	3844	12781
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12785	34.346	NaN	3465.4	30	0	497.04	0.106	+			46473	VETGHLAAF	9	64	472.7453481188312	943.4761433044624	2	472.74566650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VETGHLAAF_	ENSG00000148843|ENST00000369797|PDCD11	57.81127852772723	0.2318599694398087	2				NaN	NaN	0	NaN	8939	3844	12781
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12786	34.348	NaN	3906.1	30	0	221.7	0.106	+			31490	QLDHLLDP	8	70	475.7507111949953	949.4868694567906	2	475.75103759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QLDHLLDP_	ENSG00000239900|ENST00000623063|ADSL	51.33545320467046	0.5859736979383976	2				NaN	NaN	0	NaN	8940	3844	12781
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12787	34.35	NaN	3300.2	30	0	261.23	0.106			+	47177	VLTQRNPKN	9	77	535.3071205440385	1068.599688154877	2	535.3081665039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VLTQRNPKN_	REV__ENSG00000170734|ENST00000372236|POLH;REV__nc|ENSG00000170734|Q9Y253-2|POLH;REV__POLH|p.F708Lfs*4|1|0.28|ENSG00000170734|chr6:43614534-43614534|T/-|frameshift_variant	39.252832667884924	0.4290233611298554	2				NaN	NaN	0	NaN	8941	3844	12781
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12788	34.351	NaN	4804.7	30	0	583.15	0.034			+	46491	VETVLGLIQ	9	74	486.2923230107008	970.5700930882016	2	486.2928161621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VETVLGLIQ_	REV__ENSG00000157600|ENST00000372068|TMEM164;REV__nc|ENSG00000157600|Q5U3C3-2|TMEM164	113.41158876095287	0.025516849225023126	2				NaN	NaN	0	NaN	8942	3844	12781
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12800	34.377	NaN	6915.6	30	0	1948.3	0.214			+	26158	LSQPKNSLI	9	62	500.2952910862065	998.576029239213	2	500.2950744628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSQPKNSLI_	REV__ENSG00000147488|ENST00000689386|ST18;REV__ST18|p.E810Kfs*5|1|0.31|ENSG00000147488|chr8:52133074-52133074|T/-|frameshift_variant;REV__ST18|p.F884Lfs*27|1|0.33|ENSG00000147488|chr8:52131972-52131972|A/-|frameshift_variant;REV__ST18|p.L941Hfs*8|1|0.04|ENSG00000147488|chr8:52118375-52118376|-/AACTTGTGTGAAAATATAT|frameshift_variant;REV__ST18|p.N621Ifs*10|2|0.23|ENSG00000147488|chr8:52149922-52149922|T/-|frameshift_variant	54.776311868738084	0.25715957988447635	2				NaN	NaN	0	NaN	8951	3847	12799
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12801	34.38	NaN	12149	30	0	2734	0.106	+			14563	GTFLEGVAK	9	64	461.25570623969503	920.4968595461901	2	461.2553405761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTFLEGVAK_	ENSG00000174886|ENST00000308961|NDUFA11;ENST00000593233.1_1_19:5894755-5901370:-|nuORF;nc|ENSG00000174886|Q86Y39-2|NDUFA11	93.1432384553994	0.056003526918089595	2				NaN	NaN	0	NaN	8952	3847	12799
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12802	34.382	NaN	4780.5	30	0	697.78	0.106			+	24004	LEAVKLKLA	9	78	328.88649507902	NaN	0	328.88641357421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LEAVKLKLA_	REV__ENSG00000123584|ENST00000243314|MAGEA9;REV__ENSG00000267978|ENST00000595065|MAGEA9B	63.30626980617807	0.13521764763214936	2				NaN	NaN	0	NaN	8953	3847	12799
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12803	34.384	NaN	11883	30	0	954.91	0.106	+			24710	LHHGHDPRGG	10	87	541.7661185421738	1081.5176841511475	2	542.2662963867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LHHGHDPRGG_	ENSG00000204469|ENST00000376033|PRRC2A;nc|ENSG00000204469|P48634-2|PRRC2A;nc|ENSG00000204469|P48634-3|PRRC2A;nc|ENSG00000204469|P48634-4|PRRC2A;PRRC2A|p.A1596Gfs*24|1|0.1|ENSG00000204469|chr6:31634300-31634301|-/G|frameshift_variant;PRRC2A|p.G1731Wfs*35|1|0.59|ENSG00000204469|chr6:31635155-31635156|-/C|frameshift_variant;PRRC2A|p.G1884Afs*12|1|0.18|ENSG00000204469|chr6:31636228-31636228|C/-|frameshift_variant;PRRC2A|p.K1685Rfs*9|1|0.21|ENSG00000204469|chr6:31634864-31634864|C/-|frameshift_variant;PRRC2A|p.R284Vfs*14|1|0.17|ENSG00000204469|chr6:31626023-31626023|T/-|frameshift_variant;PRRC2A|p.R477Afs*94|1|0.28|ENSG00000204469|chr6:31627901-31627901|G/-|frameshift_variant;PRRC2A|p.T807Nfs*10|1|0.5|ENSG00000204469|chr6:31630754-31630755|-/A|frameshift_variant	60.97194046774394	0.3570005369683776	2				NaN	NaN	0	NaN	8954	3847	12799
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12804	34.386	NaN	10876	30	0	2009.2	0.106			+	28590	NKKVTALIV	9	79	493.3240659412349	984.6335789492698	2	493.3257751464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NKKVTALIV_	REV__ENST00000511516.5_1_5:39003663-39003717:-|nuORF	76.7741389293348	0.11149722112137898	2				NaN	NaN	0	NaN	8955	3847	12799
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12805	34.388	NaN	6016.7	30	0	2080.9	0.106	+			32647	QYVTQINRL	9	74	567.817484995997	1133.620417058794	2	567.817138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QYVTQINRL_	ENSG00000124126|ENST00000371941|PREX1;nc|ENSG00000124126|Q8TCU6-2|PREX1;nc|ENSG00000124126|Q8TCU6-3|PREX1	67.49366992349736	0.1516260258713357	2				NaN	NaN	0	NaN	8956	3847	12799
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12806	34.39	NaN	3684.6	30	0	385.06	0.034	+			47013	VKYDSSLR	8	61	484.2638725279756	966.5131921227512	2	484.26373291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VKYDSSLR_	CA13|p.L149Yfs*65|1|0.26|ENSG00000185015|chr8:85266695-85266695|T/-|frameshift_variant;ENSG00000185015|ENST00000321764|CA13;ENST00000517298.5_1_8:86163045-86179484:+|nuORF	37.81151784470057	0.6698925118251505	2				NaN	NaN	0	NaN	8957	3847	12799
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12820	34.419	NaN	17556	30	0	8196.5	0.214	+			6671	AYVHMVTHF	9	70	368.8481767268375	1103.5227007807125	3	368.8479919433594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AYVHMVTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	40.5726180659479	0.4135428067754104	2				NaN	NaN	0	NaN	8968	3850	12819
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12821	34.423	NaN	15262	30	0	5002	0.106			+	17408	IARQWAQI	8	80	493.2821126832682	984.5496724333365	2	493.2817077636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IARQWAQI_	REV__ENSG00000119714|ENST00000650645|GPR68	79.9392285194092	0.32408006123154964	2				NaN	NaN	0	NaN	8969	3850	12819
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12822	34.425	NaN	14162	30	0	4291.5	0.106			+	16717	HLEVEPERTK	10	81	619.329838360135	1236.64512378707	2	619.3297119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HLEVEPERTK_	REV__ENSG00000131379|ENST00000253697|C3orf20;REV__nc|nan|Q8ND61-2|C3orf20	47.95952297671804	0.47580206326914537	2				NaN	NaN	0	NaN	8970	3850	12819
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12823	34.427	NaN	5476	30	0	711.88	0.106	+			50963	YIHVGAQL	8	65	450.75044392955203	899.4863349259041	2	450.75	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YIHVGAQL_	ENSG00000176658|ENST00000318217|MYO1D	65.89745868150666	0.44339748671293633	2				NaN	NaN	0	NaN	8971	3850	12819
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12824	34.428	NaN	5900.9	30	0	828.02	0.106			+	25211	LMLHNEDGI	9	72	521.2551870855987	1040.4958212379972	2	521.2554931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LMLHNEDGI_	REV__ENSG00000077943|ENST00000378076|ITGA8	53.351449002276354	0.2690372970092375	2				NaN	NaN	0	NaN	8972	3850	12819
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12825	34.43	NaN	10884	30	0	3213.4	0.038	+			19088	IYIKQIKTF	9	60	385.2374139797119	1152.6904125393357	3	385.2375183105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IYIKQIKTF_	ENSG00000103479|ENST00000262133|RBL2	51.19269402634007	0.2889735674168909	2				NaN	NaN	0	NaN	8973	3850	12819
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12826	34.431	NaN	10465	30	0	1509.5	0.142	+			19089	IYIKQIKTF	9	76	577.3530400676336	1152.6915272020672	2	577.3529052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IYIKQIKTF_	ENSG00000103479|ENST00000262133|RBL2	181.4070731898895	0.0011547877412507563	2				NaN	NaN	0	NaN	8974	3850	12819
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12837	34.458	NaN	26947	30	0	2174	0.214				-1	 	0	94	532.8398350721404	1063.6651172110808	2	532.83984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	8982	3853	12836
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12838	34.462	NaN	10942	30	0	2760.8	0.106	+			20458	KEVFNILQ	8	69	495.78398130536874	989.5534096775375	2	497.2841491699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEVFNILQ_	ENSG00000105976|ENST00000397752|MET;nc|ENSG00000105976|P08581-2|MET;nc|ENSG00000105976|P08581-3|MET	41.42661286455405	0.6474601000989023	2				NaN	NaN	0	NaN	8983	3853	12836
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12839	34.464	NaN	6754.2	30	0	1696.5	0.106			+	36146	SEKTILIR	8	66	480.29764033627646	958.5807277393529	2	480.297607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEKTILIR_	REV__ENSG00000011454|ENST00000373647|RABGAP1;REV__nc|ENSG00000188394|Q9Y3P9-2|RABGAP1	71.87747018426188	0.391254423828572	2				NaN	NaN	0	NaN	8984	3853	12836
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12840	34.466	NaN	6290.9	30	0	1410.5	0.106				-1	ASTKKVVMK	9	62	336.534227507259	NaN	0	336.53424072265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_ASTKKVVM(Oxidation (M))K_	CFAP47|p.F1567Vfs*4|1|0.31|ENSG00000165164|chrX:36098829-36098830|-/G|frameshift_variant;CFAP47|p.H2345Afs*15|1|0.09|ENSG00000165164|chrX:36236809-36236810|-/A|frameshift_variant;CFAP47|p.K734Nfs*6|1|0.13|ENSG00000165164|chrX:35971909-35971909|A/-|frameshift_variant;CFAP47|p.P2326Tfs*34|1|0.26|ENSG00000165164|chrX:36236751-36236752|-/A|frameshift_variant;ENSG00000165164|ENST00000378653|CFAP47;nc|ENSG00000165164|Q6ZTR5-1|CFAP47;nc|ENSG00000165164|Q6ZTR5-2|CFAP47;nc|ENSG00000165164|Q6ZTR5-6|CFAP47	23.52269567125451	0.3573684076213556	2				NaN	NaN	0	NaN	8985	3853	12836
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12841	34.468	NaN	5892.8	30	0	370.06	0.106				-1	KDECSMLKL	9	79	541.7661185421738	1081.5176841511475	2	541.7691650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_KDECSM(Oxidation (M))LKL_	ENSG00000184305|ENST00000509176|CCSER1	52.936696900407355	0.27249468807391813	2				NaN	NaN	0	NaN	8986	3853	12836
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12842	34.469	NaN	4229	30	0	527.53	0.106			+	27083	MALLSGSEV	9	56	453.7344735052271	905.4543940772542	2	453.7319030761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MALLSGSEV_	REV__ENSG00000279012|ENST00000624187|OR51B2;REV__OR51B2|p.S163Ffs*27|1|0.38|ENSG00000279012|chr11:5323810-5323811|-/A|frameshift_variant	53.351449002276354	0.2690372970092375	2				NaN	NaN	0	NaN	8987	3853	12836
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12843	34.471	NaN	4216	30	0	469.23	0.033	+			50964	YIHVGAQL	8	64	450.75044392955203	899.4863349259041	2	450.75006103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YIHVGAQL_	ENSG00000176658|ENST00000318217|MYO1D	54.76467175910256	0.5536104764165384	2				NaN	NaN	0	NaN	8988	3853	12836
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12856	34.498	NaN	7908	30	0	847.43	0.215	+			7886	DRQQLPAFL	9	80	544.2987866878443	1086.5830204424885	2	544.298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DRQQLPAFL_	ENSG00000105523|ENST00000263266|FAM83E;FAM83E|p.Q297Pfs*33|1|0.38|ENSG00000105523|chr19:48603780-48603781|-/G|frameshift_variant;FAM83E|p.Q297Rfs*6|1|0.48|ENSG00000105523|chr19:48603781-48603781|G/-|frameshift_variant	49.44154591367651	0.3095138337212152	2				NaN	NaN	0	NaN	8998	3856	12855
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12857	34.502	NaN	6945	30	0	522.87	0.106	+			4452	ATIMGVRFK	9	70	511.79449927225204	1021.5744456113041	2	511.7941589355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATIMGVRFK_	ENSG00000096092|ENST00000211314|TMEM14A	51.52775601994872	0.28504342437107444	2				NaN	NaN	0	NaN	8999	3856	12855
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12858	34.504	NaN	4280.8	30	0	525.56	0.106	+			6497	AWPEPILSL	9	69	513.2851182031155	1024.555683473031	2	513.285400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AWPEPILSL_	CATSPER4|p.K467Nfs*78|1|0.36|ENSG00000188782|chr1:26202519-26202519|A/-|frameshift_variant	37.15910966729921	0.4535818937225704	2				NaN	NaN	0	NaN	9000	3856	12855
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12859	34.506	NaN	4625.8	30	0	695.56	0.106	+			4862	ATPPVTPALT	10	64	484.27569229810575	966.5368316630115	2	484.7747802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATPPVTPALT_	ENST00000505141.5_1_4:175896558-175896660:+|nuORF	35.61828744233558	0.588957954432594	2				NaN	NaN	0	NaN	9001	3856	12855
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12860	34.508	NaN	3718.2	30	0	454.06	0.106	+			9033	EGEKVRGLY	9	67	525.7833223062823	1049.5520916793646	2	525.78369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EGEKVRGLY_	ENSG00000155026|ENST00000404406|RSPH10B;ENSG00000169402|ENST00000404077|RSPH10B2	44.116797842482775	0.37197099687881774	2				NaN	NaN	0	NaN	9002	3856	12855
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12861	34.509	NaN	5099.6	30	0	661.77	0.106	+			50839	YETPTGIKV	9	71	504.27430835101484	1006.5340637688297	2	504.274169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YETPTGIKV_	ENSG00000170043|ENST00000303731|TRAPPC1	66.42927471994793	0.16001998865088202	2				NaN	NaN	0	NaN	9003	3856	12855
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12862	34.511	NaN	3819.2	30	0	426.21	0.034	+			47497	VQHGAVYSL	9	64	487.2591042416196	972.5036555500392	2	487.25921630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VQHGAVYSL_	ENSG00000143751|ENST00000272091|SDE2	40.77816245573522	0.41113185337114944	2				NaN	NaN	0	NaN	9004	3856	12855
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12875	34.538	NaN	43061	30	0	9856.4	0.214	+			4191	ATFPLSVQK	9	83	495.78398130536874	989.5534096775375	2	495.7843933105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATFPLSVQK_	ENSG00000110367|ENST00000534980|DDX6	200.56263349563793	3.093786480258617E-05	2				NaN	NaN	0	NaN	9014	3859	12874
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12876	34.542	NaN	28088	30	0	4454	0.106	+			873	AEHFLEQQM	9	81	566.7582423348733	1131.5019317365466	2	566.7586669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEHFLEQQM_	CCT3|p.A379Lfs*9|1|0.21|ENSG00000163468|chr1:156312061-156312061|C/-|frameshift_variant;CCT3|p.K197Nfs*23|1|0.17|ENSG00000163468|chr1:156320857-156320857|T/-|frameshift_variant;CCT3|p.L350Ffs*9|1|0.49|ENSG00000163468|chr1:156312146-156312147|-/A|frameshift_variant;ENSG00000163468|ENST00000295688|CCT3;nc|ENSG00000163468|P49368-2|CCT3	131.61620852596164	0.014413238321579053	2				NaN	NaN	0	NaN	9015	3859	12874
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12877	34.544	NaN	12155	30	0	980.12	0.106	+			39642	STIEYVIQR	9	76	554.803127509496	1107.591702085792	2	554.8037719726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STIEYVIQR_	ENSG00000101310|ENST00000650089|SEC23B	136.26810882979174	0.012230845423532208	2				NaN	NaN	0	NaN	9016	3859	12874
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12878	34.546	NaN	8427.9	30	0	1958.5	0.106	+			14897	GTLSSYIVK	9	70	484.27569229810575	966.5368316630115	2	484.2763366699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTLSSYIVK_	ENSG00000082068|ENST00000265107|WDR70	115.49404669440601	0.023927554121326553	2				NaN	NaN	0	NaN	9017	3859	12874
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12879	34.548	NaN	6542.4	30	0	783.29	0.106	+			1266	AESEKWQQAL	10	78	595.2961393898136	1188.577725846427	2	595.296142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AESEKWQQAL_	ENSG00000197170|ENST00000356126|PSMD12;ENST00000584289.5_1_17:65341859-65362635:-|nuORF;nc|ENSG00000197170|O00232-2|PSMD12	88.17693792209575	0.14151128060301246	2				NaN	NaN	0	NaN	9018	3859	12874
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12880	34.549	NaN	6529.4	30	0	1226.3	0.106	+			36372	SETEYVIRC	9	73	550.2584251285876	1098.5022973239752	2	550.2587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SETEYVIRC_	ENSG00000181789|ENST00000314797|COPG1	71.87747018426188	0.13267044672804276	2				NaN	NaN	0	NaN	9019	3859	12874
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12881	34.551	NaN	5350.5	30	0	584.34	0.035	+			49767	VYQHGLTGF	9	74	511.2587788916655	1020.503004850131	2	511.25872802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VYQHGLTGF_	ENSG00000030110|ENST00000374467|BAK1	79.45101966838831	0.09992237243120712	2				NaN	NaN	0	NaN	9020	3859	12874
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12892	34.577	NaN	10331	30	0	968.76	0.214	+			41283	SVLLFVTKK	9	86	517.8342208057803	1033.6538886783605	2	517.8341674804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVLLFVTKK_	ENSG00000198231|ENST00000389924|DDX42;ENST00000578593.1_1_17:61889231-61895755:+|nuORF;nc|ENSG00000198231|Q86XP3-2|DDX42	99.01295224348159	0.040209060045561164	2				NaN	NaN	0	NaN	9028	3862	12891
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12893	34.581	NaN	9290.1	30	0	455.44	0.106	+			13860	GQWKKGFVL	9	79	531.8086940375671	1061.602835141934	2	531.8087768554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GQWKKGFVL_	ENSG00000142864|ENST00000361219|SERBP1;ENST00000484880.1_1_1:67885652-67890638:-|nuORF;nc|ENSG00000142864|Q8NC51-2|SERBP1;nc|ENSG00000142864|Q8NC51-4|SERBP1;nc|ENSG00000142864|Q8NC51|SERBP1	68.78682469695295	0.14603441672067394	2				NaN	NaN	0	NaN	9029	3862	12891
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12894	34.583	NaN	5869.3	30	0	563.36	0.106	+			39883	STLQVGSLNVK	11	70	573.3305105922436	1144.6464682512872	2	573.3301391601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STLQVGSLNVK_	ENSG00000063854|ENST00000397356|HAGH;ENST00000569700.5_1_16:1869077-1876788:-|nuORF;nc|ENSG00000063854|Q16775-2|HAGH	52.167168403610894	0.39337392184041037	2				NaN	NaN	0	NaN	9030	3862	12891
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12895	34.584	NaN	2673.9	30	0	308.19	0.106				-1	 	0	55	402.75832341477957	803.5020938963592	2	402.7581787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9031	3862	12891
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12896	34.586	NaN	3913.8	30	0	634.67	0.106	+			11265	FIQAVRQTL	9	72	538.316698045466	1074.6188431577318	2	538.3167114257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FIQAVRQTL_	ENSG00000135778|ENST00000366628|NTPCR;ENST00000487953.1_1_1:233091430-233112053:+|nuORF;ENST00000494689.5_1_1:233086425-233113974:+|nuORF	55.08391021199286	0.2545954270840753	2				NaN	NaN	0	NaN	9032	3862	12891
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12897	34.588	NaN	3079.1	30	0	226.69	0.106	+			33148	RESQDTSFTTL	11	63	642.8063669521619	1283.5981809711236	2	642.8067016601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RESQDTSFTTL_	ENSG00000198380|ENST00000357308|GFPT1;nc|ENSG00000198380|Q06210-2|GFPT1	31.634271133179894	0.6579734920221648	2				NaN	NaN	0	NaN	9033	3862	12891
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12898	34.59	NaN	2970.7	30	0	444	0.035	+			45192	TVNKGDTAVL	10	57	509.2820810714459	NaN	0	509.28240966796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TVNKGDTAVL_	ENSG00000066056|ENST00000372476|TIE1;nc|ENSG00000066056|P35590-2|TIE1;nc|ENSG00000066056|P35590-3|TIE1;TIE1|p.F1100Lfs*8|1|0.5|ENSG00000066056|chr1:43321662-43321662|C/-|frameshift_variant;TIE1|p.P248Lfs*117|2|0.42|ENSG00000066056|chr1:43307239-43307239|C/-|frameshift_variant;TIE1|p.R648Dfs*15|1|0.25|ENSG00000066056|chr1:43313144-43313144|C/-|frameshift_variant	28.081489160057373	0.40797012399963245	2				NaN	NaN	0	NaN	9034	3862	12891
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12911	34.618	NaN	20085	30	0	5794.6	0.214	+			4636	ATLPPITVTSK	11	73	564.3372355618601	1126.65991819052	2	564.337646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATLPPITVTSK_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	68.62578634547417	0.24719609611953774	2				NaN	NaN	0	NaN	9044	3865	12910
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12912	34.621	NaN	5453.1	30	0	1005.9	0.106	+			23990	LEAAGIGKL	9	67	436.2662220602298	870.5178911872596	2	436.2659912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LEAAGIGKL_	ANKRD17|p.K886Sfs*4|1|0.39|ENSG00000132466|chr4:73139959-73139959|T/-|frameshift_variant;ANKRD17|p.L2249Yfs*84|1|0.34|ENSG00000132466|chr4:73090884-73090884|G/-|frameshift_variant;ENSG00000131503|ENST00000360839|ANKHD1;ENSG00000132466|ENST00000358602|ANKRD17;nc|ENSG00000131503|Q8IWZ3-2|ANKHD1;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;nc|ENSG00000131503|Q8IWZ3-5|ANKHD1;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1;nc|ENSG00000132466|O75179-2|ANKRD17;nc|ENSG00000132466|O75179-3|ANKRD17;nc|ENSG00000132466|O75179-4|ANKRD17;nc|ENSG00000132466|O75179-5|ANKRD17;nc|ENSG00000132466|O75179-6|ANKRD17;nc|ENSG00000132466|O75179-7|ANKRD17	107.00750918261382	0.032051501805654005	2				NaN	NaN	0	NaN	9045	3865	12910
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12913	34.623	NaN	4638	30	0	523.91	0.106	+			13458	GLKAGALA	8	61	350.7210115540963	699.4274701749927	2	350.7212829589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GLKAGALA_	ENSG00000105851|ENST00000496166|PIK3CG	21.70233525837049	0.7917639344264583	2				NaN	NaN	0	NaN	9046	3865	12910
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12914	34.625	NaN	4814	30	0	927.9	0.106	+			50324	WTLTSRIRQ	9	66	580.8307105448647	1159.6468681565293	2	580.8299560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_WTLTSRIRQ_	ENST00000338087.9_1_8:134049010-134049184:-|nuORF	58.78195531508484	0.22376836668196862	2				NaN	NaN	0	NaN	9047	3865	12910
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12915	34.627	NaN	5381.9	30	0	901.71	0.106	+			44472	TSQPFQVLK	9	65	524.2954945882357	1046.5764362432712	2	524.2955932617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TSQPFQVLK_	ENSG00000122008|ENST00000241436|POLK;nc|ENSG00000122008|Q9UBT6-3|POLK;nc|ENSG00000122008|Q9UBT6-8|POLK	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	9048	3865	12910
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12916	34.629	NaN	3808	30	0	331.44	0.106			+	-1	MVSNAMRFMK	10	70	631.7892312413114	1261.5639095494228	2	631.7900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	3 Oxidation (M)	_M(Oxidation (M))VSNAM(Oxidation (M))RFM(Oxidation (M))K_	REV__ENST00000506123.5_1_5:54461320-54461404:+|nuORF	52.936696900407355	0.4300801048568001	2				NaN	NaN	0	NaN	9049	3865	12910
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12917	34.631	NaN	3495.3	30	0	650.68	0.034				-1	KGFCQVVI	8	65	475.759570303974	949.504587674748	2	475.7596435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_KGFC(Carbamidomethyl (C))QVVI_	ENSG00000124140|ENST00000243964|SLC12A5;nc|ENSG00000124140|Q9H2X9|SLC12A5;SLC12A5|p.E1019Kfs*40|1|0.54|ENSG00000124140|chr20:46056436-46056436|G/-|frameshift_variant	44.53106598305862	0.628196326904373	2				NaN	NaN	0	NaN	9050	3865	12910
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12929	34.657	NaN	6210.3	30	0	486.19	0.214	+			6674	AYVHMVTHF	9	68	552.7682709412602	1103.5219889493203	2	552.7693481445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AYVHMVTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	97.47269410471826	0.04379738608259218	2				NaN	NaN	0	NaN	9059	3868	12928
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12930	34.66	NaN	6570.2	30	0	1422.9	0.106	+			12182	GANSLFLEK	9	66	489.765449321719	977.516345710238	2	489.76611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GANSLFLEK_	ENSG00000183864|ENST00000327492|TOB2	109.43880257439609	0.029570636687953285	2				NaN	NaN	0	NaN	9060	3868	12928
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12931	34.662	NaN	5955.6	30	0	451.19	0.106				-1	 	0	76	619.2935576273516	618.2862811607515	1	619.2940063476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9061	3868	12928
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12932	34.664	NaN	3106.1	30	0	347.89	0.106	+			15762	GVSTAKNI	8	57	395.22695565878325	788.4393583843665	2	395.2267150878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GVSTAKNI_	ENSG00000166454|ENST00000299575|ATMIN;nc|ENSG00000166454|O43313-2|ATMIN	37.15910966729921	0.6739408393984688	2				NaN	NaN	0	NaN	9062	3868	12928
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12933	34.666	NaN	4494.5	30	0	313.71	0.106			+	29441	PCIHKDKM	8	69	514.7555691041287	1027.4965852750572	2	514.755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_PC(Carbamidomethyl (C))IHKDKM_	REV__ENST00000370620.5_1_X:135749294-135749660:-|nuORF	45.9519527083369	0.6193794311207887	2				NaN	NaN	0	NaN	9063	3868	12928
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12934	34.668	NaN	3119.7	30	0	506.19	0.106			+	12783	GELSQVLSL	9	57	473.2657128311681	NaN	0	473.2657775878906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GELSQVLSL_	REV__ENSG00000255181|ENST00000542437|CCDC166	52.936696900407355	0.1864545979552969	2				NaN	NaN	0	NaN	9064	3868	12928
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12935	34.669	NaN	4023.8	30	0	934.07	0.037				-1	AYVHMVTHF	9	64	374.1794477134007	1119.5165137404022	3	374.17974853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_AYVHM(Oxidation (M))VTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	29.14955571784316	0.5308295550522326	2				NaN	NaN	0	NaN	9065	3868	12928
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12947	34.696	NaN	47745	30	0	20490	0.214	+			49887	VYTSGVYHI	9	94	519.7666143864953	1037.5186758397906	2	519.7667236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYTSGVYHI_	ENSG00000111077|ENST00000314250|TNS2;ENST00000549311.7_1_12:53443879-53456445:+|nuORF;nc|ENSG00000111077|Q63HR2-2|TNS2;nc|ENSG00000111077|Q63HR2-4|TNS2;nc|ENSG00000111077|Q63HR2-5|TNS2;nc|ENSG00000111077|Q63HR2-6|TNS2;TNS2|p.G362Rfs*43|1|0.33|ENSG00000111077|chr12:53058087-53058088|-/A|frameshift_variant;TNS2|p.K660Nfs*96|1|0.2|ENSG00000111077|chr12:53059615-53059615|G/-|frameshift_variant;TNS2|p.P495Rfs*25|2|0.33|ENSG00000111077|chr12:53059119-53059119|C/-|frameshift_variant	148.20599733432147	0.007287282186870133	2				NaN	NaN	0	NaN	9074	3871	12946
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12948	34.699	NaN	26997	30	0	3510.3	0.106	+			49534	VYANGQHLF	9	75	524.7645612575883	1047.5145695819765	2	524.7643432617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYANGQHLF_	ENSG00000171747|ENST00000307751|LGALS4	157.98928361386217	0.005006955008209645	2				NaN	NaN	0	NaN	9075	3871	12946
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12949	34.701	NaN	12378	30	0	1312.3	0.106			+	23400	LAALFFYH	8	80	491.26340982617614	980.5122667191523	2	491.2621154785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LAALFFYH_	REV__ADGRL4|p.F505L|1|0.29|ENSG00000162618|chr1:78917999-78917999|A/G|missense_variant	67.3271909547111	0.42924334279516513	2				NaN	NaN	0	NaN	9076	3871	12946
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12950	34.703	NaN	6425.8	30	0	1233.8	0.106	+			42310	TAFENAYLK	9	73	528.7718345634026	1055.5291161936052	2	528.77197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TAFENAYLK_	ATM|p.C1838Vfs*8|1|0.42|ENSG00000149311|chr11:108304687-108304687|T/-|frameshift_variant;ATM|p.G1642Wfs*23|1|0.78|ENSG00000149311|chr11:108297299-108297300|-/T|frameshift_variant;ATM|p.G2425Vfs*15|1|0.33|ENSG00000149311|chr11:108329204-108329204|G/-|frameshift_variant;ATM|p.I1581Sfs*20|1|0.25|ENSG00000149311|chr11:108293437-108293437|A/-|frameshift_variant;ATM|p.K1170Nfs*11|1|0.26|ENSG00000149311|chr11:108281098-108281098|A/-|frameshift_variant;ATM|p.K2303Rfs*7|2|0.24|ENSG00000149311|chr11:108326153-108326153|A/-|frameshift_variant;ATM|p.K2413Tfs*11|1|0.06|ENSG00000149311|chr11:108329168-108329169|-/CAACCAATTTAAATTAT|frameshift_variant;ATM|p.K2811Sfs*46|1|0.34|ENSG00000149311|chr11:108345750-108345750|A/-|frameshift_variant;ATM|p.L2231Wfs*4|1|0.52|ENSG00000149311|chr11:108325426-108325426|T/-|frameshift_variant;ATM|p.P1587Ffs*13|1|0.08|ENSG00000149311|chr11:108293459-108293462|ACCC/-|frameshift_variant;ATM|p.R1973Efs*17|1|0.26|ENSG00000149311|chr11:108310311-108310311|A/-|frameshift_variant;ATM|p.T1609*|1|0.23|ENSG00000149311|chr11:108294972-108294973|-/TG|frameshift_variant;ATM|p.V1446Cfs*2|1|0.25|ENSG00000149311|chr11:108289697-108289698|-/T|frameshift_variant;ENSG00000149311|ENST00000675843|ATM	47.95952297671804	0.32689736945648856	2				NaN	NaN	0	NaN	9077	3871	12946
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12951	34.705	NaN	7769.5	30	0	654.97	0.106	+			35833	SEDDVKMAL	9	75	504.23941374405376	1006.4642745549075	2	504.2392272949219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SEDDVKMAL_	ENSG00000169813|ENST00000682386|HNRNPF	95.81516180277367	0.04847050768394289	2				NaN	NaN	0	NaN	9078	3871	12946
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12952	34.707	NaN	5007.1	30	0	2019	0.106	+			15918	HACGVIATI	9	66	442.73642588837794	883.4582988435559	2	442.7363586425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HACGVIATI_	ENSG00000183726|ENST00000374358|TMEM50A;ENST00000480937.5_1_1:25666968-25687193:+|nuORF	68.484700416344	0.1473408039581241	2				NaN	NaN	0	NaN	9079	3871	12946
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12953	34.708	NaN	3651.9	30	0	275.51	0.034			+	47433	VPSTANQLS	9	64	458.73970846582887	915.4648639984578	2	458.74041748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VPSTANQLS_	REV__ENSG00000132164|ENST00000254488|SLC6A11;REV__nc|ENSG00000132164|P48066-2|SLC6A11;REV__SLC6A11|p.F358Lfs*31|1|0.55|ENSG00000132164|chr3:10918404-10918404|T/-|frameshift_variant	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	9080	3871	12946
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12967	34.738	NaN	18755	30	0	3370.6	0.214	+			15748	GVSLMTVPK	9	70	466.2675784390238	930.5206039448476	2	466.2673034667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVSLMTVPK_	ENST00000284202.8_1_18:22006682-22007982:+|nuORF	124.08010499294276	0.018729767491916592	2				NaN	NaN	0	NaN	9091	3874	12966
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12968	34.741	NaN	7703.3	30	0	721.4	0.106	+			10583	EYISTVKTL	9	75	527.2952042098517	1052.5758554865033	2	527.2949829101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EYISTVKTL_	ENSG00000168395|ENST00000313552|ING5;ENST00000482774.5_1_2:242641480-242659534:+|nuORF;ENST00000489509.1_1_2:242641480-242659033:+|nuORF;ENST00000492488.5_1_2:242641480-242651487:+|nuORF;ING5|p.A46V|1|0.39|ENSG00000168395|chr2:241709243-241709243|C/T|missense_variant;ING5|p.G142Afs*58|1|0.38|ENSG00000168395|chr2:241712011-241712011|G/-|frameshift_variant;nc|ENSG00000168395|Q8WYH8-2|ING5	120.8684288430529	0.02067403653475984	2				NaN	NaN	0	NaN	9092	3874	12966
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12969	34.743	NaN	5945.1	30	0	616.95	0.106	+			40171	STQSLPRL	8	55	451.25788586181005	900.5012187904201	2	451.2580261230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STQSLPRL_	FAM47C|p.E672Rfs*153|1|0.71|ENSG00000198173|chrX:37010418-37010418|C/-|frameshift_variant;FAM47C|p.K504Rfs*321|1|0.71|ENSG00000198173|chrX:37009914-37009914|C/-|frameshift_variant;FAM47C|p.P200Rfs*625|3|0.21|ENSG00000198173|chrX:37009004-37009004|C/-|frameshift_variant;FAM47C|p.P200Rfs*625|3|0.21|ENSG00000198173|chrX:37009004-37009004|C/-|frameshift_variant;FAM47C|p.P200Rfs*625|3|0.21|ENSG00000198173|chrX:37009004-37009004|C/-|frameshift_variant;FAM47C|p.P596Rfs*229|1|0.19|ENSG00000198173|chrX:37010192-37010192|C/-|frameshift_variant	51.33545320467046	0.5859736979383976	2				NaN	NaN	0	NaN	9093	3874	12966
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12970	34.745	NaN	15044	30	0	1569.2	0.106	+			47404	VPNKVIQCF	9	92	552.7969486485603	1103.5793443639204	2	552.797119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_VPNKVIQC(Carbamidomethyl (C))F_	CLTC|p.A1374*|1|0.05|ENSG00000141367|chr17:59683464-59683465|-/TA|frameshift_variant;CLTC|p.D632Yfs*7|1|0.15|ENSG00000141367|chr17:59666589-59666590|-/TTACA|frameshift_variant;ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000141367|Q00610-2|CLTC	90.77665401227738	0.06267569666681755	2				NaN	NaN	0	NaN	9094	3874	12966
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12971	34.747	NaN	5190.2	30	0	362.51	0.106	+			27964	MVLECLKSPK	10	75	574.3145361779907	1146.6145194227813	2	574.314208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MVLECLKSPK_	ENST00000246957.9_1_16:3726078-3727601:-|nuORF	58.22992032128504	0.38193887838457763	2				NaN	NaN	0	NaN	9095	3874	12966
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12972	34.749	NaN	3586.4	30	0	333	0.035			+	22487	KTNGAFAKY	9	70	500.2667500564514	998.5189471797028	2	500.26654052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KTNGAFAKY_	REV__ENSG00000080224|ENST00000389672|EPHA6;REV__EPHA6|p.S388Y|1|0.19|ENSG00000080224|chr3:97226312-97226312|C/A|missense_variant;REV__nc|ENSG00000080224|Q9UF33|EPHA6	47.657333605630114	0.33044192980041115	2				NaN	NaN	0	NaN	9096	3874	12966
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12973	34.749	NaN	3362.3	30	0	267.96	0.139			+	34150	RSWRQGSP	8	66	487.25102782096536	972.4875027087307	2	487.2509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RSWRQGSP_	REV__ENST00000420902.1_1_22:50006877-50007000:-|nuORF	47.657333605630114	0.6087971902037268	2				NaN	NaN	0	NaN	9097	3874	12966
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12985	34.777	NaN	13273	30	0	2568.7	0.214	+			49925	VYVERAEVL	9	74	539.3006550370268	1076.5867571408535	2	539.3009033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYVERAEVL_	ENSG00000089234|ENST00000419234|BRAP	78.26377905018397	0.10505600812668463	2				NaN	NaN	0	NaN	9106	3877	12984
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12986	34.781	NaN	8227.4	30	0	1395.5	0.106	+			17024	HPVFQQESF	9	72	559.7668085761036	1117.519064219007	2	559.7675170898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HPVFQQESF_	ENSG00000170430|ENST00000651593|MGMT	139.97047562133406	0.010493916756945389	2				NaN	NaN	0	NaN	9107	3877	12984
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12987	34.783	NaN	6568.5	30	0	541.02	0.106	+			2657	AQMEGFLNR	9	77	533.2612315388856	1064.507910144571	2	533.2616577148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AQMEGFLNR_	ENSG00000115306|ENST00000356805|SPTBN1	85.86182877749512	0.07653218437724067	2				NaN	NaN	0	NaN	9108	3877	12984
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12988	34.784	NaN	6037.6	30	0	2427.2	0.106			+	6521	AYDGNLHTIT	10	59	368.8481767268375	1103.5227007807125	3	368.8479919433594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AYDGNLHTIT_	REV__CDH4|p.R666H|1|0.12|ENSG00000179242|chr20:61928415-61928415|G/A|missense_variant	33.921630207806714	0.6028135429846169	2				NaN	NaN	0	NaN	9109	3877	12984
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12989	34.786	NaN	4439.1	30	0	442.4	0.106			+	11371	FLIPDHSL	8	64	471.2583890674777	940.5022252017554	2	471.25799560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FLIPDHSL_	REV__ENSG00000125676|ENST00000245838|THOC2;REV__THOC2|p.L784Ffs*4|1|0.3|ENSG00000125676|chrX:123631817-123631818|-/A|frameshift_variant	40.5726180659479	0.6527593143185008	2				NaN	NaN	0	NaN	9110	3877	12984
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12990	34.788	NaN	4563.9	30	0	344.09	0.106	+			28849	NPVEDKDAVAF	11	78	602.7965229232079	1203.5784929132158	2	602.7962036132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NPVEDKDAVAF_	CEACAM6|p.I217Mfs*11|3|0.07|ENSG00000086548|chr19:41761474-41761475|-/G|frameshift_variant;ENSG00000079385|ENST00000161559|CEACAM1;ENSG00000086548|ENST00000199764|CEACAM6;ENSG00000124469|ENST00000244336|CEACAM8;ENST00000344391.9_1_19:43023158-43032553:-|nuORF;ENST00000377806.7_1_19:43023094-43032607:-|nuORF;ENST00000403136.1_1_19:43025413-43032607:-|nuORF;nc|ENSG00000079385|P13688-10|CEACAM1;nc|ENSG00000079385|P13688-11|CEACAM1;nc|ENSG00000079385|P13688-2|CEACAM1;nc|ENSG00000079385|P13688-3|CEACAM1;nc|ENSG00000079385|P13688-4|CEACAM1;nc|ENSG00000079385|P13688-5|CEACAM1;nc|ENSG00000079385|P13688-6|CEACAM1;nc|ENSG00000079385|P13688-8|CEACAM1;nc|ENSG00000079385|P13688-9|CEACAM1	90.14881205920913	0.09816545110109878	2				NaN	NaN	0	NaN	9111	3877	12984
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	12991	34.79	NaN	3610.1	30	0	382.34	0.035	+			35834	SEDDVKMAL	9	58	504.23941374405376	1006.4642745549075	2	504.74102783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SEDDVKMAL_	ENSG00000169813|ENST00000682386|HNRNPF	51.19269402634007	0.2889735674168909	2				NaN	NaN	0	NaN	9112	3877	12984
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13003	34.816	NaN	13495	30	0	1154.5	0.214	+			6395	AVVGAVVFQK	10	81	509.3082254490571	1016.6018979649142	2	509.3080749511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVVGAVVFQK_	ENSG00000169223|ENST00000303127|LMAN2;ENST00000504071.1_1_5:176759089-176761465:-|nuORF;ENST00000515209.5_1_5:176759089-176761331:-|nuORF	147.69337715509954	0.008905093117104221	2				NaN	NaN	0	NaN	9121	3880	13002
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13004	34.819	NaN	7332.5	30	0	1165.1	0.106			+	14746	GTKEKKIGF	9	64	336.534227507259	NaN	0	336.5341796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTKEKKIGF_	REV__ENSG00000110844|ENST00000548825|PRPF40B;REV__nc|ENSG00000110844|Q6NWY9-2|PRPF40B;REV__nc|ENSG00000110844|Q6NWY9-3|PRPF40B;REV__nc|ENSG00000110844|Q6NWY9|PRPF40B	30.503639358989545	0.3235605894931338	2				NaN	NaN	0	NaN	9122	3880	13002
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13005	34.821	NaN	10166	30	0	1378	0.106	+			12473	GEDNGQRGYLL	11	80	611.2971618207886	1220.579770708377	2	611.296630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEDNGQRGYLL_	ENSG00000018510|ENST00000264167|AGPS	70.39856735676683	0.2324169829117963	2				NaN	NaN	0	NaN	9123	3880	13002
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13006	34.823	NaN	4246.8	30	0	560.26	0.106	+			10151	ESSPAPRLEPT	11	67	592.3014934456354	1182.5884339580707	2	592.301513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ESSPAPRLEPT_	ENST00000264661.3_1_17:40332898-40333183:-|nuORF	41.42661286455405	0.5384226294179143	2				NaN	NaN	0	NaN	9124	3880	13002
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13007	34.825	NaN	2779	30	0	671.89	0.106	+			29975	PPAPAGGL	8	42	340.19215305468	678.36975317616	2	340.19232177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PPAPAGGL_	ENSG00000225556|ENST00000694868|C2CD4D;REV__ENST00000562648.2_1_16:743493-744282:-|nuORF	16.704963439144045	0.7946246187734944	2				NaN	NaN	0	NaN	9125	3880	13002
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13008	34.827	NaN	5836.2	30	0	700.17	0.106				-1	YVLCIIPWI	9	73	588.8290509636639	1175.6435489941277	2	588.8294067382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_YVLC(Carbamidomethyl (C))IIPWI_	ENSG00000070269|ENST00000261556|TMEM260;ENST00000557626.5_1_14:57046563-57082746:+|nuORF;ENST00000557657.5_1_14:57046563-57079004:+|nuORF;nc|ENSG00000070269|Q9NX78-2|TMEM260;nc|ENSG00000070269|Q9NX78-3|TMEM260	39.021493756699265	0.43173687394350213	2				NaN	NaN	0	NaN	9126	3880	13002
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13009	34.829	NaN	3225.9	30	0	450.91	0.031				-1	 	0	58	377.7459133248996	753.4772737165993	2	377.74591064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9127	3880	13002
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13020	34.852	NaN	5903.6	30	0	615.27	0.214	+			25774	LSALKQLLL	9	67	499.8340832386568	997.6536135441136	2	499.8341064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSALKQLLL_	ENSG00000095564|ENST00000265990|BTAF1;nc|ENSG00000095564|O14981-2|BTAF1	79.71258880314673	0.09879134589249085	2				NaN	NaN	0	NaN	9135	3883	13019
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13021	34.856	NaN	7286.1	30	0	605.57	0.106	+			12673	GEIVEKIGV	9	73	472.2760453175823	942.5375377019647	2	472.2763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEIVEKIGV_	ENSG00000186141|ENST00000334163|POLR3C;POLR3C|p.T412Hfs*15|1|0.39|ENSG00000186141|chr1:145839899-145839899|A/-|frameshift_variant	90.60085204095205	0.06317133949006545	2				NaN	NaN	0	NaN	9136	3883	13019
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13022	34.858	NaN	4904.6	30	0	553.16	0.106	+			48744	VTVGVDGTLYK	11	70	576.3193123466914	1150.6240717601827	2	576.3195190429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTVGVDGTLYK_	ENSG00000156515|ENST00000359426|HK1;ENSG00000159399|ENST00000290573|HK2;ENST00000447818.2_1_X:79827372-79827747:-|nuORF;nc|ENSG00000156515|P19367-2|HK1;nc|ENSG00000156515|P19367-3|HK1;nc|ENSG00000156515|P19367-4|HK1	96.66504779109242	0.07148984068916604	2				NaN	NaN	0	NaN	9137	3883	13019
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13023	34.859	NaN	3820.1	30	0	703.97	0.106	+			4239	ATGDMSGLLK	10	65	496.757610932413	991.500668931626	2	496.757568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATGDMSGLLK_	ENSG00000127837|ENST00000248450|AAMP;ENST00000475678.5_1_2:219131145-219134809:-|nuORF;ENST00000489767.5_1_2:219130391-219134818:-|nuORF	56.43379154798735	0.3982744522255666	2				NaN	NaN	0	NaN	9138	3883	13019
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13024	34.861	NaN	4266	30	0	933.45	0.106			+	45385	TVTKVLKPI	9	55	333.5581957040595	997.6527577123784	3	333.5583801269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TVTKVLKPI_	REV__ENST00000597384.1_1_19:7571970-7578873:+|nuORF	26.79610172149135	0.5528238334041078	2				NaN	NaN	0	NaN	9139	3883	13019
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13025	34.863	NaN	3484.6	30	0	263.03	0.106	+			26101	LSNNALITIL	10	62	536.3247495338935	1070.634946134587	2	536.3245849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSNNALITIL_	ENSG00000188993|ENST00000682860|LRRC66;LRRC66|p.E369Rfs*34|1|0.18|ENSG00000188993|chr4:51995917-51995918|-/T|frameshift_variant;LRRC66|p.S621Lfs*6|1|0.25|ENSG00000188993|chr4:51995161-51995161|A/-|frameshift_variant	56.43379154798735	0.3982744522255666	2				NaN	NaN	0	NaN	9140	3883	13019
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13026	34.865	NaN	2630.9	30	0	251	0.036			+	34660	RVRHAEDVN	9	66	548.2846422413756	NaN	0	548.2845458984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RVRHAEDVN_	REV__ENST00000606285.1_1_6:710944-711145:-|nuORF	40.77816245573522	0.2702456086868081	2				NaN	NaN	0	NaN	9141	3883	13019
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13033	34.882	NaN	16722	30	0	2630.3	0.214	+			8693	EEAKNYYK	8	92	522.7542364422078	NaN	0	522.7537231445312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EEAKNYYK_	ENSG00000133104|ENST00000438666|SPART;ENST00000495510.1_1_13:36900679-36920374:-|nuORF;SPG20|p.Q38K|1|0.05|ENSG00000133104|chr13:36335719-36335719|G/T|missense_variant;SPG20|p.T655Rfs*4|1|0.63|ENSG00000133104|chr13:36304402-36304402|G/-|frameshift_variant	55.50420428727701	1.7418937515398478	2				NaN	NaN	0	NaN	9145	3886	13032
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13034	34.886	NaN	9605.6	30	0	2360.2	0.106	+			29095	NTMQQFLQK	9	74	569.2899407739582	1136.5653286147162	2	569.2899780273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NTMQQFLQK_	ENSG00000071859|ENST00000393600|FAM50A	219.56429443429514	1.5172074221325678E-08	2				NaN	NaN	0	NaN	9146	3886	13032
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13035	34.888	NaN	8427.5	30	0	1172.4	0.106	+			12576	GEGVKLQVM	9	62	480.76238390896833	959.5102148847367	2	480.7623596191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEGVKLQVM_	ENSG00000065427|ENST00000302445|KARS1;ENST00000451871.1_1_13:42499863-42500601:+|nuORF;ENST00000566560.5_1_16:75668010-75682538:-|nuORF;nc|ENSG00000065427|Q15046-2|KARS1	95.81516180277367	0.04847050768394289	2				NaN	NaN	0	NaN	9147	3886	13032
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13036	34.89	NaN	7222.4	30	0	1958.1	0.106				-1	MAVELHYEEGS	11	64	640.7770700017174	1279.5395870702348	2	640.7772216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_M(Oxidation (M))AVELHYEEGS_	ENSG00000172375|ENST00000648610|C2CD2L;ENST00000525598.1_1_11:118982915-118984090:+|nuORF;nc|ENSG00000172375|O14523-2|C2CD2L	26.69291269510374	0.70980431218767	2				NaN	NaN	0	NaN	9148	3886	13032
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13037	34.892	NaN	4405.8	30	0	433.54	0.106	+			39643	STIEYVIQR	9	71	554.803127509496	1107.591702085792	2	554.8037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STIEYVIQR_	ENSG00000101310|ENST00000650089|SEC23B	80.45461616416974	0.09558281504443908	2				NaN	NaN	0	NaN	9149	3886	13032
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13038	34.893	NaN	3581.5	30	0	1013.8	0.106			+	23880	LDHIKDLA	8	48	462.7610314980805	923.507510062961	2	462.76043701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LDHIKDLA_	REV__tr|U7SND9|U7SND9_FUSNUSH3bdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01809PE=4SV=1	32.81241826257853	0.7059802730411993	2				NaN	NaN	0	NaN	9150	3886	13032
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13039	34.895	NaN	2270.3	30	0	349.96	0.036			+	43243	TEVTKLQLI	9	46	348.8814552793207	NaN	0	348.8813781738281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TEVTKLQLI_	REV__tr|U7SUB9|U7SUB9_FUSNUROKfamilyproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01370PE=3SV=1	34.172542307311794	0.30503706118289736	2				NaN	NaN	0	NaN	9151	3886	13032
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13051	34.921	NaN	32823	30	0	2157.8	0.214	+			12830	GENKMGQLGL	10	88	523.7689340595572	1045.5233151859143	2	523.76904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GENKMGQLGL_	ENSG00000179051|ENST00000375436|RCC2;ENST00000405832.2_1_6:56297536-56297638:-|nuORF;ENST00000526625.2_1_11:62139723-62139795:+|nuORF;RCC2|p.A423Qfs*56|1|0.13|ENSG00000179051|chr1:17413120-17413120|T/-|frameshift_variant	89.02883481214508	0.13663399911061233	2				NaN	NaN	0	NaN	9160	3889	13050
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13052	34.924	NaN	7346.6	30	0	941.79	0.106			+	13517	GLPVESDNW	9	76	508.73638222080507	1015.4582115084102	2	508.7370910644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GLPVESDNW_	REV__ENST00000488051.1_1_2:220246364-220246484:-|nuORF	29.14955571784316	0.5308295550522326	2				NaN	NaN	0	NaN	9161	3889	13050
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13053	34.926	NaN	5864.7	30	0	548.21	0.106			+	11541	FPGPDGGAVRL	11	72	543.2927478208741	NaN	0	543.2929077148438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FPGPDGGAVRL_	REV__ENST00000574767.5_1_17:78518930-78519083:+|nuORF	58.22992032128504	0.249851176243816	2				NaN	NaN	0	NaN	9162	3889	13050
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13054	34.928	NaN	4190.5	30	0	450.45	0.106	+			11004	FEHDIQAL	8	62	486.742919937881	971.4712869425621	2	486.7430725097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FEHDIQAL_	ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1	37.15910966729921	0.6739408393984688	2				NaN	NaN	0	NaN	9163	3889	13050
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13055	34.93	NaN	5531.7	30	0	443.01	0.106	+			28689	NMILDNHAL	9	77	528.7613867196968	1055.5082205061935	2	528.761474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_NM(Oxidation (M))ILDNHAL_	DNTT|p.K468N|1|0.31|ENSG00000107447|chr10:96335935-96335935|G/T|missense_variant	54.776311868738084	0.25715957988447635	2				NaN	NaN	0	NaN	9164	3889	13050
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13056	34.932	NaN	4493.1	30	0	337.36	0.106			+	18482	ISGDAFRLK	9	62	503.78799015450574	1005.5614273758115	2	503.787841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ISGDAFRLK_	REV__ENSG00000073578|ENST00000264932|SDHA;REV__ENST00000436493.2_1_5:1589388-1594626:-|nuORF;REV__ENST00000505555.5_1_5:218470-251793:+|nuORF;REV__ENST00000515752.5_1_5:236500-256532:+|nuORF;REV__nc|ENSG00000073578|P31040-2|SDHA;REV__nc|ENSG00000073578|P31040-3|SDHA	39.252832667884924	0.4290233611298554	2				NaN	NaN	0	NaN	9165	3889	13050
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13057	34.933	NaN	10786	30	0	2311.7	0.035	+			14573	GTFSKLFGK	9	81	492.779630975066	983.5447090169321	2	492.77880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GTFSKLFGK_	ENSG00000188112|ENST00000341865|C6orf132;nc|nan|Q5T0Z8-2|C6orf132;nc|nan|Q5T0Z8-4|C6orf132	93.5975768576971	0.05472259948179787	2				NaN	NaN	0	NaN	9166	3889	13050
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13069	34.959	NaN	16610	30	0	4199.8	0.214	+			4637	ATLPPITVTSK	11	81	564.3372355618601	1126.65991819052	2	564.3374633789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATLPPITVTSK_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	50.79123845855914	0.4102859592092987	2				NaN	NaN	0	NaN	9175	3892	13068
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13070	34.962	NaN	10119	30	0	1255.6	0.106	+			23995	LEADRMAAL	9	77	495.2578357145761	988.5011184959523	2	495.25750732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LEADRMAAL_	ENSG00000092820|ENST00000367075|EZR	101.25262130126117	0.03792372629710479	2				NaN	NaN	0	NaN	9176	3892	13068
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13071	34.964	NaN	12289	30	0	3633	0.106				-1	CDECGKVFRHS	11	83	669.2888636951344	1336.5631744570687	2	669.28857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_CDEC(Carbamidomethyl (C))GKVFRHS_	ENSG00000204611|ENST00000600228|ZNF616	35.15202426646627	0.6210751305041943	2				NaN	NaN	0	NaN	9177	3892	13068
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13072	34.966	NaN	6126.7	30	0	520.83	0.106	+			33736	RPNDIYVNM	9	86	561.273616845649	1120.532680758098	2	561.2740478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RPNDIYVNM_	ENSG00000172336|ENST00000303151|POP7	56.43379154798735	0.2433427591689151	2				NaN	NaN	0	NaN	9178	3892	13068
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13073	34.968	NaN	5384.2	30	0	348.66	0.106	+			13861	GQWKKGFVL	9	76	531.8086940375671	1061.602835141934	2	531.8084106445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GQWKKGFVL_	ENSG00000142864|ENST00000361219|SERBP1;ENST00000484880.1_1_1:67885652-67890638:-|nuORF;nc|ENSG00000142864|Q8NC51-2|SERBP1;nc|ENSG00000142864|Q8NC51-4|SERBP1;nc|ENSG00000142864|Q8NC51|SERBP1	53.351449002276354	0.2690372970092375	2				NaN	NaN	0	NaN	9179	3892	13068
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13074	34.97	NaN	8123.8	30	0	960.08	0.106	+			12592	GEHIIAGAGEL	11	77	533.7802625623546	1065.545972191509	2	533.7803955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GEHIIAGAGEL_	ENSG00000167658|ENST00000309311|EEF2	68.84614121027924	0.24535906747804975	2				NaN	NaN	0	NaN	9180	3892	13068
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13075	34.972	NaN	2782.6	30	0	389.98	0.033	+			35764	SDYAVKIV	8	63	447.75023202344	893.48591111368	2	447.7499694824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SDYAVKIV_	ENSG00000126457|ENST00000454376|PRMT1;ENST00000525616.1_1_19:50180537-50188241:+|nuORF;nc|ENSG00000126457|Q99873-2|PRMT1;nc|ENSG00000126457|Q99873-3|PRMT1;nc|ENSG00000126457|Q99873-5|PRMT1	73.97473282117947	0.3737790450121076	2				NaN	NaN	0	NaN	9181	3892	13068
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13088	34.999	NaN	11931	30	0	1245	0.214	+			14697	GTIGLALAR	9	69	436.27155798144605	870.5285630296921	2	436.2715148925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTIGLALAR_	ENSG00000099899|ENST00000252136|TRMT2A;ENST00000487668.5_1_22:20100432-20101310:-|nuORF;ENST00000494820.5_1_22:20100432-20103278:-|nuORF;nc|ENSG00000099899|Q8IZ69-2|TRMT2A	148.04295825190792	0.0073252839830139265	2				NaN	NaN	0	NaN	9191	3895	13087
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13089	35.003	NaN	5863.6	30	0	1734.1	0.106			+	29775	PIGFIPNLN	9	61	328.8550565372159	983.5433402118476	3	328.8552551269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PIGFIPNLN_	REV__RALBP1|p.K187N|1|0.09|ENSG00000017797|chr18:9517161-9517161|A/C|missense_variant	25.450171626174864	0.5654022654467333	2				NaN	NaN	0	NaN	9192	3895	13087
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13090	35.005	NaN	8866.3	30	0	1803.7	0.106			+	24160	LELRQTLAL	9	79	528.8244952890367	1055.6344376448733	2	528.82470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LELRQTLAL_	REV__ENSG00000185963|ENST00000356884|BICD2;REV__nc|ENSG00000185963|Q8TD16|BICD2	47.657333605630114	0.33044192980041115	2				NaN	NaN	0	NaN	9193	3895	13087
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13091	35.006	NaN	7646.8	30	0	1069.1	0.106	+			2420	APEEHPVLL	9	67	502.77438005104403	NaN	0	502.7742004394531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_APEEHPVLL_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF	64.20726635412375	0.13137488984569443	2				NaN	NaN	0	NaN	9194	3895	13087
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13092	35.008	NaN	3860.2	30	0	373.4	0.106	+			19407	KAPEPLSSL	9	59	471.2685785103751	940.5226040875502	2	471.26873779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KAPEPLSSL_	ENSG00000088038|ENST00000221232|CNOT3	60.11826168202944	0.21262886028301267	2				NaN	NaN	0	NaN	9195	3895	13087
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13093	35.01	NaN	5062.1	30	0	1082.9	0.106	+			15933	HAEATIVVM	9	65	485.7560041708055	969.497455408411	2	485.7546691894531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HAEATIVVM_	ENSG00000132698|ENST00000361084|RAB25;ENST00000487325.5_1_1:156038076-156039544:+|nuORF	38.80614096846853	0.43426287593479557	2				NaN	NaN	0	NaN	9196	3895	13087
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13094	35.012	NaN	6058.2	30	0	343.83	0.036	+			6675	AYVHMVTHF	9	70	552.7682709412602	1103.5219889493203	2	552.7689208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AYVHMVTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	76.84663266511073	0.11118375776443899	2				NaN	NaN	0	NaN	9197	3895	13087
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13106	35.038	NaN	36555	30	0	4325.2	0.214	+			5711	AVFGVIGSQK	10	85	503.2900114965933	1004.5654700599866	2	503.2898254394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVFGVIGSQK_	ENSG00000065183|ENST00000349139|WDR3;WDR3|p.A919Cfs*2|1|0.38|ENSG00000065183|chr1:117959363-117959364|-/T|frameshift_variant;WDR3|p.K204Sfs*12|1|0.29|ENSG00000065183|chr1:117939505-117939505|A/-|frameshift_variant;WDR3|p.T410Ifs*46|1|0.05|ENSG00000065183|chr1:117943526-117943527|-/TAAATGTT|frameshift_variant	68.84614121027924	0.2867470276772903	2				NaN	NaN	0	NaN	9206	3898	13105
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13107	35.041	NaN	23433	30	0	3183.1	0.106	+			17835	IFIKDSNSL	9	85	518.7877381555734	1035.5609233779467	2	518.7877807617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IFIKDSNSL_	ENSG00000099995|ENST00000215793|SF3A1;nc|ENSG00000099995|Q15459-2|SF3A1	114.8945686534367	0.024290463251177924	2				NaN	NaN	0	NaN	9207	3898	13105
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13108	35.043	NaN	23320	30	0	2977.2	0.106	+			7194	DAHPTLVTY	9	90	508.756035752552	1015.497518571904	2	508.7557678222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DAHPTLVTY_	ENSG00000165819|ENST00000298717|METTL3;ENST00000396522.6_1_14:21967741-21972178:-|nuORF;ENST00000536201.5_1_14:21969853-21979446:-|nuORF	58.78195531508484	0.22376836668196862	2				NaN	NaN	0	NaN	9208	3898	13105
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13109	35.045	NaN	7498	30	0	822.17	0.106	+			39533	STFSEIFKK	9	77	543.7951494012561	1085.5757458693122	2	543.7952880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STFSEIFKK_	ENSG00000163931|ENST00000462138|TKT;ENST00000460343.5_1_3:53261754-53265639:-|nuORF;ENST00000461139.5_1_3:53259774-53265639:-|nuORF;ENST00000469678.1_1_3:53259917-53265542:-|nuORF;nc|ENSG00000163931|P29401-2|TKT	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	9209	3898	13105
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13110	35.047	NaN	9318.3	30	0	793.14	0.106				-1	 	0	70	534.7721779542393	1067.5298029752785	2	534.7719116210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9210	3898	13105
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13111	35.049	NaN	2445.8	30	0	159.41	0.106				-1	 	0	67	411.22268067008946	410.21540420348947	1	411.2223815917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9211	3898	13105
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13112	35.051	NaN	10692	30	0	874.94	0.036				-1	ASRGLSLFPE	10	78	559.7959998485733	1117.5774467639465	2	559.7958374023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))ASRGLSLFPE_	ENSG00000164054|ENST00000296444|SHISA5;nc|ENSG00000164054|Q8N114-2|SHISA5;nc|ENSG00000164054|Q8N114-5|SHISA5	44.377184641726394	0.5088115166961078	2				NaN	NaN	0	NaN	9212	3898	13105
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13126	35.08	NaN	11326	30	0	3460.9	0.214			+	7628	DKILDYTV	8	71	483.7604454696944	965.5063380061888	2	483.760498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DKILDYTV_	REV__ENSG00000175567|ENST00000663595|UCP2	84.9155231211612	0.2928622555056503	2				NaN	NaN	0	NaN	9223	3901	13125
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13127	35.084	NaN	3755.5	30	0	357.73	0.106				-1	TECVKQICL	9	69	547.2725562877469	1092.5305596422936	2	547.2726440429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_TEC(Carbamidomethyl (C))VKQICL_	ENSG00000169564|ENST00000303577|PCBP1	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	9224	3901	13125
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13128	35.086	NaN	5830.1	30	0	423.72	0.106			+	20846	KIKIDSTVF	9	72	525.8135786798019	1049.6126044264038	2	525.8137817382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KIKIDSTVF_	REV__CFAP54|p.Q2612Rfs*5|1|0.32|ENSG00000188596|chr12:96753887-96753887|T/-|frameshift_variant;REV__ENSG00000188596|ENST00000524981|CFAP54;REV__nc|ENSG00000188596|Q96N23-2|CFAP54	54.776311868738084	0.25715957988447635	2				NaN	NaN	0	NaN	9225	3901	13125
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13129	35.088	NaN	4005.7	30	0	664.78	0.106			+	-1	ELQENFNCL	9	77	583.7627620760658	1165.5109712189314	2	583.7636108398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_ELQENFNC(Carbamidomethyl (C))L_	REV__ENSG00000085063|ENST00000642928|CD59;REV__nc|ENSG00000284969|P13987-2|CD59	60.97194046774394	0.20551255781574032	2				NaN	NaN	0	NaN	9226	3901	13125
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13130	35.09	NaN	4978	30	0	646.74	0.106	+			4588	ATLGDLKLVEK	11	70	593.8559977822791	1185.6974426313582	2	593.85595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATLGDLKLVEK_	ENSG00000129083|ENST00000439561|COPB1	82.49433358170734	0.13157841501534762	2				NaN	NaN	0	NaN	9227	3901	13125
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13131	35.091	NaN	4331	30	0	766.57	0.034	+			37688	SLSGNQLGAL	10	62	480.26125526879787	NaN	0	480.27484130859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLSGNQLGAL_	ENSG00000180979|ENST00000397130|LRRC57;ENST00000569830.1_1_15:42836283-42839734:-|nuORF	74.25504064058377	0.12773286341944762	2				NaN	NaN	0	NaN	9228	3901	13125
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13132	35.092	NaN	6463.7	30	0	681.35	0.142	+			20029	KEITALAPSTM	11	73	581.3131605314329	1160.6117681296657	2	581.3135986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KEITALAPSTM_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000184009|ENST00000573283|ACTG1;ENST00000415776.1_1_Y:19868883-19869072:-|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000493945.5_1_7:5567381-5567853:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2	56.632244143249146	0.3535169766007185	2				NaN	NaN	0	NaN	9229	3901	13125
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13143	35.12	NaN	5854.2	30	0	1242.7	0.214	+			8437	EAREKDVL	8	63	480.26125526879787	NaN	0	480.26116943359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EAREKDVL_	ENSG00000226321|ENST00000690015|CROCC2;REV__ENSG00000175467|ENST00000312397|SART1;REV__ENST00000529532.5_1_11:65732585-65733974:+|nuORF	42.396135135203025	1.7418937515398478	2				NaN	NaN	0	NaN	9237	3904	13142
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13144	35.123	NaN	5141.5	30	0	871.34	0.106	+			39843	STLLNPIPK	9	69	491.80013880862657	NaN	0	491.8001708984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STLLNPIPK_	ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3;SCYL3|p.N511Ifs*68|1|0.35|ENSG00000000457|chr1:169854907-169854907|T/-|frameshift_variant	62.107414245175825	0.1403307765918332	2				NaN	NaN	0	NaN	9238	3904	13142
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13145	35.125	NaN	6157.2	30	0	2391.9	0.106				-1	FSQFCRLF	8	59	368.8481767268375	1103.5227007807125	3	368.8479309082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_FSQFC(Carbamidomethyl (C))RLF_	ENSG00000115112|ENST00000263707|TFCP2L1;TFCP2L1|p.Q427Sfs*18|1|0.32|ENSG00000115112|chr2:121231888-121231888|G/-|frameshift_variant	38.80614096846853	0.6637206697844082	2				NaN	NaN	0	NaN	9239	3904	13142
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13146	35.127	NaN	7846.3	30	0	2982.5	0.106	+			45547	TYLEKAIKI	9	67	360.2215745385131	1077.6428942157393	3	360.22174072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TYLEKAIKI_	ENSG00000187555|ENST00000344836|USP7;ENST00000565455.5_1_16:8987857-9023250:-|nuORF;nc|ENSG00000187555|Q93009-3|USP7;USP7|p.R1090H|1|0.23|ENSG00000187555|chr16:8894038-8894038|C/T|missense_variant	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	9240	3904	13142
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13147	35.129	NaN	9289.4	30	0	1968.9	0.106	+			50781	YEMEVSQRL	9	79	577.7792188384085	1153.543884743617	2	577.7789306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YEMEVSQRL_	ENSG00000102910|ENST00000285737|LONP2;LONP2|p.D678Efs*7|1|0.07|ENSG00000102910|chr16:48347601-48347602|-/GT|frameshift_variant;nc|ENSG00000102910|Q86WA8-2|LONP2	63.53385203322761	0.18415635464017938	2				NaN	NaN	0	NaN	9241	3904	13142
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13148	35.13	NaN	7875.8	30	0	1048.6	0.106	+			28455	NFILKESTS	9	73	519.7761527904278	1037.5377526476555	2	519.7910766601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NFILKESTS_	sp|P16782|RIR1_HCMVARibonucleoside-diphosphatereductaselargesubunit-likeproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=RIR1PE=3SV=1;sp|Q6SW87|RIR1_HCMVMRibonucleoside-diphosphatereductaselargesubunit-likeproteinOS=Humancytomegalovirus(strainMerlin)OX=295027GN=RIR1PE=3SV=1	60.11826168202944	0.21262886028301267	2				NaN	NaN	0	NaN	9242	3904	13142
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13149	35.132	NaN	3231.7	30	0	389.78	0.033	+			13224	GIGVLMGVL	9	60	437.75703012699	873.49950732078	2	437.7567443847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_GIGVLM(Oxidation (M))GVL_	tr|U7T3C5|U7T3C5_FUSNUDUF819domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00216PE=4SV=1	60.403631409065575	0.21025000616765316	2				NaN	NaN	0	NaN	9243	3904	13142
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13161	35.158	NaN	34744	30	0	3998.7	0.214	+			41396	SVMPAGVDKI	10	94	508.7765621336594	1015.5385713341188	2	508.7765197753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVMPAGVDKI_	ENSG00000155561|ENST00000285968|NUP205;ENST00000477620.5_1_7:135320372-135330929:+|nuORF	67.49366992349736	0.29779660154124327	2				NaN	NaN	0	NaN	9252	3907	13160
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13162	35.161	NaN	19725	30	0	1322.2	0.106	+			45548	TYLEKAIKI	9	87	539.8293579623482	1077.6441629914964	2	539.8297729492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TYLEKAIKI_	ENSG00000187555|ENST00000344836|USP7;ENST00000565455.5_1_16:8987857-9023250:-|nuORF;nc|ENSG00000187555|Q93009-3|USP7;USP7|p.R1090H|1|0.23|ENSG00000187555|chr16:8894038-8894038|C/T|missense_variant	146.78539889680295	0.007618400906539062	2				NaN	NaN	0	NaN	9253	3907	13160
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13163	35.163	NaN	18559	30	0	3024.1	0.106	+			24318	LFHPSNVEM	9	76	537.2579117017633	1072.5012704703265	2	537.2586669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LFHPSNVEM_	ENSG00000151694|ENST00000310823|ADAM17	90.36981228632155	0.0638227155548745	2				NaN	NaN	0	NaN	9254	3907	13160
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13164	35.165	NaN	7883	30	0	2012	0.106				-1	ASTKKVVMK	9	67	336.534227507259	NaN	0	336.5343017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_ASTKKVVM(Oxidation (M))K_	CFAP47|p.F1567Vfs*4|1|0.31|ENSG00000165164|chrX:36098829-36098830|-/G|frameshift_variant;CFAP47|p.H2345Afs*15|1|0.09|ENSG00000165164|chrX:36236809-36236810|-/A|frameshift_variant;CFAP47|p.K734Nfs*6|1|0.13|ENSG00000165164|chrX:35971909-35971909|A/-|frameshift_variant;CFAP47|p.P2326Tfs*34|1|0.26|ENSG00000165164|chrX:36236751-36236752|-/A|frameshift_variant;ENSG00000165164|ENST00000378653|CFAP47;nc|ENSG00000165164|Q6ZTR5-1|CFAP47;nc|ENSG00000165164|Q6ZTR5-2|CFAP47;nc|ENSG00000165164|Q6ZTR5-6|CFAP47	30.317721548370564	0.32449924987115025	2				NaN	NaN	0	NaN	9255	3907	13160
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13165	35.167	NaN	15598	30	0	1975.5	0.106	+			40522	STYYGSFVTR	10	79	590.7854997500542	1179.5564465669083	2	590.7858276367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STYYGSFVTR_	EIF3H|p.S183Pfs*5|1|0.05|ENSG00000147677|chr8:116657225-116657225|A/-|frameshift_variant;ENSG00000147677|ENST00000521861|EIF3H;ENST00000517974.1_1_8:117671049-117768052:-|nuORF;ENST00000518034.5_1_8:117671049-117768048:-|nuORF	139.38205640894643	0.010918844784185366	2				NaN	NaN	0	NaN	9256	3907	13160
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13166	35.169	NaN	9861.1	30	0	3069.2	0.106	+			3066	ASFPKVFIK	9	71	346.21101383363043	1035.6112121010913	3	346.2112121582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASFPKVFIK_	ENSG00000112234|ENST00000369244|FBXL4	47.657333605630114	0.33044192980041115	2				NaN	NaN	0	NaN	9257	3907	13160
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13167	35.171	NaN	26718	30	0	3096.2	0.036	+			24108	LEKLNQQLL	9	87	549.8295312426542	1097.6445095521083	2	549.8302001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LEKLNQQLL_	ENSG00000173230|ENST00000614479|GOLGB1;nc|ENSG00000173230|Q14789-2|GOLGB1;nc|ENSG00000173230|Q14789-3|GOLGB1;nc|ENSG00000173230|Q14789-4|GOLGB1;nc|ENSG00000173230|Q14789|GOLGB1	90.36981228632155	0.0638227155548745	2				NaN	NaN	0	NaN	9258	3907	13160
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13179	35.197	NaN	47418	30	0	4626.1	0.214	+			12755	GELGNGNIKL	10	80	507.7823263952785	1013.550099857357	2	507.7824401855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GELGNGNIKL_	ENSG00000132646|ENST00000379143|PCNA	117.81106730687013	0.030421278947300796	2				NaN	NaN	0	NaN	9267	3910	13178
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13180	35.2	NaN	5001.7	30	0	873.03	0.106	+			24166	LEMMMKIL	8	68	512.7668174367476	1023.5190819402952	2	512.7692260742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LEMM(Oxidation (M))MKIL_	ENST00000379607.9_1_X:20146365-20150302:-|nuORF	55.50420428727701	0.5462892107279674	2				NaN	NaN	0	NaN	9268	3910	13178
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13181	35.202	NaN	4632.4	30	0	274.34	0.106			+	17917	IGISNLVEK	9	69	486.7898022962963	971.5650516593926	2	486.78924560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IGISNLVEK_	REV__ENSG00000166046|ENST00000299045|TCP11L2	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	9269	3910	13178
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13182	35.204	NaN	5647.6	30	0	425.11	0.106				-1	CLVFMGVGAM	10	75	522.2402663803326	1042.4659798274652	2	522.2396850585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_CLVFMGVGAM(Oxidation (M))_	tr|U7T3F0|U7T3F0_FUSNUOxaloacetatedecarboxylase,betasubunitOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00407PE=4SV=1	65.89745868150666	0.31220354485832413	2				NaN	NaN	0	NaN	9270	3910	13178
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13183	35.206	NaN	3115.3	30	0	361.81	0.106	+			46340	VEKLTKLVL	9	65	348.23370883721606	1041.6792971118482	3	348.23370361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VEKLTKLVL_	ENSG00000112685|ENST00000230449|EXOC2	26.69291269510374	0.5537881896960711	2				NaN	NaN	0	NaN	9271	3910	13178
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13184	35.208	NaN	3842.2	30	0	566.16	0.106			+	45410	TVVGVLLQT	9	55	465.28726503562245	928.5599771380449	2	465.2869567871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TVVGVLLQT_	REV__ENST00000511220.1_1_5:92603510-92603882:+|nuORF	47.657333605630114	0.33044192980041115	2				NaN	NaN	0	NaN	9272	3910	13178
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13185	35.209	NaN	3776.2	30	0	358.68	0.037			+	-1	LYKQMLAEY	9	71	587.7941611380495	1173.573769342899	2	587.7943725585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_LYKQM(Oxidation (M))LAEY_	REV__RASGRF1|p.H136Y|1|0.34|ENSG00000058335|chr15:79058459-79058459|G/A|missense_variant	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	9273	3910	13178
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13196	35.233	NaN	108720	30	0	6444.4	0.149	+			26903	LYADVGGKQF	10	92	549.2850477073209	1096.5555424814418	2	549.2850341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LYADVGGKQF_	ENSG00000180879|ENST00000370086|SSR4;ENST00000460616.5_1_X:153061851-153063636:+|nuORF;ENST00000485612.5_1_X:153061851-153063885:+|nuORF	114.8945686534367	0.03454040281423369	2				NaN	NaN	0	NaN	9281	3913	13195
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13197	35.236	NaN	14526	30	0	1771.8	0.106	+			17441	IAVHPEKGL	9	76	482.2845389273892	962.5545249215784	2	482.2843933105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IAVHPEKGL_	ENSG00000168702|ENST00000389484|LRP1B;LRP1B|p.C2682Vfs*15|1|0.3|ENSG00000168702|chr2:140516994-140516994|A/-|frameshift_variant;LRP1B|p.C3762Lfs*2|1|0.32|ENSG00000168702|chr2:140358089-140358090|-/A|frameshift_variant;LRP1B|p.G4130Mfs*20|1|0.06|ENSG00000168702|chr2:140324019-140324020|-/AT|frameshift_variant;LRP1B|p.H4368Tfs*4|1|0.47|ENSG00000168702|chr2:140274465-140274465|C/-|frameshift_variant;LRP1B|p.I3028Nfs*2|1|0.39|ENSG00000168702|chr2:140492645-140492646|-/T|frameshift_variant;LRP1B|p.K2543Nfs*42|1|0.08|ENSG00000168702|chr2:140536594-140536594|T/-|frameshift_variant;LRP1B|p.N3100Kfs*6|1|0.21|ENSG00000168702|chr2:140485468-140485469|-/T|frameshift_variant;LRP1B|p.N3434Tfs*84|1|0.47|ENSG00000168702|chr2:140442617-140442617|T/-|frameshift_variant;LRP1B|p.N4135Mfs*14|1|0.13|ENSG00000168702|chr2:140324003-140324003|T/-|frameshift_variant;LRP1B|p.R3957Kfs*11|2|0.15|ENSG00000168702|chr2:140350819-140350820|-/T|frameshift_variant;LRP1B|p.T2640Pfs*5|1|0.12|ENSG00000168702|chr2:140525952-140525952|T/-|frameshift_variant;LRP1B|p.Y3120*|1|0.16|ENSG00000168702|chr2:140485402-140485408|AGTAGGG/-|frameshift_variant	71.29570347882199	0.13518600952103718	2				NaN	NaN	0	NaN	9282	3913	13195
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13198	35.237	NaN	16932	30	0	2472	0.106	+			11172	FGQLGREL	8	75	460.25348115278206	918.4924093723641	2	460.25311279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FGQLGREL_	ENSG00000277150|ENST00000622749|F8A3	93.19546047674547	0.2677966331495483	2				NaN	NaN	0	NaN	9283	3913	13195
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13199	35.239	NaN	16026	30	0	1728.7	0.106	+			8481	EASKYIMQY	9	80	566.7709083008613	1131.5272636685224	2	566.7710571289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EASKYIMQY_	ENSG00000176658|ENST00000318217|MYO1D	171.53180478179638	0.0025054460641941692	2				NaN	NaN	0	NaN	9284	3913	13195
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13200	35.241	NaN	7161.1	30	0	1793.3	0.106				-1	KMCRKMVF	8	66	558.2786153467022	1114.5426777602042	2	558.278564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C),Oxidation (M)	_KM(Oxidation (M))C(Carbamidomethyl (C))RKMVF_	LGMN|p.Y179C|1|0.08|ENSG00000100600|chr14:92713830-92713830|T/C|missense_variant	54.76467175910256	0.5536104764165384	2				NaN	NaN	0	NaN	9285	3913	13195
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13201	35.243	NaN	8533.6	30	0	856.67	0.106	+			15287	GTVAGAAVLLK	11	74	500.3134523590019	998.6123517848038	2	500.31298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTVAGAAVLLK_	ENSG00000160439|ENST00000415061|RDH13;ENST00000589305.5_1_19:55562362-55574430:-|nuORF	155.5846463517096	6.121264099560852E-05	2				NaN	NaN	0	NaN	9286	3913	13195
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13202	35.245	NaN	4469.8	30	0	648.9	0.037	+			50010	WAWLMIVVL	9	70	573.8221595144682	1145.6297660957364	2	573.8224487304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_WAWLM(Oxidation (M))IVVL_	ENST00000302640.12_1_3:4558245-4669470:+|nuORF	60.403631409065575	0.21025000616765316	2				NaN	NaN	0	NaN	9287	3913	13195
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13203	35.245	NaN	3101.4	30	0	243.01	0.142	+			33807	RQPSWDPSPV	10	69	584.7909740427083	1167.5673951522165	2	584.7911987304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_RQPSWDPSPV_	ENSG00000115310|ENST00000337526|RTN4;nc|ENSG00000115310|Q9NQC3-2|RTN4;nc|ENSG00000115310|Q9NQC3-5|RTN4;RTN4|p.K423Nfs*32|1|0.38|ENSG00000115310|chr2:55026830-55026830|T/-|frameshift_variant;RTN4|p.K969Efs*10|1|0.04|ENSG00000115310|chr2:55025195-55025196|-/GGGAACATTCC|frameshift_variant;RTN4|p.L340Pfs*3|1|0.04|ENSG00000115310|chr2:55027080-55027081|-/G|frameshift_variant;RTN4|p.R854Sfs*2|1|0.05|ENSG00000115310|chr2:55025537-55025538|-/AA|frameshift_variant;RTN4|p.V670Sfs*9|1|0.38|ENSG00000115310|chr2:55026091-55026092|-/T|frameshift_variant;RTN4|p.V670Yfs*4|4|0.29|ENSG00000115310|chr2:55026092-55026092|T/-|frameshift_variant	49.536043120802724	0.461275219792494	2				NaN	NaN	0	NaN	9288	3913	13195
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13214	35.273	NaN	25692	30	0	2500.4	0.214	+			6569	AYLEAHETF	9	79	540.7537860441194	1079.4930191550386	2	540.7539672851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AYLEAHETF_	ENSG00000111581|ENST00000229179|NUP107;nc|ENSG00000111581|P57740-2|NUP107;nc|ENSG00000111581|P57740-3|NUP107	133.8126618989323	0.013382794002272486	2				NaN	NaN	0	NaN	9296	3916	13213
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13215	35.276	NaN	13938	30	0	1766.3	0.106			+	36585	SFVVATKGSE	10	84	512.7668174367476	1023.5190819402952	2	513.2681274414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SFVVATKGSE_	REV__ENSG00000139287|ENST00000333850|TPH2;REV__nc|ENSG00000139287|Q8IWU9-2|TPH2;REV__TPH2|p.Y450Tfs*8|1|0.07|ENSG00000139287|chr12:72031567-72031567|C/-|frameshift_variant	46.45678178249821	0.4896490706773647	2				NaN	NaN	0	NaN	9297	3916	13213
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13216	35.278	NaN	6302.6	30	0	1214.9	0.106			+	43540	THAEKLNGVM	10	70	558.2786153467022	1114.5426777602042	2	558.2786254882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_THAEKLNGVM(Oxidation (M))_	REV__ENST00000300976.8_1_19:18782101-18782323:+|nuORF	54.776311868738084	0.41334902933431344	2				NaN	NaN	0	NaN	9298	3916	13213
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13217	35.28	NaN	8330.2	30	0	1179.8	0.106	+			12720	GEKTIIITC	9	73	489.2703575302593	976.5261621273186	2	489.2704162597656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEKTIIITC_	ENSG00000174231|ENST00000304992|PRPF8	61.691277971877994	0.19951612995419254	2				NaN	NaN	0	NaN	9299	3916	13213
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13218	35.282	NaN	5366	30	0	1052.6	0.106	+			20034	KEITQEMQTL	10	75	610.814077530288	1219.613602127376	2	610.8136596679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEITQEMQTL_	ENSG00000104133|ENST00000261866|SPG11;nc|ENSG00000104133|Q96JI7-2|SPG11;nc|ENSG00000104133|Q96JI7-3|SPG11	82.83050618871818	0.17249597090446123	2				NaN	NaN	0	NaN	9300	3916	13213
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13219	35.284	NaN	2736.9	30	0	285.83	0.106	+			18527	ISLEHIFY	8	68	511.2691384964463	1020.5237240596927	2	511.26947021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ISLEHIFY_	PRSS16|p.R132I|1|0.38|ENSG00000112812|chr6:27249157-27249157|G/T|missense_variant	42.47446043378293	0.6409579893742323	2				NaN	NaN	0	NaN	9301	3916	13213
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13220	35.286	NaN	4421	30	0	482.31	0.037	+			43720	TKSNALDIIF	10	72	561.311606531176	NaN	0	561.3112182617188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TKSNALDIIF_	C1S|p.Q658Sfs*11|1|0.25|ENSG00000182326|chr12:7070553-7070553|C/-|frameshift_variant;C1S|p.W283Lfs*14|1|0.37|ENSG00000182326|chr12:7065934-7065935|-/A|frameshift_variant;ENSG00000182326|ENST00000360817|C1S	39.252832667884924	0.37128895876774715	2				NaN	NaN	0	NaN	9302	3916	13213
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13232	35.311	NaN	11297	30	0	2529.9	0.214	+			4638	ATLPPITVTSK	11	77	564.3372355618601	1126.65991819052	2	564.337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATLPPITVTSK_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	51.52775601994872	0.4002081502334604	2				NaN	NaN	0	NaN	9311	3919	13231
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13233	35.315	NaN	3641.2	30	0	369.85	0.106			+	18026	IINKSAQPL	9	64	492.29701470326245	982.5794764733249	2	492.2948303222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IINKSAQPL_	REV__ENST00000480134.5_2_1:33478679-33478739:-|nuORF	39.252832667884924	0.4290233611298554	2				NaN	NaN	0	NaN	9312	3919	13231
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13234	35.317	NaN	3869.4	30	0	465.9	0.106			+	46626	VGAEKEKL	8	68	437.2557054681543	NaN	0	437.2557678222656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VGAEKEKL_	REV__ENSG00000112874|ENST00000230792|NUDT12;REV__nc|ENSG00000112874|Q9BQG2-2|NUDT12	85.35947970620816	1.7418937515398478	2				NaN	NaN	0	NaN	9313	3919	13231
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13235	35.318	NaN	6841.3	30	0	478.61	0.106	+			2931	ASCTVILKY	9	73	527.7839532641568	1053.5533535951135	2	527.7843627929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_ASC(Carbamidomethyl (C))TVILKY_	ENST00000463441.5_1_7:150020319-150023055:+|nuORF;ENST00000493307.1_1_7:150020428-150023055:+|nuORF	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	9314	3919	13231
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13236	35.32	NaN	4841.6	30	0	573.04	0.106			+	-1	NPDFNVRAEM	10	73	604.770315000821	1207.526077068442	2	604.7703247070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_NPDFNVRAEM(Oxidation (M))_	REV__tr|U7STJ5|U7STJ5_FUSNUTyrrecombinasedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01507PE=3SV=1	35.17822180527639	0.5925517082438457	2				NaN	NaN	0	NaN	9315	3919	13231
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13237	35.322	NaN	4911.6	30	0	403.47	0.106	+			46371	VEKYIEEQL	9	68	575.8031035393449	1149.5916541454897	2	575.8024291992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VEKYIEEQL_	ARL2BP|p.S71Y|1|0.28|ENSG00000102931|chr16:57249771-57249771|C/A|missense_variant;ENSG00000102931|ENST00000219204|ARL2BP;nc|ENSG00000102931|Q9Y2Y0-2|ARL2BP	125.71293069911285	0.017741295328254008	2				NaN	NaN	0	NaN	9316	3919	13231
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13238	35.324	NaN	2002.7	30	0	126.73	0.031				-1	 	0	61	348.77243726042923	695.5303215876585	2	348.77264404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9317	3919	13231
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13249	35.349	NaN	18542	30	0	3615.3	0.214	+			711	AEASMISKL	9	86	475.2548101727897	NaN	0	475.2549133300781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEASMISKL_	ENSG00000055130|ENST00000325222|CUL1	123.20810148215591	0.0016355521601317592	2				NaN	NaN	0	NaN	9325	3922	13248
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13250	35.352	NaN	7817.8	30	0	1775.6	0.106	+			19779	KEAIETIVAA	10	68	522.8004238039895	1043.5862946747789	2	522.8005981445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEAIETIVAA_	ENSG00000087460|ENST00000371085|GNAS;ENST00000313949.11_1_20:57415898-57485881:+|nuORF;ENST00000371075.7_3_20:57415898-57485881:+|nuORF;ENST00000476196.5_1_20:57478538-57485881:+|nuORF;ENST00000477931.5_1_20:57464155-57485881:+|nuORF;ENST00000480975.5_1_20:57464272-57485881:+|nuORF;ENST00000487981.5_1_20:57478601-57484479:+|nuORF;ENST00000494081.5_1_20:57478601-57480533:+|nuORF;ENST00000496934.5_1_20:57473969-57485881:+|nuORF;nc|ENSG00000087460|P63092-2|GNAS;nc|ENSG00000087460|P63092-3|GNAS;nc|ENSG00000087460|P63092-4|GNAS;nc|ENSG00000087460|Q5JWF2-2|GNAS;nc|ENSG00000087460|Q5JWF2|GNAS	58.2462437865262	0.38179041844353556	2				NaN	NaN	0	NaN	9326	3922	13248
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13251	35.354	NaN	6346.5	30	0	555.95	0.106	+			19408	KAPEPLSSL	9	64	471.2685785103751	940.5226040875502	2	471.26849365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KAPEPLSSL_	ENSG00000088038|ENST00000221232|CNOT3	56.43379154798735	0.2433427591689151	2				NaN	NaN	0	NaN	9327	3922	13248
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13252	35.356	NaN	4811.6	30	0	1685.7	0.106	+			50224	WNSSTLEQRAN	11	57	653.3143103645547	1304.6140677959092	2	653.31396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_WNSSTLEQRAN_	ENSG00000177483|ENST00000316997|RBM44;RBM44|p.I38Nfs*44|1|0.32|ENSG00000177483|chr2:237821162-237821163|-/A|frameshift_variant;RBM44|p.N125Mfs*4|1|0.07|ENSG00000177483|chr2:237823503-237823503|A/-|frameshift_variant;RBM44|p.Y233Kfs*26|1|0.06|ENSG00000177483|chr2:237827498-237827499|-/AAATTTGAAAATGAAGCTCAAAAAAATAA|frameshift_variant	20.83715455343099	0.7712264395190968	2				NaN	NaN	0	NaN	9328	3922	13248
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13253	35.358	NaN	6759.5	30	0	829.77	0.106			+	50919	YGNISVRCL	9	68	512.7668174367476	1023.5190819402952	2	512.763916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YGNISVRCL_	REV__ENSG00000011275|ENST00000389902|RNF216;REV__nc|ENSG00000011275|Q9NWF9-3|RNF216;REV__nc|ENSG00000011275|Q9NWF9|RNF216	41.42661286455405	0.403525789677298	2				NaN	NaN	0	NaN	9329	3922	13248
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13254	35.36	NaN	4482.3	30	0	380.02	0.106			+	44236	TRSLPVSLE	9	63	501.28500054779425	1000.5554481623885	2	501.28515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TRSLPVSLE_	REV__ENST00000371589.8_1_9:139981425-139981509:+|nuORF	44.377184641726394	0.36891676396732553	2				NaN	NaN	0	NaN	9330	3922	13248
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13255	35.362	NaN	2418.2	30	0	314.54	0.038			+	7414	DEKTQAQGAME	11	60	612.2651141367326	1222.515675340265	2	612.2646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_DEKTQAQGAM(Oxidation (M))E_	REV__ENSG00000171914|ENST00000636159|TLN2	46.45678178249821	0.46959456050452836	2				NaN	NaN	0	NaN	9331	3922	13248
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13266	35.387	NaN	21970	30	0	3506.2	0.214			+	20241	KELTLVKQ	8	78	479.8001613029945	957.5857696727891	2	479.7999572753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KELTLVKQ_	REV__ENST00000552049.5_1_12:52404317-52404936:+|nuORF	129.68262048586715	0.2207121622506348	2				NaN	NaN	0	NaN	9339	3925	13265
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13267	35.391	NaN	4932	30	0	576.6	0.106	+			33099	RELIQTSAL	9	73	515.7962656615714	1029.5779783899427	2	515.7982788085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RELIQTSAL_	ENSG00000097033|ENST00000370558|SH3GLB1;nc|ENSG00000097033|Q9Y371-2|SH3GLB1;nc|ENSG00000097033|Q9Y371-3|SH3GLB1	77.31757898189308	0.1091473830098891	2				NaN	NaN	0	NaN	9340	3925	13265
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13268	35.393	NaN	4633.5	30	0	725.35	0.106			+	15828	GWCAQVTSPG	10	66	503.2271523054671	1004.4397516777342	2	503.22735595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GWCAQVTSPG_	REV__ENST00000377658.8_1_1:6651717-6651999:-|nuORF	27.882242232435846	0.6521336255503853	2				NaN	NaN	0	NaN	9341	3925	13265
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13269	35.395	NaN	2555.8	30	0	857.74	0.106			+	16864	HPGGPLQLL	9	51	466.2717263860549	930.5288998389099	2	466.271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HPGGPLQLL_	REV__ENSG00000105429|ENST00000251268|MEGF8;REV__nc|ENSG00000105429|Q7Z7M0-2|MEGF8	33.51558372728122	0.4900267029546261	2				NaN	NaN	0	NaN	9342	3925	13265
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13270	35.397	NaN	5267.2	30	0	741.75	0.106			+	1737	AHNKFVELE	9	70	543.782638159041	1085.5507233848818	2	543.7825927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AHNKFVELE_	REV__ENSG00000075223|ENST00000265361|SEMA3C	37.15910966729921	0.4535818937225704	2				NaN	NaN	0	NaN	9343	3925	13265
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13271	35.398	NaN	4363.5	30	0	376.13	0.106			+	26875	LWLFTRLN	8	62	531.8086940375671	1061.602835141934	2	531.8085327148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LWLFTRLN_	REV__MVK|p.R40W|1|0.07|ENSG00000110921|chr12:109576037-109576037|C/T|missense_variant	50.0245360154114	0.5941082100236891	2				NaN	NaN	0	NaN	9344	3925	13265
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13272	35.4	NaN	3783.4	30	0	369.31	0.038	+			43799	TLLSNLEEAKK	11	72	623.3557457987054	1244.6969386642106	2	623.35546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TLLSNLEEAKK_	ENSG00000120885|ENST00000316403|CLU;ENST00000518050.1_1_8:27466361-27472184:-|nuORF;ENST00000522299.5_1_8:27457218-27472184:-|nuORF;nc|ENSG00000120885|P10909-2|CLU;nc|ENSG00000120885|P10909-4|CLU;nc|ENSG00000120885|P10909-5|CLU;nc|ENSG00000120885|P10909-6|CLU	46.45678178249821	0.46959456050452836	2				NaN	NaN	0	NaN	9345	3925	13265
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13282	35.422	NaN	8397	30	0	1565.5	0.214	+			1067	AEKVEIATL	9	77	487.28178060575755	972.5490082783151	2	487.28155517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEKVEIATL_	ENSG00000041357|ENST00000044462|PSMA4;nc|ENSG00000041357|P25789-2|PSMA4	104.01359247289065	0.03510646158778409	2				NaN	NaN	0	NaN	9352	3928	13281
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13283	35.426	NaN	2500.9	30	0	466.18	0.106	+			5281	ATVHPGLEL	9	58	468.7609115415895	NaN	0	468.76116943359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATVHPGLEL_	ENSG00000161542|ENST00000446526|PRPSAP1;ENST00000472686.1_1_17:74309820-74324990:-|nuORF;nc|ENSG00000161542|Q14558|PRPSAP1	42.396135135203025	0.2590952873412954	2				NaN	NaN	0	NaN	9353	3928	13281
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13284	35.428	NaN	3613	30	0	387.07	0.106	+			6676	AYVHMVTHF	9	67	552.7682709412602	1103.5219889493203	2	552.7691040039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AYVHMVTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	40.5726180659479	0.4135428067754104	2				NaN	NaN	0	NaN	9354	3928	13281
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13285	35.429	NaN	3930.7	30	0	1131.2	0.106				-1	CSVCEMIQQQ	10	65	414.50359562715136	1240.488957481654	3	414.837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_CSVC(Carbamidomethyl (C))EM(Oxidation (M))IQQQ_	ENSG00000196090|ENST00000373187|PTPRT;nc|ENSG00000196090|O14522-1|PTPRT	20.030474535948922	0.7146664069068879	2				NaN	NaN	0	NaN	9355	3928	13281
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13286	35.431	NaN	4428.6	30	0	378.65	0.106	+			27760	MRDSLSLGRR	10	69	595.8263827118307	NaN	0	595.8268432617188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MRDSLSLGRR_	ENST00000246151.8_1_1:24114444-24114498:+|nuORF	59.93077597824379	0.23484348948204886	2				NaN	NaN	0	NaN	9356	3928	13281
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13287	35.433	NaN	2228.2	30	0	191.25	0.032				-1	 	0	60	384.77214873517937	767.5297445371588	2	384.77215576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9357	3928	13281
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13288	35.434	NaN	2303.9	30	0	328.74	0.143			+	8950	EFAELPGPTKF	11	65	618.3182373046875	NaN	0	618.3182373046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EFAELPGPTKF_	REV__ENSG00000109101|ENST00000579795|FOXN1;REV__FOXN1|p.P416Qfs*134|1|0.33|ENSG00000109101|chr17:28534814-28534814|C/-|frameshift_variant;REV__FOXN1|p.P583Lfs*5|1|0.16|ENSG00000109101|chr17:28537232-28537232|C/-|frameshift_variant	41.42661286455405	0.376895999158515	2				NaN	NaN	0	NaN	9358	3928	13281
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13299	35.461	NaN	24114	30	0	6978	0.214	+			29155	NVIHNLATY	9	90	522.7774921995351	1043.5404314658701	2	522.777587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NVIHNLATY_	ENSG00000123353|ENST00000243045|ORMDL2	98.62937762414208	0.04060045538121712	2				NaN	NaN	0	NaN	9366	3931	13298
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13300	35.465	NaN	24826	30	0	2481.4	0.106	+			4535	ATLAAVLQR	9	86	471.7901324314256	941.5657119296512	2	471.7900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATLAAVLQR_	ENSG00000159399|ENST00000290573|HK2	131.03138772384656	0.014687601201650916	2				NaN	NaN	0	NaN	9367	3931	13298
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13301	35.467	NaN	10703	30	0	981.29	0.106	+			35941	SEGKCFSVL	9	82	513.7497822093252	1025.4850114854503	2	513.7499389648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SEGKC(Carbamidomethyl (C))FSVL_	ENSG00000079246|ENST00000392132|XRCC5;XRCC5|p.Q488Rfs*29|1|0.06|ENSG00000079246|chr2:216141305-216141305|C/-|frameshift_variant	104.0567914643314	0.03506238181059741	2				NaN	NaN	0	NaN	9368	3931	13298
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13302	35.469	NaN	8088.4	30	0	1221.3	0.106	+			34767	RYGSPINTF	9	75	527.7691364833878	1053.5237200335755	2	527.7696533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RYGSPINTF_	ENSG00000188112|ENST00000341865|C6orf132	54.722347961057174	0.257609425301511	2				NaN	NaN	0	NaN	9369	3931	13298
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13303	35.47	NaN	7080.4	30	0	696.44	0.106	+			50617	YEAELRTTL	9	77	548.2878988024676	1094.561244671735	2	548.2880249023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YEAELRTTL_	ENSG00000232629|ENST00000437316|HLA-DQB2;nc|ENSG00000232629|P05538-2|HLA-DQB2;nc|ENSG00000232629|P05538|HLA-DQB2	65.15724298150197	0.17062369902793603	2				NaN	NaN	0	NaN	9370	3931	13298
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13304	35.472	NaN	5663.8	30	0	2400.1	0.106				-1	YQEMPCDWL	9	66	621.2520949311854	1240.4896369291707	2	621.252197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_YQEMPC(Carbamidomethyl (C))DWL_	ENSG00000182050|ENST00000611864|MGAT4C;MGAT4C|p.N300Mfs*2|1|0.24|ENSG00000182050|chr12:85979827-85979827|T/-|frameshift_variant;nc|ENSG00000182050|Q9UBM8-2|MGAT4C	32.81241826257853	0.4965981579233955	2				NaN	NaN	0	NaN	9371	3931	13298
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13305	35.474	NaN	6375.9	30	0	1579.6	0.037			+	6522	AYDGNLHTIT	10	55	368.8481767268375	1103.5227007807125	3	368.8481140136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AYDGNLHTIT_	REV__CDH4|p.R666H|1|0.12|ENSG00000179242|chr20:61928415-61928415|G/A|missense_variant	27.047317107675042	0.6589519614906109	2				NaN	NaN	0	NaN	9372	3931	13298
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13317	35.499	NaN	12516	30	0	2872.2	0.214			+	43630	TIPHTSFI	8	62	458.2504941234443	914.4864353136886	2	458.2501525878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TIPHTSFI_	REV__ENST00000265069.12_1_5:32354674-32354827:-|nuORF	50.0245360154114	0.5941082100236891	2				NaN	NaN	0	NaN	9381	3934	13316
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13318	35.503	NaN	8347.6	30	0	1265.5	0.106			+	10259	ETLKGPQPL	9	69	491.782079045225	981.54960515725	2	491.78173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ETLKGPQPL_	REV__ENST00000556716.5_1_14:21485757-21486740:-|nuORF	56.72105179125745	0.24094814563026265	2				NaN	NaN	0	NaN	9382	3934	13316
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13319	35.505	NaN	8050.7	30	0	995.31	0.106	+			36115	SEKNLNMIL	9	73	531.2861513123279	1060.5577496914557	2	531.2866821289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEKNLNMIL_	ENST00000519416.5_2_8:38677120-38677207:+|nuORF	74.25504064058377	0.12238981753128622	2				NaN	NaN	0	NaN	9383	3934	13316
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13320	35.507	NaN	6884.3	30	0	636.36	0.106			+	6854	CKMLEIAAILS	11	75	596.3276976886164	1190.6408424440326	2	596.3271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_CKMLEIAAILS_	REV__ENSG00000145016|ENST00000296343|RUBCN;REV__nc|ENSG00000145016|Q92622-2|RUBCN;REV__nc|ENSG00000145016|Q92622-3|RUBCN	58.22992032128504	0.3392555181951113	2				NaN	NaN	0	NaN	9384	3934	13316
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13321	35.509	NaN	5395.9	30	0	666.91	0.106	+			41561	SVQETVLPIK	10	61	557.3293822429424	1112.6442115526847	2	557.330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVQETVLPIK_	ENSG00000169057|ENST00000453960|MECP2;MECP2|p.E432Afs*3|1|0.03|ENSG00000169057|chrX:154030534-154030535|CC/-|frameshift_variant;MECP2|p.K449Sfs*33|1|0.2|ENSG00000169057|chrX:154030482-154030482|T/-|frameshift_variant;nc|ENSG00000169057|P51608|MECP2	106.88024417677582	0.05726438866303799	2				NaN	NaN	0	NaN	9385	3934	13316
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13322	35.51	NaN	5288.9	30	0	594.3	0.106	+			8482	EASKYIMQY	9	67	566.7709083008613	1131.5272636685224	2	566.7721557617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EASKYIMQY_	ENSG00000176658|ENST00000318217|MYO1D	60.97194046774394	0.20551255781574032	2				NaN	NaN	0	NaN	9386	3934	13316
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13323	35.512	NaN	3384.2	30	0	750.05	0.037				-1	AYCGFLHPGV	10	51	374.17955405075884	1119.5168327524766	3	374.1795349121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_AYC(Carbamidomethyl (C))GFLHPGV_	PARG|p.R854H|1|0.49|ENSG00000227345|chr10:49832889-49832889|C/T|missense_variant	24.519189625965996	0.6795976720565101	2				NaN	NaN	0	NaN	9387	3934	13316
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13333	35.536	NaN	6239.8	30	0	1361.8	0.214				-1	ASMKKVKSL	9	60	336.534227507259	NaN	0	336.53424072265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ASM(Oxidation (M))KKVKSL_	ENST00000369426.9_1_1:119575536-119588262:-|nuORF	20.94693142431847	0.3660861156085067	2				NaN	NaN	0	NaN	9394	3937	13332
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13334	35.539	NaN	5678.9	30	0	672.97	0.106			+	10231	ETIDRIIL	8	74	486.789179165156	971.563805397112	2	486.78912353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ETIDRIIL_	REV__tr|U7SZP2|U7SZP2_FUSNUHistidinekinasedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00818PE=4SV=1	52.936696900407355	0.5717071646657654	2				NaN	NaN	0	NaN	9395	3937	13332
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13335	35.541	NaN	4769.2	30	0	489.89	0.106	+			36330	SESSIDRLM	9	67	519.2502684568427	NaN	0	519.2506713867188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SESSIDRLM_	ENSG00000181789|ENST00000314797|COPG1	56.43379154798735	0.16452882468284893	2				NaN	NaN	0	NaN	9396	3937	13332
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13336	35.543	NaN	5094.4	30	0	570.3	0.106	+			21076	KKLTQSKFV	9	75	539.8341439335564	1077.6537349339128	2	539.8343505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KKLTQSKFV_	ENSG00000115461|ENST00000233813|IGFBP5	36.446750945000026	0.4619375763483977	2				NaN	NaN	0	NaN	9397	3937	13332
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13337	35.545	NaN	4139.1	30	0	551.45	0.106			+	13647	GMQKGGFDPES	11	66	576.7532486494771	1151.491944365754	2	576.7532958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GMQKGGFDPES_	REV__ENSG00000108021|ENST00000695737|TASOR2;REV__nc|ENSG00000108021|Q5VWN6-2|TASOR2	27.047317107675042	0.7060868989289394	2				NaN	NaN	0	NaN	9398	3937	13332
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13338	35.547	NaN	4530.8	30	0	489.37	0.106	+			28301	NEEINLKEI	9	72	551.2931357946816	1100.571718656163	2	551.293701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NEEINLKEI_	tr|U7SG92|U7SG92_FUSNUExonucleaseSbcCOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02225PE=4SV=1	90.60085204095205	0.06317133949006545	2				NaN	NaN	0	NaN	9399	3937	13332
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13339	35.548	NaN	3991.2	30	0	359.87	0.036			+	-1	LCVGWPNDI	9	73	537.2579117017633	1072.5012704703265	2	537.25830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_LC(Carbamidomethyl (C))VGWPNDI_	REV__ENSG00000162542|ENST00000294543|TMCO4;REV__nc|ENSG00000162542|Q5TGY1-2|TMCO4;REV__TMCO4|p.F412Lfs*180|1|0.26|ENSG00000162542|chr1:19737399-19737400|AG/-|frameshift_variant	51.33545320467046	0.2872990594074956	2				NaN	NaN	0	NaN	9400	3937	13332
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13351	35.574	NaN	6083.5	30	0	795.62	0.214				-1	 	0	56	379.2095019076791	756.4044508821582	2	379.20941162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9409	3940	13350
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13352	35.577	NaN	4273.7	30	0	507.79	0.106	+			23601	LANPHELSL	9	69	497.2721389904409	992.5297250476818	2	497.2716369628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LANPHELSL_	ENSG00000197312|ENST00000480945|DDI2;ENST00000486680.1_1_1:15944165-15960061:+|nuORF;nc|ENSG00000197312|Q5TDH0-2|DDI2;nc|ENSG00000197312|Q5TDH0-3|DDI2	95.81516180277367	0.04847050768394289	2				NaN	NaN	0	NaN	9410	3940	13350
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13353	35.579	NaN	6495.3	30	0	1575	0.106			+	4353	ATGRLPVI	8	55	413.7609398145461	825.5073266958922	2	413.76068115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATGRLPVI_	REV__ENST00000267116.7_1_12:56632135-56632420:-|nuORF	38.80614096846853	0.6637206697844082	2				NaN	NaN	0	NaN	9411	3940	13350
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13354	35.581	NaN	3837.3	30	0	877.39	0.106	+			23297	KYNDFGNSF	9	68	546.243569503623	1090.472586074046	2	546.2439575195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KYNDFGNSF_	ENSG00000166526|ENST00000299667|ZNF3;ENST00000487620.1_1_7:99668768-99673049:-|nuORF	70.8162118820467	0.13725933411854815	2				NaN	NaN	0	NaN	9412	3940	13350
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13355	35.583	NaN	3832.6	30	0	440.72	0.106	+			11727	FSENERLI	8	64	504.2616175480344	1006.5086821628688	2	504.2616271972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FSENERLI_	ENST00000502732.5_1_1:179076600-179076849:-|nuORF	90.60085204095205	0.2756512185673585	2				NaN	NaN	0	NaN	9413	3940	13350
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13356	35.585	NaN	2791.3	30	0	364.45	0.106			+	41006	SVGSAWPLSL	10	69	508.7732678277802	1015.5319827223605	2	508.77294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVGSAWPLSL_	REV__ENST00000530235.1_1_11:66406260-66406308:+|nuORF	39.252832667884924	0.5560298534376815	2				NaN	NaN	0	NaN	9414	3940	13350
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13357	35.587	NaN	3739.4	30	0	1031.3	0.031				-1	 	0	65	362.7407153003648	723.4668776675296	2	362.7404479980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9415	3940	13350
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13365	35.606	NaN	8898.9	30	0	963.87	0.214	+			14381	GTAIIQLPSK	10	83	514.3109713219033	1026.6073897106064	2	514.3109130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTAIIQLPSK_	ENSG00000112651|ENST00000388752|MRPL2;ENST00000485654.1_1_6:43022014-43023405:-|nuORF;MRPL2|p.M292*|1|0.49|ENSG00000112651|chr6:43054319-43054319|G/-|frameshift_variant;OBSL1-MRPL2|1|fusion	90.14881205920913	0.1302219035121668	2				NaN	NaN	0	NaN	9420	3943	13364
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13366	35.61	NaN	8259.8	30	0	1151.1	0.106	+			16935	HPNGLQVMY	9	70	529.758625674869	1057.502698416538	2	529.7582397460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HPNGLQVMY_	ENSG00000135775|ENST00000366669|COG2;ENST00000494371.5_1_1:230807261-230814859:+|nuORF;nc|ENSG00000135775|Q14746-2|COG2	76.84663266511073	0.11118375776443899	2				NaN	NaN	0	NaN	9421	3943	13364
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13367	35.612	NaN	5444.9	30	0	579.8	0.106	+			1008	AEKLEALSV	9	70	480.27395354511333	958.5333541570267	2	480.2743225097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEKLEALSV_	ENSG00000099901|ENST00000430524|RANBP1;ENST00000435265.5_1_22:20114425-20114572:+|nuORF;ENST00000448394.2_1_22:20110177-20114572:+|nuORF;nc|ENSG00000099901|P43487-2|RANBP1;nc|ENSG00000099901|P43487|RANBP1	63.53385203322761	0.18415635464017938	2				NaN	NaN	0	NaN	9422	3943	13364
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13368	35.614	NaN	4161.8	30	0	568.97	0.106	+			42634	TAVGHALVL	9	62	440.76611204534186	879.5176711574837	2	440.7658386230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TAVGHALVL_	COL6A3|p.A2956Lfs*45|1|0.33|ENSG00000163359|chr2:237336234-237336234|C/-|frameshift_variant;COL6A3|p.A2957Lfs*44|1|0.33|ENSG00000163359|chr2:237336232-237336232|A/-|frameshift_variant;COL6A3|p.G3016Vfs*19|1|0.34|ENSG00000163359|chr2:237334810-237334810|G/-|frameshift_variant;ENSG00000163359|ENST00000295550|COL6A3;ENST00000491769.1_1_2:238233419-238250825:-|nuORF;nc|ENSG00000163359|P12111-2|COL6A3;nc|ENSG00000163359|P12111-4|COL6A3	79.9392285194092	0.09781135437301468	2				NaN	NaN	0	NaN	9423	3943	13364
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13369	35.616	NaN	2879.1	30	0	399.92	0.106	+			28663	NLQRVEVI	8	63	485.7871386849009	NaN	0	485.78704833984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NLQRVEVI_	ENST00000540401.5_1_12:28421609-28702103:+|nuORF	60.29395666154354	1.7418937515398478	2				NaN	NaN	0	NaN	9424	3943	13364
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13370	35.617	NaN	3163.5	30	0	341.89	0.106	+			11825	FSVNGKVL	8	50	432.2528392377282	862.4911255422564	2	432.2527160644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FSVNGKVL_	ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2;NOMO1|p.P1102Hfs*42|1|0.36|ENSG00000103512|chr16:14886838-14886838|C/-|frameshift_variant;NOMO1|p.P141Sfs*12|1|0.33|ENSG00000103512|chr16:14846592-14846593|-/AG|frameshift_variant	93.19546047674547	0.2677966331495483	2				NaN	NaN	0	NaN	9425	3943	13364
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13371	35.619	NaN	4281.5	30	0	350.69	0.035			+	-1	CNLLINKI	8	77	494.2861063332739	986.5576597333478	2	494.2857360839844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_C(Carbamidomethyl (C))NLLINKI_	REV__ENST00000592995.1_1_17:58539164-58539350:-|nuORF	65.80317337860623	0.44433089765398776	2				NaN	NaN	0	NaN	9426	3943	13364
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13382	35.644	NaN	11805	30	0	1327.7	0.214			+	36657	SGLYGVITAV	10	79	490.2764591571788	978.5383653811576	2	490.2763977050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SGLYGVITAV_	REV__RGS12|p.M230T|1|0.38|ENSG00000159788|chr4:3316859-3316859|T/C|missense_variant	71.87747018426188	0.26198133118427214	2				NaN	NaN	0	NaN	9434	3946	13381
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13383	35.648	NaN	14561	30	0	5938.1	0.106	+			30894	QEKLFIQKL	9	65	382.9008365250047	1145.680680175214	3	382.9007873535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QEKLFIQKL_	ENSG00000078304|ENST00000694906|PPP2R5C;ENST00000553730.5_1_14:102276279-102348623:+|nuORF;nc|ENSG00000078304|Q13362-2|PPP2R5C;nc|ENSG00000078304|Q13362-3|PPP2R5C;nc|ENSG00000078304|Q13362-4|PPP2R5C;nc|ENSG00000078304|Q13362-5|PPP2R5C;nc|ENSG00000078304|Q13362|PPP2R5C;PPP2R5C|p.H504Qfs*14|1|0.07|ENSG00000078304|chr14:101925207-101925208|-/A|frameshift_variant	82.7504851949679	0.08565546331141553	2				NaN	NaN	0	NaN	9435	3946	13381
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13384	35.65	NaN	5138.2	30	0	275.89	0.106	+			6900	CLRQLAQR	8	72	494.27898662511694	986.5434203170339	2	494.7745056152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_CLRQLAQR_	ENSG00000008869|ENST00000233099|HEATR5B;nc|ENSG00000008869|Q9P2D3-3|HEATR5B	50.0245360154114	0.5941082100236891	2				NaN	NaN	0	NaN	9436	3946	13381
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13385	35.652	NaN	5506.5	30	0	1390.8	0.106	+			920	AEIEIMKKL	9	64	358.8789412193701	1073.6149942583104	3	358.87908935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEIEIMKKL_	ENSG00000073792|ENST00000382199|IGF2BP2;ENST00000496495.1_1_3:185393074-185393625:-|nuORF;ENST00000550858.1_1_12:42681476-42682067:+|nuORF;nc|ENSG00000073792|Q9Y6M1-1|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-3|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-4|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-5|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-6|IGF2BP2	31.954861631926434	0.5046124803899898	2				NaN	NaN	0	NaN	9437	3946	13381
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13386	35.653	NaN	6117.8	30	0	792.23	0.106	+			1380	AEVKGVYQF	9	67	520.7743005757294	1039.5340482182587	2	520.7739868164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEVKGVYQF_	ENSG00000166557|ENST00000299705|TMED3;nc|ENSG00000166557|Q9Y3Q3-2|TMED3	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	9438	3946	13381
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13387	35.655	NaN	6276.1	30	0	759.99	0.106			+	34018	RSKSEYLLL	9	76	554.8215499634425	1107.628546993685	2	554.8219604492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RSKSEYLLL_	REV__ENSG00000117266|ENST00000429964|CDK18;REV__ENST00000504648.5_1_1:205492597-205500503:+|nuORF;REV__nc|ENSG00000117266|Q07002-3|CDK18	39.252832667884924	0.4290233611298554	2				NaN	NaN	0	NaN	9439	3946	13381
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13388	35.657	NaN	6661.4	30	0	734	0.035			+	25857	LSFDARQVL	9	69	524.793182416126	1047.571811899052	2	524.7931518554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSFDARQVL_	REV__ENST00000263174.8_1_1:100111748-100111862:+|nuORF	99.37495909608758	0.03983967222258828	2				NaN	NaN	0	NaN	9440	3946	13381
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13396	35.677	NaN	7387.8	30	0	2489	0.214	+			25055	LLKQLPDAI	9	67	505.8158454609893	1009.6171379887786	2	505.8156433105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LLKQLPDAI_	ENSG00000188306|ENST00000340806|LRRIQ4	40.77816245573522	0.41113185337114944	2				NaN	NaN	0	NaN	9445	3949	13395
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13397	35.68	NaN	6289.2	30	0	1327.1	0.106				-1	 	0	67	357.2143329312135	712.414112929227	2	357.21441650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9446	3949	13395
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13398	35.682	NaN	6467.6	30	0	1139.9	0.106				-1	 	0	65	564.3372355618601	1126.65991819052	2	564.337158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9447	3949	13395
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13399	35.684	NaN	3421.9	30	0	937.25	0.106			+	23177	KWLPRYRK	8	66	573.8478811284069	1145.6812093236138	2	573.8472290039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KWLPRYRK_	REV__DNAH10|p.D3416Mfs*54|1|0.28|ENSG00000197653|chr12:123914871-123914871|C/-|frameshift_variant;REV__DNAH10|p.E1360*|1|0.18|ENSG00000197653|chr12:123830579-123830580|-/T|frameshift_variant;REV__DNAH10|p.K1737Nfs*15|2|0.42|ENSG00000197653|chr12:123845799-123845799|A/-|frameshift_variant;REV__DNAH10|p.N2655Kfs*10|1|0.19|ENSG00000197653|chr12:123877852-123877853|-/A|frameshift_variant;REV__DNAH10|p.N3499Ifs*2|1|0.14|ENSG00000197653|chr12:123916578-123916578|A/-|frameshift_variant;REV__DNAH10|p.P1206Lfs*12|1|0.08|ENSG00000197653|chr12:123819219-123819219|C/-|frameshift_variant;REV__DNAH10|p.Q2965Kfs*11|1|0.57|ENSG00000197653|chr12:123894687-123894687|C/-|frameshift_variant;REV__ENSG00000197653|ENST00000673944|DNAH10;REV__ENST00000467219.5_1_12:124265674-124298205:+|nuORF;REV__nc|ENSG00000197653|Q8IVF4-2|DNAH10;REV__nc|ENSG00000197653|Q8IVF4|DNAH10	29.14955571784316	0.7342621283720113	2				NaN	NaN	0	NaN	9448	3949	13395
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13400	35.686	NaN	3592.9	30	0	525.74	0.106	+			19536	KAYQLHSRPV	10	70	599.8377816268977	1197.6610103205953	2	599.838134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KAYQLHSRPV_	ENSG00000163808|ENST00000326047|KIF15;ENST00000493134.1_1_3:44840780-44854740:+|nuORF;KIF15|p.K1251Nfs*11|1|0.08|ENSG00000163808|chr3:44848041-44848042|-/TTTCAAATTC|frameshift_variant;nc|ENSG00000163808|Q9NS87-2|KIF15;nc|ENSG00000163808|Q9NS87-4|KIF15	25.57405402267927	0.6709832231498071	2				NaN	NaN	0	NaN	9449	3949	13395
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13401	35.688	NaN	3538	30	0	298.35	0.106	+			39637	STIEFKNMLK	10	77	605.8296054913391	1209.644658049478	2	605.8285522460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STIEFKNMLK_	ENSG00000163125|ENST00000369068|RPRD2;ENST00000492220.1_1_1:150381497-150445807:+|nuORF;nc|ENSG00000163125|Q5VT52-2|RPRD2;nc|ENSG00000163125|Q5VT52-3|RPRD2;RPRD2|p.G1389Efs*24|1|0.39|ENSG00000163125|chr1:150473110-150473110|G/-|frameshift_variant;RPRD2|p.L1399Wfs*14|2|0.26|ENSG00000163125|chr1:150473136-150473136|C/-|frameshift_variant;RPRD2|p.P1275Lfs*138|1|0.15|ENSG00000163125|chr1:150472768-150472768|C/-|frameshift_variant;RPRD2|p.T1353Pfs*60|1|0.13|ENSG00000163125|chr1:150473001-150473001|C/-|frameshift_variant	50.033510581677724	0.4566913063131936	2				NaN	NaN	0	NaN	9450	3949	13395
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13402	35.69	NaN	3402.5	30	0	343.5	0.037	+			38244	SQMLAMNIEK	10	76	582.7894873683131	1163.564421803426	2	583.2889404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SQMLAMNIEK_	ENSG00000104408|ENST00000220849|EIF3E	50.79123845855914	0.44970922346023856	2				NaN	NaN	0	NaN	9451	3949	13395
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13414	35.716	NaN	5566.5	30	0	394.98	0.214			+	12767	GELLKLGAQA	10	60	500.29477456130735	998.5749961894147	2	500.2950744628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GELLKLGAQA_	REV__ENST00000441507.1_1_3:48539778-48540581:-|nuORF	49.536043120802724	0.461275219792494	2				NaN	NaN	0	NaN	9460	3952	13413
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13415	35.719	NaN	5241.6	30	0	550.15	0.106	+			28150	NALNEQRVEF	10	71	610.3072707856949	1218.5999886381896	2	610.3067016601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NALNEQRVEF_	ENSG00000137497|ENST00000393695|NUMA1;nc|ENSG00000137497|Q14980-2|NUMA1;nc|ENSG00000137497|Q14980-3|NUMA1;nc|ENSG00000137497|Q14980-4|NUMA1;NUMA1|p.K1766Rfs*2|1|0.39|ENSG00000137497|chr11:72007357-72007357|G/-|frameshift_variant;NUMA1|p.L1786Pfs*18|1|0.23|ENSG00000137497|chr11:72007295-72007296|-/G|frameshift_variant	81.52500206392136	0.18316182710238588	2				NaN	NaN	0	NaN	9461	3952	13413
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13416	35.721	NaN	6278.9	30	0	552.33	0.106	+			24094	LEKKFGIQL	9	76	538.3293646184712	1074.6441763037424	2	538.329345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LEKKFGIQL_	ENSG00000179222|ENST00000326587|MAGED1;ENST00000485420.5_1_X:51636757-51640983:+|nuORF;ENST00000494718.5_1_X:51640434-51640983:+|nuORF;MAGED1|p.P628Rfs*18|1|0.09|ENSG00000179222|chrX:51900215-51900215|C/-|frameshift_variant;nc|ENSG00000179222|Q9Y5V3-2|MAGED1	98.58198989935565	0.04066992115528678	2				NaN	NaN	0	NaN	9462	3952	13413
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13417	35.723	NaN	6159.3	30	0	1267.4	0.106	+			27374	MKETTFPWT	9	72	570.7731915098667	NaN	0	570.7730712890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MKETTFPWT_	tr|U7SZ03|U7SZ03_FUSNUEthanolamineutilizationproteinEutQOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00832PE=4SV=1	58.78195531508484	0.1545138866451181	2				NaN	NaN	0	NaN	9463	3952	13413
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13418	35.725	NaN	3791.6	30	0	458.59	0.106	+			23411	LAARAMRNNF	10	67	582.3061790906125	NaN	0	582.3059692382812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LAARAMRNNF_	ENSG00000143797|ENST00000305997|MBOAT2	27.047317107675042	0.41136583337917604	2				NaN	NaN	0	NaN	9464	3952	13413
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13419	35.727	NaN	4455.4	30	0	423.74	0.106			+	16668	HIKGCNKM	8	78	502.2458158415404	NaN	0	502.24603271484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),Oxidation (M)	_HIKGC(Carbamidomethyl (C))NKM(Oxidation (M))_	REV__ATP8B3|p.T1172Rfs*12|1|0.27|ENSG00000130270|chr19:1785178-1785178|G/-|frameshift_variant;REV__ENSG00000130270|ENST00000310127|ATP8B3;REV__ENST00000531925.5_1_19:1789538-1806275:-|nuORF;REV__ENST00000533107.3_1_19:1799652-1806029:-|nuORF;REV__nc|ENSG00000130270|O60423-1|ATP8B3;REV__nc|ENSG00000130270|O60423-3|ATP8B3	54.76467175910256	1.7418937515398478	2				NaN	NaN	0	NaN	9465	3952	13413
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13420	35.729	NaN	3757.1	30	0	290.63	0.037				-1	 	0	70	593.2868018591315	1184.559050785063	2	593.286865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9466	3952	13413
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13433	35.756	NaN	7461	30	0	836.16	0.214	+			19882	KEESIVSSL	9	70	496.26902209452874	990.5234912558575	2	496.26873779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEESIVSSL_	ENSG00000242247|ENST00000263245|ARFGAP3;nc|ENSG00000242247|Q9NP61-2|ARFGAP3	101.25262130126117	0.03792372629710479	2				NaN	NaN	0	NaN	9476	3955	13432
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13434	35.76	NaN	7940.1	30	0	1180.2	0.106			+	15011	GTNAQPQVTI	10	73	514.7718809574599	1027.5292089817196	2	514.7722778320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTNAQPQVTI_	REV__ENSG00000105778|ENST00000318709|AVL9;REV__nc|ENSG00000105778|Q8NBF6-2|AVL9	46.45678178249821	0.4896490706773647	2				NaN	NaN	0	NaN	9477	3955	13432
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13435	35.762	NaN	13484	30	0	1975.4	0.106	+			28448	NFEIVSKNK	9	78	539.7983888780883	1077.5822248229765	2	539.79833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NFEIVSKNK_	nc|ENSG00000173954|B1AK76|SNURFL	47.657333605630114	0.33044192980041115	2				NaN	NaN	0	NaN	9478	3955	13432
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13436	35.764	NaN	5235.4	30	0	692.27	0.106	+			46429	VERLTGVSI	9	68	487.28769424091115	972.5608355486223	2	487.28759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VERLTGVSI_	ENSG00000137312|ENST00000376389|FLOT1;ENST00000487376.5_1_6:30695895-30698542:-|nuORF;nc|ENSG00000137312|O75955-2|FLOT1	54.722347961057174	0.257609425301511	2				NaN	NaN	0	NaN	9479	3955	13432
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13437	35.766	NaN	6299.6	30	0	1012.9	0.106	+			50490	YALKQSSILNQ	11	75	632.8477128061669	1263.6808726791337	2	632.8485717773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YALKQSSILNQ_	ENSG00000198839|ENST00000361822|ZNF277	80.45461616416974	0.1485828924062742	2				NaN	NaN	0	NaN	9480	3955	13432
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13438	35.767	NaN	3845.2	30	0	552.42	0.106			+	47220	VMGILMRY	8	63	491.76322063184796	981.5118883304959	2	491.76336669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VMGILMRY_	REV__ENSG00000188573|ENST00000338333|FBLL1	37.028477286268924	0.6747514403204248	2				NaN	NaN	0	NaN	9481	3955	13432
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13439	35.769	NaN	5866	30	0	1786.7	0.036	+			33092	RELDATATVL	10	65	544.800935055318	1087.5873171774358	2	544.8013916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RELDATATVL_	CUX1|p.A591Qfs*9|1|0.06|ENSG00000257923|chr7:102197181-102197182|-/CAGT|frameshift_variant;CUX1|p.E933Sfs*59|1|0.14|ENSG00000257923|chr7:102202089-102202089|C/-|frameshift_variant;CUX1|p.I1081Sfs*39|2|0.46|ENSG00000257923|chr7:102227471-102227471|C/-|frameshift_variant;ENSG00000257923|ENST00000292535|CUX1;ENST00000497815.5_1_7:101459310-101755188:+|nuORF;ENST00000560541.5_1_7:101556607-101926379:+|nuORF;ENST00000607092.1_1_7:101459310-101559544:+|nuORF;nc|ENSG00000257923|P39880-2|CUX1;nc|ENSG00000257923|P39880-3|CUX1;nc|ENSG00000257923|P39880-4|CUX1;nc|ENSG00000257923|P39880-5|CUX1;nc|ENSG00000257923|P39880-6|CUX1;nc|ENSG00000257923|P39880-9|CUX1;nc|ENSG00000257923|Q13948-10|CUX1;nc|ENSG00000257923|Q13948-2|CUX1;nc|ENSG00000257923|Q13948|CUX1	48.601550744091256	0.46988609897316763	2				NaN	NaN	0	NaN	9482	3955	13432
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13451	35.795	NaN	23450	30	0	2348.7	0.214	+			28086	NAFEVAEKY	9	89	535.761313044897	1069.5080731565938	2	535.76171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAFEVAEKY_	ENSG00000130402|ENST00000252699|ACTN4;ENST00000588618.5_1_19:39138385-39212431:+|nuORF	169.6522961985778	0.0028262690464207238	2				NaN	NaN	0	NaN	9491	3958	13450
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13452	35.798	NaN	14745	30	0	2002.6	0.106	+			27797	MSDTTFKAL	9	84	507.252011024914	1012.489469116628	2	507.252197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MSDTTFKAL_	CAPZA1|p.R259H|1|0.31|ENSG00000116489|chr1:112670047-112670047|G/A|missense_variant;CAPZA2|p.R259C|1|0.25|ENSG00000198898|chr7:116917781-116917781|C/T|missense_variant;ENSG00000116489|ENST00000263168|CAPZA1;ENSG00000198898|ENST00000361183|CAPZA2;ENST00000426421.5_1_7:116544367-116557918:+|nuORF;ENST00000466066.1_1_1:113202257-113212751:+|nuORF;ENST00000565906.2_1_15:89532752-89533049:-|nuORF	154.1183686248401	0.005909203230691971	2				NaN	NaN	0	NaN	9492	3958	13450
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13453	35.8	NaN	12554	30	0	1341.9	0.106			+	13018	GEVKVKDAL	9	81	479.78166299766633	957.5487730621327	2	479.78155517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEVKVKDAL_	REV__ENST00000496613.5_1_7:140302290-140305578:-|nuORF	77.31757898189308	0.1091473830098891	2				NaN	NaN	0	NaN	9493	3958	13450
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13454	35.802	NaN	5148.6	30	0	443.52	0.106			+	-1	SFKDISTCM	9	80	552.7366020455495	1103.4586511578989	2	552.7379760742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_SFKDISTC(Carbamidomethyl (C))M(Oxidation (M))_	REV__ENSG00000179163|ENST00000374479|FUCA1	62.107414245175825	0.1960472003779324	2				NaN	NaN	0	NaN	9494	3958	13450
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13455	35.804	NaN	3471.2	30	0	1328.7	0.106	+			21078	KKMILMIGS	9	65	510.7998756224242	1019.5851983116485	2	510.8011169433594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KKMILMIGS_	ENST00000372771.4_1_1:40705712-40705763:+|nuORF	30.317721548370564	0.5199124245378496	2				NaN	NaN	0	NaN	9495	3958	13450
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13456	35.806	NaN	3555.5	30	0	511.14	0.106				-1	MGTNEAAIIEI	11	73	589.2909969442986	1176.5674409553972	2	589.2901000976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_M(Oxidation (M))GTNEAAIIEI_	ENSG00000104537|ENST00000419625|ANXA13;nc|ENSG00000104537|P27216-2|ANXA13	38.753607047826485	0.5749975102143227	2				NaN	NaN	0	NaN	9496	3958	13450
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13457	35.807	NaN	3200.6	30	0	297.44	0.039			+	7431	DEYEKKSLYN	10	66	644.8058017946939	1287.5970506561878	2	645.3077392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DEYEKKSLYN_	REV__tr|U7T2S5|U7T2S5_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00443PE=4SV=1	31.529811441608018	0.6223461015008678	2				NaN	NaN	0	NaN	9497	3958	13450
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13468	35.833	NaN	11242	30	0	1743.7	0.214	+			21650	KPVDPIVGY	9	78	494.27898662511694	986.5434203170339	2	494.2788391113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KPVDPIVGY_	COL12A1|p.F2273Lfs*20|1|0.26|ENSG00000111799|chr6:75124000-75124000|A/-|frameshift_variant;COL12A1|p.G2777Wfs*37|1|0.15|ENSG00000111799|chr6:75102684-75102685|-/G|frameshift_variant;COL12A1|p.G3027Wfs*19|1|0.1|ENSG00000111799|chr6:75087680-75087681|-/G|frameshift_variant;COL12A1|p.I210Nfs*4|1|0.18|ENSG00000111799|chr6:75189581-75189582|-/T|frameshift_variant;COL12A1|p.I57T|1|0.14|ENSG00000111799|chr6:75194851-75194851|A/G|missense_variant;COL12A1|p.L2085Hfs*4|1|0.22|ENSG00000111799|chr6:75128382-75128383|-/T|frameshift_variant;COL12A1|p.P2307Lfs*21|1|0.25|ENSG00000111799|chr6:75123356-75123356|G/-|frameshift_variant;COL12A1|p.R56I|1|0.31|ENSG00000111799|chr6:75194854-75194854|C/A|missense_variant;COL12A1|p.T1046Qfs*7|2|0.22|ENSG00000111799|chr6:75156372-75156372|G/-|frameshift_variant;ENSG00000111799|ENST00000322507|COL12A1;nc|ENSG00000111799|Q99715-4|COL12A1	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	9505	3961	13467
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13469	35.837	NaN	4228.3	30	0	393.13	0.106	+			46619	VFYDANDVGF	10	78	573.7569351719416	1145.499317410683	2	573.7576293945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VFYDANDVGF_	B3GALNT2|p.G383Efs*5|1|0.06|ENSG00000162885|chr1:235455562-235455562|C/-|frameshift_variant;ENSG00000162885|ENST00000366600|B3GALNT2;ENST00000494378.1_1_1:235643345-235647829:-|nuORF;nc|ENSG00000162885|Q8NCR0-2|B3GALNT2	36.446750945000026	0.5818864909973037	2				NaN	NaN	0	NaN	9506	3961	13467
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13470	35.839	NaN	5230.5	30	0	943.72	0.106	+			7038	CSRMYQKY	8	66	547.7400676710843	1093.4655824089684	2	547.7398071289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_CSRM(Oxidation (M))YQKY_	ENST00000570495.5_1_16:68596961-68597039:+|nuORF	58.78195531508484	0.5138399468736706	2				NaN	NaN	0	NaN	9507	3961	13467
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13471	35.84	NaN	5736.8	30	0	1404.3	0.106	+			32087	QSFDSALQSVK	11	67	605.3097026630963	1208.6048523929926	2	605.8106689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QSFDSALQSVK_	ENSG00000153201|ENST00000283195|RANBP2;RANBP2|p.A864Lfs*3|1|0.3|ENSG00000153201|chr2:108758533-108758533|G/-|frameshift_variant;RANBP2|p.C2737Vfs*35|1|0.18|ENSG00000153201|chr2:108772957-108772957|T/-|frameshift_variant;RANBP2|p.F3068Lfs*10|1|0.06|ENSG00000153201|chr2:108782692-108782692|T/-|frameshift_variant;RANBP2|p.H3114Sfs*18|1|0.33|ENSG00000153201|chr2:108782827-108782828|-/T|frameshift_variant;RANBP2|p.K1989Nfs*9|1|0.05|ENSG00000153201|chr2:108766505-108766506|-/TATCCTG|frameshift_variant;RANBP2|p.K2576Nfs*63|2|0.22|ENSG00000153201|chr2:108768262-108768262|A/-|frameshift_variant;RANBP2|p.S1486Rfs*51|1|0.05|ENSG00000153201|chr2:108764996-108764997|-/ATTTTGTATTC|frameshift_variant	47.227680397652996	0.4590463137409202	2				NaN	NaN	0	NaN	9508	3961	13467
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13472	35.842	NaN	3546.3	30	0	397.96	0.106			+	34613	RVPSVFNI	8	65	466.2713638793467	930.5281748254935	2	466.2710266113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RVPSVFNI_	REV__CTSC|p.F302Lfs*27|1|0.1|ENSG00000109861|chr11:88294495-88294496|-/A|frameshift_variant;REV__CTSC|p.N427Kfs*9|1|0.09|ENSG00000109861|chr11:88294117-88294118|-/T|frameshift_variant;REV__ENSG00000109861|ENST00000227266|CTSC	37.15910966729921	0.6739408393984688	2				NaN	NaN	0	NaN	9509	3961	13467
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13473	35.844	NaN	16282	30	0	4094.7	0.106	+			20376	KESTLHLVL	9	71	520.3110643722453	1038.6075758112904	2	520.8128662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KESTLHLVL_	ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000392399.3_1_2:137087013-137087097:-|nuORF;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;UBB|p.D191Tfs*35|2|0.18|ENSG00000170315|chr17:16382471-16382471|C/-|frameshift_variant;UBB|p.D191Tfs*35|2|0.18|ENSG00000170315|chr17:16382471-16382471|C/-|frameshift_variant	79.71258880314673	0.09879134589249085	2				NaN	NaN	0	NaN	9510	3961	13467
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13474	35.846	NaN	3169.8	30	0	409.61	0.034			+	10935	FDRGCLVI	8	64	461.7437048945222	921.4728568558444	2	461.7444763183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FDRGCLVI_	REV__ENST00000381714.7_1_15:77713264-77740077:+|nuORF	29.14955571784316	0.7342621283720113	2				NaN	NaN	0	NaN	9511	3961	13467
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13484	35.869	NaN	5897.2	30	0	1164.3	0.214	+			42335	TAGNKAALL	9	69	429.7558335265767	857.4971141199534	2	429.7554626464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAGNKAALL_	ENSG00000106299|ENST00000223023|WASL;WASL|p.V422Wfs*17|2|0.27|ENSG00000106299|chr7:123692431-123692431|T/-|frameshift_variant	42.396135135203025	0.392153681582562	2				NaN	NaN	0	NaN	9518	3964	13483
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13485	35.873	NaN	4042.3	30	0	420.72	0.106	+			1872	AILLPQPPK	9	62	488.8131162445864	975.6116795559728	2	488.8128356933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AILLPQPPK_	AluSp_dup17164|chr6:42889159-42889460:+|1.1128196386926228|0.1877517114460719|2.57|474.0|18|3|anti-sense;AluSx1_dup105715|chr19:17808831-17809133:-|1.057486810986726|0.069666496377167|3.92|481.0|18|3|anti-sense;AluY_dup35561|chr6:33300685-33300983:+|1.1748435911146424|0.1243112229828391|3.24|479.0|18|3|anti-sense;AluY_dup64372|chr11:882046-882337:+|1.6672929492750446|0.3489879065155246|2.26|478.0|12|1|anti-sense;ENST00000437681.1_1_1:28835797-28835884:+|nuORF;ENST00000452360.6_1_4:942397-950358:+|nuORF;ENST00000483835.5_1_11:5685320-5686489:-|nuORF;ENST00000496007.5_1_1:1324344-1326370:-|nuORF;ENST00000518164.5_1_8:99037863-99057595:-|nuORF;ENST00000567741.1_1_1:25644693-25663698:-|nuORF;ENST00000585457.5_1_17:42259005-42264009:-|nuORF;ENST00000591166.1_1_17:42259005-42263988:-|nuORF;ENST00000608290.1_1_22:46409584-46410459:+|nuORF;nc|ENSG00000132256|Q9C035-4|TRIM5;nc|ENSG00000137090|Q9Y5R6-3|DMRT1;nc|ENSG00000204370|O14521-4|SDHD	73.97473282117947	0.12360187025703594	2				NaN	NaN	0	NaN	9519	3964	13483
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13486	35.875	NaN	5413.6	30	0	1619.5	0.106			+	-1	AYFLHMVAH	9	60	368.8481767268375	1103.5227007807125	3	368.84796142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_AYFLHM(Oxidation (M))VAH_	REV__ENSG00000011376|ENST00000645846|LARS2;REV__LARS2|p.M583Wfs*51|2|0.31|ENSG00000011376|chr3:45500561-45500561|A/-|frameshift_variant	37.15910966729921	0.4535818937225704	2				NaN	NaN	0	NaN	9520	3964	13483
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13487	35.877	NaN	2664.8	30	0	553.22	0.106	+			3041	ASFIFKTLK	9	46	352.2143935858794	1053.6213513578382	3	352.2144775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASFIFKTLK_	ENST00000449503.6_1_3:57743439-57817152:+|nuORF	18.262085536374414	0.6112419832031293	2				NaN	NaN	0	NaN	9521	3964	13483
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13488	35.878	NaN	4000.8	30	0	1130.9	0.106			+	25866	LSFKAKQT	8	62	461.7715079456445	921.528462958089	2	461.7714538574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSFKAKQT_	REV__ENSG00000111404|ENST00000538724|RERGL;REV__nc|ENSG00000111404|Q9H628|RERGL	38.80614096846853	0.6637206697844082	2				NaN	NaN	0	NaN	9522	3964	13483
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13489	35.88	NaN	3186.1	30	0	508.81	0.106			+	-1	TYSTLMVGLI	10	67	557.2949540116855	1112.575355090171	2	557.29541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_TYSTLM(Oxidation (M))VGLI_	REV__ABCD2|p.D234G|1|0.25|ENSG00000173208|chr12:39618915-39618915|T/C|missense_variant	27.882242232435846	0.6521336255503853	2				NaN	NaN	0	NaN	9523	3964	13483
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13490	35.882	NaN	3590.3	30	0	863.29	0.037				-1	AYCGFLHPGV	10	51	374.17955405075884	1119.5168327524766	3	374.1797790527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_AYC(Carbamidomethyl (C))GFLHPGV_	PARG|p.R854H|1|0.49|ENSG00000227345|chr10:49832889-49832889|C/T|missense_variant	24.519189625965996	0.6795976720565101	2				NaN	NaN	0	NaN	9524	3964	13483
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13502	35.907	NaN	5629	30	0	932.91	0.214	+			11799	FSRSAKRR	8	53	336.534227507259	NaN	0	336.5342712402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FSRSAKRR_	ENSG00000165633|ENST00000332853|VSTM4;nc|ENSG00000165633|Q8IW00-2|VSTM4;VSTM4|p.A108Rfs*8|1|0.32|ENSG00000165633|chr10:49107729-49107729|C/-|frameshift_variant	28.2542754592877	1.7418937515398478	2				NaN	NaN	0	NaN	9533	3967	13501
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13503	35.911	NaN	11479	30	0	1268.3	0.106			+	50025	WDLSSSLKK	9	80	532.2920941793416	1062.569635425483	2	532.2933349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WDLSSSLKK_	REV__VARS|p.G435S|1|0.34|ENSG00000204394|chr6:31785290-31785290|C/T|missense_variant	49.44154591367651	0.3095138337212152	2				NaN	NaN	0	NaN	9534	3967	13501
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13504	35.913	NaN	5945.3	30	0	542.92	0.106	+			12799	GELYNEVKV	9	71	525.7776302617245	1049.540707590249	2	525.7777099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GELYNEVKV_	ENSG00000090273|ENST00000321265|NUDC	84.81729255234993	0.07947707105691067	2				NaN	NaN	0	NaN	9535	3967	13501
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13505	35.915	NaN	2848.9	30	0	947.32	0.106	+			21374	KMGRGKHFIG	10	51	377.54610110044484	1129.6164739015346	3	377.54620361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KMGRGKHFIG_	ENSG00000105705|ENST00000247001|SUGP1;ENST00000588731.6_1_19:19387459-19414804:-|nuORF;ENST00000589144.5_1_19:19387459-19413207:-|nuORF;ENST00000592188.1_1_19:19387459-19391209:-|nuORF	21.68575002086885	0.7027366847906487	2				NaN	NaN	0	NaN	9536	3967	13501
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13506	35.917	NaN	2713.5	30	0	413.61	0.106				-1	HPCLPKFAI	9	57	361.53287245002446	1081.5767879502735	3	361.532958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_HPC(Carbamidomethyl (C))LPKFAI_	PLSCR1|p.T218A|1|0.29|ENSG00000188313|chr3:146521630-146521630|T/C|missense_variant	37.15910966729921	0.4535818937225704	2				NaN	NaN	0	NaN	9537	3967	13501
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13507	35.918	NaN	3340.8	30	0	451.8	0.106			+	51204	YPPMPPQPGGP	11	62	569.2719148091616	NaN	0	569.2711181640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YPPMPPQPGGP_	REV__ENSG00000178719|ENST00000395068|GRINA	39.252832667884924	0.39048276625972167	2				NaN	NaN	0	NaN	9538	3967	13501
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13508	35.92	NaN	4317.5	30	0	554.16	0.037				-1	WGGITAASCTE	11	67	576.7532486494771	1151.491944365754	2	576.753662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_WGGITAASC(Carbamidomethyl (C))TE_	ENST00000294066.6_2_11:64552885-64553005:-|nuORF	31.529811441608018	0.6590691889962369	2				NaN	NaN	0	NaN	9539	3967	13501
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13520	35.946	NaN	8901.6	30	0	944.94	0.214	+			41063	SVIIPIKKL	9	74	505.85214432641646	1009.689735719633	2	505.85223388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVIIPIKKL_	ENSG00000170456|ENST00000389082|DENND5B;nc|ENSG00000170456|Q6ZUT9-2|DENND5B	47.95952297671804	0.32689736945648856	2				NaN	NaN	0	NaN	9548	3970	13519
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13521	35.95	NaN	5338.3	30	0	655.48	0.106			+	51277	YRTEQDKL	8	84	526.7729300233747	1051.5313071135492	2	526.7726440429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YRTEQDKL_	REV__ENST00000451871.1_1_13:42499863-42500601:+|nuORF	47.657333605630114	0.6087971902037268	2				NaN	NaN	0	NaN	9549	3970	13519
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13522	35.952	NaN	5042.4	30	0	1210.7	0.106			+	18592	ISQFNVSLI	9	71	340.8619280762116	1019.5639548288348	3	340.86199951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ISQFNVSLI_	REV__ENST00000420777.1_1_6:10415003-10415561:+|nuORF;REV__ENST00000443546.1_1_6:10414925-10415535:+|nuORF	42.86426827375447	0.38666266728046506	2				NaN	NaN	0	NaN	9550	3970	13519
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13523	35.954	NaN	5485.4	30	0	607.21	0.106	+			11676	FQVNHTVAL	9	60	514.7794025311234	1027.5442521290468	2	514.779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FQVNHTVAL_	ENSG00000130204|ENST00000426677|TOMM40;nc|ENSG00000130204|O96008-2|TOMM40	30.317721548370564	0.5199124245378496	2				NaN	NaN	0	NaN	9551	3970	13519
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13524	35.955	NaN	5871.9	30	0	2107.6	0.106	+			47983	VSPIRVNAL	9	63	484.7978800962462	967.5812072592925	2	484.79766845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSPIRVNAL_	ADAMTS9|p.C1222Lfs*15|1|0.3|ENSG00000163638|chr3:64604004-64604004|C/-|frameshift_variant;ADAMTS9|p.L487*|1|0.4|ENSG00000163638|chr3:64651020-64651020|A/-|frameshift_variant;ADAMTS9|p.S1884Ffs*2|1|0.35|ENSG00000163638|chr3:64533233-64533233|G/-|frameshift_variant;ENSG00000163638|ENST00000498707|ADAMTS9;ENST00000475557.5_1_3:64600969-64673333:-|nuORF;nc|ENSG00000163638|Q9P2N4-1|ADAMTS9;nc|ENSG00000163638|Q9P2N4-2|ADAMTS9;nc|ENSG00000163638|Q9P2N4-4|ADAMTS9	36.446750945000026	0.4619375763483977	2				NaN	NaN	0	NaN	9552	3970	13519
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13525	35.957	NaN	6507.2	30	0	1204.2	0.106			+	7013	CRTCTCPTARR	11	77	691.3163840976894	1380.6182152621786	2	691.3145751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))RTCTC(Carbamidomethyl (C))PTARR_	REV__ENST00000377401.3_1_6:27775545-27775608:-|nuORF	46.45678178249821	0.46959456050452836	2				NaN	NaN	0	NaN	9553	3970	13519
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13526	35.959	NaN	7130.7	30	0	727.88	0.036	+			6677	AYVHMVTHF	9	76	552.7682709412602	1103.5219889493203	2	552.770751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AYVHMVTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	60.29395666154354	0.21116425950210296	2				NaN	NaN	0	NaN	9554	3970	13519
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13538	35.985	NaN	4538.7	30	0	939.43	0.214			+	-1	LVLFLACQ	8	60	482.26996246468883	962.5253719961777	2	482.2700500488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_LVLFLAC(Carbamidomethyl (C))Q_	REV__ENSG00000135476|ENST00000257934|ESPL1;REV__ENST00000535123.6_1_12:53673494-53681766:+|nuORF;REV__ESPL1|p.Q1311Rfs*21|1|0.46|ENSG00000135476|chr12:53286668-53286669|AG/-|frameshift_variant;REV__nc|ENSG00000135476|Q14674-2|ESPL1	39.021493756699265	0.6623843612266921	2				NaN	NaN	0	NaN	9563	3973	13537
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13539	35.989	NaN	6757.5	30	0	1476.4	0.106	+			51119	YMQINQKNST	10	67	613.7947746321793	1225.5749963311584	2	613.7943115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YMQINQKNST_	ENST00000413300.1_1_3:43759941-43759998:+|nuORF	31.529811441608018	0.6223461015008678	2				NaN	NaN	0	NaN	9564	3973	13537
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13540	35.991	NaN	13286	30	0	1246	0.106	+			28802	NPHSQGLVTF	10	87	550.2798982242122	1098.5452435152242	2	550.280029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NPHSQGLVTF_	ENSG00000167608|ENST00000619895|TMC4;nc|ENSG00000167608|Q7Z404-1|TMC4;nc|ENSG00000167608|Q7Z404|TMC4;TMC4|p.F240Lfs*221|1|0.42|ENSG00000167608|chr19:54168267-54168268|AA/-|frameshift_variant;TMC4|p.Q383Rfs*6|1|0.37|ENSG00000167608|chr19:54163872-54163872|G/-|frameshift_variant	63.53385203322761	0.33370026130094593	2				NaN	NaN	0	NaN	9565	3973	13537
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13541	35.992	NaN	4813.4	30	0	1023.5	0.106	+			29593	PFQGQLDSI	9	63	502.7558994156037	1003.4972458980075	2	502.7561340332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PFQGQLDSI_	ENSG00000135678|ENST00000551568|CPM	84.9155231211612	0.07920012719736333	2				NaN	NaN	0	NaN	9566	3973	13537
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13542	35.994	NaN	2854.3	30	0	443.06	0.106				-1	 	0	63	412.8021677028378	823.5897824724756	2	412.8018798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9567	3973	13537
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13543	35.996	NaN	4269.7	30	0	339.59	0.106	+			10452	EVNKFQMAY	9	68	565.27122711778	1128.5279013023599	2	565.2708740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EVNKFQMAY_	ENSG00000140319|ENST00000267884|SRP14	82.30502934623384	0.08758161712619916	2				NaN	NaN	0	NaN	9568	3973	13537
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13544	35.998	NaN	4040.1	30	0	364	0.037	+			1119	AELNLRSNEL	10	69	579.8101416448628	NaN	0	579.8096313476562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AELNLRSNEL_	ENSG00000023191|ENST00000354420|RNH1;ENST00000525522.5_1_11:499827-504867:-|nuORF;ENST00000528713.5_1_11:500482-502162:-|nuORF;ENST00000531223.1_1_11:499763-502162:-|nuORF	86.88156770896713	0.06566165655540257	2				NaN	NaN	0	NaN	9569	3973	13537
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13555	36.024	NaN	8634.9	30	0	1306.9	0.214	+			36020	SEIFHSQSF	9	79	541.2514640721106	1080.488375211021	2	541.2515869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEIFHSQSF_	ENSG00000186522|ENST00000397712|SEPTIN10;ENST00000517342.1_1_8:57389388-57389772:-|nuORF;nc|ENSG00000186522|Q9P0V9-2|SEPTIN10;nc|ENSG00000186522|Q9P0V9-3|SEPTIN10	72.87924865735499	0.12833875048249987	2				NaN	NaN	0	NaN	9577	3976	13554
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13556	36.027	NaN	7245.5	30	0	409.11	0.106	+			15853	GYFGNPQKF	9	72	529.2588598479576	1056.5031667627152	2	529.2591552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GYFGNPQKF_	ENSG00000053747|ENST00000313654|LAMA3;LAMA3|p.E2016Rfs*13|1|0.27|ENSG00000053747|chr18:23901164-23901164|G/-|frameshift_variant;LAMA3|p.T2580Hfs*68|1|0.55|ENSG00000053747|chr18:23915376-23915376|A/-|frameshift_variant;nc|ENSG00000053747|Q16787-1|LAMA3;nc|ENSG00000053747|Q16787-3|LAMA3;nc|ENSG00000053747|Q16787-4|LAMA3	128.8611167810002	0.015835461597062447	2				NaN	NaN	0	NaN	9578	3976	13554
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13557	36.029	NaN	5878.1	30	0	665.53	0.106	+			27230	MEKVLAGETL	10	71	545.7949373296696	NaN	0	545.7951049804688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MEKVLAGETL_	ENSG00000129351|ENST00000588657|ILF3;ENST00000587928.5_1_19:10781281-10792148:+|nuORF;nc|ENSG00000129351|Q12906-2|ILF3;nc|ENSG00000129351|Q12906-3|ILF3;nc|ENSG00000129351|Q12906-4|ILF3;nc|ENSG00000129351|Q12906-5|ILF3;nc|ENSG00000129351|Q12906-6|ILF3;nc|ENSG00000129351|Q12906|ILF3	84.81729255234993	0.075755877015447	2				NaN	NaN	0	NaN	9579	3976	13554
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13558	36.031	NaN	5674.6	30	0	917.78	0.106				-1	AFKMMMAKK	9	70	559.2798472741454	1116.5451416150906	2	559.2801513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Oxidation (M)	_AFKM(Oxidation (M))M(Oxidation (M))MAKK_	ENSG00000165091|ENST00000297784|TMC1;TMC1|p.T228Pfs*42|1|0.41|ENSG00000165091|chr9:72754822-72754822|A/-|frameshift_variant	60.97194046774394	0.20551255781574032	2				NaN	NaN	0	NaN	9580	3976	13554
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13559	36.033	NaN	2985.6	30	0	473.26	0.106			+	21450	KNETAEKVL	9	66	516.2893883125203	1030.5642236918404	2	516.2905883789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KNETAEKVL_	REV__CEP290|p.R2306Nfs*40|1|0.14|ENSG00000198707|chr12:88055616-88055619|TCTC/-|frameshift_variant	54.776311868738084	0.25715957988447635	2				NaN	NaN	0	NaN	9581	3976	13554
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13560	36.035	NaN	3405.1	30	0	249.05	0.106			+	24819	LIRFLLNLYEQ	11	81	711.4068908941225	NaN	0	711.4071655273438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LIRFLLNLYEQ_	REV__VPS13C|p.D1359Y|1|0.16|ENSG00000129003|chr15:61958698-61958698|C/A|missense_variant	35.15202426646627	0.40875833226131825	2				NaN	NaN	0	NaN	9582	3976	13554
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13561	36.036	NaN	2958.1	30	0	335.67	0.038			+	26613	LTYSSLKASTK	11	62	599.8377816268977	1197.6610103205953	2	599.83740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LTYSSLKASTK_	REV__ENSG00000162739|ENST00000368057|SLAMF6;REV__nc|ENSG00000162739|Q96DU3-2|SLAMF6	32.61576334919814	0.6476784391172209	2				NaN	NaN	0	NaN	9583	3976	13554
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13572	36.062	NaN	7857.2	30	0	1021.7	0.214	+			15376	GTWIYSVNK	9	73	534.279890721293	1066.5452285093859	2	534.2798461914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTWIYSVNK_	ENSG00000101966|ENST00000371199|XIAP	132.757866228626	0.013877640931359021	2				NaN	NaN	0	NaN	9591	3979	13571
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13573	36.065	NaN	8071.2	30	0	747.46	0.106	+			46901	VISPHLKEY	9	78	543.3017644383809	1084.5889759435618	2	543.3028564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VISPHLKEY_	ENSG00000143341|ENST00000271588|HMCN1;HMCN1|p.S4801Rfs*11|1|0.07|ENSG00000143341|chr1:186145536-186145537|-/AGAATAA|frameshift_variant;nc|ENSG00000143341|Q96RW7-2|HMCN1	87.69643885390035	0.07135982304947239	2				NaN	NaN	0	NaN	9592	3979	13571
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13574	36.067	NaN	9788.3	30	0	793.9	0.106	+			41410	SVMSTVEWNK	10	85	590.7867626390233	1179.5589723448466	2	590.786865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVMSTVEWNK_	BZW1|p.S325Rfs*19|1|0.04|ENSG00000082153|chr2:200819989-200819990|-/ACAATATAGAA|frameshift_variant;ENSG00000082153|ENST00000409600|BZW1;nc|ENSG00000082153|Q7L1Q6-3|BZW1;nc|ENSG00000082153|Q7L1Q6-4|BZW1	181.4070731898895	0.0010958971522004144	2				NaN	NaN	0	NaN	9593	3979	13571
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13575	36.069	NaN	4690.8	30	0	915.82	0.106			+	-1	PIGCQNMKL	9	58	538.7648557615473	1075.5151585898946	2	538.7647705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_PIGC(Carbamidomethyl (C))QNM(Oxidation (M))KL_	REV__tr|U7T0U1|U7T0U1_FUSNUDNA-directedRNApolymerasesubunitbeta'OS=FusobacteriumnucleatumCTI-5OX=1316586GN=rpoCPE=3SV=1	47.91560031466742	0.327412564698279	2				NaN	NaN	0	NaN	9594	3979	13571
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13576	36.071	NaN	3051.7	30	0	477.34	0.106			+	36458	SEVLTRDVL	9	64	516.2893883125203	1030.5642236918404	2	516.2897338867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SEVLTRDVL_	REV__ACAN|p.P2306Lfs*10|1|0.42|ENSG00000157766|chr15:88860405-88860405|C/-|frameshift_variant;REV__ENSG00000157766|ENST00000560601|ACAN;REV__nc|ENSG00000157766|P16112-2|ACAN;REV__nc|ENSG00000157766|P16112-3|ACAN;REV__nc|ENSG00000157766|P16112|ACAN	39.252832667884924	0.4290233611298554	2				NaN	NaN	0	NaN	9595	3979	13571
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13577	36.073	NaN	4104.7	30	0	562.78	0.106				-1	SMPYHVCTL	9	69	554.2512402596124	1106.4879275860246	2	554.2528076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_SMPYHVC(Carbamidomethyl (C))TL_	ENSG00000025796|ENST00000369002|SEC63	42.396135135203025	0.392153681582562	2				NaN	NaN	0	NaN	9596	3979	13571
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13578	36.074	NaN	2588.2	30	0	432.92	0.036	+			29065	NTIGLIYEK	9	67	525.7951009129847	1049.5756488927693	2	525.7951049804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NTIGLIYEK_	ENSG00000183735|ENST00000331710|TBK1;ENST00000536906.1_1_12:64878248-64879302:+|nuORF;TBK1|p.I397Nfs*5|1|0.2|ENSG00000183735|chr12:64484493-64484494|-/A|frameshift_variant	46.45678178249821	0.34452392205506005	2				NaN	NaN	0	NaN	9597	3979	13571
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13589	36.1	NaN	11401	30	0	1494.1	0.214	+			7603	DKAGALAVLL	10	71	485.8001729953491	969.5857930574982	2	485.7999267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DKAGALAVLL_	PANX2|p.A39V|1|0.46|ENSG00000073150|chr22:50170846-50170846|C/T|missense_variant	56.72105179125745	0.3956618550748046	2				NaN	NaN	0	NaN	9605	3982	13588
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13590	36.103	NaN	15808	30	0	7635.5	0.106				-1	 	0	68	337.57032003788345	1009.6891307138503	3	337.5704345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9606	3982	13588
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13591	36.105	NaN	10783	30	0	1667	0.106	+			47956	VSMLNVYLK	9	83	541.7994397219104	NaN	0	541.799560546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_VSM(Oxidation (M))LNVYLK_	ENSG00000111775|ENST00000229379|COX6A1;ENST00000550009.1_1_12:120875908-120876378:+|nuORF	107.00750918261382	0.012399597248013027	2				NaN	NaN	0	NaN	9607	3982	13588
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13592	36.107	NaN	11776	30	0	4167.7	0.106	+			46785	VHGKMGRANSA	11	71	564.2899436521255	1126.565334371051	2	564.289794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VHGKMGRANSA_	ENSG00000169918|ENST00000307050|OTUD7A;nc|ENSG00000169918|Q8TE49|OTUD7A	56.43379154798735	0.3552884390983883	2				NaN	NaN	0	NaN	9608	3982	13588
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13593	36.109	NaN	6266.1	30	0	525.05	0.106	+			12631	GEIIGVKV	8	63	407.75543696173224	813.4963209902645	2	407.755126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GEIIGVKV_	ENSG00000180817|ENST00000373232|PPA1	87.75429964447693	0.2842685068779738	2				NaN	NaN	0	NaN	9609	3982	13588
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13594	36.111	NaN	3916.6	30	0	675.04	0.106				-1	TARMLLPSRG	10	70	373.209269535556	1116.6059792068681	3	373.2094421386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_TARM(Oxidation (M))LLPSRG_	ENST00000541015.5_1_19:1854354-1854450:-|nuORF	17.833141474888023	0.725831738385857	2				NaN	NaN	0	NaN	9610	3982	13588
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13595	36.112	NaN	2991	30	0	269.98	0.039	+			37502	SLLEEQFQQGK	11	75	653.8354546068026	1305.6563562804051	2	653.8355102539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SLLEEQFQQGK_	ENSG00000142937|ENST00000396651|RPS8;ENST00000484599.1_1_1:45243370-45243842:+|nuORF	112.2953585152457	0.03526820493220478	2				NaN	NaN	0	NaN	9611	3982	13588
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13606	36.138	NaN	8438.6	30	0	1277.1	0.214				-1	 	0	75	523.2742420822179	1044.5339312312358	2	523.2742919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9619	3985	13605
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13607	36.142	NaN	3901.5	30	0	844.2	0.106	+			51477	YVHLSEAVL	9	71	515.781897962571	1029.5492429919418	2	515.7804565429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YVHLSEAVL_	ENSG00000171804|ENST00000447313|WDR87;nc|ENSG00000171804|Q6ZQQ6-2|WDR87;nc|ENSG00000171804|Q6ZQQ6|WDR87;WDR87|p.A2794Pfs*4|1|0.26|ENSG00000171804|chr19:37885175-37885175|T/-|frameshift_variant;WDR87|p.K2720Rfs*57|5|0.35|ENSG00000171804|chr19:37885395-37885395|T/-|frameshift_variant;WDR87|p.Q1927Tfs*32|1|0.44|ENSG00000171804|chr19:37887775-37887776|-/T|frameshift_variant;WDR87|p.R2063Gfs*11|1|0.12|ENSG00000171804|chr19:37887367-37887367|T/-|frameshift_variant;WDR87|p.R2063Kfs*25|1|0.32|ENSG00000171804|chr19:37887366-37887367|-/T|frameshift_variant	50.0245360154114	0.3026755932229825	2				NaN	NaN	0	NaN	9620	3985	13605
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13608	36.144	NaN	3174.6	30	0	618.9	0.106			+	7478	DGAVFLQVL	9	67	481.27094175940414	960.5273305856083	2	481.2710876464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DGAVFLQVL_	REV__ENSG00000187741|ENST00000389301|FANCA;REV__ENST00000562424.1_1_16:89805011-89806109:-|nuORF;REV__nc|ENSG00000187741|O15360-3|FANCA	58.78195531508484	0.22376836668196862	2				NaN	NaN	0	NaN	9621	3985	13605
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13609	36.145	NaN	3226.5	30	0	512.4	0.106	+			19734	KDVAVMQL	8	64	452.2525353859166	902.4905178386332	2	452.25201416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KDVAVMQL_	ENSG00000122218|ENST00000241704|COPA;nc|ENSG00000122218|P53621-2|COPA	36.446750945000026	0.6783611724927969	2				NaN	NaN	0	NaN	9622	3985	13605
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13610	36.147	NaN	2536.3	30	0	993.52	0.106				-1	ACLAAVRMAP	10	49	340.1769123949359	NaN	0	340.1769104003906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_ACLAAVRM(Oxidation (M))AP_	ENST00000568223.6_1_16:767500-767908:+|nuORF	18.262085536374414	0.4201028297492154	2				NaN	NaN	0	NaN	9623	3985	13605
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13611	36.149	NaN	2636.8	30	0	702.98	0.106			+	10065	ESHEEWWPGL	10	52	635.2830810546875	NaN	0	635.2830810546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ESHEEWWPGL_	REV__ENST00000574212.1_1_16:15826501-15826636:+|nuORF	20.94693142431847	0.4201028297492154	2				NaN	NaN	0	NaN	9624	3985	13605
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13612	36.151	NaN	2346.5	30	0	251.04	0.037			+	51257	YQVLGSLGHY	10	67	568.7920761473061	1135.5695993614122	2	568.7911987304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YQVLGSLGHY_	REV__ENSG00000110455|ENST00000263776|ACCS;REV__ENST00000527346.5_1_11:44101033-44105339:+|nuORF;REV__ENST00000532122.5_1_11:44101033-44103652:+|nuORF;REV__ENST00000534035.1_1_11:44102597-44105415:+|nuORF	47.657333605630114	0.47858658696240314	2				NaN	NaN	0	NaN	9625	3985	13605
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13623	36.177	NaN	10316	30	0	1001.8	0.214	+			51325	YSLVSREL	8	71	483.7659910149449	965.5174290966899	2	483.7660217285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YSLVSREL_	ENSG00000119777|ENST00000238788|TMEM214	115.49404669440601	0.24099756539272307	2				NaN	NaN	0	NaN	9633	3988	13622
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13624	36.18	NaN	4974	30	0	589.43	0.106	+			21651	KPVDPIVGY	9	69	494.27898662511694	986.5434203170339	2	494.27874755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KPVDPIVGY_	COL12A1|p.F2273Lfs*20|1|0.26|ENSG00000111799|chr6:75124000-75124000|A/-|frameshift_variant;COL12A1|p.G2777Wfs*37|1|0.15|ENSG00000111799|chr6:75102684-75102685|-/G|frameshift_variant;COL12A1|p.G3027Wfs*19|1|0.1|ENSG00000111799|chr6:75087680-75087681|-/G|frameshift_variant;COL12A1|p.I210Nfs*4|1|0.18|ENSG00000111799|chr6:75189581-75189582|-/T|frameshift_variant;COL12A1|p.I57T|1|0.14|ENSG00000111799|chr6:75194851-75194851|A/G|missense_variant;COL12A1|p.L2085Hfs*4|1|0.22|ENSG00000111799|chr6:75128382-75128383|-/T|frameshift_variant;COL12A1|p.P2307Lfs*21|1|0.25|ENSG00000111799|chr6:75123356-75123356|G/-|frameshift_variant;COL12A1|p.R56I|1|0.31|ENSG00000111799|chr6:75194854-75194854|C/A|missense_variant;COL12A1|p.T1046Qfs*7|2|0.22|ENSG00000111799|chr6:75156372-75156372|G/-|frameshift_variant;ENSG00000111799|ENST00000322507|COL12A1;nc|ENSG00000111799|Q99715-4|COL12A1	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	9634	3988	13622
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13625	36.182	NaN	9072.3	30	0	868.52	0.106			+	-1	LCGQVMCPY	9	82	535.7278959706521	1069.441239008104	2	535.7281494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LCGQVMC(Carbamidomethyl (C))PY_	REV__ENSG00000117000|ENST00000372771|RLF;REV__RLF|p.N1741Ifs*21|1|0.18|ENSG00000117000|chr1:40239919-40239919|A/-|frameshift_variant;REV__RLF|p.V1739Kfs*12|1|0.09|ENSG00000117000|chr1:40239916-40239917|TG/-|frameshift_variant	40.5726180659479	0.4135428067754104	2				NaN	NaN	0	NaN	9635	3988	13622
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13626	36.184	NaN	4558.9	30	0	533.96	0.106			+	7591	DIQLTQVAL	9	69	500.78751544860876	999.5604779640175	2	500.7875671386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DIQLTQVAL_	REV__ENSG00000131697|ENST00000378156|NPHP4;REV__nc|ENSG00000131697|O75161-2|NPHP4	46.45678178249821	0.34452392205506005	2				NaN	NaN	0	NaN	9636	3988	13622
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13627	36.186	NaN	5853.3	30	0	608.79	0.106	+			25612	LQNEPLPERL	10	75	604.835614534727	1207.656676136254	2	604.835205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LQNEPLPERL_	ENSG00000124214|ENST00000371856|STAU1;nc|ENSG00000124214|O95793-2|STAU1;nc|ENSG00000124214|O95793-3|STAU1	117.81106730687013	0.030421278947300796	2				NaN	NaN	0	NaN	9637	3988	13622
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13628	36.188	NaN	2981.9	30	0	241.96	0.106	+			12674	GEIVIKNL	8	63	443.2741634599211	884.5337739866422	2	443.2738342285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GEIVIKNL_	ENSG00000070882|ENST00000313367|OSBPL3;ENST00000409863.5_1_7:24839804-24873723:-|nuORF;nc|ENSG00000070882|Q9H4L5-2|OSBPL3;nc|ENSG00000070882|Q9H4L5-3|OSBPL3;nc|ENSG00000070882|Q9H4L5-4|OSBPL3	84.9155231211612	0.2928622555056503	2				NaN	NaN	0	NaN	9638	3988	13622
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13629	36.189	NaN	4287	30	0	618.9	0.035	+			42870	TEGRITDVI	9	71	502.2740801950167	NaN	0	502.2744445800781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TEGRITDVI_	CON__P41361;ENSG00000117601|ENST00000367698|SERPINC1	52.167168403610894	0.19175783337620167	2				NaN	NaN	0	NaN	9639	3988	13622
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13641	36.215	NaN	16552	30	0	4394.6	0.214	+			20377	KESTLHLVL	9	72	520.3110643722453	1038.6075758112904	2	520.310791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KESTLHLVL_	ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000392399.3_1_2:137087013-137087097:-|nuORF;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;UBB|p.D191Tfs*35|2|0.18|ENSG00000170315|chr17:16382471-16382471|C/-|frameshift_variant;UBB|p.D191Tfs*35|2|0.18|ENSG00000170315|chr17:16382471-16382471|C/-|frameshift_variant	95.81516180277367	0.04847050768394289	2				NaN	NaN	0	NaN	9648	3991	13640
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13642	36.219	NaN	20200	30	0	4547.2	0.106				-1	VSFCLVMVL	9	82	542.282526063595	1082.55049919399	2	542.2825927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_VSFC(Carbamidomethyl (C))LVM(Oxidation (M))VL_	ENSG00000162747|ENST00000650385|FCGR3B;ENSG00000203747|ENST00000443193|FCGR3A	68.484700416344	0.1473408039581241	2				NaN	NaN	0	NaN	9649	3991	13640
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13643	36.221	NaN	21153	30	0	4196.1	0.106	+			118	AAFDGGFTVK	10	84	506.7582809366175	1011.502008940035	2	506.7580871582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AAFDGGFTVK_	ENSG00000102910|ENST00000285737|LONP2;ENST00000564259.1_1_16:48382051-48395504:+|nuORF;nc|ENSG00000102910|Q86WA8-2|LONP2	89.02883481214508	0.13663399911061233	2				NaN	NaN	0	NaN	9650	3991	13640
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13644	36.223	NaN	16356	30	0	3170.9	0.106			+	10531	EWIFCLSTA	9	85	535.2537461478369	1068.4929393624736	2	535.2530517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EWIFCLSTA_	REV__ENST00000366663.9_1_1:230972959-230973187:-|nuORF	63.30626980617807	0.18605348971131092	2				NaN	NaN	0	NaN	9651	3991	13640
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13645	36.224	NaN	7881.9	30	0	1111.2	0.106			+	2157	ALLLLLPHS	9	74	488.8131162445864	975.6116795559728	2	488.8127136230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ALLLLLPHS_	REV__ENST00000483923.5_1_10:100170623-100171145:-|nuORF	60.29395666154354	0.21116425950210296	2				NaN	NaN	0	NaN	9652	3991	13640
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13646	36.226	NaN	7323.5	30	0	1006.6	0.106	+			3478	ASSFGNMIYK	10	84	559.2713218887112	1116.5280908442223	2	559.2710571289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASSFGNMIYK_	ENSG00000120137|ENST00000239231|PANK3	65.46538089061403	0.31613324008013116	2				NaN	NaN	0	NaN	9653	3991	13640
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13647	36.228	NaN	5813.7	30	0	864.07	0.037	+			49582	VYERELQTF	9	76	592.8006026651997	1183.5866523971993	2	592.8011474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VYERELQTF_	ENSG00000203791|ENST00000368836|EEF1AKMT2	56.632244143249146	0.24168844994051353	2				NaN	NaN	0	NaN	9654	3991	13640
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13657	36.251	NaN	9888.8	30	0	2083.1	0.214	+			14080	GSLFLQTPK	9	65	495.7845953019074	989.5546376706149	2	495.7842712402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSLFLQTPK_	ENSG00000111716|ENST00000350669|LDHB;ENST00000470280.1_1_12:21796836-21807485:-|nuORF	102.0615471778698	0.03709830720253279	2				NaN	NaN	0	NaN	9661	3994	13656
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13658	36.255	NaN	17900	30	0	1774.4	0.106	+			4581	ATLGAILNR	9	80	464.7812522289113	927.5479515246226	2	464.7805480957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATLGAILNR_	ENSG00000156515|ENST00000359426|HK1;ENST00000494253.1_1_10:71098016-71144300:+|nuORF;HK1|p.R398H|1|0.04|ENSG00000156515|chr10:69380023-69380023|G/A|missense_variant;nc|ENSG00000156515|P19367-2|HK1;nc|ENSG00000156515|P19367-3|HK1;nc|ENSG00000156515|P19367-4|HK1	115.49404669440601	0.023927554121326553	2				NaN	NaN	0	NaN	9662	3994	13656
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13659	36.257	NaN	7066.7	30	0	1513.2	0.106				-1	ASMKKVKSL	9	65	336.534227507259	NaN	0	336.5341491699219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_ASM(Oxidation (M))KKVKSL_	ENST00000369426.9_1_1:119575536-119588262:-|nuORF	34.172542307311794	0.30503706118289736	2				NaN	NaN	0	NaN	9663	3994	13656
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13660	36.258	NaN	12017	30	0	2059.5	0.106			+	-1	LDTENMISGD	10	72	555.735365027353	1109.456177121506	2	555.7352905273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_LDTENM(Oxidation (M))ISGD_	REV__ENSG00000145817|ENST00000274496|YIPF5;REV__ENSG00000177752|ENST00000415895|YIPF7;REV__ENST00000508754.1_1_5:143543641-143549519:-|nuORF;REV__nc|ENSG00000145817|Q969M3-2|YIPF5;REV__nc|ENSG00000145817|Q969M3-3|YIPF5;REV__nc|ENSG00000177752|Q8N8F6-2|YIPF7	64.20726635412375	0.3275756395432415	2				NaN	NaN	0	NaN	9664	3994	13656
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13661	36.26	NaN	10530	30	0	1539.5	0.106				-1	CPGCKTSSSTA	11	82	549.7304551719284	1097.4463574106567	2	549.73046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_CPGC(Carbamidomethyl (C))KTSSSTA_	ENST00000262093.9_1_18:55240552-55247394:-|nuORF	44.377184641726394	0.49804979881800077	2				NaN	NaN	0	NaN	9665	3994	13656
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13662	36.262	NaN	12429	30	0	1216.2	0.106	+			38110	SPVSKGILQY	10	92	546.3085669946702	1090.6025810561403	2	546.3087158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SPVSKGILQY_	ENSG00000167325|ENST00000300738|RRM1	91.26522074875469	0.12383023862516404	2				NaN	NaN	0	NaN	9666	3994	13656
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13663	36.264	NaN	4128.1	30	0	1124.3	0.037			+	-1	SIMFPVGDMA	10	54	361.8343060174518	NaN	0	361.8340148925781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_SIMFPVGDM(Oxidation (M))A_	REV__ENSG00000196814|ENST00000361171|MVB12B	36.446750945000026	0.3805027428805705	2				NaN	NaN	0	NaN	9667	3994	13656
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13674	36.289	NaN	22356	30	0	3958.4	0.214	+			14081	GSLFLQTPK	9	81	495.7845953019074	989.5546376706149	2	495.78460693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSLFLQTPK_	ENSG00000111716|ENST00000350669|LDHB;ENST00000470280.1_1_12:21796836-21807485:-|nuORF	95.4829727501206	0.04940705645337811	2				NaN	NaN	0	NaN	9675	3997	13673
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13675	36.292	NaN	15176	30	0	1978.9	0.106	+			45568	TYMGHTGAVW	10	91	561.7557701714692	1121.4969874097383	2	561.7550659179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TYMGHTGAVW_	ENSG00000084623|ENST00000677711|EIF3I;ENST00000474371.1_1_1:32688150-32694122:+|nuORF;ENST00000489353.5_1_1:32688042-32691823:+|nuORF	101.60071028292904	0.07294315263144992	2				NaN	NaN	0	NaN	9676	3997	13673
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13676	36.294	NaN	7846.4	30	0	1260.8	0.106			+	7575	DIKLPLKVL	9	75	346.90176962560747	1037.6834794770225	3	346.9024658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DIKLPLKVL_	REV__ENSG00000104047|ENST00000403028|DTWD1	98.58198989935565	0.04066992115528678	2				NaN	NaN	0	NaN	9677	3997	13673
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13677	36.296	NaN	12362	30	0	2028.2	0.106				-1	LQMAVMVME	9	73	542.2482119586398	1082.4818709840795	2	542.2481079101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Oxidation (M)	_LQM(Oxidation (M))AVM(Oxidation (M))VME_	nc|ENSG00000197891|Q96S37-4|SLC22A12	42.396135135203025	0.392153681582562	2				NaN	NaN	0	NaN	9678	3997	13673
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13678	36.298	NaN	10762	30	0	1979.5	0.106	+			24840	LIYVAGGLTK	10	75	517.8156624596062	1033.6167719860123	2	517.8156127929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LIYVAGGLTK_	ENSG00000114796|ENST00000242810|KLHL24;nc|ENSG00000114796|Q6TFL4-2|KLHL24	42.86426827375447	0.522752283233888	2				NaN	NaN	0	NaN	9679	3997	13673
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13679	36.3	NaN	10556	30	0	1392.9	0.106	+			943	AEIRHVLVTL	10	80	575.8511158181335	1149.687678703067	2	575.8518676757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEIRHVLVTL_	ENSG00000092841|ENST00000550697|MYL6;ENST00000548725.5_1_12:56552185-56553955:+|nuORF;nc|ENSG00000092841|P60660-2|MYL6	76.16968421966216	0.22691431239609447	2				NaN	NaN	0	NaN	9680	3997	13673
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13680	36.302	NaN	7969.8	30	0	664.03	0.036	+			7596	DITVYEMTD	9	69	551.7328606733832	1101.4511684135664	2	551.7340698242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_DITVYEM(Oxidation (M))TD_	tr|U7STH1|U7STH1_FUSNUNADHoxidaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01482PE=3SV=1	63.30626980617807	0.18605348971131092	2				NaN	NaN	0	NaN	9681	3997	13673
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13693	36.328	NaN	25795	30	0	5078.3	0.142	+			49607	VYGSFASKL	9	83	486.26332401186215	970.5120950905243	2	486.26348876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYGSFASKL_	ENSG00000155096|ENST00000337198|AZIN1	117.81106730687013	0.02252488733980868	2				NaN	NaN	0	NaN	9691	4000	13692
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13705	36.355	NaN	12377	30	0	1030	0.214	+			17597	IEFKETQAL	9	85	539.7929809462404	1077.5714089592807	2	539.7926635742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IEFKETQAL_	EIF4A2|p.Q209Lfs*23|1|0.03|ENSG00000156976|chr3:186786269-186786270|-/ACTGTCATTTCTAGATCTAC|frameshift_variant;ENSG00000156976|ENST00000323963|EIF4A2;ENST00000465032.5_1_3:186501384-186502902:+|nuORF;ENST00000465267.5_1_3:186501384-186502902:+|nuORF;ENST00000485101.5_1_3:186502728-186502902:+|nuORF;nc|ENSG00000156976|Q14240-2|EIF4A2	96.0336014099291	0.047854655524928534	2				NaN	NaN	0	NaN	9700	4003	13704
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13706	36.359	NaN	9683.8	30	0	1127.9	0.036	+			47480	VQCPVFNIK	9	77	552.7977827140605	1103.581012494921	2	552.7974243164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_VQC(Carbamidomethyl (C))PVFNIK_	ENST00000310015.10_1_2:174820725-174820848:-|nuORF	51.33545320467046	0.2872990594074956	2				NaN	NaN	0	NaN	9701	4003	13704
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13719	36.385	NaN	16018	30	0	3720.2	0.214	+			14892	GTLSSWNLK	9	65	503.273504083646	1004.532455234092	2	503.2718200683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTLSSWNLK_	ENST00000380319.2_1_X:15782817-15782931:+|nuORF;ENST00000380334.6_1_X:15706900-15721312:+|nuORF;ENST00000380336.5_1_X:15706900-15715389:+|nuORF;ENST00000435806.2_1_X:15706900-15713817:+|nuORF;nc|ENSG00000290746|Q8WTZ4|CA5BP1	154.1183686248401	0.005909203230691971	2				NaN	NaN	0	NaN	9711	4006	13718
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13720	36.389	NaN	9371.9	30	0	1164.9	0.106	+			10640	EYPDRIMNTF	10	75	651.294883676214	1300.575214419228	2	651.2948608398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_EYPDRIM(Oxidation (M))NTF_	ENSG00000137267|ENST00000333628|TUBB2A;ENSG00000137285|ENST00000259818|TUBB2B;ENSG00000188229|ENST00000340384|TUBB4B;ENSG00000196230|ENST00000327892|TUBB;ENSG00000258947|ENST00000315491|TUBB3;ENST00000518096.1_1_8:30209523-30210210:+|nuORF;ENST00000604929.1_1_9:140136931-140138005:+|nuORF;nc|ENSG00000258947|Q13509-2|TUBB3;TUBB2B|p.D177Hfs*21|1|0.32|ENSG00000137285|chr6:3225559-3225560|TC/-|frameshift_variant;TUBB2B|p.S168N|1|0.15|ENSG00000137285|chr6:3225586-3225586|C/T|missense_variant	190.62248201133156	0.00017197548059753575	2				NaN	NaN	0	NaN	9712	4006	13718
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13721	36.391	NaN	13911	30	0	1495.7	0.106	+			3400	ASQELWLNH	9	87	549.2723017007522	1096.5300504683044	2	549.2723999023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASQELWLNH_	ENSG00000105732|ENST00000359044|ZNF574;nc|ENSG00000105732|Q6ZN55-2|ZNF574	131.61620852596164	0.014413238321579053	2				NaN	NaN	0	NaN	9713	4006	13718
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13722	36.393	NaN	3225.1	30	0	995.39	0.106	+			21867	KRLPLFYTL	9	59	384.2359619140625	NaN	0	384.2359619140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KRLPLFYTL_	ENSG00000169684|ENST00000299565|CHRNA5	26.69291269510374	0.34280015626154364	2				NaN	NaN	0	NaN	9714	4006	13718
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13723	36.395	NaN	19719	30	0	9506.8	0.106	+			37594	SLPKKLALL	9	81	491.8357249874369	NaN	0	491.8358154296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SLPKKLALL_	ENSG00000104979|ENST00000588234|C19orf53;ENST00000588858.5_1_19:13886394-13889009:+|nuORF	29.14955571784316	0.3303970763161698	2				NaN	NaN	0	NaN	9715	4006	13718
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13724	36.396	NaN	3961.7	30	0	486.22	0.106	+			49261	VVPEPGTSL	9	66	449.74664306640625	NaN	0	449.74664306640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VVPEPGTSL_	ENSG00000092964|ENST00000521913|DPYSL2;nc|ENSG00000092964|Q16555-2|DPYSL2;nc|ENSG00000092964|Q16555|DPYSL2	79.45101966838831	0.07326487554222888	2				NaN	NaN	0	NaN	9716	4006	13718
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13725	36.398	NaN	4497.5	30	0	1220.5	0.037			+	-1	PHSVSRKMM	9	61	368.8476165477746	1103.5210202435237	3	368.8475341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Oxidation (M)	_PHSVSRKM(Oxidation (M))M(Oxidation (M))_	REV__ENSG00000116095|ENST00000234453|PLEKHA3	26.69291269510374	0.5537881896960711	2				NaN	NaN	0	NaN	9717	4006	13718
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13737	36.424	NaN	18986	30	0	3173.9	0.214	+			43439	TGLGKYFQ	8	83	457.2427394207395	912.470925908279	2	457.2422180175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TGLGKYFQ_	ENSG00000180881|ENST00000699294|CAPS2;ENST00000409004.5_1_12:75670025-75710066:-|nuORF;nc|ENSG00000180881|Q9BXY5-2|CAPS2;nc|ENSG00000180881|Q9BXY5-3|CAPS2;nc|ENSG00000180881|Q9BXY5-5|CAPS2;nc|ENSG00000180881|Q9BXY5|CAPS2	94.00642277110589	0.2653416297186628	2				NaN	NaN	0	NaN	9726	4009	13736
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13738	36.427	NaN	11461	30	0	3083	0.106			+	1259	AESAEVDGLA	10	72	481.2275967783056	960.4406406234112	2	481.2278137207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AESAEVDGLA_	REV__ENSG00000075702|ENST00000401500|WDR62;REV__nc|ENSG00000075702|O43379|WDR62	68.78682469695295	0.28723163847957256	2				NaN	NaN	0	NaN	9727	4009	13736
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13739	36.429	NaN	15062	30	0	1297.3	0.106	+			2354	AMYTYFQAK	9	99	561.767419888334	1121.5202868434678	2	561.7674560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AMYTYFQAK_	ENSG00000116260|ENST00000367602|QSOX1	107.00750918261382	0.032051501805654005	2				NaN	NaN	0	NaN	9728	4009	13736
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13740	36.431	NaN	7595.2	30	0	2882.1	0.106			+	-1	SMKRGDQLL	9	63	355.19027965609513	1062.5490095684854	3	355.19036865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_SM(Oxidation (M))KRGDQLL_	REV__ENSG00000173227|ENST00000527043|SYT12;REV__SYT12|p.K337N|1|0.24|ENSG00000173227|chr11:67045796-67045796|G/T|missense_variant	32.81241826257853	0.4965981579233955	2				NaN	NaN	0	NaN	9729	4009	13736
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13741	36.433	NaN	3410.4	30	0	239.79	0.106	+			24684	LHALAAGF	8	50	400.22695120684216	798.4393494804843	2	400.2270202636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LHALAAGF_	ENSG00000022976|ENST00000442396|ZNF839;ENST00000557803.5_1_14:102802004-102808513:+|nuORF;nc|ENSG00000022976|A8K0R7|ZNF839;ZNF839|p.Q768Rfs*33|1|0.25|ENSG00000022976|chr14:102342046-102342047|AG/-|frameshift_variant	33.49298260027079	0.7007254697536482	2				NaN	NaN	0	NaN	9730	4009	13736
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13742	36.435	NaN	1622.4	30	0	271.48	0.106	+			35224	SALASSTGK	9	61	411.2225132408527	NaN	0	411.22247314453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SALASSTGK_	ENST00000409028.8_1_2:101635554-101635701:+|nuORF	27.882242232435846	0.3367954786602879	2				NaN	NaN	0	NaN	9731	4009	13736
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13743	36.436	NaN	5399.2	30	0	487.61	0.038				-1	KWPVLPLSLC	10	77	606.8453762287972	1211.6761995243944	2	606.8446044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_KWPVLPLSLC(Carbamidomethyl (C))_	ENST00000377897.8_1_11:62574818-62575010:-|nuORF	29.14955571784316	0.6417842315402807	2				NaN	NaN	0	NaN	9732	4009	13736
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13756	36.464	NaN	6029.3	30	0	384.66	0.214			+	9439	EKLAQLQEQL	10	79	600.3351908108716	1198.6558286885431	2	600.3348999023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EKLAQLQEQL_	REV__ENSG00000137497|ENST00000393695|NUMA1;REV__nc|ENSG00000137497|Q14980-2|NUMA1;REV__nc|ENSG00000137497|Q14980-3|NUMA1;REV__nc|ENSG00000137497|Q14980-4|NUMA1;REV__NUMA1|p.K1766Rfs*2|1|0.39|ENSG00000137497|chr11:72007357-72007357|G/-|frameshift_variant;REV__NUMA1|p.L1786Pfs*18|1|0.23|ENSG00000137497|chr11:72007295-72007296|-/G|frameshift_variant	161.51181693189292	0.006384248322647003	2				NaN	NaN	0	NaN	9742	4012	13755
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13757	36.467	NaN	3364.1	30	0	363.62	0.106	+			11754	FSIAGIDIAI	10	74	510.292184508004	1018.5698160828081	2	510.2917175292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FSIAGIDIAI_	tr|U7SU34|U7SU34_FUSNUTIGR02206familymembraneproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01004PE=4SV=1	51.33545320467046	0.4446945571623749	2				NaN	NaN	0	NaN	9743	4012	13755
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13758	36.469	NaN	3656.8	30	0	574.01	0.106	+			40520	STYTPENLLNK	11	70	640.3301904121686	NaN	0	640.33056640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STYTPENLLNK_	ENSG00000168672|ENST00000304916|LRATD2	54.722347961057174	0.2814010645723107	2				NaN	NaN	0	NaN	9744	4012	13755
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13759	36.471	NaN	5047.5	30	0	483.44	0.106	+			28885	NQFRFVGNA	9	77	526.7662150059411	NaN	0	526.766357421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NQFRFVGNA_	ENSG00000143515|ENST00000368489|ATP8B2;nc|ENSG00000143515|P98198-3|ATP8B2;nc|ENSG00000143515|P98198|ATP8B2	53.351449002276354	0.18359631779194618	2				NaN	NaN	0	NaN	9745	4012	13755
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13760	36.473	NaN	2103.4	30	0	543.61	0.106			+	33297	RGPPPKGRGL	10	60	345.5454298361936	NaN	0	345.5459289550781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RGPPPKGRGL_	REV__nc|ENSG00000120913|Q96JY6-2|PDLIM2	24.20275056022122	0.4201028297492154	2				NaN	NaN	0	NaN	9746	4012	13755
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13761	36.475	NaN	3771.5	30	0	778.98	0.037				-1	YAFFECKR	8	59	374.17967441869223	1119.5171938562767	3	374.18023681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_YAFFEC(Carbamidomethyl (C))KR_	ENSG00000183513|ENST00000328709|COA5;ENST00000466848.1_1_2:99217217-99222254:-|nuORF;ENST00000483527.5_1_2:99217217-99224734:-|nuORF	26.79610172149135	0.7524337208463756	2				NaN	NaN	0	NaN	9747	4012	13755
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13772	36.5	NaN	23953	30	0	5646.2	0.214	+			774	AEEVVKIEE	9	74	523.2742420822179	1044.5339312312358	2	523.2744750976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEEVVKIEE_	DYNC2H1|p.L4021Wfs*5|1|0.3|ENSG00000187240|chr11:103358262-103358262|T/-|frameshift_variant;DYNC2H1|p.P3966Hfs*44|1|0.22|ENSG00000187240|chr11:103321194-103321194|T/-|frameshift_variant;ENSG00000187240|ENST00000375735|DYNC2H1;nc|ENSG00000187240|Q8NCM8-2|DYNC2H1	74.25504064058377	0.12238981753128622	2				NaN	NaN	0	NaN	9755	4015	13771
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13773	36.504	NaN	15622	30	0	2253.7	0.106	+			49744	VYNTATNQW	9	80	548.756882488883	NaN	0	548.7568359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYNTATNQW_	ENSG00000111727|ENST00000229330|HCFC2;ENSG00000172534|ENST00000310441|HCFC1;HCFC1|p.L913Wfs*11|1|0.39|ENSG00000172534|chrX:153956309-153956309|A/-|frameshift_variant;HCFC1|p.P1894Lfs*22|1|0.06|ENSG00000172534|chrX:153950835-153950835|G/-|frameshift_variant;HCFC1|p.P367Qfs*16|1|0.4|ENSG00000172534|chrX:153960146-153960146|G/-|frameshift_variant;HCFC1|p.P456Rfs*34|1|0.39|ENSG00000172534|chrX:153959879-153959879|G/-|frameshift_variant;HCFC2|p.A339Hfs*2|1|0.43|ENSG00000111727|chr12:104082847-104082847|A/-|frameshift_variant;HCFC2|p.N309Ifs*32|4|0.23|ENSG00000111727|chr12:104082757-104082757|A/-|frameshift_variant;nc|ENSG00000111727|Q9Y5Z7-2|HCFC2;nc|ENSG00000172534|P51610-2|HCFC1;nc|ENSG00000172534|P51610-3|HCFC1;nc|ENSG00000172534|P51610-4|HCFC1	136.26810882979174	0.0003037181779624456	2				NaN	NaN	0	NaN	9756	4015	13771
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13774	36.506	NaN	6006.3	30	0	653.94	0.106	+			27423	MLALVSDNTV	10	69	531.7783511812887	1061.5421494293773	2	531.7782592773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MLALVSDNTV_	CON__P07224	51.52775601994872	0.4429225830406686	2				NaN	NaN	0	NaN	9757	4015	13771
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13775	36.508	NaN	3591.1	30	0	296.8	0.106			+	7676	DLERAWVDT	9	66	552.7689189877552	NaN	0	552.7682495117188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DLERAWVDT_	REV__EIF4A3|p.G340E|1|0.17|ENSG00000141543|chr17:80136300-80136300|C/T|missense_variant	65.46538089061403	0.1260090208616529	2				NaN	NaN	0	NaN	9758	4015	13771
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13776	36.51	NaN	2855.8	30	0	1138.1	0.106				-1	 	0	58	329.2015111868768	656.3884694405536	2	329.2019958496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9759	4015	13771
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13777	36.511	NaN	2449.1	30	0	311.79	0.106				-1	CVKWMVLF	8	67	541.77880859375	NaN	0	541.77880859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_C(Carbamidomethyl (C))VKWMVLF_	CCNE1|p.P333L|1|0.25|ENSG00000105173|chr19:29822491-29822491|C/T|missense_variant	37.028477286268924	1.7418937515398478	2				NaN	NaN	0	NaN	9760	4015	13771
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13778	36.513	NaN	2712.4	30	0	443.84	0.038	+			51534	YWMHVQNTF	9	62	621.2739587235737	1240.5333645139474	2	621.275146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_YWM(Oxidation (M))HVQNTF_	ENSG00000114796|ENST00000242810|KLHL24;nc|ENSG00000114796|Q6TFL4-2|KLHL24	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	9761	4015	13771
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13788	36.537	NaN	30562	30	0	4183	0.214	+			26519	LTQALLWSV	9	88	515.8005684576353	1029.5865839820706	2	515.8005981445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LTQALLWSV_	ENST00000569193.1_1_16:46957913-46962906:+|nuORF	75.04331003522576	0.118981335847003	2				NaN	NaN	0	NaN	9768	4018	13787
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13789	36.54	NaN	6886.9	30	0	549.06	0.106	+			45577	TYNPAFSRL	9	75	534.7774258112507	1067.5402986893014	2	534.7772827148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TYNPAFSRL_	ENSG00000146433|ENST00000684151|TMEM181;nc|ENSG00000146433|Q9P2C4-1|TMEM181	49.536043120802724	0.308405419312776	2				NaN	NaN	0	NaN	9769	4018	13787
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13790	36.542	NaN	4141.2	30	0	378.66	0.106			+	7636	DKKTDLVL	8	69	466.2768026601242	930.5390523870484	2	466.2764892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DKKTDLVL_	REV__ENSG00000141161|ENST00000394570|UNC45B;REV__nc|ENSG00000141161|Q8IWX7-2|UNC45B;REV__nc|ENSG00000141161|Q8IWX7|UNC45B;REV__UNC45B|p.K276N|1|0.26|ENSG00000141161|chr17:35159394-35159394|G/T|missense_variant	64.20726635412375	0.4601301477144759	2				NaN	NaN	0	NaN	9770	4018	13787
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13791	36.544	NaN	2393.1	30	0	144.53	0.106				-1	CCCCSCSCL	9	61	384.7721861582976	NaN	0	384.7719421386719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	4 Carbamidomethyl (C)	_C(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))CSC(Carbamidomethyl (C))SCL_	ENSG00000091844|ENST00000206262|RGS17;ENSG00000147509|ENST00000297313|RGS20;nc|ENSG00000147509|O76081-2|RGS20;nc|ENSG00000147509|O76081-5|RGS20;nc|ENSG00000147509|O76081-6|RGS20	15.641811463095205	0.38404136392510424	2				NaN	NaN	0	NaN	9771	4018	13787
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13792	36.546	NaN	4745.3	30	0	254.47	0.106	+			21463	KNGKDTFYRRK	11	83	706.8911504156308	1411.7677478980615	2	706.8902587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KNGKDTFYRRK_	ENST00000583454.1_1_17:73512940-73513526:+|nuORF	32.75053402867276	0.6462648045997152	2				NaN	NaN	0	NaN	9772	4018	13787
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13793	36.547	NaN	3217.9	30	0	318.28	0.034	+			50190	WLPGDGKGL	9	63	471.7552490234375	NaN	0	471.7552490234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_WLPGDGKGL_	ENST00000551018.5_1_12:53693125-53693203:+|nuORF	24.20275056022122	0.35506675290109213	2				NaN	NaN	0	NaN	9773	4018	13787
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13801	36.567	NaN	22871	30	0	3829.3	0.214	+			1873	AILLPQPPK	9	87	488.8131162445864	975.6116795559728	2	488.81317138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AILLPQPPK_	AluSp_dup17164|chr6:42889159-42889460:+|1.1128196386926228|0.1877517114460719|2.57|474.0|18|3|anti-sense;AluSx1_dup105715|chr19:17808831-17809133:-|1.057486810986726|0.069666496377167|3.92|481.0|18|3|anti-sense;AluY_dup35561|chr6:33300685-33300983:+|1.1748435911146424|0.1243112229828391|3.24|479.0|18|3|anti-sense;AluY_dup64372|chr11:882046-882337:+|1.6672929492750446|0.3489879065155246|2.26|478.0|12|1|anti-sense;ENST00000437681.1_1_1:28835797-28835884:+|nuORF;ENST00000452360.6_1_4:942397-950358:+|nuORF;ENST00000483835.5_1_11:5685320-5686489:-|nuORF;ENST00000496007.5_1_1:1324344-1326370:-|nuORF;ENST00000518164.5_1_8:99037863-99057595:-|nuORF;ENST00000567741.1_1_1:25644693-25663698:-|nuORF;ENST00000585457.5_1_17:42259005-42264009:-|nuORF;ENST00000591166.1_1_17:42259005-42263988:-|nuORF;ENST00000608290.1_1_22:46409584-46410459:+|nuORF;nc|ENSG00000132256|Q9C035-4|TRIM5;nc|ENSG00000137090|Q9Y5R6-3|DMRT1;nc|ENSG00000204370|O14521-4|SDHD	79.45101966838831	0.09992237243120712	2				NaN	NaN	0	NaN	9778	4021	13800
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13802	36.571	NaN	21738	30	0	3529	0.106	+			19081	IYIGGQEHF	9	88	532.2643567792945	1062.514160625389	2	532.2638549804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IYIGGQEHF_	ENSG00000158125|ENST00000379416|XDH;XDH|p.Q919Rfs*10|1|0.37|ENSG00000158125|chr2:31350104-31350104|C/-|frameshift_variant	74.25504064058377	0.12238981753128622	2				NaN	NaN	0	NaN	9779	4021	13800
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13803	36.573	NaN	7599.3	30	0	1119.1	0.106	+			17624	IEIYVQKV	8	73	496.29400068633583	990.5734484394717	2	496.2945861816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IEIYVQKV_	CLTC|p.A1374*|1|0.05|ENSG00000141367|chr17:59683464-59683465|-/TA|frameshift_variant;CLTCL1|p.H915Ifs*56|1|0.35|ENSG00000070371|chr22:19221430-19221430|G/-|frameshift_variant;ENSG00000070371|ENST00000427926|CLTCL1;ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000070371|P53675-2|CLTCL1;nc|ENSG00000141367|Q00610-2|CLTC	113.41158876095287	0.24327961457765637	2				NaN	NaN	0	NaN	9780	4021	13800
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13804	36.574	NaN	5941.1	30	0	777.44	0.106	+			46186	VDWLTEKM	8	75	519.2521691382593	1036.4897853433185	2	519.25244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_VDWLTEKM(Oxidation (M))_	ENSG00000141543|ENST00000649764|EIF4A3;ENSG00000156976|ENST00000323963|EIF4A2;ENSG00000161960|ENST00000293831|EIF4A1;ENST00000429589.5_1_3:186502413-186505273:+|nuORF;ENST00000468362.5_1_3:186503755-186505556:+|nuORF;ENST00000475653.5_1_3:186502413-186505086:+|nuORF;ENST00000492144.5_1_3:186503809-186505672:+|nuORF;ENST00000497177.1_1_3:186504924-186505672:+|nuORF;ENST00000575978.1_1_17:78111144-78112096:-|nuORF;ENST00000578324.5_1_17:7477602-7481249:+|nuORF;ENST00000581544.5_1_17:7477924-7481249:+|nuORF;ENST00000581621.1_1_17:7476159-7481249:+|nuORF;nc|ENSG00000156976|Q14240-2|EIF4A2;nc|ENSG00000161960|P60842-2|EIF4A1	107.00750918261382	0.24681273948614665	2				NaN	NaN	0	NaN	9781	4021	13800
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13805	36.576	NaN	3595	30	0	418.2	0.106	+			6945	CPHCQQAI	8	56	450.19732116197116	898.3800893907423	2	450.19732666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_CPHCQQAI_	ENSG00000089486|ENST00000567695|CDIP1;nc|ENSG00000089486|Q9H305-2|CDIP1;nc|ENSG00000089486|Q9H305-3|CDIP1	28.2542754592877	0.7411748056684583	2				NaN	NaN	0	NaN	9782	4021	13800
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13806	36.578	NaN	3828.6	30	0	390.21	0.106			+	33878	RRNRRRPNVM	10	69	677.8883500315659	NaN	0	677.8882446289062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RRNRRRPNVM_	REV__ENST00000256190.12_1_11:9801914-9801968:-|nuORF	36.31764250033197	0.3809266711384728	2				NaN	NaN	0	NaN	9783	4021	13800
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13807	36.58	NaN	2981.2	30	0	382.55	0.037			+	-1	LSSALWFCF	9	73	565.7721040329184	NaN	0	565.7734985351562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_LSSALWFC(Carbamidomethyl (C))F_	REV__ENST00000449934.6_1_6:31371392-31378514:+|nuORF	33.51558372728122	0.30835390848773375	2				NaN	NaN	0	NaN	9784	4021	13800
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13817	36.602	NaN	17617	30	0	1641	0.214	+			45540	TYKVISNEF	9	77	550.784780603209	1099.555008273218	2	550.78515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TYKVISNEF_	ENSG00000114062|ENST00000648336|UBE3A;ENST00000429033.1_1_21:32434669-32435362:-|nuORF;nc|ENSG00000114062|Q05086-2|UBE3A;nc|ENSG00000114062|Q05086|UBE3A	131.115847015877	0.014647977962315902	2				NaN	NaN	0	NaN	9791	4024	13816
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13818	36.605	NaN	7110.4	30	0	1356.4	0.106				-1	 	0	76	336.5340881535948	1006.5804350609844	3	336.5342102050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9792	4024	13816
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13819	36.607	NaN	4419.7	30	0	521.18	0.106			+	14266	GSTVLSLLGAP	11	70	507.79476404058227	1013.5749751479646	2	507.7947998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GSTVLSLLGAP_	REV__SLC39A4|p.L32V|1|0.09|ENSG00000147804|chr8:144416696-144416696|G/C|missense_variant	45.97224482568171	0.4762245054624163	2				NaN	NaN	0	NaN	9793	4024	13816
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13820	36.609	NaN	9529.5	30	0	1255.1	0.106			+	3216	ASLAAAAKVI	10	78	457.7872402013941	913.5599274695883	2	457.7869873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASLAAAAKVI_	REV__ENST00000358461.6_1_4:7873788-7941597:-|nuORF	74.25504064058377	0.24255678544297835	2				NaN	NaN	0	NaN	9794	4024	13816
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13821	36.611	NaN	4153.6	30	0	404.86	0.106	+			23235	KYIDQKFVL	9	70	577.3348774500934	1152.6552019669866	2	577.33447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KYIDQKFVL_	ENSG00000078304|ENST00000694906|PPP2R5C;ENSG00000112640|ENST00000485511|PPP2R5D;ENSG00000154001|ENST00000337537|PPP2R5E;ENST00000467447.1_1_6:42974755-42975804:+|nuORF;ENST00000495716.1_1_3:52407964-52408519:+|nuORF;nc|ENSG00000078304|Q13362-2|PPP2R5C;nc|ENSG00000078304|Q13362-3|PPP2R5C;nc|ENSG00000078304|Q13362-4|PPP2R5C;nc|ENSG00000078304|Q13362-5|PPP2R5C;nc|ENSG00000078304|Q13362|PPP2R5C;nc|ENSG00000112640|Q14738-2|PPP2R5D;nc|ENSG00000112640|Q14738-3|PPP2R5D;nc|ENSG00000154001|Q16537-2|PPP2R5E;nc|ENSG00000154001|Q16537-3|PPP2R5E;PPP2R5C|p.H504Qfs*14|1|0.07|ENSG00000078304|chr14:101925207-101925208|-/A|frameshift_variant;PPP2R5E|p.K449Nfs*7|1|0.22|ENSG00000154001|chr14:63376066-63376066|T/-|frameshift_variant;PPP2R5E|p.T201Qfs*26|1|0.36|ENSG00000154001|chr14:63396665-63396665|T/-|frameshift_variant	88.17693792209575	0.07000514020414955	2				NaN	NaN	0	NaN	9795	4024	13816
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13822	36.613	NaN	1655.1	30	0	169.75	0.033	+			21025	KKKAGPGSL	9	53	443.2788491186643	NaN	0	443.27899169921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KKKAGPGSL_	ENSG00000160208|ENST00000340648|RRP1B;nc|ENSG00000160208|Q14684-2|RRP1B	45.9519527083369	0.2345902329052062	2				NaN	NaN	0	NaN	9796	4024	13816
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13823	36.613	NaN	2857.5	30	0	435.23	0.14			+	-1	NMVTKARAM	9	70	527.2616405773092	NaN	0	527.26123046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Oxidation (M)	_NM(Oxidation (M))VTKARAM(Oxidation (M))_	REV__ENSG00000130816|ENST00000359526|DNMT1;REV__nc|ENSG00000130816|P26358-3|DNMT1;REV__nc|ENSG00000130816|P26358|DNMT1	44.116797842482775	0.2472372736944149	2				NaN	NaN	0	NaN	9797	4024	13816
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13834	36.641	NaN	10643	30	0	1489.1	0.214	+			28132	NAIVIHEVY	9	75	529.2875962341819	1056.5606395351638	2	529.2877197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAIVIHEVY_	ENSG00000132849|ENST00000642238|PATJ;ENST00000484562.5_1_1:62228564-62579919:+|nuORF;nc|ENSG00000132849|Q8NI35-2|PATJ;nc|ENSG00000132849|Q8NI35-3|PATJ;nc|ENSG00000132849|Q8NI35-5|PATJ;nc|ENSG00000132849|Q8NI35|PATJ	93.19546047674547	0.05585629608842056	2				NaN	NaN	0	NaN	9805	4027	13833
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13835	36.644	NaN	7028.6	30	0	810.67	0.106			+	47391	VPKNNGYTIE	10	70	567.7934603871474	1133.5723678410948	2	567.7935791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VPKNNGYTIE_	REV__ENSG00000100312|ENST00000216139|ACR	45.97224482568171	0.49411383603842696	2				NaN	NaN	0	NaN	9806	4027	13833
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13836	36.646	NaN	4853	30	0	536.01	0.106	+			25331	LPDLNHSQVY	10	75	593.2986728315028	1184.5827927298055	2	593.2988891601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LPDLNHSQVY_	ENSG00000005007|ENST00000262803|UPF1;ENST00000594243.1_1_19:18965730-18966052:+|nuORF;nc|ENSG00000005007|Q92900|UPF1	58.2462437865262	0.38179041844353556	2				NaN	NaN	0	NaN	9807	4027	13833
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13837	36.648	NaN	3935.9	30	0	714.61	0.106			+	34125	RSSQPPAIL	9	63	484.7797848282527	967.5450167233054	2	484.7797546386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RSSQPPAIL_	REV__ENSG00000020256|ENST00000216923|ZFP64;REV__nc|ENSG00000020256|Q9NTW7-4|ZFP64;REV__nc|ENSG00000020256|Q9NTW7-6|ZFP64;REV__ZFP64|p.D633Lfs*3|1|0.04|ENSG00000020256|chr20:52152295-52152296|-/ATTCAAG|frameshift_variant	39.252832667884924	0.4290233611298554	2				NaN	NaN	0	NaN	9808	4027	13833
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13838	36.65	NaN	4797.9	30	0	564.71	0.106			+	-1	YESRIKQM	8	72	535.7665962930156	1069.518639652831	2	535.7662963867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_YESRIKQM(Oxidation (M))_	REV__DNAH12|p.H2653Sfs*22|1|0.24|ENSG00000174844|chr3:57314595-57314596|-/A|frameshift_variant;REV__ENSG00000174844|ENST00000495027|DNAH12	42.396135135203025	0.6414440140393314	2				NaN	NaN	0	NaN	9809	4027	13833
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13839	36.652	NaN	2917.1	30	0	335.75	0.106	+			5541	AVALINAAIQK	11	68	556.3463164440551	NaN	0	556.346435546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AVALINAAIQK_	ENSG00000140575|ENST00000268182|IQGAP1;IQGAP1|p.N941Ifs*8|1|0.43|ENSG00000140575|chr15:90476693-90476693|A/-|frameshift_variant;IQGAP1|p.S1529Afs*10|1|0.15|ENSG00000140575|chr15:90492665-90492665|A/-|frameshift_variant	62.107414245175825	0.21260773887611228	2				NaN	NaN	0	NaN	9810	4027	13833
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13840	36.654	NaN	2881	30	0	238.05	0.037			+	11657	FQLSLDKCW	9	65	570.2813110351562	NaN	0	570.2813110351562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FQLSLDKCW_	REV__HERV1_I-int_dup2|chr3:34679996-34686397:+|1.0948245018220069|0.0565463038051543|4.28|448.0|282|2|anti-sense	24.20275056022122	0.35506675290109213	2				NaN	NaN	0	NaN	9811	4027	13833
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13852	36.679	NaN	10726	30	0	930	0.214	+			45811	VAIIARTDL	9	72	486.29789231852993	970.5812317038599	2	486.2975158691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VAIIARTDL_	ENSG00000106348|ENST00000338791|IMPDH1;ENSG00000178035|ENST00000326739|IMPDH2;ENST00000469328.5_1_7:128033063-128040541:-|nuORF;ENST00000484496.5_1_7:128032984-128040541:-|nuORF;IMPDH1|p.A247Gfs*7|1|0.06|ENSG00000106348|chr7:128398490-128398491|-/C|frameshift_variant;nc|ENSG00000106348|P20839-2|IMPDH1;nc|ENSG00000106348|P20839-3|IMPDH1;nc|ENSG00000106348|P20839-4|IMPDH1;nc|ENSG00000106348|P20839-5|IMPDH1;nc|ENSG00000106348|P20839-7|IMPDH1;nc|ENSG00000106348|P20839|IMPDH1	90.60085204095205	0.06317133949006545	2				NaN	NaN	0	NaN	9820	4030	13851
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13853	36.683	NaN	9466.8	30	0	1486.2	0.106	+			1144	AEMELQAKL	9	80	516.7731709167304	1031.5317889002606	2	516.7731323242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEMELQAKL_	ENSG00000177426|ENST00000343820|TGIF1;nc|ENSG00000177426|Q15583-3|TGIF1;nc|ENSG00000177426|Q15583-4|TGIF1;nc|ENSG00000177426|Q15583|TGIF1	61.691277971877994	0.19951612995419254	2				NaN	NaN	0	NaN	9821	4030	13851
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13854	36.685	NaN	5321.6	30	0	631.89	0.106	+			22216	KSVDPTLAL	9	60	472.27629437904807	NaN	0	472.2762756347656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KSVDPTLAL_	CLTC|p.A1374*|1|0.05|ENSG00000141367|chr17:59683464-59683465|-/TA|frameshift_variant;CLTC|p.D632Yfs*7|1|0.15|ENSG00000141367|chr17:59666589-59666590|-/TTACA|frameshift_variant;ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000141367|Q00610-2|CLTC	58.22992032128504	0.15686832049467786	2				NaN	NaN	0	NaN	9822	4030	13851
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13855	36.686	NaN	4214.3	30	0	658.8	0.106	+			24281	LEVVVRLPD	9	68	520.3110643722453	1038.6075758112904	2	520.3110961914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LEVVVRLPD_	ARHGAP29|p.D502V|1|0.41|ENSG00000137962|chr1:94189287-94189287|T/A|missense_variant	34.172542307311794	0.4838870758800184	2				NaN	NaN	0	NaN	9823	4030	13851
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13856	36.688	NaN	9920.1	30	0	1176.2	0.106	+			14029	GSGEFGSVFK	10	78	507.74806404284124	1013.4815751524825	2	507.7478332519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GSGEFGSVFK_	ENSG00000166483|ENST00000450114|WEE1;ENST00000524549.1_1_11:9597437-9598815:+|nuORF;nc|ENSG00000166483|P30291-2|WEE1	50.79123845855914	0.44970922346023856	2				NaN	NaN	0	NaN	9824	4030	13851
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13857	36.69	NaN	3751.4	30	0	441.79	0.106			+	23269	KYKHNNFDL	9	73	589.8024588549233	1177.5903647766465	2	589.8026123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KYKHNNFDL_	REV__tr|U7T6A2|U7T6A2_FUSNUAutotransporterdomain-containingprotein(Fragment)OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00182PE=4SV=1	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	9825	4030	13851
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13858	36.692	NaN	4001.6	30	0	516.72	0.037				-1	MVMYRWVF	8	74	582.2721411910511	1162.5297294489021	2	582.272216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Oxidation (M)	_M(Oxidation (M))VM(Oxidation (M))YRWVF_	L1PA3_dup1321|chr2:173527290-173533317:-|1.892281258594111|0.2637255971055219|2.84|482.0|352|3|anti-sense	52.29916861842294	0.578018602984656	2				NaN	NaN	0	NaN	9826	4030	13851
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13869	36.718	NaN	23849	30	0	3816.2	0.214	+			16422	HESAVTGLSL	10	69	507.2667169680719	1012.5188810029438	2	507.2669982910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HESAVTGLSL_	ENSG00000110107|ENST00000227524|PRPF19;PRPF19|p.S440Hfs*2|1|0.3|ENSG00000110107|chr11:60897945-60897945|A/-|frameshift_variant	79.71258880314673	0.19796908725841375	2				NaN	NaN	0	NaN	9834	4033	13868
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13870	36.721	NaN	5976	30	0	969.7	0.106			+	47102	VLLHDKVL	8	61	468.7977155797097	935.5808782262194	2	468.79766845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VLLHDKVL_	REV__ENST00000270861.9_1_4:128802164-128803079:+|nuORF;REV__ENST00000513090.5_1_4:128802191-128804636:+|nuORF	40.5726180659479	0.6527593143185008	2				NaN	NaN	0	NaN	9835	4033	13868
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13871	36.723	NaN	5700.4	30	0	1032.6	0.106	+			47265	VMSQALKATF	10	65	548.2965797488616	1094.5786065645232	2	548.2974853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VMSQALKATF_	ENSG00000157557|ENST00000360938|ETS2	102.0615471778698	0.07157459376830236	2				NaN	NaN	0	NaN	9836	4033	13868
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13872	36.725	NaN	6761.4	30	0	1503.3	0.106	+			25655	LQYVLDKL	8	69	496.29400068633583	990.5734484394717	2	496.7927551269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LQYVLDKL_	ENSG00000135387|ENST00000341394|CAPRIN1;nc|ENSG00000135387|Q14444-2|CAPRIN1	64.20726635412375	0.4601301477144759	2				NaN	NaN	0	NaN	9837	4033	13868
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13873	36.727	NaN	6445.5	30	0	879.68	0.106	+			19034	IYATEAHVF	9	75	525.7667791254205	1049.519005317641	2	525.766845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IYATEAHVF_	ENSG00000058804|ENST00000371429|NDC1;nc|ENSG00000058804|Q9BTX1-2|NDC1;nc|ENSG00000058804|Q9BTX1-3|NDC1;nc|ENSG00000058804|Q9BTX1-4|NDC1;nc|ENSG00000058804|Q9BTX1-5|NDC1;nc|ENSG00000058804|Q9BTX1-6|NDC1	88.64286706044652	0.06869153472052109	2				NaN	NaN	0	NaN	9838	4033	13868
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13874	36.728	NaN	5495.1	30	0	2822	0.106	+			1891	AIMDPLPLRTK	11	58	418.91302401858127	1253.717242655944	3	418.91265869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AIMDPLPLRTK_	AHR|p.D549Vfs*28|1|0.18|ENSG00000106546|chr7:17339471-17339474|ATTT/-|frameshift_variant;AHR|p.F562Sfs*16|1|0.24|ENSG00000106546|chr7:17339506-17339506|T/-|frameshift_variant;ENSG00000106546|ENST00000242057|AHR	45.908116695636124	0.4771019740774998	2				NaN	NaN	0	NaN	9839	4033	13868
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13875	36.73	NaN	4101.7	30	0	420.35	0.038			+	-1	LSSTLETSFY	10	64	595.2855030381186	1188.556453143037	2	595.28564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LSSTLETSFY_	REV__ENSG00000142182|ENST00000628202|DNMT3L;REV__nc|ENSG00000142182|Q9UJW3-2|DNMT3L	51.33545320467046	0.4446945571623749	2				NaN	NaN	0	NaN	9840	4033	13868
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13886	36.756	NaN	23660	30	0	3113.9	0.214	+			14296	GSWASLVQK	9	82	488.2666040564634	974.5186551797268	2	488.2662658691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSWASLVQK_	BRD4|p.P1210L|1|0.19|ENSG00000141867|chr19:15239212-15239212|G/A|missense_variant;ENSG00000141867|ENST00000679869|BRD4	127.46168284122857	0.016682644177004526	2				NaN	NaN	0	NaN	9848	4036	13885
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13887	36.76	NaN	15056	30	0	1940.2	0.106	+			30856	QEHLQLQNL	9	91	561.798744629931	1121.5829363266619	2	561.7988891601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QEHLQLQNL_	CLTC-CEP95|1|fusion;CLTC|p.A1374*|1|0.05|ENSG00000141367|chr17:59683464-59683465|-/TA|frameshift_variant;CLTC|p.D632Yfs*7|1|0.15|ENSG00000141367|chr17:59666589-59666590|-/TTACA|frameshift_variant;ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000141367|Q00610-2|CLTC	82.24051045832904	0.08786059719216216	2				NaN	NaN	0	NaN	9849	4036	13885
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13888	36.762	NaN	6788.3	30	0	1059.7	0.106	+			23212	KYGALVNNF	9	69	513.2743455333198	1024.5341381334395	2	513.274658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KYGALVNNF_	ENSG00000117481|ENST00000474844|NSUN4;ENST00000475281.1_1_1:46810505-46810817:+|nuORF;ENST00000495427.1_2_1:46810505-46812688:+|nuORF;nc|ENSG00000117481|Q96CB9-2|NSUN4;nc|ENSG00000117481|Q96CB9-4|NSUN4	116.90359126533652	0.02307425081617795	2				NaN	NaN	0	NaN	9850	4036	13885
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13889	36.763	NaN	5036.3	30	0	566.97	0.106	+			21210	KLFHGSLEEL	10	74	586.8194224750898	1171.6242920169796	2	586.81982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KLFHGSLEEL_	ARHGAP9|p.H688Pfs*20|1|0.35|ENSG00000123329|chr12:57472650-57472651|-/G|frameshift_variant;ENSG00000123329|ENST00000393791|ARHGAP9;ENST00000552420.5_1_12:57870791-57873587:-|nuORF;nc|ENSG00000123329|Q9BRR9-5|ARHGAP9;nc|ENSG00000123329|Q9BRR9|ARHGAP9	41.080066990542036	0.5391928043837881	2				NaN	NaN	0	NaN	9851	4036	13885
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13890	36.765	NaN	5008.5	30	0	501.69	0.106	+			35728	SDLTGSFRLY	10	66	579.7935822608779	1157.5726115885557	2	579.7933959960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SDLTGSFRLY_	ENSG00000000419|ENST00000371588|DPM1;ENST00000466152.5_1_20:49551671-49557490:-|nuORF	40.77816245573522	0.5419747034533848	2				NaN	NaN	0	NaN	9852	4036	13885
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13891	36.767	NaN	15785	30	0	1147	0.106	+			40818	SVEEISTLVQK	11	86	616.840587348632	1231.6666217640638	2	616.84033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVEEISTLVQK_	ENSG00000055950|ENST00000318364|MRPL43;nc|ENSG00000055950|Q8N983-2|MRPL43;nc|ENSG00000055950|Q8N983-3|MRPL43;nc|ENSG00000055950|Q8N983-6|MRPL43;nc|ENSG00000055950|Q8N983-7|MRPL43;nc|ENSG00000055950|Q8N983|MRPL43	162.63603312974413	4.7853989453775665E-05	2				NaN	NaN	0	NaN	9853	4036	13885
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13892	36.769	NaN	5914.9	30	0	911.48	0.036	+			10916	FDISFIPQL	9	70	540.294441435135	1078.57432993707	2	540.79296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FDISFIPQL_	ABCA9|p.G872D|1|0.31|ENSG00000154258|chr17:69018565-69018565|C/T|missense_variant	56.72105179125745	0.24094814563026265	2				NaN	NaN	0	NaN	9854	4036	13885
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13901	36.789	NaN	28462	30	0	4030.1	0.214	+			34764	RYGLVTNEI	9	78	532.7904313729232	NaN	0	532.79052734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RYGLVTNEI_	ENSG00000115267|ENST00000649979|IFIH1;IFIH1|p.E827Dfs*5|1|0.04|ENSG00000115267|chr2:162272361-162272362|-/ATAAGGTATTG|frameshift_variant	109.47833844074708	0.010168233843482827	2				NaN	NaN	0	NaN	9860	4039	13900
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13902	36.792	NaN	19417	30	0	3053.1	0.106	+			1034	AEKLITQTF	9	86	525.7953515298784	1049.5761501265567	2	525.7952880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEKLITQTF_	ENSG00000090273|ENST00000321265|NUDC	136.98908636845044	0.011892605960677736	2				NaN	NaN	0	NaN	9861	4039	13900
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13903	36.794	NaN	5951.7	30	0	741	0.106				-1	DGVSLMRVL	9	78	503.273504083646	1004.532455234092	2	503.2736511230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_DGVSLM(Oxidation (M))RVL_	ENSG00000181222|ENST00000674977|POLR2A;nc|ENSG00000181222|P24928|POLR2A	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	9862	4039	13900
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13904	36.796	NaN	4759.4	30	0	1345.5	0.106				-1	 	0	59	368.8476165477746	1103.5210202435237	3	368.8477783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9863	4039	13900
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13905	36.798	NaN	9587.4	30	0	1596.5	0.106	+			16501	HETTFNSIM	9	70	540.2448483918919	1078.4751438505837	2	540.2450561523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HETTFNSIM_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196604|ENST00000409914|POTEF;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000418351.1_1_15:44281261-44281585:-|nuORF;ENST00000437653.1_1_3:175695464-175695797:-|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000486001.1_1_1:27651822-27652284:+|nuORF;ENST00000493945.5_1_7:5567381-5567853:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF	62.107414245175825	0.1960472003779324	2				NaN	NaN	0	NaN	9864	4039	13900
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13906	36.8	NaN	2398.1	30	0	265.81	0.106			+	46774	VGVQDHLL	8	59	440.74779834818906	NaN	0	440.74774169921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VGVQDHLL_	REV__ENSG00000122218|ENST00000241704|COPA;REV__nc|ENSG00000122218|P53621-2|COPA	38.80614096846853	1.7418937515398478	2				NaN	NaN	0	NaN	9865	4039	13900
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13907	36.801	NaN	3563.8	30	0	318.53	0.036	+			45667	TYVTEVREL	9	69	555.2956324163329	1108.5767118994656	2	555.2958374023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TYVTEVREL_	ENSG00000126777|ENST00000395314|KTN1;nc|ENSG00000126777|Q86UP2-2|KTN1;nc|ENSG00000126777|Q86UP2-3|KTN1;nc|ENSG00000126777|Q86UP2-4|KTN1	49.536043120802724	0.308405419312776	2				NaN	NaN	0	NaN	9866	4039	13900
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13921	36.83	NaN	10432	30	0	1568.2	0.215	+			38613	SSGRCYYY	8	86	499.70599921540366	997.3974454976074	2	499.70599365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSGRCYYY_	ENSG00000165322|ENST00000344936|ARHGAP12;nc|ENSG00000165322|Q8IWW6-2|ARHGAP12;nc|ENSG00000165322|Q8IWW6-3|ARHGAP12;nc|ENSG00000165322|Q8IWW6-4|ARHGAP12	47.91560031466742	0.6071945918984287	2				NaN	NaN	0	NaN	9877	4042	13920
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13922	36.834	NaN	4868.9	30	0	597.42	0.106			+	-1	NMTNSPGLPF	10	70	547.2525691910819	1092.4905854489637	2	547.2527465820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_NM(Oxidation (M))TNSPGLPF_	REV__ENST00000298159.10_1_14:35181868-35181994:-|nuORF	36.446750945000026	0.5818864909973037	2				NaN	NaN	0	NaN	9878	4042	13920
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13923	36.836	NaN	3140.6	30	0	262.74	0.106				-1	CLSPAVIVGLL	11	60	381.22749321549	1140.66065024667	3	381.2276916503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_C(Carbamidomethyl (C))LSPAVIVGLL_	ENSG00000092621|ENST00000641023|PHGDH;ENST00000482968.1_1_1:120282927-120286660:+|nuORF	31.634271133179894	0.6579734920221648	2				NaN	NaN	0	NaN	9879	4042	13920
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13924	36.838	NaN	4839.4	30	0	742.14	0.106			+	-1	QLCCEPDMC	9	53	391.1344818344057	NaN	0	391.1810607910156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C),Oxidation (M)	_QLC(Carbamidomethyl (C))CEPDM(Oxidation (M))C(Carbamidomethyl (C))_	REV__TENM4|p.D856E|1|0.07|ENSG00000149256|chr11:78756993-78756993|G/C|missense_variant	14.137123925751023	0.3891339986947948	2				NaN	NaN	0	NaN	9880	4042	13920
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13925	36.84	NaN	3562.6	30	0	392.1	0.106			+	50952	YIEDPVQPI	9	66	537.2794583454915	NaN	0	537.2801513671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YIEDPVQPI_	REV__ENSG00000133246|ENST00000423345|PRAM1	42.396135135203025	0.2590952873412954	2				NaN	NaN	0	NaN	9881	4042	13920
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13926	36.841	NaN	3662.7	30	0	705.07	0.037				-1	SMVWANHLF	9	66	374.17967441869223	1119.5171938562767	3	374.17962646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_SM(Oxidation (M))VWANHLF_	ENSG00000237190|ENST00000458198|CDKN2AIPNL;nc|ENSG00000237190|Q96HQ2-2|CDKN2AIPNL	25.57405402267927	0.5642445186134241	2				NaN	NaN	0	NaN	9882	4042	13920
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13927	36.842	NaN	2311.3	30	0	273.87	0.138			+	26632	LVATSGIKL	9	60	451.28965278924704	900.5647526452941	2	451.2893981933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LVATSGIKL_	REV__ENSG00000176087|ENST00000323146|SLC35A4	51.33545320467046	0.2872990594074956	2				NaN	NaN	0	NaN	9883	4042	13920
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13938	36.869	NaN	68123	30	0	50306	0.214	+			35382	SAPYGRITL	9	86	489.2742883263494	976.5340237194988	2	489.2741394042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAPYGRITL_	ENSG00000055163|ENST00000620254|CYFIP2;ENSG00000273749|ENST00000617928|CYFIP1;KBTBD2-CYFIP1|1|fusion;nc|ENSG00000055163|Q96F07|CYFIP2;nc|ENSG00000273749|Q7L576-2|CYFIP1;nc|ENSG00000273749|Q7L576-3|CYFIP1	51.52775601994872	0.28504342437107444	2				NaN	NaN	0	NaN	9891	4045	13937
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13939	36.873	NaN	15409	30	0	4811.5	0.106	+			34776	RYIPTAAAF	9	68	505.27752929734413	1008.5405056614883	2	505.27679443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RYIPTAAAF_	ENSG00000058262|ENST00000243253|SEC61A1;ENSG00000065665|ENST00000298428|SEC61A2;ENST00000498837.1_1_3:127786720-127788502:+|nuORF;nc|ENSG00000058262|P61619-3|SEC61A1;nc|ENSG00000065665|Q9H9S3-3|SEC61A2	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	9892	4045	13937
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13940	36.875	NaN	4391.6	30	0	412.1	0.106	+			17342	IAISRTPVL	9	62	485.3082244179809	968.6018959027618	2	485.3082580566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IAISRTPVL_	ENSG00000165678|ENST00000372134|GHITM	90.60085204095205	0.06317133949006545	2				NaN	NaN	0	NaN	9893	4045	13937
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13941	36.876	NaN	5064.9	30	0	528.06	0.106	+			19066	IYGVFDEKK	9	69	549.7948556470988	1097.5751583609974	2	549.7952880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IYGVFDEKK_	ENSG00000150712|ENST00000382142|MTMR12;nc|ENSG00000150712|Q9C0I1-2|MTMR12;nc|ENSG00000150712|Q9C0I1-3|MTMR12	62.107414245175825	0.1960472003779324	2				NaN	NaN	0	NaN	9894	4045	13937
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13942	36.878	NaN	10581	30	0	1303.5	0.106	+			45533	TYITSVSRL	9	72	520.2926779693978	1038.5708030055955	2	520.292724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TYITSVSRL_	ENSG00000164823|ENST00000451899|OSGIN2;nc|ENSG00000164823|Q9Y236|OSGIN2	96.0336014099291	0.047854655524928534	2				NaN	NaN	0	NaN	9895	4045	13937
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13943	36.88	NaN	4858.4	30	0	591.89	0.106			+	25225	LMVSNAMRFM	10	68	608.2880929881229	1214.5616330430457	2	608.2874755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_LMVSNAMRFM(Oxidation (M))_	REV__ENST00000506123.5_1_5:54461320-54461404:+|nuORF	47.657333605630114	0.47858658696240314	2				NaN	NaN	0	NaN	9896	4045	13937
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13944	36.882	NaN	2609.8	30	0	244.09	0.034	+			27619	MPPSLPTSV	9	60	464.74194678398453	NaN	0	464.7421569824219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MPPSLPTSV_	ENSG00000119596|ENST00000325680|YLPM1;YLPM1|p.F1761Lfs*40|1|0.31|ENSG00000119596|chr14:74811671-74811671|T/-|frameshift_variant;YLPM1|p.P816Qfs*13|1|0.4|ENSG00000119596|chr14:74797738-74797738|G/-|frameshift_variant	65.80317337860623	0.12456833308499304	2				NaN	NaN	0	NaN	9897	4045	13937
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13955	36.907	NaN	4700	30	0	991.64	0.214	+			29928	PLVGSHPL	8	55	410.2401195614475	818.465686189695	2	410.23974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PLVGSHPL_	ENST00000595091.6_2_19:53854892-53855471:+|nuORF	37.028477286268924	0.6747514403204248	2				NaN	NaN	0	NaN	9905	4048	13954
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13956	36.91	NaN	7020.6	30	0	756.14	0.106	+			42122	SYLNSVQRL	9	80	540.294441435135	1078.57432993707	2	540.296142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SYLNSVQRL_	ENSG00000136243|ENST00000258742|NUP42;nc|ENSG00000136243|O15504-2|NUP42	82.7504851949679	0.08565546331141553	2				NaN	NaN	0	NaN	9906	4048	13954
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13957	36.912	NaN	4846	30	0	355.87	0.106				-1	HSEMAELSL	9	71	516.736697805928	1031.4588426786559	2	516.7366943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_HSEM(Oxidation (M))AELSL_	ENSG00000080200|ENST00000389622|CRYBG3	44.116797842482775	0.37197099687881774	2				NaN	NaN	0	NaN	9907	4048	13954
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13958	36.914	NaN	3185.5	30	0	364.89	0.106	+			4886	ATQDILKALSK	11	74	594.3533442728838	1186.6921356125674	2	594.3535766601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATQDILKALSK_	ENSG00000085276|ENST00000651503|MECOM;MECOM|p.G611Efs*33|1|0.39|ENSG00000085276|chr3:169115476-169115476|C/-|frameshift_variant;MECOM|p.G614Efs*30|5|0.4|ENSG00000085276|chr3:169115469-169115469|T/-|frameshift_variant;MECOM|p.P513Qfs*15|2|0.39|ENSG00000085276|chr3:169115772-169115772|A/-|frameshift_variant;MECOM|p.S389Rfs*46|1|0.33|ENSG00000085276|chr3:169116140-169116143|CTGA/-|frameshift_variant;MECOM|p.V498Sfs*27|1|0.34|ENSG00000085276|chr3:169115816-169115817|-/T|frameshift_variant;nc|ENSG00000085276|Q03112-1|MECOM;nc|ENSG00000085276|Q03112-4|MECOM;nc|ENSG00000085276|Q03112-5|MECOM;nc|ENSG00000085276|Q03112-6|MECOM;nc|ENSG00000085276|Q03112-8|MECOM;nc|ENSG00000085276|Q03112|MECOM	67.74936324283564	0.2545025576448278	2				NaN	NaN	0	NaN	9908	4048	13954
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13959	36.916	NaN	1984.7	30	0	355.89	0.106			+	7130	DAASHIPTL	9	59	462.74260632546185	NaN	0	462.7424621582031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DAASHIPTL_	REV__ASB15|p.S307R|1|0.07|ENSG00000146809|chr7:123628915-123628915|T/A|missense_variant;REV__ASB15|p.W524Lfs*15|1|0.12|ENSG00000146809|chr7:123630095-123630096|-/TGATAAAATTTAATTTAGTA|frameshift_variant;REV__ENSG00000146809|ENST00000451215|ASB15	27.882242232435846	0.3367954786602879	2				NaN	NaN	0	NaN	9909	4048	13954
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13960	36.918	NaN	2799.7	30	0	433.45	0.106	+			36928	SIKSTKMLIHP	11	66	627.8649834940607	1253.7154140549212	2	627.8652954101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SIKSTKMLIHP_	ENSG00000132855|ENST00000371129|ANGPTL3	28.5767321226876	0.690044582712672	2				NaN	NaN	0	NaN	9910	4048	13954
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13961	36.92	NaN	3973.1	30	0	288.77	0.041	+			26890	LWRSRVVPDRE	11	67	706.8911504156308	1411.7677478980615	2	707.391357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LWRSRVVPDRE_	ENSG00000137834|ENST00000288840|SMAD6;nc|ENSG00000137834|O43541-4|SMAD6	20.83715455343099	0.7712264395190968	2				NaN	NaN	0	NaN	9911	4048	13954
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13972	36.945	NaN	5595.3	30	0	1357.6	0.214				-1	 	0	59	336.5340881535948	1006.5804350609844	3	336.53424072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9919	4051	13971
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13973	36.949	NaN	7015	30	0	860.66	0.106	+			13284	GIYAYGFEK	9	73	524.2612171886373	1046.5078814440744	2	524.2611083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GIYAYGFEK_	EIF4A2|p.Q209Lfs*23|1|0.03|ENSG00000156976|chr3:186786269-186786270|-/ACTGTCATTTCTAGATCTAC|frameshift_variant;ENSG00000141543|ENST00000649764|EIF4A3;ENSG00000156976|ENST00000323963|EIF4A2;ENSG00000161960|ENST00000293831|EIF4A1;ENST00000465032.5_1_3:186501384-186502902:+|nuORF;ENST00000465222.1_1_3:186502277-186502505:+|nuORF;ENST00000465267.5_1_3:186501384-186502902:+|nuORF;ENST00000467585.1_1_3:186502182-186503751:+|nuORF;ENST00000485101.5_1_3:186501384-186502505:+|nuORF;ENST00000486805.5_1_3:186501384-186502505:+|nuORF;ENST00000575957.1_1_17:78115565-78120760:-|nuORF;ENST00000578324.5_1_17:7477602-7481249:+|nuORF;ENST00000580461.5_1_17:7476163-7478717:+|nuORF;ENST00000581621.1_1_17:7476159-7481249:+|nuORF;ENST00000582848.5_1_17:7476159-7480015:+|nuORF;ENST00000584054.5_1_17:7476159-7478064:+|nuORF;ENST00000584712.5_1_17:7476159-7478717:+|nuORF;ENST00000584901.5_1_17:7476159-7480015:+|nuORF;nc|ENSG00000156976|Q14240-2|EIF4A2;nc|ENSG00000161960|P60842-2|EIF4A1	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	9920	4051	13971
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13974	36.951	NaN	3736.8	30	0	432.12	0.106	+			42143	SYPNWLKF	8	68	527.7710534179914	1053.5275539027828	2	528.2725830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SYPNWLKF_	ENSG00000177706|ENST00000313766|FAM20C	45.9519527083369	0.6193794311207887	2				NaN	NaN	0	NaN	9921	4051	13971
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13975	36.953	NaN	2487.8	30	0	196.59	0.106			+	24307	LFGLRDYEV	9	75	556.2923985206105	NaN	0	556.2918701171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LFGLRDYEV_	REV__ENST00000479383.5_1_1:44267185-44297359:+|nuORF	42.396135135203025	0.2590952873412954	2				NaN	NaN	0	NaN	9922	4051	13971
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13976	36.954	NaN	1635.1	30	0	202.82	0.106			+	-1	GSGCCCCCLCS	11	53	384.7721861582976	NaN	0	384.7726135253906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C)	_GSGC(Carbamidomethyl (C))CCCCLC(Carbamidomethyl (C))S_	REV__CD2AP-MDFI|1|fusion;REV__ENSG00000112559|ENST00000230321|MDFI	12.95748067046073	0.456735970842152	2				NaN	NaN	0	NaN	9923	4051	13971
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13977	36.956	NaN	3171.9	30	0	198.51	0.106	+			16963	HPQPAPCMLL	10	73	553.7770102800151	1105.5394676268302	2	553.775146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HPQPAPCMLL_	ENST00000378017.7_1_8:125564308-125564464:-|nuORF	47.91560031466742	0.4762067885998563	2				NaN	NaN	0	NaN	9924	4051	13971
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13978	36.958	NaN	3652.3	30	0	406.74	0.037			+	50260	WQGQYLIWA	9	65	582.7975135514606	1163.5804741697211	2	582.7974853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_WQGQYLIWA_	REV__INPPL1|p.P976Hfs*155|1|0.31|ENSG00000165458|chr11:72237165-72237165|C/-|frameshift_variant	31.954861631926434	0.5046124803899898	2				NaN	NaN	0	NaN	9925	4051	13971
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13987	36.98	NaN	2439.2	30	0	292.27	0.214	+			45602	TYPDVNNSI	9	65	511.7433211593907	1021.4720893855814	2	511.74359130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TYPDVNNSI_	ENSG00000122958|ENST00000263559|VPS26A;nc|ENSG00000122958|O75436-2|VPS26A	47.95952297671804	0.32689736945648856	2				NaN	NaN	0	NaN	9931	4054	13986
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13988	36.983	NaN	3423.4	30	0	429.67	0.106	+			30089	PQSIQRDII	9	69	535.3040492235606	1068.593545513921	2	535.2753295898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PQSIQRDII_	ENSG00000138670|ENST00000264400|RASGEF1B;nc|ENSG00000138670|Q0VAM2-2|RASGEF1B;nc|ENSG00000138670|Q0VAM2-3|RASGEF1B;RASGEF1B|p.T323Lfs*5|1|0.3|ENSG00000138670|chr4:81442338-81442338|T/-|frameshift_variant	31.529811441608018	0.5085848003137583	2				NaN	NaN	0	NaN	9932	4054	13986
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13989	36.985	NaN	3148.6	30	0	256.68	0.106			+	-1	RTTMYEARH	9	64	590.7789250604951	1179.5432971877901	2	590.778564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_RTTM(Oxidation (M))YEARH_	REV__ENSG00000196935|ENST00000355086|SRGAP1;REV__SRGAP1|p.F541Sfs*40|1|0.09|ENSG00000196935|chr12:64095145-64095145|T/-|frameshift_variant;REV__SRGAP1|p.P856Lfs*3|1|0.56|ENSG00000196935|chr12:64127883-64127883|C/-|frameshift_variant	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	9933	4054	13986
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13990	36.987	NaN	2858.5	30	0	371.44	0.106			+	21576	KPFSYPNDN	9	60	541.2519304274842	1080.4893079217684	2	541.2518310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KPFSYPNDN_	REV__ENSG00000136542|ENST00000259056|GALNT5	34.172542307311794	0.4838870758800184	2				NaN	NaN	0	NaN	9934	4054	13986
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13991	36.989	NaN	2928.5	30	0	464.19	0.038				-1	 	0	74	613.7616557374791	1225.5087585417582	2	613.7613525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9935	4054	13986
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	13999	37.009	NaN	9947	30	0	1993.2	0.214	+			1951	AIVAYGLYK	9	73	499.2896174025031	996.5646818718062	2	499.2894592285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AIVAYGLYK_	ENSG00000181061|ENST00000321331|HIGD1A;ENST00000470543.1_1_3:42826765-42845976:-|nuORF;nc|ENSG00000181061|Q9Y241-2|HIGD1A	76.84663266511073	0.11118375776443899	2				NaN	NaN	0	NaN	9940	4057	13998
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14000	37.012	NaN	5208.9	30	0	934.85	0.106	+			46496	VETVYTHVL	9	69	530.7876186109129	1059.5606842886257	2	530.78759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VETVYTHVL_	ENSG00000163902|ENST00000296255|RPN1	99.37495909608758	0.03983967222258828	2				NaN	NaN	0	NaN	9941	4057	13998
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14001	37.014	NaN	5519.3	30	0	636.37	0.106				-1	GTMDMSITRL	10	67	570.7735988079274	1139.5326446826548	2	570.7739868164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_GTM(Oxidation (M))DMSITRL_	ENSG00000153107|ENST00000341068|ANAPC1;ENST00000454465.1_1_2:87355723-87398314:+|nuORF;ENST00000485325.1_1_2:112560984-112579093:-|nuORF	53.59686742100583	0.4240759338601513	2				NaN	NaN	0	NaN	9942	4057	13998
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14002	37.016	NaN	5117	30	0	438.5	0.106	+			23346	KYTKIFNDF	9	69	588.3085869908269	1174.6026210484538	2	588.308349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KYTKIFNDF_	ENSG00000015171|ENST00000381604|ZMYND11;nc|ENSG00000015171|Q15326-2|ZMYND11;nc|ENSG00000015171|Q15326-3|ZMYND11;nc|ENSG00000015171|Q15326-4|ZMYND11;nc|ENSG00000015171|Q15326-5|ZMYND11;nc|ENSG00000015171|Q15326-6|ZMYND11;ZMYND11|p.L498Afs*3|1|0.3|ENSG00000015171|chr10:248592-248602|GAGAAGCTCTG/-|frameshift_variant	63.69406221917213	0.18282083575345315	2				NaN	NaN	0	NaN	9943	4057	13998
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14003	37.018	NaN	2988.7	30	0	504.71	0.106				-1	 	0	50	329.201313348765	656.38807376433	2	329.2013854980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9944	4057	13998
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14004	37.019	NaN	4943	30	0	430.75	0.106	+			12933	GESQTLQQF	9	73	519.2488018735805	1036.483050813961	2	519.2489013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GESQTLQQF_	ENSG00000197694|ENST00000372739|SPTAN1;nc|ENSG00000197694|Q13813-3|SPTAN1;nc|ENSG00000197694|Q13813|SPTAN1	115.49404669440601	0.023927554121326553	2				NaN	NaN	0	NaN	9945	4057	13998
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14005	37.021	NaN	5066.9	30	0	1119.3	0.036	+			25385	LPHVINPVES	10	72	552.805762159346	1103.596971385492	2	552.8056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LPHVINPVES_	ENSG00000087111|ENST00000308360|PIGS;ENST00000484580.6_1_17:26883511-26887327:-|nuORF;nc|ENSG00000087111|Q96S52-2|PIGS	47.227680397652996	0.4825456260682108	2				NaN	NaN	0	NaN	9946	4057	13998
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14012	37.038	NaN	6282.4	30	0	1236.8	0.214			+	47080	VLIHGHNTN	9	74	502.76710332699963	1003.5196537207993	2	502.7666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VLIHGHNTN_	REV__CON__Q3ZBD7;REV__ENSG00000105220|ENST00000356487|GPI;REV__ENST00000589504.1_1_19:34856171-34859700:+|nuORF;REV__GPI|p.E382Sfs*20|1|0.52|ENSG00000105220|chr19:34396377-34396377|G/-|frameshift_variant;REV__nc|ENSG00000105220|P06744-2|GPI	54.776311868738084	0.25715957988447635	2				NaN	NaN	0	NaN	9950	4060	14011
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14013	37.041	NaN	4312.9	30	0	709.14	0.106	+			17185	HTRTIESIL	9	72	535.3040492235606	1068.593545513921	2	535.3040771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HTRTIESIL_	ENSG00000035403|ENST00000211998|VCL;ENST00000478896.2_1_10:75757878-75863603:+|nuORF;nc|ENSG00000035403|P18206-2|VCL	42.396135135203025	0.392153681582562	2				NaN	NaN	0	NaN	9951	4060	14011
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14014	37.043	NaN	3349.6	30	0	370.06	0.106	+			9359	EISQASHYF	9	62	541.2519304274842	1080.4893079217684	2	541.2517700195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EISQASHYF_	ENSG00000100385|ENST00000216223|IL2RB;IL2RB|p.P489Lfs*43|1|0.23|ENSG00000100385|chr22:37128286-37128286|G/-|frameshift_variant	53.351449002276354	0.2690372970092375	2				NaN	NaN	0	NaN	9952	4060	14011
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14015	37.045	NaN	2449.2	30	0	214.16	0.106	+			15649	GVLMIHPPGA	10	65	496.2709194782073	NaN	0	496.2699279785156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GVLMIHPPGA_	ENSG00000254585|ENST00000650528|MAGEL2;MAGEL2|p.Q666Sfs*36|2|0.5|ENSG00000254585|chr15:23645747-23645747|G/-|frameshift_variant	35.200714571348534	0.3845941098745963	2				NaN	NaN	0	NaN	9953	4060	14011
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14016	37.047	NaN	3113.2	30	0	327.2	0.106			+	28023	MYRDYSMVT	9	68	583.2532886949791	1164.4920244567581	2	583.2542114257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MYRDYSMVT_	REV__ENSG00000198452|ENST00000641545|OR14L1P;REV__ENST00000419087.1_1_1:247782982-247783861:+|nuORF	47.657333605630114	0.33044192980041115	2				NaN	NaN	0	NaN	9954	4060	14011
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14017	37.049	NaN	3093.4	30	0	400.58	0.106			+	13927	GRQSTKPSNN	10	65	544.7756727393353	1087.5367925454705	2	544.7743530273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GRQSTKPSNN_	REV__ENST00000278460.11_1_11:47183282-47183486:+|nuORF	56.43379154798735	0.3982744522255666	2				NaN	NaN	0	NaN	9955	4060	14011
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14018	37.051	NaN	1960.4	30	0	408.1	0.03				-1	 	0	48	324.16755281711147	646.320552701023	2	324.16790771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	9956	4060	14011
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14028	37.074	NaN	6649.8	30	0	545.39	0.214	+			8752	EEFTGQLKV	9	75	525.7768882257018	1049.5392235182035	2	525.7770385742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EEFTGQLKV_	ENSG00000054654|ENST00000555002|SYNE2;nc|ENSG00000054654|Q8WXH0|SYNE2;SYNE2|p.A5240Qfs*5|1|0.07|ENSG00000054654|chr14:64152639-64152639|G/-|frameshift_variant;SYNE2|p.D3074Ffs*8|1|0.07|ENSG00000054654|chr14:64053132-64053133|-/TTTCTTTTTCAAATACTTG|frameshift_variant;SYNE2|p.F2563Ifs*28|1|0.34|ENSG00000054654|chr14:64051593-64051594|-/A|frameshift_variant;SYNE2|p.F2840Lfs*3|1|0.38|ENSG00000054654|chr14:64052427-64052427|T/-|frameshift_variant;SYNE2|p.F4992Lfs*13|1|0.39|ENSG00000054654|chr14:64140067-64140067|T/-|frameshift_variant;SYNE2|p.K1189Sfs*4|1|0.35|ENSG00000054654|chr14:64000642-64000642|A/-|frameshift_variant;SYNE2|p.L5308Ifs*18|1|0.12|ENSG00000054654|chr14:64158750-64158751|GG/-|frameshift_variant;SYNE2|p.M1669Wfs*6|1|0.36|ENSG00000054654|chr14:64017707-64017707|A/-|frameshift_variant;SYNE2|p.N1656Mfs*19|1|0.18|ENSG00000054654|chr14:64017669-64017669|A/-|frameshift_variant;SYNE2|p.S1830Kfs*9|1|0.34|ENSG00000054654|chr14:64021985-64021986|-/A|frameshift_variant;SYNE2|p.S6651Rfs*83|1|0.29|ENSG00000054654|chr14:64220596-64220597|-/G|frameshift_variant	138.06239232086	0.011389075116295402	2				NaN	NaN	0	NaN	9963	4063	14027
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14029	37.077	NaN	2886.1	30	0	257.25	0.106			+	8629	EDEIAKKL	8	64	473.266168277572	944.517783621944	2	473.2663879394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EDEIAKKL_	REV__ENSG00000160633|ENST00000588852|SAFB;REV__ENST00000586934.5_1_19:5623180-5651054:+|nuORF;REV__nc|ENSG00000160633|Q15424-2|SAFB;REV__nc|ENSG00000160633|Q15424-4|SAFB;REV__nc|ENSG00000160633|Q15424|SAFB;REV__SAFB|p.D823Tfs*19|1|0.2|ENSG00000160633|chr19:5667361-5667361|G/-|frameshift_variant;REV__SAFB|p.G800Afs*8|1|0.41|ENSG00000160633|chr19:5667104-5667104|G/-|frameshift_variant	64.20726635412375	0.4601301477144759	2				NaN	NaN	0	NaN	9964	4063	14027
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14030	37.079	NaN	5076.7	30	0	807.45	0.106			+	46553	VFHVDAVL	8	63	450.2531481450665	898.4917433569331	2	450.253173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VFHVDAVL_	REV__ENST00000412176.1_1_1:24228945-24229221:-|nuORF	46.76643321282427	0.6143254112625767	2				NaN	NaN	0	NaN	9965	4063	14027
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14031	37.081	NaN	5665.9	30	0	768.44	0.106	+			43004	TEKLVAMTM	9	70	512.2647782676747	1022.5150036021495	2	512.2648315429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TEKLVAMTM_	ENSG00000006042|ENST00000579849|TMEM98;ENST00000583120.1_1_17:31258522-31263466:+|nuORF	70.8162118820467	0.13725933411854815	2				NaN	NaN	0	NaN	9966	4063	14027
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14032	37.083	NaN	3585.8	30	0	513.09	0.106			+	40959	SVFYGVIRAL	10	61	375.55360733210136	1123.638992596504	3	375.52471923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVFYGVIRAL_	REV__ENSG00000167315|ENST00000285093|ACAA2;REV__ENST00000419045.1_1_X:48634410-48634758:-|nuORF	27.882242232435846	0.6521336255503853	2				NaN	NaN	0	NaN	9967	4063	14027
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14033	37.085	NaN	3333.8	30	0	293	0.106			+	24441	LGDQTNEPEPS	11	72	593.7649718691167	1185.5153908050333	2	593.7658081054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LGDQTNEPEPS_	REV__PITPNM2|p.D382N|1|0.07|ENSG00000090975|chr12:123001063-123001063|C/T|missense_variant	51.19269402634007	0.4047928213175833	2				NaN	NaN	0	NaN	9968	4063	14027
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14034	37.087	NaN	3095.7	30	0	249.42	0.036	+			49672	VYITRAQLM	9	72	547.8048887328254	1093.5952245324506	2	547.8063354492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VYITRAQLM_	ENSG00000160877|ENST00000292431|NACC1	46.45678178249821	0.34452392205506005	2				NaN	NaN	0	NaN	9969	4063	14027
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14044	37.108	NaN	5646	30	0	595.97	0.214	+			51600	YYQHIVTTL	9	73	569.3007614376133	1136.5869699420266	2	569.3004150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YYQHIVTTL_	ENSG00000116005|ENST00000433351|PCYOX1;nc|ENSG00000116005|Q9UHG3-2|PCYOX1	82.24051045832904	0.08786059719216216	2				NaN	NaN	0	NaN	9976	4066	14043
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14045	37.112	NaN	4183.1	30	0	471.48	0.106	+			18345	IQFNPPLSEK	10	73	586.8194224750898	1171.6242920169796	2	586.8190307617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IQFNPPLSEK_	ENSG00000165097|ENST00000650836|KDM1B;KDM1B|p.E545Gfs*8|1|0.11|ENSG00000165097|chr6:18217825-18217826|-/G|frameshift_variant;nc|ENSG00000165097|Q8NB78-2|KDM1B	50.79123845855914	0.44970922346023856	2				NaN	NaN	0	NaN	9977	4066	14043
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14046	37.114	NaN	3754.3	30	0	716.18	0.106	+			17360	IALGGVIVAS	10	57	450.2817886798563	898.5490244265126	2	450.28173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IALGGVIVAS_	ENSG00000126243|ENST00000246529|LRFN3	45.9519527083369	0.4943008177357963	2				NaN	NaN	0	NaN	9978	4066	14043
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14047	37.116	NaN	4248.2	30	0	346.89	0.106	+			8777	EEIDLSGNKL	10	72	559.291031431282	1116.567509929364	2	559.2919311523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EEIDLSGNKL_	ENSG00000081913|ENST00000262719|PHLPP1;nc|ENSG00000081913|O60346-2|PHLPP1;PHLPP1|p.N1186Tfs*10|1|0.14|ENSG00000081913|chr18:62963464-62963464|A/-|frameshift_variant;PHLPP1|p.T1236Nfs*38|2|0.39|ENSG00000081913|chr18:62972653-62972654|-/A|frameshift_variant	88.17693792209575	0.14151128060301246	2				NaN	NaN	0	NaN	9979	4066	14043
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14048	37.118	NaN	4924.2	30	0	829.95	0.106	+			16005	HAQDYVLTY	9	71	555.2666921504527	1108.5188313677054	2	555.2675170898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HAQDYVLTY_	ENSG00000134755|ENST00000280904|DSC2	40.77816245573522	0.41113185337114944	2				NaN	NaN	0	NaN	9980	4066	14043
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14049	37.119	NaN	3935.9	30	0	470.82	0.106			+	10506	EVTRWQASKK	10	76	616.840587348632	1231.6666217640638	2	616.8397216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EVTRWQASKK_	REV__ENSG00000132305|ENST00000410111|IMMT;REV__ENST00000409258.2_1_2:86386442-86398424:-|nuORF;REV__ENST00000474969.5_1_2:86385703-86422514:-|nuORF;REV__ENST00000490238.5_1_2:86389097-86393741:-|nuORF;REV__nc|ENSG00000132305|Q16891-2|IMMT;REV__nc|ENSG00000132305|Q16891-3|IMMT;REV__nc|ENSG00000132305|Q16891-4|IMMT	32.81241826257853	0.6118718159329168	2				NaN	NaN	0	NaN	9981	4066	14043
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14050	37.121	NaN	4576.5	30	0	455.11	0.036	+			6908	CLVELLGSAL	10	69	537.7949209394155	NaN	0	537.7940063476562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_C(Carbamidomethyl (C))LVELLGSAL_	AQP8|p.M122Cfs*10|2|0.3|ENSG00000103375|chr16:25221554-25221554|G/-|frameshift_variant;ENSG00000103375|ENST00000219660|AQP8	58.78195531508484	0.24422493511477816	2				NaN	NaN	0	NaN	9982	4066	14043
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14061	37.146	NaN	3844.2	30	0	463.5	0.214	+			42461	TAMFIASKY	9	68	516.2651662168877	1030.5157795005753	2	516.264892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAMFIASKY_	ENSG00000134057|ENST00000256442|CCNB1;nc|ENSG00000134057|P14635-2|CCNB1	70.8162118820467	0.13725933411854815	2				NaN	NaN	0	NaN	9990	4069	14060
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14062	37.15	NaN	7899.5	30	0	2592.2	0.106			+	-1	FNDAYAMMVI	10	76	603.7621701327355	1205.509787332271	2	603.7621459960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Oxidation (M)	_FNDAYAM(Oxidation (M))M(Oxidation (M))VI_	REV__ENSG00000151812|ENST00000556826|SLC35F4;REV__nc|ENSG00000151812|A4IF30-2|SLC35F4;REV__nc|ENSG00000151812|A4IF30|SLC35F4	24.519189625965996	0.6795976720565101	2				NaN	NaN	0	NaN	9991	4069	14060
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14063	37.152	NaN	3625.2	30	0	370.81	0.106	+			34768	RYHMLLSF	8	66	533.7799272853161	1065.5453016374322	2	533.7801513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RYHMLLSF_	ENST00000307340.7_1_1:215963551-215972328:-|nuORF	57.81127852772723	0.5234495074909924	2				NaN	NaN	0	NaN	9992	4069	14060
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14064	37.154	NaN	4623.2	30	0	710.36	0.106				-1	VEQMFETFDFN	11	89	711.7988126262804	1421.5830723193608	2	711.79638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_VEQM(Oxidation (M))FETFDFN_	ENSG00000048545|ENST00000372958|GUCA1A	24.231819034082204	0.7356191775841856	2				NaN	NaN	0	NaN	9993	4069	14060
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14065	37.155	NaN	3982.6	30	0	1009.7	0.106	+			11179	FGVAIEFLNN	10	75	562.2945338875124	1122.5745148418248	2	562.2943115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FGVAIEFLNN_	tr|U7T5Q7|U7T5Q7_FUSNUCelldivisiontransportsystempermeaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00049PE=4SV=1	49.44154591367651	0.46214596422418036	2				NaN	NaN	0	NaN	9994	4069	14060
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14066	37.157	NaN	5092.5	30	0	803.47	0.106	+			46867	VILAPSGPKG	10	68	469.78688165690346	937.5592103806069	2	469.78607177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VILAPSGPKG_	COL16A1|p.T329I|1|0.2|ENSG00000084636|chr1:31694166-31694166|G/A|missense_variant	64.20726635412375	0.3275756395432415	2				NaN	NaN	0	NaN	9995	4069	14060
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14067	37.159	NaN	4502.1	30	0	993.24	0.037				-1	SRLNHMLAM	9	57	368.8476165477746	1103.5210202435237	3	368.8476867675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Oxidation (M)	_SRLNHM(Oxidation (M))LAM(Oxidation (M))_	ENSG00000101447|ENST00000619850|FAM83D;nc|ENSG00000101447|Q9H4H8-2|FAM83D	29.170058357718403	0.5306379469863586	2				NaN	NaN	0	NaN	9996	4069	14060
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14079	37.184	NaN	24993	30	0	2911.5	0.214	+			18433	ISCVNLAFK	9	88	526.2839215320682	1050.5532901309364	2	526.2840576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_ISC(Carbamidomethyl (C))VNLAFK_	ENST00000227758.6_3_11:102219989-102220022:+|nuORF	180.86945649972546	0.001208757763874378	2				NaN	NaN	0	NaN	10005	4072	14078
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14080	37.188	NaN	6460.8	30	0	491.85	0.106	+			6550	AYINRASLL	9	71	510.79537665493405	1019.5762003766681	2	510.79547119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AYINRASLL_	ENSG00000138663|ENST00000264389|COPS4;nc|ENSG00000138663|Q9BT78-2|COPS4	87.69643885390035	0.07135982304947239	2				NaN	NaN	0	NaN	10006	4072	14078
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14081	37.19	NaN	6190.6	30	0	2357.4	0.106			+	-1	YLCASVHLV	9	61	531.2772582308769	1060.5399635285537	2	531.2777099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_YLC(Carbamidomethyl (C))ASVHLV_	REV__ENST00000379979.8_1_5:95150348-95150648:-|nuORF	26.79610172149135	0.5528238334041078	2				NaN	NaN	0	NaN	10007	4072	14078
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14082	37.192	NaN	5251.3	30	0	663.54	0.106			+	9328	EIGYWYGPA	9	77	528.2451355940756	1054.475718254951	2	528.244873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EIGYWYGPA_	REV__CLIP4|p.N665Mfs*20|1|0.1|ENSG00000115295|chr2:29181764-29181764|A/-|frameshift_variant;REV__ENSG00000105270|ENST00000360535|CLIP3;REV__ENSG00000115295|ENST00000320081|CLIP4;REV__ENST00000415891.5_1_2:29380207-29397312:+|nuORF;REV__ENST00000493551.1_1_2:29383269-29390459:+|nuORF;REV__nc|ENSG00000115295|Q8N3C7-3|CLIP4	60.29395666154354	0.21116425950210296	2				NaN	NaN	0	NaN	10008	4072	14078
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14083	37.194	NaN	3143.4	30	0	463.12	0.106			+	8145	EAAERSALI	9	60	480.26120845043334	NaN	0	480.26116943359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EAAERSALI_	REV__ENST00000579726.5_2_17:61562598-61563979:+|nuORF	36.446750945000026	0.29355505452396785	2				NaN	NaN	0	NaN	10009	4072	14078
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14084	37.195	NaN	3164.7	30	0	335.53	0.106	+			20815	KIFIDKIY	8	64	520.310749288546	NaN	0	520.3108520507812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KIFIDKIY_	ENSG00000168116|ENST00000370733|KIAA1586;KIAA1586|p.S537Qfs*20|1|0.31|ENSG00000168116|chr6:57054105-57054105|T/-|frameshift_variant;nc|ENSG00000168116|Q9HCI6-2|KIAA1586	27.882242232435846	1.7418937515398478	2				NaN	NaN	0	NaN	10010	4072	14078
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14085	37.197	NaN	4857.1	30	0	573.45	0.037			+	-1	VMGRTSGSVQL	11	80	575.7985865349831	1149.582620136766	2	575.7984619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_VM(Oxidation (M))GRTSGSVQL_	REV__ENSG00000164821|ENST00000297435|DEFA4	63.53385203322761	0.2919106290768168	2				NaN	NaN	0	NaN	10011	4072	14078
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14097	37.223	NaN	7291.5	30	0	818.4	0.214	+			42809	TEAQANQISL	10	72	537.7749177749637	1073.5352826167273	2	537.7754516601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEAQANQISL_	ENSG00000110442|ENST00000263401|COMMD9;nc|ENSG00000110442|Q9P000-2|COMMD9	120.27252224102466	0.026944837168485097	2				NaN	NaN	0	NaN	10020	4075	14096
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14098	37.227	NaN	5979.8	30	0	1275.2	0.106	+			23229	KYGSVTVW	8	72	470.2506845689087	938.4868162046174	2	470.2501220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KYGSVTVW_	ENSG00000149923|ENST00000279387|PPP4C;ENST00000566749.5_1_16:30094185-30096380:+|nuORF;ENST00000567040.5_1_16:30087698-30094972:+|nuORF	42.396135135203025	0.6414440140393314	2				NaN	NaN	0	NaN	10021	4075	14096
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14099	37.229	NaN	5342.1	30	0	494.82	0.106	+			23911	LDLKATQAL	9	75	486.7898589498993	971.5651649665987	2	486.78961181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LDLKATQAL_	ENSG00000161960|ENST00000293831|EIF4A1;ENST00000428062.1_1_13:37513331-37513424:-|nuORF;ENST00000550578.1_1_12:53547103-53547616:+|nuORF;ENST00000578324.5_1_17:7477602-7481249:+|nuORF;ENST00000578754.5_2_17:7476163-7480421:+|nuORF;ENST00000580461.5_1_17:7476163-7478717:+|nuORF;ENST00000581621.1_1_17:7476159-7481249:+|nuORF;ENST00000582848.5_1_17:7476159-7480015:+|nuORF;ENST00000584712.5_1_17:7476159-7478717:+|nuORF;ENST00000584901.5_1_17:7476159-7480015:+|nuORF;nc|ENSG00000161960|P60842-2|EIF4A1	101.45984612302182	0.0377122763612125	2				NaN	NaN	0	NaN	10022	4075	14096
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14100	37.231	NaN	5157.2	30	0	638.43	0.106	+			12114	GAETKNLQLL	10	66	543.8116219393719	1085.6086909455437	2	543.8118286132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GAETKNLQLL_	ENSG00000169981|ENST00000396056|ZNF35	56.43379154798735	0.3982744522255666	2				NaN	NaN	0	NaN	10023	4075	14096
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14101	37.232	NaN	3800.9	30	0	347.85	0.106	+			11833	FSVTGRVL	8	60	439.758473768353	877.502394603506	2	439.7583312988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FSVTGRVL_	ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;nc|ENSG00000185164|Q5JPE7-3|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2;NOMO1|p.P1102Hfs*42|1|0.36|ENSG00000103512|chr16:14886838-14886838|C/-|frameshift_variant	39.252832667884924	0.6609488554722044	2				NaN	NaN	0	NaN	10024	4075	14096
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14102	37.234	NaN	2183.1	30	0	247.73	0.106	+			1080	AELALKTL	8	66	429.7682941623042	857.5220353914084	2	429.7680358886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AELALKTL_	ENSG00000136813|ENST00000684092|ECPAS;nc|ENSG00000136813|Q5VYK3|ECPAS	90.60085204095205	0.2756512185673585	2				NaN	NaN	0	NaN	10025	4075	14096
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14103	37.236	NaN	5030.2	30	0	401.73	0.038	+			45575	TYMKDLYQL	9	74	595.7917071007394	1189.5688612682786	2	595.7913208007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_TYM(Oxidation (M))KDLYQL_	ENSG00000146376|ENST00000368149|ARHGAP18;nc|ENSG00000146376|Q8N392-2|ARHGAP18	58.22992032128504	0.22837015374068087	2				NaN	NaN	0	NaN	10026	4075	14096
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14114	37.262	NaN	84392	30	0	17381	0.214	+			41588	SVQGIIIYR	9	87	524.8112365530179	1047.6079201728357	2	524.8111572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVQGIIIYR_	ENSG00000005022|ENST00000317881|SLC25A5;ENSG00000151729|ENST00000281456|SLC25A4;ENSG00000169100|ENST00000381401|SLC25A6;ENST00000406156.2_1_6:121975405-121975696:+|nuORF;ENST00000435239.1_1_7:32511604-32512018:+|nuORF	150.36159442982594	0.006784847064083231	2				NaN	NaN	0	NaN	10034	4078	14113
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14115	37.265	NaN	12108	30	0	2241.6	0.106	+			34841	RYPTSIASL	9	69	504.27946390635276	1006.5443748795055	2	504.2795104980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RYPTSIASL_	ENSG00000154473|ENST00000368865|BUB3;ENST00000481952.1_1_10:124921781-124922345:+|nuORF;nc|ENSG00000154473|O43684-2|BUB3	107.00750918261382	0.032051501805654005	2				NaN	NaN	0	NaN	10035	4078	14113
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14116	37.267	NaN	8354.2	30	0	775.05	0.106	+			20008	KEIGELTQL	9	77	515.7930870044506	1029.5716210757012	2	515.79296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEIGELTQL_	ENSG00000148484|ENST00000345264|RSU1;ENST00000464074.6_1_10:16769067-16859404:-|nuORF;nc|ENSG00000148484|Q15404-2|RSU1	91.26522074875469	0.06129826844580791	2				NaN	NaN	0	NaN	10036	4078	14113
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14117	37.269	NaN	5366.9	30	0	553.1	0.106	+			49680	VYKETCISF	9	75	573.7792165564665	1145.543880179733	2	573.7789306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_VYKETC(Carbamidomethyl (C))ISF_	ENSG00000127324|ENST00000247829|TSPAN8;ENST00000552128.2_1_12:71519116-71532942:-|nuORF	67.49366992349736	0.1516260258713357	2				NaN	NaN	0	NaN	10037	4078	14113
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14118	37.271	NaN	5187.4	30	0	640.6	0.106	+			29296	NYKDLNGNVF	10	68	592.2907222503776	1182.566891567555	2	592.2908325195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NYKDLNGNVF_	ENSG00000124783|ENST00000244763|SSR1;nc|ENSG00000124783|P43307-2|SSR1	58.22992032128504	0.38193887838457763	2				NaN	NaN	0	NaN	10038	4078	14113
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14119	37.273	NaN	3719.8	30	0	458	0.106			+	25226	LMVYPDELI	9	70	554.7850282017591	1107.5555034703182	2	554.7849731445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_LM(Oxidation (M))VYPDELI_	REV__ENSG00000155511|ENST00000285900|GRIA1;REV__ENST00000481559.6_1_5:152869375-153085697:+|nuORF;REV__nc|ENSG00000155511|P42261-2|GRIA1;REV__nc|ENSG00000155511|P42261-3|GRIA1;REV__nc|ENSG00000155511|P42261-4|GRIA1;REV__nc|ENSG00000155511|P42261-5|GRIA1;REV__nc|ENSG00000155511|P42261-6|GRIA1	55.50420428727701	0.2510918378945873	2				NaN	NaN	0	NaN	10039	4078	14113
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14120	37.275	NaN	3705.5	30	0	563.24	0.035	+			41133	SVITQVLNK	9	65	501.3019534282872	1000.5893539233745	2	501.302978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVITQVLNK_	ENSG00000164985|ENST00000380733|PSIP1;PSIP1|p.S443Y|1|0.29|ENSG00000164985|chr9:15468722-15468722|G/T|missense_variant	51.19269402634007	0.2889735674168909	2				NaN	NaN	0	NaN	10040	4078	14113
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14129	37.296	NaN	5946.7	30	0	1108.4	0.214				-1	 	0	55	336.5340881535948	1006.5804350609844	3	336.5342102050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10046	4081	14128
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14130	37.3	NaN	3176.6	30	0	274	0.106	+			1154	AEMYVAKF	8	68	479.73855228610546	957.4625516390109	2	479.7384033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEMYVAKF_	EEF2|p.E241Rfs*13|1|0.26|ENSG00000167658|chr19:3982316-3982316|C/-|frameshift_variant;ENSG00000167658|ENST00000309311|EEF2	76.7741389293348	0.3504530765139327	2				NaN	NaN	0	NaN	10047	4081	14128
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14131	37.302	NaN	3049.8	30	0	227.27	0.106			+	42756	TDRIPTVSV	9	63	494.2765256073342	986.5384982814684	2	494.2772521972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TDRIPTVSV_	REV__ENSG00000152601|ENST00000324210|MBNL1;REV__ENST00000461436.1_1_3:152017982-152019737:+|nuORF;REV__nc|ENSG00000152601|Q9NR56-2|MBNL1;REV__nc|ENSG00000152601|Q9NR56-3|MBNL1;REV__nc|ENSG00000152601|Q9NR56-4|MBNL1;REV__nc|ENSG00000152601|Q9NR56-6|MBNL1;REV__nc|ENSG00000152601|Q9NR56-7|MBNL1;REV__nc|ENSG00000152601|Q9NR56|MBNL1	35.15202426646627	0.4747332964206883	2				NaN	NaN	0	NaN	10048	4081	14128
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14132	37.303	NaN	2572.8	30	0	621.2	0.106			+	50980	YILRNPTT	8	61	489.2742883263494	976.5340237194988	2	489.2733154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YILRNPTT_	REV__ENSG00000278053|ENST00000617633|DDX52	20.481830146152948	0.8005983782650069	2				NaN	NaN	0	NaN	10049	4081	14128
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14133	37.305	NaN	4036	30	0	349.01	0.106	+			27009	LYQVVSQRF	9	70	570.314560037301	1138.614567141402	2	570.313720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LYQVVSQRF_	ENST00000493220.5_2_17:29556858-29657521:+|nuORF;nc|ENSG00000196712|P21359-2|NF1;nc|ENSG00000196712|P21359-6|NF1	75.65223720490533	0.11634833104049533	2				NaN	NaN	0	NaN	10050	4081	14128
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14134	37.307	NaN	1294.3	30	0	136.3	0.106	+			25958	LSIKKVPKKL	10	52	385.27386420114294	NaN	0	385.2736511230469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSIKKVPKKL_	tr|U7SJJ5|U7SJJ5_FUSNUAminobenzoyl-glutamatetransporterOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02072PE=4SV=1	14.693671053092006	0.4201028297492154	2				NaN	NaN	0	NaN	10051	4081	14128
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14135	37.309	NaN	1930.5	30	0	238.06	0.035	+			7344	DAWLSSYAI	9	55	513.2515133842479	1024.4884738352957	2	513.2523803710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DAWLSSYAI_	CASP5|p.K187Rfs*33|1|0.29|ENSG00000137757|chr11:105002185-105002185|T/-|frameshift_variant	38.80614096846853	0.43426287593479557	2				NaN	NaN	0	NaN	10052	4081	14128
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14144	37.329	NaN	6054.1	30	0	462.13	0.214	+			11923	FVDEGIKTL	9	75	511.2817518862758	1020.5489508393516	2	511.2819519042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FVDEGIKTL_	ENSG00000070501|ENST00000265421|POLB	66.96192283764107	0.15557981141143568	2				NaN	NaN	0	NaN	10058	4084	14143
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14145	37.332	NaN	6695.5	30	0	937.76	0.106	+			35922	SEFYKHIVL	9	74	568.3108298198782	1134.6071067065564	2	568.3112182617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEFYKHIVL_	ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2	84.9155231211612	0.07920012719736333	2				NaN	NaN	0	NaN	10059	4084	14143
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14146	37.334	NaN	4660.8	30	0	383.61	0.106			+	25145	LLSGGENATKL	11	73	551.8085925362175	1101.6026321392349	2	551.8099975585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LLSGGENATKL_	REV__ENSG00000134294|ENST00000256689|SLC38A2;REV__nc|ENSG00000134294|Q96QD8-2|SLC38A2;REV__SLC38A2|p.F332Cfs*28|1|0.09|ENSG00000134294|chr12:46363785-46363786|-/CAAAAACAAAAAC|frameshift_variant	51.52775601994872	0.4002081502334604	2				NaN	NaN	0	NaN	10060	4084	14143
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14147	37.336	NaN	6248.1	30	0	1694.3	0.106			+	-1	SEMEKKRLV	9	82	379.20963812397235	1134.607084972117	3	379.54400634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_SEM(Oxidation (M))EKKRLV_	REV__ENSG00000180353|ENST00000314583|HCLS1;REV__ENST00000481314.5_1_3:121363541-121379717:-|nuORF;REV__ENST00000487290.5_1_3:121363549-121379717:-|nuORF;REV__nc|ENSG00000180353|P14317-2|HCLS1	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	10061	4084	14143
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14148	37.338	NaN	4248.4	30	0	573.61	0.106	+			50049	WEQAFQMAES	10	77	613.7616557374791	1225.5087585417582	2	613.7611083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_WEQAFQMAES_	MSTB_dup6501|chr13:43061603-43061850:-|1.279567223268373|0.2367443632259002|2.43|470.0|10|1|anti-sense	45.97224482568171	0.49411383603842696	2				NaN	NaN	0	NaN	10062	4084	14143
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14149	37.34	NaN	4808.2	30	0	507.72	0.106				-1	GRCRGRIPRRE	11	78	706.8911504156308	1411.7677478980615	2	706.8878784179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_GRC(Carbamidomethyl (C))RGRIPRRE_	ENST00000253462.7_1_16:85721160-85722526:-|nuORF	23.52269567125451	0.7430573033454468	2				NaN	NaN	0	NaN	10063	4084	14143
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14150	37.341	NaN	2694.6	30	0	379.96	0.034			+	15841	GWLLWLAL	8	68	486.2906269665957	NaN	0	486.29034423828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GWLLWLAL_	REV__ENSG00000167323|ENST00000526596|STIM1;REV__nc|ENSG00000167323|Q13586-2|STIM1;REV__nc|ENSG00000167323|Q13586|STIM1	35.200714571348534	1.7418937515398478	2				NaN	NaN	0	NaN	10064	4084	14143
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14159	37.363	NaN	6749.1	30	0	830.67	0.214			+	9404	EKGEPIAPLK	10	69	541.316281332487	1080.618009731774	2	541.3164672851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EKGEPIAPLK_	REV__ARFGEF3|p.S538L|1|0.28|ENSG00000112379|chr6:138263096-138263096|C/T|missense_variant	30.317721548370564	0.6322445173429027	2				NaN	NaN	0	NaN	10070	4087	14158
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14160	37.366	NaN	5065.9	30	0	1094.3	0.106				-1	 	0	61	465.71121677325823	929.4078806133165	2	465.7106628417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10071	4087	14158
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14161	37.368	NaN	6438.9	30	0	723.9	0.106			+	17538	IDQVKQIFP	9	67	544.3110989860521	1086.6076450389041	2	544.3207397460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IDQVKQIFP_	REV__ENSG00000065600|ENST00000261455|PACC1;REV__nc|ENSG00000065600|Q9H813-2|PACC1	58.78195531508484	0.22376836668196862	2				NaN	NaN	0	NaN	10072	4087	14158
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14162	37.37	NaN	3610	30	0	328.21	0.106	+			47386	VPITDQHIL	9	70	518.2955791528573	1034.5766053725145	2	518.2955932617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VPITDQHIL_	ENSG00000163874|ENST00000373087|ZC3H12A;ZC3H12A|p.P532Qfs*41|1|0.51|ENSG00000163874|chr1:37483402-37483402|C/-|frameshift_variant	51.19269402634007	0.2889735674168909	2				NaN	NaN	0	NaN	10073	4087	14158
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14163	37.372	NaN	2374.7	30	0	201.8	0.106			+	23707	LAVAHETSVA	10	66	499.269778392186	996.5250038511721	2	499.27056884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LAVAHETSVA_	REV__ENSG00000007350|ENST00000369915|TKTL1;REV__nc|ENSG00000007350|P51854-1|TKTL1;REV__nc|ENSG00000007350|P51854-4|TKTL1	47.95952297671804	0.47580206326914537	2				NaN	NaN	0	NaN	10074	4087	14158
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14164	37.374	NaN	2776.3	30	0	401.74	0.106	+			23928	LDPLYVVEVL	10	61	580.3322143554688	NaN	0	580.3322143554688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LDPLYVVEVL_	ENSG00000039123|ENST00000230640|MTREX	34.172542307311794	0.38797011891751465	2				NaN	NaN	0	NaN	10075	4087	14158
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14165	37.376	NaN	3241	30	0	713.01	0.036	+			30163	PSETVLCKVP	10	67	536.7894586100272	NaN	0	536.7896118164062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PSETVLCKVP_	ENST00000437111.1_1_10:52389508-52390123:-|nuORF	32.81241826257853	0.3924360933802784	2				NaN	NaN	0	NaN	10076	4087	14158
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14173	37.395	NaN	4491	30	0	626.66	0.214	+			18925	IVNDFAYMK	9	80	550.7762115283657	1099.5378701235313	2	550.7764282226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IVNDFAYMK_	ENSG00000170348|ENST00000303575|TMED10;ENST00000534816.1_1_8:146220430-146220868:+|nuORF;ENST00000555036.1_1_14:75602424-75614456:-|nuORF;ENST00000555873.1_1_14:75601590-75605782:-|nuORF;ENST00000556969.5_1_14:75601590-75614465:-|nuORF	83.6470233535746	0.08277643980271215	2				NaN	NaN	0	NaN	10081	4090	14172
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14174	37.399	NaN	4285.4	30	0	704.95	0.106	+			10619	EYNKSWQTF	9	71	601.777601761109	1201.540650589018	2	601.7771606445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EYNKSWQTF_	ENSG00000198440|ENST00000333201|ZNF583	79.71258880314673	0.09879134589249085	2				NaN	NaN	0	NaN	10082	4090	14172
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14175	37.401	NaN	4594.6	30	0	374.42	0.106	+			26748	LVNAYHLKM	9	72	552.7965167571322	1103.5784805810642	2	552.7962646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_LVNAYHLKM(Oxidation (M))_	ENST00000398117.1_1_18:60792389-60792626:-|nuORF	73.97473282117947	0.12360187025703594	2				NaN	NaN	0	NaN	10083	4090	14172
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14176	37.403	NaN	4858.2	30	0	480.41	0.106	+			15255	GTTEWFHLK	9	71	559.785513318047	1117.556473702894	2	560.2877197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTTEWFHLK_	ENSG00000092929|ENST00000207549|UNC13D;ENST00000591563.5_1_17:73828844-73835996:-|nuORF;nc|ENSG00000092929|Q70J99-3|UNC13D	60.11826168202944	0.21262886028301267	2				NaN	NaN	0	NaN	10084	4090	14172
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14177	37.405	NaN	2798.3	30	0	389.7	0.106	+			34536	RVIDVFAM	8	60	475.7599946608908	NaN	0	475.7596435546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RVIDVFAM_	ENSG00000115233|ENST00000409682|PSMD14;PSMD14|p.V67I|1|0.04|ENSG00000115233|chr2:161367862-161367862|G/A|missense_variant	33.51558372728122	1.7418937515398478	2				NaN	NaN	0	NaN	10085	4090	14172
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14178	37.406	NaN	5239.3	30	0	495.93	0.106	+			33198	REYQELMNV	9	72	591.2845489449038	1180.5545449566075	2	591.2833862304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_REYQELMNV_	CON__H-INV:HIT000292931;CON__P05787;CON__Q8BGZ7;CON__Q9H552;ENSG00000170421|ENST00000692008|KRT8;ENST00000409686.2_1_9:102067468-102068890:+|nuORF;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;ENST00000547031.5_1_12:53292389-53294972:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	10086	4090	14172
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14179	37.408	NaN	3910.3	30	0	702.1	0.034	+			28672	NLSIDGKIL	9	75	486.7900484804592	971.5655440277184	2	486.7898864746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NLSIDGKIL_	ENSG00000090686|ENST00000308271|USP48;ENST00000464577.1_1_1:22013654-22030763:-|nuORF;nc|ENSG00000090686|Q86UV5-2|USP48;nc|ENSG00000090686|Q86UV5-5|USP48;nc|ENSG00000090686|Q86UV5-6|USP48;nc|ENSG00000090686|Q86UV5-8|USP48	40.77816245573522	0.41113185337114944	2				NaN	NaN	0	NaN	10087	4090	14172
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14188	37.428	NaN	4667.8	30	0	918.52	0.214	+			2091	ALFDGVVSK	9	58	468.2636652767194	934.5127776202388	2	468.26348876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ALFDGVVSK_	ENSG00000151806|ENST00000281543|GUF1;ENST00000506793.5_1_4:44680541-44700695:+|nuORF;GUF1|p.K645Sfs*2|5|0.23|ENSG00000151806|chr4:44698598-44698598|A/-|frameshift_variant	60.11826168202944	0.21262886028301267	2				NaN	NaN	0	NaN	10093	4093	14187
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14189	37.432	NaN	5075.8	30	0	1513.7	0.106	+			31162	QGIVPFGGITV	11	72	544.3110989860521	1086.6076450389041	2	544.3118286132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QGIVPFGGITV_	CFAP47|p.F1567Vfs*4|1|0.31|ENSG00000165164|chrX:36098829-36098830|-/G|frameshift_variant;CFAP47|p.H2345Afs*15|1|0.09|ENSG00000165164|chrX:36236809-36236810|-/A|frameshift_variant;CFAP47|p.P2326Tfs*34|1|0.26|ENSG00000165164|chrX:36236751-36236752|-/A|frameshift_variant;ENSG00000165164|ENST00000378653|CFAP47;nc|ENSG00000165164|Q6ZTR5-6|CFAP47	44.377184641726394	0.49804979881800077	2				NaN	NaN	0	NaN	10094	4093	14187
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14190	37.434	NaN	4995.2	30	0	515.22	0.106	+			46249	VEERNLLSV	9	67	529.7958690986022	1057.5771852640044	2	529.7962646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VEERNLLSV_	ENSG00000108953|ENST00000264335|YWHAE;ENST00000486241.1_1_17:1265194-1303470:-|nuORF;ENST00000489287.1_1_17:1268113-1303470:-|nuORF;nc|ENSG00000108953|P62258-2|YWHAE	63.53385203322761	0.18415635464017938	2				NaN	NaN	0	NaN	10095	4093	14187
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14191	37.436	NaN	2658.2	30	0	280.62	0.106	+			36125	SEKQEFYQL	9	66	586.284657805803	1170.554762678406	2	586.285400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SEKQEFYQL_	ENSG00000137040|ENST00000259569|RANBP6	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	10096	4093	14187
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14192	37.437	NaN	3455.4	30	0	461.13	0.106				-1	QIKTIWSTM	9	70	562.2945338875124	1122.5745148418248	2	562.799560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_QIKTIWSTM(Oxidation (M))_	ENSG00000001630|ENST00000003100|CYP51A1;nc|ENSG00000001630|Q16850-2|CYP51A1	27.882242232435846	0.5426732730940306	2				NaN	NaN	0	NaN	10097	4093	14187
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14193	37.439	NaN	2064.4	30	0	318.26	0.106			+	42684	TCLLVGPLNN	10	55	522.280731439933	1042.546909946666	2	522.2809448242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TCLLVGPLNN_	REV__ENSG00000243232|ENST00000289269|PCDHAC2;REV__nc|ENSG00000243232|Q9Y5I4-2|PCDHAC2;REV__PCDHAC2|p.Y622Lfs*8|1|0.23|ENSG00000243232|chr5:140968624-140968625|-/T|frameshift_variant	32.81241826257853	0.6118718159329168	2				NaN	NaN	0	NaN	10098	4093	14187
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14194	37.441	NaN	3540.2	30	0	1068.4	0.034	+			9051	EGGDGPEQR	9	65	472.7052717017038	NaN	0	472.7055358886719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EGGDGPEQR_	ENSG00000133401|ENST00000438447|PDZD2;ENST00000502824.1_1_5:31799421-31843499:+|nuORF;nc|ENSG00000133401|O15018-2|PDZD2;PDZD2|p.D2774Rfs*7|1|0.29|ENSG00000133401|chr5:32101201-32101202|-/G|frameshift_variant;PDZD2|p.E2629Kfs*37|1|0.23|ENSG00000133401|chr5:32097314-32097314|A/-|frameshift_variant;PDZD2|p.G594Afs*45|1|0.09|ENSG00000133401|chr5:32052720-32052720|A/-|frameshift_variant;PDZD2|p.K104Qfs*38|1|0.42|ENSG00000133401|chr5:31799549-31799550|-/G|frameshift_variant;PDZD2|p.K1843Rfs*31|3|0.26|ENSG00000133401|chr5:32088970-32088970|A/-|frameshift_variant;PDZD2|p.Q1108Sfs*17|1|0.35|ENSG00000133401|chr5:32074423-32074423|C/-|frameshift_variant;PDZD2|p.S2770Gfs*12|1|0.04|ENSG00000133401|chr5:32101193-32101194|-/GGGT|frameshift_variant;PDZD2|p.V1845Rfs*6|2|0.38|ENSG00000133401|chr5:32088969-32088970|-/A|frameshift_variant	42.396135135203025	0.2590952873412954	2				NaN	NaN	0	NaN	10099	4093	14187
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14205	37.466	NaN	3683	30	0	477.42	0.214	+			46613	VFTTQLNSI	9	69	511.7797609379369	1021.5449689426738	2	511.7798767089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VFTTQLNSI_	ENSG00000137872|ENST00000536845|SEMA6D;nc|ENSG00000137872|Q8NFY4-2|SEMA6D;nc|ENSG00000137872|Q8NFY4-3|SEMA6D;nc|ENSG00000137872|Q8NFY4-4|SEMA6D;nc|ENSG00000137872|Q8NFY4-5|SEMA6D;nc|ENSG00000137872|Q8NFY4-6|SEMA6D;nc|ENSG00000137872|Q8NFY4-7|SEMA6D;nc|ENSG00000137872|Q8NFY4-8|SEMA6D;SEMA6D|p.K486Rfs*51|1|0.26|ENSG00000137872|chr15:47765894-47765894|A/-|frameshift_variant	71.87747018426188	0.13267044672804276	2				NaN	NaN	0	NaN	10107	4096	14204
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14206	37.47	NaN	4600.5	30	0	1128.8	0.106	+			12723	GEKTISVVL	9	57	473.2847350478173	944.5549171624347	2	473.28411865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEKTISVVL_	ENSG00000073050|ENST00000262887|XRCC1;ENST00000594511.1_1_19:44078923-44079610:-|nuORF;ENST00000595789.5_1_19:44056953-44079610:-|nuORF	85.16082228582465	0.07850854922700509	2				NaN	NaN	0	NaN	10108	4096	14204
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14207	37.472	NaN	3168.2	30	0	392.11	0.106	+			6678	AYVHMVTHF	9	61	552.7687446461522	1103.5229363591043	2	552.7698364257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AYVHMVTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	31.954861631926434	0.5046124803899898	2				NaN	NaN	0	NaN	10109	4096	14204
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14208	37.473	NaN	1880.6	30	0	250.64	0.033	+			7188	DAHISSML	8	59	437.21013576503054	872.4057185968611	2	437.2103271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DAHISSML_	ENSG00000096433|ENST00000605930|ITPR3;ITPR3|p.N1746Tfs*30|1|0.2|ENSG00000096433|chr6:33684872-33684872|A/-|frameshift_variant;ITPR3|p.R2604Gfs*30|1|0.27|ENSG00000096433|chr6:33694944-33694944|C/-|frameshift_variant	79.9392285194092	0.32408006123154964	2				NaN	NaN	0	NaN	10110	4096	14204
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14220	37.499	NaN	4755.2	30	0	665.24	0.214	+			44780	TTQKLVLEY	9	71	547.8082697959536	1093.6019866587071	2	547.8084106445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTQKLVLEY_	ENSG00000136848|ENST00000408936|DAB2IP;nc|ENSG00000136848|Q5VWQ8-2|DAB2IP;nc|ENSG00000136848|Q5VWQ8-3|DAB2IP;nc|ENSG00000136848|Q5VWQ8-4|DAB2IP;nc|ENSG00000136848|Q5VWQ8-5|DAB2IP	75.04331003522576	0.118981335847003	2				NaN	NaN	0	NaN	10119	4099	14219
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14221	37.502	NaN	3043	30	0	672.01	0.106			+	6523	AYDGNLHTIT	10	58	368.84796999236926	NaN	0	368.84796142578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AYDGNLHTIT_	REV__CDH4|p.R666H|1|0.12|ENSG00000179242|chr20:61928415-61928415|G/A|missense_variant	27.047317107675042	0.41136583337917604	2				NaN	NaN	0	NaN	10120	4099	14219
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14222	37.504	NaN	3281.1	30	0	554.2	0.106			+	16719	HLFKRHTE	8	64	534.2924188542719	1066.5702847753437	2	534.2930297851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HLFKRHTE_	REV__ENST00000360868.7_1_9:95085743-95086412:-|nuORF;REV__ENST00000542053.5_1_9:95085743-95087590:-|nuORF	37.028477286268924	0.6747514403204248	2				NaN	NaN	0	NaN	10121	4099	14219
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14223	37.506	NaN	2664.5	30	0	303.62	0.106	+			37716	SLSTVLLGLH	10	64	520.310749288546	NaN	0	520.309326171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLSTVLLGLH_	ENSG00000072121|ENST00000347230|ZFYVE26;ENST00000554523.5_1_14:68228796-68282710:-|nuORF;nc|ENSG00000072121|Q68DK2-2|ZFYVE26;nc|ENSG00000072121|Q68DK2-5|ZFYVE26;ZFYVE26|p.D2439Efs*31|1|0.04|ENSG00000072121|chr14:67752398-67752399|-/T|frameshift_variant;ZFYVE26|p.D2513Mfs*3|1|0.29|ENSG00000072121|chr14:67748519-67748519|C/-|frameshift_variant;ZFYVE26|p.P1734Lfs*10|1|0.08|ENSG00000072121|chr14:67775880-67775880|G/-|frameshift_variant	30.503639358989545	0.4000169810673414	2				NaN	NaN	0	NaN	10122	4099	14219
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14224	37.508	NaN	2703.6	30	0	324.06	0.106			+	13150	GGPLKLDVEG	10	62	492.7727104409267	NaN	0	492.7713623046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GGPLKLDVEG_	REV__ENSG00000213390|ENST00000358531|ARHGAP19;REV__ENST00000493068.2_1_10:99025521-99052393:-|nuORF;REV__nc|ENSG00000213390|Q14CB8-2|ARHGAP19;REV__nc|ENSG00000213390|Q14CB8-3|ARHGAP19;REV__nc|ENSG00000213390|Q14CB8-5|ARHGAP19;REV__nc|ENSG00000213390|Q14CB8-6|ARHGAP19;REV__nc|ENSG00000213390|Q14CB8-7|ARHGAP19	35.15202426646627	0.38475398474706135	2				NaN	NaN	0	NaN	10123	4099	14219
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14225	37.51	NaN	3900.3	30	0	427.44	0.037	+			10956	FDYNSQQQL	9	71	571.7602389004053	1141.5059248676105	2	571.7606811523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FDYNSQQQL_	ENSG00000055917|ENST00000361078|PUM2;ENSG00000134644|ENST00000426105|PUM1;nc|ENSG00000055917|Q8TB72-2|PUM2;nc|ENSG00000055917|Q8TB72-4|PUM2;nc|ENSG00000055917|Q8TB72|PUM2;nc|ENSG00000134644|Q14671-2|PUM1;nc|ENSG00000134644|Q14671-4|PUM1;nc|ENSG00000134644|Q14671|PUM1	80.45461616416974	0.09558281504443908	2				NaN	NaN	0	NaN	10124	4099	14219
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14234	37.53	NaN	7080.4	30	0	957.15	0.214	+			49270	VVQDGITLITK	11	76	593.8556738313873	1185.6967947295745	2	593.8557739257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVQDGITLITK_	ENSG00000079246|ENST00000392132|XRCC5	149.94371410395783	7.060590642135954E-05	2				NaN	NaN	0	NaN	10130	4102	14233
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14235	37.533	NaN	7452.1	30	0	447.57	0.106	+			46527	VEYQMKSVL	9	76	548.7888444010966	1095.5631358689932	2	548.789306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VEYQMKSVL_	ENSG00000159140|ENST00000356577|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-4|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-6|SON;nc|ENSG00000159140|P18583-7|SON;nc|ENSG00000159140|P18583-8|SON;nc|ENSG00000159140|P18583-9|SON	80.45461616416974	0.09558281504443908	2				NaN	NaN	0	NaN	10131	4102	14233
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14236	37.535	NaN	3614.9	30	0	1345.5	0.106	+			8823	EELLFSHKL	9	62	558.308215718119	1114.6018785030378	2	558.3087768554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EELLFSHKL_	ENSG00000099290|ENST00000282633|WASHC2A;ENSG00000172661|ENST00000623400|WASHC2C;ENST00000374359.1_1_10:46274511-46281094:+|nuORF;nc|ENSG00000099290|Q641Q2-2|WASHC2A;nc|ENSG00000172661|Q9Y4E1-1|WASHC2C;nc|ENSG00000172661|Q9Y4E1-2|WASHC2C;nc|ENSG00000172661|Q9Y4E1-3|WASHC2C;nc|ENSG00000172661|Q9Y4E1-4|WASHC2C;nc|ENSG00000172661|Q9Y4E1-5|WASHC2C;nc|ENSG00000172661|Q9Y4E1-6|WASHC2C	112.41091882917199	0.026537921851008135	2				NaN	NaN	0	NaN	10132	4102	14233
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14237	37.537	NaN	4642.3	30	0	1685.3	0.106				-1	 	0	58	359.20347794232475	1074.5886044271742	3	359.2037658691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10133	4102	14233
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14238	37.539	NaN	3804.5	30	0	876.82	0.106				-1	YAFFECKR	8	49	374.17967441869223	1119.5171938562767	3	374.17962646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_YAFFEC(Carbamidomethyl (C))KR_	ENSG00000183513|ENST00000328709|COA5;ENST00000466848.1_1_2:99217217-99222254:-|nuORF;ENST00000483527.5_1_2:99217217-99224734:-|nuORF	19.359975847455235	0.7988239741663654	2				NaN	NaN	0	NaN	10134	4102	14233
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14239	37.541	NaN	2768.5	30	0	466.33	0.106			+	18228	INLVKQLDP	9	66	520.310749288546	NaN	0	520.3109130859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_INLVKQLDP_	REV__ENSG00000126947|ENST00000372829|ARMCX1	44.116797842482775	0.2472372736944149	2				NaN	NaN	0	NaN	10135	4102	14233
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14240	37.542	NaN	2248.4	30	0	344.83	0.033	+			20014	KEILDTAL	8	64	451.763463813876	NaN	0	451.763671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KEILDTAL_	ENSG00000100596|ENST00000216484|SPTLC2	71.87747018426188	1.7418937515398478	2				NaN	NaN	0	NaN	10136	4102	14233
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14251	37.568	NaN	6675.4	30	0	968.17	0.214	+			12908	GESGIKVAVL	10	62	486.7900484804592	971.5655440277184	2	486.7893981933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GESGIKVAVL_	ENSG00000164091|ENST00000296490|WDR82;ENST00000487402.1_1_3:52291508-52301068:-|nuORF	53.08895987439943	0.42869529153390606	2				NaN	NaN	0	NaN	10144	4105	14250
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14252	37.571	NaN	3195.8	30	0	297.77	0.106	+			24805	LILTPTREL	9	63	528.3267970259668	1054.6390411187335	2	528.3269653320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LILTPTREL_	ENSG00000118197|ENST00000331314|DDX59;nc|ENSG00000118197|Q5T1V6-2|DDX59	51.19269402634007	0.2889735674168909	2				NaN	NaN	0	NaN	10145	4105	14250
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14253	37.573	NaN	2613.9	30	0	362.82	0.106			+	-1	CAAAGWGW	8	55	439.68475810591065	877.3549632786213	2	439.6844177246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_C(Carbamidomethyl (C))AAAGWGW_	REV__nc|ENSG00000172478|Q08AI8-2|MAB21L4	24.504012794735996	0.7701314986472447	2				NaN	NaN	0	NaN	10146	4105	14250
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14254	37.575	NaN	6113.7	30	0	758.15	0.106				-1	RPTEMGLDL	9	73	524.2596228818929	1046.5046928305858	2	524.259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_RPTEM(Oxidation (M))GLDL_	ENSG00000154760|ENST00000285013|SLFN13	49.44154591367651	0.3095138337212152	2				NaN	NaN	0	NaN	10147	4105	14250
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14255	37.577	NaN	2190.5	30	0	220.7	0.106	+			51402	YTNWAIGLSV	10	71	562.2947387695312	NaN	0	562.2947387695312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YTNWAIGLSV_	ENSG00000111716|ENST00000350669|LDHB;ENST00000542765.4_1_12:21788478-21790169:-|nuORF	36.446750945000026	0.3805027428805705	2				NaN	NaN	0	NaN	10148	4105	14250
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14256	37.579	NaN	2523.5	30	0	484.95	0.034				-1	 	0	60	484.31309145670144	483.30581499010145	1	484.2826843261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10149	4105	14250
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14269	37.606	NaN	25084	30	0	5256	0.214	+			34842	RYPTSIASL	9	71	504.27946390635276	1006.5443748795055	2	504.2793884277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RYPTSIASL_	ENSG00000154473|ENST00000368865|BUB3;ENST00000481952.1_1_10:124921781-124922345:+|nuORF;nc|ENSG00000154473|O43684-2|BUB3	70.8162118820467	0.13725933411854815	2				NaN	NaN	0	NaN	10159	4108	14268
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14270	37.609	NaN	18681	30	0	3438.5	0.106	+			20206	KELGITAL	8	74	422.76078489010985	843.5070168470197	2	422.7603454589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KELGITAL_	ENSG00000164587|ENST00000407193|RPS14	113.41158876095287	0.24327961457765637	2				NaN	NaN	0	NaN	10160	4108	14268
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14271	37.611	NaN	7248.4	30	0	1023.8	0.106	+			41589	SVQGIIIYR	9	64	524.8112365530179	1047.6079201728357	2	524.8116455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVQGIIIYR_	ENSG00000005022|ENST00000317881|SLC25A5;ENSG00000151729|ENST00000281456|SLC25A4;ENSG00000169100|ENST00000381401|SLC25A6;ENST00000406156.2_1_6:121975405-121975696:+|nuORF;ENST00000435239.1_1_7:32511604-32512018:+|nuORF	96.0336014099291	0.047854655524928534	2				NaN	NaN	0	NaN	10161	4108	14268
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14272	37.613	NaN	7453.2	30	0	839.86	0.106	+			14018	GSFVSSLVK	9	68	462.2631529514692	NaN	0	462.2633056640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GSFVSSLVK_	ENSG00000172016|ENST00000305165|REG3A	51.19269402634007	0.19847346126499396	2				NaN	NaN	0	NaN	10162	4108	14268
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14273	37.615	NaN	4983.1	30	0	693.64	0.106	+			9407	EKGLPTPQVL	10	67	541.316281332487	1080.618009731774	2	541.3162231445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EKGLPTPQVL_	ENSG00000079277|ENST00000371945|MKNK1;nc|ENSG00000079277|Q9BUB5-2|MKNK1;nc|ENSG00000079277|Q9BUB5|MKNK1	37.50817390946774	0.5721060100277453	2				NaN	NaN	0	NaN	10163	4108	14268
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14274	37.617	NaN	3926.1	30	0	751.52	0.035	+			15071	GTPLLVIANK	10	62	513.3213469249649	1024.6281409167298	2	513.3209228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTPLLVIANK_	ENSG00000188042|ENST00000339728|ARL4C;nc|ENSG00000188042|P56559|ARL4C	60.11826168202944	0.36476464221954025	2				NaN	NaN	0	NaN	10164	4108	14268
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14275	37.617	NaN	5074.6	30	0	553.73	0.143				-1	LAIDMDEIEK	10	69	596.7917458966634	1191.5689388601268	2	596.7929077148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_LAIDM(Oxidation (M))DEIEK_	ENSG00000266338|ENST00000581897|NBPF15;ENSG00000271383|ENST00000651566|NBPF19;ENSG00000271383|ENST00000651566|NBPF19;ENSG00000271425|ENST00000583866|NBPF10;NBPF10|p.D878Kfs*17|1|0.38|ENSG00000271425|chr1:146121624-146121625|-/TT|frameshift_variant;NBPF10|p.Q877Lfs*19|1|0.38|ENSG00000271425|chr1:146121626-146121627|-/GGTTA|frameshift_variant	25.57405402267927	0.6709832231498071	2				NaN	NaN	0	NaN	10165	4108	14268
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14285	37.642	NaN	5061.2	30	0	1078.9	0.214				-1	 	0	46	336.5340881535948	1006.5804350609844	3	336.5343017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10172	4111	14284
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14286	37.646	NaN	4869.4	30	0	358.94	0.106	+			9709	EMKDVTTKL	9	75	532.7876416371082	NaN	0	532.7869873046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EMKDVTTKL_	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42|TTN;TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant	80.45461616416974	0.0698259577396595	2				NaN	NaN	0	NaN	10173	4111	14284
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14287	37.648	NaN	4281.5	30	0	409.64	0.106	+			22837	KVHNYCNMKK	10	76	632.8188337457467	1263.6231145582933	2	632.8196411132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KVHNYCNMKK_	ENST00000395900.1_1_11:32460427-32460703:+|nuORF;nc|ENSG00000183242|Q06250|WT1-AS	33.921630207806714	0.6028135429846169	2				NaN	NaN	0	NaN	10174	4111	14284
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14288	37.65	NaN	2097.3	30	0	195	0.106	+			46567	VFLDHNAL	8	61	464.74789948291726	927.4812460326345	2	464.7471008300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VFLDHNAL_	ENSG00000160255|ENST00000652462|ITGB2;ENST00000475170.5_1_21:46306285-46313576:-|nuORF;ENST00000498666.5_1_21:46313282-46313576:-|nuORF	45.9519527083369	0.6193794311207887	2				NaN	NaN	0	NaN	10175	4111	14284
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14289	37.652	NaN	1741.1	30	0	430.26	0.106			+	17969	IGVSGGGKGLR	11	42	334.2012472229404	NaN	0	334.20135498046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IGVSGGGKGLR_	REV__ENST00000552478.5_1_12:56345656-56345980:+|nuORF	29.550750289552195	0.43372083775723597	2				NaN	NaN	0	NaN	10176	4111	14284
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14290	37.653	NaN	3182	30	0	410.13	0.106	+			28640	NLEKFLIN	8	65	495.78447936032967	989.5544057874594	2	495.7833557128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NLEKFLIN_	tr|U7STL4|U7STL4_FUSNUDUF452domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01103PE=4SV=1	51.52775601994872	0.5847804192265663	2				NaN	NaN	0	NaN	10177	4111	14284
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14291	37.655	NaN	4305.7	30	0	456.94	0.036	+			47822	VSKLSISHEI	10	79	556.8192770762496	1111.624001219299	2	556.8193969726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VSKLSISHEI_	ENSG00000215029|ENST00000642911|TCP11X2;ENSG00000268235|ENST00000622971|TCP11X1;nc|ENSG00000268235|B4DZS4-2|TCP11X1	45.97224482568171	0.49411383603842696	2				NaN	NaN	0	NaN	10178	4111	14284
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14299	37.673	NaN	4845.6	30	0	500.1	0.214	+			23520	LAHMPLDK	8	62	462.7519401982127	923.4893274632254	2	462.7517395019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LAHMPLDK_	ENSG00000073910|ENST00000542859|FRY;FRY|p.F2418Vfs*11|1|0.14|ENSG00000073910|chr13:32254229-32254230|-/G|frameshift_variant	60.29395666154354	0.49887135096048313	2				NaN	NaN	0	NaN	10183	4114	14298
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14300	37.677	NaN	5688.4	30	0	410.9	0.106	+			41309	SVLNLVIVKK	10	73	556.8739681541805	1111.7333833751609	2	556.8740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVLNLVIVKK_	ENSG00000137154|ENST00000380394|RPS6;ENST00000464444.1_1_19:13005132-13005321:+|nuORF	128.3478880297481	0.01553957493207534	2				NaN	NaN	0	NaN	10184	4114	14298
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14301	37.679	NaN	1447.5	30	0	174.1	0.106			+	48992	VVGLGSVAL	9	49	407.75573769268897	813.496922452178	2	407.7554626464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVGLGSVAL_	REV__ENSG00000131747|ENST00000423485|TOP2A;REV__nc|ENSG00000131747|P11388-2|TOP2A;REV__nc|ENSG00000131747|P11388-3|TOP2A;REV__nc|ENSG00000131747|P11388-4|TOP2A;REV__TOP2A|p.K1199Efs*11|1|0.23|ENSG00000131747|chr17:40396408-40396409|-/C|frameshift_variant;REV__TOP2A|p.T1205Hfs*19|4|0.35|ENSG00000131747|chr17:40396390-40396390|T/-|frameshift_variant	57.81127852772723	0.2318599694398087	2				NaN	NaN	0	NaN	10185	4114	14298
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14302	37.681	NaN	3359.5	30	0	294.84	0.106	+			17030	HPVPQPLQSF	10	62	575.3064152015907	1148.5982774699812	2	575.3060302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HPVPQPLQSF_	ENSG00000204103|ENST00000373313|MAFB;MAFB|p.D125N|1|0.29|ENSG00000204103|chr20:40688478-40688478|C/T|missense_variant	70.8162118820467	0.27065172005956	2				NaN	NaN	0	NaN	10186	4114	14298
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14303	37.683	NaN	5884.2	30	0	473.06	0.106	+			28223	NAVNLAIKY	9	73	503.2898390752189	1004.5651252172378	2	503.2900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NAVNLAIKY_	ENSG00000198554|ENST00000360586|WDHD1;nc|ENSG00000198554|O75717-2|WDHD1	74.25504064058377	0.12238981753128622	2				NaN	NaN	0	NaN	10187	4114	14298
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14304	37.684	NaN	5268.5	30	0	796.89	0.106				-1	LQMCEPYFL	9	76	608.7714477209454	1215.5283425086907	2	609.2721557617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),Oxidation (M)	_LQM(Oxidation (M))C(Carbamidomethyl (C))EPYFL_	ENSG00000188032|ENST00000548523|C19orf67	27.882242232435846	0.5426732730940306	2				NaN	NaN	0	NaN	10188	4114	14298
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14305	37.686	NaN	2361.9	30	0	289.64	0.034	+			46534	VFAKLHHN	8	63	483.26850381820157	NaN	0	483.2686462402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VFAKLHHN_	ENSG00000131142|ENST00000315626|CCL25;nc|ENSG00000131142|O15444-3|CCL25	28.2542754592877	1.7418937515398478	2				NaN	NaN	0	NaN	10189	4114	14298
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14315	37.709	NaN	10032	30	0	1171.6	0.214			+	33983	RSFQLVSL	8	71	475.27686011462595	948.5391672960519	2	475.2767028808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RSFQLVSL_	REV__ENST00000470379.1_1_1:167400920-167408655:-|nuORF;REV__ENST00000476733.5_1_1:167400920-167408655:-|nuORF	64.20726635412375	0.4601301477144759	2				NaN	NaN	0	NaN	10196	4117	14314
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14316	37.713	NaN	9111.4	30	0	2108.6	0.106	+			32638	QYVDFHNQL	9	73	582.2776683747327	1162.5407838162653	2	582.2778930664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QYVDFHNQL_	ENSG00000134899|ENST00000652225|ERCC5;nc|ENSG00000134899|P28715-2|ERCC5	82.24051045832904	0.08786059719216216	2				NaN	NaN	0	NaN	10197	4117	14314
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14317	37.715	NaN	5072.3	30	0	1619.2	0.106			+	48429	VTKEKAAKP	9	69	486.29742182462786	970.5802907160557	2	486.2974548339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTKEKAAKP_	REV__ENSG00000131711|ENST00000296755|MAP1B;REV__MAP1B|p.E2165Gfs*3|1|0.32|ENSG00000131711|chr5:72199841-72199842|-/C|frameshift_variant;REV__MAP1B|p.E871Afs*22|1|0.13|ENSG00000131711|chr5:72195965-72195966|TG/-|frameshift_variant;REV__MAP1B|p.P1789Hfs*34|1|0.31|ENSG00000131711|chr5:72198718-72198718|C/-|frameshift_variant;REV__MAP1B|p.P752Tfs*35|2|0.37|ENSG00000131711|chr5:72195601-72195602|-/A|frameshift_variant;REV__MAP1B|p.Y2023Afs*214|1|0.03|ENSG00000131711|chr5:72199421-72199422|-/GC|frameshift_variant	66.42927471994793	0.16001998865088202	2				NaN	NaN	0	NaN	10198	4117	14314
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14318	37.717	NaN	5243.8	30	0	698.9	0.106	+			48049	VSSDVKQTF	9	72	505.7611129326723	1009.5076729321446	2	505.76055908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSSDVKQTF_	ENST00000380289.2_1_X:16170776-16171058:+|nuORF	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	10199	4117	14314
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14319	37.719	NaN	3306.9	30	0	445.51	0.106				-1	 	0	45	339.21504247316415	676.4155320131283	2	339.215087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10200	4117	14314
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14320	37.72	NaN	3925.8	30	0	472.09	0.106	+			36428	SETTVKYVF	9	66	537.279093979949	1072.543635026698	2	537.2789916992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SETTVKYVF_	ENSG00000135862|ENST00000258341|LAMC1;LAMC1|p.T1225Kfs*5|1|0.07|ENSG00000135862|chr1:183132506-183132507|-/AAAT|frameshift_variant	76.7741389293348	0.11149722112137898	2				NaN	NaN	0	NaN	10201	4117	14314
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14321	37.722	NaN	2970.5	30	0	527.46	0.035			+	25258	LNLNPQLDD	9	58	521.2659214954359	1040.5172900576717	2	521.2654418945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LNLNPQLDD_	REV__ENSG00000183020|ENST00000448903|AP2A2;REV__nc|ENSG00000183020|O94973-2|AP2A2	45.9519527083369	0.35044536499095585	2				NaN	NaN	0	NaN	10202	4117	14314
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14329	37.74	NaN	4218.3	30	0	438.12	0.214	+			29575	PFHTSTEMF	9	71	548.7421512702622	1095.4697496073243	2	548.7424926757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PFHTSTEMF_	DHRS3|p.G229D|1|0.1|ENSG00000162496|chr1:12578730-12578730|C/T|missense_variant;ENSG00000162496|ENST00000616661|DHRS3	76.84663266511073	0.11118375776443899	2				NaN	NaN	0	NaN	10207	4120	14328
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14330	37.744	NaN	3982.2	30	0	459.14	0.106	+			27283	MGDPKVHEF	9	61	530.2501616679375	1058.485770402675	2	530.2509155273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MGDPKVHEF_	ATP8B4|p.R469M|1|0.23|ENSG00000104043|chr15:49934064-49934064|C/A|missense_variant;ENSG00000104043|ENST00000284509|ATP8B4;ENST00000558906.5_1_15:50152393-50311102:-|nuORF;ENST00000559726.5_1_15:50152393-50311102:-|nuORF	58.78195531508484	0.22376836668196862	2				NaN	NaN	0	NaN	10208	4120	14328
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14331	37.746	NaN	2271.8	30	0	284.33	0.106	+			5744	AVGCTVVALV	10	54	466.2675684279917	930.5205839227834	2	466.2677001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVGCTVVALV_	ALDH16A1|p.A347Gfs*5|1|0.36|ENSG00000161618|chr19:49462690-49462691|-/G|frameshift_variant;ALDH16A1|p.A347Lfs*155|1|0.37|ENSG00000161618|chr19:49462691-49462691|G/-|frameshift_variant;ALDH16A1|p.F409Sfs*93|1|0.42|ENSG00000161618|chr19:49464152-49464152|C/-|frameshift_variant;ALDH16A1|p.Y528Mfs*99|1|0.33|ENSG00000161618|chr19:49465745-49465745|C/-|frameshift_variant;ENSG00000161618|ENST00000293350|ALDH16A1;ENST00000599652.5_1_19:49956588-49965222:+|nuORF;nc|ENSG00000161618|Q8IZ83-2|ALDH16A1;nc|ENSG00000161618|Q8IZ83-3|ALDH16A1	45.9519527083369	0.4943008177357963	2				NaN	NaN	0	NaN	10209	4120	14328
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14332	37.748	NaN	3188.6	30	0	527.2	0.106			+	25038	LLHRCAQGK	9	66	513.2866613840936	1024.558769834987	2	513.2864379882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LLHRCAQGK_	REV__ENSG00000070731|ENST00000225276|ST6GALNAC2;REV__ST6GALNAC2|p.F297Lfs*15|1|0.29|ENSG00000070731|chr17:76567519-76567519|A/-|frameshift_variant	40.5726180659479	0.4135428067754104	2				NaN	NaN	0	NaN	10210	4120	14328
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14333	37.75	NaN	2813	30	0	407.23	0.106			+	18209	IMVSQNNVL	9	68	509.27226107646896	NaN	0	509.27227783203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IMVSQNNVL_	REV__ANGPTL1|p.W318Lfs*22|1|0.15|ENSG00000116194|chr1:178853660-178853661|-/C|frameshift_variant;REV__ENSG00000116194|ENST00000234816|ANGPTL1	45.97224482568171	0.23445038899310136	2				NaN	NaN	0	NaN	10211	4120	14328
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14334	37.751	NaN	3107.7	30	0	517.42	0.106	+			36610	SGEVPAVEETV	11	73	558.7747922775344	1115.5350316218687	2	559.2761840820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SGEVPAVEETV_	ENSG00000120889|ENST00000276431|TNFRSF10B	24.519189625965996	0.7326048944360514	2				NaN	NaN	0	NaN	10212	4120	14328
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14335	37.753	NaN	2649.2	30	0	218.6	0.035				-1	ADLIMTLML	9	68	518.7744157720543	1035.5342786109086	2	518.774169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_ADLIMTLM(Oxidation (M))L_	ENSG00000181631|ENST00000325602|P2RY13;nc|ENSG00000181631|Q9BPV8-2|P2RY13;P2RY13|p.V235Yfs*81|3|0.39|ENSG00000181631|chr3:151328354-151328354|T/-|frameshift_variant	38.80614096846853	0.43426287593479557	2				NaN	NaN	0	NaN	10213	4120	14328
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14342	37.771	NaN	4056.7	30	0	1133	0.214				-1	 	0	59	359.20347794232475	1074.5886044271742	3	359.2035217285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10217	4123	14341
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14343	37.775	NaN	2748.8	30	0	374	0.036	+			8048	DVATSPISPTE	11	65	558.7747922775344	1115.5350316218687	2	559.2757568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DVATSPISPTE_	ENSG00000149269|ENST00000356341|PAK1;ENST00000526103.1_1_11:77064519-77066893:-|nuORF;nc|ENSG00000149269|Q13153-2|PAK1	25.57405402267927	0.7215402271931856	2				NaN	NaN	0	NaN	10218	4123	14341
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14352	37.795	NaN	8901.2	30	0	1542.9	0.214	+			23238	KYIEGVSDF	9	75	529.2641384978248	1056.5137240624495	2	529.2642822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KYIEGVSDF_	ENSG00000197429|ENST00000396478|IPP;nc|ENSG00000197429|Q9Y573-2|IPP	56.43379154798735	0.2433427591689151	2				NaN	NaN	0	NaN	10224	4126	14351
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14353	37.798	NaN	6569.6	30	0	536.48	0.106	+			6161	AVQGISGLPLK	11	73	541.8323090969822	1081.6500652607642	2	541.8326416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVQGISGLPLK_	ENSG00000167721|ENST00000301364|TSR1	68.46348319611178	0.24854916601543572	2				NaN	NaN	0	NaN	10225	4126	14351
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14354	37.8	NaN	3704.4	30	0	440.02	0.106			+	24295	LFCGICVQFV	10	67	564.7825534495498	1127.5505539658996	2	564.7823486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LFCGICVQFV_	REV__ENSG00000105675|ENST00000262623|ATP4A	29.14955571784316	0.6417842315402807	2				NaN	NaN	0	NaN	10226	4126	14351
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14355	37.802	NaN	3914.7	30	0	489.66	0.037	+			49572	VYDTVFKHF	9	72	578.2958827262084	1154.5772125192168	2	578.2960815429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VYDTVFKHF_	ENSG00000185404|ENST00000415673|SP140L;nc|ENSG00000185404|Q9H930-1|SP140L;nc|ENSG00000185404|Q9H930-2|SP140L;SP140L|p.F492Lfs*17|1|0.46|ENSG00000185404|chr2:230401414-230401414|T/-|frameshift_variant;SP140L|p.M88Nfs*3|1|0.34|ENSG00000185404|chr2:230357955-230357956|-/A|frameshift_variant	63.30626980617807	0.18605348971131092	2				NaN	NaN	0	NaN	10227	4126	14351
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14363	37.822	NaN	49506	30	0	6324.7	0.193	+			49953	VYVVGTAHF	9	82	496.7639065162064	991.5132600992129	2	496.7634582519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYVVGTAHF_	ENSG00000170638|ENST00000380909|TRABD;ENST00000463233.1_1_22:50624392-50636456:+|nuORF;nc|ENSG00000170638|Q9H4I3-2|TRABD	148.20599733432147	0.007287282186870133	2				NaN	NaN	0	NaN	10232	4129	14362
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14364	37.825	NaN	1472.5	30	0	119.05	0.106	+			27807	MSGSPMKR	8	52	447.2217937742864	892.4290346153729	2	447.2221374511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MSGSPMKR_	ENST00000367240.6_1_1:203029522-203032974:+|nuORF	53.351449002276354	0.5676011784961348	2				NaN	NaN	0	NaN	10233	4129	14362
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14365	37.827	NaN	1986.3	30	0	238.84	0.106				-1	EYLGGKPLCM	10	59	592.2796732139589	1182.5447934947176	2	592.2803955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_EYLGGKPLC(Carbamidomethyl (C))M(Oxidation (M))_	ENSG00000095321|ENST00000318080|CRAT;nc|ENSG00000095321|P43155-2|CRAT;nc|ENSG00000095321|P43155-3|CRAT	34.172542307311794	0.6007644933930345	2				NaN	NaN	0	NaN	10234	4129	14362
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14366	37.829	NaN	2250.8	30	0	793.41	0.106			+	37878	SNVLILVGT	9	49	458.27862801932366	914.5427031054473	2	458.2790222167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SNVLILVGT_	REV__ENSG00000183742|ENST00000400331|MACC1	38.80614096846853	0.43426287593479557	2				NaN	NaN	0	NaN	10235	4129	14362
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14367	37.831	NaN	2667.7	30	0	334.7	0.037				-1	VCLFHFRY	8	65	571.2847290039062	NaN	0	571.2847290039062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_VC(Carbamidomethyl (C))LFHFRY_	ENSG00000147251|ENST00000276202|DOCK11;ENST00000553480.1_1_14:45331723-45332152:-|nuORF	46.76643321282427	1.7418937515398478	2				NaN	NaN	0	NaN	10236	4129	14362
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14376	37.852	NaN	11008	30	0	2755.2	0.214	+			23905	LDKRLLPE	8	66	492.29802644325565	982.5814999533113	2	492.29766845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LDKRLLPE_	chr17:58415759-58417017|443|15.45|0.8|4.27|-|ENST00000577716|RNF43,RNF43;ENSG00000108375|ENST00000407977|RNF43;nc|ENSG00000108375|Q68DV7-2|RNF43;nc|ENSG00000108375|Q68DV7-3|RNF43;nc|ENSG00000108375|Q68DV7-4|RNF43	84.9155231211612	0.2928622555056503	2				NaN	NaN	0	NaN	10242	4132	14375
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14377	37.856	NaN	6937.8	30	0	1944.6	0.106			+	23908	LDLEEKAHL	9	74	534.2905355690914	1066.5665182049827	2	534.2904052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LDLEEKAHL_	REV__ENSG00000136002|ENST00000409359|ARHGEF4	47.657333605630114	0.33044192980041115	2				NaN	NaN	0	NaN	10243	4132	14375
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14378	37.858	NaN	3693.6	30	0	480.7	0.106	+			12991	GEVCIKGTNVF	11	67	612.3086416016215	1222.602730270043	2	612.3076782226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_GEVC(Carbamidomethyl (C))IKGTNVF_	ENSG00000197142|ENST00000354655|ACSL5;ENST00000496328.1_1_10:114181742-114186129:+|nuORF;nc|ENSG00000197142|Q9ULC5-3|ACSL5;nc|ENSG00000197142|Q9ULC5-4|ACSL5	65.2775769800794	0.27634548443598095	2				NaN	NaN	0	NaN	10244	4132	14375
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14379	37.86	NaN	3983.6	30	0	349.06	0.106	+			25400	LPKNDLITY	9	73	538.8025573631166	NaN	0	538.8034057617188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LPKNDLITY_	ENSG00000092148|ENST00000399332|HECTD1;HECTD1|p.F2271Lfs*13|1|0.16|ENSG00000092148|chr14:31107059-31107059|A/-|frameshift_variant;HECTD1|p.I2041Lfs*27|1|0.36|ENSG00000092148|chr14:31113133-31113133|T/-|frameshift_variant	52.936696900407355	0.1864545979552969	2				NaN	NaN	0	NaN	10245	4132	14375
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14380	37.862	NaN	2220.2	30	0	253.1	0.106				-1	 	0	59	474.23144181800336	473.22416535140337	1	474.2305908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10246	4132	14375
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14381	37.863	NaN	3225.7	30	0	842.26	0.106			+	6524	AYDGNLHTIT	10	55	368.84796999236926	NaN	0	368.8479919433594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AYDGNLHTIT_	REV__CDH4|p.R666H|1|0.12|ENSG00000179242|chr20:61928415-61928415|G/A|missense_variant	27.047317107675042	0.41136583337917604	2				NaN	NaN	0	NaN	10247	4132	14375
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14382	37.865	NaN	2563.4	30	0	257.09	0.037			+	24575	LGNRQDFAPI	10	66	565.8032733044471	1129.591993675694	2	565.8037719726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LGNRQDFAPI_	REV__ENSG00000198589|ENST00000651943|LRBA;REV__LRBA|p.L2590*|1|0.41|ENSG00000198589|chr4:150310342-150310342|A/-|frameshift_variant;REV__LRBA|p.T2011Qfs*11|1|0.19|ENSG00000198589|chr4:150599022-150599022|T/-|frameshift_variant;REV__nc|ENSG00000198589|P50851-2|LRBA;REV__nc|ENSG00000198589|P50851|LRBA	32.81241826257853	0.6118718159329168	2				NaN	NaN	0	NaN	10248	4132	14375
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14391	37.887	NaN	4104.1	30	0	447.29	0.214	+			50728	YEIHDGMNL	9	69	546.244873046875	NaN	0	546.244873046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YEIHDGMNL_	ENSG00000198258|ENST00000586895|UBL5	77.31757898189308	0.08057531075035683	2				NaN	NaN	0	NaN	10254	4135	14390
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14392	37.89	NaN	3360.2	30	0	382.39	0.106			+	21083	KKNIDLEKI	9	76	550.8375244140625	NaN	0	550.8375244140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KKNIDLEKI_	REV__tr|U7T6T8|U7T6T8_FUSNUThree-Cys-motifpartnerproteinTcmPOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00005PE=4SV=1	70.8162118820467	0.10318768208603292	2				NaN	NaN	0	NaN	10255	4135	14390
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14393	37.892	NaN	1371.6	30	0	175.16	0.106			+	28736	NNSLGLSAL	9	52	444.7419917295252	887.4694305258504	2	444.74249267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NNSLGLSAL_	REV__ENSG00000099769|ENST00000215539|IGFALS;REV__nc|ENSG00000099769|P35858-2|IGFALS	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	10256	4135	14390
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14394	37.894	NaN	3832.5	30	0	1030	0.106			+	-1	PHRCDPEPI	9	54	374.1793212890625	NaN	0	374.1793212890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_PHRC(Carbamidomethyl (C))DPEPI_	REV__INTS1|p.Q467Afs*140|1|0.05|ENSG00000164880|chr7:1498439-1498440|-/A|frameshift_variant	20.94693142431847	0.3660861156085067	2				NaN	NaN	0	NaN	10257	4135	14390
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14395	37.896	NaN	2095	30	0	336.43	0.106	+			7082	CVPGASFYIGL	11	67	563.7848510742188	NaN	0	563.7848510742188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_CVPGASFYIGL_	ENST00000458502.2_1_17:20744565-20744838:+|nuORF	42.396135135203025	0.3699325281549567	2				NaN	NaN	0	NaN	10258	4135	14390
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14396	37.898	NaN	1161.6	30	0	124.58	0.106	+			26410	LTENPQVA	8	58	436.2296142578125	NaN	0	436.2296142578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LTENPQVA_	ENSG00000158423|ENST00000375327|RIBC1;nc|ENSG00000158423|Q8N443-3|RIBC1	37.15910966729921	1.7418937515398478	2				NaN	NaN	0	NaN	10259	4135	14390
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14397	37.9	NaN	1228.8	30	0	214.74	0.033			+	41509	SVPPPQVL	8	46	418.747314453125	NaN	0	418.747314453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVPPPQVL_	REV__ENSG00000213676|ENST00000375203|ATF6B;REV__nc|ENSG00000213676|Q99941-2|ATF6B	25.450171626174864	1.7418937515398478	2				NaN	NaN	0	NaN	10260	4135	14390
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14426	37.988	NaN	21727	30	0	2832.4	0.141	+			12144	GAIIHTVAL	9	73	447.7741351250322	893.5337173168645	2	448.27545166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GAIIHTVAL_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	123.9887779854562	0.018785054595953452	2				NaN	NaN	0	NaN	10274	4150	14425
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14444	38.035	NaN	8401.3	30	0	3286.4	0.143	+			26762	LVPTRELAL	9	61	506.3139828359184	NaN	0	506.31414794921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LVPTRELAL_	ENSG00000125485|ENST00000372159|DDX31;nc|ENSG00000125485|Q9H8H2-2|DDX31;nc|ENSG00000125485|Q9H8H2-4|DDX31;nc|ENSG00000125485|Q9H8H2|DDX31	54.722347961057174	0.17414871455573902	2				NaN	NaN	0	NaN	10286	4156	14443
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14459	38.076	NaN	6246.1	30	0	1284.1	0.143			+	14411	GTAPLVILSH	10	57	336.53386506618676	NaN	0	336.53387451171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTAPLVILSH_	REV__ENST00000444374.1_1_9:92316696-92316852:+|nuORF	20.94693142431847	0.4201028297492154	2				NaN	NaN	0	NaN	10295	4162	14458
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14469	38.102	NaN	14169	30	0	2111	0.214	+			51440	YVDPVNKVL	9	67	523.7977474897808	1045.5809420463615	2	523.7979125976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YVDPVNKVL_	ENSG00000140992|ENST00000342085|PDPK1;nc|ENSG00000140992|O15530-2|PDPK1;nc|ENSG00000140992|O15530-3|PDPK1;nc|ENSG00000140992|O15530-4|PDPK1	85.16082228582465	0.07850854922700509	2				NaN	NaN	0	NaN	10302	4165	14468
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14470	38.105	NaN	18078	30	0	1231.9	0.036	+			166	AAIVAYGLYK	10	76	534.8081523960971	1067.601751858994	2	535.3093872070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAIVAYGLYK_	ENSG00000181061|ENST00000321331|HIGD1A;ENST00000470543.1_1_3:42826765-42845976:-|nuORF;nc|ENSG00000181061|Q9Y241-2|HIGD1A	68.78682469695295	0.28723163847957256	2				NaN	NaN	0	NaN	10303	4165	14468
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14488	38.16	NaN	5010.7	30	0	856.03	0.214	+			22453	KTLFFGLCK	9	63	557.310242116376	NaN	0	557.310791015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_KTLFFGLC(Carbamidomethyl (C))K_	ENST00000298139.5_1_8:30891382-30915948:+|nuORF	80.45461616416974	0.0698259577396595	2				NaN	NaN	0	NaN	10312	4174	14487
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14489	38.164	NaN	6742.9	30	0	1189.6	0.035			+	51490	YVKLQLTQ	8	69	496.791977971104	991.569403009008	2	496.7925720214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YVKLQLTQ_	REV__ENSG00000158714|ENST00000289707|SLAMF8	56.72105179125745	0.5342425954139568	2				NaN	NaN	0	NaN	10313	4174	14487
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14500	38.189	NaN	5614.3	30	0	522.81	0.213	+			49807	VYSRYFTTY	9	73	600.2906849137983	1198.5668168943964	2	600.2907104492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	124.08010499294276	0.018729767491916592	2				NaN	NaN	0	NaN	10321	4177	14499
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14501	38.192	NaN	3937.5	30	0	820.34	0.106	+			4202	ATFTNVFGK	9	70	492.76093152444577	NaN	0	492.7611999511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATFTNVFGK_	ENSG00000131503|ENST00000360839|ANKHD1;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	42.86426827375447	0.2558691296974908	2				NaN	NaN	0	NaN	10322	4177	14499
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14502	38.194	NaN	3675.9	30	0	508.95	0.106			+	-1	ADGSLVTWLC	10	70	561.2672478801725	1120.5199428271449	2	561.267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_ADGSLVTWLC(Carbamidomethyl (C))_	REV__ENST00000397030.5_1_13:113751205-113751547:+|nuORF	40.77816245573522	0.5419747034533848	2				NaN	NaN	0	NaN	10323	4177	14499
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14503	38.196	NaN	4449.9	30	0	307.53	0.106	+			26096	LSNHVFNAL	9	75	507.77247214587635	1013.5303913585527	2	507.7724914550781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSNHVFNAL_	ENSG00000101782|ENST00000339486|RIOK3;ENST00000581302.5_1_18:21033283-21057068:+|nuORF;ENST00000584992.1_1_18:21044583-21047491:+|nuORF;nc|ENSG00000101782|O14730-2|RIOK3;RIOK3|p.L482*|1|0.4|ENSG00000101782|chr18:23479412-23479412|T/-|frameshift_variant	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	10324	4177	14499
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14504	38.198	NaN	2494.2	30	0	291.58	0.106	+			10081	ESITVVKL	8	62	444.7737654186014	887.5329779040028	2	444.77294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ESITVVKL_	ENSG00000196663|ENST00000359520|TECPR2;ENST00000561228.1_1_14:102843052-102891354:+|nuORF;nc|ENSG00000196663|O15040-2|TECPR2	56.72105179125745	0.5342425954139568	2				NaN	NaN	0	NaN	10325	4177	14499
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14505	38.2	NaN	4671.2	30	0	276.39	0.037	+			5866	AVIQVSQIVAR	11	68	592.361808896251	1182.7090648593019	2	592.3614501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AVIQVSQIVAR_	ENSG00000169738|ENST00000306869|DCXR;ENST00000578885.5_1_17:79994327-79995552:-|nuORF;ENST00000582074.5_1_17:79994229-79994802:-|nuORF	61.76455937419982	0.30770400073182314	2				NaN	NaN	0	NaN	10326	4177	14499
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14512	38.216	NaN	3462.5	30	0	384.25	0.214	+			46873	VILLPQPPK	9	78	502.8286634414359	1003.6427739496718	2	502.82830810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VILLPQPPK_	AluSp_dup12528|chr4:108625371-108625684:-|1.1205789574276814|0.0295741133308953|5.24|467.0|19|3|anti-sense;ENST00000499522.6_1_8:104178449-104258641:-|nuORF;ENST00000573538.5_2_16:67974380-67976796:-|nuORF;ENST00000602743.1_1_17:13801940-13972716:-|nuORF;nc|ENSG00000050628|P43115-12|PTGER3	55.50420428727701	0.2510918378945873	2				NaN	NaN	0	NaN	10330	4180	14511
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14513	38.219	NaN	3257.9	30	0	839.92	0.106	+			14450	GTAYGFFGK	9	63	474.2342382229926	NaN	0	474.2353210449219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTAYGFFGK_	ENST00000580048.1_1_18:72264114-72264453:-|nuORF	62.107414245175825	0.1403307765918332	2				NaN	NaN	0	NaN	10331	4180	14511
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14514	38.221	NaN	1920.9	30	0	510.7	0.106	+			26893	LWSLFVCL	8	51	490.7655899568471	NaN	0	490.76580810546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LWSLFVCL_	AluSx1_dup107630|chr19:41713933-41714240:+|1.182438838059655|0.1247445926159485|3.24|476.0|13|2|anti-sense	35.200714571348534	1.7418937515398478	2				NaN	NaN	0	NaN	10332	4180	14511
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14515	38.223	NaN	3285.9	30	0	896.23	0.033			+	35659	SDAAKFLI	8	56	432.7444669985874	NaN	0	432.7448425292969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SDAAKFLI_	REV__ENSG00000075539|ENST00000358350|FRYL;REV__FRYL|p.K2264Qfs*11|1|0.13|ENSG00000075539|chr4:48531269-48531270|-/G|frameshift_variant;REV__FRYL|p.P2464Efs*13|1|0.04|ENSG00000075539|chr4:48523032-48523033|-/TATACAATTC|frameshift_variant;REV__FRYL|p.S1220F|1|0.31|ENSG00000075539|chr4:48562926-48562926|G/A|missense_variant	45.9519527083369	1.7418937515398478	2				NaN	NaN	0	NaN	10333	4180	14511
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14523	38.241	NaN	5424.5	30	0	497.11	0.214	+			14301	GSYDPQQIFK	10	65	591.792753366019	1181.570953798838	2	591.7935180664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSYDPQQIFK_	ENSG00000131653|ENST00000326181|TRAF7;nc|ENSG00000131653|Q6Q0C0-2|TRAF7	91.26522074875469	0.12383023862516404	2				NaN	NaN	0	NaN	10338	4183	14522
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14524	38.244	NaN	5659.6	30	0	639.01	0.106	+			42974	TEKELYEAL	9	82	548.2827989856297	1094.5510450380593	2	548.2830810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEKELYEAL_	ENSG00000174607|ENST00000310836|UGT8	54.722347961057174	0.257609425301511	2				NaN	NaN	0	NaN	10339	4183	14522
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14525	38.246	NaN	3755.2	30	0	360.82	0.106	+			8787	EEIQRDILL	9	68	564.8159149320928	1127.6172769309856	2	564.8157958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EEIQRDILL_	ENSG00000111885|ENST00000368468|MAN1A1;MAN1A1|p.P173Rfs*30|1|0.43|ENSG00000111885|chr6:119348548-119348548|G/-|frameshift_variant;nc|ENSG00000111885|P33908-2|MAN1A1	54.776311868738084	0.25715957988447635	2				NaN	NaN	0	NaN	10340	4183	14522
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14526	38.248	NaN	6591.9	30	0	563.98	0.035	+			37265	SLAEILLKK	9	72	507.83146125964157	1013.6483695860832	2	507.83203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLAEILLKK_	ENSG00000133704|ENST00000256079|IPO8;ENSG00000205339|ENST00000379719|IPO7;IPO7|p.M511Cfs*3|1|0.19|ENSG00000205339|chr11:9429134-9429134|A/-|frameshift_variant;nc|ENSG00000133704|O15397-2|IPO8	107.00750918261382	0.032051501805654005	2				NaN	NaN	0	NaN	10341	4183	14522
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14537	38.273	NaN	3447.4	30	0	889.12	0.214			+	-1	AAGRGLSCPLC	11	53	368.8480461771354	1103.5223091316063	3	368.84820556640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_AAGRGLSC(Carbamidomethyl (C))PLC_	REV__ENSG00000126453|ENST00000246784|BCL2L12;REV__ENST00000508390.1_1_3:131245302-131245881:+|nuORF;REV__nc|ENSG00000126453|Q9HB09-3|BCL2L12	31.634271133179894	0.6579734920221648	2				NaN	NaN	0	NaN	10349	4186	14536
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14538	38.277	NaN	2641.9	30	0	304.3	0.034			+	37441	SLIAHSLSF	9	59	487.76880961765903	973.5230663021181	2	487.7684631347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLIAHSLSF_	REV__ENST00000372406.5_1_9:132898816-132898981:+|nuORF	47.657333605630114	0.33044192980041115	2				NaN	NaN	0	NaN	10350	4186	14536
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14543	38.291	NaN	5709.1	30	0	1067.4	0.214	+			8106	DYKESFNTI	9	71	558.7639678294377	1115.5133827256752	2	558.7640991210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DYKESFNTI_	ENSG00000083307|ENST00000646743|GRHL2;ENSG00000134317|ENST00000324907|GRHL1;nc|ENSG00000083307|Q6ISB3-2|GRHL2;nc|ENSG00000134317|Q9NZI5-2|GRHL1;nc|ENSG00000134317|Q9NZI5-3|GRHL1	89.02883481214508	0.06760336634167786	2				NaN	NaN	0	NaN	10352	4189	14542
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14544	38.295	NaN	3118.7	30	0	298.28	0.106	+			25404	LPKTCDISF	9	69	540.7746318368763	NaN	0	540.7741088867188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LPKTC(Carbamidomethyl (C))DISF_	ENSG00000130725|ENST00000253023|UBE2M;ENST00000593801.1_1_19:59068052-59068513:-|nuORF	90.60085204095205	0.040385177724871185	2				NaN	NaN	0	NaN	10353	4189	14542
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14545	38.297	NaN	3332.3	30	0	1754.1	0.106			+	50240	WPGLSDPE	8	55	450.70861008453727	899.4026672358746	2	450.707763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_WPGLSDPE_	REV__ENST00000360864.8_1_20:62563873-62564050:+|nuORF	28.2542754592877	0.7411748056684583	2				NaN	NaN	0	NaN	10354	4189	14542
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14546	38.299	NaN	3104.1	30	0	320.58	0.036	+			6030	AVMETLLQR	9	63	530.7936746699877	NaN	0	530.7938232421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVMETLLQR_	ENSG00000116017|ENST00000263620|ARID3A	96.0336014099291	0.029433397039169355	2				NaN	NaN	0	NaN	10355	4189	14542
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14553	38.316	NaN	5456.1	30	0	480.64	0.143	+			3253	ASLGGFLAQK	10	74	496.2817394490222	NaN	0	496.2815856933594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASLGGFLAQK_	ENSG00000090487|ENST00000204566|SPG21;nc|ENSG00000090487|Q9NZD8-2|SPG21;SPG21|p.I163*|1|0.31|ENSG00000090487|chr15:64970188-64970188|T/-|frameshift_variant;SPG21|p.I163Nfs*17|1|0.26|ENSG00000090487|chr15:64970187-64970188|-/T|frameshift_variant	106.68306549817024	0.010395786232963562	2				NaN	NaN	0	NaN	10359	4192	14552
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14562	38.338	NaN	2501.5	30	0	482.21	0.214				-1	GMCCALFL	8	67	457.70193507121485	NaN	0	457.7014465332031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GMC(Carbamidomethyl (C))CALFL_	ENSG00000137462|ENST00000642700|TLR2	24.504012794735996	1.7418937515398478	2				NaN	NaN	0	NaN	10365	4195	14561
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14563	38.341	NaN	3037.4	30	0	337.77	0.036				-1	FSPPPVGVVC	10	67	529.7692173809921	NaN	0	529.7703247070312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_FSPPPVGVVC(Carbamidomethyl (C))_	ENSG00000257093|ENST00000536163|DENND11	31.954861631926434	0.3952518850925832	2				NaN	NaN	0	NaN	10366	4195	14561
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14574	38.365	NaN	4181.5	30	0	578.48	0.215	+			49800	VYSNTIQSL	9	70	512.7694011090467	1023.5242492848935	2	512.7692260742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYSNTIQSL_	ENSG00000087258|ENST00000262493|GNAO1;nc|ENSG00000087258|P09471-2|GNAO1	131.03138772384656	0.014687601201650916	2				NaN	NaN	0	NaN	10374	4198	14573
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14575	38.368	NaN	4313.9	30	0	600.53	0.106	+			42555	TASDFITKM	9	66	507.2520419885678	1012.4895310439356	2	507.252197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TASDFITKM_	ENSG00000148180|ENST00000432226|GSN;ENST00000373807.5_1_9:124074589-124093809:+|nuORF;nc|ENSG00000148180|P06396-3|GSN;nc|ENSG00000148180|P06396-4|GSN;nc|ENSG00000148180|P06396|GSN	98.58198989935565	0.04066992115528678	2				NaN	NaN	0	NaN	10375	4198	14573
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14576	38.37	NaN	5059.3	30	0	619.92	0.106				-1	LMVCGVLIL	9	71	509.29473557398654	1016.5749182147731	2	509.29461669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LMVC(Carbamidomethyl (C))GVLIL_	ENSG00000062524|ENST00000263800|LTK;ENST00000563518.5_1_15:41799676-41805922:-|nuORF;LTK|p.D681Tfs*76|1|0.2|ENSG00000062524|chr15:41504852-41504852|C/-|frameshift_variant;nc|ENSG00000062524|P29376-4|LTK;nc|ENSG00000062524|P29376-5|LTK	49.21078951299608	0.3122205139198386	2				NaN	NaN	0	NaN	10376	4198	14573
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14577	38.372	NaN	3927.2	30	0	305.89	0.106				-1	VCLEAYLSF	9	75	551.2676971615457	1100.5208413898913	2	551.2675170898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_VC(Carbamidomethyl (C))LEAYLSF_	ENSG00000076344|ENST00000397770|RGS11;nc|ENSG00000076344|O94810-2|RGS11;nc|ENSG00000076344|O94810-3|RGS11	63.30626980617807	0.18605348971131092	2				NaN	NaN	0	NaN	10377	4198	14573
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14578	38.374	NaN	3325.9	30	0	343.69	0.036	+			51124	YNAQLSDRI	9	67	540.2779783588815	NaN	0	540.2789306640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YNAQLSDRI_	ENSG00000182870|ENST00000328957|GALNT9;ENST00000424720.2_12:132824120-132905933:-|nuORF;ENST00000540493.1_12:132859905-132863044:-|nuORF;nc|ENSG00000182870|Q9HCQ5|GALNT9	42.86426827375447	0.2558691296974908	2				NaN	NaN	0	NaN	10378	4198	14573
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14587	38.395	NaN	11584	30	0	1929.7	0.214	+			4518	ATKKTKDSH	9	75	508.27895407988916	1014.5433552265783	2	508.28143310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATKKTKDSH_	ENSG00000151687|ENST00000684021|ANKAR	82.24051045832904	0.08786059719216216	2				NaN	NaN	0	NaN	10384	4201	14586
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14588	38.399	NaN	8912.3	30	0	1002.9	0.106	+			28100	NAFKEITTM	9	76	527.7652818302445	1053.5160107272889	2	527.7659301757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NAFKEITTM_	ENSG00000137947|ENST00000370500|GTF2B;ENST00000486078.1_1_1:89325774-89329699:-|nuORF;ENST00000494819.5_1_1:89324456-89357188:-|nuORF	136.26810882979174	0.012230845423532208	2				NaN	NaN	0	NaN	10385	4201	14586
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14589	38.401	NaN	6335.3	30	0	735.26	0.106	+			50864	YFAERVTSL	9	71	543.2847197120162	1084.5548864908324	2	543.2853393554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YFAERVTSL_	ENSG00000213145|ENST00000392531|CRIP1	78.26377905018397	0.10505600812668463	2				NaN	NaN	0	NaN	10386	4201	14586
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14590	38.403	NaN	3078.2	30	0	310.7	0.106	+			9846	EPSPPALLR	9	53	490.2821381227802	978.5497233123605	2	490.2818298339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EPSPPALLR_	ENST00000253237.9_1_19:48957556-48957973:+|nuORF	51.33545320467046	0.2872990594074956	2				NaN	NaN	0	NaN	10387	4201	14586
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14591	38.404	NaN	2006	30	0	144.99	0.106			+	37518	SLLLSLLN	8	55	436.7763062771195	871.538059621039	2	436.7757568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SLLLSLLN_	REV__ENST00000569693.5_1_15:73044165-73044228:-|nuORF	60.97194046774394	0.49215940876911696	2				NaN	NaN	0	NaN	10388	4201	14586
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14592	38.406	NaN	1795.1	30	0	162.71	0.106	+			24846	LKARFKPEF	9	65	568.334656459509	1134.654759985818	2	568.3353271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LKARFKPEF_	tr|U7T4Z1|U7T4Z1_FUSNUChaperoneproteinClpBOS=FusobacteriumnucleatumCTI-5OX=1316586GN=clpBPE=3SV=1	42.86426827375447	0.38666266728046506	2				NaN	NaN	0	NaN	10389	4201	14586
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14593	38.408	NaN	2458.9	30	0	447.96	0.036			+	31206	QGRLDKKTL	9	63	529.8187940343715	1057.623035135543	2	530.2798461914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QGRLDKKTL_	REV__ENSG00000131626|ENST00000253925|PPFIA1;REV__ENST00000526262.5_1_11:70189825-70228249:+|nuORF;REV__ENST00000531657.1_1_11:70218293-70228249:+|nuORF;REV__ENST00000532504.5_1_11:70185286-70228249:+|nuORF;REV__nc|ENSG00000131626|Q13136-2|PPFIA1	31.529811441608018	0.5085848003137583	2				NaN	NaN	0	NaN	10390	4201	14586
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14604	38.433	NaN	5262.3	30	0	1316.4	0.214				-1	ASMKKVKSL	9	48	336.5341797225168	NaN	0	336.5341796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ASM(Oxidation (M))KKVKSL_	ENST00000369426.9_1_1:119575536-119588262:-|nuORF	39.252832667884924	0.27938773122138094	2				NaN	NaN	0	NaN	10398	4204	14603
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14605	38.437	NaN	3236.5	30	0	394.96	0.106	+			48572	VTQDFMMYR	9	73	595.7705413680007	NaN	0	595.7706298828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTQDFMMYR_	CTSH|p.N292Mfs*8|1|0.31|ENSG00000103811|chr15:78923050-78923050|T/-|frameshift_variant;ENSG00000103811|ENST00000220166|CTSH;ENST00000527715.5_1_15:79214474-79217794:-|nuORF;ENST00000533777.5_1_15:79214474-79223953:-|nuORF;ENST00000534237.5_1_15:79214474-79224366:-|nuORF	96.0336014099291	0.029433397039169355	2				NaN	NaN	0	NaN	10399	4204	14603
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14606	38.439	NaN	3874.6	30	0	666.94	0.106	+			14927	GTMEWIMIK	9	65	570.77489130328	1139.53522967336	2	570.7748413085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Oxidation (M)	_GTM(Oxidation (M))EWIM(Oxidation (M))IK_	ENSG00000168273|ENST00000477703|UQCC5	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	10400	4204	14603
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14607	38.44	NaN	2051.9	30	0	237.01	0.106			+	51188	YPILGQFI	8	59	475.7688602983483	NaN	0	475.7680969238281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YPILGQFI_	REV__tr|U7T8R7|U7T8R7_FUSNUNa+/H+antiporterNhaC-likeC-terminaldomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00145PE=3SV=1	46.76643321282427	1.7418937515398478	2				NaN	NaN	0	NaN	10401	4204	14603
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14608	38.442	NaN	1939.2	30	0	105.62	0.106			+	25796	LSATLALGLQ	10	69	493.797381539267	NaN	0	493.79742431640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSATLALGLQ_	REV__ENST00000531383.5_1_11:62383175-62383313:-|nuORF	51.19269402634007	0.2980620950593832	2				NaN	NaN	0	NaN	10402	4204	14603
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14609	38.444	NaN	2254.9	30	0	383.9	0.106	+			30767	QDQQVRGPEA	10	68	564.2734224056866	NaN	0	564.271240234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QDQQVRGPEA_	ENST00000526142.5_1_11:428365-428637:-|nuORF	46.45678178249821	0.32800322091223805	2				NaN	NaN	0	NaN	10403	4204	14603
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14610	38.446	NaN	2356.9	30	0	205.75	0.036			+	-1	FSIIIGTGLN	10	65	538.8027948870591	NaN	0	538.8020629882812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))FSIIIGTGLN_	REV__ABCB1|p.A841T|1|0.36|ENSG00000085563|chr7:87531458-87531458|C/T|missense_variant;REV__ABCB1|p.P1016Lfs*2|1|0.23|ENSG00000085563|chr7:87516546-87516546|G/-|frameshift_variant;REV__ENSG00000005471|ENST00000649586|ABCB4;REV__ENSG00000085563|ENST00000622132|ABCB1;REV__ENST00000488737.6_1_7:87133561-87160896:-|nuORF;REV__nc|ENSG00000005471|P21439-3|ABCB4;REV__nc|ENSG00000005471|P21439|ABCB4;REV__nc|ENSG00000085563|P08183-2|ABCB1	36.446750945000026	0.3805027428805705	2				NaN	NaN	0	NaN	10404	4204	14603
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14620	38.469	NaN	4126.3	30	0	502.47	0.214			+	26311	LSVQPAPEK	9	65	484.77416628062457	967.5337796280492	2	485.2733459472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSVQPAPEK_	REV__ENSG00000164080|ENST00000684192|RAD54L2;REV__ENST00000461680.1_1_3:51673299-51697433:+|nuORF;REV__ENST00000487093.5_1_3:51669772-51697433:+|nuORF;REV__RAD54L2|p.S1325Pfs*18|1|0.33|ENSG00000164080|chr3:51662984-51662984|C/-|frameshift_variant	56.72105179125745	0.24094814563026265	2				NaN	NaN	0	NaN	10411	4207	14619
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14621	38.473	NaN	3095.9	30	0	412.83	0.106				-1	 	0	72	560.3277011442116	559.3204246776115	1	563.3367919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10412	4207	14619
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14622	38.475	NaN	1798.9	30	0	216.86	0.106			+	25214	LMMGWIFGFT	10	63	601.7886076920842	1201.5626624509682	2	601.7886352539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LMMGWIFGFT_	REV__ENSG00000152127|ENST00000281923|MGAT5;REV__MGAT5|p.F186Lfs*43|1|0.37|ENSG00000152127|chr2:134318718-134318718|T/-|frameshift_variant;REV__MGAT5|p.K403Nfs*4|1|0.39|ENSG00000152127|chr2:134349898-134349898|A/-|frameshift_variant	29.14955571784316	0.6417842315402807	2				NaN	NaN	0	NaN	10413	4207	14619
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14623	38.476	NaN	1948.5	30	0	243.05	0.106				-1	SCCLPGDRLRM	11	67	682.8155370254041	1363.616521117608	2	682.8147583007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_SC(Carbamidomethyl (C))C(Carbamidomethyl (C))LPGDRLRM_	ENST00000280481.8_1_13:39261272-39261452:+|nuORF	23.52269567125451	0.7430573033454468	2				NaN	NaN	0	NaN	10414	4207	14619
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14624	38.478	NaN	1444.3	30	0	255.03	0.034			+	29106	NTPPSLPTV	9	48	463.2534463455862	NaN	0	463.25347900390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NTPPSLPTV_	REV__ENSG00000115414|ENST00000354785|FN1;REV__FN1|p.L1714*|1|0.2|ENSG00000115414|chr2:215380832-215380832|G/-|frameshift_variant;REV__FN1|p.S1791Rfs*9|1|0.07|ENSG00000115414|chr2:215378239-215378239|A/-|frameshift_variant;REV__nc|ENSG00000115414|P02751-1|FN1;REV__nc|ENSG00000115414|P02751-10|FN1;REV__nc|ENSG00000115414|P02751-11|FN1;REV__nc|ENSG00000115414|P02751-12|FN1;REV__nc|ENSG00000115414|P02751-13|FN1;REV__nc|ENSG00000115414|P02751-14|FN1;REV__nc|ENSG00000115414|P02751-17|FN1;REV__nc|ENSG00000115414|P02751-3|FN1;REV__nc|ENSG00000115414|P02751-4|FN1;REV__nc|ENSG00000115414|P02751-5|FN1;REV__nc|ENSG00000115414|P02751-6|FN1;REV__nc|ENSG00000115414|P02751-7|FN1;REV__nc|ENSG00000115414|P02751-8|FN1;REV__nc|ENSG00000115414|P02751-9|FN1	36.446750945000026	0.29355505452396785	2				NaN	NaN	0	NaN	10415	4207	14619
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14632	38.498	NaN	7812.7	30	0	1659	0.215	+			12133	GAHGIIVVY	9	64	464.7663243644528	927.5180957957057	2	464.7658386230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GAHGIIVVY_	ENSG00000138069|ENST00000409784|RAB1A;ENSG00000174903|ENST00000311481|RAB1B	39.021493756699265	0.43173687394350213	2				NaN	NaN	0	NaN	10420	4210	14631
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14633	38.501	NaN	3628.7	30	0	1053.9	0.106	+			31153	QGIERLHP	8	59	475.2649795899476	NaN	0	475.26397705078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QGIERLHP_	ENSG00000155868|ENST00000286317|MED7	38.80614096846853	1.7418937515398478	2				NaN	NaN	0	NaN	10421	4210	14631
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14634	38.503	NaN	3824.5	30	0	1026.8	0.106				-1	YAFFECKR	8	55	374.17897312174597	1119.515089965438	3	374.513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_YAFFEC(Carbamidomethyl (C))KR_	ENSG00000183513|ENST00000328709|COA5;ENST00000466848.1_1_2:99217217-99222254:-|nuORF;ENST00000483527.5_1_2:99217217-99224734:-|nuORF	33.51558372728122	0.7005509609380386	2				NaN	NaN	0	NaN	10422	4210	14631
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14635	38.505	NaN	1966.2	30	0	323.06	0.106			+	10830	FASEHDPTPR	10	61	578.7732418377961	NaN	0	578.77294921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FASEHDPTPR_	REV__ENST00000321248.4_1_10:134261270-134261444:+|nuORF	31.529811441608018	0.39664753963064203	2				NaN	NaN	0	NaN	10423	4210	14631
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14636	38.507	NaN	5385	30	0	354.75	0.106				-1	LMEKSRGLAG	10	78	539.2878821393499	1076.5612113454997	2	539.286865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_LM(Oxidation (M))EKSRGLAG_	ENST00000455565.5_2_17:43714009-43714156:+|nuORF	54.776311868738084	0.41334902933431344	2				NaN	NaN	0	NaN	10424	4210	14631
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14637	38.508	NaN	7167.3	30	0	1281.9	0.036	+			28653	NLKRAKESI	9	79	529.8187940343715	1057.623035135543	2	529.8213500976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NLKRAKESI_	ENSG00000110756|ENST00000349215|HPS5;ENST00000352460.7_1_11:18303495-18317646:-|nuORF;nc|ENSG00000110756|Q9UPZ3-2|HPS5	30.503639358989545	0.5181749237905803	2				NaN	NaN	0	NaN	10425	4210	14631
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14648	38.534	NaN	28991	30	0	4760.3	0.214	+			12731	GEKVDFNTF	9	92	528.7540327696008	1055.4935126060016	2	528.7542724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEKVDFNTF_	ENSG00000176153|ENST00000389614|GPX2;GPX2|p.W152*|1|0.31|ENSG00000176153|chr14:64939605-64939605|C/-|frameshift_variant	104.01359247289065	0.03510646158778409	2				NaN	NaN	0	NaN	10433	4213	14647
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14649	38.538	NaN	4779.2	30	0	280.25	0.106	+			15869	GYLADPAKF	9	67	491.25644953307307	980.4983461329462	2	491.25604248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GYLADPAKF_	ENSG00000137547|ENST00000260102|MRPL15	101.60071028292904	0.0375685401170269	2				NaN	NaN	0	NaN	10434	4213	14647
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14650	38.54	NaN	6146.8	30	0	478.13	0.106	+			49938	VYVQHPITF	9	74	552.2981226296585	1102.5816923261168	2	552.2984008789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYVQHPITF_	ENSG00000189067|ENST00000622633|LITAF;nc|ENSG00000189067|Q99732-2|LITAF;nc|ENSG00000189067|Q99732-3|LITAF	114.8945686534367	0.024290463251177924	2				NaN	NaN	0	NaN	10435	4213	14647
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14651	38.541	NaN	3610.6	30	0	460.73	0.106	+			19075	IYIAGHPAF	9	62	494.7664134029213	987.5182738726426	2	494.7668151855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IYIAGHPAF_	ENSG00000104824|ENST00000221419|HNRNPL;ENST00000568980.1_1_15:34781792-34782686:-|nuORF;HNRNPL|p.P337Hfs*58|9|0.35|ENSG00000104824|chr19:38840319-38840319|G/-|frameshift_variant;HNRNPL|p.P338Tfs*56|1|0.23|ENSG00000104824|chr19:38840318-38840319|-/G|frameshift_variant;nc|ENSG00000104824|P14866-2|HNRNPL	85.90917672979207	0.07639869513036507	2				NaN	NaN	0	NaN	10436	4213	14647
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14652	38.543	NaN	2394.5	30	0	163.7	0.037	+			40385	STTVLFISQR	10	67	576.3225760289214	NaN	0	576.323486328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STTVLFISQR_	ENSG00000102531|ENST00000492622|FNDC3A;nc|ENSG00000102531|Q9Y2H6-2|FNDC3A	109.43880257439609	0.012705359521079733	2				NaN	NaN	0	NaN	10437	4213	14647
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14659	38.561	NaN	12842	30	0	2530.8	0.214	+			49494	VVYVGGILTK	10	65	524.8238676839214	1047.6331824346428	2	524.82373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVYVGGILTK_	ENSG00000174607|ENST00000310836|UGT8	90.60085204095205	0.12763388345653318	2				NaN	NaN	0	NaN	10441	4216	14658
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14660	38.565	NaN	4703.3	30	0	856.58	0.106	+			15822	GVYSFQFNK	9	69	545.2717431684324	1088.5289334036647	2	545.2720947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GVYSFQFNK_	ENSG00000076067|ENST00000262031|RBMS2;ENST00000525031.2_1_12:94817522-94817669:-|nuORF	85.16082228582465	0.07850854922700509	2				NaN	NaN	0	NaN	10442	4216	14658
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14661	38.567	NaN	3854.2	30	0	504.11	0.106	+			31160	QGISSLKVWT	10	62	373.54397119106875	1117.6100841734062	3	373.54412841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QGISSLKVWT_	ENSG00000158571|ENST00000375006|PFKFB1;nc|ENSG00000158571|P16118-2|PFKFB1	19.262678746197807	0.7185678156885812	2				NaN	NaN	0	NaN	10443	4216	14658
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14662	38.569	NaN	2325.1	30	0	433.2	0.037	+			33768	RPVILIGYGT	10	60	363.5530813257107	NaN	0	363.553466796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RPVILIGYGT_	ENSG00000141449|ENST00000424526|GREB1L;ENST00000578368.5_1_18:18963479-19048745:+|nuORF;ENST00000584446.5_1_18:18963479-19034595:+|nuORF;GREB1L|p.G1039Qfs*16|1|0.06|ENSG00000141449|chr18:21495754-21495755|GG/-|frameshift_variant;GREB1L|p.T1038Kfs*19|1|0.06|ENSG00000141449|chr18:21495751-21495752|-/AACT|frameshift_variant;nc|ENSG00000141449|Q9C091-3|GREB1L;nc|ENSG00000141449|Q9C091-4|GREB1L	21.9598887501803	0.4201028297492154	2				NaN	NaN	0	NaN	10444	4216	14658
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14671	38.59	NaN	4850.6	30	0	266.38	0.214				-1	 	0	87	499.2751078310193	498.2678313644193	1	502.282958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10450	4219	14670
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14672	38.594	NaN	5250.9	30	0	539.83	0.106				-1	GTIQMLLNHS	10	71	565.2871456611729	1128.5597383891457	2	565.2877197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_GTIQM(Oxidation (M))LLNHS_	ENSG00000142733|ENST00000357582|MAP3K6;ENST00000470890.1_1_1:27681884-27683265:-|nuORF;nc|ENSG00000142733|O95382-3|MAP3K6	76.16968421966216	0.22691431239609447	2				NaN	NaN	0	NaN	10451	4219	14670
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14673	38.596	NaN	3544.7	30	0	508.53	0.106	+			5311	ATVLQYAPKQ	10	52	373.54397119106875	1117.6100841734062	3	374.1793212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATVLQYAPKQ_	ENSG00000104093|ENST00000560891|DMXL2;nc|ENSG00000104093|Q8TDJ6-2|DMXL2;nc|ENSG00000104093|Q8TDJ6-3|DMXL2;nc|ENSG00000104093|Q8TDJ6|DMXL2	21.68575002086885	0.7027366847906487	2				NaN	NaN	0	NaN	10452	4219	14670
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14674	38.597	NaN	7833	30	0	627.48	0.106	+			11941	FVIETARQL	9	75	538.808525200607	1075.602497468014	2	538.8065795898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FVIETARQL_	ENSG00000119669|ENST00000238647|IRF2BPL;ENSG00000168264|ENST00000366609|IRF2BP2;IRF2BP2|p.K554Nfs*26|1|0.21|ENSG00000168264|chr1:234607239-234607239|T/-|frameshift_variant;IRF2BPL|p.G195Afs*17|1|0.33|ENSG00000119669|chr14:77027209-77027209|C/-|frameshift_variant;IRF2BPL|p.G244Vfs*101|1|0.32|ENSG00000119669|chr14:77027062-77027062|C/-|frameshift_variant;IRF2BPL|p.L713Sfs*54|1|0.54|ENSG00000119669|chr14:77025656-77025656|G/-|frameshift_variant;nc|ENSG00000168264|Q7Z5L9-2|IRF2BP2	65.15724298150197	0.17062369902793603	2				NaN	NaN	0	NaN	10453	4219	14670
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14675	38.599	NaN	1942.7	30	0	165.98	0.034			+	28617	NKSSRTSR	8	66	468.25396728515625	NaN	0	468.25396728515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NKSSRTSR_	REV__ENSG00000145241|ENST00000273853|CENPC;REV__ENST00000507196.1_1_4:68370869-68374596:-|nuORF;REV__ENST00000510189.5_1_4:68359569-68411187:-|nuORF	34.172542307311794	1.7418937515398478	2				NaN	NaN	0	NaN	10454	4219	14670
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14681	38.615	NaN	12937	30	0	1046.2	0.214	+			11942	FVIETARQL	9	80	538.808525200607	1075.602497468014	2	538.8085327148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FVIETARQL_	ENSG00000119669|ENST00000238647|IRF2BPL;ENSG00000168264|ENST00000366609|IRF2BP2;IRF2BP2|p.K554Nfs*26|1|0.21|ENSG00000168264|chr1:234607239-234607239|T/-|frameshift_variant;IRF2BPL|p.G195Afs*17|1|0.33|ENSG00000119669|chr14:77027209-77027209|C/-|frameshift_variant;IRF2BPL|p.G244Vfs*101|1|0.32|ENSG00000119669|chr14:77027062-77027062|C/-|frameshift_variant;IRF2BPL|p.L713Sfs*54|1|0.54|ENSG00000119669|chr14:77025656-77025656|G/-|frameshift_variant;nc|ENSG00000168264|Q7Z5L9-2|IRF2BP2	125.71293069911285	0.017741295328254008	2				NaN	NaN	0	NaN	10457	4222	14680
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14682	38.618	NaN	4530.3	30	0	609.29	0.037	+			10623	EYNNNFHVL	9	68	575.2700944339514	1148.5256359347027	2	575.2679443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EYNNNFHVL_	ENSG00000151151|ENST00000373935|IPMK;ENST00000425988.1_1_13:23411483-23411888:-|nuORF	40.5726180659479	0.4135428067754104	2				NaN	NaN	0	NaN	10458	4222	14680
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14698	38.668	NaN	7784.7	30	0	1561.2	0.214	+			50116	WHGRIKGGM	9	66	529.2709134609815	1056.527273988763	2	529.2696533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_WHGRIKGGM(Oxidation (M))_	ENSG00000138193|ENST00000371380|PLCE1;nc|ENSG00000138193|Q9P212-2|PLCE1;PLCE1|p.A1544Pfs*9|1|0.07|ENSG00000138193|chr10:94273681-94273681|A/-|frameshift_variant;PLCE1|p.E2087Gfs*37|1|0.1|ENSG00000138193|chr10:94316672-94316676|AGAAG/-|frameshift_variant	57.81127852772723	0.2318599694398087	2				NaN	NaN	0	NaN	10465	4231	14697
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14699	38.672	NaN	3368	30	0	294.27	0.106			+	47144	VLQQYIQI	8	73	502.7919616699219	NaN	0	502.7919616699219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VLQQYIQI_	REV__ENSG00000197535|ENST00000399233|MYO5A;REV__nc|ENSG00000197535|Q9Y4I1-2|MYO5A;REV__nc|ENSG00000197535|Q9Y4I1|MYO5A	68.484700416344	1.7418937515398478	2				NaN	NaN	0	NaN	10466	4231	14697
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14700	38.674	NaN	3402	30	0	1238.8	0.033			+	2772	ARMEPSPV	8	53	443.7272010952777	885.4398492573554	2	443.7271728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ARMEPSPV_	REV__ENST00000381261.8_1_X:1718342-1718525:+|nuORF	38.80614096846853	0.6637206697844082	2				NaN	NaN	0	NaN	10467	4231	14697
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14707	38.691	NaN	8040.3	30	0	960.46	0.143			+	35783	SEAFKPKLA	9	80	495.7848515858217	989.5551502384434	2	495.784423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEAFKPKLA_	REV__ENSG00000117862|ENST00000371626|TXNDC12	56.43379154798735	0.2433427591689151	2				NaN	NaN	0	NaN	10471	4234	14706
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14717	38.715	NaN	12610	30	0	5907.8	0.214	+			15266	GTTITLVLK	9	65	473.3030518360761	944.5915507389523	2	473.302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTTITLVLK_	ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF;ENST00000559111.1_1_15:99798356-99798647:+|nuORF	85.16082228582465	0.07850854922700509	2				NaN	NaN	0	NaN	10478	4237	14716
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14718	38.719	NaN	5047.4	30	0	586.89	0.036			+	26620	LVAGPHQLIY	10	70	555.8185474152135	1109.622541897227	2	555.819091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LVAGPHQLIY_	REV__ENSG00000153250|ENST00000348849|RBMS1;REV__nc|ENSG00000153250|P29558-2|RBMS1	65.46538089061403	0.31613324008013116	2				NaN	NaN	0	NaN	10479	4237	14716
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14727	38.74	NaN	8861.1	30	0	1601.2	0.214	+			26972	LYLDEAHSI	9	63	530.7691878781047	1059.5238228230094	2	530.7693481445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LYLDEAHSI_	ENSG00000100596|ENST00000216484|SPTLC2	116.90359126533652	0.02307425081617795	2				NaN	NaN	0	NaN	10485	4240	14726
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14728	38.744	NaN	3675.7	30	0	669.4	0.106	+			14908	GTLTQNEMIFK	11	71	641.3285953038338	1280.6426376744676	2	641.3299560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTLTQNEMIFK_	ENSG00000054793|ENST00000338821|ATP9A;ENSG00000166377|ENST00000426216|ATP9B;nc|ENSG00000054793|O75110-2|ATP9A;nc|ENSG00000166377|O43861-2|ATP9B	99.78786539795823	0.061125669442822994	2				NaN	NaN	0	NaN	10486	4240	14726
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14729	38.746	NaN	2975.2	30	0	480.51	0.035	+			37314	SLDQLSPEQ	9	64	508.74796284163233	1015.4813727500647	2	508.7476501464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLDQLSPEQ_	ENST00000515789.1_1_4:153590021-153590336:+|nuORF	51.19269402634007	0.2889735674168909	2				NaN	NaN	0	NaN	10487	4240	14726
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14735	38.762	NaN	8596.5	30	0	1925.5	0.214	+			14113	GSLNWVPVTK	10	72	550.809082141827	1099.603611350454	2	550.8084716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSLNWVPVTK_	ENSG00000196188|ENST00000358184|CTSE;nc|ENSG00000196188|P14091-2|CTSE;nc|ENSG00000196188|P14091-3|CTSE	84.31045756130733	0.1636476603981187	2				NaN	NaN	0	NaN	10490	4243	14734
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14736	38.765	NaN	4575.8	30	0	477.1	0.106	+			45505	TYFDKNYNL	9	72	589.2800078066122	1176.5454626800242	2	589.280029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TYFDKNYNL_	ENSG00000116641|ENST00000635253|DOCK7;ENST00000467758.1_1_1:62941350-62941566:-|nuORF;nc|ENSG00000116641|Q96N67-2|DOCK7;nc|ENSG00000116641|Q96N67-3|DOCK7;nc|ENSG00000116641|Q96N67-4|DOCK7;nc|ENSG00000116641|Q96N67-5|DOCK7;nc|ENSG00000116641|Q96N67-6|DOCK7	82.24051045832904	0.08786059719216216	2				NaN	NaN	0	NaN	10491	4243	14734
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14737	38.767	NaN	1869.9	30	0	155.1	0.032				-1	 	0	46	389.73951971829615	777.4644865033923	2	389.73931884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10492	4243	14734
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14748	38.791	NaN	5545	30	0	1007.2	0.214				-1	 	0	48	336.5341033168387	1006.5804805507162	3	336.5342712402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10500	4246	14747
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14749	38.794	NaN	7148.9	30	0	1847.3	0.106	+			14114	GSLNWVPVTK	10	66	550.809082141827	1099.603611350454	2	550.8089599609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSLNWVPVTK_	ENSG00000196188|ENST00000358184|CTSE;nc|ENSG00000196188|P14091-2|CTSE;nc|ENSG00000196188|P14091-3|CTSE	86.18897241530135	0.15289278403033058	2				NaN	NaN	0	NaN	10501	4246	14747
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14750	38.796	NaN	3234	30	0	967.67	0.106			+	-1	PMCSRLRITI	10	66	631.8393589451858	1261.6641649571716	2	631.8406372070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_PM(Oxidation (M))C(Carbamidomethyl (C))SRLRITI_	REV__ENST00000471186.5_1_2:118867212-118867425:+|nuORF	21.9598887501803	0.7004979571547932	2				NaN	NaN	0	NaN	10502	4246	14747
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14751	38.798	NaN	1491.6	30	0	158.18	0.106				-1	 	0	50	384.77238892617055	767.5302249191411	2	384.7721252441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10503	4246	14747
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14752	38.8	NaN	2112.5	30	0	162.22	0.035	+			28955	NSDPNLHLL	9	62	511.7672178076279	1021.5198826820558	2	511.7688903808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NSDPNLHLL_	ENSG00000136830|ENST00000373312|NIBAN2;nc|ENSG00000136830|Q96TA1-2|NIBAN2	37.81151784470057	0.4459294069877048	2				NaN	NaN	0	NaN	10504	4246	14747
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14761	38.821	NaN	6224.1	30	0	1062.1	0.214	+			271	AANPHSFVF	9	69	495.2455093431109	988.4764657530218	2	495.2455139160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AANPHSFVF_	ENSG00000130810|ENST00000253107|PPAN;nc|ENSG00000130810|Q9NQ55-2|PPAN;nc|ENSG00000130810|Q9NQ55-3|PPAN	37.81151784470057	0.4459294069877048	2				NaN	NaN	0	NaN	10510	4249	14760
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14762	38.825	NaN	3745.7	30	0	554.48	0.106			+	8356	EALHTVSLV	9	59	484.77416628062457	967.5337796280492	2	484.7738952636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EALHTVSLV_	REV__ENSG00000180919|ENST00000316529|OR56B4	53.351449002276354	0.2690372970092375	2				NaN	NaN	0	NaN	10511	4249	14760
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14763	38.827	NaN	2735.2	30	0	771.39	0.106			+	-1	SMRLVSHMQ	9	48	368.8479682287666	1103.5220752864998	3	368.84796142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_SM(Oxidation (M))RLVSHMQ_	REV__ENST00000582835.1_1_2:95558347-95558446:-|nuORF	25.57405402267927	0.5642445186134241	2				NaN	NaN	0	NaN	10512	4249	14760
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14764	38.828	NaN	1983.1	30	0	880.04	0.106				-1	 	0	41	446.25961497691844	445.25233851031845	1	446.25933837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10513	4249	14760
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14765	38.83	NaN	2375.4	30	0	260.62	0.106			+	17589	IEEMKGRCF	9	61	556.7637329101562	NaN	0	556.7637329101562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IEEMKGRCF_	REV__ENSG00000130540|ENST00000330884|SULT4A1;REV__nc|ENSG00000130540|Q9BR01-2|SULT4A1	44.116797842482775	0.2472372736944149	2				NaN	NaN	0	NaN	10514	4249	14760
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14766	38.832	NaN	2530.9	30	0	343.67	0.035			+	23646	LARKPQVQA	9	62	505.8086232902696	1009.6026936473393	2	506.3115539550781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LARKPQVQA_	REV__ENSG00000116032|ENST00000234389|GRIN3B	29.14955571784316	0.5308295550522326	2				NaN	NaN	0	NaN	10515	4249	14760
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14770	38.846	NaN	7414.2	30	0	1658.8	0.214	+			6102	AVNMVPFPR	9	78	515.7790421179494	1029.5435313026987	2	515.7784423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVNMVPFPR_	CON__ENSEMBL:ENSBTAP00000025008;ENSG00000101162|ENST00000217133|TUBB1;ENSG00000104833|ENST00000264071|TUBB4A;ENSG00000137267|ENST00000333628|TUBB2A;ENSG00000137285|ENST00000259818|TUBB2B;ENSG00000173213|ENST00000308911|TUBB8B;ENSG00000176014|ENST00000317702|TUBB6;ENSG00000188229|ENST00000340384|TUBB4B;ENSG00000196230|ENST00000327892|TUBB;ENSG00000258947|ENST00000315491|TUBB3;ENSG00000261456|ENST00000568584|TUBB8;ENST00000290377.9_1_9:141071128-141071713:+|nuORF;ENST00000417736.2_1_18:12308439-12326126:+|nuORF;ENST00000518096.1_1_8:30210219-30210855:+|nuORF;ENST00000604929.1_1_9:140136931-140138005:+|nuORF;nc|ENSG00000258947|Q13509-2|TUBB3	58.78195531508484	0.22376836668196862	2				NaN	NaN	0	NaN	10516	4252	14769
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14771	38.85	NaN	7099.7	30	0	3487.3	0.106	+			13591	GLVLGLGAL	9	52	406.7658748373659	811.5171967415318	2	406.7655944824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GLVLGLGAL_	ENSG00000204420|ENST00000649779|MPIG6B;ENST00000466312.5_1_6:31691160-31692010:+|nuORF;nc|ENSG00000204420|O95866-2|MPIG6B;nc|ENSG00000204420|O95866-6|MPIG6B;nc|ENSG00000204420|O95866-7|MPIG6B	49.21078951299608	0.3122205139198386	2				NaN	NaN	0	NaN	10517	4252	14769
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14772	38.852	NaN	3902	30	0	562.16	0.106	+			9063	EGGIHKDIL	9	62	491.2718542815653	980.5291556299306	2	491.2716369628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EGGIHKDIL_	PARP8|p.E842D|1|0.29|ENSG00000151883|chr5:50842029-50842029|G/T|missense_variant	42.86426827375447	0.38666266728046506	2				NaN	NaN	0	NaN	10518	4252	14769
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14773	38.853	NaN	2561.1	30	0	339.54	0.106	+			1958	AIVGRPNVGK	10	66	505.8086232902696	1009.6026936473393	2	506.31317138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AIVGRPNVGK_	tr|U7T2F7|U7T2F7_FUSNUGTPaseDerOS=FusobacteriumnucleatumCTI-5OX=1316586GN=derPE=3SV=1	44.116797842482775	0.5112108506279902	2				NaN	NaN	0	NaN	10519	4252	14769
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14774	38.855	NaN	1059.4	30	0	132.28	0.106	+			35665	SDAVIGKVI	9	44	451.27074405215996	NaN	0	451.2705993652344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SDAVIGKVI_	nc|ENSG00000115977|Q2M2I8-2|AAK1	23.04248740728303	0.3589936788096251	2				NaN	NaN	0	NaN	10520	4252	14769
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14775	38.857	NaN	1742.8	30	0	178.61	0.036			+	47491	VQGMFDTYF	9	59	554.2452493782574	NaN	0	554.2450561523438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VQGMFDTYF_	REV__ENSG00000022567|ENST00000517878|SLC45A4;REV__nc|ENSG00000022567|Q5BKX6-2|SLC45A4;REV__nc|ENSG00000022567|Q5BKX6-3|SLC45A4;REV__nc|ENSG00000022567|Q5BKX6|SLC45A4;REV__SLC45A4|p.K543Rfs*46|1|0.44|ENSG00000022567|chr8:141218014-141218014|G/-|frameshift_variant	27.882242232435846	0.3367954786602879	2				NaN	NaN	0	NaN	10521	4252	14769
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14782	38.875	NaN	5941.4	30	0	501.63	0.214	+			4402	ATIALMIQR	9	70	508.7992298405955	1015.583906747991	2	508.7992248535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATIALMIQR_	ENSG00000119969|ENST00000348459|HELLS;nc|ENSG00000119969|Q9NRZ9-2|HELLS;nc|ENSG00000119969|Q9NRZ9-3|HELLS;nc|ENSG00000119969|Q9NRZ9-4|HELLS;nc|ENSG00000119969|Q9NRZ9-5|HELLS;nc|ENSG00000119969|Q9NRZ9-6|HELLS;nc|ENSG00000119969|Q9NRZ9-7|HELLS;nc|ENSG00000119969|Q9NRZ9-8|HELLS	143.8867514904718	0.008656634767784652	2				NaN	NaN	0	NaN	10525	4255	14781
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14783	38.878	NaN	3625.9	30	0	524.12	0.106			+	-1	LECSGAGLPPL	11	75	557.2824188459999	1112.5502847587998	2	557.2822875976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LEC(Carbamidomethyl (C))SGAGLPPL_	REV__ENST00000245479.2_1_17:70117265-70117388:+|nuORF	56.72105179125745	0.35272424613657194	2				NaN	NaN	0	NaN	10526	4255	14781
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14784	38.88	NaN	2109.2	30	0	171.19	0.034	+			16856	HPFAIENI	8	57	470.74962430543246	939.484695677665	2	470.74993896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HPFAIENI_	ENSG00000171956|ENST00000396057|FOXB1;ENSG00000204612|ENST00000376708|FOXB2	46.76643321282427	0.6143254112625767	2				NaN	NaN	0	NaN	10527	4255	14781
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14793	38.902	NaN	8582	30	0	1331.2	0.214	+			17614	IEHGIITNW	9	68	541.7854151917053	1081.5562774502105	2	541.78515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IEHGIITNW_	ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENST00000473016.1_1_2:74120109-74129648:+|nuORF;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000488967.5_1_10:90706975-90712518:-|nuORF	66.42927471994793	0.16001998865088202	2				NaN	NaN	0	NaN	10533	4258	14792
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14794	38.905	NaN	2822.8	30	0	305.78	0.106	+			23921	LDLSSNDIS	9	57	482.23441639861016	962.4542798640204	2	482.2352294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LDLSSNDIS_	LRTM1|p.N133D|1|0.36|ENSG00000144771|chr3:54924826-54924826|T/C|missense_variant	65.46538089061403	0.16805504838372562	2				NaN	NaN	0	NaN	10534	4258	14792
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14795	38.907	NaN	2791.8	30	0	285.77	0.106	+			49741	VYNSEYYHF	9	71	611.2648854598413	1220.5152179864824	2	611.2644653320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYNSEYYHF_	ENSG00000112655|ENST00000230419|PTK7;ENST00000487673.5_1_6:43111066-43128616:+|nuORF;nc|ENSG00000112655|Q13308-2|PTK7;nc|ENSG00000112655|Q13308-3|PTK7;nc|ENSG00000112655|Q13308-4|PTK7;nc|ENSG00000112655|Q13308-6|PTK7;PTK7|p.R964H|1|0.36|ENSG00000112655|chr6:43159805-43159805|G/A|missense_variant	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	10535	4258	14792
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14796	38.909	NaN	2074.1	30	0	431.64	0.106	+			30018	PPLSRPVY	8	57	464.7663243644528	927.5180957957057	2	464.76580810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PPLSRPVY_	ENSG00000172716|ENST00000685675|SLFN11;ENST00000586099.1_1_17:33687214-33689981:-|nuORF;SLFN11|p.G503Afs*15|1|0.2|ENSG00000172716|chr17:35353750-35353750|C/-|frameshift_variant	26.79610172149135	0.7524337208463756	2				NaN	NaN	0	NaN	10536	4258	14792
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14797	38.911	NaN	1836.3	30	0	266.68	0.036	+			49519	VYADQPHIF	9	57	545.2717431684324	1088.5289334036647	2	545.2716674804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VYADQPHIF_	ENSG00000100439|ENST00000428304|ABHD4	40.77816245573522	0.41113185337114944	2				NaN	NaN	0	NaN	10537	4258	14792
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14803	38.927	NaN	3472.5	30	0	316.46	0.214	+			6593	AYLSKAMEI	9	73	513.2704188228093	1024.5262847124186	2	513.2704467773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AYLSKAMEI_	ENSG00000124784|ENST00000379834|RIOK1;RIOK1|p.E533Rfs*20|1|0.19|ENSG00000124784|chr6:7414384-7414385|-/A|frameshift_variant	96.0336014099291	0.047854655524928534	2				NaN	NaN	0	NaN	10540	4261	14802
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14804	38.931	NaN	2595.7	30	0	276.51	0.106				-1	WMVTPLSN	8	55	482.23441639861016	962.4542798640204	2	482.23492431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_WM(Oxidation (M))VTPLSN_	ENSG00000144847|ENST00000393775|IGSF11;ENST00000459718.1_1_3:118644864-118649075:-|nuORF;IGSF11|p.S339Lfs*36|1|0.06|ENSG00000144847|chr3:118902801-118902802|-/AG|frameshift_variant;nc|ENSG00000144847|Q5DX21-2|IGSF11;nc|ENSG00000144847|Q5DX21-3|IGSF11	53.351449002276354	0.5676011784961348	2				NaN	NaN	0	NaN	10541	4261	14802
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14805	38.933	NaN	4776.9	30	0	702.65	0.106	+			5514	AVAGDFALINK	11	77	559.8133726164017	1117.6121922996033	2	559.814208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVAGDFALINK_	ATE1|p.A234Gfs*14|1|0.05|ENSG00000107669|chr10:121902505-121902506|-/T|frameshift_variant;ATE1|p.G197Vfs*3|1|0.03|ENSG00000107669|chr10:121902614-121902615|-/A|frameshift_variant;ENSG00000107669|ENST00000224652|ATE1;nc|ENSG00000107669|O95260-2|ATE1	77.28774426308219	0.17498409934748582	2				NaN	NaN	0	NaN	10542	4261	14802
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14806	38.934	NaN	3094	30	0	231.92	0.035	+			19953	KEGEFSTCF	9	67	524.2261931939544	1046.4378334547087	2	524.2265014648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEGEFSTCF_	ENSG00000089127|ENST00000202917|OAS1;nc|ENSG00000089127|P00973-2|OAS1;nc|ENSG00000089127|P00973-3|OAS1;nc|ENSG00000089127|P00973-4|OAS1;OAS1|p.N280Tfs*8|1|0.07|ENSG00000089127|chr12:112916689-112916689|A/-|frameshift_variant	39.252832667884924	0.4290233611298554	2				NaN	NaN	0	NaN	10543	4261	14802
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14814	38.953	NaN	11516	30	0	1388.4	0.214	+			30954	QENNLLKTL	9	74	536.8037923991874	1071.5930318651747	2	536.8032836914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QENNLLKTL_	ENSG00000102804|ENST00000458659|TSC22D1;ENST00000496314.1_1_13:45008764-45009186:-|nuORF;nc|ENSG00000102804|Q15714-2|TSC22D1;nc|ENSG00000102804|Q15714-3|TSC22D1;nc|ENSG00000102804|Q15714-5|TSC22D1	92.23892857375223	0.05855307001735979	2				NaN	NaN	0	NaN	10548	4264	14813
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14815	38.956	NaN	2363.1	30	0	332.48	0.106	+			19572	KCTSNPAEI	9	45	481.73391812118956	NaN	0	481.73394775390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KCTSNPAEI_	ENSG00000166192|ENST00000340912|SENP8;SENP8|p.H117Ifs*16|1|0.21|ENSG00000166192|chr15:72139966-72139966|T/-|frameshift_variant;SENP8|p.L88*|2|0.37|ENSG00000166192|chr15:72139882-72139882|T/-|frameshift_variant	52.936696900407355	0.1864545979552969	2				NaN	NaN	0	NaN	10549	4264	14813
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14816	38.958	NaN	2486.7	30	0	212.99	0.106	+			42035	SWDYRWNLT	9	57	620.7905217144238	1239.5664904956475	2	620.7896118164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SWDYRWNLT_	nc|ENSG00000279968|A0A096LPI5|CCDC28A-AS1	21.9598887501803	0.5980208138527809	2				NaN	NaN	0	NaN	10550	4264	14813
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14817	38.96	NaN	1406.6	30	0	170.79	0.035	+			47161	VLSHNKLTV	9	52	505.8055114746094	NaN	0	505.8055114746094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VLSHNKLTV_	ENST00000412878.2_1_10:53079678-53079921:+|nuORF	40.77816245573522	0.2702456086868081	2				NaN	NaN	0	NaN	10551	4264	14813
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14828	38.986	NaN	4232.7	30	0	275.98	0.214	+			49569	VYDTNPAKF	9	79	527.7639944738163	1053.5134360144325	2	527.7645874023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYDTNPAKF_	ENSG00000139433|ENST00000318348|GLTP	51.33545320467046	0.2872990594074956	2				NaN	NaN	0	NaN	10559	4267	14827
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14829	38.989	NaN	2253.5	30	0	215.44	0.106	+			17952	IGQSLTIPI	9	55	471.28676365306933	940.5589743729387	2	471.2873840332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IGQSLTIPI_	ENST00000533581.1_1_1:31658018-31661124:-|nuORF	51.33545320467046	0.2872990594074956	2				NaN	NaN	0	NaN	10560	4267	14827
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14830	38.991	NaN	3340.7	30	0	347.92	0.106	+			46416	VEQGVKFSL	9	62	503.78147926588673	1005.5484055985735	2	503.7816467285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VEQGVKFSL_	ENSG00000166557|ENST00000299705|TMED3;nc|ENSG00000166557|Q9Y3Q3-2|TMED3	80.45461616416974	0.09558281504443908	2				NaN	NaN	0	NaN	10561	4267	14827
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14831	38.993	NaN	3566.4	30	0	320.85	0.038	+			8649	EDLKIVKEKN	10	70	608.3518253475553	1214.6890977619105	2	608.3505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EDLKIVKEKN_	ANKRD26|p.K1234Nfs*19|2|0.18|ENSG00000107890|chr10:27033330-27033330|T/-|frameshift_variant;ANKRD26|p.K1452Rfs*7|1|0.29|ENSG00000107890|chr10:27017653-27017653|T/-|frameshift_variant;ANKRD26|p.N1518Ifs*14|1|0.04|ENSG00000107890|chr10:27014665-27014666|-/A|frameshift_variant;ANKRD26|p.N1518Lfs*11|1|0.04|ENSG00000107890|chr10:27014666-27014667|-/AGAATCATAGGAAATAA|frameshift_variant;ANKRD26|p.N1659Kfs*4|1|0.3|ENSG00000107890|chr10:27006939-27006940|-/T|frameshift_variant;ANKRD26|p.Y1555Ifs*2|1|0.28|ENSG00000107890|chr10:27014555-27014556|-/T|frameshift_variant;ENSG00000107890|ENST00000376087|ANKRD26;nc|ENSG00000107890|Q9UPS8-2|ANKRD26	45.02220120713402	0.5028680121232791	2				NaN	NaN	0	NaN	10562	4267	14827
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14837	39.009	NaN	4671.4	30	0	701.7	0.214	+			1299	AESTNILKL	9	75	494.7873293359125	987.560105738625	2	494.78729248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AESTNILKL_	CASP5|p.K187Rfs*33|1|0.29|ENSG00000137757|chr11:105002185-105002185|T/-|frameshift_variant;CASP5|p.N178Ifs*8|5|0.27|ENSG00000137757|chr11:105003284-105003284|T/-|frameshift_variant;ENSG00000137757|ENST00000260315|CASP5;nc|ENSG00000137757|P51878-2|CASP5;nc|ENSG00000137757|P51878-3|CASP5;nc|ENSG00000137757|P51878-5|CASP5;nc|ENSG00000137757|P51878-6|CASP5	79.71258880314673	0.09879134589249085	2				NaN	NaN	0	NaN	10565	4270	14836
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14838	39.013	NaN	6541.2	30	0	674.44	0.106	+			46192	VDWQIRQV	8	73	522.286927873579	1042.5593028139579	2	522.2857666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VDWQIRQV_	ENSG00000126522|ENST00000304874|ASL;nc|ENSG00000126522|P04424-2|ASL;nc|ENSG00000126522|P04424-3|ASL	64.20726635412375	0.4601301477144759	2				NaN	NaN	0	NaN	10566	4270	14836
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14839	39.015	NaN	7472.2	30	0	770	0.106	+			18541	ISMDLQLTNK	10	72	581.8107155709882	1161.6068782087764	2	581.81103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ISMDLQLTNK_	ENSG00000100280|ENST00000357586|AP1B1;ENST00000472057.1_1_22:29727525-29736761:-|nuORF;nc|ENSG00000100280|Q10567-2|AP1B1;nc|ENSG00000100280|Q10567-3|AP1B1;nc|ENSG00000100280|Q10567-4|AP1B1	180.09051358498644	0.001227893244234508	2				NaN	NaN	0	NaN	10567	4270	14836
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14840	39.016	NaN	5682.8	30	0	976.12	0.106			+	8045	DVAGSPKQTK	10	75	515.7790421179494	1029.5435313026987	2	516.2818603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DVAGSPKQTK_	REV__CCDC14|p.E558Rfs*13|1|0.03|ENSG00000175455|chr3:123931229-123931230|-/T|frameshift_variant;REV__CCDC14|p.E558Vfs*7|1|0.04|ENSG00000175455|chr3:123931228-123931229|-/TTGAATAA|frameshift_variant;REV__CCDC14|p.V615Afs*13|1|0.05|ENSG00000175455|chr3:123915674-123915675|-/TAATGAG|frameshift_variant;REV__ENSG00000175455|ENST00000409697|CCDC14;REV__ENST00000485949.5_1_3:123652514-123665686:-|nuORF;REV__ENST00000495381.5_1_3:123633936-123674711:-|nuORF;REV__nc|ENSG00000175455|Q49A88-2|CCDC14;REV__nc|ENSG00000175455|Q49A88-3|CCDC14;REV__nc|ENSG00000175455|Q49A88-4|CCDC14;REV__nc|ENSG00000175455|Q49A88-5|CCDC14;REV__nc|ENSG00000175455|Q49A88-6|CCDC14;REV__nc|ENSG00000175455|Q49A88|CCDC14	28.081489160057373	0.6505064946289502	2				NaN	NaN	0	NaN	10568	4270	14836
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14841	39.018	NaN	2725.6	30	0	756.28	0.106			+	23963	LDSVKFPVG	9	53	481.2709995691474	960.5274462050949	2	481.2709045410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LDSVKFPVG_	REV__ENSG00000158062|ENST00000374222|UBXN11;REV__nc|ENSG00000158062|Q5T124-2|UBXN11;REV__nc|ENSG00000158062|Q5T124-3|UBXN11;REV__nc|ENSG00000158062|Q5T124-4|UBXN11;REV__nc|ENSG00000158062|Q5T124-8|UBXN11	24.519189625965996	0.574102787014149	2				NaN	NaN	0	NaN	10569	4270	14836
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14842	39.02	NaN	1378	30	0	149.39	0.106	+			20709	KGRLKLPD	8	48	463.7928466796875	NaN	0	463.7928466796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KGRLKLPD_	EPHB1|p.G642D|1|0.24|ENSG00000154928|chr3:135192618-135192618|G/A|missense_variant	29.14955571784316	1.7418937515398478	2				NaN	NaN	0	NaN	10570	4270	14836
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14843	39.022	NaN	2073.8	30	0	136.8	0.034	+			1301	AESVSQQIL	9	53	487.76145435296274	973.5083557727255	2	487.7612609863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AESVSQQIL_	ENSG00000187051|ENST00000334678|RPS19BP1;ENST00000488602.1_1_22:39925499-39925935:-|nuORF	44.377184641726394	0.36891676396732553	2				NaN	NaN	0	NaN	10571	4270	14836
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14850	39.04	NaN	4945.7	30	0	414.57	0.214	+			33982	RSFQEDIK	8	70	511.7672178076279	1021.5198826820558	2	511.76837158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RSFQEDIK_	tr|U7ST27|U7ST27_FUSNUCarboxyl-terminalprocessingproteaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01258PE=3SV=1	101.25262130126117	0.2499877059228457	2				NaN	NaN	0	NaN	10575	4273	14849
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14851	39.043	NaN	4463.2	30	0	481.16	0.106	+			45638	TYRNVMEQF	9	72	594.2794488112263	1186.5443446892525	2	594.2796630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TYRNVMEQF_	BAIAP2L1|p.A287Lfs*11|2|0.27|ENSG00000006453|chr7:98310542-98310542|G/-|frameshift_variant;BAIAP2L1|p.F462Lfs*34|1|0.21|ENSG00000006453|chr7:98304232-98304232|A/-|frameshift_variant;BAIAP2L1|p.N24D|1|0.22|ENSG00000006453|chr7:98362414-98362414|T/C|missense_variant;BAIAP2L1|p.N36Ifs*6|1|0.24|ENSG00000006453|chr7:98362382-98362382|C/-|frameshift_variant;BAIAP2L1|p.P436Hfs*60|4|0.39|ENSG00000006453|chr7:98304311-98304311|G/-|frameshift_variant;ENSG00000006453|ENST00000005260|BAIAP2L1;ENST00000462558.5_1_7:97937677-98030347:-|nuORF	66.96192283764107	0.15557981141143568	2				NaN	NaN	0	NaN	10576	4273	14849
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14852	39.045	NaN	3352.6	30	0	434.65	0.106	+			11918	FVARGTVL	8	58	431.76086915711664	861.5071853810333	2	431.76055908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FVARGTVL_	ENSG00000159433|ENST00000290607|STARD9	47.91560031466742	0.6071945918984287	2				NaN	NaN	0	NaN	10577	4273	14849
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14853	39.047	NaN	6381.9	30	0	802.49	0.106	+			7464	DFVNDVYVY	9	72	567.2596570615722	1132.5047611899442	2	567.76123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DFVNDVYVY_	ENSG00000012779|ENST00000374391|ALOX5;ENST00000498461.1_1_10:45938876-45939636:+|nuORF;nc|ENSG00000012779|P09917-2|ALOX5;nc|ENSG00000012779|P09917-3|ALOX5	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	10578	4273	14849
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14854	39.049	NaN	3904.1	30	0	587.31	0.106	+			23920	LDLQVISPQP	10	71	555.3136893212502	1108.6128257093003	2	555.3143310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LDLQVISPQP_	ENSG00000144847|ENST00000393775|IGSF11;IGSF11|p.S339Lfs*36|1|0.06|ENSG00000144847|chr3:118902801-118902802|-/AG|frameshift_variant;nc|ENSG00000144847|Q5DX21-2|IGSF11	38.753607047826485	0.5606299674732264	2				NaN	NaN	0	NaN	10579	4273	14849
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14855	39.051	NaN	3579.2	30	0	292.16	0.106			+	-1	FMLPHCIAY	9	69	584.2697222017746	1166.524891470349	2	584.2689819335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),Oxidation (M)	_FM(Oxidation (M))LPHC(Carbamidomethyl (C))IAY_	REV__ENSG00000137252|ENST00000370862|HCRTR2	39.021493756699265	0.43173687394350213	2				NaN	NaN	0	NaN	10580	4273	14849
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14856	39.053	NaN	3011.9	30	0	378.58	0.038			+	50212	WMSVRWLLM	9	61	611.3177490234375	NaN	0	611.3177490234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_WMSVRWLLM_	REV__ENST00000570242.1_1_16:31283248-31284932:+|nuORF	29.14955571784316	0.3303970763161698	2				NaN	NaN	0	NaN	10581	4273	14849
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14863	39.071	NaN	6551	30	0	348.05	0.214	+			7160	DAFKSGIVQY	10	79	564.2903067940179	1126.5660606548356	2	564.2900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DAFKSGIVQY_	ENSG00000164307|ENST00000443439|ERAP1;ENST00000507859.1_1_5:96121490-96126328:-|nuORF;ERAP1|p.T584Qfs*21|1|0.21|ENSG00000164307|chr5:96786479-96786479|T/-|frameshift_variant;ERAP1|p.T768Nfs*53|1|0.2|ENSG00000164307|chr5:96781837-96781838|-/GAAAT|frameshift_variant;nc|ENSG00000164307|Q9NZ08-2|ERAP1	61.76455937419982	0.3497917639301274	2				NaN	NaN	0	NaN	10585	4276	14862
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14864	39.074	NaN	2787.8	30	0	273.25	0.106	+			42077	SYFALQVGK	9	62	506.77676505823473	1011.5389771832695	2	506.7764587402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SYFALQVGK_	ENSG00000085871|ENST00000265498|MGST2;ENST00000502587.1_1_4:140587164-140599797:+|nuORF;ENST00000515067.1_1_4:140587191-140608853:+|nuORF;MGST2|p.K103Nfs*8|2|0.22|ENSG00000085871|chr4:139703529-139703529|A/-|frameshift_variant;nc|ENSG00000085871|Q99735-2|MGST2	95.81516180277367	0.04847050768394289	2				NaN	NaN	0	NaN	10586	4276	14862
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14865	39.076	NaN	2671.8	30	0	772.14	0.106				-1	FFTPPLCDF	9	63	572.2609605624159	1142.5073681916317	2	572.2608642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_FFTPPLC(Carbamidomethyl (C))DF_	ENST00000481849.5_1_6:31321947-31322043:-|nuORF	30.503639358989545	0.5181749237905803	2				NaN	NaN	0	NaN	10587	4276	14862
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14866	39.078	NaN	3266.1	30	0	236.53	0.106			+	29881	PLKNNKYEP	9	70	551.7982566459638	1101.5819603587274	2	552.2994384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PLKNNKYEP_	REV__CTSA|p.F173Pfs*39|1|0.09|ENSG00000064601|chr20:45892795-45892796|TT/-|frameshift_variant	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	10588	4276	14862
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14867	39.08	NaN	890.75	30	0	121.23	0.033	+			43602	TILNLHAL	8	38	447.77401495307674	NaN	0	447.77374267578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TILNLHAL_	ENST00000337451.7_1_15:23027862-23033379:-|nuORF	26.79610172149135	1.7418937515398478	2				NaN	NaN	0	NaN	10589	4276	14862
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14872	39.094	NaN	4619.1	30	0	445.1	0.214	+			43324	TGASLADIMAK	11	72	539.2843999161538	1076.5542468991075	2	539.2841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TGASLADIMAK_	ENSG00000114391|ENST00000394077|RPL24;ENST00000446071.1_1_9:72832122-72832404:+|nuORF	122.93914200107957	0.014531093899805671	2				NaN	NaN	0	NaN	10591	4279	14871
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14873	39.098	NaN	1138.9	30	0	119.98	0.106	+			21077	KKLWAYLTI	9	41	379.2325744628906	NaN	0	379.2325744628906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KKLWAYLTI_	CON__Q9TRI1	26.69291269510374	0.34280015626154364	2				NaN	NaN	0	NaN	10592	4279	14871
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14874	39.1	NaN	3017.9	30	0	461.33	0.038	+			30251	PSYWTPGQTR	10	71	596.7905757150415	NaN	0	596.7897338867188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PSYWTPGQTR_	ENST00000578730.1_1_4:1245335-1281818:+|nuORF;ENST00000581398.1_1_4:1245404-1245611:+|nuORF	31.529811441608018	0.39664753963064203	2				NaN	NaN	0	NaN	10593	4279	14871
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14880	39.116	NaN	2658.4	30	0	379.17	0.214			+	35256	SALHKFTELM	10	77	588.8059996903263	1175.5974464474525	2	588.8057250976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SALHKFTELM_	REV__ENSG00000172000|ENST00000307635|ZNF556;REV__ZNF556|p.S52Vfs*20|1|0.05|ENSG00000172000|chr19:2876116-2876116|A/-|frameshift_variant	44.377184641726394	0.5088115166961078	2				NaN	NaN	0	NaN	10596	4282	14879
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14881	39.119	NaN	2549.8	30	0	213.39	0.035	+			29262	NYATRIVTL	9	69	525.8011265279582	1049.5877001227163	2	525.8023681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NYATRIVTL_	BIRC6|p.A1071Lfs*23|1|0.39|ENSG00000115760|chr2:32431053-32431053|G/-|frameshift_variant;BIRC6|p.I2261Yfs*13|1|0.3|ENSG00000115760|chr2:32476268-32476268|A/-|frameshift_variant;BIRC6|p.I914Yfs*2|1|0.07|ENSG00000115760|chr2:32416027-32416027|A/-|frameshift_variant;BIRC6|p.K3585Sfs*8|1|0.32|ENSG00000115760|chr2:32515171-32515171|A/-|frameshift_variant;BIRC6|p.P1736Qfs*17|1|0.37|ENSG00000115760|chr2:32464770-32464770|C/-|frameshift_variant;BIRC6|p.R1406Dfs*3|1|0.35|ENSG00000115760|chr2:32442431-32442431|C/-|frameshift_variant;BIRC6|p.S2648Ffs*25|1|0.08|ENSG00000115760|chr2:32487769-32487770|-/T|frameshift_variant;BIRC6|p.S3504Mfs*5|1|0.15|ENSG00000115760|chr2:32513095-32513098|TAGT/-|frameshift_variant;BIRC6|p.T1339Qfs*21|1|0.44|ENSG00000115760|chr2:32442131-32442131|A/-|frameshift_variant;ENSG00000115760|ENST00000421745|BIRC6	29.170058357718403	0.5306379469863586	2				NaN	NaN	0	NaN	10597	4282	14879
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14887	39.136	NaN	4890	30	0	1121.5	0.214				-1	 	0	53	336.5341033168387	1006.5804805507162	3	336.53411865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10600	4285	14886
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14888	39.139	NaN	2915.1	30	0	466.76	0.106	+			28956	NSDPNLHLL	9	67	511.7672178076279	1021.5198826820558	2	511.7676086425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NSDPNLHLL_	ENSG00000136830|ENST00000373312|NIBAN2;nc|ENSG00000136830|Q96TA1-2|NIBAN2	47.657333605630114	0.33044192980041115	2				NaN	NaN	0	NaN	10601	4285	14886
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14889	39.141	NaN	1972.6	30	0	191.44	0.106	+			51142	YNVLCDKY	8	58	509.23934796443933	1016.4641429956787	2	509.2395324707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YNVLCDKY_	CNOT6|p.A202V|1|0.39|ENSG00000113300|chr5:180565865-180565865|C/T|missense_variant;CNOT6|p.L251Wfs*2|1|0.09|ENSG00000113300|chr5:180567114-180567114|T/-|frameshift_variant;ENSG00000113300|ENST00000261951|CNOT6;ENSG00000138767|ENST00000504123|CNOT6L;nc|ENSG00000138767|Q96LI5-2|CNOT6L	47.91560031466742	0.6071945918984287	2				NaN	NaN	0	NaN	10602	4285	14886
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14890	39.143	NaN	2989.7	30	0	266.8	0.04	+			28459	NFPFRCRFPR	10	69	670.347463888353	1338.680374843506	2	670.8489379882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NFPFRCRFPR_	nc|ENSG00000129255|O75352-2|MPDU1	26.063383197487333	0.6669871633831898	2				NaN	NaN	0	NaN	10603	4285	14886
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14899	39.165	NaN	7458.6	30	0	744.14	0.215			+	9441	EKLDNLNPM	9	70	537.2687904006463	1072.5230278680924	2	537.2684936523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EKLDNLNPM_	REV__ENSG00000008086|ENST00000623535|CDKL5	56.72105179125745	0.24094814563026265	2				NaN	NaN	0	NaN	10609	4288	14898
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14900	39.168	NaN	2726.1	30	0	723.15	0.106				-1	 	0	57	490.28573058932443	489.27845412272444	1	490.28582763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10610	4288	14898
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14901	39.17	NaN	3043.3	30	0	456.59	0.106			+	-1	EHLAELAVLM	10	70	571.2978585288608	NaN	0	571.2980346679688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_EHLAELAVLM(Oxidation (M))_	REV__ENSG00000198208|ENST00000557413|RPS6KL1;REV__ENST00000553646.1_1_14:75375979-75376912:-|nuORF;REV__ENST00000555834.5_1_14:75375979-75389943:-|nuORF;REV__nc|ENSG00000198208|Q9Y6S9-2|RPS6KL1	44.116797842482775	0.3427969396372342	2				NaN	NaN	0	NaN	10611	4288	14898
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14902	39.172	NaN	2435	30	0	342.87	0.035			+	10128	ESPPHRPAL	9	63	502.2690436687012	1002.5235344042025	2	502.2687683105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ESPPHRPAL_	REV__ENST00000463226.1_1_3:113321250-113327360:+|nuORF	40.77816245573522	0.41113185337114944	2				NaN	NaN	0	NaN	10612	4288	14898
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14911	39.193	NaN	5475.8	30	0	456.21	0.214			+	-1	LFIRRMLT	8	73	533.3168725249948	NaN	0	533.3168334960938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LFIRRM(Oxidation (M))LT_	REV__ENSG00000134697|ENST00000373062|GNL2	50.0245360154114	1.7418937515398478	2				NaN	NaN	0	NaN	10618	4291	14910
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14912	39.197	NaN	3911.8	30	0	906.14	0.106			+	42716	TDFLTQAETI	10	70	569.7851608130752	1137.5557686929503	2	569.7852172851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TDFLTQAETI_	REV__DNAH2|p.K4326Rfs*84|3|0.27|ENSG00000183914|chr17:7832920-7832920|C/-|frameshift_variant;REV__DNAH2|p.Q4263Sfs*13|1|0.12|ENSG00000183914|chr17:7832639-7832639|C/-|frameshift_variant;REV__ENSG00000183914|ENST00000572933|DNAH2;REV__nc|ENSG00000183914|Q9P225-2|DNAH2	61.691277971877994	0.35045824941635534	2				NaN	NaN	0	NaN	10619	4291	14910
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14913	39.199	NaN	4109.8	30	0	411.56	0.106	+			27378	MKGLEVMAF	9	63	513.2613459947678	1024.5081390563355	2	513.2608032226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MKGLEVMAF_	ZAP70|p.P546L|1|0.45|ENSG00000115085|chr2:97738008-97738008|C/T|missense_variant	66.42927471994793	0.16001998865088202	2				NaN	NaN	0	NaN	10620	4291	14910
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14914	39.201	NaN	2741.2	30	0	292.42	0.106	+			43273	TFFRGSLE	8	59	478.7454783251824	955.4764037171648	2	478.7457275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TFFRGSLE_	ENSG00000158714|ENST00000289707|SLAMF8	60.97194046774394	0.49215940876911696	2				NaN	NaN	0	NaN	10621	4291	14910
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14915	39.203	NaN	2372.7	30	0	312.71	0.106	+			28947	NRVLVVDLG	9	59	492.7950134277344	NaN	0	492.7950134277344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NRVLVVDLG_	ENSG00000159788|ENST00000336727|RGS12;ENST00000502947.1_1_4:3317897-3344786:+|nuORF;nc|ENSG00000159788|O14924-4|RGS12;nc|ENSG00000159788|O14924-5|RGS12;RGS12|p.K1178Nfs*32|1|0.71|ENSG00000159788|chr4:3428672-3428672|A/-|frameshift_variant;RGS12|p.K869Sfs*2|1|0.44|ENSG00000159788|chr4:3417086-3417086|A/-|frameshift_variant;RGS12|p.N1124Hfs*23|1|0.3|ENSG00000159788|chr4:3428126-3428127|AG/-|frameshift_variant;RGS12|p.Q1292Rfs*49|1|0.23|ENSG00000159788|chr4:3430704-3430704|C/-|frameshift_variant;RGS12|p.Q1363Rfs*30|1|0.3|ENSG00000159788|chr4:3430923-3430923|C/-|frameshift_variant;RGS12|p.S435G|1|0.09|ENSG00000159788|chr4:3317473-3317473|A/G|missense_variant	34.172542307311794	0.30503706118289736	2				NaN	NaN	0	NaN	10622	4291	14910
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14916	39.204	NaN	2573.3	30	0	309.38	0.035			+	29194	NVMDICNQI	9	69	525.2401333281973	NaN	0	525.2401733398438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NVMDICNQI_	REV__ENSG00000145703|ENST00000274364|IQGAP2;REV__IQGAP2|p.K608Nfs*42|1|0.36|ENSG00000145703|chr5:76637072-76637072|A/-|frameshift_variant;REV__IQGAP2|p.Q1499Rfs*15|1|0.05|ENSG00000145703|chr5:76701201-76701202|-/CCGAG|frameshift_variant;REV__IQGAP2|p.T881Hfs*2|2|0.3|ENSG00000145703|chr5:76665133-76665133|A/-|frameshift_variant	49.44154591367651	0.21054156626303966	2				NaN	NaN	0	NaN	10623	4291	14910
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14926	39.226	NaN	14398	30	0	1791.6	0.214	+			42064	SYANVQDGF	9	75	500.72212431826557	999.4296957033312	2	500.721923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SYANVQDGF_	ENSG00000152766|ENST00000371930|ANKRD22	134.7655990226056	0.012935733000282069	2				NaN	NaN	0	NaN	10630	4294	14925
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14927	39.23	NaN	9247.9	30	0	1995.8	0.106	+			17862	IFTNTVARF	9	71	534.7958800844413	1067.5772072356824	2	534.79638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IFTNTVARF_	AKAP11|p.C1327Lfs*13|1|0.05|ENSG00000023516|chr13:42302724-42302725|-/CTTCTACTTTATAATC|frameshift_variant;AKAP11|p.F1607Sfs*48|1|0.11|ENSG00000023516|chr13:42303562-42303562|T/-|frameshift_variant;AKAP11|p.H1753Ifs*3|1|0.11|ENSG00000023516|chr13:42308589-42308589|T/-|frameshift_variant;AKAP11|p.H747Tfs*7|1|0.07|ENSG00000023516|chr13:42300981-42300981|T/-|frameshift_variant;AKAP11|p.N964Mfs*17|1|0.38|ENSG00000023516|chr13:42301633-42301633|A/-|frameshift_variant;AKAP11|p.S919Pfs*33|1|0.11|ENSG00000023516|chr13:42301498-42301498|T/-|frameshift_variant;ENSG00000023516|ENST00000025301|AKAP11	109.43880257439609	0.029570636687953285	2				NaN	NaN	0	NaN	10631	4294	14925
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14928	39.232	NaN	4233.8	30	0	348.93	0.106	+			35845	SEDEVKLAL	9	62	502.2690436687012	1002.5235344042025	2	502.26873779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEDEVKLAL_	ENSG00000169045|ENST00000393432|HNRNPH1;ENST00000513972.5_1_5:179047887-179050134:-|nuORF;ENST00000514332.5_1_5:179048171-179050134:-|nuORF;ENST00000524180.5_1_5:179047015-179050134:-|nuORF	39.252832667884924	0.4290233611298554	2				NaN	NaN	0	NaN	10632	4294	14925
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14929	39.234	NaN	3148.6	30	0	874.2	0.106	+			6679	AYVHMVTHF	9	58	368.8479682287666	1103.5220752864998	3	368.84796142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AYVHMVTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	26.79610172149135	0.5528238334041078	2				NaN	NaN	0	NaN	10633	4294	14925
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14930	39.235	NaN	4334.6	30	0	368.24	0.106				-1	GHGSFVNCGM	10	66	512.701481360128	1023.388409787056	2	512.7011108398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_GHGSFVNCGM(Oxidation (M))_	ENSG00000198917|ENST00000361256|SPOUT1	34.172542307311794	0.6007644933930345	2				NaN	NaN	0	NaN	10634	4294	14925
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14931	39.237	NaN	5435.8	30	0	496.38	0.106	+			10577	EYIRSLNQF	9	76	585.3022766521345	1168.590000371069	2	585.8046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EYIRSLNQF_	ENSG00000141452|ENST00000269221|RMC1;ENST00000589215.5_1_18:21087981-21111645:+|nuORF;ENST00000591367.5_1_18:21109371-21111665:+|nuORF	124.08010499294276	0.018729767491916592	2				NaN	NaN	0	NaN	10635	4294	14925
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14932	39.239	NaN	3584.4	30	0	332.46	0.034				-1	SMGAPRSLL	9	65	487.2592208440926	NaN	0	487.25897216796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SMGAPRSLL_	ARSA|p.G101Afs*7|1|0.13|ENSG00000100299|chr22:50627329-50627329|C/-|frameshift_variant;ARSA|p.H140Ifs*8|1|0.46|ENSG00000100299|chr22:50627213-50627213|G/-|frameshift_variant;ENSG00000100299|ENST00000216124|ARSA;ENST00000551731.1_1_22:51065464-51066207:-|nuORF	47.95952297671804	0.22075498469600283	2				NaN	NaN	0	NaN	10636	4294	14925
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14939	39.257	NaN	5594.7	30	0	650.83	0.214	+			30436	PYLRIEQF	8	68	533.2905297298265	1064.566506526453	2	533.2904663085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PYLRIEQF_	ENSG00000124257|ENST00000372518|NEURL2;NEURL2|p.C195Afs*63|1|0.37|ENSG00000124257|chr20:45890409-45890409|A/-|frameshift_variant	82.30502934623384	0.30436709589983096	2				NaN	NaN	0	NaN	10640	4297	14938
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14940	39.26	NaN	1912.1	30	0	331.33	0.106			+	25907	LSGKMTWL	8	53	468.2543899659683	934.4942269987366	2	468.2541198730469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSGKMTWL_	REV__ENST00000274364.10_1_5:75699116-75757478:+|nuORF	37.15910966729921	0.6739408393984688	2				NaN	NaN	0	NaN	10641	4297	14938
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14941	39.262	NaN	3417.7	30	0	209.28	0.04	+			23317	KYQEVTNNLEF	11	75	692.8421882867962	1383.6698236403922	2	692.8406372070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KYQEVTNNLEF_	ENSG00000135387|ENST00000341394|CAPRIN1;nc|ENSG00000135387|Q14444-2|CAPRIN1	67.74936324283564	0.2545025576448278	2				NaN	NaN	0	NaN	10642	4297	14938
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14954	39.29	NaN	3902.2	30	0	439.17	0.214			+	13063	GFFVIEPKM	9	68	542.2784470811754	1082.5423412291507	2	542.27880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_GFFVIEPKM(Oxidation (M))_	REV__ENSG00000096717|ENST00000212015|SIRT1;REV__nc|ENSG00000096717|Q96EB6-2|SIRT1	55.50420428727701	0.2510918378945873	2				NaN	NaN	0	NaN	10652	4300	14953
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14955	39.293	NaN	1750.2	30	0	471.63	0.106	+			46610	VFTGVVTKL	9	52	482.297220415275	962.57988789735	2	482.29754638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VFTGVVTKL_	CCAR1|p.E816Kfs*75|1|0.25|ENSG00000060339|chr10:68771347-68771347|A/-|frameshift_variant;CCAR1|p.Q181Kfs*2|1|0.31|ENSG00000060339|chr10:68747178-68747178|C/-|frameshift_variant;CCAR1|p.S739Vfs*11|1|0.47|ENSG00000060339|chr10:68765992-68765992|A/-|frameshift_variant;ENSG00000060339|ENST00000265872|CCAR1;nc|ENSG00000060339|Q8IX12-2|CCAR1	71.87747018426188	0.13267044672804276	2				NaN	NaN	0	NaN	10653	4300	14953
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14956	39.295	NaN	3438.5	30	0	553.16	0.106	+			26173	LSREVESLL	9	61	523.297350286687	1044.580147640174	2	523.297119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSREVESLL_	ENSG00000144045|ENST00000404568|DQX1;ENST00000473508.1_1_2:74750418-74753390:-|nuORF;nc|ENSG00000144045|Q8TE96-2|DQX1;nc|ENSG00000144045|Q8TE96-3|DQX1	65.46538089061403	0.16805504838372562	2				NaN	NaN	0	NaN	10654	4300	14953
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14957	39.297	NaN	3257.8	30	0	178.71	0.106	+			6594	AYLTLTSRM	9	66	528.2819420120214	1054.5493310908428	2	528.281494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AYLTLTSRM_	ENSG00000080345|ENST00000444746|RIF1;nc|ENSG00000080345|Q5UIP0-2|RIF1;RIF1|p.E1442Gfs*4|1|0.39|ENSG00000080345|chr2:151463835-151463836|-/A|frameshift_variant;RIF1|p.K1441Rfs*18|1|0.2|ENSG00000080345|chr2:151463836-151463836|A/-|frameshift_variant;RIF1|p.K1505Rfs*18|3|0.3|ENSG00000080345|chr2:151464027-151464027|A/-|frameshift_variant;RIF1|p.N245Kfs*2|1|0.44|ENSG00000080345|chr2:151422985-151422986|-/A|frameshift_variant;RIF1|p.S472Ffs*13|1|0.23|ENSG00000080345|chr2:151437275-151437276|-/T|frameshift_variant;RIF1|p.S472Pfs*34|1|0.3|ENSG00000080345|chr2:151437276-151437276|T/-|frameshift_variant;RIF1|p.S692Ffs*15|1|0.43|ENSG00000080345|chr2:151445419-151445420|-/T|frameshift_variant;RIF1|p.S692Qfs*10|1|0.13|ENSG00000080345|chr2:151445420-151445420|T/-|frameshift_variant	95.81516180277367	0.04847050768394289	2				NaN	NaN	0	NaN	10655	4300	14953
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14958	39.299	NaN	3194.4	30	0	386.1	0.106	+			41919	SVVISWHI	8	66	470.76618145579545	939.5178099783909	2	470.7652893066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVVISWHI_	SELL|p.W36Gfs*26|1|0.06|ENSG00000188404|chr1:169710455-169710455|C/-|frameshift_variant	35.200714571348534	0.6875396545722289	2				NaN	NaN	0	NaN	10656	4300	14953
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14959	39.301	NaN	2894	30	0	206.79	0.04				-1	CQECNNMLYPK	11	74	679.7800684883496	1357.545584043499	2	679.779541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_CQECNNM(Oxidation (M))LYPK_	ENSG00000105258|ENST00000221859|POLR2I;ENST00000586789.5_1_19:36605452-36605788:-|nuORF	21.68575002086885	0.7623253651248338	2				NaN	NaN	0	NaN	10657	4300	14953
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14960	39.301	NaN	2576	30	0	213.96	0.143	+			7748	DNELRICAR	9	70	545.2775987136906	NaN	0	545.2764282226562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DNELRICAR_	ENSG00000101347|ENST00000646673|SAMHD1;nc|ENSG00000101347|Q9Y3Z3-4|SAMHD1	37.81151784470057	0.28666463014928195	2				NaN	NaN	0	NaN	10658	4300	14953
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14965	39.318	NaN	4872.7	30	0	686.48	0.214	+			35066	SAFGNILSCK	10	75	548.7761831265418	NaN	0	548.7762451171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SAFGNILSC(Carbamidomethyl (C))K_	ENSG00000070756|ENST00000318607|PABPC1;ENSG00000090621|ENST00000372858|PABPC4;ENSG00000174740|ENST00000312600|PABPC5;ENSG00000184388|ENST00000373521|PABPC1L2B;ENSG00000186288|ENST00000373519|PABPC1L2A;nc|ENSG00000070756|P11940-2|PABPC1;nc|ENSG00000090621|Q13310-2|PABPC4;nc|ENSG00000090621|Q13310|PABPC4;nc|ENSG00000174740|Q96DU9-2|PABPC5;PABPC4|p.V294*|1|0.12|ENSG00000090621|chr1:39567843-39567843|C/-|frameshift_variant;PABPC5|p.Y222Ffs*6|1|0.06|ENSG00000174740|chrX:91436241-91436242|-/TTGA|frameshift_variant	77.53327743719008	0.11160061521804975	2				NaN	NaN	0	NaN	10660	4303	14964
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14966	39.321	NaN	2849.9	30	0	321.27	0.106	+			18187	IMAHCRLE	8	60	515.2540765982707	1028.4936002633412	2	515.2542724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_IMAHC(Carbamidomethyl (C))RLE_	AluJo_dup65935|chr17:47951181-47951484:-|3.1232314964255035|0.4639684686261284|2.75|483.0|22|3|anti-sense	57.81127852772723	0.5234495074909924	2				NaN	NaN	0	NaN	10661	4303	14964
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14967	39.323	NaN	3075.8	30	0	278.68	0.106	+			33760	RPTDVAISF	9	62	503.2721164126458	1004.5296798920916	2	503.27166748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RPTDVAISF_	ENSG00000052749|ENST00000370992|RRP12;nc|ENSG00000052749|Q5JTH9-2|RRP12;nc|ENSG00000052749|Q5JTH9-3|RRP12	40.77816245573522	0.41113185337114944	2				NaN	NaN	0	NaN	10662	4303	14964
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14968	39.325	NaN	2701.3	30	0	241.51	0.034	+			11933	FVGVHVRR	8	62	485.2900627515367	968.5655725698734	2	485.28985595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FVGVHVRR_	ENSG00000174951|ENST00000645652|FUT1;ENSG00000176920|ENST00000425340|FUT2;ENST00000430145.3_1_19:49166463-49183997:+|nuORF;FUT1|p.R212C|1|0.36|ENSG00000174951|chr19:48750648-48750648|G/A|missense_variant	35.200714571348534	0.6875396545722289	2				NaN	NaN	0	NaN	10663	4303	14964
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14977	39.347	NaN	11093	30	0	1433.1	0.214	+			49942	VYVQNVVKL	9	77	531.3216914182858	1060.6288299033715	2	531.3213500976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYVQNVVKL_	AP3D1|p.A531T|1|0.3|ENSG00000065000|chr19:2118723-2118723|C/T|missense_variant;ENSG00000065000|ENST00000643116|AP3D1;nc|ENSG00000065000|O14617-2|AP3D1;nc|ENSG00000065000|O14617-3|AP3D1;nc|ENSG00000065000|O14617-4|AP3D1;nc|ENSG00000065000|O14617|AP3D1	124.59426212874841	0.018418509520798258	2				NaN	NaN	0	NaN	10669	4306	14976
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14978	39.35	NaN	6278.5	30	0	1566.6	0.106	+			28458	NFPDEMEAQIN	11	82	654.2830358977301	1306.55151886226	2	654.283447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NFPDEMEAQIN_	tr|U7SGG1|U7SGG1_FUSNUToxin-antitoxinsystemYwqKfamilyantitoxin(Fragment)OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02208PE=4SV=1;tr|U7T3F2|U7T3F2_FUSNUPhophatidylinositol-4-phosphate5-kinaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00619PE=4SV=1	58.22992032128504	0.3392555181951113	2				NaN	NaN	0	NaN	10670	4306	14976
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14979	39.352	NaN	6009	30	0	514.76	0.106	+			50799	YEQILNTKL	9	75	561.3136805404562	1120.6128081477123	2	561.3141479492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YEQILNTKL_	ENSG00000174574|ENST00000432648|AKIRIN1	94.4091291819064	0.0524345700464502	2				NaN	NaN	0	NaN	10671	4306	14976
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14980	39.354	NaN	2912	30	0	276.37	0.106			+	10923	FDLLCQPKY	9	64	563.7828323692822	NaN	0	563.7830200195312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FDLLCQPKY_	REV__PLEKHM2|p.Y174C|1|0.21|ENSG00000116786|chr1:15719789-15719789|A/G|missense_variant	42.396135135203025	0.2590952873412954	2				NaN	NaN	0	NaN	10672	4306	14976
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14981	39.356	NaN	1328.5	30	0	79.386	0.106				-1	TTIIASRTYLM	11	51	429.2330764114188	NaN	0	428.7601013183594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_TTIIASRTYLM(Oxidation (M))_	tr|U7T2T6|U7T2T6_FUSNUMATEfamilymultidrugresistanceproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00453PE=4SV=1	36.31764250033197	0.4035636655321173	2				NaN	NaN	0	NaN	10673	4306	14976
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14982	39.357	NaN	1746.1	30	0	171.22	0.106			+	-1	CCCDDEHD	8	48	384.77204859380646	NaN	0	384.7715148925781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term),3 Carbamidomethyl (C)	_(Acetyl (Protein N-term))C(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))DDEHD_	REV__ENSG00000198854|ENST00000368775|C1orf68	12.206847966760668	1.7418937515398478	2				NaN	NaN	0	NaN	10674	4306	14976
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14983	39.359	NaN	3223.9	30	0	254.08	0.035	+			23533	LAIILGISSK	10	69	507.831551178036	1013.6485494228721	2	507.8324279785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LAIILGISSK_	ENSG00000135048|ENST00000377044|CEMIP2;nc|ENSG00000135048|Q9UHN6-2|CEMIP2	42.86426827375447	0.522752283233888	2				NaN	NaN	0	NaN	10675	4306	14976
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14990	39.376	NaN	2221.4	30	0	241.75	0.214	+			43511	TGSLLLSAVL	10	58	487.3001579638887	972.5857629945774	2	487.2997131347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TGSLLLSAVL_	nc|ENSG00000106331|O43316-2|PAX4	49.44154591367651	0.46214596422418036	2				NaN	NaN	0	NaN	10679	4309	14989
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14991	39.379	NaN	1698.1	30	0	860.83	0.106	+			37714	SLSSTTRS	8	35	419.7164383190973	837.4183237049946	2	419.7158508300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLSSTTRS_	ENST00000308964.7_1_19:56159479-56159569:+|nuORF;REV__ENST00000343110.2_1_1:203452523-203452736:+|nuORF;REV__PRELP|p.P81Lfs*61|1|0.33|ENSG00000188783|chr1:203483421-203483421|C/-|frameshift_variant	12.959181472943097	0.7887000251064199	2				NaN	NaN	0	NaN	10680	4309	14989
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	14992	39.381	NaN	2653.6	30	0	542.38	0.035			+	-1	VLMKKGVGSP	10	65	516.3013634148392	NaN	0	516.3008422851562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_VLM(Oxidation (M))KKGVGSP_	REV__ENSG00000132321|ENST00000409907|IQCA1;REV__IQCA1|p.N612Kfs*25|1|0.24|ENSG00000132321|chr2:236363813-236363814|-/T|frameshift_variant;REV__nc|ENSG00000132321|Q86XH1-2|IQCA1;REV__nc|ENSG00000132321|Q86XH1-5|IQCA1	54.776311868738084	0.27540594196716844	2				NaN	NaN	0	NaN	10681	4309	14989
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15004	39.406	NaN	7910.1	30	0	872.77	0.214	+			23951	LDSAFSQLQS	10	68	548.2693271542574	1094.5241013753148	2	548.7720336914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LDSAFSQLQS_	CHST3|p.G178Afs*38|1|0.33|ENSG00000122863|chr10:72007559-72007559|G/-|frameshift_variant;ENSG00000122863|ENST00000373115|CHST3	51.19269402634007	0.44601001148513897	2				NaN	NaN	0	NaN	10690	4312	15003
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15005	39.409	NaN	3600.6	30	0	335.63	0.106	+			28254	NDIVVKVL	8	55	450.28171424855526	898.5488755639105	2	450.28143310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NDIVVKVL_	ENSG00000166333|ENST00000299421|ILK;nc|ENSG00000166333|Q13418-2|ILK;nc|ENSG00000166333|Q13418-3|ILK	122.1759843771914	0.23144439946795717	2				NaN	NaN	0	NaN	10691	4312	15003
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15006	39.411	NaN	3486.5	30	0	333.11	0.106			+	23549	LAKTLEAAL	9	60	465.28689400823276	928.5592350832655	2	465.78814697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LAKTLEAAL_	REV__ENSG00000165060|ENST00000484259|FXN;REV__ENST00000396366.6_1_9:71679930-71687675:+|nuORF;REV__ENST00000411625.2_1_9:127730575-127731109:-|nuORF	49.44154591367651	0.3095138337212152	2				NaN	NaN	0	NaN	10692	4312	15003
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15007	39.413	NaN	3933.7	30	0	713.5	0.106			+	18758	ITMKDPLGAP	10	68	521.7823396817569	1041.5501264303136	2	521.78271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ITMKDPLGAP_	REV__ENSG00000115464|ENST00000398571|USP34;REV__nc|ENSG00000115464|Q70CQ2-2|USP34;REV__nc|ENSG00000115464|Q70CQ2-3|USP34;REV__USP34|p.L2716Sfs*30|1|0.05|ENSG00000115464|chr2:61214596-61214597|-/AAGCTGA|frameshift_variant;REV__USP34|p.L3228*|1|0.22|ENSG00000115464|chr2:61190564-61190564|A/-|frameshift_variant	44.377184641726394	0.5088115166961078	2				NaN	NaN	0	NaN	10693	4312	15003
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15008	39.415	NaN	2476.4	30	0	333.66	0.106			+	17117	HSLLLAAGDW	10	63	541.7854151917053	1081.5562774502105	2	541.785400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HSLLLAAGDW_	REV__TAF6L|p.R264W|1|0.49|ENSG00000162227|chr11:62782296-62782296|C/T|missense_variant	26.69291269510374	0.6618461711292317	2				NaN	NaN	0	NaN	10694	4312	15003
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15009	39.417	NaN	3442	30	0	825.95	0.106	+			19660	KDLPSLSPY	9	63	510.27213849600435	NaN	0	510.272705078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KDLPSLSPY_	ENSG00000111335|ENST00000392583|OAS2;nc|ENSG00000111335|P29728|OAS2;OAS2|p.D514Gfs*41|1|0.05|ENSG00000111335|chr12:113006482-113006483|-/G|frameshift_variant;OAS2|p.N426Tfs*14|1|0.74|ENSG00000111335|chr12:113005025-113005025|A/-|frameshift_variant	32.81241826257853	0.3119040447479903	2				NaN	NaN	0	NaN	10695	4312	15003
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15010	39.419	NaN	3825.9	30	0	479.92	0.038	+			48670	VTSTESMDFLK	11	70	629.3047217408117	1256.5948905484233	2	629.3050537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VTSTESMDFLK_	ENSG00000078618|ENST00000352171|NRDC;nc|ENSG00000078618|O43847-2|NRDC	65.15724298150197	0.2774196309614691	2				NaN	NaN	0	NaN	10696	4312	15003
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15018	39.438	NaN	5362.7	30	0	1977.5	0.214	+			43846	TLVAAFRTR	9	67	517.8084684407688	1033.6023839483375	2	517.8084106445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TLVAAFRTR_	ENST00000311637.9_2_20:50216404-50216899:-|nuORF	27.882242232435846	0.5426732730940306	2				NaN	NaN	0	NaN	10701	4315	15017
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15019	39.442	NaN	4057.1	30	0	280.69	0.106	+			49712	VYMELSQKL	9	70	555.7967412430505	1109.578929552901	2	555.7970581054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYMELSQKL_	ENSG00000139926|ENST00000344768|FRMD6;FRMD6|p.K193Rfs*5|1|0.41|ENSG00000139926|chr14:51708091-51708091|G/-|frameshift_variant;nc|ENSG00000139926|Q96NE9-2|FRMD6	82.7504851949679	0.08565546331141553	2				NaN	NaN	0	NaN	10702	4315	15017
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15020	39.444	NaN	4146.9	30	0	337.13	0.106				-1	 	0	60	523.3062438071635	1044.5979346811268	2	522.8062133789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10703	4315	15017
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15021	39.446	NaN	2161.9	30	0	468.42	0.033				-1	 	0	47	436.7797246851547	871.5448964371094	2	436.781494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10704	4315	15017
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15029	39.465	NaN	6179.2	30	0	544.07	0.214			+	-1	CVSVSHGCTL	10	80	560.2488147898271	1118.483076646454	2	560.249267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))VSVSHGC(Carbamidomethyl (C))TL_	REV__ENST00000475965.1_1_22:50686143-50686750:-|nuORF	47.657333605630114	0.47858658696240314	2				NaN	NaN	0	NaN	10709	4318	15028
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15030	39.469	NaN	4873.4	30	0	569.06	0.106				-1	ICHPLKYM	8	74	539.2632313117973	1076.5119096903945	2	539.2642822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_IC(Carbamidomethyl (C))HPLKYM(Oxidation (M))_	ENSG00000188124|ENST00000641124|OR2AG2	62.97842346883844	0.4722955155785405	2				NaN	NaN	0	NaN	10710	4318	15028
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15031	39.471	NaN	3182.4	30	0	339.57	0.036			+	10936	FDSFLEGFK	9	69	545.2680799608313	1088.5216069884625	2	545.7695922851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FDSFLEGFK_	REV__ENSG00000184634|ENST00000374080|MED12;REV__MED12|p.E1337Kfs*8|1|0.26|ENSG00000184634|chrX:71130173-71130173|G/-|frameshift_variant;REV__nc|ENSG00000184634|Q93074-2|MED12;REV__nc|ENSG00000184634|Q93074-3|MED12	51.33545320467046	0.2872990594074956	2				NaN	NaN	0	NaN	10711	4318	15028
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15038	39.489	NaN	4963.9	30	0	833.15	0.214				-1	 	0	57	336.5341033168387	1006.5804805507162	3	336.5342102050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10715	4321	15037
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15039	39.492	NaN	1994.1	30	0	354.66	0.106	+			49347	VVSNHYGGM	9	56	482.22160632026953	962.4286597073391	2	482.72210693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVSNHYGGM_	USP15|p.A879V|1|0.39|ENSG00000135655|chr12:62396360-62396360|C/T|missense_variant	24.20275056022122	0.577060078256802	2				NaN	NaN	0	NaN	10716	4321	15037
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15040	39.494	NaN	2831.3	30	0	305.3	0.037			+	24299	LFDDMQTTY	9	72	567.2436961637263	NaN	0	567.2438354492188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LFDDMQTTY_	REV__ENSG00000127831|ENST00000248444|VIL1;REV__nc|ENSG00000127831|P09327-2|VIL1	35.61828744233558	0.29773779453147337	2				NaN	NaN	0	NaN	10717	4321	15037
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15046	39.509	NaN	5309.7	30	0	547.42	0.214	+			28993	NSMGLFLQK	9	62	519.2761296659884	1036.5377063987767	2	519.2767944335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NSMGLFLQK_	ENSG00000079459|ENST00000220584|FDFT1;ENST00000446331.6_1_8:11660331-11696115:+|nuORF;FDFT1|p.N215S|1|0.21|ENSG00000079459|chr8:11826157-11826157|A/G|missense_variant;nc|ENSG00000079459|P37268-2|FDFT1;nc|ENSG00000079459|P37268-3|FDFT1;nc|ENSG00000079459|P37268-4|FDFT1;nc|ENSG00000079459|P37268-5|FDFT1	115.49404669440601	0.023927554121326553	2				NaN	NaN	0	NaN	10720	4324	15045
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15047	39.513	NaN	2839.3	30	0	678.02	0.106	+			12074	GAAGVHFIY	9	61	467.7427842087982	933.4710154843964	2	467.7420959472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GAAGVHFIY_	ENSG00000169813|ENST00000682386|HNRNPF	39.021493756699265	0.43173687394350213	2				NaN	NaN	0	NaN	10721	4324	15045
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15048	39.515	NaN	2596.5	30	0	338.96	0.106			+	12028	FYEEWGADSG	10	64	580.7309249228904	1159.4472969125807	2	580.73095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FYEEWGADSG_	REV__ENSG00000101343|ENST00000536226|CRNKL1;REV__nc|ENSG00000101343|Q9BZJ0-3|CRNKL1;REV__nc|ENSG00000101343|Q9BZJ0|CRNKL1	23.04248740728303	0.69165701907106	2				NaN	NaN	0	NaN	10722	4324	15045
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15049	39.516	NaN	1814	30	0	226.01	0.106			+	24697	LHEELHVF	8	52	512.2659221167103	NaN	0	512.2637939453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LHEELHVF_	REV__MED10|p.D6V|1|0.19|ENSG00000133398|chr5:6378467-6378467|T/A|missense_variant	52.29916861842294	1.7418937515398478	2				NaN	NaN	0	NaN	10723	4324	15045
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15050	39.518	NaN	2402.5	30	0	268.78	0.037				-1	ECELFAYGGC	10	64	574.7247924804688	NaN	0	574.7247924804688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_ECELFAYGGC(Carbamidomethyl (C))_	ENSG00000101446|ENST00000217428|SPINT3	37.15910966729921	0.3781637092648983	2				NaN	NaN	0	NaN	10724	4324	15045
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15059	39.54	NaN	3822.9	30	0	1035.7	0.214			+	36901	SIHLLELNS	9	67	513.2854847602883	1024.5564165873766	2	513.2857666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIHLLELNS_	REV__ENSG00000204414|ENST00000309894|CSHL1;REV__nc|ENSG00000204414|Q14406-2|CSHL1;REV__nc|ENSG00000204414|Q14406-3|CSHL1;REV__nc|ENSG00000204414|Q14406-4|CSHL1	37.81151784470057	0.4459294069877048	2				NaN	NaN	0	NaN	10730	4327	15058
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15060	39.543	NaN	3244.5	30	0	321.79	0.106	+			15347	GTVLYSLVK	9	59	490.2946190177742	978.5746851023484	2	490.29364013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTVLYSLVK_	ENSG00000083857|ENST00000441802|FAT1;FAT1|p.G2934Vfs*3|2|0.37|ENSG00000083857|chr4:186617787-186617787|T/-|frameshift_variant;FAT1|p.N3847Yfs*7|1|0.03|ENSG00000083857|chr4:186601370-186601371|-/TTATA|frameshift_variant;FAT1|p.P3228Lfs*42|1|0.27|ENSG00000083857|chr4:186611556-186611556|G/-|frameshift_variant;FAT1|p.P4313Lfs*36|1|0.34|ENSG00000083857|chr4:186596602-186596602|G/-|frameshift_variant;FAT1|p.Q2933Hfs*14|1|0.33|ENSG00000083857|chr4:186617787-186617788|-/G|frameshift_variant	82.7504851949679	0.08565546331141553	2				NaN	NaN	0	NaN	10731	4327	15058
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15061	39.545	NaN	3238.1	30	0	326.04	0.106			+	47256	VMREVPTLL	9	66	529.307515007718	1056.600477082236	2	529.3074340820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VMREVPTLL_	REV__ENST00000521825.1_1_8:143353010-143361338:-|nuORF	65.46538089061403	0.16805504838372562	2				NaN	NaN	0	NaN	10732	4327	15058
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15062	39.547	NaN	2677.5	30	0	372.96	0.106			+	10046	ESDFNNGIN	9	59	505.2140762967981	1008.4135996603962	2	505.2140197753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ESDFNNGIN_	REV__CBLN1|p.P107Rfs*13|1|0.31|ENSG00000102924|chr16:49280987-49280987|G/-|frameshift_variant;REV__ENSG00000102924|ENST00000219197|CBLN1	40.77816245573522	0.41113185337114944	2				NaN	NaN	0	NaN	10733	4327	15058
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15063	39.549	NaN	2066.5	30	0	172.58	0.036	+			50473	YAGYPHIHF	9	63	552.7692516268019	NaN	0	552.7683715820312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YAGYPHIHF_	tr|U7STY1|U7STY1_FUSNUCobyrinatea,c-diamidesynthaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=cbiAPE=3SV=1	39.021493756699265	0.2805557132942146	2				NaN	NaN	0	NaN	10734	4327	15058
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15068	39.563	NaN	11977	30	0	898.97	0.214			+	27896	MTRGRLRVG	9	82	523.3062438071635	1044.5979346811268	2	523.3065185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MTRGRLRVG_	REV__ENST00000586568.1_1_18:47809883-47810144:-|nuORF	32.81241826257853	0.4965981579233955	2				NaN	NaN	0	NaN	10736	4330	15067
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15069	39.567	NaN	4828.6	30	0	443.17	0.037			+	50969	YIIQPFEPK	9	77	567.8114709972773	1133.6083890613545	2	567.8116455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YIIQPFEPK_	REV__USP28|p.L386P|1|0.27|ENSG00000048028|chr11:113827263-113827263|A/G|missense_variant	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	10737	4330	15067
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15077	39.585	NaN	5001.4	30	0	482.93	0.214	+			28961	NSEKIITFQ	9	79	540.288598344241	1078.562643755282	2	540.2903442382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NSEKIITFQ_	ENSG00000172752|ENST00000373157|COL6A5;nc|ENSG00000172752|A8TX70-2|COL6A5;nc|ENSG00000172752|A8TX70|COL6A5	63.42647028704847	0.1850514934184437	2				NaN	NaN	0	NaN	10742	4333	15076
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15078	39.589	NaN	4705.2	30	0	459.26	0.106			+	27462	MLNRITELV	9	73	544.8108447210477	1087.6071365088953	2	544.8102416992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MLNRITELV_	REV__AQR|p.K1234Sfs*17|1|0.35|ENSG00000021776|chr15:34870819-34870819|T/-|frameshift_variant;REV__AQR|p.K759Rfs*19|1|0.27|ENSG00000021776|chr15:34897678-34897678|T/-|frameshift_variant;REV__ENSG00000021776|ENST00000156471|AQR;REV__ENST00000543879.6_1_15:35166876-35196659:-|nuORF	53.08895987439943	0.27122541748218487	2				NaN	NaN	0	NaN	10743	4333	15076
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15079	39.591	NaN	2896.3	30	0	948.11	0.106	+			46900	VISMHSRTT	9	62	516.2692679006215	1030.5239828680428	2	516.2696533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VISMHSRTT_	nc|ENSG00000223519|B7ZC32|KIF28P	29.14955571784316	0.5308295550522326	2				NaN	NaN	0	NaN	10744	4333	15076
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15080	39.593	NaN	2136.2	30	0	161.58	0.106			+	15603	GVISIGLSVN	10	55	479.7819404623242	957.5493279914484	2	479.78179931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GVISIGLSVN_	REV__ENSG00000132849|ENST00000642238|PATJ;REV__ENST00000459752.5_1_1:62228564-62579919:+|nuORF;REV__ENST00000484562.5_1_1:62228564-62579919:+|nuORF;REV__nc|ENSG00000132849|Q8NI35-2|PATJ;REV__nc|ENSG00000132849|Q8NI35-3|PATJ;REV__nc|ENSG00000132849|Q8NI35-4|PATJ;REV__nc|ENSG00000132849|Q8NI35-5|PATJ;REV__nc|ENSG00000132849|Q8NI35|PATJ	39.252832667884924	0.5560298534376815	2				NaN	NaN	0	NaN	10745	4333	15076
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15081	39.594	NaN	2711.2	30	0	366.04	0.106	+			12011	FVYSFSPVAG	10	61	537.2687904006463	1072.5230278680924	2	537.2692260742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FVYSFSPVAG_	ENSG00000196199|ENST00000361479|MPHOSPH8	37.15910966729921	0.575322462179216	2				NaN	NaN	0	NaN	10746	4333	15076
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15082	39.596	NaN	2704.2	30	0	540.39	0.037			+	-1	VRMNHLMTA	9	52	368.8479682287666	1103.5220752864998	3	368.84808349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Oxidation (M)	_VRM(Oxidation (M))NHLM(Oxidation (M))TA_	REV__SLC12A7|p.A246T|1|0.23|ENSG00000113504|chr5:1085413-1085413|C/T|missense_variant	26.69291269510374	0.5537881896960711	2				NaN	NaN	0	NaN	10747	4333	15076
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15088	39.612	NaN	4787.6	30	0	1033.6	0.214			+	7806	DPKTVRAL	8	55	450.26907253445324	898.5235921357065	2	450.2688293457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DPKTVRAL_	REV__ENSG00000088053|ENST00000310373|GP6	87.75429964447693	0.2842685068779738	2				NaN	NaN	0	NaN	10750	4336	15087
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15089	39.616	NaN	6183.7	30	0	329.92	0.106	+			42191	TAADIFKQY	9	73	528.7719117360276	1055.5292705388551	2	528.7718505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAADIFKQY_	ENSG00000101972|ENST00000371145|STAG2;nc|ENSG00000101972|Q8N3U4|STAG2;STAG2|p.T1208Kfs*3|1|0.87|ENSG00000101972|chrX:124095400-124095400|C/-|frameshift_variant	101.25262130126117	0.03792372629710479	2				NaN	NaN	0	NaN	10751	4336	15087
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15090	39.618	NaN	2077.3	30	0	295.21	0.106			+	51381	YTLKVAAPI	9	67	488.29778870967687	NaN	0	488.2976379394531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YTLKVAAPI_	REV__ENSG00000104517|ENST00000520539|UBR5;REV__nc|ENSG00000104517|O95071-2|UBR5;REV__UBR5|p.E2121Kfs*28|1|0.39|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant;REV__UBR5|p.E2121Rfs*13|1|0.28|ENSG00000104517|chr8:102277120-102277121|-/T|frameshift_variant;REV__UBR5|p.F2571Lfs*4|2|0.31|ENSG00000104517|chr8:102262044-102262044|A/-|frameshift_variant;REV__UBR5|p.K2120Rfs*13|1|0.24|ENSG00000104517|chr8:102277121-102277122|TT/-|frameshift_variant	42.86426827375447	0.2558691296974908	2				NaN	NaN	0	NaN	10752	4336	15087
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15091	39.62	NaN	2085.2	30	0	383.33	0.106				-1	HVYNGQVM	8	53	482.22160632026953	962.4286597073391	2	482.2220153808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_HVYNGQVM(Oxidation (M))_	ENSG00000170364|ENST00000358065|SETMAR;nc|ENSG00000170364|Q53H47-2|SETMAR	29.841539824830324	0.7289191502596711	2				NaN	NaN	0	NaN	10753	4336	15087
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15092	39.621	NaN	2130.8	30	0	338.06	0.037			+	8637	EDIFNILHK	9	61	564.8060449247963	1127.5975369163925	2	564.8056030273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EDIFNILHK_	REV__tr|U7STI4|U7STI4_FUSNUM18familyaminopeptidaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01357PE=3SV=1	32.81241826257853	0.4965981579233955	2				NaN	NaN	0	NaN	10754	4336	15087
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15099	39.638	NaN	1779.5	30	0	429.71	0.214	+			35110	SAGGPALL	8	45	343.19761571410726	NaN	0	343.1976318359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAGGPALL_	ENSG00000100241|ENST00000380817|SBF1;nc|ENSG00000100241|O95248-4|SBF1;nc|ENSG00000100241|O95248|SBF1;SBF1|p.L946Wfs*16|1|0.26|ENSG00000100241|chr22:50461526-50461526|G/-|frameshift_variant;SBF1|p.S1077Afs*28|3|0.34|ENSG00000100241|chr22:50460327-50460327|G/-|frameshift_variant;SBF1|p.S1077Qfs*11|2|0.34|ENSG00000100241|chr22:50460326-50460327|-/G|frameshift_variant	21.70233525837049	1.7418937515398478	2				NaN	NaN	0	NaN	10758	4339	15098
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15100	39.641	NaN	3566.8	30	0	731.85	0.106			+	27424	MLAPAGALN	9	58	429.22986473526515	856.4451765373303	2	429.2292785644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MLAPAGALN_	REV__ALDH4A1|p.A481Qfs*17|1|0.41|ENSG00000159423|chr1:18875401-18875401|C/-|frameshift_variant;REV__ENSG00000159423|ENST00000375341|ALDH4A1;REV__ENST00000454547.1_1_1:19209079-19212092:-|nuORF;REV__ENST00000494072.3_3_1:19186098-19209913:-|nuORF;REV__nc|ENSG00000159423|P30038-2|ALDH4A1;REV__nc|ENSG00000159423|P30038-3|ALDH4A1	40.5726180659479	0.4135428067754104	2				NaN	NaN	0	NaN	10759	4339	15098
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15101	39.643	NaN	5081.2	30	0	1071.7	0.106	+			4702	ATLTNILEH	9	66	506.2770014070107	1010.5394498808214	2	506.27691650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATLTNILEH_	ENSG00000140853|ENST00000688547|NLRC5;nc|ENSG00000140853|Q86WI3-2|NLRC5;nc|ENSG00000140853|Q86WI3-3|NLRC5;nc|ENSG00000140853|Q86WI3-4|NLRC5;nc|ENSG00000140853|Q86WI3-5|NLRC5;nc|ENSG00000140853|Q86WI3-6|NLRC5;NLRC5|p.E662D|1|0.4|ENSG00000140853|chr16:57026929-57026929|G/T|missense_variant;NLRC5|p.H1717Ifs*29|2|0.41|ENSG00000140853|chr16:57079112-57079112|C/-|frameshift_variant;NLRC5|p.P816Rfs*30|1|0.28|ENSG00000140853|chr16:57031430-57031430|C/-|frameshift_variant	115.49404669440601	0.023927554121326553	2				NaN	NaN	0	NaN	10760	4339	15098
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15102	39.645	NaN	2051.9	30	0	506.85	0.106	+			27171	MDGFALGR	8	42	433.71327716519966	NaN	0	433.7135009765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MDGFALGR_	ECHDC2|p.G139R|1|0.24|ENSG00000121310|chr1:52906561-52906561|C/T|missense_variant	25.450171626174864	1.7418937515398478	2				NaN	NaN	0	NaN	10761	4339	15098
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15103	39.647	NaN	1410.5	30	0	160.64	0.106			+	14042	GSGYANRL	8	44	419.2125112257451	836.4104695182903	2	419.21136474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GSGYANRL_	REV__tr|U7T514|U7T514_FUSNUAbortiveinfectionprotein-likeC-terminaldomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00270PE=4SV=1	38.80614096846853	0.6637206697844082	2				NaN	NaN	0	NaN	10762	4339	15098
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15104	39.649	NaN	2213.4	30	0	462.51	0.106	+			11163	FGPGPGSNF	9	45	440.203434700919	878.392316468638	2	440.20281982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FGPGPGSNF_	ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;ENST00000495810.1_1_7:26235422-26236427:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1	51.33545320467046	0.2872990594074956	2				NaN	NaN	0	NaN	10763	4339	15098
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15105	39.651	NaN	1102.6	30	0	159.48	0.034			+	45226	TVPIAALGVS	10	45	464.2781677246094	NaN	0	464.2781677246094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TVPIAALGVS_	REV__ENSG00000136895|ENST00000373387|GARNL3;REV__ENST00000481242.5_1_9:130127572-130155530:+|nuORF;REV__ENST00000496711.5_1_9:130126995-130155530:+|nuORF;REV__nc|ENSG00000136895|Q5VVW2-4|GARNL3;REV__nc|ENSG00000136895|Q5VVW2-5|GARNL3	34.172542307311794	0.38797011891751465	2				NaN	NaN	0	NaN	10764	4339	15098
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15117	39.686	NaN	2690	30	0	379.82	0.214				-1	 	0	50	349.2645169698986	696.5144810065972	2	349.2647399902344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10770	4345	15116
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15118	39.69	NaN	1801.1	30	0	321.38	0.106			+	16602	HGKNQNVI	8	53	455.2483676890751	NaN	0	455.2481384277344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HGKNQNVI_	REV__ENSG00000197619|ENST00000598071|ZNF615;REV__nc|ENSG00000197619|Q8N8J6-3|ZNF615;REV__nc|ENSG00000197619|Q8N8J6|ZNF615;REV__ZNF615|p.T281Lfs*103|1|0.3|ENSG00000197619|chr19:51994235-51994235|T/-|frameshift_variant	35.200714571348534	1.7418937515398478	2				NaN	NaN	0	NaN	10771	4345	15116
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15119	39.692	NaN	2996.9	30	0	422.58	0.034			+	-1	PSCPQLAAL	9	57	478.74814978123163	NaN	0	478.7486572265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_PSC(Carbamidomethyl (C))PQLAAL_	REV__ENSG00000135476|ENST00000257934|ESPL1;REV__ESPL1|p.Q1311Rfs*21|1|0.46|ENSG00000135476|chr12:53286668-53286669|AG/-|frameshift_variant;REV__nc|ENSG00000135476|Q14674-2|ESPL1	47.657333605630114	0.2228375344433429	2				NaN	NaN	0	NaN	10772	4345	15116
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15124	39.707	NaN	6081.7	30	0	810.81	0.214	+			45662	TYVSGTLRF	9	68	522.2798646199227	1042.5451763066453	2	522.2797241210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TYVSGTLRF_	ENSG00000134255|ENST00000357172|CEPT1	82.7504851949679	0.08565546331141553	2				NaN	NaN	0	NaN	10774	4348	15123
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15125	39.71	NaN	2123.7	30	0	263.52	0.106			+	50264	WRAPRGQAPV	10	65	569.3172178158529	1136.6198826985058	2	569.3182373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WRAPRGQAPV_	REV__ENST00000568394.1_1_16:1030490-1030955:-|nuORF	35.61828744233558	0.588957954432594	2				NaN	NaN	0	NaN	10775	4348	15123
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15126	39.712	NaN	2970	30	0	421.12	0.106				-1	YEKGCEFVL	9	70	572.7709669541606	1143.527380975121	2	572.7702026367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_YEKGC(Carbamidomethyl (C))EFVL_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	41.42661286455405	0.403525789677298	2				NaN	NaN	0	NaN	10776	4348	15123
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15127	39.714	NaN	2051.5	30	0	183.53	0.034	+			25027	LLGTSPERV	9	62	486.2801230796914	970.5456932261828	2	486.78118896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LLGTSPERV_	ENSG00000130193|ENST00000336138|THEM6	34.172542307311794	0.4838870758800184	2				NaN	NaN	0	NaN	10777	4348	15123
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15131	39.728	NaN	3966.4	30	0	593.48	0.214	+			49500	VWAAVPGKTF	10	65	538.3007231423466	NaN	0	538.3007202148438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VWAAVPGKTF_	CON__P02584;ENSG00000108518|ENST00000225655|PFN1	41.080066990542036	0.36199559365313844	2				NaN	NaN	0	NaN	10778	4351	15130
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15132	39.731	NaN	2173.2	30	0	551.36	0.106	+			29840	PLALQYPLLE	10	57	578.8327973294196	1155.651041725639	2	578.8331298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PLALQYPLLE_	ELK4|p.S359Ffs*37|2|0.3|ENSG00000158711|chr1:205619970-205619971|-/A|frameshift_variant	21.9598887501803	0.7004979571547932	2				NaN	NaN	0	NaN	10779	4351	15130
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15133	39.733	NaN	2586	30	0	191.8	0.038	+			16690	HITSNYLKQI	10	64	608.8347459909191	NaN	0	608.8340454101562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HITSNYLKQI_	DSTYK|p.L848Afs*3|1|0.28|ENSG00000133059|chr1:205148266-205148267|-/T|frameshift_variant;ENSG00000133059|ENST00000367162|DSTYK;nc|ENSG00000133059|Q6XUX3-2|DSTYK	51.19269402634007	0.2980620950593832	2				NaN	NaN	0	NaN	10780	4351	15130
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15138	39.748	NaN	11482	30	0	1471.7	0.214				-1	 	0	81	574.803265671971	1147.5919784107418	2	574.8031616210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10782	4354	15137
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15139	39.752	NaN	5042.3	30	0	596.9	0.106	+			45614	TYQDIQNTI	9	76	548.2693271542574	1094.5241013753148	2	548.26953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TYQDIQNTI_	ENSG00000181222|ENST00000674977|POLR2A;nc|ENSG00000181222|P24928|POLR2A	109.43880257439609	0.029570636687953285	2				NaN	NaN	0	NaN	10783	4354	15137
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15140	39.754	NaN	5556.5	30	0	781.71	0.106	+			36335	SESSLALRL	9	60	488.277050292041	974.539547650882	2	488.2764892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SESSLALRL_	DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;nc|ENSG00000187908|Q9UGM3-2|DMBT1;nc|ENSG00000187908|Q9UGM3-2|DMBT1;nc|ENSG00000187908|Q9UGM3-2|DMBT1;nc|ENSG00000187908|Q9UGM3-2|DMBT1;nc|ENSG00000187908|Q9UGM3-2|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-4|DMBT1;nc|ENSG00000187908|Q9UGM3-4|DMBT1;nc|ENSG00000187908|Q9UGM3-4|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-8|DMBT1;nc|ENSG00000187908|Q9UGM3-8|DMBT1;nc|ENSG00000187908|Q9UGM3-8|DMBT1;nc|ENSG00000187908|Q9UGM3-8|DMBT1;nc|ENSG00000187908|Q9UGM3-9|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1	131.03138772384656	0.014687601201650916	2				NaN	NaN	0	NaN	10784	4354	15137
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15141	39.755	NaN	3983.2	30	0	352.79	0.106			+	31136	QGDRSPRSF	9	71	525.2583891105868	1048.5022252879735	2	525.2586059570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QGDRSPRSF_	REV__ENST00000329285.12_1_19:35264009-35264063:-|nuORF	56.43379154798735	0.2433427591689151	2				NaN	NaN	0	NaN	10785	4354	15137
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15142	39.757	NaN	4968.2	30	0	600.46	0.037	+			44158	TQNPNYYNL	9	75	563.7622084610083	1125.5098639888165	2	563.760986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TQNPNYYNL_	ENSG00000144028|ENST00000323853|SNRNP200;ENST00000497539.5_1_2:96940752-96950410:-|nuORF	49.536043120802724	0.308405419312776	2				NaN	NaN	0	NaN	10786	4354	15137
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15149	39.775	NaN	5572.2	30	0	1059.4	0.214			+	-1	SECDTSMYF	9	67	549.6918242911045	1097.3690956490088	2	549.6926879882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_SECDTSM(Oxidation (M))YF_	REV__ENSG00000007047|ENST00000262891|MARK4;REV__ENST00000588621.5_1_19:45767955-45791108:+|nuORF;REV__MARK3|p.N282S|1|0.26|ENSG00000075413|chr14:103466039-103466039|A/G|missense_variant;REV__nc|ENSG00000007047|Q96L34-2|MARK4	24.20275056022122	0.577060078256802	2				NaN	NaN	0	NaN	10790	4357	15148
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15150	39.779	NaN	3576.3	30	0	777.96	0.106				-1	 	0	55	339.22070356019714	676.4268541871943	2	339.22052001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10791	4357	15148
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15151	39.781	NaN	2421.9	30	0	492.13	0.106				-1	EVCAATYM	8	60	452.18252334507287	902.3504937569458	2	452.182373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_EVCAATYM(Oxidation (M))_	CTLA4|p.Y177Ifs*10|1|0.14|ENSG00000163599|chr2:203871443-203871443|T/-|frameshift_variant;ENSG00000163599|ENST00000648405|CTLA4;nc|ENSG00000163599|P16410-5|CTLA4	19.359975847455235	0.7988239741663654	2				NaN	NaN	0	NaN	10792	4357	15148
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15152	39.782	NaN	3069.7	30	0	375.55	0.106			+	9725	EMTSIFSLVE	10	67	586.2836027170548	1170.5526525009095	2	586.2832641601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_EM(Oxidation (M))TSIFSLVE_	REV__ENSG00000124279|ENST00000264669|FASTKD3;REV__FASTKD3|p.D144Gfs*3|3|0.29|ENSG00000124279|chr5:7867655-7867656|-/T|frameshift_variant;REV__FASTKD3|p.K143Gfs*3|1|0.17|ENSG00000124279|chr5:7867656-7867657|TT/-|frameshift_variant;REV__FASTKD3|p.K143Rfs*36|1|0.3|ENSG00000124279|chr5:7867656-7867656|T/-|frameshift_variant;REV__FASTKD3|p.L285Yfs*3|1|0.19|ENSG00000124279|chr5:7867231-7867231|G/-|frameshift_variant;REV__FASTKD3|p.P387Tfs*44|1|0.45|ENSG00000124279|chr5:7866925-7866926|-/T|frameshift_variant	49.44154591367651	0.46214596422418036	2				NaN	NaN	0	NaN	10793	4357	15148
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15153	39.784	NaN	2566.1	30	0	345.59	0.035	+			19390	KAMPWALSL	9	63	508.78473391228823	NaN	0	508.7847900390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KAMPWALSL_	CST9|p.L17_L18insE|1|0.07|ENSG00000173335|chr20:23605813-23605814|-/TTC|inframe_insertion;CST9|p.L17H|1|0.05|ENSG00000173335|chr20:23605815-23605815|A/T|missense_variant;ENSG00000173335|ENST00000376971|CST9	68.78682469695295	0.1118430353446351	2				NaN	NaN	0	NaN	10794	4357	15148
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15159	39.8	NaN	6924.7	30	0	611.28	0.214	+			39800	STLDIVLANK	10	66	537.313951221194	1072.6133495091879	2	537.3138427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STLDIVLANK_	ENSG00000167325|ENST00000300738|RRM1	128.3478880297481	0.01553957493207534	2				NaN	NaN	0	NaN	10797	4360	15158
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15160	39.804	NaN	5320.4	30	0	1474.4	0.106	+			48750	VTVPPGPSL	9	51	433.7527274884929	865.4909020437858	2	433.7522888183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTVPPGPSL_	ENSG00000159352|ENST00000368884|PSMD4;ENST00000480546.1_1_10:95718567-95721153:-|nuORF;nc|ENSG00000159352|P55036-2|PSMD4;nc|ENSG00000180764|A2A3N6|PIPSL	104.74654710444128	0.034358562718640136	2				NaN	NaN	0	NaN	10798	4360	15158
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15161	39.806	NaN	2315.5	30	0	332.93	0.106			+	5556	AVALVLTVTG	10	67	472.2948782471954	942.5752035611908	2	472.2943420410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVALVLTVTG_	REV__ENST00000593133.5_1_19:38085417-38085510:-|nuORF	45.9519527083369	0.4943008177357963	2				NaN	NaN	0	NaN	10799	4360	15158
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15162	39.808	NaN	1693.1	30	0	242.36	0.106			+	50002	WAPTGSGW	8	47	431.19806349321897	NaN	0	431.1976318359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_WAPTGSGW_	REV__ENST00000392833.6_1_3:157188176-157188224:-|nuORF	44.53106598305862	1.7418937515398478	2				NaN	NaN	0	NaN	10800	4360	15158
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15163	39.809	NaN	3128.7	30	0	275.56	0.037	+			12035	FYITSRTQF	9	70	581.798866048379	1161.5831791635578	2	581.7980346679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FYITSRTQF_	ENSG00000197122|ENST00000373578|SRC;nc|ENSG00000197122|P12931-2|SRC;nc|ENSG00000197122|P12931-3|SRC	39.252832667884924	0.4290233611298554	2				NaN	NaN	0	NaN	10801	4360	15158
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15169	39.826	NaN	5613.1	30	0	1217.9	0.214				-1	 	0	61	336.5341033168387	1006.5804805507162	3	336.53424072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10804	4363	15168
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15170	39.829	NaN	3225.3	30	0	228.25	0.106	+			24322	LFIATSQKF	9	66	527.8005698130714	1053.5865866929428	2	527.7999877929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LFIATSQKF_	ENSG00000025770|ENST00000420993|NCAPH2;nc|ENSG00000025770|Q6IBW4-2|NCAPH2;nc|ENSG00000025770|Q6IBW4-4|NCAPH2	74.1650062923329	0.12277912660386392	2				NaN	NaN	0	NaN	10805	4363	15168
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15171	39.831	NaN	4496.6	30	0	313.85	0.106	+			28215	NAVKDFTSF	9	73	514.7561151010217	1027.4976772688433	2	514.75634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NAVKDFTSF_	ENSG00000168769|ENST00000380013|TET2;nc|ENSG00000168769|Q6N021-2|TET2;nc|ENSG00000168769|Q6N021-3|TET2;TET2|p.M695Tfs*4|1|0.41|ENSG00000168769|chr4:105236026-105236029|TGTC/-|frameshift_variant;TET2|p.N202Tfs*5|1|0.32|ENSG00000168769|chr4:105234543-105234543|A/-|frameshift_variant;TET2|p.V1949Sfs*7|1|0.31|ENSG00000168769|chr4:105276348-105276349|-/A|frameshift_variant	75.04331003522576	0.118981335847003	2				NaN	NaN	0	NaN	10806	4363	15168
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15172	39.833	NaN	3404.5	30	0	310.78	0.106	+			27537	MPAKKPKR	8	59	478.2977113377828	954.5808697423656	2	478.2970275878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MPAKKPKR_	ENSG00000007202|ENST00000528896|BLTP2;nc|ENSG00000007202|Q14667-2|BLTP2	35.200714571348534	0.6875396545722289	2				NaN	NaN	0	NaN	10807	4363	15168
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15173	39.835	NaN	2647.4	30	0	347.56	0.106			+	51237	YPYYNNIL	8	63	530.2611654389756	1058.507777944751	2	530.2619018554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YPYYNNIL_	REV__ENSG00000182218|ENST00000330710|HHIPL1;REV__nc|ENSG00000182218|Q96JK4-2|HHIPL1	28.2542754592877	0.7411748056684583	2				NaN	NaN	0	NaN	10808	4363	15168
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15174	39.837	NaN	4339.4	30	0	452.32	0.106	+			36614	SGFEGMFTK	9	67	502.2311464981097	1002.4477400630194	2	502.23089599609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SGFEGMFTK_	ENSG00000153201|ENST00000283195|RANBP2;ENSG00000153201|ENST00000283195|RANBP2;ENSG00000153201|ENST00000283195|RANBP2;RANBP2|p.C2737Vfs*35|1|0.18|ENSG00000153201|chr2:108772957-108772957|T/-|frameshift_variant;RANBP2|p.C2737Vfs*35|1|0.18|ENSG00000153201|chr2:108772957-108772957|T/-|frameshift_variant;RANBP2|p.C2737Vfs*35|1|0.18|ENSG00000153201|chr2:108772957-108772957|T/-|frameshift_variant;RANBP2|p.F3068Lfs*10|1|0.06|ENSG00000153201|chr2:108782692-108782692|T/-|frameshift_variant;RANBP2|p.F3068Lfs*10|1|0.06|ENSG00000153201|chr2:108782692-108782692|T/-|frameshift_variant;RANBP2|p.F3068Lfs*10|1|0.06|ENSG00000153201|chr2:108782692-108782692|T/-|frameshift_variant;RANBP2|p.H3114Sfs*18|1|0.33|ENSG00000153201|chr2:108782827-108782828|-/T|frameshift_variant;RANBP2|p.H3114Sfs*18|1|0.33|ENSG00000153201|chr2:108782827-108782828|-/T|frameshift_variant;RANBP2|p.H3114Sfs*18|1|0.33|ENSG00000153201|chr2:108782827-108782828|-/T|frameshift_variant;RANBP2|p.K1989Nfs*9|1|0.05|ENSG00000153201|chr2:108766505-108766506|-/TATCCTG|frameshift_variant;RANBP2|p.K1989Nfs*9|1|0.05|ENSG00000153201|chr2:108766505-108766506|-/TATCCTG|frameshift_variant;RANBP2|p.K1989Nfs*9|1|0.05|ENSG00000153201|chr2:108766505-108766506|-/TATCCTG|frameshift_variant;RANBP2|p.K2576Nfs*63|2|0.22|ENSG00000153201|chr2:108768262-108768262|A/-|frameshift_variant;RANBP2|p.K2576Nfs*63|2|0.22|ENSG00000153201|chr2:108768262-108768262|A/-|frameshift_variant;RANBP2|p.K2576Nfs*63|2|0.22|ENSG00000153201|chr2:108768262-108768262|A/-|frameshift_variant	106.68306549817024	0.032382560583716295	2				NaN	NaN	0	NaN	10809	4363	15168
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15175	39.838	NaN	1430.2	30	0	76.59	0.031				-1	 	0	53	347.1988260647297	692.3830991962594	2	347.1986389160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10810	4363	15168
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15181	39.854	NaN	3547.5	30	0	461.97	0.214			+	37240	SKSRPPYI	8	70	474.2681884599611	946.5218239867222	2	474.2666931152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SKSRPPYI_	REV__ENST00000429967.2_1_X:128780792-128781152:-|nuORF	50.0245360154114	0.5941082100236891	2				NaN	NaN	0	NaN	10813	4366	15180
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15182	39.858	NaN	4792.7	30	0	346.38	0.106	+			27679	MPVALLRR	8	66	478.2977113377828	954.5808697423656	2	478.2973327636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MPVALLRR_	ENSG00000176248|ENST00000323927|ANAPC2;nc|ENSG00000176248|Q9UJX6-2|ANAPC2	46.76643321282427	0.6143254112625767	2				NaN	NaN	0	NaN	10814	4366	15180
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15183	39.86	NaN	2942	30	0	1064.9	0.106			+	18635	ISTLQNTN	8	47	445.7319707174599	889.4493885017198	2	445.7315368652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ISTLQNTN_	REV__COPS3|p.L315*|1|0.22|ENSG00000141030|chr17:17254938-17254938|A/-|frameshift_variant;REV__ENSG00000141030|ENST00000268717|COPS3;REV__nc|ENSG00000141030|Q9UNS2-2|COPS3	37.81151784470057	0.6698925118251505	2				NaN	NaN	0	NaN	10815	4366	15180
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15184	39.862	NaN	2144.1	30	0	301	0.106	+			29287	NYIRITSEI	9	65	554.8036029755064	1107.5926530178126	2	554.8041381835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NYIRITSEI_	ENSG00000089876|ENST00000284690|DHX32;nc|ENSG00000089876|Q7L7V1-2|DHX32	65.46538089061403	0.16805504838372562	2				NaN	NaN	0	NaN	10816	4366	15180
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15185	39.863	NaN	2241.4	30	0	283.37	0.106			+	29599	PFRSPAPY	8	59	467.7427842087982	933.4710154843964	2	467.7422180175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PFRSPAPY_	REV__BSN|p.P3390Hfs*97|1|0.22|ENSG00000164061|chr3:49662009-49662009|C/-|frameshift_variant;REV__BSN|p.P3790Hfs*5|1|0.5|ENSG00000164061|chr3:49663523-49663523|C/-|frameshift_variant;REV__ENSG00000164061|ENST00000296452|BSN	40.5726180659479	0.6527593143185008	2				NaN	NaN	0	NaN	10817	4366	15180
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15186	39.865	NaN	2937.3	30	0	395.16	0.106				-1	GRNCQTMSFF	10	77	624.2698276430833	1246.5251023529665	2	624.7715454101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_GRNC(Carbamidomethyl (C))QTMSFF_	ENST00000488170.5_1_3:160821302-160822604:-|nuORF	31.529811441608018	0.6223461015008678	2				NaN	NaN	0	NaN	10818	4366	15180
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15187	39.867	NaN	3346.6	30	0	450.16	0.036	+			7319	DASRPELLY	9	72	532.2767478698112	1062.5389428064223	2	532.2755737304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DASRPELLY_	ENSG00000131446|ENST00000307826|MGAT1;MGAT1|p.R260H|1|0.15|ENSG00000131446|chr5:180792193-180792193|C/T|missense_variant	42.396135135203025	0.392153681582562	2				NaN	NaN	0	NaN	10819	4366	15180
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15194	39.885	NaN	5935.9	30	0	604.78	0.214	+			6619	AYQSVQETW	9	72	556.2565832109083	1110.4986134886165	2	556.2568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AYQSVQETW_	ENSG00000204385|ENST00000229729|SLC44A4;nc|ENSG00000204385|Q53GD3-3|SLC44A4;nc|ENSG00000204385|Q53GD3-4|SLC44A4;SLC44A4|p.F618Sfs*25|1|0.43|ENSG00000204385|chr6:31864889-31864889|A/-|frameshift_variant;SLC44A4|p.G398Afs*7|1|0.29|ENSG00000204385|chr6:31869197-31869197|G/-|frameshift_variant;SLC44A4|p.S619Lfs*9|1|0.31|ENSG00000204385|chr6:31864888-31864889|-/A|frameshift_variant	134.7655990226056	0.012935733000282069	2				NaN	NaN	0	NaN	10823	4369	15193
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15195	39.889	NaN	2274.1	30	0	283.93	0.106	+			41335	SVLSPLLNK	9	60	485.8001158261125	969.585678719025	2	485.800048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVLSPLLNK_	ENSG00000151491|ENST00000281172|EPS8;nc|ENSG00000151491|Q12929-2|EPS8	51.19269402634007	0.2889735674168909	2				NaN	NaN	0	NaN	10824	4369	15193
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15196	39.891	NaN	2720.6	30	0	185.94	0.106	+			17669	IEKLAVEAL	9	61	493.3004925430231	984.5864321528462	2	493.2998962402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IEKLAVEAL_	ENSG00000166165|ENST00000348956|CKB	60.1669710687717	0.2122228167747824	2				NaN	NaN	0	NaN	10825	4369	15193
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15197	39.892	NaN	4584.1	30	0	689.34	0.106	+			32587	QYEQVKQLF	9	66	591.8111815440675	1181.607810154935	2	592.3128662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QYEQVKQLF_	CNOT1|p.Q904Sfs*9|4|0.29|ENSG00000125107|chr16:58555436-58555436|A/-|frameshift_variant;ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1;nc|ENSG00000125107|A5YKK6-4|CNOT1	99.01295224348159	0.040209060045561164	2				NaN	NaN	0	NaN	10826	4369	15193
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15198	39.894	NaN	2980.1	30	0	528.13	0.106				-1	AYCGFLHPGV	10	57	374.1794681904276	1119.5165751714828	3	374.1794128417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_AYC(Carbamidomethyl (C))GFLHPGV_	PARG|p.R854H|1|0.49|ENSG00000227345|chr10:49832889-49832889|C/T|missense_variant	24.519189625965996	0.6795976720565101	2				NaN	NaN	0	NaN	10827	4369	15193
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15199	39.896	NaN	2935.1	30	0	316.29	0.106	+			41853	SVSVSLPSVF	10	75	511.28193343223035	1020.5493139312607	2	511.28173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVSVSLPSVF_	ENST00000491729.1_1_21:47608607-47611005:-|nuORF	35.61828744233558	0.588957954432594	2				NaN	NaN	0	NaN	10828	4369	15193
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15200	39.898	NaN	1319	30	0	78.669	0.032				-1	CGSSCCSCCW	10	53	384.7720581730883	NaN	0	384.7721252441406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C)	_CGSSCCSC(Carbamidomethyl (C))C(Carbamidomethyl (C))W_	ENST00000228741.7_1_12:96588285-96617411:+|nuORF	7.3997283801893845	0.4201028297492154	2				NaN	NaN	0	NaN	10829	4369	15193
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15211	39.924	NaN	4272.7	30	0	496.36	0.145	+			9805	EPDISYRTF	9	70	564.2714754625978	1126.5283979919955	2	564.27197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EPDISYRTF_	CACNA1D|p.N2051Tfs*16|1|0.26|ENSG00000157388|chr3:53810254-53810254|A/-|frameshift_variant;ENSG00000157388|ENST00000350061|CACNA1D;nc|ENSG00000157388|Q01668-2|CACNA1D;nc|ENSG00000157388|Q01668-3|CACNA1D	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	10837	4372	15210
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15218	39.943	NaN	2523	30	0	128.56	0.214				-1	 	0	64	325.18550475160305	648.3564565700061	2	325.1855773925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10841	4375	15217
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15219	39.947	NaN	6454.9	30	0	1183.9	0.106	+			30981	QERAYIVQL	9	74	560.310786704052	1118.607020474904	2	560.311279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QERAYIVQL_	ENSG00000168066|ENST00000377390|SF1;ENST00000482693.1_1_11:64540804-64545891:-|nuORF;nc|ENSG00000168066|Q15637-2|SF1;nc|ENSG00000168066|Q15637-3|SF1;nc|ENSG00000168066|Q15637-4|SF1;nc|ENSG00000168066|Q15637-5|SF1;nc|ENSG00000168066|Q15637-6|SF1;nc|ENSG00000168066|Q15637-7|SF1;SF1|p.P74Lfs*63|1|0.43|ENSG00000168066|chr11:64773445-64773445|G/-|frameshift_variant;SF1|p.R46Q|1|0.32|ENSG00000168066|chr11:64776521-64776521|C/T|missense_variant;SF1|p.S182Lfs*2|1|0.29|ENSG00000168066|chr11:64769552-64769552|C/-|frameshift_variant;SF1|p.V573Sfs*23|1|0.22|ENSG00000168066|chr11:64766025-64766025|G/-|frameshift_variant	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	10842	4375	15217
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15220	39.949	NaN	2600.5	30	0	199.1	0.106			+	-1	ACASCKKALL	10	69	532.7824169423669	NaN	0	532.7821044921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_AC(Carbamidomethyl (C))ASCKKALL_	REV__ENST00000330236.6_1_6:28116276-28116375:+|nuORF	30.503639358989545	0.4000169810673414	2				NaN	NaN	0	NaN	10843	4375	15217
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15221	39.951	NaN	2034.3	30	0	194.22	0.106	+			19758	KDYNVLVM	8	59	491.25792722257404	980.5013015119481	2	491.2563171386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KDYNVLVM_	ENSG00000113712|ENST00000377843|CSNK1A1;nc|ENSG00000113712|P48729-2|CSNK1A1;nc|ENSG00000113712|P48729-3|CSNK1A1	44.116797842482775	0.6307669463330267	2				NaN	NaN	0	NaN	10844	4375	15217
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15222	39.953	NaN	3661.4	30	0	244.27	0.035	+			14653	GTIAGLNVLR	10	63	507.30791334803814	1012.6012737628763	2	507.3074951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTIAGLNVLR_	ENSG00000109971|ENST00000534624|HSPA8;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;ENST00000508840.1_1_8:30095113-30095479:+|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;ENST00000532167.5_1_11:122930757-122931830:-|nuORF;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;HSPA8|p.K569Dfs*6|1|0.3|ENSG00000109971|chr11:123058302-123058303|TC/-|frameshift_variant;nc|ENSG00000109971|P11142-2|HSPA8	49.46582953369473	0.46192220282894864	2				NaN	NaN	0	NaN	10845	4375	15217
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15229	39.969	NaN	4831.9	30	0	336.71	0.214	+			6504	AYAIIKEEL	9	70	525.2977155087956	1048.580878084391	2	525.2976684570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AYAIIKEEL_	ENSG00000156802|ENST00000287394|ATAD2;ENST00000517666.5_1_8:124333376-124408650:-|nuORF	95.81516180277367	0.04847050768394289	2				NaN	NaN	0	NaN	10849	4378	15228
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15230	39.973	NaN	3390.7	30	0	351.14	0.106	+			20429	KETTYYDVL	9	73	566.2823788157173	1130.5502046982344	2	566.2825317382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KETTYYDVL_	DNAJA1|p.F92Lfs*22|1|0.37|ENSG00000086061|chr9:33026951-33026951|T/-|frameshift_variant;ENSG00000086061|ENST00000330899|DNAJA1;nc|ENSG00000086061|P31689-2|DNAJA1	42.86426827375447	0.38666266728046506	2				NaN	NaN	0	NaN	10850	4378	15228
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15231	39.975	NaN	2373.7	30	0	221	0.036	+			28449	NFEVITVVF	9	58	534.2916949392202	NaN	0	534.2906494140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NFEVITVVF_	tr|U7STD0|U7STD0_FUSNUMultifunctionalfusionproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=msrBPE=3SV=1	35.15202426646627	0.3000918603816441	2				NaN	NaN	0	NaN	10851	4378	15228
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15237	39.991	NaN	12162	30	0	3073.3	0.214	+			11164	FGPGPGSNF	9	55	440.203434700919	878.392316468638	2	440.2032775878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FGPGPGSNF_	ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;ENST00000495810.1_1_7:26235422-26236427:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1	104.74654710444128	0.034358562718640136	2				NaN	NaN	0	NaN	10854	4381	15236
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15238	39.994	NaN	14538	30	0	2378.5	0.106	+			50029	WDQLQSPFQ	9	73	574.7727475384847	1147.5309421437694	2	574.7726440429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WDQLQSPFQ_	GREB1|p.K311Nfs*65|1|0.16|ENSG00000196208|chr2:11585181-11585181|C/-|frameshift_variant	61.691277971877994	0.19951612995419254	2				NaN	NaN	0	NaN	10855	4381	15236
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15239	39.996	NaN	4668.9	30	0	544.8	0.106			+	27299	MGSAALPPTSM	11	70	539.7467368291683	1077.4789207251365	2	539.7464599609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_MGSAALPPTSM(Oxidation (M))_	REV__ENSG00000164758|ENST00000297347|MED30;REV__ENST00000519879.1_1_8:118533115-118541135:+|nuORF;REV__nc|ENSG00000164758|Q96HR3-2|MED30	54.776311868738084	0.3700837260462177	2				NaN	NaN	0	NaN	10856	4381	15236
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15240	39.998	NaN	3102.5	30	0	300.79	0.106	+			7035	CSPLYLPVL	9	63	531.2878879779613	NaN	0	531.2874145507812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_C(Carbamidomethyl (C))SPLYLPVL_	ENST00000554169.1_1_14:95999360-96000279:-|nuORF	52.29916861842294	0.1908481487866478	2				NaN	NaN	0	NaN	10857	4381	15236
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15241	40	NaN	2537.9	30	0	291.95	0.106	+			1550	AGFDATNILNK	11	62	582.3064499073673	1162.5983468815346	2	582.3058471679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AGFDATNILNK_	ENSG00000135624|ENST00000258091|CCT7;nc|ENSG00000135624|Q99832-2|CCT7;nc|ENSG00000135624|Q99832-3|CCT7;nc|ENSG00000135624|Q99832-4|CCT7	74.1650062923329	0.2010173757047072	2				NaN	NaN	0	NaN	10858	4381	15236
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15242	40.002	NaN	1442.8	30	0	255.04	0.034	+			10874	FAVRVGIPS	9	53	473.27956822539807	944.5445835175962	2	473.27972412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FAVRVGIPS_	tr|U7T676|U7T676_FUSNUGlutaminaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=glsAPE=3SV=1	21.9598887501803	0.5980208138527809	2				NaN	NaN	0	NaN	10859	4381	15236
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15247	40.016	NaN	3688.8	30	0	434.64	0.214	+			44728	TTLPTDFNY	9	66	536.2518960003323	1070.4892390674645	2	536.2525024414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTLPTDFNY_	ENSG00000121152|ENST00000240423|NCAPH;nc|ENSG00000121152|Q15003-2|NCAPH	26.69291269510374	0.5537881896960711	2				NaN	NaN	0	NaN	10861	4384	15246
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15248	40.02	NaN	5464.8	30	0	593.47	0.106			+	20747	KGVPASSSLPL	11	73	528.3087169734513	1054.6028810137025	2	528.3080444335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KGVPASSSLPL_	REV__ENSG00000131864|ENST00000254181|USP29	27.047317107675042	0.7060868989289394	2				NaN	NaN	0	NaN	10862	4384	15246
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15249	40.022	NaN	3125.4	30	0	257.03	0.106	+			21047	KKKRSSASV	9	61	495.808314377568	989.6020758219361	2	495.8075866699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KKKRSSASV_	ENSG00000163935|ENST00000394752|SFMBT1;nc|ENSG00000163935|Q9UHJ3-2|SFMBT1;SFMBT1|p.K735Sfs*45|1|0.37|ENSG00000163935|chr3:52907196-52907196|T/-|frameshift_variant	32.81241826257853	0.4965981579233955	2				NaN	NaN	0	NaN	10863	4384	15246
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15250	40.023	NaN	2765.2	30	0	774.87	0.106				-1	CQTRVCPQI	9	61	368.8479682287666	1103.5220752864998	3	368.848388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_CQTRVC(Carbamidomethyl (C))PQI_	ENSG00000139116|ENST00000361418|KIF21A;KIF21A|p.L1270Sfs*13|1|0.12|ENSG00000139116|chr12:39318174-39318175|-/G|frameshift_variant;KIF21A|p.N748Ifs*9|1|0.3|ENSG00000139116|chr12:39340232-39340232|T/-|frameshift_variant;KIF21A|p.P1541Lfs*6|1|0.27|ENSG00000139116|chr12:39303074-39303074|G/-|frameshift_variant;KIF21A|p.S524Lfs*15|1|0.26|ENSG00000139116|chr12:39351880-39351880|A/-|frameshift_variant;KIF21A|p.V717Lfs*12|4|0.32|ENSG00000139116|chr12:39340327-39340327|T/-|frameshift_variant;nc|ENSG00000139116|Q7Z4S6-2|KIF21A;nc|ENSG00000139116|Q7Z4S6-3|KIF21A;nc|ENSG00000139116|Q7Z4S6-4|KIF21A;nc|ENSG00000139116|Q7Z4S6-5|KIF21A;nc|ENSG00000139116|Q7Z4S6-6|KIF21A	22.579656572578934	0.5922287541734749	2				NaN	NaN	0	NaN	10864	4384	15246
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15251	40.025	NaN	2835.6	30	0	266.58	0.106	+			8514	EATLIPVLSF	10	64	545.3148554376705	NaN	0	545.7772216796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EATLIPVLSF_	ENSG00000188690|ENST00000368797|UROS;UROS|p.F196Lfs*44|2|0.43|ENSG00000188690|chr10:125794952-125794952|A/-|frameshift_variant	27.882242232435846	0.4086243523356342	2				NaN	NaN	0	NaN	10865	4384	15246
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15252	40.027	NaN	2743.5	30	0	455.49	0.106	+			34829	RYMDAWNTV	9	69	578.2674648859	1154.5203768386	2	578.2676391601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RYMDAWNTV_	ENSG00000099800|ENST00000215570|TIMM13	29.170058357718403	0.5306379469863586	2				NaN	NaN	0	NaN	10866	4384	15246
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15253	40.029	NaN	3201.8	30	0	301.02	0.035	+			37790	SLYLVISNK	9	63	518.806094042346	1035.5976351514919	2	518.8054809570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SLYLVISNK_	ENST00000525815.5_2_11:107729816-107729852:-|nuORF	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	10867	4384	15246
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15264	40.052	NaN	5655.7	30	0	696.69	0.214	+			12542	GEGEGRVGIIL	11	76	550.3078937421342	1098.6012345510683	2	550.3095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEGEGRVGIIL_	CFTR|p.G1208Afs*3|1|0.3|ENSG00000001626|chr7:117627672-117627672|G/-|frameshift_variant;CFTR|p.L1258Ffs*7|1|0.26|ENSG00000001626|chr7:117642487-117642488|-/T|frameshift_variant;CFTR|p.S1297Lfs*31|1|0.28|ENSG00000001626|chr7:117652852-117652852|T/-|frameshift_variant;ENSG00000001626|ENST00000003084|CFTR;nc|ENSG00000001626|P13569-2|CFTR	72.2432373244024	0.21703855426835802	2				NaN	NaN	0	NaN	10875	4387	15263
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15265	40.056	NaN	4170.1	30	0	509.69	0.106				-1	LMSLVEQVP	9	61	516.2763771799821	1030.538201426764	2	516.276611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LM(Oxidation (M))SLVEQVP_	ENST00000361937.7_1_15:41271364-41271448:-|nuORF	60.97194046774394	0.20551255781574032	2				NaN	NaN	0	NaN	10876	4387	15263
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15266	40.058	NaN	2016.7	30	0	233.4	0.106	+			15788	GVVAVLLTK	9	52	450.3005152355314	898.5864775378628	2	450.2999572753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GVVAVLLTK_	ENSG00000169710|ENST00000306749|FASN;FASN|p.A413Hfs*39|2|0.47|ENSG00000169710|chr17:82091478-82091478|G/-|frameshift_variant	79.71258880314673	0.09879134589249085	2				NaN	NaN	0	NaN	10877	4387	15263
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15267	40.06	NaN	3827.1	30	0	165.46	0.106				-1	IVTVFFYCAVF	11	85	683.3498678726384	1364.6851828120766	2	683.3492431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_IVTVFFYC(Carbamidomethyl (C))AVF_	ENST00000402506.5_1_7:2567604-2567793:+|nuORF	35.61828744233558	0.616184410043185	2				NaN	NaN	0	NaN	10878	4387	15263
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15268	40.062	NaN	2315.7	30	0	212.19	0.034				-1	KKMLVEAT	8	58	468.2637367520188	934.5129205708377	2	468.26336669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_KKM(Oxidation (M))LVEAT_	ENSG00000166848|ENST00000300086|TERF2IP;TERF2IP|p.N339Ifs*12|1|0.1|ENSG00000166848|chr16:75656422-75656422|A/-|frameshift_variant	35.61828744233558	0.6843154725607303	2				NaN	NaN	0	NaN	10879	4387	15263
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15275	40.08	NaN	5808.5	30	0	1070.2	0.214			+	-1	MLTRAYFV	8	71	508.76620400164234	1015.5178550700847	2	508.76678466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))LTRAYFV_	REV__ENST00000256897.8_1_5:86708597-86708696:-|nuORF	65.80317337860623	0.44433089765398776	2				NaN	NaN	0	NaN	10883	4390	15274
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15276	40.083	NaN	3053.3	30	0	401.3	0.106	+			35242	SALGYLHSL	9	55	480.76093686001235	959.5073207868247	2	480.760986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SALGYLHSL_	ENSG00000118515|ENST00000367858|SGK1;ENST00000367855.7_1_6:134492115-134495951:-|nuORF;ENST00000474427.6_1_6:134493798-134493948:-|nuORF;ENST00000477460.6_1_6:134491408-134493948:-|nuORF;ENST00000524764.1_1_6:134493798-134494280:-|nuORF;nc|ENSG00000118515|O00141-3|SGK1;nc|ENSG00000118515|O00141-4|SGK1;nc|ENSG00000118515|O00141-5|SGK1;nc|ENSG00000118515|O00141|SGK1	66.42927471994793	0.16001998865088202	2				NaN	NaN	0	NaN	10884	4390	15274
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15277	40.085	NaN	2387.9	30	0	271.43	0.106	+			36402	SETLLRVM	8	59	474.76235882321635	NaN	0	474.7626647949219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SETLLRVM_	ENSG00000052749|ENST00000370992|RRP12;ENST00000479317.1_1_10:99147891-99148113:-|nuORF;nc|ENSG00000052749|Q5JTH9-2|RRP12;nc|ENSG00000052749|Q5JTH9-3|RRP12	84.9155231211612	1.7418937515398478	2				NaN	NaN	0	NaN	10885	4390	15274
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15278	40.087	NaN	2680.5	30	0	242.27	0.106			+	-1	RCCLHIAVGL	10	61	571.2996165827177	1140.5846802322353	2	571.2987670898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_RCC(Carbamidomethyl (C))LHIAVGL_	REV__ENSG00000172116|ENST00000390655|CD8B;REV__nc|ENSG00000172116|P10966-2|CD8B;REV__nc|ENSG00000172116|P10966-4|CD8B;REV__nc|ENSG00000172116|P10966-6|CD8B	47.91560031466742	0.4762067885998563	2				NaN	NaN	0	NaN	10886	4390	15274
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15279	40.089	NaN	1982.8	30	0	224.66	0.106			+	23426	LACLALFTH	9	65	494.76597834759366	NaN	0	494.7655029296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LACLALFTH_	REV__ENSG00000275052|ENST00000616407|PPP4R3B;REV__ENST00000482826.1_1_2:55795287-55800821:-|nuORF;REV__nc|ENSG00000275052|Q5MIZ7-2|PPP4R3B;REV__nc|ENSG00000275052|Q5MIZ7-5|PPP4R3B	42.47446043378293	0.25855550551448697	2				NaN	NaN	0	NaN	10887	4390	15274
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15280	40.09	NaN	2623.3	30	0	410.94	0.036	+			25300	LPAHDSRLR	9	62	532.802922307435	NaN	0	532.802734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LPAHDSRLR_	ENSG00000172086|ENST00000347055|KRCC1	45.9519527083369	0.2345902329052062	2				NaN	NaN	0	NaN	10888	4390	15274
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15287	40.108	NaN	6695.9	30	0	2045.7	0.214			+	29124	NTVQLPPLS	9	59	484.77425187677056	967.5339508203411	2	484.77398681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NTVQLPPLS_	REV__ENST00000595984.5_1_19:19010490-19010792:-|nuORF	44.377184641726394	0.36891676396732553	2				NaN	NaN	0	NaN	10892	4393	15286
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15288	40.112	NaN	7062.1	30	0	1300.6	0.106	+			38747	SSLPTQLFK	9	73	510.7896830292635	1019.564813125327	2	510.7899169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSLPTQLFK_	ENSG00000017427|ENST00000337514|IGF1;nc|ENSG00000017427|P05019-4|IGF1;nc|ENSG00000017427|P05019|IGF1	86.88156770896713	0.07365720931774442	2				NaN	NaN	0	NaN	10893	4393	15286
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15289	40.114	NaN	3509.9	30	0	466.79	0.106	+			36615	SGFEGMFTK	9	67	502.2311464981097	1002.4477400630194	2	502.2314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SGFEGMFTK_	ENSG00000153201|ENST00000283195|RANBP2;ENSG00000153201|ENST00000283195|RANBP2;ENSG00000153201|ENST00000283195|RANBP2;RANBP2|p.C2737Vfs*35|1|0.18|ENSG00000153201|chr2:108772957-108772957|T/-|frameshift_variant;RANBP2|p.C2737Vfs*35|1|0.18|ENSG00000153201|chr2:108772957-108772957|T/-|frameshift_variant;RANBP2|p.C2737Vfs*35|1|0.18|ENSG00000153201|chr2:108772957-108772957|T/-|frameshift_variant;RANBP2|p.F3068Lfs*10|1|0.06|ENSG00000153201|chr2:108782692-108782692|T/-|frameshift_variant;RANBP2|p.F3068Lfs*10|1|0.06|ENSG00000153201|chr2:108782692-108782692|T/-|frameshift_variant;RANBP2|p.F3068Lfs*10|1|0.06|ENSG00000153201|chr2:108782692-108782692|T/-|frameshift_variant;RANBP2|p.H3114Sfs*18|1|0.33|ENSG00000153201|chr2:108782827-108782828|-/T|frameshift_variant;RANBP2|p.H3114Sfs*18|1|0.33|ENSG00000153201|chr2:108782827-108782828|-/T|frameshift_variant;RANBP2|p.H3114Sfs*18|1|0.33|ENSG00000153201|chr2:108782827-108782828|-/T|frameshift_variant;RANBP2|p.K1989Nfs*9|1|0.05|ENSG00000153201|chr2:108766505-108766506|-/TATCCTG|frameshift_variant;RANBP2|p.K1989Nfs*9|1|0.05|ENSG00000153201|chr2:108766505-108766506|-/TATCCTG|frameshift_variant;RANBP2|p.K1989Nfs*9|1|0.05|ENSG00000153201|chr2:108766505-108766506|-/TATCCTG|frameshift_variant;RANBP2|p.K2576Nfs*63|2|0.22|ENSG00000153201|chr2:108768262-108768262|A/-|frameshift_variant;RANBP2|p.K2576Nfs*63|2|0.22|ENSG00000153201|chr2:108768262-108768262|A/-|frameshift_variant;RANBP2|p.K2576Nfs*63|2|0.22|ENSG00000153201|chr2:108768262-108768262|A/-|frameshift_variant	65.46538089061403	0.16805504838372562	2				NaN	NaN	0	NaN	10894	4393	15286
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15290	40.116	NaN	3327	30	0	348.18	0.106			+	-1	MPSIRWVGL	9	68	537.7935238696645	1073.5724948061288	2	537.792724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_M(Oxidation (M))PSIRWVGL_	REV__ENSG00000196517|ENST00000372310|SLC6A9;REV__nc|ENSG00000196517|P48067-3|SLC6A9;REV__nc|ENSG00000196517|P48067|SLC6A9;REV__SLC6A9|p.N490Efs*2|1|0.07|ENSG00000196517|chr1:44001250-44001251|-/C|frameshift_variant	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	10895	4393	15286
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15291	40.118	NaN	2632.7	30	0	279.96	0.106	+			27337	MIHLRVSLLWP	11	71	682.8975849582341	1363.7806169832681	2	682.8976440429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MIHLRVSLLWP_	ENST00000542452.1_1_11:73727738-73744892:-|nuORF	26.69291269510374	0.70980431218767	2				NaN	NaN	0	NaN	10896	4393	15286
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15292	40.119	NaN	1152.3	30	0	48.968	0.106				-1	WMRRMRILCWL	11	68	826.9152699513918	NaN	0	826.9147338867188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),2 Oxidation (M)	_WM(Oxidation (M))RRM(Oxidation (M))RILC(Carbamidomethyl (C))WL_	ENST00000418154.1_1_1:64254543-64254969:-|nuORF	5.55782384252955	0.456735970842152	2				NaN	NaN	0	NaN	10897	4393	15286
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15293	40.121	NaN	2088.6	30	0	221.29	0.035	+			31790	QPLKNPSVP	9	63	490.28213074813203	978.5497085630641	2	490.28216552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QPLKNPSVP_	NMT2|p.S81L|1|0.19|ENSG00000152465|chr10:15141426-15141426|G/A|missense_variant	29.14955571784316	0.5308295550522326	2				NaN	NaN	0	NaN	10898	4393	15286
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15299	40.137	NaN	10708	30	0	1379.3	0.214	+			49932	VYVKDLSSF	9	79	529.2823382080343	1056.5501234828685	2	529.2820434570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYVKDLSSF_	ENSG00000101350|ENST00000375712|KIF3B;KIF3B-TOX2|1|fusion;KIF3B-TOX2|2|fusion	75.04331003522576	0.118981335847003	2				NaN	NaN	0	NaN	10901	4396	15298
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15300	40.141	NaN	2774.9	30	0	432.31	0.106	+			47257	VMSATFAKF	9	70	501.25905829808795	1000.5035636629759	2	501.25909423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VMSATFAKF_	ENSG00000077380|ENST00000397119|DYNC1I2;ENST00000435916.1_1_10:52025510-52026503:+|nuORF;ENST00000479806.1_1_2:172583261-172604396:+|nuORF;nc|ENSG00000077380|Q13409-2|DYNC1I2;nc|ENSG00000077380|Q13409-3|DYNC1I2;nc|ENSG00000077380|Q13409-5|DYNC1I2;nc|ENSG00000077380|Q13409-6|DYNC1I2;nc|ENSG00000077380|Q13409-7|DYNC1I2	67.49366992349736	0.1516260258713357	2				NaN	NaN	0	NaN	10902	4396	15298
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15301	40.143	NaN	3266	30	0	550.82	0.106			+	-1	HALIGQCSRYV	11	62	652.3339501471198	1302.6533473610396	2	652.334228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_HALIGQC(Carbamidomethyl (C))SRYV_	REV__ENST00000558833.1_1_15:59969298-59969517:+|nuORF	19.996771675451527	0.7768568223548057	2				NaN	NaN	0	NaN	10903	4396	15298
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15302	40.145	NaN	3489.8	30	0	440.38	0.106	+			19750	KDVLIQGL	8	56	443.27393641272295	884.5333198922459	2	443.2735290527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KDVLIQGL_	ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC;PRKDC|p.K3681Nfs*6|1|0.32|ENSG00000253729|chr8:47785174-47785177|TTCT/-|frameshift_variant;PRKDC|p.M3670*|1|0.5|ENSG00000253729|chr8:47785212-47785212|T/-|frameshift_variant;PRKDC|p.M3846Cfs*12|1|0.13|ENSG00000253729|chr8:47779047-47779047|T/-|frameshift_variant;PRKDC|p.M4020Cfs*2|1|0.31|ENSG00000253729|chr8:47776968-47776968|T/-|frameshift_variant;PRKDC|p.N3605Kfs*3|1|0.22|ENSG00000253729|chr8:47788993-47788994|-/T|frameshift_variant;PRKDC|p.N4037Ifs*15|1|0.17|ENSG00000253729|chr8:47776916-47776916|T/-|frameshift_variant;PRKDC|p.R2704Gfs*13|2|0.34|ENSG00000253729|chr8:47834238-47834238|T/-|frameshift_variant;PRKDC|p.S3402Ifs*16|1|0.04|ENSG00000253729|chr8:47799302-47799303|-/AAACCGTGAGTTAGAGGAGGTAA|frameshift_variant;PRKDC|p.S4099Qfs*6|1|0.25|ENSG00000253729|chr8:47774265-47774265|A/-|frameshift_variant;PRKDC|p.T3268Pfs*7|1|0.5|ENSG00000253729|chr8:47803426-47803426|T/-|frameshift_variant;PRKDC|p.W3401Cfs*4|1|0.01|ENSG00000253729|chr8:47799304-47799305|-/AATGAATA|frameshift_variant	79.71258880314673	0.32596852995588826	2				NaN	NaN	0	NaN	10904	4396	15298
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15303	40.146	NaN	2085.4	30	0	143.12	0.106				-1	PFMRRGPL	8	64	495.26954922322386	988.5245455132477	2	495.2698059082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_PFM(Oxidation (M))RRGPL_	ENST00000451540.1_1_13:75812162-75812900:-|nuORF	26.79610172149135	0.7524337208463756	2				NaN	NaN	0	NaN	10905	4396	15298
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15304	40.148	NaN	2928.3	30	0	239.23	0.037			+	45850	VALIVTHESPN	11	63	590.321911017906	1178.629269102612	2	590.3231201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VALIVTHESPN_	REV__ENSG00000113231|ENST00000264917|PDE8B;REV__nc|ENSG00000284762|O95263-2|PDE8B;REV__nc|ENSG00000284762|O95263-3|PDE8B;REV__nc|ENSG00000284762|O95263-4|PDE8B;REV__nc|ENSG00000284762|O95263-6|PDE8B	30.317721548370564	0.6717830234747728	2				NaN	NaN	0	NaN	10906	4396	15298
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15308	40.162	NaN	6322.5	30	0	1321.9	0.214				-1	 	0	56	336.5341033168387	1006.5804805507162	3	336.5340881347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10907	4399	15307
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15309	40.166	NaN	3403.7	30	0	342.45	0.106	+			48426	VTITDLQGL	9	64	480.2737342908379	NaN	0	480.2737731933594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTITDLQGL_	ENSG00000257743|ENST00000477922|MGAM2	58.22992032128504	0.15686832049467786	2				NaN	NaN	0	NaN	10908	4399	15307
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15310	40.168	NaN	2291.6	30	0	213.7	0.037	+			24342	LFLFGGNNFI	10	60	571.306771331042	1140.598989728884	2	571.3064575195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LFLFGGNNFI_	nc|ENSG00000212710|Q9HC47|CTAGE1	41.42661286455405	0.5359995577334734	2				NaN	NaN	0	NaN	10909	4399	15307
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15315	40.182	NaN	1339.6	30	0	69.809	0.214				-1	 	0	45	347.19866551718394	692.3827781011679	2	347.19866943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10911	4402	15314
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15316	40.186	NaN	2404.4	30	0	139.1	0.106			+	51024	YKKDFEQF	8	73	552.7712554471083	1103.5279579610165	2	552.7711181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YKKDFEQF_	REV__ENST00000552316.1_1_12:120935833-120936010:+|nuORF	49.536043120802724	0.597139409391072	2				NaN	NaN	0	NaN	10912	4402	15314
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15317	40.188	NaN	1696.8	30	0	238.53	0.036	+			31143	QGGDLGSLSPF	11	63	539.2634012624495	1076.512249591699	2	539.263427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QGGDLGSLSPF_	ENST00000574857.1_1_17:2276102-2276510:+|nuORF	29.170058357718403	0.683821074385409	2				NaN	NaN	0	NaN	10913	4402	15314
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15324	40.206	NaN	2385.5	30	0	544.79	0.214			+	35663	SDALGHHPL	9	61	473.74220868595893	NaN	0	473.7423400878906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SDALGHHPL_	REV__ENSG00000105289|ENST00000541714|TJP3;REV__nc|ENSG00000105289|O95049-3|TJP3;REV__nc|ENSG00000105289|O95049-4|TJP3;REV__nc|ENSG00000105289|O95049-5|TJP3;REV__TJP3|p.P829Afs*7|1|0.33|ENSG00000105289|chr19:3747948-3747949|-/G|frameshift_variant;REV__TJP3|p.Y830Tfs*64|1|0.18|ENSG00000105289|chr19:3747949-3747949|G/-|frameshift_variant	42.47446043378293	0.25855550551448697	2				NaN	NaN	0	NaN	10917	4405	15323
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15325	40.209	NaN	3462.7	30	0	300.75	0.106	+			19093	IYINSRSVF	9	60	549.8010399598699	NaN	0	549.8004150390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IYINSRSVF_	CAPN5|p.S449T|1|0.39|ENSG00000149260|chr11:77120767-77120767|T/A|missense_variant;ENSG00000149260|ENST00000648180|CAPN5;ENST00000527129.1_1_11:76831698-76834913:+|nuORF	67.49366992349736	0.1173583512313808	2				NaN	NaN	0	NaN	10918	4405	15323
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15326	40.211	NaN	2250.8	30	0	285.48	0.036	+			6605	AYQDRLAYL	9	70	556.790237601224	1111.565922269248	2	556.7908935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AYQDRLAYL_	ENSG00000140575|ENST00000268182|IQGAP1;ENST00000558003.1_1_15:91016937-91017036:+|nuORF;IQGAP1|p.N941Ifs*8|1|0.43|ENSG00000140575|chr15:90476693-90476693|A/-|frameshift_variant;IQGAP1|p.S1529Afs*10|1|0.15|ENSG00000140575|chr15:90492665-90492665|A/-|frameshift_variant	59.93077597824379	0.21419174904018318	2				NaN	NaN	0	NaN	10919	4405	15323
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15334	40.231	NaN	1459.5	30	0	206.88	0.143			+	-1	VMGPGWTPA	9	50	466.2221548210157	NaN	0	466.22271728515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_VM(Oxidation (M))GPGWTPA_	REV__ENSG00000105426|ENST00000262963|PTPRS;REV__ENST00000588552.5_1_19:5159112-5286160:-|nuORF;REV__nc|ENSG00000105426|Q13332-2|PTPRS;REV__nc|ENSG00000105426|Q13332-3|PTPRS;REV__nc|ENSG00000105426|Q13332-4|PTPRS;REV__nc|ENSG00000105426|Q13332-5|PTPRS;REV__nc|ENSG00000105426|Q13332-6|PTPRS;REV__nc|ENSG00000105426|Q13332-7|PTPRS;REV__PTPRS|p.P676Rfs*134|2|0.2|ENSG00000105426|chr19:5231438-5231438|G/-|frameshift_variant;REV__PTPRS|p.S414Afs*30|3|0.23|ENSG00000105426|chr19:5244238-5244238|C/-|frameshift_variant	35.200714571348534	0.2998460331538257	2				NaN	NaN	0	NaN	10924	4408	15333
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15339	40.248	NaN	4200.5	30	0	815.87	0.214	+			32905	RDSVLIQTL	9	70	522.8061011124624	1043.5976492917248	2	522.8056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RDSVLIQTL_	ENSG00000148843|ENST00000369797|PDCD11	53.08895987439943	0.27122541748218487	2				NaN	NaN	0	NaN	10926	4411	15338
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15340	40.251	NaN	2206.3	30	0	240.72	0.106			+	-1	MRLVMQLV	8	60	503.28202278877103	1004.5494926443421	2	503.28173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_MRLVM(Oxidation (M))QLV_	REV__ENST00000420851.6_1_3:195435625-195438442:+|nuORF	40.5726180659479	0.6527593143185008	2				NaN	NaN	0	NaN	10927	4411	15338
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15341	40.253	NaN	1609.9	30	0	151.81	0.106			+	26779	LVRELKET	8	57	494.2948720516783	986.5751911701566	2	494.2952575683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LVRELKET_	REV__ENSG00000133131|ENST00000355610|MORC4;REV__ENST00000478924.1_1_X:106185151-106185807:-|nuORF;REV__nc|ENSG00000133131|Q8TE76-2|MORC4;REV__nc|ENSG00000133131|Q8TE76-3|MORC4	24.20275056022122	0.7724576178584145	2				NaN	NaN	0	NaN	10928	4411	15338
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15342	40.255	NaN	1108.7	30	0	97.365	0.032				-1	CGSSCCSCCW	10	54	384.7719059413609	NaN	0	384.7721252441406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_CGSSCCSC(Carbamidomethyl (C))C(Carbamidomethyl (C))W_	ENST00000228741.7_1_12:96588285-96617411:+|nuORF	11.096761811581379	0.4201028297492154	2				NaN	NaN	0	NaN	10929	4411	15338
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15349	40.273	NaN	3643.3	30	0	531.05	0.214	+			21982	KSEQFKKTL	9	66	554.8217824002178	1107.6290118672355	2	554.8218383789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSEQFKKTL_	ENSG00000138780|ENST00000515279|GSTCD;GSTCD|p.N625Kfs*2|1|0.33|ENSG00000138780|chr4:105845544-105845545|-/A|frameshift_variant;nc|ENSG00000138780|Q8NEC7-3|GSTCD	37.81151784470057	0.4459294069877048	2				NaN	NaN	0	NaN	10933	4414	15348
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15350	40.277	NaN	2054.9	30	0	292.81	0.033			+	-1	CGPDVSHK	8	57	442.7010709628749	883.3875889925498	2	442.700927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))CGPDVSHK_	REV__ENSG00000250254|ENST00000504686|PTTG2	42.47446043378293	0.6409579893742323	2				NaN	NaN	0	NaN	10934	4414	15348
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15356	40.293	NaN	2958.3	30	0	342.66	0.214	+			30374	PVLLQFDPE	9	64	529.2823382080343	1056.5501234828685	2	529.7845458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PVLLQFDPE_	CFAP47|p.G416Efs*26|1|0.04|ENSG00000165164|chrX:35956032-35956033|-/AATATATTTGCTTA|frameshift_variant	44.116797842482775	0.37197099687881774	2				NaN	NaN	0	NaN	10937	4417	15355
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15357	40.296	NaN	2300.9	30	0	205.55	0.037			+	-1	EMLTLHHYL	9	54	586.7914285831527	NaN	0	586.7920532226562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_EM(Oxidation (M))LTLHHYL_	REV__DUSP26|p.V176M|1|0.32|ENSG00000133878|chr8:33592123-33592123|C/T|missense_variant	31.954861631926434	0.3162336699109506	2				NaN	NaN	0	NaN	10938	4417	15355
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15362	40.311	NaN	3983.2	30	0	424.8	0.214	+			3077	ASFSVVGMVK	10	61	512.7781011108	1023.5416492884	2	512.7779541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASFSVVGMVK_	ENSG00000109501|ENST00000226760|WFS1;ENST00000507765.1_1_4:6290695-6304192:+|nuORF	117.81106730687013	0.030421278947300796	2				NaN	NaN	0	NaN	10940	4420	15361
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15363	40.315	NaN	4054	30	0	474.31	0.106	+			5925	AVLFTYVGK	9	71	499.289747348566	996.564941763932	2	499.28973388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVLFTYVGK_	ENSG00000117480|ENST00000243167|FAAH;ENST00000468718.5_1_1:46860020-46871294:+|nuORF;ENST00000493735.5_1_1:46860047-46871467:+|nuORF	58.22992032128504	0.22837015374068087	2				NaN	NaN	0	NaN	10941	4420	15361
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15364	40.317	NaN	1867.1	30	0	311.14	0.034	+			14722	GTIPQIFGK	9	61	480.7776680204085	959.540783107617	2	480.77899169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTIPQIFGK_	ENSG00000139719|ENST00000267199|VPS33A;ENST00000542790.1_1_12:122734385-122735751:-|nuORF;ENST00000544349.5_1_12:122735394-122750988:-|nuORF;VPS33A|p.F371Lfs*4|1|0.18|ENSG00000139719|chr12:122239929-122239929|A/-|frameshift_variant;VPS33A|p.G459Afs*86|7|0.14|ENSG00000139719|chr12:122235850-122235850|C/-|frameshift_variant;VPS33A|p.G552Afs*2|1|0.26|ENSG00000139719|chr12:122232382-122232382|C/-|frameshift_variant;VPS33A|p.R460Qfs*17|2|0.28|ENSG00000139719|chr12:122235849-122235850|-/C|frameshift_variant	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	10942	4420	15361
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15374	40.338	NaN	10809	30	0	1134.9	0.214	+			28324	NEFVHINNL	9	74	550.2802784378162	1098.5460039424322	2	550.2803344726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NEFVHINNL_	ENSG00000119414|ENST00000373547|PPP6C;nc|ENSG00000119414|O00743-2|PPP6C;nc|ENSG00000119414|O00743-3|PPP6C	96.0336014099291	0.047854655524928534	2				NaN	NaN	0	NaN	10949	4423	15373
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15375	40.342	NaN	1307.8	30	0	153.5	0.106	+			11165	FGPGPGSNF	9	48	440.2031449407154	NaN	0	440.2030029296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FGPGPGSNF_	ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;ENST00000495810.1_1_7:26235422-26236427:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1	37.15910966729921	0.2899585034171616	2				NaN	NaN	0	NaN	10950	4423	15373
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15376	40.344	NaN	1740.7	30	0	288.62	0.034	+			34520	RVGMSLVAL	9	51	473.2791453431958	NaN	0	473.2794189453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RVGMSLVAL_	ENSG00000187475|ENST00000338379|H1-6	27.882242232435846	0.3367954786602879	2				NaN	NaN	0	NaN	10951	4423	15373
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15381	40.358	NaN	4176.1	30	0	451.12	0.214	+			20369	KESSTVFEL	9	62	520.2691278793112	1038.5237028254223	2	520.2689208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KESSTVFEL_	ENSG00000103363|ENST00000409906|ELOB;nc|ENSG00000103363|Q15370-2|ELOB	79.71258880314673	0.09879134589249085	2				NaN	NaN	0	NaN	10953	4426	15380
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15382	40.362	NaN	4449.6	30	0	650.32	0.106			+	25461	LPQLPGEK	8	59	441.25810394819655	880.5016549631931	2	441.2578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LPQLPGEK_	REV__ENSG00000135749|ENST00000258229|PCNX2;REV__ENST00000324142.4_1_1:233337898-233388268:-|nuORF;REV__nc|ENSG00000135749|A6NKB5-2|PCNX2	49.44154591367651	0.597725784090933	2				NaN	NaN	0	NaN	10954	4426	15380
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15383	40.364	NaN	3673.8	30	0	1025.6	0.106				-1	QRVEMTCPRL	10	60	645.3261510983832	1288.6377492635663	2	645.32666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_QRVEMTC(Carbamidomethyl (C))PRL_	ENST00000574522.5_1_17:18759682-18768852:+|nuORF	17.468008924990375	0.7276870902328821	2				NaN	NaN	0	NaN	10955	4426	15380
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15384	40.366	NaN	3939.4	30	0	1173.5	0.106			+	25044	LLISGQSLLA	10	67	507.81340153862664	1013.6122501440533	2	507.8133850097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LLISGQSLLA_	REV__ENSG00000160883|ENST00000292432|HK3;REV__HK3|p.E758Gfs*38|1|0.37|ENSG00000160883|chr5:176881812-176881813|-/C|frameshift_variant	31.529811441608018	0.6223461015008678	2				NaN	NaN	0	NaN	10956	4426	15380
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15385	40.368	NaN	3545.1	30	0	337.45	0.106			+	11838	FSWRLQLR	8	66	553.3161872359318	1104.6178215386635	2	553.3164672851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FSWRLQLR_	REV__ENST00000482320.5_1_7:128681673-128694729:-|nuORF	49.44154591367651	0.597725784090933	2				NaN	NaN	0	NaN	10957	4426	15380
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15386	40.369	NaN	2465.8	30	0	273.56	0.036	+			50744	YEKILFTEA	9	66	557.2947060722033	1112.5748592112066	2	557.2938842773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YEKILFTEA_	ENSG00000099341|ENST00000215071|PSMD8	68.84614121027924	0.14577793175421136	2				NaN	NaN	0	NaN	10958	4426	15380
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15393	40.386	NaN	4431.9	30	0	598.66	0.214	+			28005	MVVVRLSPV	9	70	500.30445917936083	998.5943654255217	2	500.3045959472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MVVVRLSPV_	ENST00000441964.1_1_3:43122946-43132044:-|nuORF	40.77816245573522	0.41113185337114944	2				NaN	NaN	0	NaN	10962	4429	15392
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15394	40.389	NaN	1980.9	30	0	298.54	0.106			+	49686	VYKGTDLVA	9	50	483.2690555431076	964.5235581530152	2	483.2735290527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYKGTDLVA_	REV__ENSG00000138095|ENST00000260665|LRPPRC	42.86426827375447	0.38666266728046506	2				NaN	NaN	0	NaN	10963	4429	15392
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15395	40.391	NaN	2323.1	30	0	558.77	0.106				-1	AYCPPRFPP	9	52	368.84774768239015	1103.5214136473705	3	368.8480529785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_AYC(Carbamidomethyl (C))PPRFPP_	ENSG00000115155|ENST00000272371|OTOF;nc|ENSG00000115155|Q9HC10-2|OTOF;nc|ENSG00000115155|Q9HC10-3|OTOF;nc|ENSG00000115155|Q9HC10-4|OTOF;nc|ENSG00000115155|Q9HC10-5|OTOF;OTOF|p.E1062K|1|0.41|ENSG00000115155|chr2:26474617-26474617|C/T|missense_variant;OTOF|p.N1149Rfs*28|1|0.56|ENSG00000115155|chr2:26473530-26473531|-/C|frameshift_variant	21.9598887501803	0.5980208138527809	2				NaN	NaN	0	NaN	10964	4429	15392
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15396	40.393	NaN	3550.7	30	0	600.1	0.106			+	6711	CAAKWMQIL	9	65	532.2765034918535	1062.538454050507	2	532.2758178710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_CAAKWMQIL_	REV__ENSG00000117501|ENST00000367759|MROH9;REV__MROH9|p.L759*|1|0.19|ENSG00000117501|chr1:171025412-171025412|T/-|frameshift_variant;REV__MROH9|p.L824Cfs*10|1|0.03|ENSG00000117501|chr1:171064224-171064224|T/-|frameshift_variant;REV__nc|ENSG00000117501|Q5TGP6|MROH9	65.80317337860623	0.1652391959156183	2				NaN	NaN	0	NaN	10965	4429	15392
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15397	40.395	NaN	1197.6	30	0	196.34	0.032	+			45388	TVTLTVAV	8	50	402.24739520571427	NaN	0	402.2475891113281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TVTLTVAV_	ENSG00000081853|ENST00000394576|PCDHGA2;ENSG00000204956|ENST00000517417|PCDHGA1;ENSG00000253159|ENST00000252085|PCDHGA12;ENSG00000253537|ENST00000518325|PCDHGA7;ENSG00000253731|ENST00000517434|PCDHGA6;ENSG00000253767|ENST00000398604|PCDHGA8;ENSG00000253846|ENST00000398610|PCDHGA10;ENSG00000253873|ENST00000398587|PCDHGA11;ENSG00000254245|ENST00000253812|PCDHGA3;ENSG00000262576|ENST00000571252|PCDHGA4;nc|ENSG00000081853|Q9Y5H1-2|PCDHGA2;nc|ENSG00000204956|Q9Y5H4-2|PCDHGA1;nc|ENSG00000253159|O60330-2|PCDHGA12;nc|ENSG00000253537|Q9Y5G6-2|PCDHGA7;nc|ENSG00000253731|Q9Y5G7-2|PCDHGA6;nc|ENSG00000253767|Q9Y5G5-2|PCDHGA8;nc|ENSG00000253846|Q9Y5H3-2|PCDHGA10;nc|ENSG00000253873|Q9Y5H2-2|PCDHGA11;nc|ENSG00000254245|Q9Y5H0-2|PCDHGA3;nc|ENSG00000262576|Q9Y5G9-2|PCDHGA4;PCDHGA1|p.Q772Sfs*79|1|0.05|ENSG00000204956|chr5:141332994-141332994|C/-|frameshift_variant;PCDHGA10|p.S671I|1|0.3|ENSG00000253846|chr5:141415187-141415187|G/T|missense_variant;PCDHGA11|p.R724Afs*19|1|0.34|ENSG00000253873|chr5:141423397-141423397|C/-|frameshift_variant;PCDHGA2|p.A656T|1|0.24|ENSG00000081853|chr5:141340937-141340937|G/A|missense_variant;PCDHGA2|p.K788Rfs*64|1|0.06|ENSG00000081853|chr5:141341330-141341330|A/-|frameshift_variant;PCDHGA6|p.F770Sfs*23|1|0.29|ENSG00000253731|chr5:141376389-141376389|T/-|frameshift_variant;PCDHGA7|p.V757Sfs*12|1|0.31|ENSG00000253537|chr5:141385167-141385167|G/-|frameshift_variant;PCDHGA8|p.L712Sfs*33|1|0.15|ENSG00000253767|chr5:141394944-141394945|-/T|frameshift_variant;PCDHGA8|p.N788Kfs*2|1|0.27|ENSG00000253767|chr5:141395171-141395172|-/A|frameshift_variant	83.28718786952967	1.7418937515398478	2				NaN	NaN	0	NaN	10966	4429	15392
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15402	40.409	NaN	5321.4	30	0	804.54	0.144			+	11731	FSERVAQLI	9	75	531.8011030398967	1061.5876531465933	2	531.8014526367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FSERVAQLI_	REV__ENST00000560708.5_1_15:89021278-89021398:+|nuORF	42.396135135203025	0.392153681582562	2				NaN	NaN	0	NaN	10968	4432	15401
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15408	40.427	NaN	6632.9	30	0	630.5	0.214	+			36213	SELRFTQL	8	75	497.2719211055434	992.5292892778868	2	497.2716064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SELRFTQL_	ENSG00000137857|ENST00000389037|DUOX1;ENSG00000140279|ENST00000389039|DUOX2;ENST00000557893.5_1_15:45440187-45444854:+|nuORF;ENST00000558383.1_1_15:45393877-45400429:-|nuORF;ENST00000561220.6_1_15:45434150-45457096:+|nuORF;nc|ENSG00000137857|Q9NRD9-2|DUOX1;nc|ENSG00000140279|Q9NRD8|DUOX2	85.16082228582465	0.29211966821764696	2				NaN	NaN	0	NaN	10971	4435	15407
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15409	40.431	NaN	3143.7	30	0	309.23	0.106			+	-1	VTMIMLVTVG	10	72	548.2945654798721	1094.574578026544	2	548.2954711914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Oxidation (M)	_VTM(Oxidation (M))IM(Oxidation (M))LVTVG_	REV__tr|U7T1S7|U7T1S7_FUSNUTRAPC4-dicarboxylatetransportsystempermeaseDctMsubunitdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00560PE=4SV=1	64.20726635412375	0.3275756395432415	2				NaN	NaN	0	NaN	10972	4435	15407
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15410	40.433	NaN	2515.1	30	0	311.09	0.106			+	-1	NESLLRSML	9	61	539.7804437488027	NaN	0	539.7798461914062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_NESLLRSM(Oxidation (M))L_	REV__ENSG00000160284|ENST00000291672|SPATC1L	37.81151784470057	0.28666463014928195	2				NaN	NaN	0	NaN	10973	4435	15407
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15411	40.435	NaN	2813.1	30	0	386.02	0.035	+			35944	SEGKLIYTL	9	66	512.2896323903932	1022.5647118475864	2	512.2893676757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SEGKLIYTL_	ABCA8|p.L1128*|1|0.37|ENSG00000141338|chr17:68885242-68885242|A/-|frameshift_variant;ENSG00000141338|ENST00000586539|ABCA8;ENST00000541225.5_1_17:66883094-66937097:-|nuORF;nc|ENSG00000141338|O94911-1|ABCA8	52.936696900407355	0.27249468807391813	2				NaN	NaN	0	NaN	10974	4435	15407
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15420	40.455	NaN	7325.3	30	0	1099.7	0.214	+			38224	SQIIKEFK	8	77	496.79243923524007	991.5703255372802	2	496.7920837402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SQIIKEFK_	tr|U7ST86|U7ST86_FUSNUATP-dependentDNAhelicaseDinGOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01328PE=3SV=1	93.19546047674547	0.2677966331495483	2				NaN	NaN	0	NaN	10980	4438	15419
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15421	40.458	NaN	2212.7	30	0	309.87	0.106	+			30075	PQLQSPMY	8	55	482.2335756855024	962.4525984378048	2	482.2334899902344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PQLQSPMY_	ENSG00000150269|ENST00000279791|OR5M9	31.954861631926434	0.7126016770032289	2				NaN	NaN	0	NaN	10981	4438	15419
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15422	40.46	NaN	2994	30	0	347.59	0.106			+	-1	LGSDLKKNTLC	11	75	624.8327085378978	1247.6508641425955	2	624.8330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LGSDLKKNTLC(Carbamidomethyl (C))_	REV__ENST00000341259.6_1_12:111886950-111887028:+|nuORF	27.047317107675042	0.7060868989289394	2				NaN	NaN	0	NaN	10982	4438	15419
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15423	40.462	NaN	1859.2	30	0	264.35	0.106	+			30961	QENVLQRV	8	59	493.27680776830704	NaN	0	493.2769470214844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QENVLQRV_	ENSG00000166819|ENST00000300055|PLIN1;PLIN1|p.P109Lfs*8|1|0.27|ENSG00000166819|chr15:89671489-89671489|G/-|frameshift_variant	56.72105179125745	1.7418937515398478	2				NaN	NaN	0	NaN	10983	4438	15419
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15424	40.464	NaN	2986.8	30	0	295.4	0.106				-1	QFSGWMDSM	9	66	552.7098337761827	1103.4051146191653	2	552.7095336914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_QFSGWMDSM(Oxidation (M))_	ENSG00000131018|ENST00000367255|SYNE1;ENST00000471834.1_1_6:152657861-152688565:-|nuORF;nc|ENSG00000131018|Q8NF91-4|SYNE1;nc|ENSG00000131018|Q8NF91-7|SYNE1;SYNE1|p.A3854Lfs*20|1|0.4|ENSG00000131018|chr6:152352048-152352048|T/-|frameshift_variant;SYNE1|p.E4738Kfs*25|1|0.12|ENSG00000131018|chr6:152330474-152330474|T/-|frameshift_variant;SYNE1|p.E5862Gfs*83|1|0.12|ENSG00000131018|chr6:152300729-152300738|CCAGACTCCT/-|frameshift_variant;SYNE1|p.G6773Wfs*7|1|0.44|ENSG00000131018|chr6:152236186-152236187|-/A|frameshift_variant;SYNE1|p.K3606Sfs*5|1|0.25|ENSG00000131018|chr6:152354768-152354768|T/-|frameshift_variant;SYNE1|p.K6871Rfs*22|2|0.52|ENSG00000131018|chr6:152233881-152233881|T/-|frameshift_variant;SYNE1|p.L8283Pfs*8|1|0.19|ENSG00000131018|chr6:152148173-152148174|-/G|frameshift_variant;SYNE1|p.M5602Nfs*13|2|0.32|ENSG00000131018|chr6:152310779-152310780|-/T|frameshift_variant;SYNE1|p.V8635Sfs*12|1|0.15|ENSG00000131018|chr6:152133375-152133375|T/-|frameshift_variant	45.9519527083369	0.35044536499095585	2				NaN	NaN	0	NaN	10984	4438	15419
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15425	40.466	NaN	1902.2	30	0	91.626	0.044				-1	WMRRMRILCWL	11	80	826.9143606527101	NaN	0	826.912109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),2 Oxidation (M)	_WM(Oxidation (M))RRM(Oxidation (M))RILC(Carbamidomethyl (C))WL_	ENST00000418154.1_1_1:64254543-64254969:-|nuORF	10.265252068803164	0.456735970842152	2				NaN	NaN	0	NaN	10985	4438	15419
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15431	40.482	NaN	1987.3	30	0	368.07	0.214				-1	FPTLLNGHM	9	58	523.2609485962602	NaN	0	523.260986328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_FPTLLNGHM(Oxidation (M))_	ENSG00000111145|ENST00000228741|ELK3;ENST00000549529.1_1_12:96649292-96660955:+|nuORF	40.5726180659479	0.27166212580479165	2				NaN	NaN	0	NaN	10988	4441	15430
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15432	40.485	NaN	2283.7	30	0	308.44	0.106			+	21673	KQAVIQGLT	9	55	479.2904300873297	956.5663072414594	2	479.7914733886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KQAVIQGLT_	REV__ENSG00000178773|ENST00000319518|CPNE7	40.77816245573522	0.41113185337114944	2				NaN	NaN	0	NaN	10989	4441	15430
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15433	40.487	NaN	1540	30	0	195.17	0.106				-1	 	0	61	516.3015720635251	515.294295596925	1	516.3001098632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10990	4441	15430
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15434	40.489	NaN	2379.3	30	0	135.32	0.04	+			33572	RLILEQHRSTL	11	75	683.399169921875	NaN	0	683.399169921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RLILEQHRSTL_	sp|P16784|ITP_HCMVAInnertegumentproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL47PE=1SV=2;sp|Q6SW85|ITP_HCMVMInnertegumentproteinOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL47PE=3SV=1	26.063383197487333	0.44926255568796863	2				NaN	NaN	0	NaN	10991	4441	15430
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15443	40.511	NaN	7488.3	30	0	1362.6	0.214	+			7306	DASKVVTVF	9	63	483.2690555431076	964.5235581530152	2	483.2686462402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DASKVVTVF_	ENSG00000071127|ENST00000499869|WDR1;ENST00000502962.5_1_4:10077004-10094774:-|nuORF;ENST00000515743.5_1_4:10078742-10093271:-|nuORF;nc|ENSG00000071127|O75083-3|WDR1	96.66504779109242	0.04607440320619715	2				NaN	NaN	0	NaN	10997	4444	15442
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15444	40.514	NaN	5675.4	30	0	1212.9	0.106				-1	 	0	49	336.5341033168387	1006.5804805507162	3	336.5343017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10998	4444	15442
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15445	40.516	NaN	2365.5	30	0	173.97	0.106				-1	 	0	63	499.27489114402374	498.26761467742375	1	499.2745361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	10999	4444	15442
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15446	40.518	NaN	1788.4	30	0	223.44	0.106				-1	 	0	38	375.18718206281096	374.179905596211	1	375.1875305175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11000	4444	15442
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15447	40.52	NaN	2039.6	30	0	129.05	0.106			+	18399	IRPLIAEG	8	59	434.76622901453055	867.5179050958611	2	434.76580810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IRPLIAEG_	REV__CFTR|p.E1044Dfs*20|1|0.04|ENSG00000001626|chr7:117610661-117610662|-/TCAAAGAAAAC|frameshift_variant;REV__CFTR|p.G1208Afs*3|1|0.3|ENSG00000001626|chr7:117627672-117627672|G/-|frameshift_variant;REV__CFTR|p.L1258Ffs*7|1|0.26|ENSG00000001626|chr7:117642487-117642488|-/T|frameshift_variant;REV__CFTR|p.S1297Lfs*31|1|0.28|ENSG00000001626|chr7:117652852-117652852|T/-|frameshift_variant;REV__ENSG00000001626|ENST00000003084|CFTR;REV__nc|ENSG00000001626|P13569-2|CFTR	31.954861631926434	0.7126016770032289	2				NaN	NaN	0	NaN	11001	4444	15442
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15448	40.522	NaN	2804.1	30	0	245.53	0.106	+			18006	IIERVTGLPA	10	68	534.8245310922033	1067.6345092512065	2	534.8251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IIERVTGLPA_	ENSG00000204711|ENST00000377197|CFAP95;ENST00000466872.2_1_9:72435815-72501795:+|nuORF;ENST00000495399.1_1_9:72435845-72472969:+|nuORF;ENST00000529131.5_1_9:72435824-72520897:+|nuORF;nc|ENSG00000204711|Q5VTT2-2|CFAP95	56.43379154798735	0.3982744522255666	2				NaN	NaN	0	NaN	11002	4444	15442
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15449	40.524	NaN	2024.9	30	0	224.68	0.037			+	16713	HLDLPSVDQF	10	58	585.7934932145521	1169.572433495904	2	585.7932739257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HLDLPSVDQF_	REV__ENST00000509721.1_1_5:146257648-146464194:-|nuORF	62.107414245175825	0.3466735403679669	2				NaN	NaN	0	NaN	11003	4444	15442
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15456	40.542	NaN	3114.8	30	0	470.49	0.211			+	-1	KRKYIIYTIYM	11	73	754.4190040099026	1506.823455086605	2	754.4164428710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_KRKYIIYTIYM(Oxidation (M))_	REV__tr|U7T1W4|U7T1W4_FUSNUMATEeffluxfamilyproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00610PE=4SV=1	12.206681093483082	0.8133326165653908	2				NaN	NaN	0	NaN	11007	4447	15455
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15457	40.545	NaN	3194.1	30	0	591.03	0.106				-1	YAFFECKR	8	45	374.1794313069364	1119.5164645210093	3	374.1794738769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_YAFFEC(Carbamidomethyl (C))KR_	ENSG00000183513|ENST00000328709|COA5;ENST00000466848.1_1_2:99217217-99222254:-|nuORF;ENST00000483527.5_1_2:99217217-99224734:-|nuORF	19.359975847455235	0.7988239741663654	2				NaN	NaN	0	NaN	11008	4447	15455
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15458	40.547	NaN	1637.6	30	0	180.11	0.106			+	9629	ELQLVALLQ	9	58	513.8134165866996	1025.6122802401992	2	513.813720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ELQLVALLQ_	REV__ENST00000442940.1_1_X:7894156-7895742:-|nuORF	31.529811441608018	0.5085848003137583	2				NaN	NaN	0	NaN	11009	4447	15455
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15459	40.549	NaN	2183.5	30	0	196.67	0.035			+	23848	LDAVLKNQL	9	64	507.30215023164857	NaN	0	507.3029479980469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LDAVLKNQL_	REV__ENST00000343267.7_1_3:195295585-195295624:-|nuORF	47.657333605630114	0.2228375344433429	2				NaN	NaN	0	NaN	11010	4447	15455
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15467	40.569	NaN	7140.7	30	0	4349.7	0.214			+	13701	GPQVHGTFF	9	56	495.24766407831487	988.4807752234298	2	495.24786376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GPQVHGTFF_	REV__DCP1B|p.P331H|1|0.27|ENSG00000151065|chr12:1952948-1952948|G/T|missense_variant	42.396135135203025	0.392153681582562	2				NaN	NaN	0	NaN	11015	4450	15466
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15468	40.572	NaN	3770.4	30	0	430.28	0.106			+	24642	LGSVERFSR	9	70	525.7861966247901	NaN	0	525.7861328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LGSVERFSR_	REV__nc|nan|Q5SNV9-3|C1orf167	45.97224482568171	0.23445038899310136	2				NaN	NaN	0	NaN	11016	4450	15466
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15469	40.574	NaN	2134.3	30	0	337.97	0.034	+			27118	MAPLGNTPM	9	52	466.2221548210157	NaN	0	466.22161865234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MAPLGNTPM_	ENSG00000113282|ENST00000411809|CLINT1;ENST00000522381.1_1_5:157214656-157215007:-|nuORF;nc|ENSG00000113282|Q14677-2|CLINT1;nc|ENSG00000113282|Q14677-3|CLINT1	47.657333605630114	0.2228375344433429	2				NaN	NaN	0	NaN	11017	4450	15466
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15480	40.599	NaN	5301.2	30	0	890.2	0.214			+	-1	ERCGMTLII	9	72	546.7806888651388	1091.5468247970775	2	546.78125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_ERC(Carbamidomethyl (C))GMTLII_	REV__tr|U7T2Q7|U7T2Q7_FUSNUFAD/NAD(P)-bindingdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00423PE=4SV=1	79.45101966838831	0.09992237243120712	2				NaN	NaN	0	NaN	11025	4453	15479
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15481	40.603	NaN	3089.8	30	0	894.02	0.106	+			42053	SWVKGPLSPE	10	65	550.2926255187256	1098.570698104251	2	550.7938842773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SWVKGPLSPE_	ENSG00000187994|ENST00000591812|RINL;ENST00000589111.5_1_19:39359746-39361880:-|nuORF;nc|ENSG00000187994|Q6ZS11-2|RINL	32.81241826257853	0.6118718159329168	2				NaN	NaN	0	NaN	11026	4453	15479
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15482	40.605	NaN	1848.6	30	0	186.77	0.106			+	-1	PPPGMLMPM	9	57	509.72530899289706	1017.4360650525941	2	509.7253723144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	3 Oxidation (M)	_PPPGM(Oxidation (M))LM(Oxidation (M))PM(Oxidation (M))_	REV__ENSG00000065357|ENST00000331886|DGKA;REV__ENST00000548491.1_1_12:56347119-56347549:+|nuORF;REV__ENST00000552478.5_1_12:56347447-56347549:+|nuORF	29.841539824830324	0.5243625958137083	2				NaN	NaN	0	NaN	11027	4453	15479
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15483	40.607	NaN	1561.5	30	0	160.62	0.106				-1	CGSSCCSCCW	10	51	384.7719059413609	NaN	0	384.7722473144531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_CGSSCCSC(Carbamidomethyl (C))C(Carbamidomethyl (C))W_	ENST00000228741.7_1_12:96588285-96617411:+|nuORF	1.8869224993972666	0.4201028297492154	2				NaN	NaN	0	NaN	11028	4453	15479
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15484	40.608	NaN	2357.9	30	0	233.86	0.036			+	46921	VIVVVVFIKG	10	57	536.8604736328125	NaN	0	536.8604736328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VIVVVVFIKG_	REV__ENST00000537717.1_1_12:15370321-15370423:-|nuORF	23.04248740728303	0.42010282974921537	2				NaN	NaN	0	NaN	11029	4453	15479
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15490	40.624	NaN	3046.6	30	0	202.38	0.214	+			50720	YEGSPIKVTL	10	72	553.8079291728137	1105.6013054124273	2	553.80810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YEGSPIKVTL_	ENSG00000181163|ENST00000296930|NPM1;ENST00000502784.2_1_5:93019019-93019256:-|nuORF;ENST00000513394.1_1_8:57014234-57014760:-|nuORF;ENST00000518587.1_1_5:170814889-170819841:+|nuORF;ENST00000521260.1_1_5:170818338-170818467:+|nuORF;nc|ENSG00000181163|P06748-2|NPM1;nc|ENSG00000181163|P06748-3|NPM1;NPM1|p.A160Tfs*3|1|0.11|ENSG00000181163|chr5:171392931-171392932|-/ACCA|frameshift_variant	66.96192283764107	0.30252237217063654	2				NaN	NaN	0	NaN	11032	4456	15489
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15491	40.628	NaN	1466.4	30	0	237.02	0.106			+	28260	NDMHLRDE	8	56	515.2265625	NaN	0	515.2265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NDMHLRDE_	REV__ENSG00000159267|ENST00000674895|HLCS;REV__nc|ENSG00000159267|P50747|HLCS	35.61828744233558	1.7418937515398478	2				NaN	NaN	0	NaN	11033	4456	15489
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15492	40.63	NaN	1413.9	30	0	161.92	0.034			+	-1	SDEEANMK	8	48	470.1877907534848	NaN	0	470.18719482421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_SDEEANM(Oxidation (M))K_	REV__ENSG00000135899|ENST00000258381|SP110;REV__ENST00000486146.2_1_2:231068050-231077551:-|nuORF;REV__nc|ENSG00000135899|Q9HB58-3|SP110;REV__nc|ENSG00000135899|Q9HB58-5|SP110;REV__nc|ENSG00000135899|Q9HB58-7|SP110;REV__nc|ENSG00000135899|Q9HB58|SP110	25.450171626174864	1.7418937515398478	2				NaN	NaN	0	NaN	11034	4456	15489
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15499	40.646	NaN	8811.4	30	0	1154.5	0.214	+			34746	RYALQMEQL	9	78	576.2974832542558	1150.5804135753115	2	576.2977294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RYALQMEQL_	ENSG00000111057|ENST00000388835|KRT18;ENST00000411618.1_1_9:30799684-30799825:-|nuORF;ENST00000549078.5_1_12:53344429-53346127:+|nuORF	150.36159442982594	0.006784847064083231	2				NaN	NaN	0	NaN	11038	4459	15498
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15500	40.65	NaN	1468.3	30	0	206.72	0.106	+			39838	STLLAPKS	8	51	408.7460421995139	NaN	0	408.7463073730469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STLLAPKS_	ENST00000393658.6_1_4:176556009-176556105:-|nuORF	24.20275056022122	1.7418937515398478	2				NaN	NaN	0	NaN	11039	4459	15498
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15501	40.652	NaN	2173.5	30	0	170.22	0.106	+			27338	MIHLRVSLLWP	11	77	682.8975849582341	1363.7806169832681	2	682.8958129882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MIHLRVSLLWP_	ENST00000542452.1_1_11:73727738-73744892:-|nuORF	32.81241826257853	0.645615689454792	2				NaN	NaN	0	NaN	11040	4459	15498
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15502	40.654	NaN	1808.2	30	0	366.84	0.034			+	42965	TEKECLSF	8	50	478.72468699881915	955.4348210644383	2	478.6922302246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TEKECLSF_	REV__nc|ENSG00000187098|O75030-5|MITF;REV__nc|ENSG00000187098|O75030-6|MITF	30.503639358989545	0.7238069182250283	2				NaN	NaN	0	NaN	11041	4459	15498
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15509	40.671	NaN	4905.1	30	0	902.1	0.214	+			36352	SESTLALRL	9	68	495.28535160793626	988.5561502826725	2	495.2851257324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SESTLALRL_	DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;ENSG00000187908|ENST00000338354|DMBT1;nc|ENSG00000187908|Q9UGM3-2|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-4|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-8|DMBT1;nc|ENSG00000187908|Q9UGM3-9|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1	107.00750918261382	0.032051501805654005	2				NaN	NaN	0	NaN	11045	4462	15508
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15510	40.675	NaN	2659	30	0	298.49	0.106	+			27144	MAVEHPQG	8	61	434.7032677171291	867.3919825010582	2	434.703369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MAVEHPQG_	ENST00000432005.6_1_19:37342773-37383818:+|nuORF;ENST00000529989.1_1_19:37342773-37383898:+|nuORF;ENST00000586646.1_3_19:37342773-37353875:+|nuORF;ENST00000586933.5_1_19:37342773-37363470:+|nuORF;ENST00000589046.1_1_19:37342773-37367701:+|nuORF	71.29570347882199	0.39610197767395533	2				NaN	NaN	0	NaN	11046	4462	15508
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15511	40.677	NaN	2970.1	30	0	511.67	0.035	+			12927	GESLHGYRI	9	59	516.266845703125	NaN	0	516.266845703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GESLHGYRI_	ENSG00000119777|ENST00000238788|TMEM214;nc|ENSG00000119777|Q6NUQ4-2|TMEM214	37.15910966729921	0.2899585034171616	2				NaN	NaN	0	NaN	11047	4462	15508
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15528	40.729	NaN	2583.6	30	0	619.68	0.145			+	-1	SMFLLVTDY	9	55	368.84774768239015	1103.5214136473705	3	368.8480224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_SM(Oxidation (M))FLLVTDY_	REV__GRID2|p.L334Ffs*52|1|0.05|ENSG00000152208|chr4:93224649-93224650|-/TTCATGTCATA|frameshift_variant	26.69291269510374	0.5537881896960711	2				NaN	NaN	0	NaN	11055	4471	15527
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15538	40.764	NaN	5615.7	30	0	773.01	0.215	+			43011	TEKQLQVLL	9	72	536.3242118422786	1070.633870751357	2	536.3239135742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEKQLQVLL_	ENSG00000120800|ENST00000261637|UTP20	79.71258880314673	0.09879134589249085	2				NaN	NaN	0	NaN	11059	4477	15537
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15539	40.767	NaN	2252.3	30	0	303.55	0.106			+	-1	VFGALMKPI	9	52	496.286287258332	990.558021583464	2	496.2861022949219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_VFGALM(Oxidation (M))KPI_	REV__ENSG00000184933|ENST00000641196|OR6A2	33.51558372728122	0.4900267029546261	2				NaN	NaN	0	NaN	11060	4477	15537
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15540	40.769	NaN	1852.4	30	0	157.14	0.106	+			18847	IVALILSTK	9	53	479.3210444559072	956.6275359786144	2	479.32037353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IVALILSTK_	ENSG00000185883|ENST00000330398|ATP6V0C	66.42927471994793	0.16001998865088202	2				NaN	NaN	0	NaN	11061	4477	15537
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15541	40.771	NaN	2556.4	30	0	133.42	0.036	+			13611	GLWWNPAPY	9	64	552.2692877858863	1102.5240226385724	2	552.2691650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GLWWNPAPY_	ENST00000560804.6_3_19:42595706-42595865:-|nuORF;nc|ENSG00000028277|P09086-3|POU2F2;nc|ENSG00000028277|P09086|POU2F2	40.77816245573522	0.41113185337114944	2				NaN	NaN	0	NaN	11062	4477	15537
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15546	40.785	NaN	5781.7	30	0	562.14	0.214	+			3433	ASQLGIFISK	10	63	532.3109484272869	1062.6073439213737	2	532.31103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASQLGIFISK_	ENSG00000120509|ENST00000239666|PDZD11;nc|ENSG00000120509|Q5EBL8-2|PDZD11	133.7523857240709	0.012419833933541829	2				NaN	NaN	0	NaN	11064	4480	15545
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15547	40.789	NaN	3355.9	30	0	261.05	0.106	+			23337	KYSNMEQSLF	10	65	623.7911591729784	1245.5677654127567	2	623.7915649414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KYSNMEQSLF_	AQR|p.K1234Sfs*17|1|0.35|ENSG00000021776|chr15:34870819-34870819|T/-|frameshift_variant;ENSG00000021776|ENST00000156471|AQR;ENST00000543879.6_1_15:35166876-35196659:-|nuORF	51.19269402634007	0.44601001148513897	2				NaN	NaN	0	NaN	11065	4480	15545
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15548	40.791	NaN	3233.2	30	0	219.8	0.039	+			17262	HYQDVSCLQF	10	69	648.7876884890144	NaN	0	648.7869262695312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_HYQDVSC(Carbamidomethyl (C))LQF_	ENSG00000065268|ENST00000585809|WDR18;WDR18|p.E207Sfs*15|1|0.3|ENSG00000065268|chr19:990869-990869|G/-|frameshift_variant	48.601550744091256	0.31444367966696773	2				NaN	NaN	0	NaN	11066	4480	15545
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15552	40.805	NaN	2168.7	30	0	626.05	0.214				-1	VVKNPLCPL	9	55	347.203369140625	NaN	0	347.203369140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_VVKNPLC(Carbamidomethyl (C))PL_	ENSG00000170043|ENST00000303731|TRAPPC1	19.996771675451527	0.3693019437812985	2				NaN	NaN	0	NaN	11067	4483	15551
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15553	40.808	NaN	4543.2	30	0	382.9	0.106	+			36266	SENNRIFTL	9	74	547.2849961196093	1092.5554393060186	2	547.2847900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SENNRIFTL_	ENSG00000156110|ENST00000539909|ADK;nc|ENSG00000156110|P55263-2|ADK;nc|ENSG00000156110|P55263-4|ADK	45.02220120713402	0.3613509778819777	2				NaN	NaN	0	NaN	11068	4483	15551
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15554	40.81	NaN	2119.6	30	0	353.5	0.034	+			3249	ASLGFLVAK	9	53	453.2763493587987	904.5381457843974	2	453.27679443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASLGFLVAK_	ENSG00000197363|ENST00000359971|ZNF517;ZNF517|p.C121Afs*105|2|0.1|ENSG00000197363|chr8:144807272-144807272|G/-|frameshift_variant	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	11069	4483	15551
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15561	40.919	NaN	5933.6	30	0	926.49	0.214	+			11685	FREDSVVLS	9	65	526.2746523401371	1050.534751747074	2	526.2747802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FREDSVVLS_	ENSG00000106608|ENST00000453200|URGCP;nc|ENSG00000106608|Q8TCY9-2|URGCP;nc|ENSG00000106608|Q8TCY9-3|URGCP;nc|ENSG00000106608|Q8TCY9-4|URGCP;URGCP|p.P521Lfs*8|1|0.22|ENSG00000106608|chr7:43877901-43877901|G/-|frameshift_variant	52.936696900407355	0.27249468807391813	2				NaN	NaN	0	NaN	11073	4486	15560
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15562	40.923	NaN	4092.2	30	0	1773.5	0.106			+	10873	FAVQNPLSN	9	60	495.2575552171077	988.5005575010155	2	495.2574768066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FAVQNPLSN_	REV__ENSG00000100731|ENST00000304743|PCNX1;REV__ENST00000554879.5_1_14:71374480-71476401:+|nuORF;REV__ENST00000556846.1_1_14:71445121-71476448:+|nuORF;REV__nc|ENSG00000100731|Q96RV3-2|PCNX1;REV__nc|ENSG00000100731|Q96RV3-3|PCNX1;REV__nc|ENSG00000100731|Q96RV3-4|PCNX1	40.77816245573522	0.41113185337114944	2				NaN	NaN	0	NaN	11074	4486	15560
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15563	40.925	NaN	5952.6	30	0	840.42	0.106				-1	 	0	50	336.5341033168387	1006.5804805507162	3	336.5341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11075	4486	15560
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15564	40.926	NaN	3038.3	30	0	356.39	0.106			+	-1	ADKKELLI	8	61	486.29218094216134	970.5698089511227	2	486.2921142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))ADKKELLI_	REV__ENSG00000093000|ENST00000347635|NUP50;REV__ENST00000405676.2_1_6:25140296-25141628:+|nuORF;REV__ENST00000469163.1_1_22:45580305-45580533:+|nuORF;REV__ENST00000502634.1_1_5:20304156-20304381:-|nuORF;REV__nc|ENSG00000093000|Q9UKX7-2|NUP50	51.33545320467046	0.5859736979383976	2				NaN	NaN	0	NaN	11076	4486	15560
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15565	40.928	NaN	2222.3	30	0	87.52	0.106				-1	WMRRMRILCWL	11	87	826.9151867607937	NaN	0	826.9154663085938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C),2 Oxidation (M)	_WM(Oxidation (M))RRM(Oxidation (M))RILC(Carbamidomethyl (C))WL_	ENST00000418154.1_1_1:64254543-64254969:-|nuORF	10.265252068803164	0.456735970842152	2				NaN	NaN	0	NaN	11077	4486	15560
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15566	40.93	NaN	1480.9	30	0	124.57	0.035				-1	DMAFCKSF	8	53	511.2103340697382	1020.4061152062765	2	511.2103271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),Oxidation (M)	_DM(Oxidation (M))AFC(Carbamidomethyl (C))KSF_	ENSG00000106397|ENST00000223127|PLOD3;ENST00000460132.5_1_7:100853286-100853899:-|nuORF	31.954861631926434	0.7126016770032289	2				NaN	NaN	0	NaN	11078	4486	15560
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15575	40.951	NaN	3562.4	30	0	1432.2	0.214	+			8452	EARRQLAALG	10	69	542.8163298042437	1083.6181066752872	2	542.8162231445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EARRQLAALG_	ENSG00000116584|ENST00000361247|ARHGEF2;nc|ENSG00000116584|Q92974-2|ARHGEF2;nc|ENSG00000116584|Q92974-3|ARHGEF2	40.05817265558897	0.5486090488315611	2				NaN	NaN	0	NaN	11084	4489	15574
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15576	40.955	NaN	1290.5	30	0	136.12	0.034	+			11903	FTVTSLPPA	9	51	466.7593994140625	NaN	0	466.7593994140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FTVTSLPPA_	nc|ENSG00000124140|Q9H2X9|SLC12A5	37.15910966729921	0.2899585034171616	2				NaN	NaN	0	NaN	11085	4489	15574
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15581	40.97	NaN	2827.8	30	0	305.57	0.144			+	-1	MGLEQIIFK	9	68	547.7977433179032	1093.5809337026062	2	547.7979125976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))GLEQIIFK_	REV__tr|U7T095|U7T095_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00903PE=4SV=1	60.11826168202944	0.21262886028301267	2				NaN	NaN	0	NaN	11087	4492	15580
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15588	40.989	NaN	4377.1	30	0	363.72	0.214			+	36066	SEIVTAVKL	9	64	480.2920413374391	958.5695297416783	2	480.29205322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEIVTAVKL_	REV__ENSG00000054793|ENST00000338821|ATP9A;REV__nc|ENSG00000054793|O75110-2|ATP9A	77.31757898189308	0.1091473830098891	2				NaN	NaN	0	NaN	11091	4495	15587
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15589	40.993	NaN	3713	30	0	829.2	0.106	+			5476	AVAAFVLYK	9	63	491.2920629482644	980.5695729633288	2	491.2912292480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVAAFVLYK_	CCDC107|p.A74V|1|0.5|ENSG00000159884|chr9:35658690-35658690|C/T|missense_variant;ENSG00000159884|ENST00000426546|CCDC107;nc|ENSG00000159884|Q8WV48-2|CCDC107;nc|ENSG00000159884|Q8WV48-3|CCDC107;nc|ENSG00000159884|Q8WV48-4|CCDC107;nc|ENSG00000159884|Q8WV48-5|CCDC107	71.87747018426188	0.13267044672804276	2				NaN	NaN	0	NaN	11092	4495	15587
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15590	40.995	NaN	3101.9	30	0	396.58	0.106				-1	YAFFECKR	8	53	374.1794612712811	1119.5165544140434	3	374.1796569824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_YAFFEC(Carbamidomethyl (C))KR_	ENSG00000183513|ENST00000328709|COA5;ENST00000466848.1_1_2:99217217-99222254:-|nuORF;ENST00000483527.5_1_2:99217217-99224734:-|nuORF	19.359975847455235	0.7988239741663654	2				NaN	NaN	0	NaN	11093	4495	15587
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15591	40.997	NaN	2667.3	30	0	193.4	0.04	+			27339	MIHLRVSLLWP	11	81	682.8975849582341	1363.7806169832681	2	682.896240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MIHLRVSLLWP_	ENST00000542452.1_1_11:73727738-73744892:-|nuORF	25.57405402267927	0.7215402271931856	2				NaN	NaN	0	NaN	11094	4495	15587
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15597	41.013	NaN	5573.8	30	0	474.54	0.214	+			23319	KYQIINEEF	9	66	592.3034086972256	1182.592264461251	2	592.3036499023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KYQIINEEF_	ENSG00000163755|ENST00000296051|HPS3;ENST00000486530.1_1_3:148847510-148871436:+|nuORF;HPS3|p.N332Kfs*31|1|0.34|ENSG00000163755|chr3:149145372-149145373|-/A|frameshift_variant;nc|ENSG00000163755|Q969F9-2|HPS3	104.0567914643314	0.03506238181059741	2				NaN	NaN	0	NaN	11097	4498	15596
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15598	41.017	NaN	3147.7	30	0	465.05	0.106	+			49670	VYISNGQVL	9	55	496.7742309915083	991.5339090498167	2	496.77423095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYISNGQVL_	ENSG00000113811|ENST00000495461|SELENOK;ENST00000487571.1_1_3:53922418-53925815:-|nuORF	82.24051045832904	0.08786059719216216	2				NaN	NaN	0	NaN	11098	4498	15596
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15599	41.019	NaN	6231.4	30	0	1366	0.106			+	-1	CRAPILCDL	9	72	530.7674889210494	1059.5204249088988	2	530.7677612304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_CRAPILC(Carbamidomethyl (C))DL_	REV__ENST00000524227.5_1_8:41525962-41555361:-|nuORF	58.78195531508484	0.22376836668196862	2				NaN	NaN	0	NaN	11099	4498	15596
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15600	41.02	NaN	4557.9	30	0	404.64	0.106	+			27953	MVIPRMVIS	9	66	523.2980269946032	1044.5815010560063	2	523.2982177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MVIPRMVIS_	ENST00000468700.1_1_3:23996165-23996213:+|nuORF	51.33545320467046	0.2872990594074956	2				NaN	NaN	0	NaN	11100	4498	15596
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15601	41.022	NaN	1711.1	30	0	316.51	0.106			+	2254	ALVAGPAS	8	40	343.19761571410726	NaN	0	343.197998046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ALVAGPAS_	REV__ENST00000493734.5_1_22:20748789-20748969:+|nuORF	26.79610172149135	1.7418937515398478	2				NaN	NaN	0	NaN	11101	4498	15596
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15602	41.024	NaN	4082.7	30	0	325.87	0.106	+			29219	NVVKLLGEQY	10	69	581.8273746921565	1161.6401964511128	2	581.8275756835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NVVKLLGEQY_	ENSG00000133884|ENST00000528416|DPF2;ENST00000444314.6_1_11:65101357-65109054:+|nuORF;nc|ENSG00000133884|Q92785-2|DPF2	70.8162118820467	0.27065172005956	2				NaN	NaN	0	NaN	11102	4498	15596
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15603	41.026	NaN	4062	30	0	345.11	0.038	+			9740	ENDLKVNSVVI	11	68	615.3414429266826	1228.668332920165	2	615.340576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ENDLKVNSVVI_	tr|U7SRN2|U7SRN2_FUSNUUPF0371proteinHMPREF1766_01593OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01593PE=3SV=1	59.93077597824379	0.32407304095777845	2				NaN	NaN	0	NaN	11103	4498	15596
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15609	41.042	NaN	20419	30	0	4590.3	0.214				-1	 	0	88	521.2903704267361	1040.5661879202721	2	521.2904663085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11106	4501	15608
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15610	41.046	NaN	2469.7	30	0	413.7	0.106	+			10472	EVPQALRETR	10	59	599.8304026980662	NaN	0	599.8302612304688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EVPQALRETR_	COL9A3|p.P216Lfs*317|1|0.19|ENSG00000092758|chr20:62825828-62825828|C/-|frameshift_variant;COL9A3|p.P243Lfs*290|1|0.43|ENSG00000092758|chr20:62826243-62826243|C/-|frameshift_variant;ENST00000343916.7_1_20:61461923-61467875:+|nuORF	30.317721548370564	0.4006274431774794	2				NaN	NaN	0	NaN	11107	4501	15608
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15611	41.047	NaN	1335.2	30	0	202.8	0.033	+			41872	SVTHSPEI	8	55	435.2225248589478	NaN	0	435.2216491699219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVTHSPEI_	ENSG00000198718|ENST00000361462|TOGARAM1;nc|ENSG00000198718|Q9Y4F4|TOGARAM1	28.2542754592877	1.7418937515398478	2				NaN	NaN	0	NaN	11108	4501	15608
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15615	41.061	NaN	1167.8	30	0	221.51	0.214				-1	SCLCCCCCGSG	11	49	384.77226729523215	NaN	0	384.77203369140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_SCLC(Carbamidomethyl (C))CCCC(Carbamidomethyl (C))GSG_	CD2AP-MDFI|1|fusion;ENSG00000112559|ENST00000230321|MDFI	8.799314080144061	0.456735970842152	2				NaN	NaN	0	NaN	11109	4504	15614
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15616	41.065	NaN	1257.3	30	0	94.332	0.033	+			45365	TVTAVSVLL	9	46	451.78192138671875	NaN	0	451.78192138671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVTAVSVLL_	ENSG00000131650|ENST00000303746|KREMEN2;nc|ENSG00000131650|Q8NCW0-2|KREMEN2;nc|ENSG00000131650|Q8NCW0-5|KREMEN2	31.954861631926434	0.3162336699109506	2				NaN	NaN	0	NaN	11110	4504	15614
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15621	41.08	NaN	3561.3	30	0	273.51	0.214			+	-1	SFFCSQME	8	61	518.1991156318403	1034.3836783304805	2	518.19921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SFFC(Carbamidomethyl (C))SQME_	REV__ENSG00000176219|ENST00000315519|OR11H6;REV__OR11H6|p.S124Hfs*31|1|0.33|ENSG00000176219|chr14:20224073-20224073|T/-|frameshift_variant	45.9519527083369	0.6193794311207887	2				NaN	NaN	0	NaN	11112	4507	15620
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15622	41.083	NaN	2390.6	30	0	340.05	0.106	+			11768	FSKSCHLPW	9	62	368.84774768239015	1103.5214136473705	3	368.8482666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FSKSCHLPW_	ENSG00000174697|ENST00000308868|LEP	25.450171626174864	0.5654022654467333	2				NaN	NaN	0	NaN	11113	4507	15620
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15623	41.085	NaN	2530.3	30	0	283.23	0.036				-1	VNFSKILEM	9	77	548.7894455406389	1095.5643381480777	2	548.7904663085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_VNFSKILEM(Oxidation (M))_	ENST00000199389.10_1_7:6064410-6066384:-|nuORF	32.81241826257853	0.4965981579233955	2				NaN	NaN	0	NaN	11114	4507	15620
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15629	41.101	NaN	2659.7	30	0	390.14	0.214			+	-1	GLAAVMIKY	9	56	491.27595555167426	980.5373581701485	2	491.2757568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_GLAAVM(Oxidation (M))IKY_	REV__ENSG00000105677|ENST00000222284|TMEM147;REV__ENST00000477168.6_1_19:36036641-36037810:+|nuORF;REV__ENST00000595467.1_1_19:36037522-36037810:+|nuORF;REV__nc|ENSG00000105677|Q9BVK8-2|TMEM147	47.91560031466742	0.327412564698279	2				NaN	NaN	0	NaN	11117	4510	15628
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15630	41.105	NaN	3270.7	30	0	239.88	0.106			+	24597	LGQGRSWLLRN	11	75	650.3669724632741	1298.7193919933482	2	650.3667602539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LGQGRSWLLRN_	REV__ENSG00000137941|ENST00000260505|TTLL7;REV__ENST00000480174.5_1_1:84335647-84372167:-|nuORF;REV__ENST00000488014.5_1_1:84352960-84383379:-|nuORF;REV__nc|ENSG00000137941|Q6ZT98-3|TTLL7	75.04331003522576	0.19369523587789836	2				NaN	NaN	0	NaN	11118	4510	15628
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15631	41.107	NaN	3429.3	30	0	340.55	0.106	+			9295	EHQLGLPLY	9	61	535.2875522754822	1068.5605516177643	2	535.7889404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EHQLGLPLY_	CTC1|p.R460H|1|0.39|ENSG00000178971|chr17:8235113-8235113|C/T|missense_variant	32.81241826257853	0.4965981579233955	2				NaN	NaN	0	NaN	11119	4510	15628
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15632	41.109	NaN	2377.2	30	0	437.43	0.106			+	9034	EGELHSKDLE	10	65	578.7764728940356	1155.538392854871	2	579.2763061523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EGELHSKDLE_	REV__ENSG00000196498|ENST00000405201|NCOR2;REV__nc|ENSG00000196498|Q9Y618-2|NCOR2;REV__nc|ENSG00000196498|Q9Y618-4|NCOR2;REV__nc|ENSG00000196498|Q9Y618-5|NCOR2	45.02220120713402	0.5028680121232791	2				NaN	NaN	0	NaN	11120	4510	15628
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15633	41.111	NaN	1864	30	0	174.05	0.035			+	-1	MLAFLYQL	8	61	507.76802714521153	NaN	0	507.7690124511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_M(Oxidation (M))LAFLYQL_	REV__ENSG00000048028|ENST00000696973|USP28;REV__ENST00000540438.5_1_11:113702708-113705045:-|nuORF;REV__nc|ENSG00000048028|Q96RU2-2|USP28;REV__nc|ENSG00000048028|Q96RU2-3|USP28;REV__nc|ENSG00000048028|Q96RU2|USP28;REV__USP28|p.K305Nfs*16|1|0.46|ENSG00000048028|chr11:113829341-113829341|T/-|frameshift_variant;REV__USP28|p.V940Sfs*5|1|0.14|ENSG00000048028|chr11:113803202-113803202|C/-|frameshift_variant	42.47446043378293	1.7418937515398478	2				NaN	NaN	0	NaN	11121	4510	15628
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15637	41.125	NaN	2361.5	30	0	327.85	0.214			+	-1	DLSVMRIDI	9	67	539.2851117995452	1076.5556706658904	2	539.2880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_DLSVM(Oxidation (M))RIDI_	REV__ENSG00000134569|ENST00000378623|LRP4	39.252832667884924	0.4290233611298554	2				NaN	NaN	0	NaN	11122	4513	15636
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15638	41.128	NaN	2944.4	30	0	230.13	0.037	+			49516	VYAALQRQLL	10	65	587.8510717151391	1173.6875904970782	2	588.3519287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYAALQRQLL_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	84.9155231211612	0.16018353804806162	2				NaN	NaN	0	NaN	11123	4513	15636
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15647	41.15	NaN	3506	30	0	512.21	0.214	+			11603	FPSPALQQQ	9	60	508.26383218845217	1014.5131114437044	2	508.26348876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FPSPALQQQ_	ENST00000592414.1_1_19:3053819-3054095:-|nuORF	33.921630207806714	0.48623198279849766	2				NaN	NaN	0	NaN	11129	4516	15646
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15648	41.153	NaN	2976	30	0	295	0.036	+			47215	VMDIPYLNL	9	65	539.2851117995452	1076.5556706658904	2	539.7864379882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VMDIPYLNL_	ENSG00000140694|ENST00000437198|PARN;nc|ENSG00000140694|O95453-2|PARN;nc|ENSG00000140694|O95453-3|PARN;nc|ENSG00000140694|O95453-4|PARN	42.396135135203025	0.392153681582562	2				NaN	NaN	0	NaN	11130	4516	15646
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15654	41.17	NaN	3165.5	30	0	224.91	0.214	+			51319	YSLDHISSL	9	74	517.762081669113	1033.5096104050258	2	517.761962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YSLDHISSL_	ENSG00000030066|ENST00000378460|NUP160;ENST00000527126.1_1_11:47843172-47843701:-|nuORF;nc|ENSG00000030066|Q12769-3|NUP160;nc|ENSG00000030066|Q12769|NUP160	76.7741389293348	0.11149722112137898	2				NaN	NaN	0	NaN	11133	4519	15653
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15655	41.173	NaN	2137.6	30	0	360.67	0.106	+			31743	QPAPVPSMEK	10	58	542.2782145417659	1082.5418761503317	2	542.2782592773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QPAPVPSMEK_	ENSG00000161681|ENST00000293441|SHANK1;nc|ENSG00000161681|Q9Y566-2|SHANK1;nc|ENSG00000161681|Q9Y566-3|SHANK1;SHANK1|p.L2065Sfs*68|1|0.18|ENSG00000161681|chr19:50662259-50662259|C/-|frameshift_variant	36.446750945000026	0.5818864909973037	2				NaN	NaN	0	NaN	11134	4519	15653
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15656	41.175	NaN	2478.5	30	0	329.51	0.039	+			25689	LRHQKTQTVPD	11	69	661.86362707279	1321.71270121238	2	661.8636474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LRHQKTQTVPD_	ENSG00000138835|ENST00000695401|RGS3;nc|ENSG00000138835|P49796-5|RGS3;nc|ENSG00000138835|P49796-6|RGS3;nc|ENSG00000138835|P49796|RGS3;RGS3|p.D307Gfs*40|1|0.45|ENSG00000138835|chr9:113505454-113505455|-/G|frameshift_variant;RGS3|p.D677Gfs*6|1|0.38|ENSG00000138835|chr9:113536903-113536904|-/C|frameshift_variant;RGS3|p.E892Rfs*27|1|0.39|ENSG00000138835|chr9:113584082-113584082|G/-|frameshift_variant;RGS3|p.R851Gfs*5|1|0.42|ENSG00000138835|chr9:113583958-113583958|C/-|frameshift_variant	27.047317107675042	0.7060868989289394	2				NaN	NaN	0	NaN	11135	4519	15653
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15662	41.191	NaN	9834.7	30	0	917.66	0.214	+			15475	GVAFIFNQK	9	66	512.284801230656	1022.5550495281119	2	512.284912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVAFIFNQK_	ENSG00000133816|ENST00000683283|MICAL2;ENSG00000243156|ENST00000441493|MICAL3;ENST00000530691.5_1_11:12229562-12281716:+|nuORF;MICAL2|p.E821Kfs*48|1|0.07|ENSG00000133816|chr11:12242336-12242337|AG/-|frameshift_variant;MICAL3|p.A1313Lfs*17|1|0.24|ENSG00000243156|chr22:17818727-17818727|G/-|frameshift_variant;MICAL3|p.R1499Gfs*106|7|0.44|ENSG00000243156|chr22:17818166-17818166|G/-|frameshift_variant;MICAL3|p.R1706Afs*24|1|0.3|ENSG00000243156|chr22:17817545-17817545|G/-|frameshift_variant;nc|ENSG00000133816|O94851-2|MICAL2;nc|ENSG00000133816|O94851-3|MICAL2;nc|ENSG00000133816|O94851-4|MICAL2;nc|ENSG00000133816|O94851-5|MICAL2;nc|ENSG00000133816|O94851-6|MICAL2;nc|ENSG00000133816|O94851|MICAL2;nc|ENSG00000243156|Q7RTP6-2|MICAL3;nc|ENSG00000243156|Q7RTP6-3|MICAL3;nc|ENSG00000243156|Q7RTP6-4|MICAL3;nc|ENSG00000243156|Q7RTP6-5|MICAL3	119.55681237560556	0.021468056596162587	2				NaN	NaN	0	NaN	11138	4522	15661
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15663	41.195	NaN	3620.7	30	0	458.67	0.106	+			7393	DEDGKKFKI	9	70	540.2899913767975	1078.565429820395	2	540.2904052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DEDGKKFKI_	ENSG00000130811|ENST00000253108|EIF3G;ENST00000587681.5_1_19:10229095-10230535:-|nuORF;ENST00000589009.5_1_19:10227257-10229639:-|nuORF	51.19269402634007	0.2889735674168909	2				NaN	NaN	0	NaN	11139	4522	15661
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15664	41.197	NaN	2586.3	30	0	338.75	0.037			+	10667	EYSFGLIHAL	10	65	575.2992123203942	1148.5838717075883	2	575.2992553710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EYSFGLIHAL_	REV__ENSG00000163873|ENST00000373091|GRIK3;REV__nc|ENSG00000163873|Q13003-2|GRIK3	31.954861631926434	0.6188749698950511	2				NaN	NaN	0	NaN	11140	4522	15661
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15669	41.211	NaN	3034.5	30	0	262.24	0.214	+			35672	SDFKQVLL	8	61	475.271125764496	948.527698595792	2	475.2710876464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SDFKQVLL_	ENSG00000165934|ENST00000298875|CPSF2	53.351449002276354	0.5676011784961348	2				NaN	NaN	0	NaN	11142	4525	15668
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15670	41.215	NaN	2796.4	30	0	362.22	0.037	+			38116	SPVSSLEPPML	11	70	578.8009451320862	NaN	0	578.8002319335938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SPVSSLEPPML_	ENST00000306801.7_1_17:78938830-78939313:+|nuORF	36.446750945000026	0.40298828388271424	2				NaN	NaN	0	NaN	11143	4525	15668
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15674	41.229	NaN	3524.9	30	0	349.37	0.214	+			1870	AILLPQPLK	9	70	496.8289187332127	991.6432845332254	2	496.8289489746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AILLPQPLK_	AluSz_dup37824|chr7:44800399-44800695:-|1.3496941177838604|0.0026438264880892|9.0|476.0|13|2|anti-sense;ENST00000467643.5_1_3:122474254-122512599:-|nuORF;nc|ENSG00000169087|Q96EW2-2|HSPBAP1	63.30626980617807	0.18605348971131092	2				NaN	NaN	0	NaN	11144	4528	15673
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15675	41.233	NaN	4074.1	30	0	416.56	0.036	+			49958	VYYTFWII	8	72	552.7909738118841	1103.567394690568	2	552.7914428710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYYTFWII_	ENST00000366187.2_1_2:39681444-39681540:+|nuORF	35.200714571348534	0.6875396545722289	2				NaN	NaN	0	NaN	11145	4528	15673
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15684	41.254	NaN	6380.9	30	0	896.95	0.214	+			42158	SYSQSSNLF	9	70	516.7352707703417	1031.4559886074833	2	516.735107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SYSQSSNLF_	ENSG00000172466|ENST00000261332|ZNF24;ENST00000589881.5_1_18:32917198-32917747:-|nuORF	134.7655990226056	0.012935733000282069	2				NaN	NaN	0	NaN	11151	4531	15683
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15685	41.258	NaN	3035.4	30	0	262.78	0.106	+			29630	PGEGTWEPEHT	11	71	620.2676180559646	1238.520683178729	2	620.2680053710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PGEGTWEPEHT_	ENSG00000145730|ENST00000438793|PAM;ENST00000505372.1_1_5:102295723-102310166:+|nuORF;nc|ENSG00000145730|P19021-3|PAM;nc|ENSG00000145730|P19021-4|PAM;nc|ENSG00000145730|P19021-5|PAM;nc|ENSG00000145730|P19021-6|PAM;PAM|p.K891Nfs*31|1|0.38|ENSG00000145730|chr5:103025313-103025313|A/-|frameshift_variant	23.52269567125451	0.7430573033454468	2				NaN	NaN	0	NaN	11152	4531	15683
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15686	41.26	NaN	2098	30	0	336.58	0.106				-1	PFCRRQVL	8	60	538.2971105177828	1074.5796681023655	2	538.2994384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_PFC(Carbamidomethyl (C))RRQVL_	OR2B11|p.G174R|1|0.9|ENSG00000177535|chr1:247451463-247451463|C/T|missense_variant	52.29916861842294	0.578018602984656	2				NaN	NaN	0	NaN	11153	4531	15683
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15687	41.262	NaN	1170.1	30	0	168.82	0.034	+			27969	MVLKMVALG	9	48	481.2821969779698	NaN	0	481.2823181152344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MVLKMVALG_	ENSG00000100346|ENST00000402142|CACNA1I;nc|ENSG00000100346|Q9P0X4-2|CACNA1I;nc|ENSG00000100346|Q9P0X4-3|CACNA1I;nc|ENSG00000100346|Q9P0X4-4|CACNA1I	31.954861631926434	0.3162336699109506	2				NaN	NaN	0	NaN	11154	4531	15683
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15692	41.276	NaN	4157.4	30	0	1027.1	0.214				-1	 	0	47	336.5341033168387	1006.5804805507162	3	336.5342102050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11156	4534	15691
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15693	41.28	NaN	2132.5	30	0	217.76	0.036	+			51530	YVYRDETL	8	54	529.7591296204029	1057.5037063076056	2	530.259521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YVYRDETL_	ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;TRRAP|p.K3443Sfs*19|1|0.28|ENSG00000196367|chr7:99004246-99004246|A/-|frameshift_variant	44.116797842482775	0.6307669463330267	2				NaN	NaN	0	NaN	11157	4534	15691
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15697	41.294	NaN	4088.6	30	0	402.58	0.214	+			40952	SVFVETFVQK	10	71	592.3215233904624	1182.6284938477247	2	592.3216552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVFVETFVQK_	ENSG00000170786|ENST00000303749|SDR16C5;nc|ENSG00000170786|Q8N3Y7-2|SDR16C5	131.61620852596164	0.01298938390812184	2				NaN	NaN	0	NaN	11158	4537	15696
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15698	41.298	NaN	1830.5	30	0	119.74	0.034	+			6906	CLVAMVVKL	9	62	488.2892029322724	974.5638529313449	2	488.28900146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_CLVAMVVKL_	ENSG00000119285|ENST00000366582|HEATR1;HEATR1|p.I1897V|1|0.29|ENSG00000119285|chr1:236555616-236555616|T/C|missense_variant	47.91560031466742	0.327412564698279	2				NaN	NaN	0	NaN	11159	4537	15696
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15704	41.314	NaN	1833.8	30	0	237.97	0.141			+	35261	SALLLRDV	8	54	443.77127959320654	885.5280062532131	2	443.771240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SALLLRDV_	REV__ENSG00000137962|ENST00000260526|ARHGAP29	45.9519527083369	0.6193794311207887	2				NaN	NaN	0	NaN	11162	4540	15703
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15710	41.332	NaN	2830.2	30	0	253.87	0.215	+			10988	FEGDIQQFL	9	61	548.7690685533119	NaN	0	548.768798828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FEGDIQQFL_	COL11A1|p.G1096Vfs*102|1|0.07|ENSG00000060718|chr1:102940424-102940424|C/-|frameshift_variant;COL11A1|p.N1709Ifs*76|1|0.32|ENSG00000060718|chr1:102879831-102879831|T/-|frameshift_variant;COL11A1|p.P546Afs*9|1|0.23|ENSG00000060718|chr1:103008510-103008511|-/C|frameshift_variant;COL11A1|p.P546Lfs*87|2|0.28|ENSG00000060718|chr1:103008511-103008511|C/-|frameshift_variant;COL11A1|p.T1554Rfs*33|2|0.13|ENSG00000060718|chr1:102887005-102887005|T/-|frameshift_variant;ENSG00000060718|ENST00000370096|COL11A1;nc|ENSG00000060718|P12107-2|COL11A1;nc|ENSG00000060718|P12107-3|COL11A1;nc|ENSG00000060718|P12107-4|COL11A1	49.44154591367651	0.21054156626303966	2				NaN	NaN	0	NaN	11165	4543	15709
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15711	41.335	NaN	2960.6	30	0	231.5	0.106	+			27340	MIHLRVSLLWP	11	73	682.8975849582341	1363.7806169832681	2	683.3985595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MIHLRVSLLWP_	ENST00000542452.1_1_11:73727738-73744892:-|nuORF	19.996771675451527	0.7768568223548057	2				NaN	NaN	0	NaN	11166	4543	15709
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15712	41.337	NaN	2385.9	30	0	220.31	0.106			+	27955	MVISRAEKE	9	63	531.7826075927168	1061.5506622522335	2	531.7823486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MVISRAEKE_	REV__ENSG00000198586|ENST00000431350|TLK1;REV__nc|ENSG00000198586|Q9UKI8-2|TLK1;REV__nc|ENSG00000198586|Q9UKI8-3|TLK1;REV__nc|ENSG00000198586|Q9UKI8-4|TLK1;REV__nc|ENSG00000198586|Q9UKI8-5|TLK1	62.107414245175825	0.1960472003779324	2				NaN	NaN	0	NaN	11167	4543	15709
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15713	41.339	NaN	1918.7	30	0	161.71	0.106	+			18118	ILDQNRIF	8	60	509.7879855001918	1017.5614180671836	2	509.7878723144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ILDQNRIF_	ENSG00000134202|ENST00000361066|GSTM3;ENST00000476321.5_1_1:110279982-110280760:-|nuORF;ENST00000488824.1_1_1:110279695-110282569:-|nuORF	51.33545320467046	0.5859736979383976	2				NaN	NaN	0	NaN	11168	4543	15709
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15714	41.341	NaN	893.39	30	0	46.311	0.038			+	30177	PSHISPTA	8	40	405.21126018807075	NaN	0	404.8766784667969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PSHISPTA_	REV__ENST00000381401.10_1_X:1510901-1511015:-|nuORF	25.450171626174864	1.7418937515398478	2				NaN	NaN	0	NaN	11169	4543	15709
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15720	41.357	NaN	1249.5	30	0	84.626	0.143				-1	 	0	55	499.27481993702236	498.26754347042237	1	499.2740478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11172	4546	15719
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15726	41.375	NaN	2204.1	30	0	230.16	0.214	+			7314	DASLKTYLY	9	60	537.2794639266741	1072.5443749201481	2	537.279541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DASLKTYLY_	ENSG00000186952|ENST00000455884|TMEM232;ENST00000515518.6_1_5:109760554-109978041:-|nuORF;nc|ENSG00000186952|C9JQI7-2|TMEM232;TMEM232|p.N394Ifs*13|3|0.32|ENSG00000186952|chr5:110605204-110605204|T/-|frameshift_variant	71.87747018426188	0.13267044672804276	2				NaN	NaN	0	NaN	11175	4549	15725
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15727	41.378	NaN	2236.6	30	0	126.05	0.044			+	50381	WYRPWIWMKMR	11	85	826.9173908604627	1651.8202287877252	2	827.41455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WYRPWIWMKMR_	REV__ENST00000446197.7_1_14:24584891-24586136:+|nuORF;REV__ENST00000559382.5_2_14:24584130-24586206:+|nuORF;REV__ENST00000560901.5_1_14:24584114-24586206:+|nuORF	9.705651100619752	0.8250432705525658	2				NaN	NaN	0	NaN	11176	4549	15725
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15732	41.393	NaN	2942.9	30	0	1066.1	0.213			+	28658	NLLRCPSARAP	11	53	599.3295265170742	1196.6445001009483	2	599.3294067382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NLLRCPSARAP_	REV__ENST00000379834.6_1_6:7389749-7389923:+|nuORF	29.170058357718403	0.683821074385409	2				NaN	NaN	0	NaN	11178	4552	15731
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15733	41.397	NaN	2090	30	0	165.97	0.106	+			13429	GLGSVLAGLL	10	57	450.2820098834378	898.5494668336756	2	450.28155517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GLGSVLAGLL_	ENSG00000213901|ENST00000409878|SLC23A3;ENST00000497918.5_1_2:220029863-220033027:-|nuORF;nc|ENSG00000213901|Q6PIS1-5|SLC23A3	57.81127852772723	0.38574637483653407	2				NaN	NaN	0	NaN	11179	4552	15731
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15734	41.399	NaN	1445.2	30	0	120.39	0.106	+			45805	VAIGDVYFK	9	50	506.27915420061555	NaN	0	506.2793273925781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VAIGDVYFK_	ENSG00000089775|ENST00000608382|ZBTB25;ENSG00000181472|ENST00000325144|ZBTB2;ZBTB2|p.F476Lfs*3|1|0.24|ENSG00000181472|chr6:151365638-151365638|A/-|frameshift_variant;ZBTB25|p.E245Gfs*4|1|0.2|ENSG00000089775|chr14:64487497-64487498|-/C|frameshift_variant	39.252832667884924	0.27938773122138094	2				NaN	NaN	0	NaN	11180	4552	15731
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15735	41.4	NaN	1871.2	30	0	168.57	0.037			+	48940	VVEKGATYYL	10	61	571.8070678710938	NaN	0	571.8070678710938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVEKGATYYL_	REV__EML6|p.N1675Mfs*7|2|0.32|ENSG00000214595|chr2:54962572-54962572|A/-|frameshift_variant;REV__EML6|p.R1767Efs*19|1|0.37|ENSG00000214595|chr2:54964127-54964127|C/-|frameshift_variant;REV__ENSG00000214595|ENST00000356458|EML6;REV__nc|ENSG00000214595|Q6ZMW3-2|EML6	34.172542307311794	0.38797011891751465	2				NaN	NaN	0	NaN	11181	4552	15731
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15740	41.415	NaN	2694.7	30	0	268.74	0.214			+	11060	FEQVDISEL	9	65	540.2683715820312	NaN	0	540.2683715820312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FEQVDISEL_	REV__CDH18|p.T706N|1|0.04|ENSG00000145526|chr5:19473482-19473482|G/T|missense_variant;REV__ENSG00000145526|ENST00000382275|CDH18	45.97224482568171	0.23445038899310136	2				NaN	NaN	0	NaN	11183	4555	15739
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15741	41.418	NaN	4692.2	30	0	583.02	0.106			+	8014	DTMIVVDAAEI	11	58	588.7944452139553	1175.5743374947106	2	588.7960205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DTMIVVDAAEI_	REV__tr|U7T5A6|U7T5A6_FUSNUCadmium-translocatingP-typeATPaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00154PE=3SV=1	31.529811441608018	0.6590691889962369	2				NaN	NaN	0	NaN	11184	4555	15739
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15742	41.42	NaN	1103.9	30	0	180.72	0.034	+			21500	KNLKSVEI	8	42	465.78426923752704	929.5539855418541	2	465.7843017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KNLKSVEI_	ENSG00000172469|ENST00000358812|MANEA	26.69291269510374	0.7532304684939817	2				NaN	NaN	0	NaN	11185	4555	15739
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15748	41.436	NaN	3340.3	30	0	283.43	0.214	+			50043	WEISQKTVL	9	64	552.308358424055	1102.6021639149099	2	552.3090209960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WEISQKTVL_	ENSG00000167325|ENST00000300738|RRM1	45.02220120713402	0.3613509778819777	2				NaN	NaN	0	NaN	11188	4558	15747
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15749	41.44	NaN	2677.5	30	0	623.88	0.037	+			2214	ALQSHLCYW	9	49	374.1794612712811	1119.5165544140434	3	374.1797790527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ALQSHLCYW_	ENSG00000085788|ENST00000397166|DDHD2;ENSG00000107651|ENST00000369075|SEC23IP;nc|ENSG00000085788|O94830-2|DDHD2	20.481830146152948	0.6112419832031293	2				NaN	NaN	0	NaN	11189	4558	15747
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15753	41.454	NaN	2713.2	30	0	295.98	0.144	+			42277	TADHNLLLY	9	70	530.27732886085	1058.5401047885	2	530.27734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TADHNLLLY_	ENSG00000183751|ENST00000568546|TBL3	27.882242232435846	0.5426732730940306	2				NaN	NaN	0	NaN	11190	4561	15752
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15757	41.47	NaN	2469.4	30	0	200.75	0.213	+			42112	SYLEKQVVTF	10	63	607.3277513001431	1212.640949667086	2	607.3284912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SYLEKQVVTF_	ENSG00000018699|ENST00000317907|TTC27	45.02220120713402	0.5028680121232791	2				NaN	NaN	0	NaN	11191	4564	15756
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15758	41.474	NaN	2136.5	30	0	257.97	0.106			+	50584	YDAEETRIM	9	63	564.2535419611869	1126.4925309891737	2	564.253173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YDAEETRIM_	REV__ADAMTS16|p.G799Wfs*25|1|0.22|ENSG00000145536|chr5:5239795-5239796|-/T|frameshift_variant;REV__ENSG00000145536|ENST00000274181|ADAMTS16;REV__nc|ENSG00000145536|Q8TE57-2|ADAMTS16	44.116797842482775	0.37197099687881774	2				NaN	NaN	0	NaN	11192	4564	15756
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15759	41.476	NaN	1753.4	30	0	115.59	0.032				-1	CCCCSCSCL	9	44	384.77226729523215	NaN	0	384.7730407714844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	4 Carbamidomethyl (C)	_C(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))CSC(Carbamidomethyl (C))SCL_	ENSG00000091844|ENST00000206262|RGS17;ENSG00000147509|ENST00000297313|RGS20;nc|ENSG00000147509|O76081-2|RGS20;nc|ENSG00000147509|O76081-5|RGS20;nc|ENSG00000147509|O76081-6|RGS20	9.705651100619752	0.40413237678333463	2				NaN	NaN	0	NaN	11193	4564	15756
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15767	41.495	NaN	6483.3	30	0	3142	0.214				-1	 	0	70	347.20358660912603	346.19631014252604	1	347.20330810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11198	4567	15766
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15768	41.499	NaN	4047.5	30	0	854.48	0.106	+			13189	GIALAYGSLLL	11	52	364.22150137147656	1089.6426747146297	3	364.2218017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GIALAYGSLLL_	ENSG00000101294|ENST00000398174|HM13;nc|ENSG00000101294|Q8TCT9-4|HM13;nc|ENSG00000101294|Q8TCT9-5|HM13;nc|ENSG00000101294|Q8TCT9|HM13	38.80614096846853	0.5742786857833295	2				NaN	NaN	0	NaN	11199	4567	15766
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15769	41.501	NaN	3598.5	30	0	246.79	0.106	+			33608	RLRKIYHS	8	70	536.8228133458688	1071.6310737585375	2	536.8229370117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RLRKIYHS_	ENSG00000185739|ENST00000399609|SRL;nc|ENSG00000185739|Q86TD4-1|SRL;nc|ENSG00000185739|Q86TD4-3|SRL	40.5726180659479	0.6527593143185008	2				NaN	NaN	0	NaN	11200	4567	15766
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15770	41.503	NaN	5294.2	30	0	586.45	0.106				-1	WWYSMEVAI	9	68	600.7740060133999	1199.5334590935997	2	600.774169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_WWYSM(Oxidation (M))EVAI_	ENST00000544118.5_1_11:61118583-61124082:-|nuORF	31.954861631926434	0.5046124803899898	2				NaN	NaN	0	NaN	11201	4567	15766
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15771	41.504	NaN	2631.8	30	0	353.3	0.106			+	-1	LFTVYCYL	8	65	539.7658725817696	NaN	0	539.7659912109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_LFTVYC(Carbamidomethyl (C))YL_	REV__ENST00000501122.2_1_11:65194003-65194111:+|nuORF	35.200714571348534	1.7418937515398478	2				NaN	NaN	0	NaN	11202	4567	15766
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15772	41.506	NaN	1001	30	0	230.72	0.106			+	4834	ATPGTLVKV	9	39	443.27410888671875	NaN	0	443.27410888671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATPGTLVKV_	REV__tr|U7T6U8|U7T6U8_FUSNUConjugaltransferproteinTrbCOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00015PE=4SV=1	40.77816245573522	0.2702456086868081	2				NaN	NaN	0	NaN	11203	4567	15766
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15773	41.508	NaN	1902.5	30	0	218.14	0.036				-1	YLAVSLCGLL	10	68	554.8059692382812	NaN	0	554.8059692382812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_YLAVSLC(Carbamidomethyl (C))GLL_	ENST00000532146.1_1_11:47504033-47505052:-|nuORF	44.116797842482775	0.3427969396372342	2				NaN	NaN	0	NaN	11204	4567	15766
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15777	41.522	NaN	6173.6	30	0	661.16	0.214	+			12701	GEKNVFEAL	9	72	503.76385759231147	1005.513162251423	2	503.7634582519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEKNVFEAL_	CYP51A1|p.L333Wfs*13|1|0.15|ENSG00000001630|chr7:92123208-92123208|A/-|frameshift_variant;ENSG00000001630|ENST00000003100|CYP51A1;nc|ENSG00000001630|Q16850-2|CYP51A1	70.8162118820467	0.13725933411854815	2				NaN	NaN	0	NaN	11205	4570	15776
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15778	41.526	NaN	6487.4	30	0	517.78	0.036	+			28394	NENSLFKSL	9	71	526.2746360172322	1050.5347191012643	2	526.2742919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NENSLFKSL_	CLTC|p.A1374*|1|0.05|ENSG00000141367|chr17:59683464-59683465|-/TA|frameshift_variant;ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000141367|Q00610-2|CLTC	106.88024417677582	0.032181361622142884	2				NaN	NaN	0	NaN	11206	4570	15776
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15784	41.542	NaN	3952.5	30	0	534.97	0.214			+	7899	DRVSLLSLV	9	59	501.30163439800623	1000.5887158628125	2	501.3030700683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DRVSLLSLV_	REV__ENSG00000175575|ENST00000310571|PAAF1;REV__nc|ENSG00000175575|Q9BRP4-2|PAAF1;REV__nc|ENSG00000175575|Q9BRP4-3|PAAF1	52.936696900407355	0.27249468807391813	2				NaN	NaN	0	NaN	11209	4573	15783
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15785	41.545	NaN	3621.9	30	0	317.13	0.106	+			15476	GVAFIFNQK	9	67	512.284801230656	1022.5550495281119	2	512.786376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GVAFIFNQK_	ENSG00000133816|ENST00000683283|MICAL2;ENSG00000243156|ENST00000441493|MICAL3;ENST00000530691.5_1_11:12229562-12281716:+|nuORF;MICAL2|p.E821Kfs*48|1|0.07|ENSG00000133816|chr11:12242336-12242337|AG/-|frameshift_variant;MICAL3|p.A1313Lfs*17|1|0.24|ENSG00000243156|chr22:17818727-17818727|G/-|frameshift_variant;MICAL3|p.R1499Gfs*106|7|0.44|ENSG00000243156|chr22:17818166-17818166|G/-|frameshift_variant;MICAL3|p.R1706Afs*24|1|0.3|ENSG00000243156|chr22:17817545-17817545|G/-|frameshift_variant;nc|ENSG00000133816|O94851-2|MICAL2;nc|ENSG00000133816|O94851-3|MICAL2;nc|ENSG00000133816|O94851-4|MICAL2;nc|ENSG00000133816|O94851-5|MICAL2;nc|ENSG00000133816|O94851-6|MICAL2;nc|ENSG00000133816|O94851|MICAL2;nc|ENSG00000243156|Q7RTP6-2|MICAL3;nc|ENSG00000243156|Q7RTP6-3|MICAL3;nc|ENSG00000243156|Q7RTP6-4|MICAL3;nc|ENSG00000243156|Q7RTP6-5|MICAL3	65.80317337860623	0.1652391959156183	2				NaN	NaN	0	NaN	11210	4573	15783
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15786	41.547	NaN	1467.6	30	0	272.36	0.106	+			6974	CPTHGAWA	8	44	421.68486055933727	841.3551681854746	2	421.6846618652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_CPTHGAWA_	CFP|p.C439Wfs*5|1|0.05|ENSG00000126759|chrX:47624368-47624369|-/ATAAACTAGC|frameshift_variant;ENSG00000126759|ENST00000396992|CFP;ENST00000485991.5_1_X:47485455-47487711:-|nuORF	39.021493756699265	0.6623843612266921	2				NaN	NaN	0	NaN	11211	4573	15783
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15787	41.549	NaN	1339.4	30	0	116.19	0.035			+	18524	ISLAQNINI	9	55	493.287870805628	984.561188678056	2	493.7890930175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ISLAQNINI_	REV__ENSG00000184445|ENST00000333479|KNTC1;REV__KNTC1|p.K1646Nfs*2|2|0.35|ENSG00000184445|chr12:122603073-122603073|A/-|frameshift_variant;REV__KNTC1|p.K1646Tfs*12|1|0.13|ENSG00000184445|chr12:122603073-122603074|AA/-|frameshift_variant;REV__KNTC1|p.L1647Tfs*12|1|0.3|ENSG00000184445|chr12:122603072-122603073|-/A|frameshift_variant	54.776311868738084	0.25715957988447635	2				NaN	NaN	0	NaN	11212	4573	15783
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15793	41.565	NaN	3177.6	30	0	829.01	0.142			+	26552	LTSHSDSN	8	54	430.689703394443	NaN	0	430.6896667480469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LTSHSDSN_	REV__ENST00000434391.6_1_1:26796443-26796557:+|nuORF	31.529811441608018	1.7418937515398478	2				NaN	NaN	0	NaN	11215	4576	15792
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15798	41.582	NaN	2249.4	30	0	324.06	0.214	+			28377	NELILKTL	8	57	472.2948111131811	942.5750692931622	2	472.29412841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NELILKTL_	ENSG00000143179|ENST00000367879|UCK2	65.46538089061403	0.44767499471257033	2				NaN	NaN	0	NaN	11217	4579	15797
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15799	41.585	NaN	1950.6	30	0	207.56	0.106	+			41278	SVLLADQL	8	53	429.75020094475553	857.4858489563111	2	429.74969482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVLLADQL_	ENSG00000117148|ENST00000375406|ACTL8	79.45101966838831	0.3281480470254892	2				NaN	NaN	0	NaN	11218	4579	15797
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15800	41.587	NaN	624.97	30	0	138.61	0.106				-1	 	0	24	209.13844565073458	NaN	0	209.13848876953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11219	4579	15797
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15801	41.589	NaN	2217.8	30	0	179.55	0.106	+			49650	VYINEVRVI	9	70	552.8245438421509	NaN	0	552.823974609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VYINEVRVI_	ENSG00000164944|ENST00000297591|VIRMA;nc|ENSG00000164944|Q69YN4-2|VIRMA;nc|ENSG00000164944|Q69YN4-3|VIRMA;nc|ENSG00000164944|Q69YN4-4|VIRMA	93.1432384553994	0.0352600271724948	2				NaN	NaN	0	NaN	11220	4579	15797
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15802	41.591	NaN	1004	30	0	174.01	0.037	+			29748	PHRNVRKTK	9	35	379.2329100114657	NaN	0	379.2328186035156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PHRNVRKTK_	ENSG00000159788|ENST00000336727|RGS12;ENST00000502947.1_1_4:3317897-3344786:+|nuORF;nc|ENSG00000159788|O14924-4|RGS12;nc|ENSG00000159788|O14924-5|RGS12;RGS12|p.K1178Nfs*32|1|0.71|ENSG00000159788|chr4:3428672-3428672|A/-|frameshift_variant;RGS12|p.K869Sfs*2|1|0.44|ENSG00000159788|chr4:3417086-3417086|A/-|frameshift_variant;RGS12|p.N1124Hfs*23|1|0.3|ENSG00000159788|chr4:3428126-3428127|AG/-|frameshift_variant;RGS12|p.Q1292Rfs*49|1|0.23|ENSG00000159788|chr4:3430704-3430704|C/-|frameshift_variant;RGS12|p.Q1363Rfs*30|1|0.3|ENSG00000159788|chr4:3430923-3430923|C/-|frameshift_variant	15.641811463095205	0.38404136392510424	2				NaN	NaN	0	NaN	11221	4579	15797
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15807	41.605	NaN	3761.7	30	0	1317.7	0.214	+			7741	DMKQFKNL	8	63	512.2680588064818	1022.5215646797636	2	512.2679443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DMKQFKNL_	CENPN|p.S107L|1|0.35|ENSG00000166451|chr16:81017800-81017800|C/T|missense_variant	49.44154591367651	0.597725784090933	2				NaN	NaN	0	NaN	11223	4582	15806
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15808	41.609	NaN	2352.6	30	0	425.58	0.106			+	41414	SVNALFSL	8	68	425.73728181049387	849.4600106877878	2	425.7370910644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVNALFSL_	REV__ENSG00000180773|ENST00000326402|SLC36A4;REV__nc|ENSG00000180773|Q6YBV0-2|SLC36A4;REV__SLC36A4|p.N453Ifs*4|1|0.19|ENSG00000180773|chr11:93148694-93148694|T/-|frameshift_variant	47.657333605630114	0.6087971902037268	2				NaN	NaN	0	NaN	11224	4582	15806
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15809	41.611	NaN	2018.1	30	0	305.73	0.035				-1	 	0	59	520.3329469263701	519.3256704597701	1	521.336181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11225	4582	15806
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15813	41.625	NaN	5047.3	30	0	1123.3	0.214				-1	 	0	51	336.5341033168387	1006.5804805507162	3	336.5342102050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11226	4585	15812
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15814	41.628	NaN	2558.7	30	0	286.67	0.106	+			41249	SVLGQLGITK	10	55	508.31101922989313	1014.6074855265863	2	508.3111267089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVLGQLGITK_	ENSG00000197249|ENST00000393087|SERPINA1;ENST00000489769.1_1_14:94844788-94846995:-|nuORF;nc|ENSG00000197249|P01009-2|SERPINA1;SERPINA1|p.L377*|1|0.19|ENSG00000197249|chr14:94378576-94378576|A/-|frameshift_variant;SERPINA1|p.T369Rfs*3|1|0.05|ENSG00000197249|chr14:94378605-94378606|-/CCCC|frameshift_variant	72.28901530423826	0.2586190430189177	2				NaN	NaN	0	NaN	11227	4585	15812
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15815	41.63	NaN	3285.1	30	0	259.45	0.036	+			29254	NYAQVFNKL	9	68	548.7929358910973	1095.5713188489945	2	548.7931518554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NYAQVFNKL_	ENSG00000136261|ENST00000258761|BZW2;ENST00000480517.5_1_7:16705068-16725727:+|nuORF;nc|ENSG00000136261|Q9Y6E2-2|BZW2	74.25504064058377	0.12238981753128622	2				NaN	NaN	0	NaN	11228	4585	15812
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15819	41.644	NaN	2626.3	30	0	967.87	0.214			+	9819	EPGPARDG	8	45	399.6915492208894	797.3685455085788	2	399.6914367675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EPGPARDG_	REV__AATK|p.F1101Sfs*3|1|0.46|ENSG00000181409|chr17:81120634-81120634|A/-|frameshift_variant;REV__AATK|p.L1059Tfs*5|1|0.32|ENSG00000181409|chr17:81120762-81120763|-/G|frameshift_variant;REV__ENSG00000181409|ENST00000326724|AATK;REV__ENST00000570932.5_1_17:79094187-79095082:-|nuORF	25.450171626174864	0.7628259754767981	2				NaN	NaN	0	NaN	11229	4588	15818
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15820	41.648	NaN	2634.1	30	0	363.68	0.036				-1	CPAGCRVILC	10	64	546.2616361794422	NaN	0	546.2614135742188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_CPAGC(Carbamidomethyl (C))RVILC_	nc|ENSG00000206120|Q0D2K5|EGFEM1P	47.91560031466742	0.31878035802558913	2				NaN	NaN	0	NaN	11230	4588	15818
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15825	41.663	NaN	3718.8	30	0	363.7	0.214	+			27607	MPNKTELLK	9	70	537.3050565231871	1072.595560113174	2	537.3050537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MPNKTELLK_	ENSG00000177853|ENST00000316045|ZNF518A;nc|ENSG00000177853|Q6AHZ1-2|ZNF518A;ZNF518A|p.I1254Nfs*11|1|0.18|ENSG00000177853|chr10:96160075-96160076|-/A|frameshift_variant	60.97194046774394	0.20551255781574032	2				NaN	NaN	0	NaN	11232	4591	15824
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15826	41.666	NaN	3442.9	30	0	774.22	0.037			+	-1	SMMQLLHGR	9	62	368.84774768239015	1103.5214136473705	3	368.8479919433594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Oxidation (M)	_SM(Oxidation (M))M(Oxidation (M))QLLHGR_	REV__ENST00000311481.10_1_11:66043718-66043805:+|nuORF	25.57405402267927	0.5642445186134241	2				NaN	NaN	0	NaN	11233	4591	15824
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15832	41.683	NaN	2880.4	30	0	246.62	0.211	+			27341	MIHLRVSLLWP	11	68	682.8975849582341	1363.7806169832681	2	682.8961181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MIHLRVSLLWP_	ENST00000542452.1_1_11:73727738-73744892:-|nuORF	35.15202426646627	0.6210751305041943	2				NaN	NaN	0	NaN	11236	4594	15831
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15833	41.686	NaN	2558.6	30	0	339.04	0.106			+	206	AALLIPVVK	9	48	462.31827292197977	922.6219929107596	2	462.3177490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AALLIPVVK_	REV__ENSG00000185518|ENST00000394232|SV2B;REV__nc|ENSG00000185518|Q7L1I2-2|SV2B	38.80614096846853	0.43426287593479557	2				NaN	NaN	0	NaN	11237	4594	15831
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15834	41.688	NaN	3600.9	30	0	290.13	0.038	+			21523	KNRLQTAPVPM	11	75	627.8560000012238	NaN	0	627.8556518554688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KNRLQTAPVPM_	MAPT|p.S633N|1|0.18|ENSG00000186868|chr17:46014274-46014274|G/A|missense_variant	53.08895987439943	0.2931326677786871	2				NaN	NaN	0	NaN	11238	4594	15831
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15838	41.702	NaN	2141.8	30	0	162.25	0.214	+			28646	NLGVVKSAV	9	56	443.77138666672903	885.5282204002581	2	443.7713928222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NLGVVKSAV_	ENSG00000206043|ENST00000579455|C18orf63	40.77816245573522	0.41113185337114944	2				NaN	NaN	0	NaN	11239	4597	15837
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15839	41.706	NaN	2371.9	30	0	250.38	0.106			+	47114	VLMRFLAQ	8	57	489.2834498000965	976.552346666993	2	489.28643798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VLMRFLAQ_	REV__ENST00000522994.1_1_5:169412837-169427133:+|nuORF	38.80614096846853	0.6637206697844082	2				NaN	NaN	0	NaN	11240	4597	15837
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15840	41.708	NaN	2176.3	30	0	176.91	0.036	+			44351	TSGVTFRSPL	10	60	532.7908817356295	1063.5672105380588	2	532.7916870117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TSGVTFRSPL_	ENSG00000139405|ENST00000548278|RITA1;nc|ENSG00000139405|Q96K30-3|RITA1	41.42661286455405	0.5359995577334734	2				NaN	NaN	0	NaN	11241	4597	15837
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15846	41.724	NaN	2193.3	30	0	242.2	0.142				-1	 	0	60	475.2651692955173	474.2578928289173	1	475.264404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11244	4600	15845
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15851	41.74	NaN	2161.6	30	0	274.67	0.214				-1	 	0	46	486.29165158788663	485.28437512128664	1	486.2972106933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11246	4603	15850
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15852	41.744	NaN	2401.3	30	0	579.67	0.106			+	11706	FRVFRVGPGY	10	63	599.3295265170742	1196.6445001009483	2	599.3296508789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FRVFRVGPGY_	REV__ENSG00000116661|ENST00000354287|FBXO2	29.14955571784316	0.6417842315402807	2				NaN	NaN	0	NaN	11247	4603	15850
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15853	41.746	NaN	1999.9	30	0	233.84	0.036				-1	IYVGQDCKM	9	67	557.2591341495449	NaN	0	557.2582397460938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_IYVGQDC(Carbamidomethyl (C))KM_	ENST00000343411.7_1_16:84135493-84135559:-|nuORF	49.44154591367651	0.21054156626303966	2				NaN	NaN	0	NaN	11248	4603	15850
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15857	41.76	NaN	4174.6	30	0	628.49	0.214			+	12489	GEEEATVMVIV	11	68	588.7944452139553	1175.5743374947106	2	588.7943725585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEEEATVMVIV_	REV__PTPN14|p.A1006V|1|0.39|ENSG00000152104|chr1:214372730-214372730|G/A|missense_variant	26.69291269510374	0.70980431218767	2				NaN	NaN	0	NaN	11249	4606	15856
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15858	41.763	NaN	3719.1	30	0	412.2	0.106	+			23294	KYNANFVTF	9	64	552.2800016046803	1102.5454502761604	2	552.2798461914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KYNANFVTF_	ENSG00000173120|ENST00000529006|KDM2A;ENST00000527157.1_1_11:66888787-66947744:+|nuORF;KDM2A|p.G855Efs*24|2|0.34|ENSG00000173120|chr11:67250589-67250589|G/-|frameshift_variant;KDM2A|p.L300Cfs*10|1|0.4|ENSG00000173120|chr11:67219340-67219340|T/-|frameshift_variant;KDM2A|p.R834Vfs*3|1|0.38|ENSG00000173120|chr11:67250525-67250525|C/-|frameshift_variant;nc|ENSG00000173120|Q9Y2K7-3|KDM2A	96.19043198914106	0.047412499214244314	2				NaN	NaN	0	NaN	11250	4606	15856
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15859	41.765	NaN	2665.4	30	0	518.88	0.106	+			5049	ATSGSWGGVM	10	54	476.7137888039249	951.4130246746498	2	476.7133483886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATSGSWGGVM_	ENST00000441006.5_1_22:17517965-17528257:+|nuORF	27.882242232435846	0.6521336255503853	2				NaN	NaN	0	NaN	11251	4606	15856
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15860	41.767	NaN	1939.7	30	0	339.66	0.106			+	41670	SVRTLSIGI	9	61	494.2947367011634	986.5749204691268	2	494.2956237792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SVRTLSIGI_	REV__ENSG00000100344|ENST00000216180|PNPLA3;REV__ENST00000406117.6_1_22:44322822-44359208:+|nuORF;REV__nc|ENSG00000100344|Q9NST1-2|PNPLA3;REV__PNPLA3|p.G112S|1|0.74|ENSG00000100344|chr22:43927081-43927081|G/A|missense_variant;REV__PNPLA3|p.P229Rfs*34|1|0.16|ENSG00000100344|chr22:43933072-43933072|C/-|frameshift_variant	42.86426827375447	0.38666266728046506	2				NaN	NaN	0	NaN	11252	4606	15856
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15861	41.769	NaN	3385.1	30	0	304.88	0.037			+	8803	EEKNLEKEI	9	63	566.2987717901755	1130.5829906471508	2	566.799560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EEKNLEKEI_	REV__ENSG00000061987|ENST00000393630|MON2;REV__ENST00000547095.5_1_12:62864501-62986526:+|nuORF;REV__MON2|p.A1027Vfs*94|1|0.03|ENSG00000061987|chr12:62553043-62553044|-/TTCTTTTT|frameshift_variant;REV__MON2|p.T1274Qfs*3|1|0.36|ENSG00000061987|chr12:62560894-62560894|T/-|frameshift_variant;REV__MON2|p.V1435Afs*17|1|0.03|ENSG00000061987|chr12:62566430-62566431|-/CATCT|frameshift_variant;REV__nc|ENSG00000061987|Q7Z3U7-2|MON2;REV__nc|ENSG00000061987|Q7Z3U7-5|MON2;REV__nc|ENSG00000061987|Q7Z3U7-6|MON2	54.722347961057174	0.257609425301511	2				NaN	NaN	0	NaN	11253	4606	15856
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15870	41.789	NaN	2765.6	30	0	345.32	0.143	+			49649	VYILLPGDR	9	57	523.3060774512455	1044.597601969291	2	523.3057250976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYILLPGDR_	ENST00000426529.6_1_7:30590332-30591084:-|nuORF	45.9519527083369	0.35044536499095585	2				NaN	NaN	0	NaN	11259	4609	15869
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15874	41.805	NaN	3054.7	30	0	413.5	0.214			+	50760	YEKKEQSF	8	65	529.7610659777307	1057.5075790222613	2	529.7617797851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YEKKEQSF_	REV__tr|U7STM7|U7STM7_FUSNUSecretedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01118PE=4SV=1	65.80317337860623	0.44433089765398776	2				NaN	NaN	0	NaN	11260	4612	15873
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15875	41.809	NaN	1738.4	30	0	815.88	0.034				-1	 	0	46	486.29165158788663	485.28437512128664	1	486.2904968261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11261	4612	15873
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15879	41.823	NaN	2730.5	30	0	615.24	0.214			+	17813	IEVRRPHA	8	57	489.2834498000965	976.552346666993	2	489.28125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IEVRRPHA_	REV__ENSG00000092470|ENST00000263795|WDR76	25.450171626174864	0.7628259754767981	2				NaN	NaN	0	NaN	11262	4615	15878
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15880	41.826	NaN	856.82	30	0	203.17	0.033			+	21351	KLYYFYKCK	9	39	419.22403047911524	NaN	0	419.22369384765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KLYYFYKCK_	REV__ENST00000589761.1_1_17:58378837-58469252:-|nuORF	31.954861631926434	0.3162336699109506	2				NaN	NaN	0	NaN	11263	4615	15878
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15884	41.84	NaN	1489	30	0	251.21	0.214	+			51074	YLPAGQSVL	9	53	474.26336406311464	946.5121751930293	2	474.2633056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YLPAGQSVL_	ENSG00000167085|ENST00000300408|PHB1;nc|ENSG00000167085|P35232-2|PHB1	29.14955571784316	0.5308295550522326	2				NaN	NaN	0	NaN	11264	4618	15883
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15885	41.844	NaN	2655.9	30	0	575.21	0.106	+			18123	ILEVFSCGR	9	66	512.2680588064818	1022.5215646797636	2	512.7696533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ILEVFSCGR_	ENST00000553612.5_1_14:81686964-81687150:-|nuORF	49.44154591367651	0.3095138337212152	2				NaN	NaN	0	NaN	11265	4618	15883
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15886	41.846	NaN	1751.5	30	0	205.19	0.106			+	-1	MMAAHLVCL	9	55	539.2464911233276	NaN	0	539.2471313476562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),2 Oxidation (M)	_M(Oxidation (M))M(Oxidation (M))AAHLVC(Carbamidomethyl (C))L_	REV__ENST00000376234.7_3_13:101316529-101320909:-|nuORF	21.70233525837049	0.3635294413921169	2				NaN	NaN	0	NaN	11266	4618	15883
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15887	41.848	NaN	2074.2	30	0	437.64	0.037			+	7620	DKFIADIDGR	10	62	575.2988852490425	NaN	0	575.3008422851562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DKFIADIDGR_	REV__EIF4H|p.Q55R|1|0.2|ENSG00000106682|chr7:74187715-74187715|A/G|missense_variant	32.75053402867276	0.3926392905881664	2				NaN	NaN	0	NaN	11267	4618	15883
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15891	41.862	NaN	6059.3	30	0	1534.2	0.214	+			43412	TGKGTTLFSF	10	74	529.7797196958629	1057.5448864585258	2	529.7799072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TGKGTTLFSF_	ENSG00000082397|ENST00000341928|EPB41L3;EPB41L3|p.L792Afs*6|1|0.52|ENSG00000082397|chr18:5398120-5398121|-/T|frameshift_variant	56.43379154798735	0.3982744522255666	2				NaN	NaN	0	NaN	11268	4621	15890
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15892	41.865	NaN	2882.5	30	0	756.98	0.106			+	-1	AYTGPMTHAR	10	49	374.1796594648181	NaN	0	374.1797180175781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_AYTGPM(Oxidation (M))THAR_	REV__ENSG00000167261|ENST00000393847|DPEP2;REV__ENST00000268795.5_1_16:68025981-68027124:-|nuORF;REV__nc|ENSG00000167261|Q9H4A9-3|DPEP2	23.52269567125451	0.42010282974921537	2				NaN	NaN	0	NaN	11269	4621	15890
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15893	41.867	NaN	2327.5	30	0	190.94	0.035			+	8886	EESVNIQNG	9	58	495.22953175651514	988.4445105798303	2	495.2297668457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EESVNIQNG_	REV__SCYL2|p.M629I|1|0.3|ENSG00000136021|chr12:100335649-100335649|G/T|missense_variant	34.172542307311794	0.4838870758800184	2				NaN	NaN	0	NaN	11270	4621	15890
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15898	41.886	NaN	2135.9	30	0	223.85	0.214			+	22094	KSMLLINL	8	59	466.28531574511993	NaN	0	466.28564453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSMLLINL_	REV__ENST00000342992.10_3_2:179391348-179391462:-|nuORF	77.31757898189308	1.7418937515398478	2				NaN	NaN	0	NaN	11272	4624	15897
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15899	41.889	NaN	5492.9	30	0	481.46	0.106	+			38762	SSLSIGSIISK	11	66	546.3175041744863	1090.6204554157725	2	546.3194580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSLSIGSIISK_	ENSG00000167880|ENST00000301607|EVPL	104.42354056486148	0.051542069836817306	2				NaN	NaN	0	NaN	11273	4624	15897
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15900	41.891	NaN	1162	30	0	131.06	0.106			+	-1	WCCSCCSSGC	10	42	384.7722289779087	NaN	0	384.77191162109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_WCCSC(Carbamidomethyl (C))C(Carbamidomethyl (C))SSGC_	REV__ENST00000228741.7_1_12:96588285-96617411:+|nuORF	7.018692734479806	0.4201028297492154	2				NaN	NaN	0	NaN	11274	4624	15897
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15901	41.893	NaN	2106	30	0	317.83	0.035	+			34129	RSTEKNALN	9	67	516.7737293334983	NaN	0	516.7740478515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RSTEKNALN_	ENSG00000129873|ENST00000382867|CDY2B;ENSG00000172288|ENST00000306609|CDY1;ENSG00000172352|ENST00000382407|CDY1B;ENSG00000182415|ENST00000250838|CDY2A	34.172542307311794	0.30503706118289736	2				NaN	NaN	0	NaN	11275	4624	15897
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15909	41.912	NaN	2608.4	30	0	650.59	0.214	+			30973	QEQSYFVRL	9	64	585.3013402331369	1168.5881275330737	2	585.302001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QEQSYFVRL_	ENSG00000105355|ENST00000221957|PLIN3;nc|ENSG00000105355|O60664-2|PLIN3;nc|ENSG00000105355|O60664-3|PLIN3;nc|ENSG00000105355|O60664-4|PLIN3	39.252832667884924	0.4290233611298554	2				NaN	NaN	0	NaN	11280	4627	15908
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15910	41.915	NaN	2262.2	30	0	172.94	0.037				-1	QFPVCEICK	9	64	590.7769634496673	1179.5393739661345	2	590.7782592773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_QFPVC(Carbamidomethyl (C))EIC(Carbamidomethyl (C))K_	nc|ENSG00000188120|Q9NQZ3-2|DAZ1	24.20275056022122	0.577060078256802	2				NaN	NaN	0	NaN	11281	4627	15908
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15914	41.93	NaN	3129.4	30	0	386.39	0.214	+			18445	ISDIFRFLD	9	65	563.3004405141413	1124.5863280950825	2	563.301513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ISDIFRFLD_	ENSG00000169330|ENST00000305428|MINAR1	35.15202426646627	0.4747332964206883	2				NaN	NaN	0	NaN	11282	4630	15913
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15915	41.933	NaN	3410.7	30	0	568.45	0.037			+	16624	HGVSVRCLGGR	11	60	570.8063019849951	1139.5980510367901	2	570.8062133789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HGVSVRCLGGR_	REV__ENST00000465027.1_1_7:99686972-99687407:+|nuORF	36.446750945000026	0.6065623449959539	2				NaN	NaN	0	NaN	11283	4630	15913
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15923	41.965	NaN	4790.4	30	0	1186.8	0.215				-1	 	0	53	336.5341033168387	1006.5804805507162	3	336.5343322753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11285	4636	15922
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15924	41.969	NaN	3108.8	30	0	335.62	0.106	+			44242	TRVRTASIW	9	70	545.3113017280584	1088.6080505229168	2	545.312255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TRVRTASIW_	ENSG00000090612|ENST00000536435|ZNF268;ENST00000500625.7_3_12:133758097-133764492:+|nuORF;ENST00000537973.5_1_12:133758174-133764682:+|nuORF;ENST00000541975.2_2_12:133758174-133764492:+|nuORF;nc|ENSG00000090612|Q14587-4|ZNF268;nc|ENSG00000090612|Q14587-6|ZNF268;nc|ENSG00000090612|Q14587-7|ZNF268;nc|ENSG00000090612|Q14587-8|ZNF268;ZNF268|p.K199Nfs*12|1|0.37|ENSG00000090612|chr12:133202279-133202279|A/-|frameshift_variant	44.377184641726394	0.36891676396732553	2				NaN	NaN	0	NaN	11286	4636	15922
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15925	41.971	NaN	1847.8	30	0	361.71	0.106	+			41242	SVLGLLLKK	9	52	485.83633441229614	969.6581158913923	2	485.8360595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVLGLLLKK_	DUSP6|p.F272Sfs*8|1|0.32|ENSG00000139318|chr12:89350611-89350611|A/-|frameshift_variant;DUSP6|p.G169Pfs*6|1|0.33|ENSG00000139318|chr12:89350920-89350921|CC/-|frameshift_variant;ENSG00000139318|ENST00000279488|DUSP6;nc|ENSG00000139318|Q16828-2|DUSP6	29.14955571784316	0.5308295550522326	2				NaN	NaN	0	NaN	11287	4636	15922
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15926	41.973	NaN	1881.1	30	0	363.96	0.106	+			36563	SFQRVELL	8	54	496.2819261382838	990.5492993433676	2	496.2820129394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SFQRVELL_	ENSG00000168256|ENST00000393885|NKIRAS2;ENSG00000197885|ENST00000425478|NKIRAS1;nc|ENSG00000168256|Q9NYR9-2|NKIRAS2	37.15910966729921	0.6739408393984688	2				NaN	NaN	0	NaN	11288	4636	15922
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15927	41.974	NaN	4072.7	30	0	548.67	0.036	+			21857	KRKNHQGKD	9	62	555.8112360737123	NaN	0	555.8117065429688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KRKNHQGKD_	ENSG00000165113|ENST00000376371|GKAP1;nc|ENSG00000165113|Q5VSY0-2|GKAP1	39.252832667884924	0.27938773122138094	2				NaN	NaN	0	NaN	11289	4636	15922
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15931	41.989	NaN	3256.3	30	0	997.69	0.214				-1	 	0	56	609.3100784362696	608.3028019696695	1	609.3094482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11290	4639	15930
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15932	41.992	NaN	2698.3	30	0	287.67	0.106	+			29024	NSSEALLLSI	10	66	523.7904619815979	1045.5663710299957	2	523.7907104492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NSSEALLLSI_	tr|U7SQY6|U7SQY6_FUSNUDNAmethylaseadenine-specificdomain-containingprotein(Fragment)OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01632PE=4SV=1	28.081489160057373	0.6505064946289502	2				NaN	NaN	0	NaN	11291	4639	15930
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15933	41.994	NaN	1275.8	30	0	114.31	0.034			+	47123	VLNTAVDII	9	50	479.2844888267735	956.554424720347	2	479.2829895019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VLNTAVDII_	REV__ENST00000307637.4_1_12:8212234-8212315:-|nuORF	30.503639358989545	0.5181749237905803	2				NaN	NaN	0	NaN	11292	4639	15930
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15937	42.009	NaN	1768.7	30	0	153.84	0.214	+			24218	LERQIGVI	8	51	464.28489321647123	926.5552334997425	2	464.2844543457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LERQIGVI_	NCOR2|p.A1124V|1|0.18|ENSG00000196498|chr12:124355442-124355442|G/A|missense_variant	39.252832667884924	0.6609488554722044	2				NaN	NaN	0	NaN	11293	4642	15936
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15938	42.012	NaN	2561.6	30	0	587.9	0.106			+	16863	HPGEPAPELAS	11	61	368.84800116429994	NaN	0	368.8479309082031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HPGEPAPELAS_	REV__ENSG00000204839|ENST00000398882|MROH6	35.17822180527639	0.40864158092774266	2				NaN	NaN	0	NaN	11294	4642	15936
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15939	42.014	NaN	1596	30	0	145.01	0.106	+			36589	SGAAVLQLQF	10	54	517.2886962890625	NaN	0	517.2886962890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SGAAVLQLQF_	ENSG00000145087|ENST00000471454|STXBP5L;nc|ENSG00000145087|Q9Y2K9|STXBP5L;STXBP5L|p.L120V|1|0.4|ENSG00000145087|chr3:121041770-121041770|T/G|missense_variant	32.81241826257853	0.3924360933802784	2				NaN	NaN	0	NaN	11295	4642	15936
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15940	42.016	NaN	729.7	30	0	101.78	0.033	+			29243	NWPLAGAL	8	37	421.2337646484375	NaN	0	421.2337646484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NWPLAGAL_	ENST00000268383.6_1_16:22357946-22358198:-|nuORF	26.79610172149135	1.7418937515398478	2				NaN	NaN	0	NaN	11296	4642	15936
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15945	42.031	NaN	2288.9	30	0	293.89	0.144			+	9499	EKTPPVLKI	9	59	512.823844320865	1023.63313570853	2	512.8236694335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EKTPPVLKI_	REV__ENSG00000188738|ENST00000424728|FSIP2;REV__FSIP2|p.K6528Nfs*5|1|0.33|ENSG00000188738|chr2:185808884-185808884|A/-|frameshift_variant;REV__FSIP2|p.V6322*|1|0.42|ENSG00000188738|chr2:185808265-185808265|A/-|frameshift_variant	35.15202426646627	0.4747332964206883	2				NaN	NaN	0	NaN	11298	4645	15944
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15950	42.047	NaN	3779.9	30	0	394.58	0.214	+			10867	FAVASVGHGVF	11	73	545.7877414166884	1089.5609299001767	2	545.787841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FAVASVGHGVF_	ENSG00000100647|ENST00000342745|SUSD6;ENST00000556993.1_1_14:70125309-70170323:+|nuORF;SUSD6|p.L44Pfs*33|1|0.41|ENSG00000100647|chr14:69703398-69703399|-/C|frameshift_variant;SUSD6|p.R58Gfs*7|1|0.22|ENSG00000100647|chr14:69703441-69703441|C/-|frameshift_variant	35.61828744233558	0.616184410043185	2				NaN	NaN	0	NaN	11300	4648	15949
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15951	42.051	NaN	3520	30	0	287.85	0.036	+			12033	FYISPVNKL	9	68	540.8082940206235	1079.602035108047	2	540.808349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FYISPVNKL_	ENSG00000105778|ENST00000318709|AVL9;nc|ENSG00000105778|Q8NBF6-2|AVL9	87.69643885390035	0.07135982304947239	2				NaN	NaN	0	NaN	11301	4648	15949
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15956	42.066	NaN	4077.6	30	0	320.54	0.214	+			49698	VYKVVGNLL	9	72	502.80842068714327	1003.6022884410866	2	503.3080139160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYKVVGNLL_	ENSG00000183856|ENST00000361170|IQGAP3;IQGAP3|p.Q1205Sfs*31|1|0.4|ENSG00000183856|chr1:156534628-156534628|G/-|frameshift_variant	108.08749611321984	0.03094949498378333	2				NaN	NaN	0	NaN	11303	4651	15955
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15957	42.07	NaN	3808.1	30	0	412.53	0.106			+	9137	EGLQKFCL	8	66	497.75503915569834	993.4955253781967	2	497.7548522949219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_EGLQKFC(Carbamidomethyl (C))L_	REV__ENSG00000006062|ENST00000344686|MAP3K14	82.24051045832904	0.30490469762271794	2				NaN	NaN	0	NaN	11304	4651	15955
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15958	42.072	NaN	2228.7	30	0	246.11	0.035	+			14614	GTGIVGVFVK	10	62	488.79492309692694	NaN	0	488.794921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTGIVGVFVK_	ENSG00000107438|ENST00000329399|PDLIM1	44.377184641726394	0.34115073642966565	2				NaN	NaN	0	NaN	11305	4651	15955
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15964	42.088	NaN	2434.9	30	0	397.05	0.214	+			30406	PVTHTKIDW	9	61	548.792890845896	1095.5712287585918	2	548.7930297851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PVTHTKIDW_	CAPZA1|p.R266H|1|0.08|ENSG00000116489|chr1:112670068-112670068|G/A|missense_variant	55.50420428727701	0.2510918378945873	2				NaN	NaN	0	NaN	11308	4654	15963
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15965	42.092	NaN	2115.8	30	0	227.94	0.106	+			45498	TYDYNFHSF	9	62	597.2491688927405	1192.483784852281	2	597.2490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TYDYNFHSF_	ASH1L|p.K2377Nfs*5|1|0.28|ENSG00000116539|chr1:155354570-155354570|T/-|frameshift_variant;ASH1L|p.S2309Ifs*11|1|0.64|ENSG00000116539|chr1:155357635-155357636|-/T|frameshift_variant;ENSG00000116539|ENST00000392403|ASH1L;nc|ENSG00000116539|Q9NR48|ASH1L	42.86426827375447	0.38666266728046506	2				NaN	NaN	0	NaN	11309	4654	15963
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15966	42.094	NaN	1451.4	30	0	225.76	0.106			+	47307	VNRYREKLKFL	11	48	489.2948303222656	NaN	0	489.2948303222656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VNRYREKLKFL_	REV__ENSG00000186815|ENST00000335509|TPCN1;REV__ENST00000428632.7_1_12:113682520-113726187:+|nuORF;REV__ENST00000552077.5_1_12:113664633-113726187:+|nuORF;REV__nc|ENSG00000186815|Q9ULQ1-2|TPCN1;REV__nc|ENSG00000186815|Q9ULQ1-3|TPCN1	27.64392233501311	0.4422187622456888	2				NaN	NaN	0	NaN	11310	4654	15963
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15967	42.095	NaN	2187.8	30	0	172.51	0.036				-1	MSLLDGLASSP	11	63	553.7744750976562	NaN	0	553.7744750976562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_M(Oxidation (M))SLLDGLASSP_	ENSG00000154144|ENST00000441174|TBRG1;ENST00000452080.5_1_11:124492979-124496602:+|nuORF;ENST00000473629.6_1_11:124492979-124496722:+|nuORF;TBRG1|p.E142Rfs*53|1|0.3|ENSG00000154144|chr11:124625866-124625867|-/A|frameshift_variant;TBRG1|p.E197Rfs*29|1|0.13|ENSG00000154144|chr11:124626603-124626603|G/-|frameshift_variant	36.446750945000026	0.40298828388271424	2				NaN	NaN	0	NaN	11311	4654	15963
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15971	42.11	NaN	3739.2	30	0	412.82	0.144			+	-1	CLVEIPTSM	9	63	533.2530488925925	1064.4915448519848	2	533.754638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_C(Carbamidomethyl (C))LVEIPTSM(Oxidation (M))_	REV__CSNK1D|p.R358Gfs*12|1|0.25|ENSG00000141551|chr17:82249000-82249000|G/-|frameshift_variant;REV__CSNK1D|p.T344Hfs*26|1|0.26|ENSG00000141551|chr17:82249459-82249459|G/-|frameshift_variant;REV__ENSG00000141551|ENST00000314028|CSNK1D;REV__ENSG00000213923|ENST00000396832|CSNK1E;REV__ENST00000431611.5_2_22:38689311-38696738:-|nuORF;REV__ENST00000442216.1_2_22:38693892-38696026:-|nuORF;REV__ENST00000578904.1_1_17:80208040-80213403:-|nuORF;REV__ENST00000581108.5_1_17:80207265-80210400:-|nuORF;REV__ENST00000581241.5_1_17:80206597-80211051:-|nuORF;REV__ENST00000584377.5_1_17:80203885-80211156:-|nuORF;REV__nc|ENSG00000141551|P48730-2|CSNK1D	53.351449002276354	0.2690372970092375	2				NaN	NaN	0	NaN	11312	4657	15970
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15976	42.127	NaN	2336.2	30	0	595.68	0.214	+			21470	KNGSGWDAD	9	55	475.20391859787776	948.3932842625555	2	475.20367431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KNGSGWDAD_	ENSG00000078687|ENST00000696270|TNRC6C;nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;TNRC6C|p.E657Rfs*3|1|0.32|ENSG00000078687|chr17:78051026-78051026|G/-|frameshift_variant;TNRC6C|p.G923Dfs*6|2|0.46|ENSG00000078687|chr17:78067906-78067906|A/-|frameshift_variant;TNRC6C|p.K926Rfs*3|1|0.18|ENSG00000078687|chr17:78067919-78067919|A/-|frameshift_variant	22.579656572578934	0.5922287541734749	2				NaN	NaN	0	NaN	11314	4660	15975
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15977	42.13	NaN	31711	30	0	3911.6	0.106			+	13319	GKKGAGGG	8	89	316.18042390600186	630.3462948788037	2	316.1805725097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GKKGAGGG_	REV__TBX18|p.E63K|1|0.41|ENSG00000112837|chr6:84763995-84763995|C/T|missense_variant	8.822329726475273	0.7821568878176242	2				NaN	NaN	0	NaN	11315	4660	15975
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15978	42.132	NaN	2196.9	30	0	284.37	0.038	+			24257	LEVEGVEGSMW	11	56	618.2868613763708	NaN	0	618.288330078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LEVEGVEGSMW_	ENSG00000013523|ENST00000251089|ANGEL1	20.94693142431847	0.456735970842152	2				NaN	NaN	0	NaN	11316	4660	15975
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15983	42.147	NaN	4389.4	30	0	444.18	0.145				-1	GQLPQMLGCTL	11	74	588.7916245380306	1175.5686961428612	2	588.791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_GQLPQM(Oxidation (M))LGCTL_	WDFY4|p.R948Tfs*54|1|0.33|ENSG00000128815|chr10:48775775-48775776|-/CA|frameshift_variant	44.377184641726394	0.49804979881800077	2				NaN	NaN	0	NaN	11318	4663	15982
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15996	42.189	NaN	1457.8	30	0	226.82	0.214			+	23747	LCARSPLVL	9	50	486.28966598977	970.56477904634	2	486.2889099121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LCARSPLVL_	REV__ENST00000493195.5_1_1:159902482-159902782:-|nuORF	40.5726180659479	0.4135428067754104	2				NaN	NaN	0	NaN	11325	4669	15995
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	15997	42.192	NaN	1363.6	30	0	191.08	0.036				-1	ACLSVCPPGGI	11	53	537.2591980976413	NaN	0	537.2599487304688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_ACLSVC(Carbamidomethyl (C))PPGGI_	CON__Q7RTS7;ENSG00000170484|ENST00000305620|KRT74	34.172542307311794	0.4131234684587831	2				NaN	NaN	0	NaN	11326	4669	15995
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16001	42.207	NaN	6150.8	30	0	1663.8	0.214	+			31744	QPAQNATT	8	69	415.703369710663	829.3921864881261	2	415.70318603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QPAQNATT_	ENST00000474031.5_1_17:39671722-39674667:-|nuORF;nc|ENSG00000171346|P19012-2|KRT15	24.20275056022122	0.7724576178584145	2				NaN	NaN	0	NaN	11327	4672	16000
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16002	42.211	NaN	4649.8	30	0	262.15	0.106			+	9730	EMWGPFIPLS	10	83	588.7916245380306	1175.5686961428612	2	588.7918701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EMWGPFIPLS_	REV__nc|ENSG00000138835|P49796|RGS3	30.503639358989545	0.6307262373768582	2				NaN	NaN	0	NaN	11328	4672	16000
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16003	42.213	NaN	2707.1	30	0	308.81	0.036				-1	MEGELRILL	9	64	545.3013433722699	NaN	0	545.301513671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))EGELRILL_	ENST00000394531.3_1_11:64044386-64051659:-|nuORF	40.5726180659479	0.27166212580479165	2				NaN	NaN	0	NaN	11329	4672	16000
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16008	42.228	NaN	6408.4	30	0	2303.6	0.214				-1	 	0	67	347.20358660912603	346.19631014252604	1	347.2032470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11331	4675	16007
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16009	42.232	NaN	2433.8	30	0	235.3	0.106	+			42752	TDPASSWALVI	11	62	580.3051338987078	1158.5957148642156	2	580.3050537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TDPASSWALVI_	ENST00000525266.5_1_8:146062833-146071517:+|nuORF	39.252832667884924	0.5681665794958463	2				NaN	NaN	0	NaN	11332	4675	16007
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16010	42.234	NaN	1427.4	30	0	237.69	0.106	+			18426	ISAVKIIPV	9	43	470.3158674424771	938.6171819517542	2	470.3151550292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ISAVKIIPV_	ENSG00000095637|ENST00000371247|SORBS1;nc|ENSG00000095637|Q9BX66-11|SORBS1;nc|ENSG00000095637|Q9BX66-2|SORBS1;nc|ENSG00000095637|Q9BX66-3|SORBS1;nc|ENSG00000095637|Q9BX66-5|SORBS1;nc|ENSG00000095637|Q9BX66-6|SORBS1;nc|ENSG00000095637|Q9BX66-9|SORBS1;SORBS1|p.A1135Qfs*17|1|0.24|ENSG00000095637|chr10:95336757-95336757|C/-|frameshift_variant	42.396135135203025	0.392153681582562	2				NaN	NaN	0	NaN	11333	4675	16007
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16011	42.236	NaN	1071.4	30	0	83.694	0.034	+			24757	LHTVLGIAT	9	45	462.77943011818365	923.5443073031673	2	462.7789001464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LHTVLGIAT_	nc|ENSG00000184321|Q9H342|OR51J1	25.450171626174864	0.5654022654467333	2				NaN	NaN	0	NaN	11334	4675	16007
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16016	42.251	NaN	2579.2	30	0	364.39	0.214	+			43288	TFKELANEF	9	74	549.7767997573804	1097.5390465815608	2	550.2789916992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TFKELANEF_	ENSG00000065361|ENST00000267101|ERBB3;ERBB3|p.R1080Vfs*22|1|0.14|ENSG00000065361|chr12:56101093-56101093|C/-|frameshift_variant;nc|ENSG00000065361|P21860-4|ERBB3;nc|ENSG00000065361|P21860-5|ERBB3	82.7504851949679	0.08565546331141553	2				NaN	NaN	0	NaN	11336	4678	16015
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16017	42.254	NaN	2892.5	30	0	682.95	0.034	+			1100	AELGNMQGL	9	54	466.72898597841856	931.4434190236371	2	466.7287902832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AELGNMQGL_	CON__P05787;CON__Q9H552;ENSG00000170421|ENST00000692008|KRT8;ENST00000405771.3_1_6:134619244-134619385:-|nuORF;ENST00000409686.2_1_9:102067468-102068890:+|nuORF;ENST00000414328.2_1_1:157043381-157043870:+|nuORF;ENST00000441609.1_1_6:162989483-162989972:+|nuORF;ENST00000450021.1_1_2:183936291-183936849:-|nuORF;ENST00000550170.5_1_12:53294858-53298765:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	54.776311868738084	0.25715957988447635	2				NaN	NaN	0	NaN	11337	4678	16015
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16022	42.269	NaN	5865.7	30	0	2061.1	0.139			+	13690	GPLGPPGV	8	63	347.20114462488795	692.3877363165759	2	347.19940185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GPLGPPGV_	REV__ENSG00000204248|ENST00000341947|COL11A2;REV__nc|ENSG00000204248|P13942-2|COL11A2;REV__nc|ENSG00000204248|P13942-3|COL11A2;REV__nc|ENSG00000204248|P13942-4|COL11A2;REV__nc|ENSG00000204248|P13942-5|COL11A2;REV__nc|ENSG00000204248|P13942-6|COL11A2;REV__nc|ENSG00000204248|P13942-7|COL11A2;REV__nc|ENSG00000204248|P13942-8|COL11A2;REV__nc|ENSG00000204248|P13942|COL11A2	24.504012794735996	0.7701314986472447	2				NaN	NaN	0	NaN	11339	4681	16021
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16028	42.287	NaN	3079.2	30	0	329.82	0.145				-1	RELVMYGLK	9	72	562.8084520081269	1123.6023510830537	2	562.808837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_RELVM(Oxidation (M))YGLK_	tr|U7STW0|U7STW0_FUSNUHydroxylaminereductaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=hcpPE=3SV=1	40.77816245573522	0.41113185337114944	2				NaN	NaN	0	NaN	11342	4684	16027
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16035	42.307	NaN	5530.3	30	0	1144.5	0.214				-1	 	0	54	336.5341033168387	1006.5804805507162	3	336.5343017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11346	4687	16034
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16036	42.311	NaN	3215.5	30	0	435.59	0.106	+			29878	PLHPHQGRL	9	62	527.8005233802867	1053.5864938273733	2	527.8001098632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PLHPHQGRL_	nc|ENSG00000010030|Q9Y603-2|ETV7	49.44154591367651	0.3095138337212152	2				NaN	NaN	0	NaN	11347	4687	16034
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16037	42.313	NaN	2593.7	30	0	269.56	0.035			+	21384	KMKNKRFP	8	61	524.8085327148438	NaN	0	524.8085327148438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KMKNKRFP_	REV__NEK5|p.E460K|2|0.21|ENSG00000197168|chr13:52087352-52087352|C/T|missense_variant	28.2542754592877	1.7418937515398478	2				NaN	NaN	0	NaN	11348	4687	16034
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16041	42.327	NaN	2049.8	30	0	213.86	0.214	+			49906	VYTTNIQEL	9	67	540.7818865687595	1079.549220204319	2	540.7820434570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYTTNIQEL_	ENSG00000110031|ENST00000395074|LPXN;ENST00000529915.1_1_11:58322280-58343350:-|nuORF;nc|ENSG00000110031|O60711-2|LPXN	59.93077597824379	0.21419174904018318	2				NaN	NaN	0	NaN	11349	4690	16040
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16042	42.33	NaN	2641.7	30	0	592.73	0.106			+	-1	ALPCSSRNCL	10	49	374.17954562081457	1119.5168074626438	3	374.1794128417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_ALPC(Carbamidomethyl (C))SSRNCL_	REV__ENSG00000198042|ENST00000360128|MAK16;REV__ENST00000517567.5_1_8:33342724-33346269:+|nuORF;REV__ENST00000520763.5_1_8:33342724-33346658:+|nuORF	23.52269567125451	0.6877354443478558	2				NaN	NaN	0	NaN	11350	4690	16040
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16043	42.332	NaN	1209.4	30	0	186.62	0.032			+	-1	CTCMCACAC	9	49	384.7722289779087	NaN	0	384.7725524902344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	4 Carbamidomethyl (C),Oxidation (M)	_CTC(Carbamidomethyl (C))M(Oxidation (M))C(Carbamidomethyl (C))AC(Carbamidomethyl (C))AC(Carbamidomethyl (C))_	REV__ENST00000544665.7_1_16:31343047-31343377:+|nuORF	15.641811463095205	0.38404136392510424	2				NaN	NaN	0	NaN	11351	4690	16040
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16047	42.346	NaN	1130.5	30	0	60.559	0.214	+			37212	SKKGGAGG	8	52	331.1855470031091	660.3565410730182	2	331.185791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SKKGGAGG_	PDCD4|p.P113S|1|0.24|ENSG00000150593|chr10:110881526-110881526|C/T|missense_variant	4.316272785109212	0.7769738875864834	2				NaN	NaN	0	NaN	11352	4693	16046
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16048	42.35	NaN	1508.6	30	0	168.69	0.035	+			45714	VAALWEKLS	9	54	508.79217529296875	NaN	0	508.79217529296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VAALWEKLS_	ENST00000320474.8_1_3:160821276-160822176:-|nuORF;ENST00000460353.1_1_3:160821276-160822176:-|nuORF;ENST00000478383.5_1_3:160821891-160822176:-|nuORF	30.317721548370564	0.32449924987115025	2				NaN	NaN	0	NaN	11353	4693	16046
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16054	42.366	NaN	3410.9	30	0	286.29	0.214	+			20367	KESQVLLTL	9	62	515.8100729475793	1029.6055929619586	2	516.3104248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KESQVLLTL_	ENSG00000132912|ENST00000447998|DCTN4;nc|ENSG00000132912|Q9UJW0-2|DCTN4;nc|ENSG00000132912|Q9UJW0-3|DCTN4	36.31764250033197	0.4634519667168888	2				NaN	NaN	0	NaN	11356	4696	16053
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16055	42.369	NaN	1077.2	30	0	72.697	0.03	+			17145	HSTEVSCDS	9	42	322.12716752179693	NaN	0	322.1271057128906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HSTEVSCDS_	ADCY9|p.A149Rfs*38|1|0.11|ENSG00000162104|chr16:4114999-4114999|G/-|frameshift_variant;ADCY9|p.L286Cfs*19|1|0.23|ENSG00000162104|chr16:4114588-4114588|C/-|frameshift_variant;ADCY9|p.P366Qfs*18|1|0.03|ENSG00000162104|chr16:4114339-4114346|GTTCTTGG/-|frameshift_variant;ENSG00000162104|ENST00000294016|ADCY9	19.1035232394073	0.3723251548669699	2				NaN	NaN	0	NaN	11357	4696	16053
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16060	42.384	NaN	2682.3	30	0	547.56	0.214	+			12922	GESILKVNL	9	61	486.79004058229674	971.5655282313935	2	486.7897644042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GESILKVNL_	ENSG00000162174|ENST00000415229|ASRGL1;nc|ENSG00000162174|Q7L266-2|ASRGL1	124.08010499294276	0.018729767491916592	2				NaN	NaN	0	NaN	11359	4699	16059
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16061	42.388	NaN	1923	30	0	154.81	0.036	+			50565	YAVHLQFNL	9	57	552.7966768922233	NaN	0	552.795654296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YAVHLQFNL_	AGMO|p.G305Vfs*31|1|0.2|ENSG00000187546|chr7:15387449-15387449|C/-|frameshift_variant;AGMO|p.V257Sfs*10|1|0.3|ENSG00000187546|chr7:15390724-15390725|-/T|frameshift_variant;ENSG00000187546|ENST00000342526|AGMO	54.776311868738084	0.17377682019723872	2				NaN	NaN	0	NaN	11360	4699	16059
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16067	42.404	NaN	8258.3	30	0	859.19	0.214	+			6572	AYLEAIHNF	9	75	539.2721956021899	1076.5298382711796	2	539.2721557617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AYLEAIHNF_	ENSG00000042753|ENST00000263270|AP2S1	98.62937762414208	0.04060045538121712	2				NaN	NaN	0	NaN	11363	4702	16066
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16068	42.407	NaN	2806.2	30	0	318.75	0.106			+	33399	RICLERAR	8	60	508.7925174057351	1015.5704818782702	2	508.79217529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RICLERAR_	REV__ENSG00000157423|ENST00000393567|HYDIN;REV__HYDIN|p.E2653Kfs*4|1|0.27|ENSG00000157423|chr16:70918259-70918259|T/-|frameshift_variant;REV__HYDIN|p.F4256Vfs*111|1|0.27|ENSG00000157423|chr16:70849833-70849834|-/C|frameshift_variant;REV__HYDIN|p.V3416Gfs*64|1|0.15|ENSG00000157423|chr16:70879725-70879726|-/ACTCC|frameshift_variant	30.503639358989545	0.7238069182250283	2				NaN	NaN	0	NaN	11364	4702	16066
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16069	42.409	NaN	2023.4	30	0	151.06	0.106	+			18485	ISGFYKLL	8	60	470.7801513671875	NaN	0	470.7801513671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ISGFYKLL_	ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC;PRKDC|p.D2437Wfs*3|1|0.11|ENSG00000253729|chr8:47840161-47840162|-/CA|frameshift_variant;PRKDC|p.E1557Sfs*16|1|0.16|ENSG00000253729|chr8:47886051-47886051|C/-|frameshift_variant;PRKDC|p.G1227Vfs*50|2|0.31|ENSG00000253729|chr8:47893306-47893306|C/-|frameshift_variant;PRKDC|p.K3681Nfs*6|1|0.32|ENSG00000253729|chr8:47785174-47785177|TTCT/-|frameshift_variant;PRKDC|p.M3670*|1|0.5|ENSG00000253729|chr8:47785212-47785212|T/-|frameshift_variant;PRKDC|p.M3846Cfs*12|1|0.13|ENSG00000253729|chr8:47779047-47779047|T/-|frameshift_variant;PRKDC|p.M4020Cfs*2|1|0.31|ENSG00000253729|chr8:47776968-47776968|T/-|frameshift_variant;PRKDC|p.N3605Kfs*3|1|0.22|ENSG00000253729|chr8:47788993-47788994|-/T|frameshift_variant;PRKDC|p.N4037Ifs*15|1|0.17|ENSG00000253729|chr8:47776916-47776916|T/-|frameshift_variant;PRKDC|p.R2704Gfs*13|2|0.34|ENSG00000253729|chr8:47834238-47834238|T/-|frameshift_variant;PRKDC|p.S3402Ifs*16|1|0.04|ENSG00000253729|chr8:47799302-47799303|-/AAACCGTGAGTTAGAGGAGGTAA|frameshift_variant;PRKDC|p.S4099Qfs*6|1|0.25|ENSG00000253729|chr8:47774265-47774265|A/-|frameshift_variant;PRKDC|p.T3268Pfs*7|1|0.5|ENSG00000253729|chr8:47803426-47803426|T/-|frameshift_variant;PRKDC|p.W3401Cfs*4|1|0.01|ENSG00000253729|chr8:47799304-47799305|-/AATGAATA|frameshift_variant	45.9519527083369	1.7418937515398478	2				NaN	NaN	0	NaN	11365	4702	16066
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16070	42.411	NaN	1507.7	30	0	147.32	0.029				-1	 	0	50	307.21144106669976	306.2041646000998	1	307.21148681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11366	4702	16066
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16081	42.458	NaN	1140.6	30	0	63.538	0.14				-1	 	0	53	391.2251618309298	780.4357707286596	2	391.22509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11368	4711	16080
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16086	42.474	NaN	1539	30	0	145.13	0.145	+			19043	IYGSGHYITF	10	48	579.2855386233767	NaN	0	579.2857055664062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IYGSGHYITF_	ENSG00000198788|ENST00000675028|MUC2;nc|ENSG00000198788|Q02817|MUC2	26.69291269510374	0.4125295221340092	2				NaN	NaN	0	NaN	11370	4714	16085
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16091	42.491	NaN	2993.3	30	0	200.26	0.147			+	-1	CMYRFKEETFV	11	76	755.3489525867245	1508.683352240249	2	755.847412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_C(Carbamidomethyl (C))MYRFKEETFV_	REV__ENSG00000174371|ENST00000366548|EXO1;REV__nc|ENSG00000174371|Q9UQ84-4|EXO1	24.519189625965996	0.7326048944360514	2				NaN	NaN	0	NaN	11372	4717	16090
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16100	42.525	NaN	2823	30	0	352.38	0.214	+			12764	GELKIAYQL	9	67	517.7976326656213	1033.5807123980426	2	517.7977905273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GELKIAYQL_	ENSG00000184432|ENST00000333188|COPB2;nc|ENSG00000184432|P35606-2|COPB2	58.62960593111931	0.22503835759089574	2				NaN	NaN	0	NaN	11375	4723	16099
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16101	42.529	NaN	2738	30	0	271.99	0.106			+	46786	VHILFSEVM	9	71	545.7822878277929	1089.5500227223856	2	545.783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_VHILFSEVM(Oxidation (M))_	REV__ENST00000371335.4_1_X:119571451-119571553:-|nuORF	60.29395666154354	0.21116425950210296	2				NaN	NaN	0	NaN	11376	4723	16099
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16102	42.531	NaN	1754.2	30	0	264.29	0.035	+			20616	KGDTIQLYL	9	67	525.7962036132812	NaN	0	525.7962036132812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KGDTIQLYL_	ENSG00000125999|ENST00000253354|BPIFB1;ENST00000464032.1_1_20:31886647-31890426:+|nuORF;nc|ENSG00000125999|Q8TDL5-2|BPIFB1	24.519189625965996	0.35377483217337163	2				NaN	NaN	0	NaN	11377	4723	16099
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16112	42.563	NaN	2885.4	30	0	161.86	0.144			+	28241	NDDECLPTL	9	67	538.7332213445474	1075.4518897558946	2	538.733642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_NDDEC(Carbamidomethyl (C))LPTL_	REV__ENSG00000118308|ENST00000556887|IRAG2;REV__nc|ENSG00000118308|Q12912|IRAG2	58.78195531508484	0.22376836668196862	2				NaN	NaN	0	NaN	11381	4729	16111
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16117	42.58	NaN	8166.8	30	0	786	0.214	+			14799	GTLDYILQR	9	75	539.7984394741991	1077.582326015198	2	539.7984619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTLDYILQR_	ENSG00000140718|ENST00000471389|FTO	124.08010499294276	0.018729767491916592	2				NaN	NaN	0	NaN	11383	4732	16116
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16118	42.583	NaN	1956.5	30	0	118.12	0.106	+			23195	KYAALFSQM	9	59	529.7708123499514	1057.5270717667026	2	529.7704467773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KYAALFSQM_	ENSG00000020577|ENST00000554335|SAMD4A;ENSG00000179134|ENST00000610417|SAMD4B;nc|ENSG00000020577|Q9UPU9-2|SAMD4A;nc|ENSG00000020577|Q9UPU9-3|SAMD4A	49.536043120802724	0.308405419312776	2				NaN	NaN	0	NaN	11384	4732	16116
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16119	42.585	NaN	803.4	30	0	121.77	0.038				-1	VMIVMLAICF	10	33	404.87677001953125	NaN	0	404.87677001953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_VMIVM(Oxidation (M))LAIC(Carbamidomethyl (C))F_	ENSG00000152266|ENST00000282091|PTH	18.262085536374414	0.4201028297492154	2				NaN	NaN	0	NaN	11385	4732	16116
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16127	42.616	NaN	1849.6	30	0	210.45	0.139	+			30046	PPVGPIGG	8	55	347.20114462488795	692.3877363165759	2	347.199462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PPVGPIGG_	ENSG00000010244|ENST00000394670|ZNF207;nc|ENSG00000010244|O43670-2|ZNF207;nc|ENSG00000010244|O43670-3|ZNF207;nc|ENSG00000010244|O43670|ZNF207	24.504012794735996	0.7701314986472447	2				NaN	NaN	0	NaN	11387	4738	16126
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16131	42.632	NaN	1760.8	30	0	248.56	0.141			+	-1	GPGGPWCL	8	54	422.1947675073865	842.374982081573	2	422.6925048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GPGGPWC(Carbamidomethyl (C))L_	REV__ENST00000389817.7_1_11:17417252-17419904:-|nuORF	33.49298260027079	0.7007254697536482	2				NaN	NaN	0	NaN	11388	4741	16130
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16138	42.652	NaN	4595	30	0	1142	0.214				-1	 	0	47	336.5341033168387	1006.5804805507162	3	336.5343017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11392	4744	16137
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16139	42.655	NaN	2527.4	30	0	265.43	0.106				-1	 	0	63	517.2858018577475	516.2785253911475	1	517.2854614257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11393	4744	16137
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16140	42.657	NaN	1405.3	30	0	215.46	0.106	+			13658	GNGQPIILL	9	50	462.77924077433505	923.5439286154701	2	462.77862548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GNGQPIILL_	tr|U7T6W5|U7T6W5_FUSNUCarboxyltransferasedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00031PE=4SV=1	25.450171626174864	0.5654022654467333	2				NaN	NaN	0	NaN	11394	4744	16137
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16141	42.659	NaN	2275.3	30	0	130.68	0.106			+	50152	WKHTLVHK	8	66	524.8055785139504	NaN	0	524.8067016601562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_WKHTLVHK_	REV__ENST00000356189.5_1_10:15120101-15120344:-|nuORF	35.61828744233558	1.7418937515398478	2				NaN	NaN	0	NaN	11395	4744	16137
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16142	42.661	NaN	1449.6	30	0	182.14	0.038			+	50090	WGLSSEHGLRN	11	67	628.3103193477946	1254.606085762389	2	628.8119506835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_WGLSSEHGLRN_	REV__ENST00000305123.5_1_2:227661928-227662057:-|nuORF	32.03412808689991	0.6537793186749145	2				NaN	NaN	0	NaN	11396	4744	16137
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16148	42.677	NaN	1490	30	0	114.33	0.214	+			23367	KYVYVVTEL	9	62	557.3134404101389	NaN	0	557.3134155273438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KYVYVVTEL_	ENSG00000177189|ENST00000379565|RPS6KA3;RPS6KA3|p.N713Rfs*13|1|0.08|ENSG00000177189|chrX:20155483-20155484|-/AGCACAAGTTC|frameshift_variant	62.107414245175825	0.1403307765918332	2				NaN	NaN	0	NaN	11399	4747	16147
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16149	42.68	NaN	2963.8	30	0	410.79	0.106	+			41579	SVQGFFLNH	9	64	524.7643726528013	1047.5141923724025	2	524.7640380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVQGFFLNH_	ENSG00000180011|ENST00000322342|PTGR3;nc|ENSG00000180011|Q8N4Q0-2|PTGR3	45.97224482568171	0.3502073465782774	2				NaN	NaN	0	NaN	11400	4747	16147
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16150	42.682	NaN	1704.1	30	0	357.64	0.041			+	30107	PRKIPVKN	8	55	476.3063747293877	NaN	0	476.30621337890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PRKIPVKN_	REV__ENSG00000113532|ENST00000231461|ST8SIA4;REV__ST8SIA4|p.F303Lfs*8|1|0.06|ENSG00000113532|chr5:100812021-100812022|-/TGTGTAAA|frameshift_variant	18.324413293986947	1.7418937515398478	2				NaN	NaN	0	NaN	11401	4747	16147
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16156	42.699	NaN	2012.2	30	0	172.93	0.145			+	17522	IDLHIGEFY	9	60	553.7795908964938	1105.5446288597875	2	554.28076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IDLHIGEFY_	REV__ENSG00000176208|ENST00000321990|ATAD5	40.5726180659479	0.4135428067754104	2				NaN	NaN	0	NaN	11404	4750	16155
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16162	42.717	NaN	1713.9	30	0	136.66	0.214			+	-1	MEKRWDKF	8	64	578.2864293010683	1154.5583056689366	2	578.2871704101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))EKRWDKF_	REV__ENSG00000198900|ENST00000361337|TOP1;REV__TOP1|p.C453Mfs*40|1|0.27|ENSG00000198900|chr20:41112823-41112824|-/A|frameshift_variant;REV__TOP1|p.K333Nfs*3|1|0.34|ENSG00000198900|chr20:41100075-41100075|A/-|frameshift_variant;REV__TOP1|p.T639Lfs*6|1|0.45|ENSG00000198900|chr20:41118257-41118257|A/-|frameshift_variant	38.80614096846853	0.6637206697844082	2				NaN	NaN	0	NaN	11407	4753	16161
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16163	42.72	NaN	1294.9	30	0	151.97	0.034			+	37590	SLPEAPAVR	9	56	470.26800537109375	NaN	0	470.26800537109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLPEAPAVR_	REV__ENSG00000168502|ENST00000695636|MTCL1;REV__MTCL1|p.G1084Vfs*116|1|0.23|ENSG00000168502|chr18:8798144-8798144|G/-|frameshift_variant;REV__MTCL1|p.G604Afs*38|1|0.5|ENSG00000168502|chr18:8783840-8783840|G/-|frameshift_variant;REV__MTCL1|p.L1858Wfs*5|1|0.26|ENSG00000168502|chr18:8826125-8826125|C/-|frameshift_variant;REV__MTCL1|p.L694Cfs*5|1|0.37|ENSG00000168502|chr18:8784107-8784107|C/-|frameshift_variant;REV__MTCL1|p.P1448Afs*83|1|0.4|ENSG00000168502|chr18:8824888-8824889|-/G|frameshift_variant;REV__MTCL1|p.P1841Lfs*22|1|0.05|ENSG00000168502|chr18:8826071-8826071|C/-|frameshift_variant;REV__MTCL1|p.W1259Efs*14|1|0.09|ENSG00000168502|chr18:8813191-8813192|-/GAGCC|frameshift_variant;REV__nc|ENSG00000168502|Q9Y4B5|MTCL1	34.172542307311794	0.30503706118289736	2				NaN	NaN	0	NaN	11408	4753	16161
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16167	42.734	NaN	970.2	30	0	274.51	0.214	+			23874	LDGEAGCPP	9	34	429.68706670497227	857.3595804767446	2	429.6871032714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LDGEAGCPP_	ENST00000567017.5_1_16:718199-721765:+|nuORF;ENST00000568636.5_1_16:720150-721765:+|nuORF;ENST00000568950.5_1_16:718199-721765:+|nuORF;ENST00000602564.5_1_16:719540-721765:+|nuORF;nc|ENSG00000140983|Q8IXI1-2|RHOT2	19.359975847455235	0.6112419832031293	2				NaN	NaN	0	NaN	11409	4756	16166
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16168	42.738	NaN	2819	30	0	568.08	0.106	+			43302	TFTFSHATF	9	64	529.7510399960186	1057.487527058837	2	529.7510375976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TFTFSHATF_	ENSG00000204713|ENST00000377199|TRIM27	58.78195531508484	0.22376836668196862	2				NaN	NaN	0	NaN	11410	4756	16166
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16169	42.74	NaN	917.22	30	0	42.821	0.106	+			8698	EEARLRKLRKK	11	54	713.9504289726029	NaN	0	713.9490356445312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EEARLRKLRKK_	ENSG00000174243|ENST00000308025|DDX23	12.811709888998246	0.456735970842152	2				NaN	NaN	0	NaN	11411	4756	16166
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16170	42.742	NaN	2095.2	30	0	196.05	0.106	+			32423	QVHNLLLTY	9	67	550.8085675530554	1099.6025821729106	2	550.8096923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QVHNLLLTY_	ENSG00000170540|ENST00000304414|ARL6IP1;nc|ENSG00000170540|Q15041-2|ARL6IP1	67.49366992349736	0.1516260258713357	2				NaN	NaN	0	NaN	11412	4756	16166
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16171	42.744	NaN	1561	30	0	463.24	0.106	+			2103	ALGALPALTF	10	51	487.2893671757352	NaN	0	487.28961181640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ALGALPALTF_	ENSG00000177595|ENST00000347755|PIDD1;ENST00000524486.5_1_11:803168-803522:-|nuORF;nc|ENSG00000177595|Q9HB75-2|PIDD1;nc|ENSG00000177595|Q9HB75-3|PIDD1	53.351449002276354	0.2844141321977336	2				NaN	NaN	0	NaN	11413	4756	16166
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16172	42.745	NaN	1105.1	30	0	106.27	0.032				-1	CGSSCCSCCW	10	48	384.77211856578316	NaN	0	384.7724914550781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Carbamidomethyl (C)	_CGSSCCSC(Carbamidomethyl (C))C(Carbamidomethyl (C))W_	ENST00000228741.7_1_12:96588285-96617411:+|nuORF	11.096761811581379	0.4201028297492154	2				NaN	NaN	0	NaN	11414	4756	16166
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16179	42.763	NaN	2961.1	30	0	419.86	0.214	+			44666	TTGLTIPWK	9	63	508.7925174057351	1015.5704818782702	2	508.79248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTGLTIPWK_	ENST00000493259.5_1_7:129940668-129944375:+|nuORF	56.72105179125745	0.24094814563026265	2				NaN	NaN	0	NaN	11418	4759	16178
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16180	42.767	NaN	2854.2	30	0	340.3	0.106	+			49654	VYINTAQEF	9	71	542.7694665787001	1083.5243802242	2	542.7695922851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYINTAQEF_	ENSG00000095059|ENST00000210060|DHPS;ENST00000600510.1_1_19:12786654-12786995:-|nuORF;nc|ENSG00000095059|P49366-3|DHPS	120.8684288430529	0.02067403653475984	2				NaN	NaN	0	NaN	11419	4759	16178
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16181	42.769	NaN	1740.8	30	0	101.5	0.037				-1	YVQYIIMVN	9	61	579.7973061062297	1157.5800592792593	2	579.7970581054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_YVQYIIM(Oxidation (M))VN_	TRPM6|p.F1055Y|1|0.19|ENSG00000119121|chr9:74782407-74782407|A/T|missense_variant	63.30626980617807	0.18605348971131092	2				NaN	NaN	0	NaN	11420	4759	16178
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16187	42.784	NaN	1412.5	30	0	370.27	0.211	+			21093	KKPKKKEKKHK	11	51	703.9655974098182	NaN	0	703.966064453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KKPKKKEKKHK_	ENSG00000065000|ENST00000643116|AP3D1;ENST00000592488.2_1_19:2113067-2114219:-|nuORF;nc|ENSG00000065000|O14617-2|AP3D1;nc|ENSG00000065000|O14617-3|AP3D1;nc|ENSG00000065000|O14617|AP3D1	7.804521658770766	0.456735970842152	2				NaN	NaN	0	NaN	11423	4762	16186
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16188	42.787	NaN	1325	30	0	456.86	0.106				-1	 	0	51	569.3145210880592	568.3072446214592	1	569.31494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11424	4762	16186
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16189	42.789	NaN	1046.4	30	0	121.2	0.106	+			2302	AMELEYVL	8	44	484.24310631804747	966.471659702895	2	484.2426452636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AMELEYVL_	ENSG00000167107|ENST00000300441|ACSF2;nc|ENSG00000167107|Q96CM8-2|ACSF2;nc|ENSG00000167107|Q96CM8-3|ACSF2	20.481830146152948	0.8005983782650069	2				NaN	NaN	0	NaN	11425	4762	16186
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16190	42.791	NaN	2599	30	0	280.31	0.034	+			23430	LADAVVKIV	9	60	464.29744753948944	926.5803421457789	2	464.2959899902344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LADAVVKIV_	ENST00000462646.5_1_1:19923518-19941047:+|nuORF	71.87747018426188	0.13267044672804276	2				NaN	NaN	0	NaN	11426	4762	16186
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16195	42.806	NaN	1593.6	30	0	154.15	0.214	+			49706	VYLPNINKI	9	56	537.321676333513	1072.6287997338259	2	537.3214721679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYLPNINKI_	ENSG00000072422|ENST00000337910|RHOBTB1	44.377184641726394	0.36891676396732553	2				NaN	NaN	0	NaN	11428	4765	16194
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16196	42.809	NaN	692.96	30	0	89.771	0.106	+			44217	TRLLKLRYLIL	11	38	467.98150634765625	NaN	0	467.98150634765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TRLLKLRYLIL_	ENSG00000198836|ENST00000361510|OPA1;ENST00000487986.1_1_3:193332581-193346300:+|nuORF;nc|ENSG00000198836|O60313-11|OPA1;nc|ENSG00000198836|O60313-13|OPA1;nc|ENSG00000198836|O60313-2|OPA1;nc|ENSG00000198836|O60313-9|OPA1;nc|ENSG00000198836|O60313|OPA1	3.61906645146314	0.456735970842152	2				NaN	NaN	0	NaN	11429	4765	16194
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16197	42.811	NaN	1935.9	30	0	155.42	0.106	+			49525	VYAILTHGI	9	64	493.7871886587363	985.5598243842726	2	493.78680419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYAILTHGI_	ENSG00000101911|ENST00000380668|PRPS2;ENSG00000147224|ENST00000372435|PRPS1;ENSG00000229937|ENST00000506618|PRPS1L1;nc|ENSG00000101911|P11908-2|PRPS2;nc|ENSG00000147224|P60891-2|PRPS1;PRPS1|p.T242I|1|0.5|ENSG00000147224|chrX:107647626-107647626|C/T|missense_variant	88.64286706044652	0.06869153472052109	2				NaN	NaN	0	NaN	11430	4765	16194
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16198	42.813	NaN	1211.7	30	0	70.536	0.106	+			15579	GVHAKRGG	8	53	391.2251618309298	780.4357707286596	2	391.22503662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GVHAKRGG_	CALN1|p.Y70Vfs*26|1|0.3|ENSG00000183166|chr7:72106205-72106206|-/C|frameshift_variant	15.63621529709179	0.7929342111279789	2				NaN	NaN	0	NaN	11431	4765	16194
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16199	42.815	NaN	1428.6	30	0	270.81	0.106			+	38326	SRGKGEWGKL	10	57	559.3083683911134	1116.6021838490267	2	559.3084106445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SRGKGEWGKL_	REV__ENST00000562955.2_2_1:43916973-43917366:+|nuORF	29.170058357718403	0.6416167986984785	2				NaN	NaN	0	NaN	11432	4765	16194
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16200	42.816	NaN	1299.3	30	0	151.25	0.106	+			13167	GHLARSTKR	9	50	513.3038330078125	NaN	0	513.3038330078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GHLARSTKR_	ENSG00000123569|ENST00000217926|H2BW1;nc|ENSG00000123569|Q7Z2G1-1|H2BW1;nc|ENSG00000123569|Q7Z2G1|H2BW1	21.9598887501803	0.3626577482100488	2				NaN	NaN	0	NaN	11433	4765	16194
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16201	42.818	NaN	1073.6	30	0	113.5	0.035	+			16701	HKRIHTAE	8	53	496.27719756278196	990.539842192364	2	496.27685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HKRIHTAE_	ENSG00000198521|ENST00000354959|ZNF43;ENSG00000198521|ENST00000354959|ZNF43;nc|ENSG00000198521|P17038-2|ZNF43;nc|ENSG00000198521|P17038-2|ZNF43;ZNF43|p.P481L|1|0.46|ENSG00000198521|chr19:21808595-21808595|G/A|missense_variant;ZNF676|p.A472T|1|0.3|ENSG00000196109|chr19:22180303-22180303|C/T|missense_variant;ZNF678|p.E457A|1|0.25|ENSG00000181450|chr1:227655620-227655620|A/C|missense_variant	42.396135135203025	0.6414440140393314	2				NaN	NaN	0	NaN	11434	4765	16194
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16206	42.833	NaN	3318.7	30	0	413.92	0.214	+			47205	VMAPRTLLL	9	66	507.3126866605471	1012.6108203878943	2	507.31280517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VMAPRTLLL_	ENSG00000206503|ENST00000376809|HLA-A;ENST00000463348.5_1_6:30227401-30227711:+|nuORF;ENST00000495183.5_1_6:29910330-29910808:+|nuORF;ENST00000496081.5_1_6:29910330-29912419:+|nuORF;nc|ENSG00000206503|P04439-2|HLA-A	44.377184641726394	0.36891676396732553	2				NaN	NaN	0	NaN	11436	4768	16205
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16207	42.836	NaN	1780.7	30	0	177.12	0.034			+	-1	SNLNLLKL	8	52	478.792404917862	955.570256902524	2	478.79229736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SNLNLLKL_	REV__tr|U7STF8|U7STF8_FUSNUAmidohydrolase-relateddomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01393PE=4SV=1	56.72105179125745	0.5342425954139568	2				NaN	NaN	0	NaN	11437	4768	16205
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16219	42.884	NaN	3966.7	30	0	1461.5	0.214	+			6637	AYTPFHAVL	9	65	509.77150133883964	1017.5284497444793	2	509.7716369628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AYTPFHAVL_	ENSG00000138614|ENST00000313182|INTS14;nc|ENSG00000138614|Q96SY0-3|INTS14;nc|ENSG00000138614|Q96SY0-4|INTS14	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	11440	4777	16218
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16220	42.888	NaN	2608	30	0	523.54	0.034			+	17416	IASRICRR	8	60	487.78825683276983	973.5619607323397	2	487.7877502441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IASRICRR_	REV__SMTN|p.R29C|1|0.4|ENSG00000183963|chr22:31087998-31087998|C/T|missense_variant	45.9519527083369	0.6193794311207887	2				NaN	NaN	0	NaN	11441	4777	16218
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16225	42.902	NaN	2740.3	30	0	926.88	0.214				-1	 	0	66	534.3124451797614	533.3051687131614	1	534.3125610351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11443	4780	16224
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16226	42.906	NaN	1392.9	30	0	257.54	0.106	+			50352	WVLAAVACTVL	11	51	573.3249118436378	NaN	0	573.3248901367188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WVLAAVACTVL_	ENSG00000166947|ENST00000441366|EPB42;ENST00000567019.1_1_15:43489502-43501706:-|nuORF;EPB42|p.C670Sfs*10|1|0.04|ENSG00000166947|chr15:43197369-43197370|-/TATAAAGG|frameshift_variant;EPB42|p.L487Pfs*13|1|0.39|ENSG00000166947|chr15:43206488-43206489|-/G|frameshift_variant;nc|ENSG00000166947|P16452-2|EPB42;nc|ENSG00000166947|P16452-3|EPB42	27.882242232435846	0.44115667141176046	2				NaN	NaN	0	NaN	11444	4780	16224
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16227	42.908	NaN	1014.9	30	0	172.52	0.106	+			27834	MSTGGDFGN	9	44	443.1749847214538	NaN	0	443.17474365234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MSTGGDFGN_	ENSG00000175582|ENST00000336083|RAB6A;ENST00000541795.1_1_11:73441692-73471680:-|nuORF;nc|ENSG00000175582|P20340-2|RAB6A;nc|ENSG00000175582|P20340-3|RAB6A	31.529811441608018	0.3183796599642538	2				NaN	NaN	0	NaN	11445	4780	16224
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16228	42.91	NaN	841.6	30	0	96.988	0.031			+	28832	NPQIWIAVV	9	38	347.20352207901504	NaN	0	347.2048034667969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NPQIWIAVV_	REV__ENST00000448312.2_1_2:42047360-42047405:+|nuORF	14.864876125193954	0.3866709117995958	2				NaN	NaN	0	NaN	11446	4780	16224
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16232	42.924	NaN	2339.4	30	0	305.2	0.142	+			35354	SAPKIFQAL	9	60	487.78825683276983	973.5619607323397	2	487.7873229980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAPKIFQAL_	ENSG00000064651|ENST00000262461|SLC12A2;nc|ENSG00000064651|P55011-3|SLC12A2;SLC12A2|p.E1119Rfs*7|1|0.47|ENSG00000064651|chr5:128184417-128184418|-/A|frameshift_variant;SLC12A2|p.P1171Sfs*18|1|0.38|ENSG00000064651|chr5:128186498-128186499|-/TC|frameshift_variant	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	11447	4783	16231
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16236	42.94	NaN	1354.4	30	0	181.56	0.214	+			10998	FEGTVEIKR	9	57	539.7984394741991	1077.582326015198	2	539.7987670898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FEGTVEIKR_	BRCA2|p.E3316Rfs*11|1|0.3|ENSG00000139618|chr13:32398452-32398453|-/A|frameshift_variant;BRCA2|p.F1192C|1|0.39|ENSG00000139618|chr13:32337930-32337930|T/G|missense_variant;BRCA2|p.K1691Nfs*15|1|0.11|ENSG00000139618|chr13:32339422-32339422|A/-|frameshift_variant;BRCA2|p.N1544Tfs*24|1|0.22|ENSG00000139618|chr13:32338982-32338982|A/-|frameshift_variant;BRCA2|p.N1642Mfs*2|1|0.08|ENSG00000139618|chr13:32339277-32339277|A/-|frameshift_variant;BRCA2|p.N1784Tfs*7|1|0.4|ENSG00000139618|chr13:32339700-32339700|A/-|frameshift_variant;BRCA2|p.T2515Nfs*24|1|0.35|ENSG00000139618|chr13:32356530-32356531|-/A|frameshift_variant;BRCA2|p.T2685Hfs*9|1|0.05|ENSG00000139618|chr13:32363251-32363251|A/-|frameshift_variant;ENSG00000139618|ENST00000380152|BRCA2	20.94693142431847	0.6074874384046576	2				NaN	NaN	0	NaN	11448	4786	16235
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16237	42.943	NaN	2027.7	30	0	185.1	0.106	+			43521	TGTGILALVEA	11	63	522.800721328565	1043.58688972393	2	523.3023071289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TGTGILALVEA_	ENSG00000128872|ENST00000249700|TMOD2;nc|ENSG00000128872|Q9NZR1-2|TMOD2	35.15202426646627	0.6210751305041943	2				NaN	NaN	0	NaN	11449	4786	16235
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16238	42.945	NaN	849.47	30	0	113.89	0.035			+	16915	HPLPAPPFL	9	39	330.1911984271231	NaN	0	330.1915283203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HPLPAPPFL_	REV__ENSG00000127124|ENST00000372583|HIVEP3;REV__HIVEP3|p.G2228Vfs*5|1|0.27|ENSG00000127124|chr1:41510989-41510989|C/-|frameshift_variant;REV__nc|ENSG00000127124|Q5T1R4-2|HIVEP3	21.9598887501803	0.3626577482100488	2				NaN	NaN	0	NaN	11450	4786	16235
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16242	42.959	NaN	4358.3	30	0	830.5	0.214	+			45372	TVTEVLLKY	9	65	533.3134615054022	1064.6123700776043	2	533.3134155273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVTEVLLKY_	ENSG00000085721|ENST00000198767|RRN3;ENST00000427965.6_1_16:29086353-29124388:+|nuORF;ENST00000551901.5_1_16:21823661-21831677:-|nuORF;ENST00000564580.5_1_16:29086353-29108616:+|nuORF;ENST00000566038.1_1_16:29086353-29102074:+|nuORF;nc|ENSG00000085721|Q9NYV6-2|RRN3;nc|ENSG00000085721|Q9NYV6-3|RRN3;nc|ENSG00000103472|A6NIE6|RRN3P2	72.87924865735499	0.12833875048249987	2				NaN	NaN	0	NaN	11451	4789	16241
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16243	42.963	NaN	2636.3	30	0	163.96	0.035			+	1964	AIWVCLRY	8	64	512.2767971616173	1022.5390413900346	2	512.7772827148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AIWVCLRY_	REV__ENST00000235310.7_1_1:11734653-11734812:-|nuORF	35.200714571348534	0.6875396545722289	2				NaN	NaN	0	NaN	11452	4789	16241
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16247	42.977	NaN	2132.8	30	0	256.05	0.145	+			6758	CEEIKTHLPP	10	56	583.7975462598234	1165.5805395864468	2	583.7973022460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CEEIKTHLPP_	ENSG00000164808|ENST00000297423|SPIDR;ENST00000524141.5_1_8:48173550-48625457:+|nuORF;KIAA0146-ANK1|1|fusion;KIAA0146-ANK1|2|fusion;KIAA0146-ANK1|3|fusion;KIAA0146-ANK1|4|fusion;KIAA0146-ANK1|5|fusion;nc|ENSG00000164808|Q14159-2|SPIDR;nc|ENSG00000164808|Q14159-3|SPIDR	25.57405402267927	0.6709832231498071	2				NaN	NaN	0	NaN	11453	4792	16246
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16252	42.994	NaN	3925.4	30	0	836.65	0.214				-1	 	0	44	336.5341033168387	1006.5804805507162	3	336.53448486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11455	4795	16251
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16253	42.997	NaN	2345.6	30	0	254.2	0.036			+	10407	EVFPGSSQLL	10	60	538.7850446583319	NaN	0	538.7866821289062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EVFPGSSQLL_	REV__ENSG00000198887|ENST00000361138|SMC5;REV__SMC5|p.F947Lfs*40|1|0.1|ENSG00000198887|chr9:70347984-70347984|T/-|frameshift_variant	45.97224482568171	0.33106653400957564	2				NaN	NaN	0	NaN	11456	4795	16251
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16259	43.014	NaN	2869.9	30	0	269.97	0.214	+			6603	AYPHNLMTF	9	64	547.2605410683822	1092.5065292035642	2	547.2605590820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AYPHNLMTF_	ENSG00000067167|ENST00000262213|TRAM1;nc|ENSG00000067167|Q15629-2|TRAM1	42.396135135203025	0.392153681582562	2				NaN	NaN	0	NaN	11459	4798	16258
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16260	43.017	NaN	1171.3	30	0	123.56	0.036	+			2380	ANMKSNPAIQ	10	48	537.2759998219224	NaN	0	537.2764282226562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ANMKSNPAIQ_	ENST00000478827.1_1_13:41367302-41376286:+|nuORF	41.42661286455405	0.3598046802465243	2				NaN	NaN	0	NaN	11460	4798	16258
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16265	43.032	NaN	13705	30	0	5360.9	0.215			+	-1	SGAEHTSL	8	54	422.1947675073865	842.374982081573	2	422.1954650878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SGAEHTSL_	REV__ENSG00000168348|ENST00000307169|INSM2;REV__INSM2|p.F535Lfs*6|3|0.26|ENSG00000168348|chr14:35535851-35535851|T/-|frameshift_variant;REV__INSM2|p.R442H|1|0.25|ENSG00000168348|chr14:35535577-35535577|G/A|missense_variant;REV__INSM2|p.S536*|3|0.3|ENSG00000168348|chr14:35535850-35535851|-/T|frameshift_variant	29.841539824830324	0.7289191502596711	2				NaN	NaN	0	NaN	11462	4801	16264
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16266	43.035	NaN	3122.6	30	0	701.05	0.106			+	-1	GCHVIVVT	8	49	442.73706478821515	NaN	0	442.73681640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GC(Carbamidomethyl (C))HVIVVT_	REV__ENSG00000184155|ENST00000334857|OR10J5	28.2542754592877	1.7418937515398478	2				NaN	NaN	0	NaN	11463	4801	16264
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16267	43.037	NaN	1961.3	30	0	197.81	0.035			+	18110	ILAEKLVSI	9	62	493.3186371676346	984.6227214020693	2	493.3184814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ILAEKLVSI_	REV__tr|U7SJF6|U7SJF6_FUSNUV-typeH+-transportingATPasesubunitCOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02123PE=3SV=1	49.536043120802724	0.308405419312776	2				NaN	NaN	0	NaN	11464	4801	16264
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16271	43.051	NaN	2531.9	30	0	248.7	0.214			+	-1	GYNVSLWEM	9	61	557.7456520988698	NaN	0	557.7457275390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_GYNVSLWEM(Oxidation (M))_	REV__ENSG00000243910|ENST00000490341|TUBA4B	42.396135135203025	0.2590952873412954	2				NaN	NaN	0	NaN	11465	4804	16270
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16272	43.055	NaN	1769	30	0	163.92	0.106			+	26876	LWLGCRIY	8	60	512.2767971616173	1022.5390413900346	2	512.28076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LWLGCRIY_	REV__ENST00000475046.5_1_1:185270368-185270791:-|nuORF	28.2542754592877	0.7411748056684583	2				NaN	NaN	0	NaN	11466	4804	16270
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16273	43.057	NaN	1425.5	30	0	176.63	0.037				-1	MLEVHKTLF	9	56	567.304665237569	1132.594777541938	2	567.3035278320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))LEVHKTLF_	ENSG00000138160|ENST00000260731|KIF11;KIF11|p.K673Rfs*3|1|0.12|ENSG00000138160|chr10:92637397-92637397|A/-|frameshift_variant	51.33545320467046	0.2872990594074956	2				NaN	NaN	0	NaN	11467	4804	16270
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16279	43.073	NaN	1392.9	30	0	134.32	0.214				-1	 	0	56	347.1989377574906	692.3833225817813	2	347.1993408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11470	4807	16278
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16280	43.076	NaN	2752.4	30	0	422.07	0.106			+	43072	TELRLLQEFAA	11	57	645.855356610946	1289.696160288692	2	645.8558959960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TELRLLQEFAA_	REV__ENSG00000205436|ENST00000688303|EXOC3L4;REV__EXOC3L4|p.G702Afs*17|1|0.41|ENSG00000205436|chr14:103110156-103110156|G/-|frameshift_variant	23.52269567125451	0.7430573033454468	2				NaN	NaN	0	NaN	11471	4807	16278
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16281	43.078	NaN	1557.1	30	0	225.48	0.037			+	36582	SFTRTRRTP	9	57	561.3122808369465	NaN	0	561.3121337890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SFTRTRRTP_	REV__ENSG00000153048|ENST00000311052|CARHSP1;REV__ENST00000562586.1_1_16:8953026-8961919:-|nuORF	30.317721548370564	0.32449924987115025	2				NaN	NaN	0	NaN	11472	4807	16278
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16287	43.095	NaN	2268.1	30	0	504.01	0.214	+			2150	ALLGVIIAK	9	46	449.31020939726784	896.6058658613357	2	449.309814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ALLGVIIAK_	ENSG00000113249|ENST00000523175|HAVCR1	97.47269410471826	0.04379738608259218	2				NaN	NaN	0	NaN	11475	4810	16286
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16288	43.098	NaN	2534.7	30	0	311.73	0.106	+			23364	KYVSSVLSF	9	56	515.284353254258	1028.554153575316	2	515.2835083007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KYVSSVLSF_	ENSG00000198862|ENST00000361371|LTN1;nc|ENSG00000198862|O94822-3|LTN1	65.46538089061403	0.16805504838372562	2				NaN	NaN	0	NaN	11476	4810	16286
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16289	43.1	NaN	2867.8	30	0	252.17	0.106	+			45421	TVWCIFVQI	9	65	554.7983864459659	1107.5822199587317	2	554.7981567382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVWCIFVQI_	ENST00000513565.6_1_5:122694091-122724023:-|nuORF	77.31757898189308	0.1091473830098891	2				NaN	NaN	0	NaN	11477	4810	16286
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16290	43.102	NaN	1452	30	0	178.64	0.106	+			41060	SVIGVFITK	9	55	482.2973760644093	962.5801991956187	2	482.29718017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVIGVFITK_	ENSG00000185052|ENST00000328041|SLC24A3;SLC24A3|p.K341Rfs*11|2|0.31|ENSG00000185052|chr20:19684289-19684289|C/-|frameshift_variant	54.722347961057174	0.257609425301511	2				NaN	NaN	0	NaN	11478	4810	16286
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16291	43.104	NaN	1473.6	30	0	160.68	0.036	+			41387	SVMLGAGLLAK	11	63	530.3151262598042	NaN	0	530.3148803710938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVMLGAGLLAK_	ACO1|p.P659Lfs*4|1|0.24|ENSG00000122729|chr9:32434574-32434574|C/-|frameshift_variant;ENSG00000122729|ENST00000309951|ACO1	42.86426827375447	0.36657022113551535	2				NaN	NaN	0	NaN	11479	4810	16286
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16295	43.118	NaN	6978.4	30	0	752.83	0.214	+			5968	AVLLVFANK	9	60	487.8052866815895	973.596020429979	2	487.80474853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVLLVFANK_	ENSG00000004059|ENST00000000233|ARF5;ENSG00000134287|ENST00000256682|ARF3;ENSG00000143761|ENST00000272102|ARF1;ENST00000406466.2_1_7:94463564-94463681:+|nuORF;ENST00000444561.2_1_17:43710417-43713807:+|nuORF;ENST00000463733.5_1_7:127230086-127231350:+|nuORF;ENST00000470670.5_1_1:228284963-228285711:+|nuORF;nc|ENSG00000134287|P61204-2|ARF3	176.41073772950895	0.0016726359177844747	2				NaN	NaN	0	NaN	11480	4813	16294
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16296	43.121	NaN	2359.1	30	0	424	0.034	+			23226	KYGPVFTI	8	42	462.76322484673585	923.5118967602717	2	462.762939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KYGPVFTI_	ENSG00000167600|ENST00000310054|CYP2S1;nc|ENSG00000167600|Q96SQ9-2|CYP2S1	45.9519527083369	0.6193794311207887	2				NaN	NaN	0	NaN	11481	4813	16294
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16309	43.158	NaN	1825.4	30	0	268.1	0.144				-1	RASARCWTP	9	48	552.76953125	NaN	0	552.76953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_RASARC(Carbamidomethyl (C))WTP_	DNAAF2|p.R134Afs*45|1|0.71|ENSG00000165506|chr14:49634751-49634751|C/-|frameshift_variant	29.170058357718403	0.3302935627494407	2				NaN	NaN	0	NaN	11488	4819	16308
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16313	43.174	NaN	1356.3	30	0	41.873	0.14			+	32767	RARAGGPP	8	56	391.22510135480456	780.4356497764092	2	391.22515869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RARAGGPP_	REV__ENSG00000196872|ENST00000397899|CRACDL	21.70233525837049	0.7917639344264583	2				NaN	NaN	0	NaN	11489	4822	16312
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16318	43.191	NaN	1135.3	30	0	91.917	0.143	+			10858	FATTNQISL	9	46	497.7639248057371	993.5132966782742	2	497.7638244628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FATTNQISL_	ENSG00000149600|ENST00000278980|COMMD7;ENST00000610160.1_1_20:31291624-31315937:-|nuORF;nc|ENSG00000149600|Q86VX2-2|COMMD7	31.634271133179894	0.507608568980346	2				NaN	NaN	0	NaN	11491	4825	16317
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16323	43.207	NaN	2443	30	0	285.28	0.145	+			2545	AQAQEVFFLK	10	67	590.8218938257306	1179.6292347182612	2	591.3247680664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AQAQEVFFLK_	ENSG00000170248|ENST00000307296|PDCD6IP;ENST00000459659.1_1_3:33863478-33868168:+|nuORF;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP;nc|ENSG00000170248|Q8WUM4-3|PDCD6IP;PDCD6IP|p.F351Nfs*37|1|0.08|ENSG00000170248|chr3:33836259-33836260|-/AATCC|frameshift_variant	50.033510581677724	0.4566913063131936	2				NaN	NaN	0	NaN	11493	4828	16322
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16338	43.273	NaN	3133.1	30	0	307.18	0.214	+			51604	YYQSSVQYL	9	60	575.7746811648432	1149.5348093964863	2	575.7747192382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YYQSSVQYL_	ENSG00000164818|ENST00000297440|DNAAF5;nc|ENSG00000164818|Q86Y56-2|DNAAF5;nc|ENSG00000164818|Q86Y56-3|DNAAF5	96.0336014099291	0.047854655524928534	2				NaN	NaN	0	NaN	11496	4840	16337
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16339	43.276	NaN	2405.5	30	0	445.34	0.033			+	21735	KQLNVAVL	8	54	442.781642129855	883.54873132651	2	442.7820129394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KQLNVAVL_	REV__ENST00000407472.5_1_22:19839540-19839579:-|nuORF	44.53106598305862	0.628196326904373	2				NaN	NaN	0	NaN	11497	4840	16337
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16346	43.307	NaN	3335.1	30	0	432.47	0.144	+			51571	YYKNIGLGF	9	64	537.7852703808779	1073.5559878285558	2	537.784912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YYKNIGLGF_	ENSG00000142534|ENST00000270625|RPS11;ENST00000599167.5_1_19:49999677-50000690:+|nuORF;ENST00000600027.5_1_19:49999677-50000944:+|nuORF	63.30626980617807	0.18605348971131092	2				NaN	NaN	0	NaN	11498	4846	16345
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16351	43.323	NaN	1020.2	30	0	81.789	0.14			+	-1	CCCDDEHD	8	51	384.7720585064432	NaN	0	384.7713317871094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term),3 Carbamidomethyl (C)	_(Acetyl (Protein N-term))C(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))DDEHD_	REV__ENSG00000198854|ENST00000368775|C1orf68	3.6843469609004	1.7418937515398478	2				NaN	NaN	0	NaN	11500	4849	16350
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16355	43.339	NaN	4005.8	30	0	906.91	0.214				-1	 	0	47	336.5341033168387	1006.5804805507162	3	336.5342712402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11501	4852	16354
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16356	43.343	NaN	855.52	30	0	76.078	0.035				-1	 	0	56	499.2744986836007	498.2672222170007	1	499.2742004394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11502	4852	16354
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16360	43.357	NaN	3374.2	30	0	370.59	0.214			+	36543	SFIRCYTF	8	67	547.2605410683822	1092.5065292035642	2	547.2606811523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SFIRC(Carbamidomethyl (C))YTF_	REV__ENST00000497966.1_1_9:14683712-14690382:-|nuORF	53.351449002276354	0.5676011784961348	2				NaN	NaN	0	NaN	11503	4855	16359
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16361	43.361	NaN	3669	30	0	398.5	0.039	+			10642	EYPDRIMNTF	10	76	643.2975688688285	1284.580584804457	2	643.2982788085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EYPDRIMNTF_	ENSG00000137267|ENST00000333628|TUBB2A;ENSG00000137285|ENST00000259818|TUBB2B;ENSG00000188229|ENST00000340384|TUBB4B;ENSG00000196230|ENST00000327892|TUBB;ENSG00000258947|ENST00000315491|TUBB3;ENST00000518096.1_1_8:30209523-30210210:+|nuORF;ENST00000604929.1_1_9:140136931-140138005:+|nuORF;nc|ENSG00000258947|Q13509-2|TUBB3;TUBB2B|p.D177Hfs*21|1|0.32|ENSG00000137285|chr6:3225559-3225560|TC/-|frameshift_variant;TUBB2B|p.S168N|1|0.15|ENSG00000137285|chr6:3225586-3225586|C/T|missense_variant	45.02220120713402	0.5028680121232791	2				NaN	NaN	0	NaN	11504	4855	16359
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16367	43.377	NaN	2410.1	30	0	643.43	0.141			+	9571	ELGPDGGGAA	10	43	422.1947675073865	842.374982081573	2	422.1953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ELGPDGGGAA_	REV__ENST00000523094.5_2_5:157285974-157286100:-|nuORF	21.9598887501803	0.7004979571547932	2				NaN	NaN	0	NaN	11507	4858	16366
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16371	43.393	NaN	5034.8	30	0	660.92	0.144	+			6038	AVMGAYVLLK	10	64	532.8124286139753	1063.6103042947504	2	532.812744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVMGAYVLLK_	ENSG00000166562|ENST00000587834|SEC11C;ENST00000591406.1_1_18:56822908-56825914:+|nuORF	119.55681237560556	0.02795567171318017	2				NaN	NaN	0	NaN	11508	4861	16370
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16376	43.409	NaN	1602.5	30	0	290.12	0.214			+	41275	SVLKVPLLA	9	45	470.3152383013471	NaN	0	470.3150939941406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVLKVPLLA_	REV__ENST00000469163.1_1_22:45574133-45574268:+|nuORF	30.503639358989545	0.3235605894931338	2				NaN	NaN	0	NaN	11510	4864	16375
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16377	43.413	NaN	1486.1	30	0	181.76	0.036			+	44834	TTSVPKVYY	9	51	529.2820930139119	NaN	0	529.2822875976562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTSVPKVYY_	REV__ENSG00000095261|ENST00000210313|PSMD5;REV__nc|ENSG00000095261|Q16401-2|PSMD5	24.20275056022122	0.35506675290109213	2				NaN	NaN	0	NaN	11511	4864	16375
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16386	43.444	NaN	1340.9	30	0	120.83	0.142			+	20802	KIDLPIFN	8	55	480.28304633028705	NaN	0	480.2832336425781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KIDLPIFN_	REV__ENSG00000121988|ENST00000264159|ZRANB3;REV__ENST00000403017.2_1_2:135957914-136028945:-|nuORF;REV__nc|ENSG00000121988|Q5FWF4-2|ZRANB3;REV__nc|ENSG00000121988|Q5FWF4-3|ZRANB3;REV__nc|ENSG00000121988|Q5FWF4-4|ZRANB3	40.77816245573522	1.7418937515398478	2				NaN	NaN	0	NaN	11514	4870	16385
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16397	43.493	NaN	1078.8	30	0	114.07	0.144	+			26867	LWDPSRRR	8	55	543.3012900257364	NaN	0	543.3005981445312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LWDPSRRR_	ZBTB7C|p.P321Lfs*18|4|0.42|ENSG00000184828|chr18:48040148-48040148|C/-|frameshift_variant	24.519189625965996	1.7418937515398478	2				NaN	NaN	0	NaN	11516	4879	16396
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16402	43.51	NaN	1561.6	30	0	109.72	0.214				-1	 	0	50	333.20123222861326	664.3879115240265	2	333.2012634277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11518	4882	16401
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16403	43.513	NaN	1590.7	30	0	138.47	0.106	+			1362	AEVFIVKM	8	49	468.7646338561239	935.5147147790478	2	468.76458740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEVFIVKM_	ENSG00000119707|ENST00000261973|RBM25	60.97194046774394	0.49215940876911696	2				NaN	NaN	0	NaN	11519	4882	16401
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16404	43.515	NaN	1677	30	0	306.31	0.106	+			5913	AVLDLSWNK	9	56	523.2877778457577	1044.5610027583152	2	523.2881469726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVLDLSWNK_	ENSG00000136045|ENST00000412830|PWP1	51.19269402634007	0.2889735674168909	2				NaN	NaN	0	NaN	11520	4882	16401
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16405	43.517	NaN	1991	30	0	237.56	0.106	+			5731	AVFQQLFQK	9	56	554.8114013671875	NaN	0	554.8114013671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVFQQLFQK_	ENSG00000127831|ENST00000248444|VIL1;nc|ENSG00000127831|P09327-2|VIL1	28.081489160057373	0.33578952234132536	2				NaN	NaN	0	NaN	11521	4882	16401
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16406	43.519	NaN	1529.9	30	0	230.54	0.035			+	-1	NQKKCLMI	8	51	517.7795512075966	NaN	0	517.7799682617188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_NQKKC(Carbamidomethyl (C))LMI_	REV__ENST00000394885.7_1_15:77224801-77227968:+|nuORF	37.028477286268924	1.7418937515398478	2				NaN	NaN	0	NaN	11522	4882	16401
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16410	43.533	NaN	4971.9	30	0	410.37	0.214	+			47953	VSMLNVYLK	9	66	533.8021628617794	1065.5897727903587	2	533.8025512695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSMLNVYLK_	ENSG00000111775|ENST00000229379|COX6A1;ENST00000550009.1_1_12:120875908-120876378:+|nuORF	112.41091882917199	0.026537921851008135	2				NaN	NaN	0	NaN	11523	4885	16409
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16411	43.537	NaN	2549.2	30	0	233.74	0.036	+			51110	YLYLFLGTT	9	64	545.7939000879516	NaN	0	545.7941284179688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YLYLFLGTT_	OR6T1|p.F105L|1|0.08|ENSG00000181499|chr11:123943524-123943524|G/T|missense_variant	40.5726180659479	0.27166212580479165	2				NaN	NaN	0	NaN	11524	4885	16409
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16418	43.566	NaN	1207.8	30	0	84.263	0.14	+			29618	PGAGARPR	8	55	391.22512190401903	780.4356908748381	2	391.2247314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PGAGARPR_	ENSG00000119688|ENST00000356924|ABCD4;ENST00000477803.5_1_14:74764631-74769615:-|nuORF;ENST00000489207.1_1_14:74766721-74769615:-|nuORF;ENST00000493752.5_1_14:74766202-74769615:-|nuORF;ENST00000557554.5_1_14:74757154-74769615:-|nuORF	20.481830146152948	0.8005983782650069	2				NaN	NaN	0	NaN	11525	4891	16417
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16422	43.582	NaN	2593.8	30	0	289.77	0.145	+			19109	IYKSIMEQF	9	65	579.796949698763	1157.579346464326	2	579.7968139648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IYKSIMEQF_	ENSG00000128298|ENST00000381669|BAIAP2L2;nc|ENSG00000128298|Q6UXY1-2|BAIAP2L2	46.45678178249821	0.34452392205506005	2				NaN	NaN	0	NaN	11526	4894	16421
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16430	43.615	NaN	4031.3	30	0	355.54	0.214	+			23286	KYLSVQGQLF	10	73	591.8296253055998	1181.6446976779996	2	591.8297729492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KYLSVQGQLF_	ENSG00000137409|ENST00000373627|MTCH1;ENST00000471737.1_1_6:36936681-36938521:-|nuORF;nc|ENSG00000137409|Q9NZJ7-2|MTCH1;nc|ENSG00000137409|Q9NZJ7-3|MTCH1	70.41160668669231	0.27395730963879994	2				NaN	NaN	0	NaN	11528	4900	16429
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16431	43.618	NaN	2638.9	30	0	313.85	0.036	+			253	AAMLDTVVFK	10	63	547.799245792796	1093.583938652392	2	548.3020629882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAMLDTVVFK_	ENSG00000115233|ENST00000409682|PSMD14;ENST00000477232.5_1_2:162241962-162267908:+|nuORF;ENST00000492908.1_1_2:162265323-162267908:+|nuORF	35.15202426646627	0.5927656479315102	2				NaN	NaN	0	NaN	11529	4900	16429
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16436	43.633	NaN	10797	30	0	1533.6	0.214				-1	 	0	77	338.1933879930585	674.372223052917	2	338.1934814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11531	4903	16435
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16437	43.636	NaN	2050	30	0	885.28	0.031				-1	 	0	40	346.706423295846	691.398293658492	2	346.7069091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11532	4903	16435
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16445	43.667	NaN	1437.6	30	0	134.09	0.14				-1	SCLCCCCCGS	10	45	384.7721186015064	NaN	0	384.77191162109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	3 Carbamidomethyl (C)	_SCLC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))CCGS_	CD2AP-MDFI|1|fusion;ENSG00000112559|ENST00000230321|MDFI	4.0829091318959865	0.4201028297492154	2				NaN	NaN	0	NaN	11534	4909	16444
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16450	43.684	NaN	2117.6	30	0	278.8	0.213			+	50208	WMATDLKNTM	10	58	613.7781092831717	NaN	0	613.777099609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_WMATDLKNTM(Oxidation (M))_	REV__ENSG00000109133|ENST00000504986|TMEM33	42.86426827375447	0.3507156137006061	2				NaN	NaN	0	NaN	11536	4912	16449
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16451	43.687	NaN	2161.8	30	0	471.89	0.036	+			50718	YEGLYKAFQ	9	58	559.7790016049473	NaN	0	559.77880859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YEGLYKAFQ_	ENSG00000156050|ENST00000286544|FAM161B;FAM161B|p.N537Efs*5|1|0.35|ENSG00000156050|chr14:73938094-73938095|-/T|frameshift_variant;nc|ENSG00000156050|Q96MY7-2|FAM161B	34.172542307311794	0.30503706118289736	2				NaN	NaN	0	NaN	11537	4912	16449
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16455	43.701	NaN	820.97	30	0	77.106	0.137			+	23652	LARPWPGG	8	54	285.16206967400115	NaN	0	285.162109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LARPWPGG_	REV__ENST00000524270.5_1_12:6981776-6982483:-|nuORF	7.690282842768113	1.7418937515398478	2				NaN	NaN	0	NaN	11538	4915	16454
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16460	43.718	NaN	484.03	30	0	121.96	0.214				-1	 	0	36	241.13573072308657	NaN	0	241.1356201171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11540	4918	16459
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16461	43.721	NaN	1333.7	30	0	142.78	0.106	+			42105	SYKNGFLNL	9	55	528.2799359265075	1054.545318919815	2	528.2802124023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SYKNGFLNL_	ENSG00000130985|ENST00000335972|UBA1;nc|ENSG00000130985|P22314-2|UBA1	45.02220120713402	0.3613509778819777	2				NaN	NaN	0	NaN	11541	4918	16459
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16462	43.723	NaN	2026.7	30	0	267.4	0.106	+			14282	GSVLLFVTK	9	48	482.29722266076453	962.5798923883291	2	482.29730224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GSVLLFVTK_	ENSG00000198231|ENST00000389924|DDX42;ENST00000578593.1_1_17:61889231-61895755:+|nuORF;nc|ENSG00000198231|Q86XP3-2|DDX42	82.7504851949679	0.08565546331141553	2				NaN	NaN	0	NaN	11542	4918	16459
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16463	43.725	NaN	1702.3	30	0	220.6	0.106			+	2373	ANFQYMKEI	9	59	572.2795005126547	1142.5444480921094	2	572.2800903320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ANFQYMKEI_	REV__ENSG00000254685|ENST00000370898|FPGT;REV__nc|ENSG00000254685|O14772|FPGT	62.107414245175825	0.1960472003779324	2				NaN	NaN	0	NaN	11543	4918	16459
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16464	43.727	NaN	1292.3	30	0	140.49	0.032				-1	 	0	45	383.74678358155916	NaN	0	383.746826171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11544	4918	16459
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16468	43.741	NaN	1259.3	30	0	304.71	0.214	+			13522	GLQLLANAVI	10	45	506.3133691229081	1010.6121853126162	2	506.3136291503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GLQLLANAVI_	ENSG00000121281|ENST00000673801|ADCY7	29.170058357718403	0.6416167986984785	2				NaN	NaN	0	NaN	11545	4921	16467
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16469	43.745	NaN	2122.8	30	0	304.15	0.106	+			11789	FSPFHASVL	9	58	502.7636692622829	1003.5127855913659	2	502.763427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FSPFHASVL_	ENSG00000112357|ENST00000318471|PEX7	51.19269402634007	0.2889735674168909	2				NaN	NaN	0	NaN	11546	4921	16467
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16470	43.746	NaN	1559.9	30	0	236.79	0.106	+			12655	GEIKVLQGF	9	52	495.784476839058	989.554400744916	2	495.7846984863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEIKVLQGF_	ENSG00000047932|ENST00000368498|GOPC;nc|ENSG00000047932|Q9HD26-2|GOPC	78.26377905018397	0.10505600812668463	2				NaN	NaN	0	NaN	11547	4921	16467
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16471	43.748	NaN	1723.6	30	0	220.89	0.106			+	13916	GRLLQLEPL	9	53	519.81940870316	NaN	0	519.8194580078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GRLLQLEPL_	REV__ENSG00000006555|ENST00000371276|TTC22	29.170058357718403	0.3302935627494407	2				NaN	NaN	0	NaN	11548	4921	16467
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16472	43.75	NaN	2012.8	30	0	165.98	0.035			+	24956	LLALETPVAG	10	53	492.2923450394403	982.5701371456806	2	492.29278564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LLALETPVAG_	REV__ENSG00000139291|ENST00000266673|TMEM19;REV__nc|ENSG00000139291|Q96HH6-2|TMEM19	53.351449002276354	0.42630798468005626	2				NaN	NaN	0	NaN	11549	4921	16467
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16482	43.783	NaN	2618.4	30	0	248.74	0.214	+			5996	AVLYQPLFDK	10	54	597.3322141894721	1192.649875445744	2	597.3324584960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVLYQPLFDK_	ENSG00000187109|ENST00000618691|NAP1L1;ENST00000549988.5_1_12:76453547-76478450:-|nuORF;ENST00000550917.1_1_12:32879649-32880297:-|nuORF;nc|ENSG00000187109|P55209-2|NAP1L1;nc|ENSG00000187109|P55209-3|NAP1L1	68.84614121027924	0.2867470276772903	2				NaN	NaN	0	NaN	11553	4927	16481
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16483	43.786	NaN	2005.3	30	0	625.4	0.106	+			27837	MSVKRPDVL	9	52	522.795779731458	1043.5770065297158	2	522.7962036132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MSVKRPDVL_	ENSG00000049759|ENST00000400345|NEDD4L;nc|ENSG00000049759|Q96PU5-2|NEDD4L;nc|ENSG00000049759|Q96PU5-3|NEDD4L;nc|ENSG00000049759|Q96PU5-4|NEDD4L;nc|ENSG00000049759|Q96PU5-5|NEDD4L;nc|ENSG00000049759|Q96PU5-6|NEDD4L;nc|ENSG00000049759|Q96PU5-7|NEDD4L;nc|ENSG00000049759|Q96PU5-9|NEDD4L	32.81241826257853	0.4965981579233955	2				NaN	NaN	0	NaN	11554	4927	16481
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16484	43.788	NaN	1516.3	30	0	283.4	0.036			+	36172	SELHDVMVAL	10	48	557.2833712881379	NaN	0	557.2821655273438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SELHDVMVAL_	REV__CKAP5|p.V1971Lfs*42|1|0.03|ENSG00000175216|chr11:46744211-46744212|-/TTGAAAAAAAG|frameshift_variant;REV__ENSG00000175216|ENST00000529230|CKAP5;REV__nc|ENSG00000175216|Q14008-2|CKAP5;REV__nc|ENSG00000175216|Q14008-3|CKAP5	37.15910966729921	0.3781637092648983	2				NaN	NaN	0	NaN	11555	4927	16481
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16488	43.802	NaN	2324.4	30	0	456.63	0.143			+	-1	MSISTIQKI	9	55	518.7879654202862	1035.5613779073724	2	518.7881469726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))SISTIQKI_	REV__ENST00000438503.1_1_2:149627595-149627934:-|nuORF	51.33545320467046	0.2872990594074956	2				NaN	NaN	0	NaN	11556	4930	16487
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16495	43.835	NaN	2781.3	30	0	378.91	0.214	+			36541	SFINLPTAL	9	52	488.2792302495956	974.5439075659913	2	488.2789611816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SFINLPTAL_	ENSG00000136250|ENST00000617537|AOAH;nc|ENSG00000136250|P28039-2|AOAH	37.81151784470057	0.4459294069877048	2				NaN	NaN	0	NaN	11557	4936	16494
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16496	43.838	NaN	2309.8	30	0	276.04	0.036	+			19131	IYNASATSVF	10	61	536.7690998020819	1071.5236466709637	2	536.7687377929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IYNASATSVF_	ENSG00000127980|ENST00000248633|PEX1;ENST00000484913.5_1_7:92116773-92148321:-|nuORF;PEX1|p.R636Gfs*9|1|0.3|ENSG00000127980|chr7:92504897-92504897|T/-|frameshift_variant	60.11826168202944	0.36476464221954025	2				NaN	NaN	0	NaN	11558	4936	16494
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16502	43.854	NaN	1363	30	0	97.209	0.138				-1	 	0	45	333.20123222861326	664.3879115240265	2	333.2013244628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11561	4939	16501
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16510	43.876	NaN	2443.4	30	0	621.32	0.214	+			19751	KDVLSVAF	8	50	439.75286026117095	877.4911675891419	2	439.7525939941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KDVLSVAF_	ENSG00000204628|ENST00000512805|RACK1;ENST00000502548.5_1_5:180666387-180669331:-|nuORF;ENST00000502890.5_1_5:180667315-180668686:-|nuORF;ENST00000505461.5_1_5:180668319-180670896:-|nuORF;ENST00000507261.1_1_5:180668485-180669312:-|nuORF;ENST00000508963.1_1_5:180668485-180670896:-|nuORF;ENST00000514183.5_1_5:180665952-180670713:-|nuORF	76.7741389293348	0.3504530765139327	2				NaN	NaN	0	NaN	11566	4942	16509
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16511	43.879	NaN	1889.9	30	0	147.6	0.035	+			47206	VMAPRTLLL	9	55	507.3122375344221	1012.6099221356442	2	507.3122863769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VMAPRTLLL_	ENSG00000206503|ENST00000376809|HLA-A;ENST00000463348.5_1_6:30227401-30227711:+|nuORF;ENST00000495183.5_1_6:29910330-29910808:+|nuORF;ENST00000496081.5_1_6:29910330-29912419:+|nuORF;nc|ENSG00000206503|P04439-2|HLA-A	58.22992032128504	0.22837015374068087	2				NaN	NaN	0	NaN	11567	4942	16509
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16518	43.91	NaN	1619.9	30	0	72.029	0.214			+	376	AARRPPGG	8	58	391.22512190401903	780.4356908748381	2	391.22491455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AARRPPGG_	REV__ENST00000409001.5_1_2:182756891-182760783:+|nuORF	20.481830146152948	0.8005983782650069	2				NaN	NaN	0	NaN	11568	4948	16517
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16519	43.914	NaN	2704.4	30	0	777.74	0.037				-1	VILDRRLMQ	9	64	580.3352929357579	1158.6560329383158	2	580.3348388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_VILDRRLM(Oxidation (M))Q_	ENSG00000196547|ENST00000559717|MAN2A2;ENST00000560880.1_1_15:91459336-91461657:+|nuORF;nc|ENSG00000196547|P49641-1|MAN2A2	34.172542307311794	0.4838870758800184	2				NaN	NaN	0	NaN	11569	4948	16517
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16528	43.946	NaN	53243	30	0	5997.5	0.214				-1	 	0	115	316.1802921087494	630.3460312842989	2	316.1802978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11572	4954	16527
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16529	43.95	NaN	1742.2	30	0	150.89	0.106				-1	NVKVGDIIK	9	58	514.3112450598093	1026.6079371864184	2	514.31103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))NVKVGDIIK_	ATP8B4|p.E139K|1|0.1|ENSG00000104043|chr15:50010865-50010865|C/T|missense_variant;ATP8B4|p.F281Lfs*4|1|0.41|ENSG00000104043|chr15:49979808-49979808|A/-|frameshift_variant;ENSG00000104043|ENST00000284509|ATP8B4;ENST00000558906.5_1_15:50152393-50311102:-|nuORF;ENST00000558959.5_1_15:50271874-50336868:-|nuORF;ENST00000559726.5_1_15:50152393-50311102:-|nuORF	52.936696900407355	0.27249468807391813	2				NaN	NaN	0	NaN	11573	4954	16527
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16530	43.952	NaN	1549.4	30	0	414.79	0.034				-1	SRKESMGF	8	41	479.22684403173116	NaN	0	479.2273254394531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_SRKESM(Oxidation (M))GF_	CEP295|p.L2479Ffs*6|1|0.29|ENSG00000166004|chr11:93729651-93729651|A/-|frameshift_variant;ENSG00000166004|ENST00000325212|CEP295;nc|ENSG00000166004|Q9C0D2-2|CEP295;nc|ENSG00000166004|Q9C0D2-3|CEP295;nc|ENSG00000166004|Q9C0D2-4|CEP295	28.2542754592877	1.7418937515398478	2				NaN	NaN	0	NaN	11574	4954	16527
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16535	43.966	NaN	1674	30	0	258.65	0.214	+			40991	SVGPGGAGVVQ	11	49	464.2493740766847	NaN	0	464.29718017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVGPGGAGVVQ_	ENST00000529721.5_1_11:75201351-75201700:-|nuORF	44.377184641726394	0.3557038908013712	2				NaN	NaN	0	NaN	11576	4957	16534
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16536	43.97	NaN	1564.8	30	0	148.28	0.106	+			50748	YEKILVAL	8	50	474.7919300913218	947.5693072494436	2	474.79156494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YEKILVAL_	ENSG00000135046|ENST00000257497|ANXA1;ENST00000491192.1_1_9:75783887-75785020:+|nuORF	47.657333605630114	0.6087971902037268	2				NaN	NaN	0	NaN	11577	4957	16534
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16537	43.972	NaN	1364.2	30	0	93.419	0.106				-1	 	0	52	348.64185911138003	695.2691652895601	2	348.6419677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11578	4957	16534
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16538	43.973	NaN	1887.3	30	0	421.55	0.036	+			51436	YVCHVSNEF	9	55	549.2401123046875	NaN	0	549.2401123046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YVCHVSNEF_	ENSG00000143217|ENST00000368012|NECTIN4;nc|ENSG00000143217|Q96NY8-2|NECTIN4	40.77816245573522	0.2702456086868081	2				NaN	NaN	0	NaN	11579	4957	16534
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16542	43.987	NaN	13177	30	0	11024	0.214				-1	 	0	61	324.6935592056529	647.3725654781058	2	324.6936340332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11580	4960	16541
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16543	43.991	NaN	3094	30	0	181.26	0.106				-1	 	0	52	338.1933879930585	674.372223052917	2	338.1934814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11581	4960	16541
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16544	43.993	NaN	1220.2	30	0	72.691	0.03				-1	 	0	42	340.6386370906716	679.2627212481432	2	340.63897705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11582	4960	16541
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16550	44.009	NaN	4232.7	30	0	743.97	0.214				-1	 	0	50	336.5341033168387	1006.5804805507162	3	336.5342102050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11585	4963	16549
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16551	44.013	NaN	5007.1	30	0	649.77	0.106	+			45576	TYMKDLYQL	9	78	587.7945207941285	1173.574488655057	2	587.794189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TYMKDLYQL_	ENSG00000146376|ENST00000368149|ARHGAP18;nc|ENSG00000146376|Q8N392-2|ARHGAP18	88.17693792209575	0.07000514020414955	2				NaN	NaN	0	NaN	11586	4963	16549
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16552	44.014	NaN	3003.9	30	0	360.93	0.038	+			49725	VYNENLVHMI	10	66	616.3112827859635	1230.608012638727	2	616.3108520507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYNENLVHMI_	ENSG00000116752|ENST00000369541|BCAS2;ENST00000425064.1_1_1:100858662-100858893:-|nuORF	42.86426827375447	0.522752283233888	2				NaN	NaN	0	NaN	11587	4963	16549
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16556	44.029	NaN	866.61	30	0	116.99	0.14				-1	 	0	27	397.10522132577665	792.1958897183533	2	397.10498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11588	4966	16555
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16566	44.065	NaN	1155.5	30	0	132.6	0.143			+	-1	LCALLSTLV	9	49	495.28738722257174	988.5602215119435	2	495.2871398925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_LC(Carbamidomethyl (C))ALLSTLV_	REV__ENSG00000138166|ENST00000369583|DUSP5	47.91560031466742	0.327412564698279	2				NaN	NaN	0	NaN	11592	4972	16565
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16573	44.097	NaN	2722.9	30	0	365.77	0.144	+			8606	ECKVKDIIK	9	65	538.3134765625	NaN	0	538.3134765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ECKVKDIIK_	tr|U7T1S2|U7T1S2_FUSNUFlavinreductaselikedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00555PE=3SV=1	49.536043120802724	0.20989033510253738	2				NaN	NaN	0	NaN	11593	4978	16572
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16582	44.131	NaN	1901.1	30	0	293.33	0.145	+			2586	AQFLESFLQ	9	55	541.7798025353434	1081.5450521374867	2	541.7803955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AQFLESFLQ_	ENSG00000130997|ENST00000511885|POLN;ENST00000503601.1_1_4:2083186-2091962:-|nuORF;ENST00000514858.5_1_4:2082849-2194957:-|nuORF	51.19269402634007	0.2889735674168909	2				NaN	NaN	0	NaN	11596	4984	16581
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16589	44.164	NaN	2249.9	30	0	436.09	0.144	+			32655	RAAHGIPDLA	10	55	510.78122133371653	1019.5478897342331	2	510.7821960449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RAAHGIPDLA_	ENSG00000165171|ENST00000297873|METTL27	42.396135135203025	0.5270658956260207	2				NaN	NaN	0	NaN	11597	4990	16588
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16599	44.211	NaN	4976.4	30	0	456.75	0.145	+			49125	VVLRDGRAKL	10	65	563.8565673828125	NaN	0	563.8565673828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVLRDGRAKL_	ALOX5|p.M383Ifs*19|1|0.12|ENSG00000012779|chr10:45440597-45440597|G/-|frameshift_variant;ENSG00000012779|ENST00000374391|ALOX5;nc|ENSG00000012779|P09917-2|ALOX5;nc|ENSG00000012779|P09917-3|ALOX5;nc|ENSG00000012779|P09917-4|ALOX5;nc|ENSG00000012779|P09917-5|ALOX5	52.936696900407355	0.28703625529470256	2				NaN	NaN	0	NaN	11598	4999	16598
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16607	44.243	NaN	1575.8	30	0	292.24	0.144	+			10897	FDAAKNLVW	9	45	532.2827536065955	1062.550954279991	2	532.2840576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FDAAKNLVW_	ENSG00000133863|ENST00000643185|TEX15;nc|ENSG00000133863|Q9BXT5|TEX15;TEX15|p.K1907Nfs*14|1|0.11|ENSG00000133863|chr8:30843297-30843297|T/-|frameshift_variant;TEX15|p.S2464Vfs*33|1|0.4|ENSG00000133863|chr8:30837745-30837745|T/-|frameshift_variant	26.79610172149135	0.5528238334041078	2				NaN	NaN	0	NaN	11600	5005	16606
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16611	44.259	NaN	2084.3	30	0	80.845	0.214			+	13175	GHRLKGGG	8	57	391.22512190401903	780.4356908748381	2	391.2250671386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GHRLKGGG_	REV__ENST00000416860.2_2_1:2486170-2486278:-|nuORF	21.70233525837049	0.7917639344264583	2				NaN	NaN	0	NaN	11601	5008	16610
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16612	44.263	NaN	1614	30	0	236.23	0.035	+			46189	VDWLTEKM	8	61	511.2546739775895	1020.494795021979	2	511.2542419433594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VDWLTEKM_	ENSG00000141543|ENST00000649764|EIF4A3;ENSG00000156976|ENST00000323963|EIF4A2;ENSG00000161960|ENST00000293831|EIF4A1;ENST00000429589.5_1_3:186502413-186505273:+|nuORF;ENST00000468362.5_1_3:186503755-186505556:+|nuORF;ENST00000475653.5_1_3:186502413-186505086:+|nuORF;ENST00000492144.5_1_3:186503809-186505672:+|nuORF;ENST00000497177.1_1_3:186504924-186505672:+|nuORF;ENST00000575978.1_1_17:78111144-78112096:-|nuORF;ENST00000578324.5_1_17:7477602-7481249:+|nuORF;ENST00000581544.5_1_17:7477924-7481249:+|nuORF;ENST00000581621.1_1_17:7476159-7481249:+|nuORF;nc|ENSG00000156976|Q14240-2|EIF4A2;nc|ENSG00000161960|P60842-2|EIF4A1	74.25504064058377	0.37144338840759816	2				NaN	NaN	0	NaN	11602	5008	16610
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16621	44.293	NaN	2360.3	30	0	368.4	0.143	+			36327	SESPVWVKL	9	58	522.7906167188075	NaN	0	522.7897338867188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SESPVWVKL_	ENSG00000144426|ENST00000683969|NBEAL1;NBEAL1|p.F1670Lfs*25|1|0.21|ENSG00000144426|chr2:203144843-203144843|T/-|frameshift_variant;NBEAL1|p.F2315Lfs*2|1|0.17|ENSG00000144426|chr2:203193900-203193900|T/-|frameshift_variant;NBEAL1|p.K2562Rfs*15|1|0.41|ENSG00000144426|chr2:203209306-203209306|A/-|frameshift_variant;NBEAL1|p.N2072Kfs*10|1|0.35|ENSG00000144426|chr2:203172825-203172826|-/A|frameshift_variant;nc|ENSG00000144426|Q6ZS30-1|NBEAL1;nc|ENSG00000144426|Q6ZS30|NBEAL1	56.72105179125745	0.16330365735109603	2				NaN	NaN	0	NaN	11605	5014	16620
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16625	44.309	NaN	2180.6	30	0	258.9	0.214	+			14932	GTMEWIMIK	9	64	562.777411032323	1123.540269131446	2	562.7781982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_GTMEWIM(Oxidation (M))IK_	ENSG00000168273|ENST00000477703|UQCC5	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	11606	5017	16624
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16626	44.313	NaN	859.34	30	0	177.62	0.037	+			25618	LQPGSFLTALT	11	36	383.2175227084187	NaN	0	383.21759033203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LQPGSFLTALT_	ENSG00000124203|ENST00000371030|ZNF831	24.231819034082204	0.456735970842152	2				NaN	NaN	0	NaN	11607	5017	16624
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16633	44.343	NaN	4459.5	30	0	595.54	0.144			+	-1	QATTLTMKL	9	65	524.7890767802115	1047.563600627223	2	524.7890014648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))QATTLTMKL_	REV__VEPH1|p.T738Hfs*27|1|0.26|ENSG00000197415|chr3:157265579-157265579|T/-|frameshift_variant	64.20726635412375	0.17854274437659667	2				NaN	NaN	0	NaN	11608	5023	16632
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16638	44.359	NaN	4503.1	30	0	776.34	0.214				-1	 	0	56	336.5341033168387	1006.5804805507162	3	336.5343322753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11610	5026	16637
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16639	44.363	NaN	2815.3	30	0	444.88	0.036	+			42133	SYMGHFDLL	9	60	549.7497843079652	1097.4850156827304	2	549.7498168945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_SYM(Oxidation (M))GHFDLL_	ENSG00000169976|ENST00000367569|SF3B5	55.50420428727701	0.2510918378945873	2				NaN	NaN	0	NaN	11611	5026	16637
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16643	44.377	NaN	4788.5	30	0	468.5	0.143	+			4611	ATLLIFANK	9	65	495.8028157231803	989.5910785131606	2	495.8022766113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATLLIFANK_	ENSG00000213465|ENST00000246747|ARL2	139.97047562133406	0.010493916756945389	2				NaN	NaN	0	NaN	11612	5029	16642
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16647	44.393	NaN	1896.4	30	0	155.13	0.214	+			797	AEFNRIMSL	9	58	540.7798020449511	NaN	0	540.7793579101562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEFNRIMSL_	ENSG00000130402|ENST00000252699|ACTN4;ENST00000497637.5_1_19:39218501-39220069:+|nuORF;nc|ENSG00000130402|O43707-2|ACTN4;nc|ENSG00000130402|O43707-3|ACTN4	56.43379154798735	0.16452882468284893	2				NaN	NaN	0	NaN	11613	5032	16646
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16648	44.397	NaN	1079.2	30	0	78.092	0.032			+	-1	WCCSCCSSGC	10	48	384.7719222640471	NaN	0	384.771728515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_WC(Carbamidomethyl (C))C(Carbamidomethyl (C))SCCSSGC_	REV__ENST00000228741.7_1_12:96588285-96617411:+|nuORF	2.027967841256958	0.4201028297492154	2				NaN	NaN	0	NaN	11614	5032	16646
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16663	44.459	NaN	1366.7	30	0	113.77	0.214	+			44190	TRAQIPPTN	9	48	499.2746896813748	NaN	0	499.2749328613281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TRAQIPPTN_	ENST00000542587.5_3_19:19738235-19738667:-|nuORF	26.69291269510374	0.34280015626154364	2				NaN	NaN	0	NaN	11617	5044	16662
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16664	44.462	NaN	2440.9	30	0	544.15	0.106	+			49912	VYTTTVHWL	9	60	560.2956010629272	1118.5766491926543	2	560.2964477539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYTTTVHWL_	ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1670Tfs*23|1|0.29|ENSG00000174231|chr17:1659487-1659487|C/-|frameshift_variant	55.50420428727701	0.2510918378945873	2				NaN	NaN	0	NaN	11618	5044	16662
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16665	44.464	NaN	2499.1	30	0	396.03	0.036				-1	MITSAAVAGIH	11	65	543.7863159179688	NaN	0	543.7863159179688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))ITSAAVAGIH_	TMEM170B|p.Y97H|1|0.2|ENSG00000205269|chr6:11575451-11575451|T/C|missense_variant	42.396135135203025	0.3699325281549567	2				NaN	NaN	0	NaN	11619	5044	16662
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16675	44.51	NaN	1894.8	30	0	141.06	0.143	+			10739	FAEGFVRAL	9	51	505.2769687586228	1008.5393845840456	2	505.2770080566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FAEGFVRAL_	ENSG00000177606|ENST00000371222|JUN;JUN|p.R257Kfs*53|1|0.31|ENSG00000177606|chr1:58782301-58782302|-/T|frameshift_variant	79.71258880314673	0.09879134589249085	2				NaN	NaN	0	NaN	11620	5053	16674
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16680	44.526	NaN	2642.8	30	0	775.75	0.214				-1	AYVHMVTHF	9	43	374.1793371352652	1119.5161820059957	3	374.17950439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_AYVHM(Oxidation (M))VTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	35.61828744233558	0.47037581924408073	2				NaN	NaN	0	NaN	11622	5056	16679
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16681	44.53	NaN	1469	30	0	288.82	0.034			+	8667	EDTERVLA	8	40	466.73724969295375	931.4599464527075	2	466.7371826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EDTERVLA_	REV__ENSG00000206181|ENST00000332567|ELOA2	34.172542307311794	0.6954784234644539	2				NaN	NaN	0	NaN	11623	5056	16679
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16699	44.607	NaN	2136.3	30	0	92.541	0.14	+			15580	GVHAKRGG	8	63	391.22512190401903	780.4356908748381	2	391.22491455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVHAKRGG_	CALN1|p.Y70Vfs*26|1|0.3|ENSG00000183166|chr7:72106205-72106206|-/C|frameshift_variant	28.2542754592877	0.7411748056684583	2				NaN	NaN	0	NaN	11626	5071	16698
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16703	44.624	NaN	1496.6	30	0	307.16	0.14				-1	WFCCCCCCCC	10	48	411.75970093918227	NaN	0	411.75958251953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_WFC(Carbamidomethyl (C))CCCCCCC_	ENST00000606389.5_1_2:69691306-69691378:-|nuORF	2.027967841256958	0.4201028297492154	2				NaN	NaN	0	NaN	11627	5074	16702
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16711	44.656	NaN	133050	30	0	74001	0.214				-1	 	0	50	217.11826798507082	NaN	0	217.11831665039062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11629	5080	16710
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16712	44.659	NaN	2906.1	30	0	449.55	0.106			+	-1	QSEVMKQWL	9	55	582.7897418310472	1163.5649307288943	2	582.7899169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_QSEVM(Oxidation (M))KQWL_	REV__ENSG00000154370|ENST00000284551|TRIM11;REV__nc|ENSG00000154370|Q96F44-2|TRIM11	24.20275056022122	0.577060078256802	2				NaN	NaN	0	NaN	11630	5080	16710
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16713	44.661	NaN	2973.8	30	0	347.16	0.035			+	24782	LIFFIIAPS	9	56	510.8079655451939	NaN	0	510.808349609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LIFFIIAPS_	REV__ENSG00000196517|ENST00000372310|SLC6A9;REV__nc|ENSG00000196517|P48067-3|SLC6A9;REV__nc|ENSG00000196517|P48067|SLC6A9	50.0245360154114	0.20652386741182333	2				NaN	NaN	0	NaN	11631	5080	16710
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16717	44.675	NaN	2100.7	30	0	361.89	0.214	+			2039	AKREETKAM	9	52	532.2827536065955	1062.550954279991	2	532.2828369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AKREETKAM_	ENSG00000144228|ENST00000280098|SPOPL	20.94693142431847	0.6074874384046576	2				NaN	NaN	0	NaN	11632	5083	16716
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16718	44.679	NaN	2100.9	30	0	305.43	0.035			+	-1	SKSMRLSAI	9	66	504.7802734375	NaN	0	504.7802734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_SKSM(Oxidation (M))RLSAI_	REV__nc|ENSG00000135423|Q9UI32-2|GLS2	32.81241826257853	0.3119040447479903	2				NaN	NaN	0	NaN	11633	5083	16716
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16726	44.709	NaN	4285.7	30	0	848.68	0.143				-1	 	0	45	336.5341033168387	1006.5804805507162	3	336.53436279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11635	5089	16725
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16732	44.727	NaN	1872.5	30	0	232.9	0.214			+	31169	QGLAEQKRR	9	53	543.3136909142439	1084.6128288952877	2	543.3129272460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QGLAEQKRR_	REV__ENSG00000124593|ENST00000335515|unknown;REV__ENSG00000278224|ENST00000458694|PRICKLE4;REV__nc|ENSG00000278224|Q2TBC4-2|PRICKLE4;REV__nc|ENSG00000278224|Q2TBC4|PRICKLE4;REV__PRICKLE4|p.G186Dfs*53|1|0.53|ENSG00000278224|chr6:41786218-41786218|G/-|frameshift_variant	26.69291269510374	0.5537881896960711	2				NaN	NaN	0	NaN	11638	5092	16731
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16733	44.731	NaN	1633.6	30	0	143.05	0.035	+			4612	ATLLIFANK	9	55	495.8028157231803	989.5910785131606	2	495.8028259277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATLLIFANK_	ENSG00000213465|ENST00000246747|ARL2	93.19546047674547	0.05585629608842056	2				NaN	NaN	0	NaN	11639	5092	16731
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16738	44.746	NaN	2252.9	30	0	260.32	0.214	+			36250	SENAIVWKI	9	60	530.2954670971803	1058.5763812611606	2	530.2957763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SENAIVWKI_	AP2M1|p.I386Hfs*6|1|0.17|ENSG00000161203|chr3:184182844-184182845|-/C|frameshift_variant;ENSG00000161203|ENST00000292807|AP2M1;ENST00000461733.5_1_3:183898306-183901401:+|nuORF;nc|ENSG00000161203|Q96CW1-2|AP2M1	65.46538089061403	0.16805504838372562	2				NaN	NaN	0	NaN	11641	5095	16737
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16739	44.749	NaN	1537.9	30	0	211.8	0.035	+			11622	FPYLLGTVL	9	51	511.79852294921875	NaN	0	511.79852294921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FPYLLGTVL_	ENST00000267812.3_1_15:44096947-44097118:-|nuORF	25.450171626174864	0.34907449758287085	2				NaN	NaN	0	NaN	11642	5095	16737
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16759	44.829	NaN	1086.6	30	0	84.209	0.138				-1	 	0	52	328.7043414014687	655.3941298697374	2	328.7044372558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11647	5110	16758
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16767	44.862	NaN	1600.8	30	0	144.31	0.144	+			28313	NEFPEPIKL	9	57	543.7954820135548	1085.5764110939094	2	543.796630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NEFPEPIKL_	ENSG00000075785|ENST00000265062|RAB7A	33.921630207806714	0.48623198279849766	2				NaN	NaN	0	NaN	11649	5116	16766
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16771	44.878	NaN	2510.6	30	0	452.07	0.145				-1	FSNHLKCSQ	9	48	374.1795303691113	NaN	0	374.1795654296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_FSNHLKC(Carbamidomethyl (C))SQ_	LRP1B|p.C1218F|1|0.21|ENSG00000168702|chr2:140903033-140903033|C/A|missense_variant	32.81241826257853	0.3119040447479903	2				NaN	NaN	0	NaN	11650	5119	16770
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16775	44.894	NaN	2267.5	30	0	541.76	0.144			+	29854	PLDHLFSEPG	10	59	556.2745650823337	1110.5345772314672	2	556.7777099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PLDHLFSEPG_	REV__ENSG00000198198|ENST00000634258|SZT2;REV__nc|ENSG00000198198|Q5T011-5|SZT2;REV__SZT2|p.L1644Ffs*4|1|0.36|ENSG00000198198|chr1:43431727-43431728|-/T|frameshift_variant;REV__SZT2|p.P2844Rfs*9|1|0.34|ENSG00000198198|chr1:43443669-43443669|C/-|frameshift_variant;REV__SZT2|p.R3241Afs*11|1|0.33|ENSG00000198198|chr1:43448401-43448401|G/-|frameshift_variant	28.081489160057373	0.6505064946289502	2				NaN	NaN	0	NaN	11651	5122	16774
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16785	44.942	NaN	1934.8	30	0	288	0.143	+			42766	TDVKFRTF	8	57	507.27436607112327	1012.5341792090466	2	507.2742004394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TDVKFRTF_	tr|U7T0F4|U7T0F4_FUSNUFeSclusterassemblyscaffoldproteinNifUOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00796PE=3SV=1	40.5726180659479	0.6527593143185008	2				NaN	NaN	0	NaN	11652	5131	16784
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16790	44.958	NaN	3376.3	30	0	221.25	0.214				-1	 	0	58	338.19339551562587	674.3722380980518	2	338.1935119628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11654	5134	16789
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16791	44.962	NaN	1535.5	30	0	63.757	0.032	+			15581	GVHAKRGG	8	55	391.22517293271375	780.4357929322275	2	391.2252197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GVHAKRGG_	CALN1|p.Y70Vfs*26|1|0.3|ENSG00000183166|chr7:72106205-72106206|-/C|frameshift_variant	23.036711822280957	0.7814608874307191	2				NaN	NaN	0	NaN	11655	5134	16789
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16796	44.977	NaN	1841.9	30	0	300.85	0.144	+			27388	MKLKCIFGF	9	57	543.7954820135548	1085.5764110939094	2	543.79541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MKLKCIFGF_	ENST00000484396.1_1_20:24988400-24990223:-|nuORF	38.80614096846853	0.43426287593479557	2				NaN	NaN	0	NaN	11657	5137	16795
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16804	45.009	NaN	1647.2	30	0	933.53	0.139				-1	 	0	39	346.7065709973423	691.3985890614846	2	346.7065734863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11659	5143	16803
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16808	45.025	NaN	2466.5	30	0	239.7	0.214	+			50144	WIVARRAFQ	9	66	573.8299676495783	1145.6453823659565	2	573.8292236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WIVARRAFQ_	ENST00000480109.2_1_1:66820498-66820537:+|nuORF	24.20275056022122	0.577060078256802	2				NaN	NaN	0	NaN	11660	5146	16807
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16809	45.029	NaN	2112.3	30	0	338.36	0.036	+			5878	AVIVWSFMK	9	64	548.7967558004524	1095.5789586677047	2	548.796142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_AVIVWSFM(Oxidation (M))K_	ENST00000514133.1_1_4:52895917-52895998:-|nuORF	79.71258880314673	0.09879134589249085	2				NaN	NaN	0	NaN	11661	5146	16807
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16814	45.043	NaN	3211	30	0	506.15	0.145			+	42039	SWINVKPGYAK	11	69	631.8477172851562	NaN	0	631.8477172851562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SWINVKPGYAK_	REV__PAK2|p.D425N|1|0.11|ENSG00000180370|chr3:196820490-196820490|G/A|missense_variant	28.081489160057373	0.4402687122534875	2				NaN	NaN	0	NaN	11663	5149	16813
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16822	45.076	NaN	3721.3	30	0	413.39	0.214				-1	 	0	62	360.20647136942927	718.3983898056586	2	360.2066650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11665	5155	16821
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16823	45.08	NaN	2492	30	0	316.78	0.106	+			46809	VIAFGSAHLY	10	57	539.2902276144631	1076.5659022957261	2	539.2894897460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VIAFGSAHLY_	ENSG00000197121|ENST00000354764|PGAP1;nc|ENSG00000197121|Q75T13-2|PGAP1	31.954861631926434	0.6188749698950511	2				NaN	NaN	0	NaN	11666	5155	16821
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16824	45.082	NaN	2276.2	30	0	188.01	0.035	+			1672	AGSAAALLPLC	11	54	493.7707786428418	985.5270043524836	2	493.770751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AGSAAALLPLC_	ENST00000491929.1_1_13:103452763-103457688:+|nuORF	60.97194046774394	0.3147792151722205	2				NaN	NaN	0	NaN	11667	5155	16821
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16838	45.143	NaN	9871.4	30	0	6231	0.139				-1	 	0	64	368.7197592207872	735.4249655083744	2	368.7198181152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11669	5167	16837
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16842	45.16	NaN	1973.6	30	0	285.7	0.142			+	-1	CLPPPATEA	9	46	478.2313232421875	NaN	0	478.2313232421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_C(Carbamidomethyl (C))LPPPATEA_	REV__ENSG00000151136|ENST00000280758|ABTB3;REV__nc|ENSG00000151136|A6QL63-3|ABTB3;REV__nc|ENSG00000151136|A6QL63-5|ABTB3	42.47446043378293	0.25855550551448697	2				NaN	NaN	0	NaN	11670	5170	16841
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16847	45.176	NaN	402.34	30	0	68.397	0.136	+			31378	QKGGILDG	8	34	263.1488060294378	NaN	0	263.14892578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QKGGILDG_	CON__P50448	20.481830146152948	1.741893751539848	2				NaN	NaN	0	NaN	11672	5173	16846
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16857	45.223	NaN	4571.2	30	0	488.81	0.214	+			2097	ALFLTLTTK	9	63	504.3103605041893	1006.6061680751786	2	504.30914306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ALFLTLTTK_	ENSG00000198712|ENST00000361739|MT-CO2	66.42927471994793	0.16001998865088202	2				NaN	NaN	0	NaN	11673	5182	16856
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16858	45.227	NaN	2288.5	30	0	653.4	0.035			+	7391	DEDARTAMA	9	45	490.20995425243035	NaN	0	490.21014404296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DEDARTAMA_	REV__ENSG00000069399|ENST00000164227|BCL3;REV__ENST00000403534.7_1_19:45250964-45261799:+|nuORF	21.9598887501803	0.3626577482100488	2				NaN	NaN	0	NaN	11674	5182	16856
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16862	45.241	NaN	2884	30	0	534.68	0.144			+	29394	PAQLPSEPSW	10	55	556.2745650823337	1110.5345772314672	2	556.2747192382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PAQLPSEPSW_	REV__ENSG00000130309|ENST00000252599|COLGALT1	20.83715455343099	0.7096666582730032	2				NaN	NaN	0	NaN	11675	5185	16861
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16876	45.305	NaN	7504.7	30	0	498.73	0.138				-1	 	0	79	338.1933621210128	674.3721713088256	2	338.1934509277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11677	5197	16875
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16883	45.336	NaN	2134.7	30	0	335.7	0.145	+			8985	EFPSRNKLF	9	53	569.30712890625	NaN	0	569.30712890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EFPSRNKLF_	ENSG00000168724|ENST00000648817|DNAJC21;ENST00000509626.1_1_5:34954007-34954816:+|nuORF;nc|ENSG00000168724|Q5F1R6-2|DNAJC21;nc|ENSG00000168724|Q5F1R6-3|DNAJC21	31.529811441608018	0.3183796599642538	2				NaN	NaN	0	NaN	11678	5203	16882
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16887	45.353	NaN	713.46	30	0	79.518	0.147			+	-1	CPCACGGE	8	29	427.13548772578747	NaN	0	427.135498046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))PC(Carbamidomethyl (C))ACGGE_	REV__SCRIB|p.A803Pfs*121|1|0.21|ENSG00000180900|chr8:143805375-143805375|C/-|frameshift_variant	5.08689130490037	1.7418937515398478	2				NaN	NaN	0	NaN	11679	5206	16886
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16891	45.369	NaN	1700.8	30	0	233.04	0.142			+	49459	VVWILQVA	8	45	464.2843695175917	NaN	0	464.2840270996094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVWILQVA_	REV__ENSG00000149262|ENST00000534064|INTS4;REV__ENST00000433818.6_1_11:77629258-77692594:-|nuORF;REV__INTS4|p.R249H|1|0.05|ENSG00000149262|chr11:77958797-77958797|C/T|missense_variant;REV__nc|ENSG00000149262|Q96HW7-2|INTS4;REV__nc|ENSG00000149262|Q96HW7-3|INTS4	57.452649787351945	1.7418937515398478	2				NaN	NaN	0	NaN	11680	5209	16890
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16906	45.434	NaN	1063.2	30	0	73.824	0.214	+			30358	PVEALPVG	8	42	391.22528352590905	NaN	0	391.2255859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PVEALPVG_	ENSG00000115112|ENST00000263707|TFCP2L1;TFCP2L1|p.Q427Sfs*18|1|0.32|ENSG00000115112|chr2:121231888-121231888|G/-|frameshift_variant	23.036711822280957	1.7418937515398478	2				NaN	NaN	0	NaN	11683	5221	16905
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16907	45.438	NaN	1659.8	30	0	267.03	0.106			+	-1	ALLFKMVVV	9	53	518.3171377982538	NaN	0	518.3162231445312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_ALLFKM(Oxidation (M))VVV_	REV__ENSG00000150403|ENST00000434316|TMCO3;REV__ENST00000460039.5_1_13:114200091-114203850:+|nuORF;REV__ENST00000491166.1_1_13:114201574-114203850:+|nuORF	25.450171626174864	0.34907449758287085	2				NaN	NaN	0	NaN	11684	5221	16905
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16908	45.44	NaN	437.54	30	0	157	0.028				-1	 	0	29	241.1357241038612	480.25689527452244	2	241.1358642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11685	5221	16905
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16920	45.487	NaN	1568.6	30	0	119.36	0.214				-1	 	0	54	360.20647136942927	718.3983898056586	2	360.2064514160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11688	5230	16919
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16921	45.49	NaN	2272	30	0	195.81	0.036				-1	LYCGKTLLF	9	62	557.8020824647033	1113.5896119962065	2	557.80224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LYC(Carbamidomethyl (C))GKTLLF_	ENSG00000050130|ENST00000616435|JKAMP;nc|ENSG00000050130|Q9P055-3|JKAMP;nc|ENSG00000050130|Q9P055-5|JKAMP	44.377184641726394	0.36891676396732553	2				NaN	NaN	0	NaN	11689	5230	16919
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16925	45.505	NaN	14741	30	0	13030	0.214				-1	 	0	46	346.70664481019526	691.3987366871905	2	346.7067565917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11690	5233	16924
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16926	45.508	NaN	1157	30	0	78.23	0.029				-1	 	0	47	285.16193871180496	568.30932449041	2	285.1619567871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11691	5233	16924
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16930	45.522	NaN	2980.8	30	0	270.26	0.137				-1	 	0	60	294.1671008590215	586.319648784843	2	294.16741943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11692	5236	16929
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16934	45.538	NaN	1311.9	30	0	145.14	0.214				-1	 	0	62	263.1488219668827	524.2830910005654	2	263.14886474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11693	5239	16933
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16935	45.542	NaN	2068.5	30	0	133.19	0.106				-1	 	0	57	350.1724065285696	698.3302601239392	2	350.1725769042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11694	5239	16933
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16936	45.544	NaN	1412.7	30	0	149.24	0.106				-1	 	0	49	219.1226179034351	436.2306828736702	2	219.1226806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11695	5239	16933
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16937	45.545	NaN	9341.3	30	0	925.89	0.03				-1	 	0	93	316.18020234371704	630.3458517542341	2	316.18011474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11696	5239	16933
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16942	45.559	NaN	1290.9	30	0	92.264	0.214				-1	 	0	57	307.17507622364525	612.3355995140905	2	307.175048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11698	5242	16941
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16943	45.563	NaN	2838.2	30	0	638.71	0.036	+			14888	GTLSGWILSK	10	69	531.3044560066922	1060.5943590801844	2	531.3056030273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTLSGWILSK_	CANX|p.D436*|1|0.11|ENSG00000127022|chr5:179722918-179722919|-/T|frameshift_variant;ENSG00000127022|ENST00000247461|CANX;nc|ENSG00000127022|P27824-2|CANX	98.58198989935565	0.0819402597096128	2				NaN	NaN	0	NaN	11699	5242	16941
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16949	45.578	NaN	3479	30	0	277.99	0.214			+	16597	HGGLVGSA	8	69	349.18486626121336	696.3551795892267	2	349.1851806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HGGLVGSA_	REV__FLVCR1|p.P67H|1|0.27|ENSG00000162769|chr1:212858652-212858652|C/A|missense_variant	23.036711822280957	0.7814608874307191	2				NaN	NaN	0	NaN	11702	5245	16948
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16950	45.582	NaN	254.12	30	0	109.03	0.026				-1	 	0	15	197.1096189434276	NaN	0	197.10971069335938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11703	5245	16948
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16966	45.645	NaN	274700	30	0	32097	0.139				-1	 	0	104	338.1933621210128	674.3721713088256	2	338.1935119628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11707	5257	16965
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16967	45.648	NaN	1296.3	30	0	326.94	0.031			+	-1	GSVCGSGT	8	38	362.6519399867372	NaN	0	362.6520080566406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GSVC(Carbamidomethyl (C))GSGT_	REV__ENSG00000221916|ENST00000408991|C19orf73	18.324413293986947	1.7418937515398478	2				NaN	NaN	0	NaN	11708	5257	16965
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16971	45.662	NaN	3222.9	30	0	790.27	0.144	+			28789	NPFIEVKKS	9	62	531.3044560066922	1060.5943590801844	2	531.304931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NPFIEVKKS_	tr|U7STI3|U7STI3_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01068PE=4SV=1	58.78195531508484	0.22376836668196862	2				NaN	NaN	0	NaN	11709	5260	16970
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16975	45.678	NaN	2387	30	0	230.71	0.214	+			23223	KYGPVFSF	8	50	472.7474945864863	943.4804362397726	2	472.74761962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KYGPVFSF_	CYP51A1|p.L333Wfs*13|1|0.15|ENSG00000001630|chr7:92123208-92123208|A/-|frameshift_variant;ENSG00000001630|ENST00000003100|CYP51A1	63.30626980617807	0.4690498839812213	2				NaN	NaN	0	NaN	11710	5263	16974
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16976	45.682	NaN	1830.3	30	0	243.17	0.106	+			49264	VVPHNFMY	8	52	503.7457923053578	NaN	0	503.746826171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVPHNFMY_	ENSG00000198178|ENST00000360345|CLEC4C	21.70233525837049	1.7418937515398478	2				NaN	NaN	0	NaN	11711	5263	16974
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16977	45.684	NaN	2242.9	30	0	341.76	0.106	+			50265	WRAQLPLP	8	45	490.78754578351356	979.5605386338272	2	490.78839111328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_WRAQLPLP_	ENST00000483563.5_1_9:140500169-140508085:+|nuORF	21.70233525837049	0.7917639344264583	2				NaN	NaN	0	NaN	11712	5263	16974
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16978	45.685	NaN	1460	30	0	333.58	0.032				-1	CGSSCCSCCW	10	42	384.77201869066374	NaN	0	384.7716064453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_CGSSC(Carbamidomethyl (C))CSC(Carbamidomethyl (C))CW_	ENST00000228741.7_1_12:96588285-96617411:+|nuORF	11.096761811581379	0.4201028297492154	2				NaN	NaN	0	NaN	11713	5263	16974
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16985	45.715	NaN	85399	30	0	14066	0.138				-1	 	0	77	318.19594958652556	634.3773462398511	2	318.1959228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11714	5269	16984
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16990	45.732	NaN	2032.1	30	0	524.57	0.146				-1	QALACELCGR	10	44	374.179579952538	1119.516910457814	3	374.1798095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_QALACELC(Carbamidomethyl (C))GR_	ENSG00000071994|ENST00000541970|PDCD2;ENST00000544336.5_2_6:170892694-170893702:-|nuORF;nc|ENSG00000071994|Q16342-4|PDCD2	27.047317107675042	0.6589519614906109	2				NaN	NaN	0	NaN	11716	5272	16989
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	16994	45.748	NaN	12667	30	0	10353	0.138				-1	 	0	48	326.7092435969771	651.4039342607542	2	326.70928955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11717	5275	16993
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17004	45.784	NaN	1447.9	30	0	138.87	0.214	+			29459	PCPAAAGGG	9	46	350.65746250837515	699.3003720835503	2	350.6573791503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PCPAAAGGG_	ENSG00000047932|ENST00000368498|GOPC;nc|ENSG00000047932|Q9HD26-2|GOPC;nc|ENSG00000047932|Q9HD26-3|GOPC	14.664097394203935	0.6112419832031292	2				NaN	NaN	0	NaN	11721	5281	17003
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17005	45.788	NaN	1383	30	0	104.53	0.03	+			45424	TVWRLVPD	8	54	329.187275020168	NaN	0	329.18707275390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVWRLVPD_	ENST00000447818.2_1_X:79828255-79829731:-|nuORF	20.481830146152948	1.741893751539848	2				NaN	NaN	0	NaN	11722	5281	17003
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17010	45.802	NaN	1707.4	30	0	201.33	0.214				-1	 	0	46	342.6544149864797	NaN	0	342.65435791015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11724	5284	17009
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17011	45.806	NaN	711.6	30	0	161.37	0.028				-1	 	0	42	241.1357241038612	480.25689527452244	2	241.13589477539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11725	5284	17009
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17024	45.853	NaN	2578.4	30	0	1849.2	0.139				-1	 	0	36	346.70664481019526	691.3987366871905	2	346.7066955566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11729	5293	17023
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17037	45.916	NaN	1415.3	30	0	219.71	0.144			+	44249	TRYVTAIVF	9	45	535.3064609830124	1068.5983690328246	2	535.3065185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TRYVTAIVF_	REV__ENSG00000135312|ENST00000369947|HTR1B	40.77816245573522	0.41113185337114944	2				NaN	NaN	0	NaN	11730	5305	17036
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17041	45.932	NaN	2868.7	30	0	289.82	0.144	+			49591	VYGFMMLVL	9	63	536.7827376343826	1071.550922335565	2	536.7822875976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYGFMMLVL_	ENSG00000077147|ENST00000371142|TM9SF3	55.50420428727701	0.2510918378945873	2				NaN	NaN	0	NaN	11731	5308	17040
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17045	45.948	NaN	1229.7	30	0	83.053	0.139				-1	 	0	51	360.7080383300781	NaN	0	360.7080383300781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11732	5311	17044
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17052	45.98	NaN	6679.9	30	0	582.73	0.138				-1	 	0	73	338.1933621210128	674.3721713088256	2	338.19354248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11733	5317	17051
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17063	46.028	NaN	3491.3	30	0	753.96	0.214			+	28540	NIMVSVTNVN	10	62	545.7819048132474	1089.5492566932946	2	545.7822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NIMVSVTNVN_	REV__ENSG00000075223|ENST00000265361|SEMA3C;REV__ENST00000458729.5_1_7:80422797-80546000:-|nuORF;REV__nc|ENSG00000075223|Q99985-2|SEMA3C	39.252832667884924	0.5560298534376815	2				NaN	NaN	0	NaN	11735	5326	17062
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17064	46.032	NaN	2721.8	30	0	506.19	0.106			+	29445	PCKNLAPV	8	36	421.2342630725039	840.4539732118078	2	421.2339172363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PCKNLAPV_	REV__ENSG00000005483|ENST00000311117|KMT2E;REV__KMT2E|p.K873Nfs*8|4|0.41|ENSG00000005483|chr7:105106538-105106538|A/-|frameshift_variant;REV__KMT2E|p.L1610Cfs*16|1|0.09|ENSG00000005483|chr7:105112580-105112580|T/-|frameshift_variant;REV__KMT2E|p.R802Kfs*8|1|0.35|ENSG00000005483|chr7:105105640-105105641|-/A|frameshift_variant;REV__nc|ENSG00000005483|Q8IZD2-2|KMT2E;REV__nc|ENSG00000005483|Q8IZD2-4|KMT2E;REV__nc|ENSG00000005483|Q8IZD2-5|KMT2E;REV__nc|ENSG00000005483|Q8IZD2-6|KMT2E;REV__nc|ENSG00000005483|Q8IZD2-7|KMT2E;REV__nc|ENSG00000005483|Q8IZD2-8|KMT2E	21.70233525837049	0.7917639344264583	2				NaN	NaN	0	NaN	11736	5326	17062
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17065	46.034	NaN	2320.6	30	0	356.68	0.035			+	24695	LHDLPVTLL	9	53	510.8080810840977	NaN	0	510.80780029296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LHDLPVTLL_	REV__ENSG00000135763|ENST00000258243|URB2	38.80614096846853	0.28164298475537564	2				NaN	NaN	0	NaN	11737	5326	17062
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17069	46.048	NaN	1558.8	30	0	470.29	0.141	+			8050	DVDASDDY	8	43	450.1668281750534	898.3191034169068	2	450.1662902832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DVDASDDY_	ENSG00000164946|ENST00000380880|FREM1;FREM1|p.S1085Afs*5|1|0.39|ENSG00000164946|chr9:14806682-14806682|T/-|frameshift_variant;FREM1|p.S839Lfs*8|1|0.23|ENSG00000164946|chr9:14819265-14819265|A/-|frameshift_variant;FREM1|p.T1560Qfs*46|1|0.35|ENSG00000164946|chr9:14775969-14775969|C/-|frameshift_variant	19.359975847455235	0.7988239741663654	2				NaN	NaN	0	NaN	11738	5329	17068
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17081	46.096	NaN	2270.3	30	0	416.97	0.144	+			28681	NLWYKNLK	8	46	539.8061665563671	1077.597780179534	2	539.8060913085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NLWYKNLK_	ENST00000432358.1_1_6:158703326-158703404:+|nuORF	29.14955571784316	0.7342621283720113	2				NaN	NaN	0	NaN	11741	5338	17080
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17119	46.285	NaN	3977	30	0	841.06	0.214				-1	 	0	46	336.5341033168387	1006.5804805507162	3	336.53436279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11743	5374	17118
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17120	46.289	NaN	1337.2	30	0	104.57	0.031				-1	 	0	49	377.2274716028387	752.4403902724774	2	377.22784423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11744	5374	17118
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17131	46.335	NaN	2220	30	0	139.29	0.138				-1	 	0	54	338.1933621210128	674.3721713088256	2	338.1934814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11746	5383	17130
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17138	46.366	NaN	2336.1	30	0	389.51	0.214				-1	MTCTHAALK	9	44	516.7509721888983	NaN	0	516.7520141601562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_MTC(Carbamidomethyl (C))THAALK_	AQR|p.K1234Sfs*17|1|0.35|ENSG00000021776|chr15:34870819-34870819|T/-|frameshift_variant;ENSG00000021776|ENST00000156471|AQR;ENST00000543879.6_1_15:35166876-35196659:-|nuORF	23.04248740728303	0.3589936788096251	2				NaN	NaN	0	NaN	11747	5389	17137
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17139	46.37	NaN	3015.2	30	0	429.08	0.036			+	51421	YTVLAPCHL	9	62	537.2763823155373	NaN	0	537.2764282226562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_YTVLAPC(Carbamidomethyl (C))HL_	REV__ENSG00000141736|ENST00000269571|ERBB2;REV__ENST00000584908.5_1_17:37856482-37868536:+|nuORF;REV__nc|ENSG00000141736|P04626-4|ERBB2;REV__nc|ENSG00000141736|P04626-5|ERBB2;REV__nc|ENSG00000141736|P04626-6|ERBB2	42.47446043378293	0.25855550551448697	2				NaN	NaN	0	NaN	11748	5389	17137
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17147	46.4	NaN	1629	30	0	81.519	0.139				-1	 	0	55	360.2064545278588	718.3983561225176	2	360.20648193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11750	5395	17146
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17155	46.432	NaN	1422.7	30	0	157.41	0.14				-1	 	0	51	382.21976616832666	762.4249794034533	2	382.2196960449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11752	5401	17154
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17167	46.482	NaN	1853.7	30	0	307.06	0.144			+	45462	TYAFINWF	8	53	531.2580509009401	1060.5015488686802	2	531.2578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TYAFINWF_	REV__ENSG00000141314|ENST00000269051|RHBDL3;REV__nc|ENSG00000141314|P58872-2|RHBDL3;REV__nc|ENSG00000141314|P58872-3|RHBDL3	47.91560031466742	0.6071945918984287	2				NaN	NaN	0	NaN	11755	5410	17166
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17171	46.498	NaN	3806	30	0	2462.2	0.215				-1	 	0	48	390.7330090084521	779.4514650837042	2	390.73284912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11756	5413	17170
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17172	46.502	NaN	3380.2	30	0	1361.8	0.031				-1	 	0	55	368.71980525806134	735.4250575829227	2	368.7200927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11757	5413	17170
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17176	46.516	NaN	2830	30	0	411.75	0.145			+	51562	YYGYPPRQN	9	63	579.271484375	NaN	0	579.271484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YYGYPPRQN_	REV__ENSG00000169612|ENST00000304191|RAMAC;REV__ENSG00000235272|ENST00000444122|RAMACL	35.200714571348534	0.2998460331538257	2				NaN	NaN	0	NaN	11758	5416	17175
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17180	46.532	NaN	2003.9	30	0	291.12	0.144	+			6899	CLRPSSLSTL	10	56	538.7940143387115	1075.5734757442228	2	538.7940063476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CLRPSSLSTL_	ENSG00000175449|ENST00000380005|RFESD	32.81241826257853	0.6118718159329168	2				NaN	NaN	0	NaN	11759	5419	17179
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17184	46.548	NaN	1932.9	30	0	296.95	0.145	+			49197	VVMTPVPLFSK	11	58	609.3508831610725	NaN	0	609.3511352539062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVMTPVPLFSK_	ENSG00000178950|ENST00000314167|GAK;GAK|p.L730*|1|0.09|ENSG00000178950|chr4:870772-870772|C/-|frameshift_variant;GAK|p.P1133Lfs*23|1|0.3|ENSG00000178950|chr4:851860-851860|G/-|frameshift_variant;GAK|p.P955Lfs*36|1|0.25|ENSG00000178950|chr4:866964-866964|G/-|frameshift_variant;GAK|p.S905Pfs*40|1|0.15|ENSG00000178950|chr4:867116-867116|G/-|frameshift_variant;GAK|p.V881Gfs*39|1|0.23|ENSG00000178950|chr4:867186-867187|-/C|frameshift_variant;nc|ENSG00000178950|O14976-2|GAK	51.52775601994872	0.30434581687306933	2				NaN	NaN	0	NaN	11760	5422	17183
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17191	46.58	NaN	915.99	30	0	51.053	0.214	+			29408	PATRTAPR	8	39	435.2510022745625	NaN	0	435.2503356933594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PATRTAPR_	ENST00000218230.5_1_X:48689512-48689653:-|nuORF	20.481830146152948	1.741893751539848	2				NaN	NaN	0	NaN	11761	5428	17190
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17192	46.583	NaN	1096.9	30	0	123.33	0.035	+			28012	MWLALLGAL	9	45	494.28980984010786	986.5650667470157	2	494.289794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MWLALLGAL_	ENSG00000203499|ENST00000527139|IQANK1	29.841539824830324	0.5243625958137083	2				NaN	NaN	0	NaN	11762	5428	17190
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17200	46.613	NaN	2010.9	30	0	551.48	0.143	+			34828	RYLTVAAVF	9	47	520.3006555523345	1038.586758171469	2	520.3006591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RYLTVAAVF_	ENSG00000104833|ENST00000264071|TUBB4A;ENSG00000188229|ENST00000340384|TUBB4B;ENSG00000196230|ENST00000327892|TUBB;ENST00000454403.1_1_13:41958968-41959286:-|nuORF;ENST00000604929.1_1_9:140136931-140138005:+|nuORF	49.536043120802724	0.308405419312776	2				NaN	NaN	0	NaN	11764	5434	17199
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17204	46.63	NaN	4358.8	30	0	846.96	0.143				-1	 	0	43	336.5341033168387	1006.5804805507162	3	336.5342102050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11765	5437	17203
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17224	46.725	NaN	1773.5	30	0	160.4	0.145			+	-1	HLCLMQGTAQ	10	60	587.7727012513367	NaN	0	587.7711791992188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_HLC(Carbamidomethyl (C))LM(Oxidation (M))QGTAQ_	REV__nc|ENSG00000146054|Q9C029-4|TRIM7	30.317721548370564	0.4006274431774794	2				NaN	NaN	0	NaN	11767	5455	17223
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17228	46.741	NaN	4570.1	30	0	342.31	0.139				-1	 	0	65	360.20643793545446	718.3983229377089	2	360.2065124511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11768	5458	17227
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17233	46.758	NaN	2019.6	30	0	189.32	0.145				-1	PYHCLGRLW	9	58	601.2980162530507	1200.5814795729013	2	601.298095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_PYHC(Carbamidomethyl (C))LGRLW_	KLF4|p.D429Lfs*13|1|0.08|ENSG00000136826|chr9:107485905-107485906|TC/-|frameshift_variant	35.200714571348534	0.47427825964483533	2				NaN	NaN	0	NaN	11770	5461	17232
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17237	46.774	NaN	1943.2	30	0	105.72	0.214				-1	 	0	53	382.21976616832666	762.4249794034533	2	382.2197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11771	5464	17236
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17238	46.777	NaN	2192	30	0	264.24	0.106			+	-1	SDQMCQFLLT	10	54	629.7758222600623	1257.5370915869246	2	629.777099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_SDQM(Oxidation (M))C(Carbamidomethyl (C))QFLLT_	REV__ENSG00000105576|ENST00000425528|TNPO2;REV__nc|ENSG00000105576|O14787-2|TNPO2	22.579656572578934	0.6954366826851017	2				NaN	NaN	0	NaN	11772	5464	17236
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17239	46.779	NaN	1277.8	30	0	183.03	0.035			+	18009	IIFGLSTLK	9	45	496.31279386001	990.61103478682	2	496.3124084472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IIFGLSTLK_	REV__ENSG00000164604|ENST00000424100|GPR85	51.33545320467046	0.2872990594074956	2				NaN	NaN	0	NaN	11773	5464	17236
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17243	46.793	NaN	814.2	30	0	108.49	0.145				-1	 	0	41	620.9748158721744	NaN	0	620.9747924804688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11774	5467	17242
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17247	46.81	NaN	693.09	30	0	86.544	0.143			+	17108	HSHLLAPTL	9	34	330.1910584535344	NaN	0	330.19097900390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HSHLLAPTL_	REV__RAVER1|p.R221H|1|0.3|ENSG00000161847|chr19:10328736-10328736|C/T|missense_variant	19.1035232394073	0.3723251548669699	2				NaN	NaN	0	NaN	11775	5470	17246
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17255	46.842	NaN	2597.6	30	0	893.88	0.139				-1	 	0	53	368.71973191660555	735.4249109000111	2	368.7195739746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11777	5476	17254
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17259	46.858	NaN	2016.2	30	0	220.52	0.143			+	29831	PKTSPGSKPL	10	55	506.29701116891613	1010.5794694046323	2	506.2975158691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PKTSPGSKPL_	REV__ENST00000468415.6_1_3:59035346-59035502:-|nuORF	36.446750945000026	0.5818864909973037	2				NaN	NaN	0	NaN	11778	5479	17258
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17263	46.874	NaN	2108.5	30	0	398.79	0.214			+	27157	MCLNEQNRI	9	49	374.17956858333264	NaN	0	374.1795959472656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MCLNEQNRI_	REV__ENST00000434457.6_2_9:19360473-19369888:+|nuORF	26.79610172149135	0.34227917631780574	2				NaN	NaN	0	NaN	11779	5482	17262
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17264	46.878	NaN	1023.8	30	0	109.77	0.03	+			47113	VLMKICLKA	9	41	340.20928941731455	NaN	0	340.208984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VLMKICLKA_	GRPR|p.A153V|1|0.4|ENSG00000126010|chrX:16150349-16150349|C/T|missense_variant	14.137123925751023	0.3891339986947948	2				NaN	NaN	0	NaN	11780	5482	17262
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17274	46.923	NaN	1137.1	30	0	49.458	0.141	+			34110	RSRGPRAA	8	48	435.7525634765625	NaN	0	435.7525634765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RSRGPRAA_	ENST00000561122.1_1_15:57179569-57180061:-|nuORF	14.664097394203935	1.7418937515398478	2				NaN	NaN	0	NaN	11781	5491	17273
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17281	46.955	NaN	738.15	30	0	88.922	0.214				-1	 	0	45	263.14881491373575	524.2830768942715	2	263.1488037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11782	5497	17280
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17282	46.959	NaN	1532.1	30	0	193	0.106	+			26910	LYANVDFFK	9	57	558.7899450482175	NaN	0	558.7900390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LYANVDFFK_	ABCA4|p.I398Sfs*14|1|0.14|ENSG00000198691|chr1:94079369-94079369|T/-|frameshift_variant;ENSG00000198691|ENST00000370225|ABCA4	60.11826168202944	0.14881452885248947	2				NaN	NaN	0	NaN	11783	5497	17280
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17283	46.961	NaN	913.19	30	0	76.902	0.106				-1	 	0	45	307.1749945057632	612.3354360783264	2	307.1750793457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11784	5497	17280
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17284	46.962	NaN	611.6	30	0	138.79	0.028				-1	 	0	38	241.13572965459292	480.25690637598586	2	241.13577270507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11785	5497	17280
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17288	46.976	NaN	4925.1	30	0	461.29	0.214				-1	 	0	62	338.19338637376154	674.3722198143231	2	338.1934509277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11786	5500	17287
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17289	46.98	NaN	5052.4	30	0	565.66	0.106	+			4305	ATGILGAVFK	10	59	488.794971212929	975.575389492658	2	488.79486083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATGILGAVFK_	ENSG00000127324|ENST00000247829|TSPAN8;ENST00000552128.2_1_12:71519116-71532942:-|nuORF	77.31757898189308	0.2175361111083648	2				NaN	NaN	0	NaN	11787	5500	17287
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17290	46.982	NaN	1212.1	30	0	71.101	0.106				-1	 	0	55	285.1618233914563	568.3090938497127	2	285.1619873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11788	5500	17287
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17291	46.984	NaN	3167.7	30	0	281.17	0.03	+			7607	DKAVCVRR	8	69	316.1803789258998	NaN	0	316.1803283691406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DKAVCVRR_	ENST00000568834.5_1_16:1833007-1837759:+|nuORF	26.79610172149135	1.7418937515398478	2				NaN	NaN	0	NaN	11789	5500	17287
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17298	47.013	NaN	809.92	30	0	179.38	0.214				-1	 	0	35	219.12272765606602	NaN	0	219.122802734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11790	5506	17297
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17299	47.017	NaN	1972.9	30	0	256.2	0.106				-1	 	0	53	567.2795143207189	566.2722378541189	1	567.2800903320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11791	5506	17297
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17300	47.019	NaN	1092.7	30	0	61.853	0.032			+	15891	GYYPNGGG	8	48	392.66814914810533	NaN	0	392.667724609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GYYPNGGG_	REV__tr|U7T3I1|U7T3I1_FUSNUCytochromec-typebiogenesisproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00416PE=4SV=1	23.036711822280957	1.7418937515398478	2				NaN	NaN	0	NaN	11792	5506	17297
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17304	47.033	NaN	2762.7	30	0	465.04	0.214	+			44174	TQTPKFQVL	9	57	531.3036783291609	1060.5928037251217	2	531.3032836914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TQTPKFQVL_	nc|ENSG00000211706|A0A0K0K1D8|TRBV6-1;nc|ENSG00000211721|A0A0K0K1A5|TRBV6-5	47.657333605630114	0.33044192980041115	2				NaN	NaN	0	NaN	11793	5509	17303
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17305	47.036	NaN	889.13	30	0	132.67	0.03	+			13117	GGGGTLVV	8	38	330.1910584535344	NaN	0	330.19110107421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GGGGTLVV_	ENSG00000130224|ENST00000317135|LRCH2;LRCH2|p.K721Sfs*22|1|0.19|ENSG00000130224|chrX:115122543-115122543|T/-|frameshift_variant;LRCH2|p.P51L|1|0.3|ENSG00000130224|chrX:115233890-115233890|G/A|missense_variant;nc|ENSG00000130224|Q5VUJ6-2|LRCH2	29.841539824830324	1.7418937515398478	2				NaN	NaN	0	NaN	11794	5509	17303
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17315	47.082	NaN	117210	30	0	14617	0.077				-1	 	0	95	360.20643793545446	718.3983229377089	2	360.2064208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11795	5518	17314
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17322	47.113	NaN	1721.9	30	0	142.83	0.143	+			5038	ATSFIKQIL	9	51	510.80798062532733	NaN	0	510.8074951171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSFIKQIL_	DAPK2|p.P226Lfs*17|1|0.2|ENSG00000035664|chr15:63926076-63926076|G/-|frameshift_variant;ENSG00000035664|ENST00000457488|DAPK2;ENST00000558482.5_1_15:64221904-64332460:-|nuORF;ENST00000559007.5_1_15:64204043-64263759:-|nuORF;nc|ENSG00000035664|Q9UIK4-2|DAPK2	56.72105179125745	0.16330365735109603	2				NaN	NaN	0	NaN	11796	5524	17321
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17326	47.129	NaN	2612.9	30	0	426.6	0.145			+	-1	DETIMKCMKS	10	62	629.776516912804	1257.538480892408	2	629.7769775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_DETIM(Oxidation (M))KC(Carbamidomethyl (C))MKS_	REV__ENSG00000103888|ENST00000394685|CEMIP;REV__nc|ENSG00000103888|Q8WUJ3-2|CEMIP	39.252832667884924	0.5560298534376815	2				NaN	NaN	0	NaN	11797	5527	17325
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17330	47.145	NaN	3205.2	30	0	2247.5	0.139				-1	 	0	39	348.72228110607756	695.4300092789551	2	348.72235107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11798	5530	17329
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17334	47.161	NaN	292.72	30	0	79.344	0.135				-1	 	0	21	221.13824877096118	440.2619446087224	2	221.13833618164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11799	5533	17333
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17338	47.178	NaN	643.11	30	0	78.152	0.214	+			13711	GPSRKPISF	9	35	330.1909700580434	NaN	0	330.1909484863281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GPSRKPISF_	ENST00000552279.1_1_12:58150872-58151028:+|nuORF	18.262085536374414	0.37517301184500873	2				NaN	NaN	0	NaN	11800	5536	17337
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17339	47.181	NaN	746.62	30	0	102.43	0.034	+			7940	DSKNHPEV	8	35	463.2230651431178	NaN	0	463.2229919433594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DSKNHPEV_	ADAM12|p.L804Pfs*27|1|0.37|ENSG00000148848|chr10:126036273-126036274|-/G|frameshift_variant;ADAM12|p.Q855Sfs*55|1|0.44|ENSG00000148848|chr10:126019802-126019803|-/G|frameshift_variant;ENSG00000148848|ENST00000448723|ADAM12;nc|ENSG00000148848|O43184-2|ADAM12;nc|ENSG00000148848|O43184-3|ADAM12;nc|ENSG00000148848|O43184-4|ADAM12;nc|ENSG00000148848|O43184|ADAM12	37.15910966729921	1.7418937515398478	2				NaN	NaN	0	NaN	11801	5536	17337
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17343	47.195	NaN	6875.6	30	0	4719.5	0.214				-1	 	0	50	368.71973191660555	735.4249109000111	2	368.71990966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11802	5539	17342
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17344	47.199	NaN	2730.2	30	0	930.01	0.106				-1	 	0	63	243.15137518284644	484.2881974324929	2	243.15145874023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11803	5539	17342
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17345	47.201	NaN	565.92	30	0	90.36	0.106				-1	 	0	28	199.12518978748074	396.2358266417615	2	199.1253204345703	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11804	5539	17342
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17346	47.203	NaN	5712.5	30	0	911.3	0.03				-1	 	0	56	318.1958983791562	634.3772438251124	2	318.1961975097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11805	5539	17342
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17350	47.217	NaN	293590	30	0	37595	0.14				-1	 	0	73	340.2089871027002	678.4034212722004	2	340.20916748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11806	5542	17349
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17351	47.219	NaN	3915.8	30	0	857.52	0.106				-1	 	0	41	336.5341033168387	1006.5804805507162	3	336.534423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11807	5542	17349
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17352	47.221	NaN	555.33	30	0	68.749	0.106				-1	 	0	29	265.1644411221273	528.3143293110546	2	265.16461181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11808	5542	17349
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17353	47.223	NaN	4043.3	30	0	365.38	0.106				-1	 	0	61	296.18273351167113	590.3509140901423	2	296.1827697753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11809	5542	17349
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17354	47.224	NaN	537.1	30	0	38.341	0.029			+	13680	GPFLKAAR	8	36	287.17751310794966	NaN	0	287.17779541015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GPFLKAAR_	REV__ENSG00000015568|ENST00000016946|RGPD5;REV__ENSG00000153165|ENST00000409886|RGPD3;REV__ENSG00000153201|ENST00000283195|RANBP2;REV__ENSG00000169629|ENST00000302558|RGPD8;REV__ENSG00000183054|ENST00000329516|RGPD6;REV__ENSG00000185304|ENST00000398146|RGPD2;REV__ENSG00000187627|ENST00000641458|RGPD1;REV__ENSG00000196862|ENST00000408999|RGPD4;REV__ENST00000471422.1_1_2:113179488-113180181:-|nuORF;REV__ENST00000495924.1_1_2:109347284-109347978:+|nuORF;REV__nc|ENSG00000183054|Q99666-2|RGPD5;REV__nc|ENSG00000187627|P0DJD0|RGPD1;REV__nc|ENSG00000196862|Q7Z3J3-2|RGPD4;REV__RANBP2|p.A864Lfs*3|1|0.3|ENSG00000153201|chr2:108758533-108758533|G/-|frameshift_variant;REV__RANBP2|p.C2737Vfs*35|1|0.18|ENSG00000153201|chr2:108772957-108772957|T/-|frameshift_variant;REV__RANBP2|p.F3068Lfs*10|1|0.06|ENSG00000153201|chr2:108782692-108782692|T/-|frameshift_variant;REV__RANBP2|p.H3114Sfs*18|1|0.33|ENSG00000153201|chr2:108782827-108782828|-/T|frameshift_variant;REV__RANBP2|p.K1989Nfs*9|1|0.05|ENSG00000153201|chr2:108766505-108766506|-/TATCCTG|frameshift_variant;REV__RANBP2|p.K2576Nfs*63|2|0.22|ENSG00000153201|chr2:108768262-108768262|A/-|frameshift_variant;REV__RANBP2|p.S1486Rfs*51|1|0.05|ENSG00000153201|chr2:108764996-108764997|-/ATTTTGTATTC|frameshift_variant;REV__RGPD2|p.F1350Lfs*25|1|0.25|ENSG00000185304|chr2:87782974-87782974|A/-|frameshift_variant;REV__RGPD3|p.V1441*|1|0.45|ENSG00000153165|chr2:106423647-106423647|T/-|frameshift_variant;REV__RGPD4|p.K568Nfs*33|1|0.14|ENSG00000196862|chr2:107859787-107859787|A/-|frameshift_variant	23.04248740728303	1.7418937515398478	2				NaN	NaN	0	NaN	11810	5542	17349
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17359	47.239	NaN	1166.9	30	0	76.751	0.139			+	-1	RRPCLVPPG	9	47	351.20025360600107	NaN	0	351.2004699707031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_RRPC(Carbamidomethyl (C))LVPPG_	REV__ENSG00000125841|ENST00000382285|NRSN2	27.882242232435846	0.3367954786602879	2				NaN	NaN	0	NaN	11812	5545	17358
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17368	47.273	NaN	3805.8	30	0	784.12	0.142	+			2162	ALLPALLQQ	9	53	483.8026144140633	965.5906758949267	2	483.8025207519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ALLPALLQQ_	ENSG00000179262|ENST00000586534|RAD23A;nc|ENSG00000179262|P54725-2|RAD23A;nc|ENSG00000179262|P54725-3|RAD23A	57.81127852772723	0.2318599694398087	2				NaN	NaN	0	NaN	11815	5551	17367
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17387	47.367	NaN	2120.9	30	0	528.31	0.145				-1	YAFFECKR	8	41	374.17956858333264	NaN	0	374.179443359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_YAFFEC(Carbamidomethyl (C))KR_	ENSG00000183513|ENST00000328709|COA5;ENST00000466848.1_1_2:99217217-99222254:-|nuORF;ENST00000483527.5_1_2:99217217-99224734:-|nuORF	26.79610172149135	1.7418937515398478	2				NaN	NaN	0	NaN	11816	5569	17386
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17391	47.383	NaN	1027.3	30	0	253.7	0.141	+			50931	YGTFLANN	8	39	450.21522355512815	NaN	0	450.21527099609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YGTFLANN_	ENSG00000108389|ENST00000682306|MTMR4;MTMR4|p.F1143Lfs*14|1|0.15|ENSG00000108389|chr17:58491822-58491823|-/T|frameshift_variant;nc|ENSG00000108389|Q9NYA4|MTMR4	40.5726180659479	1.7418937515398478	2				NaN	NaN	0	NaN	11817	5572	17390
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17395	47.4	NaN	1425.2	30	0	254.02	0.142			+	38390	SRVKGSVIK	9	56	487.3096069817613	NaN	0	487.310302734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SRVKGSVIK_	REV__ENST00000536649.5_1_19:14208073-14223129:-|nuORF;REV__ENST00000587533.1_1_19:14208073-14208361:-|nuORF	21.9598887501803	0.3626577482100488	2				NaN	NaN	0	NaN	11818	5575	17394
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17399	47.416	NaN	1405.9	30	0	168.71	0.143	+			5962	AVLLLFANK	9	58	494.813008713675	987.61146449415	2	494.8125305175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVLLLFANK_	ENSG00000168374|ENST00000303436|ARF4;ENST00000605447.1_1_9:136944076-136944538:+|nuORF	74.25504064058377	0.12238981753128622	2				NaN	NaN	0	NaN	11819	5578	17398
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17403	47.432	NaN	2815	30	0	236.81	0.14				-1	 	0	58	360.20643793545446	718.3983229377089	2	360.2064208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11820	5581	17402
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17421	47.511	NaN	1106.7	30	0	146.63	0.14			+	12332	GDIVTRPIIVI	11	52	399.25069089012527	NaN	0	399.25067138671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GDIVTRPIIVI_	REV__ENSG00000198952|ENST00000361813|SMG5;REV__SMG5|p.A961Gfs*3|1|0.36|ENSG00000198952|chr1:156250943-156250944|-/C|frameshift_variant	26.063383197487333	0.44926255568796863	2				NaN	NaN	0	NaN	11823	5596	17420
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17428	47.543	NaN	861.1	30	0	87.876	0.14				-1	CGSSCCSCCW	10	36	384.77166748046875	NaN	0	384.77166748046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_CGSSCCSC(Carbamidomethyl (C))C(Carbamidomethyl (C))W_	ENST00000228741.7_1_12:96588285-96617411:+|nuORF	7.3997283801893845	0.4201028297492154	2				NaN	NaN	0	NaN	11824	5602	17427
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17439	47.591	NaN	3630.5	30	0	817.32	0.143				-1	 	0	39	336.5341033168387	1006.5804805507162	3	336.5342712402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11826	5611	17438
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17452	47.655	NaN	1827.4	30	0	138.71	0.144			+	-1	AEVPRGMSLL	10	55	544.7925873898993	1087.5706218465984	2	544.7930297851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_AEVPRGM(Oxidation (M))SLL_	REV__ENST00000325147.13_1_11:204707-204863:-|nuORF	45.97224482568171	0.49411383603842696	2				NaN	NaN	0	NaN	11827	5623	17451
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17462	47.702	NaN	1792.8	30	0	212.66	0.143	+			36948	SILPAIFQK	9	55	508.8104838170284	1015.6064147008568	2	508.8110046386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SILPAIFQK_	ENSG00000166471|ENST00000528080|TMEM41B;ENST00000524543.5_1_11:9304973-9316821:-|nuORF;ENST00000533867.1_1_11:9304973-9309374:-|nuORF	47.657333605630114	0.33044192980041115	2				NaN	NaN	0	NaN	11828	5632	17461
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17469	47.734	NaN	2073.7	30	0	137.61	0.14	+			47369	VPGHRKGG	8	53	404.23302242915014	806.4514919251003	2	404.2326354980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VPGHRKGG_	ENST00000456159.1_1_7:116312547-116335818:+|nuORF	21.70233525837049	0.7917639344264583	2				NaN	NaN	0	NaN	11829	5638	17468
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17479	47.782	NaN	879.61	30	0	62.627	0.14				-1	 	0	41	382.2197606915781	762.4249684499562	2	382.2196960449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11830	5647	17478
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17483	47.798	NaN	1255	30	0	103.96	0.14				-1	 	0	47	360.20643793545446	718.3983229377089	2	360.2061462402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11831	5650	17482
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17509	47.924	NaN	857.24	30	0	64.316	0.14				-1	CGSSCCSCCW	10	46	384.7714538574219	NaN	0	384.7714538574219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_CGSSC(Carbamidomethyl (C))C(Carbamidomethyl (C))SCCW_	ENST00000228741.7_1_12:96588285-96617411:+|nuORF	1.8869224993972666	0.4201028297492154	2				NaN	NaN	0	NaN	11833	5674	17508
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17513	47.94	NaN	3753.5	30	0	877.01	0.143				-1	 	0	43	336.5341033168387	1006.5804805507162	3	336.53411865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11834	5677	17512
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17524	47.988	NaN	1536.4	30	0	112.26	0.214	+			6753	CDVCPLPRL	9	54	508.25843370374236	1014.5023144742847	2	508.2604675292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CDVCPLPRL_	ENST00000250894.8_2_16:1820092-1820212:+|nuORF	58.78195531508484	0.22376836668196862	2				NaN	NaN	0	NaN	11836	5686	17523
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17525	47.992	NaN	1701.3	30	0	247.63	0.037			+	-1	VMILSYFDT	9	44	368.8487854003906	NaN	0	368.8487854003906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_VM(Oxidation (M))ILSYFDT_	REV__ENSG00000260903|ENST00000562532|XKR7	34.172542307311794	0.30503706118289736	2				NaN	NaN	0	NaN	11837	5686	17523
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17530	48.006	NaN	1361.7	30	0	166.97	0.144	+			25209	LMLEAAYKL	9	49	526.2963507721931	1050.5781486111862	2	526.2952880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LMLEAAYKL_	nc|ENSG00000286920|Q5STR5|SMIM40	46.45678178249821	0.34452392205506005	2				NaN	NaN	0	NaN	11839	5689	17529
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17552	48.117	NaN	4377.4	30	0	374	0.14				-1	 	0	74	382.21967533571666	762.4247977382333	2	382.2197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11840	5710	17551
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17562	48.164	NaN	2504	30	0	321.02	0.145	+			14938	GTMEWIMIK	9	57	554.7797316129	1107.5449102926	2	554.7796630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTMEWIMIK_	ENSG00000168273|ENST00000477703|UQCC5	69.6276240434122	0.14239879520340665	2				NaN	NaN	0	NaN	11841	5719	17561
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17572	48.212	NaN	2538.7	30	0	340.08	0.214	+			42147	SYQKVIELF	9	59	563.8111728745123	NaN	0	563.8098754882812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SYQKVIELF_	ENSG00000168078|ENST00000301905|PBK;nc|ENSG00000168078|Q96KB5-2|PBK	44.377184641726394	0.24544280798894275	2				NaN	NaN	0	NaN	11842	5728	17571
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17573	48.215	NaN	1308.9	30	0	45.394	0.031			+	38692	SSKGVGGK	8	53	360.2063227569854	718.3980925807708	2	360.7085266113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSKGVGGK_	REV__tr|U7T6Q9|U7T6Q9_FUSNUArsenite-transportingATPaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00168PE=3SV=1	12.206847966760668	0.7875100812264838	2				NaN	NaN	0	NaN	11843	5728	17571
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17577	48.229	NaN	3780	30	0	2482.7	0.214				-1	 	0	50	390.73301669588733	779.4514804585747	2	390.7327575683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11844	5731	17576
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17578	48.233	NaN	2241.9	30	0	279.74	0.035	+			49605	VYGPLPQSF	9	55	504.26339414378043	1006.5122353543609	2	504.2626037597656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYGPLPQSF_	ENSG00000131143|ENST00000253452|COX4I1;ENST00000562929.1_1_16:85838708-85840477:+|nuORF;ENST00000564648.1_1_16:85839106-85840477:+|nuORF;ENST00000568339.5_1_16:85840315-85840477:+|nuORF	42.396135135203025	0.392153681582562	2				NaN	NaN	0	NaN	11845	5731	17576
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17588	48.279	NaN	3388.9	30	0	669.9	0.143				-1	 	0	45	336.5341033168387	1006.5804805507162	3	336.5342712402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11846	5740	17587
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17598	48.326	NaN	1763	30	0	309.57	0.145				-1	AYCPPRFPP	9	40	368.8478120734886	1103.521606820666	3	368.8478088378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_AYC(Carbamidomethyl (C))PPRFPP_	ENSG00000115155|ENST00000272371|OTOF;nc|ENSG00000115155|Q9HC10-2|OTOF;nc|ENSG00000115155|Q9HC10-3|OTOF;nc|ENSG00000115155|Q9HC10-4|OTOF;nc|ENSG00000115155|Q9HC10-5|OTOF;OTOF|p.E1062K|1|0.41|ENSG00000115155|chr2:26474617-26474617|C/T|missense_variant;OTOF|p.N1149Rfs*28|1|0.56|ENSG00000115155|chr2:26473530-26473531|-/C|frameshift_variant	29.14955571784316	0.5308295550522326	2				NaN	NaN	0	NaN	11847	5749	17597
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17614	48.405	NaN	422.37	30	0	50.147	0.137	+			16647	HHVPPGPL	8	32	285.16192626953125	NaN	0	285.16192626953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HHVPPGPL_	ENST00000418309.1_1_7:156396604-156398412:-|nuORF;ENST00000440711.1_1_7:156397865-156398412:-|nuORF;ENST00000447933.5_1_7:156265368-156398412:-|nuORF	7.690282842768113	1.7418937515398478	2				NaN	NaN	0	NaN	11848	5764	17613
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17622	48.437	NaN	3508.7	30	0	401.01	0.139				-1	 	0	59	362.2220492852027	722.4295456372054	2	362.22222900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11850	5770	17621
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17635	48.5	NaN	1164.9	30	0	118.43	0.214			+	50738	YEKFLDIVEG	10	43	404.87681103773434	NaN	0	404.8761901855469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YEKFLDIVEG_	REV__tr|U7SSF8|U7SSF8_FUSNUDUF4299domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01430PE=4SV=1	22.579656572578934	0.4201028297492154	2				NaN	NaN	0	NaN	11851	5782	17634
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17636	48.504	NaN	1340.6	30	0	174.36	0.106				-1	 	0	49	543.3012932754847	542.2940168088846	1	543.302001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11852	5782	17634
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17637	48.506	NaN	2188.3	30	0	807.9	0.028				-1	 	0	43	243.15145373108695	NaN	0	243.1511688232422	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11853	5782	17634
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17641	48.52	NaN	215.11	30	0	55.836	0.135				-1	 	0	15	221.1382820869815	440.262011240763	2	221.13836669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11854	5785	17640
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17648	48.552	NaN	679.22	30	0	132.63	0.135				-1	 	0	25	199.1251897161733	NaN	0	199.12515258789062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11855	5791	17647
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17652	48.568	NaN	654.53	30	0	144.39	0.136			+	15711	GVPTPIPL	8	37	265.1644620465423	NaN	0	265.16461181640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVPTPIPL_	REV__ENST00000486828.6_1_5:176910647-176917003:-|nuORF	12.206847966760668	1.7418937515398478	2				NaN	NaN	0	NaN	11856	5794	17651
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17662	48.615	NaN	2986.2	30	0	534.15	0.143				-1	 	0	39	336.5341033168387	1006.5804805507162	3	336.5341491699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11857	5803	17661
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17675	48.679	NaN	944.87	30	0	82.009	0.141	+			33466	RIRVSPGG	8	53	421.25393775273307	840.4933225722662	2	421.25347900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RIRVSPGG_	ENST00000477936.2_1_12:8613363-8613591:+|nuORF	18.324413293986947	0.7971860551947066	2				NaN	NaN	0	NaN	11858	5815	17674
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17688	48.742	NaN	10828	30	0	1214.7	0.139				-1	 	0	77	360.20641132018187	718.3982697071638	2	360.20654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11859	5827	17687
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17695	48.774	NaN	5703.5	30	0	869.9	0.139				-1	 	0	59	362.2220492852027	722.4295456372054	2	362.2220764160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11860	5833	17694
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17714	48.868	NaN	3648.5	30	0	715.34	0.145			+	7417	DELPKWERKSS	11	76	687.8539219888205	1373.693291044441	2	688.3551025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DELPKWERKSS_	REV__ENSG00000070214|ENST00000374720|SLC44A1;REV__nc|ENSG00000070214|Q8WWI5-2|SLC44A1;REV__nc|ENSG00000070214|Q8WWI5-3|SLC44A1	17.468008924990375	0.788697330333842	2				NaN	NaN	0	NaN	11861	5851	17713
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17718	48.884	NaN	924.64	30	0	181.99	0.141	+			19711	KDSTVLLI	8	35	444.7735320863339	887.5325112394678	2	444.7732238769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KDSTVLLI_	ENSG00000148110|ENST00000375344|MFSD14B;nc|ENSG00000148110|Q5SR56-2|MFSD14B	35.61828744233558	0.6843154725607303	2				NaN	NaN	0	NaN	11862	5854	17717
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17723	48.901	NaN	1902.3	30	0	262.47	0.213			+	26807	LVSNKIEDPPT	11	49	606.8267826872174	1211.6390124412346	2	606.8265380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LVSNKIEDPPT_	REV__ENSG00000136021|ENST00000360820|SCYL2;REV__ENST00000553148.1_1_12:100711499-100717500:+|nuORF	19.1035232394073	0.7810393085260824	2				NaN	NaN	0	NaN	11864	5857	17722
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17724	48.904	NaN	1208.1	30	0	199.01	0.035				-1	MVVMLLSLL	9	47	525.8003960810742	1049.5862392289482	2	525.8002319335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Oxidation (M)	_M(Oxidation (M))VVM(Oxidation (M))LLSLL_	ENSG00000196218|ENST00000359596|RYR1;ENSG00000198838|ENST00000634891|RYR3;nc|ENSG00000196218|P21817-2|RYR1;nc|ENSG00000196218|P21817-3|RYR1;nc|ENSG00000198838|Q15413-2|RYR3;RYR3|p.E3943Rfs*18|1|0.12|ENSG00000198838|chr15:33837800-33837801|-/A|frameshift_variant;RYR3|p.N4580Mfs*8|1|0.37|ENSG00000198838|chr15:33853618-33853618|A/-|frameshift_variant	24.20275056022122	0.577060078256802	2				NaN	NaN	0	NaN	11865	5857	17722
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17732	48.935	NaN	3075.1	30	0	325.05	0.214			+	33880	RRPAPASP	8	61	426.2462072478791	850.4778615625582	2	426.24566650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RRPAPASP_	REV__ENSG00000196642|ENST00000311502|RABL6;REV__HCN4|p.A21Pfs*211|2|0.22|ENSG00000138622|chr15:73368210-73368210|C/-|frameshift_variant;REV__nc|ENSG00000196642|Q3YEC7-2|RABL6;REV__nc|ENSG00000196642|Q3YEC7-3|RABL6;REV__RABL6|p.A346V|1|0.38|ENSG00000196642|chr9:136837573-136837573|C/T|missense_variant;REV__RABL6|p.K613Sfs*9|1|0.17|ENSG00000196642|chr9:136839766-136839766|C/-|frameshift_variant	25.450171626174864	0.7628259754767981	2				NaN	NaN	0	NaN	11867	5863	17731
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17733	48.938	NaN	2666.6	30	0	183.9	0.04				-1	PEPLNELMKYF	11	68	698.8406671691537	NaN	0	698.8417358398438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_PEPLNELM(Oxidation (M))KYF_	ENST00000366862.9_1_1:224340874-224340928:+|nuORF	15.333111300571575	0.456735970842152	2				NaN	NaN	0	NaN	11868	5863	17731
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17737	48.953	NaN	4157.5	30	0	803.49	0.214				-1	 	0	39	336.5341033168387	1006.5804805507162	3	336.53424072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11869	5866	17736
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17738	48.956	NaN	1370.4	30	0	305.29	0.033			+	5241	ATVATPVPL	9	41	434.75879199970393	NaN	0	434.7588195800781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATVATPVPL_	REV__ENSG00000172689|ENST00000308287|MS4A10	24.20275056022122	0.35506675290109213	2				NaN	NaN	0	NaN	11870	5866	17736
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17754	49.033	NaN	1150.8	30	0	106.67	0.142			+	-1	VLLAQLGPM	9	46	479.2771265246865	NaN	0	479.27752685546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_VLLAQLGPM(Oxidation (M))_	REV__ENST00000298139.5_1_8:30891382-30915948:+|nuORF	19.359975847455235	0.3714571876404798	2				NaN	NaN	0	NaN	11871	5881	17753
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17770	49.112	NaN	1031.6	30	0	77.408	0.139			+	-1	PLCLRARGP	9	39	347.198396868077	NaN	0	347.19830322265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_PLC(Carbamidomethyl (C))LRARGP_	REV__ENST00000595916.5_1_19:3880927-3893658:+|nuORF	20.94693142431847	0.3660861156085067	2				NaN	NaN	0	NaN	11872	5896	17769
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17777	49.144	NaN	984.78	30	0	80.877	0.139				-1	 	0	40	362.2220492852027	722.4295456372054	2	362.2219543457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11873	5902	17776
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17808	49.301	NaN	3887.4	30	0	1010.7	0.143				-1	 	0	34	336.5341033168387	1006.5804805507162	3	336.5343017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11874	5932	17807
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17812	49.317	NaN	1171.7	30	0	259.31	0.145			+	6525	AYDGNLHTIT	10	40	368.8480807754521	NaN	0	368.84771728515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AYDGNLHTIT_	REV__CDH4|p.R666H|1|0.12|ENSG00000179242|chr20:61928415-61928415|G/A|missense_variant	32.75053402867276	0.3926392905881664	2				NaN	NaN	0	NaN	11875	5935	17811
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17816	49.333	NaN	1235.3	30	0	235.54	0.143	+			34475	RVASPTSGVK	10	50	501.2903447167078	1000.5661365002156	2	501.29083251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVASPTSGVK_	ENSG00000185950|ENST00000375856|IRS2	28.081489160057373	0.6505064946289502	2				NaN	NaN	0	NaN	11876	5938	17815
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17835	49.428	NaN	2557.8	30	0	503.03	0.145	+			6654	AYVHMVTHF	9	43	374.1795751133679	NaN	0	374.17974853515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_AYVHM(Oxidation (M))VTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	45.9519527083369	0.2345902329052062	2				NaN	NaN	0	NaN	11877	5956	17834
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17839	49.444	NaN	940.81	30	0	365.19	0.214			+	7959	DSPVEGESN	9	28	467.1933076379703	932.3720623427406	2	467.1927795410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DSPVEGESN_	REV__ENSG00000077157|ENST00000608999|PPP1R12B;REV__nc|ENSG00000077157|O60237-2|PPP1R12B;REV__nc|ENSG00000077157|O60237-5|PPP1R12B;REV__nc|ENSG00000077157|O60237-6|PPP1R12B;REV__PPP1R12B|p.N573Rfs*12|1|0.05|ENSG00000077157|chr1:202449038-202449039|-/GAAGG|frameshift_variant	12.206847966760668	0.6112419832031292	2				NaN	NaN	0	NaN	11878	5959	17838
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17840	49.448	NaN	3486.4	30	0	386	0.106			+	-1	CCCYAIWSGC	10	67	640.2220177494278	1278.4294825656555	2	640.2225952148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	3 Carbamidomethyl (C)	_C(Carbamidomethyl (C))C(Carbamidomethyl (C))CYAIWSGC(Carbamidomethyl (C))_	REV__DNAH5|p.P3316Lfs*22|3|0.33|ENSG00000039139|chr5:13766130-13766130|G/-|frameshift_variant	10.865556482863946	0.761236200923858	2				NaN	NaN	0	NaN	11879	5959	17838
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17841	49.45	NaN	3791.6	30	0	351.32	0.106			+	-1	SSHSDDNCNMD	11	67	649.2065162164984	1296.3984794997966	2	649.7097778320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_SSHSDDNC(Carbamidomethyl (C))NM(Oxidation (M))D_	REV__NPAS3|p.G517S|1|0.11|ENSG00000151322|chr14:33799856-33799856|G/A|missense_variant	17.468008924990375	0.788697330333842	2				NaN	NaN	0	NaN	11880	5959	17838
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17842	49.451	NaN	3130.5	30	0	258.99	0.106	+			29237	NWDDSYDYW	9	64	632.2326330565055	1262.450713179811	2	632.2324829101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NWDDSYDYW_	ENSG00000154655|ENST00000317931|L3MBTL4;L3MBTL4|p.R516Gfs*63|1|0.34|ENSG00000154655|chr18:5969489-5969489|A/-|frameshift_variant;nc|ENSG00000154655|Q8NA19-2|L3MBTL4;nc|ENSG00000154655|Q8NA19|L3MBTL4	16.473147378115264	0.6112419832031293	2				NaN	NaN	0	NaN	11881	5959	17838
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17843	49.453	NaN	3790.7	30	0	171.96	0.041				-1	 	0	71	732.6624486638266	NaN	0	732.6599731445312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11882	5959	17838
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17847	49.467	NaN	6285.1	30	0	516.37	0.214			+	33881	RRPAPPGG	8	64	404.2329241571201	806.4512953810403	2	404.23272705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RRPAPPGG_	REV__ENSG00000272333|ENST00000420124|KMT2B;REV__KMT2B|p.A2538Pfs*76|1|0.42|ENSG00000272333|chr19:35737693-35737693|G/-|frameshift_variant;REV__KMT2B|p.D1589Gfs*89|1|0.28|ENSG00000272333|chr19:35729058-35729059|-/G|frameshift_variant;REV__KMT2B|p.G1199Afs*156|1|0.16|ENSG00000272333|chr19:35725283-35725283|G/-|frameshift_variant;REV__KMT2B|p.G1879Vfs*16|5|0.4|ENSG00000272333|chr19:35732101-35732101|G/-|frameshift_variant;REV__KMT2B|p.G2123Vfs*30|1|0.34|ENSG00000272333|chr19:35732913-35732913|G/-|frameshift_variant;REV__KMT2B|p.L2136Pfs*17|1|0.27|ENSG00000272333|chr19:35732956-35732956|T/-|frameshift_variant;REV__KMT2B|p.P1201Rfs*154|1|0.37|ENSG00000272333|chr19:35725288-35725288|C/-|frameshift_variant;REV__KMT2B|p.P1821Hfs*74|1|0.36|ENSG00000272333|chr19:35731927-35731927|C/-|frameshift_variant;REV__KMT2B|p.R1911Dfs*23|1|0.18|ENSG00000272333|chr19:35732274-35732274|C/-|frameshift_variant;REV__KMT2B|p.S1095L|1|0.14|ENSG00000272333|chr19:35723957-35723957|C/T|missense_variant	14.664097394203935	0.7913966407026132	2				NaN	NaN	0	NaN	11883	5962	17846
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17848	49.471	NaN	3883.7	30	0	321.93	0.106			+	-1	WCGACSEHCV	10	73	633.2277400354451	1264.44092713769	2	633.2306518554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	3 Carbamidomethyl (C)	_WC(Carbamidomethyl (C))GAC(Carbamidomethyl (C))SEHC(Carbamidomethyl (C))V_	REV__ENSG00000138759|ENST00000512123|FRAS1;REV__FRAS1|p.C3202Afs*11|1|0.32|ENSG00000138759|chr4:78508825-78508825|C/-|frameshift_variant;REV__FRAS1|p.G3456Afs*3|1|0.28|ENSG00000138759|chr4:78515987-78515987|G/-|frameshift_variant;REV__FRAS1|p.P3289Lfs*45|1|0.05|ENSG00000138759|chr4:78511358-78511359|-/T|frameshift_variant;REV__FRAS1|p.V2385Sfs*37|1|0.28|ENSG00000138759|chr4:78466329-78466329|G/-|frameshift_variant;REV__nc|ENSG00000138759|Q86XX4-4|FRAS1;REV__nc|ENSG00000138759|Q86XX4-5|FRAS1;REV__nc|ENSG00000138759|Q86XX4-6|FRAS1;REV__nc|ENSG00000138759|Q86XX4|FRAS1	23.04248740728303	0.69165701907106	2				NaN	NaN	0	NaN	11884	5962	17846
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17849	49.473	NaN	3616.8	30	0	284.68	0.106				-1	 	0	63	621.2486905534156	1240.482828173631	2	621.2489013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11885	5962	17846
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17850	49.475	NaN	3041.5	30	0	225.2	0.106			+	-1	LWCCCVMPM	9	65	628.7447193801538	NaN	0	628.7445678710938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	3 Carbamidomethyl (C)	_LWC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))VMPM_	REV__ENST00000355315.7_2_8:57130132-57130228:+|nuORF	29.841539824830324	0.32690339240668626	2				NaN	NaN	0	NaN	11886	5962	17846
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17851	49.477	NaN	4566.5	30	0	283.57	0.106				-1	DGNPYMCEEC	10	69	645.7082578747247	1289.4019628162494	2	645.7081298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C),Oxidation (M)	_DGNPYM(Oxidation (M))C(Carbamidomethyl (C))EEC(Carbamidomethyl (C))_	ENSG00000198182|ENST00000355202|ZNF607;nc|ENSG00000198182|Q96SK3-2|ZNF607;nc|ENSG00000198182|Q96SK3-3|ZNF607	17.468008924990375	0.7276870902328821	2				NaN	NaN	0	NaN	11887	5962	17846
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17852	49.478	NaN	1793	30	0	330.12	0.106	+			6797	CFTCSCCCL	9	43	491.65196286188535	981.2893727905707	2	491.6521911621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_CFTCSCCCL_	ENSG00000164054|ENST00000296444|SHISA5;ENST00000460758.1_1_3:48511100-48514492:-|nuORF;ENST00000465449.5_1_3:48510508-48514931:-|nuORF;ENST00000466424.5_1_3:48509548-48511229:-|nuORF;ENST00000494854.5_1_3:48510739-48514492:-|nuORF;nc|ENSG00000164054|Q8N114-2|SHISA5;nc|ENSG00000164054|Q8N114-3|SHISA5;nc|ENSG00000164054|Q8N114-4|SHISA5;nc|ENSG00000164054|Q8N114-5|SHISA5	14.664097394203935	0.6112419832031292	2				NaN	NaN	0	NaN	11888	5962	17846
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17853	49.48	NaN	1406.9	30	0	134.93	0.034				-1	CPSECSHM	8	54	483.6601121144084	965.3056712956168	2	483.6625061035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C),Oxidation (M)	_CPSEC(Carbamidomethyl (C))SHM(Oxidation (M))_	ENST00000557056.5_1_14:24792442-24793534:-|nuORF	19.359975847455235	0.7988239741663654	2				NaN	NaN	0	NaN	11889	5962	17846
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17857	49.494	NaN	4261.9	30	0	2873.8	0.214	+			30008	PPKRRGGG	8	56	412.74635093096964	823.4781489287393	2	412.7458801269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PPKRRGGG_	ENSG00000142661|ENST00000374434|MYOM3;nc|ENSG00000142661|Q5VTT5-2|MYOM3	15.63621529709179	0.7929342111279789	2				NaN	NaN	0	NaN	11890	5965	17856
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17858	49.498	NaN	6204.5	30	0	717.37	0.106			+	-1	CSASCCGDCWG	11	72	660.2005493584093	NaN	0	660.2030029296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	4 Carbamidomethyl (C)	_C(Carbamidomethyl (C))SASC(Carbamidomethyl (C))C(Carbamidomethyl (C))GDC(Carbamidomethyl (C))WG_	REV__LMF2|p.Q154Rfs*34|1|0.18|ENSG00000100258|chr22:50506420-50506420|G/-|frameshift_variant	9.705651100619752	0.456735970842152	2				NaN	NaN	0	NaN	11891	5965	17856
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17859	49.5	NaN	5509.6	30	0	481.96	0.106			+	-1	NDMCDMGDEDY	11	81	698.6983703532044	NaN	0	698.6998901367188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),2 Oxidation (M)	_NDM(Oxidation (M))C(Carbamidomethyl (C))DM(Oxidation (M))GDEDY_	REV__ENSG00000117020|ENST00000673466|AKT3	12.206681093483082	0.456735970842152	2				NaN	NaN	0	NaN	11892	5965	17856
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17860	49.501	NaN	1881.5	30	0	168.82	0.106				-1	 	0	57	550.1300486881579	NaN	0	550.1300659179688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11893	5965	17856
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17861	49.503	NaN	2708.9	30	0	198.18	0.106				-1	 	0	71	618.1155228223373	617.1082463557373	1	618.1158447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11894	5965	17856
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17862	49.505	NaN	4922.4	30	0	220.78	0.041				-1	 	0	75	726.1636189454711	NaN	0	726.1577758789062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11895	5965	17856
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17866	49.519	NaN	5314.7	30	0	388.2	0.211				-1	 	0	81	702.6468218767341	NaN	0	702.7021484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11896	5968	17865
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17867	49.523	NaN	5876.6	30	0	436.09	0.106			+	-1	YDMCEDTEADM	11	77	677.707318261421	NaN	0	677.708740234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Oxidation (M)	_YDM(Oxidation (M))CEDTEADM(Oxidation (M))_	REV__ENSG00000130940|ENST00000377022|CASZ1	19.996771675451527	0.456735970842152	2				NaN	NaN	0	NaN	11897	5968	17865
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17868	49.525	NaN	3830.1	30	0	301.3	0.106			+	-1	CCCDDEHDCC	10	70	715.6793823242188	NaN	0	715.6793823242188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	5 Carbamidomethyl (C)	_C(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))DDEHDC(Carbamidomethyl (C))C(Carbamidomethyl (C))_	REV__ENSG00000198854|ENST00000368775|C1orf68	10.865556482863946	0.4201028297492154	2				NaN	NaN	0	NaN	11898	5968	17865
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17869	49.526	NaN	3008.3	30	0	166.31	0.042				-1	 	0	78	740.63916015625	NaN	0	740.63916015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11899	5968	17865
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17873	49.541	NaN	10907	30	0	1759	0.211			+	-1	EDCMCSCCSQ	10	81	668.6897610841123	NaN	0	668.6886596679688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	4 Carbamidomethyl (C)	_EDC(Carbamidomethyl (C))MC(Carbamidomethyl (C))SC(Carbamidomethyl (C))C(Carbamidomethyl (C))SQ_	REV__ENSG00000172538|ENST00000311787|FAM170B	5.921104790170933	0.4201028297492154	2				NaN	NaN	0	NaN	11900	5971	17872
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17874	49.544	NaN	6636.4	30	0	420.22	0.106			+	-1	HYCQQCQCMDS	11	75	681.2216514243818	1360.4287499155635	2	681.2205810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_HYCQQCQCM(Oxidation (M))DS_	REV__ENST00000318266.9_1_20:2936298-2945537:+|nuORF;REV__ENST00000380393.7_1_20:2903898-2945537:+|nuORF;REV__ENST00000431048.5_1_20:2854325-2945537:+|nuORF	9.705651100619752	0.8250432705525658	2				NaN	NaN	0	NaN	11901	5971	17872
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17875	49.546	NaN	6540.4	30	0	481.34	0.106			+	-1	CCCCGEDEEV	10	73	659.1943884051676	NaN	0	659.194091796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	4 Carbamidomethyl (C)	_C(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))GEDEEV_	REV__ENSG00000197136|ENST00000355703|PCNX3;REV__ENST00000439247.2_1_11:65394334-65404446:+|nuORF;REV__nc|ENSG00000197136|Q9H6A9-3|PCNX3	15.641811463095205	0.4201028297492154	2				NaN	NaN	0	NaN	11902	5971	17872
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17876	49.548	NaN	6919.2	30	0	573.31	0.106				-1	CDEYECACNC	10	80	683.194396377864	NaN	0	683.1937866210938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term),3 Carbamidomethyl (C)	_(Acetyl (Protein N-term))C(Carbamidomethyl (C))DEYEC(Carbamidomethyl (C))AC(Carbamidomethyl (C))NC_	ENSG00000110799|ENST00000261405|VWF;VWF|p.V2399I|1|0.16|ENSG00000110799|chr12:5981878-5981878|C/T|missense_variant	2.92943323627438	0.4201028297492154	2				NaN	NaN	0	NaN	11903	5971	17872
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17877	49.55	NaN	4240.5	30	0	263.53	0.041				-1	 	0	79	718.1744041576902	NaN	0	718.1737060546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11904	5971	17872
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17881	49.564	NaN	8324.2	30	0	646.7	0.212				-1	ETCCPCCCCP	10	83	673.6895592917031	NaN	0	673.6896362304688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	5 Carbamidomethyl (C)	_ETC(Carbamidomethyl (C))CPC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))P_	ENST00000599649.5_1_19:52149845-52150035:-|nuORF	23.04248740728303	0.42010282974921537	2				NaN	NaN	0	NaN	11905	5974	17880
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17882	49.567	NaN	4259.1	30	0	2115.9	0.106			+	39460	STEPSYHP	8	59	459.2040810752828	916.3936092173656	2	459.2039489746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STEPSYHP_	REV__DNAH2|p.K4326Rfs*84|3|0.27|ENSG00000183914|chr17:7832920-7832920|C/-|frameshift_variant;REV__DNAH2|p.Q4263Sfs*13|1|0.12|ENSG00000183914|chr17:7832639-7832639|C/-|frameshift_variant;REV__ENSG00000183914|ENST00000572933|DNAH2;REV__nc|ENSG00000183914|Q9P225-2|DNAH2	24.20275056022122	0.7724576178584145	2				NaN	NaN	0	NaN	11906	5974	17880
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17883	49.569	NaN	2033.1	30	0	733.33	0.106			+	-1	CNQVPCCA	8	46	476.1780264185166	950.3414999038332	2	476.1794128417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))NQVPC(Carbamidomethyl (C))CA_	REV__ENSG00000215182|ENST00000621226|MUC5AC	15.63621529709179	0.7929342111279789	2				NaN	NaN	0	NaN	11907	5974	17880
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17884	49.571	NaN	1769	30	0	344.43	0.106				-1	DNGAGYCSN	9	47	479.1725008169064	956.3304487006128	2	479.171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_DNGAGYC(Carbamidomethyl (C))SN_	ENSG00000243649|ENST00000425368|CFB;nc|ENSG00000243649|P00751-2|CFB	21.9598887501803	0.5980208138527809	2				NaN	NaN	0	NaN	11908	5974	17880
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17885	49.573	NaN	2087.3	30	0	1142.7	0.106				-1	 	0	41	327.1068533684755	652.1991538037511	2	327.10870361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11909	5974	17880
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17886	49.575	NaN	7030.6	30	0	488.01	0.106				-1	 	0	81	685.1681185912485	NaN	0	685.1690673828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11910	5974	17880
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17887	49.577	NaN	1862.5	30	0	328.45	0.035				-1	CDGCCSASC	9	45	510.13595797769887	NaN	0	510.1368713378906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	3 Carbamidomethyl (C)	_C(Carbamidomethyl (C))DGC(Carbamidomethyl (C))C(Carbamidomethyl (C))SASC_	LMF2|p.Q154Rfs*34|1|0.18|ENSG00000100258|chr22:50506420-50506420|G/-|frameshift_variant	3.6843469609004	0.40727630907727536	2				NaN	NaN	0	NaN	11911	5974	17880
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17891	49.591	NaN	6722.9	30	0	709.32	0.212			+	-1	WCGACSEHCV	10	74	633.2277400354451	1264.44092713769	2	633.7294311523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	3 Carbamidomethyl (C)	_WC(Carbamidomethyl (C))GAC(Carbamidomethyl (C))SEHC(Carbamidomethyl (C))V_	REV__ENSG00000138759|ENST00000512123|FRAS1;REV__FRAS1|p.C3202Afs*11|1|0.32|ENSG00000138759|chr4:78508825-78508825|C/-|frameshift_variant;REV__FRAS1|p.G3456Afs*3|1|0.28|ENSG00000138759|chr4:78515987-78515987|G/-|frameshift_variant;REV__FRAS1|p.P3289Lfs*45|1|0.05|ENSG00000138759|chr4:78511358-78511359|-/T|frameshift_variant;REV__FRAS1|p.V2385Sfs*37|1|0.28|ENSG00000138759|chr4:78466329-78466329|G/-|frameshift_variant;REV__nc|ENSG00000138759|Q86XX4-4|FRAS1;REV__nc|ENSG00000138759|Q86XX4-5|FRAS1;REV__nc|ENSG00000138759|Q86XX4-6|FRAS1;REV__nc|ENSG00000138759|Q86XX4|FRAS1	24.20275056022122	0.6821818413321409	2				NaN	NaN	0	NaN	11912	5977	17890
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17892	49.594	NaN	8902.1	30	0	585.05	0.106			+	-1	NHCQCMCSSNY	11	76	653.2077112479735	1304.400869562747	2	653.7096557617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_NHCQCM(Oxidation (M))CSSNY_	REV__ENST00000445430.5_1_3:195412816-195412894:+|nuORF	8.693696342081763	0.8297815791940972	2				NaN	NaN	0	NaN	11913	5977	17890
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17893	49.596	NaN	9041.6	30	0	896.77	0.106			+	-1	PCHCWCPCC	9	77	661.2060789167753	1320.3976049003504	2	661.205810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term),4 Carbamidomethyl (C)	_(Acetyl (Protein N-term))PC(Carbamidomethyl (C))HC(Carbamidomethyl (C))WC(Carbamidomethyl (C))PC(Carbamidomethyl (C))C_	REV__ENST00000548568.5_1_12:120636762-120636819:-|nuORF	14.664097394203935	0.6112419832031292	2				NaN	NaN	0	NaN	11914	5977	17890
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17894	49.598	NaN	2319.9	30	0	237.22	0.106				-1	LDDMCDDC	8	57	493.64902147470826	985.2834900162165	2	493.6487731933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_LDDMC(Carbamidomethyl (C))DDC_	tr|U7SXD8|U7SXD8_FUSNUHistidine--tRNAligaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=hisSPE=3SV=1	13.775330524044264	0.789990904165365	2				NaN	NaN	0	NaN	11915	5977	17890
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17895	49.6	NaN	6206	30	0	440.86	0.106				-1	 	0	77	684.1676072785737	NaN	0	684.168701171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11916	5977	17890
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17896	49.601	NaN	2769.2	30	0	353.27	0.106	+			31640	QMRLKNHRWYK	11	57	520.6175255311167	NaN	0	520.6199340820312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QMRLKNHRWYK_	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	17.833141474888023	0.456735970842152	2				NaN	NaN	0	NaN	11917	5977	17890
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17897	49.603	NaN	2594	30	0	238.37	0.037				-1	QCLSCDSGMD	10	58	566.1912560905995	1130.367959247999	2	566.191650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C),Oxidation (M)	_QCLSC(Carbamidomethyl (C))DSGM(Oxidation (M))D_	ENST00000504338.5_1_12:54577600-54582633:-|nuORF;ENST00000504797.1_1_12:54577600-54582666:-|nuORF	26.69291269510374	0.6618461711292317	2				NaN	NaN	0	NaN	11918	5977	17890
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17901	49.617	NaN	5924.9	30	0	221.33	0.211				-1	 	0	81	686.1696447564336	NaN	0	686.169189453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11919	5980	17900
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17902	49.621	NaN	1375.9	30	0	217.74	0.106				-1	DAMEMVVD	8	38	471.1841515801295	940.353750227059	2	471.1830749511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Oxidation (M)	_DAM(Oxidation (M))EM(Oxidation (M))VVD_	ENSG00000167395|ENST00000300850|ZNF646;nc|ENSG00000167395|O15015-1|ZNF646;ZNF646|p.C1366Lfs*22|1|0.14|ENSG00000167395|chr16:31080418-31080419|-/T|frameshift_variant	12.959181472943097	0.7887000251064199	2				NaN	NaN	0	NaN	11920	5980	17900
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17903	49.623	NaN	1767.4	30	0	344.18	0.106				-1	CNCCCRCC	8	48	511.1321710101161	NaN	0	511.13018798828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))NCC(Carbamidomethyl (C))CRCC_	ENSG00000183067|ENST00000380588|IGSF5	4.6817480819748125	1.7418937515398478	2				NaN	NaN	0	NaN	11921	5980	17900
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17904	49.625	NaN	1766.6	30	0	184.78	0.106			+	-1	TCMCACACM	9	52	505.13943401361183	1008.2643150940237	2	505.13934326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_TCMC(Carbamidomethyl (C))ACACM(Oxidation (M))_	REV__ENST00000544665.7_1_16:31343047-31343377:+|nuORF	12.959181472943097	0.6112419832031292	2				NaN	NaN	0	NaN	11922	5980	17900
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17905	49.626	NaN	2936.2	30	0	170.03	0.106			+	13796	GQLEKLSSPL	10	60	536.3058929442965	NaN	0	536.30517578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GQLEKLSSPL_	REV__ENST00000524630.5_1_11:57585076-57585268:+|nuORF	56.72105179125745	0.2610545891966633	2				NaN	NaN	0	NaN	11923	5980	17900
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17906	49.628	NaN	2734.5	30	0	270.94	0.035			+	-1	SHCYCDCC	8	61	524.1413753059642	NaN	0	524.1409912109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Carbamidomethyl (C)	_SHCYC(Carbamidomethyl (C))DC(Carbamidomethyl (C))C_	REV__ENST00000367041.5_1_1:207958419-207963612:+|nuORF;REV__ENST00000471987.1_1_1:207958419-207959036:+|nuORF;REV__ENST00000480003.5_1_1:207958419-207966884:+|nuORF	14.664097394203935	1.7418937515398478	2				NaN	NaN	0	NaN	11924	5980	17900
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17910	49.642	NaN	3485.7	30	0	788.17	0.214				-1	 	0	52	336.5341033168387	1006.5804805507162	3	336.5340270996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11925	5983	17909
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17911	49.646	NaN	4668.6	30	0	306.2	0.106				-1	 	0	68	705.1836934179696	704.1764169513696	1	705.1878662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11926	5983	17909
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17912	49.648	NaN	4505.9	30	0	294.47	0.106				-1	 	0	83	719.1714349097815	NaN	0	719.1690673828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11927	5983	17909
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17913	49.65	NaN	202.1	30	0	33.919	0.106				-1	 	0	18	260.07051983343905	518.1264867336781	2	260.0721740722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11928	5983	17909
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17914	49.651	NaN	2891.3	30	0	216.9	0.106				-1	KERRMRFYIRH	11	60	550.6301347641758	NaN	0	550.630615234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))KERRM(Oxidation (M))RFYIRH_	CACNA1A|p.R481H|1|0.07|ENSG00000141837|chr19:13317225-13317225|C/T|missense_variant	1.5229847967890655	0.456735970842152	2				NaN	NaN	0	NaN	11929	5983	17909
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17915	49.653	NaN	7767.8	30	0	5769.2	0.106				-1	 	0	41	318.1226108892381	634.2306688452762	2	318.1232604980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11930	5983	17909
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17916	49.655	NaN	1974.7	30	0	408.42	0.034				-1	CASFNGNCC	9	52	488.16144972484244	NaN	0	488.16143798828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_C(Carbamidomethyl (C))ASFNGNCC_	ENSG00000138315|ENST00000334011|OIT3;nc|ENSG00000138315|Q8WWZ8-2|OIT3;OIT3|p.A104D|1|0.45|ENSG00000138315|chr10:72898913-72898913|C/A|missense_variant	23.04248740728303	0.3589936788096251	2				NaN	NaN	0	NaN	11931	5983	17909
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17921	49.67	NaN	3207.7	30	0	275.85	0.214				-1	NCEDMDEC	8	58	500.6366481414259	999.2587433496518	2	501.1376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))NCEDMDEC_	ENSG00000166147|ENST00000316623|FBN1;FBN1|p.R579G|1|0.38|ENSG00000166147|chr15:48508684-48508684|T/C|missense_variant	4.316272785109212	0.7769738875864834	2				NaN	NaN	0	NaN	11933	5986	17920
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17922	49.673	NaN	7291.9	30	0	351.1	0.106			+	-1	FCWFCCCCC	9	85	701.7017279207344	NaN	0	701.7000732421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	5 Carbamidomethyl (C)	_FC(Carbamidomethyl (C))WFC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))C_	REV__ENST00000316660.6_1_18:57570359-57570470:+|nuORF	1.3276451902352358	0.4072763090772754	2				NaN	NaN	0	NaN	11934	5986	17920
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17923	49.675	NaN	2786.1	30	0	382.9	0.106				-1	DIFICKKRYKW	11	57	519.6198497017405	NaN	0	519.6197509765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_DIFIC(Carbamidomethyl (C))KKRYKW_	TTC28|p.D729Rfs*10|1|0.19|ENSG00000100154|chr22:28107660-28107661|-/T|frameshift_variant	17.16674453292914	0.456735970842152	2				NaN	NaN	0	NaN	11935	5986	17920
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17924	49.677	NaN	1128.6	30	0	242.4	0.106			+	34117	RSSCCCCC	8	40	432.6183135252986	863.2220741173973	2	432.6176452636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RSSCCCCC_	REV__ENSG00000080709|ENST00000673685|KCNN2	1.46482723592726	0.7814164654673592	2				NaN	NaN	0	NaN	11936	5986	17920
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17925	49.679	NaN	1069.8	30	0	339.7	0.106			+	7063	CTSWFEGV	8	31	310.133559918328	NaN	0	310.1336975097656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_CTSWFEGV_	REV__ENST00000419296.1_1_2:110752028-110752415:+|nuORF	17.364965105453717	1.7418937515398478	2				NaN	NaN	0	NaN	11937	5986	17920
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17926	49.68	NaN	2620.5	30	0	357.58	0.106				-1	 	0	66	617.6194458007812	NaN	0	617.6194458007812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11938	5986	17920
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17927	49.682	NaN	1891.6	30	0	221.51	0.037				-1	 	0	59	562.1045847700644	NaN	0	562.103759765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11939	5986	17920
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17931	49.696	NaN	2382.7	30	0	208.3	0.214			+	-1	DVCDCCED	8	57	500.6366481414259	999.2587433496518	2	500.6382751464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))DVC(Carbamidomethyl (C))DCCED_	REV__nc|ENSG00000128791|Q9GZX9-2|TWSG1	8.231297230196988	0.7812220690224883	2				NaN	NaN	0	NaN	11940	5989	17930
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17932	49.7	NaN	2606.6	30	0	456.2	0.106				-1	LEFLFLRRRCF	11	61	519.6198497017405	NaN	0	519.6200561523438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LEFLFLRRRC(Carbamidomethyl (C))F_	ENST00000463422.5_1_2:85981774-86000028:+|nuORF;nc|ENSG00000168874|Q96SQ7-2|ATOH8	9.21180021271957	0.456735970842152	2				NaN	NaN	0	NaN	11941	5989	17930
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17933	49.702	NaN	6593.1	30	0	424.08	0.106			+	-1	NDMCDMGDEDY	11	80	698.6983703532044	NaN	0	698.6988525390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),2 Oxidation (M)	_NDM(Oxidation (M))C(Carbamidomethyl (C))DM(Oxidation (M))GDEDY_	REV__ENSG00000117020|ENST00000673466|AKT3	0.6901697559489958	0.456735970842152	2				NaN	NaN	0	NaN	11942	5989	17930
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17934	49.704	NaN	1509.1	30	0	203.01	0.106			+	-1	RWTRWTQPLFC	11	51	531.596477830048	NaN	0	531.59619140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))RWTRWTQPLFC(Carbamidomethyl (C))_	REV__LRRC43|p.R54C|1|0.26|ENSG00000158113|chr12:122184528-122184528|C/T|missense_variant	9.64613948735714	0.456735970842152	2				NaN	NaN	0	NaN	11943	5989	17930
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17935	49.705	NaN	1442.4	30	0	265.97	0.106				-1	AYCPPRFPP	9	40	368.84793400490236	NaN	0	368.84765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_AYC(Carbamidomethyl (C))PPRFPP_	ENSG00000115155|ENST00000272371|OTOF;nc|ENSG00000115155|Q9HC10-2|OTOF;nc|ENSG00000115155|Q9HC10-3|OTOF;nc|ENSG00000115155|Q9HC10-4|OTOF;nc|ENSG00000115155|Q9HC10-5|OTOF;OTOF|p.E1062K|1|0.41|ENSG00000115155|chr2:26474617-26474617|C/T|missense_variant;OTOF|p.N1149Rfs*28|1|0.56|ENSG00000115155|chr2:26473530-26473531|-/C|frameshift_variant	21.9598887501803	0.3626577482100488	2				NaN	NaN	0	NaN	11944	5989	17930
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17936	49.707	NaN	2210.4	30	0	197.32	0.106				-1	CCQPCCCET	9	57	580.66796875	NaN	0	580.66796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	3 Carbamidomethyl (C)	_C(Carbamidomethyl (C))C(Carbamidomethyl (C))QPC(Carbamidomethyl (C))CCET_	KRTAP1-5|p.S64C|1|0.27|ENSG00000221852|chr17:41026966-41026966|T/A|missense_variant	11.511019455917149	0.3980220838287494	2				NaN	NaN	0	NaN	11945	5989	17930
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17937	49.709	NaN	2440.2	30	0	226.71	0.036			+	-1	WRRWLTRMCRQ	11	57	555.61669921875	NaN	0	555.61669921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C),Oxidation (M)	_WRRWLTRM(Oxidation (M))C(Carbamidomethyl (C))RQ_	REV__ENST00000549488.5_1_12:53693918-53699773:+|nuORF	0.37141330420238305	0.456735970842152	2				NaN	NaN	0	NaN	11946	5989	17930
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17941	49.723	NaN	13017	30	0	1589.9	0.212			+	-1	SPDQCEDMDFC	11	79	653.2077112479735	1304.400869562747	2	653.20947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_SPDQCEDM(Oxidation (M))DFC_	REV__ENSG00000049323|ENST00000404816|LTBP1;REV__LTBP1|p.R1505Sfs*11|1|0.05|ENSG00000049323|chr2:33364330-33364331|-/TATTACTAAAGAA|frameshift_variant;REV__nc|ENSG00000049323|Q14766-2|LTBP1;REV__nc|ENSG00000049323|Q14766-3|LTBP1;REV__nc|ENSG00000049323|Q14766-4|LTBP1;REV__nc|ENSG00000049323|Q14766-5|LTBP1	13.45404412870281	0.8074920481021843	2				NaN	NaN	0	NaN	11947	5992	17940
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17942	49.727	NaN	10295	30	0	1209.2	0.106				-1	NDMNCNDDGHS	11	76	647.7068419893841	1293.399131045568	2	648.2080688476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_NDM(Oxidation (M))NC(Carbamidomethyl (C))NDDGHS_	ENSG00000151322|ENST00000356141|NPAS3;nc|ENSG00000151322|Q8IXF0-2|NPAS3;nc|ENSG00000151322|Q8IXF0-3|NPAS3;nc|ENSG00000151322|Q8IXF0-4|NPAS3;NPAS3|p.L707Cfs*103|1|0.35|ENSG00000151322|chr14:33800420-33800420|G/-|frameshift_variant	16.71738777980365	0.7922119881075679	2				NaN	NaN	0	NaN	11948	5992	17940
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17943	49.729	NaN	3311.5	30	0	2100.5	0.106				-1	 	0	53	392.7487250531117	783.4828971730234	2	392.74859619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11949	5992	17940
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17944	49.73	NaN	6860.4	30	0	418.19	0.106				-1	 	0	79	698.1967911433989	697.1895146767988	1	700.1986083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11950	5992	17940
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17945	49.732	NaN	1644	30	0	305.36	0.106				-1	SSQRDDSM	8	40	471.1841515801295	940.353750227059	2	471.1840515136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_SSQRDDSM(Oxidation (M))_	ENST00000608287.1_1_10:52349983-52384785:-|nuORF	13.775330524044264	0.789990904165365	2				NaN	NaN	0	NaN	11951	5992	17940
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17946	49.734	NaN	5185.5	30	0	302.41	0.106				-1	 	0	79	713.1791887218436	NaN	0	713.1801147460938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11952	5992	17940
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17947	49.736	NaN	2068.1	30	0	176.01	0.035				-1	DEDGMDCMD	9	49	523.6419008024748	NaN	0	523.6417236328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_DEDGM(Oxidation (M))DCMD_	ENSG00000117020|ENST00000673466|AKT3	3.6843469609004	0.40727630907727536	2				NaN	NaN	0	NaN	11953	5992	17940
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17951	49.75	NaN	36750	30	0	4356.6	0.214				-1	 	0	100	384.2354404092685	766.456327885337	2	384.7369384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11954	5995	17950
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17952	49.753	NaN	8324.9	30	0	404.08	0.106				-1	 	0	77	674.1917010135288	673.1844245469288	1	674.1927490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11955	5995	17950
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17953	49.755	NaN	1579.1	30	0	129.49	0.106	+			13693	GPPGGLLL	8	50	362.2221812715425	NaN	0	362.2222900390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GPPGGLLL_	ENSG00000204060|ENST00000641094|FOXO6;ENST00000372591.1_2_1:41848017-41848350:+|nuORF	24.504012794735996	1.7418937515398478	2				NaN	NaN	0	NaN	11956	5995	17950
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17954	49.757	NaN	1986.3	30	0	524.41	0.106			+	37649	SLQQSCCCC	9	41	487.66341248968	NaN	0	487.6629943847656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLQQSCCCC_	REV__ENST00000392795.7_1_17:62007703-62009599:-|nuORF	16.473147378115264	0.38122769658151995	2				NaN	NaN	0	NaN	11957	5995	17950
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17955	49.759	NaN	6291.1	30	0	510.11	0.106				-1	MTCCFCSFCC	10	77	696.2002085335497	NaN	0	696.1997680664062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	4 Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))TC(Carbamidomethyl (C))CFC(Carbamidomethyl (C))SFC(Carbamidomethyl (C))C(Carbamidomethyl (C))_	ENST00000368170.7_1_1:158259849-158259882:+|nuORF	10.265252068803164	0.42010282974921537	2				NaN	NaN	0	NaN	11958	5995	17950
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17956	49.761	NaN	1609.5	30	0	145.64	0.035				-1	DYDSEDDN	8	46	507.66131105329225	1013.3080691733845	2	507.6612243652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))DYDSEDDN_	ENSG00000106443|ENST00000634607|PHF14;ENST00000490957.5_1_7:11013950-11101713:+|nuORF;nc|ENSG00000106443|O94880-1|PHF14;PHF14|p.M316Wfs*5|1|0.43|ENSG00000106443|chr7:10990743-10990743|A/-|frameshift_variant;PHF14|p.R215Q|1|0.28|ENSG00000106443|chr7:10982903-10982903|G/A|missense_variant	12.206847966760668	0.7875100812264838	2				NaN	NaN	0	NaN	11959	5995	17950
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17960	49.775	NaN	2444.5	30	0	237.5	0.214				-1	CCCPCCHCC	9	53	573.1321352420429	NaN	0	573.1333618164062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	3 Carbamidomethyl (C)	_C(Carbamidomethyl (C))C(Carbamidomethyl (C))CPC(Carbamidomethyl (C))CHCC_	ENSG00000197191|ENST00000650725|CYSRT1	8.822329726475273	0.4071219895973803	2				NaN	NaN	0	NaN	11960	5998	17959
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17961	49.778	NaN	2869.9	30	0	402.9	0.106			+	50207	WLWWHLHVQVR	11	59	520.6175255311167	NaN	0	520.61572265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WLWWHLHVQVR_	REV__ENST00000361229.8_1_X:101976007-102003782:+|nuORF	10.586796910825942	0.456735970842152	2				NaN	NaN	0	NaN	11961	5998	17959
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17962	49.78	NaN	6140.9	30	0	388.1	0.106			+	-1	CCCDDEHDCC	10	77	708.174560546875	NaN	0	708.174560546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term),4 Carbamidomethyl (C)	_(Acetyl (Protein N-term))C(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))DDEHDC(Carbamidomethyl (C))C_	REV__ENSG00000198854|ENST00000368775|C1orf68	0	0.4201028297492154	2				NaN	NaN	0	NaN	11962	5998	17959
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17963	49.782	NaN	3229.1	30	0	147.09	0.043				-1	FGFCCNCFWCF	11	82	802.7821944663234	NaN	0	802.782958984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	4 Carbamidomethyl (C)	_FGFC(Carbamidomethyl (C))C(Carbamidomethyl (C))NC(Carbamidomethyl (C))FWC(Carbamidomethyl (C))F_	L1PA8_dup4178|chr8:94121319-94127043:-|4.057818296907117|0.2856926403965029|3.83|481.0|314|3|anti-sense	0.8280856835056912	0.456735970842152	2				NaN	NaN	0	NaN	11963	5998	17959
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17967	49.796	NaN	36721	30	0	31133	0.214			+	574	ADIDDADAQ	9	53	467.1933076379703	932.3720623427406	2	467.19281005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ADIDDADAQ_	REV__ENSG00000115306|ENST00000356805|SPTBN1;REV__nc|ENSG00000115306|Q01082-2|SPTBN1;REV__nc|ENSG00000115306|Q01082-3|SPTBN1	15.641811463095205	0.6112419832031292	2				NaN	NaN	0	NaN	11964	6001	17966
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17968	49.8	NaN	6720.9	30	0	1469.7	0.106			+	16071	HCCLCCSNSYF	11	69	640.2220177494278	1278.4294825656555	2	640.22216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HCCLCCSNSYF_	REV__ENSG00000104341|ENST00000521545|LAPTM4B;REV__nc|ENSG00000104341|Q86VI4|LAPTM4B	8.693696342081763	0.8297815791940972	2				NaN	NaN	0	NaN	11965	6001	17966
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17969	49.802	NaN	5387.6	30	0	414.42	0.106				-1	 	0	70	698.1967911433989	697.1895146767988	1	698.1978759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11966	6001	17966
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17970	49.804	NaN	4849.4	30	0	441.19	0.106			+	7392	DEDDDEEEQEE	11	84	691.2260944242319	1380.4376359152636	2	691.2244262695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DEDDDEEEQEE_	REV__ENSG00000145041|ENST00000684031|DCAF1;REV__nc|ENSG00000145041|Q9Y4B6-2|DCAF1;REV__nc|ENSG00000145041|Q9Y4B6-3|DCAF1	16.006774744331256	0.795539314609425	2				NaN	NaN	0	NaN	11967	6001	17966
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17971	49.806	NaN	1359.5	30	0	113.21	0.035			+	-1	VEDDECDM	8	46	506.66551507027623	1011.3164772073525	2	506.6644592285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_VEDDEC(Carbamidomethyl (C))DM_	REV__ENSG00000159339|ENST00000375448|PADI4;REV__PADI4|p.P415Qfs*46|1|0.27|ENSG00000159339|chr1:17354616-17354616|C/-|frameshift_variant	8.822329726475273	0.7821568878176242	2				NaN	NaN	0	NaN	11968	6001	17966
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17975	49.82	NaN	9391.8	30	0	2477.3	0.213	+			16583	HGCQDASQRHC	11	70	621.2486905534156	1240.482828173631	2	621.248779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HGCQDASQRHC_	ENST00000304987.3_1_11:111596525-111596654:+|nuORF	28.081489160057373	0.6952392775027776	2				NaN	NaN	0	NaN	11969	6004	17974
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17976	49.823	NaN	9404	30	0	1115.5	0.106			+	30151	PSDDEEEDDED	11	80	647.7068419893841	1293.399131045568	2	647.70654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PSDDEEEDDED_	REV__ENSG00000145725|ENST00000358359|PPIP5K2;REV__nc|ENSG00000145725|O43314-2|PPIP5K2;REV__PPIP5K2|p.L906Cfs*40|1|0.19|ENSG00000145725|chr5:103177941-103177941|T/-|frameshift_variant;REV__PPIP5K2|p.V1179Yfs*3|2|0.15|ENSG00000145725|chr5:103194934-103194934|A/-|frameshift_variant	14.137123925751023	0.8042936413770803	2				NaN	NaN	0	NaN	11970	6004	17974
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17977	49.825	NaN	4309.8	30	0	586.14	0.106				-1	 	0	68	628.2437891803671	627.2365127137671	1	628.2432861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11971	6004	17974
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17978	49.827	NaN	3375.9	30	0	818.76	0.106			+	-1	YGCMCVCM	8	47	491.65196286188535	981.2893727905707	2	491.6520690917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_YGCMCVC(Carbamidomethyl (C))M(Oxidation (M))_	REV__ENST00000409236.6_1_2:100167659-100167914:-|nuORF	10.184766708764876	0.7843118145031319	2				NaN	NaN	0	NaN	11972	6004	17974
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17979	49.829	NaN	2438.6	30	0	272.73	0.106			+	7818	DPSDSDEDS	9	48	483.6601121144084	965.3056712956168	2	483.6626892089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DPSDSDEDS_	REV__ENSG00000167548|ENST00000301067|KMT2D;REV__KMT2D|p.A5076Hfs*2|1|0.12|ENSG00000167548|chr12:49026740-49026740|C/-|frameshift_variant;REV__KMT2D|p.G5182Afs*61|1|0.57|ENSG00000167548|chr12:49026421-49026421|C/-|frameshift_variant;REV__nc|ENSG00000167548|O14686-3|KMT2D	29.14955571784316	0.5308295550522326	2				NaN	NaN	0	NaN	11973	6004	17974
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17980	49.83	NaN	4363.4	30	0	417.92	0.106				-1	 	0	69	590.7352889652864	1179.4560249973727	2	590.7352905273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11974	6004	17974
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17981	49.832	NaN	1297.3	30	0	71.687	0.032			+	33882	RRPAPPGG	8	48	404.2329241571201	806.4512953810403	2	404.2326354980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RRPAPPGG_	REV__ENSG00000272333|ENST00000420124|KMT2B;REV__KMT2B|p.A2538Pfs*76|1|0.42|ENSG00000272333|chr19:35737693-35737693|G/-|frameshift_variant;REV__KMT2B|p.D1589Gfs*89|1|0.28|ENSG00000272333|chr19:35729058-35729059|-/G|frameshift_variant;REV__KMT2B|p.G1199Afs*156|1|0.16|ENSG00000272333|chr19:35725283-35725283|G/-|frameshift_variant;REV__KMT2B|p.G1879Vfs*16|5|0.4|ENSG00000272333|chr19:35732101-35732101|G/-|frameshift_variant;REV__KMT2B|p.G2123Vfs*30|1|0.34|ENSG00000272333|chr19:35732913-35732913|G/-|frameshift_variant;REV__KMT2B|p.L2136Pfs*17|1|0.27|ENSG00000272333|chr19:35732956-35732956|T/-|frameshift_variant;REV__KMT2B|p.P1201Rfs*154|1|0.37|ENSG00000272333|chr19:35725288-35725288|C/-|frameshift_variant;REV__KMT2B|p.P1821Hfs*74|1|0.36|ENSG00000272333|chr19:35731927-35731927|C/-|frameshift_variant;REV__KMT2B|p.R1911Dfs*23|1|0.18|ENSG00000272333|chr19:35732274-35732274|C/-|frameshift_variant;REV__KMT2B|p.S1095L|1|0.14|ENSG00000272333|chr19:35723957-35723957|C/T|missense_variant	15.63621529709179	0.7929342111279789	2				NaN	NaN	0	NaN	11975	6004	17974
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17985	49.846	NaN	12090	30	0	1803.9	0.211				-1	 	0	84	668.186857685372	667.179581218772	1	668.1881713867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11976	6007	17984
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17986	49.85	NaN	11332	30	0	779.28	0.106				-1	MPTSSEMNCSY	11	73	633.2277400354451	1264.44092713769	2	633.2303466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_MPTSSEM(Oxidation (M))NCSY_	ENST00000490746.5_1_2:75749511-75749565:-|nuORF	20.83715455343099	0.7712264395190968	2				NaN	NaN	0	NaN	11977	6007	17984
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17987	49.852	NaN	4418.6	30	0	718.22	0.106				-1	CCMFCTMQ	8	58	491.65196286188535	981.2893727905707	2	491.6518859863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_CCM(Oxidation (M))FCTMQ_	ENSG00000226430|ENST00000530447|USP17L7	17.364965105453717	0.7956685240855921	2				NaN	NaN	0	NaN	11978	6007	17984
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17988	49.854	NaN	3043.6	30	0	1646.9	0.106				-1	 	0	42	436.6796398249814	871.3447267167628	2	436.67962646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11979	6007	17984
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17989	49.855	NaN	4922.5	30	0	862.8	0.106				-1	NQGDETCTHC	10	57	611.2180786602877	1220.4216043873753	2	611.2178344726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C)	_NQGDETC(Carbamidomethyl (C))THC(Carbamidomethyl (C))_	EPHB2|p.A285T|1|0.38|ENSG00000133216|chr1:22863078-22863078|G/A|missense_variant	20.94693142431847	0.7087701759873708	2				NaN	NaN	0	NaN	11980	6007	17984
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17990	49.857	NaN	6546.4	30	0	365.02	0.106				-1	 	0	76	698.1967911433989	697.1895146767988	1	698.1985473632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11981	6007	17984
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17991	49.859	NaN	1500	30	0	142.81	0.035			+	8592	ECCSEPCDD	9	52	500.6366481414259	999.2587433496518	2	500.6394958496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ECCSEPCDD_	REV__CON__P60413;REV__ENSG00000188155|ENST00000400368|KRTAP10-6;REV__ENSG00000189169|ENST00000400365|KRTAP10-12;REV__ENSG00000205445|ENST00000391621|KRTAP10-2;REV__ENSG00000215454|ENST00000400374|KRTAP10-4;REV__ENSG00000221837|ENST00000397911|KRTAP10-9;REV__ENSG00000241123|ENST00000400372|KRTAP10-5;REV__ENSG00000243489|ENST00000334670|KRTAP10-11;REV__ENSG00000272804|ENST00000609664|KRTAP10-7;REV__KRTAP10-12|p.C41Afs*8|1|0.12|ENSG00000189169|chr21:44697316-44697316|C/-|frameshift_variant;REV__KRTAP10-9|p.C31Afs*13|1|0.58|ENSG00000221837|chr21:44627256-44627256|C/-|frameshift_variant	1.2051539316722666	0.6112419832031293	2				NaN	NaN	0	NaN	11982	6007	17984
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17996	49.873	NaN	7065.9	30	0	603.1	0.212			+	-1	MTQCTEGTCFE	11	76	633.2277400354451	1264.44092713769	2	633.7296142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))TQCTEGTCFE_	REV__ENSG00000182208|ENST00000329957|MOB2;REV__nc|ENSG00000182208|Q70IA6-2|MOB2;REV__nc|ENSG00000182208|Q70IA6|MOB2	25.57405402267927	0.7215402271931856	2				NaN	NaN	0	NaN	11984	6010	17995
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17997	49.877	NaN	2269	30	0	1095.4	0.106			+	32567	QVYGGDYG	8	39	429.685385902013	857.3562188708261	2	429.6849670410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QVYGGDYG_	REV__ENSG00000104131|ENST00000261868|EIF3J;REV__nc|ENSG00000104131|O75822-2|EIF3J;REV__nc|ENSG00000104131|O75822-3|EIF3J	12.959181472943097	0.7887000251064199	2				NaN	NaN	0	NaN	11985	6010	17995
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17998	49.879	NaN	4866	30	0	617.4	0.106				-1	KRMCCCTYN	9	67	597.7296208724448	1193.4446888116895	2	597.7293701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_KRM(Oxidation (M))CC(Carbamidomethyl (C))CTYN_	ENSG00000138829|ENST00000262464|FBN2;FBN2|p.D2138Tfs*111|3|0.3|ENSG00000138829|chr5:128290765-128290765|C/-|frameshift_variant;FBN2|p.I2832Sfs*65|1|0.4|ENSG00000138829|chr5:128259700-128259700|T/-|frameshift_variant;FBN2|p.Y2717Lfs*24|1|0.17|ENSG00000138829|chr5:128263469-128263470|-/C|frameshift_variant	14.137123925751023	0.6112419832031292	2				NaN	NaN	0	NaN	11986	6010	17995
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	17999	49.881	NaN	3021.1	30	0	979.9	0.106				-1	TAGMGGGTG	9	62	362.64878569723413	NaN	0	362.6488342285156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_TAGM(Oxidation (M))GGGTG_	tr|U7T4S4|U7T4S4_FUSNUCelldivisionproteinFtsZOS=FusobacteriumnucleatumCTI-5OX=1316586GN=ftsZPE=3SV=1	17.364965105453717	0.37820932774828947	2				NaN	NaN	0	NaN	11987	6010	17995
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18000	49.883	NaN	5178	30	0	542.19	0.106			+	514	ACMGYPCCQYA	11	68	605.2124642944813	1208.4103756557624	2	605.2127685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ACMGYPCCQYA_	REV__ENSG00000133067|ENST00000367278|LGR6;REV__ENST00000487787.5_1_1:202275897-202288332:+|nuORF;REV__nc|ENSG00000133067|Q9HBX8-1|LGR6;REV__nc|ENSG00000133067|Q9HBX8-2|LGR6	27.882242232435846	0.6973292152807183	2				NaN	NaN	0	NaN	11988	6010	17995
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18001	49.884	NaN	7187.6	30	0	615.93	0.106				-1	 	0	76	677.2047876791155	676.1975112125155	1	677.2031860351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11989	6010	17995
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18002	49.886	NaN	7093.2	30	0	500.88	0.04				-1	 	0	80	698.1967911433989	697.1895146767988	1	698.1965942382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11990	6010	17995
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18008	49.903	NaN	8082.4	30	0	667.98	0.212			+	30149	PSDDEDEDEDE	11	70	647.7068419893841	1293.399131045568	2	648.2089233398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PSDDEDEDEDE_	REV__ENST00000596243.5_1_19:50382536-50391878:+|nuORF	25.57405402267927	0.7215402271931856	2				NaN	NaN	0	NaN	11993	6013	18007
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18009	49.906	NaN	3141	30	0	1467.3	0.106				-1	 	0	52	459.2040810752828	916.3936092173656	2	459.2041320800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	11994	6013	18007
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18010	49.908	NaN	2344.1	30	0	826.35	0.106			+	29039	NSVHTGCCM	9	50	476.1780264185166	950.3414999038332	2	476.1795654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NSVHTGCCM_	REV__ENSG00000266967|ENST00000427569|AARSD1;REV__ENST00000441280.7_1_17:41108193-41116457:-|nuORF;REV__ENST00000486664.5_1_17:41107347-41108531:-|nuORF;REV__nc|ENSG00000266967|Q9BTE6-2|AARSD1;REV__nc|ENSG00000266967|Q9BTE6-3|AARSD1	16.473147378115264	0.6112419832031293	2				NaN	NaN	0	NaN	11995	6013	18007
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18011	49.91	NaN	5900.8	30	0	1292.8	0.106			+	-1	YVACVCMHVC	10	67	600.7385786418048	1199.4626043504095	2	600.7388916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_YVACVC(Carbamidomethyl (C))M(Oxidation (M))HVC_	REV__ENST00000505838.1_1_4:103986693-103986825:-|nuORF	26.79610172149135	0.6610034878437611	2				NaN	NaN	0	NaN	11996	6013	18007
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18012	49.912	NaN	8207	30	0	1381.5	0.106				-1	MWCLTCMGKWF	11	89	739.8088358083324	1477.6031186834648	2	739.8060913085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C),Oxidation (M)	_MWC(Carbamidomethyl (C))LTCM(Oxidation (M))GKWF_	ENSG00000168936|ENST00000382936|TMEM129;ENST00000460722.1_1_4:1718909-1719921:-|nuORF;ENST00000476253.1_1_4:1718909-1719614:-|nuORF	36.446750945000026	0.6065623449959539	2				NaN	NaN	0	NaN	11997	6013	18007
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18013	49.913	NaN	5741.2	30	0	1152.5	0.106				-1	AEVVCSGEAAT	11	52	547.2471015877164	1092.4796502422328	2	547.2479858398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_AEVVC(Carbamidomethyl (C))SGEAAT_	ENST00000482993.6_3_10:135267501-135271093:+|nuORF;nc|ENSG00000214279|Q4G0T1-2|SCART1	24.519189625965996	0.7326048944360514	2				NaN	NaN	0	NaN	11998	6013	18007
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18014	49.915	NaN	9818.6	30	0	803.88	0.04			+	-1	HYCQQCQCMDS	11	78	681.2216514243818	1360.4287499155635	2	681.2225341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_HYCQQCQCM(Oxidation (M))DS_	REV__ENST00000318266.9_1_20:2936298-2945537:+|nuORF;REV__ENST00000380393.7_1_20:2903898-2945537:+|nuORF;REV__ENST00000431048.5_1_20:2854325-2945537:+|nuORF	8.693696342081763	0.8297815791940972	2				NaN	NaN	0	NaN	11999	6013	18007
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18018	49.929	NaN	4336.2	30	0	786.52	0.214			+	7093	CVTCETNEQT	10	53	564.2220118125609	1126.4294706919218	2	564.2237548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CVTCETNEQT_	REV__ENSG00000134962|ENST00000257408|KLB	25.57405402267927	0.6709832231498071	2				NaN	NaN	0	NaN	12000	6016	18017
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18019	49.933	NaN	7464.1	30	0	978.77	0.106				-1	CCMSEMNEWD	10	65	660.7040671082907	NaN	0	660.7039794921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_C(Carbamidomethyl (C))CMSEM(Oxidation (M))NEWD_	ENSG00000163625|ENST00000295888|WDFY3;nc|ENSG00000163625|Q8IZQ1-2|WDFY3	10.265252068803164	0.42010282974921537	2				NaN	NaN	0	NaN	12001	6016	18017
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18020	49.935	NaN	6798.6	30	0	635.17	0.106			+	-1	TQPECMSMYS	10	71	633.2277400354451	1264.44092713769	2	633.7294311523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),2 Oxidation (M)	_TQPEC(Carbamidomethyl (C))M(Oxidation (M))SM(Oxidation (M))YS_	REV__ENSG00000125676|ENST00000245838|THOC2;REV__THOC2|p.L784Ffs*4|1|0.3|ENSG00000125676|chrX:123631817-123631818|-/A|frameshift_variant	24.519189625965996	0.6795976720565101	2				NaN	NaN	0	NaN	12002	6016	18017
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18021	49.937	NaN	1962	30	0	184.16	0.106				-1	MPACCSVCC	9	45	495.15636152685704	988.2981701205141	2	495.1567077636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))PACCSVC(Carbamidomethyl (C))C_	ENST00000324607.7_1_6:20152917-20212568:-|nuORF	12.959181472943097	0.6112419832031292	2				NaN	NaN	0	NaN	12003	6016	18017
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18022	49.939	NaN	6193.1	30	0	443.04	0.106			+	-1	SMCREMYWCNM	11	81	771.7689438352629	1541.5233347373257	2	771.7652587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C),2 Oxidation (M)	_SM(Oxidation (M))CREMYWC(Carbamidomethyl (C))NM(Oxidation (M))_	REV__nc|ENSG00000131373|Q9UJ83-3|HACL1	8.693696342081763	0.8297815791940972	2				NaN	NaN	0	NaN	12004	6016	18017
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18023	49.94	NaN	6074.7	30	0	515.74	0.106				-1	 	0	78	691.1691284179688	NaN	0	691.1691284179688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	12005	6016	18017
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18024	49.942	NaN	1423.9	30	0	257.77	0.033				-1	PPCMPCGE	8	36	445.6654991667914	NaN	0	445.6649169921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_PPCMPC(Carbamidomethyl (C))GE_	ENST00000306353.7_2_2:85828206-85829758:-|nuORF;ENST00000425160.1_1_2:85828206-85828698:-|nuORF;ENST00000444380.5_1_2:85828554-85829758:-|nuORF;ENST00000451147.5_1_2:85828554-85828698:-|nuORF;ENST00000455852.1_1_2:85828554-85830202:-|nuORF	9.47055586587303	1.741893751539848	2				NaN	NaN	0	NaN	12006	6016	18017
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18028	49.956	NaN	3082.3	30	0	220.12	0.214				-1	VTSPPGPVCC	10	48	558.2464737748543	NaN	0	558.2457885742188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term),2 Carbamidomethyl (C)	_(Acetyl (Protein N-term))VTSPPGPVC(Carbamidomethyl (C))C(Carbamidomethyl (C))_	ENST00000609439.2_2_7:45808797-45808845:+|nuORF	21.9598887501803	0.4201028297492154	2				NaN	NaN	0	NaN	12007	6019	18027
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18029	49.96	NaN	6105.6	30	0	615.25	0.106				-1	HCCDCYCHSC	10	77	672.6848930395249	NaN	0	672.682373046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	3 Carbamidomethyl (C)	_HC(Carbamidomethyl (C))C(Carbamidomethyl (C))DCYCHSC(Carbamidomethyl (C))_	ENST00000367041.5_1_1:207958419-207963612:+|nuORF;ENST00000471987.1_1_1:207958419-207959036:+|nuORF;ENST00000480003.5_1_1:207958419-207966884:+|nuORF	10.265252068803164	0.42010282974921537	2				NaN	NaN	0	NaN	12008	6019	18027
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18030	49.962	NaN	5573	30	0	419.31	0.106			+	-1	GRCCPFCHCCW	11	81	771.7689438352629	1541.5233347373257	2	772.7670288085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	4 Carbamidomethyl (C)	_GRC(Carbamidomethyl (C))C(Carbamidomethyl (C))PFCHC(Carbamidomethyl (C))C(Carbamidomethyl (C))W_	REV__ENSG00000166351|ENST00000299443|POTED;REV__ENSG00000183206|ENST00000358970|POTEC;REV__ENSG00000187537|ENST00000547848|POTEG;REV__ENSG00000188219|ENST00000683005|POTEE;REV__ENSG00000196604|ENST00000409914|POTEF;REV__ENSG00000196834|ENST00000451531|POTEI;REV__ENSG00000196834|ENST00000451531|POTEI;REV__ENSG00000198062|ENST00000343518|POTEH;REV__ENSG00000198062|ENST00000343518|POTEH;REV__ENSG00000222036|ENST00000547889|POTEM;REV__ENSG00000222038|ENST00000409602|POTEJ;REV__ENSG00000230031|ENST00000454856|POTEB2;REV__ENSG00000233917|ENST00000439682|POTEB;REV__ENSG00000278522|ENST00000611217|POTEB3;REV__nc|ENSG00000187537|Q6S5H5-2|POTEG;REV__nc|ENSG00000187537|Q6S5H5-4|POTEG;REV__nc|ENSG00000188219|Q6S8J3-2|POTEE;REV__nc|ENSG00000188219|Q6S8J3-3|POTEE;REV__nc|ENSG00000198062|Q6S545-2|POTEH;REV__nc|ENSG00000198062|Q6S545-2|POTEH;REV__nc|ENSG00000278522|A0JP26-2|POTEB3;REV__nc|ENSG00000278522|A0JP26-3|POTEB3;REV__POTEC|p.N269Kfs*14|1|0.06|ENSG00000183206|chr18:14537804-14537805|-/T|frameshift_variant;REV__POTEE|p.N792Kfs*34|1|0.2|ENSG00000188219|chr2:131263828-131263829|-/A|frameshift_variant;REV__POTEF|p.N269Tfs*20|1|0.35|ENSG00000196604|chr2:130114885-130114885|T/-|frameshift_variant;REV__POTEF|p.R728Gfs*16|3|0.06|ENSG00000196604|chr2:130075290-130075290|G/-|frameshift_variant;REV__POTEG|p.G121Efs*46|1|0.19|ENSG00000187537|chr14:19433928-19433928|C/-|frameshift_variant;REV__POTEH|p.S133Afs*71|1|0.32|ENSG00000198062|chr22:15690474-15690474|A/-|frameshift_variant	6.31265097734313	0.8409304252590333	2				NaN	NaN	0	NaN	12009	6019	18027
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18031	49.963	NaN	2086.7	30	0	139.03	0.106	+			37163	SIVRLDKGN	9	56	501.2903571880329	1000.5661614428658	2	501.2904357910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SIVRLDKGN_	CELSR2|p.V2171I|1|0.2|ENSG00000143126|chr1:109268888-109268888|G/A|missense_variant	28.081489160057373	0.5408112046645406	2				NaN	NaN	0	NaN	12010	6019	18027
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18032	49.965	NaN	6757	30	0	461.48	0.106				-1	CCCCCCEECIQ	11	83	705.6871243318984	NaN	0	705.6845092773438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	3 Carbamidomethyl (C)	_C(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))CCCEECIQ_	ENSG00000170775|ENST00000303921|GPR37	2.92943323627438	0.456735970842152	2				NaN	NaN	0	NaN	12011	6019	18027
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18033	49.967	NaN	8062.9	30	0	464.42	0.106				-1	MMMMMMMMMM	10	81	689.206504059023	NaN	0	689.2084350585938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	3 Oxidation (M)	_M(Oxidation (M))MMMM(Oxidation (M))MM(Oxidation (M))MMM_	ENST00000429734.1_1_10:97949420-97949504:-|nuORF;ENST00000429734.1_1_10:97949420-97949504:-|nuORF;REV__ENST00000429734.1_1_10:97949420-97949504:-|nuORF;REV__ENST00000429734.1_1_10:97949420-97949504:-|nuORF	12.959181472943097	0.4201028297492154	2				NaN	NaN	0	NaN	12012	6019	18027
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18034	49.969	NaN	4768.1	30	0	389.76	0.043				-1	 	0	82	792.245361328125	NaN	0	792.245361328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	12013	6019	18027
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18038	49.983	NaN	4114.1	30	0	596.43	0.214				-1	 	0	51	336.5341033168387	1006.5804805507162	3	336.53411865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	12014	6022	18037
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18039	49.987	NaN	6222.6	30	0	476.81	0.106				-1	HCCVEMGMDM	10	79	622.6955434204399	1243.3765339076797	2	623.1976928710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),2 Oxidation (M)	_HC(Carbamidomethyl (C))CVEM(Oxidation (M))GM(Oxidation (M))DM_	ADCY5|p.L820Tfs*74|1|0.32|ENSG00000173175|chr3:123304169-123304170|-/G|frameshift_variant;ADCY5|p.N612Kfs*66|1|0.37|ENSG00000173175|chr3:123327729-123327730|-/T|frameshift_variant;ENSG00000173175|ENST00000462833|ADCY5;nc|ENSG00000173175|O95622-2|ADCY5	15.641811463095205	0.7369665665077569	2				NaN	NaN	0	NaN	12015	6022	18037
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18040	49.989	NaN	8155.6	30	0	589.46	0.106				-1	 	0	77	692.1607666015625	NaN	0	692.1607666015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	12016	6022	18037
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18041	49.99	NaN	7745.6	30	0	476.77	0.041			+	-1	HSCCCCCCCSQ	11	76	704.1785278320312	NaN	0	704.1785278320312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	4 Carbamidomethyl (C)	_HSCCC(Carbamidomethyl (C))CC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))SQ_	REV__ENST00000451786.5_1_7:130792823-130793084:-|nuORF;REV__nc|ENSG00000231721|A0A455ZAR2|LINC-PINT	13.45404412870281	0.456735970842152	2				NaN	NaN	0	NaN	12017	6022	18037
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18045	50.005	NaN	4392.5	30	0	376.14	0.213				-1	DACDSCPEMSN	11	68	622.6955434204399	1243.3765339076797	2	623.1981811523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_DAC(Carbamidomethyl (C))DSCPEM(Oxidation (M))SN_	ENSG00000169231|ENST00000368378|THBS3;ENST00000428962.2_1_1:155168428-155169890:-|nuORF;nc|ENSG00000169231|P49746-2|THBS3	13.45404412870281	0.8074920481021843	2				NaN	NaN	0	NaN	12018	6025	18044
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18046	50.008	NaN	6938.2	30	0	439.99	0.106				-1	 	0	71	674.1917010135288	673.1844245469288	1	674.1893920898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	12019	6025	18044
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18047	50.01	NaN	1278.2	30	0	112.53	0.106			+	-1	NTNGGGSSMT	10	36	471.1841515801295	940.353750227059	2	471.18463134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_NTNGGGSSM(Oxidation (M))T_	REV__ENSG00000198728|ENST00000673968|LDB1;REV__nc|ENSG00000198728|Q86U70-2|LDB1;REV__nc|ENSG00000198728|Q86U70-3|LDB1	16.006774744331256	0.7351120747673535	2				NaN	NaN	0	NaN	12020	6025	18044
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18048	50.012	NaN	6560	30	0	335.26	0.106				-1	 	0	79	717.1736450195312	NaN	0	717.1736450195312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	12021	6025	18044
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18049	50.014	NaN	1711.7	30	0	93.541	0.106	+			17183	HTRALLQG	8	59	448.2592072140053	894.5038614948106	2	448.2587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HTRALLQG_	ENST00000327158.4_1_17:904373-904769:+|nuORF	19.359975847455235	0.7988239741663654	2				NaN	NaN	0	NaN	12022	6025	18044
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18050	50.015	NaN	1179.1	30	0	211.97	0.106				-1	CPVCFSCC	8	37	488.16259765625	NaN	0	488.16259765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Carbamidomethyl (C)	_CPVCFSC(Carbamidomethyl (C))C(Carbamidomethyl (C))_	ENST00000513868.6_1_8:129001487-129082505:+|nuORF	14.664097394203935	1.7418937515398478	2				NaN	NaN	0	NaN	12023	6025	18044
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18051	50.017	NaN	4896.3	30	0	337.1	0.041				-1	 	0	80	711.6762868065115	NaN	0	711.67431640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	12024	6025	18044
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18055	50.031	NaN	8510.7	30	0	718.52	0.213			+	-1	HCCGSAHSCEM	11	68	647.7068419893841	1293.399131045568	2	648.2083129882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C),Oxidation (M)	_HC(Carbamidomethyl (C))CGSAHSC(Carbamidomethyl (C))EM(Oxidation (M))_	REV__ENSG00000145041|ENST00000684031|DCAF1;REV__nc|ENSG00000145041|Q9Y4B6-2|DCAF1	14.137123925751023	0.8042936413770803	2				NaN	NaN	0	NaN	12025	6028	18054
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18056	50.035	NaN	6384.1	30	0	484.73	0.106				-1	 	0	75	674.1917010135288	673.1844245469288	1	674.1900024414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	12026	6028	18054
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18057	50.037	NaN	4719.3	30	0	238.9	0.041				-1	 	0	77	714.6800537109375	NaN	0	714.6800537109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	12027	6028	18054
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18061	50.051	NaN	3162.6	30	0	313.69	0.213				-1	CCEHCGEYMP	10	70	622.6955434204399	1243.3765339076797	2	623.1973266601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_CCEHC(Carbamidomethyl (C))GEYM(Oxidation (M))P_	ENSG00000132950|ENST00000337963|ZMYM5;ENST00000382909.5_1_13:20398619-20425669:-|nuORF;nc|ENSG00000132950|Q9UJ78-5|ZMYM5;ZMYM5|p.I456*|1|0.35|ENSG00000132950|chr13:19825121-19825121|T/-|frameshift_variant;ZMYM5|p.I456Nfs*43|1|0.22|ENSG00000132950|chr13:19825120-19825121|-/T|frameshift_variant;ZMYM5|p.K463Rfs*11|1|0.43|ENSG00000132950|chr13:19825099-19825099|T/-|frameshift_variant	6.735540347417125	0.7822220951348577	2				NaN	NaN	0	NaN	12028	6031	18060
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18062	50.054	NaN	4862.9	30	0	346.16	0.106				-1	 	0	78	727.1616821289062	NaN	0	727.1616821289062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	12029	6031	18060
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18063	50.056	NaN	5830.3	30	0	310.3	0.106			+	-1	EECCCCCCEM	10	83	720.6780395507812	NaN	0	720.6780395507812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	5 Carbamidomethyl (C)	_EEC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))CEM_	REV__ENSG00000170775|ENST00000303921|GPR37	10.865556482863946	0.4201028297492154	2				NaN	NaN	0	NaN	12030	6031	18060
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18064	50.058	NaN	1888.5	30	0	242.85	0.106			+	31523	QLIRSWVRYRR	11	49	511.6337486027038	NaN	0	511.634033203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QLIRSWVRYRR_	REV__ENSG00000171045|ENST00000524325|TSNARE1;REV__nc|ENSG00000171045|Q96NA8-2|TSNARE1	5.698786898958082	0.456735970842152	2				NaN	NaN	0	NaN	12031	6031	18060
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18065	50.06	NaN	4091.5	30	0	252.52	0.042				-1	 	0	79	760.6487426757812	NaN	0	760.6487426757812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	12032	6031	18060
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18069	50.074	NaN	6386.1	30	0	456.81	0.211				-1	ETCCPCCCCP	10	80	673.6895592917031	NaN	0	673.6893920898438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	5 Carbamidomethyl (C)	_ETC(Carbamidomethyl (C))C(Carbamidomethyl (C))PC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))CP_	ENST00000599649.5_1_19:52149845-52150035:-|nuORF	12.206847966760668	0.4201028297492154	2				NaN	NaN	0	NaN	12033	6034	18068
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18070	50.078	NaN	716.12	30	0	115.87	0.106			+	29884	PLLCKLHR	8	32	327.2012483250285	NaN	0	327.10858154296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PLLCKLHR_	REV__MSTB_dup6501|chr13:43061603-43061850:-|1.279567223268373|0.2367443632259002|2.43|470.0|9|3|sense	13.775330524044264	1.7418937515398478	2				NaN	NaN	0	NaN	12034	6034	18068
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18071	50.08	NaN	2192.8	30	0	289.91	0.106				-1	 	0	59	519.1164919386983	NaN	0	519.117919921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	12035	6034	18068
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18072	50.081	NaN	2688.2	30	0	242.73	0.106				-1	PSCMDEEC	8	54	493.64906866034295	985.2835843874859	2	493.64923095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_PSC(Carbamidomethyl (C))M(Oxidation (M))DEEC_	ENSG00000010818|ENST00000367603|HIVEP2;HIVEP2|p.E2269Sfs*37|1|0.07|ENSG00000010818|chr6:142753643-142753643|C/-|frameshift_variant;HIVEP2|p.N2325Kfs*44|1|0.35|ENSG00000010818|chr6:142753473-142753474|-/T|frameshift_variant	8.822329726475273	0.7821568878176242	2				NaN	NaN	0	NaN	12036	6034	18068
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18073	50.083	NaN	2388.7	30	0	388.5	0.106			+	-1	FDACDCDC	8	51	503.140625	NaN	0	503.140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C)	_FDAC(Carbamidomethyl (C))DCDC(Carbamidomethyl (C))_	REV__ENSG00000213139|ENST00000307944|CRYGS	13.775330524044264	1.7418937515398478	2				NaN	NaN	0	NaN	12037	6034	18068
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18074	50.085	NaN	1362.9	30	0	337.09	0.106				-1	AYRMAKPDH	9	42	368.84793400490236	NaN	0	368.84796142578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_AYRM(Oxidation (M))AKPDH_	PDGFRA|p.G912A|1|0.36|ENSG00000134853|chr4:54288859-54288859|G/C|missense_variant	35.61828744233558	0.29773779453147337	2				NaN	NaN	0	NaN	12038	6034	18068
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18075	50.087	NaN	2229.4	30	0	223.85	0.037	+			28242	NDEGNDEDHS	10	55	566.19287109375	NaN	0	566.19287109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NDEGNDEDHS_	ENSG00000106443|ENST00000634607|PHF14;ENST00000490957.5_1_7:11013950-11101713:+|nuORF;nc|ENSG00000106443|O94880-1|PHF14;PHF14|p.M316Wfs*5|1|0.43|ENSG00000106443|chr7:10990743-10990743|A/-|frameshift_variant	17.468008924990375	0.4201028297492154	2				NaN	NaN	0	NaN	12039	6034	18068
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18079	50.101	NaN	5254.2	30	0	509.87	0.212			+	-1	MECMTEPTCD	10	69	653.2077112479735	1304.400869562747	2	653.7090454101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C),2 Oxidation (M)	_M(Oxidation (M))EC(Carbamidomethyl (C))M(Oxidation (M))TEPTC(Carbamidomethyl (C))D_	REV__ENSG00000177728|ENST00000314256|TMEM94;REV__ENST00000581867.1_1_17:73491396-73492246:+|nuORF;REV__ENST00000585105.5_1_17:73489877-73495164:+|nuORF;REV__KIAA0195|p.H1145Ifs*95|1|0.14|ENSG00000177728|chr17:75497800-75497800|C/-|frameshift_variant;REV__nc|ENSG00000177728|Q12767-2|TMEM94;REV__nc|ENSG00000177728|Q12767-3|TMEM94	6.31265097734313	0.7843709273166888	2				NaN	NaN	0	NaN	12040	6037	18078
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18080	50.104	NaN	5206.6	30	0	370.01	0.041				-1	 	0	76	712.1754150390625	NaN	0	712.1754150390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	12041	6037	18078
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18085	50.119	NaN	5188.9	30	0	641.77	0.211				-1	 	0	75	668.186857685372	667.179581218772	1	668.1867065429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	12043	6040	18084
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18086	50.123	NaN	6998.2	30	0	529.99	0.106			+	-1	HNYPCNDCCD	10	73	649.2065162164984	1296.3984794997966	2	649.7086791992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_HNYPC(Carbamidomethyl (C))NDC(Carbamidomethyl (C))CD_	REV__THBS1|p.R773C|1|0.27|ENSG00000137801|chr15:39591254-39591254|C/T|missense_variant	15.641811463095205	0.7369665665077569	2				NaN	NaN	0	NaN	12044	6040	18084
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18087	50.125	NaN	5138.5	30	0	260.17	0.106				-1	 	0	81	686.171142578125	NaN	0	686.171142578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	12045	6040	18084
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18088	50.126	NaN	1847.4	30	0	259.71	0.106			+	32818	RAWDCTCC	8	45	479.1725008169064	956.3304487006128	2	479.1719665527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RAWDCTCC_	REV__nc|ENSG00000165782|Q86T03-3|PIP4P1	8.231297230196988	0.7812220690224883	2				NaN	NaN	0	NaN	12046	6040	18084
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18089	50.128	NaN	2027.2	30	0	188.79	0.106				-1	 	0	65	545.3169303467929	1088.6193077603857	2	545.8200073242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	12047	6040	18084
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18090	50.13	NaN	5085.7	30	0	401.39	0.106			+	-1	CCNFCCCLCC	10	78	700.1958618164062	NaN	0	700.1958618164062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	5 Carbamidomethyl (C)	_C(Carbamidomethyl (C))C(Carbamidomethyl (C))NFC(Carbamidomethyl (C))C(Carbamidomethyl (C))CLC(Carbamidomethyl (C))C_	REV__ENSG00000101152|ENST00000360864|DNAJC5;REV__nc|ENSG00000101152|Q9H3Z4-2|DNAJC5	7.690282842768113	0.42010282974921537	2				NaN	NaN	0	NaN	12048	6040	18084
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18091	50.132	NaN	3704.6	30	0	240.81	0.041				-1	 	0	77	737.6503295898438	NaN	0	737.6503295898438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	12049	6040	18084
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18095	50.146	NaN	3026.4	30	0	1937	0.214			+	32183	QSSSSPPED	9	40	467.1933076379703	932.3720623427406	2	467.1930236816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QSSSSPPED_	REV__ENSG00000137216|ENST00000323267|TMEM63B	16.473147378115264	0.6112419832031293	2				NaN	NaN	0	NaN	12050	6043	18094
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18096	50.15	NaN	4694.3	30	0	558.59	0.106				-1	 	0	68	640.2220177494278	1278.4294825656555	2	640.7232055664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	12051	6043	18094
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18097	50.151	NaN	4357.1	30	0	283.71	0.04				-1	 	0	77	674.1917010135288	673.1844245469288	1	674.19091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	12052	6043	18094
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18101	50.166	NaN	2970.2	30	0	252.17	0.213			+	-1	CVPVCCRSQSC	11	67	621.2486905534156	1240.482828173631	2	621.249267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_CVPVCCRSQSC(Carbamidomethyl (C))_	REV__ENSG00000254997|ENST00000528743|KRTAP5-9	17.468008924990375	0.788697330333842	2				NaN	NaN	0	NaN	12053	6046	18100
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18102	50.169	NaN	2171.4	30	0	138.22	0.106				-1	MFLFFCCN	8	61	590.7352889652864	1179.4560249973727	2	590.7359008789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term),2 Carbamidomethyl (C)	_(Acetyl (Protein N-term))MFLFFC(Carbamidomethyl (C))C(Carbamidomethyl (C))N_	ENST00000523094.5_2_5:157213433-157213547:-|nuORF	15.63621529709179	0.7929342111279789	2				NaN	NaN	0	NaN	12054	6046	18100
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18103	50.171	NaN	1279.3	30	0	113.18	0.106			+	50604	YDQGCCFM	8	46	483.6601121144084	965.3056712956168	2	484.1637878417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YDQGCCFM_	REV__ENSG00000042781|ENST00000307340|USH2A;REV__nc|ENSG00000042781|O75445-3|USH2A;REV__USH2A|p.E5096Gfs*82|1|0.44|ENSG00000042781|chr1:215634469-215634470|-/C|frameshift_variant;REV__USH2A|p.T3753Lfs*31|1|0.37|ENSG00000042781|chr1:215758727-215758727|T/-|frameshift_variant	12.959181472943097	0.7887000251064199	2				NaN	NaN	0	NaN	12055	6046	18100
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18104	50.173	NaN	3590.7	30	0	193.36	0.041				-1	 	0	71	715.1790161132812	NaN	0	715.1790161132812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	12056	6046	18100
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18108	50.187	NaN	1717.8	30	0	298.83	0.214	+			17455	ICFTCSCCC	9	41	491.65188857528943	981.2892242173789	2	491.65106201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ICFTCSCCC_	ENSG00000164054|ENST00000296444|SHISA5;ENST00000460758.1_1_3:48511100-48514492:-|nuORF;ENST00000465449.5_1_3:48510508-48514931:-|nuORF;ENST00000466424.5_1_3:48509548-48511229:-|nuORF;ENST00000494854.5_1_3:48510739-48514492:-|nuORF;nc|ENSG00000164054|Q8N114-2|SHISA5;nc|ENSG00000164054|Q8N114-3|SHISA5;nc|ENSG00000164054|Q8N114-4|SHISA5;nc|ENSG00000164054|Q8N114-5|SHISA5	3.9852391341785527	0.6112419832031293	2				NaN	NaN	0	NaN	12057	6049	18107
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18109	50.19	NaN	2264.8	30	0	479.11	0.106				-1	YAFFECKR	8	43	374.1795236251527	NaN	0	374.1796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_YAFFEC(Carbamidomethyl (C))KR_	ENSG00000183513|ENST00000328709|COA5;ENST00000466848.1_1_2:99217217-99222254:-|nuORF;ENST00000483527.5_1_2:99217217-99224734:-|nuORF	25.450171626174864	1.7418937515398478	2				NaN	NaN	0	NaN	12058	6049	18107
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18110	50.192	NaN	2446.9	30	0	169.55	0.038				-1	 	0	67	628.2437891803671	627.2365127137671	1	628.2434692382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	12059	6049	18107
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18114	50.207	NaN	4253.2	30	0	290.22	0.212			+	-1	SPDQCEDMDFC	11	76	653.2077112479735	1304.400869562747	2	653.2080688476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_SPDQCEDM(Oxidation (M))DFC_	REV__ENSG00000049323|ENST00000404816|LTBP1;REV__LTBP1|p.R1505Sfs*11|1|0.05|ENSG00000049323|chr2:33364330-33364331|-/TATTACTAAAGAA|frameshift_variant;REV__nc|ENSG00000049323|Q14766-2|LTBP1;REV__nc|ENSG00000049323|Q14766-3|LTBP1;REV__nc|ENSG00000049323|Q14766-4|LTBP1;REV__nc|ENSG00000049323|Q14766-5|LTBP1	13.45404412870281	0.8074920481021843	2				NaN	NaN	0	NaN	12060	6052	18113
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18115	50.21	NaN	984.02	30	0	72.256	0.031	+			25011	LLGGRLLGQSA	11	52	362.2220640479694	NaN	0	362.221923828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LLGGRLLGQSA_	ENSG00000182871|ENST00000651438|COL18A1;ENST00000473212.1_1_21:46927018-46932309:+|nuORF;nc|ENSG00000182871|P39060-1|COL18A1;nc|ENSG00000182871|P39060|COL18A1	27.882242232435846	0.44115667141176046	2				NaN	NaN	0	NaN	12061	6052	18113
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18119	50.224	NaN	5465.9	30	0	514.82	0.214	+			49908	VYTTNTILL	9	67	519.2977465855895	1036.580940237979	2	519.2975463867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYTTNTILL_	DSC2|p.A800Lfs*56|1|0.25|ENSG00000134755|chr18:31069004-31069004|C/-|frameshift_variant;DSC2|p.T412Pfs*8|1|0.47|ENSG00000134755|chr18:31082267-31082267|T/-|frameshift_variant;ENSG00000134755|ENST00000280904|DSC2;nc|ENSG00000134755|Q02487-2|DSC2	75.04331003522576	0.118981335847003	2				NaN	NaN	0	NaN	12062	6055	18118
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18120	50.228	NaN	5613.8	30	0	384.66	0.106			+	30152	PSDDEEEDDED	11	70	647.7068419893841	1293.399131045568	2	648.207275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PSDDEEEDDED_	REV__ENSG00000145725|ENST00000358359|PPIP5K2;REV__nc|ENSG00000145725|O43314-2|PPIP5K2;REV__PPIP5K2|p.L906Cfs*40|1|0.19|ENSG00000145725|chr5:103177941-103177941|T/-|frameshift_variant;REV__PPIP5K2|p.V1179Yfs*3|2|0.15|ENSG00000145725|chr5:103194934-103194934|A/-|frameshift_variant	19.996771675451527	0.7768568223548057	2				NaN	NaN	0	NaN	12063	6055	18118
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18121	50.23	NaN	6698.7	30	0	484.96	0.04				-1	GSNCDEECMNC	11	81	667.687953119571	NaN	0	667.687744140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C),Oxidation (M)	_GSNCDEEC(Carbamidomethyl (C))M(Oxidation (M))NC(Carbamidomethyl (C))_	COL26A1|p.S218Lfs*131|1|0.12|ENSG00000160963|chr7:101544035-101544035|C/-|frameshift_variant;ENSG00000160963|ENST00000313669|COL26A1;nc|ENSG00000160963|Q96A83-2|COL26A1	4.338815125287529	0.456735970842152	2				NaN	NaN	0	NaN	12064	6055	18118
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18125	50.244	NaN	1618	30	0	114.19	0.214	+			50933	YGVKAIIQPG	10	61	523.3041460154153	NaN	0	523.303955078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YGVKAIIQPG_	tr|U7SU44|U7SU44_FUSNUBifunctionalpurinebiosynthesisproteinPurHOS=FusobacteriumnucleatumCTI-5OX=1316586GN=purHPE=3SV=1	21.9598887501803	0.4201028297492154	2				NaN	NaN	0	NaN	12065	6058	18124
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18126	50.247	NaN	3858.1	30	0	212.4	0.041				-1	CCCFCCCCCF	10	79	711.6744384765625	NaN	0	711.6744384765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	5 Carbamidomethyl (C)	_C(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))FC(Carbamidomethyl (C))CCCC(Carbamidomethyl (C))F_	ENSG00000163793|ENST00000296097|DNAJC5G	7.690282842768113	0.42010282974921537	2				NaN	NaN	0	NaN	12066	6058	18124
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18130	50.262	NaN	5741.8	30	0	432.77	0.145			+	-1	WCGACSEHCV	10	79	633.2277400354451	1264.44092713769	2	633.2268676757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	3 Carbamidomethyl (C)	_WC(Carbamidomethyl (C))GAC(Carbamidomethyl (C))SEHC(Carbamidomethyl (C))V_	REV__ENSG00000138759|ENST00000512123|FRAS1;REV__FRAS1|p.C3202Afs*11|1|0.32|ENSG00000138759|chr4:78508825-78508825|C/-|frameshift_variant;REV__FRAS1|p.G3456Afs*3|1|0.28|ENSG00000138759|chr4:78515987-78515987|G/-|frameshift_variant;REV__FRAS1|p.P3289Lfs*45|1|0.05|ENSG00000138759|chr4:78511358-78511359|-/T|frameshift_variant;REV__FRAS1|p.V2385Sfs*37|1|0.28|ENSG00000138759|chr4:78466329-78466329|G/-|frameshift_variant;REV__nc|ENSG00000138759|Q86XX4-4|FRAS1;REV__nc|ENSG00000138759|Q86XX4-5|FRAS1;REV__nc|ENSG00000138759|Q86XX4-6|FRAS1;REV__nc|ENSG00000138759|Q86XX4|FRAS1	21.9598887501803	0.7004979571547932	2				NaN	NaN	0	NaN	12067	6061	18129
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18137	50.293	NaN	4142.1	30	0	261.56	0.212				-1	SNCQMEDMTM	10	74	647.7068419893841	1293.399131045568	2	648.208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),3 Oxidation (M)	_SNC(Carbamidomethyl (C))QM(Oxidation (M))EDM(Oxidation (M))TM(Oxidation (M))_	ENSG00000103994|ENST00000564754|ZNF106;nc|ENSG00000103994|Q9H2Y7|ZNF106;ZNF106|p.S482Pfs*33|1|0.22|ENSG00000103994|chr15:42450759-42450759|A/-|frameshift_variant	12.811709888998246	0.7513471912541434	2				NaN	NaN	0	NaN	12068	6067	18136
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18138	50.297	NaN	3668.5	30	0	249.35	0.04				-1	 	0	73	686.1692504882812	NaN	0	686.1692504882812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	12069	6067	18136
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18145	50.327	NaN	3446.1	30	0	649.94	0.214				-1	 	0	43	336.5341033168387	1006.5804805507162	3	336.5341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	12070	6073	18144
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18146	50.33	NaN	1215.7	30	0	93.003	0.035	+			28513	NIARVNLTT	9	49	501.2903571880329	1000.5661614428658	2	501.29119873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NIARVNLTT_	ENSG00000102837|ENST00000219022|OLFM4	20.83715455343099	0.6085133616046181	2				NaN	NaN	0	NaN	12071	6073	18144
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18150	50.348	NaN	3840.6	30	0	388.85	0.212				-1	DGTMCGPEMYC	11	73	648.206298828125	NaN	0	648.206298828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),2 Oxidation (M)	_DGTM(Oxidation (M))C(Carbamidomethyl (C))GPEM(Oxidation (M))YC_	ENSG00000168619|ENST00000265707|ADAM18;nc|ENSG00000168619|Q9Y3Q7-2|ADAM18	14.137123925751023	0.456735970842152	2				NaN	NaN	0	NaN	12072	6076	18149
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18151	50.351	NaN	2098.7	30	0	303	0.035	+			17456	ICFTCSCCC	9	56	491.65188857528943	981.2892242173789	2	491.6518249511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ICFTCSCCC_	ENSG00000164054|ENST00000296444|SHISA5;ENST00000460758.1_1_3:48511100-48514492:-|nuORF;ENST00000465449.5_1_3:48510508-48514931:-|nuORF;ENST00000466424.5_1_3:48509548-48511229:-|nuORF;ENST00000494854.5_1_3:48510739-48514492:-|nuORF;nc|ENSG00000164054|Q8N114-2|SHISA5;nc|ENSG00000164054|Q8N114-3|SHISA5;nc|ENSG00000164054|Q8N114-4|SHISA5;nc|ENSG00000164054|Q8N114-5|SHISA5	8.231297230196988	0.6112419832031293	2				NaN	NaN	0	NaN	12073	6076	18149
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18176	50.477	NaN	1001.2	30	0	120.15	0.14				-1	 	0	37	380.20740703340283	379.20013056680284	1	380.206298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	12074	6100	18175
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18192	50.558	NaN	1140.6	30	0	96.588	0.141			+	33888	RRPPTGPA	8	51	426.2461497851075	850.477746637015	2	426.2456359863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RRPPTGPA_	REV__ENSG00000171794|ENST00000304477|UTF1	14.664097394203935	0.7913966407026132	2				NaN	NaN	0	NaN	12075	6115	18191
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18199	50.591	NaN	1949.7	30	0	182.01	0.143			+	24783	LIFLYIYT	8	59	523.3041460154153	NaN	0	523.304443359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LIFLYIYT_	REV__ENST00000531971.1_1_11:118656990-118657077:-|nuORF	23.036711822280957	1.7418937515398478	2				NaN	NaN	0	NaN	12076	6121	18198
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18206	50.624	NaN	1872.5	30	0	975.03	0.141	+			33834	RRAAVAPQ	8	38	434.75917687512606	867.5038008170521	2	434.7585754394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RRAAVAPQ_	ENSG00000126254|ENST00000262633|RBM42	13.775330524044264	0.789990904165365	2				NaN	NaN	0	NaN	12077	6127	18205
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18216	50.673	NaN	3642.8	30	0	611.78	0.214				-1	 	0	36	336.5341033168387	1006.5804805507162	3	336.5342712402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	12078	6136	18215
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18217	50.677	NaN	1632.9	30	0	274.44	0.036			+	-1	LVLSTYGVPV	10	47	545.3154296875	NaN	0	545.3154296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LVLSTYGVPV_	REV__ENSG00000160753|ENST00000368352|RUSC1;REV__nc|ENSG00000160753|Q9BVN2-2|RUSC1;REV__nc|ENSG00000160753|Q9BVN2-3|RUSC1;REV__nc|ENSG00000160753|Q9BVN2-4|RUSC1	30.503639358989545	0.4000169810673414	2				NaN	NaN	0	NaN	12079	6136	18215
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18239	50.788	NaN	1485.3	30	0	269.27	0.142			+	44239	TRTISRVP	8	51	465.28011164684364	928.5456703604873	2	465.27972412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TRTISRVP_	REV__ENSG00000101333|ENST00000378473|PLCB4;REV__ENST00000492632.5_1_20:9288449-9449247:+|nuORF;REV__nc|ENSG00000101333|Q15147-4|PLCB4;REV__nc|ENSG00000101333|Q15147-5|PLCB4;REV__nc|ENSG00000101333|Q15147|PLCB4;REV__PLCB4|p.E494Rfs*4|1|0.26|ENSG00000101333|chr20:9395586-9395587|-/A|frameshift_variant;REV__PLCB4|p.I229Nfs*7|1|0.22|ENSG00000101333|chr20:9372395-9372396|-/A|frameshift_variant;REV__PLCB4|p.P887Lfs*31|1|0.08|ENSG00000101333|chr20:9437081-9437081|C/-|frameshift_variant	18.324413293986947	0.7971860551947066	2				NaN	NaN	0	NaN	12080	6157	18238
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18243	50.804	NaN	2120.9	30	0	371.54	0.14	+			47598	VRRLPGGG	8	48	406.2487030861171	810.4828532390342	2	406.2481994628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VRRLPGGG_	ENST00000497505.5_1_2:203879615-203880929:+|nuORF	15.63621529709179	0.7929342111279789	2				NaN	NaN	0	NaN	12081	6160	18242
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18250	50.836	NaN	1075	30	0	92.777	0.214			+	13424	GLGPASAL	8	40	343.19761571410726	NaN	0	343.1974792480469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GLGPASAL_	REV__ENSG00000091483|ENST00000366560|FH	21.70233525837049	1.7418937515398478	2				NaN	NaN	0	NaN	12082	6166	18249
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18251	50.839	NaN	2141.3	30	0	787.55	0.032			+	49068	VVKGRRGG	8	48	414.76206044448253	827.5095679557651	2	414.7616882324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVKGRRGG_	REV__ENSG00000198420|ENST00000479870|TCAF1;REV__ENST00000392900.3_1_7:143551228-143582358:-|nuORF;REV__nc|ENSG00000198420|Q9Y4C2-2|TCAF1	14.664097394203935	0.7913966407026132	2				NaN	NaN	0	NaN	12083	6166	18249
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18264	50.901	NaN	840.63	30	0	82.516	0.139	+			18091	IKNSRIEPK	9	41	362.22228410894706	NaN	0	362.22210693359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IKNSRIEPK_	HERVH-int_dup4763|chr13:43060101-43060646:-|1.1455265893349995|0.1694828300693424|2.76|471.0|2|1|sense	23.04248740728303	0.3589936788096251	2				NaN	NaN	0	NaN	12084	6178	18263
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18271	50.933	NaN	1218.4	30	0	107.54	0.143	+			5355	ATVTVTLRQG	10	49	523.3041546182666	1044.593756303333	2	523.3036499023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATVTVTLRQG_	ENSG00000110013|ENST00000263593|SIAE;ENST00000436137.2_1_11:124530361-124543691:-|nuORF;nc|ENSG00000110013|Q9HAT2-2|SIAE	24.519189625965996	0.6795976720565101	2				NaN	NaN	0	NaN	12085	6184	18270
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18275	50.949	NaN	514.49	30	0	92.418	0.143			+	7496	DGKKKHIY	8	29	330.1909700580434	NaN	0	330.19097900390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DGKKKHIY_	REV__tr|U7T232|U7T232_FUSNUMethylenetetrahydrofolatereductaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00452PE=3SV=1	11.511019455917149	1.7418937515398478	2				NaN	NaN	0	NaN	12086	6187	18274
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18285	50.997	NaN	2428.8	30	0	327.22	0.145	+			18189	IMAVILGIFGT	11	60	567.8321784723763	NaN	0	567.83251953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IMAVILGIFGT_	ENSG00000084628|ENST00000373736|NKAIN1;ENST00000533581.1_1_1:31658018-31661124:-|nuORF	16.473147378115264	0.456735970842152	2				NaN	NaN	0	NaN	12087	6196	18284
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18289	51.013	NaN	2962.7	30	0	363.72	0.143				-1	 	0	33	336.5341033168387	1006.5804805507162	3	336.53424072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	12088	6199	18288
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18302	51.077	NaN	1115.6	30	0	123.2	0.142	+			45894	VAPRAVGVGN	10	50	470.27213315631116	938.5297133794223	2	470.271240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VAPRAVGVGN_	ENST00000592881.1_1_19:56146495-56146537:+|nuORF	21.9598887501803	0.7004979571547932	2				NaN	NaN	0	NaN	12089	6211	18301
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18309	51.109	NaN	1765.7	30	0	232.25	0.144	+			2012	AKLLQSTKSN	10	59	545.316802856378	1088.619052779556	2	545.3167724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AKLLQSTKSN_	ENSG00000250374|ENST00000503032|TRIM75	29.170058357718403	0.6416167986984785	2				NaN	NaN	0	NaN	12090	6217	18308
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18316	51.141	NaN	1092.4	30	0	118.69	0.14				-1	 	0	50	406.2487030861171	810.4828532390342	2	406.2486267089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	12091	6223	18315
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18323	51.173	NaN	1458.5	30	0	73.976	0.14			+	37255	SLAAAVYL	8	57	404.23217676913373	NaN	0	404.2327575683594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLAAAVYL_	REV__ENST00000290759.8_1_15:76634172-76634577:+|nuORF	23.036711822280957	1.7418937515398478	2				NaN	NaN	0	NaN	12092	6229	18322
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18357	51.348	NaN	3130.1	30	0	693.73	0.143				-1	 	0	38	336.5341033168387	1006.5804805507162	3	336.53411865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	12093	6262	18356
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18379	51.459	NaN	2286	30	0	205.61	0.144			+	28589	NKKVSEEKK	9	71	545.3169300677721	1088.619307202344	2	545.3172607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NKKVSEEKK_	REV__MAP1B|p.D769N|1|0.08|ENSG00000131711|chr5:72195660-72195660|G/A|missense_variant	21.9598887501803	0.5980208138527809	2				NaN	NaN	0	NaN	12094	6283	18378
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18398	51.554	NaN	2630.5	30	0	480.53	0.145	+			12260	GAVDGDIT	8	48	374.1790621912219	NaN	0	374.17926025390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GAVDGDIT_	USH2A|p.T701A|1|0.43|ENSG00000042781|chr1:216250969-216250969|T/C|missense_variant	20.481830146152948	1.741893751539848	2				NaN	NaN	0	NaN	12095	6301	18397
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18402	51.57	NaN	2419.2	30	0	228.34	0.144	+			6701	AYVLNIVRF	9	52	547.8219598134845	NaN	0	547.8231811523438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AYVLNIVRF_	ATP1B1|p.L184Hfs*6|1|0.09|ENSG00000143153|chr1:169127391-169127392|-/A|frameshift_variant;ENSG00000143153|ENST00000367815|ATP1B1;nc|ENSG00000143153|P05026-2|ATP1B1	60.11826168202944	0.14881452885248947	2				NaN	NaN	0	NaN	12096	6304	18401
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18406	51.586	NaN	1538.5	30	0	82.992	0.14			+	32695	RAGPRPAG	8	55	391.2250386893422	780.4355244454845	2	391.2249450683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RAGPRPAG_	REV__UBE2O|p.T8Rfs*128|1|0.18|ENSG00000175931|chr17:76453121-76453121|G/-|frameshift_variant	14.664097394203935	0.7913966407026132	2				NaN	NaN	0	NaN	12097	6307	18405
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18422	51.665	NaN	1388.6	30	0	122.52	0.141			+	47417	VPPPSRSR	8	53	448.25904757424433	894.5035422152887	2	448.25848388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VPPPSRSR_	REV__ENSG00000161547|ENST00000359995|SRSF2;REV__nc|ENSG00000161547|Q01130-2|SRSF2	30.503639358989545	0.7238069182250283	2				NaN	NaN	0	NaN	12098	6322	18421
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18429	51.698	NaN	3414.3	30	0	652.5	0.144				-1	 	0	47	336.5341033168387	1006.5804805507162	3	336.5342102050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	12099	6328	18428
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18433	51.714	NaN	2309.3	30	0	849.62	0.214	+			22974	KVRHKSAS	8	42	456.7723131428634	911.5300733525269	2	456.7721252441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVRHKSAS_	ENSG00000100207|ENST00000677622|TCF20;nc|ENSG00000100207|Q9UGU0-2|TCF20	21.9598887501803	0.7897753010812679	2				NaN	NaN	0	NaN	12100	6331	18432
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18434	51.717	NaN	1926.5	30	0	269.62	0.037	+			23325	KYRVEKAARG	10	62	589.3432453646589	1176.6719377961176	2	589.3430786132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KYRVEKAARG_	ENSG00000171773|ENST00000301944|NXNL1	23.52269567125451	0.6877354443478558	2				NaN	NaN	0	NaN	12101	6331	18432
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18441	51.747	NaN	1322.6	30	0	152.63	0.142	+			6842	CILQTLGII	9	55	487.2928393852441	NaN	0	487.2928161621094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CILQTLGII_	MER65-int_dup830|chr19:41731202-41731711:+|2.2615833292983227|0.0105726313913534|7.74|478.0|4|1|sense	31.954861631926434	0.3162336699109506	2				NaN	NaN	0	NaN	12102	6337	18440
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18451	51.795	NaN	2019.2	30	0	203.59	0.144	+			9351	EIRKIQTTT	9	65	545.3169300677721	1088.619307202344	2	545.3171997070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EIRKIQTTT_	ENSG00000172915|ENST00000379939|NBEA;NBEA|p.V2250Lfs*10|1|0.36|ENSG00000172915|chr13:35550967-35550967|A/-|frameshift_variant;nc|ENSG00000172915|Q8NFP9|NBEA	24.519189625965996	0.574102787014149	2				NaN	NaN	0	NaN	12103	6346	18450
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18455	51.811	NaN	893.79	30	0	301.16	0.214				-1	 	0	26	326.14352889612366	650.2725048590473	2	326.1434326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	12104	6349	18454
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18456	51.815	NaN	1298.4	30	0	187.77	0.034	+			35424	SARPHCSPC	9	35	479.20470058833024	956.3948482434605	2	479.204345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SARPHCSPC_	ENST00000463784.5_1_5:131822753-131826344:-|nuORF;ENST00000493208.1_1_5:131825145-131826395:-|nuORF	19.996771675451527	0.6112419832031292	2				NaN	NaN	0	NaN	12105	6349	18454
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18463	51.845	NaN	1426.9	30	0	195.35	0.214				-1	 	0	45	334.16478934233703	666.3150257514741	2	334.164794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	12106	6355	18462
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18464	51.848	NaN	1872.7	30	0	623.18	0.106				-1	 	0	44	326.1758738067785	650.337194680357	2	326.17608642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	12107	6355	18462
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18465	51.85	NaN	1626.6	30	0	240.74	0.037				-1	AYCPPRFPP	9	57	368.84773487075773	NaN	0	368.8472595214844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_AYC(Carbamidomethyl (C))PPRFPP_	ENSG00000115155|ENST00000272371|OTOF;nc|ENSG00000115155|Q9HC10-2|OTOF;nc|ENSG00000115155|Q9HC10-3|OTOF;nc|ENSG00000115155|Q9HC10-4|OTOF;nc|ENSG00000115155|Q9HC10-5|OTOF;OTOF|p.E1062K|1|0.41|ENSG00000115155|chr2:26474617-26474617|C/T|missense_variant;OTOF|p.N1149Rfs*28|1|0.56|ENSG00000115155|chr2:26473530-26473531|-/C|frameshift_variant	37.15910966729921	0.2899585034171616	2				NaN	NaN	0	NaN	12108	6355	18462
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18472	51.88	NaN	2814.5	30	0	472.32	0.214			+	43391	TGGHSCNNPS	10	54	487.19316231283756	NaN	0	487.1926574707031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TGGHSCNNPS_	REV__ENSG00000101384|ENST00000254958|JAG1;REV__nc|ENSG00000101384|P78504-2|JAG1	32.81241826257853	0.3924360933802784	2				NaN	NaN	0	NaN	12109	6361	18471
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18473	51.883	NaN	3303.7	30	0	386.89	0.035			+	-1	CIEDTMACS	9	59	494.6763610839844	NaN	0	494.6763610839844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_CIEDTM(Oxidation (M))ACS_	REV__ENSG00000171109|ENST00000471841|MFN1;REV__ENST00000480636.1_1_3:179094944-179096278:+|nuORF;REV__nc|ENSG00000171109|Q8IWA4-3|MFN1	17.364965105453717	0.37820932774828947	2				NaN	NaN	0	NaN	12110	6361	18471
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18477	51.897	NaN	7537	30	0	879.06	0.215				-1	 	0	71	327.1707084691511	652.3268640051023	2	327.1705322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	12111	6364	18476
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18478	51.901	NaN	2732	30	0	979.58	0.032			+	-1	GGSCDSTT	8	38	392.64230364929085	783.2700543653817	2	392.6422424316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GGSC(Carbamidomethyl (C))DSTT_	REV__ENST00000565875.5_1_15:66857042-66858257:-|nuORF	13.775330524044264	0.789990904165365	2				NaN	NaN	0	NaN	12112	6364	18476
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18482	51.915	NaN	4196.5	30	0	655.61	0.214			+	-1	GEERCPFV	8	52	497.2268756175796	992.4391983019592	2	497.22662353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GEERC(Carbamidomethyl (C))PFV_	REV__ENST00000563307.1_1_16:58194742-58195162:-|nuORF	42.47446043378293	0.6409579893742323	2				NaN	NaN	0	NaN	12113	6367	18481
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18483	51.919	NaN	6224.9	30	0	2641.9	0.106	+			12860	GEQGITGPSGP	11	58	500.2422746720424	998.4699964108848	2	500.2434997558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEQGITGPSGP_	ENSG00000130635|ENST00000371817|COL5A1;nc|ENSG00000130635|P20908-2|COL5A1	32.75053402867276	0.6462648045997152	2				NaN	NaN	0	NaN	12114	6367	18481
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18484	51.921	NaN	7282.6	30	0	794.61	0.106			+	18398	IRPIRSGG	8	71	428.2617211536172	854.5088893740344	2	428.26153564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IRPIRSGG_	REV__ENST00000237536.8_2_20:35410688-35410808:-|nuORF	19.359975847455235	0.7988239741663654	2				NaN	NaN	0	NaN	12115	6367	18481
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18485	51.923	NaN	1966.6	30	0	361.81	0.106				-1	 	0	53	339.6495684408415	677.284583948483	2	339.6499328613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	12116	6367	18481
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18486	51.924	NaN	2814.4	30	0	311.67	0.106				-1	VGGNCRHC	8	51	480.20037841796875	NaN	0	480.20037841796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C)	_VGGNC(Carbamidomethyl (C))RHC(Carbamidomethyl (C))_	TLR9|p.R257H|1|0.14|ENSG00000239732|chr3:52223546-52223546|C/T|missense_variant	28.2542754592877	1.7418937515398478	2				NaN	NaN	0	NaN	12117	6367	18481
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18487	51.926	NaN	2147.6	30	0	531.71	0.106			+	-1	KILGTRMM	8	32	483.26809727187026	964.5216416105405	2	483.77008056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_KILGTRM(Oxidation (M))M_	REV__ENSG00000185532|ENST00000373980|PRKG1;REV__nc|ENSG00000185532|Q13976|PRKG1	12.206847966760668	0.7875100812264838	2				NaN	NaN	0	NaN	12118	6367	18481
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18488	51.928	NaN	872.24	30	0	107.76	0.033			+	6759	CEEMGADD	8	27	435.1376037597656	NaN	0	435.1376037597656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_CEEMGADD_	REV__ENST00000549335.5_1_12:105433559-105443704:-|nuORF	8.822329726475273	1.7418937515398478	2				NaN	NaN	0	NaN	12119	6367	18481
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18492	51.942	NaN	4903.4	30	0	1239.4	0.214				-1	 	0	64	436.7748549878224	871.5351570424448	2	436.774658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	12120	6370	18491
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18493	51.945	NaN	3429.6	30	0	926.92	0.037	+			23503	LAGLVSGE	8	59	373.20969550123067	NaN	0	373.21002197265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LAGLVSGE_	ENST00000484380.2_1_14:74755361-74755529:-|nuORF;ENST00000534953.1_1_12:133768360-133778745:+|nuORF;ENST00000588312.2_1_12:133758227-133778745:+|nuORF;nc|ENSG00000090612|Q14587-8|ZNF268	28.2542754592877	1.7418937515398478	2				NaN	NaN	0	NaN	12121	6370	18491
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18497	51.96	NaN	3193.1	30	0	1080.2	0.142			+	24848	LKAVDLSGY	9	40	483.26809727187026	964.5216416105405	2	483.7696533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LKAVDLSGY_	REV__ANK2|p.E1746*|1|0.07|ENSG00000145362|chr4:113353848-113353849|-/C|frameshift_variant;REV__ANK2|p.N1476Mfs*12|1|0.21|ENSG00000145362|chr4:113350244-113350244|A/-|frameshift_variant;REV__ANK2|p.R2581Efs*5|1|0.41|ENSG00000145362|chr4:113356352-113356353|-/A|frameshift_variant;REV__ENSG00000145362|ENST00000357077|ANK2;REV__nc|ENSG00000145362|Q01484-2|ANK2;REV__nc|ENSG00000145362|Q01484-5|ANK2	24.519189625965996	0.574102787014149	2				NaN	NaN	0	NaN	12122	6373	18496
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18501	51.976	NaN	4873.9	30	0	828.24	0.214	+			12203	GAQGGPCP	8	48	343.6499793709387	685.2854058086774	2	343.65081787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GAQGGPCP_	ENST00000396076.5_1_12:21810468-21810579:-|nuORF	14.664097394203935	0.7913966407026132	2				NaN	NaN	0	NaN	12123	6376	18500
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18502	51.979	NaN	6091.2	30	0	659.36	0.106				-1	WKQYMSGSAVD	11	63	644.28662109375	NaN	0	644.28662109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_WKQYM(Oxidation (M))SGSAVD_	ENSG00000159433|ENST00000290607|STARD9	16.006774744331256	0.456735970842152	2				NaN	NaN	0	NaN	12124	6376	18500
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18503	51.981	NaN	2716	30	0	361.76	0.106				-1	CCGTCHYR	8	54	528.6917724609375	NaN	0	528.6917724609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))CGTC(Carbamidomethyl (C))HYR_	ENSG00000187902|ENST00000376325|SHISA7	26.79610172149135	1.7418937515398478	2				NaN	NaN	0	NaN	12125	6376	18500
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18504	51.983	NaN	1768.9	30	0	275.17	0.106			+	9245	EGVESCDPAGA	11	46	517.7078466922092	NaN	0	517.7072143554688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EGVESCDPAGA_	REV__ENSG00000168016|ENST00000645898|TRANK1;REV__nc|ENSG00000168016|O15050|TRANK1;REV__TRANK1|p.F2073Lfs*13|1|0.1|ENSG00000168016|chr3:36833232-36833232|A/-|frameshift_variant;REV__TRANK1|p.P972Qfs*12|1|0.34|ENSG00000168016|chr3:36856675-36856675|G/-|frameshift_variant;REV__TRANK1|p.V1077Wfs*30|1|0.29|ENSG00000168016|chr3:36856362-36856362|T/-|frameshift_variant	20.94693142431847	0.456735970842152	2				NaN	NaN	0	NaN	12126	6376	18500
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18505	51.985	NaN	3772	30	0	547.64	0.036			+	-1	ADCCCQMKT	9	60	538.189208984375	NaN	0	538.189208984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C),Oxidation (M)	_ADCCC(Carbamidomethyl (C))QM(Oxidation (M))KT_	REV__ENSG00000166147|ENST00000316623|FBN1	17.364965105453717	0.37820932774828947	2				NaN	NaN	0	NaN	12127	6376	18500
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18509	51.999	NaN	2984.6	30	0	442.08	0.145	+			24765	LIAHKRTHTG	10	69	567.3302297301261	1132.6459065270521	2	567.3298950195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LIAHKRTHTG_	ENSG00000130803|ENST00000247956|ZNF317;ENST00000590152.1_1_19:9267931-9272106:+|nuORF;ENST00000591278.5_1_19:9268612-9272106:+|nuORF;nc|ENSG00000130803|Q96PQ6-2|ZNF317;nc|ENSG00000130803|Q96PQ6-3|ZNF317;nc|ENSG00000130803|Q96PQ6-4|ZNF317;ZNF317|p.E359Rfs*51|1|0.42|ENSG00000130803|chr19:9160716-9160716|G/-|frameshift_variant;ZNF317|p.L487Pfs*6|1|0.3|ENSG00000130803|chr19:9161101-9161104|TATT/-|frameshift_variant	24.519189625965996	0.6795976720565101	2				NaN	NaN	0	NaN	12128	6379	18508
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18513	52.015	NaN	1967.7	30	0	444.25	0.138				-1	 	0	31	342.15113993827504	682.2877269433501	2	342.1513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	12129	6382	18512
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18517	52.031	NaN	982.22	30	0	163.57	0.144			+	16749	HLQSKKTF	8	35	330.1909700580434	NaN	0	330.1907043457031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HLQSKKTF_	REV__ENSG00000127081|ENST00000375495|ZNF484;REV__ENSG00000147124|ENST00000684689|ZNF41;REV__nc|ENSG00000127081|Q5JVG2-2|ZNF484;REV__nc|ENSG00000127081|Q5JVG2-3|ZNF484;REV__nc|ENSG00000147124|P51814-2|ZNF41;REV__nc|ENSG00000147124|P51814-3|ZNF41;REV__nc|ENSG00000147124|P51814-4|ZNF41;REV__nc|ENSG00000147124|P51814-5|ZNF41;REV__nc|ENSG00000147124|P51814-7|ZNF41;REV__nc|ENSG00000147124|P51814-8|ZNF41;REV__nc|ENSG00000147124|P51814|ZNF41	27.882242232435846	1.7418937515398478	2				NaN	NaN	0	NaN	12130	6385	18516
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18521	52.047	NaN	3543.5	30	0	631.78	0.143				-1	 	0	47	336.5341033168387	1006.5804805507162	3	336.53424072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	12131	6388	18520
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18531	52.095	NaN	2455.4	30	0	432.6	0.143			+	50882	YFLVVVML	8	50	492.2853280725246	NaN	0	492.28485107421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YFLVVVML_	REV__ENSG00000186881|ENST00000334726|OR13F1	19.359975847455235	1.7418937515398478	2				NaN	NaN	0	NaN	12132	6397	18530
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18544	52.158	NaN	2190	30	0	343.82	0.214	+			559	ADGAHTGG	8	36	343.14947037893256	684.2843878246651	2	343.15130615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ADGAHTGG_	ENST00000435287.1_1_6:132272117-132398394:+|nuORF	13.775330524044264	0.789990904165365	2				NaN	NaN	0	NaN	12133	6409	18543
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18545	52.161	NaN	3777.7	30	0	522.41	0.036	+			43500	TGRLLKLSSD	10	59	545.3169300677721	1088.619307202344	2	545.3164672851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TGRLLKLSSD_	ENSG00000159708|ENST00000329956|LRRC36;nc|ENSG00000159708|Q1X8D7-2|LRRC36;nc|ENSG00000159708|Q1X8D7-3|LRRC36	26.063383197487333	0.6669871633831898	2				NaN	NaN	0	NaN	12134	6409	18543
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18552	52.191	NaN	2300.2	30	0	362.46	0.214				-1	 	0	53	334.16476796771127	666.3149830022226	2	334.1648254394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	12135	6415	18551
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18553	52.195	NaN	1549.2	30	0	297.92	0.03				-1	 	0	44	326.17588686349217	650.3372207937844	2	326.6773681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	12136	6415	18551
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18581	52.335	NaN	2262.1	30	0	137.04	0.145			+	46995	VKSKTLKESN	10	69	567.3302297301261	1132.6459065270521	2	567.3303833007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VKSKTLKESN_	REV__ENSG00000166401|ENST00000397985|SERPINB8;REV__nc|ENSG00000166401|P50452-3|SERPINB8	22.579656572578934	0.6954366826851017	2				NaN	NaN	0	NaN	12137	6442	18580
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18591	52.382	NaN	2638.8	30	0	463.86	0.143				-1	 	0	52	336.5341033168387	1006.5804805507162	3	336.5344543457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	12138	6451	18590
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18616	52.509	NaN	2507.3	30	0	452.33	0.213			+	-1	KALLMNKLKM	10	66	611.3565775386089	1220.6986021440177	2	611.3564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_KALLM(Oxidation (M))NKLKM(Oxidation (M))_	REV__ENSG00000174206|ENST00000398055|KICS2	26.69291269510374	0.6618461711292317	2				NaN	NaN	0	NaN	12139	6475	18615
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18617	52.513	NaN	1750.7	30	0	307.82	0.037	+			12044	FYQYLEEI	8	45	368.8475036621094	NaN	0	368.8475036621094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FYQYLEEI_	tr|U7SF12|U7SF12_FUSNUCRISPRsystemCmsproteinCsm2OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02354PE=3SV=1	26.79610172149135	1.7418937515398478	2				NaN	NaN	0	NaN	12140	6475	18615
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18630	52.574	NaN	1517.9	30	0	107.53	0.144				-1	RSICPLFY	8	55	549.2763116239598	1096.5380703147196	2	549.2770385742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))RSIC(Carbamidomethyl (C))PLFY_	ENSG00000176204|ENST00000409884|LRRTM4;LRRTM4|p.K327N|1|0.17|ENSG00000176204|chr2:77518888-77518888|C/A|missense_variant;LRRTM4|p.K327T|1|0.51|ENSG00000176204|chr2:77518889-77518889|T/G|missense_variant;LRRTM4|p.K469Rfs*9|1|0.19|ENSG00000176204|chr2:77518463-77518463|T/-|frameshift_variant;nc|ENSG00000176204|Q86VH4-2|LRRTM4	29.841539824830324	0.7289191502596711	2				NaN	NaN	0	NaN	12141	6487	18629
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18634	52.59	NaN	1540.4	30	0	257.67	0.143	+			33304	RGRARGVVF	9	55	509.3060830324656	1016.5976131317312	2	509.3058776855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RGRARGVVF_	ENST00000400436.6_1_20:37075363-37075684:+|nuORF;ENST00000440918.5_1_20:37075363-37076627:+|nuORF;ENST00000449351.5_1_20:37075363-37077305:+|nuORF;ENST00000453698.5_1_20:37075363-37076212:+|nuORF	24.20275056022122	0.577060078256802	2				NaN	NaN	0	NaN	12142	6490	18633
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18650	52.669	NaN	1920.1	30	0	304.95	0.145			+	17053	HQPRRQRR	8	61	567.3302841114466	NaN	0	567.3302001953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HQPRRQRR_	REV__ENST00000296575.7_1_4:145567307-145567847:+|nuORF	25.450171626174864	1.7418937515398478	2				NaN	NaN	0	NaN	12143	6505	18649
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18654	52.686	NaN	1644.7	30	0	152.88	0.145	+			19023	IWRRAGGRLH	10	62	611.3565775386089	1220.6986021440177	2	611.8577270507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IWRRAGGRLH_	ENSG00000101213|ENST00000542869|PTK6	21.9598887501803	0.7004979571547932	2				NaN	NaN	0	NaN	12144	6508	18653
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18661	52.717	NaN	3557.7	30	0	777.39	0.214				-1	 	0	37	336.5341033168387	1006.5804805507162	3	336.53424072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	12145	6514	18660
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18662	52.721	NaN	1922	30	0	143.71	0.032	+			1572	AGHGRLSK	8	49	413.238054906598	NaN	0	413.2380676269531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AGHGRLSK_	ENST00000216181.9_1_22:36745290-36784030:-|nuORF	16.473147378115264	1.7418937515398478	2				NaN	NaN	0	NaN	12146	6514	18660
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18666	52.735	NaN	571.55	30	0	38.906	0.14			+	29661	PGLRGGVR	8	41	406.2479569352314	NaN	0	406.2480163574219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PGLRGGVR_	REV__nc|ENSG00000254536|Q6QHF9-4|PAOX	20.481830146152948	1.741893751539848	2				NaN	NaN	0	NaN	12147	6517	18665
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18676	52.783	NaN	2906.5	30	0	256.14	0.145	+			33610	RLRPGSELHL	10	65	589.3430993334335	1176.671645733667	2	589.3432006835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RLRPGSELHL_	ENSG00000152223|ENST00000282041|EPG5;ENST00000587262.1_1_18:43435450-43438580:-|nuORF	19.1035232394073	0.7193765342308498	2				NaN	NaN	0	NaN	12148	6526	18675
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18689	52.846	NaN	1835.5	30	0	215.6	0.145	+			25635	LQRALHDKQL	10	59	611.3565775386089	1220.6986021440177	2	611.356201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LQRALHDKQL_	ENSG00000131018|ENST00000367255|SYNE1;ENST00000367256.9_1_6:152443573-152639413:-|nuORF;ENST00000489156.1_1_6:152599163-152623219:-|nuORF;nc|ENSG00000131018|Q8NF91-2|SYNE1;nc|ENSG00000131018|Q8NF91-4|SYNE1;nc|ENSG00000131018|Q8NF91-8|SYNE1;SYNE1|p.G6773Wfs*7|1|0.44|ENSG00000131018|chr6:152236186-152236187|-/A|frameshift_variant;SYNE1|p.K6871Rfs*22|2|0.52|ENSG00000131018|chr6:152233881-152233881|T/-|frameshift_variant;SYNE1|p.L8283Pfs*8|1|0.19|ENSG00000131018|chr6:152148173-152148174|-/G|frameshift_variant;SYNE1|p.V8635Sfs*12|1|0.15|ENSG00000131018|chr6:152133375-152133375|T/-|frameshift_variant	19.1035232394073	0.7193765342308498	2				NaN	NaN	0	NaN	12149	6538	18688
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18699	52.893	NaN	3280.2	30	0	405.57	0.214	+			18129	ILGLGDRR	8	52	450.2747544845599	898.5349560359198	2	450.27435302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ILGLGDRR_	ATM|p.H2872R|1|0.36|ENSG00000149311|chr11:108347309-108347309|A/G|missense_variant	28.2542754592877	0.7411748056684583	2				NaN	NaN	0	NaN	12150	6547	18698
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18700	52.897	NaN	1531	30	0	568.26	0.034	+			43716	TKRVVRSA	8	49	458.7880400299126	915.5615271266253	2	458.7877502441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TKRVVRSA_	ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;nc|ENSG00000184110|Q99613-2|EIF3C	30.503639358989545	0.7238069182250283	2				NaN	NaN	0	NaN	12151	6547	18698
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18731	53.052	NaN	3252.5	30	0	713.92	0.143				-1	 	0	45	336.5341033168387	1006.5804805507162	3	336.5341491699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	12152	6577	18730
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18747	53.132	NaN	2302.2	30	0	179	0.146	+			21908	KRSSHHLSLL	10	63	589.3430993334335	1176.671645733667	2	589.8440551757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KRSSHHLSLL_	ENST00000585457.5_1_17:42259005-42264009:-|nuORF;ENST00000591166.1_1_17:42259005-42263988:-|nuORF	18.262085536374414	0.7236521404371882	2				NaN	NaN	0	NaN	12153	6592	18746
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18766	53.228	NaN	2449.7	30	0	340.81	0.145			+	-1	IKEALVLHPVM	11	68	633.3687803387679	1264.7230077443357	2	633.369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_IKEALVLHPVM(Oxidation (M))_	REV__ENST00000491898.5_1_6:43023457-43023601:-|nuORF	24.519189625965996	0.7326048944360514	2				NaN	NaN	0	NaN	12154	6610	18765
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18800	53.402	NaN	2945	30	0	542.7	0.143				-1	 	0	40	336.5341033168387	1006.5804805507162	3	336.5343933105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	12155	6643	18799
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18813	53.465	NaN	1652.2	30	0	152.19	0.215			+	29573	PFGLTSKLAK	10	61	531.3193260898537	NaN	0	531.3199462890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PFGLTSKLAK_	REV__ENSG00000048707|ENST00000620676|VPS13D;REV__nc|ENSG00000048707|Q5THJ4-2|VPS13D	21.9598887501803	0.4201028297492154	2				NaN	NaN	0	NaN	12156	6655	18812
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18814	53.469	NaN	700.09	30	0	145.95	0.035	+			38014	SPLTRWTK	8	30	330.1909700580434	NaN	0	330.1907653808594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SPLTRWTK_	AXIN2|p.A292Cfs*10|1|0.29|ENSG00000168646|chr17:65549602-65549603|-/A|frameshift_variant;AXIN2|p.G406Rfs*53|1|0.23|ENSG00000168646|chr17:65537820-65537821|-/CT|frameshift_variant;AXIN2|p.G665Afs*24|4|0.35|ENSG00000168646|chr17:65536467-65536467|C/-|frameshift_variant;AXIN2|p.L191*|1|0.37|ENSG00000168646|chr17:65558049-65558049|A/-|frameshift_variant;AXIN2|p.L349Sfs*25|1|0.78|ENSG00000168646|chr17:65541469-65541470|-/A|frameshift_variant;AXIN2|p.L499Pfs*129|1|0.24|ENSG00000168646|chr17:65537540-65537541|-/G|frameshift_variant;AXIN2|p.L688*|1|0.4|ENSG00000168646|chr17:65536399-65536399|G/-|frameshift_variant;AXIN2|p.L688Pfs*19|1|0.25|ENSG00000168646|chr17:65536398-65536399|-/G|frameshift_variant;AXIN2|p.N666Qfs*41|2|0.51|ENSG00000168646|chr17:65536466-65536467|-/C|frameshift_variant;AXIN2|p.R256Efs*13|1|0.55|ENSG00000168646|chr17:65557856-65557857|-/A|frameshift_variant;AXIN2|p.S303Ifs*3|1|0.59|ENSG00000168646|chr17:65549570-65549571|-/A|frameshift_variant;AXIN2|p.T125Sfs*10|1|0.28|ENSG00000168646|chr17:65558231-65558247|TACTCGTAAAGTTTTGG/-|frameshift_variant;AXIN2|p.T97Ffs*43|1|0.23|ENSG00000168646|chr17:65558332-65558333|TT/-|frameshift_variant;ENSG00000168646|ENST00000307078|AXIN2;ENST00000577662.1_1_17:63534239-63554825:-|nuORF	21.9598887501803	1.7418937515398478	2				NaN	NaN	0	NaN	12157	6655	18812
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18836	53.58	NaN	2192.1	30	0	148.31	0.145			+	-1	VKVFCPFLVL	10	65	611.356761717891	1220.698970502582	2	611.3571166992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_VKVFC(Carbamidomethyl (C))PFLVL_	REV__ENST00000475582.5_1_2:27591237-27591477:-|nuORF	16.473147378115264	0.7327422906225664	2				NaN	NaN	0	NaN	12158	6676	18835
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18843	53.611	NaN	1130.7	30	0	59.569	0.143			+	13906	GRKGTLPPAS	10	51	492.2855126132842	982.5564722933684	2	492.2850036621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GRKGTLPPAS_	REV__ENSG00000100105|ENST00000266269|PATZ1;REV__nc|ENSG00000100105|Q9HBE1-2|PATZ1;REV__nc|ENSG00000100105|Q9HBE1-3|PATZ1;REV__nc|ENSG00000100105|Q9HBE1-4|PATZ1;REV__PATZ1|p.G285Pfs*14|1|0.11|ENSG00000100105|chr22:31344749-31344750|CC/-|frameshift_variant	29.550750289552195	0.6385079145554603	2				NaN	NaN	0	NaN	12159	6682	18842
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18868	53.739	NaN	3511.1	30	0	639.04	0.143				-1	 	0	41	336.5341033168387	1006.5804805507162	3	336.5345153808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	12160	6706	18867
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18875	53.77	NaN	1714.7	30	0	207.3	0.141			+	28924	NRGKPALN	8	48	435.251103552757	868.487654172314	2	435.250244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NRGKPALN_	REV__ENSG00000256061|ENST00000321149|DNAAF4;REV__ENST00000565113.5_1_15:55681617-55790527:-|nuORF;REV__ENST00000568310.1_1_15:55677902-55790527:-|nuORF;REV__nc|ENSG00000256061|Q8WXU2-2|DNAAF4;REV__nc|ENSG00000256061|Q8WXU2-3|DNAAF4	26.79610172149135	0.7524337208463756	2				NaN	NaN	0	NaN	12161	6712	18874
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18891	53.851	NaN	1014.1	30	0	243.49	0.14	+			45834	VAKLLNISQPL	11	40	399.2505276023452	NaN	0	399.2509765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VAKLLNISQPL_	ENSG00000213973|ENST00000596209|ZNF99	19.262678746197807	0.456735970842152	2				NaN	NaN	0	NaN	12162	6727	18890
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18898	53.883	NaN	3844.9	30	0	408.52	0.214	+			29192	NVLLRKSGG	9	66	472.2879529626597	942.5613529921194	2	472.2874755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NVLLRKSGG_	ENST00000525729.5_2_11:108264081-108276170:-|nuORF	29.14955571784316	0.5308295550522326	2				NaN	NaN	0	NaN	12163	6733	18897
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18899	53.886	NaN	1548	30	0	359.7	0.034	+			9479	EKRGKKSK	8	52	480.80091841300185	959.5872838928037	2	480.8006896972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EKRGKKSK_	ENSG00000072195|ENST00000312358|SPEG;nc|ENSG00000072195|Q15772-1|SPEG;SPEG|p.E351K|1|0.32|ENSG00000072195|chr2:219448209-219448209|G/A|missense_variant;SPEG|p.G628Vfs*92|1|0.31|ENSG00000072195|chr2:219449034-219449034|C/-|frameshift_variant;SPEG|p.M1971Wfs*268|1|0.31|ENSG00000072195|chr2:219483369-219483369|C/-|frameshift_variant;SPEG|p.P2584Qfs*35|1|0.09|ENSG00000072195|chr2:219488198-219488198|C/-|frameshift_variant;SPEG|p.Q2233Rfs*6|2|0.25|ENSG00000072195|chr2:219484154-219484154|C/-|frameshift_variant;SPEG|p.R1307Gfs*12|1|0.34|ENSG00000072195|chr2:219472303-219472303|C/-|frameshift_variant;SPEG|p.R2315Qfs*8|1|0.31|ENSG00000072195|chr2:219484399-219484400|-/C|frameshift_variant;SPEG|p.R3177Pfs*3|1|0.2|ENSG00000072195|chr2:219492170-219492171|-/G|frameshift_variant;SPEG|p.S1915Vfs*324|1|0.21|ENSG00000072195|chr2:219483200-219483200|C/-|frameshift_variant;SPEG|p.T870Hfs*52|1|0.36|ENSG00000072195|chr2:219462042-219462043|-/C|frameshift_variant;SPEG|p.T870Pfs*11|1|0.35|ENSG00000072195|chr2:219462043-219462043|C/-|frameshift_variant	29.14955571784316	0.7342621283720113	2				NaN	NaN	0	NaN	12164	6733	18897
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18906	53.918	NaN	2801.7	30	0	357.65	0.145			+	-1	RLMSKVLIVM	10	74	611.356761717891	1220.698970502582	2	611.35595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_RLM(Oxidation (M))SKVLIVM(Oxidation (M))_	REV__CAMKK1|p.T446M|1|0.2|ENSG00000004660|chr17:3869491-3869491|G/A|missense_variant	27.882242232435846	0.6521336255503853	2				NaN	NaN	0	NaN	12165	6739	18905
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18931	54.045	NaN	802.21	30	0	165.49	0.143	+			19027	IWTGAVVSR	9	33	330.1909700580434	NaN	0	330.1912841796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IWTGAVVSR_	ENST00000462826.1_1_7:150499254-150499470:+|nuORF	24.519189625965996	0.35377483217337163	2				NaN	NaN	0	NaN	12166	6763	18930
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18938	54.077	NaN	3184.8	30	0	657.08	0.143				-1	 	0	37	336.5341033168387	1006.5804805507162	3	336.5339050292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	12167	6769	18937
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18972	54.253	NaN	1627.7	30	0	127.13	0.145	+			43554	THQKTHTIKK	10	57	611.356761717891	1220.698970502582	2	611.3560791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_THQKTHTIKK_	ZNF175|p.R359I|1|0.15|ENSG00000105497|chr19:51587407-51587407|G/T|missense_variant	40.77816245573522	0.5419747034533848	2				NaN	NaN	0	NaN	12168	6802	18971
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18982	54.302	NaN	1724.5	30	0	223.17	0.144	+			44191	TRARSLRFV	9	61	553.3325958183897	1104.6506387035793	2	553.3326416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TRARSLRFV_	ACP2|p.L293Rfs*89|1|0.29|ENSG00000134575|chr11:47243102-47243102|A/-|frameshift_variant;ENSG00000134575|ENST00000672073|ACP2;ENST00000444355.5_1_11:47267202-47270343:-|nuORF;ENST00000529788.2_1_11:47269122-47270343:-|nuORF;ENST00000534448.5_1_11:47269480-47270343:-|nuORF;nc|ENSG00000134575|P11117-2|ACP2	21.9598887501803	0.5980208138527809	2				NaN	NaN	0	NaN	12169	6811	18981
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	18998	54.382	NaN	2551.9	30	0	159.75	0.145				-1	KVKFMKTIPGT	11	75	633.3686280712026	1264.722703209205	2	633.3692626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_KVKFM(Oxidation (M))KTIPGT_	ENSG00000143889|ENST00000449105|HNRNPLL;nc|ENSG00000143889|Q8WVV9-4|HNRNPLL;nc|ENSG00000143889|Q8WVV9-5|HNRNPLL	16.71738777980365	0.7922119881075679	2				NaN	NaN	0	NaN	12170	6826	18997
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	19005	54.415	NaN	3525.3	30	0	498.7	0.143				-1	 	0	41	336.5341033168387	1006.5804805507162	3	336.5342102050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	12171	6832	19004
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	19051	54.655	NaN	1945.3	30	0	190.93	0.146			+	-1	IMYSKLRFDDF	11	63	725.8542990325898	1449.6940451319795	2	725.8524780273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_IM(Oxidation (M))YSKLRFDDF_	REV__tr|U7SNG3|U7SNG3_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01981PE=4SV=1	36.446750945000026	0.6065623449959539	2				NaN	NaN	0	NaN	12172	6877	19050
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	19061	54.703	NaN	1417.8	30	0	158.95	0.142	+			33670	RNLNPKTA	8	61	457.264386794707	912.514220656214	2	457.26470947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RNLNPKTA_	ENST00000423021.2_1_9:5112501-5112846:+|nuORF	25.450171626174864	0.7628259754767981	2				NaN	NaN	0	NaN	12173	6886	19060
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	19065	54.72	NaN	2407.3	30	0	227.78	0.143				-1	 	0	59	494.30092966051006	986.5873063878201	2	494.3013000488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	12174	6889	19064
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	19069	54.736	NaN	2450.9	30	0	146.23	0.145			+	-1	SKIKANIFVVM	11	72	633.3686280712026	1264.722703209205	2	633.369873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_SKIKANIFVVM(Oxidation (M))_	REV__ENSG00000135540|ENST00000343505|NHSL1;REV__ENST00000426841.6_1_6:138768126-138820433:-|nuORF;REV__ENST00000479393.2_1_6:138791728-138820433:-|nuORF;REV__NHSL1|p.E1312Gfs*27|1|0.12|ENSG00000135540|chr6:138430422-138430423|-/C|frameshift_variant;REV__NHSL1|p.I1199Ffs*26|1|0.44|ENSG00000135540|chr6:138430763-138430763|G/-|frameshift_variant;REV__NHSL1|p.P932Rfs*70|1|0.13|ENSG00000135540|chr6:138431562-138431562|G/-|frameshift_variant	16.71738777980365	0.7922119881075679	2				NaN	NaN	0	NaN	12175	6892	19068
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	19073	54.752	NaN	2713.5	30	0	634.09	0.143				-1	 	0	39	336.5341033168387	1006.5804805507162	3	336.53424072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	12176	6895	19072
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	19080	54.784	NaN	1923	30	0	407.92	0.143	+			21018	KKIGLLTTM	9	57	502.81390490830336	NaN	0	502.8134765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KKIGLLTTM_	ENSG00000165915|ENST00000362021|SLC39A13;nc|ENSG00000165915|Q96H72-2|SLC39A13;SLC39A13|p.Q301Vfs*38|1|0.53|ENSG00000165915|chr11:47414891-47414892|CA/-|frameshift_variant	20.94693142431847	0.3660861156085067	2				NaN	NaN	0	NaN	12177	6901	19079
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	19126	55.024	NaN	1618.6	30	0	324.67	0.145			+	25014	LLGLKRGVYM	10	54	575.3455704255314	1148.6765879178627	2	575.3460083007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LLGLKRGVYM_	REV__ENSG00000167645|ENST00000339413|YIF1B;REV__ENST00000585563.5_1_19:38798235-38806107:-|nuORF;REV__ENST00000589644.1_1_19:38799650-38799980:-|nuORF;REV__nc|ENSG00000167645|Q5BJH7-2|YIF1B;REV__nc|ENSG00000167645|Q5BJH7-3|YIF1B;REV__nc|ENSG00000167645|Q5BJH7-4|YIF1B;REV__nc|ENSG00000167645|Q5BJH7-5|YIF1B;REV__nc|ENSG00000167645|Q5BJH7-6|YIF1B;REV__YIF1B|p.R149Afs*49|1|0.4|ENSG00000167645|chr19:38309015-38309015|G/-|frameshift_variant	24.20275056022122	0.6821818413321409	2				NaN	NaN	0	NaN	12178	6946	19125
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	19139	55.088	NaN	2878.1	30	0	611.18	0.143	+			33349	RHGPTITVK	9	46	336.8685769342162	NaN	0	336.86859130859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RHGPTITVK_	CON__P00978	22.579656572578934	0.3605601358598771	2				NaN	NaN	0	NaN	12179	6958	19138
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	19161	55.2	NaN	705.27	30	0	114.18	0.149			+	20857	KILSVLMN	8	36	459.2796540303617	NaN	0	459.2793884277344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KILSVLMN_	REV__ENST00000338051.4_1_5:134192491-134192722:+|nuORF	26.69291269510374	1.7418937515398478	2				NaN	NaN	0	NaN	12180	6979	19160
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	19204	55.427	NaN	3094.8	30	0	674.4	0.143				-1	 	0	47	336.5341033168387	1006.5804805507162	3	336.5343933105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	12181	7021	19203
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	19226	55.538	NaN	2701.3	30	0	276.07	0.143			+	21949	KSAKKQLAGT	10	56	516.3141527404317	1030.6137525476634	2	516.314697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSAKKQLAGT_	REV__ENSG00000170613|ENST00000302938|GARIN3;REV__FAM71B|p.L538*|2|0.27|ENSG00000170613|chr5:157162652-157162652|A/-|frameshift_variant	18.531049691330335	0.7222854500618138	2				NaN	NaN	0	NaN	12182	7042	19225
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	19233	55.57	NaN	1247.3	30	0	158.18	0.138				-1	 	0	47	325.6880508891755	649.361548845151	2	325.6882629394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	12183	7048	19232
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	19240	55.602	NaN	1700.9	30	0	286.33	0.144			+	49704	VYLLVRKTG	9	57	524.8273315429688	NaN	0	524.8273315429688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYLLVRKTG_	REV__ENSG00000083307|ENST00000646743|GRHL2;REV__nc|ENSG00000083307|Q6ISB3-2|GRHL2	24.20275056022122	0.35506675290109213	2				NaN	NaN	0	NaN	12184	7054	19239
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	19244	55.619	NaN	1031.3	30	0	92.986	0.142			+	21040	KKKQHSTT	8	53	479.2772579107208	956.5399628882416	2	479.2768859863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KKKQHSTT_	REV__ENSG00000067141|ENST00000261908|NEO1;REV__nc|ENSG00000067141|Q92859-2|NEO1;REV__nc|ENSG00000067141|Q92859-3|NEO1;REV__nc|ENSG00000067141|Q92859-4|NEO1	23.04248740728303	0.7814162927298575	2				NaN	NaN	0	NaN	12185	7057	19243
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	19275	55.78	NaN	2738.9	30	0	516.81	0.143				-1	 	0	38	336.5341033168387	1006.5804805507162	3	336.53399658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	12186	7087	19274
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	19324	56.13	NaN	2448	30	0	439.97	0.143				-1	 	0	37	336.5341033168387	1006.5804805507162	3	336.53436279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	12187	7135	19323
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	19361	56.325	NaN	1583.7	30	0	246.8	0.144	+			28501	NHGPRLRLL	9	59	538.3275721550561	1074.6405913769122	2	538.3267822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NHGPRLRLL_	ENSG00000169733|ENST00000310496|RFNG;ENST00000582478.5_1_17:80008786-80009642:-|nuORF	17.364965105453717	0.6112419832031293	2				NaN	NaN	0	NaN	12188	7171	19360
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	19386	56.455	NaN	2867.6	30	0	219.35	0.145	+			37529	SLLQPLNVEID	11	68	620.8426790618972	NaN	0	620.8432006835938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLLQPLNVEID_	CON__ENSEMBL:ENSBTAP00000038253;CON__P04264;CON__P12035;CON__Q01546;ENSG00000167768|ENST00000252244|KRT1;ENSG00000185069|ENST00000332411|KRT76;ENSG00000186442|ENST00000417996|KRT3	62.166158670854095	0.21204349702779623	2				NaN	NaN	0	NaN	12189	7195	19385
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	19390	56.472	NaN	2719.7	30	0	568.88	0.143				-1	 	0	37	336.5341033168387	1006.5804805507162	3	336.5343017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	12190	7198	19389
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	19397	56.505	NaN	783.29	30	0	102.55	0.138	+			29036	NSVDAAKPLL	10	34	343.19761571410726	NaN	0	343.1975402832031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NSVDAAKPLL_	ENSG00000129933|ENST00000262815|MAU2	33.921630207806714	0.38879399011744475	2				NaN	NaN	0	NaN	12191	7204	19396
200727_Lumos_FAIMS_CID_IT_CVSet1_5ul_172T	19455	56.814	NaN	2531.5	30	0	654.14	0.143				-1	 	0	32	336.5341033168387	1006.5804805507162	3	336.533935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	2				NaN	NaN	0	NaN	12192	7261	19454
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2130	11.115	NaN	1323.1	30	0	543.18	0.142	+			19212	KAAGAGKVTK	10	36	465.7907409667969	NaN	0	465.7907409667969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAAGAGKVTK_	ENSG00000156508|ENST00000309268|EEF1A1;ENST00000359165.5_1_12:19609181-19609565:-|nuORF;ENST00000436459.2_1_9:135895553-135896258:+|nuORF;ENST00000447052.1_1_21:24762753-24763314:+|nuORF;ENST00000547505.2_1_12:44054544-44054901:+|nuORF;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	61.691277971877994	0.22046696034287383	3				NaN	NaN	0	NaN	10	2118	2129
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2172	11.317	NaN	8146.4	30	0	1928	0.143			+	20605	KGAVSRRR	8	61	465.2909356618668	928.5673183905336	2	465.2926940917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KGAVSRRR_	REV__ENST00000261776.9_1_16:70834832-70834985:-|nuORF	53.351449002276354	0.5676011784961348	3				NaN	NaN	0	NaN	13	2157	2171
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2261	11.671	NaN	63398	30	0	17834	0.143				-1	 	0	82	501.82281848134585	1001.6310840294917	2	501.8245849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	39	2220	2260
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2407	12.23	NaN	8760.3	30	0	3117.6	0.146	+			5708	AVFFKVCDAK	10	44	395.54203538476446	1183.6042767544934	3	395.5435791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_AVFFKVC(Carbamidomethyl (C))DAK_	ZNF518A|p.L1107Ffs*8|1|0.31|ENSG00000177853|chr10:96159635-96159636|-/T|frameshift_variant	40.05817265558897	0.5486090488315611	3				NaN	NaN	0	NaN	86	2319	2406
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2492	12.546	NaN	5304.9	30	0	1756.5	0.143				-1	 	0	37	335.54036251996814	1003.5992581601045	3	335.5416564941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	114	2376	2491
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2497	12.563	NaN	1140.2	30	0	242.78	0.142				-1	 	0	40	485.80409816237403	969.5936433915481	2	485.80584716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	116	2379	2496
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2539	12.725	NaN	3283.4	30	0	789.4	0.147			+	3535	ASSSAFRCKFK	11	42	411.2137938650245	1230.6195521952736	3	411.21539306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASSSAFRCKFK_	REV__ENST00000503745.1_1_4:99300305-99313214:+|nuORF	24.231819034082204	0.7356191775841856	3				NaN	NaN	0	NaN	128	2409	2538
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2585	12.87	NaN	3062.7	30	0	364.85	0.142			+	20297	KEPLMIGGK	9	61	486.7812135600802	971.5478741869604	2	486.782958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEPLMIGGK_	REV__ENSG00000115541|ENST00000233893|HSPE1;REV__ENST00000463841.1_1_2:198365719-198367897:+|nuORF;REV__ENST00000473395.1_1_2:198365100-198366019:+|nuORF	96.19043198914106	0.047412499214244314	3				NaN	NaN	0	NaN	150	2433	2584
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2614	12.959	NaN	7554.2	30	0	3629.2	0.142				-1	 	0	46	478.7654693420962	955.5163857509924	2	478.7666931152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	164	2448	2613
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2628	12.99	NaN	2440.7	30	0	501.22	0.141	+			5003	ATSAPGNAR	9	33	422.7174979157772	NaN	0	422.7170715332031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSAPGNAR_	DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;nc|ENSG00000187908|Q9UGM3-2|DMBT1;nc|ENSG00000187908|Q9UGM3-2|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-4|DMBT1;nc|ENSG00000187908|Q9UGM3-4|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-8|DMBT1;nc|ENSG00000187908|Q9UGM3-8|DMBT1;nc|ENSG00000187908|Q9UGM3-9|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1	64.20726635412375	0.13137488984569443	3				NaN	NaN	0	NaN	175	2451	2627
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2641	13.018	NaN	4086.5	30	0	871.04	0.143				-1	 	0	59	514.8121797530315	1027.609806572863	2	514.8154907226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	185	2454	2640
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2685	13.163	NaN	701.4	30	0	180.54	0.143	+			12859	GEPVVPILCS	10	25	507.2698974609375	NaN	0	507.2698974609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEPVVPILCS_	ENSG00000197273|ENST00000357001|GUCA2A	20.94693142431847	0.4201028297492154	3				NaN	NaN	0	NaN	205	2478	2684
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2698	13.201	NaN	309.52	30	0	39.467	0.143	+			2571	AQDKSVVNK	9	28	494.77459716796875	NaN	0	494.77459716796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AQDKSVVNK_	ENSG00000003147|ENST00000402384|ICA1;ICA1|p.E307Lfs*26|1|0.05|ENSG00000003147|chr7:8141801-8141802|-/TTTTTCAA|frameshift_variant;ICA1|p.N204Tfs*5|2|0.36|ENSG00000003147|chr7:8158621-8158621|T/-|frameshift_variant;nc|ENSG00000003147|Q05084-2|ICA1;nc|ENSG00000003147|Q05084-3|ICA1	28.081489160057373	0.33578952234132536	3				NaN	NaN	0	NaN	212	2484	2697
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2755	13.389	NaN	1871.2	30	0	632.11	0.142			+	39638	STIEIRDK	8	41	481.267732248358	960.520911563516	2	481.2693786621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STIEIRDK_	REV__ENSG00000120253|ENST00000340413|NUP43;REV__nc|ENSG00000120253|Q8NFH3-2|NUP43	51.33545320467046	0.5859736979383976	3				NaN	NaN	0	NaN	239	2514	2754
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2763	13.421	NaN	1649.3	30	0	363.99	0.142			+	24808	LIMSAIYGG	9	31	462.74677891698093	923.4790049007619	2	462.748779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LIMSAIYGG_	REV__ENSG00000175497|ENST00000410059|DPP10;REV__nc|ENSG00000175497|Q8N608-2|DPP10;REV__nc|ENSG00000175497|Q8N608-3|DPP10;REV__nc|ENSG00000175497|Q8N608-4|DPP10	40.5726180659479	0.4135428067754104	3				NaN	NaN	0	NaN	241	2520	2762
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2781	13.475	NaN	2188.2	30	0	665.46	0.141				-1	 	0	39	431.2178835291189	860.4212141250379	2	431.21905517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	250	2529	2780
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2788	13.493	NaN	3091.6	30	0	1981.7	0.147	+			41466	SVNQGQNIHRK	11	31	427.56425298113686	1279.6709295436106	3	427.56549072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVNQGQNIHRK_	CFTR|p.E1044Dfs*20|1|0.04|ENSG00000001626|chr7:117610661-117610662|-/TCAAAGAAAAC|frameshift_variant;CFTR|p.G1208Afs*3|1|0.3|ENSG00000001626|chr7:117627672-117627672|G/-|frameshift_variant;CFTR|p.L1258Ffs*7|1|0.26|ENSG00000001626|chr7:117642487-117642488|-/T|frameshift_variant;CFTR|p.S1297Lfs*31|1|0.28|ENSG00000001626|chr7:117652852-117652852|T/-|frameshift_variant;ENSG00000001626|ENST00000003084|CFTR;nc|ENSG00000001626|P13569-2|CFTR	22.561587123415745	0.7531385481947795	3				NaN	NaN	0	NaN	254	2532	2787
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2823	13.601	NaN	1738.4	30	0	706.15	0.141			+	32652	RAAGGRRV	8	35	421.7571096780554	841.4996664229108	2	421.7581787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RAAGGRRV_	REV__ENST00000322434.7_1_5:178287063-178293254:+|nuORF	60.29395666154354	0.49887135096048313	3				NaN	NaN	0	NaN	271	2550	2822
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2851	13.691	NaN	4550.5	30	0	1468.3	0.214	+			899	AEHWCSLLK	9	55	543.7736251833442	1085.5326974334882	2	543.7763061523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEHWCSLLK_	ENSG00000198788|ENST00000675028|MUC2;nc|ENSG00000198788|Q02817|MUC2	60.11826168202944	0.21262886028301267	3				NaN	NaN	0	NaN	284	2565	2850
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2852	13.695	NaN	2457.9	30	0	260.67	0.034	+			16358	HEMTKTASA	9	53	488.2319824859976	NaN	0	488.2318420410156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HEMTKTASA_	ENSG00000060762|ENST00000360961|MPC1	120.8684288430529	0.001996491448359331	3				NaN	NaN	0	NaN	285	2565	2850
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2861	13.727	NaN	5215.4	30	0	952.42	0.214				-1	 	0	67	509.30453972814365	1016.5945265230873	2	509.3066711425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	288	2571	2860
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2862	13.731	NaN	1061.5	30	0	205.08	0.034				-1	 	0	39	463.7602534897975	925.505954046395	2	463.762451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	289	2571	2860
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2896	13.828	NaN	4198.1	30	0	3552.5	0.147			+	-1	RSCCTCLVRP	10	21	417.86495817654554	1250.5730451298366	3	417.8662414550781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_RSC(Carbamidomethyl (C))CTC(Carbamidomethyl (C))LVRP_	REV__ENST00000582583.4_1_17:20885020-20885254:+|nuORF	15.333111300571575	0.7385351678742351	3				NaN	NaN	0	NaN	308	2586	2895
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2944	13.948	NaN	9911	30	0	1859.4	0.214			+	28190	NARSSLAGPH	10	57	505.2626270126034	1008.5107010920068	2	505.2641296386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NARSSLAGPH_	REV__ENST00000355040.8_1_11:64001470-64001653:+|nuORF	35.61828744233558	0.588957954432594	3				NaN	NaN	0	NaN	341	2601	2943
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2945	13.951	NaN	8561.9	30	0	1560	0.036			+	-1	MILVLSLKQ	9	59	354.2191049208739	1059.6354853628218	3	354.2204895019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_M(Oxidation (M))ILVLSLKQ_	REV__tr|U7SSH6|U7SSH6_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01271PE=4SV=1	42.86426827375447	0.38666266728046506	3				NaN	NaN	0	NaN	342	2601	2943
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2964	14.005	NaN	2677.8	30	0	278.2	0.214	+			34517	RVGEVGQSK	9	61	480.26558480889753	958.5166166845951	2	480.2679443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVGEVGQSK_	ENSG00000041880|ENST00000398755|PARP3;ENST00000470601.5_1_3:51977371-51978822:+|nuORF;nc|ENSG00000041880|Q9Y6F1-2|PARP3	86.88156770896713	0.07365720931774442	3				NaN	NaN	0	NaN	352	2610	2963
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2965	14.009	NaN	1398.7	30	0	214.64	0.036			+	31641	QMRRMVKK	8	43	538.8128188293241	1075.611084725448	2	538.815185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QMRRMVKK_	REV__ENSG00000106633|ENST00000403799|GCK;REV__nc|ENSG00000106633|P35557-2|GCK;REV__nc|ENSG00000106633|P35557-3|GCK	53.351449002276354	0.5676011784961348	3				NaN	NaN	0	NaN	353	2610	2963
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2970	14.023	NaN	4517	30	0	1348.6	0.214			+	14767	GTKSSRTARL	10	48	359.5440310006319	1075.6102636020958	3	359.5452880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTKSSRTARL_	REV__ENST00000593922.5_1_19:50167869-50168958:-|nuORF;REV__ENST00000596765.5_1_19:50166451-50168958:-|nuORF;REV__ENST00000597198.5_1_19:50168886-50168958:-|nuORF;REV__ENST00000601291.5_1_19:50166730-50168958:-|nuORF	50.033510581677724	0.4566913063131936	3				NaN	NaN	0	NaN	355	2613	2969
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2971	14.027	NaN	1085.1	30	0	252.56	0.106			+	33507	RKMQGKVQ	8	27	487.7852972147461	NaN	0	487.78515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RKMQGKVQ_	REV__ENST00000503420.5_2_6:31125808-31125901:-|nuORF	25.450171626174864	1.7418937515398478	3				NaN	NaN	0	NaN	356	2613	2969
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2972	14.029	NaN	974.34	30	0	134.12	0.038			+	31910	QQKREAERL	9	32	386.5495419865631	1156.6267965598893	3	386.5510559082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QQKREAERL_	REV__ENSG00000165115|ENST00000297814|KIF27;REV__ENST00000422653.1_1_9:88385240-88401019:+|nuORF;REV__KIF27|p.K1223Tfs*2|1|0.11|ENSG00000165115|chr9:83842289-83842290|TT/-|frameshift_variant;REV__nc|ENSG00000165115|Q86VH2-2|KIF27;REV__nc|ENSG00000165115|Q86VH2-3|KIF27	39.252832667884924	0.4290233611298554	3				NaN	NaN	0	NaN	357	2613	2969
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2977	14.043	NaN	1984.9	30	0	239.36	0.142				-1	 	0	47	466.244218049576	930.473883165952	2	466.2463684082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	359	2616	2976
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2997	14.101	NaN	10765	30	0	3080.6	0.141			+	39789	STLAFRCP	8	60	447.72843279264544	893.4423126520909	2	447.72991943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STLAFRCP_	REV__ENSG00000240771|ENST00000286494|ARHGEF25;REV__nc|ENSG00000240771|Q86VW2-2|ARHGEF25;REV__nc|ENSG00000240771|Q86VW2-3|ARHGEF25	50.0245360154114	0.5941082100236891	3				NaN	NaN	0	NaN	370	2625	2996
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3034	14.204	NaN	1357.5	30	0	313.94	0.143				-1	VVMRDPASK	9	35	509.7715217936884	NaN	0	509.772216796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_VVM(Oxidation (M))RDPASK_	ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1	36.446750945000026	0.29355505452396785	3				NaN	NaN	0	NaN	392	2640	3033
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3053	14.25	NaN	1963.6	30	0	583.54	0.143	+			21937	KSADPLKSK	9	44	487.2873206808604	NaN	0	487.28759765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSADPLKSK_	CAPN7|p.K253Nfs*21|1|0.35|ENSG00000131375|chr3:15227870-15227870|A/-|frameshift_variant;ENSG00000131375|ENST00000253693|CAPN7;ENST00000457023.1_1_3:15247773-15262489:+|nuORF	76.16968421966216	0.08450868013726211	3				NaN	NaN	0	NaN	405	2646	3052
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3071	14.289	NaN	897.32	30	0	280.06	0.143			+	19728	KDTRLLKQ	8	34	501.3088684082031	NaN	0	501.3088684082031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KDTRLLKQ_	REV__ENSG00000139793|ENST00000679496|MBNL2;REV__nc|ENSG00000139793|Q5VZF2-2|MBNL2;REV__nc|ENSG00000139793|Q5VZF2-3|MBNL2;REV__nc|ENSG00000139793|Q5VZF2|MBNL2	40.77816245573522	1.7418937515398478	3				NaN	NaN	0	NaN	420	2649	3070
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3088	14.325	NaN	3232.5	30	0	492.25	0.214	+			34374	RTRGSRTAI	9	57	509.2985921068434	1016.5826312804868	2	509.30047607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTRGSRTAI_	ENST00000531579.5_1_11:62568856-62572845:-|nuORF	44.377184641726394	0.36891676396732553	3				NaN	NaN	0	NaN	434	2652	3087
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3089	14.329	NaN	1424.7	30	0	248.24	0.035	+			23130	KVVVSPTKK	9	40	493.3219263395921	984.6292997459842	2	493.3228454589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVVVSPTKK_	ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232323706-232327997:-|nuORF	66.96192283764107	0.15557981141143568	3				NaN	NaN	0	NaN	435	2652	3087
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3099	14.351	NaN	2243.7	30	0	1118.9	0.215				-1	 	0	44	403.20497136971477	804.3953898062296	2	403.2066650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	442	2655	3098
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3100	14.354	NaN	2223.3	30	0	713.09	0.106				-1	TAEYSMLPR	9	27	361.8442687988281	NaN	0	361.8442687988281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_TAEYSM(Oxidation (M))LPR_	tr|U7SLQ0|U7SLQ0_FUSNUMultifunctionalfusionproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=rphPE=3SV=1	27.882242232435846	0.3367954786602879	3				NaN	NaN	0	NaN	443	2655	3098
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3101	14.356	NaN	328.29	30	0	116.16	0.106	+			1739	AHQLEDRI	8	12	491.2591857910156	NaN	0	491.2591857910156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AHQLEDRI_	ENSG00000038382|ENST00000344204|TRIO;ENST00000515144.5_1_5:14293150-14488426:+|nuORF;nc|ENSG00000038382|O75962-2|TRIO;nc|ENSG00000038382|O75962-4|TRIO;nc|ENSG00000038382|O75962-5|TRIO;TRIO|p.E1028Rfs*29|1|0.41|ENSG00000038382|chr5:14369389-14369389|G/-|frameshift_variant;TRIO|p.K1219Nfs*43|2|0.16|ENSG00000038382|chr5:14387518-14387518|A/-|frameshift_variant;TRIO|p.V2351Cfs*62|3|0.3|ENSG00000038382|chr5:14487672-14487672|C/-|frameshift_variant	13.775330524044264	1.7418937515398478	3				NaN	NaN	0	NaN	444	2655	3098
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3102	14.358	NaN	2545.5	30	0	685.25	0.035				-1	MGIFYAIVA	9	30	334.17846110258074	999.5135539079422	3	334.1794128417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_M(Oxidation (M))GIFYAIVA_	tr|U7T0T7|U7T0T7_FUSNUPutativeK(+)-stimulatedpyrophosphate-energizedsodiumpumpOS=FusobacteriumnucleatumCTI-5OX=1316586GN=hppAPE=3SV=1	21.9598887501803	0.5980208138527809	3				NaN	NaN	0	NaN	445	2655	3098
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3134	14.462	NaN	1085.7	30	0	307.48	0.143				-1	 	0	29	500.2994831738752	499.2922067072752	1	500.3012390136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	459	2673	3133
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3143	14.484	NaN	2055.2	30	0	378.38	0.215	+			2822	ASAAGVQR	8	34	380.207773743044	758.400994552888	2	380.2090148925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASAAGVQR_	nc|ENSG00000105993|O75190-3|DNAJB6	82.30502934623384	0.30436709589983096	3				NaN	NaN	0	NaN	465	2676	3142
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3144	14.487	NaN	1153.5	30	0	428.11	0.04			+	51045	YLDKYAMFMK	10	37	437.21368408203125	NaN	0	437.21368408203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YLDKYAMFMK_	REV__ENSG00000147647|ENST00000351513|DPYS	20.030474535948922	0.4201028297492154	3				NaN	NaN	0	NaN	466	2676	3142
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3161	14.529	NaN	6082.7	30	0	1578.1	0.142				-1	 	0	54	452.7751918537416	903.5358307742832	2	452.77685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	477	2682	3160
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3171	14.552	NaN	2636	30	0	456.83	0.143	+			45382	TVTKPVGGDK	10	49	501.28366485078885	1000.5527767683777	2	501.7866516113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVTKPVGGDK_	ENSG00000089009|ENST00000202773|RPL6;ENST00000445338.1_1_10:13633913-13634195:-|nuORF;ENST00000454924.1_1_7:63602236-63602701:-|nuORF;RPL6|p.K237Rfs*4|1|0.04|ENSG00000089009|chr12:112405856-112405857|TT/-|frameshift_variant	47.227680397652996	0.4825456260682108	3				NaN	NaN	0	NaN	484	2685	3170
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3186	14.585	NaN	2447.4	30	0	464.84	0.142	+			22760	KVERSTDQ	8	45	481.7471695346658	961.4797861361316	2	481.74920654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVERSTDQ_	ENSG00000169902|ENST00000304842|TPST1	42.396135135203025	0.6414440140393314	3				NaN	NaN	0	NaN	496	2688	3185
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3242	14.727	NaN	1210.8	30	0	184.65	0.143	+			32018	QRLVVPATQ	9	47	506.2992654380604	1010.5839779429208	2	506.3012390136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QRLVVPATQ_	PCBP1|p.L100Q|7|0.33|ENSG00000169564|chr2:70088042-70088042|T/A|missense_variant	40.05817265558897	0.419577045485086	3				NaN	NaN	0	NaN	534	2706	3241
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3250	14.761	NaN	3419.7	30	0	332.22	0.145			+	16093	HDEQLELPSC	10	55	585.7584763752791	1169.502399817358	2	585.7605590820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HDEQLELPSC_	REV__PEF1|p.P42Lfs*95|1|0.12|ENSG00000162517|chr1:31635422-31635422|G/-|frameshift_variant	74.25504064058377	0.24255678544297835	3				NaN	NaN	0	NaN	536	2712	3249
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3256	14.777	NaN	3113.5	30	0	450.2	0.143	+			30728	QDKTGSFQI	9	60	512.258673918957	1022.502794904714	2	512.26171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QDKTGSFQI_	ZNF354A|p.K139T|1|0.32|ENSG00000169131|chr5:178713462-178713462|T/G|missense_variant	58.78195531508484	0.22376836668196862	3				NaN	NaN	0	NaN	539	2715	3255
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3261	14.793	NaN	1553.6	30	0	197.49	0.141	+			40976	SVGKGAVHD	9	44	435.22696244889136	NaN	0	435.2270202636719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVGKGAVHD_	ENSG00000161634|ENST00000293371|DCD	44.377184641726394	0.24544280798894275	3				NaN	NaN	0	NaN	541	2718	3260
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3275	14.824	NaN	1918.5	30	0	788.24	0.141				-1	 	0	31	429.73628931177075	857.4580256903415	2	429.737060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	552	2721	3274
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3288	14.854	NaN	3960.3	30	0	1305	0.214	+			20725	KGSSNSYAIKK	11	57	394.8860310299053	1181.636263689916	3	394.8872985839844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KGSSNSYAIKK_	ENSG00000083845|ENST00000196551|RPS5	64.22387071457851	0.2857512628307259	3				NaN	NaN	0	NaN	562	2724	3287
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3289	14.857	NaN	1620.3	30	0	264.1	0.037	+			31882	QQAALDPALKQ	11	45	591.8260974284589	1181.6376419237176	2	591.8267211914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QQAALDPALKQ_	CUX1|p.E933Sfs*59|1|0.14|ENSG00000257923|chr7:102202089-102202089|C/-|frameshift_variant;CUX1|p.I1081Sfs*39|2|0.46|ENSG00000257923|chr7:102227471-102227471|C/-|frameshift_variant;ENSG00000257923|ENST00000292535|CUX1;nc|ENSG00000257923|P39880-2|CUX1;nc|ENSG00000257923|P39880-3|CUX1;nc|ENSG00000257923|P39880-4|CUX1;nc|ENSG00000257923|P39880-5|CUX1;nc|ENSG00000257923|P39880-6|CUX1	72.28901530423826	0.21665691776497367	3				NaN	NaN	0	NaN	563	2724	3287
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3299	14.881	NaN	6639.6	30	0	1557.8	0.142				-1	 	0	56	439.23359729274756	876.4526416522951	2	439.2351379394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	570	2727	3298
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3316	14.925	NaN	27003	30	0	4824	0.143				-1	 	0	80	492.7696576020589	983.5247622709178	2	492.7714538574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	581	2733	3315
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3343	14.995	NaN	8306.9	30	0	2119.1	0.142				-1	GPRCASQE	8	60	452.7022946137415	903.390036294283	2	452.7041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GPRC(Carbamidomethyl (C))ASQE_	ENST00000561607.5_1_15:31196185-31196858:+|nuORF	64.20726635412375	0.4601301477144759	3				NaN	NaN	0	NaN	599	2742	3342
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3350	15.013	NaN	3321.7	30	0	1837.7	0.214				-1	TNIPHVQMVAI	11	30	413.5577650605323	NaN	0	413.5575256347656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_TNIPHVQM(Oxidation (M))VAI_	ENSG00000182670|ENST00000418766|TTC3;ENST00000472398.5_1_21:38529111-38558109:+|nuORF;nc|ENSG00000182670|P53804-2|TTC3;nc|ENSG00000182670|P53804-3|TTC3;TTC3|p.E1565Rfs*14|1|0.21|ENSG00000182670|chr21:37182840-37182841|-/A|frameshift_variant	23.37791116691581	0.456735970842152	3				NaN	NaN	0	NaN	603	2745	3349
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3351	15.017	NaN	559.86	30	0	96.403	0.035	+			35989	SEHPSTSKM	9	28	502.22915865957054	NaN	0	502.2288513183594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEHPSTSKM_	ENSG00000102241|ENST00000218364|HTATSF1;HTATSF1|p.K555Nfs*38|1|0.74|ENSG00000102241|chrX:136511406-136511406|A/-|frameshift_variant;HTATSF1|p.V610Cfs*2|1|0.32|ENSG00000102241|chrX:136511568-136511568|A/-|frameshift_variant	37.81151784470057	0.28666463014928195	3				NaN	NaN	0	NaN	604	2745	3349
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3361	15.05	NaN	1920	30	0	331.38	0.144	+			21874	KRMIRMAK	8	50	517.3094322117278	1032.6043114902554	2	517.3115844726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KRMIRMAK_	ENSG00000095380|ENST00000210444|NANS;ENST00000480925.1_1_9:100819090-100823312:+|nuORF;ENST00000495319.1_1_9:100819090-100837887:+|nuORF	60.29395666154354	0.49887135096048313	3				NaN	NaN	0	NaN	608	2751	3360
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3391	15.133	NaN	6114.4	30	0	1305.2	0.214				-1	 	0	57	334.1965472452423	999.5678123359269	3	334.1977844238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	626	2763	3390
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3392	15.137	NaN	1979.3	30	0	338.68	0.033	+			15810	GVWGNLVL	8	42	429.24978538801	NaN	0	429.24993896484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GVWGNLVL_	ENSG00000080031|ENST00000376350|PTPRH;ENST00000588559.5_1_19:55705613-55720813:-|nuORF;nc|ENSG00000080031|Q9HD43-2|PTPRH;nc|ENSG00000080031|Q9HD43-3|PTPRH;PTPRH|p.N460Kfs*60|1|0.11|ENSG00000080031|chr19:55200276-55200277|-/T|frameshift_variant	54.76467175910256	1.7418937515398478	3				NaN	NaN	0	NaN	627	2763	3390
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3408	15.177	NaN	1660.3	30	0	281.83	0.151			+	7881	DRMNLLMPWWF	11	44	503.57653202568133	1507.707766677244	3	503.57916259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DRMNLLMPWWF_	REV__RANBP6|p.R915W|2|0.27|ENSG00000137040|chr9:6012865-6012865|G/A|missense_variant	14.086013023434994	0.8045329596154472	3				NaN	NaN	0	NaN	637	2769	3407
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3429	15.229	NaN	2079.8	30	0	575.64	0.214	+			44589	TTCSKVFKK	9	40	366.87103271484375	NaN	0	366.87103271484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_TTC(Carbamidomethyl (C))SKVFKK_	ENSG00000167625|ENST00000301215|ZNF526	51.19269402634007	0.19847346126499396	3				NaN	NaN	0	NaN	652	2775	3428
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3430	15.233	NaN	1552.9	30	0	196.85	0.106			+	35444	SASHAQGGAK	10	48	457.23136505690013	NaN	0	457.2313232421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SASHAQGGAK_	REV__ENST00000473451.1_1_3:49950446-49967283:-|nuORF	44.377184641726394	0.34115073642966565	3				NaN	NaN	0	NaN	653	2775	3428
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3431	15.235	NaN	605.62	30	0	184.82	0.106			+	12169	GALLGGLAK	9	24	400.2553405761719	NaN	0	400.2553405761719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GALLGGLAK_	REV__tr|U7T0T7|U7T0T7_FUSNUPutativeK(+)-stimulatedpyrophosphate-energizedsodiumpumpOS=FusobacteriumnucleatumCTI-5OX=1316586GN=hppAPE=3SV=1	42.47446043378293	0.25855550551448697	3				NaN	NaN	0	NaN	654	2775	3428
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3432	15.237	NaN	2860.5	30	0	1455.1	0.039	+			37785	SLYEARNRTL	10	33	408.22235107421875	NaN	0	408.22235107421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLYEARNRTL_	BCHE|p.T343Nfs*8|1|0.44|ENSG00000114200|chr3:165830006-165830007|-/T|frameshift_variant;BCHE|p.Y528Ifs*2|1|0.26|ENSG00000114200|chr3:165786247-165786247|A/-|frameshift_variant;ENSG00000114200|ENST00000264381|BCHE	31.634271133179894	0.39630454568332174	3				NaN	NaN	0	NaN	655	2775	3428
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3481	15.346	NaN	6421.7	30	0	1562.9	0.214				-1	 	0	48	422.7285515631533	843.4425501931066	2	422.7299499511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	695	2784	3480
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3482	15.349	NaN	1130.7	30	0	208.76	0.036	+			34441	RTVSDSIKK	9	40	345.20506991094277	NaN	0	345.2051086425781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RTVSDSIKK_	ENSG00000137076|ENST00000314888|TLN1;nc|ENSG00000137076|Q9Y490-2|TLN1	58.2462437865262	0.1567987007793744	3				NaN	NaN	0	NaN	696	2784	3480
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3493	15.373	NaN	3688.7	30	0	1881.1	0.141	+			404	AASSSSLEK	9	46	440.223712951944	878.432872970688	2	440.2271728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AASSSSLEK_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196834|ENST00000451531|POTEI;ENST00000417985.1_1_X:46147855-46148119:-|nuORF;ENST00000418987.2_1_9:103493819-103494230:+|nuORF;ENST00000423183.1_1_3:12112396-12112453:+|nuORF;ENST00000450451.1_1_1:238090483-238090852:+|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2	67.49366992349736	0.1516260258713357	3				NaN	NaN	0	NaN	704	2787	3492
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3511	15.42	NaN	1946.4	30	0	576.25	0.214	+			27314	MGWTLGSSK	9	35	483.73894501952554	965.4633371058511	2	483.7409362792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MGWTLGSSK_	ENST00000374700.6_1_2:201450700-201450862:+|nuORF	35.61828744233558	0.47037581924408073	3				NaN	NaN	0	NaN	716	2793	3510
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3512	15.423	NaN	411.41	30	0	117.98	0.046				-1	DCCCCCCCEE	10	24	585.6138916015625	NaN	0	585.6138916015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_DC(Carbamidomethyl (C))CCCCCCEE_	ENSG00000170075|ENST00000367282|GPR37L1	0	0.4201028297492154	3				NaN	NaN	0	NaN	717	2793	3510
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3525	15.45	NaN	1545.7	30	0	298.68	0.143				-1	 	0	38	465.27235189365575	928.5301508541115	2	465.2740783691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	727	2796	3524
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3539	15.482	NaN	1967.3	30	0	401.86	0.141				-1	 	0	48	452.26500820288527	902.5154634725706	2	452.2665710449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	738	2799	3538
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3557	15.521	NaN	62059	30	0	6979.4	0.214			+	50344	WVFWVADCACL	11	91	457.2076680199882	NaN	0	457.2076110839844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_WVFWVADCAC(Carbamidomethyl (C))L_	REV__TLR7|p.T788A|1|0.63|ENSG00000196664|chrX:12887870-12887870|A/G|missense_variant	51.52775601994872	0.30434581687306933	3				NaN	NaN	0	NaN	753	2802	3556
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3558	15.524	NaN	3423.8	30	0	1368.5	0.034			+	46784	VHGCLSVEQ	9	51	486.23274214102906	970.4509313488581	2	486.2345886230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VHGCLSVEQ_	REV__ENST00000246672.3_1_17:38252288-38252739:-|nuORF	71.87747018426188	0.13267044672804276	3				NaN	NaN	0	NaN	754	2802	3556
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3575	15.559	NaN	2587.7	30	0	1092.9	0.14	+			41002	SVGSASSVK	9	31	411.2201920683392	820.4258312034784	2	411.22137451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVGSASSVK_	ENSG00000144840|ENST00000273375|RABL3	69.6276240434122	0.14239879520340665	3				NaN	NaN	0	NaN	768	2805	3574
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3592	15.602	NaN	8115.9	30	0	1624.9	0.214			+	-1	IMLTIVVQ	8	60	466.77772752602846	931.5409021188569	2	466.7801818847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_IM(Oxidation (M))LTIVVQ_	REV__ENSG00000165416|ENST00000310528|SUGT1;REV__nc|ENSG00000165416|Q9Y2Z0|SUGT1	47.91560031466742	0.6071945918984287	3				NaN	NaN	0	NaN	779	2811	3591
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3593	15.605	NaN	4615.2	30	0	993.38	0.034			+	50268	WRGMVVVK	8	66	487.78326114710563	973.5519693610113	2	487.7850341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WRGMVVVK_	REV__ENST00000355832.9_2_10:50740763-50741003:-|nuORF	60.97194046774394	0.49215940876911696	3				NaN	NaN	0	NaN	780	2811	3591
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3602	15.628	NaN	1454.2	30	0	194.33	0.144	+			13519	GLQASRSDIK	10	46	537.8007863284911	NaN	0	537.801025390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GLQASRSDIK_	ENSG00000090054|ENST00000262554|SPTLC1;SPTLC1|p.E218Afs*44|1|0.36|ENSG00000090054|chr9:92059215-92059216|CT/-|frameshift_variant	49.536043120802724	0.30853568297719935	3				NaN	NaN	0	NaN	786	2814	3601
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3622	15.688	NaN	6007	30	0	1700.7	0.214	+			18701	ITEAMIKY	8	58	492.75723352861496	983.4999141240299	2	492.7593688964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ITEAM(Oxidation (M))IKY_	tr|U7T406|U7T406_FUSNUCellshape-determiningproteinMreBOS=FusobacteriumnucleatumCTI-5OX=1316586GN=mreBPE=3SV=1	40.5726180659479	0.6527593143185008	3				NaN	NaN	0	NaN	797	2823	3621
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3623	15.691	NaN	16299	30	0	3105.8	0.034				-1	 	0	78	484.772303775665	967.5300546181301	2	484.7743835449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	798	2823	3621
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3632	15.711	NaN	14223	30	0	5594.9	0.214				-1	SVMTILYCR	9	55	381.52788860006046	1141.5618364003815	3	381.5292663574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SVMTILYC(Carbamidomethyl (C))R_	CHRM5|p.S354Kfs*2|1|0.3|ENSG00000184984|chr15:34063771-34063772|-/A|frameshift_variant;ENSG00000184984|ENST00000383263|CHRM5	31.529811441608018	0.5085848003137583	3				NaN	NaN	0	NaN	804	2826	3631
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3633	15.715	NaN	1561.7	30	0	729.41	0.036				-1	VKNIVNMLI	9	26	353.8814491345208	NaN	0	353.88140869140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_VKNIVNM(Oxidation (M))LI_	DAAM2|p.P525Lfs*11|1|0.48|ENSG00000146122|chr6:39879202-39879202|C/-|frameshift_variant;ENSG00000146122|ENST00000274867|DAAM2;nc|ENSG00000146122|Q86T65-4|DAAM2	14.137123925751023	0.3891339986947948	3				NaN	NaN	0	NaN	805	2826	3631
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3650	15.749	NaN	33465	30	0	5601.9	0.214				-1	 	0	81	486.79350386199405	971.5724547907881	2	486.7951354980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	819	2829	3649
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3651	15.753	NaN	1078.7	30	0	228.58	0.106			+	33542	RLDSLRNS	8	43	480.76519775390625	NaN	0	480.76519775390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RLDSLRNS_	REV__ENST00000376874.8_1_12:123956868-123957054:-|nuORF	21.9598887501803	1.7418937515398478	3				NaN	NaN	0	NaN	820	2829	3649
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3652	15.755	NaN	6596.3	30	0	1708.1	0.033	+			27862	MTGSSYHV	8	53	441.1948100764001	880.3750672196002	2	441.1965637207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MTGSSYHV_	ENSG00000110723|ENST00000265843|EXPH5;nc|ENSG00000110723|Q8NEV8-2|EXPH5	105.26878712358291	0.24777199087279123	3				NaN	NaN	0	NaN	821	2829	3649
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3666	15.784	NaN	864.84	30	0	187.11	0.215	+			26248	LSSRTSPR	8	33	452.25262451171875	NaN	0	452.25262451171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSSRTSPR_	ENST00000359520.11_1_14:102968187-102968367:+|nuORF	34.172542307311794	1.7418937515398478	3				NaN	NaN	0	NaN	832	2832	3665
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3667	15.787	NaN	1045.4	30	0	215.55	0.035	+			17189	HTSKIGVFPG	10	41	521.7899780273438	NaN	0	521.7899780273438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HTSKIGVFPG_	ENSG00000154447|ENST00000284637|SH3RF1	26.69291269510374	0.4125295221340092	3				NaN	NaN	0	NaN	833	2832	3665
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3716	15.907	NaN	1146.8	30	0	232.56	0.155				-1	 	0	41	662.6408747727206	1984.9007949183617	3	662.6430053710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	867	2847	3715
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3723	15.926	NaN	1382.7	30	0	208.8	0.214	+			4093	ATDPKAIGH	9	42	455.24343849227967	NaN	0	455.24334716796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATDPKAIGH_	ENSG00000117410|ENST00000472174|ATP6V0B;ENST00000496131.1_1_1:44442124-44442513:+|nuORF;nc|ENSG00000117410|Q99437-2|ATP6V0B	84.9155231211612	0.05454024040755679	3				NaN	NaN	0	NaN	871	2850	3722
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3724	15.929	NaN	1002.8	30	0	99.115	0.048				-1	 	0	43	633.6314697265625	NaN	0	633.6314697265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	872	2850	3722
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3734	15.952	NaN	1402.9	30	0	282.38	0.214	+			39048	SSSPPTSAPK	10	51	479.746258536983	957.4779641407661	2	479.74884033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSSPPTSAPK_	AluJo_dup65935|chr17:47951181-47951484:-|3.1232314964255035|0.4639684686261284|2.75|483.0|20|2|anti-sense	42.86426827375447	0.522752283233888	3				NaN	NaN	0	NaN	879	2853	3733
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3735	15.955	NaN	1895.8	30	0	390.87	0.034	+			29200	NVNEPATTK	9	52	487.25086609187935	NaN	0	487.25079345703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NVNEPATTK_	ENSG00000116906|ENST00000366647|GNPAT;nc|ENSG00000116906|O15228-2|GNPAT	101.45984612302182	0.018494728971010316	3				NaN	NaN	0	NaN	880	2853	3733
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3755	16.006	NaN	49898	30	0	18893	0.214				-1	 	0	59	418.22802831633487	834.4415036994698	2	418.2298278808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	894	2859	3754
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3756	16.01	NaN	1744.6	30	0	622.83	0.106			+	7295	DASDPILW	8	36	458.7257830981483	915.4370132630967	2	458.72845458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DASDPILW_	REV__ENSG00000167968|ENST00000320700|DNASE1L2;REV__ENSG00000213918|ENST00000246949|DNASE1;REV__ENST00000571460.5_1_16:3704910-3712757:+|nuORF;REV__nc|ENSG00000167968|Q92874-2|DNASE1L2;REV__nc|ENSG00000213918|P24855-2|DNASE1	42.47446043378293	0.6409579893742323	3				NaN	NaN	0	NaN	895	2859	3754
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3757	16.012	NaN	861.37	30	0	159.86	0.106			+	13930	GRREGRSQ	8	38	473.25202070919215	944.4894884851843	2	473.2535705566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GRREGRSQ_	REV__ENSG00000100106|ENST00000644935|TRIOBP;REV__nc|ENSG00000100106|Q9H2D6-2|TRIOBP;REV__nc|ENSG00000100106|Q9H2D6-3|TRIOBP;REV__nc|ENSG00000100106|Q9H2D6-5|TRIOBP;REV__nc|ENSG00000100106|Q9H2D6-6|TRIOBP;REV__nc|ENSG00000100106|Q9H2D6-7|TRIOBP	51.33545320467046	0.5859736979383976	3				NaN	NaN	0	NaN	896	2859	3754
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3758	16.014	NaN	1634.8	30	0	273.71	0.106	+			41780	SVSPVKATQK	10	47	522.8040650902079	1043.5935772472158	2	522.8072509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVSPVKATQK_	ENSG00000139354|ENST00000547754|GAS2L3	83.6470233535746	0.16744595502813267	3				NaN	NaN	0	NaN	897	2859	3754
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3759	16.015	NaN	940.56	30	0	319.68	0.034	+			22343	KTGHVIAVK	9	38	476.80080935720434	NaN	0	476.8002014160156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KTGHVIAVK_	ENSG00000076984|ENST00000397979|MAP2K7;ENST00000468058.1_1_19:7975099-7977313:+|nuORF;ENST00000494348.1_1_19:7974966-7975513:+|nuORF;MAP2K7|p.P292Qfs*119|2|0.25|ENSG00000076984|chr19:7911264-7911264|C/-|frameshift_variant;nc|ENSG00000076984|O14733-2|MAP2K7;nc|ENSG00000076984|O14733-3|MAP2K7;nc|ENSG00000076984|O14733-4|MAP2K7	65.46538089061403	0.1260090208616529	3				NaN	NaN	0	NaN	898	2859	3754
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3771	16.041	NaN	2515.7	30	0	266.06	0.214				-1	 	0	56	465.2724117905385	928.530270647877	2	465.2742919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	907	2862	3770
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3772	16.044	NaN	5558.1	30	0	746.03	0.106			+	7083	CVPNEGIGKV	10	66	508.26561235192037	1014.5166717706408	2	508.267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_CVPNEGIGKV_	REV__ENST00000455605.2_1_6:43488011-43488227:+|nuORF	54.776311868738084	0.41334902933431344	3				NaN	NaN	0	NaN	908	2862	3770
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3773	16.046	NaN	5629.6	30	0	1159.2	0.106			+	46973	VKKSRGGRR	9	58	522.3296183418247	1042.6446837504493	2	522.3321533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VKKSRGGRR_	REV__ENST00000324238.6_1_17:29131068-29151569:-|nuORF	63.30626980617807	0.18605348971131092	3				NaN	NaN	0	NaN	909	2862	3770
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3774	16.048	NaN	608.19	30	0	119.87	0.106			+	5751	AVGKEEKG	8	33	409.2245146926605	NaN	0	409.22454833984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVGKEEKG_	REV__ENST00000376851.7_1_19:51471875-51472205:-|nuORF	29.14955571784316	1.7418937515398478	3				NaN	NaN	0	NaN	910	2862	3770
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3775	16.05	NaN	623.1	30	0	200.42	0.037				-1	ASKANKKPMQ	10	22	373.537841796875	NaN	0	373.537841796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_ASKANKKPM(Oxidation (M))Q_	CDK19|p.R112C|1|0.32|ENSG00000155111|chr6:110667556-110667556|G/A|missense_variant;ENSG00000155111|ENST00000368911|CDK19;nc|ENSG00000155111|Q9BWU1-2|CDK19	16.71738777980365	0.4201028297492154	3				NaN	NaN	0	NaN	911	2862	3770
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3808	16.128	NaN	1031.1	30	0	179.22	0.214			+	37443	SLIDTNDHGLL	11	26	399.8761864237369	NaN	0	399.876220703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLIDTNDHGLL_	REV__ENST00000373473.5_1_20:36374873-36393614:+|nuORF	25.125986553469783	0.45344013546260314	3				NaN	NaN	0	NaN	935	2871	3807
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3809	16.131	NaN	776.08	30	0	278.39	0.034	+			3425	ASQKVTISK	9	36	481.28765869140625	NaN	0	481.28765869140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASQKVTISK_	CACUL1|p.Y368Tfs*100|1|0.52|ENSG00000151893|chr10:118686137-118686137|C/-|frameshift_variant;ENST00000369151.7_1_10:120445350-120445566:-|nuORF	63.42647028704847	0.13470499157941143	3				NaN	NaN	0	NaN	936	2871	3807
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3820	16.155	NaN	6426.8	30	0	1554.5	0.214				-1	 	0	54	429.27502469664023	856.5354964600805	2	429.27655029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	944	2874	3819
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3821	16.158	NaN	4912.8	30	0	1821.7	0.106			+	31086	QFKENLSQ	8	58	497.25371042026075	992.4928679073215	2	497.2557373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QFKENLSQ_	REV__ENSG00000166130|ENST00000299157|IKBIP	129.42129120953632	0.22108578470213103	3				NaN	NaN	0	NaN	945	2874	3819
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3822	16.16	NaN	1584.2	30	0	264.25	0.035	+			33244	RGAPVSVYQ	9	46	488.7629025297265	975.511252126253	2	489.26513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RGAPVSVYQ_	ENSG00000173482|ENST00000580170|PTPRM;ENSG00000196090|ENST00000373187|PTPRT;nc|ENSG00000173482|P28827|PTPRM;nc|ENSG00000196090|O14522-1|PTPRT;PTPRT|p.P1075Rfs*6|6|0.15|ENSG00000196090|chr20:42110363-42110363|G/-|frameshift_variant;PTPRT|p.S1349Pfs*31|1|0.6|ENSG00000196090|chr20:42084774-42084774|G/-|frameshift_variant	30.317721548370564	0.5199124245378496	3				NaN	NaN	0	NaN	946	2874	3819
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3835	16.187	NaN	3836.1	30	0	1035.4	0.214	+			42668	TAVVNGEFK	9	57	482.7585610308514	963.5025691285028	2	482.7592468261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAVVNGEFK_	ENSG00000165672|ENST00000298510|PRDX3;nc|ENSG00000165672|P30048-2|PRDX3	42.396135135203025	0.392153681582562	3				NaN	NaN	0	NaN	956	2877	3834
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3836	16.191	NaN	906.71	30	0	121.26	0.032			+	19314	KAGTTPSE	8	29	395.7012634277344	NaN	0	395.7012634277344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KAGTTPSE_	REV__ENSG00000133243|ENST00000255608|BTBD2;REV__ENST00000589685.2_1_19:1986489-1990887:-|nuORF;REV__nc|ENSG00000133243|Q9BX70-2|BTBD2	30.503639358989545	1.7418937515398478	3				NaN	NaN	0	NaN	957	2877	3834
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3848	16.216	NaN	6028.2	30	0	1985.8	0.143			+	12374	GDSKFVVVN	9	36	322.17473372322195	963.5023717698659	3	322.17596435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GDSKFVVVN_	REV__ENSG00000198788|ENST00000675028|MUC2;REV__nc|ENSG00000198788|Q02817|MUC2	24.20275056022122	0.577060078256802	3				NaN	NaN	0	NaN	966	2880	3847
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3856	16.238	NaN	2534	30	0	192.84	0.214	+			44387	TSLIPMTYK	9	60	527.2861317841187	1052.5577106350372	2	527.288818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSLIPMTYK_	ENSG00000157423|ENST00000393567|HYDIN;HYDIN|p.E2653Kfs*4|1|0.27|ENSG00000157423|chr16:70918259-70918259|T/-|frameshift_variant;HYDIN|p.F4256Vfs*111|1|0.27|ENSG00000157423|chr16:70849833-70849834|-/C|frameshift_variant;HYDIN|p.I1986Nfs*6|1|0.45|ENSG00000157423|chr16:70961970-70961971|-/T|frameshift_variant;HYDIN|p.R1703Lfs*51|1|0.5|ENSG00000157423|chr16:70973950-70973951|-/GA|frameshift_variant;HYDIN|p.V3416Gfs*64|1|0.15|ENSG00000157423|chr16:70879725-70879726|-/ACTCC|frameshift_variant;nc|ENSG00000157423|Q4G0P3-10|HYDIN;nc|ENSG00000157423|Q4G0P3-5|HYDIN;nc|ENSG00000157423|Q4G0P3-6|HYDIN;nc|ENSG00000157423|Q4G0P3-8|HYDIN	49.44154591367651	0.3095138337212152	3				NaN	NaN	0	NaN	971	2883	3855
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3857	16.242	NaN	320.37	30	0	41.143	0.032			+	26450	LTGSVMGK	8	25	396.718505859375	NaN	0	396.718505859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LTGSVMGK_	REV__PCSK9|p.T260M|1|0.41|ENSG00000169174|chr1:55052771-55052771|C/T|missense_variant	18.324413293986947	1.7418937515398478	3				NaN	NaN	0	NaN	972	2883	3855
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3878	16.291	NaN	8859.7	30	0	1748.7	0.214	+			37024	SIQRKLQEK	9	61	377.2265055390529	1128.6576872173587	3	377.2278747558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIQRKLQEK_	ENSG00000138640|ENST00000264344|FAM13A;ENST00000508360.5_1_4:89653076-89671014:-|nuORF;ENST00000511573.5_1_4:89649686-89680064:-|nuORF;nc|ENSG00000138640|O94988-1|FAM13A;nc|ENSG00000138640|O94988-3|FAM13A;nc|ENSG00000138640|O94988-5|FAM13A;nc|ENSG00000138640|O94988-6|FAM13A	98.58198989935565	0.04066992115528678	3				NaN	NaN	0	NaN	987	2889	3877
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3879	16.294	NaN	1870.5	30	0	1000.3	0.106	+			16781	HPAENGKSNF	10	43	550.7573331685633	1099.5001134039264	2	550.7604370117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HPAENGKSNF_	B2M|p.V69Sfs*21|1|0.67|ENSG00000166710|chr15:44715554-44715555|-/A|frameshift_variant;B2M|p.V69Wfs*34|1|0.32|ENSG00000166710|chr15:44715555-44715555|A/-|frameshift_variant;B2M|p.Y98Lfs*5|1|0.08|ENSG00000166710|chr15:44715648-44715648|A/-|frameshift_variant;ENSG00000166710|ENST00000648006|B2M;ENST00000559720.5_1_15:45003705-45007919:+|nuORF	58.22992032128504	0.38193887838457763	3				NaN	NaN	0	NaN	988	2889	3877
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3880	16.296	NaN	1631.3	30	0	757	0.106	+			32485	QVNGGTVAEK	10	39	501.7626713800086	1001.5107898268172	2	501.7650451660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QVNGGTVAEK_	ENSG00000100316|ENST00000216146|RPL3;ENST00000413027.1_1_6:31248141-31248948:+|nuORF	41.42661286455405	0.5359995577334734	3				NaN	NaN	0	NaN	989	2889	3877
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3881	16.298	NaN	1321.4	30	0	249.47	0.106	+			37042	SIRMGDIRRGV	11	36	420.5697326660156	NaN	0	420.5697326660156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SIRMGDIRRGV_	ENSG00000157796|ENST00000399820|WDR19;ENST00000512095.5_1_4:39217537-39276579:+|nuORF;WDR19|p.N1166Mfs*5|1|0.21|ENSG00000157796|chr4:39272989-39272989|A/-|frameshift_variant	26.063383197487333	0.44926255568796863	3				NaN	NaN	0	NaN	990	2889	3877
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3882	16.3	NaN	1216.3	30	0	385.2	0.036			+	-1	QCYIKNKK	8	42	541.2962393014213	NaN	0	541.2964477539062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_QC(Carbamidomethyl (C))YIKNKK_	REV__ENSG00000136504|ENST00000259021|KAT7;REV__ENST00000444292.2_1_X:95228575-95229244:-|nuORF;REV__ENST00000512616.5_1_17:47892935-47904861:+|nuORF;REV__ENST00000513980.5_1_17:47892935-47904861:+|nuORF;REV__KAT7|p.V504Lfs*14|1|0.35|ENSG00000136504|chr17:49826024-49826024|A/-|frameshift_variant;REV__nc|ENSG00000136504|O95251-2|KAT7;REV__nc|ENSG00000136504|O95251-3|KAT7;REV__nc|ENSG00000136504|O95251-4|KAT7;REV__nc|ENSG00000136504|O95251-5|KAT7	44.53106598305862	1.7418937515398478	3				NaN	NaN	0	NaN	991	2889	3877
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3893	16.325	NaN	3400.6	30	0	429.03	0.214				-1	 	0	59	487.2731680543898	972.5317831755797	2	487.27459716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	999	2892	3892
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3894	16.328	NaN	1419.2	30	0	368.85	0.035	+			46442	VESGLPSGDE	10	38	495.2238427538294	988.4331325744588	2	495.2259521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VESGLPSGDE_	ACAN|p.P2306Lfs*10|1|0.42|ENSG00000157766|chr15:88860405-88860405|C/-|frameshift_variant;ENSG00000157766|ENST00000560601|ACAN;nc|ENSG00000157766|P16112-2|ACAN;nc|ENSG00000157766|P16112-3|ACAN;nc|ENSG00000157766|P16112|ACAN	27.882242232435846	0.6521336255503853	3				NaN	NaN	0	NaN	1000	2892	3892
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3901	16.345	NaN	939.95	30	0	252.8	0.145	+			37701	SLSPAALAPFL	11	23	362.8768005371094	NaN	0	362.8768005371094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLSPAALAPFL_	ENST00000451493.5_1_13:36920782-36920917:-|nuORF	16.473147378115264	0.456735970842152	3				NaN	NaN	0	NaN	1004	2895	3900
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3910	16.367	NaN	1453	30	0	285.45	0.142	+			23043	KVTDPSVAK	9	34	472.77257839288154	943.5306038525631	2	472.7739562988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVTDPSVAK_	ENSG00000198408|ENST00000361464|OGA;nc|ENSG00000198408|O60502-2|OGA;nc|ENSG00000198408|O60502-4|OGA	33.921630207806714	0.48623198279849766	3				NaN	NaN	0	NaN	1010	2898	3909
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3922	16.394	NaN	2322.9	30	0	1008.2	0.214	+			23007	KVSKELVEK	9	39	353.8839656443502	1058.6300675332507	3	353.8851013183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVSKELVEK_	ENSG00000125844|ENST00000377813|RRBP1;nc|ENSG00000125844|Q9P2E9-3|RRBP1;RRBP1|p.A628Gfs*69|1|0.35|ENSG00000125844|chr20:17621915-17621916|-/T|frameshift_variant	60.1669710687717	0.2122228167747824	3				NaN	NaN	0	NaN	1019	2901	3921
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3923	16.398	NaN	1119.3	30	0	139.85	0.106				-1	 	0	46	454.76185335646414	907.5091537797283	2	454.7632751464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1020	2901	3921
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3924	16.4	NaN	2193.9	30	0	192.8	0.034			+	31123	QGAMRLLQ	8	56	458.75658261130985	915.4986122894197	2	458.75921630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QGAMRLLQ_	REV__nc|ENSG00000100300|B1AH88|TSPO	57.81127852772723	0.5234495074909924	3				NaN	NaN	0	NaN	1021	2901	3921
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3937	16.426	NaN	92214	30	0	26730	0.214	+			38868	SSNSYAIKK	9	98	333.18192094144064	NaN	0	333.1819763183594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSNSYAIKK_	ENSG00000083845|ENST00000196551|RPS5;ENST00000599232.1_1_19:58906030-58906114:+|nuORF	88.17693792209575	0.04527150213038833	3				NaN	NaN	0	NaN	1031	2904	3936
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3938	16.43	NaN	6068.1	30	0	2828	0.106			+	33680	RNSCKLMK	8	46	327.17714007088773	978.5095908128633	3	327.1783142089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RNSCKLMK_	REV__CENPJ|p.L906*|1|0.48|ENSG00000151849|chr13:24904034-24904034|A/-|frameshift_variant;REV__ENSG00000151849|ENST00000381884|CENPJ;REV__nc|ENSG00000151849|Q9HC77-2|CENPJ	26.69291269510374	0.7532304684939817	3				NaN	NaN	0	NaN	1032	2904	3936
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3939	16.432	NaN	1310.9	30	0	399.76	0.106			+	44507	TSSSPRTM	8	31	433.70543560297693	NaN	0	433.7052307128906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TSSSPRTM_	REV__ENST00000521993.2_1_8:37602115-37602163:+|nuORF	53.351449002276354	1.7418937515398478	3				NaN	NaN	0	NaN	1033	2904	3936
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3940	16.434	NaN	388.78	30	0	86.967	0.035	+			38869	SSNSYAIKK	9	26	499.2690734863281	NaN	0	499.2690734863281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSNSYAIKK_	ENSG00000083845|ENST00000196551|RPS5;ENST00000599232.1_1_19:58906030-58906114:+|nuORF	45.02220120713402	0.24099765136254067	3				NaN	NaN	0	NaN	1034	2904	3936
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3957	16.469	NaN	3348.4	30	0	466.75	0.214	+			41857	SVTEPSQGR	9	56	480.73914811629805	959.4637432993961	2	480.7403564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVTEPSQGR_	ENSG00000019102|ENST00000326621|VSIG2;nc|ENSG00000019102|Q96IQ7-2|VSIG2	51.19269402634007	0.2889735674168909	3				NaN	NaN	0	NaN	1048	2907	3956
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3958	16.472	NaN	1537.2	30	0	315.16	0.039			+	-1	VVICLLCLLVM	11	35	412.23756463570703	NaN	0	412.2377624511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_VVICLLCLLVM(Oxidation (M))_	REV__ENSG00000121940|ENST00000369969|CLCC1;REV__ENST00000482889.1_1_1:109472820-109486481:-|nuORF;REV__nc|ENSG00000121940|Q96S66-2|CLCC1	27.047317107675042	0.44487757903053116	3				NaN	NaN	0	NaN	1049	2907	3956
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3976	16.508	NaN	902.76	30	0	128.28	0.141	+			51287	YSAARSAAA	9	36	434.2198904898198	NaN	0	434.2198486328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YSAARSAAA_	ENSG00000189143|ENST00000340958|CLDN4	36.446750945000026	0.29355505452396785	3				NaN	NaN	0	NaN	1064	2910	3975
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3994	16.547	NaN	2162.6	30	0	518.02	0.214				-1	 	0	53	478.7780360666188	955.5415192000377	2	478.779541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1079	2913	3993
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3995	16.55	NaN	1391.3	30	0	468.54	0.033				-1	 	0	32	451.23335169738834	900.4521504615767	2	451.2348327636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1080	2913	3993
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4013	16.587	NaN	3666.2	30	0	1406.4	0.142				-1	 	0	52	462.75915003707587	923.5037471409518	2	462.76123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1095	2916	4012
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4020	16.605	NaN	5904.7	30	0	3122	0.14				-1	 	0	33	406.1994286049699	810.3843042767398	2	406.2010498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1099	2919	4019
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4035	16.646	NaN	1883.3	30	0	238.43	0.143	+			20074	KEKGKISSL	9	56	495.30170893331484	988.5888649334297	2	495.3029479980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEKGKISSL_	ENSG00000131558|ENST00000253861|EXOC4;ENST00000462055.5_1_7:132937857-133164897:+|nuORF;ENST00000486013.5_1_7:132937857-133314895:+|nuORF;EXOC4|p.N439Ifs*15|1|0.39|ENSG00000131558|chr7:133475456-133475456|A/-|frameshift_variant;EXOC4|p.N439Kfs*28|1|0.17|ENSG00000131558|chr7:133475455-133475456|-/A|frameshift_variant;nc|ENSG00000131558|Q96A65-2|EXOC4	67.49366992349736	0.1516260258713357	3				NaN	NaN	0	NaN	1108	2925	4034
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4056	16.697	NaN	9122.4	30	0	1104.7	0.214				-1	 	0	73	495.77071982767484	989.5268867221497	2	495.7722473144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1123	2931	4055
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4057	16.701	NaN	1668	30	0	287.67	0.033				-1	 	0	40	442.78045199807536	883.5463510629507	2	442.7819519042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1124	2931	4055
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4095	16.797	NaN	18408	30	0	2130	0.214	+			51214	YPSRDEYEAHQ	11	69	465.5375459614205	1393.5908084844616	3	465.5395202636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YPSRDEYEAHQ_	ENSG00000121481|ENST00000367510|RNF2;ENST00000442955.2_1_9:6669517-6669934:-|nuORF;RNF2|p.S310Lfs*12|1|0.35|ENSG00000121481|chr1:185100214-185100214|T/-|frameshift_variant	32.03412808689991	0.6537793186749145	3				NaN	NaN	0	NaN	1150	2943	4094
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4096	16.801	NaN	994.55	30	0	142	0.106			+	23938	LDQGLRAAK	9	48	486.2850036621094	NaN	0	486.2850036621094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LDQGLRAAK_	REV__ENST00000565382.1_1_16:84150699-84150948:+|nuORF	45.97224482568171	0.23445038899310136	3				NaN	NaN	0	NaN	1151	2943	4094
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4097	16.803	NaN	4834.1	30	0	1766.9	0.034				-1	 	0	59	474.76977374331454	947.5249945534291	2	474.77142333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1152	2943	4094
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4117	16.85	NaN	2295.4	30	0	1438.3	0.144	+			32248	QTKREVLK	8	26	334.5403897229105	1000.5993397689315	3	334.54168701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QTKREVLK_	APC|p.P1453Lfs*20|2|0.29|ENSG00000134982|chr5:112839951-112839951|C/-|frameshift_variant	23.04248740728303	0.7814162927298575	3				NaN	NaN	0	NaN	1166	2949	4116
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4135	16.894	NaN	11166	30	0	2414.3	0.146			+	37228	SKNPCKCLIG	10	44	392.86720251778826	1175.5797781535648	3	392.8681945800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_SKNPC(Carbamidomethyl (C))KC(Carbamidomethyl (C))LIG_	REV__ENST00000334295.8_1_18:34376463-34376655:-|nuORF	41.42661286455405	0.5359995577334734	3				NaN	NaN	0	NaN	1178	2955	4134
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4145	16.92	NaN	3981.3	30	0	1480.5	0.141	+			6354	AVTSGVATK	9	42	417.2387441698118	832.4629354064236	2	417.2403564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVTSGVATK_	ENSG00000249992|ENST00000503771|TMEM158;nc|ENSG00000249992|Q8WZ71-2|TMEM158	30.317721548370564	0.5199124245378496	3				NaN	NaN	0	NaN	1185	2958	4144
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4186	17.023	NaN	9933.1	30	0	4431	0.144				-1	GACVKKCKK	9	50	341.19394098023895	1020.5599935409168	3	341.19512939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GAC(Carbamidomethyl (C))VKKCKK_	tr|U7SU07|U7SU07_FUSNUSulfitereductase,subunitCOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01055PE=3SV=1	26.69291269510374	0.5537881896960711	3				NaN	NaN	0	NaN	1214	2970	4185
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4199	17.052	NaN	2802	30	0	496.11	0.214	+			22772	KVFDAKPSAK	10	53	545.8145422014771	1089.6145314697542	2	545.8179321289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVFDAKPSAK_	ENSG00000143889|ENST00000449105|HNRNPLL;nc|ENSG00000143889|Q8WVV9-4|HNRNPLL;nc|ENSG00000143889|Q8WVV9-5|HNRNPLL	166.86328052991698	0.004682781289308735	3				NaN	NaN	0	NaN	1224	2973	4198
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4200	17.055	NaN	472.07	30	0	51.924	0.035				-1	LPSSLDTLP	9	25	492.7641906738281	NaN	0	492.7641906738281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LPSSLDTLP_	ENSG00000165685|ENST00000543484|TMEM52B;ENST00000546153.1_1_12:10339004-10342736:+|nuORF;nc|ENSG00000165685|Q4KMG9-2|TMEM52B;TMEM52B|p.Y138C|1|0.12|ENSG00000165685|chr12:10190001-10190001|A/G|missense_variant	18.324413293986947	0.3749620627292244	3				NaN	NaN	0	NaN	1225	2973	4198
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4209	17.075	NaN	31196	30	0	19894	0.214				-1	 	0	74	494.27524712614166	986.5359413190833	2	494.27691650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1231	2976	4208
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4210	17.079	NaN	3828.7	30	0	1272	0.033			+	30276	PTGCLIEM	8	50	432.2040872206271	862.3936215080543	2	432.2057189941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PTGCLIEM_	REV__ENST00000253008.2_1_9:133557731-133557833:+|nuORF	35.200714571348534	0.6875396545722289	3				NaN	NaN	0	NaN	1232	2976	4208
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4223	17.106	NaN	1469.8	30	0	412.16	0.214			+	2029	AKPMPGGR	8	35	407.2267401495173	NaN	0	407.2262878417969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AKPMPGGR_	REV__MIA|p.L30Afs*3|1|0.36|ENSG00000261857|chr19:40775626-40775627|-/A|frameshift_variant	38.80614096846853	1.7418937515398478	3				NaN	NaN	0	NaN	1242	2979	4222
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4224	17.11	NaN	1688.3	30	0	206.55	0.04				-1	RAMGMEDILRC	11	43	437.5405296033753	NaN	0	437.5403137207031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_RAM(Oxidation (M))GMEDILRC_	ENSG00000135931|ENST00000611582|ARMC9;nc|ENSG00000135931|Q7Z3E5-2|ARMC9	36.527901853580055	0.402626628657532	3				NaN	NaN	0	NaN	1243	2979	4222
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4237	17.137	NaN	5046.1	30	0	1363.1	0.214				-1	 	0	48	444.741597846721	887.468642760242	2	444.74285888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1253	2982	4236
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4238	17.14	NaN	1994.2	30	0	679.5	0.034	+			17130	HSRCLRPG	8	56	463.2437108997001	924.4728688662002	2	463.2467956542969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HSRCLRPG_	ENST00000474013.1_1_7:99971734-99973868:+|nuORF	40.5726180659479	0.6527593143185008	3				NaN	NaN	0	NaN	1254	2982	4236
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4251	17.167	NaN	1938.6	30	0	399.91	0.144	+			9496	EKTLKIAKM	9	53	531.32080078125	NaN	0	531.32080078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EKTLKIAKM_	ENST00000420068.1_1_21:34602513-34619036:+|nuORF	51.33545320467046	0.19748963086191895	3				NaN	NaN	0	NaN	1264	2985	4250
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4269	17.205	NaN	4942.5	30	0	1495.9	0.214				-1	 	0	54	437.73400698931766	873.4534610454353	2	437.7352294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1279	2988	4268
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4270	17.209	NaN	8552.5	30	0	2389.9	0.106				-1	TGRCIKMR	8	40	346.516190044049	1036.526740732347	3	346.5174865722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_TGRC(Carbamidomethyl (C))IKM(Oxidation (M))R_	C9|p.C142Afs*6|1|0.25|ENSG00000113600|chr5:39341199-39341199|G/-|frameshift_variant;C9|p.L339Ffs*10|1|0.22|ENSG00000113600|chr5:39311231-39311232|-/A|frameshift_variant;C9|p.M293Cfs*5|1|0.21|ENSG00000113600|chr5:39311371-39311371|T/-|frameshift_variant;C9|p.N277Mfs*21|1|0.37|ENSG00000113600|chr5:39315815-39315815|T/-|frameshift_variant;ENSG00000113600|ENST00000263408|C9	35.61828744233558	0.6843154725607303	3				NaN	NaN	0	NaN	1280	2988	4268
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4271	17.211	NaN	1570	30	0	454.22	0.034			+	17475	ICQLPQGTL	9	38	486.7655977876338	NaN	0	486.7650451660156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ICQLPQGTL_	REV__ENSG00000105325|ENST00000441788|FZR1;REV__ENST00000586212.1_1_19:3532513-3533660:+|nuORF;REV__nc|ENSG00000105325|Q9UM11-3|FZR1;REV__nc|ENSG00000105325|Q9UM11|FZR1	42.396135135203025	0.2590952873412954	3				NaN	NaN	0	NaN	1281	2988	4268
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4301	17.277	NaN	3880.8	30	0	275.13	0.143				-1	 	0	70	515.8147572543703	1029.6149615755405	2	516.3186645507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1305	2994	4300
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4314	17.306	NaN	6725.2	30	0	1149.5	0.144	+			22097	KSMNANTITK	10	68	554.2934964382436	1106.572439943287	2	554.2958374023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSMNANTITK_	ENSG00000175467|ENST00000312397|SART1	136.5150327860613	0.011683253857074924	3				NaN	NaN	0	NaN	1315	2997	4313
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4326	17.333	NaN	3834.9	30	0	555.86	0.214			+	27776	MRPKEPTQ	8	55	501.7541410848619	1001.4937292365238	2	501.7558898925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))RPKEPTQ_	REV__nc|ENSG00000188803|Q6ZSJ9|SHISA6	66.42927471994793	0.4381325844043345	3				NaN	NaN	0	NaN	1324	3000	4325
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4327	17.337	NaN	1579.9	30	0	256.12	0.106	+			16378	HENESVYKA	9	45	538.752874076793	1075.4911952203859	2	538.7557373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HENESVYKA_	ENSG00000182481|ENST00000330459|KPNA2;ENST00000578492.5_1_17:62746826-62750158:-|nuORF	91.26522074875469	0.06129826844580791	3				NaN	NaN	0	NaN	1325	3000	4325
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4328	17.338	NaN	6583.3	30	0	2127.9	0.035	+			4258	ATGESIAVKK	10	48	335.19747902929055	NaN	0	335.1972961425781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATGESIAVKK_	DCLRE1C|p.R685Efs*6|1|0.37|ENSG00000152457|chr10:14908434-14908434|T/-|frameshift_variant;ENSG00000152457|ENST00000378278|DCLRE1C;nc|ENSG00000152457|Q96SD1-2|DCLRE1C;nc|ENSG00000152457|Q96SD1-3|DCLRE1C	54.722347961057174	0.27574710963839943	3				NaN	NaN	0	NaN	1326	3000	4325
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4359	17.412	NaN	9989.3	30	0	2678.7	0.142				-1	 	0	63	466.28031886896576	930.5460848047315	2	466.2823181152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1348	3009	4358
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4370	17.439	NaN	7517	30	0	1853.6	0.214			+	4006	ATCFVWGK	8	57	484.737891107508	967.461229281816	2	484.73931884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_ATC(Carbamidomethyl (C))FVWGK_	REV__BNC1|p.R356W|1|0.36|ENSG00000169594|chr15:83264185-83264185|G/A|missense_variant	73.97473282117947	0.3737790450121076	3				NaN	NaN	0	NaN	1356	3012	4369
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4371	17.443	NaN	1284.4	30	0	394.96	0.038	+			40754	SVDIIQKKRK	10	37	405.59305804222316	NaN	0	405.5929870605469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVDIIQKKRK_	CAMSAP2|p.K1052Rfs*43|1|0.32|ENSG00000118200|chr1:200849887-200849887|A/-|frameshift_variant	16.006774744331256	0.4201028297492154	3				NaN	NaN	0	NaN	1357	3012	4369
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4395	17.497	NaN	54112	30	0	14109	0.214			+	32143	QSNKLTEEGAK	11	83	402.21077662345897	1203.6105004705769	3	402.2124938964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QSNKLTEEGAK_	REV__ACTR3B-JMJD1C|1|fusion;REV__ENSG00000171988|ENST00000399262|JMJD1C;REV__JMJD1C|p.A1206Efs*30|1|0.07|ENSG00000171988|chr10:63208052-63208053|-/GTAAAGTT|frameshift_variant;REV__JMJD1C|p.A2114Cfs*5|1|0.04|ENSG00000171988|chr10:63189399-63189400|-/T|frameshift_variant;REV__JMJD1C|p.I2113Kfs*18|1|0.04|ENSG00000171988|chr10:63189400-63189401|-/TT|frameshift_variant;REV__nc|ENSG00000171988|Q15652-2|JMJD1C;REV__nc|ENSG00000171988|Q15652-3|JMJD1C	44.377184641726394	0.49804979881800077	3				NaN	NaN	0	NaN	1375	3018	4394
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4396	17.5	NaN	2347.7	30	0	1341.1	0.038				-1	SVFQQGMKNK	10	22	394.86918632653635	NaN	0	394.8694763183594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_SVFQQGM(Oxidation (M))KNK_	ENSG00000018625|ENST00000361216|ATP1A2;ENSG00000105409|ENST00000648268|ATP1A3;ENSG00000163399|ENST00000295598|ATP1A1;ENST00000479960.1_1_1:116943772-116944278:+|nuORF;nc|ENSG00000105409|P13637-2|ATP1A3;nc|ENSG00000105409|P13637-3|ATP1A3;nc|ENSG00000163399|P05023-3|ATP1A1;nc|ENSG00000163399|P05023-4|ATP1A1	21.68575002086885	0.4201028297492154	3				NaN	NaN	0	NaN	1376	3018	4394
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4408	17.526	NaN	2385.2	30	0	448.97	0.214			+	20695	KGPPVVML	8	44	420.75462004725364	839.4946871613073	2	420.75555419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KGPPVVML_	REV__LTR16B2_dup1420|chr19:41726501-41726771:-|2.1926953284573405|0.1104633581990186|4.31|479.0|5|2|sense	29.841539824830324	0.7289191502596711	3				NaN	NaN	0	NaN	1385	3021	4407
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4409	17.529	NaN	4958.6	30	0	1711.3	0.036	+			48947	VVESGEDIVL	10	54	530.2818153916703	1058.5490778501405	2	530.2841186523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVESGEDIVL_	ENSG00000261371|ENST00000563924|PECAM1;nc|ENSG00000261371|P16284-2|PECAM1;nc|ENSG00000261371|P16284-3|PECAM1;nc|ENSG00000261371|P16284-4|PECAM1;nc|ENSG00000261371|P16284-5|PECAM1;nc|ENSG00000261371|P16284-6|PECAM1	53.351449002276354	0.42630798468005626	3				NaN	NaN	0	NaN	1386	3021	4407
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4423	17.559	NaN	5976.4	30	0	1673.3	0.214	+			1994	AKFLAKKEF	9	32	361.2206738779717	NaN	0	361.22064208984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AKFLAKKEF_	tr|U7SSM4|U7SSM4_FUSNUPeptidaseTOS=FusobacteriumnucleatumCTI-5OX=1316586GN=pepTPE=3SV=1	19.1035232394073	0.3723251548669699	3				NaN	NaN	0	NaN	1397	3024	4422
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4424	17.563	NaN	8452	30	0	2872.7	0.106	+			32701	RAHRPSRVQ	9	55	369.5473859370178	1105.6203284112535	3	369.5487365722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RAHRPSRVQ_	ENSG00000135898|ENST00000650999|GPR55	32.75053402867276	0.49717649897795874	3				NaN	NaN	0	NaN	1398	3024	4422
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4425	17.565	NaN	1293.7	30	0	397.86	0.106				-1	 	0	39	425.2358158874027	848.4570788416054	2	425.2372131347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1399	3024	4422
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4426	17.566	NaN	192.96	30	0	38.727	0.106	+			29657	PGLGGGKG	8	8	321.6820068359375	NaN	0	321.6820068359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PGLGGGKG_	ENST00000359827.7_1_7:132261243-132261777:-|nuORF	20.481830146152948	1.741893751539848	3				NaN	NaN	0	NaN	1400	3024	4422
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4427	17.568	NaN	588.94	30	0	91.551	0.106			+	-1	PFVRGFTM	8	31	485.744384765625	NaN	0	485.744384765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_PFVRGFTM(Oxidation (M))_	REV__ENSG00000198089|ENST00000400288|SFI1;REV__ENST00000382162.7_1_22:31904270-32000328:+|nuORF;REV__ENST00000486708.1_1_22:31924838-31946432:+|nuORF;REV__nc|ENSG00000198089|A8K8P3-2|SFI1	26.79610172149135	1.7418937515398478	3				NaN	NaN	0	NaN	1401	3024	4422
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4428	17.57	NaN	514.27	30	0	136.91	0.034			+	3536	ASSSALPTW	9	26	460.2311096191406	NaN	0	460.2311096191406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASSSALPTW_	REV__ENST00000262510.10_2_16:57051083-57054679:+|nuORF	29.14955571784316	0.3303970763161698	3				NaN	NaN	0	NaN	1402	3024	4422
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4441	17.597	NaN	4723.4	30	0	569.66	0.143			+	46038	VCAAYKKPD	9	59	497.7549984136107	993.4954438940214	2	497.7564697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VCAAYKKPD_	REV__sp|F5HEU0|US03_HCMVMMembraneglycoproteinUS3OS=Humancytomegalovirus(strainMerlin)OX=295027GN=US3PE=2SV=1;REV__sp|P09712|US03_HCMVAMembraneglycoproteinUS3OS=Humancytomegalovirus(strainAD169)OX=10360GN=US3PE=2SV=1	40.77816245573522	0.41113185337114944	3				NaN	NaN	0	NaN	1412	3027	4440
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4452	17.622	NaN	10243	30	0	4216.7	0.214				-1	 	0	54	437.76981357149566	873.5250742097913	2	437.771240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1420	3030	4451
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4453	17.626	NaN	2344	30	0	527.88	0.106	+			44376	TSLCLMME	8	41	472.19989492231156	942.3852369114231	2	472.2021179199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_TSLCLM(Oxidation (M))ME_	ENST00000466897.1_1_1:5946982-5948606:-|nuORF	42.47446043378293	0.6409579893742323	3				NaN	NaN	0	NaN	1421	3030	4451
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4454	17.628	NaN	1688.1	30	0	504.46	0.106			+	-1	GAGRAHRG	8	37	412.21729803947835	822.4200431457567	2	412.2188720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))GAGRAHRG_	REV__ENST00000369550.9_1_X:153991185-153991239:+|nuORF	28.2542754592877	0.7411748056684583	3				NaN	NaN	0	NaN	1422	3030	4451
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4455	17.629	NaN	695.09	30	0	127.32	0.037			+	11233	FIHCIRIKK	9	30	579.3520022350943	1156.6894515369886	2	579.3539428710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FIHCIRIKK_	REV__nc|ENSG00000136153|Q8WWI1-2|LMO7;REV__nc|ENSG00000136153|Q8WWI1-3|LMO7;REV__nc|ENSG00000136153|Q8WWI1-4|LMO7;REV__nc|ENSG00000136153|Q8WWI1|LMO7	37.15910966729921	0.4535818937225704	3				NaN	NaN	0	NaN	1423	3030	4451
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4467	17.655	NaN	14538	30	0	1261.2	0.214			+	-1	FPCRDQCWVPS	11	59	465.53742944040675	1393.5904589214203	3	465.53936767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_FPCRDQC(Carbamidomethyl (C))WVPS_	REV__ENST00000375771.5_2_1:16112488-16112728:+|nuORF	38.714083909724	0.5755383074156426	3				NaN	NaN	0	NaN	1432	3033	4466
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4468	17.658	NaN	4552.1	30	0	1077.6	0.035			+	32318	QTRRKNSI	8	62	501.79330525228926	1001.5720575713785	2	501.7951354980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QTRRKNSI_	REV__tr|U7SFM6|U7SFM6_FUSNUCRISPR-associatedendoribonucleaseCas2OS=FusobacteriumnucleatumCTI-5OX=1316586GN=cas2PE=3SV=1	76.7741389293348	0.3504530765139327	3				NaN	NaN	0	NaN	1433	3033	4466
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4482	17.688	NaN	3162.5	30	0	961.61	0.214	+			32323	QTSLHRRS	8	57	492.76953516296686	983.5245173927337	2	492.77093505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QTSLHRRS_	ENST00000296550.11_1_4:150999880-151000132:+|nuORF	51.33545320467046	0.5859736979383976	3				NaN	NaN	0	NaN	1444	3036	4481
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4483	17.691	NaN	21244	30	0	5104.6	0.106				-1	 	0	74	450.7647473460018	899.5149417588036	2	450.7664794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1445	3036	4481
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4484	17.693	NaN	1061.5	30	0	490.58	0.106			+	36714	SGSTVKEK	8	29	418.2277960697061	834.4410392062122	2	418.22894287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SGSTVKEK_	REV__ENSG00000171560|ENST00000403106|FGA;REV__nc|ENSG00000171560|P02671|FGA	31.529811441608018	0.715883593221515	3				NaN	NaN	0	NaN	1446	3036	4481
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4485	17.695	NaN	1028.5	30	0	460.98	0.036			+	49058	VVISSSTSSSQ	11	27	541.2715104753673	1080.5284680175346	2	541.273681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVISSSTSSSQ_	REV__ENSG00000198569|ENST00000673835|SLC34A3	19.1035232394073	0.7810393085260824	3				NaN	NaN	0	NaN	1447	3036	4481
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4499	17.724	NaN	962.39	30	0	221.59	0.214			+	37601	SLPPQAVKKS	10	25	352.21562292152396	NaN	0	352.21551513671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLPPQAVKKS_	REV__ENSG00000167962|ENST00000562103|ZNF598;REV__ENST00000565396.5_1_16:2048964-2050409:-|nuORF;REV__nc|ENSG00000167962|Q86UK7-2|ZNF598;REV__nc|ENSG00000167962|Q86UK7-3|ZNF598;REV__nc|ENSG00000167962|Q86UK7-4|ZNF598;REV__nc|ENSG00000167962|Q86UK7|ZNF598;REV__ZNF598|p.P646Afs*20|1|0.5|ENSG00000167962|chr16:1999075-1999076|-/G|frameshift_variant	27.882242232435846	0.4086243523356342	3				NaN	NaN	0	NaN	1458	3039	4498
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4500	17.728	NaN	507.84	30	0	94.417	0.106			+	8075	DVPQSRQY	8	25	496.7431335449219	NaN	0	496.7431335449219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DVPQSRQY_	REV__ARID5A-CNNM3|1|fusion;REV__ENSG00000168763|ENST00000305510|CNNM3;REV__ENST00000465224.5_1_2:97490916-97493694:+|nuORF;REV__nc|ENSG00000168763|Q8NE01-2|CNNM3;REV__nc|ENSG00000168763|Q8NE01-3|CNNM3	18.324413293986947	1.7418937515398478	3				NaN	NaN	0	NaN	1459	3039	4498
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4501	17.73	NaN	2198.4	30	0	1250.6	0.106	+			46726	VGPKFSIPSP	10	23	343.5292663574219	NaN	0	343.5292663574219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VGPKFSIPSP_	ENSG00000141052|ENST00000425538|MYOCD;nc|ENSG00000141052|Q8IZQ8-2|MYOCD;nc|ENSG00000141052|Q8IZQ8|MYOCD	17.468008924990375	0.4201028297492154	3				NaN	NaN	0	NaN	1460	3039	4498
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4502	17.732	NaN	2687.5	30	0	665.17	0.106	+			40287	STSRRSMP	8	40	461.2332425250841	920.4519321169682	2	461.2347412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STSRRSMP_	ENST00000593163.5_1_19:33991848-34002015:-|nuORF	47.91560031466742	0.6071945918984287	3				NaN	NaN	0	NaN	1461	3039	4498
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4503	17.734	NaN	1598.5	30	0	178.02	0.036	+			34197	RTDEAAFQK	9	51	533.2680181684904	1064.5214834037806	2	533.2698974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RTDEAAFQK_	ENSG00000196154|ENST00000368716|S100A4	91.26522074875469	0.06129826844580791	3				NaN	NaN	0	NaN	1462	3039	4498
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4517	17.762	NaN	1905.8	30	0	815.86	0.146			+	47805	VSISEKCIIW	10	30	393.2158203125	NaN	0	393.2158203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSISEKCIIW_	REV__ENSG00000133742|ENST00000523022|CA1	33.921630207806714	0.38879399011744475	3				NaN	NaN	0	NaN	1473	3042	4516
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4530	17.792	NaN	3135.1	30	0	341.81	0.142	+			34681	RVSSQLIQ	8	57	465.7700634829555	929.525574032711	2	465.7716979980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVSSQLIQ_	ENSG00000180787|ENST00000318833|ZFP3;ZFP3|p.R273I|1|0.35|ENSG00000180787|chr17:5092322-5092322|G/T|missense_variant	66.42927471994793	0.4381325844043345	3				NaN	NaN	0	NaN	1483	3045	4529
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4545	17.825	NaN	3018.2	30	0	1111.6	0.214	+			4277	ATGGMANVK	9	45	424.71860063539765	NaN	0	424.7185974121094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATGGMANVK_	ENSG00000136936|ENST00000375128|XPA;XPA|p.A65T|1|0.24|ENSG00000136936|chr9:97693739-97693739|C/T|missense_variant	96.19043198914106	0.029117245125711146	3				NaN	NaN	0	NaN	1495	3048	4544
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4546	17.828	NaN	4431.8	30	0	1392.1	0.106	+			4111	ATDYGTIKK	9	34	332.8502502441406	NaN	0	332.8502502441406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATDYGTIKK_	ENSG00000112902|ENST00000382496|SEMA5A	42.86426827375447	0.2558691296974908	3				NaN	NaN	0	NaN	1496	3048	4544
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4547	17.83	NaN	9049.6	30	0	3862.2	0.106				-1	 	0	63	466.7725975519039	931.5306421706078	2	466.7745666503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1497	3048	4544
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4548	17.832	NaN	3338.1	30	0	1369.4	0.106				-1	TTIGLAPLMAM	11	36	378.86943605709314	NaN	0	378.8694763183594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_TTIGLAPLM(Oxidation (M))AM_	ADAM19|p.P794Lfs*18|1|0.07|ENSG00000135074|chr5:157488434-157488434|G/-|frameshift_variant;ENSG00000135074|ENST00000257527|ADAM19;ENST00000517951.5_1_5:156822576-156936463:-|nuORF;nc|ENSG00000135074|Q9H013|ADAM19	25.125986553469783	0.45344013546260314	3				NaN	NaN	0	NaN	1498	3048	4544
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4549	17.834	NaN	1915.3	30	0	220.7	0.106			+	-1	MCRLQFWNWN	10	45	471.877685546875	NaN	0	471.877685546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_M(Oxidation (M))CRLQFWNWN_	REV__ARFGAP2|p.R93Afs*43|1|0.43|ENSG00000149182|chr11:47175302-47175302|A/-|frameshift_variant;REV__ENSG00000149182|ENST00000524782|ARFGAP2;REV__ENST00000395449.7_1_11:47187835-47198404:-|nuORF;REV__ENST00000524727.5_1_11:47194869-47198404:-|nuORF;REV__ENST00000526185.5_1_11:47197353-47198404:-|nuORF;REV__ENST00000527097.5_1_11:47193699-47198404:-|nuORF	33.921630207806714	0.38879399011744475	3				NaN	NaN	0	NaN	1499	3048	4544
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4550	17.836	NaN	3129.1	30	0	347.53	0.106			+	32002	QRIALVFPK	9	59	357.8956394989718	NaN	0	357.5610046386719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QRIALVFPK_	REV__LTR1_dup85|chr7:101629186-101629993:-|1.8197208364654407|0.0003248618387484|12.45|329.0|3|1|sense	62.107414245175825	0.1403307765918332	3				NaN	NaN	0	NaN	1500	3048	4544
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4551	17.837	NaN	378	30	0	69.874	0.035			+	32891	RDMPIVSY	8	27	490.7486572265625	NaN	0	490.7486572265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RDMPIVSY_	REV__ENSG00000147130|ENST00000314425|ZMYM3;REV__nc|ENSG00000147130|Q14202-2|ZMYM3	30.503639358989545	1.7418937515398478	3				NaN	NaN	0	NaN	1501	3048	4544
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4564	17.864	NaN	813.29	30	0	157.77	0.214	+			22488	KTNLTSVTK	9	39	496.2925720214844	NaN	0	496.2925720214844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTNLTSVTK_	ENSG00000197386|ENST00000355072|HTT;ENST00000510626.5_1_4:3131970-3189635:+|nuORF;HTT|p.H2238Ffs*6|1|0.28|ENSG00000197386|chr4:3212643-3212644|CA/-|frameshift_variant;HTT|p.P2413Hfs*44|1|0.6|ENSG00000197386|chr4:3217944-3217944|C/-|frameshift_variant;HTT|p.R1412H|1|0.18|ENSG00000197386|chr4:3174789-3174789|G/A|missense_variant	85.16082228582465	0.053699699744190164	3				NaN	NaN	0	NaN	1511	3051	4563
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4565	17.868	NaN	2337.2	30	0	820.53	0.106	+			20762	KHIPRFQQST	10	47	414.5619898683172	1240.6641402051516	3	414.5641174316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KHIPRFQQST_	ENST00000337304.2_1_22:39917262-39917451:+|nuORF	26.063383197487333	0.6669871633831898	3				NaN	NaN	0	NaN	1512	3051	4563
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4566	17.87	NaN	875.94	30	0	423.56	0.106				-1	AAAAKSTAM	9	23	419.21057246571917	NaN	0	419.2108459472656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_AAAAKSTAM(Oxidation (M))_	ENSG00000104067|ENST00000614355|TJP1;nc|ENSG00000104067|Q07157-2|TJP1;nc|ENSG00000104067|Q07157|TJP1	24.20275056022122	0.35506675290109213	3				NaN	NaN	0	NaN	1513	3051	4563
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4567	17.872	NaN	247	30	0	52.896	0.106	+			4136	ATEQEDAAVAK	11	19	566.7780151367188	NaN	0	566.7780151367188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATEQEDAAVAK_	ENSG00000125844|ENST00000377813|RRBP1;nc|ENSG00000125844|Q9P2E9-3|RRBP1;RRBP1|p.A628Gfs*69|1|0.35|ENSG00000125844|chr20:17621915-17621916|-/T|frameshift_variant	18.531049691330335	0.456735970842152	3				NaN	NaN	0	NaN	1514	3051	4563
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4568	17.873	NaN	194.66	30	0	68.052	0.036			+	26402	LTEIFRDR	8	10	350.52978515625	NaN	0	350.52978515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LTEIFRDR_	REV__tr|U7SGH4|U7SGH4_FUSNUToprimdomain-containingprotein(Fragment)OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02307PE=4SV=1	8.231297230196988	1.7418937515398478	3				NaN	NaN	0	NaN	1515	3051	4563
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4583	17.905	NaN	6554.7	30	0	4198.7	0.214	+			5856	AVIQGQAVRK	10	31	357.2194744488679	1068.6365939468037	3	357.2210388183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVIQGQAVRK_	ENSG00000099812|ENST00000215582|MISP	37.81151784470057	0.569310847604193	3				NaN	NaN	0	NaN	1527	3054	4582
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4584	17.909	NaN	2416.4	30	0	491.61	0.106				-1	 	0	40	534.8274848692547	1067.6404168053093	2	534.8303833007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1528	3054	4582
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4585	17.911	NaN	3687.1	30	0	2037.6	0.106			+	47704	VSFFFQVIPI	10	37	399.5618070969202	1195.6635918909606	3	399.56298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSFFFQVIPI_	REV__ENSG00000163900|ENST00000421852|TMEM41A;REV__ENST00000467061.1_1_3:185212393-185212549:-|nuORF;REV__ENST00000475480.5_1_3:185199046-185216749:-|nuORF;REV__TMEM41A|p.K241Nfs*9|1|0.21|ENSG00000163900|chr3:185491609-185491609|T/-|frameshift_variant;REV__TMEM41A|p.N197Kfs*31|1|0.08|ENSG00000163900|chr3:185491741-185491742|-/CAAGTACTGC|frameshift_variant	28.081489160057373	0.6505064946289502	3				NaN	NaN	0	NaN	1529	3054	4582
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4586	17.912	NaN	2316.1	30	0	678.07	0.106	+			3891	ATAQFKINKK	10	32	383.5647277832031	NaN	0	383.5647277832031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATAQFKINKK_	ENSG00000143228|ENST00000271452|NUF2;NUF2|p.I401Nfs*2|1|0.3|ENSG00000143228|chr1:163349015-163349016|-/A|frameshift_variant	24.231819034082204	0.4201028297492154	3				NaN	NaN	0	NaN	1530	3054	4582
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4587	17.914	NaN	1590.4	30	0	262.37	0.035			+	18186	ILYRHPPE	8	42	512.7866547747665	NaN	0	512.786376953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ILYRHPPE_	REV__ENSG00000157330|ENST00000614859|CFAP107	79.45101966838831	1.7418937515398478	3				NaN	NaN	0	NaN	1531	3054	4582
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4605	17.951	NaN	54381	30	0	9170.1	0.214				-1	 	0	76	425.23589922040406	848.4572455076081	2	425.2372741699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1546	3057	4604
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4606	17.955	NaN	13296	30	0	7157.3	0.106			+	30305	PTMLASMLPL	10	45	358.52906896662637	1072.5653775000792	3	358.5304870605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PTMLASMLPL_	REV__ENSG00000169188|ENST00000374987|APEX2	29.170058357718403	0.6416167986984785	3				NaN	NaN	0	NaN	1547	3057	4604
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4607	17.957	NaN	2497	30	0	627.63	0.106				-1	 	0	45	415.240858166814	828.467163400428	2	415.241943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1548	3057	4604
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4608	17.959	NaN	4451.6	30	0	286.07	0.035			+	11310	FKVEGKCVH	9	63	523.77486175722	1045.53517058124	2	523.7767944335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FKVEGKCVH_	REV__ENST00000591146.2_1_19:1203272-1203464:+|nuORF	54.776311868738084	0.25715957988447635	3				NaN	NaN	0	NaN	1549	3057	4604
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4622	17.988	NaN	11443	30	0	3372.5	0.14				-1	 	0	56	401.1890440662165	800.3635351992331	2	401.1905212402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1560	3060	4621
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4638	18.023	NaN	2699.2	30	0	752.3	0.214	+			42332	TAGGWAKGQ	9	46	438.22194709804677	874.4293412628936	2	438.2233581542969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAGGWAKGQ_	ENST00000407973.2_2_22:24951006-24951796:-|nuORF;nc|ENSG00000138867|Q96NT3-3|GUCD1	63.30626980617807	0.18605348971131092	3				NaN	NaN	0	NaN	1573	3063	4637
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4639	18.026	NaN	959.35	30	0	195.05	0.106	+			22166	KSSDVFSSK	9	30	492.753425501816	NaN	0	492.7533264160156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KSSDVFSSK_	ENSG00000169435|ENST00000307439|RASSF6;nc|ENSG00000169435|Q6ZTQ3-3|RASSF6;nc|ENSG00000169435|Q6ZTQ3-4|RASSF6;nc|ENSG00000169435|Q6ZTQ3|RASSF6;RASSF6|p.K253Nfs*25|1|0.16|ENSG00000169435|chr4:73582195-73582195|T/-|frameshift_variant	36.446750945000026	0.29355505452396785	3				NaN	NaN	0	NaN	1574	3063	4637
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4640	18.028	NaN	1214.7	30	0	143.86	0.106	+			49072	VVKKRTHWIYL	11	44	481.62541065755113	1441.8544025728534	3	481.62738037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVKKRTHWIYL_	TTC31|p.P213Hfs*46|1|0.33|ENSG00000115282|chr2:74491324-74491324|C/-|frameshift_variant	10.10389549528425	0.8231785578855622	3				NaN	NaN	0	NaN	1575	3063	4637
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4641	18.03	NaN	1620	30	0	254.71	0.036			+	34000	RSHGPVLRR	9	39	539.3219049235847	1076.6292569139694	2	539.3245239257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RSHGPVLRR_	REV__ENST00000523366.1_1_5:172353721-172353871:+|nuORF	19.996771675451527	0.6112419832031292	3				NaN	NaN	0	NaN	1576	3063	4637
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4656	18.061	NaN	10455	30	0	2209.5	0.214	+			29851	PLCLLLLLT	9	56	352.5557900256216	1054.645540677065	3	352.55694580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_PLC(Carbamidomethyl (C))LLLLLT_	nc|ENSG859|P60507|ERVFC1	40.77816245573522	0.41113185337114944	3				NaN	NaN	0	NaN	1588	3066	4655
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4657	18.065	NaN	2390.9	30	0	697.13	0.106	+			19837	KEEDILDL	8	34	487.75587929745404	973.4972056617081	2	487.75750732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEEDILDL_	ENSG00000137941|ENST00000260505|TTLL7;ENST00000488014.5_1_1:84352960-84383379:-|nuORF;nc|ENSG00000137941|Q6ZT98-2|TTLL7;nc|ENSG00000137941|Q6ZT98-3|TTLL7;TTLL7|p.T522Lfs*19|1|0.33|ENSG00000137941|chr1:83917627-83917627|T/-|frameshift_variant	38.80614096846853	0.6637206697844082	3				NaN	NaN	0	NaN	1589	3066	4655
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4658	18.067	NaN	2417.1	30	0	368.46	0.047				-1	 	0	56	603.9515088503681	1808.8326971513043	3	603.9533081054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1590	3066	4655
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4670	18.092	NaN	2161.1	30	0	695.25	0.145	+			47120	VLNGSVTLTVI	11	45	372.5589939870205	1114.6551525612615	3	372.89141845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VLNGSVTLTVI_	ENST00000599504.5_1_19:40502974-40503061:+|nuORF	20.030474535948922	0.7766990143561855	3				NaN	NaN	0	NaN	1599	3069	4669
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4727	18.23	NaN	3276.5	30	0	437.88	0.214				-1	 	0	56	488.29400971669975	974.5734665001995	2	488.2957763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1641	3084	4726
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4728	18.233	NaN	1121.1	30	0	469.04	0.035	+			4081	ATDKTFVEK	9	36	519.778564453125	NaN	0	519.778564453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATDKTFVEK_	ENSG00000133026|ENST00000360416|MYH10;nc|ENSG00000133026|P35580-2|MYH10;nc|ENSG00000133026|P35580-3|MYH10;nc|ENSG00000133026|P35580-5|MYH10;nc|ENSG00000133026|P35580|MYH10	70.8162118820467	0.10318768208603292	3				NaN	NaN	0	NaN	1642	3084	4726
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4740	18.259	NaN	1051.4	30	0	416.39	0.14	+			49025	VVGSLNVN	8	31	401.2274169921875	NaN	0	401.2274169921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVGSLNVN_	ENSG00000106780|ENST00000373930|MEGF9	42.47446043378293	1.7418937515398478	3				NaN	NaN	0	NaN	1651	3087	4739
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4760	18.308	NaN	1464.7	30	0	424.72	0.142	+			35621	SCCPVGCSK	9	32	470.68615067232656	939.3577484114531	2	470.6885070800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SCC(Carbamidomethyl (C))PVGCSK_	ENSG00000198417|ENST00000334350|MT1F;ENST00000564295.1_1_16:56692857-56693073:+|nuORF	51.19269402634007	0.2889735674168909	3				NaN	NaN	0	NaN	1665	3093	4759
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4781	18.358	NaN	20201	30	0	2397.6	0.214	+			45144	TVLPFEAMPR	10	68	387.54263754834756	1159.6060832452426	3	387.54412841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVLPFEAMPR_	CYP11B1|p.Q426Sfs*4|1|0.26|ENSG00000160882|chr8:142875079-142875079|G/-|frameshift_variant;ENSG00000160882|ENST00000292427|CYP11B1;nc|ENSG00000160882|P15538-2|CYP11B1	38.753607047826485	0.5606299674732264	3				NaN	NaN	0	NaN	1680	3099	4780
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4782	18.362	NaN	2586.6	30	0	1135.3	0.033			+	47718	VSFMKKGP	8	37	447.2491048016202	892.4836566700404	2	447.25079345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSFMKKGP_	REV__ENST00000521293.5_1_8:74529642-74659041:-|nuORF	26.79610172149135	0.7524337208463756	3				NaN	NaN	0	NaN	1681	3099	4780
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4793	18.385	NaN	1371.9	30	0	238.58	0.143	+			21054	KKKTNSSTP	9	44	495.7807129543888	989.5468729755776	2	495.7828063964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KKKTNSSTP_	ENSG00000239642|ENST00000442687|MEIKIN	42.396135135203025	0.392153681582562	3				NaN	NaN	0	NaN	1689	3102	4792
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4816	18.439	NaN	10027	30	0	3624.7	0.214			+	44241	TRVFTDPSK	9	69	525.7820810824055	1049.549609231611	2	525.7855834960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TRVFTDPSK_	REV__ENSG00000140374|ENST00000557943|ETFA;REV__ENST00000559075.5_1_15:76523658-76603729:-|nuORF;REV__ENST00000559758.5_1_15:76566725-76584849:-|nuORF;REV__ENST00000561092.1_1_15:76580145-76584849:-|nuORF;REV__nc|ENSG00000140374|P13804-2|ETFA	77.31757898189308	0.1091473830098891	3				NaN	NaN	0	NaN	1706	3108	4815
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4817	18.442	NaN	2906.2	30	0	265.36	0.038			+	-1	SFFASVAPMEP	11	61	599.7742438499695	1197.5339347667389	2	599.77685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_SFFASVAPM(Oxidation (M))EP_	REV__ENSG00000114439|ENST00000325805|BBX;REV__nc|ENSG00000114439|Q8WY36-2|BBX	62.107414245175825	0.30464354921554965	3				NaN	NaN	0	NaN	1707	3108	4815
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4827	18.464	NaN	1480.2	30	0	414.46	0.214			+	44715	TTLDTTKK	8	44	454.2586009370982	NaN	0	454.2581481933594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTLDTTKK_	REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-10|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-13|TTN;REV__nc|ENSG00000155657|Q8WZ42-2|TTN;REV__nc|ENSG00000155657|Q8WZ42-3|TTN;REV__nc|ENSG00000155657|Q8WZ42-4|TTN;REV__nc|ENSG00000155657|Q8WZ42-5|TTN;REV__nc|ENSG00000155657|Q8WZ42-6|TTN;REV__nc|ENSG00000155657|Q8WZ42-7|TTN;REV__nc|ENSG00000155657|Q8WZ42-8|TTN;REV__nc|ENSG00000155657|Q8WZ42-9|TTN;REV__nc|ENSG00000155657|Q8WZ42|TTN;REV__TTN|p.A12650Gfs*4|1|0.4|ENSG00000155657|chr2:178633489-178633490|-/T|frameshift_variant;REV__TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;REV__TTN|p.A7105Cfs*8|1|0.32|ENSG00000155657|chr2:178722523-178722524|-/A|frameshift_variant;REV__TTN|p.D20259Rfs*40|1|0.44|ENSG00000155657|chr2:178583105-178583106|-/T|frameshift_variant;REV__TTN|p.D21555Ifs*6|1|0.33|ENSG00000155657|chr2:178576659-178576659|G/-|frameshift_variant;REV__TTN|p.D2189Tfs*17|1|0.23|ENSG00000155657|chr2:178775147-178775147|T/-|frameshift_variant;REV__TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;REV__TTN|p.D9026Afs*9|1|0.26|ENSG00000155657|chr2:178711205-178711208|CTGT/-|frameshift_variant;REV__TTN|p.E15132Sfs*22|1|0.27|ENSG00000155657|chr2:178612094-178612094|C/-|frameshift_variant;REV__TTN|p.E20392Dfs*6|1|0.04|ENSG00000155657|chr2:178582357-178582358|-/TTTAAAATTA|frameshift_variant;REV__TTN|p.E20392Kfs*4|1|0.02|ENSG00000155657|chr2:178582359-178582360|-/TTTT|frameshift_variant;REV__TTN|p.E9224Gfs*8|1|0.04|ENSG00000155657|chr2:178709697-178709698|-/TCTTATGATATCTTGAC|frameshift_variant;REV__TTN|p.F18705Lfs*8|1|0.37|ENSG00000155657|chr2:178590687-178590687|A/-|frameshift_variant;REV__TTN|p.G12742Vfs*2|1|0.05|ENSG00000155657|chr2:178632983-178632983|C/-|frameshift_variant;REV__TTN|p.G14712Dfs*11|1|0.37|ENSG00000155657|chr2:178614341-178614341|G/-|frameshift_variant;REV__TTN|p.G19920Afs*12|1|0.42|ENSG00000155657|chr2:178584961-178584961|G/-|frameshift_variant;REV__TTN|p.G22029Efs*22|2|0.13|ENSG00000155657|chr2:178575125-178575125|T/-|frameshift_variant;REV__TTN|p.I10495Nfs*4|1|0.37|ENSG00000155657|chr2:178685288-178685289|-/T|frameshift_variant;REV__TTN|p.I24998Nfs*2|1|0.35|ENSG00000155657|chr2:178566216-178566217|-/T|frameshift_variant;REV__TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;REV__TTN|p.I3592Lfs*36|1|0.25|ENSG00000155657|chr2:178741508-178741508|T/-|frameshift_variant;REV__TTN|p.I9225Cfs*34|1|0.06|ENSG00000155657|chr2:178709695-178709696|-/ATATCCATGAGCA|frameshift_variant;REV__TTN|p.K10923Rfs*104|2|0.23|ENSG00000155657|chr2:178679362-178679362|T/-|frameshift_variant;REV__TTN|p.K11381Nfs*25|1|0.07|ENSG00000155657|chr2:178671133-178671133|T/-|frameshift_variant;REV__TTN|p.K11556Sfs*15|1|0.39|ENSG00000155657|chr2:178652287-178652287|T/-|frameshift_variant;REV__TTN|p.K14271Qfs*5|1|0.02|ENSG00000155657|chr2:178617351-178617352|-/G|frameshift_variant;REV__TTN|p.K26626Nfs*34|1|0.34|ENSG00000155657|chr2:178561331-178561331|T/-|frameshift_variant;REV__TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;REV__TTN|p.K4988Ifs*4|1|0.06|ENSG00000155657|chr2:178733381-178733382|-/GAAAATGATG|frameshift_variant;REV__TTN|p.L1709Tfs*7|2|0.3|ENSG00000155657|chr2:178776739-178776740|-/T|frameshift_variant;REV__TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;REV__TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant;REV__TTN|p.L7142*|1|0.06|ENSG00000155657|chr2:178722407-178722411|TCTTA/-|frameshift_variant;REV__TTN|p.M4154Nfs*4|1|0.21|ENSG00000155657|chr2:178739821-178739822|-/T|frameshift_variant;REV__TTN|p.N13487Tfs*49|1|0.34|ENSG00000155657|chr2:178621335-178621335|T/-|frameshift_variant;REV__TTN|p.N15496Ifs*16|1|0.09|ENSG00000155657|chr2:178610116-178610116|T/-|frameshift_variant;REV__TTN|p.N2114Mfs*25|1|0.05|ENSG00000155657|chr2:178775523-178775523|T/-|frameshift_variant;REV__TTN|p.N6458Mfs*74|1|0.44|ENSG00000155657|chr2:178725998-178725998|T/-|frameshift_variant;REV__TTN|p.N7648Tfs*27|1|0.32|ENSG00000155657|chr2:178719598-178719598|T/-|frameshift_variant;REV__TTN|p.N8964Tfs*27|1|0.11|ENSG00000155657|chr2:178711988-178711988|T/-|frameshift_variant;REV__TTN|p.P1407Lfs*5|1|0.18|ENSG00000155657|chr2:178777964-178777965|-/GA|frameshift_variant;REV__TTN|p.P16126Rfs*3|1|0.25|ENSG00000155657|chr2:178607301-178607302|TG/-|frameshift_variant;REV__TTN|p.P22810Hfs*10|1|0.03|ENSG00000155657|chr2:178572780-178572781|-/AAAT|frameshift_variant;REV__TTN|p.P4036Qfs*14|1|0.19|ENSG00000155657|chr2:178740175-178740175|G/-|frameshift_variant;REV__TTN|p.S2859Qfs*30|1|0.21|ENSG00000155657|chr2:178770127-178770127|G/-|frameshift_variant;REV__TTN|p.S5235Hfs*25|1|0.06|ENSG00000155657|chr2:178732315-178732316|-/ATATATG|frameshift_variant;REV__TTN|p.T4116Sfs*25|1|0.04|ENSG00000155657|chr2:178739937-178739938|-/CTATTATATATGAGGAA|frameshift_variant;REV__TTN|p.V10632Yfs*16|1|0.16|ENSG00000155657|chr2:178683254-178683254|T/-|frameshift_variant;REV__TTN|p.V11008Sfs*13|1|0.33|ENSG00000155657|chr2:178678146-178678147|-/T|frameshift_variant;REV__TTN|p.V11345Ffs*4|1|0.4|ENSG00000155657|chr2:178672044-178672044|T/-|frameshift_variant;REV__TTN|p.V13823*|1|0.28|ENSG00000155657|chr2:178620027-178620027|C/-|frameshift_variant;REV__TTN|p.V1964Wfs*14|1|0.32|ENSG00000155657|chr2:178775975-178775975|T/-|frameshift_variant;REV__TTN|p.V22573Cfs*4|2|0.31|ENSG00000155657|chr2:178573492-178573492|C/-|frameshift_variant;REV__TTN|p.V27442Cfs*4|1|0.05|ENSG00000155657|chr2:178558107-178558108|-/A|frameshift_variant;REV__TTN|p.W5728Mfs*3|1|0.07|ENSG00000155657|chr2:178730267-178730268|-/T|frameshift_variant	40.5726180659479	1.7418937515398478	3				NaN	NaN	0	NaN	1714	3111	4826
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4828	18.468	NaN	6440.2	30	0	1086.5	0.034	+			9456	EKMPLLTL	8	56	472.77814667791495	943.5417404226299	2	472.7796630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EKMPLLTL_	ENST00000469092.5_1_17:72701487-72709092:-|nuORF;ENST00000583544.1_1_17:72700560-72709059:-|nuORF	51.33545320467046	0.5859736979383976	3				NaN	NaN	0	NaN	1715	3111	4826
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4841	18.495	NaN	11090	30	0	2636.3	0.214			+	44364	TSKKMKKMR	9	63	379.89127243061176	1136.6519878920353	3	379.89263916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSKKMKKMR_	REV__tr|U7STE9|U7STE9_FUSNUD-3-phosphoglyceratedehydrogenaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01033PE=3SV=1	45.97224482568171	0.3502073465782774	3				NaN	NaN	0	NaN	1725	3114	4840
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4842	18.498	NaN	2756	30	0	396.43	0.035			+	25223	LMVLDFVK	8	45	490.7782950003913	979.5420370675827	2	490.77984619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LM(Oxidation (M))VLDFVK_	REV__ENSG00000144554|ENST00000675286|FANCD2;REV__FANCD2|p.H377Y|1|0.27|ENSG00000144554|chr3:10043859-10043859|C/T|missense_variant;REV__FANCD2|p.I1249Nfs*2|1|0.48|ENSG00000144554|chr3:10090346-10090347|-/A|frameshift_variant;REV__FANCD2|p.N890Ifs*14|1|0.36|ENSG00000144554|chr3:10073312-10073312|A/-|frameshift_variant;REV__nc|ENSG00000144554|Q9BXW9-1|FANCD2;REV__nc|ENSG00000144554|Q9BXW9-3|FANCD2	44.53106598305862	0.628196326904373	3				NaN	NaN	0	NaN	1726	3114	4840
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4854	18.524	NaN	1547.8	30	0	170.18	0.214	+			12711	GEKSVHEGAL	10	51	513.7649219055601	NaN	0	513.7653198242188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEKSVHEGAL_	ENSG00000079819|ENST00000337057|EPB41L2	76.16968421966216	0.118310876128328	3				NaN	NaN	0	NaN	1735	3117	4853
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4855	18.527	NaN	1167.7	30	0	137.76	0.033			+	116	AAEYSLNK	8	45	448.22967529296875	NaN	0	448.22967529296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAEYSLNK_	REV__CDH16|p.K563Sfs*22|2|0.25|ENSG00000166589|chr16:66912003-66912003|G/-|frameshift_variant;REV__ENSG00000166589|ENST00000299752|CDH16;REV__nc|ENSG00000166589|O75309-2|CDH16;REV__nc|ENSG00000166589|O75309-3|CDH16;REV__nc|ENSG00000166589|O75309-4|CDH16	30.503639358989545	1.7418937515398478	3				NaN	NaN	0	NaN	1736	3117	4853
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4869	18.555	NaN	28554	30	0	8884.8	0.214	+			40306	STSSSSSGKK	10	68	478.2383714740401	954.4621900148802	2	478.239990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STSSSSSGKK_	EML1|p.D325*|1|0.12|ENSG00000066629|chr14:99900996-99900997|-/T|frameshift_variant;EML1|p.Y396Lfs*12|1|0.06|ENSG00000066629|chr14:99909426-99909427|-/TAAG|frameshift_variant;ENSG00000066629|ENST00000262233|EML1;ENST00000556758.1_1_14:100317215-100349650:+|nuORF;nc|ENSG00000066629|O00423-3|EML1	88.17693792209575	0.14151128060301246	3				NaN	NaN	0	NaN	1747	3120	4868
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4870	18.559	NaN	2768.6	30	0	1094.7	0.106			+	27280	MGAAPAQLR	9	48	457.74820328607643	913.4818536389529	2	457.75018310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MGAAPAQLR_	REV__ENST00000430262.2_1_17:47395344-47439458:-|nuORF	57.81127852772723	0.2318599694398087	3				NaN	NaN	0	NaN	1748	3120	4868
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4871	18.561	NaN	874.55	30	0	141.26	0.106	+			15963	HAHVDKVTY	9	40	535.2755759230881	NaN	0	535.275146484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HAHVDKVTY_	ENSG00000181396|ENST00000313056|OGFOD3;nc|ENSG00000181396|Q6PK18-2|OGFOD3	79.71258880314673	0.07236858429579222	3				NaN	NaN	0	NaN	1749	3120	4868
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4872	18.563	NaN	1917.7	30	0	285.47	0.035	+			41742	SVSKDVVVSK	10	54	524.303889407773	1046.593225882346	2	524.3059692382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVSKDVVVSK_	E4F1|p.E388Gfs*55|1|0.48|ENSG00000167967|chr16:2233539-2233540|-/G|frameshift_variant;E4F1|p.E717Rfs*3|1|0.25|ENSG00000167967|chr16:2235361-2235361|C/-|frameshift_variant;ENSG00000167967|ENST00000301727|E4F1;ENST00000569796.1_1_16:2282158-2283271:+|nuORF	125.68205650279488	0.01930466848182481	3				NaN	NaN	0	NaN	1750	3120	4868
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4883	18.587	NaN	4829.9	30	0	1268.2	0.141	+			3687	ATAAAAATAF	10	46	433.2244501695646	864.4343474059292	2	433.22601318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATAAAAATAF_	ENSG00000148584|ENST00000373997|A1CF;nc|ENSG00000148584|Q9NQ94-3|A1CF;nc|ENSG00000148584|Q9NQ94-4|A1CF;nc|ENSG00000148584|Q9NQ94-5|A1CF;nc|ENSG00000148584|Q9NQ94-6|A1CF;nc|ENSG00000148584|Q9NQ94|A1CF	58.78195531508484	0.37691818691852547	3				NaN	NaN	0	NaN	1758	3123	4882
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4901	18.625	NaN	7088.2	30	0	2905	0.144	+			19933	KEFEQLQK	8	67	525.2843093721054	1048.5540658110108	2	525.287841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEFEQLQK_	ENSG00000253797|ENST00000521776|UTP14C	98.62937762414208	0.25143494708580966	3				NaN	NaN	0	NaN	1773	3126	4900
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4913	18.652	NaN	3346.3	30	0	770.01	0.142	+			6248	AVSHRQRL	8	57	483.7827166544626	965.5508803757252	2	483.78460693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVSHRQRL_	ENSG00000145916|ENST00000313386|RMND5B;ENST00000515360.5_1_5:177569546-177575030:+|nuORF;nc|ENSG00000145916|Q96G75-2|RMND5B	60.29395666154354	0.49887135096048313	3				NaN	NaN	0	NaN	1782	3129	4912
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4925	18.679	NaN	12569	30	0	2074.3	0.143	+			22857	KVKFINEQ	8	65	503.28960985680186	1004.5646667804037	2	503.2918701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVKFINEQ_	DNAH8|p.D4227Afs*7|1|0.04|ENSG00000124721|chr6:39008929-39008930|-/CAGTGTT|frameshift_variant;DNAH8|p.Q3444Rfs*16|1|0.31|ENSG00000124721|chr6:38926073-38926073|C/-|frameshift_variant;DNAH8|p.V3263Sfs*23|1|0.16|ENSG00000124721|chr6:38918047-38918048|-/A|frameshift_variant;DNAH8|p.V3263Sfs*28|1|0.47|ENSG00000124721|chr6:38918048-38918048|A/-|frameshift_variant;ENSG00000124721|ENST00000327475|DNAH8;nc|ENSG00000124721|Q96JB1-2|DNAH8;nc|ENSG00000124721|Q96JB1|DNAH8	102.7733458925114	0.2491487235419157	3				NaN	NaN	0	NaN	1791	3132	4924
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4959	18.76	NaN	9046.7	30	0	2934.7	0.214	+			16437	HESGHAIIA	9	54	467.7407824317719	NaN	0	467.74078369140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HESGHAIIA_	ENSG00000136758|ENST00000376016|YME1L1;nc|ENSG00000136758|Q96TA2-3|YME1L1;nc|ENSG00000136758|Q96TA2|YME1L1	76.84663266511073	0.08218905260741291	3				NaN	NaN	0	NaN	1816	3141	4958
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4960	18.764	NaN	2249.8	30	0	251.39	0.034				-1	KAVPLPMAV	9	49	471.2779314944607	940.5413100557214	2	471.2804260253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_KAVPLPM(Oxidation (M))AV_	PHYHIPL|p.T117A|1|0.25|ENSG00000165443|chr10:59236528-59236528|A/G|missense_variant	38.80614096846853	0.43426287593479557	3				NaN	NaN	0	NaN	1817	3141	4958
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4975	18.795	NaN	5573	30	0	1980.5	0.14	+			45943	VASAAKLGA	9	39	394.2359913692276	786.4574298052552	2	394.2373962402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VASAAKLGA_	ENSG00000170835|ENST00000372080|CEL;nc|ENSG00000170835|P19835-2|CEL	44.116797842482775	0.37197099687881774	3				NaN	NaN	0	NaN	1829	3144	4974
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4988	18.824	NaN	14427	30	0	3342.8	0.214	+			7913	DSEGSTKVL	9	69	468.23608597371424	934.4576190142285	2	468.2374572753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DSEGSTKVL_	ENSG00000185658|ENST00000342449|BRWD1;nc|ENSG00000185658|Q9NSI6-3|BRWD1;nc|ENSG00000185658|Q9NSI6|BRWD1	77.31757898189308	0.1091473830098891	3				NaN	NaN	0	NaN	1839	3147	4987
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4989	18.828	NaN	11989	30	0	4775.1	0.106				-1	 	0	59	417.23838639076234	832.4622198483247	2	417.239990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1840	3147	4987
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4990	18.83	NaN	741.19	30	0	198.16	0.034				-1	GESVKKMR	8	29	475.7606737330674	NaN	0	475.7610778808594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_GESVKKM(Oxidation (M))R_	ENSG00000197111|ENST00000546463|PCBP2;ENST00000547717.1_1_12:53848575-53861193:+|nuORF;nc|ENSG00000197111|Q15366-2|PCBP2;nc|ENSG00000197111|Q15366-4|PCBP2;nc|ENSG00000197111|Q15366-5|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;nc|ENSG00000197111|Q15366-7|PCBP2;nc|ENSG00000197111|Q15366-8|PCBP2;nc|ENSG00000197111|Q15366|PCBP2;PCBP2|p.T202Kfs*26|1|0.32|ENSG00000197111|chr12:53464773-53464773|C/-|frameshift_variant	40.5726180659479	1.7418937515398478	3				NaN	NaN	0	NaN	1841	3147	4987
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5002	18.855	NaN	349.96	30	0	64.453	0.214	+			29650	PGLAGKNG	8	22	357.2003173828125	NaN	0	357.2003173828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PGLAGKNG_	COL6A2|p.P584Lfs*12|1|0.46|ENSG00000142173|chr21:46124896-46124896|C/-|frameshift_variant;ENSG00000142173|ENST00000300527|COL6A2;nc|ENSG00000142173|P12110-2|COL6A2;nc|ENSG00000142173|P12110-3|COL6A2	28.2542754592877	1.7418937515398478	3				NaN	NaN	0	NaN	1850	3150	5001
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5003	18.858	NaN	7751.8	30	0	2705.3	0.106	+			46717	VGLVTMFK	8	55	447.75947167105153	893.5043904089031	2	447.7610778808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VGLVTMFK_	sp|F5H9I4|US13_HCMVMMembraneproteinUS13OS=Humancytomegalovirus(strainMerlin)OX=295027GN=US13PE=3SV=1;sp|P09720|US13_HCMVAUncharacterizedproteinHVLF5OS=Humancytomegalovirus(strainAD169)OX=10360GN=US13PE=3SV=1	45.9519527083369	0.6193794311207887	3				NaN	NaN	0	NaN	1851	3150	5001
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5004	18.86	NaN	2197.9	30	0	245.56	0.106				-1	 	0	48	408.2332189816082	814.4518850300165	2	408.2344055175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1852	3150	5001
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5005	18.862	NaN	4594.8	30	0	1273.1	0.106			+	31724	QNYDVNQT	8	52	491.2177810359811	NaN	0	491.2171630859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QNYDVNQT_	REV__nc|ENSG809|P63128|ERVK-9_pol;REV__nc|ENSG810|P63126|ERVK-9_gag;REV__nc|ENSG816|P62685|ERVK-8_gag;REV__nc|ENSG820|P63130|ERVK-7_gag;REV__nc|ENSG827|Q7LDI9|ERVK-6_gag;REV__nc|ENSG829|Q9HDB9|ERVK-5_gag;REV__nc|ENSG838|P63145|ERVK-24_gag;REV__nc|ENSG841|P62683|ERVK-21_gag;REV__nc|ENSG846|Q9YNA8|ERVK-19_gag;REV__nc|ENSG856|P87889|ERVK-10_gag	34.172542307311794	1.7418937515398478	3				NaN	NaN	0	NaN	1853	3150	5001
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5006	18.864	NaN	1778	30	0	373.05	0.035	+			611	ADSKLHGKF	9	45	501.7716557595516	1001.5287585859032	2	501.77362060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ADSKLHGKF_	BMP1|p.V817Sfs*52|1|0.34|ENSG00000168487|chr8:22207385-22207385|C/-|frameshift_variant;ENSG00000168487|ENST00000306385|BMP1;ENST00000354870.5_1_8:22035226-22069238:+|nuORF;ENST00000518913.5_1_8:22034120-22058713:+|nuORF;ENST00000520982.5_1_8:22034120-22069238:+|nuORF;nc|ENSG00000168487|P13497-2|BMP1;nc|ENSG00000168487|P13497-5|BMP1;nc|ENSG00000168487|P13497-6|BMP1	29.14955571784316	0.5308295550522326	3				NaN	NaN	0	NaN	1854	3150	5001
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5021	18.895	NaN	913.02	30	0	308.22	0.214			+	17934	IGLTFWIPQ	9	28	537.8062318460287	NaN	0	537.8059692382812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IGLTFWIPQ_	REV__ENSG00000106080|ENST00000222803|FKBP14;REV__ENST00000479939.1_1_7:30062251-30066124:-|nuORF	12.811709888998246	0.3936198799427492	3				NaN	NaN	0	NaN	1866	3153	5020
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5022	18.899	NaN	3841.5	30	0	732.62	0.106			+	8455	EARVKKGCH	9	60	514.2779628799257	1026.5413728266512	2	514.2801513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EARVKKGCH_	REV__ENSG00000115464|ENST00000398571|USP34;REV__ENST00000463046.5_1_2:61463458-61483580:-|nuORF;REV__nc|ENSG00000115464|Q70CQ2-2|USP34;REV__nc|ENSG00000115464|Q70CQ2-3|USP34;REV__USP34|p.L2716Sfs*30|1|0.05|ENSG00000115464|chr2:61214596-61214597|-/AAGCTGA|frameshift_variant;REV__USP34|p.L3228*|1|0.22|ENSG00000115464|chr2:61190564-61190564|A/-|frameshift_variant	74.25504064058377	0.12238981753128622	3				NaN	NaN	0	NaN	1867	3153	5020
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5023	18.901	NaN	2197.9	30	0	435.76	0.033	+			5692	AVEQKGLQ	8	47	436.74562784451024	NaN	0	436.7455749511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVEQKGLQ_	ENSG00000136002|ENST00000409359|ARHGEF4	60.97194046774394	1.7418937515398478	3				NaN	NaN	0	NaN	1868	3153	5020
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5040	18.935	NaN	16030	30	0	4279.3	0.141				-1	 	0	60	431.2541995921589	860.4938462511178	2	431.2552795410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1882	3156	5039
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5053	18.964	NaN	4383.1	30	0	1190.6	0.142				-1	 	0	61	488.29403277312656	974.5735126130531	2	488.2954406738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1892	3159	5052
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5065	18.991	NaN	1253.1	30	0	174.6	0.214				-1	RTCGEVIVK	9	40	531.290681089786	1060.5668092463718	2	531.2929077148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_RTC(Carbamidomethyl (C))GEVIVK_	ENSG00000162702|ENST00000367353|ZNF281;nc|ENSG00000162702|Q9Y2X9-2|ZNF281	37.50817390946774	0.44948750990682723	3				NaN	NaN	0	NaN	1901	3162	5064
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5066	18.995	NaN	1478.4	30	0	920.9	0.036	+			46695	VGKVVNPTQA	10	20	338.1978454589844	NaN	0	338.1978454589844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VGKVVNPTQA_	CON__P34955	16.473147378115264	0.4201028297492154	3				NaN	NaN	0	NaN	1902	3162	5064
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5079	19.022	NaN	15064	30	0	5195.5	0.214			+	30513	QAGEQVKRL	9	66	514.7960805452337	1027.5776081572674	2	514.7987060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QAGEQVKRL_	REV__ENSG00000116525|ENST00000291416|TRIM62;REV__nc|ENSG00000116525|Q9BVG3-2|TRIM62	96.19043198914106	0.047412499214244314	3				NaN	NaN	0	NaN	1912	3165	5078
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5080	19.026	NaN	1748.7	30	0	529.71	0.106				-1	 	0	41	417.23838639076234	832.4622198483247	2	416.9031982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1913	3165	5078
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5081	19.028	NaN	792.59	30	0	243.92	0.106	+			20915	KITSELSTA	9	25	475.2617550634223	948.5089571936446	2	475.2637023925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KITSELSTA_	ENST00000499227.6_1_8:71520990-71564086:+|nuORF;ENST00000519358.5_1_8:71520990-71543348:+|nuORF	23.04248740728303	0.5879033540491928	3				NaN	NaN	0	NaN	1914	3165	5078
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5082	19.029	NaN	1892.6	30	0	237.1	0.039			+	34740	RWTKSTQRTQ	10	38	431.23293638844126	1290.6769797655238	3	431.2354736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RWTKSTQRTQ_	REV__ENST00000567224.1_1_15:53809927-53815498:-|nuORF	28.5767321226876	0.6464621404813697	3				NaN	NaN	0	NaN	1915	3165	5078
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5093	19.055	NaN	5924.8	30	0	3348.7	0.214			+	37324	SLDWVNLR	8	30	334.8501998543512	1001.5287701632537	3	334.8516845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLDWVNLR_	REV__ENSG00000102054|ENST00000380087|RBBP7;REV__ENSG00000162521|ENST00000373493|RBBP4;REV__nc|ENSG00000102054|Q16576-2|RBBP7;REV__nc|ENSG00000162521|Q09028-2|RBBP4;REV__nc|ENSG00000162521|Q09028-3|RBBP4;REV__nc|ENSG00000162521|Q09028-4|RBBP4;REV__RBBP7|p.I349N|1|0.18|ENSG00000102054|chrX:16849296-16849296|A/T|missense_variant	19.359975847455235	0.7988239741663654	3				NaN	NaN	0	NaN	1923	3168	5092
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5094	19.058	NaN	2210.1	30	0	652.17	0.106				-1	 	0	49	402.7253897106351	803.4362264880702	2	402.7267150878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1924	3168	5092
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5095	19.06	NaN	525.99	30	0	287.39	0.038			+	-1	SAPCAAEFFW	10	17	395.8402099609375	NaN	0	395.8402099609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SAPC(Carbamidomethyl (C))AAEFFW_	REV__DENND1C|p.G479Afs*3|2|0.28|ENSG00000205744|chr19:6468925-6468925|C/-|frameshift_variant;REV__DENND1C|p.I31Sfs*81|1|0.15|ENSG00000205744|chr19:6479895-6479895|G/-|frameshift_variant;REV__DENND1C|p.S553Lfs*8|1|0.17|ENSG00000205744|chr19:6468369-6468369|C/-|frameshift_variant;REV__ENSG00000205744|ENST00000381480|DENND1C	22.579656572578934	0.4201028297492154	3				NaN	NaN	0	NaN	1925	3168	5092
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5107	19.086	NaN	878.16	30	0	220.13	0.139	+			45997	VAVAGILN	8	32	378.73401451458534	NaN	0	378.7342224121094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VAVAGILN_	ENSG00000149403|ENST00000527524|GRIK4;ENST00000533291.5_1_11:120531027-120833419:+|nuORF;GRIK4|p.T481Rfs*6|1|0.57|ENSG00000149403|chr11:120905452-120905468|AACGGCACCTGGACGGG/-|frameshift_variant	54.76467175910256	1.7418937515398478	3				NaN	NaN	0	NaN	1934	3171	5106
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5120	19.114	NaN	1201.7	30	0	200.06	0.214				-1	TWYRHYRCCRQ	11	42	576.5912475585938	NaN	0	576.5912475585938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term),2 Carbamidomethyl (C)	_(Acetyl (Protein N-term))TWYRHYRC(Carbamidomethyl (C))C(Carbamidomethyl (C))RQ_	ENST00000448464.6_1_8:95941986-95942052:-|nuORF	3.211326085083802	0.456735970842152	3				NaN	NaN	0	NaN	1944	3174	5119
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5121	19.118	NaN	2267.9	30	0	387.96	0.106	+			16447	HESRQITQV	9	58	549.2865601221156	1096.558567311031	2	549.290283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HESRQITQV_	ENSG00000104695|ENST00000221138|PPP2CB;ENSG00000113575|ENST00000481195|PPP2CA;ENSG00000119414|ENST00000373547|PPP6C;ENSG00000149923|ENST00000279387|PPP4C;ENST00000566749.5_1_16:30094185-30096380:+|nuORF;ENST00000567040.5_1_16:30087698-30094972:+|nuORF;nc|ENSG00000113575|P67775-2|PPP2CA;nc|ENSG00000119414|O00743-2|PPP6C;nc|ENSG00000119414|O00743-3|PPP6C	93.1432384553994	0.056003526918089595	3				NaN	NaN	0	NaN	1945	3174	5119
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5122	19.12	NaN	1163.5	30	0	163.53	0.034	+			21277	KLPEKSSK	8	47	458.7765197753906	NaN	0	458.7765197753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KLPEKSSK_	RNF141|p.V20Sfs*17|1|0.17|ENSG00000110315|chr11:10534101-10534102|-/T|frameshift_variant	45.9519527083369	1.7418937515398478	3				NaN	NaN	0	NaN	1946	3174	5119
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5136	19.149	NaN	12425	30	0	3649.9	0.215			+	-1	CSCEGVRN	8	55	462.68769168760787	923.3608304420158	2	462.6899719238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_CSC(Carbamidomethyl (C))EGVRN_	REV__ENSG00000065534|ENST00000360304|MYLK;REV__MYLK|p.P1126Qfs*8|1|0.11|ENSG00000065534|chr3:123700091-123700091|G/-|frameshift_variant;REV__MYLK|p.R823Gfs*27|1|0.14|ENSG00000065534|chr3:123701002-123701002|C/-|frameshift_variant;REV__nc|ENSG00000065534|Q15746-2|MYLK;REV__nc|ENSG00000065534|Q15746-3|MYLK;REV__nc|ENSG00000065534|Q15746-4|MYLK;REV__nc|ENSG00000065534|Q15746-5|MYLK;REV__nc|ENSG00000065534|Q15746-6|MYLK	37.15910966729921	0.6739408393984688	3				NaN	NaN	0	NaN	1957	3177	5135
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5137	19.153	NaN	722.14	30	0	80.742	0.106			+	32995	REESKKVV	8	36	487.78466796875	NaN	0	487.78466796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_REESKKVV_	REV__ENSG00000179119|ENST00000336349|SPTY2D1;REV__ENST00000536336.5_1_11:18633859-18655855:-|nuORF;REV__nc|ENSG00000179119|Q68D10-2|SPTY2D1;REV__nc|ENSG00000179119|Q68D10-3|SPTY2D1;REV__SPTY2D1|p.P485Rfs*12|1|0.3|ENSG00000179119|chr11:18614820-18614820|G/-|frameshift_variant	33.51558372728122	1.7418937515398478	3				NaN	NaN	0	NaN	1958	3177	5135
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5138	19.155	NaN	1178.5	30	0	248.58	0.032				-1	 	0	38	406.23565785207086	810.4567627709417	2	406.237548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1959	3177	5135
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5163	19.213	NaN	30242	30	0	10481	0.214	+			32201	QSVSFLHGK	9	71	501.7716557595516	1001.5287585859032	2	501.7734680175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QSVSFLHGK_	nc|ENSG00000145934|Q9NT68-2|TENM2	122.1759843771914	0.019882474861609503	3				NaN	NaN	0	NaN	1978	3183	5162
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5164	19.216	NaN	854.08	30	0	164.59	0.033			+	26753	LVNSFQVG	8	30	432.2363586425781	NaN	0	432.2363586425781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LVNSFQVG_	REV__tr|U7SNH6|U7SNH6_FUSNUOutermembraneproteinbeta-barreldomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01762PE=4SV=1	24.20275056022122	1.7418937515398478	3				NaN	NaN	0	NaN	1979	3183	5162
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5175	19.242	NaN	1104.8	30	0	216.4	0.142	+			28648	NLHMTSSLA	9	43	487.24188232421875	NaN	0	487.24188232421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NLHMTSSLA_	ENSG00000128908|ENST00000648947|INO80;ENST00000558270.1_1_15:41272423-41275357:-|nuORF	44.116797842482775	0.2472372736944149	3				NaN	NaN	0	NaN	1987	3186	5174
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5190	19.274	NaN	15437	30	0	1811.8	0.214				-1	 	0	66	557.5816876519478	1669.7232335560434	3	557.5844116210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1999	3189	5189
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5191	19.278	NaN	1778.6	30	0	214.79	0.034			+	48608	VTRRTPRG	8	46	471.78255925492704	941.5505655766541	2	471.7840881347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTRRTPRG_	REV__ENST00000338573.9_2_16:21312284-21312482:+|nuORF	37.15910966729921	0.6739408393984688	3				NaN	NaN	0	NaN	2000	3189	5189
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5206	19.31	NaN	32611	30	0	12439	0.214			+	30327	PTRYLAKLGAQ	11	64	406.571051709457	1216.691325728571	3	406.5725402832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PTRYLAKLGAQ_	REV__ENSG00000168032|ENST00000301825|ENTPD3;REV__nc|ENSG00000168032|O75355-2|ENTPD3	33.921630207806714	0.6339809607503234	3				NaN	NaN	0	NaN	2012	3192	5205
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5207	19.313	NaN	2613.3	30	0	1068.4	0.106	+			14423	GTAPSLRPG	9	35	428.2377957747925	NaN	0	428.23785400390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTAPSLRPG_	ENST00000252136.11_2_22:20104501-20104702:-|nuORF	47.657333605630114	0.2228375344433429	3				NaN	NaN	0	NaN	2013	3192	5205
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5208	19.315	NaN	4700.4	30	0	758.96	0.034	+			4945	ATQQRRAQ	8	55	479.7618577752511	957.5091626173022	2	479.7632141113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATQQRRAQ_	ENST00000480594.1_1_2:65245327-65245780:+|nuORF	63.30626980617807	0.4690498839812213	3				NaN	NaN	0	NaN	2014	3192	5205
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5223	19.346	NaN	2972.7	30	0	560.16	0.214	+			42275	TACVLRRS	8	45	453.2540283900589	904.4935038469179	2	453.2559509277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TACVLRRS_	ENSG00000145700|ENST00000506364|ANKRD31;nc|ENSG00000145700|Q8N7Z5|ANKRD31	63.30626980617807	0.4690498839812213	3				NaN	NaN	0	NaN	2026	3195	5222
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5224	19.35	NaN	755.26	30	0	170.16	0.106			+	13157	GGRKGRGP	8	31	392.73171428055844	NaN	0	392.7318420410156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GGRKGRGP_	REV__ENST00000553268.5_1_14:77787511-77793341:+|nuORF	20.481830146152948	1.741893751539848	3				NaN	NaN	0	NaN	2027	3195	5222
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5225	19.352	NaN	701.06	30	0	126.99	0.037				-1	CVPFLLLVQ	9	29	363.5451354980469	NaN	0	363.5451354980469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_C(Carbamidomethyl (C))VPFLLLVQ_	ENST00000534183.5_1_11:62105600-62156860:+|nuORF	39.252832667884924	0.27938773122138094	3				NaN	NaN	0	NaN	2028	3195	5222
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5238	19.379	NaN	2068.2	30	0	261.01	0.214	+			34958	SAAKSLLNK	9	54	466.28245760463176	NaN	0	466.2823486328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAAKSLLNK_	ENST00000474131.5_1_10:75577276-75601951:-|nuORF;ENST00000492020.5_1_10:75597207-75607060:-|nuORF;nc|ENSG00000058404|Q13554-3|CAMK2B;nc|ENSG00000058404|Q13554-4|CAMK2B;nc|ENSG00000058404|Q13554-5|CAMK2B;nc|ENSG00000148660|Q13555-10|CAMK2G;nc|ENSG00000148660|Q13555-2|CAMK2G;nc|ENSG00000148660|Q13555-3|CAMK2G;nc|ENSG00000148660|Q13555-4|CAMK2G;nc|ENSG00000148660|Q13555-7|CAMK2G;nc|ENSG00000148660|Q13555-8|CAMK2G;nc|ENSG00000148660|Q13555-9|CAMK2G;nc|ENSG00000148660|Q13555|CAMK2G	59.93077597824379	0.14961415694175798	3				NaN	NaN	0	NaN	2038	3198	5237
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5239	19.383	NaN	1073.2	30	0	206.46	0.106	+			16128	HEAATKAVL	9	45	470.2667236328125	NaN	0	470.2667236328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HEAATKAVL_	DHRS7|p.D149Ifs*2|1|0.07|ENSG00000100612|chr14:60153127-60153128|-/ATAT|frameshift_variant;ENSG00000100612|ENST00000557185|DHRS7;ENST00000556502.1_1_14:60619584-60632027:-|nuORF;nc|ENSG00000100612|Q9Y394-2|DHRS7	62.107414245175825	0.1403307765918332	3				NaN	NaN	0	NaN	2039	3198	5237
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5240	19.385	NaN	766.77	30	0	109.75	0.04	+			41619	SVQLTEKRMDK	11	36	445.5748291015625	NaN	0	445.5748291015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVQLTEKRMDK_	C3|p.A1045Pfs*26|1|0.09|ENSG00000125730|chr19:6694452-6694452|C/-|frameshift_variant;C3|p.S1008Rfs*8|3|0.41|ENSG00000125730|chr19:6694564-6694564|G/-|frameshift_variant;ENSG00000125730|ENST00000245907|C3	24.231819034082204	0.456735970842152	3				NaN	NaN	0	NaN	2040	3198	5237
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5253	19.412	NaN	10188	30	0	3350.1	0.214				-1	AQRCMICQ	8	57	505.223416974805	1008.43228101641	2	505.2258605957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_AQRC(Carbamidomethyl (C))MICQ_	ENSG00000070366|ENST00000263073|SMG6	42.47446043378293	0.6409579893742323	3				NaN	NaN	0	NaN	2050	3201	5252
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5254	19.415	NaN	2000.5	30	0	258.04	0.035			+	-1	KRCGVQGVV	9	55	501.78143310546875	NaN	0	501.78143310546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_KRC(Carbamidomethyl (C))GVQGVV_	REV__ABCC1|p.G683R|1|0.39|ENSG00000103222|chr16:16079410-16079410|G/A|missense_variant	57.81127852772723	0.15865383123342353	3				NaN	NaN	0	NaN	2051	3201	5252
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5267	19.442	NaN	10572	30	0	1675.5	0.214				-1	 	0	62	429.2385540698044	856.4625552064089	2	429.2396240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2061	3204	5266
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5268	19.446	NaN	2502.2	30	0	285.34	0.035	+			25189	LMDARSNVL	9	58	509.77239572910054	1017.5302385250011	2	509.7747802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LMDARSNVL_	tr|U7SWP6|U7SWP6_FUSNUMembraneproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01126PE=4SV=1	75.04331003522576	0.118981335847003	3				NaN	NaN	0	NaN	2062	3204	5266
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5300	19.515	NaN	4002.6	30	0	1975.9	0.214			+	28514	NICRGLLVK	9	52	508.3088478146256	1014.6031426960512	2	508.3111877441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NICRGLLVK_	REV__ENSG00000057704|ENST00000261226|TMCC3	56.43379154798735	0.2433427591689151	3				NaN	NaN	0	NaN	2088	3210	5299
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5301	19.519	NaN	1955.4	30	0	627.75	0.034			+	7026	CSGNKCNQA	9	39	462.68769168760787	923.3608304420158	2	462.6902770996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_CSGNKCNQA_	REV__ENSG00000198960|ENST00000361910|ARMCX6	35.61828744233558	0.47037581924408073	3				NaN	NaN	0	NaN	2089	3210	5299
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5331	19.585	NaN	9527.5	30	0	3981.2	0.214				-1	 	0	61	472.75450884634523	943.4944647594905	2	472.75628662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2113	3216	5330
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5332	19.588	NaN	901.81	30	0	188.84	0.034	+			8689	EEAGGRPAM	9	38	459.2110290527344	NaN	0	459.2110290527344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EEAGGRPAM_	ENSG00000153187|ENST00000640218|HNRNPU;ENST00000476241.2_2_1:245025757-245027609:-|nuORF;nc|ENSG00000153187|Q00839-2|HNRNPU	65.80317337860623	0.12456833308499304	3				NaN	NaN	0	NaN	2114	3216	5330
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5347	19.619	NaN	1129.7	30	0	436.25	0.143	+			14388	GTAKSQFLK	9	38	490.2821337092997	NaN	0	490.28228759765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTAKSQFLK_	ENSG00000073111|ENST00000265056|MCM2;ENST00000474964.5_1_3:127323572-127340613:+|nuORF;ENST00000477668.5_1_3:127323572-127337961:+|nuORF	42.86426827375447	0.2558691296974908	3				NaN	NaN	0	NaN	2126	3219	5346
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5359	19.647	NaN	8336.2	30	0	1059.8	0.214				-1	 	0	64	470.78040897315765	939.5462650131153	2	470.7821960449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2135	3222	5358
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5360	19.65	NaN	30146	30	0	9360.7	0.106	+			25219	LMRKLGLKTGT	11	88	406.5854168453254	1216.7344211361763	3	406.5870361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LMRKLGLKTGT_	STAB2|p.F1633Lfs*22|1|0.36|ENSG00000136011|chr12:103727310-103727310|T/-|frameshift_variant	45.908116695636124	0.4771019740774998	3				NaN	NaN	0	NaN	2136	3222	5358
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5361	19.652	NaN	1203.6	30	0	215.39	0.106	+			15959	HAHHSPLPCD	10	34	557.2506055836213	1112.4866582340426	2	557.2531127929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HAHHSPLPCD_	ENST00000325147.13_1_11:203487-204003:-|nuORF;ENST00000433234.2_11:203487-204043:-|nuORF	35.61828744233558	0.588957954432594	3				NaN	NaN	0	NaN	2137	3222	5358
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5362	19.654	NaN	887.51	30	0	313.4	0.036	+			47991	VSPSRACSAVP	11	23	358.5185546875	NaN	0	358.5185546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSPSRACSAVP_	ENST00000471972.1_1_X:153668686-153669692:+|nuORF;ENST00000491154.1_1_X:153669338-153669692:+|nuORF	24.231819034082204	0.456735970842152	3				NaN	NaN	0	NaN	2138	3222	5358
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5375	19.681	NaN	1255.2	30	0	142.65	0.143	+			40193	STRKMMKK	8	49	505.2855028088502	1008.5564526845004	2	505.28741455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STRKMMKK_	ENST00000536889.1_1_X:102564780-102564858:-|nuORF	34.172542307311794	0.6954784234644539	3				NaN	NaN	0	NaN	2148	3225	5374
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5384	19.705	NaN	4014.3	30	0	662.62	0.144				-1	PRTCSGKGKM	10	64	540.7684205371697	1079.5222881411394	2	540.7710571289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_PRTCSGKGKM(Oxidation (M))_	ENST00000535812.1_1_12:66562688-66563015:-|nuORF	64.20726635412375	0.3275756395432415	3				NaN	NaN	0	NaN	2154	3228	5383
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5395	19.73	NaN	2209.1	30	0	189.43	0.142			+	31958	QQSPQPQE	8	60	471.219049499735	940.42354606627	2	471.221435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QQSPQPQE_	REV__ENSG00000236383|ENST00000636331|CCDC200	32.81241826257853	0.7059802730411993	3				NaN	NaN	0	NaN	2162	3231	5394
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5405	19.754	NaN	5596.1	30	0	1329	0.214			+	7498	DGKLVRELYLQ	11	68	445.25446066145656	NaN	0	445.2544250488281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DGKLVRELYLQ_	REV__ENSG00000138071|ENST00000260641|ACTR2;REV__nc|ENSG00000138071|P61160-2|ACTR2	48.601550744091256	0.32536291591840966	3				NaN	NaN	0	NaN	2169	3234	5404
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5406	19.757	NaN	858.6	30	0	276.76	0.034				-1	GMYQTMTK	8	30	488.218017578125	NaN	0	488.218017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_GMYQTM(Oxidation (M))TK_	ENSG00000149577|ENST00000324225|SIDT2;nc|ENSG00000149577|Q8NBJ9-2|SIDT2	29.14955571784316	1.7418937515398478	3				NaN	NaN	0	NaN	2170	3234	5404
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5415	19.777	NaN	9407.6	30	0	3332.2	0.214				-1	 	0	58	466.77258275929205	931.5306125853841	2	466.77447509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2176	3237	5414
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5416	19.781	NaN	1938.3	30	0	811.52	0.032				-1	 	0	32	392.23861185940996	782.4626707856199	2	392.2403259277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2177	3237	5414
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5428	19.806	NaN	5919.3	30	0	2868.7	0.214				-1	 	0	37	399.20994501299214	796.4053370927843	2	399.21136474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2186	3240	5427
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5429	19.81	NaN	2712.8	30	0	928.08	0.037	+			85	AACSQYFKK	9	38	368.18350611744717	NaN	0	368.1835632324219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_AAC(Carbamidomethyl (C))SQYFKK_	ENSG00000178951|ENST00000322357|ZBTB7A	47.657333605630114	0.2228375344433429	3				NaN	NaN	0	NaN	2187	3240	5427
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5443	19.839	NaN	961.73	30	0	141.85	0.214			+	28611	NKRVELNK	8	55	500.7973977347156	999.5802425362313	2	500.7993469238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NKRVELNK_	REV__ENSG00000185149|ENST00000329476|NPY2R	67.49366992349736	0.4277823096851425	3				NaN	NaN	0	NaN	2198	3243	5442
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5444	19.842	NaN	1703.3	30	0	206.3	0.106	+			15937	HAFESSQKY	9	61	548.7552169609254	1095.4958809886507	2	548.7587280273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HAFESSQKY_	ENSG00000100027|ENST00000339468|YPEL1;ENSG00000175155|ENST00000312655|YPEL2;ENST00000477675.1_1_22:22055420-22058252:-|nuORF;YPEL1|p.E102A|1|0.07|ENSG00000100027|chr22:21701184-21701184|T/G|missense_variant	127.46168284122857	0.016682644177004526	3				NaN	NaN	0	NaN	2199	3243	5442
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5445	19.844	NaN	908.33	30	0	191.55	0.035	+			3353	ASNFKSPVK	9	38	489.2743352284749	NaN	0	489.2741394042969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASNFKSPVK_	ENSG00000204435|ENST00000375882|CSNK2B	51.52775601994872	0.19616436856719055	3				NaN	NaN	0	NaN	2200	3243	5442
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5457	19.87	NaN	7383.4	30	0	1970.6	0.214	+			30732	QDLDTRTR	8	65	502.7597632555427	1003.5049735778854	2	502.7618408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QDLDTRTR_	ENSG00000160117|ENST00000404085|ANKLE1;ENST00000404085.5_1_19:17392508-17397358:+|nuORF;ENST00000596099.1_1_19:17392905-17393816:+|nuORF;nc|ENSG00000160117|Q8NAG6-1|ANKLE1	51.33545320467046	0.5859736979383976	3				NaN	NaN	0	NaN	2209	3246	5456
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5458	19.873	NaN	1143.4	30	0	639.51	0.106	+			24929	LKSSIIGKNK	10	26	363.23236083984375	NaN	0	363.23236083984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LKSSIIGKNK_	ARFGAP2|p.K216N|1|0.28|ENSG00000149182|chr11:47172305-47172305|C/A|missense_variant	14.137123925751023	0.4201028297492154	3				NaN	NaN	0	NaN	2210	3246	5456
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5459	19.875	NaN	1735.7	30	0	452.82	0.033				-1	 	0	44	435.23852168100944	868.4624904288189	2	435.2397155761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2211	3246	5456
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5472	19.902	NaN	16931	30	0	2559.2	0.213				-1	 	0	73	610.2713337906504	1827.792171972151	3	610.6077270507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2221	3249	5471
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5473	19.906	NaN	14056	30	0	6040.4	0.106	+			3053	ASFKMDPLI	9	46	341.1844027067627	1020.5313787204881	3	341.1855773925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASFKMDPLI_	ENSG00000010282|ENST00000441594|HHATL	34.172542307311794	0.4838870758800184	3				NaN	NaN	0	NaN	2222	3249	5471
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5474	19.908	NaN	1095.2	30	0	272.29	0.106			+	50491	YALPAPAGV	9	41	429.74139404296875	NaN	0	429.74139404296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YALPAPAGV_	REV__ENSG00000174607|ENST00000310836|UGT8	39.021493756699265	0.2805557132942146	3				NaN	NaN	0	NaN	2223	3249	5471
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5475	19.91	NaN	1799.4	30	0	536.24	0.033				-1	 	0	37	449.23569821539587	896.4568434975918	2	449.2373962402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2224	3249	5471
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5490	19.941	NaN	5880.4	30	0	1091.3	0.214			+	17489	IDANYTDY	8	56	487.7091942238582	973.4038355145165	2	487.7109680175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IDANYTDY_	REV__ENSG00000129038|ENST00000261921|LOXL1;REV__ENST00000562548.1_1_15:74240132-74244175:+|nuORF;REV__ENST00000566011.5_1_15:74234368-74244175:+|nuORF	65.80317337860623	0.44433089765398776	3				NaN	NaN	0	NaN	2236	3252	5489
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5491	19.945	NaN	460.7	30	0	63.278	0.033	+			19033	IYAGRGNL	8	33	432.2399051209445	NaN	0	432.239990234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IYAGRGNL_	tr|U7SQW6|U7SQW6_FUSNUThioredoxinreductase(NADPH)OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01607PE=4SV=1	35.200714571348534	1.7418937515398478	3				NaN	NaN	0	NaN	2237	3252	5489
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5505	19.974	NaN	11021	30	0	4442.2	0.214				-1	 	0	62	468.2537692036209	934.4929854740418	2	468.2555847167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2248	3255	5504
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5506	19.978	NaN	351.88	30	0	82.567	0.038	+			34617	RVPVEKPVYK	10	21	607.8660278320312	NaN	0	607.8660278320312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RVPVEKPVYK_	ENSG00000184428|ENST00000329245|TOP1MT;nc|ENSG00000184428|Q969P6-2|TOP1MT	23.37791116691581	0.4201028297492154	3				NaN	NaN	0	NaN	2249	3255	5504
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5518	20.003	NaN	1485.1	30	0	325.56	0.141	+			37452	SLILGTRE	8	42	444.7595269346791	887.5045009361583	2	444.7607116699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLILGTRE_	tr|U7SJI8|U7SJI8_FUSNUPenicillin-bindingprotein1COS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02062PE=4SV=1	53.351449002276354	0.5676011784961348	3				NaN	NaN	0	NaN	2258	3258	5517
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5551	20.084	NaN	1785.5	30	0	496.39	0.145			+	26064	LSLRAGQHR	9	31	346.53683095789444	1036.5886634738833	3	346.53802490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSLRAGQHR_	REV__ENST00000376962.9_1_9:74978504-74980043:-|nuORF;REV__ENST00000487330.1_1_9:74975472-74979818:-|nuORF	24.519189625965996	0.574102787014149	3				NaN	NaN	0	NaN	2282	3267	5550
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5566	20.118	NaN	2883.7	30	0	436.81	0.215				-1	 	0	56	451.7489886175162	901.4834243018324	2	451.75091552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2294	3270	5565
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5567	20.121	NaN	2217.1	30	0	236.47	0.106			+	-1	LEKEMDELERD	11	46	474.8841247558594	NaN	0	474.8841247558594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LEKEM(Oxidation (M))DELERD_	REV__CEP290|p.E1553Kfs*4|1|0.52|ENSG00000198707|chr12:88084634-88084634|T/-|frameshift_variant;REV__CEP290|p.E326Ifs*8|1|0.15|ENSG00000198707|chr12:88126402-88126405|ACTC/-|frameshift_variant;REV__CEP290|p.I2385*|1|0.37|ENSG00000198707|chr12:88050410-88050410|T/-|frameshift_variant;REV__CEP290|p.L2448Tfs*8|1|0.11|ENSG00000198707|chr12:88049282-88049283|-/T|frameshift_variant;REV__CEP290|p.M1079Cfs*9|1|0.24|ENSG00000198707|chr12:88093844-88093844|T/-|frameshift_variant;REV__CEP290|p.N212Tfs*14|4|0.21|ENSG00000198707|chr12:88130302-88130302|T/-|frameshift_variant;REV__CEP290|p.N882Ifs*10|1|0.2|ENSG00000198707|chr12:88106847-88106847|T/-|frameshift_variant;REV__CEP290|p.R2306Nfs*40|1|0.14|ENSG00000198707|chr12:88055616-88055619|TCTC/-|frameshift_variant;REV__ENSG00000198707|ENST00000552810|CEP290	34.08650109265054	0.41350691770670583	3				NaN	NaN	0	NaN	2295	3270	5565
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5568	20.123	NaN	1852.3	30	0	483.91	0.033	+			35431	SASASLPTK	9	34	431.2371770393745	NaN	0	431.2369079589844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SASASLPTK_	ENSG00000141568|ENST00000335255|FOXK2;ENST00000473637.6_1_17:80553997-80559372:+|nuORF;ENST00000529652.1_1_17:80558017-80559372:+|nuORF;ENST00000571989.1_1_17:80551586-80559372:+|nuORF	60.11826168202944	0.14881452885248947	3				NaN	NaN	0	NaN	2296	3270	5565
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5581	20.15	NaN	5100.3	30	0	647.67	0.215				-1	 	0	62	450.7831711046812	899.5517892761624	2	450.7846984863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2306	3273	5580
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5582	20.154	NaN	2601.8	30	0	689.11	0.106	+			34924	SAAGAAFTK	9	46	412.21767481703085	822.4207967008617	2	412.2190246582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAAGAAFTK_	ENSG00000258315|ENST00000439424|C17orf49;ENST00000549857.1_1_17:6918176-6918548:+|nuORF;nc|ENSG00000258315|Q8IXM2-2|BAP18;nc|ENSG00000258315|Q8IXM2-3|BAP18	101.25262130126117	0.03792372629710479	3				NaN	NaN	0	NaN	2307	3273	5580
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5583	20.156	NaN	1151.9	30	0	183.41	0.035			+	30970	QEQLQLDL	8	40	493.7594295730417	985.5043062128834	2	493.76092529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QEQLQLDL_	REV__ENSG00000166689|ENST00000531066|PLEKHA7	87.75429964447693	0.2842685068779738	3				NaN	NaN	0	NaN	2308	3273	5580
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5597	20.185	NaN	30750	30	0	3473.8	0.214			+	34736	RWLANEQM	8	93	363.84296124813613	1088.5070543446084	3	363.8443603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))RWLANEQM_	REV__ENST00000522160.1_1_8:106431454-106463811:+|nuORF	55.50420428727701	0.5462892107279674	3				NaN	NaN	0	NaN	2319	3276	5596
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5598	20.188	NaN	2251.2	30	0	489.24	0.106				-1	 	0	49	441.73613156456986	881.4577101959397	2	441.7377014160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2320	3276	5596
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5599	20.19	NaN	1109.4	30	0	206.85	0.106	+			22999	KVSEFVASK	9	42	497.78133473067396	993.548116528148	2	497.78277587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KVSEFVASK_	ABTB1|p.E252Sfs*102|1|0.29|ENSG00000114626|chr3:127677272-127677272|C/-|frameshift_variant;ABTB1|p.P318Qfs*36|2|0.4|ENSG00000114626|chr3:127677762-127677762|C/-|frameshift_variant;ENSG00000114626|ENST00000232744|ABTB1;nc|ENSG00000114626|Q969K4-2|ABTB1;nc|ENSG00000114626|Q969K4-3|ABTB1;nc|ENSG00000114626|Q969K4-4|ABTB1	38.753607047826485	0.4348790777924195	3				NaN	NaN	0	NaN	2321	3276	5596
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5600	20.192	NaN	857.65	30	0	106.31	0.035	+			3881	ATAQAVAPPR	10	34	491.2775573730469	NaN	0	491.2775573730469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATAQAVAPPR_	ENST00000609438.1_1_4:90171359-90228902:-|nuORF	54.722347961057174	0.27574710963839943	3				NaN	NaN	0	NaN	2322	3276	5596
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5626	20.258	NaN	8991.5	30	0	1947.2	0.214	+			3174	ASIRLSSRKR	10	65	391.91043775015856	1172.7094838506757	3	391.9121398925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASIRLSSRKR_	ENST00000607241.1_1_2:9696514-9696625:+|nuORF	31.634271133179894	0.6214930414500597	3				NaN	NaN	0	NaN	2339	3285	5625
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5627	20.262	NaN	1071.6	30	0	296.09	0.034	+			30144	PSAGSSSSCSS	11	44	478.6840720788204	955.3535912244408	2	478.6859130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PSAGSSSSCSS_	ENSG00000267909|ENST00000599174|CCDC177	19.1035232394073	0.7810393085260824	3				NaN	NaN	0	NaN	2340	3285	5625
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5638	20.287	NaN	3276.7	30	0	1248.9	0.214	+			5129	ATSSVSALK	9	49	432.245114241177	NaN	0	432.2452087402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSSVSALK_	ENSG00000177084|ENST00000320574|POLE;ENST00000539357.1_1_12:133257669-133263919:-|nuORF;POLE|p.A2030Pfs*18|1|0.14|ENSG00000177084|chr12:132632712-132632712|C/-|frameshift_variant;POLE|p.E396Sfs*16|1|0.1|ENSG00000177084|chr12:132675438-132675438|C/-|frameshift_variant;POLE|p.K1170Nfs*49|1|0.15|ENSG00000177084|chr12:132657208-132657208|T/-|frameshift_variant;POLE|p.K325Sfs*19|1|0.27|ENSG00000177084|chr12:132676142-132676142|G/-|frameshift_variant	85.16082228582465	0.053699699744190164	3				NaN	NaN	0	NaN	2348	3288	5637
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5639	20.291	NaN	528.4	30	0	50.628	0.106	+			42640	TAVGSSTRY	9	38	471.2380065917969	NaN	0	471.2380065917969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAVGSSTRY_	ENSG00000173120|ENST00000529006|KDM2A;ENST00000524657.1_1_11:67020024-67022523:+|nuORF;nc|ENSG00000173120|Q9Y2K7-2|KDM2A;nc|ENSG00000173120|Q9Y2K7-4|KDM2A;nc|ENSG00000173120|Q9Y2K7-5|KDM2A	29.170058357718403	0.3302935627494407	3				NaN	NaN	0	NaN	2349	3288	5637
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5640	20.293	NaN	1301.9	30	0	170.72	0.106	+			32791	RASTLAMTK	9	47	497.76986187193046	993.5251708106609	2	497.77215576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_RASTLAM(Oxidation (M))TK_	ENSG00000090615|ENST00000450791|GOLGA3;nc|ENSG00000090615|Q08378-2|GOLGA3;nc|ENSG00000090615|Q08378-4|GOLGA3	65.46538089061403	0.16805504838372562	3				NaN	NaN	0	NaN	2350	3288	5637
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5641	20.294	NaN	1240.3	30	0	134.14	0.034			+	28371	NELEGSYY	8	55	487.7091942238582	973.4038355145165	2	487.7113037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NELEGSYY_	REV__ENSG00000168026|ENST00000683103|TTC21A;REV__nc|ENSG00000168026|Q8NDW8-5|TTC21A;REV__nc|ENSG00000168026|Q8NDW8-6|TTC21A;REV__nc|ENSG00000168026|Q8NDW8-7|TTC21A	34.172542307311794	0.6954784234644539	3				NaN	NaN	0	NaN	2351	3288	5637
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5656	20.325	NaN	1074	30	0	337.28	0.144			+	-1	TNSRTMLLC	9	35	527.7549138858216	1053.495274838443	2	527.7577514648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_TNSRTM(Oxidation (M))LLC_	REV__BAG4|p.G456Rfs*70|1|0.53|ENSG00000156735|chr8:38210476-38210477|-/A|frameshift_variant;REV__ENST00000432471.6_2_8:38068046-38068208:+|nuORF	29.14955571784316	0.5308295550522326	3				NaN	NaN	0	NaN	2363	3291	5655
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5668	20.352	NaN	14151	30	0	2709.7	0.214				-1	 	0	74	497.7857674499094	993.5569819666188	2	497.7880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2372	3294	5667
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5669	20.356	NaN	2080.1	30	0	479.21	0.106				-1	 	0	41	428.74674519811043	855.4789374630209	2	428.74810791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2373	3294	5667
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5670	20.358	NaN	3068.4	30	0	476.47	0.106				-1	 	0	55	441.75432750245386	881.4941020717077	2	441.7557678222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2374	3294	5667
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5671	20.36	NaN	10278	30	0	4380	0.106	+			5715	AVFHLQEIAED	11	60	424.5465743077035	1270.6178935233106	3	424.5485534667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVFHLQEIAED_	ENSG00000196700|ENST00000369888|ZNF512B	36.31764250033197	0.6083289427130232	3				NaN	NaN	0	NaN	2375	3294	5667
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5672	20.362	NaN	929.83	30	0	219.21	0.106	+			14144	GSMRIFTKK	9	30	356.5395812988281	NaN	0	356.5395812988281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GSMRIFTKK_	ENSG00000168883|ENST00000323701|USP39;ENST00000459775.5_1_2:85848673-85875928:+|nuORF;ENST00000493829.5_1_2:85843459-85872221:+|nuORF;nc|ENSG00000168883|Q53GS9-2|USP39;nc|ENSG00000168883|Q53GS9-3|USP39	19.1035232394073	0.3723251548669699	3				NaN	NaN	0	NaN	2376	3294	5667
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5673	20.363	NaN	1121	30	0	413.16	0.106			+	22016	KSGPLAPDG	9	33	421.22439063328676	NaN	0	421.2245178222656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KSGPLAPDG_	REV__ENST00000460723.5_1_22:32015600-32017569:-|nuORF;REV__ENST00000474017.5_1_22:32017296-32017569:-|nuORF	56.72105179125745	0.16330365735109603	3				NaN	NaN	0	NaN	2377	3294	5667
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5674	20.365	NaN	362.25	30	0	119.38	0.035	+			29787	PILYLNGVV	9	22	494.29608154296875	NaN	0	494.29608154296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PILYLNGVV_	DLG5|p.F1661Ifs*9|1|0.12|ENSG00000151208|chr10:77805849-77805850|-/C|frameshift_variant;DLG5|p.P1167Rfs*16|1|0.62|ENSG00000151208|chr10:77819921-77819921|G/-|frameshift_variant;DLG5|p.P861Qfs*32|1|0.31|ENSG00000151208|chr10:77821902-77821902|G/-|frameshift_variant;ENSG00000151208|ENST00000372391|DLG5;nc|ENSG00000151208|Q8TDM6-2|DLG5;nc|ENSG00000151208|Q8TDM6-3|DLG5	14.664097394203935	0.38735045005659413	3				NaN	NaN	0	NaN	2378	3294	5667
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5689	20.396	NaN	1363.4	30	0	118.28	0.214	+			16364	HENDVKTAL	9	52	513.7621900807088	1025.5098272282175	2	513.7647705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HENDVKTAL_	ENSG00000165533|ENST00000380656|TTC8;nc|ENSG00000165533|Q8TAM2-3|TTC8;TTC8|p.K269Rfs*38|1|0.08|ENSG00000165533|chr14:88857236-88857237|-/GGATGAATAG|frameshift_variant	45.02220120713402	0.3613509778819777	3				NaN	NaN	0	NaN	2390	3297	5688
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5690	20.4	NaN	1713.4	30	0	242.6	0.033	+			35175	SAIGCHVVN	9	44	450.2265579448896	NaN	0	450.22662353515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAIGCHVVN_	ENSG00000102024|ENST00000355899|PLS3;ENSG00000136167|ENST00000323076|LCP1;nc|ENSG00000102024|P13797-2|PLS3;nc|ENSG00000102024|P13797-3|PLS3	68.78682469695295	0.1118430353446351	3				NaN	NaN	0	NaN	2391	3297	5688
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5707	20.435	NaN	6838.6	30	0	994.71	0.214			+	-1	WMHPFWWFEKC	11	54	565.9134058087528	1694.7183880264583	3	566.2499389648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))WMHPFWWFEKC(Carbamidomethyl (C))_	REV__NDST2|p.R380C|1|0.53|ENSG00000166507|chr10:73806767-73806767|G/A|missense_variant	1.3219263287936662	0.8913871202961154	3				NaN	NaN	0	NaN	2405	3300	5706
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5708	20.439	NaN	1444.8	30	0	326.92	0.106			+	11423	FLSRLAIGA	9	53	474.28863525390625	NaN	0	474.28863525390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FLSRLAIGA_	REV__ENSG00000114859|ENST00000265593|CLCN2;REV__nc|ENSG00000114859|P51788-3|CLCN2;REV__nc|ENSG00000114859|P51788-4|CLCN2;REV__nc|ENSG00000114859|P51788-5|CLCN2	60.97194046774394	0.14517358171632622	3				NaN	NaN	0	NaN	2406	3300	5706
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5709	20.441	NaN	1092.7	30	0	243.6	0.034			+	13636	GMLMRTAQ	8	39	462.2293463449779	NaN	0	462.2287292480469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_GMLM(Oxidation (M))RTAQ_	REV__sp|P16782|RIR1_HCMVARibonucleoside-diphosphatereductaselargesubunit-likeproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=RIR1PE=3SV=1	50.0245360154114	1.7418937515398478	3				NaN	NaN	0	NaN	2407	3300	5706
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5721	20.466	NaN	9918.4	30	0	1874.3	0.214				-1	 	0	67	449.7515514930211	897.4885500528422	2	449.7531433105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2416	3303	5720
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5722	20.47	NaN	1431.5	30	0	303.98	0.035	+			894	AEHLEKSSL	9	50	507.2648100541157	1012.5150671750314	2	507.2667541503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEHLEKSSL_	ENSG00000080345|ENST00000444746|RIF1;nc|ENSG00000080345|Q5UIP0-2|RIF1;RIF1|p.E1442Gfs*4|1|0.39|ENSG00000080345|chr2:151463835-151463836|-/A|frameshift_variant;RIF1|p.K1441Rfs*18|1|0.2|ENSG00000080345|chr2:151463836-151463836|A/-|frameshift_variant;RIF1|p.K1505Rfs*18|3|0.3|ENSG00000080345|chr2:151464027-151464027|A/-|frameshift_variant	56.43379154798735	0.2433427591689151	3				NaN	NaN	0	NaN	2417	3303	5720
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5735	20.497	NaN	961.87	30	0	277.53	0.14	+			49437	VVVGGGGVGK	10	31	414.750686185874	NaN	0	414.7506103515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVVGGGGVGK_	ENSG00000126458|ENST00000246792|RRAS;ENSG00000133818|ENST00000256196|RRAS2;nc|ENSG00000133818|P62070-4|RRAS2	45.9519527083369	0.331194823726099	3				NaN	NaN	0	NaN	2427	3306	5734
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5746	20.524	NaN	2174.8	30	0	281.94	0.143	+			22090	KSMAWRVL	8	58	495.7814026950284	989.5482524568569	2	495.7830505371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSMAWRVL_	DYNC1H1|p.F2635Lfs*67|1|0.16|ENSG00000197102|chr14:102017141-102017141|T/-|frameshift_variant;DYNC1H1|p.K3112Hfs*3|1|0.31|ENSG00000197102|chr14:102027998-102027999|-/TCACAAG|frameshift_variant;DYNC1H1|p.W4201Gfs*43|1|0.42|ENSG00000197102|chr14:102043958-102043958|G/-|frameshift_variant;ENSG00000197102|ENST00000360184|DYNC1H1	60.97194046774394	0.49215940876911696	3				NaN	NaN	0	NaN	2435	3309	5745
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5759	20.553	NaN	1159.9	30	0	318.89	0.214			+	17077	HRQASRGA	8	30	441.73613156456986	881.4577101959397	2	441.7376708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HRQASRGA_	REV__ENST00000566525.5_1_16:770887-771532:+|nuORF	27.882242232435846	0.7440473649773525	3				NaN	NaN	0	NaN	2445	3312	5758
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5760	20.556	NaN	3102.1	30	0	1085	0.106	+			44574	TTATGLLGQ	9	49	431.2363696662442	860.4581863992884	2	431.739990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTATGLLGQ_	ENSG00000159140|ENST00000356577|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-4|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-6|SON;nc|ENSG00000159140|P18583-7|SON;nc|ENSG00000159140|P18583-8|SON;nc|ENSG00000159140|P18583-9|SON	62.107414245175825	0.1960472003779324	3				NaN	NaN	0	NaN	2446	3312	5758
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5761	20.558	NaN	1290.9	30	0	171.61	0.036	+			27654	MPSHPDRAY	9	44	537.2439175832826	1072.4732822333651	2	537.246826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MPSHPDRAY_	ENSG00000161955|ENST00000338784|TNFSF13;nc|ENSG00000161955|O75888-2|TNFSF13;nc|ENSG00000161955|O75888-3|TNFSF13;nc|ENSG00000161955|O75888-4|TNFSF13;nc|ENSG00000161955|O75888-5|TNFSF13;nc|ENSG00000239697|O43508-2|TNFSF12	29.170058357718403	0.5306379469863586	3				NaN	NaN	0	NaN	2447	3312	5758
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5773	20.583	NaN	4632	30	0	441.73	0.213				-1	 	0	65	642.954900369839	1925.842871709717	3	643.2918090820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2456	3315	5772
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5774	20.587	NaN	2278.1	30	0	284.4	0.106			+	33606	RLQSGTRR	8	58	487.2859330888164	972.5573132444329	2	487.28753662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RLQSGTRR_	REV__ENST00000394236.7_1_3:93692655-93692814:-|nuORF	34.172542307311794	0.6954784234644539	3				NaN	NaN	0	NaN	2457	3315	5772
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5775	20.589	NaN	1773.2	30	0	382.99	0.034	+			19269	KAFKRSSL	8	49	468.7850348988396	NaN	0	468.7848815917969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KAFKRSSL_	ENSG00000197483|ENST00000598519|ZNF628;ENSG00000197483|ENST00000598519|ZNF628;ZNF628|p.Q661Sfs*63|1|0.35|ENSG00000197483|chr19:55483170-55483170|C/-|frameshift_variant;ZNF628|p.Q661Sfs*63|1|0.35|ENSG00000197483|chr19:55483170-55483170|C/-|frameshift_variant	34.172542307311794	1.7418937515398478	3				NaN	NaN	0	NaN	2458	3315	5772
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5791	20.622	NaN	14391	30	0	2364.8	0.214				-1	 	0	73	581.261453495709	1740.7625310873268	3	581.59765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2471	3318	5790
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5792	20.625	NaN	993.2	30	0	170.6	0.106	+			21098	KKQKNKSE	8	56	495.2912514915388	988.5679500498776	2	495.266845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KKQKNKSE_	EIF5B|p.K748Nfs*29|1|0.22|ENSG00000158417|chr2:99382889-99382889|A/-|frameshift_variant;EIF5B|p.Q1121Rfs*13|1|0.27|ENSG00000158417|chr2:99396867-99396868|AG/-|frameshift_variant;ENSG00000158417|ENST00000289371|EIF5B	45.9519527083369	0.6193794311207887	3				NaN	NaN	0	NaN	2472	3318	5790
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5793	20.627	NaN	1851.4	30	0	289.96	0.106				-1	 	0	44	366.72579046932384	NaN	0	366.7256164550781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2473	3318	5790
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5794	20.629	NaN	4719.4	30	0	2096.5	0.036	+			41081	SVINKVTEK	9	33	339.86824926556454	1016.5829183968937	3	339.86962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVINKVTEK_	ENSG00000124784|ENST00000379834|RIOK1;RIOK1|p.E533Rfs*20|1|0.19|ENSG00000124784|chr6:7414384-7414385|-/A|frameshift_variant	44.377184641726394	0.36891676396732553	3				NaN	NaN	0	NaN	2474	3318	5790
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5821	20.69	NaN	3638.4	30	0	1623.6	0.214	+			21917	KRTTDKLQ	8	48	495.2912514915388	988.5679500498776	2	495.2930908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KRTTDKLQ_	ENST00000462503.1_1_8:34180515-34180734:-|nuORF	56.72105179125745	0.5342425954139568	3				NaN	NaN	0	NaN	2495	3324	5820
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5822	20.693	NaN	2565	30	0	701.74	0.033				-1	TGVSFGCVA	9	49	449.2108884750324	896.4072240168648	2	449.2123718261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_TGVSFGC(Carbamidomethyl (C))VA_	ENSG00000145817|ENST00000274496|YIPF5;nc|ENSG00000145817|Q969M3-2|YIPF5;nc|ENSG00000145817|Q969M3-3|YIPF5	47.91560031466742	0.327412564698279	3				NaN	NaN	0	NaN	2496	3324	5820
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5834	20.719	NaN	2635	30	0	844.6	0.214			+	10190	ETCKFGVR	8	44	470.2427591398739	NaN	0	470.2427978515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ETCKFGVR_	REV__ENSG00000174718|ENST00000312561|RESF1	49.44154591367651	1.7418937515398478	3				NaN	NaN	0	NaN	2505	3327	5833
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5835	20.722	NaN	1774.7	30	0	389.63	0.106	+			35639	SCGTWLPN	8	39	439.1976168872265	876.380680841253	2	439.1991882324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SCGTWLPN_	AASDHPPT|p.S29N|1|0.37|ENSG00000149313|chr11:106077796-106077796|G/A|missense_variant	37.15910966729921	0.6739408393984688	3				NaN	NaN	0	NaN	2506	3327	5833
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5836	20.724	NaN	1273.8	30	0	242.16	0.106	+			90	AADCAHEL	8	42	443.6887865365834	885.3630201399668	2	443.6899719238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_AADC(Carbamidomethyl (C))AHEL_	ENSG00000157379|ENST00000288111|DHRS1;ENST00000558340.1_1_14:24760067-24761569:-|nuORF;ENST00000561137.5_1_14:24760413-24761527:-|nuORF;ENST00000561273.5_1_14:24760714-24761569:-|nuORF	63.30626980617807	0.4690498839812213	3				NaN	NaN	0	NaN	2507	3327	5833
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5837	20.726	NaN	1800.3	30	0	315.88	0.034			+	38342	SRLCNVVV	8	48	473.76397453582535	NaN	0	473.7640686035156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_SRLC(Carbamidomethyl (C))NVVV_	REV__AP4B1|p.C320Afs*21|1|0.35|ENSG00000134262|chr1:113900060-113900060|A/-|frameshift_variant;REV__ENSG00000134262|ENST00000369569|AP4B1;REV__ENST00000484201.5_1_1:114440516-114447658:-|nuORF	51.33545320467046	1.7418937515398478	3				NaN	NaN	0	NaN	2508	3327	5833
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5849	20.751	NaN	4504.7	30	0	1031.5	0.215				-1	 	0	52	450.262163240366	898.5097735475321	2	450.26361083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2517	3330	5848
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5850	20.755	NaN	6624.1	30	0	1352	0.036			+	9271	EHEYNTRF	8	67	548.2465606215687	1094.4785683099374	2	548.2492065429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EHEYNTRF_	REV__ENST00000414673.5_1_17:16734454-16736059:-|nuORF	45.9519527083369	0.6193794311207887	3				NaN	NaN	0	NaN	2518	3330	5848
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5864	20.784	NaN	1489.2	30	0	188.21	0.215	+			40683	SVASRRGTH	9	42	485.7643788156464	NaN	0	485.7643737792969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVASRRGTH_	ENSG00000119669|ENST00000238647|IRF2BPL;IRF2BPL|p.G244Vfs*101|1|0.32|ENSG00000119669|chr14:77027062-77027062|C/-|frameshift_variant;IRF2BPL|p.L713Sfs*54|1|0.54|ENSG00000119669|chr14:77025656-77025656|G/-|frameshift_variant	47.95952297671804	0.22075498469600283	3				NaN	NaN	0	NaN	2529	3333	5863
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5865	20.788	NaN	1929.7	30	0	352.86	0.034	+			35946	SEGPHHVAL	9	50	473.7391539358029	945.4637549384058	2	473.7412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEGPHHVAL_	ENSG00000198836|ENST00000361510|OPA1;ENST00000475899.1_1_3:193355061-193361921:+|nuORF;nc|ENSG00000198836|O60313-11|OPA1;nc|ENSG00000198836|O60313-13|OPA1;nc|ENSG00000198836|O60313-2|OPA1;nc|ENSG00000198836|O60313-9|OPA1;nc|ENSG00000198836|O60313|OPA1	55.50420428727701	0.2510918378945873	3				NaN	NaN	0	NaN	2530	3333	5863
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5876	20.812	NaN	4963.7	30	0	1276.7	0.214			+	-1	SLMLFVILK	9	51	360.55601275016835	1078.646208850705	3	360.5571594238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_SLM(Oxidation (M))LFVILK_	REV__ENST00000461724.5_1_3:101546878-101547004:+|nuORF	54.776311868738084	0.25715957988447635	3				NaN	NaN	0	NaN	2538	3336	5875
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5877	20.815	NaN	1730.3	30	0	127.46	0.106	+			2629	AQIKEHLLK	9	56	540.3307810491718	1078.6470091651436	2	540.3338623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AQIKEHLLK_	EIF2B5|p.L605Pfs*9|1|0.26|ENSG00000145191|chr3:184143504-184143505|-/C|frameshift_variant;ENSG00000145191|ENST00000648915|EIF2B5;ENST00000481054.5_1_3:183853173-183856676:+|nuORF;ENST00000491144.5_1_3:183853173-183855624:+|nuORF	122.93914200107957	0.019420478173996256	3				NaN	NaN	0	NaN	2539	3336	5875
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5878	20.817	NaN	1402.2	30	0	502.76	0.035	+			39310	STATATVSVGK	11	48	511.27852716869774	1020.5425014041955	2	511.28118896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STATATVSVGK_	ENSG00000261150|ENST00000615648|EPPK1;EPPK1|p.G2015Vfs*36|2|0.33|ENSG00000261150|chr8:143867210-143867210|C/-|frameshift_variant;EPPK1|p.Q829Rfs*8|1|0.05|ENSG00000261150|chr8:143870770-143870770|C/-|frameshift_variant;EPPK1|p.Y695Ifs*68|1|0.36|ENSG00000261150|chr8:143871171-143871172|-/T|frameshift_variant	65.69465075029274	0.27262252711350304	3				NaN	NaN	0	NaN	2540	3336	5875
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5896	20.862	NaN	1887.5	30	0	213.88	0.142			+	25470	LPRLLADQ	8	49	463.275086642872	924.535620352544	2	463.2772521972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LPRLLADQ_	REV__ENSG00000007402|ENST00000424201|CACNA2D2;REV__nc|ENSG00000007402|Q9NY47-3|CACNA2D2;REV__nc|ENSG00000007402|Q9NY47-4|CACNA2D2;REV__nc|ENSG00000007402|Q9NY47-5|CACNA2D2;REV__nc|ENSG00000007402|Q9NY47|CACNA2D2	56.72105179125745	0.5342425954139568	3				NaN	NaN	0	NaN	2552	3342	5895
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5923	20.923	NaN	18628	30	0	6300.7	0.214				-1	 	0	47	399.2336299577559	796.4527069823118	2	399.23504638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2573	3348	5922
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5924	20.926	NaN	9271.4	30	0	2772.9	0.106			+	21385	KMKPFPVK	8	59	487.79583458256644	973.5771162319329	2	487.7974853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KMKPFPVK_	REV__AHNAK|p.T5657P|1|0.15|ENSG00000124942|chr11:62517448-62517448|T/G|missense_variant	68.484700416344	0.4195245774506064	3				NaN	NaN	0	NaN	2574	3348	5922
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5925	20.928	NaN	9047.2	30	0	4722.3	0.106				-1	STCNTKLTLK	10	40	389.211323638057	1164.6121415143712	3	389.2128601074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_STC(Carbamidomethyl (C))NTKLTLK_	ENSG00000169756|ENST00000544547|LIMS1;ENSG00000256671|ENST00000632897|LIMS4;ENSG00000256977|ENST00000480744|LIMS3;nc|ENSG00000169756|P48059-3|LIMS1;nc|ENSG00000169756|P48059-4|LIMS1;nc|ENSG00000169756|P48059-5|LIMS1;nc|ENSG00000169756|P48059|LIMS1	27.047317107675042	0.6589519614906109	3				NaN	NaN	0	NaN	2575	3348	5922
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5926	20.93	NaN	426.77	30	0	44.409	0.035			+	31583	QLRTGTRR	8	32	494.2924499511719	NaN	0	494.2924499511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QLRTGTRR_	REV__ENSG00000182362|ENST00000397701|YBEY;REV__nc|ENSG00000182362|P58557-2|YBEY;REV__nc|ENSG00000182362|P58557-3|YBEY;REV__nc|ENSG00000182362|P58557-4|YBEY	32.81241826257853	1.7418937515398478	3				NaN	NaN	0	NaN	2576	3348	5922
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5942	20.963	NaN	1093	30	0	112.76	0.214	+			8018	DTNKKQINV	9	42	530.2936744041592	NaN	0	530.293701171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DTNKKQINV_	ENSG00000123384|ENST00000243077|LRP1;LRP1|p.R3469Gfs*24|2|0.38|ENSG00000123384|chr12:57201552-57201552|C/-|frameshift_variant	25.450171626174864	0.34907449758287085	3				NaN	NaN	0	NaN	2589	3351	5941
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5943	20.967	NaN	685.92	30	0	145.25	0.036	+			16161	HEAERTEVL	9	32	542.2757345097173	NaN	0	542.2755737304688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HEAERTEVL_	CNTROB|p.L713Cfs*27|1|0.4|ENSG00000170037|chr17:7947710-7947710|T/-|frameshift_variant;ENSG00000170037|ENST00000563694|CNTROB;ENST00000571632.5_1_17:7838298-7849136:+|nuORF;nc|ENSG00000170037|Q8N137-2|CNTROB;nc|ENSG00000170037|Q8N137-3|CNTROB;nc|ENSG00000170037|Q8N137-4|CNTROB;nc|ENSG00000170037|Q8N137-5|CNTROB	45.97224482568171	0.23445038899310136	3				NaN	NaN	0	NaN	2590	3351	5941
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5957	20.997	NaN	1023.2	30	0	143.74	0.214	+			22828	KVGEVIVTK	9	48	486.8076171875	NaN	0	486.8076171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVGEVIVTK_	ENSG00000144381|ENST00000388968|HSPD1;ENST00000388967.3_1_3:36809128-36809431:-|nuORF;ENST00000420325.1_1_13:38567761-38567950:-|nuORF;HSPD1|p.G441Vfs*14|1|0.04|ENSG00000144381|chr2:197488385-197488385|C/-|frameshift_variant	33.921630207806714	0.3063038642147651	3				NaN	NaN	0	NaN	2601	3354	5956
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5958	21	NaN	4801	30	0	552.15	0.106	+			36297	SERGRSRL	8	58	480.7698527259561	959.5251525187123	2	480.7715148925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SERGRSRL_	ENSG00000188158|ENST00000676302|NHS;nc|ENSG00000188158|Q6T4R5-2|NHS;nc|ENSG00000188158|Q6T4R5-3|NHS;nc|ENSG00000188158|Q6T4R5-4|NHS;NHS|p.P977Hfs*71|1|0.12|ENSG00000188158|chrX:17727096-17727096|C/-|frameshift_variant	60.97194046774394	0.49215940876911696	3				NaN	NaN	0	NaN	2602	3354	5956
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5959	21.002	NaN	3049.5	30	0	394.56	0.106				-1	 	0	48	471.77003262078284	941.5255123083657	2	471.7718811035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2603	3354	5956
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5960	21.004	NaN	4904.7	30	0	738.61	0.048				-1	 	0	63	618.6050286303757	NaN	0	618.6047973632812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2604	3354	5956
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5973	21.031	NaN	580.63	30	0	209.85	0.144	+			37842	SNKISQDSES	10	29	547.7505493164062	NaN	0	547.7505493164062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SNKISQDSES_	ENSG00000138658|ENST00000505019|ZGRF1;ENST00000264370.9_1_4:113529030-113554332:-|nuORF;ENST00000514770.5_1_4:113532004-113549797:-|nuORF;nc|ENSG00000138658|Q86YA3-3|ZGRF1;nc|ENSG00000138658|Q86YA3-4|ZGRF1;nc|ENSG00000138658|Q86YA3-5|ZGRF1;nc|ENSG00000138658|Q86YA3-6|ZGRF1;ZGRF1|p.E2096Rfs*4|1|0.33|ENSG00000138658|chr4:112539576-112539577|-/T|frameshift_variant;ZGRF1|p.H772Afs*13|1|0.34|ENSG00000138658|chr4:112617729-112617730|-/T|frameshift_variant;ZGRF1|p.I715Yfs*5|1|0.35|ENSG00000138658|chr4:112617899-112617900|-/A|frameshift_variant;ZGRF1|p.K771Sfs*52|1|0.1|ENSG00000138658|chr4:112617730-112617730|T/-|frameshift_variant;ZGRF1|p.L728Yfs*14|1|0.17|ENSG00000138658|chr4:112617859-112617859|A/-|frameshift_variant;ZGRF1|p.R2022Kfs*8|1|0.29|ENSG00000138658|chr4:112539970-112539971|-/T|frameshift_variant	14.137123925751023	0.4201028297492154	3				NaN	NaN	0	NaN	2614	3357	5972
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5987	21.063	NaN	4007.9	30	0	2498	0.214				-1	 	0	28	323.2003634871324	644.3861740410648	2	323.2018127441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2625	3360	5986
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5988	21.066	NaN	1142.7	30	0	117.19	0.035	+			35036	SADKTVRVY	9	42	519.780955748365	1037.54735856353	2	519.7825927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SADKTVRVY_	ENSG00000103994|ENST00000564754|ZNF106;nc|ENSG00000103994|Q9H2Y7-2|ZNF106;nc|ENSG00000103994|Q9H2Y7|ZNF106	41.42661286455405	0.403525789677298	3				NaN	NaN	0	NaN	2626	3360	5986
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6000	21.092	NaN	6381.6	30	0	3278.5	0.214				-1	NGNNRKLRVC	10	49	410.88741401881623	1229.6404126566488	3	411.2230529785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_NGNNRKLRVC(Carbamidomethyl (C))_	ENSG00000159921|ENST00000642385|GNE;nc|ENSG00000159921|Q9Y223-2|GNE;nc|ENSG00000159921|Q9Y223-4|GNE	21.68575002086885	0.7027366847906487	3				NaN	NaN	0	NaN	2635	3363	5999
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6001	21.095	NaN	3250.2	30	0	589.06	0.106			+	3719	ATAATRRR	8	59	451.7673563787967	901.5201598243934	2	451.7688293457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATAATRRR_	REV__ATRN|p.P984Lfs*34|1|0.23|ENSG00000088812|chr20:3584079-3584079|C/-|frameshift_variant;REV__ENSG00000088812|ENST00000262919|ATRN;REV__nc|ENSG00000088812|O75882-2|ATRN;REV__nc|ENSG00000088812|O75882-3|ATRN	44.116797842482775	0.6307669463330267	3				NaN	NaN	0	NaN	2636	3363	5999
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6002	21.097	NaN	750.12	30	0	234.93	0.034	+			2875	ASASASLPTK	10	35	466.7558578193795	NaN	0	466.7562255859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASASASLPTK_	ENSG00000141568|ENST00000335255|FOXK2;ENST00000473637.6_1_17:80553997-80559372:+|nuORF;ENST00000529652.1_1_17:80558017-80559372:+|nuORF;ENST00000571989.1_1_17:80551586-80559372:+|nuORF	36.31764250033197	0.3809266711384728	3				NaN	NaN	0	NaN	2637	3363	5999
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6013	21.122	NaN	5525.9	30	0	1603.9	0.214	+			37817	SMNANTITK	9	66	490.24658544924375	978.4786179652875	2	490.24737548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SMNANTITK_	ENSG00000175467|ENST00000312397|SART1	154.0112374973812	0.005934173778894772	3				NaN	NaN	0	NaN	2645	3366	6012
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6014	21.126	NaN	2343.4	30	0	642.7	0.034			+	33691	RPCLLESP	8	40	457.74297981177267	913.4714066903454	2	457.7453918457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RPCLLESP_	REV__ENSG00000274211|ENST00000612932|SOCS7;REV__nc|ENSG00000274211|O14512|SOCS7	47.91560031466742	0.6071945918984287	3				NaN	NaN	0	NaN	2646	3366	6012
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6027	21.153	NaN	26046	30	0	11076	0.214	+			558	ADFLLSSELAT	11	50	389.53623864402925	1165.5868865322877	3	389.5379943847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ADFLLSSELAT_	ENSG00000146476|ENST00000367294|ARMT1	34.08650109265054	0.6322515996262609	3				NaN	NaN	0	NaN	2656	3369	6026
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6028	21.157	NaN	2295.1	30	0	283.1	0.106	+			12738	GEKVVKTAL	9	54	472.7922983139124	NaN	0	472.792724609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEKVVKTAL_	ENSG00000133835|ENST00000510025|HSD17B4;ENST00000511186.5_1_5:118788168-118811542:+|nuORF;ENST00000515235.6_1_5:118788237-118827866:+|nuORF;HSD17B4|p.L703Ifs*15|1|0.06|ENSG00000133835|chr5:119536530-119536531|-/GAAAAATA|frameshift_variant;nc|ENSG00000133835|P51659-2|HSD17B4;nc|ENSG00000133835|P51659-3|HSD17B4	72.2432373244024	0.09796301979040985	3				NaN	NaN	0	NaN	2657	3369	6026
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6029	21.159	NaN	4389.9	30	0	2238.9	0.106			+	10569	EYFPPNGLYEP	11	45	663.3050549279282	1324.5955569226562	2	663.3080444335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EYFPPNGLYEP_	REV__nc|ENSG00000164076|Q8NCB2-2|CAMKV	33.921630207806714	0.6339809607503234	3				NaN	NaN	0	NaN	2658	3369	6026
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6030	21.16	NaN	5052.3	30	0	1304.7	0.039			+	4437	ATIKLDFVDKQ	11	49	426.57437216745353	1276.7012871025606	3	426.57659912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATIKLDFVDKQ_	REV__ENSG00000129003|ENST00000644861|VPS13C;REV__nc|ENSG00000129003|Q709C8-2|VPS13C;REV__nc|ENSG00000129003|Q709C8-3|VPS13C;REV__nc|ENSG00000129003|Q709C8-4|VPS13C;REV__VPS13C|p.E2463Nfs*18|1|0.25|ENSG00000129003|chr15:61920157-61920157|C/-|frameshift_variant;REV__VPS13C|p.N3163Sfs*6|1|0.05|ENSG00000129003|chr15:61882732-61882733|-/TTATCATCAC|frameshift_variant;REV__VPS13C|p.P3597Lfs*3|1|0.26|ENSG00000129003|chr15:61868732-61868732|G/-|frameshift_variant	50.033510581677724	0.4206539900604183	3				NaN	NaN	0	NaN	2659	3369	6026
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6056	21.219	NaN	2882	30	0	962.34	0.214			+	46818	VIAYPSNAAS	10	38	496.7562593231536	991.4979657131072	2	496.7575988769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VIAYPSNAAS_	REV__ENSG00000164330|ENST00000313708|EBF1;REV__ENST00000518836.5_1_5:158126121-158526593:-|nuORF;REV__ENST00000519739.5_1_5:158126121-158523319:-|nuORF;REV__ENST00000519890.5_1_5:158126121-158500600:-|nuORF;REV__ENST00000522192.5_1_5:158126121-158523561:-|nuORF;REV__nc|ENSG00000164330|Q9UH73-2|EBF1	58.78195531508484	0.37691818691852547	3				NaN	NaN	0	NaN	2679	3375	6055
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6057	21.222	NaN	6382.5	30	0	808.25	0.106	+			34052	RSMEAHNILSK	11	60	429.22767086129454	NaN	0	429.2277526855469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RSMEAHNILSK_	ENSG00000160075|ENST00000291386|SSU72;ENST00000378725.3_1_1:1480120-1509937:-|nuORF;nc|ENSG00000160075|Q9NP77-2|SSU72;SSU72|p.L82Ffs*8|1|0.34|ENSG00000160075|chr1:1544981-1544982|-/A|frameshift_variant	104.06999374311218	0.029287927913890992	3				NaN	NaN	0	NaN	2680	3375	6055
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6058	21.224	NaN	1960.4	30	0	906.68	0.106			+	6719	CAGWVLAGL	9	40	445.23474064450255	NaN	0	445.2344665527344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_CAGWVLAGL_	REV__ENSG00000129038|ENST00000261921|LOXL1	39.021493756699265	0.2805557132942146	3				NaN	NaN	0	NaN	2681	3375	6055
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6059	21.226	NaN	1308.3	30	0	225.8	0.106			+	48718	VTTSTTPP	8	41	402.2093473193654	802.4041417055308	2	402.2107238769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTTSTTPP_	REV__ENSG00000102145|ENST00000376670|GATA1;REV__nc|ENSG00000102145|P15976-3|GATA1	26.79610172149135	0.7524337208463756	3				NaN	NaN	0	NaN	2682	3375	6055
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6060	21.228	NaN	1056	30	0	432.37	0.038			+	-1	SVLWQDCLAV	10	21	397.5339050292969	NaN	0	397.5339050292969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_SVLWQDC(Carbamidomethyl (C))LAV_	REV__ENST00000504323.5_1_5:145524050-145524254:-|nuORF	17.468008924990375	0.4201028297492154	3				NaN	NaN	0	NaN	2683	3375	6055
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6071	21.251	NaN	3708.6	30	0	603.36	0.214			+	48308	VTEKSAKHI	9	52	506.7918552318415	1011.569157530483	2	507.2952575683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTEKSAKHI_	REV__ENSG00000176635|ENST00000336726|HORMAD2	74.25504064058377	0.12238981753128622	3				NaN	NaN	0	NaN	2691	3378	6070
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6072	21.255	NaN	1242.7	30	0	227.41	0.106	+			3302	ASLSPSVSK	9	36	438.2437323481174	874.4729117630349	2	438.2455749511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASLSPSVSK_	ENSG00000118689|ENST00000406360|FOXO3;ENST00000395675.4_1_17:18575090-18575600:-|nuORF;nc|ENSG00000118689|O43524-2|FOXO3	58.22992032128504	0.22837015374068087	3				NaN	NaN	0	NaN	2692	3378	6070
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6073	21.257	NaN	2536.8	30	0	596.1	0.036	+			45921	VAQRDPIIAK	10	47	555.8336290728569	1109.6527052125136	2	555.83642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VAQRDPIIAK_	ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC;PRKDC|p.K3681Nfs*6|1|0.32|ENSG00000253729|chr8:47785174-47785177|TTCT/-|frameshift_variant;PRKDC|p.M3670*|1|0.5|ENSG00000253729|chr8:47785212-47785212|T/-|frameshift_variant;PRKDC|p.M3846Cfs*12|1|0.13|ENSG00000253729|chr8:47779047-47779047|T/-|frameshift_variant;PRKDC|p.M4020Cfs*2|1|0.31|ENSG00000253729|chr8:47776968-47776968|T/-|frameshift_variant;PRKDC|p.N3605Kfs*3|1|0.22|ENSG00000253729|chr8:47788993-47788994|-/T|frameshift_variant;PRKDC|p.N4037Ifs*15|1|0.17|ENSG00000253729|chr8:47776916-47776916|T/-|frameshift_variant;PRKDC|p.S3402Ifs*16|1|0.04|ENSG00000253729|chr8:47799302-47799303|-/AAACCGTGAGTTAGAGGAGGTAA|frameshift_variant;PRKDC|p.S4099Qfs*6|1|0.25|ENSG00000253729|chr8:47774265-47774265|A/-|frameshift_variant;PRKDC|p.T3268Pfs*7|1|0.5|ENSG00000253729|chr8:47803426-47803426|T/-|frameshift_variant;PRKDC|p.W3401Cfs*4|1|0.01|ENSG00000253729|chr8:47799304-47799305|-/AATGAATA|frameshift_variant	43.650786325866115	0.5155049133366767	3				NaN	NaN	0	NaN	2693	3378	6070
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6084	21.28	NaN	1422.7	30	0	439.74	0.214	+			45320	TVSESGTATLK	11	31	547.2892147374157	1092.5638765416313	2	547.29150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVSESGTATLK_	ENSG00000188112|ENST00000341865|C6orf132;nc|nan|Q5T0Z8-2|C6orf132;nc|nan|Q5T0Z8-4|C6orf132	54.722347961057174	0.3705654281804646	3				NaN	NaN	0	NaN	2701	3381	6083
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6085	21.284	NaN	1359.5	30	0	218.02	0.035	+			16322	HEKASTPVL	9	42	491.27205639192505	NaN	0	491.272705078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HEKASTPVL_	ENSG00000196781|ENST00000376499|TLE1	32.81241826257853	0.3119040447479903	3				NaN	NaN	0	NaN	2702	3381	6083
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6099	21.314	NaN	3724.8	30	0	750.43	0.214	+			22988	KVSDINISK	9	51	502.29116369058755	1002.5677744479751	2	502.2934875488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVSDINISK_	ENSG00000138193|ENST00000371380|PLCE1;PLCE1|p.A1544Pfs*9|1|0.07|ENSG00000138193|chr10:94273681-94273681|A/-|frameshift_variant;PLCE1|p.E2087Gfs*37|1|0.1|ENSG00000138193|chr10:94316672-94316676|AGAAG/-|frameshift_variant;PLCE1|p.P70Dfs*7|1|0.06|ENSG00000138193|chr10:94031253-94031254|-/GA|frameshift_variant;PLCE1|p.P70Lfs*8|1|0.04|ENSG00000138193|chr10:94031254-94031255|-/TAACA|frameshift_variant	123.11161354013207	0.019316068184164998	3				NaN	NaN	0	NaN	2713	3384	6098
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6100	21.317	NaN	2598.6	30	0	747.05	0.033			+	28661	NLPKVVCL	8	53	443.26557884312587	884.5166047530518	2	443.2671813964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NLPKVVCL_	REV__DSC1|p.N542Kfs*28|1|0.32|ENSG00000134765|chr18:31139785-31139786|-/T|frameshift_variant;REV__DSC2|p.A800Lfs*56|1|0.25|ENSG00000134755|chr18:31069004-31069004|C/-|frameshift_variant;REV__ENSG00000134755|ENST00000280904|DSC2;REV__ENSG00000134765|ENST00000257198|DSC1;REV__nc|ENSG00000134755|Q02487-2|DSC2;REV__nc|ENSG00000134765|Q08554-2|DSC1	35.200714571348534	0.6875396545722289	3				NaN	NaN	0	NaN	2714	3384	6098
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6114	21.347	NaN	2471.9	30	0	599.2	0.214	+			5054	ATSGVVAVR	9	44	430.25334872964584	NaN	0	430.2532653808594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSGVVAVR_	ENSG00000074054|ENST00000696935|CLASP1;nc|ENSG00000074054|Q7Z460-2|CLASP1;nc|ENSG00000074054|Q7Z460-3|CLASP1;nc|ENSG00000074054|Q7Z460-4|CLASP1;nc|ENSG00000074054|Q7Z460-5|CLASP1;nc|ENSG00000074054|Q7Z460|CLASP1	62.107414245175825	0.1403307765918332	3				NaN	NaN	0	NaN	2725	3387	6113
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6115	21.351	NaN	2461.3	30	0	492.7	0.106	+			884	AEHIESRTL	9	51	528.2783557206993	NaN	0	528.2783813476562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEHIESRTL_	ENSG00000147872|ENST00000276914|PLIN2;PLIN2|p.V348*|1|0.15|ENSG00000147872|chr9:19116520-19116520|C/-|frameshift_variant	54.722347961057174	0.17414871455573902	3				NaN	NaN	0	NaN	2726	3387	6113
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6116	21.353	NaN	3090.5	30	0	481.63	0.037			+	37040	SIRLNRSVR	9	47	367.56015398472437	NaN	0	367.2257995605469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SIRLNRSVR_	REV__ENST00000396161.9_2_19:58133856-58133982:+|nuORF	26.69291269510374	0.34280015626154364	3				NaN	NaN	0	NaN	2727	3387	6113
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6132	21.385	NaN	714.95	30	0	98.864	0.142	+			43547	THIGADNLP	9	34	469.24072730955254	NaN	0	469.2418212890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_THIGADNLP_	ENSG00000166963|ENST00000300231|MAP1A;MAP1A|p.G2418Afs*36|1|0.26|ENSG00000166963|chr15:43528722-43528722|G/-|frameshift_variant;MAP1A|p.K1546Rfs*6|1|0.28|ENSG00000166963|chr15:43526107-43526107|A/-|frameshift_variant;MAP1A|p.L1905Pfs*9|1|0.27|ENSG00000166963|chr15:43527180-43527181|-/C|frameshift_variant;MAP1A|p.R2065Vfs*5|1|0.25|ENSG00000166963|chr15:43527660-43527660|C/-|frameshift_variant;MAP1A|p.S2460Ifs*4|1|0.32|ENSG00000166963|chr15:43528844-43528845|-/C|frameshift_variant;MAP1A|p.V1503Sfs*16|1|0.28|ENSG00000166963|chr15:43525975-43525975|A/-|frameshift_variant;nc|ENSG00000166963|P78559-2|MAP1A	27.882242232435846	0.3367954786602879	3				NaN	NaN	0	NaN	2740	3390	6131
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6145	21.414	NaN	17052	30	0	10621	0.214			+	7634	DKKSDKKGKK	10	58	387.9031227616431	1160.6875388851292	3	387.9047546386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DKKSDKKGKK_	REV__ENSG00000183035|ENST00000329312|CYLC1	40.05817265558897	0.5486090488315611	3				NaN	NaN	0	NaN	2750	3393	6144
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6146	21.418	NaN	1513.7	30	0	336.54	0.106	+			43313	TGAFIDQMA	9	44	477.22635690867736	NaN	0	477.22637939453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TGAFIDQMA_	tr|U7SM56|U7SM56_FUSNUCoA-substrate-specificenzymeactivaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02088PE=4SV=1	32.81241826257853	0.3119040447479903	3				NaN	NaN	0	NaN	2751	3393	6144
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6147	21.42	NaN	1068.2	30	0	122	0.106	+			8434	EAREEKVVY	9	40	561.7917289016043	1121.5689048700085	2	561.7944946289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EAREEKVVY_	ENSG00000253276|ENST00000523505|CCDC71L;nc|ENSG00000253276|Q8N9Z2-2|CCDC71L	39.252832667884924	0.4290233611298554	3				NaN	NaN	0	NaN	2752	3393	6144
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6148	21.422	NaN	2456.5	30	0	330.62	0.041			+	-1	EMNSHMMRLKN	11	48	474.8821638063576	1421.6246620192728	3	474.8851318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Oxidation (M)	_EMNSHM(Oxidation (M))M(Oxidation (M))RLKN_	REV__ENSG00000131504|ENST00000389054|DIAPH1;REV__nc|ENSG00000131504|O60610-2|DIAPH1;REV__nc|ENSG00000131504|O60610-3|DIAPH1	36.527901853580055	0.6054519527965578	3				NaN	NaN	0	NaN	2753	3393	6144
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6162	21.452	NaN	50357	30	0	12927	0.214	+			50283	WRSARHGLK	9	81	370.8813273999036	1109.622152799911	3	370.8825988769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WRSARHGLK_	ENST00000476266.5_1_19:40748442-40748610:-|nuORF;ENST00000578975.1_1_19:40748439-40748610:-|nuORF	52.936696900407355	0.27249468807391813	3				NaN	NaN	0	NaN	2764	3396	6161
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6163	21.455	NaN	8578.5	30	0	1360.7	0.036				-1	NIFPLISMT	9	65	526.2780063470851	1050.5414597609702	2	526.2803955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_NIFPLISM(Oxidation (M))T_	tr|U7SWP6|U7SWP6_FUSNUMembraneproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01126PE=4SV=1	45.9519527083369	0.35044536499095585	3				NaN	NaN	0	NaN	2765	3396	6161
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6177	21.485	NaN	5841.1	30	0	992.15	0.142	+			31015	QESVMQAR	8	71	474.73019340924503	947.4458338852901	2	474.73138427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QESVMQAR_	ENST00000396987.7_1_8:41478536-41478953:+|nuORF	120.62098272573253	0.23366758524054274	3				NaN	NaN	0	NaN	2776	3399	6176
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6189	21.512	NaN	1342.7	30	0	262.59	0.142	+			48665	VTSSVSTLK	9	36	461.2664907685119	NaN	0	461.2662658691406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTSSVSTLK_	ENSG00000186260|ENST00000571589|MRTFB;nc|ENSG00000186260|Q9ULH7-4|MRTFB;nc|ENSG00000186260|Q9ULH7|MRTFB	42.86426827375447	0.2558691296974908	3				NaN	NaN	0	NaN	2785	3402	6188
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6203	21.543	NaN	7042.9	30	0	2177.9	0.214				-1	 	0	60	472.2678464160466	942.5211398988932	2	472.2696533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2796	3405	6202
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6204	21.547	NaN	2429.3	30	0	374.22	0.106	+			49234	VVNKVPLTGK	10	59	527.8324131418133	1053.6502733504265	2	527.8358154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVNKVPLTGK_	ENSG00000151135|ENST00000280756|TMEM263	104.01359247289065	0.06577755598965461	3				NaN	NaN	0	NaN	2797	3405	6202
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6205	21.549	NaN	968.94	30	0	185.25	0.033	+			11492	FPASSGVSH	9	38	444.71264444066105	887.4107359481221	2	444.7145080566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FPASSGVSH_	ENSG00000160294|ENST00000291688|MCM3AP;MCM3AP|p.K492Efs*5|1|0.29|ENSG00000160294|chr21:46280545-46280546|-/C|frameshift_variant	35.61828744233558	0.47037581924408073	3				NaN	NaN	0	NaN	2798	3405	6202
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6214	21.57	NaN	5746.1	30	0	646.33	0.143			+	7974	DSTNLSRLK	9	57	517.2855422012243	1032.5565314692485	2	517.7896118164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DSTNLSRLK_	REV__ACSM1|p.K258N|1|0.28|ENSG00000166743|chr16:20669965-20669965|C/A|missense_variant	39.252832667884924	0.4290233611298554	3				NaN	NaN	0	NaN	2804	3408	6213
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6226	21.598	NaN	1679.6	30	0	313.7	0.214				-1	 	0	47	472.2678464160466	942.5211398988932	2	473.2723083496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2813	3411	6225
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6227	21.601	NaN	1185.4	30	0	309.82	0.033	+			38702	SSKLSEKS	8	36	433.2332694982616	864.4519860633233	2	433.2354431152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSKLSEKS_	ENSG00000152193|ENST00000282003|OBI1	44.116797842482775	0.6307669463330267	3				NaN	NaN	0	NaN	2814	3411	6225
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6243	21.634	NaN	33159	30	0	6358.9	0.153			+	-1	WMHPFWWFEKC	11	71	565.9134258991869	1694.7184482977605	3	565.9153442382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))WMHPFWWFEKC(Carbamidomethyl (C))_	REV__NDST2|p.R380C|1|0.53|ENSG00000166507|chr10:73806767-73806767|G/A|missense_variant	0.37141330420238305	0.902963125519592	3				NaN	NaN	0	NaN	2827	3414	6242
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6275	21.705	NaN	2788.1	30	0	461.27	0.143				-1	 	0	58	499.2677615279504	996.5209701227009	2	499.2695617675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2853	3420	6274
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6291	21.74	NaN	29093	30	0	3762.5	0.214			+	8271	EAHHVIKL	8	77	473.7766154915176	945.5386780498352	2	473.7783508300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EAHHVIKL_	REV__ENSG00000151388|ENST00000504830|ADAMTS12;REV__nc|ENSG00000151388|P58397-3|ADAMTS12	52.29916861842294	0.578018602984656	3				NaN	NaN	0	NaN	2866	3423	6290
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6292	21.744	NaN	60199	30	0	27345	0.106	+			43421	TGKLDFILME	10	52	389.54219325276904	1165.604750358507	3	389.54351806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TGKLDFILME_	OR2T29|p.G20E|1|0.07|ENSG00000203661|chr1:248559433-248559433|C/T|missense_variant	40.05817265558897	0.5486090488315611	3				NaN	NaN	0	NaN	2867	3423	6290
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6293	21.746	NaN	6028.3	30	0	628.26	0.106				-1	 	0	71	465.7643957055295	929.5142384778591	2	465.7664489746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2868	3423	6290
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6294	21.747	NaN	826.56	30	0	102.04	0.106				-1	 	0	36	589.5933652243584	1765.7582662732752	3	589.594482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2869	3423	6290
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6295	21.749	NaN	5000.9	30	0	843.87	0.106	+			27344	MIIFQDLI	8	64	504.7754114216091	1007.5362699100182	2	504.7770690917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_M(Oxidation (M))IIFQDLI_	nc|ENSG00000219491|Q9HAU6|TPT1P8	76.84663266511073	0.3498490246073164	3				NaN	NaN	0	NaN	2870	3423	6290
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6296	21.751	NaN	697.58	30	0	64.869	0.036	+			50894	YFVLTFLW	8	42	544.7957153320312	NaN	0	544.7957153320312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YFVLTFLW_	ENSG00000182170|ENST00000332314|MRGPRG	20.481830146152948	1.741893751539848	3				NaN	NaN	0	NaN	2871	3423	6290
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6307	21.776	NaN	1490.7	30	0	197.05	0.214				-1	QLCRPSLYL	9	37	383.87514176471007	NaN	0	383.5398864746094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_QLC(Carbamidomethyl (C))RPSLYL_	CHD6|p.I2312Sfs*13|1|0.15|ENSG00000124177|chr20:41415191-41415191|T/-|frameshift_variant;ENSG00000124177|ENST00000373233|CHD6	20.94693142431847	0.3660861156085067	3				NaN	NaN	0	NaN	2879	3426	6306
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6308	21.78	NaN	1427.6	30	0	235.74	0.106	+			16204	HECASINRI	9	46	550.2695278419748	NaN	0	550.26953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_HEC(Carbamidomethyl (C))ASINRI_	ENSG00000172531|ENST00000376745|PPP1CA;ENSG00000186298|ENST00000335007|PPP1CC;ENSG00000213639|ENST00000395366|PPP1CB;ENST00000526510.5_1_11:67166008-67168740:-|nuORF;ENST00000532446.5_1_11:67166008-67168991:-|nuORF;nc|ENSG00000172531|P62136-2|PPP1CA;nc|ENSG00000172531|P62136-3|PPP1CA;nc|ENSG00000186298|P36873-2|PPP1CC;PPP1CB|p.E217Rfs*3|1|0.29|ENSG00000213639|chr2:28788708-28788709|-/G|frameshift_variant	69.6276240434122	0.10825701912424071	3				NaN	NaN	0	NaN	2880	3426	6306
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6309	21.782	NaN	1937.4	30	0	495.24	0.106			+	2698	AQPYGPGK	8	39	409.2138833013211	816.4132136694423	2	409.2153625488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AQPYGPGK_	REV__ENSG00000107295|ENST00000380607|SH3GL2	55.50420428727701	0.5462892107279674	3				NaN	NaN	0	NaN	2881	3426	6306
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6310	21.784	NaN	3030.3	30	0	442.6	0.106	+			34011	RSIQVDGKTIK	11	52	415.5804159657166	1243.7194184973498	3	415.9165954589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RSIQVDGKTIK_	ENSG00000103769|ENST00000261890|RAB11A;ENSG00000185236|ENST00000328024|RAB11B;ENST00000598706.1_1_19:8455252-8465174:+|nuORF;nc|ENSG00000103769|P62491-2|RAB11A;nc|ENSG00000185236|Q15907-2|RAB11B	84.18827529504426	0.1225661884453432	3				NaN	NaN	0	NaN	2882	3426	6306
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6311	21.785	NaN	1058.5	30	0	146.53	0.038			+	8234	EAFANVFEKK	10	27	394.8792178332261	NaN	0	394.8789367675781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EAFANVFEKK_	REV__tr|U7SSY3|U7SSY3_FUSNUDNA-bindingproteinHU-betaOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01416PE=3SV=1	30.317721548370564	0.4006274431774794	3				NaN	NaN	0	NaN	2883	3426	6306
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6324	21.813	NaN	1525.5	30	0	709.86	0.141	+			37859	SNPGGRPAL	9	29	434.7340205909576	867.4534882487152	2	434.7359924316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SNPGGRPAL_	ENSG00000114554|ENST00000393409|PLXNA1;PLXNA1|p.Q1019Rfs*22|3|0.36|ENSG00000114554|chr3:127016548-127016548|C/-|frameshift_variant	32.81241826257853	0.4965981579233955	3				NaN	NaN	0	NaN	2893	3429	6323
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6342	21.851	NaN	4149.5	30	0	1628.9	0.144	+			4677	ATLSEARLK	9	31	330.1965994052083	987.567968815825	3	330.19781494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATLSEARLK_	ENSG00000153815|ENST00000537098|CMIP;nc|ENSG00000153815|Q8IY22-2|CMIP;nc|ENSG00000153815|Q8IY22-3|CMIP	31.529811441608018	0.5085848003137583	3				NaN	NaN	0	NaN	2908	3432	6341
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6357	21.885	NaN	8271.5	30	0	4184.5	0.214	+			16842	HPEEYTGPR	9	50	543.2535674260622	1084.4925819189243	2	543.2572021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HPEEYTGPR_	ENSG00000185615|ENST00000219406|PDIA2;ENST00000482665.1_1_16:334415-335240:+|nuORF;nc|ENSG00000185615|Q13087-2|PDIA2;PDIA2|p.G353Afs*25|1|0.32|ENSG00000185615|chr16:285638-285638|G/-|frameshift_variant;PDIA2|p.P383Lfs*93|1|0.14|ENSG00000185615|chr16:286377-286377|C/-|frameshift_variant	44.116797842482775	0.37197099687881774	3				NaN	NaN	0	NaN	2920	3435	6356
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6358	21.888	NaN	13519	30	0	6154.9	0.106				-1	LACQGRRSEGA	11	50	402.1995935614684	1203.5769512846052	3	402.2015075683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LAC(Carbamidomethyl (C))QGRRSEGA_	ENST00000170564.6_1_19:33572049-33584283:+|nuORF	31.634271133179894	0.6579734920221648	3				NaN	NaN	0	NaN	2921	3435	6356
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6359	21.89	NaN	4435.4	30	0	1338	0.106	+			51128	YNGLVAGLQ	9	53	467.7529083110514	933.4912636889028	2	467.7551574707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YNGLVAGLQ_	ENSG00000175564|ENST00000314032|UCP3;ENSG00000175567|ENST00000663595|UCP2;nc|ENSG00000175564|P55916-2|UCP3;nc|ENSG00000175564|P55916-3|UCP3	74.25504064058377	0.12238981753128622	3				NaN	NaN	0	NaN	2922	3435	6356
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6360	21.892	NaN	1912.9	30	0	559.6	0.106			+	26848	LVVNPNGK	8	37	420.749003270366	839.483453607532	2	420.7506408691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LVVNPNGK_	REV__ENSG00000196440|ENST00000423738|ARMCX4	42.47446043378293	0.6409579893742323	3				NaN	NaN	0	NaN	2923	3435	6356
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6361	21.894	NaN	9593.9	30	0	1349.1	0.045				-1	 	0	67	571.9167412070651	1712.7283942213953	3	571.9210205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2924	3435	6356
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6373	21.919	NaN	7273.1	30	0	1461.9	0.141				-1	 	0	47	443.25970197777485	884.5048510223497	2	443.26116943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2933	3438	6372
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6386	21.948	NaN	2124.3	30	0	397.5	0.143				-1	SLFFLAATM	9	50	508.7595688973843	1015.5045848615687	2	508.7618408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_SLFFLAATM(Oxidation (M))_	chr1:59514825-59554124|105|103.89|0.24|8.74|+|2|TE_info:THE1A,THE1A_dup91,ERVL-MaLR,LTR,donor,+,59514549,59514825|None,FGGY|4	33.51558372728122	0.4900267029546261	3				NaN	NaN	0	NaN	2943	3441	6385
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6410	22.005	NaN	3169.2	30	0	657.68	0.214				-1	 	0	55	450.75919328587315	899.5038336385463	2	450.7608642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2961	3447	6409
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6411	22.008	NaN	1271.6	30	0	245.45	0.039			+	19959	KEGIHIRKHK	10	40	415.9244298506287	NaN	0	415.8941955566406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEGIHIRKHK_	REV__ENSG00000196172|ENST00000402377|ZNF681;REV__nc|ENSG00000196172|Q96N22-2|ZNF681	26.063383197487333	0.4145965855542893	3				NaN	NaN	0	NaN	2962	3447	6409
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6425	22.038	NaN	11144	30	0	1409	0.214	+			22249	KTALQRLCM	9	76	560.8014660855099	1119.5883792378197	2	560.8045043945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_KTALQRLC(Carbamidomethyl (C))M_	ENSG00000007174|ENST00000262442|DNAH9;ENST00000581682.1_1_17:11787806-11828539:+|nuORF;nc|ENSG00000007174|Q9NYC9-2|DNAH9;nc|ENSG00000007174|Q9NYC9-3|DNAH9	55.50420428727701	0.2510918378945873	3				NaN	NaN	0	NaN	2973	3450	6424
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6426	22.042	NaN	1614	30	0	556.71	0.033				-1	 	0	42	423.25664532189154	844.4987377105831	2	423.25823974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2974	3450	6424
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6439	22.069	NaN	4160.6	30	0	1424.7	0.214	+			39784	STKSWLSQ	8	57	468.74241502097294	935.4702771087459	2	468.7439880371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STKSWLSQ_	ENSG00000141068|ENST00000644974|KSR1;nc|ENSG00000141068|Q8IVT5-2|KSR1;nc|ENSG00000141068|Q8IVT5-3|KSR1;nc|ENSG00000141068|Q8IVT5-4|KSR1;nc|ENSG00000141068|Q8IVT5|KSR1	67.49366992349736	0.4277823096851425	3				NaN	NaN	0	NaN	2984	3453	6438
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6440	22.072	NaN	659.74	30	0	263.83	0.035	+			30574	QANDDARTF	9	34	519.2361750769936	NaN	0	519.236328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QANDDARTF_	ENSG00000181029|ENST00000596148|TRAPPC5	35.15202426646627	0.3000918603816441	3				NaN	NaN	0	NaN	2985	3453	6438
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6453	22.1	NaN	3819.9	30	0	1135.6	0.142			+	25184	LMALGWVAG	9	44	459.24821423178935	916.4818755303787	2	459.250244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LMALGWVAG_	REV__ENSG00000171596|ENST00000305141|NMUR1	39.021493756699265	0.43173687394350213	3				NaN	NaN	0	NaN	2995	3456	6452
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6467	22.131	NaN	963.36	30	0	145.39	0.142			+	28935	NRLNHLGK	8	40	476.2757568359375	NaN	0	476.2757568359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NRLNHLGK_	REV__ENSG00000111602|ENST00000553532|TIMELESS;REV__nc|ENSG00000111602|Q9UNS1-2|TIMELESS	31.954861631926434	1.7418937515398478	3				NaN	NaN	0	NaN	3006	3459	6466
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6483	22.166	NaN	688.7	30	0	107.3	0.214			+	29664	PGNARRPAG	9	39	448.2469787597656	NaN	0	448.2469787597656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PGNARRPAG_	REV__ENSG00000162302|ENST00000334205|RPS6KA4;REV__nc|ENSG00000162302|O75676-2|RPS6KA4	42.47446043378293	0.25855550551448697	3				NaN	NaN	0	NaN	3019	3462	6482
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6484	22.17	NaN	937.72	30	0	241.93	0.036			+	1886	AIMAPVPVEQ	10	38	527.7837779699438	1053.5530030066875	2	527.7882080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AIMAPVPVEQ_	REV__ENSG00000078098|ENST00000188790|FAP;REV__ENST00000480838.1_1_2:163066458-163099837:-|nuORF	33.921630207806714	0.6028135429846169	3				NaN	NaN	0	NaN	3020	3462	6482
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6498	22.2	NaN	3052.9	30	0	694.92	0.141			+	13310	GKGGRRRD	8	57	451.2566071786744	900.4986614241488	2	451.2583312988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GKGGRRRD_	REV__ENST00000382159.7_1_19:2514614-2514812:-|nuORF	29.14955571784316	0.7342621283720113	3				NaN	NaN	0	NaN	3031	3465	6497
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6509	22.226	NaN	1947	30	0	413.43	0.214	+			1494	AFSKDESK	8	52	456.2268448707861	910.4391368083723	2	456.2286071777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AFSKDESK_	ENSG00000149294|ENST00000316851|NCAM1;nc|ENSG00000149294|P13591-1|NCAM1	47.91560031466742	0.6071945918984287	3				NaN	NaN	0	NaN	3039	3468	6508
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6510	22.23	NaN	4585.3	30	0	828.25	0.038			+	-1	QVWYPPESR	9	45	401.8661157676257	NaN	0	401.8657531738281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))QVWYPPESR_	REV__ENST00000268489.9_1_16:72994068-73081865:-|nuORF	35.15202426646627	0.3000918603816441	3				NaN	NaN	0	NaN	3040	3468	6508
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6524	22.26	NaN	1557	30	0	337.14	0.214				-1	 	0	37	445.25158304086625	888.4886131485325	2	445.75341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3051	3471	6523
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6525	22.263	NaN	3167	30	0	942.56	0.037			+	-1	EAKHKKVCP	9	41	366.2038139506418	1095.5896124521255	3	366.2049560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_EAKHKKVC(Carbamidomethyl (C))P_	REV__ENSG00000117174|ENST00000370574|ZNHIT6;REV__nc|ENSG00000117174|Q9NWK9-2|ZNHIT6	24.519189625965996	0.574102787014149	3				NaN	NaN	0	NaN	3052	3471	6523
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6538	22.29	NaN	1753.6	30	0	355.43	0.146			+	35054	SAERVRVQRS	10	29	396.55987548828125	NaN	0	396.55987548828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAERVRVQRS_	REV__ENST00000371222.3_1_1:59248947-59249013:-|nuORF	40.05817265558897	0.3684561582319974	3				NaN	NaN	0	NaN	3062	3474	6537
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6554	22.325	NaN	972.83	30	0	136.76	0.141			+	32034	QRQLGADD	8	41	451.7197196836412	901.4248864340824	2	451.7217102050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QRQLGADD_	REV__ENSG00000152818|ENST00000367545|UTRN;REV__nc|ENSG00000152818|P46939-2|UTRN;REV__UTRN|p.G3160*|1|0.03|ENSG00000152818|chr6:144821001-144821002|AG/-|frameshift_variant;REV__UTRN|p.K1847Ffs*66|1|0.07|ENSG00000152818|chr6:144516945-144516946|-/TTTAA|frameshift_variant;REV__UTRN|p.R3003Pfs*5|1|0.27|ENSG00000152818|chr6:144793915-144793916|-/C|frameshift_variant;REV__UTRN|p.T2422Hfs*35|1|0.47|ENSG00000152818|chr6:144557282-144557282|A/-|frameshift_variant	47.91560031466742	0.6071945918984287	3				NaN	NaN	0	NaN	3075	3477	6553
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6565	22.352	NaN	5327.9	30	0	891.29	0.214			+	12445	GECIKKVR	8	62	466.77250685648045	931.5304607797609	2	466.7745666503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GECIKKVR_	REV__ENSG00000033627|ENST00000343619|ATP6V0A1;REV__nc|ENSG00000033627|Q93050-1|ATP6V0A1;REV__nc|ENSG00000033627|Q93050-3|ATP6V0A1	79.45101966838831	0.3281480470254892	3				NaN	NaN	0	NaN	3083	3480	6564
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6566	22.355	NaN	5609.5	30	0	1218	0.106			+	21262	KLMLFDGRKK	10	59	417.9139899850509	1250.7201405553526	3	417.9156494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_KLM(Oxidation (M))LFDGRKK_	REV__SPATA31D1|p.W428L|1|0.36|ENSG00000214929|chr9:81991753-81991753|G/T|missense_variant	43.650786325866115	0.5155049133366767	3				NaN	NaN	0	NaN	3084	3480	6564
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6567	22.357	NaN	1030.4	30	0	120.03	0.106	+			49284	VVQEVVDGK	9	45	486.77184840569765	NaN	0	486.7715148925781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVQEVVDGK_	CON__P35900;ENSG00000171431|ENST00000167588|KRT20	59.93077597824379	0.14961415694175798	3				NaN	NaN	0	NaN	3085	3480	6564
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6568	22.359	NaN	4345.4	30	0	879.49	0.032				-1	 	0	43	393.2338747311141	784.4531965290282	2	393.23541259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3086	3480	6564
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6581	22.386	NaN	8932.5	30	0	2725.7	0.214	+			5104	ATSPDFDGK	9	64	469.21634405663855	936.4181351800771	2	469.2181091308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSPDFDGK_	ENSG00000184743|ENST00000398868|ATL3	74.25504064058377	0.12238981753128622	3				NaN	NaN	0	NaN	3096	3483	6580
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6582	22.39	NaN	6927.5	30	0	2574.1	0.106				-1	 	0	59	490.7961441601796	979.5777353871592	2	490.7979736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3097	3483	6580
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6583	22.392	NaN	3595.4	30	0	633.3	0.106	+			46070	VCLSSVARP	9	56	466.25618746709097	930.497822000982	2	466.2580871582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VCLSSVARP_	ENSG00000049769|ENST00000055335|PPP1R3F;nc|ENSG00000049769|Q6ZSY5-2|PPP1R3F	68.78682469695295	0.14603441672067394	3				NaN	NaN	0	NaN	3098	3483	6580
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6584	22.393	NaN	3981.7	30	0	2467.8	0.106	+			41146	SVIWTLTPEGK	11	39	410.894287109375	NaN	0	410.894287109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVIWTLTPEGK_	DIS3L2|p.I516Ffs*15|1|0.43|ENSG00000144535|chr2:232263321-232263321|C/-|frameshift_variant;DIS3L2|p.L768Pfs*56|1|0.27|ENSG00000144535|chr2:232334638-232334639|-/C|frameshift_variant;DIS3L2|p.P612Rfs*33|1|0.4|ENSG00000144535|chr2:232329903-232329903|C/-|frameshift_variant;ENSG00000144535|ENST00000325385|DIS3L2;ENST00000433430.5_1_2:233103253-233124568:+|nuORF;ENST00000445090.5_1_2:233028172-233195406:+|nuORF;nc|ENSG00000144535|Q8IYB7-2|DIS3L2;nc|ENSG00000144535|Q8IYB7-3|DIS3L2	24.231819034082204	0.456735970842152	3				NaN	NaN	0	NaN	3099	3483	6580
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6585	22.395	NaN	888.13	30	0	86.785	0.106			+	43449	TGLSVAAAAV	10	38	430.2480608977913	NaN	0	430.2479248046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TGLSVAAAAV_	REV__ENST00000418609.5_1_4:186508579-186508693:-|nuORF	68.78682469695295	0.16252363814257367	3				NaN	NaN	0	NaN	3100	3483	6580
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6586	22.397	NaN	627.53	30	0	208.38	0.106	+			18427	ISAWITKM	8	27	475.263671875	NaN	0	475.263671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ISAWITKM_	ENSG00000171714|ENST00000324559|ANO5	31.954861631926434	1.7418937515398478	3				NaN	NaN	0	NaN	3101	3483	6580
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6587	22.399	NaN	498.37	30	0	55.588	0.036			+	21199	KLDRGKVNK	9	31	529.3268432617188	NaN	0	529.3268432617188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KLDRGKVNK_	REV__ENST00000485889.1_1_3:37035756-37038145:+|nuORF	44.377184641726394	0.24544280798894275	3				NaN	NaN	0	NaN	3102	3483	6580
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6603	22.432	NaN	3329.4	30	0	325.55	0.214	+			44720	TTLKYPYKS	9	59	550.8044671148537	1099.5943812965072	2	550.8068237304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTLKYPYKS_	ENSG00000160293|ENST00000371850|VAV2;nc|ENSG00000160293|P52735-2|VAV2;nc|ENSG00000160293|P52735-3|VAV2;VAV2|p.D760N|1|0.53|ENSG00000160293|chr9:133770447-133770447|C/T|missense_variant	58.78195531508484	0.22376836668196862	3				NaN	NaN	0	NaN	3115	3486	6602
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6604	22.436	NaN	1446.1	30	0	256.36	0.106				-1	GVCAAALMKK	10	48	532.7844876511651	1063.5544223691302	2	532.7869873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_GVC(Carbamidomethyl (C))AAALM(Oxidation (M))KK_	ENSG00000005810|ENST00000544440|MYCBP2;MYCBP2|p.N3049*|1|0.11|ENSG00000005810|chr13:77097894-77097895|TT/-|frameshift_variant;MYCBP2|p.P4047Qfs*26|2|0.35|ENSG00000005810|chr13:77067782-77067782|G/-|frameshift_variant;MYCBP2|p.T4311Pfs*37|1|0.14|ENSG00000005810|chr13:77059619-77059619|G/-|frameshift_variant;MYCBP2|p.V3749*|1|0.12|ENSG00000005810|chr13:77081486-77081486|C/-|frameshift_variant;nc|ENSG00000005810|O75592-2|MYCBP2	53.351449002276354	0.42630798468005626	3				NaN	NaN	0	NaN	3116	3486	6602
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6605	22.438	NaN	1015.9	30	0	434.71	0.034			+	16875	HPGRQSRH	8	34	487.75632022222436	NaN	0	487.755859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HPGRQSRH_	REV__ENST00000331920.10_1_9:98231408-98238427:-|nuORF	31.954861631926434	1.7418937515398478	3				NaN	NaN	0	NaN	3117	3486	6602
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6635	22.504	NaN	3848.3	30	0	1767.9	0.145	+			556	ADFGVSVRTPV	11	37	383.20686544915316	1146.5987669476594	3	383.2085876464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ADFGVSVRTPV_	sp|F5HDQ6|DNBI_HCMVMMajorDNA-bindingproteinOS=Humancytomegalovirus(strainMerlin)OX=295027GN=DBPPE=3SV=1;sp|P17147|DNBI_HCMVAMajorDNA-bindingproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=DBPPE=1SV=1	33.03940026070387	0.6432348334061824	3				NaN	NaN	0	NaN	3141	3492	6634
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6648	22.533	NaN	68490	30	0	9893.2	0.214				-1	 	0	90	475.7543881824433	949.4942234316866	2	475.7559509277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3151	3495	6647
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6649	22.537	NaN	6089.8	30	0	2544.3	0.038			+	-1	KTRLPCKAIK	10	55	405.58554406068833	1213.734802782265	3	405.921142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_KTRLPC(Carbamidomethyl (C))KAIK_	REV__CCDC66|p.A265Sfs*9|1|0.15|ENSG00000180376|chr3:56567024-56567025|-/A|frameshift_variant;REV__CCDC66|p.K66Nfs*22|1|0.36|ENSG00000180376|chr3:56563775-56563775|A/-|frameshift_variant;REV__CCDC66|p.T207Nfs*2|2|0.31|ENSG00000180376|chr3:56566661-56566662|-/A|frameshift_variant;REV__CCDC66|p.V732*|1|0.25|ENSG00000180376|chr3:56617454-56617454|A/-|frameshift_variant;REV__ENSG00000180376|ENST00000394672|CCDC66;REV__ENST00000422788.5_1_3:56595403-56599181:+|nuORF;REV__ENST00000469966.1_1_3:56592935-56598176:+|nuORF;REV__ENST00000472582.5_1_3:56591255-56599181:+|nuORF;REV__nc|ENSG00000180376|A2RUB6-2|CCDC66;REV__nc|ENSG00000180376|A2RUB6-3|CCDC66;REV__nc|ENSG00000180376|A2RUB6-4|CCDC66	31.634271133179894	0.6214930414500597	3				NaN	NaN	0	NaN	3152	3495	6647
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6662	22.564	NaN	1697.6	30	0	491.38	0.145			+	5777	AVGPRARPRPA	11	29	383.2310154508099	1146.6712169526297	3	383.2324523925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVGPRARPRPA_	REV__ENSG00000213949|ENST00000282588|ITGA1;REV__ENST00000274311.2_1_5:52084187-52095747:+|nuORF;REV__ENST00000504086.1_1_5:52084187-52120187:+|nuORF;REV__ITGA1|p.F633Lfs*11|1|0.19|ENSG00000213949|chr5:52915500-52915500|T/-|frameshift_variant;REV__ITGA1|p.N687Kfs*19|1|0.18|ENSG00000213949|chr5:52918798-52918799|-/A|frameshift_variant	19.262678746197807	0.7802940895261122	3				NaN	NaN	0	NaN	3162	3498	6661
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6676	22.595	NaN	2196.5	30	0	289.29	0.141	+			13807	GQNIAVVGK	9	50	443.2597792970907	884.5050056609814	2	443.2611389160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GQNIAVVGK_	ENSG00000107036|ENST00000414202|RIC1;nc|ENSG00000107036|Q4ADV7-2|RIC1;RIC1|p.M978Ifs*8|1|0.04|ENSG00000107036|chr9:5765505-5765506|-/TTGGGAA|frameshift_variant;RIC1|p.M978Nfs*6|1|0.04|ENSG00000107036|chr9:5765503-5765504|-/A|frameshift_variant	104.74654710444128	0.034358562718640136	3				NaN	NaN	0	NaN	3173	3501	6675
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6691	22.628	NaN	5413.9	30	0	2665.8	0.214			+	-1	MLEQQRSRR	9	45	407.215515821023	1218.624718063269	3	407.2169494628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))LEQQRSRR_	REV__ENSG00000143776|ENST00000366766|CDC42BPA;REV__nc|ENSG00000143776|Q5VT25-3|CDC42BPA;REV__nc|ENSG00000143776|Q5VT25-4|CDC42BPA;REV__nc|ENSG00000143776|Q5VT25-5|CDC42BPA;REV__nc|ENSG00000143776|Q5VT25-6|CDC42BPA;REV__nc|ENSG00000143776|Q5VT25|CDC42BPA	34.172542307311794	0.4838870758800184	3				NaN	NaN	0	NaN	3185	3504	6690
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6692	22.632	NaN	887.23	30	0	182.01	0.035	+			31443	QKQQVEKM	8	40	509.77164696876434	NaN	0	509.77130126953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QKQQVEKM_	ENSG00000072786|ENST00000176763|STK10	31.529811441608018	1.7418937515398478	3				NaN	NaN	0	NaN	3186	3504	6690
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6705	22.659	NaN	1729.7	30	0	325.02	0.214	+			10767	FAGDDAPRA	9	44	460.21543599201095	918.4163190508219	2	460.21722412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FAGDDAPRA_	ACTA1|p.G22D|1|0.25|ENSG00000143632|chr1:229433051-229433051|C/T|missense_variant;ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196604|ENST00000409914|POTEF;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000473016.1_1_2:74120109-74129648:+|nuORF;ENST00000477812.1_1_7:5569027-5569288:-|nuORF;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000482085.1_1_10:90708534-90712518:-|nuORF;ENST00000488967.5_1_10:90706975-90712518:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;POTEE|p.N792Kfs*34|1|0.2|ENSG00000188219|chr2:131263828-131263829|-/A|frameshift_variant	79.71258880314673	0.09879134589249085	3				NaN	NaN	0	NaN	3196	3507	6704
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6706	22.663	NaN	2209.5	30	0	805.46	0.035	+			16909	HPLEGTHEL	9	52	516.7575565773345	1031.500560221469	2	516.7600708007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HPLEGTHEL_	ENSG00000122299|ENST00000355758|ZC3H7A;ENST00000571676.5_1_16:11858892-11864657:-|nuORF;ZC3H7A|p.I490Yfs*41|2|0.18|ENSG00000122299|chr16:11767471-11767471|T/-|frameshift_variant	38.80614096846853	0.43426287593479557	3				NaN	NaN	0	NaN	3197	3507	6704
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6720	22.692	NaN	2540.8	30	0	331.12	0.144	+			22818	KVFRGNKVK	9	45	359.23182166869077	NaN	0	358.89703369140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVFRGNKVK_	ENSG00000086205|ENST00000256999|FOLH1;ENST00000526226.1_1_11:49207215-49208312:-|nuORF;ENST00000529567.5_1_11:89372457-89431764:+|nuORF;FOLH1|p.K499Ifs*16|1|0.06|ENSG00000086205|chr11:49157988-49157989|-/GAAAA|frameshift_variant;FOLH1|p.N216Mfs*24|1|0.25|ENSG00000086205|chr11:49185848-49185848|T/-|frameshift_variant;FOLH1|p.S338Yfs*13|1|0.37|ENSG00000086205|chr11:49175866-49175867|AA/-|frameshift_variant;FOLH1|p.S501Kfs*20|1|0.27|ENSG00000086205|chr11:49157982-49157983|-/T|frameshift_variant;FOLH1|p.S501Vfs*12|1|0.15|ENSG00000086205|chr11:49157983-49157983|T/-|frameshift_variant;nc|ENSG00000086205|Q04609-3|FOLH1;nc|ENSG00000086205|Q04609-6|FOLH1;nc|ENSG00000086205|Q04609-7|FOLH1;nc|ENSG00000086205|Q04609-8|FOLH1;nc|ENSG00000086205|Q04609-9|FOLH1	35.15202426646627	0.3000918603816441	3				NaN	NaN	0	NaN	3208	3510	6719
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6731	22.719	NaN	2749.1	30	0	463.67	0.214				-1	 	0	58	462.2435193757871	922.4724858183743	2	462.2454528808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3216	3513	6730
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6732	22.723	NaN	2307.6	30	0	382.39	0.106	+			33094	RELDGRTL	8	46	480.26726627591705	NaN	0	480.267333984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RELDGRTL_	ENSG00000112081|ENST00000373715|SRSF3;nc|ENSG00000112081|P84103-2|SRSF3	49.44154591367651	1.7418937515398478	3				NaN	NaN	0	NaN	3217	3513	6730
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6733	22.725	NaN	585.99	30	0	61.954	0.034	+			16663	HIIATSKSL	9	38	485.28997802734375	NaN	0	485.28997802734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HIIATSKSL_	ENSG00000105856|ENST00000222574|HBP1;nc|ENSG00000105856|O60381-2|HBP1;nc|ENSG00000105856|O60381-3|HBP1	56.72105179125745	0.16330365735109603	3				NaN	NaN	0	NaN	3218	3513	6730
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6743	22.747	NaN	6340.4	30	0	709.05	0.142				-1	 	0	62	471.2542189641203	940.4938849950406	2	471.25592041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3225	3516	6742
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6752	22.77	NaN	5849.9	30	0	2363.7	0.142				-1	 	0	64	466.75393945471296	931.493325976226	2	466.7559814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3231	3519	6751
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6760	22.791	NaN	980.4	30	0	212.4	0.214	+			44087	TPTKTYGM	8	38	449.7198791503906	NaN	0	449.7198791503906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TPTKTYGM_	ENSG00000109814|ENST00000316423|UGDH;UGDH|p.M432Nfs*20|1|0.29|ENSG00000109814|chr4:39503954-39503955|-/T|frameshift_variant;UGDH|p.V371Yfs*6|1|0.34|ENSG00000109814|chr4:39505298-39505298|T/-|frameshift_variant	47.91560031466742	1.7418937515398478	3				NaN	NaN	0	NaN	3236	3522	6759
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6761	22.795	NaN	2595.1	30	0	907.17	0.106				-1	 	0	41	434.23062490814215	866.4466968830843	2	434.2320251464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3237	3522	6759
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6762	22.797	NaN	2228.9	30	0	368.12	0.034				-1	LSSVVPCR	8	54	459.2482726431549	916.4819923531098	2	459.25018310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LSSVVPC(Carbamidomethyl (C))R_	ENST00000574767.5_1_17:78518736-78518931:+|nuORF	53.351449002276354	0.5676011784961348	3				NaN	NaN	0	NaN	3238	3522	6759
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6771	22.817	NaN	3727.2	30	0	1036.6	0.142			+	37706	SLSRMPPK	8	60	458.2588086138265	914.503064294453	2	458.2604675292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLSRMPPK_	REV__CTNND2|p.D443Tfs*113|1|0.35|ENSG00000169862|chr5:11364741-11364741|C/-|frameshift_variant;REV__ENSG00000169862|ENST00000304623|CTNND2;REV__ENST00000507430.1_1_5:11364802-11385035:-|nuORF;REV__nc|ENSG00000169862|Q9UQB3-2|CTNND2	44.116797842482775	0.6307669463330267	3				NaN	NaN	0	NaN	3244	3525	6770
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6784	22.846	NaN	1296.1	30	0	487.65	0.144	+			15928	HADPRIQGY	9	34	528.7653350084545	NaN	0	528.765380859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HADPRIQGY_	ENSG00000066322|ENST00000372458|ELOVL1;ENST00000464204.5_1_1:43830107-43833598:-|nuORF;ENST00000470968.6_1_1:43829589-43833598:-|nuORF;ENST00000479439.5_1_1:43830699-43831981:-|nuORF;ENST00000496932.1_1_1:43830832-43833598:-|nuORF;nc|ENSG00000066322|Q9BW60-2|ELOVL1	26.69291269510374	0.34280015626154364	3				NaN	NaN	0	NaN	3254	3528	6783
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6810	22.906	NaN	9208	30	0	2291.2	0.214				-1	 	0	71	469.2513753175281	936.4881977018562	2	469.25311279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3274	3534	6809
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6811	22.91	NaN	1936.9	30	0	627.53	0.034	+			41949	SVVSSVTTK	9	38	454.2566133788325	906.4986738244651	2	454.25872802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVVSSVTTK_	ENSG00000135124|ENST00000337233|P2RX4;ENST00000499638.6_1_12:121647946-121660004:+|nuORF;nc|ENSG00000135124|Q99571-2|P2RX4;nc|ENSG00000135124|Q99571-3|P2RX4;P2RX4|p.T223Qfs*13|1|0.34|ENSG00000135124|chr12:121228783-121228783|A/-|frameshift_variant	47.657333605630114	0.33044192980041115	3				NaN	NaN	0	NaN	3275	3534	6809
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6822	22.935	NaN	4297.3	30	0	3104.5	0.214			+	5886	AVKQLKEVP	9	30	337.8781430863134	NaN	0	337.87811279296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVKQLKEVP_	REV__ENSG00000127603|ENST00000564288|MACF1;REV__ENST00000476350.1_1_1:39768622-39838291:+|nuORF;REV__MACF1|p.A5223Lfs*8|1|0.21|ENSG00000127603|chr1:39388486-39388486|G/-|frameshift_variant;REV__MACF1|p.N4824Kfs*19|1|0.33|ENSG00000127603|chr1:39387292-39387293|-/A|frameshift_variant;REV__MACF1|p.T4896Lfs*29|1|0.27|ENSG00000127603|chr1:39387507-39387507|A/-|frameshift_variant;REV__nc|ENSG00000127603|Q9UPN3-2|MACF1;REV__nc|ENSG00000127603|Q9UPN3-3|MACF1;REV__nc|ENSG00000127603|Q9UPN3-4|MACF1;REV__nc|ENSG00000127603|Q9UPN3-5|MACF1;REV__nc|ENSG00000127603|Q9UPN3|MACF1	39.252832667884924	0.27938773122138094	3				NaN	NaN	0	NaN	3283	3537	6821
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6823	22.938	NaN	2420.2	30	0	1047.5	0.106			+	23577	LALPLYQQKE	10	38	401.5626220703125	NaN	0	401.5626220703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LALPLYQQKE_	REV__ENSG00000121892|ENST00000303538|PDS5A;REV__nc|ENSG00000121892|Q29RF7-3|PDS5A	29.170058357718403	0.40439580130713204	3				NaN	NaN	0	NaN	3284	3537	6821
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6824	22.94	NaN	1118.7	30	0	256.92	0.035	+			41538	SVQCMPVAK	9	39	510.25291499866535	1018.4912770641307	2	510.2552795410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SVQC(Carbamidomethyl (C))MPVAK_	ENSG00000160877|ENST00000292431|NACC1	63.53385203322761	0.18415635464017938	3				NaN	NaN	0	NaN	3285	3537	6821
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6848	22.995	NaN	2588.4	30	0	590.78	0.214			+	37799	SMASAGNWAER	11	45	590.2637011876942	NaN	0	590.2639770507812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SMASAGNWAER_	REV__ENST00000487544.1_1_X:43703754-43741674:-|nuORF	28.081489160057373	0.4402687122534875	3				NaN	NaN	0	NaN	3303	3543	6847
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6849	22.999	NaN	1877.3	30	0	308.8	0.106	+			31425	QKMPKTLRT	9	53	551.8222734783644	1101.6299940235288	2	551.8253784179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QKMPKTLRT_	nc|ENSG00000288649|Q5JWF8|ACTL10	62.107414245175825	0.1960472003779324	3				NaN	NaN	0	NaN	3304	3543	6847
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6850	23.001	NaN	1171	30	0	104.21	0.033	+			35930	SEGIKHVL	8	44	441.75597954399774	NaN	0	441.7562561035156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEGIKHVL_	ENSG00000165475|ENST00000298248|CRYL1;nc|ENSG00000165475|Q9Y2S2-2|CRYL1	55.50420428727701	1.7418937515398478	3				NaN	NaN	0	NaN	3305	3543	6847
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6879	23.065	NaN	2377.3	30	0	304.32	0.14			+	12325	GDHVTAGF	8	50	402.18812030133125	NaN	0	402.1880187988281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GDHVTAGF_	REV__ENSG00000157119|ENST00000287777|KLHL40	26.79610172149135	1.7418937515398478	3				NaN	NaN	0	NaN	3328	3549	6878
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6890	23.091	NaN	1672.2	30	0	359.82	0.142			+	40285	STSRDRRV	8	33	488.76762444353056	975.5206959538611	2	488.768798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STSRDRRV_	REV__ENSG00000172572|ENST00000359062|PDE3A;REV__ENST00000544307.1_1_12:20725060-20833202:+|nuORF	30.503639358989545	0.7238069182250283	3				NaN	NaN	0	NaN	3336	3552	6889
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6902	23.119	NaN	3894.5	30	0	537.34	0.143	+			27404	MKRPSTEM	8	55	490.2401041865392	978.4656554398784	2	490.2424011230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MKRPSTEM_	ERICH3|p.T766Rfs*23|1|0.29|ENSG00000178965|chr1:74573414-74573414|T/-|frameshift_variant	79.9392285194092	0.32408006123154964	3				NaN	NaN	0	NaN	3345	3555	6901
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6914	23.146	NaN	9907.3	30	0	1888.8	0.214				-1	LNNLFLAMT	9	66	526.7754486677205	1051.536344402241	2	526.7791748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LNNLFLAM(Oxidation (M))T_	tr|U7SHZ2|U7SHZ2_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02205PE=4SV=1	38.80614096846853	0.43426287593479557	3				NaN	NaN	0	NaN	3354	3558	6913
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6915	23.15	NaN	17536	30	0	5375.2	0.037			+	44710	TTKQEPKRT	9	53	363.5401571427534	1087.5986420284603	3	363.541748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTKQEPKRT_	REV__sp|Q6SWC0|UL10_HCMVMUncharacterizedproteinUL10OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL10PE=3SV=1	44.377184641726394	0.36891676396732553	3				NaN	NaN	0	NaN	3355	3558	6913
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6927	23.175	NaN	5538.8	30	0	3518.8	0.214				-1	ALYFLLMAL	9	32	357.5365295255576	1069.5877591768729	3	357.5381774902344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ALYFLLM(Oxidation (M))AL_	ENSG00000163625|ENST00000295888|WDFY3;nc|ENSG00000163625|Q8IZQ1-2|WDFY3;WDFY3|p.L1842Yfs*10|1|0.19|ENSG00000163625|chr4:84755300-84755300|A/-|frameshift_variant	29.14955571784316	0.5308295550522326	3				NaN	NaN	0	NaN	3364	3561	6926
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6928	23.179	NaN	1461.5	30	0	244.6	0.106	+			12269	GAVRSVKET	9	49	473.7708883113	945.5272236894	2	473.772705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GAVRSVKET_	ENSG00000090432|ENST00000264198|MUL1	40.77816245573522	0.41113185337114944	3				NaN	NaN	0	NaN	3365	3561	6926
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6929	23.18	NaN	1742.2	30	0	702.14	0.106	+			51471	YVHDDGRVSY	10	48	605.7778340024558	NaN	0	605.77783203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YVHDDGRVSY_	ENSG00000130755|ENST00000597595|GMFG;ENST00000601731.1_1_19:39819119-39826633:-|nuORF	85.86182877749512	0.07061569993707435	3				NaN	NaN	0	NaN	3366	3561	6926
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6930	23.182	NaN	1170.8	30	0	196.94	0.036			+	-1	HAVTGPWMR	9	43	535.7635262706707	1069.5124996081413	2	535.7667846679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_HAVTGPWM(Oxidation (M))R_	REV__nc|ENSG00000104365|O14920-3|IKBKB	35.61828744233558	0.47037581924408073	3				NaN	NaN	0	NaN	3367	3561	6926
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6941	23.207	NaN	4109.4	30	0	1907.7	0.214				-1	 	0	44	427.24677248784826	852.4789920424965	2	427.24786376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3375	3564	6940
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6942	23.211	NaN	3015.1	30	0	830.75	0.106	+			9533	ELCLKTAR	8	56	467.2642001283716	932.5138473235432	2	467.2655944824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ELCLKTAR_	ENPP2|p.F471Sfs*19|1|0.34|ENSG00000136960|chr8:119584005-119584005|A/-|frameshift_variant;ENSG00000136960|ENST00000075322|ENPP2;nc|ENSG00000136960|Q13822-2|ENPP2;nc|ENSG00000136960|Q13822-3|ENPP2	51.33545320467046	0.5859736979383976	3				NaN	NaN	0	NaN	3376	3564	6940
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6943	23.213	NaN	1763.9	30	0	141.36	0.106	+			29945	PMRKAALR	8	53	471.78964050113626	NaN	0	471.7896423339844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PMRKAALR_	ENSG00000115524|ENST00000335508|SF3B1;SF3B1|p.F815Lfs*19|1|0.14|ENSG00000115524|chr2:197401451-197401451|A/-|frameshift_variant	19.359975847455235	1.7418937515398478	3				NaN	NaN	0	NaN	3377	3564	6940
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6944	23.215	NaN	2028.3	30	0	333.41	0.037	+			36837	SIFEPAKGGEK	11	58	581.8073792704193	1161.6002056076386	2	581.8090209960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SIFEPAKGGEK_	ENSG00000160710|ENST00000368474|ADAR;nc|ENSG00000160710|P55265-2|ADAR;nc|ENSG00000160710|P55265-3|ADAR;nc|ENSG00000160710|P55265-4|ADAR;nc|ENSG00000160710|P55265-5|ADAR	73.90049950687481	0.20322248490973555	3				NaN	NaN	0	NaN	3378	3564	6940
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6959	23.245	NaN	18675	30	0	5403.6	0.147			+	36606	SGEARKSLKRK	11	73	420.58914576404607	1258.7456078923383	3	420.5906066894531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SGEARKSLKRK_	REV__BRINP3|p.E623*|1|0.15|ENSG00000162670|chr1:190098452-190098453|-/A|frameshift_variant;REV__BRINP3|p.W279Cfs*28|1|0.27|ENSG00000162670|chr1:190226206-190226206|C/-|frameshift_variant;REV__ENSG00000162670|ENST00000367462|BRINP3;REV__nc|ENSG00000162670|Q76B58-2|BRINP3	54.343338949951054	0.37394860514808087	3				NaN	NaN	0	NaN	3390	3567	6958
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6971	23.273	NaN	15721	30	0	8002.6	0.214				-1	 	0	41	398.2201786084692	794.4258042837384	2	398.2218017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3399	3570	6970
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6972	23.276	NaN	1189.5	30	0	343.52	0.106	+			40554	SVADPGQLK	9	31	457.75073463592497	NaN	0	457.7508850097656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVADPGQLK_	ENSG00000142765|ENST00000616558|SYTL1;ENST00000483926.5_1_1:27668800-27676624:+|nuORF;nc|ENSG00000142765|Q8IYJ3-2|SYTL1	34.172542307311794	0.30503706118289736	3				NaN	NaN	0	NaN	3400	3570	6970
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6973	23.278	NaN	316.99	30	0	101.08	0.031	+			30285	PTILISFYL	9	17	356.2111511230469	NaN	0	356.2111511230469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PTILISFYL_	tr|U7T2K1|U7T2K1_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00479PE=4SV=1	18.324413293986947	0.3749620627292244	3				NaN	NaN	0	NaN	3401	3570	6970
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6998	23.335	NaN	5495.4	30	0	859.78	0.214				-1	 	0	74	503.8044053332394	1005.5942577332788	2	503.80596923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3420	3576	6997
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6999	23.338	NaN	731.64	30	0	147.67	0.106			+	-1	KIIGATMLQ	9	33	495.78626802620175	NaN	0	495.7864074707031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_KIIGATM(Oxidation (M))LQ_	REV__DNAH6|p.L3633*|2|0.38|ENSG00000115423|chr2:84784749-84784749|T/-|frameshift_variant;REV__DNAH6|p.M132Cfs*61|2|0.12|ENSG00000115423|chr2:84525727-84525727|A/-|frameshift_variant;REV__DNAH6|p.N304Ifs*16|1|0.2|ENSG00000115423|chr2:84544475-84544475|A/-|frameshift_variant;REV__DNAH6|p.R2682Kfs*27|1|0.42|ENSG00000115423|chr2:84701316-84701317|-/A|frameshift_variant;REV__DNAH6|p.S114Vfs*16|1|0.06|ENSG00000115423|chr2:84525672-84525672|A/-|frameshift_variant;REV__DNAH6|p.S3773Lfs*5|1|0.09|ENSG00000115423|chr2:84796377-84796377|T/-|frameshift_variant;REV__ENSG00000115423|ENST00000389394|DNAH6;REV__ENST00000468661.1_1_2:84744950-84771368:+|nuORF;REV__ENST00000476689.5_1_2:84744950-84775489:+|nuORF;REV__nc|ENSG00000115423|Q9C0G6-4|DNAH6	45.97224482568171	0.23445038899310136	3				NaN	NaN	0	NaN	3421	3576	6997
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7000	23.34	NaN	1332.6	30	0	212.14	0.106	+			30600	QAQHGRRP	8	43	475.2561581352013	948.4977633372026	2	475.2587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QAQHGRRP_	ENSG00000166398|ENST00000299505|GARRE1	26.79610172149135	0.7524337208463756	3				NaN	NaN	0	NaN	3422	3576	6997
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7001	23.342	NaN	1602.8	30	0	131.4	0.033	+			43193	TEVGKLIK	8	43	444.2801700271806	886.5457871211612	2	444.28131103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TEVGKLIK_	ENSG00000165092|ENST00000297785|ALDH1A1	45.9519527083369	0.6193794311207887	3				NaN	NaN	0	NaN	3423	3576	6997
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7012	23.367	NaN	3600.7	30	0	1111.6	0.143	+			3673	ASYTKIVVK	9	41	336.8734519075361	1007.5985263228083	3	336.87445068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASYTKIVVK_	ENSG00000141252|ENST00000437048|VPS53;ENST00000541903.6_1_17:422370-426182:-|nuORF	40.05817265558897	0.419577045485086	3				NaN	NaN	0	NaN	3431	3579	7011
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7035	23.421	NaN	2504.9	30	0	1572	0.214	+			23165	KVYRIVPE	8	51	502.3005444272264	1002.5865359212528	2	502.3023681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVYRIVPE_	ENSG00000137265|ENST00000380956|IRF4;ENSG00000140968|ENST00000268638|IRF8;ENST00000495137.5_1_6:394829-397293:+|nuORF;nc|ENSG00000137265|Q15306-2|IRF4	35.61828744233558	0.6843154725607303	3				NaN	NaN	0	NaN	3448	3585	7034
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7036	23.425	NaN	3429.8	30	0	532.93	0.106				-1	 	0	59	595.596740466399	1783.7683919993967	3	596.2667236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3449	3585	7034
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7037	23.427	NaN	647.56	30	0	74.446	0.035	+			16119	HDVNLGRAV	9	39	490.7669856456871	NaN	0	490.7673034667969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HDVNLGRAV_	ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1670Tfs*23|1|0.29|ENSG00000174231|chr17:1659487-1659487|C/-|frameshift_variant	49.44154591367651	0.21054156626303966	3				NaN	NaN	0	NaN	3450	3585	7034
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7049	23.452	NaN	2217.4	30	0	449.89	0.214				-1	 	0	42	413.2436948456724	824.4728367581448	2	413.24542236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3459	3588	7048
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7050	23.456	NaN	706.84	30	0	98.068	0.034	+			3148	ASIDATYAK	9	38	470.24307972823357	NaN	0	470.2430725097656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASIDATYAK_	ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3	40.05817265558897	0.275207446262312	3				NaN	NaN	0	NaN	3460	3588	7048
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7063	23.483	NaN	20296	30	0	5816.1	0.214				-1	 	0	60	495.770168464584	989.525783995968	2	495.77239990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3470	3591	7062
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7064	23.486	NaN	2812.4	30	0	413.39	0.106				-1	 	0	51	452.2408800800867	902.4672072269734	2	453.24725341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3471	3591	7062
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7065	23.488	NaN	2708.5	30	0	503.6	0.035				-1	 	0	58	500.2751038701803	998.5356548071607	2	500.2776184082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3472	3591	7062
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7077	23.514	NaN	4798.4	30	0	556.11	0.214			+	30160	PSEMRLCR	8	68	504.2414257699997	1006.4682986067994	2	504.24310302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_PSEM(Oxidation (M))RLCR_	REV__ENST00000449943.5_1_11:64895819-64896227:-|nuORF	60.29395666154354	0.49887135096048313	3				NaN	NaN	0	NaN	3481	3594	7076
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7078	23.517	NaN	7090.4	30	0	2481.9	0.035				-1	 	0	63	488.78538555606156	975.5562181789231	2	488.78729248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3482	3594	7076
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7099	23.566	NaN	10435	30	0	2654.6	0.141				-1	 	0	62	452.2408800800867	902.4672072269734	2	452.2425231933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3497	3600	7098
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7110	23.592	NaN	5380.6	30	0	1218.4	0.146			+	18647	ISTSGDMLFVL	11	48	394.87335020730944	1181.5982212221284	3	394.874755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ISTSGDMLFVL_	REV__ENSG00000206384|ENST00000358511|COL6A6;REV__nc|ENSG00000206384|A6NMZ7-2|COL6A6	36.31764250033197	0.6083289427130232	3				NaN	NaN	0	NaN	3505	3603	7109
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7117	23.61	NaN	7031	30	0	2167.9	0.214			+	49315	VVRNKESSQ	9	62	523.782684669495	1045.5508164057899	2	523.7858276367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVRNKESSQ_	REV__ENSG00000186509|ENST00000335397|OR9Q1	37.81151784470057	0.4459294069877048	3				NaN	NaN	0	NaN	3509	3606	7116
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7118	23.613	NaN	2677.5	30	0	704.49	0.034	+			42442	TALRDVPF	8	53	459.75525166717824	917.4959504011565	2	459.75726318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TALRDVPF_	ENSG00000013306|ENST00000377095|SLC25A39;ENST00000588315.5_1_17:42398345-42398600:-|nuORF;ENST00000591006.5_1_17:42397371-42398600:-|nuORF;ENST00000592372.5_1_17:42397681-42398498:-|nuORF;nc|ENSG00000013306|Q9BZJ4-2|SLC25A39	55.50420428727701	0.5462892107279674	3				NaN	NaN	0	NaN	3510	3606	7116
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7142	23.668	NaN	4472.1	30	0	720.92	0.143	+			23615	LAPLSWLCS	9	66	516.2652169254766	1030.515880917753	2	516.2669677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LAPLSWLCS_	ENST00000264638.8_1_17:40851006-40851270:+|nuORF	45.9519527083369	0.35044536499095585	3				NaN	NaN	0	NaN	3528	3612	7141
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7156	23.699	NaN	2534.2	30	0	453.21	0.214				-1	KEEKKAMLQ	9	62	560.8073513178666	1119.6001497025331	2	560.8095092773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_KEEKKAM(Oxidation (M))LQ_	ENSG00000136715|ENST00000643581|SAP130;nc|ENSG00000136715|Q9H0E3-2|SAP130;nc|ENSG00000136715|Q9H0E3-3|SAP130;nc|ENSG00000136715|Q9H0E3|SAP130	77.31757898189308	0.1091473830098891	3				NaN	NaN	0	NaN	3539	3615	7155
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7157	23.703	NaN	2803	30	0	380.35	0.035	+			40465	STVSADPVVK	10	63	501.77545670458744	1001.5363604759749	2	501.7765808105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STVSADPVVK_	ENSG00000136051|ENST00000332180|WASHC4	88.17693792209575	0.14151128060301246	3				NaN	NaN	0	NaN	3540	3615	7155
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7171	23.732	NaN	4469.2	30	0	1428.3	0.214				-1	 	0	50	394.72784452443733	787.4411361156747	2	394.72943115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3551	3618	7170
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7172	23.736	NaN	1859.3	30	0	641.02	0.034	+			30965	QEQAAKAVL	9	46	479.27209539431414	NaN	0	479.272216796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QEQAAKAVL_	ENSG00000130119|ENST00000360845|GNL3L	64.20726635412375	0.13137488984569443	3				NaN	NaN	0	NaN	3552	3618	7170
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7187	23.767	NaN	10861	30	0	1901.1	0.142				-1	 	0	80	486.81198444488695	971.6094159565739	2	486.8136901855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3564	3621	7186
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7198	23.794	NaN	1745.6	30	0	308.15	0.214	+			5273	ATVETTIAR	9	49	481.26922607421875	NaN	0	481.26922607421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATVETTIAR_	ENSG00000064042|ENST00000503057|LIMCH1;LIMCH1|p.K805Rfs*20|1|0.37|ENSG00000064042|chr4:41680049-41680049|A/-|frameshift_variant;LIMCH1|p.T960Pfs*48|1|0.18|ENSG00000064042|chr4:41685768-41685768|A/-|frameshift_variant;nc|ENSG00000064042|Q9UPQ0-10|LIMCH1;nc|ENSG00000064042|Q9UPQ0-2|LIMCH1;nc|ENSG00000064042|Q9UPQ0-3|LIMCH1;nc|ENSG00000064042|Q9UPQ0-4|LIMCH1;nc|ENSG00000064042|Q9UPQ0-5|LIMCH1;nc|ENSG00000064042|Q9UPQ0-6|LIMCH1;nc|ENSG00000064042|Q9UPQ0-8|LIMCH1;nc|ENSG00000064042|Q9UPQ0-9|LIMCH1;nc|ENSG00000064042|Q9UPQ0|LIMCH1	33.921630207806714	0.3063038642147651	3				NaN	NaN	0	NaN	3572	3624	7197
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7199	23.798	NaN	5253.3	30	0	923.71	0.106			+	9948	ERAQVSHSQ	9	59	521.256947957378	1040.4993429815559	2	521.2587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ERAQVSHSQ_	REV__RBM10|p.G153S|1|0.21|ENSG00000182872|chrX:47173152-47173152|G/A|missense_variant	62.107414245175825	0.1960472003779324	3				NaN	NaN	0	NaN	3573	3624	7197
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7200	23.8	NaN	1109.8	30	0	281.25	0.032	+			36769	SIAAAVAPK	9	40	414.25266070071643	NaN	0	414.25286865234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SIAAAVAPK_	ENSG00000065328|ENST00000378714|MCM10;MCM10|p.K480R|1|0.2|ENSG00000065328|chr10:13191319-13191319|A/G|missense_variant;MCM10|p.N701Tfs*35|2|0.27|ENSG00000065328|chr10:13197741-13197741|A/-|frameshift_variant;MCM10|p.R719Gfs*17|1|0.35|ENSG00000065328|chr10:13198715-13198715|A/-|frameshift_variant;nc|ENSG00000065328|Q7L590|MCM10	58.78195531508484	0.1545138866451181	3				NaN	NaN	0	NaN	3574	3624	7197
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7213	23.826	NaN	1868	30	0	414.19	0.141	+			39159	SSVSLSLKG	9	43	439.251843929505	876.48913492581	2	439.2530822753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSVSLSLKG_	ENSG00000137270|ENST00000259803|GCM1	37.15910966729921	0.4535818937225704	3				NaN	NaN	0	NaN	3584	3627	7212
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7244	23.905	NaN	1571.4	30	0	492.11	0.143	+			14015	GSFKQLTVK	9	49	504.29847051901965	NaN	0	504.298095703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSFKQLTVK_	ENSG00000167283|ENST00000300688|ATP5MG;ENSG00000249222|ENST00000505920|ATP5MGL;ENST00000527186.1_1_11:118277587-118279810:+|nuORF;ENST00000534385.1_1_11:118272380-118277824:+|nuORF	59.93077597824379	0.14961415694175798	3				NaN	NaN	0	NaN	3606	3636	7243
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7256	23.932	NaN	6972.7	30	0	2302.3	0.214	+			45217	TVNTSLVGK	9	53	459.7649239655755	917.5152949979511	2	459.765869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVNTSLVGK_	CCDC66|p.A265Sfs*9|1|0.15|ENSG00000180376|chr3:56567024-56567025|-/A|frameshift_variant;CCDC66|p.T207Nfs*2|2|0.31|ENSG00000180376|chr3:56566661-56566662|-/A|frameshift_variant;CCDC66|p.V732*|1|0.25|ENSG00000180376|chr3:56617454-56617454|A/-|frameshift_variant;ENSG00000180376|ENST00000394672|CCDC66;ENST00000422788.5_1_3:56595403-56599181:+|nuORF;ENST00000469966.1_1_3:56592935-56598176:+|nuORF;ENST00000472582.5_1_3:56591255-56599181:+|nuORF;nc|ENSG00000180376|A2RUB6-2|CCDC66;nc|ENSG00000180376|A2RUB6-3|CCDC66;nc|ENSG00000180376|A2RUB6-4|CCDC66	79.48907831485694	0.09975780661107167	3				NaN	NaN	0	NaN	3615	3639	7255
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7257	23.936	NaN	8319.9	30	0	1860	0.035	+			23061	KVTKDKSNK	9	70	524.3111636042474	1046.6077742752948	2	524.3139038085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVTKDKSNK_	nc|ENSG00000288460|A0A5F9ZH02|SMIM42	98.62937762414208	0.04060045538121712	3				NaN	NaN	0	NaN	3616	3639	7255
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7267	23.958	NaN	1708	30	0	351.29	0.214	+			43164	TETHVERVL	9	40	542.2908673939238	1082.5671818546475	2	542.2930297851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TETHVERVL_	ENSG00000076201|ENST00000265562|PTPN23;PTPN23|p.L1513Wfs*71|1|0.44|ENSG00000076201|chr3:47412805-47412805|G/-|frameshift_variant	41.42661286455405	0.403525789677298	3				NaN	NaN	0	NaN	3623	3642	7266
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7268	23.961	NaN	2030.7	30	0	419.19	0.034	+			14391	GTAKTGSGKT	10	51	454.24581448023235	906.4770760272647	2	454.24749755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTAKTGSGKT_	DDX42|p.I296T|1|0.09|ENSG00000198231|chr17:63807764-63807764|T/C|missense_variant	49.536043120802724	0.461275219792494	3				NaN	NaN	0	NaN	3624	3642	7266
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7281	23.989	NaN	2600.5	30	0	345.22	0.214			+	34999	SAATLRTK	8	54	424.25370912418686	846.4928653151737	2	424.2554016113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAATLRTK_	REV__ENST00000448264.1_1_1:225888537-225888804:+|nuORF	68.78682469695295	0.41700713582915416	3				NaN	NaN	0	NaN	3634	3645	7280
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7282	23.992	NaN	1073.3	30	0	245.39	0.037				-1	 	0	46	564.8327668766078	1127.6509808200155	2	564.8347778320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3635	3645	7280
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7307	24.051	NaN	14547	30	0	4844.8	0.215	+			47181	VLVCSLRQ	8	67	459.2683592597363	NaN	0	459.2680969238281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VLVCSLRQ_	ENST00000531703.5_1_1:155023817-155026603:+|nuORF	54.776311868738084	1.7418937515398478	3				NaN	NaN	0	NaN	3654	3651	7306
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7308	24.054	NaN	1450.2	30	0	595.99	0.106	+			48884	VVDEKISAMGK	11	30	392.8810729980469	NaN	0	392.8810729980469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVDEKISAMGK_	ENSG00000167515|ENST00000696289|TRAPPC2L;ENST00000561840.1_2_16:88923580-88926055:+|nuORF;ENST00000564547.1_1_16:88923507-88925305:+|nuORF;ENST00000565309.1_1_16:88925068-88926212:+|nuORF;nc|ENSG00000167515|Q9UL33|TRAPPC2L	48.601550744091256	0.32536291591840966	3				NaN	NaN	0	NaN	3655	3651	7306
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7309	24.056	NaN	564.21	30	0	114.91	0.035	+			33527	RKWREAGM	8	34	517.2717895507812	NaN	0	517.2717895507812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RKWREAGM_	ENSG00000145293|ENST00000273920|ENOPH1	40.5726180659479	1.7418937515398478	3				NaN	NaN	0	NaN	3656	3651	7306
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7324	24.087	NaN	3464.9	30	0	1007	0.214			+	48768	VTWGTGAGAE	10	50	474.7245514796473	947.4345500260946	2	474.72589111328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTWGTGAGAE_	REV__ENSG00000198804|ENST00000361624|MT-CO1	56.72105179125745	0.3956618550748046	3				NaN	NaN	0	NaN	3668	3654	7323
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7325	24.091	NaN	919.41	30	0	193.94	0.036			+	32885	RDKYEDGKP	9	42	554.2756839881673	1106.5368150431345	2	554.2778930664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RDKYEDGKP_	REV__ENSG00000122012|ENST00000502798|SV2C;REV__SV2C|p.D213Kfs*9|1|0.43|ENSG00000122012|chr5:76194973-76194976|CAGA/-|frameshift_variant	40.77816245573522	0.41113185337114944	3				NaN	NaN	0	NaN	3669	3654	7323
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7338	24.118	NaN	6077.3	30	0	2991.3	0.146	+			48852	VVCEYIVKK	9	46	379.88151146343716	1136.6227049905115	3	379.8824462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_VVC(Carbamidomethyl (C))EYIVKK_	EIF2S3|p.I441Nfs*4|1|0.29|ENSG00000130741|chrX:24073223-24073224|-/A|frameshift_variant;ENSG00000130741|ENST00000253039|EIF2S3;ENSG00000180574|ENST00000538173|EIF2S3B;nc|ENSG00000180574|Q2VIR3-2|EIF2S3B	45.97224482568171	0.3502073465782774	3				NaN	NaN	0	NaN	3679	3657	7337
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7352	24.149	NaN	1729.7	30	0	178.69	0.143	+			1728	AHFSSKDKL	9	53	516.775508333488	1031.536463733776	2	516.7774658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AHFSSKDKL_	ENSG00000164308|ENST00000437043|ERAP2;ENST00000513084.5_1_5:96245508-96253306:+|nuORF;nc|ENSG00000164308|Q6P179-3|ERAP2	38.80614096846853	0.43426287593479557	3				NaN	NaN	0	NaN	3690	3660	7351
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7366	24.18	NaN	2082.5	30	0	839.67	0.214			+	44357	TSIITWSAG	9	38	468.244876126227	934.475199319254	2	468.2470397949219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSIITWSAG_	REV__ENSG00000168214|ENST00000355476|RBPJ;REV__ENST00000514380.5_1_4:26322378-26431729:+|nuORF;REV__nc|ENSG00000168214|Q06330-2|RBPJ;REV__nc|ENSG00000168214|Q06330-3|RBPJ;REV__nc|ENSG00000168214|Q06330-4|RBPJ;REV__nc|ENSG00000168214|Q06330-5|RBPJ;REV__nc|ENSG00000168214|Q06330-6|RBPJ;REV__nc|ENSG00000168214|Q06330|RBPJ	30.503639358989545	0.5181749237905803	3				NaN	NaN	0	NaN	3701	3663	7365
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7367	24.183	NaN	1207	30	0	186.23	0.035	+			20217	KELIDHQL	8	45	498.2803388064001	NaN	0	498.28094482421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KELIDHQL_	ENST00000493152.6_1_13:48510839-48517485:-|nuORF	47.95952297671804	1.7418937515398478	3				NaN	NaN	0	NaN	3702	3663	7365
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7380	24.211	NaN	998.77	30	0	90.4	0.214			+	26788	LVSAERTEL	9	53	509.2810459101052	1016.5475388870104	2	509.2831115722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LVSAERTEL_	REV__ENST00000489816.5_1_5:892252-892519:-|nuORF	51.33545320467046	0.2872990594074956	3				NaN	NaN	0	NaN	3712	3666	7379
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7381	24.214	NaN	1251.4	30	0	481.26	0.033	+			49452	VVVTADLR	8	40	436.76406874312875	NaN	0	436.7640075683594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVVTADLR_	ETFB|p.A179V|1|0.15|ENSG00000105379|chr19:51346961-51346961|G/A|missense_variant	30.503639358989545	1.7418937515398478	3				NaN	NaN	0	NaN	3713	3666	7379
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7397	24.248	NaN	1130.4	30	0	250.71	0.144	+			39185	SSYREAVFK	9	40	543.7810543025529	1085.5475556719057	2	543.7838745117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSYREAVFK_	ENSG00000138629|ENST00000395081|UBL7	35.15202426646627	0.4747332964206883	3				NaN	NaN	0	NaN	3726	3669	7396
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7424	24.31	NaN	5405.2	30	0	461.06	0.214	+			16341	HEKTSRTS	8	69	473.2411365267237	944.4677201202475	2	473.2433166503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HEKTSRTS_	ENST00000589187.5_1_6:86387693-86388418:-|nuORF	55.50420428727701	0.5462892107279674	3				NaN	NaN	0	NaN	3747	3675	7423
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7425	24.313	NaN	6445.3	30	0	758.89	0.106	+			25083	LLMEATPL	8	58	444.24950111840514	886.4844493036103	2	444.2508544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LLMEATPL_	ENST00000265069.12_1_5:32417878-32420038:-|nuORF	52.29916861842294	0.578018602984656	3				NaN	NaN	0	NaN	3748	3675	7423
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7426	24.315	NaN	3140.9	30	0	1377.6	0.039	+			50870	YFDFEEILAF	10	39	431.8728088248296	1292.5965970746888	3	431.87420654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YFDFEEILAF_	ENSG00000119403|ENST00000373896|PHF19;ENST00000487555.5_1_9:123623373-123629236:-|nuORF	30.317721548370564	0.6322445173429027	3				NaN	NaN	0	NaN	3749	3675	7423
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7438	24.341	NaN	15281	30	0	9703.6	0.214	+			24408	LGAGVAGV	8	43	322.1924686669658	642.3703844007316	2	322.19378662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LGAGVAGV_	ENSG00000136643|ENST00000366960|RPS6KC1;nc|ENSG00000136643|Q96S38-2|RPS6KC1;RPS6KC1|p.F1056Lfs*9|1|0.05|ENSG00000136643|chr1:213272596-213272596|T/-|frameshift_variant	16.704963439144045	0.7946246187734944	3				NaN	NaN	0	NaN	3758	3678	7437
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7439	24.344	NaN	9127.1	30	0	1837.7	0.106	+			4488	ATITDKELLKK	11	49	420.588676778753	1258.744200936459	3	420.59063720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATITDKELLKK_	ENSG00000131503|ENST00000360839|ANKHD1;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	27.64392233501311	0.6998289966465058	3				NaN	NaN	0	NaN	3759	3678	7437
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7440	24.346	NaN	2946.6	30	0	794.86	0.035			+	50231	WPEETGMW	8	54	518.2164087393762	1034.4182645455523	2	518.219970703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_WPEETGMW_	REV__POLRMT|p.A888T|1|0.38|ENSG00000099821|chr19:620466-620466|C/T|missense_variant	35.200714571348534	0.6875396545722289	3				NaN	NaN	0	NaN	3760	3678	7437
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7453	24.373	NaN	2655.7	30	0	692.2	0.142	+			12706	GEKRASALQ	9	50	480.2671095869968	958.5196662407936	2	480.26898193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEKRASALQ_	ENST00000572346.5_1_17:79526287-79533945:-|nuORF	70.8162118820467	0.13725933411854815	3				NaN	NaN	0	NaN	3770	3681	7452
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7467	24.405	NaN	17363	30	0	3879.5	0.214			+	34871	RYTLPQKLMQ	10	61	431.90377632692196	1292.689499580966	3	431.90521240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_RYTLPQKLM(Oxidation (M))Q_	REV__ENSG00000110723|ENST00000265843|EXPH5;REV__EXPH5|p.P345Qfs*45|1|0.43|ENSG00000110723|chr11:108514475-108514475|A/-|frameshift_variant;REV__nc|ENSG00000110723|Q8NEV8-2|EXPH5	40.05817265558897	0.5486090488315611	3				NaN	NaN	0	NaN	3781	3684	7466
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7468	24.408	NaN	1958.9	30	0	240.03	0.034	+			3580	ASVETGFAK	9	50	455.23728124345166	NaN	0	455.2366638183594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASVETGFAK_	ENSG00000042286|ENST00000307864|AIFM2;nc|ENSG00000042286|Q9BRQ8-2|AIFM2	90.60085204095205	0.040385177724871185	3				NaN	NaN	0	NaN	3782	3684	7466
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7493	24.465	NaN	6363.3	30	0	661.6	0.214			+	42519	TAPRRGPHG	9	72	474.75959988895954	947.5046468447191	2	474.76129150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAPRRGPHG_	REV__ENST00000540812.1_1_17:73888737-73892704:-|nuORF	60.97194046774394	0.20551255781574032	3				NaN	NaN	0	NaN	3801	3690	7492
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7494	24.469	NaN	2555.8	30	0	315.22	0.106	+			11648	FQHVGKAF	8	48	467.2509475839493	NaN	0	467.2509460449219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FQHVGKAF_	ENSG00000254772|ENST00000329251|EEF1G;ENST00000526409.5_1_11:62327153-62342310:-|nuORF;nc|ENSG00000254772|P26641-2|EEF1G;NCEH1-EEF1G|1|fusion	73.97473282117947	1.7418937515398478	3				NaN	NaN	0	NaN	3802	3690	7492
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7495	24.471	NaN	3513.6	30	0	712.3	0.033				-1	 	0	53	437.2545495307283	872.4945461282566	2	437.75762939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3803	3690	7492
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7519	24.525	NaN	1342.2	30	0	594.88	0.214	+			47992	VSPVESKYT	9	38	505.26267142222315	1008.5107899112463	2	505.2642822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSPVESKYT_	ENST00000421771.1_1_21:27843232-27843484:+|nuORF	26.69291269510374	0.5537881896960711	3				NaN	NaN	0	NaN	3821	3696	7518
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7520	24.528	NaN	1414.4	30	0	240.53	0.034			+	42020	SVYSRESQ	8	42	478.2267571277579	954.4389613223158	2	478.228759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVYSRESQ_	REV__tr|U7SM68|U7SM68_FUSNUOutermembraneproteinTolCOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02098PE=3SV=1	35.61828744233558	0.6843154725607303	3				NaN	NaN	0	NaN	3822	3696	7518
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7533	24.556	NaN	2685.5	30	0	288.95	0.144	+			43844	TLTLFLMTI	9	55	526.8071667849533	1051.5997806367066	2	526.8099975585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TLTLFLMTI_	ENSG00000187554|ENST00000642603|TLR5	40.77816245573522	0.41113185337114944	3				NaN	NaN	0	NaN	3832	3699	7532
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7545	24.583	NaN	2516	30	0	792.08	0.215	+			48163	VSYVEVVKK	9	37	350.87796993084777	NaN	0	350.87799072265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSYVEVVKK_	ENSG00000154556|ENST00000695409|SORBS2;nc|ENSG00000154556|O94875-10|SORBS2;nc|ENSG00000154556|O94875-11|SORBS2;nc|ENSG00000154556|O94875-12|SORBS2;nc|ENSG00000154556|O94875-2|SORBS2;nc|ENSG00000154556|O94875-3|SORBS2;nc|ENSG00000154556|O94875-4|SORBS2;nc|ENSG00000154556|O94875-5|SORBS2;nc|ENSG00000154556|O94875-7|SORBS2;nc|ENSG00000154556|O94875-8|SORBS2;nc|ENSG00000154556|O94875-9|SORBS2;nc|ENSG00000154556|O94875|SORBS2	35.15202426646627	0.3000918603816441	3				NaN	NaN	0	NaN	3841	3702	7544
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7546	24.586	NaN	1570.7	30	0	684.79	0.037			+	25066	LLLGVIFASGQ	11	33	373.22637939453125	NaN	0	373.22637939453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LLLGVIFASGQ_	REV__ENSG00000067208|ENST00000684568|EVI5;REV__ENSG00000142459|ENST00000538904|EVI5L;REV__ENST00000597440.5_1_19:7913809-7917719:+|nuORF;REV__EVI5L|p.K693Rfs*7|1|0.22|ENSG00000142459|chr19:7863251-7863251|A/-|frameshift_variant;REV__nc|ENSG00000067208|O60447-2|EVI5;REV__nc|ENSG00000067208|O60447|EVI5;REV__nc|ENSG00000142459|Q96CN4|EVI5L	28.5767321226876	0.4380616241468488	3				NaN	NaN	0	NaN	3842	3702	7544
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7571	24.646	NaN	1241.3	30	0	201.26	0.214	+			34106	RSQLVLVTK	9	45	522.3303748579704	1042.6461967827406	2	522.333251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RSQLVLVTK_	ENSG00000138496|ENST00000682323|PARP9;nc|ENSG00000138496|Q8IXQ6-3|PARP9;nc|ENSG00000138496|Q8IXQ6|PARP9;PARP9|p.T633Pfs*5|2|0.22|ENSG00000138496|chr3:122537047-122537047|T/-|frameshift_variant	74.1650062923329	0.12277912660386392	3				NaN	NaN	0	NaN	3861	3708	7570
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7572	24.65	NaN	2131.5	30	0	510.44	0.033	+			23528	LAHVGPRL	8	36	431.7656054884912	861.5166580437824	2	431.7664794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LAHVGPRL_	ENSG00000132207|ENST00000251303|SLX1A;ENSG00000181625|ENST00000330181|SLX1B;ENST00000565219.1_1_16:29466524-29469442:+|nuORF	28.2542754592877	0.7411748056684583	3				NaN	NaN	0	NaN	3862	3708	7570
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7584	24.676	NaN	4412.4	30	0	832.78	0.142				-1	 	0	50	454.24594692497266	906.4773409167453	2	454.2480163574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3871	3711	7583
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7597	24.705	NaN	802.81	30	0	201.43	0.143	+			13204	GICALLFEN	9	41	490.2487406749827	978.4829284167654	2	490.2474670410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GICALLFEN_	tr|U7STG7|U7STG7_FUSNUEamAdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01403PE=4SV=1	31.954861631926434	0.5046124803899898	3				NaN	NaN	0	NaN	3881	3714	7596
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7609	24.733	NaN	1134.5	30	0	307.86	0.141	+			27410	MKTSLRSG	8	32	440.2380676269531	NaN	0	440.2380676269531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MKTSLRSG_	ENSG00000196476|ENST00000360321|C20orf96	32.81241826257853	1.7418937515398478	3				NaN	NaN	0	NaN	3890	3717	7608
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7618	24.757	NaN	5085.5	30	0	1978.7	0.142			+	34689	RVTKTTTK	8	55	467.78771396334	933.5608749934801	2	467.7890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVTKTTTK_	REV__L1PA8_dup4178|chr8:94121319-94127043:-|4.057818296907117|0.2856926403965029|3.83|481.0|45|1|sense	38.80614096846853	0.6637206697844082	3				NaN	NaN	0	NaN	3896	3720	7617
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7624	24.775	NaN	8209.3	30	0	2293.5	0.214				-1	 	0	56	473.78001036674726	945.5454678002945	2	473.7818908691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3899	3723	7623
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7625	24.779	NaN	1191.8	30	0	189.46	0.035	+			45077	TVICSTINK	9	49	518.2793621639953	NaN	0	518.280029296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_TVIC(Carbamidomethyl (C))STINK_	ACTR3B-JMJD1C|1|fusion;ENSG00000171988|ENST00000399262|JMJD1C;JMJD1C|p.A2114Cfs*5|1|0.04|ENSG00000171988|chr10:63189399-63189400|-/T|frameshift_variant;JMJD1C|p.I2113Kfs*18|1|0.04|ENSG00000171988|chr10:63189400-63189401|-/TT|frameshift_variant;nc|ENSG00000171988|Q15652-2|JMJD1C;nc|ENSG00000171988|Q15652-3|JMJD1C	75.04331003522576	0.0883683072398826	3				NaN	NaN	0	NaN	3900	3723	7623
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7637	24.804	NaN	845.22	30	0	217.91	0.141	+			16042	HAVGPSTSL	9	26	434.7282208084916	867.4418886837832	2	434.7294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HAVGPSTSL_	ENSG00000140262|ENST00000333725|TCF12;nc|ENSG00000140262|Q99081-2|TCF12;nc|ENSG00000140262|Q99081-4|TCF12;nc|ENSG00000140262|Q99081|TCF12;TCF12|p.D536Afs*2|1|0.04|ENSG00000140262|chr15:57263207-57263208|-/C|frameshift_variant;TCF12|p.V474Mfs*18|1|0.15|ENSG00000140262|chr15:57262114-57262123|CTCTGTCAGT/-|frameshift_variant	30.503639358989545	0.5181749237905803	3				NaN	NaN	0	NaN	3909	3726	7636
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7648	24.832	NaN	4111	30	0	955.01	0.214				-1	 	0	46	458.77464165513396	915.534730377068	2	458.7766418457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3917	3729	7647
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7649	24.836	NaN	842.72	30	0	365.56	0.106	+			7992	DTAPVIHG	8	29	405.21105499518967	NaN	0	405.2110290527344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DTAPVIHG_	CHL1|p.E1008Vfs*9|1|0.09|ENSG00000134121|chr3:394848-394849|-/TGTCATTTACT|frameshift_variant;ENSG00000134121|ENST00000256509|CHL1;nc|ENSG00000134121|O00533|CHL1	28.2542754592877	1.7418937515398478	3				NaN	NaN	0	NaN	3918	3729	7647
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7650	24.838	NaN	841.85	30	0	357.53	0.106				-1	TARMCILQ	8	30	504.7554243755409	NaN	0	504.75531005859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_TARM(Oxidation (M))C(Carbamidomethyl (C))ILQ_	ENST00000367976.3_1_6:132269967-132270021:-|nuORF	30.503639358989545	1.7418937515398478	3				NaN	NaN	0	NaN	3919	3729	7647
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7651	24.839	NaN	555.07	30	0	63.443	0.035	+			39418	STDRLTVLK	9	35	516.8070678710938	NaN	0	516.8070678710938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STDRLTVLK_	ENSG00000138670|ENST00000264400|RASGEF1B;nc|ENSG00000138670|Q0VAM2-2|RASGEF1B;nc|ENSG00000138670|Q0VAM2-3|RASGEF1B;RASGEF1B|p.T323Lfs*5|1|0.3|ENSG00000138670|chr4:81442338-81442338|T/-|frameshift_variant	29.550750289552195	0.3283715283222214	3				NaN	NaN	0	NaN	3920	3729	7647
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7665	24.869	NaN	9661.2	30	0	1920.6	0.214			+	28000	MVVGTVWM	8	71	461.72896766897145	921.4433824047429	2	461.730712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MVVGTVWM_	REV__MFGE8|p.T143M|1|0.3|ENSG00000140545|chr15:88906738-88906738|G/A|missense_variant	81.71599410873499	0.3092752145733545	3				NaN	NaN	0	NaN	3931	3732	7664
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7666	24.873	NaN	2292.6	30	0	483.58	0.106				-1	 	0	50	427.7147343298415	853.4149157264831	2	427.7160949707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3932	3732	7664
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7667	24.875	NaN	2472.6	30	0	440.27	0.106	+			27128	MARPLSLAA	9	53	465.26643423968835	928.5183155461767	2	465.2685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MARPLSLAA_	ENST00000542380.1_19:20607607-20607751:-|nuORF	37.15910966729921	0.4535818937225704	3				NaN	NaN	0	NaN	3933	3732	7664
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7668	24.877	NaN	4221.5	30	0	827.37	0.044				-1	WTWSWMWSRER	11	52	542.9147660616649	1625.7224687851945	3	543.2512817382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_WTWSWM(Oxidation (M))WSRER_	HERV1_I-int_dup2|chr3:34679996-34686397:+|1.0948245018220069|0.0565463038051543|4.28|448.0|14|1|sense	5.412922219668071	0.8451432544508098	3				NaN	NaN	0	NaN	3934	3732	7664
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7679	24.902	NaN	2349.6	30	0	405.52	0.214				-1	 	0	47	484.78348710877077	967.5524212843416	2	484.7852478027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3942	3735	7678
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7680	24.906	NaN	1379.2	30	0	539.59	0.035			+	-1	ASCLVSFPF	9	37	514.2499537258917	1026.4853545185833	2	514.25244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_ASC(Carbamidomethyl (C))LVSFPF_	REV__ENST00000505047.1_1_Y:20981302-20981584:-|nuORF	30.503639358989545	0.5181749237905803	3				NaN	NaN	0	NaN	3943	3735	7678
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7694	24.936	NaN	4264.3	30	0	1260.5	0.143				-1	 	0	57	495.7754934951676	989.5364340571352	2	495.7770080566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3954	3738	7693
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7707	24.966	NaN	3921.5	30	0	1472.3	0.144	+			32285	QTMSDTTFK	9	51	529.7431989101979	1057.4718448871956	2	529.7466430664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QTMSDTTFK_	ENSG00000116489|ENST00000263168|CAPZA1;ENSG00000198898|ENST00000361183|CAPZA2;ENST00000426421.5_1_7:116544367-116557918:+|nuORF;ENST00000466066.1_1_1:113202257-113212751:+|nuORF;ENST00000565906.2_1_15:89532752-89533049:-|nuORF	40.05817265558897	0.419577045485086	3				NaN	NaN	0	NaN	3964	3741	7706
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7719	24.994	NaN	1678.7	30	0	406.13	0.141	+			48828	VVASPIAAR	9	47	442.27018689779527	882.5258208623906	2	442.2714538574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVASPIAAR_	ENSG00000184363|ENST00000331563|PKP3;nc|ENSG00000184363|Q9Y446-2|PKP3	60.97194046774394	0.20551255781574032	3				NaN	NaN	0	NaN	3973	3744	7718
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7734	25.028	NaN	2099.1	30	0	379.03	0.214	+			16185	HEAPGTFRV	9	51	507.26071807608156	1012.5068832189631	2	507.2620849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HEAPGTFRV_	ENSG00000163840|ENST00000296161|DTX3L;nc|ENSG00000163840|Q8TDB6-2|DTX3L	47.657333605630114	0.33044192980041115	3				NaN	NaN	0	NaN	3985	3747	7733
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7735	25.032	NaN	1880.6	30	0	485.75	0.033	+			39328	STAVGLVTK	9	46	438.2622896506103	874.5100263680206	2	438.2638244628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STAVGLVTK_	ASH1L|p.H1793Ifs*7|1|0.13|ENSG00000116539|chr1:155438778-155438778|G/-|frameshift_variant;ASH1L|p.I970Lfs*9|1|0.2|ENSG00000116539|chr1:155479962-155479962|T/-|frameshift_variant;ASH1L|p.K1222Rfs*11|4|0.27|ENSG00000116539|chr1:155479205-155479205|T/-|frameshift_variant;ASH1L|p.K1533Sfs*17|1|0.25|ENSG00000116539|chr1:155478272-155478272|T/-|frameshift_variant;ASH1L|p.K2377Nfs*5|1|0.28|ENSG00000116539|chr1:155354570-155354570|T/-|frameshift_variant;ASH1L|p.N1822Tfs*2|1|0.33|ENSG00000116539|chr1:155438690-155438690|T/-|frameshift_variant;ASH1L|p.R712Efs*23|3|0.35|ENSG00000116539|chr1:155480736-155480736|T/-|frameshift_variant;ASH1L|p.S2309Ifs*11|1|0.64|ENSG00000116539|chr1:155357635-155357636|-/T|frameshift_variant;ENSG00000116539|ENST00000392403|ASH1L;nc|ENSG00000116539|Q9NR48|ASH1L	101.25262130126117	0.03792372629710479	3				NaN	NaN	0	NaN	3986	3747	7733
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7745	25.055	NaN	13708	30	0	4593.1	0.214				-1	 	0	67	423.25695723063495	844.4993615280699	2	423.258544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3993	3750	7744
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7746	25.058	NaN	3110.4	30	0	868.99	0.106	+			33167	RETSMVHEL	9	45	551.269873061478	1100.525193189756	2	551.2725219726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RETSMVHEL_	ENSG00000058262|ENST00000243253|SEC61A1;ENST00000498837.1_1_3:127786720-127788502:+|nuORF;nc|ENSG00000058262|P61619-3|SEC61A1	24.519189625965996	0.574102787014149	3				NaN	NaN	0	NaN	3994	3750	7744
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7747	25.06	NaN	2180.9	30	0	360.77	0.035	+			16025	HATIVSEKL	9	56	499.28630743093936	996.5580619286787	2	499.2882385253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HATIVSEKL_	ENSG00000144063|ENST00000272462|MALL;ENST00000568189.5_1_2:111003217-111043255:+|nuORF	106.88024417677582	0.032181361622142884	3				NaN	NaN	0	NaN	3995	3750	7744
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7789	25.155	NaN	2571.1	30	0	254.31	0.214			+	7615	DKEPAVITK	9	52	500.78575007361013	999.5569472140203	2	500.78692626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DKEPAVITK_	REV__ENST00000493306.1_1_9:110249379-110249688:-|nuORF	51.52775601994872	0.28504342437107444	3				NaN	NaN	0	NaN	4028	3759	7788
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7790	25.159	NaN	1821.3	30	0	333.92	0.106				-1	 	0	46	491.7801604660851	981.5457679989702	2	491.781494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4029	3759	7788
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7791	25.161	NaN	1267	30	0	413.59	0.035			+	48520	VTNMIMKR	8	38	496.7733784295879	991.5322039259759	2	496.77392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTNMIMKR_	REV__ENST00000471759.5_1_1:76253197-76254868:+|nuORF	44.116797842482775	0.6307669463330267	3				NaN	NaN	0	NaN	4030	3759	7788
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7804	25.188	NaN	3202.5	30	0	1405.7	0.143			+	2220	ALRRDRSI	8	53	493.79622584932986	985.5778987654597	2	494.2994689941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ALRRDRSI_	REV__ENST00000574733.5_1_16:4519403-4524387:-|nuORF	35.61828744233558	0.6843154725607303	3				NaN	NaN	0	NaN	4040	3762	7803
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7818	25.219	NaN	3468.6	30	0	890.61	0.214				-1	 	0	62	469.2748458479721	936.5351387627442	2	469.2768249511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4051	3765	7817
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7819	25.223	NaN	3761.5	30	0	1067.1	0.106				-1	 	0	51	473.7800553514303	945.5455577696606	2	473.78167724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4052	3765	7817
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7820	25.225	NaN	880.39	30	0	150.95	0.106				-1	 	0	42	445.2515533059754	888.4885536787508	2	445.2529602050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4053	3765	7817
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7821	25.227	NaN	685.34	30	0	124.8	0.034			+	24420	LGAQAPPPAP	10	40	459.7573769030582	NaN	0	459.7572021484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LGAQAPPPAP_	REV__nc|ENSG00000159363|Q9NQ11-2|ATP13A2	37.15910966729921	0.3781637092648983	3				NaN	NaN	0	NaN	4054	3765	7817
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7833	25.252	NaN	1331.1	30	0	355.24	0.144	+			16827	HPDSRAIMY	9	47	545.2594120558946	1088.504271178589	2	545.2623901367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HPDSRAIMY_	ENSG00000116062|ENST00000234420|MSH6;MSH6|p.F882Lfs*24|1|0.31|ENSG00000116062|chr2:47800626-47800626|T/-|frameshift_variant;MSH6|p.G1105Wfs*3|2|0.25|ENSG00000116062|chr2:47803552-47803553|-/T|frameshift_variant;nc|ENSG00000116062|P52701-2|MSH6;nc|ENSG00000116062|P52701-3|MSH6;nc|ENSG00000116062|P52701-4|MSH6	39.252832667884924	0.4290233611298554	3				NaN	NaN	0	NaN	4063	3768	7832
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7845	25.279	NaN	2199	30	0	979.71	0.214	+			26050	LSLLYHVW	8	41	515.7906097287854	1029.5666665243707	2	515.7919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSLLYHVW_	ENSG00000058804|ENST00000371429|NDC1;nc|ENSG00000058804|Q9BTX1-2|NDC1;nc|ENSG00000058804|Q9BTX1-3|NDC1;nc|ENSG00000058804|Q9BTX1-4|NDC1;nc|ENSG00000058804|Q9BTX1-5|NDC1;nc|ENSG00000058804|Q9BTX1-6|NDC1	39.021493756699265	0.6623843612266921	3				NaN	NaN	0	NaN	4072	3771	7844
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7846	25.283	NaN	1826	30	0	453.18	0.106	+			8155	EAAKGTLTY	9	41	477.2487000576972	952.4828471821944	2	477.24981689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EAAKGTLTY_	ENST00000367855.7_1_6:134492115-134495951:-|nuORF;ENST00000367857.9_1_6:134495759-134495951:-|nuORF;ENST00000474427.6_1_6:134495647-134495951:-|nuORF;ENST00000530421.5_1_6:134495091-134495951:-|nuORF;ENST00000532856.5_1_6:134494408-134495951:-|nuORF;ENST00000534658.5_1_6:134494506-134495951:-|nuORF;nc|ENSG00000118515|O00141|SGK1	64.20726635412375	0.17854274437659667	3				NaN	NaN	0	NaN	4073	3771	7844
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7847	25.285	NaN	1303.7	30	0	386.48	0.032	+			43275	TFGGLGSK	8	26	383.7083966899721	NaN	0	383.7082824707031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TFGGLGSK_	ENSG00000124942|ENST00000378024|AHNAK	24.20275056022122	1.7418937515398478	3				NaN	NaN	0	NaN	4074	3771	7844
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7859	25.31	NaN	2010.8	30	0	612.39	0.214	+			27947	MVHNHLGVT	9	34	504.258012690206	1006.501472447212	2	504.26007080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MVHNHLGVT_	ENSG00000070159|ENST00000374541|PTPN3;PTPN3|p.P658Afs*20|1|0.15|ENSG00000070159|chr9:109391544-109391545|-/T|frameshift_variant	12.959181472943097	0.6112419832031292	3				NaN	NaN	0	NaN	4083	3774	7858
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7860	25.314	NaN	707.89	30	0	304.38	0.033			+	4383	ATHIEVPI	8	29	440.2498474121094	NaN	0	440.2498474121094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATHIEVPI_	REV__ENSG00000205038|ENST00000378402|PKHD1L1	35.200714571348534	1.7418937515398478	3				NaN	NaN	0	NaN	4084	3774	7858
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7875	25.345	NaN	625.65	30	0	98.209	0.143			+	-1	HRCCKGMK	8	29	518.236572265625	NaN	0	518.236572265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_HRCC(Carbamidomethyl (C))KGM(Oxidation (M))K_	REV__ENSG00000166351|ENST00000299443|POTED	19.359975847455235	1.7418937515398478	3				NaN	NaN	0	NaN	4096	3777	7874
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7886	25.372	NaN	2702.3	30	0	379.32	0.145	+			34693	RVTPFILKK	9	50	367.90968542079605	NaN	0	367.9095764160156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVTPFILKK_	ENSG00000175768|ENST00000321301|TOMM5;ENST00000354833.7_1_5:70213930-70214023:+|nuORF	63.53385203322761	0.134247007536971	3				NaN	NaN	0	NaN	4104	3780	7885
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7899	25.401	NaN	1132.8	30	0	136.58	0.144			+	21070	KKLNNKTKK	9	44	551.3588227212423	1100.7030925092845	2	551.3612670898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KKLNNKTKK_	REV__ARHGAP12|p.K628N|1|0.15|ENSG00000165322|chr10:31812774-31812774|T/G|missense_variant	47.657333605630114	0.33044192980041115	3				NaN	NaN	0	NaN	4114	3783	7898
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7918	25.448	NaN	2532.5	30	0	261.03	0.214	+			7825	DPVEPHGEM	9	57	505.71470582472574	1009.4148587162515	2	505.71636962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DPVEPHGEM_	ENSG00000130726|ENST00000253024|TRIM28;ENST00000601150.5_1_19:59059168-59060232:+|nuORF;nc|ENSG00000130726|Q13263-2|TRIM28	106.41520541750704	0.03265588207292361	3				NaN	NaN	0	NaN	4127	3789	7917
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7919	25.452	NaN	3431.3	30	0	979.8	0.034			+	-1	GGGCRGPEQ	9	52	459.1982355520765	916.381918170953	2	459.1998596191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GGGC(Carbamidomethyl (C))RGPEQ_	REV__ENST00000263904.4_1_2:153032177-153032426:-|nuORF	27.882242232435846	0.5426732730940306	3				NaN	NaN	0	NaN	4128	3789	7917
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7928	25.473	NaN	6977.5	30	0	2703.3	0.142	+			13605	GLWAVLAW	8	57	458.2586634114272	914.5027738896545	2	458.26123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GLWAVLAW_	ENSG00000079739|ENST00000371084|PGM1;nc|ENSG00000079739|P36871-2|PGM1;nc|ENSG00000079739|P36871-3|PGM1;PGM1|p.A512Pfs*33|1|0.23|ENSG00000079739|chr1:63654398-63654398|G/-|frameshift_variant	67.3271909547111	0.42924334279516513	3				NaN	NaN	0	NaN	4134	3792	7927
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7938	25.498	NaN	1599.6	30	0	700.25	0.143			+	25291	LNVIINQY	8	33	488.77507761658694	975.5356022999739	2	488.7756652832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LNVIINQY_	REV__DNAH14|p.I2559Nfs*2|1|0.39|ENSG00000185842|chr1:225337448-225337449|-/A|frameshift_variant;REV__DNAH14|p.T2021Hfs*9|1|0.38|ENSG00000185842|chr1:225289906-225289906|A/-|frameshift_variant;REV__ENSG00000185842|ENST00000682510|DNAH14;REV__nc|ENSG00000185842|Q0VDD8-4|DNAH14;REV__nc|ENSG00000185842|Q0VDD8|DNAH14	18.324413293986947	0.7971860551947066	3				NaN	NaN	0	NaN	4141	3795	7937
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7952	25.53	NaN	2370.6	30	0	523.89	0.142	+			43883	TMSSNFLGL	9	47	485.2388453230306	968.4631377128612	2	485.2402648925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TMSSNFLGL_	ENSG00000136869|ENST00000355622|TLR4;nc|ENSG00000136869|O00206-2|TLR4;nc|ENSG00000136869|O00206-3|TLR4;TLR4|p.Q423H|1|0.4|ENSG00000136869|chr9:117713397-117713397|A/C|missense_variant	53.351449002276354	0.2690372970092375	3				NaN	NaN	0	NaN	4152	3798	7951
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7966	25.561	NaN	2369.9	30	0	676.77	0.142			+	29798	PIWSTSDH	8	46	471.7189873179936	941.4234217027872	2	471.7208557128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PIWSTSDH_	REV__ENST00000310118.8_1_3:184025202-184025241:+|nuORF	28.2542754592877	0.7411748056684583	3				NaN	NaN	0	NaN	4163	3801	7965
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7990	25.617	NaN	6619.3	30	0	588.02	0.215	+			47786	VSIEAGSAVGK	11	71	509.2811645862257	1016.5477762392514	2	509.28369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSIEAGSAVGK_	ENSG00000176945|ENST00000447234|MUC20;ENST00000457750.1_1_3:195341833-195346985:+|nuORF;nc|ENSG00000176945|Q8N307-3|MUC20	150.81021883065287	6.916300504743181E-05	3				NaN	NaN	0	NaN	4181	3807	7989
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7991	25.621	NaN	2547.1	30	0	718.38	0.106			+	17435	IAVGKEKS	8	46	416.2488121038996	830.4830712745992	2	416.25048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IAVGKEKS_	REV__ENST00000435067.2_1_13:46254770-46254863:-|nuORF	47.91560031466742	0.6071945918984287	3				NaN	NaN	0	NaN	4182	3807	7989
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7992	25.623	NaN	5816.2	30	0	2280.6	0.035				-1	 	0	37	334.5366988553158	1000.5882671661475	3	334.53790283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4183	3807	7989
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8006	25.652	NaN	3856.2	30	0	1726.7	0.214			+	44480	TSRKRRWS	8	41	359.5404475985034	1075.5995133957103	3	359.5417175292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSRKRRWS_	REV__ENST00000467906.5_1_6:43030793-43034124:+|nuORF	15.641811463095205	0.7929430624199021	3				NaN	NaN	0	NaN	4194	3810	8005
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8007	25.656	NaN	1263.9	30	0	140.5	0.106	+			1351	AEVDKVARL	9	44	500.79287291797647	NaN	0	500.79290771484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEVDKVARL_	ENSG00000013523|ENST00000251089|ANGEL1	85.16082228582465	0.053699699744190164	3				NaN	NaN	0	NaN	4195	3810	8005
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8008	25.658	NaN	7764.9	30	0	1819.2	0.034				-1	 	0	56	461.2640517434294	920.5135505536588	2	461.7687072753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4196	3810	8005
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8025	25.693	NaN	2673.7	30	0	1063.8	0.214				-1	 	0	47	400.2540548796136	798.4935568260272	2	400.2553405761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4210	3813	8024
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8026	25.696	NaN	1717.5	30	0	171.16	0.035	+			19942	KEFMRQVL	8	58	525.7927461902947	1049.5709394473893	2	525.7951049804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEFMRQVL_	DHX16|p.I1033*|5|0.32|ENSG00000204560|chr6:30653271-30653271|T/-|frameshift_variant;ENSG00000204560|ENST00000376442|DHX16	51.33545320467046	0.5859736979383976	3				NaN	NaN	0	NaN	4211	3813	8024
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8037	25.722	NaN	1125.9	30	0	312.57	0.214	+			591	ADLISSLGK	9	47	452.2605895996094	NaN	0	452.2605895996094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ADLISSLGK_	ENSG00000142197|ENST00000691173|DOP1B;nc|ENSG00000142197|Q9Y3R5-2|DOP1B;REV__ARHGEF1|p.G859Afs*4|1|0.32|ENSG00000076928|chr19:41906537-41906537|G/-|frameshift_variant;REV__ARHGEF1|p.L344Wfs*12|2|0.31|ENSG00000076928|chr19:41896386-41896386|C/-|frameshift_variant;REV__ENSG00000076928|ENST00000354532|ARHGEF1;REV__ENST00000600274.5_1_19:42396347-42410935:+|nuORF;REV__nc|ENSG00000076928|Q92888-2|ARHGEF1;REV__nc|ENSG00000076928|Q92888-3|ARHGEF1;REV__nc|ENSG00000076928|Q92888-4|ARHGEF1	44.377184641726394	0.24544280798894275	3				NaN	NaN	0	NaN	4219	3816	8036
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8038	25.725	NaN	3362.1	30	0	242.42	0.106	+			21241	KLKERSSK	8	62	488.30083652917045	974.5871201251409	2	488.3027648925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KLKERSSK_	ENSG00000100815|ENST00000267622|TRIP11;nc|ENSG00000100815|Q15643-2|TRIP11;TRIP11|p.K1010Sfs*12|1|0.15|ENSG00000100815|chr14:92004947-92004947|T/-|frameshift_variant;TRIP11|p.N841Mfs*4|1|0.27|ENSG00000100815|chr14:92005454-92005454|T/-|frameshift_variant;TRIP11|p.T971Qfs*34|1|0.43|ENSG00000100815|chr14:92005065-92005065|T/-|frameshift_variant	76.7741389293348	0.3504530765139327	3				NaN	NaN	0	NaN	4220	3816	8036
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8039	25.727	NaN	5522.7	30	0	2174.3	0.036	+			6229	AVRTQRRR	8	36	348.21582984929364	1041.625660148081	3	348.21697998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVRTQRRR_	ENSG00000132823|ENST00000255174|OSER1	17.364965105453717	0.7956685240855921	3				NaN	NaN	0	NaN	4221	3816	8036
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8054	25.759	NaN	6237.1	30	0	3174	0.214	+			33303	RGRADQLTL	9	45	515.2936286008041	1028.5727042684082	2	515.2962646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RGRADQLTL_	ENST00000346872.7_2_17:37921598-37921754:-|nuORF	54.776311868738084	0.25715957988447635	3				NaN	NaN	0	NaN	4233	3819	8053
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8055	25.762	NaN	3262.9	30	0	407	0.036	+			41940	SVVRNVFDF	9	56	541.7844884868839	1081.5544240405677	2	541.7869262695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVVRNVFDF_	ENSG00000102763|ENST00000379310|VWA8;nc|ENSG00000102763|A3KMH1-2|VWA8;nc|ENSG00000102763|A3KMH1-3|VWA8;VWA8|p.D1438Ifs*16|1|0.27|ENSG00000102763|chr13:41685063-41685063|T/-|frameshift_variant;VWA8|p.G1575Efs*53|1|0.25|ENSG00000102763|chr13:41611729-41611729|C/-|frameshift_variant;VWA8|p.T1319Kfs*27|1|0.09|ENSG00000102763|chr13:41690186-41690186|G/-|frameshift_variant	45.97224482568171	0.3502073465782774	3				NaN	NaN	0	NaN	4234	3819	8053
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8072	25.888	NaN	598.45	30	0	123.16	0.147				-1	TAMLALLTHQF	11	25	421.2252197265625	NaN	0	421.2252197265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_TAM(Oxidation (M))LALLTHQF_	ENSG00000004866|ENST00000323984|ST7;ENST00000464020.1_1_7:116859112-116863031:+|nuORF;nc|ENSG00000004866|Q9NRC1-2|ST7;nc|ENSG00000004866|Q9NRC1-3|ST7;nc|ENSG00000004866|Q9NRC1-4|ST7;nc|ENSG00000004866|Q9NRC1-5|ST7;nc|ENSG00000004866|Q9NRC1-6|ST7;nc|ENSG00000004866|Q9NRC1|ST7	20.030474535948922	0.456735970842152	3				NaN	NaN	0	NaN	4248	3822	8071
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8088	25.923	NaN	19699	30	0	10365	0.214	+			508	ACINWVKY	8	61	498.75176951639656	995.4889860995931	2	498.75335693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ACINWVKY_	ENSG00000079999|ENST00000171111|KEAP1	71.37791200682192	0.3954169775488141	3				NaN	NaN	0	NaN	4261	3825	8087
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8089	25.927	NaN	11925	30	0	4484.4	0.106	+			7857	DQYGMLYK	8	57	509.23872161661023	1016.4628903000205	2	509.2408447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DQYGMLYK_	ENSG00000224470|ENST00000427980|ATXN1L	96.19043198914106	0.25873003980794995	3				NaN	NaN	0	NaN	4262	3825	8087
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8090	25.929	NaN	9112.5	30	0	1019.5	0.106	+			9997	ERLLCYGW	8	67	520.2542989495723	1038.4940449659446	2	520.2565307617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ERLLCYGW_	nc|ENSG00000174407|Q9H1L0|MIR1-1HG	71.29570347882199	0.39610197767395533	3				NaN	NaN	0	NaN	4263	3825	8087
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8091	25.931	NaN	2016.3	30	0	901.03	0.106			+	32682	RAFLIFHV	8	42	501.79894326629864	1001.5833335993973	2	501.8005676269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RAFLIFHV_	REV__ENSG00000182208|ENST00000329957|MOB2;REV__nc|ENSG00000182208|Q70IA6|MOB2	28.2542754592877	0.7411748056684583	3				NaN	NaN	0	NaN	4264	3825	8087
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8092	25.933	NaN	1935.3	30	0	285.32	0.106			+	28494	NGSPLFIW	8	47	467.24575921442283	932.4769654956457	2	467.24725341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NGSPLFIW_	REV__ENST00000366905.3_1_6:161653288-161695010:-|nuORF	71.37791200682192	0.3954169775488141	3				NaN	NaN	0	NaN	4265	3825	8087
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8093	25.934	NaN	1098.9	30	0	373.55	0.106				-1	FGTKCARC	8	42	471.7189873179936	941.4234217027872	2	471.7203369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_FGTKC(Carbamidomethyl (C))ARC_	ENSG00000106852|ENST00000394319|LHX6;nc|ENSG00000106852|Q9UPM6-2|LHX6;nc|ENSG00000106852|Q9UPM6-4|LHX6;nc|ENSG00000106852|Q9UPM6-5|LHX6;nc|ENSG00000106852|Q9UPM6|LHX6	31.954861631926434	0.7126016770032289	3				NaN	NaN	0	NaN	4266	3825	8087
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8094	25.936	NaN	1455.6	30	0	490.19	0.035	+			43503	TGSAPFGTKI	10	59	489.767089615005	NaN	0	489.7681884765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TGSAPFGTKI_	ENST00000561088.1_1_15:65281344-65281524:-|nuORF	35.15202426646627	0.38475398474706135	3				NaN	NaN	0	NaN	4267	3825	8087
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8108	25.966	NaN	1872.2	30	0	408.67	0.214	+			17033	HPVQHISF	8	47	482.7518665348631	963.4891801365262	2	482.7535705566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HPVQHISF_	ENSG00000174989|ENST00000652555|FBXW8;nc|ENSG00000174989|Q8N3Y1-2|FBXW8	68.78682469695295	0.41700713582915416	3				NaN	NaN	0	NaN	4278	3828	8107
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8109	25.969	NaN	933.16	30	0	163.67	0.032	+			35337	SAPASQASL	9	36	416.2139917648152	NaN	0	416.21405029296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAPASQASL_	ENSG00000137497|ENST00000393695|NUMA1;ENST00000540626.5_1_11:71714575-71718510:-|nuORF;nc|ENSG00000137497|Q14980-2|NUMA1;nc|ENSG00000137497|Q14980-5|NUMA1	58.22992032128504	0.15686832049467786	3				NaN	NaN	0	NaN	4279	3828	8107
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8158	26.085	NaN	7041	30	0	4112.5	0.214			+	-1	CHPRNSCSVTN	11	44	444.5236840904628	1330.5492228715884	3	444.52545166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))HPRNSC(Carbamidomethyl (C))SVTN_	REV__ENSG00000145777|ENST00000344895|TSLP	18.531049691330335	0.7837198200183355	3				NaN	NaN	0	NaN	4316	3840	8157
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8159	26.088	NaN	1480.9	30	0	310.39	0.034			+	-1	KSAMGSAIAV	10	42	475.7515869140625	NaN	0	475.7515869140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_KSAM(Oxidation (M))GSAIAV_	REV__tr|U7T4T7|U7T4T7_FUSNU1-deoxy-D-xylulose-5-phosphatesynthaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00548PE=3SV=1	30.317721548370564	0.4006274431774794	3				NaN	NaN	0	NaN	4317	3840	8157
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8169	26.11	NaN	3023.6	30	0	548.92	0.214	+			29859	PLERFLLY	8	63	525.8023329240783	1049.5901129149565	2	525.8060302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PLERFLLY_	ASB11|p.P313T|1|0.19|ENSG00000165192|chrX:15283540-15283540|G/T|missense_variant;ENSG00000165192|ENST00000480796|ASB11;nc|ENSG00000165192|Q8WXH4-2|ASB11;nc|ENSG00000165192|Q8WXH4-3|ASB11	54.76467175910256	0.5536104764165384	3				NaN	NaN	0	NaN	4324	3843	8168
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8170	26.114	NaN	1138.7	30	0	240.7	0.106	+			13881	GRAQGRGGQA	10	34	479.25190836846065	956.4892638037213	2	479.25408935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GRAQGRGGQA_	ENSG00000107829|ENST00000331272|FBXW4;FBXW4|p.P292Qfs*86|1|0.46|ENSG00000107829|chr10:101612444-101612444|A/-|frameshift_variant	27.882242232435846	0.6521336255503853	3				NaN	NaN	0	NaN	4325	3843	8168
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8171	26.115	NaN	2390	30	0	1140.8	0.039				-1	ECGVCKCTDPK	11	40	432.85152721032426	NaN	0	432.51776123046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_ECGVC(Carbamidomethyl (C))KC(Carbamidomethyl (C))TDPK_	ENSG00000150093|ENST00000302278|ITGB1;nc|ENSG00000150093|P05556-2|ITGB1;nc|ENSG00000150093|P05556-3|ITGB1;nc|ENSG00000150093|P05556-4|ITGB1;nc|ENSG00000150093|P05556-5|ITGB1	25.891714612410027	0.45002760985531187	3				NaN	NaN	0	NaN	4326	3843	8168
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8198	26.176	NaN	1531.7	30	0	365.61	0.142	+			5497	AVADSVLTK	9	51	452.2593498869532	902.5041468407064	2	452.2615966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVADSVLTK_	ENSG00000173821|ENST00000582970|RNF213;ENST00000559070.5_1_17:78261823-78310301:+|nuORF;nc|ENSG00000173821|Q63HN8-4|RNF213;nc|ENSG00000173821|Q63HN8|RNF213;RNF213|p.C5022Lfs*7|1|0.3|ENSG00000173821|chr17:80389237-80389237|G/-|frameshift_variant;RNF213|p.P2167Lfs*64|1|0.09|ENSG00000173821|chr17:80344834-80344835|-/T|frameshift_variant;RNF213|p.Q1953Rfs*50|2|0.13|ENSG00000173821|chr17:80340219-80340219|C/-|frameshift_variant	49.536043120802724	0.308405419312776	3				NaN	NaN	0	NaN	4347	3849	8197
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8213	26.208	NaN	8715.3	30	0	3700	0.214			+	2611	AQHHAHLRLT	10	47	395.21916551177617	1182.6356671355286	3	395.2205810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AQHHAHLRLT_	REV__ENST00000572599.5_2_16:21170028-21172422:+|nuORF	30.568863376406313	0.6301935916953115	3				NaN	NaN	0	NaN	4359	3852	8212
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8214	26.212	NaN	1406.3	30	0	350.29	0.035	+			33307	RGRHEVGAL	9	50	497.78031113539055	993.5460693375811	2	497.7822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RGRHEVGAL_	ENSG00000136718|ENST00000259239|IMP4;ENST00000460766.5_1_2:131100637-131104038:+|nuORF;ENST00000462392.5_1_2:131100637-131103595:+|nuORF;ENST00000473689.5_1_2:131100487-131103328:+|nuORF	28.081489160057373	0.5408112046645406	3				NaN	NaN	0	NaN	4360	3852	8212
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8225	26.237	NaN	2989.9	30	0	1518.2	0.148	+			49281	VVQERESLLVK	11	38	433.92461240942123	1298.7520078284638	3	433.92535400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVQERESLLVK_	ENSG00000096696|ENST00000379802|DSP;nc|ENSG00000096696|P15924-2|DSP;nc|ENSG00000096696|P15924-3|DSP	43.650786325866115	0.5079891456189096	3				NaN	NaN	0	NaN	4368	3855	8224
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8239	26.268	NaN	2940.4	30	0	653.39	0.214				-1	 	0	48	464.2411044353757	926.4676559375514	2	464.2428894042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4379	3858	8238
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8240	26.272	NaN	2404.8	30	0	1110.8	0.106	+			31048	QEVVDGKVV	9	49	486.7699479893278	971.5253430454557	2	486.77154541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QEVVDGKVV_	CON__P35900;ENSG00000171431|ENST00000167588|KRT20;KRT20|p.V404M|1|0.22|ENSG00000171431|chr17:40876426-40876426|C/T|missense_variant	75.04331003522576	0.118981335847003	3				NaN	NaN	0	NaN	4380	3858	8238
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8241	26.274	NaN	4204.4	30	0	608.23	0.106			+	21624	KPRGRKKK	8	57	499.340666165496	996.666779397792	2	499.3420715332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KPRGRKKK_	REV__ENSG00000152217|ENST00000649279|SETBP1;REV__SETBP1|p.F1174Lfs*13|1|0.35|ENSG00000152217|chr18:44952858-44952858|T/-|frameshift_variant;REV__SETBP1|p.G1249Efs*3|1|0.36|ENSG00000152217|chr18:44953080-44953080|A/-|frameshift_variant;REV__SETBP1|p.T581A|1|0.1|ENSG00000152217|chr18:44951081-44951081|A/G|missense_variant	49.44154591367651	0.597725784090933	3				NaN	NaN	0	NaN	4381	3858	8238
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8242	26.276	NaN	1955.4	30	0	259.16	0.106	+			676	AEAKEKIYL	9	56	532.8016001816956	1063.588647430191	2	532.804443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEAKEKIYL_	ENSG00000133706|ENST00000394434|LARS1;ENST00000508667.5_1_5:145522961-145531505:-|nuORF;nc|ENSG00000133706|Q9P2J5-2|LARS1	84.9155231211612	0.07920012719736333	3				NaN	NaN	0	NaN	4382	3858	8238
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8243	26.278	NaN	1288.4	30	0	375.44	0.106	+			40595	SVAGLSVTK	9	36	431.25598767677343	NaN	0	431.2554626464844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVAGLSVTK_	ENSG00000197841|ENST00000492450|ZNF181;ZNF181|p.K248Sfs*36|1|0.29|ENSG00000197841|chr19:34741122-34741125|CAAA/-|frameshift_variant;ZNF181|p.V107Lfs*2|1|0.15|ENSG00000197841|chr19:34740695-34740695|A/-|frameshift_variant;ZNF181|p.Y52H|1|0.07|ENSG00000197841|chr19:34739546-34739546|T/C|missense_variant	39.252832667884924	0.27938773122138094	3				NaN	NaN	0	NaN	4383	3858	8238
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8244	26.279	NaN	1116.4	30	0	280.49	0.034				-1	 	0	39	459.24873303747563	916.4829131417513	2	459.2508239746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4384	3858	8238
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8258	26.309	NaN	2656.1	30	0	451.52	0.214			+	32996	REFAGKKAAE	10	55	553.802518278587	NaN	0	553.8023681640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_REFAGKKAAE_	REV__ABCA2|p.G2110Afs*11|1|0.41|ENSG00000107331|chr9:137010217-137010217|C/-|frameshift_variant;REV__ENSG00000107331|ENST00000341511|ABCA2;REV__ENST00000459850.5_1_9:139905575-139923366:-|nuORF;REV__ENST00000487109.5_1_9:139906084-139911410:-|nuORF;REV__nc|ENSG00000107331|Q9BZC7-2|ABCA2;REV__nc|ENSG00000107331|Q9BZC7-4|ABCA2;REV__nc|ENSG00000107331|Q9BZC7|ABCA2	46.45678178249821	0.32800322091223805	3				NaN	NaN	0	NaN	4395	3861	8257
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8259	26.312	NaN	1671.3	30	0	380.71	0.106				-1	 	0	48	451.7492228287961	901.4838927243923	2	451.7508850097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4396	3861	8257
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8260	26.314	NaN	1118.7	30	0	315.68	0.106			+	-1	ACMMALHPK	9	42	509.23872161661023	1016.4628903000205	2	509.2420654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_ACMM(Oxidation (M))ALHPK_	REV__ENSG00000076604|ENST00000262395|TRAF4;REV__ENST00000502593.2_1_5:143131699-143132191:-|nuORF	26.79610172149135	0.5528238334041078	3				NaN	NaN	0	NaN	4397	3861	8257
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8261	26.316	NaN	1700.7	30	0	180.6	0.036	+			38045	SPQPDGKVVY	10	58	545.280844016398	1088.5471350995958	2	545.7831420898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SPQPDGKVVY_	ENSG00000170892|ENST00000396388|TSEN34	42.33807565288922	0.5276008846745733	3				NaN	NaN	0	NaN	4398	3861	8257
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8276	26.348	NaN	2899.6	30	0	581.47	0.214				-1	 	0	50	451.7492228287961	901.4838927243923	2	451.7505798339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4410	3864	8275
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8277	26.351	NaN	1722	30	0	686.72	0.034	+			40182	STQTALTLK	9	40	481.7783264971514	961.5421000611028	2	481.7799072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STQTALTLK_	ENSG00000172123|ENST00000304905|SLFN12;SLFN12|p.V491Cfs*4|1|0.28|ENSG00000172123|chr17:35411605-35411605|T/-|frameshift_variant	89.02883481214508	0.06760336634167786	3				NaN	NaN	0	NaN	4411	3864	8275
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8288	26.375	NaN	1796.5	30	0	688.12	0.143	+			36652	SGLSLLERL	9	22	329.864795687487	986.572557662661	3	329.8662414550781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SGLSLLERL_	ADGRA3|p.L367Sfs*98|1|0.04|ENSG00000152990|chr4:22436621-22436627|CCTGCCA/-|frameshift_variant;ENSG00000152990|ENST00000334304|ADGRA3;ENST00000514129.5_2_4:22444476-22475438:-|nuORF;nc|ENSG00000152990|Q8IWK6-2|ADGRA3	18.324413293986947	0.6112419832031293	3				NaN	NaN	0	NaN	4419	3867	8287
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8302	26.406	NaN	2373	30	0	950.86	0.214	+			47419	VPQRRSEN	8	51	493.2624062940626	984.5102596549252	2	493.2640075683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VPQRRSEN_	ENST00000428457.1_1_7:47317609-47317696:-|nuORF	38.80614096846853	0.6637206697844082	3				NaN	NaN	0	NaN	4430	3870	8301
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8303	26.41	NaN	3572	30	0	1783.5	0.106	+			31323	QIQDSIVTK	9	52	516.2888038107867	1030.5630546883733	2	516.291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QIQDSIVTK_	ENSG00000180855|ENST00000301547|ZNF443;ENSG00000196466|ENST00000430385|ZNF799;nc|ENSG00000196466|Q96GE5-2|ZNF799;ZNF443|p.W208Gfs*34|1|0.3|ENSG00000180855|chr19:12431550-12431550|A/-|frameshift_variant	47.95952297671804	0.32689736945648856	3				NaN	NaN	0	NaN	4431	3870	8301
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8304	26.412	NaN	1078.7	30	0	743.49	0.03	+			48971	VVGGGALA	8	17	322.19269235939254	642.3708317855851	2	322.1940612792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVGGGALA_	ENST00000421890.5_1_7:5862807-5863047:+|nuORF	5.08689130490037	0.7762486542322466	3				NaN	NaN	0	NaN	4432	3870	8301
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8324	26.46	NaN	2663.6	30	0	701.37	0.142			+	5037	ATSERHPR	8	43	477.2489935746351	952.4834342160702	2	477.2510070800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSERHPR_	REV__ENST00000520791.5_1_8:99956672-99956810:+|nuORF	44.116797842482775	0.6307669463330267	3				NaN	NaN	0	NaN	4446	3876	8323
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8337	26.489	NaN	4118.3	30	0	490.46	0.214	+			12349	GDLICLIL	8	49	458.76219460107984	915.5098362689597	2	458.76434326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GDLIC(Carbamidomethyl (C))LIL_	ENSG00000100225|ENST00000266087|FBXO7	57.452649787351945	0.526999880452039	3				NaN	NaN	0	NaN	4456	3879	8336
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8338	26.493	NaN	1437.2	30	0	432.97	0.033				-1	 	0	40	424.73334171279396	847.4521304923879	2	424.7348327636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4457	3879	8336
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8349	26.517	NaN	2203.2	30	0	634.72	0.215	+			8544	EAVKPTVGM	9	50	466.24776318954855	930.4809734458971	2	466.2497253417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EAVKPTVGM_	ENSG00000164323|ENST00000458385|CFAP97	44.116797842482775	0.37197099687881774	3				NaN	NaN	0	NaN	4465	3882	8348
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8350	26.52	NaN	4099.4	30	0	369.69	0.034				-1	 	0	59	483.76459363968144	965.5146343461629	2	483.7662048339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4466	3882	8348
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8372	26.572	NaN	658.71	30	0	63.304	0.214			+	21345	KLYEKGSVE	9	42	526.7844848632812	NaN	0	526.7844848632812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KLYEKGSVE_	REV__tr|U7SSC8|U7SSC8_FUSNUPolaraminoacidtransportsystemsubstrate-bindingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01586PE=3SV=1	62.107414245175825	0.1403307765918332	3				NaN	NaN	0	NaN	4482	3888	8371
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8373	26.576	NaN	3302.8	30	0	420.48	0.034				-1	 	0	48	471.25432657601016	940.4941002188203	2	471.25616455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4483	3888	8371
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8386	26.603	NaN	752.1	30	0	116.77	0.142			+	46242	VEDLHNSI	8	34	463.7324290046646	NaN	0	463.7323913574219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VEDLHNSI_	REV__ENSG00000103852|ENST00000394132|TTC23;REV__nc|ENSG00000103852|Q5W5X9-2|TTC23;REV__nc|ENSG00000103852|Q5W5X9-3|TTC23;REV__TTC23|p.A114Pfs*47|1|0.26|ENSG00000103852|chr15:99219014-99219014|T/-|frameshift_variant	38.80614096846853	1.7418937515398478	3				NaN	NaN	0	NaN	4493	3891	8385
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8397	26.628	NaN	2007.1	30	0	445.74	0.142	+			32129	QSLKAMRP	8	48	465.7641466265015	929.513740319803	2	465.76580810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QSLKAMRP_	ENSG00000133488|ENST00000255858|SEC14L4;ENST00000320982.3_1_22:30886096-30887579:-|nuORF;ENST00000321205.9_1_22:30886096-30899699:-|nuORF	30.503639358989545	0.7238069182250283	3				NaN	NaN	0	NaN	4501	3894	8396
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8410	26.658	NaN	1600.2	30	0	875.08	0.142	+			28521	NIEFITAGG	9	49	461.23745030510594	NaN	0	461.2374572753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NIEFITAGG_	ENSG00000145555|ENST00000513610|MYO10;MYO10|p.G1223Rfs*28|1|0.25|ENSG00000145555|chr5:16694504-16694505|-/T|frameshift_variant;MYO10|p.I417Tfs*39|1|0.05|ENSG00000145555|chr5:16764326-16764327|-/ACAAATCTCTG|frameshift_variant;MYO10|p.N507Qfs*30|1|0.11|ENSG00000145555|chr5:16762613-16762614|-/TG|frameshift_variant;MYO10|p.S468Ffs*8|1|0.05|ENSG00000145555|chr5:16763679-16763680|-/A|frameshift_variant	42.86426827375447	0.2558691296974908	3				NaN	NaN	0	NaN	4511	3897	8409
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8440	26.731	NaN	3174.4	30	0	552.56	0.214			+	46087	VCWLRPPA	8	47	471.25432657601016	940.4941002188203	2	471.255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VCWLRPPA_	REV__ARAP3|p.P843Qfs*72|3|0.38|ENSG00000120318|chr5:141666468-141666468|G/-|frameshift_variant;REV__ENSG00000120318|ENST00000239440|ARAP3;REV__nc|ENSG00000120318|Q8WWN8-2|ARAP3	29.841539824830324	0.7289191502596711	3				NaN	NaN	0	NaN	4532	3906	8439
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8441	26.735	NaN	2233.6	30	0	961.51	0.106			+	-1	SAFSSCHVPR	10	31	383.1830790322595	1146.5274076969786	3	383.1846618652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SAFSSC(Carbamidomethyl (C))HVPR_	REV__ENST00000316059.6_1_11:58352348-58378460:+|nuORF	16.71738777980365	0.7315012293134124	3				NaN	NaN	0	NaN	4533	3906	8439
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8442	26.737	NaN	1993.5	30	0	242.66	0.035	+			7668	DLATWNFQ	8	56	497.73526252821165	993.4559721232233	2	497.7369689941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DLATWNFQ_	ENSG00000169410|ENST00000618819|PTPN9;PTPN9|p.L251P|1|0.09|ENSG00000169410|chr15:75505891-75505891|A/G|missense_variant	34.172542307311794	0.6954784234644539	3				NaN	NaN	0	NaN	4534	3906	8439
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8456	26.766	NaN	1020.5	30	0	192.27	0.144	+			5626	AVCYQAITK	9	40	527.27392578125	NaN	0	527.27392578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_AVC(Carbamidomethyl (C))YQAITK_	ENSG00000140632|ENST00000321919|GLYR1;nc|ENSG00000140632|Q49A26-3|GLYR1;nc|ENSG00000140632|Q49A26-4|GLYR1;nc|ENSG00000140632|Q49A26-5|GLYR1	44.377184641726394	0.24544280798894275	3				NaN	NaN	0	NaN	4545	3909	8455
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8477	26.817	NaN	1625	30	0	261.59	0.215	+			40614	SVAKNFFTK	9	51	521.2882882944956	1040.562023655791	2	521.291748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVAKNFFTK_	ENSG00000169891|ENST00000357277|REPS2;nc|ENSG00000169891|Q8NFH8-4|REPS2	37.50817390946774	0.44948750990682723	3				NaN	NaN	0	NaN	4560	3915	8476
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8478	26.82	NaN	2160.6	30	0	251.48	0.032				-1	 	0	48	413.26192344897225	824.5092939647445	2	413.2635498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4561	3915	8476
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8496	26.865	NaN	3736.4	30	0	773.98	0.141	+			16723	HLGALLAR	8	55	425.76644387161446	NaN	0	425.7666931152344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HLGALLAR_	ENSG00000187094|ENST00000396169|CCK;ENST00000484359.1_1_3:42304789-42306234:-|nuORF	74.51659920185547	1.7418937515398478	3				NaN	NaN	0	NaN	4573	3921	8495
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8526	26.933	NaN	606.65	30	0	160.68	0.142	+			50312	WSVLATPW	8	26	480.25299072265625	NaN	0	480.25299072265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WSVLATPW_	DLEC1|p.Y1310Mfs*121|1|0.59|ENSG00000008226|chr3:38116521-38116521|T/-|frameshift_variant	33.51558372728122	1.7418937515398478	3				NaN	NaN	0	NaN	4597	3927	8525
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8539	26.962	NaN	1513.7	30	0	508.55	0.143	+			29734	PHPPGGLQAPA	11	39	521.2756176561766	1040.536682379153	2	521.2788696289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PHPPGGLQAPA_	ENST00000318080.6_1_9:131857444-131857552:-|nuORF	21.9598887501803	0.7594498734240387	3				NaN	NaN	0	NaN	4607	3930	8538
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8550	26.988	NaN	2455.2	30	0	587.85	0.144	+			11048	FEMTVEKY	8	40	531.7447478941698	1061.4749428551395	2	531.7476196289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_FEM(Oxidation (M))TVEKY_	GGNBP2|p.V346Yfs*20|2|0.22|ENSG00000278311|chr17:36581354-36581354|A/-|frameshift_variant	55.50420428727701	0.5462892107279674	3				NaN	NaN	0	NaN	4615	3933	8549
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8562	27.016	NaN	1580.3	30	0	190.08	0.141	+			37619	SLQAQVVL	8	45	429.25826871838353	NaN	0	429.2578430175781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLQAQVVL_	ENSG00000163702|ENST00000403601|IL17RC;ENST00000451271.5_1_3:9958923-9975274:+|nuORF;ENST00000483582.5_1_3:9958999-9974679:+|nuORF;nc|ENSG00000288550|Q8NAC3-3|IL17RC;nc|ENSG00000288550|Q8NAC3-4|IL17RC;nc|ENSG00000288550|Q8NAC3-5|IL17RC;nc|ENSG00000288550|Q8NAC3-6|IL17RC;nc|ENSG00000288550|Q8NAC3-7|IL17RC;nc|ENSG00000288550|Q8NAC3-8|IL17RC;nc|ENSG00000288550|Q8NAC3|IL17RC	71.87747018426188	1.7418937515398478	3				NaN	NaN	0	NaN	4624	3936	8561
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8576	27.047	NaN	5128.3	30	0	2148.3	0.145	+			37519	SLLLSSLLTSA	11	35	368.8878332059886	1103.641670218166	3	368.8888854980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLLLSSLLTSA_	ENST00000486101.1_1_17:73894933-73895551:-|nuORF	31.634271133179894	0.6579734920221648	3				NaN	NaN	0	NaN	4635	3939	8575
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8588	27.074	NaN	1097.8	30	0	175.27	0.143	+			33389	RIATGSFLK	9	50	496.79681507437414	991.5790772155483	2	496.79815673828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RIATGSFLK_	ENSG00000128050|ENST00000512576|PAICS;ENST00000517543.1_1_8:4645110-4645266:+|nuORF;nc|ENSG00000128050|P22234-2|PAICS	45.02220120713402	0.3613509778819777	3				NaN	NaN	0	NaN	4644	3942	8587
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8611	27.13	NaN	1724	30	0	136.79	0.144	+			16131	HEADKTYML	9	50	554.2589913659658	1106.5034297987315	2	554.2608032226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HEADKTYML_	ENSG00000143155|ENST00000367833|TIPRL	85.16082228582465	0.07850854922700509	3				NaN	NaN	0	NaN	4661	3948	8610
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8626	27.163	NaN	1109.1	30	0	131.63	0.214	+			38517	SSCGLPLGK	9	44	459.7393735891237	NaN	0	459.7395324707031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SSC(Carbamidomethyl (C))GLPLGK_	ENSG00000064042|ENST00000503057|LIMCH1;nc|ENSG00000064042|Q9UPQ0-10|LIMCH1;nc|ENSG00000064042|Q9UPQ0-2|LIMCH1;nc|ENSG00000064042|Q9UPQ0-3|LIMCH1;nc|ENSG00000064042|Q9UPQ0-4|LIMCH1;nc|ENSG00000064042|Q9UPQ0-5|LIMCH1;nc|ENSG00000064042|Q9UPQ0-6|LIMCH1;nc|ENSG00000064042|Q9UPQ0-8|LIMCH1;nc|ENSG00000064042|Q9UPQ0-9|LIMCH1;nc|ENSG00000064042|Q9UPQ0|LIMCH1	56.72105179125745	0.16330365735109603	3				NaN	NaN	0	NaN	4673	3951	8625
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8627	27.167	NaN	585.69	30	0	91.59	0.035			+	24298	LFDAICQVI	9	36	511.2748388275791	NaN	0	511.2746887207031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LFDAICQVI_	REV__ENSG00000156510|ENST00000354624|HKDC1;REV__ENSG00000159399|ENST00000290573|HK2;REV__nc|ENSG00000156510|Q2TB90-2|HKDC1;REV__nc|ENSG00000156510|Q2TB90-3|HKDC1	28.081489160057373	0.33578952234132536	3				NaN	NaN	0	NaN	4674	3951	8625
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8639	27.192	NaN	1333.3	30	0	252.27	0.214	+			50851	YEVKSENL	8	48	491.2468578660608	980.4791627989216	2	491.2481689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YEVKSENL_	ENSG00000132383|ENST00000254719|RPA1	74.25504064058377	0.37144338840759816	3				NaN	NaN	0	NaN	4683	3954	8638
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8640	27.196	NaN	1172.1	30	0	266.92	0.106	+			17335	IAIDNAINY	9	39	503.76428369368136	1005.5140144541627	2	503.7664489746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IAIDNAINY_	tr|U7SSK6|U7SSK6_FUSNUSigma-BregulationproteinRsbU(Phosphoserinephosphatase)OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01485PE=4SV=1	53.351449002276354	0.2690372970092375	3				NaN	NaN	0	NaN	4684	3954	8638
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8641	27.198	NaN	1476.4	30	0	236.58	0.106				-1	 	0	40	452.25931193707515	902.5040709409503	2	452.26129150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4685	3954	8638
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8642	27.199	NaN	3850.7	30	0	429.17	0.043			+	33903	RRRRWMGCWTR	11	54	521.9406881425286	1562.8002350277857	3	521.9439086914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RRRRWMGCWTR_	REV__ENSG00000110665|ENST00000381153|C11orf21	17.16674453292914	0.7901079503840427	3				NaN	NaN	0	NaN	4686	3954	8638
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8652	27.221	NaN	2930.5	30	0	401.67	0.214			+	30884	QEKFRLAW	8	60	539.2970737955561	1076.5795946579121	2	539.8016967773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QEKFRLAW_	REV__ASB4|p.Y370Lfs*10|1|0.31|ENSG00000005981|chr7:95537581-95537582|-/T|frameshift_variant;REV__ENSG00000005981|ENST00000325885|ASB4;REV__nc|ENSG00000005981|Q9Y574-2|ASB4	51.33545320467046	0.5859736979383976	3				NaN	NaN	0	NaN	4693	3957	8651
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8653	27.225	NaN	1335.8	30	0	452.86	0.034			+	-1	VPVALRCI	8	40	464.2768047359936	926.5390565387872	2	464.279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_VPVALRC(Carbamidomethyl (C))I_	REV__nc|ENSG00000166473|Q7Z442-3|PKD1L2;REV__nc|ENSG00000166473|Q7Z442|PKD1L2	44.53106598305862	0.628196326904373	3				NaN	NaN	0	NaN	4694	3957	8651
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8671	27.27	NaN	7759.8	30	0	5678.6	0.214	+			24552	LGLSAAPG	8	21	343.1977727198635	684.380992506527	2	343.19891357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LGLSAAPG_	COL11A2|p.G956Wfs*11|1|0.1|ENSG00000204248|chr6:33171740-33171741|-/G|frameshift_variant;COL11A2|p.I664Rfs*5|1|0.25|ENSG00000204248|chr6:33176034-33176035|TA/-|frameshift_variant;COL11A2|p.P811Lfs*87|1|0.54|ENSG00000204248|chr6:33173394-33173394|G/-|frameshift_variant;ENSG00000204248|ENST00000341947|COL11A2;nc|ENSG00000204248|P13942-2|COL11A2;nc|ENSG00000204248|P13942-3|COL11A2;nc|ENSG00000204248|P13942-4|COL11A2;nc|ENSG00000204248|P13942-5|COL11A2;nc|ENSG00000204248|P13942-6|COL11A2;nc|ENSG00000204248|P13942-7|COL11A2;nc|ENSG00000204248|P13942-8|COL11A2;nc|ENSG00000204248|P13942-9|COL11A2;nc|ENSG00000204248|P13942|COL11A2	10.184766708764876	0.7843118145031319	3				NaN	NaN	0	NaN	4706	3963	8670
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8672	27.273	NaN	628.56	30	0	103.46	0.035	+			44487	TSSDVIEMK	9	33	505.2472434094048	NaN	0	505.24749755859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TSSDVIEMK_	ENSG00000039123|ENST00000230640|MTREX	29.170058357718403	0.3302935627494407	3				NaN	NaN	0	NaN	4707	3963	8670
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8682	27.295	NaN	3123.9	30	0	583.29	0.142	+			38135	SQADGSFLK	9	57	476.74052503069345	NaN	0	476.74102783203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SQADGSFLK_	ENSG00000152818|ENST00000367545|UTRN;nc|ENSG00000152818|P46939-2|UTRN;UTRN|p.G3160*|1|0.03|ENSG00000152818|chr6:144821001-144821002|AG/-|frameshift_variant;UTRN|p.R3003Pfs*5|1|0.27|ENSG00000152818|chr6:144793915-144793916|-/C|frameshift_variant;UTRN|p.T2422Hfs*35|1|0.47|ENSG00000152818|chr6:144557282-144557282|A/-|frameshift_variant	66.96192283764107	0.11962625698446946	3				NaN	NaN	0	NaN	4714	3966	8681
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8708	27.355	NaN	1778.3	30	0	210.16	0.144	+			35997	SEHVKLEQL	9	47	541.7942147478251	1081.57387656245	2	541.7964477539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEHVKLEQL_	ARHGAP1|p.L237Cfs*135|2|0.38|ENSG00000175220|chr11:46680674-46680674|G/-|frameshift_variant;ARHGAP1|p.L237Rfs*135|1|0.37|ENSG00000175220|chr11:46680673-46680673|A/-|frameshift_variant;ENSG00000175220|ENST00000311956|ARHGAP1	63.53385203322761	0.18415635464017938	3				NaN	NaN	0	NaN	4734	3972	8707
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8744	27.44	NaN	3399.4	30	0	722.05	0.214			+	-1	IMGVAMKR	8	54	461.2538861433038	920.4932193534077	2	461.25567626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_IMGVAM(Oxidation (M))KR_	REV__ENSG00000163406|ENST00000489711|SLC15A2;REV__nc|ENSG00000163406|Q16348-2|SLC15A2;REV__SLC15A2|p.N718Tfs*2|1|0.11|ENSG00000163406|chr3:121940965-121940965|G/-|frameshift_variant	28.2542754592877	0.7411748056684583	3				NaN	NaN	0	NaN	4761	3981	8743
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8745	27.444	NaN	1793.3	30	0	360.36	0.033	+			7964	DSSKSVVI	8	42	417.7307595348909	833.4469661365819	2	417.7315979003906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DSSKSVVI_	TBC1D8B|p.I360V|1|0.35|ENSG00000133138|chrX:106827212-106827212|A/G|missense_variant	68.78682469695295	0.41700713582915416	3				NaN	NaN	0	NaN	4762	3981	8743
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8777	27.521	NaN	2897.4	30	0	383.55	0.214	+			37158	SIVKESILK	9	53	508.8197338575188	1015.6249147818377	2	508.821533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIVKESILK_	ENST00000436367.5_1_6:16658088-16761588:-|nuORF	88.17693792209575	0.07000514020414955	3				NaN	NaN	0	NaN	4785	3990	8776
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8778	27.525	NaN	1360.3	30	0	149.41	0.033	+			434	AAVDAGMAM	9	34	426.6832390071045	NaN	0	426.68328857421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_AAVDAGM(Oxidation (M))AM_	ENSG00000011304|ENST00000356948|PTBP1;ENST00000586944.5_1_19:797434-805231:+|nuORF;nc|ENSG00000011304|P26599-1|PTBP1;nc|ENSG00000011304|P26599-2|PTBP1	76.84663266511073	0.08218905260741291	3				NaN	NaN	0	NaN	4786	3990	8776
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8792	27.554	NaN	2656.6	30	0	425.55	0.144	+			17225	HVITKTMEL	9	64	536.2951057145222	1070.5756584958442	2	536.2984008789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HVITKTMEL_	ENSG00000153201|ENST00000283195|RANBP2;RANBP2|p.F3068Lfs*10|1|0.06|ENSG00000153201|chr2:108782692-108782692|T/-|frameshift_variant;RANBP2|p.H3114Sfs*18|1|0.33|ENSG00000153201|chr2:108782827-108782828|-/T|frameshift_variant	75.04331003522576	0.118981335847003	3				NaN	NaN	0	NaN	4797	3993	8791
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8805	27.583	NaN	7208.8	30	0	2224.3	0.215				-1	 	0	56	462.24324333980604	922.4719337464121	2	462.2455139160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4807	3996	8804
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8806	27.587	NaN	907.34	30	0	122.6	0.034			+	46060	VCIFDRSK	8	44	484.2586018015759	NaN	0	484.2589416503906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VCIFDRSK_	REV__ENSG00000167139|ENST00000300504|TBC1D21	31.954861631926434	1.7418937515398478	3				NaN	NaN	0	NaN	4808	3996	8804
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8818	27.612	NaN	2192.7	30	0	765.34	0.214			+	39782	STKSIKIIP	9	36	329.5462051803902	NaN	0	329.5461120605469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STKSIKIIP_	REV__ITIH5|p.R670I|1|0.57|ENSG00000123243|chr10:7573165-7573165|C/A|missense_variant	40.77816245573522	0.2702456086868081	3				NaN	NaN	0	NaN	4817	3999	8817
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8819	27.615	NaN	745.7	30	0	85.017	0.035	+			21503	KNLRLRKD	8	35	521.8263549804688	NaN	0	521.8263549804688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KNLRLRKD_	ENSG00000196350|ENST00000601693|ZNF729;ENSG00000213973|ENST00000596209|ZNF99	40.5726180659479	1.7418937515398478	3				NaN	NaN	0	NaN	4818	3999	8817
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8831	27.641	NaN	2766.4	30	0	1007.3	0.214			+	37121	SITANIWK	8	42	466.763206433541	931.511859933882	2	466.7651672363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SITANIWK_	REV__ENSG00000189099|ENST00000455694|PRSS48;REV__nc|ENSG00000189099|Q7RTY5-3|PRSS48	47.657333605630114	0.6087971902037268	3				NaN	NaN	0	NaN	4827	4002	8830
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8832	27.645	NaN	674.27	30	0	84.378	0.034			+	48046	VSSAVPLAAV	10	31	457.2713623046875	NaN	0	457.2713623046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSSAVPLAAV_	REV__BIRC6|p.A1071Lfs*23|1|0.39|ENSG00000115760|chr2:32431053-32431053|G/-|frameshift_variant;REV__BIRC6|p.I2261Yfs*13|1|0.3|ENSG00000115760|chr2:32476268-32476268|A/-|frameshift_variant;REV__BIRC6|p.I914Yfs*2|1|0.07|ENSG00000115760|chr2:32416027-32416027|A/-|frameshift_variant;REV__BIRC6|p.K3585Sfs*8|1|0.32|ENSG00000115760|chr2:32515171-32515171|A/-|frameshift_variant;REV__BIRC6|p.M418Nfs*8|1|0.25|ENSG00000115760|chr2:32401379-32401380|-/A|frameshift_variant;REV__BIRC6|p.P1736Qfs*17|1|0.37|ENSG00000115760|chr2:32464770-32464770|C/-|frameshift_variant;REV__BIRC6|p.R1406Dfs*3|1|0.35|ENSG00000115760|chr2:32442431-32442431|C/-|frameshift_variant;REV__BIRC6|p.S2648Ffs*25|1|0.08|ENSG00000115760|chr2:32487769-32487770|-/T|frameshift_variant;REV__BIRC6|p.S3504Mfs*5|1|0.15|ENSG00000115760|chr2:32513095-32513098|TAGT/-|frameshift_variant;REV__BIRC6|p.T1339Qfs*21|1|0.44|ENSG00000115760|chr2:32442131-32442131|A/-|frameshift_variant;REV__ENSG00000115760|ENST00000421745|BIRC6	35.61828744233558	0.3832230071539346	3				NaN	NaN	0	NaN	4828	4002	8830
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8846	27.674	NaN	3060	30	0	581.16	0.214			+	-1	KCKCKGSLV	9	64	511.77791308602787	1021.5412732388558	2	511.7799072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_KC(Carbamidomethyl (C))KCKGSLV_	REV__ENSG00000150201|ENST00000476166|FXYD4	58.78195531508484	0.22376836668196862	3				NaN	NaN	0	NaN	4839	4005	8845
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8847	27.678	NaN	3156.8	30	0	726.73	0.033				-1	 	0	54	422.7410900962722	843.4676272593445	2	422.7421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4840	4005	8845
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8859	27.703	NaN	40255	30	0	8739.3	0.214				-1	 	0	84	401.24183564921213	1200.7036775478364	3	401.2435607910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4849	4008	8858
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8860	27.707	NaN	1605.3	30	0	413.5	0.106			+	37226	SKNFSHEY	8	45	506.2301895784249	1010.4458262236499	2	506.2324523925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SKNFSHEY_	REV__nc|ENSG00000112414|Q86SQ4-2|ADGRG6;REV__nc|ENSG00000112414|Q86SQ4|ADGRG6	37.15910966729921	0.6739408393984688	3				NaN	NaN	0	NaN	4850	4008	8858
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8861	27.709	NaN	1684.7	30	0	220.55	0.036			+	9285	EHLKLYYI	8	57	539.805006847878	NaN	0	539.8058471679688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EHLKLYYI_	REV__ENSG00000205085|ENST00000682356|GARIN1A;REV__nc|ENSG00000205085|Q6NXP2|GARIN1A	42.47446043378293	1.7418937515398478	3				NaN	NaN	0	NaN	4851	4008	8858
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8873	27.734	NaN	1781.5	30	0	1404.7	0.139			+	45719	VAASLGAP	8	17	343.1974834305402	684.3804139278805	2	343.1988220214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VAASLGAP_	REV__ENSG00000171503|ENST00000511912|ETFDH;REV__ENST00000514148.1_1_4:159603282-159605833:+|nuORF;REV__nc|ENSG00000171503|Q16134-3|ETFDH	15.63621529709179	0.7929342111279789	3				NaN	NaN	0	NaN	4860	4011	8872
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8952	27.928	NaN	3715.4	30	0	662.24	0.214				-1	 	0	60	464.7931522542607	927.5717515753214	2	464.79498291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4918	4032	8951
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8953	27.932	NaN	2664	30	0	829.01	0.106				-1	 	0	44	414.2516861429267	826.4888193526534	2	414.2535705566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4919	4032	8951
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8954	27.934	NaN	5901.6	30	0	2319.9	0.037	+			3133	ASHKPSEILE	10	54	370.86468559575303	NaN	0	370.8649597167969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASHKPSEILE_	ENSG00000170185|ENST00000307017|USP38;nc|ENSG00000170185|Q8NB14-2|USP38;USP38|p.K823Nfs*2|1|0.24|ENSG00000170185|chr4:143214440-143214440|A/-|frameshift_variant;USP38|p.L816Hfs*13|1|0.05|ENSG00000170185|chr4:143214419-143214420|-/ATCATATGAAA|frameshift_variant	48.601550744091256	0.31444367966696773	3				NaN	NaN	0	NaN	4920	4032	8951
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8965	27.959	NaN	1190.3	30	0	119.17	0.144	+			27720	MQLFMRAGR	9	38	555.293666352369	NaN	0	555.2942504882812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MQLFMRAGR_	ENST00000608644.1_1_22:46449264-46449396:+|nuORF	35.61828744233558	0.29773779453147337	3				NaN	NaN	0	NaN	4928	4035	8964
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8977	27.986	NaN	3860.2	30	0	637.62	0.142			+	22820	KVFSDLQA	8	57	454.24682889432626	906.4791048554525	2	454.2480773925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVFSDLQA_	REV__ENSG00000173230|ENST00000614479|GOLGB1;REV__GOLGB1|p.D2495Tfs*21|1|0.22|ENSG00000173230|chr3:121691867-121691867|T/-|frameshift_variant;REV__nc|ENSG00000173230|Q14789-2|GOLGB1;REV__nc|ENSG00000173230|Q14789-3|GOLGB1;REV__nc|ENSG00000173230|Q14789-4|GOLGB1;REV__nc|ENSG00000173230|Q14789|GOLGB1	58.22992032128504	0.519305013932957	3				NaN	NaN	0	NaN	4937	4038	8976
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8989	28.013	NaN	5899.3	30	0	944.78	0.141				-1	 	0	60	444.24952384998363	886.4844947667673	2	444.2509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4946	4041	8988
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9026	28.1	NaN	4005.3	30	0	679.33	0.142	+			28052	NAAQTSVAY	9	51	462.72431144379175	923.4340699543835	2	462.7249755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAAQTSVAY_	ENSG00000113643|ENST00000231572|RARS1;nc|ENSG00000113643|P54136-2|RARS1	134.81075121484326	0.012914550297035062	3				NaN	NaN	0	NaN	4974	4050	9025
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9032	28.118	NaN	1348.3	30	0	947.24	0.141	+			13507	GLPHSSPW	8	20	440.7196279716638	879.4247030101276	2	440.7208251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GLPHSSPW_	nc|ENSG00000280109|Q8WY50|PLAC4	14.664097394203935	0.7913966407026132	3				NaN	NaN	0	NaN	4977	4053	9031
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9046	28.149	NaN	4635.9	30	0	928.32	0.142				-1	 	0	52	457.2751808960517	912.5358088589035	2	457.27728271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4988	4056	9045
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9058	28.176	NaN	5984.2	30	0	1703.3	0.145	+			44698	TTISELLESQ	10	62	560.7897352640385	1119.564917594877	2	560.7923583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTISELLESQ_	tr|U7STI5|U7STI5_FUSNUPeptide/nickeltransportsystemsubstrate-bindingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01497PE=4SV=1	37.50817390946774	0.5721060100277453	3				NaN	NaN	0	NaN	4997	4059	9057
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9069	28.203	NaN	2002.4	30	0	467.27	0.214				-1	 	0	43	409.73332343207204	817.4520939309441	2	409.7347106933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5005	4062	9068
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9070	28.206	NaN	907	30	0	74.398	0.038	+			27248	MERIMKAQAL	10	37	595.8239932630662	NaN	0	595.8233642578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MERIMKAQAL_	ENSG00000080824|ENST00000216281|HSP90AA1;ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000378770.1_1_4:190394307-190396341:+|nuORF;ENST00000506915.1_1_4:190395906-190396341:+|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000205100|Q58FG1|HSP90AA4P	37.59989570853033	0.37671638597750867	3				NaN	NaN	0	NaN	5006	4062	9068
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9082	28.232	NaN	5353.4	30	0	473.39	0.214			+	31463	QKVDSNAY	8	68	462.72431144379175	923.4340699543835	2	463.2298583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QKVDSNAY_	REV__ENSG00000204711|ENST00000377197|CFAP95	34.172542307311794	0.6954784234644539	3				NaN	NaN	0	NaN	5015	4065	9081
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9083	28.235	NaN	2946	30	0	981.23	0.037	+			4481	ATITDKELLK	10	31	377.8922174251491	NaN	0	378.2268371582031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATITDKELLK_	ENSG00000131503|ENST00000360839|ANKHD1;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	22.579656572578934	0.4201028297492154	3				NaN	NaN	0	NaN	5016	4065	9081
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9094	28.261	NaN	2126.1	30	0	444.09	0.141	+			36432	SEVAMHSL	8	50	437.2107117243128	NaN	0	437.21099853515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEVAMHSL_	ENSG00000100290|ENST00000216115|BIK	68.78682469695295	1.7418937515398478	3				NaN	NaN	0	NaN	5024	4068	9093
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9108	28.292	NaN	1969.3	30	0	283.45	0.214			+	50578	YCLTLASLL	9	53	498.7754644363128	995.5363759394256	2	498.7767639160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YCLTLASLL_	REV__ENSG00000113269|ENST00000521389|RNF130;REV__ENST00000521901.5_1_5:179382656-179390574:-|nuORF	57.81127852772723	0.2318599694398087	3				NaN	NaN	0	NaN	5035	4071	9107
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9109	28.296	NaN	2238.5	30	0	387.72	0.034	+			41785	SVSQAVFAR	9	45	482.76226665769394	963.5099803821879	2	482.76348876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVSQAVFAR_	ENSG00000119042|ENST00000417098|SATB2;ENST00000483346.2_1_2:200213306-200233427:-|nuORF;nc|ENSG00000119042|Q9UPW6-2|SATB2	138.06239232086	0.011389075116295402	3				NaN	NaN	0	NaN	5036	4071	9107
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9143	28.375	NaN	5033.3	30	0	2915.7	0.214	+			9188	EGQLGPAERAK	11	34	385.87554297377216	1154.6047995215165	3	385.87689208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EGQLGPAERAK_	ENSG00000167658|ENST00000309311|EEF2	23.52269567125451	0.7430573033454468	3				NaN	NaN	0	NaN	5061	4080	9142
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9144	28.378	NaN	847.09	30	0	122.13	0.034	+			17278	IAANVLSKE	9	40	472.7747739638536	NaN	0	472.7746887207031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IAANVLSKE_	ENSG00000067596|ENST00000262415|DHX8;ENST00000587044.1_1_17:41568567-41594747:+|nuORF	32.81241826257853	0.3119040447479903	3				NaN	NaN	0	NaN	5062	4080	9142
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9165	28.427	NaN	5704.2	30	0	1886.1	0.214				-1	 	0	40	392.7542942221794	783.4940355111588	2	392.7560119628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5077	4086	9164
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9166	28.431	NaN	1478	30	0	282.43	0.106	+			31341	QISLSLGLCT	10	50	517.7820054777009	NaN	0	517.7824096679688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QISLSLGLCT_	HERV1_I-int_dup2|chr3:34679996-34686397:+|1.0948245018220069|0.0565463038051543|4.28|448.0|359|3|anti-sense	47.657333605630114	0.3204131577145918	3				NaN	NaN	0	NaN	5078	4086	9164
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9167	28.432	NaN	3037.3	30	0	1169.7	0.034			+	29810	PKGCLRLK	8	50	457.7849803088205	913.555407684441	2	457.7865905761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PKGCLRLK_	REV__ENSG00000197563|ENST00000640252|PIGN;REV__ENST00000587942.1_1_18:59713091-59751818:-|nuORF	24.20275056022122	0.7724576178584145	3				NaN	NaN	0	NaN	5079	4086	9164
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9180	28.46	NaN	13676	30	0	2696.8	0.214				-1	 	0	69	458.77458351804125	915.5346141028825	2	458.77667236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5089	4089	9179
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9181	28.463	NaN	1307.7	30	0	184.8	0.106			+	29253	NYALRVVGY	9	54	527.7894904582511	NaN	0	527.7892456054688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NYALRVVGY_	REV__CAMKK1|p.R457Tfs*8|1|0.39|ENSG00000004660|chr17:3865984-3865985|-/T|frameshift_variant;REV__ENSG00000004660|ENST00000348335|CAMKK1;REV__ENST00000573483.1_1_17:3785816-3788993:-|nuORF;REV__nc|ENSG00000004660|Q8N5S9-2|CAMKK1	53.351449002276354	0.18359631779194618	3				NaN	NaN	0	NaN	5090	4089	9179
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9182	28.465	NaN	9074.7	30	0	3442.1	0.106	+			16696	HKKKIQPR	8	50	345.5572575674171	1033.6499433024512	3	345.5583190917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HKKKIQPR_	ENSG00000178804|ENST00000324382|H1-8	24.20275056022122	0.7724576178584145	3				NaN	NaN	0	NaN	5091	4089	9179
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9183	28.467	NaN	1321.6	30	0	381.06	0.035	+			16616	HGTVVALRY	9	52	508.28772589067137	NaN	0	508.28765869140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HGTVVALRY_	ENSG00000110013|ENST00000263593|SIAE;nc|ENSG00000110013|Q9HAT2-2|SIAE	54.776311868738084	0.17377682019723872	3				NaN	NaN	0	NaN	5092	4089	9179
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9195	28.492	NaN	692.15	30	0	140.81	0.14	+			12866	GEQTGLLP	8	27	407.71869320978465	NaN	0	407.7187805175781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEQTGLLP_	ENST00000230053.10_1_6:71571672-71665663:-|nuORF	40.5726180659479	1.7418937515398478	3				NaN	NaN	0	NaN	5101	4092	9194
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9238	28.597	NaN	7058.1	30	0	2422.1	0.214				-1	 	0	50	450.2797531610703	898.5449533889406	2	450.2820739746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5132	4104	9237
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9239	28.6	NaN	1634	30	0	129.25	0.035	+			29501	PDEGRGHGRG	10	49	519.2465442820618	1036.4785356309235	2	519.2493286132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PDEGRGHGRG_	ENSG00000266714|ENST00000645453|MYO15B;nc|ENSG00000266714|Q96JP2-2|MYO15B	47.657333605630114	0.47858658696240314	3				NaN	NaN	0	NaN	5133	4104	9237
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9257	28.646	NaN	1372.5	30	0	336.71	0.142	+			19365	KALEAVFGK	9	42	481.78723907944664	NaN	0	481.78704833984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KALEAVFGK_	ENSG00000147274|ENST00000320676|RBMX;ENST00000565907.1_1_X:135961433-135961586:-|nuORF;ENST00000567262.5_1_X:135958813-135961586:-|nuORF;nc|ENSG00000147274|P38159-2|RBMX;nc|ENSG00000147274|P38159-3|RBMX	68.84614121027924	0.11159004992091766	3				NaN	NaN	0	NaN	5145	4110	9256
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9264	28.666	NaN	2109.6	30	0	348.07	0.214			+	4335	ATGLVVRDD	9	50	473.25486327366116	944.4951736141223	2	473.25726318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATGLVVRDD_	REV__ENSG00000119283|ENST00000366653|TRIM67;REV__nc|ENSG00000119283|Q6ZTA4-2|TRIM67	39.252832667884924	0.4290233611298554	3				NaN	NaN	0	NaN	5149	4113	9263
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9265	28.67	NaN	1869.9	30	0	310.1	0.033	+			5891	AVLAISHY	8	48	437.24669785842934	NaN	0	437.24639892578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVLAISHY_	ENSG00000162434|ENST00000342505|JAK1;JAK1|p.K860Nfs*16|3|0.29|ENSG00000162434|chr1:64841314-64841314|T/-|frameshift_variant;JAK1|p.L346Tfs*4|1|0.28|ENSG00000162434|chr1:64864927-64864928|-/T|frameshift_variant;JAK1|p.N339Ifs*3|2|0.36|ENSG00000162434|chr1:64864947-64864947|T/-|frameshift_variant	35.200714571348534	1.7418937515398478	3				NaN	NaN	0	NaN	5150	4113	9263
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9275	28.692	NaN	1026.7	30	0	245.64	0.143	+			37119	SISYEGFNI	9	40	515.247461330841	1028.480369728482	2	515.2501220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SISYEGFNI_	CSMD1|p.P1459Qfs*24|1|0.09|ENSG00000183117|chr8:3223840-3223840|G/-|frameshift_variant;CSMD3|p.A3641Cfs*13|1|0.36|ENSG00000164796|chr8:112228799-112228800|-/A|frameshift_variant;CSMD3|p.F3640Lfs*61|7|0.35|ENSG00000164796|chr8:112228800-112228800|A/-|frameshift_variant;CSMD3|p.G3063Rfs*5|1|0.06|ENSG00000164796|chr8:112287208-112287209|-/G|frameshift_variant;CSMD3|p.L2190Yfs*46|1|0.29|ENSG00000164796|chr8:112341560-112341560|A/-|frameshift_variant;CSMD3|p.S2534Ifs*8|1|0.04|ENSG00000164796|chr8:112314002-112314003|-/GACACTAT|frameshift_variant;ENSG00000164796|ENST00000297405|CSMD3;ENSG00000183117|ENST00000635120|CSMD1;ENST00000523488.5_1_8:3008913-3253839:-|nuORF;nc|ENSG00000164796|Q7Z407-2|CSMD3;nc|ENSG00000164796|Q7Z407-3|CSMD3;nc|ENSG00000164796|Q7Z407-4|CSMD3;nc|ENSG00000164796|Q7Z407-5|CSMD3;nc|ENSG00000183117|Q96PZ7-2|CSMD1;nc|ENSG00000183117|Q96PZ7-3|CSMD1;nc|ENSG00000183117|Q96PZ7-4|CSMD1	39.252832667884924	0.4290233611298554	3				NaN	NaN	0	NaN	5157	4116	9274
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9284	28.713	NaN	2764.2	30	0	587.22	0.143	+			44492	TSSGFIAAMV	10	49	492.2466488441932	982.4787447551864	2	492.24822998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSSGFIAAMV_	ENST00000492522.3_2_17:46781973-46782216:+|nuORF	53.351449002276354	0.42630798468005626	3				NaN	NaN	0	NaN	5163	4119	9283
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9295	28.739	NaN	6979.6	30	0	1127.4	0.214				-1	 	0	63	437.7463471557117	873.4781413782234	2	437.7476501464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5171	4122	9294
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9296	28.743	NaN	1222.1	30	0	397.07	0.034			+	-1	HVGCCQSAL	9	41	487.7144036703118	973.4142544074236	2	487.7152099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_HVGCC(Carbamidomethyl (C))QSAL_	REV__ENSG00000122420|ENST00000370757|PTGFR	27.882242232435846	0.5426732730940306	3				NaN	NaN	0	NaN	5172	4122	9294
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9330	28.823	NaN	5019.5	30	0	1382.3	0.142				-1	 	0	57	452.25938664403975	902.5042203548795	2	452.2611999511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5197	4131	9329
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9353	28.878	NaN	4922.8	30	0	658.3	0.214				-1	 	0	62	437.27259564364886	872.5306383540977	2	437.2738952636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5214	4137	9352
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9354	28.881	NaN	1657.1	30	0	233.91	0.106	+			7522	DGRDGAPGAP	10	47	456.71229450866235	911.4100360841247	2	456.7138366699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DGRDGAPGAP_	ENSG00000223953|ENST00000528368|C1QTNF5	40.77816245573522	0.5419747034533848	3				NaN	NaN	0	NaN	5215	4137	9352
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9355	28.883	NaN	1431.5	30	0	1098.8	0.031				-1	 	0	14	343.7185974121094	NaN	0	343.7185974121094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5216	4137	9352
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9366	28.907	NaN	5434.5	30	0	1220.1	0.214			+	6868	CLCLHVPL	8	67	449.2366284288456	896.4587039244913	2	449.2395324707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CLCLHVPL_	REV__ENST00000547685.5_1_12:56231631-56233583:-|nuORF	43.626045697637714	0.6338121648150432	3				NaN	NaN	0	NaN	5224	4140	9365
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9367	28.91	NaN	4033.9	30	0	1494.2	0.034				-1	 	0	56	458.24080187183347	914.467050810467	2	458.2430725097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5225	4140	9365
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9378	28.936	NaN	3374.2	30	0	509.41	0.141				-1	 	0	56	450.2797531610703	898.5449533889406	2	450.78045654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5233	4143	9377
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9400	28.988	NaN	1412.7	30	0	233	0.214	+			35745	SDSTGPREAL	10	47	516.7513063918358	1031.4880598504715	2	516.7530517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SDSTGPREAL_	ENSG00000186814|ENST00000333206|ZSCAN30;nc|ENSG00000186814|Q86W11-3|ZSCAN30	27.047317107675042	0.6589519614906109	3				NaN	NaN	0	NaN	5249	4149	9399
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9401	28.992	NaN	968.01	30	0	222.68	0.036	+			29230	NVYEVVNPK	9	41	531.2860024511632	NaN	0	531.2857055664062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NVYEVVNPK_	ENSG00000139117|ENST00000331366|CPNE8	49.536043120802724	0.20989033510253738	3				NaN	NaN	0	NaN	5250	4149	9399
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9413	29.017	NaN	1533.6	30	0	157.76	0.143	+			11717	FSARVTLAK	9	59	496.7963835886676	991.5782142441352	2	496.7980651855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FSARVTLAK_	ENST00000377424.8_1_1:9129622-9129694:-|nuORF	56.43379154798735	0.2433427591689151	3				NaN	NaN	0	NaN	5259	4152	9412
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9421	29.037	NaN	2179.6	30	0	436.9	0.141			+	7582	DILGNPAPT	9	53	449.2366284288456	896.4587039244913	2	449.2373352050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DILGNPAPT_	REV__tr|U7T652|U7T652_FUSNUHelicaseC-terminaldomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00108PE=4SV=1	52.936696900407355	0.27249468807391813	3				NaN	NaN	0	NaN	5264	4155	9420
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9438	29.082	NaN	1697.3	30	0	169.74	0.214	+			20437	KEVAELTRL	9	51	529.8120385744986	1057.6095242157971	2	529.8154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEVAELTRL_	ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1	68.62578634547417	0.14673074753754126	3				NaN	NaN	0	NaN	5275	4161	9437
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9439	29.085	NaN	1552.3	30	0	174.81	0.034			+	47644	VSAWAQVGL	9	53	465.7558446317859	929.4971363303719	2	465.7572937011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSAWAQVGL_	REV__AMER3|p.G761R|1|0.32|ENSG00000178171|chr2:130764353-130764353|G/A|missense_variant;REV__ENSG00000178171|ENST00000321420|AMER3	45.9519527083369	0.35044536499095585	3				NaN	NaN	0	NaN	5276	4161	9437
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9448	29.106	NaN	4594.8	30	0	1351	0.214				-1	 	0	51	468.27232983405185	934.5301067349037	2	468.27435302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5282	4164	9447
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9449	29.109	NaN	3643.5	30	0	1107.4	0.033				-1	 	0	50	423.25686244892086	844.4991719646417	2	423.25823974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5283	4164	9447
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9461	29.135	NaN	2791.9	30	0	346.14	0.141				-1	 	0	46	430.7567623740893	859.4989718149786	2	430.75811767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5292	4167	9460
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9492	29.212	NaN	10500	30	0	3480.9	0.214				-1	 	0	59	453.2666279408741	904.5187029485483	2	453.26873779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5314	4176	9491
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9493	29.215	NaN	1701.4	30	0	495.54	0.034				-1	 	0	36	463.2873211753747	924.5600894175494	2	463.2896728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5315	4176	9491
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9507	29.251	NaN	2060.4	30	0	483.95	0.214			+	13828	GQRRGLAK	8	48	443.2722437913781	884.5299346495563	2	443.2738342285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GQRRGLAK_	REV__ENSG00000104884|ENST00000391945|ERCC2;REV__ENST00000586441.1_1_19:45867568-45872241:-|nuORF;REV__nc|ENSG00000104884|P18074-2|ERCC2	31.954861631926434	0.7126016770032289	3				NaN	NaN	0	NaN	5323	4182	9506
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9508	29.255	NaN	3600.7	30	0	1035.8	0.106			+	19249	KADKSKTKS	9	66	496.79041707043285	991.5662812076657	2	496.7922668457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KADKSKTKS_	REV__ENSG00000214944|ENST00000513042|ARHGEF28;REV__nc|ENSG00000214944|Q8N1W1-3|ARHGEF28;REV__nc|ENSG00000214944|Q8N1W1-4|ARHGEF28;REV__nc|ENSG00000214944|Q8N1W1-5|ARHGEF28;REV__nc|ENSG00000214944|Q8N1W1-6|ARHGEF28	49.44154591367651	0.3095138337212152	3				NaN	NaN	0	NaN	5324	4182	9506
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9509	29.257	NaN	1554.5	30	0	577.45	0.034	+			12376	GDSLHLVAV	9	47	455.75323813355607	NaN	0	455.75323486328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GDSLHLVAV_	ENST00000563810.1_1_8:41685974-41686286:-|nuORF	33.51558372728122	0.30835390848773375	3				NaN	NaN	0	NaN	5325	4182	9506
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9518	29.278	NaN	1653	30	0	696.56	0.214			+	33117	RENESNSL	8	37	474.7225790092691	947.4306050853382	2	474.7243347167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RENESNSL_	REV__ZDHHC20|p.K91N|1|0.39|ENSG00000180776|chr13:21413749-21413749|C/A|missense_variant	40.77816245573522	0.6514838689002179	3				NaN	NaN	0	NaN	5331	4185	9517
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9519	29.282	NaN	1171.7	30	0	399.7	0.036				-1	VYTTMAEHF	9	36	557.7481698941699	NaN	0	557.748046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_VYTTM(Oxidation (M))AEHF_	ENSG00000117472|ENST00000372003|TSPAN1;TSPAN1|p.T119M|1|0.33|ENSG00000117472|chr1:46184801-46184801|C/T|missense_variant	31.954861631926434	0.3162336699109506	3				NaN	NaN	0	NaN	5332	4185	9517
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9532	29.309	NaN	860.53	30	0	119.51	0.142	+			26993	LYNNEPFA	8	40	484.22879086774674	966.4430288022935	2	484.2307434082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LYNNEPFA_	ENSG00000143093|ENST00000369795|STRIP1;ENST00000473429.5_1_1:110584363-110592127:+|nuORF;ENST00000485775.5_1_1:110582506-110596531:+|nuORF;nc|ENSG00000143093|Q5VSL9-2|STRIP1	26.79610172149135	0.7524337208463756	3				NaN	NaN	0	NaN	5342	4188	9531
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9557	29.376	NaN	3181.9	30	0	776.12	0.143			+	10049	ESEAVGLQR	9	43	494.7569265461374	987.4993001590748	2	494.7583923339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ESEAVGLQR_	REV__ENSG00000011451|ENST00000673675|WIZ;REV__nc|ENSG00000011451|O95785-3|WIZ;REV__nc|ENSG00000011451|O95785-4|WIZ;REV__nc|ENSG00000011451|O95785|WIZ	37.15910966729921	0.4535818937225704	3				NaN	NaN	0	NaN	5358	4197	9556
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9568	29.401	NaN	2661	30	0	1292.4	0.214	+			29042	NTALFQLGSA	10	52	511.2692903375798	1020.5240277419596	2	511.2713623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NTALFQLGSA_	NLRP7|p.A354T|1|0.38|ENSG00000167634|chr19:54939759-54939759|C/T|missense_variant	44.377184641726394	0.5088115166961078	3				NaN	NaN	0	NaN	5366	4200	9567
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9569	29.405	NaN	1456.3	30	0	177.81	0.106	+			37091	SISISVARG	9	43	445.25868122522235	NaN	0	445.2588806152344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SISISVARG_	CON__P04264;ENSG00000167768|ENST00000252244|KRT1	79.71258880314673	0.07236858429579222	3				NaN	NaN	0	NaN	5367	4200	9567
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9570	29.407	NaN	859.28	30	0	271.15	0.033			+	37537	SLLSSGLR	8	31	416.7476440289295	NaN	0	416.74786376953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLLSSGLR_	REV__ENST00000453348.1_1_7:1778531-1778717:-|nuORF	55.50420428727701	1.7418937515398478	3				NaN	NaN	0	NaN	5368	4200	9567
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9582	29.432	NaN	3878.3	30	0	1567.8	0.214			+	50130	WICGVGLLA	9	51	466.25665796576436	930.4987629983287	2	466.25860595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WICGVGLLA_	REV__ENSG00000166573|ENST00000299727|GALR1	49.21078951299608	0.3122205139198386	3				NaN	NaN	0	NaN	5377	4203	9581
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9583	29.436	NaN	1407.7	30	0	522.33	0.035			+	-1	VPNKRACMA	9	49	503.2525898580191	1004.4906267828383	2	503.2542724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_VPNKRACM(Oxidation (M))A_	REV__GPR135|p.W460C|1|0.15|ENSG00000181619|chr14:59463847-59463847|C/A|missense_variant	33.51558372728122	0.4900267029546261	3				NaN	NaN	0	NaN	5378	4203	9581
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9592	29.456	NaN	1362.3	30	0	174.92	0.142	+			6807	CGKLFTQR	8	49	476.75687811383835	951.4992032944767	2	476.7587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CGKLFTQR_	ZNF501|p.F30L|2|0.13|ENSG00000186446|chr3:44734511-44734511|C/A|missense_variant	47.657333605630114	0.6087971902037268	3				NaN	NaN	0	NaN	5384	4206	9591
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9614	29.51	NaN	2512	30	0	599.01	0.143	+			15515	GVCSTLTIK	9	49	489.7666714620569	977.5187899909138	2	489.7686767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GVC(Carbamidomethyl (C))STLTIK_	ENST00000589011.1_1_7:20201474-20224697:-|nuORF	65.46538089061403	0.16805504838372562	3				NaN	NaN	0	NaN	5400	4212	9613
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9626	29.537	NaN	8021	30	0	2178.9	0.142	+			33945	RSARNPNL	8	55	464.25926617518724	926.5039794171745	2	464.2612609863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RSARNPNL_	nc|ENSG00000101974|Q8NB49-3|ATP11C	94.00642277110589	0.2653416297186628	3				NaN	NaN	0	NaN	5409	4215	9625
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9658	29.618	NaN	2229.1	30	0	388.15	0.146	+			16371	HENEDIYKL	9	63	580.7814917505411	1159.5484305678822	2	580.7830200195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HENEDIYKL_	ENSG00000102753|ENST00000261667|KPNA3;ENSG00000186432|ENST00000334256|KPNA4	76.16968421966216	0.11411088698345859	3				NaN	NaN	0	NaN	5432	4224	9657
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9671	29.647	NaN	1450.1	30	0	322.92	0.141			+	23662	LASALGIKA	9	40	422.2687301215941	NaN	0	422.26873779296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LASALGIKA_	REV__ENSG00000145113|ENST00000463781|MUC4;REV__nc|ENSG00000145113|Q99102-10|MUC4;REV__nc|ENSG00000145113|Q99102-12|MUC4;REV__nc|ENSG00000145113|Q99102-13|MUC4;REV__nc|ENSG00000145113|Q99102-17|MUC4;REV__nc|ENSG00000145113|Q99102-3|MUC4	63.30626980617807	0.13521764763214936	3				NaN	NaN	0	NaN	5442	4227	9670
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9694	29.701	NaN	2070.3	30	0	257.24	0.214	+			46065	VCKSGRCI	8	46	461.73333783474857	921.4521227362972	2	461.7352600097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_VCKSGRC(Carbamidomethyl (C))I_	ENSG00000168702|ENST00000389484|LRP1B;LRP1B|p.C2682Vfs*15|1|0.3|ENSG00000168702|chr2:140516994-140516994|A/-|frameshift_variant;LRP1B|p.C3762Lfs*2|1|0.32|ENSG00000168702|chr2:140358089-140358090|-/A|frameshift_variant;LRP1B|p.G4130Mfs*20|1|0.06|ENSG00000168702|chr2:140324019-140324020|-/AT|frameshift_variant;LRP1B|p.H4368Tfs*4|1|0.47|ENSG00000168702|chr2:140274465-140274465|C/-|frameshift_variant;LRP1B|p.I3028Nfs*2|1|0.39|ENSG00000168702|chr2:140492645-140492646|-/T|frameshift_variant;LRP1B|p.K2543Nfs*42|1|0.08|ENSG00000168702|chr2:140536594-140536594|T/-|frameshift_variant;LRP1B|p.N3100Kfs*6|1|0.21|ENSG00000168702|chr2:140485468-140485469|-/T|frameshift_variant;LRP1B|p.N3434Tfs*84|1|0.47|ENSG00000168702|chr2:140442617-140442617|T/-|frameshift_variant;LRP1B|p.N4135Mfs*14|1|0.13|ENSG00000168702|chr2:140324003-140324003|T/-|frameshift_variant;LRP1B|p.R3957Kfs*11|2|0.15|ENSG00000168702|chr2:140350819-140350820|-/T|frameshift_variant;LRP1B|p.T2640Pfs*5|1|0.12|ENSG00000168702|chr2:140525952-140525952|T/-|frameshift_variant;LRP1B|p.Y3120*|1|0.16|ENSG00000168702|chr2:140485402-140485408|AGTAGGG/-|frameshift_variant	71.29570347882199	0.39610197767395533	3				NaN	NaN	0	NaN	5459	4233	9693
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9695	29.705	NaN	712.24	30	0	135.51	0.106	+			26345	LSYTIIQQ	8	34	483.2696658470984	NaN	0	483.2693786621094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSYTIIQQ_	ENSG00000196159|ENST00000394329|FAT4;FAT4|p.A2521Sfs*37|1|0.11|ENSG00000196159|chr4:125448571-125448572|-/G|frameshift_variant;FAT4|p.D3606Sfs*31|1|0.07|ENSG00000196159|chr4:125451831-125451832|-/AGTAAAGG|frameshift_variant;FAT4|p.E3388Gfs*4|1|0.35|ENSG00000196159|chr4:125451179-125451179|A/-|frameshift_variant;FAT4|p.E4539Rfs*31|1|0.12|ENSG00000196159|chr4:125490431-125490431|C/-|frameshift_variant;FAT4|p.K4477Rfs*15|1|0.36|ENSG00000196159|chr4:125490247-125490247|G/-|frameshift_variant;FAT4|p.K4532Efs*21|1|0.37|ENSG00000196159|chr4:125490410-125490411|-/G|frameshift_variant;FAT4|p.K4532Rfs*38|1|0.19|ENSG00000196159|chr4:125490411-125490411|G/-|frameshift_variant;FAT4|p.L3734Ffs*22|1|0.27|ENSG00000196159|chr4:125452211-125452212|-/T|frameshift_variant;FAT4|p.L3734Yfs*8|2|0.3|ENSG00000196159|chr4:125452212-125452212|T/-|frameshift_variant;FAT4|p.Q4906Rfs*14|1|0.49|ENSG00000196159|chr4:125491536-125491536|C/-|frameshift_variant;FAT4|p.T3555Pfs*6|1|0.21|ENSG00000196159|chr4:125451679-125451679|A/-|frameshift_variant;nc|ENSG00000196159|Q6V0I7-3|FAT4;nc|ENSG00000196159|Q6V0I7|FAT4	19.1035232394073	1.7418937515398478	3				NaN	NaN	0	NaN	5460	4233	9693
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9696	29.706	NaN	918.73	30	0	108.19	0.034			+	24026	LEELVRLS	8	37	479.78219680389554	NaN	0	479.7825927734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LEELVRLS_	REV__ENSG00000241973|ENST00000255882|PI4KA;REV__ENST00000485963.5_1_22:21152870-21213097:-|nuORF;REV__PI4KA|p.E1291Kfs*2|1|0.43|ENSG00000241973|chr22:20734425-20734425|G/-|frameshift_variant;REV__PI4KA|p.H1295Pfs*13|1|0.28|ENSG00000241973|chr22:20734411-20734412|-/G|frameshift_variant;REV__PI4KA|p.H1295Tfs*36|2|0.31|ENSG00000241973|chr22:20734412-20734412|G/-|frameshift_variant	51.33545320467046	1.7418937515398478	3				NaN	NaN	0	NaN	5461	4233	9693
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9704	29.725	NaN	6164.2	30	0	2135.6	0.141				-1	 	0	49	439.25918556320994	876.5038181932199	2	439.2609558105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5466	4236	9703
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9737	29.806	NaN	2665.2	30	0	856.7	0.145			+	2954	ASELMDRFH	9	29	369.1745061507971	NaN	0	369.17449951171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASELMDRFH_	REV__ENSG00000187609|ENST00000340951|EXD3;REV__ENST00000487745.5_1_9:140201404-140247406:-|nuORF;REV__ENST00000491734.6_1_9:140201404-140249090:-|nuORF;REV__nc|ENSG00000187609|Q8N9H8-2|EXD3;REV__nc|ENSG00000187609|Q8N9H8-3|EXD3	34.172542307311794	0.30503706118289736	3				NaN	NaN	0	NaN	5490	4245	9736
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9747	29.829	NaN	2967.8	30	0	400.26	0.214				-1	 	0	49	410.7176359672174	819.4207190012348	2	410.71923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5497	4248	9746
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9748	29.833	NaN	1153.5	30	0	580.05	0.035			+	42152	SYSGPYQSL	9	42	501.23208589801277	1000.4496188628256	2	501.23443603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SYSGPYQSL_	REV__ENSG00000042832|ENST00000220616|TG;REV__nc|ENSG00000042832|P01266-2|TG;REV__TG|p.E2744Vfs*20|1|0.07|ENSG00000042832|chr8:133134716-133134717|GG/-|frameshift_variant;REV__TG|p.W2685Gfs*26|2|0.22|ENSG00000042832|chr8:133133520-133133520|C/-|frameshift_variant	26.69291269510374	0.5537881896960711	3				NaN	NaN	0	NaN	5498	4248	9746
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9765	29.876	NaN	1304.2	30	0	173.94	0.143			+	17922	IGKECFQGK	9	55	505.2583911462855	1008.502229359371	2	505.2605285644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IGKECFQGK_	REV__ENST00000554512.1_1_14:50195724-50217770:+|nuORF	51.19269402634007	0.2889735674168909	3				NaN	NaN	0	NaN	5509	4254	9764
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9772	29.896	NaN	3953.9	30	0	852.13	0.214				-1	CPRMRQLA	8	59	495.752248864863	989.4899447965261	2	495.75433349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_CPRM(Oxidation (M))RQLA_	ENST00000382952.7_2_4:1205601-1205772:-|nuORF	42.47446043378293	0.6409579893742323	3				NaN	NaN	0	NaN	5513	4257	9771
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9773	29.899	NaN	1683.6	30	0	390.61	0.106	+			26260	LSSVSTIRN	9	41	488.77684886675354	NaN	0	488.77752685546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSSVSTIRN_	ENSG00000111452|ENST00000261654|ADGRD1;nc|ENSG00000111452|Q6QNK2-2|ADGRD1;nc|ENSG00000111452|Q6QNK2-3|ADGRD1;nc|ENSG00000111452|Q6QNK2-4|ADGRD1	34.172542307311794	0.30503706118289736	3				NaN	NaN	0	NaN	5514	4257	9771
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9774	29.901	NaN	3312.9	30	0	464.04	0.035				-1	 	0	71	505.304094853581	1008.593636773962	2	505.808837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5515	4257	9771
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9795	29.953	NaN	1842.5	30	0	472.49	0.143	+			1932	AISEYIATK	9	44	498.2723918179155	994.530230702631	2	498.7758483886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AISEYIATK_	ENSG00000095002|ENST00000233146|MSH2;MSH2|p.M813Nfs*11|1|0.17|ENSG00000095002|chr2:47478497-47478498|-/A|frameshift_variant;MSH2|p.T806Kfs*4|1|0.2|ENSG00000095002|chr2:47478472-47478478|CACTCAC/-|frameshift_variant;nc|ENSG00000095002|P43246-2|MSH2	56.43379154798735	0.2433427591689151	3				NaN	NaN	0	NaN	5530	4263	9794
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9808	29.982	NaN	3503.7	30	0	974.03	0.214	+			32209	QTAGNVFLK	9	53	489.2731178726989	976.5316828121978	2	489.2742614746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QTAGNVFLK_	ENSG00000120686|ENST00000239878|UFM1;nc|ENSG00000120686|P61960-2|UFM1	54.776311868738084	0.25715957988447635	3				NaN	NaN	0	NaN	5540	4266	9807
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9809	29.985	NaN	3536.9	30	0	419	0.034	+			23762	LCGLRVAIS	9	53	466.2745883460075	930.534623758815	2	466.7774963378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LCGLRVAIS_	ENST00000307564.8_1_9:117129889-117130765:-|nuORF	47.91560031466742	0.327412564698279	3				NaN	NaN	0	NaN	5541	4266	9807
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9820	30.011	NaN	12293	30	0	1898.8	0.214			+	36783	SIAVASWGL	9	63	452.25031476685047	902.486076600501	2	452.2519226074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIAVASWGL_	REV__ENST00000546126.6_1_12:133758239-133761326:+|nuORF	115.45897859103373	0.02394878348088707	3				NaN	NaN	0	NaN	5549	4269	9819
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9821	30.014	NaN	4585.6	30	0	656.36	0.106			+	-1	LLCRTLGV	8	64	466.2745883460075	930.534623758815	2	466.2767639160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LLC(Carbamidomethyl (C))RTLGV_	REV__ENSG00000005189|ENST00000261377|REXO5;REV__ENST00000567297.5_1_16:20818275-20837201:+|nuORF;REV__nc|ENSG00000005189|Q96IC2-2|REXO5	71.37791200682192	0.3954169775488141	3				NaN	NaN	0	NaN	5550	4269	9819
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9822	30.016	NaN	1098.4	30	0	139.03	0.106			+	23027	KVSSKGRS	8	47	424.75163219901	847.48871146482	2	424.75299072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KVSSKGRS_	REV__ZBED9|p.V1067Sfs*7|1|0.08|ENSG00000232040|chr6:28572690-28572691|-/T|frameshift_variant	34.172542307311794	0.6954784234644539	3				NaN	NaN	0	NaN	5551	4269	9819
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9823	30.018	NaN	2314.8	30	0	662.91	0.036			+	11880	FTLCYSTKL	9	60	538.2796497344508	1074.5447465357015	2	538.2828369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FTLCYSTKL_	REV__ENST00000431066.5_1_2:38972277-38975875:-|nuORF;REV__ENST00000443213.5_1_2:38972277-38975875:-|nuORF;REV__ENST00000487773.1_1_2:38972277-38975875:-|nuORF	66.42927471994793	0.16001998865088202	3				NaN	NaN	0	NaN	5552	4269	9819
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9836	30.045	NaN	4499.9	30	0	1902.4	0.214			+	-1	AMRMRSAPM	9	48	533.7509905388595	1065.4874281445188	2	533.7531127929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_AMRMRSAPM(Oxidation (M))_	REV__ENST00000329021.9_1_22:42781096-42793874:-|nuORF	21.9598887501803	0.5980208138527809	3				NaN	NaN	0	NaN	5562	4272	9835
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9837	30.048	NaN	1647.1	30	0	965.8	0.03				-1	 	0	25	336.22627629826786	670.4379996633357	2	336.22784423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5563	4272	9835
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9848	30.074	NaN	3112.4	30	0	1840.9	0.145	+			40736	SVCVLDLRK	9	34	363.87307131959585	1088.5973845589876	3	363.8741149902344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SVC(Carbamidomethyl (C))VLDLRK_	ENSG00000101849|ENST00000645353|TBL1X;ENSG00000177565|ENST00000457928|TBL1XR1;nc|ENSG00000101849|O60907-2|TBL1X;TBL1X|p.G568S|1|0.45|ENSG00000101849|chrX:9714998-9714998|G/A|missense_variant	63.53385203322761	0.18415635464017938	3				NaN	NaN	0	NaN	5571	4275	9847
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9882	30.165	NaN	1858.5	30	0	532.27	0.142	+			860	AEGTVVMKL	9	49	482.26127607871143	962.5079992242229	2	482.26300048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_AEGTVVM(Oxidation (M))KL_	ENSG00000141013|ENST00000268699|GAS8;ENST00000540721.5_1_16:90089090-90108732:+|nuORF;ENST00000565062.5_1_16:90097706-90103159:+|nuORF;nc|ENSG00000141013|O95995-2|GAS8	60.11826168202944	0.21262886028301267	3				NaN	NaN	0	NaN	5593	4287	9881
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9925	30.273	NaN	3507.9	30	0	1219.6	0.214	+			9004	EGAAKLLW	8	39	444.25311419534864	886.4916754574973	2	444.2549133300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EGAAKLLW_	ENSG00000163938|ENST00000418458|GNL3;ENST00000497356.1_1_3:52727208-52727346:+|nuORF;nc|ENSG00000163938|Q9BVP2-2|GNL3	40.5726180659479	0.6527593143185008	3				NaN	NaN	0	NaN	5624	4299	9924
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9926	30.277	NaN	2693.4	30	0	1335.9	0.106	+			18934	IVNDFAYMKK	10	39	410.2180058185741	NaN	0	410.2178649902344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IVNDFAYMKK_	ENSG00000170348|ENST00000303575|TMED10;ENST00000534816.1_1_8:146220430-146220868:+|nuORF;ENST00000555036.1_1_14:75602424-75614456:-|nuORF;ENST00000555873.1_1_14:75601590-75605782:-|nuORF;ENST00000556969.5_1_14:75601590-75614465:-|nuORF	42.33807565288922	0.3540422799631949	3				NaN	NaN	0	NaN	5625	4299	9924
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9927	30.279	NaN	1927.9	30	0	506.21	0.106	+			37905	SPATTSHGNA	10	47	471.7190293347154	941.4235057362308	2	471.72064208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SPATTSHGNA_	ENSG00000129226|ENST00000250092|CD68;ENST00000581621.1_1_17:7483060-7484826:+|nuORF;nc|ENSG00000129226|P34810-3|CD68	44.377184641726394	0.5088115166961078	3				NaN	NaN	0	NaN	5626	4299	9924
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9928	30.281	NaN	3463	30	0	1436.7	0.106				-1	 	0	45	451.2876963324322	900.5608397316644	2	451.2899475097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5627	4299	9924
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9929	30.282	NaN	628.57	30	0	95.494	0.035			+	46794	VHLNKRSR	8	41	505.304094853581	1008.593636773962	2	505.306884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VHLNKRSR_	REV__DNAH8|p.D4227Afs*7|1|0.04|ENSG00000124721|chr6:39008929-39008930|-/CAGTGTT|frameshift_variant;REV__DNAH8|p.Q3444Rfs*16|1|0.31|ENSG00000124721|chr6:38926073-38926073|C/-|frameshift_variant;REV__DNAH8|p.V3263Sfs*23|1|0.16|ENSG00000124721|chr6:38918047-38918048|-/A|frameshift_variant;REV__DNAH8|p.V3263Sfs*28|1|0.47|ENSG00000124721|chr6:38918048-38918048|A/-|frameshift_variant;REV__ENSG00000124721|ENST00000327475|DNAH8;REV__nc|ENSG00000124721|Q96JB1-2|DNAH8;REV__nc|ENSG00000124721|Q96JB1|DNAH8	28.2542754592877	0.7411748056684583	3				NaN	NaN	0	NaN	5628	4299	9924
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9941	30.308	NaN	97383	30	0	29507	0.147				-1	 	0	79	415.2368338235083	1242.6886720707248	3	415.23870849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5637	4302	9940
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9955	30.34	NaN	8445.4	30	0	1108	0.214	+			33918	RRTNQLQR	8	60	536.3094485038475	1070.604344074495	2	536.3119506835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RRTNQLQR_	ENST00000417647.6_1_5:140032665-140033557:+|nuORF	71.87747018426188	0.391254423828572	3				NaN	NaN	0	NaN	5648	4305	9954
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9956	30.343	NaN	2590.3	30	0	859.76	0.106			+	2801	ARTCLLFVFR	10	40	409.2333677803375	1224.6782739412126	3	409.2341613769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ARTCLLFVFR_	REV__CHD6|p.I2312Sfs*13|1|0.15|ENSG00000124177|chr20:41415191-41415191|T/-|frameshift_variant;REV__CHD7|p.D2988Mfs*3|5|0.36|ENSG00000171316|chr8:60865895-60865895|G/-|frameshift_variant;REV__CHD7|p.G2228Lfs*52|1|0.03|ENSG00000171316|chr8:60853406-60853407|-/TTGCCTTC|frameshift_variant;REV__CHD7|p.N2588Ifs*4|1|0.14|ENSG00000171316|chr8:60861054-60861054|A/-|frameshift_variant;REV__CHD8|p.D1870Rfs*3|1|0.3|ENSG00000100888|chr14:21394187-21394188|-/G|frameshift_variant;REV__CHD8|p.L1905Ffs*30|2|0.29|ENSG00000100888|chr14:21394082-21394082|G/-|frameshift_variant;REV__CHD8|p.N2371Ifs*6|1|0.32|ENSG00000100888|chr14:21391017-21391017|T/-|frameshift_variant;REV__CHD8|p.N2371Kfs*2|2|0.24|ENSG00000100888|chr14:21391016-21391017|-/T|frameshift_variant;REV__CHD8|p.V1538*|1|0.4|ENSG00000100888|chr14:21400267-21400267|T/-|frameshift_variant;REV__CHD9|p.M2707Tfs*40|1|0.1|ENSG00000177200|chr16:53324320-53324321|-/C|frameshift_variant;REV__CHD9|p.N1798Tfs*17|1|0.12|ENSG00000177200|chr16:53292931-53292931|A/-|frameshift_variant;REV__CHD9|p.R2541Kfs*9|1|0.11|ENSG00000177200|chr16:53318242-53318243|-/A|frameshift_variant;REV__CHD9|p.R2632Dfs*28|1|0.35|ENSG00000177200|chr16:53324090-53324090|G/-|frameshift_variant;REV__ENSG00000100888|ENST00000646647|CHD8;REV__ENSG00000124177|ENST00000373233|CHD6;REV__ENSG00000171316|ENST00000423902|CHD7;REV__ENSG00000177200|ENST00000447540|CHD9;REV__ENST00000476641.2_1_20:40101874-40113142:-|nuORF;REV__ENST00000565119.1_1_16:53279647-53284265:+|nuORF;REV__nc|ENSG00000100888|Q9HCK8-2|CHD8;REV__nc|ENSG00000177200|Q3L8U1-2|CHD9;REV__nc|ENSG00000177200|Q3L8U1-3|CHD9	20.83715455343099	0.7096666582730032	3				NaN	NaN	0	NaN	5649	4305	9954
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9957	30.345	NaN	3403.4	30	0	307.45	0.106	+			17546	IDSTVGEHR	9	61	507.2544224238526	1012.4942919145052	2	507.2562561035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IDSTVGEHR_	ENSG00000058668|ENST00000357681|ATP2B4;nc|ENSG00000058668|P23634-2|ATP2B4;nc|ENSG00000058668|P23634-3|ATP2B4;nc|ENSG00000058668|P23634-4|ATP2B4;nc|ENSG00000058668|P23634-5|ATP2B4;nc|ENSG00000058668|P23634-7|ATP2B4;nc|ENSG00000058668|P23634-8|ATP2B4;nc|ENSG00000058668|P23634|ATP2B4	49.44154591367651	0.3095138337212152	3				NaN	NaN	0	NaN	5650	4305	9954
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9958	30.347	NaN	2456	30	0	257.34	0.106	+			42326	TAGDGLIELRK	11	66	586.8333576752104	1171.6521624172208	2	586.8350830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TAGDGLIELRK_	ENSG00000167085|ENST00000300408|PHB1	84.81729255234993	0.11999117121320589	3				NaN	NaN	0	NaN	5651	4305	9954
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9959	30.349	NaN	1052.7	30	0	172.63	0.106	+			44742	TTMDLPVSK	9	41	496.25823420744797	990.501915481696	2	496.25933837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TTMDLPVSK_	RGS5|p.P30Ffs*54|1|0.05|ENSG00000143248|chr1:163168325-163168326|-/AA|frameshift_variant;RGS5|p.P30Lfs*54|1|0.05|ENSG00000143248|chr1:163168324-163168325|-/TA|frameshift_variant	44.377184641726394	0.36891676396732553	3				NaN	NaN	0	NaN	5652	4305	9954
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9960	30.351	NaN	1191	30	0	136.64	0.106			+	43587	TIGVPRPTI	9	53	477.29446191733234	952.5743709014647	2	477.2957763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TIGVPRPTI_	REV__ENSG00000215277|ENST00000430154|RNF212B	42.396135135203025	0.392153681582562	3				NaN	NaN	0	NaN	5653	4305	9954
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9961	30.352	NaN	607.16	30	0	71.465	0.034	+			27657	MPSISSDRA	9	44	482.2323206573083	962.4500883814167	2	482.233154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MPSISSDRA_	ENSG00000106689|ENST00000373615|LHX2	37.81151784470057	0.4459294069877048	3				NaN	NaN	0	NaN	5654	4305	9954
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9973	30.377	NaN	4306.3	30	0	1534.7	0.214	+			35640	SCIIQSILDS	10	60	539.7771523787977	1077.5397518243954	2	539.7799682617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SCIIQSILDS_	ENSG00000254685|ENST00000370898|FPGT;nc|ENSG00000254685|O14772-2|FPGT;nc|ENSG00000254685|O14772|FPGT	27.882242232435846	0.6521336255503853	3				NaN	NaN	0	NaN	5663	4308	9972
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9974	30.381	NaN	1247.9	30	0	428.41	0.106			+	18861	IVFLAPAGW	9	38	487.27995271687416	972.5453525005483	2	487.281982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IVFLAPAGW_	REV__ENSG00000010310|ENST00000590918|GIPR;REV__nc|ENSG00000010310|P48546-2|GIPR;REV__nc|ENSG00000010310|P48546-3|GIPR	29.14955571784316	0.5308295550522326	3				NaN	NaN	0	NaN	5664	4308	9972
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9975	30.383	NaN	1002.9	30	0	118.85	0.106	+			37504	SLLETLNGQRL	11	48	622.3518870733972	1242.6892212135942	2	622.3545532226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLLETLNGQRL_	ENSG00000119574|ENST00000594051|ZBTB45	39.873155843976775	0.5596786644756743	3				NaN	NaN	0	NaN	5665	4308	9972
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9976	30.385	NaN	1424.7	30	0	318.71	0.106	+			4805	ATNSSMFLK	9	49	499.752982888209	NaN	0	499.7528076171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATNSSMFLK_	COG5|p.K795Rfs*18|1|0.42|ENSG00000164597|chr7:107210547-107210547|T/-|frameshift_variant;ENSG00000164597|ENST00000297135|COG5;nc|ENSG00000164597|Q9UP83-1|COG5;nc|ENSG00000164597|Q9UP83-3|COG5;nc|ENSG00000164597|Q9UP83|COG5	56.43379154798735	0.16452882468284893	3				NaN	NaN	0	NaN	5666	4308	9972
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9977	30.387	NaN	2314.5	30	0	509.59	0.106			+	34620	RVQAGAPFC	9	49	474.74091096860064	947.4672690040013	2	474.7422180175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RVQAGAPFC_	REV__ENSG00000163501|ENST00000295731|IHH;REV__IHH|p.E379Rfs*18|2|0.25|ENSG00000163501|chr2:219055308-219055308|C/-|frameshift_variant;REV__IHH|p.P266Hfs*99|2|0.37|ENSG00000163501|chr2:219055646-219055646|G/-|frameshift_variant;REV__IHH|p.Q386Sfs*11|1|0.4|ENSG00000163501|chr2:219055287-219055287|G/-|frameshift_variant;REV__IHH|p.R253*|1|0.66|ENSG00000163501|chr2:219055683-219055686|GCCT/-|frameshift_variant	33.51558372728122	0.4900267029546261	3				NaN	NaN	0	NaN	5667	4308	9972
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9978	30.388	NaN	966.7	30	0	432.78	0.038				-1	ATGRMVRRLP	10	28	391.5598449707031	NaN	0	391.5598449707031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_ATGRM(Oxidation (M))VRRLP_	ENST00000468303.5_1_1:24741845-24742094:-|nuORF	15.333111300571575	0.4201028297492154	3				NaN	NaN	0	NaN	5668	4308	9972
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9989	30.414	NaN	3715.8	30	0	387.48	0.214				-1	 	0	55	498.25421191244897	994.493870891698	2	498.2560729980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5676	4311	9988
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9990	30.417	NaN	1515.6	30	0	634.54	0.034	+			27082	MALISVPW	8	44	458.7511502481864	915.4877475631728	2	458.7528991699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MALISVPW_	ENSG00000105929|ENST00000310018|ATP6V0A4	23.036711822280957	0.7814608874307191	3				NaN	NaN	0	NaN	5677	4311	9988
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10001	30.442	NaN	11433	30	0	1431	0.214			+	19542	KCFSTIIAL	9	76	498.28380280381447	994.553052674429	2	498.2853088378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KCFSTIIAL_	REV__ENSG00000141068|ENST00000644974|KSR1;REV__nc|ENSG00000141068|Q8IVT5-2|KSR1;REV__nc|ENSG00000141068|Q8IVT5-3|KSR1;REV__nc|ENSG00000141068|Q8IVT5-4|KSR1;REV__nc|ENSG00000141068|Q8IVT5|KSR1	32.81241826257853	0.4965981579233955	3				NaN	NaN	0	NaN	5685	4314	10000
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10002	30.446	NaN	2162.5	30	0	421.95	0.106				-1	 	0	53	473.7618417322164	945.5091305312328	2	473.76373291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5686	4314	10000
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10003	30.448	NaN	1428.5	30	0	571.16	0.035				-1	LRCNHSIQ	8	51	514.259914162979	1026.505275392758	2	514.2617797851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LRC(Carbamidomethyl (C))NHSIQ_	ENSG00000148357|ENST00000683500|HMCN2;HMCN2|p.P4784Qfs*22|1|0.32|ENSG00000148357|chr9:130430363-130430363|C/-|frameshift_variant;nc|ENSG00000148357|Q8NDA2-1|HMCN2	54.776311868738084	0.5534952410049249	3				NaN	NaN	0	NaN	5687	4314	10000
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10014	30.473	NaN	1657.6	30	0	433.26	0.142	+			24371	LFRCAASF	8	44	457.73239605170056	913.4502391702011	2	457.734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LFRCAASF_	ENST00000305963.2_1_X:135053232-135055898:-|nuORF	45.9519527083369	0.6193794311207887	3				NaN	NaN	0	NaN	5695	4317	10013
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10026	30.5	NaN	2600.8	30	0	535.29	0.143	+			25543	LPVDKAQEL	9	61	506.78564536499294	1011.5567377967859	2	506.7878723144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LPVDKAQEL_	ENSG00000196497|ENST00000354464|IPO4;ENST00000558780.5_2_14:24649650-24651621:-|nuORF;nc|ENSG00000196497|Q8TEX9-2|IPO4	60.11826168202944	0.21262886028301267	3				NaN	NaN	0	NaN	5704	4320	10025
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10041	30.533	NaN	1771.2	30	0	210.18	0.143			+	32770	RARGARAVR	9	60	506.8176724918754	NaN	0	506.787841796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RARGARAVR_	REV__ENST00000603791.1_1_6:3751774-3752740:+|nuORF	37.15910966729921	0.2899585034171616	3				NaN	NaN	0	NaN	5716	4323	10040
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10052	30.56	NaN	8719.7	30	0	2317.3	0.141				-1	 	0	66	422.2671924223161	842.5198319114322	2	422.268310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5724	4326	10051
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10063	30.587	NaN	1039.1	30	0	135.84	0.214	+			34711	RVVEGRLLA	9	43	506.8170471191406	NaN	0	506.8170471191406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVVEGRLLA_	ENST00000529590.5_1_11:68034666-68035676:-|nuORF	35.61828744233558	0.29773779453147337	3				NaN	NaN	0	NaN	5732	4329	10062
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10064	30.59	NaN	1174	30	0	477.49	0.034			+	6767	CEQAGRVGL	9	44	466.73556890493904	931.4565848766781	2	466.73736572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_CEQAGRVGL_	REV__ENST00000328070.10_1_19:57134131-57134404:+|nuORF	39.252832667884924	0.4290233611298554	3				NaN	NaN	0	NaN	5733	4329	10062
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10076	30.615	NaN	1920.5	30	0	420.07	0.214			+	39880	STLPQNFL	8	40	460.2476543748575	918.480755816515	2	460.24969482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STLPQNFL_	REV__ENSG00000138386|ENST00000337386|NAB1;REV__NAB1|p.A182Rfs*34|1|0.39|ENSG00000138386|chr2:190659715-190659715|C/-|frameshift_variant;REV__nc|ENSG00000138386|Q13506-2|NAB1	40.5726180659479	0.6527593143185008	3				NaN	NaN	0	NaN	5742	4332	10075
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10077	30.619	NaN	1680.8	30	0	467.18	0.037				-1	CGKILGTVRC	10	36	582.3066832167739	NaN	0	582.306884765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))GKILGTVRC(Carbamidomethyl (C))_	ZNF473|p.F384Lfs*35|1|0.08|ENSG00000142528|chr19:50045591-50045591|T/-|frameshift_variant	15.641811463095205	0.4201028297492154	3				NaN	NaN	0	NaN	5743	4332	10075
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10104	30.689	NaN	3919	30	0	1600.3	0.14				-1	 	0	37	413.26197912201377	824.5094053108276	2	413.26348876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5761	4341	10103
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10125	30.741	NaN	2338.6	30	0	416.4	0.142	+			6314	AVTDAIMSR	9	56	482.24974448995056	NaN	0	482.2499084472656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVTDAIMSR_	ENSG00000162298|ENST00000377190|SYVN1;ENST00000449943.5_1_11:64897669-64899838:-|nuORF;nc|ENSG00000162298|Q86TM6-2|SYVN1;nc|ENSG00000162298|Q86TM6-3|SYVN1;SYVN1|p.N368Qfs*129|1|0.33|ENSG00000162298|chr11:65130663-65130664|-/G|frameshift_variant;SYVN1|p.N368Tfs*117|1|0.4|ENSG00000162298|chr11:65130664-65130664|G/-|frameshift_variant	72.87924865735499	0.09578366712754152	3				NaN	NaN	0	NaN	5776	4347	10124
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10139	30.772	NaN	43820	30	0	19165	0.214				-1	 	0	55	364.5437893916765	1090.6095387752296	3	364.5451965332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5787	4350	10138
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10140	30.776	NaN	4024.2	30	0	1435.5	0.106	+			22205	KSTQGRSK	8	60	446.2543195941061	890.4940862550122	2	446.2562561035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KSTQGRSK_	nc|ENSG00000284609|Q8NGG8|OR8B3;nc|ENSG00000284680|Q96RD0|OR8B2	47.91560031466742	0.6071945918984287	3				NaN	NaN	0	NaN	5788	4350	10138
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10141	30.778	NaN	3149.8	30	0	515.31	0.034	+			3684	ASYVSPVLK	9	57	482.2774151585253	962.5402773838506	2	482.2798156738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASYVSPVLK_	ENSG00000160613|ENST00000320934|PCSK7;ENST00000533135.1_1_11:117079739-117089787:-|nuORF;ENST00000534529.5_1_11:117078449-117094061:-|nuORF;PCSK7|p.N663Tfs*9|1|0.18|ENSG00000160613|chr11:117206693-117206693|G/-|frameshift_variant;PCSK7|p.R560Afs*51|1|0.18|ENSG00000160613|chr11:117208910-117208910|G/-|frameshift_variant	62.107414245175825	0.1960472003779324	3				NaN	NaN	0	NaN	5789	4350	10138
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10152	30.803	NaN	2337.7	30	0	481.05	0.214	+			43984	TPGGTRIIY	9	60	489.2729220304903	976.5312911277806	2	489.27423095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TPGGTRIIY_	ENSG00000148730|ENST00000373218|EIF4EBP2;ENSG00000187840|ENST00000338825|EIF4EBP1;ENSG00000243056|ENST00000310331|EIF4EBP3	75.04331003522576	0.118981335847003	3				NaN	NaN	0	NaN	5797	4353	10151
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10153	30.807	NaN	1499.2	30	0	215.32	0.106			+	33142	RERSKETAG	9	50	517.2716174164334	1032.5286818996667	2	517.2740478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RERSKETAG_	REV__ENSG00000160191|ENST00000291539|PDE9A;REV__ENST00000470987.5_1_21:44117526-44195400:+|nuORF;REV__ENST00000489319.5_1_21:44178904-44195400:+|nuORF;REV__nc|ENSG00000160191|O76083-10|PDE9A;REV__nc|ENSG00000160191|O76083-11|PDE9A;REV__nc|ENSG00000160191|O76083-12|PDE9A;REV__nc|ENSG00000160191|O76083-13|PDE9A;REV__nc|ENSG00000160191|O76083-14|PDE9A;REV__nc|ENSG00000160191|O76083-15|PDE9A;REV__nc|ENSG00000160191|O76083-16|PDE9A;REV__nc|ENSG00000160191|O76083-2|PDE9A;REV__nc|ENSG00000160191|O76083-3|PDE9A;REV__nc|ENSG00000160191|O76083-4|PDE9A;REV__nc|ENSG00000160191|O76083-5|PDE9A;REV__nc|ENSG00000160191|O76083-6|PDE9A;REV__nc|ENSG00000160191|O76083-7|PDE9A;REV__nc|ENSG00000160191|O76083-8|PDE9A;REV__nc|ENSG00000160191|O76083-9|PDE9A;REV__PDE9A|p.S582Efs*5|1|0.46|ENSG00000160191|chr21:42772486-42772487|-/AG|frameshift_variant	58.78195531508484	0.22376836668196862	3				NaN	NaN	0	NaN	5798	4353	10151
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10154	30.809	NaN	1372	30	0	112.19	0.035				-1	 	0	52	504.27235609067674	1006.5301592481535	2	504.2738952636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5799	4353	10151
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10168	30.838	NaN	9778.4	30	0	3598.8	0.214	+			41528	SVPVWGFK	8	59	460.25608082535825	918.4976087175165	2	460.2581787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVPVWGFK_	ENSG00000204673|ENST00000344175|AKT1S1;nc|ENSG00000204673|Q96B36-2|AKT1S1;nc|ENSG00000204673|Q96B36-3|AKT1S1	38.80614096846853	0.6637206697844082	3				NaN	NaN	0	NaN	5810	4356	10167
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10169	30.842	NaN	1531.5	30	0	333.92	0.036				-1	LSMLNGTKVL	10	48	546.3116801793199	1090.6088074254396	2	546.3143310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LSM(Oxidation (M))LNGTKVL_	ENSG00000166024|ENST00000298999|R3HCC1L;nc|ENSG00000166024|Q7Z5L2-2|R3HCC1L;nc|ENSG00000166024|Q7Z5L2|R3HCC1L;R3HCC1L|p.E618Rfs*66|1|0.43|ENSG00000166024|chr10:98231535-98231535|A/-|frameshift_variant	51.19269402634007	0.44601001148513897	3				NaN	NaN	0	NaN	5811	4356	10167
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10180	30.867	NaN	953.19	30	0	100.5	0.214			+	-1	RCLGACGPM	9	37	511.2235932140079	NaN	0	511.2234191894531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_RC(Carbamidomethyl (C))LGAC(Carbamidomethyl (C))GPM_	REV__ENST00000374866.7_1_2:189968999-189975048:-|nuORF	25.450171626174864	0.34907449758287085	3				NaN	NaN	0	NaN	5819	4359	10179
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10181	30.87	NaN	2047.3	30	0	530.82	0.106	+			43992	TPGSELLI	8	44	415.23867975083755	NaN	0	415.2384948730469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TPGSELLI_	ENSG00000197879|ENST00000648651|MYO1C;nc|ENSG00000197879|O00159-2|MYO1C;nc|ENSG00000197879|O00159-3|MYO1C	39.021493756699265	1.7418937515398478	3				NaN	NaN	0	NaN	5820	4359	10179
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10182	30.872	NaN	2463.4	30	0	833.65	0.038			+	-1	ATKVRPKCCV	10	43	387.88123941655806	NaN	0	388.2164306640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_ATKVRPKC(Carbamidomethyl (C))CV_	REV__ENST00000447724.1_1_3:48342161-48342203:-|nuORF	36.446750945000026	0.3805027428805705	3				NaN	NaN	0	NaN	5821	4359	10179
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10224	30.977	NaN	1388.1	30	0	474.95	0.214	+			9135	EGLNITKL	8	30	444.2635329541155	NaN	0	444.26361083984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EGLNITKL_	ENSG00000229453|ENST00000434006|SPINK8	39.252832667884924	1.7418937515398478	3				NaN	NaN	0	NaN	5851	4371	10223
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10225	30.98	NaN	3375.4	30	0	1179.3	0.106	+			25699	LRKSTRNT	8	51	488.28821999399213	974.5618870547843	2	488.28985595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LRKSTRNT_	ENSG00000129534|ENST00000310806|MIS18BP1;MIS18BP1|p.K1063Nfs*18|1|0.14|ENSG00000129534|chr14:45206134-45206134|T/-|frameshift_variant;MIS18BP1|p.S991Nfs*17|1|0.35|ENSG00000129534|chr14:45217046-45217050|TGTAC/-|frameshift_variant;MIS18BP1|p.V839Sfs*20|1|0.14|ENSG00000129534|chr14:45224073-45224073|G/-|frameshift_variant	37.15910966729921	0.6739408393984688	3				NaN	NaN	0	NaN	5852	4371	10223
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10226	30.982	NaN	2910.7	30	0	366.89	0.106			+	8535	EAVFQTLVQ	9	67	517.7794388053054	1033.5443246774107	2	517.781982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EAVFQTLVQ_	REV__TMEM132D|p.R578Q|1|0.45|ENSG00000151952|chr12:129081949-129081949|C/T|missense_variant	69.6276240434122	0.14239879520340665	3				NaN	NaN	0	NaN	5853	4371	10223
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10227	30.984	NaN	1920.6	30	0	234.25	0.035	+			32834	RCLSQLLLA	9	53	508.8013627629069	1015.5881725926138	2	508.8027038574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RCLSQLLLA_	ENSG00000179715|ENST00000546455|PCED1B	64.20726635412375	0.17854274437659667	3				NaN	NaN	0	NaN	5854	4371	10223
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10248	31.033	NaN	9592.4	30	0	3477	0.142				-1	 	0	58	485.26431333825576	968.5140737433115	2	485.768798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5869	4377	10247
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10259	31.058	NaN	1798.2	30	0	141.16	0.142	+			2501	APSVVKVSY	9	56	475.27024882016434	948.5259447071287	2	475.271240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_APSVVKVSY_	ENSG00000127616|ENST00000344626|SMARCA4;ENST00000592604.5_1_19:11123597-11172489:+|nuORF;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;nc|ENSG00000127616|P51532-5|SMARCA4;SMARCA4|p.G1136Afs*4|1|0.27|ENSG00000127616|chr19:11030751-11030751|G/-|frameshift_variant;SMARCA4|p.P1453Lfs*10|1|0.31|ENSG00000127616|chr19:11041491-11041491|C/-|frameshift_variant	104.0567914643314	0.03506238181059741	3				NaN	NaN	0	NaN	5877	4380	10258
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10272	31.087	NaN	10706	30	0	4468.6	0.214	+			24534	LGLGGSPV	8	35	350.20554648217444	698.3965400311489	2	350.2066955566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LGLGGSPV_	ENSG00000178297|ENST00000696167|TMPRSS9;nc|ENSG00000178297|Q7Z410|TMPRSS9	23.036711822280957	0.7814608874307191	3				NaN	NaN	0	NaN	5887	4383	10271
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10273	31.091	NaN	896.69	30	0	164.2	0.034			+	7146	DAEAKFIPA	9	45	481.2550259237214	NaN	0	481.2549133300781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DAEAKFIPA_	REV__tr|U7T5S3|U7T5S3_FUSNUPTSsystem,fructose-specificIICcomponentOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00064PE=4SV=1	39.252832667884924	0.27938773122138094	3				NaN	NaN	0	NaN	5888	4383	10271
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10282	31.111	NaN	2558.1	30	0	1561.8	0.145				-1	SLMVPLLFGV	10	30	364.5437893916765	1090.6095387752296	3	364.5452880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_SLM(Oxidation (M))VPLLFGV_	ENST00000306917.4_1_15:68570981-68582015:+|nuORF	21.68575002086885	0.7027366847906487	3				NaN	NaN	0	NaN	5894	4386	10281
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10290	31.131	NaN	2883.7	30	0	381.06	0.142			+	21821	KREPCLAH	8	48	477.25392456026134	952.4932961873227	2	477.2555847167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KREPCLAH_	REV__ENSG00000188315|ENST00000343010|C3orf62	68.484700416344	0.4195245774506064	3				NaN	NaN	0	NaN	5899	4389	10289
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10302	31.158	NaN	862.84	30	0	136.22	0.143	+			24440	LGDGEVFFL	9	48	498.7561438415328	995.4977347498656	2	498.7582092285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LGDGEVFFL_	ARHGAP10|p.P593Qfs*55|1|0.39|ENSG00000071205|chr4:148023320-148023320|C/-|frameshift_variant;ENSG00000071205|ENST00000336498|ARHGAP10	24.20275056022122	0.577060078256802	3				NaN	NaN	0	NaN	5908	4392	10301
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10317	31.191	NaN	1233.7	30	0	396.59	0.214				-1	 	0	35	421.2593074156124	840.5040618980248	2	421.2602844238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5920	4395	10316
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10318	31.195	NaN	612.33	30	0	86.266	0.038	+			33110	REMDEQIRL	9	33	595.3019409179688	NaN	0	595.3019409179688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_REMDEQIRL_	ENST00000413233.1_1_7:116612221-116612569:-|nuORF;ENST00000600996.1_1_19:42012510-42012810:+|nuORF;nc|ENSG00000143549|P06753-2|TPM3;nc|ENSG00000143549|P06753-3|TPM3;nc|ENSG00000143549|P06753-6|TPM3	22.579656572578934	0.3605601358598771	3				NaN	NaN	0	NaN	5921	4395	10316
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10340	31.246	NaN	4279.5	30	0	811.37	0.214	+			46089	VDAAYFINT	9	65	507.25048647560527	1012.4864200180106	2	507.2528381347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VDAAYFINT_	ENSG00000159337|ENST00000290472|PLA2G4D;nc|ENSG00000159337|Q86XP0-2|PLA2G4D	58.78195531508484	0.22376836668196862	3				NaN	NaN	0	NaN	5937	4401	10339
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10341	31.249	NaN	3556.5	30	0	365.16	0.034				-1	 	0	54	462.77732989815036	923.5401068631007	2	462.779541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5938	4401	10339
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10363	31.301	NaN	1579.2	30	0	185.72	0.214	+			46506	VEVEKESVL	9	52	516.28554552854	NaN	0	516.284912109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VEVEKESVL_	ENSG00000156017|ENST00000376834|CARNMT1	79.71258880314673	0.07236858429579222	3				NaN	NaN	0	NaN	5954	4407	10362
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10364	31.305	NaN	3384.4	30	0	1496.9	0.106	+			36693	SGQRKQNTA	9	40	495.2597457810176	988.5049386288352	2	495.7624816894531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SGQRKQNTA_	ENST00000374212.4_1_9:116024667-116024982:+|nuORF	21.9598887501803	0.5980208138527809	3				NaN	NaN	0	NaN	5955	4407	10362
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10365	31.307	NaN	1192.1	30	0	140.24	0.035	+			26216	LSSINAIMK	9	54	488.7766345420033	975.5387161508066	2	488.77801513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSSINAIMK_	ENSG00000188738|ENST00000424728|FSIP2;FSIP2|p.D5579Mfs*10|1|0.09|ENSG00000188738|chr2:185806029-185806029|A/-|frameshift_variant;FSIP2|p.K6152Rfs*27|1|0.43|ENSG00000188738|chr2:185807758-185807758|A/-|frameshift_variant;FSIP2|p.K6528Nfs*5|1|0.33|ENSG00000188738|chr2:185808884-185808884|A/-|frameshift_variant;FSIP2|p.V5491I|1|0.42|ENSG00000188738|chr2:185805777-185805777|G/A|missense_variant;FSIP2|p.V5734Yfs*24|2|0.23|ENSG00000188738|chr2:185806499-185806499|A/-|frameshift_variant;FSIP2|p.V6322*|1|0.42|ENSG00000188738|chr2:185808265-185808265|A/-|frameshift_variant	45.97224482568171	0.3502073465782774	3				NaN	NaN	0	NaN	5956	4407	10362
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10372	31.323	NaN	935.72	30	0	409.64	0.142			+	8513	EATLGNIEL	9	31	480.2544499763642	958.4943470195284	2	480.2564392089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EATLGNIEL_	REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-10|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-13|TTN;REV__nc|ENSG00000155657|Q8WZ42-2|TTN;REV__nc|ENSG00000155657|Q8WZ42-3|TTN;REV__nc|ENSG00000155657|Q8WZ42-4|TTN;REV__nc|ENSG00000155657|Q8WZ42-5|TTN;REV__nc|ENSG00000155657|Q8WZ42-7|TTN;REV__nc|ENSG00000155657|Q8WZ42-8|TTN;REV__nc|ENSG00000155657|Q8WZ42-9|TTN;REV__nc|ENSG00000155657|Q8WZ42|TTN;REV__TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;REV__TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;REV__TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;REV__TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;REV__TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;REV__TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant;REV__TTN|p.V27442Cfs*4|1|0.05|ENSG00000155657|chr2:178558107-178558108|-/A|frameshift_variant	20.94693142431847	0.6074874384046576	3				NaN	NaN	0	NaN	5960	4410	10371
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10389	31.369	NaN	1303.4	30	0	258.79	0.214	+			22031	KSIDFPLTK	9	52	524.8036911079083	1047.5928292826165	2	524.8064575195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSIDFPLTK_	ENSG00000084073|ENST00000372759|ZMPSTE24	66.9202029811203	0.15592758990009112	3				NaN	NaN	0	NaN	5971	4416	10388
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10390	31.373	NaN	2522.9	30	0	618.56	0.034	+			4215	ATGAPPRRQ	9	55	477.2673032486556	952.5200535641112	2	477.2688293457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATGAPPRRQ_	ENST00000479644.1_1_6:31939773-31940810:+|nuORF;nc|ENSG00000204344|P49842-1|STK19;nc|ENSG00000204344|P49842-2|STK19	35.61828744233558	0.47037581924408073	3				NaN	NaN	0	NaN	5972	4416	10388
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10402	31.399	NaN	2361.6	30	0	1545.3	0.214				-1	 	0	34	461.25971191491254	920.5048708966251	2	461.26171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5981	4419	10401
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10403	31.402	NaN	2673.6	30	0	226.33	0.033	+			35136	SAIAAVIAR	9	54	436.27037204768095	870.5261911621619	2	436.7727355957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAIAAVIAR_	ENSG00000165949|ENST00000612813|IFI27;nc|ENSG00000165949|P40305-1|IFI27;nc|ENSG00000165949|P40305-3|IFI27;nc|ENSG00000165949|P40305-4|IFI27	110.11987700582712	0.028875675806141952	3				NaN	NaN	0	NaN	5982	4419	10401
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10413	31.425	NaN	3385.4	30	0	754.89	0.142	+			22157	KSRQAVSR	8	56	466.27456975237936	930.5345865715587	2	466.2769775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSRQAVSR_	ENSG00000103494|ENST00000647211|RPGRIP1L;nc|ENSG00000103494|Q68CZ1-2|RPGRIP1L;RPGRIP1L|p.D821*|1|0.35|ENSG00000103494|chr16:53645847-53645848|-/A|frameshift_variant;RPGRIP1L|p.N241*|1|0.28|ENSG00000103494|chr16:53686487-53686488|TT/-|frameshift_variant	40.77816245573522	0.6514838689002179	3				NaN	NaN	0	NaN	5989	4422	10412
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10425	31.453	NaN	8288.9	30	0	1160.1	0.143				-1	CMHVAEKF	8	70	511.2330899759856	1020.4516270187712	2	511.23590087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_C(Carbamidomethyl (C))MHVAEKF_	TOPAZ1|p.N258K|1|0.44|ENSG00000173769|chr3:44243280-44243280|T/A|missense_variant	65.80317337860623	0.44433089765398776	3				NaN	NaN	0	NaN	5998	4425	10424
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10443	31.498	NaN	2773.4	30	0	672.52	0.214				-1	 	0	56	450.26172293219804	898.5088929311961	2	450.26336669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	6010	4431	10442
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10444	31.502	NaN	1139.1	30	0	139.87	0.035				-1	LPPAMKRY	8	47	496.2743978415224	990.5342427498448	2	496.2764892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LPPAM(Oxidation (M))KRY_	ENSG00000111671|ENST00000524270|SPSB2	44.53106598305862	0.628196326904373	3				NaN	NaN	0	NaN	6011	4431	10442
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10465	31.55	NaN	441.37	30	0	177.6	0.215	+			6308	AVSVVPAG	8	15	350.20554648217444	698.3965400311489	2	350.2068176269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVSVVPAG_	ENST00000291672.5_1_21:47602711-47602843:-|nuORF	10.184766708764876	0.7843118145031319	3				NaN	NaN	0	NaN	6026	4437	10464
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10466	31.554	NaN	1706.6	30	0	353.98	0.034	+			50038	WEEAAHDL	8	54	485.71518927555746	969.415825617915	2	485.717529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WEEAAHDL_	ENSG00000100380|ENST00000216218|ST13;nc|ENSG00000212789|Q8NFI4|ST13P5;nc|ENSG00000232150|Q8IZP2|ST13P4;ST13|p.G306Efs*50|1|0.18|ENSG00000100380|chr22:40827160-40827160|C/-|frameshift_variant	53.351449002276354	0.5676011784961348	3				NaN	NaN	0	NaN	6027	4437	10464
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10480	31.583	NaN	3167.3	30	0	1687.3	0.144	+			368	AARFTPGRR	9	30	344.53305914768566	1030.577348043257	3	344.5340576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AARFTPGRR_	ENST00000295903.8_2_3:64532480-64532591:-|nuORF	26.69291269510374	0.5537881896960711	3				NaN	NaN	0	NaN	6038	4440	10479
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10509	31.656	NaN	6645.8	30	0	724.83	0.142				-1	 	0	58	479.78607540445944	957.5575978757189	2	479.787841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	6058	4449	10508
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10530	31.707	NaN	1486.5	30	0	327.24	0.143			+	41916	SVVGRVNHK	9	40	498.29080315881623	994.5670533844325	2	498.2922058105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVVGRVNHK_	REV__ENSG00000240344|ENST00000392283|PPIL3;REV__ENST00000463866.1_1_2:201736120-201746236:-|nuORF;REV__nc|ENSG00000240344|Q9H2H8-2|PPIL3	34.172542307311794	0.4838870758800184	3				NaN	NaN	0	NaN	6073	4455	10529
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10565	31.79	NaN	4859.2	30	0	2077.4	0.145	+			31764	QPFYHDDSY	9	59	586.2371958067283	1170.4598386802566	2	586.2394409179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QPFYHDDSY_	ENSG00000171223|ENST00000302754|JUNB;JUNB|p.G115Vfs*35|2|0.33|ENSG00000171223|chr19:12792111-12792111|G/-|frameshift_variant;JUNB|p.G126Afs*24|1|0.32|ENSG00000171223|chr19:12792144-12792144|G/-|frameshift_variant;JUNB|p.S28Yfs*7|1|0.17|ENSG00000171223|chr19:12791850-12791853|CTCT/-|frameshift_variant	53.351449002276354	0.2690372970092375	3				NaN	NaN	0	NaN	6099	4464	10564
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10589	31.854	NaN	3661	30	0	1790.7	0.142			+	27789	MRVANSTM	8	42	463.21484317861393	924.4151334240279	2	463.216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_MRVANSTM(Oxidation (M))_	REV__ENSG00000158769|ENST00000368026|F11R;REV__F11R|p.P221H|1|0.23|ENSG00000158769|chr1:160999908-160999908|G/T|missense_variant;REV__nc|ENSG00000158769|Q9Y624-2|F11R	57.81127852772723	0.5234495074909924	3				NaN	NaN	0	NaN	6114	4473	10588
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10600	31.881	NaN	2331.2	30	0	326.15	0.142	+			38074	SPSSGETRS	9	53	454.21003385026387	906.4055147673278	2	454.2114562988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SPSSGETRS_	ENSG00000057468|ENST00000263187|MSH4	85.16082228582465	0.07850854922700509	3				NaN	NaN	0	NaN	6122	4476	10599
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10611	31.907	NaN	1904.1	30	0	195.74	0.214	+			11284	FKDVAEIQ	8	55	475.25310824184146	948.4916635504829	2	475.2544250488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FKDVAEIQ_	ENSG00000188906|ENST00000298910|LRRK2;LRRK2|p.K1328Rfs*8|1|0.21|ENSG00000188906|chr12:40308485-40308485|A/-|frameshift_variant;LRRK2|p.K906Rfs*8|1|0.29|ENSG00000188906|chr12:40293568-40293568|A/-|frameshift_variant;LRRK2|p.L818Dfs*10|1|0.07|ENSG00000188906|chr12:40284084-40284085|-/GACTGCT|frameshift_variant;LRRK2|p.N2261Kfs*9|1|0.28|ENSG00000188906|chr12:40356119-40356120|-/A|frameshift_variant;LRRK2|p.N710Mfs*2|1|0.49|ENSG00000188906|chr12:40278144-40278144|A/-|frameshift_variant;LRRK2|p.R1639Gfs*15|1|0.59|ENSG00000188906|chr12:40320068-40320068|A/-|frameshift_variant;LRRK2|p.R1639Kfs*13|1|0.36|ENSG00000188906|chr12:40320067-40320068|-/A|frameshift_variant	69.6276240434122	0.4100012001731381	3				NaN	NaN	0	NaN	6130	4479	10610
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10612	31.91	NaN	3069.1	30	0	891.39	0.038	+			31936	QQQALALEQQ	10	34	386.20358861128943	1155.5889364340683	3	386.2043762207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QQQALALEQQ_	ENSG00000136935|ENST00000373555|GOLGA1;ENST00000475407.5_2_9:127642811-127683993:-|nuORF	21.9598887501803	0.7004979571547932	3				NaN	NaN	0	NaN	6131	4479	10610
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10622	31.932	NaN	1817.8	30	0	476.77	0.142	+			10295	ETPICDRI	8	49	473.7370858392724	945.4596187453449	2	473.7388916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ETPICDRI_	CR1|p.P1583Lfs*44|1|0.22|ENSG00000203710|chr1:207609487-207609487|C/-|frameshift_variant;ENSG00000203710|ENST00000367049|CR1;ENST00000367050.8_1_1:207669597-207732429:+|nuORF;ENST00000434033.5_1_1:207669690-207707642:+|nuORF;ENST00000436595.1_1_1:207669690-207743292:+|nuORF;nc|ENSG00000203710|P17927|CR1	38.80614096846853	0.6637206697844082	3				NaN	NaN	0	NaN	6138	4482	10621
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10633	31.958	NaN	2948.4	30	0	558.35	0.143				-1	LLCCFRAL	8	56	498.26250393024026	NaN	0	498.2623596191406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_LLC(Carbamidomethyl (C))CFRAL_	ENSG00000171053|ENST00000305738|PATE1;nc|ENSG00000171053|Q8WXA2-2|PATE1	44.53106598305862	1.7418937515398478	3				NaN	NaN	0	NaN	6146	4485	10632
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10687	32.089	NaN	210.51	30	0	31.978	0.214			+	7777	DPEAGWPV	8	22	435.7033386230469	NaN	0	435.7033386230469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DPEAGWPV_	REV__ENSG00000105672|ENST00000402764|ETV2;REV__ETV2|p.R314Efs*14|1|0.33|ENSG00000105672|chr19:35644757-35644757|G/-|frameshift_variant;REV__nc|ENSG00000105672|O00321-2|ETV2	13.775330524044264	1.7418937515398478	3				NaN	NaN	0	NaN	6185	4500	10686
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10688	32.093	NaN	944.08	30	0	244.17	0.033			+	13530	GLRGRRPA	8	30	441.77257673479454	881.5306005363891	2	441.7734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GLRGRRPA_	REV__ENST00000455045.5_1_19:55670954-55672526:-|nuORF;REV__ENST00000527223.6_2_19:55670954-55672526:-|nuORF	14.664097394203935	0.7913966407026132	3				NaN	NaN	0	NaN	6186	4500	10686
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10698	32.114	NaN	2107.8	30	0	305.27	0.142			+	10213	ETGPAHRR	8	59	462.24322301422063	922.4718930952413	2	462.2453918457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ETGPAHRR_	REV__ENST00000585457.5_1_17:42254041-42254848:-|nuORF;REV__nc|ENSG00000267080|Q495Z4|ASB16-AS1	40.5726180659479	0.6527593143185008	3				NaN	NaN	0	NaN	6193	4503	10697
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10708	32.138	NaN	5008.2	30	0	1126	0.143				-1	 	0	62	495.77024704118463	989.5259411491693	2	495.7726135253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	6200	4506	10707
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10717	32.16	NaN	3115.1	30	0	1366.2	0.143	+			7820	DPSQYQSL	8	44	490.22197465752276	978.4293963818455	2	490.2240905761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))DPSQYQSL_	ENSG00000180543|ENST00000322128|TSPYL5;TSPYL5|p.D47E|1|0.07|ENSG00000180543|chr8:97277704-97277704|G/T|missense_variant;TSPYL5|p.N134Mfs*30|1|0.59|ENSG00000180543|chr8:97277444-97277444|T/-|frameshift_variant;TSPYL5|p.R137Afs*27|1|0.16|ENSG00000180543|chr8:97277436-97277436|G/-|frameshift_variant	63.30626980617807	0.4690498839812213	3				NaN	NaN	0	NaN	6206	4509	10716
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10727	32.185	NaN	1187.5	30	0	84.202	0.144	+			16348	HELMKRLM	8	53	537.2821930561414	1072.5498331790827	2	537.2848510742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_HELMKRLM(Oxidation (M))_	ENSG00000172938|ENST00000309106|MRGPRD	50.0245360154114	0.5941082100236891	3				NaN	NaN	0	NaN	6213	4512	10726
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10737	32.209	NaN	2116.5	30	0	441.42	0.141				-1	 	0	49	450.2800086573093	898.5454643814186	2	450.7828063964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	6220	4515	10736
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10775	32.315	NaN	1327.4	30	0	372.55	0.214			+	8357	EALIDLPH	8	36	454.2480457603303	906.4815385874606	2	454.2496032714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EALIDLPH_	REV__TSPEAR|p.R30H|1|0.33|ENSG00000175894|chr21:44567999-44567999|C/T|missense_variant	35.200714571348534	0.6875396545722289	3				NaN	NaN	0	NaN	6243	4530	10774
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10776	32.319	NaN	1384.7	30	0	217.17	0.035			+	-1	FYATCRCQ	8	53	524.7217212326949	1047.4288895321897	2	524.7244262695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_FYATC(Carbamidomethyl (C))RCQ_	REV__ENSG00000123384|ENST00000243077|LRP1;REV__ENST00000556356.1_1_12:57602422-57606335:+|nuORF	26.79610172149135	0.7524337208463756	3				NaN	NaN	0	NaN	6244	4530	10774
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10786	32.341	NaN	4714.6	30	0	1993	0.142				-1	 	0	53	465.28513407553197	928.555715217864	2	465.287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	6251	4533	10785
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10812	32.41	NaN	3977.8	30	0	957.53	0.143	+			12587	GEHGLIIRV	9	48	497.2946593070304	992.5747656808608	2	497.2960205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEHGLIIRV_	ENSG00000078618|ENST00000352171|NRDC;nc|ENSG00000078618|O43847-2|NRDC	54.722347961057174	0.257609425301511	3				NaN	NaN	0	NaN	6268	4542	10811
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10855	32.516	NaN	3399.8	30	0	1087.5	0.214			+	29892	PLLSTWNL	8	50	472.2659639501575	942.5173749671151	2	472.2679443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PLLSTWNL_	REV__ENSG00000144959|ENST00000475381|NCEH1;REV__nc|ENSG00000144959|Q6PIU2-2|NCEH1;REV__nc|ENSG00000144959|Q6PIU2-3|NCEH1	65.80317337860623	0.44433089765398776	3				NaN	NaN	0	NaN	6299	4554	10854
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10856	32.52	NaN	5324.3	30	0	1654.6	0.106				-1	 	0	54	479.79881012190253	957.5830673106051	2	479.80078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	6300	4554	10854
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10857	32.522	NaN	7050.1	30	0	1157.2	0.034				-1	 	0	63	483.7648361673165	965.515119401433	2	483.7665710449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	6301	4554	10854
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10884	32.591	NaN	4506.8	30	0	1459.5	0.142				-1	 	0	53	466.29298305258465	930.5714131719693	2	466.29437255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	6319	4563	10883
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10890	32.609	NaN	1744.3	30	0	175.13	0.143	+			50056	WFALLQNL	8	49	502.7801687729176	1003.5457846126352	2	502.78192138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WFALLQNL_	ENSG00000058335|ENST00000558480|RASGRF1;nc|ENSG00000058335|Q13972|RASGRF1;RASGRF1|p.L299Yfs*9|1|0.19|ENSG00000058335|chr15:79035193-79035193|A/-|frameshift_variant	57.452649787351945	0.526999880452039	3				NaN	NaN	0	NaN	6322	4566	10889
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10898	32.631	NaN	2872.2	30	0	598.49	0.214				-1	 	0	51	468.22672070689043	934.4388884805809	2	468.2291564941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	6327	4569	10897
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10899	32.634	NaN	861.23	30	0	149.34	0.032			+	1853	AILAAIKC	8	30	401.74537348844495	801.4761940436899	2	401.746826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AILAAIKC_	REV__ENSG00000169330|ENST00000305428|MINAR1;REV__ENST00000559272.1_1_15:79756054-79760723:+|nuORF	49.21078951299608	0.5991576752473486	3				NaN	NaN	0	NaN	6328	4569	10897
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10908	32.655	NaN	4688	30	0	774.84	0.142				-1	 	0	62	485.7983078963853	969.5820628595707	2	485.8006286621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	6334	4572	10907
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10931	32.71	NaN	8171.7	30	0	1085.8	0.142				-1	 	0	55	453.7537196189445	905.492886304689	2	453.7557678222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	6351	4578	10930
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10955	32.766	NaN	2941.8	30	0	682.92	0.141				-1	 	0	51	430.7565080431837	859.4984631531674	2	430.75811767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	6369	4584	10954
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10966	32.793	NaN	3811.4	30	0	559.2	0.214				-1	 	0	60	499.73222072315554	997.4498885131111	2	499.734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	6377	4587	10965
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10967	32.796	NaN	1020.9	30	0	200.85	0.034			+	18795	ITRMMGKQ	8	36	482.75631586244305	963.4980787916861	2	482.75762939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ITRMMGKQ_	REV__nc|ENSG00000155657|Q8WZ42-6|TTN	20.481830146152948	0.8005983782650069	3				NaN	NaN	0	NaN	6378	4587	10965
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10978	32.821	NaN	5718.1	30	0	2809.2	0.214			+	47468	VQAFVIAQQ	9	61	502.2820128781241	1002.5494728230482	2	502.2834777832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VQAFVIAQQ_	REV__ENSG00000184831|ENST00000379226|APOO;REV__nc|ENSG00000184831|Q9BUR5-2|APOO	73.97473282117947	0.12360187025703594	3				NaN	NaN	0	NaN	6386	4590	10977
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10979	32.825	NaN	1175.2	30	0	212.52	0.106			+	46400	VEMIAIAK	8	49	445.7562523995688	889.4979518659376	2	445.7571105957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_VEM(Oxidation (M))IAIAK_	REV__ENSG00000143499|ENST00000366957|SMYD2;REV__ENST00000491455.5_1_1:214507363-214510124:+|nuORF	53.351449002276354	0.5676011784961348	3				NaN	NaN	0	NaN	6387	4590	10977
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10980	32.827	NaN	1134.1	30	0	120.19	0.035	+			28292	NECGKAFSL	9	48	513.2398150862084	NaN	0	513.2399291992188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_NEC(Carbamidomethyl (C))GKAFSL_	ENSG00000197062|ENST00000421553|ZSCAN26;ENSG00000197782|ENST00000683561|ZNF780A;nc|ENSG00000197062|Q16670-2|ZSCAN26;nc|ENSG00000197062|Q16670|ZSCAN26;nc|ENSG00000197782|O75290-3|ZNF780A	53.08895987439943	0.18540527177656715	3				NaN	NaN	0	NaN	6388	4590	10977
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10990	32.848	NaN	9759.6	30	0	2750.2	0.214				-1	 	0	64	481.29810594206816	960.5816589509363	2	481.2996826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	6395	4593	10989
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10991	32.852	NaN	1273.7	30	0	155.71	0.036	+			39564	STGHVGFIFK	10	53	546.7962144957597	NaN	0	546.7957763671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STGHVGFIFK_	ENSG00000137575|ENST00000260130|SDCBP;ENST00000523441.1_1_8:59490633-59492419:+|nuORF;nc|ENSG00000137575|O00560-2|SDCBP;nc|ENSG00000137575|O00560-3|SDCBP	40.77816245573522	0.36390427802201647	3				NaN	NaN	0	NaN	6396	4593	10989
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11013	32.903	NaN	1268.1	30	0	549.81	0.142	+			31542	QLLLQPQL	8	45	476.7930792310366	951.5716055288732	2	476.7947998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QLLLQPQL_	PCM1|p.K787Nfs*31|2|0.32|ENSG00000078674|chr8:17962067-17962067|A/-|frameshift_variant	38.80614096846853	0.6637206697844082	3				NaN	NaN	0	NaN	6412	4599	11012
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11046	32.983	NaN	2304	30	0	759.55	0.143	+			39525	STFRGLMK	8	44	470.2606255915192	NaN	0	470.260498046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STFRGLMK_	ENSG00000171303|ENST00000302909|KCNK3	42.47446043378293	1.7418937515398478	3				NaN	NaN	0	NaN	6436	4608	11045
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11057	33.01	NaN	8528.9	30	0	1410.3	0.142				-1	 	0	67	485.7983078963853	969.5820628595707	2	485.80010986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	6444	4611	11056
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11086	33.094	NaN	1042.2	30	0	614.1	0.143			+	31817	QPQAETAGLA	10	39	493.2516211241408	984.4886893150816	2	493.2532043457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QPQAETAGLA_	REV__ENSG00000180535|ENST00000609256|BHLHA15	31.529811441608018	0.6223461015008678	3				NaN	NaN	0	NaN	6461	4623	11085
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11111	33.161	NaN	1364.3	30	0	199.58	0.142	+			27107	MANGAVIHL	9	49	471.2458626902835	940.477172447367	2	471.24761962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))ANGAVIHL_	ENSG00000099995|ENST00000215793|SF3A1;nc|ENSG00000099995|Q15459-2|SF3A1	88.64286706044652	0.06869153472052109	3				NaN	NaN	0	NaN	6477	4632	11110
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11137	33.231	NaN	5093.4	30	0	1329.9	0.141				-1	 	0	56	423.2567714389172	844.4989899446344	2	423.25860595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	6494	4641	11136
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11148	33.256	NaN	1184.3	30	0	503.96	0.214				-1	 	0	24	442.2826317381176	882.5507105430352	2	442.2845458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	6502	4644	11147
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11149	33.26	NaN	905.93	30	0	124.12	0.034	+			39877	STLPPLVSR	9	44	485.2898864746094	NaN	0	485.2898864746094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STLPPLVSR_	ENSG00000186854|ENST00000409520|TRABD2A;nc|ENSG00000186854|Q86V40-2|TRABD2A	25.57405402267927	0.3484490411150625	3				NaN	NaN	0	NaN	6503	4644	11147
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11171	33.311	NaN	9899.8	30	0	3026.8	0.214	+			37351	SLEVRSSK	8	50	453.25613789663186	904.4977228600637	2	453.25836181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLEVRSSK_	AluSz_dup71343|chr13:27959735-27960035:-|1.3846622943211524|0.0573341797523608|4.59|474.0|2|1|sense	60.97194046774394	0.49215940876911696	3				NaN	NaN	0	NaN	6519	4650	11170
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11172	33.314	NaN	4870.4	30	0	1688.4	0.041	+			17417	IASRWIWDIAW	11	51	472.9188169180075	1415.7346213542226	3	472.92120361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IASRWIWDIAW_	ENSG00000184786|ENST00000366774|DYNLT2	25.125986553469783	0.7262400895305658	3				NaN	NaN	0	NaN	6520	4650	11170
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11184	33.34	NaN	21088	30	0	9833.7	0.143				-1	 	0	66	492.3140910868396	982.6136292404792	2	492.3161315917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	6529	4653	11183
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11199	33.384	NaN	1929.6	30	0	247.96	0.143			+	22065	KSKSFLKK	8	55	483.31028818644813	NaN	0	483.3105163574219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSKSFLKK_	REV__ENST00000496726.5_1_3:25777437-25777596:-|nuORF	40.77816245573522	1.7418937515398478	3				NaN	NaN	0	NaN	6538	4659	11198
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11209	33.409	NaN	2307.2	30	0	803.71	0.214			+	-1	ATAKLPKMPL	10	28	362.5509434442255	1084.6310009328765	3	362.55230712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ATAKLPKM(Oxidation (M))PL_	REV__ABR|p.L352Wfs*29|2|0.56|ENSG00000159842|chr17:1067205-1067205|G/-|frameshift_variant;REV__ENSG00000159842|ENST00000302538|ABR;REV__nc|ENSG00000159842|Q12979-2|ABR;REV__nc|ENSG00000159842|Q12979-4|ABR	17.468008924990375	0.7276870902328821	3				NaN	NaN	0	NaN	6545	4662	11208
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11210	33.413	NaN	848.13	30	0	60.843	0.035	+			25445	LPPSLCSPE	9	51	500.2476747178691	NaN	0	500.2478942871094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LPPSLC(Carbamidomethyl (C))SPE_	ENST00000261799.8_1_5:149535034-149535298:-|nuORF	45.9519527083369	0.2345902329052062	3				NaN	NaN	0	NaN	6546	4662	11208
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11229	33.46	NaN	1709.1	30	0	228.32	0.143	+			44869	TTVESLIQK	9	56	509.79284361036343	NaN	0	509.7929382324219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTVESLIQK_	ENSG00000157107|ENST00000430046|FCHO2;nc|ENSG00000157107|Q0JRZ9-2|FCHO2;nc|ENSG00000157107|Q0JRZ9-3|FCHO2	87.69643885390035	0.04624013146650493	3				NaN	NaN	0	NaN	6559	4668	11228
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11235	33.478	NaN	1082.6	30	0	340.47	0.214			+	12421	GEAQLRIAM	9	36	494.76735620434926	987.5201594754985	2	494.7684326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEAQLRIAM_	REV__ENSG00000023892|ENST00000316637|DEF6	30.503639358989545	0.5181749237905803	3				NaN	NaN	0	NaN	6562	4671	11234
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11236	33.482	NaN	1326.8	30	0	299.3	0.035	+			26570	LTTEVHPEL	9	47	519.7775771574336	NaN	0	519.7775268554688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LTTEVHPEL_	ENSG00000125991|ENST00000348547|ERGIC3;ENST00000486268.5_1_20:34129846-34130758:+|nuORF;nc|ENSG00000125991|Q9Y282-2|ERGIC3;nc|ENSG00000125991|Q9Y282-3|ERGIC3	51.33545320467046	0.19748963086191895	3				NaN	NaN	0	NaN	6563	4671	11234
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11260	33.535	NaN	1080.7	30	0	271.73	0.214	+			41802	SVSRKQAR	8	36	466.2749174344069	930.5352819356139	2	466.2761535644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSRKQAR_	ENSG00000149929|ENST00000279392|HIRIP3	30.503639358989545	0.7238069182250283	3				NaN	NaN	0	NaN	6581	4677	11259
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11261	33.539	NaN	1006.8	30	0	273.32	0.036	+			7114	DAAFGKRKES	10	36	554.7921752929688	NaN	0	554.7921752929688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DAAFGKRKES_	ENST00000470032.1_1_5:142416808-142421143:+|nuORF	19.1035232394073	0.4201028297492154	3				NaN	NaN	0	NaN	6582	4677	11259
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11283	33.592	NaN	1189.7	30	0	488.3	0.143				-1	WDPSGMLLA	9	35	503.24078369140625	NaN	0	503.24078369140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_WDPSGM(Oxidation (M))LLA_	ENSG00000092377|ENST00000383032|TBL1Y;ENSG00000101849|ENST00000645353|TBL1X;nc|ENSG00000101849|O60907-2|TBL1X	19.359975847455235	0.3714571876404798	3				NaN	NaN	0	NaN	6598	4683	11282
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11299	33.627	NaN	2185.7	30	0	638.86	0.214	+			42557	TASESSYQL	9	54	493.2262307646695	984.437908596139	2	493.22772216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TASESSYQL_	ENSG00000137501|ENST00000359152|SYTL2;nc|ENSG00000137501|Q9HCH5-12|SYTL2;nc|ENSG00000137501|Q9HCH5-13|SYTL2;nc|ENSG00000137501|Q9HCH5-14|SYTL2;nc|ENSG00000137501|Q9HCH5-2|SYTL2;nc|ENSG00000137501|Q9HCH5-7|SYTL2;nc|ENSG00000137501|Q9HCH5-8|SYTL2;nc|ENSG00000137501|Q9HCH5-9|SYTL2;nc|ENSG00000137501|Q9HCH5|SYTL2;SYTL2|p.Q663Tfs*35|1|0.14|ENSG00000137501|chr11:85709344-85709345|-/T|frameshift_variant	78.26377905018397	0.10505600812668463	3				NaN	NaN	0	NaN	6611	4686	11298
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11300	33.631	NaN	1103.8	30	0	672.35	0.035			+	41923	SVVKKSLPK	9	15	329.2183837890625	NaN	0	329.2183837890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVVKKSLPK_	REV__EHBP1|p.N344Ifs*2|1|0.38|ENSG00000115504|chr2:62864894-62864894|A/-|frameshift_variant;REV__EHBP1|p.T756Qfs*17|1|0.44|ENSG00000115504|chr2:62949001-62949001|A/-|frameshift_variant;REV__ENSG00000115504|ENST00000431489|EHBP1;REV__ENST00000494958.1_1_2:62934317-63053404:+|nuORF;REV__nc|ENSG00000115504|Q8NDI1-2|EHBP1;REV__nc|ENSG00000115504|Q8NDI1|EHBP1	11.511019455917149	0.3980220838287494	3				NaN	NaN	0	NaN	6612	4686	11298
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11307	33.649	NaN	1341.2	30	0	143.96	0.141	+			49420	VVVAVGRAL	9	45	442.2894125778232	NaN	0	442.2900695800781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVVAVGRAL_	ENSG00000167986|ENST00000301764|DDB1;ENST00000414411.3_1_11:61081295-61081943:-|nuORF	97.47269410471826	0.026532356238405514	3				NaN	NaN	0	NaN	6616	4689	11306
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11326	33.697	NaN	5353.9	30	0	1385.6	0.142			+	267	AAMRETVK	8	55	453.24771586433667	904.4808787954734	2	453.2497863769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAMRETVK_	REV__CCDC116|p.A93V|1|0.38|ENSG00000161180|chr22:21634227-21634227|C/T|missense_variant	53.351449002276354	0.5676011784961348	3				NaN	NaN	0	NaN	6629	4695	11325
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11333	33.717	NaN	2388.5	30	0	930.7	0.215	+			45434	TVYEEMMAK	9	51	551.2494561726684	1100.4843594121367	2	551.252685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVYEEMMAK_	ENSG00000144659|ENST00000650617|SLC25A38;SLC25A38|p.G301V|1|0.09|ENSG00000144659|chr3:39396507-39396507|G/T|missense_variant	77.31757898189308	0.1091473830098891	3				NaN	NaN	0	NaN	6633	4698	11332
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11334	33.721	NaN	2383	30	0	518.99	0.106			+	5958	AVLLAWEY	8	54	482.75980435103946	963.505055768879	2	482.7618103027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVLLAWEY_	REV__ENSG00000125089|ENST00000245105|SH3TC1;REV__ENST00000502669.5_1_4:8220037-8239209:+|nuORF;REV__ENST00000506360.5_1_4:8220037-8234255:+|nuORF;REV__ENST00000515682.5_1_4:8207046-8242679:+|nuORF	69.09296820870183	0.4144562040832486	3				NaN	NaN	0	NaN	6634	4698	11332
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11335	33.723	NaN	1975.5	30	0	330.55	0.106			+	48833	VVATMRESK	9	46	510.77948903478926	1019.5444251363785	2	510.78131103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVATMRESK_	REV__ENSG00000175449|ENST00000380005|RFESD;REV__nc|ENSG00000175449|Q8TAC1|RFESD	69.6276240434122	0.14239879520340665	3				NaN	NaN	0	NaN	6635	4698	11332
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11336	33.725	NaN	998.61	30	0	204.04	0.043	+			25150	LLSLYQKY	8	32	514.2952880859375	NaN	0	514.2952880859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LLSLYQKY_	ENSG00000150477|ENST00000280020|KIAA1328;ENST00000590617.5_1_18:34415331-34802187:+|nuORF;ENST00000592611.5_1_18:34415331-34809581:+|nuORF;nc|ENSG00000150477|Q86T90-2|KIAA1328	24.20275056022122	1.7418937515398478	3				NaN	NaN	0	NaN	6636	4698	11332
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11380	33.834	NaN	1174.8	30	0	217	0.143	+			8943	EEYPDRIM	8	42	526.7379292686968	1051.4613056041935	2	526.7405395507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EEYPDRIM_	ENSG00000101162|ENST00000217133|TUBB1;ENSG00000137267|ENST00000333628|TUBB2A;ENSG00000137285|ENST00000259818|TUBB2B;ENSG00000188229|ENST00000340384|TUBB4B;ENSG00000196230|ENST00000327892|TUBB;ENSG00000258947|ENST00000315491|TUBB3;ENST00000404155.1_1_6:3177457-3179994:-|nuORF;ENST00000518096.1_1_8:30209523-30210210:+|nuORF;ENST00000604929.1_1_9:140136931-140138005:+|nuORF;nc|ENSG00000258947|Q13509-2|TUBB3;TUBB2B|p.D177Hfs*21|1|0.32|ENSG00000137285|chr6:3225559-3225560|TC/-|frameshift_variant	51.33545320467046	0.5859736979383976	3				NaN	NaN	0	NaN	6668	4710	11379
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11398	33.881	NaN	2358.6	30	0	299.04	0.141	+			23476	LAEVGRVL	8	46	428.7649895990689	855.5154262649378	2	428.7664489746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LAEVGRVL_	ENSG00000010165|ENST00000361735|METTL13;METTL13|p.L636Pfs*8|1|0.12|ENSG00000010165|chr1:171796557-171796558|-/C|frameshift_variant;nc|ENSG00000010165|Q8N6R0-1|METTL13;nc|ENSG00000010165|Q8N6R0-2|METTL13;nc|ENSG00000010165|Q8N6R0-3|METTL13;nc|ENSG00000010165|Q8N6R0-4|METTL13	66.42927471994793	0.4381325844043345	3				NaN	NaN	0	NaN	6680	4716	11397
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11412	33.912	NaN	1785.2	30	0	210.08	0.144	+			31799	QPMEVQEGY	9	40	540.7354706045558	1079.4563882759114	2	540.73779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QPMEVQEGY_	ENSG00000130726|ENST00000253024|TRIM28;ENST00000601150.5_1_19:59059168-59060232:+|nuORF;nc|ENSG00000130726|Q13263-2|TRIM28	93.19546047674547	0.05585629608842056	3				NaN	NaN	0	NaN	6691	4719	11411
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11432	33.962	NaN	1491.4	30	0	319.97	0.143				-1	PAPCQRTY	8	38	496.738104607426	NaN	0	496.73785400390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_PAPC(Carbamidomethyl (C))QRTY_	ENSG00000198854|ENST00000368775|C1orf68	40.5726180659479	1.7418937515398478	3				NaN	NaN	0	NaN	6705	4725	11431
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11469	34.058	NaN	1546.6	30	0	245.98	0.144	+			45251	TVQELAIYK	9	42	532.8036454606288	NaN	0	532.8035278320312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVQELAIYK_	ENSG00000102595|ENST00000376747|UGGT2;nc|ENSG00000102595|Q9NYU1-2|UGGT2;UGGT2|p.N1268Ifs*10|1|0.3|ENSG00000102595|chr13:95859613-95859613|T/-|frameshift_variant	96.0336014099291	0.029433397039169355	3				NaN	NaN	0	NaN	6730	4737	11468
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11494	34.116	NaN	2819.3	30	0	1741.8	0.214	+			41284	SVLLFVTKK	9	28	345.55738650906744	1033.6503301274024	3	345.5586242675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVLLFVTKK_	ENSG00000198231|ENST00000389924|DDX42;ENST00000578593.1_1_17:61889231-61895755:+|nuORF;nc|ENSG00000198231|Q86XP3-2|DDX42	42.86426827375447	0.38666266728046506	3				NaN	NaN	0	NaN	6749	4743	11493
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11495	34.12	NaN	1073.2	30	0	161.86	0.035			+	34599	RVMQLMSY	8	44	514.2599722311647	NaN	0	514.2606201171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RVMQLMSY_	REV__ENSG00000167139|ENST00000300504|TBC1D21;REV__nc|ENSG00000167139|Q8IYX1-2|TBC1D21	55.50420428727701	1.7418937515398478	3				NaN	NaN	0	NaN	6750	4743	11493
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11539	34.245	NaN	3369.6	30	0	588.57	0.141				-1	 	0	46	434.2854319318504	866.5563109305008	2	434.2871398925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	6776	4761	11538
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11546	34.263	NaN	2916.8	30	0	951.24	0.214	+			36898	SIHILLGRR	9	37	355.56081002470194	1063.660600674306	3	355.5621337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIHILLGRR_	ENSG00000135898|ENST00000650999|GPR55	30.317721548370564	0.5199124245378496	3				NaN	NaN	0	NaN	6780	4764	11545
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11547	34.266	NaN	792.81	30	0	425.15	0.032			+	27356	MIPFYIYSAP	10	25	401.20452565646286	NaN	0	401.20477294921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MIPFYIYSAP_	REV__ENST00000519820.5_1_8:82626874-82633516:-|nuORF;REV__ENST00000524339.5_1_8:82626874-82630434:-|nuORF	17.468008924990375	0.4201028297492154	3				NaN	NaN	0	NaN	6781	4764	11545
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11554	34.284	NaN	13565	30	0	8386.6	0.145				-1	 	0	44	350.8766958549943	1049.6082581651829	3	350.8778991699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	6785	4767	11553
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11566	34.311	NaN	2597.9	30	0	365.48	0.143	+			12124	GAGEAPYANY	10	53	506.7221032336911	1011.4296535341822	2	506.7245178222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GAGEAPYANY_	ENST00000248451.7_1_2:219135136-219135235:+|nuORF	58.78195531508484	0.37691818691852547	3				NaN	NaN	0	NaN	6794	4770	11565
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11574	34.331	NaN	7541.6	30	0	2404.8	0.142	+			30224	PSSNVREY	8	53	476.2303349955521	950.4461170579042	2	476.232666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PSSNVREY_	ENSG00000198300|ENST00000326441|PEG3;nc|ENSG00000198300|Q9GZU2-2|PEG3;nc|ENSG00000198300|Q9GZU2-4|PEG3	47.657333605630114	0.6087971902037268	3				NaN	NaN	0	NaN	6799	4773	11573
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11585	34.358	NaN	1991.4	30	0	418.7	0.142	+			41624	SVQRIKAR	8	46	479.3010341479142	956.5875153626284	2	479.30230712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVQRIKAR_	ATP2A1|p.K572Efs*9|1|0.32|ENSG00000196296|chr16:28898392-28898393|-/C|frameshift_variant;ATP2A1|p.P571Rfs*21|2|0.37|ENSG00000196296|chr16:28898393-28898393|C/-|frameshift_variant;ENSG00000196296|ENST00000395503|ATP2A1;nc|ENSG00000196296|O14983-3|ATP2A1;nc|ENSG00000196296|O14983|ATP2A1	31.954861631926434	0.7126016770032289	3				NaN	NaN	0	NaN	6807	4776	11584
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11593	34.378	NaN	1293.4	30	0	106.5	0.144	+			34028	RSLDNFFAK	9	51	549.2888438094194	1096.5631346856387	2	549.2910766601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RSLDNFFAK_	ENSG00000091527|ENST00000264993|CDV3;nc|ENSG00000091527|Q9UKY7-2|CDV3	63.53385203322761	0.18415635464017938	3				NaN	NaN	0	NaN	6812	4779	11592
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11620	34.448	NaN	2100	30	0	548.34	0.142	+			18894	IVLAAGRNR	9	52	485.3005747968027	968.5865966604055	2	485.8039855957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IVLAAGRNR_	ENSG00000184465|ENST00000448612|WDR27;ENST00000546525.5_1_6:169959876-170034596:-|nuORF;nc|ENSG00000184465|A2RRH5-2|WDR27;nc|ENSG00000184465|A2RRH5|WDR27	50.0245360154114	0.3026755932229825	3				NaN	NaN	0	NaN	6830	4788	11619
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11646	34.517	NaN	2420.9	30	0	490.52	0.215			+	9119	EGLDLRHR	8	55	498.27275303495554	994.5309531367111	2	498.2742919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EGLDLRHR_	REV__DHX15|p.T231Pfs*6|1|0.27|ENSG00000109606|chr4:24570664-24570664|T/-|frameshift_variant;REV__ENSG00000109606|ENST00000336812|DHX15;REV__ENST00000513092.1_1_4:24582564-24586076:-|nuORF	55.50420428727701	0.5462892107279674	3				NaN	NaN	0	NaN	6847	4797	11645
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11647	34.52	NaN	1684.5	30	0	479.38	0.032				-1	 	0	35	394.70306039772385	787.3915678622477	2	394.7037658691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	6848	4797	11645
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11665	34.565	NaN	3983.5	30	0	496.51	0.214	+			37673	SLRRVAPR	8	49	477.8012339354187	953.5879149376374	2	477.80267333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLRRVAPR_	ENST00000377060.7_1_2:97499100-97499229:+|nuORF	51.33545320467046	0.5859736979383976	3				NaN	NaN	0	NaN	6860	4803	11664
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11666	34.569	NaN	2386.4	30	0	308.05	0.034			+	49064	VVKFDPQI	8	55	473.2736681933129	944.5327834534258	2	473.27581787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVKFDPQI_	REV__ENST00000556170.5_1_14:75573136-75593624:-|nuORF	42.47446043378293	0.6409579893742323	3				NaN	NaN	0	NaN	6861	4803	11664
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11676	34.592	NaN	1841.8	30	0	335.94	0.143	+			50181	WLLCFVSQ	8	59	498.2542565928219	994.4939602524438	2	498.2554626464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WLLCFVSQ_	nc|ENSG00000184809|P59052|B3GALT5-AS1	51.33545320467046	0.5859736979383976	3				NaN	NaN	0	NaN	6868	4806	11675
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11683	34.611	NaN	1830.9	30	0	451.5	0.214			+	25949	LSIALNEL	8	46	436.7567904415436	871.4990279498872	2	436.75830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSIALNEL_	REV__ENSG00000118965|ENST00000281405|WDR35;REV__ENST00000445063.5_1_2:20113365-20153734:-|nuORF;REV__nc|ENSG00000118965|Q9P2L0|WDR35	77.31757898189308	0.345924878368729	3				NaN	NaN	0	NaN	6872	4809	11682
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11684	34.614	NaN	1057.3	30	0	147.02	0.034			+	29373	PAHLRVRD	8	42	482.27773898621086	962.5409250392217	2	482.2795715332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PAHLRVRD_	REV__ENST00000443071.6_2_14:101010291-101034310:-|nuORF;REV__ENST00000556188.5_2_14:101010291-101035842:-|nuORF	40.5726180659479	0.6527593143185008	3				NaN	NaN	0	NaN	6873	4809	11682
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11712	34.696	NaN	1604	30	0	429.28	0.141			+	21264	KLNAKLPD	8	33	449.77169984030013	NaN	0	449.77130126953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KLNAKLPD_	REV__ENSG00000253309|ENST00000681248|SERPINE3;REV__nc|ENSG00000253309|A8MV23|SERPINE3	42.47446043378293	1.7418937515398478	3				NaN	NaN	0	NaN	6889	4821	11711
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11739	34.766	NaN	1725.3	30	0	683.79	0.14			+	378	AARTSVPG	8	22	379.7116394042969	NaN	0	379.7116394042969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AARTSVPG_	REV__ENSG00000145217|ENST00000398516|SLC26A1	15.63621529709179	1.7418937515398478	3				NaN	NaN	0	NaN	6907	4830	11738
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11769	34.848	NaN	3319.3	30	0	393.39	0.142			+	30181	PSKIGTLLK	9	59	478.80914560697545	955.6037382807509	2	478.81048583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PSKIGTLLK_	REV__ENSG00000174197|ENST00000703841|MGA;REV__MGA|p.D2578Rfs*45|1|0.32|ENSG00000174197|chr15:41762342-41762343|-/A|frameshift_variant;REV__MGA|p.E1249Rfs*25|2|0.28|ENSG00000174197|chr15:41729243-41729244|-/A|frameshift_variant;REV__MGA|p.E1249Rfs*42|1|0.17|ENSG00000174197|chr15:41729244-41729244|A/-|frameshift_variant;REV__MGA|p.L1297Wfs*39|1|0.3|ENSG00000174197|chr15:41734566-41734566|C/-|frameshift_variant;REV__MGA|p.S2228Kfs*5|1|0.33|ENSG00000174197|chr15:41750284-41750285|-/A|frameshift_variant;REV__MGA|p.T1916Qfs*7|1|0.4|ENSG00000174197|chr15:41749350-41749350|A/-|frameshift_variant;REV__nc|ENSG00000174197|Q8IWI9-3|MGA;REV__nc|ENSG00000174197|Q8IWI9|MGA	93.5975768576971	0.05472259948179787	3				NaN	NaN	0	NaN	6925	4842	11768
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11861	35.097	NaN	2465.3	30	0	231.86	0.214			+	33140	RERPHLRG	8	64	510.7940135537903	1019.5734741743806	2	510.796142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RERPHLRG_	REV__ENST00000359518.7_1_11:6486953-6494439:-|nuORF	53.351449002276354	0.5676011784961348	3				NaN	NaN	0	NaN	6984	4875	11860
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11862	35.101	NaN	1400	30	0	202.88	0.034	+			43157	TESTPITAV	9	43	459.74296093794544	NaN	0	459.74334716796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TESTPITAV_	ENSG00000181789|ENST00000314797|COPG1	71.29570347882199	0.10120983364817086	3				NaN	NaN	0	NaN	6985	4875	11860
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11891	35.173	NaN	3285.7	30	0	413.74	0.142			+	27309	MGVKLCKK	8	57	490.27496967159897	978.535386409998	2	490.7779541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))GVKLC(Carbamidomethyl (C))KK_	REV__ENSG00000175745|ENST00000327111|NR2F1;REV__ENSG00000185551|ENST00000394166|NR2F2	50.0245360154114	0.5941082100236891	3				NaN	NaN	0	NaN	7005	4884	11890
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11897	35.189	NaN	1021.3	30	0	227.99	0.144			+	-1	QKRMSPPLK	9	40	550.8199250409247	NaN	0	550.8206176757812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_QKRM(Oxidation (M))SPPLK_	REV__HCN4|p.R11Q|1|0.31|ENSG00000138622|chr15:73368239-73368239|C/T|missense_variant	24.519189625965996	0.35377483217337163	3				NaN	NaN	0	NaN	7008	4887	11896
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11942	35.309	NaN	2143.3	30	0	475.79	0.142			+	13599	GLVQTRRK	8	52	479.3010027247041	956.5874525162083	2	479.30230712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GLVQTRRK_	REV__ENSG00000164902|ENST00000297540|PHAX	30.503639358989545	0.7238069182250283	3				NaN	NaN	0	NaN	7038	4902	11941
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11951	35.331	NaN	1837.2	30	0	682.94	0.143			+	28512	NIALSPRPL	9	55	490.79664926923573	979.5787456052715	2	490.7987060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NIALSPRPL_	REV__ENSG00000139737|ENST00000418532|SLAIN1;REV__nc|ENSG00000139737|Q8ND83-2|SLAIN1;REV__nc|ENSG00000139737|Q8ND83-3|SLAIN1;REV__nc|ENSG00000139737|Q8ND83-4|SLAIN1;REV__nc|ENSG00000139737|Q8ND83|SLAIN1	58.78195531508484	0.22376836668196862	3				NaN	NaN	0	NaN	7044	4905	11950
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11958	35.349	NaN	926.62	30	0	181.56	0.141	+			46226	VEAPMPKL	8	37	442.7490154275472	NaN	0	442.749267578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VEAPMPKL_	ENSG00000106211|ENST00000248553|HSPB1;ENST00000423240.1_1_9:74622799-74623024:-|nuORF	60.97194046774394	1.7418937515398478	3				NaN	NaN	0	NaN	7048	4908	11957
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11963	35.365	NaN	887.4	30	0	199.4	0.214	+			38389	SRVHVCLY	8	36	488.758688539172	NaN	0	488.75897216796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SRVHVCLY_	ENSG00000154997|ENST00000388975|SEPTIN14	50.0245360154114	1.7418937515398478	3				NaN	NaN	0	NaN	7050	4911	11962
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11964	35.369	NaN	1302.9	30	0	315.01	0.036	+			47699	VSESGTFLGLG	11	49	533.7744446829433	1065.5343364326866	2	533.7756958007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSESGTFLGLG_	ENSG00000138073|ENST00000260643|PREB;ENST00000468045.5_1_2:27354838-27356101:-|nuORF	39.252832667884924	0.5681665794958463	3				NaN	NaN	0	NaN	7051	4911	11962
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12000	35.47	NaN	1490.1	30	0	216.37	0.214	+			27965	MVLEEPLTK	9	49	530.2897994801506	1058.565046027101	2	530.7943725585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MVLEEPLTK_	ENST00000423943.1_1_1:159931170-159946492:+|nuORF	41.42661286455405	0.403525789677298	3				NaN	NaN	0	NaN	7072	4926	11999
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12001	35.474	NaN	849.95	30	0	80.419	0.106	+			44003	TPIEGMLSH	9	49	492.7430860396281	983.4716191460562	2	492.7441711425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TPIEGMLSH_	ENSG00000170515|ENST00000303305|PA2G4;nc|ENSG00000170515|Q9UQ80-2|PA2G4;PA2G4|p.K373Efs*19|1|0.43|ENSG00000170515|chr12:56111517-56111518|-/A|frameshift_variant;PA2G4|p.T200Pfs*58|1|0.29|ENSG00000170515|chr12:56109899-56109899|A/-|frameshift_variant	53.351449002276354	0.2690372970092375	3				NaN	NaN	0	NaN	7073	4926	11999
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12002	35.476	NaN	911.2	30	0	127.33	0.034			+	27352	MIMPTILR	8	45	487.7799101470071	NaN	0	487.7792663574219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MIMPTILR_	REV__ENST00000608304.5_2_3:73674880-73675039:+|nuORF	38.80614096846853	1.7418937515398478	3				NaN	NaN	0	NaN	7074	4926	11999
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12013	35.499	NaN	1810.5	30	0	293.89	0.143				-1	 	0	57	490.74901614387966	979.4834793545593	2	490.7505187988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7082	4929	12012
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12039	35.575	NaN	2225.8	30	0	428.77	0.144				-1	 	0	54	532.8195632152131	1063.624573497226	2	532.8225708007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7096	4941	12038
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12071	35.674	NaN	1437.9	30	0	430.56	0.142	+			24957	LLALGLLAAG	10	36	456.30037332979254	NaN	0	456.3004150390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LLALGLLAAG_	ENSG00000196136|ENST00000393078|SERPINA3;nc|ENSG00000196136|P01011-2|SERPINA3;nc|ENSG00000196136|P01011-3|SERPINA3	44.53106598305862	0.34017787621393314	3				NaN	NaN	0	NaN	7113	4956	12070
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12079	35.694	NaN	1849.5	30	0	265.04	0.142				-1	 	0	47	454.762030785476	907.509508637752	2	454.76397705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7118	4959	12078
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12105	35.771	NaN	1995.1	30	0	611.51	0.214	+			24822	LISIGTVLSV	10	41	501.3146403877817	1000.6147278423634	2	501.31573486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LISIGTVLSV_	ENSG00000151812|ENST00000556826|SLC35F4;nc|ENSG00000151812|A4IF30-2|SLC35F4;nc|ENSG00000151812|A4IF30|SLC35F4	42.396135135203025	0.5270658956260207	3				NaN	NaN	0	NaN	7132	4971	12104
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12106	35.775	NaN	1406.7	30	0	317.6	0.035			+	-1	QAAMREMY	8	53	516.2185210494866	1030.4224891657732	2	516.220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Oxidation (M)	_QAAM(Oxidation (M))REM(Oxidation (M))Y_	REV__ENSG00000111817|ENST00000644252|DSE;REV__ENST00000607094.1_1_6:116600797-116720830:+|nuORF	55.50420428727701	0.5462892107279674	3				NaN	NaN	0	NaN	7133	4971	12104
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12166	35.943	NaN	1792.5	30	0	236.64	0.144			+	29951	PNDAHPQTQV	10	48	553.7653073845082	1105.5160618358163	2	553.7686157226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PNDAHPQTQV_	REV__ENSG00000129028|ENST00000249861|THAP10	40.77816245573522	0.5419747034533848	3				NaN	NaN	0	NaN	7169	4995	12165
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12215	36.074	NaN	3626.5	30	0	891.82	0.143	+			45358	TVTAQILLK	9	54	493.8146638035614	985.6147746739229	2	494.31817626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVTAQILLK_	ENSG00000178982|ENST00000248342|EIF3K;ENST00000514461.1_1_4:116964948-116965134:-|nuORF;ENST00000586932.5_1_19:39109833-39116793:+|nuORF;ENST00000593062.5_1_19:39109833-39121488:+|nuORF;nc|ENSG00000178982|Q9UBQ5-2|EIF3K	74.1650062923329	0.12277912660386392	3				NaN	NaN	0	NaN	7200	5013	12214
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12226	36.101	NaN	4972.4	30	0	788.13	0.142			+	31705	QNPGFLHL	8	59	463.24777091914837	924.4809889050968	2	463.2498474121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QNPGFLHL_	REV__ENSG00000105223|ENST00000409735|PLD3;REV__ENST00000485448.1_1_19:40872616-40872823:+|nuORF;REV__ENST00000493006.1_1_19:40872390-40872823:+|nuORF	54.76467175910256	0.5536104764165384	3				NaN	NaN	0	NaN	7208	5016	12225
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12247	36.153	NaN	3029.2	30	0	442.43	0.214	+			10375	EVAKVIVSM	9	57	488.27902342039556	974.5434939075911	2	488.7830810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EVAKVIVSM_	AKAP9|p.Q3083Nfs*28|1|0.15|ENSG00000127914|chr7:92089389-92089390|-/TGAATATCAAGCAGCTATGGAATGCC|frameshift_variant;AKAP9|p.T1942Lfs*3|3|0.18|ENSG00000127914|chr7:92062328-92062328|A/-|frameshift_variant;ENSG00000127914|ENST00000356239|AKAP9;ENST00000493453.1_1_7:91570251-91670224:+|nuORF;nc|ENSG00000127914|Q99996-1|AKAP9;nc|ENSG00000127914|Q99996-3|AKAP9;nc|ENSG00000127914|Q99996-4|AKAP9;nc|ENSG00000127914|Q99996-5|AKAP9;nc|ENSG00000127914|Q99996-6|AKAP9	113.41158876095287	0.025516849225023126	3				NaN	NaN	0	NaN	7223	5022	12246
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12248	36.157	NaN	1764.7	30	0	456.95	0.106	+			27686	MPVASSEASTL	11	50	546.7665784630641	NaN	0	546.7672119140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MPVASSEASTL_	ENSG00000169876|ENST00000306151|MUC17;ENSG00000169876|ENST00000306151|MUC17;ENSG00000169876|ENST00000306151|MUC17;MUC17|p.N4205Tfs*18|1|0.07|ENSG00000169876|chr7:101048918-101048918|A/-|frameshift_variant;MUC17|p.N4205Tfs*18|1|0.07|ENSG00000169876|chr7:101048918-101048918|A/-|frameshift_variant;MUC17|p.N4205Tfs*18|1|0.07|ENSG00000169876|chr7:101048918-101048918|A/-|frameshift_variant;MUC17|p.S3486Qfs*18|1|0.41|ENSG00000169876|chr7:101041869-101041870|-/C|frameshift_variant;MUC17|p.S3486Qfs*18|1|0.41|ENSG00000169876|chr7:101041869-101041870|-/C|frameshift_variant;MUC17|p.S3486Qfs*18|1|0.41|ENSG00000169876|chr7:101041869-101041870|-/C|frameshift_variant;nc|ENSG00000169876|Q685J3-2|MUC17;nc|ENSG00000169876|Q685J3-2|MUC17;nc|ENSG00000169876|Q685J3-2|MUC17	82.7504851949679	0.06877058779918643	3				NaN	NaN	0	NaN	7224	5022	12246
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12249	36.159	NaN	1373.8	30	0	251.66	0.034	+			48229	VTAVPTLLK	9	43	471.30519660517893	NaN	0	471.3054504394531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTAVPTLLK_	ENSG00000129235|ENST00000250101|TXNDC17;ENST00000571029.1_1_17:6544987-6546336:+|nuORF	69.6276240434122	0.10825701912424071	3				NaN	NaN	0	NaN	7225	5022	12246
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12266	36.202	NaN	2349.3	30	0	538.96	0.143	+			18974	IVSDFTIGR	9	54	504.27823382528226	1006.5419147173645	2	504.2803955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IVSDFTIGR_	ENSG00000110713|ENST00000324932|NUP98;nc|ENSG00000110713|P52948-2|NUP98;nc|ENSG00000110713|P52948-3|NUP98;nc|ENSG00000110713|P52948-4|NUP98;nc|ENSG00000110713|P52948-6|NUP98;nc|ENSG00000110713|P52948|NUP98;NUP98|p.N1328Tfs*89|2|0.22|ENSG00000110713|chr11:3699159-3699159|T/-|frameshift_variant	101.25262130126117	0.03792372629710479	3				NaN	NaN	0	NaN	7236	5028	12265
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12285	36.259	NaN	1777.5	30	0	267.74	0.144	+			43707	TKLWMSYF	8	54	546.2664173712092	NaN	0	546.2667236328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_TKLWM(Oxidation (M))SYF_	ENSG00000072315|ENST00000262839|TRPC5;ENSG00000133107|ENST00000379705|TRPC4;ENST00000426868.6_1_13:38213370-38229407:-|nuORF;nc|ENSG00000133107|Q9UBN4-2|TRPC4;nc|ENSG00000133107|Q9UBN4-3|TRPC4;nc|ENSG00000133107|Q9UBN4-5|TRPC4;nc|ENSG00000133107|Q9UBN4-6|TRPC4;TRPC4|p.F797Lfs*3|1|0.6|ENSG00000133107|chr13:37637446-37637446|A/-|frameshift_variant;TRPC4|p.R639Q|1|0.31|ENSG00000133107|chr13:37651428-37651428|C/T|missense_variant	40.77816245573522	1.7418937515398478	3				NaN	NaN	0	NaN	7246	5037	12284
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12292	36.279	NaN	1213.7	30	0	649.85	0.139			+	24473	LGGGTQLV	8	29	372.7174275223879	NaN	0	372.7174987792969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LGGGTQLV_	REV__ENST00000442406.5_1_3:184038690-184052693:+|nuORF	23.036711822280957	1.7418937515398478	3				NaN	NaN	0	NaN	7250	5040	12291
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12298	36.295	NaN	1370.1	30	0	243.97	0.141			+	11462	FNGEQPAL	8	40	438.2164839560146	874.4184149788292	2	438.218017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FNGEQPAL_	REV__ENSG00000128915|ENST00000261520|ICE2;REV__ENST00000561144.1_1_15:60740147-60741119:-|nuORF;REV__ICE2|p.R760Tfs*25|1|0.32|ENSG00000128915|chr15:60447987-60447988|-/T|frameshift_variant	35.61828744233558	0.6843154725607303	3				NaN	NaN	0	NaN	7253	5043	12297
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12321	36.358	NaN	5782	30	0	1659.2	0.214	+			36794	SICNRCVLK	9	61	518.275070429735	1034.53558792627	2	518.277587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SICNRCVLK_	ENSG00000171307|ENST00000393760|ZDHHC16;ENST00000459777.5_1_10:99206080-99216645:+|nuORF;ENST00000466895.5_1_10:99206080-99216645:+|nuORF;nc|ENSG00000171307|Q969W1-2|ZDHHC16;nc|ENSG00000171307|Q969W1-4|ZDHHC16	45.97224482568171	0.3502073465782774	3				NaN	NaN	0	NaN	7267	5052	12320
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12322	36.361	NaN	1789.7	30	0	284.3	0.034	+			23689	LASVSPSVAL	10	57	472.2765635133602	NaN	0	472.27685546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LASVSPSVAL_	ENSG00000134686|ENST00000683057|PHC2;nc|ENSG00000134686|Q8IXK0-4|PHC2;nc|ENSG00000134686|Q8IXK0|PHC2;PHC2|p.F605Lfs*128|1|0.21|ENSG00000134686|chr1:33332348-33332349|-/AACCC|frameshift_variant	68.78682469695295	0.16252363814257367	3				NaN	NaN	0	NaN	7268	5052	12320
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12343	36.43	NaN	2227.9	30	0	935.47	0.144	+			20209	KELGPHSSKT	10	48	542.2935423763175	1082.572531819435	2	542.296142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KELGPHSSKT_	CAPN2|p.Y66H|1|0.1|ENSG00000162909|chr1:223712836-223712836|T/C|missense_variant	49.536043120802724	0.461275219792494	3				NaN	NaN	0	NaN	7277	5064	12342
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12357	36.469	NaN	1918.1	30	0	164.45	0.143	+			11796	FSQQEVQF	8	55	506.7387755936963	1011.4629982541926	2	506.74114990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FSQQEVQF_	ENSG00000118322|ENST00000327245|ATP10B;ENST00000521033.5_1_5:160061154-160212677:-|nuORF;nc|ENSG00000118322|O94823-2|ATP10B;nc|ENSG00000118322|O94823-3|ATP10B	79.45101966838831	0.3281480470254892	3				NaN	NaN	0	NaN	7285	5070	12356
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12378	36.552	NaN	768.46	30	0	213.01	0.142	+			48539	VTNVTSLLK	9	31	487.79765151688554	NaN	0	487.797119140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTNVTSLLK_	ENSG00000137076|ENST00000314888|TLN1;ENSG00000171914|ENST00000636159|TLN2;nc|ENSG00000137076|Q9Y490-2|TLN1	40.05817265558897	0.275207446262312	3				NaN	NaN	0	NaN	7291	5085	12377
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12395	36.607	NaN	1564.1	30	0	333.54	0.214	+			14488	GTCLFVAVK	9	49	497.7718671439346	993.5291813546693	2	497.7729797363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GTC(Carbamidomethyl (C))LFVAVK_	ENSG00000198752|ENST00000361246|CDC42BPB	74.25504064058377	0.12238981753128622	3				NaN	NaN	0	NaN	7299	5094	12394
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12396	36.611	NaN	1248.7	30	0	236.69	0.034	+			13356	GKWITTFC	8	39	478.2387914608462	954.4630299884924	2	478.2405700683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GKWITTFC_	ENSG00000095110|ENST00000534921|NXPE1;nc|ENSG00000095110|Q8N323-2|NXPE1	53.351449002276354	0.5676011784961348	3				NaN	NaN	0	NaN	7300	5094	12394
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12413	36.653	NaN	1118.3	30	0	462.08	0.214	+			44067	TPSQPLPTY	9	31	502.2587514387702	NaN	0	502.25921630859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TPSQPLPTY_	ENSG00000173821|ENST00000582970|RNF213;nc|ENSG00000173821|Q63HN8-4|RNF213;nc|ENSG00000173821|Q63HN8|RNF213;RNF213|p.C5022Lfs*7|1|0.3|ENSG00000173821|chr17:80389237-80389237|G/-|frameshift_variant;RNF213|p.P2167Lfs*64|1|0.09|ENSG00000173821|chr17:80344834-80344835|-/T|frameshift_variant;RNF213|p.Q1953Rfs*50|2|0.13|ENSG00000173821|chr17:80340219-80340219|C/-|frameshift_variant	44.377184641726394	0.24544280798894275	3				NaN	NaN	0	NaN	7311	5100	12412
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12414	36.657	NaN	1250.5	30	0	196.75	0.035			+	37852	SNNDANKKF	9	51	519.2547767446987	1036.4950005561973	2	519.257568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SNNDANKKF_	REV__ENSG00000173230|ENST00000614479|GOLGB1;REV__GOLGB1|p.D2495Tfs*21|1|0.22|ENSG00000173230|chr3:121691867-121691867|T/-|frameshift_variant;REV__GOLGB1|p.E1174Gfs*19|1|0.24|ENSG00000173230|chr3:121696989-121696990|-/T|frameshift_variant;REV__GOLGB1|p.E1375Sfs*20|1|0.04|ENSG00000173230|chr3:121696385-121696386|-/TGGA|frameshift_variant;REV__GOLGB1|p.E1375Vfs*20|1|0.02|ENSG00000173230|chr3:121696386-121696387|-/AACTTAGTGAGAAAGAAGCAGCTCTCACT|frameshift_variant;REV__GOLGB1|p.K2450Rfs*27|1|0.37|ENSG00000173230|chr3:121692000-121692000|T/-|frameshift_variant;REV__GOLGB1|p.Q2186Sfs*19|1|0.31|ENSG00000173230|chr3:121693952-121693952|G/-|frameshift_variant;REV__GOLGB1|p.S1501Vfs*38|1|0.2|ENSG00000173230|chr3:121696007-121696007|T/-|frameshift_variant;REV__nc|ENSG00000173230|Q14789-2|GOLGB1;REV__nc|ENSG00000173230|Q14789-3|GOLGB1;REV__nc|ENSG00000173230|Q14789-4|GOLGB1;REV__nc|ENSG00000173230|Q14789|GOLGB1	82.24051045832904	0.08786059719216216	3				NaN	NaN	0	NaN	7312	5100	12412
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12431	36.708	NaN	2497.6	30	0	466.06	0.142	+			11797	FSREADAR	8	44	476.23613212100844	950.4577113088169	2	476.237548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FSREADAR_	ENST00000544158.2_1_19:36259282-36259444:+|nuORF	53.351449002276354	0.5676011784961348	3				NaN	NaN	0	NaN	7320	5109	12430
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12438	36.728	NaN	839.94	30	0	260.19	0.142			+	48481	VTLVKGSLP	9	30	457.28965686626015	NaN	0	457.2894287109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTLVKGSLP_	REV__ENSG00000188991|ENST00000344941|SLC15A5	16.473147378115264	0.38122769658151995	3				NaN	NaN	0	NaN	7324	5112	12437
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12448	36.762	NaN	3922.8	30	0	1139.6	0.214				-1	 	0	57	515.8092707358596	1029.6039885385192	2	515.8114013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7328	5118	12447
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12449	36.765	NaN	1354.5	30	0	416.23	0.03				-1	 	0	23	336.2067697482749	670.3989865633498	2	336.2081604003906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7329	5118	12447
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12486	36.887	NaN	1460	30	0	330.72	0.142			+	37720	SLSVSLWGL	9	44	481.27152286446136	960.5284927957227	2	481.2734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLSVSLWGL_	REV__ENST00000561623.5_1_16:27472048-27472405:-|nuORF	45.9519527083369	0.35044536499095585	3				NaN	NaN	0	NaN	7345	5139	12485
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12515	36.981	NaN	1723.4	30	0	302.86	0.214	+			13499	GLMKIYVLQ	9	56	540.8101590257984	NaN	0	540.810302734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_GLM(Oxidation (M))KIYVLQ_	ENSG00000182963|ENST00000592524|GJC1	44.116797842482775	0.2472372736944149	3				NaN	NaN	0	NaN	7359	5154	12514
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12516	36.985	NaN	1511.1	30	0	416.58	0.034			+	41119	SVISKPITV	9	53	472.29449658893367	NaN	0	472.2950439453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVISKPITV_	REV__ENSG00000198452|ENST00000641545|OR14L1P;REV__ENST00000419087.1_1_1:247782982-247783861:+|nuORF	39.252832667884924	0.27938773122138094	3				NaN	NaN	0	NaN	7360	5154	12514
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12536	37.041	NaN	4519.9	30	0	960.98	0.143	+			46141	VDMYLKDK	8	61	506.2628315183567	1010.5111101035134	2	506.2646789550781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VDMYLKDK_	ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A;TOP2A|p.K1199Efs*11|1|0.23|ENSG00000131747|chr17:40396408-40396409|-/C|frameshift_variant;TOP2A|p.T1205Hfs*19|4|0.35|ENSG00000131747|chr17:40396390-40396390|T/-|frameshift_variant	71.29570347882199	0.39610197767395533	3				NaN	NaN	0	NaN	7371	5163	12535
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12597	37.241	NaN	1962.8	30	0	432.4	0.214	+			23553	LAKVGIAL	8	41	392.7681773448074	NaN	0	392.76837158203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LAKVGIAL_	ENSG00000089154|ENST00000300648|GCN1	119.22118168366049	1.7418937515398478	3				NaN	NaN	0	NaN	7399	5196	12596
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12598	37.244	NaN	2035.9	30	0	368.56	0.106				-1	 	0	52	483.2671413796851	964.5197298261702	2	483.2689208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7400	5196	12596
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12599	37.246	NaN	1376.5	30	0	192.67	0.036	+			27370	MKDDVIKKV	9	49	546.3144481427894	NaN	0	546.3151245117188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))KDDVIKKV_	tr|U7T386|U7T386_FUSNUCelldivisionproteinFtsAOS=FusobacteriumnucleatumCTI-5OX=1316586GN=ftsAPE=3SV=1	45.97224482568171	0.23445038899310136	3				NaN	NaN	0	NaN	7401	5196	12596
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12611	37.282	NaN	5151.3	30	0	2839.9	0.214	+			18803	ITSSFQKSR	9	60	527.2883345709299	1052.5621162086597	2	527.290283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ITSSFQKSR_	tr|U7SMR1|U7SMR1_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01792PE=4SV=1	47.657333605630114	0.33044192980041115	3				NaN	NaN	0	NaN	7407	5202	12610
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12612	37.286	NaN	2762.3	30	0	973.26	0.034	+			27869	MTIPPRFS	8	41	474.75180615053716	947.4890593678743	2	474.7529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MTIPPRFS_	PLK1|p.L319M|1|0.23|ENSG00000166851|chr16:23684008-23684008|C/A|missense_variant	53.351449002276354	0.5676011784961348	3				NaN	NaN	0	NaN	7408	5202	12610
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12623	37.319	NaN	813.13	30	0	174.17	0.141	+			50520	YAPSGNFV	8	33	427.705810546875	NaN	0	427.705810546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YAPSGNFV_	ENSG00000111664|ENST00000229264|GNB3;ENSG00000172354|ENST00000303210|GNB2;ENST00000470354.1_1_7:100275135-100275402:+|nuORF;nc|ENSG00000111664|P16520-2|GNB3;nc|ENSG00000172354|P62879-2|GNB2	53.351449002276354	1.7418937515398478	3				NaN	NaN	0	NaN	7413	5208	12622
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12657	37.438	NaN	1330.7	30	0	284.76	0.142	+			6989	CQIPHFLL	8	37	485.76403571478954	NaN	0	485.7635803222656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CQIPHFLL_	ENST00000328194.7_2_11:9160490-9160769:-|nuORF	29.14955571784316	1.7418937515398478	3				NaN	NaN	0	NaN	7426	5229	12656
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12751	37.741	NaN	1562	30	0	312.77	0.143	+			16268	HEGDIILKI	9	53	519.3042743976952	NaN	0	519.303955078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HEGDIILKI_	ENSG00000119139|ENST00000377245|TJP2;nc|ENSG00000119139|Q9UDY2-2|TJP2;nc|ENSG00000119139|Q9UDY2-3|TJP2;nc|ENSG00000119139|Q9UDY2-4|TJP2;nc|ENSG00000119139|Q9UDY2-5|TJP2;nc|ENSG00000119139|Q9UDY2-6|TJP2;nc|ENSG00000119139|Q9UDY2-7|TJP2;TJP2|p.F813Sfs*12|1|0.23|ENSG00000119139|chr9:69240013-69240013|T/-|frameshift_variant;TJP2|p.P484Qfs*30|1|0.18|ENSG00000119139|chr9:69228107-69228107|C/-|frameshift_variant;TJP2|p.T849Rfs*12|1|0.32|ENSG00000119139|chr9:69240120-69240120|A/-|frameshift_variant	51.52775601994872	0.19616436856719055	3				NaN	NaN	0	NaN	7472	5277	12750
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12780	37.842	NaN	752.38	30	0	140.85	0.142	+			35072	SAFGVIIEK	9	37	482.2793337516727	NaN	0	482.2793884277344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAFGVIIEK_	ENSG00000178440|ENST00000651763|TIMM23B-AGAP6;ENSG00000204152|ENST00000651259|TIMM23B;ENSG00000265354|ENST00000580018|TIMM23;nc|ENSG00000204152|Q5SRD1-2|TIMM23B	59.93077597824379	0.14961415694175798	3				NaN	NaN	0	NaN	7483	5295	12779
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12789	37.876	NaN	2642	30	0	368.22	0.142				-1	 	0	45	466.2461827395655	930.477812545931	2	466.7492370605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7486	5301	12788
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12812	37.948	NaN	4054.1	30	0	768.46	0.144			+	11335	FLDQLTVFQ	9	61	555.7954031115663	1109.5762532899325	2	555.7981567382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FLDQLTVFQ_	REV__ENST00000371429.3_1_1:54231171-54231309:-|nuORF	79.45101966838831	0.09992237243120712	3				NaN	NaN	0	NaN	7497	5313	12811
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12829	38.002	NaN	837.67	30	0	78.187	0.142				-1	LTMQITAL	8	45	453.7510681152344	NaN	0	453.7510681152344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LTM(Oxidation (M))QITAL_	EEA1|p.N1389Mfs*3|1|0.33|ENSG00000102189|chr12:92776081-92776081|T/-|frameshift_variant;ENSG00000102189|ENST00000322349|EEA1	73.97473282117947	1.7418937515398478	3				NaN	NaN	0	NaN	7505	5322	12828
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12854	38.09	NaN	707.11	30	0	174.45	0.142	+			40837	SVELPIVGK	9	37	471.28753892450135	NaN	0	471.28753662109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVELPIVGK_	ENSG00000240849|ENST00000371652|PEDS1;ENST00000453505.6_1_20:48741597-48767785:-|nuORF	47.657333605630114	0.2228375344433429	3				NaN	NaN	0	NaN	7515	5337	12853
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12873	38.149	NaN	1184.2	30	0	280.26	0.144			+	28082	NAETKTLEKS	10	41	560.7965936822928	1119.5786344313856	2	560.7992553710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAETKTLEKS_	REV__nc|ENSG00000136603|P12757-3|SKIL	22.579656572578934	0.6954366826851017	3				NaN	NaN	0	NaN	7525	5346	12872
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12963	38.432	NaN	4845.1	30	0	1741.5	0.142	+			41535	SVQAPRKR	8	47	471.2852912287159	940.5560295242318	2	471.287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVQAPRKR_	ENST00000444265.6_1_6:22205474-22214638:+|nuORF	38.80614096846853	0.6637206697844082	3				NaN	NaN	0	NaN	7570	5391	12962
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12983	38.491	NaN	656.1	30	0	92.483	0.143	+			14273	GSVELPIVGK	10	32	499.7979469747947	NaN	0	499.7969970703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSVELPIVGK_	ENSG00000240849|ENST00000371652|PEDS1;ENST00000453505.6_1_20:48741597-48767785:-|nuORF	72.87924865735499	0.13450315462291293	3				NaN	NaN	0	NaN	7581	5400	12982
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13064	38.776	NaN	1045.2	30	0	433.31	0.214				-1	 	0	30	443.2907991659078	884.5670453986156	2	443.2923278808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7614	5448	13063
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13065	38.78	NaN	1593.8	30	0	434.72	0.106	+			25668	LRDHLTAR	8	46	491.28300873204853	980.5514645308971	2	491.2846984863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LRDHLTAR_	ENSG00000188039|ENST00000524140|NWD1;ENST00000438489.6_1_19:16849058-16926137:+|nuORF;nc|ENSG00000188039|Q149M9|NWD1;NWD1|p.L337Wfs*14|2|0.28|ENSG00000188039|chr19:16749646-16749646|C/-|frameshift_variant;NWD1|p.N1368Kfs*41|1|0.32|ENSG00000188039|chr19:16807950-16807951|-/A|frameshift_variant	49.44154591367651	0.597725784090933	3				NaN	NaN	0	NaN	7615	5448	13063
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13066	38.782	NaN	913.48	30	0	151.34	0.034				-1	 	0	36	471.2852912287159	940.5560295242318	2	471.2867431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7616	5448	13063
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13132	39.025	NaN	1025.3	30	0	156.6	0.144			+	29960	PNKYTAEVF	9	45	534.7725031095003	NaN	0	534.7732543945312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PNKYTAEVF_	REV__ENSG00000171109|ENST00000471841|MFN1;REV__MFN1|p.H221Tfs*3|1|0.27|ENSG00000171109|chr3:179365127-179365127|T/-|frameshift_variant;REV__nc|ENSG00000171109|Q8IWA4-2|MFN1;REV__nc|ENSG00000171109|Q8IWA4-3|MFN1	40.5726180659479	0.27166212580479165	3				NaN	NaN	0	NaN	7640	5490	13131
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13139	39.045	NaN	3036	30	0	459.93	0.143			+	21793	KQVPENVAN	9	54	499.7676196487347	997.5206863642694	2	499.76910400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KQVPENVAN_	REV__ENSG00000048707|ENST00000620676|VPS13D;REV__nc|ENSG00000048707|Q5THJ4-2|VPS13D;REV__VPS13D|p.K3964Nfs*34|1|0.09|ENSG00000048707|chr1:12403831-12403831|A/-|frameshift_variant	54.776311868738084	0.25715957988447635	3				NaN	NaN	0	NaN	7644	5493	13138
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13145	39.063	NaN	1048.1	30	0	286.8	0.141	+			46222	VEALIHAI	8	35	433.25950807256174	864.5044632119235	2	433.2613830566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VEALIHAI_	ENSG00000173801|ENST00000393931|JUP	44.53106598305862	0.628196326904373	3				NaN	NaN	0	NaN	7647	5496	13144
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13157	39.101	NaN	3677.9	30	0	982.96	0.143			+	1337	AETLRLHR	8	48	498.29051426951617	994.5664756058324	2	498.2928771972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AETLRLHR_	REV__ENSG00000168286|ENST00000303596|THAP11	30.503639358989545	0.7238069182250283	3				NaN	NaN	0	NaN	7653	5502	13156
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13184	39.19	NaN	593.61	30	0	94.8	0.143	+			40627	SVALLTFGGI	10	41	489.28693736604856	NaN	0	489.2870178222656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVALLTFGGI_	SLC7A10|p.S325L|1|0.3|ENSG00000130876|chr19:33211267-33211267|G/A|missense_variant	26.69291269510374	0.4125295221340092	3				NaN	NaN	0	NaN	7665	5517	13183
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13215	39.293	NaN	1004.2	30	0	178.75	0.143	+			50389	YAAEYANAL	9	44	493.23529052734375	NaN	0	493.23529052734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YAAEYANAL_	ENSG00000140274|ENST00000323030|DUOXA2	62.107414245175825	0.1403307765918332	3				NaN	NaN	0	NaN	7678	5535	13214
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13296	39.577	NaN	2586.2	30	0	1189.8	0.144	+			29110	NTQDVLIFK	9	49	539.2993674457141	1076.584181958228	2	539.301513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NTQDVLIFK_	ENSG00000156958|ENST00000560031|GALK2;nc|ENSG00000156958|Q01415-2|GALK2	59.93077597824379	0.21419174904018318	3				NaN	NaN	0	NaN	7711	5583	13295
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13320	39.642	NaN	1199.6	30	0	133.66	0.142	+			42723	TDGKVFQF	8	50	471.2403054698662	NaN	0	471.24029541015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TDGKVFQF_	ENSG00000114391|ENST00000394077|RPL24	66.42927471994793	1.7418937515398478	3				NaN	NaN	0	NaN	7726	5592	13319
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13348	39.745	NaN	2201.9	30	0	585.68	0.143				-1	 	0	53	497.28310397179604	992.5516550103921	2	497.2839660644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7736	5610	13347
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13358	39.779	NaN	1616.7	30	0	280.19	0.143	+			23398	LAAHQLINY	9	43	521.7861942528903	1041.5578355725804	2	521.790283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LAAHQLINY_	ENST00000382031.5_1_15:43812898-43813209:+|nuORF	47.91560031466742	0.327412564698279	3				NaN	NaN	0	NaN	7740	5616	13357
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13378	39.847	NaN	3289.6	30	0	451.3	0.143				-1	 	0	51	490.29347010842736	978.5723872836547	2	490.29522705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7748	5628	13377
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13434	40.072	NaN	4316.4	30	0	1589.4	0.142				-1	 	0	42	478.329666670333	954.644780407466	2	478.3314514160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7765	5667	13433
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13443	40.107	NaN	637.46	30	0	77.965	0.141	+			36994	SIPGGYNAL	9	38	446.23199462890625	NaN	0	446.23199462890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIPGGYNAL_	ENSG00000135018|ENST00000376395|UBQLN1;ENSG00000160803|ENST00000368309|UBQLN4;ENSG00000188021|ENST00000338222|UBQLN2;ENST00000533705.5_1_9:86284090-86294929:-|nuORF;nc|ENSG00000135018|Q9UMX0-2|UBQLN1;nc|ENSG00000135018|Q9UMX0-3|UBQLN1;UBQLN2|p.N281Sfs*92|1|0.34|ENSG00000188021|chrX:56564713-56564725|GAATGCCGCACAA/-|frameshift_variant;UBQLN2|p.P525Lfs*71|10|0.37|ENSG00000188021|chrX:56565441-56565441|C/-|frameshift_variant;UBQLN4|p.A385Pfs*7|1|0.03|ENSG00000160803|chr1:156042886-156042887|GC/-|frameshift_variant;UBQLN4|p.R283H|1|0.14|ENSG00000160803|chr1:156048553-156048553|C/T|missense_variant	68.78682469695295	0.1118430353446351	3				NaN	NaN	0	NaN	7768	5673	13442
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13477	40.22	NaN	1820	30	0	770.38	0.214			+	34606	RVPDRSRY	8	43	524.7853538070738	1047.5561546809474	2	524.7877197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVPDRSRY_	REV__ENSG00000011143|ENST00000393119|MKS1;REV__MKS1|p.F377Lfs*53|1|0.3|ENSG00000011143|chr17:58208139-58208139|A/-|frameshift_variant;REV__MKS1|p.P200Lfs*29|1|0.09|ENSG00000011143|chr17:58214304-58214304|G/-|frameshift_variant;REV__nc|ENSG00000011143|Q9NXB0-2|MKS1	31.954861631926434	0.7126016770032289	3				NaN	NaN	0	NaN	7784	5691	13476
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13478	40.224	NaN	2068.6	30	0	219.73	0.035	+			28039	NAAKVFNLY	9	63	520.2811357258169	1038.5477185184336	2	520.2835083007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NAAKVFNLY_	ENSG00000092964|ENST00000521913|DPYSL2;nc|ENSG00000092964|Q16555-2|DPYSL2;nc|ENSG00000092964|Q16555|DPYSL2	98.58198989935565	0.04066992115528678	3				NaN	NaN	0	NaN	7785	5691	13476
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13501	40.31	NaN	3402.5	30	0	883.21	0.142	+			11865	FTDPKLAL	8	42	452.7603911057757	903.5062292783514	2	452.7621154785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FTDPKLAL_	ENSG00000131781|ENST00000254090|FMO5	76.7741389293348	0.3504530765139327	3				NaN	NaN	0	NaN	7793	5706	13500
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13536	40.443	NaN	1267.8	30	0	234.18	0.214	+			28817	NPLEETSAL	9	35	487.2459121136813	NaN	0	487.24517822265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NPLEETSAL_	ENSG00000176945|ENST00000447234|MUC20;ENST00000457750.1_1_3:195341833-195346985:+|nuORF;nc|ENSG00000176945|Q8N307-3|MUC20	54.776311868738084	0.17377682019723872	3				NaN	NaN	0	NaN	7804	5730	13535
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13537	40.446	NaN	1085.7	30	0	228.39	0.106	+			37768	SLVSQFYL	8	39	478.75628217101763	955.4980114088353	2	478.75872802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLVSQFYL_	ENST00000433566.8_1_8:21827771-21829435:+|nuORF	40.77816245573522	0.6514838689002179	3				NaN	NaN	0	NaN	7805	5730	13535
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13538	40.448	NaN	1127.8	30	0	204.07	0.033	+			1641	AGPESSLAL	9	29	422.72438208563784	NaN	0	422.724365234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AGPESSLAL_	DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;nc|ENSG00000187908|Q9UGM3-2|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-4|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-8|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1	44.116797842482775	0.2472372736944149	3				NaN	NaN	0	NaN	7806	5730	13535
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13613	40.725	NaN	2520.5	30	0	292.82	0.143			+	22153	KSRLRNTY	8	54	519.2957832593271	1036.577013585454	2	519.2974853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSRLRNTY_	REV__ENSG00000115760|ENST00000421745|BIRC6;REV__ENST00000470250.1_1_2:32800383-32819219:+|nuORF	73.97473282117947	0.3737790450121076	3				NaN	NaN	0	NaN	7833	5778	13612
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13792	41.543	NaN	1731.4	30	0	501.84	0.142				-1	GRLLCTVM	8	41	483.24899641860776	964.4834399040155	2	483.2507629394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_GRLLC(Carbamidomethyl (C))TVM(Oxidation (M))_	ENST00000417581.1_1_10:30637795-30637855:-|nuORF	47.91560031466742	0.6071945918984287	3				NaN	NaN	0	NaN	7886	5904	13791
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13825	41.693	NaN	1292.5	30	0	196.41	0.144	+			27519	MPAAQEGAVAF	11	35	546.2618126555744	1090.5090723779488	2	546.765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MPAAQEGAVAF_	ENSG00000231925|ENST00000434618|TAPBP;ENST00000480730.5_1_6:33272736-33281818:-|nuORF;nc|ENSG00000231925|O15533-2|TAPBP;nc|ENSG00000231925|O15533-3|TAPBP;nc|ENSG00000231925|O15533-4|TAPBP	40.05817265558897	0.5571470695993369	3				NaN	NaN	0	NaN	7892	5931	13824
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13864	41.89	NaN	979.41	30	0	299.03	0.144	+			28639	NLEELFQVK	9	41	560.3071899414062	NaN	0	560.3071899414062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NLEELFQVK_	ENSG00000128849|ENST00000281282|CGNL1	26.063383197487333	0.34597851983111116	3				NaN	NaN	0	NaN	7895	5967	13863
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13961	42.332	NaN	2666.8	30	0	1310.2	0.144			+	51133	YNKKEATKQ	9	54	555.3018699529964	1108.5891869727927	2	555.30419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YNKKEATKQ_	REV__ENSG00000100503|ENST00000530997|NIN;REV__ENST00000476352.5_1_14:51190183-51197646:-|nuORF;REV__nc|ENSG00000100503|Q8N4C6-10|NIN	20.94693142431847	0.6074874384046576	3				NaN	NaN	0	NaN	7911	6048	13960
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14030	42.614	NaN	1100.8	30	0	179.31	0.143	+			30744	QDLLQLQY	8	40	510.7719474793344	NaN	0	510.7720031738281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QDLLQLQY_	ENSG00000140575|ENST00000268182|IQGAP1;ENSG00000183856|ENST00000361170|IQGAP3;ENST00000561086.1_1_15:91040446-91043337:+|nuORF	53.351449002276354	1.7418937515398478	3				NaN	NaN	0	NaN	7929	6099	14029
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14086	42.874	NaN	1173.3	30	0	230.85	0.142	+			11636	FQGASNLTL	9	34	475.75091083076427	NaN	0	475.7520446777344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FQGASNLTL_	DDX18|p.K110Efs*11|1|0.42|ENSG00000088205|chr2:117817678-117817679|-/A|frameshift_variant;ENSG00000088205|ENST00000263239|DDX18	56.43379154798735	0.16452882468284893	3				NaN	NaN	0	NaN	7937	6147	14085
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14684	45.682	NaN	1442.2	30	0	296.4	0.143	+			41301	SVLNLVIVK	9	47	492.8252690859441	983.6359852386882	2	492.8262023925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVLNLVIVK_	ENSG00000137154|ENST00000380394|RPS6;ENST00000464444.1_1_19:13005132-13005321:+|nuORF	136.26810882979174	0.012230845423532208	3				NaN	NaN	0	NaN	8007	6675	14683
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15115	47.785	NaN	1610.9	30	0	342.95	0.14	+			43568	TIASIILS	8	31	409.25528129174785	NaN	0	409.2551574707031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TIASIILS_	tr|U7SV29|U7SV29_FUSNUEamAdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01107PE=4SV=1	42.47446043378293	1.7418937515398478	3				NaN	NaN	0	NaN	8036	7077	15114
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2058	10.663	NaN	628.42	30	0	98.614	0.145	+			22290	KTDPSAAGRKK	11	26	579.8345336914062	NaN	0	579.8345336914062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTDPSAAGRKK_	ENSG00000183495|ENST00000389561|EP400;EP400|p.P2793Rfs*46|1|0.3|ENSG00000183495|chr12:132064707-132064707|C/-|frameshift_variant;nc|ENSG00000183495|Q96L91-3|EP400;nc|ENSG00000183495|Q96L91-4|EP400;nc|ENSG00000183495|Q96L91-5|EP400;nc|ENSG00000183495|Q96L91|EP400	37.59989570853033	0.39784920612721525	3				NaN	NaN	0	NaN	8	2048	2057
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2160	11.264	NaN	3060.8	30	0	830.78	0.144	+			22897	KVMKDAKTK	9	53	524.8134718538944	1047.6123907745887	2	525.3155517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVMKDAKTK_	ENSG00000198900|ENST00000361337|TOP1	125.71293069911285	0.017741295328254008	3				NaN	NaN	0	NaN	11	2147	2159
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2179	11.343	NaN	19212	30	0	13307	0.214	+			4843	ATPKKSIKK	9	45	500.83010165981887	999.6456503864378	2	500.8296813964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATPKKSIKK_	ENSG00000124575|ENST00000244534|H1-3	94.4091291819064	0.0524345700464502	3				NaN	NaN	0	NaN	15	2162	2178
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2180	11.347	NaN	21801	30	0	14478	0.106			+	46366	VEKVAKAKK	9	42	334.2222313681132	999.6448647045397	3	334.22210693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VEKVAKAKK_	REV__ENSG00000171467|ENST00000361428|ZNF318;REV__ZNF318|p.A1247Lfs*13|1|0.36|ENSG00000171467|chr6:43340260-43340260|T/-|frameshift_variant;REV__ZNF318|p.T1649Lfs*8|1|0.04|ENSG00000171467|chr6:43339053-43339054|-/GACACTAG|frameshift_variant;REV__ZNF318|p.T2157Qfs*54|1|0.39|ENSG00000171467|chr6:43337529-43337529|T/-|frameshift_variant	37.81151784470057	0.4459294069877048	3				NaN	NaN	0	NaN	16	2162	2178
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2181	11.349	NaN	5330.9	30	0	1534.1	0.106	+			29822	PKPKGIKKS	9	41	328.21874561397146	981.6344074421145	3	328.2186584472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PKPKGIKKS_	ENST00000379310.7_2_13:42141480-42141777:-|nuORF	16.473147378115264	0.6112419832031293	3				NaN	NaN	0	NaN	17	2162	2178
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2182	11.351	NaN	1096.5	30	0	144.27	0.036	+			31794	QPLQLQTAEA	10	26	549.7910328417241	NaN	0	549.7918701171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QPLQLQTAEA_	ENST00000220913.9_1_8:141525461-141525764:+|nuORF	19.1035232394073	0.4201028297492154	3				NaN	NaN	0	NaN	18	2162	2178
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2190	11.38	NaN	1011.6	30	0	206.45	0.142	+			2016	AKLSNHKK	8	33	463.2833721901832	924.5521914471664	2	463.2824401855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AKLSNHKK_	tr|U7SKH4|U7SKH4_FUSNUCys-tRNA(Pro)/Cys-tRNA(Cys)deacylaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01993PE=3SV=1	27.882242232435846	0.7440473649773525	3				NaN	NaN	0	NaN	20	2168	2189
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2203	11.442	NaN	1224.6	30	0	282.56	0.144	+			42886	TEHAKRKTV	9	34	535.3103637695312	NaN	0	535.3103637695312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEHAKRKTV_	ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000275663|ENST00000611444|H4C7;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2	25.57405402267927	0.3484490411150625	3				NaN	NaN	0	NaN	21	2180	2202
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2238	11.612	NaN	5719	30	0	1970.1	0.142	+			19732	KDTSQLKK	8	54	474.2798984408979	946.5452439485958	2	474.279541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KDTSQLKK_	ENSG00000122507|ENST00000242067|BBS9;ENST00000495426.1_1_7:33545212-33573811:+|nuORF;nc|ENSG00000122507|Q3SYG4-2|BBS9;nc|ENSG00000122507|Q3SYG4-3|BBS9;nc|ENSG00000122507|Q3SYG4-4|BBS9;nc|ENSG00000122507|Q3SYG4-7|BBS9	82.30502934623384	0.30436709589983096	3				NaN	NaN	0	NaN	23	2213	2237
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2254	11.657	NaN	14317	30	0	4524.1	0.214				-1	 	0	71	485.2709294517545	968.527305970309	2	485.27032470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	33	2219	2253
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2255	11.66	NaN	8649.4	30	0	3611.4	0.106			+	19609	KDFVVQSY	8	48	493.2543890453006	984.4942251574013	2	493.25396728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KDFVVQSY_	REV__L1MC1_dup2138|chr3:11203375-11203979:-|1.868897465743888|0.2278259033593264|3.04|481.0|10|2|sense	42.47446043378293	0.6409579893742323	3				NaN	NaN	0	NaN	34	2219	2253
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2256	11.662	NaN	545.88	30	0	187.99	0.106			+	-1	KKCLELEL	8	25	516.7938232421875	NaN	0	516.7938232421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_KKC(Carbamidomethyl (C))LELEL_	REV__ENSG00000198825|ENST00000650623|INPP5F;REV__INPP5F|p.A917Qfs*71|1|0.07|ENSG00000198825|chr10:119827129-119827130|-/CAGAGTG|frameshift_variant;REV__INPP5F|p.K483Nfs*2|1|0.19|ENSG00000198825|chr10:119807935-119807935|A/-|frameshift_variant;REV__INPP5F|p.P263Lfs*7|1|0.35|ENSG00000198825|chr10:119796827-119796827|C/-|frameshift_variant;REV__INPP5F|p.W211Gfs*5|1|0.37|ENSG00000198825|chr10:119792169-119792169|T/-|frameshift_variant;REV__nc|ENSG00000198825|Q9Y2H2-2|INPP5F;REV__nc|ENSG00000198825|Q9Y2H2-3|INPP5F	25.450171626174864	1.7418937515398478	3				NaN	NaN	0	NaN	35	2219	2253
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2257	11.664	NaN	27059	30	0	5223.4	0.106			+	21101	KKQTNKKK	8	74	501.82480438121206	1001.6350558292241	2	501.8247985839844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KKQTNKKK_	REV__ENST00000395442.5_1_10:55568369-55568990:-|nuORF	115.49404669440601	0.24099756539272307	3				NaN	NaN	0	NaN	36	2219	2253
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2258	11.666	NaN	7180	30	0	1700.1	0.106	+			38684	SSKDAIKK	8	54	438.7612312464844	875.5079095597688	2	438.7607116699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSKDAIKK_	DSTN|p.Y117H|1|0.26|ENSG00000125868|chr20:17604592-17604592|T/C|missense_variant;ENSG00000125868|ENST00000246069|DSTN;ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000400899.2_1_1:11051144-11051557:-|nuORF;ENST00000530945.1_1_11:65623104-65623215:-|nuORF;ENST00000602547.1_1_12:6994092-6994545:+|nuORF;nc|ENSG00000125868|P60981-2|DSTN;nc|ENSG00000165410|Q9Y281-3|CFL2	127.46168284122857	0.2238874366747666	3				NaN	NaN	0	NaN	37	2219	2253
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2259	11.668	NaN	3731.4	30	0	941.64	0.036			+	-1	LREICSYK	8	35	534.7796767358154	NaN	0	534.780517578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_LREIC(Carbamidomethyl (C))SYK_	REV__ZNF536|p.S500Y|1|0.5|ENSG00000198597|chr19:30445061-30445061|C/A|missense_variant	20.94693142431847	1.7418937515398478	3				NaN	NaN	0	NaN	38	2219	2253
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2271	11.692	NaN	51458	30	0	28412	0.214	+			34431	RTVGVSKKK	9	88	334.88562639750944	1001.6350497927283	3	334.8853759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTVGVSKKK_	ENSG00000231500|ENST00000439602|RPS18;ENST00000412454.1_1_17:14608395-14608521:-|nuORF	112.10723106719422	0.02684780151337622	3				NaN	NaN	0	NaN	47	2222	2270
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2272	11.696	NaN	1932.6	30	0	926.33	0.106				-1	 	0	26	323.7160464051193	645.4175398770386	2	323.71575927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	48	2222	2270
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2273	11.698	NaN	2351.5	30	0	584.29	0.106			+	-1	CWLSQAAPQ	9	29	523.2404824492154	NaN	0	523.240478515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))CWLSQAAPQ_	REV__ENST00000332065.9_1_17:74078001-74078805:-|nuORF	27.882242232435846	0.3367954786602879	3				NaN	NaN	0	NaN	49	2222	2270
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2274	11.699	NaN	2316.4	30	0	628.11	0.106	+			47119	VLNGPLILW	9	36	512.814259034959	1023.6139651367181	2	512.8145751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VLNGPLILW_	ENSG00000181544|ENST00000650831|FANCB;FANCB|p.I419Lfs*7|1|0.08|ENSG00000181544|chrX:14853110-14853111|-/TATTTAAATTGGAATATTAG|frameshift_variant;FANCB|p.I419Tfs*9|1|0.08|ENSG00000181544|chrX:14853109-14853110|-/AG|frameshift_variant	19.359975847455235	0.6112419832031293	3				NaN	NaN	0	NaN	50	2222	2270
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2275	11.701	NaN	1296.7	30	0	813.02	0.106	+			32681	RAFKTFSAL	9	15	520.7985686557719	NaN	0	520.7986450195312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RAFKTFSAL_	ENSG00000183638|ENST00000382483|RP1L1;nc|ENSG00000183638|Q8IWN7-2|RP1L1;RP1L1|p.G2243Rfs*6|1|0.25|ENSG00000183638|chr8:10607371-10607372|-/T|frameshift_variant;RP1L1|p.V381Cfs*109|1|0.28|ENSG00000183638|chr8:10612957-10612957|C/-|frameshift_variant	7.193352174278301	0.40727630907727536	3				NaN	NaN	0	NaN	51	2222	2270
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2276	11.703	NaN	704.65	30	0	162.85	0.032			+	12237	GASKSIKV	8	30	395.2449035644531	NaN	0	395.2449035644531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GASKSIKV_	REV__ENSG00000136813|ENST00000684092|ECPAS;REV__nc|ENSG00000136813|Q5VYK3|ECPAS	57.81127852772723	1.7418937515398478	3				NaN	NaN	0	NaN	52	2222	2270
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2277	11.704	NaN	286.8	30	0	51.282	0.139	+			21756	KQQAALSAL	9	18	465.2729187011719	NaN	0	465.2729187011719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KQQAALSAL_	ADAD2|p.L200*|1|0.19|ENSG00000140955|chr16:84194966-84194966|C/-|frameshift_variant;ADAD2|p.T355Pfs*22|1|0.26|ENSG00000140955|chr16:84195819-84195819|C/-|frameshift_variant;ENSG00000140955|ENST00000315906|ADAD2;nc|ENSG00000140955|Q8NCV1-2|ADAD2	21.9598887501803	0.3626577482100488	3				NaN	NaN	0	NaN	53	2222	2270
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2288	11.73	NaN	9807.2	30	0	1306.6	0.214	+			21678	KQDSNNKK	8	66	481.2571574064137	960.4997618796274	2	481.25665283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KQDSNNKK_	ENSG00000174948|ENST00000389740|GPR149;GPR149|p.I582Nfs*6|1|0.33|ENSG00000174948|chr3:154338150-154338151|-/T|frameshift_variant	102.7733458925114	0.2491487235419157	3				NaN	NaN	0	NaN	61	2225	2287
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2289	11.734	NaN	4826.2	30	0	1815	0.033	+			34935	SAAKAVKPK	9	55	450.2877065403703	898.5608601475407	2	450.2869873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAAKAVKPK_	ENSG00000187837|ENST00000343677|H1-2	93.1432384553994	0.056003526918089595	3				NaN	NaN	0	NaN	62	2225	2287
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2299	11.778	NaN	1564.5	30	0	470.97	0.141	+			14656	GTIAKSGTK	9	42	431.7533350142675	NaN	0	431.75335693359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTIAKSGTK_	ENSG00000080824|ENST00000216281|HSP90AA1;ENSG00000096384|ENST00000371646|HSP90AB1;HSP90AA1|p.K419Nfs*3|1|0.25|ENSG00000080824|chr14:102083874-102083874|T/-|frameshift_variant;HSP90AA1|p.S330Qfs*48|1|0.21|ENSG00000080824|chr14:102084558-102084558|A/-|frameshift_variant;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000224411|Q14568|HSP90AA2P	78.26377905018397	0.07733306720594871	3				NaN	NaN	0	NaN	63	2234	2298
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2316	11.856	NaN	2755.3	30	0	298.74	0.144	+			38992	SSSEPVHAKK	10	63	535.2866042248302	1068.5586555164602	2	535.2864990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSSEPVHAKK_	ENSG00000173145|ENST00000371361|NOC3L;NOC3L|p.K235Nfs*2|1|0.43|ENSG00000173145|chr10:94353049-94353049|T/-|frameshift_variant;NOC3L|p.L425Yfs*3|1|0.14|ENSG00000173145|chr10:94346540-94346540|A/-|frameshift_variant;NOC3L|p.T423Hfs*5|1|0.09|ENSG00000173145|chr10:94346547-94346547|T/-|frameshift_variant	122.93914200107957	0.02317863035582428	3				NaN	NaN	0	NaN	65	2249	2315
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2324	11.889	NaN	6810.8	30	0	1869.7	0.144			+	38706	SSKSVHLSQP	10	31	357.1930901942056	1068.5574411828168	3	357.19305419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSKSVHLSQP_	REV__ENST00000407184.5_2_7:5024574-5087708:+|nuORF	31.634271133179894	0.6214930414500597	3				NaN	NaN	0	NaN	67	2255	2323
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2328	11.904	NaN	2392.3	30	0	612.05	0.214	+			4962	ATQTRTVNK	9	53	509.7863380612153	1017.5581231892306	2	509.78619384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATQTRTVNK_	ENSG00000174231|ENST00000304992|PRPF8;ENST00000575116.1_1_17:1555319-1557183:-|nuORF;ENST00000576585.1_1_17:1556769-1557303:-|nuORF	72.87924865735499	0.12833875048249987	3				NaN	NaN	0	NaN	68	2258	2327
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2329	11.908	NaN	4243.9	30	0	563.99	0.106	+			3472	ASSATQVHK	9	60	464.7463746182737	927.4781963033474	2	465.24688720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASSATQVHK_	ENST00000361272.8_2_8:17102747-17104366:-|nuORF	53.08895987439943	0.27122541748218487	3				NaN	NaN	0	NaN	69	2258	2327
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2330	11.91	NaN	953.24	30	0	146.66	0.035			+	21573	KPFNSRIE	8	33	495.7697658529436	NaN	0	495.7706298828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KPFNSRIE_	REV__ENSG00000172673|ENST00000368248|THEMIS;REV__nc|ENSG00000172673|Q8N1K5-2|THEMIS;REV__nc|ENSG00000172673|Q8N1K5-3|THEMIS;REV__nc|ENSG00000172673|Q8N1K5-4|THEMIS;REV__THEMIS|p.V407Wfs*2|1|0.33|ENSG00000172673|chr6:127813423-127813423|T/-|frameshift_variant	73.97473282117947	1.7418937515398478	3				NaN	NaN	0	NaN	70	2258	2327
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2341	11.955	NaN	4077.3	30	0	1396.5	0.142	+			3501	ASSKDAIKK	9	58	474.2798984408979	946.5452439485958	2	474.2793273925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASSKDAIKK_	DSTN|p.Y117H|1|0.26|ENSG00000125868|chr20:17604592-17604592|T/C|missense_variant;ENSG00000125868|ENST00000246069|DSTN;ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000400899.2_1_1:11051144-11051557:-|nuORF;ENST00000530945.1_1_11:65623104-65623215:-|nuORF;nc|ENSG00000125868|P60981-2|DSTN;nc|ENSG00000165410|Q9Y281-3|CFL2	96.0336014099291	0.047854655524928534	3				NaN	NaN	0	NaN	72	2267	2340
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2350	11.987	NaN	1170.7	30	0	181.56	0.143			+	31607	QLVTAEERP	9	24	521.7806328118447	1041.5467126904894	2	521.7818603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QLVTAEERP_	REV__ENSG00000106246|ENST00000292478|PTCD1;REV__PTCD1|p.I598Hfs*42|1|0.12|ENSG00000106246|chr7:99423904-99423905|-/A|frameshift_variant	21.9598887501803	0.5980208138527809	3				NaN	NaN	0	NaN	75	2273	2349
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2358	12.019	NaN	2183	30	0	816.01	0.142	+			3083	ASGEGHHLK	9	47	468.23919130397496	934.46382967475	2	468.2382507324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASGEGHHLK_	ENSG00000131771|ENST00000254079|PPP1R1B;ENST00000580772.1_1_17:37785452-37786437:+|nuORF;nc|ENSG00000131771|Q9UD71-2|PPP1R1B;PPP1R1B|p.N97Rfs*45|1|0.46|ENSG00000131771|chr17:39633928-39633931|TGAA/-|frameshift_variant	82.24051045832904	0.08786059719216216	3				NaN	NaN	0	NaN	77	2279	2357
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2381	12.128	NaN	1247.3	30	0	381.52	0.142				-1	LTEAVARK	8	33	465.27491253997175	928.5352721467435	2	465.2745361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LTEAVARK_	ENST00000550482.1_1_12:54676006-54676048:+|nuORF	71.29570347882199	0.39610197767395533	3				NaN	NaN	0	NaN	79	2300	2380
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2386	12.144	NaN	9633.8	30	0	2655.9	0.142				-1	 	0	61	474.29887606625584	946.5831991993117	2	474.29815673828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	81	2303	2385
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2400	12.207	NaN	3998.8	30	0	1348	0.143	+			21691	KQENPNMR	8	52	508.75109590642677	1015.4876388796536	2	508.75103759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KQENPNMR_	ENSG00000007080|ENST00000445755|CCDC124	60.97194046774394	0.49215940876911696	3				NaN	NaN	0	NaN	83	2315	2399
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2404	12.222	NaN	8344.8	30	0	2331.5	0.214	+			38783	SSMPSSRHK	9	43	339.50317992179976	1015.4877103655992	3	339.5029602050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSMPSSRHK_	AFF4|p.R689Gfs*28|1|0.29|ENSG00000072364|chr5:132896566-132896566|A/-|frameshift_variant;ENSG00000072364|ENST00000265343|AFF4;nc|ENSG00000072364|Q9UHB7-2|AFF4	36.446750945000026	0.4619375763483977	3				NaN	NaN	0	NaN	84	2318	2403
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2405	12.226	NaN	6896.5	30	0	861.06	0.037	+			5389	ATYETKESKK	10	74	592.8122019551361	1183.609850977072	2	593.3143920898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATYETKESKK_	ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65623404-65625570:-|nuORF;nc|ENSG00000165410|Q9Y281-3|CFL2	123.61838826891271	0.022219295260619363	3				NaN	NaN	0	NaN	85	2318	2403
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2418	12.273	NaN	6771.3	30	0	2082.8	0.214	+			5637	AVDAPRRHK	9	49	525.3023772916868	1048.5902016501734	2	525.3037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVDAPRRHK_	ENSG00000119912|ENST00000265986|IDE;ENST00000496903.5_1_10:94214203-94257457:-|nuORF;nc|ENSG00000119912|P14735-2|IDE	47.95952297671804	0.32689736945648856	3				NaN	NaN	0	NaN	89	2327	2417
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2419	12.276	NaN	8618.1	30	0	3287.2	0.036	+			5638	AVDAPRRHK	9	32	350.53727089393226	1048.5899832819969	3	350.5369873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVDAPRRHK_	ENSG00000119912|ENST00000265986|IDE;ENST00000496903.5_1_10:94214203-94257457:-|nuORF;nc|ENSG00000119912|P14735-2|IDE	32.81241826257853	0.4965981579233955	3				NaN	NaN	0	NaN	90	2327	2417
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2426	12.305	NaN	2378.9	30	0	560.54	0.142	+			20946	KKCVTLEK	8	54	474.7814422513306	NaN	0	474.7809753417969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KKCVTLEK_	ENSG00000215277|ENST00000430154|RNF212B	74.25504064058377	1.7418937515398478	3				NaN	NaN	0	NaN	91	2333	2425
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2454	12.418	NaN	2617.9	30	0	399.25	0.214	+			19559	KCLNSTQR	8	52	475.2489927461807	948.4834325591614	2	475.2478332519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KCLNSTQR_	ENSG00000170954|ENST00000243643|ZNF415;ENST00000594286.5_1_19:53619136-53625671:-|nuORF;nc|ENSG00000170954|Q09FC8-6|ZNF415;ZNF415|p.I93Yfs*18|1|0.18|ENSG00000170954|chr19:53109768-53109768|T/-|frameshift_variant	73.97473282117947	0.3737790450121076	3				NaN	NaN	0	NaN	98	2354	2453
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2455	12.422	NaN	659.15	30	0	133.98	0.035				-1	AGCGKTYTK	9	32	493.2425560889195	NaN	0	493.2427673339844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_AGC(Carbamidomethyl (C))GKTYTK_	ENSG00000127528|ENST00000248071|KLF2;ENSG00000136826|ENST00000374672|KLF4;ENST00000497048.5_1_9:110248034-110250560:-|nuORF;KLF4|p.D429Lfs*13|1|0.08|ENSG00000136826|chr9:107485905-107485906|TC/-|frameshift_variant;nc|ENSG00000136826|O43474-4|KLF4;nc|ENSG00000136826|O43474|KLF4	36.446750945000026	0.29355505452396785	3				NaN	NaN	0	NaN	99	2354	2453
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2459	12.436	NaN	3139.4	30	0	618.45	0.144	+			22680	KVADHSGQVK	10	55	534.7947907993223	1067.5750286654445	2	534.7937622070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVADHSGQVK_	ENSG00000188243|ENST00000682242|COMMD6;ENST00000477377.1_1_13:76104099-76111947:-|nuORF;nc|ENSG00000188243|Q7Z4G1-2|COMMD6	162.63603312974413	0.006026810256601855	3				NaN	NaN	0	NaN	100	2357	2458
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2467	12.468	NaN	4335.6	30	0	2724.7	0.145			+	-1	KPVRCICNTG	10	37	383.19630987404355	1146.5671002223307	3	383.1961364746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_KPVRC(Carbamidomethyl (C))ICNTG_	REV__ENSG00000106245|ENST00000222969|BUD31;REV__ENST00000466798.1_1_7:99013792-99015269:+|nuORF;REV__nc|ENSG00000106245|P41223-2|BUD31	27.047317107675042	0.6589519614906109	3				NaN	NaN	0	NaN	102	2363	2466
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2472	12.484	NaN	2469.6	30	0	1369.3	0.215	+			21574	KPFPAEFPSQ	10	29	574.2915389755295	NaN	0	574.2922973632812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KPFPAEFPSQ_	ENST00000336034.8_1_19:42703119-42703434:-|nuORF	20.030474535948922	0.4201028297492154	3				NaN	NaN	0	NaN	104	2366	2471
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2473	12.487	NaN	5534.5	30	0	1456.4	0.035	+			38819	SSNDKVIKK	9	53	509.7986408953278	1017.5827288574557	2	509.7992858886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSNDKVIKK_	ALDH3A1|p.P445Rfs*6|4|0.31|ENSG00000108602|chr17:19738336-19738336|G/-|frameshift_variant;ENSG00000108602|ENST00000225740|ALDH3A1;ENST00000479677.6_1_17:19641536-19646703:-|nuORF	99.01295224348159	0.040209060045561164	3				NaN	NaN	0	NaN	105	2366	2471
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2477	12.501	NaN	1086.1	30	0	427.48	0.144	+			17089	HSCPESVKK	9	47	536.2669571006775	1070.5193612681549	2	536.267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_HSC(Carbamidomethyl (C))PESVKK_	ENSG00000178425|ENST00000319550|NT5DC1;nc|ENSG00000178425|Q5TFE4-2|NT5DC1;NT5DC1|p.F379Lfs*74|1|0.1|ENSG00000178425|chr6:116239002-116239002|T/-|frameshift_variant	67.49366992349736	0.1516260258713357	3				NaN	NaN	0	NaN	106	2369	2476
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2486	12.525	NaN	1978.3	30	0	393.79	0.144	+			1552	AGFELLLQK	9	33	340.2010803222656	NaN	0	340.2010803222656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AGFELLLQK_	ENSG00000007237|ENST00000432992|GAS7;nc|ENSG00000007237|O60861-1|GAS7;nc|ENSG00000007237|O60861-2|GAS7;nc|ENSG00000007237|O60861-4|GAS7	23.52269567125451	0.3573684076213556	3				NaN	NaN	0	NaN	112	2372	2485
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2490	12.541	NaN	3394.5	30	0	717.75	0.143	+			15348	GTVNRATEK	9	54	488.2655923440022	974.5166317548044	2	488.2651062011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTVNRATEK_	ENSG00000164611|ENST00000352433|PTTG1;ENSG00000250254|ENST00000504686|PTTG2;ENST00000519287.1_1_5:159849240-159855685:+|nuORF;ENST00000523659.5_1_5:159849319-159851384:+|nuORF;ENST00000524244.5_1_5:159849319-159849927:+|nuORF;nc|ENSG00000213005|Q9NZH4|PTTG3P;nc|ENSG00000250254|Q9NZH5|PTTG2;PTTG2|p.K84Nfs*10|1|0.19|ENSG00000250254|chr4:37960682-37960682|A/-|frameshift_variant	106.88024417677582	0.032181361622142884	3				NaN	NaN	0	NaN	113	2375	2489
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2503	12.589	NaN	1115.5	30	0	344.82	0.142			+	23048	KVTDVKKN	8	31	466.2827995456811	930.5510461581622	2	466.2826843261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVTDVKKN_	REV__ENSG00000124486|ENST00000378308|USP9X;REV__nc|ENSG00000124486|Q93008-3|USP9X;REV__USP9X|p.K2377*|1|0.88|ENSG00000124486|chrX:41229318-41229319|-/T|frameshift_variant;REV__USP9X|p.Y1953Mfs*7|1|0.72|ENSG00000124486|chrX:41216419-41216419|T/-|frameshift_variant	76.7741389293348	0.3504530765139327	3				NaN	NaN	0	NaN	117	2384	2502
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2507	12.605	NaN	2112	30	0	514.32	0.145	+			21467	KNGNSRRPKA	10	26	564.3240434226616	1126.633533912123	2	564.8259887695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KNGNSRRPKA_	nc|ENSG00000135525|Q14244-4|MAP7;nc|ENSG00000135525|Q14244-7|MAP7	15.333111300571575	0.7385351678742351	3				NaN	NaN	0	NaN	118	2387	2506
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2515	12.637	NaN	8745.9	30	0	4027	0.142	+			5344	ATVTKKVAK	9	57	473.3088365206707	944.6031201081414	2	473.30853271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATVTKKVAK_	ENSG00000187837|ENST00000343677|H1-2	115.49404669440601	0.023927554121326553	3				NaN	NaN	0	NaN	120	2393	2514
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2520	12.653	NaN	2603	30	0	911.95	0.214	+			21549	KNTQVLKK	8	51	479.8067086752722	957.5988644173444	2	479.80596923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KNTQVLKK_	ENSG00000177853|ENST00000316045|ZNF518A;ZNF518A|p.I1254Nfs*11|1|0.18|ENSG00000177853|chr10:96160075-96160076|-/A|frameshift_variant;ZNF518A|p.L1107Ffs*8|1|0.31|ENSG00000177853|chr10:96159635-96159636|-/T|frameshift_variant;ZNF518A|p.N426Mfs*2|1|0.29|ENSG00000177853|chr10:96157595-96157595|A/-|frameshift_variant	67.49366992349736	0.4277823096851425	3				NaN	NaN	0	NaN	122	2396	2519
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2521	12.656	NaN	1276.3	30	0	271.41	0.037			+	9012	EGALEGRLLAV	11	29	376.55160246743185	1126.6329780024955	3	376.8851623535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EGALEGRLLAV_	REV__ENSG00000176531|ENST00000292140|PHLDB3;REV__ENST00000596902.1_1_19:44005819-44008744:-|nuORF;REV__nc|ENSG00000176531|Q6NSJ2-2|PHLDB3;REV__PHLDB3|p.R409Dfs*32|1|0.52|ENSG00000176531|chr19:43487048-43487048|G/-|frameshift_variant	20.94693142431847	0.7700749696703488	3				NaN	NaN	0	NaN	123	2396	2519
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2542	12.736	NaN	1559.4	30	0	585.91	0.142	+			3502	ASSKDAIKK	9	46	474.2798984408979	946.5452439485958	2	474.27996826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASSKDAIKK_	DSTN|p.Y117H|1|0.26|ENSG00000125868|chr20:17604592-17604592|T/C|missense_variant;ENSG00000125868|ENST00000246069|DSTN;ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000400899.2_1_1:11051144-11051557:-|nuORF;ENST00000530945.1_1_11:65623104-65623215:-|nuORF;nc|ENSG00000125868|P60981-2|DSTN;nc|ENSG00000165410|Q9Y281-3|CFL2	106.68306549817024	0.032382560583716295	3				NaN	NaN	0	NaN	129	2411	2541
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2547	12.752	NaN	20526	30	0	4434.4	0.146	+			33951	RSASSATQVHK	11	86	391.21113150249727	1170.6115651076918	3	391.2109680175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RSASSATQVHK_	ENST00000361272.8_2_8:17102747-17104366:-|nuORF	159.33581866081465	5.4966198810242E-05	3				NaN	NaN	0	NaN	131	2414	2546
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2562	12.795	NaN	4689.2	30	0	751.6	0.142	+			6264	AVSKVSTNK	9	64	467.2723067172329	932.5300605012658	2	467.2713928222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVSKVSTNK_	ENSG00000173744|ENST00000310078|AGFG1;nc|ENSG00000173744|P52594-2|AGFG1;nc|ENSG00000173744|P52594-3|AGFG1;nc|ENSG00000173744|P52594-4|AGFG1	117.5257442709337	0.022697614825424036	3				NaN	NaN	0	NaN	140	2420	2561
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2567	12.812	NaN	1032	30	0	179.84	0.143			+	31441	QKQFPLTR	8	47	509.29532580255795	1016.5760986719159	2	509.2950134277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QKQFPLTR_	REV__ENST00000492808.5_1_1:26644456-26645257:+|nuORF	40.77816245573522	0.6514838689002179	3				NaN	NaN	0	NaN	142	2423	2566
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2579	12.849	NaN	1750.2	30	0	340.57	0.144			+	21044	KKKREMQK	8	38	538.3252639497367	NaN	0	538.3252563476562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KKKREMQK_	REV__L1PA8_dup4178|chr8:94121319-94127043:-|4.057818296907117|0.2856926403965029|3.83|481.0|66|2|sense	51.33545320467046	1.7418937515398478	3				NaN	NaN	0	NaN	148	2429	2578
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2583	12.865	NaN	1607.6	30	0	358.31	0.143				-1	FSINGLMIK	9	42	519.788623586257	NaN	0	519.7886352539062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_FSINGLM(Oxidation (M))IK_	ENSG00000145934|ENST00000518659|TENM2;nc|ENSG00000145934|Q9NT68-2|TENM2	37.81151784470057	0.28666463014928195	3				NaN	NaN	0	NaN	149	2432	2582
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2589	12.882	NaN	1890.3	30	0	394.77	0.143	+			46793	VHLIRTGSQ	9	52	505.79149776841876	1009.5684426036375	2	505.79150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VHLIRTGSQ_	ENSG00000186141|ENST00000334163|POLR3C;POLR3C|p.T412Hfs*15|1|0.39|ENSG00000186141|chr1:145839899-145839899|A/-|frameshift_variant	56.43379154798735	0.2433427591689151	3				NaN	NaN	0	NaN	152	2435	2588
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2593	12.898	NaN	4629.3	30	0	693.76	0.141	+			3482	ASSGALRSK	9	65	438.7489431045847	875.4833332759695	2	438.7486267089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASSGALRSK_	ENSG00000067066|ENST00000340126|SP100;nc|ENSG00000067066|P23497-2|SP100;nc|ENSG00000067066|P23497-3|SP100;nc|ENSG00000067066|P23497-5|SP100;nc|ENSG00000067066|P23497-6|SP100;nc|ENSG00000067066|P23497-7|SP100;nc|ENSG00000067066|P23497|SP100;SP100|p.A416T|1|0.67|ENSG00000067066|chr2:230467170-230467170|G/A|missense_variant	91.26522074875469	0.06129826844580791	3				NaN	NaN	0	NaN	153	2438	2592
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2598	12.914	NaN	1115.5	30	0	367.43	0.143	+			11614	FPTTTTKKP	9	39	510.7914733886719	NaN	0	510.7914733886719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FPTTTTKKP_	sp|Q6SWB9|UL11P_HCMVMProteinUL11OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL11PE=1SV=1	45.02220120713402	0.24099765136254067	3				NaN	NaN	0	NaN	155	2441	2597
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2603	12.931	NaN	6548.9	30	0	4606.5	0.214			+	26470	LTKLVNGPK	9	40	485.3084837815263	968.6024146298527	2	485.3080139160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LTKLVNGPK_	REV__ENSG00000099250|ENST00000374867|NRP1	34.172542307311794	0.4838870758800184	3				NaN	NaN	0	NaN	157	2444	2602
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2604	12.934	NaN	4142.3	30	0	1444.8	0.036				-1	TLRSQEACL	9	32	359.8492556809901	NaN	0	359.8492431640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_TLRSQEAC(Carbamidomethyl (C))L_	ENSG00000185347|ENST00000392523|TEDC1;nc|ENSG00000185347|Q86SX3-2|TEDC1;nc|ENSG00000185347|Q86SX3-3|TEDC1;nc|ENSG00000185347|Q86SX3-4|TEDC1;nc|ENSG00000185347|Q86SX3-5|TEDC1;nc|ENSG00000185347|Q86SX3-6|TEDC1	32.81241826257853	0.3119040447479903	3				NaN	NaN	0	NaN	158	2444	2602
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2610	12.95	NaN	4043.2	30	0	947.13	0.215	+			44680	TTHVTKTVK	9	61	507.8006734628526	1013.5867939925052	2	507.8005676269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTHVTKTVK_	ENSG00000088367|ENST00000338074|EPB41L1;nc|ENSG00000088367|Q9H4G0-2|EPB41L1;nc|ENSG00000088367|Q9H4G0-3|EPB41L1;nc|ENSG00000088367|Q9H4G0-4|EPB41L1	126.24258497203832	0.01742065577488747	3				NaN	NaN	0	NaN	161	2447	2609
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2611	12.954	NaN	26761	30	0	19185	0.106	+			4851	ATPKKTVPK	9	44	323.87470619390285	968.6022891819086	3	324.2092590332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATPKKTVPK_	ENSG00000166197|ENST00000605788|NOLC1;nc|ENSG00000166197|Q14978-3|NOLC1	31.529811441608018	0.5085848003137583	3				NaN	NaN	0	NaN	162	2447	2609
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2612	12.956	NaN	705.66	30	0	88.601	0.034			+	7633	DKKPNFGV	8	36	452.7457609824735	NaN	0	452.7466125488281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DKKPNFGV_	REV__ENSG00000103342|ENST00000434724|GSPT1;REV__nc|ENSG00000103342|P15170-2|GSPT1;REV__nc|ENSG00000103342|P15170|GSPT1	33.51558372728122	1.7418937515398478	3				NaN	NaN	0	NaN	163	2447	2609
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2621	12.975	NaN	28766	30	0	13048	0.214	+			35458	SASSATQVHK	10	51	339.1771819919763	1014.5097165761289	3	339.1768798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SASSATQVHK_	ENST00000361272.8_2_8:17102747-17104366:-|nuORF	68.62578634547417	0.2885473079336931	3				NaN	NaN	0	NaN	169	2450	2620
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2622	12.979	NaN	2090.4	30	0	442.52	0.106	+			38444	SSALTNHK	8	51	429.2275611311264	856.4405693290528	2	429.227294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSALTNHK_	ENSG00000185177|ENST00000319636|ZNF479;ENSG00000197013|ENST00000358491|ZNF429;ZNF429|p.H387Qfs*13|1|0.26|ENSG00000197013|chr19:21537213-21537214|AT/-|frameshift_variant;ZNF479|p.K332Afs*2|1|0.05|ENSG00000185177|chr7:57120421-57120422|-/AGGC|frameshift_variant;ZNF479|p.R289I|1|0.68|ENSG00000185177|chr7:57120549-57120549|C/A|missense_variant	120.62098272573253	0.23366758524054274	3				NaN	NaN	0	NaN	170	2450	2620
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2623	12.981	NaN	1629.8	30	0	471.53	0.106	+			29808	PKGAAILK	8	37	399.26565735300824	NaN	0	399.2656555175781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PKGAAILK_	nc|ENSG00000134333|P00338-2|LDHA	47.91560031466742	1.7418937515398478	3				NaN	NaN	0	NaN	171	2450	2620
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2624	12.983	NaN	1372.1	30	0	317.9	0.106	+			21718	KQKKPLVGK	9	41	513.3451598178576	1024.6757667025151	2	513.345458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KQKKPLVGK_	ENSG00000174444|ENST00000307961|RPL4;ENST00000422486.1_1_3:185135285-185135612:-|nuORF;ENST00000567229.5_1_15:66791747-66793486:-|nuORF	60.97194046774394	0.20551255781574032	3				NaN	NaN	0	NaN	172	2450	2620
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2625	12.984	NaN	2565.6	30	0	281.66	0.106	+			48120	VSVDKFTAM	9	37	333.1733988520163	NaN	0	333.17315673828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSVDKFTAM_	nc|ENSG00000005801|O14628-5|ZNF195;nc|ENSG00000005801|O14628-6|ZNF195	31.954861631926434	0.3162336699109506	3				NaN	NaN	0	NaN	173	2450	2620
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2626	12.986	NaN	5135.2	30	0	1827	0.036	+			5722	AVFNQTVTGI	10	29	350.52504109118763	1048.5532938737629	3	350.524658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AVFNQTVTGI_	SSR1|p.V196G|1|0.43|ENSG00000124783|chr6:7298780-7298780|A/C|missense_variant	29.170058357718403	0.6416167986984785	3				NaN	NaN	0	NaN	174	2450	2620
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2638	13.011	NaN	3622.4	30	0	653	0.214	+			1001	AEKKTKQTL	9	56	523.8147792147764	1045.6150054963528	2	523.8145751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEKKTKQTL_	ENSG00000165525|ENST00000298310|NEMF;ENST00000556925.5_1_14:50285084-50295410:-|nuORF;ENST00000557380.5_1_14:50292586-50301128:-|nuORF;nc|ENSG00000165525|O60524-3|NEMF;nc|ENSG00000165525|O60524-4|NEMF;nc|ENSG00000165525|O60524-5|NEMF;NEMF|p.K641Rfs*9|1|0.15|ENSG00000165525|chr14:49802721-49802721|T/-|frameshift_variant;NEMF|p.M879*|1|0.12|ENSG00000165525|chr14:49789558-49789558|T/-|frameshift_variant;NEMF|p.M879Nfs*10|1|0.13|ENSG00000165525|chr14:49789557-49789558|-/T|frameshift_variant	82.7504851949679	0.08565546331141553	3				NaN	NaN	0	NaN	183	2453	2637
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2639	13.015	NaN	599.28	30	0	106.83	0.035			+	46780	VHCIFKRV	8	23	501.2906494140625	NaN	0	501.2906494140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VHCIFKRV_	REV__ENSG00000178982|ENST00000248342|EIF3K;REV__nc|ENSG00000178982|Q9UBQ5-2|EIF3K	31.954861631926434	1.7418937515398478	3				NaN	NaN	0	NaN	184	2453	2637
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2651	13.049	NaN	2378.7	30	0	501.05	0.214	+			6251	AVSKEVTRK	9	51	509.3073138859881	1016.6000748387762	2	509.3074645996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVSKEVTRK_	ENSG00000114850|ENST00000265044|SSR3;ENST00000467733.1_1_3:156262080-156272878:-|nuORF;ENST00000498205.5_1_3:156260994-156266845:-|nuORF;nc|ENSG00000114850|Q9UNL2-2|SSR3	56.43379154798735	0.2433427591689151	3				NaN	NaN	0	NaN	190	2459	2650
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2652	13.052	NaN	5725.7	30	0	1365.8	0.036				-1	 	0	59	343.54562240562245	1027.6150378170673	3	343.54559326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	191	2459	2650
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2663	13.098	NaN	2457.7	30	0	298.8	0.214	+			40428	STVKENMKK	9	53	532.7931670316842	1063.5717811301683	2	532.7932739257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STVKENMKK_	ENST00000590996.5_2_17:41329998-41338351:+|nuORF	65.46538089061403	0.16805504838372562	3				NaN	NaN	0	NaN	193	2468	2662
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2664	13.101	NaN	2629	30	0	516.29	0.106			+	45061	TVHHIIGNE	9	42	510.2677513062587	1018.5209496793174	2	510.2682800292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVHHIIGNE_	REV__ENSG00000046889|ENST00000288368|PREX2;REV__ENST00000517617.1_1_8:68864752-69023167:+|nuORF;REV__ENST00000529398.5_1_8:68864629-69017594:+|nuORF;REV__nc|ENSG00000046889|Q70Z35-3|PREX2;REV__nc|ENSG00000046889|Q70Z35-4|PREX2;REV__PREX2|p.S552Kfs*6|1|0.33|ENSG00000046889|chr8:68080448-68080449|-/A|frameshift_variant;REV__PREX2|p.S565Rfs*10|1|0.31|ENSG00000046889|chr8:68080486-68080486|T/-|frameshift_variant	56.72105179125745	0.24094814563026265	3				NaN	NaN	0	NaN	194	2468	2662
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2665	13.103	NaN	1480.3	30	0	283.76	0.106	+			21158	KKVGAKAAQQ	10	56	514.8145965777429	1027.6146402222857	2	514.8143920898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KKVGAKAAQQ_	ENSG00000196642|ENST00000311502|RABL6;ENST00000432853.1_1_2:132592224-132593771:-|nuORF;nc|ENSG00000196642|Q3YEC7-2|RABL6;RABL6|p.K613Sfs*9|1|0.17|ENSG00000196642|chr9:136839766-136839766|C/-|frameshift_variant	51.33545320467046	0.4446945571623749	3				NaN	NaN	0	NaN	195	2468	2662
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2666	13.105	NaN	1434.6	30	0	845.46	0.035			+	46706	VGLILSFCAK	10	27	525.8062873879672	NaN	0	525.8060913085938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VGLILSFCAK_	REV__ENSG00000197849|ENST00000641972|OR8G1	15.641811463095205	0.4201028297492154	3				NaN	NaN	0	NaN	196	2468	2662
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2679	13.142	NaN	669.69	30	0	66.667	0.141	+			13964	GSAPRTPSK	9	39	450.7491350459139	899.4837171586278	2	450.7486877441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSAPRTPSK_	ENSG00000198901|ENST00000394249|PRC1;nc|ENSG00000198901|O43663-2|PRC1;nc|ENSG00000198901|O43663-3|PRC1;nc|ENSG00000198901|O43663-4|PRC1	25.125986553469783	0.568431947241088	3				NaN	NaN	0	NaN	203	2474	2678
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2689	13.175	NaN	4830.3	30	0	647.81	0.145			+	39768	STKDEGLYET	10	63	571.7633429539595	1141.512132974719	2	571.7639770507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STKDEGLYET_	REV__ENSG00000110002|ENST00000456829|VWA5A;REV__nc|ENSG00000110002|O00534-2|VWA5A;REV__nc|ENSG00000110002|O00534-3|VWA5A;REV__nc|ENSG00000110002|O00534-4|VWA5A;REV__VWA5A|p.D273Ifs*24|1|0.19|ENSG00000110002|chr11:124123014-124123014|A/-|frameshift_variant;REV__VWA5A|p.D571Mfs*3|1|0.56|ENSG00000110002|chr11:124137094-124137094|A/-|frameshift_variant;REV__VWA5A|p.G366Afs*38|1|0.21|ENSG00000110002|chr11:124123733-124123733|G/-|frameshift_variant	54.722347961057174	0.4138398245444204	3				NaN	NaN	0	NaN	207	2480	2688
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2693	13.191	NaN	1221.6	30	0	144.74	0.213	+			44469	TSQDETYEVK	10	47	600.2745971679688	NaN	0	600.2745971679688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSQDETYEVK_	CACNA1C|p.A2072Pfs*18|1|0.55|ENSG00000151067|chr12:2688729-2688729|G/-|frameshift_variant;CACNA1C|p.P2073Qfs*17|1|0.21|ENSG00000151067|chr12:2688733-2688733|C/-|frameshift_variant;ENSG00000151067|ENST00000399655|CACNA1C;nc|ENSG00000151067|Q13936-10|CACNA1C;nc|ENSG00000151067|Q13936-11|CACNA1C;nc|ENSG00000151067|Q13936-13|CACNA1C;nc|ENSG00000151067|Q13936-14|CACNA1C;nc|ENSG00000151067|Q13936-15|CACNA1C;nc|ENSG00000151067|Q13936-16|CACNA1C;nc|ENSG00000151067|Q13936-17|CACNA1C;nc|ENSG00000151067|Q13936-18|CACNA1C;nc|ENSG00000151067|Q13936-19|CACNA1C;nc|ENSG00000151067|Q13936-2|CACNA1C;nc|ENSG00000151067|Q13936-20|CACNA1C;nc|ENSG00000151067|Q13936-21|CACNA1C;nc|ENSG00000151067|Q13936-22|CACNA1C;nc|ENSG00000151067|Q13936-23|CACNA1C;nc|ENSG00000151067|Q13936-24|CACNA1C;nc|ENSG00000151067|Q13936-25|CACNA1C;nc|ENSG00000151067|Q13936-26|CACNA1C;nc|ENSG00000151067|Q13936-27|CACNA1C;nc|ENSG00000151067|Q13936-28|CACNA1C;nc|ENSG00000151067|Q13936-29|CACNA1C;nc|ENSG00000151067|Q13936-3|CACNA1C;nc|ENSG00000151067|Q13936-30|CACNA1C;nc|ENSG00000151067|Q13936-31|CACNA1C;nc|ENSG00000151067|Q13936-32|CACNA1C;nc|ENSG00000151067|Q13936-33|CACNA1C;nc|ENSG00000151067|Q13936-34|CACNA1C;nc|ENSG00000151067|Q13936-35|CACNA1C;nc|ENSG00000151067|Q13936-36|CACNA1C;nc|ENSG00000151067|Q13936-37|CACNA1C;nc|ENSG00000151067|Q13936-4|CACNA1C;nc|ENSG00000151067|Q13936-5|CACNA1C;nc|ENSG00000151067|Q13936-6|CACNA1C;nc|ENSG00000151067|Q13936-7|CACNA1C;nc|ENSG00000151067|Q13936-8|CACNA1C;nc|ENSG00000151067|Q13936-9|CACNA1C;nc|ENSG00000151067|Q13936|CACNA1C	36.446750945000026	0.3805027428805705	3				NaN	NaN	0	NaN	208	2483	2692
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2694	13.194	NaN	959.65	30	0	133.63	0.106	+			45770	VAGAATPKK	9	36	421.7591236180443	841.5036943028887	2	421.7586364746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VAGAATPKK_	ENSG00000124575|ENST00000244534|H1-3	77.31757898189308	0.1091473830098891	3				NaN	NaN	0	NaN	209	2483	2692
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2695	13.196	NaN	1877.9	30	0	346.98	0.106			+	37310	SLDKVEKNFY	10	50	621.8211360073119	1241.6277190814237	2	621.8204956054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLDKVEKNFY_	REV__tr|U7SJI8|U7SJI8_FUSNUPenicillin-bindingprotein1COS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02062PE=4SV=1	65.15724298150197	0.31893571707528906	3				NaN	NaN	0	NaN	210	2483	2692
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2696	13.198	NaN	1311.5	30	0	341.79	0.036	+			26532	LTQVRESRV	9	39	544.3155809204945	1086.616608907789	2	544.3159790039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LTQVRESRV_	ENST00000608756.5_1_3:122145799-122145940:+|nuORF	39.252832667884924	0.4290233611298554	3				NaN	NaN	0	NaN	211	2483	2692
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2704	13.216	NaN	6203.6	30	0	1202.1	0.214				-1	PCCLPSRLPTV	11	50	414.8830718270413	1241.627386081324	3	414.88250732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_PCC(Carbamidomethyl (C))LPSRLPTV_	ENST00000435580.1_1_1:160032398-160034603:+|nuORF	32.75053402867276	0.6462648045997152	3				NaN	NaN	0	NaN	216	2486	2703
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2705	13.22	NaN	972.77	30	0	327.55	0.034	+			3503	ASSKDAIKK	9	34	474.2802838318496	946.5460147304992	2	474.2792663574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASSKDAIKK_	DSTN|p.Y117H|1|0.26|ENSG00000125868|chr20:17604592-17604592|T/C|missense_variant;ENSG00000125868|ENST00000246069|DSTN;ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000400899.2_1_1:11051144-11051557:-|nuORF;ENST00000530945.1_1_11:65623104-65623215:-|nuORF;nc|ENSG00000125868|P60981-2|DSTN;nc|ENSG00000165410|Q9Y281-3|CFL2	30.317721548370564	0.5199124245378496	3				NaN	NaN	0	NaN	217	2486	2703
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2712	13.237	NaN	2046.2	30	0	351.34	0.214				-1	 	0	48	381.72205228753637	761.4295516418728	2	381.7216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	221	2489	2711
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2713	13.241	NaN	2560.8	30	0	441.85	0.106			+	21072	KKLQFAPQ	8	46	480.28605025014315	958.5575475670863	2	480.2852478027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KKLQFAPQ_	REV__ENSG00000132017|ENST00000254337|DCAF15	35.200714571348534	0.6875396545722289	3				NaN	NaN	0	NaN	222	2489	2711
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2714	13.243	NaN	1059.1	30	0	172.69	0.038	+			18407	IRWICQKEL	9	38	594.8337769770939	1187.6530010209876	2	594.8331909179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IRWICQKEL_	ENSG00000111796|ENST00000229402|KLRB1	44.377184641726394	0.36891676396732553	3				NaN	NaN	0	NaN	223	2489	2711
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2725	13.268	NaN	1187.2	30	0	152.63	0.214			+	31115	QFSVKHMK	8	50	502.77276611328125	NaN	0	502.77276611328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QFSVKHMK_	REV__KIF5C|p.E679K|1|0.08|ENSG00000168280|chr2:148997275-148997275|G/A|missense_variant	90.36981228632155	1.7418937515398478	3				NaN	NaN	0	NaN	231	2492	2724
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2726	13.271	NaN	534.59	30	0	98.265	0.106	+			39544	STFSSSTKK	9	34	486.7525329589844	NaN	0	486.7525329589844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STFSSSTKK_	ENSG00000165185|ENST00000337530|KIAA1958;nc|ENSG00000165185|Q8N8K9-3|KIAA1958	26.69291269510374	0.34280015626154364	3				NaN	NaN	0	NaN	232	2492	2724
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2727	13.273	NaN	1267.7	30	0	257.25	0.106			+	21813	KRDKVALN	8	47	472.28796680474477	NaN	0	472.2880554199219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KRDKVALN_	REV__ENSG00000125931|ENST00000651998|CITED1;REV__nc|ENSG00000125931|Q99966-2|CITED1	42.396135135203025	1.7418937515398478	3				NaN	NaN	0	NaN	233	2492	2724
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2728	13.275	NaN	489.88	30	0	27.25	0.036	+			50936	YHAPPLSAIT	10	32	535.2856116921884	NaN	0	535.2860717773438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YHAPPLSAIT_	ENSG00000173276|ENST00000310826|ZBTB21;nc|ENSG00000173276|Q9ULJ3-2|ZBTB21	21.9598887501803	0.4201028297492154	3				NaN	NaN	0	NaN	234	2492	2724
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2732	13.289	NaN	1671.8	30	0	541.58	0.143			+	22580	KTSTQRLLP	9	45	522.3139855094714	1042.6134180857428	2	522.3140258789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTSTQRLLP_	REV__ENSG00000196482|ENST00000408911|ESRRG;REV__nc|ENSG00000196482|P62508-2|ESRRG;REV__nc|ENSG00000196482|P62508-3|ESRRG;REV__nc|ENSG00000196482|P62508-4|ESRRG;REV__nc|ENSG00000196482|P62508-5|ESRRG	70.8162118820467	0.13725933411854815	3				NaN	NaN	0	NaN	235	2495	2731
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2739	13.32	NaN	3150.9	30	0	432.4	0.214				-1	 	0	56	487.3065498493469	972.5985467654938	2	487.3058166503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	236	2501	2738
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2740	13.324	NaN	1315.9	30	0	457.42	0.036	+			14010	GSFGKDQAHK	10	41	537.7716807152875	1073.528808497375	2	537.7713623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSFGKDQAHK_	ENSG00000134987|ENST00000513710|WDR36;ENST00000505303.5_1_5:110428043-110447004:+|nuORF;nc|ENSG00000134987|Q8NI36|WDR36	47.95952297671804	0.47580206326914537	3				NaN	NaN	0	NaN	237	2501	2738
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2771	13.448	NaN	1912.2	30	0	609.5	0.143	+			22262	KTATAVAHCK	10	39	515.2803072846931	1028.546061636186	2	515.2797241210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTATAVAHCK_	chr19:39435705-39435848|468|276.17|0.0|24.72|-|0|RPS16,RPS16|1;ENSG00000105193|ENST00000251453|RPS16;ENST00000601390.1_1_19:39926180-39926535:-|nuORF	67.21430809963624	0.30022695875429783	3				NaN	NaN	0	NaN	244	2525	2770
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2778	13.468	NaN	2153.3	30	0	346.26	0.214	+			5379	ATYETKESK	9	47	528.7648888813861	1055.5152248295722	2	528.7653198242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATYETKESK_	ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65623404-65625570:-|nuORF;nc|ENSG00000165410|Q9Y281-3|CFL2	117.81106730687013	0.02252488733980868	3				NaN	NaN	0	NaN	248	2528	2777
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2779	13.472	NaN	1640.5	30	0	869.62	0.036	+			7955	DSNTPLLFAI	10	35	545.7931494985341	1089.5717460638682	2	545.793212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DSNTPLLFAI_	ENST00000432432.6_1_2:95480778-95522914:-|nuORF;nc|ENSG00000229089|Q5CZ79|ANKRD20A8P	28.081489160057373	0.6505064946289502	3				NaN	NaN	0	NaN	249	2528	2777
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2786	13.488	NaN	897.87	30	0	189.8	0.139			+	12056	GAAALRVP	8	32	377.73292831878916	753.4513037043783	2	377.73236083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GAAALRVP_	REV__ENST00000379692.8_1_4:121993476-121993653:-|nuORF	21.70233525837049	0.7917639344264583	3				NaN	NaN	0	NaN	253	2531	2785
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2793	13.506	NaN	2255	30	0	523.27	0.214	+			6132	AVQDKGSIHK	10	55	541.8020532568017	1081.5895535804034	2	541.8021240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVQDKGSIHK_	ENSG00000178035|ENST00000326739|IMPDH2;ENST00000466147.5_1_3:49062090-49062580:-|nuORF;ENST00000484872.1_1_3:49061926-49062670:-|nuORF	68.84614121027924	0.2867470276772903	3				NaN	NaN	0	NaN	257	2534	2792
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2794	13.51	NaN	3613.9	30	0	1140.3	0.106	+			13293	GKAFGSGSN	9	33	412.6992220287135	823.383891124227	2	413.2001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GKAFGSGSN_	ENSG00000251247|ENST00000420450|ZNF345;ENSG00000251247|ENST00000420450|ZNF345;ZNF345|p.L217F|1|0.33|ENSG00000251247|chr19:36877479-36877479|C/T|missense_variant	35.61828744233558	0.47037581924408073	3				NaN	NaN	0	NaN	258	2534	2792
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2795	13.512	NaN	3448	30	0	1715.8	0.039	+			41350	SVLWNAMIHPL	11	39	427.5659694861123	1279.676079058537	3	427.5654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVLWNAMIHPL_	ENSG00000110013|ENST00000263593|SIAE;nc|ENSG00000110013|Q9HAT2-2|SIAE	25.125986553469783	0.7262400895305658	3				NaN	NaN	0	NaN	259	2534	2792
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2799	13.526	NaN	7863.2	30	0	2383.4	0.214	+			14340	GTAAKSITK	9	63	438.76140957753387	875.5082662218678	2	438.7613525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTAAKSITK_	ENSG00000133574|ENST00000255945|GIMAP4	163.1509380574825	0.003936019289634439	3				NaN	NaN	0	NaN	260	2537	2798
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2800	13.53	NaN	1527.7	30	0	442.71	0.035				-1	VSSCTPKKK	9	40	517.7869592328979	1033.5593655325956	2	517.7877197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_VSSC(Carbamidomethyl (C))TPKKK_	CFAP47|p.H2345Afs*15|1|0.09|ENSG00000165164|chrX:36236809-36236810|-/A|frameshift_variant;CFAP47|p.P2326Tfs*34|1|0.26|ENSG00000165164|chrX:36236751-36236752|-/A|frameshift_variant;ENSG00000165164|ENST00000378653|CFAP47;nc|ENSG00000165164|Q6ZTR5-6|CFAP47	32.81241826257853	0.4965981579233955	3				NaN	NaN	0	NaN	261	2537	2798
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2804	13.544	NaN	2294.9	30	0	755.86	0.144	+			19634	KDKEACVHK	9	54	529.2766829804017	NaN	0	529.276123046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KDKEACVHK_	ENSG00000091513|ENST00000402696|TF;ENST00000461695.1_1_3:133489395-133497461:+|nuORF;ENST00000467842.1_1_3:133494266-133496087:+|nuORF;nc|ENSG00000091513|P02787|TF	77.31757898189308	0.08057531075035683	3				NaN	NaN	0	NaN	262	2540	2803
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2809	13.56	NaN	1774.6	30	0	358.49	0.142			+	23902	LDKKSVQL	8	45	465.7849543997048	929.5553558662097	2	465.7845764160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LDKKSVQL_	REV__THAP9|p.R152Dfs*5|1|0.05|ENSG00000168152|chr4:82906495-82906495|A/-|frameshift_variant	62.107414245175825	0.4809183816468817	3				NaN	NaN	0	NaN	264	2543	2808
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2814	13.576	NaN	3734.1	30	0	1614.9	0.214	+			21527	KNSKIIHR	8	47	498.3100210956282	994.6054892580564	2	498.30926513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KNSKIIHR_	ENST00000397620.6_1_15:37391393-37391546:-|nuORF	21.9598887501803	0.7897753010812679	3				NaN	NaN	0	NaN	266	2546	2813
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2815	13.58	NaN	953.06	30	0	109.27	0.035			+	-1	MVLMARIGL	9	43	510.2903384416245	NaN	0	510.2906188964844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_MVLM(Oxidation (M))ARIGL_	REV__sp|F5H9Z4|UL20_HCMVMMembraneproteinUL20OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL20PE=3SV=1;REV__sp|P16758|UL20_HCMVAUncharacterizedproteinUL20OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL20PE=3SV=1	24.20275056022122	0.35506675290109213	3				NaN	NaN	0	NaN	267	2546	2813
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2821	13.596	NaN	1530.6	30	0	447.72	0.146			+	47476	VQAVAVLCTCF	11	31	385.19679012294455	NaN	0	385.19671630859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VQAVAVLCTCF_	REV__ENST00000373795.6_1_1:29474819-29474921:-|nuORF	37.50817390946774	0.39825797133360086	3				NaN	NaN	0	NaN	270	2549	2820
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2828	13.614	NaN	4709	30	0	958.61	0.214	+			21275	KLNVEVKK	8	68	479.30905940605	956.6035658789	2	479.3085021972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KLNVEVKK_	ENSG00000121297|ENST00000240587|TSHZ3;TSHZ3|p.A877Pfs*28|1|0.2|ENSG00000121297|chr19:31277164-31277164|C/-|frameshift_variant;TSHZ3|p.D475N|1|0.27|ENSG00000121297|chr19:31278370-31278370|C/T|missense_variant;TSHZ3|p.D489Tfs*19|1|0.23|ENSG00000121297|chr19:31278329-31278329|T/-|frameshift_variant;TSHZ3|p.E1034Rfs*45|1|0.07|ENSG00000121297|chr19:31276694-31276694|G/-|frameshift_variant;TSHZ3|p.M1028Nfs*30|1|0.15|ENSG00000121297|chr19:31276710-31276711|-/T|frameshift_variant;TSHZ3|p.P674Rfs*22|1|0.36|ENSG00000121297|chr19:31277772-31277772|G/-|frameshift_variant	84.9155231211612	0.2928622555056503	3				NaN	NaN	0	NaN	274	2552	2827
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2829	13.618	NaN	1671.6	30	0	412.44	0.106	+			48321	VTFNGLNQM	9	43	512.2517508214377	1022.4889487096754	2	512.2518920898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTFNGLNQM_	ENSG00000011465|ENST00000052754|DCN	29.14955571784316	0.5308295550522326	3				NaN	NaN	0	NaN	275	2552	2827
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2830	13.62	NaN	2347.4	30	0	759.8	0.033				-1	 	0	47	421.75909432272084	841.5036357122417	2	421.7593078613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	276	2552	2827
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2834	13.633	NaN	1463.2	30	0	220.71	0.142	+			38757	SSLRASTSK	9	45	468.7596107449239	935.5046685566479	2	468.7587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSLRASTSK_	ENSG00000137154|ENST00000380394|RPS6;ENST00000397390.3_1_9:19200348-19200429:-|nuORF;ENST00000498815.1_1_9:19376293-19376674:-|nuORF	70.8162118820467	0.13725933411854815	3				NaN	NaN	0	NaN	277	2555	2833
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2838	13.649	NaN	3902.8	30	0	687.29	0.214			+	8335	EAKRNGTTV	9	50	488.2650860933191	974.5156192534382	2	488.264404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EAKRNGTTV_	REV__ENSG00000125089|ENST00000245105|SH3TC1;REV__ENST00000502350.5_1_4:8234964-8242679:+|nuORF;REV__ENST00000502559.1_1_4:8237989-8238388:+|nuORF;REV__ENST00000506360.5_1_4:8234964-8238388:+|nuORF;REV__ENST00000515682.5_1_4:8207046-8242679:+|nuORF	32.81241826257853	0.4965981579233955	3				NaN	NaN	0	NaN	278	2558	2837
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2839	13.653	NaN	1206.8	30	0	170.53	0.035				-1	CESDFETI	8	37	500.6996814420613	999.3848099509227	2	500.69921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_C(Carbamidomethyl (C))ESDFETI_	ENSG00000099308|ENST00000687212|MAST3;ENST00000608648.1_1_19:18220994-18239762:+|nuORF;nc|ENSG00000099308|O60307|MAST3	31.954861631926434	0.7126016770032289	3				NaN	NaN	0	NaN	279	2558	2837
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2848	13.684	NaN	3836.8	30	0	752.41	0.215			+	25708	LRNATDKLAQ	10	62	565.3208419727515	1128.627131012303	2	565.3204956054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LRNATDKLAQ_	REV__ENSG00000163931|ENST00000462138|TKT;REV__ENST00000483706.1_1_3:53276071-53289958:-|nuORF;REV__nc|ENSG00000163931|P29401-2|TKT	65.46538089061403	0.31613324008013116	3				NaN	NaN	0	NaN	282	2564	2847
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2849	13.688	NaN	2988.2	30	0	484.33	0.033	+			39265	STAQKAIGK	9	62	452.2671759852423	902.5197990372847	2	452.26715087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STAQKAIGK_	DPYSL3|p.A516Qfs*15|1|0.31|ENSG00000113657|chr5:147395638-147395638|G/-|frameshift_variant;ENSG00000113657|ENST00000343218|DPYSL3;nc|ENSG00000113657|Q14195|DPYSL3	51.52775601994872	0.28504342437107444	3				NaN	NaN	0	NaN	283	2564	2847
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2855	13.704	NaN	837.89	30	0	193.69	0.214	+			48807	VVADKSCEK	9	33	489.750674323213	977.486795713226	2	489.7502136230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVADKSCEK_	ENSG00000205220|ENST00000358514|PSMB10;ENST00000575556.1_1_16:67970119-67970555:-|nuORF	62.107414245175825	0.1960472003779324	3				NaN	NaN	0	NaN	286	2567	2854
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2856	13.708	NaN	1214.8	30	0	261.61	0.037			+	9418	EKIKKHFEA	9	17	377.21574190611346	NaN	0	377.21527099609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EKIKKHFEA_	REV__ENSG00000203666|ENST00000366523|EFCAB2;REV__ENST00000391837.7_1_1:245133075-245254818:+|nuORF;REV__nc|ENSG00000203666|Q5VUJ9-3|EFCAB2;REV__nc|ENSG00000203666|Q5VUJ9|EFCAB2	17.468008924990375	0.37786057458515737	3				NaN	NaN	0	NaN	287	2567	2854
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2865	13.74	NaN	4902.4	30	0	1624.2	0.214				-1	 	0	50	420.2225575637651	838.4305621943303	2	420.2223205566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	290	2573	2864
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2866	13.743	NaN	8022.6	30	0	844.26	0.106				-1	 	0	75	339.8736292391399	1016.5990583176198	3	339.8735046386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	291	2573	2864
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2867	13.745	NaN	3974.9	30	0	934.75	0.035	+			9480	EKRIAAALL	9	36	328.87821533281476	NaN	0	328.8785095214844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EKRIAAALL_	ENST00000351218.6_1_19:38138775-38145719:-|nuORF	38.80614096846853	0.28164298475537564	3				NaN	NaN	0	NaN	292	2573	2864
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2871	13.759	NaN	693.72	30	0	289.65	0.214			+	21847	KRILAVVD	8	26	457.29486083984375	NaN	0	457.29486083984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KRILAVVD_	REV__ENSG00000159399|ENST00000290573|HK2;REV__ENST00000447818.2_1_X:79828255-79829731:-|nuORF	18.324413293986947	1.7418937515398478	3				NaN	NaN	0	NaN	293	2576	2870
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2872	13.763	NaN	354.83	30	0	88.118	0.036	+			30962	QEPGENSEIL	10	20	558.2666657989873	NaN	0	558.2667846679688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QEPGENSEIL_	ENSG00000211445|ENST00000388825|GPX3;ENST00000517973.1_1_5:150400193-150407688:+|nuORF	15.641811463095205	0.4201028297492154	3				NaN	NaN	0	NaN	294	2576	2870
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2877	13.778	NaN	1964.9	30	0	233.62	0.142	+			40335	STTASLSKK	9	47	461.76423458558946	921.513916237979	2	461.76409912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STTASLSKK_	ENSG00000143363|ENST00000271620|PRUNE1;nc|ENSG00000143363|Q86TP1-2|PRUNE1;nc|ENSG00000143363|Q86TP1-3|PRUNE1;nc|ENSG00000143363|Q86TP1-4|PRUNE1;nc|ENSG00000143363|Q86TP1-5|PRUNE1;nc|ENSG00000143363|Q86TP1-6|PRUNE1;nc|ENSG00000143363|Q86TP1-7|PRUNE1	40.77816245573522	0.41113185337114944	3				NaN	NaN	0	NaN	296	2579	2876
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2883	13.796	NaN	2871	30	0	370.74	0.214	+			49294	VVQKKIAEK	9	64	521.8352510920263	1041.6559492508525	2	521.8353271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVQKKIAEK_	ENSG00000171045|ENST00000524325|TSNARE1;ENST00000518928.1_1_8:143381726-143407541:-|nuORF;nc|ENSG00000171045|Q96NA8-2|TSNARE1	69.6276240434122	0.14239879520340665	3				NaN	NaN	0	NaN	299	2582	2882
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2884	13.799	NaN	3518.3	30	0	288.33	0.036	+			25831	LSDQTKEKE	9	57	539.2757300774612	1076.5369072217222	2	539.2767333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSDQTKEKE_	ENSG00000106028|ENST00000265304|SSBP1	104.01359247289065	0.03510646158778409	3				NaN	NaN	0	NaN	300	2582	2882
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2890	13.815	NaN	6732.7	30	0	1098	0.214	+			16461	HETEQKRL	8	65	520.7781694423741	1039.541785951548	2	520.7785034179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HETEQKRL_	ENSG00000139644|ENST00000267115|TMBIM6;ENST00000553022.1_1_12:50146843-50152319:+|nuORF;nc|ENSG00000139644|P55061-2|TMBIM6	138.8255168832474	0.2537552148063804	3				NaN	NaN	0	NaN	303	2585	2889
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2891	13.819	NaN	1199.8	30	0	243.61	0.106	+			43552	THMSHLLR	8	48	497.7662002519017	NaN	0	497.76617431640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_THMSHLLR_	ENST00000547904.1_1_12:108297286-108297550:-|nuORF	30.503639358989545	1.7418937515398478	3				NaN	NaN	0	NaN	304	2585	2889
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2892	13.821	NaN	2394.2	30	0	461.49	0.106			+	24704	LHGAVGAG	8	47	341.1877545031732	680.3609560731464	2	341.1875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LHGAVGAG_	REV__ENST00000418088.5_2_1:3659748-3662908:-|nuORF;REV__ENST00000452079.5_2_1:3659748-3662767:-|nuORF	43.626045697637714	0.6338121648150432	3				NaN	NaN	0	NaN	305	2585	2889
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2893	13.823	NaN	2909.9	30	0	344.32	0.106	+			39554	STGGHPVVK	9	46	441.2454047051235	NaN	0	441.24542236328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STGGHPVVK_	ENSG00000072736|ENST00000346183|NFATC3;ENST00000379165.8_1_16:68119584-68225707:+|nuORF;ENST00000553077.5_1_16:68118971-68225707:+|nuORF;ENST00000563288.5_1_16:68120670-68248329:+|nuORF;ENST00000563319.5_1_16:68118971-68248329:+|nuORF;ENST00000569766.5_1_16:68118971-68260371:+|nuORF;nc|ENSG00000072736|Q12968-2|NFATC3;nc|ENSG00000072736|Q12968-3|NFATC3;nc|ENSG00000072736|Q12968-4|NFATC3;nc|ENSG00000072736|Q12968-5|NFATC3;nc|ENSG00000072736|Q12968-6|NFATC3;NFATC3|p.L634Sfs*2|1|0.27|ENSG00000072736|chr16:68174493-68174494|-/T|frameshift_variant	56.72105179125745	0.16330365735109603	3				NaN	NaN	0	NaN	306	2585	2889
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2894	13.825	NaN	1841.3	30	0	414.25	0.036				-1	VVMRDPQTK	9	35	545.2897330143277	1088.5649130954553	2	545.2894287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_VVM(Oxidation (M))RDPQTK_	ENSG00000170144|ENST00000392524|HNRNPA3;ENST00000437410.2_1_1:54441353-54441674:-|nuORF;ENST00000472163.1_1_3:75263799-75264780:+|nuORF;HNRNPA3|p.K200Rfs*147|1|0.13|ENSG00000170144|chr2:177216544-177216544|A/-|frameshift_variant;HNRNPA3|p.Y267Lfs*2|1|0.62|ENSG00000170144|chr2:177216918-177216919|-/T|frameshift_variant;nc|ENSG00000170144|P51991-2|HNRNPA3	22.579656572578934	0.5922287541734749	3				NaN	NaN	0	NaN	307	2585	2889
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2903	13.844	NaN	13955	30	0	2002.1	0.214	+			41444	SVNKASTVTK	10	83	517.7960729046636	1033.577592876127	2	517.7960815429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVNKASTVTK_	ENSG00000039523|ENST00000042381|RIPOR1;ENST00000569733.6_1_16:67575293-67580037:+|nuORF;nc|ENSG00000039523|Q6ZS17-3|RIPOR1;nc|ENSG00000039523|Q6ZS17-4|RIPOR1;nc|ENSG00000039523|Q6ZS17|RIPOR1	169.9932187642096	0.0036876354521960214	3				NaN	NaN	0	NaN	313	2588	2902
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2904	13.848	NaN	3650.2	30	0	909.49	0.106	+			49152	VVMGKQQSK	9	50	502.78163294056407	NaN	0	502.7814025878906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVMGKQQSK_	ENSG00000148225|ENST00000374193|WDR31;nc|ENSG00000148225|Q8NA23-2|WDR31	158.07458414430337	0.008991063192168403	3				NaN	NaN	0	NaN	314	2588	2902
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2905	13.85	NaN	2895.5	30	0	864.33	0.106	+			10241	ETKEMARK	8	51	496.7637864220914	NaN	0	496.76397705078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ETKEMARK_	ENSG00000160445|ENST00000291900|ZER1	37.15910966729921	1.7418937515398478	3				NaN	NaN	0	NaN	315	2588	2902
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2906	13.852	NaN	896.13	30	0	349.83	0.037	+			31965	QQTQNRMKL	9	25	573.8046672731532	1145.5947816131063	2	573.8046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QQTQNRMKL_	ENSG00000082805|ENST00000360905|ERC1;ENSG00000187672|ENST00000288221|ERC2;nc|ENSG00000082805|Q8IUD2-2|ERC1;nc|ENSG00000082805|Q8IUD2-3|ERC1;nc|ENSG00000082805|Q8IUD2-4|ERC1;nc|ENSG00000082805|Q8IUD2-5|ERC1	14.137123925751023	0.6112419832031292	3				NaN	NaN	0	NaN	316	2588	2902
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2914	13.871	NaN	1506.2	30	0	407.73	0.214	+			22633	KTVKDAVQK	9	41	508.8090006178479	1015.6034483024958	2	508.8087158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTVKDAVQK_	ENSG00000103510|ENST00000219797|KAT8;ENST00000539683.2_1_16:31129164-31131922:+|nuORF;KAT8|p.Y323Tfs*48|1|0.44|ENSG00000103510|chr16:31130315-31130315|C/-|frameshift_variant;nc|ENSG00000103510|Q9H7Z6-2|KAT8	53.08895987439943	0.27122541748218487	3				NaN	NaN	0	NaN	321	2591	2913
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2915	13.875	NaN	426.09	30	0	179.14	0.033	+			24501	LGIKISLR	8	24	450.3055419921875	NaN	0	450.3055419921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LGIKISLR_	ENST00000366812.5_1_1:226334087-226334237:-|nuORF	12.959181472943097	1.7418937515398478	3				NaN	NaN	0	NaN	322	2591	2913
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2920	13.889	NaN	1210.3	30	0	223.46	0.214			+	21401	KMNMLLKN	8	44	496.2738500119743	NaN	0	496.273681640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KMNMLLKN_	REV__MAP9|p.D594Ifs*82|1|0.15|ENSG00000164114|chr4:155352638-155352638|T/-|frameshift_variant	42.47446043378293	1.7418937515398478	3				NaN	NaN	0	NaN	324	2594	2919
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2921	13.893	NaN	3815.5	30	0	1013.5	0.106	+			6188	AVQPAPTRK	9	51	484.28830681607354	966.5620606989471	2	484.2876281738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVQPAPTRK_	ENSG00000109686|ENST00000604030|SH3D19;ENST00000478503.6_1_4:152043245-152086876:-|nuORF;nc|ENSG00000109686|Q5HYK7-2|SH3D19;nc|ENSG00000109686|Q5HYK7|SH3D19	67.49366992349736	0.1516260258713357	3				NaN	NaN	0	NaN	325	2594	2919
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2922	13.895	NaN	831.2	30	0	130.88	0.034				-1	MRSLPVLL	8	44	472.783203125	NaN	0	472.783203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))RSLPVLL_	ENST00000260327.8_1_15:44783041-44783125:+|nuORF	33.51558372728122	1.7418937515398478	3				NaN	NaN	0	NaN	326	2594	2919
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2929	13.912	NaN	8072.1	30	0	6440.3	0.214				-1	KERMPRDIK	9	30	396.88823005322297	1187.6428607598689	3	396.8874816894531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_KERM(Oxidation (M))PRDIK_	ENST00000602566.5_1_1:120594349-120596770:-|nuORF	31.529811441608018	0.5085848003137583	3				NaN	NaN	0	NaN	330	2597	2928
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2930	13.916	NaN	4642.1	30	0	1329.9	0.106			+	37191	SKATEEKEKP	10	45	382.8720133698075	1145.5942107096225	3	382.87115478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SKATEEKEKP_	REV__nc|ENSG00000130305|Q96P11-4|NSUN5	36.446750945000026	0.5818864909973037	3				NaN	NaN	0	NaN	331	2597	2928
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2931	13.918	NaN	741.42	30	0	525.91	0.106	+			26077	LSLTQAGRPRP	11	12	399.23531493642884	NaN	0	399.2351379394531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSLTQAGRPRP_	ENSG00000164694|ENST00000297267|FNDC1;FNDC1|p.T1443Nfs*81|2|0.16|ENSG00000164694|chr6:159239656-159239657|-/A|frameshift_variant;FNDC1|p.T1443Pfs*84|1|0.31|ENSG00000164694|chr6:159239657-159239657|A/-|frameshift_variant;nc|ENSG00000164694|Q4ZHG4-2|FNDC1	14.086013023434994	0.456735970842152	3				NaN	NaN	0	NaN	332	2597	2928
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2932	13.919	NaN	2795.9	30	0	834.38	0.106	+			11315	FKYFMVLIQ	9	49	594.8285670160478	1187.6425810988956	2	594.827880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FKYFMVLIQ_	ENSG00000129003|ENST00000644861|VPS13C;nc|ENSG00000129003|Q709C8-2|VPS13C;nc|ENSG00000129003|Q709C8-3|VPS13C;nc|ENSG00000129003|Q709C8-4|VPS13C;VPS13C|p.P3597Lfs*3|1|0.26|ENSG00000129003|chr15:61868732-61868732|G/-|frameshift_variant	37.81151784470057	0.4459294069877048	3				NaN	NaN	0	NaN	333	2597	2928
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2933	13.921	NaN	1826.7	30	0	339.77	0.106	+			8159	EAAKLAKMK	9	51	495.29484449937775	NaN	0	495.2947692871094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EAAKLAKMK_	ENSG00000110619|ENST00000380525|CARS1;ENST00000526890.5_1_11:3022346-3038536:-|nuORF;ENST00000531387.5_1_11:3022346-3069017:-|nuORF;nc|ENSG00000110619|P49589-2|CARS1;nc|ENSG00000110619|P49589|CARS1	44.116797842482775	0.2472372736944149	3				NaN	NaN	0	NaN	334	2597	2928
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2934	13.923	NaN	1560.4	30	0	567.57	0.035	+			17927	IGKSHQGLK	9	24	323.1942428063971	NaN	0	323.1940612792969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IGKSHQGLK_	CPXM2|p.A711Pfs*35|1|0.36|ENSG00000121898|chr10:123746904-123746904|C/-|frameshift_variant;CPXM2|p.G655Efs*9|1|0.31|ENSG00000121898|chr10:123754718-123754718|T/-|frameshift_variant;ENSG00000121898|ENST00000241305|CPXM2;ENST00000368854.7_1_10:125528237-125699754:-|nuORF	19.359975847455235	0.3714571876404798	3				NaN	NaN	0	NaN	335	2597	2928
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2939	13.937	NaN	5679.5	30	0	981.23	0.214			+	21062	KKLFAPTQK	9	59	530.8281506597708	1059.6417483863415	2	530.8282470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KKLFAPTQK_	REV__ENSG00000174145|ENST00000309447|NWD2;REV__NWD2|p.D1262Gfs*18|1|0.39|ENSG00000174145|chr4:37445769-37445770|-/G|frameshift_variant;REV__NWD2|p.E713Rfs*7|1|0.36|ENSG00000174145|chr4:37444124-37444124|G/-|frameshift_variant;REV__NWD2|p.K1317Nfs*43|1|0.35|ENSG00000174145|chr4:37445936-37445936|A/-|frameshift_variant;REV__NWD2|p.W1259Gfs*22|4|0.26|ENSG00000174145|chr4:37445757-37445757|T/-|frameshift_variant	61.691277971877994	0.19951612995419254	3				NaN	NaN	0	NaN	337	2600	2938
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2940	13.941	NaN	3769.4	30	0	676.54	0.106	+			11679	FQYTISNQL	9	60	557.2816796862381	1112.5488064392762	2	557.2815551757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FQYTISNQL_	ENST00000540651.5_1_1:228286658-228286874:+|nuORF	68.84614121027924	0.14577793175421136	3				NaN	NaN	0	NaN	338	2600	2938
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2941	13.943	NaN	1950.7	30	0	184.09	0.106	+			43283	TFGKKKGPNA	10	48	524.3015218737695	1046.588490814339	2	524.3011474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TFGKKKGPNA_	ENSG00000149806|ENST00000529639|FAU	94.4091291819064	0.10583072883246657	3				NaN	NaN	0	NaN	339	2600	2938
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2942	13.944	NaN	9395.8	30	0	3676.7	0.035				-1	ATMKTLTID	9	46	337.17892979312654	1008.5149599795797	3	337.1788635253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_ATM(Oxidation (M))KTLTID_	ENSG00000157184|ENST00000371486|CPT2	19.996771675451527	0.6112419832031292	3				NaN	NaN	0	NaN	340	2600	2938
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2949	13.961	NaN	1680	30	0	255.14	0.214			+	9495	EKTKFPALG	9	54	495.7831214040728	989.5516898749456	2	495.78302001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EKTKFPALG_	REV__ENSG00000099290|ENST00000282633|WASHC2A;REV__ENSG00000172661|ENST00000623400|WASHC2C;REV__ENST00000471102.1_1_10:46281927-46282167:+|nuORF	52.936696900407355	0.27249468807391813	3				NaN	NaN	0	NaN	344	2603	2948
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2950	13.964	NaN	2100.9	30	0	478.73	0.037	+			30076	PQLREENDL	9	46	371.8566589355469	NaN	0	371.8566589355469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PQLREENDL_	ENSG00000154767|ENST00000285021|XPC;nc|ENSG00000154767|Q01831-2|XPC	37.15910966729921	0.2899585034171616	3				NaN	NaN	0	NaN	345	2603	2948
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2958	13.984	NaN	5728.6	30	0	1110.9	0.145	+			34208	RTDTASRLK	9	49	349.8685308052611	NaN	0	349.8686218261719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTDTASRLK_	ENSG00000054654|ENST00000555002|SYNE2;ENST00000394768.6_2_14:64542710-64692241:+|nuORF;ENST00000554805.6_2_14:64676062-64692241:+|nuORF;ENST00000555022.5_2_14:64671104-64692241:+|nuORF;nc|ENSG00000054654|Q8WXH0-13|SYNE2;nc|ENSG00000054654|Q8WXH0-3|SYNE2;nc|ENSG00000054654|Q8WXH0-4|SYNE2;nc|ENSG00000054654|Q8WXH0-7|SYNE2;nc|ENSG00000054654|Q8WXH0|SYNE2;SYNE2|p.S6651Rfs*83|1|0.29|ENSG00000054654|chr14:64220596-64220597|-/G|frameshift_variant	58.2462437865262	0.1567987007793744	3				NaN	NaN	0	NaN	350	2606	2957
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2975	14.037	NaN	4589.1	30	0	620.3	0.144	+			33997	RSGSSSSRSLG	11	66	540.7724258896606	1079.530298846121	2	540.772216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RSGSSSSRSLG_	ENSG00000102837|ENST00000219022|OLFM4	58.22992032128504	0.3392555181951113	3				NaN	NaN	0	NaN	358	2615	2974
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2983	14.058	NaN	2514.2	30	0	685.33	0.214	+			36895	SIHGRPVTK	9	53	497.7940363963644	993.5735198595288	2	498.29522705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIHGRPVTK_	ENSG00000138640|ENST00000264344|FAM13A;ENST00000508360.5_1_4:89653076-89671014:-|nuORF;ENST00000511573.5_1_4:89649686-89680064:-|nuORF;FAM13A|p.E827K|1|0.28|ENSG00000138640|chr4:88739113-88739113|C/T|missense_variant;nc|ENSG00000138640|O94988-1|FAM13A;nc|ENSG00000138640|O94988-3|FAM13A;nc|ENSG00000138640|O94988-5|FAM13A;nc|ENSG00000138640|O94988-6|FAM13A	98.58198989935565	0.04066992115528678	3				NaN	NaN	0	NaN	363	2618	2982
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2984	14.061	NaN	1549.7	30	0	414.17	0.037	+			7624	DKGSSSHNKPK	11	49	592.8051063394314	NaN	0	592.8048095703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DKGSSSHNKPK_	CYLD|p.I702*|1|0.1|ENSG00000083799|chr16:50787844-50787844|A/-|frameshift_variant;CYLD|p.N722Mfs*13|3|0.37|ENSG00000083799|chr16:50791608-50791608|A/-|frameshift_variant;CYLD|p.T340Nfs*11|1|0.11|ENSG00000083799|chr16:50776272-50776273|-/AAAT|frameshift_variant;ENSG00000083799|ENST00000427738|CYLD;ENST00000563629.1_1_16:50783909-50820919:+|nuORF;ENST00000563976.1_1_16:50810130-50811860:+|nuORF;ENST00000569891.5_1_16:50783609-50818363:+|nuORF;nc|ENSG00000083799|Q9NQC7-2|CYLD	42.86426827375447	0.36657022113551535	3				NaN	NaN	0	NaN	364	2618	2982
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2988	14.075	NaN	5336.9	30	0	2317.1	0.214			+	47801	VSIHQRSEG	9	38	338.17716150936906	NaN	0	338.17706298828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSIHQRSEG_	REV__ENSG00000112320|ENST00000317357|SOBP;REV__ENST00000477448.1_1_6:107811820-107879187:+|nuORF;REV__SOBP|p.P463Rfs*31|1|0.33|ENSG00000112320|chr6:107634227-107634227|C/-|frameshift_variant	45.97224482568171	0.23445038899310136	3				NaN	NaN	0	NaN	365	2621	2987
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2989	14.079	NaN	1040.3	30	0	157.48	0.034	+			3873	ATAPAPTAHK	10	41	482.7644852417897	963.5144175503794	2	482.7626037597656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATAPAPTAHK_	ENSG00000184897|ENST00000333762|H1-10	28.081489160057373	0.6505064946289502	3				NaN	NaN	0	NaN	366	2621	2987
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3001	14.113	NaN	13091	30	0	3324	0.214	+			6171	AVQKKTFTK	9	74	525.8193891464238	1049.6242253596474	2	525.8201293945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVQKKTFTK_	ENSG00000115306|ENST00000356805|SPTBN1;ENSG00000160460|ENST00000598249|SPTBN4;ENSG00000173898|ENST00000533211|SPTBN2;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1;nc|ENSG00000160460|Q9H254-2|SPTBN4;nc|ENSG00000160460|Q9H254-4|SPTBN4;nc|ENSG00000173898|O15020-2|SPTBN2;SPTBN1|p.K503Rfs*24|1|0.06|ENSG00000115306|chr2:54626095-54626095|G/-|frameshift_variant;SPTBN2|p.P924Qfs*35|1|0.39|ENSG00000173898|chr11:66701629-66701629|G/-|frameshift_variant	125.68205650279488	0.017759985800556374	3				NaN	NaN	0	NaN	372	2627	3000
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3002	14.116	NaN	14902	30	0	2275.9	0.036	+			6172	AVQKKTFTK	9	69	350.8820810251839	1049.6244136757516	3	350.8819885253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVQKKTFTK_	ENSG00000115306|ENST00000356805|SPTBN1;ENSG00000160460|ENST00000598249|SPTBN4;ENSG00000173898|ENST00000533211|SPTBN2;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1;nc|ENSG00000160460|Q9H254-2|SPTBN4;nc|ENSG00000160460|Q9H254-4|SPTBN4;nc|ENSG00000173898|O15020-2|SPTBN2;SPTBN1|p.K503Rfs*24|1|0.06|ENSG00000115306|chr2:54626095-54626095|G/-|frameshift_variant;SPTBN2|p.P924Qfs*35|1|0.39|ENSG00000173898|chr11:66701629-66701629|G/-|frameshift_variant	117.81106730687013	0.02252488733980868	3				NaN	NaN	0	NaN	373	2627	3000
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3009	14.134	NaN	1846.9	30	0	273.69	0.214	+			39078	SSSSKTFEK	9	52	500.75172461547703	999.4888962977541	2	500.7508239746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSSSKTFEK_	ENSG00000112742|ENST00000369798|TTK;nc|ENSG00000112742|P33981-2|TTK;TTK|p.R854Gfs*10|1|0.26|ENSG00000112742|chr6:80042180-80042181|AA/-|frameshift_variant;TTK|p.R854Gfs*39|1|0.4|ENSG00000112742|chr6:80042180-80042180|A/-|frameshift_variant	91.26522074875469	0.06129826844580791	3				NaN	NaN	0	NaN	377	2630	3008
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3010	14.138	NaN	2872.1	30	0	1213.2	0.035	+			9409	EKGWKVRI	8	42	508.30470239147945	1014.5948518497589	2	508.3041076660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EKGWKVRI_	tr|U7STL0|U7STL0_FUSNUSporephotoproductlyaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01098PE=4SV=1	31.529811441608018	0.715883593221515	3				NaN	NaN	0	NaN	378	2630	3008
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3014	14.152	NaN	5295.4	30	0	1742.8	0.214	+			13958	GSAKPGLQK	9	55	443.261785530209	884.509018127218	2	443.2609558105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSAKPGLQK_	ENSG00000104267|ENST00000285379|CA2	98.62937762414208	0.04060045538121712	3				NaN	NaN	0	NaN	379	2633	3013
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3015	14.156	NaN	2161.1	30	0	654.87	0.031	+			12083	GAAKKVPA	8	40	371.23475360566823	740.4549542781365	2	371.2339172363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GAAKKVPA_	ENSG00000173805|ENST00000347901|HAP1;nc|ENSG00000173805|P54257-3|HAP1;nc|ENSG00000173805|P54257-4|HAP1;nc|ENSG00000173805|P54257|HAP1	21.70233525837049	0.7917639344264583	3				NaN	NaN	0	NaN	380	2633	3013
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3023	14.175	NaN	1251.2	30	0	260.38	0.212			+	-1	CEIFSLAAEAY	11	40	637.2931772587555	1272.5718015843108	2	637.2920532226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_C(Carbamidomethyl (C))EIFSLAAEAY_	REV__ENSG00000144218|ENST00000672756|AFF3;REV__nc|ENSG00000144218|P51826-2|AFF3	32.81241826257853	0.645615689454792	3				NaN	NaN	0	NaN	385	2636	3022
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3024	14.179	NaN	3037.7	30	0	1339.1	0.106	+			40188	STRARSKLP	9	32	339.20529777820985	1014.5940639348296	3	339.5392761230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STRARSKLP_	ENSG00000135720|ENST00000258198|DYNC1LI2;nc|ENSG00000135720|O43237-2|DYNC1LI2	18.324413293986947	0.6112419832031293	3				NaN	NaN	0	NaN	386	2636	3022
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3025	14.181	NaN	791.33	30	0	241.34	0.034	+			44614	TTDVQKKK	8	43	474.2794917688006	NaN	0	474.27880859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TTDVQKKK_	ENSG00000183421|ENST00000332512|RIPK4;nc|ENSG00000183421|P57078|RIPK4;RIPK4|p.P522Rfs*90|1|0.29|ENSG00000183421|chr21:41741772-41741772|G/-|frameshift_variant	53.351449002276354	1.7418937515398478	3				NaN	NaN	0	NaN	387	2636	3022
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3031	14.197	NaN	1770.2	30	0	210.04	0.214	+			5112	ATSQQPLRK	9	55	514.796468406553	1027.578383879906	2	514.7966918945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSQQPLRK_	ENSG00000164402|ENST00000378719|SEPTIN8;nc|ENSG00000164402|Q92599-2|SEPTIN8;nc|ENSG00000164402|Q92599-3|SEPTIN8;nc|ENSG00000164402|Q92599-4|SEPTIN8	52.936696900407355	0.27249468807391813	3				NaN	NaN	0	NaN	390	2639	3030
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3032	14.2	NaN	3438.2	30	0	764.49	0.036	+			15154	GTSETSKTLK	10	57	526.2864604878338	1050.5583680424675	2	526.2869873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTSETSKTLK_	ENSG00000153201|ENST00000283195|RANBP2;RANBP2|p.C2737Vfs*35|1|0.18|ENSG00000153201|chr2:108772957-108772957|T/-|frameshift_variant;RANBP2|p.F3068Lfs*10|1|0.06|ENSG00000153201|chr2:108782692-108782692|T/-|frameshift_variant;RANBP2|p.H3114Sfs*18|1|0.33|ENSG00000153201|chr2:108782827-108782828|-/T|frameshift_variant;RANBP2|p.K1989Nfs*9|1|0.05|ENSG00000153201|chr2:108766505-108766506|-/TATCCTG|frameshift_variant;RANBP2|p.K2576Nfs*63|2|0.22|ENSG00000153201|chr2:108768262-108768262|A/-|frameshift_variant	77.53327743719008	0.21577387331637743	3				NaN	NaN	0	NaN	391	2639	3030
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3038	14.215	NaN	4230.4	30	0	358.77	0.143			+	34679	RVSRFDKK	8	61	518.3074203447048	1034.6002877562096	2	518.307373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVSRFDKK_	REV__ENSG00000188157|ENST00000379370|AGRN;REV__nc|ENSG00000188157|O00468-2|AGRN;REV__nc|ENSG00000188157|O00468-3|AGRN;REV__nc|ENSG00000188157|O00468-4|AGRN;REV__nc|ENSG00000188157|O00468-5|AGRN;REV__nc|ENSG00000188157|O00468-7|AGRN;REV__nc|ENSG00000188157|O00468|AGRN	63.30626980617807	0.4690498839812213	3				NaN	NaN	0	NaN	394	2642	3037
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3045	14.235	NaN	3463.2	30	0	659.97	0.214	+			21698	KQFYSLLVT	9	60	549.8144122592074	1097.6142715852147	2	549.8151245117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KQFYSLLVT_	ENSG00000061987|ENST00000393630|MON2;ENST00000547095.5_1_12:62864501-62986526:+|nuORF;MON2|p.A1027Vfs*94|1|0.03|ENSG00000061987|chr12:62553043-62553044|-/TTCTTTTT|frameshift_variant;MON2|p.E989Nfs*2|1|0.16|ENSG00000061987|chr12:62552924-62552924|A/-|frameshift_variant;MON2|p.T1274Qfs*3|1|0.36|ENSG00000061987|chr12:62560894-62560894|T/-|frameshift_variant;MON2|p.V1435Afs*17|1|0.03|ENSG00000061987|chr12:62566430-62566431|-/CATCT|frameshift_variant;nc|ENSG00000061987|Q7Z3U7-2|MON2;nc|ENSG00000061987|Q7Z3U7-5|MON2;nc|ENSG00000061987|Q7Z3U7-6|MON2	88.17693792209575	0.07000514020414955	3				NaN	NaN	0	NaN	398	2645	3044
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3046	14.238	NaN	8080.2	30	0	1714.4	0.106	+			22018	KSGPVIAKR	9	64	478.3065258479641	954.5984987627282	2	478.30645751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KSGPVIAKR_	ENSG00000109920|ENST00000263773|FNBP4;FNBP4|p.G931Efs*17|1|0.32|ENSG00000109920|chr11:47722991-47722991|T/-|frameshift_variant;FNBP4|p.K790Efs*7|1|0.34|ENSG00000109920|chr11:47724123-47724124|TT/-|frameshift_variant;FNBP4|p.P715Hfs*26|1|0.51|ENSG00000109920|chr11:47724643-47724643|G/-|frameshift_variant;FNBP4|p.W950Vfs*7|1|0.22|ENSG00000109920|chr11:47720045-47720046|-/T|frameshift_variant;nc|ENSG00000109920|Q8N3X1-2|FNBP4	93.5975768576971	0.05472259948179787	3				NaN	NaN	0	NaN	399	2645	3044
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3047	14.24	NaN	5213.5	30	0	1833.3	0.106	+			35321	SANCKLRK	8	34	326.18245092418385	975.5255233727516	3	326.1824951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SANC(Carbamidomethyl (C))KLRK_	ENSG00000163689|ENST00000482387|CFAP20DC;nc|ENSG00000163689|Q6ZVT6-2|CFAP20DC;nc|ENSG00000163689|Q6ZVT6|CFAP20DC	44.116797842482775	0.6307669463330267	3				NaN	NaN	0	NaN	400	2645	3044
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3048	14.242	NaN	1785.9	30	0	392.85	0.106	+			33514	RKPILFDAK	9	59	544.3336181640625	NaN	0	544.3336181640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RKPILFDAK_	tr|U7STE3|U7STE3_FUSNUUPF0313proteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01317PE=3SV=1	36.446750945000026	0.29355505452396785	3				NaN	NaN	0	NaN	401	2645	3044
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3049	14.244	NaN	6091.9	30	0	3063	0.106			+	19353	KAKRHMEAK	9	45	366.87851050268137	1097.613702108244	3	367.21307373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KAKRHMEAK_	REV__ARCN1|p.R160H|1|0.39|ENSG00000095139|chr11:118583840-118583840|G/A|missense_variant	47.657333605630114	0.33044192980041115	3				NaN	NaN	0	NaN	402	2645	3044
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3050	14.245	NaN	680.28	30	0	75.643	0.106	+			12692	GEKGTGKTL	9	33	445.75140380859375	NaN	0	445.75140380859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GEKGTGKTL_	ENSG00000132676|ENST00000368336|DAP3;ENST00000462002.5_1_1:155679570-155696073:+|nuORF;ENST00000471523.1_1_1:155679570-155695881:+|nuORF;nc|ENSG00000132676|P51398-2|DAP3;nc|ENSG00000132676|P51398-3|DAP3	52.936696900407355	0.1864545979552969	3				NaN	NaN	0	NaN	403	2645	3044
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3051	14.247	NaN	440.99	30	0	34.079	0.034	+			24036	LEFLENAK	8	31	482.259765625	NaN	0	482.259765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LEFLENAK_	ENSG00000159023|ENST00000343067|EPB41;EPB41|p.K805Rfs*3|1|0.19|ENSG00000159023|chr1:29109433-29109433|C/-|frameshift_variant;EPB41|p.T582Qfs*11|1|0.24|ENSG00000159023|chr1:29053205-29053205|A/-|frameshift_variant;nc|ENSG00000159023|P11171-2|EPB41;nc|ENSG00000159023|P11171-3|EPB41;nc|ENSG00000159023|P11171-4|EPB41;nc|ENSG00000159023|P11171-5|EPB41;nc|ENSG00000159023|P11171-6|EPB41;nc|ENSG00000159023|P11171-7|EPB41	23.04248740728303	1.7418937515398478	3				NaN	NaN	0	NaN	404	2645	3044
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3063	14.272	NaN	55508	30	0	14838	0.214	+			15383	GTYDAKVKK	9	54	337.1942319666125	1008.5608665000375	3	337.19403076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTYDAKVKK_	ENSG00000159713|ENST00000393957|TPPP3	35.61828744233558	0.47037581924408073	3				NaN	NaN	0	NaN	413	2648	3062
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3064	14.276	NaN	14587	30	0	3079.1	0.106	+			15384	GTYDAKVKK	9	56	505.28769859560134	1008.5608442580027	2	505.287353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTYDAKVKK_	ENSG00000159713|ENST00000393957|TPPP3	93.1432384553994	0.056003526918089595	3				NaN	NaN	0	NaN	414	2648	3062
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3065	14.278	NaN	15990	30	0	3865.4	0.106			+	15658	GVLYGQVGAK	10	57	331.1907040463422	990.5502827392266	3	331.1904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GVLYGQVGAK_	REV__ENST00000555105.1_1_14:92497081-92506164:-|nuORF;REV__ENST00000558190.5_1_14:92505726-92506164:-|nuORF	45.9519527083369	0.4943008177357963	3				NaN	NaN	0	NaN	415	2648	3062
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3066	14.28	NaN	4285	30	0	1439.4	0.106			+	20738	KGTSAKIF	8	49	426.25312190794153	850.4916908826831	2	426.252685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KGTSAKIF_	REV__tr|U7ST00|U7ST00_FUSNUNagDproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01658PE=3SV=1	63.30626980617807	0.4690498839812213	3				NaN	NaN	0	NaN	416	2648	3062
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3067	14.282	NaN	526.53	30	0	113.23	0.106			+	-1	SASGCRVA	8	24	404.1907653808594	NaN	0	404.1907653808594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_SASGC(Carbamidomethyl (C))RVA_	REV__nc|ENSG00000188877|Q6S8J7|POTEA	24.20275056022122	1.7418937515398478	3				NaN	NaN	0	NaN	417	2648	3062
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3068	14.283	NaN	668.79	30	0	148.37	0.037	+			25364	LPGEHGIPGKQ	11	29	566.8074340820312	NaN	0	566.8074340820312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LPGEHGIPGKQ_	COL19A1|p.G753Afs*32|1|0.15|ENSG00000082293|chr6:70156686-70156686|G/-|frameshift_variant;COL19A1|p.G807Wfs*14|1|0.34|ENSG00000082293|chr6:70165952-70165953|-/C|frameshift_variant;COL19A1|p.S585Afs*8|1|0.2|ENSG00000082293|chr6:70144987-70144987|A/-|frameshift_variant;ENSG00000082293|ENST00000620364|COL19A1	19.262678746197807	0.456735970842152	3				NaN	NaN	0	NaN	418	2648	3062
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3069	14.284	NaN	2090.6	30	0	610.91	0.141			+	19683	KDPNAIAFGV	10	49	516.2786008277407	1030.5426487222812	2	516.2786865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KDPNAIAFGV_	REV__tr|U7STZ4|U7STZ4_FUSNU1-deoxy-D-xylulose-5-phosphatesynthaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=dxsPE=3SV=1	37.15910966729921	0.575322462179216	3				NaN	NaN	0	NaN	419	2648	3062
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3080	14.309	NaN	2737.3	30	0	529.68	0.214	+			20039	KEKAKETAL	9	56	509.30054244085954	1016.5865319485191	2	509.3001708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEKAKETAL_	ENSG00000169230|ENST00000303204|PRELID1;ENST00000503853.1_1_5:176733373-176733568:+|nuORF;ENST00000567272.1_1_6:126965256-126965442:+|nuORF;nc|ENSG00000169230|Q9Y255-2|PRELID1	52.936696900407355	0.27249468807391813	3				NaN	NaN	0	NaN	427	2651	3079
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3081	14.313	NaN	982.94	30	0	168.65	0.106	+			44674	TTHITKTVK	9	44	514.8089599609375	NaN	0	514.8089599609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTHITKTVK_	ENSG00000079819|ENST00000337057|EPB41L2;ENSG00000082397|ENST00000341928|EPB41L3;ENST00000368126.2_1_6:131179278-131186801:-|nuORF;ENST00000452150.6_1_6:131179278-131188835:-|nuORF;nc|ENSG00000079819|O43491-3|EPB41L2;nc|ENSG00000079819|O43491-4|EPB41L2;nc|ENSG00000082397|Q9Y2J2-2|EPB41L3;nc|ENSG00000082397|Q9Y2J2-4|EPB41L3	43.650786325866115	0.2504488100985368	3				NaN	NaN	0	NaN	428	2651	3079
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3082	14.315	NaN	7356.3	30	0	2088.9	0.106	+			31478	QLAELLFAL	9	43	339.86974968783	1016.5874196636901	3	339.8692932128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QLAELLFAL_	ENSG00000135637|ENST00000393965|CCDC142;nc|ENSG00000135637|Q17RM4-2|CCDC142;nc|ENSG00000135637|Q17RM4-3|CCDC142	58.78195531508484	0.22376836668196862	3				NaN	NaN	0	NaN	429	2651	3079
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3083	14.316	NaN	3047.5	30	0	455.21	0.106	+			23131	KVVVSPTKK	9	52	493.32425004333794	984.6339471534759	2	493.3235778808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KVVVSPTKK_	ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232323706-232327997:-|nuORF	98.58198989935565	0.04066992115528678	3				NaN	NaN	0	NaN	430	2651	3079
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3084	14.318	NaN	1143.8	30	0	121.72	0.106	+			31	AAAKPTPPK	9	43	440.7659816764351	NaN	0	440.7660827636719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AAAKPTPPK_	ENSG00000159140|ENST00000356577|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-4|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-7|SON;nc|ENSG00000159140|P18583-9|SON	87.69643885390035	0.04624013146650493	3				NaN	NaN	0	NaN	431	2651	3079
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3085	14.32	NaN	445.34	30	0	159.59	0.106			+	43526	TGTKNVSSL	9	29	453.7474670410156	NaN	0	453.7474670410156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TGTKNVSSL_	REV__ENSG00000076356|ENST00000367033|PLXNA2;REV__nc|ENSG00000076356|O75051-2|PLXNA2	37.15910966729921	0.2899585034171616	3				NaN	NaN	0	NaN	432	2651	3079
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3086	14.322	NaN	384.89	30	0	33.107	0.035			+	-1	RCLPFATTA	9	29	518.7640991210938	NaN	0	518.7640991210938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_RC(Carbamidomethyl (C))LPFATTA_	REV__CUL9|p.R357Efs*138|1|0.33|ENSG00000112659|chr6:43186268-43186268|C/-|frameshift_variant;REV__ENST00000451399.5_1_6:43153996-43155469:+|nuORF	17.364965105453717	0.37820932774828947	3				NaN	NaN	0	NaN	433	2651	3079
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3093	14.338	NaN	9953.4	30	0	1822.3	0.214			+	38904	SSPPPCQLTPG	11	76	542.2627271143341	1082.510901295468	2	542.2628173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSPPPCQLTPG_	REV__ENSG00000125505|ENST00000245615|MBOAT7;REV__nc|ENSG00000125505|Q96N66-2|MBOAT7;REV__nc|ENSG00000125505|Q96N66-3|MBOAT7	88.17693792209575	0.10623774136611049	3				NaN	NaN	0	NaN	437	2654	3092
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3094	14.342	NaN	7023.3	30	0	3015.6	0.106	+			3753	ATAEKCLHK	9	65	500.7661691363563	999.5177853395127	2	500.765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATAEKCLHK_	ENSG00000180098|ENST00000373830|TRNAU1AP;ENST00000464880.5_1_1:28879622-28887433:+|nuORF;ENST00000480930.5_1_1:28879622-28887666:+|nuORF;ENST00000484775.1_1_1:28887181-28904036:+|nuORF;ENST00000491577.5_1_1:28879622-28887259:+|nuORF;ENST00000495995.5_1_1:28880088-28887666:+|nuORF;TRNAU1AP|p.Q222Sfs*29|1|0.24|ENSG00000180098|chr1:28571305-28571305|C/-|frameshift_variant	95.81516180277367	0.04847050768394289	3				NaN	NaN	0	NaN	438	2654	3092
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3095	14.344	NaN	2892.9	30	0	481.78	0.106	+			21166	KKVPVTKSQP	10	56	556.346040431646	1110.6775279300919	2	556.3453369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KKVPVTKSQP_	ENST00000436970.5_1_16:87993584-88008722:+|nuORF	79.71258880314673	0.19796908725841375	3				NaN	NaN	0	NaN	439	2654	3092
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3096	14.345	NaN	781.11	30	0	162.25	0.106				-1	NNLQIAVGR	9	29	342.8609924316406	NaN	0	342.8609924316406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))NNLQIAVGR_	ENSG00000136531|ENST00000375437|SCN2A;ENSG00000153253|ENST00000283254|SCN3A;ENST00000480032.4_1_2:166152333-166226884:+|nuORF;nc|ENSG00000136531|Q99250-2|SCN2A;nc|ENSG00000153253|Q9NY46-2|SCN3A;nc|ENSG00000153253|Q9NY46-4|SCN3A;nc|ENSG00000153253|Q9NY46|SCN3A;SCN3A|p.M1011T|1|0.21|ENSG00000153253|chr2:165127992-165127992|A/G|missense_variant;SCN3A|p.N1922Ifs*19|1|0.09|ENSG00000153253|chr2:165090388-165090388|T/-|frameshift_variant;SCN3A|p.T1958Nfs*14|1|0.29|ENSG00000153253|chr2:165090280-165090281|-/T|frameshift_variant;SCN3A|p.T1958Qfs*16|1|0.28|ENSG00000153253|chr2:165090281-165090281|T/-|frameshift_variant	24.519189625965996	0.35377483217337163	3				NaN	NaN	0	NaN	440	2654	3092
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3097	14.347	NaN	389.32	30	0	71.956	0.037				-1	VVEFSCVFGP	10	29	570.7733154296875	NaN	0	570.7733154296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_VVEFSC(Carbamidomethyl (C))VFGP_	ENST00000435753.6_1_12:31242373-31254792:+|nuORF	23.04248740728303	0.42010282974921537	3				NaN	NaN	0	NaN	441	2654	3092
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3110	14.385	NaN	4149.2	30	0	938.26	0.147				-1	KYKKLARRAG	10	48	411.5912220046187	NaN	0	411.5907287597656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))KYKKLARRAG_	AluY_dup7324|chr1:206929266-206929570:+|9.241215358437865|0.0815861706738351|6.82|448.0|2|1|sense	28.081489160057373	0.40797012399963245	3				NaN	NaN	0	NaN	448	2660	3109
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3119	14.417	NaN	1332.7	30	0	134.85	0.145	+			6127	AVQATKNYNK	10	53	568.8068606742744	1135.5991684153487	2	568.8068237304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVQATKNYNK_	DHDDS|p.V173Wfs*31|1|0.34|ENSG00000117682|chr1:26447630-26447630|G/-|frameshift_variant;ENSG00000117682|ENST00000236342|DHDDS;nc|ENSG00000117682|Q86SQ9-2|DHDDS	80.45461616416974	0.1919067876629769	3				NaN	NaN	0	NaN	451	2666	3118
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3123	14.433	NaN	444.64	30	0	110.51	0.214			+	1695	AGTRWGHK	8	27	456.7426452636719	NaN	0	456.7426452636719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AGTRWGHK_	REV__ENSG00000111696|ENST00000392876|NT5DC3;REV__nc|ENSG00000111696|Q86UY8-2|NT5DC3	25.450171626174864	1.7418937515398478	3				NaN	NaN	0	NaN	452	2669	3122
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3124	14.437	NaN	1067	30	0	173.44	0.106	+			10510	EVVERLLSV	9	27	348.5413576726086	NaN	0	348.5417785644531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EVVERLLSV_	ENSG00000203485|ENST00000392634|INF2;INF2|p.G1056Afs*31|1|0.29|ENSG00000203485|chr14:104714323-104714323|C/-|frameshift_variant;INF2|p.G1212Dfs*19|1|0.9|ENSG00000203485|chr14:104714794-104714810|GGGGCCGGGCCTCAAAG/-|frameshift_variant;INF2|p.P438Lfs*120|1|1.0|ENSG00000203485|chr14:104707576-104707576|C/-|frameshift_variant;INF2|p.P472Qfs*86|1|0.43|ENSG00000203485|chr14:104707676-104707676|C/-|frameshift_variant;INF2|p.V530Wfs*28|3|0.32|ENSG00000203485|chr14:104707848-104707848|C/-|frameshift_variant;nc|ENSG00000203485|Q27J81-2|INF2	23.04248740728303	0.3589936788096251	3				NaN	NaN	0	NaN	453	2669	3122
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3125	14.439	NaN	1438	30	0	135.93	0.035	+			46328	VEKKKEPSV	9	46	522.3083899139018	1042.6022268946035	2	522.3088989257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VEKKKEPSV_	ENSG00000167674|ENST00000616600|HDGFL2;nc|ENSG00000167674|Q7Z4V5-2|HDGFL2;nc|ENSG00000167674|Q7Z4V5-3|HDGFL2;nc|ENSG00000167674|Q7Z4V5-4|HDGFL2	65.46538089061403	0.16805504838372562	3				NaN	NaN	0	NaN	454	2669	3122
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3130	14.453	NaN	4816	30	0	829.71	0.214	+			25327	LPDFPNHSP	9	53	512.2467186721125	1022.478884411025	2	512.2462768554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LPDFPNHSP_	ADGRB1|p.L1307P|1|0.1|ENSG00000181790|chr8:142542154-142542154|T/C|missense_variant	38.80614096846853	0.43426287593479557	3				NaN	NaN	0	NaN	456	2672	3129
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3131	14.457	NaN	2461.1	30	0	211.15	0.106	+			43017	TEKRSTVAC	9	52	497.7530777965717	993.4916026599434	2	497.752685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEKRSTVAC_	ENSG00000112799|ENST00000230568|LY86	37.81151784470057	0.4459294069877048	3				NaN	NaN	0	NaN	457	2672	3129
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3132	14.459	NaN	966.42	30	0	304.82	0.036			+	9389	EKEHPGKRI	9	40	547.3098754882812	NaN	0	547.3098754882812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EKEHPGKRI_	REV__CKAP2|p.K606Rfs*14|3|0.38|ENSG00000136108|chr13:52474899-52474899|A/-|frameshift_variant;REV__CKAP2|p.R384Gfs*6|1|0.18|ENSG00000136108|chr13:52462405-52462405|A/-|frameshift_variant;REV__CKAP2|p.T295Qfs*14|1|0.12|ENSG00000136108|chr13:52461702-52461702|A/-|frameshift_variant;REV__CKAP2|p.T579Pfs*11|1|0.07|ENSG00000136108|chr13:52474011-52474011|A/-|frameshift_variant;REV__ENSG00000136108|ENST00000258607|CKAP2;REV__nc|ENSG00000136108|Q8WWK9-4|CKAP2;REV__nc|ENSG00000136108|Q8WWK9-6|CKAP2;REV__nc|ENSG00000136108|Q8WWK9|CKAP2	34.172542307311794	0.30503706118289736	3				NaN	NaN	0	NaN	458	2672	3129
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3139	14.475	NaN	1315.9	30	0	189.23	0.214	+			16233	HEEEKRSAL	9	45	549.7815551757812	NaN	0	549.7815551757812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HEEEKRSAL_	ENSG00000197892|ENST00000524189|KIF13B;KIF13B|p.K1288Rfs*13|1|0.34|ENSG00000197892|chr8:29113530-29113530|T/-|frameshift_variant	49.536043120802724	0.20989033510253738	3				NaN	NaN	0	NaN	462	2675	3138
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3140	14.478	NaN	1845.4	30	0	1137.7	0.106			+	43527	TGTKQFQELEE	11	19	655.3164221891689	1308.6182914451376	2	655.31591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TGTKQFQELEE_	REV__ENSG00000196305|ENST00000443024|IARS1	12.811709888998246	0.8104996705804273	3				NaN	NaN	0	NaN	463	2675	3138
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3141	14.48	NaN	2816.7	30	0	412.11	0.037			+	-1	LSSVYGISCL	10	44	366.85578442341057	NaN	0	366.8561096191406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LSSVYGISC(Carbamidomethyl (C))L_	REV__ABCA9|p.F1166Lfs*5|1|0.33|ENSG00000154258|chr17:68995952-68995952|A/-|frameshift_variant;REV__ABCA9|p.P1249Qfs*18|1|0.17|ENSG00000154258|chr17:68990930-68990930|A/-|frameshift_variant;REV__ENSG00000154258|ENST00000340001|ABCA9;REV__nc|ENSG00000154258|Q8IUA7-3|ABCA9;REV__nc|ENSG00000154258|Q8IUA7-4|ABCA9	35.15202426646627	0.38475398474706135	3				NaN	NaN	0	NaN	464	2675	3138
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3150	14.5	NaN	2019.1	30	0	436.36	0.214			+	20328	KERDLSKKL	9	43	558.8413621150183	1115.6681712968366	2	558.8412475585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KERDLSKKL_	REV__ENSG00000249158|ENST00000398640|PCDHA11;REV__nc|ENSG00000249158|Q9Y5I1-2|PCDHA11	58.22992032128504	0.22837015374068087	3				NaN	NaN	0	NaN	470	2678	3149
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3151	14.504	NaN	900.65	30	0	116.02	0.106			+	48856	VVCGGGLR	8	31	380.7104187011719	NaN	0	380.7104187011719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVCGGGLR_	REV__ENST00000392779.6_1_3:160821289-160823116:-|nuORF	20.481830146152948	1.741893751539848	3				NaN	NaN	0	NaN	471	2678	3149
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3152	14.506	NaN	680.49	30	0	87.629	0.034	+			13123	GGHLHHLR	8	32	463.756824701149	925.499096469098	2	463.7559814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GGHLHHLR_	ENST00000303592.3_1_22:38823883-38851043:-|nuORF	23.036711822280957	0.7814608874307191	3				NaN	NaN	0	NaN	472	2678	3149
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3158	14.522	NaN	18118	30	0	2965.2	0.214	+			3656	ASYGVSKGK	9	68	448.7458148421121	895.4770767510242	2	448.74566650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASYGVSKGK_	ENSG00000153187|ENST00000640218|HNRNPU;nc|ENSG00000153187|Q00839-2|HNRNPU	123.20810148215591	0.019257656778428764	3				NaN	NaN	0	NaN	475	2681	3157
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3159	14.525	NaN	1146.2	30	0	409.25	0.034	+			48628	VTSKGAGLSK	10	43	474.28061397396937	946.5466750147388	2	474.2803649902344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTSKGAGLSK_	ENSG00000136068|ENST00000295956|FLNB;ENST00000481470.5_1_3:58155276-58156486:+|nuORF;ENST00000484981.1_1_3:58151207-58156486:+|nuORF;nc|ENSG00000136068|O75369-2|FLNB;nc|ENSG00000136068|O75369-3|FLNB;nc|ENSG00000136068|O75369-6|FLNB;nc|ENSG00000136068|O75369-7|FLNB;nc|ENSG00000136068|O75369-8|FLNB;nc|ENSG00000136068|O75369-9|FLNB	41.42661286455405	0.5359995577334734	3				NaN	NaN	0	NaN	476	2681	3157
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3165	14.54	NaN	7266.7	30	0	4085.7	0.214			+	7963	DSSGQKNGK	9	34	460.72482933739144	919.4351057415829	2	460.7242431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DSSGQKNGK_	REV__ENSG00000184083|ENST00000375180|FAM120C	21.9598887501803	0.5980208138527809	3				NaN	NaN	0	NaN	479	2684	3164
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3166	14.543	NaN	2083.2	30	0	380.06	0.106			+	21976	KSELAKTK	8	44	452.7771116168591	903.5396703005182	2	452.7763977050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KSELAKTK_	REV__ENST00000589950.1_1_17:43228245-43238834:-|nuORF	56.72105179125745	0.5342425954139568	3				NaN	NaN	0	NaN	480	2684	3164
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3167	14.545	NaN	1500.6	30	0	249.12	0.106	+			48272	VTDNGSPPK	9	45	457.73325955277676	913.4519661723535	2	457.73236083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTDNGSPPK_	ENSG00000083857|ENST00000441802|FAT1;FAT1|p.G2934Vfs*3|2|0.37|ENSG00000083857|chr4:186617787-186617787|T/-|frameshift_variant;FAT1|p.N3847Yfs*7|1|0.03|ENSG00000083857|chr4:186601370-186601371|-/TTATA|frameshift_variant;FAT1|p.P3228Lfs*42|1|0.27|ENSG00000083857|chr4:186611556-186611556|G/-|frameshift_variant;FAT1|p.P4313Lfs*36|1|0.34|ENSG00000083857|chr4:186596602-186596602|G/-|frameshift_variant;FAT1|p.Q2933Hfs*14|1|0.33|ENSG00000083857|chr4:186617787-186617788|-/G|frameshift_variant;FAT1|p.T1364Yfs*8|1|0.23|ENSG00000083857|chr4:186636118-186636119|-/A|frameshift_variant;FAT1|p.V1878Cfs*8|2|0.22|ENSG00000083857|chr4:186620955-186620956|-/G|frameshift_variant	76.16968421966216	0.11411088698345859	3				NaN	NaN	0	NaN	481	2684	3164
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3168	14.547	NaN	1524.5	30	0	653.39	0.106			+	25013	LLGIRDMAQ	9	36	339.5236878458478	1015.5492341377435	3	339.5238342285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LLGIRDMAQ_	REV__ENSG00000047578|ENST00000261588|KATNIP;REV__ENST00000573850.1_1_16:27709674-27761267:+|nuORF	23.04248740728303	0.5879033540491928	3				NaN	NaN	0	NaN	482	2684	3164
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3169	14.549	NaN	549.96	30	0	129.05	0.037	+			8673	EDTYTQKLSV	10	25	592.2977905273438	NaN	0	592.2977905273438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EDTYTQKLSV_	ENSG00000164889|ENST00000413384|SLC4A2;nc|ENSG00000164889|P04920-2|SLC4A2;nc|ENSG00000164889|P04920-3|SLC4A2	30.317721548370564	0.4006274431774794	3				NaN	NaN	0	NaN	483	2684	3164
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3178	14.569	NaN	4249.7	30	0	1934.4	0.214	+			46085	VCVLNSDRKA	10	43	368.86454286870764	NaN	0	368.86456298828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VCVLNSDRKA_	ENSG00000166750|ENST00000299977|SLFN5;SLFN5|p.P698Lfs*21|1|0.46|ENSG00000166750|chr17:35265300-35265300|C/-|frameshift_variant;SLFN5|p.Q524Sfs*11|1|0.73|ENSG00000166750|chr17:35264609-35264609|C/-|frameshift_variant	35.15202426646627	0.38475398474706135	3				NaN	NaN	0	NaN	489	2687	3177
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3179	14.572	NaN	2365.1	30	0	390.89	0.106	+			48789	VTYTEHAKR	9	49	552.7936488814215	1103.572744829643	2	552.7933349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTYTEHAKR_	ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2	115.49404669440601	0.023927554121326553	3				NaN	NaN	0	NaN	490	2687	3177
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3180	14.574	NaN	773.56	30	0	193.2	0.106	+			46433	VERTRREA	8	25	508.7820129394531	NaN	0	508.7820129394531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VERTRREA_	ENSG00000186001|ENST00000425562|LRCH3;ENST00000494069.1_1_3:197566242-197575018:+|nuORF;nc|ENSG00000186001|Q96II8-2|LRCH3;nc|ENSG00000186001|Q96II8-3|LRCH3;nc|ENSG00000186001|Q96II8-4|LRCH3	19.996771675451527	1.7418937515398478	3				NaN	NaN	0	NaN	491	2687	3177
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3181	14.576	NaN	624.82	30	0	137.62	0.106			+	32069	QSASMGSAPV	10	25	467.71905517578125	NaN	0	467.71905517578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QSASMGSAPV_	REV__ENST00000399767.5_1_22:18226574-18257190:-|nuORF	25.57405402267927	0.4162033004763879	3				NaN	NaN	0	NaN	492	2687	3177
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3182	14.578	NaN	805.67	30	0	88.833	0.106				-1	EEETVCLD	8	29	497.70639467841306	993.3982364236261	2	497.70538330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_EEETVC(Carbamidomethyl (C))LD_	ENSG00000096696|ENST00000379802|DSP;nc|ENSG00000096696|P15924-2|DSP;nc|ENSG00000096696|P15924-3|DSP	19.359975847455235	0.7988239741663654	3				NaN	NaN	0	NaN	493	2687	3177
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3183	14.58	NaN	2058.1	30	0	556.13	0.035			+	32528	QVRAQLLAK	9	45	513.8250330600312	1025.6355131868622	2	514.3259887695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QVRAQLLAK_	REV__ENSG00000187796|ENST00000371732|CARD9;REV__ENST00000485975.1_1_9:139264964-139265319:-|nuORF;REV__nc|ENSG00000289701|Q9H257-2|CARD9;REV__nc|ENSG00000289701|Q9H257-3|CARD9	40.77816245573522	0.41113185337114944	3				NaN	NaN	0	NaN	494	2687	3177
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3184	14.58	NaN	1882.8	30	0	528.9	0.144	+			48527	VTNPKRIAK	9	34	342.88569169986823	1025.6352456998047	3	342.8856201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VTNPKRIAK_	ENSG00000074800|ENST00000234590|ENO1;ENST00000464920.1_1_1:8921421-8930582:-|nuORF;nc|ENSG00000074800|P06733-2|ENO1	32.81241826257853	0.4965981579233955	3				NaN	NaN	0	NaN	495	2687	3177
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3190	14.596	NaN	2110.8	30	0	234.23	0.214	+			48211	VTAPPARNR	9	56	491.2836470698511	980.5527412065022	2	491.283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTAPPARNR_	ENSG00000163320|ENST00000482016|CGGBP1	90.36981228632155	0.0638227155548745	3				NaN	NaN	0	NaN	498	2690	3189
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3191	14.6	NaN	3115.2	30	0	317.5	0.034			+	47042	VLESALKR	8	57	458.28512691670466	914.5557009002093	2	458.2841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VLESALKR_	REV__tr|U7SU89|U7SU89_FUSNUD-glycero-beta-D-manno-heptose1-phosphateadenylyltransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01064PE=4SV=1	68.484700416344	0.4195245774506064	3				NaN	NaN	0	NaN	499	2690	3189
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3196	14.614	NaN	4932.3	30	0	1401.5	0.214	+			38977	SSSALHVHK	9	60	483.26228983508076	964.5100267369615	2	483.26202392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSSALHVHK_	ENSG00000173480|ENST00000312026|ZNF417;ENSG00000198466|ENST00000339656|ZNF587;nc|ENSG00000173480|Q8TAU3-2|ZNF417;nc|ENSG00000198466|Q96SQ5-2|ZNF587;ZNF417|p.R546Kfs*4|1|0.34|ENSG00000173480|chr19:57908641-57908642|-/T|frameshift_variant	117.81106730687013	0.02252488733980868	3				NaN	NaN	0	NaN	501	2693	3195
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3197	14.618	NaN	2845.6	30	0	357.64	0.106	+			38511	SSCGKFQTK	9	60	521.7528368252736	1041.491120717347	2	521.75390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SSC(Carbamidomethyl (C))GKFQTK_	DDX24|p.A177Rfs*34|1|0.2|ENSG00000089737|chr14:94079221-94079221|G/-|frameshift_variant;DDX24|p.S507Ffs*17|1|0.26|ENSG00000089737|chr14:94060491-94060492|-/A|frameshift_variant;ENSG00000089737|ENST00000621632|DDX24;ENST00000555324.1_1_14:94545323-94547480:-|nuORF;ENST00000555762.1_1_14:94524146-94547480:-|nuORF;nc|ENSG00000089737|Q9GZR7-2|DDX24	63.53385203322761	0.18415635464017938	3				NaN	NaN	0	NaN	502	2693	3195
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3198	14.62	NaN	848.96	30	0	229.38	0.031				-1	KCRKKYAL	8	24	356.2109706120203	NaN	0	356.2110900878906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_KC(Carbamidomethyl (C))RKKYAL_	ENSG00000163697|ENST00000508593|APBB2;ENST00000509475.5_1_4:40892379-41016395:-|nuORF;nc|ENSG00000163697|Q92870-2|APBB2;nc|ENSG00000163697|Q92870|APBB2	18.324413293986947	1.7418937515398478	3				NaN	NaN	0	NaN	503	2693	3195
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3204	14.635	NaN	2720.8	30	0	735.66	0.143	+			38978	SSSALHVHK	9	34	322.5104846046754	964.5096244142262	3	322.51043701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSSALHVHK_	ENSG00000173480|ENST00000312026|ZNF417;ENSG00000198466|ENST00000339656|ZNF587;nc|ENSG00000173480|Q8TAU3-2|ZNF417;nc|ENSG00000198466|Q96SQ5-2|ZNF587;ZNF417|p.R546Kfs*4|1|0.34|ENSG00000173480|chr19:57908641-57908642|-/T|frameshift_variant	39.252832667884924	0.4290233611298554	3				NaN	NaN	0	NaN	506	2696	3203
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3211	14.655	NaN	11219	30	0	2407.8	0.214	+			22798	KVFGGTVHKK	10	67	550.8328073981256	1099.6510618630512	2	550.8327026367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVFGGTVHKK_	ENSG00000163655|ENST00000496455|GMPS;GMPS|p.S473Lfs*26|1|0.37|ENSG00000163655|chr3:155922281-155922281|T/-|frameshift_variant;nc|ENSG00000163655|P49915-2|GMPS	136.48854661914896	0.011690315628778602	3				NaN	NaN	0	NaN	510	2699	3210
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3212	14.659	NaN	1220.3	30	0	139.74	0.106			+	44914	TVAGGPKKT	9	39	429.7562606609144	857.4979683886288	2	429.7557678222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVAGGPKKT_	REV__ADCY5|p.L820Tfs*74|1|0.32|ENSG00000173175|chr3:123304169-123304170|-/G|frameshift_variant;REV__ADCY5|p.N612Kfs*66|1|0.37|ENSG00000173175|chr3:123327729-123327730|-/T|frameshift_variant;REV__ENSG00000173175|ENST00000462833|ADCY5	64.20726635412375	0.17854274437659667	3				NaN	NaN	0	NaN	511	2699	3210
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3213	14.661	NaN	504.45	30	0	44.735	0.106			+	30929	QELLIRTA	8	33	472.28192138671875	NaN	0	472.28192138671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QELLIRTA_	REV__ENSG00000179630|ENST00000325686|LACC1	29.14955571784316	1.7418937515398478	3				NaN	NaN	0	NaN	512	2699	3210
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3214	14.663	NaN	226.88	30	0	88.123	0.106				-1	RCELLGAVRL	10	12	396.23016357421875	NaN	0	396.23016357421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_RC(Carbamidomethyl (C))ELLGAVRL_	tr|U7SZH4|U7SZH4_FUSNUHelicaseATP-bindingdomain-containingprotein(Fragment)OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00871PE=4SV=1;tr|U7T6K5|U7T6K5_FUSNUHelicaseC-terminaldomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00274PE=4SV=1	7.3997283801893845	0.4201028297492154	3				NaN	NaN	0	NaN	513	2699	3210
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3215	14.665	NaN	1800.5	30	0	395.33	0.106	+			31735	QPAGPGGDAD	10	36	442.6911150903353	883.3676772474706	2	442.69012451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QPAGPGGDAD_	ENSG00000196218|ENST00000359596|RYR1;nc|ENSG00000196218|P21817-2|RYR1;nc|ENSG00000196218|P21817-3|RYR1	31.529811441608018	0.6223461015008678	3				NaN	NaN	0	NaN	514	2699	3210
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3216	14.666	NaN	26708	30	0	11592	0.037	+			22799	KVFGGTVHKK	10	77	367.55765407536626	1099.6511328262989	3	367.8916320800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KVFGGTVHKK_	ENSG00000163655|ENST00000496455|GMPS;GMPS|p.S473Lfs*26|1|0.37|ENSG00000163655|chr3:155922281-155922281|T/-|frameshift_variant;nc|ENSG00000163655|P49915-2|GMPS	82.83050618871818	0.17249597090446123	3				NaN	NaN	0	NaN	515	2699	3210
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3223	14.684	NaN	3316.8	30	0	444.51	0.215			+	8496	EASWSKRR	8	60	510.2717560766902	1018.5289592201805	2	510.27191162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EASWSKRR_	REV__ENST00000551835.5_1_12:57998631-57999993:+|nuORF	60.97194046774394	0.49215940876911696	3				NaN	NaN	0	NaN	519	2702	3222
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3224	14.687	NaN	1632	30	0	417.64	0.106			+	20901	KISSIPTRL	9	52	507.81913446371334	1013.6237159942267	2	507.8189697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KISSIPTRL_	REV__ENST00000392325.8_1_17:80573596-80573788:-|nuORF	48.601550744091256	0.3193666407755445	3				NaN	NaN	0	NaN	520	2702	3222
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3225	14.689	NaN	814.66	30	0	69.94	0.106	+			18500	ISHPAVWAK	9	40	504.7861022949219	NaN	0	504.7861022949219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ISHPAVWAK_	ENST00000487062.1_1_1:38423860-38425872:-|nuORF	23.04248740728303	0.3589936788096251	3				NaN	NaN	0	NaN	521	2702	3222
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3226	14.691	NaN	914.37	30	0	104.38	0.106	+			31978	QRCELLQRA	9	40	558.8012084960938	NaN	0	558.8012084960938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QRCELLQRA_	ENSG00000119559|ENST00000585675|C19orf25;ENST00000592486.1_1_19:1475033-1475351:-|nuORF	49.44154591367651	0.21054156626303966	3				NaN	NaN	0	NaN	522	2702	3222
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3227	14.693	NaN	2050.3	30	0	352.42	0.037				-1	SSIRHMIRK	9	36	381.88534039059687	NaN	0	381.8853454589844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_SSIRHM(Oxidation (M))IRK_	ENSG00000108107|ENST00000344063|RPL28;nc|ENSG00000108107|P46779-2|RPL28;nc|ENSG00000108107|P46779-3|RPL28	30.317721548370564	0.32449924987115025	3				NaN	NaN	0	NaN	523	2702	3222
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3234	14.711	NaN	10219	30	0	3096.2	0.214	+			41026	SVHRSHPLA	9	38	335.1854330314368	NaN	0	335.185302734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVHRSHPLA_	ENST00000358377.6_2_14:73425600-73425693:+|nuORF	34.172542307311794	0.30503706118289736	3				NaN	NaN	0	NaN	527	2705	3233
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3235	14.714	NaN	1121.1	30	0	129.67	0.106	+			37994	SPKPTSGK	8	48	401.22748422149925	800.4404155097985	2	401.22698974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SPKPTSGK_	KCNN3|p.P217Rfs*67|1|0.27|ENSG00000143603|chr1:154869315-154869315|G/-|frameshift_variant	38.80614096846853	0.6637206697844082	3				NaN	NaN	0	NaN	528	2705	3233
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3236	14.716	NaN	2678.5	30	0	501.36	0.106	+			5613	AVCKAGAVEK	10	56	516.7795511754126	1031.5445494176251	2	516.7783813476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_AVC(Carbamidomethyl (C))KAGAVEK_	ENO1|p.D318Mfs*5|1|0.43|ENSG00000074800|chr1:8864006-8864006|C/-|frameshift_variant;ENSG00000074800|ENST00000234590|ENO1;ENST00000464920.1_1_1:8921421-8930582:-|nuORF;nc|ENSG00000074800|P06733-2|ENO1	83.6470233535746	0.16744595502813267	3				NaN	NaN	0	NaN	529	2705	3233
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3237	14.718	NaN	2187.8	30	0	263.68	0.106			+	33129	REPRYILL	8	52	530.3180648375613	NaN	0	530.3173828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_REPRYILL_	REV__nc|ENSG00000122224|Q9HBG7-3|LY9	38.80614096846853	1.7418937515398478	3				NaN	NaN	0	NaN	530	2705	3233
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3238	14.72	NaN	1670.7	30	0	291.15	0.106				-1	 	0	31	587.3209058428124	586.3136293762124	1	587.3199462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	531	2705	3233
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3239	14.722	NaN	506.22	30	0	66.006	0.035	+			20658	KGKRDLIVP	9	32	513.326416015625	NaN	0	513.326416015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KGKRDLIVP_	ENSG00000019485|ENST00000683152|PRDM11;nc|ENSG00000019485|Q9NQV5-2|PRDM11;nc|ENSG00000019485|Q9NQV5|PRDM11;PRDM11|p.D398Tfs*54|1|0.08|ENSG00000019485|chr11:45224560-45224560|G/-|frameshift_variant;PRDM11|p.P127Rfs*40|2|0.26|ENSG00000019485|chr11:45182910-45182910|C/-|frameshift_variant	29.170058357718403	0.3302935627494407	3				NaN	NaN	0	NaN	532	2705	3233
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3240	14.722	NaN	2935.4	30	0	534.78	0.138			+	204	AALIYLVN	8	55	438.7615511601264	875.5085493870528	2	438.7606506347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AALIYLVN_	REV__ENSG00000122733|ENST00000242315|PHF24	37.028477286268924	0.6747514403204248	3				NaN	NaN	0	NaN	533	2705	3233
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3245	14.739	NaN	1624.1	30	0	400.7	0.145	+			214	AALQVHQPPPG	11	27	372.2057189941406	NaN	0	372.2057189941406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AALQVHQPPPG_	ENST00000596769.1_1_19:53510963-53514048:+|nuORF	26.063383197487333	0.44926255568796863	3				NaN	NaN	0	NaN	535	2708	3244
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3254	14.772	NaN	1774.1	30	0	226.2	0.144	+			18779	ITQGKDAAVSK	11	59	559.3153268573055	1116.616100781411	2	559.31494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ITQGKDAAVSK_	ENSG00000140464|ENST00000268058|PML;ENST00000564725.1_1_15:74290377-74317280:+|nuORF;nc|ENSG00000140464|P29590-10|PML;nc|ENSG00000140464|P29590-11|PML;nc|ENSG00000140464|P29590-12|PML;nc|ENSG00000140464|P29590-13|PML;nc|ENSG00000140464|P29590-14|PML;nc|ENSG00000140464|P29590-2|PML;nc|ENSG00000140464|P29590-3|PML;nc|ENSG00000140464|P29590-4|PML;nc|ENSG00000140464|P29590-5|PML;nc|ENSG00000140464|P29590-8|PML;nc|ENSG00000140464|P29590-9|PML	86.18897241530135	0.11437590510873513	3				NaN	NaN	0	NaN	538	2714	3253
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3267	14.808	NaN	6232.5	30	0	1776.5	0.214	+			39995	STMRSTPSMRT	11	48	418.86891237486066	1253.584907724782	3	418.8683776855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STMRSTPSMRT_	PHF20|p.L826Cfs*62|1|0.3|ENSG00000025293|chr20:35938869-35938869|C/-|frameshift_variant	41.080066990542036	0.5431644350485484	3				NaN	NaN	0	NaN	545	2720	3266
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3268	14.811	NaN	2540.5	30	0	1162.6	0.106			+	-1	CAYRRQLG	8	28	341.8430132068388	NaN	0	341.8428649902344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_C(Carbamidomethyl (C))AYRRQLG_	REV__ENSG00000138131|ENST00000260702|LOXL4	25.450171626174864	1.7418937515398478	3				NaN	NaN	0	NaN	546	2720	3266
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3269	14.813	NaN	3813	30	0	660.69	0.106	+			4036	ATDDSKAVCR	10	70	533.2544414222257	1064.4943299112513	2	533.2546997070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATDDSKAVCR_	ENSG00000115758|ENST00000234111|ODC1	66.96192283764107	0.30252237217063654	3				NaN	NaN	0	NaN	547	2720	3266
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3270	14.815	NaN	2632.9	30	0	555.05	0.106			+	42250	TAAPVSRGR	9	56	457.7623115675065	913.510070201813	2	457.7618408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TAAPVSRGR_	REV__MARCKSL1|p.E111Gfs*87|1|0.17|ENSG00000175130|chr1:32334853-32334853|T/-|frameshift_variant	64.20726635412375	0.17854274437659667	3				NaN	NaN	0	NaN	548	2720	3266
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3271	14.817	NaN	1420.1	30	0	269.53	0.106	+			27858	MTGSSAPCK	9	47	469.70763021148707	937.4007074897742	2	469.707275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_MTGSSAPC(Carbamidomethyl (C))K_	ENST00000392001.6_1_2:238499129-238499162:-|nuORF	60.11826168202944	0.21262886028301267	3				NaN	NaN	0	NaN	549	2720	3266
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3272	14.819	NaN	2725.5	30	0	1038.9	0.036	+			22373	KTIDASVSKK	10	48	359.54864397505395	1075.6241025253619	3	359.5484619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KTIDASVSKK_	ENSG00000171681|ENST00000261168|ATF7IP;ENST00000535179.1_1_12:14619386-14628955:+|nuORF;ENST00000537653.5_1_12:14576849-14628955:+|nuORF;nc|ENSG00000171681|Q6VMQ6-2|ATF7IP;nc|ENSG00000171681|Q6VMQ6-4|ATF7IP;nc|ENSG00000171681|Q6VMQ6-5|ATF7IP	63.42647028704847	0.33467688528802414	3				NaN	NaN	0	NaN	550	2720	3266
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3273	14.819	NaN	2702.2	30	0	612.25	0.141				-1	LCWMLCSH	8	58	553.7343511724356	1105.454149411671	2	554.2362060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C)	_LC(Carbamidomethyl (C))WMLC(Carbamidomethyl (C))SH_	ENST00000265970.11_1_11:17124313-17124355:-|nuORF	31.57888975003103	0.7155046476286219	3				NaN	NaN	0	NaN	551	2720	3266
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3280	14.837	NaN	17545	30	0	2504.4	0.214	+			19282	KAFQATQQK	9	85	525.2909150125517	1048.5672770919034	2	525.2913818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAFQATQQK_	ENSG00000145391|ENST00000274031|SETD7	190.2614974402762	0.00026591377982909756	3				NaN	NaN	0	NaN	555	2723	3279
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3281	14.841	NaN	2024.4	30	0	592.95	0.106	+			22374	KTIDASVSKK	10	54	538.8200073242188	NaN	0	538.8200073242188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTIDASVSKK_	ENSG00000171681|ENST00000261168|ATF7IP;ENST00000535179.1_1_12:14619386-14628955:+|nuORF;ENST00000537653.5_1_12:14576849-14628955:+|nuORF;nc|ENSG00000171681|Q6VMQ6-2|ATF7IP;nc|ENSG00000171681|Q6VMQ6-4|ATF7IP;nc|ENSG00000171681|Q6VMQ6-5|ATF7IP	68.78561909154949	0.16253348330109996	3				NaN	NaN	0	NaN	556	2723	3279
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3282	14.843	NaN	5795.2	30	0	668.8	0.106	+			43006	TEKQKESTL	9	70	532.2856823196655	1062.556811706131	2	532.285400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TEKQKESTL_	ENSG00000153046|ENST00000397588|CDYL;nc|ENSG00000153046|Q9Y232|CDYL	150.36159442982594	0.006784847064083231	3				NaN	NaN	0	NaN	557	2723	3279
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3283	14.845	NaN	1408.6	30	0	168.03	0.106	+			12888	GESADAVKKA	10	53	488.2600337680605	974.505514602921	2	488.2586364746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GESADAVKKA_	ENSG00000114416|ENST00000357559|FXR1;ENST00000473375.1_1_3:180669142-180671642:+|nuORF;FXR1|p.N300Mfs*8|1|0.11|ENSG00000114416|chr3:180957832-180957832|A/-|frameshift_variant;FXR1|p.T526Sfs*13|1|0.07|ENSG00000114416|chr3:180970330-180970331|-/TCTGTATTATC|frameshift_variant;nc|ENSG00000114416|P51114-2|FXR1;nc|ENSG00000114416|P51114-3|FXR1	96.0336014099291	0.09653029772959643	3				NaN	NaN	0	NaN	558	2723	3279
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3284	14.846	NaN	1973.4	30	0	389	0.106	+			48510	VTNDKLTSK	9	50	503.2832332354705	1004.551913537741	2	503.2823181152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTNDKLTSK_	ENSG00000135899|ENST00000258381|SP110;ENST00000486146.2_1_2:231068050-231077551:-|nuORF;nc|ENSG00000135899|Q9HB58-3|SP110;nc|ENSG00000135899|Q9HB58-5|SP110;nc|ENSG00000135899|Q9HB58-7|SP110;nc|ENSG00000135899|Q9HB58|SP110	80.45461616416974	0.09558281504443908	3				NaN	NaN	0	NaN	559	2723	3279
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3285	14.848	NaN	731.63	30	0	248.17	0.106			+	-1	LMSRNPGSN	9	26	496.2333984375	NaN	0	496.2333984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_LM(Oxidation (M))SRNPGSN_	REV__ENST00000435964.1_1_2:175260618-175260879:+|nuORF	26.69291269510374	0.34280015626154364	3				NaN	NaN	0	NaN	560	2723	3279
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3286	14.85	NaN	3707.7	30	0	637.37	0.037				-1	SRSITCFVR	9	46	375.8644653957193	NaN	0	375.8648376464844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_SRSITC(Carbamidomethyl (C))FVR_	ENSG00000267060|ENST00000591916|PTGES3L;nc|ENSG00000266967|Q9BTE6-2|AARSD1;nc|ENSG00000266967|Q9BTE6-3|AARSD1;nc|ENSG00000267060|E9PB15-2|PTGES3L	28.081489160057373	0.33578952234132536	3				NaN	NaN	0	NaN	561	2723	3279
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3293	14.866	NaN	2031	30	0	732.6	0.214	+			3987	ATAVAGAVAGA	11	43	429.7380422754322	857.4615316176644	2	429.73760986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATAVAGAVAGA_	CCDC112|p.E223Sfs*20|2|0.29|ENSG00000164221|chr5:115275219-115275219|T/-|frameshift_variant;CCDC112|p.R236Gfs*7|1|0.32|ENSG00000164221|chr5:115271590-115271590|T/-|frameshift_variant;ENSG00000164221|ENST00000379611|CCDC112;ENST00000503027.1_1_5:114615459-114632276:-|nuORF	58.78195531508484	0.3343278462358323	3				NaN	NaN	0	NaN	565	2726	3292
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3294	14.87	NaN	2119	30	0	1012.9	0.106	+			32037	QRRDFAVVK	9	39	559.8259285371345	1117.6373041410689	2	559.8258056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QRRDFAVVK_	ENSG00000188452|ENST00000410087|CERKL;ENST00000421817.5_1_2:182412449-182414421:-|nuORF;nc|ENSG00000188452|Q49MI3-3|CERKL;nc|ENSG00000188452|Q49MI3-4|CERKL;nc|ENSG00000188452|Q49MI3-5|CERKL;nc|ENSG00000188452|Q49MI3-9|CERKL;nc|ENSG00000188452|Q49MI3|CERKL	17.468008924990375	0.6112419832031292	3				NaN	NaN	0	NaN	566	2726	3292
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3295	14.872	NaN	476.63	30	0	69.498	0.106				-1	SSNSMQTIQK	10	37	570.2714233398438	NaN	0	570.2714233398438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_SSNSM(Oxidation (M))QTIQK_	ENSG00000111057|ENST00000388835|KRT18;ENST00000446618.1_1_22:19245879-19246326:+|nuORF;ENST00000447938.1_1_21:21797263-21797497:-|nuORF;ENST00000506277.1_1_5:36886275-36886596:+|nuORF	27.047317107675042	0.41136583337917604	3				NaN	NaN	0	NaN	567	2726	3292
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3296	14.874	NaN	2841.7	30	0	672.65	0.106	+			4946	ATQRQIVFR	9	35	373.5520935058594	NaN	0	373.5520935058594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATQRQIVFR_	sp|P09717|US16_HCMVAUncharacterizedproteinHVLF2OS=Humancytomegalovirus(strainAD169)OX=10360GN=US16PE=3SV=2;sp|Q6SVZ0|US16_HCMVMProteinUS16OS=Humancytomegalovirus(strainMerlin)OX=295027GN=US16PE=3SV=1	20.94693142431847	0.3660861156085067	3				NaN	NaN	0	NaN	568	2726	3292
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3297	14.876	NaN	478.23	30	0	106.21	0.036			+	8032	DTTKMHVIE	9	21	537.269775390625	NaN	0	537.269775390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DTTKMHVIE_	REV__ENST00000553731.1_1_14:51102099-51132046:-|nuORF;REV__ENST00000555720.5_1_14:51111705-51132064:-|nuORF	15.641811463095205	0.38404136392510424	3				NaN	NaN	0	NaN	569	2726	3292
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3303	14.892	NaN	5349.5	30	0	901.32	0.214				-1	 	0	77	574.3018254378625	573.2945489712624	1	574.302490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	572	2729	3302
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3304	14.896	NaN	1900.1	30	0	400.74	0.106	+			5659	AVDPSSGHPR	10	50	511.7546473871473	1021.4947418410947	2	511.75518798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVDPSSGHPR_	ENSG00000164323|ENST00000458385|CFAP97	61.691277971877994	0.35045824941635534	3				NaN	NaN	0	NaN	573	2729	3302
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3305	14.898	NaN	1182.2	30	0	229.11	0.106	+			44465	TSPTKESK	8	27	439.23509920497025	NaN	0	439.235107421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TSPTKESK_	ENSG00000145362|ENST00000357077|ANK2	42.396135135203025	1.7418937515398478	3				NaN	NaN	0	NaN	574	2729	3302
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3306	14.9	NaN	701.17	30	0	145.3	0.106	+			9108	EGKSILLFG	9	38	482.27764892578125	NaN	0	482.27764892578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EGKSILLFG_	ENSG00000099968|ENST00000317582|BCL2L13;ENST00000485631.1_1_22:18189492-18210297:+|nuORF;nc|ENSG00000099968|Q9BXK5-4|BCL2L13	44.116797842482775	0.2472372736944149	3				NaN	NaN	0	NaN	575	2729	3302
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3307	14.902	NaN	2493.7	30	0	1130.9	0.035	+			15510	GVCGKGFKK	9	39	327.51645319335563	979.5275301802669	3	327.51629638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_GVC(Carbamidomethyl (C))GKGFKK_	ENSG00000167625|ENST00000301215|ZNF526	71.87747018426188	0.13267044672804276	3				NaN	NaN	0	NaN	576	2729	3302
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3312	14.916	NaN	10805	30	0	2038.1	0.215				-1	 	0	71	492.7721048289503	983.5296567247007	2	492.7719421386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	578	2732	3311
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3313	14.92	NaN	1387.2	30	0	604.33	0.106	+			7821	DPSSGHPR	8	27	426.70185986108817	851.3891667889764	2	426.70166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DPSSGHPR_	ENSG00000164323|ENST00000458385|CFAP97	44.116797842482775	0.6307669463330267	3				NaN	NaN	0	NaN	579	2732	3311
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3314	14.922	NaN	861.93	30	0	259.79	0.035			+	16705	HLAEALIPQ	9	32	496.2828341389553	NaN	0	496.28326416015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HLAEALIPQ_	REV__CAND2|p.V955Wfs*12|1|0.3|ENSG00000144712|chr3:12817790-12817790|G/-|frameshift_variant;REV__ENSG00000144712|ENST00000456430|CAND2;REV__nc|ENSG00000144712|O75155-2|CAND2	30.503639358989545	0.3235605894931338	3				NaN	NaN	0	NaN	580	2732	3311
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3321	14.938	NaN	2638.1	30	0	304.52	0.144	+			43119	TEREQKNSL	9	62	552.7860114952371	1103.557470057274	2	552.7858276367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEREQKNSL_	BICD2|p.R258C|1|0.42|ENSG00000185963|chr9:92720590-92720590|G/A|missense_variant;ENSG00000185963|ENST00000356884|BICD2;nc|ENSG00000185963|Q8TD16|BICD2	78.26377905018397	0.10505600812668463	3				NaN	NaN	0	NaN	584	2735	3320
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3330	14.962	NaN	2239	30	0	290.82	0.214			+	30978	QEQVKKLK	8	48	500.8114926237399	999.6084323142799	2	500.81121826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QEQVKKLK_	REV__ENSG00000204991|ENST00000378247|SPIRE2;REV__ENST00000561883.1_1_16:89920747-89922226:+|nuORF;REV__ENST00000569108.5_1_16:89916567-89936677:+|nuORF;REV__nc|ENSG00000204991|Q8WWL2-2|SPIRE2;REV__nc|ENSG00000204991|Q8WWL2-3|SPIRE2;REV__nc|ENSG00000204991|Q8WWL2-4|SPIRE2	44.377184641726394	0.6291511924298419	3				NaN	NaN	0	NaN	590	2738	3329
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3331	14.966	NaN	2786.6	30	0	1012.7	0.106	+			32376	QVALTRHK	8	40	476.7885490621024	951.5625451910048	2	476.788330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QVALTRHK_	ENSG00000131018|ENST00000367255|SYNE1;ENST00000461872.6_1_6:152697909-152949466:-|nuORF;nc|ENSG00000131018|Q8NF91-10|SYNE1;nc|ENSG00000131018|Q8NF91-4|SYNE1;nc|ENSG00000131018|Q8NF91-7|SYNE1;SYNE1|p.A1810T|1|0.19|ENSG00000131018|chr6:152417009-152417009|C/T|missense_variant;SYNE1|p.A3854Lfs*20|1|0.4|ENSG00000131018|chr6:152352048-152352048|T/-|frameshift_variant;SYNE1|p.E4738Kfs*25|1|0.12|ENSG00000131018|chr6:152330474-152330474|T/-|frameshift_variant;SYNE1|p.E5862Gfs*83|1|0.12|ENSG00000131018|chr6:152300729-152300738|CCAGACTCCT/-|frameshift_variant;SYNE1|p.G6773Wfs*7|1|0.44|ENSG00000131018|chr6:152236186-152236187|-/A|frameshift_variant;SYNE1|p.I2756*|1|0.12|ENSG00000131018|chr6:152387293-152387293|T/-|frameshift_variant;SYNE1|p.K3606Sfs*5|1|0.25|ENSG00000131018|chr6:152354768-152354768|T/-|frameshift_variant;SYNE1|p.K6871Rfs*22|2|0.52|ENSG00000131018|chr6:152233881-152233881|T/-|frameshift_variant;SYNE1|p.L8283Pfs*8|1|0.19|ENSG00000131018|chr6:152148173-152148174|-/G|frameshift_variant;SYNE1|p.M2832Nfs*53|1|0.25|ENSG00000131018|chr6:152385831-152385832|-/T|frameshift_variant;SYNE1|p.M5602Nfs*13|2|0.32|ENSG00000131018|chr6:152310779-152310780|-/T|frameshift_variant;SYNE1|p.N2333Kfs*2|1|0.32|ENSG00000131018|chr6:152401168-152401169|-/T|frameshift_variant;SYNE1|p.S2126Pfs*10|1|0.33|ENSG00000131018|chr6:152409564-152409564|A/-|frameshift_variant;SYNE1|p.V8635Sfs*12|1|0.15|ENSG00000131018|chr6:152133375-152133375|T/-|frameshift_variant	49.44154591367651	0.597725784090933	3				NaN	NaN	0	NaN	591	2738	3329
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3332	14.968	NaN	2765.6	30	0	311.39	0.042			+	-1	VEECVEEYKRN	11	59	485.55896669321146	1453.6550706798344	3	485.8922424316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_VEEC(Carbamidomethyl (C))VEEYKRN_	REV__ENSG00000137831|ENST00000322954|UACA;REV__nc|ENSG00000137831|Q9BZF9-2|UACA	17.833141474888023	0.7869876583333034	3				NaN	NaN	0	NaN	592	2738	3329
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3338	14.984	NaN	2150.4	30	0	301.67	0.215	+			34995	SAATHLTSK	9	54	458.2479092927874	NaN	0	458.2479248046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAATHLTSK_	APPL1|p.L65Kfs*4|1|0.39|ENSG00000157500|chr3:57237529-57237530|TT/-|frameshift_variant;APPL1|p.R154Efs*6|1|0.31|ENSG00000157500|chr3:57242893-57242893|A/-|frameshift_variant;ENSG00000157500|ENST00000288266|APPL1;ENST00000482800.5_1_3:57261911-57301862:+|nuORF	117.81106730687013	0.0026430897281881707	3				NaN	NaN	0	NaN	595	2741	3337
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3339	14.987	NaN	1240.5	30	0	211.25	0.106	+			44892	TTWKKYGLA	9	24	356.5332946777344	NaN	0	356.5332946777344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTWKKYGLA_	KDM1B|p.I116Yfs*48|1|0.14|ENSG00000165097|chr6:18166301-18166301|A/-|frameshift_variant	34.172542307311794	0.30503706118289736	3				NaN	NaN	0	NaN	596	2741	3337
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3340	14.989	NaN	1115.1	30	0	199.54	0.106	+			39213	STAEESSPPK	10	49	516.7461715714521	1031.4777902097042	2	516.74560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STAEESSPPK_	ENSG00000181555|ENST00000409792|SETD2;nc|ENSG00000181555|Q9BYW2-2|SETD2;nc|ENSG00000181555|Q9BYW2-3|SETD2;SETD2|p.N1396Mfs*16|1|0.42|ENSG00000181555|chr3:47120449-47120449|T/-|frameshift_variant;SETD2|p.R1407Gfs*5|1|0.18|ENSG00000181555|chr3:47120417-47120417|T/-|frameshift_variant;SETD2|p.T1652Yfs*14|1|0.26|ENSG00000181555|chr3:47101519-47101520|-/A|frameshift_variant;SETD2|p.T305Qfs*35|2|0.24|ENSG00000181555|chr3:47123723-47123723|T/-|frameshift_variant	54.722347961057174	0.4138398245444204	3				NaN	NaN	0	NaN	597	2741	3337
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3341	14.991	NaN	1976.8	30	0	481.24	0.038			+	31108	QFRRRSARL	9	46	595.3551057818339	1188.6956586304677	2	595.354248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QFRRRSARL_	REV__ENSG00000123485|ENST00000411486|HJURP;REV__ENST00000454020.1_3_2:234756047-234763110:-|nuORF;REV__nc|ENSG00000123485|Q8NCD3-2|HJURP;REV__nc|ENSG00000123485|Q8NCD3-3|HJURP	28.081489160057373	0.5408112046645406	3				NaN	NaN	0	NaN	598	2741	3337
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3348	15.008	NaN	1728.1	30	0	272.19	0.143			+	21646	KPTTRMNK	8	49	496.27185265595114	990.5291523787023	2	496.2715148925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_KPTTRM(Oxidation (M))NK_	REV__ENSG00000164743|ENST00000297324|C8orf48	71.29570347882199	0.39610197767395533	3				NaN	NaN	0	NaN	602	2744	3347
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3359	15.045	NaN	1089.5	30	0	89.057	0.144	+			5645	AVDDKQLRK	9	42	536.8104641957199	1071.6063754582397	2	536.8096923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVDDKQLRK_	ENSG00000106344|ENST00000223073|RBM28;nc|ENSG00000106344|Q9NW13-2|RBM28;RBM28|p.K496R|1|0.23|ENSG00000106344|chr7:128321342-128321342|T/C|missense_variant;RBM28|p.M599*|2|0.24|ENSG00000106344|chr7:128315014-128315014|T/-|frameshift_variant	54.776311868738084	0.25715957988447635	3				NaN	NaN	0	NaN	607	2750	3358
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3365	15.062	NaN	3461.6	30	0	484.05	0.214	+			42957	TEKAKEERL	9	61	552.3072122864476	1102.599871639695	2	552.306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEKAKEERL_	ENSG00000149503|ENST00000394818|INCENP;INCENP|p.E620D|1|0.06|ENSG00000149503|chr11:62145652-62145652|G/T|missense_variant;nc|ENSG00000149503|Q9NQS7-2|INCENP	83.6470233535746	0.08277643980271215	3				NaN	NaN	0	NaN	610	2753	3364
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3366	15.065	NaN	1555.6	30	0	282.64	0.106	+			30864	QEIKGVQQR	9	50	543.3075125767944	1084.6004722203886	2	543.8104858398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QEIKGVQQR_	ENSG00000132153|ENST00000445061|DHX30;nc|ENSG00000132153|Q7L2E3-2|DHX30;nc|ENSG00000132153|Q7L2E3-3|DHX30	44.116797842482775	0.37197099687881774	3				NaN	NaN	0	NaN	611	2753	3364
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3367	15.067	NaN	924.22	30	0	90.909	0.038	+			34450	RTYDGDGYKK	10	35	601.7939453125	NaN	0	601.7939453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RTYDGDGYKK_	ENSG00000272325|ENST00000607016|NUDT3;NUDT3|p.T76Hfs*5|1|0.07|ENSG00000272325|chr6:34295674-34295674|T/-|frameshift_variant	50.033510581677724	0.305390621352984	3				NaN	NaN	0	NaN	612	2753	3364
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3373	15.084	NaN	7595.2	30	0	1815	0.215	+			39758	STITKIHSK	9	70	507.80112877131967	1013.5877046094394	2	507.8011779785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STITKIHSK_	ENSG00000138593|ENST00000559471|SECISBP2L;nc|ENSG00000138593|Q93073-2|SECISBP2L	140.11223852658463	0.010427410095706195	3				NaN	NaN	0	NaN	615	2756	3372
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3374	15.087	NaN	6118.3	30	0	994.73	0.106	+			42958	TEKAKEERL	9	62	368.54040483492423	1102.5993851049727	3	368.54022216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEKAKEERL_	ENSG00000149503|ENST00000394818|INCENP;INCENP|p.E620D|1|0.06|ENSG00000149503|chr11:62145652-62145652|G/T|missense_variant;nc|ENSG00000149503|Q9NQS7-2|INCENP	28.081489160057373	0.5408112046645406	3				NaN	NaN	0	NaN	616	2756	3372
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3375	15.089	NaN	9724.7	30	0	2973.8	0.106			+	6224	AVRGSELGLL	10	51	338.8697084349022	1013.5872959049066	3	338.86944580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVRGSELGLL_	REV__ENSG00000128833|ENST00000261839|MYO5C;REV__ENST00000558902.5_1_15:52548900-52571163:-|nuORF;REV__ENST00000560809.5_1_15:52548900-52557395:-|nuORF;REV__MYO5C|p.E1050Sfs*8|1|0.32|ENSG00000128833|chr15:52229192-52229192|C/-|frameshift_variant;REV__MYO5C|p.I480Nfs*10|1|0.5|ENSG00000128833|chr15:52253414-52253415|-/T|frameshift_variant;REV__MYO5C|p.L1151Wfs*19|1|0.17|ENSG00000128833|chr15:52223719-52223719|A/-|frameshift_variant;REV__MYO5C|p.L933Hfs*33|1|0.04|ENSG00000128833|chr15:52237552-52237553|-/T|frameshift_variant;REV__MYO5C|p.L933Sfs*35|1|0.04|ENSG00000128833|chr15:52237553-52237554|-/AAGTGGA|frameshift_variant;REV__nc|ENSG00000128833|Q9NQX4-2|MYO5C	30.503639358989545	0.6307262373768582	3				NaN	NaN	0	NaN	617	2756	3372
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3376	15.091	NaN	1006.5	30	0	157.98	0.106	+			48212	VTAPPARNR	9	43	491.2836470698511	980.5527412065022	2	491.28277587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTAPPARNR_	ENSG00000163320|ENST00000482016|CGGBP1	51.33545320467046	0.2872990594074956	3				NaN	NaN	0	NaN	618	2756	3372
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3377	15.093	NaN	3558.7	30	0	1151.5	0.034	+			50753	YEKKAAKL	8	53	475.78785210361104	949.5611512740221	2	475.7863464355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YEKKAAKL_	ENSG00000189403|ENST00000341423|HMGB1;nc|ENSG00000067066|P23497|SP100	51.19269402634007	0.5868595481438337	3				NaN	NaN	0	NaN	619	2756	3372
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3382	15.107	NaN	6054.6	30	0	1226.1	0.214	+			3650	ASYGSTTTK	9	53	458.22473503580545	914.4349171384109	2	458.224365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASYGSTTTK_	ENSG00000092108|ENST00000458591|SCFD1;ENST00000555259.5_1_14:31112578-31185169:+|nuORF;nc|ENSG00000092108|Q8WVM8-2|SCFD1;nc|ENSG00000092108|Q8WVM8-3|SCFD1	78.26377905018397	0.10505600812668463	3				NaN	NaN	0	NaN	621	2759	3381
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3383	15.111	NaN	1296.4	30	0	212.23	0.033	+			48207	VTAPGGHPR	9	38	446.24362994078564	NaN	0	446.2439270019531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTAPGGHPR_	ENSG00000204469|ENST00000376033|PRRC2A;nc|ENSG00000204469|P48634-2|PRRC2A;nc|ENSG00000204469|P48634-3|PRRC2A;nc|ENSG00000204469|P48634-4|PRRC2A;PRRC2A|p.A1596Gfs*24|1|0.1|ENSG00000204469|chr6:31634300-31634301|-/G|frameshift_variant;PRRC2A|p.G1731Wfs*35|1|0.59|ENSG00000204469|chr6:31635155-31635156|-/C|frameshift_variant;PRRC2A|p.G1884Afs*12|1|0.18|ENSG00000204469|chr6:31636228-31636228|C/-|frameshift_variant;PRRC2A|p.K1685Rfs*9|1|0.21|ENSG00000204469|chr6:31634864-31634864|C/-|frameshift_variant	56.72105179125745	0.16330365735109603	3				NaN	NaN	0	NaN	622	2759	3381
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3388	15.126	NaN	12422	30	0	1229.6	0.214				-1	 	0	75	500.79345388535484	999.5723548375097	2	500.7930908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	624	2762	3387
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3389	15.129	NaN	769.2	30	0	190.31	0.036	+			25172	LLWCLVLIQ	9	35	550.8328004572912	NaN	0	550.8327026367188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LLWCLVLIQ_	sp|F5H9I4|US13_HCMVMMembraneproteinUS13OS=Humancytomegalovirus(strainMerlin)OX=295027GN=US13PE=3SV=1;sp|P09720|US13_HCMVAUncharacterizedproteinHVLF5OS=Humancytomegalovirus(strainAD169)OX=10360GN=US13PE=3SV=1	19.996771675451527	0.3693019437812985	3				NaN	NaN	0	NaN	625	2762	3387
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3397	15.148	NaN	3657.3	30	0	564.66	0.214	+			39559	STGGRTTITTK	11	69	561.8096960145915	1121.604839095983	2	561.8103637695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STGGRTTITTK_	ENSG00000124429|ENST00000262753|POF1B;nc|ENSG00000124429|Q8WVV4-1|POF1B	102.0615471778698	0.05642515548841253	3				NaN	NaN	0	NaN	630	2765	3396
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3398	15.151	NaN	5074.9	30	0	1612.3	0.037			+	27311	MGVLSSLMRP	10	35	364.1964274198124	1089.5674528596371	3	364.1961975097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MGVLSSLMRP_	REV__ENSG00000196184|ENST00000423932|OR10J1;REV__nc|ENSG00000196184|P30954|OR10J1	24.20275056022122	0.6821818413321409	3				NaN	NaN	0	NaN	631	2765	3396
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3406	15.172	NaN	2039.5	30	0	520.98	0.143	+			7947	DSLQRIGTK	9	60	509.28861101882865	1016.5626691044573	2	509.2884216308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DSLQRIGTK_	ENSG00000075539|ENST00000358350|FRYL;nc|ENSG00000075539|O94915-2|FRYL	81.52500206392136	0.09095445986635249	3				NaN	NaN	0	NaN	636	2768	3405
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3413	15.191	NaN	2606.1	30	0	219.03	0.214	+			9880	EQKAPATEAG	10	62	501.24900392196724	1000.4834549107345	2	501.248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EQKAPATEAG_	CON__ENSEMBL:ENSBTAP00000016285	76.16968421966216	0.22691431239609447	3				NaN	NaN	0	NaN	640	2771	3412
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3414	15.194	NaN	2333.7	30	0	466.03	0.106	+			3390	ASQEGTIQK	9	54	481.2516181789322	960.4886834246644	2	481.2510070800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASQEGTIQK_	ENSG00000172349|ENST00000683961|IL16;nc|ENSG00000172349|Q14005-2|IL16;nc|ENSG00000172349|Q14005-3|IL16;nc|ENSG00000172349|Q14005-4|IL16	106.88024417677582	0.032181361622142884	3				NaN	NaN	0	NaN	641	2771	3412
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3415	15.196	NaN	5481.3	30	0	1191.7	0.106	+			35443	SASGPRHL	8	47	412.7223703894656	NaN	0	412.72235107421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SASGPRHL_	ENST00000413628.5_1_1:68568378-68586877:+|nuORF	50.0245360154114	1.7418937515398478	3				NaN	NaN	0	NaN	642	2771	3412
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3416	15.198	NaN	3568.4	30	0	1781.7	0.039	+			16382	HENEYVHGNVT	11	41	649.7905530915348	1297.5665532498695	2	650.2921142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HENEYVHGNVT_	ENSG00000105053|ENST00000316763|VRK3;ENST00000594090.5_1_19:50491627-50519408:-|nuORF;ENST00000600284.5_1_19:50490096-50500767:-|nuORF;nc|ENSG00000105053|Q8IV63-2|VRK3;nc|ENSG00000105053|Q8IV63-3|VRK3	35.15202426646627	0.6210751305041943	3				NaN	NaN	0	NaN	643	2771	3412
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3421	15.213	NaN	3425.6	30	0	1145.2	0.214	+			17970	IGWVYGSN	8	41	448.2176170967298	894.4206812602596	2	448.2170715332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IGWVYGSN_	ENSG00000132164|ENST00000254488|SLC6A11	24.20275056022122	0.7724576178584145	3				NaN	NaN	0	NaN	645	2774	3420
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3422	15.216	NaN	2495.2	30	0	317.92	0.106			+	18819	ITVSPYLKA	9	59	496.2935637896412	990.5725746460824	2	496.29339599609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ITVSPYLKA_	REV__tr|U7T6X0|U7T6X0_FUSNUNodTfamilyeffluxtransporter,outermembranefactor(OMF)lipoproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00036PE=3SV=1	68.78682469695295	0.14603441672067394	3				NaN	NaN	0	NaN	646	2774	3420
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3423	15.218	NaN	2550.6	30	0	468.48	0.106	+			44590	TTCSKVFKK	9	62	549.80362436971	1097.5926958062198	2	549.8031005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_TTC(Carbamidomethyl (C))SKVFKK_	ENSG00000167625|ENST00000301215|ZNF526	87.69643885390035	0.07135982304947239	3				NaN	NaN	0	NaN	647	2774	3420
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3424	15.22	NaN	2541	30	0	426	0.106	+			14906	GTLTPARQK	9	49	486.28547350952795	970.5563940858559	2	486.2850646972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTLTPARQK_	ENSG00000100417|ENST00000216259|PMM1;ENST00000478337.1_1_22:41980122-41985809:-|nuORF;ENST00000485648.5_1_22:41980283-41985809:-|nuORF;PMM1|p.E103Sfs*6|1|0.05|ENSG00000100417|chr22:41584348-41584348|C/-|frameshift_variant	64.20726635412375	0.17854274437659667	3				NaN	NaN	0	NaN	648	2774	3420
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3425	15.222	NaN	5799.2	30	0	659.09	0.106	+			22143	KSQQALVQK	9	74	515.3065131195295	1028.598473305859	2	515.3071899414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KSQQALVQK_	ENSG00000116459|ENST00000369722|ATP5PB;ENST00000567372.1_1_18:65945123-65945423:-|nuORF	90.60085204095205	0.06317133949006545	3				NaN	NaN	0	NaN	649	2774	3420
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3426	15.224	NaN	3067.7	30	0	476.87	0.106	+			15557	GVFKETKQK	9	58	532.8092986391374	1063.6040443450747	2	532.8104248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GVFKETKQK_	ENSG00000119927|ENST00000348367|GPAM	109.47833844074708	0.029530294723441826	3				NaN	NaN	0	NaN	650	2774	3420
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3427	15.225	NaN	3309.6	30	0	893.48	0.037			+	-1	IACPIIGLNQ	10	44	366.87047513202634	NaN	0	366.8703918457031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_IAC(Carbamidomethyl (C))PIIGLNQ_	REV__ENSG00000162849|ENST00000407071|KIF26B;REV__KIF26B|p.A1835Pfs*41|1|0.22|ENSG00000162849|chr1:245688480-245688480|G/-|frameshift_variant;REV__KIF26B|p.G746Efs*98|1|0.05|ENSG00000162849|chr1:245646258-245646259|-/AGAT|frameshift_variant;REV__KIF26B|p.R1067Gfs*65|1|0.27|ENSG00000162849|chr1:245686177-245686177|C/-|frameshift_variant;REV__nc|ENSG00000162849|Q2KJY2-2|KIF26B	28.081489160057373	0.40797012399963245	3				NaN	NaN	0	NaN	651	2774	3420
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3441	15.256	NaN	144770	30	0	17055	0.175	+			22759	KVENQQKK	8	97	501.29105915318456	1000.5675653731691	2	501.29071044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVENQQKK_	ENSG00000196670|ENST00000502412|ZFP62;nc|ENSG00000278970|Q8NB50-2|ZFP62;nc|ENSG00000278970|Q8NB50-3|ZFP62	93.19546047674547	0.2677966331495483	3				NaN	NaN	0	NaN	662	2777	3440
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3442	15.259	NaN	9328.9	30	0	4667.1	0.106				-1	 	0	50	413.22743224409686	824.4403115549937	2	413.22625732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	663	2777	3440
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3443	15.26	NaN	18806	30	0	10403	0.106	+			5221	ATTTTVTTK	9	54	462.25578767480226	922.4970224164045	2	462.2554931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATTTTVTTK_	ENSG00000163349|ENST00000426820|HIPK1;HIPK1|p.N462*|1|0.27|ENSG00000163349|chr1:113955620-113955621|-/T|frameshift_variant;nc|ENSG00000163349|Q86Z02-2|HIPK1	109.47833844074708	0.029530294723441826	3				NaN	NaN	0	NaN	664	2777	3440
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3444	15.262	NaN	4007.4	30	0	2014.9	0.106			+	34113	RSRPSHQR	8	50	512.2816461025291	1022.5487392718582	2	512.2815551757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RSRPSHQR_	REV__SCAF4|p.R471Q|1|0.17|ENSG00000156304|chr21:31693395-31693395|C/T|missense_variant	25.450171626174864	0.7628259754767981	3				NaN	NaN	0	NaN	665	2777	3440
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3445	15.264	NaN	4194.6	30	0	313.02	0.106			+	-1	ERASNGRMY	9	58	550.2512677575756	1098.4879825819512	2	550.2515258789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_ERASNGRM(Oxidation (M))Y_	REV__ENSG00000177383|ENST00000317897|MAGEF1	37.81151784470057	0.4459294069877048	3				NaN	NaN	0	NaN	666	2777	3440
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3446	15.266	NaN	1060.2	30	0	143.38	0.106			+	32651	RAAGEPNGA	9	40	421.709937310283	841.405321687366	2	421.7093811035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RAAGEPNGA_	REV__ENSG00000204315|ENST00000375156|FKBPL;REV__FKBPL|p.R222Q|1|0.07|ENSG00000204315|chr6:32129116-32129116|C/T|missense_variant	47.657333605630114	0.33044192980041115	3				NaN	NaN	0	NaN	667	2777	3440
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3447	15.268	NaN	1213.7	30	0	136.74	0.036	+			15558	GVFKETKQK	9	42	355.5413297311831	NaN	0	355.5414123535156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GVFKETKQK_	ENSG00000119927|ENST00000348367|GPAM	45.9519527083369	0.2345902329052062	3				NaN	NaN	0	NaN	668	2777	3440
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3458	15.294	NaN	12885	30	0	1795.6	0.214	+			40495	STYGVTKGK	9	64	470.75889449391667	939.5032360546334	2	470.7582702636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STYGVTKGK_	ENSG00000214753|ENST00000301785|HNRNPUL2	123.20810148215591	0.019257656778428764	3				NaN	NaN	0	NaN	676	2780	3457
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3459	15.297	NaN	2415.2	30	0	377.93	0.106	+			34099	RSQKPVMVK	9	57	536.8190883109739	1071.6236236887478	2	536.8189086914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RSQKPVMVK_	ENSG00000108107|ENST00000344063|RPL28;ENST00000412461.2_1_22:19043875-19044022:+|nuORF;ENST00000560583.5_1_19:55899571-55899697:+|nuORF	78.26377905018397	0.10505600812668463	3				NaN	NaN	0	NaN	677	2780	3457
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3460	15.299	NaN	5613.8	30	0	785.77	0.106	+			34100	RSQKPVMVK	9	63	358.2149185699253	1071.622926309976	3	358.21478271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RSQKPVMVK_	ENSG00000108107|ENST00000344063|RPL28;ENST00000412461.2_1_22:19043875-19044022:+|nuORF;ENST00000560583.5_1_19:55899571-55899697:+|nuORF	58.2462437865262	0.22823408064396822	3				NaN	NaN	0	NaN	678	2780	3457
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3461	15.301	NaN	2046.6	30	0	414.22	0.106			+	30010	PPLAAGGA	8	30	327.18467678833474	652.3548006434695	2	327.1842956542969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PPLAAGGA_	REV__ENSG00000126461|ENST00000360565|SCAF1;REV__SCAF1|p.T1181Pfs*28|8|0.37|ENSG00000126461|chr19:49654785-49654785|C/-|frameshift_variant	24.504012794735996	0.7701314986472447	3				NaN	NaN	0	NaN	679	2780	3457
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3462	15.303	NaN	1846.3	30	0	744.88	0.106	+			21833	KRGGSLPV	8	36	407.2510085758594	812.4874642185188	2	407.2505187988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KRGGSLPV_	ENSG00000142798|ENST00000374695|HSPG2;ENST00000493940.2_1_1:22177888-22181121:-|nuORF;HSPG2|p.A2287V|1|0.21|ENSG00000142798|chr1:21852098-21852098|G/A|missense_variant;HSPG2|p.C2696Sfs*49|1|0.18|ENSG00000142798|chr1:21847425-21847431|GCCCGGC/-|frameshift_variant;HSPG2|p.P3071Hfs*100|1|0.06|ENSG00000142798|chr1:21841639-21841655|GATGATGGAGCCATTGG/-|frameshift_variant;HSPG2|p.P3112Lfs*13|1|0.47|ENSG00000142798|chr1:21841279-21841279|G/-|frameshift_variant	29.14955571784316	0.7342621283720113	3				NaN	NaN	0	NaN	680	2780	3457
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3463	15.305	NaN	691.89	30	0	120.82	0.035	+			8654	EDNQKYVP	8	33	496.7365418177131	991.4585307022262	2	496.7360534667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EDNQKYVP_	tr|U7SSH0|U7SSH0_FUSNUDNAtopoisomeraseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01631PE=3SV=1	24.20275056022122	0.7724576178584145	3				NaN	NaN	0	NaN	681	2780	3457
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3464	15.305	NaN	1002.9	30	0	248.95	0.143	+			14567	GTFNPEKGKQK	11	44	617.333087810044	1232.651622686888	2	617.834228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GTFNPEKGKQK_	ENSG00000066933|ENST00000356056|MYO9A;nc|ENSG00000066933|B2RTY4-2|MYO9A;nc|ENSG00000066933|B2RTY4-4|MYO9A;nc|ENSG00000066933|B2RTY4-5|MYO9A	32.75053402867276	0.6462648045997152	3				NaN	NaN	0	NaN	682	2780	3457
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3473	15.329	NaN	10444	30	0	2396	0.214	+			5265	ATVDKTVCK	9	74	511.27120002213496	1020.52784711107	2	511.2709045410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_ATVDKTVC(Carbamidomethyl (C))K_	ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1670Tfs*23|1|0.29|ENSG00000174231|chr17:1659487-1659487|C/-|frameshift_variant	190.2614974402762	0.00026591377982909756	3				NaN	NaN	0	NaN	688	2783	3472
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3474	15.333	NaN	5944.3	30	0	1237.7	0.106	+			2921	ASCNQTLSK	9	65	504.74269697713737	1007.4708410210748	2	504.7425842285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_ASC(Carbamidomethyl (C))NQTLSK_	ENSG00000155256|ENST00000684270|ZFYVE27;ENST00000477521.5_1_10:99516996-99519054:+|nuORF;nc|ENSG00000155256|Q5T4F4-2|ZFYVE27;nc|ENSG00000155256|Q5T4F4-3|ZFYVE27;nc|ENSG00000155256|Q5T4F4-5|ZFYVE27;nc|ENSG00000155256|Q5T4F4-6|ZFYVE27;nc|ENSG00000155256|Q5T4F4-7|ZFYVE27;nc|ENSG00000155256|Q5T4F4-8|ZFYVE27	145.46060221211434	0.007927189773590037	3				NaN	NaN	0	NaN	689	2783	3472
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3475	15.335	NaN	2479.4	30	0	352.03	0.106	+			31455	QKTDTKGKK	9	57	517.304148416207	1032.593743899214	2	517.3040161132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QKTDTKGKK_	ENSG00000249156|ENST00000503184|TAF11L12;ENSG00000283740|ENST00000510838|TAF11L11	47.657333605630114	0.33044192980041115	3				NaN	NaN	0	NaN	690	2783	3472
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3476	15.336	NaN	822.52	30	0	164.83	0.106			+	34303	RTLRHRHSH	9	33	600.3361385189748	NaN	0	600.336181640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RTLRHRHSH_	REV__ENST00000264560.11_1_19:747626-748151:+|nuORF	52.936696900407355	0.1864545979552969	3				NaN	NaN	0	NaN	691	2783	3472
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3477	15.338	NaN	990.31	30	0	249.12	0.106			+	-1	CMVKWGPK	8	26	341.16973876953125	NaN	0	341.16973876953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C),Oxidation (M)	_C(Carbamidomethyl (C))M(Oxidation (M))VKWGPK_	REV__ENST00000545049.1_1_12:2977686-2983239:-|nuORF	17.364965105453717	1.7418937515398478	3				NaN	NaN	0	NaN	692	2783	3472
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3478	15.34	NaN	1221.7	30	0	199.79	0.036			+	21046	KKKRKCRK	8	46	537.8579711914062	NaN	0	537.8579711914062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KKKRKCRK_	REV__BTC|p.R149C|1|0.28|ENSG00000174808|chr4:74748133-74748133|G/A|missense_variant	33.51558372728122	1.7418937515398478	3				NaN	NaN	0	NaN	693	2783	3472
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3479	15.341	NaN	309.37	30	0	32.444	0.141	+			7767	DPAKCRYALG	10	28	547.27734375	NaN	0	547.27734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DPAKCRYALG_	DDR1|p.G583Afs*70|1|0.31|ENSG00000204580|chr6:30896740-30896740|G/-|frameshift_variant;DDR1|p.M37I|1|0.29|ENSG00000204580|chr6:30888933-30888933|G/A|missense_variant;DDR1|p.P483Rfs*170|1|0.29|ENSG00000204580|chr6:30894602-30894602|C/-|frameshift_variant;DDR1|p.P593Qfs*60|1|0.38|ENSG00000204580|chr6:30896770-30896770|C/-|frameshift_variant;ENSG00000204580|ENST00000376568|DDR1;ENST00000431373.1_1_6:30853540-30859007:+|nuORF;ENST00000504152.5_1_6:30856506-30856812:+|nuORF;nc|ENSG00000204580|Q08345-2|DDR1;nc|ENSG00000204580|Q08345-4|DDR1;nc|ENSG00000204580|Q08345-5|DDR1;nc|ENSG00000204580|Q08345-6|DDR1	21.9598887501803	0.4201028297492154	3				NaN	NaN	0	NaN	694	2783	3472
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3486	15.359	NaN	4003.7	30	0	1166.8	0.214	+			38586	SSFYNTKKK	9	61	551.7984017940496	1101.582250654899	2	551.7984619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSFYNTKKK_	ENSG00000169692|ENST00000371696|AGPAT2;ENST00000472820.1_1_9:139568206-139571631:-|nuORF;nc|ENSG00000169692|O15120-2|AGPAT2	109.47833844074708	0.029530294723441826	3				NaN	NaN	0	NaN	698	2786	3485
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3487	15.362	NaN	3696	30	0	564.34	0.106	+			40887	SVFKSARQK	9	56	525.8064319854602	1049.5983110377204	2	525.8060913085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVFKSARQK_	ENSG00000080503|ENST00000349721|SMARCA2;nc|ENSG00000080503|P51531-2|SMARCA2	49.536043120802724	0.308405419312776	3				NaN	NaN	0	NaN	699	2786	3485
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3488	15.364	NaN	3042.2	30	0	991.02	0.106			+	401	AASSSKIES	9	38	440.2246828017227	878.4348126702454	2	440.22430419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AASSSKIES_	REV__ENSG00000108395|ENST00000262294|TRIM37;REV__nc|ENSG00000108395|O94972-2|TRIM37;REV__nc|ENSG00000108395|O94972-3|TRIM37;REV__TRIM37|p.P935Rfs*15|1|0.29|ENSG00000108395|chr17:59001606-59001606|G/-|frameshift_variant	45.97224482568171	0.3502073465782774	3				NaN	NaN	0	NaN	700	2786	3485
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3489	15.366	NaN	1040.7	30	0	224.61	0.106	+			19827	KEDREKEQL	9	44	587.8072079826012	NaN	0	587.8069458007812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEDREKEQL_	ENSG00000178913|ENST00000313368|TAF7	50.033510581677724	0.206462018841031	3				NaN	NaN	0	NaN	701	2786	3485
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3490	15.368	NaN	912.65	30	0	142.96	0.106	+			47691	VSEGGGLQGV	10	34	451.7327498054511	901.4509466777022	2	451.7322998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSEGGGLQGV_	CADPS2|p.I1285V|1|0.27|ENSG00000081803|chr7:122320203-122320203|T/C|missense_variant	40.77816245573522	0.5419747034533848	3				NaN	NaN	0	NaN	702	2786	3485
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3491	15.37	NaN	3953.4	30	0	940.39	0.039				-1	GNKMDKMSEQL	11	71	656.7976469128624	1311.5807408925248	2	657.298583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Oxidation (M)	_GNKM(Oxidation (M))DKM(Oxidation (M))SEQL_	MMRN1|p.D629G|1|0.09|ENSG00000138722|chr4:89935566-89935566|A/G|missense_variant	33.921630207806714	0.6339809607503234	3				NaN	NaN	0	NaN	703	2786	3485
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3496	15.384	NaN	1972.3	30	0	277.31	0.215	+			35111	SAGHGLPAK	9	47	419.2328848967145	836.451216860229	2	419.232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAGHGLPAK_	ENSG00000113648|ENST00000511689|MACROH2A1;ENST00000511494.5_1_5:134670668-134681802:-|nuORF;ENST00000512507.5_1_5:134670668-134688768:-|nuORF;nc|ENSG00000113648|O75367-3|MACROH2A1;nc|ENSG00000113648|O75367|MACROH2A1	74.25504064058377	0.12238981753128622	3				NaN	NaN	0	NaN	705	2789	3495
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3497	15.387	NaN	6697.7	30	0	1847	0.106	+			41601	SVQHVDAAEK	10	43	361.85269617197906	1082.5362591161372	3	361.8524475097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVQHVDAAEK_	ENST00000585682.5_1_4:159092526-159092595:-|nuORF	29.550750289552195	0.6385079145554603	3				NaN	NaN	0	NaN	706	2789	3495
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3498	15.389	NaN	3773.7	30	0	668.47	0.106	+			41602	SVQHVDAAEK	10	61	542.2752671735642	1082.5359814139283	2	542.275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVQHVDAAEK_	ENST00000585682.5_1_4:159092526-159092595:-|nuORF	133.7523857240709	0.012419833933541829	3				NaN	NaN	0	NaN	707	2789	3495
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3499	15.391	NaN	908.92	30	0	94.505	0.106			+	40052	STNLKESVV	9	39	488.7693930859729	975.5242332387459	2	488.7693786621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STNLKESVV_	REV__tr|U7T2W4|U7T2W4_FUSNUBiopolymertransporterExbDOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00483PE=3SV=1	42.396135135203025	0.392153681582562	3				NaN	NaN	0	NaN	708	2789	3495
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3500	15.393	NaN	538.59	30	0	78.407	0.034				-1	YLVCHGIP	8	24	479.7425537109375	NaN	0	479.7425537109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_YLVC(Carbamidomethyl (C))HGIP_	ENSG00000138801|ENST00000265174|PAPSS1	16.704963439144045	1.7418937515398478	3				NaN	NaN	0	NaN	709	2789	3495
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3506	15.409	NaN	1880.7	30	0	235.29	0.214	+			6091	AVNKQLADK	9	61	493.78503882159475	985.5555247099895	2	493.7848205566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVNKQLADK_	ENSG00000166595|ENST00000422424|CIAO2B;ENST00000562362.5_1_16:66966108-66968009:-|nuORF	85.86182877749512	0.07653218437724067	3				NaN	NaN	0	NaN	712	2792	3505
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3507	15.412	NaN	2170.4	30	0	290.67	0.106			+	28668	NLSGGLMSCGL	11	54	534.2472254991235	1066.4798980650469	2	534.24755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_NLSGGLM(Oxidation (M))SCGL_	REV__ENSG00000145491|ENST00000274134|ROPN1L;REV__ENST00000510520.5_1_5:10442060-10472024:+|nuORF;REV__ENST00000515762.5_1_5:10442078-10461472:+|nuORF	51.19269402634007	0.4047928213175833	3				NaN	NaN	0	NaN	713	2792	3505
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3508	15.414	NaN	1629	30	0	715.9	0.106			+	21350	KLYVNDIQ	8	31	496.7726133984818	991.5306738637636	2	496.7721862792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KLYVNDIQ_	REV__tr|U7T272|U7T272_FUSNUHemolysinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00572PE=4SV=1	51.33545320467046	0.5859736979383976	3				NaN	NaN	0	NaN	714	2792	3505
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3509	15.416	NaN	867.74	30	0	132.37	0.035	+			14174	GSQAGGSQTLK	11	46	517.2673331019735	NaN	0	517.26806640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GSQAGGSQTLK_	ENSG00000125354|ENST00000394610|SEPTIN6;ENST00000467310.1_1_X:118753883-118767379:-|nuORF;ENST00000481072.1_1_X:118763279-118767388:-|nuORF;nc|ENSG00000125354|Q14141-4|SEPTIN6;nc|ENSG00000125354|Q14141|SEPTIN6	35.495647763667336	0.40722694788826996	3				NaN	NaN	0	NaN	715	2792	3505
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3520	15.44	NaN	9205.4	30	0	2130.1	0.214	+			6236	AVSEGTKAVTK	11	75	545.8088810113876	1089.603209089575	2	545.8099365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVSEGTKAVTK_	ENSG00000124635|ENST00000339812|H2BC11;ENSG00000146047|ENST00000274764|H2BC1;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000196890|ENST00000693095|H2BC26;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000369385.5_1_1:149814898-149814982:+|nuORF;ENST00000436555.1_1_1:228651916-228652012:-|nuORF;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;nc|ENSG00000203814|Q5QNW6-2|H2BC18;nc|ENSG00000285480|A0A2R8Y619|H2BK1	128.3478880297481	0.0041339947484058445	3				NaN	NaN	0	NaN	723	2795	3519
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3521	15.443	NaN	1671.4	30	0	147.8	0.106	+			32845	RCQQPIGTK	9	59	515.7771971744105	1029.539841415621	2	515.7777099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RCQQPIGTK_	ENSG00000115641|ENST00000530340|FHL2	56.72105179125745	0.24094814563026265	3				NaN	NaN	0	NaN	724	2795	3519
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3522	15.445	NaN	611.3	30	0	232.74	0.106	+			50598	YDLCSVVV	8	33	449.2247314453125	NaN	0	449.2247314453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YDLCSVVV_	ENSG00000118369|ENST00000529308|USP35;nc|ENSG00000118369|Q9P2H5-2|USP35	21.70233525837049	1.7418937515398478	3				NaN	NaN	0	NaN	725	2795	3519
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3523	15.447	NaN	743.61	30	0	99.363	0.038	+			39993	STMPHTSGMNR	11	39	617.769093044659	NaN	0	617.76904296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_STMPHTSGM(Oxidation (M))NR_	ENSG00000150907|ENST00000379561|FOXO1	48.601550744091256	0.32536291591840966	3				NaN	NaN	0	NaN	726	2795	3519
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3531	15.465	NaN	68215	30	0	47629	0.214	+			6237	AVSEGTKAVTK	11	64	364.20848556982617	1089.6036273096786	3	364.2080993652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVSEGTKAVTK_	ENSG00000124635|ENST00000339812|H2BC11;ENSG00000146047|ENST00000274764|H2BC1;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000196890|ENST00000693095|H2BC26;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000369385.5_1_1:149814898-149814982:+|nuORF;ENST00000436555.1_1_1:228651916-228652012:-|nuORF;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;nc|ENSG00000203814|Q5QNW6-2|H2BC18;nc|ENSG00000285480|A0A2R8Y619|H2BK1	56.632244143249146	0.3535169766007185	3				NaN	NaN	0	NaN	731	2798	3530
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3532	15.469	NaN	4573.8	30	0	1018.8	0.106	+			5642	AVDATLRKK	9	60	501.30910625263294	1000.6036595720659	2	501.3087463378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVDATLRKK_	ENSG00000131043|ENST00000320849|AAR2	112.10723106719422	0.02684780151337622	3				NaN	NaN	0	NaN	732	2798	3530
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3533	15.471	NaN	7866.5	30	0	1050.6	0.106	+			35971	SEGTKAVTK	9	77	460.7561319196334	919.4977109060668	2	460.75567626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEGTKAVTK_	ENSG00000124635|ENST00000339812|H2BC11;ENSG00000146047|ENST00000274764|H2BC1;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000196890|ENST00000693095|H2BC26;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000369385.5_1_1:149814898-149814982:+|nuORF;ENST00000436555.1_1_1:228651916-228652012:-|nuORF;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;HIST1H2BD|p.Y122H|1|0.36|ENSG00000158373|chr6:26158533-26158533|T/C|missense_variant;nc|ENSG00000203814|Q5QNW6-2|H2BC18;nc|ENSG00000285480|A0A2R8Y619|H2BK1	191.44940797552337	0.00014666235100428603	3				NaN	NaN	0	NaN	733	2798	3530
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3534	15.473	NaN	4457.7	30	0	2481.3	0.106			+	45863	VALVGTSARK	10	32	334.5418463272134	1000.6037095818403	3	334.5415954589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VALVGTSARK_	REV__ENST00000438934.5_2_22:18958062-18975611:+|nuORF;REV__ENST00000440005.6_2_22:18958062-18978324:+|nuORF	23.52269567125451	0.6877354443478558	3				NaN	NaN	0	NaN	734	2798	3530
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3535	15.474	NaN	693.65	30	0	81.855	0.106	+			39216	STAERGMVK	9	39	489.7548644429288	NaN	0	489.7549743652344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STAERGMVK_	ENSG00000130396|ENST00000683244|AFDN;nc|ENSG00000130396|P55196-1|AFDN;nc|ENSG00000130396|P55196-2|AFDN;nc|ENSG00000130396|P55196-3|AFDN;nc|ENSG00000130396|P55196-5|AFDN;nc|ENSG00000130396|P55196-6|AFDN;nc|ENSG00000130396|P55196|AFDN	49.44154591367651	0.21054156626303966	3				NaN	NaN	0	NaN	735	2798	3530
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3536	15.476	NaN	610.59	30	0	167.32	0.032	+			1117	AELLYIIRQK	10	28	416.2560729980469	NaN	0	416.2560729980469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AELLYIIRQK_	CASP10|p.F397Hfs*7|1|0.3|ENSG00000003400|chr2:201209333-201209334|TT/-|frameshift_variant;CASP10|p.K392Nfs*26|1|0.1|ENSG00000003400|chr2:201209319-201209319|A/-|frameshift_variant;ENSG00000003400|ENST00000286186|CASP10;ENST00000460140.5_1_2:202050494-202070750:+|nuORF;ENST00000484926.1_1_2:202050494-202050848:+|nuORF;nc|ENSG00000003400|Q92851-2|CASP10;nc|ENSG00000003400|Q92851-3|CASP10;nc|ENSG00000003400|Q92851-5|CASP10;nc|ENSG00000003400|Q92851-6|CASP10;nc|ENSG00000003400|Q92851-7|CASP10;nc|ENSG00000003400|Q92851|CASP10	16.71738777980365	0.4201028297492154	3				NaN	NaN	0	NaN	736	2798	3530
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3537	15.477	NaN	855.81	30	0	309.24	0.14	+			30631	QASRRKHK	8	46	505.8031311035156	NaN	0	505.8031311035156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QASRRKHK_	ENST00000560184.5_1_15:90408823-90437190:-|nuORF;ENST00000560224.1_1_15:90408823-90446582:-|nuORF	44.116797842482775	1.7418937515398478	3				NaN	NaN	0	NaN	737	2798	3530
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3549	15.504	NaN	34389	30	0	8060.4	0.211	+			51086	YLRACQQDRC	10	91	685.3090193282193	1368.6034857232385	2	685.3079223632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_YLRAC(Carbamidomethyl (C))QQDRC(Carbamidomethyl (C))_	ENSG00000198788|ENST00000675028|MUC2;nc|ENSG00000198788|Q02817|MUC2	54.776311868738084	0.41334902933431344	3				NaN	NaN	0	NaN	746	2801	3548
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3550	15.507	NaN	1209.9	30	0	331.13	0.106	+			8092	DWQFYLTY	8	43	568.2605268122217	NaN	0	568.2606201171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DWQFYLTY_	ENSG00000111300|ENST00000261745|NAA25;ENST00000549711.5_1_12:112487373-112518932:-|nuORF;ENST00000552527.5_1_12:112478245-112546577:-|nuORF;NAA25|p.D271N|1|0.36|ENSG00000111300|chr12:112074730-112074730|C/T|missense_variant;NAA25|p.E958Sfs*3|1|0.51|ENSG00000111300|chr12:112029578-112029578|C/-|frameshift_variant;NAA25|p.V720Gfs*6|1|0.14|ENSG00000111300|chr12:112043716-112043717|-/C|frameshift_variant;nc|ENSG00000111300|Q14CX7-2|NAA25	29.14955571784316	1.7418937515398478	3				NaN	NaN	0	NaN	747	2801	3548
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3551	15.509	NaN	1730.8	30	0	1199.9	0.106	+			47525	VQPRGMWL	8	34	493.76431238302825	985.5140718328565	2	493.7632141113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VQPRGMWL_	ENST00000471077.2_1_7:129845089-129845215:-|nuORF	28.2542754592877	0.7411748056684583	3				NaN	NaN	0	NaN	748	2801	3548
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3552	15.511	NaN	836.65	30	0	258.99	0.106				-1	FAFCCASGRL	10	33	594.7684936523438	NaN	0	594.7684936523438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_FAFC(Carbamidomethyl (C))C(Carbamidomethyl (C))ASGRL_	ENSG00000177082|ENST00000434634|WDR73;ENST00000558608.1_1_15:85186703-85189170:-|nuORF;ENST00000559015.5_1_15:85186703-85191289:-|nuORF;ENST00000559126.5_1_15:85186703-85196938:-|nuORF;ENST00000560966.5_1_15:85188615-85189170:-|nuORF	21.9598887501803	0.4201028297492154	3				NaN	NaN	0	NaN	749	2801	3548
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3553	15.513	NaN	512.04	30	0	47.972	0.106			+	20993	KKGIDLIR	8	37	471.8086242675781	NaN	0	471.8086242675781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KKGIDLIR_	REV__ENSG00000141384|ENST00000269142|TAF4B;REV__ENST00000504528.2_1_4:113747859-113748312:+|nuORF	45.9519527083369	1.7418937515398478	3				NaN	NaN	0	NaN	750	2801	3548
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3554	15.515	NaN	1682	30	0	289.71	0.04				-1	ATREDLRCRSG	11	51	440.8867380012581	1319.6383846039744	3	440.8861389160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_ATREDLRC(Carbamidomethyl (C))RSG_	ENST00000551964.5_2_12:99038968-99039502:+|nuORF	22.561587123415745	0.7531385481947795	3				NaN	NaN	0	NaN	751	2801	3548
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3555	15.515	NaN	1362.7	30	0	261.38	0.141	+			33023	REIKKVNVS	9	50	536.8271484375	NaN	0	536.8271484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_REIKKVNVS_	ENSG00000036549|ENST00000370801|ZZZ3;ENST00000476275.5_1_1:78046613-78098535:-|nuORF;nc|ENSG00000036549|Q8IYH5-2|ZZZ3;nc|ENSG00000036549|Q8IYH5-4|ZZZ3;ZZZ3|p.N537Ifs*57|1|0.16|ENSG00000036549|chr1:77584551-77584551|T/-|frameshift_variant	32.75053402867276	0.3122164853807509	3				NaN	NaN	0	NaN	752	2801	3548
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3568	15.544	NaN	6547.1	30	0	1134.3	0.214	+			10137	ESQSGYVWN	9	59	535.2319583753233	1068.4493638174465	2	535.2314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ESQSGYVWN_	ENSG00000182405|ENST00000397766|PGBD4;PGBD4|p.A291V|1|0.37|ENSG00000182405|chr15:34103403-34103403|C/T|missense_variant	64.20726635412375	0.17854274437659667	3				NaN	NaN	0	NaN	762	2804	3567
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3569	15.548	NaN	8429.9	30	0	3103	0.106	+			5301	ATVKLEHAK	9	61	498.795978437533	995.577403941866	2	498.7955017089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATVKLEHAK_	ENSG00000118705|ENST00000237530|RPN2;nc|ENSG00000118705|P04844-2|RPN2	112.10723106719422	0.02684780151337622	3				NaN	NaN	0	NaN	763	2804	3567
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3570	15.55	NaN	4944.9	30	0	706.66	0.106	+			13740	GQCGNQIGAK	10	62	516.748491833269	1031.4824307333379	2	516.7488403320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_GQC(Carbamidomethyl (C))GNQIGAK_	CON__ENSEMBL:ENSBTAP00000025008;ENSG00000101162|ENST00000217133|TUBB1;ENSG00000104833|ENST00000264071|TUBB4A;ENSG00000137267|ENST00000333628|TUBB2A;ENSG00000137285|ENST00000259818|TUBB2B;ENSG00000173213|ENST00000308911|TUBB8B;ENSG00000188229|ENST00000340384|TUBB4B;ENSG00000196230|ENST00000327892|TUBB;ENSG00000258947|ENST00000315491|TUBB3;ENSG00000261456|ENST00000568584|TUBB8;ENST00000489942.1_1_6:3155224-3157697:-|nuORF;ENST00000554116.5_1_16:89989809-89998148:+|nuORF;ENST00000554927.1_1_16:89989809-89999206:+|nuORF;ENST00000604929.1_1_9:140135770-140136775:+|nuORF;TUBB|p.G142Afs*23|1|0.35|ENSG00000196230|chr6:30723483-30723483|G/-|frameshift_variant;TUBB2B|p.D177Hfs*21|1|0.32|ENSG00000137285|chr6:3225559-3225560|TC/-|frameshift_variant;TUBB4A|p.G141Vfs*24|2|0.35|ENSG00000104833|chr19:6496077-6496077|C/-|frameshift_variant	118.74307786436346	0.029104951601466193	3				NaN	NaN	0	NaN	764	2804	3567
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3571	15.552	NaN	3287	30	0	905.22	0.106	+			29503	PDIEFAKK	8	50	474.2622085809884	946.5098642287768	2	474.2611083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PDIEFAKK_	ENSG00000183091|ENST00000397345|NEB;nc|ENSG00000183091|P20929-1|NEB;nc|ENSG00000183091|P20929-3|NEB;nc|ENSG00000183091|P20929-4|NEB;NEB|p.K715Nfs*8|1|0.06|ENSG00000183091|chr2:151691930-151691930|T/-|frameshift_variant;NEB|p.L4198Cfs*51|1|0.35|ENSG00000183091|chr2:151568357-151568357|G/-|frameshift_variant;NEB|p.N3442Tfs*4|1|0.2|ENSG00000183091|chr2:151618297-151618297|T/-|frameshift_variant;NEB|p.P541Lfs*16|1|0.49|ENSG00000183091|chr2:151695630-151695630|G/-|frameshift_variant;NEB|p.P928Lfs*29|1|0.38|ENSG00000183091|chr2:151684830-151684830|G/-|frameshift_variant	58.78195531508484	0.5138399468736706	3				NaN	NaN	0	NaN	765	2804	3567
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3572	15.554	NaN	414.66	30	0	37.117	0.106	+			40157	STQQEKETIAK	11	33	631.833193015412	NaN	0	631.8328247070312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STQQEKETIAK_	ENSG00000116459|ENST00000369722|ATP5PB	22.781379530053464	0.456735970842152	3				NaN	NaN	0	NaN	766	2804	3567
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3573	15.555	NaN	543.44	30	0	62.507	0.034	+			15354	GTVSATSPNK	10	36	481.2509460449219	NaN	0	481.2509460449219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTVSATSPNK_	ENSG00000105856|ENST00000222574|HBP1;nc|ENSG00000105856|O60381-2|HBP1;nc|ENSG00000105856|O60381-3|HBP1	42.33807565288922	0.3540422799631949	3				NaN	NaN	0	NaN	767	2804	3567
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3580	15.572	NaN	1296.3	30	0	295.01	0.214	+			14512	GTDEHVVCK	9	51	522.7426502742429	NaN	0	522.7424926757812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GTDEHVVC(Carbamidomethyl (C))K_	nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM	85.16082228582465	0.053699699744190164	3				NaN	NaN	0	NaN	771	2807	3579
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3581	15.575	NaN	1490.9	30	0	458.18	0.106	+			32103	QSGTALFR	8	34	440.23816128946373	878.4617696457275	2	440.2372741699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QSGTALFR_	ENSG00000172824|ENST00000648724|CES4A;ENST00000535543.5_1_16:67034893-67043042:+|nuORF;ENST00000543561.1_1_16:67034544-67038818:+|nuORF;nc|ENSG00000172824|Q5XG92-2|CES4A;nc|ENSG00000172824|Q5XG92-4|CES4A;nc|ENSG00000172824|Q5XG92-5|CES4A;nc|ENSG00000172824|Q5XG92-6|CES4A;nc|ENSG00000172824|Q5XG92-7|CES4A;nc|ENSG00000172824|Q5XG92-8|CES4A	27.882242232435846	0.7440473649773525	3				NaN	NaN	0	NaN	772	2807	3579
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3582	15.577	NaN	506.58	30	0	143.82	0.037			+	8817	EELGPCGAVCR	11	27	567.2567749023438	NaN	0	567.2567749023438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EELGPCGAVCR_	REV__ENST00000472011.5_1_1:235582749-235612074:+|nuORF;REV__nc|ENSG00000285053|Q15813-2|TBCE;REV__nc|ENSG00000285053|Q15813|TBCE	31.529811441608018	0.4249010005043958	3				NaN	NaN	0	NaN	773	2807	3579
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3587	15.591	NaN	6509.8	30	0	2370.7	0.214			+	8639	EDIQTLAQIST	11	66	406.87897376203136	NaN	0	406.8792419433594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EDIQTLAQIST_	REV__CKAP5|p.V1971Lfs*42|1|0.03|ENSG00000175216|chr11:46744211-46744212|-/TTGAAAAAAAG|frameshift_variant;REV__ENSG00000175216|ENST00000529230|CKAP5;REV__nc|ENSG00000175216|Q14008-3|CKAP5	42.33807565288922	0.3703495330385095	3				NaN	NaN	0	NaN	775	2810	3586
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3588	15.595	NaN	1657.5	30	0	470.73	0.106	+			39235	STAKHVFEK	9	57	523.7852865022219	1045.5560200712437	2	523.78515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STAKHVFEK_	ENSG00000184445|ENST00000333479|KNTC1;ENST00000436959.7_1_12:123087118-123101977:+|nuORF;KNTC1|p.K1646Nfs*2|2|0.35|ENSG00000184445|chr12:122603073-122603073|A/-|frameshift_variant;KNTC1|p.K1646Tfs*12|1|0.13|ENSG00000184445|chr12:122603073-122603074|AA/-|frameshift_variant;KNTC1|p.L1647Tfs*12|1|0.3|ENSG00000184445|chr12:122603072-122603073|-/A|frameshift_variant;nc|ENSG00000184445|P50748-2|KNTC1	90.60085204095205	0.06317133949006545	3				NaN	NaN	0	NaN	776	2810	3586
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3589	15.597	NaN	3316.6	30	0	2161.1	0.106	+			41108	SVIQEIHQE	9	34	361.5208274157322	1081.5406528473966	3	361.5208435058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVIQEIHQE_	ENSG00000203942|ENST00000370640|C10orf62	25.57405402267927	0.5642445186134241	3				NaN	NaN	0	NaN	777	2810	3586
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3590	15.599	NaN	650.43	30	0	179.17	0.034			+	26635	LVCDPHSAK	9	34	485.2449919629004	NaN	0	485.24505615234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LVCDPHSAK_	REV__ENSG00000183655|ENST00000337975|KLHL25;REV__KLHL25|p.E514Gfs*5|1|0.18|ENSG00000183655|chr15:85768252-85768270|CGCGTCCACTGGTTGGTCT/-|frameshift_variant	30.503639358989545	0.3235605894931338	3				NaN	NaN	0	NaN	778	2810	3586
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3596	15.615	NaN	6288	30	0	4128.5	0.214				-1	 	0	40	413.22743224409686	824.4403115549937	2	413.22723388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	781	2813	3595
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3597	15.619	NaN	2952.6	30	0	296.63	0.106			+	6873	CLHCKHPK	8	60	483.2444714860927	964.4743900389855	2	483.24383544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_CLHCKHPK_	REV__ENST00000467811.5_1_20:50704880-50715019:-|nuORF;REV__nc|ENSG00000020256|Q9NTW7-2|ZFP64;REV__nc|ENSG00000020256|Q9NTW7-3|ZFP64;REV__nc|ENSG00000020256|Q9NTW7|ZFP64	62.97842346883844	0.4722955155785405	3				NaN	NaN	0	NaN	782	2813	3595
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3598	15.621	NaN	3962.1	30	0	1449.8	0.106			+	14836	GTLLLSIIYI	10	43	369.2328060330506	NaN	0	369.23309326171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTLLLSIIYI_	REV__ENST00000602886.1_1_15:31218770-31219034:+|nuORF	28.081489160057373	0.40797012399963245	3				NaN	NaN	0	NaN	783	2813	3595
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3599	15.622	NaN	1429.1	30	0	337.41	0.106	+			22557	KTSGSNVKIVK	11	40	580.8546142578125	NaN	0	580.8546142578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTSGSNVKIVK_	ENSG00000124172|ENST00000243997|ATP5F1E	58.2462437865262	0.24969438890455364	3				NaN	NaN	0	NaN	784	2813	3595
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3600	15.624	NaN	1086.9	30	0	229.46	0.035				-1	KKFRCSGN	8	41	498.75610330927236	995.4976536853447	2	498.7565002441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_KKFRC(Carbamidomethyl (C))SGN_	ENST00000518140.5_1_5:168199753-168727722:-|nuORF	31.954861631926434	0.7126016770032289	3				NaN	NaN	0	NaN	785	2813	3595
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3606	15.639	NaN	4976.5	30	0	1078.2	0.214	+			33879	RRPAHSGPAD	10	61	532.2737614962532	1062.5329700593063	2	532.2737426757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RRPAHSGPAD_	ENST00000458001.2_1_13:114537591-114537669:+|nuORF	84.9155231211612	0.16018353804806162	3				NaN	NaN	0	NaN	788	2816	3605
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3607	15.642	NaN	1010.4	30	0	160.44	0.034				-1	SVACPGAQK	9	44	459.22955408803807	916.4445552428762	2	459.228759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SVAC(Carbamidomethyl (C))PGAQK_	ENSG00000127993|ENST00000265732|RBM48;nc|ENSG00000127993|Q5RL73-2|RBM48	35.61828744233558	0.47037581924408073	3				NaN	NaN	0	NaN	789	2816	3605
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3611	15.657	NaN	3648.9	30	0	417.2	0.214	+			39053	SSSPVNVKK	9	57	473.27309474990545	944.5316365666109	2	473.2720947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSSPVNVKK_	ENSG00000153187|ENST00000640218|HNRNPU;ENST00000476241.2_2_1:245025757-245027609:-|nuORF;nc|ENSG00000153187|Q00839-2|HNRNPU	60.11826168202944	0.21262886028301267	3				NaN	NaN	0	NaN	790	2819	3610
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3612	15.66	NaN	2931.4	30	0	650.38	0.106			+	31588	QLSHAWTR	8	54	499.7621091833423	997.5096654334847	2	499.7618103027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QLSHAWTR_	REV__chr19:48399145-48404734|443|21.72|0.26|6.36|+|0|None,GRIN2D|1	47.91560031466742	0.6071945918984287	3				NaN	NaN	0	NaN	791	2819	3610
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3613	15.662	NaN	2299.3	30	0	282.07	0.106			+	9497	EKTLTIGQQG	10	68	537.7946479130397	1073.5747428928794	2	537.7936401367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EKTLTIGQQG_	REV__ENSG00000147050|ENST00000611820|KDM6A;REV__KDM6A|p.N906Mfs*31|1|0.53|ENSG00000147050|chrX:45076707-45076707|A/-|frameshift_variant;REV__KDM6A|p.T1081Pfs*2|1|0.15|ENSG00000147050|chrX:45082743-45082743|A/-|frameshift_variant;REV__nc|ENSG00000147050|O15550|KDM6A	54.722347961057174	0.4138398245444204	3				NaN	NaN	0	NaN	792	2819	3610
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3614	15.664	NaN	711.2	30	0	143.54	0.106			+	12171	GALPPAAG	8	29	327.18467678833474	652.3548006434695	2	327.18475341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GALPPAAG_	REV__ENST00000434404.2_1_1:229406689-229407103:-|nuORF	16.704963439144045	0.7946246187734944	3				NaN	NaN	0	NaN	793	2819	3610
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3615	15.666	NaN	2161.7	30	0	137	0.037	+			44609	TTDRYVQQK	9	70	569.7972733399365	1137.579993746673	2	570.298095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TTDRYVQQK_	ENSG00000057935|ENST00000405094|MTA3;ENSG00000182979|ENST00000331320|MTA1;ENST00000472767.5_1_2:42922919-42924972:+|nuORF;ENST00000475383.5_1_2:42922919-42935079:+|nuORF;MTA1|p.R546Afs*8|1|0.13|ENSG00000182979|chr14:105466433-105466433|C/-|frameshift_variant;MTA1|p.T578Pfs*18|1|0.07|ENSG00000182979|chr14:105466528-105466528|C/-|frameshift_variant;MTA3|p.G456Lfs*48|1|0.05|ENSG00000057935|chr2:42708935-42708936|-/ATTACTG|frameshift_variant;nc|ENSG00000057935|Q9BTC8-2|MTA3;nc|ENSG00000182979|Q13330-2|MTA1;nc|ENSG00000182979|Q13330-3|MTA1	35.15202426646627	0.4747332964206883	3				NaN	NaN	0	NaN	794	2819	3610
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3619	15.681	NaN	5073	30	0	2132.6	0.214	+			4906	ATQKPLVSK	9	57	486.2988363111682	970.5831196891364	2	486.2978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATQKPLVSK_	ENSG00000159166|ENST00000391967|LAD1;LAD1|p.G152Afs*67|1|0.17|ENSG00000159166|chr1:201386906-201386906|C/-|frameshift_variant	68.84614121027924	0.14577793175421136	3				NaN	NaN	0	NaN	795	2822	3618
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3620	15.684	NaN	2959.8	30	0	465.38	0.036	+			35052	SAEQHQRTL	9	61	535.2741512921358	1068.5337496510715	2	535.2733764648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAEQHQRTL_	ENSG00000135968|ENST00000309863|GCC2;ENST00000393321.2_3_2:109102933-109106471:+|nuORF	43.650786325866115	0.37743712540499297	3				NaN	NaN	0	NaN	796	2822	3618
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3628	15.702	NaN	8063	30	0	2875.3	0.214			+	39247	STALPGRTPRP	11	44	384.8882041475093	1151.642783042728	3	384.8878173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STALPGRTPRP_	REV__nc|ENSG00000170190|O15375-2|SLC16A5	35.17822180527639	0.6208003396870814	3				NaN	NaN	0	NaN	801	2825	3627
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3629	15.706	NaN	1559.1	30	0	218.29	0.106	+			18546	ISMHPIIRK	9	44	576.8289557295308	1151.6433585258615	2	576.8292846679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))ISM(Oxidation (M))HPIIRK_	ENSG00000215343|ENST00000400085|ZNF705D;ENSG00000215356|ENST00000400120|ZNF705B;ENST00000525473.1_1_11:71518673-71529252:-|nuORF;nc|ENSG00000214534|A8MWA4|ZNF705EP	51.33545320467046	0.2872990594074956	3				NaN	NaN	0	NaN	802	2825	3627
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3630	15.708	NaN	1641.1	30	0	180.54	0.035			+	-1	TSLCFQQQ	8	50	506.2326890036346	1010.4508250740693	2	506.2318115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_TSLC(Carbamidomethyl (C))FQQQ_	REV__ENST00000414661.1_1_2:13143779-13143995:-|nuORF;REV__ENST00000421112.1_1_2:13142712-13143995:-|nuORF	45.9519527083369	0.6193794311207887	3				NaN	NaN	0	NaN	803	2825	3627
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3643	15.735	NaN	11104	30	0	4489.4	0.214	+			34548	RVLDVTKKK	9	51	362.9051878143679	1085.6937340433037	3	362.9049072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVLDVTKKK_	ENSG00000164039|ENST00000296424|BDH2;ENST00000492366.5_1_4:104007535-104017411:-|nuORF;ENST00000513518.1_1_4:104013755-104017411:-|nuORF;nc|ENSG00000164039|Q9BUT1-2|BDH2	63.42647028704847	0.1850514934184437	3				NaN	NaN	0	NaN	813	2828	3642
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3644	15.739	NaN	3813.9	30	0	843.07	0.106	+			30536	QAKEKVKKK	9	55	543.8544424329001	1085.6943319326	2	543.8544311523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QAKEKVKKK_	ENSG00000179083|ENST00000683942|FAM133A	85.86182877749512	0.07653218437724067	3				NaN	NaN	0	NaN	814	2828	3642
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3645	15.741	NaN	780.78	30	0	51.057	0.106	+			37492	SLKTAGKSEP	10	41	509.2830810546875	NaN	0	509.2830810546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLKTAGKSEP_	ENSG00000066933|ENST00000356056|MYO9A;nc|ENSG00000066933|B2RTY4-2|MYO9A;nc|ENSG00000066933|B2RTY4-4|MYO9A;nc|ENSG00000066933|B2RTY4-5|MYO9A	38.753607047826485	0.3729281687199363	3				NaN	NaN	0	NaN	815	2828	3642
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3646	15.742	NaN	1527.8	30	0	233.08	0.106			+	-1	HEETVNTVM	9	50	538.2411587684459	1074.4677646036916	2	538.2420654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_HEETVNTVM(Oxidation (M))_	REV__LSAMP|p.T276M|1|0.21|ENSG00000185565|chr3:115841937-115841937|G/A|missense_variant	47.91560031466742	0.327412564698279	3				NaN	NaN	0	NaN	816	2828	3642
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3647	15.744	NaN	811.13	30	0	115.04	0.106	+			50351	WVKQQRCAVS	10	34	602.8134174941493	NaN	0	602.813232421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_WVKQQRCAVS_	ENSG00000100422|ENST00000216264|CERK	26.69291269510374	0.4125295221340092	3				NaN	NaN	0	NaN	817	2828	3642
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3648	15.746	NaN	516.84	30	0	99.936	0.035	+			22561	KTSLENIW	8	37	495.7655029296875	NaN	0	495.7655029296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KTSLENIW_	nc|ENSG00000185985|Q9H156-2|SLITRK2	21.9598887501803	1.7418937515398478	3				NaN	NaN	0	NaN	818	2828	3642
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3659	15.77	NaN	3391.7	30	0	603.18	0.214				-1	 	0	39	380.1857653862642	758.3569778393285	2	380.1853332519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	826	2831	3658
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3660	15.773	NaN	2556.2	30	0	219.45	0.106				-1	 	0	56	561.2803885318316	1120.546224130463	2	561.2803955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	827	2831	3658
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3661	15.775	NaN	2163.3	30	0	666.09	0.106				-1	EKMVVECKMNN	11	28	670.8023315472784	1339.5901101613567	2	670.8012084960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_EKM(Oxidation (M))VVECKMNN_	ENSG00000205186|ENST00000379071|FABP9	22.579656572578934	0.7529490144093228	3				NaN	NaN	0	NaN	828	2831	3658
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3662	15.777	NaN	2051.4	30	0	716.97	0.106			+	-1	RRMKKLMK	8	35	369.5609130859375	NaN	0	369.5609130859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_RRM(Oxidation (M))KKLMK_	REV__ARID3C|p.V16Wfs*119|1|0.46|ENSG00000205143|chr9:34627969-34627969|C/-|frameshift_variant	29.14955571784316	1.7418937515398478	3				NaN	NaN	0	NaN	829	2831	3658
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3663	15.779	NaN	582.39	30	0	78.899	0.106			+	158	AAIMFNLLL	9	36	503.2928771972656	NaN	0	503.2928771972656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AAIMFNLLL_	REV__ENSG00000138101|ENST00000406818|DTNB;REV__ENST00000472690.5_1_2:25819066-25872751:-|nuORF;REV__ENST00000493538.5_1_2:25803688-25875529:-|nuORF;REV__nc|ENSG00000138101|O60941-2|DTNB;REV__nc|ENSG00000138101|O60941-3|DTNB;REV__nc|ENSG00000138101|O60941-4|DTNB;REV__nc|ENSG00000138101|O60941-5|DTNB;REV__nc|ENSG00000138101|O60941-6|DTNB;REV__nc|ENSG00000138101|O60941-7|DTNB	25.450171626174864	0.34907449758287085	3				NaN	NaN	0	NaN	830	2831	3658
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3664	15.78	NaN	5062.5	30	0	2062.1	0.036			+	15787	GVTWIKRLS	9	62	530.3188975927328	1058.6232422522655	2	530.3187866210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GVTWIKRLS_	REV__ENSG00000119121|ENST00000360774|TRPM6;REV__nc|ENSG00000119121|Q9BX84-2|TRPM6;REV__nc|ENSG00000119121|Q9BX84-3|TRPM6;REV__nc|ENSG00000119121|Q9BX84-4|TRPM6;REV__nc|ENSG00000119121|Q9BX84-5|TRPM6;REV__nc|ENSG00000119121|Q9BX84-6|TRPM6;REV__nc|ENSG00000119121|Q9BX84-7|TRPM6;REV__TRPM6|p.E1956Kfs*25|1|0.33|ENSG00000119121|chr9:74728308-74728308|C/-|frameshift_variant	49.536043120802724	0.308405419312776	3				NaN	NaN	0	NaN	831	2831	3658
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3671	15.796	NaN	6344.2	30	0	2577.2	0.214	+			34251	RTGRITVEK	9	54	353.880678363882	NaN	0	353.880615234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTGRITVEK_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	35.61828744233558	0.29773779453147337	3				NaN	NaN	0	NaN	835	2834	3670
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3672	15.8	NaN	2375.6	30	0	473.89	0.106	+			16059	HAYEHSLGK	9	60	521.26001601531	1040.50547909742	2	521.260498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HAYEHSLGK_	ENSG00000105355|ENST00000221957|PLIN3;nc|ENSG00000105355|O60664-2|PLIN3;nc|ENSG00000105355|O60664-3|PLIN3;nc|ENSG00000105355|O60664-4|PLIN3	107.00750918261382	0.032051501805654005	3				NaN	NaN	0	NaN	836	2834	3670
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3673	15.802	NaN	818.95	30	0	71.33	0.106	+			41713	SVSDRSSLNK	10	46	546.7868423815037	NaN	0	546.7866821289062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVSDRSSLNK_	ARHGEF10L|p.P650Hfs*34|1|0.39|ENSG00000074964|chr1:17637904-17637904|C/-|frameshift_variant;ENSG00000074964|ENST00000361221|ARHGEF10L;ENST00000469726.5_1_1:17942561-18023872:+|nuORF;nc|ENSG00000074964|Q9HCE6-2|ARHGEF10L;nc|ENSG00000074964|Q9HCE6-3|ARHGEF10L;nc|ENSG00000074964|Q9HCE6-4|ARHGEF10L;nc|ENSG00000074964|Q9HCE6-5|ARHGEF10L	66.9202029811203	0.17776675719981952	3				NaN	NaN	0	NaN	837	2834	3670
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3674	15.804	NaN	1501.9	30	0	148.99	0.106	+			988	AEKKEMKTI	9	47	539.302960236336	NaN	0	539.3030395507812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEKKEMKTI_	ENSG00000163466|ENST00000315717|ARPC2;ENST00000487321.1_1_2:219114510-219118635:+|nuORF	42.86426827375447	0.2558691296974908	3				NaN	NaN	0	NaN	838	2834	3670
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3675	15.806	NaN	1306.2	30	0	181.77	0.106				-1	LSFLILPMQ	9	30	359.8705139160156	NaN	0	359.8705139160156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_LSFLILPM(Oxidation (M))Q_	ENSG00000130762|ENST00000378378|ARHGEF16;ENST00000464620.1_1_1:3388185-3390209:+|nuORF;ENST00000485984.1_1_1:3389348-3394597:+|nuORF;nc|ENSG00000130762|Q5VV41-2|ARHGEF16	39.252832667884924	0.27938773122138094	3				NaN	NaN	0	NaN	839	2834	3670
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3676	15.807	NaN	803.48	30	0	239.58	0.106			+	17246	HVVVSTTKN	9	33	492.7779541015625	NaN	0	492.7779541015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HVVVSTTKN_	REV__ENSG00000143341|ENST00000271588|HMCN1;REV__ENST00000485744.5_1_1:185931700-185962449:+|nuORF;REV__HMCN1|p.G3718Afs*6|1|0.04|ENSG00000143341|chr1:186113995-186113995|G/-|frameshift_variant;REV__HMCN1|p.L3491Hfs*10|1|0.12|ENSG00000143341|chr1:186095419-186095420|-/ATAT|frameshift_variant;REV__HMCN1|p.S4801Rfs*11|1|0.07|ENSG00000143341|chr1:186145536-186145537|-/AGAATAA|frameshift_variant;REV__HMCN1|p.V1339Gfs*22|1|0.42|ENSG00000143341|chr1:186000186-186000186|T/-|frameshift_variant;REV__HMCN1|p.Y2955Ifs*3|1|0.29|ENSG00000143341|chr1:186082933-186082934|-/A|frameshift_variant;REV__nc|ENSG00000143341|Q96RW7-2|HMCN1;REV__nc|ENSG00000143341|Q96RW7-3|HMCN1	23.04248740728303	0.3589936788096251	3				NaN	NaN	0	NaN	840	2834	3670
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3677	15.809	NaN	1173.6	30	0	179.91	0.034	+			5592	AVATNQPPK	9	40	463.2585895265658	NaN	0	463.2588806152344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AVATNQPPK_	ENSG00000050820|ENST00000162330|BCAR1;ENST00000566982.1_1_16:75263411-75272069:-|nuORF;nc|ENSG00000050820|P56945-2|BCAR1;nc|ENSG00000050820|P56945-3|BCAR1;nc|ENSG00000050820|P56945-4|BCAR1;nc|ENSG00000050820|P56945-5|BCAR1;nc|ENSG00000050820|P56945-6|BCAR1;nc|ENSG00000050820|P56945-7|BCAR1;nc|ENSG00000050820|P56945-8|BCAR1	40.77816245573522	0.2702456086868081	3				NaN	NaN	0	NaN	841	2834	3670
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3683	15.825	NaN	1755.9	30	0	267.93	0.214	+			20315	KEQEQAQKL	9	64	551.3000477886891	1100.585542644178	2	551.3003540039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEQEQAQKL_	ENSG00000136021|ENST00000360820|SCYL2	131.61620852596164	0.014413238321579053	3				NaN	NaN	0	NaN	844	2837	3682
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3684	15.829	NaN	2309.7	30	0	912.68	0.106				-1	 	0	37	415.8869087556028	1244.6388968670085	3	415.88616943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	845	2837	3682
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3685	15.831	NaN	2770.6	30	0	684.79	0.106				-1	ITTVVTMGCE	10	55	563.7611465296734	1125.5077401261467	2	563.7617797851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_ITTVVTM(Oxidation (M))GC(Carbamidomethyl (C))E_	ENSG00000117983|ENST00000529681|MUC5B;ENSG00000117983|ENST00000529681|MUC5B;MUC5B|p.E2447Vfs*233|1|0.15|ENSG00000117983|chr11:1244218-1244219|TG/-|frameshift_variant;MUC5B|p.E2929Gfs*98|1|0.13|ENSG00000117983|chr11:1245660-1245661|-/GC|frameshift_variant;MUC5B|p.E2929Gfs*98|1|0.13|ENSG00000117983|chr11:1245660-1245661|-/GC|frameshift_variant;MUC5B|p.P2717Qfs*3|2|0.21|ENSG00000117983|chr11:1245025-1245025|C/-|frameshift_variant;MUC5B|p.P3417Qfs*3|1|0.41|ENSG00000117983|chr11:1247125-1247125|C/-|frameshift_variant;MUC5B|p.P3417Qfs*3|1|0.41|ENSG00000117983|chr11:1247125-1247125|C/-|frameshift_variant;MUC5B|p.S3126Pfs*13|1|0.37|ENSG00000117983|chr11:1246251-1246251|C/-|frameshift_variant;MUC5B|p.S3126Pfs*13|1|0.37|ENSG00000117983|chr11:1246251-1246251|C/-|frameshift_variant;MUC5B|p.S3878Pfs*27|1|0.13|ENSG00000117983|chr11:1248507-1248507|C/-|frameshift_variant;MUC5B|p.S3878Pfs*27|1|0.13|ENSG00000117983|chr11:1248507-1248507|C/-|frameshift_variant;MUC5B|p.S4017Lfs*56|1|0.22|ENSG00000117983|chr11:1248928-1248929|-/C|frameshift_variant;MUC5B|p.S4017Lfs*56|1|0.22|ENSG00000117983|chr11:1248928-1248929|-/C|frameshift_variant;MUC5B|p.T4706Pfs*4|2|0.37|ENSG00000117983|chr11:1250996-1250996|A/-|frameshift_variant;MUC5B|p.T4706Pfs*4|2|0.37|ENSG00000117983|chr11:1250996-1250996|A/-|frameshift_variant	26.69291269510374	0.6618461711292317	3				NaN	NaN	0	NaN	846	2837	3682
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3686	15.832	NaN	998.86	30	0	147.69	0.038	+			20052	KEKEAENERL	10	44	623.3272094726562	NaN	0	623.3272094726562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEKEAENERL_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	85.86182877749512	0.07061569993707435	3				NaN	NaN	0	NaN	847	2837	3682
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3692	15.848	NaN	5017.5	30	0	519.19	0.213			+	32051	QRVEEYWKN	9	79	626.3088402725785	1250.603127611957	2	626.308349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QRVEEYWKN_	REV__ENSG00000197818|ENST00000361573|SLC9A8;REV__nc|ENSG00000197818|Q9Y2E8-2|SLC9A8	76.7741389293348	0.11149722112137898	3				NaN	NaN	0	NaN	850	2840	3691
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3693	15.852	NaN	818.63	30	0	244.77	0.106			+	45731	VACTRAAAR	9	32	459.7485639432148	NaN	0	459.74847412109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VACTRAAAR_	REV__ENST00000305943.7_2_1:228674775-228674919:+|nuORF	29.14955571784316	0.3303970763161698	3				NaN	NaN	0	NaN	851	2840	3691
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3694	15.854	NaN	1540.2	30	0	314.5	0.106			+	13865	GQYAYPVEQP	10	32	384.51696349069334	1150.52906107228	3	384.5163879394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GQYAYPVEQP_	REV__ENSG00000134216|ENST00000369740|CHIA;REV__nc|ENSG00000134216|Q9BZP6-2|CHIA;REV__nc|ENSG00000134216|Q9BZP6-3|CHIA	14.137123925751023	0.7446123510383054	3				NaN	NaN	0	NaN	852	2840	3691
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3695	15.856	NaN	865.48	30	0	197.95	0.106	+			7534	DGSQIRGLRI	10	29	557.8217163085938	NaN	0	557.8217163085938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DGSQIRGLRI_	ENST00000478137.1_1_7:1199695-1199887:-|nuORF	24.231819034082204	0.4201028297492154	3				NaN	NaN	0	NaN	853	2840	3691
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3696	15.858	NaN	990.94	30	0	171.42	0.106			+	-1	VVDCGYQCNA	10	38	593.2389744926545	NaN	0	593.2391357421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C)	_VVDC(Carbamidomethyl (C))GYQC(Carbamidomethyl (C))NA_	REV__ENSG00000168743|ENST00000379987|NPNT;REV__nc|ENSG00000168743|Q6UXI9-2|NPNT;REV__nc|ENSG00000168743|Q6UXI9-3|NPNT;REV__nc|ENSG00000168743|Q6UXI9-4|NPNT;REV__nc|ENSG00000168743|Q6UXI9-5|NPNT;REV__nc|ENSG00000168743|Q6UXI9-6|NPNT;REV__NPNT|p.R542Gfs*10|1|0.43|ENSG00000168743|chr4:105968911-105968911|A/-|frameshift_variant	26.69291269510374	0.4125295221340092	3				NaN	NaN	0	NaN	854	2840	3691
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3697	15.859	NaN	939.22	30	0	197.77	0.106			+	26299	LSVEPLSIEK	10	32	372.2160949707031	NaN	0	372.2160949707031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSVEPLSIEK_	REV__ENSG00000004846|ENST00000404938|ABCB5;REV__nc|ENSG00000004846|Q2M3G0-1|ABCB5	28.081489160057373	0.40797012399963245	3				NaN	NaN	0	NaN	855	2840	3691
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3698	15.861	NaN	793.35	30	0	348.15	0.037				-1	EAQNTVSMKQ	10	26	576.2704467773438	NaN	0	576.2704467773438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_EAQNTVSM(Oxidation (M))KQ_	ENSG00000140481|ENST00000398814|CCDC33;nc|ENSG00000140481|Q8N5R6-2|CCDC33;nc|ENSG00000140481|Q8N5R6-4|CCDC33;nc|ENSG00000140481|Q8N5R6-5|CCDC33;nc|ENSG00000140481|Q8N5R6|CCDC33	13.45404412870281	0.4201028297492154	3				NaN	NaN	0	NaN	856	2840	3691
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3705	15.879	NaN	2397.1	30	0	771.37	0.214			+	-1	RSMLMGTR	8	50	492.2410584626949	982.4675639921899	2	492.240478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_RSM(Oxidation (M))LM(Oxidation (M))GTR_	REV__ENST00000473945.1_1_7:103122632-103126663:-|nuORF	23.52269567125451	0.777708487568066	3				NaN	NaN	0	NaN	860	2843	3704
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3706	15.882	NaN	962.39	30	0	206.31	0.032			+	37296	SLCILLFFVF	10	31	401.227294921875	NaN	0	401.227294921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLCILLFFVF_	REV__L1PB1_dup5905|chr7:93807211-93809400:+|2.023350116566841|0.2056128638309657|3.3|382.0|135|3|anti-sense	31.529811441608018	0.39664753963064203	3				NaN	NaN	0	NaN	861	2843	3704
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3712	15.898	NaN	2717.1	30	0	403.97	0.213	+			34185	RTCWETTKK	9	59	605.3069083868542	1208.5992638405082	2	605.306396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_RTC(Carbamidomethyl (C))WETTKK_	ENST00000504956.5_1_4:87869676-87967907:+|nuORF;ENST00000511442.1_2_4:87869713-87967910:+|nuORF	61.691277971877994	0.19951612995419254	3				NaN	NaN	0	NaN	864	2846	3711
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3713	15.902	NaN	4002.5	30	0	584.94	0.106	+			34186	RTCWETTKK	9	70	403.8737306994629	1208.5993626985887	3	404.2075500488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_RTC(Carbamidomethyl (C))WETTKK_	ENST00000504956.5_1_4:87869676-87967907:+|nuORF;ENST00000511442.1_2_4:87869713-87967910:+|nuORF	92.23892857375223	0.05855307001735979	3				NaN	NaN	0	NaN	865	2846	3711
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3714	15.904	NaN	1353.1	30	0	570.42	0.035	+			31009	QESQTTRSV	9	39	518.2587801181245	NaN	0	518.2584228515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QESQTTRSV_	ENSG00000145113|ENST00000463781|MUC4;MUC4|p.L3985Ffs*274|1|0.3|ENSG00000145113|chr3:195779627-195779627|G/-|frameshift_variant;MUC4|p.N4902Tfs*8|1|0.37|ENSG00000145113|chr3:195761027-195761027|T/-|frameshift_variant;nc|ENSG00000145113|Q99102-10|MUC4;nc|ENSG00000145113|Q99102-11|MUC4;nc|ENSG00000145113|Q99102-15|MUC4;nc|ENSG00000145113|Q99102-16|MUC4;nc|ENSG00000145113|Q99102-17|MUC4;nc|ENSG00000145113|Q99102-2|MUC4;nc|ENSG00000145113|Q99102-3|MUC4;nc|ENSG00000145113|Q99102-5|MUC4;nc|ENSG00000145113|Q99102-7|MUC4;nc|ENSG00000145113|Q99102-8|MUC4;nc|ENSG00000145113|Q99102-9|MUC4	66.96192283764107	0.11962625698446946	3				NaN	NaN	0	NaN	866	2846	3711
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3721	15.92	NaN	1221.8	30	0	421.62	0.145	+			15298	GTVDKKMVEK	10	42	567.81396484375	NaN	0	567.81396484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTVDKKMVEK_	CBL|p.L272*|1|0.25|ENSG00000110395|chr11:119274894-119274894|T/-|frameshift_variant;CBL|p.V581Cfs*4|1|0.08|ENSG00000110395|chr11:119285359-119285360|-/C|frameshift_variant;ENSG00000110395|ENST00000264033|CBL	76.16968421966216	0.118310876128328	3				NaN	NaN	0	NaN	870	2849	3720
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3730	15.942	NaN	2567.6	30	0	965.07	0.214				-1	CASAGAPAHMP	11	56	535.2321159306633	1068.4496789281266	2	535.2322387695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_C(Carbamidomethyl (C))ASAGAPAHMP_	ENST00000473758.5_1_14:23537521-23537608:-|nuORF	42.396135135203025	0.5251566046092361	3				NaN	NaN	0	NaN	876	2852	3729
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3731	15.946	NaN	1292.6	30	0	163.1	0.106			+	50012	WAYGKITVEGS	11	45	404.2070007324219	NaN	0	404.2070007324219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WAYGKITVEGS_	REV__ENSG00000139531|ENST00000266971|SUOX	29.550750289552195	0.43372083775723597	3				NaN	NaN	0	NaN	877	2852	3729
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3732	15.948	NaN	1347.9	30	0	167.49	0.04			+	51139	YNRWGEVMHY	10	54	685.8019090797928	1369.5892652263856	2	685.801025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_YNRWGEVM(Oxidation (M))HY_	REV__ENST00000368324.4_1_1:155852837-155852948:+|nuORF	49.44154591367651	0.46214596422418036	3				NaN	NaN	0	NaN	878	2852	3729
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3738	15.965	NaN	4432.7	30	0	772.16	0.214	+			22401	KTISQAVNK	9	70	494.79374442386256	987.5729359145251	2	494.7926940917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTISQAVNK_	ENSG00000061676|ENST00000361354|NCKAP1;ENST00000495619.1_1_2:183822183-183829436:-|nuORF;nc|ENSG00000061676|Q9Y2A7-2|NCKAP1;NCKAP1|p.M725Kfs*19|1|0.04|ENSG00000061676|chr2:182953311-182953312|-/AGAGTATT|frameshift_variant	118.23318122614258	0.022269350047911186	3				NaN	NaN	0	NaN	881	2855	3737
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3739	15.968	NaN	3370	30	0	490.09	0.106	+			12679	GEKDTAKSL	9	60	474.7543697567486	947.4941865802972	2	474.75311279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEKDTAKSL_	ENSG00000013364|ENST00000357402|MVP	68.84614121027924	0.14577793175421136	3				NaN	NaN	0	NaN	882	2855	3737
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3740	15.97	NaN	2560.3	30	0	1461.8	0.106				-1	RVMKALVNR	9	47	551.8300464013419	1101.6455398694836	2	551.8302612304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_RVM(Oxidation (M))KALVNR_	ENSG00000149136|ENST00000278412|SSRP1;ENST00000293880.9_1_11:57098199-57100416:-|nuORF	35.61828744233558	0.47037581924408073	3				NaN	NaN	0	NaN	883	2855	3737
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3741	15.972	NaN	2298.1	30	0	456.7	0.106	+			71	AAATPAIKK	9	48	435.774482110742	869.534411288284	2	435.7738342285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AAATPAIKK_	DIDO1|p.F711Lfs*22|1|0.35|ENSG00000101191|chr20:62896314-62896314|A/-|frameshift_variant;DIDO1|p.G1745Afs*119|1|0.26|ENSG00000101191|chr20:62880722-62880722|C/-|frameshift_variant;DIDO1|p.P1738Hfs*126|1|0.39|ENSG00000101191|chr20:62880743-62880743|G/-|frameshift_variant;DIDO1|p.S1285Afs*76|1|0.39|ENSG00000101191|chr20:62882104-62882104|G/-|frameshift_variant;ENSG00000101191|ENST00000395343|DIDO1;nc|ENSG00000101191|Q9BTC0-1|DIDO1	64.20726635412375	0.17854274437659667	3				NaN	NaN	0	NaN	884	2855	3737
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3742	15.974	NaN	1808.7	30	0	1204.5	0.106				-1	 	0	28	413.22743224409686	824.4403115549937	2	413.22674560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	885	2855	3737
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3743	15.976	NaN	2067.3	30	0	1133.3	0.106	+			30858	QEHQGHQTF	9	31	556.2498283137371	1110.4851036942741	2	556.25	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QEHQGHQTF_	ENSG00000132274|ENST00000379965|TRIM22;ENST00000460454.1_1_11:5717462-5717939:+|nuORF;ENST00000480395.5_1_11:5717822-5718591:+|nuORF;nc|ENSG00000132274|Q8IYM9-2|TRIM22;TRIM22|p.S376Tfs*3|1|0.09|ENSG00000132274|chr11:5709277-5709278|-/CATG|frameshift_variant	33.921630207806714	0.48623198279849766	3				NaN	NaN	0	NaN	886	2855	3737
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3744	15.977	NaN	3381.2	30	0	861.67	0.035			+	22257	KTASGGKMQS	10	55	505.74964712886157	1009.4847413245232	2	505.74896240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_KTASGGKM(Oxidation (M))QS_	REV__GCKR|p.R259Q|1|0.38|ENSG00000084734|chr2:27505743-27505743|G/A|missense_variant	65.15724298150197	0.31893571707528906	3				NaN	NaN	0	NaN	887	2855	3737
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3748	15.992	NaN	4286.2	30	0	872.88	0.214	+			17999	IIAKVTAKK	9	60	486.3351828999797	970.6558128667594	2	486.3346862792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IIAKVTAKK_	ENSG00000155008|ENST00000373173|APOOL	101.25262130126117	0.03792372629710479	3				NaN	NaN	0	NaN	888	2858	3747
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3749	15.996	NaN	1384.4	30	0	439.65	0.106	+			21615	KPNPGSNKP	9	41	469.7562561035156	NaN	0	469.7562561035156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KPNPGSNKP_	MRPL15|p.K34N|1|0.16|ENSG00000137547|chr8:54135385-54135385|G/T|missense_variant	42.396135135203025	0.2590952873412954	3				NaN	NaN	0	NaN	889	2858	3747
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3750	15.998	NaN	2005.8	30	0	396.02	0.106			+	9058	EGGGKDQLK	9	38	466.246429490927	930.4783060486541	2	466.24554443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EGGGKDQLK_	REV__ENST00000452532.1_1_X:55934586-55934826:+|nuORF	51.33545320467046	0.2872990594074956	3				NaN	NaN	0	NaN	890	2858	3747
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3751	15.999	NaN	1275.4	30	0	110.11	0.106			+	9192	EGQMTKRR	8	60	503.2666523427165	1004.518751752233	2	503.26708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EGQMTKRR_	REV__ENSG00000204463|ENST00000676615|BAG6;REV__nc|ENSG00000204463|P46379-2|BAG6;REV__nc|ENSG00000204463|P46379|BAG6	40.77816245573522	0.6514838689002179	3				NaN	NaN	0	NaN	891	2858	3747
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3752	16.001	NaN	1195.6	30	0	526.78	0.106			+	31796	QPLYYLIQ	8	33	519.2860863400665	1036.557619746933	2	519.2865600585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QPLYYLIQ_	REV__ENSG00000180263|ENST00000343958|FGD6;REV__ENST00000451107.3_1_12:95475298-95611245:-|nuORF;REV__nc|ENSG00000180263|Q6ZV73-2|FGD6	25.450171626174864	0.7628259754767981	3				NaN	NaN	0	NaN	892	2858	3747
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3753	16.003	NaN	2783.4	30	0	1136.5	0.036	+			15101	GTQKQQGLMK	10	55	559.8043572451525	1117.5941615571048	2	560.3056030273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTQKQQGLMK_	ENSG00000134398|ENST00000256797|ERN2;ERN2|p.L515Wfs*48|1|0.41|ENSG00000134398|chr16:23700665-23700665|G/-|frameshift_variant;ERN2|p.Q822Rfs*35|1|0.26|ENSG00000134398|chr16:23692019-23692019|G/-|frameshift_variant	66.96192283764107	0.30252237217063654	3				NaN	NaN	0	NaN	893	2858	3747
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3763	16.025	NaN	17121	30	0	5611.2	0.214	+			48872	VVDAKTLKK	9	64	334.5504321175189	1000.6294669527567	3	334.550048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVDAKTLKK_	ENSG00000079246|ENST00000392132|XRCC5;ENST00000493706.1_1_2:216990646-216992426:+|nuORF;XRCC5|p.E287Kfs*11|2|0.25|ENSG00000079246|chr2:216127589-216127589|A/-|frameshift_variant;XRCC5|p.Q488Rfs*29|1|0.06|ENSG00000079246|chr2:216141305-216141305|C/-|frameshift_variant	47.657333605630114	0.33044192980041115	3				NaN	NaN	0	NaN	900	2861	3762
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3764	16.028	NaN	4071.4	30	0	649.25	0.106	+			48873	VVDAKTLKK	9	59	501.32222206126306	1000.6298911893261	2	501.32147216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVDAKTLKK_	ENSG00000079246|ENST00000392132|XRCC5;ENST00000493706.1_1_2:216990646-216992426:+|nuORF;XRCC5|p.E287Kfs*11|2|0.25|ENSG00000079246|chr2:216127589-216127589|A/-|frameshift_variant;XRCC5|p.Q488Rfs*29|1|0.06|ENSG00000079246|chr2:216141305-216141305|C/-|frameshift_variant	104.01359247289065	0.03510646158778409	3				NaN	NaN	0	NaN	901	2861	3762
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3765	16.03	NaN	3052.9	30	0	961.95	0.106	+			41863	SVTGSAVSK	9	35	418.2303271915366	834.4461014498733	2	418.2298889160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVTGSAVSK_	ENSG00000073921|ENST00000393346|PICALM;nc|ENSG00000073921|Q13492-2|PICALM;nc|ENSG00000073921|Q13492-3|PICALM;nc|ENSG00000073921|Q13492-5|PICALM;PICALM|p.L275Gfs*3|1|0.14|ENSG00000073921|chr11:86003436-86003437|-/TTCC|frameshift_variant	44.377184641726394	0.36891676396732553	3				NaN	NaN	0	NaN	902	2861	3762
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3766	16.032	NaN	4257.9	30	0	2332.9	0.106				-1	QHMDKLHML	9	41	390.1916220592004	NaN	0	390.5259094238281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_QHM(Oxidation (M))DKLHML_	TRPV5|p.L33M|1|0.43|ENSG00000127412|chr7:142933363-142933363|G/T|missense_variant	34.172542307311794	0.30503706118289736	3				NaN	NaN	0	NaN	903	2861	3762
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3767	16.034	NaN	748.08	30	0	155.94	0.106	+			9743	ENEAQKNNT	9	40	524.2396240234375	NaN	0	524.2396240234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ENEAQKNNT_	RBM44|p.Y233Kfs*26|1|0.06|ENSG00000177483|chr2:237827498-237827499|-/AAATTTGAAAATGAAGCTCAAAAAAATAA|frameshift_variant	39.252832667884924	0.27938773122138094	3				NaN	NaN	0	NaN	904	2861	3762
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3768	16.036	NaN	2671.9	30	0	1493	0.106	+			30877	QEKEEQHQL	9	42	584.7844110282256	1167.554269123251	2	584.7843627929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QEKEEQHQL_	ENSG00000107581|ENST00000369144|EIF3A;nc|ENSG00000107581|Q14152-2|EIF3A	70.8162118820467	0.13725933411854815	3				NaN	NaN	0	NaN	905	2861	3762
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3769	16.037	NaN	1327.7	30	0	206.37	0.036			+	29924	PLTEFSARAC	10	45	547.7665060680179	NaN	0	547.76708984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PLTEFSARAC_	REV__ENSG00000117640|ENST00000374303|MTFR1L;REV__ENST00000531361.1_1_1:26149550-26156105:+|nuORF;REV__nc|ENSG00000117640|Q9H019-2|MTFR1L;REV__nc|ENSG00000117640|Q9H019-3|MTFR1L	29.14955571784316	0.4044631218331212	3				NaN	NaN	0	NaN	906	2861	3762
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3781	16.063	NaN	2563.8	30	0	1118.2	0.144			+	9543	ELEAVCLGPAG	11	41	529.7651290780545	1057.515705222909	2	529.765380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ELEAVCLGPAG_	REV__ENSG00000139364|ENST00000682704|TMEM132B;REV__ENST00000534945.2_1_12:125834026-126068624:+|nuORF;REV__nc|ENSG00000139364|Q14DG7-2|TMEM132B;REV__nc|ENSG00000139364|Q14DG7|TMEM132B;REV__TMEM132B|p.F483Lfs*2|1|0.26|ENSG00000139364|chr12:125644098-125644098|T/-|frameshift_variant	27.882242232435846	0.6973292152807183	3				NaN	NaN	0	NaN	915	2864	3780
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3786	16.079	NaN	10643	30	0	1728.8	0.214	+			44986	TVDEKNYTK	9	79	549.2773950581934	1096.5402371831867	2	549.2777709960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVDEKNYTK_	ENSG00000182551|ENST00000327435|ADI1;nc|ENSG00000182551|Q9BV57-2|ADI1	133.9934435666947	0.013297982075521412	3				NaN	NaN	0	NaN	917	2867	3785
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3787	16.082	NaN	5065.9	30	0	505.03	0.106	+			41074	SVIKTQETK	9	68	517.2984345508482	1032.5823161684964	2	517.2987060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVIKTQETK_	ENSG00000120690|ENST00000239882|ELF1;nc|ENSG00000120690|P32519-2|ELF1	106.68306549817024	0.032382560583716295	3				NaN	NaN	0	NaN	918	2867	3785
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3788	16.084	NaN	10866	30	0	4411.6	0.106			+	40198	STSAPWPNNAK	11	43	391.52844653258035	1171.563510197941	3	391.5277404785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STSAPWPNNAK_	REV__ENSG00000139269|ENST00000266646|INHBE;REV__ENST00000551553.1_1_12:57846273-57850628:+|nuORF	26.69291269510374	0.70980431218767	3				NaN	NaN	0	NaN	919	2867	3785
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3789	16.086	NaN	19884	30	0	8468.3	0.106	+			26082	LSMGNAMFVK	10	67	366.5208953825344	1096.5408567478032	3	366.52056884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSMGNAMFVK_	ENSG00000196136|ENST00000393078|SERPINA3;nc|ENSG00000196136|P01011-2|SERPINA3	33.921630207806714	0.6028135429846169	3				NaN	NaN	0	NaN	920	2867	3785
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3790	16.088	NaN	2260	30	0	344.35	0.106	+			9159	EGNTDLHEH	9	50	526.2256062427327	1050.4366595522654	2	526.2261352539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EGNTDLHEH_	ENST00000437864.1_1_9:100396806-100398280:-|nuORF	49.44154591367651	0.3095138337212152	3				NaN	NaN	0	NaN	921	2867	3785
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3791	16.09	NaN	3399.2	30	0	531.29	0.106	+			40490	STYGTHIHEK	10	64	586.7888302613106	1171.5631075894212	2	586.788818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STYGTHIHEK_	ENSG00000119203|ENST00000238112|CPSF3	91.26522074875469	0.12383023862516404	3				NaN	NaN	0	NaN	922	2867	3785
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3792	16.091	NaN	1323.6	30	0	183.7	0.034			+	41952	SVVTAQTQT	9	43	467.74563953838276	933.4767261435655	2	467.7452087402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVVTAQTQT_	REV__ENSG00000124440|ENST00000377670|HIF3A;REV__ENST00000244302.8_1_19:46800333-46834596:+|nuORF;REV__ENST00000528563.5_1_19:46807167-46825077:+|nuORF;REV__HIF3A|p.G326Dfs*15|1|0.32|ENSG00000124440|chr19:46312601-46312601|G/-|frameshift_variant;REV__HIF3A|p.Q441Kfs*36|1|0.36|ENSG00000124440|chr19:46321948-46321948|C/-|frameshift_variant;REV__HIF3A|p.R523Vfs*27|1|0.34|ENSG00000124440|chr19:46329330-46329330|C/-|frameshift_variant;REV__HIF3A|p.R548Gfs*2|1|0.19|ENSG00000124440|chr19:46329404-46329404|C/-|frameshift_variant;REV__HIF3A|p.Y493Tfs*57|1|0.29|ENSG00000124440|chr19:46329238-46329238|C/-|frameshift_variant;REV__nc|ENSG00000124440|Q9Y2N7-2|HIF3A;REV__nc|ENSG00000124440|Q9Y2N7-3|HIF3A;REV__nc|ENSG00000124440|Q9Y2N7-5|HIF3A;REV__nc|ENSG00000124440|Q9Y2N7-6|HIF3A;REV__nc|ENSG00000124440|Q9Y2N7-7|HIF3A	47.657333605630114	0.33044192980041115	3				NaN	NaN	0	NaN	923	2867	3785
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3800	16.111	NaN	3869	30	0	242.49	0.214	+			42968	TEKEGKDQEL	10	74	588.7909636352022	1175.5673743372042	2	588.7905883789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEKEGKDQEL_	ENSG00000137497|ENST00000393695|NUMA1;nc|ENSG00000137497|Q14980-2|NUMA1;nc|ENSG00000137497|Q14980-3|NUMA1;nc|ENSG00000137497|Q14980-4|NUMA1;NUMA1|p.A1067S|1|0.25|ENSG00000137497|chr11:72014304-72014304|C/A|missense_variant;NUMA1|p.K1766Rfs*2|1|0.39|ENSG00000137497|chr11:72007357-72007357|G/-|frameshift_variant;NUMA1|p.L1786Pfs*18|1|0.23|ENSG00000137497|chr11:72007295-72007296|-/G|frameshift_variant	99.01295224348159	0.08062808246117298	3				NaN	NaN	0	NaN	928	2870	3799
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3801	16.115	NaN	1214.4	30	0	191.67	0.106	+			20797	KIAKQIVQK	9	53	528.3507080078125	NaN	0	528.3507080078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KIAKQIVQK_	ENSG00000184787|ENST00000345496|UBE2G2;ENST00000477954.5_1_21:46191294-46194726:-|nuORF;ENST00000481546.1_1_21:46191294-46193735:-|nuORF;ENST00000491513.5_1_21:46191294-46199096:-|nuORF;ENST00000497630.5_1_21:46191294-46221727:-|nuORF;nc|ENSG00000184787|P60604-2|UBE2G2	42.396135135203025	0.2590952873412954	3				NaN	NaN	0	NaN	929	2870	3799
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3802	16.117	NaN	4472	30	0	554.43	0.106	+			34420	RTTHNIIEK	9	65	556.3150035299684	1110.6154541267367	2	556.314697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RTTHNIIEK_	ENSG00000198911|ENST00000361204|SREBF2;nc|ENSG00000198911|Q12772-2|SREBF2	68.84614121027924	0.14577793175421136	3				NaN	NaN	0	NaN	930	2870	3799
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3803	16.119	NaN	6081.1	30	0	1887.2	0.106	+			6455	AVYGQKEIHRK	11	66	443.58614188284184	1327.7365962487256	3	443.5855712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVYGQKEIHRK_	ENSG00000145907|ENST00000356245|G3BP1;ENST00000413279.1_1_2:136269117-136269381:-|nuORF;ENST00000519832.1_1_5:151166169-151170647:+|nuORF;nc|ENSG00000145907|Q13283-2|G3BP1	29.170058357718403	0.683821074385409	3				NaN	NaN	0	NaN	931	2870	3799
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3804	16.12	NaN	1513.8	30	0	257.55	0.106	+			30043	PPSSSPAGR	9	35	428.21983506778923	854.4251172023785	2	428.2190246582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PPSSSPAGR_	ENST00000309909.9_2_12:117466288-117466417:+|nuORF	40.77816245573522	0.41113185337114944	3				NaN	NaN	0	NaN	932	2870	3799
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3805	16.122	NaN	4939.6	30	0	1930.3	0.037				-1	RCVMVLVNAA	10	36	383.5351587723071	1147.5836469171213	3	383.53515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),Oxidation (M)	_RC(Carbamidomethyl (C))VM(Oxidation (M))VLVNAA_	ENSG00000175471|ENST00000515393|MCTP1;MCTP1|p.K875Rfs*4|3|0.53|ENSG00000175471|chr5:94714873-94714873|T/-|frameshift_variant;nc|ENSG00000175471|Q6DN14-2|MCTP1;nc|ENSG00000175471|Q6DN14-3|MCTP1;nc|ENSG00000175471|Q6DN14-4|MCTP1;nc|ENSG00000175471|Q6DN14-5|MCTP1	33.921630207806714	0.6028135429846169	3				NaN	NaN	0	NaN	933	2870	3799
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3806	16.123	NaN	901.5	30	0	256.19	0.139			+	30441	PYPKAVAQA	9	35	472.7615159323556	NaN	0	472.7613525390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PYPKAVAQA_	REV__ENST00000248451.7_1_2:219137510-219137657:+|nuORF	40.77816245573522	0.2702456086868081	3				NaN	NaN	0	NaN	934	2870	3799
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3814	16.142	NaN	2019.3	30	0	178.02	0.214	+			355	AAQKNMALK	9	59	487.7765789527676	973.5386049723352	2	487.7759704589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAQKNMALK_	ENSG00000100345|ENST00000216181|MYH9;SYNDIG1-MYH9|1|fusion	56.72105179125745	0.24094814563026265	3				NaN	NaN	0	NaN	939	2873	3813
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3815	16.146	NaN	1147.2	30	0	163.88	0.106			+	50897	YGAGAGSAKAG	11	41	455.22544631945055	908.4363397057011	2	455.22479248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YGAGAGSAKAG_	REV__ENSG00000163395|ENST00000335211|IGFN1;REV__IGFN1|p.K745Qfs*40|1|0.22|ENSG00000163395|chr1:201217290-201217291|-/C|frameshift_variant;REV__IGFN1|p.R1136Gfs*8|2|0.4|ENSG00000163395|chr1:201226110-201226110|C/-|frameshift_variant	58.22992032128504	0.3392555181951113	3				NaN	NaN	0	NaN	940	2873	3813
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3816	16.148	NaN	819.45	30	0	151.45	0.106			+	44066	TPSPSPSPQ	9	28	449.2192180148668	NaN	0	449.2187194824219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TPSPSPSPQ_	REV__ENSG00000140464|ENST00000268058|PML;REV__nc|ENSG00000140464|P29590-10|PML;REV__nc|ENSG00000140464|P29590-11|PML;REV__nc|ENSG00000140464|P29590-12|PML;REV__nc|ENSG00000140464|P29590-13|PML;REV__nc|ENSG00000140464|P29590-14|PML;REV__nc|ENSG00000140464|P29590-2|PML;REV__nc|ENSG00000140464|P29590-3|PML;REV__nc|ENSG00000140464|P29590-4|PML;REV__nc|ENSG00000140464|P29590-5|PML;REV__nc|ENSG00000140464|P29590-8|PML;REV__nc|ENSG00000140464|P29590-9|PML;REV__PML|p.K394Efs*22|1|0.53|ENSG00000140464|chr15:74023400-74023401|-/G|frameshift_variant	27.882242232435846	0.3367954786602879	3				NaN	NaN	0	NaN	941	2873	3813
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3817	16.15	NaN	1170.7	30	0	362.77	0.106			+	50160	WKVSLLLK	8	43	493.8211866242459	NaN	0	493.82122802734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_WKVSLLLK_	REV__ENSG00000121879|ENST00000263967|PIK3CA	34.172542307311794	1.7418937515398478	3				NaN	NaN	0	NaN	942	2873	3813
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3818	16.152	NaN	763.57	30	0	139.41	0.033			+	1686	AGTHAHLR	8	39	431.73431825242636	NaN	0	431.7342224121094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AGTHAHLR_	REV__ENST00000593209.5_2_17:40340836-40341070:-|nuORF	24.20275056022122	1.7418937515398478	3				NaN	NaN	0	NaN	943	2873	3813
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3827	16.171	NaN	7129.1	30	0	1624.8	0.214	+			15598	GVIKAVDKK	9	60	479.3087356619212	956.6029183906425	2	479.30780029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVIKAVDKK_	ENSG00000156508|ENST00000309268|EEF1A1;ENST00000417549.1_1_13:28789725-28790031:+|nuORF;ENST00000419025.1_1_3:183744159-183744318:-|nuORF;ENST00000436459.2_1_9:135895553-135896258:+|nuORF;ENST00000443590.1_1_2:107313789-107313948:-|nuORF;ENST00000513637.1_1_5:43495177-43495438:-|nuORF;ENST00000559385.1_1_15:53229359-53229566:-|nuORF;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	112.41091882917199	0.026537921851008135	3				NaN	NaN	0	NaN	949	2876	3826
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3828	16.175	NaN	2089.4	30	0	440.05	0.106			+	-1	EMENKRGL	8	49	496.7457527998816	991.4769526665632	2	496.7448425292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_EM(Oxidation (M))ENKRGL_	REV__ARHGAP29|p.K371Sfs*12|1|0.32|ENSG00000137962|chr1:94202575-94202575|T/-|frameshift_variant;REV__ARHGAP29|p.K679Rfs*35|1|0.28|ENSG00000137962|chr1:94184945-94184945|T/-|frameshift_variant;REV__ENSG00000137962|ENST00000260526|ARHGAP29;REV__nc|ENSG00000137962|Q52LW3-2|ARHGAP29	50.0245360154114	0.5941082100236891	3				NaN	NaN	0	NaN	950	2876	3826
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3829	16.177	NaN	501.7	30	0	61.11	0.106			+	-1	KMLFGSAKH	9	35	517.7739868164062	NaN	0	517.7739868164062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_KM(Oxidation (M))LFGSAKH_	REV__ENSG00000170950|ENST00000304801|PGK2	29.14955571784316	0.3303970763161698	3				NaN	NaN	0	NaN	951	2876	3826
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3830	16.178	NaN	1298.9	30	0	500.19	0.106			+	-1	GSAMSRLTR	9	27	332.17413255419183	NaN	0	331.8393249511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_GSAM(Oxidation (M))SRLTR_	REV__ENSG00000164663|ENST00000682992|USP49;REV__nc|ENSG00000164663|Q70CQ1-2|USP49	14.137123925751023	0.3891339986947948	3				NaN	NaN	0	NaN	952	2876	3826
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3831	16.18	NaN	1246.2	30	0	219.51	0.106	+			24844	LKALAASK	8	38	401.26385609099594	800.5131592487919	2	401.262939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LKALAASK_	ENSG00000013619|ENST00000370401|MAMLD1;nc|ENSG00000013619|Q13495-3|MAMLD1;nc|ENSG00000013619|Q13495-4|MAMLD1	49.44154591367651	0.597725784090933	3				NaN	NaN	0	NaN	953	2876	3826
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3832	16.182	NaN	1820.3	30	0	363.3	0.106			+	1669	AGRKRQGPGP	10	48	512.2947916175955	NaN	0	512.7745971679688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AGRKRQGPGP_	REV__ENST00000398554.1_1_17:37778113-37778526:+|nuORF	32.75053402867276	0.3926392905881664	3				NaN	NaN	0	NaN	954	2876	3826
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3833	16.184	NaN	2963.3	30	0	722.41	0.034	+			5254	ATVDKTVCK	9	59	482.76107676560815	963.5076005980163	2	482.76031494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATVDKTVCK_	ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1670Tfs*23|1|0.29|ENSG00000174231|chr17:1659487-1659487|C/-|frameshift_variant	80.45461616416974	0.09558281504443908	3				NaN	NaN	0	NaN	955	2876	3826
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3840	16.2	NaN	5979.2	30	0	3961	0.214			+	32467	QVLSVLYVP	9	54	509.3017601580037	1016.5889673828074	2	509.3011779785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QVLSVLYVP_	REV__ENST00000293880.9_1_11:57100225-57103093:-|nuORF	47.657333605630114	0.33044192980041115	3				NaN	NaN	0	NaN	959	2879	3839
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3841	16.204	NaN	3464.6	30	0	612.09	0.106	+			20920	KIWNKSLVS	9	61	537.8184419487825	1073.622330964365	2	537.818115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KIWNKSLVS_	ENST00000439158.5_1_6:28295255-28297120:-|nuORF	51.19269402634007	0.2889735674168909	3				NaN	NaN	0	NaN	960	2879	3839
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3842	16.206	NaN	6235.9	30	0	1737	0.106	+			14528	GTDRKLSPLLS	11	40	396.2318765577343	1185.673800273403	3	396.56524658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTDRKLSPLLS_	ENSG00000160284|ENST00000291672|SPATC1L	55.08391021199286	0.3673379875553588	3				NaN	NaN	0	NaN	961	2879	3839
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3843	16.207	NaN	5283.9	30	0	910.14	0.106	+			48027	VSRKGSKDVV	10	43	358.88064708444085	1073.6201118535225	3	358.88055419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSRKGSKDVV_	ENSG00000138688|ENST00000679879|BLTP1;KIAA1109-FSIP2|1|fusion;nc|ENSG00000138688|Q2LD37-2|BLTP1;nc|ENSG00000138688|Q2LD37-4|BLTP1;nc|ENSG00000138688|Q2LD37-6|BLTP1;nc|ENSG00000138688|Q2LD37-7|BLTP1;nc|ENSG00000138688|Q2LD37|BLTP1	45.02220120713402	0.5028680121232791	3				NaN	NaN	0	NaN	962	2879	3839
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3844	16.209	NaN	2257.7	30	0	417.43	0.106	+			19860	KEEKKLKEVM	10	57	631.3621991150644	1260.7098452969287	2	631.3619995117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEEKKLKEVM_	ENSG00000113810|ENST00000357388|SMC4;ENST00000462668.5_1_3:160131924-160151594:+|nuORF;ENST00000493695.1_1_3:160132272-160134257:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4;SMC4|p.D465Efs*32|1|0.12|ENSG00000113810|chr3:160416372-160416373|-/GCATACATCTT|frameshift_variant;SMC4|p.K628Nfs*23|1|0.11|ENSG00000113810|chr3:160420762-160420762|A/-|frameshift_variant	49.44154591367651	0.46214596422418036	3				NaN	NaN	0	NaN	963	2879	3839
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3845	16.211	NaN	3764.9	30	0	632.27	0.106	+			22387	KTIGNVPI	8	59	421.2606622868692	NaN	0	421.2610168457031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KTIGNVPI_	ENSG00000112333|ENST00000368986|NR2E1;nc|ENSG00000112333|Q9Y466-2|NR2E1	42.47446043378293	1.7418937515398478	3				NaN	NaN	0	NaN	964	2879	3839
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3846	16.213	NaN	1299.6	30	0	114.18	0.034	+			16197	HEASGVTVK	9	49	464.2484400452938	NaN	0	464.2486877441406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HEASGVTVK_	ENSG00000128815|ENST00000325239|WDFY4;nc|ENSG00000128815|Q6ZS81-2|WDFY4;nc|ENSG00000128815|Q6ZS81-3|WDFY4;nc|ENSG00000128815|Q6ZS81-4|WDFY4;nc|ENSG00000128815|Q6ZS81-5|WDFY4;WDFY4|p.E2278Kfs*20|2|0.3|ENSG00000128815|chr10:48873577-48873577|G/-|frameshift_variant;WDFY4|p.L901Sfs*22|1|0.22|ENSG00000128815|chr10:48774601-48774601|C/-|frameshift_variant;WDFY4|p.Q1607Sfs*14|1|0.47|ENSG00000128815|chr10:48807934-48807934|C/-|frameshift_variant;WDFY4|p.R948Tfs*54|1|0.33|ENSG00000128815|chr10:48775775-48775776|-/CA|frameshift_variant	54.776311868738084	0.17377682019723872	3				NaN	NaN	0	NaN	965	2879	3839
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3851	16.228	NaN	3816.4	30	0	617.36	0.214			+	30479	QAERCVRLS	9	55	531.2792266886934	1060.5439004441866	2	531.2789306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QAERCVRLS_	REV__ENST00000474396.1_1_7:1094922-1095114:+|nuORF	64.20726635412375	0.17854274437659667	3				NaN	NaN	0	NaN	967	2882	3850
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3852	16.231	NaN	7706.3	30	0	1272.5	0.106	+			49877	VYTKKTTKL	9	63	361.225622594882	NaN	0	361.2254333496094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYTKKTTKL_	ENSG00000148396|ENST00000684901|SEC16A;nc|ENSG00000148396|O15027-2|SEC16A;nc|ENSG00000148396|O15027-3|SEC16A;nc|ENSG00000148396|O15027-4|SEC16A;nc|ENSG00000148396|O15027-5|SEC16A;SEC16A|p.P2155Hfs*25|1|0.25|ENSG00000148396|chr9:136447664-136447664|G/-|frameshift_variant	36.446750945000026	0.29355505452396785	3				NaN	NaN	0	NaN	968	2882	3850
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3853	16.233	NaN	1341.6	30	0	272.77	0.106			+	10308	ETQSLHTID	9	53	522.2552021876597	NaN	0	522.255126953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ETQSLHTID_	REV__ENSG00000112818|ENST00000230588|MEP1A	58.78195531508484	0.1545138866451181	3				NaN	NaN	0	NaN	969	2882	3850
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3854	16.235	NaN	2942.3	30	0	930.2	0.036	+			24428	LGASSLQGVMG	11	39	340.5101318359375	NaN	0	340.5101318359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LGASSLQGVMG_	ENST00000466542.6_1_1:161551173-161559386:+|nuORF;ENST00000480308.5_1_1:161633004-161643868:+|nuORF;ENST00000485778.1_1_1:161633004-161641486:+|nuORF;ENST00000496692.6_1_1:161551173-161559386:+|nuORF	27.882242232435846	0.44115667141176046	3				NaN	NaN	0	NaN	970	2882	3850
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3862	16.253	NaN	6467.3	30	0	1791.5	0.214				-1	TPCSKCCDSK	10	57	376.8213175138699	1127.4421231418096	3	376.82098388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_TPC(Carbamidomethyl (C))SKCCDSK_	ENST00000399543.1_1_5:43042205-43042844:+|nuORF	33.921630207806714	0.6028135429846169	3				NaN	NaN	0	NaN	975	2885	3861
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3863	16.257	NaN	4591	30	0	1615.3	0.106				-1	ARRAIEMAQ	9	40	354.5212409468459	NaN	0	354.5213928222656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_ARRAIEM(Oxidation (M))AQ_	BRSK2|p.P580Qfs*55|2|0.16|ENSG00000174672|chr11:1456410-1456410|G/-|frameshift_variant;ENSG00000174672|ENST00000528841|BRSK2;nc|ENSG00000174672|Q8IWQ3-2|BRSK2;nc|ENSG00000174672|Q8IWQ3-3|BRSK2;nc|ENSG00000174672|Q8IWQ3-4|BRSK2;nc|ENSG00000174672|Q8IWQ3-5|BRSK2;nc|ENSG00000174672|Q8IWQ3-6|BRSK2	32.81241826257853	0.3119040447479903	3				NaN	NaN	0	NaN	976	2885	3861
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3864	16.259	NaN	955.6	30	0	177.36	0.037			+	46161	VDVADSGTFCD	11	42	564.7284558885343	1127.4423588438685	2	564.7288208007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VDVADSGTFCD_	REV__ENSG00000166153|ENST00000550587|DEPDC4;REV__nc|ENSG00000166153|Q8N2C3|DEPDC4	23.52269567125451	0.7430573033454468	3				NaN	NaN	0	NaN	977	2885	3861
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3871	16.277	NaN	2029.1	30	0	439.27	0.214	+			48047	VSSCLMPFCP	10	47	578.7478491495737	NaN	0	578.747802734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_VSSC(Carbamidomethyl (C))LM(Oxidation (M))PFCP_	ENST00000436066.3_1_19:30166084-30166339:+|nuORF	40.77816245573522	0.36390427802201647	3				NaN	NaN	0	NaN	981	2888	3870
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3872	16.28	NaN	1395	30	0	150.39	0.106			+	7202	DAIKQNVQH	9	41	526.7789286639902	1051.5433043947803	2	527.2816162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DAIKQNVQH_	REV__ENSG00000184949|ENST00000535113|FAM227A	24.20275056022122	0.577060078256802	3				NaN	NaN	0	NaN	982	2888	3870
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3873	16.282	NaN	1639.5	30	0	260.35	0.106	+			39597	STHEKILEK	9	42	542.8052085132728	1083.5958640933454	2	542.8054809570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STHEKILEK_	ENSG00000101333|ENST00000378473|PLCB4;ENST00000464199.5_1_20:9351789-9459633:+|nuORF;ENST00000492632.5_1_20:9288449-9449247:+|nuORF;nc|ENSG00000101333|Q15147-2|PLCB4;nc|ENSG00000101333|Q15147-4|PLCB4;nc|ENSG00000101333|Q15147-5|PLCB4;nc|ENSG00000101333|Q15147|PLCB4	41.42661286455405	0.403525789677298	3				NaN	NaN	0	NaN	983	2888	3870
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3874	16.284	NaN	5439.5	30	0	1751.3	0.106	+			22663	KTYIPPKGETK	11	64	421.24347354378847	NaN	0	421.2432556152344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTYIPPKGETK_	ENSG00000189403|ENST00000341423|HMGB1;ENST00000559968.1_1_14:68082236-68082464:+|nuORF;nc|ENSG00000124097|B2RPK0|HMGB1P1	60.1669710687717	0.23124574974718506	3				NaN	NaN	0	NaN	984	2888	3870
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3875	16.286	NaN	1863.6	30	0	196.59	0.106	+			49719	VYMVTQGRK	9	45	361.19908378928903	NaN	0	361.1988220214844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VYMVTQGRK_	GRB7|p.V285M|1|0.36|ENSG00000141738|chr17:39744604-39744604|G/A|missense_variant	40.5726180659479	0.27166212580479165	3				NaN	NaN	0	NaN	985	2888	3870
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3876	16.287	NaN	1263.1	30	0	184.35	0.034			+	43560	THTSDIIGK	9	41	486.26185474105955	970.5091565489191	2	486.2626037597656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_THTSDIIGK_	REV__ENSG00000157087|ENST00000360273|ATP2B2;REV__nc|ENSG00000157087|Q01814-2|ATP2B2;REV__nc|ENSG00000157087|Q01814-3|ATP2B2;REV__nc|ENSG00000157087|Q01814-4|ATP2B2;REV__nc|ENSG00000157087|Q01814-5|ATP2B2;REV__nc|ENSG00000157087|Q01814-6|ATP2B2;REV__nc|ENSG00000157087|Q01814-7|ATP2B2;REV__nc|ENSG00000157087|Q01814-8|ATP2B2	35.61828744233558	0.47037581924408073	3				NaN	NaN	0	NaN	986	2888	3870
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3885	16.309	NaN	12656	30	0	8791	0.214			+	293	AAPEGLSRK	9	47	464.7640101816842	927.5134674301685	2	464.7642822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAPEGLSRK_	REV__ENSG00000178718|ENST00000322177|RPP25	40.77816245573522	0.41113185337114944	3				NaN	NaN	0	NaN	992	2891	3884
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3886	16.312	NaN	6850	30	0	839.75	0.106	+			35861	SEDKKRPSL	9	71	530.2941776739935	1058.573802414787	2	530.2943115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEDKKRPSL_	ENSG00000140682|ENST00000394863|TGFB1I1;ENST00000564176.5_1_16:31485144-31486093:+|nuORF;ENST00000567066.6_1_16:31483405-31488894:+|nuORF;ENST00000568142.2_1_16:31484766-31486093:+|nuORF;nc|ENSG00000140682|O43294-2|TGFB1I1	101.45984612302182	0.0377122763612125	3				NaN	NaN	0	NaN	993	2891	3884
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3887	16.314	NaN	4438.5	30	0	569.41	0.106	+			338	AAQAHTREL	9	53	498.76488415356226	NaN	0	498.7654724121094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AAQAHTREL_	ENSG00000103549|ENST00000324685|RNF40;ENST00000493683.5_1_16:30773821-30780773:+|nuORF;nc|ENSG00000103549|O75150-3|RNF40;nc|ENSG00000103549|O75150-4|RNF40	88.17693792209575	0.04527150213038833	3				NaN	NaN	0	NaN	994	2891	3884
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3888	16.316	NaN	2870.4	30	0	339.82	0.106	+			42652	TAVKHEQEY	9	61	552.7704945307877	NaN	0	552.7708129882812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TAVKHEQEY_	ENSG00000086598|ENST00000262225|TMED2	72.2432373244024	0.09796301979040985	3				NaN	NaN	0	NaN	995	2891	3884
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3889	16.318	NaN	2519.5	30	0	485.43	0.106	+			48639	VTSMSTQTK	9	48	491.747260356822	NaN	0	491.74755859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTSMSTQTK_	ENSG00000083937|ENST00000263780|CHMP2B;nc|ENSG00000083937|Q9UQN3-2|CHMP2B	80.45461616416974	0.0698259577396595	3				NaN	NaN	0	NaN	996	2891	3884
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3890	16.32	NaN	1790	30	0	201.71	0.106	+			23035	KVSYSHIQSK	10	65	588.8235692972478	1175.6325856612955	2	588.8235473632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KVSYSHIQSK_	ENSG00000047849|ENST00000683076|MAP4;nc|ENSG00000047849|P27816-2|MAP4;nc|ENSG00000047849|P27816-4|MAP4;nc|ENSG00000047849|P27816-6|MAP4;nc|ENSG00000047849|P27816|MAP4	107.45493779368988	0.05555770664244329	3				NaN	NaN	0	NaN	997	2891	3884
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3891	16.321	NaN	3337.1	30	0	860.53	0.035			+	173	AAKFQERF	8	31	332.8456390498515	NaN	0	332.8455810546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AAKFQERF_	REV__ENSG00000121764|ENST00000403528|HCRTR1	21.70233525837049	1.7418937515398478	3				NaN	NaN	0	NaN	998	2891	3884
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3899	16.339	NaN	1931.8	30	0	212.68	0.142	+			41877	SVTKTALNK	9	59	481.28776876187703	960.5609845905541	2	481.2867736816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVTKTALNK_	ENSG00000187164|ENST00000355371|SHTN1;nc|ENSG00000187164|A0MZ66-3|SHTN1;nc|ENSG00000187164|A0MZ66-4|SHTN1;nc|ENSG00000187164|A0MZ66-5|SHTN1;nc|ENSG00000187164|A0MZ66-6|SHTN1;nc|ENSG00000187164|A0MZ66-7|SHTN1;nc|ENSG00000187164|A0MZ66-8|SHTN1	77.31757898189308	0.1091473830098891	3				NaN	NaN	0	NaN	1003	2894	3898
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3906	16.358	NaN	3507.8	30	0	505.56	0.214	+			6913	CLWALNLAR	9	47	353.8647488316553	NaN	0	353.86468505859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CLWALNLAR_	ENSG00000139445|ENST00000299162|FOXN4;nc|ENSG00000139445|Q96NZ1-3|FOXN4	33.51558372728122	0.30835390848773375	3				NaN	NaN	0	NaN	1007	2897	3905
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3907	16.361	NaN	897.86	30	0	196.46	0.106			+	51041	YLAQSKEMQG	10	38	577.78125	NaN	0	577.78125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YLAQSKEMQG_	REV__ENSG00000153820|ENST00000392056|SPHKAP;REV__nc|ENSG00000153820|Q2M3C7-2|SPHKAP;REV__SPHKAP|p.D1487*|1|0.39|ENSG00000153820|chr2:227995684-227995685|-/A|frameshift_variant;REV__SPHKAP|p.P530Qfs*32|1|0.43|ENSG00000153820|chr2:228019265-228019265|G/-|frameshift_variant;REV__SPHKAP|p.S939Pfs*31|1|0.11|ENSG00000153820|chr2:228018039-228018039|A/-|frameshift_variant	29.170058357718403	0.40439580130713204	3				NaN	NaN	0	NaN	1008	2897	3905
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3908	16.363	NaN	1744.2	30	0	905.45	0.041			+	-1	SVMVINMRYLC	11	38	467.89650548729566	1400.667687062087	3	467.8963928222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_SVMVINM(Oxidation (M))RYLC(Carbamidomethyl (C))_	REV__ENST00000524549.1_1_11:9598759-9598837:+|nuORF	17.16674453292914	0.7901079503840427	3				NaN	NaN	0	NaN	1009	2897	3905
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3914	16.378	NaN	6508.3	30	0	1012.5	0.214	+			23008	KVSKELVEK	9	68	530.3244396141224	1058.6343262950447	2	530.3245239257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVSKELVEK_	ENSG00000125844|ENST00000377813|RRBP1;nc|ENSG00000125844|Q9P2E9-3|RRBP1;RRBP1|p.A628Gfs*69|1|0.35|ENSG00000125844|chr20:17621915-17621916|-/T|frameshift_variant	156.16072019525166	0.005433163824165674	3				NaN	NaN	0	NaN	1012	2900	3913
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3915	16.381	NaN	13120	30	0	1678.3	0.106	+			38870	SSNSYAIKK	9	67	499.26981597917614	996.5250790251523	2	499.26885986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSNSYAIKK_	ENSG00000083845|ENST00000196551|RPS5;ENST00000599232.1_1_19:58906030-58906114:+|nuORF	136.5150327860613	0.012115003498012726	3				NaN	NaN	0	NaN	1013	2900	3913
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3916	16.383	NaN	7333.2	30	0	1596.3	0.106	+			36664	SGMGSTVSK	9	63	427.2079241760782	852.4012954189565	2	427.2075500488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SGMGSTVSK_	ENSG00000132383|ENST00000254719|RPA1;RPA1|p.N274Mfs*5|1|0.18|ENSG00000132383|chr17:1879272-1879272|A/-|frameshift_variant	99.01295224348159	0.040209060045561164	3				NaN	NaN	0	NaN	1014	2900	3913
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3917	16.385	NaN	5186	30	0	1580.5	0.106	+			14507	GTDEHVVCK	9	65	494.23217857742407	986.4498042216482	2	494.23162841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTDEHVVCK_	nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM	134.81075121484326	0.012914550297035062	3				NaN	NaN	0	NaN	1015	2900	3913
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3918	16.387	NaN	4958.2	30	0	564.52	0.106	+			38411	SSAEYSVHK	9	70	504.24375917131556	1006.4729654094311	2	504.24346923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSAEYSVHK_	ENSG00000058085|ENST00000264144|LAMC2;LAMC2|p.V488Sfs*24|1|0.32|ENSG00000058085|chr1:183227688-183227688|G/-|frameshift_variant;nc|ENSG00000058085|Q13753-2|LAMC2	132.757866228626	0.013877640931359021	3				NaN	NaN	0	NaN	1016	2900	3913
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3919	16.389	NaN	1761.2	30	0	262.74	0.106			+	8897	EETTPRLR	8	62	501.2737639371718	NaN	0	501.3209228515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EETTPRLR_	REV__SPEG|p.A1845T|1|0.74|ENSG00000072195|chr2:219481648-219481648|G/A|missense_variant	60.97194046774394	1.7418937515398478	3				NaN	NaN	0	NaN	1017	2900	3913
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3920	16.391	NaN	944.99	30	0	253.9	0.035			+	24740	LHRLRPLP	8	29	334.54974365234375	NaN	0	334.54974365234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LHRLRPLP_	REV__ENST00000527348.1_1_11:65770323-65770707:+|nuORF;REV__ENST00000530204.1_1_11:65770323-65770533:+|nuORF	25.450171626174864	1.7418937515398478	3				NaN	NaN	0	NaN	1018	2900	3913
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3929	16.41	NaN	4538.9	30	0	363.24	0.214	+			39111	SSTDINVKK	9	64	496.2750209382529	990.5354889433058	2	496.2743835449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSTDINVKK_	ENSG00000164749|ENST00000396423|HNF4G;nc|ENSG00000164749|Q14541-2|HNF4G;nc|ENSG00000164749|Q14541|HNF4G	115.49404669440601	0.023927554121326553	3				NaN	NaN	0	NaN	1024	2903	3928
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3930	16.414	NaN	8804.5	30	0	1584.1	0.106	+			5537	AVAIKAMAK	9	63	459.7758873799143	917.5372218266286	2	459.7754821777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_AVAIKAM(Oxidation (M))AK_	EIF5A|p.A145P|1|0.15|ENSG00000132507|chr17:7311608-7311608|G/C|missense_variant;ENSG00000132507|ENST00000336458|EIF5A;ENSG00000253626|ENST00000520547|EIF5AL1;nc|ENSG00000132507|P63241-2|EIF5A	68.78682469695295	0.14603441672067394	3				NaN	NaN	0	NaN	1025	2903	3928
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3931	16.416	NaN	2078.2	30	0	301.16	0.106	+			38946	SSQQSVMSK	9	56	491.2377059614327	980.4608589896654	2	491.23681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSQQSVMSK_	ENSG00000173193|ENST00000474629|PARP14;nc|ENSG00000173193|Q460N5-1|PARP14;nc|ENSG00000173193|Q460N5-3|PARP14;nc|ENSG00000173193|Q460N5-4|PARP14;nc|ENSG00000173193|Q460N5-5|PARP14;PARP14|p.N1416Efs*19|1|0.2|ENSG00000173193|chr3:122718388-122718389|-/A|frameshift_variant	61.76455937419982	0.19890525308472518	3				NaN	NaN	0	NaN	1026	2903	3928
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3932	16.418	NaN	1660.6	30	0	334.71	0.106	+			32331	QTTLKNWK	8	48	509.78769324832314	NaN	0	509.7879638671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QTTLKNWK_	ENST00000540638.6_2_18:5433923-5434031:-|nuORF	42.86426827375447	1.7418937515398478	3				NaN	NaN	0	NaN	1027	2903	3928
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3933	16.42	NaN	2237.1	30	0	298.87	0.106	+			20157	KEKRPPQTL	9	61	548.8275558053944	1095.6405586775886	2	548.8278198242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEKRPPQTL_	ENSG00000173467|ENST00000310398|AGR3	82.83050618871818	0.08530945204495013	3				NaN	NaN	0	NaN	1028	2903	3928
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3934	16.421	NaN	1024.4	30	0	168.56	0.106	+			38000	SPLFPEMQS	9	24	518.2433779080387	1034.4722028828774	2	518.243408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SPLFPEMQS_	ENSG00000135763|ENST00000258243|URB2	15.641811463095205	0.6112419832031292	3				NaN	NaN	0	NaN	1029	2903	3928
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3935	16.423	NaN	1371.1	30	0	208.64	0.034			+	-1	GKDLPRDC	8	38	480.73189679103155	NaN	0	480.7312927246094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_GKDLPRDC(Carbamidomethyl (C))_	REV__ENST00000390599.2_14:106539218-106539278:-|nuORF	34.172542307311794	1.7418937515398478	3				NaN	NaN	0	NaN	1030	2903	3928
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3949	16.452	NaN	109330	30	0	22492	0.214	+			40223	STSENITQK	9	93	504.2546006346797	1006.4946483361595	2	504.25335693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STSENITQK_	DDX3Y|p.V655Gfs*2|1|0.09|ENSG00000067048|chrY:12918097-12918098|-/G|frameshift_variant;ENSG00000067048|ENST00000336079|DDX3Y;ENSG00000215301|ENST00000644876|DDX3X;nc|ENSG00000067048|O15523-2|DDX3Y;nc|ENSG00000215301|O00571-2|DDX3X	223.32071464388096	5.863022754720228E-10	3				NaN	NaN	0	NaN	1041	2906	3948
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3950	16.456	NaN	13986	30	0	2568.6	0.106	+			39671	STIGETSNR	9	65	482.7387376327324	963.4629223322648	2	482.7377014160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STIGETSNR_	ENST00000556687.5_1_14:23375339-23380602:-|nuORF;nc|ENSG00000100461|Q86U06-2|RBM23;nc|ENSG00000100461|Q86U06-4|RBM23	159.27591364854348	0.004707062175358555	3				NaN	NaN	0	NaN	1042	2906	3948
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3951	16.457	NaN	15424	30	0	9766.3	0.106	+			2284	ALYSGVHKK	9	43	334.86283927308205	1001.5666884194461	3	334.8624267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ALYSGVHKK_	ENSG00000111961|ENST00000367467|SASH1;SASH1|p.N810Tfs*48|1|0.29|ENSG00000111961|chr6:148543895-148543895|A/-|frameshift_variant	32.81241826257853	0.4965981579233955	3				NaN	NaN	0	NaN	1043	2906	3948
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3952	16.459	NaN	1625.5	30	0	324.11	0.106	+			16507	HEVDPVRRA	9	50	539.7918772621564	1077.5692015911127	2	539.7920532226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HEVDPVRRA_	ENSG00000118971|ENST00000261254|CCND2;nc|ENSG00000118971|P30279-2|CCND2	71.87747018426188	0.13267044672804276	3				NaN	NaN	0	NaN	1044	2906	3948
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3953	16.461	NaN	771.88	30	0	152.47	0.106			+	19204	KAAEGDLPR	9	39	478.7615335378012	NaN	0	478.7615966796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KAAEGDLPR_	REV__ENSG00000186862|ENST00000619208|PDZD7	47.657333605630114	0.2228375344433429	3				NaN	NaN	0	NaN	1045	2906	3948
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3954	16.463	NaN	443.92	30	0	69.777	0.036	+			20924	KIYYVFER	8	28	559.3031616210938	NaN	0	559.3031616210938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KIYYVFER_	ENSG00000164946|ENST00000380880|FREM1;ENST00000497634.2_1_9:14784366-14792866:-|nuORF;FREM1|p.Q1320K|1|0.44|ENSG00000164946|chr9:14792766-14792766|G/T|missense_variant;FREM1|p.T1560Qfs*46|1|0.35|ENSG00000164946|chr9:14775969-14775969|C/-|frameshift_variant	16.473147378115264	1.7418937515398478	3				NaN	NaN	0	NaN	1046	2906	3948
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3955	16.463	NaN	2290.5	30	0	606.64	0.145	+			20159	KEKRPPQTL	9	34	366.22089149364365	1095.640845081131	3	366.2204895019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KEKRPPQTL_	ENSG00000173467|ENST00000310398|AGR3	40.77816245573522	0.41113185337114944	3				NaN	NaN	0	NaN	1047	2906	3948
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3968	16.493	NaN	266520	30	0	28529	0.198			+	33704	RPEQLAAGV	9	123	470.7645550356654	939.5145571381308	2	470.7640686035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RPEQLAAGV_	REV__ENSG00000187714|ENST00000374115|SLC18A3;REV__SLC18A3|p.A20D|1|0.42|ENSG00000187714|chr10:49610799-49610799|C/A|missense_variant	93.19546047674547	0.05585629608842056	3				NaN	NaN	0	NaN	1057	2909	3967
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3969	16.496	NaN	28500	30	0	4251.7	0.106	+			9160	EGNTDLHEH	9	76	526.2259843634974	1050.4374157937948	2	526.2262573242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EGNTDLHEH_	ENST00000437864.1_1_9:100396806-100398280:-|nuORF	34.172542307311794	0.4838870758800184	3				NaN	NaN	0	NaN	1058	2909	3967
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3970	16.498	NaN	2467.5	30	0	653.17	0.106			+	12205	GARAAPLY	8	53	409.7302869527388	817.4460209722777	2	409.7297058105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GARAAPLY_	REV__ENSG00000138095|ENST00000260665|LRPPRC;REV__ENST00000447246.1_1_2:44222936-44223056:-|nuORF	37.028477286268924	0.6747514403204248	3				NaN	NaN	0	NaN	1059	2909	3967
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3971	16.5	NaN	7328.4	30	0	637.68	0.106				-1	 	0	67	444.76718424761395	887.5198155620279	2	444.7667236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1060	2909	3967
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3972	16.501	NaN	15561	30	0	1395.8	0.106			+	38437	SSALLNKH	8	71	435.2459629488168	868.4773729644336	2	435.24566650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSALLNKH_	REV__ENSG00000143207|ENST00000367669|COP1;REV__nc|ENSG00000143207|Q8NHY2-2|COP1;REV__nc|ENSG00000143207|Q8NHY2-3|COP1;REV__nc|ENSG00000143207|Q8NHY2-4|COP1	143.01937276914788	0.26921844304278314	3				NaN	NaN	0	NaN	1061	2909	3967
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3973	16.503	NaN	6416.7	30	0	829.94	0.106				-1	 	0	57	391.7301961182109	781.4458393032219	2	391.72967529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1062	2909	3967
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3974	16.505	NaN	569.22	30	0	150.77	0.037	+			4435	ATIKDGKSLTK	11	34	581.3460083007812	NaN	0	581.3460083007812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATIKDGKSLTK_	ENSG00000166411|ENST00000299518|IDH3A;nc|ENSG00000166411|P50213-2|IDH3A	43.5013094617712	0.3619947534282521	3				NaN	NaN	0	NaN	1063	2909	3967
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3986	16.53	NaN	81517	30	0	21250	0.214	+			20101	KEKKEEQVI	9	82	565.824519363691	1129.634485794182	2	565.824951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEKKEEQVI_	ENSG00000164587|ENST00000407193|RPS14;ENST00000519690.1_1_5:149827146-149827347:-|nuORF	187.50397467658743	0.0005427347354732084	3				NaN	NaN	0	NaN	1072	2912	3985
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3987	16.534	NaN	98598	30	0	26169	0.106				-1	 	0	70	377.5523731983536	1129.635290195261	3	377.5520935058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1073	2912	3985
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3988	16.536	NaN	5236.6	30	0	1561.9	0.106			+	9390	EKEKGLRK	8	53	494.3016442886638	986.5887356441276	2	494.3011169433594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EKEKGLRK_	REV__ENST00000336216.8_1_15:77713046-77713202:+|nuORF	58.78195531508484	0.5138399468736706	3				NaN	NaN	0	NaN	1074	2912	3985
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3989	16.537	NaN	4178.2	30	0	2287.5	0.106	+			49116	VVLLSSSE	8	45	417.2356713094352	832.4567896856704	2	417.23486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVLLSSSE_	ATP8A2|p.S260Kfs*8|1|0.35|ENSG00000132932|chr13:25542041-25542042|-/A|frameshift_variant;ENSG00000132932|ENST00000381655|ATP8A2;nc|ENSG00000132932|Q9NTI2-1|ATP8A2;nc|ENSG00000132932|Q9NTI2-3|ATP8A2	26.79610172149135	0.7524337208463756	3				NaN	NaN	0	NaN	1075	2912	3985
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3990	16.539	NaN	1873.1	30	0	162.57	0.106				-1	 	0	46	357.72245197081526	713.4303510084305	2	357.7221984863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1076	2912	3985
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3991	16.541	NaN	1690.4	30	0	215.94	0.033			+	2655	AQLSVPHQ	8	55	440.23809814453125	NaN	0	440.23809814453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AQLSVPHQ_	REV__ENST00000550265.5_1_12:53607169-53614138:-|nuORF;REV__nc|ENSG00000172819|P13631-4|RARG	51.33545320467046	1.7418937515398478	3				NaN	NaN	0	NaN	1077	2912	3985
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3992	16.542	NaN	935.8	30	0	62.353	0.137			+	46732	VGPPRAAP	8	39	382.7244440649575	NaN	0	382.7244567871094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VGPPRAAP_	REV__FNDC1|p.T1443Pfs*84|1|0.31|ENSG00000164694|chr6:159239657-159239657|A/-|frameshift_variant	23.036711822280957	1.7418937515398478	3				NaN	NaN	0	NaN	1078	2912	3985
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4005	16.571	NaN	2514.2	30	0	361.28	0.214	+			6382	AVVEKIHAK	9	61	497.8061012201575	993.597649507115	2	497.8055725097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVVEKIHAK_	ENSG00000172432|ENST00000307126|GTPBP2;nc|ENSG00000172432|Q9BX10-2|GTPBP2;nc|ENSG00000172432|Q9BX10-3|GTPBP2;nc|ENSG00000172432|Q9BX10-4|GTPBP2	131.61620852596164	0.014413238321579053	3				NaN	NaN	0	NaN	1088	2915	4004
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4006	16.574	NaN	1962.9	30	0	1033.4	0.106			+	25251	LNKKYERTF	9	37	400.22328220950726	1197.6480172287218	3	400.22265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LNKKYERTF_	REV__tr|U7T3R5|U7T3R5_FUSNUtRNApseudouridinesynthaseAOS=FusobacteriumnucleatumCTI-5OX=1316586GN=truAPE=3SV=1	35.15202426646627	0.4747332964206883	3				NaN	NaN	0	NaN	1089	2915	4004
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4007	16.576	NaN	1378.8	30	0	222.71	0.106	+			21156	KKTVSKALA	9	51	473.3079528808594	NaN	0	473.3079528808594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KKTVSKALA_	FAM133A|p.G54V|1|0.12|ENSG00000179083|chrX:93709580-93709580|G/T|missense_variant	53.351449002276354	0.18359631779194618	3				NaN	NaN	0	NaN	1090	2915	4004
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4008	16.578	NaN	3042.6	30	0	485.56	0.106			+	21723	KQKSDIYTI	9	56	548.3044844826816	1094.594416032163	2	548.3050537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KQKSDIYTI_	REV__ENSG00000169933|ENST00000675598|FRMPD4;REV__FRMPD4|p.A947Qfs*130|1|0.42|ENSG00000169933|chrX:12717658-12717658|C/-|frameshift_variant;REV__FRMPD4|p.C618Vfs*8|1|0.19|ENSG00000169933|chrX:12716306-12716306|C/-|frameshift_variant;REV__FRMPD4|p.K1053Dfs*26|1|0.08|ENSG00000169933|chrX:12717982-12717983|-/GACTT|frameshift_variant;REV__FRMPD4|p.L1210Pfs*39|1|0.05|ENSG00000169933|chrX:12718454-12718455|-/CT|frameshift_variant;REV__FRMPD4|p.S1105Vfs*3|1|0.29|ENSG00000169933|chrX:12718134-12718134|A/-|frameshift_variant;REV__nc|ENSG00000169933|Q14CM0|FRMPD4	51.33545320467046	0.2872990594074956	3				NaN	NaN	0	NaN	1091	2915	4004
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4009	16.58	NaN	1318.4	30	0	154.58	0.106	+			35439	SASDVMSHK	9	47	481.22481435164894	960.4350757700979	2	481.2234802246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SASDVMSHK_	ENSG00000156675|ENST00000330843|RAB11FIP1;nc|ENSG00000156675|Q6WKZ4-2|RAB11FIP1;nc|ENSG00000156675|Q6WKZ4-3|RAB11FIP1;RAB11FIP1|p.E639Rfs*27|1|0.12|ENSG00000156675|chr8:37872887-37872888|-/T|frameshift_variant;RAB11FIP1|p.Q714Tfs*22|1|0.3|ENSG00000156675|chr8:37872662-37872663|-/T|frameshift_variant	44.377184641726394	0.36891676396732553	3				NaN	NaN	0	NaN	1092	2915	4004
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4010	16.581	NaN	3464.1	30	0	1722	0.035			+	6405	AVVGRLVSPP	10	35	332.2061462402344	NaN	0	332.2061462402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AVVGRLVSPP_	REV__ENST00000272133.3_1_1:224804098-224804761:+|nuORF	37.81151784470057	0.3760215235790741	3				NaN	NaN	0	NaN	1093	2915	4004
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4011	16.582	NaN	929.96	30	0	101.82	0.139				-1	IVCTSFKK	8	39	491.77245142994093	NaN	0	491.77264404296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_IVC(Carbamidomethyl (C))TSFKK_	ENSG00000113593|ENST00000261308|PPWD1;ENST00000511334.1_1_5:64872783-64879053:+|nuORF;nc|ENSG00000113593|Q96BP3-2|PPWD1	26.79610172149135	1.7418937515398478	3				NaN	NaN	0	NaN	1094	2915	4004
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4017	16.598	NaN	1694	30	0	142.42	0.214			+	2362	ANARGELNLT	10	53	529.7834297968083	1057.5523066604164	2	529.2830200195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ANARGELNLT_	REV__ENSG00000108797|ENST00000264638|CNTNAP1	77.31757898189308	0.2175361111083648	3				NaN	NaN	0	NaN	1097	2918	4016
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4018	16.602	NaN	574.23	30	0	101	0.039	+			7578	DIKSRRMVTR	10	29	631.3621991150644	1260.7098452969287	2	631.3609619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DIKSRRMVTR_	L1MA1_dup2411|chrX:76191796-76193207:-|1.7892693935927455|0.4902543273978149|1.87|482.0|14|1|sense	26.69291269510374	0.6618461711292317	3				NaN	NaN	0	NaN	1098	2918	4016
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4025	16.618	NaN	4325.6	30	0	1984	0.214	+			14599	GTGASGSFK	9	44	406.20126003882416	810.3879671444483	2	406.20062255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTGASGSFK_	ENSG00000124575|ENST00000244534|H1-3;ENSG00000124610|ENST00000244573|H1-1;ENSG00000168298|ENST00000304218|H1-4;ENSG00000184357|ENST00000331442|H1-5;ENSG00000187475|ENST00000338379|H1-6;ENSG00000187837|ENST00000343677|H1-2	110.11987700582712	0.028875675806141952	3				NaN	NaN	0	NaN	1102	2921	4024
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4026	16.622	NaN	599.27	30	0	112.96	0.035				-1	MQLAVDVQI	9	28	516.7742919921875	NaN	0	516.7742919921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_M(Oxidation (M))QLAVDVQI_	ENSG00000108384|ENST00000337432|RAD51C;ENST00000475762.5_1_17:56772326-56801433:+|nuORF;ENST00000487921.5_1_17:56769962-56783250:+|nuORF	19.1035232394073	0.3723251548669699	3				NaN	NaN	0	NaN	1103	2921	4024
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4030	16.636	NaN	35159	30	0	10234	0.214	+			3027	ASFDKAKLKK	10	73	379.2328973428141	1134.6768626286423	3	379.2324523925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASFDKAKLKK_	ENSG00000034510|ENST00000233143|TMSB10	66.96192283764107	0.30252237217063654	3				NaN	NaN	0	NaN	1104	2924	4029
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4031	16.639	NaN	8357.6	30	0	2617.4	0.106	+			3028	ASFDKAKLKK	10	64	568.3454881559117	1134.6764233786232	2	568.3458251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASFDKAKLKK_	ENSG00000034510|ENST00000233143|TMSB10	125.68205650279488	0.01930466848182481	3				NaN	NaN	0	NaN	1105	2924	4029
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4032	16.641	NaN	1144.6	30	0	129.95	0.106	+			20075	KEKGKISSL	9	44	495.30366687974004	988.5927808262801	2	495.3033142089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEKGKISSL_	ENSG00000131558|ENST00000253861|EXOC4;ENST00000462055.5_1_7:132937857-133164897:+|nuORF;ENST00000486013.5_1_7:132937857-133314895:+|nuORF;EXOC4|p.N439Ifs*15|1|0.39|ENSG00000131558|chr7:133475456-133475456|A/-|frameshift_variant;EXOC4|p.N439Kfs*28|1|0.17|ENSG00000131558|chr7:133475455-133475456|-/A|frameshift_variant;nc|ENSG00000131558|Q96A65-2|EXOC4	56.43379154798735	0.2433427591689151	3				NaN	NaN	0	NaN	1106	2924	4029
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4033	16.643	NaN	1299.7	30	0	665.56	0.035			+	21892	KRQWTTSK	8	46	517.7909148564966	1033.567276779793	2	517.7889404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KRQWTTSK_	REV__ENST00000473587.1_1_3:39172463-39175709:+|nuORF	42.86426827375447	0.638539151166014	3				NaN	NaN	0	NaN	1107	2924	4029
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4040	16.659	NaN	2133.5	30	0	428.76	0.214	+			5041	ATSGGSAEQIK	11	47	524.7673135626849	1047.5200741921697	2	524.7675170898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSGGSAEQIK_	ENSG00000114030|ENST00000344337|KPNA1	38.714083909724	0.5755383074156426	3				NaN	NaN	0	NaN	1111	2927	4039
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4041	16.663	NaN	1176.1	30	0	204.38	0.106	+			39973	STMKTMEDK	9	44	535.7465595005277	1069.4785660678554	2	535.7468872070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STMKTMEDK_	EAPP|p.F278Sfs*4|1|0.34|ENSG00000129518|chr14:34516335-34516335|A/-|frameshift_variant;ENSG00000129518|ENST00000250454|EAPP;ENST00000555683.1_1_14:35005207-35008876:-|nuORF	53.08895987439943	0.27122541748218487	3				NaN	NaN	0	NaN	1112	2927	4039
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4042	16.665	NaN	2620.3	30	0	649.17	0.106				-1	KKQVLTLCK	9	44	373.2295009786525	1116.6666735361575	3	373.563232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_KKQVLTLC(Carbamidomethyl (C))K_	ENST00000436852.2_1_X:121673097-121673310:+|nuORF	30.317721548370564	0.5199124245378496	3				NaN	NaN	0	NaN	1113	2927	4039
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4043	16.667	NaN	1183.2	30	0	387.09	0.106				-1	LLWCCKEEAE	10	30	669.295429648664	1336.576306364128	2	669.2944946289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_LLWC(Carbamidomethyl (C))C(Carbamidomethyl (C))KEEAE_	ENST00000404977.6_1_1:204889771-204889855:+|nuORF	11.511019455917149	0.7579564031639042	3				NaN	NaN	0	NaN	1114	2927	4039
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4044	16.668	NaN	1084.1	30	0	107.4	0.036				-1	SQCMPLKLR	9	43	546.2883911132812	NaN	0	546.2883911132812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_SQCM(Oxidation (M))PLKLR_	ENSG00000105722|ENST00000222329|ERF;ERF|p.L525Sfs*6|3|0.27|ENSG00000105722|chr19:42248543-42248543|C/-|frameshift_variant;nc|ENSG00000105722|P50548-2|ERF	24.20275056022122	0.35506675290109213	3				NaN	NaN	0	NaN	1115	2927	4039
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4052	16.688	NaN	1057.9	30	0	153.28	0.214				-1	TERQKVHCL	9	40	585.8060645562513	NaN	0	585.8057861328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_TERQKVHC(Carbamidomethyl (C))L_	ENSG00000110367|ENST00000534980|DDX6	34.172542307311794	0.30503706118289736	3				NaN	NaN	0	NaN	1120	2930	4051
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4053	16.692	NaN	2537.3	30	0	402.61	0.106			+	16632	HHGPRHLL	8	67	483.77239427712436	965.5302356210487	2	483.77142333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HHGPRHLL_	REV__TRIM49C|p.L17Pfs*38|1|0.13|ENSG00000204449|chr11:90035255-90035256|-/C|frameshift_variant	37.15910966729921	0.6739408393984688	3				NaN	NaN	0	NaN	1121	2930	4051
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4054	16.694	NaN	1339.8	30	0	234.3	0.034			+	21317	KLTGLLSGQ	9	46	458.7763420150388	NaN	0	458.77667236328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KLTGLLSGQ_	REV__ENSG00000186871|ENST00000334463|ERCC6L	30.317721548370564	0.32449924987115025	3				NaN	NaN	0	NaN	1122	2930	4051
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4061	16.71	NaN	7198.2	30	0	1236.7	0.214	+			45686	VAAEKSFNK	9	69	497.2722254347526	992.5298979363052	2	497.2717590332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VAAEKSFNK_	ENSG00000086589|ENST00000199814|RBM22;ENST00000520132.1_1_5:150071315-150073858:-|nuORF;nc|ENSG00000086589|Q9NW64-2|RBM22	136.26810882979174	0.012230845423532208	3				NaN	NaN	0	NaN	1126	2933	4060
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4062	16.713	NaN	2187.7	30	0	175.46	0.106			+	28400	NEQARLTNI	9	64	529.7834297968083	1057.5523066604164	2	529.7839965820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NEQARLTNI_	REV__RGPD4|p.K568Nfs*33|1|0.14|ENSG00000196862|chr2:107859787-107859787|A/-|frameshift_variant	49.536043120802724	0.308405419312776	3				NaN	NaN	0	NaN	1127	2933	4060
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4063	16.715	NaN	2477.7	30	0	230.79	0.036	+			41419	SVNERIENK	9	70	544.7880134366119	1087.5614739400237	2	544.7887573242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVNERIENK_	ENSG00000114054|ENST00000251654|PCCB;nc|ENSG00000114054|P05166-2|PCCB;PCCB|p.A153Lfs*3|1|0.38|ENSG00000114054|chr3:136261975-136261975|G/-|frameshift_variant	63.53385203322761	0.18415635464017938	3				NaN	NaN	0	NaN	1128	2933	4060
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4067	16.729	NaN	5692.4	30	0	1823.5	0.214	+			22790	KVFGGTVHK	9	58	486.78531148079696	971.556070028394	2	486.784423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVFGGTVHK_	ENSG00000163655|ENST00000496455|GMPS;GMPS|p.S473Lfs*26|1|0.37|ENSG00000163655|chr3:155922281-155922281|T/-|frameshift_variant;nc|ENSG00000163655|P49915-2|GMPS	93.1432384553994	0.056003526918089595	3				NaN	NaN	0	NaN	1129	2936	4066
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4068	16.733	NaN	8883	30	0	4573	0.106	+			22791	KVFGGTVHK	9	58	324.85919148670865	971.555745060326	3	324.85888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVFGGTVHK_	ENSG00000163655|ENST00000496455|GMPS;GMPS|p.S473Lfs*26|1|0.37|ENSG00000163655|chr3:155922281-155922281|T/-|frameshift_variant;nc|ENSG00000163655|P49915-2|GMPS	65.46538089061403	0.16805504838372562	3				NaN	NaN	0	NaN	1130	2936	4066
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4069	16.735	NaN	7279.6	30	0	2694.5	0.106			+	45857	VALNQPPGPT	10	52	331.8504023935553	992.5293777808661	3	331.8501892089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VALNQPPGPT_	REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-10|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-13|TTN;REV__nc|ENSG00000155657|Q8WZ42-2|TTN;REV__nc|ENSG00000155657|Q8WZ42-3|TTN;REV__nc|ENSG00000155657|Q8WZ42-4|TTN;REV__nc|ENSG00000155657|Q8WZ42-5|TTN;REV__nc|ENSG00000155657|Q8WZ42-7|TTN;REV__nc|ENSG00000155657|Q8WZ42-8|TTN;REV__nc|ENSG00000155657|Q8WZ42-9|TTN;REV__nc|ENSG00000155657|Q8WZ42|TTN;REV__TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;REV__TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;REV__TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;REV__TTN|p.K26626Nfs*34|1|0.34|ENSG00000155657|chr2:178561331-178561331|T/-|frameshift_variant;REV__TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;REV__TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;REV__TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant;REV__TTN|p.V27442Cfs*4|1|0.05|ENSG00000155657|chr2:178558107-178558108|-/A|frameshift_variant	20.94693142431847	0.7087701759873708	3				NaN	NaN	0	NaN	1131	2936	4066
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4070	16.737	NaN	4933.2	30	0	1331.3	0.106	+			32963	REDNQTNRL	9	67	573.2867453451537	1144.5589377571073	2	573.2861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_REDNQTNRL_	ENSG00000087460|ENST00000371085|GNAS;ENST00000313949.11_1_20:57415898-57485881:+|nuORF;ENST00000371075.7_3_20:57415898-57485881:+|nuORF;ENST00000476196.5_1_20:57478538-57485881:+|nuORF;ENST00000477931.5_1_20:57464155-57485881:+|nuORF;ENST00000480975.5_1_20:57464272-57485881:+|nuORF;ENST00000496934.5_1_20:57473969-57485881:+|nuORF;nc|ENSG00000087460|P63092-2|GNAS;nc|ENSG00000087460|P63092-3|GNAS;nc|ENSG00000087460|P63092-4|GNAS;nc|ENSG00000087460|Q5JWF2-2|GNAS;nc|ENSG00000087460|Q5JWF2|GNAS	76.16968421966216	0.11411088698345859	3				NaN	NaN	0	NaN	1132	2936	4066
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4071	16.738	NaN	1339.5	30	0	111.67	0.106	+			22713	KVAPAPAVVKK	11	49	554.3663938154102	1106.7182346976203	2	554.36669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KVAPAPAVVKK_	ENSG00000148303|ENST00000323345|RPL7A;ENST00000424041.1_1_20:36073469-36073910:-|nuORF;ENST00000463740.5_1_9:136215098-136217195:+|nuORF	66.9202029811203	0.26168278700588427	3				NaN	NaN	0	NaN	1133	2936	4066
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4072	16.74	NaN	1191.6	30	0	160	0.036	+			37645	SLQNLKVGAQ	10	56	529.3038752908889	1056.5931976485776	2	529.30517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLQNLKVGAQ_	ENSG00000142606|ENST00000378412|MMEL1;nc|ENSG00000142606|Q495T6-2|MMEL1;nc|ENSG00000142606|Q495T6-3|MMEL1	29.170058357718403	0.6416167986984785	3				NaN	NaN	0	NaN	1134	2936	4066
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4078	16.756	NaN	2717.1	30	0	395.61	0.214			+	21733	KQLNCVAVA	9	55	501.77548566918176	1001.5364184051635	2	502.27447509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_KQLNC(Carbamidomethyl (C))VAVA_	REV__ENSG00000185621|ENST00000420910|LMLN;REV__nc|ENSG00000185621|Q96KR4-2|LMLN;REV__nc|ENSG00000185621|Q96KR4|LMLN	47.91560031466742	0.327412564698279	3				NaN	NaN	0	NaN	1137	2939	4077
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4079	16.76	NaN	3663.8	30	0	1007.1	0.106	+			14629	GTGNMEIKK	9	55	489.2580442359377	976.5015355386754	2	489.25750732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTGNMEIKK_	ENSG00000138496|ENST00000682323|PARP9;nc|ENSG00000138496|Q8IXQ6-3|PARP9;nc|ENSG00000138496|Q8IXQ6|PARP9;PARP9|p.T633Pfs*5|2|0.22|ENSG00000138496|chr3:122537047-122537047|T/-|frameshift_variant	109.43880257439609	0.029570636687953285	3				NaN	NaN	0	NaN	1138	2939	4077
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4080	16.762	NaN	1555.2	30	0	334.59	0.106	+			35238	SALGAPSKS	9	36	409.22479838030097	816.435043827402	2	409.22393798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SALGAPSKS_	ENSG00000089225|ENST00000405440|TBX5;nc|ENSG00000089225|Q99593-2|TBX5;TBX5|p.E486*|1|0.4|ENSG00000089225|chr12:114355634-114355635|-/G|frameshift_variant	62.107414245175825	0.1960472003779324	3				NaN	NaN	0	NaN	1139	2939	4077
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4081	16.764	NaN	1952.9	30	0	322.3	0.106	+			2211	ALQFPEKP	8	46	465.2566549872794	928.4987570413588	2	465.256591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ALQFPEKP_	ENSG00000154252|ENST00000192314|GAL3ST2	55.50420428727701	0.5462892107279674	3				NaN	NaN	0	NaN	1140	2939	4077
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4082	16.765	NaN	1038.4	30	0	112.35	0.106	+			38836	SSNINPLGVP	10	47	499.26981597917614	996.5250790251523	2	499.2701416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSNINPLGVP_	tr|U7SU52|U7SU52_FUSNUThreonine-phosphatedecarboxylaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01024PE=4SV=1	35.15202426646627	0.5927656479315102	3				NaN	NaN	0	NaN	1141	2939	4077
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4083	16.767	NaN	4146.8	30	0	1075.5	0.037	+			22714	KVAPAPAVVKK	11	46	369.9135709320175	1106.7188833962525	3	369.9130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KVAPAPAVVKK_	ENSG00000148303|ENST00000323345|RPL7A;ENST00000424041.1_1_20:36073469-36073910:-|nuORF;ENST00000463740.5_1_9:136215098-136217195:+|nuORF	112.2953585152457	0.03526820493220478	3				NaN	NaN	0	NaN	1142	2939	4077
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4087	16.781	NaN	2565.9	30	0	522.32	0.214				-1	STCDHGIVAK	10	57	544.2638256442447	1086.5130983552892	2	544.2640991210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_STC(Carbamidomethyl (C))DHGIVAK_	ENSG00000130826|ENST00000369550|DKC1;nc|ENSG00000130826|O60832-2|DKC1	56.43379154798735	0.3982744522255666	3				NaN	NaN	0	NaN	1143	2942	4086
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4088	16.785	NaN	7121.3	30	0	3747	0.106	+			8704	EECDKAFYRFS	11	49	697.8066134355943	1393.5986739379885	2	697.8055419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EECDKAFYRFS_	ZNF100|p.G379D|1|0.04|ENSG00000197020|chr19:21727176-21727176|C/T|missense_variant	32.75053402867276	0.6462648045997152	3				NaN	NaN	0	NaN	1144	2942	4086
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4089	16.787	NaN	4695	30	0	1963	0.106	+			26647	LVDWLLEHC	9	40	376.5233800688973	1126.548310806892	3	376.5230407714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LVDWLLEHC_	ENSG00000136237|ENST00000665637|RAPGEF5	26.69291269510374	0.5537881896960711	3				NaN	NaN	0	NaN	1145	2942	4086
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4090	16.789	NaN	1104.8	30	0	182.09	0.106			+	592	ADLLEQVR	8	42	472.26467440265	942.5147958721	2	472.26385498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ADLLEQVR_	REV__ENSG00000148356|ENST00000300417|LRSAM1;REV__ENST00000483302.5_1_9:130248105-130265175:+|nuORF;REV__nc|ENSG00000148356|Q6UWE0-2|LRSAM1;REV__nc|ENSG00000148356|Q6UWE0-3|LRSAM1	45.9519527083369	0.6193794311207887	3				NaN	NaN	0	NaN	1146	2942	4086
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4091	16.79	NaN	1032	30	0	126.52	0.106	+			49382	VVSVVKKAG	9	45	443.7894592285156	NaN	0	443.7894592285156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVSVVKKAG_	BRCA2|p.T3085A|1|0.24|ENSG00000139618|chr13:32380142-32380142|A/G|missense_variant	31.954861631926434	0.3162336699109506	3				NaN	NaN	0	NaN	1147	2942	4086
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4092	16.792	NaN	2339.6	30	0	347.49	0.106	+			38638	SSHVPIQK	8	53	448.253620998472	894.492689063744	2	448.2532958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSHVPIQK_	ENSG00000158290|ENST00000371322|CUL4B;nc|ENSG00000158290|Q13620|CUL4B	60.97194046774394	0.49215940876911696	3				NaN	NaN	0	NaN	1148	2942	4086
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4093	16.794	NaN	774.34	30	0	146.36	0.036	+			20158	KEKRPPQTL	9	42	548.8275558053944	1095.6405586775886	2	548.8275146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KEKRPPQTL_	ENSG00000173467|ENST00000310398|AGR3	35.17822180527639	0.47448846649768284	3				NaN	NaN	0	NaN	1149	2942	4086
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4102	16.814	NaN	6167.6	30	0	888.75	0.214	+			19234	KAANRWKE	8	68	501.77548566918176	1001.5364184051635	2	501.7772521972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAANRWKE_	ENSG00000151466|ENST00000281142|SCLT1;ENST00000502495.1_1_4:129805634-129873545:-|nuORF	45.9519527083369	0.6193794311207887	3				NaN	NaN	0	NaN	1155	2945	4101
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4103	16.817	NaN	9474.6	30	0	1762.2	0.106	+			3492	ASSHVPIQK	9	51	322.85063344913806	965.5300709476141	3	322.8503112792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASSHVPIQK_	ENSG00000158290|ENST00000371322|CUL4B;nc|ENSG00000158290|Q13620|CUL4B	60.11826168202944	0.21262886028301267	3				NaN	NaN	0	NaN	1156	2945	4101
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4104	16.819	NaN	2523.2	30	0	264.29	0.106	+			37007	SIQDKGSIQK	10	72	552.3054688632774	1102.5963847933547	2	552.3067016601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SIQDKGSIQK_	ENSG00000106348|ENST00000338791|IMPDH1;ENST00000469328.5_1_7:128033063-128040541:-|nuORF;ENST00000484496.5_1_7:128032984-128040541:-|nuORF;nc|ENSG00000106348|P20839-2|IMPDH1;nc|ENSG00000106348|P20839-3|IMPDH1;nc|ENSG00000106348|P20839-4|IMPDH1;nc|ENSG00000106348|P20839-5|IMPDH1;nc|ENSG00000106348|P20839-7|IMPDH1;nc|ENSG00000106348|P20839|IMPDH1	128.3478880297481	0.01553957493207534	3				NaN	NaN	0	NaN	1157	2945	4101
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4105	16.821	NaN	692.12	30	0	160.42	0.106			+	20087	KEKHGFQR	8	33	515.283794437789	1028.5530359423778	2	515.2831420898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEKHGFQR_	REV__ENST00000526682.5_1_11:36398008-36415533:+|nuORF	35.61828744233558	0.6843154725607303	3				NaN	NaN	0	NaN	1158	2945	4101
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4106	16.823	NaN	708.63	30	0	146.37	0.106				-1	STCDKSFCR	9	28	580.7451171875	NaN	0	580.7451171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C)	_STC(Carbamidomethyl (C))DKSFC(Carbamidomethyl (C))R_	ENSG00000181472|ENST00000325144|ZBTB2;ZBTB2|p.F476Lfs*3|1|0.24|ENSG00000181472|chr6:151365638-151365638|A/-|frameshift_variant	14.137123925751023	0.3891339986947948	3				NaN	NaN	0	NaN	1159	2945	4101
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4107	16.825	NaN	1804.5	30	0	244.98	0.106	+			40224	STSENITQK	9	58	504.2546006346797	1006.4946483361595	2	504.2537536621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STSENITQK_	DDX3Y|p.V655Gfs*2|1|0.09|ENSG00000067048|chrY:12918097-12918098|-/G|frameshift_variant;ENSG00000067048|ENST00000336079|DDX3Y;ENSG00000215301|ENST00000644876|DDX3X;nc|ENSG00000067048|O15523-2|DDX3Y;nc|ENSG00000215301|O00571-2|DDX3X	51.52775601994872	0.28504342437107444	3				NaN	NaN	0	NaN	1160	2945	4101
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4108	16.827	NaN	547.53	30	0	97.603	0.033			+	-1	VMCMYFMVVR	10	37	451.2041320800781	NaN	0	451.2041320800781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C),Oxidation (M)	_VMC(Carbamidomethyl (C))MYFM(Oxidation (M))VVR_	REV__ENST00000313349.3_1_2:64861977-64862394:-|nuORF	36.446750945000026	0.3805027428805705	3				NaN	NaN	0	NaN	1161	2945	4101
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4113	16.841	NaN	3162.7	30	0	612.17	0.214	+			22379	KTIDRLAGK	9	55	501.3091125191409	1000.6036721050818	2	501.3088073730469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTIDRLAGK_	nc|ENSG00000211895|P01876-1|IGHA1	65.2775769800794	0.16962058972581526	3				NaN	NaN	0	NaN	1163	2948	4112
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4114	16.844	NaN	1382.7	30	0	176.78	0.106			+	31912	QQLDPLRA	8	47	470.7645550356654	939.5145571381308	2	470.76397705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QQLDPLRA_	REV__ENST00000601673.1_7:6523004-6523760:+|nuORF	30.503639358989545	0.7238069182250283	3				NaN	NaN	0	NaN	1164	2948	4112
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4115	16.846	NaN	2543.8	30	0	391.89	0.033	+			14003	GSEGPSYAK	9	54	448.2120350282131	894.4095171232262	2	448.21160888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GSEGPSYAK_	ENSG00000105197|ENST00000607714|TIMM50;ENST00000595286.1_1_19:39971511-39973801:+|nuORF;ENST00000598125.5_1_19:39971493-39973604:+|nuORF;nc|ENSG00000105197|Q3ZCQ8-2|TIMM50;TIMM50|p.H211Mfs*21|1|0.44|ENSG00000105197|chr19:39486426-39486426|C/-|frameshift_variant	60.11826168202944	0.21262886028301267	3				NaN	NaN	0	NaN	1165	2948	4112
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4121	16.861	NaN	1526.2	30	0	152.88	0.214	+			10762	FAGAKGGG	8	40	332.6745896581689	663.3346263831378	2	332.6742858886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FAGAKGGG_	ENST00000424404.1_1_7:121947107-121947290:+|nuORF	4.6817480819748125	0.7764044737779935	3				NaN	NaN	0	NaN	1168	2951	4120
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4122	16.864	NaN	3081	30	0	997.37	0.037			+	31266	QHRTKMYNV	9	55	588.8000406359201	1175.5855283386402	2	589.3003540039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QHRTKMYNV_	REV__ENSG00000197265|ENST00000355904|GTF2E2	37.15910966729921	0.4535818937225704	3				NaN	NaN	0	NaN	1169	2951	4120
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4130	16.884	NaN	3418.2	30	0	684.19	0.215	+			6064	AVMPPGRSR	9	63	485.76648607057336	969.5184192079467	2	485.7662353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVMPPGRSR_	ENSG00000131037|ENST00000201647|EPS8L1;EPS8L1|p.D510Efs*3|1|0.38|ENSG00000131037|chr19:55086071-55086072|AC/-|frameshift_variant;EPS8L1|p.G206Afs*54|1|0.23|ENSG00000131037|chr19:55081330-55081336|GCGGGGC/-|frameshift_variant;nc|ENSG00000131037|Q8TE68-3|EPS8L1	37.15910966729921	0.4535818937225704	3				NaN	NaN	0	NaN	1174	2954	4129
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4131	16.888	NaN	3584.5	30	0	1293.1	0.106	+			38479	SSATETINK	9	64	475.7438346063446	949.4731162794892	2	475.7421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSATETINK_	ENSG00000096696|ENST00000379802|DSP	120.8684288430529	0.02067403653475984	3				NaN	NaN	0	NaN	1175	2954	4129
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4132	16.89	NaN	3945.6	30	0	732.86	0.106			+	-1	TKECVPSN	8	60	467.7190589721388	933.4235650110776	2	467.71807861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_TKEC(Carbamidomethyl (C))VPSN_	REV__ENSG00000083857|ENST00000441802|FAT1;REV__FAT1|p.N3847Yfs*7|1|0.03|ENSG00000083857|chr4:186601370-186601371|-/TTATA|frameshift_variant;REV__FAT1|p.P3228Lfs*42|1|0.27|ENSG00000083857|chr4:186611556-186611556|G/-|frameshift_variant;REV__FAT1|p.P4313Lfs*36|1|0.34|ENSG00000083857|chr4:186596602-186596602|G/-|frameshift_variant	42.396135135203025	0.6414440140393314	3				NaN	NaN	0	NaN	1176	2954	4129
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4133	16.891	NaN	1495.4	30	0	323.41	0.037	+			20102	KEKKEEQVI	9	44	565.824519363691	1129.634485794182	2	565.8250732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEKKEEQVI_	ENSG00000164587|ENST00000407193|RPS14;ENST00000519690.1_1_5:149827146-149827347:-|nuORF	61.691277971877994	0.19951612995419254	3				NaN	NaN	0	NaN	1177	2954	4129
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4138	16.906	NaN	3029.5	30	0	464.97	0.214	+			42484	TANDANTKY	9	65	499.23377631163123	996.4529996900625	2	499.2333679199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TANDANTKY_	ENSG00000149182|ENST00000524782|ARFGAP2;ENST00000395449.7_1_11:47187835-47198404:-|nuORF;ENST00000524727.5_1_11:47194869-47198404:-|nuORF;ENST00000527097.5_1_11:47193699-47198404:-|nuORF;nc|ENSG00000149182|Q8N6H7-2|ARFGAP2	104.42354056486148	0.0346881550498418	3				NaN	NaN	0	NaN	1179	2957	4137
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4139	16.91	NaN	3334.4	30	0	364.14	0.106	+			8025	DTQKDISRV	9	63	531.283615489271	1060.552678045342	2	531.2839965820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DTQKDISRV_	ENSG00000188738|ENST00000424728|FSIP2;FSIP2|p.D5579Mfs*10|1|0.09|ENSG00000188738|chr2:185806029-185806029|A/-|frameshift_variant;FSIP2|p.K6152Rfs*27|1|0.43|ENSG00000188738|chr2:185807758-185807758|A/-|frameshift_variant;FSIP2|p.K6528Nfs*5|1|0.33|ENSG00000188738|chr2:185808884-185808884|A/-|frameshift_variant;FSIP2|p.V5734Yfs*24|2|0.23|ENSG00000188738|chr2:185806499-185806499|A/-|frameshift_variant;FSIP2|p.V6322*|1|0.42|ENSG00000188738|chr2:185808265-185808265|A/-|frameshift_variant	69.6276240434122	0.14239879520340665	3				NaN	NaN	0	NaN	1180	2957	4137
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4140	16.911	NaN	3214.5	30	0	560.48	0.106	+			45017	TVFKNGKVTK	10	72	561.33855752801	1120.66256212282	2	561.33837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVFKNGKVTK_	ENSG00000105835|ENST00000222553|NAMPT;ENST00000440465.1_1_10:36811746-36813066:-|nuORF	114.85826248499774	0.03459167991829056	3				NaN	NaN	0	NaN	1181	2957	4137
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4141	16.913	NaN	3672	30	0	1579.5	0.106				-1	 	0	42	417.240748702461	832.4669444717221	2	417.24017333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1182	2957	4137
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4142	16.915	NaN	3351.5	30	0	622.13	0.106	+			4575	ATLEQAHQAL	10	58	541.2864769367233	1080.5584009402464	2	541.2868041992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATLEQAHQAL_	ENSG00000164116|ENST00000506455|GUCY1A1;nc|ENSG00000164116|Q02108-2|GUCY1A1	59.93077597824379	0.36646980200755325	3				NaN	NaN	0	NaN	1183	2957	4137
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4143	16.917	NaN	1829.8	30	0	269.21	0.032				-1	 	0	48	400.713933644444	799.413314355688	2	400.71380615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1184	2957	4137
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4150	16.933	NaN	1289.7	30	0	185.46	0.142	+			32390	QVCKAHND	8	45	457.7085608097935	NaN	0	457.70831298828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QVCKAHND_	ENSG00000141013|ENST00000268699|GAS8;ENST00000564789.5_1_16:90106452-90109750:+|nuORF;ENST00000568284.1_1_16:90108802-90109750:+|nuORF;ENST00000569558.5_1_16:90103573-90109750:+|nuORF;nc|ENSG00000141013|O95995-2|GAS8	38.80614096846853	1.7418937515398478	3				NaN	NaN	0	NaN	1188	2960	4149
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4154	16.949	NaN	3034.2	30	0	339.97	0.214	+			20135	KEKNIEKLE	9	63	565.824519363691	1129.634485794182	2	565.8246459960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEKNIEKLE_	tr|U7T3F6|U7T3F6_FUSNURNAmethyltransferase,TrmHfamily,group3OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00624PE=4SV=1	66.9202029811203	0.15592758990009112	3				NaN	NaN	0	NaN	1189	2963	4153
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4155	16.953	NaN	3279.7	30	0	695.66	0.106				-1	QSCVRVGRSQ	10	42	392.86918998060116	1175.5857405420036	3	392.86871337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_QSC(Carbamidomethyl (C))VRVGRSQ_	ENST00000460895.5_1_3:134498709-134670235:+|nuORF;ENST00000473867.5_3_3:134560356-134670235:+|nuORF;ENST00000474732.1_2_3:134571358-134670235:+|nuORF;ENST00000497173.5_3_3:134515011-134670235:+|nuORF	24.231819034082204	0.6819444564287812	3				NaN	NaN	0	NaN	1190	2963	4153
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4156	16.954	NaN	1736.1	30	0	423.36	0.106	+			22516	KTQEIFHSK	9	52	559.3047406605258	1116.5949283878515	2	559.8070678710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KTQEIFHSK_	ENSG00000108557|ENST00000353383|RAI1;nc|ENSG00000258436|Q7Z5J4-2|RAI1;nc|ENSG00000258436|Q7Z5J4-3|RAI1	63.53385203322761	0.18415635464017938	3				NaN	NaN	0	NaN	1191	2963	4153
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4157	16.956	NaN	1559.6	30	0	754.5	0.106	+			15066	GTPESVQSAK	10	35	502.2574004001397	1002.5002478670795	2	502.2567138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTPESVQSAK_	ENSG00000162613|ENST00000370768|FUBP1;FUBP1|p.I301Yfs*22|2|0.26|ENSG00000162613|chr1:77964293-77964293|T/-|frameshift_variant;nc|ENSG00000162613|Q96AE4-2|FUBP1	20.83715455343099	0.7096666582730032	3				NaN	NaN	0	NaN	1192	2963	4153
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4158	16.958	NaN	1439.4	30	0	460.29	0.106			+	16677	HIMGGHMI	8	33	456.21510545532936	910.4156579774587	2	456.2152099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_HIMGGHM(Oxidation (M))I_	REV__CASK|p.N757Tfs*40|1|0.18|ENSG00000147044|chrX:41534753-41534753|T/-|frameshift_variant;REV__ENSG00000147044|ENST00000378163|CASK;REV__ENST00000472704.1_1_X:41411986-41437658:-|nuORF;REV__nc|ENSG00000147044|O14936-2|CASK;REV__nc|ENSG00000147044|O14936-3|CASK;REV__nc|ENSG00000147044|O14936-4|CASK;REV__nc|ENSG00000147044|O14936-5|CASK;REV__nc|ENSG00000147044|O14936-6|CASK	43.626045697637714	0.6338121648150432	3				NaN	NaN	0	NaN	1193	2963	4153
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4159	16.96	NaN	1710.7	30	0	169.22	0.106	+			6770	CESCLCLSGR	10	55	535.7240755804808	1069.4335982277614	2	535.723876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_CESCLCLSGR_	nc|ENSG00000197558|A2VEC9|SSPOP	36.446750945000026	0.5818864909973037	3				NaN	NaN	0	NaN	1194	2963	4153
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4160	16.962	NaN	3699.3	30	0	1139.1	0.037	+			42671	TAWHRRASP	9	43	361.192658470831	NaN	0	361.19268798828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TAWHRRASP_	ENST00000461838.5_1_13:28014569-28024229:-|nuORF	36.446750945000026	0.29355505452396785	3				NaN	NaN	0	NaN	1195	2963	4153
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4166	16.978	NaN	4170.4	30	0	1268.6	0.214	+			27845	MTAEEMKATE	10	52	570.7506195744519	1139.4866862157037	2	570.7507934570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MTAEEMKATE_	ENSG00000004478|ENST00000001008|FKBP4	42.86426827375447	0.522752283233888	3				NaN	NaN	0	NaN	1198	2966	4165
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4167	16.981	NaN	2656.8	30	0	1083.3	0.106	+			1326	AETGSGKTL	9	46	432.2277606452233	862.4409683572467	2	432.2273254394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AETGSGKTL_	DDX24|p.S507Ffs*17|1|0.26|ENSG00000089737|chr14:94060491-94060492|-/A|frameshift_variant;ENSG00000089737|ENST00000621632|DDX24;ENSG00000182810|ENST00000332395|DDX28;ENST00000555762.1_1_14:94524146-94547480:-|nuORF;nc|ENSG00000089737|Q9GZR7-2|DDX24	65.46538089061403	0.16805504838372562	3				NaN	NaN	0	NaN	1199	2966	4165
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4168	16.983	NaN	2098.4	30	0	540.29	0.106			+	8683	EEAEAVSGAGR	11	55	538.254883814061	1074.495214694922	2	538.25439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EEAEAVSGAGR_	REV__ENST00000419610.5_1_3:49977551-50091772:+|nuORF	37.59989570853033	0.5907838038483115	3				NaN	NaN	0	NaN	1200	2966	4165
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4169	16.985	NaN	2803	30	0	512.32	0.106			+	17856	IFSGGSSGGG	10	39	413.1911940329707	824.3678351327414	2	413.6922607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IFSGGSSGGG_	REV__CON__ENSEMBL:ENSBTAP00000038253	29.14955571784316	0.6417842315402807	3				NaN	NaN	0	NaN	1201	2966	4165
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4170	16.987	NaN	1100.1	30	0	293.23	0.106				-1	KMKKLARR	8	50	523.8328857421875	NaN	0	523.8328857421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_KM(Oxidation (M))KKLARR_	ENSG00000136944|ENST00000373474|LMX1B;ENSG00000162761|ENST00000342310|LMX1A;LMX1A|p.S344Kfs*5|1|0.06|ENSG00000162761|chr1:165204000-165204001|-/TTTT|frameshift_variant;nc|ENSG00000136944|O60663-2|LMX1B;nc|ENSG00000136944|O60663-3|LMX1B	33.51558372728122	1.7418937515398478	3				NaN	NaN	0	NaN	1202	2966	4165
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4171	16.989	NaN	922.65	30	0	76.288	0.035			+	2594	AQGGPGWFAQ	10	42	509.74139404296875	NaN	0	509.74139404296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AQGGPGWFAQ_	REV__ENSG00000151651|ENST00000445355|ADAM8;REV__nc|ENSG00000151651|P78325-2|ADAM8;REV__nc|ENSG00000151651|P78325-3|ADAM8	40.77816245573522	0.36390427802201647	3				NaN	NaN	0	NaN	1203	2966	4165
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4179	17.008	NaN	7103.9	30	0	1063.4	0.214	+			32942	REAVEQQKV	9	73	543.7993788252551	1085.58420471731	2	543.8001098632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_REAVEQQKV_	ENSG00000125844|ENST00000377813|RRBP1;nc|ENSG00000125844|Q9P2E9-3|RRBP1;RRBP1|p.A628Gfs*69|1|0.35|ENSG00000125844|chr20:17621915-17621916|-/T|frameshift_variant	101.45984612302182	0.0377122763612125	3				NaN	NaN	0	NaN	1208	2969	4178
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4180	17.012	NaN	4364.3	30	0	764.84	0.106	+			45053	TVGTESKVQ	9	63	474.7539395607535	947.493326188307	2	474.75347900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVGTESKVQ_	ENSG00000108557|ENST00000353383|RAI1;nc|ENSG00000258436|Q7Z5J4-2|RAI1;nc|ENSG00000258436|Q7Z5J4-3|RAI1;nc|ENSG00000258436|Q7Z5J4-4|RAI1	49.44154591367651	0.3095138337212152	3				NaN	NaN	0	NaN	1209	2969	4178
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4181	17.014	NaN	1463.2	30	0	424.37	0.106	+			22077	KSLENHLAK	9	51	520.3001098632812	NaN	0	520.3001098632812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KSLENHLAK_	ENSG00000177888|ENST00000367405|ZBTB41;ENST00000467322.1_1_1:197145142-197169603:-|nuORF;nc|ENSG00000177888|Q5SVQ8-2|ZBTB41;ZBTB41|p.D754Tfs*3|1|0.04|ENSG00000177888|chr1:197159829-197159830|-/AGAATGT|frameshift_variant;ZBTB41|p.D754Vfs*8|1|0.04|ENSG00000177888|chr1:197159828-197159829|-/GTTA|frameshift_variant;ZBTB41|p.E538*|1|0.36|ENSG00000177888|chr1:197181052-197181053|-/TA|frameshift_variant;ZBTB41|p.H239Tfs*24|2|0.36|ENSG00000177888|chr1:197199759-197199760|-/T|frameshift_variant;ZBTB41|p.I624Yfs*88|2|0.31|ENSG00000177888|chr1:197176573-197176573|T/-|frameshift_variant;ZBTB41|p.K238Nfs*4|2|0.33|ENSG00000177888|chr1:197199760-197199760|T/-|frameshift_variant	80.45461616416974	0.0698259577396595	3				NaN	NaN	0	NaN	1210	2969	4178
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4182	17.016	NaN	6543.2	30	0	1343.6	0.106	+			35155	SAIDKMTKK	9	56	511.2893333798192	1020.5641138264384	2	511.2901306152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SAIDKMTKK_	CTNNA1|p.K493Nfs*31|1|0.19|ENSG00000044115|chr5:138917827-138917827|A/-|frameshift_variant;CTNNA1|p.T832*|1|0.29|ENSG00000044115|chr5:138933859-138933862|CAGA/-|frameshift_variant;ENSG00000044115|ENST00000302763|CTNNA1;ENST00000515849.2_1_5:114726864-114727050:-|nuORF;ENST00000517534.5_1_5:138163374-138223382:+|nuORF;nc|ENSG00000044115|P35221-2|CTNNA1	123.20810148215591	0.019257656778428764	3				NaN	NaN	0	NaN	1211	2969	4178
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4183	17.018	NaN	1748.2	30	0	656.24	0.106	+			38288	SQQPIRLTP	9	27	347.2016906738281	NaN	0	347.2016906738281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SQQPIRLTP_	ENST00000334888.9_1_11:61165377-61165809:+|nuORF;ENST00000515837.6_1_11:61165377-61165809:+|nuORF	30.503639358989545	0.3235605894931338	3				NaN	NaN	0	NaN	1212	2969	4178
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4184	17.019	NaN	1077.8	30	0	89.393	0.036	+			30849	QEGAYYSLPS	10	48	557.7552654194278	1113.4959779056555	2	557.7548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QEGAYYSLPS_	ERAL1|p.R115Sfs*53|1|0.33|ENSG00000132591|chr17:28856322-28856323|-/T|frameshift_variant	39.252832667884924	0.5560298534376815	3				NaN	NaN	0	NaN	1213	2969	4178
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4192	17.037	NaN	7228.1	30	0	1541.3	0.214				-1	APCYRCVS	8	67	478.20984182350156	954.4051307138031	2	478.2090148925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_APCYRC(Carbamidomethyl (C))VS_	TMEM132A|p.L494Cfs*82|1|0.14|ENSG00000006118|chr11:60933660-60933660|C/-|frameshift_variant	35.200714571348534	0.6875396545722289	3				NaN	NaN	0	NaN	1218	2972	4191
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4193	17.041	NaN	8962.1	30	0	1399.6	0.106	+			12771	GELNSRLSS	9	61	481.74890899524127	961.4832650572826	2	481.748291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GELNSRLSS_	ENSG00000204267|ENST00000374897|TAP2;nc|ENSG00000204267|Q03519-2|TAP2;TAP2|p.K532Sfs*29|1|0.43|ENSG00000204267|chr6:32830307-32830307|T/-|frameshift_variant;TAP2|p.Q330Rfs*50|1|0.33|ENSG00000204267|chr6:32832783-32832783|C/-|frameshift_variant;TAP2|p.V467Lfs*2|1|0.15|ENSG00000204267|chr6:32830680-32830680|C/-|frameshift_variant	77.31757898189308	0.1091473830098891	3				NaN	NaN	0	NaN	1219	2972	4191
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4194	17.043	NaN	1681	30	0	367.66	0.106			+	-1	ATLHREIM	8	28	329.5076904296875	NaN	0	329.5076904296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_ATLHREIM(Oxidation (M))_	REV__ENSG00000075292|ENST00000264447|ZNF638;REV__ENST00000492262.1_1_2:71654468-71655831:+|nuORF;REV__nc|ENSG00000075292|Q14966-3|ZNF638;REV__nc|ENSG00000075292|Q14966-5|ZNF638	31.954861631926434	1.7418937515398478	3				NaN	NaN	0	NaN	1220	2972	4191
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4195	17.045	NaN	5124.7	30	0	1459.6	0.106	+			22773	KVFDAKPSAK	10	34	364.21365672897264	1089.6191407871179	3	364.21337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KVFDAKPSAK_	ENSG00000143889|ENST00000449105|HNRNPLL;nc|ENSG00000143889|Q8WVV9-4|HNRNPLL;nc|ENSG00000143889|Q8WVV9-5|HNRNPLL	37.50817390946774	0.5721060100277453	3				NaN	NaN	0	NaN	1221	2972	4191
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4196	17.046	NaN	1360.5	30	0	157.83	0.106	+			13747	GQCPMRVQK	9	50	552.276615578722	1102.538678224244	2	552.27587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_GQC(Carbamidomethyl (C))PMRVQK_	ENSG00000165475|ENST00000298248|CRYL1;nc|ENSG00000165475|Q9Y2S2-2|CRYL1	51.33545320467046	0.2872990594074956	3				NaN	NaN	0	NaN	1222	2972	4191
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4197	17.048	NaN	2059.8	30	0	309.71	0.037			+	25069	LLLKKGDHR	9	42	360.5613694785601	1078.6622790358804	3	360.8952331542969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LLLKKGDHR_	REV__ENST00000496384.6_2_7:140425901-140426006:-|nuORF	45.9519527083369	0.35044536499095585	3				NaN	NaN	0	NaN	1223	2972	4191
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4205	17.066	NaN	1277.5	30	0	261.67	0.214	+			22774	KVFDAKPSAK	10	47	545.81707123465	NaN	0	545.8173217773438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVFDAKPSAK_	ENSG00000143889|ENST00000449105|HNRNPLL;nc|ENSG00000143889|Q8WVV9-4|HNRNPLL;nc|ENSG00000143889|Q8WVV9-5|HNRNPLL	45.908116695636124	0.331471961372572	3				NaN	NaN	0	NaN	1228	2975	4204
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4206	17.07	NaN	1421.9	30	0	315.38	0.106	+			46659	VGEKGIDIII	10	43	528.8174471555536	NaN	0	528.817626953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VGEKGIDIII_	ENSG00000116791|ENST00000340866|CRYZ;nc|ENSG00000116791|Q08257-2|CRYZ	27.047317107675042	0.41136583337917604	3				NaN	NaN	0	NaN	1229	2975	4204
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4207	17.072	NaN	681.33	30	0	90.272	0.036			+	22891	KVLVPDVPTL	10	40	540.8387451171875	NaN	0	540.8387451171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KVLVPDVPTL_	REV__ENSG00000148840|ENST00000278070|PPRC1;REV__nc|ENSG00000148840|Q5VV67-2|PPRC1;REV__PPRC1|p.G704Vfs*30|1|0.2|ENSG00000148840|chr10:102140614-102140614|G/-|frameshift_variant	20.94693142431847	0.4201028297492154	3				NaN	NaN	0	NaN	1230	2975	4204
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4218	17.095	NaN	5418.2	30	0	1751.9	0.214	+			384	AASEAGRAM	9	56	432.20593335250055	862.3973137718011	2	432.2056884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AASEAGRAM_	ENSG00000071859|ENST00000393600|FAM50A	71.87747018426188	0.13267044672804276	3				NaN	NaN	0	NaN	1238	2978	4217
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4219	17.099	NaN	1496.5	30	0	230.23	0.106	+			49245	VVNPKYEGK	9	49	517.2873856874708	1032.5602184417414	2	517.2876586914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVNPKYEGK_	ENSG00000150093|ENST00000302278|ITGB1	62.107414245175825	0.1960472003779324	3				NaN	NaN	0	NaN	1239	2978	4217
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4220	17.101	NaN	1157.1	30	0	127.72	0.106				-1	QFDEIREMIN	10	45	655.8083321191024	1309.6021113050047	2	656.3082885742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_QFDEIREM(Oxidation (M))IN_	tr|U7T8H9|U7T8H9_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00060PE=4SV=1	42.86426827375447	0.522752283233888	3				NaN	NaN	0	NaN	1240	2978	4217
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4221	17.103	NaN	3582	30	0	417.31	0.036	+			42450	TAMAAAKAPTK	11	63	530.7943291218895	1059.574105310579	2	531.2974243164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TAMAAAKAPTK_	ENSG00000114391|ENST00000394077|RPL24	117.9484562665482	0.024124566054047815	3				NaN	NaN	0	NaN	1241	2978	4217
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4229	17.121	NaN	192100	30	0	32285	0.211	+			41428	SVNGKVLSK	9	110	466.28215502493134	930.5497571166627	2	466.2819519042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVNGKVLSK_	ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2;NOMO1|p.P1102Hfs*42|1|0.36|ENSG00000103512|chr16:14886838-14886838|C/-|frameshift_variant;NOMO1|p.P141Sfs*12|1|0.33|ENSG00000103512|chr16:14846592-14846593|-/AG|frameshift_variant	109.82975700811294	0.02917171107062681	3				NaN	NaN	0	NaN	1246	2981	4228
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4230	17.124	NaN	3092.5	30	0	716.32	0.106	+			15086	GTQGSPITK	9	48	444.7432431988752	887.4719334645504	2	444.742919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTQGSPITK_	ENSG00000110237|ENST00000263674|ARHGEF17;ENST00000536481.1_1_11:73075528-73075729:+|nuORF	83.6470233535746	0.08277643980271215	3				NaN	NaN	0	NaN	1247	2981	4228
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4231	17.126	NaN	1799.8	30	0	190.67	0.106	+			27865	MTHSEMRK	8	54	510.2412025723412	NaN	0	510.2417297363281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MTHSEMRK_	ENSG00000135541|ENST00000265602|AHI1;ENST00000475846.6_3_6:135607593-135622557:-|nuORF	47.91560031466742	1.7418937515398478	3				NaN	NaN	0	NaN	1248	2981	4228
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4232	17.128	NaN	1599.4	30	0	214.85	0.106				-1	LKLIMSCP	8	44	460.7511291503906	NaN	0	460.7511291503906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_LKLIM(Oxidation (M))SCP_	ENSG00000170185|ENST00000307017|USP38;nc|ENSG00000170185|Q8NB14-2|USP38;USP38|p.K823Nfs*2|1|0.24|ENSG00000170185|chr4:143214440-143214440|A/-|frameshift_variant;USP38|p.L816Hfs*13|1|0.05|ENSG00000170185|chr4:143214419-143214420|-/ATCATATGAAA|frameshift_variant;USP38|p.N109T|1|0.09|ENSG00000170185|chr4:143185776-143185776|A/C|missense_variant	37.15910966729921	1.7418937515398478	3				NaN	NaN	0	NaN	1249	2981	4228
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4233	17.13	NaN	2387.5	30	0	467.74	0.106	+			9928	EQVELSRK	8	57	494.77437074996914	NaN	0	494.7746276855469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EQVELSRK_	ENSG00000088992|ENST00000335209|TESC;nc|ENSG00000088992|Q96BS2-2|TESC;nc|ENSG00000088992|Q96BS2-3|TESC	53.351449002276354	1.7418937515398478	3				NaN	NaN	0	NaN	1250	2981	4228
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4234	17.132	NaN	14122	30	0	2973.5	0.106	+			35009	SACHKYFEK	9	81	390.51879648614477	1168.5345600586343	3	390.51837158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_SAC(Carbamidomethyl (C))HKYFEK_	ENSG00000163993|ENST00000296370|S100P;ENST00000513778.1_1_4:6695618-6698766:+|nuORF;S100P|p.T82M|1|0.3|ENSG00000163993|chr4:6696999-6696999|C/T|missense_variant	76.16968421966216	0.11411088698345859	3				NaN	NaN	0	NaN	1251	2981	4228
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4235	17.133	NaN	877.12	30	0	178.86	0.036	+			20450	KEVEERPAP	9	40	527.780517578125	NaN	0	527.780517578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KEVEERPAP_	ENSG00000130429|ENST00000646101|ARPC1B	27.047317107675042	0.34101084205454363	3				NaN	NaN	0	NaN	1252	2981	4228
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4246	17.156	NaN	4090.1	30	0	1295	0.214			+	19217	KAAGALSK	8	52	373.2323057894046	744.4500586456093	2	373.23175048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAAGALSK_	REV__ENSG00000135569|ENST00000258034|TAAR5	71.29570347882199	0.39610197767395533	3				NaN	NaN	0	NaN	1260	2984	4245
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4247	17.16	NaN	4295.3	30	0	554.54	0.106			+	26117	LSPCPRGDGQ	10	47	515.2428998725494	1028.4712468118987	2	515.2432861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSPCPRGDGQ_	REV__ENSG00000005108|ENST00000423059|THSD7A;REV__THSD7A|p.C1369Lfs*5|1|0.13|ENSG00000005108|chr7:11406431-11406432|-/A|frameshift_variant;REV__THSD7A|p.R1591Kfs*62|1|0.26|ENSG00000005108|chr7:11379101-11379102|-/C|frameshift_variant	27.882242232435846	0.6521336255503853	3				NaN	NaN	0	NaN	1261	2984	4245
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4248	17.162	NaN	1733.5	30	0	329.68	0.106			+	43778	TLKEKEKQ	8	44	502.2931379501292	1002.5717229670585	2	502.29266357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TLKEKEKQ_	REV__ENSG00000019144|ENST00000600882|PHLDB1;REV__ENST00000526699.5_1_11:118505736-118509975:+|nuORF;REV__ENST00000532517.5_1_11:118498004-118527530:+|nuORF;REV__nc|ENSG00000019144|Q86UU1-2|PHLDB1;REV__nc|ENSG00000019144|Q86UU1-3|PHLDB1	93.1432384553994	0.2679547234115296	3				NaN	NaN	0	NaN	1262	2984	4245
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4249	17.163	NaN	1505.5	30	0	359.66	0.034			+	41076	SVILGHVTAG	10	53	477.2737450433823	952.5329371535646	2	477.2734069824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVILGHVTAG_	REV__ENSG00000205639|ENST00000338315|MFSD2B	53.351449002276354	0.42630798468005626	3				NaN	NaN	0	NaN	1263	2984	4245
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4261	17.188	NaN	15391	30	0	4254.1	0.214	+			40246	STSGTVINK	9	68	453.74834704085515	905.4821411485103	2	453.7477722167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STSGTVINK_	CHFR|p.L97Tfs*14|1|0.63|ENSG00000072609|chr12:132872338-132872339|AA/-|frameshift_variant;ENSG00000072609|ENST00000450056|CHFR;ENST00000535181.5_1_12:133448808-133463914:-|nuORF;ENST00000536196.1_1_12:133448709-133463914:-|nuORF;nc|ENSG00000072609|Q96EP1-3|CHFR;nc|ENSG00000072609|Q96EP1-4|CHFR;nc|ENSG00000072609|Q96EP1-5|CHFR;nc|ENSG00000072609|Q96EP1|CHFR	162.25246889848123	0.0040893836092247005	3				NaN	NaN	0	NaN	1272	2987	4260
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4262	17.192	NaN	7196.1	30	0	2616.6	0.106	+			40373	STTTTQITK	9	56	490.766945928419	979.519338923638	2	490.766357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STTTTQITK_	ENSG00000159023|ENST00000343067|EPB41;ENST00000462032.1_1_1:29424324-29436027:+|nuORF;nc|ENSG00000159023|P11171-2|EPB41;nc|ENSG00000159023|P11171-3|EPB41;nc|ENSG00000159023|P11171-5|EPB41;nc|ENSG00000159023|P11171-6|EPB41	101.25262130126117	0.03792372629710479	3				NaN	NaN	0	NaN	1273	2987	4260
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4263	17.194	NaN	3000	30	0	407.86	0.106			+	29144	NVAKLNGLL	9	61	471.2930003563397	940.5714477794794	2	471.2924499511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NVAKLNGLL_	REV__ENSG00000125124|ENST00000245157|BBS2	55.50420428727701	0.2510918378945873	3				NaN	NaN	0	NaN	1274	2987	4260
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4264	17.196	NaN	1478	30	0	404.88	0.106			+	12268	GAVQDIERPI	10	37	366.53643798828125	NaN	0	366.53643798828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GAVQDIERPI_	REV__ENSG00000204361|ENST00000389586|NXPE2	27.047317107675042	0.41136583337917604	3				NaN	NaN	0	NaN	1275	2987	4260
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4265	17.198	NaN	9635.1	30	0	3266.7	0.106	+			30545	QAKQESTEY	9	67	542.2516871152108	1082.4888212972214	2	542.2517700195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QAKQESTEY_	ENSG00000026025|ENST00000544301|VIM;ENST00000421459.2_2_10:17272631-17276850:+|nuORF;VIM|p.R310C|1|0.13|ENSG00000026025|chr10:17234738-17234738|C/T|missense_variant	112.10723106719422	0.02684780151337622	3				NaN	NaN	0	NaN	1276	2987	4260
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4266	17.199	NaN	1003.2	30	0	131.5	0.036			+	8152	EAAGVLKNPAQ	11	42	549.3007202148438	NaN	0	549.3007202148438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EAAGVLKNPAQ_	REV__ENSG00000005189|ENST00000261377|REXO5;REV__ENST00000567297.5_1_16:20818275-20837201:+|nuORF;REV__nc|ENSG00000005189|Q96IC2-2|REXO5	29.550750289552195	0.43372083775723597	3				NaN	NaN	0	NaN	1277	2987	4260
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4267	17.2	NaN	452.58	30	0	58.135	0.142	+			7461	DFTGRFCQVP	10	28	585.2736206054688	NaN	0	585.2736206054688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DFTGRFCQVP_	ENSG00000168056|ENST00000301873|LTBP3;LTBP3|p.D596*|1|0.24|ENSG00000168056|chr11:65547981-65547982|-/G|frameshift_variant;LTBP3|p.L294Sfs*94|1|0.48|ENSG00000168056|chr11:65553515-65553515|G/-|frameshift_variant;nc|ENSG00000168056|Q9NS15-2|LTBP3	14.864876125193954	0.4201028297492154	3				NaN	NaN	0	NaN	1278	2987	4260
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4280	17.229	NaN	2768.8	30	0	338.19	0.214	+			35980	SEHAVNKQL	9	57	513.2725121288145	1024.5304713244288	2	513.2721557617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEHAVNKQL_	ENSG00000166595|ENST00000422424|CIAO2B;ENST00000562362.5_1_16:66966108-66968009:-|nuORF	64.20726635412375	0.17854274437659667	3				NaN	NaN	0	NaN	1288	2990	4279
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4281	17.233	NaN	1742.5	30	0	317.28	0.106	+			22647	KTWLSLKVA	9	52	523.3223894605876	NaN	0	523.3223876953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTWLSLKVA_	ENSG00000134262|ENST00000369569|AP4B1;ENST00000479285.5_1_1:114437689-114438127:-|nuORF	53.08895987439943	0.18540527177656715	3				NaN	NaN	0	NaN	1289	2990	4279
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4282	17.234	NaN	2195.7	30	0	553.06	0.106	+			33510	RKNVLTHC	8	53	485.76648607057336	969.5184192079467	2	485.76611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RKNVLTHC_	ENSG00000109452|ENST00000262992|INPP4B;INPP4B|p.K530Efs*15|1|0.23|ENSG00000109452|chr4:142145972-142145973|-/C|frameshift_variant	40.5726180659479	0.6527593143185008	3				NaN	NaN	0	NaN	1290	2990	4279
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4283	17.236	NaN	1006.9	30	0	252.16	0.106			+	47002	VKTCGPEPVK	10	51	529.290771484375	NaN	0	529.290771484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VKTCGPEPVK_	REV__ENSG00000163209|ENST00000295367|SPRR3;REV__ENSG00000163209|ENST00000295367|SPRR3;REV__ENSG00000163209|ENST00000295367|SPRR3;REV__ENSG00000163209|ENST00000295367|SPRR3;REV__ENSG00000163209|ENST00000295367|SPRR3	35.15202426646627	0.38475398474706135	3				NaN	NaN	0	NaN	1291	2990	4279
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4284	17.238	NaN	3174.6	30	0	409.72	0.106	+			33813	RQSCVMVQK	9	69	568.289321768758	1134.5640906043159	2	568.2896728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_RQSC(Carbamidomethyl (C))VMVQK_	ENSG00000128833|ENST00000261839|MYO5C;ENST00000558902.5_1_15:52529812-52548856:-|nuORF;ENST00000560809.5_1_15:52532054-52548856:-|nuORF;MYO5C|p.E1050Sfs*8|1|0.32|ENSG00000128833|chr15:52229192-52229192|C/-|frameshift_variant;MYO5C|p.L1151Wfs*19|1|0.17|ENSG00000128833|chr15:52223719-52223719|A/-|frameshift_variant;MYO5C|p.L933Hfs*33|1|0.04|ENSG00000128833|chr15:52237552-52237553|-/T|frameshift_variant;MYO5C|p.L933Sfs*35|1|0.04|ENSG00000128833|chr15:52237553-52237554|-/AAGTGGA|frameshift_variant	77.31757898189308	0.1091473830098891	3				NaN	NaN	0	NaN	1292	2990	4279
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4285	17.24	NaN	2785.7	30	0	1131.4	0.036			+	33225	RFRAVQIR	8	32	349.2167663574219	NaN	0	349.2167663574219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RFRAVQIR_	REV__ENSG00000147613|ENST00000276616|PSKH2;REV__PSKH2|p.D147Efs*26|1|0.07|ENSG00000147613|chr8:86064376-86064377|-/AAATTTTAAT|frameshift_variant;REV__PSKH2|p.E187*|1|0.07|ENSG00000147613|chr8:86064258-86064259|-/TA|frameshift_variant;REV__PSKH2|p.E187Afs*10|1|0.07|ENSG00000147613|chr8:86064257-86064258|-/G|frameshift_variant	40.5726180659479	1.7418937515398478	3				NaN	NaN	0	NaN	1293	2990	4279
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4286	17.24	NaN	2240	30	0	441.05	0.142	+			1255	AERVIIWAR	9	40	371.8905800361861	1112.6499107087584	3	371.89013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AERVIIWAR_	ENSG00000184445|ENST00000333479|KNTC1;KNTC1|p.K1646Nfs*2|2|0.35|ENSG00000184445|chr12:122603073-122603073|A/-|frameshift_variant;KNTC1|p.K1646Tfs*12|1|0.13|ENSG00000184445|chr12:122603073-122603074|AA/-|frameshift_variant;KNTC1|p.L1647Tfs*12|1|0.3|ENSG00000184445|chr12:122603072-122603073|-/A|frameshift_variant	34.172542307311794	0.4838870758800184	3				NaN	NaN	0	NaN	1294	2990	4279
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4293	17.26	NaN	6195.1	30	0	1993.9	0.214	+			21154	KKTVESKE	8	67	474.77213721755635	947.5297215019127	2	474.7713623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KKTVESKE_	ARMC2|p.L395Yfs*7|1|0.23|ENSG00000118690|chr6:108912387-108912387|T/-|frameshift_variant;ARMC2|p.L815*|1|0.05|ENSG00000118690|chr6:108965134-108965134|T/-|frameshift_variant;ENSG00000118690|ENST00000392644|ARMC2	71.87747018426188	0.391254423828572	3				NaN	NaN	0	NaN	1298	2993	4292
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4294	17.264	NaN	10469	30	0	3688.4	0.106	+			36395	SETKNANSL	9	72	482.24101084251066	962.4674687518213	2	482.2403564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SETKNANSL_	ENSG00000137673|ENST00000260227|MMP7;ENST00000531200.1_1_11:102398162-102401431:-|nuORF;ENST00000533366.5_1_11:102395628-102401431:-|nuORF	129.42129120953632	0.01549634589885217	3				NaN	NaN	0	NaN	1299	2993	4292
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4295	17.266	NaN	5598.8	30	0	676.28	0.106	+			45246	TVQEKTFNK	9	71	547.7956936974775	1093.576834461755	2	547.7958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVQEKTFNK_	ENSG00000163104|ENST00000354268|SMARCAD1;nc|ENSG00000163104|Q9H4L7-2|SMARCAD1;SMARCAD1|p.K230Rfs*28|1|0.26|ENSG00000163104|chr4:94240985-94240985|A/-|frameshift_variant;SMARCAD1|p.K734Qfs*6|1|0.31|ENSG00000163104|chr4:94278630-94278631|-/C|frameshift_variant	88.17693792209575	0.07000514020414955	3				NaN	NaN	0	NaN	1300	2993	4292
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4296	17.267	NaN	2171.7	30	0	620.48	0.106	+			2700	AQQKFKINK	9	60	552.8299779886731	1103.6454030441462	2	552.8301391601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AQQKFKINK_	ENSG00000128708|ENST00000264108|HAT1;ENST00000457761.6_1_2:172821936-172844354:+|nuORF;nc|ENSG00000128708|O14929-2|HAT1	56.43379154798735	0.2433427591689151	3				NaN	NaN	0	NaN	1301	2993	4292
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4297	17.269	NaN	3846.8	30	0	584.96	0.106			+	2041	AKRFNKDLI	9	47	368.8890775364374	1103.6454032095123	3	368.88885498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AKRFNKDLI_	REV__ENSG00000119041|ENST00000263956|GTF3C3	44.377184641726394	0.36891676396732553	3				NaN	NaN	0	NaN	1302	2993	4292
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4298	17.271	NaN	1261.8	30	0	393.82	0.036	+			20646	KGIFLLRNQ	9	45	544.8321336858994	1087.6497144385987	2	544.8325805664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KGIFLLRNQ_	ENSG00000162571|ENST00000379289|TTLL10;nc|ENSG00000162571|Q6ZVT0-2|TTLL10;nc|ENSG00000162571|Q6ZVT0-3|TTLL10	25.57405402267927	0.5642445186134241	3				NaN	NaN	0	NaN	1303	2993	4292
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4299	17.272	NaN	924.69	30	0	156.6	0.139			+	33480	RIYRNGKKFEA	11	45	461.2608337402344	NaN	0	461.2608337402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RIYRNGKKFEA_	REV__ENSG00000198952|ENST00000361813|SMG5;REV__ENST00000473643.1_1_1:156221192-156222326:-|nuORF;REV__SMG5|p.A961Gfs*3|1|0.36|ENSG00000198952|chr1:156250943-156250944|-/C|frameshift_variant	47.227680397652996	0.33523056580093125	3				NaN	NaN	0	NaN	1304	2993	4292
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4306	17.29	NaN	6851.2	30	0	857.28	0.214			+	30676	QCCRWVNEG	9	73	547.7292820582195	1093.444011183239	2	547.728759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QCCRWVNEG_	REV__ENSG00000141750|ENST00000333461|STAC2;REV__nc|ENSG00000141750|Q6ZMT1-2|STAC2	84.9155231211612	0.07920012719736333	3				NaN	NaN	0	NaN	1308	2996	4305
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4307	17.293	NaN	2553.3	30	0	955.23	0.106			+	43436	TGLFGPPCKC	10	27	341.4992370605469	NaN	0	341.4992370605469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TGLFGPPCKC_	REV__ENSG00000165124|ENST00000374469|SVEP1;REV__ENST00000467821.1_1_9:113205816-113312285:-|nuORF;REV__nc|ENSG00000165124|Q4LDE5-4|SVEP1;REV__SVEP1|p.Y3375Mfs*48|1|0.3|ENSG00000165124|chr9:110386012-110386012|A/-|frameshift_variant	29.14955571784316	0.4044631218331212	3				NaN	NaN	0	NaN	1309	2996	4305
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4308	17.295	NaN	1738.3	30	0	415.21	0.106				-1	 	0	29	324.20250677335963	646.3904606135193	2	324.2021789550781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1310	2996	4305
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4309	17.297	NaN	3164.5	30	0	785.7	0.106				-1	 	0	53	503.7882596242824	1005.5619663153648	2	503.78790283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1311	2996	4305
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4310	17.299	NaN	1614.9	30	0	152.3	0.106	+			38280	SQQKVVITK	9	38	344.2132263183594	NaN	0	344.2132263183594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SQQKVVITK_	ENSG00000007952|ENST00000372966|NOX1;ENSG00000165168|ENST00000378588|CYBB;nc|ENSG00000007952|Q9Y5S8-3|NOX1;NOX1|p.R290H|1|0.17|ENSG00000007952|chrX:100851261-100851261|C/T|missense_variant	41.42661286455405	0.26577678759562784	3				NaN	NaN	0	NaN	1312	2996	4305
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4311	17.301	NaN	3884.2	30	0	1474.2	0.106			+	-1	LLLILCCAP	9	38	339.1943189308548	NaN	0	339.1942138671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_LLLILC(Carbamidomethyl (C))CAP_	REV__ENSG00000165323|ENST00000525166|FAT3;REV__FAT3|p.A1047Cfs*51|2|0.18|ENSG00000165323|chr11:92524922-92524923|-/T|frameshift_variant;REV__FAT3|p.F1046Lfs*9|1|0.5|ENSG00000165323|chr11:92524923-92524923|T/-|frameshift_variant;REV__FAT3|p.G819Vfs*17|1|0.35|ENSG00000165323|chr11:92355013-92355013|G/-|frameshift_variant;REV__FAT3|p.M515Cfs*42|1|0.23|ENSG00000165323|chr11:92354101-92354101|C/-|frameshift_variant;REV__FAT3|p.N1793Kfs*14|1|0.21|ENSG00000165323|chr11:92798835-92798836|-/A|frameshift_variant;REV__FAT3|p.P4078Rfs*36|1|0.42|ENSG00000165323|chr11:92883135-92883135|C/-|frameshift_variant;REV__FAT3|p.V1884Sfs*21|1|0.26|ENSG00000165323|chr11:92799110-92799110|G/-|frameshift_variant;REV__FAT3|p.V4082Rfs*13|1|0.23|ENSG00000165323|chr11:92883145-92883146|-/C|frameshift_variant;REV__FAT3|p.V4210Cfs*6|1|0.05|ENSG00000165323|chr11:92889212-92889213|-/T|frameshift_variant;REV__nc|ENSG00000165323|Q8TDW7-2|FAT3;REV__nc|ENSG00000165323|Q8TDW7|FAT3	21.9598887501803	0.3626577482100488	3				NaN	NaN	0	NaN	1313	2996	4305
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4312	17.303	NaN	1471	30	0	479.86	0.039			+	-1	ILNVIEMLINP	11	41	428.9134216308594	NaN	0	428.9134216308594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_ILNVIEM(Oxidation (M))LINP_	REV__tr|U7T4V2|U7T4V2_FUSNUGuanosine-3',5'-bis(Diphosphate)3'-pyrophosphohydrolaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00568PE=3SV=1	29.550750289552195	0.43372083775723597	3				NaN	NaN	0	NaN	1314	2996	4305
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4318	17.317	NaN	3018.5	30	0	1475.9	0.215			+	34275	RTKGLFWK	8	48	518.307025541417	1034.599498149634	2	518.3075561523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTKGLFWK_	REV__ENST00000495826.5_1_22:20094146-20094794:+|nuORF	32.81241826257853	0.7059802730411993	3				NaN	NaN	0	NaN	1317	2999	4317
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4319	17.321	NaN	2337.3	30	0	485.36	0.106	+			49003	VVGPELHHK	9	53	508.28856185390066	1014.5625707746013	2	508.2881164550781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVGPELHHK_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	56.72105179125745	0.24094814563026265	3				NaN	NaN	0	NaN	1318	2999	4317
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4320	17.322	NaN	1542.9	30	0	266.23	0.106	+			47531	VQSGHVNLK	9	45	491.2779755058801	NaN	0	491.27813720703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VQSGHVNLK_	ENSG00000178913|ENST00000313368|TAF7	44.377184641726394	0.24544280798894275	3				NaN	NaN	0	NaN	1319	2999	4317
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4321	17.324	NaN	1292.7	30	0	261.11	0.106	+			22295	KTDTTGAGL	9	41	432.2273833369255	862.4402137406511	2	432.2278137207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTDTTGAGL_	ENSG00000185038|ENST00000389758|MROH2A;MROH2A|p.L1521Sfs*47|1|0.43|ENSG00000185038|chr2:233829730-233829730|C/-|frameshift_variant	29.14955571784316	0.5308295550522326	3				NaN	NaN	0	NaN	1320	2999	4317
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4322	17.326	NaN	1681.7	30	0	286.22	0.106	+			25937	LSHINQSL	8	40	456.25121227291027	910.4878716126206	2	456.2511901855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSHINQSL_	ENSG00000186409|ENST00000657597|CCDC30;ENST00000471390.5_1_1:43002943-43047151:+|nuORF;nc|ENSG00000186409|Q5VVM6|CCDC30	74.25504064058377	0.37144338840759816	3				NaN	NaN	0	NaN	1321	2999	4317
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4323	17.328	NaN	1035.4	30	0	279.57	0.106				-1	LCAPDPGSE	9	43	473.2033573563864	944.3921617795728	2	473.20306396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_LC(Carbamidomethyl (C))APDPGSE_	ENSG00000171443|ENST00000301073|ZNF524	26.79610172149135	0.5528238334041078	3				NaN	NaN	0	NaN	1322	2999	4317
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4324	17.33	NaN	612.79	30	0	63.862	0.033			+	37576	SLNHVSTK	8	34	443.2431945800781	NaN	0	443.2431945800781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SLNHVSTK_	REV__ENSG00000155714|ENST00000424898|PDZD9	53.351449002276354	1.7418937515398478	3				NaN	NaN	0	NaN	1323	2999	4317
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4332	17.348	NaN	2617	30	0	518.03	0.214	+			12319	GDGPIKSK	8	49	401.2276399511301	800.4407269690602	2	401.22735595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GDGPIKSK_	ENSG00000120156|ENST00000380036|TEK;nc|ENSG00000120156|Q02763-2|TEK;nc|ENSG00000120156|Q02763-3|TEK;TEK|p.E624Nfs*33|1|0.41|ENSG00000120156|chr9:27197556-27197556|G/-|frameshift_variant;TEK|p.N809Tfs*21|1|0.22|ENSG00000120156|chr9:27206639-27206639|A/-|frameshift_variant;TEK|p.N884Kfs*6|1|0.16|ENSG00000120156|chr9:27209197-27209197|C/-|frameshift_variant;TEK|p.S586Vfs*12|1|0.27|ENSG00000120156|chr9:27197441-27197441|A/-|frameshift_variant	34.172542307311794	0.6954784234644539	3				NaN	NaN	0	NaN	1328	3002	4331
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4333	17.351	NaN	8769.2	30	0	1145.1	0.106			+	-1	KPACRAGVIR	10	56	376.55410977283134	1126.640499918694	3	376.55389404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_KPAC(Carbamidomethyl (C))RAGVIR_	REV__F7|p.G216Afs*17|1|0.16|ENSG00000057593|chr13:113116836-113116836|G/-|frameshift_variant	35.15202426646627	0.5927656479315102	3				NaN	NaN	0	NaN	1329	3002	4331
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4334	17.353	NaN	4477	30	0	824.11	0.106	+			44795	TTQRPLHINK	10	52	403.23576512223724	1206.6854659669118	3	403.2352600097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TTQRPLHINK_	CACNA1C|p.A2072Pfs*18|1|0.55|ENSG00000151067|chr12:2688729-2688729|G/-|frameshift_variant;CACNA1C|p.P2073Qfs*17|1|0.21|ENSG00000151067|chr12:2688733-2688733|C/-|frameshift_variant;ENSG00000151067|ENST00000399655|CACNA1C;nc|ENSG00000151067|Q13936-10|CACNA1C;nc|ENSG00000151067|Q13936-11|CACNA1C;nc|ENSG00000151067|Q13936-13|CACNA1C;nc|ENSG00000151067|Q13936-14|CACNA1C;nc|ENSG00000151067|Q13936-15|CACNA1C;nc|ENSG00000151067|Q13936-16|CACNA1C;nc|ENSG00000151067|Q13936-17|CACNA1C;nc|ENSG00000151067|Q13936-18|CACNA1C;nc|ENSG00000151067|Q13936-19|CACNA1C;nc|ENSG00000151067|Q13936-2|CACNA1C;nc|ENSG00000151067|Q13936-20|CACNA1C;nc|ENSG00000151067|Q13936-21|CACNA1C;nc|ENSG00000151067|Q13936-22|CACNA1C;nc|ENSG00000151067|Q13936-23|CACNA1C;nc|ENSG00000151067|Q13936-24|CACNA1C;nc|ENSG00000151067|Q13936-25|CACNA1C;nc|ENSG00000151067|Q13936-26|CACNA1C;nc|ENSG00000151067|Q13936-27|CACNA1C;nc|ENSG00000151067|Q13936-28|CACNA1C;nc|ENSG00000151067|Q13936-29|CACNA1C;nc|ENSG00000151067|Q13936-3|CACNA1C;nc|ENSG00000151067|Q13936-30|CACNA1C;nc|ENSG00000151067|Q13936-31|CACNA1C;nc|ENSG00000151067|Q13936-32|CACNA1C;nc|ENSG00000151067|Q13936-33|CACNA1C;nc|ENSG00000151067|Q13936-34|CACNA1C;nc|ENSG00000151067|Q13936-35|CACNA1C;nc|ENSG00000151067|Q13936-36|CACNA1C;nc|ENSG00000151067|Q13936-37|CACNA1C;nc|ENSG00000151067|Q13936-4|CACNA1C;nc|ENSG00000151067|Q13936-5|CACNA1C;nc|ENSG00000151067|Q13936-6|CACNA1C;nc|ENSG00000151067|Q13936-7|CACNA1C;nc|ENSG00000151067|Q13936-8|CACNA1C;nc|ENSG00000151067|Q13936-9|CACNA1C;nc|ENSG00000151067|Q13936|CACNA1C	41.42661286455405	0.5359995577334734	3				NaN	NaN	0	NaN	1330	3002	4331
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4335	17.355	NaN	1296	30	0	746.38	0.106			+	9460	EKNIVHQY	8	41	515.7684125842553	1029.5222722353105	2	515.7689208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EKNIVHQY_	REV__CTPS2|p.L488Pfs*6|1|0.03|ENSG00000047230|chrX:16617235-16617236|-/A|frameshift_variant;REV__ENSG00000047230|ENST00000359276|CTPS2	17.364965105453717	0.7956685240855921	3				NaN	NaN	0	NaN	1331	3002	4331
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4336	17.357	NaN	1187.4	30	0	250.75	0.106			+	11256	FIMCLILNLK	10	42	604.3505188851375	1206.6864848370749	2	604.3497314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FIMCLILNLK_	REV__ENSG00000154263|ENST00000690296|ABCA10;REV__ENST00000519732.5_1_17:67144970-67171813:-|nuORF;REV__ENST00000522406.5_1_17:67144970-67178294:-|nuORF;REV__nc|ENSG00000154263|Q8WWZ4-2|ABCA10	49.536043120802724	0.461275219792494	3				NaN	NaN	0	NaN	1332	3002	4331
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4337	17.359	NaN	1416.3	30	0	373.79	0.106			+	41018	SVGTLVHVGA	10	46	470.26672257047954	938.5188922077591	2	470.7655944824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVGTLVHVGA_	REV__ENST00000496704.1_1_2:130899553-130900555:-|nuORF	51.33545320467046	0.4446945571623749	3				NaN	NaN	0	NaN	1333	3002	4331
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4338	17.36	NaN	782.82	30	0	205.01	0.037			+	21488	KNKLPNRYI	9	37	573.3446655273438	NaN	0	573.3446655273438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KNKLPNRYI_	REV__ENSG00000172489|ENST00000313033|OR5T3;REV__nc|ENSG00000172489|Q8NGG3|OR5T3;REV__OR5T3|p.K120Sfs*36|1|0.04|ENSG00000172489|chr11:56252557-56252558|-/GT|frameshift_variant;REV__OR5T3|p.L184Yfs*7|1|0.09|ENSG00000172489|chr11:56252747-56252747|T/-|frameshift_variant	25.57405402267927	0.3484490411150625	3				NaN	NaN	0	NaN	1334	3002	4331
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4346	17.38	NaN	3026	30	0	596.77	0.214			+	-1	TTALILMWFK	10	46	413.89920223087347	1238.6757772928204	3	413.89862060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_TTALILM(Oxidation (M))WFK_	REV__CLCNKB|p.Y466Mfs*13|1|0.38|ENSG00000184908|chr1:16051802-16051802|G/-|frameshift_variant;REV__ENSG00000184908|ENST00000375679|CLCNKB;REV__ENSG00000186510|ENST00000331433|CLCNKA;REV__nc|ENSG00000184908|P51801-2|CLCNKB;REV__nc|ENSG00000186510|P51800-2|CLCNKA;REV__nc|ENSG00000186510|P51800-3|CLCNKA	27.047317107675042	0.6589519614906109	3				NaN	NaN	0	NaN	1339	3005	4345
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4347	17.384	NaN	3651.4	30	0	482.28	0.106	+			22597	KTTGLIETQ	9	56	495.7775685022967	989.5405840713934	2	495.7786560058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTTGLIETQ_	GNAT3|p.I184L|1|0.44|ENSG00000214415|chr7:80474291-80474291|T/G|missense_variant	85.16082228582465	0.07850854922700509	3				NaN	NaN	0	NaN	1340	3005	4345
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4348	17.386	NaN	2566.2	30	0	361.05	0.032	+			51132	YNKGSGVP	8	45	411.21174445543784	820.4089359776757	2	411.2119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YNKGSGVP_	nc|ENSG00000211639|A0A075B6I1|IGLV4-60	42.396135135203025	0.6414440140393314	3				NaN	NaN	0	NaN	1341	3005	4345
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4354	17.402	NaN	4959.4	30	0	785.66	0.214	+			40054	STNNIAQAR	9	54	487.7540781465214	NaN	0	487.7546691894531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STNNIAQAR_	ENSG00000172380|ENST00000370982|GNG12;GNG12|p.F63Efs*8|1|0.1|ENSG00000172380|chr1:67705483-67705484|-/GAGATTTACCTTC|frameshift_variant	176.44474024533739	0.005964492135656625	3				NaN	NaN	0	NaN	1344	3008	4353
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4355	17.405	NaN	1845.8	30	0	195.51	0.106			+	31807	QPNMHGEKL	9	54	527.2612897178378	1052.5080265024756	2	527.7638549804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QPNMHGEKL_	REV__DST|p.K5076Nfs*24|1|0.31|ENSG00000151914|chr6:56472218-56472218|T/-|frameshift_variant;REV__DST|p.T4428Nfs*23|1|0.12|ENSG00000151914|chr6:56497896-56497897|-/T|frameshift_variant;REV__ENSG00000151914|ENST00000680361|DST;REV__nc|ENSG00000151914|Q03001-9|DST;REV__nc|ENSG00000151914|Q03001|DST	53.351449002276354	0.2690372970092375	3				NaN	NaN	0	NaN	1345	3008	4353
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4356	17.407	NaN	1156.3	30	0	260.88	0.106	+			19022	IWLRSVANL	9	45	536.3183148649987	1070.6220767967973	2	536.3184814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IWLRSVANL_	tr|U7T545|U7T545_FUSNUDUF262domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00305PE=4SV=1	31.529811441608018	0.5085848003137583	3				NaN	NaN	0	NaN	1346	3008	4353
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4357	17.409	NaN	901.47	30	0	136.22	0.038	+			39287	STASEETVQNR	11	49	611.2901346321285	1220.5657163310568	2	611.289794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STASEETVQNR_	ENSG00000075702|ENST00000401500|WDR62;ENST00000378860.8_1_19:36545867-36564559:+|nuORF;ENST00000608676.1_1_19:36545867-36550933:+|nuORF;nc|ENSG00000075702|O43379-2|WDR62;nc|ENSG00000075702|O43379-3|WDR62;nc|ENSG00000075702|O43379|WDR62	66.96192283764107	0.2613103798769313	3				NaN	NaN	0	NaN	1347	3008	4353
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4362	17.423	NaN	3258.2	30	0	785.65	0.214	+			2871	ASAPVTVKR	9	56	464.7823994199601	927.5502459067202	2	464.7817077636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASAPVTVKR_	ENSG00000174579|ENST00000309993|MSL2;MSL2|p.K455Nfs*37|1|0.08|ENSG00000174579|chr3:136151516-136151516|T/-|frameshift_variant;MSL2|p.L557*|1|0.09|ENSG00000174579|chr3:136151211-136151211|A/-|frameshift_variant;nc|ENSG00000174579|Q9HCI7-2|MSL2	41.42661286455405	0.403525789677298	3				NaN	NaN	0	NaN	1349	3011	4361
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4363	17.426	NaN	1856.6	30	0	194.3	0.106	+			32975	REDSQRPGAHL	11	61	633.3212655578153	1264.6279781824305	2	633.3204345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_REDSQRPGAHL_	chr12:54282662-54282800|482|460.96|0.0|25.46|+|ENST00000677249|HNRNPA1,HNRNPA1;ENSG00000135486|ENST00000340913|HNRNPA1;ENSG00000139675|ENST00000357495|HNRNPA1L2;ENST00000391992.3_1_12:9180728-9181528:-|nuORF;ENST00000422644.2_1_X:73693403-73693721:-|nuORF;ENST00000444886.1_1_9:128358162-128358726:+|nuORF;ENST00000457695.2_1_X:100110922-100111255:-|nuORF;ENST00000458678.1_1_1:241083162-241083366:+|nuORF;ENST00000510646.1_1_5:135764749-135765112:+|nuORF;ENST00000546565.1_1_12:93277549-93277891:+|nuORF;nc|ENSG00000135486|P09651-2|HNRNPA1;nc|ENSG00000135486|P09651-3|HNRNPA1	48.18798116849167	0.44590646720473764	3				NaN	NaN	0	NaN	1350	3011	4361
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4364	17.428	NaN	1636.4	30	0	368	0.106			+	16879	HPHAVGGGVVR	11	49	543.3018354182856	1084.589117903371	2	543.3017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HPHAVGGGVVR_	REV__PLG|p.C585G|1|0.35|ENSG00000122194|chr6:160736958-160736958|T/G|missense_variant	36.31764250033197	0.6083289427130232	3				NaN	NaN	0	NaN	1351	3011	4361
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4365	17.43	NaN	1992.2	30	0	220.19	0.106	+			42835	TEEERQKIE	9	58	581.2908969656405	1160.567240998081	2	581.7918701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TEEERQKIE_	ENSG00000135723|ENST00000258201|FHOD1	49.536043120802724	0.308405419312776	3				NaN	NaN	0	NaN	1352	3011	4361
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4366	17.432	NaN	3362.6	30	0	584.85	0.106			+	2851	ASALKRRFE	9	39	359.87753191864033	1076.610766356121	3	360.2112121582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASALKRRFE_	REV__ENST00000531428.1_1_11:17099378-17112888:-|nuORF	25.57405402267927	0.5642445186134241	3				NaN	NaN	0	NaN	1353	3011	4361
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4367	17.434	NaN	902.94	30	0	379.2	0.106				-1	 	0	29	564.3268385535437	563.3195620869436	1	564.3275756835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1354	3011	4361
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4368	17.436	NaN	3391.3	30	0	622.38	0.036	+			45733	VADNRIITL	9	38	338.86969535206396	NaN	0	338.86956787109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VADNRIITL_	RUFY3|p.N303D|1|0.27|ENSG00000018189|chr4:70783103-70783103|A/G|missense_variant	26.69291269510374	0.34280015626154364	3				NaN	NaN	0	NaN	1355	3011	4361
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4376	17.454	NaN	5748.8	30	0	2386.9	0.214	+			41804	SVSRSPVPEK	10	42	362.53722611050466	1084.589848931714	3	362.5364074707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSRSPVPEK_	ENSG00000100650|ENST00000557154|SRSF5;ENST00000554465.5_1_14:70237039-70238175:+|nuORF;ENST00000554929.1_1_14:70237619-70238175:+|nuORF;nc|ENSG00000100650|Q13243-3|SRSF5	38.753607047826485	0.5606299674732264	3				NaN	NaN	0	NaN	1360	3014	4375
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4377	17.457	NaN	885.26	30	0	105.32	0.106	+			33674	RNMDWVSTQLQ	11	39	689.3290377690382	NaN	0	689.3287353515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RNMDWVSTQLQ_	ENSG00000149485|ENST00000350997|FADS1;nc|ENSG00000149485|O60427-2|FADS1;nc|ENSG00000149485|O60427|FADS1	31.634271133179894	0.4244354679066847	3				NaN	NaN	0	NaN	1361	3014	4375
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4378	17.459	NaN	2515.1	30	0	454.63	0.106			+	21589	KPILQFTVI	9	36	353.5572509765625	NaN	0	353.5572509765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KPILQFTVI_	REV__ENSG00000134250|ENST00000256646|NOTCH2	32.81241826257853	0.3119040447479903	3				NaN	NaN	0	NaN	1362	3014	4375
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4379	17.461	NaN	630.94	30	0	58.235	0.106	+			35415	SAQVHIATK	9	40	477.7719421386719	NaN	0	477.7719421386719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SAQVHIATK_	AKAP11|p.C1327Lfs*13|1|0.05|ENSG00000023516|chr13:42302724-42302725|-/CTTCTACTTTATAATC|frameshift_variant;AKAP11|p.F1607Sfs*48|1|0.11|ENSG00000023516|chr13:42303562-42303562|T/-|frameshift_variant;AKAP11|p.H1753Ifs*3|1|0.11|ENSG00000023516|chr13:42308589-42308589|T/-|frameshift_variant;AKAP11|p.N964Mfs*17|1|0.38|ENSG00000023516|chr13:42301633-42301633|A/-|frameshift_variant;AKAP11|p.S919Pfs*33|1|0.11|ENSG00000023516|chr13:42301498-42301498|T/-|frameshift_variant;ENSG00000023516|ENST00000025301|AKAP11	33.921630207806714	0.3063038642147651	3				NaN	NaN	0	NaN	1363	3014	4375
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4380	17.463	NaN	1451.6	30	0	574.1	0.106	+			50270	WRGRLHPR	8	43	539.3129909499655	1076.611428966731	2	539.8145141601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_WRGRLHPR_	ENST00000359518.7_1_11:6486953-6494439:-|nuORF	35.61828744233558	0.6843154725607303	3				NaN	NaN	0	NaN	1364	3014	4375
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4381	17.465	NaN	698.51	30	0	96.004	0.035			+	-1	QVTLHCMPP	9	40	521.2450098294676	NaN	0	521.2437744140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_QVTLHCM(Oxidation (M))PP_	REV__CCNDBP1|p.R305Q|1|0.17|ENSG00000166946|chr15:43192796-43192796|G/A|missense_variant	23.04248740728303	0.3589936788096251	3				NaN	NaN	0	NaN	1365	3014	4375
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4387	17.48	NaN	3303.8	30	0	552.09	0.214	+			68	AAASTLVHK	9	61	449.2620557658643	896.5095585985287	2	449.26177978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAASTLVHK_	ENSG00000115421|ENST00000238714|PAPOLG;ENST00000453839.5_1_2:61002191-61018944:+|nuORF;ENST00000496283.5_1_2:61002191-61021341:+|nuORF;nc|ENSG00000115421|Q9BWT3-2|PAPOLG;PAPOLG|p.R682Kfs*18|2|0.34|ENSG00000115421|chr2:60794759-60794760|-/A|frameshift_variant;PAPOLG|p.T602Lfs*8|1|0.46|ENSG00000115421|chr2:60794000-60794000|C/-|frameshift_variant	138.8255168832474	0.011031062795199845	3				NaN	NaN	0	NaN	1368	3017	4386
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4388	17.484	NaN	2051.4	30	0	341.23	0.106	+			41429	SVNGKVLSK	9	49	466.28215502493134	930.5497571166627	2	466.28253173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVNGKVLSK_	ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2;NOMO1|p.P1102Hfs*42|1|0.36|ENSG00000103512|chr16:14886838-14886838|C/-|frameshift_variant;NOMO1|p.P141Sfs*12|1|0.33|ENSG00000103512|chr16:14846592-14846593|-/AG|frameshift_variant	90.14881205920913	0.06444578693273594	3				NaN	NaN	0	NaN	1369	3017	4386
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4389	17.486	NaN	2593.2	30	0	361.69	0.106	+			40516	STYSSQIRK	9	67	535.287171682776	1068.559790432352	2	535.2865600585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STYSSQIRK_	ENST00000469130.5_1_1:201751782-201763782:+|nuORF;nc|ENSG00000134369|Q8NEY1-2|NAV1;nc|ENSG00000134369|Q8NEY1-6|NAV1;nc|ENSG00000134369|Q8NEY1-7|NAV1	74.1650062923329	0.12277912660386392	3				NaN	NaN	0	NaN	1370	3017	4386
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4390	17.488	NaN	1905.1	30	0	917.85	0.106			+	-1	VCDQSWCRRQS	11	45	741.3239669547144	1480.6333809762286	2	741.323486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_VC(Carbamidomethyl (C))DQSWC(Carbamidomethyl (C))RRQS_	REV__ADAMTS20|p.G1673Wfs*18|1|0.26|ENSG00000173157|chr12:43376632-43376633|-/A|frameshift_variant;REV__ADAMTS20|p.N1722Tfs*17|1|0.48|ENSG00000173157|chr12:43376291-43376291|T/-|frameshift_variant;REV__ENSG00000173157|ENST00000389420|ADAMTS20;REV__nc|ENSG00000173157|P59510|ADAMTS20	22.579656572578934	0.7529490144093228	3				NaN	NaN	0	NaN	1371	3017	4386
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4391	17.49	NaN	8448	30	0	2534.5	0.106	+			3703	ATAALLRHK	9	40	327.5385550241576	979.5938356726728	3	327.53826904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATAALLRHK_	ENSG00000170915|ENST00000442253|PAQR8	24.20275056022122	0.577060078256802	3				NaN	NaN	0	NaN	1372	3017	4386
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4392	17.491	NaN	2136.8	30	0	1092	0.106				-1	CTGCCCCCCAS	11	42	404.76154254859165	NaN	0	404.7616882324219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term),2 Carbamidomethyl (C)	_(Acetyl (Protein N-term))C(Carbamidomethyl (C))TGC(Carbamidomethyl (C))CCCCCAS_	ENST00000562592.5_1_16:57770947-57775680:+|nuORF	1.4187509189679102	0.456735970842152	3				NaN	NaN	0	NaN	1373	3017	4386
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4393	17.493	NaN	2614.5	30	0	330.41	0.037	+			41115	SVISHQHLSK	10	58	568.3155868409298	1134.6166207486594	2	568.3162841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVISHQHLSK_	ENSG00000164749|ENST00000396423|HNF4G;nc|ENSG00000164749|Q14541-2|HNF4G;nc|ENSG00000164749|Q14541|HNF4G	84.81729255234993	0.1607459278640679	3				NaN	NaN	0	NaN	1374	3017	4386
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4400	17.51	NaN	3399.2	30	0	381.11	0.214			+	37214	SKKTMSAKQQ	10	69	576.8053532049325	1151.596153476665	2	576.8053588867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_SKKTM(Oxidation (M))SAKQQ_	REV__LRRC7|p.V1027Sfs*16|1|0.28|ENSG00000033122|chr1:70039010-70039010|A/-|frameshift_variant;REV__LRRC7|p.V1027Sfs*5|2|0.41|ENSG00000033122|chr1:70039009-70039010|-/A|frameshift_variant	60.11826168202944	0.36476464221954025	3				NaN	NaN	0	NaN	1378	3020	4399
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4401	17.513	NaN	5643.4	30	0	1781.4	0.106			+	-1	EDEKMKDAIDQ	11	57	669.2968619024538	1336.5791708717074	2	669.2965087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_EDEKM(Oxidation (M))KDAIDQ_	REV__ENSG00000064651|ENST00000262461|SLC12A2;REV__nc|ENSG00000064651|P55011-3|SLC12A2;REV__SLC12A2|p.P1171Sfs*18|1|0.38|ENSG00000064651|chr5:128186498-128186499|-/TC|frameshift_variant	44.377184641726394	0.49804979881800077	3				NaN	NaN	0	NaN	1379	3020	4399
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4402	17.515	NaN	1732	30	0	750.35	0.106	+			4054	ATDGTFSSK	9	40	457.2178237544931	912.4210945757862	2	457.21746826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATDGTFSSK_	ENSG00000083857|ENST00000441802|FAT1;FAT1|p.N3847Yfs*7|1|0.03|ENSG00000083857|chr4:186601370-186601371|-/TTATA|frameshift_variant;FAT1|p.P3228Lfs*42|1|0.27|ENSG00000083857|chr4:186611556-186611556|G/-|frameshift_variant;FAT1|p.P4313Lfs*36|1|0.34|ENSG00000083857|chr4:186596602-186596602|G/-|frameshift_variant	69.6276240434122	0.14239879520340665	3				NaN	NaN	0	NaN	1380	3020	4399
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4403	17.517	NaN	2375	30	0	673.92	0.106			+	32291	QTNILIDMKE	10	52	602.8162046494349	1203.6178563656697	2	602.8162841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QTNILIDMKE_	REV__ENSG00000240021|ENST00000319416|TEX35;REV__nc|ENSG00000240021|Q5T0J7-2|TEX35;REV__nc|ENSG00000240021|Q5T0J7-3|TEX35;REV__nc|ENSG00000240021|Q5T0J7-4|TEX35;REV__nc|ENSG00000240021|Q5T0J7-5|TEX35;REV__TEX35|p.K110N|1|0.39|ENSG00000240021|chr1:178520425-178520425|G/T|missense_variant	56.632244143249146	0.3964695498866976	3				NaN	NaN	0	NaN	1381	3020	4399
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4404	17.519	NaN	2822.7	30	0	1432.5	0.106			+	-1	LVKKGWFCK	9	30	389.2225352954132	1164.6457764864397	3	389.22216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_LVKKGWFC(Carbamidomethyl (C))K_	REV__SYN2|p.R131W|2|0.19|ENSG00000157152|chr3:12140664-12140664|C/T|missense_variant	25.57405402267927	0.5642445186134241	3				NaN	NaN	0	NaN	1382	3020	4399
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4405	17.52	NaN	2019.4	30	0	250.46	0.106	+			12906	GESGHLAREC	10	56	529.7388543235817	1057.4631557139633	2	529.7391357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GESGHLAREC_	ENSG00000169714|ENST00000422453|CNBP;ENST00000502372.1_1_3:128889298-128890145:-|nuORF;nc|ENSG00000169714|P62633-2|CNBP;nc|ENSG00000169714|P62633-3|CNBP;nc|ENSG00000169714|P62633-4|CNBP;nc|ENSG00000169714|P62633-5|CNBP;nc|ENSG00000169714|P62633-6|CNBP;nc|ENSG00000169714|P62633-7|CNBP;nc|ENSG00000169714|P62633-8|CNBP	45.02220120713402	0.5028680121232791	3				NaN	NaN	0	NaN	1383	3020	4399
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4406	17.522	NaN	556.43	30	0	76.564	0.033			+	7365	DDKSKLVV	8	40	452.260986328125	NaN	0	452.260986328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DDKSKLVV_	REV__ENSG00000163931|ENST00000462138|TKT;REV__ENST00000460343.5_1_3:53261754-53265639:-|nuORF;REV__ENST00000461139.5_1_3:53259774-53265639:-|nuORF;REV__nc|ENSG00000163931|P29401-2|TKT	38.80614096846853	1.7418937515398478	3				NaN	NaN	0	NaN	1384	3020	4399
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4415	17.542	NaN	3395.5	30	0	385.23	0.214	+			19995	KEIEGVTKT	9	58	502.7857478349073	1003.5569427366146	2	502.78515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEIEGVTKT_	ENSG00000131558|ENST00000253861|EXOC4	109.47833844074708	0.029530294723441826	3				NaN	NaN	0	NaN	1390	3023	4414
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4416	17.546	NaN	9792.8	30	0	3089.1	0.106	+			44604	TTDRYIQQK	9	70	384.8721008300781	NaN	0	384.8721008300781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTDRYIQQK_	ENSG00000149480|ENST00000278823|MTA2;MTA2|p.A568Qfs*29|1|0.23|ENSG00000149480|chr11:62594402-62594402|T/-|frameshift_variant;MTA2|p.I556Hfs*8|1|0.29|ENSG00000149480|chr11:62594543-62594544|-/C|frameshift_variant;nc|ENSG00000149480|O94776-2|MTA2	45.02220120713402	0.24099765136254067	3				NaN	NaN	0	NaN	1391	3023	4414
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4417	17.548	NaN	3337.3	30	0	1027.5	0.106	+			40747	SVDGPVSQK	9	57	458.7407425524015	915.466932171603	2	458.7403869628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVDGPVSQK_	ENSG00000119231|ENST00000323460|SENP5;nc|ENSG00000119231|Q96HI0-2|SENP5	78.26377905018397	0.10505600812668463	3				NaN	NaN	0	NaN	1392	3023	4414
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4418	17.55	NaN	3552.5	30	0	880.03	0.106	+			49176	VVMRDPNTK	9	60	530.2850334838051	1058.5555140344102	2	530.2855834960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVMRDPNTK_	chr12:54282662-54282800|482|460.96|0.0|25.46|+|ENST00000677249|HNRNPA1,HNRNPA1;ENSG00000135486|ENST00000340913|HNRNPA1;ENSG00000139675|ENST00000357495|HNRNPA1L2;ENSG00000224578|ENST00000565308|HNRNPA1L3;ENST00000441603.1_1_11:5593122-5593311:-|nuORF;ENST00000452488.1_1_2:41383770-41384067:+|nuORF;ENST00000457695.2_1_X:100110922-100111255:-|nuORF;ENST00000575692.1_1_17:2210089-2210875:+|nuORF;nc|ENSG00000135486|P09651-2|HNRNPA1;nc|ENSG00000135486|P09651-3|HNRNPA1	83.6470233535746	0.08277643980271215	3				NaN	NaN	0	NaN	1393	3023	4414
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4419	17.551	NaN	1141.3	30	0	150.02	0.106				-1	 	0	38	400.71323575695163	NaN	0	400.713623046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1394	3023	4414
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4420	17.553	NaN	1537.9	30	0	183.57	0.035	+			38264	SQNTDMVQK	9	48	525.7478663313336	1049.4811797294672	2	525.2803344726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SQNTDMVQK_	ENSG00000113282|ENST00000411809|CLINT1	51.19269402634007	0.2889735674168909	3				NaN	NaN	0	NaN	1395	3023	4414
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4421	17.554	NaN	2622.6	30	0	1003.1	0.139	+			12102	GACVVRQK	8	52	430.7404647536212	NaN	0	430.7405700683594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GACVVRQK_	ENST00000608354.1_1_22:30642226-30642904:+|nuORF	44.53106598305862	1.7418937515398478	3				NaN	NaN	0	NaN	1396	3023	4414
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4436	17.586	NaN	13074	30	0	2250.4	0.214	+			38265	SQNTDMVQK	9	77	525.7478663313336	1049.4811797294672	2	525.7490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SQNTDMVQK_	ENSG00000113282|ENST00000411809|CLINT1	177.3047273071476	0.0015666121956477066	3				NaN	NaN	0	NaN	1408	3026	4435
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4437	17.59	NaN	1766.9	30	0	345.42	0.106	+			6065	AVMPPGRSR	9	48	485.76648607057336	969.5184192079467	2	485.7668151855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVMPPGRSR_	ENSG00000131037|ENST00000201647|EPS8L1;EPS8L1|p.D510Efs*3|1|0.38|ENSG00000131037|chr19:55086071-55086072|AC/-|frameshift_variant;EPS8L1|p.G206Afs*54|1|0.23|ENSG00000131037|chr19:55081330-55081336|GCGGGGC/-|frameshift_variant;nc|ENSG00000131037|Q8TE68-3|EPS8L1	56.72105179125745	0.24094814563026265	3				NaN	NaN	0	NaN	1409	3026	4435
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4438	17.592	NaN	1234.5	30	0	120.69	0.106	+			29659	PGLRAAAG	8	36	356.7091368741532	711.4037208151065	2	356.70904541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PGLRAAAG_	ENST00000332438.4_1_17:40831559-40832345:-|nuORF	26.79610172149135	0.7524337208463756	3				NaN	NaN	0	NaN	1410	3026	4435
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4439	17.594	NaN	866.15	30	0	97.077	0.035			+	20387	KESTVSTTK	9	40	490.76390224964064	NaN	0	490.7638854980469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KESTVSTTK_	REV__tr|U7SJ85|U7SJ85_FUSNUThioredoxin-disulfidereductaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02144PE=4SV=1	52.936696900407355	0.1864545979552969	3				NaN	NaN	0	NaN	1411	3026	4435
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4446	17.61	NaN	2904.2	30	0	497.43	0.214	+			40061	STNNMAYNK	9	60	521.7350241787311	1041.4554954242622	2	521.7350463867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STNNMAYNK_	ENSG00000163110|ENST00000317968|PDLIM5	129.42129120953632	0.01549634589885217	3				NaN	NaN	0	NaN	1415	3029	4445
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4447	17.613	NaN	1554.8	30	0	328.96	0.106	+			46091	VDAKAQKL	8	48	436.76367664489237	871.5128003565848	2	436.7632751464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VDAKAQKL_	ACLY|p.G297Vfs*31|1|0.32|ENSG00000131473|chr17:41905635-41905635|C/-|frameshift_variant;ENSG00000131473|ENST00000352035|ACLY;nc|ENSG00000131473|P53396-2|ACLY	75.04331003522576	0.3648751570195447	3				NaN	NaN	0	NaN	1416	3029	4445
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4448	17.615	NaN	4983.5	30	0	1555.3	0.106				-1	IGKKALSCLAV	11	54	387.2341324319032	1158.6805678959097	3	387.23388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_IGKKALSC(Carbamidomethyl (C))LAV_	HERV1_I-int_dup2|chr3:34679996-34686397:+|1.0948245018220069|0.0565463038051543|4.28|448.0|217|1|anti-sense	25.125986553469783	0.7262400895305658	3				NaN	NaN	0	NaN	1417	3029	4445
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4449	17.617	NaN	2171.9	30	0	262.75	0.106	+			19259	KAEEVDVTK	9	54	509.77450324357835	1017.5344535539567	2	509.77435302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KAEEVDVTK_	ENSG00000131711|ENST00000296755|MAP1B;MAP1B|p.E2165Gfs*3|1|0.32|ENSG00000131711|chr5:72199841-72199842|-/C|frameshift_variant;MAP1B|p.E871Afs*22|1|0.13|ENSG00000131711|chr5:72195965-72195966|TG/-|frameshift_variant;MAP1B|p.P1789Hfs*34|1|0.31|ENSG00000131711|chr5:72198718-72198718|C/-|frameshift_variant;MAP1B|p.Y2023Afs*214|1|0.03|ENSG00000131711|chr5:72199421-72199422|-/GC|frameshift_variant	93.5975768576971	0.05472259948179787	3				NaN	NaN	0	NaN	1418	3029	4445
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4450	17.619	NaN	1311.4	30	0	554.16	0.033			+	393	AASGAETHL	9	29	428.71182239210793	855.4090918510159	2	428.7109680175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AASGAETHL_	REV__ENST00000570156.6_2_1:228461084-228461204:+|nuORF	24.20275056022122	0.577060078256802	3				NaN	NaN	0	NaN	1419	3029	4445
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4459	17.639	NaN	29730	30	0	4337.2	0.214	+			3714	ATAASSSSLEK	11	90	526.2672614296898	1050.5199699261796	2	526.2673950195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATAASSSSLEK_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENST00000417985.1_1_X:46147855-46148119:-|nuORF;ENST00000418987.2_1_9:103493819-103494230:+|nuORF;ENST00000423183.1_1_3:12112396-12112453:+|nuORF;ENST00000450451.1_1_1:238090483-238090852:+|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2	153.1020116777495	6.534671767362118E-05	3				NaN	NaN	0	NaN	1425	3032	4458
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4460	17.642	NaN	4773.5	30	0	2316.7	0.106	+			14229	GSSSASIVK	9	42	418.2300347876726	834.4455166421452	2	418.2296142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSSSASIVK_	DSG2|p.I845*|1|0.27|ENSG00000046604|chr18:31545914-31545914|A/-|frameshift_variant;ENSG00000046604|ENST00000261590|DSG2	44.377184641726394	0.36891676396732553	3				NaN	NaN	0	NaN	1426	3032	4458
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4461	17.644	NaN	10029	30	0	4664.7	0.106			+	-1	VCDQSWCRRQ	10	69	697.8064286333225	1393.598304333445	2	698.3067016601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_VC(Carbamidomethyl (C))DQSWC(Carbamidomethyl (C))RRQ_	REV__ADAMTS20|p.G1673Wfs*18|1|0.26|ENSG00000173157|chr12:43376632-43376633|-/A|frameshift_variant;REV__ADAMTS20|p.N1722Tfs*17|1|0.48|ENSG00000173157|chr12:43376291-43376291|T/-|frameshift_variant;REV__ADAMTS20|p.Q1532K|1|0.19|ENSG00000173157|chr12:43383836-43383836|G/T|missense_variant;REV__ENSG00000173157|ENST00000389420|ADAMTS20;REV__nc|ENSG00000173157|P59510|ADAMTS20	27.882242232435846	0.6521336255503853	3				NaN	NaN	0	NaN	1427	3032	4458
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4462	17.646	NaN	2217.4	30	0	637.91	0.106				-1	 	0	54	503.7882596242824	1005.5619663153648	2	503.78729248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1428	3032	4458
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4463	17.648	NaN	1715.4	30	0	669.14	0.106			+	-1	SRCKEDEGN	9	45	547.7289384750707	1093.4433240169412	2	547.7291259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_SRC(Carbamidomethyl (C))KEDEGN_	REV__ENSG00000214978|ENST00000399363|GSG1L2	39.252832667884924	0.4290233611298554	3				NaN	NaN	0	NaN	1429	3032	4458
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4464	17.65	NaN	3322	30	0	416.02	0.106				-1	 	0	50	358.73703072691325	715.4595085206265	2	358.7366943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1430	3032	4458
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4465	17.651	NaN	4436	30	0	575.59	0.037	+			31695	QNLLNQAASQP	11	77	592.3076264094002	1182.6006998856003	2	592.30712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QNLLNQAASQP_	ENSG00000198718|ENST00000361462|TOGARAM1;nc|ENSG00000198718|Q9Y4F4|TOGARAM1	70.8162118820467	0.22893521292419713	3				NaN	NaN	0	NaN	1431	3032	4458
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4475	17.673	NaN	20147	30	0	10320	0.214	+			15778	GVTRVTIRK	9	52	343.889223773965	1028.645841922095	3	343.88909912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVTRVTIRK_	ENSG00000196531|ENST00000454682|NACA;ENST00000419462.1_1_8:102381113-102381542:+|nuORF;nc|ENSG00000196531|E9PAV3-2|NACA;nc|ENSG00000196531|Q13765|NACA;nc|ENSG00000228224|Q9BZK3|NACA4P	63.53385203322761	0.18415635464017938	3				NaN	NaN	0	NaN	1438	3035	4474
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4476	17.677	NaN	2472.9	30	0	717.91	0.106	+			13533	GLRSGTYGDR	10	46	541.2741016190743	1080.5336503049484	2	541.274658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GLRSGTYGDR_	ENSG00000116809|ENST00000375743|ZBTB17;nc|ENSG00000116809|Q13105-2|ZBTB17;nc|ENSG00000116809|Q13105-3|ZBTB17	40.77816245573522	0.5419747034533848	3				NaN	NaN	0	NaN	1439	3035	4474
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4477	17.679	NaN	8508.4	30	0	3651	0.106	+			39416	STDQVLHWVV	10	55	395.2074856944645	1182.6006276835935	3	395.2069396972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STDQVLHWVV_	ENSG00000154727|ENST00000400075|GABPA;ENST00000419271.1_1_7:63353684-63354623:+|nuORF	30.317721548370564	0.6322445173429027	3				NaN	NaN	0	NaN	1440	3035	4474
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4478	17.681	NaN	1882.4	30	0	406.02	0.106			+	31664	QNFGEMPQYIE	11	28	678.3011463956417	1354.5877398580833	2	678.802001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QNFGEMPQYIE_	REV__tr|U7SMN6|U7SMN6_FUSNUExtracellularproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01761PE=4SV=1	14.137123925751023	0.8042936413770803	3				NaN	NaN	0	NaN	1441	3035	4474
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4479	17.682	NaN	2512.1	30	0	487.05	0.106			+	8778	EEIGVTRA	8	41	437.73524485541463	873.4559367776293	2	437.7354736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EEIGVTRA_	REV__DNAH12|p.E1339Gfs*6|1|0.27|ENSG00000174844|chr3:57446125-57446126|-/C|frameshift_variant;REV__DNAH12|p.F1712Lfs*4|1|0.34|ENSG00000174844|chr3:57428681-57428681|A/-|frameshift_variant;REV__DNAH12|p.H2653Sfs*22|1|0.24|ENSG00000174844|chr3:57314595-57314596|-/A|frameshift_variant;REV__DNAH12|p.K1023Nfs*9|3|0.34|ENSG00000174844|chr3:57457919-57457919|T/-|frameshift_variant;REV__DNAH12|p.L560*|1|0.37|ENSG00000174844|chr3:57472643-57472643|A/-|frameshift_variant;REV__ENSG00000174844|ENST00000495027|DNAH12;REV__nc|ENSG00000174844|Q6ZR08|DNAH12	25.450171626174864	0.7628259754767981	3				NaN	NaN	0	NaN	1442	3035	4474
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4480	17.684	NaN	1143.4	30	0	344.15	0.036	+			30210	PSRLTVSRK	9	32	348.54876708984375	NaN	0	348.54876708984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PSRLTVSRK_	ENST00000590564.5_1_19:30787074-30787137:+|nuORF	39.252832667884924	0.27938773122138094	3				NaN	NaN	0	NaN	1443	3035	4474
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4491	17.708	NaN	10252	30	0	3489.8	0.214	+			3119	ASGSTTFTK	9	68	450.2274001454857	898.4402473577715	2	450.2268371582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASGSTTFTK_	ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1670Tfs*23|1|0.29|ENSG00000174231|chr17:1659487-1659487|C/-|frameshift_variant	117.81106730687013	0.02252488733980868	3				NaN	NaN	0	NaN	1451	3038	4490
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4492	17.712	NaN	11548	30	0	2076.9	0.106	+			40202	STSCPVVQK	9	69	503.255327862307	1004.496102791414	2	503.2554931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_STSC(Carbamidomethyl (C))PVVQK_	ENSG00000130935|ENST00000253247|NOL11;ENST00000583108.5_1_17:65733963-65734484:+|nuORF	148.04295825190792	0.0073252839830139265	3				NaN	NaN	0	NaN	1452	3038	4490
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4493	17.713	NaN	2815.2	30	0	615.05	0.106	+			16979	HPQTHETAL	9	52	517.2567323989783	1032.4989118647566	2	517.2569580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HPQTHETAL_	ENSG00000107854|ENST00000371627|TNKS2;TNKS2|p.N622Tfs*29|1|0.33|ENSG00000107854|chr10:91842189-91842189|A/-|frameshift_variant	68.78682469695295	0.14603441672067394	3				NaN	NaN	0	NaN	1453	3038	4490
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4494	17.715	NaN	7828.7	30	0	980.85	0.106	+			4059	ATDIPSSQK	9	65	473.7459761914469	945.4773994496938	2	473.74505615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATDIPSSQK_	APC|p.A1296Qfs*9|1|0.88|ENSG00000134982|chr5:112839478-112839478|A/-|frameshift_variant;APC|p.A1305Sfs*10|1|0.24|ENSG00000134982|chr5:112839504-112839505|-/T|frameshift_variant;APC|p.A1351Gfs*3|1|0.81|ENSG00000134982|chr5:112839644-112839645|-/G|frameshift_variant;APC|p.A1446Vfs*27|1|0.38|ENSG00000134982|chr5:112839931-112839931|C/-|frameshift_variant;APC|p.A1492Cfs*22|2|0.29|ENSG00000134982|chr5:112840063-112840064|-/T|frameshift_variant;APC|p.A1492Pfs*15|1|0.69|ENSG00000134982|chr5:112840068-112840068|G/-|frameshift_variant;APC|p.C1249Sfs*16|1|0.59|ENSG00000134982|chr5:112839340-112839340|G/-|frameshift_variant;APC|p.C1387*|1|0.31|ENSG00000134982|chr5:112839749-112839750|-/AGAT|frameshift_variant;APC|p.C1578Mfs*13|1|0.68|ENSG00000134982|chr5:112840323-112840324|-/A|frameshift_variant;APC|p.D1486Ifs*21|2|0.76|ENSG00000134982|chr5:112840049-112840049|T/-|frameshift_variant;APC|p.E1322Rfs*10|1|0.15|ENSG00000134982|chr5:112839556-112839557|-/C|frameshift_variant;APC|p.E1353Nfs*62|1|0.5|ENSG00000134982|chr5:112839649-112839649|T/-|frameshift_variant;APC|p.E1397Gfs*18|1|0.76|ENSG00000134982|chr5:112839784-112839784|A/-|frameshift_variant;APC|p.E1464Vfs*8|2|0.27|ENSG00000134982|chr5:112839979-112839982|AGAG/-|frameshift_variant;APC|p.E1494Kfs*13|1|0.84|ENSG00000134982|chr5:112840073-112840073|G/-|frameshift_variant;APC|p.E1544Nfs*21|1|0.05|ENSG00000134982|chr5:112840220-112840220|T/-|frameshift_variant;APC|p.E1552Qfs*12|1|0.31|ENSG00000134982|chr5:112840247-112840250|AGAG/-|frameshift_variant;APC|p.E1576Kfs*74|1|0.61|ENSG00000134982|chr5:112840319-112840319|A/-|frameshift_variant;APC|p.F1491Lfs*16|1|0.27|ENSG00000134982|chr5:112840064-112840064|T/-|frameshift_variant;APC|p.G1288*|1|0.58|ENSG00000134982|chr5:112839452-112839453|-/AT|frameshift_variant;APC|p.H1490Nfs*25|1|0.21|ENSG00000134982|chr5:112840059-112840060|-/TAAA|frameshift_variant;APC|p.H1490Tfs*24|1|0.23|ENSG00000134982|chr5:112840060-112840061|-/A|frameshift_variant;APC|p.H1490Yfs*18|1|0.48|ENSG00000134982|chr5:112840059-112840060|-/TA|frameshift_variant;APC|p.I1304Mfs*4|1|0.28|ENSG00000134982|chr5:112839506-112839506|A/-|frameshift_variant;APC|p.I1307Rfs*6|1|0.12|ENSG00000134982|chr5:112839511-112839515|AAATA/-|frameshift_variant;APC|p.I1311Lfs*10|1|0.45|ENSG00000134982|chr5:112839524-112839524|G/-|frameshift_variant;APC|p.I1311Rfs*3|1|0.46|ENSG00000134982|chr5:112839526-112839527|TT/-|frameshift_variant;APC|p.I1401Mfs*14|1|0.73|ENSG00000134982|chr5:112839796-112839796|T/-|frameshift_variant;APC|p.I1417Hfs*6|1|0.53|ENSG00000134982|chr5:112839839-112839840|-/G|frameshift_variant;APC|p.I1557*|1|0.43|ENSG00000134982|chr5:112840262-112840263|TA/-|frameshift_variant;APC|p.I1574Yfs*2|1|0.36|ENSG00000134982|chr5:112840312-112840312|A/-|frameshift_variant;APC|p.I1580Lfs*69|1|0.59|ENSG00000134982|chr5:112840330-112840333|TTAT/-|frameshift_variant;APC|p.I1580Nfs*11|1|0.36|ENSG00000134982|chr5:112840331-112840332|-/A|frameshift_variant;APC|p.K1454Lfs*20|1|0.81|ENSG00000134982|chr5:112839952-112839953|-/TT|frameshift_variant;APC|p.L1302Cfs*3|1|0.77|ENSG00000134982|chr5:112839496-112839496|C/-|frameshift_variant;APC|p.L1337Pfs*4|1|0.82|ENSG00000134982|chr5:112839604-112839605|TG/-|frameshift_variant;APC|p.L1488Ffs*17|1|0.27|ENSG00000134982|chr5:112840057-112840063|TATTACA/-|frameshift_variant;APC|p.L1488Yfs*19|2|0.41|ENSG00000134982|chr5:112840055-112840055|T/-|frameshift_variant;APC|p.L1489Kfs*19|1|0.34|ENSG00000134982|chr5:112840058-112840074|ATTACATTTTGCCACGG/-|frameshift_variant;APC|p.L1489Yfs*18|3|0.26|ENSG00000134982|chr5:112840059-112840059|T/-|frameshift_variant;APC|p.M1383Ifs*3|1|0.64|ENSG00000134982|chr5:112839741-112839742|-/T|frameshift_variant;APC|p.M1431Cfs*42|1|0.4|ENSG00000134982|chr5:112839883-112839883|C/-|frameshift_variant;APC|p.N1455Ifs*18|1|0.15|ENSG00000134982|chr5:112839954-112839954|A/-|frameshift_variant;APC|p.N1531Rfs*31|1|0.18|ENSG00000134982|chr5:112840186-112840195|ATGACAATGG/-|frameshift_variant;APC|p.N1535Mfs*30|1|0.28|ENSG00000134982|chr5:112840194-112840194|G/-|frameshift_variant;APC|p.P1319Lfs*2|2|0.32|ENSG00000134982|chr5:112839549-112839549|C/-|frameshift_variant;APC|p.P1319Lfs*3|1|0.27|ENSG00000134982|chr5:112839547-112839548|-/TC|frameshift_variant;APC|p.P1330Qfs*11|1|0.22|ENSG00000134982|chr5:112839583-112839584|CT/-|frameshift_variant;APC|p.P1439Lfs*34|4|0.34|ENSG00000134982|chr5:112839909-112839909|C/-|frameshift_variant;APC|p.P1442Lfs*31|1|0.41|ENSG00000134982|chr5:112839918-112839918|C/-|frameshift_variant;APC|p.P1453Lfs*20|2|0.29|ENSG00000134982|chr5:112839951-112839951|C/-|frameshift_variant;APC|p.Q1429Dfs*45|1|0.42|ENSG00000134982|chr5:112839875-112839876|-/GG|frameshift_variant;APC|p.Q1447Sfs*24|1|0.77|ENSG00000134982|chr5:112839931-112839937|CTCAAAC/-|frameshift_variant;APC|p.R1435Efs*38|1|0.41|ENSG00000134982|chr5:112839897-112839897|A/-|frameshift_variant;APC|p.R1435Lfs*31|1|0.38|ENSG00000134982|chr5:112839896-112839917|CAGAAGTAAAACACCTCCACCA/-|frameshift_variant;APC|p.S1205Tfs*60|1|0.36|ENSG00000134982|chr5:112839208-112839208|G/-|frameshift_variant;APC|p.S1272Ffs*4|1|0.15|ENSG00000134982|chr5:112839403-112839404|-/T|frameshift_variant;APC|p.S1355Ffs*62|1|0.37|ENSG00000134982|chr5:112839653-112839654|-/TTTTT|frameshift_variant;APC|p.S1355Lfs*60|2|0.6|ENSG00000134982|chr5:112839654-112839654|T/-|frameshift_variant;APC|p.S1398Ifs*17|1|0.86|ENSG00000134982|chr5:112839787-112839787|G/-|frameshift_variant;APC|p.S1400*|1|0.45|ENSG00000134982|chr5:112839793-112839793|C/-|frameshift_variant;APC|p.S1403Mfs*13|1|0.05|ENSG00000134982|chr5:112839799-112839818|CCAGCTCCGTTCAGAGTGAA/-|frameshift_variant;APC|p.S1407Vfs*8|1|0.39|ENSG00000134982|chr5:112839812-112839812|G/-|frameshift_variant;APC|p.S1411Rfs*4|1|0.42|ENSG00000134982|chr5:112839827-112839827|T/-|frameshift_variant;APC|p.S1419*|1|0.33|ENSG00000134982|chr5:112839844-112839845|-/TA|frameshift_variant;APC|p.S1421Mfs*52|1|0.67|ENSG00000134982|chr5:112839856-112839856|G/-|frameshift_variant;APC|p.S1421Vfs*52|1|0.51|ENSG00000134982|chr5:112839855-112839855|A/-|frameshift_variant;APC|p.S1436Rfs*38|1|0.42|ENSG00000134982|chr5:112839899-112839900|-/AG|frameshift_variant;APC|p.S1436Vfs*37|1|0.37|ENSG00000134982|chr5:112839899-112839899|A/-|frameshift_variant;APC|p.S1465Rfs*9|3|0.3|ENSG00000134982|chr5:112839978-112839979|-/AG|frameshift_variant;APC|p.S1501Ffs*13|1|0.5|ENSG00000134982|chr5:112840091-112840092|-/T|frameshift_variant;APC|p.S1581Lfs*69|1|0.34|ENSG00000134982|chr5:112840333-112840333|T/-|frameshift_variant;APC|p.T1313Nfs*2|1|0.51|ENSG00000134982|chr5:112839529-112839530|-/A|frameshift_variant;APC|p.T1487Yfs*18|1|0.1|ENSG00000134982|chr5:112840051-112840057|ATACTTT/-|frameshift_variant;APC|p.T1493Rfs*14|2|0.34|ENSG00000134982|chr5:112840069-112840069|C/-|frameshift_variant;APC|p.T1496Kfs*19|1|0.17|ENSG00000134982|chr5:112840075-112840076|-/AAGT|frameshift_variant;APC|p.T1556Lfs*9|1|0.61|ENSG00000134982|chr5:112840255-112840255|A/-|frameshift_variant;APC|p.T1556Nfs*3|11|0.46|ENSG00000134982|chr5:112840254-112840255|-/A|frameshift_variant;APC|p.V1390Ffs*6|1|0.39|ENSG00000134982|chr5:112839757-112839758|-/TTCT|frameshift_variant;APC|p.V1414*|4|0.37|ENSG00000134982|chr5:112839833-112839833|G/-|frameshift_variant;APC|p.V1414Efs*5|1|0.58|ENSG00000134982|chr5:112839835-112839835|T/-|frameshift_variant;ENSG00000134982|ENST00000257430|APC;nc|ENSG00000134982|P25054-2|APC;nc|ENSG00000134982|P25054-3|APC	64.20726635412375	0.17854274437659667	3				NaN	NaN	0	NaN	1454	3038	4490
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4495	17.717	NaN	3138.6	30	0	1102.3	0.106	+			3566	ASTSQAFNK	9	51	477.2384069577134	952.4622609822268	2	477.2383728027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASTSQAFNK_	CLMN|p.H819Mfs*29|1|0.43|ENSG00000165959|chr14:95202894-95202894|G/-|frameshift_variant;CLMN|p.K865Rfs*10|2|0.35|ENSG00000165959|chr14:95196612-95196612|T/-|frameshift_variant;ENSG00000165959|ENST00000298912|CLMN;ENST00000556454.1_1_14:95660863-95677170:-|nuORF	52.936696900407355	0.27249468807391813	3				NaN	NaN	0	NaN	1455	3038	4490
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4496	17.719	NaN	551.67	30	0	43.624	0.038				-1	MKCKPNQTRT	10	42	624.8139038085938	NaN	0	624.8139038085938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))MKCKPNQTRT_	ENSG00000122824|ENST00000356450|NUDT10;ENSG00000196368|ENST00000375992|NUDT11	29.170058357718403	0.40439580130713204	3				NaN	NaN	0	NaN	1456	3038	4490
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4497	17.72	NaN	1859.4	30	0	481.39	0.142			+	18217	INDVRCCSS	9	52	498.7160033835422	995.4174538338845	2	498.71527099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_INDVRCCSS_	REV__ENSG00000141458|ENST00000269228|NPC1;REV__nc|ENSG00000141458|O15118-2|NPC1;REV__NPC1|p.F1207Lfs*35|1|0.33|ENSG00000141458|chr18:23533488-23533488|A/-|frameshift_variant;REV__NPC1|p.G993Efs*4|1|0.22|ENSG00000141458|chr18:23538605-23538605|C/-|frameshift_variant	29.14955571784316	0.5308295550522326	3				NaN	NaN	0	NaN	1457	3038	4490
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4510	17.748	NaN	27154	30	0	3831.3	0.214	+			15428	GTYRDANIK	9	70	519.2726157975765	1036.5306786619528	2	519.2724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTYRDANIK_	ENSG00000112531|ENST00000361752|QKI;nc|ENSG00000112531|Q96PU8-3|QKI;nc|ENSG00000112531|Q96PU8-5|QKI;nc|ENSG00000112531|Q96PU8-6|QKI;nc|ENSG00000112531|Q96PU8-8|QKI;nc|ENSG00000112531|Q96PU8-9|QKI	136.98908636845044	0.011892605960677736	3				NaN	NaN	0	NaN	1467	3041	4509
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4511	17.752	NaN	46705	30	0	20415	0.106				-1	 	0	65	346.517564184785	1036.530863154555	3	346.51727294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1468	3041	4509
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4512	17.754	NaN	11899	30	0	3229.5	0.106	+			48900	VVDNGSGMCK	10	66	533.736774631324	1065.458996329448	2	533.7367553710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_VVDNGSGMC(Carbamidomethyl (C))K_	ACTBL2|p.R29Gfs*7|1|0.37|ENSG00000169067|chr5:57482623-57482623|G/-|frameshift_variant;ENSG00000075624|ENST00000646664|ACTB;ENSG00000169067|ENST00000423391|ACTBL2;ENST00000418351.1_1_15:44282253-44282364:-|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000477812.1_1_7:5569027-5569288:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF	125.71293069911285	0.01926106323661889	3				NaN	NaN	0	NaN	1469	3041	4509
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4513	17.756	NaN	2548.2	30	0	373.49	0.106	+			17403	IAQDHRSSL	9	56	513.7703913016686	1025.5262296701371	2	513.7699584960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IAQDHRSSL_	ARHGEF10|p.E997Gfs*16|1|0.43|ENSG00000104728|chr8:1928644-1928644|A/-|frameshift_variant;ARHGEF10|p.P976Rfs*8|1|0.14|ENSG00000104728|chr8:1928577-1928577|C/-|frameshift_variant;ENSG00000104728|ENST00000349830|ARHGEF10;ENST00000523711.5_1_8:1824717-1874701:+|nuORF;nc|ENSG00000104728|O15013-4|ARHGEF10;nc|ENSG00000104728|O15013-6|ARHGEF10;nc|ENSG00000104728|O15013-7|ARHGEF10;nc|ENSG00000104728|O15013|ARHGEF10	56.43379154798735	0.2433427591689151	3				NaN	NaN	0	NaN	1470	3041	4509
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4514	17.757	NaN	4152.2	30	0	1207.8	0.106	+			4294	ATGGWSSSK	9	58	440.7118843716467	879.4092158100934	2	440.7112731933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATGGWSSSK_	BAHD1|p.P431Lfs*16|1|0.42|ENSG00000140320|chr15:40459754-40459754|C/-|frameshift_variant;ENSG00000140320|ENST00000416165|BAHD1;nc|ENSG00000140320|Q8TBE0-2|BAHD1;nc|ENSG00000140320|Q8TBE0-3|BAHD1	80.45461616416974	0.09558281504443908	3				NaN	NaN	0	NaN	1471	3041	4509
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4515	17.759	NaN	3903.6	30	0	380.2	0.036			+	-1	TGTSPCLKR	9	56	340.514341210545	1018.5211942318351	3	340.51434326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_TGTSPC(Carbamidomethyl (C))LKR_	REV__ENST00000245105.7_1_4:8230068-8238026:+|nuORF	64.20726635412375	0.17854274437659667	3				NaN	NaN	0	NaN	1472	3041	4509
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4522	17.775	NaN	9534	30	0	1206.6	0.214	+			34367	RTQNVLGEK	9	72	522.7936169018527	1043.5726808705053	2	522.7938842773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTQNVLGEK_	ENSG00000149273|ENST00000531188|RPS3;ENST00000407940.1_1_6:7339375-7339741:-|nuORF;ENST00000529173.5_1_11:75110591-75112804:+|nuORF;nc|ENSG00000149273|P23396-2|RPS3	139.38205640894643	0.01076996779551382	3				NaN	NaN	0	NaN	1476	3044	4521
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4523	17.779	NaN	2791.2	30	0	481.16	0.106	+			4295	ATGGWSSSK	9	48	440.7118843716467	879.4092158100934	2	440.7113342285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATGGWSSSK_	BAHD1|p.P431Lfs*16|1|0.42|ENSG00000140320|chr15:40459754-40459754|C/-|frameshift_variant;ENSG00000140320|ENST00000416165|BAHD1;nc|ENSG00000140320|Q8TBE0-2|BAHD1;nc|ENSG00000140320|Q8TBE0-3|BAHD1	51.19269402634007	0.2889735674168909	3				NaN	NaN	0	NaN	1477	3044	4521
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4524	17.781	NaN	1741.7	30	0	282.35	0.106	+			22876	KVLFEDPL	8	45	480.7717935942158	NaN	0	480.7720947265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KVLFEDPL_	ENSG00000149260|ENST00000648180|CAPN5	47.91560031466742	1.7418937515398478	3				NaN	NaN	0	NaN	1478	3044	4521
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4525	17.783	NaN	1373.6	30	0	176.47	0.106	+			19700	KDSGPSSWGTR	11	56	589.2851977744948	1176.5558426157895	2	589.285400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KDSGPSSWGTR_	ENST00000413145.1_1_9:6645977-6669573:+|nuORF	83.6470233535746	0.12478191950840195	3				NaN	NaN	0	NaN	1479	3044	4521
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4526	17.784	NaN	2937.2	30	0	631.45	0.106			+	-1	HHSGTDVD	8	33	455.1887387219761	908.3629245107522	2	455.18756103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))HHSGTDVD_	REV__ENST00000468435.6_1_9:6413336-6413513:+|nuORF	18.324413293986947	0.7971860551947066	3				NaN	NaN	0	NaN	1480	3044	4521
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4527	17.786	NaN	2127.4	30	0	168.72	0.106	+			10566	EYFDPSIV	8	59	485.2299945306787	NaN	0	485.2300109863281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EYFDPSIV_	APOB|p.K4541Sfs*8|1|0.34|ENSG00000084674|chr2:21001800-21001800|T/-|frameshift_variant;APOB|p.R4385H|1|0.33|ENSG00000084674|chr2:21002268-21002268|C/T|missense_variant;ENSG00000084674|ENST00000233242|APOB	40.5726180659479	1.7418937515398478	3				NaN	NaN	0	NaN	1481	3044	4521
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4528	17.788	NaN	4805.5	30	0	1102.6	0.041				-1	 	0	40	706.811848213675	1411.60914349415	2	706.8112182617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1482	3044	4521
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4537	17.808	NaN	4382.1	30	0	875.12	0.214	+			31585	QLSENRKP	8	63	486.2670817917182	NaN	0	486.266845703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QLSENRKP_	ENSG00000078674|ENST00000325083|PCM1;nc|ENSG00000078674|Q15154-2|PCM1;nc|ENSG00000078674|Q15154-3|PCM1;nc|ENSG00000078674|Q15154-4|PCM1;nc|ENSG00000078674|Q15154-5|PCM1;PCM1|p.I260Sfs*14|1|0.44|ENSG00000078674|chr8:17939850-17939850|A/-|frameshift_variant;PCM1|p.K787Nfs*31|2|0.32|ENSG00000078674|chr8:17962067-17962067|A/-|frameshift_variant;PCM1|p.N1992Tfs*15|1|0.25|ENSG00000078674|chr8:18025580-18025580|A/-|frameshift_variant	68.78682469695295	1.7418937515398478	3				NaN	NaN	0	NaN	1488	3047	4536
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4538	17.812	NaN	2389.8	30	0	171.46	0.106			+	-1	KAPMGVLREG	10	60	537.292727778243	1072.570902623286	2	538.7236938476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_KAPM(Oxidation (M))GVLREG_	REV__ENSG00000113013|ENST00000297185|HSPA9;REV__ENST00000506477.5_1_5:137906647-137911007:-|nuORF;REV__ENST00000507097.5_1_5:137893182-137909502:-|nuORF	39.252832667884924	0.5560298534376815	3				NaN	NaN	0	NaN	1489	3047	4536
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4539	17.814	NaN	1670.9	30	0	193.12	0.106			+	21252	KLLARAPPVS	10	65	526.3350983642492	1050.6556437952984	2	526.3353271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KLLARAPPVS_	REV__ENSG00000163904|ENST00000296257|SENP2;REV__SENP2|p.E257Kfs*29|1|0.19|ENSG00000163904|chr3:185611692-185611692|G/-|frameshift_variant;REV__SENP2|p.P433Sfs*17|1|0.08|ENSG00000163904|chr3:185619352-185619353|-/AGTAGAAG|frameshift_variant	66.9202029811203	0.3029018092171124	3				NaN	NaN	0	NaN	1490	3047	4536
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4540	17.815	NaN	3654.1	30	0	1412.9	0.106	+			31481	QLALPLQLR	9	52	351.22577346094323	1050.6554909830297	3	351.22528076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QLALPLQLR_	ENST00000437322.2_1_X:49642981-49643347:-|nuORF	51.19269402634007	0.2889735674168909	3				NaN	NaN	0	NaN	1491	3047	4536
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4541	17.817	NaN	1029.1	30	0	191.07	0.106			+	-1	AILMVVDPH	9	46	505.7720252543803	NaN	0	505.7718811035156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_AILM(Oxidation (M))VVDPH_	REV__ENSG00000110436|ENST00000278379|SLC1A2;REV__nc|ENSG00000110436|P43004-2|SLC1A2;REV__nc|ENSG00000110436|P43004-3|SLC1A2;REV__SLC1A2|p.I412Mfs*78|1|0.06|ENSG00000110436|chr11:35286807-35286808|-/GGTGGAAGAC|frameshift_variant	33.51558372728122	0.30835390848773375	3				NaN	NaN	0	NaN	1492	3047	4536
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4542	17.819	NaN	472.99	30	0	113.23	0.042				-1	LEDMMIEMRRC	11	22	750.3268432617188	NaN	0	750.3268432617188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),Oxidation (M)	_LEDM(Oxidation (M))MIEMRRC(Carbamidomethyl (C))_	ENSG00000162782|ENST00000444136|TDRD5;nc|ENSG00000162782|Q8NAT2|TDRD5	25.57405402267927	0.45144328854727944	3				NaN	NaN	0	NaN	1493	3047	4536
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4543	17.82	NaN	1995.3	30	0	243.69	0.145			+	-1	KPACRAGVIR	10	39	376.55410977283134	1126.640499918694	3	376.5535583496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_KPAC(Carbamidomethyl (C))RAGVIR_	REV__F7|p.G216Afs*17|1|0.16|ENSG00000057593|chr13:113116836-113116836|G/-|frameshift_variant	22.579656572578934	0.6954366826851017	3				NaN	NaN	0	NaN	1494	3047	4536
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4556	17.848	NaN	9714.2	30	0	1502.4	0.214	+			25713	LRNVSTGD	8	51	431.2250019097696	860.4354508863393	2	431.224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LRNVSTGD_	CON__P13645;ENSG00000186395|ENST00000269576|KRT10	82.24051045832904	0.30490469762271794	3				NaN	NaN	0	NaN	1504	3050	4555
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4557	17.852	NaN	47322	30	0	16406	0.106			+	21932	KSAASLHSNL	10	74	343.1892763549175	1026.5459996649527	3	343.18914794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KSAASLHSNL_	REV__ENSG00000180336|ENST00000409122|MEIOC;REV__nc|ENSG00000180336|A2RUB1-1|MEIOC;REV__nc|ENSG00000180336|A2RUB1-2|MEIOC;REV__nc|ENSG00000180336|A2RUB1-5|MEIOC	40.77816245573522	0.5419747034533848	3				NaN	NaN	0	NaN	1505	3050	4555
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4558	17.854	NaN	5978.2	30	0	2540.6	0.106	+			14244	GSSSVAAMK	9	45	419.21075374147006	836.4069545497401	2	419.2100830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GSSSVAAMK_	ENSG00000174021|ENST00000370645|GNG5;GNG5-NMI|1|fusion	47.657333605630114	0.33044192980041115	3				NaN	NaN	0	NaN	1506	3050	4555
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4559	17.856	NaN	1370.8	30	0	177.43	0.106	+			22826	KVGEFSGANK	10	48	518.7747802734375	NaN	0	518.7747802734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KVGEFSGANK_	ENSG00000136810|ENST00000374517|TXN;ENST00000487892.1_1_9:113006439-113007258:-|nuORF;ENST00000510190.1_1_4:77880016-77880280:-|nuORF;nc|ENSG00000136810|P10599-2|TXN	65.46538089061403	0.18964705739380194	3				NaN	NaN	0	NaN	1507	3050	4555
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4560	17.857	NaN	4267.6	30	0	803.03	0.106			+	21722	KQKPQCLQT	9	68	537.292727778243	1072.570902623286	2	538.3274536132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KQKPQCLQT_	REV__ENSG00000023608|ENST00000216294|SNAPC1;REV__SNAPC1|p.D214*|1|0.21|ENSG00000023608|chr14:61776192-61776193|-/T|frameshift_variant;REV__SNAPC1|p.F213Lfs*7|2|0.15|ENSG00000023608|chr14:61776193-61776193|T/-|frameshift_variant	49.536043120802724	0.308405419312776	3				NaN	NaN	0	NaN	1508	3050	4555
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4561	17.859	NaN	1811.9	30	0	196.57	0.106			+	31531	QLKQWADQL	9	56	565.3043823242188	NaN	0	565.3043823242188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QLKQWADQL_	REV__CON__Q7Z794;REV__ENSG00000189182|ENST00000341809|KRT77	41.42661286455405	0.26577678759562784	3				NaN	NaN	0	NaN	1509	3050	4555
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4562	17.861	NaN	6990.9	30	0	812.34	0.033			+	38438	SSALLNKH	8	71	435.24587208086	868.47719122852	2	435.245361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSALLNKH_	REV__ENSG00000143207|ENST00000367669|COP1;REV__nc|ENSG00000143207|Q8NHY2-2|COP1;REV__nc|ENSG00000143207|Q8NHY2-3|COP1;REV__nc|ENSG00000143207|Q8NHY2-4|COP1	90.77665401227738	0.27511901818546464	3				NaN	NaN	0	NaN	1510	3050	4555
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4575	17.888	NaN	6687.7	30	0	1756.1	0.214	+			40714	SVCGKGFSR	9	62	499.2482698242773	996.4819867153547	2	499.24774169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SVC(Carbamidomethyl (C))GKGFSR_	ENSG00000136451|ENST00000581208|VEZF1;ENST00000423931.1_1_3:192873384-192874521:-|nuORF	79.48907831485694	0.09975780661107167	3				NaN	NaN	0	NaN	1520	3053	4574
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4576	17.892	NaN	3163.4	30	0	493.63	0.106			+	29863	PLFDGIFHK	9	66	537.292727778243	1072.570902623286	2	538.8014526367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PLFDGIFHK_	REV__ENSG00000105705|ENST00000247001|SUGP1;REV__ENST00000588731.6_1_19:19387459-19414804:-|nuORF;REV__ENST00000589144.5_1_19:19387459-19413207:-|nuORF;REV__ENST00000592188.1_1_19:19387459-19391209:-|nuORF	29.14955571784316	0.5308295550522326	3				NaN	NaN	0	NaN	1521	3053	4574
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4577	17.894	NaN	2468.2	30	0	837.84	0.106	+			31386	QKIGNQVDQ	9	58	515.2720131248129	NaN	0	515.271728515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QKIGNQVDQ_	ENST00000510345.2_1_4:111337808-111338090:+|nuORF	45.97224482568171	0.23445038899310136	3				NaN	NaN	0	NaN	1522	3053	4574
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4578	17.895	NaN	5010.7	30	0	797.3	0.106	+			1859	AILDKTTNK	9	63	502.29290662383005	1002.5712603144601	2	502.2926330566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AILDKTTNK_	ENSG00000076067|ENST00000262031|RBMS2;ENSG00000153250|ENST00000348849|RBMS1;nc|ENSG00000153250|P29558-2|RBMS1	107.45493779368988	0.031594950556992824	3				NaN	NaN	0	NaN	1523	3053	4574
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4579	17.897	NaN	7681.7	30	0	1459	0.106	+			15886	GYSSKGLSQ	9	57	463.732726951901	925.450900970602	2	463.7320251464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GYSSKGLSQ_	SLC44A4|p.I435S|1|0.34|ENSG00000204385|chr6:31866056-31866056|A/C|missense_variant	52.936696900407355	0.27249468807391813	3				NaN	NaN	0	NaN	1524	3053	4574
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4580	17.899	NaN	5204.2	30	0	1085.8	0.036				-1	 	0	49	356.8893219386778	1067.6461364162335	3	356.8887939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1525	3053	4574
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4581	17.9	NaN	1411.3	30	0	136.89	0.141	+			20882	KIQEEERKA	9	50	565.8115844726562	NaN	0	565.8115844726562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KIQEEERKA_	ENSG00000198399|ENST00000355123|ITSN2;ITSN2|p.A1240Pfs*15|1|0.05|ENSG00000198399|chr2:24217995-24217996|-/AAGGG|frameshift_variant;ITSN2|p.A1583Pfs*86|1|0.25|ENSG00000198399|chr2:24205230-24205230|T/-|frameshift_variant;ITSN2|p.F1478Qfs*12|1|0.3|ENSG00000198399|chr2:24209858-24209859|AA/-|frameshift_variant;ITSN2|p.T790Nfs*11|1|0.43|ENSG00000198399|chr2:24261729-24261730|-/T|frameshift_variant;nc|ENSG00000198399|Q9NZM3-2|ITSN2;nc|ENSG00000198399|Q9NZM3-3|ITSN2;nc|ENSG00000198399|Q9NZM3-4|ITSN2	51.19269402634007	0.19847346126499396	3				NaN	NaN	0	NaN	1526	3053	4574
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4597	17.935	NaN	85015	30	0	25134	0.214	+			4071	ATDKSFVEK	9	93	342.18205563176605	1023.5243374954982	3	342.18182373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATDKSFVEK_	ENSG00000100345|ENST00000216181|MYH9;ENSG00000105357|ENST00000642316|MYH14;ENSG00000133392|ENST00000300036|MYH11;MYH14|p.L1950Sfs*14|1|0.34|ENSG00000105357|chr19:50309646-50309646|C/-|frameshift_variant;MYH14|p.M997*|1|0.19|ENSG00000105357|chr19:50271483-50271483|A/-|frameshift_variant;MYH14|p.R929Gfs*44|1|0.38|ENSG00000105357|chr19:50268237-50268237|G/-|frameshift_variant;MYH9|p.I784*|1|0.07|ENSG00000100345|chr22:36304036-36304036|G/-|frameshift_variant;nc|ENSG00000100345|P35579-2|MYH9;nc|ENSG00000105357|Q7Z406-4|MYH14;nc|ENSG00000105357|Q7Z406-5|MYH14;nc|ENSG00000105357|Q7Z406-6|MYH14;nc|ENSG00000105357|Q7Z406|MYH14;nc|ENSG00000133392|P35749-2|MYH11;nc|ENSG00000133392|P35749-3|MYH11;nc|ENSG00000133392|P35749-4|MYH11	63.53385203322761	0.18415635464017938	3				NaN	NaN	0	NaN	1539	3056	4596
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4598	17.938	NaN	4752	30	0	885.1	0.106	+			35125	SAHNGGSAF	9	52	424.1887610426898	846.3629691521796	2	424.1882019042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAHNGGSAF_	ENSG00000184363|ENST00000331563|PKP3;nc|ENSG00000184363|Q9Y446-2|PKP3;PKP3|p.L464Pfs*224|1|0.46|ENSG00000184363|chr11:400076-400077|-/C|frameshift_variant;PKP3|p.L464Sfs*183|3|0.22|ENSG00000184363|chr11:400077-400077|C/-|frameshift_variant	62.107414245175825	0.1960472003779324	3				NaN	NaN	0	NaN	1540	3056	4596
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4599	17.94	NaN	1986.5	30	0	267.69	0.106			+	11756	FSILYSPTI	9	51	520.7849229407229	1039.5552929482458	2	520.784912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FSILYSPTI_	REV__ENST00000316024.9_2_17:7590934-7591339:+|nuORF	79.71258880314673	0.09879134589249085	3				NaN	NaN	0	NaN	1541	3056	4596
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4600	17.942	NaN	6980.3	30	0	1990.9	0.106	+			49192	VVMRDPQTK	9	59	537.292727778243	1072.570902623286	2	537.2929077148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVMRDPQTK_	ENSG00000170144|ENST00000392524|HNRNPA3;ENST00000437410.2_1_1:54441353-54441674:-|nuORF;ENST00000472163.1_1_3:75263799-75264780:+|nuORF;HNRNPA3|p.K200Rfs*147|1|0.13|ENSG00000170144|chr2:177216544-177216544|A/-|frameshift_variant;HNRNPA3|p.Y267Lfs*2|1|0.62|ENSG00000170144|chr2:177216918-177216919|-/T|frameshift_variant;nc|ENSG00000170144|P51991-2|HNRNPA3	79.48907831485694	0.09975780661107167	3				NaN	NaN	0	NaN	1542	3056	4596
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4601	17.944	NaN	3623.4	30	0	573.8	0.106			+	21711	KQITSHVKK	9	63	534.8314429236168	1067.6483329140335	2	534.8307495117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KQITSHVKK_	REV__ENSG00000068784|ENST00000263736|SRBD1;REV__SRBD1|p.T783Ifs*12|1|0.05|ENSG00000068784|chr2:45413279-45413280|-/CCAAA|frameshift_variant	62.107414245175825	0.1960472003779324	3				NaN	NaN	0	NaN	1543	3056	4596
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4602	17.946	NaN	1165.7	30	0	107.75	0.035	+			19873	KEENRQLK	8	60	522.7936169018527	1043.5726808705053	2	522.7940673828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KEENRQLK_	ENST00000399417.3_1_X:106595227-106595875:-|nuORF	62.107414245175825	0.4809183816468817	3				NaN	NaN	0	NaN	1544	3056	4596
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4603	17.946	NaN	2479.1	30	0	350.02	0.14			+	48344	VTGINSRLVV	10	55	529.3222370165597	1056.6299210999193	2	530.3245849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VTGINSRLVV_	REV__ENSG00000110514|ENST00000706887|MADD;REV__nc|ENSG00000110514|Q8WXG6-2|MADD;REV__nc|ENSG00000110514|Q8WXG6-3|MADD;REV__nc|ENSG00000110514|Q8WXG6-4|MADD;REV__nc|ENSG00000110514|Q8WXG6-5|MADD;REV__nc|ENSG00000110514|Q8WXG6-6|MADD;REV__nc|ENSG00000110514|Q8WXG6-7|MADD;REV__nc|ENSG00000110514|Q8WXG6-8|MADD;REV__nc|ENSG00000110514|Q8WXG6|MADD	39.252832667884924	0.5560298534376815	3				NaN	NaN	0	NaN	1545	3056	4596
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4614	17.972	NaN	8664.2	30	0	4820.8	0.214	+			46713	VGLSFQEVQ	9	52	336.17855459029624	1005.5138343710887	3	336.1783447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VGLSFQEVQ_	ENSG00000197497|ENST00000396424|ZNF665	27.882242232435846	0.5426732730940306	3				NaN	NaN	0	NaN	1553	3059	4613
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4615	17.975	NaN	9575.2	30	0	2115	0.106			+	44510	TSSVSFPK	8	62	426.727070194346	851.4395874554921	2	426.7265319824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TSSVSFPK_	REV__ENSG00000144747|ENST00000398559|TMF1;REV__nc|ENSG00000144747|P82094-2|TMF1	97.47269410471826	0.25484828363392314	3				NaN	NaN	0	NaN	1554	3059	4613
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4616	17.977	NaN	7705.6	30	0	959.15	0.106				-1	 	0	68	477.251084588623	952.487616244046	2	477.2503967285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1555	3059	4613
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4617	17.979	NaN	8588.3	30	0	4280.6	0.106	+			30469	QAEEKAHAF	9	60	515.7514206921659	1029.4882884511317	2	515.7514038085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QAEEKAHAF_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	98.62937762414208	0.04060045538121712	3				NaN	NaN	0	NaN	1556	3059	4613
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4618	17.981	NaN	5473.8	30	0	2141.7	0.106			+	4580	ATLFASASSAV	11	67	512.7696737669679	1023.5247946007358	2	512.7694702148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATLFASASSAV_	REV__ENSG00000140931|ENST00000567572|CMTM3	52.936696900407355	0.3865048210802777	3				NaN	NaN	0	NaN	1557	3059	4613
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4619	17.982	NaN	9006.7	30	0	1441.5	0.106	+			16344	HEKVANGL	8	58	434.23809705439203	866.4616411755841	2	434.23748779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HEKVANGL_	ENSG00000125991|ENST00000348547|ERGIC3;ENST00000488384.1_1_20:34144716-34145272:+|nuORF;nc|ENSG00000125991|Q9Y282-3|ERGIC3	99.37495909608758	0.2510236104623939	3				NaN	NaN	0	NaN	1558	3059	4613
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4620	17.984	NaN	2030.6	30	0	319.68	0.036			+	9761	ENKDTRQNV	9	65	552.2761144029206	1102.537675872641	2	552.2758178710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ENKDTRQNV_	REV__ENSG00000136155|ENST00000349847|SCEL;REV__nc|ENSG00000136155|O95171-2|SCEL;REV__nc|ENSG00000136155|O95171-3|SCEL	60.11826168202944	0.21262886028301267	3				NaN	NaN	0	NaN	1559	3059	4613
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4630	18.006	NaN	10668	30	0	2908.7	0.214	+			35603	SCCPVGCAK	9	63	491.20101182112415	980.3874707090483	2	491.2010803222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_SCC(Carbamidomethyl (C))PVGC(Carbamidomethyl (C))AK_	CON__P67983;ENSG00000125144|ENST00000379811|MT1G;ENSG00000125148|ENST00000245185|MT2A;ENSG00000169688|ENST00000334346|MT1B;ENSG00000187193|ENST00000394485|MT1X;ENSG00000205364|ENST00000379818|MT1M;ENST00000330439.6_1_16:56660742-56660880:+|nuORF;ENST00000562017.1_1_16:56643131-56643263:+|nuORF;ENST00000563985.1_1_16:56642884-56643263:+|nuORF;ENST00000567300.1_1_16:56642646-56643263:+|nuORF;nc|ENSG00000125144|P13640-2|MT1G;nc|ENSG00000169715|P04732|MT1E	93.19546047674547	0.05585629608842056	3				NaN	NaN	0	NaN	1566	3062	4629
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4631	18.01	NaN	9153.8	30	0	2887.9	0.106			+	31482	QLAPLRSQ	8	58	456.766889225824	911.519225518448	2	456.7666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QLAPLRSQ_	REV__ENSG00000130830|ENST00000369534|MPP1;REV__nc|ENSG00000130830|Q00013-2|MPP1;REV__nc|ENSG00000130830|Q00013-3|MPP1	69.6276240434122	0.4100012001731381	3				NaN	NaN	0	NaN	1567	3062	4629
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4632	18.012	NaN	2794.6	30	0	418.19	0.106			+	29633	PGGAALLR	8	56	377.73246913021245	753.4503853272249	2	377.7322082519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PGGAALLR_	REV__ENST00000304222.2_1_17:15848323-15848530:+|nuORF	29.841539824830324	0.7289191502596711	3				NaN	NaN	0	NaN	1568	3062	4629
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4633	18.013	NaN	547.77	30	0	59.433	0.106			+	29317	NYQLRLNEA	9	33	560.7932739257812	NaN	0	560.7932739257812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NYQLRLNEA_	REV__ENSG00000178409|ENST00000369042|BEND3	28.081489160057373	0.33578952234132536	3				NaN	NaN	0	NaN	1569	3062	4629
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4634	18.015	NaN	1367	30	0	229.54	0.106	+			13728	GQAPATTALR	10	50	493.2747497558594	NaN	0	493.2747497558594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GQAPATTALR_	ENSG00000162004|ENST00000345165|CCDC78;ENST00000485091.5_1_16:772680-775160:-|nuORF;nc|ENSG00000162004|A2IDD5|CCDC78	32.81241826257853	0.3924360933802784	3				NaN	NaN	0	NaN	1570	3062	4629
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4635	18.017	NaN	1446.4	30	0	292.48	0.036			+	1667	AGRDKTLAIL	10	42	353.2173286060991	1056.6301564184973	3	352.8731384277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AGRDKTLAIL_	REV__ENST00000472379.1_1_10:120863654-120864310:+|nuORF	30.503639358989545	0.6307262373768582	3				NaN	NaN	0	NaN	1571	3062	4629
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4636	18.018	NaN	7869.1	30	0	2570.3	0.137			+	19222	KAAGKVHKNR	10	47	370.2268270994062	NaN	0	370.2267150878906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KAAGKVHKNR_	REV__ENSG00000204700|ENST00000641417|OR2J2;REV__nc|ENSG00000204700|O76002|OR2J2	22.579656572578934	0.4201028297492154	3				NaN	NaN	0	NaN	1572	3062	4629
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4648	18.045	NaN	14513	30	0	3854.9	0.214	+			8876	EERRVKEVV	9	74	572.3279300895834	1142.6413072459668	2	572.3280639648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EERRVKEVV_	ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88813329-88813827:+|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P	69.6276240434122	0.14239879520340665	3				NaN	NaN	0	NaN	1581	3065	4647
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4649	18.048	NaN	27926	30	0	7308.8	0.106	+			30556	QALLWHIVK	9	56	369.89256908838104	NaN	0	369.89251708984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QALLWHIVK_	HSPA9|p.R284W|1|0.29|ENSG00000113013|chr5:138567030-138567030|G/A|missense_variant	31.529811441608018	0.3183796599642538	3				NaN	NaN	0	NaN	1582	3065	4647
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4650	18.05	NaN	5220.1	30	0	1640.9	0.106	+			49303	VVQRVEIHK	9	60	554.3357589368062	1106.6569649404123	2	554.3359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVQRVEIHK_	ENSG00000213977|ENST00000225525|TAX1BP3	69.6276240434122	0.14239879520340665	3				NaN	NaN	0	NaN	1583	3065	4647
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4651	18.052	NaN	9087.5	30	0	1223.8	0.106	+			19228	KAAKELELR	9	66	529.3222370165597	1056.6299210999193	2	529.3224487304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KAAKELELR_	tr|U7SFT1|U7SFT1_FUSNUDNA3'-5'helicaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02223PE=3SV=1	93.1432384553994	0.056003526918089595	3				NaN	NaN	0	NaN	1584	3065	4647
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4652	18.054	NaN	18225	30	0	8364.3	0.106	+			13897	GRGFKKKSV	9	60	350.2138074969163	1047.619593090949	3	350.2135009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))GRGFKKKSV_	ENSG00000198046|ENST00000504904|ZNF667;ZNF667|p.V297_V298insTF|1|0.04|ENSG00000198046|chr19:56442104-56442105|-/AATGTG|inframe_insertion	47.657333605630114	0.33044192980041115	3				NaN	NaN	0	NaN	1585	3065	4647
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4653	18.056	NaN	13945	30	0	2888.5	0.036	+			42258	TAARQTLLLA	10	59	353.2173286060991	1056.6301564184973	3	353.2170104980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TAARQTLLLA_	ENSG00000254656|ENST00000649591|RTL1;RTL1|p.Q1207Rfs*77|4|0.14|ENSG00000254656|chr14:100881170-100881170|G/-|frameshift_variant	26.69291269510374	0.6618461711292317	3				NaN	NaN	0	NaN	1586	3065	4647
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4654	18.056	NaN	1941.1	30	0	388.86	0.14				-1	 	0	52	503.7882596242824	1005.5619663153648	2	503.7875671386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1587	3065	4647
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4662	18.076	NaN	23071	30	0	3317.9	0.214	+			48158	VSYSHIQSK	9	74	524.7746312211501	1047.5347095091001	2	524.7750854492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSYSHIQSK_	ENSG00000047849|ENST00000683076|MAP4;nc|ENSG00000047849|P27816-2|MAP4;nc|ENSG00000047849|P27816-4|MAP4;nc|ENSG00000047849|P27816-6|MAP4;nc|ENSG00000047849|P27816|MAP4	233.56504053126972	4.3686271998660555E-13	3				NaN	NaN	0	NaN	1592	3068	4661
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4663	18.08	NaN	5068.9	30	0	1269.1	0.106	+			5175	ATTGKILEK	9	65	480.79044538173804	959.5663378302761	2	480.7896423339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATTGKILEK_	ENSG00000115827|ENST00000375255|DCAF17;ENST00000468592.5_1_2:172300063-172325523:+|nuORF;ENST00000480855.1_1_2:172299988-172306494:+|nuORF	101.45984612302182	0.0377122763612125	3				NaN	NaN	0	NaN	1593	3068	4661
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4664	18.082	NaN	5091.2	30	0	799.05	0.106	+			15132	GTSDGRILK	9	59	473.76987535930675	945.5251977854135	2	473.7691345214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTSDGRILK_	ENSG00000196576|ENST00000359337|PLXNB2;PLXNB2|p.G872Vfs*42|1|0.08|ENSG00000196576|chr22:50283401-50283401|C/-|frameshift_variant;PLXNB2|p.L1362Rfs*32|1|0.1|ENSG00000196576|chr22:50280578-50280579|CA/-|frameshift_variant;PLXNB2|p.V873Cfs*66|1|0.2|ENSG00000196576|chr22:50283400-50283401|-/C|frameshift_variant;PLXNB2|p.V928Cfs*3|1|0.71|ENSG00000196576|chr22:50283084-50283084|C/-|frameshift_variant	115.49404669440601	0.023927554121326553	3				NaN	NaN	0	NaN	1594	3068	4661
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4665	18.084	NaN	33805	30	0	10570	0.106	+			29416	PAYQNLSQK	9	78	350.185789237614	1047.535538313042	3	350.185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PAYQNLSQK_	ENSG00000228075|ENST00000585477|BOD1L2	56.72105179125745	0.24094814563026265	3				NaN	NaN	0	NaN	1595	3068	4661
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4666	18.085	NaN	3529.4	30	0	749.07	0.106	+			4767	ATNDSVVADK	10	61	510.25420280045404	1018.4938526677081	2	510.254150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATNDSVVADK_	ENSG00000205220|ENST00000358514|PSMB10;ENST00000575556.1_1_16:67970119-67970555:-|nuORF	144.69833601371718	0.009501412318172059	3				NaN	NaN	0	NaN	1596	3068	4661
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4667	18.087	NaN	1743.1	30	0	289.8	0.106	+			20181	KEKYEKDIAA	10	51	597.8225302475973	1193.6305075619946	2	597.822509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KEKYEKDIAA_	ENSG00000164104|ENST00000296503|HMGB2;ENSG00000189403|ENST00000341423|HMGB1;ENST00000502313.1_1_5:77940194-77940227:-|nuORF;ENST00000522557.1_1_20:56063450-56063633:-|nuORF;nc|ENSG00000124097|B2RPK0|HMGB1P1	53.59686742100583	0.4240759338601513	3				NaN	NaN	0	NaN	1597	3068	4661
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4668	18.089	NaN	2510	30	0	444.05	0.032			+	42699	TDAGSGAHL	9	51	414.6963055489891	827.3780581647782	2	414.6958312988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TDAGSGAHL_	REV__ENSG00000102763|ENST00000379310|VWA8;REV__nc|ENSG00000102763|A3KMH1-2|VWA8;REV__VWA8|p.D1438Ifs*16|1|0.27|ENSG00000102763|chr13:41685063-41685063|T/-|frameshift_variant;REV__VWA8|p.G1575Efs*53|1|0.25|ENSG00000102763|chr13:41611729-41611729|C/-|frameshift_variant;REV__VWA8|p.L359*|1|0.4|ENSG00000102763|chr13:41883391-41883391|A/-|frameshift_variant;REV__VWA8|p.N701Kfs*12|1|0.16|ENSG00000102763|chr13:41787504-41787505|-/T|frameshift_variant;REV__VWA8|p.N866Kfs*18|1|0.45|ENSG00000102763|chr13:41729582-41729583|-/T|frameshift_variant;REV__VWA8|p.T1319Kfs*27|1|0.09|ENSG00000102763|chr13:41690186-41690186|G/-|frameshift_variant	47.91560031466742	0.327412564698279	3				NaN	NaN	0	NaN	1598	3068	4661
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4676	18.107	NaN	5122.6	30	0	584.65	0.214			+	9065	EGGKLLGMLL	10	77	515.8036880596876	NaN	0	515.8038330078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EGGKLLGMLL_	REV__ENST00000396987.7_1_8:41479072-41479165:+|nuORF	64.20726635412375	0.1999210135493042	3				NaN	NaN	0	NaN	1603	3071	4675
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4677	18.111	NaN	1638.7	30	0	574.67	0.106				-1	SCPVLLIFMR	10	27	398.8834533691406	NaN	0	398.8834533691406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_SCPVLLIFM(Oxidation (M))R_	STK17B|p.R92Vfs*17|1|0.23|ENSG00000081320|chr2:196156500-196156500|G/-|frameshift_variant	21.68575002086885	0.4201028297492154	3				NaN	NaN	0	NaN	1604	3071	4675
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4678	18.113	NaN	2286.2	30	0	400.17	0.106				-1	SMCITEID	8	50	464.1938599512432	926.3731669692864	2	464.19317626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_SM(Oxidation (M))CITEID_	TGFBR1|p.A73T|1|0.17|ENSG00000106799|chr9:99128974-99128974|G/A|missense_variant	33.51558372728122	0.7005509609380386	3				NaN	NaN	0	NaN	1605	3071	4675
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4679	18.114	NaN	1619.7	30	0	299.35	0.106	+			37111	SISSPQPGK	9	44	450.7429473652507	899.4713417973014	2	450.74267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SISSPQPGK_	ENSG00000136279|ENST00000448521|DBNL;nc|ENSG00000136279|Q9UJU6-2|DBNL;nc|ENSG00000136279|Q9UJU6-3|DBNL;nc|ENSG00000136279|Q9UJU6-4|DBNL;nc|ENSG00000136279|Q9UJU6-5|DBNL;nc|ENSG00000136279|Q9UJU6-6|DBNL	47.657333605630114	0.33044192980041115	3				NaN	NaN	0	NaN	1606	3071	4675
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4680	18.116	NaN	1526.4	30	0	393.19	0.106	+			8488	EASLQAVPPSN	11	42	556.7838101742548	NaN	0	556.7844848632812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EASLQAVPPSN_	ENSG00000242866|ENST00000450892|STRC;nc|ENSG00000290691|A6NGW2|STRCP1;STRC|p.V1549Gfs*8|1|0.04|ENSG00000242866|chr15:43601451-43601452|-/CAGAC|frameshift_variant	26.063383197487333	0.44926255568796863	3				NaN	NaN	0	NaN	1607	3071	4675
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4681	18.118	NaN	1615.1	30	0	291.17	0.039	+			29050	NTFLLLFHIF	10	41	422.2398986816406	NaN	0	422.2398986816406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NTFLLLFHIF_	nc|ENSG00000235818|Q8TDU5|VN1R17P	27.047317107675042	0.41136583337917604	3				NaN	NaN	0	NaN	1608	3071	4675
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4682	18.119	NaN	1192.4	30	0	126.67	0.139			+	-1	RLAGRPGPM	9	44	485.76648607057336	969.5184192079467	2	485.7662353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_RLAGRPGPM(Oxidation (M))_	REV__ENST00000468844.1_1_X:118925076-118925472:-|nuORF	25.450171626174864	0.5654022654467333	3				NaN	NaN	0	NaN	1609	3071	4675
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4690	18.14	NaN	2266.2	30	0	514.41	0.214	+			22044	KSIQSGPLK	9	54	479.29033301921305	956.5661131052261	2	479.28948974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSIQSGPLK_	ENSG00000132305|ENST00000410111|IMMT;ENST00000474969.5_1_2:86385703-86422514:-|nuORF;ENST00000486633.1_1_2:86400704-86422514:-|nuORF;nc|ENSG00000132305|Q16891-2|IMMT;nc|ENSG00000132305|Q16891-3|IMMT;nc|ENSG00000132305|Q16891-4|IMMT	66.96192283764107	0.15557981141143568	3				NaN	NaN	0	NaN	1614	3074	4689
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4691	18.144	NaN	5145.7	30	0	314.84	0.106	+			20805	KIEDKIEKL	9	68	558.3382506870522	1114.6619484409043	2	558.33837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KIEDKIEKL_	tr|U7T3Y5|U7T3Y5_FUSNURibosomematurationfactorRimPOS=FusobacteriumnucleatumCTI-5OX=1316586GN=rimPPE=3SV=1	72.87924865735499	0.12833875048249987	3				NaN	NaN	0	NaN	1615	3074	4689
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4692	18.146	NaN	1753.9	30	0	711.13	0.036	+			31827	QPRAQDHPL	9	46	531.2787725201338	1060.5429921070674	2	531.278076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QPRAQDHPL_	ENST00000382734.9_1_22:25851689-25853254:+|nuORF	68.78682469695295	0.14603441672067394	3				NaN	NaN	0	NaN	1616	3074	4689
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4698	18.162	NaN	51249	30	0	15085	0.214				-1	 	0	80	474.26198809731534	946.5094232614307	2	474.2611999511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1619	3077	4697
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4699	18.165	NaN	12533	30	0	2378.3	0.106	+			28889	NQGQQQNME	9	81	538.723771257956	1075.4329895827118	2	538.7236938476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NQGQQQNME_	ENSG00000270647|ENST00000605844|TAF15;nc|ENSG00000270647|Q92804-2|TAF15;TAF15|p.E285Rfs*41|1|0.28|ENSG00000270647|chr17:35838489-35838489|G/-|frameshift_variant;TAF15|p.Y531Lfs*56|1|0.31|ENSG00000270647|chr17:35844881-35844882|-/G|frameshift_variant	68.78682469695295	0.14603441672067394	3				NaN	NaN	0	NaN	1620	3077	4697
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4700	18.167	NaN	5382	30	0	514.09	0.106	+			13779	GQGVNNVPK	9	58	456.74880995556975	911.4830669779395	2	456.7482604980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GQGVNNVPK_	ENSG00000179119|ENST00000336349|SPTY2D1;ENST00000536336.5_1_11:18633859-18655855:-|nuORF;nc|ENSG00000179119|Q68D10-2|SPTY2D1;nc|ENSG00000179119|Q68D10-3|SPTY2D1;SPTY2D1|p.P485Rfs*12|1|0.3|ENSG00000179119|chr11:18614820-18614820|G/-|frameshift_variant	79.45101966838831	0.09992237243120712	3				NaN	NaN	0	NaN	1621	3077	4697
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4701	18.169	NaN	5007.7	30	0	292.26	0.106	+			49542	VYAQKHQQL	9	74	557.8042462506812	1113.5939395681623	2	557.8043212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VYAQKHQQL_	ENSG00000197323|ENST00000358465|TRIM33;nc|ENSG00000197323|Q9UPN9-2|TRIM33;TRIM33|p.L700Efs*5|1|0.07|ENSG00000197323|chr1:114410281-114410282|-/CAGAATTCTCC|frameshift_variant	93.19546047674547	0.05585629608842056	3				NaN	NaN	0	NaN	1622	3077	4697
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4702	18.171	NaN	2435.7	30	0	636.87	0.106	+			43825	TLRSITSPLV	10	61	543.8296804707641	1085.644808008328	2	543.8302612304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TLRSITSPLV_	ENSG00000142731|ENST00000270861|PLK4;nc|ENSG00000142731|O00444-2|PLK4;nc|ENSG00000142731|O00444-3|PLK4	45.97224482568171	0.49411383603842696	3				NaN	NaN	0	NaN	1623	3077	4697
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4703	18.173	NaN	5668.8	30	0	1533.9	0.106			+	45741	VADRQVMH	8	57	486.2407148856779	970.4668768381558	2	486.2401123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_VADRQVM(Oxidation (M))H_	REV__nc|ENSG00000079785|Q92499-2|DDX1	45.9519527083369	0.6193794311207887	3				NaN	NaN	0	NaN	1624	3077	4697
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4704	18.174	NaN	1163	30	0	156.37	0.033			+	2255	ALVALVLW	8	40	442.78193715116726	NaN	0	442.7818298339844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ALVALVLW_	REV__ENSG00000273079|ENST00000609686|GRIN2B;REV__GRIN2B|p.K488Nfs*16|1|0.06|ENSG00000273079|chr12:13615529-13615530|-/CTTCTTCTAAATATAAG|frameshift_variant	54.89457262308372	1.7418937515398478	3				NaN	NaN	0	NaN	1625	3077	4697
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4710	18.19	NaN	2018.3	30	0	426.22	0.214	+			5910	AVLDKVKTK	9	51	501.32192373124303	1000.6292945292861	2	501.32135009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVLDKVKTK_	ENSG00000051382|ENST00000674063|PIK3CB;PIK3CB|p.T930Lfs*62|1|0.47|ENSG00000051382|chr3:138663914-138663914|T/-|frameshift_variant	112.41091882917199	0.026537921851008135	3				NaN	NaN	0	NaN	1628	3080	4709
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4711	18.194	NaN	3026.9	30	0	664.85	0.106	+			29757	PHSPVASG	8	40	376.1906280025589	750.3667030719179	2	376.1903381347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PHSPVASG_	ENST00000411463.2_2_8:23146028-23146572:+|nuORF	28.2542754592877	0.7411748056684583	3				NaN	NaN	0	NaN	1629	3080	4709
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4712	18.196	NaN	3264	30	0	753.93	0.106	+			4228	ATGDLATSR	9	52	446.230440493735	890.44632805427	2	446.2298889160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATGDLATSR_	ENSG00000167642|ENST00000301244|SPINT2;ENST00000590210.1_1_19:38755508-38778604:+|nuORF;nc|ENSG00000167642|O43291-2|SPINT2	126.24258497203832	0.01742065577488747	3				NaN	NaN	0	NaN	1630	3080	4709
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4713	18.198	NaN	1928.4	30	0	727.94	0.106	+			8741	EEFKTHHEM	9	47	594.2616461858605	1186.508739438521	2	594.7628173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EEFKTHHEM_	ENSG00000029363|ENST00000531224|BCLAF1;ENST00000505813.1_1_5:110284092-110284650:-|nuORF;nc|ENSG00000029363|Q9NYF8-2|BCLAF1;nc|ENSG00000029363|Q9NYF8-3|BCLAF1;nc|ENSG00000029363|Q9NYF8-4|BCLAF1	112.10723106719422	0.02684780151337622	3				NaN	NaN	0	NaN	1631	3080	4709
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4714	18.199	NaN	2874.4	30	0	800.61	0.036	+			4174	ATFKLEKNK	9	35	360.21366910598687	1077.6191779181606	3	360.2129211425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATFKLEKNK_	DHX29|p.D780Tfs*15|1|0.32|ENSG00000067248|chr5:55276356-55276356|T/-|frameshift_variant;DHX29|p.I805Nfs*17|1|0.27|ENSG00000067248|chr5:55276281-55276282|-/C|frameshift_variant;DHX29|p.K807Nfs*16|1|0.19|ENSG00000067248|chr5:55276272-55276272|T/-|frameshift_variant;ENSG00000067248|ENST00000251636|DHX29;ENST00000504778.5_1_5:54579003-54603452:-|nuORF	35.15202426646627	0.4747332964206883	3				NaN	NaN	0	NaN	1632	3080	4709
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4719	18.214	NaN	3559.1	30	0	726.66	0.214	+			1269	AESGRGQVM	9	56	467.724290051051	933.434027168902	2	467.7241516113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AESGRGQVM_	ENSG00000008517|ENST00000525643|IL32;nc|ENSG00000008517|P24001-3|IL32;nc|ENSG00000008517|P24001-4|IL32;nc|ENSG00000008517|P24001|IL32	60.11826168202944	0.21262886028301267	3				NaN	NaN	0	NaN	1634	3083	4718
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4720	18.217	NaN	2093.9	30	0	361.68	0.106	+			31677	QNKEKDTVLG	10	55	566.30413101467	1130.59370909614	2	566.30419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QNKEKDTVLG_	ENSG00000173230|ENST00000614479|GOLGB1;GOLGB1|p.D2495Tfs*21|1|0.22|ENSG00000173230|chr3:121691867-121691867|T/-|frameshift_variant;GOLGB1|p.K2450Rfs*27|1|0.37|ENSG00000173230|chr3:121692000-121692000|T/-|frameshift_variant;GOLGB1|p.Q2186Sfs*19|1|0.31|ENSG00000173230|chr3:121693952-121693952|G/-|frameshift_variant;nc|ENSG00000173230|Q14789-2|GOLGB1;nc|ENSG00000173230|Q14789-3|GOLGB1;nc|ENSG00000173230|Q14789-4|GOLGB1;nc|ENSG00000173230|Q14789|GOLGB1	53.08895987439943	0.42869529153390606	3				NaN	NaN	0	NaN	1635	3083	4718
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4721	18.219	NaN	1702	30	0	250.72	0.106			+	43668	TIYRLCKGM	9	51	542.7857950875363	1083.5570372418724	2	542.7855224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TIYRLCKGM_	REV__ENST00000440353.5_1_2:38177721-38224681:+|nuORF;REV__nc|ENSG00000115841|Q96LZ7-3|RMDN2;REV__nc|ENSG00000115841|Q96LZ7-4|RMDN2	37.15910966729921	0.4535818937225704	3				NaN	NaN	0	NaN	1636	3083	4718
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4722	18.221	NaN	2496.5	30	0	1870.5	0.106	+			27200	MEFGYSSNRP	10	32	396.509896602138	NaN	0	396.5098876953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MEFGYSSNRP_	LRP6|p.S1508R|1|0.05|ENSG00000070018|chr12:12124590-12124590|T/G|missense_variant	22.579656572578934	0.4201028297492154	3				NaN	NaN	0	NaN	1637	3083	4718
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4723	18.223	NaN	2560.1	30	0	216.95	0.106	+			41066	SVIKNVSTK	9	62	488.2956102641513	974.5766675951027	2	488.79644775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVIKNVSTK_	ENSG00000122257|ENST00000319715|RBBP6;nc|ENSG00000122257|Q7Z6E9-2|RBBP6;nc|ENSG00000122257|Q7Z6E9-4|RBBP6;RBBP6|p.D1432Vfs*9|1|0.04|ENSG00000122257|chr16:24571360-24571361|-/TTTTCCCTTTTTC|frameshift_variant;RBBP6|p.T1475Lfs*20|1|0.3|ENSG00000122257|chr16:24571483-24571483|A/-|frameshift_variant	35.15202426646627	0.4747332964206883	3				NaN	NaN	0	NaN	1638	3083	4718
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4724	18.225	NaN	1638	30	0	575.64	0.106				-1	TIHPCKCLL	9	37	362.1924743652344	NaN	0	362.1924743652344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_TIHPC(Carbamidomethyl (C))KCLL_	ENST00000427230.2_1_7:29252007-29252112:+|nuORF	31.529811441608018	0.3183796599642538	3				NaN	NaN	0	NaN	1639	3083	4718
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4725	18.226	NaN	660.44	30	0	94.75	0.035			+	11598	FPSFTQRM	8	46	507.24531062888957	1012.4760683245792	2	507.2442932128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FPSFTQRM_	REV__ENSG00000116001|ENST00000433529|TIA1;REV__ENSG00000151923|ENST00000436547|TIAL1;REV__ENST00000477415.5_1_2:70443338-70451751:-|nuORF;REV__ENST00000482876.5_1_2:70442329-70444102:-|nuORF;REV__ENST00000489822.5_1_10:121336540-121356247:-|nuORF;REV__ENST00000497671.5_1_10:121335179-121339984:-|nuORF;REV__nc|ENSG00000116001|P31483-2|TIA1;REV__nc|ENSG00000151923|Q01085-2|TIAL1	37.15910966729921	0.6739408393984688	3				NaN	NaN	0	NaN	1640	3083	4718
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4733	18.245	NaN	25724	30	0	6179.6	0.214	+			34930	SAAGHVLVK	9	77	441.26408324232904	880.5136135514581	2	441.2635192871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAAGHVLVK_	ENSG00000183508|ENST00000369448|TENT5C	131.03138772384656	0.014687601201650916	3				NaN	NaN	0	NaN	1645	3086	4732
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4734	18.248	NaN	3100.3	30	0	334.42	0.106	+			39363	STCQRFVEK	9	68	577.7848659812836	1153.555179029367	2	577.7845458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_STC(Carbamidomethyl (C))QRFVEK_	ENSG00000181610|ENST00000313608|MRPS23	106.68306549817024	0.032382560583716295	3				NaN	NaN	0	NaN	1646	3086	4732
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4735	18.25	NaN	2289.3	30	0	518.36	0.106	+			33169	RETSQTKVL	9	60	531.3020590625316	1060.5895651918631	2	531.3006591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RETSQTKVL_	ENSG00000042753|ENST00000263270|AP2S1;nc|ENSG00000042753|P53680-2|AP2S1	45.97224482568171	0.3502073465782774	3				NaN	NaN	0	NaN	1647	3086	4732
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4736	18.252	NaN	3850.9	30	0	884.95	0.106	+			45907	VAQGGGRAL	9	49	414.73847470814457	827.4623964830892	2	414.737548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VAQGGGRAL_	ENSG00000140553|ENST00000418476|UNC45A;ENST00000487875.5_1_15:91491769-91496943:+|nuORF;nc|ENSG00000140553|Q9H3U1-2|UNC45A	60.97194046774394	0.20551255781574032	3				NaN	NaN	0	NaN	1648	3086	4732
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4737	18.254	NaN	1517.1	30	0	172.06	0.106	+			16533	HEVKKVTL	8	48	477.2926871997671	952.5708214663342	2	477.2919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HEVKKVTL_	ENSG00000100813|ENST00000605057|ACIN1;nc|ENSG00000100813|Q9UKV3-2|ACIN1;nc|ENSG00000100813|Q9UKV3-3|ACIN1;nc|ENSG00000100813|Q9UKV3-5|ACIN1;nc|ENSG00000100813|Q9UKV3|ACIN1	69.6276240434122	0.4100012001731381	3				NaN	NaN	0	NaN	1649	3086	4732
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4738	18.255	NaN	1597.7	30	0	648.55	0.035				-1	VLLVCVFGL	9	54	510.3021351808487	NaN	0	510.2636413574219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_VLLVC(Carbamidomethyl (C))VFGL_	ENSG00000140015|ENST00000322893|KCNH5;ENSG00000143473|ENST00000271751|KCNH1;ENST00000394964.3_1_14:63416779-63568536:-|nuORF;KCNH1|p.G827Afs*48|1|0.38|ENSG00000143473|chr1:210683771-210683771|C/-|frameshift_variant;nc|ENSG00000140015|Q8NCM2-2|KCNH5;nc|ENSG00000140015|Q8NCM2-3|KCNH5;nc|ENSG00000143473|O95259-2|KCNH1	29.841539824830324	0.32690339240668626	3				NaN	NaN	0	NaN	1650	3086	4732
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4744	18.27	NaN	4751.7	30	0	3506.4	0.214	+			12199	GAPSKTSSL	9	43	424.23000054525664	846.4454481573133	2	424.2294006347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GAPSKTSSL_	ENSG00000198752|ENST00000361246|CDC42BPB	39.252832667884924	0.4290233611298554	3				NaN	NaN	0	NaN	1653	3089	4743
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4745	18.273	NaN	2193.3	30	0	1325.1	0.106			+	35511	SAVAPRKPP	9	44	461.7772058370265	921.539858740853	2	461.7767333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAVAPRKPP_	REV__ENSG00000047849|ENST00000683076|MAP4;REV__MAP4|p.R919Gfs*14|1|0.44|ENSG00000047849|chr3:47870917-47870917|G/-|frameshift_variant;REV__MAP4|p.T960Qfs*35|1|0.3|ENSG00000047849|chr3:47869309-47869309|T/-|frameshift_variant;REV__MAP4|p.V999*|1|0.25|ENSG00000047849|chr3:47867318-47867318|T/-|frameshift_variant;REV__nc|ENSG00000047849|P27816-2|MAP4;REV__nc|ENSG00000047849|P27816-4|MAP4;REV__nc|ENSG00000047849|P27816-5|MAP4;REV__nc|ENSG00000047849|P27816-6|MAP4;REV__nc|ENSG00000047849|P27816|MAP4	27.882242232435846	0.5426732730940306	3				NaN	NaN	0	NaN	1654	3089	4743
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4746	18.275	NaN	2123.2	30	0	737.15	0.106	+			48112	VSTWVAAEI	9	54	488.25948031227665	974.5044076913533	2	488.2589416503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSTWVAAEI_	ENSG00000171798|ENST00000304613|KNDC1	42.396135135203025	0.392153681582562	3				NaN	NaN	0	NaN	1655	3089	4743
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4747	18.277	NaN	2334.7	30	0	522.27	0.106			+	46808	VIAEWRREL	9	51	391.225341796875	NaN	0	391.225341796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VIAEWRREL_	REV__AKAP6|p.E1418Kfs*19|1|0.26|ENSG00000151320|chr14:32822061-32822061|G/-|frameshift_variant;REV__AKAP6|p.N1585Mfs*12|1|0.25|ENSG00000151320|chr14:32822563-32822563|A/-|frameshift_variant;REV__ENSG00000151320|ENST00000280979|AKAP6	25.57405402267927	0.3484490411150625	3				NaN	NaN	0	NaN	1656	3089	4743
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4748	18.279	NaN	905.02	30	0	144.8	0.037			+	-1	AEAAVEGGCNF	11	38	562.7392101520871	1123.4638673709742	2	562.7406616210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_AEAAVEGGC(Carbamidomethyl (C))NF_	REV__ENST00000377227.8_1_5:176334164-176335572:-|nuORF	31.529811441608018	0.6590691889962369	3				NaN	NaN	0	NaN	1657	3089	4743
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4755	18.297	NaN	2898.3	30	0	581.22	0.214			+	-1	SVTISCALSM	10	53	534.757948359265	1067.50134378533	2	534.7574462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SVTISC(Carbamidomethyl (C))ALSM_	REV__CPEB2|p.C544Vfs*31|5|0.34|ENSG00000137449|chr4:15066234-15066234|T/-|frameshift_variant	42.396135135203025	0.5270658956260207	3				NaN	NaN	0	NaN	1661	3092	4754
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4756	18.3	NaN	1316	30	0	151.35	0.106			+	-1	FKLCQRPL	8	48	531.3020590625316	1060.5895651918631	2	531.3029174804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_FKLC(Carbamidomethyl (C))QRPL_	REV__ENSG00000187764|ENST00000422704|SEMA4D	42.47446043378293	0.6409579893742323	3				NaN	NaN	0	NaN	1662	3092	4754
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4757	18.302	NaN	1023.6	30	0	163.6	0.106	+			35734	SDQSFSSLE	9	46	500.21563720703125	NaN	0	500.21563720703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SDQSFSSLE_	ENSG00000164675|ENST00000324698|IQUB;ENST00000483567.1_1_7:123143235-123152394:-|nuORF;IQUB|p.I180Ffs*8|1|0.51|ENSG00000164675|chr7:123503358-123503358|T/-|frameshift_variant;nc|ENSG00000164675|Q8NA54-2|IQUB	42.396135135203025	0.2590952873412954	3				NaN	NaN	0	NaN	1663	3092	4754
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4758	18.304	NaN	1303.3	30	0	274.55	0.036			+	31385	QKGTWLPFP	9	40	537.292727778243	1072.570902623286	2	537.2933959960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QKGTWLPFP_	REV__ENSG00000068654|ENST00000263857|POLR1A	27.882242232435846	0.5426732730940306	3				NaN	NaN	0	NaN	1664	3092	4754
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4764	18.319	NaN	2461.6	30	0	429.95	0.214			+	25869	LSFLLASLL	9	58	488.8048658636701	NaN	0	488.8045654296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSFLLASLL_	REV__nc|ENSG00000188517|Q9BXS0-2|COL25A1	63.30626980617807	0.13521764763214936	3				NaN	NaN	0	NaN	1667	3095	4763
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4765	18.322	NaN	1330.3	30	0	328.23	0.106	+			48174	VTAAVKSQG	9	50	430.7453371084016	NaN	0	430.7451477050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTAAVKSQG_	ENSG00000165476|ENST00000373758|REEP3	47.95952297671804	0.22075498469600283	3				NaN	NaN	0	NaN	1668	3095	4763
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4766	18.324	NaN	2059.4	30	0	217.96	0.106	+			9475	EKRADIQLN	9	60	543.7994471202512	1085.5843413073023	2	543.7990112304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EKRADIQLN_	ENSG00000125734|ENST00000264080|GPR108;ENST00000595108.5_1_19:6733949-6737021:-|nuORF	52.936696900407355	0.27249468807391813	3				NaN	NaN	0	NaN	1669	3095	4763
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4767	18.326	NaN	629.04	30	0	86.859	0.106			+	46798	VHRLLGGG	8	35	404.74278568387444	NaN	0	404.7425842285156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VHRLLGGG_	REV__ENST00000399813.1_1_22:18043396-18070735:+|nuORF	4.6817480819748125	1.7418937515398478	3				NaN	NaN	0	NaN	1670	3095	4763
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4768	18.328	NaN	404.64	30	0	91.86	0.035	+			8015	DTMLHYLV	8	32	496.2507197671943	NaN	0	496.2510070800781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DTMLHYLV_	ENSG00000159082|ENST00000674351|SYNJ1;nc|ENSG00000159082|O43426-4|SYNJ1;nc|ENSG00000159082|O43426-5|SYNJ1;nc|ENSG00000159082|O43426|SYNJ1;SYNJ1|p.L80F|1|0.32|ENSG00000159082|chr21:32726775-32726775|G/A|missense_variant;SYNJ1|p.P1149Rfs*44|1|0.38|ENSG00000159082|chr21:32645710-32645710|C/-|frameshift_variant;SYNJ1|p.Q1248Tfs*14|1|0.36|ENSG00000159082|chr21:32639744-32639745|-/G|frameshift_variant	26.79610172149135	1.7418937515398478	3				NaN	NaN	0	NaN	1671	3095	4763
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4773	18.342	NaN	14747	30	0	2496.9	0.214	+			48593	VTQSEIAQK	9	78	502.2750624871066	1002.5355720410132	2	502.2749328613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTQSEIAQK_	ENSG00000197702|ENST00000334956|PARVA;ENST00000533345.5_1_11:12419899-12534890:+|nuORF	197.79262163027192	4.265587581223485E-05	3				NaN	NaN	0	NaN	1673	3098	4772
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4774	18.345	NaN	2393.4	30	0	307.24	0.106	+			14305	GSYESTLKK	9	51	506.769810712036	1011.5250684908721	2	506.7693176269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSYESTLKK_	ENSG00000184898|ENST00000331426|RBM43	79.71258880314673	0.09879134589249085	3				NaN	NaN	0	NaN	1674	3098	4772
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4775	18.347	NaN	2357.2	30	0	698.71	0.106	+			34384	RTSEIYVHR	9	61	580.8126150766432	1159.6106772200862	2	580.812744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RTSEIYVHR_	ENSG00000089737|ENST00000621632|DDX24;ENST00000555762.1_1_14:94517539-94521656:-|nuORF;nc|ENSG00000089737|Q9GZR7-2|DDX24	99.78786539795823	0.03941834715970116	3				NaN	NaN	0	NaN	1675	3098	4772
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4776	18.349	NaN	5274.4	30	0	1498.4	0.106	+			5122	ATSSTLVSK	9	52	447.2510137950966	892.4874746569932	2	447.2507629394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATSSTLVSK_	ENST00000332782.6_1_12:57640633-57642538:-|nuORF	35.15202426646627	0.4747332964206883	3				NaN	NaN	0	NaN	1676	3098	4772
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4777	18.351	NaN	1529.9	30	0	249.69	0.106			+	12018	FWMLFYLG	8	60	538.7674485328374	1075.5203441324747	2	538.7676391601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FWMLFYLG_	REV__ENST00000411991.5_1_2:103340290-103347510:-|nuORF	33.49298260027079	0.7007254697536482	3				NaN	NaN	0	NaN	1677	3098	4772
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4778	18.353	NaN	1157.8	30	0	187.72	0.106				-1	ASSVKLCR	8	48	460.75335524169253	919.4921575501851	2	460.75347900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_ASSVKLC(Carbamidomethyl (C))R_	ATP2A2|p.I1027Cfs*4|1|0.37|ENSG00000174437|chr12:110346394-110346395|-/TGTGCTGCTCATAATGCCCCTGG|frameshift_variant;ENSG00000174437|ENST00000539276|ATP2A2;nc|ENSG00000174437|P16615-2|ATP2A2;nc|ENSG00000174437|P16615-3|ATP2A2;nc|ENSG00000174437|P16615-4|ATP2A2;nc|ENSG00000174437|P16615-5|ATP2A2	24.20275056022122	0.7724576178584145	3				NaN	NaN	0	NaN	1678	3098	4772
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4779	18.354	NaN	3526.8	30	0	1168.1	0.038	+			23854	LDDNEALIEK	10	41	387.20039119870944	1158.5793441963283	3	387.201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LDDNEALIEK_	ENSG00000100883|ENST00000216774|SRP54;ENST00000553923.1_1_14:35483969-35488318:+|nuORF;nc|ENSG00000100883|P61011-2|SRP54	32.75053402867276	0.6123771875927935	3				NaN	NaN	0	NaN	1679	3098	4772
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4786	18.371	NaN	2190.1	30	0	745.58	0.214	+			3429	ASQKVYAMK	9	50	513.2761283968078	1024.5377038604156	2	513.2759399414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASQKVYAMK_	ENSG00000134318|ENST00000315872|ROCK2;ROCK2|p.K1351Sfs*17|1|0.34|ENSG00000134318|chr2:11192259-11192259|T/-|frameshift_variant;ROCK2|p.S684Afs*5|1|0.34|ENSG00000134318|chr2:11211834-11211834|T/-|frameshift_variant	37.81151784470057	0.4459294069877048	3				NaN	NaN	0	NaN	1683	3101	4785
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4787	18.374	NaN	2018.5	30	0	613.23	0.106				-1	STLTYRMTK	9	54	558.7894690423453	1115.5643851514906	2	558.7898559570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_STLTYRM(Oxidation (M))TK_	ENST00000446662.5_1_16:22466144-22470768:+|nuORF;ENST00000522841.6_1_16:21490806-21495758:-|nuORF	49.536043120802724	0.308405419312776	3				NaN	NaN	0	NaN	1684	3101	4785
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4788	18.376	NaN	1878.6	30	0	449.66	0.106			+	46897	VIQQIAGRL	9	48	499.3116560083922	996.6087590835845	2	499.31134033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VIQQIAGRL_	REV__ENSG00000132554|ENST00000360863|RGS22;REV__ENST00000520923.5_1_8:101051146-101092499:-|nuORF;REV__nc|ENSG00000132554|Q8NE09-2|RGS22;REV__nc|ENSG00000132554|Q8NE09-3|RGS22;REV__RGS22|p.K914Nfs*18|3|0.3|ENSG00000132554|chr8:100002250-100002250|T/-|frameshift_variant	36.446750945000026	0.4619375763483977	3				NaN	NaN	0	NaN	1685	3101	4785
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4789	18.378	NaN	1332	30	0	101.82	0.106			+	42823	TEAVADGVVT	10	53	481.24587196345004	NaN	0	481.2449951171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TEAVADGVVT_	REV__ENSG00000116991|ENST00000674635|SIPA1L2;REV__nc|ENSG00000116991|Q9P2F8-2|SIPA1L2	47.657333605630114	0.3204131577145918	3				NaN	NaN	0	NaN	1686	3101	4785
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4790	18.38	NaN	1376.3	30	0	284.38	0.106	+			9647	ELSAQKARLH	10	54	576.8299289738428	1151.6453050144855	2	576.8279418945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ELSAQKARLH_	ENSG00000264424|ENST00000255381|MYH4	42.33807565288922	0.5276008846745733	3				NaN	NaN	0	NaN	1687	3101	4785
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4791	18.382	NaN	1716.2	30	0	249.48	0.037	+			31438	QKPSQGMTAAD	11	55	567.2667008156146	1132.5188486980292	2	567.7703857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QKPSQGMTAAD_	CRMP1|p.F275Lfs*28|1|0.3|ENSG00000072832|chr4:5839665-5839665|A/-|frameshift_variant;ENSG00000072832|ENST00000324989|CRMP1;ENST00000511535.1_1_4:5823489-5889136:-|nuORF;nc|ENSG00000072832|Q14194|CRMP1	28.081489160057373	0.6952392775027776	3				NaN	NaN	0	NaN	1688	3101	4785
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4797	18.396	NaN	8007.9	30	0	3354.3	0.214			+	50229	WPCQRTRLG	9	49	372.86237148800217	1115.5652850642066	3	372.86212158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WPCQRTRLG_	REV__ENST00000382141.4_1_13:24796978-24797068:+|nuORF	27.882242232435846	0.5426732730940306	3				NaN	NaN	0	NaN	1691	3104	4796
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4798	18.399	NaN	9278.1	30	0	2186.2	0.106				-1	 	0	56	364.20077197263277	1089.5804865180983	3	364.20037841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1692	3104	4796
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4799	18.401	NaN	4723.3	30	0	2136.2	0.106			+	9238	EGTLDKLSLQ	10	38	368.53644695243145	1102.5875114574944	3	368.5360412597656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EGTLDKLSLQ_	REV__nc|ENSG00000138080|Q9Y6C2-2|EMILIN1	18.262085536374414	0.7236521404371882	3				NaN	NaN	0	NaN	1693	3104	4796
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4800	18.403	NaN	1991	30	0	519.78	0.106			+	21118	KKRVFGYRM	9	42	395.56324761009944	1183.6679134304984	3	395.5628356933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KKRVFGYRM_	REV__nc|ENSG00000256040|Q5QFB9|PAPPA-AS1	20.94693142431847	0.6074874384046576	3				NaN	NaN	0	NaN	1694	3104	4796
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4801	18.405	NaN	2668.8	30	0	510.19	0.106	+			46264	VEHEKQRIL	9	46	384.555777714795	NaN	0	384.5556945800781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VEHEKQRIL_	ENSG00000204616|ENST00000376734|TRIM31;nc|ENSG00000204616|Q9BZY9-2|TRIM31	34.172542307311794	0.30503706118289736	3				NaN	NaN	0	NaN	1695	3104	4796
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4802	18.407	NaN	706.48	30	0	114.66	0.106	+			24736	LHREPIQTV	9	38	546.8121948242188	NaN	0	546.8121948242188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LHREPIQTV_	DNAH2|p.I2363Yfs*40|1|0.31|ENSG00000183914|chr17:7792278-7792278|C/-|frameshift_variant;DNAH2|p.K4326Rfs*84|3|0.27|ENSG00000183914|chr17:7832920-7832920|C/-|frameshift_variant;DNAH2|p.Q4263Sfs*13|1|0.12|ENSG00000183914|chr17:7832639-7832639|C/-|frameshift_variant;ENSG00000183914|ENST00000572933|DNAH2;nc|ENSG00000183914|Q9P225-2|DNAH2	20.030474535948922	0.36918787600646324	3				NaN	NaN	0	NaN	1696	3104	4796
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4803	18.409	NaN	2052.5	30	0	377.83	0.036	+			6213	AVQSGHVNLK	10	55	526.7959775411625	1051.577402149125	2	526.7966918945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AVQSGHVNLK_	ENSG00000178913|ENST00000313368|TAF7	51.52775601994872	0.4429225830406686	3				NaN	NaN	0	NaN	1697	3104	4796
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4808	18.423	NaN	2966.4	30	0	1305.1	0.214				-1	 	0	36	334.76424662545634	667.5139403177127	2	334.7640075683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1699	3107	4807
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4809	18.426	NaN	4131.3	30	0	1193.9	0.106			+	15795	GVVHRGVPS	9	59	454.2586699342982	906.5027869353964	2	454.2581787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GVVHRGVPS_	REV__nc|ENSG00000134644|Q14671-4|PUM1	53.351449002276354	0.2690372970092375	3				NaN	NaN	0	NaN	1700	3107	4807
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4810	18.428	NaN	6080.1	30	0	2203.1	0.106	+			14477	GTCGKSLISK	10	62	525.7841316648859	1049.5537103965717	2	525.7842407226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_GTC(Carbamidomethyl (C))GKSLISK_	ENSG00000118322|ENST00000327245|ATP10B	109.82975700811294	0.04850514657194457	3				NaN	NaN	0	NaN	1701	3107	4807
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4811	18.43	NaN	8375.3	30	0	2837.4	0.106	+			14478	GTCGKSLISK	10	60	350.8587934556689	1049.5545509672068	3	350.8585510253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_GTC(Carbamidomethyl (C))GKSLISK_	ENSG00000118322|ENST00000327245|ATP10B	55.721020083383095	0.4047570224426313	3				NaN	NaN	0	NaN	1702	3107	4807
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4812	18.432	NaN	1539.1	30	0	156.37	0.106	+			46265	VEHEKQRIL	9	62	576.3314208984375	NaN	0	576.3314208984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VEHEKQRIL_	ENSG00000204616|ENST00000376734|TRIM31;nc|ENSG00000204616|Q9BZY9-2|TRIM31	91.26522074875469	0.03904588892501484	3				NaN	NaN	0	NaN	1703	3107	4807
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4813	18.434	NaN	1608.4	30	0	317.78	0.106	+			2903	ASAVTQVAK	9	54	437.7537793860834	873.4930058389668	2	437.7537841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASAVTQVAK_	ENSG00000092108|ENST00000458591|SCFD1;nc|ENSG00000092108|Q8WVM8-2|SCFD1;nc|ENSG00000092108|Q8WVM8-3|SCFD1;SCFD1|p.V202Cfs*43|1|0.35|ENSG00000092108|chr14:30643389-30643390|-/T|frameshift_variant	70.8162118820467	0.13725933411854815	3				NaN	NaN	0	NaN	1704	3107	4807
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4814	18.435	NaN	1272.7	30	0	246.62	0.036	+			23353	KYTPPPHHI	9	51	545.2952965820804	1088.5760402309606	2	545.2963256835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KYTPPPHHI_	ENSG00000168653|ENST00000372969|NDUFS5	75.04331003522576	0.118981335847003	3				NaN	NaN	0	NaN	1705	3107	4807
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4822	18.453	NaN	12278	30	0	3364.8	0.214	+			16581	HGANEDAVD	9	57	464.1938599512432	926.3731669692864	2	464.19342041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HGANEDAVD_	ENSG00000198483|ENST00000355594|ANKRD35	56.72105179125745	0.24094814563026265	3				NaN	NaN	0	NaN	1710	3110	4821
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4823	18.457	NaN	4211	30	0	612.69	0.106	+			199	AALEQDLGK	9	56	472.7564518376591	943.4983507421182	2	472.7555236816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AALEQDLGK_	ENSG00000198483|ENST00000355594|ANKRD35	42.86426827375447	0.38666266728046506	3				NaN	NaN	0	NaN	1711	3110	4821
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4824	18.459	NaN	2392.3	30	0	595.82	0.106	+			33618	RLSHNRIQ	8	52	512.2952760595847	1022.5759991859694	2	512.2952270507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RLSHNRIQ_	ENSG00000174130|ENST00000508254|TLR6;nc|ENSG00000174130|Q9Y2C9-2|TLR6;TLR6|p.E667Kfs*65|1|0.4|ENSG00000174130|chr4:38827476-38827476|T/-|frameshift_variant;TLR6|p.N423Tfs*8|1|0.09|ENSG00000174130|chr4:38828206-38828206|T/-|frameshift_variant	45.97224482568171	0.6192535143389125	3				NaN	NaN	0	NaN	1712	3110	4821
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4825	18.461	NaN	1247.1	30	0	158.02	0.033			+	26007	LSKSIDSH	8	49	443.7356773988033	885.4568018644067	2	443.7348327636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSKSIDSH_	REV__tr|U7ST72|U7ST72_FUSNU2,3-bisphosphoglycerate-dependentphosphoglyceratemutaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=gpmAPE=3SV=1	33.51558372728122	0.7005509609380386	3				NaN	NaN	0	NaN	1713	3110	4821
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4833	18.479	NaN	7453.5	30	0	1096.5	0.214	+			47947	VSMGHSISK	9	60	473.24511643834603	944.4756799434921	2	473.244384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSMGHSISK_	ENSG00000186017|ENST00000452939|ZNF566;ZNF566|p.F128Lfs*25|1|0.12|ENSG00000186017|chr19:36449850-36449850|A/-|frameshift_variant;ZNF566|p.P52Q|1|0.3|ENSG00000186017|chr19:36472988-36472988|G/T|missense_variant	114.8945686534367	0.024290463251177924	3				NaN	NaN	0	NaN	1718	3113	4832
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4834	18.482	NaN	2474.3	30	0	391.09	0.106	+			10482	EVRAAGLRAL	10	40	352.54892464966224	1054.6249445491867	3	352.54852294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EVRAAGLRAL_	ENSG00000164327|ENST00000357387|RICTOR;ENST00000510711.5_1_5:38971963-39074479:-|nuORF;ENST00000513566.1_1_5:38981926-39074494:-|nuORF;nc|ENSG00000164327|Q6R327-3|RICTOR;nc|ENSG00000164327|Q6R327-4|RICTOR;RICTOR|p.K678Nfs*14|1|0.2|ENSG00000164327|chr5:38959796-38959796|T/-|frameshift_variant;RICTOR|p.S1495Pfs*13|1|0.05|ENSG00000164327|chr5:38945642-38945643|-/ATTCTGGG|frameshift_variant	59.93077597824379	0.36646980200755325	3				NaN	NaN	0	NaN	1719	3113	4832
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4835	18.484	NaN	2436.6	30	0	296.65	0.106			+	17693	IELKSEKK	8	61	487.79799423052475	973.5814355278495	2	487.7972717285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IELKSEKK_	REV__RFC1|p.R505I|1|0.23|ENSG00000035928|chr4:39309007-39309007|C/A|missense_variant	63.30626980617807	0.4690498839812213	3				NaN	NaN	0	NaN	1720	3113	4832
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4836	18.486	NaN	1268.9	30	0	147.44	0.106	+			15595	GVIKAVDK	8	41	415.26093204531594	828.5073111574319	2	415.2603454589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GVIKAVDK_	ENSG00000156508|ENST00000309268|EEF1A1;ENST00000417549.1_1_13:28789725-28790031:+|nuORF;ENST00000419025.1_1_3:183744159-183744318:-|nuORF;ENST00000436459.2_1_9:135895553-135896258:+|nuORF;ENST00000443590.1_1_2:107313789-107313948:-|nuORF;ENST00000513637.1_1_5:43495177-43495438:-|nuORF;ENST00000559385.1_1_15:53229359-53229566:-|nuORF;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	79.71258880314673	0.32596852995588826	3				NaN	NaN	0	NaN	1721	3113	4832
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4837	18.488	NaN	1921.9	30	0	326.98	0.106	+			40573	SVAEHPLSR	9	51	498.2674583551456	994.5203637770912	2	498.26654052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVAEHPLSR_	ENSG00000142207|ENST00000382751|URB1;URB1|p.R2106W|1|0.08|ENSG00000142207|chr21:32316784-32316784|G/A|missense_variant	41.42661286455405	0.403525789677298	3				NaN	NaN	0	NaN	1722	3113	4832
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4838	18.49	NaN	817.05	30	0	165.95	0.106	+			25133	LLRCRVPSLLL	11	28	428.2734069824219	NaN	0	428.2734069824219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LLRCRVPSLLL_	ENST00000258955.6_1_17:48562280-48562508:+|nuORF	14.086013023434994	0.456735970842152	3				NaN	NaN	0	NaN	1723	3113	4832
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4839	18.491	NaN	807.65	30	0	100.2	0.033			+	1463	AFGPGAMPV	9	39	423.71047294274155	NaN	0	423.7106628417969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AFGPGAMPV_	REV__ENST00000494697.5_1_20:2633306-2634895:+|nuORF	29.841539824830324	0.32690339240668626	3				NaN	NaN	0	NaN	1724	3113	4832
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4846	18.508	NaN	54980	30	0	21101	0.214	+			2982	ASFDKAKLK	9	82	504.29846411061	1006.58237528802	2	504.2978820800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASFDKAKLK_	ENSG00000034510|ENST00000233143|TMSB10	134.7655990226056	0.012935733000282069	3				NaN	NaN	0	NaN	1728	3116	4845
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4847	18.511	NaN	77881	30	0	13135	0.106	+			2988	ASFDKAKLK	9	83	336.53452244120996	1006.5817379238299	3	336.53436279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASFDKAKLK_	ENSG00000034510|ENST00000233143|TMSB10	44.116797842482775	0.37197099687881774	3				NaN	NaN	0	NaN	1729	3116	4845
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4848	18.513	NaN	5990.6	30	0	2673.4	0.106	+			14441	GTATTMVSK	9	49	448.23116237838474	NaN	0	448.23114013671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTATTMVSK_	ENSG00000204217|ENST00000374580|BMPR2	101.25262130126117	0.018912469721856617	3				NaN	NaN	0	NaN	1730	3116	4845
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4849	18.515	NaN	2801.1	30	0	436.91	0.106	+			47858	VSLGHSVSK	9	58	457.2586669921875	NaN	0	457.2586669921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSLGHSVSK_	nc|ENSG00000198182|Q96SK3-3|ZNF607	77.31757898189308	0.08057531075035683	3				NaN	NaN	0	NaN	1731	3116	4845
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4850	18.517	NaN	3188.2	30	0	1088.1	0.106	+			22883	KVLLGRKVN	9	45	342.89794318470615	NaN	0	342.8975830078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KVLLGRKVN_	ENSG00000104517|ENST00000520539|UBR5;nc|ENSG00000104517|O95071-2|UBR5;UBR5|p.F2571Lfs*4|2|0.31|ENSG00000104517|chr8:102262044-102262044|A/-|frameshift_variant	19.996771675451527	0.3693019437812985	3				NaN	NaN	0	NaN	1732	3116	4845
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4851	18.519	NaN	1055.7	30	0	86.616	0.106			+	50271	WRGTKLVLE	9	54	551.3232421875	NaN	0	551.3232421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_WRGTKLVLE_	REV__ENST00000381222.8_2_X:2405587-2405806:-|nuORF;REV__ENST00000515319.6_1_X:2405587-2406978:-|nuORF	56.43379154798735	0.16452882468284893	3				NaN	NaN	0	NaN	1733	3116	4845
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4852	18.52	NaN	4571.2	30	0	1258.6	0.036			+	29716	PHLALSTKVP	10	51	354.88135179545066	NaN	0	354.8817138671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PHLALSTKVP_	REV__ENST00000476287.3_1_6:170714928-170715078:+|nuORF	29.14955571784316	0.4044631218331212	3				NaN	NaN	0	NaN	1734	3116	4845
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4865	18.547	NaN	81536	30	0	35539	0.214	+			36510	SFDKAKLK	8	94	468.77966735627047	935.544781779341	2	468.779052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SFDKAKLK_	CON__P21752;ENSG00000034510|ENST00000233143|TMSB10	127.46168284122857	0.2238874366747666	3				NaN	NaN	0	NaN	1744	3119	4864
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4866	18.55	NaN	38632	30	0	18846	0.106	+			51457	YVGAAKLK	8	79	425.263592133497	848.512631333794	2	425.2629699707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YVGAAKLK_	ENSG00000100938|ENST00000399440|GMPR2;ENSG00000137198|ENST00000259727|GMPR;ENST00000543191.5_1_6:16258277-16295414:+|nuORF;ENST00000544145.1_1_6:16289789-16295414:+|nuORF;nc|ENSG00000100938|Q9P2T1-2|GMPR2;nc|ENSG00000100938|Q9P2T1-3|GMPR2	101.21157088398209	0.2500103534009131	3				NaN	NaN	0	NaN	1745	3119	4864
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4867	18.552	NaN	86985	30	0	24911	0.035				-1	ECLKKALK	8	96	330.5308004403124	988.5705719211373	3	330.86529541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_EC(Carbamidomethyl (C))LKKALK_	ENSG00000069329|ENST00000299138|VPS35;ENST00000568784.6_1_16:46694386-46722246:-|nuORF	69.6276240434122	0.4100012001731381	3				NaN	NaN	0	NaN	1746	3119	4864
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4893	18.608	NaN	4566.3	30	0	920.32	0.214			+	32255	QTLKLTQKA	9	75	515.8167594497615	1029.618965966323	2	515.8165283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QTLKLTQKA_	REV__ENST00000343882.10_1_6:108986065-109001113:+|nuORF	85.16082228582465	0.07850854922700509	3				NaN	NaN	0	NaN	1766	3125	4892
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4894	18.612	NaN	9727.4	30	0	2691.6	0.106	+			3727	ATAAVSSMK	9	60	433.2258949704443	864.4372370076886	2	433.22613525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATAAVSSMK_	ADD3-MXI1|1|fusion;ENSG00000148700|ENST00000356080|ADD3;nc|ENSG00000148700|Q9UEY8-2|ADD3	154.1183686248401	0.005909203230691971	3				NaN	NaN	0	NaN	1767	3125	4892
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4895	18.614	NaN	8069	30	0	2251.5	0.106	+			25900	LSGGCESCKSP	11	71	534.2289790381946	1066.443405143189	2	534.2294311523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSGGCESCKSP_	ENST00000576840.5_1_17:7130280-7131353:-|nuORF	49.536043120802724	0.4274608637932522	3				NaN	NaN	0	NaN	1768	3125	4892
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4896	18.616	NaN	2849.7	30	0	366.78	0.106				-1	CKSCGAHFAN	10	48	547.7280674486487	1093.4415819640974	2	547.7288208007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_CKSC(Carbamidomethyl (C))GAHFAN_	ENSG00000092871|ENST00000394597|RFFL;nc|ENSG00000092871|Q8WZ73-2|RFFL;nc|ENSG00000092871|Q8WZ73-3|RFFL	39.252832667884924	0.5560298534376815	3				NaN	NaN	0	NaN	1769	3125	4892
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4897	18.617	NaN	2084.5	30	0	237.34	0.106	+			4756	ATNAAAQNAIK	11	63	536.7918373338273	1071.5691217344545	2	536.7923583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATNAAAQNAIK_	ENSG00000137076|ENST00000314888|TLN1;ENSG00000171914|ENST00000636159|TLN2;nc|ENSG00000137076|Q9Y490-2|TLN1;TLN1|p.P1628Rfs*20|1|0.44|ENSG00000137076|chr9:35707144-35707144|G/-|frameshift_variant	52.167168403610894	0.39337392184041037	3				NaN	NaN	0	NaN	1770	3125	4892
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4898	18.619	NaN	2319.7	30	0	750.81	0.034				-1	MVIERGLL	8	62	473.77125796467914	NaN	0	473.7713317871094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_M(Oxidation (M))VIERGLL_	ENSG00000115464|ENST00000398571|USP34;nc|ENSG00000115464|Q70CQ2-2|USP34;nc|ENSG00000115464|Q70CQ2-3|USP34;USP34|p.L2716Sfs*30|1|0.05|ENSG00000115464|chr2:61214596-61214597|-/AAGCTGA|frameshift_variant;USP34|p.L3228*|1|0.22|ENSG00000115464|chr2:61190564-61190564|A/-|frameshift_variant	44.116797842482775	1.7418937515398478	3				NaN	NaN	0	NaN	1771	3125	4892
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4899	18.62	NaN	1742.7	30	0	276.4	0.14				-1	KKDCELPR	8	59	523.2754516601562	NaN	0	523.2754516601562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_KKDC(Carbamidomethyl (C))ELPR_	CFI|p.N549Kfs*19|1|0.2|ENSG00000205403|chr4:109740998-109740999|-/T|frameshift_variant;ENSG00000205403|ENST00000394634|CFI	35.61828744233558	1.7418937515398478	3				NaN	NaN	0	NaN	1772	3125	4892
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4905	18.636	NaN	9585.2	30	0	1763.3	0.214	+			4996	ATSAFQTQK	9	69	491.2540123837882	980.4934718343765	2	491.2532043457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSAFQTQK_	ENSG00000139687|ENST00000267163|RB1;RB1|p.V654Cfs*4|1|0.33|ENSG00000139687|chr13:48456343-48456343|A/-|frameshift_variant	186.41076107051632	0.0006524797715399015	3				NaN	NaN	0	NaN	1775	3128	4904
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4906	18.639	NaN	5853.3	30	0	1029.5	0.106	+			9486	EKSCKCEK	8	57	477.7223887271123	NaN	0	477.72235107421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EKSCKCEK_	ENSG00000171817|ENST00000316433|ZNF540;ENST00000589285.1_1_19:38102250-38104161:+|nuORF;nc|ENSG00000171817|Q8NDQ6-2|ZNF540;nc|ENSG00000171817|Q8NDQ6-4|ZNF540;ZNF540|p.F281Lfs*4|4|0.31|ENSG00000171817|chr19:37612117-37612117|T/-|frameshift_variant	74.25504064058377	1.7418937515398478	3				NaN	NaN	0	NaN	1776	3128	4904
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4907	18.641	NaN	4367.5	30	0	1002.8	0.106	+			40093	STNSPVGVSK	10	58	488.2592989654951	974.5040449977902	2	488.25848388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STNSPVGVSK_	ENSG00000165671|ENST00000439151|NSD1;nc|ENSG00000165671|Q96L73-2|NSD1;nc|ENSG00000165671|Q96L73-3|NSD1;NSD1|p.K1753Sfs*10|1|0.17|ENSG00000165671|chr5:177267669-177267669|A/-|frameshift_variant	75.65223720490533	0.23114180991572172	3				NaN	NaN	0	NaN	1777	3128	4904
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4908	18.643	NaN	1735	30	0	230.95	0.106	+			37473	SLKIIFLVM	9	36	355.22586174670306	1062.6557558403092	3	355.22540283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLKIIFLVM_	ENSG00000172215|ENST00000304552|CXCR6	20.94693142431847	0.6074874384046576	3				NaN	NaN	0	NaN	1778	3128	4904
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4909	18.645	NaN	1861.4	30	0	200.9	0.106	+			42280	TADPSHQTM	9	47	494.21408940048707	986.4136258677742	2	494.2134704589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TADPSHQTM_	ENSG00000196141|ENST00000409140|SPATS2L;nc|ENSG00000196141|Q9NUQ6-2|SPATS2L;nc|ENSG00000196141|Q9NUQ6-3|SPATS2L;nc|ENSG00000196141|Q9NUQ6-4|SPATS2L	52.936696900407355	0.27249468807391813	3				NaN	NaN	0	NaN	1779	3128	4904
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4910	18.647	NaN	3655.8	30	0	346.44	0.106	+			1254	AERVEKEKA	9	62	530.2935949796465	1058.572637026093	2	530.2940673828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AERVEKEKA_	BPTF|p.D2844Afs*20|1|0.08|ENSG00000171634|chr17:67959766-67959767|-/C|frameshift_variant;BPTF|p.K2718Nfs*36|3|0.12|ENSG00000171634|chr17:67948150-67948150|A/-|frameshift_variant;ENSG00000171634|ENST00000306378|BPTF;nc|ENSG00000171634|Q12830-4|BPTF;nc|ENSG00000171634|Q12830|BPTF	65.46538089061403	0.16805504838372562	3				NaN	NaN	0	NaN	1780	3128	4904
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4911	18.648	NaN	1459.1	30	0	501.73	0.037				-1	VRTCAPSRPP	10	40	380.8681049661399	NaN	0	380.8680419921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_VRTC(Carbamidomethyl (C))APSRPP_	ENST00000556818.1_1_14:64970443-64970746:+|nuORF	31.634271133179894	0.39630454568332174	3				NaN	NaN	0	NaN	1781	3128	4904
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4917	18.663	NaN	5885.3	30	0	2080.7	0.214	+			4872	ATQAVFQKR	9	36	350.2017942638471	1047.5835533917414	3	350.2013244628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATQAVFQKR_	ENSG00000100949|ENST00000216840|RABGGTA;ENST00000558534.5_1_14:24738716-24740321:-|nuORF;ENST00000560998.5_1_14:24737570-24740321:-|nuORF;RABGGTA|p.P160Lfs*5|1|0.17|ENSG00000100949|chr14:24269643-24269643|G/-|frameshift_variant;RABGGTA|p.Q194Sfs*43|1|0.31|ENSG00000100949|chr14:24269542-24269542|G/-|frameshift_variant	39.252832667884924	0.4290233611298554	3				NaN	NaN	0	NaN	1784	3131	4916
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4918	18.667	NaN	3472.3	30	0	1399.7	0.106	+			7585	DILRLTSQN	9	41	353.86471589519374	1058.5723182857812	3	353.8644714355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DILRLTSQN_	ZNF280B|p.S266R|1|0.14|ENSG00000275004|chr22:22488601-22488601|A/C|missense_variant	18.324413293986947	0.6112419832031293	3				NaN	NaN	0	NaN	1785	3131	4916
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4919	18.669	NaN	2840.4	30	0	1003.9	0.106	+			8703	EEAYNKLNQC	10	51	606.2735912914687	1210.5326296497374	2	606.774658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EEAYNKLNQC_	ENSG00000213973|ENST00000596209|ZNF99	31.634271133179894	0.6214930414500597	3				NaN	NaN	0	NaN	1786	3131	4916
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4920	18.67	NaN	1089	30	0	107.04	0.106	+			19985	KEIDKEEHL	9	43	570.7985060497894	1139.5824591663786	2	570.7984008789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEIDKEEHL_	ENSG00000154545|ENST00000471932|MAGED4;ENSG00000179222|ENST00000326587|MAGED1;ENSG00000187243|ENST00000335504|MAGED4B;ENST00000470594.5_1_X:51805328-51809606:-|nuORF;ENST00000479281.5_1_X:51931784-51932886:+|nuORF;ENST00000485420.5_1_X:51636757-51640983:+|nuORF;ENST00000494718.5_1_X:51640434-51640983:+|nuORF;MAGED1|p.P628Rfs*18|1|0.09|ENSG00000179222|chrX:51900215-51900215|C/-|frameshift_variant;nc|ENSG00000179222|Q9Y5V3-2|MAGED1;nc|ENSG00000187243|Q96JG8-2|MAGED4;nc|ENSG00000187243|Q96JG8-4|MAGED4	49.536043120802724	0.308405419312776	3				NaN	NaN	0	NaN	1787	3131	4916
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4921	18.672	NaN	2494	30	0	479.2	0.106	+			27293	MGPPASHTCHR	11	46	398.51470415158616	1192.5222830549585	3	398.5144348144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MGPPASHTCHR_	nc|ENSG00000161692|Q8NFT6-2|DBF4B	24.231819034082204	0.7356191775841856	3				NaN	NaN	0	NaN	1788	3131	4916
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4922	18.674	NaN	1644.1	30	0	290.29	0.106	+			1529	AGASRWAR	8	47	437.73542338729425	873.4562938413885	2	437.7349853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AGASRWAR_	ENST00000380794.5_1_2:25384284-25384404:-|nuORF	40.5726180659479	0.6527593143185008	3				NaN	NaN	0	NaN	1789	3131	4916
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4923	18.676	NaN	2385.5	30	0	320.37	0.036			+	9898	EQLTPTVPSP	10	67	534.7829568124234	1067.5513606916468	2	535.7861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EQLTPTVPSP_	REV__MUC16|p.S6238P|1|0.34|ENSG00000181143|chr19:8958058-8958058|A/G|missense_variant	24.519189625965996	0.6795976720565101	3				NaN	NaN	0	NaN	1790	3131	4916
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4929	18.69	NaN	6531	30	0	953.18	0.214	+			43360	TGDPNSKAL	9	60	451.7328529268094	901.4511529204188	2	451.73236083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TGDPNSKAL_	ENSG00000172828|ENST00000303334|CES3;nc|ENSG00000172828|Q6UWW8-2|CES3	82.7504851949679	0.08565546331141553	3				NaN	NaN	0	NaN	1793	3134	4928
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4930	18.694	NaN	5298.6	30	0	1012.5	0.106	+			47686	VSEAAADVGL	10	61	466.2403412457677	930.4661295583354	2	466.23992919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSEAAADVGL_	ENSG00000127586|ENST00000262315|CHTF18;ENST00000471202.5_1_16:838684-840117:+|nuORF;ENST00000479976.5_1_16:838624-840569:+|nuORF;nc|ENSG00000127586|Q8WVB6-2|CHTF18	56.72105179125745	0.3956618550748046	3				NaN	NaN	0	NaN	1794	3134	4928
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4931	18.696	NaN	2267.4	30	0	479.95	0.106	+			28141	NAKGQGLVR	9	53	471.77760851215356	NaN	0	471.77734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NAKGQGLVR_	ENSG00000197245|ENST00000374268|FAM110D	21.9598887501803	0.3626577482100488	3				NaN	NaN	0	NaN	1795	3134	4928
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4932	18.698	NaN	1855.1	30	0	157.94	0.106	+			7138	DAAYSHHY	8	54	482.201845609255	962.38913828531	2	482.2010498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DAAYSHHY_	ENSG00000059378|ENST00000263549|PARP12	68.484700416344	0.4195245774506064	3				NaN	NaN	0	NaN	1796	3134	4928
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4933	18.699	NaN	1259.9	30	0	165.47	0.106			+	18423	ISARASVST	9	47	446.2488767194094	890.4832005056188	2	446.248291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ISARASVST_	REV__ENSG00000135144|ENST00000548759|DTX1	31.529811441608018	0.5085848003137583	3				NaN	NaN	0	NaN	1797	3134	4928
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4934	18.701	NaN	1076.5	30	0	89.386	0.106	+			272	AANVAPKF	8	50	409.23055739055263	816.4465618479053	2	409.2302551269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AANVAPKF_	CDHR2|p.G788Vfs*4|1|0.31|ENSG00000074276|chr5:176584639-176584639|G/-|frameshift_variant;CDHR2|p.R383Afs*51|1|0.42|ENSG00000074276|chr5:176576133-176576133|C/-|frameshift_variant;CDHR2|p.S141Cfs*13|1|0.21|ENSG00000074276|chr5:176574097-176574098|-/TGTAGAG|frameshift_variant;CDHR2|p.S155Cfs*10|1|0.1|ENSG00000074276|chr5:176574138-176574139|-/AT|frameshift_variant;ENSG00000074276|ENST00000261944|CDHR2	33.51558372728122	0.7005509609380386	3				NaN	NaN	0	NaN	1798	3134	4928
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4935	18.703	NaN	1982.6	30	0	269.98	0.036	+			20139	KEKPEEESL	9	63	544.777536243319	1087.540519553438	2	544.7785034179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KEKPEEESL_	ENSG00000148396|ENST00000684901|SEC16A;nc|ENSG00000148396|O15027-2|SEC16A;nc|ENSG00000148396|O15027-3|SEC16A;nc|ENSG00000148396|O15027-4|SEC16A;nc|ENSG00000148396|O15027-5|SEC16A;SEC16A|p.P2155Hfs*25|1|0.25|ENSG00000148396|chr9:136447664-136447664|G/-|frameshift_variant	82.7504851949679	0.08565546331141553	3				NaN	NaN	0	NaN	1799	3134	4928
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4940	18.717	NaN	15126	30	0	2109.4	0.215	+			51313	YSHSSSSL	8	64	434.19596055984664	866.3773681864933	2	434.1957092285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YSHSSSSL_	ENSG00000139641|ENST00000394048|ESYT1;ENST00000548142.1_1_12:56532791-56536718:+|nuORF;nc|ENSG00000139641|Q9BSJ8-2|ESYT1	110.33723246496265	0.24497573416425186	3				NaN	NaN	0	NaN	1801	3137	4939
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4941	18.721	NaN	2353	30	0	368.29	0.106			+	9592	ELKSVARSLE	10	52	566.3230497125686	NaN	0	566.3231201171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ELKSVARSLE_	REV__ENSG00000160299|ENST00000359568|PCNT;REV__nc|ENSG00000160299|O95613-2|PCNT	41.42661286455405	0.3598046802465243	3				NaN	NaN	0	NaN	1802	3137	4939
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4942	18.723	NaN	1923.8	30	0	236.36	0.106	+			43843	TLTIRCCCC	9	52	508.2142036728324	1014.4138544124648	2	508.21343994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TLTIRCCCC_	ENSG00000183067|ENST00000380588|IGSF5;IGSF5|p.R292H|1|0.31|ENSG00000183067|chr21:39779246-39779246|G/A|missense_variant	27.882242232435846	0.5426732730940306	3				NaN	NaN	0	NaN	1803	3137	4939
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4943	18.724	NaN	1288	30	0	186.86	0.106			+	-1	LFLNMKGMM	9	52	558.7646557972755	1115.514758661351	2	558.7653198242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Oxidation (M)	_LFLNMKGM(Oxidation (M))M(Oxidation (M))_	REV__ENST00000264331.8_2_3:25648710-25648749:-|nuORF	31.954861631926434	0.5046124803899898	3				NaN	NaN	0	NaN	1804	3137	4939
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4944	18.726	NaN	1129.3	30	0	319.87	0.106	+			5781	AVGSAVVNK	9	47	422.74821061009675	NaN	0	422.7483825683594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVGSAVVNK_	ENSG00000151135|ENST00000280756|TMEM263	56.72105179125745	0.16330365735109603	3				NaN	NaN	0	NaN	1805	3137	4939
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4945	18.728	NaN	1446.2	30	0	227.66	0.106			+	50439	YADETLPIN	9	50	518.2546251896067	NaN	0	518.2548217773438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YADETLPIN_	REV__ENST00000581682.1_1_17:11787806-11828539:+|nuORF	35.61828744233558	0.29773779453147337	3				NaN	NaN	0	NaN	1806	3137	4939
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4946	18.73	NaN	1384.7	30	0	103.53	0.037	+			37458	SLISINNKLQ	10	36	377.22350630997596	1128.648689530128	3	377.5540771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SLISINNKLQ_	ENSG00000198793|ENST00000361445|MTOR	21.68575002086885	0.7027366847906487	3				NaN	NaN	0	NaN	1807	3137	4939
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4951	18.744	NaN	7743.1	30	0	1458.3	0.214	+			13250	GINGDIRAK	9	63	472.26979357221177	942.5250342112236	2	472.2692565917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GINGDIRAK_	ENSG00000101076|ENST00000316673|HNF4A;ENST00000372920.1_1_20:43030124-43058302:+|nuORF;nc|ENSG00000101076|P41235-2|HNF4A;nc|ENSG00000101076|P41235-3|HNF4A;nc|ENSG00000101076|P41235-4|HNF4A;nc|ENSG00000101076|P41235-6|HNF4A;nc|ENSG00000101076|P41235-7|HNF4A;nc|ENSG00000101076|P41235|HNF4A	104.01359247289065	0.03510646158778409	3				NaN	NaN	0	NaN	1809	3140	4950
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4952	18.747	NaN	3360.3	30	0	767.71	0.106	+			27457	MLMDDADVA	9	61	490.7074464965372	979.4003400598745	2	490.7071228027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MLMDDADVA_	DNAH9|p.G3533Dfs*40|1|0.29|ENSG00000007174|chr17:11880190-11880190|A/-|frameshift_variant;DNAH9|p.I3688Tfs*40|1|0.11|ENSG00000007174|chr17:11886915-11886924|ATCATGAACG/-|frameshift_variant;ENSG00000007174|ENST00000262442|DNAH9;nc|ENSG00000007174|Q9NYC9-2|DNAH9	53.351449002276354	0.2690372970092375	3				NaN	NaN	0	NaN	1810	3140	4950
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4953	18.749	NaN	5662.3	30	0	769.55	0.106	+			34554	RVLEAIQKK	9	59	362.2329731344836	1083.6770900036508	3	362.23284912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RVLEAIQKK_	ENSG00000169375|ENST00000394947|SIN3A;SIN3A|p.G659Afs*26|1|0.14|ENSG00000169375|chr15:75396375-75396375|C/-|frameshift_variant	101.45984612302182	0.0377122763612125	3				NaN	NaN	0	NaN	1811	3140	4950
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4954	18.751	NaN	4389.3	30	0	2934.7	0.106			+	8802	EEKLMERLK	9	40	392.5541816789204	1174.6407156369612	3	392.552978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EEKLMERLK_	REV__BDP1|p.L313*|1|0.33|ENSG00000145734|chr5:71470406-71470406|T/-|frameshift_variant;REV__BDP1|p.L313Ffs*9|1|0.2|ENSG00000145734|chr5:71470405-71470406|-/T|frameshift_variant;REV__BDP1|p.N597Ifs*16|1|0.21|ENSG00000145734|chr5:71495394-71495394|A/-|frameshift_variant;REV__BDP1|p.T1314Qfs*10|1|0.15|ENSG00000145734|chr5:71511028-71511028|A/-|frameshift_variant;REV__ENSG00000145734|ENST00000358731|BDP1;REV__ENST00000508917.6_1_5:70751704-70841064:+|nuORF;REV__nc|ENSG00000145734|A6H8Y1-2|BDP1;REV__nc|ENSG00000145734|A6H8Y1-3|BDP1;REV__nc|ENSG00000145734|A6H8Y1-4|BDP1;REV__nc|ENSG00000145734|A6H8Y1-6|BDP1;REV__nc|ENSG00000145734|A6H8Y1-7|BDP1	56.72105179125745	0.24094814563026265	3				NaN	NaN	0	NaN	1812	3140	4950
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4955	18.753	NaN	1545.5	30	0	163	0.106			+	37027	SIQRSPAKE	9	57	508.28117603448464	1014.5477991357693	2	508.2799072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SIQRSPAKE_	REV__ENSG00000066855|ENST00000262146|MTFR1;REV__ENST00000424808.6_1_8:66582187-66620357:+|nuORF;REV__nc|ENSG00000066855|Q15390-2|MTFR1	42.86426827375447	0.38666266728046506	3				NaN	NaN	0	NaN	1813	3140	4950
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4956	18.755	NaN	768.58	30	0	95.543	0.106			+	50027	WDPLARRG	8	42	485.76592481361536	NaN	0	485.76666259765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_WDPLARRG_	REV__ENST00000376062.6_1_20:30253395-30253500:-|nuORF	35.200714571348534	1.7418937515398478	3				NaN	NaN	0	NaN	1814	3140	4950
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4957	18.757	NaN	2624.8	30	0	312.52	0.037	+			39998	STMSACASTAR	11	65	571.7502385337241	1141.485924134248	2	571.7501831054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_STMSAC(Carbamidomethyl (C))ASTAR_	ENST00000566749.5_1_16:30094754-30094823:+|nuORF	82.83050618871818	0.12877585057862004	3				NaN	NaN	0	NaN	1815	3140	4950
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4967	18.778	NaN	10286	30	0	1142.2	0.214	+			20173	KEKVSTQNL	9	80	523.7959511681648	1045.5773494031296	2	523.7958374023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEKVSTQNL_	ENSG00000100342|ENST00000397278|APOL1;nc|ENSG00000100342|O14791-2|APOL1;nc|ENSG00000100342|O14791-3|APOL1	131.61620852596164	0.014413238321579053	3				NaN	NaN	0	NaN	1822	3143	4966
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4968	18.782	NaN	1475.8	30	0	262.01	0.106			+	9896	EQLSLEIAK	9	56	515.7925114602203	1029.5704699872406	2	515.7923583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EQLSLEIAK_	REV__ENSG00000115145|ENST00000263904|STAM2;REV__ENST00000463854.5_1_2:152988626-153032156:-|nuORF;REV__ENST00000482997.5_1_2:152982712-153032156:-|nuORF;REV__nc|ENSG00000115145|O75886-2|STAM2;REV__STAM2|p.Q453Kfs*10|1|0.07|ENSG00000115145|chr2:152120795-152120795|G/-|frameshift_variant	69.6276240434122	0.14239879520340665	3				NaN	NaN	0	NaN	1823	3143	4966
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4969	18.784	NaN	2421.4	30	0	440.12	0.106	+			39987	STMPHTSGMNR	11	55	609.771370531872	1217.5281881305439	2	609.7706909179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STMPHTSGMNR_	ENSG00000150907|ENST00000379561|FOXO1	76.16968421966216	0.18430501143391895	3				NaN	NaN	0	NaN	1824	3143	4966
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4970	18.786	NaN	1577.1	30	0	119.55	0.106			+	15721	GVRGSAVGA	9	46	387.2171329342277	772.4197129352555	2	387.2167053222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GVRGSAVGA_	REV__ENST00000373019.4_1_1:38455660-38455924:-|nuORF	37.15910966729921	0.4535818937225704	3				NaN	NaN	0	NaN	1825	3143	4966
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4971	18.787	NaN	2616.7	30	0	192.95	0.106	+			4750	ATMQGDREQLK	11	71	638.8198053295205	1275.6250577258409	2	638.8195190429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATMQGDREQLK_	ADNP|p.Y1033Mfs*48|1|0.33|ENSG00000101126|chr20:50891618-50891618|G/-|frameshift_variant;ENSG00000101126|ENST00000621696|ADNP	103.4299802665834	0.05359611455313024	3				NaN	NaN	0	NaN	1826	3143	4966
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4972	18.789	NaN	895.47	30	0	84.757	0.037	+			23084	KVVDRWNEK	9	48	587.3240234059808	1172.6334938787616	2	587.3251342773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KVVDRWNEK_	ENSG00000111639|ENST00000229238|MRPL51	51.19269402634007	0.2889735674168909	3				NaN	NaN	0	NaN	1827	3143	4966
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4973	18.79	NaN	1681.3	30	0	238.26	0.146			+	-1	GFQAVVFAVEP	11	38	402.54405307315295	NaN	0	402.21044921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))GFQAVVFAVEP_	REV__ENST00000265174.4_1_4:108622329-108622422:-|nuORF	25.125986553469783	0.45344013546260314	3				NaN	NaN	0	NaN	1828	3143	4966
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4980	18.808	NaN	3916.5	30	0	1107.9	0.214				-1	 	0	52	417.24054324939993	832.4665335655999	2	417.239990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1832	3146	4979
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4981	18.811	NaN	1425.2	30	0	245.02	0.106	+			9711	EMKSAMRKL	9	50	555.2959425227419	NaN	0	555.2957763671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_EM(Oxidation (M))KSAMRKL_	ENSG00000181958|ENST00000641526|OR4A15;nc|ENSG00000181958|Q8NGL6|OR4A15;OR4A15|p.V334*|1|0.34|ENSG00000181958|chr11:55368877-55368877|A/-|frameshift_variant	49.44154591367651	0.21054156626303966	3				NaN	NaN	0	NaN	1833	3146	4979
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4982	18.813	NaN	1518	30	0	305.47	0.106	+			20404	KETGGVEKL	9	47	480.7722215626324	959.5298901920648	2	480.77178955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KETGGVEKL_	ENSG00000164754|ENST00000297338|RAD21	47.95952297671804	0.32689736945648856	3				NaN	NaN	0	NaN	1834	3146	4979
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4983	18.815	NaN	1996.2	30	0	288.76	0.106	+			25492	LPSENHKEM	9	51	542.758241849467	1083.501930765734	2	542.758544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LPSENHKEM_	ENSG00000025772|ENST00000372813|TOMM34	81.52500206392136	0.09095445986635249	3				NaN	NaN	0	NaN	1835	3146	4979
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4984	18.817	NaN	1534.3	30	0	123.28	0.106				-1	SECKSRDVL	9	58	547.2690739302899	1092.5235949273797	2	547.26904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_SEC(Carbamidomethyl (C))KSRDVL_	ENSG00000100991|ENST00000252015|TRPC4AP;nc|ENSG00000100991|Q8TEL6-3|TRPC4AP	39.252832667884924	0.4290233611298554	3				NaN	NaN	0	NaN	1836	3146	4979
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4985	18.819	NaN	3185	30	0	1166.4	0.106	+			39678	STIGPEGVHQK	11	41	384.8724578979089	1151.5955442939267	3	384.8721008300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STIGPEGVHQK_	nc|ENSG00000157654|Q9Y2D5-8|PALM2AKAP2;nc|ENSG00000157654|Q9Y2D5-9|PALM2AKAP2	35.17822180527639	0.6208003396870814	3				NaN	NaN	0	NaN	1837	3146	4979
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4986	18.821	NaN	1324	30	0	241.04	0.037			+	11170	FGPWINESPT	10	47	574.2744636045398	1146.5343742758796	2	574.2747192382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FGPWINESPT_	REV__ENSG00000185324|ENST00000353379|CDK10;REV__ENST00000472018.5_1_16:89760470-89762097:+|nuORF;REV__ENST00000505733.5_1_16:89758861-89762180:+|nuORF;REV__nc|ENSG00000185324|Q15131-2|CDK10;REV__nc|ENSG00000185324|Q15131-3|CDK10;REV__nc|ENSG00000185324|Q15131-4|CDK10;REV__nc|ENSG00000185324|Q15131-7|CDK10	38.753607047826485	0.5606299674732264	3				NaN	NaN	0	NaN	1838	3146	4979
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4995	18.841	NaN	2663	30	0	645.42	0.214	+			3603	ASVPAQAPK	9	55	434.74820111928557	867.4818493053712	2	434.7476501464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASVPAQAPK_	ENSG00000162244|ENST00000294189|RPL29;ENST00000480306.5_1_3:52027767-52028806:-|nuORF	66.42927471994793	0.16001998865088202	3				NaN	NaN	0	NaN	1844	3149	4994
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4996	18.844	NaN	2432.6	30	0	289.03	0.106	+			6715	CADNTGAKNL	10	54	532.2458354110074	NaN	0	532.2459106445312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_C(Carbamidomethyl (C))ADNTGAKNL_	ENSG00000125691|ENST00000479035|RPL23;ENST00000584912.5_1_17:37008851-37009963:-|nuORF	58.2462437865262	0.2485996375737153	3				NaN	NaN	0	NaN	1845	3149	4994
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4997	18.846	NaN	2374.6	30	0	153.83	0.106				-1	NCHFRDLFESF	11	69	736.3247801033582	1470.6350072735163	2	736.3246459960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_NC(Carbamidomethyl (C))HFRDLFESF_	ENST00000368977.8_1_6:108616162-108645125:+|nuORF	37.81151784470057	0.5878881669006212	3				NaN	NaN	0	NaN	1846	3149	4994
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4998	18.848	NaN	3060.4	30	0	1306.5	0.106			+	-1	ESVRCGIKA	9	40	510.2677302378323	1018.5209075424647	2	510.2673645019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_ESVRC(Carbamidomethyl (C))GIKA_	REV__ENST00000468316.1_1_7:102045028-102045088:+|nuORF	35.61828744233558	0.47037581924408073	3				NaN	NaN	0	NaN	1847	3149	4994
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4999	18.85	NaN	796.17	30	0	190.89	0.106	+			43396	TGGVAQNFQ	9	43	461.22471257117485	920.4348722091497	2	461.2247009277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TGGVAQNFQ_	CAPN11|p.S248N|1|0.07|ENSG00000137225|chr6:44173298-44173298|G/A|missense_variant	35.61828744233558	0.47037581924408073	3				NaN	NaN	0	NaN	1848	3149	4994
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5000	18.851	NaN	1489.1	30	0	606.19	0.035			+	49990	WALVMFIP	8	42	488.7684631347656	NaN	0	488.7684631347656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_WALVMFIP_	REV__ENSG00000198691|ENST00000370225|ABCA4	24.504012794735996	1.7418937515398478	3				NaN	NaN	0	NaN	1849	3149	4994
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5013	18.879	NaN	17492	30	0	6520.4	0.214	+			2983	ASFDKAKLK	9	69	504.29846411061	1006.58237528802	2	504.2978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASFDKAKLK_	ENSG00000034510|ENST00000233143|TMSB10	129.42129120953632	0.01549634589885217	3				NaN	NaN	0	NaN	1859	3152	5012
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5014	18.882	NaN	12373	30	0	3009.2	0.106			+	3189	ASKKIEGKF	9	46	336.53452244120996	1006.5817379238299	3	336.5342712402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASKKIEGKF_	REV__tr|U7SUA5|U7SUA5_FUSNUOligopeptidaseFOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01160PE=3SV=1	23.04248740728303	0.5879033540491928	3				NaN	NaN	0	NaN	1860	3152	5012
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5015	18.884	NaN	2258.2	30	0	266.29	0.106	+			38646	SSIEKTISK	9	55	496.7847754597007	NaN	0	496.7847595214844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSIEKTISK_	nc|ENSG00000211892|P01861-1|IGHG4;nc|ENSG00000211892|P01861|IGHG4	140.11223852658463	0.0007151002093754883	3				NaN	NaN	0	NaN	1861	3152	5012
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5016	18.886	NaN	1271.1	30	0	237.32	0.106			+	47833	VSKYLPLV	8	47	459.7849107983057	917.5552686634114	2	459.7843322753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSKYLPLV_	REV__ENSG00000056998|ENST00000398806|GYG2;REV__ENST00000381161.5_1_X:2748138-2799251:+|nuORF;REV__nc|ENSG00000056998|O15488-3|GYG2;REV__nc|ENSG00000056998|O15488-4|GYG2;REV__nc|ENSG00000056998|O15488-5|GYG2;REV__nc|ENSG00000056998|O15488-6|GYG2;REV__nc|ENSG00000056998|O15488|GYG2	29.841539824830324	0.7289191502596711	3				NaN	NaN	0	NaN	1862	3152	5012
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5017	18.888	NaN	1889.6	30	0	320.65	0.106				-1	 	0	48	366.7346704796304	731.4547880260608	2	366.7341003417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1863	3152	5012
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5018	18.889	NaN	1234.1	30	0	238.77	0.035			+	10149	ESSNAMKYN	9	48	522.2269783923794	1042.4394038515586	2	522.2271118164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ESSNAMKYN_	REV__ENSG00000169064|ENST00000675490|ZBBX;REV__nc|ENSG00000169064|A8MT70-3|ZBBX;REV__nc|ENSG00000169064|A8MT70|ZBBX	63.30626980617807	0.18605348971131092	3				NaN	NaN	0	NaN	1864	3152	5012
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5019	18.89	NaN	21687	30	0	7807.6	0.144			+	49469	VVYHHIRAG	9	59	351.1979815387666	1050.5721152165	3	351.19775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VVYHHIRAG_	REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-10|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-13|TTN;REV__nc|ENSG00000155657|Q8WZ42-2|TTN;REV__nc|ENSG00000155657|Q8WZ42-3|TTN;REV__nc|ENSG00000155657|Q8WZ42-4|TTN;REV__nc|ENSG00000155657|Q8WZ42-5|TTN;REV__nc|ENSG00000155657|Q8WZ42-7|TTN;REV__nc|ENSG00000155657|Q8WZ42-8|TTN;REV__nc|ENSG00000155657|Q8WZ42-9|TTN;REV__nc|ENSG00000155657|Q8WZ42|TTN;REV__TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;REV__TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;REV__TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;REV__TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;REV__TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant	34.172542307311794	0.4838870758800184	3				NaN	NaN	0	NaN	1865	3152	5012
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5032	18.919	NaN	7348	30	0	775.57	0.214			+	37371	SLFQLTKSQ	9	63	526.2920463114793	1050.5695396897586	2	526.2929077148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLFQLTKSQ_	REV__ENST00000538137.6_1_18:22930939-22932115:-|nuORF	47.227680397652996	0.3354815899219835	3				NaN	NaN	0	NaN	1875	3155	5031
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5033	18.923	NaN	5058.3	30	0	996.85	0.106				-1	PYPRFRPMASC	11	68	699.3252854020582	1396.6360178709162	2	699.3248291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_PYPRFRPM(Oxidation (M))ASC(Carbamidomethyl (C))_	ENSG00000103335|ENST00000301015|PIEZO1;PIEZO1|p.A2395Pfs*117|1|0.37|ENSG00000103335|chr16:88716061-88716067|CCCCGCA/-|frameshift_variant;PIEZO1|p.F1977Lfs*33|1|0.38|ENSG00000103335|chr16:88720403-88720403|A/-|frameshift_variant	24.519189625965996	0.7326048944360514	3				NaN	NaN	0	NaN	1876	3155	5031
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5034	18.925	NaN	5892.3	30	0	1416.8	0.106	+			38846	SSNLPVNNK	9	56	486.7596700675114	971.5047872018229	2	486.7590637207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSNLPVNNK_	ENSG00000135974|ENST00000258457|C2orf49	82.7504851949679	0.08565546331141553	3				NaN	NaN	0	NaN	1877	3155	5031
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5035	18.926	NaN	2998.5	30	0	581.48	0.106			+	1420	AEWPRGRR	8	36	343.1895943780538	1026.5469537343615	3	343.18927001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEWPRGRR_	REV__ENSG00000162458|ENST00000375766|FBLIM1;REV__FBLIM1|p.N331Kfs*6|1|0.42|ENSG00000162458|chr1:15777267-15777268|-/A|frameshift_variant;REV__FBLIM1|p.P142Rfs*59|1|0.38|ENSG00000162458|chr1:15767546-15767546|C/-|frameshift_variant;REV__nc|ENSG00000162458|Q8WUP2-2|FBLIM1;REV__nc|ENSG00000162458|Q8WUP2-3|FBLIM1	31.954861631926434	0.7126016770032289	3				NaN	NaN	0	NaN	1878	3155	5031
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5036	18.928	NaN	3237	30	0	562.7	0.106			+	31444	QKQSPSLTNA	10	67	537.2829767920969	1072.5514006509936	2	537.27880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QKQSPSLTNA_	REV__LILRA1|p.N448Kfs*34|1|0.3|ENSG00000104974|chr19:54600538-54600539|-/A|frameshift_variant	58.2462437865262	0.38179041844353556	3				NaN	NaN	0	NaN	1879	3155	5031
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5037	18.93	NaN	2067.4	30	0	300.79	0.106	+			12456	GEDGSGKTTL	10	54	482.73106756933277	NaN	0	482.7327575683594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GEDGSGKTTL_	ENSG00000135720|ENST00000258198|DYNC1LI2;nc|ENSG00000135720|O43237-2|DYNC1LI2	56.632244143249146	0.2617798060632103	3				NaN	NaN	0	NaN	1880	3155	5031
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5038	18.932	NaN	2077.7	30	0	816.31	0.034				-1	 	0	52	478.2647774393529	954.5150019455058	2	478.2640075683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1881	3155	5031
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5045	18.948	NaN	14959	30	0	3275	0.214				-1	 	0	65	438.25123534860177	874.4879177640036	2	438.2508544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1885	3158	5044
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5046	18.952	NaN	3066.8	30	0	455.43	0.106			+	49037	VVHSAIPESI	10	62	526.2920463114793	1050.5695396897586	2	526.290771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVHSAIPESI_	REV__ENST00000561277.5_1_15:77338902-77338950:-|nuORF	40.05817265558897	0.5486090488315611	3				NaN	NaN	0	NaN	1886	3158	5044
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5047	18.954	NaN	1325.5	30	0	208.74	0.106			+	6749	CDLILYCKE	9	50	550.263180517027	1098.5118081008538	2	550.2633666992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_CDLILYCKE_	REV__ENSG00000147606|ENST00000276609|SLC26A7;REV__nc|ENSG00000147606|Q8TE54-2|SLC26A7	37.81151784470057	0.4459294069877048	3				NaN	NaN	0	NaN	1887	3158	5044
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5048	18.955	NaN	1574.5	30	0	218.16	0.106	+			34473	RVAPEEHPV	9	50	517.2752464686353	NaN	0	517.2752075195312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RVAPEEHPV_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;POTEF|p.L804P|1|0.35|ENSG00000196604|chr2:130075061-130075061|A/G|missense_variant	34.172542307311794	0.30503706118289736	3				NaN	NaN	0	NaN	1888	3158	5044
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5049	18.957	NaN	837.55	30	0	88.793	0.106	+			5735	AVFSKSVQK	9	43	497.28890678512545	992.5632606370509	2	497.28936767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVFSKSVQK_	ENSG00000012048|ENST00000357654|BRCA1;nc|ENSG00000012048|P38398-4|BRCA1;nc|ENSG00000012048|P38398-7|BRCA1;nc|ENSG00000012048|P38398-8|BRCA1	53.351449002276354	0.2690372970092375	3				NaN	NaN	0	NaN	1889	3158	5044
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5050	18.959	NaN	2828.6	30	0	344.58	0.106	+			11861	FTDEEEVQID	10	51	612.7663547765243	1223.5181566198485	2	612.766357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FTDEEEVQID_	ENST00000395811.9_1_17:17091142-17091328:+|nuORF	54.722347961057174	0.4138398245444204	3				NaN	NaN	0	NaN	1890	3158	5044
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5051	18.961	NaN	1238.2	30	0	280.86	0.033	+			28622	NKVDNPEA	8	46	443.7173254250514	885.4200979169028	2	444.2177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NKVDNPEA_	ENSG00000174197|ENST00000703841|MGA;MGA|p.D2578Rfs*45|1|0.32|ENSG00000174197|chr15:41762342-41762343|-/A|frameshift_variant;MGA|p.E1249Rfs*25|2|0.28|ENSG00000174197|chr15:41729243-41729244|-/A|frameshift_variant;MGA|p.E1249Rfs*42|1|0.17|ENSG00000174197|chr15:41729244-41729244|A/-|frameshift_variant;MGA|p.L1297Wfs*39|1|0.3|ENSG00000174197|chr15:41734566-41734566|C/-|frameshift_variant;MGA|p.R614Efs*7|1|0.35|ENSG00000174197|chr15:41696846-41696846|A/-|frameshift_variant;MGA|p.S2228Kfs*5|1|0.33|ENSG00000174197|chr15:41750284-41750285|-/A|frameshift_variant;MGA|p.T1916Qfs*7|1|0.4|ENSG00000174197|chr15:41749350-41749350|A/-|frameshift_variant;nc|ENSG00000174197|Q8IWI9-3|MGA;nc|ENSG00000174197|Q8IWI9|MGA	34.172542307311794	0.6954784234644539	3				NaN	NaN	0	NaN	1891	3158	5044
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5057	18.975	NaN	5936.4	30	0	978.03	0.214				-1	 	0	65	400.73538533975955	799.4562177463191	2	400.73480224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1894	3161	5056
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5058	18.979	NaN	4200.4	30	0	705.5	0.106			+	20503	KFEQLTYT	8	67	515.2642638552529	1028.5139747773057	2	515.2644653320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KFEQLTYT_	REV__DNAH6|p.L3633*|2|0.38|ENSG00000115423|chr2:84784749-84784749|T/-|frameshift_variant;REV__DNAH6|p.R2682Kfs*27|1|0.42|ENSG00000115423|chr2:84701316-84701317|-/A|frameshift_variant;REV__DNAH6|p.S3773Lfs*5|1|0.09|ENSG00000115423|chr2:84796377-84796377|T/-|frameshift_variant;REV__ENSG00000115423|ENST00000389394|DNAH6;REV__nc|ENSG00000115423|Q9C0G6-4|DNAH6	73.97473282117947	0.3737790450121076	3				NaN	NaN	0	NaN	1895	3161	5056
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5059	18.981	NaN	1883.6	30	0	323.31	0.106	+			6823	CHRLSCSVSV	10	55	545.7602759565333	1089.5059989798665	2	545.7610473632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_CHRLSCSVSV_	ENST00000472067.1_1_7:142991698-142998016:+|nuORF	52.936696900407355	0.4300801048568001	3				NaN	NaN	0	NaN	1896	3161	5056
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5060	18.982	NaN	1114.6	30	0	120.49	0.106	+			41627	SVQRPGLAR	9	50	492.29094274198286	NaN	0	492.2908020019531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVQRPGLAR_	ENSG00000102901|ENST00000562787|CENPT;ENST00000562513.6_1_16:67862078-67865741:-|nuORF;ENST00000562947.5_1_16:67864542-67866179:-|nuORF;ENST00000565157.5_1_16:67864257-67867798:-|nuORF;ENST00000569862.5_1_16:67865068-67866179:-|nuORF;nc|ENSG00000102901|Q96BT3-2|CENPT	39.252832667884924	0.27938773122138094	3				NaN	NaN	0	NaN	1897	3161	5056
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5061	18.984	NaN	1425.4	30	0	270.88	0.106				-1	 	0	54	475.7333457980395	949.4521386628791	2	475.7325439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1898	3161	5056
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5062	18.986	NaN	1461	30	0	285.46	0.106			+	12363	GDQHLDKV	8	41	456.2324253706034	910.4502978080068	2	456.2325134277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GDQHLDKV_	REV__ENST00000470960.1_1_12:107262187-107268295:+|nuORF;REV__nc|ENSG00000111785|Q9NVN3-1|RIC8B;REV__nc|ENSG00000111785|Q9NVN3-3|RIC8B	35.61828744233558	0.6843154725607303	3				NaN	NaN	0	NaN	1899	3161	5056
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5063	18.988	NaN	1643.4	30	0	501.92	0.035	+			39869	STLPKPVQK	9	31	333.2060295978822	NaN	0	333.2061767578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STLPKPVQK_	ENSG00000040341|ENST00000524300|STAU2;ENST00000521293.5_1_8:74529642-74659041:-|nuORF;ENST00000522962.5_1_8:74566130-74621380:-|nuORF;ENST00000524113.5_1_8:74585313-74650536:-|nuORF;nc|ENSG00000040341|Q9NUL3-2|STAU2;nc|ENSG00000040341|Q9NUL3-3|STAU2;nc|ENSG00000040341|Q9NUL3-5|STAU2;nc|ENSG00000040341|Q9NUL3-8|STAU2;STAU2|p.C491Lfs*31|1|0.39|ENSG00000040341|chr8:73552072-73552073|-/G|frameshift_variant;STAU2|p.F158Lfs*16|1|0.27|ENSG00000040341|chr8:73617388-73617388|A/-|frameshift_variant;STAU2|p.K274Nfs*22|1|0.09|ENSG00000040341|chr8:73613813-73613813|T/-|frameshift_variant;STAU2|p.K410Ifs*9|1|0.07|ENSG00000040341|chr8:73552313-73552314|-/A|frameshift_variant;STAU2|p.L259Tfs*15|2|0.48|ENSG00000040341|chr8:73613860-73613861|-/T|frameshift_variant	52.936696900407355	0.1864545979552969	3				NaN	NaN	0	NaN	1900	3161	5056
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5071	19.006	NaN	34267	30	0	14522	0.214				-1	 	0	87	343.5347014142136	1027.582274842841	3	343.53448486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1905	3164	5070
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5072	19.01	NaN	4715.7	30	0	1144.6	0.106	+			20108	KEKKLTSDL	9	61	531.3143170488761	NaN	0	531.3143310546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEKKLTSDL_	ENSG00000125844|ENST00000377813|RRBP1;nc|ENSG00000125844|Q9P2E9-3|RRBP1	82.7504851949679	0.061958946529908215	3				NaN	NaN	0	NaN	1906	3164	5070
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5073	19.011	NaN	7133.6	30	0	2465.8	0.106			+	19890	KEETVSKKL	9	53	354.54496910610607	1060.6130779185182	3	354.5447998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEETVSKKL_	REV__ENSG00000162782|ENST00000444136|TDRD5;REV__nc|ENSG00000162782|Q8NAT2|TDRD5;REV__TDRD5|p.K412Nfs*17|1|0.14|ENSG00000162782|chr1:179634560-179634560|A/-|frameshift_variant	54.776311868738084	0.25715957988447635	3				NaN	NaN	0	NaN	1907	3164	5070
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5074	19.013	NaN	2348.2	30	0	332.54	0.106	+			16524	HEVKEAQTL	9	66	527.7805482724771	1053.546543611754	2	527.7808227539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HEVKEAQTL_	ENSG00000127603|ENST00000564288|MACF1;MACF1|p.A5223Lfs*8|1|0.21|ENSG00000127603|chr1:39388486-39388486|G/-|frameshift_variant;MACF1|p.N4824Kfs*19|1|0.33|ENSG00000127603|chr1:39387292-39387293|-/A|frameshift_variant;MACF1|p.T4896Lfs*29|1|0.27|ENSG00000127603|chr1:39387507-39387507|A/-|frameshift_variant;nc|ENSG00000127603|Q9UPN3-2|MACF1;nc|ENSG00000127603|Q9UPN3-3|MACF1;nc|ENSG00000127603|Q9UPN3-4|MACF1;nc|ENSG00000127603|Q9UPN3-5|MACF1;nc|ENSG00000127603|Q9UPN3|MACF1	54.776311868738084	0.25715957988447635	3				NaN	NaN	0	NaN	1908	3164	5070
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5075	19.015	NaN	2393.8	30	0	444.11	0.106	+			36344	SESSPPKAM	9	53	467.2211486022906	932.4277442713812	2	467.2209167480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SESSPPKAM_	ENSG00000050405|ENST00000341247|LIMA1;LIMA1|p.T536Lfs*38|2|0.4|ENSG00000050405|chr12:50177739-50177739|G/-|frameshift_variant;nc|ENSG00000050405|Q9UHB6-2|LIMA1;nc|ENSG00000050405|Q9UHB6-3|LIMA1;nc|ENSG00000050405|Q9UHB6-4|LIMA1;nc|ENSG00000050405|Q9UHB6-5|LIMA1	64.20726635412375	0.17854274437659667	3				NaN	NaN	0	NaN	1909	3164	5070
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5076	19.017	NaN	2474.4	30	0	220.35	0.106	+			3266	ASLMNDDFEK	10	67	593.2573758337026	1184.500198734205	2	593.2573852539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_ASLM(Oxidation (M))NDDFEK_	ENSG00000100266|ENST00000263246|PACSIN2;nc|ENSG00000100266|Q9UNF0-2|PACSIN2	56.43379154798735	0.3982744522255666	3				NaN	NaN	0	NaN	1910	3164	5070
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5077	19.019	NaN	3961.1	30	0	438.22	0.037	+			5077	ATSLSRVSRM	10	59	369.8686936519415	1106.5842515560246	3	369.8680725097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATSLSRVSRM_	ENST00000439587.6_1_9:35835156-35841170:+|nuORF	47.95952297671804	0.47580206326914537	3				NaN	NaN	0	NaN	1911	3164	5070
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5085	19.038	NaN	8227.1	30	0	1260	0.214	+			19299	KAGEVFIHK	9	66	514.7985590956325	1027.582565258065	2	514.798583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAGEVFIHK_	ENSG00000147140|ENST00000276079|NONO;ENST00000486613.6_1_X:70504267-70513876:+|nuORF;ENST00000566277.2_1_16:69791529-69791679:-|nuORF;nc|ENSG00000147140|Q15233-2|NONO	99.01295224348159	0.040209060045561164	3				NaN	NaN	0	NaN	1916	3167	5084
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5086	19.042	NaN	2696.3	30	0	532.47	0.106	+			18820	ITVTCRASSF	10	53	542.7764612612359	1083.5383695892717	2	542.7767944335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ITVTCRASSF_	ENSG00000204516|ENST00000252229|MICB;ENSG00000204520|ENST00000449934|MICA;nc|ENSG00000204516|Q29980-2|MICB	30.317721548370564	0.6322445173429027	3				NaN	NaN	0	NaN	1917	3167	5084
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5087	19.044	NaN	4277.6	30	0	589.02	0.106	+			46928	VIYEKTIRK	9	68	575.3537184755124	1148.6928840178248	2	575.3533935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VIYEKTIRK_	ENSG00000124429|ENST00000262753|POF1B;nc|ENSG00000124429|Q8WVV4-1|POF1B;nc|ENSG00000124429|Q8WVV4-3|POF1B	63.53385203322761	0.18415635464017938	3				NaN	NaN	0	NaN	1918	3167	5084
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5088	19.046	NaN	2661.2	30	0	759.68	0.106	+			38348	SRLPHSAHP	9	53	501.26716295700516	1000.5197729808103	2	501.26715087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SRLPHSAHP_	ENSG00000148498|ENST00000374788|PARD3;nc|ENSG00000148498|Q8TEW0-10|PARD3;nc|ENSG00000148498|Q8TEW0-11|PARD3;nc|ENSG00000148498|Q8TEW0-3|PARD3;nc|ENSG00000148498|Q8TEW0-4|PARD3;nc|ENSG00000148498|Q8TEW0-5|PARD3;nc|ENSG00000148498|Q8TEW0-6|PARD3;nc|ENSG00000148498|Q8TEW0-7|PARD3;nc|ENSG00000148498|Q8TEW0-8|PARD3;nc|ENSG00000148498|Q8TEW0-9|PARD3;nc|ENSG00000148498|Q8TEW0|PARD3;PARD3|p.I456*|1|0.04|ENSG00000148498|chr10:34382573-34382573|T/-|frameshift_variant;PARD3|p.S1335Lfs*15|1|0.17|ENSG00000148498|chr10:34111237-34111238|-/G|frameshift_variant	42.396135135203025	0.392153681582562	3				NaN	NaN	0	NaN	1919	3167	5084
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5089	19.047	NaN	17758	30	0	6192.3	0.106				-1	 	0	50	383.9050128950576	1148.6932092853729	3	383.904541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1920	3167	5084
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5090	19.049	NaN	1845.5	30	0	376.35	0.106	+			22629	KTVIEPLKK	9	53	528.345228593492	1054.675904253784	2	528.345947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KTVIEPLKK_	ENSG00000147439|ENST00000276416|BIN3;nc|ENSG00000147439|Q9NQY0-2|BIN3	58.62960593111931	0.22503835759089574	3				NaN	NaN	0	NaN	1921	3167	5084
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5091	19.051	NaN	1432.2	30	0	160.54	0.033	+			40983	SVGLHTGEV	9	51	449.73554789529356	897.4565428573871	2	449.73516845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVGLHTGEV_	ENSG00000081853|ENST00000394576|PCDHGA2;ENSG00000204956|ENST00000517417|PCDHGA1;ENSG00000253159|ENST00000252085|PCDHGA12;ENSG00000253731|ENST00000517434|PCDHGA6;ENSG00000253767|ENST00000398604|PCDHGA8;ENSG00000254245|ENST00000253812|PCDHGA3;ENSG00000261934|ENST00000573521|PCDHGA9;nc|ENSG00000081853|Q9Y5H1-2|PCDHGA2;nc|ENSG00000204956|Q9Y5H4-2|PCDHGA1;nc|ENSG00000253159|O60330-2|PCDHGA12;nc|ENSG00000253731|Q9Y5G7-2|PCDHGA6;nc|ENSG00000253767|Q9Y5G5-2|PCDHGA8;nc|ENSG00000254245|Q9Y5H0-2|PCDHGA3;nc|ENSG00000261934|Q9Y5G4-2|PCDHGA9;PCDHGA1|p.Q772Sfs*79|1|0.05|ENSG00000204956|chr5:141332994-141332994|C/-|frameshift_variant;PCDHGA1|p.R627H|1|0.52|ENSG00000204956|chr5:141332564-141332564|G/A|missense_variant;PCDHGA2|p.K788Rfs*64|1|0.06|ENSG00000081853|chr5:141341330-141341330|A/-|frameshift_variant;PCDHGA3|p.R627C|1|0.35|ENSG00000254245|chr5:141345912-141345912|C/T|missense_variant;PCDHGA6|p.F770Sfs*23|1|0.29|ENSG00000253731|chr5:141376389-141376389|T/-|frameshift_variant;PCDHGA8|p.L712Sfs*33|1|0.15|ENSG00000253767|chr5:141394944-141394945|-/T|frameshift_variant;PCDHGA8|p.N788Kfs*2|1|0.27|ENSG00000253767|chr5:141395171-141395172|-/A|frameshift_variant	35.61828744233558	0.47037581924408073	3				NaN	NaN	0	NaN	1922	3167	5084
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5099	19.069	NaN	3320.6	30	0	955.72	0.214	+			40448	STVPPSLRK	9	51	492.79601107215325	983.5774692111065	2	492.7952880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STVPPSLRK_	ENSG00000213676|ENST00000375203|ATF6B;nc|ENSG00000213676|Q99941-2|ATF6B	54.776311868738084	0.25715957988447635	3				NaN	NaN	0	NaN	1927	3170	5098
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5100	19.073	NaN	2735.6	30	0	685.74	0.106	+			33119	RENTQTTI	8	50	481.7490793394777	961.4836057457554	2	481.7481384277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RENTQTTI_	ENSG00000165119|ENST00000376263|HNRNPK;ENST00000485383.1_1_3:96068520-96068997:+|nuORF;nc|ENSG00000165119|P61978-3|HNRNPK;nc|ENSG00000165119|P61978|HNRNPK	60.97194046774394	0.49215940876911696	3				NaN	NaN	0	NaN	1928	3170	5098
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5101	19.075	NaN	6148.8	30	0	662.63	0.106			+	38193	SQFEPESLDET	11	65	641.277366327072	1280.5401797209438	2	641.2760620117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SQFEPESLDET_	REV__ENSG00000198198|ENST00000634258|SZT2;REV__nc|ENSG00000198198|Q5T011-5|SZT2;REV__SZT2|p.L1644Ffs*4|1|0.36|ENSG00000198198|chr1:43431727-43431728|-/T|frameshift_variant;REV__SZT2|p.P2844Rfs*9|1|0.34|ENSG00000198198|chr1:43443669-43443669|C/-|frameshift_variant;REV__SZT2|p.R3241Afs*11|1|0.33|ENSG00000198198|chr1:43448401-43448401|G/-|frameshift_variant	53.08895987439943	0.38514566451266113	3				NaN	NaN	0	NaN	1929	3170	5098
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5102	19.077	NaN	1988.7	30	0	312.64	0.106			+	3104	ASGKAAENKL	10	61	494.775619972421	987.536687011642	2	494.7742004394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASGKAAENKL_	REV__ENST00000597330.1_1_19:58556424-58557021:+|nuORF	59.93077597824379	0.36646980200755325	3				NaN	NaN	0	NaN	1930	3170	5098
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5103	19.078	NaN	2384.1	30	0	210.79	0.106	+			39371	STDGAKVFSK	10	63	520.2760920496902	1038.5376311661803	2	520.2752075195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STDGAKVFSK_	ENSG00000100883|ENST00000216774|SRP54;nc|ENSG00000100883|P61011-2|SRP54	142.36107225718385	0.01012457621782354	3				NaN	NaN	0	NaN	1931	3170	5098
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5104	19.08	NaN	1866.4	30	0	447.63	0.106	+			9213	EGSDPAHIA	9	44	448.7096445715542	895.4047362099084	2	448.7091979980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EGSDPAHIA_	BANK1|p.T601Lfs*8|2|0.19|ENSG00000153064|chr4:102030160-102030160|A/-|frameshift_variant;ENSG00000153064|ENST00000322953|BANK1;nc|ENSG00000153064|Q8NDB2-2|BANK1;nc|ENSG00000153064|Q8NDB2-3|BANK1;nc|ENSG00000153064|Q8NDB2-4|BANK1	25.450171626174864	0.5654022654467333	3				NaN	NaN	0	NaN	1932	3170	5098
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5105	19.082	NaN	2299.8	30	0	668.61	0.037			+	18606	ISRVDRPRP	9	41	365.88454477280936	1094.6318049186282	3	365.8847351074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ISRVDRPRP_	REV__ENSG00000266094|ENST00000579436|RASSF5;REV__nc|ENSG00000266094|Q8WWW0-3|RASSF5;REV__RASSF5|p.L342Sfs*18|1|0.32|ENSG00000266094|chr1:206585211-206585211|C/-|frameshift_variant	29.170058357718403	0.5306379469863586	3				NaN	NaN	0	NaN	1933	3170	5098
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5112	19.098	NaN	19037	30	0	7861.5	0.214				-1	 	0	66	465.23340150532044	928.4522500774409	2	465.23297119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1937	3173	5111
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5113	19.102	NaN	5665.3	30	0	2141.1	0.106	+			44461	TSPLVRKSP	9	45	328.86628486595237	983.5770251980571	3	328.8661193847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TSPLVRKSP_	ENST00000430335.1_3_22:38699202-38712683:-|nuORF	31.954861631926434	0.5046124803899898	3				NaN	NaN	0	NaN	1938	3173	5111
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5114	19.104	NaN	1648.6	30	0	257.31	0.106	+			23217	KYGKDKAK	8	55	469.27775612068797	936.540959308176	2	469.27691650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KYGKDKAK_	tr|U7SSR3|U7SSR3_FUSNUIroncomplexoutermembranerecepterproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01351PE=3SV=1	35.61828744233558	0.6843154725607303	3				NaN	NaN	0	NaN	1939	3173	5111
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5115	19.106	NaN	1518.7	30	0	438.34	0.106	+			8865	EERKRREEKRR	11	45	524.6339350972776	1570.8799758920327	3	524.6343994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EERKRREEKRR_	ENSG00000146830|ENST00000678049|GIGYF1	6.320883175729509	0.8408918793690873	3				NaN	NaN	0	NaN	1940	3173	5111
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5116	19.108	NaN	3539	30	0	1231.8	0.106				-1	MCQLHLKSSE	10	45	616.7912103269293	1231.5678677206586	2	616.7908935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_MC(Carbamidomethyl (C))QLHLKSSE_	TCF12|p.V634dup|1|0.17|ENSG00000140262|chr15:57273255-57273256|-/GTC|inframe_insertion	30.317721548370564	0.6322445173429027	3				NaN	NaN	0	NaN	1941	3173	5111
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5117	19.109	NaN	1301	30	0	257.23	0.106	+			21320	KLTIGNALH	9	34	322.8627982050129	965.5665652152387	3	322.86273193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KLTIGNALH_	MDM2|p.L305Ffs*16|1|0.09|ENSG00000135679|chr12:68836745-68836746|-/CAATCAGA|frameshift_variant	29.170058357718403	0.5306379469863586	3				NaN	NaN	0	NaN	1942	3173	5111
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5118	19.111	NaN	2002.6	30	0	520.82	0.035	+			12107	GADYRWSF	8	57	501.2275427720467	1000.4405326108935	2	501.22698974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GADYRWSF_	ENSG00000163781|ENST00000260810|TOPBP1;TOPBP1|p.K1266Nfs*10|1|0.13|ENSG00000163781|chr3:133616887-133616887|T/-|frameshift_variant;TOPBP1|p.R1378Sfs*18|1|0.04|ENSG00000163781|chr3:133611043-133611044|-/AAAAGAGAATGTG|frameshift_variant;TOPBP1|p.R964Efs*12|1|0.19|ENSG00000163781|chr3:133624090-133624090|T/-|frameshift_variant	35.61828744233558	0.6843154725607303	3				NaN	NaN	0	NaN	1943	3173	5111
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5128	19.133	NaN	3178.2	30	0	407.9	0.214	+			16448	HESRQITQV	9	68	549.2891872582688	1096.5638215833376	2	549.2891845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HESRQITQV_	ENSG00000104695|ENST00000221138|PPP2CB;ENSG00000113575|ENST00000481195|PPP2CA;ENSG00000119414|ENST00000373547|PPP6C;ENSG00000149923|ENST00000279387|PPP4C;ENST00000566749.5_1_16:30094185-30096380:+|nuORF;ENST00000567040.5_1_16:30087698-30094972:+|nuORF;nc|ENSG00000113575|P67775-2|PPP2CA;nc|ENSG00000119414|O00743-2|PPP6C;nc|ENSG00000119414|O00743-3|PPP6C	90.60085204095205	0.06317133949006545	3				NaN	NaN	0	NaN	1950	3176	5127
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5129	19.136	NaN	8397.1	30	0	2647.5	0.106				-1	RLTKCVELG	9	39	359.2018673114484	1074.5837725345452	3	359.20147705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_RLTKC(Carbamidomethyl (C))VELG_	ENSG00000149823|ENST00000279281|VPS51;nc|ENSG00000149823|Q9UID3-2|VPS51	24.519189625965996	0.574102787014149	3				NaN	NaN	0	NaN	1951	3176	5127
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5130	19.138	NaN	2581.8	30	0	454.59	0.106	+			4706	ATLTTTSATSK	11	57	541.2907247402006	1080.5668965472012	2	541.2909545898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATLTTTSATSK_	ENSG00000010244|ENST00000394670|ZNF207;ENST00000584696.1_1_17:30693734-30695045:+|nuORF;nc|ENSG00000010244|O43670-2|ZNF207;nc|ENSG00000010244|O43670-3|ZNF207;nc|ENSG00000010244|O43670|ZNF207	102.0615471778698	0.05642515548841253	3				NaN	NaN	0	NaN	1952	3176	5127
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5131	19.14	NaN	1354.5	30	0	255.62	0.106	+			13695	GPQGRAFVH	9	44	484.75734379803424	967.5001346628685	2	484.7568054199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GPQGRAFVH_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	47.91560031466742	0.327412564698279	3				NaN	NaN	0	NaN	1953	3176	5127
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5132	19.142	NaN	1970.1	30	0	432.6	0.106	+			35414	SAQTGARAL	9	51	437.7409149916145	NaN	0	437.74072265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SAQTGARAL_	DDX54|p.G271Afs*41|1|0.25|ENSG00000123064|chr12:113175098-113175098|C/-|frameshift_variant;DDX54|p.G702Efs*14|1|0.58|ENSG00000123064|chr12:113163022-113163022|C/-|frameshift_variant;DDX54|p.R734Lfs*97|1|0.27|ENSG00000123064|chr12:113161992-113161992|C/-|frameshift_variant;ENSG00000123064|ENST00000306014|DDX54;nc|ENSG00000123064|Q8TDD1-2|DDX54	56.43379154798735	0.16452882468284893	3				NaN	NaN	0	NaN	1954	3176	5127
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5133	19.144	NaN	2871.7	30	0	936.42	0.033	+			28671	NLSHSQSL	8	45	443.2255500667678	884.4365472003357	2	443.22467041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NLSHSQSL_	ENST00000276055.3_1_X:46457237-46457324:+|nuORF	64.20726635412375	0.4601301477144759	3				NaN	NaN	0	NaN	1955	3176	5127
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5134	19.144	NaN	2050.1	30	0	370.24	0.14				-1	MATSGRLSF	9	51	514.247987762404	1026.481422591608	2	514.2483520507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))M(Oxidation (M))ATSGRLSF_	ENSG00000136327|ENST00000258829|NKX2-8	25.450171626174864	0.5654022654467333	3				NaN	NaN	0	NaN	1956	3176	5127
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5145	19.17	NaN	3469.9	30	0	780.45	0.214	+			42837	TEEERRAEL	9	65	566.7841834639053	1131.5538139946104	2	566.784423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEEERRAEL_	ENSG00000140259|ENST00000267812|MFAP1;ENST00000484386.1_1_15:44097294-44102132:-|nuORF	47.95952297671804	0.32689736945648856	3				NaN	NaN	0	NaN	1964	3179	5144
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5146	19.173	NaN	1704.9	30	0	221.61	0.106	+			9683	ELVTMMGDQG	10	58	556.734362013536	1111.454171093872	2	556.7352294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Oxidation (M)	_ELVTM(Oxidation (M))M(Oxidation (M))GDQG_	ENSG00000196712|ENST00000358273|NF1;ENST00000493220.5_2_17:29556858-29657521:+|nuORF;ENST00000495910.6_1_17:29490228-29576996:+|nuORF;nc|ENSG00000196712|P21359-2|NF1;nc|ENSG00000196712|P21359-4|NF1;nc|ENSG00000196712|P21359-6|NF1;NF1|p.F2429Qfs*7|1|0.17|ENSG00000196712|chr17:31349214-31349215|-/CAAGTAAGAATTAATT|frameshift_variant;NF1|p.K1386Rfs*20|1|0.33|ENSG00000196712|chr17:31252978-31252978|A/-|frameshift_variant	66.42927471994793	0.3073667423445326	3				NaN	NaN	0	NaN	1965	3179	5144
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5147	19.175	NaN	1269.1	30	0	445.8	0.106				-1	 	0	36	340.18559042352945	678.3566279138589	2	340.18548583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1966	3179	5144
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5148	19.177	NaN	922.54	30	0	145.49	0.106	+			22686	KVADSKTLL	9	43	487.79815673828125	NaN	0	487.79815673828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KVADSKTLL_	ENSG00000104889|ENST00000221486|RNASEH2A;ENST00000590121.1_1_19:12917502-12918326:+|nuORF;ENST00000590279.1_1_19:12917826-12918144:+|nuORF	19.1035232394073	0.3723251548669699	3				NaN	NaN	0	NaN	1967	3179	5144
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5149	19.179	NaN	2596.4	30	0	346.45	0.106			+	8511	EATKQGRNI	9	64	508.77838690217305	NaN	0	508.7784423828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EATKQGRNI_	REV__ENSG00000205038|ENST00000378402|PKHD1L1;REV__PKHD1L1|p.F723Lfs*26|1|0.15|ENSG00000205038|chr8:109412344-109412344|T/-|frameshift_variant;REV__PKHD1L1|p.G2188Efs*28|1|0.79|ENSG00000205038|chr8:109452767-109452767|G/-|frameshift_variant;REV__PKHD1L1|p.N718Tfs*31|1|0.35|ENSG00000205038|chr8:109412328-109412328|A/-|frameshift_variant;REV__PKHD1L1|p.N744Ffs*5|1|0.09|ENSG00000205038|chr8:109412406-109412407|-/ACTTTAACTTTAG|frameshift_variant	42.396135135203025	0.2590952873412954	3				NaN	NaN	0	NaN	1968	3179	5144
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5150	19.18	NaN	1426.3	30	0	178.32	0.036			+	-1	GAGDGARSCPE	11	51	538.7244028199755	1075.4342527067508	2	538.7247314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_GAGDGARSC(Carbamidomethyl (C))PE_	REV__ENSG00000133454|ENST00000335473|MYO18B;REV__MYO18B|p.I1502Ffs*3|1|0.09|ENSG00000133454|chr22:25891370-25891370|A/-|frameshift_variant;REV__MYO18B|p.K1556Sfs*19|1|0.16|ENSG00000133454|chr22:25895276-25895276|A/-|frameshift_variant;REV__nc|ENSG00000133454|Q8IUG5-3|MYO18B	28.081489160057373	0.6952392775027776	3				NaN	NaN	0	NaN	1969	3179	5144
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5151	19.181	NaN	4221.4	30	0	491.01	0.141	+			13553	GLSRGGQRNQ	10	64	536.7858031752176	NaN	0	536.7861938476562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GLSRGGQRNQ_	ENST00000361479.9_1_13:20221406-20222581:+|nuORF	45.97224482568171	0.33106653400957564	3				NaN	NaN	0	NaN	1970	3179	5144
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5155	19.197	NaN	9072.7	30	0	5726.9	0.214	+			1671	AGRYPALLW	9	35	349.53097595490823	1045.5710984649247	3	349.5306396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AGRYPALLW_	ENST00000263370.2_1_19:41246057-41246498:+|nuORF	20.94693142431847	0.6074874384046576	3				NaN	NaN	0	NaN	1971	3182	5154
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5156	19.2	NaN	3219.8	30	0	1254.4	0.106	+			27393	MKNLDISH	8	60	479.2453252401908	956.4760975471817	2	479.24481201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MKNLDISH_	STT3A|p.R437H|1|0.32|ENSG00000134910|chr11:125612692-125612692|G/A|missense_variant	47.91560031466742	0.6071945918984287	3				NaN	NaN	0	NaN	1972	3182	5154
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5157	19.202	NaN	2637.2	30	0	213.32	0.106			+	12093	GAASSRRR	8	57	430.74213960670255	NaN	0	430.741943359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GAASSRRR_	REV__ENST00000436072.6_1_7:37955747-37956332:-|nuORF	76.84663266511073	1.7418937515398478	3				NaN	NaN	0	NaN	1973	3182	5154
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5158	19.204	NaN	2527.4	30	0	1380.5	0.106			+	21343	KLWQYTGQ	8	47	512.2655776159938	1022.5166022987877	2	512.2650756835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KLWQYTGQ_	REV__ENST00000372492.8_2_1:43649473-43650825:+|nuORF	30.503639358989545	0.7238069182250283	3				NaN	NaN	0	NaN	1974	3182	5154
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5159	19.206	NaN	1720.6	30	0	478.7	0.106				-1	WFIAVCFAF	9	48	580.7813194686884	1159.5480860041766	2	580.7813720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_WFIAVC(Carbamidomethyl (C))FAF_	ENSG00000109158|ENST00000264318|GABRA4;ENSG00000145863|ENST00000274545|GABRA6	21.70233525837049	0.6004277881119521	3				NaN	NaN	0	NaN	1975	3182	5154
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5160	19.208	NaN	2035.8	30	0	282.82	0.106	+			35809	SEAPPTNQA	9	53	457.71460160603084	913.4146502788617	2	457.71441650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SEAPPTNQA_	ENSG00000179222|ENST00000326587|MAGED1;ENST00000485420.5_1_X:51636757-51640983:+|nuORF;ENST00000494718.5_1_X:51637400-51640272:+|nuORF;MAGED1|p.P628Rfs*18|1|0.09|ENSG00000179222|chrX:51900215-51900215|C/-|frameshift_variant;nc|ENSG00000179222|Q9Y5V3-2|MAGED1	58.2462437865262	0.22823408064396822	3				NaN	NaN	0	NaN	1976	3182	5154
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5161	19.209	NaN	1242.3	30	0	160.5	0.036			+	-1	SFDERLHI	8	46	529.7679898008876	1057.521426668575	2	529.7675170898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SFDERLHI_	REV__ENSG00000196378|ENST00000429371|ZNF34;REV__ENST00000527740.1_1_8:145998653-146003561:-|nuORF;REV__nc|ENSG00000196378|Q8IZ26|ZNF34	42.47446043378293	0.6409579893742323	3				NaN	NaN	0	NaN	1977	3182	5154
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5167	19.225	NaN	6947	30	0	1512.4	0.214	+			2984	ASFDKAKLK	9	66	504.29846411061	1006.58237528802	2	504.29791259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASFDKAKLK_	ENSG00000034510|ENST00000233143|TMSB10	72.87924865735499	0.12833875048249987	3				NaN	NaN	0	NaN	1980	3185	5166
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5168	19.229	NaN	4724.3	30	0	3168.6	0.106	+			42515	TAPQAEHAM	9	45	478.21912000716384	954.4236870811277	2	478.21881103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAPQAEHAM_	CLUH|p.D1252Tfs*5|1|0.42|ENSG00000132361|chr17:2690771-2690771|T/-|frameshift_variant;CLUH|p.K974Rfs*21|1|0.3|ENSG00000132361|chr17:2694178-2694178|G/-|frameshift_variant;CLUH|p.P878Rfs*12|1|0.23|ENSG00000132361|chr17:2694959-2694959|G/-|frameshift_variant;ENSG00000132361|ENST00000651024|CLUH;nc|ENSG00000132361|O75153|CLUH	56.43379154798735	0.2433427591689151	3				NaN	NaN	0	NaN	1981	3185	5166
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5169	19.231	NaN	5484.4	30	0	1446.3	0.106	+			43339	TGATLYLLR	9	43	336.53452244120996	1006.5817379238299	3	336.5344543457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TGATLYLLR_	ENSG00000189043|ENST00000339600|NDUFA4;ENST00000486007.1_1_7:10977674-10979684:-|nuORF;NDUFA4|p.A37T|1|0.4|ENSG00000189043|chr7:10938830-10938830|C/T|missense_variant	24.20275056022122	0.577060078256802	3				NaN	NaN	0	NaN	1982	3185	5166
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5170	19.233	NaN	4855.9	30	0	1213.9	0.106	+			9685	ELWLEQNIK	9	47	391.54768583859715	1171.6212281159915	3	391.5471496582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ELWLEQNIK_	ENST00000311237.4_19:20578692-20592633:-|nuORF	60.11826168202944	0.21262886028301267	3				NaN	NaN	0	NaN	1983	3185	5166
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5171	19.235	NaN	1169.7	30	0	99.665	0.106			+	31476	QLACLQGALP	10	50	507.2759716581352	NaN	0	507.27569580078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QLACLQGALP_	REV__ENST00000330374.6_1_X:150574182-150574368:+|nuORF	27.882242232435846	0.4086243523356342	3				NaN	NaN	0	NaN	1984	3185	5166
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5172	19.236	NaN	2192.6	30	0	747.37	0.106			+	9306	EIAESDQSY	9	48	521.2206612972034	1040.4267696612067	2	521.7227783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EIAESDQSY_	REV__ENSG00000101605|ENST00000356443|MYOM1;REV__MYOM1|p.P866Rfs*31|1|0.35|ENSG00000101605|chr18:3129429-3129429|G/-|frameshift_variant;REV__nc|ENSG00000101605|P52179-2|MYOM1	34.172542307311794	0.4838870758800184	3				NaN	NaN	0	NaN	1985	3185	5166
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5173	19.238	NaN	1512.4	30	0	152.62	0.037	+			9336	EIKTRRQQD	9	49	587.3186107015785	NaN	0	587.3192138671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EIKTRRQQD_	NGEF|p.E192K|1|0.39|ENSG00000066248|chr2:232920538-232920538|C/T|missense_variant	56.43379154798735	0.16452882468284893	3				NaN	NaN	0	NaN	1986	3185	5166
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5183	19.26	NaN	12276	30	0	1521.7	0.214	+			15497	GVANALAHK	9	63	440.7532793114942	NaN	0	440.7532653808594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVANALAHK_	ENSG00000223609|ENST00000650601|HBD;ENSG00000244734|ENST00000335295|HBB	143.10689835833298	0.0010355756725221861	3				NaN	NaN	0	NaN	1993	3188	5182
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5184	19.264	NaN	3312.9	30	0	327.81	0.106	+			35533	SAVKEGTAM	9	61	447.22357072856937	892.4325885239388	2	447.2230529785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAVKEGTAM_	BICC1|p.I566Nfs*44|1|0.3|ENSG00000122870|chr10:58799216-58799217|-/A|frameshift_variant;BICC1|p.I566Sfs*5|1|0.57|ENSG00000122870|chr10:58799217-58799217|A/-|frameshift_variant;BICC1|p.P501Hfs*18|1|0.03|ENSG00000122870|chr10:58798530-58798530|C/-|frameshift_variant;ENSG00000122870|ENST00000373886|BICC1;nc|ENSG00000122870|Q9H694-2|BICC1	47.95952297671804	0.32689736945648856	3				NaN	NaN	0	NaN	1994	3188	5182
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5185	19.265	NaN	1494.9	30	0	184.71	0.106	+			50486	YAKNGQDL	8	48	454.7277735660423	907.4409941988846	2	454.7269592285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YAKNGQDL_	ENSG00000153187|ENST00000640218|HNRNPU;nc|ENSG00000153187|Q00839-2|HNRNPU	56.72105179125745	0.5342425954139568	3				NaN	NaN	0	NaN	1995	3188	5182
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5186	19.267	NaN	1364.8	30	0	429.97	0.106			+	29397	PARPHVQG	8	55	431.2375793457031	NaN	0	431.2375793457031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PARPHVQG_	REV__ENSG00000232125|ENST00000452335|DYTN	42.47446043378293	1.7418937515398478	3				NaN	NaN	0	NaN	1996	3188	5182
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5187	19.269	NaN	995.81	30	0	153.86	0.106	+			30751	QDMNIKKN	8	45	495.7534095521861	NaN	0	495.7770690917969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QDMNIKKN_	ASPM|p.Q2620Nfs*22|1|0.15|ENSG00000066279|chr1:197101393-197101394|-/TT|frameshift_variant	45.9519527083369	1.7418937515398478	3				NaN	NaN	0	NaN	1997	3188	5182
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5188	19.271	NaN	1282.3	30	0	212.19	0.037				-1	MGACLGWWNS	10	47	591.2447624484963	1180.4749719637925	2	591.2446899414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_MGAC(Carbamidomethyl (C))LGWWNS_	ENST00000332496.10_1_15:90771900-90772140:+|nuORF	35.61828744233558	0.588957954432594	3				NaN	NaN	0	NaN	1998	3188	5182
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5198	19.293	NaN	10504	30	0	2633.5	0.214	+			5411	ATYHGSFSTK	10	68	549.764480423271	1097.514407913342	2	549.7644653320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATYHGSFSTK_	ENSG00000163359|ENST00000295550|COL6A3;ENST00000491769.1_1_2:238233419-238250825:-|nuORF;ENST00000493608.1_1_2:238242084-238243404:-|nuORF;nc|ENSG00000163359|P12111-2|COL6A3;nc|ENSG00000163359|P12111-4|COL6A3	120.63048641472336	0.026439265609364573	3				NaN	NaN	0	NaN	2005	3191	5197
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5199	19.296	NaN	9051	30	0	3325	0.106	+			34578	RVMKALVNR	9	85	543.8322247433993	1085.6498965535984	2	543.8321533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RVMKALVNR_	ENSG00000149136|ENST00000278412|SSRP1;ENST00000293880.9_1_11:57098199-57100416:-|nuORF	120.8684288430529	0.02067403653475984	3				NaN	NaN	0	NaN	2006	3191	5197
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5200	19.298	NaN	12375	30	0	2404.5	0.106	+			4139	ATEQPLTAK	9	66	479.76421002333086	957.5138671134617	2	479.76361083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATEQPLTAK_	ENSG00000120725|ENST00000394817|SIL1	114.85826248499774	0.024312442104607014	3				NaN	NaN	0	NaN	2007	3191	5197
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5201	19.3	NaN	10138	30	0	2287.6	0.106	+			22460	KTLNDSLKK	9	74	523.8138952625025	1045.6132375918048	2	523.8143920898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTLNDSLKK_	CCDC146|p.E671Qfs*21|1|0.06|ENSG00000135205|chr7:77282647-77282648|-/CAGAGGCAGA|frameshift_variant;CCDC146|p.F933Lfs*10|1|0.43|ENSG00000135205|chr7:77294794-77294794|T/-|frameshift_variant;ENSG00000135205|ENST00000285871|CCDC146;nc|ENSG00000135205|Q8IYE0-2|CCDC146	127.46168284122857	0.016682644177004526	3				NaN	NaN	0	NaN	2008	3191	5197
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5202	19.302	NaN	7016.3	30	0	1919.9	0.106	+			22330	KTFTVQTTK	9	64	527.3010104928042	1052.5874680524082	2	527.3008422851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KTFTVQTTK_	ENST00000395002.6_1_4:89744147-89744438:-|nuORF	136.98908636845044	0.011892605960677736	3				NaN	NaN	0	NaN	2009	3191	5197
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5203	19.304	NaN	4072.6	30	0	499.67	0.038	+			49136	VVMAADRSLKK	11	68	609.3555937044482	1216.6966344756963	2	609.3552856445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VVMAADRSLKK_	ENSG00000189241|ENST00000368608|TSPYL1	82.5048064154565	0.13149110632092975	3				NaN	NaN	0	NaN	2010	3191	5197
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5204	19.304	NaN	3748.4	30	0	453.85	0.141	+			45275	TVQVIRTQ	8	59	472.7803827505926	943.5462125679852	2	472.77947998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TVQVIRTQ_	ENSG00000205038|ENST00000378402|PKHD1L1;PKHD1L1|p.F723Lfs*26|1|0.15|ENSG00000205038|chr8:109412344-109412344|T/-|frameshift_variant;PKHD1L1|p.G2188Efs*28|1|0.79|ENSG00000205038|chr8:109452767-109452767|G/-|frameshift_variant;PKHD1L1|p.K631Nfs*9|1|0.08|ENSG00000205038|chr8:109408125-109408125|A/-|frameshift_variant;PKHD1L1|p.N718Tfs*31|1|0.35|ENSG00000205038|chr8:109412328-109412328|A/-|frameshift_variant;PKHD1L1|p.N744Ffs*5|1|0.09|ENSG00000205038|chr8:109412406-109412407|-/ACTTTAACTTTAG|frameshift_variant	71.87747018426188	0.391254423828572	3				NaN	NaN	0	NaN	2011	3191	5197
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5215	19.33	NaN	15827	30	0	2662.1	0.214	+			28427	NEVEQRHTL	9	75	563.2861514462907	1124.5577499593812	2	563.2861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NEVEQRHTL_	ENSG00000047410|ENST00000367478|TPR;TPR|p.E1141Dfs*29|1|0.08|ENSG00000047410|chr1:186344085-186344086|-/CAGGTAAA|frameshift_variant;TPR|p.E856D|1|0.2|ENSG00000047410|chr1:186351372-186351372|T/G|missense_variant;TPR|p.P2083Qfs*3|1|0.31|ENSG00000047410|chr1:186323735-186323735|G/-|frameshift_variant;TPR|p.T2133Lfs*63|1|0.03|ENSG00000047410|chr1:186322382-186322383|-/GTACTAATAAG|frameshift_variant;TPR|p.V1142Efs*26|1|0.08|ENSG00000047410|chr1:186344083-186344084|-/TT|frameshift_variant	138.06239232086	0.011389075116295402	3				NaN	NaN	0	NaN	2019	3194	5214
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5216	19.333	NaN	5716.5	30	0	855.19	0.106	+			22707	KVAPAPAVVK	10	68	490.31897133260986	978.6233897320197	2	490.3182678222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVAPAPAVVK_	ENSG00000148303|ENST00000323345|RPL7A;ENST00000424041.1_1_20:36073469-36073910:-|nuORF;ENST00000463740.5_1_9:136215098-136217195:+|nuORF	118.74307786436346	0.029104951601466193	3				NaN	NaN	0	NaN	2020	3194	5214
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5217	19.335	NaN	2658.7	30	0	333.25	0.106	+			43014	TEKQSAAAL	9	57	459.7481409758966	917.4817290185932	2	459.74786376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TEKQSAAAL_	ENSG00000078618|ENST00000352171|NRDC	56.43379154798735	0.2433427591689151	3				NaN	NaN	0	NaN	2021	3194	5214
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5218	19.337	NaN	7647.6	30	0	3776.1	0.106				-1	AVCQGARRRS	10	40	387.5405593395711	1159.5998486189133	3	387.54010009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_AVC(Carbamidomethyl (C))QGARRRS_	ENSG00000232030|ENST00000416929|MAGEB6B	20.83715455343099	0.7096666582730032	3				NaN	NaN	0	NaN	2022	3194	5214
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5219	19.339	NaN	5426.8	30	0	2205.8	0.106			+	24052	LEHLGFGKK	9	56	343.5338303073022	NaN	0	343.54150390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LEHLGFGKK_	REV__ENSG00000143341|ENST00000271588|HMCN1;REV__HMCN1|p.G3718Afs*6|1|0.04|ENSG00000143341|chr1:186113995-186113995|G/-|frameshift_variant;REV__HMCN1|p.L3491Hfs*10|1|0.12|ENSG00000143341|chr1:186095419-186095420|-/ATAT|frameshift_variant;REV__HMCN1|p.S4801Rfs*11|1|0.07|ENSG00000143341|chr1:186145536-186145537|-/AGAATAA|frameshift_variant;REV__HMCN1|p.T334Qfs*26|1|0.22|ENSG00000143341|chr1:185922472-185922472|A/-|frameshift_variant;REV__HMCN1|p.V1339Gfs*22|1|0.42|ENSG00000143341|chr1:186000186-186000186|T/-|frameshift_variant;REV__HMCN1|p.Y2955Ifs*3|1|0.29|ENSG00000143341|chr1:186082933-186082934|-/A|frameshift_variant;REV__nc|ENSG00000143341|Q96RW7-2|HMCN1	45.97224482568171	0.23445038899310136	3				NaN	NaN	0	NaN	2023	3194	5214
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5220	19.341	NaN	3848.6	30	0	619.18	0.036	+			16488	HETSKMKVL	9	61	536.7951153640144	1071.5756777948286	2	536.7949829101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HETSKMKVL_	ENSG00000067445|ENST00000173898|TRO;ENSG00000179222|ENST00000326587|MAGED1;ENST00000475183.1_1_X:54953428-54957230:+|nuORF;ENST00000492706.5_1_X:54953428-54957450:+|nuORF;ENST00000494718.5_1_X:51643260-51645023:+|nuORF;nc|ENSG00000067445|Q12816-2|TRO;nc|ENSG00000067445|Q12816-3|TRO;nc|ENSG00000067445|Q12816-4|TRO;nc|ENSG00000067445|Q12816-5|TRO;nc|ENSG00000179222|Q9Y5V3-2|MAGED1;TRO|p.S1034Rfs*10|1|0.07|ENSG00000067445|chrX:54929826-54929826|C/-|frameshift_variant	78.26377905018397	0.10505600812668463	3				NaN	NaN	0	NaN	2024	3194	5214
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5221	19.341	NaN	28487	30	0	5772.6	0.145			+	-1	RSRALFCCL	9	61	375.86009760851726	1124.5584634257518	3	375.8596496582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_RSRALFC(Carbamidomethyl (C))CL_	REV__ENST00000286614.10_1_8:89053580-89053622:-|nuORF	42.396135135203025	0.392153681582562	3				NaN	NaN	0	NaN	2025	3194	5214
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5230	19.363	NaN	11295	30	0	1528.3	0.214	+			28077	NAESGRGQVM	10	69	524.7456054876668	1047.4766580421335	2	524.7459106445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAESGRGQVM_	ENSG00000008517|ENST00000525643|IL32;nc|ENSG00000008517|P24001-3|IL32;nc|ENSG00000008517|P24001-4|IL32;nc|ENSG00000008517|P24001|IL32	120.30596017624542	0.026897611020491978	3				NaN	NaN	0	NaN	2031	3197	5229
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5231	19.366	NaN	3698.3	30	0	1122.8	0.106	+			5772	AVGPHLTAK	9	48	447.2640600540522	892.5135671749044	2	447.2636413574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVGPHLTAK_	ENSG00000185361|ENST00000327473|TNFAIP8L1	74.25504064058377	0.12238981753128622	3				NaN	NaN	0	NaN	2032	3197	5229
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5232	19.368	NaN	2331.4	30	0	150.24	0.106	+			36814	SIEKGGSLPK	10	60	508.29472216145905	1014.5748913897181	2	508.29278564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SIEKGGSLPK_	ENSG00000181163|ENST00000296930|NPM1;nc|ENSG00000181163|P06748-2|NPM1	59.93077597824379	0.36646980200755325	3				NaN	NaN	0	NaN	2033	3197	5229
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5233	19.37	NaN	1764.8	30	0	262.7	0.106	+			13531	GLRIKETK	8	57	472.7984339941886	943.5823150551772	2	472.79766845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GLRIKETK_	ENSG00000175792|ENST00000322623|RUVBL1;nc|ENSG00000175792|Q9Y265-2|RUVBL1	60.97194046774394	0.49215940876911696	3				NaN	NaN	0	NaN	2034	3197	5229
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5234	19.372	NaN	1061.1	30	0	129.37	0.106				-1	LGCLMLLE	8	52	495.7534095521861	NaN	0	495.2942199707031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))LGC(Carbamidomethyl (C))LMLLE_	ENST00000370651.5_1_6:64290081-64290159:+|nuORF	41.20836394106077	1.7418937515398478	3				NaN	NaN	0	NaN	2035	3197	5229
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5235	19.374	NaN	1598.4	30	0	495	0.106			+	-1	AVRMAPAPRL	10	32	366.54608154296875	NaN	0	366.54608154296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_AVRM(Oxidation (M))APAPRL_	REV__ENSG00000254656|ENST00000649591|RTL1;REV__RTL1|p.Q1207Rfs*77|4|0.14|ENSG00000254656|chr14:100881170-100881170|G/-|frameshift_variant	22.579656572578934	0.4201028297492154	3				NaN	NaN	0	NaN	2036	3197	5229
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5236	19.376	NaN	1830.9	30	0	341.7	0.036	+			40042	STNHTQALLK	10	56	556.8073556813874	1111.6001584295748	2	556.8071899414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STNHTQALLK_	ENSG00000205978|ENST00000382554|NYNRIN;NYNRIN|p.A1060Qfs*55|1|0.28|ENSG00000205978|chr14:24414924-24414924|G/-|frameshift_variant;NYNRIN|p.A1288Rfs*152|1|0.45|ENSG00000205978|chr14:24415606-24415606|C/-|frameshift_variant;NYNRIN|p.G1206Vfs*50|1|0.1|ENSG00000205978|chr14:24415362-24415362|G/-|frameshift_variant;NYNRIN|p.L483*|1|0.05|ENSG00000205978|chr14:24409238-24409238|C/-|frameshift_variant;NYNRIN|p.Q626Rfs*7|1|0.37|ENSG00000205978|chr14:24409667-24409667|C/-|frameshift_variant	58.2462437865262	0.38179041844353556	3				NaN	NaN	0	NaN	2037	3197	5229
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5245	19.396	NaN	8476.6	30	0	1996.7	0.214	+			48910	VVDNGSGMCK	10	60	505.22592419992503	1008.4372954666501	2	505.2254333496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVDNGSGMCK_	ACTBL2|p.R29Gfs*7|1|0.37|ENSG00000169067|chr5:57482623-57482623|G/-|frameshift_variant;ENSG00000075624|ENST00000646664|ACTB;ENSG00000169067|ENST00000423391|ACTBL2;ENST00000418351.1_1_15:44282253-44282364:-|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000477812.1_1_7:5569027-5569288:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF	66.96192283764107	0.30252237217063654	3				NaN	NaN	0	NaN	2043	3200	5244
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5246	19.399	NaN	4494.6	30	0	1042.6	0.106	+			855	AEGTAQQRL	9	54	487.2570408457133	972.4995287582266	2	487.2563781738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEGTAQQRL_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	124.08010499294276	0.018729767491916592	3				NaN	NaN	0	NaN	2044	3200	5244
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5247	19.401	NaN	2614.6	30	0	473.36	0.106	+			5449	ATYSVGMQK	9	58	500.74328914717415	999.4720253611483	2	500.74212646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_ATYSVGM(Oxidation (M))QK_	ENSG00000131941|ENST00000254260|RHPN2;ENST00000592247.1_1_19:33470904-33481620:-|nuORF;nc|ENSG00000131941|Q8IUC4-2|RHPN2;nc|ENSG00000258628|A8MT19|RHPN2P1	52.936696900407355	0.27249468807391813	3				NaN	NaN	0	NaN	2045	3200	5244
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5248	19.403	NaN	1010.9	30	0	85.22	0.106	+			31314	QILWYDEE	8	55	548.2536010742188	NaN	0	548.2536010742188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QILWYDEE_	BBOX1|p.E26del|1|0.03|ENSG00000129151|chr11:27055500-27055502|GAG/-|inframe_deletion;BBOX1|p.Q272Vfs*10|1|0.04|ENSG00000129151|chr11:27119822-27119823|-/GTTTTTGG|frameshift_variant;BBOX1|p.R168Mfs*37|1|0.11|ENSG00000129151|chr11:27093335-27093336|-/T|frameshift_variant;ENSG00000129151|ENST00000263182|BBOX1;ENST00000527505.1_1_11:27076962-27137060:+|nuORF	40.5726180659479	1.7418937515398478	3				NaN	NaN	0	NaN	2046	3200	5244
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5249	19.405	NaN	1438.6	30	0	201.27	0.106			+	23403	LAALRPDPA	9	51	462.26904992182125	922.5235469104425	2	462.26824951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LAALRPDPA_	REV__ENSG00000134326|ENST00000256722|CMPK2;REV__nc|ENSG00000134326|Q5EBM0-2|CMPK2;REV__nc|ENSG00000134326|Q5EBM0-3|CMPK2;REV__nc|ENSG00000134326|Q5EBM0-4|CMPK2	40.5726180659479	0.4135428067754104	3				NaN	NaN	0	NaN	2047	3200	5244
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5250	19.407	NaN	1559.8	30	0	293.69	0.106	+			8490	EASQKAAHGR	10	55	527.7748413085938	NaN	0	527.7748413085938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EASQKAAHGR_	ENST00000603864.5_1_12:51663522-51663705:-|nuORF	27.882242232435846	0.4086243523356342	3				NaN	NaN	0	NaN	2048	3200	5244
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5251	19.408	NaN	1135.6	30	0	724.15	0.033	+			297	AAPGEARAM	9	36	437.21607432444904	872.4175957156981	2	437.2157287597656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AAPGEARAM_	ENSG00000165238|ENST00000427277|WNK2;ENST00000467401.1_1_9:96070551-96082671:+|nuORF;nc|ENSG00000165238|Q9Y3S1-2|WNK2;nc|ENSG00000165238|Q9Y3S1-4|WNK2;nc|ENSG00000165238|Q9Y3S1|WNK2	34.172542307311794	0.4838870758800184	3				NaN	NaN	0	NaN	2049	3200	5244
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5259	19.426	NaN	4573.4	30	0	601.31	0.214	+			11451	FNDPNAKEM	9	67	541.2353351759766	1080.4561174187531	2	541.2346801757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_FNDPNAKEM(Oxidation (M))_	ENSG00000056097|ENST00000265069|ZFR	109.43880257439609	0.029570636687953285	3				NaN	NaN	0	NaN	2054	3203	5258
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5260	19.43	NaN	2570.8	30	0	1106.8	0.106	+			37745	SLTSRAAP	8	41	401.7250607269154	801.4355685206308	2	401.7242126464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLTSRAAP_	ENST00000519531.5_1_20:61904210-61914317:+|nuORF	51.33545320467046	0.5859736979383976	3				NaN	NaN	0	NaN	2055	3203	5258
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5261	19.432	NaN	894.55	30	0	363.09	0.106				-1	CPCCYCCSC	9	28	347.7535400390625	NaN	0	347.7535400390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_CPC(Carbamidomethyl (C))CYCCSC_	ENST00000346964.6_2_3:196770181-196770280:-|nuORF	2.718429308559148	0.4072763090772754	3				NaN	NaN	0	NaN	2056	3203	5258
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5262	19.434	NaN	1528.8	30	0	337.13	0.106			+	4864	ATPSKIAP	8	39	392.732322343976	783.4500917547521	2	392.7315979003906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATPSKIAP_	REV__ENSG00000169855|ENST00000464233|ROBO1;REV__nc|ENSG00000169855|Q9Y6N7-2|ROBO1;REV__nc|ENSG00000169855|Q9Y6N7-3|ROBO1;REV__nc|ENSG00000169855|Q9Y6N7-4|ROBO1;REV__nc|ENSG00000169855|Q9Y6N7-5|ROBO1;REV__nc|ENSG00000169855|Q9Y6N7-6|ROBO1;REV__ROBO1|p.R1504Sfs*40|1|0.01|ENSG00000169855|chr3:78606968-78606969|-/TGAC|frameshift_variant	31.954861631926434	0.7126016770032289	3				NaN	NaN	0	NaN	2057	3203	5258
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5263	19.435	NaN	1063.7	30	0	155.6	0.106	+			22242	KTAETGYIQR	10	45	583.8118856613871	1165.6092183895742	2	583.811279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KTAETGYIQR_	ENSG00000181222|ENST00000674977|POLR2A;nc|ENSG00000181222|P24928|POLR2A	42.242577148874844	0.5284808555555522	3				NaN	NaN	0	NaN	2058	3203	5258
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5264	19.437	NaN	724.81	30	0	223.33	0.106	+			21066	KKLIEDYEGK	10	22	611.8398773925999	1221.6652018519997	2	611.8390502929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KKLIEDYEGK_	ENSG00000111879|ENST00000338891|FAM184A;FAM184A|p.L424Ffs*10|1|0.45|ENSG00000111879|chr6:119020038-119020039|-/A|frameshift_variant;nc|ENSG00000111879|Q8NB25-2|FAM184A;nc|ENSG00000111879|Q8NB25-3|FAM184A;nc|ENSG00000111879|Q8NB25-4|FAM184A	19.262678746197807	0.7185678156885812	3				NaN	NaN	0	NaN	2059	3203	5258
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5265	19.439	NaN	1851.6	30	0	223.32	0.034	+			1336	AETLNNILA	9	58	479.76421002333086	957.5138671134617	2	479.7872314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AETLNNILA_	ENSG00000145949|ENST00000274643|MYLK4;MYLK4|p.E336Dfs*7|1|0.06|ENSG00000145949|chr6:2678252-2678252|C/-|frameshift_variant;nc|ENSG00000145949|Q86YV6-2|MYLK4	55.50420428727701	0.2510918378945873	3				NaN	NaN	0	NaN	2060	3203	5258
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5278	19.466	NaN	3044	30	0	508.73	0.214			+	13620	GMAAWCISIV	10	68	525.7594040687005	1049.504255204201	2	525.7598876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GMAAWCISIV_	REV__ENSG00000187066|ENST00000530719|TMEM262	55.50420428727701	0.4067289358710215	3				NaN	NaN	0	NaN	2070	3206	5277
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5279	19.47	NaN	9433.2	30	0	3146.1	0.106	+			42059	SYAKSTQRF	9	48	363.18963621609237	1086.547079248477	3	363.189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SYAKSTQRF_	ENST00000430580.6_1_1:16939836-16939869:-|nuORF	41.080066990542036	0.4075906340427724	3				NaN	NaN	0	NaN	2071	3206	5277
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5280	19.472	NaN	2786.3	30	0	386.5	0.106	+			1092	AELEKHMAA	9	62	500.25042620816237	NaN	0	500.25030517578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AELEKHMAA_	ENSG00000125844|ENST00000377813|RRBP1;ENST00000468428.1_1_20:17600178-17600424:-|nuORF;nc|ENSG00000125844|Q9P2E9-3|RRBP1	31.529811441608018	0.3183796599642538	3				NaN	NaN	0	NaN	2072	3206	5277
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5281	19.473	NaN	4242.2	30	0	1082.4	0.106	+			14223	GSSPVAMQK	9	51	452.7318390185123	903.4491251038246	2	452.73193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GSSPVAMQK_	ENSG00000035403|ENST00000211998|VCL;nc|ENSG00000035403|P18206-2|VCL	44.377184641726394	0.36891676396732553	3				NaN	NaN	0	NaN	2073	3206	5277
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5282	19.475	NaN	2607.8	30	0	992.28	0.106				-1	 	0	53	465.23340150532044	928.4522500774409	2	465.233154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2074	3206	5277
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5283	19.477	NaN	4230.9	30	0	513.16	0.035			+	50318	WTEVAVLVV	9	58	508.29472216145905	1014.5748913897181	2	508.2987976074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_WTEVAVLVV_	REV__ENSG00000114948|ENST00000264377|ADAM23;REV__nc|ENSG00000114948|O75077-2|ADAM23;REV__nc|ENSG00000114948|O75077-3|ADAM23	56.72105179125745	0.24094814563026265	3				NaN	NaN	0	NaN	2075	3206	5277
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5284	19.478	NaN	1344.4	30	0	184.85	0.138	+			19319	KAHIANPS	8	39	419.2324123619335	NaN	0	419.2325134277344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KAHIANPS_	ENSG00000136068|ENST00000295956|FLNB;FLNB|p.G1596Vfs*33|1|0.36|ENSG00000136068|chr3:58136090-58136090|G/-|frameshift_variant;nc|ENSG00000136068|O75369-2|FLNB;nc|ENSG00000136068|O75369-3|FLNB;nc|ENSG00000136068|O75369-4|FLNB;nc|ENSG00000136068|O75369-5|FLNB;nc|ENSG00000136068|O75369-6|FLNB;nc|ENSG00000136068|O75369-7|FLNB;nc|ENSG00000136068|O75369-8|FLNB;nc|ENSG00000136068|O75369-9|FLNB	37.15910966729921	1.7418937515398478	3				NaN	NaN	0	NaN	2076	3206	5277
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5292	19.499	NaN	8930.6	30	0	1751.4	0.214	+			40415	STVGTSNLK	9	60	453.74857929010534	905.4826056470107	2	453.7483825683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STVGTSNLK_	ENSG00000135111|ENST00000349155|TBX3;nc|ENSG00000135111|O15119-3|TBX3;nc|ENSG00000135111|O15119|TBX3;TBX3|p.K714Rfs*15|1|0.12|ENSG00000135111|chr12:114671931-114671932|TT/-|frameshift_variant;TBX3|p.S443Afs*194|1|1.0|ENSG00000135111|chr12:114674609-114674610|-/ATGGTGGCGGGGCT|frameshift_variant	77.31757898189308	0.1091473830098891	3				NaN	NaN	0	NaN	2081	3209	5291
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5293	19.503	NaN	2185.3	30	0	368.19	0.106	+			28335	NEHHVNATL	9	43	517.754679515014	1033.494806096828	2	517.7552490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NEHHVNATL_	ENSG00000111615|ENST00000229214|KRR1;ENST00000550023.5_1_12:75900251-75905383:-|nuORF;ENST00000550898.1_1_12:75900510-75905383:-|nuORF;KRR1|p.T261Nfs*3|1|0.24|ENSG00000111615|chr12:75503953-75503954|-/T|frameshift_variant;nc|ENSG00000111615|Q13601-2|KRR1	27.047317107675042	0.5504760921104335	3				NaN	NaN	0	NaN	2082	3209	5291
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5294	19.505	NaN	4193.3	30	0	1343.2	0.106	+			44975	TVCKLSVSK	9	64	511.2899405060849	1020.5653280789699	2	511.28948974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_TVC(Carbamidomethyl (C))KLSVSK_	ENSG00000127603|ENST00000564288|MACF1;nc|ENSG00000127603|O94854|MACF1;nc|ENSG00000127603|Q9UPN3-2|MACF1;nc|ENSG00000127603|Q9UPN3-3|MACF1;nc|ENSG00000127603|Q9UPN3-4|MACF1;nc|ENSG00000127603|Q9UPN3-5|MACF1;nc|ENSG00000127603|Q9UPN3|MACF1	47.95952297671804	0.32689736945648856	3				NaN	NaN	0	NaN	2083	3209	5291
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5295	19.506	NaN	3540.6	30	0	856.77	0.106			+	44231	TRRQVSPLVR	10	50	404.5837097167969	NaN	0	404.5837097167969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TRRQVSPLVR_	REV__ENST00000469163.1_1_22:45579971-45580253:+|nuORF	36.31764250033197	0.3809266711384728	3				NaN	NaN	0	NaN	2084	3209	5291
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5296	19.508	NaN	1166.7	30	0	273.06	0.106	+			4696	ATLTGGPAR	9	37	422.2380138742962	842.4614748153924	2	422.2378845214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATLTGGPAR_	ENSG00000055609|ENST00000262189|KMT2C;ENSG00000167548|ENST00000301067|KMT2D;KMT2C|p.I4868Lfs*37|1|0.28|ENSG00000055609|chr7:152138837-152138837|T/-|frameshift_variant;nc|ENSG00000055609|Q8NEZ4-2|KMT2C;nc|ENSG00000055609|Q8NEZ4-3|KMT2C;nc|ENSG00000167548|O14686-3|KMT2D	36.446750945000026	0.4619375763483977	3				NaN	NaN	0	NaN	2085	3209	5291
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5297	19.51	NaN	915.6	30	0	162.67	0.106	+			17256	HYDVDIKPEKR	11	49	467.2489318847656	NaN	0	467.2489318847656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HYDVDIKPEKR_	AGO4|p.E724Kfs*16|1|0.24|ENSG00000134698|chr1:35841744-35841745|AG/-|frameshift_variant;ENSG00000134698|ENST00000373210|AGO4	24.231819034082204	0.456735970842152	3				NaN	NaN	0	NaN	2086	3209	5291
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5298	19.512	NaN	861.55	30	0	76.574	0.034			+	31948	QQRGISKR	8	47	486.78956174900696	NaN	0	486.789794921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QQRGISKR_	REV__ENSG00000159307|ENST00000360835|SCUBE1;REV__SCUBE1|p.G673Wfs*39|1|0.31|ENSG00000159307|chr22:43214126-43214127|-/A|frameshift_variant	38.80614096846853	1.7418937515398478	3				NaN	NaN	0	NaN	2087	3209	5291
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5310	19.537	NaN	17336	30	0	2085.9	0.214				-1	 	0	71	503.22971357218637	1004.4448742111728	2	503.229248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2096	3212	5309
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5311	19.541	NaN	17237	30	0	3219.4	0.106	+			38855	SSNSMQTIQK	10	78	562.2739884873045	1122.5334240414088	2	562.274169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSNSMQTIQK_	ENSG00000111057|ENST00000388835|KRT18;ENST00000446618.1_1_22:19245879-19246326:+|nuORF;ENST00000447938.1_1_21:21797263-21797497:-|nuORF;ENST00000506277.1_1_5:36886275-36886596:+|nuORF	192.63874173313192	8.391941956668264E-06	3				NaN	NaN	0	NaN	2097	3212	5309
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5312	19.543	NaN	6593.8	30	0	1556.8	0.106			+	22183	KSSTAMADYC	10	62	538.7236198858399	1075.4326868384796	2	538.7235717773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KSSTAMADYC_	REV__ENSG00000115592|ENST00000439262|PRKAG3;REV__nc|ENSG00000115592|Q9UGI9-2|PRKAG3	34.172542307311794	0.6007644933930345	3				NaN	NaN	0	NaN	2098	3212	5309
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5313	19.545	NaN	10639	30	0	1803	0.106	+			5766	AVGNIKVTK	9	70	465.2925493561983	928.5705457791967	2	465.2921142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVGNIKVTK_	DDX18|p.K110Efs*11|1|0.42|ENSG00000088205|chr2:117817678-117817679|-/A|frameshift_variant;ENSG00000088205|ENST00000263239|DDX18	112.10723106719422	0.02684780151337622	3				NaN	NaN	0	NaN	2099	3212	5309
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5314	19.546	NaN	2760.3	30	0	428.61	0.106	+			3448	ASQQNATVLK	10	63	530.2935407622116	1058.572528591223	2	530.2933959960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASQQNATVLK_	ENST00000427574.6_1_11:76156149-76164398:+|nuORF	104.42354056486148	0.06456012287859861	3				NaN	NaN	0	NaN	2100	3212	5309
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5315	19.548	NaN	1989.6	30	0	295.19	0.037	+			21108	KKRDEYYK	8	55	565.3035539216149	1128.5925549100298	2	565.3038330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KKRDEYYK_	tr|U7STC2|U7STC2_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01297PE=4SV=1	49.44154591367651	0.597725784090933	3				NaN	NaN	0	NaN	2101	3212	5309
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5316	19.549	NaN	1895.2	30	0	307.21	0.14	+			1419	AEWDWLCV	8	52	511.2273228494214	1020.4400927656428	2	510.81378173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AEWDWLCV_	nc|ENSG00000111266|Q9BY84-2|DUSP16	42.47446043378293	0.6409579893742323	3				NaN	NaN	0	NaN	2102	3212	5309
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5323	19.569	NaN	5643.7	30	0	1094.5	0.214	+			27871	MTKCDVTGGK	10	67	520.249003541293	1038.4834541493858	2	520.2496948242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MTKCDVTGGK_	ITGB8|p.K437T|1|0.33|ENSG00000105855|chr7:20401749-20401749|A/C|missense_variant	98.62937762414208	0.0817671936103422	3				NaN	NaN	0	NaN	2106	3215	5322
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5324	19.572	NaN	6266.7	30	0	2616.1	0.106	+			2542	AQAKIDRYT	9	40	355.8612324790313	1064.5618680372938	3	355.8607482910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AQAKIDRYT_	ENSG00000120254|ENST00000367321|MTHFD1L;ESR1-MTHFD1L|1|fusion;ESR1-MTHFD1L|2|fusion	32.81241826257853	0.4965981579233955	3				NaN	NaN	0	NaN	2107	3215	5322
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5325	19.574	NaN	2376.3	30	0	277.01	0.106	+			9802	EPCGSLSETV	10	46	511.2273228494214	1020.4400927656428	2	511.2269287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EPCGSLSETV_	ENSG00000188895|ENST00000398532|MSL1;MSL1|p.F555Sfs*10|1|0.31|ENSG00000188895|chr17:40133637-40133637|T/-|frameshift_variant;MSL1|p.Q528Kfs*43|1|0.03|ENSG00000188895|chr17:40133556-40133557|-/AAAAACAAACCAAACAA|frameshift_variant;nc|ENSG00000188895|Q68DK7-2|MSL1;nc|ENSG00000188895|Q68DK7-3|MSL1	32.81241826257853	0.6118718159329168	3				NaN	NaN	0	NaN	2108	3215	5322
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5326	19.576	NaN	3782.8	30	0	604.38	0.106	+			27814	MSLDIVLK	8	67	459.7707664908868	917.5269800485736	2	459.7699279785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MSLDIVLK_	ENSG00000100151|ENST00000356976|PICK1;ENST00000484021.5_1_22:38453431-38470088:+|nuORF;nc|ENSG00000100151|Q9NRD5-2|PICK1	60.97194046774394	0.49215940876911696	3				NaN	NaN	0	NaN	2109	3215	5322
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5327	19.578	NaN	4968.2	30	0	1180.3	0.106			+	3190	ASKKIEGKF	9	37	336.53452244120996	1006.5817379238299	3	336.8684997558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASKKIEGKF_	REV__tr|U7SUA5|U7SUA5_FUSNUOligopeptidaseFOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01160PE=3SV=1	17.364965105453717	0.6112419832031293	3				NaN	NaN	0	NaN	2110	3215	5322
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5328	19.579	NaN	1769.2	30	0	154.55	0.106	+			26252	LSSSPNRIP	9	51	485.76840640412536	NaN	0	485.7682800292969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSSSPNRIP_	ENSG00000156504|ENST00000343004|PABIR2;nc|ENSG00000156504|Q7Z309-3|PABIR2;nc|ENSG00000156504|Q7Z309-4|PABIR2	45.9519527083369	0.2345902329052062	3				NaN	NaN	0	NaN	2111	3215	5322
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5329	19.581	NaN	2130.8	30	0	191.67	0.034	+			5519	AVAGSSPRLP	10	55	477.771690442076	NaN	0	477.77203369140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AVAGSSPRLP_	ENSG00000148384|ENST00000371712|INPP5E;nc|ENSG00000148384|Q9NRR6-2|INPP5E	44.377184641726394	0.34115073642966565	3				NaN	NaN	0	NaN	2112	3215	5322
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5339	19.603	NaN	10625	30	0	5119.3	0.214	+			32152	QSPQGRVM	8	55	451.72964079550627	901.4447286578126	2	451.7290954589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QSPQGRVM_	ENSG00000169564|ENST00000303577|PCBP1	74.25504064058377	0.37144338840759816	3				NaN	NaN	0	NaN	2119	3218	5338
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5340	19.607	NaN	992.05	30	0	152.33	0.106	+			40511	STYPAQNGQVK	11	51	596.8021784223006	1191.589803911401	2	596.8023071289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STYPAQNGQVK_	ENSG00000081237|ENST00000442510|PTPRC;nc|ENSG00000081237|P08575-10|PTPRC;nc|ENSG00000081237|P08575-4|PTPRC;nc|ENSG00000081237|P08575-5|PTPRC;nc|ENSG00000081237|P08575-6|PTPRC;nc|ENSG00000081237|P08575-7|PTPRC;nc|ENSG00000081237|P08575-8|PTPRC;nc|ENSG00000081237|P08575-9|PTPRC;PTPRC|p.N1239Tfs*17|1|0.43|ENSG00000081237|chr1:198755972-198755972|A/-|frameshift_variant	36.446750945000026	0.6065623449959539	3				NaN	NaN	0	NaN	2120	3218	5338
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5341	19.609	NaN	4782	30	0	1391.1	0.106	+			16807	HPDKKIVAY	9	60	535.8041254036734	1069.5936978741468	2	535.803955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HPDKKIVAY_	ATXN10|p.F455Lfs*10|1|0.3|ENSG00000130638|chr22:45843115-45843115|T/-|frameshift_variant;ENSG00000130638|ENST00000252934|ATXN10;nc|ENSG00000130638|Q9UBB4-2|ATXN10	78.26377905018397	0.10505600812668463	3				NaN	NaN	0	NaN	2121	3218	5338
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5342	19.61	NaN	3148.9	30	0	363.08	0.106	+			40620	SVAKTILKR	9	65	508.33519054370345	1014.6558281542069	2	508.33453369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVAKTILKR_	ENSG00000114978|ENST00000396049|MOB1A;ENSG00000173542|ENST00000309395|MOB1B;ENST00000497054.5_1_2:74386211-74405801:-|nuORF;nc|ENSG00000173542|Q7L9L4-2|MOB1B	59.93077597824379	0.21419174904018318	3				NaN	NaN	0	NaN	2122	3218	5338
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5343	19.612	NaN	2074.7	30	0	351.55	0.106	+			29785	PILFASAALAL	11	66	543.8322247433993	1085.6498965535984	2	544.336669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PILFASAALAL_	ENSG00000159164|ENST00000369146|SV2A	29.550750289552195	0.6798279264880025	3				NaN	NaN	0	NaN	2123	3218	5338
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5344	19.614	NaN	2066	30	0	529.05	0.033			+	15278	GTTVSLNSL	9	44	446.2430306438378	890.4715083544756	2	446.242431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTTVSLNSL_	REV__ENSG00000135577|ENST00000258042|NMBR	45.97224482568171	0.3502073465782774	3				NaN	NaN	0	NaN	2124	3218	5338
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5345	19.614	NaN	983.84	30	0	119.78	0.139	+			9416	EKIKEFSP	8	49	489.26632584939347	NaN	0	489.2661437988281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EKIKEFSP_	tr|U7SS49|U7SS49_FUSNUMobA/MobLproteindomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01543PE=3SV=1	35.61828744233558	1.7418937515398478	3				NaN	NaN	0	NaN	2125	3218	5338
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5351	19.631	NaN	7540.1	30	0	2118.2	0.214	+			12647	GEIKIHKM	8	62	478.27352728309904	954.5325016329981	2	478.27294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEIKIHKM_	ENSG00000050405|ENST00000341247|LIMA1;ENST00000552045.1_1_12:50589526-50594661:-|nuORF;LIMA1|p.T536Lfs*38|2|0.4|ENSG00000050405|chr12:50177739-50177739|G/-|frameshift_variant;nc|ENSG00000050405|Q9UHB6-2|LIMA1;nc|ENSG00000050405|Q9UHB6-4|LIMA1;nc|ENSG00000050405|Q9UHB6-5|LIMA1	74.25504064058377	0.37144338840759816	3				NaN	NaN	0	NaN	2128	3221	5350
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5352	19.634	NaN	2756.4	30	0	432.68	0.106			+	573	ADIAKENR	8	58	458.74592294358064	NaN	0	458.2662353515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ADIAKENR_	REV__tr|U7SMJ5|U7SMJ5_FUSNUGeneralstressproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01893PE=4SV=1	47.657333605630114	1.7418937515398478	3				NaN	NaN	0	NaN	2129	3221	5350
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5353	19.636	NaN	2001.7	30	0	230.14	0.106			+	33007	REFLADPQAD	10	63	581.2785259821601	NaN	0	581.2783203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_REFLADPQAD_	REV__ENSG00000180815|ENST00000338883|MAP3K15;REV__ENST00000518578.5_1_X:19378869-19431499:-|nuORF;REV__nc|ENSG00000180815|Q6ZN16-2|MAP3K15;REV__nc|ENSG00000180815|Q6ZN16-3|MAP3K15	54.776311868738084	0.27540594196716844	3				NaN	NaN	0	NaN	2130	3221	5350
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5354	19.638	NaN	2401.1	30	0	309.33	0.106	+			29824	PKQNDRQE	8	60	507.7504098296008	1013.4862667260016	2	507.7496643066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PKQNDRQE_	ENST00000440665.5_1_1:231663116-231663876:-|nuORF	51.33545320467046	0.5859736979383976	3				NaN	NaN	0	NaN	2131	3221	5350
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5355	19.64	NaN	1822.9	30	0	292.26	0.106			+	30766	QDQLVRIL	8	52	492.7957930900371	983.5770332468742	2	492.7953796386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QDQLVRIL_	REV__ENSG00000135052|ENST00000388712|GOLM1;REV__GOLM1|p.K180Nfs*4|1|0.16|ENSG00000135052|chr9:86040796-86040797|-/A|frameshift_variant;REV__GOLM1|p.N182Efs*2|1|0.23|ENSG00000135052|chr9:86040796-86040797|-/T|frameshift_variant;REV__nc|ENSG00000135052|Q8NBJ4-2|GOLM1	35.61828744233558	0.6843154725607303	3				NaN	NaN	0	NaN	2132	3221	5350
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5356	19.641	NaN	1946.6	30	0	380.71	0.106	+			3055	ASFKTVIKK	9	49	341.2184143066406	NaN	0	341.2184143066406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASFKTVIKK_	CCDC15|p.K194Rfs*29|2|0.35|ENSG00000149548|chr11:124975153-124975153|A/-|frameshift_variant;CCDC15|p.L510Cfs*138|1|0.15|ENSG00000149548|chr11:124987750-124987750|T/-|frameshift_variant;CCDC15|p.S196Ifs*6|2|0.29|ENSG00000149548|chr11:124975152-124975153|-/A|frameshift_variant;ENSG00000149548|ENST00000344762|CCDC15	42.86426827375447	0.2558691296974908	3				NaN	NaN	0	NaN	2133	3221	5350
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5357	19.643	NaN	4920.7	30	0	1149.3	0.038	+			14665	GTIEKSKLITK	11	70	609.3775411341292	1216.7405293350582	2	609.3765869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GTIEKSKLITK_	ENSG00000144426|ENST00000683969|NBEAL1;NBEAL1|p.A1274Qfs*17|1|0.1|ENSG00000144426|chr2:203135766-203135766|A/-|frameshift_variant;NBEAL1|p.F1670Lfs*25|1|0.21|ENSG00000144426|chr2:203144843-203144843|T/-|frameshift_variant;NBEAL1|p.F2315Lfs*2|1|0.17|ENSG00000144426|chr2:203193900-203193900|T/-|frameshift_variant;NBEAL1|p.K2562Rfs*15|1|0.41|ENSG00000144426|chr2:203209306-203209306|A/-|frameshift_variant;NBEAL1|p.N2072Kfs*10|1|0.35|ENSG00000144426|chr2:203172825-203172826|-/A|frameshift_variant;NBEAL1|p.T1311Nfs*3|1|0.08|ENSG00000144426|chr2:203135875-203135876|-/A|frameshift_variant;nc|ENSG00000144426|Q6ZS30-1|NBEAL1;nc|ENSG00000144426|Q6ZS30|NBEAL1	139.7601822506043	0.0005276873573507997	3				NaN	NaN	0	NaN	2134	3221	5350
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5367	19.665	NaN	7516.3	30	0	859.53	0.214	+			42918	TEIEKARAV	9	69	508.79088160059007	1015.5672102679802	2	508.7902526855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEIEKARAV_	ENSG00000148843|ENST00000369797|PDCD11	143.37361013837676	0.008897369944672323	3				NaN	NaN	0	NaN	2141	3224	5366
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5368	19.669	NaN	6645.1	30	0	1604.3	0.106	+			40356	STTRLYLRK	9	51	379.8966265013983	1136.668050104395	3	379.8960876464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STTRLYLRK_	ENSG00000051180|ENST00000267868|RAD51;nc|ENSG00000051180|Q06609-2|RAD51;nc|ENSG00000051180|Q06609-4|RAD51	37.50817390946774	0.44948750990682723	3				NaN	NaN	0	NaN	2142	3224	5366
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5369	19.671	NaN	1964.5	30	0	678.21	0.106	+			45832	VAKKKMMRTHL	11	42	448.26501262168506	1341.7732084652553	3	448.2646179199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VAKKKMMRTHL_	CHD4|p.L1194R|1|0.22|ENSG00000111642|chr12:6587834-6587834|A/C|missense_variant	14.693671053092006	0.8016877026820449	3				NaN	NaN	0	NaN	2143	3224	5366
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5370	19.672	NaN	2259.8	30	0	400.99	0.106	+			16808	HPDKKIVAY	9	52	357.53811155065347	1069.5925052521604	3	357.5377502441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HPDKKIVAY_	ATXN10|p.F455Lfs*10|1|0.3|ENSG00000130638|chr22:45843115-45843115|T/-|frameshift_variant;ENSG00000130638|ENST00000252934|ATXN10;nc|ENSG00000130638|Q9UBB4-2|ATXN10	44.116797842482775	0.37197099687881774	3				NaN	NaN	0	NaN	2144	3224	5366
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5371	19.674	NaN	1874.6	30	0	238.3	0.106	+			15912	HAASNPPAQY	10	52	528.2489332149122	1054.4833134966243	2	528.2490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HAASNPPAQY_	CEACAM6|p.S270T|1|0.25|ENSG00000086548|chr19:41762073-41762073|T/A|missense_variant;ENSG00000086548|ENST00000199764|CEACAM6;ENSG00000105388|ENST00000221992|CEACAM5;ENSG00000105388|ENST00000221992|CEACAM5;nc|ENSG00000105388|P06731-2|CEACAM5;nc|ENSG00000105388|P06731-2|CEACAM5	49.536043120802724	0.461275219792494	3				NaN	NaN	0	NaN	2145	3224	5366
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5372	19.676	NaN	2193.3	30	0	795.11	0.106				-1	GKKMTKMPSAL	11	42	403.22283504467555	NaN	0	402.88726806640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_GKKMTKM(Oxidation (M))PSAL_	ENSG00000214954|ENST00000448384|LRRC69;nc|ENSG00000214954|Q6ZNQ3-2|LRRC69	36.31764250033197	0.4035636655321173	3				NaN	NaN	0	NaN	2146	3224	5366
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5373	19.678	NaN	1205	30	0	298.26	0.034	+			30054	PPYFTALPG	9	44	481.75196293278486	NaN	0	481.7516784667969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PPYFTALPG_	IGSF9B|p.V424A|1|0.41|ENSG00000080854|chr11:133931550-133931550|A/G|missense_variant	33.51558372728122	0.30835390848773375	3				NaN	NaN	0	NaN	2147	3224	5366
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5378	19.692	NaN	6517.6	30	0	1128.1	0.214	+			2985	ASFDKAKLK	9	63	504.29846411061	1006.58237528802	2	504.2976379394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASFDKAKLK_	ENSG00000034510|ENST00000233143|TMSB10	72.87924865735499	0.12833875048249987	3				NaN	NaN	0	NaN	2149	3227	5377
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5379	19.696	NaN	2398	30	0	397.91	0.106			+	127	AAGAAMAAGLA	11	52	437.726441931871	873.4383309305421	2	437.7262878417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAGAAMAAGLA_	REV__ENSG00000196475|ENST00000358842|GK2;REV__ENSG00000198814|ENST00000427190|GK;REV__ENSG00000229894|ENST00000505354|GK3;REV__GK2|p.F535Lfs*2|1|0.08|ENSG00000196475|chr4:79406596-79406596|A/-|frameshift_variant;REV__nc|ENSG00000198814|P32189-1|GK;REV__nc|ENSG00000198814|P32189-2|GK;REV__nc|ENSG00000198814|P32189-4|GK	71.37791200682192	0.22425249707831713	3				NaN	NaN	0	NaN	2150	3227	5377
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5380	19.698	NaN	1982	30	0	234.18	0.106			+	31938	QQQILGVGGK	10	63	514.2987363290239	1026.5829197248477	2	514.8001098632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QQQILGVGGK_	REV__TEX29|p.K53Nfs*83|1|0.1|ENSG00000153495|chr13:111328281-111328282|-/ACCTGGG|frameshift_variant	40.77816245573522	0.5419747034533848	3				NaN	NaN	0	NaN	2151	3227	5377
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5381	19.699	NaN	1016.2	30	0	107.18	0.106	+			34884	RYVTHNRAH	9	50	577.3029529885242	1152.5913530438484	2	577.3024291992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RYVTHNRAH_	ENSG00000078401|ENST00000379375|EDN1	37.15910966729921	0.4535818937225704	3				NaN	NaN	0	NaN	2152	3227	5377
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5382	19.701	NaN	1680.8	30	0	247.22	0.036			+	21526	KNSHQKQLK	9	57	555.8229161613015	1109.6312793894028	2	556.3248901367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KNSHQKQLK_	REV__ENST00000503900.1_1_5:75206464-75206944:+|nuORF	80.45461616416974	0.09558281504443908	3				NaN	NaN	0	NaN	2153	3227	5377
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5388	19.716	NaN	3414.6	30	0	398.25	0.214	+			5367	ATYAGVGANK	10	55	476.2478332920572	950.4811136509144	2	476.2477111816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATYAGVGANK_	ENSG00000178038|ENST00000318962|ALS2CL;ENST00000383742.7_2_3:46712476-46718839:-|nuORF;ENST00000434140.5_2_3:46717393-46723043:-|nuORF;ENST00000486301.5_1_3:46717393-46718248:-|nuORF;nc|ENSG00000178038|Q60I27-2|ALS2CL;nc|ENSG00000178038|Q60I27-3|ALS2CL;nc|ENSG00000178038|Q60I27-6|ALS2CL	95.81516180277367	0.09778090853194907	3				NaN	NaN	0	NaN	2156	3230	5387
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5389	19.719	NaN	2447.4	30	0	1164.5	0.106			+	47528	VQQTVQAL	8	39	443.7535723343259	885.4925917354518	2	443.7535705566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VQQTVQAL_	REV__ENST00000596586.5_3_19:46283105-46288963:-|nuORF	37.15910966729921	0.6739408393984688	3				NaN	NaN	0	NaN	2157	3230	5387
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5390	19.721	NaN	1850.5	30	0	242.86	0.106	+			43084	TEMGHGTHL	9	54	491.72458843650975	981.4346239398195	2	491.72393798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TEMGHGTHL_	ACOX1|p.N501Tfs*6|1|0.47|ENSG00000161533|chr17:75949577-75949577|T/-|frameshift_variant;ENSG00000161533|ENST00000293217|ACOX1;ENST00000591857.5_1_17:73953534-73975166:-|nuORF;nc|ENSG00000161533|Q15067-3|ACOX1;nc|ENSG00000161533|Q15067|ACOX1	56.72105179125745	0.24094814563026265	3				NaN	NaN	0	NaN	2158	3230	5387
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5391	19.723	NaN	1791.1	30	0	181.5	0.106	+			37019	SIQNQMQSK	9	60	532.2639119956268	NaN	0	532.2637329101562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SIQNQMQSK_	ENSG00000158985|ENST00000505065|CDC42SE2	66.96192283764107	0.11962625698446946	3				NaN	NaN	0	NaN	2159	3230	5387
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5392	19.725	NaN	1063.5	30	0	218.3	0.106	+			44228	TRRLMHAHRR	10	34	667.3793107474403	1332.7440685616805	2	667.8801879882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TRRLMHAHRR_	ENST00000361813.5_1_1:156220252-156220381:-|nuORF	20.030474535948922	0.7146664069068879	3				NaN	NaN	0	NaN	2160	3230	5387
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5393	19.727	NaN	4294.9	30	0	363.75	0.033	+			12392	GEAAKSVKL	9	57	451.7691995967335	901.523846260267	2	451.768798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GEAAKSVKL_	ENSG00000189334|ENST00000344616|S100A14	101.45984612302182	0.0377122763612125	3				NaN	NaN	0	NaN	2161	3230	5387
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5399	19.741	NaN	11486	30	0	3231	0.214	+			44649	TTGAVLGQK	9	69	437.7534226841663	873.4922924351326	2	437.75323486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTGAVLGQK_	chr3:58640177-58645509|101|32.06|0.87|5.2|-|2|FAM3D,FAM3D|2;ENSG00000198643|ENST00000358781|FAM3D;FAM3D|p.G139Vfs*16|1|0.28|ENSG00000198643|chr3:58637183-58637183|C/-|frameshift_variant	122.1759843771914	0.019882474861609503	3				NaN	NaN	0	NaN	2164	3233	5398
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5400	19.745	NaN	4782.2	30	0	1149.2	0.106	+			20689	KGPGAGSAL	9	52	379.21411525082107	756.4136775684422	2	379.2138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KGPGAGSAL_	AP2A1|p.Q851Rfs*5|1|0.43|ENSG00000196961|chr19:49805672-49805672|C/-|frameshift_variant;ENSG00000196961|ENST00000354293|AP2A1;ENST00000597774.5_1_19:50303271-50309027:+|nuORF;ENST00000600466.1_1_19:50304984-50305399:+|nuORF;nc|ENSG00000196961|O95782|AP2A1	54.776311868738084	0.25715957988447635	3				NaN	NaN	0	NaN	2165	3233	5398
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5401	19.747	NaN	3013.3	30	0	1589.3	0.106	+			1246	AERPGEAAVA	10	50	485.7515343880309	969.4885158428618	2	485.75140380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AERPGEAAVA_	ENSG00000277443|ENST00000612661|MARCKS	29.170058357718403	0.6416167986984785	3				NaN	NaN	0	NaN	2166	3233	5398
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5402	19.749	NaN	1135	30	0	228.13	0.106	+			41178	SVKWKKSD	8	34	326.51892445735916	976.5349439722775	3	326.5183410644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVKWKKSD_	ENSG00000077147|ENST00000371142|TM9SF3;TM9SF3|p.F404Lfs*6|3|0.31|ENSG00000077147|chr10:96533164-96533164|A/-|frameshift_variant	19.359975847455235	0.7988239741663654	3				NaN	NaN	0	NaN	2167	3233	5398
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5403	19.75	NaN	1289.7	30	0	193.1	0.034				-1	FPPPPCAQ	8	45	457.2162780761719	NaN	0	457.2162780761719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_FPPPPC(Carbamidomethyl (C))AQ_	ENST00000479237.5_1_9:131773211-131773688:-|nuORF	39.021493756699265	1.7418937515398478	3				NaN	NaN	0	NaN	2168	3233	5398
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5411	19.768	NaN	7630	30	0	2503	0.214	+			32108	QSHLRLTLK	9	64	548.3354160828109	1094.6562792324216	2	548.3353881835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QSHLRLTLK_	ENSG00000131864|ENST00000254181|USP29;USP29|p.V357Sfs*21|1|0.27|ENSG00000131864|chr19:57129738-57129738|A/-|frameshift_variant	69.6276240434122	0.14239879520340665	3				NaN	NaN	0	NaN	2173	3236	5410
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5412	19.772	NaN	1946.5	30	0	956.2	0.106				-1	 	0	33	399.2117863561228	796.4090197790456	2	399.2113342285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2174	3236	5410
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5413	19.774	NaN	2234.2	30	0	1071.2	0.039			+	-1	VSMHHRRRR	9	40	417.56302216963746	1249.6672371091124	3	417.5625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_VSM(Oxidation (M))HHRRRR_	REV__CACNA1E|p.F1412Lfs*21|1|0.36|ENSG00000198216|chr1:181757026-181757027|-/C|frameshift_variant;REV__CACNA1E|p.L1080Ffs*10|1|0.17|ENSG00000198216|chr1:181733725-181733726|-/T|frameshift_variant;REV__ENSG00000198216|ENST00000367573|CACNA1E;REV__nc|ENSG00000198216|Q15878-2|CACNA1E;REV__nc|ENSG00000198216|Q15878-3|CACNA1E	26.69291269510374	0.5537881896960711	3				NaN	NaN	0	NaN	2175	3236	5410
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5422	19.794	NaN	9251.5	30	0	1600.8	0.214	+			3113	ASGSFKLNK	9	64	476.26702060407143	950.5194882749429	2	476.2661437988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASGSFKLNK_	ENSG00000124575|ENST00000244534|H1-3;ENSG00000124610|ENST00000244573|H1-1;ENSG00000168298|ENST00000304218|H1-4;ENSG00000184357|ENST00000331442|H1-5;ENSG00000187837|ENST00000343677|H1-2	159.27591364854348	0.004707062175358555	3				NaN	NaN	0	NaN	2181	3239	5421
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5423	19.797	NaN	2580	30	0	361.56	0.106				-1	 	0	38	332.7107973749266	663.4070418166532	2	332.7105407714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2182	3239	5421
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5424	19.799	NaN	2698.1	30	0	1007	0.106			+	48972	VVGGKPGLG	9	45	392.2403009257699	782.4660489183398	2	392.23980712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVGGKPGLG_	REV__ENST00000409858.7_1_9:139977361-139977631:+|nuORF	31.954861631926434	0.5046124803899898	3				NaN	NaN	0	NaN	2183	3239	5421
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5425	19.801	NaN	1905.6	30	0	411.16	0.106			+	23748	LCAWAVFR	8	55	483.25611314328546	964.4976733533709	2	483.25531005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LCAWAVFR_	REV__ENST00000544275.1_1_16:19659174-19663786:+|nuORF	31.57888975003103	0.7155046476286219	3				NaN	NaN	0	NaN	2184	3239	5421
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5426	19.803	NaN	1826.3	30	0	166.39	0.04	+			8934	EEWEDTKDSKE	11	57	698.2987623586151	1394.5829717840302	2	698.2978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EEWEDTKDSKE_	ENSG00000162687|ENST00000294725|KCNT2;ENST00000451324.6_1_1:196197356-196228734:-|nuORF;ENST00000498426.5_1_1:196197356-196286329:-|nuORF;ENST00000610076.1_1_1:196227273-196577439:-|nuORF;nc|ENSG00000162687|Q6UVM3-2|KCNT2;nc|ENSG00000162687|Q6UVM3-3|KCNT2;nc|ENSG00000162687|Q6UVM3-4|KCNT2	33.921630207806714	0.6339809607503234	3				NaN	NaN	0	NaN	2185	3239	5421
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5435	19.823	NaN	3812.5	30	0	701.9	0.214	+			41791	SVSQKLMAK	9	62	496.28425253700027	990.5539521408006	2	496.2834167480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSQKLMAK_	ENSG00000137200|ENST00000373451|CMTR1	85.16082228582465	0.07850854922700509	3				NaN	NaN	0	NaN	2191	3242	5434
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5436	19.826	NaN	3379.2	30	0	581.99	0.106	+			22195	KSTELLIRK	9	67	544.3456761840492	1086.6767994348984	2	544.3455810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KSTELLIRK_	ENSG00000132475|ENST00000254810|H3-3B;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000168148|ENST00000366696|H3-4;ENSG00000183598|ENST00000331491|H3C13;ENSG00000188375|ENST00000340398|H3-5;ENSG00000197153|ENST00000359303|H3C12;ENSG00000197409|ENST00000356476|H3C4;ENSG00000203811|ENST00000369158|H3C14;ENSG00000203852|ENST00000403683|H3C15;ENSG00000273983|ENST00000614378|H3C8;ENSG00000274750|ENST00000614911|H3C6;ENSG00000275379|ENST00000616365|H3C11;ENSG00000275714|ENST00000613854|H3C1;ENSG00000277775|ENST00000618052|H3C7;ENSG00000278828|ENST00000685041|H3C10;ENST00000401004.2_1:120904811-120905087:+|nuORF;ENST00000586518.1_1_17:73774674-73775034:-|nuORF;nc|ENSG00000273213|Q5TEC6|H3-7	58.2462437865262	0.22823408064396822	3				NaN	NaN	0	NaN	2192	3242	5434
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5437	19.828	NaN	1953.8	30	0	232.92	0.106	+			15422	GTYQDRLTK	9	55	541.2857878382455	1080.5570227432909	2	541.2860717773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTYQDRLTK_	ENSG00000164758|ENST00000297347|MED30;ENST00000519879.1_1_8:118533115-118541135:+|nuORF;nc|ENSG00000164758|Q96HR3-2|MED30	43.41853373365257	0.38016135533131235	3				NaN	NaN	0	NaN	2193	3242	5434
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5438	19.83	NaN	1662.4	30	0	157.98	0.106			+	32198	QSVLSPSALMC	11	65	604.7884396934166	1207.5623264536332	2	604.7902221679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_QSVLSPSALM(Oxidation (M))C(Carbamidomethyl (C))_	REV__ENSG00000187736|ENST00000356853|NHEJ1;REV__nc|ENSG00000187736|Q9H9Q4-2|NHEJ1	56.43379154798735	0.3552884390983883	3				NaN	NaN	0	NaN	2194	3242	5434
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5439	19.832	NaN	1940.8	30	0	1096.1	0.106			+	45995	VATVRAGEAV	10	27	324.8541336182218	971.5405714548654	3	324.85382080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VATVRAGEAV_	REV__ENSG00000196199|ENST00000361479|MPHOSPH8;REV__MPHOSPH8|p.K169Qfs*28|1|0.35|ENSG00000196199|chr13:19646577-19646578|-/C|frameshift_variant;REV__MPHOSPH8|p.K362Sfs*14|1|0.32|ENSG00000196199|chr13:19647154-19647154|A/-|frameshift_variant;REV__MPHOSPH8|p.N459Mfs*20|1|0.37|ENSG00000196199|chr13:19650054-19650054|A/-|frameshift_variant;REV__nc|ENSG00000196199|Q99549-2|MPHOSPH8	23.04248740728303	0.69165701907106	3				NaN	NaN	0	NaN	2195	3242	5434
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5440	19.834	NaN	1098.3	30	0	226.66	0.106			+	20923	KIYGSKGGA	9	42	440.7478942871094	NaN	0	440.7478942871094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KIYGSKGGA_	REV__ENST00000285013.10_2_17:33774297-33775769:-|nuORF;REV__ENST00000524511.5_2_17:33774297-33775374:-|nuORF	42.396135135203025	0.2590952873412954	3				NaN	NaN	0	NaN	2196	3242	5434
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5441	19.835	NaN	3342.6	30	0	442.29	0.035	+			35825	SEDAEKKVL	9	67	509.7766526771131	1017.5387524210262	2	509.77435302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SEDAEKKVL_	ENSG00000060138|ENST00000228251|YBX3;ENST00000566722.1_1_16:31580383-31580761:-|nuORF;nc|ENSG00000060138|P16989-2|YBX3;nc|ENSG00000060138|P16989-3|YBX3	93.5975768576971	0.05472259948179787	3				NaN	NaN	0	NaN	2197	3242	5434
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5449	19.854	NaN	3131.4	30	0	447.11	0.214	+			1203	AEQESARQL	9	57	516.2600761142843	1030.5055992953685	2	516.2601318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEQESARQL_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	109.47833844074708	0.029530294723441826	3				NaN	NaN	0	NaN	2202	3245	5448
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5450	19.857	NaN	1055.3	30	0	347.49	0.106			+	27997	MVVCKESGCSP	11	37	570.2483099777819	1138.4820670223637	2	570.2479858398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MVVCKESGCSP_	REV__ENSG00000154645|ENST00000299295|CHODL;REV__nc|ENSG00000154645|Q9H9P2-2|CHODL;REV__nc|ENSG00000154645|Q9H9P2-3|CHODL;REV__nc|ENSG00000154645|Q9H9P2-4|CHODL	17.468008924990375	0.788697330333842	3				NaN	NaN	0	NaN	2203	3245	5448
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5451	19.859	NaN	1058.1	30	0	121.64	0.106				-1	CRNLLGLLDND	11	51	651.8262712770546	1301.6379896209091	2	651.8261108398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_C(Carbamidomethyl (C))RNLLGLLDND_	ENSG00000179021|ENST00000318887|C3orf38;nc|nan|Q5JPI3-2|C3orf38	41.42661286455405	0.5384226294179143	3				NaN	NaN	0	NaN	2204	3245	5448
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5452	19.861	NaN	2648.4	30	0	1623.7	0.106				-1	GLPALRKMM	9	28	344.8613704906932	1031.5622820722797	3	344.86114501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_GLPALRKM(Oxidation (M))M_	ENST00000531709.6_1_11:62571294-62572845:-|nuORF	15.641811463095205	0.6112419832031292	3				NaN	NaN	0	NaN	2205	3245	5448
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5453	19.863	NaN	913.94	30	0	143.72	0.106			+	50072	WGAGALAAV	9	43	408.2217967757049	NaN	0	408.2220764160156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_WGAGALAAV_	REV__ENST00000550078.2_2_1:203764956-203765340:+|nuORF	49.21078951299608	0.21213183292994464	3				NaN	NaN	0	NaN	2206	3245	5448
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5454	19.864	NaN	1003.1	30	0	103.24	0.106			+	17656	IEKHNYNK	8	47	523.2753940536222	1044.5362351740444	2	523.2750854492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IEKHNYNK_	REV__ENSG00000141198|ENST00000575882|TOM1L1;REV__nc|ENSG00000141198|O75674-2|TOM1L1	31.954861631926434	0.7126016770032289	3				NaN	NaN	0	NaN	2207	3245	5448
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5455	19.866	NaN	2210.4	30	0	453.33	0.036	+			20409	KETITKTEY	9	64	556.795967417637	1111.577381902074	2	556.7967529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KETITKTEY_	tr|U7SUG0|U7SUG0_FUSNULipopolysaccharideexportsystempermeaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01410PE=4SV=1	42.396135135203025	0.392153681582562	3				NaN	NaN	0	NaN	2208	3245	5448
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5464	19.886	NaN	11112	30	0	2930.1	0.214	+			44394	TSLKSIMKK	9	68	518.3153649065887	1034.6161768799773	2	518.3155517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSLKSIMKK_	ENSG00000132854|ENST00000371153|KANK4;nc|ENSG00000132854|Q5T7N3-2|KANK4	152.06079943815163	0.00638878961959199	3				NaN	NaN	0	NaN	2214	3248	5463
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5465	19.89	NaN	12731	30	0	3532.8	0.106	+			24605	LGRESSPGP	9	67	450.232985230533	898.451417527866	2	450.2326354980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LGRESSPGP_	ENST00000306801.7_1_17:78939591-78939999:+|nuORF	53.351449002276354	0.2690372970092375	3				NaN	NaN	0	NaN	2215	3248	5463
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5466	19.892	NaN	8830.1	30	0	2842.9	0.106	+			39600	STHGTFLNK	9	63	335.51040391851063	1003.509382355732	3	335.5101623535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STHGTFLNK_	ENSG00000163798|ENST00000326019|SLC4A1AP;nc|ENSG00000163798|Q9BWU0-1|SLC4A1AP;SLC4A1AP|p.F378Lfs*8|1|0.18|ENSG00000163798|chr2:27667375-27667375|T/-|frameshift_variant;SLC4A1AP|p.L669Tfs*8|1|0.38|ENSG00000163798|chr2:27685159-27685160|-/A|frameshift_variant	49.44154591367651	0.3095138337212152	3				NaN	NaN	0	NaN	2216	3248	5463
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5467	19.894	NaN	3755.4	30	0	725.69	0.106	+			27054	MADENKNEY	9	67	557.2297669703212	1112.4449810074423	2	557.2297973632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MADENKNEY_	ENSG00000137942|ENST00000271234|FNBP1L;FNBP1L|p.T313Pfs*3|1|0.22|ENSG00000137942|chr1:93534852-93534852|A/-|frameshift_variant;nc|ENSG00000137942|Q5T0N5-2|FNBP1L;nc|ENSG00000137942|Q5T0N5-3|FNBP1L;nc|ENSG00000137942|Q5T0N5-4|FNBP1L;nc|ENSG00000137942|Q5T0N5-5|FNBP1L	101.60071028292904	0.0375685401170269	3				NaN	NaN	0	NaN	2217	3248	5463
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5468	19.895	NaN	2049.3	30	0	179.18	0.106	+			1274	AESGVERQV	9	56	487.7489726663577	973.4833923995154	2	487.7488098144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AESGVERQV_	ENSG00000142507|ENST00000270586|PSMB6;ENST00000575643.1_1_17:4701246-4701714:+|nuORF	85.86182877749512	0.07653218437724067	3				NaN	NaN	0	NaN	2218	3248	5463
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5469	19.897	NaN	3716.6	30	0	2112.2	0.106	+			19588	KDEENGNRGD	10	45	567.2443702300386	1132.4741875268771	2	567.2449340820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KDEENGNRGD_	ENST00000401578.2_1_6:80779646-80779811:-|nuORF	44.377184641726394	0.5088115166961078	3				NaN	NaN	0	NaN	2219	3248	5463
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5470	19.899	NaN	2223	30	0	699.42	0.033	+			12911	GESGKSTIV	9	44	439.2351165111054	876.4556800890108	2	439.2347717285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GESGKSTIV_	ENSG00000065135|ENST00000369851|GNAI3;ENSG00000087258|ENST00000262493|GNAO1;ENSG00000087460|ENST00000371085|GNAS;ENSG00000114349|ENST00000232461|GNAT1;ENSG00000114353|ENST00000313601|GNAI2;ENSG00000127955|ENST00000649796|GNAI1;ENSG00000141404|ENST00000334049|GNAL;ENSG00000214415|ENST00000398291|GNAT3;ENST00000313949.11_1_20:57415898-57485881:+|nuORF;ENST00000371075.7_3_20:57415898-57485881:+|nuORF;ENST00000371098.6_1_20:57415898-57475007:+|nuORF;ENST00000464960.5_1_20:57463863-57475007:+|nuORF;ENST00000477931.5_1_20:57464155-57485881:+|nuORF;ENST00000480975.5_1_20:57464272-57485881:+|nuORF;ENST00000484504.5_1_20:57464299-57475007:+|nuORF;ENST00000491348.5_1_20:57416812-57475007:+|nuORF;ENST00000493744.5_1_20:57416812-57475007:+|nuORF;GNAL|p.L333*|1|0.17|ENSG00000141404|chr18:11876683-11876683|T/-|frameshift_variant;GNAT1|p.Q90Pfs*16|1|0.34|ENSG00000114349|chr3:50193378-50193379|-/CATCC|frameshift_variant;nc|ENSG00000087258|P09471-2|GNAO1;nc|ENSG00000087460|P63092-2|GNAS;nc|ENSG00000087460|P63092-3|GNAS;nc|ENSG00000087460|P63092-4|GNAS;nc|ENSG00000087460|Q5JWF2-2|GNAS;nc|ENSG00000087460|Q5JWF2|GNAS;nc|ENSG00000114353|P04899-2|GNAI2;nc|ENSG00000114353|P04899-3|GNAI2;nc|ENSG00000114353|P04899-4|GNAI2;nc|ENSG00000114353|P04899-5|GNAI2;nc|ENSG00000134183|P19087|GNAT2;nc|ENSG00000141404|P38405|GNAL	47.657333605630114	0.33044192980041115	3				NaN	NaN	0	NaN	2220	3248	5463
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5482	19.924	NaN	15601	30	0	2112	0.214	+			2621	AQIENSAAVQK	11	81	579.8098161142059	1157.6050792952117	2	579.8096313476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AQIENSAAVQK_	ENSG00000117226|ENST00000370481|GBP3;ENSG00000117228|ENST00000370473|GBP1;ENST00000394662.2_1_1:89887573-89889825:+|nuORF;GBP1|p.K391Sfs*28|1|0.19|ENSG00000117228|chr1:89056212-89056212|T/-|frameshift_variant;GBP3|p.G430Afs*34|1|0.37|ENSG00000117226|chr1:89010977-89010977|C/-|frameshift_variant;nc|ENSG00000117226|Q9H0R5-4|GBP3	206.72814124674278	3.563786490912116E-09	3				NaN	NaN	0	NaN	2229	3251	5481
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5483	19.928	NaN	7477.3	30	0	871.99	0.106	+			5589	AVATKFVNK	9	66	489.2929881518964	976.5714233705928	2	489.2922668457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVATKFVNK_	ENSG00000038382|ENST00000344204|TRIO;ENST00000508717.1_1_5:14498631-14508016:+|nuORF;nc|ENSG00000038382|O75962-2|TRIO;nc|ENSG00000038382|O75962-3|TRIO;nc|ENSG00000038382|O75962-4|TRIO	145.15565482312357	0.00806134135205793	3				NaN	NaN	0	NaN	2230	3251	5481
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5484	19.93	NaN	4509.9	30	0	803.86	0.106	+			39832	STLKSIMKK	9	55	345.8794639706982	1034.6165625122946	3	345.8792419433594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STLKSIMKK_	ENSG00000107104|ENST00000382297|KANK1;ENST00000354485.5_1_9:730997-731267:+|nuORF;ENST00000489369.5_1_9:676972-732786:+|nuORF;nc|ENSG00000107104|Q14678-2|KANK1	54.722347961057174	0.257609425301511	3				NaN	NaN	0	NaN	2231	3251	5481
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5485	19.932	NaN	5000.7	30	0	582.4	0.106				-1	 	0	72	537.7888260712443	1073.5630992092886	2	537.7884521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2232	3251	5481
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5486	19.934	NaN	4041.9	30	0	1048.7	0.106	+			12844	GENVWRCCQ	9	57	547.7289057436484	1093.4432585540967	2	547.72900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GENVWRCCQ_	ENSG00000141750|ENST00000333461|STAC2;nc|ENSG00000141750|Q6ZMT1-2|STAC2	58.78195531508484	0.22376836668196862	3				NaN	NaN	0	NaN	2233	3251	5481
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5487	19.935	NaN	4065.8	30	0	500.25	0.034	+			37766	SLVSEKKSA	9	64	474.7721879586394	NaN	0	474.7802429199219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLVSEKKSA_	ENSG00000122970|ENST00000242591|IFT81	37.81151784470057	0.28666463014928195	3				NaN	NaN	0	NaN	2234	3251	5481
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5488	19.936	NaN	1395.4	30	0	528.39	0.138	+			12088	GAAPPTPPR	9	45	432.2404370659506	862.4663211987012	2	432.24017333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GAAPPTPPR_	ENSG00000119681|ENST00000261978|LTBP2;LTBP2|p.G1123Afs*55|1|0.28|ENSG00000119681|chr14:74509273-74509273|C/-|frameshift_variant;LTBP2|p.H1189Pfs*57|1|0.22|ENSG00000119681|chr14:74508690-74508691|-/G|frameshift_variant;LTBP2|p.V586*|1|0.36|ENSG00000119681|chr14:74549896-74549896|C/-|frameshift_variant	20.94693142431847	0.6074874384046576	3				NaN	NaN	0	NaN	2235	3251	5481
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5497	19.958	NaN	2504.2	30	0	556.41	0.214			+	8491	EASQLSEGL	9	59	467.2299627341705	932.445372535141	2	467.2294006347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EASQLSEGL_	REV__ENSG00000112984|ENST00000394894|KIF20A;REV__nc|ENSG00000112984|O95235-2|KIF20A	37.81151784470057	0.4459294069877048	3				NaN	NaN	0	NaN	2241	3254	5496
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5498	19.961	NaN	2243.9	30	0	252.09	0.106			+	10090	ESKRIVSGAA	10	62	509.28784936054853	NaN	0	509.288330078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ESKRIVSGAA_	REV__ENSG00000167595|ENST00000646935|PROSER3;REV__nc|ENSG00000167595|Q2NL68|PROSER3	41.080066990542036	0.36199559365313844	3				NaN	NaN	0	NaN	2242	3254	5496
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5499	19.963	NaN	2956	30	0	288.61	0.106	+			34618	RVPVEKPVYK	10	65	405.58069287423587	1213.7202492229076	3	405.5804748535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RVPVEKPVYK_	ENSG00000184428|ENST00000329245|TOP1MT;nc|ENSG00000184428|Q969P6-2|TOP1MT	47.227680397652996	0.4825456260682108	3				NaN	NaN	0	NaN	2243	3254	5496
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5500	19.965	NaN	1035.8	30	0	173.56	0.106			+	37715	SLSTPLPCLH	10	51	534.2833862304688	NaN	0	534.2833862304688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLSTPLPCLH_	REV__ENST00000486994.5_1_19:46886892-46893600:+|nuORF;REV__ENST00000487483.6_1_19:46886892-46890886:+|nuORF	27.882242232435846	0.4086243523356342	3				NaN	NaN	0	NaN	2244	3254	5496
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5501	19.967	NaN	644.66	30	0	45.303	0.106	+			42033	SWCEMPRPTL	10	41	610.2820601669499	1218.5495674006997	2	610.2816772460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SWCEMPRPTL_	HERV1_I-int_dup2|chr3:34679996-34686397:+|1.0948245018220069|0.0565463038051543|4.28|448.0|327|3|anti-sense	40.77816245573522	0.5419747034533848	3				NaN	NaN	0	NaN	2245	3254	5496
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5502	19.968	NaN	2590	30	0	727.42	0.033	+			38626	SSGVPTPTK	9	60	437.23768887416975	872.4608248151395	2	437.2376403808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSGVPTPTK_	ENSG00000138101|ENST00000406818|DTNB;nc|ENSG00000138101|O60941-2|DTNB;nc|ENSG00000138101|O60941-3|DTNB;nc|ENSG00000138101|O60941-4|DTNB;nc|ENSG00000138101|O60941-5|DTNB;nc|ENSG00000138101|O60941-6|DTNB;nc|ENSG00000138101|O60941-7|DTNB	64.20726635412375	0.17854274437659667	3				NaN	NaN	0	NaN	2246	3254	5496
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5503	19.969	NaN	1082.3	30	0	195.92	0.141				-1	VIDNGSGMCK	10	43	540.7449199006745	1079.475286868149	2	540.74560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_VIDNGSGMC(Carbamidomethyl (C))K_	ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196604|ENST00000409914|POTEF;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000204434|Q9BYX7|POTEKP;POTEE|p.N792Kfs*34|1|0.2|ENSG00000188219|chr2:131263828-131263829|-/A|frameshift_variant;POTEF|p.R728Gfs*16|3|0.06|ENSG00000196604|chr2:130075290-130075290|G/-|frameshift_variant	42.86426827375447	0.522752283233888	3				NaN	NaN	0	NaN	2247	3254	5496
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5510	19.987	NaN	15589	30	0	6193.4	0.214	+			3941	ATATELTTK	9	67	468.25610187327203	934.4976508133441	2	468.2554931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATATELTTK_	ENSG00000133606|ENST00000255977|MKRN1;ENST00000475010.5_1_7:140155450-140179030:-|nuORF;nc|ENSG00000133606|Q9UHC7-2|MKRN1;nc|ENSG00000133606|Q9UHC7-3|MKRN1;nc|ENSG00000133606|Q9UHC7-4|MKRN1;nc|ENSG00000238222|Q13434|MKRN4P	159.27591364854348	0.004707062175358555	3				NaN	NaN	0	NaN	2251	3257	5509
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5511	19.991	NaN	4716.5	30	0	523.67	0.106	+			27630	MPQGGGQHY	9	61	487.71193087373683	973.4093088142737	2	487.71099853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MPQGGGQHY_	ENSG00000141380|ENST00000415083|SS18;nc|ENSG00000141380|Q15532-2|SS18	106.41520541750704	0.03265588207292361	3				NaN	NaN	0	NaN	2252	3257	5509
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5512	19.993	NaN	1515.9	30	0	184.35	0.106	+			5315	ATVLTSVKK	9	51	473.8010379261036	945.5875229190073	2	473.7999572753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATVLTSVKK_	ENSG00000092201|ENST00000216297|SUPT16H;ENST00000537175.1_1_12:16553955-16554369:-|nuORF;SUPT16H|p.Y764Cfs*2|1|0.36|ENSG00000092201|chr14:21359493-21359494|AT/-|frameshift_variant	29.170058357718403	0.5306379469863586	3				NaN	NaN	0	NaN	2253	3257	5509
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5513	19.995	NaN	1978.4	30	0	448.73	0.106	+			15763	GVSTNISTK	9	50	453.7483375050797	905.4821220769594	2	453.74774169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GVSTNISTK_	ENSG00000110713|ENST00000324932|NUP98;nc|ENSG00000110713|P52948-2|NUP98;nc|ENSG00000110713|P52948-3|NUP98;nc|ENSG00000110713|P52948-4|NUP98;nc|ENSG00000110713|P52948-6|NUP98;nc|ENSG00000110713|P52948|NUP98;NUP98|p.F410Lfs*77|1|0.19|ENSG00000110713|chr11:3753404-3753404|A/-|frameshift_variant;NUP98|p.N1328Tfs*89|2|0.22|ENSG00000110713|chr11:3699159-3699159|T/-|frameshift_variant	51.19269402634007	0.2889735674168909	3				NaN	NaN	0	NaN	2254	3257	5509
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5514	19.996	NaN	6566.7	30	0	2384	0.106			+	27297	MGRRDQRR	8	44	358.8614994324965	1073.5626688976895	3	358.86114501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MGRRDQRR_	REV__ENSG00000011143|ENST00000393119|MKS1;REV__MKS1|p.F377Lfs*53|1|0.3|ENSG00000011143|chr17:58208139-58208139|A/-|frameshift_variant;REV__MKS1|p.P200Lfs*29|1|0.09|ENSG00000011143|chr17:58214304-58214304|G/-|frameshift_variant;REV__MKS1|p.R164S|1|0.48|ENSG00000011143|chr17:58214766-58214766|G/T|missense_variant;REV__nc|ENSG00000011143|Q9NXB0-2|MKS1;REV__nc|ENSG00000011143|Q9NXB0-3|MKS1	18.324413293986947	0.7971860551947066	3				NaN	NaN	0	NaN	2255	3257	5509
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5515	19.998	NaN	4829.1	30	0	1136.5	0.106			+	-1	KMVVKKTSA	9	41	336.53426120958477	NaN	0	336.5343017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_KM(Oxidation (M))VVKKTSA_	REV__CFAP47|p.F1567Vfs*4|1|0.31|ENSG00000165164|chrX:36098829-36098830|-/G|frameshift_variant;REV__CFAP47|p.H2345Afs*15|1|0.09|ENSG00000165164|chrX:36236809-36236810|-/A|frameshift_variant;REV__CFAP47|p.K734Nfs*6|1|0.13|ENSG00000165164|chrX:35971909-35971909|A/-|frameshift_variant;REV__CFAP47|p.P2326Tfs*34|1|0.26|ENSG00000165164|chrX:36236751-36236752|-/A|frameshift_variant;REV__ENSG00000165164|ENST00000378653|CFAP47;REV__nc|ENSG00000165164|Q6ZTR5-1|CFAP47;REV__nc|ENSG00000165164|Q6ZTR5-2|CFAP47;REV__nc|ENSG00000165164|Q6ZTR5-6|CFAP47	26.69291269510374	0.34280015626154364	3				NaN	NaN	0	NaN	2256	3257	5509
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5516	20	NaN	1814.7	30	0	361.33	0.036	+			1969	AIYGTRKFK	9	55	542.3190346124661	1082.6235162917321	2	542.3194580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AIYGTRKFK_	ENSG00000197629|ENST00000361050|MPEG1	56.632244143249146	0.24168844994051353	3				NaN	NaN	0	NaN	2257	3257	5509
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5523	20.016	NaN	4188.7	30	0	567.77	0.214	+			48785	VTYNGVDNNK	10	72	562.273286690894	1122.532020448588	2	562.2732543945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTYNGVDNNK_	ENSG00000122545|ENST00000350320|SEPTIN7;ENST00000425198.1_1_7:35872473-35938044:+|nuORF;ENST00000469999.1_1_7:152065296-152065533:+|nuORF;ENST00000492940.1_1_7:35930257-35938044:+|nuORF;nc|ENSG00000122545|Q16181-2|SEPTIN7	154.0112374973812	0.007783311651969589	3				NaN	NaN	0	NaN	2261	3260	5522
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5524	20.02	NaN	1598	30	0	383.94	0.106				-1	TSTCVLWL	8	50	490.24824578297546	978.4819386327509	2	490.24737548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_TSTC(Carbamidomethyl (C))VLWL_	ENSG00000135973|ENST00000258456|GPR45	54.76467175910256	0.5536104764165384	3				NaN	NaN	0	NaN	2262	3260	5522
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5525	20.022	NaN	1927.4	30	0	349.38	0.106			+	21532	KNSLGLAP	8	39	400.23774572817376	798.4609385231475	2	400.2374267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KNSLGLAP_	REV__ENSG00000134759|ENST00000358232|ELP2;REV__nc|ENSG00000134759|Q6IA86-2|ELP2;REV__nc|ENSG00000134759|Q6IA86-3|ELP2;REV__nc|ENSG00000134759|Q6IA86-4|ELP2;REV__nc|ENSG00000134759|Q6IA86-5|ELP2;REV__nc|ENSG00000134759|Q6IA86-6|ELP2;REV__nc|ENSG00000134759|Q6IA86-7|ELP2	40.5726180659479	0.6527593143185008	3				NaN	NaN	0	NaN	2263	3260	5522
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5526	20.023	NaN	2691	30	0	279.86	0.106	+			35775	SEADSHCL	8	66	459.68430217655225	917.3540514199045	2	460.1867370605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_SEADSHC(Carbamidomethyl (C))L_	ENSG00000198788|ENST00000675028|MUC2;nc|ENSG00000198788|Q02817|MUC2	55.50420428727701	0.5462892107279674	3				NaN	NaN	0	NaN	2264	3260	5522
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5527	20.025	NaN	2084.1	30	0	542.76	0.106	+			13282	GIWPRNADK	9	37	352.8579804236645	1055.5521118711936	3	352.8572998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GIWPRNADK_	ENSG00000214595|ENST00000356458|EML6	30.317721548370564	0.5199124245378496	3				NaN	NaN	0	NaN	2265	3260	5522
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5528	20.027	NaN	2162.4	30	0	994.98	0.037			+	37992	SPKFLHKNL	9	34	361.88227973311734	1082.6250097995521	3	362.2164611816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SPKFLHKNL_	REV__ENSG00000036549|ENST00000370801|ZZZ3;REV__nc|ENSG00000036549|Q8IYH5-2|ZZZ3;REV__nc|ENSG00000036549|Q8IYH5-3|ZZZ3	25.57405402267927	0.5642445186134241	3				NaN	NaN	0	NaN	2266	3260	5522
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5533	20.041	NaN	3235	30	0	608.17	0.214				-1	SICGKSFTK	9	61	514.2657083202511	1026.516863707302	2	514.2655029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SIC(Carbamidomethyl (C))GKSFTK_	ENSG00000127081|ENST00000375495|ZNF484;nc|ENSG00000127081|Q5JVG2-2|ZNF484;nc|ENSG00000127081|Q5JVG2-3|ZNF484	70.8162118820467	0.13725933411854815	3				NaN	NaN	0	NaN	2268	3263	5532
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5534	20.045	NaN	4509.9	30	0	547.64	0.106	+			42003	SVYKEAIQK	9	65	533.3013902652283	1064.5882275972565	2	533.30078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVYKEAIQK_	ENSG00000179104|ENST00000321196|TMTC2;ENST00000551915.5_1_12:83081308-83379891:+|nuORF;TMTC2|p.A737Qfs*4|1|0.25|ENSG00000179104|chr12:83050953-83050953|A/-|frameshift_variant	88.17693792209575	0.07000514020414955	3				NaN	NaN	0	NaN	2269	3263	5532
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5535	20.047	NaN	12961	30	0	6931.7	0.106			+	-1	ATPLPQDMHK	10	43	385.192805770408	1152.556587911424	3	385.1923522949219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_ATPLPQDM(Oxidation (M))HK_	REV__ENSG00000154767|ENST00000285021|XPC;REV__nc|ENSG00000154767|Q01831-2|XPC	33.921630207806714	0.6028135429846169	3				NaN	NaN	0	NaN	2270	3263	5532
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5536	20.049	NaN	3827.2	30	0	749.68	0.106	+			17313	IAERQKGLQ	9	60	521.8041124587511	1041.593671984302	2	521.8040771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IAERQKGLQ_	ENSG00000168297|ENST00000356151|PXK;nc|ENSG00000168297|Q7Z7A4-2|PXK;nc|ENSG00000168297|Q7Z7A4-4|PXK;nc|ENSG00000168297|Q7Z7A4-6|PXK;nc|ENSG00000168297|Q7Z7A4-7|PXK	35.61828744233558	0.47037581924408073	3				NaN	NaN	0	NaN	2271	3263	5532
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5537	20.05	NaN	3483.5	30	0	401.4	0.106	+			42468	TAMNGNLAK	9	65	460.2372770530269	918.4600011728538	2	460.2364807128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TAMNGNLAK_	ENSG00000184675|ENST00000374869|AMER1	87.69643885390035	0.07135982304947239	3				NaN	NaN	0	NaN	2272	3263	5532
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5538	20.052	NaN	1496.1	30	0	302.06	0.106	+			50275	WRNALVAG	8	44	443.74862510267326	885.4826972721465	2	443.74786376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_WRNALVAG_	ENSG00000180549|ENST00000314412|FUT7	21.70233525837049	0.7917639344264583	3				NaN	NaN	0	NaN	2273	3263	5532
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5539	20.054	NaN	1733.7	30	0	150.86	0.036	+			37939	SPEEQAKTY	9	68	526.7486086142612	1051.4826642953224	2	526.7489624023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SPEEQAKTY_	ENSG00000243725|ENST00000371281|TTC4;ENST00000486621.1_1_1:55181548-55183334:+|nuORF;TTC4|p.D84G|1|0.21|ENSG00000243725|chr1:54717513-54717513|A/G|missense_variant	104.0567914643314	0.03506238181059741	3				NaN	NaN	0	NaN	2274	3263	5532
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5543	20.068	NaN	3366.7	30	0	625.66	0.214	+			38712	SSLCRTKE	8	46	462.2343231259856	922.4540933187712	2	462.2339782714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSLCRTKE_	ENST00000312561.8_2_12:32112396-32113780:+|nuORF	71.87747018426188	0.391254423828572	3				NaN	NaN	0	NaN	2275	3266	5542
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5544	20.072	NaN	4988.5	30	0	544	0.106	+			24236	LESLHGPWK	9	74	533.7862405893596	1065.5579282455192	2	533.7861938476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LESLHGPWK_	ENST00000389120.7_1_9:104296173-104297722:+|nuORF	99.37495909608758	0.03983967222258828	3				NaN	NaN	0	NaN	2276	3266	5542
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5545	20.074	NaN	4969	30	0	2538.3	0.106	+			2375	ANGLQKNAKV	10	35	348.2052101201403	1041.593800960621	3	348.2049865722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ANGLQKNAKV_	ENSG00000137766|ENST00000260323|UNC13C;UNC13C|p.D1718Rfs*8|1|0.19|ENSG00000137766|chr15:54500163-54500164|-/A|frameshift_variant;UNC13C|p.F1525Lfs*3|2|0.44|ENSG00000137766|chr15:54333842-54333842|T/-|frameshift_variant;UNC13C|p.F542Sfs*65|1|0.06|ENSG00000137766|chr15:54014523-54014523|T/-|frameshift_variant;UNC13C|p.P2056Qfs*10|1|0.33|ENSG00000137766|chr15:54622384-54622384|C/-|frameshift_variant;UNC13C|p.S349Qfs*15|1|0.17|ENSG00000137766|chr15:54013944-54013944|T/-|frameshift_variant;UNC13C|p.W1592Gfs*7|1|0.85|ENSG00000137766|chr15:54393104-54393104|T/-|frameshift_variant	20.94693142431847	0.7087701759873708	3				NaN	NaN	0	NaN	2277	3266	5542
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5546	20.075	NaN	3978.3	30	0	1006.1	0.106	+			2986	ASFDKAKLK	9	60	504.29846411061	1006.58237528802	2	504.2973327636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASFDKAKLK_	ENSG00000034510|ENST00000233143|TMSB10	70.8162118820467	0.13725933411854815	3				NaN	NaN	0	NaN	2278	3266	5542
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5547	20.077	NaN	3413.2	30	0	567.6	0.106	+			34568	RVLSSIEQK	9	73	530.3121547747148	1058.6097566162296	2	530.3114624023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RVLSSIEQK_	ENSG00000175793|ENST00000339276|SFN;nc|ENSG00000175793|P31947-2|SFN	112.10723106719422	0.02684780151337622	3				NaN	NaN	0	NaN	2279	3266	5542
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5548	20.079	NaN	802.9	30	0	202.35	0.106			+	10054	ESEYVESI	8	33	478.2164001464844	NaN	0	478.2164001464844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ESEYVESI_	REV__ENSG00000140941|ENST00000268607|MAP1LC3B;REV__ENSG00000258102|ENST00000556529|MAP1LC3B2;REV__MAP1LC3B2|p.P94A|1|0.07|ENSG00000258102|chr12:116576222-116576222|C/G|missense_variant	25.450171626174864	1.7418937515398478	3				NaN	NaN	0	NaN	2280	3266	5542
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5549	20.081	NaN	3099.2	30	0	362.66	0.034			+	39786	STKTLLEH	8	53	464.75858255706396	NaN	0	464.7582702636719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STKTLLEH_	REV__ENSG00000128313|ENST00000249044|APOL5	35.61828744233558	1.7418937515398478	3				NaN	NaN	0	NaN	2281	3266	5542
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5558	20.101	NaN	2892.3	30	0	297.67	0.214				-1	 	0	56	465.23340150532044	928.4522500774409	2	464.78216552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2287	3269	5557
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5559	20.104	NaN	6570.5	30	0	985.44	0.106	+			39276	STARHLYLR	9	61	372.88090746593235	1115.620892997997	3	373.21514892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STARHLYLR_	ENSG00000105372|ENST00000598742|RPS19	39.252832667884924	0.4290233611298554	3				NaN	NaN	0	NaN	2288	3269	5557
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5560	20.106	NaN	1283.3	30	0	153.93	0.106	+			50003	WAQKLWES	8	54	524.2665173808364	1046.5184818284727	2	524.2667236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_WAQKLWES_	ENSG00000149506|ENST00000278853|ZP1	45.9519527083369	0.6193794311207887	3				NaN	NaN	0	NaN	2289	3269	5557
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5561	20.108	NaN	1021	30	0	102.98	0.106	+			1956	AIVEVEEALI	10	50	543.307373046875	NaN	0	543.307373046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AIVEVEEALI_	ENSG00000105778|ENST00000318709|AVL9;nc|ENSG00000105778|Q8NBF6-2|AVL9	36.446750945000026	0.3805027428805705	3				NaN	NaN	0	NaN	2290	3269	5557
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5562	20.11	NaN	1251	30	0	121.98	0.106			+	18669	ISYEILGNL	9	47	511.2824192370507	1020.5502855409014	2	511.2808837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ISYEILGNL_	REV__DCHS2|p.C2517Sfs*5|1|0.13|ENSG00000197410|chr4:154235737-154235737|C/-|frameshift_variant;REV__ENSG00000197410|ENST00000357232|DCHS2	29.14955571784316	0.5308295550522326	3				NaN	NaN	0	NaN	2291	3269	5557
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5563	20.112	NaN	1782.2	30	0	679.33	0.036				-1	MSRRKQGNP	9	52	558.2895574061819	NaN	0	558.2893676757812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))MSRRKQGNP_	BCL11B|p.P420Rfs*55|1|0.23|ENSG00000127152|chr14:99175577-99175577|G/-|frameshift_variant;ENSG00000127152|ENST00000357195|BCL11B;nc|ENSG00000127152|Q9C0K0-2|BCL11B	32.81241826257853	0.3119040447479903	3				NaN	NaN	0	NaN	2292	3269	5557
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5564	20.112	NaN	9354.4	30	0	892.65	0.14			+	29830	PKTDVKSQ	8	62	451.75134466301574	901.4881363928315	2	451.7508544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PKTDVKSQ_	REV__ENSG00000087303|ENST00000216286|NID2;REV__nc|ENSG00000087303|Q14112-2|NID2;REV__NID2|p.K1297Nfs*26|1|0.42|ENSG00000087303|chr14:52006650-52006650|T/-|frameshift_variant	54.776311868738084	0.5534952410049249	3				NaN	NaN	0	NaN	2293	3269	5557
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5573	20.134	NaN	29631	30	0	5262.1	0.214			+	16866	HPGGWSDF	8	65	451.69353072497535	901.3725085167507	2	451.6929016113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HPGGWSDF_	REV__ENSG00000149328|ENST00000535456|GLB1L2;REV__ENST00000529077.5_1_11:134236970-134242406:+|nuORF	54.76467175910256	0.5536104764165384	3				NaN	NaN	0	NaN	2299	3272	5572
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5574	20.138	NaN	5793.8	30	0	1172.5	0.106				-1	 	0	61	475.27741319638153	948.5402734595631	2	475.27655029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2300	3272	5572
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5575	20.14	NaN	12892	30	0	3473.7	0.106	+			12683	GEKGERIHL	9	65	346.8614117771648	1037.5624059316945	3	346.8611145019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEKGERIHL_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	56.43379154798735	0.2433427591689151	3				NaN	NaN	0	NaN	2301	3272	5572
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5576	20.141	NaN	6261.9	30	0	1038.5	0.106	+			12684	GEKGERIHL	9	66	519.7884397237854	1037.5623265143706	2	519.7879028320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEKGERIHL_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	45.908116695636124	0.35095954387056183	3				NaN	NaN	0	NaN	2302	3272	5572
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5577	20.143	NaN	13217	30	0	6828.6	0.106	+			19376	KALSALFIWP	10	52	382.5622301724535	1144.6648611175606	3	382.8961486816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KALSALFIWP_	ENST00000428239.5_1_1:91973461-91973863:+|nuORF	24.519189625965996	0.6795976720565101	3				NaN	NaN	0	NaN	2303	3272	5572
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5578	20.145	NaN	3272.4	30	0	1906.5	0.106	+			30921	QELEKQRQL	9	48	586.3257957846349	1170.6370386360697	2	586.32568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QELEKQRQL_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	78.26377905018397	0.10505600812668463	3				NaN	NaN	0	NaN	2304	3272	5572
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5579	20.147	NaN	4941.2	30	0	878.78	0.036	+			15454	GTYVKPLSNK	10	70	553.8142578493793	1105.6139627655584	2	553.8145751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GTYVKPLSNK_	ACOX1|p.N501Tfs*6|1|0.47|ENSG00000161533|chr17:75949577-75949577|T/-|frameshift_variant;ENSG00000161533|ENST00000293217|ACOX1;ENST00000589744.1_1_17:73949530-73951667:-|nuORF;nc|ENSG00000161533|Q15067-3|ACOX1;nc|ENSG00000161533|Q15067|ACOX1	114.8945686534367	0.03454040281423369	3				NaN	NaN	0	NaN	2305	3272	5572
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5589	20.168	NaN	12308	30	0	3910.2	0.214	+			2600	AQGNVYHLK	9	59	343.8542602494743	1028.540951348623	3	343.8541564941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AQGNVYHLK_	ENSG00000143013|ENST00000370544|LMO4	42.86426827375447	0.38666266728046506	3				NaN	NaN	0	NaN	2312	3275	5588
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5590	20.172	NaN	3680.5	30	0	559.44	0.106	+			649	AEAEKKVQL	9	61	508.29275584577476	1014.5709587583495	2	508.2922058105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEAEKKVQL_	ENSG00000144747|ENST00000398559|TMF1;nc|ENSG00000144747|P82094-2|TMF1;TMF1|p.R506I|1|0.23|ENSG00000144747|chr3:69043811-69043811|C/A|missense_variant	77.31757898189308	0.1091473830098891	3				NaN	NaN	0	NaN	2313	3275	5588
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5591	20.174	NaN	3238	30	0	761.41	0.106			+	47538	VQTVAAEGV	9	56	437.23768887416975	872.4608248151395	2	437.23748779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VQTVAAEGV_	REV__nc|ENSG00000124831|Q32MZ4-2|LRRFIP1;REV__nc|ENSG00000124831|Q32MZ4-3|LRRFIP1;REV__nc|ENSG00000124831|Q32MZ4|LRRFIP1	45.97224482568171	0.3502073465782774	3				NaN	NaN	0	NaN	2314	3275	5588
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5592	20.176	NaN	1632.7	30	0	364.99	0.106			+	11189	FHCTLTEPG	9	53	531.2378404224987	1060.4611279117973	2	531.237548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_FHC(Carbamidomethyl (C))TLTEPG_	REV__ENST00000361906.7_1_22:38617127-38617379:-|nuORF	88.64286706044652	0.06869153472052109	3				NaN	NaN	0	NaN	2315	3275	5588
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5593	20.177	NaN	2609.2	30	0	316.38	0.106	+			3882	ATAQAVAPPR	10	54	491.2773467546359	NaN	0	491.27740478515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATAQAVAPPR_	ENST00000609438.1_1_4:90171359-90228902:-|nuORF	49.536043120802724	0.30853568297719935	3				NaN	NaN	0	NaN	2316	3275	5588
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5594	20.179	NaN	2794.8	30	0	1256.8	0.037				-1	EEVKDRCTL	9	53	575.2822753710133	1148.5499978088264	2	575.2824096679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_EEVKDRC(Carbamidomethyl (C))TL_	ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65622809-65623088:-|nuORF	23.52269567125451	0.5834155526130771	3				NaN	NaN	0	NaN	2317	3275	5588
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5595	20.18	NaN	1387.8	30	0	170.08	0.14			+	19669	KDMFDSFH	8	57	513.7190364615893	NaN	0	513.7188720703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KDMFDSFH_	REV__ENSG00000095464|ENST00000371447|PDE6C	33.51558372728122	1.7418937515398478	3				NaN	NaN	0	NaN	2318	3275	5588
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5603	20.201	NaN	5223.8	30	0	644.26	0.214	+			39793	STLAVTSQK	9	61	467.76417146180415	933.5137899904083	2	467.7633361816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STLAVTSQK_	ENSG00000132549|ENST00000357162|VPS13B;nc|ENSG00000132549|Q7Z7G8-3|VPS13B;nc|ENSG00000132549|Q7Z7G8-6|VPS13B;nc|ENSG00000132549|Q7Z7G8|VPS13B;VPS13B|p.I1913*|1|0.3|ENSG00000132549|chr8:99642246-99642246|A/-|frameshift_variant;VPS13B|p.M3156Ifs*2|1|0.07|ENSG00000132549|chr8:99832427-99832428|-/TA|frameshift_variant;VPS13B|p.S3988Lfs*4|1|0.55|ENSG00000132549|chr8:99875552-99875553|-/C|frameshift_variant;VPS13B|p.S3988Pfs*25|1|0.11|ENSG00000132549|chr8:99875553-99875553|C/-|frameshift_variant	70.8162118820467	0.13725933411854815	3				NaN	NaN	0	NaN	2323	3278	5602
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5604	20.205	NaN	1106.5	30	0	79.952	0.106	+			38656	SSINEARINAK	11	56	601.8284630221622	1201.6423731111242	2	601.8278198242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSINEARINAK_	ENSG00000150593|ENST00000280154|PDCD4;nc|ENSG00000150593|Q53EL6-2|PDCD4;PDCD4|p.N66Rfs*26|1|0.07|ENSG00000150593|chr10:110881385-110881386|-/GAGAG|frameshift_variant	65.15724298150197	0.2774196309614691	3				NaN	NaN	0	NaN	2324	3278	5602
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5605	20.206	NaN	2332.6	30	0	511.58	0.106				-1	VVREMTEGY	9	58	550.2587122912074	1098.5028716492147	2	550.2590942382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_VVREM(Oxidation (M))TEGY_	ENSG00000111602|ENST00000553532|TIMELESS;ENST00000557589.1_1_12:56815505-56817595:-|nuORF;nc|ENSG00000111602|Q9UNS1-2|TIMELESS	38.80614096846853	0.43426287593479557	3				NaN	NaN	0	NaN	2325	3278	5602
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5606	20.208	NaN	1437.7	30	0	228.08	0.106	+			31246	QHHAQAQY	8	50	491.72815879175874	981.4417646503175	2	491.7277526855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QHHAQAQY_	NID2|p.R945H|1|0.27|ENSG00000087303|chr14:52019255-52019255|C/T|missense_variant	26.79610172149135	0.7524337208463756	3				NaN	NaN	0	NaN	2326	3278	5602
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5607	20.21	NaN	1039.3	30	0	80.879	0.036	+			35568	SAYAFSHQR	9	47	533.7572021484375	NaN	0	533.7572021484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SAYAFSHQR_	ENSG00000081923|ENST00000648908|ATP8B1	36.31764250033197	0.294206896222586	3				NaN	NaN	0	NaN	2327	3278	5602
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5613	20.226	NaN	3115.6	30	0	792.46	0.214			+	35765	SDYPTDSLGK	10	63	541.7523748915838	1081.4901968499676	2	541.7525024414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SDYPTDSLGK_	REV__ENSG00000185811|ENST00000331340|IKZF1;REV__nc|ENSG00000185811|Q13422-2|IKZF1;REV__nc|ENSG00000185811|Q13422-3|IKZF1;REV__nc|ENSG00000185811|Q13422-4|IKZF1;REV__nc|ENSG00000185811|Q13422-5|IKZF1;REV__nc|ENSG00000185811|Q13422-6|IKZF1;REV__nc|ENSG00000185811|Q13422-7|IKZF1	47.657333605630114	0.47858658696240314	3				NaN	NaN	0	NaN	2330	3281	5612
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5614	20.23	NaN	2600.3	30	0	337.13	0.106	+			39794	STLAVTSQK	9	56	467.76417146180415	933.5137899904083	2	467.7640686035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STLAVTSQK_	ENSG00000132549|ENST00000357162|VPS13B;nc|ENSG00000132549|Q7Z7G8-3|VPS13B;nc|ENSG00000132549|Q7Z7G8-6|VPS13B;nc|ENSG00000132549|Q7Z7G8|VPS13B;VPS13B|p.I1913*|1|0.3|ENSG00000132549|chr8:99642246-99642246|A/-|frameshift_variant;VPS13B|p.M3156Ifs*2|1|0.07|ENSG00000132549|chr8:99832427-99832428|-/TA|frameshift_variant;VPS13B|p.S3988Lfs*4|1|0.55|ENSG00000132549|chr8:99875552-99875553|-/C|frameshift_variant;VPS13B|p.S3988Pfs*25|1|0.11|ENSG00000132549|chr8:99875553-99875553|C/-|frameshift_variant	46.45678178249821	0.34452392205506005	3				NaN	NaN	0	NaN	2331	3281	5612
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5615	20.232	NaN	2906.1	30	0	630.37	0.106	+			29764	PHYHSFDG	8	61	480.2042586038891	958.3939642745783	2	480.20379638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PHYHSFDG_	ENSG00000275395|ENST00000616721|FCGBP;ENSG00000275395|ENST00000616721|FCGBP;FCGBP-ACSS2|1|fusion;FCGBP-ACSS2|1|fusion;nc|ENSG00000275395|Q9Y6R7|FCGBP;nc|ENSG00000275395|Q9Y6R7|FCGBP;nc|ENSG00000275395|Q9Y6R7|FCGBP	50.0245360154114	0.5941082100236891	3				NaN	NaN	0	NaN	2332	3281	5612
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5616	20.233	NaN	2370.9	30	0	356.29	0.106	+			180	AALAKAIEK	9	54	457.78747888335533	913.5604048335107	2	457.7873229980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AALAKAIEK_	ENSG00000108946|ENST00000589228|PRKAR1A;nc|ENSG00000108946|P10644-2|PRKAR1A	72.87924865735499	0.12833875048249987	3				NaN	NaN	0	NaN	2333	3281	5612
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5617	20.235	NaN	2346.7	30	0	754.96	0.106				-1	 	0	45	364.73850236233415	727.4624517914683	2	364.738037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2334	3281	5612
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5618	20.237	NaN	1397.8	30	0	250.5	0.106			+	-1	GCGENGCCGCC	11	41	392.76969030284874	NaN	0	392.7697448730469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	3 Carbamidomethyl (C)	_GC(Carbamidomethyl (C))GENGC(Carbamidomethyl (C))CGCC(Carbamidomethyl (C))_	REV__ENSG00000169903|ENST00000305354|TM4SF4	6.659615375131196	0.456735970842152	3				NaN	NaN	0	NaN	2335	3281	5612
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5619	20.239	NaN	939.27	30	0	69.706	0.032				-1	GSMIGTST	8	32	385.1746826171875	NaN	0	385.1746826171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_GSM(Oxidation (M))IGTST_	ENSG00000132182|ENST00000254508|NUP210	25.450171626174864	1.7418937515398478	3				NaN	NaN	0	NaN	2336	3281	5612
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5624	20.253	NaN	1113.9	30	0	111.78	0.144	+			34361	RTQIPMSEK	9	47	545.2903302165511	1088.566107499902	2	545.291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTQIPMSEK_	ENSG00000169435|ENST00000307439|RASSF6;nc|ENSG00000169435|Q6ZTQ3-3|RASSF6;nc|ENSG00000169435|Q6ZTQ3-4|RASSF6;nc|ENSG00000169435|Q6ZTQ3|RASSF6;RASSF6|p.K253Nfs*25|1|0.16|ENSG00000169435|chr4:73582195-73582195|T/-|frameshift_variant	75.65223720490533	0.11634833104049533	3				NaN	NaN	0	NaN	2338	3284	5623
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5630	20.271	NaN	4342.6	30	0	630.75	0.214				-1	 	0	61	537.7888260712443	1073.5630992092886	2	537.788818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2341	3287	5629
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5631	20.275	NaN	2708.9	30	0	683.51	0.106			+	13755	GQDTEESSEI	10	54	547.7284976977814	1093.4424424623628	2	547.7296752929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GQDTEESSEI_	REV__ENSG00000105426|ENST00000262963|PTPRS;REV__ENST00000588552.5_1_19:5159112-5286160:-|nuORF;REV__nc|ENSG00000105426|Q13332-2|PTPRS;REV__nc|ENSG00000105426|Q13332-3|PTPRS;REV__nc|ENSG00000105426|Q13332-4|PTPRS;REV__nc|ENSG00000105426|Q13332-5|PTPRS;REV__nc|ENSG00000105426|Q13332-6|PTPRS;REV__nc|ENSG00000105426|Q13332-7|PTPRS;REV__PTPRS|p.P676Rfs*134|2|0.2|ENSG00000105426|chr19:5231438-5231438|G/-|frameshift_variant;REV__PTPRS|p.S414Afs*30|3|0.23|ENSG00000105426|chr19:5244238-5244238|C/-|frameshift_variant	39.252832667884924	0.5560298534376815	3				NaN	NaN	0	NaN	2342	3287	5629
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5632	20.276	NaN	3039.6	30	0	279.07	0.106	+			1073	AEKYAKESL	9	63	519.77806510672	1037.5415772802398	2	519.7780151367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEKYAKESL_	ENSG00000100567|ENST00000216455|PSMA3;ENST00000557290.1_1_14:58737043-58738610:+|nuORF;nc|ENSG00000100567|P25788-2|PSMA3	101.45984612302182	0.0377122763612125	3				NaN	NaN	0	NaN	2343	3287	5629
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5633	20.278	NaN	3754.9	30	0	648.33	0.106			+	42525	TAQKFRALL	9	64	524.3195968427668	1046.6246407523336	2	524.3192749023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TAQKFRALL_	REV__ENST00000370082.1_1_20:62201547-62204491:-|nuORF;REV__nc|ENSG00000130589|Q9BYK8|HELZ2	60.11826168202944	0.21262886028301267	3				NaN	NaN	0	NaN	2344	3287	5629
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5634	20.28	NaN	2847.1	30	0	573.73	0.106	+			8272	EAHILRVLP	9	38	349.88187751448424	1046.6238031436528	3	349.8818054199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EAHILRVLP_	ENG|p.G400Vfs*21|1|0.34|ENSG00000106991|chr9:127819973-127819973|C/-|frameshift_variant;ENG|p.N286Tfs*73|1|0.3|ENSG00000106991|chr9:127824934-127824934|T/-|frameshift_variant;ENG|p.Y258Lfs*76|1|0.4|ENSG00000106991|chr9:127825275-127825276|-/G|frameshift_variant;ENSG00000106991|ENST00000373203|ENG;nc|ENSG00000106991|P17813-2|ENG	26.69291269510374	0.5537881896960711	3				NaN	NaN	0	NaN	2345	3287	5629
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5635	20.282	NaN	2175.3	30	0	393.47	0.106			+	30252	PTAAAAPAAAA	11	59	441.7378909875581	881.4612290419162	2	441.7371520996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PTAAAAPAAAA_	REV__ENST00000423059.8_2_7:11676563-11871669:-|nuORF	53.351449002276354	0.38280258784255455	3				NaN	NaN	0	NaN	2346	3287	5629
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5636	20.284	NaN	1310.2	30	0	220.13	0.035	+			10886	FCHQHGLF	8	51	494.7270812988281	NaN	0	494.7270812988281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FCHQHGLF_	ENSG00000186230|ENST00000334181|ZNF749;ZNF749|p.T217Nfs*3|1|0.5|ENSG00000186230|chr19:57443791-57443792|-/A|frameshift_variant	39.021493756699265	1.7418937515398478	3				NaN	NaN	0	NaN	2347	3287	5629
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5648	20.309	NaN	17753	30	0	2286.3	0.214	+			975	AEKAYHEQL	9	94	544.7724385116107	1087.5303240900214	2	544.7734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEKAYHEQL_	ENSG00000075886|ENST00000321253|TUBA3D;ENSG00000123416|ENST00000336023|TUBA1B;ENSG00000127824|ENST00000248437|TUBA4A;ENSG00000152086|ENST00000312988|TUBA3E;ENSG00000167552|ENST00000301071|TUBA1A;ENSG00000167553|ENST00000301072|TUBA1C;ENSG00000183785|ENST00000330423|TUBA8;ENSG00000198033|ENST00000400113|TUBA3C;ENST00000437364.2_1_1:47358067-47358181:+|nuORF;ENST00000530835.1_1_11:90015825-90016947:+|nuORF;nc|ENSG00000123416|P68363-2|TUBA1B;nc|ENSG00000127824|P68366-2|TUBA4A;nc|ENSG00000167552|Q71U36-2|TUBA1A;nc|ENSG00000183785|Q9NY65-2|TUBA8;nc|ENSG00000198033|P0DPH7-2|TUBA3C;TUBA1A|p.I276V|1|0.05|ENSG00000167552|chr12:49185540-49185540|T/C|missense_variant;TUBA3C|p.T361Rfs*18|1|0.17|ENSG00000198033|chr13:19174136-19174136|G/-|frameshift_variant;TUBA3D|p.G366Efs*13|1|0.17|ENSG00000075886|chr2:131482588-131482588|G/-|frameshift_variant;TUBA3D|p.V328Pfs*54|1|0.45|ENSG00000075886|chr2:131480665-131480666|-/CCCAAAGA|frameshift_variant	148.6902309647307	0.00717441509122429	3				NaN	NaN	0	NaN	2356	3290	5647
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5649	20.313	NaN	1951.2	30	0	590.16	0.106	+			5130	ATSSVSALK	9	47	432.24497537165905	NaN	0	432.2453918457031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATSSVSALK_	ENSG00000177084|ENST00000320574|POLE;ENST00000539357.1_1_12:133257669-133263919:-|nuORF;POLE|p.A2030Pfs*18|1|0.14|ENSG00000177084|chr12:132632712-132632712|C/-|frameshift_variant;POLE|p.E396Sfs*16|1|0.1|ENSG00000177084|chr12:132675438-132675438|C/-|frameshift_variant;POLE|p.K1170Nfs*49|1|0.15|ENSG00000177084|chr12:132657208-132657208|T/-|frameshift_variant;POLE|p.K325Sfs*19|1|0.27|ENSG00000177084|chr12:132676142-132676142|G/-|frameshift_variant	35.15202426646627	0.3000918603816441	3				NaN	NaN	0	NaN	2357	3290	5647
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5650	20.315	NaN	3675.3	30	0	710.08	0.106				-1	AVCIQSTH	8	59	458.2212444707813	NaN	0	458.22149658203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_AVC(Carbamidomethyl (C))IQSTH_	ENST00000466032.1_1_2:86754330-86756450:-|nuORF	60.29395666154354	1.7418937515398478	3				NaN	NaN	0	NaN	2358	3290	5647
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5651	20.316	NaN	2289.5	30	0	195.44	0.106			+	41961	SVVWVLVVA	9	55	486.2986039697084	970.5826550062168	2	486.2982177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVVWVLVVA_	REV__ENSG00000188778|ENST00000345060|ADRB3	47.657333605630114	0.33044192980041115	3				NaN	NaN	0	NaN	2359	3290	5647
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5652	20.318	NaN	6192.6	30	0	1294.5	0.106	+			48986	VVGKPIEVQK	10	71	548.8402858817682	1095.6660188303363	2	548.8405151367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVGKPIEVQK_	ENSG00000166391|ENST00000198801|MOGAT2;nc|ENSG00000166391|Q3SYC2-2|MOGAT2	95.4829727501206	0.09968275784893506	3				NaN	NaN	0	NaN	2360	3290	5647
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5653	20.32	NaN	6008.2	30	0	1503.7	0.106	+			27141	MATPARAP	8	67	415.7135701044092	829.4125872756184	2	415.71343994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_M(Oxidation (M))ATPARAP_	ENST00000299638.7_2_15:57998859-58000941:+|nuORF;ENST00000380557.4_2_15:57998925-58001412:+|nuORF;ENST00000567643.1_1_15:57998925-57999700:+|nuORF;nc|ENSG00000255529|Q6EEV4-2|POLR2M;nc|ENSG00000255529|Q6EEV4|POLR2M	54.76467175910256	0.5536104764165384	3				NaN	NaN	0	NaN	2361	3290	5647
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5654	20.322	NaN	3715.5	30	0	1111.1	0.035			+	15830	GWCVCRADA	9	53	490.7074643240141	979.4003757148282	2	490.7073669433594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GWCVCRADA_	REV__ENST00000527563.1_1_1:113247606-113247669:-|nuORF	40.5726180659479	0.4135428067754104	3				NaN	NaN	0	NaN	2362	3290	5647
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5660	20.336	NaN	34458	30	0	8144.5	0.214			+	6804	CGGGRRQGGAL	11	63	363.51748733758836	1087.530632612965	3	363.5171203613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_C(Carbamidomethyl (C))GGGRRQGGAL_	REV__ENST00000395824.5_1_17:16471140-16472440:-|nuORF;REV__ENST00000461555.1_1_17:16472062-16472293:-|nuORF	42.33807565288922	0.5259510355945483	3				NaN	NaN	0	NaN	2365	3293	5659
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5661	20.34	NaN	12234	30	0	5986.9	0.106	+			48987	VVGKPIEVQK	10	60	366.2292981319795	1095.6660649961384	3	366.22900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVGKPIEVQK_	ENSG00000166391|ENST00000198801|MOGAT2;nc|ENSG00000166391|Q3SYC2-2|MOGAT2	38.753607047826485	0.5606299674732264	3				NaN	NaN	0	NaN	2366	3293	5659
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5662	20.342	NaN	2339.4	30	0	415.03	0.106	+			25881	LSGAASWEH	9	57	479.2252053480391	956.4358577628782	2	479.2245788574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSGAASWEH_	ENSG00000169718|ENST00000306796|DUS1L;ENST00000578264.1_1_17:80019305-80022125:-|nuORF;ENST00000578846.5_1_17:80019305-80021015:-|nuORF	60.97194046774394	0.20551255781574032	3				NaN	NaN	0	NaN	2367	3293	5659
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5663	20.344	NaN	2792.9	30	0	630.94	0.106			+	18162	ILQPPQSPK	9	34	336.53450849413684	1006.5816960826105	3	336.5342102050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ILQPPQSPK_	REV__TOX|p.T345P|1|0.34|ENSG00000198846|chr8:58815697-58815697|T/G|missense_variant	26.69291269510374	0.5537881896960711	3				NaN	NaN	0	NaN	2368	3293	5659
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5664	20.345	NaN	1413.3	30	0	729.6	0.106			+	5617	AVCLLHFPT	9	30	334.1796569824219	NaN	0	334.1796569824219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVCLLHFPT_	REV__SPHKAP|p.P530Qfs*32|1|0.43|ENSG00000153820|chr2:228019265-228019265|G/-|frameshift_variant	27.882242232435846	0.3367954786602879	3				NaN	NaN	0	NaN	2369	3293	5659
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5665	20.347	NaN	1816.8	30	0	323.21	0.106	+			51405	YTPVAAGLL	9	49	452.7590996041745	903.503646275149	2	452.75811767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YTPVAAGLL_	ENSG00000008710|ENST00000262304|PKD1;nc|ENSG00000008710|P98161-2|PKD1;nc|ENSG00000008710|P98161-3|PKD1	52.29916861842294	0.2778091507991977	3				NaN	NaN	0	NaN	2370	3293	5659
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5666	20.349	NaN	1658	30	0	282.18	0.034	+			22	AAAGPSCALK	10	50	473.24479881012815	944.4750446870563	2	473.24462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_AAAGPSC(Carbamidomethyl (C))ALK_	ENSG00000125968|ENST00000376112|ID1;ID1|p.G120Afs*20|1|0.38|ENSG00000125968|chr20:31605737-31605737|C/-|frameshift_variant;nc|ENSG00000125968|P41134-2|ID1	42.86426827375447	0.522752283233888	3				NaN	NaN	0	NaN	2371	3293	5659
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5681	20.38	NaN	5312.9	30	0	1265.6	0.214	+			14322	GSYSKAFAR	9	62	493.7567799333003	985.4990069334007	2	493.7560729980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSYSKAFAR_	ENSG00000005175|ENST00000005386|RPAP3;nc|ENSG00000005175|Q9H6T3-2|RPAP3;nc|ENSG00000005175|Q9H6T3-3|RPAP3	104.42354056486148	0.0346881550498418	3				NaN	NaN	0	NaN	2383	3296	5680
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5682	20.383	NaN	6628.6	30	0	2298.2	0.106			+	35370	SAPRVGPVRWA	11	40	399.22790733626766	1194.661892609003	3	399.2273254394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAPRVGPVRWA_	REV__nc|ENSG00000177234|Q8N1V8|LINC01561	28.5767321226876	0.690044582712672	3				NaN	NaN	0	NaN	2384	3296	5680
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5683	20.385	NaN	6609.5	30	0	5797.1	0.106				-1	VTVPSTREVM	10	35	378.86522546294304	1133.573846989029	3	378.8648376464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_VTVPSTREVM(Oxidation (M))_	ENSG00000261150|ENST00000615648|EPPK1;EPPK1|p.G2015Vfs*36|2|0.33|ENSG00000261150|chr8:143867210-143867210|C/-|frameshift_variant	20.83715455343099	0.7096666582730032	3				NaN	NaN	0	NaN	2385	3296	5680
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5684	20.387	NaN	3732.5	30	0	497.98	0.106	+			14755	GTKGPSNVFK	10	61	517.7854886868346	1033.556424440469	2	517.7852783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTKGPSNVFK_	ENSG00000039123|ENST00000230640|MTREX	62.166158670854095	0.3461392669251714	3				NaN	NaN	0	NaN	2386	3296	5680
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5685	20.389	NaN	1948.1	30	0	378.98	0.106	+			8974	EFLNRVDEI	9	54	567.7940914191491	1133.5736299050982	2	567.7936401367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EFLNRVDEI_	tr|U7T4Z1|U7T4Z1_FUSNUChaperoneproteinClpBOS=FusobacteriumnucleatumCTI-5OX=1316586GN=clpBPE=3SV=1	26.69291269510374	0.5537881896960711	3				NaN	NaN	0	NaN	2387	3296	5680
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5686	20.391	NaN	1963.9	30	0	367.05	0.034	+			24415	LGAPGPIGLSG	11	42	469.76922232628453	937.5238917193691	2	469.76849365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LGAPGPIGLSG_	COL4A4|p.G1230Vfs*58|2|0.28|ENSG00000081052|chr2:227032170-227032170|C/-|frameshift_variant;COL4A4|p.G503Wfs*12|1|0.38|ENSG00000081052|chr2:227088770-227088771|-/G|frameshift_variant;COL4A4|p.P502Lfs*151|1|0.38|ENSG00000081052|chr2:227088771-227088771|G/-|frameshift_variant;COL4A4|p.P630Qfs*23|1|0.16|ENSG00000081052|chr2:227077997-227077997|C/-|frameshift_variant;ENSG00000081052|ENST00000396625|COL4A4	34.172542307311794	0.6313490974540716	3				NaN	NaN	0	NaN	2388	3296	5680
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5687	20.391	NaN	1333.5	30	0	283.35	0.141	+			9838	EPNYGAEIRG	10	49	553.267611400075	1104.52066986695	2	553.267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EPNYGAEIRG_	ENSG00000038427|ENST00000265077|VCAN;ENST00000513016.5_1_5:82832752-82876250:+|nuORF;nc|ENSG00000038427|P13611-2|VCAN;nc|ENSG00000038427|P13611-5|VCAN;VCAN|p.E2431Rfs*10|1|0.16|ENSG00000038427|chr5:83540290-83540291|-/G|frameshift_variant	30.317721548370564	0.6322445173429027	3				NaN	NaN	0	NaN	2389	3296	5680
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5699	20.418	NaN	4167.8	30	0	922.8	0.214			+	13247	GILVIDHIQ	9	59	504.29846411061	1006.58237528802	2	504.2967529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GILVIDHIQ_	REV__ENST00000485881.1_1_3:137599977-137600205:+|nuORF	38.80614096846853	0.43426287593479557	3				NaN	NaN	0	NaN	2398	3299	5698
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5700	20.422	NaN	5149	30	0	2119.3	0.106	+			36418	SETTAAHSL	9	58	458.7225781609929	915.4306033887858	2	458.7217102050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SETTAAHSL_	ENSG00000119408|ENST00000320246|NEK6;nc|ENSG00000119408|Q9HC98-2|NEK6;nc|ENSG00000119408|Q9HC98-3|NEK6;nc|ENSG00000119408|Q9HC98-4|NEK6	74.25504064058377	0.12238981753128622	3				NaN	NaN	0	NaN	2399	3299	5698
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5701	20.424	NaN	3882.1	30	0	1081.7	0.106	+			14323	GSYSKAFAR	9	40	329.5068804107337	985.4988118324011	3	329.506591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GSYSKAFAR_	ENSG00000005175|ENST00000005386|RPAP3;nc|ENSG00000005175|Q9H6T3-2|RPAP3;nc|ENSG00000005175|Q9H6T3-3|RPAP3	37.81151784470057	0.4459294069877048	3				NaN	NaN	0	NaN	2400	3299	5698
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5702	20.426	NaN	2860.6	30	0	593.72	0.106			+	9047	EGGADTGRL	9	51	438.21463225076906	874.4147115683381	2	438.2140808105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EGGADTGRL_	REV__ENST00000447595.1_1_1:179054682-179054961:+|nuORF	60.11826168202944	0.21262886028301267	3				NaN	NaN	0	NaN	2401	3299	5698
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5703	20.428	NaN	1902	30	0	190.34	0.106	+			46229	VEAQKAQQL	9	57	507.7823669980428	1013.5501810628856	2	507.78240966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VEAQKAQQL_	ENSG00000088325|ENST00000300403|TPX2;nc|ENSG00000088325|Q9ULW0-2|TPX2	80.45461616416974	0.09558281504443908	3				NaN	NaN	0	NaN	2402	3299	5698
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5704	20.429	NaN	1769.6	30	0	318.41	0.036	+			32866	RDEAVNKIR	9	61	550.8123501767593	1099.6101474203185	2	550.8124389648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RDEAVNKIR_	ENSG00000138035|ENST00000447944|PNPT1;ENST00000260604.8_1_2:55870335-55906871:-|nuORF;ENST00000450418.1_1_3:4024502-4025426:-|nuORF	53.08895987439943	0.27122541748218487	3				NaN	NaN	0	NaN	2403	3299	5698
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5705	20.43	NaN	989.16	30	0	118.25	0.14	+			16365	HENDVKTAL	9	43	513.7644978181143	1025.5144427030284	2	513.7645874023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HENDVKTAL_	ENSG00000165533|ENST00000380656|TTC8;nc|ENSG00000165533|Q8TAM2-3|TTC8;TTC8|p.K269Rfs*38|1|0.08|ENSG00000165533|chr14:88857236-88857237|-/GGATGAATAG|frameshift_variant	35.15202426646627	0.4747332964206883	3				NaN	NaN	0	NaN	2404	3299	5698
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5715	20.454	NaN	5742.5	30	0	771.71	0.214				-1	QTLDVAMQL	9	65	517.7607912371426	1033.507029541085	2	517.7599487304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_QTLDVAM(Oxidation (M))QL_	ENSG00000149782|ENST00000279230|PLCB3;nc|ENSG00000149782|Q01970-2|PLCB3;PLCB3|p.R918Afs*95|5|0.32|ENSG00000149782|chr11:64265045-64265045|C/-|frameshift_variant	64.20726635412375	0.17854274437659667	3				NaN	NaN	0	NaN	2411	3302	5714
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5716	20.457	NaN	1879.4	30	0	260.44	0.106	+			13374	GLAQPVGINT	10	56	485.2718956468497	968.5292383604994	2	485.2715148925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GLAQPVGINT_	ENSG00000108688|ENST00000378569|CCL7	44.377184641726394	0.5088115166961078	3				NaN	NaN	0	NaN	2412	3302	5714
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5717	20.459	NaN	1538.4	30	0	711.98	0.106	+			36990	SIPEKNRPL	9	42	527.3063983466906	1052.598243760181	2	527.3068237304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SIPEKNRPL_	ENSG00000178700|ENST00000314636|DHFR2;ENSG00000228716|ENST00000439211|DHFR;ENST00000513048.5_1_5:79929804-79945299:-|nuORF;ENST00000513314.1_1_5:79945206-79949851:-|nuORF;nc|ENSG00000228716|P00374-2|DHFR	27.882242232435846	0.5426732730940306	3				NaN	NaN	0	NaN	2413	3302	5714
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5718	20.461	NaN	832.1	30	0	147.94	0.106	+			20356	KESHEMGQAL	10	44	565.268798828125	NaN	0	565.268798828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KESHEMGQAL_	ENSG00000076382|ENST00000321765|SPAG5;SPAG5|p.N715Tfs*4|1|0.09|ENSG00000076382|chr17:28584669-28584669|T/-|frameshift_variant	27.64392233501311	0.4094068769737213	3				NaN	NaN	0	NaN	2414	3302	5714
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5719	20.463	NaN	861.61	30	0	213.77	0.032	+			44920	TVAGVHVK	8	35	405.7451477050781	NaN	0	405.7451477050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TVAGVHVK_	ENSG00000232838|ENST00000432901|PET117	24.20275056022122	1.7418937515398478	3				NaN	NaN	0	NaN	2415	3302	5714
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5727	20.481	NaN	8532.2	30	0	2308.1	0.214	+			5784	AVGTLQEAK	9	67	458.7588352569668	915.5031175807336	2	458.7587585449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVGTLQEAK_	ENSG00000168453|ENST00000381418|HR;nc|ENSG00000168453|O43593-2|HR	104.01359247289065	0.03510646158778409	3				NaN	NaN	0	NaN	2420	3305	5726
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5728	20.484	NaN	4701.5	30	0	611.02	0.106	+			44130	TQATIYVHK	9	72	530.7941234496592	1059.5736939661183	2	530.794189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TQATIYVHK_	ENSG00000090686|ENST00000308271|USP48;nc|ENSG00000090686|Q86UV5-2|USP48;nc|ENSG00000090686|Q86UV5-5|USP48;nc|ENSG00000090686|Q86UV5-8|USP48;USP48|p.L982Ffs*9|1|0.08|ENSG00000090686|chr1:21690037-21690038|-/GG|frameshift_variant	115.49404669440601	0.023927554121326553	3				NaN	NaN	0	NaN	2421	3305	5726
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5729	20.486	NaN	7424.9	30	0	1526.3	0.106	+			44131	TQATIYVHK	9	72	354.1980058208694	1059.5721880628082	3	354.5321044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TQATIYVHK_	ENSG00000090686|ENST00000308271|USP48;nc|ENSG00000090686|Q86UV5-2|USP48;nc|ENSG00000090686|Q86UV5-5|USP48;nc|ENSG00000090686|Q86UV5-8|USP48;USP48|p.L982Ffs*9|1|0.08|ENSG00000090686|chr1:21690037-21690038|-/GG|frameshift_variant	69.6276240434122	0.14239879520340665	3				NaN	NaN	0	NaN	2422	3305	5726
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5730	20.488	NaN	6359.4	30	0	1659.8	0.106	+			15199	GTSSAVSLK	9	56	425.23769516266344	848.4608373921269	2	425.2375793457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTSSAVSLK_	ENSG00000164828|ENST00000401592|SUN1;ENST00000340926.7_1_7:872152-889323:+|nuORF;ENST00000413171.6_1_7:872152-892516:+|nuORF;ENST00000427969.5_1_7:878456-882177:+|nuORF;ENST00000483996.1_1_7:872152-878624:+|nuORF;nc|ENSG00000164828|O94901-2|SUN1;nc|ENSG00000164828|O94901-3|SUN1;nc|ENSG00000164828|O94901-4|SUN1;nc|ENSG00000164828|O94901-5|SUN1;nc|ENSG00000164828|O94901-6|SUN1;nc|ENSG00000164828|O94901-7|SUN1;nc|ENSG00000164828|O94901-9|SUN1;SUN1|p.E739Gfs*27|1|0.41|ENSG00000164828|chr7:872532-872533|-/G|frameshift_variant	72.87924865735499	0.12833875048249987	3				NaN	NaN	0	NaN	2423	3305	5726
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5731	20.49	NaN	5779.8	30	0	4000.5	0.106	+			6123	AVPSNNIY	8	40	439.22454786918377	876.4345428051676	2	439.22412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVPSNNIY_	nc|ENSG00000151090|P10828-2|THRB	47.91560031466742	0.6071945918984287	3				NaN	NaN	0	NaN	2424	3305	5726
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5732	20.492	NaN	4562.5	30	0	1130.7	0.106	+			38787	SSMRSAKEQV	10	47	380.1894662816237	1137.546569445071	3	380.5237731933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_SSM(Oxidation (M))RSAKEQV_	ENSG00000167703|ENST00000301335|SLC43A2;ENST00000572135.5_1_17:1488956-1531469:-|nuORF;nc|ENSG00000167703|Q8N370-2|SLC43A2;nc|ENSG00000167703|Q8N370-3|SLC43A2;nc|ENSG00000167703|Q8N370-4|SLC43A2	40.05817265558897	0.5486090488315611	3				NaN	NaN	0	NaN	2425	3305	5726
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5733	20.494	NaN	2058.8	30	0	326.24	0.033			+	16867	HPGGWSDF	8	50	451.69353072497535	901.3725085167507	2	451.69354248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HPGGWSDF_	REV__ENSG00000149328|ENST00000535456|GLB1L2;REV__ENST00000529077.5_1_11:134236970-134242406:+|nuORF	28.2542754592877	0.7411748056684583	3				NaN	NaN	0	NaN	2426	3305	5726
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5738	20.508	NaN	9685	30	0	635.47	0.214	+			34314	RTMSEAALVRK	11	69	421.2400952249627	1260.6984562750881	3	421.2396545410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTMSEAALVRK_	ENSG00000169435|ENST00000307439|RASSF6;nc|ENSG00000169435|Q6ZTQ3-3|RASSF6;nc|ENSG00000169435|Q6ZTQ3-4|RASSF6;nc|ENSG00000169435|Q6ZTQ3|RASSF6;RASSF6|p.K253Nfs*25|1|0.16|ENSG00000169435|chr4:73582195-73582195|T/-|frameshift_variant	96.33408219706786	0.07284471942732389	3				NaN	NaN	0	NaN	2428	3308	5737
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5739	20.511	NaN	3154.4	30	0	596.8	0.106				-1	EATGMPAGKQ	10	61	503.23664924085534	NaN	0	503.2370910644531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_EATGM(Oxidation (M))PAGKQ_	ENSG00000099995|ENST00000215793|SF3A1;nc|ENSG00000099995|Q15459-2|SF3A1	47.657333605630114	0.3204131577145918	3				NaN	NaN	0	NaN	2429	3308	5737
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5740	20.513	NaN	5745.4	30	0	2107.8	0.106			+	-1	CVGLTTCGTGK	11	70	548.7598315310852	1095.5051101289703	2	548.7606201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_C(Carbamidomethyl (C))VGLTTCGTGK_	REV__tr|U7STW0|U7STW0_FUSNUHydroxylaminereductaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=hcpPE=3SV=1	39.252832667884924	0.5681665794958463	3				NaN	NaN	0	NaN	2430	3308	5737
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5741	20.515	NaN	2120.9	30	0	239.13	0.106	+			43614	TINGHNAEV	9	50	477.7359081234316	953.4572633136632	2	477.7349548339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TINGHNAEV_	ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;ENST00000495810.1_1_7:26235422-26236427:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1	52.936696900407355	0.27249468807391813	3				NaN	NaN	0	NaN	2431	3308	5737
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5742	20.517	NaN	1745	30	0	142.18	0.106	+			42982	TEKHVQVAV	9	55	505.7849618873692	NaN	0	505.7843017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TEKHVQVAV_	ENSG00000145604|ENST00000274255|SKP2;nc|ENSG00000145604|Q13309-2|SKP2;nc|ENSG00000145604|Q13309-4|SKP2	54.776311868738084	0.17377682019723872	3				NaN	NaN	0	NaN	2432	3308	5737
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5743	20.518	NaN	5562.5	30	0	735.69	0.106			+	18996	IVVAPAGRCEV	11	59	371.8737536464849	1112.5994315396547	3	371.8731994628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IVVAPAGRCEV_	REV__ENSG00000151640|ENST00000338492|DPYSL4	30.568863376406313	0.6691487505135859	3				NaN	NaN	0	NaN	2433	3308	5737
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5744	20.52	NaN	1894.1	30	0	356.26	0.034	+			36324	SESPRSTSL	9	54	482.2410263960483	962.4674998588966	2	482.2406005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SESPRSTSL_	ENSG00000116514|ENST00000235150|RNF19B;nc|ENSG00000116514|Q6ZMZ0-2|RNF19B;nc|ENSG00000116514|Q6ZMZ0-3|RNF19B;nc|ENSG00000116514|Q6ZMZ0|RNF19B	65.46538089061403	0.16805504838372562	3				NaN	NaN	0	NaN	2434	3308	5737
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5751	20.536	NaN	1250.8	30	0	127.65	0.214			+	13817	GQPLSVQHD	9	45	490.7428567706306	NaN	0	490.7436218261719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GQPLSVQHD_	REV__ENSG00000164620|ENST00000297164|RELL2	34.172542307311794	0.30503706118289736	3				NaN	NaN	0	NaN	2438	3311	5750
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5752	20.54	NaN	6332.9	30	0	1044.5	0.106	+			583	ADKTKARIVL	10	60	372.2366501680742	1113.6881211044226	3	372.23663330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ADKTKARIVL_	ENSG00000169299|ENST00000381967|PGM2;ENST00000505986.5_1_4:37841281-37848924:+|nuORF;ENST00000515668.5_1_4:37841869-37848777:+|nuORF;nc|ENSG00000169299|Q96G03-2|PGM2	43.650786325866115	0.5155049133366767	3				NaN	NaN	0	NaN	2439	3311	5750
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5753	20.542	NaN	4246	30	0	795.7	0.106	+			36292	SEREMRNTL	9	70	568.2800194548904	1134.5454859765807	2	568.280029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEREMRNTL_	ENSG00000113810|ENST00000357388|SMC4;ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4	88.17693792209575	0.07000514020414955	3				NaN	NaN	0	NaN	2440	3311	5750
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5754	20.544	NaN	1027	30	0	145.85	0.106	+			9565	ELGFQDSK	8	45	462.2273873215433	NaN	0	462.2276916503906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ELGFQDSK_	ENSG00000169403|ENST00000373857|PTAFR	23.04248740728303	1.7418937515398478	3				NaN	NaN	0	NaN	2441	3311	5750
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5755	20.546	NaN	1496	30	0	199.61	0.106	+			34222	RTEWGRVA	8	49	487.7612988619572	973.5080447907144	2	487.7603759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RTEWGRVA_	TCERG1L|p.R291W|1|0.35|ENSG00000176769|chr10:131166871-131166871|G/A|missense_variant	35.61828744233558	0.6843154725607303	3				NaN	NaN	0	NaN	2442	3311	5750
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5756	20.547	NaN	1477.8	30	0	316.54	0.106	+			32006	QRKVLTLEK	9	57	557.8509042081122	1113.6872554830243	2	557.85107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QRKVLTLEK_	ENSG00000161835|ENST00000293662|TAMALIN	41.080066990542036	0.4075906340427724	3				NaN	NaN	0	NaN	2443	3311	5750
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5757	20.549	NaN	6053.7	30	0	1285.7	0.035	+			2697	AQPRLPKPA	9	36	326.53466053394135	976.5821522020241	3	326.5342102050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AQPRLPKPA_	nc|ENSG00000293328|Q8N9T2|NKAPP1	18.262085536374414	0.6112419832031293	3				NaN	NaN	0	NaN	2444	3311	5750
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5765	20.567	NaN	4414.9	30	0	780.44	0.214	+			22130	KSPEKDVPM	9	59	515.7657823721618	1029.5170118111234	2	515.7655639648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSPEKDVPM_	ENSG00000065000|ENST00000643116|AP3D1;nc|ENSG00000065000|O14617-2|AP3D1;nc|ENSG00000065000|O14617-3|AP3D1;nc|ENSG00000065000|O14617|AP3D1	68.84614121027924	0.14577793175421136	3				NaN	NaN	0	NaN	2449	3314	5764
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5766	20.571	NaN	5554.5	30	0	1499.5	0.106	+			19291	KAFVGAFKK	9	61	332.5387514623824	994.5944249873471	3	332.53839111328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KAFVGAFKK_	ENSG00000160796|ENST00000450053|NBEAL2;NBEAL2|p.C1705Vfs*45|1|0.24|ENSG00000160796|chr3:47002246-47002246|T/-|frameshift_variant;NBEAL2|p.P1303Lfs*63|1|0.21|ENSG00000160796|chr3:47000002-47000002|C/-|frameshift_variant;NBEAL2|p.Y1346Tfs*20|1|0.44|ENSG00000160796|chr3:47000132-47000132|T/-|frameshift_variant;nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2;nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2	37.81151784470057	0.4459294069877048	3				NaN	NaN	0	NaN	2450	3314	5764
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5767	20.573	NaN	9603.6	30	0	1188.4	0.106	+			5527	AVAIKAMAK	9	65	451.7783086701211	901.5420644070422	2	451.7779235839844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVAIKAMAK_	EIF5A|p.A145P|1|0.15|ENSG00000132507|chr17:7311608-7311608|G/C|missense_variant;ENSG00000132507|ENST00000336458|EIF5A;ENSG00000253626|ENST00000520547|EIF5AL1;nc|ENSG00000132507|P63241-2|EIF5A	76.7741389293348	0.11149722112137898	3				NaN	NaN	0	NaN	2451	3314	5764
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5768	20.575	NaN	2818.4	30	0	590.28	0.106	+			20886	KIQETFAQK	9	61	546.8065334573536	1091.598513981507	2	546.806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KIQETFAQK_	ENST00000519940.5_1_19:48735037-48741646:-|nuORF	99.01295224348159	0.040209060045561164	3				NaN	NaN	0	NaN	2452	3314	5764
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5769	20.576	NaN	2584.5	30	0	1131.2	0.106				-1	MLQEIRESL	9	37	378.86522546294304	1133.573846989029	3	379.18902587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_M(Oxidation (M))LQEIRESL_	ENSG00000131023|ENST00000543571|LATS1;LATS1|p.E689Nfs*18|1|0.35|ENSG00000131023|chr6:149680404-149680404|T/-|frameshift_variant;LATS1|p.F1039Lfs*19|1|0.19|ENSG00000131023|chr6:149662005-149662005|A/-|frameshift_variant;LATS1|p.K662Nfs*3|1|0.44|ENSG00000131023|chr6:149683103-149683103|T/-|frameshift_variant;LATS1|p.V245Dfs*73|1|0.06|ENSG00000131023|chr6:149684355-149684356|-/TCTCCCGAAT|frameshift_variant;LATS1|p.Y808Nfs*12|1|0.09|ENSG00000131023|chr6:149680046-149680047|-/ATTTATT|frameshift_variant;nc|ENSG00000131023|O95835-2|LATS1	32.81241826257853	0.4965981579233955	3				NaN	NaN	0	NaN	2453	3314	5764
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5770	20.578	NaN	1330.1	30	0	218.41	0.106			+	22541	KTRNARKV	8	50	486.8082017159035	971.6018504986071	2	486.8079833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KTRNARKV_	REV__ENSG00000196792|ENST00000357479|STRN3;REV__STRN3|p.E617Kfs*24|1|0.23|ENSG00000196792|chr14:30906916-30906916|C/-|frameshift_variant;REV__STRN3|p.N599Ifs*42|1|0.35|ENSG00000196792|chr14:30906969-30906969|T/-|frameshift_variant	35.61828744233558	0.6843154725607303	3				NaN	NaN	0	NaN	2454	3314	5764
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5771	20.58	NaN	979.74	30	0	195.54	0.033	+			24396	LGAAGRPPP	9	37	418.2426659924631	NaN	0	418.24273681640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LGAAGRPPP_	ENST00000412483.1_1_1:234349769-234350697:-|nuORF	35.200714571348534	0.2998460331538257	3				NaN	NaN	0	NaN	2455	3314	5764
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5783	20.605	NaN	17810	30	0	3162.8	0.214	+			41082	SVINKVTEK	9	91	509.300822800549	1016.587092667898	2	509.3008728027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVINKVTEK_	ENSG00000124784|ENST00000379834|RIOK1;RIOK1|p.E533Rfs*20|1|0.19|ENSG00000124784|chr6:7414384-7414385|-/A|frameshift_variant	145.46060221211434	0.007927189773590037	3				NaN	NaN	0	NaN	2464	3317	5782
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5784	20.609	NaN	33670	30	0	5123.3	0.106				-1	 	0	86	368.8701249384063	1103.588545415419	3	368.8697814941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2465	3317	5782
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5785	20.611	NaN	14688	30	0	5772.2	0.106			+	5363	ATWCVPILVLI	11	47	409.9108991988583	1226.710868196775	3	409.9105529785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATWCVPILVLI_	REV__ENSG00000213937|ENST00000445369|CLDN9	37.50817390946774	0.5920388381045607	3				NaN	NaN	0	NaN	2466	3317	5782
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5786	20.612	NaN	13571	30	0	2661.5	0.106	+			47516	VQNGKHFKF	9	71	552.8012163406257	1103.5878797480514	2	552.801513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VQNGKHFKF_	ENSG00000163586|ENST00000295834|FABP1	138.06239232086	0.011389075116295402	3				NaN	NaN	0	NaN	2467	3317	5782
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5787	20.614	NaN	3497.5	30	0	435.56	0.106	+			51321	YSLGREQVA	9	60	511.76771261042296	NaN	0	511.7677307128906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YSLGREQVA_	OR8H2|p.D271E|1|0.19|ENSG00000181767|chr11:56105855-56105855|T/A|missense_variant	49.44154591367651	0.21054156626303966	3				NaN	NaN	0	NaN	2468	3317	5782
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5788	20.616	NaN	3725	30	0	1149.8	0.033			+	43849	TLVKPRAG	8	56	421.26673867018735	840.5189244071747	2	421.26629638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TLVKPRAG_	REV__nc|ENSG00000189195|Q5XKL5-4|BTBD8;REV__nc|ENSG00000189195|Q5XKL5|BTBD8	35.200714571348534	0.6875396545722289	3				NaN	NaN	0	NaN	2469	3317	5782
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5789	20.617	NaN	1578.1	30	0	313.73	0.14	+			19292	KAFVGAFKK	9	59	498.3056617423727	994.5967705515454	2	498.3056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KAFVGAFKK_	ENSG00000160796|ENST00000450053|NBEAL2;NBEAL2|p.C1705Vfs*45|1|0.24|ENSG00000160796|chr3:47002246-47002246|T/-|frameshift_variant;NBEAL2|p.P1303Lfs*63|1|0.21|ENSG00000160796|chr3:47000002-47000002|C/-|frameshift_variant;NBEAL2|p.Y1346Tfs*20|1|0.44|ENSG00000160796|chr3:47000132-47000132|T/-|frameshift_variant;nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2;nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2	33.921630207806714	0.48623198279849766	3				NaN	NaN	0	NaN	2470	3317	5782
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5800	20.642	NaN	4178.3	30	0	826.8	0.214	+			48582	VTQNGGLYK	9	65	490.26438964967525	978.5142263661505	2	490.2635803222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTQNGGLYK_	ENSG00000100596|ENST00000216484|SPTLC2	152.06079943815163	0.00638878961959199	3				NaN	NaN	0	NaN	2478	3320	5799
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5801	20.646	NaN	8815.5	30	0	2796.5	0.106				-1	 	0	50	403.5598630092662	1207.6577596279988	3	403.5590515136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2479	3320	5799
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5802	20.648	NaN	3095.8	30	0	704.57	0.106	+			33174	REVAGHTEQL	10	61	570.2939392552157	1138.5733255772313	2	570.294189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_REVAGHTEQL_	CON__P08727;ENSG00000171345|ENST00000361566|KRT19;ENST00000468880.1_1_17:39680334-39681232:-|nuORF;ENST00000471565.2_1_17:39680334-39680852:-|nuORF	39.873155843976775	0.5503138860789152	3				NaN	NaN	0	NaN	2480	3320	5799
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5803	20.649	NaN	2196.2	30	0	305.91	0.106	+			45823	VAIKCVAK	8	51	416.2601513743215	830.505749815443	2	416.2596435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VAIKCVAK_	ENSG00000140474|ENST00000440863|ULK3;ENST00000562395.5_1_15:75134617-75135536:-|nuORF;ENST00000570276.5_1_15:75132809-75135659:-|nuORF;nc|ENSG00000140474|Q6PHR2-2|ULK3;nc|ENSG00000140474|Q6PHR2-3|ULK3;nc|ENSG00000140474|Q6PHR2-4|ULK3	57.81127852772723	0.5234495074909924	3				NaN	NaN	0	NaN	2481	3320	5799
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5804	20.651	NaN	2293.2	30	0	832.82	0.106			+	13840	GQSVRGQHA	9	44	470.2425557071398	938.4705584810796	2	471.24322509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GQSVRGQHA_	REV__ENST00000405147.7_1_22:38014465-38015850:+|nuORF	38.80614096846853	0.43426287593479557	3				NaN	NaN	0	NaN	2482	3320	5799
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5805	20.653	NaN	4090.6	30	0	988.38	0.035			+	-1	CLIRMAKR	8	63	503.7876768147635	NaN	0	503.7877197265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_CLIRM(Oxidation (M))AKR_	REV__ENST00000388822.9_1_4:119606555-119606585:+|nuORF	37.028477286268924	1.7418937515398478	3				NaN	NaN	0	NaN	2483	3320	5799
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5806	20.654	NaN	645.28	30	0	74.744	0.138			+	33868	RRLICGVA	8	37	444.2675859723585	886.520619011517	2	444.2670593261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RRLICGVA_	REV__ENST00000203664.9_1_14:94492725-94492884:+|nuORF	21.70233525837049	0.7917639344264583	3				NaN	NaN	0	NaN	2484	3320	5799
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5813	20.673	NaN	12050	30	0	2838.1	0.214				-1	 	0	64	473.7643362365659	945.5141195399318	2	473.7635498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2488	3323	5812
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5814	20.677	NaN	8610.3	30	0	1767.2	0.106	+			40665	SVASIEEY	8	62	449.2122502813504	896.4099476295008	2	449.2119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVASIEEY_	ENSG00000169047|ENST00000305123|IRS1;IRS1|p.H598Tfs*38|3|0.31|ENSG00000169047|chr2:226796948-226796948|C/-|frameshift_variant	52.29916861842294	0.578018602984656	3				NaN	NaN	0	NaN	2489	3323	5812
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5815	20.679	NaN	2938.2	30	0	419.86	0.106	+			47668	VSDPSSPQYGK	11	60	582.7806100667804	1163.5466672003606	2	582.780517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSDPSSPQYGK_	ENSG00000166340|ENST00000299427|TPP1;ENST00000428886.6_1_11:6638445-6640631:-|nuORF;TPP1|p.I484Sfs*4|1|0.24|ENSG00000166340|chr11:6614968-6614968|C/-|frameshift_variant	99.78786539795823	0.061125669442822994	3				NaN	NaN	0	NaN	2490	3323	5812
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5816	20.68	NaN	3625.4	30	0	417.85	0.106	+			21060	KKLEDEAAR	9	59	530.2936440144988	NaN	0	530.2940063476562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KKLEDEAAR_	ENSG00000198399|ENST00000355123|ITSN2;ITSN2|p.A1240Pfs*15|1|0.05|ENSG00000198399|chr2:24217995-24217996|-/AAGGG|frameshift_variant;ITSN2|p.A1583Pfs*86|1|0.25|ENSG00000198399|chr2:24205230-24205230|T/-|frameshift_variant;ITSN2|p.F1478Qfs*12|1|0.3|ENSG00000198399|chr2:24209858-24209859|AA/-|frameshift_variant;ITSN2|p.T790Nfs*11|1|0.43|ENSG00000198399|chr2:24261729-24261730|-/T|frameshift_variant;nc|ENSG00000198399|Q9NZM3-2|ITSN2;nc|ENSG00000198399|Q9NZM3-3|ITSN2;nc|ENSG00000198399|Q9NZM3-4|ITSN2	85.86182877749512	0.05129763505578642	3				NaN	NaN	0	NaN	2491	3323	5812
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5817	20.682	NaN	1325.7	30	0	140.92	0.106			+	1610	AGMAGPTVVVE	11	55	515.7657823721618	1029.5170118111234	2	515.7659912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AGMAGPTVVVE_	REV__ENSG00000135622|ENST00000357877|SEMA4F;REV__nc|ENSG00000135622|O95754-2|SEMA4F	44.377184641726394	0.49804979881800077	3				NaN	NaN	0	NaN	2492	3323	5812
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5818	20.684	NaN	2595.4	30	0	307.12	0.035	+			46345	VEKPAETHL	9	54	512.2760768304321	1022.5376007276642	2	512.2762451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VEKPAETHL_	ENSG00000198171|ENST00000354488|DDRGK1;nc|ENSG00000198171|Q96HY6-2|DDRGK1	62.107414245175825	0.1960472003779324	3				NaN	NaN	0	NaN	2493	3323	5812
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5819	20.685	NaN	1400	30	0	315.8	0.141	+			40134	STQDTTAFSK	10	57	543.2593994140625	NaN	0	543.2593994140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STQDTTAFSK_	ENSG00000145113|ENST00000463781|MUC4;MUC4|p.L3985Ffs*274|1|0.3|ENSG00000145113|chr3:195779627-195779627|G/-|frameshift_variant;MUC4|p.N4902Tfs*8|1|0.37|ENSG00000145113|chr3:195761027-195761027|T/-|frameshift_variant;nc|ENSG00000145113|Q99102-10|MUC4;nc|ENSG00000145113|Q99102-11|MUC4;nc|ENSG00000145113|Q99102-15|MUC4;nc|ENSG00000145113|Q99102-16|MUC4;nc|ENSG00000145113|Q99102-17|MUC4;nc|ENSG00000145113|Q99102-2|MUC4;nc|ENSG00000145113|Q99102-3|MUC4;nc|ENSG00000145113|Q99102-5|MUC4;nc|ENSG00000145113|Q99102-7|MUC4;nc|ENSG00000145113|Q99102-8|MUC4;nc|ENSG00000145113|Q99102-9|MUC4	92.23892857375223	0.045399032405053316	3				NaN	NaN	0	NaN	2494	3323	5812
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5827	20.704	NaN	22713	30	0	12102	0.214				-1	 	0	62	384.77251356766465	767.5304742021293	2	384.7720642089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2499	3326	5826
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5828	20.708	NaN	3340.6	30	0	947.53	0.106	+			663	AEAHWAVR	8	53	470.2425557071398	938.4705584810796	2	470.24261474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEAHWAVR_	ENSG00000127527|ENST00000455140|EPS15L1;ENST00000597559.5_1_19:16547732-16582756:-|nuORF;EPS15L1|p.P231Hfs*37|1|0.27|ENSG00000127527|chr19:16425183-16425183|G/-|frameshift_variant;nc|ENSG00000127527|Q9UBC2-3|EPS15L1;nc|ENSG00000127527|Q9UBC2-4|EPS15L1;nc|ENSG00000127527|Q9UBC2|EPS15L1	40.5726180659479	0.6527593143185008	3				NaN	NaN	0	NaN	2500	3326	5826
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5829	20.71	NaN	4353.5	30	0	762.99	0.106	+			43340	TGATLYLLR	9	36	336.53450849413684	1006.5816960826105	3	336.5343933105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TGATLYLLR_	ENSG00000189043|ENST00000339600|NDUFA4;ENST00000486007.1_1_7:10977674-10979684:-|nuORF;NDUFA4|p.A37T|1|0.4|ENSG00000189043|chr7:10938830-10938830|C/T|missense_variant	24.20275056022122	0.577060078256802	3				NaN	NaN	0	NaN	2501	3326	5826
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5830	20.712	NaN	2308.6	30	0	348.34	0.106	+			37177	SIYKPGQTVK	10	63	560.8222993214318	1119.6300457096636	2	560.8226318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SIYKPGQTVK_	ENSG00000175899|ENST00000318602|A2M	51.52775601994872	0.4429225830406686	3				NaN	NaN	0	NaN	2502	3326	5826
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5831	20.714	NaN	1310.9	30	0	205.87	0.106	+			14034	GSGKVTFPK	9	51	460.76368067046513	919.5128084077303	2	460.7635192871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GSGKVTFPK_	AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK	59.93077597824379	0.21419174904018318	3				NaN	NaN	0	NaN	2503	3326	5826
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5832	20.715	NaN	2160.7	30	0	450.76	0.033	+			45941	VARVTQPA	8	57	421.2485771360583	840.4826013389167	2	421.2478332519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VARVTQPA_	MTCL1|p.P1448Afs*83|1|0.4|ENSG00000168502|chr18:8824888-8824889|-/G|frameshift_variant	47.91560031466742	0.6071945918984287	3				NaN	NaN	0	NaN	2504	3326	5826
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5841	20.735	NaN	13298	30	0	3242.2	0.214				-1	 	0	63	450.2638087494392	898.5130645656784	2	450.2632751464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2510	3329	5840
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5842	20.739	NaN	13851	30	0	1969.2	0.106				-1	 	0	71	533.8046260974766	1065.594699261753	2	533.804443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2511	3329	5840
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5843	20.74	NaN	5041.9	30	0	2798.4	0.106				-1	RVQEAVESMVK	11	66	646.3378559056849	1290.6611588781698	2	646.3377075195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_RVQEAVESM(Oxidation (M))VK_	ENSG00000035141|ENST00000430566|FAM136A;ENST00000460307.1_1_2:70528513-70529143:-|nuORF;ENST00000498665.1_1_2:70527944-70529143:-|nuORF;nc|ENSG00000035141|Q96C01|FAM136A	52.167168403610894	0.39337392184041037	3				NaN	NaN	0	NaN	2512	3329	5840
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5844	20.742	NaN	3457.9	30	0	677.17	0.106	+			39584	STGPTLQAR	9	57	465.7529467111943	929.4913404891886	2	465.7532043457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STGPTLQAR_	CFTR|p.E1044Dfs*20|1|0.04|ENSG00000001626|chr7:117610661-117610662|-/TCAAAGAAAAC|frameshift_variant;CFTR|p.G1208Afs*3|1|0.3|ENSG00000001626|chr7:117627672-117627672|G/-|frameshift_variant;CFTR|p.L1258Ffs*7|1|0.26|ENSG00000001626|chr7:117642487-117642488|-/T|frameshift_variant;CFTR|p.S1297Lfs*31|1|0.28|ENSG00000001626|chr7:117652852-117652852|T/-|frameshift_variant;ENSG00000001626|ENST00000003084|CFTR;nc|ENSG00000001626|P13569-2|CFTR	40.05817265558897	0.419577045485086	3				NaN	NaN	0	NaN	2513	3329	5840
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5845	20.744	NaN	2701.6	30	0	986.43	0.106			+	25168	LLVNPLSFAF	10	41	374.21697955197146	1119.6291092561144	3	374.2165832519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LLVNPLSFAF_	REV__ADGRF3|p.I625Yfs*24|1|0.1|ENSG00000173567|chr2:26311855-26311856|-/A|frameshift_variant;REV__ENSG00000173567|ENST00000651242|ADGRF3;REV__ENST00000459892.5_1_2:26531956-26538428:-|nuORF;REV__nc|ENSG00000173567|Q8IZF5-2|ADGRF3;REV__nc|ENSG00000173567|Q8IZF5-3|ADGRF3;REV__nc|ENSG00000173567|Q8IZF5|ADGRF3	17.364965105453717	0.7282106878714807	3				NaN	NaN	0	NaN	2514	3329	5840
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5846	20.746	NaN	1639.7	30	0	281.06	0.106	+			9347	EIQDENNH	8	55	499.7126600101981	997.4107670871962	2	499.7121887207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EIQDENNH_	ENSG00000150275|ENST00000644397|PCDH15;ENST00000463095.2_1_10:55581620-55664971:-|nuORF;nc|ENSG00000150275|Q96QU1-2|PCDH15;nc|ENSG00000150275|Q96QU1-4|PCDH15;nc|ENSG00000150275|Q96QU1-6|PCDH15;nc|ENSG00000150275|Q96QU1|PCDH15;PCDH15|p.K1263Rfs*2|2|0.31|ENSG00000150275|chr10:53857193-53857193|T/-|frameshift_variant	37.15910966729921	0.6739408393984688	3				NaN	NaN	0	NaN	2515	3329	5840
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5847	20.748	NaN	824.05	30	0	91.668	0.034				-1	LGFADLNLA	9	39	488.25975538606286	974.5049578389257	2	488.2583923339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LGFADLNLA_	ENSG00000162636|ENST00000370035|EEIG2;ENSG00000167106|ENST00000373095|EEIG1;ENST00000300434.3_1_9:130707799-130712818:-|nuORF;nc|ENSG00000162636|Q5T8I3-2|EEIG2;nc|ENSG00000167106|Q5T9C2-2|EEIG1	37.15910966729921	0.4535818937225704	3				NaN	NaN	0	NaN	2516	3329	5840
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5856	20.768	NaN	8348.9	30	0	1133.9	0.214	+			36082	SEKDTKQIL	9	65	531.2960947645312	1060.5776365958623	2	531.2958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEKDTKQIL_	ENSG00000183207|ENST00000595090|RUVBL2;ENST00000596247.5_1_19:49507512-49519096:+|nuORF;nc|ENSG00000183207|Q9Y230-2|RUVBL2	90.14881205920913	0.06444578693273594	3				NaN	NaN	0	NaN	2522	3332	5855
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5857	20.771	NaN	9426.6	30	0	3783.7	0.106				-1	 	0	42	346.85768028723066	1037.551211461892	3	346.857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2523	3332	5855
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5858	20.773	NaN	2655.1	30	0	325.19	0.106	+			11142	FGGLGSKSK	9	54	440.7481248156517	879.4816966981034	2	440.7475891113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FGGLGSKSK_	ENSG00000124942|ENST00000378024|AHNAK	124.08010499294276	0.018729767491916592	3				NaN	NaN	0	NaN	2524	3332	5855
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5859	20.775	NaN	5017	30	0	1869.9	0.106			+	10071	ESIEAGKSKL	10	48	354.5330606059232	1060.5773524179697	3	354.53277587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ESIEAGKSKL_	REV__EIF3M|p.K161Sfs*5|2|0.14|ENSG00000149100|chr11:32589584-32589584|A/-|frameshift_variant;REV__ENSG00000149100|ENST00000531120|EIF3M;REV__ENST00000531186.5_1_11:32605433-32610279:+|nuORF	41.42661286455405	0.5359995577334734	3				NaN	NaN	0	NaN	2525	3332	5855
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5860	20.777	NaN	3776.3	30	0	724.68	0.106			+	-1	HPDAQPQVMG	10	62	548.2482577685782	1094.4819626039564	2	548.2484741210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_HPDAQPQVM(Oxidation (M))G_	REV__ENSG00000129646|ENST00000680821|QRICH2;REV__nc|ENSG00000129646|Q9H0J4-2|QRICH2;REV__nc|ENSG00000129646|Q9H0J4|QRICH2	39.252832667884924	0.5560298534376815	3				NaN	NaN	0	NaN	2526	3332	5855
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5861	20.779	NaN	3259.6	30	0	783.42	0.035	+			2987	ASFDKAKLK	9	61	504.29846411061	1006.58237528802	2	504.29736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASFDKAKLK_	ENSG00000034510|ENST00000233143|TMSB10	75.04331003522576	0.118981335847003	3				NaN	NaN	0	NaN	2527	3332	5855
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5862	20.779	NaN	1064.7	30	0	181.6	0.144			+	15651	GVLPWPTPGP	10	35	340.853868483267	NaN	0	340.8536376953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GVLPWPTPGP_	REV__CYP2U1|p.F337Lfs*34|1|0.44|ENSG00000155016|chr4:107945487-107945487|T/-|frameshift_variant;REV__CYP2U1|p.K292Rfs*3|1|0.45|ENSG00000155016|chr4:107945351-107945351|A/-|frameshift_variant;REV__ENSG00000155016|ENST00000332884|CYP2U1;REV__ENST00000508453.1_1_4:108852799-108857674:+|nuORF;REV__ENST00000513302.1_1_4:108852745-108856764:+|nuORF;REV__nc|ENSG00000155016|Q7Z449-2|CYP2U1	24.519189625965996	0.41966695327750003	3				NaN	NaN	0	NaN	2528	3332	5855
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5869	20.797	NaN	2617.7	30	0	595.38	0.214	+			39311	STATATVSVGK	11	63	511.2800214696046	1020.5454900060092	2	511.2800598144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STATATVSVGK_	ENSG00000261150|ENST00000615648|EPPK1;EPPK1|p.G2015Vfs*36|2|0.33|ENSG00000261150|chr8:143867210-143867210|C/-|frameshift_variant;EPPK1|p.Q829Rfs*8|1|0.05|ENSG00000261150|chr8:143870770-143870770|C/-|frameshift_variant;EPPK1|p.Y695Ifs*68|1|0.36|ENSG00000261150|chr8:143871171-143871172|-/T|frameshift_variant	104.06999374311218	0.052272977646279854	3				NaN	NaN	0	NaN	2532	3335	5868
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5870	20.801	NaN	2808.7	30	0	463.48	0.106			+	9917	EQRQGPPTL	9	38	342.51742977215815	1024.5304599166745	3	342.51727294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EQRQGPPTL_	REV__ENST00000452400.6_1_8:71126260-71128976:-|nuORF	21.9598887501803	0.5980208138527809	3				NaN	NaN	0	NaN	2533	3335	5868
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5871	20.803	NaN	1269.1	30	0	178.94	0.106	+			8650	EDLRATMR	8	55	496.25037312488166	NaN	0	496.2746276855469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EDLRATMR_	ENSG00000173898|ENST00000533211|SPTBN2;nc|ENSG00000173898|O15020-2|SPTBN2	39.252832667884924	1.7418937515398478	3				NaN	NaN	0	NaN	2534	3335	5868
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5872	20.805	NaN	1246.8	30	0	451.69	0.106			+	42237	TAANTISIP	9	38	444.24551127693184	886.4764696206637	2	444.2447204589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TAANTISIP_	REV__ENSG00000136367|ENST00000419474|ZFHX2	31.529811441608018	0.5085848003137583	3				NaN	NaN	0	NaN	2535	3335	5868
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5873	20.806	NaN	2077.1	30	0	272.7	0.106			+	16695	HKHRLAIWL	9	46	391.90355054570074	1172.6888222373022	3	391.9030456542969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HKHRLAIWL_	REV__ENSG00000136854|ENST00000373299|STXBP1;REV__nc|ENSG00000136854|P61764-2|STXBP1;REV__STXBP1|p.A297T|1|0.26|ENSG00000136854|chr9:127668174-127668174|G/A|missense_variant	34.172542307311794	0.4838870758800184	3				NaN	NaN	0	NaN	2536	3335	5868
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5874	20.808	NaN	612.54	30	0	116.67	0.035	+			31846	QPSWGVDPK	9	31	507.2553405761719	NaN	0	507.2553405761719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QPSWGVDPK_	ENSG00000132205|ENST00000254528|EMILIN2	14.864876125193954	0.3866709117995958	3				NaN	NaN	0	NaN	2537	3335	5868
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5884	20.83	NaN	2507.4	30	0	175.07	0.214	+			24363	LFPPGRGAW	9	64	500.7717486713829	999.5289444095658	2	500.771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LFPPGRGAW_	ENST00000431183.6_2_2:130934202-130939226:-|nuORF	52.29916861842294	0.2778091507991977	3				NaN	NaN	0	NaN	2544	3338	5883
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5885	20.833	NaN	2436.3	30	0	323.52	0.106	+			49414	VVVASTVQK	9	61	465.7848815917969	NaN	0	465.7848815917969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVVASTVQK_	ENSG00000117139|ENST00000367265|KDM5B;nc|ENSG00000117139|Q9UGL1-2|KDM5B	62.107414245175825	0.1403307765918332	3				NaN	NaN	0	NaN	2545	3338	5883
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5886	20.835	NaN	938.97	30	0	129.88	0.106			+	-1	LICHTLFK	8	45	516.2907104492188	NaN	0	516.2907104492188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LIC(Carbamidomethyl (C))HTLFK_	REV__FBXO33|p.F425C|1|0.29|ENSG00000165355|chr14:39401298-39401298|A/C|missense_variant	18.324413293986947	1.7418937515398478	3				NaN	NaN	0	NaN	2546	3338	5883
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5887	20.837	NaN	1413.3	30	0	176.8	0.035	+			9082	EGICCIIAGL	10	51	496.252197265625	NaN	0	496.252197265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EGICCIIAGL_	ENSG00000170482|ENST00000348729|SLC23A1;nc|ENSG00000170482|Q9UHI7-2|SLC23A1	30.503639358989545	0.4000169810673414	3				NaN	NaN	0	NaN	2547	3338	5883
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5891	20.851	NaN	3690.3	30	0	835.06	0.215	+			4796	ATNNMNLSR	9	64	510.74855304499033	1019.4825531567807	2	510.7486572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATNNMNLSR_	ENSG00000092148|ENST00000399332|HECTD1;ENST00000556004.1_1_14:31596982-31597923:-|nuORF;HECTD1|p.F2271Lfs*13|1|0.16|ENSG00000092148|chr14:31107059-31107059|A/-|frameshift_variant;HECTD1|p.I2041Lfs*27|1|0.36|ENSG00000092148|chr14:31113133-31113133|T/-|frameshift_variant;HECTD1|p.N1559H|1|0.32|ENSG00000092148|chr14:31128696-31128696|T/G|missense_variant	81.52500206392136	0.09095445986635249	3				NaN	NaN	0	NaN	2548	3341	5890
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5892	20.854	NaN	6637.3	30	0	610.8	0.106	+			1176	AENKEIQKL	9	82	536.8036279489074	1071.5927029646148	2	536.8035278320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AENKEIQKL_	ENSG00000106541|ENST00000419304|AGR2	153.1020116777495	0.006146099740049755	3				NaN	NaN	0	NaN	2549	3341	5890
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5893	20.856	NaN	1431.2	30	0	438.13	0.106			+	7495	DGKEYVSK	8	44	463.2348415393871	924.4551301455742	2	463.2344665527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DGKEYVSK_	REV__chr1:1699559-1699942|175|18.99|0.0|20.86|+|0|None,MMP23A|2	24.20275056022122	0.7724576178584145	3				NaN	NaN	0	NaN	2550	3341	5890
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5894	20.858	NaN	1135.4	30	0	159.48	0.036			+	24058	LEIGLEELGL	10	51	543.3071607829492	NaN	0	543.3070678710938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LEIGLEELGL_	REV__ENSG00000091140|ENST00000205402|DLD;REV__nc|ENSG00000091140|P09622-2|DLD;REV__nc|ENSG00000091140|P09622-3|DLD	40.05817265558897	0.3684561582319974	3				NaN	NaN	0	NaN	2551	3341	5890
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5901	20.874	NaN	39902	30	0	8943.2	0.214	+			1178	AENKEIQKL	9	91	358.2049896490781	1071.5931395474342	3	358.20465087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AENKEIQKL_	ENSG00000106541|ENST00000419304|AGR2	109.43880257439609	0.029570636687953285	3				NaN	NaN	0	NaN	2555	3344	5900
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5902	20.878	NaN	8706.1	30	0	5072.9	0.106	+			30883	QEKEQIKTL	9	61	558.8167942458181	1115.619035558436	2	558.8169555664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QEKEQIKTL_	CON__H-INV:HIT000292931;CON__P05787;CON__Q9H552;ENSG00000170421|ENST00000692008|KRT8;ENST00000409686.2_1_9:102067468-102068890:+|nuORF;ENST00000472924.1_1_3:160285772-160286174:+|nuORF;ENST00000550170.5_1_12:53294858-53298765:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	95.81516180277367	0.04847050768394289	3				NaN	NaN	0	NaN	2556	3344	5900
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5903	20.88	NaN	3304.7	30	0	332.59	0.106				-1	RILACGVAK	9	66	494.2922906557746	986.5700283783492	2	494.2916259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_RILAC(Carbamidomethyl (C))GVAK_	ENSG00000265972|ENST00000582401|TXNIP	56.72105179125745	0.24094814563026265	3				NaN	NaN	0	NaN	2557	3344	5900
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5904	20.882	NaN	1905.2	30	0	272.97	0.106	+			20785	KIADMGHLK	9	52	506.783754472982	NaN	0	506.78338623046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KIADMGHLK_	ENSG00000132646|ENST00000379143|PCNA	68.84614121027924	0.11159004992091766	3				NaN	NaN	0	NaN	2558	3344	5900
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5905	20.883	NaN	1711	30	0	148.88	0.106			+	-1	PDMSRNITL	9	58	531.7663165130209	1061.5180800928417	2	531.7664184570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_PDM(Oxidation (M))SRNITL_	REV__ENSG00000166902|ENST00000300151|MRPL16	42.396135135203025	0.392153681582562	3				NaN	NaN	0	NaN	2559	3344	5900
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5906	20.885	NaN	1819.8	30	0	355.76	0.106				-1	LISMGMCLGL	10	43	527.2618850949295	NaN	0	527.261962890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_LISM(Oxidation (M))GMCLGL_	ENST00000367204.5_1_1:204095788-204096322:+|nuORF	23.04248740728303	0.42010282974921537	3				NaN	NaN	0	NaN	2560	3344	5900
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5907	20.887	NaN	4725.2	30	0	774.05	0.034	+			40644	SVAQTVVQK	9	58	480.2799511706662	958.5453494081324	2	480.27984619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVAQTVVQK_	ENSG00000057294|ENST00000340811|PKP2;nc|ENSG00000057294|Q99959|PKP2	104.01359247289065	0.03510646158778409	3				NaN	NaN	0	NaN	2561	3344	5900
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5915	20.907	NaN	5968.4	30	0	2434.7	0.214				-1	MTDKSKGLKG	10	46	360.8617556592731	1079.5634375780194	3	360.861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))TDKSKGLKG_	tr|U7SUB3|U7SUB3_FUSNUButyryl-CoAdehydrogenaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01365PE=3SV=1	20.030474535948922	0.7146664069068879	3				NaN	NaN	0	NaN	2566	3347	5914
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5916	20.91	NaN	3554.7	30	0	421.84	0.106	+			40898	SVFNHAIRH	9	64	540.7890920069035	1079.563631080607	2	540.7884521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVFNHAIRH_	ENSG00000273749|ENST00000617928|CYFIP1;KBTBD2-CYFIP1|1|fusion	80.45461616416974	0.09558281504443908	3				NaN	NaN	0	NaN	2567	3347	5914
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5917	20.912	NaN	5145.3	30	0	889.07	0.106			+	24861	LKEGKGQL	8	62	436.7638083365889	871.5130637399778	2	436.76348876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LKEGKGQL_	REV__THAP6|p.R99G|1|0.29|ENSG00000174796|chr4:75521742-75521742|A/G|missense_variant	108.08749611321984	0.24621691167378246	3				NaN	NaN	0	NaN	2568	3347	5914
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5918	20.914	NaN	2350.5	30	0	813.93	0.106	+			50135	WIKNPNQI	8	32	338.1915758658382	NaN	0	338.191650390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_WIKNPNQI_	tr|U7SVL7|U7SVL7_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01269PE=4SV=1	40.5726180659479	1.7418937515398478	3				NaN	NaN	0	NaN	2569	3347	5914
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5919	20.916	NaN	15012	30	0	3622.6	0.106				-1	 	0	53	379.86519995813717	1136.5737704746116	3	379.8647766113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2570	3347	5914
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5920	20.918	NaN	4747.8	30	0	1072.8	0.106	+			3576	ASVDLKNTG	9	61	452.7401482071458	NaN	0	452.7402038574219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASVDLKNTG_	ENSG00000275395|ENST00000616721|FCGBP;FCGBP-ACSS2|1|fusion;FCGBP|p.G150Afs*25|1|0.19|ENSG00000275395|chr19:39927915-39927915|G/-|frameshift_variant;FCGBP|p.Q22K|1|0.08|ENSG00000275395|chr19:39928298-39928298|G/T|missense_variant;nc|ENSG00000275395|Q9Y6R7|FCGBP	112.41091882917199	0.007519870935348052	3				NaN	NaN	0	NaN	2571	3347	5914
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5921	20.919	NaN	9610.7	30	0	975.71	0.037	+			49776	VYQNHVQHL	9	71	569.2939401176476	1136.573327302095	2	569.2938232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VYQNHVQHL_	ARHGAP5|p.E893*|2|0.24|ENSG00000100852|chr14:32093338-32093339|-/T|frameshift_variant;ARHGAP5|p.F892Lfs*9|2|0.33|ENSG00000100852|chr14:32093339-32093339|T/-|frameshift_variant;ARHGAP5|p.F935Lfs*5|1|0.32|ENSG00000100852|chr14:32093469-32093469|T/-|frameshift_variant;ARHGAP5|p.N943Kfs*10|1|0.43|ENSG00000100852|chr14:32093489-32093490|-/A|frameshift_variant;ARHGAP5|p.S936*|1|0.32|ENSG00000100852|chr14:32093468-32093469|-/T|frameshift_variant;ARHGAP5|p.Y502Mfs*3|1|0.31|ENSG00000100852|chr14:32092168-32092168|T/-|frameshift_variant;ENSG00000100852|ENST00000345122|ARHGAP5;nc|ENSG00000100852|Q13017-2|ARHGAP5	143.10689835833298	0.00902249513149409	3				NaN	NaN	0	NaN	2572	3347	5914
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5934	20.947	NaN	40119	30	0	6570.6	0.214				-1	 	0	75	405.7457343550773	809.4769157769546	2	405.7451477050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2582	3350	5933
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5935	20.95	NaN	3609.5	30	0	463.75	0.106				-1	GMRIKNFRQ	9	68	583.3161152932528	1164.6176776533055	2	583.3162231445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_GM(Oxidation (M))RIKNFRQ_	tr|U7T3Z9|U7T3Z9_FUSNUPyruvatekinaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00320PE=3SV=1	60.97194046774394	0.20551255781574032	3				NaN	NaN	0	NaN	2583	3350	5933
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5936	20.952	NaN	4229.7	30	0	411.79	0.106	+			17751	IEQGNTKAL	9	70	487.26991097016605	972.5252690071321	2	487.2690124511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IEQGNTKAL_	ENSG00000178896|ENST00000316052|EXOSC4	93.1432384553994	0.056003526918089595	3				NaN	NaN	0	NaN	2584	3350	5933
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5937	20.954	NaN	4068.5	30	0	452.67	0.106				-1	 	0	56	368.8701249384063	1103.588545415419	3	368.8697509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2585	3350	5933
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5938	20.956	NaN	2480.1	30	0	599.21	0.106	+			40409	STVGSAISR	9	50	439.23983545261007	NaN	0	439.23992919921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STVGSAISR_	ENSG00000101150|ENST00000346249|TPD52L2;nc|ENSG00000101150|O43399-2|TPD52L2;nc|ENSG00000101150|O43399-3|TPD52L2;nc|ENSG00000101150|O43399-4|TPD52L2;nc|ENSG00000101150|O43399-5|TPD52L2;nc|ENSG00000101150|O43399-6|TPD52L2;nc|ENSG00000101150|O43399-7|TPD52L2	109.47833844074708	0.010168233843482827	3				NaN	NaN	0	NaN	2586	3350	5933
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5939	20.958	NaN	4042.9	30	0	481.62	0.037	+			33055	REKETKALSL	10	68	587.84350276735	1173.6724526014998	2	587.8433227539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_REKETKALSL_	ENSG00000100345|ENST00000216181|MYH9;ENSG00000133026|ENST00000360416|MYH10;ENSG00000133392|ENST00000300036|MYH11;nc|ENSG00000100345|P35579-2|MYH9;nc|ENSG00000133026|P35580-2|MYH10;nc|ENSG00000133026|P35580-3|MYH10;nc|ENSG00000133026|P35580-5|MYH10;nc|ENSG00000133026|P35580|MYH10;nc|ENSG00000133392|P35749-2|MYH11;nc|ENSG00000133392|P35749-3|MYH11;nc|ENSG00000133392|P35749-4|MYH11;SYNDIG1-MYH9|1|fusion	86.88156770896713	0.14892753630261096	3				NaN	NaN	0	NaN	2587	3350	5933
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5940	20.958	NaN	1400.6	30	0	177.49	0.142	+			30527	QAIKESKIEL	10	56	579.8402958602697	1157.6660387873394	2	579.8402709960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QAIKESKIEL_	tr|U7SIU1|U7SIU1_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02231PE=4SV=1	36.446750945000026	0.5818864909973037	3				NaN	NaN	0	NaN	2588	3350	5933
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5949	20.98	NaN	25862	30	0	2877.7	0.214	+			14204	GSSDVIIHR	9	78	492.267407570286	982.5202622073721	2	492.266845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSSDVIIHR_	ENSG00000070047|ENST00000264555|PHRF1;ENST00000532550.1_1_11:601671-606691:+|nuORF;nc|ENSG00000070047|Q9P1Y6-2|PHRF1;nc|ENSG00000070047|Q9P1Y6-3|PHRF1;PHRF1|p.E1225Kfs*62|1|0.36|ENSG00000070047|chr11:609125-609125|G/-|frameshift_variant;PHRF1|p.L1393Cfs*8|1|0.38|ENSG00000070047|chr11:609628-609628|C/-|frameshift_variant;PHRF1|p.P938Qfs*23|2|0.45|ENSG00000070047|chr11:608263-608263|C/-|frameshift_variant;PHRF1|p.T1126Pfs*73|1|0.36|ENSG00000070047|chr11:608827-608827|C/-|frameshift_variant	139.97047562133406	0.010493916756945389	3				NaN	NaN	0	NaN	2594	3353	5948
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5950	20.983	NaN	5315.2	30	0	1682.4	0.106	+			5197	ATTQTIMQK	9	60	511.2709112365338	1020.5272695398676	2	511.2711486816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATTQTIMQK_	ENSG00000196584|ENST00000359321|XRCC2	114.8945686534367	0.024290463251177924	3				NaN	NaN	0	NaN	2595	3353	5948
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5951	20.985	NaN	6800.7	30	0	910.34	0.106	+			46736	VGQPRVSP	8	53	420.24065210330843	838.4667512734169	2	420.240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VGQPRVSP_	ENST00000461200.5_1_11:2337241-2339151:+|nuORF;ENST00000493924.5_1_11:2337619-2338684:+|nuORF	42.47446043378293	0.6409579893742323	3				NaN	NaN	0	NaN	2596	3353	5948
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5952	20.987	NaN	17516	30	0	8846.5	0.106				-1	 	0	33	328.5139498170448	982.5200200513345	3	328.5137939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2597	3353	5948
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5953	20.989	NaN	2771.9	30	0	314.79	0.106	+			35993	SEHRNLQNL	9	65	555.7867103782376	1109.558867823275	2	555.7871704101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SEHRNLQNL_	CLTC|p.A1374*|1|0.05|ENSG00000141367|chr17:59683464-59683465|-/TA|frameshift_variant;ENSG00000070371|ENST00000427926|CLTCL1;ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000070371|P53675-2|CLTCL1;nc|ENSG00000141367|Q00610-2|CLTC	85.16082228582465	0.07850854922700509	3				NaN	NaN	0	NaN	2598	3353	5948
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5954	20.991	NaN	5414.1	30	0	1138	0.038	+			8245	EAFREHQQY	9	64	604.2783875493766	1206.542222165553	2	604.2783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EAFREHQQY_	ENSG00000133106|ENST00000313624|EPSTI1;ENST00000535677.5_1_13:43491732-43537592:-|nuORF;EPSTI1|p.L289Sfs*24|1|0.42|ENSG00000133106|chr13:42895092-42895093|-/A|frameshift_variant;nc|ENSG00000133106|Q96J88-3|EPSTI1;nc|ENSG00000133106|Q96J88|EPSTI1	83.6470233535746	0.08277643980271215	3				NaN	NaN	0	NaN	2599	3353	5948
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5955	20.992	NaN	4251.7	30	0	688.92	0.142	+			2615	AQIENSAAVEK	11	73	580.3013876087797	1158.5882222843593	2	580.3014526367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AQIENSAAVEK_	ENSG00000162645|ENST00000370466|GBP2	136.80661076175005	0.0007621683046424921	3				NaN	NaN	0	NaN	2600	3353	5948
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5965	21.015	NaN	37843	30	0	6884.2	0.214	+			33935	RSAFTVIRK	9	77	359.8893244510105	1076.6461439532316	3	359.8889465332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RSAFTVIRK_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	120.27252224102466	0.02103478360410217	3				NaN	NaN	0	NaN	2607	3356	5964
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5966	21.019	NaN	12176	30	0	4888	0.106	+			42646	TAVIDHHNY	9	63	357.1737713046937	1068.499484514281	3	357.1734313964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAVIDHHNY_	ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656-2|DDOST;nc|ENSG00000244038|P39656-3|DDOST;nc|ENSG00000244038|P39656|DDOST	95.81516180277367	0.04847050768394289	3				NaN	NaN	0	NaN	2608	3356	5964
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5967	21.021	NaN	12598	30	0	1560.8	0.106	+			42647	TAVIDHHNY	9	70	535.2573998226924	1068.5002467121847	2	535.2568969726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TAVIDHHNY_	ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656-2|DDOST;nc|ENSG00000244038|P39656-3|DDOST;nc|ENSG00000244038|P39656|DDOST	150.36159442982594	0.006784847064083231	3				NaN	NaN	0	NaN	2609	3356	5964
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5968	21.023	NaN	14119	30	0	7590.8	0.106	+			33936	RSAFTVIRK	9	73	539.3305236180711	1076.646494302942	2	539.3303833007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RSAFTVIRK_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	52.167168403610894	0.27890951017331667	3				NaN	NaN	0	NaN	2610	3356	5964
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5969	21.024	NaN	3278.9	30	0	773.52	0.106	+			29070	NTIVLMMK	8	38	322.51049407954815	964.5096528388444	3	322.51019287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_NTIVLM(Oxidation (M))MK_	CACNA1A|p.P2221Rfs*45|1|0.48|ENSG00000141837|chr19:13208879-13208879|A/-|frameshift_variant;CACNA1A|p.Q1743Pfs*29|1|0.24|ENSG00000141837|chr19:13234944-13234945|-/A|frameshift_variant;ENSG00000141837|ENST00000360228|CACNA1A;nc|ENSG00000141837|O00555-2|CACNA1A;nc|ENSG00000141837|O00555-3|CACNA1A;nc|ENSG00000141837|O00555-4|CACNA1A;nc|ENSG00000141837|O00555-5|CACNA1A;nc|ENSG00000141837|O00555-6|CACNA1A	47.657333605630114	0.6087971902037268	3				NaN	NaN	0	NaN	2611	3356	5964
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5970	21.026	NaN	3909	30	0	282.3	0.106	+			35551	SAVSQSKEL	9	73	474.75466565140465	947.4947783696093	2	474.75433349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SAVSQSKEL_	ENSG00000136603|ENST00000259119|SKIL;ENST00000490894.1_1_3:170102333-170102591:+|nuORF;nc|ENSG00000136603|P12757-3|SKIL;nc|ENSG00000136603|P12757-5|SKIL	82.7504851949679	0.08565546331141553	3				NaN	NaN	0	NaN	2612	3356	5964
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5971	21.028	NaN	18050	30	0	6926.5	0.035				-1	VLVLLQCC	8	58	316.506917077503	946.4989218327089	3	316.5068054199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_VLVLLQC(Carbamidomethyl (C))C_	ENSG00000133048|ENST00000255409|CHI3L1	38.80614096846853	0.6637206697844082	3				NaN	NaN	0	NaN	2613	3356	5964
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5979	21.046	NaN	7295.3	30	0	3913.2	0.214				-1	 	0	61	384.77251356766465	767.5304742021293	2	384.77197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2618	3359	5978
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5980	21.05	NaN	1795.5	30	0	153.87	0.106	+			45404	TVVDAKTLK	9	62	487.7979028447946	973.5812527563892	2	487.7972412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVVDAKTLK_	ENSG00000079246|ENST00000392132|XRCC5;ENST00000493706.1_1_2:216990646-216992426:+|nuORF;XRCC5|p.E287Kfs*11|2|0.25|ENSG00000079246|chr2:216127589-216127589|A/-|frameshift_variant;XRCC5|p.Q488Rfs*29|1|0.06|ENSG00000079246|chr2:216141305-216141305|C/-|frameshift_variant	36.446750945000026	0.4619375763483977	3				NaN	NaN	0	NaN	2619	3359	5978
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5981	21.052	NaN	2536.9	30	0	458.19	0.106	+			16836	HPDTGISSKAM	11	63	572.2768252993225	1142.5390976654448	2	572.27685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HPDTGISSKAM_	ENSG00000124635|ENST00000339812|H2BC11;ENSG00000146047|ENST00000274764|H2BC1;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000196890|ENST00000693095|H2BC26;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000436555.1_1_1:228651947-228652295:-|nuORF;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;nc|ENSG00000203814|Q5QNW6-2|H2BC18	67.49366992349736	0.25663419177724	3				NaN	NaN	0	NaN	2620	3359	5978
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5982	21.054	NaN	1356.9	30	0	224.27	0.106	+			35325	SANELAVQK	9	49	480.2608947753906	NaN	0	480.2608947753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SANELAVQK_	ENSG00000145833|ENST00000452510|DDX46;nc|ENSG00000145833|Q7L014|DDX46	46.45678178249821	0.2311111838007999	3				NaN	NaN	0	NaN	2621	3359	5978
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5983	21.055	NaN	1381.4	30	0	136.99	0.106	+			29524	PEAGGPPIKK	10	60	497.2904226236815	992.566292314163	2	497.28997802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PEAGGPPIKK_	ENSG00000258315|ENST00000439424|C17orf49;ENST00000547709.1_1_17:6919595-6920637:+|nuORF;ENST00000549857.1_1_17:6919676-6920027:+|nuORF;nc|ENSG00000258315|Q8IXM2-2|BAP18;nc|ENSG00000258315|Q8IXM2-3|BAP18	49.536043120802724	0.461275219792494	3				NaN	NaN	0	NaN	2622	3359	5978
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5984	21.057	NaN	3709.7	30	0	1029.4	0.036				-1	SAQTSVCKR	9	43	346.1787066905274	1035.5142906717822	3	346.1783447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_SAQTSVC(Carbamidomethyl (C))KR_	ENST00000476558.7_1_10:32735108-32735258:+|nuORF	22.579656572578934	0.5922287541734749	3				NaN	NaN	0	NaN	2623	3359	5978
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5985	21.058	NaN	1655.9	30	0	328.06	0.14			+	-1	LDPHLRPM	8	45	518.7645615004752	1035.5145700677504	2	518.7645263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))LDPHLRPM(Oxidation (M))_	REV__ENST00000437071.5_1_22:27068919-27134146:+|nuORF	33.51558372728122	0.7005509609380386	3				NaN	NaN	0	NaN	2624	3359	5978
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5992	21.076	NaN	7657.6	30	0	4469.6	0.214	+			35374	SAPSRATAL	9	54	437.243189290055	872.47182564691	2	437.2431335449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAPSRATAL_	ENSG00000155729|ENST00000359878|KCTD18;nc|ENSG00000155729|Q6PI47-3|KCTD18	51.19269402634007	0.2889735674168909	3				NaN	NaN	0	NaN	2628	3362	5991
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5993	21.079	NaN	5891.5	30	0	3137.7	0.106				-1	RVQEAVESMVK	11	74	646.3377533451884	1290.6609537571767	2	646.3378295898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_RVQEAVESM(Oxidation (M))VK_	ENSG00000035141|ENST00000430566|FAM136A;ENST00000460307.1_1_2:70528513-70529143:-|nuORF;ENST00000498665.1_1_2:70527944-70529143:-|nuORF;nc|ENSG00000035141|Q96C01|FAM136A	55.721020083383095	0.36165090524447163	3				NaN	NaN	0	NaN	2629	3362	5991
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5994	21.081	NaN	5119.4	30	0	2065.3	0.106	+			14961	GTMTGMLYK	9	60	517.2384809466357	1032.4624089600713	2	517.2389526367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Oxidation (M)	_GTM(Oxidation (M))TGM(Oxidation (M))LYK_	ENSG00000178440|ENST00000651763|TIMM23B-AGAP6;ENSG00000204152|ENST00000651259|TIMM23B;ENSG00000265354|ENST00000580018|TIMM23;nc|ENSG00000204152|Q5SRD1-2|TIMM23B	98.62937762414208	0.04060045538121712	3				NaN	NaN	0	NaN	2630	3362	5991
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5995	21.083	NaN	6704.1	30	0	1043.6	0.106	+			35804	SEAPGQRAL	9	66	464.74574616638563	927.4769393995713	2	464.7458190917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SEAPGQRAL_	ENSG00000114867|ENST00000346169|EIF4G1;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;ENST00000460829.5_1_3:184046782-184052693:+|nuORF;ENST00000478291.1_1_3:184049262-184049734:+|nuORF;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1	54.776311868738084	0.25715957988447635	3				NaN	NaN	0	NaN	2631	3362	5991
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5996	21.085	NaN	3103.3	30	0	546.52	0.106	+			6010	AVMDNKNPTIK	11	69	615.8296393278376	1229.6447257224752	2	615.8299560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVMDNKNPTIK_	CKAP5|p.K1126Rfs*25|1|0.46|ENSG00000175216|chr11:46767609-46767609|T/-|frameshift_variant;CKAP5|p.V1971Lfs*42|1|0.03|ENSG00000175216|chr11:46744211-46744212|-/TTGAAAAAAAG|frameshift_variant;ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5	158.05992399176858	5.709081523094571E-05	3				NaN	NaN	0	NaN	2632	3362	5991
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5997	21.087	NaN	1340.2	30	0	179.09	0.106	+			2846	ASALGSSSYK	10	48	485.745432793465	NaN	0	485.7454833984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASALGSSSYK_	ENSG00000122965|ENST00000261741|RBM19;RBM19|p.F841Sfs*18|1|0.28|ENSG00000122965|chr12:113915007-113915007|G/-|frameshift_variant	80.45461616416974	0.09722466730825292	3				NaN	NaN	0	NaN	2633	3362	5991
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5998	21.088	NaN	3625.7	30	0	2106.8	0.034	+			7989	DTAAAPAARA	10	41	457.73818057799144	913.4618082227829	2	457.7383728027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DTAAAPAARA_	ENST00000376560.7_2_6:30524925-30525204:+|nuORF	26.69291269510374	0.6618461711292317	3				NaN	NaN	0	NaN	2634	3362	5991
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6005	21.106	NaN	10327	30	0	1758.1	0.214	+			3069	ASFQSTSVK	9	68	477.7485636285069	953.4825743238138	2	477.7479248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASFQSTSVK_	ENSG00000050405|ENST00000341247|LIMA1;nc|ENSG00000050405|Q9UHB6-2|LIMA1;nc|ENSG00000050405|Q9UHB6-3|LIMA1;nc|ENSG00000050405|Q9UHB6-4|LIMA1;nc|ENSG00000050405|Q9UHB6-5|LIMA1	131.115847015877	0.014647977962315902	3				NaN	NaN	0	NaN	2638	3365	6004
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6006	21.11	NaN	3274.6	30	0	418.19	0.106	+			44561	TTAQLQVQK	9	64	508.79083529241456	1015.5671176516291	2	508.7900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTAQLQVQK_	ENSG00000127603|ENST00000564288|MACF1;nc|ENSG00000127603|O94854|MACF1;nc|ENSG00000127603|Q9UPN3-2|MACF1;nc|ENSG00000127603|Q9UPN3-3|MACF1;nc|ENSG00000127603|Q9UPN3-4|MACF1;nc|ENSG00000127603|Q9UPN3-5|MACF1;nc|ENSG00000127603|Q9UPN3|MACF1	89.02883481214508	0.06760336634167786	3				NaN	NaN	0	NaN	2639	3365	6004
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6007	21.112	NaN	4088.8	30	0	2155.2	0.106			+	2008	AKLAGPTRE	9	53	471.7721661635847	941.5297793939694	2	471.77166748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AKLAGPTRE_	REV__ENST00000526559.5_1_11:64693057-64693198:+|nuORF	64.20726635412375	0.17854274437659667	3				NaN	NaN	0	NaN	2640	3365	6004
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6008	21.114	NaN	2383.2	30	0	217.92	0.106	+			27203	MEGKINKQL	9	64	530.7953264351843	1059.5760999371685	2	530.794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MEGKINKQL_	ENSG00000055044|ENST00000264279|NOP58;ENST00000472050.5_1_2:203130664-203149064:+|nuORF;ENST00000478941.1_1_2:203147084-203155055:+|nuORF;ENST00000488403.5_1_2:203130664-203149205:+|nuORF	101.45984612302182	0.0377122763612125	3				NaN	NaN	0	NaN	2641	3365	6004
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6009	21.115	NaN	1585.5	30	0	279.42	0.106	+			28491	NGPVSHSSL	9	44	449.22505487940225	896.4355568256045	2	449.2245178222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NGPVSHSSL_	ENSG00000122482|ENST00000337393|ZNF644;nc|ENSG00000122482|Q9H582-2|ZNF644;ZNF644|p.K1068Lfs*15|1|0.05|ENSG00000122482|chr1:90937971-90937972|-/GTAG|frameshift_variant;ZNF644|p.K193Nfs*16|1|0.42|ENSG00000122482|chr1:90940775-90940775|T/-|frameshift_variant	64.20726635412375	0.17854274437659667	3				NaN	NaN	0	NaN	2642	3365	6004
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6010	21.117	NaN	2939.6	30	0	405.5	0.106	+			48652	VTSQVSNLK	9	59	488.2772091258162	974.5398653184325	2	488.276123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTSQVSNLK_	ENSG00000132952|ENST00000255304|USPL1;nc|ENSG00000132952|Q5W0Q7-2|USPL1	91.26522074875469	0.06129826844580791	3				NaN	NaN	0	NaN	2643	3365	6004
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6011	21.119	NaN	3837.9	30	0	402.62	0.033	+			3735	ATAAVTAAVK	10	70	451.7693999906009	901.5242470480018	2	451.7691345214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATAAVTAAVK_	ENSG00000165476|ENST00000373758|REEP3;nc|ENSG00000165476|Q6NUK4-2|REEP3	83.6470233535746	0.16744595502813267	3				NaN	NaN	0	NaN	2644	3365	6004
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6019	21.137	NaN	31981	30	0	8622.1	0.214	+			37105	SISSGPIQK	9	62	458.7587384823926	915.5029240315852	2	458.7582702636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SISSGPIQK_	ENSG00000006611|ENST00000005226|USH1C;nc|ENSG00000006611|Q9Y6N9-2|USH1C;nc|ENSG00000006611|Q9Y6N9-3|USH1C;nc|ENSG00000006611|Q9Y6N9-4|USH1C;nc|ENSG00000006611|Q9Y6N9|USH1C	131.03138772384656	0.014687601201650916	3				NaN	NaN	0	NaN	2649	3368	6018
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6020	21.14	NaN	3181.6	30	0	796.97	0.106	+			20601	KGAKIVGFTS	10	60	504.29846411061	1006.58237528802	2	504.2973327636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KGAKIVGFTS_	tr|U7SGE1|U7SGE1_FUSNUFlavodoxinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02270PE=3SV=1	40.77816245573522	0.5419747034533848	3				NaN	NaN	0	NaN	2650	3368	6018
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6021	21.142	NaN	4036.7	30	0	2040.4	0.106				-1	VVRCWKML	8	38	364.53194431635336	1090.5740035492602	3	364.5317077636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_VVRC(Carbamidomethyl (C))WKML_	ENSG00000197859|ENST00000651351|ADAMTSL2	25.450171626174864	0.7628259754767981	3				NaN	NaN	0	NaN	2651	3368	6018
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6022	21.144	NaN	2033.5	30	0	320.45	0.106	+			15826	GVYTGKLSEK	10	57	541.2976995235118	1080.5808461138236	2	541.2973022460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GVYTGKLSEK_	ENST00000375743.8_1_1:16299537-16302484:-|nuORF	53.08895987439943	0.42869529153390606	3				NaN	NaN	0	NaN	2652	3368	6018
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6023	21.146	NaN	2012.3	30	0	169.3	0.106			+	24021	LEEETVKEA	9	59	524.2657480052035	1046.5169430772069	2	524.265869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LEEETVKEA_	REV__DNAI1|p.S258Ifs*17|1|0.34|ENSG00000122735|chr9:34493277-34493278|-/A|frameshift_variant;REV__ENSG00000122735|ENST00000242317|DNAI1	60.97194046774394	0.20551255781574032	3				NaN	NaN	0	NaN	2653	3368	6018
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6024	21.148	NaN	1028.5	30	0	160.29	0.106			+	26422	LTGAGLLQG	9	46	415.24311984085637	828.4716867485128	2	415.2423095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LTGAGLLQG_	REV__ENSG00000100359|ENST00000248929|SGSM3;REV__ENST00000478085.5_1_22:40800171-40802852:+|nuORF;REV__nc|ENSG00000100359|Q96HU1-2|SGSM3	51.33545320467046	0.2872990594074956	3				NaN	NaN	0	NaN	2654	3368	6018
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6025	21.15	NaN	2470.1	30	0	738.21	0.035				-1	ASTKKVVMK	9	35	336.5342646192831	NaN	0	336.5343933105469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_ASTKKVVM(Oxidation (M))K_	CFAP47|p.F1567Vfs*4|1|0.31|ENSG00000165164|chrX:36098829-36098830|-/G|frameshift_variant;CFAP47|p.H2345Afs*15|1|0.09|ENSG00000165164|chrX:36236809-36236810|-/A|frameshift_variant;CFAP47|p.K734Nfs*6|1|0.13|ENSG00000165164|chrX:35971909-35971909|A/-|frameshift_variant;CFAP47|p.P2326Tfs*34|1|0.26|ENSG00000165164|chrX:36236751-36236752|-/A|frameshift_variant;ENSG00000165164|ENST00000378653|CFAP47;nc|ENSG00000165164|Q6ZTR5-1|CFAP47;nc|ENSG00000165164|Q6ZTR5-2|CFAP47;nc|ENSG00000165164|Q6ZTR5-6|CFAP47	24.519189625965996	0.35377483217337163	3				NaN	NaN	0	NaN	2655	3368	6018
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6037	21.175	NaN	6424.6	30	0	1046.6	0.214	+			38739	SSLNHIVEK	9	67	513.7828472174023	1025.5511415016044	2	513.782958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSLNHIVEK_	ENSG00000143624|ENST00000318967|INTS3;ENST00000491790.1_1_1:153733326-153733395:+|nuORF;nc|ENSG00000143624|Q68E01-3|INTS3;nc|ENSG00000143624|Q68E01|INTS3	122.93914200107957	0.019420478173996256	3				NaN	NaN	0	NaN	2664	3371	6036
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6038	21.179	NaN	2646.5	30	0	777.48	0.106			+	30146	PSASARAL	8	48	386.7190793171274	NaN	0	386.7192077636719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PSASARAL_	REV__ASXL1|p.E705Sfs*20|1|0.46|ENSG00000171456|chr20:32434822-32434822|G/-|frameshift_variant;REV__ASXL1|p.G1376Vfs*74|1|0.09|ENSG00000171456|chr20:32436834-32436834|G/-|frameshift_variant;REV__ASXL1|p.S846Qfs*5|3|0.29|ENSG00000171456|chr20:32435242-32435243|-/C|frameshift_variant;REV__ENSG00000171456|ENST00000375687|ASXL1	39.252832667884924	1.7418937515398478	3				NaN	NaN	0	NaN	2665	3371	6036
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6039	21.181	NaN	3294.6	30	0	433.32	0.106	+			42620	TAVCHTDAY	9	62	519.2216638003223	1036.4287746674445	2	519.2215576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_TAVC(Carbamidomethyl (C))HTDAY_	ENSG00000197894|ENST00000296412|ADH5;ENST00000507102.5_2_4:100003111-100009857:-|nuORF;ENST00000508511.5_1_4:99997418-100009857:-|nuORF;ENST00000512621.5_1_4:99993722-100006301:-|nuORF	71.29570347882199	0.13518600952103718	3				NaN	NaN	0	NaN	2666	3371	6036
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6040	21.182	NaN	2000.5	30	0	410.25	0.106	+			8949	EEYRGRSL	8	53	505.2571001359241	1008.4996473386482	2	505.2567443847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EEYRGRSL_	ENSG00000175718|ENST00000424776|RBMXL3;ENSG00000175718|ENST00000424776|RBMXL3;ENSG00000175718|ENST00000424776|RBMXL3;RBMXL3|p.G692Afs*282|1|0.46|ENSG00000175718|chrX:115191512-115191512|G/-|frameshift_variant;RBMXL3|p.G692Afs*282|1|0.46|ENSG00000175718|chrX:115191512-115191512|G/-|frameshift_variant	44.116797842482775	0.6307669463330267	3				NaN	NaN	0	NaN	2667	3371	6036
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6041	21.184	NaN	3311.9	30	0	869.11	0.106	+			38968	SSRPELLQP	9	39	342.8576103273549	1025.5510015822647	3	342.8572998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSRPELLQP_	ENSG00000120820|ENST00000360814|GLT8D2	37.15910966729921	0.4535818937225704	3				NaN	NaN	0	NaN	2668	3371	6036
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6042	21.186	NaN	2859.9	30	0	437.58	0.035	+			46276	VEHKVETF	8	63	494.7589602548152	987.5033675764304	2	494.7592468261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VEHKVETF_	ENSG00000171863|ENST00000645674|RPS7;ENST00000444127.1_1_1:68708159-68708657:-|nuORF;ENST00000484240.1_1_17:44798950-44799232:-|nuORF	84.9155231211612	0.2928622555056503	3				NaN	NaN	0	NaN	2669	3371	6036
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6043	21.187	NaN	2645.9	30	0	619.89	0.142	+			43638	TIQSGEQPYK	10	58	575.7908201909776	1149.567087448755	2	575.7919311523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TIQSGEQPYK_	ENSG00000168653|ENST00000372969|NDUFS5	99.01295224348159	0.08062808246117298	3				NaN	NaN	0	NaN	2670	3371	6036
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6048	21.203	NaN	3037.9	30	0	717.69	0.214			+	9540	ELDSSAGGLI	10	61	481.24609632913985	960.4776397250797	2	481.2458190917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ELDSSAGGLI_	REV__ENSG00000158615|ENST00000367188|PPP1R15B	84.9155231211612	0.16018353804806162	3				NaN	NaN	0	NaN	2672	3374	6047
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6049	21.206	NaN	2757.4	30	0	379.92	0.106	+			23018	KVSQVIMEK	9	65	531.3053837428607	1060.5962145525214	2	531.3051147460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVSQVIMEK_	ENSG00000164985|ENST00000380733|PSIP1	80.45461616416974	0.09558281504443908	3				NaN	NaN	0	NaN	2673	3374	6047
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6050	21.208	NaN	2297.9	30	0	500.72	0.106			+	29731	PHPLHLIPQ	9	43	351.2067290382553	1050.598357714966	3	351.20648193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PHPLHLIPQ_	REV__BRD4|p.Q832H|1|0.15|ENSG00000141867|chr19:15244316-15244316|C/A|missense_variant	13.775330524044264	0.6112419832031292	3				NaN	NaN	0	NaN	2674	3374	6047
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6051	21.21	NaN	1745.4	30	0	472.25	0.106	+			16246	HEEKVFRAV	9	56	557.8038091889331	1113.593065444666	2	557.8329467773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HEEKVFRAV_	ENSG00000095139|ENST00000264028|ARCN1;nc|ENSG00000095139|P48444-2|ARCN1	37.50817390946774	0.44948750990682723	3				NaN	NaN	0	NaN	2675	3374	6047
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6052	21.212	NaN	1166.1	30	0	115.73	0.106			+	-1	CVDMFVKLP	9	49	554.7800689186291	1107.5455849040582	2	554.7799072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_C(Carbamidomethyl (C))VDMFVKLP_	REV__ENSG00000204480|ENST00000376101|PRAMEF19;REV__ENSG00000279804|ENST00000624297|PRAMEF18	34.172542307311794	0.4838870758800184	3				NaN	NaN	0	NaN	2676	3374	6047
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6053	21.214	NaN	1764.4	30	0	207.69	0.106	+			1177	AENKEIQKL	9	67	536.8036279489074	1071.5927029646148	2	536.8046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AENKEIQKL_	ENSG00000106541|ENST00000419304|AGR2	102.0615471778698	0.03709830720253279	3				NaN	NaN	0	NaN	2677	3374	6047
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6054	21.215	NaN	868.49	30	0	103.78	0.034	+			43808	TLNHFEAI	8	46	472.74399948579054	943.4734460383811	2	472.74273681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TLNHFEAI_	tr|U7SSR5|U7SSR5_FUSNUToprimdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01545PE=4SV=1	32.81241826257853	0.7059802730411993	3				NaN	NaN	0	NaN	2678	3374	6047
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6065	21.239	NaN	5721.3	30	0	1519.9	0.214	+			34037	RSLGWSFAE	9	63	526.7607924757613	1051.5070320183224	2	526.7606201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RSLGWSFAE_	ENST00000477081.1_1_17:59477759-59482423:+|nuORF	47.657333605630114	0.33044192980041115	3				NaN	NaN	0	NaN	2686	3377	6064
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6066	21.242	NaN	1408	30	0	240.42	0.106			+	38054	SPQYFSSY	8	46	489.7123858763504	977.4102188195009	2	489.7113037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SPQYFSSY_	REV__DMRT1|p.G259Afs*17|1|0.3|ENSG00000137090|chr9:894146-894146|G/-|frameshift_variant;REV__ENSG00000137090|ENST00000382276|DMRT1;REV__ENST00000564322.1_1_9:841703-894198:+|nuORF;REV__nc|ENSG00000137090|Q9Y5R6-2|DMRT1	45.9519527083369	0.6193794311207887	3				NaN	NaN	0	NaN	2687	3377	6064
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6067	21.244	NaN	2312.9	30	0	215.28	0.106	+			16247	HEEKVFRAV	9	66	557.8038091889331	1113.593065444666	2	557.8035888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HEEKVFRAV_	ENSG00000095139|ENST00000264028|ARCN1;nc|ENSG00000095139|P48444-2|ARCN1	66.96192283764107	0.15557981141143568	3				NaN	NaN	0	NaN	2688	3377	6064
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6068	21.246	NaN	1738.9	30	0	620.08	0.106			+	23701	LATLLLLHAA	10	34	345.8905250571002	1034.6497457715006	3	345.8898010253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LATLLLLHAA_	REV__ENSG00000253873|ENST00000398587|PCDHGA11;REV__nc|ENSG00000253873|Q9Y5H2-2|PCDHGA11;REV__nc|ENSG00000253873|Q9Y5H2-3|PCDHGA11;REV__PCDHGA11|p.N380Kfs*10|1|0.29|ENSG00000253873|chr5:141422362-141422363|-/A|frameshift_variant;REV__PCDHGA11|p.R724Afs*19|1|0.34|ENSG00000253873|chr5:141423397-141423397|C/-|frameshift_variant	37.81151784470057	0.569310847604193	3				NaN	NaN	0	NaN	2689	3377	6064
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6069	21.248	NaN	1522.7	30	0	205.11	0.034	+			42700	TDAHVAEEG	9	51	464.70330492775	NaN	0	464.702880859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TDAHVAEEG_	DNAH10|p.D3416Mfs*54|1|0.28|ENSG00000197653|chr12:123914871-123914871|C/-|frameshift_variant;DNAH10|p.N3499Ifs*2|1|0.14|ENSG00000197653|chr12:123916578-123916578|A/-|frameshift_variant;DNAH10|p.Q2965Kfs*11|1|0.57|ENSG00000197653|chr12:123894687-123894687|C/-|frameshift_variant;ENSG00000197653|ENST00000673944|DNAH10;nc|ENSG00000197653|Q8IVF4|DNAH10	37.15910966729921	0.2899585034171616	3				NaN	NaN	0	NaN	2690	3377	6064
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6077	21.266	NaN	1713.5	30	0	303.02	0.214	+			38168	SQCDSPYVTK	10	47	592.7667225369723	1183.5188921407446	2	592.7660522460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SQC(Carbamidomethyl (C))DSPYVTK_	ENSG00000102572|ENST00000539966|STK24;ENST00000481288.1_1_13:99161185-99171658:-|nuORF;nc|ENSG00000102572|Q9Y6E0|STK24	58.62960593111931	0.3783037861296717	3				NaN	NaN	0	NaN	2695	3380	6076
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6078	21.27	NaN	1946.1	30	0	271.21	0.106			+	44348	TSGTPTPLK	9	49	451.2531775789778	900.4918022247556	2	451.2532043457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TSGTPTPLK_	REV__ENSG00000038427|ENST00000265077|VCAN;REV__nc|ENSG00000038427|P13611-3|VCAN;REV__nc|ENSG00000038427|P13611-5|VCAN;REV__VCAN|p.E2431Rfs*10|1|0.16|ENSG00000038427|chr5:83540290-83540291|-/G|frameshift_variant	74.25504064058377	0.12238981753128622	3				NaN	NaN	0	NaN	2696	3380	6076
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6079	21.272	NaN	1330.8	30	0	153.45	0.106	+			20062	KEKEPEEEL	9	56	565.782789913069	1129.551026892938	2	565.783935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEKEPEEEL_	ENSG00000149781|ENST00000345728|FERMT3;FERMT3|p.R510Pfs*105|1|0.28|ENSG00000149781|chr11:64220634-64220635|-/C|frameshift_variant;nc|ENSG00000149781|Q86UX7|FERMT3	51.19269402634007	0.2889735674168909	3				NaN	NaN	0	NaN	2697	3380	6076
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6080	21.273	NaN	1279.6	30	0	221.93	0.106			+	3922	ATASLPGPNR	10	51	492.267407570286	982.5202622073721	2	492.2674255371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATASLPGPNR_	REV__CELSR1|p.G1602Vfs*104|1|0.17|ENSG00000075275|chr22:46410526-46410526|C/-|frameshift_variant;REV__CELSR1|p.G614Afs*54|3|0.27|ENSG00000075275|chr22:46535330-46535330|C/-|frameshift_variant;REV__CELSR1|p.I2650Sfs*5|1|0.42|ENSG00000075275|chr22:46369187-46369187|T/-|frameshift_variant;REV__CELSR1|p.R2275Qfs*18|1|0.18|ENSG00000075275|chr22:46384603-46384604|-/G|frameshift_variant;REV__CELSR1|p.T1849Rfs*8|2|0.25|ENSG00000075275|chr22:46397831-46397831|C/-|frameshift_variant;REV__ENSG00000075275|ENST00000674500|CELSR1;REV__nc|ENSG00000075275|Q9NYQ6-2|CELSR1;REV__nc|ENSG00000075275|Q9NYQ6|CELSR1	44.377184641726394	0.5088115166961078	3				NaN	NaN	0	NaN	2698	3380	6076
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6081	21.275	NaN	1037.5	30	0	168.36	0.106			+	7662	DKVDHADE	8	48	464.70330492775	NaN	0	464.2392578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DKVDHADE_	REV__ANKEF1|p.Y524Tfs*5|1|0.27|ENSG00000132623|chr20:10050138-10050141|TTAT/-|frameshift_variant;REV__ANKEF1|p.Y712Sfs*5|1|0.07|ENSG00000132623|chr20:10054561-10054562|-/CCTGGAA|frameshift_variant;REV__ENSG00000132623|ENST00000378392|ANKEF1	30.317721548370564	1.7418937515398478	3				NaN	NaN	0	NaN	2699	3380	6076
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6082	21.277	NaN	2408.4	30	0	1485.5	0.033			+	43373	TGETALPR	8	45	422.73009373431086	843.4456345354217	2	422.7302551269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TGETALPR_	REV__nc|ENSG00000166482|P55083-2|MFAP4	30.503639358989545	0.7238069182250283	3				NaN	NaN	0	NaN	2700	3380	6076
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6091	21.297	NaN	7206.9	30	0	2046.1	0.214	+			45992	VATSQLQK	8	63	437.75328017693937	873.4920074206788	2	437.75299072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VATSQLQK_	ENSG00000146414|ENST00000275233|SHPRH;ENST00000433355.6_1_6:146231577-146267398:-|nuORF;ENST00000519632.5_1_6:146239221-146248402:-|nuORF;nc|ENSG00000146414|Q149N8-4|SHPRH	71.29570347882199	0.39610197767395533	3				NaN	NaN	0	NaN	2706	3383	6090
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6092	21.301	NaN	7673.2	30	0	2546.8	0.106				-1	 	0	52	411.7218916094301	821.4292302856602	2	411.7211608886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2707	3383	6090
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6093	21.302	NaN	4377.2	30	0	937.31	0.106	+			32925	REAEETQSTL	10	64	582.2809299925	1162.5473070517999	2	582.280517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_REAEETQSTL_	ENSG00000125844|ENST00000377813|RRBP1;nc|ENSG00000125844|Q9P2E9-3|RRBP1	63.69406221917213	0.3322431690470481	3				NaN	NaN	0	NaN	2708	3383	6090
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6094	21.304	NaN	1406.4	30	0	160.17	0.106			+	25115	LLPTVFGIL	9	56	486.8077359257215	NaN	0	486.8077392578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LLPTVFGIL_	REV__ENSG00000147138|ENST00000645147|GPR174	50.0245360154114	0.20652386741182333	3				NaN	NaN	0	NaN	2709	3383	6090
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6095	21.306	NaN	1946.8	30	0	481.96	0.106	+			36377	SETGGYREE	9	58	514.2208087848795	1026.427064636559	2	514.2210693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SETGGYREE_	ENST00000355196.6_1_4:83821322-83821651:-|nuORF;ENST00000504869.1_1_4:83821360-83821651:-|nuORF	45.9519527083369	0.35044536499095585	3				NaN	NaN	0	NaN	2710	3383	6090
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6096	21.308	NaN	2790.4	30	0	346.78	0.037				-1	 	0	47	368.8701249384063	1103.588545415419	3	368.8699035644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2711	3383	6090
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6097	21.309	NaN	7599.6	30	0	1501.1	0.143	+			4126	ATEHLSTLSEK	11	69	608.3148337489326	1214.6151145646652	2	608.3147583007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATEHLSTLSEK_	ENSG00000118137|ENST00000236850|APOA1	139.38205640894643	0.0005577063719173977	3				NaN	NaN	0	NaN	2712	3383	6090
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6106	21.33	NaN	12872	30	0	2983.7	0.214	+			48408	VTIKEGSQLK	10	77	551.8271490120326	1101.639745090865	2	551.8272705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTIKEGSQLK_	ENSG00000100138|ENST00000401959|SNU13	128.3478880297481	0.01553957493207534	3				NaN	NaN	0	NaN	2718	3386	6105
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6107	21.334	NaN	5544	30	0	639.94	0.106			+	40451	STVPTRAFK	9	75	503.7862694130529	NaN	0	503.7845458984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STVPTRAFK_	REV__nc|ENSG00000274487|A6NEC2-2|NPEPPSL1;REV__nc|ENSG00000274487|A6NEC2|NPEPPSL1	76.7741389293348	0.08243745921263976	3				NaN	NaN	0	NaN	2719	3386	6105
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6108	21.336	NaN	2211.8	30	0	316.99	0.106	+			1047	AEKPKTVQL	9	58	507.303442708785	1012.59233248437	2	507.30303955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEKPKTVQL_	ENSG00000136813|ENST00000684092|ECPAS;nc|ENSG00000136813|Q5VYK3|ECPAS	82.7504851949679	0.08565546331141553	3				NaN	NaN	0	NaN	2720	3386	6105
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6109	21.337	NaN	1871.7	30	0	406.98	0.106	+			5055	ATSGVVAVR	9	50	430.25329254739086	858.4920321615817	2	430.2532043457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATSGVVAVR_	ENSG00000074054|ENST00000696935|CLASP1;nc|ENSG00000074054|Q7Z460-2|CLASP1;nc|ENSG00000074054|Q7Z460-3|CLASP1;nc|ENSG00000074054|Q7Z460-4|CLASP1;nc|ENSG00000074054|Q7Z460-5|CLASP1;nc|ENSG00000074054|Q7Z460|CLASP1	69.6276240434122	0.14239879520340665	3				NaN	NaN	0	NaN	2721	3386	6105
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6110	21.339	NaN	5326.4	30	0	874.86	0.106	+			41836	SVSTKLISK	9	64	481.7979487635324	961.5813445938649	2	481.7973937988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVSTKLISK_	ENSG00000157741|ENST00000473989|UBN2;UBN2|p.G1191Efs*28|1|0.17|ENSG00000157741|chr7:139284473-139284473|G/-|frameshift_variant	76.16968421966216	0.11411088698345859	3				NaN	NaN	0	NaN	2722	3386	6105
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6111	21.341	NaN	1275.2	30	0	487.98	0.037				-1	QICDTYNQK	9	46	585.2670233189641	1168.5194937047281	2	585.2669677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_QIC(Carbamidomethyl (C))DTYNQK_	ENSG00000165175|ENST00000614558|MID1IP1	45.97224482568171	0.3502073465782774	3				NaN	NaN	0	NaN	2723	3386	6105
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6112	21.342	NaN	3132.3	30	0	1021.8	0.14	+			1979	AKAIGYAT	8	50	397.7244537682484	793.4343546032968	2	397.7237548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AKAIGYAT_	ENSG00000275395|ENST00000616721|FCGBP;FCGBP-ACSS2|1|fusion;nc|ENSG00000275395|Q9Y6R7|FCGBP	60.97194046774394	0.49215940876911696	3				NaN	NaN	0	NaN	2724	3386	6105
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6124	21.369	NaN	3667.6	30	0	392.54	0.214	+			12611	GEIDGNKV	8	51	416.2143732601853	830.4141935871706	2	416.2137756347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEIDGNKV_	ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232319904-232323320:-|nuORF	58.78195531508484	0.5138399468736706	3				NaN	NaN	0	NaN	2733	3389	6123
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6125	21.372	NaN	6114.8	30	0	762.46	0.106	+			15908	HAANQSYQY	9	70	541.2388359065887	1080.4631188799774	2	541.2386474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HAANQSYQY_	ENSG00000130402|ENST00000252699|ACTN4;ENST00000588618.5_1_19:39138385-39212431:+|nuORF;nc|ENSG00000130402|O43707-2|ACTN4;nc|ENSG00000130402|O43707-3|ACTN4	93.1432384553994	0.056003526918089595	3				NaN	NaN	0	NaN	2734	3389	6123
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6126	21.374	NaN	3833.5	30	0	884.09	0.106			+	30265	PTDIIDRY	8	61	496.7553012425753	991.4960495519506	2	496.75506591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PTDIIDRY_	REV__BRWD1|p.A1391Rfs*13|1|0.54|ENSG00000185658|chr21:39210022-39210022|T/-|frameshift_variant;REV__BRWD1|p.M1415Nfs*7|1|0.21|ENSG00000185658|chr21:39206228-39206229|-/T|frameshift_variant;REV__BRWD1|p.R1901Kfs*6|1|0.34|ENSG00000185658|chr21:39197367-39197368|-/T|frameshift_variant;REV__ENSG00000146247|ENST00000275034|PHIP;REV__ENSG00000185658|ENST00000342449|BRWD1;REV__ENST00000473813.1_1_21:40581899-40585438:-|nuORF;REV__ENST00000479165.1_1_6:79650412-79665440:-|nuORF;REV__nc|ENSG00000185658|Q9NSI6-3|BRWD1;REV__nc|ENSG00000185658|Q9NSI6|BRWD1;REV__PHIP|p.R1463Gfs*3|1|0.3|ENSG00000146247|chr6:78946244-78946244|T/-|frameshift_variant	34.172542307311794	0.6954784234644539	3				NaN	NaN	0	NaN	2735	3389	6123
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6127	21.376	NaN	1799.1	30	0	279.14	0.106			+	50204	WLVCVPLR	8	55	493.28707409222	984.55959525124	2	493.2876892089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_WLVCVPLR_	REV__ENST00000455577.6_1_15:40531811-40531901:+|nuORF	28.2542754592877	0.7411748056684583	3				NaN	NaN	0	NaN	2736	3389	6123
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6128	21.378	NaN	1322	30	0	153.8	0.106			+	31699	QNLVQPIQE	9	61	534.7886555189483	1067.5627581046965	2	534.7889404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QNLVQPIQE_	REV__ENSG00000205339|ENST00000379719|IPO7	47.657333605630114	0.33044192980041115	3				NaN	NaN	0	NaN	2737	3389	6123
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6129	21.38	NaN	2815.1	30	0	488.37	0.036	+			3237	ASLDASSNVDK	11	64	553.770166372808	NaN	0	553.77001953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASLDASSNVDK_	ENSG00000165030|ENST00000297689|NFIL3	48.18798116849167	0.3283333270526623	3				NaN	NaN	0	NaN	2738	3389	6123
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6130	21.38	NaN	2281.4	30	0	1122	0.14			+	31811	QPPRSGGL	8	44	406.22503760863503	810.4355222840701	2	406.2241516113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QPPRSGGL_	REV__ENST00000526463.5_1_11:118881994-118885721:+|nuORF;REV__ENST00000532132.5_1_11:118881994-118886068:+|nuORF;REV__ENST00000580556.5_1_11:118881994-118885036:+|nuORF;REV__ENST00000583842.1_1_11:118881994-118882714:+|nuORF	24.20275056022122	0.7724576178584145	3				NaN	NaN	0	NaN	2739	3389	6123
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6137	21.398	NaN	3959.8	30	0	2001.7	0.214				-1	 	0	49	384.77251356766465	767.5304742021293	2	384.7718505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2743	3392	6136
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6138	21.402	NaN	2184.5	30	0	1143.9	0.106			+	-1	VYLLFGRCFCC	11	42	711.8217801809724	1421.6290074287447	2	711.8211059570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))VYLLFGRC(Carbamidomethyl (C))FCC_	REV__ENST00000460291.1_1_3:11383675-11389548:+|nuORF	20.94693142431847	0.7700749696703488	3				NaN	NaN	0	NaN	2744	3392	6136
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6139	21.404	NaN	1508.6	30	0	315.72	0.106	+			14456	GTAYIHGMK	9	55	489.2463394952029	NaN	0	489.2464599609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTAYIHGMK_	ENSG00000000419|ENST00000371588|DPM1;ENST00000466152.5_1_20:49557422-49575060:-|nuORF	34.172542307311794	0.30503706118289736	3				NaN	NaN	0	NaN	2745	3392	6136
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6140	21.406	NaN	3373.9	30	0	591.22	0.106			+	6984	CPYDGPLGRF	10	64	562.7644301529873	1123.5143073727745	2	562.7649536132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_CPYDGPLGRF_	REV__ENST00000356638.7_1_11:62407137-62407200:-|nuORF	56.72105179125745	0.3956618550748046	3				NaN	NaN	0	NaN	2746	3392	6136
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6141	21.407	NaN	2378.2	30	0	614.35	0.106	+			49235	VVNKVPLTGK	10	46	352.2258095115468	1053.6555991348405	3	352.225341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVNKVPLTGK_	ENSG00000151135|ENST00000280756|TMEM263	31.529811441608018	0.6223461015008678	3				NaN	NaN	0	NaN	2747	3392	6136
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6142	21.409	NaN	1448.9	30	0	157.51	0.106			+	528	ADAARRSGE	9	53	466.72914955102186	931.4437461688437	2	466.72833251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ADAARRSGE_	REV__ENSG00000173517|ENST00000682557|PEAK1;REV__PEAK1|p.F1319Lfs*11|1|0.37|ENSG00000173517|chr15:77133125-77133125|A/-|frameshift_variant;REV__PEAK1|p.N1433Tfs*19|1|0.1|ENSG00000173517|chr15:77115099-77115099|T/-|frameshift_variant	39.252832667884924	0.4290233611298554	3				NaN	NaN	0	NaN	2748	3392	6136
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6143	21.411	NaN	1221.1	30	0	157.86	0.035				-1	VCEPGCPPA	9	43	493.7076261452583	985.4006993573166	2	493.7066650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C)	_VC(Carbamidomethyl (C))EPGC(Carbamidomethyl (C))PPA_	ENSG00000196132|ENST00000328439|MYT1;nc|ENSG00000196132|Q01538-2|MYT1	25.450171626174864	0.5654022654467333	3				NaN	NaN	0	NaN	2749	3392	6136
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6154	21.435	NaN	7412.2	30	0	1255.8	0.214	+			4896	ATQGATEIVK	10	62	509.28253679353884	1016.5505206538777	2	509.28216552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATQGATEIVK_	ENSG00000104321|ENST00000262209|TRPA1;TRPA1|p.G505Rfs*7|1|0.38|ENSG00000104321|chr8:72055452-72055453|-/T|frameshift_variant;TRPA1|p.L1023Ffs*15|1|0.42|ENSG00000104321|chr8:72023894-72023895|-/A|frameshift_variant;TRPA1|p.N377Ifs*25|1|0.08|ENSG00000104321|chr8:72056981-72056982|-/AAACTAATTTTGTTTATTA|frameshift_variant;TRPA1|p.T673Hfs*23|1|0.45|ENSG00000104321|chr8:72046557-72046557|T/-|frameshift_variant;TRPA1|p.Y327*|1|0.36|ENSG00000104321|chr8:72059399-72059402|TAAA/-|frameshift_variant	171.33049012695201	0.003262457723401657	3				NaN	NaN	0	NaN	2757	3395	6153
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6155	21.438	NaN	4027.5	30	0	1531.7	0.106				-1	 	0	42	323.2017520778135	644.3889512224271	2	323.2013244628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2758	3395	6153
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6156	21.44	NaN	3438.5	30	0	2266	0.106			+	18981	IVSGSDVEH	9	48	471.7301641083103	941.4457752834206	2	471.72967529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IVSGSDVEH_	REV__tr|U7T0U1|U7T0U1_FUSNUDNA-directedRNApolymerasesubunitbeta'OS=FusobacteriumnucleatumCTI-5OX=1316586GN=rpoCPE=3SV=1	38.80614096846853	0.43426287593479557	3				NaN	NaN	0	NaN	2759	3395	6153
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6157	21.442	NaN	2144.1	30	0	309.4	0.106	+			8317	EAKFGARR	8	58	467.76406946771937	933.5135860022388	2	467.763427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EAKFGARR_	ENSG00000028839|ENST00000237264|TBPL1	31.954861631926434	0.7126016770032289	3				NaN	NaN	0	NaN	2760	3395	6153
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6158	21.444	NaN	2713.7	30	0	1291.9	0.106	+			8369	EALRQSVVPA	10	41	357.205222835025	1068.593839105275	3	357.20458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EALRQSVVPA_	ENSG00000089847|ENST00000318934|ANKRD24;nc|ENSG00000089847|Q8TF21-2|ANKRD24	19.996771675451527	0.7148376616046445	3				NaN	NaN	0	NaN	2761	3395	6153
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6159	21.446	NaN	1251.8	30	0	153.81	0.036			+	37465	SLKFSRLAR	9	36	359.8893244510105	1076.6461439532316	3	359.8890686035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLKFSRLAR_	REV__ENSG00000115677|ENST00000310931|HDLBP;REV__ENST00000487169.5_1_2:242169444-242174670:-|nuORF;REV__nc|ENSG00000115677|Q00341-2|HDLBP	20.83715455343099	0.6085133616046181	3				NaN	NaN	0	NaN	2762	3395	6153
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6160	21.446	NaN	1145.7	30	0	239.55	0.14			+	8670	EDTLEELGGA	10	51	517.2384809466357	1032.4624089600713	2	517.2384033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EDTLEELGGA_	REV__ENSG00000175602|ENST00000312579|CCDC85B	32.81241826257853	0.6118718159329168	3				NaN	NaN	0	NaN	2763	3395	6153
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6169	21.468	NaN	3575.7	30	0	359.05	0.214			+	16670	HIKQWTRH	8	62	553.3052280107916	1104.595903088383	2	553.3054809570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HIKQWTRH_	REV__EIF3A|p.S85Pfs*10|1|0.05|ENSG00000107581|chr10:119073565-119073566|-/GGTATGTGGG|frameshift_variant;REV__ENSG00000107581|ENST00000369144|EIF3A;REV__nc|ENSG00000107581|Q14152-2|EIF3A	42.396135135203025	0.6414440140393314	3				NaN	NaN	0	NaN	2769	3398	6168
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6170	21.472	NaN	4100.1	30	0	351.57	0.106	+			3363	ASNPATFQR	9	61	496.2513220009556	NaN	0	496.2511901855469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASNPATFQR_	nc|ENSG00000286140|P0CG12|DERPC	51.52775601994872	0.19616436856719055	3				NaN	NaN	0	NaN	2770	3398	6168
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6171	21.474	NaN	2217	30	0	338.22	0.106	+			5109	ATSPLHINK	9	50	490.7803075477574	979.5460621623148	2	490.7799377441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATSPLHINK_	ENSG00000089177|ENST00000354981|KIF16B;nc|ENSG00000089177|Q96L93-4|KIF16B;nc|ENSG00000089177|Q96L93-5|KIF16B;nc|ENSG00000089177|Q96L93-6|KIF16B	45.97224482568171	0.3502073465782774	3				NaN	NaN	0	NaN	2771	3398	6168
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6172	21.475	NaN	1515.9	30	0	320.75	0.106				-1	KTMRMRLC	8	54	548.284890029556	1094.5552271259119	2	548.2842407226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_KTMRMRLC(Carbamidomethyl (C))_	ENSG00000104067|ENST00000614355|TJP1;nc|ENSG00000104067|Q07157-2|TJP1;nc|ENSG00000104067|Q07157|TJP1	40.77816245573522	0.6514838689002179	3				NaN	NaN	0	NaN	2772	3398	6168
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6173	21.477	NaN	1365.5	30	0	488.21	0.106	+			13563	GLSTTPRPA	9	42	450.2509641751643	898.4873754171286	2	450.2502136230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GLSTTPRPA_	ENST00000216129.6_1_22:43563724-43563883:-|nuORF	27.882242232435846	0.5426732730940306	3				NaN	NaN	0	NaN	2773	3398	6168
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6174	21.479	NaN	1537	30	0	166.03	0.034			+	-1	CLCPAPLVG	9	48	465.2307578438423	NaN	0	465.2299499511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_CLC(Carbamidomethyl (C))PAPLVG_	REV__ENST00000339142.6_2_17:77020254-77040169:+|nuORF	39.021493756699265	0.2805557132942146	3				NaN	NaN	0	NaN	2774	3398	6168
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6175	21.48	NaN	2359	30	0	635.49	0.143	+			45205	TVNPVAIHK	9	42	326.8627849225346	977.5665253678039	3	326.86260986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TVNPVAIHK_	ENSG00000074047|ENST00000361492|GLI2;ENST00000438299.5_1_2:121728002-121748192:+|nuORF;ENST00000452692.5_1_2:121728002-121748192:+|nuORF;GLI2|p.R1387Lfs*143|1|0.1|ENSG00000074047|chr2:120990074-120990074|G/-|frameshift_variant;nc|ENSG00000074047|P10070-1|GLI2;nc|ENSG00000074047|P10070-2|GLI2;nc|ENSG00000074047|P10070-3|GLI2;nc|ENSG00000074047|P10070-4|GLI2;nc|ENSG00000074047|P10070|GLI2	42.86426827375447	0.38666266728046506	3				NaN	NaN	0	NaN	2775	3398	6168
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6181	21.496	NaN	5457.9	30	0	2900.1	0.214			+	-1	VAMLVLIVN	9	38	329.8697360614858	986.5873787846574	3	329.86962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_VAM(Oxidation (M))LVLIVN_	REV__TMCC2|p.A652V|1|0.18|ENSG00000133069|chr1:205271949-205271949|C/T|missense_variant	21.9598887501803	0.5980208138527809	3				NaN	NaN	0	NaN	2778	3401	6180
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6182	21.499	NaN	2824.7	30	0	407.95	0.106			+	22605	KTTKQAAFL	9	58	504.2967107214616	1006.5788685097232	2	504.29705810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTTKQAAFL_	REV__tr|U7SWV5|U7SWV5_FUSNUBD-FAE-likedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01186PE=4SV=1	44.116797842482775	0.37197099687881774	3				NaN	NaN	0	NaN	2779	3401	6180
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6183	21.501	NaN	8412.3	30	0	3054.3	0.106	+			2019	AKNFIGKAIR	10	57	373.2334051603709	1116.6783860813127	3	373.23272705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AKNFIGKAIR_	ENST00000463670.5_1_1:156252735-156254976:+|nuORF	27.882242232435846	0.6521336255503853	3				NaN	NaN	0	NaN	2780	3401	6180
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6184	21.503	NaN	1505.4	30	0	108.59	0.106	+			26225	LSSLKGGR	8	48	409.2485295475118	816.4825061618236	2	409.2475891113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSSLKGGR_	ENST00000527368.5_1_11:66529588-66529918:+|nuORF	82.30502934623384	0.30436709589983096	3				NaN	NaN	0	NaN	2781	3401	6180
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6185	21.505	NaN	914.24	30	0	88.737	0.106	+			29364	PADLSRPK	8	48	442.25390387543115	882.4932548176623	2	442.2537536621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PADLSRPK_	ENSG00000047849|ENST00000683076|MAP4;MAP4|p.R919Gfs*14|1|0.44|ENSG00000047849|chr3:47870917-47870917|G/-|frameshift_variant;MAP4|p.T960Qfs*35|1|0.3|ENSG00000047849|chr3:47869309-47869309|T/-|frameshift_variant;MAP4|p.V999*|1|0.25|ENSG00000047849|chr3:47867318-47867318|T/-|frameshift_variant;nc|ENSG00000047849|P27816-2|MAP4;nc|ENSG00000047849|P27816-4|MAP4;nc|ENSG00000047849|P27816-5|MAP4;nc|ENSG00000047849|P27816-6|MAP4;nc|ENSG00000047849|P27816|MAP4	51.33545320467046	0.5859736979383976	3				NaN	NaN	0	NaN	2782	3401	6180
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6186	21.507	NaN	960.49	30	0	136.02	0.106				-1	YLPFRNCPR	9	37	611.8122627543828	NaN	0	611.8119506835938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_YLPFRNC(Carbamidomethyl (C))PR_	ENSG00000014257|ENST00000336375|ACP3;nc|ENSG00000014257|P15309-2|ACP3	18.324413293986947	0.3749620627292244	3				NaN	NaN	0	NaN	2783	3401	6180
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6187	21.508	NaN	1314.5	30	0	123.3	0.04			+	-1	RMGANMVFCFE	11	50	689.2930837452453	1376.5716145572906	2	689.2919311523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C),Oxidation (M)	_RMGANM(Oxidation (M))VFC(Carbamidomethyl (C))FE_	REV__ENSG00000107679|ENST00000368990|PLEKHA1;REV__nc|ENSG00000107679|Q9HB21-2|PLEKHA1	23.52269567125451	0.7430573033454468	3				NaN	NaN	0	NaN	2784	3401	6180
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6195	21.527	NaN	2038.5	30	0	346.15	0.214	+			48095	VSTGHATAL	9	52	428.73008169576076	NaN	0	428.730224609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSTGHATAL_	ENSG00000145113|ENST00000463781|MUC4;MUC4|p.L3985Ffs*274|1|0.3|ENSG00000145113|chr3:195779627-195779627|G/-|frameshift_variant;MUC4|p.N4902Tfs*8|1|0.37|ENSG00000145113|chr3:195761027-195761027|T/-|frameshift_variant;nc|ENSG00000145113|Q99102-10|MUC4;nc|ENSG00000145113|Q99102-11|MUC4;nc|ENSG00000145113|Q99102-15|MUC4;nc|ENSG00000145113|Q99102-16|MUC4;nc|ENSG00000145113|Q99102-17|MUC4;nc|ENSG00000145113|Q99102-2|MUC4;nc|ENSG00000145113|Q99102-3|MUC4;nc|ENSG00000145113|Q99102-5|MUC4;nc|ENSG00000145113|Q99102-7|MUC4;nc|ENSG00000145113|Q99102-8|MUC4;nc|ENSG00000145113|Q99102-9|MUC4	53.351449002276354	0.18359631779194618	3				NaN	NaN	0	NaN	2789	3404	6194
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6196	21.53	NaN	1575.6	30	0	331.4	0.106			+	6116	AVNRLPPNK	9	32	336.8685734922495	NaN	0	336.5344543457031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVNRLPPNK_	REV__ENSG00000104447|ENST00000395715|TRPS1;REV__nc|ENSG00000104447|Q9UHF7-3|TRPS1;REV__nc|ENSG00000104447|Q9UHF7|TRPS1;REV__TRPS1|p.N1193Mfs*5|1|0.3|ENSG00000104447|chr8:115414291-115414291|T/-|frameshift_variant;REV__TRPS1|p.N1276Kfs*5|1|0.21|ENSG00000104447|chr8:115414041-115414042|-/T|frameshift_variant;REV__TRPS1|p.T237Afs*9|1|0.11|ENSG00000104447|chr8:115619351-115619352|-/TTTTCTGGTGTGCTGCA|frameshift_variant	19.1035232394073	0.3723251548669699	3				NaN	NaN	0	NaN	2790	3404	6194
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6197	21.532	NaN	5022.8	30	0	1536.4	0.106	+			37247	SKTTRKGKEKS	11	50	417.24372502604473	NaN	0	417.24310302734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SKTTRKGKEKS_	ADGB|p.K1379Rfs*12|1|0.29|ENSG00000118492|chr6:146784714-146784714|A/-|frameshift_variant;ENSG00000118492|ENST00000397944|ADGB;nc|ENSG00000118492|Q8N7X0-2|ADGB	66.9202029811203	0.16638076873265448	3				NaN	NaN	0	NaN	2791	3404	6194
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6198	21.534	NaN	1240.4	30	0	90.535	0.106	+			16993	HPSLNAAM	8	49	420.70574629946907	839.3969396657382	2	420.705322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HPSLNAAM_	ENSG00000196208|ENST00000381486|GREB1;GREB1|p.K311Nfs*65|1|0.16|ENSG00000196208|chr2:11585181-11585181|C/-|frameshift_variant;nc|ENSG00000196208|Q4ZG55-2|GREB1;nc|ENSG00000196208|Q4ZG55-3|GREB1	50.0245360154114	0.5941082100236891	3				NaN	NaN	0	NaN	2792	3404	6194
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6199	21.536	NaN	1243.4	30	0	246.79	0.106				-1	SASGCSSWLA	10	47	513.2219921102916	NaN	0	513.2222900390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_SASGC(Carbamidomethyl (C))SSWLA_	ENST00000264607.8_1_2:239353020-239353245:+|nuORF	21.9598887501803	0.4201028297492154	3				NaN	NaN	0	NaN	2793	3404	6194
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6200	21.538	NaN	1910.3	30	0	168.04	0.035				-1	FLIWPPCV	8	63	516.2729582479691	NaN	0	516.2748413085938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_FLIWPPC(Carbamidomethyl (C))V_	ENSG00000197461|ENST00000402802|PDGFA;ENST00000482462.1_1_7:540672-552294:-|nuORF;nc|ENSG00000197461|P04085|PDGFA;PDGFA|p.A115T|1|0.29|ENSG00000197461|chr7:510919-510919|C/T|missense_variant	33.49298260027079	1.7418937515398478	3				NaN	NaN	0	NaN	2794	3404	6194
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6201	21.538	NaN	1268.6	30	0	312.53	0.145			+	-1	ADKVMQVKRL	10	40	401.90042471778276	1202.6794447535483	3	401.89984130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_ADKVM(Oxidation (M))QVKRL_	REV__ENSG00000157119|ENST00000287777|KLHL40;REV__nc|ENSG00000157119|Q2TBA0-2|KLHL40	21.68575002086885	0.7027366847906487	3				NaN	NaN	0	NaN	2795	3404	6194
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6208	21.558	NaN	3634	30	0	851.82	0.214	+			36881	SIGNLTQLQ	9	60	487.27045781541193	972.5263626976239	2	487.27001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIGNLTQLQ_	ENSG00000148356|ENST00000300417|LRSAM1;nc|ENSG00000148356|Q6UWE0-2|LRSAM1	95.81516180277367	0.04847050768394289	3				NaN	NaN	0	NaN	2799	3407	6207
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6209	21.561	NaN	1890.7	30	0	182.43	0.106				-1	LGQLMAAKR	9	67	515.2950084881472	1028.5754640430944	2	515.2945556640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LGQLMAAKR_	ENST00000396953.6_2_3:12882352-12882397:-|nuORF	51.33545320467046	0.2872990594074956	3				NaN	NaN	0	NaN	2800	3407	6207
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6210	21.563	NaN	5752.5	30	0	3173.2	0.106			+	45126	TVKKQKDK	8	43	325.5383245847213	973.5931443543639	3	325.5380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVKKQKDK_	REV__ENSG00000278053|ENST00000617633|DDX52	51.33545320467046	0.5859736979383976	3				NaN	NaN	0	NaN	2801	3407	6207
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6211	21.565	NaN	1157.7	30	0	120.46	0.106	+			48148	VSYFSPKEL	9	51	535.2803724909988	1068.5461920487976	2	535.3043823242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSYFSPKEL_	ENSG00000062370|ENST00000354340|ZNF112;nc|ENSG00000062370|Q9UJU3|ZNF112	40.77816245573522	0.41113185337114944	3				NaN	NaN	0	NaN	2802	3407	6207
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6212	21.567	NaN	957.87	30	0	128.69	0.036			+	30542	QAKPTPPLRT	10	42	554.8284912109375	NaN	0	554.8284912109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QAKPTPPLRT_	REV__ENSG00000006210|ENST00000006053|CX3CL1	23.52269567125451	0.42010282974921537	3				NaN	NaN	0	NaN	2803	3407	6207
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6218	21.582	NaN	4321.8	30	0	369.98	0.214	+			8904	EEVAQQKSL	9	66	516.2729582479691	NaN	0	516.2733764648438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EEVAQQKSL_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	141.52041321563706	0.0008657969365567067	3				NaN	NaN	0	NaN	2806	3410	6217
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6219	21.585	NaN	2612.4	30	0	961.55	0.106	+			45974	VATEGSREL	9	61	481.2512270074136	960.4879010816272	2	481.251708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VATEGSREL_	ENSG00000108771|ENST00000251642|DHX58;ENST00000586522.5_1_17:40255624-40263910:-|nuORF	53.08895987439943	0.27122541748218487	3				NaN	NaN	0	NaN	2807	3410	6217
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6220	21.587	NaN	2330.3	30	0	447.59	0.106	+			46397	VEMHHEAL	8	55	483.22917934552663	NaN	0	483.2293701171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VEMHHEAL_	ENSG00000101210|ENST00000217182|EEF1A2;ENSG00000156508|ENST00000309268|EEF1A1;ENST00000395772.3_1_X:97645409-97645481:+|nuORF;ENST00000436459.2_1_9:135895553-135896258:+|nuORF;ENST00000447052.1_1_21:24762753-24763314:+|nuORF;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	47.91560031466742	1.7418937515398478	3				NaN	NaN	0	NaN	2808	3410	6217
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6221	21.589	NaN	8182.2	30	0	1021.1	0.106	+			6201	AVQRTLLEK	9	74	529.3217251723231	1056.6288974114461	2	529.3232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVQRTLLEK_	ENSG00000002586|ENST00000381192|CD99;ENST00000381177.6_1_X:2656215-2658842:+|nuORF;nc|ENSG00000292348|P14209-3|CD99	117.5257442709337	0.022697614825424036	3				NaN	NaN	0	NaN	2809	3410	6217
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6222	21.591	NaN	3635.6	30	0	415.75	0.106	+			17689	IEKVEHSDL	9	70	535.2803724909988	1068.5461920487976	2	535.2808227539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IEKVEHSDL_	B2M|p.Y98Lfs*5|1|0.08|ENSG00000166710|chr15:44715648-44715648|A/-|frameshift_variant;ENSG00000166710|ENST00000648006|B2M;ENST00000559720.5_1_15:45003705-45007919:+|nuORF	81.52500206392136	0.09095445986635249	3				NaN	NaN	0	NaN	2810	3410	6217
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6223	21.593	NaN	1442.9	30	0	168.01	0.106	+			28696	NNAPVQILQ	9	55	498.7775056827564	NaN	0	498.7777099609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NNAPVQILQ_	ENSG00000151445|ENST00000557658|VIPAS39;nc|ENSG00000151445|Q9H9C1-2|VIPAS39	42.396135135203025	0.2590952873412954	3				NaN	NaN	0	NaN	2811	3410	6217
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6224	21.594	NaN	1732.8	30	0	204.33	0.037			+	-1	LLMLFMIVL	9	43	370.2206826640875	NaN	0	370.22064208984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_LLMLFM(Oxidation (M))IVL_	REV__ENSG00000111319|ENST00000228916|SCNN1A;REV__nc|ENSG00000111319|P37088-2|SCNN1A;REV__nc|ENSG00000111319|P37088-4|SCNN1A;REV__nc|ENSG00000111319|P37088-5|SCNN1A;REV__nc|ENSG00000111319|P37088-6|SCNN1A	29.14955571784316	0.3303970763161698	3				NaN	NaN	0	NaN	2812	3410	6217
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6235	21.618	NaN	89679	30	0	16847	0.214	+			15226	GTSSVIVSR	9	74	453.25636783659627	904.4981827399926	2	453.25579833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTSSVIVSR_	ENSG00000072803|ENST00000517395|FBXW11;nc|ENSG00000072803|Q9UKB1-2|FBXW11;nc|ENSG00000072803|Q9UKB1-3|FBXW11;nc|ENSG00000072803|Q9UKB1|FBXW11	150.36159442982594	0.006784847064083231	3				NaN	NaN	0	NaN	2820	3413	6234
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6236	21.622	NaN	1941.7	30	0	202.49	0.106	+			3888	ATAQFKINK	9	60	510.79597316289994	1019.5773933925999	2	510.79583740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATAQFKINK_	ENSG00000143228|ENST00000271452|NUF2;NUF2|p.I401Nfs*2|1|0.3|ENSG00000143228|chr1:163349015-163349016|-/A|frameshift_variant	67.49366992349736	0.1516260258713357	3				NaN	NaN	0	NaN	2821	3413	6234
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6237	21.623	NaN	3555.3	30	0	855.68	0.106				-1	VDHMASPL	8	66	443.210662906739	884.406772880278	2	443.2101135253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_VDHM(Oxidation (M))ASPL_	ENSG00000109794|ENST00000706927|FAM149A;ENST00000515078.5_1_4:187070333-187088439:+|nuORF;nc|ENSG00000109794|A5PLN7-2|FAM149A;nc|ENSG00000109794|A5PLN7-4|FAM149A;nc|ENSG00000109794|A5PLN7|FAM149A	33.51558372728122	0.7005509609380386	3				NaN	NaN	0	NaN	2822	3413	6234
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6238	21.625	NaN	10837	30	0	6709.7	0.106				-1	QLAEMLPGVLQ	11	55	405.5530200433417	1213.6372307302252	3	405.55230712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_QLAEM(Oxidation (M))LPGVLQ_	ENSG00000104419|ENST00000323851|NDRG1;ENST00000518010.5_1_8:134269105-134296554:-|nuORF;nc|ENSG00000104419|Q92597-2|NDRG1;nc|ENSG00000104419|Q92597-3|NDRG1	37.50817390946774	0.5920388381045607	3				NaN	NaN	0	NaN	2823	3413	6234
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6239	21.627	NaN	1255.7	30	0	246.08	0.106			+	1573	AGHLGPASR	9	49	433.2343444824219	NaN	0	433.2343444824219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AGHLGPASR_	REV__ENST00000484382.5_1_2:101014515-101023152:-|nuORF	50.0245360154114	0.20652386741182333	3				NaN	NaN	0	NaN	2824	3413	6234
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6240	21.629	NaN	1942.5	30	0	319.82	0.106			+	47641	VSASVLNLN	9	49	458.7588731863186	915.5031934394373	2	458.7581481933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VSASVLNLN_	REV__ENST00000323571.8_1_17:38435382-38435439:+|nuORF	51.33545320467046	0.2872990594074956	3				NaN	NaN	0	NaN	2825	3413	6234
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6241	21.631	NaN	1374.2	30	0	103.44	0.036				-1	EATPLRVMY	9	53	548.280399353364	NaN	0	548.2770385742188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_EATPLRVM(Oxidation (M))Y_	ENSG00000130589|ENST00000467148|HELZ2;HELZ2|p.G2213Vfs*22|1|0.14|ENSG00000130589|chr20:63561876-63561876|C/-|frameshift_variant;HELZ2|p.P1310Rfs*32|1|0.09|ENSG00000130589|chr20:63564893-63564893|G/-|frameshift_variant;HELZ2|p.R2206Vfs*29|2|0.28|ENSG00000130589|chr20:63561898-63561898|G/-|frameshift_variant;nc|ENSG00000130589|Q9BYK8-2|HELZ2;nc|ENSG00000130589|Q9BYK8|HELZ2	51.33545320467046	0.19748963086191895	3				NaN	NaN	0	NaN	2826	3413	6234
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6250	21.65	NaN	6627.2	30	0	1824.3	0.215	+			34474	RVASIVDAG	9	58	444.25083594004644	886.4871189468929	2	444.2505187988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVASIVDAG_	ENST00000368366.5_1_1:155217575-155221373:-|nuORF	54.776311868738084	0.25715957988447635	3				NaN	NaN	0	NaN	2832	3416	6249
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6251	21.654	NaN	2343.7	30	0	551.74	0.106	+			31592	QLSVCSHYV	9	59	518.2515780439096	1034.488603154619	2	518.2510375976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QLSVCSHYV_	nc|ENSG00000176406|Q9UQ26-5|RIMS2	51.33545320467046	0.2872990594074956	3				NaN	NaN	0	NaN	2833	3416	6249
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6252	21.656	NaN	743.18	30	0	86.704	0.106			+	25031	LLHALFLCL	9	49	521.8104532664933	1041.6063535997864	2	521.8104858398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LLHALFLCL_	REV__ADGRE2|p.I749Rfs*49|1|0.1|ENSG00000127507|chr19:14743716-14743722|TGCAAGA/-|frameshift_variant;REV__ENSG00000127507|ENST00000315576|ADGRE2;REV__ENSG00000131355|ENST00000253673|ADGRE3;REV__nc|ENSG00000127507|Q9UHX3-2|ADGRE2;REV__nc|ENSG00000127507|Q9UHX3-3|ADGRE2;REV__nc|ENSG00000127507|Q9UHX3-4|ADGRE2;REV__nc|ENSG00000127507|Q9UHX3-5|ADGRE2;REV__nc|ENSG00000127507|Q9UHX3-6|ADGRE2;REV__nc|ENSG00000131355|Q9BY15-2|ADGRE3;REV__nc|ENSG00000268758|Q86SQ3|ADGRE4P	21.70233525837049	0.6004277881119521	3				NaN	NaN	0	NaN	2834	3416	6249
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6253	21.657	NaN	4848.1	30	0	2376.7	0.106	+			6202	AVQRTLLEK	9	45	353.2170623249004	1056.6293575749012	3	353.2166442871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVQRTLLEK_	ENSG00000002586|ENST00000381192|CD99;ENST00000381177.6_1_X:2656215-2658842:+|nuORF;nc|ENSG00000292348|P14209-3|CD99	34.172542307311794	0.4838870758800184	3				NaN	NaN	0	NaN	2835	3416	6249
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6254	21.659	NaN	1807.5	30	0	173.95	0.106			+	26528	LTQPADKIA	9	61	478.77355466424393	955.5325563952879	2	478.77294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LTQPADKIA_	REV__tr|U7SNJ0|U7SNJ0_FUSNUPhosphoglucosaminemutaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=glmMPE=3SV=1	60.11826168202944	0.21262886028301267	3				NaN	NaN	0	NaN	2836	3416	6249
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6255	21.661	NaN	2074.9	30	0	921.29	0.036			+	42493	TANLQVPAKQ	10	38	357.205222835025	1068.593839105275	3	357.53875732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TANLQVPAKQ_	REV__ENST00000403263.5_1_2:206863772-206864039:-|nuORF	20.94693142431847	0.7087701759873708	3				NaN	NaN	0	NaN	2837	3416	6249
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6256	21.662	NaN	2939.6	30	0	1161.9	0.139				-1	RMCTPIFP	8	59	490.7381199500727	979.4616869669454	2	490.738525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_RM(Oxidation (M))CTPIFP_	ENST00000542192.5_1_9:136334778-136334895:+|nuORF	28.2542754592877	0.7411748056684583	3				NaN	NaN	0	NaN	2838	3416	6249
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6267	21.688	NaN	9443.6	30	0	1095.6	0.214	+			7120	DAAKNQVAM	9	71	474.23462460188966	946.4546962705793	2	474.23394775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DAAKNQVAM_	ENSG00000109971|ENST00000534624|HSPA8;ENSG00000126803|ENST00000247207|HSPA2;ENSG00000204390|ENST00000375654|HSPA1L;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000531063.1_1_11:122931759-122932032:-|nuORF;ENST00000532167.5_1_11:122930938-122932032:-|nuORF;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;ENST00000533238.5_1_11:122929516-122932032:-|nuORF;HSPA2|p.G138Afs*8|3|0.33|ENSG00000126803|chr14:64541257-64541257|G/-|frameshift_variant;HSPA8|p.K569Dfs*6|1|0.3|ENSG00000109971|chr11:123058302-123058303|TC/-|frameshift_variant;nc|ENSG00000109971|P11142-2|HSPA8	107.00750918261382	0.032051501805654005	3				NaN	NaN	0	NaN	2846	3419	6266
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6268	21.692	NaN	6749.7	30	0	868.33	0.106			+	37721	SLSVSVGRVK	10	69	516.3141796344336	1030.613806335667	2	516.3140258789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLSVSVGRVK_	REV__ENSG00000126259|ENST00000360202|KIRREL2;REV__nc|ENSG00000126259|Q6UWL6-5|KIRREL2	70.39856735676683	0.27406383984062843	3				NaN	NaN	0	NaN	2847	3419	6266
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6269	21.694	NaN	4740.9	30	0	1445.9	0.106	+			39156	SSVRTKLIQ	9	42	344.5450980532363	NaN	0	344.5450439453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSVRTKLIQ_	ENSG00000142207|ENST00000382751|URB1	46.45678178249821	0.2311111838007999	3				NaN	NaN	0	NaN	2848	3419	6266
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6270	21.696	NaN	1762.7	30	0	284.33	0.106			+	37506	SLLGAGYAKV	10	53	489.7845988868953	NaN	0	489.78460693359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLLGAGYAKV_	REV__ENSG00000180176|ENST00000352909|TH;REV__nc|ENSG00000180176|P07101-2|TH;REV__nc|ENSG00000180176|P07101-4|TH;REV__nc|ENSG00000180176|P07101-5|TH;REV__nc|ENSG00000180176|P07101-6|TH;REV__nc|ENSG00000180176|P07101|TH	32.81241826257853	0.3924360933802784	3				NaN	NaN	0	NaN	2849	3419	6266
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6271	21.697	NaN	2118.3	30	0	310.53	0.106	+			26493	LTMGIGPW	8	57	437.7258829024044	NaN	0	437.7253723144531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LTMGIGPW_	FKBPL|p.V148I|1|0.42|ENSG00000204315|chr6:32129339-32129339|C/T|missense_variant	39.021493756699265	1.7418937515398478	3				NaN	NaN	0	NaN	2850	3419	6266
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6272	21.699	NaN	2034.8	30	0	177.36	0.037	+			18214	INAVSIDMLL	10	44	368.87116083270223	1103.5916530983068	3	368.8698425292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_INAVSIDM(Oxidation (M))LL_	ENSG00000174611|ENST00000423778|KY;nc|ENSG00000174611|Q8NBH2-3|KY	45.97224482568171	0.49411383603842696	3				NaN	NaN	0	NaN	2851	3419	6266
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6273	21.7	NaN	1188.9	30	0	165.51	0.138			+	43491	TGPTPAVAR	9	40	435.2453846610758	NaN	0	435.2445373535156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TGPTPAVAR_	REV__ENSG00000278803|ENST00000458091|PWWP4	35.61828744233558	0.29773779453147337	3				NaN	NaN	0	NaN	2852	3419	6266
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6283	21.723	NaN	23027	30	0	4070.8	0.214	+			41828	SVSTHLITK	9	79	493.28799386042147	984.561434787643	2	493.2871398925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSTHLITK_	ENSG00000177873|ENST00000432264|ZNF619;ENST00000494154.6_1_3:40523704-40529729:+|nuORF;nc|ENSG00000177873|Q8N2I2-2|ZNF619;nc|ENSG00000177873|Q8N2I2-4|ZNF619;nc|ENSG00000177873|Q8N2I2|ZNF619	129.42129120953632	0.01549634589885217	3				NaN	NaN	0	NaN	2859	3422	6282
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6284	21.727	NaN	4856.4	30	0	618.1	0.106	+			36356	SESTNQRVL	9	66	517.2674823488952	1032.5204117645903	2	517.2675170898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SESTNQRVL_	ENSG00000158604|ENST00000457408|TMED4;ENSG00000184840|ENST00000332598|TMED9;ENST00000507723.1_1_5:177021070-177022414:+|nuORF;ENST00000513799.5_1_5:177019550-177022414:+|nuORF;nc|ENSG00000158604|Q7Z7H5-2|TMED4	67.49366992349736	0.1516260258713357	3				NaN	NaN	0	NaN	2860	3422	6282
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6285	21.729	NaN	8431.1	30	0	1008.7	0.106	+			19484	KATEHLSTL	9	67	500.2776204999839	998.5406880667679	2	500.27691650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KATEHLSTL_	ENSG00000118137|ENST00000236850|APOA1	95.81516180277367	0.04847050768394289	3				NaN	NaN	0	NaN	2861	3422	6282
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6286	21.731	NaN	1745.4	30	0	221	0.106	+			12140	GAIEKTFTK	9	51	497.7824058099198	993.5502586866396	2	497.78167724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GAIEKTFTK_	ENSG00000140006|ENST00000620954|WDR89	63.53385203322761	0.18415635464017938	3				NaN	NaN	0	NaN	2862	3422	6282
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6287	21.733	NaN	4032.6	30	0	387.07	0.106	+			36357	SESTNQRVL	9	58	517.2674823488952	1032.5204117645903	2	517.768798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SESTNQRVL_	ENSG00000158604|ENST00000457408|TMED4;ENSG00000184840|ENST00000332598|TMED9;ENST00000507723.1_1_5:177021070-177022414:+|nuORF;ENST00000513799.5_1_5:177019550-177022414:+|nuORF;nc|ENSG00000158604|Q7Z7H5-2|TMED4	77.31757898189308	0.1091473830098891	3				NaN	NaN	0	NaN	2863	3422	6282
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6288	21.734	NaN	2977.3	30	0	375.62	0.036	+			24132	LEKTVKNCL	9	60	552.8076819074312	1103.6008108816623	2	552.80810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_LEKTVKNC(Carbamidomethyl (C))L_	ENSG00000113648|ENST00000511689|MACROH2A1;ENST00000511494.5_1_5:134670668-134681802:-|nuORF;ENST00000512507.5_1_5:134670668-134688768:-|nuORF;nc|ENSG00000113648|O75367-3|MACROH2A1;nc|ENSG00000113648|O75367|MACROH2A1	87.69643885390035	0.07135982304947239	3				NaN	NaN	0	NaN	2864	3422	6282
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6289	21.735	NaN	1520.3	30	0	204.58	0.14			+	24556	LGLVPLEDS	9	52	471.7610778808594	NaN	0	471.7610778808594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LGLVPLEDS_	REV__ENSG00000108679|ENST00000262776|LGALS3BP;REV__ENST00000586720.5_1_17:76967660-76975958:-|nuORF;REV__ENST00000587251.5_1_17:76967660-76972124:-|nuORF	40.5726180659479	0.27166212580479165	3				NaN	NaN	0	NaN	2865	3422	6282
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6299	21.76	NaN	17115	30	0	1971.6	0.214	+			4406	ATIDGSVNPK	10	79	501.26722685491325	1000.5199007766265	2	501.2669372558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATIDGSVNPK_	ENSG00000116830|ENST00000369466|TTF2;ENST00000463696.1_1_1:117637951-117640053:+|nuORF;ENST00000492682.5_1_1:117635418-117640830:+|nuORF;TTF2|p.K1134Efs*22|1|0.25|ENSG00000116830|chr1:117101426-117101427|-/A|frameshift_variant	128.60217544463768	0.01518043149187549	3				NaN	NaN	0	NaN	2872	3425	6298
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6300	21.764	NaN	5621.9	30	0	1173.4	0.106	+			19923	KEFEGKTL	8	63	476.26137462744646	950.5081963216929	2	476.2608337402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEFEGKTL_	ENSG00000080824|ENST00000216281|HSP90AA1;ENST00000378770.1_1_4:190394307-190396341:+|nuORF;ENST00000530115.1_1_11:27910903-27911533:-|nuORF;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000205100|Q58FG1|HSP90AA4P	95.81516180277367	0.2598660847282228	3				NaN	NaN	0	NaN	2873	3425	6298
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6301	21.766	NaN	8112.3	30	0	1834	0.106	+			22313	KTFEGNLTTK	10	69	569.8089038169629	1137.6032547007258	2	569.8092041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KTFEGNLTTK_	ENSG00000174231|ENST00000304992|PRPF8	196.51786170233515	6.253840676832931E-06	3				NaN	NaN	0	NaN	2874	3425	6298
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6302	21.767	NaN	3698.1	30	0	236.78	0.106			+	16174	HEAKKVEQE	9	73	549.2835356939606	1096.5525184547212	2	549.2838134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HEAKKVEQE_	REV__ENSG00000133422|ENST00000397641|MORC2;REV__ENST00000469915.1_1_22:31332963-31338135:-|nuORF;REV__nc|ENSG00000133422|Q9Y6X9-2|MORC2	115.49404669440601	0.023927554121326553	3				NaN	NaN	0	NaN	2875	3425	6298
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6303	21.769	NaN	2405.9	30	0	296.54	0.106				-1	 	0	45	364.73822624836646	NaN	0	364.7381896972656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2876	3425	6298
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6304	21.771	NaN	2385.5	30	0	282.21	0.106			+	-1	KNNRCHRT	8	61	543.2729013667895	NaN	0	543.2730102539062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_KNNRC(Carbamidomethyl (C))HRT_	REV__ENST00000421291.1_1_3:6814754-6815018:-|nuORF	64.20726635412375	1.7418937515398478	3				NaN	NaN	0	NaN	2877	3425	6298
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6305	21.773	NaN	2800.5	30	0	1226.3	0.032				-1	 	0	42	384.77251356766465	767.5304742021293	2	384.77203369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2878	3425	6298
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6316	21.796	NaN	4459.1	30	0	452.27	0.214	+			16205	HECASINRI	9	74	550.2692844549922	1098.5240159767843	2	550.2696533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_HEC(Carbamidomethyl (C))ASINRI_	ENSG00000172531|ENST00000376745|PPP1CA;ENSG00000186298|ENST00000335007|PPP1CC;ENSG00000213639|ENST00000395366|PPP1CB;ENST00000526510.5_1_11:67166008-67168740:-|nuORF;ENST00000532446.5_1_11:67166008-67168991:-|nuORF;nc|ENSG00000172531|P62136-2|PPP1CA;nc|ENSG00000172531|P62136-3|PPP1CA;nc|ENSG00000186298|P36873-2|PPP1CC;PPP1CB|p.E217Rfs*3|1|0.29|ENSG00000213639|chr2:28788708-28788709|-/G|frameshift_variant	82.24051045832904	0.08786059719216216	3				NaN	NaN	0	NaN	2886	3428	6315
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6317	21.8	NaN	3051.1	30	0	471.2	0.106	+			43879	TMMGQQVAK	9	59	497.24717364446104	992.4797943557221	2	497.24688720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TMMGQQVAK_	ENSG00000106853|ENST00000407693|PTGR1;ENST00000374308.1_1_9:114355204-114361641:-|nuORF;ENST00000374313.5_1_9:114355204-114361983:-|nuORF;nc|ENSG00000106853|Q14914-2|PTGR1	67.49366992349736	0.1516260258713357	3				NaN	NaN	0	NaN	2887	3428	6315
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6318	21.802	NaN	4941.5	30	0	559.33	0.106	+			22314	KTFEGNLTTK	10	57	380.20855376274164	1137.603831888425	3	380.20831298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KTFEGNLTTK_	ENSG00000174231|ENST00000304992|PRPF8	60.1669710687717	0.3643216362415131	3				NaN	NaN	0	NaN	2888	3428	6315
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6319	21.804	NaN	5613.9	30	0	1054.6	0.106	+			5076	ATSLGHFTK	9	65	481.25895773358224	960.5033625339645	2	481.25823974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATSLGHFTK_	ENSG00000060237|ENST00000315939|WNK1;ENST00000540885.1_1_12:1016996-1017955:+|nuORF;nc|ENSG00000060237|Q9H4A3-2|WNK1;nc|ENSG00000060237|Q9H4A3-4|WNK1;nc|ENSG00000060237|Q9H4A3-5|WNK1;nc|ENSG00000060237|Q9H4A3-6|WNK1;nc|ENSG00000060237|Q9H4A3-7|WNK1	78.26377905018397	0.10505600812668463	3				NaN	NaN	0	NaN	2889	3428	6315
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6320	21.806	NaN	3831.6	30	0	489.55	0.106	+			46904	VISRAISVK	9	55	486.8138960156145	971.613239098029	2	486.81317138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VISRAISVK_	ENST00000530759.1_1_11:76155338-76155506:-|nuORF	90.60085204095205	0.06317133949006545	3				NaN	NaN	0	NaN	2890	3428	6315
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6321	21.807	NaN	1091.6	30	0	129.9	0.106				-1	 	0	45	388.7553853147562	775.4962176963124	2	388.7549743652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2891	3428	6315
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6322	21.809	NaN	2154	30	0	948.32	0.037	+			32520	QVQRPFMNK	9	52	574.3055916645513	1146.5966303959026	2	574.3060913085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QVQRPFMNK_	ENST00000281172.9_1_12:15822752-15835827:-|nuORF	87.75429964447693	0.0711966946989736	3				NaN	NaN	0	NaN	2892	3428	6315
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6334	21.835	NaN	4245.4	30	0	895.25	0.214	+			50551	YASTAKCL	8	61	457.2260805883423	912.4376082434846	2	457.225830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_YASTAKC(Carbamidomethyl (C))L_	ENSG00000142089|ENST00000399808|IFITM3;ENSG00000185201|ENST00000616316|IFITM2;ENSG00000185885|ENST00000408968|IFITM1;ENST00000505282.1_1_4:66959972-66960239:+|nuORF;ENST00000527146.1_2_11:308871-309162:+|nuORF	87.75429964447693	0.2842685068779738	3				NaN	NaN	0	NaN	2901	3431	6333
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6335	21.838	NaN	7969.9	30	0	2770	0.106	+			24609	LGRRAAEAPI	10	40	351.8771839135341	1052.6097223408024	3	351.87689208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LGRRAAEAPI_	ENST00000296677.4_1_5:76114869-76114908:+|nuORF	29.170058357718403	0.6416167986984785	3				NaN	NaN	0	NaN	2902	3431	6333
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6336	21.84	NaN	2940.3	30	0	297.12	0.106	+			51247	YQKIGKAL	8	55	460.78190159202785	919.5492502508557	2	460.781494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YQKIGKAL_	ENSG00000130340|ENST00000392185|SNX9	65.80317337860623	0.44433089765398776	3				NaN	NaN	0	NaN	2903	3431	6333
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6337	21.842	NaN	1795.9	30	0	435.1	0.106	+			45029	TVGAAGWK	8	38	395.2162822638447	NaN	0	395.2163391113281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TVGAAGWK_	ENSG00000128951|ENST00000331200|DUT	60.29395666154354	1.7418937515398478	3				NaN	NaN	0	NaN	2904	3431	6333
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6338	21.844	NaN	2174.9	30	0	414.09	0.106			+	-1	ATKVTSLC	8	56	440.2340158608145	878.453478788429	2	440.2334289550781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_ATKVTSLC(Carbamidomethyl (C))_	REV__ENST00000427140.5_1_20:57096455-57096542:+|nuORF	31.954861631926434	0.7126016770032289	3				NaN	NaN	0	NaN	2905	3431	6333
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6339	21.846	NaN	6269.2	30	0	2768.4	0.035			+	4991	ATRTLISSR	9	34	335.5331962648024	1003.5777593946073	3	335.5330810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATRTLISSR_	REV__ENST00000263212.9_2_22:22274709-22275219:-|nuORF	37.81151784470057	0.4459294069877048	3				NaN	NaN	0	NaN	2906	3431	6333
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6340	21.846	NaN	2152.5	30	0	873.31	0.141	+			21998	KSFGELVHK	9	46	348.866102810782	1043.576479032546	3	348.8658752441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KSFGELVHK_	ENSG00000071054|ENST00000324219|MAP4K4;MAP4K4|p.G1177Efs*5|1|0.19|ENSG00000071054|chr2:101888826-101888826|G/-|frameshift_variant;nc|ENSG00000071054|O95819-2|MAP4K4;nc|ENSG00000071054|O95819-3|MAP4K4;nc|ENSG00000071054|O95819-4|MAP4K4;nc|ENSG00000071054|O95819-5|MAP4K4;nc|ENSG00000071054|O95819-6|MAP4K4;nc|ENSG00000071054|O95819|MAP4K4	45.97224482568171	0.3502073465782774	3				NaN	NaN	0	NaN	2907	3431	6333
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6349	21.868	NaN	6890.3	30	0	2793.3	0.214	+			49017	VVGPVGCGK	9	46	408.2262082025972	814.4378634719944	2	408.2256774902344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVGPVGCGK_	ABCC3|p.A658D|1|0.1|ENSG00000108846|chr17:50669175-50669175|C/A|missense_variant;ABCC3|p.L968Afs*31|1|0.33|ENSG00000108846|chr17:50675920-50675921|-/G|frameshift_variant;ENSG00000108846|ENST00000285238|ABCC3;ENST00000502426.5_1_17:48736553-48755440:+|nuORF;nc|ENSG00000108846|O15438-2|ABCC3;nc|ENSG00000108846|O15438-4|ABCC3	47.91560031466742	0.327412564698279	3				NaN	NaN	0	NaN	2913	3434	6348
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6350	21.871	NaN	6445.9	30	0	1286.4	0.106			+	2042	AKRGKAAASPP	11	66	527.3119127523942	1052.6092725715882	2	527.312255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AKRGKAAASPP_	REV__ENSG00000168502|ENST00000695636|MTCL1;REV__MTCL1|p.G1084Vfs*116|1|0.23|ENSG00000168502|chr18:8798144-8798144|G/-|frameshift_variant;REV__MTCL1|p.G604Afs*38|1|0.5|ENSG00000168502|chr18:8783840-8783840|G/-|frameshift_variant;REV__MTCL1|p.L1858Wfs*5|1|0.26|ENSG00000168502|chr18:8826125-8826125|C/-|frameshift_variant;REV__MTCL1|p.L694Cfs*5|1|0.37|ENSG00000168502|chr18:8784107-8784107|C/-|frameshift_variant;REV__MTCL1|p.P1448Afs*83|1|0.4|ENSG00000168502|chr18:8824888-8824889|-/G|frameshift_variant;REV__MTCL1|p.P1841Lfs*22|1|0.05|ENSG00000168502|chr18:8826071-8826071|C/-|frameshift_variant;REV__MTCL1|p.W1259Efs*14|1|0.09|ENSG00000168502|chr18:8813191-8813192|-/GAGCC|frameshift_variant;REV__nc|ENSG00000168502|Q9Y4B5|MTCL1	50.79123845855914	0.4102859592092987	3				NaN	NaN	0	NaN	2914	3434	6348
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6351	21.873	NaN	4586.8	30	0	1384.6	0.106	+			7291	DARGLLALR	9	62	492.80136318719343	983.5881734411869	2	492.8007507324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DARGLLALR_	ENSG00000173868|ENST00000310544|PHOSPHO1;nc|ENSG00000173868|Q8TCT1-2|PHOSPHO1;nc|ENSG00000173868|Q8TCT1-3|PHOSPHO1	41.42661286455405	0.403525789677298	3				NaN	NaN	0	NaN	2915	3434	6348
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6352	21.875	NaN	5276	30	0	546.64	0.106	+			38103	SPVNSSKQPSY	11	72	597.2939300710789	1192.5733072089577	2	597.2935180664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SPVNSSKQPSY_	ENSG00000159199|ENST00000393366|ATP5MC1;ENST00000502964.5_1_17:46971694-46973128:+|nuORF;ENST00000513781.5_1_17:46970480-46973128:+|nuORF	125.68205650279488	0.009258456973060042	3				NaN	NaN	0	NaN	2916	3434	6348
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6353	21.877	NaN	4182.3	30	0	641.7	0.106	+			3831	ATAIGMPVEK	10	64	516.7736596267735	NaN	0	516.7736206054688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_ATAIGM(Oxidation (M))PVEK_	ENSG00000109736|ENST00000355443|MFSD10;ENST00000509676.1_1_4:2934766-2935650:-|nuORF;MFSD10|p.S111Gfs*48|1|0.44|ENSG00000109736|chr4:2933125-2933147|GGGCGCCTCCCCAAGCAGTCAGA/-|frameshift_variant	83.6470233535746	0.08151478778011129	3				NaN	NaN	0	NaN	2917	3434	6348
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6354	21.879	NaN	8651.6	30	0	2580.9	0.039	+			48284	VTDPSIPIRKK	11	53	418.59121440694787	1252.7518138210437	3	418.5904846191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTDPSIPIRKK_	ELF4|p.A554Pfs*13|1|0.32|ENSG00000102034|chrX:130067053-130067053|C/-|frameshift_variant;ELF4|p.Q341Rfs*30|2|0.25|ENSG00000102034|chrX:130069466-130069466|G/-|frameshift_variant;ENSG00000102034|ENST00000308167|ELF4	43.650786325866115	0.5079891456189096	3				NaN	NaN	0	NaN	2918	3434	6348
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6355	21.879	NaN	2680.7	30	0	462.57	0.141	+			23332	KYSLVKNKI	9	60	546.8426832125128	1091.6708134918256	2	546.8427124023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KYSLVKNKI_	ENSG00000188643|ENST00000368706|S100A16;ENST00000474991.1_1_1:153580188-153585458:-|nuORF	65.46538089061403	0.16805504838372562	3				NaN	NaN	0	NaN	2919	3434	6348
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6365	21.903	NaN	25317	30	0	2714.3	0.214	+			24207	LERKVESL	8	86	487.28807235256255	972.5615917719251	2	487.2873229980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LERKVESL_	ENSG00000026025|ENST00000544301|VIM;ENST00000421459.2_2_10:17272631-17276850:+|nuORF	101.25262130126117	0.2499877059228457	3				NaN	NaN	0	NaN	2926	3437	6364
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6366	21.907	NaN	10481	30	0	1167.8	0.106	+			37924	SPEDIKKAY	9	79	525.7772972014122	1049.5400414696244	2	525.7774658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SPEDIKKAY_	DNAJB6|p.R24W|1|0.27|ENSG00000105993|chr7:157363165-157363165|C/T|missense_variant;DNAJB7|p.A14V|1|0.08|ENSG00000172404|chr22:40861954-40861954|G/A|missense_variant;DNAJB8|p.R24H|1|0.38|ENSG00000179407|chr3:128463175-128463175|C/T|missense_variant;ENSG00000105993|ENST00000262177|DNAJB6;ENSG00000172404|ENST00000307221|DNAJB7;ENSG00000179407|ENST00000319153|DNAJB8;ENST00000488001.5_1_7:157151266-157161444:+|nuORF;ENST00000526843.2_1_11:127810983-127811547:-|nuORF;nc|ENSG00000105993|O75190-2|DNAJB6;nc|ENSG00000105993|O75190-3|DNAJB6	140.11223852658463	0.010427410095706195	3				NaN	NaN	0	NaN	2927	3437	6364
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6367	21.909	NaN	9297.6	30	0	1496.3	0.106	+			12891	GESAVGKSSL	10	64	467.7459841320178	933.4774153308356	2	467.7453918457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GESAVGKSSL_	ENSG00000108774|ENST00000346213|RAB5C;ENSG00000111540|ENST00000360299|RAB5B;ENSG00000144566|ENST00000273047|RAB5A;ENST00000476544.1_1_3:19992384-19992582:+|nuORF;ENST00000546810.1_1_12:56367874-56383936:+|nuORF;ENST00000550013.1_1_17:40282343-40282577:-|nuORF;nc|ENSG00000108774|P51148-2|RAB5C;nc|ENSG00000111540|P61020-2|RAB5B;nc|ENSG00000144566|P20339-2|RAB5A	122.93914200107957	0.02317863035582428	3				NaN	NaN	0	NaN	2928	3437	6364
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6368	21.911	NaN	6417.4	30	0	1769.2	0.106	+			37666	SLREGVTVI	9	53	325.1941144021583	NaN	0	325.1941223144531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLREGVTVI_	ENST00000273610.3_1_3:48599595-48600222:-|nuORF	30.503639358989545	0.3235605894931338	3				NaN	NaN	0	NaN	2929	3437	6364
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6369	21.912	NaN	2409.3	30	0	1001.7	0.106			+	32215	QTAIYAKAK	9	53	497.29050672321523	992.5664605132305	2	497.2894287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QTAIYAKAK_	REV__ENSG00000144724|ENST00000474889|PTPRG;REV__ENST00000475012.5_1_3:62203523-62278979:+|nuORF;REV__nc|ENSG00000144724|P23470-2|PTPRG;REV__PTPRG|p.E1273*|1|0.29|ENSG00000144724|chr3:62281605-62281606|-/TGAACTGT|frameshift_variant;REV__PTPRG|p.Q1315Sfs*12|1|0.24|ENSG00000144724|chr3:62282754-62282754|T/-|frameshift_variant	32.81241826257853	0.4965981579233955	3				NaN	NaN	0	NaN	2930	3437	6364
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6370	21.914	NaN	1219.6	30	0	154.73	0.106	+			913	AEIEGLKGQRA	11	53	586.3258349213484	1170.6371169094966	2	586.325439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEIEGLKGQRA_	CON__H-INV:HIT000292931;CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;ENST00000547031.5_1_12:53292389-53294972:-|nuORF;ENST00000562317.1_1_16:78082520-78083381:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	53.08895987439943	0.38514566451266113	3				NaN	NaN	0	NaN	2931	3437	6364
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6371	21.916	NaN	1623.9	30	0	180.16	0.036	+			22705	KVANGRVFTL	10	54	552.8298094384313	1103.6450659436625	2	552.8301391601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KVANGRVFTL_	VWCE|p.Q698R|1|0.28|ENSG00000167992|chr11:61265002-61265002|T/C|missense_variant	63.42647028704847	0.33467688528802414	3				NaN	NaN	0	NaN	2932	3437	6364
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6378	21.932	NaN	2796.9	30	0	367.06	0.214	+			22701	KVAITRLEQ	9	68	529.3217251723231	1056.6288974114461	2	529.322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVAITRLEQ_	ENSG00000197444|ENST00000374103|OGDHL;ENST00000490844.1_1_10:50943276-50946169:-|nuORF;nc|ENSG00000197444|Q9ULD0-2|OGDHL;nc|ENSG00000197444|Q9ULD0-3|OGDHL	67.49366992349736	0.1516260258713357	3				NaN	NaN	0	NaN	2936	3440	6377
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6379	21.936	NaN	2508.5	30	0	393.68	0.106	+			42465	TAMLPSSKR	9	55	495.7741631757335	989.5337734182671	2	495.7735900878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAMLPSSKR_	ABCA12|p.Q747K|1|0.05|ENSG00000144452|chr2:215011532-215011532|G/T|missense_variant	84.9155231211612	0.07920012719736333	3				NaN	NaN	0	NaN	2937	3440	6377
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6380	21.938	NaN	2355	30	0	196.34	0.106	+			44554	TTANVRIIK	9	61	508.31704199423194	1014.6195310552639	2	508.3168029785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TTANVRIIK_	ENSG00000004534|ENST00000266022|RBM6;ENST00000441115.5_1_3:50012785-50103056:+|nuORF;ENST00000483350.1_1_3:50036895-50096022:+|nuORF;nc|ENSG00000004534|P78332-2|RBM6;RBM6|p.K760Nfs*101|1|0.25|ENSG00000004534|chr3:50061143-50061143|A/-|frameshift_variant;RBM6|p.K834Nfs*27|4|0.24|ENSG00000004534|chr3:50062017-50062017|A/-|frameshift_variant	72.87924865735499	0.12833875048249987	3				NaN	NaN	0	NaN	2938	3440	6377
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6381	21.94	NaN	1392.2	30	0	236.9	0.106				-1	ASMKKVKSL	9	31	336.53426619977233	NaN	0	336.5343017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_ASM(Oxidation (M))KKVKSL_	ENST00000369426.9_1_1:119575536-119588262:-|nuORF	19.1035232394073	0.3723251548669699	3				NaN	NaN	0	NaN	2939	3440	6377
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6382	21.941	NaN	4154.7	30	0	1522.4	0.106	+			47015	VKYLSKRNP	9	43	368.88921725665307	1103.6458223701593	3	368.8888244628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VKYLSKRNP_	ENSG00000134504|ENST00000580059|KCTD1;KCTD1|p.L68Wfs*21|1|0.32|ENSG00000134504|chr18:26476621-26476621|A/-|frameshift_variant	20.94693142431847	0.6074874384046576	3				NaN	NaN	0	NaN	2940	3440	6377
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6383	21.943	NaN	4227.2	30	0	1489.1	0.106				-1	ATGVCKAVGK	10	35	330.8519807775342	989.5341129328026	3	330.85174560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_ATGVC(Carbamidomethyl (C))KAVGK_	ENSG00000147852|ENST00000382100|VLDLR;nc|ENSG00000147852|P98155-2|VLDLR;VLDLR|p.P558Wfs*8|1|0.03|ENSG00000147852|chr9:2646519-2646520|-/ATGGACTTTTT|frameshift_variant	28.081489160057373	0.6505064946289502	3				NaN	NaN	0	NaN	2941	3440	6377
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6384	21.945	NaN	5002.7	30	0	1443.5	0.036	+			44723	TTLNGIRLK	9	53	339.2136416952588	1014.6190956859764	3	339.5478820800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TTLNGIRLK_	ENST00000551219.5_1_12:71092119-71148195:-|nuORF	35.15202426646627	0.4747332964206883	3				NaN	NaN	0	NaN	2942	3440	6377
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6391	21.961	NaN	4754.8	30	0	793.53	0.214	+			2458	APLKSKMIY	9	68	533.8027673085496	1065.5909816838991	2	533.80224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_APLKSKM(Oxidation (M))IY_	ENSG00000125868|ENST00000246069|DSTN;ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65623104-65623215:-|nuORF;ENST00000602547.1_1_12:6994092-6994545:+|nuORF;nc|ENSG00000125868|P60981-2|DSTN;nc|ENSG00000165410|Q9Y281-3|CFL2	79.71258880314673	0.09879134589249085	3				NaN	NaN	0	NaN	2946	3443	6390
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6392	21.965	NaN	2650.9	30	0	647.5	0.106	+			22968	KVRAHRGPS	9	62	504.2967107214616	1006.5788685097232	2	504.2972106933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVRAHRGPS_	ENST00000565205.5_1_16:88925858-88927364:+|nuORF	49.44154591367651	0.3095138337212152	3				NaN	NaN	0	NaN	2947	3443	6390
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6393	21.967	NaN	2908.7	30	0	368.87	0.106			+	26686	LVHDCGAQ	8	60	421.69546013616747	841.376367339135	2	421.695068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LVHDCGAQ_	REV__ADAMTS9|p.C1222Lfs*15|1|0.3|ENSG00000163638|chr3:64604004-64604004|C/-|frameshift_variant;REV__ADAMTS9|p.S1884Ffs*2|1|0.35|ENSG00000163638|chr3:64533233-64533233|G/-|frameshift_variant;REV__ENSG00000163638|ENST00000498707|ADAMTS9;REV__ENST00000475557.5_1_3:64600969-64673333:-|nuORF;REV__ENST00000482490.5_1_3:64536549-64672246:-|nuORF;REV__nc|ENSG00000163638|Q9P2N4-1|ADAMTS9;REV__nc|ENSG00000163638|Q9P2N4-2|ADAMTS9;REV__nc|ENSG00000163638|Q9P2N4-4|ADAMTS9	38.80614096846853	0.6637206697844082	3				NaN	NaN	0	NaN	2948	3443	6390
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6394	21.969	NaN	2150	30	0	304.46	0.106	+			29038	NSVGSVHSY	9	52	475.22274331827686	948.4309337033537	2	475.2220153808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NSVGSVHSY_	ENSG00000198815|ENST00000361346|FOXJ3;nc|ENSG00000198815|Q9UPW0-2|FOXJ3	42.396135135203025	0.392153681582562	3				NaN	NaN	0	NaN	2949	3443	6390
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6395	21.97	NaN	8035.7	30	0	1122.9	0.106				-1	 	0	64	373.2101605812227	1116.608652343868	3	373.5419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2950	3443	6390
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6396	21.972	NaN	2234.9	30	0	283.16	0.106	+			5921	AVLEKQDISDK	11	66	623.3387297793123	1244.6629066254245	2	623.3384399414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AVLEKQDISDK_	ENSG00000135932|ENST00000258418|CAB39	110.63693656944632	0.03869675661758342	3				NaN	NaN	0	NaN	2951	3443	6390
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6397	21.974	NaN	3630.2	30	0	1232.2	0.036	+			1976	AIYQKDEAL	9	40	350.8539298528613	1049.539960158784	3	350.85382080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AIYQKDEAL_	ENSG00000166963|ENST00000300231|MAP1A;MAP1A|p.G2418Afs*36|1|0.26|ENSG00000166963|chr15:43528722-43528722|G/-|frameshift_variant;MAP1A|p.K1546Rfs*6|1|0.28|ENSG00000166963|chr15:43526107-43526107|A/-|frameshift_variant;MAP1A|p.L1905Pfs*9|1|0.27|ENSG00000166963|chr15:43527180-43527181|-/C|frameshift_variant;MAP1A|p.R2065Vfs*5|1|0.25|ENSG00000166963|chr15:43527660-43527660|C/-|frameshift_variant;MAP1A|p.S2460Ifs*4|1|0.32|ENSG00000166963|chr15:43528844-43528845|-/C|frameshift_variant;MAP1A|p.T1385I|1|0.36|ENSG00000166963|chr15:43525627-43525627|C/T|missense_variant;MAP1A|p.V1503Sfs*16|1|0.28|ENSG00000166963|chr15:43525975-43525975|A/-|frameshift_variant;nc|ENSG00000166963|P78559-2|MAP1A	34.172542307311794	0.4838870758800184	3				NaN	NaN	0	NaN	2952	3443	6390
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6402	21.989	NaN	6844.2	30	0	1324.5	0.214	+			12940	GESSGKNVTL	10	70	496.2567320236763	990.4989111141526	2	496.2561340332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GESSGKNVTL_	ENSG00000174444|ENST00000307961|RPL4;ENST00000561554.5_1_15:66795666-66797161:-|nuORF;ENST00000561775.5_1_15:66795189-66797161:-|nuORF;ENST00000564439.5_1_15:66793756-66797161:-|nuORF;ENST00000566039.5_1_15:66793707-66797161:-|nuORF;ENST00000566622.5_1_15:66794044-66797161:-|nuORF;ENST00000566624.5_1_15:66794944-66797161:-|nuORF;ENST00000567229.5_1_15:66795359-66797161:-|nuORF	80.91624569148213	0.18813531420570515	3				NaN	NaN	0	NaN	2954	3446	6401
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6403	21.992	NaN	3945.5	30	0	415.71	0.106				-1	 	0	42	397.2379816720701	792.4614104109402	2	397.2373352050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2955	3446	6401
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6404	21.994	NaN	2144.9	30	0	427.35	0.106			+	11892	FTPVEITH	8	56	472.24637765299474	942.4782023727895	2	472.24560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FTPVEITH_	REV__APOB|p.A2932Pfs*19|1|0.36|ENSG00000084674|chr2:21008074-21008074|C/-|frameshift_variant;REV__APOB|p.K4541Sfs*8|1|0.34|ENSG00000084674|chr2:21001800-21001800|T/-|frameshift_variant;REV__APOB|p.S3866Yfs*21|1|0.06|ENSG00000084674|chr2:21005271-21005272|-/TAAGAAAT|frameshift_variant;REV__ENSG00000084674|ENST00000233242|APOB	42.47446043378293	0.6409579893742323	3				NaN	NaN	0	NaN	2956	3446	6401
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6405	21.996	NaN	2656.6	30	0	441.92	0.106			+	50235	WPGGPPLLVA	10	67	503.78734204182615	NaN	0	503.78765869140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_WPGGPPLLVA_	REV__ENSG00000124587|ENST00000304611|PEX6;REV__nc|ENSG00000124587|Q13608-2|PEX6;REV__nc|ENSG00000124587|Q13608-3|PEX6	47.657333605630114	0.3204131577145918	3				NaN	NaN	0	NaN	2957	3446	6401
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6406	21.998	NaN	2933.5	30	0	643.68	0.106			+	-1	TPLNICNGK	9	39	339.51059781196176	1015.5099640360853	3	339.5101623535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_TPLNIC(Carbamidomethyl (C))NGK_	REV__nc|ENSG00000185842|Q0VDD8-4|DNAH14	34.172542307311794	0.4838870758800184	3				NaN	NaN	0	NaN	2958	3446	6401
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6407	21.999	NaN	4746.1	30	0	1474.8	0.106	+			20839	KIIEVHVEK	9	59	365.55736318258715	1093.6502601479615	3	365.5569152832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KIIEVHVEK_	ENSG00000140403|ENST00000394852|DNAJA4;ENST00000485075.1_1_15:78562865-78566840:+|nuORF;nc|ENSG00000140403|Q8WW22-2|DNAJA4;nc|ENSG00000140403|Q8WW22-3|DNAJA4	53.08895987439943	0.27122541748218487	3				NaN	NaN	0	NaN	2959	3446	6401
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6408	22.001	NaN	7706.4	30	0	3096.7	0.035				-1	LAAVATHRV	9	34	327.1944635387974	978.5615612165922	3	327.19403076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LAAVATHRV_	ENST00000558592.1_1_15:102284791-102285862:-|nuORF	24.20275056022122	0.577060078256802	3				NaN	NaN	0	NaN	2960	3446	6401
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6417	22.021	NaN	20007	30	0	4940.7	0.214	+			4316	ATGKRFYFK	9	78	373.2101605812227	1116.608652343868	3	373.5428771972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATGKRFYFK_	CLCA1|p.N76_V77insLLF|1|0.06|ENSG00000016490|chr1:86473481-86473482|-/CTTGTTATT|inframe_insertion;CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	42.396135135203025	0.392153681582562	3				NaN	NaN	0	NaN	2966	3449	6416
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6418	22.025	NaN	4323.6	30	0	2454.3	0.106	+			280	AAPATRAAL	9	54	421.2484433332019	840.4823337332039	2	421.24822998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAPATRAAL_	ENSG00000139370|ENST00000266771|SLC15A4	69.6276240434122	0.14239879520340665	3				NaN	NaN	0	NaN	2967	3449	6416
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6419	22.027	NaN	4801.1	30	0	454.77	0.106	+			42186	TAAAAVRQM	9	60	459.744887022546	917.475221111892	2	459.7448425292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TAAAAVRQM_	ENSG00000130985|ENST00000335972|UBA1;nc|ENSG00000130985|P22314-2|UBA1	107.00750918261382	0.032051501805654005	3				NaN	NaN	0	NaN	2968	3449	6416
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6420	22.029	NaN	2742.3	30	0	622.49	0.106	+			6364	AVTTVVNPK	9	50	464.77662095924086	927.5386889852817	2	464.77655029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVTTVVNPK_	ENSG00000150093|ENST00000302278|ITGB1	67.49366992349736	0.1516260258713357	3				NaN	NaN	0	NaN	2969	3449	6416
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6421	22.031	NaN	895.92	30	0	142.3	0.106	+			45046	TVGGLIYWI	9	50	511.2875809475744	1020.5606089619488	2	511.2878112792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TVGGLIYWI_	CD207|p.A246V|1|0.23|ENSG00000116031|chr2:70831800-70831800|G/A|missense_variant	40.77816245573522	0.41113185337114944	3				NaN	NaN	0	NaN	2970	3449	6416
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6422	22.032	NaN	1909.9	30	0	266.44	0.036			+	22363	KTHKRSPQH	9	63	559.8117572781274	1117.6089616230547	2	559.8106689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KTHKRSPQH_	REV__ZSCAN1|p.L265R|1|0.23|ENSG00000152467|chr19:58053618-58053618|T/G|missense_variant	40.77816245573522	0.41113185337114944	3				NaN	NaN	0	NaN	2971	3449	6416
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6423	22.033	NaN	5007.5	30	0	997.25	0.14				-1	 	0	63	486.316380337206	970.618207741212	2	486.31610107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2972	3449	6416
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6431	22.053	NaN	17551	30	0	10501	0.214				-1	 	0	53	324.54666817971605	970.6181751393482	3	324.5464172363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2977	3452	6430
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6432	22.056	NaN	4906.5	30	0	707.05	0.106	+			26727	LVLKDKVK	8	59	471.8213981664345	941.628243399669	2	471.8205871582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LVLKDKVK_	ENSG00000131013|ENST00000253329|PPIL4	51.33545320467046	0.5859736979383976	3				NaN	NaN	0	NaN	2978	3452	6430
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6433	22.058	NaN	2984.6	30	0	515.51	0.106			+	19240	KAARYSPLKF	10	63	590.8459013561794	1179.6772497791587	2	590.8455810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KAARYSPLKF_	REV__ENSG00000159023|ENST00000343067|EPB41;REV__EPB41|p.K805Rfs*3|1|0.19|ENSG00000159023|chr1:29109433-29109433|C/-|frameshift_variant;REV__EPB41|p.T582Qfs*11|1|0.24|ENSG00000159023|chr1:29053205-29053205|A/-|frameshift_variant;REV__nc|ENSG00000159023|P11171-2|EPB41;REV__nc|ENSG00000159023|P11171-3|EPB41;REV__nc|ENSG00000159023|P11171-4|EPB41;REV__nc|ENSG00000159023|P11171-5|EPB41;REV__nc|ENSG00000159023|P11171-6|EPB41;REV__nc|ENSG00000159023|P11171-7|EPB41	93.19546047674547	0.11277922692270353	3				NaN	NaN	0	NaN	2979	3452	6430
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6434	22.06	NaN	6705.1	30	0	2716.7	0.106			+	7449	DFIPTVRGIA	10	38	363.5417143920348	1087.6033137763045	3	363.54144287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DFIPTVRGIA_	REV__ENSG00000143839|ENST00000272190|REN;REV__nc|ENSG00000143839|P00797-2|REN	23.52269567125451	0.6877354443478558	3				NaN	NaN	0	NaN	2980	3452	6430
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6435	22.062	NaN	4556.5	30	0	2474.6	0.106	+			8327	EAKKTGNVKN	10	64	544.8083166315874	1087.6020803299748	2	544.8082275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EAKKTGNVKN_	ENSG00000075292|ENST00000264447|ZNF638;nc|ENSG00000075292|Q14966-3|ZNF638;nc|ENSG00000075292|Q14966-4|ZNF638;ZNF638|p.A1154Qfs*28|1|0.42|ENSG00000075292|chr2:71422969-71422969|A/-|frameshift_variant;ZNF638|p.E1606Lfs*12|1|0.06|ENSG00000075292|chr2:71426683-71426684|-/CCTGAGAA|frameshift_variant;ZNF638|p.G1305Rfs*2|2|0.26|ENSG00000075292|chr2:71423418-71423419|-/A|frameshift_variant;ZNF638|p.G1305Vfs*22|2|0.39|ENSG00000075292|chr2:71423419-71423419|A/-|frameshift_variant	50.79123845855914	0.44970922346023856	3				NaN	NaN	0	NaN	2981	3452	6430
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6436	22.064	NaN	3420.3	30	0	613.37	0.106			+	20327	KERCALLER	9	64	559.3118042376526	NaN	0	559.3121948242188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KERCALLER_	REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	47.95952297671804	0.22075498469600283	3				NaN	NaN	0	NaN	2982	3452	6430
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6437	22.065	NaN	2291.9	30	0	331.8	0.033			+	45965	VASTKNHT	8	50	429.22772949026086	856.4409060473217	2	429.2271728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VASTKNHT_	REV__ENST00000256458.4_1_3:10283936-10284227:+|nuORF	35.61828744233558	0.6843154725607303	3				NaN	NaN	0	NaN	2983	3452	6430
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6445	22.084	NaN	2560.7	30	0	499.12	0.215				-1	 	0	48	408.27155301017774	814.5285530871555	2	408.27099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2988	3455	6444
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6446	22.087	NaN	3300.9	30	0	710.22	0.106	+			15249	GTTAVLTEK	9	57	460.2585287401432	918.5025045470865	2	460.2579040527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTTAVLTEK_	ENSG00000136930|ENST00000259457|PSMB7	53.08895987439943	0.27122541748218487	3				NaN	NaN	0	NaN	2989	3455	6444
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6447	22.089	NaN	3546.3	30	0	457.58	0.106			+	10184	ETARAFAIK	9	63	503.78734204182615	NaN	0	503.7861328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ETARAFAIK_	REV__ENSG00000038427|ENST00000265077|VCAN;REV__ENST00000513016.5_1_5:82832752-82876250:+|nuORF;REV__nc|ENSG00000038427|P13611-2|VCAN;REV__nc|ENSG00000038427|P13611-5|VCAN;REV__VCAN|p.E2431Rfs*10|1|0.16|ENSG00000038427|chr5:83540290-83540291|-/G|frameshift_variant	44.116797842482775	0.2472372736944149	3				NaN	NaN	0	NaN	2990	3455	6444
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6448	22.091	NaN	1182.5	30	0	290.32	0.106	+			46082	VCSVEKSK	8	51	468.7448176488374	935.4750823644748	2	468.7441711425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_VC(Carbamidomethyl (C))SVEKSK_	CASP8AP2|p.D1810Mfs*3|1|0.43|ENSG00000118412|chr6:89868711-89868711|A/-|frameshift_variant;CASP8AP2|p.E1628Mfs*58|1|0.49|ENSG00000118412|chr6:89868163-89868164|-/AT|frameshift_variant;CASP8AP2|p.N1917Kfs*4|1|0.24|ENSG00000118412|chr6:89869034-89869035|-/A|frameshift_variant;ENSG00000118412|ENST00000551025|CASP8AP2;ENST00000237177.10_1_6:90556308-90583533:+|nuORF;nc|ENSG00000118412|Q9UKL3|CASP8AP2	62.107414245175825	0.4809183816468817	3				NaN	NaN	0	NaN	2991	3455	6444
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6449	22.093	NaN	1516.6	30	0	535.91	0.106			+	24515	LGKKLDRY	8	26	331.5345485541401	991.5818162626204	3	331.5343933105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LGKKLDRY_	REV__ENSG00000163312|ENST00000295488|HELQ;REV__HELQ|p.E864Gfs*7|1|0.07|ENSG00000163312|chr4:83427648-83427649|-/GC|frameshift_variant	13.775330524044264	0.789990904165365	3				NaN	NaN	0	NaN	2992	3455	6444
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6450	22.094	NaN	1808.8	30	0	311.67	0.106	+			4930	ATQNSSQFMK	10	55	571.2692048981135	1140.5238568630268	2	571.2689208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATQNSSQFMK_	ENSG00000162227|ENST00000294168|TAF6L;ENST00000524976.5_1_11:62538888-62549806:+|nuORF;ENST00000532915.1_1_11:62538888-62545815:+|nuORF	56.632244143249146	0.3964695498866976	3				NaN	NaN	0	NaN	2993	3455	6444
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6451	22.096	NaN	1358.9	30	0	441.42	0.036			+	15811	GVWKKPFAI	9	33	349.21102601399474	NaN	0	349.2110595703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GVWKKPFAI_	REV__EPHA5|p.N81Kfs*8|1|0.27|ENSG00000145242|chr4:65643366-65643367|-/T|frameshift_variant	21.9598887501803	0.3626577482100488	3				NaN	NaN	0	NaN	2994	3455	6444
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6459	22.114	NaN	8593.7	30	0	2772.5	0.214	+			33193	REWGAPGT	8	60	437.21454607230925	872.4145392114185	2	437.2141418457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_REWGAPGT_	ENST00000482969.5_1_22:50693515-50695072:-|nuORF;ENST00000497738.1_1_22:50693515-50694479:-|nuORF	60.29395666154354	0.49887135096048313	3				NaN	NaN	0	NaN	2999	3458	6458
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6460	22.118	NaN	8893.8	30	0	1957.6	0.106	+			14364	GTADVHFER	9	77	516.2491359545351	1030.48371897587	2	516.248779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTADVHFER_	ENSG00000183684|ENST00000505490|ALYREF;ENST00000512673.1_1_17:79846815-79848630:-|nuORF;nc|ENSG00000183684|Q86V81|ALYREF	120.27252224102466	0.02103478360410217	3				NaN	NaN	0	NaN	3000	3458	6458
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6461	22.12	NaN	1860.7	30	0	232.99	0.106	+			46235	VEAVSGAAAAL	11	59	479.7642156582621	957.5138783833243	2	479.7637634277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VEAVSGAAAAL_	ENST00000310441.11_1_X:153236792-153236924:-|nuORF	71.87747018426188	0.2200878389444539	3				NaN	NaN	0	NaN	3001	3458	6458
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6462	22.122	NaN	3273.4	30	0	935.28	0.106				-1	 	0	53	384.77251356766465	767.5304742021293	2	384.77178955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3002	3458	6458
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6463	22.124	NaN	2696.4	30	0	462.01	0.106	+			6402	AVVGPVGAGK	10	50	427.7584534371894	853.5023539411789	2	427.7578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVVGPVGAGK_	ABCC4|p.L883Wfs*7|2|0.22|ENSG00000125257|chr13:95083178-95083178|A/-|frameshift_variant;ABCC4|p.T775Rfs*21|1|0.09|ENSG00000125257|chr13:95161322-95161323|-/AGTATGTCTT|frameshift_variant;ABCC6|p.L780Wfs*31|1|0.44|ENSG00000091262|chr16:16178875-16178875|G/-|frameshift_variant;ENSG00000091262|ENST00000205557|ABCC6;ENSG00000125257|ENST00000645237|ABCC4;nc|ENSG00000091262|O95255-3|ABCC6;nc|ENSG00000125257|O15439-2|ABCC4;nc|ENSG00000125257|O15439-3|ABCC4;nc|ENSG00000125257|O15439-4|ABCC4	53.351449002276354	0.42630798468005626	3				NaN	NaN	0	NaN	3003	3458	6458
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6464	22.125	NaN	1693	30	0	312.56	0.034	+			43430	TGKTKEQI	8	51	452.7579135376272	903.5012741420544	2	453.2559509277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TGKTKEQI_	tr|U7T1I1|U7T1I1_FUSNUATP-dependentClpproteaseproteolyticsubunitOS=FusobacteriumnucleatumCTI-5OX=1316586GN=clpPPE=3SV=1	30.317721548370564	0.7252424349988982	3				NaN	NaN	0	NaN	3004	3458	6458
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6465	22.126	NaN	2062.1	30	0	249.61	0.138	+			46215	VEAGHTATL	9	50	449.73532482420825	897.4560967152165	2	449.7347106933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VEAGHTATL_	ENSG00000142798|ENST00000374695|HSPG2	71.29570347882199	0.13518600952103718	3				NaN	NaN	0	NaN	3005	3458	6458
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6475	22.149	NaN	33887	30	0	15156	0.214			+	34970	SAANETPRW	9	66	344.5018229615399	1030.4836394848198	3	344.5015563964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAANETPRW_	REV__chr19:38264998-38289138|102|14.38|0.53|4.76|+|0|SPINT2,SPINT2|1;REV__ENST00000301244.11_1_19:38755599-38774395:+|nuORF	39.252832667884924	0.4290233611298554	3				NaN	NaN	0	NaN	3012	3461	6474
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6476	22.153	NaN	2099.4	30	0	179.02	0.106	+			23251	KYIQRQETI	9	61	589.8305880253446	1177.646623117489	2	589.830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KYIQRQETI_	ENSG00000157601|ENST00000398598|MX1;MX1|p.G282Afs*9|1|0.29|ENSG00000157601|chr21:41441827-41441827|G/-|frameshift_variant;MX1|p.M372Cfs*4|1|0.37|ENSG00000157601|chr21:41445548-41445548|A/-|frameshift_variant;nc|ENSG00000157601|P20591-2|MX1	115.49404669440601	0.023927554121326553	3				NaN	NaN	0	NaN	3013	3461	6474
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6477	22.155	NaN	2839.3	30	0	877.07	0.106	+			30606	QARAAVDTY	9	56	497.75176439404663	993.4889758548933	2	497.7511291503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QARAAVDTY_	ENSG00000196126|ENST00000360004|HLA-DRB1	51.33545320467046	0.2872990594074956	3				NaN	NaN	0	NaN	3014	3461	6474
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6478	22.157	NaN	1705.5	30	0	161.3	0.106			+	24365	LFPRNEVKV	9	57	551.3224565054848	NaN	0	551.3228149414062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LFPRNEVKV_	REV__ENSG00000182667|ENST00000683400|NTM;REV__ENST00000474900.5_1_11:132180116-132205037:+|nuORF;REV__nc|ENSG00000182667|Q9P121-2|NTM;REV__nc|ENSG00000182667|Q9P121-3|NTM;REV__nc|ENSG00000182667|Q9P121-4|NTM;REV__nc|ENSG00000182667|Q9P121|NTM	39.252832667884924	0.27938773122138094	3				NaN	NaN	0	NaN	3015	3461	6474
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6479	22.159	NaN	1711.5	30	0	186.83	0.106	+			6904	CLTQMSLFA	9	31	338.498544074848	1012.473802824744	3	338.4983825683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_CLTQMSLFA_	ENST00000463158.1_1_3:125431174-125431342:+|nuORF	34.172542307311794	0.4838870758800184	3				NaN	NaN	0	NaN	3016	3461	6474
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6480	22.16	NaN	2053	30	0	311.52	0.035	+			3691	ATAAAIGATPR	11	59	500.28276035179357	NaN	0	500.2828369140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATAAAIGATPR_	ENSG00000137497|ENST00000393695|NUMA1;ENST00000540626.5_1_11:71714575-71718510:-|nuORF;nc|ENSG00000137497|Q14980-2|NUMA1;nc|ENSG00000137497|Q14980-5|NUMA1	66.96192283764107	0.16598004834628655	3				NaN	NaN	0	NaN	3017	3461	6474
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6481	22.161	NaN	1264.7	30	0	158.68	0.139			+	488	AAYGPAPYL	9	51	461.7353384136403	921.4561238940806	2	461.7346496582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AAYGPAPYL_	REV__AP5Z1|p.Q696Rfs*6|3|0.43|ENSG00000242802|chr7:4790814-4790814|C/-|frameshift_variant;REV__ENSG00000242802|ENST00000649063|AP5Z1;REV__ENST00000469614.1_1_7:4828357-4829561:+|nuORF;REV__ENST00000477680.5_1_7:4815294-4829561:+|nuORF;REV__ENST00000490487.1_1_7:4829477-4830874:+|nuORF;REV__ENST00000496303.5_1_7:4815289-4829878:+|nuORF;REV__nc|ENSG00000242802|O43299-2|AP5Z1;REV__nc|ENSG00000242802|O43299-3|AP5Z1	29.841539824830324	0.5243625958137083	3				NaN	NaN	0	NaN	3018	3461	6474
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6490	22.183	NaN	9971.8	30	0	3004.7	0.214				-1	STLTIFRFCG	10	53	401.2050661903507	1200.593369171252	3	401.20440673828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_STLTIFRFC(Carbamidomethyl (C))G_	ENST00000510398.1_1_4:5141502-5170068:+|nuORF;ENST00000512018.5_1_4:5053633-5141954:+|nuORF;STK32B|p.V11Cfs*41|1|0.29|ENSG00000152953|chr4:5051888-5051888|C/-|frameshift_variant	42.86426827375447	0.522752283233888	3				NaN	NaN	0	NaN	3024	3464	6489
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6491	22.186	NaN	5282.6	30	0	544.51	0.106	+			34166	RTATIMIQK	9	76	531.3107410598958	1060.6069291865915	2	531.31103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RTATIMIQK_	ENSG00000167306|ENST00000285039|MYO5B	101.25262130126117	0.03792372629710479	3				NaN	NaN	0	NaN	3025	3464	6489
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6492	22.188	NaN	4494.5	30	0	525.7	0.106	+			26489	LTLTKTIAN	9	63	487.7979416453145	973.581330357429	2	487.7971496582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LTLTKTIAN_	nc|ENSG00000180953|Q9HBF5|ST20	56.43379154798735	0.2433427591689151	3				NaN	NaN	0	NaN	3026	3464	6489
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6493	22.19	NaN	4397.7	30	0	1351.7	0.106			+	18074	IKFKKSSNQ	9	49	360.54551361306085	1078.6147114393825	3	360.5450439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IKFKKSSNQ_	REV__ENSG00000165072|ENST00000377182|MAMDC2;REV__MAMDC2|p.F586Sfs*12|1|0.2|ENSG00000165072|chr9:70218438-70218438|T/-|frameshift_variant	31.529811441608018	0.5085848003137583	3				NaN	NaN	0	NaN	3027	3464	6489
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6494	22.192	NaN	2746.2	30	0	182	0.106	+			46832	VIEHIQVNK	9	63	540.314497266669	1078.614441600138	2	540.3143920898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VIEHIQVNK_	ENSG00000265681|ENST00000580261|RPL17;ENST00000394133.2_1_10:95043842-95044274:-|nuORF;ENST00000414070.1_1_1:109535017-109535455:+|nuORF;ENST00000446498.1_1_1:26781156-26781564:-|nuORF;nc|ENSG00000265681|P18621-2|RPL17;nc|ENSG00000265681|P18621-3|RPL17	104.0567914643314	0.03506238181059741	3				NaN	NaN	0	NaN	3028	3464	6489
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6495	22.194	NaN	3122.2	30	0	278.84	0.038	+			34477	RVCDAVKALK	10	60	387.22577254463164	1158.655488234095	3	387.2253112792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_RVC(Carbamidomethyl (C))DAVKALK_	ENSG00000023697|ENST00000428559|DERA;ENST00000528821.5_1_12:16109876-16185684:+|nuORF	60.1669710687717	0.3643216362415131	3				NaN	NaN	0	NaN	3029	3464	6489
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6496	22.194	NaN	1616.3	30	0	587.13	0.139	+			23369	KYYKGSLS	8	52	473.2530933961187	NaN	0	473.2530822753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KYYKGSLS_	ENSG00000117984|ENST00000236671|CTSD;ENST00000497544.2_2_11:1775127-1776230:-|nuORF	30.503639358989545	1.7418937515398478	3				NaN	NaN	0	NaN	3030	3464	6489
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6501	22.21	NaN	3829	30	0	1071.3	0.214			+	8060	DVGNGTVQAI	10	60	487.25134780151603	972.4881426698321	2	487.25103759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DVGNGTVQAI_	REV__DCHS1|p.D2302G|1|0.05|ENSG00000166341|chr11:6625439-6625439|T/C|missense_variant	42.86426827375447	0.522752283233888	3				NaN	NaN	0	NaN	3032	3467	6500
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6502	22.214	NaN	3602.6	30	0	551.96	0.106	+			13196	GIASSSIAAK	10	57	452.7579135376272	903.5012741420544	2	452.7584533691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GIASSSIAAK_	ENSG00000165949|ENST00000612813|IFI27;nc|ENSG00000165949|P40305-1|IFI27;nc|ENSG00000165949|P40305-3|IFI27;nc|ENSG00000165949|P40305-4|IFI27	41.42661286455405	0.5359995577334734	3				NaN	NaN	0	NaN	3033	3467	6500
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6503	22.216	NaN	6019.8	30	0	1147.8	0.106			+	18304	IPRCCAQGVK	10	61	537.7812214709141	1073.5478900086282	2	537.7817993164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IPRCCAQGVK_	REV__ENSG00000168621|ENST00000326524|GDNF;REV__nc|ENSG00000168621|P39905-2|GDNF;REV__nc|ENSG00000168621|P39905-3|GDNF;REV__nc|ENSG00000168621|P39905-4|GDNF;REV__nc|ENSG00000168621|P39905-5|GDNF	44.116797842482775	0.5112108506279902	3				NaN	NaN	0	NaN	3034	3467	6500
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6504	22.218	NaN	2682	30	0	340.53	0.106	+			12176	GAMEHFHMK	9	60	544.2441822193907	1086.4738115055814	2	544.2451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GAMEHFHMK_	ENSG00000185825|ENST00000345046|BCAP31;nc|ENSG00000185825|P51572-2|BCAP31	88.17693792209575	0.07000514020414955	3				NaN	NaN	0	NaN	3035	3467	6500
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6505	22.219	NaN	1176.1	30	0	156.98	0.106	+			31519	QLHARTRP	8	52	489.7845592616552	NaN	0	489.7847900390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QLHARTRP_	ENST00000451251.5_1_1:249152755-249153022:-|nuORF	45.9519527083369	1.7418937515398478	3				NaN	NaN	0	NaN	3036	3467	6500
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6506	22.221	NaN	5360.2	30	0	1958.3	0.106			+	37593	SLPGVSHVE	9	50	462.74365962090604	923.4727663086121	2	462.7430725097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLPGVSHVE_	REV__EPHA8|p.R171H|1|0.25|ENSG00000070886|chr1:22576569-22576569|G/A|missense_variant	45.9519527083369	0.35044536499095585	3				NaN	NaN	0	NaN	3037	3467	6500
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6507	22.223	NaN	753.75	30	0	97.172	0.037	+			11442	FMAYLYPLQ	9	43	573.2870483398438	NaN	0	573.2870483398438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FMAYLYPLQ_	DENND3|p.L310Sfs*31|1|0.4|ENSG00000105339|chr8:141155938-141155938|C/-|frameshift_variant;ENSG00000105339|ENST00000519811|DENND3;nc|ENSG00000105339|A2RUS2-2|DENND3;nc|ENSG00000105339|A2RUS2|DENND3	24.20275056022122	0.35506675290109213	3				NaN	NaN	0	NaN	3038	3467	6500
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6516	22.243	NaN	7907.1	30	0	3374.2	0.214	+			945	AEIRVHTV	8	53	462.76660588122934	923.5186588292587	2	462.766357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEIRVHTV_	ENSG00000135624|ENST00000258091|CCT7;nc|ENSG00000135624|Q99832-2|CCT7;nc|ENSG00000135624|Q99832-3|CCT7;nc|ENSG00000135624|Q99832-4|CCT7	54.776311868738084	0.5534952410049249	3				NaN	NaN	0	NaN	3044	3470	6515
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6517	22.246	NaN	3218.8	30	0	631.74	0.106	+			45672	VAAAESHPL	9	54	447.7378405112934	893.4611280893869	2	447.7373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VAAAESHPL_	ENST00000416120.1_1_6:64259201-64259360:-|nuORF;ENST00000489392.1_1_9:136216448-136216496:+|nuORF	88.64286706044652	0.06869153472052109	3				NaN	NaN	0	NaN	3045	3470	6515
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6518	22.248	NaN	2237.5	30	0	369.35	0.106	+			9231	EGTEGEATEGL	11	53	546.7388162276611	NaN	0	546.73828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EGTEGEATEGL_	ENSG00000011243|ENST00000397410|AKAP8L;ENST00000593845.5_1_19:15510111-15529746:-|nuORF;ENST00000594893.5_1_19:15511079-15529746:-|nuORF;ENST00000598292.1_1_19:15511553-15512083:-|nuORF;nc|ENSG00000011243|Q9ULX6-2|AKAP8L	40.77816245573522	0.38155341215020716	3				NaN	NaN	0	NaN	3046	3470	6515
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6519	22.25	NaN	1943.3	30	0	333.23	0.106	+			36675	SGMQNMSIHTK	11	46	411.86230893035736	1232.565097391272	3	411.8620300292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SGMQNMSIHTK_	CON__H-INV:HIT000292931;CON__P05787;CON__REFSEQ:XP_092267;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	53.01288593483079	0.3858247291064905	3				NaN	NaN	0	NaN	3047	3470	6515
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6520	22.252	NaN	749.59	30	0	183.71	0.106	+			5365	ATWMGKIHSK	10	44	579.8076677040432	NaN	0	579.8073120117188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATWMGKIHSK_	ENSG00000124299|ENST00000244137|PEPD;ENST00000570572.1_1_17:53638398-53638659:-|nuORF;nc|ENSG00000124299|P12955-2|PEPD	29.170058357718403	0.40439580130713204	3				NaN	NaN	0	NaN	3048	3470	6515
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6521	22.254	NaN	1436.9	30	0	106.64	0.035			+	6838	CIILLTSEP	9	53	494.7747802734375	NaN	0	494.7747802734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_CIILLTSEP_	REV__ENSG00000206530|ENST00000393845|CFAP44;REV__nc|ENSG00000206530|Q96MT7-1|CFAP44	55.50420428727701	0.16876052142120426	3				NaN	NaN	0	NaN	3049	3470	6515
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6522	22.254	NaN	1020.1	30	0	83.319	0.14	+			43920	TPAEVSHRF	9	50	522.2676054249076	1042.5206579166152	2	522.2667846679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TPAEVSHRF_	ENSG00000116580|ENST00000368331|GON4L;ENST00000473267.1_1_1:155720377-155721671:-|nuORF;nc|ENSG00000116580|Q3T8J9-3|GON4L	38.753607047826485	0.4348790777924195	3				NaN	NaN	0	NaN	3050	3470	6515
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6530	22.274	NaN	31036	30	0	7134.1	0.214	+			38180	SQCGSLIGK	9	77	475.2425248626263	948.4704967920526	2	475.241943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SQC(Carbamidomethyl (C))GSLIGK_	ENSG00000090097|ENST00000461554|PCBP4;ENSG00000183570|ENST00000681687|PCBP3;ENSG00000197111|ENST00000546463|PCBP2;ENST00000468429.5_1_21:47321003-47359956:+|nuORF;ENST00000492809.5_1_3:51992079-51994784:-|nuORF;ENST00000497390.5_1_3:51992079-51994784:-|nuORF;ENST00000547717.1_1_12:53848575-53861193:+|nuORF;ENST00000548190.1_1_12:53849722-53854210:+|nuORF;nc|ENSG00000090097|P57723-2|PCBP4;nc|ENSG00000183570|P57721-2|PCBP3;nc|ENSG00000183570|P57721-3|PCBP3;nc|ENSG00000183570|P57721-4|PCBP3;nc|ENSG00000183570|P57721-5|PCBP3;nc|ENSG00000197111|Q15366-2|PCBP2;nc|ENSG00000197111|Q15366-4|PCBP2;nc|ENSG00000197111|Q15366-5|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;nc|ENSG00000197111|Q15366-7|PCBP2;nc|ENSG00000197111|Q15366-8|PCBP2;nc|ENSG00000197111|Q15366|PCBP2;PCBP2|p.T202Kfs*26|1|0.32|ENSG00000197111|chr12:53464773-53464773|C/-|frameshift_variant;PCBP4|p.G203Efs*11|1|0.1|ENSG00000090097|chr3:51959397-51959398|-/CTCT|frameshift_variant	114.85826248499774	0.024312442104607014	3				NaN	NaN	0	NaN	3055	3473	6529
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6531	22.278	NaN	7928.8	30	0	4244.8	0.106	+			30256	PTAAPRDLPP	10	36	345.5246052745558	1033.5519864238674	3	345.5246887207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PTAAPRDLPP_	ENSG00000189114|ENST00000433642|BLOC1S3	28.081489160057373	0.6505064946289502	3				NaN	NaN	0	NaN	3056	3473	6529
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6532	22.28	NaN	2743	30	0	353.79	0.106	+			51027	YKLSHSLVV	9	65	523.3033222407962	1044.5920915483923	2	523.30419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YKLSHSLVV_	ENST00000560958.1_1_15:83395247-83395832:-|nuORF	40.77816245573522	0.41113185337114944	3				NaN	NaN	0	NaN	3057	3473	6529
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6533	22.282	NaN	2272.6	30	0	244.36	0.106	+			46425	VERGPDEAM	9	64	502.2297128057101	1002.4448726782202	2	502.22918701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VERGPDEAM_	ENSG00000024422|ENST00000263277|EHD2;ENST00000540884.1_1_19:48232905-48244686:+|nuORF;nc|ENSG00000024422|Q9NZN4-2|EHD2	45.97224482568171	0.3502073465782774	3				NaN	NaN	0	NaN	3058	3473	6529
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6534	22.283	NaN	3356.8	30	0	301.39	0.106	+			35299	SAMERICEK	9	63	533.7550885052443	1065.4956240772885	2	533.7553100585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SAMERICEK_	ENSG00000169710|ENST00000306749|FASN;FASN|p.A2037V|1|0.35|ENSG00000169710|chr17:82082062-82082062|G/A|missense_variant;FASN|p.R2049Q|1|0.55|ENSG00000169710|chr17:82082026-82082026|C/T|missense_variant	86.88156770896713	0.07365720931774442	3				NaN	NaN	0	NaN	3059	3473	6529
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6535	22.285	NaN	4772.6	30	0	470.01	0.106	+			30188	PSLELGHW	8	62	469.73853096254015	937.4625089918803	2	469.7379455566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PSLELGHW_	nc|ENSG00000169905|Q9H496|TOR1AIP2	37.028477286268924	0.6747514403204248	3				NaN	NaN	0	NaN	3060	3473	6529
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6536	22.287	NaN	2888.3	30	0	558.3	0.034	+			35317	SAMSNPRAM	9	55	482.7205763632748	963.4265997933496	2	482.72039794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SAMSNPRAM_	ENSG00000135018|ENST00000376395|UBQLN1;ENSG00000188021|ENST00000338222|UBQLN2;nc|ENSG00000135018|Q9UMX0-2|UBQLN1;nc|ENSG00000135018|Q9UMX0-3|UBQLN1;UBQLN2|p.P525Lfs*71|10|0.37|ENSG00000188021|chrX:56565441-56565441|C/-|frameshift_variant	78.26377905018397	0.10505600812668463	3				NaN	NaN	0	NaN	3061	3473	6529
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6546	22.309	NaN	12362	30	0	1278.7	0.214	+			1768	AIASTLVHK	9	70	470.28493744255184	938.5553219519037	2	470.2843933105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AIASTLVHK_	ENSG00000090060|ENST00000216277|PAPOLA;nc|ENSG00000090060|P51003-2|PAPOLA	98.62937762414208	0.04060045538121712	3				NaN	NaN	0	NaN	3068	3476	6545
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6547	22.312	NaN	13314	30	0	4278.4	0.106				-1	 	0	75	362.7593315271666	723.5041101211332	2	362.75897216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3069	3476	6545
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6548	22.314	NaN	5929.9	30	0	759.98	0.106	+			46354	VEKPVGVAA	9	66	435.25859357259	868.50263421198	2	435.25823974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VEKPVGVAA_	ENSG00000131149|ENST00000253458|GSE1;ENST00000562659.1_1_16:85698640-85699994:+|nuORF;GSE1|p.P1093Qfs*45|1|0.45|ENSG00000131149|chr16:85668282-85668282|C/-|frameshift_variant;nc|ENSG00000131149|Q14687-2|GSE1;nc|ENSG00000131149|Q14687-3|GSE1	42.396135135203025	0.392153681582562	3				NaN	NaN	0	NaN	3070	3476	6545
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6549	22.316	NaN	2469.8	30	0	261.85	0.106	+			36381	SETHKAIQAL	10	63	549.3016072779241	1096.588661622648	2	549.3011474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SETHKAIQAL_	ENSG00000179950|ENST00000526683|PUF60;nc|ENSG00000179950|Q9UHX1-2|PUF60;nc|ENSG00000179950|Q9UHX1-3|PUF60;nc|ENSG00000179950|Q9UHX1-4|PUF60;nc|ENSG00000179950|Q9UHX1-5|PUF60;nc|ENSG00000179950|Q9UHX1-6|PUF60	77.53327743719008	0.21577387331637743	3				NaN	NaN	0	NaN	3071	3476	6545
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6550	22.318	NaN	2062.7	30	0	516.89	0.106	+			12687	GEKGISTPR	9	52	472.7610539002187	NaN	0	472.7608642578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GEKGISTPR_	nc|ENSG811|Q9UKH3|ERVK-9_env;nc|ENSG821|P63135|ERVK-7_pol;nc|ENSG825|Q69384|ERVK-6_env;nc|ENSG830|Q9HDB8|ERVK-5_env;nc|ENSG833|P61570|ERVK-25_env;nc|ENSG836|P61566|ERVK-24_env;nc|ENSG840|P61565|ERVK-21_env;nc|ENSG845|O71037|ERVK-19_env	37.81151784470057	0.28666463014928195	3				NaN	NaN	0	NaN	3072	3476	6545
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6551	22.32	NaN	1516.6	30	0	94.897	0.106	+			38752	SSLQEVYHK	9	55	545.7805024802724	1089.5464520273447	2	545.7810668945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSLQEVYHK_	ENSG00000143106|ENST00000271308|PSMA5;nc|ENSG00000143106|P28066-2|PSMA5	58.22992032128504	0.22837015374068087	3				NaN	NaN	0	NaN	3073	3476	6545
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6552	22.321	NaN	1259.5	30	0	72.676	0.032	+			20	AAAGGAFRP	9	38	409.2200803384047	816.4256077436095	2	409.21954345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AAAGGAFRP_	ENSG00000106004|ENST00000222726|HOXA5;ENST00000520854.1_1_7:27181456-27182390:-|nuORF	88.64286706044652	0.06869153472052109	3				NaN	NaN	0	NaN	3074	3476	6545
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6557	22.336	NaN	4833.8	30	0	686.14	0.214	+			3382	ASQCGSLIGK	10	64	510.76077047826465	1019.5069880233293	2	510.76080322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_ASQC(Carbamidomethyl (C))GSLIGK_	ENSG00000090097|ENST00000461554|PCBP4;ENSG00000183570|ENST00000681687|PCBP3;ENSG00000197111|ENST00000546463|PCBP2;ENST00000468429.5_1_21:47321003-47359956:+|nuORF;ENST00000492809.5_1_3:51992079-51994784:-|nuORF;ENST00000497390.5_1_3:51992079-51994784:-|nuORF;ENST00000547717.1_1_12:53848575-53861193:+|nuORF;ENST00000548190.1_1_12:53849722-53854210:+|nuORF;nc|ENSG00000090097|P57723-2|PCBP4;nc|ENSG00000183570|P57721-2|PCBP3;nc|ENSG00000183570|P57721-3|PCBP3;nc|ENSG00000183570|P57721-4|PCBP3;nc|ENSG00000183570|P57721-5|PCBP3;nc|ENSG00000197111|Q15366-2|PCBP2;nc|ENSG00000197111|Q15366-4|PCBP2;nc|ENSG00000197111|Q15366-5|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;nc|ENSG00000197111|Q15366-7|PCBP2;nc|ENSG00000197111|Q15366-8|PCBP2;nc|ENSG00000197111|Q15366|PCBP2;PCBP2|p.T202Kfs*26|1|0.32|ENSG00000197111|chr12:53464773-53464773|C/-|frameshift_variant;PCBP4|p.G203Efs*11|1|0.1|ENSG00000090097|chr3:51959397-51959398|-/CTCT|frameshift_variant	106.88024417677582	0.05726438866303799	3				NaN	NaN	0	NaN	3076	3479	6556
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6558	22.339	NaN	6260.7	30	0	3074.6	0.106	+			38238	SQLLRESY	8	67	498.26187743806145	994.5092019429229	2	498.26141357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SQLLRESY_	ENSG00000138347|ENST00000358913|MYPN;MYPN|p.I891*|1|0.12|ENSG00000138347|chr10:68175423-68175423|A/-|frameshift_variant;MYPN|p.K575Nfs*9|1|0.23|ENSG00000138347|chr10:68166410-68166410|C/-|frameshift_variant	56.72105179125745	0.5342425954139568	3				NaN	NaN	0	NaN	3077	3479	6556
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6559	22.341	NaN	3654.3	30	0	380.93	0.106	+			35869	SEDPSHPSM	9	66	493.6982760980367	985.3819992628734	2	493.6976318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEDPSHPSM_	ENSG00000111642|ENST00000544040|CHD4;nc|ENSG00000111642|Q14839-2|CHD4	37.15910966729921	0.4535818937225704	3				NaN	NaN	0	NaN	3078	3479	6556
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6560	22.343	NaN	1507	30	0	165.29	0.106			+	11168	FGPKPAAP	8	46	392.72139910259034	NaN	0	392.72113037109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FGPKPAAP_	REV__ENST00000367137.3_1_1:205779635-205779698:-|nuORF	37.028477286268924	1.7418937515398478	3				NaN	NaN	0	NaN	3079	3479	6556
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6561	22.345	NaN	1253	30	0	256.74	0.106			+	18597	ISQLGQSTF	9	54	490.7561785083804	979.4978040835608	2	490.7555236816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ISQLGQSTF_	REV__ENSG00000078900|ENST00000378295|TP73;REV__nc|ENSG00000078900|O15350-11|TP73;REV__nc|ENSG00000078900|O15350-6|TP73;REV__nc|ENSG00000078900|O15350-8|TP73	49.536043120802724	0.308405419312776	3				NaN	NaN	0	NaN	3080	3479	6556
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6562	22.347	NaN	1476.8	30	0	222.68	0.106	+			26583	LTTSHENI	8	53	457.73273018385606	913.4509074345121	2	457.7320861816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LTTSHENI_	ENST00000521704.1_1_8:124792721-124796858:+|nuORF	63.30626980617807	0.4690498839812213	3				NaN	NaN	0	NaN	3081	3479	6556
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6563	22.348	NaN	974.27	30	0	150.81	0.036				-1	NLPPGSLVML	10	31	352.8634893821603	NaN	0	352.5290222167969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_NLPPGSLVM(Oxidation (M))L_	ENSG00000166750|ENST00000299977|SLFN5	30.317721548370564	0.4006274431774794	3				NaN	NaN	0	NaN	3082	3479	6556
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6573	22.37	NaN	7490.2	30	0	1820.2	0.214	+			5829	AVIGNVQEK	9	62	479.2721663598653	956.5297797865306	2	479.2715148925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVIGNVQEK_	ENSG00000124786|ENST00000644923|SLC35B3;nc|ENSG00000124786|Q9H1N7-3|SLC35B3	109.47833844074708	0.029530294723441826	3				NaN	NaN	0	NaN	3089	3482	6572
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6574	22.374	NaN	9710.9	30	0	2858.5	0.106			+	26891	LWRVPFATQ	9	67	373.2101605812227	1116.608652343868	3	373.54400634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LWRVPFATQ_	REV__ENST00000432460.1_3_2:219523811-219524039:-|nuORF;REV__ENST00000450765.5_1_2:219523811-219524298:-|nuORF	31.529811441608018	0.5085848003137583	3				NaN	NaN	0	NaN	3090	3482	6572
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6575	22.376	NaN	8067.7	30	0	3881.7	0.106	+			47029	VLCPPPVKK	9	48	327.53695014664333	979.5890210401301	3	327.53680419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VLCPPPVKK_	ENSG00000136238|ENST00000348035|RAC1;ENSG00000169750|ENST00000306897|RAC3;ENST00000419413.1_1_X:136523419-136523611:-|nuORF;ENST00000488373.5_1_7:6415539-6442074:+|nuORF;nc|ENSG00000136238|P63000-2|RAC1	87.75429964447693	0.0711966946989736	3				NaN	NaN	0	NaN	3091	3482	6572
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6576	22.377	NaN	6482.5	30	0	3669.9	0.106	+			24615	LGRVSLELHI	10	38	379.5641899732353	NaN	0	379.5642395019531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LGRVSLELHI_	ENSG00000125450|ENST00000245544|NUP85;ENST00000578830.5_1_17:73221901-73228130:+|nuORF;ENST00000581104.5_1_17:73208151-73231006:+|nuORF;nc|ENSG00000125450|Q9BW27-2|NUP85;nc|ENSG00000125450|Q9BW27-3|NUP85	35.15202426646627	0.38475398474706135	3				NaN	NaN	0	NaN	3092	3482	6572
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6577	22.379	NaN	5650.2	30	0	1898.9	0.106			+	25910	LSGLTNHTY	9	59	503.25343658347225	1004.4923202337445	2	503.2531433105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSGLTNHTY_	REV__ENSG00000198886|ENST00000361381|MT-ND4	49.44154591367651	0.3095138337212152	3				NaN	NaN	0	NaN	3093	3482	6572
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6578	22.381	NaN	2173.5	30	0	328.16	0.106	+			41241	SVLGKDEQINK	11	72	615.8382474183496	1229.6619419034992	2	615.8383178710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVLGKDEQINK_	ENSG00000197579|ENST00000360538|TOPORS;nc|ENSG00000197579|Q9NS56-2|TOPORS	105.16503226865211	0.050009141116738	3				NaN	NaN	0	NaN	3094	3482	6572
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6579	22.383	NaN	1291.9	30	0	118.66	0.036				-1	ADMMGQLRR	9	51	547.2637329101562	NaN	0	547.2637329101562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_ADM(Oxidation (M))MGQLRR_	ENSG00000172425|ENST00000302783|TTC36;ENST00000533501.5_1_11:118398735-118401628:+|nuORF;nc|ENSG00000172425|A6NLP5-2|TTC36	35.61828744233558	0.29773779453147337	3				NaN	NaN	0	NaN	3095	3482	6572
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6595	22.415	NaN	8648.8	30	0	788.41	0.214				-1	 	0	76	494.2593487077614	986.5041444823228	2	494.258544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3108	3485	6594
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6596	22.419	NaN	3057.8	30	0	620.24	0.106				-1	 	0	50	384.7258918412761	767.4372307493522	2	384.7252502441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3109	3485	6594
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6597	22.421	NaN	3104.1	30	0	775.06	0.106	+			12292	GCGGPLVGK	9	53	394.2106395829593	786.4067262327186	2	394.2099914550781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GCGGPLVGK_	ENST00000331889.10_1_3:32726697-32726778:+|nuORF	57.81127852772723	0.2318599694398087	3				NaN	NaN	0	NaN	3110	3485	6594
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6598	22.423	NaN	3643.4	30	0	615.61	0.106	+			11523	FPEEDKKTY	9	65	578.7803610505769	1155.5461691679536	2	578.7798461914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FPEEDKKTY_	ENSG00000151366|ENST00000281031|NDUFC2;nc|ENSG00000151366|O95298-2|NDUFC2	150.36159442982594	0.006784847064083231	3				NaN	NaN	0	NaN	3111	3485	6594
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6599	22.424	NaN	5577.5	30	0	1099.3	0.106	+			37050	SIRVTQKSYK	10	70	626.3570648703907	1250.6995768075813	2	626.3565063476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SIRVTQKSYK_	CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000550170.5_1_12:53294858-53298765:-|nuORF;KRT8|p.R18Gfs*56|1|0.24|ENSG00000170421|chr12:52904930-52904930|G/-|frameshift_variant;nc|ENSG00000170421|P05787-2|KRT8	82.83050618871818	0.17249597090446123	3				NaN	NaN	0	NaN	3112	3485	6594
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6600	22.426	NaN	2561.3	30	0	240.9	0.036	+			9994	ERLFPAAIPS	10	62	550.8067637536478	1099.5989745740956	2	550.80712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ERLFPAAIPS_	SVA_D_dup1229|chr17:30522805-30524227:+|1.675571116190744|0.476847412502663|1.81|481.0|16|2|sense	53.59686742100583	0.4240759338601513	3				NaN	NaN	0	NaN	3113	3485	6594
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6601	22.427	NaN	3316	30	0	374.06	0.14	+			29684	PGSHGITAM	9	52	435.71074688858175	869.4069408439635	2	435.7101745605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PGSHGITAM_	ENSG00000169398|ENST00000696786|PTK2;nc|ENSG00000169398|Q05397-2|PTK2;nc|ENSG00000169398|Q05397-5|PTK2;nc|ENSG00000169398|Q05397-6|PTK2;nc|ENSG00000169398|Q05397|PTK2;PTK2|p.P912Lfs*17|2|0.43|ENSG00000169398|chr8:140668399-140668399|G/-|frameshift_variant	30.503639358989545	0.5181749237905803	3				NaN	NaN	0	NaN	3114	3485	6594
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6612	22.452	NaN	12047	30	0	3628.8	0.214	+			28983	NSLGHGANTE	10	60	500.2287624194769	NaN	0	500.2288818359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NSLGHGANTE_	ENST00000370082.1_1_20:62201547-62204491:-|nuORF;ENST00000479540.5_1_20:62201547-62202346:-|nuORF	29.170058357718403	0.40439580130713204	3				NaN	NaN	0	NaN	3122	3488	6611
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6613	22.456	NaN	6829	30	0	915.37	0.106				-1	 	0	69	537.3327275541394	1072.6509021750787	2	537.3323974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3123	3488	6611
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6614	22.458	NaN	18021	30	0	8900.2	0.106	+			15017	GTNFTKLEK	9	60	346.52596432544874	1036.5560635765462	3	346.5255432128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTNFTKLEK_	ENSG00000115514|ENST00000264255|TXNDC9	49.536043120802724	0.308405419312776	3				NaN	NaN	0	NaN	3124	3488	6611
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6615	22.46	NaN	5049.2	30	0	877.23	0.106	+			25919	LSGSLDGKL	9	66	445.25338222991985	888.4922115266397	2	445.2530212402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSGSLDGKL_	ENSG00000131725|ENST00000254029|WDR44;nc|ENSG00000131725|Q5JSH3-2|WDR44;nc|ENSG00000131725|Q5JSH3-3|WDR44;WDR44|p.R673C|1|0.31|ENSG00000131725|chrX:118441410-118441410|C/T|missense_variant	69.6276240434122	0.14239879520340665	3				NaN	NaN	0	NaN	3125	3488	6611
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6616	22.461	NaN	3212.9	30	0	512.56	0.106	+			50423	YAATSRQL	8	50	455.24330174871875	908.4720505642375	2	455.2430725097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YAATSRQL_	ENSG00000108846|ENST00000285238|ABCC3;ENST00000502426.5_1_17:48736553-48755440:+|nuORF;nc|ENSG00000108846|O15438-2|ABCC3;nc|ENSG00000108846|O15438-4|ABCC3	101.60071028292904	0.24979566554663588	3				NaN	NaN	0	NaN	3126	3488	6611
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6617	22.463	NaN	5588.1	30	0	1370.7	0.036	+			16922	HPLSDHEATL	10	56	560.2753979764822	1118.5362430197642	2	560.275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HPLSDHEATL_	ENSG00000204525|ENST00000376228|HLA-C;ENST00000487245.5_1_6:31236948-31239147:-|nuORF;HLA-C|p.A269Gfs*66|1|0.07|ENSG00000204525|chr6:31270299-31270300|-/C|frameshift_variant;nc|ENSG00000204525|P10321-2|HLA-C	93.19546047674547	0.11277922692270353	3				NaN	NaN	0	NaN	3127	3488	6611
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6618	22.464	NaN	4184.3	30	0	469.11	0.14	+			1613	AGMALGIQK	9	66	452.7502155347778	903.4858781363556	2	452.74951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_AGM(Oxidation (M))ALGIQK_	ENSG00000174851|ENST00000376901|YIF1A	106.41520541750704	0.03265588207292361	3				NaN	NaN	0	NaN	3128	3488	6611
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6627	22.487	NaN	34285	30	0	11983	0.214				-1	 	0	55	367.2245456803347	1098.6518076412042	3	367.22418212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3134	3491	6626
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6628	22.491	NaN	15445	30	0	3417.8	0.106	+			15042	GTNPGIITK	9	65	450.7614975681075	899.508442203015	2	450.7608947753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTNPGIITK_	ENSG00000136247|ENST00000335965|ZDHHC4;ENST00000474097.5_1_7:6620192-6623202:+|nuORF	125.71293069911285	0.017741295328254008	3				NaN	NaN	0	NaN	3135	3491	6626
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6629	22.493	NaN	4963.2	30	0	2494.6	0.106			+	13699	GPQLAVNRKV	10	49	361.2210761107495	1080.6413989324485	3	361.2207946777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GPQLAVNRKV_	REV__nc|ENSG00000134744|Q5TAX3-2|TUT4	42.86426827375447	0.522752283233888	3				NaN	NaN	0	NaN	3136	3491	6626
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6630	22.494	NaN	9040	30	0	3128.1	0.106	+			4208	ATFYGPVKK	9	41	337.52738344380595	1009.5603209316179	3	337.527099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATFYGPVKK_	ENSG00000036257|ENST00000264414|CUL3;ENST00000487558.1_1_2:225360464-225362517:-|nuORF;nc|ENSG00000036257|Q13618-2|CUL3;nc|ENSG00000036257|Q13618-3|CUL3	24.20275056022122	0.577060078256802	3				NaN	NaN	0	NaN	3137	3491	6626
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6631	22.496	NaN	4540	30	0	350.28	0.106			+	21049	KKKSNIIQQ	9	78	543.835310782195	1085.65606863119	2	543.8353881835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KKKSNIIQQ_	REV__ENSG00000186017|ENST00000452939|ZNF566;REV__nc|ENSG00000186017|Q969W8-2|ZNF566	69.6276240434122	0.14239879520340665	3				NaN	NaN	0	NaN	3138	3491	6626
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6632	22.498	NaN	3798.3	30	0	1072.8	0.038	+			11117	FFQDLKEET	9	51	386.189191690195	1155.545745670785	3	386.18865966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FFQDLKEET_	ENSG00000133816|ENST00000683283|MICAL2;ENST00000530691.5_1_11:12229562-12281716:+|nuORF;MICAL2|p.E821Kfs*48|1|0.07|ENSG00000133816|chr11:12242336-12242337|AG/-|frameshift_variant;MICAL2|p.K273N|1|0.34|ENSG00000133816|chr11:12213382-12213382|A/T|missense_variant;nc|ENSG00000133816|O94851-2|MICAL2;nc|ENSG00000133816|O94851-3|MICAL2;nc|ENSG00000133816|O94851-4|MICAL2;nc|ENSG00000133816|O94851-5|MICAL2;nc|ENSG00000133816|O94851-6|MICAL2;nc|ENSG00000133816|O94851|MICAL2	29.14955571784316	0.5308295550522326	3				NaN	NaN	0	NaN	3139	3491	6626
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6633	22.499	NaN	7809.2	30	0	1720	0.143				-1	LTCPPTKVYK	10	59	402.8903603770914	1205.6492517314741	3	402.8897705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_LTC(Carbamidomethyl (C))PPTKVYK_	ENSG00000117983|ENST00000529681|MUC5B	37.50817390946774	0.5721060100277453	3				NaN	NaN	0	NaN	3140	3491	6626
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6640	22.517	NaN	6552.9	30	0	1271.3	0.215	+			40946	SVFTSVRQK	9	76	526.2985003629009	1050.5824477926017	2	526.298583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVFTSVRQK_	ENSG00000127616|ENST00000344626|SMARCA4;ENST00000585799.5_1_19:11132109-11172489:+|nuORF;ENST00000591595.5_1_19:11130023-11172489:+|nuORF;ENST00000592604.5_1_19:11123597-11172489:+|nuORF;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;nc|ENSG00000127616|P51532-5|SMARCA4	136.26810882979174	0.012230845423532208	3				NaN	NaN	0	NaN	3144	3494	6639
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6641	22.52	NaN	3034.5	30	0	488.53	0.106	+			42106	SYKVSTSGP	9	51	463.235038560491	924.455524187782	2	463.234619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SYKVSTSGP_	CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000550170.5_1_12:53294858-53298765:-|nuORF;ENST00000562022.1_1_15:43093683-43094592:-|nuORF;KRT8|p.R18Gfs*56|1|0.24|ENSG00000170421|chr12:52904930-52904930|G/-|frameshift_variant;nc|ENSG00000170421|P05787-2|KRT8	96.0336014099291	0.047854655524928534	3				NaN	NaN	0	NaN	3145	3494	6639
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6642	22.522	NaN	5482.6	30	0	3595.1	0.106			+	9255	EGVPGPIGRLG	11	34	351.201501719392	1050.5826757583761	3	351.20123291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EGVPGPIGRLG_	REV__COL11A1|p.N1709Ifs*76|1|0.32|ENSG00000060718|chr1:102879831-102879831|T/-|frameshift_variant;REV__COL11A1|p.T1554Rfs*33|2|0.13|ENSG00000060718|chr1:102887005-102887005|T/-|frameshift_variant;REV__ENSG00000060718|ENST00000370096|COL11A1;REV__ENSG00000080573|ENST00000264828|COL5A3;REV__ENSG00000130635|ENST00000371817|COL5A1;REV__nc|ENSG00000060718|P12107-2|COL11A1;REV__nc|ENSG00000060718|P12107-3|COL11A1;REV__nc|ENSG00000060718|P12107-4|COL11A1;REV__nc|ENSG00000130635|P20908-2|COL5A1	20.94693142431847	0.7700749696703488	3				NaN	NaN	0	NaN	3146	3494	6639
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6643	22.524	NaN	2823	30	0	557.21	0.106	+			44139	TQCGSLIGK	9	54	482.2500741344919	962.4855953357838	2	482.24945068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_TQC(Carbamidomethyl (C))GSLIGK_	ENSG00000169564|ENST00000303577|PCBP1	43.650786325866115	0.37743712540499297	3				NaN	NaN	0	NaN	3147	3494	6639
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6644	22.526	NaN	3946.6	30	0	692.13	0.106	+			25870	LSFLRGEKFLS	11	66	432.9142389969645	1295.7208875910935	3	433.24798583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSFLRGEKFLS_	PRMT2|p.I57Ffs*4|1|0.47|ENSG00000160310|chr21:46644325-46644325|A/-|frameshift_variant	24.231819034082204	0.7356191775841856	3				NaN	NaN	0	NaN	3148	3494	6639
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6645	22.528	NaN	8901.8	30	0	1388.3	0.106				-1	 	0	63	475.75686935955844	949.4991857859169	2	475.7561950683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3149	3494	6639
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6646	22.53	NaN	2517.5	30	0	356.06	0.037	+			40929	SVFSDKLHSK	10	67	574.3091215685656	1146.6036902039311	2	574.3090209960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVFSDKLHSK_	ENSG00000187257|ENST00000334955|RSBN1L;nc|ENSG00000187257|Q6PCB5-2|RSBN1L;PTPN12-RSBN1L|1|fusion;PTPN12-RSBN1L|2|fusion;PTPN12-RSBN1L|3|fusion;PTPN12-RSBN1L|4|fusion;PTPN12-RSBN1L|5|fusion;PTPN12-RSBN1L|6|fusion;PTPN12-RSBN1L|7|fusion;PTPN12-RSBN1L|8|fusion	91.46909648831856	0.1226630089017797	3				NaN	NaN	0	NaN	3150	3494	6639
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6654	22.548	NaN	6153.3	30	0	656.25	0.214	+			42826	TEAVVKEKL	9	65	508.8032011601777	1015.5918493871554	2	508.80291748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEAVVKEKL_	ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1	129.42129120953632	0.01549634589885217	3				NaN	NaN	0	NaN	3155	3497	6653
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6655	22.551	NaN	3007.1	30	0	582.03	0.106	+			38931	SSQNAFMQK	9	54	520.7454244787657	1039.4762960243313	2	520.7455444335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSQNAFMQK_	ENST00000533415.5_1_17:45247369-45258963:-|nuORF	101.25262130126117	0.03792372629710479	3				NaN	NaN	0	NaN	3156	3497	6653
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6656	22.553	NaN	4270	30	0	746.32	0.106	+			34667	RVRQASVADYE	11	67	647.3315371164317	1292.6485212996633	2	647.3311767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RVRQASVADYE_	ALDH7A1|p.E507Gfs*5|1|0.1|ENSG00000164904|chr5:126546371-126546372|-/T|frameshift_variant;ENSG00000164904|ENST00000409134|ALDH7A1;nc|ENSG00000164904|P49419-2|ALDH7A1;nc|ENSG00000164904|P49419-4|ALDH7A1	37.81151784470057	0.5878881669006212	3				NaN	NaN	0	NaN	3157	3497	6653
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6657	22.555	NaN	4640.1	30	0	902.67	0.106	+			14073	GSLDAFLRK	9	57	503.7875885528203	NaN	0	503.78753662109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GSLDAFLRK_	ENSG00000116106|ENST00000281821|EPHA4;EPHA4|p.P846Sfs*25|1|0.19|ENSG00000116106|chr2:221430113-221430114|-/G|frameshift_variant;nc|ENSG00000116106|P54764-2|EPHA4	42.396135135203025	0.2590952873412954	3				NaN	NaN	0	NaN	3158	3497	6653
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6658	22.557	NaN	2381.9	30	0	245.11	0.106			+	12864	GEQPTTVKN	9	61	487.25134780151603	972.4881426698321	2	487.7525329589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GEQPTTVKN_	REV__ENSG00000061987|ENST00000393630|MON2;REV__ENST00000546751.1_1_12:62974148-62979324:+|nuORF;REV__ENST00000547095.5_1_12:62864501-62986526:+|nuORF;REV__ENST00000551307.5_1_12:62954224-62986526:+|nuORF;REV__nc|ENSG00000061987|Q7Z3U7-2|MON2;REV__nc|ENSG00000061987|Q7Z3U7-3|MON2;REV__nc|ENSG00000061987|Q7Z3U7-5|MON2;REV__nc|ENSG00000061987|Q7Z3U7-6|MON2	44.116797842482775	0.37197099687881774	3				NaN	NaN	0	NaN	3159	3497	6653
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6659	22.559	NaN	3018	30	0	415.68	0.106	+			35647	SCPGQSGET	9	70	433.17195859376295	864.3293642543259	2	433.1719055175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SCPGQSGET_	ENST00000353548.10_1_12:122692786-122692909:-|nuORF	34.172542307311794	0.4838870758800184	3				NaN	NaN	0	NaN	3160	3497	6653
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6660	22.561	NaN	1345.8	30	0	228.91	0.036	+			28602	NKPPKRYIP	9	53	556.8310876307183	1111.6476223282366	2	556.8309326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NKPPKRYIP_	CCDC66|p.V732*|1|0.25|ENSG00000180376|chr3:56617454-56617454|A/-|frameshift_variant;ENSG00000180376|ENST00000394672|CCDC66;ENST00000476142.1_1_3:56651192-56651654:+|nuORF;nc|ENSG00000180376|A2RUB6-3|CCDC66	30.503639358989545	0.5181749237905803	3				NaN	NaN	0	NaN	3161	3497	6653
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6668	22.579	NaN	11114	30	0	3232.7	0.214	+			15413	GTYHGMTLK	9	60	504.25276373206816	1006.4909745309363	2	504.25238037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTYHGMTLK_	ENSG00000134371|ENST00000367435|CDC73	95.81516180277367	0.04847050768394289	3				NaN	NaN	0	NaN	3166	3500	6667
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6669	22.582	NaN	6349.8	30	0	951.86	0.106	+			2909	ASAYSIAQK	9	64	469.75104023382505	937.4875275344501	2	469.7503662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASAYSIAQK_	ENSG00000162813|ENST00000322067|BPNT1;nc|ENSG00000162813|O95861-2|BPNT1;nc|ENSG00000162813|O95861-4|BPNT1	109.47833844074708	0.029530294723441826	3				NaN	NaN	0	NaN	3167	3500	6667
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6670	22.584	NaN	4752.8	30	0	1555.1	0.106	+			37968	SPHKGSYLY	9	69	526.2638258382387	1050.5130987432774	2	526.2643432617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SPHKGSYLY_	ENSG00000103089|ENST00000219368|FA2H;ENST00000562145.1_1_16:74748090-74750623:-|nuORF;nc|ENSG00000103089|Q7L5A8-2|FA2H	32.81241826257853	0.4965981579233955	3				NaN	NaN	0	NaN	3168	3500	6667
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6671	22.586	NaN	8053.2	30	0	4414.4	0.106			+	46945	VIYTLAAALVL	11	42	382.9088093820973	1145.704598746492	3	382.908447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VIYTLAAALVL_	REV__tr|U7SZI1|U7SZI1_FUSNUYfcCfamilyproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00762PE=4SV=1	17.364965105453717	0.789179815757669	3				NaN	NaN	0	NaN	3169	3500	6667
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6672	22.588	NaN	2113.4	30	0	343.7	0.106			+	19382	KALYILTW	8	37	336.53427245065865	NaN	0	336.53436279296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KALYILTW_	REV__ENST00000412278.2_3_11:66413513-66413711:+|nuORF	26.69291269510374	1.7418937515398478	3				NaN	NaN	0	NaN	3170	3500	6667
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6673	22.589	NaN	2425.1	30	0	389.88	0.036	+			33273	RGHILFESE	9	60	544.2806553931216	1086.5467578530431	2	545.2537231445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RGHILFESE_	nc|ENSG00000113971|Q7Z494-4|NPHP3	28.081489160057373	0.5408112046645406	3				NaN	NaN	0	NaN	3171	3500	6667
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6674	22.59	NaN	748.71	30	0	72.494	0.143	+			19149	IYNSQREHF	9	32	597.2887448676355	1192.562936802071	2	597.2894897460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IYNSQREHF_	ENSG00000197555|ENST00000381232|SIPA1L1;nc|ENSG00000197555|O43166-3|SIPA1L1;nc|ENSG00000197555|O43166|SIPA1L1	31.529811441608018	0.5085848003137583	3				NaN	NaN	0	NaN	3172	3500	6667
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6683	22.612	NaN	3081	30	0	493.45	0.214	+			34462	RTYVGSMPGR	10	74	562.2876982055229	1122.5608434778458	2	562.2879028320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTYVGSMPGR_	ENSG00000102910|ENST00000285737|LONP2;LONP2|p.D678Efs*7|1|0.07|ENSG00000102910|chr16:48347601-48347602|-/GT|frameshift_variant;nc|ENSG00000102910|Q86WA8-2|LONP2	114.8945686534367	0.03454040281423369	3				NaN	NaN	0	NaN	3178	3503	6682
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6684	22.615	NaN	2883.8	30	0	490.59	0.106	+			1060	AEKSEQPTL	9	56	501.7594653270561	1001.5043777209122	2	501.75897216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEKSEQPTL_	ENSG00000115368|ENST00000314761|WDR75;ENST00000436347.5_1_2:190313199-190340140:+|nuORF	61.691277971877994	0.19951612995419254	3				NaN	NaN	0	NaN	3179	3503	6682
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6685	22.617	NaN	2357.2	30	0	357.27	0.106	+			49457	VVVVNPQTK	9	57	492.2978789805014	982.5812050278029	2	492.2978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVVVNPQTK_	ENSG00000177733|ENST00000314940|HNRNPA0	65.46538089061403	0.16805504838372562	3				NaN	NaN	0	NaN	3180	3503	6682
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6686	22.619	NaN	2726.8	30	0	654.86	0.106			+	19842	KEEETEIPL	9	54	544.2806553931216	1086.5467578530431	2	544.28076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEEETEIPL_	REV__ENST00000266085.6_1_22:33257141-33257363:+|nuORF	52.936696900407355	0.27249468807391813	3				NaN	NaN	0	NaN	3181	3503	6682
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6687	22.621	NaN	3598.5	30	0	1454.9	0.106	+			5955	AVLKPGAWSRK	11	58	404.91252220703905	1211.715737221317	3	404.9123229980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVLKPGAWSRK_	ENST00000308521.9_1_22:39436844-39436913:+|nuORF	44.639436926238396	0.4944613868569842	3				NaN	NaN	0	NaN	3182	3503	6682
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6688	22.623	NaN	1366.5	30	0	199.26	0.035	+			50366	WVTEGLGIR	9	58	515.789431479181	NaN	0	515.7894287109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_WVTEGLGIR_	ENST00000474432.1_1_3:48604554-48604767:-|nuORF	56.72105179125745	0.16330365735109603	3				NaN	NaN	0	NaN	3183	3503	6682
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6689	22.623	NaN	1153.2	30	0	406.5	0.143			+	35227	SALDTLRKL	9	32	339.54118701750747	NaN	0	339.541259765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SALDTLRKL_	REV__ENSG00000196141|ENST00000409140|SPATS2L;REV__nc|ENSG00000196141|Q9NUQ6-2|SPATS2L;REV__nc|ENSG00000196141|Q9NUQ6-3|SPATS2L;REV__nc|ENSG00000196141|Q9NUQ6-4|SPATS2L	23.04248740728303	0.3589936788096251	3				NaN	NaN	0	NaN	3184	3503	6682
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6697	22.643	NaN	21574	30	0	4177.4	0.214	+			39090	SSSSVLINK	9	61	467.76409138437526	933.5136298355505	2	467.7635803222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSSSVLINK_	ENSG00000120278|ENST00000696526|PLEKHG1	195.06343300570734	5.420119182691198E-05	3				NaN	NaN	0	NaN	3189	3506	6696
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6698	22.647	NaN	7756	30	0	4263.1	0.106	+			10207	ETFSGVYKK	9	67	529.7795915790286	1057.5446302248572	2	529.7789916992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ETFSGVYKK_	ENSG00000171863|ENST00000645674|RPS7;ENST00000444127.1_1_1:68708159-68708657:-|nuORF;ENST00000484240.1_1_17:44798950-44799232:-|nuORF	60.11826168202944	0.21262886028301267	3				NaN	NaN	0	NaN	3190	3506	6696
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6699	22.649	NaN	8575.9	30	0	2136.2	0.106	+			17004	HPTDDTTTL	9	56	500.73332886984684	999.4521048064937	2	500.73211669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HPTDDTTTL_	ENSG00000089327|ENST00000392219|FXYD5;ENST00000591716.6_1_19:35651643-35657154:+|nuORF;nc|ENSG00000089327|Q96DB9-2|FXYD5	82.30502934623384	0.08758161712619916	3				NaN	NaN	0	NaN	3191	3506	6696
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6700	22.65	NaN	5488.8	30	0	3041.7	0.106	+			32612	QYNPHVHQL	9	62	568.2862817373281	1134.558010541456	2	568.2862548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QYNPHVHQL_	DLG5|p.F1661Ifs*9|1|0.12|ENSG00000151208|chr10:77805849-77805850|-/C|frameshift_variant;ENSG00000151208|ENST00000372391|DLG5;ENST00000459739.5_1_10:79567604-79581271:-|nuORF;ENST00000463362.5_1_10:79552200-79579794:-|nuORF;ENST00000475613.6_1_10:79552200-79579275:-|nuORF;nc|ENSG00000151208|Q8TDM6-2|DLG5;nc|ENSG00000151208|Q8TDM6-4|DLG5;nc|ENSG00000151208|Q8TDM6-5|DLG5	101.25262130126117	0.03792372629710479	3				NaN	NaN	0	NaN	3192	3506	6696
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6701	22.652	NaN	3618.6	30	0	319.08	0.106	+			36152	SEKVDRAVL	9	61	508.79083417964733	1015.5671154260947	2	508.79052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SEKVDRAVL_	ENSG00000123240|ENST00000378747|OPTN;nc|ENSG00000123240|Q96CV9-2|OPTN;nc|ENSG00000123240|Q96CV9-3|OPTN	66.96192283764107	0.15557981141143568	3				NaN	NaN	0	NaN	3193	3506	6696
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6702	22.654	NaN	1682.3	30	0	181.85	0.106			+	10255	ETLETIKK	8	55	481.2828271111403	960.5511012890806	2	481.28179931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ETLETIKK_	REV__ENSG00000178852|ENST00000331493|EFCAB13;REV__ENST00000520776.5_1_17:45405719-45473360:+|nuORF;REV__nc|ENSG00000178852|Q8IY85-2|EFCAB13	53.351449002276354	0.5676011784961348	3				NaN	NaN	0	NaN	3194	3506	6696
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6703	22.656	NaN	2252.1	30	0	246.82	0.035	+			46071	VCMLRYQK	8	60	520.7749130231841	1039.5352731131682	2	520.7747192382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VCMLRYQK_	APBB1|p.A653V|1|0.25|ENSG00000166313|chr11:6395793-6395793|G/A|missense_variant	60.29395666154354	0.49887135096048313	3				NaN	NaN	0	NaN	3195	3506	6696
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6712	22.676	NaN	8869.5	30	0	4363.3	0.214				-1	QMKEEDVLK	9	43	379.19332329003464	1134.558140470304	3	379.1929016113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_QM(Oxidation (M))KEEDVLK_	ENSG00000168028|ENST00000301821|RPSA;ENST00000477325.1_1_3:39449144-39450287:+|nuORF;ENST00000489520.2_1_12:66152652-66152778:-|nuORF;nc|ENSG00000288920|A0A8I5KQE6|RPSA2	34.172542307311794	0.4838870758800184	3				NaN	NaN	0	NaN	3201	3509	6711
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6713	22.679	NaN	4765.4	30	0	799.92	0.106	+			49373	VVSTVGMQR	9	66	488.7664611170565	975.518369300913	2	488.7657775878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVSTVGMQR_	CON__P35900;ENSG00000171431|ENST00000167588|KRT20	76.7741389293348	0.11149722112137898	3				NaN	NaN	0	NaN	3202	3509	6711
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6714	22.681	NaN	6227.4	30	0	1280.5	0.106	+			43646	TIRTIDYRK	9	47	389.2281937802164	1164.6627519408491	3	389.22772216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TIRTIDYRK_	ENSG00000162775|ENST00000369784|RBM15;nc|ENSG00000162775|Q96T37-2|RBM15;nc|ENSG00000162775|Q96T37-3|RBM15;nc|ENSG00000162775|Q96T37-4|RBM15;RBM15|p.G910Afs*41|1|0.42|ENSG00000162775|chr1:110342129-110342129|G/-|frameshift_variant;RBM15|p.P592Qfs*23|1|0.22|ENSG00000162775|chr1:110341176-110341176|C/-|frameshift_variant	47.95952297671804	0.32689736945648856	3				NaN	NaN	0	NaN	3203	3509	6711
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6715	22.683	NaN	3333.7	30	0	424.19	0.106	+			35164	SAIDSVNATSK	11	58	546.7803968683514	1091.5462408035028	2	546.78076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SAIDSVNATSK_	ENSG00000111641|ENST00000322166|NOP2;ENST00000537708.1_1_12:6669555-6669804:-|nuORF;ENST00000544630.1_1_12:6669555-6669953:-|nuORF;nc|ENSG00000111641|P46087-2|NOP2;nc|ENSG00000111641|P46087-3|NOP2;nc|ENSG00000111641|P46087-4|NOP2	106.15719557519877	0.04795798448229554	3				NaN	NaN	0	NaN	3204	3509	6711
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6716	22.685	NaN	1856.1	30	0	272.88	0.106	+			5111	ATSQAQAGWL	10	59	516.76000765002	1031.50546236684	2	516.7604370117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATSQAQAGWL_	ENSG00000134824|ENST00000278840|FADS2;nc|ENSG00000134824|O95864-2|FADS2;nc|ENSG00000134824|O95864-3|FADS2;nc|ENSG00000134824|O95864-4|FADS2	37.81151784470057	0.569310847604193	3				NaN	NaN	0	NaN	3205	3509	6711
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6717	22.686	NaN	2385.5	30	0	768.48	0.036				-1	 	0	39	346.5539611022177	1036.6400539068532	3	346.5534973144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3206	3509	6711
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6718	22.687	NaN	1002	30	0	98.856	0.144	+			36676	SGMQNMSIHTK	11	39	411.8618469238281	NaN	0	411.8618469238281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SGMQNMSIHTK_	CON__H-INV:HIT000292931;CON__P05787;CON__REFSEQ:XP_092267;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	24.27592903087556	0.456735970842152	3				NaN	NaN	0	NaN	3207	3509	6711
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6723	22.703	NaN	4796.9	30	0	751	0.214	+			1570	AGGTFALK	8	55	382.7191545345041	763.4237561358083	2	382.71875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AGGTFALK_	ENST00000318037.3_1_3:196230167-196230401:-|nuORF	65.80317337860623	0.44433089765398776	3				NaN	NaN	0	NaN	3209	3512	6722
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6724	22.707	NaN	4478	30	0	786.71	0.106	+			23087	KVVDSLYNK	9	70	533.3013847439873	1064.5882165547746	2	533.3008422851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVVDSLYNK_	ENSG00000108671|ENST00000261712|PSMD11;ENST00000585265.1_1_17:30807457-30807646:+|nuORF;nc|ENSG00000108671|O00231-2|PSMD11	104.01359247289065	0.03510646158778409	3				NaN	NaN	0	NaN	3210	3512	6722
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6725	22.709	NaN	2998.2	30	0	290.62	0.106	+			44115	TPYEGQRSY	9	70	550.7542983685859	1099.4940438039716	2	550.7546997070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TPYEGQRSY_	ENSG00000005007|ENST00000262803|UPF1;nc|ENSG00000005007|Q92900|UPF1	88.17693792209575	0.07000514020414955	3				NaN	NaN	0	NaN	3211	3512	6722
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6726	22.711	NaN	2426.1	30	0	712.46	0.106	+			45844	VALEPGRAG	9	47	435.2457197750892	868.4768866169784	2	435.2450866699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VALEPGRAG_	ENST00000283629.7_1_3:33481753-33481864:-|nuORF	37.15910966729921	0.4535818937225704	3				NaN	NaN	0	NaN	3212	3512	6722
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6727	22.712	NaN	1910.5	30	0	258.43	0.106	+			36076	SEKDHMVTM	9	58	539.2387868358466	1076.463020738493	2	539.2385864257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SEKDHMVTM_	ENSG00000130826|ENST00000369550|DKC1;nc|ENSG00000130826|O60832-2|DKC1	58.22992032128504	0.22837015374068087	3				NaN	NaN	0	NaN	3213	3512	6722
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6728	22.714	NaN	1308.5	30	0	310.13	0.106	+			46547	VFHAYGGS	8	42	419.198416291736	836.382279650272	2	419.1982727050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VFHAYGGS_	ENSG00000101782|ENST00000339486|RIOK3;ENST00000581302.5_1_18:21033283-21057068:+|nuORF;nc|ENSG00000101782|O14730-2|RIOK3;RIOK3|p.L482*|1|0.4|ENSG00000101782|chr18:23479412-23479412|T/-|frameshift_variant	28.2542754592877	0.7411748056684583	3				NaN	NaN	0	NaN	3214	3512	6722
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6729	22.716	NaN	1309.8	30	0	186.01	0.035			+	34437	RTVIKGNPQ	9	52	506.7987108315955	NaN	0	506.7989807128906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RTVIKGNPQ_	REV__ENSG00000109654|ENST00000338700|TRIM2;REV__nc|ENSG00000109654|Q9C040|TRIM2	26.69291269510374	0.34280015626154364	3				NaN	NaN	0	NaN	3215	3512	6722
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6737	22.734	NaN	6161.8	30	0	2795.3	0.214	+			42596	TATATNHVL	9	58	464.2484949572661	926.4824369813322	2	464.248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TATATNHVL_	ENSG00000004700|ENST00000444129|RECQL	61.691277971877994	0.19951612995419254	3				NaN	NaN	0	NaN	3220	3515	6736
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6738	22.738	NaN	1607.2	30	0	239.06	0.106				-1	DECPHSQAL	9	57	528.7248927683885	1055.4352326035769	2	528.7252197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_DEC(Carbamidomethyl (C))PHSQAL_	ENSG00000106541|ENST00000419304|AGR2	45.97224482568171	0.3502073465782774	3				NaN	NaN	0	NaN	3221	3515	6736
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6739	22.74	NaN	2612	30	0	374.56	0.106	+			5398	ATYGDTINR	9	56	505.7489132645072	1009.4832735958145	2	505.7484130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATYGDTINR_	ENSG00000071189|ENST00000428135|SNX13;nc|ENSG00000071189|Q9Y5W8|SNX13;SNX13|p.E913Qfs*13|1|0.04|ENSG00000071189|chr7:17794182-17794183|-/TTTG|frameshift_variant;SNX13|p.F895Lfs*9|1|0.23|ENSG00000071189|chr7:17794234-17794234|A/-|frameshift_variant;SNX13|p.F911Wfs*5|1|0.02|ENSG00000071189|chr7:17794184-17794187|AAGA/-|frameshift_variant	72.87924865735499	0.12833875048249987	3				NaN	NaN	0	NaN	3222	3515	6736
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6740	22.741	NaN	3662.3	30	0	732.33	0.106			+	30397	PVRPFGPPGPP	11	43	373.2101605812227	1116.608652343868	3	373.2100830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PVRPFGPPGPP_	REV__BSN|p.P3390Hfs*97|1|0.22|ENSG00000164061|chr3:49662009-49662009|C/-|frameshift_variant;REV__BSN|p.P3790Hfs*5|1|0.5|ENSG00000164061|chr3:49663523-49663523|C/-|frameshift_variant;REV__ENSG00000164061|ENST00000296452|BSN	21.9598887501803	0.7594498734240387	3				NaN	NaN	0	NaN	3223	3515	6736
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6741	22.743	NaN	2351.8	30	0	1306.2	0.033			+	35365	SAPREQPL	8	41	449.2439709506049	896.4733889680098	2	449.2430114746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SAPREQPL_	REV__ENSG00000177992|ENST00000325643|SPATA31E1;REV__SPATA31E1|p.S1369Afs*4|1|0.12|ENSG00000177992|chr9:87888591-87888591|T/-|frameshift_variant;REV__SPATA31E1|p.S1369Kfs*11|1|0.12|ENSG00000177992|chr9:87888593-87888594|GC/-|frameshift_variant	45.97224482568171	0.6192535143389125	3				NaN	NaN	0	NaN	3224	3515	6736
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6746	22.757	NaN	5192.7	30	0	2780.4	0.214			+	-1	DNLRRCAR	8	62	530.7756230095663	1059.5366930859325	2	530.775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_DNLRRC(Carbamidomethyl (C))AR_	REV__ENSG00000178741|ENST00000322347|COX5A	33.51558372728122	0.7005509609380386	3				NaN	NaN	0	NaN	3226	3518	6745
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6747	22.761	NaN	5292.3	30	0	935.64	0.106	+			4879	ATQCGSLIGK	10	61	517.7688902168353	1033.5232275004705	2	517.768798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_ATQC(Carbamidomethyl (C))GSLIGK_	ENSG00000169564|ENST00000303577|PCBP1	99.01295224348159	0.08062808246117298	3				NaN	NaN	0	NaN	3227	3518	6745
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6748	22.763	NaN	1632.1	30	0	237.61	0.106				-1	PFFILNCMV	9	51	578.7803610505769	1155.5461691679536	2	578.7798461914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_PFFILNC(Carbamidomethyl (C))M(Oxidation (M))V_	DRD5|p.W309R|1|0.21|ENSG00000169676|chr4:9782954-9782954|T/C|missense_variant;ENSG00000169676|ENST00000304374|DRD5	42.47446043378293	0.39123495718708534	3				NaN	NaN	0	NaN	3228	3518	6745
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6749	22.765	NaN	2941.3	30	0	1294.1	0.106	+			32237	QTFNLNPNL	9	38	354.18581882004713	NaN	0	354.18572998046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QTFNLNPNL_	ENSG00000172888|ENST00000339296|ZNF621;nc|ENSG00000172888|Q6ZSS3-2|ZNF621	25.57405402267927	0.3484490411150625	3				NaN	NaN	0	NaN	3229	3518	6745
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6750	22.767	NaN	1642.7	30	0	196.02	0.034			+	48624	VTSGPTVTTV	10	57	481.2637977318939	960.5130425305878	2	481.2628479003906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTSGPTVTTV_	REV__ENSG00000205277|ENST00000536621|MUC12	62.107414245175825	0.3466735403679669	3				NaN	NaN	0	NaN	3230	3518	6745
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6755	22.78	NaN	847.81	30	0	99.458	0.214				-1	 	0	29	338.70333000519304	675.3921070771861	2	338.7027282714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3232	3521	6754
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6756	22.784	NaN	1633.7	30	0	595.42	0.106				-1	 	0	40	384.77251356766465	767.5304742021293	2	384.77252197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3233	3521	6754
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6757	22.786	NaN	1934.4	30	0	274.1	0.106	+			33340	RGWVLRPA	8	46	477.7850244543324	953.5554959754649	2	477.78375244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RGWVLRPA_	ENST00000264560.11_1_19:746959-747340:+|nuORF	42.47446043378293	0.6409579893742323	3				NaN	NaN	0	NaN	3234	3521	6754
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6758	22.788	NaN	2225.2	30	0	253.8	0.034	+			49406	VVTNVEKE	8	59	459.2497150107046	NaN	0	459.2492370605469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVTNVEKE_	ENSG00000165650|ENST00000334464|PDZD8;PDZD8|p.E1125Dfs*4|1|0.02|ENSG00000165650|chr10:117283358-117283359|-/A|frameshift_variant;PDZD8|p.K969Tfs*12|1|0.27|ENSG00000165650|chr10:117283826-117283827|TT/-|frameshift_variant	40.77816245573522	1.7418937515398478	3				NaN	NaN	0	NaN	3235	3521	6754
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6766	22.806	NaN	1559	30	0	1023.8	0.214				-1	 	0	26	323.2017137472155	644.388874561231	2	323.2012939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3240	3524	6765
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6767	22.81	NaN	1743.6	30	0	526.83	0.106			+	4122	ATEGKLKS	8	45	417.24050006076203	832.4664471883241	2	417.2398376464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATEGKLKS_	REV__ENSG00000184428|ENST00000329245|TOP1MT;REV__nc|ENSG00000184428|Q969P6-2|TOP1MT	32.81241826257853	0.7059802730411993	3				NaN	NaN	0	NaN	3241	3524	6765
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6768	22.811	NaN	1918.6	30	0	221.49	0.106				-1	KVWSCIITN	9	48	560.7930480366158	1119.5715431400315	2	560.7929077148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_KVWSC(Carbamidomethyl (C))IITN_	ENST00000263856.8_1_2:86732031-86732436:-|nuORF	35.61828744233558	0.47037581924408073	3				NaN	NaN	0	NaN	3242	3524	6765
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6769	22.813	NaN	1543.6	30	0	377.87	0.033			+	43437	TGLGAAPVVA	10	49	428.2503749055142	854.4861968778284	2	428.250732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TGLGAAPVVA_	REV__ENST00000403796.6_1_11:124932967-124946675:+|nuORF	37.15910966729921	0.575322462179216	3				NaN	NaN	0	NaN	3243	3524	6765
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6777	22.831	NaN	25940	30	0	2458.1	0.214				-1	 	0	79	504.2800613202844	1006.5455697073688	2	504.2802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3248	3527	6776
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6778	22.835	NaN	2086	30	0	652.62	0.106	+			4361	ATGSVFTGK	9	52	434.2323631552299	866.4501733772598	2	434.2322082519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATGSVFTGK_	ENSG00000126790|ENST00000247194|L3HYPDH	65.46538089061403	0.16805504838372562	3				NaN	NaN	0	NaN	3249	3527	6776
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6779	22.837	NaN	6018.1	30	0	2208.5	0.106			+	26825	LVSVQTLRPG	10	38	357.21724974229517	1068.6299198270856	3	357.21710205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LVSVQTLRPG_	REV__ENSG00000110799|ENST00000261405|VWF	16.473147378115264	0.7327422906225664	3				NaN	NaN	0	NaN	3250	3527	6776
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6780	22.839	NaN	1533.9	30	0	345.44	0.106	+			2752	ARGATTSPGVY	11	57	540.278578597346	1078.542604261492	2	540.2786254882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ARGATTSPGVY_	ENSG00000275395|ENST00000616721|FCGBP;nc|ENSG00000275395|Q9Y6R7|FCGBP	29.170058357718403	0.683821074385409	3				NaN	NaN	0	NaN	3251	3527	6776
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6781	22.84	NaN	825.07	30	0	43.884	0.106			+	23489	LAFPPESL	8	47	437.23797607421875	NaN	0	437.23797607421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LAFPPESL_	REV__ENST00000421980.5_1_7:99716680-99716935:-|nuORF	39.021493756699265	1.7418937515398478	3				NaN	NaN	0	NaN	3252	3527	6776
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6782	22.842	NaN	1253.4	30	0	143.46	0.037	+			5375	ATYERVVYK	9	61	564.8064610563123	NaN	0	564.80712890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATYERVVYK_	ENSG00000163684|ENST00000295959|RPP14;ENST00000461797.5_2_3:58296047-58302269:+|nuORF	47.95952297671804	0.22075498469600283	3				NaN	NaN	0	NaN	3253	3527	6776
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6790	22.86	NaN	3390.6	30	0	585.94	0.214	+			46647	VGDPGQRTL	9	59	471.75419837333027	941.4938438134606	2	471.75311279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VGDPGQRTL_	ARID1A|p.F2141Sfs*59|5|0.26|ENSG00000117713|chr1:26780313-26780313|C/-|frameshift_variant;ARID1A|p.P2114Rfs*21|1|0.46|ENSG00000117713|chr1:26780236-26780236|C/-|frameshift_variant;ARID1A|p.V2244Gfs*34|1|0.31|ENSG00000117713|chr1:26780626-26780627|-/G|frameshift_variant;ENSG00000117713|ENST00000324856|ARID1A;nc|ENSG00000117713|O14497-2|ARID1A;nc|ENSG00000117713|O14497-3|ARID1A	51.52775601994872	0.28504342437107444	3				NaN	NaN	0	NaN	3258	3530	6789
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6791	22.864	NaN	3682.8	30	0	565.63	0.106	+			12689	GEKGPVKVL	9	55	463.78694341204056	925.5593338908811	2	463.7868957519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEKGPVKVL_	ENSG00000141232|ENST00000499247|TOB1;TOB1|p.F274Yfs*52|1|0.06|ENSG00000141232|chr17:50863197-50863198|-/CATGCAGT|frameshift_variant	44.377184641726394	0.36891676396732553	3				NaN	NaN	0	NaN	3259	3530	6789
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6792	22.866	NaN	4165.4	30	0	1050.8	0.106	+			30335	PTSPIRVK	8	53	449.2797744476342	896.5449959620685	2	449.27935791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PTSPIRVK_	ENSG00000196924|ENST00000369850|FLNA;FLNA|p.A1026Lfs*20|1|0.42|ENSG00000196924|chrX:154361439-154361439|C/-|frameshift_variant;FLNA|p.G2237Efs*109|1|0.28|ENSG00000196924|chrX:154352240-154352240|C/-|frameshift_variant;FLNA|p.Q1716Sfs*23|2|0.38|ENSG00000196924|chrX:154354896-154354896|G/-|frameshift_variant;FLNA|p.R2520Vfs*16|1|0.7|ENSG00000196924|chrX:154349560-154349560|G/-|frameshift_variant;nc|ENSG00000196924|P21333-2|FLNA	58.78195531508484	0.5138399468736706	3				NaN	NaN	0	NaN	3260	3530	6789
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6793	22.868	NaN	5330	30	0	1991.5	0.106	+			14239	GSSSSTFIK	9	53	457.2352586456728	912.4559643581456	2	457.2344665527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GSSSSTFIK_	ENSG00000134853|ENST00000257290|PDGFRA	31.529811441608018	0.5085848003137583	3				NaN	NaN	0	NaN	3261	3530	6789
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6794	22.87	NaN	3420.8	30	0	721.19	0.106	+			17780	IESVNGKTV	9	62	473.7638610717758	945.5131692103516	2	473.7635498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IESVNGKTV_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	98.58198989935565	0.04066992115528678	3				NaN	NaN	0	NaN	3262	3530	6789
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6795	22.871	NaN	14487	30	0	5772.5	0.038			+	42044	SWLRHAGATIG	11	52	390.21224864655284	1167.6149165398585	3	390.5458679199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SWLRHAGATIG_	REV__ENSG00000099194|ENST00000370355|SCD	29.550750289552195	0.6798279264880025	3				NaN	NaN	0	NaN	3263	3530	6789
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6796	22.872	NaN	6537.2	30	0	824.43	0.141	+			24495	LGHQYLVEK	9	81	362.8698876415466	1085.5878335248399	3	362.8694152832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LGHQYLVEK_	tr|U7T8F8|U7T8F8_FUSNU[Citrate[pro-3S]-lyase]ligaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00040PE=4SV=1	68.78682469695295	0.14603441672067394	3				NaN	NaN	0	NaN	3264	3530	6789
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6802	22.89	NaN	8083.9	30	0	2181.1	0.214	+			26692	LVHQVFSEK	9	65	543.801243000951	1085.587933068702	2	543.8013305664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LVHQVFSEK_	ENSG00000170324|ENST00000374201|FRMPD2;FRMPD2|p.K602Sfs*61|1|0.27|ENSG00000170324|chr10:48201377-48201377|T/-|frameshift_variant;FRMPD2|p.N579Tfs*84|1|0.32|ENSG00000170324|chr10:48206809-48206809|T/-|frameshift_variant;nc|ENSG00000170324|Q68DX3-2|FRMPD2	98.62937762414208	0.04060045538121712	3				NaN	NaN	0	NaN	3267	3533	6801
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6803	22.893	NaN	7930.4	30	0	926.28	0.106	+			36306	SESAQSKML	9	75	490.7395966598934	979.4646403865868	2	490.7392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SESAQSKML_	ENSG00000179344|ENST00000434651|HLA-DQB1;ENSG00000196126|ENST00000360004|HLA-DRB1;ENSG00000198502|ENST00000374975|HLA-DRB5;ENSG00000232629|ENST00000437316|HLA-DQB2;ENST00000487676.1_1_6:32628015-32629319:-|nuORF;nc|ENSG00000179344|P01920|HLA-DQB1;nc|ENSG00000232629|P05538|HLA-DQB2	129.42129120953632	0.01549634589885217	3				NaN	NaN	0	NaN	3268	3533	6801
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6804	22.895	NaN	4432.7	30	0	2453.5	0.106			+	29698	PHAAGLVAD	9	40	425.72478432635864	849.4350157195173	2	425.72442626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PHAAGLVAD_	REV__ENSG00000126249|ENST00000246535|PDCD2L	25.450171626174864	0.5654022654467333	3				NaN	NaN	0	NaN	3269	3533	6801
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6805	22.897	NaN	1961.1	30	0	283.43	0.106	+			8842	EELVELLVE	9	60	536.7913142729602	1071.5680756127203	2	536.791748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EELVELLVE_	ENSG00000167723|ENST00000576742|TRPV3;ENST00000573539.5_1_17:3442880-3458098:-|nuORF;nc|ENSG00000167723|Q8NET8-2|TRPV3;nc|ENSG00000167723|Q8NET8-3|TRPV3	65.80317337860623	0.1652391959156183	3				NaN	NaN	0	NaN	3270	3533	6801
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6806	22.899	NaN	1375.8	30	0	377.6	0.106			+	11692	FRKIAGSKI	9	30	340.5501229760466	NaN	0	340.55010986328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FRKIAGSKI_	REV__tr|U7STW0|U7STW0_FUSNUHydroxylaminereductaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=hcpPE=3SV=1	23.52269567125451	0.3573684076213556	3				NaN	NaN	0	NaN	3271	3533	6801
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6807	22.901	NaN	1320.1	30	0	325.74	0.106			+	7587	DINMGVAV	8	45	409.70799011229985	817.4014272913997	2	409.7074890136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DINMGVAV_	REV__ENSG00000145864|ENST00000393959|GABRB2;REV__ENST00000517547.5_1_5:160838012-160973588:-|nuORF;REV__ENST00000522758.1_1_5:160886595-160973700:-|nuORF;REV__GABRB2|p.S225Ffs*13|1|0.44|ENSG00000145864|chr5:161336637-161336638|-/A|frameshift_variant;REV__nc|ENSG00000145864|P47870-1|GABRB2;REV__nc|ENSG00000145864|P47870-4|GABRB2	44.53106598305862	0.628196326904373	3				NaN	NaN	0	NaN	3272	3533	6801
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6808	22.903	NaN	1302.6	30	0	174	0.034	+			1106	AELKIKRL	8	51	485.8237071721991	NaN	0	485.8233642578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AELKIKRL_	ENSG00000147604|ENST00000352983|RPL7	31.954861631926434	1.7418937515398478	3				NaN	NaN	0	NaN	3273	3533	6801
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6814	22.919	NaN	6979.4	30	0	1174.3	0.214	+			3588	ASVGYAVTK	9	69	448.2481266728664	894.4817004125329	2	448.2475891113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASVGYAVTK_	ENSG00000180198|ENST00000683442|RCC1;nc|ENSG00000180198|P18754-2|RCC1	99.01295224348159	0.040209060045561164	3				NaN	NaN	0	NaN	3276	3536	6813
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6815	22.922	NaN	7873.1	30	0	2125.7	0.106	+			3313	ASLTDTVNK	9	72	474.75385901243635	947.4931650916727	2	474.75311279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASLTDTVNK_	ENSG00000163946|ENST00000683822|TASOR;nc|ENSG00000163946|Q9UK61-2|TASOR;nc|ENSG00000163946|Q9UK61-3|TASOR;nc|ENSG00000163946|Q9UK61-4|TASOR	123.20810148215591	0.019257656778428764	3				NaN	NaN	0	NaN	3277	3536	6813
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6816	22.924	NaN	6468.3	30	0	887.02	0.106	+			32823	RAYSHSVSL	9	58	510.2673543268334	1018.5201557204668	2	510.2672119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RAYSHSVSL_	ENSG00000275395|ENST00000616721|FCGBP;FCGBP-ACSS2|1|fusion;nc|ENSG00000275395|Q9Y6R7|FCGBP	67.49366992349736	0.1516260258713357	3				NaN	NaN	0	NaN	3278	3536	6813
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6817	22.926	NaN	2681	30	0	855.68	0.106	+			30368	PVHRPNPL	8	54	465.2683896154753	928.5222262977506	2	465.2684020996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PVHRPNPL_	ENSG00000080603|ENST00000262518|SRCAP;nc|ENSG00000080603|Q6ZRS2-2|SRCAP;nc|ENSG00000080603|Q6ZRS2-3|SRCAP;SRCAP|p.L2975*|1|0.31|ENSG00000080603|chr16:30738960-30738960|C/-|frameshift_variant	42.47446043378293	0.6409579893742323	3				NaN	NaN	0	NaN	3279	3536	6813
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6818	22.928	NaN	1881.8	30	0	511.64	0.106			+	32560	QVVLHQSKI	9	45	351.2137626924683	1050.619458677605	3	351.5478820800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QVVLHQSKI_	REV__ENST00000574081.5_2_17:5113523-5113853:-|nuORF	23.52269567125451	0.5834155526130771	3				NaN	NaN	0	NaN	3280	3536	6813
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6819	22.93	NaN	676.61	30	0	86.293	0.106	+			19233	KAANPGCSL	9	34	430.71868756972117	859.4228222062424	2	430.71771240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KAANPGCSL_	ENSG00000115839|ENST00000264158|RAB3GAP1;nc|ENSG00000115839|Q15042-3|RAB3GAP1;nc|ENSG00000115839|Q15042-4|RAB3GAP1	25.57405402267927	0.5642445186134241	3				NaN	NaN	0	NaN	3281	3536	6813
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6820	22.931	NaN	2198.4	30	0	545.2	0.038			+	24673	LGVTEKYESM	10	46	386.189391677352	1155.546345632256	3	386.5234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LGVTEKYESM_	REV__ENSG00000221843|ENST00000447166|C2orf16	29.14955571784316	0.6417842315402807	3				NaN	NaN	0	NaN	3282	3536	6813
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6830	22.953	NaN	12286	30	0	1587.2	0.214	+			28770	NPEHASVAM	9	69	478.2189758829781	954.4233988327562	2	478.2183837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NPEHASVAM_	ENSG00000102317|ENST00000376759|RBM3;ENST00000466764.5_1_X:48433568-48434262:+|nuORF;ENST00000488216.5_1_X:48433568-48434199:+|nuORF;ENST00000491240.5_1_X:48433911-48434199:+|nuORF	87.75429964447693	0.0711966946989736	3				NaN	NaN	0	NaN	3289	3539	6829
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6831	22.957	NaN	4532.6	30	0	1076.4	0.106	+			36013	SEIERQAQV	9	62	530.2755139829366	NaN	0	530.2754516601562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEIERQAQV_	ENSG00000149182|ENST00000524782|ARFGAP2;ENST00000395449.7_1_11:47187835-47198404:-|nuORF;nc|ENSG00000149182|Q8N6H7-2|ARFGAP2	80.45461616416974	0.0698259577396595	3				NaN	NaN	0	NaN	3290	3539	6829
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6832	22.959	NaN	2833.1	30	0	317	0.106	+			49731	VYNNNSSRF	9	65	550.7598221503374	1099.5050913674747	2	550.760498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYNNNSSRF_	ENSG00000145555|ENST00000513610|MYO10;MYO10|p.G1223Rfs*28|1|0.25|ENSG00000145555|chr5:16694504-16694505|-/T|frameshift_variant;MYO10|p.I417Tfs*39|1|0.05|ENSG00000145555|chr5:16764326-16764327|-/ACAAATCTCTG|frameshift_variant;MYO10|p.N507Qfs*30|1|0.11|ENSG00000145555|chr5:16762613-16762614|-/TG|frameshift_variant;MYO10|p.S468Ffs*8|1|0.05|ENSG00000145555|chr5:16763679-16763680|-/A|frameshift_variant	90.60085204095205	0.06317133949006545	3				NaN	NaN	0	NaN	3291	3539	6829
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6833	22.961	NaN	2385.4	30	0	255.49	0.106	+			346	AAQDSTDLVAK	11	59	559.7885924966329	1117.5626320600657	2	559.7886962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AAQDSTDLVAK_	ENSG00000120438|ENST00000321394|TCP1;ENST00000546204.1_1_6:160200657-160201127:-|nuORF	105.16503226865211	0.050009141116738	3				NaN	NaN	0	NaN	3292	3539	6829
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6834	22.962	NaN	1865.2	30	0	666.53	0.106			+	9374	EKATRTLPPL	10	51	563.3352653529417	1124.6559777726834	2	563.3356323242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EKATRTLPPL_	REV__ENST00000399000.7_1_21:38639829-38640075:-|nuORF	45.908116695636124	0.4947047446361497	3				NaN	NaN	0	NaN	3293	3539	6829
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6835	22.964	NaN	1809.6	30	0	247.58	0.035	+			46743	VGRLILYSS	9	28	336.5345490397291	1006.5818177193873	3	336.5343322753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VGRLILYSS_	ENSG00000144320|ENST00000272748|LNPK;nc|ENSG00000144320|Q9C0E8-2|LNPK;nc|ENSG00000144320|Q9C0E8-4|LNPK	17.364965105453717	0.6112419832031293	3				NaN	NaN	0	NaN	3294	3539	6829
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6836	22.965	NaN	1775	30	0	259.59	0.14			+	11931	FVGRERVQ	8	56	495.7774814462143	989.5404099592287	2	495.7765808105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FVGRERVQ_	REV__ENST00000290858.10_1_16:67063120-67063363:+|nuORF	35.61828744233558	0.6843154725607303	3				NaN	NaN	0	NaN	3295	3539	6829
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6842	22.983	NaN	4483	30	0	289.79	0.214	+			19394	KAMVRPCVP	9	72	500.7752121908834	999.5358714485668	2	500.7751159667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAMVRPCVP_	ENST00000469300.6_1_2:128396858-128397856:-|nuORF	65.80317337860623	0.1652391959156183	3				NaN	NaN	0	NaN	3298	3542	6841
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6843	22.986	NaN	1620.8	30	0	656.58	0.106			+	4703	ATLTSIGK	8	43	395.737586110839	789.460619288478	2	395.7370300292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATLTSIGK_	REV__ENSG00000118246|ENST00000402774|FASTKD2;REV__ENST00000487777.5_1_2:207631381-207653673:+|nuORF;REV__nc|ENSG00000118246|Q9NYY8-2|FASTKD2	42.396135135203025	0.6414440140393314	3				NaN	NaN	0	NaN	3299	3542	6841
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6844	22.988	NaN	2423.7	30	0	218.87	0.106	+			25745	LSAAAGRRQ	9	55	465.2683896154753	928.5222262977506	2	465.7662048339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSAAAGRRQ_	ENST00000248076.3_1_19:17000717-17000960:+|nuORF	53.351449002276354	0.2690372970092375	3				NaN	NaN	0	NaN	3300	3542	6841
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6845	22.99	NaN	2152.3	30	0	767.04	0.106			+	46725	VGPGRVSET	9	53	451.2411418839365	900.467730834673	2	451.2403564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VGPGRVSET_	REV__ENST00000529299.2_1_1:110170417-110171118:+|nuORF	30.503639358989545	0.5181749237905803	3				NaN	NaN	0	NaN	3301	3542	6841
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6846	22.992	NaN	3309.2	30	0	502.92	0.036			+	11154	FGKKSSAESF	10	66	544.2747303406275	NaN	0	544.27587890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FGKKSSAESF_	REV__ENSG00000143819|ENST00000272167|EPHX1;REV__EPHX1|p.V285Rfs*24|1|0.42|ENSG00000143819|chr1:225839954-225839955|-/C|frameshift_variant	51.19269402634007	0.2980620950593832	3				NaN	NaN	0	NaN	3302	3542	6841
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6855	23.012	NaN	8700.1	30	0	1318.4	0.214	+			17649	IEKFDKSKL	9	71	554.3242414677261	1106.633930002252	2	554.3245239257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IEKFDKSKL_	ENSG00000154620|ENST00000284856|TMSB4Y;ENSG00000205542|ENST00000451311|TMSB4X;ENST00000323496.5_1_9:131104444-131104642:+|nuORF;TMSB4X|p.A8V|1|0.09|ENSG00000205542|chrX:12976284-12976284|C/T|missense_variant	136.48854661914896	0.012127429220575699	3				NaN	NaN	0	NaN	3308	3545	6854
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6856	23.015	NaN	26411	30	0	7148.4	0.106	+			20809	KIELSYNKI	9	80	369.88532666158255	1106.6341505849477	3	369.88494873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KIELSYNKI_	ENSG00000240720|ENST00000458448|LRRD1	90.60085204095205	0.06317133949006545	3				NaN	NaN	0	NaN	3309	3545	6854
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6857	23.017	NaN	8067.5	30	0	1059.6	0.106	+			12920	GESHVSGTTTL	11	71	544.7645841785617	1087.5146154239233	2	544.7659301757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GESHVSGTTTL_	ENSG00000124422|ENST00000261497|USP22;ENST00000478443.1_1_17:20910195-20914666:-|nuORF;nc|ENSG00000124422|Q9UPT9-2|USP22	75.04331003522576	0.19369523587789836	3				NaN	NaN	0	NaN	3310	3545	6854
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6858	23.019	NaN	1409.5	30	0	193.12	0.106	+			19470	KASSEMALYQK	11	61	628.3213875742671	1254.628222215334	2	628.321044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KASSEMALYQK_	ENSG00000155463|ENST00000612549|OXA1L;ENST00000473744.5_1_14:23235910-23239613:+|nuORF;ENST00000481218.1_1_14:23236498-23239613:+|nuORF;ENST00000495424.5_1_14:23235916-23239613:+|nuORF;nc|ENSG00000155463|Q15070-2|OXA1L;nc|ENSG00000155463|Q15070-3|OXA1L;OXA1L|p.N431Mfs*4|1|0.29|ENSG00000155463|chr14:22771273-22771273|A/-|frameshift_variant	36.31764250033197	0.6083289427130232	3				NaN	NaN	0	NaN	3311	3545	6854
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6859	23.021	NaN	1621.4	30	0	131.54	0.106	+			26714	LVKINTGKA	9	56	472.3007896842371	942.5870264352742	2	472.29998779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LVKINTGKA_	ENST00000417517.1_1_1:43357732-43357957:-|nuORF	35.61828744233558	0.47037581924408073	3				NaN	NaN	0	NaN	3312	3545	6854
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6860	23.023	NaN	5957.8	30	0	686.85	0.106	+			12522	GEFEKKYVA	9	64	535.7801648878071	1069.5457768424142	2	536.2819213867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GEFEKKYVA_	ENSG00000132341|ENST00000543796|RAN	93.1432384553994	0.056003526918089595	3				NaN	NaN	0	NaN	3313	3545	6854
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6861	23.024	NaN	1113.1	30	0	181.67	0.04			+	33922	RRVLSHEKRE	10	46	437.2539511542446	NaN	0	437.2540283203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RRVLSHEKRE_	REV__ENST00000296292.7_1_3:53123294-53123450:-|nuORF	30.568863376406313	0.39980281766270914	3				NaN	NaN	0	NaN	3314	3545	6854
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6871	23.048	NaN	18310	30	0	3264.9	0.214				-1	 	0	84	374.5694218875369	1120.6864362628107	3	374.5689697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3321	3548	6870
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6872	23.051	NaN	4534.3	30	0	593.7	0.106	+			35030	SADDRCKVL	9	59	503.75291279469616	1005.4912726561923	2	503.75238037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SADDRCKVL_	ENSG00000111605|ENST00000435070|CPSF6;nc|ENSG00000111605|Q16630-2|CPSF6;nc|ENSG00000111605|Q16630-3|CPSF6	39.252832667884924	0.4290233611298554	3				NaN	NaN	0	NaN	3322	3548	6870
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6873	23.053	NaN	2121.8	30	0	536.05	0.106	+			22430	KTLDAEVVEK	10	60	566.3168419656479	1130.6191309980957	2	566.316650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KTLDAEVVEK_	ENSG00000185049|ENST00000382882|NELFA;ENST00000463820.5_1_4:1985048-1993691:-|nuORF;ENST00000467661.5_1_4:1985048-1988196:-|nuORF;nc|ENSG00000185049|Q9H3P2-7|NELFA;NELFA|p.P411Rfs*67|1|0.23|ENSG00000185049|chr4:1983918-1983918|G/-|frameshift_variant	95.4829727501206	0.09968275784893506	3				NaN	NaN	0	NaN	3323	3548	6870
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6874	23.055	NaN	5117.3	30	0	2414.6	0.106			+	26808	LVSNYGKTL	9	59	497.7823015452684	993.5500501573368	2	497.7820739746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LVSNYGKTL_	REV__ENST00000512560.5_1_5:79279160-79279214:-|nuORF	32.81241826257853	0.4965981579233955	3				NaN	NaN	0	NaN	3324	3548	6870
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6875	23.057	NaN	2450.5	30	0	592.33	0.106	+			29037	NSVFAVNQAV	10	56	524.7766137443834	1047.5386745555668	2	524.7783813476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NSVFAVNQAV_	ENSG00000149308|ENST00000278612|NPAT;ENST00000610253.5_1_11:108042863-108061204:-|nuORF;NPAT|p.H1279Qfs*13|1|0.22|ENSG00000149308|chr11:108161248-108161249|TA/-|frameshift_variant;NPAT|p.K1038Efs*20|1|0.37|ENSG00000149308|chr11:108161974-108161975|-/C|frameshift_variant;NPAT|p.S1040Ifs*18|2|0.28|ENSG00000149308|chr11:108161968-108161969|-/T|frameshift_variant	38.753607047826485	0.5606299674732264	3				NaN	NaN	0	NaN	3325	3548	6870
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6876	23.059	NaN	2150.4	30	0	266.5	0.034	+			1279	AESKGVVKF	9	56	482.77719547451113	963.5398380158223	2	482.7766418457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AESKGVVKF_	ENSG00000064651|ENST00000262461|SLC12A2;nc|ENSG00000064651|P55011-3|SLC12A2;SLC12A2|p.E1119Rfs*7|1|0.47|ENSG00000064651|chr5:128184417-128184418|-/A|frameshift_variant;SLC12A2|p.F466Lfs*59|1|0.11|ENSG00000064651|chr5:128135793-128135793|T/-|frameshift_variant;SLC12A2|p.P1171Sfs*18|1|0.38|ENSG00000064651|chr5:128186498-128186499|-/TC|frameshift_variant	95.81516180277367	0.04847050768394289	3				NaN	NaN	0	NaN	3326	3548	6870
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6877	23.059	NaN	2127.7	30	0	214.56	0.14	+			30183	PSKLSSKRP	9	59	500.3013433709062	998.5881338086124	2	500.7877197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PSKLSSKRP_	ENSG00000074590|ENST00000261402|NUAK1;NUAK1|p.P507Rfs*6|1|0.5|ENSG00000074590|chr12:106067268-106067268|G/-|frameshift_variant	26.69291269510374	0.5537881896960711	3				NaN	NaN	0	NaN	3327	3548	6870
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6882	23.075	NaN	2691.7	30	0	1449.9	0.214			+	23641	LAREVTSTD	9	38	331.1725553839751	990.4958367521253	3	331.17242431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LAREVTSTD_	REV__ENST00000265245.9_1_3:194362482-194362794:-|nuORF	25.57405402267927	0.5642445186134241	3				NaN	NaN	0	NaN	3329	3551	6881
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6883	23.079	NaN	2249.8	30	0	323.35	0.106	+			12560	GEGKPTPAL	9	54	435.24011569996816	868.4656784667363	2	435.2398681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEGKPTPAL_	ENSG00000132305|ENST00000410111|IMMT;ENST00000409258.2_1_2:86386442-86398424:-|nuORF;ENST00000474969.5_1_2:86385703-86422514:-|nuORF;nc|ENSG00000132305|Q16891-2|IMMT;nc|ENSG00000132305|Q16891-3|IMMT;nc|ENSG00000132305|Q16891-4|IMMT	56.72105179125745	0.24094814563026265	3				NaN	NaN	0	NaN	3330	3551	6881
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6884	23.081	NaN	5281.3	30	0	1487.5	0.106	+			18842	IVAGTLTNK	9	57	458.77690471310194	915.5392564930039	2	458.776611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IVAGTLTNK_	DAZAP1-NDUFS7|1|fusion;ENSG00000115286|ENST00000233627|NDUFS7;ENST00000436115.6_1_19:1390815-1393403:+|nuORF;ENST00000538523.5_1_19:1387763-1393403:+|nuORF;ENST00000538662.5_1_19:1383907-1391085:+|nuORF;ENST00000543289.5_1_19:1388688-1391085:+|nuORF;ENST00000545446.5_1_19:1388688-1393403:+|nuORF;nc|ENSG00000115286|O75251-2|NDUFS7	124.08010499294276	0.018729767491916592	3				NaN	NaN	0	NaN	3331	3551	6881
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6885	23.083	NaN	1306.3	30	0	243.65	0.106				-1	VLPRMFIL	8	36	335.5377625568676	1003.5914582708028	3	335.5377197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_VLPRM(Oxidation (M))FIL_	ENST00000336798.11_2_1:31345142-31345343:-|nuORF	26.79610172149135	0.7524337208463756	3				NaN	NaN	0	NaN	3332	3551	6881
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6886	23.084	NaN	708.09	30	0	54.63	0.106			+	19575	KCWGGGLS	8	44	404.1948563844398	806.3751598356796	2	404.19427490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KCWGGGLS_	REV__ENST00000565396.5_1_16:2052877-2053195:-|nuORF	20.481830146152948	0.8005983782650069	3				NaN	NaN	0	NaN	3333	3551	6881
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6887	23.086	NaN	969.13	30	0	217.42	0.106	+			4157	ATEVVNPLLE	10	33	362.20169965070323	1083.5832695523097	3	362.2015380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATEVVNPLLE_	ENSG00000160838|ENST00000337428|LRRC71;LRRC71|p.P458H|1|0.49|ENSG00000160838|chr1:156931959-156931959|C/A|missense_variant;nc|ENSG00000160838|Q8N4P6-2|LRRC71	32.75053402867276	0.6123771875927935	3				NaN	NaN	0	NaN	3334	3551	6881
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6888	23.088	NaN	938.74	30	0	207.75	0.034	+			7317	DASPEILAE	9	45	472.73308673901	943.45162054482	2	472.73260498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DASPEILAE_	tr|U7SNB1|U7SNB1_FUSNURNApolymerasesigmafactorSigAOS=FusobacteriumnucleatumCTI-5OX=1316586GN=sigAPE=3SV=1	35.61828744233558	0.47037581924408073	3				NaN	NaN	0	NaN	3335	3551	6881
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6894	23.102	NaN	2086.5	30	0	588.05	0.214	+			16228	HEDPGQATL	9	47	484.2278639476275	966.441174962055	2	484.2272033691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HEDPGQATL_	ENSG00000124177|ENST00000373233|CHD6;ENST00000480022.1_1_20:40033235-40042188:-|nuORF	30.317721548370564	0.5199124245378496	3				NaN	NaN	0	NaN	3338	3554	6893
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6895	23.106	NaN	4659.2	30	0	748.99	0.106			+	-1	NDIENKMK	8	63	504.2437690898784	1006.4729852465568	2	504.2427978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_NDIENKM(Oxidation (M))K_	REV__ENSG00000185958|ENST00000327337|FAM186A;REV__FAM186A|p.K681Nfs*7|1|0.11|ENSG00000185958|chr12:50354789-50354789|T/-|frameshift_variant;REV__FAM186A|p.K741Rfs*10|1|0.13|ENSG00000185958|chr12:50354610-50354610|T/-|frameshift_variant;REV__FAM186A|p.K754Rfs*2|2|0.18|ENSG00000185958|chr12:50354571-50354571|T/-|frameshift_variant;REV__FAM186A|p.M1001Nfs*25|1|0.32|ENSG00000185958|chr12:50353830-50353831|-/T|frameshift_variant	47.657333605630114	0.6087971902037268	3				NaN	NaN	0	NaN	3339	3554	6893
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6896	23.108	NaN	1919.5	30	0	182.88	0.106	+			36307	SESAQSKML	9	56	490.7395966598934	979.4646403865868	2	491.23583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SESAQSKML_	ENSG00000179344|ENST00000434651|HLA-DQB1;ENSG00000196126|ENST00000360004|HLA-DRB1;ENSG00000198502|ENST00000374975|HLA-DRB5;ENSG00000232629|ENST00000437316|HLA-DQB2;ENST00000487676.1_1_6:32628015-32629319:-|nuORF;nc|ENSG00000179344|P01920|HLA-DQB1;nc|ENSG00000232629|P05538|HLA-DQB2	37.81151784470057	0.4459294069877048	3				NaN	NaN	0	NaN	3340	3554	6893
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6897	23.11	NaN	2643	30	0	825.74	0.106	+			24735	LHRDSKRFQ	9	50	396.21960119950586	1185.6369741987176	3	396.21893310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LHRDSKRFQ_	ENSG00000117595|ENST00000367021|IRF6	36.446750945000026	0.4619375763483977	3				NaN	NaN	0	NaN	3341	3554	6893
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6898	23.112	NaN	1365.5	30	0	124.8	0.106			+	530	ADAGLRSSL	9	49	445.24025238773453	888.4659518422691	2	445.2394714355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ADAGLRSSL_	REV__ENSG00000154133|ENST00000306534|ROBO4;REV__ENST00000532216.5_1_11:124756354-124763822:-|nuORF;REV__ENST00000534407.5_1_11:124757602-124761787:-|nuORF;REV__nc|ENSG00000154133|Q8WZ75-2|ROBO4;REV__nc|ENSG00000154133|Q8WZ75-3|ROBO4	74.25504064058377	0.12238981753128622	3				NaN	NaN	0	NaN	3342	3554	6893
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6899	23.113	NaN	1227.3	30	0	173.71	0.106			+	-1	AEPDFHMN	8	47	488.69456659908	NaN	0	488.6944885253906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_AEPDFHM(Oxidation (M))N_	REV__BRINP3|p.S672N|1|0.41|ENSG00000162670|chr1:190098304-190098304|C/T|missense_variant	40.5726180659479	1.7418937515398478	3				NaN	NaN	0	NaN	3343	3554	6893
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6900	23.115	NaN	2230.4	30	0	305.26	0.037	+			50673	YEEEVKKTL	9	70	569.8033746554947	1137.5921963777894	2	569.8041381835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YEEEVKKTL_	ECHDC1|p.N109Ifs*9|1|0.19|ENSG00000093144|chr6:127327057-127327057|T/-|frameshift_variant;ECHDC1|p.N222Mfs*3|1|0.46|ENSG00000093144|chr6:127290128-127290128|T/-|frameshift_variant;ENSG00000093144|ENST00000454859|ECHDC1;ENST00000368287.1_1_6:127648134-127664493:-|nuORF;nc|ENSG00000093144|Q9NTX5-5|ECHDC1;nc|ENSG00000093144|Q9NTX5-6|ECHDC1;nc|ENSG00000093144|Q9NTX5|ECHDC1	98.58198989935565	0.04066992115528678	3				NaN	NaN	0	NaN	3344	3554	6893
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6907	23.132	NaN	3443.3	30	0	509.95	0.214			+	30753	QDNKQPKL	8	60	485.76934278037123	969.5241326275425	2	485.76861572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QDNKQPKL_	REV__ENSG00000166436|ENST00000646038|TRIM66;REV__nc|ENSG00000166436|O15016-2|TRIM66;REV__nc|ENSG00000166436|O15016|TRIM66;REV__TRIM66|p.P964Qfs*4|1|0.37|ENSG00000166436|chr11:8621158-8621158|G/-|frameshift_variant	49.44154591367651	0.597725784090933	3				NaN	NaN	0	NaN	3348	3557	6906
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6908	23.135	NaN	1596.8	30	0	160.83	0.106	+			30548	QALAINSSEP	10	59	515.2642103256366	1028.513867718073	2	515.2640991210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QALAINSSEP_	ENSG00000052841|ENST00000039989|TTC17;nc|ENSG00000052841|Q96AE7-2|TTC17	37.81151784470057	0.569310847604193	3				NaN	NaN	0	NaN	3349	3557	6906
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6909	23.137	NaN	1035.6	30	0	140.71	0.106	+			11524	FPEEDKKTY	9	50	578.7803610505769	1155.5461691679536	2	578.7803344726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FPEEDKKTY_	ENSG00000151366|ENST00000281031|NDUFC2;nc|ENSG00000151366|O95298-2|NDUFC2	46.45678178249821	0.34452392205506005	3				NaN	NaN	0	NaN	3350	3557	6906
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6910	23.139	NaN	1449.7	30	0	214.78	0.106	+			13253	GINREVLP	8	48	449.2612136479282	896.5078743626564	2	449.2596435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GINREVLP_	DNAH8|p.D4227Afs*7|1|0.04|ENSG00000124721|chr6:39008929-39008930|-/CAGTGTT|frameshift_variant;DNAH8|p.Q3444Rfs*16|1|0.31|ENSG00000124721|chr6:38926073-38926073|C/-|frameshift_variant;ENSG00000124721|ENST00000327475|DNAH8;nc|ENSG00000124721|Q96JB1-2|DNAH8;nc|ENSG00000124721|Q96JB1|DNAH8	35.200714571348534	0.6875396545722289	3				NaN	NaN	0	NaN	3351	3557	6906
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6911	23.141	NaN	1320	30	0	75.548	0.106			+	31655	QNANQTKLA	9	48	494.26463785486027	NaN	0	494.26348876953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QNANQTKLA_	REV__ENSG00000180530|ENST00000318948|NRIP1;REV__NRIP1|p.E729Rfs*5|1|0.34|ENSG00000180530|chr21:14966009-14966009|T/-|frameshift_variant;REV__NRIP1|p.E729Rfs*8|1|0.33|ENSG00000180530|chr21:14966008-14966009|-/T|frameshift_variant;REV__NRIP1|p.N516Tfs*11|1|0.46|ENSG00000180530|chr21:14966646-14966646|T/-|frameshift_variant	44.116797842482775	0.2472372736944149	3				NaN	NaN	0	NaN	3352	3557	6906
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6912	23.143	NaN	1153.2	30	0	140.79	0.036				-1	VSEHAVMLAK	10	57	550.7920401913034	1099.5695274494067	2	550.8372192382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_VSEHAVM(Oxidation (M))LAK_	ENSG00000129493|ENST00000543095|HEATR5A;ENST00000549185.5_3_14:31803609-31872202:-|nuORF;nc|ENSG00000129493|Q86XA9-2|HEATR5A;nc|ENSG00000129493|Q86XA9|HEATR5A	26.69291269510374	0.6618461711292317	3				NaN	NaN	0	NaN	3353	3557	6906
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6920	23.161	NaN	3982.1	30	0	328.85	0.214			+	45762	VAEQKKFSD	9	61	526.2748789074284	1050.5352048816567	2	526.77685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VAEQKKFSD_	REV__ENSG00000099308|ENST00000687212|MAST3;REV__nc|ENSG00000099308|O60307|MAST3	27.882242232435846	0.5426732730940306	3				NaN	NaN	0	NaN	3358	3560	6919
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6921	23.164	NaN	3300.5	30	0	558.37	0.106			+	2505	APTPGPVQLK	10	69	504.29929888605983	1006.5840448389197	2	504.2973327636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_APTPGPVQLK_	REV__ENST00000361740.8_1_22:43015308-43015401:-|nuORF	62.107414245175825	0.3466735403679669	3				NaN	NaN	0	NaN	3359	3560	6919
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6922	23.166	NaN	1486.6	30	0	116.9	0.106	+			18446	ISDLLKKAQ	9	59	508.31081296363396	1014.607072994068	2	508.31072998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ISDLLKKAQ_	ENSG00000205089|ENST00000378731|CCNI2;nc|ENSG00000205089|Q6ZMN8-2|CCNI2;nc|ENSG00000205089|Q6ZMN8-3|CCNI2	55.08391021199286	0.2545954270840753	3				NaN	NaN	0	NaN	3360	3560	6919
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6923	23.168	NaN	3820	30	0	530.32	0.106	+			39906	STLTYRMTK	9	73	550.7920401913034	1099.5695274494067	2	550.7925415039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STLTYRMTK_	ENST00000446662.5_1_16:22466144-22470768:+|nuORF;ENST00000522841.6_1_16:21490806-21495758:-|nuORF	81.52500206392136	0.09095445986635249	3				NaN	NaN	0	NaN	3361	3560	6919
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6924	23.17	NaN	1316.7	30	0	236.25	0.106			+	-1	NFPLNTRDSM	10	52	605.7787475585938	NaN	0	605.7787475585938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_NFPLNTRDSM(Oxidation (M))_	REV__ENST00000430801.5_1_7:77314558-77314603:-|nuORF	31.529811441608018	0.39664753963064203	3				NaN	NaN	0	NaN	3362	3560	6919
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6925	23.172	NaN	1848.1	30	0	824.27	0.033			+	202	AALGAPPTR	9	39	427.2483799458058	852.4822069584117	2	427.2481384277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AALGAPPTR_	REV__ENST00000474879.6_3_22:50944533-50944617:-|nuORF	24.20275056022122	0.577060078256802	3				NaN	NaN	0	NaN	3363	3560	6919
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6933	23.191	NaN	9952.9	30	0	1128.4	0.214	+			49393	VVTEHLINK	9	81	526.8087135252348	1051.6028741172695	2	526.8087158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVTEHLINK_	ENSG00000036257|ENST00000264414|CUL3;nc|ENSG00000036257|Q13618-2|CUL3	134.7655990226056	0.012935733000282069	3				NaN	NaN	0	NaN	3368	3563	6932
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6934	23.195	NaN	14181	30	0	6660.5	0.106			+	-1	STRPLVMPPS	10	53	367.53072038306027	1099.5703317493808	3	367.5303955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_STRPLVM(Oxidation (M))PPS_	REV__ENSG00000145147|ENST00000504154|SLIT2;REV__nc|ENSG00000145147|O94813-2|SLIT2;REV__nc|ENSG00000145147|O94813-3|SLIT2	36.446750945000026	0.5818864909973037	3				NaN	NaN	0	NaN	3369	3563	6932
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6935	23.197	NaN	8166.6	30	0	1429.1	0.106	+			4624	ATLNVSTTR	9	63	481.7672519697689	961.5199510063378	2	481.7666320800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATLNVSTTR_	ENSG00000088448|ENST00000267339|ANKRD10;ENST00000460846.1_1_13:111557570-111567134:-|nuORF;nc|ENSG00000088448|Q9NXR5-2|ANKRD10	133.9934435666947	0.013297982075521412	3				NaN	NaN	0	NaN	3370	3563	6932
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6936	23.199	NaN	3905.2	30	0	1893.1	0.106	+			49127	VVLSPKQGQP	10	37	351.5415787968552	1051.6029069907656	3	351.54132080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVLSPKQGQP_	ENSG00000118407|ENST00000237172|FILIP1;nc|ENSG00000118407|Q7Z7B0-2|FILIP1;nc|ENSG00000118407|Q7Z7B0-3|FILIP1	28.081489160057373	0.6505064946289502	3				NaN	NaN	0	NaN	3371	3563	6932
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6937	23.2	NaN	2167.7	30	0	686.68	0.106	+			28726	NNQGLDFTK	9	39	518.756555788472	1035.498558643744	2	518.7567138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NNQGLDFTK_	tr|U7SR09|U7SR09_FUSNUProteinAbiQOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01744PE=4SV=1	27.882242232435846	0.5426732730940306	3				NaN	NaN	0	NaN	3372	3563	6932
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6938	23.202	NaN	2147.4	30	0	578.26	0.106			+	625	ADVKRYSLM	9	36	361.5272956649155	1081.5600575949466	3	361.5269775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ADVKRYSLM_	REV__ENST00000501104.2_1_8:70749366-70749438:+|nuORF	21.9598887501803	0.5980208138527809	3				NaN	NaN	0	NaN	3373	3563	6932
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6939	23.204	NaN	7540.1	30	0	764.88	0.035	+			8848	EENSHLTSV	9	72	508.2385130657989	1014.4624731983978	2	508.2381591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EENSHLTSV_	ENSG00000157557|ENST00000360938|ETS2	122.1759843771914	0.019882474861609503	3				NaN	NaN	0	NaN	3374	3563	6932
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6951	23.229	NaN	5115.4	30	0	3279.9	0.214	+			318	AAPSAAREL	9	51	443.24334073754386	884.4721285418877	2	443.2425537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAPSAAREL_	ENSG00000107960|ENST00000224950|STN1	72.87924865735499	0.12833875048249987	3				NaN	NaN	0	NaN	3383	3566	6950
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6952	23.233	NaN	4769.3	30	0	2420.9	0.106				-1	 	0	41	398.2220793997384	794.4296058662768	2	398.2213134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3384	3566	6950
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6953	23.235	NaN	2517.3	30	0	565.21	0.106			+	39539	STFSIELF	8	62	472.2404294100886	942.4663058869772	2	472.2391052246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STFSIELF_	REV__ENSG00000179626|ENST00000641569|OR6C4;REV__ENSG00000187857|ENST00000641576|OR6C75;REV__OR6C4|p.F101Lfs*31|1|0.49|ENSG00000179626|chr12:55551523-55551523|T/-|frameshift_variant	57.81127852772723	0.5234495074909924	3				NaN	NaN	0	NaN	3385	3566	6950
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6954	23.237	NaN	860	30	0	87.259	0.106	+			32927	REAEGQLQKL	10	47	586.3251406878946	1170.6357284425892	2	586.3251342773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_REAEGQLQKL_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	36.31764250033197	0.5830761606467809	3				NaN	NaN	0	NaN	3386	3566	6950
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6955	23.238	NaN	2126.4	30	0	342.1	0.106	+			10310	ETQTLRQGV	9	58	516.2778624081382	1030.5411718830762	2	516.2769165039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ETQTLRQGV_	ENSG00000048052|ENST00000686413|HDAC9;ENST00000461159.6_1_7:18330122-18868840:+|nuORF;HDAC9|p.D553Mfs*46|1|0.4|ENSG00000048052|chr7:18666406-18666412|CAGTGGA/-|frameshift_variant;nc|ENSG00000048052|Q9UKV0-10|HDAC9;nc|ENSG00000048052|Q9UKV0-11|HDAC9;nc|ENSG00000048052|Q9UKV0-2|HDAC9;nc|ENSG00000048052|Q9UKV0-3|HDAC9;nc|ENSG00000048052|Q9UKV0-4|HDAC9;nc|ENSG00000048052|Q9UKV0-5|HDAC9;nc|ENSG00000048052|Q9UKV0-6|HDAC9;nc|ENSG00000048052|Q9UKV0-8|HDAC9;nc|ENSG00000048052|Q9UKV0-9|HDAC9;nc|ENSG00000048052|Q9UKV0|HDAC9	45.97224482568171	0.3502073465782774	3				NaN	NaN	0	NaN	3387	3566	6950
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6956	23.24	NaN	1865.8	30	0	520.61	0.106				-1	 	0	38	328.70958819157516	655.4046234499503	2	328.7095031738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3388	3566	6950
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6957	23.242	NaN	2607.6	30	0	521.51	0.035				-1	 	0	59	504.2800613202844	1006.5455697073688	2	504.27630615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3389	3566	6950
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6963	23.257	NaN	2298.9	30	0	317.71	0.214			+	10808	FALPEDAG	8	53	410.1966948555427	818.3788367778855	2	410.19635009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FALPEDAG_	REV__ENST00000225726.9_1_17:61850918-61850993:-|nuORF	37.028477286268924	0.6747514403204248	3				NaN	NaN	0	NaN	3392	3569	6962
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6964	23.26	NaN	6484.9	30	0	3614.6	0.106	+			36976	SIMSSHVMK	9	46	340.50552367952326	1018.4947416387698	3	340.5052185058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SIMSSHVMK_	ENSG00000159140|ENST00000356577|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-4|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-6|SON;nc|ENSG00000159140|P18583-7|SON;nc|ENSG00000159140|P18583-9|SON	29.170058357718403	0.5306379469863586	3				NaN	NaN	0	NaN	3393	3569	6962
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6965	23.262	NaN	5535.9	30	0	2033.4	0.106	+			45458	TYAEKLHRL	9	55	377.54819145781846	1129.6227449736555	3	377.5491638183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TYAEKLHRL_	DST|p.K5076Nfs*24|1|0.31|ENSG00000151914|chr6:56472218-56472218|T/-|frameshift_variant;DST|p.L1539Ffs*11|1|0.39|ENSG00000151914|chr6:56611525-56611526|-/A|frameshift_variant;DST|p.N1220Tfs*9|1|0.23|ENSG00000151914|chr6:56630354-56630354|T/-|frameshift_variant;DST|p.T4428Nfs*23|1|0.12|ENSG00000151914|chr6:56497896-56497897|-/T|frameshift_variant;ENSG00000151914|ENST00000680361|DST;ENST00000521104.1_1_6:56504020-56557947:-|nuORF;ENST00000523967.5_1_6:56504020-56716372:-|nuORF;nc|ENSG00000151914|Q03001-13|DST;nc|ENSG00000151914|Q03001-14|DST;nc|ENSG00000151914|Q03001-3|DST;nc|ENSG00000151914|Q03001-8|DST;nc|ENSG00000151914|Q03001-9|DST;nc|ENSG00000151914|Q03001|DST	42.86426827375447	0.38666266728046506	3				NaN	NaN	0	NaN	3394	3569	6962
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6966	23.264	NaN	1526.4	30	0	221.17	0.106				-1	ECMLAVDIEDR	11	49	655.2922678986395	1308.5699828640788	2	655.2918701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_ECM(Oxidation (M))LAVDIEDR_	ENSG00000128731|ENST00000261609|HERC2;ENST00000570209.1_1_15:31108772-31126588:+|nuORF	38.753607047826485	0.5749975102143227	3				NaN	NaN	0	NaN	3395	3569	6962
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6967	23.266	NaN	1756.5	30	0	102.79	0.106	+			10363	ETWKKNRR	8	61	559.3138104472881	1116.6130679613761	2	559.8145751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ETWKKNRR_	ENSG00000211455|ENST00000389032|STK38L;ENST00000536093.5_3_12:27468169-27475385:+|nuORF;nc|ENSG00000211455|Q9Y2H1-2|STK38L;STK38L|p.F383Lfs*9|1|0.1|ENSG00000211455|chr12:27319392-27319392|T/-|frameshift_variant	51.33545320467046	0.5859736979383976	3				NaN	NaN	0	NaN	3396	3569	6962
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6968	23.268	NaN	3937.4	30	0	671.99	0.106	+			12752	GELEPQTR	8	64	465.2376926813121	928.4608324294243	2	465.23760986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GELEPQTR_	ATP1A2|p.S220L|1|0.61|ENSG00000018625|chr1:160125164-160125164|C/T|missense_variant	39.252832667884924	0.6609488554722044	3				NaN	NaN	0	NaN	3397	3569	6962
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6969	23.269	NaN	1395	30	0	159.16	0.035				-1	SSRGPMKLI	9	52	502.7819550223716	NaN	0	502.7816162109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_SSRGPM(Oxidation (M))KLI_	ENSG00000107518|ENST00000355044|ATRNL1	31.529811441608018	0.3183796599642538	3				NaN	NaN	0	NaN	3398	3569	6962
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6977	23.288	NaN	16339	30	0	2943.5	0.214	+			39136	SSVGSVITK	9	73	439.25338017074574	876.4922074082915	2	439.2528381347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSVGSVITK_	ENSG00000076554|ENST00000518937|TPD52;ENST00000517445.5_1_8:80962678-80964851:-|nuORF;ENST00000521354.5_1_8:80950353-81083761:-|nuORF;ENST00000522364.5_1_8:80963727-80992703:-|nuORF;nc|ENSG00000076554|P55327-2|TPD52;nc|ENSG00000076554|P55327-3|TPD52;nc|ENSG00000076554|P55327-5|TPD52;nc|ENSG00000076554|P55327-6|TPD52;nc|ENSG00000076554|P55327-7|TPD52;nc|ENSG00000076554|P55327|TPD52;TPD52|p.K164Sfs*5|1|0.09|ENSG00000076554|chr8:80051542-80051542|T/-|frameshift_variant	168.25843898104137	0.0030641937004078144	3				NaN	NaN	0	NaN	3403	3572	6976
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6978	23.291	NaN	13681	30	0	2894.3	0.106	+			14608	GTGDVKLLK	9	63	465.7846548334603	929.5547567337206	2	465.7840576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTGDVKLLK_	ENSG00000099901|ENST00000430524|RANBP1;ENST00000435265.5_1_22:20106640-20110140:+|nuORF;ENST00000488484.1_1_22:20105172-20110015:+|nuORF;nc|ENSG00000099901|P43487-2|RANBP1;nc|ENSG00000099901|P43487|RANBP1	67.49366992349736	0.1516260258713357	3				NaN	NaN	0	NaN	3404	3572	6976
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6979	23.293	NaN	3807.5	30	0	540.73	0.106	+			42420	TAKSVTCTY	9	60	487.23672854121526	972.4589041492305	2	487.23590087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TAKSVTCTY_	ENSG00000141510|ENST00000269305|TP53;ENST00000505014.5_1_17:7578140-7579834:-|nuORF;nc|ENSG00000141510|P04637-2|TP53;nc|ENSG00000141510|P04637-3|TP53;nc|ENSG00000141510|P04637-4|TP53;nc|ENSG00000141510|P04637-5|TP53;nc|ENSG00000141510|P04637-6|TP53;TP53|p.C229Yfs*10|1|0.59|ENSG00000141510|chr17:7674276-7674277|AC/-|frameshift_variant;TP53|p.C242Afs*5|1|0.54|ENSG00000141510|chr17:7674240-7674240|G/-|frameshift_variant;TP53|p.E198Gfs*11|1|0.43|ENSG00000141510|chr17:7674938-7674939|-/C|frameshift_variant;TP53|p.E336Sfs*9|1|0.15|ENSG00000141510|chr17:7670704-7670704|A/-|frameshift_variant;TP53|p.G302Rfs*4|1|0.13|ENSG00000141510|chr17:7673717-7673718|-/G|frameshift_variant;TP53|p.H178Tfs*69|1|0.68|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant;TP53|p.I195Nfs*14|1|0.81|ENSG00000141510|chr17:7674947-7674948|-/T|frameshift_variant;TP53|p.P151Rfs*27|1|0.46|ENSG00000141510|chr17:7675153-7675160|GGGCGGGG/-|frameshift_variant;TP53|p.P153Afs*28|1|0.62|ENSG00000141510|chr17:7675156-7675157|-/G|frameshift_variant;TP53|p.P301Qfs*44|1|0.5|ENSG00000141510|chr17:7673718-7673718|G/-|frameshift_variant;TP53|p.P322Hfs*23|1|0.53|ENSG00000141510|chr17:7673563-7673563|G/-|frameshift_variant;TP53|p.Q331Sfs*6|1|0.66|ENSG00000141510|chr17:7673537-7673538|-/A|frameshift_variant;TP53|p.R280Kfs*59|1|0.41|ENSG00000141510|chr17:7673763-7673781|TCCTCTGTGCGCCGGTCTC/-|frameshift_variant;TP53|p.R290Kfs*53|1|0.62|ENSG00000141510|chr17:7673747-7673753|CTTGCGG/-|frameshift_variant;TP53|p.R335Lfs*10|1|0.74|ENSG00000141510|chr17:7670705-7670705|C/-|frameshift_variant;TP53|p.S127F|1|0.75|ENSG00000141510|chr17:7675232-7675232|G/A|missense_variant;TP53|p.S127T|1|0.68|ENSG00000141510|chr17:7675233-7675233|A/T|missense_variant	112.41091882917199	0.026537921851008135	3				NaN	NaN	0	NaN	3405	3572	6976
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6980	23.295	NaN	2402.5	30	0	480.18	0.106			+	50119	WHNVIRPN	8	56	518.2772640738389	1034.5399752144776	2	518.277099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_WHNVIRPN_	REV__ENSG00000148396|ENST00000684901|SEC16A;REV__nc|ENSG00000148396|O15027-2|SEC16A;REV__nc|ENSG00000148396|O15027-3|SEC16A;REV__nc|ENSG00000148396|O15027-4|SEC16A;REV__nc|ENSG00000148396|O15027-5|SEC16A;REV__SEC16A|p.P2155Hfs*25|1|0.25|ENSG00000148396|chr9:136447664-136447664|G/-|frameshift_variant;REV__SEC16A|p.P597Rfs*18|1|0.07|ENSG00000148396|chr9:136475826-136475826|G/-|frameshift_variant	25.450171626174864	0.7628259754767981	3				NaN	NaN	0	NaN	3406	3572	6976
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6981	23.297	NaN	2081	30	0	227.94	0.106			+	-1	VDTMKFREKA	10	50	414.21674554064793	1239.6284072221438	3	414.2159729003906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_VDTM(Oxidation (M))KFREKA_	REV__tr|U7SU44|U7SU44_FUSNUBifunctionalpurinebiosynthesisproteinPurHOS=FusobacteriumnucleatumCTI-5OX=1316586GN=purHPE=3SV=1	23.52269567125451	0.6877354443478558	3				NaN	NaN	0	NaN	3407	3572	6976
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6982	23.298	NaN	3758.9	30	0	637.72	0.106	+			16578	HFYEKPSY	8	60	535.7494783681063	1069.4844038030126	2	535.749755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HFYEKPSY_	ENST00000606893.5_1_6:110501354-110532119:+|nuORF	53.351449002276354	0.5676011784961348	3				NaN	NaN	0	NaN	3408	3572	6976
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6983	23.3	NaN	1510	30	0	502.32	0.029			+	29873	PLGPGGGG	8	38	306.1612109827763	610.3078690323526	2	306.16094970703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PLGPGGGG_	REV__ENSG00000215041|ENST00000399464|NEURL4;REV__nc|ENSG00000215041|Q96JN8-2|NEURL4;REV__NEURL4|p.G986R|1|0.44|ENSG00000215041|chr17:7321703-7321703|C/T|missense_variant;REV__NEURL4|p.L1256Cfs*12|2|0.27|ENSG00000215041|chr17:7318594-7318594|C/-|frameshift_variant	10.184766708764876	0.7843118145031319	3				NaN	NaN	0	NaN	3409	3572	6976
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6990	23.318	NaN	32494	30	0	8401.7	0.215			+	27304	MGSSFSSVGA	10	90	465.20531428041113	928.3960756276223	2	465.2051696777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MGSSFSSVGA_	REV__nc|ENSG00000187905|Q6ZQY2-2|LRRC74B	96.19043198914106	0.09563241103653833	3				NaN	NaN	0	NaN	3413	3575	6989
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6991	23.321	NaN	9427.3	30	0	1734	0.106	+			45269	TVQINQAI	8	61	443.7535264305755	885.492499927951	2	443.752685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVQINQAI_	nc|ENSG00000164037|Q4ZJI4-2|SLC9B1;nc|ENSG00000164037|Q4ZJI4-3|SLC9B1	49.44154591367651	0.597725784090933	3				NaN	NaN	0	NaN	3414	3575	6989
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6992	23.323	NaN	1907.1	30	0	244.6	0.106	+			43757	TLGDLDTVAG	10	57	481.24534197592567	NaN	0	480.7895202636719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TLGDLDTVAG_	ENSG00000178104|ENST00000695795|PDE4DIP;nc|ENSG00000178104|Q5VU43-13|PDE4DIP;nc|ENSG00000178104|Q5VU43-2|PDE4DIP;nc|ENSG00000178104|Q5VU43-3|PDE4DIP;nc|ENSG00000178104|Q5VU43-4|PDE4DIP;nc|ENSG00000178104|Q5VU43-6|PDE4DIP;nc|ENSG00000178104|Q5VU43-7|PDE4DIP;nc|ENSG00000178104|Q5VU43|PDE4DIP;PDE4DIP|p.E1085Ffs*6|1|0.06|ENSG00000178104|chr1:149001704-149001705|-/GTTCC|frameshift_variant;PDE4DIP|p.V841Lfs*4|1|0.41|ENSG00000178104|chr1:148978357-148978357|A/-|frameshift_variant	44.116797842482775	0.3427969396372342	3				NaN	NaN	0	NaN	3415	3575	6989
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6993	23.325	NaN	1989.2	30	0	232.53	0.106			+	1197	AEPGHGAKSL	10	57	483.75385979833726	965.4931666634745	2	483.7532043457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEPGHGAKSL_	REV__ENST00000478399.5_1_3:119298211-119298877:+|nuORF	65.46538089061403	0.31613324008013116	3				NaN	NaN	0	NaN	3416	3575	6989
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6994	23.327	NaN	1717.9	30	0	204.32	0.106			+	-1	WSRCLPGLVA	10	56	579.8096590227493	1157.6047651122985	2	579.8101806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_WSRC(Carbamidomethyl (C))LPGLVA_	REV__ENST00000465385.5_1_22:24125796-24126042:+|nuORF	32.81241826257853	0.6118718159329168	3				NaN	NaN	0	NaN	3417	3575	6989
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6995	23.329	NaN	3051.2	30	0	264.24	0.038			+	-1	LTSSPRFCMP	10	60	598.7763688638361	1195.538184794472	2	598.7760620117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))LTSSPRFCM(Oxidation (M))P_	REV__USHBP1|p.G112Lfs*16|1|0.25|ENSG00000130307|chr19:17262861-17262862|-/GG|frameshift_variant	37.81151784470057	0.569310847604193	3				NaN	NaN	0	NaN	3418	3575	6989
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6996	23.329	NaN	3445.5	30	0	943.99	0.145	+			42293	TAEISVPFRV	10	45	373.5439615180749	NaN	0	373.5440368652344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TAEISVPFRV_	ENST00000430559.5_1_13:108922691-108955654:+|nuORF;ENST00000479435.1_1_13:108922691-108939174:+|nuORF	28.081489160057373	0.40797012399963245	3				NaN	NaN	0	NaN	3419	3575	6989
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7004	23.351	NaN	13582	30	0	1734.8	0.215	+			3674	ASYTKIVVK	9	75	504.80820283378966	1007.6018527343793	2	504.8077697753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASYTKIVVK_	ENSG00000141252|ENST00000437048|VPS53;ENST00000541903.6_1_17:422370-426182:-|nuORF	150.81021883065287	0.006680279908938716	3				NaN	NaN	0	NaN	3424	3578	7003
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7005	23.355	NaN	5277.7	30	0	508.21	0.106	+			48014	VSQVGKEL	8	60	430.24793342268566	858.4813139121713	2	430.24755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSQVGKEL_	ENSG00000168209|ENST00000307365|DDIT4	120.8684288430529	0.23331381154069358	3				NaN	NaN	0	NaN	3425	3578	7003
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7006	23.356	NaN	2810	30	0	512.06	0.106			+	32156	QSPREILAK	9	57	521.3066016258393	1040.5986503184786	2	521.306884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QSPREILAK_	REV__ENSG00000067369|ENST00000382044|TP53BP1;REV__ENST00000411772.5_2_15:43699583-43738985:-|nuORF;REV__ENST00000572085.5_1_15:43707600-43785241:-|nuORF;REV__nc|ENSG00000067369|Q12888-3|TP53BP1;REV__nc|ENSG00000067369|Q12888|TP53BP1;REV__TP53BP1|p.D1461Rfs*12|1|0.37|ENSG00000067369|chr15:43420584-43420591|GAGAGTCA/-|frameshift_variant	37.50817390946774	0.44948750990682723	3				NaN	NaN	0	NaN	3426	3578	7003
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7007	23.358	NaN	6448.3	30	0	1014.6	0.106			+	10181	ETAKLFEELTV	11	72	640.341715465607	1278.6688779980138	2	640.3414306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ETAKLFEELTV_	REV__ENSG00000070081|ENST00000529010|NUCB2;REV__nc|ENSG00000070081|P80303-2|NUCB2;REV__NUCB2|p.K400Nfs*15|2|0.29|ENSG00000070081|chr11:17330921-17330921|A/-|frameshift_variant	31.529811441608018	0.6590691889962369	3				NaN	NaN	0	NaN	3427	3578	7003
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7008	23.36	NaN	4277.6	30	0	710.08	0.106	+			21477	KNIKELYSL	9	64	369.88532666158255	1106.6341505849477	3	369.88519287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KNIKELYSL_	tr|U7SG92|U7SG92_FUSNUExonucleaseSbcCOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02225PE=4SV=1	47.657333605630114	0.33044192980041115	3				NaN	NaN	0	NaN	3428	3578	7003
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7009	23.362	NaN	1462.4	30	0	178	0.106	+			24911	LKNYKVTEL	9	51	554.3242414677261	1106.633930002252	2	554.323486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LKNYKVTEL_	tr|U7T3T2|U7T3T2_FUSNUPeptidechainreleasefactor2OS=FusobacteriumnucleatumCTI-5OX=1316586GN=prfBPE=3SV=1	52.936696900407355	0.27249468807391813	3				NaN	NaN	0	NaN	3429	3578	7003
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7010	23.364	NaN	1561.5	30	0	225.48	0.033	+			2835	ASAGVAVYR	9	47	447.24561216062637	892.4766713880528	2	447.2447814941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASAGVAVYR_	ENSG00000070159|ENST00000374541|PTPN3;nc|ENSG00000070159|P26045-2|PTPN3;nc|ENSG00000070159|P26045-3|PTPN3;PTPN3|p.P658Afs*20|1|0.15|ENSG00000070159|chr9:109391544-109391545|-/T|frameshift_variant	34.172542307311794	0.4838870758800184	3				NaN	NaN	0	NaN	3430	3578	7003
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7017	23.38	NaN	5544.7	30	0	859.4	0.214	+			35841	SEDEPTRSL	9	69	517.2435190190911	1032.472485104982	2	517.2433471679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEDEPTRSL_	ENSG00000083312|ENST00000337273|TNPO1;ENSG00000105576|ENST00000425528|TNPO2;ENST00000588484.1_1_19:12826020-12830096:-|nuORF;ENST00000589956.5_1_19:12822112-12831764:-|nuORF;nc|ENSG00000083312|Q92973-2|TNPO1;nc|ENSG00000105576|O14787-2|TNPO2;TNPO1|p.C844Vfs*45|4|0.31|ENSG00000083312|chr5:72903718-72903718|T/-|frameshift_variant;TNPO2|p.H347Pfs*4|1|0.35|ENSG00000105576|chr19:12711373-12711374|-/G|frameshift_variant	101.25262130126117	0.03792372629710479	3				NaN	NaN	0	NaN	3434	3581	7016
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7018	23.384	NaN	2406.7	30	0	905.77	0.106			+	45470	TYCYKLKVI	9	34	377.54819145781846	1129.6227449736555	3	377.88104248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TYCYKLKVI_	REV__ENSG00000188706|ENST00000357166|ZDHHC9;REV__ZDHHC9|p.K145N|1|0.69|ENSG00000188706|chrX:129823731-129823731|C/A|missense_variant	39.252832667884924	0.4290233611298554	3				NaN	NaN	0	NaN	3435	3581	7016
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7019	23.386	NaN	1954.9	30	0	576.71	0.106				-1	MFVGGCVA	8	47	420.69072572243437	839.3668985116688	2	420.6903991699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_MFVGGC(Carbamidomethyl (C))VA_	ENSG00000089057|ENST00000338244|SLC23A2;nc|ENSG00000089057|Q9UGH3-2|SLC23A2	16.704963439144045	0.7946246187734944	3				NaN	NaN	0	NaN	3436	3581	7016
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7020	23.387	NaN	2058.9	30	0	411.04	0.106			+	48030	VSRLYKEI	8	37	336.5345490397291	1006.5818177193873	3	336.5342102050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSRLYKEI_	REV__ENSG00000197892|ENST00000524189|KIF13B	20.481830146152948	0.8005983782650069	3				NaN	NaN	0	NaN	3437	3581	7016
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7021	23.389	NaN	3549.1	30	0	1801.2	0.106			+	47802	VSIIKVGDKQL	11	43	400.5837326323956	1198.7293684973868	3	400.5834045410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSIIKVGDKQL_	REV__ENSG00000172752|ENST00000373157|COL6A5;REV__nc|ENSG00000172752|A8TX70-2|COL6A5;REV__nc|ENSG00000172752|A8TX70|COL6A5	28.5767321226876	0.690044582712672	3				NaN	NaN	0	NaN	3438	3581	7016
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7022	23.391	NaN	1214.2	30	0	165.94	0.035			+	16755	HLSGTAIAIV	10	50	491.29001165155137	NaN	0	491.28985595703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HLSGTAIAIV_	REV__ENSG00000128731|ENST00000261609|HERC2	51.33545320467046	0.297159550775418	3				NaN	NaN	0	NaN	3439	3581	7016
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7027	23.405	NaN	14486	30	0	1358.5	0.214	+			40759	SVDKLVIQK	9	83	515.3190040141593	1028.6234550951185	2	515.3190307617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVDKLVIQK_	ENST00000523612.1_1_8:142469282-142469963:+|nuORF	126.24258497203832	0.01742065577488747	3				NaN	NaN	0	NaN	3441	3584	7026
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7028	23.409	NaN	4203.9	30	0	781.99	0.106	+			26809	LVSPEQPPK	9	64	497.7823015452684	993.5500501573368	2	497.78173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LVSPEQPPK_	ENSG00000079819|ENST00000337057|EPB41L2;nc|ENSG00000079819|O43491-2|EPB41L2;nc|ENSG00000079819|O43491-3|EPB41L2;nc|ENSG00000079819|O43491-4|EPB41L2	62.107414245175825	0.1960472003779324	3				NaN	NaN	0	NaN	3442	3584	7026
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7029	23.411	NaN	3433.5	30	0	1673	0.106				-1	 	0	53	439.25338017074574	876.4922074082915	2	440.2556457519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3443	3584	7026
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7030	23.412	NaN	12175	30	0	3377.1	0.106	+			40760	SVDKLVIQK	9	61	343.8817832225442	1028.6235202678326	3	343.8816833496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVDKLVIQK_	ENST00000523612.1_1_8:142469282-142469963:+|nuORF	62.107414245175825	0.1960472003779324	3				NaN	NaN	0	NaN	3444	3584	7026
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7031	23.414	NaN	4676.2	30	0	428.39	0.106	+			1443	AEYSTKNNAL	10	75	555.775356516064	1109.536160098928	2	555.775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEYSTKNNAL_	ENSG00000129128|ENST00000503362|SPCS3;ENST00000507678.5_1_4:177243228-177249478:+|nuORF;ENST00000513139.1_1_4:177241188-177248429:+|nuORF	88.17693792209575	0.14151128060301246	3				NaN	NaN	0	NaN	3445	3584	7026
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7032	23.416	NaN	3713.3	30	0	1995.4	0.106	+			35453	SASQLQIHG	9	61	470.74625159914905	939.4779502650981	2	470.7454833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SASQLQIHG_	ENSG00000197647|ENST00000550507|ZNF433;nc|ENSG00000197647|Q8N7K0-2|ZNF433;nc|ENSG00000197647|Q8N7K0|ZNF433	30.503639358989545	0.5181749237905803	3				NaN	NaN	0	NaN	3446	3584	7026
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7033	23.418	NaN	3918.8	30	0	349.51	0.036	+			44641	TTFTKIVNK	9	69	526.3109708836507	1050.6073888341014	2	526.310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TTFTKIVNK_	ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1670Tfs*23|1|0.29|ENSG00000174231|chr17:1659487-1659487|C/-|frameshift_variant	87.69643885390035	0.07135982304947239	3				NaN	NaN	0	NaN	3447	3584	7026
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7041	23.436	NaN	24930	30	0	4617.1	0.214	+			36408	SETNDTKVL	9	83	503.75640801873993	1005.4982631042799	2	503.7560119628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SETNDTKVL_	ENSG00000111057|ENST00000388835|KRT18;ENST00000453838.2_1_1:182928211-182928406:-|nuORF	141.52041321563706	0.009766778904176347	3				NaN	NaN	0	NaN	3452	3587	7040
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7042	23.439	NaN	2744.4	30	0	644.54	0.106	+			8100	DYEIKGYEI	9	62	565.2740411865158	1128.5335294398315	2	565.27392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DYEIKGYEI_	tr|U7T2I3|U7T2I3_FUSNUCobyricacidsynthaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=cobQPE=3SV=1	40.77816245573522	0.41113185337114944	3				NaN	NaN	0	NaN	3453	3587	7040
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7043	23.441	NaN	3124.8	30	0	806.68	0.106	+			17882	IGATPVQPLGV	11	40	351.20996190147685	1050.6080563046305	3	351.20953369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IGATPVQPLGV_	ENSG00000176463|ENST00000318445|SLCO3A1;ENST00000553653.5_1_15:92397138-92694297:+|nuORF;nc|ENSG00000176463|Q9UIG8-2|SLCO3A1;nc|ENSG00000176463|Q9UIG8-3|SLCO3A1;SLCO3A1-ATPBD4|1|fusion;SLCO3A1-ATPBD4|2|fusion;SLCO3A1|p.L323Wfs*13|1|0.29|ENSG00000176463|chr15:92104496-92104496|C/-|frameshift_variant	21.9598887501803	0.7594498734240387	3				NaN	NaN	0	NaN	3454	3587	7040
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7044	23.443	NaN	2488.7	30	0	381.98	0.106				-1	 	0	56	436.24769637678935	435.24041991018936	1	436.2474670410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3455	3587	7040
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7045	23.445	NaN	3030.9	30	0	499.6	0.106			+	26017	LSLDRVPAE	9	64	500.2781062122167	998.5416594912334	2	500.77978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSLDRVPAE_	REV__ENST00000474615.1_1_3:8811035-8811122:-|nuORF	32.81241826257853	0.4965981579233955	3				NaN	NaN	0	NaN	3456	3587	7040
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7046	23.447	NaN	1609.7	30	0	162.11	0.106	+			2291	AMAIRDSAGG	10	53	474.73226050844806	947.4499680836961	2	474.7311096191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AMAIRDSAGG_	ENSG00000164379|ENST00000296839|FOXQ1	56.72105179125745	0.3956618550748046	3				NaN	NaN	0	NaN	3457	3587	7040
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7047	23.449	NaN	1889.5	30	0	333.74	0.032				-1	 	0	52	413.2455871360477	824.4766213388954	2	413.2449035644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3458	3587	7040
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7055	23.467	NaN	6101.5	30	0	884.51	0.214	+			10515	EVYAGSHQY	9	68	527.2356525047298	1052.4567520762596	2	527.2359008789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EVYAGSHQY_	ENSG00000182827|ENST00000366812|ACBD3	95.81516180277367	0.04847050768394289	3				NaN	NaN	0	NaN	3463	3590	7054
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7056	23.47	NaN	2870.6	30	0	1022.4	0.106	+			35492	SATQAVFQK	9	56	490.2644201593878	978.5142873855756	2	490.2637023925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SATQAVFQK_	ENSG00000100949|ENST00000216840|RABGGTA;ENST00000558534.5_1_14:24738716-24740321:-|nuORF;ENST00000560998.5_1_14:24737570-24740321:-|nuORF;RABGGTA|p.P160Lfs*5|1|0.17|ENSG00000100949|chr14:24269643-24269643|G/-|frameshift_variant;RABGGTA|p.Q194Sfs*43|1|0.31|ENSG00000100949|chr14:24269542-24269542|G/-|frameshift_variant	80.91624569148213	0.09358672614454815	3				NaN	NaN	0	NaN	3464	3590	7054
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7057	23.472	NaN	2489.9	30	0	814.23	0.106			+	47000	VKSTGEVK	8	51	424.2479125825112	846.4812722318225	2	424.2475891113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VKSTGEVK_	REV__ENST00000553646.1_1_14:75375979-75376912:-|nuORF;REV__ENST00000555834.5_1_14:75375979-75389943:-|nuORF	56.72105179125745	0.5342425954139568	3				NaN	NaN	0	NaN	3465	3590	7054
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7058	23.474	NaN	1185.1	30	0	131.98	0.106			+	27459	MLMYIVVT	8	44	485.259773430515	968.50499392783	2	485.2583312988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MLMYIVVT_	REV__ACSS3|p.P176L|1|0.23|ENSG00000111058|chr12:81134886-81134886|C/T|missense_variant	39.021493756699265	0.6623843612266921	3				NaN	NaN	0	NaN	3466	3590	7054
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7059	23.476	NaN	1598.4	30	0	205.2	0.106	+			45717	VAAQNGIL	8	48	393.2297525532286	784.4449521732572	2	393.22918701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VAAQNGIL_	ENSG00000123191|ENST00000242839|ATP7B;nc|ENSG00000123191|P35670-2|ATP7B;nc|ENSG00000123191|P35670-3|ATP7B;nc|ENSG00000123191|P35670-4|ATP7B	57.452649787351945	0.526999880452039	3				NaN	NaN	0	NaN	3467	3590	7054
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7060	23.478	NaN	991.37	30	0	98.505	0.106			+	-1	SVMVRSLTH	9	54	523.2745019615886	1044.5344509899771	2	523.2747802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_SVM(Oxidation (M))VRSLTH_	REV__ENSG00000137474|ENST00000409709|MYO7A;REV__ENST00000481328.7_1_11:76905078-76923312:+|nuORF;REV__nc|ENSG00000137474|Q13402-2|MYO7A;REV__nc|ENSG00000137474|Q13402-5|MYO7A;REV__nc|ENSG00000137474|Q13402-6|MYO7A;REV__nc|ENSG00000137474|Q13402-7|MYO7A;REV__nc|ENSG00000137474|Q13402-8|MYO7A	47.657333605630114	0.33044192980041115	3				NaN	NaN	0	NaN	3468	3590	7054
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7061	23.479	NaN	2174.1	30	0	196.77	0.034	+			17283	IAASRSAVM	9	51	453.24766970602434	904.4807864788487	2	453.2471618652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IAASRSAVM_	ENSG00000119280|ENST00000366663|C1orf198	39.252832667884924	0.4290233611298554	3				NaN	NaN	0	NaN	3469	3590	7054
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7069	23.497	NaN	2244	30	0	188.43	0.214	+			38005	SPLKTTSSY	9	62	492.2561133552799	982.4976737773599	2	492.25555419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SPLKTTSSY_	ENSG00000124429|ENST00000262753|POF1B;nc|ENSG00000124429|Q8WVV4-1|POF1B;nc|ENSG00000124429|Q8WVV4-3|POF1B;POF1B|p.T130Lfs*12|1|0.14|ENSG00000124429|chrX:85359600-85359601|-/AG|frameshift_variant	112.10723106719422	0.02684780151337622	3				NaN	NaN	0	NaN	3474	3593	7068
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7070	23.501	NaN	2777.8	30	0	458.85	0.106	+			43126	TERPQPQTL	9	57	535.2872719395956	1068.559990945991	2	535.2857055664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TERPQPQTL_	ENSG00000104671|ENST00000221114|DCTN6	39.873155843976775	0.4217472186153936	3				NaN	NaN	0	NaN	3475	3593	7068
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7071	23.503	NaN	3624.9	30	0	966.76	0.106			+	-1	EAAAMLQKLV	10	71	545.3037257204253	NaN	0	545.3026733398438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_EAAAM(Oxidation (M))LQKLV_	REV__CLGN|p.H500Tfs*2|1|0.22|ENSG00000153132|chr4:140392372-140392373|-/T|frameshift_variant;REV__ENSG00000153132|ENST00000325617|CLGN;REV__nc|ENSG00000153132|O14967-2|CLGN	31.529811441608018	0.39664753963064203	3				NaN	NaN	0	NaN	3476	3593	7068
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7072	23.505	NaN	4460.3	30	0	2089.1	0.106			+	23465	LAEKESQI	8	59	459.25078088422543	916.4870088352509	2	459.2503356933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LAEKESQI_	REV__ENSG00000135968|ENST00000309863|GCC2	31.954861631926434	0.7126016770032289	3				NaN	NaN	0	NaN	3477	3593	7068
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7073	23.506	NaN	4258.3	30	0	435.46	0.106	+			16469	HETGTKITI	9	66	500.2781062122167	998.5416594912334	2	500.27728271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HETGTKITI_	ENSG00000073792|ENST00000382199|IGF2BP2;ENST00000496495.1_1_3:185393074-185393625:-|nuORF;ENST00000550858.1_1_12:42681476-42682067:+|nuORF;nc|ENSG00000073792|Q9Y6M1-1|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-3|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-4|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-5|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-6|IGF2BP2	75.04331003522576	0.118981335847003	3				NaN	NaN	0	NaN	3478	3593	7068
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7074	23.508	NaN	1721.6	30	0	539.32	0.106	+			26596	LTVSMDQRLE	10	55	596.3059969407362	1190.5974409482724	2	596.3053588867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LTVSMDQRLE_	ENSG00000138002|ENST00000260570|IFT172	40.05817265558897	0.5486090488315611	3				NaN	NaN	0	NaN	3479	3593	7068
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7075	23.51	NaN	1659.6	30	0	296.94	0.037	+			44220	TRMYETKLK	9	51	585.3194725036396	1168.6243920740792	2	585.319091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TRMYETKLK_	CEP290|p.I2385*|1|0.37|ENSG00000198707|chr12:88050410-88050410|T/-|frameshift_variant;CEP290|p.L2448Tfs*8|1|0.11|ENSG00000198707|chr12:88049282-88049283|-/T|frameshift_variant;CEP290|p.R2306Nfs*40|1|0.14|ENSG00000198707|chr12:88055616-88055619|TCTC/-|frameshift_variant;ENSG00000198707|ENST00000552810|CEP290	23.37791116691581	0.584768640752637	3				NaN	NaN	0	NaN	3480	3593	7068
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7082	23.527	NaN	15650	30	0	5010.4	0.214	+			18029	IINSSITTK	9	67	488.787692351036	975.560831768872	2	488.78704833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IINSSITTK_	CCT3|p.A379Lfs*9|1|0.21|ENSG00000163468|chr1:156312061-156312061|C/-|frameshift_variant;CCT3|p.K197Nfs*23|1|0.17|ENSG00000163468|chr1:156320857-156320857|T/-|frameshift_variant;CCT3|p.L350Ffs*9|1|0.49|ENSG00000163468|chr1:156312146-156312147|-/A|frameshift_variant;ENSG00000163468|ENST00000295688|CCT3;nc|ENSG00000163468|P49368-2|CCT3	79.48907831485694	0.09975780661107167	3				NaN	NaN	0	NaN	3484	3596	7081
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7083	23.53	NaN	6227.3	30	0	1458.8	0.106	+			47061	VLGPTPVQK	9	57	469.78743942219614	937.5603259111923	2	469.78668212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VLGPTPVQK_	ENSG00000166225|ENST00000549921|FRS2	42.396135135203025	0.392153681582562	3				NaN	NaN	0	NaN	3485	3596	7081
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7084	23.532	NaN	5391.1	30	0	928.71	0.106	+			16712	HLDGDRAF	8	61	465.7252047341663	929.4358565351326	2	465.7249755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HLDGDRAF_	ENSG00000008710|ENST00000262304|PKD1;ENST00000471603.6_1_16:2149506-2153410:-|nuORF;ENST00000480227.5_1_16:2149506-2153780:-|nuORF;ENST00000532739.1_1_16:16465196-16470832:+|nuORF;ENST00000537112.5_1_16:16421763-16427707:+|nuORF;ENST00000541836.5_1_16:15021147-15029115:+|nuORF;nc|ENSG00000008710|P98161-2|PKD1;nc|ENSG00000008710|P98161-3|PKD1	42.47446043378293	0.6409579893742323	3				NaN	NaN	0	NaN	3486	3596	7081
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7085	23.534	NaN	5635.5	30	0	619.24	0.106			+	7235	DALHVKGKY	9	81	515.7880451193054	1029.5615373054106	2	515.78759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DALHVKGKY_	REV__sp|P16793|UL52_HCMVAPackagingproteinUL32homologOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL52PE=3SV=1;REV__sp|Q6SW79|UL52_HCMVMPackagingproteinUL32homologOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL52PE=3SV=1	40.77816245573522	0.41113185337114944	3				NaN	NaN	0	NaN	3487	3596	7081
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7086	23.536	NaN	1058.1	30	0	75.097	0.106			+	38064	SPSKQLFSK	9	53	511.2866534838307	1020.5587540344615	2	511.2864685058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SPSKQLFSK_	REV__ENSG00000188338|ENST00000614032|SLC38A3;REV__SLC38A3|p.G45D|1|0.31|ENSG00000188338|chr3:50214434-50214434|G/A|missense_variant;REV__SLC38A3|p.I469Sfs*13|1|0.24|ENSG00000188338|chr3:50219971-50219971|C/-|frameshift_variant	60.11826168202944	0.21262886028301267	3				NaN	NaN	0	NaN	3488	3596	7081
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7087	23.537	NaN	819.42	30	0	56.784	0.106			+	50914	YGLCISVPL	9	46	482.7640686035156	NaN	0	482.7640686035156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YGLCISVPL_	REV__ENST00000258341.4_1_1:183113986-183114169:+|nuORF	37.81151784470057	0.28666463014928195	3				NaN	NaN	0	NaN	3489	3596	7081
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7088	23.539	NaN	1542.9	30	0	359.5	0.035	+			50779	YELVTGRR	8	49	497.27618719316723	NaN	0	497.2763977050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YELVTGRR_	ARID5A|p.R213Gfs*55|1|0.21|ENSG00000196843|chr2:96551159-96551159|C/-|frameshift_variant;ENSG00000196843|ENST00000357485|ARID5A;nc|ENSG00000196843|Q03989-5|ARID5A	24.20275056022122	1.7418937515398478	3				NaN	NaN	0	NaN	3490	3596	7081
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7093	23.554	NaN	1552.6	30	0	70.927	0.214	+			43050	TELGRAAKL	9	53	479.787522061497	NaN	0	479.7871398925781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TELGRAAKL_	ENSG00000117592|ENST00000340385|PRDX6;ENST00000460950.1_1_1:173446500-173450645:+|nuORF;PRDX6|p.K125Rfs*5|1|0.38|ENSG00000117592|chr1:173485479-173485479|A/-|frameshift_variant	40.77816245573522	0.2702456086868081	3				NaN	NaN	0	NaN	3492	3599	7092
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7094	23.557	NaN	2997.9	30	0	365.18	0.106			+	13940	GRSYDWLTL	9	68	555.7830543428823	1109.5515557525646	2	555.7826538085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GRSYDWLTL_	REV__WDR5B|p.K235T|1|0.07|ENSG00000196981|chr3:122414825-122414825|T/G|missense_variant	36.446750945000026	0.4619375763483977	3				NaN	NaN	0	NaN	3493	3599	7092
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7095	23.559	NaN	1887.8	30	0	260.8	0.106	+			44458	TSPGSPKTM	9	51	453.2239120437236	904.4332711542472	2	453.223388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TSPGSPKTM_	PRKAG2|p.V105M|1|0.25|ENSG00000106617|chr7:151781305-151781305|C/T|missense_variant	35.61828744233558	0.47037581924408073	3				NaN	NaN	0	NaN	3494	3599	7092
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7096	23.561	NaN	1622.5	30	0	114.2	0.106	+			48516	VTNIGNQQI	9	58	493.76692390605604	NaN	0	493.76666259765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTNIGNQQI_	ENSG00000136021|ENST00000360820|SCYL2;ENST00000392253.2_1_2:202275976-202276645:-|nuORF	36.446750945000026	0.29355505452396785	3				NaN	NaN	0	NaN	3495	3599	7092
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7097	23.563	NaN	1199.5	30	0	382.39	0.039			+	11440	FLYIYDEQGK	10	38	638.3151731699129	1274.6157934066257	2	638.3155517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FLYIYDEQGK_	REV__ENSG00000213160|ENST00000392647|KLHL23	20.94693142431847	0.7087701759873708	3				NaN	NaN	0	NaN	3496	3599	7092
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7105	23.581	NaN	2679.1	30	0	564.64	0.214	+			44772	TTPTSLNIG	9	61	452.24344206876924	902.4723312043385	2	452.2426452636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTPTSLNIG_	ENST00000366197.9_1_19:57910793-57911177:+|nuORF;ZNF548|p.F346Lfs*163|1|0.22|ENSG00000188785|chr19:57399320-57399320|T/-|frameshift_variant	54.776311868738084	0.25715957988447635	3				NaN	NaN	0	NaN	3501	3602	7104
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7106	23.584	NaN	1977.9	30	0	265.61	0.106	+			42205	TAAGHRLR	8	51	441.2581871714586	NaN	0	441.2583923339844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAAGHRLR_	ENST00000259351.9_1_9:129677065-129724587:+|nuORF	55.50420428727701	1.7418937515398478	3				NaN	NaN	0	NaN	3502	3602	7104
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7107	23.586	NaN	977.12	30	0	209.49	0.106	+			34015	RSKAAWEAGK	10	55	552.3037677038968	NaN	0	552.305908203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RSKAAWEAGK_	ENSG00000075239|ENST00000265838|ACAT1;ENST00000531813.5_1_11:108004986-108013306:+|nuORF;ENST00000532792.5_1_11:108009720-108014786:+|nuORF	35.15202426646627	0.38475398474706135	3				NaN	NaN	0	NaN	3503	3602	7104
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7108	23.588	NaN	846.54	30	0	63.817	0.034	+			28688	NMEKATLP	8	45	473.2397922599184	NaN	0	473.239990234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))NMEKATLP_	ADGRB1|p.T950M|1|0.24|ENSG00000181790|chr8:142518169-142518169|C/T|missense_variant;ENSG00000181790|ENST00000517894|ADGRB1;ENST00000518820.1_1_8:143561046-143604069:+|nuORF	45.9519527083369	1.7418937515398478	3				NaN	NaN	0	NaN	3504	3602	7104
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7114	23.603	NaN	6866.1	30	0	2486.9	0.214			+	32145	QSPAKAIPGK	10	51	332.8660675429818	NaN	0	332.86602783203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QSPAKAIPGK_	REV__YTHDF2|p.V284I|1|0.26|ENSG00000198492|chr1:28743120-28743120|G/A|missense_variant	26.69291269510374	0.4125295221340092	3				NaN	NaN	0	NaN	3507	3605	7113
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7115	23.606	NaN	1481.2	30	0	566.85	0.035	+			38100	SPVLRLFF	8	36	326.86268498473385	NaN	0	326.86273193359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SPVLRLFF_	F9|p.C157Vfs*46|1|0.3|ENSG00000101981|chrX:139548438-139548438|C/-|frameshift_variant;F9|p.N147Kfs*60|1|0.03|ENSG00000101981|chrX:139548411-139548412|-/GTACATGGAAC|frameshift_variant	30.503639358989545	1.7418937515398478	3				NaN	NaN	0	NaN	3508	3605	7113
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7123	23.625	NaN	2579.4	30	0	553.29	0.214				-1	 	0	49	436.24769637678935	435.24041991018936	1	438.25115966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3513	3608	7122
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7124	23.628	NaN	2770.3	30	0	855.25	0.106			+	28237	NCSVLIREI	9	51	349.5263570036411	1045.5572416111233	3	349.52593994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NCSVLIREI_	REV__ENSG00000102606|ENST00000646102|ARHGEF7;REV__nc|ENSG00000102606|Q14155-1|ARHGEF7;REV__nc|ENSG00000102606|Q14155-2|ARHGEF7;REV__nc|ENSG00000102606|Q14155-3|ARHGEF7;REV__nc|ENSG00000102606|Q14155-5|ARHGEF7;REV__nc|ENSG00000102606|Q14155-6|ARHGEF7;REV__nc|ENSG00000102606|Q14155|ARHGEF7	26.69291269510374	0.5537881896960711	3				NaN	NaN	0	NaN	3514	3608	7122
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7125	23.63	NaN	1251.3	30	0	117.57	0.106	+			6848	CIVSFKFF	8	52	495.7598327328118	989.5051125324236	2	495.7586669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_CIVSFKFF_	ENST00000522596.6_1_3:169513152-169513446:-|nuORF	74.51659920185547	0.36926395944126233	3				NaN	NaN	0	NaN	3515	3608	7122
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7126	23.632	NaN	2662.9	30	0	635.69	0.106	+			21213	KLFNTSGKI	9	61	504.29929888605983	1006.5840448389197	2	504.29864501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KLFNTSGKI_	tr|U7SHE5|U7SHE5_FUSNUMORNrepeatproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02282PE=4SV=1	37.81151784470057	0.4459294069877048	3				NaN	NaN	0	NaN	3516	3608	7122
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7127	23.634	NaN	1221.3	30	0	209.98	0.106	+			15060	GTNVNMPVSK	10	59	523.7692809534199	1045.5240089736396	2	523.7698364257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTNVNMPVSK_	ENSG00000149658|ENST00000370339|YTHDF1	41.080066990542036	0.5391928043837881	3				NaN	NaN	0	NaN	3517	3608	7122
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7128	23.635	NaN	1041.9	30	0	98.604	0.106	+			26659	LVEVEGLDGDI	11	54	579.799845126182	NaN	0	579.8004760742188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LVEVEGLDGDI_	tr|U7SJR1|U7SJR1_FUSNUAlpha-2-macroglobulindomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02061PE=3SV=1	39.252832667884924	0.39048276625972167	3				NaN	NaN	0	NaN	3518	3608	7122
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7129	23.637	NaN	1763.5	30	0	531.57	0.037	+			31751	QPDRGEDAIAA	11	39	381.51994233454815	NaN	0	381.51971435546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QPDRGEDAIAA_	ENSG00000166145|ENST00000562057|SPINT1;nc|ENSG00000166145|O43278|SPINT1;SPINT1|p.K371Nfs*82|1|0.38|ENSG00000166145|chr15:40854517-40854517|A/-|frameshift_variant	18.531049691330335	0.456735970842152	3				NaN	NaN	0	NaN	3519	3608	7122
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7134	23.652	NaN	7764.8	30	0	1331.1	0.214			+	-1	LPAGAALLAR	10	57	332.20661390047286	993.5980123016186	3	332.20635986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LPAGAALLAR_	REV__SCNN1D|p.S19Lfs*90|1|0.29|ENSG00000162572|chr1:1284070-1284071|-/G|frameshift_variant	35.15202426646627	0.5927656479315102	3				NaN	NaN	0	NaN	3521	3611	7133
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7135	23.655	NaN	3811.1	30	0	860.26	0.106			+	29054	NTGIAPGVP	9	51	413.2274525496389	824.4403521660778	2	413.22698974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NTGIAPGVP_	REV__ENSG00000139793|ENST00000679496|MBNL2;REV__nc|ENSG00000139793|Q5VZF2-2|MBNL2;REV__nc|ENSG00000139793|Q5VZF2-3|MBNL2;REV__nc|ENSG00000139793|Q5VZF2|MBNL2	35.61828744233558	0.47037581924408073	3				NaN	NaN	0	NaN	3522	3611	7133
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7136	23.657	NaN	3195.8	30	0	504.22	0.106	+			48267	VTDHNLHEL	9	56	539.2705503727769	1076.5265478123538	2	539.7725219726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTDHNLHEL_	ENSG00000177971|ENST00000403490|IMP3	63.53385203322761	0.18415635464017938	3				NaN	NaN	0	NaN	3523	3611	7133
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7137	23.659	NaN	4683.9	30	0	1422.9	0.106				-1	 	0	49	359.84942800603835	1076.526454618315	3	359.84918212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3524	3611	7133
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7138	23.661	NaN	1343.2	30	0	352.09	0.106			+	-1	YMAILMVPL	9	51	533.7868780390176	1065.559203144835	2	533.786376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_YMAILM(Oxidation (M))VPL_	REV__ENSG00000105668|ENST00000222275|UPK1A	39.021493756699265	0.43173687394350213	3				NaN	NaN	0	NaN	3525	3611	7133
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7139	23.662	NaN	2487.4	30	0	581.03	0.106	+			4936	ATQQEFYAK	9	70	543.267688185282	1084.520823437364	2	543.2683715820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATQQEFYAK_	ENSG00000130787|ENST00000253083|HIP1R;ENST00000538236.1_1_12:123344649-123345071:+|nuORF;HIP1R|p.E1021Vfs*2|1|0.32|ENSG00000130787|chr12:122861412-122861445|AGAGGAGGTGGCCATCCGGCCCAGCACTGCCCCC/-|frameshift_variant	54.722347961057174	0.257609425301511	3				NaN	NaN	0	NaN	3526	3611	7133
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7140	23.664	NaN	2836.5	30	0	510.13	0.035	+			13787	GQHTVLLVK	9	53	497.80680864050277	993.5990643478056	2	497.8060302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GQHTVLLVK_	ENSG00000180198|ENST00000683442|RCC1;nc|ENSG00000180198|P18754-2|RCC1	56.632244143249146	0.24168844994051353	3				NaN	NaN	0	NaN	3527	3611	7133
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7148	23.682	NaN	5601.2	30	0	627.93	0.214			+	26429	LTGKDLVVQ	9	65	486.7899570232772	971.5653611133545	2	486.79010009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LTGKDLVVQ_	REV__ENSG00000010165|ENST00000361735|METTL13;REV__METTL13|p.L636Pfs*8|1|0.12|ENSG00000010165|chr1:171796557-171796558|-/C|frameshift_variant;REV__nc|ENSG00000010165|Q8N6R0-1|METTL13;REV__nc|ENSG00000010165|Q8N6R0-2|METTL13;REV__nc|ENSG00000010165|Q8N6R0-3|METTL13;REV__nc|ENSG00000010165|Q8N6R0-4|METTL13	49.536043120802724	0.308405419312776	3				NaN	NaN	0	NaN	3532	3614	7147
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7149	23.686	NaN	11041	30	0	2170.9	0.106			+	-1	LCICLIAAVAA	11	77	373.2093190963626	1116.6061278892878	3	373.2085876464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LC(Carbamidomethyl (C))ICLIAAVAA_	REV__ENST00000509734.5_2_5:68665744-68666026:+|nuORF	41.42661286455405	0.5384226294179143	3				NaN	NaN	0	NaN	3533	3614	7147
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7150	23.688	NaN	1950.7	30	0	380.3	0.106	+			37471	SLKHSTTL	8	46	443.7535264305755	885.492499927951	2	443.7536315917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLKHSTTL_	ENSG00000064490|ENST00000303088|RFXANK;ENST00000541873.6_1_19:19304755-19309594:+|nuORF;ENST00000543157.7_1_19:19304755-19307890:+|nuORF;ENST00000545522.2_1_19:19304755-19308134:+|nuORF;nc|ENSG00000064490|O14593-2|RFXANK;nc|ENSG00000064490|O14593-3|RFXANK;RFXANK|p.H151Pfs*30|1|0.26|ENSG00000064490|chr19:19198114-19198115|-/C|frameshift_variant	40.5726180659479	0.6527593143185008	3				NaN	NaN	0	NaN	3534	3614	7147
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7151	23.69	NaN	4668.2	30	0	1488.6	0.106	+			14107	GSLKQFLKK	9	65	350.2221840917849	1047.6447228755549	3	350.22216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GSLKQFLKK_	ENSG00000115216|ENST00000379852|NRBP1;ENSG00000185189|ENST00000442628|NRBP2;ENST00000493746.1_1_2:27657358-27658741:+|nuORF;ENST00000493768.5_1_2:27657358-27657630:+|nuORF;ENST00000529747.5_1_8:144921838-144922003:-|nuORF;ENST00000533093.5_1_8:144921838-144923057:-|nuORF;nc|ENSG00000185189|Q9NSY0-5|NRBP2	42.396135135203025	0.392153681582562	3				NaN	NaN	0	NaN	3535	3614	7147
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7152	23.692	NaN	1072.1	30	0	183.77	0.106	+			34731	RWAHSQQRQDP	11	45	704.8454468014168	1407.6763406696334	2	704.8464965820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RWAHSQQRQDP_	ADAMTS14|p.G708Vfs*9|1|0.36|ENSG00000138316|chr10:70744126-70744126|G/-|frameshift_variant;ADAMTS14|p.H752Tfs*5|1|0.34|ENSG00000138316|chr10:70745292-70745292|C/-|frameshift_variant;ADAMTS14|p.L379*|1|0.38|ENSG00000138316|chr10:70732282-70732282|C/-|frameshift_variant;ENSG00000138316|ENST00000373207|ADAMTS14;nc|ENSG00000138316|Q8WXS8-2|ADAMTS14;nc|ENSG00000138316|Q8WXS8-3|ADAMTS14;nc|ENSG00000138316|Q8WXS8-4|ADAMTS14	23.52269567125451	0.7430573033454468	3				NaN	NaN	0	NaN	3536	3614	7147
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7153	23.693	NaN	2468.9	30	0	445.73	0.037	+			44712	TTLAFKPIKK	10	42	382.9131996641493	1145.717769592648	3	382.9132080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TTLAFKPIKK_	ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A	21.68575002086885	0.7027366847906487	3				NaN	NaN	0	NaN	3537	3614	7147
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7154	23.694	NaN	1513.7	30	0	162.52	0.139	+			50194	WLRAELEA	8	54	494.26466211999076	NaN	0	494.2650146484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_WLRAELEA_	ENSG00000137877|ENST00000320955|SPTBN5;SPTBN5|p.A3297Gfs*48|1|0.56|ENSG00000137877|chr15:41853672-41853673|-/C|frameshift_variant;SPTBN5|p.G2751Afs*60|1|0.08|ENSG00000137877|chr15:41857685-41857685|C/-|frameshift_variant	35.61828744233558	1.7418937515398478	3				NaN	NaN	0	NaN	3538	3614	7147
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7163	23.715	NaN	14983	30	0	1565.2	0.214	+			15526	GVDDKFYSK	9	80	529.7617021110274	1057.5088512888547	2	529.7614135742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVDDKFYSK_	ENSG00000105254|ENST00000221855|TBCB;ENST00000392178.8_1_19:36606435-36612715:+|nuORF;ENST00000481742.1_1_19:36606435-36607215:+|nuORF;ENST00000589308.1_1_19:36606815-36612715:+|nuORF;nc|ENSG00000105254|Q99426-2|TBCB	120.30596017624542	0.02101454110788768	3				NaN	NaN	0	NaN	3544	3617	7162
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7164	23.719	NaN	4330.8	30	0	576.21	0.106	+			42949	TEISTKEV	8	62	453.74232051525297	NaN	0	453.74237060546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEISTKEV_	ENSG00000079819|ENST00000337057|EPB41L2;ENST00000452150.6_1_6:131179278-131188835:-|nuORF;nc|ENSG00000079819|O43491-3|EPB41L2;nc|ENSG00000079819|O43491-4|EPB41L2	71.87747018426188	1.7418937515398478	3				NaN	NaN	0	NaN	3545	3617	7162
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7165	23.721	NaN	3960	30	0	725.93	0.106	+			51589	YYNVWLRAQ	9	48	404.8772808484258	1211.6100131454775	3	404.87689208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YYNVWLRAQ_	ENSG00000145860|ENST00000424310|RNF145;ENST00000518062.1_1_5:158588183-158590023:-|nuORF;nc|ENSG00000145860|Q96MT1-2|RNF145;nc|ENSG00000145860|Q96MT1-3|RNF145;nc|ENSG00000145860|Q96MT1-4|RNF145;nc|ENSG00000145860|Q96MT1-5|RNF145;RNF145|p.T570Sfs*23|1|0.07|ENSG00000145860|chr5:159158953-159158954|-/AGCATAC|frameshift_variant	20.94693142431847	0.6074874384046576	3				NaN	NaN	0	NaN	3546	3617	7162
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7166	23.723	NaN	2109	30	0	325.99	0.106	+			40330	STTAILQQK	9	65	495.2846743432249	NaN	0	495.2841796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STTAILQQK_	ENSG00000196449|ENST00000373044|YRDC	52.936696900407355	0.1864545979552969	3				NaN	NaN	0	NaN	3547	3617	7162
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7167	23.725	NaN	2732.1	30	0	165.34	0.106	+			13854	GQWKEEQKL	9	62	573.3014392381034	1144.5883255430067	2	573.30078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GQWKEEQKL_	ENSG00000157020|ENST00000350697|SEC13;ENST00000477547.6_1_3:10345637-10359739:-|nuORF;ENST00000479868.6_1_3:10342947-10354476:-|nuORF;nc|ENSG00000157020|P55735-2|SEC13;nc|ENSG00000157020|P55735-3|SEC13;nc|ENSG00000157020|P55735-4|SEC13	72.87924865735499	0.12833875048249987	3				NaN	NaN	0	NaN	3548	3617	7162
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7168	23.726	NaN	3001.2	30	0	368.05	0.034	+			21259	KLLLNHTN	8	67	476.782811038661	951.551069144122	2	476.782470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KLLLNHTN_	ENSG00000165555|ENST00000380835|NOXRED1;nc|ENSG00000165555|Q6NXP6-2|NOXRED1	55.50420428727701	0.5462892107279674	3				NaN	NaN	0	NaN	3549	3617	7162
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7169	23.727	NaN	1684.5	30	0	603	0.138	+			28665	NLRGHVPA	8	41	432.2454760411991	862.4763991491982	2	432.2449951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NLRGHVPA_	ENSG00000173261|ENST00000311450|PLAC8L1	15.63621529709179	0.7929342111279789	3				NaN	NaN	0	NaN	3550	3617	7162
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7179	23.751	NaN	12251	30	0	2689.7	0.215	+			14868	GTLNQPLTK	9	71	486.27979361667013	970.5450343001403	2	486.2794189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTLNQPLTK_	ENSG00000103671|ENST00000261884|TRIP4	117.5257442709337	0.022697614825424036	3				NaN	NaN	0	NaN	3557	3620	7178
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7180	23.754	NaN	4431.9	30	0	541.2	0.106			+	1063	AEKSTEEKGSG	11	68	561.767434837016	1121.520316740832	2	561.7680053710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEKSTEEKGSG_	REV__ENSG00000150681|ENST00000367460|RGS18;REV__ENST00000481707.5_1_1:192127767-192130605:+|nuORF	42.33807565288922	0.5259510355945483	3				NaN	NaN	0	NaN	3558	3620	7178
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7181	23.756	NaN	2344.2	30	0	278.19	0.106	+			47846	VSLDLKSKE	9	57	509.79274931524094	1017.5709456972819	2	509.7926330566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSLDLKSKE_	ENST00000325042.2_1_7:22765745-22766153:-|nuORF	54.776311868738084	0.25715957988447635	3				NaN	NaN	0	NaN	3559	3620	7178
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7182	23.758	NaN	4145.9	30	0	466.92	0.106	+			41191	SVLDKSLTK	9	64	495.79550724794666	989.5764615626933	2	495.79437255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVLDKSLTK_	ENSG00000198265|ENST00000358691|HELZ;ENST00000578938.1_1_17:65172688-65184471:-|nuORF;HELZ|p.L1089Ffs*20|1|0.05|ENSG00000198265|chr17:67128771-67128772|-/GTTAATG|frameshift_variant;nc|ENSG00000198265|P42694-2|HELZ	65.46538089061403	0.16805504838372562	3				NaN	NaN	0	NaN	3560	3620	7178
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7183	23.76	NaN	1346.9	30	0	336.23	0.106			+	13594	GLVLVTPAHT	10	30	336.5344587012951	1006.5815467040852	3	336.53424072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GLVLVTPAHT_	REV__ALG12|p.A295V|1|0.16|ENSG00000182858|chr22:49907829-49907829|G/A|missense_variant	16.473147378115264	0.7327422906225664	3				NaN	NaN	0	NaN	3561	3620	7178
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7184	23.761	NaN	1600.3	30	0	395.38	0.037	+			50542	YARSVHEEF	9	53	569.2696504743409	NaN	0	569.269287109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YARSVHEEF_	ENSG00000078808|ENST00000360001|SDF4;ENST00000465727.5_1_1:1152894-1153089:-|nuORF;ENST00000478938.1_1_1:1152894-1154464:-|nuORF;ENST00000494748.1_1_1:1152894-1154464:-|nuORF;nc|ENSG00000078808|Q9BRK5-2|SDF4;nc|ENSG00000078808|Q9BRK5-5|SDF4;nc|ENSG00000078808|Q9BRK5|SDF4	49.536043120802724	0.20989033510253738	3				NaN	NaN	0	NaN	3562	3620	7178
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7185	23.762	NaN	1312.6	30	0	368.22	0.141				-1	SEQMEIAIR	9	47	546.771062145827	1091.527571358454	2	546.7719116210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_SEQM(Oxidation (M))EIAIR_	ENSG00000112159|ENST00000369393|MDN1;MDN1|p.L5278Ffs*6|1|0.18|ENSG00000112159|chr6:89652273-89652274|-/A|frameshift_variant	35.61828744233558	0.47037581924408073	3				NaN	NaN	0	NaN	3563	3620	7178
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7190	23.778	NaN	4495.8	30	0	944.14	0.214	+			37082	SISGPISTSK	10	70	488.76932248988896	975.524092046578	2	488.7689514160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SISGPISTSK_	ENSG00000100014|ENST00000314328|SPECC1L;nc|ENSG00000100014|Q69YQ0-2|SPECC1L	53.08895987439943	0.42869529153390606	3				NaN	NaN	0	NaN	3565	3623	7189
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7191	23.781	NaN	3042.5	30	0	568.79	0.106				-1	 	0	55	436.24769637678935	435.24041991018936	1	436.2476501464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3566	3623	7189
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7192	23.783	NaN	2173.1	30	0	314.77	0.106	+			8867	EERNQTQVL	9	54	558.7861431339559	NaN	0	558.7864379882812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EERNQTQVL_	ENSG00000113194|ENST00000261942|FAF2	71.87747018426188	0.0992163553043454	3				NaN	NaN	0	NaN	3567	3623	7189
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7193	23.785	NaN	2782.3	30	0	454.36	0.106	+			51399	YTNGPLPDK	9	62	502.7560693519253	1003.4975857706506	2	502.7561950683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YTNGPLPDK_	ENSG00000142789|ENST00000290122|CELA3A;ENSG00000219073|ENST00000337107|CELA3B	45.02220120713402	0.3613509778819777	3				NaN	NaN	0	NaN	3568	3623	7189
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7194	23.787	NaN	1902.8	30	0	278.95	0.106	+			4631	ATLPNQPVEK	10	49	548.8036507397354	1095.5927485462707	2	548.8038940429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATLPNQPVEK_	ENSG00000140525|ENST00000310775|FANCI;nc|ENSG00000140525|Q9NVI1-1|FANCI;nc|ENSG00000140525|Q9NVI1-2|FANCI	63.42647028704847	0.33467688528802414	3				NaN	NaN	0	NaN	3569	3623	7189
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7195	23.789	NaN	1219.5	30	0	138.27	0.106			+	-1	TNDKGGKKQL	10	50	565.8129343640327	1129.6113157948653	2	565.8129272460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))TNDKGGKKQL_	REV__DMGDH|p.K865N|1|0.2|ENSG00000132837|chr5:78998088-78998088|T/G|missense_variant	46.45678178249821	0.4896490706773647	3				NaN	NaN	0	NaN	3570	3623	7189
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7196	23.791	NaN	1627.9	30	0	240.48	0.036	+			35047	SAEEGYRTY	9	62	538.2393368329301	1074.4641207326601	2	538.2388916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SAEEGYRTY_	ENSG00000110455|ENST00000263776|ACCS;ENST00000526577.5_1_11:44088110-44095068:+|nuORF;nc|ENSG00000110455|Q96QU6-2|ACCS	45.02220120713402	0.3613509778819777	3				NaN	NaN	0	NaN	3571	3623	7189
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7205	23.81	NaN	6410.8	30	0	719.28	0.214			+	22823	KVGAHIIQ	8	65	433.2663920323089	864.5182311314178	2	433.26611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVGAHIIQ_	REV__ENSG00000147789|ENST00000532777|ZNF7;REV__nc|ENSG00000147789|P17097-2|ZNF7	60.29395666154354	0.49887135096048313	3				NaN	NaN	0	NaN	3577	3626	7204
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7206	23.814	NaN	19018	30	0	10462	0.106	+			12719	GEKTEQKNWKL	11	73	454.24570463736796	1359.715284512304	3	454.2453918457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEKTEQKNWKL_	L1PA3_dup1321|chr2:173527290-173533317:-|1.892281258594111|0.2637255971055219|2.84|482.0|75|2|sense	19.1035232394073	0.7810393085260824	3				NaN	NaN	0	NaN	3578	3626	7204
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7207	23.816	NaN	2715	30	0	560.19	0.106			+	11352	FLGCPKMAG	9	57	462.22728164508663	922.4400103569733	2	462.22705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FLGCPKMAG_	REV__ENST00000495739.1_1_3:21478408-21552461:-|nuORF	40.5726180659479	0.4135428067754104	3				NaN	NaN	0	NaN	3579	3626	7204
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7208	23.818	NaN	2983.4	30	0	412.54	0.106	+			43959	TPEEKIREY	9	67	582.7987573620084	1163.5829617908166	2	582.7984008789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TPEEKIREY_	ENSG00000138668|ENST00000313899|HNRNPD;ENST00000514325.1_1_4:83279715-83279970:-|nuORF;nc|ENSG00000138668|Q14103-2|HNRNPD;nc|ENSG00000138668|Q14103-3|HNRNPD;nc|ENSG00000138668|Q14103-4|HNRNPD	46.45678178249821	0.34452392205506005	3				NaN	NaN	0	NaN	3580	3626	7204
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7209	23.82	NaN	3495.1	30	0	639.9	0.106	+			4919	ATQLLKLAHK	10	41	374.9049404428409	1121.6929919287227	3	374.9044189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATQLLKLAHK_	ENSG00000148303|ENST00000323345|RPL7A;ENST00000424559.2_1_22:19780074-19780431:+|nuORF;ENST00000434317.1_1_7:102395625-102396051:+|nuORF;ENST00000437848.1_1_1:46117146-46117242:-|nuORF;ENST00000463740.5_1_9:136215098-136217195:+|nuORF;ENST00000468834.1_1_10:33346560-33347304:-|nuORF;ENST00000473054.1_1_14:68805457-68806021:-|nuORF;ENST00000485706.5_1_9:136216467-136216912:+|nuORF;ENST00000486157.1_1_5:78825151-78825526:+|nuORF	25.125986553469783	0.6746423231557295	3				NaN	NaN	0	NaN	3581	3626	7204
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7210	23.821	NaN	1567.2	30	0	281.87	0.106	+			20055	KEKEFEETM	9	58	585.7716822204302	1169.5288115076603	2	585.7711791992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KEKEFEETM_	ENSG00000204843|ENST00000628224|DCTN1;nc|ENSG00000204843|Q14203-2|DCTN1;nc|ENSG00000204843|Q14203-3|DCTN1;nc|ENSG00000204843|Q14203-4|DCTN1;nc|ENSG00000204843|Q14203-5|DCTN1;nc|ENSG00000204843|Q14203-6|DCTN1	70.8162118820467	0.13725933411854815	3				NaN	NaN	0	NaN	3582	3626	7204
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7211	23.823	NaN	1813.1	30	0	192.01	0.032	+			11745	FSGTVRGA	8	47	397.7110249094154	NaN	0	397.7110595703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FSGTVRGA_	nc|ENSG00000166343|Q4VC12-2|MSS51;nc|ENSG00000166343|Q4VC12-3|MSS51	42.396135135203025	1.7418937515398478	3				NaN	NaN	0	NaN	3583	3626	7204
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7216	23.837	NaN	5698.6	30	0	1113.9	0.214	+			7199	DAHVDSTTY	9	63	504.71730216152304	1007.4200513898461	2	504.7167663574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DAHVDSTTY_	ENSG00000109320|ENST00000226574|NFKB1;nc|ENSG00000109320|P19838-3|NFKB1;nc|ENSG00000109320|P19838|NFKB1;NFKB1|p.I888Sfs*8|1|0.09|ENSG00000109320|chr4:102613497-102613497|A/-|frameshift_variant	79.45101966838831	0.09992237243120712	3				NaN	NaN	0	NaN	3585	3629	7215
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7217	23.841	NaN	4413.4	30	0	1124.5	0.106	+			22075	KSLELPHF	8	65	485.76896026391495	NaN	0	485.76885986328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KSLELPHF_	ENST00000308377.8_1_17:33679129-33679345:-|nuORF	51.33545320467046	1.7418937515398478	3				NaN	NaN	0	NaN	3586	3629	7215
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7218	23.843	NaN	3431.7	30	0	658.31	0.106	+			48291	VTDVAGHL	8	47	406.219296516909	810.4240401006181	2	406.71649169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTDVAGHL_	ENSG00000171017|ENST00000306708|LRRC8E	29.841539824830324	0.7289191502596711	3				NaN	NaN	0	NaN	3587	3629	7215
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7219	23.844	NaN	2631.6	30	0	194.8	0.106	+			3623	ASVVAIDNK	9	59	458.7587587071441	915.5029644810883	2	458.7582702636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASVVAIDNK_	ENSG00000102804|ENST00000458659|TSC22D1;ENSG00000157514|ENST00000372383|TSC22D3;ENST00000487881.2_1_13:45010128-45010713:-|nuORF;nc|ENSG00000102804|Q15714-2|TSC22D1;nc|ENSG00000102804|Q15714-3|TSC22D1;nc|ENSG00000157514|Q99576|TSC22D3	85.86182877749512	0.07653218437724067	3				NaN	NaN	0	NaN	3588	3629	7215
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7220	23.846	NaN	3225.7	30	0	1250.6	0.106			+	35203	SAKEGILLNIG	11	39	372.22069443267	1113.64025389821	3	372.2203369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SAKEGILLNIG_	REV__tr|U7T6X9|U7T6X9_FUSNUDNArepairproteinRecNOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00046PE=3SV=1	21.780426970141523	0.7613322811393133	3				NaN	NaN	0	NaN	3589	3629	7215
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7221	23.848	NaN	1146	30	0	194.05	0.106	+			25006	LLFYDLFLM	9	36	392.2120361328125	NaN	0	392.2120361328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LLFYDLFLM_	ENST00000419819.2_3_7:80275924-80276026:+|nuORF	34.172542307311794	0.30503706118289736	3				NaN	NaN	0	NaN	3590	3629	7215
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7222	23.85	NaN	1973.1	30	0	121.38	0.036			+	38354	SRNQLDRAQ	9	62	544.2822502714374	1086.5499476096747	2	544.2821044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SRNQLDRAQ_	REV__ENSG00000168040|ENST00000301838|FADD	58.22992032128504	0.22837015374068087	3				NaN	NaN	0	NaN	3591	3629	7215
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7227	23.864	NaN	6790.3	30	0	1517.8	0.214	+			36089	SEKEKQIVL	9	74	537.3144111331668	1072.6142693331335	2	537.3140869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEKEKQIVL_	ENSG00000167861|ENST00000425042|HID1;HID1|p.L141Wfs*62|1|0.54|ENSG00000167861|chr17:74963048-74963048|G/-|frameshift_variant;HID1|p.P773Lfs*8|1|0.17|ENSG00000167861|chr17:74951619-74951619|G/-|frameshift_variant;nc|ENSG00000167861|Q8IV36-2|HID1	65.2775769800794	0.16962058972581526	3				NaN	NaN	0	NaN	3593	3632	7226
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7228	23.868	NaN	5236.3	30	0	487.35	0.106	+			12423	GEAQVGKTSL	10	72	495.2669906213815	988.5194283095631	2	495.26617431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEAQVGKTSL_	ENSG00000140983|ENST00000315082|RHOT2;ENST00000562598.5_1_16:718199-720176:+|nuORF;ENST00000562708.5_1_16:718199-718465:+|nuORF;ENST00000567017.5_1_16:718199-721765:+|nuORF;ENST00000568950.5_1_16:718199-721765:+|nuORF;ENST00000569675.5_1_16:718199-718652:+|nuORF	90.14881205920913	0.1302219035121668	3				NaN	NaN	0	NaN	3594	3632	7226
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7229	23.87	NaN	2147.3	30	0	294.85	0.106			+	47980	VSPHAGSSL	9	48	427.7220623707921	853.4295718083843	2	427.72186279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSPHAGSSL_	REV__ENST00000528300.5_1_14:50459574-50472442:-|nuORF	55.50420428727701	0.2510918378945873	3				NaN	NaN	0	NaN	3595	3632	7226
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7230	23.871	NaN	2596.8	30	0	1140.8	0.106			+	26564	LTSSRGFVGT	10	49	512.7744703396603	1023.5343877461206	2	512.7744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LTSSRGFVGT_	REV__ENSG00000188050|ENST00000340112|RNF133;REV__RNF133|p.F278Sfs*43|1|0.17|ENSG00000188050|chr7:122698086-122698086|A/-|frameshift_variant	48.601550744091256	0.46988609897316763	3				NaN	NaN	0	NaN	3596	3632	7226
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7231	23.873	NaN	2105.2	30	0	303.17	0.106			+	46634	VGATVPIHQKL	11	45	388.23683454528214	1161.6886742360464	3	388.236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VGATVPIHQKL_	REV__ENST00000287218.8_1_6:38120424-38120514:+|nuORF	35.17822180527639	0.6208003396870814	3				NaN	NaN	0	NaN	3597	3632	7226
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7232	23.875	NaN	2350	30	0	203.8	0.036			+	-1	SSKRCLSDL	9	60	533.2705068273665	1064.5264607215329	2	533.270263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_SSKRC(Carbamidomethyl (C))LSDL_	REV__ENST00000594511.1_1_19:44079032-44079578:-|nuORF	36.446750945000026	0.4619375763483977	3				NaN	NaN	0	NaN	3598	3632	7226
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7236	23.889	NaN	2141.4	30	0	243.88	0.214	+			10390	EVDPDTKEM	9	59	532.2347224152701	1062.45489189734	2	532.2346801757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EVDPDTKEM_	ENSG00000182774|ENST00000647841|RPS17;ENST00000396783.2_1_6:29457050-29457287:-|nuORF;ENST00000423610.1_1_22:32435574-32435880:+|nuORF;ENST00000461663.1_1_5:116052154-116052343:+|nuORF;ENST00000561068.5_3_15:83205554-83208094:-|nuORF	85.16082228582465	0.07850854922700509	3				NaN	NaN	0	NaN	3599	3635	7235
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7237	23.893	NaN	3597.2	30	0	297.1	0.106	+			14709	GTIIVSGSTEK	11	67	546.3001803354084	1090.5858077376167	2	546.3012084960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTIIVSGSTEK_	ENSG00000114742|ENST00000302313|WDR48;nc|ENSG00000114742|Q8TAF3-3|WDR48;nc|ENSG00000114742|Q8TAF3-4|WDR48	117.7056744995986	0.02459125945945966	3				NaN	NaN	0	NaN	3600	3635	7235
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7238	23.894	NaN	3174	30	0	387.55	0.106			+	37256	SLAADKPQL	9	66	471.7665264990114	941.5185000648228	2	471.7658996582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLAADKPQL_	REV__ENSG00000129422|ENST00000693296|MTUS1;REV__ENST00000523718.5_1_8:17581004-17613316:-|nuORF;REV__MTUS1|p.A567Qfs*4|1|0.2|ENSG00000129422|chr8:17754110-17754110|T/-|frameshift_variant;REV__nc|ENSG00000129422|Q9ULD2-2|MTUS1;REV__nc|ENSG00000129422|Q9ULD2-5|MTUS1	67.49366992349736	0.1516260258713357	3				NaN	NaN	0	NaN	3601	3635	7235
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7239	23.896	NaN	4905.1	30	0	2424.4	0.106	+			12478	GEDRVVAAL	9	56	465.2563015032084	928.4980500732169	2	465.2559814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEDRVVAAL_	ENST00000556990.1_1_14:39736294-39748673:+|nuORF	40.5726180659479	0.4135428067754104	3				NaN	NaN	0	NaN	3602	3635	7235
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7240	23.898	NaN	1535.6	30	0	179.03	0.106	+			18599	ISRITMSAP	9	53	488.26710473893206	NaN	0	488.2667236328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ISRITMSAP_	ENSG00000156398|ENST00000369893|SFXN2;SFXN2|p.P265Sfs*27|1|0.05|ENSG00000156398|chr10:102733574-102733575|-/T|frameshift_variant	61.691277971877994	0.14210560126578747	3				NaN	NaN	0	NaN	3603	3635	7235
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7241	23.9	NaN	1901.4	30	0	201.31	0.106			+	38319	SRENQAPFE	9	59	539.2522243067268	1076.4898956802535	2	539.2521362304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SRENQAPFE_	REV__ENST00000396522.6_1_14:21967741-21972178:-|nuORF	34.172542307311794	0.4838870758800184	3				NaN	NaN	0	NaN	3604	3635	7235
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7242	23.902	NaN	1400.9	30	0	129.31	0.035	+			45293	TVRSSPAPSE	10	56	515.7618740876258	NaN	0	515.761474609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TVRSSPAPSE_	ENSG00000095951|ENST00000379388|HIVEP1;HIVEP1|p.I2404Sfs*57|1|0.23|ENSG00000095951|chr6:12163508-12163508|G/-|frameshift_variant	37.81151784470057	0.3760215235790741	3				NaN	NaN	0	NaN	3605	3635	7235
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7248	23.916	NaN	6441.8	30	0	1493.2	0.215	+			13186	GIAGSLTNK	9	55	430.74556756547287	859.4765821977458	2	430.74530029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GIAGSLTNK_	ENSG00000175445|ENST00000650287|LPL	107.00750918261382	0.032051501805654005	3				NaN	NaN	0	NaN	3608	3638	7247
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7249	23.92	NaN	2233.3	30	0	398.72	0.106	+			28740	NNTSIKGF	8	52	440.73012049438535	879.4456880555707	2	440.7299499511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NNTSIKGF_	ENSG00000035928|ENST00000349703|RFC1;nc|ENSG00000035928|P35251|RFC1	35.61828744233558	0.6843154725607303	3				NaN	NaN	0	NaN	3609	3638	7247
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7250	23.922	NaN	1546.7	30	0	241.41	0.106			+	34161	RTAQSQLSQS	10	59	553.2825983144274	1104.5506436956548	2	553.2838745117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RTAQSQLSQS_	REV__ENST00000555759.1_1_14:95904955-95916441:-|nuORF	24.519189625965996	0.6795976720565101	3				NaN	NaN	0	NaN	3610	3638	7247
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7251	23.924	NaN	1783.5	30	0	348.56	0.106	+			24035	LEFKDSKKI	9	50	369.88550070988987	1106.6346727298696	3	369.885009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LEFKDSKKI_	tr|U7SYG8|U7SYG8_FUSNUDNAtopoisomeraseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00874PE=3SV=1	35.15202426646627	0.4747332964206883	3				NaN	NaN	0	NaN	3611	3638	7247
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7252	23.925	NaN	1313.4	30	0	133.01	0.106			+	24641	LGSVAPLFL	9	52	458.7762659491827	NaN	0	458.77685546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LGSVAPLFL_	REV__ACAD11|p.W537Mfs*57|1|0.25|ENSG00000240303|chr3:132603241-132603242|-/T|frameshift_variant;REV__ENSG00000240303|ENST00000264990|ACAD11;REV__ENST00000469042.5_1_3:132298334-132378619:-|nuORF;REV__nc|ENSG00000240303|Q709F0-2|ACAD11;REV__nc|ENSG00000240303|Q709F0-3|ACAD11	44.53106598305862	0.24438232876904814	3				NaN	NaN	0	NaN	3612	3638	7247
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7253	23.927	NaN	1153.4	30	0	592.56	0.106				-1	 	0	27	322.1939205145492	642.3732880958984	2	322.19384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3613	3638	7247
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7254	23.929	NaN	842.98	30	0	39.31	0.037			+	11210	FIALIGKGTIH	11	57	585.3539249959497	1168.6932970586993	2	585.354248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FIALIGKGTIH_	REV__ENSG00000163431|ENST00000367288|LMOD1;REV__nc|ENSG00000163431|P29536-2|LMOD1	29.170058357718403	0.683821074385409	3				NaN	NaN	0	NaN	3614	3638	7247
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7263	23.949	NaN	5448.5	30	0	1470.7	0.214	+			6533	AYGASKTF	8	58	422.7140174367592	843.4134819403184	2	422.7134704589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AYGASKTF_	ENSG00000132383|ENST00000254719|RPA1;RPA1|p.N274Mfs*5|1|0.18|ENSG00000132383|chr17:1879272-1879272|A/-|frameshift_variant	98.62937762414208	0.25143494708580966	3				NaN	NaN	0	NaN	3620	3641	7262
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7264	23.952	NaN	20231	30	0	11516	0.106				-1	 	0	58	349.8783646706454	1046.6132646121362	3	349.8780212402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3621	3641	7262
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7265	23.954	NaN	2047	30	0	216.47	0.033	+			29071	NTKEIQAV	8	58	451.75087527633735	901.4871976194747	2	451.7503356933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NTKEIQAV_	ENSG00000171804|ENST00000447313|WDR87;nc|ENSG00000171804|Q6ZQQ6-2|WDR87;WDR87|p.A2794Pfs*4|1|0.26|ENSG00000171804|chr19:37885175-37885175|T/-|frameshift_variant;WDR87|p.K2720Rfs*57|5|0.35|ENSG00000171804|chr19:37885395-37885395|T/-|frameshift_variant;WDR87|p.Q1927Tfs*32|1|0.44|ENSG00000171804|chr19:37887775-37887776|-/T|frameshift_variant;WDR87|p.R2063Gfs*11|1|0.12|ENSG00000171804|chr19:37887367-37887367|T/-|frameshift_variant;WDR87|p.R2063Kfs*25|1|0.32|ENSG00000171804|chr19:37887366-37887367|-/T|frameshift_variant	60.11826168202944	0.5006107059937851	3				NaN	NaN	0	NaN	3622	3641	7262
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7273	23.972	NaN	3806.3	30	0	1005.2	0.214			+	26105	LSNPVPAN	8	46	406.219296516909	810.4240401006181	2	406.21905517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSNPVPAN_	REV__ENSG00000117000|ENST00000372771|RLF;REV__RLF|p.H728Tfs*20|1|0.42|ENSG00000117000|chr1:40236880-40236880|T/-|frameshift_variant;REV__RLF|p.K1151Sfs*12|1|0.41|ENSG00000117000|chr1:40238150-40238150|A/-|frameshift_variant;REV__RLF|p.N1741Ifs*21|1|0.18|ENSG00000117000|chr1:40239919-40239919|A/-|frameshift_variant;REV__RLF|p.V1739Kfs*12|1|0.09|ENSG00000117000|chr1:40239916-40239917|TG/-|frameshift_variant;REV__RLF|p.Y1419Ifs*6|1|0.31|ENSG00000117000|chr1:40238952-40238952|T/-|frameshift_variant	60.29395666154354	0.49887135096048313	3				NaN	NaN	0	NaN	3627	3644	7272
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7274	23.976	NaN	2472	30	0	346.41	0.106	+			33205	RFEAAAIQHL	10	48	385.88085021803477	1154.6207212543043	3	385.88043212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RFEAAAIQHL_	ENSG00000274588|ENST00000611977|DGKK	50.033510581677724	0.4566913063131936	3				NaN	NaN	0	NaN	3628	3644	7272
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7275	23.978	NaN	2760.3	30	0	217.28	0.106			+	24073	LEKDCAALA	9	66	495.74968691208954	NaN	0	495.75048828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LEKDC(Carbamidomethyl (C))AALA_	REV__CEP350|p.W1900C|1|0.34|ENSG00000135837|chr1:180075154-180075154|G/T|missense_variant	87.69643885390035	0.04624013146650493	3				NaN	NaN	0	NaN	3629	3644	7272
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7276	23.98	NaN	3506.9	30	0	376.74	0.106	+			10821	FANGRSTGL	9	60	461.74075089516083	921.4669488571217	2	461.74072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FANGRSTGL_	ENSG00000077080|ENST00000160382|ACTL6B;ENSG00000136518|ENST00000429709|ACTL6A;nc|ENSG00000136518|O96019-2|ACTL6A	71.87747018426188	0.13267044672804276	3				NaN	NaN	0	NaN	3630	3644	7272
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7277	23.982	NaN	2953.2	30	0	386.41	0.106	+			12039	FYLPNILK	8	62	504.2979773438588	NaN	0	504.2981262207031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FYLPNILK_	ENST00000375110.6_1_10:32594803-32667680:-|nuORF	37.15910966729921	1.7418937515398478	3				NaN	NaN	0	NaN	3631	3644	7272
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7278	23.983	NaN	3979.4	30	0	390.51	0.106	+			31715	QNSGLLGKLE	10	75	529.7956983195791	1057.576843705958	2	529.7928466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QNSGLLGKLE_	KNDC1|p.R1337Q|1|0.29|ENSG00000171798|chr10:133211523-133211523|G/A|missense_variant	58.2462437865262	0.38179041844353556	3				NaN	NaN	0	NaN	3632	3644	7272
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7279	23.985	NaN	957.11	30	0	74.992	0.039				-1	LTEKEMIQKL	10	43	416.90013810037823	NaN	0	416.9001770019531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_LTEKEM(Oxidation (M))IQKL_	CCDC146|p.F933Lfs*10|1|0.43|ENSG00000135205|chr7:77294794-77294794|T/-|frameshift_variant;ENSG00000135205|ENST00000285871|CCDC146;ENST00000464021.1_1_7:76911943-76916258:+|nuORF;nc|ENSG00000135205|Q8IYE0-2|CCDC146	32.75053402867276	0.3926392905881664	3				NaN	NaN	0	NaN	3633	3644	7272
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7285	24.001	NaN	3683.4	30	0	411.25	0.214	+			36542	SFIPKAGK	8	58	424.25578174412766	846.4970105550553	2	424.2552490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SFIPKAGK_	nc|ENSG00000183378|Q7RTZ1|OVCH2	55.50420428727701	0.5462892107279674	3				NaN	NaN	0	NaN	3636	3647	7284
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7286	24.005	NaN	6122	30	0	718.96	0.106	+			35778	SEAEAAKNAL	10	73	502.2567522279784	1002.4989515227568	2	502.2562255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEAEAAKNAL_	ENSG00000157110|ENST00000397323|RBPMS;nc|ENSG00000157110|Q93062-2|RBPMS;nc|ENSG00000157110|Q93062-3|RBPMS;nc|ENSG00000157110|Q93062-4|RBPMS;nc|ENSG00000157110|Q93062-5|RBPMS	112.10723106719422	0.0417416748461292	3				NaN	NaN	0	NaN	3637	3647	7284
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7287	24.007	NaN	3806.8	30	0	712.44	0.106				-1	CRLSPPTRPL	10	33	399.55747801477656	1195.6506046445297	3	399.55712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_C(Carbamidomethyl (C))RLSPPTRPL_	ENST00000369857.8_1_10:104860573-104871503:-|nuORF	28.081489160057373	0.6505064946289502	3				NaN	NaN	0	NaN	3638	3647	7284
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7288	24.009	NaN	1518.4	30	0	257.79	0.106	+			30589	QAPSYGARPV	10	54	523.2742466769944	NaN	0	523.2760009765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QAPSYGARPV_	ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53342924-53344195:+|nuORF	42.86426827375447	0.3507156137006061	3				NaN	NaN	0	NaN	3639	3647	7284
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7289	24.01	NaN	4554.4	30	0	1611.4	0.106				-1	 	0	34	334.2016294612325	999.5830589838977	3	334.2013854980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3640	3647	7284
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7290	24.012	NaN	3674.2	30	0	1587.3	0.106				-1	VSGGTRSMLVL	11	42	379.2090269783419	1134.6052515352258	3	379.20806884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_VSGGTRSM(Oxidation (M))LVL_	ENST00000256496.7_1_3:5220967-5221039:+|nuORF	18.531049691330335	0.7837198200183355	3				NaN	NaN	0	NaN	3641	3647	7284
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7291	24.014	NaN	806.13	30	0	103.78	0.034				-1	HVKTGCET	8	41	487.22344923814103	NaN	0	487.2235107421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))HVKTGC(Carbamidomethyl (C))ET_	ENSG00000164828|ENST00000401592|SUN1;ENST00000413171.6_1_7:892397-912965:+|nuORF;ENST00000475971.5_1_7:893033-912965:+|nuORF;nc|ENSG00000164828|O94901-5|SUN1;nc|ENSG00000164828|O94901-6|SUN1;nc|ENSG00000164828|O94901-9|SUN1;SUN1|p.A504V|1|0.21|ENSG00000164828|chr7:857944-857944|C/T|missense_variant;SUN1|p.E739Gfs*27|1|0.41|ENSG00000164828|chr7:872532-872533|-/G|frameshift_variant	18.324413293986947	1.7418937515398478	3				NaN	NaN	0	NaN	3642	3647	7284
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7299	24.034	NaN	13678	30	0	8283.1	0.214	+			14638	GTGTIIVAK	9	65	430.26623595574165	858.5179189782833	2	430.2658996582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTGTIIVAK_	ENSG00000083857|ENST00000441802|FAT1;FAT1|p.G2934Vfs*3|2|0.37|ENSG00000083857|chr4:186617787-186617787|T/-|frameshift_variant;FAT1|p.N3847Yfs*7|1|0.03|ENSG00000083857|chr4:186601370-186601371|-/TTATA|frameshift_variant;FAT1|p.P3228Lfs*42|1|0.27|ENSG00000083857|chr4:186611556-186611556|G/-|frameshift_variant;FAT1|p.P4313Lfs*36|1|0.34|ENSG00000083857|chr4:186596602-186596602|G/-|frameshift_variant;FAT1|p.Q2933Hfs*14|1|0.33|ENSG00000083857|chr4:186617787-186617788|-/G|frameshift_variant;FAT1|p.V1878Cfs*8|2|0.22|ENSG00000083857|chr4:186620955-186620956|-/G|frameshift_variant	113.41158876095287	0.025516849225023126	3				NaN	NaN	0	NaN	3647	3650	7298
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7300	24.037	NaN	5304.6	30	0	817.12	0.106	+			38248	SQNDGSFISK	10	78	541.7596864377003	1081.5048199422006	2	541.7598266601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SQNDGSFISK_	ENSG00000110400|ENST00000264025|NECTIN1	53.59686742100583	0.4240759338601513	3				NaN	NaN	0	NaN	3648	3650	7298
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7301	24.039	NaN	9108.7	30	0	1662.7	0.106	+			44379	TSLDKFYRK	9	74	386.5490943530702	1156.6254536594106	3	386.54852294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TSLDKFYRK_	ENSG00000034152|ENST00000342679|MAP2K3;MAP2K3|p.Q288Sfs*19|1|0.24|ENSG00000034152|chr17:21312224-21312224|C/-|frameshift_variant;nc|ENSG00000034152|P46734-2|MAP2K3;nc|ENSG00000034152|P46734-3|MAP2K3	27.882242232435846	0.5426732730940306	3				NaN	NaN	0	NaN	3649	3650	7298
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7302	24.041	NaN	14451	30	0	2927.7	0.106	+			5453	ATYSVGMQK	9	70	492.74481846670216	983.4750840002043	2	492.7444763183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATYSVGMQK_	ENSG00000131941|ENST00000254260|RHPN2;ENST00000592247.1_1_19:33470904-33481620:-|nuORF;nc|ENSG00000131941|Q8IUC4-2|RHPN2;nc|ENSG00000258628|A8MT19|RHPN2P1	154.1183686248401	0.005909203230691971	3				NaN	NaN	0	NaN	3650	3650	7298
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7303	24.043	NaN	4332.4	30	0	778.53	0.106	+			17584	IEDKKQELL	9	64	372.5486708141353	1114.6241830426059	3	372.5482482910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IEDKKQELL_	ENSG00000122483|ENST00000690025|CCDC18;nc|ENSG00000122483|Q5T9S5-2|CCDC18;nc|ENSG00000122483|Q5T9S5|CCDC18	42.396135135203025	0.392153681582562	3				NaN	NaN	0	NaN	3651	3650	7298
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7304	24.045	NaN	15688	30	0	4219.3	0.038	+			10672	EYSKQMQRF	9	77	608.7928855987612	1215.5712182643224	2	608.7927856445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EYSKQMQRF_	ENSG00000116478|ENST00000373548|HDAC1;ENSG00000196591|ENST00000519065|HDAC2;ENST00000463172.5_1_1:32757770-32792715:+|nuORF;ENST00000481281.5_1_1:32757770-32793222:+|nuORF;nc|ENSG00000196591|Q92769-3|HDAC2	148.98678547993487	0.0071052929883181565	3				NaN	NaN	0	NaN	3652	3650	7298
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7305	24.045	NaN	5462.9	30	0	702.87	0.142				-1	YSYCNKDVP	9	71	573.2518455863743	1144.4891382395485	2	573.2520141601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_YSYC(Carbamidomethyl (C))NKDVP_	ENSG00000072121|ENST00000347230|ZFYVE26;ENST00000394455.6_1_14:68196461-68236507:-|nuORF;ENST00000554523.5_1_14:68228796-68282710:-|nuORF;nc|ENSG00000072121|Q68DK2-2|ZFYVE26;nc|ENSG00000072121|Q68DK2-3|ZFYVE26;nc|ENSG00000072121|Q68DK2-5|ZFYVE26;ZFYVE26|p.D2439Efs*31|1|0.04|ENSG00000072121|chr14:67752398-67752399|-/T|frameshift_variant;ZFYVE26|p.D2513Mfs*3|1|0.29|ENSG00000072121|chr14:67748519-67748519|C/-|frameshift_variant	40.77816245573522	0.41113185337114944	3				NaN	NaN	0	NaN	3653	3650	7298
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7316	24.071	NaN	6703.6	30	0	721.1	0.214	+			14129	GSLRPFVQK	9	71	516.3037841191887	1030.5930153051772	2	516.3037719726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSLRPFVQK_	ENSG00000112297|ENST00000633556|CRYBG1;nc|ENSG00000112297|Q9Y4K1-1|CRYBG1;nc|ENSG00000112297|Q9Y4K1-2|CRYBG1	67.49366992349736	0.1516260258713357	3				NaN	NaN	0	NaN	3661	3653	7315
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7317	24.074	NaN	9372.9	30	0	1376.2	0.106	+			39858	STLNVGVNK	9	69	466.26406537326795	930.5135778133359	2	466.2636413574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STLNVGVNK_	AGBL5|p.R813Gfs*68|1|0.4|ENSG00000084693|chr2:27069649-27069649|C/-|frameshift_variant;ENSG00000084693|ENST00000360131|AGBL5;nc|ENSG00000084693|Q8NDL9-2|AGBL5;nc|ENSG00000084693|Q8NDL9-3|AGBL5	141.52041321563706	0.009766778904176347	3				NaN	NaN	0	NaN	3662	3653	7315
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7318	24.076	NaN	4836.2	30	0	827.49	0.106	+			36311	SESDKTAVL	9	68	475.2458255818511	948.4770982305022	2	475.2450256347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SESDKTAVL_	ENSG00000147526|ENST00000317827|TACC1;ENST00000522752.5_1_8:38614850-38697853:+|nuORF;nc|ENSG00000147526|O75410-10|TACC1;nc|ENSG00000147526|O75410-2|TACC1;nc|ENSG00000147526|O75410-3|TACC1;nc|ENSG00000147526|O75410-4|TACC1;nc|ENSG00000147526|O75410-5|TACC1;nc|ENSG00000147526|O75410-6|TACC1;nc|ENSG00000147526|O75410-7|TACC1;nc|ENSG00000147526|O75410-9|TACC1	77.31757898189308	0.1091473830098891	3				NaN	NaN	0	NaN	3663	3653	7315
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7319	24.078	NaN	2901.9	30	0	1488	0.106	+			38117	SPVTAPRVR	9	32	328.198102222048	981.5724772663441	3	328.1977844238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SPVTAPRVR_	ENST00000267079.6_1_12:53881161-53893393:-|nuORF	18.262085536374414	0.6112419832031293	3				NaN	NaN	0	NaN	3664	3653	7315
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7320	24.08	NaN	4981.7	30	0	732.41	0.106	+			39352	STCIYGGAPK	10	65	527.2557081324316	1052.496863331663	2	527.2557373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_STC(Carbamidomethyl (C))IYGGAPK_	DDX5|p.D424Ifs*31|1|0.03|ENSG00000108654|chr17:64500720-64500721|-/AAGCAATTAAT|frameshift_variant;DDX5|p.D572Nfs*6|1|0.04|ENSG00000108654|chr17:64500054-64500055|-/TGACAAGATAGTT|frameshift_variant;DDX5|p.R502Gfs*87|1|0.21|ENSG00000108654|chr17:64500264-64500264|T/-|frameshift_variant;ENSG00000100201|ENST00000403230|DDX17;ENSG00000108654|ENST00000225792|DDX5;ENST00000216019.11_1_22:38888049-38902242:-|nuORF;ENST00000432525.5_1_22:38886367-38903636:-|nuORF;ENST00000581230.5_1_17:62498125-62502378:-|nuORF;ENST00000583894.1_1_17:62499542-62500133:-|nuORF;nc|ENSG00000100201|Q92841-1|DDX17;nc|ENSG00000100201|Q92841-2|DDX17;nc|ENSG00000100201|Q92841-3|DDX17;nc|ENSG00000108654|P17844-2|DDX5	127.46168284122857	0.01679120895519865	3				NaN	NaN	0	NaN	3665	3653	7315
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7321	24.082	NaN	4176.5	30	0	1229	0.106	+			15572	GVGNVRVK	8	65	414.75655769554794	827.4985624578959	2	414.75616455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GVGNVRVK_	ENSG00000181234|ENST00000435159|TMEM132C;TMEM132C|p.D986Mfs*13|1|0.27|ENSG00000181234|chr12:128705920-128705920|G/-|frameshift_variant	53.351449002276354	0.5676011784961348	3				NaN	NaN	0	NaN	3666	3653	7315
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7322	24.084	NaN	2000.8	30	0	352.35	0.037	+			31415	QKLLKMNGPE	10	55	579.3200290087012	1156.6255050842024	2	579.3199462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QKLLKMNGPE_	ENSG00000198431|ENST00000525566|TXNRD1;ENST00000524698.5_2_12:104681148-104742190:+|nuORF;ENST00000525566.5_2_12:104609571-104742190:+|nuORF;ENST00000526390.5_1_12:104683270-104742190:+|nuORF;ENST00000526691.5_1_12:104680955-104742190:+|nuORF;ENST00000526950.1_1_12:104703637-104742190:+|nuORF;nc|ENSG00000198431|Q16881-2|TXNRD1;nc|ENSG00000198431|Q16881-3|TXNRD1;nc|ENSG00000198431|Q16881-4|TXNRD1;nc|ENSG00000198431|Q16881-6|TXNRD1	51.52775601994872	0.4429225830406686	3				NaN	NaN	0	NaN	3667	3653	7315
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7330	24.102	NaN	40194	30	0	6101.1	0.214				-1	 	0	75	439.2534061258811	876.4922593185622	2	439.25299072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3672	3656	7329
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7331	24.105	NaN	7552.5	30	0	855.39	0.106	+			13813	GQNPTNAEVLK	11	73	585.8095171394671	1169.604481345734	2	585.8099365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GQNPTNAEVLK_	ENSG00000092841|ENST00000550697|MYL6;ENSG00000196465|ENST00000695999|MYL6B;ENST00000405661.8_1_12:56547702-56549525:+|nuORF;ENST00000546630.1_1_12:56552185-56553570:+|nuORF;ENST00000547703.5_1_12:56552185-56553570:+|nuORF;ENST00000548725.5_1_12:56552185-56553955:+|nuORF;ENST00000549178.5_1_12:56548807-56551507:+|nuORF;ENST00000550152.5_1_12:56547702-56549709:+|nuORF;nc|ENSG00000092841|P60660-2|MYL6	115.23196543181992	0.02934640941715571	3				NaN	NaN	0	NaN	3673	3656	7329
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7332	24.107	NaN	15192	30	0	4135.3	0.106	+			38204	SQFSGKITVK	10	71	365.5454034732833	1093.61438102005	3	365.5449523925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SQFSGKITVK_	ENSG00000075568|ENST00000186436|TMEM131;TMEM131|p.G555Wfs*10|1|0.32|ENSG00000075568|chr2:97812704-97812705|-/A|frameshift_variant;TMEM131|p.L1469Tfs*5|1|0.43|ENSG00000075568|chr2:97772340-97772341|-/T|frameshift_variant;TMEM131|p.L538Ffs*27|1|0.09|ENSG00000075568|chr2:97813974-97813975|-/A|frameshift_variant;TMEM131|p.N815Ifs*2|1|0.27|ENSG00000075568|chr2:97802749-97802749|T/-|frameshift_variant;TMEM131|p.N815Kfs*9|1|0.31|ENSG00000075568|chr2:97802748-97802749|-/T|frameshift_variant	68.78561909154949	0.2872414881718259	3				NaN	NaN	0	NaN	3674	3656	7329
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7333	24.109	NaN	3347.7	30	0	339.08	0.106	+			11010	FEKDVKGESL	10	74	576.3019686589065	1150.589384384613	2	576.3009643554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FEKDVKGESL_	ENSG00000119888|ENST00000263735|EPCAM	79.48907831485694	0.19979514868675113	3				NaN	NaN	0	NaN	3675	3656	7329
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7334	24.111	NaN	2862	30	0	360.84	0.106			+	-1	MVLVMLNQ	8	60	482.2524545328453	962.4903561324907	2	482.2524719238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_MVLVM(Oxidation (M))LNQ_	REV__KATNAL1|p.H140Nfs*76|1|0.06|ENSG00000102781|chr13:30255522-30255523|-/TATGATTTTTGTTG|frameshift_variant	44.53106598305862	0.628196326904373	3				NaN	NaN	0	NaN	3676	3656	7329
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7335	24.113	NaN	3487.3	30	0	590.68	0.106	+			11971	FVNDDRHVM	9	63	566.7643616306115	1131.5141703280228	2	566.764404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FVNDDRHVM_	ENSG00000129351|ENST00000588657|ILF3;ENST00000587928.5_1_19:10781281-10792148:+|nuORF;nc|ENSG00000129351|Q12906-2|ILF3;nc|ENSG00000129351|Q12906-3|ILF3;nc|ENSG00000129351|Q12906-4|ILF3;nc|ENSG00000129351|Q12906-5|ILF3;nc|ENSG00000129351|Q12906-6|ILF3;nc|ENSG00000129351|Q12906|ILF3	63.53385203322761	0.18415635464017938	3				NaN	NaN	0	NaN	3677	3656	7329
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7336	24.115	NaN	2688.8	30	0	985.56	0.034	+			15061	GTPAGGGFPR	10	58	458.73517505262635	915.4557971720527	2	458.7352294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GTPAGGGFPR_	ENSG00000185650|ENST00000439696|ZFP36L1;ENST00000555997.1_1_14:69256252-69257717:-|nuORF;ZFP36L1|p.G271Vfs*36|1|0.32|ENSG00000185650|chr14:68789738-68789738|C/-|frameshift_variant;ZFP36L1|p.H177Tfs*56|1|0.79|ENSG00000185650|chr14:68790021-68790021|G/-|frameshift_variant;ZFP36L1|p.P274Rfs*33|1|0.26|ENSG00000185650|chr14:68789729-68789729|G/-|frameshift_variant;ZFP36L1|p.S294Afs*13|1|0.33|ENSG00000185650|chr14:68789671-68789671|G/-|frameshift_variant	45.97224482568171	0.49411383603842696	3				NaN	NaN	0	NaN	3678	3656	7329
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7344	24.133	NaN	14468	30	0	2434.9	0.214	+			23256	KYISKPENL	9	69	546.3087205702317	1090.6028882072633	2	546.3089599609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KYISKPENL_	ENSG00000102547|ENST00000409308|CAB39L;ENSG00000135932|ENST00000258418|CAB39;ENST00000493540.1_1_2:231678823-231682621:+|nuORF	141.52041321563706	0.009766778904176347	3				NaN	NaN	0	NaN	3683	3659	7343
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7345	24.136	NaN	5668.1	30	0	3607	0.106	+			30852	QEGKHVIGL	9	53	490.7802883776609	979.5460238221218	2	490.77978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QEGKHVIGL_	ENSG00000149591|ENST00000392951|TAGLN	37.15910966729921	0.4535818937225704	3				NaN	NaN	0	NaN	3684	3659	7343
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7346	24.138	NaN	4397.8	30	0	486.77	0.106	+			33049	REKELAKVTI	10	66	396.24386846026283	1185.7097759809885	3	396.24346923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_REKELAKVTI_	ENSG00000242028|ENST00000442995|HYPK;ENST00000458412.1_2_15:44092902-44093782:+|nuORF;ENST00000498605.1_1_15:44093641-44093782:+|nuORF	44.639436926238396	0.506394993251866	3				NaN	NaN	0	NaN	3685	3659	7343
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7347	24.14	NaN	3200.7	30	0	433.09	0.106	+			18383	IRCKAAIL	8	59	444.2776382361458	886.5407235390916	2	444.2767028808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IRCKAAIL_	ENSG00000172955|ENST00000394899|ADH6;nc|ENSG00000172955|P28332|ADH6	42.47446043378293	0.6409579893742323	3				NaN	NaN	0	NaN	3686	3659	7343
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7348	24.142	NaN	3537	30	0	476.82	0.106			+	-1	EMLEAKSKSL	10	56	384.5367624649912	1150.5884579951737	3	384.5362854003906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_EM(Oxidation (M))LEAKSKSL_	REV__ENSG00000138385|ENST00000260956|SSB;REV__ENST00000461708.1_1_2:170655414-170662397:+|nuORF	46.45678178249821	0.4896490706773647	3				NaN	NaN	0	NaN	3687	3659	7343
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7349	24.144	NaN	3029.4	30	0	1570.7	0.106	+			19945	KEFNPTKP	8	55	480.76134382915814	959.5081347251163	2	480.76068115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KEFNPTKP_	ATXN2L|p.Q1002Kfs*50|2|0.29|ENSG00000168488|chr16:28836029-28836029|G/-|frameshift_variant;ENSG00000168488|ENST00000336783|ATXN2L;ENST00000563314.5_1_16:28834580-28846939:+|nuORF;nc|ENSG00000168488|Q8WWM7-2|ATXN2L;nc|ENSG00000168488|Q8WWM7-3|ATXN2L;nc|ENSG00000168488|Q8WWM7-4|ATXN2L;nc|ENSG00000168488|Q8WWM7-5|ATXN2L;nc|ENSG00000168488|Q8WWM7-6|ATXN2L;nc|ENSG00000168488|Q8WWM7-8|ATXN2L;nc|ENSG00000168488|Q8WWM7-9|ATXN2L	51.33545320467046	0.5859736979383976	3				NaN	NaN	0	NaN	3688	3659	7343
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7350	24.145	NaN	8548.2	30	0	1784.9	0.035	+			14467	GTCFGKFTK	9	75	523.2613522637648	1044.5081515943295	2	523.2680053710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_GTC(Carbamidomethyl (C))FGKFTK_	ENSG00000132603|ENST00000254940|NIP7;ENST00000565034.1_1_16:69373956-69375289:+|nuORF;nc|ENSG00000132603|Q9Y221-2|NIP7	98.58198989935565	0.04066992115528678	3				NaN	NaN	0	NaN	3689	3659	7343
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7358	24.164	NaN	15364	30	0	2923	0.214	+			40921	SVFQTTDTK	9	68	513.7590571089597	1025.5035612847194	2	513.759033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVFQTTDTK_	ENSG00000153130|ENST00000608372|SCOC;nc|ENSG00000153130|Q9UIL1-2|SCOC;nc|ENSG00000153130|Q9UIL1-3|SCOC;nc|ENSG00000153130|Q9UIL1-4|SCOC;nc|ENSG00000153130|Q9UIL1|SCOC	174.8648734531126	0.001936507438084573	3				NaN	NaN	0	NaN	3694	3662	7357
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7359	24.167	NaN	8405.7	30	0	1654.1	0.106				-1	GTCFGKFTK	9	74	523.2613522637648	1044.5081515943295	2	523.2614135742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GTC(Carbamidomethyl (C))FGKFTK_	ENSG00000132603|ENST00000254940|NIP7;ENST00000565034.1_1_16:69373956-69375289:+|nuORF;nc|ENSG00000132603|Q9Y221-2|NIP7	98.58198989935565	0.04066992115528678	3				NaN	NaN	0	NaN	3695	3662	7357
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7360	24.169	NaN	16806	30	0	4116	0.106	+			28200	NASRDQVVY	9	73	526.2620080965771	1050.5094632599541	2	526.2623901367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NASRDQVVY_	ENSG00000167608|ENST00000619895|TMC4;nc|ENSG00000167608|Q7Z404-1|TMC4;nc|ENSG00000167608|Q7Z404|TMC4;TMC4|p.F240Lfs*221|1|0.42|ENSG00000167608|chr19:54168267-54168268|AA/-|frameshift_variant;TMC4|p.Q383Rfs*6|1|0.37|ENSG00000167608|chr19:54163872-54163872|G/-|frameshift_variant	72.87924865735499	0.12833875048249987	3				NaN	NaN	0	NaN	3696	3662	7357
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7361	24.171	NaN	3280.3	30	0	420.72	0.106	+			20612	KGDGKTCDPS	10	63	504.22547154202346	1006.4363901508469	2	504.2247314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KGDGKTCDPS_	ENSG00000134569|ENST00000378623|LRP4	36.31764250033197	0.5830761606467809	3				NaN	NaN	0	NaN	3697	3662	7357
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7362	24.173	NaN	3652.2	30	0	181.09	0.106	+			36227	SELVQKAKL	9	70	508.31102715079624	1014.6075013683925	2	508.3103332519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SELVQKAKL_	ENSG00000166913|ENST00000353703|YWHAB;nc|ENSG00000166913|P31946-2|YWHAB	101.45984612302182	0.0377122763612125	3				NaN	NaN	0	NaN	3698	3662	7357
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7363	24.174	NaN	1158.3	30	0	146.05	0.106	+			42229	TAALAHTSY	9	53	467.7355194916769	933.4564860501538	2	468.2371520996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TAALAHTSY_	ENSG00000205277|ENST00000536621|MUC12;nc|ENSG00000205277|Q9UKN1|MUC12	37.15910966729921	0.4535818937225704	3				NaN	NaN	0	NaN	3699	3662	7357
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7364	24.176	NaN	3590.4	30	0	877.19	0.04	+			46975	VKLCRECLEKQ	11	57	450.2396596036679	1347.6971494112038	3	450.2361755371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VKLCRECLEKQ_	ENSG00000115593|ENST00000419482|SMYD1	34.50088687433636	0.6279050307224145	3				NaN	NaN	0	NaN	3700	3662	7357
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7372	24.195	NaN	7171.4	30	0	1523.2	0.214				-1	AVIPNCGTPK	10	77	528.7793943414976	1055.544235749795	2	528.7794189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_AVIPNC(Carbamidomethyl (C))GTPK_	ENSG00000168386|ENST00000477258|FILIP1L;nc|ENSG00000168386|Q4L180-2|FILIP1L;nc|ENSG00000168386|Q4L180-3|FILIP1L;nc|ENSG00000168386|Q4L180-5|FILIP1L;nc|ENSG00000168386|Q4L180-6|FILIP1L;nc|ENSG00000168386|Q4L180-7|FILIP1L;nc|ENSG00000168386|Q4L180|FILIP1L	42.86426827375447	0.522752283233888	3				NaN	NaN	0	NaN	3705	3665	7371
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7373	24.198	NaN	2766.7	30	0	531.81	0.106	+			7376	DDPLSAVDAH	10	49	520.2383894688336	1038.462226004467	2	520.2383422851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DDPLSAVDAH_	ABCC12|p.L626M|1|0.33|ENSG00000140798|chr16:48115528-48115528|G/T|missense_variant;ABCC12|p.M936Yfs*84|1|0.32|ENSG00000140798|chr16:48104236-48104237|-/A|frameshift_variant;ABCC12|p.R1075Cfs*54|1|0.38|ENSG00000140798|chr16:48091182-48091183|-/CA|frameshift_variant;ABCC2|p.G853Efs*7|1|0.28|ENSG00000023839|chr10:99819200-99819200|A/-|frameshift_variant;ENSG00000023839|ENST00000647814|ABCC2;ENSG00000103222|ENST00000399410|ABCC1;ENSG00000121270|ENST00000356608|ABCC11;ENSG00000140798|ENST00000311303|ABCC12;nc|ENSG00000103222|P33527-2|ABCC1;nc|ENSG00000103222|P33527-4|ABCC1;nc|ENSG00000103222|P33527-6|ABCC1;nc|ENSG00000103222|P33527-9|ABCC1;nc|ENSG00000121270|Q96J66-2|ABCC11;nc|ENSG00000140798|Q96J65-2|ABCC12;nc|ENSG00000140798|Q96J65-3|ABCC12;nc|ENSG00000140798|Q96J65-5|ABCC12;nc|ENSG00000140798|Q96J65|ABCC12	16.473147378115264	0.7327422906225664	3				NaN	NaN	0	NaN	3706	3665	7371
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7374	24.2	NaN	1176.6	30	0	189.59	0.106			+	21254	KLLEDHIQ	8	52	498.2802272492174	994.5459015652348	2	498.2795104980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KLLEDHIQ_	REV__ENSG00000107719|ENST00000263563|PALD1	68.78682469695295	0.41700713582915416	3				NaN	NaN	0	NaN	3707	3665	7371
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7375	24.202	NaN	1213.8	30	0	177.95	0.106	+			3241	ASLDYLSNQ	9	58	505.7432445255488	1009.4719361178976	2	505.74273681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASLDYLSNQ_	ANGPTL5|p.E292Kfs*30|1|0.47|ENSG00000187151|chr11:101891573-101891573|T/-|frameshift_variant;ENSG00000187151|ENST00000334289|ANGPTL5	36.446750945000026	0.4619375763483977	3				NaN	NaN	0	NaN	3708	3665	7371
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7376	24.204	NaN	2323.2	30	0	594.09	0.106			+	49048	VVILESRG	8	48	436.76379066890377	871.5130284046076	2	436.7634582519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVILESRG_	REV__ENSG00000006747|ENST00000297029|SCIN;REV__nc|ENSG00000006747|Q9Y6U3-2|SCIN	47.91560031466742	0.6071945918984287	3				NaN	NaN	0	NaN	3709	3665	7371
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7377	24.206	NaN	1774.4	30	0	331.82	0.106	+			21539	KNSSLLAKF	9	41	336.5344587012951	1006.5815467040852	3	336.53448486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KNSSLLAKF_	tr|U7SW10|U7SW10_FUSNU23SrRNApseudouridine955/2504/2580synthaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01414PE=3SV=1	23.04248740728303	0.5879033540491928	3				NaN	NaN	0	NaN	3710	3665	7371
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7378	24.207	NaN	6795.3	30	0	679.15	0.034	+			8524	EAVAHEFQ	8	64	465.71973978064335	929.4249266280867	2	465.7193603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EAVAHEFQ_	ENSG00000186260|ENST00000571589|MRTFB;ENST00000572400.5_1_16:14234415-14234826:+|nuORF;ENST00000575537.5_1_16:14234415-14243171:+|nuORF;ENST00000575833.1_1_16:14234415-14235225:+|nuORF;nc|ENSG00000186260|Q9ULH7-4|MRTFB	45.9519527083369	0.6193794311207887	3				NaN	NaN	0	NaN	3711	3665	7371
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7389	24.231	NaN	11282	30	0	960.04	0.214			+	45123	TVKERLGK	8	77	465.7903615253372	929.5661701174744	2	465.7897644042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVKERLGK_	REV__ENSG00000133454|ENST00000335473|MYO18B;REV__nc|ENSG00000133454|Q8IUG5-2|MYO18B;REV__nc|ENSG00000133454|Q8IUG5-3|MYO18B	62.107414245175825	0.4809183816468817	3				NaN	NaN	0	NaN	3719	3668	7388
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7390	24.234	NaN	5883.7	30	0	1015.8	0.106	+			10222	ETGYGKTRLI	10	71	569.316033438882	1136.6175139445638	2	569.316162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ETGYGKTRLI_	RNF213|p.C2424Y|1|0.17|ENSG00000173821|chr17:80345606-80345606|G/A|missense_variant	56.632244143249146	0.3964695498866976	3				NaN	NaN	0	NaN	3720	3668	7388
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7391	24.236	NaN	5868.3	30	0	680.52	0.106			+	33677	RNPNWLMA	8	79	509.25084312014843	1016.4871333070969	2	509.2503662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_RNPNWLM(Oxidation (M))A_	REV__ENST00000269142.9_1_18:23806727-23806883:+|nuORF	42.47446043378293	0.6409579893742323	3				NaN	NaN	0	NaN	3721	3668	7388
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7392	24.238	NaN	5429	30	0	728.81	0.106				-1	 	0	75	502.7747087748886	1003.5348646165772	2	502.7741394042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3722	3668	7388
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7393	24.24	NaN	4656.4	30	0	288.12	0.106	+			34152	RSYHLQIVTK	10	62	415.57582791455195	1243.705654343856	3	415.57537841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RSYHLQIVTK_	ENSG00000131203|ENST00000518237|IDO1	89.56079334093651	0.1335884292564383	3				NaN	NaN	0	NaN	3723	3668	7388
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7394	24.242	NaN	3786.8	30	0	790.88	0.035	+			30350	PTVVCRPNL	9	51	499.7768473847405	997.539141836281	2	499.7759094238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PTVVCRPNL_	CSN3|p.R109C|1|0.06|ENSG00000171209|chr4:70249235-70249235|C/T|missense_variant	35.61828744233558	0.47037581924408073	3				NaN	NaN	0	NaN	3724	3668	7388
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7395	24.242	NaN	1799.8	30	0	226.3	0.138	+			47831	VSKVNLPV	8	52	428.2688297115963	854.5231064899926	2	428.26849365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VSKVNLPV_	HERVH-int_dup4765|chr13:43060715-43061388:-|2.073122916940509|0.3800345561863495|2.45|479.0|36|3|anti-sense	44.116797842482775	0.6307669463330267	3				NaN	NaN	0	NaN	3725	3668	7388
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7405	24.266	NaN	3203.8	30	0	371.89	0.214	+			42230	TAALAHTSY	9	57	467.7355194916769	933.4564860501538	2	467.73480224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAALAHTSY_	ENSG00000205277|ENST00000536621|MUC12;nc|ENSG00000205277|Q9UKN1|MUC12	94.00642277110589	0.05356993013874309	3				NaN	NaN	0	NaN	3732	3671	7404
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7406	24.27	NaN	5725.6	30	0	1311.8	0.106	+			41964	SVWHGTLSK	9	63	507.77154981709566	1013.5285467009913	2	507.77215576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVWHGTLSK_	ENSG00000136270|ENST00000258770|TBRG4;nc|ENSG00000136270|Q969Z0-2|TBRG4;TBRG4|p.L492Cfs*9|2|0.32|ENSG00000136270|chr7:45101918-45101918|G/-|frameshift_variant	104.0567914643314	0.03506238181059741	3				NaN	NaN	0	NaN	3733	3671	7404
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7407	24.271	NaN	6185.2	30	0	927.14	0.106				-1	 	0	69	502.7747087748886	1003.5348646165772	2	502.77410888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3734	3671	7404
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7408	24.273	NaN	4803.8	30	0	750.4	0.106				-1	 	0	53	398.7742981327962	795.5340433323925	2	398.773681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3735	3671	7404
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7409	24.275	NaN	4452.5	30	0	409.44	0.106	+			16193	HEAQIQEM	8	60	493.22443719468475	984.4343214561695	2	493.2237548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HEAQIQEM_	ENSG00000100345|ENST00000216181|MYH9;SYNDIG1-MYH9|1|fusion	51.19269402634007	0.5868595481438337	3				NaN	NaN	0	NaN	3736	3671	7404
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7410	24.277	NaN	3341.2	30	0	711.23	0.039				-1	 	0	70	647.3074970150018	646.3002205484017	1	647.3070068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3737	3671	7404
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7411	24.278	NaN	9089.5	30	0	2074.4	0.142				-1	 	0	70	473.2723930855102	944.5302332378204	2	473.2714538574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3738	3671	7404
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7417	24.295	NaN	14449	30	0	3143.6	0.214	+			45171	TVMDKTRAL	9	84	517.7869049894814	1033.5592570457627	2	517.7872314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVMDKTRAL_	CARD17-CASP1|1|fusion;CARD17-CASP1|2|fusion;CASP1|p.N205Ifs*7|1|0.4|ENSG00000137752|chr11:105030343-105030343|T/-|frameshift_variant;ENSG00000137752|ENST00000533400|CASP1;ENSG00000204397|ENST00000673097|CARD16;ENST00000526511.5_1_11:104901858-104905840:-|nuORF;ENST00000527065.1_1_11:104915107-104915377:-|nuORF;nc|ENSG00000137752|P29466-2|CASP1;nc|ENSG00000204397|Q5EG05|CARD16	93.1432384553994	0.056003526918089595	3				NaN	NaN	0	NaN	3741	3674	7416
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7418	24.299	NaN	2854.1	30	0	603.87	0.106				-1	 	0	43	379.74258643089746	757.4706199285949	2	379.7420349121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3742	3674	7416
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7419	24.301	NaN	1504.5	30	0	180.61	0.106	+			1357	AEVEAQKAQQL	11	65	607.822521670538	1213.6304904078759	2	607.8226318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEVEAQKAQQL_	ENSG00000088325|ENST00000300403|TPX2;nc|ENSG00000088325|Q9ULW0-2|TPX2	109.82975700811294	0.04036548564786578	3				NaN	NaN	0	NaN	3743	3674	7416
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7420	24.303	NaN	2523	30	0	431.63	0.106			+	32008	QRLCVGVPFV	10	47	373.2098085112993	NaN	0	373.20941162109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QRLCVGVPFV_	REV__ENST00000262585.6_3_8:142204541-142204589:+|nuORF	22.579656572578934	0.4201028297492154	3				NaN	NaN	0	NaN	3744	3674	7416
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7421	24.305	NaN	1741.5	30	0	166.37	0.106	+			23873	LDGDTRGGA	9	54	431.20550726134513	860.3964615894903	2	431.2051086425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LDGDTRGGA_	tr|U7T8Q8|U7T8Q8_FUSNUSignalrecognitionparticleproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=ffhPE=3SV=1	44.116797842482775	0.37197099687881774	3				NaN	NaN	0	NaN	3745	3674	7416
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7422	24.306	NaN	688.61	30	0	194.57	0.03				-1	 	0	23	333.22115170341306	664.4277504736261	2	333.2209777832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3746	3674	7416
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7430	24.325	NaN	24526	30	0	13856	0.214			+	-1	SLTCIKNKA	9	58	345.5270773447101	1033.5594026343304	3	345.5270080566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SLTC(Carbamidomethyl (C))IKNKA_	REV__ENSG00000165392|ENST00000298139|WRN;REV__WRN|p.D1302Ifs*7|1|0.24|ENSG00000165392|chr8:31157445-31157445|C/-|frameshift_variant	51.19269402634007	0.2889735674168909	3				NaN	NaN	0	NaN	3751	3677	7429
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7431	24.328	NaN	9096.8	30	0	1664.5	0.106			+	32716	RALFDAGIR	9	84	509.7939131330834	1017.5732733329668	2	509.7934265136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RALFDAGIR_	REV__ENSG00000120053|ENST00000370508|GOT1;REV__nc|ENSG00000120053|P17174-2|GOT1	49.536043120802724	0.308405419312776	3				NaN	NaN	0	NaN	3752	3677	7429
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7432	24.33	NaN	3685.6	30	0	649.15	0.106	+			12980	GETNSLIKK	9	59	495.2852002273279	988.5558475214558	2	495.2847900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GETNSLIKK_	ENSG00000137462|ENST00000642700|TLR2	71.87747018426188	0.13267044672804276	3				NaN	NaN	0	NaN	3753	3677	7429
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7433	24.332	NaN	2666.1	30	0	1128.7	0.106	+			30495	QAFESSQKY	9	65	544.2571772076836	1086.4998014821672	2	544.2572021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QAFESSQKY_	ENSG00000090238|ENST00000398841|YPEL3;ENST00000565479.5_1_16:30104033-30107516:-|nuORF;nc|ENSG00000090238|P61236|YPEL3	60.11826168202944	0.21262886028301267	3				NaN	NaN	0	NaN	3754	3677	7429
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7434	24.334	NaN	1424.1	30	0	195.97	0.106			+	46099	VDDANRLLQ	9	57	522.2777706635253	1042.5409883938505	2	522.2780151367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VDDANRLLQ_	REV__ENSG00000171798|ENST00000304613|KNDC1	44.116797842482775	0.37197099687881774	3				NaN	NaN	0	NaN	3755	3677	7429
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7435	24.335	NaN	1193	30	0	120.06	0.106	+			22936	KVQEMNYIQK	10	63	640.8378739554968	1279.6611949777935	2	640.8373413085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KVQEMNYIQK_	ENSG00000068366|ENST00000672401|ACSL4;nc|ENSG00000068366|O60488|ACSL4	85.86182877749512	0.1547657473298402	3				NaN	NaN	0	NaN	3756	3677	7429
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7436	24.337	NaN	1094.6	30	0	105.43	0.038	+			16455	HETDFNGQKL	10	56	594.7864245913064	1187.5582962494127	2	594.7860107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HETDFNGQKL_	ENSG00000117602|ENST00000374395|RCAN3;nc|ENSG00000117602|Q9UKA8-2|RCAN3;nc|ENSG00000117602|Q9UKA8-3|RCAN3	70.8162118820467	0.27065172005956	3				NaN	NaN	0	NaN	3757	3677	7429
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7445	24.357	NaN	2609.5	30	0	243.03	0.214			+	23629	LAQFKGNG	8	56	417.7286413242329	833.4427297152658	2	417.7286682128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LAQFKGNG_	REV__nc|ENSG00000158816|Q5TIE3|VWA5B1	52.29916861842294	0.578018602984656	3				NaN	NaN	0	NaN	3763	3680	7444
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7446	24.361	NaN	2408.7	30	0	784.2	0.106				-1	SVMKMGEPYIK	11	48	433.5541536952221	1297.6406316858663	3	433.8880920410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_SVM(Oxidation (M))KMGEPYIK_	tr|U7T126|U7T126_FUSNUAcyltransferase3domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00666PE=4SV=1	26.749707702089633	0.7092085788826945	3				NaN	NaN	0	NaN	3764	3680	7444
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7447	24.363	NaN	1289.8	30	0	237.39	0.106			+	36984	SINRKNER	8	32	339.52361087184204	1015.5490032157261	3	339.5233154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SINRKNER_	REV__ENSG00000203952|ENST00000695460|CCDC160	32.81241826257853	0.7059802730411993	3				NaN	NaN	0	NaN	3765	3680	7444
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7448	24.365	NaN	1673.4	30	0	315.43	0.106				-1	SALIEERDA	9	63	523.2613522637648	1044.5081515943295	2	523.7636108398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SALIEERDA_	ENSG00000151338|ENST00000684589|MIPOL1;ENST00000553349.1_1_14:37754581-37892775:+|nuORF;ENST00000554930.5_1_14:37667225-37854725:+|nuORF;ENST00000556940.1_1_14:37777682-37838859:+|nuORF;nc|ENSG00000151338|Q8TD10-2|MIPOL1	40.05817265558897	0.419577045485086	3				NaN	NaN	0	NaN	3766	3680	7444
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7449	24.366	NaN	1615.1	30	0	135.85	0.106			+	13596	GLVMALWP	8	58	443.7451676880513	885.4757824429026	2	443.7442321777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GLVMALWP_	REV__ENSG00000187010|ENST00000328664|RHD;REV__ENSG00000188672|ENST00000294413|RHCE;REV__ENST00000527187.5_1_1:25712128-25747316:-|nuORF;REV__ENST00000564398.5_1_1:25598999-25633293:+|nuORF;REV__nc|ENSG00000187010|Q02161-2|RHD;REV__nc|ENSG00000187010|Q02161-3|RHD;REV__nc|ENSG00000187010|Q02161-4|RHD;REV__nc|ENSG00000187010|Q02161-5|RHD;REV__nc|ENSG00000187010|Q02161-6|RHD;REV__nc|ENSG00000188672|P18577-10|RHCE;REV__nc|ENSG00000188672|P18577-11|RHCE;REV__nc|ENSG00000188672|P18577-2|RHCE;REV__nc|ENSG00000188672|P18577-3|RHCE;REV__nc|ENSG00000188672|P18577-5|RHCE;REV__nc|ENSG00000188672|P18577-6|RHCE;REV__nc|ENSG00000188672|P18577-7|RHCE;REV__RHCE|p.G308Efs*51|1|0.21|ENSG00000188672|chr1:25388992-25388992|C/-|frameshift_variant	43.626045697637714	0.6338121648150432	3				NaN	NaN	0	NaN	3767	3680	7444
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7450	24.368	NaN	1487	30	0	184.69	0.106			+	10980	FEECLIAV	8	54	462.23162841796875	NaN	0	462.23162841796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FEECLIAV_	REV__ENSG00000104635|ENST00000381237|SLC39A14;REV__nc|ENSG00000104635|Q15043-2|SLC39A14;REV__nc|ENSG00000104635|Q15043-3|SLC39A14	44.53106598305862	1.7418937515398478	3				NaN	NaN	0	NaN	3768	3680	7444
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7451	24.37	NaN	1904	30	0	191.02	0.036	+			45557	TYLELPISR	9	62	546.3087205702317	1090.6028882072633	2	546.8115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TYLELPISR_	HERV1_I-int_dup2|chr3:34679996-34686397:+|1.0948245018220069|0.0565463038051543|4.28|448.0|251|2|anti-sense	31.529811441608018	0.5085848003137583	3				NaN	NaN	0	NaN	3769	3680	7444
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7459	24.388	NaN	3152.6	30	0	360.61	0.214	+			34910	SAAELRHVM	9	55	507.2638320690651	NaN	0	507.26373291015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAAELRHVM_	CALML3|p.E115Rfs*3|1|0.35|ENSG00000178363|chr10:5525424-5525424|G/-|frameshift_variant;ENSG00000143933|ENST00000272298|CALM2;ENSG00000160014|ENST00000291295|CALM3;ENSG00000178363|ENST00000315238|CALML3;ENSG00000198668|ENST00000356978|CALM1;ENST00000482532.5_1_2:47387917-47389823:-|nuORF;ENST00000597868.5_1_19:47111871-47112407:+|nuORF	45.97224482568171	0.23445038899310136	3				NaN	NaN	0	NaN	3774	3683	7458
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7460	24.392	NaN	3056.4	30	0	383.87	0.106	+			12475	GEDPNKAEEL	10	63	551.2572253152537	1100.4998976973072	2	551.2572631835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEDPNKAEEL_	ENSG00000173545|ENST00000308683|ZNF622	59.93077597824379	0.36646980200755325	3				NaN	NaN	0	NaN	3775	3683	7458
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7461	24.394	NaN	1360.3	30	0	181.09	0.106	+			46058	VCGRPGAAL	9	44	422.22930508904807	842.4440572448962	2	422.2290954589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VCGRPGAAL_	ENSG00000089063|ENST00000342308|TMEM230;ENST00000202834.11_1_20:5090072-5093674:-|nuORF;ENST00000379299.6_1_20:5093602-5093659:-|nuORF	53.351449002276354	0.2690372970092375	3				NaN	NaN	0	NaN	3776	3683	7458
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7462	24.395	NaN	2580.9	30	0	255.11	0.106	+			16872	HPGQISAGY	9	60	465.2276415593146	928.4407301854292	2	465.2275085449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HPGQISAGY_	ENSG00000101210|ENST00000217182|EEF1A2;ENSG00000156508|ENST00000309268|EEF1A1;ENST00000436459.2_1_9:135895553-135896258:+|nuORF;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	60.97194046774394	0.20551255781574032	3				NaN	NaN	0	NaN	3777	3683	7458
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7463	24.397	NaN	2520.1	30	0	203.49	0.106			+	9126	EGLHVALAAL	10	61	497.29075354141673	992.5669541496335	2	497.2901916503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EGLHVALAAL_	REV__ENSG00000187741|ENST00000389301|FANCA;REV__FANCA|p.E800Gfs*16|1|0.13|ENSG00000187741|chr16:89769934-89769944|CATCCACCTCT/-|frameshift_variant;REV__FANCA|p.G972Afs*17|1|0.37|ENSG00000187741|chr16:89758643-89758643|C/-|frameshift_variant;REV__FANCA|p.V925Rfs*18|1|0.2|ENSG00000187741|chr16:89764895-89764896|-/G|frameshift_variant;REV__nc|ENSG00000187741|O15360-3|FANCA	47.91560031466742	0.4762067885998563	3				NaN	NaN	0	NaN	3778	3683	7458
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7464	24.399	NaN	3045.3	30	0	995.17	0.036			+	25843	LSEKQSIVY	9	67	533.7932923887761	1065.572031844352	2	533.7929077148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSEKQSIVY_	REV__CEP97|p.K618Nfs*15|1|0.41|ENSG00000182504|chr3:101762516-101762516|A/-|frameshift_variant;REV__ENSG00000182504|ENST00000341893|CEP97;REV__ENST00000489172.5_1_3:101443520-101477325:+|nuORF;REV__nc|ENSG00000182504|Q8IW35-2|CEP97	55.50420428727701	0.2510918378945873	3				NaN	NaN	0	NaN	3779	3683	7458
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7465	24.4	NaN	1280.2	30	0	166.61	0.139			+	7545	DGWFSFIN	8	52	493.22443719468475	984.4343214561695	2	492.7444763183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DGWFSFIN_	REV__ENSG00000055118|ENST00000262186|KCNH2;REV__nc|ENSG00000055118|Q12809-2|KCNH2;REV__nc|ENSG00000055118|Q12809-4|KCNH2;REV__nc|ENSG00000055118|Q12809-7|KCNH2	25.450171626174864	0.7628259754767981	3				NaN	NaN	0	NaN	3780	3683	7458
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7472	24.418	NaN	3706.3	30	0	394.22	0.215				-1	AECEGLTKQA	10	64	553.759537679307	1105.5045224254138	2	553.759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_AEC(Carbamidomethyl (C))EGLTKQA_	ENSG00000196632|ENST00000354646|WNK3;nc|ENSG00000196632|Q9BYP7-2|WNK3;nc|ENSG00000196632|Q9BYP7-3|WNK3;nc|ENSG00000196632|Q9BYP7-4|WNK3;WNK3|p.I1462Rfs*3|1|0.37|ENSG00000196632|chrX:54237181-54237182|-/TC|frameshift_variant;WNK3|p.N1685Tfs*71|1|0.19|ENSG00000196632|chrX:54202010-54202010|T/-|frameshift_variant	56.72105179125745	0.3956618550748046	3				NaN	NaN	0	NaN	3784	3686	7471
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7473	24.421	NaN	2961.2	30	0	284.95	0.106	+			12774	GELPEHAKI	9	64	497.2725025035568	992.5304520739136	2	497.2718505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GELPEHAKI_	ENSG00000173674|ENST00000379607|EIF1AX;ENSG00000198692|ENST00000361365|EIF1AY;ENST00000485584.1_1_Y:22749894-22754229:+|nuORF	52.936696900407355	0.27249468807391813	3				NaN	NaN	0	NaN	3785	3686	7471
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7474	24.423	NaN	2706.8	30	0	1370.6	0.106	+			10595	EYKTVHEEL	9	62	574.2855795955276	1146.556606257855	2	574.2857055664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EYKTVHEEL_	DOCK9|p.N1450Mfs*6|1|0.28|ENSG00000088387|chr13:98831683-98831683|T/-|frameshift_variant;DOCK9|p.T1335Yfs*4|2|0.43|ENSG00000088387|chr13:98850057-98850058|-/A|frameshift_variant;ENSG00000088387|ENST00000682017|DOCK9;nc|ENSG00000088387|Q9BZ29-3|DOCK9;nc|ENSG00000088387|Q9BZ29-4|DOCK9;nc|ENSG00000088387|Q9BZ29-5|DOCK9;nc|ENSG00000088387|Q9BZ29-6|DOCK9;nc|ENSG00000088387|Q9BZ29|DOCK9	42.396135135203025	0.392153681582562	3				NaN	NaN	0	NaN	3786	3686	7471
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7475	24.425	NaN	1719	30	0	356.05	0.106	+			3294	ASLSGSLSAK	10	47	460.75575135738455	NaN	0	460.7554016113281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASLSGSLSAK_	ENST00000588822.1_1_17:74723429-74729181:+|nuORF;ENST00000589977.5_1_17:74725800-74729181:+|nuORF;ENST00000590964.5_1_17:74722977-74729181:+|nuORF	41.42661286455405	0.3598046802465243	3				NaN	NaN	0	NaN	3787	3686	7471
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7476	24.427	NaN	994.63	30	0	71.315	0.106			+	51063	YLKPDTLPQL	10	52	594.3348999023438	NaN	0	594.3348999023438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YLKPDTLPQL_	REV__ENSG00000173653|ENST00000309657|RCE1;REV__ENST00000533277.5_1_11:66613305-66613563:+|nuORF	33.03940026070387	0.39169079679423546	3				NaN	NaN	0	NaN	3788	3686	7471
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7477	24.429	NaN	1475.1	30	0	134.68	0.106	+			32395	QVDGVFVALP	10	61	522.7883180939829	NaN	0	522.7879638671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QVDGVFVALP_	ENSG00000275395|ENST00000616721|FCGBP;nc|ENSG00000275395|Q9Y6R7|FCGBP	44.116797842482775	0.3427969396372342	3				NaN	NaN	0	NaN	3789	3686	7471
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7478	24.43	NaN	1135.4	30	0	193.95	0.036				-1	VSCTSIYEK	9	61	543.7603961427991	NaN	0	543.7606201171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_VSC(Carbamidomethyl (C))TSIYEK_	ATP13A3|p.F1107Lfs*5|1|0.42|ENSG00000133657|chr3:194419960-194419960|A/-|frameshift_variant;ATP13A3|p.I476Sfs*11|1|0.19|ENSG00000133657|chr3:194446998-194446998|T/-|frameshift_variant;ATP13A3|p.L1114Ffs*17|1|0.25|ENSG00000133657|chr3:194419939-194419940|-/A|frameshift_variant;ATP13A3|p.L1114Yfs*22|1|0.23|ENSG00000133657|chr3:194419940-194419940|A/-|frameshift_variant;ATP13A3|p.P1198Lfs*19|1|0.04|ENSG00000133657|chr3:194406007-194406008|-/ATATAGTA|frameshift_variant;ATP13A3|p.S1110Ffs*21|2|0.22|ENSG00000133657|chr3:194419952-194419953|-/A|frameshift_variant;ATP13A3|p.V1108Cfs*23|1|0.26|ENSG00000133657|chr3:194419959-194419960|-/A|frameshift_variant;ENSG00000133657|ENST00000645319|ATP13A3;nc|ENSG00000133657|Q9H7F0|ATP13A3	31.529811441608018	0.3183796599642538	3				NaN	NaN	0	NaN	3790	3686	7471
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7485	24.448	NaN	3109.6	30	0	455.9	0.214	+			45093	TVIHFNNPK	9	63	535.2941564445524	1068.5737599559047	2	535.29345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVIHFNNPK_	ENSG00000134717|ENST00000313334|BTF3L4;ENSG00000145741|ENST00000380591|BTF3;ENST00000418879.1_1_6:137865036-137865375:-|nuORF;nc|ENSG00000134717|Q96K17-2|BTF3L4;nc|ENSG00000145741|P20290-2|BTF3	70.8162118820467	0.13725933411854815	3				NaN	NaN	0	NaN	3794	3689	7484
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7486	24.452	NaN	3796.2	30	0	551.8	0.106	+			23162	KVYNGILEK	9	72	532.311787154689	1062.609021376178	2	532.3118286132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVYNGILEK_	ENSG00000109689|ENST00000467087|STIM2;ENST00000467011.5_1_4:27022655-27024615:+|nuORF;nc|ENSG00000109689|Q9P246-2|STIM2;STIM2|p.S735Lfs*9|1|0.08|ENSG00000109689|chr4:27022958-27022959|-/TGTA|frameshift_variant	85.16082228582465	0.07850854922700509	3				NaN	NaN	0	NaN	3795	3689	7484
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7487	24.454	NaN	3901.8	30	0	451.63	0.106	+			43923	TPAGVVNKY	9	66	474.76156469980805	947.5085764664161	2	474.76092529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TPAGVVNKY_	ENSG00000172893|ENST00000355527|DHCR7	131.03138772384656	0.014687601201650916	3				NaN	NaN	0	NaN	3796	3689	7484
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7488	24.456	NaN	1608.6	30	0	249.97	0.106			+	9223	EGSLRNEL	8	61	459.2385336709227	916.4625144086455	2	459.23828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EGSLRNEL_	REV__ENSG00000066933|ENST00000356056|MYO9A;REV__ENST00000563542.5_1_15:72185266-72338904:-|nuORF;REV__MYO9A|p.L1961*|2|0.14|ENSG00000066933|chr15:71878089-71878089|A/-|frameshift_variant;REV__MYO9A|p.Y1422Ifs*8|1|0.18|ENSG00000066933|chr15:71898239-71898239|A/-|frameshift_variant;REV__nc|ENSG00000066933|B2RTY4-2|MYO9A;REV__nc|ENSG00000066933|B2RTY4-3|MYO9A;REV__nc|ENSG00000066933|B2RTY4-4|MYO9A	64.20726635412375	0.4601301477144759	3				NaN	NaN	0	NaN	3797	3689	7484
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7489	24.457	NaN	1358.4	30	0	89.784	0.106				-1	TEAIMHDC	8	52	488.6966649645759	NaN	0	488.6966247558594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_TEAIMHDC(Carbamidomethyl (C))_	EIF4G1|p.P1229Qfs*2|1|0.18|ENSG00000114867|chr3:184327606-184327606|C/-|frameshift_variant;EIF4G3|p.A945Qfs*16|1|0.25|ENSG00000075151|chr1:20864482-20864482|T/-|frameshift_variant;EIF4G3|p.F1258Lfs*2|1|0.43|ENSG00000075151|chr1:20840975-20840975|A/-|frameshift_variant;EIF4G3|p.I1064Nfs*6|1|0.32|ENSG00000075151|chr1:20855052-20855053|-/T|frameshift_variant;ENSG00000075151|ENST00000602326|EIF4G3;ENSG00000114867|ENST00000346169|EIF4G1;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;nc|ENSG00000075151|O43432-3|EIF4G3;nc|ENSG00000075151|O43432-4|EIF4G3;nc|ENSG00000075151|O43432|EIF4G3;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1	57.81127852772723	1.7418937515398478	3				NaN	NaN	0	NaN	3798	3689	7484
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7490	24.459	NaN	717.82	30	0	90.817	0.038			+	47857	VSLGEKNCQIN	11	40	602.8037932477439	NaN	0	602.8040771484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VSLGEKNCQIN_	REV__nc|ENSG00000121904|Q7Z408-3|CSMD2	41.42661286455405	0.376895999158515	3				NaN	NaN	0	NaN	3799	3689	7484
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7491	24.46	NaN	2284.7	30	0	265.25	0.141	+			29714	PHICNPSTL	9	57	491.24503843457654	980.4755239359531	2	491.2443542480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PHICNPSTL_	ENST00000366329.6_1_12:123741748-123741847:+|nuORF	37.15910966729921	0.4535818937225704	3				NaN	NaN	0	NaN	3800	3689	7484
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7500	24.482	NaN	5548.9	30	0	626.28	0.214				-1	MTGNVVASI	9	57	454.23239811581016	906.4502432984203	2	454.2332763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))TGNVVASI_	ENSG00000135298|ENST00000370598|ADGRB3	64.20726635412375	0.17854274437659667	3				NaN	NaN	0	NaN	3806	3692	7499
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7501	24.485	NaN	4013.6	30	0	605.43	0.106				-1	KLHSGMKTY	9	65	540.7801219907562	1079.5456910483124	2	540.782470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_KLHSGM(Oxidation (M))KTY_	ENSG00000109906|ENST00000335953|ZBTB16;ENST00000541602.5_1_11:113934022-114057819:+|nuORF;nc|ENSG00000109906|Q05516-2|ZBTB16;ZBTB16|p.C434S|1|0.06|ENSG00000109906|chr11:114156368-114156368|T/A|missense_variant;ZBTB16|p.G433R|1|0.38|ENSG00000109906|chr11:114156365-114156365|G/A|missense_variant;ZBTB16|p.G496Wfs*27|1|0.28|ENSG00000109906|chr11:114242197-114242198|-/T|frameshift_variant	44.377184641726394	0.36891676396732553	3				NaN	NaN	0	NaN	3807	3692	7499
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7502	24.487	NaN	3692	30	0	432.35	0.106	+			42199	TAAETHYTY	9	64	528.7355411963119	1055.4565294594238	2	528.7352294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TAAETHYTY_	ENSG00000158773|ENST00000368021|USF1;ENST00000491629.5_1_1:161011414-161013065:-|nuORF;ENST00000529476.1_1_1:161011414-161013065:-|nuORF;nc|ENSG00000158773|P22415-2|USF1;USF1|p.G130Vfs*33|3|0.3|ENSG00000158773|chr1:161041734-161041734|C/-|frameshift_variant	87.75429964447693	0.0711966946989736	3				NaN	NaN	0	NaN	3808	3692	7499
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7503	24.489	NaN	3348.3	30	0	677.71	0.106	+			41776	SVSPGLYSK	9	60	469.25334626889173	936.4921396045835	2	469.7539367675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVSPGLYSK_	ENSG00000101311|ENST00000217289|FERMT1;nc|ENSG00000101311|Q9BQL6-2|FERMT1;nc|ENSG00000101311|Q9BQL6-4|FERMT1	42.86426827375447	0.38666266728046506	3				NaN	NaN	0	NaN	3809	3692	7499
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7504	24.491	NaN	2430.7	30	0	465.39	0.106			+	26312	LSVRTGPTTI	10	62	522.8060830412802	1043.5976131493603	2	522.8071899414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSVRTGPTTI_	REV__ENSG00000204956|ENST00000517417|PCDHGA1;REV__nc|ENSG00000204956|Q9Y5H4-2|PCDHGA1;REV__PCDHGA1|p.Q772Sfs*79|1|0.05|ENSG00000204956|chr5:141332994-141332994|C/-|frameshift_variant	56.632244143249146	0.3964695498866976	3				NaN	NaN	0	NaN	3810	3692	7499
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7505	24.492	NaN	2265.9	30	0	282.16	0.106	+			24608	LGRNGPTL	8	49	414.2408087293522	826.4670645255044	2	414.240966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LGRNGPTL_	ENSG00000100441|ENST00000553935|KHNYN	35.61828744233558	0.6843154725607303	3				NaN	NaN	0	NaN	3811	3692	7499
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7506	24.494	NaN	1475.9	30	0	141.06	0.036	+			26153	LSQKAEAQSL	10	55	537.7935671544602	NaN	0	537.79296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSQKAEAQSL_	ENST00000318948.6_1_21:16340842-16386743:-|nuORF	41.42661286455405	0.3598046802465243	3				NaN	NaN	0	NaN	3812	3692	7499
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7511	24.508	NaN	7097.1	30	0	511.06	0.214	+			49634	VYIEKNDKL	9	71	561.3140497130099	1120.6135464928198	2	561.3139038085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYIEKNDKL_	ENSG00000065361|ENST00000267101|ERBB3;ENST00000546884.1_1_12:56474084-56480451:+|nuORF;ENST00000549472.1_1_12:56480319-56481575:+|nuORF;ERBB3|p.A805Gfs*22|1|0.1|ENSG00000065361|chr12:56097177-56097178|-/G|frameshift_variant;ERBB3|p.A805Hfs*95|1|0.33|ENSG00000065361|chr12:56097178-56097178|G/-|frameshift_variant;ERBB3|p.R1080Vfs*22|1|0.14|ENSG00000065361|chr12:56101093-56101093|C/-|frameshift_variant;nc|ENSG00000065361|P21860-3|ERBB3;nc|ENSG00000065361|P21860-4|ERBB3	120.8684288430529	0.02067403653475984	3				NaN	NaN	0	NaN	3814	3695	7510
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7512	24.512	NaN	2038.8	30	0	444.93	0.106	+			28201	NASRDQVVY	9	56	526.2620080965771	1050.5094632599541	2	526.261962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NASRDQVVY_	ENSG00000167608|ENST00000619895|TMC4;nc|ENSG00000167608|Q7Z404-1|TMC4;nc|ENSG00000167608|Q7Z404|TMC4;TMC4|p.F240Lfs*221|1|0.42|ENSG00000167608|chr19:54168267-54168268|AA/-|frameshift_variant;TMC4|p.Q383Rfs*6|1|0.37|ENSG00000167608|chr19:54163872-54163872|G/-|frameshift_variant	35.61828744233558	0.47037581924408073	3				NaN	NaN	0	NaN	3815	3695	7510
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7513	24.514	NaN	4573.7	30	0	1707.9	0.106			+	1006	AEKKWARR	8	46	348.87317086686295	1043.5976832007889	3	348.8729248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEKKWARR_	REV__ENSG00000083097|ENST00000349129|DOP1A	27.882242232435846	0.7440473649773525	3				NaN	NaN	0	NaN	3816	3695	7510
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7514	24.516	NaN	4100.6	30	0	1224.9	0.106			+	-1	KCCLHRLLSVL	11	45	447.92133599847034	1340.742178595611	3	447.9209899902344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_KC(Carbamidomethyl (C))CLHRLLSVL_	REV__ENST00000380752.9_1_13:30127931-30169822:-|nuORF;REV__ENST00000450494.1_3_13:30127931-30160894:-|nuORF	20.030474535948922	0.7766990143561855	3				NaN	NaN	0	NaN	3817	3695	7510
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7515	24.518	NaN	1545.3	30	0	236.25	0.106	+			29145	NVAKTANKDHL	11	54	605.8310810724755	1209.647609211751	2	605.8305053710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NVAKTANKDHL_	ENSG00000100442|ENST00000396062|FKBP3;FKBP3|p.K118Rfs*45|1|0.05|ENSG00000100442|chr14:45121586-45121586|T/-|frameshift_variant	33.921630207806714	0.6339809607503234	3				NaN	NaN	0	NaN	3818	3695	7510
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7516	24.519	NaN	1868	30	0	799.02	0.106				-1	 	0	52	435.2458314889431	868.4771100446862	2	435.2456359863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3819	3695	7510
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7517	24.521	NaN	1148.5	30	0	144.64	0.037			+	50901	YGDLCQCRNC	10	47	587.7236021858281	1173.432651438456	2	587.7236938476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YGDLCQCRNC_	REV__ENSG00000139626|ENST00000267082|ITGB7	39.252832667884924	0.5560298534376815	3				NaN	NaN	0	NaN	3820	3695	7510
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7525	24.539	NaN	9186.8	30	0	1331.5	0.214	+			10733	FAEDGARTV	9	67	483.23854085876343	964.4625287843269	2	483.2378234863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FAEDGARTV_	ENSG00000157240|ENST00000287934|FZD1	101.45984612302182	0.0377122763612125	3				NaN	NaN	0	NaN	3825	3698	7524
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7526	24.543	NaN	4637.7	30	0	877.12	0.106	+			6051	AVMGNPVTR	9	60	472.75308360998497	943.49161428677	2	472.7525634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVMGNPVTR_	ENSG00000136021|ENST00000360820|SCYL2	66.42927471994793	0.16001998865088202	3				NaN	NaN	0	NaN	3826	3698	7524
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7527	24.545	NaN	4265.9	30	0	414.1	0.106			+	25062	LLLCFVPGH	9	68	499.7768473847405	997.539141836281	2	500.28173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LLLCFVPGH_	REV__ENST00000554399.1_1_14:52907374-53019172:-|nuORF	29.841539824830324	0.5243625958137083	3				NaN	NaN	0	NaN	3827	3698	7524
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7528	24.547	NaN	2414.6	30	0	224.43	0.106	+			27001	LYPVWKRG	8	65	509.7939131330834	1017.5732733329668	2	510.2978820800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LYPVWKRG_	ENSG00000136235|ENST00000258733|GPNMB;GPNMB|p.I383Nfs*9|1|0.21|ENSG00000136235|chr7:23266607-23266608|-/A|frameshift_variant;nc|ENSG00000136235|Q14956|GPNMB	28.2542754592877	0.7411748056684583	3				NaN	NaN	0	NaN	3828	3698	7524
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7529	24.548	NaN	2194.8	30	0	1201.6	0.106			+	49962	WAAVQVLP	8	41	442.2530687667527	NaN	0	442.2534484863281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_WAAVQVLP_	REV__AP1G2|p.L755Cfs*3|1|0.18|ENSG00000213983|chr14:23559844-23559844|G/-|frameshift_variant;REV__AP1G2|p.N690Tfs*6|1|0.41|ENSG00000213983|chr14:23560343-23560343|T/-|frameshift_variant;REV__ENSG00000166747|ENST00000299980|AP1G1;REV__ENSG00000213983|ENST00000397120|AP1G2;REV__ENST00000460049.6_1_14:24028960-24033376:-|nuORF;REV__ENST00000535852.6_1_14:24028960-24035624:-|nuORF;REV__ENST00000554982.5_1_14:24031495-24032684:-|nuORF;REV__ENST00000565642.5_1_16:71777395-71799448:-|nuORF;REV__nc|ENSG00000166747|O43747-2|AP1G1	25.450171626174864	1.7418937515398478	3				NaN	NaN	0	NaN	3829	3698	7524
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7530	24.55	NaN	1776.6	30	0	449.73	0.106			+	44166	TQQHAPIET	9	62	512.7578200648879	1023.5010871965759	2	512.7571411132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TQQHAPIET_	REV__ENSG00000205838|ENST00000505624|TTC23L;REV__ENST00000502782.5_1_5:34838982-34863053:+|nuORF;REV__ENST00000508377.5_1_5:34839347-34845796:+|nuORF;REV__nc|ENSG00000205838|Q6PF05-2|TTC23L;REV__nc|ENSG00000205838|Q6PF05-3|TTC23L	30.317721548370564	0.5199124245378496	3				NaN	NaN	0	NaN	3830	3698	7524
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7531	24.552	NaN	3942.3	30	0	469.1	0.036	+			37936	SPEELARKY	9	64	546.7879256005459	1091.5612982678917	2	546.7879638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SPEELARKY_	ENSG00000002726|ENST00000360937|AOC1;nc|ENSG00000002726|P19801-2|AOC1	68.84614121027924	0.14577793175421136	3				NaN	NaN	0	NaN	3831	3698	7524
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7537	24.567	NaN	12644	30	0	1867.5	0.214	+			29137	NVADLHEKY	9	80	544.7724367322795	1087.530320531359	2	544.772705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NVADLHEKY_	ENSG00000100804|ENST00000361611|PSMB5;ENST00000493471.2_1_14:23495300-23497005:-|nuORF;nc|ENSG00000100804|P28074-3|PSMB5	133.9934435666947	0.013297982075521412	3				NaN	NaN	0	NaN	3834	3701	7536
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7538	24.57	NaN	3849.2	30	0	378.92	0.106	+			36257	SENKAQVSL	9	71	488.2587106509181	974.5028683686362	2	488.2587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SENKAQVSL_	ENSG00000152818|ENST00000367545|UTRN;nc|ENSG00000152818|P46939-2|UTRN;UTRN|p.G3160*|1|0.03|ENSG00000152818|chr6:144821001-144821002|AG/-|frameshift_variant;UTRN|p.K1847Ffs*66|1|0.07|ENSG00000152818|chr6:144516945-144516946|-/TTTAA|frameshift_variant;UTRN|p.K951Rfs*32|2|0.22|ENSG00000152818|chr6:144461335-144461335|A/-|frameshift_variant;UTRN|p.L985Wfs*4|1|0.07|ENSG00000152818|chr6:144462753-144462754|-/GGGC|frameshift_variant;UTRN|p.R3003Pfs*5|1|0.27|ENSG00000152818|chr6:144793915-144793916|-/C|frameshift_variant;UTRN|p.T2422Hfs*35|1|0.47|ENSG00000152818|chr6:144557282-144557282|A/-|frameshift_variant	50.033510581677724	0.3025703251535696	3				NaN	NaN	0	NaN	3835	3701	7536
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7539	24.572	NaN	5548.7	30	0	1773.1	0.106			+	6070	AVMVPMHGVL	10	66	527.2826371794921	1052.550721425784	2	527.2828979492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVMVPMHGVL_	REV__ARHGEF10|p.E997Gfs*16|1|0.43|ENSG00000104728|chr8:1928644-1928644|A/-|frameshift_variant;REV__ARHGEF10|p.P976Rfs*8|1|0.14|ENSG00000104728|chr8:1928577-1928577|C/-|frameshift_variant;REV__ENSG00000104728|ENST00000349830|ARHGEF10;REV__ENST00000523711.5_1_8:1824717-1874701:+|nuORF;REV__nc|ENSG00000104728|O15013-4|ARHGEF10;REV__nc|ENSG00000104728|O15013-6|ARHGEF10;REV__nc|ENSG00000104728|O15013-7|ARHGEF10;REV__nc|ENSG00000104728|O15013|ARHGEF10	44.53106598305862	0.5073935772121767	3				NaN	NaN	0	NaN	3836	3701	7536
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7540	24.574	NaN	5160.2	30	0	896.03	0.106			+	41045	SVIEAGHY	8	64	438.216787748609	874.4190225640181	2	438.2164306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVIEAGHY_	REV__ENSG00000179021|ENST00000318887|C3orf38;REV__nc|nan|Q5JPI3-2|C3orf38	31.954861631926434	0.7126016770032289	3				NaN	NaN	0	NaN	3837	3701	7536
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7541	24.576	NaN	2063.7	30	0	250.53	0.106			+	30814	QEDPLAHL	8	50	461.7355152525523	921.4564775719047	2	461.7349853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QEDPLAHL_	REV__STAB2|p.A1792D|1|0.38|ENSG00000136011|chr12:103733097-103733097|C/A|missense_variant	29.14955571784316	0.7342621283720113	3				NaN	NaN	0	NaN	3838	3701	7536
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7542	24.578	NaN	4502.7	30	0	2243.8	0.106	+			15705	GVNRFCLSK	9	41	360.85905754221096	1079.555343226833	3	360.8587646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_GVNRFC(Carbamidomethyl (C))LSK_	ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;nc|ENSG00000185164|Q5JPE7-3|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2;NOMO1|p.P1102Hfs*42|1|0.36|ENSG00000103512|chr16:14886838-14886838|C/-|frameshift_variant	75.04331003522576	0.118981335847003	3				NaN	NaN	0	NaN	3839	3701	7536
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7543	24.579	NaN	1500.7	30	0	197.66	0.034	+			9281	EHLDLLSQ	8	56	477.74876565085043	953.4829783685009	2	477.7481384277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EHLDLLSQ_	CES5A|p.P323H|1|0.37|ENSG00000159398|chr16:55859635-55859635|G/T|missense_variant	32.81241826257853	0.7059802730411993	3				NaN	NaN	0	NaN	3840	3701	7536
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7552	24.602	NaN	6401.7	30	0	679.85	0.214	+			41723	SVSEVVVNR	9	63	494.77416670349743	987.5337804737949	2	494.7747802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSEVVVNR_	ENSG00000099821|ENST00000588649|POLRMT;ENST00000578759.1_1_17:60217316-60217976:-|nuORF	131.03138772384656	0.014687601201650916	3				NaN	NaN	0	NaN	3846	3704	7551
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7553	24.606	NaN	12667	30	0	5570.3	0.106			+	11355	FLGLEMCAGLL	11	58	389.5366491310107	1165.5881179932321	3	389.5360412597656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FLGLEMCAGLL_	REV__ENST00000571796.5_1_17:80869637-80887508:+|nuORF	45.02220120713402	0.4892240028381124	3				NaN	NaN	0	NaN	3847	3704	7551
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7554	24.608	NaN	7484.8	30	0	1126.7	0.106	+			12862	GEQKAYVLK	9	67	345.86613449022127	1034.576574070864	3	345.8656921386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEQKAYVLK_	ENSG00000175471|ENST00000515393|MCTP1;MCTP1|p.K875Rfs*4|3|0.53|ENSG00000175471|chr5:94714873-94714873|T/-|frameshift_variant;nc|ENSG00000175471|Q6DN14-2|MCTP1;nc|ENSG00000175471|Q6DN14-3|MCTP1;nc|ENSG00000175471|Q6DN14-4|MCTP1;nc|ENSG00000175471|Q6DN14-5|MCTP1	24.20275056022122	0.577060078256802	3				NaN	NaN	0	NaN	3848	3704	7551
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7555	24.61	NaN	1098.1	30	0	122.23	0.106			+	13235	GIKPKALE	8	46	428.2688297115963	854.5231064899926	2	428.2683410644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GIKPKALE_	REV__ENSG00000023734|ENST00000419869|STRAP;REV__nc|ENSG00000023734|Q9Y3F4-2|STRAP	31.954861631926434	0.7126016770032289	3				NaN	NaN	0	NaN	3849	3704	7551
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7556	24.611	NaN	2006.1	30	0	222.42	0.035			+	28673	NLTNGRRPA	9	52	499.7768473847405	997.539141836281	2	499.7758483886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NLTNGRRPA_	REV__ENSG00000143919|ENST00000378494|CAMKMT	27.882242232435846	0.5426732730940306	3				NaN	NaN	0	NaN	3850	3704	7551
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7557	24.612	NaN	2197.6	30	0	459.58	0.138	+			3121	ASGTLDVPK	9	52	444.24517793473274	NaN	0	444.2452392578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASGTLDVPK_	ENSG00000176473|ENST00000402312|WDR25;WDR25|p.H424Pfs*45|1|0.16|ENSG00000176473|chr14:100526032-100526033|-/T|frameshift_variant	85.16082228582465	0.053699699744190164	3				NaN	NaN	0	NaN	3851	3704	7551
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7563	24.63	NaN	20110	30	0	3238.7	0.214	+			42549	TASAVVQHM	9	78	472.23702287470996	942.45949281622	2	472.2365417480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TASAVVQHM_	ENSG00000115524|ENST00000335508|SF3B1	118.74307786436346	0.02196067127630568	3				NaN	NaN	0	NaN	3854	3707	7562
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7564	24.634	NaN	11262	30	0	2461.2	0.106				-1	 	0	78	532.7910786933022	1063.5676044534043	2	532.790771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3855	3707	7562
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7565	24.636	NaN	2824.3	30	0	515.7	0.106			+	31595	QLTKDKVQ	8	62	480.28015669411144	958.5457604550229	2	480.2795104980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QLTKDKVQ_	REV__ENSG00000104953|ENST00000246112|TLE6;REV__ENST00000474207.2_1_19:2984211-2987247:+|nuORF	52.936696900407355	0.5717071646657654	3				NaN	NaN	0	NaN	3856	3707	7562
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7566	24.637	NaN	2302	30	0	662	0.106	+			16032	HAVDVDSGNSY	11	58	582.2523064297412	1162.4900599262824	2	582.251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HAVDVDSGNSY_	ENSG00000141503|ENST00000355280|MINK1;MINK1|p.E1253Rfs*14|1|0.42|ENSG00000141503|chr17:4896565-4896565|G/-|frameshift_variant;MINK1|p.F1308Lfs*15|1|0.19|ENSG00000141503|chr17:4897207-4897207|T/-|frameshift_variant;nc|ENSG00000141503|Q8N4C8-2|MINK1;nc|ENSG00000141503|Q8N4C8-3|MINK1;nc|ENSG00000141503|Q8N4C8-4|MINK1;nc|ENSG00000141503|Q8N4C8-5|MINK1	61.691277971877994	0.30835813808799384	3				NaN	NaN	0	NaN	3857	3707	7562
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7567	24.639	NaN	3375.4	30	0	737.02	0.106	+			36686	SGPQNASSL	9	54	430.7092064643588	859.4038599955176	2	430.70892333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SGPQNASSL_	ENSG00000153113|ENST00000675179|CAST;nc|ENSG00000153113|P20810-10|CAST;nc|ENSG00000153113|P20810-2|CAST;nc|ENSG00000153113|P20810-3|CAST;nc|ENSG00000153113|P20810-4|CAST;nc|ENSG00000153113|P20810-5|CAST;nc|ENSG00000153113|P20810-7|CAST;nc|ENSG00000153113|P20810-8|CAST;nc|ENSG00000153113|P20810-9|CAST;nc|ENSG00000153113|P20810|CAST	85.16082228582465	0.07850854922700509	3				NaN	NaN	0	NaN	3858	3707	7562
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7568	24.641	NaN	5143	30	0	1508.2	0.106			+	-1	VGMVLKKKN	9	44	344.87956631755816	1031.6168695528745	3	344.8792724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_VGM(Oxidation (M))VLKKKN_	REV__ENST00000515007.6_1_5:77783670-77783811:-|nuORF	27.882242232435846	0.5426732730940306	3				NaN	NaN	0	NaN	3859	3707	7562
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7569	24.643	NaN	2200.4	30	0	226.45	0.035				-1	LESSELVVC	9	59	518.2538035178562	1034.4930541025124	2	518.25390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_LESSELVVC(Carbamidomethyl (C))_	ENST00000374586.7_1_9:111782502-111782577:-|nuORF	37.15910966729921	0.4535818937225704	3				NaN	NaN	0	NaN	3860	3707	7562
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7576	24.66	NaN	4193.5	30	0	631.54	0.214	+			8547	EAVKQYSSY	9	67	537.7596685943695	1073.5047842555389	2	537.7591552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EAVKQYSSY_	ENSG00000170525|ENST00000379775|PFKFB3;nc|ENSG00000170525|Q16875-2|PFKFB3;nc|ENSG00000170525|Q16875-3|PFKFB3;nc|ENSG00000170525|Q16875-4|PFKFB3	143.8867514904718	0.008656634767784652	3				NaN	NaN	0	NaN	3864	3710	7575
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7577	24.663	NaN	3064.4	30	0	797.62	0.106	+			2182	ALMMRHRAL	9	63	549.804774629046	1097.594996324892	2	549.80517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ALMMRHRAL_	LDOC1|p.L13M|1|0.24|ENSG00000182195|chrX:141176985-141176985|G/T|missense_variant	40.77816245573522	0.41113185337114944	3				NaN	NaN	0	NaN	3865	3710	7575
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7578	24.665	NaN	3561.7	30	0	585.95	0.106	+			11852	FTAPSTVGK	9	56	454.2481629567712	906.4817729803424	2	454.2475891113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FTAPSTVGK_	ENSG00000140694|ENST00000437198|PARN;nc|ENSG00000140694|O95453-2|PARN;nc|ENSG00000140694|O95453-3|PARN;nc|ENSG00000140694|O95453-4|PARN	62.107414245175825	0.1960472003779324	3				NaN	NaN	0	NaN	3866	3710	7575
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7579	24.667	NaN	4752.9	30	0	909.36	0.106	+			15121	GTQTVFPSK	9	56	482.7589457318176	963.5033385304353	2	482.7586975097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTQTVFPSK_	ENSG00000156463|ENST00000359120|SH3RF2;ENST00000511705.1_1_5:145435703-145442261:+|nuORF;nc|ENSG00000156463|Q8TEC5-2|SH3RF2;nc|ENSG00000156463|Q8TEC5-3|SH3RF2	41.42661286455405	0.403525789677298	3				NaN	NaN	0	NaN	3867	3710	7575
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7580	24.669	NaN	1799.4	30	0	337.9	0.106	+			34270	RTISSDAVLQR	11	60	623.3496974689162	1244.6848420046324	2	623.349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RTISSDAVLQR_	ENSG00000073350|ENST00000392550|LLGL2;ENST00000545227.6_1_17:73554011-73570984:+|nuORF;nc|ENSG00000073350|Q6P1M3-2|LLGL2;nc|ENSG00000073350|Q6P1M3-3|LLGL2	54.00501255817391	0.3769686337559935	3				NaN	NaN	0	NaN	3868	3710	7575
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7581	24.671	NaN	6613.9	30	0	1572.1	0.106				-1	 	0	59	404.7197408441734	807.4249287551468	2	404.7192077636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3869	3710	7575
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7582	24.672	NaN	3079.5	30	0	622.7	0.035			+	9562	ELGAVNPNAM	10	68	508.24855436693946	1014.4825558006789	2	508.2472839355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ELGAVNPNAM_	REV__ENSG00000127603|ENST00000564288|MACF1;REV__MACF1|p.A5223Lfs*8|1|0.21|ENSG00000127603|chr1:39388486-39388486|G/-|frameshift_variant;REV__MACF1|p.N4824Kfs*19|1|0.33|ENSG00000127603|chr1:39387292-39387293|-/A|frameshift_variant;REV__MACF1|p.T4896Lfs*29|1|0.27|ENSG00000127603|chr1:39387507-39387507|A/-|frameshift_variant;REV__nc|ENSG00000127603|Q9UPN3-5|MACF1;REV__nc|ENSG00000127603|Q9UPN3|MACF1	68.78682469695295	0.28723163847957256	3				NaN	NaN	0	NaN	3870	3710	7575
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7589	24.689	NaN	19182	30	0	1549.7	0.214	+			23596	LANGQTKVL	9	73	472.2826205379136	942.5506881426272	2	472.2818298339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LANGQTKVL_	ENSG00000265972|ENST00000582401|TXNIP;ENST00000488537.1_1_1:145440216-145440639:+|nuORF;nc|ENSG00000265972|Q9H3M7-2|TXNIP	59.93077597824379	0.21419174904018318	3				NaN	NaN	0	NaN	3874	3713	7588
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7590	24.693	NaN	3208.4	30	0	527.09	0.106	+			16587	HGFGNVHAY	9	66	501.2334596834202	1000.4523664336405	2	501.2330322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HGFGNVHAY_	ENSG00000144354|ENST00000306721|CDCA7;nc|ENSG00000144354|Q9BWT1-3|CDCA7;nc|ENSG00000144354|Q9BWT1-5|CDCA7;nc|ENSG00000144354|Q9BWT1-6|CDCA7;nc|ENSG00000144354|Q9BWT1|CDCA7	97.47269410471826	0.04379738608259218	3				NaN	NaN	0	NaN	3875	3713	7588
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7591	24.695	NaN	1677.1	30	0	340.63	0.106	+			48977	VVGGLDIHK	9	52	469.27697788775384	936.5394028423077	2	469.2766418457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVGGLDIHK_	ENSG00000221823|ENST00000234310|PPP3R1	87.69643885390035	0.07135982304947239	3				NaN	NaN	0	NaN	3876	3713	7588
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7592	24.696	NaN	1995.6	30	0	230.33	0.106	+			33776	RQAELAQWQK	10	63	629.3391684131149	1256.6637838930296	2	629.3386840820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RQAELAQWQK_	ENSG00000183978|ENST00000328434|COA3	60.69067153575145	0.3595586438680871	3				NaN	NaN	0	NaN	3877	3713	7588
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7593	24.698	NaN	1678.2	30	0	325.33	0.106	+			44429	TSLSVSTPK	9	53	460.2585827535404	918.5026125738808	2	460.2579650878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TSLSVSTPK_	ENSG00000136021|ENST00000360820|SCYL2;ENST00000392253.2_1_2:202275598-202275970:-|nuORF	49.536043120802724	0.308405419312776	3				NaN	NaN	0	NaN	3878	3713	7588
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7594	24.7	NaN	3577.5	30	0	385.48	0.106				-1	DRILCDVPCSG	11	53	412.1905217886929	1233.5497359662786	3	412.1896057128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_DRILCDVPC(Carbamidomethyl (C))SG_	ENSG00000037474|ENST00000264670|NSUN2;nc|ENSG00000037474|Q08J23-2|NSUN2;nc|ENSG00000037474|Q08J23-3|NSUN2;NSUN2|p.F423Lfs*6|1|0.21|ENSG00000037474|chr5:6609880-6609880|A/-|frameshift_variant;NSUN2|p.S339Vfs*17|1|0.16|ENSG00000037474|chr5:6616733-6616733|T/-|frameshift_variant;NSUN2|p.Y537Mfs*10|1|0.1|ENSG00000037474|chr5:6605401-6605401|A/-|frameshift_variant	32.03412808689991	0.6537793186749145	3				NaN	NaN	0	NaN	3879	3713	7588
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7595	24.702	NaN	1540.5	30	0	268.99	0.035	+			10587	EYKKAKLQ	8	59	504.2979773438588	NaN	0	504.2978210449219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EYKKAKLQ_	tr|U7SGL3|U7SGL3_FUSNUOutermembraneeffluxproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02229PE=3SV=1	37.15910966729921	1.7418937515398478	3				NaN	NaN	0	NaN	3880	3713	7588
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7601	24.717	NaN	10563	30	0	2973.1	0.215	+			15122	GTQTVFPSK	9	77	482.7589457318176	963.5033385304353	2	482.75836181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTQTVFPSK_	ENSG00000156463|ENST00000359120|SH3RF2;ENST00000511705.1_1_5:145435703-145442261:+|nuORF;nc|ENSG00000156463|Q8TEC5-2|SH3RF2;nc|ENSG00000156463|Q8TEC5-3|SH3RF2	79.48907831485694	0.09975780661107167	3				NaN	NaN	0	NaN	3883	3716	7600
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7602	24.72	NaN	3306	30	0	305.26	0.106	+			34305	RTLSDYNIQK	10	72	619.330905555381	1236.647258177562	2	619.3306884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RTLSDYNIQK_	ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000392399.3_1_2:137087013-137087097:-|nuORF;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000597285.1_1_19:7730614-7730836:+|nuORF;UBB|p.D191Tfs*35|2|0.18|ENSG00000170315|chr17:16382471-16382471|C/-|frameshift_variant;UBB|p.D191Tfs*35|2|0.18|ENSG00000170315|chr17:16382471-16382471|C/-|frameshift_variant	88.1336951990783	0.14175885391278442	3				NaN	NaN	0	NaN	3884	3716	7600
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7603	24.722	NaN	3500.7	30	0	1070.9	0.106			+	17846	IFNLLPEVF	9	67	546.3090886973298	NaN	0	546.3091430664062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IFNLLPEVF_	REV__ENSG00000239857|ENST00000265857|GET4;REV__ENST00000464468.1_1_7:931948-933548:+|nuORF;REV__nc|ENSG00000239857|Q7L5D6-2|GET4	37.81151784470057	0.28666463014928195	3				NaN	NaN	0	NaN	3885	3716	7600
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7604	24.724	NaN	1377.4	30	0	193.96	0.106	+			13364	GLAHHRLSH	9	57	514.2821715206987	1026.5497901081974	2	514.2833862304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GLAHHRLSH_	ENSG00000174586|ENST00000311044|ZNF497	35.15202426646627	0.4747332964206883	3				NaN	NaN	0	NaN	3886	3716	7600
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7605	24.726	NaN	690.89	30	0	83.956	0.106	+			50263	WQVPKEADDT	10	42	594.7808198209368	1187.5470867086735	2	594.7798461914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_WQVPKEADDT_	ENSG00000129566|ENST00000262715|TEP1;ENST00000557314.5_1_14:20839728-20850189:-|nuORF;nc|ENSG00000129566|Q99973-2|TEP1	18.262085536374414	0.7236521404371882	3				NaN	NaN	0	NaN	3887	3716	7600
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7606	24.728	NaN	1393.3	30	0	250.05	0.106				-1	RGCLGIGR	8	44	444.74379714860845	887.4730413640169	2	444.7427673339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_RGC(Carbamidomethyl (C))LGIGR_	ENSG00000274523|ENST00000610322|RCC1L;ENST00000420642.1_7:74765936-74789271:+|nuORF;nc|ENSG00000274523|Q96I51-3|RCC1L	55.50420428727701	0.5462892107279674	3				NaN	NaN	0	NaN	3888	3716	7600
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7607	24.729	NaN	1817.3	30	0	315.53	0.037			+	-1	AGMNAQLRKL	10	37	373.2098085112993	NaN	0	373.2101135253906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_AGM(Oxidation (M))NAQLRKL_	REV__ENSG00000108799|ENST00000428826|EZH1;REV__ENST00000585912.5_1_17:40855746-40880959:-|nuORF;REV__ENST00000586103.5_1_17:40855746-40880959:-|nuORF;REV__ENST00000590082.1_1_17:40876593-40880959:-|nuORF;REV__EZH1|p.R680Qfs*46|1|0.05|ENSG00000108799|chr17:42703798-42703799|CC/-|frameshift_variant;REV__nc|ENSG00000108799|Q92800-2|EZH1;REV__nc|ENSG00000108799|Q92800-3|EZH1	22.579656572578934	0.4201028297492154	3				NaN	NaN	0	NaN	3889	3716	7600
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7612	24.744	NaN	8060.2	30	0	2101.8	0.214	+			39937	STMGYMAAK	9	61	480.2199203412429	958.4252877492859	2	480.2195739746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STMGYMAAK_	ENSG00000080824|ENST00000216281|HSP90AA1;ENST00000436135.1_1_1:158495283-158495625:+|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1	113.41158876095287	0.025516849225023126	3				NaN	NaN	0	NaN	3891	3719	7611
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7613	24.748	NaN	4306.6	30	0	774.02	0.106				-1	 	0	69	495.7543265854314	989.4941002376628	2	495.7537536621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3892	3719	7611
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7614	24.75	NaN	2114	30	0	483.68	0.106				-1	KVIQLIMF	8	34	336.5361191269536	1006.586527981061	3	336.53436279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_KVIQLIM(Oxidation (M))F_	ENST00000551440.1_1_12:100594629-100598862:+|nuORF	18.324413293986947	0.7971860551947066	3				NaN	NaN	0	NaN	3893	3719	7611
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7615	24.751	NaN	1318.4	30	0	74.656	0.106				-1	SCTLYLQRAC	10	51	607.7865563407967	1213.5585597483932	2	607.7865600585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_SCTLYLQRAC(Carbamidomethyl (C))_	ENST00000545314.5_1_1:65696457-65696658:+|nuORF	26.69291269510374	0.6618461711292317	3				NaN	NaN	0	NaN	3894	3719	7611
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7616	24.753	NaN	2367.8	30	0	265.07	0.035			+	37547	SLLWFGALE	9	68	518.279661141582	1034.5447693499639	2	518.2799072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SLLWFGALE_	REV__ENSG00000186889|ENST00000335390|TMEM17;REV__ENST00000479763.5_1_2:62728346-62728628:-|nuORF	44.116797842482775	0.37197099687881774	3				NaN	NaN	0	NaN	3895	3719	7611
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7621	24.768	NaN	1330.1	30	0	651.21	0.214			+	44038	TPPLASGAH	9	41	425.72484278136204	849.4351326295241	2	425.7241516113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TPPLASGAH_	REV__ENST00000450472.1_1_21:30595147-30595570:+|nuORF	38.80614096846853	0.43426287593479557	3				NaN	NaN	0	NaN	3897	3722	7620
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7622	24.771	NaN	2475.4	30	0	822.2	0.037			+	-1	LGECIRPILG	10	45	376.5457056356643	1126.615287507193	3	376.5456237792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LGEC(Carbamidomethyl (C))IRPILG_	REV__ENSG00000089177|ENST00000354981|KIF16B;REV__KIF16B|p.F1272Sfs*3|1|0.36|ENSG00000089177|chr20:16273392-16273392|A/-|frameshift_variant;REV__KIF16B|p.N357Tfs*24|1|0.09|ENSG00000089177|chr20:16504478-16504478|T/-|frameshift_variant;REV__nc|ENSG00000089177|Q96L93-2|KIF16B;REV__nc|ENSG00000089177|Q96L93-4|KIF16B;REV__nc|ENSG00000089177|Q96L93-5|KIF16B;REV__nc|ENSG00000089177|Q96L93-6|KIF16B	30.317721548370564	0.6322445173429027	3				NaN	NaN	0	NaN	3898	3722	7620
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7629	24.788	NaN	5813.2	30	0	578.1	0.214			+	20485	KEYPTNAGGL	10	71	525.2665904655837	1048.5186279979673	2	525.2669677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEYPTNAGGL_	REV__ENSG00000077152|ENST00000646651|UBE2T;REV__ENST00000487227.5_1_1:202302298-202304891:-|nuORF;REV__UBE2T|p.F51Lfs*3|1|0.15|ENSG00000077152|chr1:202335015-202335015|A/-|frameshift_variant;REV__UBE2T|p.P62Nfs*48|1|0.11|ENSG00000077152|chr1:202333551-202333552|-/TT|frameshift_variant	64.20726635412375	0.3275756395432415	3				NaN	NaN	0	NaN	3902	3725	7628
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7630	24.792	NaN	3754.2	30	0	1477.5	0.106			+	48623	VTSGMEQIK	9	59	504.75547519987805	1007.4963974665561	2	504.7552795410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_VTSGM(Oxidation (M))EQIK_	REV__CCDC150|p.E447Sfs*3|1|0.16|ENSG00000144395|chr2:196676625-196676625|A/-|frameshift_variant;REV__ENSG00000144395|ENST00000389175|CCDC150;REV__ENST00000471546.5_1_2:197504460-197531652:+|nuORF	54.776311868738084	0.25715957988447635	3				NaN	NaN	0	NaN	3903	3725	7628
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7631	24.794	NaN	2226.7	30	0	292.99	0.106	+			43037	TELAGHAL	8	50	406.2197129084632	810.4248728837264	2	406.2192687988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TELAGHAL_	EFS|p.Q548H|1|0.16|ENSG00000100842|chr14:23357268-23357268|C/A|missense_variant	57.452649787351945	0.526999880452039	3				NaN	NaN	0	NaN	3904	3725	7628
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7632	24.796	NaN	7978.4	30	0	3021.6	0.106	+			39419	STDRLTVLK	9	61	344.87352191221487	1031.5987363368447	3	344.873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STDRLTVLK_	ENSG00000138670|ENST00000264400|RASGEF1B;nc|ENSG00000138670|Q0VAM2-2|RASGEF1B;nc|ENSG00000138670|Q0VAM2-3|RASGEF1B;RASGEF1B|p.T323Lfs*5|1|0.3|ENSG00000138670|chr4:81442338-81442338|T/-|frameshift_variant	56.632244143249146	0.24168844994051353	3				NaN	NaN	0	NaN	3905	3725	7628
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7633	24.797	NaN	1602.7	30	0	227.89	0.106			+	-1	CAPKGCFL	8	47	448.21156541712315	894.4085779010463	2	448.21099853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_CAPKGC(Carbamidomethyl (C))FL_	REV__ENSG00000136449|ENST00000323776|MYCBPAP;REV__ENST00000470609.5_1_17:48585906-48599496:+|nuORF;REV__nc|ENSG00000136449|Q8TBZ2|MYCBPAP	29.841539824830324	0.7289191502596711	3				NaN	NaN	0	NaN	3906	3725	7628
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7634	24.799	NaN	1947.2	30	0	262.8	0.106			+	38728	SSLIEWGL	8	55	452.74073214421645	903.4669113552329	2	452.7403869628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSLIEWGL_	REV__ADGRV1|p.A1698Nfs*28|1|0.13|ENSG00000164199|chr5:90674214-90674215|-/GAACATATATATTC|frameshift_variant;REV__ADGRV1|p.F5465Lfs*13|1|0.26|ENSG00000164199|chr5:90828964-90828964|T/-|frameshift_variant;REV__ADGRV1|p.G3807Dfs*10|1|0.16|ENSG00000164199|chr5:90755021-90755021|A/-|frameshift_variant;REV__ADGRV1|p.L4664Cfs*23|1|0.28|ENSG00000164199|chr5:90789790-90789790|A/-|frameshift_variant;REV__ADGRV1|p.N3627Ifs*14|1|0.34|ENSG00000164199|chr5:90745697-90745697|A/-|frameshift_variant;REV__ADGRV1|p.S1982Ffs*2|1|0.3|ENSG00000164199|chr5:90683859-90683860|-/T|frameshift_variant;REV__ADGRV1|p.S2670Rfs*9|1|0.05|ENSG00000164199|chr5:90697000-90697001|-/GCCCAAAATAATT|frameshift_variant;REV__ADGRV1|p.T5738Pfs*48|1|0.19|ENSG00000164199|chr5:90853288-90853288|A/-|frameshift_variant;REV__ADGRV1|p.Y1610Tfs*36|1|0.42|ENSG00000164199|chr5:90672616-90672616|T/-|frameshift_variant;REV__ADGRV1|p.Y5091Tfs*7|2|0.25|ENSG00000164199|chr5:90810525-90810525|T/-|frameshift_variant;REV__ENSG00000164199|ENST00000405460|ADGRV1;REV__ENST00000504142.2_2_5:89924394-89949789:+|nuORF;REV__nc|ENSG00000164199|Q8WXG9-3|ADGRV1;REV__nc|ENSG00000164199|Q8WXG9-4|ADGRV1	57.81127852772723	0.5234495074909924	3				NaN	NaN	0	NaN	3907	3725	7628
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7635	24.801	NaN	2326.4	30	0	389.67	0.033	+			20300	KEPPAPAQ	8	46	419.2273839092307	836.4402148852614	2	419.2265930175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KEPPAPAQ_	ENSG00000134851|ENST00000381334|TMEM165;ENST00000514070.1_1_4:56262425-56263321:+|nuORF;TMEM165|p.G171Wfs*3|1|0.09|ENSG00000134851|chr4:55417143-55417144|-/T|frameshift_variant;TMEM165|p.L309Wfs*10|1|0.25|ENSG00000134851|chr4:55425397-55425397|T/-|frameshift_variant	64.20726635412375	0.4601301477144759	3				NaN	NaN	0	NaN	3908	3725	7628
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7640	24.816	NaN	5152.7	30	0	1516.4	0.214	+			46479	VETGVLKPG	9	58	450.263572538053	898.512592142906	2	450.2632751464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VETGVLKPG_	ENSG00000156508|ENST00000309268|EEF1A1;ENST00000436459.2_1_9:135895553-135896258:+|nuORF;ENST00000450915.1_1_7:88268512-88269193:+|nuORF;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	95.81516180277367	0.04847050768394289	3				NaN	NaN	0	NaN	3910	3728	7639
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7641	24.819	NaN	2447.3	30	0	295.97	0.106			+	37963	SPHASTGFI	9	53	458.7299101899581	915.4452674467162	2	458.7293395996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SPHASTGFI_	REV__ENSG00000158008|ENST00000374280|EXTL1;REV__ENST00000484339.1_1_1:26349695-26357853:+|nuORF;REV__EXTL1|p.P388Qfs*35|1|0.43|ENSG00000158008|chr1:26031188-26031188|C/-|frameshift_variant	57.81127852772723	0.2318599694398087	3				NaN	NaN	0	NaN	3911	3728	7639
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7642	24.821	NaN	4034.3	30	0	421.09	0.106	+			50232	WPEISSSH	8	66	471.7195326711914	941.4245124091829	2	471.71875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_WPEISSSH_	ENSG00000147854|ENST00000276893|UHRF2;ENST00000431339.1_1_X:73326627-73327404:+|nuORF	33.51558372728122	0.7005509609380386	3				NaN	NaN	0	NaN	3912	3728	7639
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7643	24.823	NaN	2350.8	30	0	826.45	0.106	+			16943	HPNNVVSVKY	10	62	578.8095161270436	1155.604479320887	2	578.8094482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HPNNVVSVKY_	ENSG00000139116|ENST00000361418|KIF21A;ENST00000547733.1_1_12:39688228-39705384:-|nuORF;KIF21A|p.P1541Lfs*6|1|0.27|ENSG00000139116|chr12:39303074-39303074|G/-|frameshift_variant;nc|ENSG00000139116|Q7Z4S6-2|KIF21A;nc|ENSG00000139116|Q7Z4S6-3|KIF21A;nc|ENSG00000139116|Q7Z4S6-4|KIF21A;nc|ENSG00000139116|Q7Z4S6-5|KIF21A;nc|ENSG00000139116|Q7Z4S6-6|KIF21A	90.60085204095205	0.12763388345653318	3				NaN	NaN	0	NaN	3913	3728	7639
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7644	24.825	NaN	954.49	30	0	118.54	0.106				-1	KCSITCGKGM	10	45	542.7487661740232	NaN	0	542.7489013671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_KCSITC(Carbamidomethyl (C))GKGM_	ENSG00000145808|ENST00000274487|ADAMTS19;nc|ENSG00000145808|Q8TE59|ADAMTS19	31.529811441608018	0.39664753963064203	3				NaN	NaN	0	NaN	3914	3728	7639
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7645	24.827	NaN	1171.2	30	0	118.8	0.106	+			47676	VSDSGAHVL	9	48	442.72732453649866	883.4400961397973	2	442.7268371582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VSDSGAHVL_	ENSG00000064102|ENST00000261191|INTS13	63.30626980617807	0.18605348971131092	3				NaN	NaN	0	NaN	3915	3728	7639
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7646	24.828	NaN	1919.8	30	0	152.44	0.036	+			37888	SNYNLPMHK	9	62	552.2690934558876	1102.5236339785752	2	552.2694702148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SNYNLPMHK_	ENSG00000174444|ENST00000307961|RPL4;ENST00000422486.1_1_3:185135660-185136437:-|nuORF;ENST00000567229.5_1_15:66791747-66793486:-|nuORF	45.02220120713402	0.3613509778819777	3				NaN	NaN	0	NaN	3916	3728	7639
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7657	24.853	NaN	36436	30	0	16140	0.214				-1	 	0	51	322.1938439215438	642.3731349098877	2	322.19354248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3924	3731	7656
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7658	24.856	NaN	9997.3	30	0	2052.4	0.106	+			9651	ELSKAKEII	9	67	344.209842742047	1029.607698826341	3	344.20941162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ELSKAKEII_	DST|p.K5076Nfs*24|1|0.31|ENSG00000151914|chr6:56472218-56472218|T/-|frameshift_variant;DST|p.T4428Nfs*23|1|0.12|ENSG00000151914|chr6:56497896-56497897|-/T|frameshift_variant;ENSG00000151914|ENST00000680361|DST;nc|ENSG00000151914|Q03001-9|DST;nc|ENSG00000151914|Q03001|DST	69.6276240434122	0.14239879520340665	3				NaN	NaN	0	NaN	3925	3731	7656
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7659	24.858	NaN	6116.8	30	0	833.17	0.106	+			24084	LEKGKETLL	9	65	515.8111077794164	1029.6076626256327	2	515.8110961914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LEKGKETLL_	ENSG00000204592|ENST00000376630|HLA-E	128.60217544463768	0.015992218256422188	3				NaN	NaN	0	NaN	3926	3731	7656
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7660	24.86	NaN	2943.5	30	0	526.83	0.106	+			40174	STQSLSLQR	9	60	510.2791125331348	1018.5436721330697	2	510.2785949707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STQSLSLQR_	ENSG00000187479|ENST00000617612|C11orf96;nc|nan|Q7Z7L8|C11orf96	56.632244143249146	0.24168844994051353	3				NaN	NaN	0	NaN	3927	3731	7656
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7661	24.862	NaN	4025.3	30	0	1208.7	0.106	+			47923	VSLSRGPLSPL	11	51	375.89258885063543	1124.6559371521064	3	375.8921813964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSLSRGPLSPL_	ZNHIT2|p.V207L|1|0.56|ENSG00000174276|chr11:65117035-65117035|C/G|missense_variant	26.063383197487333	0.7164075632144343	3				NaN	NaN	0	NaN	3928	3731	7656
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7662	24.864	NaN	2593.4	30	0	546.4	0.032	+			16927	HPLSTPAS	8	54	405.21111595836516	808.4076789835303	2	405.2113342285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HPLSTPAS_	ENSG00000166825|ENST00000300060|ANPEP	44.53106598305862	0.628196326904373	3				NaN	NaN	0	NaN	3929	3731	7656
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7663	24.864	NaN	1146.5	30	0	77.04	0.139			+	8027	DTRLGFNQ	8	48	475.738908654798	NaN	0	475.739013671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DTRLGFNQ_	REV__ENSG00000139613|ENST00000550164|SMARCC2;REV__ENSG00000173473|ENST00000254480|SMARCC1;REV__ENST00000483847.1_1_3:47712102-47719818:-|nuORF;REV__ENST00000549209.5_1_12:56565201-56568439:-|nuORF;REV__ENST00000552931.1_1_12:56566100-56568508:-|nuORF;REV__nc|ENSG00000139613|Q8TAQ2-2|SMARCC2;REV__nc|ENSG00000139613|Q8TAQ2-3|SMARCC2;REV__nc|ENSG00000139613|Q8TAQ2|SMARCC2;REV__SMARCC1|p.N815Kfs*2|1|0.32|ENSG00000173473|chr3:47636068-47636069|-/T|frameshift_variant	37.15910966729921	1.7418937515398478	3				NaN	NaN	0	NaN	3930	3731	7656
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7671	24.886	NaN	40612	30	0	21059	0.214				-1	 	0	67	435.2458314889431	868.4771100446862	2	435.2454833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3935	3734	7670
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7672	24.89	NaN	11141	30	0	996.7	0.106	+			35892	SEEVVSREV	9	75	517.26179130809	1032.5090296829799	2	517.2616577148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEEVVSREV_	ENSG00000160789|ENST00000368300|LMNA;nc|ENSG00000160789|P02545-2|LMNA;nc|ENSG00000160789|P02545-3|LMNA;nc|ENSG00000160789|P02545-6|LMNA	114.8945686534367	0.024290463251177924	3				NaN	NaN	0	NaN	3936	3734	7670
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7673	24.891	NaN	6588	30	0	1371	0.106	+			46080	VCSRASSPI	9	67	460.23694460939686	918.4593362855937	2	460.2366027832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VCSRASSPI_	nc|ENSG00000242372|P56537-2|EIF6	76.7741389293348	0.11149722112137898	3				NaN	NaN	0	NaN	3937	3734	7670
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7674	24.893	NaN	5814.5	30	0	644.46	0.106	+			33962	RSDTPLIYK	9	68	546.8068320393957	1091.5991111455912	2	546.807373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RSDTPLIYK_	ENSG00000196305|ENST00000443024|IARS1	66.96192283764107	0.15557981141143568	3				NaN	NaN	0	NaN	3938	3734	7670
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7675	24.895	NaN	3097.8	30	0	371.56	0.106	+			50383	YAACQSHAF	9	70	527.7246480941938	1053.4347432551874	2	528.2262573242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_YAAC(Carbamidomethyl (C))QSHAF_	ENSG00000244187|ENST00000290079|TMEM141;ENST00000465017.5_1_9:139685862-139687281:+|nuORF;ENST00000489739.1_1_9:139685858-139686514:+|nuORF	98.62937762414208	0.04060045538121712	3				NaN	NaN	0	NaN	3939	3734	7670
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7676	24.897	NaN	3089.7	30	0	566.03	0.106	+			14131	GSLSIATEK	9	56	453.2505839957898	NaN	0	453.2505798339844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GSLSIATEK_	ENSG00000110077|ENST00000528851|MS4A6A;ENST00000525549.5_1_11:59945684-59950490:-|nuORF;ENST00000529906.5_1_11:59944867-59947426:-|nuORF;ENST00000530179.1_1_11:59945684-59950490:-|nuORF;MS4A6A|p.T185Sfs*29|1|0.24|ENSG00000110077|chr11:60173125-60173126|GT/-|frameshift_variant;nc|ENSG00000110077|Q9H2W1-3|MS4A6A;nc|ENSG00000110077|Q9H2W1-5|MS4A6A;nc|ENSG00000110077|Q9H2W1|MS4A6A	70.8162118820467	0.10318768208603292	3				NaN	NaN	0	NaN	3940	3734	7670
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7677	24.899	NaN	2327.1	30	0	359.64	0.036	+			7727	DLSSLKHSY	9	55	525.2665904655837	1048.5186279979673	2	525.2667846679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DLSSLKHSY_	BSN|p.P3390Hfs*97|1|0.22|ENSG00000164061|chr3:49662009-49662009|C/-|frameshift_variant;BSN|p.P3790Hfs*5|1|0.5|ENSG00000164061|chr3:49663523-49663523|C/-|frameshift_variant;ENSG00000164061|ENST00000296452|BSN	29.14955571784316	0.5308295550522326	3				NaN	NaN	0	NaN	3941	3734	7670
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7686	24.919	NaN	3957	30	0	573.56	0.214	+			8869	EERPPAQAL	9	66	505.76702602035226	1009.5194991075045	2	505.7670593261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EERPPAQAL_	ENSG00000047849|ENST00000683076|MAP4;MAP4|p.R919Gfs*14|1|0.44|ENSG00000047849|chr3:47870917-47870917|G/-|frameshift_variant;MAP4|p.T960Qfs*35|1|0.3|ENSG00000047849|chr3:47869309-47869309|T/-|frameshift_variant;MAP4|p.V999*|1|0.25|ENSG00000047849|chr3:47867318-47867318|T/-|frameshift_variant;nc|ENSG00000047849|P27816-2|MAP4;nc|ENSG00000047849|P27816-5|MAP4;nc|ENSG00000047849|P27816-6|MAP4;nc|ENSG00000047849|P27816|MAP4	116.90359126533652	0.02307425081617795	3				NaN	NaN	0	NaN	3947	3737	7685
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7687	24.923	NaN	2375.7	30	0	239.57	0.106			+	-1	SVAEDYSPLM	10	63	564.2489674010136	1126.483381868827	2	564.2489013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_SVAEDYSPLM(Oxidation (M))_	REV__ENSG00000143502|ENST00000366878|SUSD4;REV__nc|ENSG00000143502|Q5VX71-2|SUSD4;REV__SUSD4|p.P412Qfs*51|2|0.24|ENSG00000143502|chr1:223223458-223223458|G/-|frameshift_variant	42.396135135203025	0.5270658956260207	3				NaN	NaN	0	NaN	3948	3737	7685
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7688	24.925	NaN	2130.5	30	0	194.28	0.106	+			15303	GTVDPQELQK	10	61	557.7901584158824	1113.5657638985647	2	557.7911376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTVDPQELQK_	ENSG00000075142|ENST00000265729|SRI;ENST00000472930.6_1_7:87835795-87839460:-|nuORF;ENST00000486860.5_1_7:87838471-87849341:-|nuORF;nc|ENSG00000075142|P30626-2|SRI;nc|ENSG00000075142|P30626-3|SRI	76.16968421966216	0.22691431239609447	3				NaN	NaN	0	NaN	3949	3737	7685
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7689	24.927	NaN	2016	30	0	866.61	0.106	+			15641	GVLGSSKVLAK	11	37	353.5575936707381	1057.6509516124142	3	353.5572814941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GVLGSSKVLAK_	ENSG00000160216|ENST00000291572|AGPAT3;nc|ENSG00000160216|Q9NRZ7-2|AGPAT3;nc|ENSG00000160216|Q9NRZ7-3|AGPAT3	38.753607047826485	0.5749975102143227	3				NaN	NaN	0	NaN	3950	3737	7685
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7690	24.928	NaN	3010.4	30	0	523.35	0.106	+			15642	GVLGSSKVLAK	11	63	529.8321107276622	1057.6496685221243	2	529.8330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GVLGSSKVLAK_	ENSG00000160216|ENST00000291572|AGPAT3;nc|ENSG00000160216|Q9NRZ7-2|AGPAT3;nc|ENSG00000160216|Q9NRZ7-3|AGPAT3	57.885488727062594	0.3423300441360433	3				NaN	NaN	0	NaN	3951	3737	7685
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7691	24.93	NaN	924.37	30	0	95.573	0.032			+	24875	LKGDRAAA	8	43	401.2326796247018	800.4508063162036	2	401.23248291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LKGDRAAA_	REV__ENSG00000137076|ENST00000314888|TLN1;REV__nc|ENSG00000137076|Q9Y490-2|TLN1;REV__TLN1|p.P1628Rfs*20|1|0.44|ENSG00000137076|chr9:35707144-35707144|G/-|frameshift_variant	21.9598887501803	0.7897753010812679	3				NaN	NaN	0	NaN	3952	3737	7685
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7692	24.931	NaN	2185.4	30	0	152.73	0.139	+			37444	SLIEETPR	8	59	472.75586093952035	NaN	0	472.7560119628906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SLIEETPR_	ENST00000358825.9_1_11:129787049-129788476:-|nuORF	56.72105179125745	1.7418937515398478	3				NaN	NaN	0	NaN	3953	3737	7685
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7699	24.95	NaN	7741.9	30	0	2530.7	0.215	+			21992	KSFDTSLIRK	10	62	398.8999626622201	1193.6780585868603	3	398.89947509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSFDTSLIRK_	ENSG00000182220|ENST00000636580|ATP6AP2;nc|ENSG00000182220|O75787-2|ATP6AP2	61.76455937419982	0.3497917639301274	3				NaN	NaN	0	NaN	3957	3740	7698
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7700	24.953	NaN	1743.7	30	0	172.09	0.106	+			34814	RYLENGKETL	10	55	611.8252028578075	1221.635852782415	2	612.3264770507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RYLENGKETL_	ENSG00000204525|ENST00000376228|HLA-C;ENSG00000204642|ENST00000259951|HLA-F;ENSG00000206503|ENST00000376809|HLA-A;ENST00000484704.5_1_6:29691969-29693843:+|nuORF;ENST00000487245.5_1_6:31236948-31239147:-|nuORF;ENST00000495183.5_1_6:29910749-29913287:+|nuORF;ENST00000496081.5_1_6:29910330-29912419:+|nuORF;HLA-C|p.A269Gfs*66|1|0.07|ENSG00000204525|chr6:31270299-31270300|-/C|frameshift_variant;nc|ENSG00000204525|P10321-2|HLA-C;nc|ENSG00000204642|P30511-2|HLA-F;nc|ENSG00000204642|P30511|HLA-F;nc|ENSG00000206341|P01893|HLA-H;nc|ENSG00000206503|P04439-2|HLA-A	53.08895987439943	0.42869529153390606	3				NaN	NaN	0	NaN	3958	3740	7698
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7701	24.955	NaN	3272	30	0	396.39	0.106	+			44686	TTIEEDKSVLK	11	76	631.8456211404283	1261.6766893476565	2	631.8458862304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TTIEEDKSVLK_	ENSG00000183576|ENST00000331768|SETD3	150.15188659993407	7.025925813289175E-05	3				NaN	NaN	0	NaN	3959	3740	7698
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7702	24.957	NaN	1758.7	30	0	277.01	0.106	+			22531	KTQNVFLTR	9	67	553.8194325188781	NaN	0	553.818359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTQNVFLTR_	ENSG00000114904|ENST00000233027|NEK4;nc|ENSG00000114904|P51957-2|NEK4;nc|ENSG00000114904|P51957-3|NEK4;NEK4|p.E836*|1|0.21|ENSG00000114904|chr3:52711797-52711798|-/A|frameshift_variant	49.46582953369473	0.2103742147557666	3				NaN	NaN	0	NaN	3960	3740	7698
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7703	24.959	NaN	1487.5	30	0	271.61	0.106			+	30162	PSERPRTR	8	52	499.7768473847405	997.539141836281	2	499.7754821777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PSERPRTR_	REV__ENST00000534706.1_1_11:6630001-6630227:+|nuORF	30.503639358989545	0.7238069182250283	3				NaN	NaN	0	NaN	3961	3740	7698
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7704	24.961	NaN	1504.5	30	0	126.41	0.106	+			33260	RGFPPYLPP	9	53	522.2851583435861	1042.555763753972	2	522.2853393554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RGFPPYLPP_	ENSG00000150527|ENST00000640607|MIA2;nc|ENSG00000150527|Q96PC5-11|MIA2;nc|ENSG00000150527|Q96PC5-12|MIA2;nc|ENSG00000150527|Q96PC5-13|MIA2;nc|ENSG00000150527|Q96PC5-14|MIA2;nc|ENSG00000150527|Q96PC5-5|MIA2;nc|ENSG00000150527|Q96PC5-6|MIA2;nc|ENSG00000150527|Q96PC5-7|MIA2;nc|ENSG00000150527|Q96PC5-8|MIA2;nc|ENSG00000150527|Q96PC5-9|MIA2	39.252832667884924	0.4290233611298554	3				NaN	NaN	0	NaN	3962	3740	7698
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7705	24.962	NaN	1055.6	30	0	211.72	0.033			+	1194	AEPAAKQK	8	41	421.7407911066417	841.4670292800835	2	421.7391357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AEPAAKQK_	REV__ENSG00000115053|ENST00000322723|NCL;REV__ENST00000461347.5_1_2:232323706-232327997:-|nuORF;REV__ENST00000494618.1_1_2:232322276-232325237:-|nuORF	25.450171626174864	0.7628259754767981	3				NaN	NaN	0	NaN	3963	3740	7698
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7711	24.978	NaN	3959.6	30	0	406.7	0.214	+			1684	AGTATAFHI	9	63	444.73227031913837	887.4499877050768	2	444.7320861816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AGTATAFHI_	ENST00000358170.6_1_1:207968017-207968197:+|nuORF	40.5726180659479	0.4135428067754104	3				NaN	NaN	0	NaN	3966	3743	7710
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7712	24.981	NaN	2035.2	30	0	276.34	0.106	+			33123	RENTQTTIKL	10	61	602.3389021142042	1202.6632512952083	2	602.3384399414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RENTQTTIKL_	ENSG00000165119|ENST00000376263|HNRNPK;ENST00000485383.1_1_3:96068520-96068997:+|nuORF;nc|ENSG00000165119|P61978-3|HNRNPK;nc|ENSG00000165119|P61978|HNRNPK	59.93077597824379	0.36646980200755325	3				NaN	NaN	0	NaN	3967	3743	7710
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7713	24.983	NaN	3223.4	30	0	663.62	0.106	+			2950	ASEAIKGAVVG	11	54	501.28544161784384	1000.5563303024877	2	501.2853698730469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASEAIKGAVVG_	ENSG00000113013|ENST00000297185|HSPA9;ENST00000506477.5_1_5:137906647-137911007:-|nuORF	59.93077597824379	0.32407304095777845	3				NaN	NaN	0	NaN	3968	3743	7710
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7714	24.985	NaN	2234.7	30	0	515.93	0.106	+			50416	YAARARLL	8	51	467.28515507649945	932.5557572197989	2	467.2845458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YAARARLL_	ENSG00000108106|ENST00000264552|UBE2S	28.2542754592877	0.7411748056684583	3				NaN	NaN	0	NaN	3969	3743	7710
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7715	24.987	NaN	3413.7	30	0	635.89	0.106	+			8257	EAGGDAATPD	10	60	452.1887657615065	902.362978589813	2	452.18853759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EAGGDAATPD_	ENSG00000176155|ENST00000694881|CCDC57;nc|ENSG00000176155|Q2TAC2-2|CCDC57;nc|ENSG00000176155|Q2TAC2|CCDC57	60.11826168202944	0.36476464221954025	3				NaN	NaN	0	NaN	3970	3743	7710
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7716	24.989	NaN	2238.6	30	0	304.04	0.106			+	8358	EALIGNIEVL	10	61	535.8085391291823	1069.6025253251646	2	535.8092651367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EALIGNIEVL_	REV__ENSG00000114796|ENST00000242810|KLHL24;REV__nc|ENSG00000114796|Q6TFL4-2|KLHL24	45.02220120713402	0.5028680121232791	3				NaN	NaN	0	NaN	3971	3743	7710
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7717	24.99	NaN	3674.7	30	0	1009.6	0.036	+			4349	ATGQKLMRAV	10	49	358.8746486696705	1073.6021166092114	3	358.8747253417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATGQKLMRAV_	ENSG00000116791|ENST00000340866|CRYZ;nc|ENSG00000116791|Q08257-3|CRYZ	30.317721548370564	0.6322445173429027	3				NaN	NaN	0	NaN	3972	3743	7710
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7726	25.011	NaN	2524.9	30	0	337.38	0.214	+			22528	KTQNFLIQK	9	68	560.330197926147	1118.6458429190939	2	560.3305053710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTQNFLIQK_	BCL10|p.S167Lfs*6|2|0.31|ENSG00000142867|chr1:85267830-85267830|A/-|frameshift_variant;ENSG00000142867|ENST00000648566|BCL10	125.71293069911285	0.017741295328254008	3				NaN	NaN	0	NaN	3978	3746	7725
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7727	25.015	NaN	2696.6	30	0	197.44	0.106	+			9603	ELLKKSEI	8	63	480.2926958345389	958.5708387358778	2	480.2919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ELLKKSEI_	tr|U7SKV9|U7SKV9_FUSNUGlycosyltransferasefamily1domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01950PE=4SV=1	74.25504064058377	0.37144338840759816	3				NaN	NaN	0	NaN	3979	3746	7725
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7728	25.017	NaN	1178	30	0	83.675	0.106				-1	NVASGTCSII	10	63	511.2517396689812	1020.4889264047624	2	511.25177001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_NVASGTC(Carbamidomethyl (C))SII_	ARID4A|p.R1216Dfs*2|1|0.19|ENSG00000032219|chr14:58367001-58367001|A/-|frameshift_variant;ENSG00000032219|ENST00000355431|ARID4A;nc|ENSG00000032219|P29374-2|ARID4A;nc|ENSG00000032219|P29374-3|ARID4A	52.936696900407355	0.4300801048568001	3				NaN	NaN	0	NaN	3980	3746	7725
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7729	25.019	NaN	2809.6	30	0	555.52	0.106			+	-1	LYRGVLLHM	9	46	373.21046597888017	1116.6095685368405	3	372.8764343261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_LYRGVLLHM(Oxidation (M))_	REV__ENSG00000133265|ENST00000433386|HSPBP1;REV__nc|ENSG00000133265|Q9NZL4-2|HSPBP1;REV__nc|ENSG00000133265|Q9NZL4-3|HSPBP1	27.882242232435846	0.5426732730940306	3				NaN	NaN	0	NaN	3981	3746	7725
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7730	25.021	NaN	1880	30	0	306.58	0.106			+	26935	LYGDYHAN	8	59	476.71206297400903	951.4095730148181	2	476.7115478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LYGDYHAN_	REV__ENSG00000079150|ENST00000424785|FKBP7;REV__ENST00000464248.1_1_2:179330632-179343265:-|nuORF;REV__ENST00000470945.1_1_2:179330657-179343310:-|nuORF;REV__nc|ENSG00000079150|Q9Y680-1|FKBP7;REV__nc|ENSG00000079150|Q9Y680-3|FKBP7	47.91560031466742	0.6071945918984287	3				NaN	NaN	0	NaN	3982	3746	7725
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7731	25.022	NaN	1213.8	30	0	150.06	0.036	+			24216	LERPGGNEIT	10	58	543.282983868651	1084.5514148041018	2	543.7850341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LERPGGNEIT_	ENSG00000171560|ENST00000403106|FGA;nc|ENSG00000171560|P02671|FGA	22.579656572578934	0.6954366826851017	3				NaN	NaN	0	NaN	3983	3746	7725
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7732	25.023	NaN	1195.2	30	0	139.45	0.141	+			47562	VRDGGQQPLS	10	52	528.7771246122537	1055.5396962913073	2	528.7763061523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VRDGGQQPLS_	ENSG00000262209|ENST00000576222|PCDHGB3;nc|ENSG00000262209|Q9Y5G1-2|PCDHGB3	31.529811441608018	0.6223461015008678	3				NaN	NaN	0	NaN	3984	3746	7725
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7739	25.042	NaN	4696.5	30	0	876.75	0.214			+	24625	LGSGLGRLA	9	53	422.2563541243796	842.4981553155592	2	422.2558288574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LGSGLGRLA_	REV__ENSG00000151503|ENST00000534548|NCAPD3;REV__NCAPD3|p.A322Lfs*24|1|0.31|ENSG00000151503|chr11:134206654-134206654|G/-|frameshift_variant;REV__NCAPD3|p.S1143Ffs*5|1|0.35|ENSG00000151503|chr11:134168141-134168142|-/A|frameshift_variant	64.20726635412375	0.17854274437659667	3				NaN	NaN	0	NaN	3988	3749	7738
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7740	25.045	NaN	3146.9	30	0	465.08	0.106			+	43887	TNCDRTQSH	9	62	531.2234574499125	1060.432361966625	2	531.2237548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TNCDRTQSH_	REV__nc|ENSG00000197558|A2VEC9|SSPOP	54.776311868738084	0.25715957988447635	3				NaN	NaN	0	NaN	3989	3749	7738
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7741	25.047	NaN	5861.7	30	0	1367	0.106				-1	 	0	63	434.78025352753417	867.5459541218684	2	434.7797546386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3990	3749	7738
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7742	25.049	NaN	5518.7	30	0	1518.2	0.106	+			23243	KYIHSANVL	9	60	522.7956400160508	1043.5767270989015	2	522.7952880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KYIHSANVL_	ENSG00000069956|ENST00000261845|MAPK6;ENSG00000100030|ENST00000215832|MAPK1;ENSG00000102882|ENST00000263025|MAPK3;ENSG00000141639|ENST00000400384|MAPK4;ENST00000478356.5_2_16:30128576-30134273:-|nuORF;ENST00000483869.1_1_16:30129346-30134419:-|nuORF;MAPK6|p.P206*|1|0.03|ENSG00000069956|chr15:52050053-52050054|CC/-|frameshift_variant;nc|ENSG00000100030|P28482-2|MAPK1;nc|ENSG00000102882|P27361-2|MAPK3;nc|ENSG00000102882|P27361-3|MAPK3	66.96192283764107	0.15557981141143568	3				NaN	NaN	0	NaN	3991	3749	7738
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7743	25.051	NaN	1724.7	30	0	196.12	0.035			+	36518	SFDQKREQ	8	63	519.2546094394849	NaN	0	519.2543334960938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SFDQKREQ_	REV__CNNM2|p.R600Q|1|0.38|ENSG00000148842|chr10:103054362-103054362|G/A|missense_variant	29.14955571784316	1.7418937515398478	3				NaN	NaN	0	NaN	3992	3749	7738
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7755	25.077	NaN	1703.2	30	0	263.45	0.214				-1	SPYQMLFC	8	41	354.4844625175554	NaN	0	354.484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_SPYQM(Oxidation (M))LFC(Carbamidomethyl (C))_	nc|ENSG00000110906|Q9H3F6-3|KCTD10	37.15910966729921	1.7418937515398478	3				NaN	NaN	0	NaN	4001	3752	7754
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7756	25.08	NaN	1494.3	30	0	259.63	0.106	+			22134	KSPFTTHV	8	48	458.7484218234388	915.4822907136776	2	458.7478332519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KSPFTTHV_	ENSG00000163349|ENST00000426820|HIPK1;nc|ENSG00000163349|Q86Z02-2|HIPK1;nc|ENSG00000163349|Q86Z02-3|HIPK1;nc|ENSG00000163349|Q86Z02-4|HIPK1	38.80614096846853	0.6637206697844082	3				NaN	NaN	0	NaN	4002	3752	7754
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7757	25.082	NaN	1995.4	30	0	175.14	0.106	+			6167	AVQKAIPMYK	10	65	574.8292562248026	1147.6439595164052	2	574.8289794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVQKAIPMYK_	ENSG00000131100|ENST00000253413|ATP6V1E1;ENST00000439215.1_1_1:43369124-43369580:+|nuORF;ENST00000481365.5_1_22:18080958-18102283:-|nuORF;nc|ENSG00000131100|P36543-2|ATP6V1E1;nc|ENSG00000131100|P36543-3|ATP6V1E1	69.6276240434122	0.2803623802747859	3				NaN	NaN	0	NaN	4003	3752	7754
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7758	25.084	NaN	4055.2	30	0	798.1	0.106	+			48114	VSVAKTQPVV	10	58	343.210034371823	1026.608273715669	3	343.54400634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSVAKTQPVV_	ENSG00000047056|ENST00000263150|WDR37;nc|ENSG00000047056|Q9Y2I8-2|WDR37;nc|ENSG00000047056|Q9Y2I8-3|WDR37	23.04248740728303	0.69165701907106	3				NaN	NaN	0	NaN	4004	3752	7754
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7759	25.086	NaN	2000.3	30	0	209.99	0.106			+	10249	ETKSVLSL	8	58	438.75531607005445	875.4960792069089	2	438.755615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ETKSVLSL_	REV__ENSG00000141655|ENST00000586569|TNFRSF11A;REV__nc|ENSG00000141655|Q9Y6Q6-5|TNFRSF11A;REV__nc|ENSG00000141655|Q9Y6Q6-6|TNFRSF11A	45.97224482568171	0.6192535143389125	3				NaN	NaN	0	NaN	4005	3752	7754
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7760	25.088	NaN	3643.1	30	0	382.17	0.037				-1	ALKAGAVPKMF	11	44	383.5551344297943	1147.643573889583	3	383.55450439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_ALKAGAVPKM(Oxidation (M))F_	ENSG00000171861|ENST00000304478|MRM3;ENST00000574916.1_1_17:685618-686569:+|nuORF	35.17822180527639	0.6208003396870814	3				NaN	NaN	0	NaN	4006	3752	7754
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7761	25.088	NaN	1863.6	30	0	173.25	0.139	+			30627	QASLSFQAL	9	58	482.757568359375	NaN	0	482.757568359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QASLSFQAL_	ENSG00000164171|ENST00000296585|ITGA2	24.519189625965996	0.35377483217337163	3				NaN	NaN	0	NaN	4007	3752	7754
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7769	25.11	NaN	5091.8	30	0	652.11	0.214			+	33312	RGRTRCNAG	9	63	495.7543265854314	989.4941002376628	2	495.7540283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RGRTRCNAG_	REV__ENST00000409072.3_2_7:38725570-38725973:-|nuORF	42.396135135203025	0.392153681582562	3				NaN	NaN	0	NaN	4012	3755	7768
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7770	25.113	NaN	9730.8	30	0	1872.3	0.106	+			39546	STFSTNYR	8	65	488.2304206641798	974.4462883951596	2	488.2298889160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STFSTNYR_	ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53342924-53344195:+|nuORF	71.87747018426188	0.391254423828572	3				NaN	NaN	0	NaN	4013	3755	7768
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7771	25.115	NaN	4598.7	30	0	878.4	0.106				-1	 	0	68	491.78241879579855	981.5502846583971	2	491.78179931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4014	3755	7768
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7772	25.117	NaN	3067.1	30	0	705.2	0.106	+			10789	FAHGNAEL	8	54	429.70910705171036	857.4036611702207	2	429.7088623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FAHGNAEL_	ENSG00000122299|ENST00000355758|ZC3H7A;nc|ENSG00000122299|Q8IWR0-2|ZC3H7A	37.15910966729921	0.6739408393984688	3				NaN	NaN	0	NaN	4015	3755	7768
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7773	25.119	NaN	1555	30	0	95.366	0.106			+	21419	KMTVERPSR	9	62	552.301136519118	NaN	0	552.3015747070312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KMTVERPSR_	REV__ENSG00000163554|ENST00000643759|SPTA1;REV__nc|ENSG00000163554|P02549-2|SPTA1	52.936696900407355	0.1864545979552969	3				NaN	NaN	0	NaN	4016	3755	7768
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7774	25.121	NaN	7947.6	30	0	2470.2	0.037				-1	 	0	54	376.2053965187452	1125.5943601564356	3	376.2049255371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4017	3755	7768
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7775	25.121	NaN	4310.3	30	0	1820.9	0.141			+	41166	SVKNIWILG	9	47	343.8737598672101	1028.5994502018302	3	343.873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVKNIWILG_	REV__ENST00000493208.1_1_5:131825047-131826375:-|nuORF	23.04248740728303	0.5879033540491928	3				NaN	NaN	0	NaN	4018	3755	7768
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7781	25.139	NaN	15748	30	0	7250	0.214	+			26018	LSLDSVRSP	9	65	487.26954497142054	972.5245370096411	2	487.26904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSLDSVRSP_	ENST00000473492.1_1_13:41791330-41800639:-|nuORF;nc|ENSG00000120662|O75570-2|MTRF1	54.776311868738084	0.25715957988447635	3				NaN	NaN	0	NaN	4021	3758	7780
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7782	25.143	NaN	22743	30	0	3296.8	0.106	+			15461	GTYVSSVPR	9	62	483.2565951583766	964.4986373835533	2	483.25579833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTYVSSVPR_	ENSG00000204252|ENST00000229829|HLA-DOA;ENST00000485901.1_1_6:32974617-32975137:-|nuORF	158.07458414430337	0.004987072822166904	3				NaN	NaN	0	NaN	4022	3758	7780
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7783	25.145	NaN	6922.6	30	0	624.08	0.106	+			15317	GTVIHFNNPK	10	72	563.8041617824696	1125.593770631739	2	563.8043823242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTVIHFNNPK_	ENSG00000134717|ENST00000313334|BTF3L4;ENSG00000145741|ENST00000380591|BTF3;nc|ENSG00000134717|Q96K17-2|BTF3L4;nc|ENSG00000145741|P20290-2|BTF3	101.25262130126117	0.07397688119410509	3				NaN	NaN	0	NaN	4023	3758	7780
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7784	25.146	NaN	6047.8	30	0	2040.1	0.106	+			42404	TAKFLQLFG	9	39	342.19929252490414	1023.5760481749124	3	342.1988525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TAKFLQLFG_	TRIM47|p.D438del|1|0.31|ENSG00000132481|chr17:75875086-75875088|GTC/-|inframe_deletion	12.959181472943097	0.6112419832031292	3				NaN	NaN	0	NaN	4024	3758	7780
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7785	25.148	NaN	1650.2	30	0	187.33	0.106	+			17298	IADPSSKTL	9	52	466.25856131066035	930.5025696881207	2	466.25860595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IADPSSKTL_	COL12A1|p.G2777Wfs*37|1|0.15|ENSG00000111799|chr6:75102684-75102685|-/G|frameshift_variant;COL12A1|p.G3027Wfs*19|1|0.1|ENSG00000111799|chr6:75087680-75087681|-/G|frameshift_variant;ENSG00000111799|ENST00000322507|COL12A1;nc|ENSG00000111799|Q99715-2|COL12A1;nc|ENSG00000111799|Q99715-4|COL12A1	67.49366992349736	0.1516260258713357	3				NaN	NaN	0	NaN	4025	3758	7780
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7786	25.15	NaN	5002.4	30	0	510.41	0.106	+			36098	SEKHIEVEV	9	66	535.2802586776878	1068.5459644221755	2	535.2800903320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SEKHIEVEV_	ENSG00000130935|ENST00000253247|NOL11;ENST00000583108.5_1_17:65733207-65733809:+|nuORF	58.22992032128504	0.22837015374068087	3				NaN	NaN	0	NaN	4026	3758	7780
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7787	25.152	NaN	1829.3	30	0	185.85	0.034			+	-1	LSALHFCI	8	55	480.7505601048293	959.4865672764586	2	480.7499694824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_LSALHFC(Carbamidomethyl (C))I_	REV__ENST00000435088.1_1_10:71060267-71060456:-|nuORF	50.0245360154114	0.5941082100236891	3				NaN	NaN	0	NaN	4027	3758	7780
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7798	25.175	NaN	1892.5	30	0	404.47	0.214				-1	 	0	46	396.2428803846122	790.4712078360244	2	396.24224853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4035	3761	7797
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7799	25.179	NaN	2192.7	30	0	422.76	0.106	+			8442	EARKQVEVF	9	64	553.303869928497	1104.5931869237938	2	553.303466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EARKQVEVF_	ENSG00000100911|ENST00000216802|PSME2;ENST00000471700.6_1_14:24612807-24615772:-|nuORF;ENST00000558931.5_1_14:24615401-24615790:-|nuORF;ENST00000559493.5_1_14:24614434-24615772:-|nuORF;ENST00000560592.5_1_14:24614852-24615790:-|nuORF	45.02220120713402	0.3613509778819777	3				NaN	NaN	0	NaN	4036	3761	7797
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7800	25.181	NaN	1295.2	30	0	518.56	0.106	+			37674	SLRSLNRDMQ	10	37	610.3150379756039	1218.6155230180077	2	610.3148193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLRSLNRDMQ_	ENSG00000134121|ENST00000256509|CHL1;nc|ENSG00000134121|O00533|CHL1	22.561587123415745	0.6955842451083604	3				NaN	NaN	0	NaN	4037	3761	7797
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7801	25.183	NaN	2325.5	30	0	349.13	0.106	+			23756	LCDDYDEDS	9	64	537.68074287841	1073.34693282362	2	537.680908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LCDDYDEDS_	ENSG00000168418|ENST00000308251|KCNG4;nc|ENSG00000168418|Q8TDN1-2|KCNG4	25.450171626174864	0.5654022654467333	3				NaN	NaN	0	NaN	4038	3761	7797
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7802	25.185	NaN	3332.7	30	0	249.2	0.036	+			10459	EVNPNTRVM	9	66	530.2664147345254	1058.5182765358506	2	530.7677612304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EVNPNTRVM_	ENSG00000123353|ENST00000243045|ORMDL2;ENSG00000128699|ENST00000392349|ORMDL1;ENSG00000172057|ENST00000304046|ORMDL3;nc|ENSG00000172057|Q8N138-4|ORMDL3	93.19546047674547	0.05585629608842056	3				NaN	NaN	0	NaN	4039	3761	7797
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7810	25.203	NaN	5467.4	30	0	779.91	0.214	+			39949	STMGYMMAK	9	74	518.2186478641702	1034.4227427951403	2	518.218994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_STMGYM(Oxidation (M))MAK_	ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;ENST00000518337.1_1_8:74128289-74128592:-|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P	93.19546047674547	0.05585629608842056	3				NaN	NaN	0	NaN	4044	3764	7809
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7811	25.206	NaN	2393.6	30	0	1023.2	0.106				-1	 	0	30	322.1938439215438	642.3731349098877	2	322.1935119628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4045	3764	7809
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7812	25.208	NaN	2158.3	30	0	494.02	0.106	+			2523	APVKPGPAL	9	54	425.2635864667944	848.5126200003888	2	425.26324462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_APVKPGPAL_	ENSG00000050165|ENST00000683431|DKK3;ENST00000526218.5_1_11:12000483-12031257:-|nuORF;ENST00000530694.5_1_11:12023362-12031257:-|nuORF;ENST00000533900.1_1_11:12023572-12030129:-|nuORF;ENST00000534479.5_1_11:12023699-12030797:-|nuORF	55.50420428727701	0.2510918378945873	3				NaN	NaN	0	NaN	4046	3764	7809
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7813	25.21	NaN	3444.7	30	0	386.97	0.106	+			36684	SGPPGHTMEV	10	60	506.2321332024318	1010.4497134716636	2	506.2319030761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SGPPGHTMEV_	ENSG00000165795|ENST00000556147|NDRG2;ENST00000555650.5_1_14:21485757-21486740:-|nuORF;ENST00000556716.5_1_14:21485757-21486740:-|nuORF;nc|ENSG00000165795|Q9UN36-2|NDRG2;nc|ENSG00000165795|Q9UN36-3|NDRG2;nc|ENSG00000165795|Q9UN36-4|NDRG2;nc|ENSG00000165795|Q9UN36-5|NDRG2;nc|ENSG00000165795|Q9UN36-6|NDRG2	47.657333605630114	0.47858658696240314	3				NaN	NaN	0	NaN	4047	3764	7809
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7814	25.212	NaN	2418.7	30	0	423.77	0.106	+			3280	ASLPLSHAVI	10	45	336.5339040946309	NaN	0	336.5335693359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASLPLSHAVI_	ENSG00000105428|ENST00000222033|ZNRF4	21.9598887501803	0.4201028297492154	3				NaN	NaN	0	NaN	4048	3764	7809
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7815	25.214	NaN	1415.3	30	0	153.78	0.034			+	50947	YICMGRPL	8	63	476.7407516028432	NaN	0	476.74041748046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YICMGRPL_	REV__ENSG00000260220|ENST00000638797|CCDC187;REV__nc|ENSG00000260220|A0A096LP49-2|CCDC187;REV__nc|ENSG00000260220|A0A096LP49|CCDC187	37.028477286268924	1.7418937515398478	3				NaN	NaN	0	NaN	4049	3764	7809
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7816	25.214	NaN	1572.7	30	0	322.83	0.143				-1	RNLMNKLVN	9	34	373.21046597888017	1116.6095685368405	3	373.2103271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_RNLM(Oxidation (M))NKLVN_	ENSG00000150471|ENST00000683033|ADGRL3;nc|ENSG00000150471|Q9HAR2-4|ADGRL3;nc|ENSG00000150471|Q9HAR2|ADGRL3	19.996771675451527	0.6112419832031292	3				NaN	NaN	0	NaN	4050	3764	7809
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7825	25.236	NaN	9848	30	0	1921.1	0.214			+	27184	MDSTEQTLE	9	74	527.2245394850681	1052.4345260369362	2	527.2247924804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MDSTEQTLE_	REV__ENSG00000198765|ENST00000369522|SYCP1;REV__SYCP1|p.D793Tfs*65|1|0.36|ENSG00000198765|chr1:114977603-114977603|A/-|frameshift_variant;REV__SYCP1|p.K931Rfs*6|1|0.27|ENSG00000198765|chr1:114994781-114994781|A/-|frameshift_variant;REV__SYCP1|p.R882Efs*6|1|0.41|ENSG00000198765|chr1:114984799-114984800|-/A|frameshift_variant	76.7741389293348	0.11149722112137898	3				NaN	NaN	0	NaN	4056	3767	7824
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7826	25.239	NaN	8119.3	30	0	889.36	0.106				-1	 	0	75	474.7491811338364	947.4838093344728	2	474.7489929199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4057	3767	7824
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7827	25.241	NaN	5575	30	0	365.28	0.106	+			43224	TEVLKTHGL	9	73	499.28791887802447	996.561284822849	2	499.2872619628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TEVLKTHGL_	ENSG00000142541|ENST00000391857|RPL13A	109.43880257439609	0.029570636687953285	3				NaN	NaN	0	NaN	4058	3767	7824
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7828	25.243	NaN	3538.9	30	0	1340.4	0.106	+			4284	ATGGTFVVK	9	53	440.2507288352565	878.486904737313	2	440.25030517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATGGTFVVK_	ENSG00000198208|ENST00000557413|RPS6KL1;ENST00000555834.5_1_14:75375979-75389943:-|nuORF;nc|ENSG00000198208|Q9Y6S9-2|RPS6KL1;nc|ENSG00000198208|Q9Y6S9-4|RPS6KL1	67.49366992349736	0.1516260258713357	3				NaN	NaN	0	NaN	4059	3767	7824
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7829	25.245	NaN	3373.1	30	0	635.77	0.106	+			38828	SSNDWNVEK	9	68	539.7440018792008	1077.4734508252016	2	539.744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSNDWNVEK_	ENSG00000151348|ENST00000533608|EXT2;EXT2|p.D82Ifs*30|1|0.43|ENSG00000151348|chr11:44107951-44107951|G/-|frameshift_variant;EXT2|p.N517Tfs*3|1|0.49|ENSG00000151348|chr11:44206844-44206844|A/-|frameshift_variant;nc|ENSG00000151348|Q93063-2|EXT2;nc|ENSG00000151348|Q93063-3|EXT2	72.2432373244024	0.13108886737667413	3				NaN	NaN	0	NaN	4060	3767	7824
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7830	25.247	NaN	2223.7	30	0	458.92	0.106			+	16732	HLLNLKAE	8	52	469.27719899382413	936.5398450544483	2	469.27691650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HLLNLKAE_	REV__ENSG00000169918|ENST00000307050|OTUD7A;REV__nc|ENSG00000169918|Q8TE49|OTUD7A;REV__OTUD7A|p.V467Cfs*62|1|0.44|ENSG00000169918|chr15:31484676-31484676|C/-|frameshift_variant	64.20726635412375	0.4601301477144759	3				NaN	NaN	0	NaN	4061	3767	7824
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7831	25.249	NaN	1569.5	30	0	253.24	0.033	+			47725	VSGDWLLL	8	48	451.7505999116599	NaN	0	451.7503967285156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VSGDWLLL_	ENSG00000184156|ENST00000388996|KCNQ3;ENST00000519589.1_1_8:133153289-133492518:-|nuORF;KCNQ3|p.F713Lfs*6|1|0.24|ENSG00000184156|chr8:132129742-132129742|A/-|frameshift_variant;KCNQ3|p.Q653Rfs*16|1|0.06|ENSG00000184156|chr8:132129923-132129924|-/C|frameshift_variant;nc|ENSG00000184156|O43525-2|KCNQ3	42.47446043378293	1.7418937515398478	3				NaN	NaN	0	NaN	4062	3767	7824
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7837	25.263	NaN	17423	30	0	1991.2	0.214	+			40011	STMSTNGIPR	10	81	532.2641706543244	1062.5137883754487	2	532.26416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STMSTNGIPR_	ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF	89.02883481214508	0.13663399911061233	3				NaN	NaN	0	NaN	4065	3770	7836
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7838	25.267	NaN	7267	30	0	1097.9	0.106	+			14258	GSSYPVCVSK	10	74	542.2608850054369	1082.5072170776737	2	542.2609252929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GSSYPVC(Carbamidomethyl (C))VSK_	ENSG00000089127|ENST00000202917|OAS1;ENST00000549820.1_1_12:113344820-113354315:+|nuORF;nc|ENSG00000089127|P00973-2|OAS1;nc|ENSG00000089127|P00973-3|OAS1;nc|ENSG00000089127|P00973-4|OAS1;OAS1|p.N280Tfs*8|1|0.07|ENSG00000089127|chr12:112916689-112916689|A/-|frameshift_variant	78.26377905018397	0.20980573808910843	3				NaN	NaN	0	NaN	4066	3770	7836
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7839	25.269	NaN	5459.1	30	0	1124.2	0.106			+	12207	GARARWAAP	9	59	478.26454835671586	954.5145437802317	2	478.2638854980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GARARWAAP_	REV__ENST00000502873.5_1_4:26585743-26755545:+|nuORF	30.503639358989545	0.5181749237905803	3				NaN	NaN	0	NaN	4067	3770	7836
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7840	25.271	NaN	3219	30	0	509.27	0.106			+	50026	WDPATVTELK	10	67	580.3006948570975	NaN	0	580.3016967773438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_WDPATVTELK_	REV__NT5DC3|p.T536Pfs*48|1|0.14|ENSG00000111696|chr12:103777871-103777871|G/-|frameshift_variant	39.252832667884924	0.37128895876774715	3				NaN	NaN	0	NaN	4068	3770	7836
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7841	25.272	NaN	2042	30	0	187.73	0.106			+	43583	TIGEKGLGLH	10	56	512.7935951192036	1023.5726373052072	2	512.793212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TIGEKGLGLH_	REV__DPP3|p.R159Q|1|0.37|ENSG00000254986|chr11:66486655-66486655|G/A|missense_variant;REV__ENSG00000254986|ENST00000531863|DPP3;REV__nc|ENSG00000254986|Q9NY33-2|DPP3;REV__nc|ENSG00000254986|Q9NY33-4|DPP3	32.81241826257853	0.6118718159329168	3				NaN	NaN	0	NaN	4069	3770	7836
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7842	25.274	NaN	5439	30	0	2225.1	0.106			+	43809	TLNKSLSIFI	10	62	379.2292464035394	1134.6659098108182	3	379.2291259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TLNKSLSIFI_	REV__ENST00000244040.3_1_20:56937129-56937339:+|nuORF	41.42661286455405	0.5359995577334734	3				NaN	NaN	0	NaN	4070	3770	7836
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7843	25.276	NaN	1970.9	30	0	140.72	0.036	+			18117	ILDQALSNAQ	10	60	536.786886345881	1071.559219758562	2	536.7874145507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ILDQALSNAQ_	ENSG00000166025|ENST00000433060|AMOTL1;nc|ENSG00000166025|Q8IY63-2|AMOTL1	36.446750945000026	0.5818864909973037	3				NaN	NaN	0	NaN	4071	3770	7836
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7851	25.294	NaN	2811.6	30	0	1377.8	0.214	+			219	AALSGINGGL	10	45	436.7456407576992	871.4767285821985	2	436.74560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AALSGINGGL_	ENSG00000156299|ENST00000541036|TIAM1;nc|ENSG00000156299|Q13009-2|TIAM1	25.57405402267927	0.6709832231498071	3				NaN	NaN	0	NaN	4076	3773	7850
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7852	25.298	NaN	1735	30	0	280.97	0.106			+	9262	EGYQGSSIA	9	48	456.2088139444418	910.4030749556836	2	456.2083435058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EGYQGSSIA_	REV__ENSG00000007545|ENST00000397412|CRAMP1	56.72105179125745	0.24094814563026265	3				NaN	NaN	0	NaN	4077	3773	7850
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7853	25.299	NaN	2188	30	0	214.29	0.106			+	36726	SGVQKPSAL	9	58	443.7536590504233	885.4927651676467	2	443.7527770996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SGVQKPSAL_	REV__ENSG00000135540|ENST00000343505|NHSL1;REV__nc|ENSG00000135540|Q5SYE7|NHSL1	64.20726635412375	0.17854274437659667	3				NaN	NaN	0	NaN	4078	3773	7850
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7854	25.301	NaN	3460	30	0	630.5	0.106	+			36955	SILSGGTPK	9	54	430.2480050712793	858.4814572093586	2	430.2475280761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SILSGGTPK_	ENSG00000158402|ENST00000323760|CDC25C;nc|ENSG00000158402|P30307-2|CDC25C	67.49366992349736	0.1516260258713357	3				NaN	NaN	0	NaN	4079	3773	7850
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7855	25.303	NaN	3238.4	30	0	1059.2	0.106	+			14948	GTMKAQGVLLK	11	67	573.3393795096014	1144.6642060860027	2	573.3399047851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTMKAQGVLLK_	nc|ENSG00000166482|P55083-2|MFAP4	96.66504779109242	0.07148984068916604	3				NaN	NaN	0	NaN	4080	3773	7850
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7856	25.305	NaN	1838.1	30	0	777.02	0.106				-1	LIFCSICSLC	10	44	608.2827685472013	1214.5509841612025	2	608.2822875976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Carbamidomethyl (C)	_LIFC(Carbamidomethyl (C))SIC(Carbamidomethyl (C))SLC_	ENST00000514760.1_1_5:180222560-180222758:-|nuORF	29.14955571784316	0.6417842315402807	3				NaN	NaN	0	NaN	4081	3773	7850
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7857	25.307	NaN	1398.8	30	0	290.73	0.035	+			21179	KKYEQLKA	8	29	336.5339040946309	NaN	0	336.5345458984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KKYEQLKA_	ENSG00000176248|ENST00000323927|ANAPC2;ENST00000483432.1_1_9:140070142-140074912:-|nuORF;nc|ENSG00000176248|Q9UJX6-2|ANAPC2	18.324413293986947	1.7418937515398478	3				NaN	NaN	0	NaN	4082	3773	7850
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7867	25.329	NaN	5886.3	30	0	3491.2	0.214	+			7282	DAPLLPPRV	9	60	489.29302531819104	976.5714977031821	2	489.2926330566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DAPLLPPRV_	ENSG00000150471|ENST00000683033|ADGRL3;nc|ENSG00000150471|Q9HAR2-4|ADGRL3;nc|ENSG00000150471|Q9HAR2|ADGRL3	42.396135135203025	0.392153681582562	3				NaN	NaN	0	NaN	4089	3776	7866
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7868	25.332	NaN	16779	30	0	3946.1	0.106	+			15211	GTSSMIVPK	9	76	460.25007806792826	918.4856032026565	2	460.250244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTSSMIVPK_	ENSG00000166167|ENST00000370187|BTRC;nc|ENSG00000166167|Q9Y297-2|BTRC	87.69643885390035	0.07135982304947239	3				NaN	NaN	0	NaN	4090	3776	7866
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7869	25.334	NaN	4076.3	30	0	709.66	0.106				-1	RSEIDLMK	8	65	504.263204283939	1006.511855634678	2	504.2632141113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_RSEIDLM(Oxidation (M))K_	tr|U7T5X5|U7T5X5_FUSNUMobA/MobLproteindomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00007PE=3SV=1	71.87747018426188	0.391254423828572	3				NaN	NaN	0	NaN	4091	3776	7866
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7870	25.336	NaN	6010.8	30	0	1285.4	0.106			+	39934	STMGHDAGLF	10	66	518.232456684572	1034.4503604359438	2	518.2328491210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STMGHDAGLF_	REV__ENST00000470506.1_1_2:58390551-58390605:-|nuORF	40.77816245573522	0.5419747034533848	3				NaN	NaN	0	NaN	4092	3776	7866
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7871	25.338	NaN	2287.1	30	0	238.06	0.106	+			11272	FISNSWVY	8	61	508.24622185583416	1014.4778907784683	2	508.24566650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FISNSWVY_	ENST00000565912.1_1_16:57411753-57412206:+|nuORF	38.80614096846853	0.6637206697844082	3				NaN	NaN	0	NaN	4093	3776	7866
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7872	25.339	NaN	1568	30	0	250.74	0.032			+	38923	SSPVAKIGA	9	53	415.2425926290419	NaN	0	415.242431640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSPVAKIGA_	REV__DSCAML1|p.P1274Lfs*7|2|0.3|ENSG00000177103|chr11:117450616-117450616|G/-|frameshift_variant;REV__DSCAML1|p.P2046Qfs*45|1|0.5|ENSG00000177103|chr11:117428533-117428533|G/-|frameshift_variant;REV__DSCAML1|p.S2067Afs*24|1|0.48|ENSG00000177103|chr11:117428472-117428472|G/-|frameshift_variant;REV__ENSG00000177103|ENST00000651296|DSCAML1;REV__nc|ENSG00000177103|Q8TD84-2|DSCAML1	49.44154591367651	0.21054156626303966	3				NaN	NaN	0	NaN	4094	3776	7866
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7873	25.34	NaN	1555.9	30	0	244.81	0.138			+	43752	TLFGGFYV	8	52	452.2332753580864	NaN	0	452.2331848144531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TLFGGFYV_	REV__tr|U7T247|U7T247_FUSNUABCtransporterATP-bindingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00467PE=4SV=1	29.841539824830324	1.7418937515398478	3				NaN	NaN	0	NaN	4095	3776	7866
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7878	25.356	NaN	4913.5	30	0	1418.6	0.213	+			32262	QTLPNAAYNNR	11	61	631.3183346690795	1260.622116404959	2	631.3175659179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QTLPNAAYNNR_	ENSG00000102837|ENST00000219022|OLFM4	109.47833844074708	0.04109199359384862	3				NaN	NaN	0	NaN	4097	3779	7877
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7879	25.359	NaN	2794.1	30	0	304.26	0.106	+			20277	KENQVIVRM	9	73	558.8137036206298	1115.6128543080595	2	558.8135375976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KENQVIVRM_	ENSG00000104413|ENST00000433389|ESRP1;ESRP1|p.L333Sfs*55|1|0.35|ENSG00000104413|chr8:94668009-94668009|G/-|frameshift_variant;ESRP1|p.N512Hfs*7|2|0.33|ENSG00000104413|chr8:94674383-94674384|AA/-|frameshift_variant;ESRP1|p.N512Kfs*8|1|0.48|ENSG00000104413|chr8:94674382-94674383|-/A|frameshift_variant;ESRP1|p.N512Tfs*2|2|0.36|ENSG00000104413|chr8:94674383-94674383|A/-|frameshift_variant;nc|ENSG00000104413|Q6NXG1-2|ESRP1;nc|ENSG00000104413|Q6NXG1-3|ESRP1;nc|ENSG00000104413|Q6NXG1-4|ESRP1;nc|ENSG00000104413|Q6NXG1-5|ESRP1	52.936696900407355	0.27249468807391813	3				NaN	NaN	0	NaN	4098	3779	7877
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7880	25.361	NaN	1426.6	30	0	99.699	0.106	+			37849	SNMEFEER	8	50	521.2192568298618	1040.4239607265235	2	521.7877197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SNMEFEER_	ENSG00000140382|ENST00000336216|HMG20A	25.450171626174864	0.7628259754767981	3				NaN	NaN	0	NaN	4099	3779	7877
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7881	25.363	NaN	967.48	30	0	281.42	0.106	+			7380	DDTADLFPEES	11	33	619.75437980076	NaN	0	619.7542724609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DDTADLFPEES_	ENSG00000089048|ENST00000617257|ESF1	14.864876125193954	0.456735970842152	3				NaN	NaN	0	NaN	4100	3779	7877
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7882	25.365	NaN	986.34	30	0	103.43	0.106				-1	KLESEMTKK	9	59	555.296630859375	NaN	0	555.296630859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_KLESEM(Oxidation (M))TKK_	CCDC18|p.N601Kfs*13|1|0.35|ENSG00000122483|chr1:93216715-93216716|-/A|frameshift_variant;ENSG00000122483|ENST00000690025|CCDC18;nc|ENSG00000122483|Q5T9S5-2|CCDC18;nc|ENSG00000122483|Q5T9S5|CCDC18	42.86426827375447	0.2558691296974908	3				NaN	NaN	0	NaN	4101	3779	7877
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7883	25.367	NaN	2377.8	30	0	1311.3	0.106			+	2165	ALLRQVWL	8	26	333.5418414576976	997.6036949732929	3	333.5417175292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ALLRQVWL_	REV__GRPEL2|p.R12W|1|0.12|ENSG00000164284|chr5:149345573-149345573|C/T|missense_variant	52.29916861842294	0.578018602984656	3				NaN	NaN	0	NaN	4102	3779	7877
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7884	25.368	NaN	1075.6	30	0	70.222	0.034	+			19645	KDKSAMIN	8	49	453.73933296054355	NaN	0	453.7390441894531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KDKSAMIN_	ENST00000442280.1_1_1:197108106-197108244:-|nuORF	44.116797842482775	1.7418937515398478	3				NaN	NaN	0	NaN	4103	3779	7877
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7892	25.387	NaN	11391	30	0	2121.5	0.214	+			35520	SAVEPKTAL	9	68	458.26135520343144	914.5081574736629	2	458.2607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAVEPKTAL_	ENSG00000136153|ENST00000377534|LMO7;ENST00000563635.5_1_13:76195947-76378681:+|nuORF;LMO7|p.D282Mfs*3|1|0.16|ENSG00000136153|chr13:75807821-75807821|A/-|frameshift_variant;nc|ENSG00000136153|Q8WWI1-2|LMO7;nc|ENSG00000136153|Q8WWI1-3|LMO7;nc|ENSG00000136153|Q8WWI1-4|LMO7;nc|ENSG00000136153|Q8WWI1-5|LMO7;nc|ENSG00000136153|Q8WWI1|LMO7	115.49404669440601	0.023927554121326553	3				NaN	NaN	0	NaN	4108	3782	7891
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7893	25.39	NaN	3015.5	30	0	455.39	0.106			+	1957	AIVGGNRKAL	10	63	499.8094034288465	997.604253924493	2	499.8091125488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AIVGGNRKAL_	REV__ENSG00000167011|ENST00000300303|NAT16	51.19269402634007	0.44601001148513897	3				NaN	NaN	0	NaN	4109	3782	7891
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7894	25.392	NaN	2773.1	30	0	301.41	0.106			+	-1	CPVQFKKC	8	60	505.2516249416345	1008.488696950069	2	505.25152587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_CPVQFKKC(Carbamidomethyl (C))_	REV__ENSG00000134294|ENST00000256689|SLC38A2;REV__nc|ENSG00000134294|Q96QD8-2|SLC38A2;REV__SLC38A2|p.F332Cfs*28|1|0.09|ENSG00000134294|chr12:46363785-46363786|-/CAAAAACAAAAAC|frameshift_variant	35.200714571348534	0.6875396545722289	3				NaN	NaN	0	NaN	4110	3782	7891
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7895	25.394	NaN	3133.9	30	0	429.56	0.106	+			34694	RVTPFILKK	9	58	367.90979908013935	NaN	0	367.91009521484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RVTPFILKK_	ENSG00000175768|ENST00000321301|TOMM5;ENST00000354833.7_1_5:70213930-70214023:+|nuORF	52.936696900407355	0.1864545979552969	3				NaN	NaN	0	NaN	4111	3782	7891
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7896	25.396	NaN	2361.2	30	0	971.59	0.106				-1	PSTLPCESLR	10	47	387.1965637056774	1158.5678617172323	3	387.5306396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_PSTLPC(Carbamidomethyl (C))ESLR_	ENSG00000176165|ENST00000313071|FOXG1	32.75053402867276	0.6123771875927935	3				NaN	NaN	0	NaN	4112	3782	7891
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7897	25.397	NaN	1883.4	30	0	199.54	0.036			+	42758	TDRSPSHPAK	10	61	548.279758913128	1094.544964893056	2	548.781982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TDRSPSHPAK_	REV__nc|ENSG00000269955|Q9Y383-2|LUC7L2	40.05817265558897	0.5486090488315611	3				NaN	NaN	0	NaN	4113	3782	7891
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7903	25.412	NaN	9155.4	30	0	3164.1	0.214	+			942	AEIRHVLVT	9	65	519.3095104709565	1036.604468008713	2	519.3091430664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEIRHVLVT_	ENSG00000092841|ENST00000550697|MYL6;ENST00000548725.5_1_12:56552185-56553955:+|nuORF;nc|ENSG00000092841|P60660-2|MYL6	56.43379154798735	0.2433427591689151	3				NaN	NaN	0	NaN	4116	3785	7902
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7904	25.416	NaN	2642.6	30	0	358	0.106			+	50302	WSNYKEQL	8	58	534.2600118243955	1066.505470715591	2	534.2598266601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WSNYKEQL_	REV__ENSG00000157404|ENST00000288135|KIT;REV__KIT|p.N511Kfs*17|1|0.06|ENSG00000157404|chr4:54726041-54726042|-/AG|frameshift_variant;REV__nc|ENSG00000157404|P10721-2|KIT	47.95952297671804	0.6069220427029525	3				NaN	NaN	0	NaN	4117	3785	7902
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7905	25.417	NaN	1679	30	0	156.24	0.106	+			42996	TEKKIILQG	9	58	515.319951667968	NaN	0	515.3204956054688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TEKKIILQG_	ENST00000373518.1_1_X:72347145-72347370:-|nuORF	35.61828744233558	0.29773779453147337	3				NaN	NaN	0	NaN	4118	3785	7902
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7906	25.419	NaN	1514.4	30	0	283.49	0.106				-1	CDRRGFCQ	8	53	521.2192568298618	1040.4239607265235	2	521.218994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_C(Carbamidomethyl (C))DRRGFCQ_	ENST00000380152.7_1_13:32889697-32890592:+|nuORF	29.14955571784316	0.7342621283720113	3				NaN	NaN	0	NaN	4119	3785	7902
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7907	25.421	NaN	3507.4	30	0	1229.7	0.106			+	45507	TYFDLWIML	9	47	401.2025219613374	NaN	0	401.2030029296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TYFDLWIML_	REV__ENST00000332995.11_1_6:13287586-13287817:+|nuORF	27.882242232435846	0.3367954786602879	3				NaN	NaN	0	NaN	4120	3785	7902
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7908	25.423	NaN	1268.3	30	0	88.164	0.106	+			49740	VYNQPGHQF	9	65	545.2595689359738	NaN	0	545.25927734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VYNQPGHQF_	ENSG00000214814|ENST00000522917|FER1L6;FER1L6|p.D1516Gfs*3|1|0.06|ENSG00000214814|chr8:124091575-124091576|-/G|frameshift_variant;FER1L6|p.E470Gfs*8|2|0.42|ENSG00000214814|chr8:123980801-123980802|-/C|frameshift_variant;FER1L6|p.F1321Lfs*26|1|0.16|ENSG00000214814|chr8:124070594-124070595|-/GTTGAATTCAC|frameshift_variant;FER1L6|p.G1237Afs*10|1|0.35|ENSG00000214814|chr8:124067790-124067790|A/-|frameshift_variant;FER1L6|p.N1273Tfs*23|1|0.44|ENSG00000214814|chr8:124069454-124069454|C/-|frameshift_variant	60.97194046774394	0.14517358171632622	3				NaN	NaN	0	NaN	4121	3785	7902
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7909	25.425	NaN	711.62	30	0	110.25	0.038	+			8939	EEYERRLLS	9	36	597.8091251465729	NaN	0	597.809326171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EEYERRLLS_	ENSG00000197283|ENST00000646630|SYNGAP1;nc|ENSG00000197283|Q96PV0-2|SYNGAP1;nc|ENSG00000197283|Q96PV0-3|SYNGAP1;nc|ENSG00000197283|Q96PV0-4|SYNGAP1;SYNGAP1|p.L1302Wfs*8|1|0.21|ENSG00000197283|chr6:33451772-33451772|C/-|frameshift_variant	15.641811463095205	0.38404136392510424	3				NaN	NaN	0	NaN	4122	3785	7902
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7915	25.441	NaN	2576.2	30	0	986.94	0.214			+	3569	ASTTSKAVL	9	47	439.2536072735224	876.4926616138448	2	439.2530212402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASTTSKAVL_	REV__ENSG00000167741|ENST00000381550|GGT6;REV__nc|ENSG00000167741|Q6P531-2|GGT6;REV__nc|ENSG00000167741|Q6P531|GGT6	26.69291269510374	0.5537881896960711	3				NaN	NaN	0	NaN	4125	3788	7914
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7916	25.444	NaN	2485.5	30	0	242.44	0.034	+			2072	ALASVVIHK	9	60	469.29586340462964	936.5771738760593	2	469.2952880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ALASVVIHK_	ENSG00000132436|ENST00000433017|FIGNL1;FIGNL1|p.K309Sfs*16|2|0.21|ENSG00000132436|chr7:50446362-50446362|T/-|frameshift_variant;nc|ENSG00000132436|Q6PIW4-2|FIGNL1	66.42927471994793	0.16001998865088202	3				NaN	NaN	0	NaN	4126	3788	7914
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7922	25.461	NaN	2578.9	30	0	278.11	0.214	+			18510	ISIRGGKLM	9	62	487.7935141941725	973.572475455145	2	487.7931213378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ISIRGGKLM_	ENSG00000185008|ENST00000696593|ROBO2;nc|ENSG00000185008|Q9HCK4-2|ROBO2;nc|ENSG00000185008|Q9HCK4-3|ROBO2;nc|ENSG00000185008|Q9HCK4|ROBO2;ROBO2|p.G821Wfs*7|1|0.37|ENSG00000185008|chr3:77580078-77580079|-/T|frameshift_variant;ROBO2|p.K1290Nfs*20|1|0.44|ENSG00000185008|chr3:77634974-77634974|A/-|frameshift_variant;ROBO2|p.K260Rfs*19|1|0.46|ENSG00000185008|chr3:77493351-77493351|A/-|frameshift_variant;ROBO2|p.P740Tfs*14|1|0.27|ENSG00000185008|chr3:77577498-77577499|-/C|frameshift_variant;ROBO2|p.W347Lfs*21|1|0.36|ENSG00000185008|chr3:77546436-77546437|-/T|frameshift_variant	40.05817265558897	0.419577045485086	3				NaN	NaN	0	NaN	4129	3791	7921
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7923	25.464	NaN	1553.3	30	0	116.19	0.106			+	29210	NVQETISSL	9	54	495.75857505062146	989.5025971680429	2	495.7576904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NVQETISSL_	REV__ENSG00000031003|ENST00000689681|FAM13B;REV__FAM13B|p.F782Lfs*18|2|0.29|ENSG00000031003|chr5:137943145-137943145|A/-|frameshift_variant;REV__nc|ENSG00000031003|Q9NYF5-2|FAM13B;REV__nc|ENSG00000031003|Q9NYF5-3|FAM13B;REV__nc|ENSG00000031003|Q9NYF5|FAM13B	39.252832667884924	0.4290233611298554	3				NaN	NaN	0	NaN	4130	3791	7921
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7924	25.466	NaN	3223.2	30	0	607.56	0.106			+	27327	MHRRLNGPS	9	67	534.278969248564	1066.5433855639278	2	534.2786865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MHRRLNGPS_	REV__ENSG00000197857|ENST00000355684|ZNF44;REV__nc|ENSG00000197857|P15621-2|ZNF44;REV__nc|ENSG00000197857|P15621-3|ZNF44;REV__nc|ENSG00000197857|P15621|ZNF44;REV__ZNF44|p.W256Gfs*34|2|0.32|ENSG00000197857|chr19:12273633-12273633|A/-|frameshift_variant	42.396135135203025	0.392153681582562	3				NaN	NaN	0	NaN	4131	3791	7921
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7925	25.468	NaN	1189.5	30	0	599.66	0.106			+	32302	QTPQQPQQI	9	23	356.52114696348787	NaN	0	356.52117919921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QTPQQPQQI_	REV__ARID2|p.N1778Ifs*13|1|0.15|ENSG00000189079|chr12:45893686-45893686|A/-|frameshift_variant;REV__ENSG00000189079|ENST00000334344|ARID2;REV__nc|ENSG00000189079|Q68CP9-3|ARID2	19.996771675451527	0.3693019437812985	3				NaN	NaN	0	NaN	4132	3791	7921
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7926	25.47	NaN	1952.4	30	0	388.09	0.035	+			11099	FFGGLLVAIA	10	61	504.2980151379798	NaN	0	504.2991943359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FFGGLLVAIA_	ENSG00000007216|ENST00000314669|SLC13A2;nc|ENSG00000007216|Q13183-2|SLC13A2;nc|ENSG00000007216|Q13183-3|SLC13A2;SLC13A2|p.E205Dfs*232|1|0.21|ENSG00000007216|chr17:28491476-28491477|-/T|frameshift_variant	39.252832667884924	0.37128895876774715	3				NaN	NaN	0	NaN	4133	3791	7921
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7931	25.484	NaN	3425	30	0	527.24	0.215	+			14165	GSNGYILNK	9	63	483.2565951583766	964.4986373835533	2	483.25634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSNGYILNK_	ENSG00000181090|ENST00000460843|EHMT1;ENST00000371394.6_1_9:140611085-140686569:+|nuORF;nc|ENSG00000181090|Q9H9B1-3|EHMT1;nc|ENSG00000181090|Q9H9B1-4|EHMT1	71.87747018426188	0.13267044672804276	3				NaN	NaN	0	NaN	4135	3794	7930
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7932	25.487	NaN	1880.5	30	0	298.37	0.106			+	-1	TVVRLNIGTMQ	11	66	624.3418830006435	1246.669213068087	2	624.34228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_TVVRLNIGTM(Oxidation (M))Q_	REV__KCTD9|p.A328V|1|0.24|ENSG00000104756|chr8:25432574-25432574|G/A|missense_variant	53.08895987439943	0.38514566451266113	3				NaN	NaN	0	NaN	4136	3794	7930
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7933	25.489	NaN	2576.2	30	0	143.61	0.106	+			20660	KGKSIVDVGL	10	64	508.31200623845075	1014.6094595437015	2	508.3118896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KGKSIVDVGL_	ENSG00000167778|ENST00000301463|SPRYD3	51.52775601994872	0.4429225830406686	3				NaN	NaN	0	NaN	4137	3794	7930
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7934	25.491	NaN	1745.4	30	0	168.65	0.106	+			25645	LQTCMEVL	8	51	468.73085662038903	NaN	0	468.7311706542969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LQTCMEVL_	ENSG00000164134|ENST00000296543|NAA15	42.396135135203025	1.7418937515398478	3				NaN	NaN	0	NaN	4138	3794	7930
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7935	25.493	NaN	1930.5	30	0	127.24	0.106			+	31610	QLYASFAIRA	10	67	570.3144363575007	1138.6143197818012	2	570.3147583007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QLYASFAIRA_	REV__ENSG00000119685|ENST00000298832|TTLL5;REV__ENST00000555422.5_1_14:76198560-76243086:+|nuORF;REV__nc|ENSG00000119685|Q6EMB2-2|TTLL5	56.632244143249146	0.3964695498866976	3				NaN	NaN	0	NaN	4139	3794	7930
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7936	25.495	NaN	2114.4	30	0	174.09	0.037	+			21318	KLTGVIVENE	10	43	367.8756302112203	NaN	0	367.8760070800781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KLTGVIVENE_	BOD1L1|p.P2199Qfs*25|1|0.12|ENSG00000038219|chr4:13600304-13600304|G/-|frameshift_variant;ENSG00000038219|ENST00000040738|BOD1L1	31.634271133179894	0.39630454568332174	3				NaN	NaN	0	NaN	4140	3794	7930
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7944	25.513	NaN	3396.5	30	0	380.95	0.214	+			28886	NQGFSEPEY	9	63	535.726088538731	1069.437624144262	2	535.7255249023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NQGFSEPEY_	ADCY3|p.V415Cfs*27|1|0.38|ENSG00000138031|chr2:24839985-24839985|C/-|frameshift_variant;ENSG00000138031|ENST00000679454|ADCY3	45.9519527083369	0.35044536499095585	3				NaN	NaN	0	NaN	4145	3797	7943
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7945	25.517	NaN	6326.6	30	0	3407.4	0.106	+			36465	SEVPLDQKEN	10	65	579.7853610613786	1157.556169189557	2	579.7863159179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEVPLDQKEN_	COL21A1|p.K712Rfs*48|1|0.1|ENSG00000124749|chr6:56064615-56064615|T/-|frameshift_variant	29.170058357718403	0.6416167986984785	3				NaN	NaN	0	NaN	4146	3797	7943
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7946	25.519	NaN	2414.6	30	0	286.79	0.106	+			10805	FALGPTISF	9	57	476.75926025383376	951.5039675744675	2	476.7587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FALGPTISF_	ENSG00000204020|ENST00000404459|LIPN	57.81127852772723	0.2318599694398087	3				NaN	NaN	0	NaN	4147	3797	7943
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7947	25.52	NaN	2102.1	30	0	380.95	0.106	+			15105	GTQPGPLLK	9	54	455.77180749012194	909.5290620470439	2	455.7715148925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTQPGPLLK_	ENSG00000123243|ENST00000397146|ITIH5;ENST00000476417.5_1_10:7615057-7659255:-|nuORF;ENST00000492668.5_1_10:7611547-7618533:-|nuORF;ITIH5|p.L690*|1|0.49|ENSG00000123243|chr10:7569749-7569749|G/-|frameshift_variant;nc|ENSG00000123243|Q86UX2-2|ITIH5;nc|ENSG00000123243|Q86UX2-3|ITIH5;nc|ENSG00000123243|Q86UX2-4|ITIH5;nc|ENSG00000123243|Q86UX2|ITIH5	35.61828744233558	0.47037581924408073	3				NaN	NaN	0	NaN	4148	3797	7943
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7948	25.522	NaN	4123.2	30	0	715.95	0.106	+			48281	VTDPSIPIRK	10	44	375.8928804559396	1124.6568119680187	3	375.8927307128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTDPSIPIRK_	ELF4|p.A554Pfs*13|1|0.32|ENSG00000102034|chrX:130067053-130067053|C/-|frameshift_variant;ELF4|p.Q341Rfs*30|2|0.25|ENSG00000102034|chrX:130069466-130069466|G/-|frameshift_variant;ENSG00000102034|ENST00000308167|ELF4	47.95952297671804	0.47580206326914537	3				NaN	NaN	0	NaN	4149	3797	7943
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7949	25.524	NaN	2737.6	30	0	280.17	0.036	+			10306	ETQNVETKL	9	65	531.2779655764718	1060.5413782197436	2	531.7802124023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ETQNVETKL_	ENSG00000138182|ENST00000371728|KIF20B;KIF20B|p.K592Rfs*4|1|0.37|ENSG00000138182|chr10:89724010-89724010|A/-|frameshift_variant;KIF20B|p.N1214Tfs*5|1|0.15|ENSG00000138182|chr10:89738478-89738478|A/-|frameshift_variant;KIF20B|p.R1552Gfs*9|1|0.39|ENSG00000138182|chr10:89758852-89758852|A/-|frameshift_variant;nc|ENSG00000138182|Q96Q89-2|KIF20B;nc|ENSG00000138182|Q96Q89-3|KIF20B;nc|ENSG00000138182|Q96Q89-4|KIF20B	58.22992032128504	0.22837015374068087	3				NaN	NaN	0	NaN	4150	3797	7943
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7950	25.525	NaN	2439.6	30	0	333.83	0.139			+	13571	GLTLYLHK	8	57	472.780616676868	943.5466804205361	2	473.28125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GLTLYLHK_	REV__ENSG00000152779|ENST00000371790|SLC16A12	47.91560031466742	0.6071945918984287	3				NaN	NaN	0	NaN	4151	3797	7943
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7958	25.545	NaN	13636	30	0	2945.4	0.214				-1	QCVASWAKL	9	62	354.85163035639766	1061.533061669393	3	354.85137939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_QC(Carbamidomethyl (C))VASWAKL_	ENST00000372890.5_2_9:131076101-131077892:-|nuORF	52.936696900407355	0.27249468807391813	3				NaN	NaN	0	NaN	4156	3800	7957
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7959	25.548	NaN	5160.7	30	0	495.49	0.106			+	-1	YDEMDSDSP	9	63	537.68074287841	1073.34693282362	2	537.6813354492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_YDEM(Oxidation (M))DSDSP_	REV__ENSG00000164190|ENST00000282516|NIPBL;REV__nc|ENSG00000164190|Q6KC79-2|NIPBL;REV__NIPBL|p.F1423Lfs*15|1|0.43|ENSG00000164190|chr5:37008032-37008032|T/-|frameshift_variant;REV__NIPBL|p.I2776Lfs*3|1|0.17|ENSG00000164190|chr5:37064797-37064797|A/-|frameshift_variant;REV__NIPBL|p.L2220Ffs*3|1|0.21|ENSG00000164190|chr5:37048567-37048568|-/T|frameshift_variant	17.364965105453717	0.6112419832031293	3				NaN	NaN	0	NaN	4157	3800	7957
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7960	25.55	NaN	2823.8	30	0	474.91	0.106	+			777	AEFAERSVA	9	51	490.2463614624036	978.4781699916073	2	490.2459716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEFAERSVA_	CON__Q3SX28;ENSG00000143549|ENST00000651641|TPM3;ENSG00000198467|ENST00000645482|TPM2;ENST00000397772.2_1_20:32500135-32500381:-|nuORF;ENST00000469717.5_1_1:154130117-154143232:-|nuORF;ENST00000600996.1_1_19:42012510-42012810:+|nuORF;nc|ENSG00000143549|P06753-2|TPM3;nc|ENSG00000143549|P06753-3|TPM3;nc|ENSG00000143549|P06753-4|TPM3;nc|ENSG00000143549|P06753-5|TPM3;nc|ENSG00000143549|P06753-6|TPM3;nc|ENSG00000143549|P06753-7|TPM3;nc|ENSG00000198467|P07951-2|TPM2;nc|ENSG00000198467|P07951-3|TPM2;TPM3|p.R239H|1|0.1|ENSG00000143549|chr1:154170459-154170459|C/T|missense_variant	70.39856735676683	0.13906523160059378	3				NaN	NaN	0	NaN	4158	3800	7957
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7961	25.552	NaN	1822.9	30	0	196.18	0.106	+			44940	TVARLYISK	9	63	525.819380708015	1049.62420848283	2	525.8196411132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TVARLYISK_	ENSG00000155980|ENST00000455537|KIF5A;ENSG00000170759|ENST00000302418|KIF5B;KIF5B|p.M622Wfs*8|1|0.15|ENSG00000170759|chr10:32022898-32022898|T/-|frameshift_variant	63.42647028704847	0.1850514934184437	3				NaN	NaN	0	NaN	4159	3800	7957
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7962	25.554	NaN	2011	30	0	289.27	0.106	+			26841	LVVDNGSGMCK	11	62	590.2792567657118	1178.5439605982235	2	590.2786865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_LVVDNGSGMC(Carbamidomethyl (C))K_	ACTBL2|p.R29Gfs*7|1|0.37|ENSG00000169067|chr5:57482623-57482623|G/-|frameshift_variant;ENSG00000075624|ENST00000646664|ACTB;ENSG00000169067|ENST00000423391|ACTBL2;ENST00000418351.1_1_15:44282253-44282364:-|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000477812.1_1_7:5569027-5569288:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF	72.2432373244024	0.21703855426835802	3				NaN	NaN	0	NaN	4160	3800	7957
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7963	25.556	NaN	2215.3	30	0	189.49	0.035			+	1548	AGEVGWGILL	10	54	507.78487619011145	NaN	0	507.784912109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AGEVGWGILL_	REV__ENST00000416671.5_1_22:29137938-29138193:-|nuORF	38.80614096846853	0.372755673314885	3				NaN	NaN	0	NaN	4161	3800	7957
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7964	25.556	NaN	2625.8	30	0	262.32	0.144			+	51406	YTQEILPFK	9	49	380.2107707338941	NaN	0	379.876220703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YTQEILPFK_	REV__ENSG00000157152|ENST00000621198|SYN2;REV__nc|ENSG00000157152|Q92777-2|SYN2	30.317721548370564	0.32449924987115025	3				NaN	NaN	0	NaN	4162	3800	7957
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7970	25.573	NaN	8436.5	30	0	877.59	0.214			+	49505	VWELSVSY	8	62	491.7466461887195	981.4787394442391	2	491.74566650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VWELSVSY_	REV__TTLL6|p.R152W|1|0.25|ENSG00000170703|chr17:48801551-48801551|G/A|missense_variant	65.80317337860623	0.44433089765398776	3				NaN	NaN	0	NaN	4165	3803	7969
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7971	25.576	NaN	4448.1	30	0	488.13	0.106			+	18415	ISAGHQLLL	9	69	476.28515440904863	950.5557558848973	2	476.2844543457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ISAGHQLLL_	REV__ENSG00000105186|ENST00000306065|ANKRD27;REV__ENSG00000124227|ENST00000457363|ANKRD60	76.7741389293348	0.11149722112137898	3				NaN	NaN	0	NaN	4166	3803	7969
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7972	25.578	NaN	2027.6	30	0	215.78	0.106			+	-1	NVGCDMAL	8	57	440.18869894308784	878.3628449529757	2	440.1886291503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_NVGC(Carbamidomethyl (C))DMAL_	REV__ENSG00000165140|ENST00000375326|FBP1;REV__FBP1|p.G294Efs*11|1|0.11|ENSG00000165140|chr9:94603517-94603517|C/-|frameshift_variant	44.116797842482775	0.6307669463330267	3				NaN	NaN	0	NaN	4167	3803	7969
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7973	25.58	NaN	3114.3	30	0	330.08	0.106	+			39171	SSYLNTVQK	9	69	520.2744221944699	1038.5342914557398	2	520.2745971679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSYLNTVQK_	ENSG00000179454|ENST00000396128|KLHL28	70.8162118820467	0.13725933411854815	3				NaN	NaN	0	NaN	4168	3803	7969
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7974	25.582	NaN	4693.4	30	0	784.8	0.106			+	26088	LSMQLNKL	8	59	473.77193043388223	945.5293079345645	2	473.77069091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSMQLNKL_	REV__ENST00000310301.8_1_7:38908822-38937725:-|nuORF	49.44154591367651	0.597725784090933	3				NaN	NaN	0	NaN	4169	3803	7969
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7975	25.583	NaN	2095.1	30	0	200.33	0.106	+			41322	SVLQKVVGK	9	60	479.3080590282381	NaN	0	479.3081970214844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVLQKVVGK_	ENST00000541357.6_1_14:74360502-74371669:+|nuORF;ENST00000555044.5_2_14:74364914-74371672:+|nuORF	63.53385203322761	0.134247007536971	3				NaN	NaN	0	NaN	4170	3803	7969
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7976	25.585	NaN	1518.2	30	0	193.73	0.033	+			15368	GTVVNALGK	9	55	429.7556124022274	NaN	0	429.7554626464844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GTVVNALGK_	ENSG00000115524|ENST00000335508|SF3B1	30.317721548370564	0.32449924987115025	3				NaN	NaN	0	NaN	4171	3803	7969
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7982	25.601	NaN	21319	30	0	2749	0.214	+			23052	KVTEGSFVYK	10	82	579.3139825586074	1156.6134121840148	2	579.3138427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVTEGSFVYK_	ENSG00000057608|ENST00000380191|GDI2;GDI2|p.S222Afs*20|1|0.1|ENSG00000057608|chr10:5785197-5785197|T/-|frameshift_variant	183.72194652814687	0.0008638117737139713	3				NaN	NaN	0	NaN	4174	3806	7981
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7983	25.605	NaN	7220.4	30	0	620.51	0.106	+			47787	VSIEAGSAVGK	11	70	509.28266523558074	1016.5507775379615	2	509.2822570800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSIEAGSAVGK_	ENSG00000176945|ENST00000447234|MUC20;ENST00000457750.1_1_3:195341833-195346985:+|nuORF;nc|ENSG00000176945|Q8N307-3|MUC20	167.93327368760816	3.3692101381100775E-05	3				NaN	NaN	0	NaN	4175	3806	7981
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7984	25.607	NaN	3662.7	30	0	390.89	0.106	+			43033	TEKVSKISL	9	70	502.80333514990446	1003.5921173666089	2	502.8026428222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TEKVSKISL_	ENSG00000054523|ENST00000676179|KIF1B;ENSG00000130294|ENST00000498729|KIF1A;KIF1A|p.N1306Kfs*14|1|0.46|ENSG00000130294|chr2:240725306-240725307|-/T|frameshift_variant;KIF1A|p.R782Afs*30|1|0.33|ENSG00000130294|chr2:240760738-240760738|G/-|frameshift_variant;KIF1B|p.N365Mfs*8|1|0.32|ENSG00000054523|chr1:10278037-10278037|C/-|frameshift_variant;nc|ENSG00000054523|O60333-2|KIF1B;nc|ENSG00000054523|O60333-3|KIF1B;nc|ENSG00000054523|O60333-4|KIF1B;nc|ENSG00000130294|Q12756-2|KIF1A;nc|ENSG00000130294|Q12756|KIF1A	65.2775769800794	0.16962058972581526	3				NaN	NaN	0	NaN	4176	3806	7981
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7985	25.608	NaN	4326.9	30	0	2234.4	0.106			+	37978	SPHSFLKWR	9	49	386.545176139543	1156.613699018829	3	386.5448913574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SPHSFLKWR_	REV__ENSG00000150361|ENST00000377844|KLHL1;REV__KLHL1|p.F509Cfs*15|1|0.34|ENSG00000150361|chr13:69796850-69796851|AA/-|frameshift_variant;REV__KLHL1|p.L143Wfs*32|1|0.54|ENSG00000150361|chr13:70107277-70107277|T/-|frameshift_variant;REV__KLHL1|p.Y236Vfs*26|1|0.05|ENSG00000150361|chr13:69961419-69961420|-/ATTATAAC|frameshift_variant	29.14955571784316	0.5308295550522326	3				NaN	NaN	0	NaN	4177	3806	7981
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7986	25.61	NaN	2418.9	30	0	344.75	0.106	+			13431	GLGTWKSEPG	10	71	516.2630509622663	1030.5115489913326	2	516.2630004882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GLGTWKSEPG_	ENSG00000117448|ENST00000351829|AKR1A1	41.42661286455405	0.5359995577334734	3				NaN	NaN	0	NaN	4178	3806	7981
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7987	25.612	NaN	2436.7	30	0	465.77	0.106	+			3327	ASMASESTVK	10	57	505.74408034271954	1009.4736077522391	2	505.7429504394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASMASESTVK_	ENSG00000131725|ENST00000254029|WDR44;nc|ENSG00000131725|Q5JSH3-2|WDR44;nc|ENSG00000131725|Q5JSH3-4|WDR44;WDR44|p.N542Mfs*11|2|0.39|ENSG00000131725|chrX:118409575-118409575|A/-|frameshift_variant	41.42661286455405	0.5359995577334734	3				NaN	NaN	0	NaN	4179	3806	7981
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7988	25.614	NaN	3145	30	0	391.9	0.036	+			35854	SEDKKNIIL	9	72	530.3066902831479	1058.5988276330957	2	530.3070678710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SEDKKNIIL_	ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65623404-65625570:-|nuORF	82.24051045832904	0.08786059719216216	3				NaN	NaN	0	NaN	4180	3806	7981
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7998	25.636	NaN	11500	30	0	2501.9	0.214	+			40082	STNSFALNK	9	78	491.25361047333104	980.4926680134621	2	491.2534484863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STNSFALNK_	BPTF|p.D2844Afs*20|1|0.08|ENSG00000171634|chr17:67959766-67959767|-/C|frameshift_variant;BPTF|p.K2718Nfs*36|3|0.12|ENSG00000171634|chr17:67948150-67948150|A/-|frameshift_variant;ENSG00000171634|ENST00000306378|BPTF;ENST00000579209.1_1_17:62758032-62758825:-|nuORF;nc|ENSG00000171634|Q12830-4|BPTF;nc|ENSG00000171634|Q12830|BPTF	143.37361013837676	0.008897369944672323	3				NaN	NaN	0	NaN	4187	3809	7997
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7999	25.639	NaN	5944.4	30	0	802.09	0.106	+			40440	STVNKWTLK	9	75	538.809273222932	1075.603993512664	2	538.8089599609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STVNKWTLK_	ENSG00000114742|ENST00000302313|WDR48;nc|ENSG00000114742|Q8TAF3-3|WDR48;nc|ENSG00000114742|Q8TAF3-4|WDR48	115.23196543181992	0.024086211614104236	3				NaN	NaN	0	NaN	4188	3809	7997
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8000	25.641	NaN	1670.4	30	0	282.38	0.106	+			28061	NAARSQLETY	10	59	576.7865942884417	1151.5586356436834	2	576.7866821289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NAARSQLETY_	ENSG00000168172|ENST00000307602|HOOK3;ENST00000527306.1_1_8:42752256-42852891:+|nuORF;HOOK3|p.N380Tfs*13|1|0.32|ENSG00000168172|chr8:42973302-42973302|A/-|frameshift_variant	83.6470233535746	0.16744595502813267	3				NaN	NaN	0	NaN	4189	3809	7997
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8001	25.643	NaN	1928.5	30	0	298.74	0.106	+			1673	AGSGKTTFV	9	49	434.23168037930895	866.4488078254179	2	434.2311096191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AGSGKTTFV_	ENSG00000198522|ENST00000610189|GPN1;ENST00000478484.5_1_2:27851925-27854072:+|nuORF;nc|ENSG00000198522|Q9HCN4-5|GPN1	44.116797842482775	0.37197099687881774	3				NaN	NaN	0	NaN	4190	3809	7997
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8002	25.645	NaN	2267.7	30	0	847.65	0.106	+			3378	ASPREKLS	8	55	444.25149277853166	886.4884326238633	2	444.2516174316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASPREKLS_	ENSG00000131183|ENST00000324417|SLC34A1	30.317721548370564	0.7252424349988982	3				NaN	NaN	0	NaN	4191	3809	7997
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8003	25.647	NaN	1846.9	30	0	180.14	0.035			+	25601	LQKQTSDPI	9	63	515.2824432302658	NaN	0	515.2825317382812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LQKQTSDPI_	REV__ENSG00000038427|ENST00000265077|VCAN;REV__nc|ENSG00000038427|P13611-3|VCAN;REV__nc|ENSG00000038427|P13611-5|VCAN;REV__VCAN|p.E2431Rfs*10|1|0.16|ENSG00000038427|chr5:83540290-83540291|-/G|frameshift_variant	44.116797842482775	0.2472372736944149	3				NaN	NaN	0	NaN	4192	3809	7997
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8004	25.647	NaN	2870.1	30	0	391.72	0.14	+			11330	FLCRLHTY	8	58	526.7719583370939	1051.5293637409877	2	526.7723999023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FLCRLHTY_	ENSG00000135569|ENST00000258034|TAAR5	35.61828744233558	0.6843154725607303	3				NaN	NaN	0	NaN	4193	3809	7997
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8017	25.676	NaN	19384	30	0	4072.4	0.214				-1	 	0	70	425.24549779005014	848.4764426469003	2	425.2448425292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4203	3812	8016
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8018	25.68	NaN	4016.2	30	0	417.26	0.106	+			46363	VEKSVNEVM	9	70	517.763450405298	1033.512347877396	2	517.7633056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VEKSVNEVM_	ENSG00000120694|ENST00000320027|HSPH1;nc|ENSG00000120694|Q92598-2|HSPH1;nc|ENSG00000120694|Q92598-3|HSPH1;nc|ENSG00000120694|Q92598-4|HSPH1	48.601550744091256	0.3193666407755445	3				NaN	NaN	0	NaN	4204	3812	8016
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8019	25.682	NaN	2842.7	30	0	438.91	0.106				-1	 	0	62	533.2852030183393	532.2779265517393	1	533.2849731445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4205	3812	8016
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8020	25.683	NaN	3415.2	30	0	404.48	0.106	+			17778	IESSVGKSL	9	59	460.25873878938796	918.502924645576	2	460.258056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IESSVGKSL_	ENSG00000151151|ENST00000373935|IPMK	83.6470233535746	0.08277643980271215	3				NaN	NaN	0	NaN	4206	3812	8016
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8021	25.685	NaN	3535.9	30	0	339.62	0.106	+			20145	KEKPPITVV	9	63	505.8164150790092	1009.6182772248184	2	505.8155212402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEKPPITVV_	ENSG00000141127|ENST00000268835|PRPSAP2;ENSG00000161542|ENST00000446526|PRPSAP1;ENST00000472686.1_1_17:74309820-74324990:-|nuORF;ENST00000592474.1_1_17:74309820-74309979:-|nuORF;nc|ENSG00000141127|O60256-2|PRPSAP2;nc|ENSG00000141127|O60256-3|PRPSAP2;nc|ENSG00000141127|O60256-4|PRPSAP2;nc|ENSG00000161542|Q14558|PRPSAP1	72.87924865735499	0.12833875048249987	3				NaN	NaN	0	NaN	4207	3812	8016
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8022	25.687	NaN	1848.6	30	0	100.63	0.035	+			751	AEEAIKIAR	9	60	500.7932434082031	NaN	0	500.7932434082031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEEAIKIAR_	tr|U7SK63|U7SK63_FUSNUThiazolesynthaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=thiGPE=3SV=1	49.536043120802724	0.20989033510253738	3				NaN	NaN	0	NaN	4208	3812	8016
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8023	25.688	NaN	1879.6	30	0	496.16	0.139				-1	GMTSFREV	8	46	471.72077955251274	NaN	0	471.72076416015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_GM(Oxidation (M))TSFREV_	ENSG00000005810|ENST00000544440|MYCBP2;MYCBP2|p.N1867Tfs*9|1|0.15|ENSG00000005810|chr13:77171572-77171572|T/-|frameshift_variant;MYCBP2|p.N3049*|1|0.11|ENSG00000005810|chr13:77097894-77097895|TT/-|frameshift_variant;MYCBP2|p.P4047Qfs*26|2|0.35|ENSG00000005810|chr13:77067782-77067782|G/-|frameshift_variant;MYCBP2|p.T4311Pfs*37|1|0.14|ENSG00000005810|chr13:77059619-77059619|G/-|frameshift_variant;MYCBP2|p.V3749*|1|0.12|ENSG00000005810|chr13:77081486-77081486|C/-|frameshift_variant;nc|ENSG00000005810|O75592-2|MYCBP2	35.200714571348534	1.7418937515398478	3				NaN	NaN	0	NaN	4209	3812	8016
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8029	25.705	NaN	10909	30	0	1567.3	0.214	+			1762	AIANFTNQK	9	70	503.76992899980206	1005.5253050664041	2	503.76934814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AIANFTNQK_	ENSG00000138756|ENST00000502613|BMP2K;nc|ENSG00000138756|Q9NSY1-2|BMP2K;nc|ENSG00000138756|Q9NSY1-3|BMP2K	176.08678752253132	0.0017279326439731339	3				NaN	NaN	0	NaN	4212	3815	8028
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8030	25.709	NaN	4765.4	30	0	1068.6	0.106	+			46938	VIYNEQMASK	10	77	591.795290735336	1181.576028537472	2	591.795166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VIYNEQMASK_	ENSG00000185432|ENST00000332160|METTL7A	139.38205640894643	0.010918844784185366	3				NaN	NaN	0	NaN	4213	3815	8028
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8031	25.711	NaN	5681.1	30	0	413.92	0.106	+			24260	LEVELDQAR	9	73	536.7860446013293	1071.5575362694585	2	536.7861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LEVELDQAR_	ENSG00000137497|ENST00000393695|NUMA1;nc|ENSG00000137497|Q14980-2|NUMA1;nc|ENSG00000137497|Q14980-3|NUMA1;nc|ENSG00000137497|Q14980-4|NUMA1;NUMA1|p.K1766Rfs*2|1|0.39|ENSG00000137497|chr11:72007357-72007357|G/-|frameshift_variant;NUMA1|p.L1786Pfs*18|1|0.23|ENSG00000137497|chr11:72007295-72007296|-/G|frameshift_variant	87.69643885390035	0.07135982304947239	3				NaN	NaN	0	NaN	4214	3815	8028
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8032	25.713	NaN	4847	30	0	1368.3	0.106				-1	 	0	57	481.7619989481971	961.5094449631943	2	481.76129150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4215	3815	8028
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8033	25.714	NaN	3215.4	30	0	609.85	0.106			+	47735	VSGGLPVHR	9	55	461.2660876237243	920.5176223142486	2	461.265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSGGLPVHR_	REV__ENSG00000164080|ENST00000684192|RAD54L2;REV__ENST00000461680.1_1_3:51673299-51697433:+|nuORF;REV__ENST00000487093.5_1_3:51669772-51697433:+|nuORF;REV__RAD54L2|p.S1325Pfs*18|1|0.33|ENSG00000164080|chr3:51662984-51662984|C/-|frameshift_variant	42.396135135203025	0.392153681582562	3				NaN	NaN	0	NaN	4216	3815	8028
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8034	25.716	NaN	4415.3	30	0	525.99	0.106	+			4662	ATLQNVLRK	9	68	521.8222401462582	1041.6299273593163	2	521.82275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATLQNVLRK_	ENSG00000108424|ENST00000290158|KPNB1;nc|ENSG00000108424|Q14974-2|KPNB1	106.68306549817024	0.032382560583716295	3				NaN	NaN	0	NaN	4217	3815	8028
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8035	25.718	NaN	1776.9	30	0	263.44	0.039	+			33710	RPFEENGACKY	11	59	657.3009630009178	1312.5873730686355	2	657.3014526367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RPFEENGACKY_	ENSG00000185650|ENST00000439696|ZFP36L1;ENST00000555997.1_1_14:69256252-69257717:-|nuORF;ZFP36L1|p.G271Vfs*36|1|0.32|ENSG00000185650|chr14:68789738-68789738|C/-|frameshift_variant;ZFP36L1|p.H177Tfs*56|1|0.79|ENSG00000185650|chr14:68790021-68790021|G/-|frameshift_variant;ZFP36L1|p.P274Rfs*33|1|0.26|ENSG00000185650|chr14:68789729-68789729|G/-|frameshift_variant;ZFP36L1|p.S294Afs*13|1|0.33|ENSG00000185650|chr14:68789671-68789671|G/-|frameshift_variant	104.42354056486148	0.051542069836817306	3				NaN	NaN	0	NaN	4218	3815	8028
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8046	25.742	NaN	5106	30	0	840.12	0.214			+	7840	DQLVKSDGL	9	64	487.76165293605715	973.5087529389143	2	487.76123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DQLVKSDGL_	REV__ENSG00000143971|ENST00000272342|ETAA1	58.22992032128504	0.22837015374068087	3				NaN	NaN	0	NaN	4226	3818	8045
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8047	25.745	NaN	3818.9	30	0	1218.7	0.106	+			32523	QVQVVLNQK	9	65	528.3144066527244	1054.6142603722487	2	528.3148193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QVQVVLNQK_	ENSG00000140688|ENST00000327237|RUSF1;ENST00000568491.1_1_16:31502158-31504599:-|nuORF;nc|ENSG00000140688|Q96GQ5-2|RUSF1	143.10689835833298	0.00902249513149409	3				NaN	NaN	0	NaN	4227	3818	8045
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8048	25.747	NaN	4290.7	30	0	876.61	0.106			+	38637	SSHTLGSTL	9	63	451.7328412485551	901.4511295639102	2	451.73248291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSHTLGSTL_	REV__ENST00000461275.1_1_7:81680257-81714133:-|nuORF	60.97194046774394	0.20551255781574032	3				NaN	NaN	0	NaN	4228	3818	8045
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8049	25.749	NaN	2921.5	30	0	383.2	0.106	+			42705	TDAVVKHVL	9	64	491.29058959667236	980.5666262601447	2	491.2901916503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TDAVVKHVL_	ENSG00000122218|ENST00000241704|COPA;nc|ENSG00000122218|P53621-2|COPA	51.33545320467046	0.2872990594074956	3				NaN	NaN	0	NaN	4229	3818	8045
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8050	25.751	NaN	7774.5	30	0	2951.9	0.106				-1	 	0	55	392.23303418031537	1173.677273141146	3	392.232666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4230	3818	8045
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8051	25.753	NaN	1160.6	30	0	216.52	0.036	+			1149	AEMRPFIEI	9	50	553.29114370298	1104.5677344727599	2	553.29150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEMRPFIEI_	ENSG00000116984|ENST00000366577|MTR;MTR|p.F598Sfs*14|1|0.12|ENSG00000116984|chr1:236852615-236852615|T/-|frameshift_variant;MTR|p.G1106Wfs*10|1|0.49|ENSG00000116984|chr1:236894464-236894465|-/T|frameshift_variant;MTR|p.R518Gfs*7|1|0.16|ENSG00000116984|chr1:236850378-236850378|C/-|frameshift_variant;MTR|p.T834Nfs*6|1|0.29|ENSG00000116984|chr1:236874751-236874752|-/A|frameshift_variant;nc|ENSG00000116984|Q99707-2|MTR	32.81241826257853	0.4965981579233955	3				NaN	NaN	0	NaN	4231	3818	8045
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8052	25.753	NaN	1061.1	30	0	166.92	0.14	+			1499	AFTSPYINN	9	45	513.7489013671875	NaN	0	513.7489013671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AFTSPYINN_	DNAH6|p.L3633*|2|0.38|ENSG00000115423|chr2:84784749-84784749|T/-|frameshift_variant;DNAH6|p.R2682Kfs*27|1|0.42|ENSG00000115423|chr2:84701316-84701317|-/A|frameshift_variant;DNAH6|p.S3773Lfs*5|1|0.09|ENSG00000115423|chr2:84796377-84796377|T/-|frameshift_variant;ENSG00000115423|ENST00000389394|DNAH6;ENST00000476689.5_1_2:84775422-84811380:+|nuORF;nc|ENSG00000115423|Q9C0G6-3|DNAH6;nc|ENSG00000115423|Q9C0G6-4|DNAH6	29.14955571784316	0.3303970763161698	3				NaN	NaN	0	NaN	4232	3818	8045
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8064	25.78	NaN	7797.5	30	0	1940.1	0.214	+			40292	STSSLFNLQ	9	69	498.7532176252207	995.4918823172414	2	499.25048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STSSLFNLQ_	chr17:58415759-58417017|443|15.45|0.8|4.27|-|ENST00000577716|RNF43,RNF43;ENSG00000108375|ENST00000407977|RNF43;nc|ENSG00000108375|Q68DV7-2|RNF43;nc|ENSG00000108375|Q68DV7-3|RNF43;nc|ENSG00000108375|Q68DV7-4|RNF43;RNF43|p.G659Vfs*41|19|0.36|ENSG00000108375|chr17:58357800-58357800|C/-|frameshift_variant	34.172542307311794	0.4838870758800184	3				NaN	NaN	0	NaN	4241	3821	8063
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8065	25.784	NaN	2962.2	30	0	426.96	0.106	+			7621	DKGAQTGAGL	10	61	459.237548828125	NaN	0	459.237548828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DKGAQTGAGL_	ENSG00000172927|ENST00000441339|MYEOV	39.252832667884924	0.37128895876774715	3				NaN	NaN	0	NaN	4242	3821	8063
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8066	25.786	NaN	14044	30	0	9113.7	0.106	+			30180	PSILSSGNG	9	57	416.2144845074206	830.4144160816412	2	417.2344055175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PSILSSGNG_	ENSG00000183354|ENST00000399933|KIAA2026;ENST00000540714.1_1_9:5919686-5933837:-|nuORF	40.77816245573522	0.41113185337114944	3				NaN	NaN	0	NaN	4243	3821	8063
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8067	25.788	NaN	3290.9	30	0	446.65	0.106			+	24048	LEGQKISL	8	61	444.2636413574219	NaN	0	444.2636413574219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LEGQKISL_	REV__CON__ENSEMBL:ENSBTAP00000037665	84.9155231211612	1.7418937515398478	3				NaN	NaN	0	NaN	4244	3821	8063
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8068	25.79	NaN	1435.9	30	0	200.46	0.106			+	-1	NMEKSLTGK	9	54	512.258544921875	NaN	0	512.258544921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_NM(Oxidation (M))EKSLTGK_	REV__ENSG00000164151|ENST00000296564|ICE1;REV__ICE1|p.H1965Afs*55|1|0.29|ENSG00000164151|chr5:5465219-5465220|-/A|frameshift_variant	44.377184641726394	0.24544280798894275	3				NaN	NaN	0	NaN	4245	3821	8063
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8069	25.791	NaN	1794.6	30	0	152.42	0.035			+	9714	EMLFEKAK	8	55	506.26214599609375	NaN	0	506.26214599609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_EM(Oxidation (M))LFEKAK_	REV__ENSG00000107960|ENST00000224950|STN1;REV__ENST00000466828.5_1_10:105642444-105658073:-|nuORF	60.97194046774394	1.7418937515398478	3				NaN	NaN	0	NaN	4246	3821	8063
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8070	25.792	NaN	1709.4	30	0	262.12	0.14			+	8761	EEGLAEELQ	9	59	509.24261899286637	1016.4706850525328	2	509.2447814941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EEGLAEELQ_	REV__ENST00000486555.5_1_2:25705724-25720338:-|nuORF	40.77816245573522	0.41113185337114944	3				NaN	NaN	0	NaN	4247	3821	8063
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8080	25.907	NaN	13872	30	0	1557.6	0.214	+			40403	STVGAGAYAYK	11	72	544.2747980716368	1086.5350432100736	2	544.2747802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STVGAGAYAYK_	ENSG00000156709|ENST00000287295|AIFM1;nc|ENSG00000156709|O95831-4|AIFM1	180.86945649972546	7.603519634083739E-06	3				NaN	NaN	0	NaN	4254	3824	8079
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8081	25.91	NaN	9756.5	30	0	4391.2	0.106			+	23057	KVTEQTQY	8	74	498.7532176252207	995.4918823172414	2	498.7532043457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVTEQTQY_	REV__ENSG00000051341|ENST00000264233|POLQ;REV__nc|ENSG00000051341|O75417-2|POLQ;REV__POLQ|p.H2496Tfs*59|1|0.11|ENSG00000051341|chr3:121436179-121436179|G/-|frameshift_variant;REV__POLQ|p.K1535Nfs*4|1|0.38|ENSG00000051341|chr3:121488326-121488326|T/-|frameshift_variant;REV__POLQ|p.Y2285Ifs*7|1|0.44|ENSG00000051341|chr3:121467633-121467633|A/-|frameshift_variant	94.00642277110589	0.2653416297186628	3				NaN	NaN	0	NaN	4255	3824	8079
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8082	25.912	NaN	6883.4	30	0	1023.6	0.106			+	2860	ASAPASGTGL	10	61	416.2144845074206	830.4144160816412	2	416.2137451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASAPASGTGL_	REV__ENST00000259351.9_1_9:129677090-129724543:+|nuORF	96.19043198914106	0.09563241103653833	3				NaN	NaN	0	NaN	4256	3824	8079
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8083	25.914	NaN	3485.1	30	0	1393.7	0.106	+			3949	ATATGTEILK	10	57	502.7852490599174	1003.5559451866349	2	502.78448486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATATGTEILK_	ENSG00000159593|ENST00000290810|NAE1;ENST00000562757.5_1_16:66857380-66864856:-|nuORF;ENST00000563419.5_1_16:66858748-66864862:-|nuORF;ENST00000564040.6_1_16:66857135-66864856:-|nuORF;ENST00000569963.1_1_16:66860370-66864856:-|nuORF;nc|ENSG00000159593|Q13564-2|NAE1;nc|ENSG00000159593|Q13564-4|NAE1	65.46538089061403	0.31613324008013116	3				NaN	NaN	0	NaN	4257	3824	8079
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8084	25.916	NaN	2683.8	30	0	214.37	0.106	+			47920	VSLSHPTKQN	10	62	555.7974260399809	1109.5802991467617	2	555.7974243164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSLSHPTKQN_	ENST00000334398.7_1_X:154721001-154721139:-|nuORF	42.86426827375447	0.522752283233888	3				NaN	NaN	0	NaN	4258	3824	8079
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8085	25.918	NaN	2863.5	30	0	535.42	0.034	+			34763	RYGDGGSTF	9	55	480.21512635052034	958.4156997678407	2	480.21405029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RYGDGGSTF_	ENSG00000169045|ENST00000393432|HNRNPH1;ENST00000502904.5_1_5:179043989-179045371:-|nuORF;ENST00000515481.5_1_5:179044503-179045371:-|nuORF	51.19269402634007	0.2889735674168909	3				NaN	NaN	0	NaN	4259	3824	8079
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8086	25.918	NaN	7457	30	0	2012.9	0.144	+			39704	STIPPELVKQK	11	51	413.91566200184093	1238.7251566057228	3	413.9150695800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STIPPELVKQK_	ENSG00000058729|ENST00000283109|RIOK2	35.17822180527639	0.6208003396870814	3				NaN	NaN	0	NaN	4260	3824	8079
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8100	25.949	NaN	4096.6	30	0	536.19	0.214	+			47201	VMAFDCYM	8	53	490.188136737357	978.361720541514	2	490.1878967285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VMAFDCYM_	ENSG00000176200|ENST00000313253|OR4D11	57.452649787351945	0.526999880452039	3				NaN	NaN	0	NaN	4271	3827	8099
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8101	25.953	NaN	7929.2	30	0	812.58	0.106	+			45754	VAEENTRVL	9	65	515.7799399707632	NaN	0	515.78076171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VAEENTRVL_	ENSG00000156256|ENST00000399976|USP16;ENST00000485067.1_1_21:30426080-30426505:+|nuORF;nc|ENSG00000156256|Q9Y5T5-2|USP16;nc|ENSG00000156256|Q9Y5T5-3|USP16;nc|ENSG00000156256|Q9Y5T5-4|USP16	85.86182877749512	0.05129763505578642	3				NaN	NaN	0	NaN	4272	3827	8099
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8102	25.955	NaN	2206.2	30	0	414.98	0.106				-1	LTRPPEAI	8	59	469.76931472904533	937.5240765248907	2	469.76910400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LTRPPEAI_	ENST00000536896.2_1_1:26145941-26146436:-|nuORF	44.116797842482775	0.6307669463330267	3				NaN	NaN	0	NaN	4273	3827	8099
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8103	25.956	NaN	4125.5	30	0	1148	0.106	+			30236	PSSVQLLVT	9	52	472.27721452690975	942.5398761206195	2	472.27728271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PSSVQLLVT_	ENSG00000008869|ENST00000233099|HEATR5B;nc|ENSG00000008869|Q9P2D3-3|HEATR5B	40.77816245573522	0.41113185337114944	3				NaN	NaN	0	NaN	4274	3827	8099
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8104	25.958	NaN	2159.9	30	0	420.65	0.106	+			12897	GESDPMKGV	9	57	460.2133807930929	918.4122086529858	2	460.21343994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GESDPMKGV_	ENSG00000181222|ENST00000674977|POLR2A;nc|ENSG00000181222|P24928|POLR2A	79.71258880314673	0.09879134589249085	3				NaN	NaN	0	NaN	4275	3827	8099
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8105	25.96	NaN	1571.5	30	0	166.7	0.035			+	43241	TEVRQLLE	8	55	494.27740478515625	NaN	0	494.27740478515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TEVRQLLE_	REV__CENPF|p.S2957Afs*6|1|0.52|ENSG00000117724|chr1:214657310-214657310|A/-|frameshift_variant;REV__CENPF|p.T1974Pfs*11|1|0.22|ENSG00000117724|chr1:214645483-214645483|A/-|frameshift_variant;REV__CENPF|p.T2189Hfs*3|1|0.28|ENSG00000117724|chr1:214646131-214646131|A/-|frameshift_variant;REV__ENSG00000117724|ENST00000366955|CENPF	51.33545320467046	1.7418937515398478	3				NaN	NaN	0	NaN	4276	3827	8099
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8106	25.961	NaN	1093.7	30	0	118.83	0.138	+			6	AAAAMNMPS	9	38	440.18869894308784	878.3628449529757	2	440.1886901855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_AAAAM(Oxidation (M))NMPS_	ENSG00000152192|ENST00000377208|POU4F1;nc|ENSG00000152192|Q01851-2|POU4F1	45.9519527083369	0.35044536499095585	3				NaN	NaN	0	NaN	4277	3827	8099
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8115	25.982	NaN	4791.4	30	0	581.05	0.214	+			28210	NAVAGAVKY	9	62	446.7477700924387	NaN	0	446.7476501464844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAVAGAVKY_	ENSG00000030066|ENST00000378460|NUP160;ENST00000529863.1_1_11:47861610-47869870:-|nuORF;nc|ENSG00000030066|Q12769-2|NUP160;nc|ENSG00000030066|Q12769|NUP160	76.7741389293348	0.08243745921263976	3				NaN	NaN	0	NaN	4283	3830	8114
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8116	25.986	NaN	4683.9	30	0	767.73	0.106	+			39179	SSYPVCVSK	9	53	485.23942512829876	968.4642973233975	2	485.23809814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSYPVCVSK_	ENSG00000089127|ENST00000202917|OAS1;ENST00000549820.1_1_12:113344820-113354315:+|nuORF;nc|ENSG00000089127|P00973-2|OAS1;nc|ENSG00000089127|P00973-3|OAS1;nc|ENSG00000089127|P00973-4|OAS1;OAS1|p.N280Tfs*8|1|0.07|ENSG00000089127|chr12:112916689-112916689|A/-|frameshift_variant	42.86426827375447	0.38666266728046506	3				NaN	NaN	0	NaN	4284	3830	8114
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8117	25.988	NaN	5556.3	30	0	1046.9	0.106	+			15805	GVVQPGRSL	9	58	456.7669436546768	911.5193343761537	2	456.76611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GVVQPGRSL_	nc|ENSG00000211955|P01772|IGHV3-33;nc|ENSG00000211955|P0DP02|IGHV3-30-3;nc|ENSG00000270550|P0DP03|IGHV3-30-5	54.776311868738084	0.25715957988447635	3				NaN	NaN	0	NaN	4285	3830	8114
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8118	25.99	NaN	3601.1	30	0	588.49	0.106	+			23949	LDRLTFDY	8	65	521.7642535232015	1041.513954113203	2	521.762451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LDRLTFDY_	ENSG00000015676|ENST00000355451|NUDCD3;ENST00000338427.10_1_7:44425612-44442312:-|nuORF	47.657333605630114	0.6087971902037268	3				NaN	NaN	0	NaN	4286	3830	8114
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8119	25.991	NaN	3169.1	30	0	1177	0.106	+			8797	EEKKIKVIL	9	64	550.3584212167344	1098.7022895002688	2	550.3583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EEKKIKVIL_	ENSG00000162434|ENST00000342505|JAK1;JAK1|p.K860Nfs*16|3|0.29|ENSG00000162434|chr1:64841314-64841314|T/-|frameshift_variant	47.657333605630114	0.33044192980041115	3				NaN	NaN	0	NaN	4287	3830	8114
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8120	25.993	NaN	1795.4	30	0	144.03	0.034	+			51096	YLSINNEV	8	63	476.2434604769735	950.472368020747	2	476.2424621582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YLSINNEV_	ENSG00000197442|ENST00000359015|MAP3K5;MAP3K5|p.A1077Lfs*6|1|0.27|ENSG00000197442|chr6:136583737-136583737|C/-|frameshift_variant;MAP3K5|p.F1132Wfs*8|1|0.09|ENSG00000197442|chr6:136583570-136583571|AA/-|frameshift_variant	53.351449002276354	0.5676011784961348	3				NaN	NaN	0	NaN	4288	3830	8114
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8121	25.994	NaN	1186.2	30	0	106.43	0.139	+			48150	VSYGEGKAL	9	50	462.2452504810969	922.4759480289938	2	462.2452087402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VSYGEGKAL_	ENSG00000181467|ENST00000323534|RAP2B	39.252832667884924	0.4290233611298554	3				NaN	NaN	0	NaN	4289	3830	8114
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8125	26.009	NaN	3925.5	30	0	634.21	0.214	+			9139	EGLRLLLSL	9	62	507.3216377198249	1012.6287225064498	2	507.32122802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EGLRLLLSL_	ENST00000593345.1_1_19:50063082-50063928:-|nuORF;ENST00000598820.5_1_19:50062217-50063928:-|nuORF;ENST00000598839.1_1_19:50062214-50063421:-|nuORF	66.42927471994793	0.16001998865088202	3				NaN	NaN	0	NaN	4290	3833	8124
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8126	26.013	NaN	2726.5	30	0	177.84	0.106			+	47221	VMGLPQILS	9	62	479.2775364745464	956.5405200158929	2	479.2769470214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VMGLPQILS_	REV__E2F8|p.T831Ifs*21|1|0.05|ENSG00000129173|chr11:19224770-19224771|-/TTTAA|frameshift_variant;REV__ENSG00000129173|ENST00000250024|E2F8	64.20726635412375	0.17854274437659667	3				NaN	NaN	0	NaN	4291	3833	8124
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8127	26.015	NaN	2218.7	30	0	576.03	0.106			+	7922	DSFRSDPVHR	10	64	608.2961572132482	1214.5777614932963	2	608.2965087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DSFRSDPVHR_	REV__sp|F5HG51|PRIM_HCMVMDNAprimaseOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL70PE=3SV=1;REV__sp|P17149|PRIM_HCMVADNAprimaseOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL70PE=1SV=2	35.15202426646627	0.5927656479315102	3				NaN	NaN	0	NaN	4292	3833	8124
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8128	26.016	NaN	2143.1	30	0	241.54	0.106			+	46172	VDVLLNGA	8	55	400.7292571848302	NaN	0	400.7289733886719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VDVLLNGA_	REV__AP2A1|p.Q851Rfs*5|1|0.43|ENSG00000196961|chr19:49805672-49805672|C/-|frameshift_variant;REV__ENSG00000196961|ENST00000354293|AP2A1;REV__ENST00000597774.5_1_19:50303271-50309027:+|nuORF;REV__ENST00000600466.1_1_19:50304984-50305399:+|nuORF;REV__nc|ENSG00000196961|O95782|AP2A1	47.91560031466742	1.7418937515398478	3				NaN	NaN	0	NaN	4293	3833	8124
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8129	26.018	NaN	1607.7	30	0	164.65	0.106	+			13947	GSADTIQIGK	10	50	495.2663247178441	NaN	0	495.266357421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GSADTIQIGK_	ENST00000552975.5_1_12:47599848-47610169:-|nuORF	45.02220120713402	0.3370728479115332	3				NaN	NaN	0	NaN	4294	3833	8124
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8130	26.02	NaN	1133.2	30	0	440.64	0.106			+	50973	YIKMRIYK	8	39	557.8269759641918	1113.6393989951835	2	557.8270263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YIKMRIYK_	REV__ENST00000494144.5_1_10:86177532-86230140:+|nuORF	19.359975847455235	0.7988239741663654	3				NaN	NaN	0	NaN	4295	3833	8124
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8131	26.022	NaN	2045.9	30	0	547.36	0.035			+	29880	PLIQSVTHL	9	35	336.5344910216125	1006.5816436650375	3	336.5345153808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PLIQSVTHL_	REV__ENSG00000106278|ENST00000393386|PTPRZ1;REV__nc|ENSG00000106278|P23471-2|PTPRZ1;REV__PTPRZ1|p.R833C|1|0.29|ENSG00000106278|chr7:122011543-122011543|C/T|missense_variant	13.775330524044264	0.6112419832031292	3				NaN	NaN	0	NaN	4296	3833	8124
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8138	26.04	NaN	23228	30	0	2993.7	0.214	+			48501	VTNDGATILK	10	86	516.2898322328597	1030.5651115325193	2	516.2904663085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTNDGATILK_	ENSG00000166226|ENST00000299300|CCT2;ENST00000546859.5_1_12:69979244-69981900:+|nuORF;ENST00000550455.5_1_12:69979244-69981425:+|nuORF;ENST00000550638.5_1_12:69979244-69982049:+|nuORF;ENST00000551620.5_1_12:69979244-69983508:+|nuORF;nc|ENSG00000166226|P78371-2|CCT2	120.63048641472336	0.026439265609364573	3				NaN	NaN	0	NaN	4300	3836	8137
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8139	26.043	NaN	5799.6	30	0	3530	0.106	+			42024	SVYVLVRQK	9	45	364.55759039568585	1090.6509417872576	3	364.557373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVYVLVRQK_	ENSG00000197601|ENST00000354817|FAR1	19.996771675451527	0.6112419832031292	3				NaN	NaN	0	NaN	4301	3836	8137
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8140	26.045	NaN	7174.5	30	0	2054.6	0.106				-1	 	0	63	401.2455542060247	800.4765554788494	2	401.2452087402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4302	3836	8137
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8141	26.047	NaN	1729.1	30	0	98.115	0.106			+	43776	TLINLAQQ	8	57	450.7616742078515	899.508795482503	2	450.7615051269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TLINLAQQ_	REV__ENSG00000005189|ENST00000261377|REXO5;REV__nc|ENSG00000005189|Q96IC2-2|REXO5	60.97194046774394	0.49215940876911696	3				NaN	NaN	0	NaN	4303	3836	8137
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8142	26.049	NaN	1812.7	30	0	272.48	0.106				-1	SEMKKKLK	8	56	504.29780965580244	NaN	0	504.29803466796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_SEM(Oxidation (M))KKKLK_	ENSG00000152818|ENST00000367545|UTRN;nc|ENSG00000152818|P46939-2|UTRN;UTRN|p.G3160*|1|0.03|ENSG00000152818|chr6:144821001-144821002|AG/-|frameshift_variant;UTRN|p.K1847Ffs*66|1|0.07|ENSG00000152818|chr6:144516945-144516946|-/TTTAA|frameshift_variant;UTRN|p.K951Rfs*32|2|0.22|ENSG00000152818|chr6:144461335-144461335|A/-|frameshift_variant;UTRN|p.L985Wfs*4|1|0.07|ENSG00000152818|chr6:144462753-144462754|-/GGGC|frameshift_variant;UTRN|p.R3003Pfs*5|1|0.27|ENSG00000152818|chr6:144793915-144793916|-/C|frameshift_variant;UTRN|p.T2422Hfs*35|1|0.47|ENSG00000152818|chr6:144557282-144557282|A/-|frameshift_variant	38.80614096846853	1.7418937515398478	3				NaN	NaN	0	NaN	4304	3836	8137
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8143	26.051	NaN	1550.4	30	0	201.69	0.106	+			10023	ERTITIEI	8	52	487.7791140576108	NaN	0	487.7798156738281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ERTITIEI_	ENSG00000005302|ENST00000312196|MSL3;ENST00000494268.1_1_X:11778342-11782058:+|nuORF;MSL3|p.P440Qfs*22|1|0.32|ENSG00000005302|chrX:11772188-11772188|C/-|frameshift_variant;nc|ENSG00000005302|Q8N5Y2-2|MSL3;nc|ENSG00000005302|Q8N5Y2-3|MSL3;nc|ENSG00000005302|Q8N5Y2-4|MSL3;nc|ENSG00000005302|Q8N5Y2-5|MSL3;nc|ENSG00000005302|Q8N5Y2-6|MSL3	35.61828744233558	1.7418937515398478	3				NaN	NaN	0	NaN	4305	3836	8137
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8144	26.052	NaN	1131	30	0	111.5	0.033	+			23842	LDAASGGLLA	10	45	444.2449056365375	NaN	0	444.2449645996094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LDAASGGLLA_	ENSG00000167680|ENST00000586582|SEMA6B;nc|ENSG00000167680|Q9H3T3-3|SEMA6B	42.396135135203025	0.3536752194735987	3				NaN	NaN	0	NaN	4306	3836	8137
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8150	26.068	NaN	5956.9	30	0	880.62	0.214			+	2352	AMVLQQNVL	9	73	508.2825279624932	1014.5505029917864	2	508.2827453613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AMVLQQNVL_	REV__ENSG00000182568|ENST00000338745|SATB1;REV__nc|ENSG00000182568|Q01826-2|SATB1;REV__SATB1|p.P626Hfs*81|1|0.31|ENSG00000182568|chr3:18349585-18349585|G/-|frameshift_variant	62.107414245175825	0.1960472003779324	3				NaN	NaN	0	NaN	4309	3839	8149
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8151	26.072	NaN	3214.1	30	0	277.5	0.106			+	18518	ISKRFDDE	8	62	505.2513017861417	1008.4880506390834	2	505.2509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ISKRFDDE_	REV__ENST00000430524.5_1_22:20114727-20114784:+|nuORF	68.484700416344	0.4195245774506064	3				NaN	NaN	0	NaN	4310	3839	8149
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8152	26.074	NaN	6440.1	30	0	901.66	0.106	+			31565	QLNSLWNAI	9	81	529.7868526002005	1057.559152267201	2	529.787353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QLNSLWNAI_	ENSG00000161040|ENST00000440067|FBXL13;nc|ENSG00000161040|Q8NEE6-2|FBXL13;nc|ENSG00000161040|Q8NEE6-3|FBXL13;nc|ENSG00000161040|Q8NEE6-4|FBXL13;nc|ENSG00000161040|Q8NEE6|FBXL13	68.78682469695295	0.14603441672067394	3				NaN	NaN	0	NaN	4311	3839	8149
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8153	26.076	NaN	4276.3	30	0	873.85	0.106			+	25972	LSISAASGTI	10	59	460.25861328765245	918.5026736421049	2	460.25823974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSISAASGTI_	REV__ENSG00000169564|ENST00000303577|PCBP1;REV__ENSG00000197111|ENST00000546463|PCBP2;REV__ENST00000437262.1_1_21:40543078-40543174:-|nuORF;REV__ENST00000517662.1_1_8:75515525-75516083:-|nuORF;REV__ENST00000547048.5_1_12:53862529-53873223:+|nuORF;REV__nc|ENSG00000197111|Q15366-2|PCBP2;REV__nc|ENSG00000197111|Q15366-4|PCBP2;REV__nc|ENSG00000197111|Q15366-5|PCBP2;REV__nc|ENSG00000197111|Q15366-6|PCBP2;REV__nc|ENSG00000197111|Q15366-7|PCBP2;REV__nc|ENSG00000197111|Q15366-8|PCBP2;REV__nc|ENSG00000197111|Q15366|PCBP2	54.776311868738084	0.41334902933431344	3				NaN	NaN	0	NaN	4312	3839	8149
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8154	26.078	NaN	3670.5	30	0	904.73	0.106	+			7458	DFRNALLSL	9	58	524.7929290550682	1047.5713051769362	2	524.7928466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DFRNALLSL_	ENSG00000135046|ENST00000257497|ANXA1;ENST00000489109.1_1_9:75775238-75780181:+|nuORF;ENST00000495713.5_1_9:75775181-75782501:+|nuORF	32.81241826257853	0.4965981579233955	3				NaN	NaN	0	NaN	4313	3839	8149
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8155	26.079	NaN	3527.5	30	0	396.29	0.106	+			45583	TYNQKHSLF	9	64	569.2884547305224	1136.5623565278447	2	569.28857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TYNQKHSLF_	ENSG00000165175|ENST00000614558|MID1IP1	77.31757898189308	0.1091473830098891	3				NaN	NaN	0	NaN	4314	3839	8149
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8156	26.081	NaN	2454.7	30	0	231.49	0.034	+			49950	VYVVAAKR	8	58	453.2816921633748	NaN	0	453.28204345703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VYVVAAKR_	tr|U7SGB4|U7SGB4_FUSNUAcetyl-CoAC-acetyltransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02245PE=3SV=1	29.841539824830324	1.7418937515398478	3				NaN	NaN	0	NaN	4315	3839	8149
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8164	26.099	NaN	4976.3	30	0	603.14	0.214	+			35579	SAYGSVKAY	9	63	473.23808343249556	944.4616139317911	2	473.2373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAYGSVKAY_	ENSG00000182718|ENST00000451270|ANXA2;ENST00000557937.5_1_15:60655071-60678274:-|nuORF;nc|ENSG00000182718|P07355-2|ANXA2;nc|ENSG00000231991|A6NMY6|ANXA2P2;NPTN-ANXA2|1|fusion	72.87924865735499	0.12833875048249987	3				NaN	NaN	0	NaN	4320	3842	8163
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8165	26.103	NaN	4348.2	30	0	728.75	0.106			+	-1	TLTCRSPGVF	10	65	379.86135789595915	1136.5622442880774	3	379.8609619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_TLTC(Carbamidomethyl (C))RSPGVF_	REV__WDR90|p.V858L|1|0.07|ENSG00000161996|chr16:657860-657860|G/T|missense_variant	35.15202426646627	0.5927656479315102	3				NaN	NaN	0	NaN	4321	3842	8163
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8166	26.105	NaN	1933.7	30	0	751.05	0.106			+	17905	IGGLILVPS	9	43	434.78006692090565	NaN	0	434.7799377441406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IGGLILVPS_	REV__CATSPERG|p.P884Qfs*18|1|0.48|ENSG00000099338|chr19:38367188-38367188|C/-|frameshift_variant;REV__ENSG00000099338|ENST00000409235|CATSPERG;REV__ENST00000467739.1_1_19:38837137-38839675:+|nuORF	19.359975847455235	0.3714571876404798	3				NaN	NaN	0	NaN	4322	3842	8163
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8167	26.107	NaN	1583.2	30	0	183.46	0.033			+	23388	LAAEGAGAGVS	11	49	451.7328412485551	901.4511295639102	2	451.7314758300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LAAEGAGAGVS_	REV__ENSG00000159958|ENST00000291232|TNFRSF13C;REV__nc|ENSG00000159958|Q96RJ3-2|TNFRSF13C	34.172542307311794	0.6313490974540716	3				NaN	NaN	0	NaN	4323	3842	8163
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8178	26.13	NaN	9125.2	30	0	2175.1	0.214	+			2448	APIPMVPVGGI	11	53	350.87217574276843	1049.5946978285053	3	350.8717956542969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_APIPMVPVGGI_	ENSG00000010818|ENST00000367603|HIVEP2;HIVEP2|p.E2269Sfs*37|1|0.07|ENSG00000010818|chr6:142753643-142753643|C/-|frameshift_variant;HIVEP2|p.N2325Kfs*44|1|0.35|ENSG00000010818|chr6:142753473-142753474|-/T|frameshift_variant	24.20275056022122	0.7359240821686345	3				NaN	NaN	0	NaN	4331	3845	8177
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8179	26.134	NaN	8853.1	30	0	3311.9	0.106	+			4329	ATGLSGLTK	9	53	424.24813375111415	846.4817145690283	2	424.2475280761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATGLSGLTK_	ENSG00000165949|ENST00000612813|IFI27;nc|ENSG00000165949|P40305-1|IFI27;nc|ENSG00000165949|P40305-3|IFI27;nc|ENSG00000165949|P40305-4|IFI27	126.24258497203832	0.01742065577488747	3				NaN	NaN	0	NaN	4332	3845	8177
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8180	26.136	NaN	7747.5	30	0	886.15	0.106	+			14292	GSVYITLKK	9	76	504.8082246394467	1007.6018963456934	2	504.8077392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GSVYITLKK_	ENSG00000140319|ENST00000267884|SRP14;ENST00000558243.1_1_15:40330963-40331317:-|nuORF;ENST00000558527.5_1_15:40329525-40331317:-|nuORF;ENST00000559475.5_1_15:40329218-40331146:-|nuORF	125.71293069911285	0.017741295328254008	3				NaN	NaN	0	NaN	4333	3845	8177
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8181	26.137	NaN	5415.1	30	0	999.59	0.106	+			47353	VPEEGGATHVY	11	70	579.7751240118735	1157.5356950905468	2	580.2763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VPEEGGATHVY_	ENSG00000166452|ENST00000309377|AKIP1;nc|ENSG00000166452|Q9NQ31-2|AKIP1;nc|ENSG00000166452|Q9NQ31-3|AKIP1	87.69643885390035	0.10820476749497838	3				NaN	NaN	0	NaN	4334	3845	8177
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8182	26.139	NaN	3271.2	30	0	552.89	0.106	+			6304	AVSTLGISK	9	54	438.2636408163384	874.5127286994768	2	438.26318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVSTLGISK_	ENSG00000103160|ENST00000219439|HSDL1;nc|ENSG00000103160|Q3SXM5-2|HSDL1	49.536043120802724	0.308405419312776	3				NaN	NaN	0	NaN	4335	3845	8177
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8183	26.141	NaN	2528	30	0	749.07	0.037				-1	SEDRTMKKN	9	56	562.7713206208351	1123.5280883084702	2	562.7705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_SEDRTM(Oxidation (M))KKN_	ENSG00000082269|ENST00000418814|FAM135A;FAM135A|p.N1165Ifs*3|1|0.07|ENSG00000082269|chr6:70526577-70526578|-/T|frameshift_variant;nc|ENSG00000082269|Q9P2D6-2|FAM135A;nc|ENSG00000082269|Q9P2D6-3|FAM135A;nc|ENSG00000082269|Q9P2D6-4|FAM135A	42.86426827375447	0.38666266728046506	3				NaN	NaN	0	NaN	4336	3845	8177
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8184	26.142	NaN	1589.2	30	0	121.65	0.14			+	2069	ALAPVQPHA	9	56	452.25744399948286	902.5003350657657	2	452.25531005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ALAPVQPHA_	REV__ZBTB20|p.P692Lfs*43|20|0.32|ENSG00000181722|chr3:114339156-114339156|G/-|frameshift_variant	35.200714571348534	0.47427825964483533	3				NaN	NaN	0	NaN	4337	3845	8177
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8190	26.16	NaN	8605.6	30	0	2234.6	0.214				-1	 	0	52	412.2195183724989	822.4244838117978	2	412.21893310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4340	3848	8189
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8191	26.163	NaN	7351	30	0	1909.4	0.106	+			14255	GSSYPVCVSK	10	53	513.7499767412061	1025.485400549212	2	513.7499389648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSSYPVCVSK_	ENSG00000089127|ENST00000202917|OAS1;ENST00000549820.1_1_12:113344820-113354315:+|nuORF;nc|ENSG00000089127|P00973-2|OAS1;nc|ENSG00000089127|P00973-3|OAS1;nc|ENSG00000089127|P00973-4|OAS1;OAS1|p.N280Tfs*8|1|0.07|ENSG00000089127|chr12:112916689-112916689|A/-|frameshift_variant	49.536043120802724	0.461275219792494	3				NaN	NaN	0	NaN	4341	3848	8189
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8192	26.165	NaN	5926.8	30	0	543.11	0.106	+			46315	VEKGHFAEL	9	71	515.2717855686159	NaN	0	515.2717895507812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VEKGHFAEL_	DDX24|p.S507Ffs*17|1|0.26|ENSG00000089737|chr14:94060491-94060492|-/A|frameshift_variant;ENSG00000089737|ENST00000621632|DDX24;ENST00000555762.1_1_14:94524146-94547480:-|nuORF;nc|ENSG00000089737|Q9GZR7-2|DDX24	72.2432373244024	0.09796301979040985	3				NaN	NaN	0	NaN	4342	3848	8189
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8193	26.167	NaN	4875.7	30	0	1113.9	0.106	+			783	AEFAERTVA	9	63	497.2539814733102	992.4934100134204	2	497.2538757324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEFAERTVA_	ENSG00000167460|ENST00000643579|TPM4;ENST00000368528.3_1_3:27674554-27675208:+|nuORF;ENST00000520239.1_1_8:70042334-70042577:+|nuORF;nc|ENSG00000167460|P67936-2|TPM4	93.1432384553994	0.056003526918089595	3				NaN	NaN	0	NaN	4343	3848	8189
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8194	26.169	NaN	2757.3	30	0	227.44	0.106	+			28823	NPLQKDPQY	9	63	551.7799698008853	1101.5453866685705	2	551.7799682617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NPLQKDPQY_	ENSG00000115685|ENST00000234038|PPP1R7;nc|ENSG00000115685|Q15435-2|PPP1R7;PPP1R7|p.R330W|1|0.49|ENSG00000115685|chr2:241182728-241182728|C/T|missense_variant	125.71293069911285	0.017741295328254008	3				NaN	NaN	0	NaN	4344	3848	8189
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8195	26.17	NaN	2474.8	30	0	301.06	0.106	+			44384	TSLGYQVGK	9	55	476.75811773337244	NaN	0	476.7583312988281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TSLGYQVGK_	ENSG00000130803|ENST00000247956|ZNF317;ENST00000590152.1_1_19:9267931-9272106:+|nuORF;nc|ENSG00000130803|Q96PQ6-4|ZNF317;ZNF317|p.E359Rfs*51|1|0.42|ENSG00000130803|chr19:9160716-9160716|G/-|frameshift_variant;ZNF317|p.L487Pfs*6|1|0.3|ENSG00000130803|chr19:9161101-9161104|TATT/-|frameshift_variant	56.72105179125745	0.16330365735109603	3				NaN	NaN	0	NaN	4345	3848	8189
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8196	26.172	NaN	2312.3	30	0	1395.4	0.036			+	-1	VAVPLMGRSN	10	33	353.8579362478015	1058.5519793436044	3	353.8575134277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_VAVPLM(Oxidation (M))GRSN_	REV__ENSG00000197471|ENST00000652691|SPN	24.519189625965996	0.6795976720565101	3				NaN	NaN	0	NaN	4346	3848	8189
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8205	26.192	NaN	6104.7	30	0	768.91	0.214	+			33004	REFGANDNMGA	11	66	591.253836641756	1180.493120350312	2	591.2537231445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_REFGANDNMGA_	ENSG00000162896|ENST00000356495|PIGR	70.41160668669231	0.23230827815249774	3				NaN	NaN	0	NaN	4352	3851	8204
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8206	26.196	NaN	3623.3	30	0	750.37	0.106			+	-1	TSIMLGGCSI	10	66	519.7513224084913	1037.4880918837825	2	519.751708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_TSIMLGGC(Carbamidomethyl (C))SI_	REV__ENST00000456053.5_1_2:179484532-179484628:+|nuORF	42.396135135203025	0.5270658956260207	3				NaN	NaN	0	NaN	4353	3851	8204
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8207	26.198	NaN	4710	30	0	796.36	0.106	+			2464	APLKSKMIY	9	67	525.8037725624671	1049.592992191734	2	525.804443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_APLKSKMIY_	ENSG00000125868|ENST00000246069|DSTN;ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65623104-65623215:-|nuORF;ENST00000602547.1_1_12:6994092-6994545:+|nuORF;nc|ENSG00000125868|P60981-2|DSTN;nc|ENSG00000165410|Q9Y281-3|CFL2	66.42927471994793	0.16001998865088202	3				NaN	NaN	0	NaN	4354	3851	8204
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8208	26.2	NaN	2377.8	30	0	492.55	0.106			+	1594	AGLALFIFLQ	10	60	546.8243461366973	1091.6341393401945	2	547.3040771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AGLALFIFLQ_	REV__ENSG00000124657|ENST00000244623|OR2B6;REV__OR2B6|p.L211*|1|0.37|ENSG00000124657|chr6:27957868-27957868|C/-|frameshift_variant	28.081489160057373	0.6505064946289502	3				NaN	NaN	0	NaN	4355	3851	8204
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8209	26.201	NaN	1753.3	30	0	137.42	0.106			+	31590	QLSPKPLPG	9	53	468.7807938776517	935.5470348221035	2	468.779052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QLSPKPLPG_	REV__ENSG00000088053|ENST00000310373|GP6;REV__nc|ENSG00000088053|Q9HCN6-2|GP6;REV__nc|ENSG00000088053|Q9HCN6|GP6	49.44154591367651	0.3095138337212152	3				NaN	NaN	0	NaN	4356	3851	8204
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8210	26.203	NaN	1840.3	30	0	88.822	0.106	+			4987	ATRSLAWV	8	51	452.25744399948286	902.5003350657657	2	453.2630310058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATRSLAWV_	sp|F5HFH0|US15_HCMVMMembraneproteinUS15OS=Humancytomegalovirus(strainMerlin)OX=295027GN=US15PE=3SV=1;sp|P09718|US15_HCMVAUncharacterizedproteinHVLF3OS=Humancytomegalovirus(strainAD169)OX=10360GN=US15PE=3SV=2	30.503639358989545	0.7238069182250283	3				NaN	NaN	0	NaN	4357	3851	8204
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8211	26.205	NaN	2098.6	30	0	346.61	0.037	+			30106	PRKDAAPALGP	11	33	364.87636617620524	NaN	0	364.8860778808594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PRKDAAPALGP_	ENSG00000183248|ENST00000618550|PRR36;nc|ENSG00000183248|Q9H6K5-2|PRR36	20.030474535948922	0.456735970842152	3				NaN	NaN	0	NaN	4358	3851	8204
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8217	26.221	NaN	3872.6	30	0	1010.7	0.214				-1	 	0	49	407.2405551378909	812.4665573425818	2	407.239990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4361	3854	8216
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8218	26.225	NaN	4581.3	30	0	430.91	0.106	+			32449	QVIVQGVHE	9	68	504.7775417708471	1007.5405306084942	2	504.77691650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QVIVQGVHE_	ENSG00000136682|ENST00000259199|ZNG1B;ENSG00000147996|ENST00000382405|ZNG1E;ENSG00000172785|ENST00000356521|ZNG1A;ENSG00000196873|ENST00000360171|ZNG1C;ENSG00000215126|ENST00000377391|ZNG1F;ENST00000358604.7_1_2:114196636-114253317:+|nuORF;ENST00000382436.3_9:42674366-42714533:+|nuORF;ENST00000456188.5_1_2:114214762-114253317:+|nuORF;ENST00000460896.1_9:42685444-42714533:+|nuORF;ENST00000468061.1_9:69204965-69229730:-|nuORF;ENST00000468763.2_9:69204965-69234056:-|nuORF;ENST00000479583.5_1_2:114228547-114253317:+|nuORF;ENST00000486387.2_9:42689759-42714533:+|nuORF;ENST00000487575.6_1_9:121469-150531:-|nuORF;ENST00000496513.1_9:42713885-42714077:+|nuORF;nc|ENSG00000172785|Q9BRT8-2|ZNG1A;nc|ENSG00000172785|Q9BRT8-3|ZNG1A;nc|ENSG00000196873|Q5JTY5-2|ZNG1C;nc|ENSG00000215126|Q5RIA9-2|ZNG1E;nc|ENSG00000215126|Q5RIA9-3|ZNG1E	45.97224482568171	0.3502073465782774	3				NaN	NaN	0	NaN	4362	3854	8216
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8219	26.227	NaN	5015.4	30	0	797.44	0.106			+	18818	ITVSERTL	8	64	459.7666414731729	917.5187300131458	2	459.7662658691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ITVSERTL_	REV__ENSG00000115825|ENST00000234179|PRKD3;REV__ENST00000464552.1_1_2:37520270-37543499:-|nuORF;REV__ENST00000494667.5_1_2:37496701-37543667:-|nuORF;REV__nc|ENSG00000115825|O94806-2|PRKD3	68.78682469695295	0.41700713582915416	3				NaN	NaN	0	NaN	4363	3854	8216
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8220	26.228	NaN	2349.8	30	0	181.41	0.106	+			12656	GEIQAGAKL	9	51	443.7536479872261	885.4927430412522	2	443.7530212402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEIQAGAKL_	DYNC1I2|p.F272Lfs*47|1|0.14|ENSG00000077380|chr2:171726234-171726234|T/-|frameshift_variant;ENSG00000077380|ENST00000397119|DYNC1I2;ENST00000435916.1_1_10:52025279-52025462:+|nuORF;nc|ENSG00000077380|Q13409-2|DYNC1I2;nc|ENSG00000077380|Q13409-3|DYNC1I2;nc|ENSG00000077380|Q13409-5|DYNC1I2;nc|ENSG00000077380|Q13409-6|DYNC1I2;nc|ENSG00000077380|Q13409-7|DYNC1I2	60.11826168202944	0.21262886028301267	3				NaN	NaN	0	NaN	4364	3854	8216
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8221	26.23	NaN	1463.6	30	0	214.22	0.106	+			29384	PAPAANPPA	9	45	403.21428572534074	804.4140185174815	2	403.21392822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PAPAANPPA_	ENSG00000128283|ENST00000249014|CDC42EP1;nc|ENSG00000128283|Q00587-2|CDC42EP1	26.79610172149135	0.5528238334041078	3				NaN	NaN	0	NaN	4365	3854	8216
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8222	26.232	NaN	2989.2	30	0	944.54	0.106	+			34975	SAAPPGAWPW	10	45	347.1711936192659	NaN	0	346.83648681640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SAAPPGAWPW_	ENSG00000237412|ENST00000617714|PRSS56	36.446750945000026	0.3805027428805705	3				NaN	NaN	0	NaN	4366	3854	8216
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8223	26.234	NaN	3334.1	30	0	1172.9	0.036			+	7661	DKTVDERSM	9	61	540.7536685755387	1079.4927842178772	2	540.7535400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DKTVDERSM_	REV__ENSG00000107186|ENST00000319217|MPDZ;REV__MPDZ|p.K1582Rfs*7|1|0.22|ENSG00000107186|chr9:13125278-13125278|T/-|frameshift_variant;REV__nc|ENSG00000107186|O75970-2|MPDZ;REV__nc|ENSG00000107186|O75970-3|MPDZ;REV__nc|ENSG00000107186|O75970-5|MPDZ	42.86426827375447	0.38666266728046506	3				NaN	NaN	0	NaN	4367	3854	8216
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8231	26.252	NaN	10792	30	0	5062	0.214	+			27502	MMMLQNILQ	9	63	379.8528083313706	1136.5365955943118	3	379.8523864746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_MMM(Oxidation (M))LQNILQ_	ENSG00000173226|ENST00000310864|IQCB1;nc|ENSG00000173226|Q15051-2|IQCB1;nc|ENSG00000173226|Q15051-3|IQCB1	47.657333605630114	0.33044192980041115	3				NaN	NaN	0	NaN	4372	3857	8230
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8232	26.255	NaN	3121.9	30	0	906.44	0.106			+	40625	SVAKVKET	8	59	431.2560337433648	860.4975145535296	2	431.2552490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVAKVKET_	REV__tr|U7SXI5|U7SXI5_FUSNUDihydroorotatedehydrogenaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=pyrDPE=3SV=1	27.882242232435846	0.7440473649773525	3				NaN	NaN	0	NaN	4373	3857	8230
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8233	26.257	NaN	3148.9	30	0	428.49	0.106			+	-1	TVTIMKDKL	9	50	355.5380581264604	1063.5923449795812	3	355.53759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_TVTIM(Oxidation (M))KDKL_	REV__ENSG00000100150|ENST00000651528|DEPDC5;REV__nc|ENSG00000100150|O75140-1|DEPDC5;REV__nc|ENSG00000100150|O75140-4|DEPDC5;REV__nc|ENSG00000100150|O75140-5|DEPDC5;REV__nc|ENSG00000100150|O75140-6|DEPDC5;REV__nc|ENSG00000100150|O75140-8|DEPDC5;REV__nc|ENSG00000100150|O75140-9|DEPDC5	30.317721548370564	0.5199124245378496	3				NaN	NaN	0	NaN	4374	3857	8230
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8234	26.259	NaN	2839.4	30	0	227.01	0.106	+			7275	DANRQISEY	9	61	548.2570735937801	1094.49959425436	2	548.25634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DANRQISEY_	ENSG00000093167|ENST00000336686|LRRFIP2;ENST00000496479.5_1_3:37095344-37107514:-|nuORF;LRRFIP2|p.V671Sfs*2|1|0.12|ENSG00000093167|chr3:37054455-37054456|-/T|frameshift_variant;nc|ENSG00000093167|Q9Y608-2|LRRFIP2;nc|ENSG00000093167|Q9Y608-3|LRRFIP2;nc|ENSG00000093167|Q9Y608-4|LRRFIP2;nc|ENSG00000093167|Q9Y608-5|LRRFIP2	67.49366992349736	0.1516260258713357	3				NaN	NaN	0	NaN	4375	3857	8230
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8235	26.261	NaN	2653.4	30	0	363.28	0.106	+			11709	FSAESSRSL	9	57	492.2436450868478	982.4727372404956	2	492.2420349121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FSAESSRSL_	DOCK7|p.F1836Dfs*12|1|0.05|ENSG00000116641|chr1:62477795-62477796|-/TGTC|frameshift_variant;ENSG00000116641|ENST00000635253|DOCK7;nc|ENSG00000116641|Q96N67-2|DOCK7;nc|ENSG00000116641|Q96N67-3|DOCK7;nc|ENSG00000116641|Q96N67-4|DOCK7;nc|ENSG00000116641|Q96N67-5|DOCK7;nc|ENSG00000116641|Q96N67-6|DOCK7	63.53385203322761	0.18415635464017938	3				NaN	NaN	0	NaN	4376	3857	8230
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8236	26.263	NaN	1654.1	30	0	162.61	0.034			+	35050	SAEPLPSGLG	10	56	464.2430128372094	926.4714727412188	2	464.2425231933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SAEPLPSGLG_	REV__ENST00000550376.5_1_12:108154376-108155011:-|nuORF	35.61828744233558	0.588957954432594	3				NaN	NaN	0	NaN	4377	3857	8230
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8237	26.263	NaN	1402.6	30	0	109.22	0.139			+	50074	WGAMWLTI	8	51	489.24800250376023	NaN	0	489.2483215332031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_WGAMWLTI_	REV__ENSG00000085871|ENST00000265498|MGST2;REV__MGST2|p.K103Nfs*8|2|0.22|ENSG00000085871|chr4:139703529-139703529|A/-|frameshift_variant	33.51558372728122	1.7418937515398478	3				NaN	NaN	0	NaN	4378	3857	8230
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8250	26.292	NaN	3973.5	30	0	291.61	0.214	+			24464	LGFTQSQIDE	10	64	569.2757878283571	1136.5370227235142	2	569.2763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LGFTQSQIDE_	ENSG00000137275|ENST00000259808|RIPK1;nc|ENSG00000137275|Q13546-2|RIPK1	65.15724298150197	0.31893571707528906	3				NaN	NaN	0	NaN	4388	3860	8249
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8251	26.296	NaN	2666.2	30	0	245.8	0.106	+			27951	MVIACLALAG	10	66	509.7750291799924	1017.5355054267848	2	509.77520751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_MVIAC(Carbamidomethyl (C))LALAG_	ENST00000446877.5_2_2:190649287-190649320:+|nuORF	77.94384346573518	0.21241958424364343	3				NaN	NaN	0	NaN	4389	3860	8249
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8252	26.298	NaN	1789.2	30	0	126.57	0.106	+			36953	SILRNPVTNK	10	64	571.3382730379692	1140.6619931427383	2	571.33837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SILRNPVTNK_	ENSG00000131876|ENST00000254193|SNRPA1;ENST00000558036.5_1_15:101827046-101835383:-|nuORF;ENST00000558059.5_1_15:101827046-101835071:-|nuORF	56.632244143249146	0.3964695498866976	3				NaN	NaN	0	NaN	4390	3860	8249
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8253	26.299	NaN	1825.9	30	0	268.89	0.106	+			33180	REVEARYAL	9	65	553.8015415423226	1105.5885301514452	2	553.8015747070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_REVEARYAL_	ENSG00000111057|ENST00000388835|KRT18;ENST00000411618.1_1_9:30799684-30799825:-|nuORF;ENST00000549078.5_1_12:53344429-53346127:+|nuORF	49.44154591367651	0.3095138337212152	3				NaN	NaN	0	NaN	4391	3860	8249
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8254	26.301	NaN	1190.3	30	0	230.28	0.106			+	24554	LGLTAAAGLAP	11	54	477.78395945296603	NaN	0	477.78411865234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LGLTAAAGLAP_	REV__LCE2B|p.P13Lfs*61|1|0.24|ENSG00000159455|chr1:152686877-152686877|C/-|frameshift_variant;REV__LCE2B|p.Q35Sfs*39|1|0.2|ENSG00000159455|chr1:152686943-152686943|C/-|frameshift_variant	42.396135135203025	0.3699325281549567	3				NaN	NaN	0	NaN	4392	3860	8249
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8255	26.303	NaN	1329.7	30	0	96.544	0.036			+	48416	VTILPEAPPQ	10	60	532.8032563400583	1063.5919597469165	2	533.3054809570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTILPEAPPQ_	REV__ADGRB2|p.L1141Cfs*35|1|0.34|ENSG00000121753|chr1:31735214-31735214|G/-|frameshift_variant;REV__ENSG00000121753|ENST00000373658|ADGRB2;REV__nc|ENSG00000121753|O60241-2|ADGRB2;REV__nc|ENSG00000121753|O60241-3|ADGRB2;REV__nc|ENSG00000121753|O60241-4|ADGRB2	27.882242232435846	0.6521336255503853	3				NaN	NaN	0	NaN	4393	3860	8249
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8256	26.304	NaN	7373.8	30	0	2450.8	0.145	+			17739	IEQEEKILK	9	54	377.22022760006513	1128.6388534003954	3	377.2200622558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IEQEEKILK_	ENSG00000175820|ENST00000322527|CCDC168	44.377184641726394	0.36891676396732553	3				NaN	NaN	0	NaN	4394	3860	8249
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8268	26.331	NaN	11714	30	0	8816	0.214				-1	 	0	35	322.1938065663663	642.3730601995326	2	322.1935729980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4403	3863	8267
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8269	26.334	NaN	3408.6	30	0	346.2	0.106	+			35146	SAIASTKVM	9	57	454.2497967206789	906.4850405081578	2	454.24908447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAIASTKVM_	ENSG00000104442|ENST00000276569|ARMC1;nc|ENSG00000104442|Q9NVT9-2|ARMC1	58.22992032128504	0.22837015374068087	3				NaN	NaN	0	NaN	4404	3863	8267
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8270	26.336	NaN	2840.8	30	0	303.14	0.106			+	28894	NQKHRTSK	8	64	499.77764972431874	NaN	0	499.77899169921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NQKHRTSK_	REV__ENSG00000075292|ENST00000264447|ZNF638;REV__ENST00000460310.1_1_2:71658536-71660440:+|nuORF;REV__nc|ENSG00000075292|Q14966-3|ZNF638;REV__nc|ENSG00000075292|Q14966-5|ZNF638	51.33545320467046	1.7418937515398478	3				NaN	NaN	0	NaN	4405	3863	8267
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8271	26.338	NaN	3029.1	30	0	381.3	0.106	+			20196	KELEGKINSL	10	68	565.8249028293085	1129.6352527254169	2	565.8250122070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KELEGKINSL_	ENSG00000135968|ENST00000309863|GCC2;GCC2|p.L712Cfs*16|1|0.49|ENSG00000135968|chr2:108471458-108471458|T/-|frameshift_variant	84.31045756130733	0.1636476603981187	3				NaN	NaN	0	NaN	4406	3863	8267
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8272	26.34	NaN	1255.7	30	0	94.342	0.106				-1	MMILMSPTV	9	59	527.752063167352	NaN	0	527.7532958984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Oxidation (M)	_MM(Oxidation (M))ILM(Oxidation (M))SPTV_	ENST00000464326.1_1_9:19116607-19118356:-|nuORF	53.351449002276354	0.18359631779194618	3				NaN	NaN	0	NaN	4407	3863	8267
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8273	26.342	NaN	2382	30	0	550.11	0.034			+	38544	SSEEGHSDL	9	60	480.699407342607	959.384261752014	2	480.6988220214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSEEGHSDL_	REV__ENSG00000179562|ENST00000321407|GCC1;REV__GCC1|p.T633Afs*8|1|0.05|ENSG00000179562|chr7:127582446-127582447|-/CA|frameshift_variant	37.15910966729921	0.4535818937225704	3				NaN	NaN	0	NaN	4408	3863	8267
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8274	26.342	NaN	1269.5	30	0	142.92	0.14	+			9164	EGPARKGAAAI	11	51	520.7947998046875	NaN	0	520.7947998046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EGPARKGAAAI_	ENSG00000103335|ENST00000301015|PIEZO1;PIEZO1|p.A2395Pfs*117|1|0.37|ENSG00000103335|chr16:88716061-88716067|CCCCGCA/-|frameshift_variant;PIEZO1|p.F1977Lfs*33|1|0.38|ENSG00000103335|chr16:88720403-88720403|A/-|frameshift_variant	37.81151784470057	0.3969060959064013	3				NaN	NaN	0	NaN	4409	3863	8267
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8281	26.36	NaN	3605	30	0	450.58	0.214	+			12742	GELAIKDANA	10	64	501.26697196157005	1000.5193909899401	2	501.26666259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GELAIKDANA_	CON__H-INV:HIT000292931;CON__P05787;CON__REFSEQ:XP_092267;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;ENST00000547031.5_1_12:53292389-53294972:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	65.15724298150197	0.31893571707528906	3				NaN	NaN	0	NaN	4413	3866	8280
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8282	26.364	NaN	2544.3	30	0	520	0.106	+			28678	NLVQEWLAK	9	55	550.8073696236959	NaN	0	550.8073120117188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NLVQEWLAK_	ENSG00000163283|ENST00000392027|ALPP;ENSG00000163286|ENST00000295453|ALPG;ENSG00000163295|ENST00000295463|ALPI	33.921630207806714	0.3063038642147651	3				NaN	NaN	0	NaN	4414	3866	8280
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8283	26.366	NaN	2375.1	30	0	420.6	0.106			+	37650	SLQQSKVPF	9	56	517.28755713753	1032.56056134186	2	517.2871704101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLQQSKVPF_	REV__CKAP2L|p.T478Pfs*15|1|0.25|ENSG00000169607|chr2:112752437-112752437|T/-|frameshift_variant;REV__CKAP2L|p.T618Lfs*3|1|0.37|ENSG00000169607|chr2:112740978-112740978|T/-|frameshift_variant;REV__ENSG00000169607|ENST00000302450|CKAP2L;REV__nc|ENSG00000169607|Q8IYA6-3|CKAP2L	40.05817265558897	0.419577045485086	3				NaN	NaN	0	NaN	4415	3866	8280
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8284	26.368	NaN	2720.1	30	0	335.17	0.106			+	37732	SLTKAPIHSF	10	36	367.54053870341306	1099.5997867104393	3	367.5400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLTKAPIHSF_	REV__ENSG00000118200|ENST00000358823|CAMSAP2;REV__nc|ENSG00000118200|Q08AD1-2|CAMSAP2;REV__nc|ENSG00000118200|Q08AD1|CAMSAP2	41.42661286455405	0.5359995577334734	3				NaN	NaN	0	NaN	4416	3866	8280
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8285	26.37	NaN	1513.8	30	0	118.85	0.106	+			33187	REVKQKISP	9	57	542.8279223996759	1083.6412918661517	2	542.8265991210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_REVKQKISP_	ENSG00000198690|ENST00000362065|FAN1;nc|ENSG00000198690|Q9Y2M0-2|FAN1	41.42661286455405	0.403525789677298	3				NaN	NaN	0	NaN	4417	3866	8280
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8286	26.371	NaN	1356.2	30	0	124.46	0.035	+			25636	LQRLCYMG	8	58	492.2436450868478	982.4727372404956	2	492.74481201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LQRLCYMG_	ENSG00000077235|ENST00000356183|GTF3C1;GTF3C1|p.L1167Sfs*9|1|0.07|ENSG00000077235|chr16:27488566-27488566|G/-|frameshift_variant;GTF3C1|p.P1914Qfs*30|1|0.16|ENSG00000077235|chr16:27464451-27464451|G/-|frameshift_variant;GTF3C1|p.V2028Sfs*25|1|0.14|ENSG00000077235|chr16:27462329-27462329|C/-|frameshift_variant;nc|ENSG00000077235|Q12789-3|GTF3C1	37.028477286268924	0.6747514403204248	3				NaN	NaN	0	NaN	4418	3866	8280
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8294	26.39	NaN	8312	30	0	1843.7	0.214			+	22254	KTAQVSIFENY	11	64	433.89104378421564	1298.651301952847	3	433.89093017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTAQVSIFENY_	REV__ENSG00000117152|ENST00000367909|RGS4;REV__ENST00000491263.1_1_1:163042508-163043577:+|nuORF;REV__nc|ENSG00000117152|P49798-2|RGS4;REV__nc|ENSG00000117152|P49798-3|RGS4;REV__nc|ENSG00000117152|P49798-5|RGS4	51.52775601994872	0.4002081502334604	3				NaN	NaN	0	NaN	4423	3869	8293
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8295	26.393	NaN	4001.1	30	0	558.76	0.106	+			35816	SEARIQQL	8	66	472.7620961729556	943.5096394127112	2	472.7615661621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEARIQQL_	ENSG00000100242|ENST00000689035|SUN2;ENST00000469086.5_1_22:39136824-39138467:-|nuORF;ENST00000477262.5_1_22:39135390-39138407:-|nuORF;nc|ENSG00000100242|Q9UH99-2|SUN2;nc|ENSG00000100242|Q9UH99-3|SUN2	42.396135135203025	0.6414440140393314	3				NaN	NaN	0	NaN	4424	3869	8293
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8296	26.395	NaN	2414.4	30	0	161.64	0.106	+			51572	YYKSTSSAF	9	57	527.2483550252917	NaN	0	527.2482299804688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YYKSTSSAF_	ENSG00000197093|ENST00000360039|GAL3ST4;ENST00000423751.2_1_7:99757553-99764836:-|nuORF;GAL3ST4|p.F427Sfs*17|1|0.32|ENSG00000197093|chr7:100160111-100160111|G/-|frameshift_variant;nc|ENSG00000197093|Q96RP7-2|GAL3ST4	82.24051045832904	0.06370642293906256	3				NaN	NaN	0	NaN	4425	3869	8293
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8297	26.397	NaN	2358.2	30	0	446.16	0.106			+	28623	NKVDSITLK	9	70	509.3001249830342	1016.5856970328684	2	509.3000793457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NKVDSITLK_	REV__tr|U7T586|U7T586_FUSNUDNApolymeraseIIIsubunitgamma/tauOS=FusobacteriumnucleatumCTI-5OX=1316586GN=dnaXPE=3SV=1	47.657333605630114	0.33044192980041115	3				NaN	NaN	0	NaN	4426	3869	8293
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8298	26.399	NaN	1076.9	30	0	187.42	0.106			+	29437	PCHKITCKH	9	50	533.7677001953125	NaN	0	533.7677001953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PCHKITCKH_	REV__ENSG00000104447|ENST00000395715|TRPS1;REV__nc|ENSG00000104447|Q9UHF7-3|TRPS1;REV__nc|ENSG00000104447|Q9UHF7|TRPS1;REV__TRPS1|p.N1193Mfs*5|1|0.3|ENSG00000104447|chr8:115414291-115414291|T/-|frameshift_variant;REV__TRPS1|p.N1276Kfs*5|1|0.21|ENSG00000104447|chr8:115414041-115414042|-/T|frameshift_variant	32.81241826257853	0.3119040447479903	3				NaN	NaN	0	NaN	4427	3869	8293
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8299	26.401	NaN	3430.8	30	0	471.1	0.036	+			22056	KSKFFEDSE	9	68	558.7647448923158	1115.5149368514315	2	558.7645263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KSKFFEDSE_	ENSG00000115241|ENST00000344034|PPM1G;ENST00000472077.1_1_2:27604468-27607956:-|nuORF;PPM1G|p.G393Afs*25|1|0.08|ENSG00000115241|chr2:27383389-27383389|C/-|frameshift_variant;PPM1G|p.S354Lfs*7|1|0.39|ENSG00000115241|chr2:27383508-27383508|T/-|frameshift_variant	34.172542307311794	0.4838870758800184	3				NaN	NaN	0	NaN	4428	3869	8293
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8300	26.401	NaN	1654.3	30	0	407.62	0.14			+	22425	KTKYVQQI	8	52	504.29780965580244	NaN	0	504.2970275878906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KTKYVQQI_	REV__ENSG00000178279|ENST00000312693|TNP2	55.50420428727701	1.7418937515398478	3				NaN	NaN	0	NaN	4429	3869	8293
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8307	26.421	NaN	5066.5	30	0	658.58	0.214			+	37008	SIQEKLLCI	9	74	523.7991651884515	1045.583777443703	2	523.7994995117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIQEKLLCI_	REV__ENSG00000141524|ENST00000590602|TMC6;REV__nc|ENSG00000141524|Q7Z403-3|TMC6	101.60071028292904	0.0375685401170269	3				NaN	NaN	0	NaN	4433	3872	8306
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8308	26.424	NaN	2476.1	30	0	333.91	0.106	+			46468	VETEIQRV	8	57	487.26964111092957	972.5247292886592	2	487.26910400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VETEIQRV_	AMOT|p.L850Cfs*59|1|0.13|ENSG00000126016|chrX:112779606-112779606|G/-|frameshift_variant;ENSG00000126016|ENST00000371959|AMOT;nc|ENSG00000126016|Q4VCS5-2|AMOT	71.87747018426188	0.391254423828572	3				NaN	NaN	0	NaN	4434	3872	8306
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8309	26.426	NaN	2453	30	0	301.96	0.106	+			1184	AENLLKPI	8	58	449.2741293477996	896.5337057623992	2	449.27374267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AENLLKPI_	ENSG00000239961|ENST00000291759|LILRA4;LILRA4|p.A360Qfs*8|1|0.17|ENSG00000239961|chr19:54337018-54337018|C/-|frameshift_variant;LILRA4|p.S309Qfs*2|1|0.4|ENSG00000239961|chr19:54337427-54337428|-/G|frameshift_variant	45.9519527083369	0.6193794311207887	3				NaN	NaN	0	NaN	4435	3872	8306
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8310	26.428	NaN	1894.4	30	0	319.72	0.106			+	23774	LCKVSVVK	8	56	438.2708898296682	NaN	0	438.27099609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LCKVSVVK_	REV__ENSG00000197548|ENST00000693202|ATG7;REV__ENST00000460291.1_1_3:11383675-11389548:+|nuORF;REV__ENST00000478638.5_1_3:11372879-11389427:+|nuORF;REV__nc|ENSG00000197548|O95352-2|ATG7;REV__nc|ENSG00000197548|O95352-3|ATG7	23.04248740728303	1.7418937515398478	3				NaN	NaN	0	NaN	4436	3872	8306
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8311	26.43	NaN	1601.7	30	0	161.1	0.106	+			16333	HEKQVYDIAA	10	58	587.2987688965397	1172.5829848598794	2	587.2984008789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HEKQVYDIAA_	ENSG00000018510|ENST00000264167|AGPS	41.42661286455405	0.5359995577334734	3				NaN	NaN	0	NaN	4437	3872	8306
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8312	26.432	NaN	1475.9	30	0	279.69	0.106	+			3547	ASTGHLLVPI	10	31	336.5344910216125	1006.5816436650375	3	336.5342712402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASTGHLLVPI_	ENSG00000113555|ENST00000231484|PCDH12;PCDH12|p.E593K|1|0.37|ENSG00000113555|chr5:141956075-141956075|C/T|missense_variant;PCDH12|p.L685Yfs*7|3|0.18|ENSG00000113555|chr5:141955800-141955800|G/-|frameshift_variant	17.364965105453717	0.7282106878714807	3				NaN	NaN	0	NaN	4438	3872	8306
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8313	26.433	NaN	1513.7	30	0	204.92	0.035	+			26584	LTTTSRAEF	9	56	513.2668179281071	1024.5190829230141	2	513.2667846679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LTTTSRAEF_	ENSG00000156531|ENST00000370803|PHF6;nc|ENSG00000156531|Q8IWS0-2|PHF6;nc|ENSG00000156531|Q8IWS0-3|PHF6;nc|ENSG00000156531|Q8IWS0-4|PHF6;nc|ENSG00000156531|Q8IWS0-5|PHF6	39.252832667884924	0.4290233611298554	3				NaN	NaN	0	NaN	4439	3872	8306
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8318	26.448	NaN	5358.9	30	0	1202.7	0.214	+			41990	SVYGYGVQK	9	57	500.759003643531	999.503454353862	2	500.75836181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVYGYGVQK_	ENSG00000107164|ENST00000319725|FUBP3;FUBP3|p.P395Lfs*27|2|0.27|ENSG00000107164|chr9:130630689-130630689|C/-|frameshift_variant	82.24051045832904	0.08786059719216216	3				NaN	NaN	0	NaN	4441	3875	8317
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8319	26.451	NaN	2930.7	30	0	453.56	0.106	+			6436	AVYADSGNFK	10	63	536.2597799867486	1070.5050070402972	2	536.2593994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVYADSGNFK_	ENSG00000145780|ENST00000274457|FEM1C	66.96192283764107	0.30252237217063654	3				NaN	NaN	0	NaN	4442	3875	8317
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8320	26.453	NaN	2511.5	30	0	313.84	0.106	+			30371	PVIKLQAP	8	51	433.2787171536517	NaN	0	433.27886962890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PVIKLQAP_	ENSG00000165501|ENST00000298288|LRR1;ENST00000540712.1_1_14:50068361-50081211:+|nuORF	44.53106598305862	1.7418937515398478	3				NaN	NaN	0	NaN	4443	3875	8317
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8321	26.455	NaN	1829.2	30	0	188.5	0.106	+			8528	EAVDIRQI	8	57	472.26426199703985	NaN	0	472.2648620605469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EAVDIRQI_	ENSG00000197905|ENST00000359864|TEAD4;nc|ENSG00000197905|Q15561-2|TEAD4;nc|ENSG00000197905|Q15561-3|TEAD4	45.9519527083369	1.7418937515398478	3				NaN	NaN	0	NaN	4444	3875	8317
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8322	26.457	NaN	2182.3	30	0	319.4	0.037	+			18498	ISHLMSSQDK	10	63	573.2848970012743	1144.5552410693485	2	573.2847900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ISHLMSSQDK_	ENST00000586898.1_1_17:49269519-49270175:-|nuORF	44.377184641726394	0.5088115166961078	3				NaN	NaN	0	NaN	4445	3875	8317
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8330	26.475	NaN	6787	30	0	1138.8	0.214	+			24064	LEKAENQVL	9	62	522.2903726257055	1042.5661923182108	2	522.2904052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LEKAENQVL_	ENSG00000185825|ENST00000345046|BCAP31;ENST00000563143.2_1_16:32882346-32883351:+|nuORF;nc|ENSG00000185825|P51572-2|BCAP31	109.47833844074708	0.029530294723441826	3				NaN	NaN	0	NaN	4450	3878	8329
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8331	26.479	NaN	2164.2	30	0	223.54	0.106	+			12728	GEKTVAAVM	9	58	453.241805007437	904.469057081674	2	453.2413330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEKTVAAVM_	EMC1|p.F608Lfs*7|1|0.38|ENSG00000127463|chr1:19231381-19231381|A/-|frameshift_variant;EMC1|p.F974Lfs*4|1|0.22|ENSG00000127463|chr1:19219363-19219363|A/-|frameshift_variant;ENSG00000127463|ENST00000477853|EMC1;ENST00000467423.1_1_1:19565574-19565811:-|nuORF;nc|ENSG00000127463|Q8N766-2|EMC1;nc|ENSG00000127463|Q8N766-3|EMC1;nc|ENSG00000127463|Q8N766-4|EMC1	29.170058357718403	0.5306379469863586	3				NaN	NaN	0	NaN	4451	3878	8329
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8332	26.481	NaN	1704.1	30	0	190.94	0.106	+			48323	VTFPQAYP	8	48	461.7354795840643	921.4564062349286	2	461.73480224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTFPQAYP_	ENST00000551296.5_1_12:56330167-56330479:+|nuORF	47.91560031466742	0.6071945918984287	3				NaN	NaN	0	NaN	4452	3878	8329
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8333	26.482	NaN	1786.1	30	0	264.05	0.106	+			47354	VPEEGGATHVY	11	59	579.7751240118735	1157.5356950905468	2	579.7755737304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VPEEGGATHVY_	ENSG00000166452|ENST00000309377|AKIP1;nc|ENSG00000166452|Q9NQ31-2|AKIP1;nc|ENSG00000166452|Q9NQ31-3|AKIP1	23.52269567125451	0.7430573033454468	3				NaN	NaN	0	NaN	4453	3878	8329
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8334	26.484	NaN	1406.8	30	0	497.2	0.106			+	11110	FFLPRDER	8	48	540.2841044497075	NaN	0	540.2852783203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FFLPRDER_	REV__ENSG00000196208|ENST00000381486|GREB1;REV__nc|ENSG00000196208|Q4ZG55-4|GREB1	15.641811463095205	1.7418937515398478	3				NaN	NaN	0	NaN	4454	3878	8329
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8335	26.486	NaN	1377.1	30	0	155.28	0.034			+	34003	RSHTATVR	8	45	464.2580376095475	926.501522285895	2	464.2575988769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RSHTATVR_	REV__ENST00000429642.1_3_10:1094229-1094346:-|nuORF	26.69291269510374	0.7532304684939817	3				NaN	NaN	0	NaN	4455	3878	8329
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8344	26.506	NaN	2588.4	30	0	607.15	0.214	+			13951	GSAFSTSISK	10	54	492.75388677591275	983.4932206186255	2	492.7535705566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSAFSTSISK_	ENSG00000179115|ENST00000314606|FARSA;ENST00000592662.5_1_19:13039347-13044510:-|nuORF	56.632244143249146	0.3964695498866976	3				NaN	NaN	0	NaN	4461	3881	8343
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8345	26.509	NaN	2200.4	30	0	145.35	0.106	+			8112	DYMKTTSNF	9	74	561.7424580896113	1121.4703632460225	2	561.742919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_DYM(Oxidation (M))KTTSNF_	ENSG00000165525|ENST00000298310|NEMF;nc|ENSG00000165525|O60524-3|NEMF;nc|ENSG00000165525|O60524-4|NEMF;NEMF|p.K641Rfs*9|1|0.15|ENSG00000165525|chr14:49802721-49802721|T/-|frameshift_variant;NEMF|p.M879*|1|0.12|ENSG00000165525|chr14:49789558-49789558|T/-|frameshift_variant;NEMF|p.M879Nfs*10|1|0.13|ENSG00000165525|chr14:49789557-49789558|-/T|frameshift_variant	96.66504779109242	0.04607440320619715	3				NaN	NaN	0	NaN	4462	3881	8343
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8346	26.511	NaN	1363.9	30	0	123.29	0.106				-1	 	0	56	503.25390391294843	502.24662744634844	1	503.2543029785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4463	3881	8343
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8347	26.513	NaN	1695.9	30	0	470.19	0.036			+	-1	RLVISMSKL	9	32	354.8821019411391	NaN	0	354.88165283203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_RLVISM(Oxidation (M))SKL_	REV__ENSG00000197969|ENST00000360280|VPS13A;REV__nc|ENSG00000197969|Q96RL7-2|VPS13A;REV__nc|ENSG00000197969|Q96RL7-3|VPS13A;REV__nc|ENSG00000197969|Q96RL7-4|VPS13A;REV__VPS13A|p.I1709Nfs*6|1|0.34|ENSG00000197969|chr9:77318397-77318398|-/A|frameshift_variant;REV__VPS13A|p.K1113Rfs*30|1|0.13|ENSG00000197969|chr9:77283645-77283645|A/-|frameshift_variant;REV__VPS13A|p.M1697Cfs*13|1|0.07|ENSG00000197969|chr9:77318363-77318363|A/-|frameshift_variant;REV__VPS13A|p.N2071Tfs*18|2|0.32|ENSG00000197969|chr9:77337367-77337367|A/-|frameshift_variant;REV__VPS13A|p.Y2315Ifs*2|1|0.09|ENSG00000197969|chr9:77340463-77340463|T/-|frameshift_variant	23.52269567125451	0.3573684076213556	3				NaN	NaN	0	NaN	4464	3881	8343
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8354	26.53	NaN	13153	30	0	1443.7	0.214				-1	 	0	73	483.7667440454187	965.5189351576374	2	483.7662048339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4468	3884	8353
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8355	26.533	NaN	5106.4	30	0	507.45	0.106				-1	 	0	60	451.2534613746905	900.492369816181	2	451.2529602050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4469	3884	8353
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8356	26.535	NaN	9985.2	30	0	3507.5	0.106				-1	SALSQTLLCH	10	54	377.1931219604849	1128.5575364816548	3	377.1927795410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SALSQTLLC(Carbamidomethyl (C))H_	nc|ENSG00000156500|Q6P4D5|PABIR3	37.50817390946774	0.5721060100277453	3				NaN	NaN	0	NaN	4470	3884	8353
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8357	26.537	NaN	3619.6	30	0	617.57	0.106	+			14530	GTDRTGFTFK	10	63	565.2867884053146	1128.5590238774291	2	565.2855834960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTDRTGFTFK_	ENSG00000100297|ENST00000216122|MCM5	61.691277971877994	0.35045824941635534	3				NaN	NaN	0	NaN	4471	3884	8353
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8358	26.539	NaN	1633.9	30	0	249.31	0.106	+			3811	ATAGNVLMH	9	52	457.23154988058843	912.4485468279769	2	457.23114013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATAGNVLMH_	ENSG00000157637|ENST00000374759|SLC38A10;ENST00000546352.1_1_17:79244758-79256003:-|nuORF;nc|ENSG00000157637|Q9HBR0-2|SLC38A10;nc|ENSG00000157637|Q9HBR0-3|SLC38A10	63.30626980617807	0.18605348971131092	3				NaN	NaN	0	NaN	4472	3884	8353
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8359	26.54	NaN	2227.5	30	0	474.83	0.106			+	1996	AKGAEVLAEA	10	65	479.76516702229065	NaN	0	479.7635803222656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AKGAEVLAEA_	REV__ADPRH|p.A172Pfs*12|1|0.32|ENSG00000144843|chr3:119586496-119586496|G/-|frameshift_variant;REV__ENSG00000144843|ENST00000357003|ADPRH	54.776311868738084	0.27540594196716844	3				NaN	NaN	0	NaN	4473	3884	8353
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8360	26.542	NaN	1723.8	30	0	216.63	0.033	+			15470	GVAELGVTK	9	51	437.25575045684195	NaN	0	437.25567626953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GVAELGVTK_	ENSG00000105058|ENST00000263384|FAM32A;ENST00000589852.5_1_19:16296199-16296328:+|nuORF;nc|ENSG00000105058|Q9Y421-2|FAM32A	56.43379154798735	0.16452882468284893	3				NaN	NaN	0	NaN	4474	3884	8353
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8364	26.556	NaN	4641	30	0	1444.7	0.214	+			15137	GTSEFITGK	9	52	470.2430845850672	938.4716162369344	2	470.2426452636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTSEFITGK_	ENSG00000110002|ENST00000456829|VWA5A;VWA5A|p.D571Mfs*3|1|0.56|ENSG00000110002|chr11:124137094-124137094|A/-|frameshift_variant	87.69643885390035	0.07135982304947239	3				NaN	NaN	0	NaN	4475	3887	8363
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8365	26.56	NaN	2637.2	30	0	321.73	0.106	+			12873	GEQYDQAKL	9	63	526.2560872049079	1050.4976214766157	2	526.2573852539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEQYDQAKL_	CNOT1|p.Q904Sfs*9|4|0.29|ENSG00000125107|chr16:58555436-58555436|A/-|frameshift_variant;ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1;nc|ENSG00000125107|A5YKK6-4|CNOT1	72.2432373244024	0.13108886737667413	3				NaN	NaN	0	NaN	4476	3887	8363
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8366	26.562	NaN	2675.5	30	0	223.99	0.106	+			41345	SVLVSAGNVK	10	60	487.28775561981325	972.5609583064265	2	487.287353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVLVSAGNVK_	DYNC1H1|p.F2635Lfs*67|1|0.16|ENSG00000197102|chr14:102017141-102017141|T/-|frameshift_variant;DYNC1H1|p.K3112Hfs*3|1|0.31|ENSG00000197102|chr14:102027998-102027999|-/TCACAAG|frameshift_variant;DYNC1H1|p.W4201Gfs*43|1|0.42|ENSG00000197102|chr14:102043958-102043958|G/-|frameshift_variant;ENSG00000197102|ENST00000360184|DYNC1H1	51.52775601994872	0.4429225830406686	3				NaN	NaN	0	NaN	4477	3887	8363
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8367	26.563	NaN	3446.6	30	0	317.43	0.106	+			25717	LRQEAEQL	8	66	493.76705031615194	985.5195476991039	2	493.76708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LRQEAEQL_	ENSG00000078369|ENST00000378609|GNB1;ENSG00000111664|ENST00000229264|GNB3;ENSG00000114450|ENST00000232564|GNB4;ENSG00000172354|ENST00000303210|GNB2;ENST00000480159.1_1_7:100273867-100274642:+|nuORF;ENST00000607589.1_1_1:1756799-1756892:-|nuORF;nc|ENSG00000078369|P62873-2|GNB1;nc|ENSG00000111664|P16520-2|GNB3;REV__ENSG00000103051|ENST00000323786|COG4;REV__ENST00000530314.5_1_16:70543112-70557304:-|nuORF;REV__ENST00000562200.5_1_16:70543798-70557434:-|nuORF;REV__nc|ENSG00000103051|Q9H9E3-2|COG4;REV__nc|ENSG00000103051|Q9H9E3-3|COG4;REV__nc|ENSG00000103051|Q9H9E3|COG4	96.19043198914106	0.25873003980794995	3				NaN	NaN	0	NaN	4478	3887	8363
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8368	26.565	NaN	2682	30	0	379.44	0.106				-1	VLRVTPCIPC	10	65	579.3126143320578	1156.6106757309155	2	579.3126831054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_VLRVTPCIPC(Carbamidomethyl (C))_	ENSG00000151835|ENST00000382292|SACS;nc|ENSG00000151835|Q9NZJ4-2|SACS;SACS|p.I3485Lfs*10|1|0.24|ENSG00000151835|chr13:23333423-23333423|T/-|frameshift_variant;SACS|p.K2931Nfs*22|1|0.23|ENSG00000151835|chr13:23335083-23335083|T/-|frameshift_variant;SACS|p.L2871Ffs*29|1|0.26|ENSG00000151835|chr13:23335263-23335264|-/A|frameshift_variant;SACS|p.L3102*|1|0.33|ENSG00000151835|chr13:23334571-23334571|A/-|frameshift_variant;SACS|p.S4423Ffs*42|1|0.18|ENSG00000151835|chr13:23330610-23330611|-/G|frameshift_variant	31.529811441608018	0.6223461015008678	3				NaN	NaN	0	NaN	4479	3887	8363
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8369	26.567	NaN	2230	30	0	379.86	0.106	+			38175	SQCEFSMGK	9	60	537.2236689107056	1072.432784888211	2	537.2242431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_SQC(Carbamidomethyl (C))EFSMGK_	ENSG00000163634|ENST00000295899|THOC7;ENST00000487570.1_1_3:63824036-63825384:-|nuORF;THOC7|p.M198Ifs*5|1|0.05|ENSG00000163634|chr3:63834152-63834153|CC/-|frameshift_variant;THOC7|p.N115Kfs*6|1|0.12|ENSG00000163634|chr3:63837983-63837984|-/T|frameshift_variant;THOC7|p.Q105Afs*16|1|0.29|ENSG00000163634|chr3:63838016-63838017|-/T|frameshift_variant	48.601550744091256	0.3193666407755445	3				NaN	NaN	0	NaN	4480	3887	8363
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8370	26.569	NaN	2758.6	30	0	756.41	0.034				-1	AVLCDLLQ	8	56	466.25022169978047	930.485890466361	2	466.2496337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_AVLC(Carbamidomethyl (C))DLLQ_	ENSG00000115970|ENST00000405975|THADA;nc|ENSG00000115970|Q6YHU6-2|THADA;nc|ENSG00000115970|Q6YHU6-3|THADA;nc|ENSG00000115970|Q6YHU6-4|THADA	47.91560031466742	0.6071945918984287	3				NaN	NaN	0	NaN	4481	3887	8363
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8379	26.589	NaN	8027.3	30	0	4773.7	0.214	+			9483	EKRLNMALQ	9	64	551.8054949047728	1101.5964368763455	2	551.8060913085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EKRLNMALQ_	ENSG00000162843|ENST00000437684|WDR64;nc|ENSG00000162843|B1ANS9-2|WDR64;nc|ENSG00000162843|B1ANS9|WDR64;WDR64|p.L1065*|1|0.34|ENSG00000162843|chr1:241801161-241801161|T/-|frameshift_variant	33.921630207806714	0.48623198279849766	3				NaN	NaN	0	NaN	4487	3890	8378
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8380	26.592	NaN	4178.2	30	0	864.17	0.106	+			17418	IASSRSVDL	9	62	474.26099346433034	946.5074339954607	2	474.25933837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IASSRSVDL_	ENSG00000135052|ENST00000388712|GOLM1;GOLM1|p.K180Nfs*4|1|0.16|ENSG00000135052|chr9:86040796-86040797|-/A|frameshift_variant;GOLM1|p.N182Efs*2|1|0.23|ENSG00000135052|chr9:86040796-86040797|-/T|frameshift_variant;nc|ENSG00000135052|Q8NBJ4-2|GOLM1	76.7741389293348	0.11149722112137898	3				NaN	NaN	0	NaN	4488	3890	8378
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8381	26.594	NaN	2484.6	30	0	1055.2	0.106				-1	NVIAADMC	8	45	455.1942111241231	908.3738693150462	2	455.1937255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_NVIAADM(Oxidation (M))C(Carbamidomethyl (C))_	ENSG00000148411|ENST00000277554|NACC2	35.61828744233558	0.6843154725607303	3				NaN	NaN	0	NaN	4489	3890	8378
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8382	26.596	NaN	1688	30	0	202.91	0.106	+			30541	QAKNGRCQVL	10	65	558.798519449398	1115.5824859655959	2	558.798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QAKNGRCQVL_	ENSG00000134363|ENST00000256759|FST;FST|p.K255Nfs*43|1|0.06|ENSG00000134363|chr5:53485035-53485035|A/-|frameshift_variant;FST|p.Y214Lfs*23|1|0.04|ENSG00000134363|chr5:53484210-53484211|-/A|frameshift_variant;nc|ENSG00000134363|P19883-2|FST	44.116797842482775	0.5112108506279902	3				NaN	NaN	0	NaN	4490	3890	8378
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8383	26.598	NaN	651.29	30	0	84.958	0.106				-1	EVMSDLEESKY	11	36	673.295652184889	NaN	0	673.2964477539062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_EVM(Oxidation (M))SDLEESKY_	ENSG00000116337|ENST00000528667|AMPD2;ENST00000526301.5_1_1:110162158-110172443:+|nuORF;nc|ENSG00000116337|Q01433-2|AMPD2;nc|ENSG00000116337|Q01433-4|AMPD2;nc|ENSG00000116337|Q01433-5|AMPD2	23.52269567125451	0.456735970842152	3				NaN	NaN	0	NaN	4491	3890	8378
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8384	26.6	NaN	1711.9	30	0	462.69	0.033			+	-1	GLMTKGLL	8	38	424.75015330539986	NaN	0	424.7509460449219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_GLM(Oxidation (M))TKGLL_	REV__tr|U7SLS9|U7SLS9_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02160PE=4SV=1	20.481830146152948	1.741893751539848	3				NaN	NaN	0	NaN	4492	3890	8378
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8390	26.614	NaN	9354.3	30	0	4164.7	0.214	+			14198	GSSASLVLK	9	58	431.25576571109656	860.4969784889931	2	431.2552795410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSSASLVLK_	ENSG00000075415|ENST00000552981|SLC25A3;ENST00000546766.5_1_12:98989476-98995303:+|nuORF;ENST00000547869.1_1_12:98994914-98995303:+|nuORF;ENST00000551123.5_1_12:98989412-98995303:+|nuORF;nc|ENSG00000075415|Q00325|SLC25A3	104.0567914643314	0.03506238181059741	3				NaN	NaN	0	NaN	4495	3893	8389
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8391	26.618	NaN	7132.5	30	0	1032.2	0.106	+			6655	AYVHMVTHF	9	69	560.7659826331158	1119.5174123330314	2	560.7659301757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_AYVHM(Oxidation (M))VTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	97.47269410471826	0.04379738608259218	3				NaN	NaN	0	NaN	4496	3893	8389
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8392	26.62	NaN	2036	30	0	208.89	0.106			+	29837	PLAGDQHW	8	55	462.22252807910286	922.4305032250057	2	462.2219543457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PLAGDQHW_	REV__ENSG00000148396|ENST00000684901|SEC16A;REV__nc|ENSG00000148396|O15027-2|SEC16A;REV__nc|ENSG00000148396|O15027-3|SEC16A;REV__nc|ENSG00000148396|O15027-4|SEC16A;REV__nc|ENSG00000148396|O15027-5|SEC16A;REV__SEC16A|p.P2155Hfs*25|1|0.25|ENSG00000148396|chr9:136447664-136447664|G/-|frameshift_variant	57.81127852772723	0.5234495074909924	3				NaN	NaN	0	NaN	4497	3893	8389
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8393	26.621	NaN	2042.9	30	0	453.74	0.106	+			40102	STNWSDVGK	9	52	497.23574732144283	992.4569417096857	2	497.2347717285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STNWSDVGK_	ENSG00000165416|ENST00000310528|SUGT1;ENST00000609175.1_1_13:53261778-53261967:+|nuORF;nc|ENSG00000165416|Q9Y2Z0|SUGT1	58.2462437865262	0.22823408064396822	3				NaN	NaN	0	NaN	4498	3893	8389
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8394	26.623	NaN	2232.2	30	0	597.84	0.106				-1	RYLEKPMEI	9	43	597.8134487241152	1193.6123445150304	2	598.3146362304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_RYLEKPM(Oxidation (M))EI_	ENSG00000168610|ENST00000264657|STAT3;nc|ENSG00000168610|P40763-2|STAT3;nc|ENSG00000168610|P40763-3|STAT3;STAT3|p.R729Afs*3|2|0.33|ENSG00000168610|chr17:42316861-42316861|G/-|frameshift_variant	29.170058357718403	0.5306379469863586	3				NaN	NaN	0	NaN	4499	3893	8389
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8395	26.625	NaN	2337	30	0	255.53	0.038	+			33592	RLMSLPIAKK	10	44	386.2461416903275	1155.7165956711824	3	386.245849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RLMSLPIAKK_	ENSG00000198663|ENST00000480824|C6orf89;nc|nan|Q6UWU4-2|C6orf89	38.714083909724	0.5609941533943991	3				NaN	NaN	0	NaN	4500	3893	8389
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8402	26.641	NaN	11456	30	0	2155.9	0.214			+	-1	LSTIVYSMSI	10	76	565.2958626250932	1128.5771723169862	2	565.295654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LSTIVYSM(Oxidation (M))SI_	REV__ENSG00000125522|ENST00000684052|NPBWR2	62.107414245175825	0.3466735403679669	3				NaN	NaN	0	NaN	4504	3896	8401
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8403	26.645	NaN	15974	30	0	5442.2	0.106	+			35447	SASKELQQAPA	11	65	377.1999439117568	1128.5780023354705	3	377.1993408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SASKELQQAPA_	ENST00000538790.1_1_12:122505978-122506339:+|nuORF	32.81241826257853	0.645615689454792	3				NaN	NaN	0	NaN	4505	3896	8401
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8404	26.647	NaN	4845.2	30	0	478.19	0.106	+			33998	RSGYQLTLH	9	77	537.7884794420556	1073.5624059509112	2	537.788330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RSGYQLTLH_	ENSG00000189144|ENST00000536220|ZNF573;nc|ENSG00000189144|Q86YE8-2|ZNF573;nc|ENSG00000189144|Q86YE8-3|ZNF573;nc|ENSG00000189144|Q86YE8-4|ZNF573	69.6276240434122	0.14239879520340665	3				NaN	NaN	0	NaN	4506	3896	8401
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8405	26.649	NaN	2842.9	30	0	239.68	0.106			+	47385	VPIRYYPFP	9	63	576.3156875131662	1150.6168220931322	2	576.3160400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VPIRYYPFP_	REV__ENST00000377113.5_1_10:21785785-21785953:-|nuORF	42.47446043378293	0.39123495718708534	3				NaN	NaN	0	NaN	4507	3896	8401
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8406	26.65	NaN	1583.5	30	0	156.67	0.106	+			36033	SEIQEEKPEPV	11	55	642.8197347911138	NaN	0	642.819091796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SEIQEEKPEPV_	ENSG00000145907|ENST00000356245|G3BP1	97.59673978297657	0.03765638827910137	3				NaN	NaN	0	NaN	4508	3896	8401
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8407	26.652	NaN	2250.6	30	0	206.83	0.106			+	25608	LQLNEKEL	8	61	493.77950114414324	NaN	0	493.7791442871094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LQLNEKEL_	REV__CCDC88A|p.E735Sfs*10|1|0.33|ENSG00000115355|chr2:55334619-55334619|T/-|frameshift_variant;REV__CCDC88A|p.I779Sfs*4|1|0.29|ENSG00000115355|chr2:55334486-55334486|T/-|frameshift_variant;REV__CCDC88A|p.L1472Ffs*8|1|0.35|ENSG00000115355|chr2:55303124-55303125|-/A|frameshift_variant;REV__CCDC88A|p.N1003Kfs*3|1|0.32|ENSG00000115355|chr2:55322681-55322682|-/T|frameshift_variant;REV__CCDC88A|p.T678Hfs*8|1|0.16|ENSG00000115355|chr2:55334789-55334789|T/-|frameshift_variant;REV__CCDC88C|p.K1383Sfs*29|1|0.08|ENSG00000015133|chr14:91291049-91291049|T/-|frameshift_variant;REV__ENSG00000015133|ENST00000389857|CCDC88C;REV__ENSG00000115355|ENST00000436346|CCDC88A;REV__nc|ENSG00000115355|Q3V6T2-2|CCDC88A;REV__nc|ENSG00000115355|Q3V6T2-3|CCDC88A;REV__nc|ENSG00000115355|Q3V6T2-4|CCDC88A;REV__nc|ENSG00000115355|Q3V6T2-5|CCDC88A	93.19546047674547	1.7418937515398478	3				NaN	NaN	0	NaN	4509	3896	8401
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8408	26.654	NaN	917.62	30	0	255.8	0.033			+	47285	VNAQSLVL	8	37	422.25026394677735	NaN	0	422.24969482421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VNAQSLVL_	REV__ENST00000419462.1_1_8:102381493-102381775:+|nuORF;REV__nc|ENSG00000228224|Q9BZK3|NACA4P	24.20275056022122	1.7418937515398478	3				NaN	NaN	0	NaN	4510	3896	8401
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8417	26.674	NaN	18520	30	0	3346.4	0.214				-1	 	0	61	322.19386621469073	642.3731794961815	2	322.19366455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4516	3899	8416
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8418	26.678	NaN	1733.4	30	0	792.62	0.106	+			35351	SAPHGPGLI	9	40	424.7348145728627	NaN	0	424.7346496582031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAPHGPGLI_	AHSG|p.A241Gfs*26|1|0.16|ENSG00000145192|chr3:186619898-186619899|-/G|frameshift_variant;ENSG00000145192|ENST00000411641|AHSG	33.51558372728122	0.30835390848773375	3				NaN	NaN	0	NaN	4517	3899	8416
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8419	26.68	NaN	1480.7	30	0	103.78	0.106	+			10483	EVRGNGSL	8	52	416.2195842619664	NaN	0	416.2198791503906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EVRGNGSL_	ENSG00000243232|ENST00000289269|PCDHAC2;nc|ENSG00000243232|Q9Y5I4-2|PCDHAC2	56.72105179125745	1.7418937515398478	3				NaN	NaN	0	NaN	4518	3899	8416
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8420	26.681	NaN	1211.8	30	0	124.53	0.035	+			40209	STSDILSEK	9	49	490.2513191475441	978.4880853618882	2	490.2512512207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STSDILSEK_	ENSG00000133858|ENST00000378743|ZFC3H1;nc|ENSG00000133858|O60293-2|ZFC3H1;ZFC3H1|p.E1034Dfs*26|1|0.04|ENSG00000133858|chr12:71632230-71632231|-/AATAAAAATACTG|frameshift_variant;ZFC3H1|p.E390Nfs*4|1|0.39|ENSG00000133858|chr12:71644989-71644989|T/-|frameshift_variant;ZFC3H1|p.K385Nfs*9|5|0.36|ENSG00000133858|chr12:71645001-71645001|T/-|frameshift_variant;ZFC3H1|p.L1048*|1|0.18|ENSG00000133858|chr12:71632189-71632189|A/-|frameshift_variant;ZFC3H1|p.L1693Ffs*10|1|0.1|ENSG00000133858|chr12:71619380-71619381|-/A|frameshift_variant;ZFC3H1|p.V423Sfs*2|1|0.32|ENSG00000133858|chr12:71644889-71644890|-/T|frameshift_variant	27.047317107675042	0.5504760921104335	3				NaN	NaN	0	NaN	4519	3899	8416
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8425	26.696	NaN	6559.2	30	0	1235.9	0.214	+			29089	NTMNQFVNK	9	77	548.2663720572695	1094.5181911813388	2	548.266845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NTMNQFVNK_	ENSG00000168090|ENST00000303904|COPS6	145.15565482312357	0.00806134135205793	3				NaN	NaN	0	NaN	4521	3902	8424
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8426	26.699	NaN	2415.9	30	0	218.43	0.106			+	21671	KQAPAAEGSGL	11	60	514.7724736828787	1027.5303944325574	2	514.7731323242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KQAPAAEGSGL_	REV__ENSG00000139890|ENST00000267396|REM2;REV__nc|ENSG00000139890|Q8IYK8-2|REM2	29.170058357718403	0.683821074385409	3				NaN	NaN	0	NaN	4522	3902	8424
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8427	26.701	NaN	915.58	30	0	112.74	0.106			+	13694	GPPPTLPQD	9	53	461.2365417480469	NaN	0	461.2365417480469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GPPPTLPQD_	REV__ENST00000264956.10_2_4:5813500-5814718:+|nuORF	26.69291269510374	0.34280015626154364	3				NaN	NaN	0	NaN	4523	3902	8424
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8428	26.703	NaN	1573	30	0	241.34	0.035			+	-1	FAMLCREY	8	55	524.7330277050144	NaN	0	524.7324829101562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_FAM(Oxidation (M))LCREY_	REV__ENSG00000171931|ENST00000395665|FBXW10;REV__ENSG00000241322|ENST00000395906|FBXW10B;REV__ENST00000574478.1_1_17:18651366-18682393:+|nuORF;REV__nc|ENSG00000171931|Q5XX13-2|FBXW10;REV__nc|ENSG00000171931|Q5XX13-3|FBXW10;REV__nc|ENSG00000171931|Q5XX13-4|FBXW10;REV__nc|ENSG00000241322|O95170-2|FBXW10B	31.954861631926434	1.7418937515398478	3				NaN	NaN	0	NaN	4524	3902	8424
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8434	26.719	NaN	4067	30	0	1564.7	0.214			+	44496	TSSILYNLQ	9	64	519.777042935866	1037.539532938532	2	519.7767944335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSSILYNLQ_	REV__STARD6|p.I54Mfs*62|1|0.11|ENSG00000174448|chr18:54337230-54337231|-/AC|frameshift_variant	44.116797842482775	0.37197099687881774	3				NaN	NaN	0	NaN	4527	3905	8433
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8435	26.722	NaN	2671.7	30	0	174.05	0.106	+			671	AEAITSQKL	9	57	480.77200774588067	959.5294625585614	2	480.7710876464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEAITSQKL_	ENSG00000203697|ENST00000366872|CAPN8	47.95952297671804	0.32689736945648856	3				NaN	NaN	0	NaN	4528	3905	8433
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8436	26.724	NaN	2520.7	30	0	196.04	0.106			+	24482	LGGSSLTSLP	10	62	466.25717110578006	NaN	0	466.25689697265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LGGSSLTSLP_	REV__TMEM129|p.P123Hfs*42|1|0.1|ENSG00000168936|chr4:1718464-1718464|G/-|frameshift_variant	56.72105179125745	0.2610545891966633	3				NaN	NaN	0	NaN	4529	3905	8433
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8437	26.726	NaN	2324.9	30	0	344.91	0.106			+	1895	AIMESLEPTCY	11	49	419.5218216094291	NaN	0	419.1871032714844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AIMESLEPTCY_	REV__ENSG00000176887|ENST00000322002|SOX11	26.063383197487333	0.44926255568796863	3				NaN	NaN	0	NaN	4530	3905	8433
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8438	26.728	NaN	1352.7	30	0	244.4	0.04			+	2782	ARQNTLKYKW	10	47	436.5784074964532	NaN	0	436.5784606933594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ARQNTLKYKW_	REV__ENSG00000085998|ENST00000371984|POMGNT1;REV__ENST00000489985.1_1_1:46661446-46663526:-|nuORF;REV__nc|ENSG00000085998|Q8WZA1-2|POMGNT1;REV__POMGNT1|p.V328Cfs*5|1|0.35|ENSG00000085998|chr1:46193608-46193608|C/-|frameshift_variant	40.05817265558897	0.3684561582319974	3				NaN	NaN	0	NaN	4531	3905	8433
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8448	26.75	NaN	2194.9	30	0	193.8	0.215			+	-1	SSQLAELH	8	60	463.73209206963566	NaN	0	463.7326965332031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SSQLAELH_	REV__AMPH|p.A148S|1|0.25|ENSG00000078053|chr7:38476924-38476924|C/A|missense_variant;REV__AMPH|p.A487Pfs*19|2|0.31|ENSG00000078053|chr7:38394154-38394154|C/-|frameshift_variant;REV__ENSG00000078053|ENST00000356264|AMPH;REV__nc|ENSG00000078053|P49418-2|AMPH	47.91560031466742	1.7418937515398478	3				NaN	NaN	0	NaN	4538	3908	8447
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8449	26.753	NaN	1484.4	30	0	167.16	0.106				-1	VMPDECPQ	8	56	496.19695812023224	990.3793633072645	2	496.1964416503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_VM(Oxidation (M))PDEC(Carbamidomethyl (C))PQ_	ENSG00000164050|ENST00000296440|PLXNB1;nc|ENSG00000164050|O43157-2|PLXNB1;nc|ENSG00000164050|O43157-3|PLXNB1;PLXNB1|p.G179Vfs*41|4|0.22|ENSG00000164050|chr3:48424076-48424076|C/-|frameshift_variant;PLXNB1|p.L900Sfs*25|1|0.11|ENSG00000164050|chr3:48419592-48419592|G/-|frameshift_variant	35.200714571348534	0.6875396545722289	3				NaN	NaN	0	NaN	4539	3908	8447
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8450	26.755	NaN	1788.5	30	0	207.85	0.106			+	12442	GEAVARKI	8	48	422.256327078368	842.498101223536	2	422.25616455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEAVARKI_	REV__ENSG00000113391|ENST00000395965|FAM172A;REV__ENST00000506398.6_1_5:93217085-93410459:-|nuORF;REV__FAM172A|p.V310Afs*9|1|0.04|ENSG00000113391|chr5:93784477-93784478|-/GTGCTGAGATGAATGGGTGTGAG|frameshift_variant;REV__nc|ENSG00000113391|Q8WUF8-2|ARB2A;REV__nc|ENSG00000113391|Q8WUF8-3|ARB2A	40.5726180659479	0.6527593143185008	3				NaN	NaN	0	NaN	4540	3908	8447
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8451	26.757	NaN	1642.7	30	0	199.57	0.106				-1	KCVPPEMRE	9	61	573.2775586345183	1144.5405643358365	2	573.277587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_KC(Carbamidomethyl (C))VPPEMRE_	ENSG00000258484|ENST00000310673|SPESP1	39.252832667884924	0.4290233611298554	3				NaN	NaN	0	NaN	4541	3908	8447
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8452	26.759	NaN	3041.4	30	0	674.52	0.106	+			14970	GTMTGMLYK	9	59	509.2407272570669	1016.4669015809338	2	509.2392883300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_GTMTGM(Oxidation (M))LYK_	ENSG00000178440|ENST00000651763|TIMM23B-AGAP6;ENSG00000204152|ENST00000651259|TIMM23B;ENSG00000265354|ENST00000580018|TIMM23;nc|ENSG00000204152|Q5SRD1-2|TIMM23B	47.657333605630114	0.33044192980041115	3				NaN	NaN	0	NaN	4542	3908	8447
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8453	26.761	NaN	2268.7	30	0	141.74	0.035	+			4971	ATQVAVSVPK	10	60	500.29547692192875	998.5764009106575	2	500.2950439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATQVAVSVPK_	EIF4G1|p.P1229Qfs*2|1|0.18|ENSG00000114867|chr3:184327606-184327606|C/-|frameshift_variant;ENSG00000114867|ENST00000346169|EIF4G1;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1	50.033510581677724	0.4566913063131936	3				NaN	NaN	0	NaN	4543	3908	8447
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8454	26.761	NaN	1901.8	30	0	259.82	0.141	+			7009	CRSFRRHL	8	60	537.7884794420556	1073.5624059509112	2	537.7864990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_CRSFRRHL_	ENSG00000100078|ENST00000215885|PLA2G3	55.50420428727701	0.5462892107279674	3				NaN	NaN	0	NaN	4544	3908	8447
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8460	26.777	NaN	2705.3	30	0	520.93	0.214	+			23097	KVVEGSFVYK	10	68	578.3243882915306	1154.634223649861	2	578.32421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVVEGSFVYK_	ENSG00000203879|ENST00000447750|GDI1;ENST00000491154.1_1_X:153666748-153668487:+|nuORF	59.26467630326872	0.3725278979457616	3				NaN	NaN	0	NaN	4547	3911	8459
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8461	26.781	NaN	1876.9	30	0	176.81	0.106	+			46179	VDVSGPKM	8	55	416.7157532601499	NaN	0	416.7152099609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VDVSGPKM_	AHNAK|p.K2311Rfs*11|1|0.33|ENSG00000124942|chr11:62527487-62527487|G/-|frameshift_variant;AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;AHNAK|p.L2124Ifs*37|1|0.04|ENSG00000124942|chr11:62528048-62528049|-/ATGCCTGATA|frameshift_variant;AHNAK|p.S1888Qfs*8|1|0.11|ENSG00000124942|chr11:62528755-62528756|-/G|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK	45.97224482568171	1.7418937515398478	3				NaN	NaN	0	NaN	4548	3911	8459
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8462	26.783	NaN	3420.4	30	0	482.78	0.106	+			7184	DAGVYSARY	9	59	501.23811291460737	1000.4616728960148	2	501.2378845214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DAGVYSARY_	ENSG00000120156|ENST00000380036|TEK;nc|ENSG00000120156|Q02763-2|TEK;nc|ENSG00000120156|Q02763-3|TEK;TEK|p.E624Nfs*33|1|0.41|ENSG00000120156|chr9:27197556-27197556|G/-|frameshift_variant;TEK|p.N809Tfs*21|1|0.22|ENSG00000120156|chr9:27206639-27206639|A/-|frameshift_variant;TEK|p.N884Kfs*6|1|0.16|ENSG00000120156|chr9:27209197-27209197|C/-|frameshift_variant;TEK|p.P417Lfs*10|1|0.71|ENSG00000120156|chr9:27185547-27185547|C/-|frameshift_variant;TEK|p.S586Vfs*12|1|0.27|ENSG00000120156|chr9:27197441-27197441|A/-|frameshift_variant	40.77816245573522	0.41113185337114944	3				NaN	NaN	0	NaN	4549	3911	8459
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8463	26.785	NaN	2202.6	30	0	491.34	0.106			+	26048	LSLLRFGTT	9	32	336.5344827364626	1006.5816188095879	3	336.86846923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSLLRFGTT_	REV__ENST00000315127.8_2_15:74923516-74923606:-|nuORF	19.359975847455235	0.6112419832031293	3				NaN	NaN	0	NaN	4550	3911	8459
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8464	26.786	NaN	1566.3	30	0	562.1	0.106			+	32562	QVVQKQPQ	8	47	477.77222279011613	953.5298926470323	2	477.7715759277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QVVQKQPQ_	REV__ENSG00000137073|ENST00000379238|UBAP2;REV__ENST00000459988.1_1_9:34011638-34017161:-|nuORF;REV__ENST00000480885.5_1_9:33998751-34017161:-|nuORF;REV__UBAP2|p.K381Efs*18|1|0.03|ENSG00000137073|chr9:33948506-33948507|-/G|frameshift_variant;REV__UBAP2|p.L380Sfs*2|1|0.03|ENSG00000137073|chr9:33948507-33948508|-/TT|frameshift_variant	33.51558372728122	0.7005509609380386	3				NaN	NaN	0	NaN	4551	3911	8459
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8465	26.788	NaN	1611.3	30	0	337.83	0.106	+			24885	LKKEVESQL	9	42	358.54488896496014	1072.6128374950804	3	358.54412841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LKKEVESQL_	ENSG00000080503|ENST00000349721|SMARCA2;nc|ENSG00000080503|P51531-2|SMARCA2	45.97224482568171	0.3502073465782774	3				NaN	NaN	0	NaN	4552	3911	8459
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8466	26.79	NaN	1039.9	30	0	366.16	0.039			+	13301	GKDISMQRCPF	11	31	641.3072534382039	1280.5999539432078	2	641.3069458007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GKDISMQRCPF_	REV__ENSG00000156510|ENST00000354624|HKDC1;REV__nc|ENSG00000156510|Q2TB90-2|HKDC1;REV__nc|ENSG00000156510|Q2TB90-3|HKDC1	12.206681093483082	0.8133326165653908	3				NaN	NaN	0	NaN	4553	3911	8459
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8471	26.804	NaN	2663.1	30	0	244.24	0.214	+			44444	TSMSKMFVK	9	60	529.7721228730437	1057.5296928128873	2	529.7720947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSMSKMFVK_	ATP2A2|p.I1027Cfs*4|1|0.37|ENSG00000174437|chr12:110346394-110346395|-/TGTGCTGCTCATAATGCCCCTGG|frameshift_variant;ENSG00000174437|ENST00000539276|ATP2A2;nc|ENSG00000174437|P16615-2|ATP2A2;nc|ENSG00000174437|P16615-3|ATP2A2;nc|ENSG00000174437|P16615-4|ATP2A2;nc|ENSG00000174437|P16615-5|ATP2A2	36.446750945000026	0.4619375763483977	3				NaN	NaN	0	NaN	4555	3914	8470
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8472	26.808	NaN	1307.5	30	0	151.2	0.106			+	49427	VVVDKTGP	8	45	407.7375282952075	813.460503657215	2	407.737060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVVDKTGP_	REV__ENSG00000064651|ENST00000262461|SLC12A2;REV__nc|ENSG00000064651|P55011-3|SLC12A2;REV__SLC12A2|p.E1119Rfs*7|1|0.47|ENSG00000064651|chr5:128184417-128184418|-/A|frameshift_variant;REV__SLC12A2|p.P1171Sfs*18|1|0.38|ENSG00000064651|chr5:128186498-128186499|-/TC|frameshift_variant	45.9519527083369	0.6193794311207887	3				NaN	NaN	0	NaN	4556	3914	8470
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8473	26.81	NaN	1818.7	30	0	179.9	0.106	+			27704	MPYSHPSSY	9	59	534.7271873305109	1067.4398217278217	2	534.7276000976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MPYSHPSSY_	ENSG00000164190|ENST00000282516|NIPBL;ENST00000504430.5_1_5:36961623-36995905:+|nuORF;nc|ENSG00000164190|Q6KC79-2|NIPBL;nc|ENSG00000164190|Q6KC79-3|NIPBL;NIPBL|p.F1423Lfs*15|1|0.43|ENSG00000164190|chr5:37008032-37008032|T/-|frameshift_variant;NIPBL|p.I2776Lfs*3|1|0.17|ENSG00000164190|chr5:37064797-37064797|A/-|frameshift_variant;NIPBL|p.K603Sfs*11|2|0.29|ENSG00000164190|chr5:36984981-36984981|A/-|frameshift_variant;NIPBL|p.L2220Ffs*3|1|0.21|ENSG00000164190|chr5:37048567-37048568|-/T|frameshift_variant;NIPBL|p.R505Efs*35|1|0.19|ENSG00000164190|chr5:36984687-36984687|A/-|frameshift_variant	68.78682469695295	0.14603441672067394	3				NaN	NaN	0	NaN	4557	3914	8470
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8474	26.812	NaN	1888.8	30	0	154.96	0.106	+			41312	SVLNSSNIL	9	54	473.7632489588833	NaN	0	473.76373291015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVLNSSNIL_	ENSG00000182993|ENST00000330828|C12orf60	42.86426827375447	0.2558691296974908	3				NaN	NaN	0	NaN	4558	3914	8470
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8475	26.813	NaN	3175.7	30	0	738.29	0.034			+	29072	NTKEVPKL	8	61	464.7768389360021	927.5391249388042	2	464.77679443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NTKEVPKL_	REV__ENSG00000112249|ENST00000369162|ASCC3;REV__ENST00000468245.2_1_6:101296020-101315873:-|nuORF;REV__nc|ENSG00000112249|Q8N3C0-4|ASCC3	47.657333605630114	0.6087971902037268	3				NaN	NaN	0	NaN	4559	3914	8470
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8483	26.831	NaN	3907.8	30	0	370.83	0.214	+			49288	VVQGDPREL	9	67	506.7750989856452	1011.5356450380904	2	506.77496337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVQGDPREL_	ENSG00000137642|ENST00000260197|SORL1;ENST00000532451.1_1_11:121323091-121416136:+|nuORF;SORL1|p.F2103Lfs*44|1|0.22|ENSG00000137642|chr11:121625218-121625218|T/-|frameshift_variant;SORL1|p.M1581Cfs*34|2|0.28|ENSG00000137642|chr11:121605196-121605196|A/-|frameshift_variant	60.11826168202944	0.21262886028301267	3				NaN	NaN	0	NaN	4564	3917	8482
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8484	26.835	NaN	1296.6	30	0	364.08	0.033			+	24399	LGAAVAQLP	9	42	420.2533015335607	838.4920501339215	2	420.2526550292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LGAAVAQLP_	REV__ENST00000489822.5_1_10:121347751-121356470:-|nuORF	33.51558372728122	0.4900267029546261	3				NaN	NaN	0	NaN	4565	3917	8482
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8488	26.849	NaN	2661.6	30	0	502.65	0.214				-1	EALRADMLE	9	62	532.2571412851628	1062.4997296371255	2	532.2568969726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_EALRADM(Oxidation (M))LE_	sp|P16782|RIR1_HCMVARibonucleoside-diphosphatereductaselargesubunit-likeproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=RIR1PE=3SV=1;sp|Q6SW87|RIR1_HCMVMRibonucleoside-diphosphatereductaselargesubunit-likeproteinOS=Humancytomegalovirus(strainMerlin)OX=295027GN=RIR1PE=3SV=1	47.657333605630114	0.33044192980041115	3				NaN	NaN	0	NaN	4566	3920	8487
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8489	26.852	NaN	2686.3	30	0	456.45	0.106	+			18354	IQNDRQLQY	9	67	589.3017803397353	1176.5890077462705	2	589.3021850585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IQNDRQLQY_	ENSG00000100109|ENST00000407690|TFIP11;TFIP11|p.N538Tfs*75|1|0.26|ENSG00000100109|chr22:26496309-26496309|T/-|frameshift_variant	60.11826168202944	0.21262886028301267	3				NaN	NaN	0	NaN	4567	3920	8487
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8490	26.854	NaN	6637	30	0	2864.4	0.106	+			8771	EEIAKVEKL	9	61	529.8088583127974	1057.6031636923947	2	529.8092651367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EEIAKVEKL_	ENSG00000170348|ENST00000303575|TMED10;ENST00000555036.1_1_14:75602424-75614456:-|nuORF;ENST00000556969.5_1_14:75601590-75614465:-|nuORF	104.01359247289065	0.03510646158778409	3				NaN	NaN	0	NaN	4568	3920	8487
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8491	26.856	NaN	5262.6	30	0	410.74	0.106	+			36576	SFSTVHEKF	9	71	541.2693527288529	1080.5241525245058	2	541.2683715820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SFSTVHEKF_	ENSG00000134987|ENST00000513710|WDR36;ENST00000505303.5_1_5:110428043-110447004:+|nuORF;nc|ENSG00000134987|Q8NI36|WDR36	84.81729255234993	0.07947707105691067	3				NaN	NaN	0	NaN	4569	3920	8487
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8492	26.858	NaN	4482.7	30	0	1132.4	0.106				-1	FLFLRMWC	8	55	377.8541878942674	1130.5407342830022	3	377.853759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_FLFLRM(Oxidation (M))WC_	HTR2B|p.L335R|1|0.36|ENSG00000135914|chr2:231108959-231108959|A/C|missense_variant	33.51558372728122	0.7005509609380386	3				NaN	NaN	0	NaN	4570	3920	8487
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8493	26.86	NaN	2631.3	30	0	699.53	0.106				-1	VVSLLRSTKM	10	50	383.89520263671875	NaN	0	383.89520263671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_VVSLLRSTKM(Oxidation (M))_	ENSG00000148498|ENST00000374788|PARD3;nc|ENSG00000148498|Q8TEW0-10|PARD3;nc|ENSG00000148498|Q8TEW0-11|PARD3;nc|ENSG00000148498|Q8TEW0-3|PARD3;nc|ENSG00000148498|Q8TEW0-4|PARD3;nc|ENSG00000148498|Q8TEW0-5|PARD3;nc|ENSG00000148498|Q8TEW0-6|PARD3;nc|ENSG00000148498|Q8TEW0-7|PARD3;nc|ENSG00000148498|Q8TEW0-8|PARD3;nc|ENSG00000148498|Q8TEW0-9|PARD3;nc|ENSG00000148498|Q8TEW0|PARD3;PARD3|p.S1335Lfs*15|1|0.17|ENSG00000148498|chr10:34111237-34111238|-/G|frameshift_variant	24.519189625965996	0.41966695327750003	3				NaN	NaN	0	NaN	4571	3920	8487
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8494	26.862	NaN	1129.8	30	0	153.19	0.035			+	39211	STADYPLPL	9	56	488.7507731445587	NaN	0	488.7508850097656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STADYPLPL_	REV__ENSG00000148219|ENST00000313400|ASTN2;REV__nc|ENSG00000148219|O75129-2|ASTN2;REV__nc|ENSG00000148219|O75129-3|ASTN2	45.9519527083369	0.2345902329052062	3				NaN	NaN	0	NaN	4572	3920	8487
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8504	26.883	NaN	4911.2	30	0	623.89	0.215	+			41910	SVVGNFQEK	9	74	504.26123282694243	1006.5079127206849	2	504.2611083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVVGNFQEK_	ENSG00000180061|ENST00000326652|TMEM150B	55.08391021199286	0.2545954270840753	3				NaN	NaN	0	NaN	4579	3923	8503
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8505	26.887	NaN	2864.6	30	0	349.76	0.106	+			23444	LADPENRQL	9	64	528.2782303905781	1054.541907847956	2	528.2781372070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LADPENRQL_	ENSG00000172164|ENST00000517992|SNTB1;ENST00000519177.5_1_8:121583594-121823792:-|nuORF;nc|ENSG00000172164|Q13884-2|SNTB1	45.97224482568171	0.3502073465782774	3				NaN	NaN	0	NaN	4580	3923	8503
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8506	26.889	NaN	7525.2	30	0	3431	0.106			+	40021	STMSVANKETS	11	49	385.5163036586531	1153.5270815761594	3	385.5159912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STMSVANKETS_	REV__ENSG00000185499|ENST00000620103|MUC1;REV__nc|ENSG00000185499|P15941-2|MUC1;REV__nc|ENSG00000185499|P15941-3|MUC1;REV__nc|ENSG00000185499|P15941-4|MUC1;REV__nc|ENSG00000185499|P15941-5|MUC1;REV__nc|ENSG00000185499|P15941|MUC1	25.125986553469783	0.7262400895305658	3				NaN	NaN	0	NaN	4581	3923	8503
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8507	26.891	NaN	1386.8	30	0	183.37	0.106	+			20220	KELITEKM	8	59	496.2784446616816	990.5423363901632	2	496.277587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KELITEKM_	ENSG00000177150|ENST00000651643|FAM210A	54.776311868738084	0.5534952410049249	3				NaN	NaN	0	NaN	4582	3923	8503
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8508	26.892	NaN	952.14	30	0	345.72	0.106	+			37882	SNVVVLPGNS	10	33	329.1830501252608	NaN	0	329.1829528808594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SNVVVLPGNS_	ENSG00000149308|ENST00000278612|NPAT;ENST00000610253.5_1_11:108042863-108061204:-|nuORF;NPAT|p.H1279Qfs*13|1|0.22|ENSG00000149308|chr11:108161248-108161249|TA/-|frameshift_variant;NPAT|p.K1038Efs*20|1|0.37|ENSG00000149308|chr11:108161974-108161975|-/C|frameshift_variant;NPAT|p.S1040Ifs*18|2|0.28|ENSG00000149308|chr11:108161968-108161969|-/T|frameshift_variant	17.833141474888023	0.4201028297492154	3				NaN	NaN	0	NaN	4583	3923	8503
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8509	26.894	NaN	1413.4	30	0	119.61	0.106			+	-1	AVVQMNGI	8	49	424.21876822381773	NaN	0	424.2188720703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_AVVQM(Oxidation (M))NGI_	REV__ENSG00000107897|ENST00000396271|ACBD5;REV__nc|ENSG00000107897|Q5T8D3-2|ACBD5;REV__nc|ENSG00000107897|Q5T8D3-4|ACBD5;REV__nc|ENSG00000107897|Q5T8D3|ACBD5	37.028477286268924	1.7418937515398478	3				NaN	NaN	0	NaN	4584	3923	8503
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8510	26.896	NaN	2133	30	0	148.71	0.037	+			51223	YPVEHPDKF	9	63	566.2788961643142	1130.5432393954284	2	566.2783813476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YPVEHPDKF_	ENSG00000165280|ENST00000358901|VCP;ENST00000493886.5_1_9:35057116-35062147:-|nuORF	58.2462437865262	0.22823408064396822	3				NaN	NaN	0	NaN	4585	3923	8503
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8518	26.916	NaN	8481.6	30	0	1111.3	0.214	+			3439	ASQLVGIEK	9	62	472.77462705679795	943.5347011803959	2	472.7738342285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASQLVGIEK_	ENSG00000077152|ENST00000646651|UBE2T	105.16503226865211	0.03393154504579365	3				NaN	NaN	0	NaN	4590	3926	8517
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8519	26.919	NaN	5742.4	30	0	1306.3	0.106	+			14311	GSYNKVFLAK	10	75	563.8166453724258	1125.6187378116515	2	563.8170776367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSYNKVFLAK_	ENSG00000099341|ENST00000215071|PSMD8;ENST00000592001.5_1_19:38865430-38871817:+|nuORF	139.38205640894643	0.010918844784185366	3				NaN	NaN	0	NaN	4591	3926	8517
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8520	26.921	NaN	1644.2	30	0	312.26	0.106	+			33577	RLKSESPKNQ	10	60	593.8310842179632	1185.6476155027262	2	593.8303833007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RLKSESPKNQ_	GTPBP8|p.F131Hfs*20|1|0.49|ENSG00000163607|chr3:112993080-112993083|TTTT/-|frameshift_variant	41.42661286455405	0.5359995577334734	3				NaN	NaN	0	NaN	4592	3926	8517
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8521	26.923	NaN	3221.9	30	0	773.67	0.106			+	17945	IGNTSKNIIQ	10	49	363.2083547263856	NaN	0	363.20819091796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IGNTSKNIIQ_	REV__ENST00000322602.9_1_5:153418645-153418858:+|nuORF	24.519189625965996	0.41966695327750003	3				NaN	NaN	0	NaN	4593	3926	8517
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8522	26.925	NaN	2948.2	30	0	888.1	0.106	+			14152	GSMTVVTVK	9	54	461.2572876215798	920.5000223099596	2	461.2566223144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GSMTVVTVK_	ENSG00000001461|ENST00000374399|NIPAL3;nc|ENSG00000001461|Q6P499-2|NIPAL3	70.8162118820467	0.13725933411854815	3				NaN	NaN	0	NaN	4594	3926	8517
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8523	26.927	NaN	1340.4	30	0	130.89	0.038			+	27033	LYVHHFYKV	9	61	603.3248327266282	1204.6351125200563	2	603.3252563476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LYVHHFYKV_	REV__CFAP47|p.S508Y|2|0.07|ENSG00000165164|chrX:35966677-35966677|C/A|missense_variant	51.33545320467046	0.2872990594074956	3				NaN	NaN	0	NaN	4595	3926	8517
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8524	26.927	NaN	2314.6	30	0	259.45	0.141				-1	KFCRMAASL	9	72	550.2744406467567	1098.5343283603133	2	550.2760009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C),Oxidation (M)	_KFC(Carbamidomethyl (C))RM(Oxidation (M))AASL_	ENST00000433544.1_1_1:94218982-94219231:-|nuORF	40.77816245573522	0.41113185337114944	3				NaN	NaN	0	NaN	4596	3926	8517
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8532	26.947	NaN	10602	30	0	2377.4	0.214	+			14312	GSYNKVFLAK	10	60	376.2137615833149	1125.6194553501448	3	376.2132568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSYNKVFLAK_	ENSG00000099341|ENST00000215071|PSMD8;ENST00000592001.5_1_19:38865430-38871817:+|nuORF	86.88156770896713	0.14892753630261096	3				NaN	NaN	0	NaN	4601	3929	8531
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8533	26.951	NaN	3371.8	30	0	904.41	0.106	+			29767	PHYTTFDG	8	56	469.2064275257034	936.3983021182069	2	469.20587158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PHYTTFDG_	ENSG00000275395|ENST00000616721|FCGBP;ENSG00000275395|ENST00000616721|FCGBP;ENSG00000275395|ENST00000616721|FCGBP;FCGBP-ACSS2|1|fusion;FCGBP-ACSS2|1|fusion;FCGBP-ACSS2|1|fusion;FCGBP-ACSS2|1|fusion;nc|ENSG00000275395|Q9Y6R7|FCGBP;nc|ENSG00000275395|Q9Y6R7|FCGBP;nc|ENSG00000275395|Q9Y6R7|FCGBP;nc|ENSG00000275395|Q9Y6R7|FCGBP	97.47269410471826	0.25484828363392314	3				NaN	NaN	0	NaN	4602	3929	8531
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8534	26.953	NaN	1595.5	30	0	252.38	0.106	+			12540	GEGDPRPEL	9	56	485.2364027181459	968.4582525030918	2	485.2359619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEGDPRPEL_	ENSG00000110237|ENST00000263674|ARHGEF17	72.87924865735499	0.12833875048249987	3				NaN	NaN	0	NaN	4603	3929	8531
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8535	26.955	NaN	2052	30	0	345.4	0.106	+			27029	LYTLPSLR	8	55	481.78752236404904	961.5604917948981	2	481.7871398925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LYTLPSLR_	ENSG00000177731|ENST00000327031|FLII;ENST00000488221.5_1_17:18156710-18157010:-|nuORF;ENST00000578101.5_1_17:18148454-18160363:-|nuORF;FLII|p.K628Rfs*27|1|0.37|ENSG00000177731|chr17:18249178-18249178|T/-|frameshift_variant;FLII|p.S470Afs*32|1|0.36|ENSG00000177731|chr17:18251454-18251454|G/-|frameshift_variant;nc|ENSG00000177731|Q13045-2|FLII;nc|ENSG00000177731|Q13045-3|FLII	40.5726180659479	0.6527593143185008	3				NaN	NaN	0	NaN	4604	3929	8531
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8536	26.956	NaN	3774.9	30	0	1674.9	0.106			+	19725	KDTLHWIPP	9	35	369.5367118845092	NaN	0	369.5365295410156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KDTLHWIPP_	REV__ENSG00000160710|ENST00000368474|ADAR;REV__ENST00000463920.5_1_1:154573515-154574721:-|nuORF;REV__nc|ENSG00000160710|P55265-2|ADAR;REV__nc|ENSG00000160710|P55265-3|ADAR;REV__nc|ENSG00000160710|P55265-4|ADAR;REV__nc|ENSG00000160710|P55265-5|ADAR	32.81241826257853	0.3119040447479903	3				NaN	NaN	0	NaN	4605	3929	8531
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8537	26.958	NaN	1595.8	30	0	124.64	0.036	+			27996	MVTLWRLAV	9	62	544.8192313549243	NaN	0	544.819091796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MVTLWRLAV_	ENSG00000214655|ENST00000604729|ZSWIM8;nc|ENSG00000214655|A7E2V4-2|ZSWIM8;nc|ENSG00000214655|A7E2V4-3|ZSWIM8;nc|ENSG00000214655|A7E2V4-4|ZSWIM8;nc|ENSG00000214655|A7E2V4-5|ZSWIM8;nc|ENSG00000214655|A7E2V4|ZSWIM8;ZSWIM8|p.P689Lfs*46|1|0.15|ENSG00000214655|chr10:73792600-73792600|C/-|frameshift_variant;ZSWIM8|p.R532Pfs*6|1|0.14|ENSG00000214655|chr10:73792129-73792130|-/C|frameshift_variant	31.529811441608018	0.3183796599642538	3				NaN	NaN	0	NaN	4606	3929	8531
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8542	26.972	NaN	3380.8	30	0	406.53	0.214	+			6656	AYVHMVTHF	9	67	560.7659826331158	1119.5174123330314	2	560.7664184570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_AYVHM(Oxidation (M))VTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	68.484700416344	0.1473408039581241	3				NaN	NaN	0	NaN	4608	3932	8541
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8543	26.976	NaN	6150.1	30	0	2891.6	0.106				-1	QVKEMSLIR	9	51	373.87692061491344	NaN	0	373.8766784667969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_QVKEM(Oxidation (M))SLIR_	ENSG00000169231|ENST00000368378|THBS3;ENST00000486260.5_1_1:155170782-155176189:-|nuORF;ENST00000541990.5_1_1:155170782-155174851:-|nuORF;nc|ENSG00000169231|P49746-2|THBS3	29.170058357718403	0.3302935627494407	3				NaN	NaN	0	NaN	4609	3932	8541
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8544	26.978	NaN	2529.6	30	0	813.73	0.106	+			22169	KSSENIGKVL	10	59	537.8127000038579	1073.6108470745157	2	538.3169555664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KSSENIGKVL_	ENSG00000120498|ENST00000374333|TEX11;nc|ENSG00000120498|Q8IYF3-2|TEX11;nc|ENSG00000120498|Q8IYF3|TEX11	29.170058357718403	0.6416167986984785	3				NaN	NaN	0	NaN	4610	3932	8541
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8545	26.98	NaN	2295.9	30	0	243.09	0.106	+			48139	VSVSLFIRS	9	62	504.29851032633513	1006.5824677194703	2	504.29852294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSVSLFIRS_	ENST00000525130.5_1_19:50310340-50310397:-|nuORF;nc|ENSG00000010361|Q9BT04-2|FUZ	31.529811441608018	0.5085848003137583	3				NaN	NaN	0	NaN	4611	3932	8541
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8546	26.982	NaN	1208.6	30	0	110.91	0.106			+	18887	IVIHLLDGL	9	61	496.80976794269156	NaN	0	496.81005859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IVIHLLDGL_	REV__EDNRB|p.Y293Ifs*3|4|0.17|ENSG00000136160|chr13:77901132-77901132|A/-|frameshift_variant;REV__ENSG00000136160|ENST00000646607|EDNRB;REV__nc|ENSG00000136160|P24530-2|EDNRB;REV__nc|ENSG00000136160|P24530-3|EDNRB	35.200714571348534	0.2998460331538257	3				NaN	NaN	0	NaN	4612	3932	8541
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8547	26.983	NaN	3582.5	30	0	1579.1	0.106	+			5494	AVADKVHLMYK	11	56	425.5694664640669	1273.6865699924008	3	425.56903076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AVADKVHLMYK_	ENSG00000121060|ENST00000316881|TRIM25;ENST00000572021.5_1_17:54969063-54989474:-|nuORF	37.50817390946774	0.5920388381045607	3				NaN	NaN	0	NaN	4613	3932	8541
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8548	26.985	NaN	417.18	30	0	45.808	0.041			+	-1	VFPMVKKMYKK	11	32	715.9017333984375	NaN	0	715.9017333984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Oxidation (M)	_VFPM(Oxidation (M))VKKM(Oxidation (M))YKK_	REV__ENSG00000133706|ENST00000394434|LARS1;REV__nc|ENSG00000133706|Q9P2J5-2|LARS1;REV__nc|ENSG00000133706|Q9P2J5-3|LARS1	14.864876125193954	0.456735970842152	3				NaN	NaN	0	NaN	4614	3932	8541
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8554	27	NaN	1134	30	0	312.32	0.214	+			44835	TTSVRKLIL	9	44	344.2250147087356	NaN	0	344.22479248046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTSVRKLIL_	ENSG00000240891|ENST00000636933|PLCXD2;nc|ENSG00000240891|Q0VAA5-2|PLCXD2;nc|ENSG00000240891|Q0VAA5|PLCXD2	14.864876125193954	0.3866709117995958	3				NaN	NaN	0	NaN	4617	3935	8553
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8555	27.003	NaN	1262.7	30	0	145.84	0.106	+			11681	FRALGLRHL	9	40	361.55758230401943	1081.6509175122583	3	361.5567932128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FRALGLRHL_	ENSG00000103249|ENST00000382745|CLCN7;ENST00000563642.6_1_16:1496634-1499487:-|nuORF;ENST00000565092.6_1_16:1496634-1499128:-|nuORF;nc|ENSG00000103249|P51798-2|CLCN7;RBCK1-CLCN7|1|fusion;RBCK1-CLCN7|2|fusion	26.69291269510374	0.5537881896960711	3				NaN	NaN	0	NaN	4618	3935	8553
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8556	27.005	NaN	1448.7	30	0	100.1	0.106	+			18251	IPAPAEKTPV	10	59	511.79710297641833	1021.5796530196367	2	511.7974548339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IPAPAEKTPV_	ENSG00000124575|ENST00000244534|H1-3	54.776311868738084	0.41334902933431344	3				NaN	NaN	0	NaN	4619	3935	8553
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8557	27.007	NaN	2625.7	30	0	314.98	0.106				-1	CDLSAITK	8	47	454.2319886707237	906.4494244082474	2	454.2309265136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_C(Carbamidomethyl (C))DLSAITK_	ENSG00000095464|ENST00000371447|PDE6C;ENSG00000132915|ENST00000255266|PDE6A;ENSG00000133256|ENST00000496514|PDE6B;ENSG00000138735|ENST00000354960|PDE5A;ENST00000508173.5_1_5:149240460-149276122:-|nuORF;ENST00000512494.1_1_4:120423714-120427041:-|nuORF;nc|ENSG00000133256|P35913-2|PDE6B;nc|ENSG00000133256|P35913-3|PDE6B;nc|ENSG00000138735|O76074-2|PDE5A;PDE6A|p.A811Gfs*10|1|0.37|ENSG00000132915|chr5:149863193-149863193|G/-|frameshift_variant	71.29570347882199	0.39610197767395533	3				NaN	NaN	0	NaN	4620	3935	8553
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8558	27.009	NaN	2610.5	30	0	230.23	0.106	+			50714	YEGAKVKVL	9	60	503.8002767811181	NaN	0	503.8000793457031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YEGAKVKVL_	ENSG00000137497|ENST00000393695|NUMA1;nc|ENSG00000137497|Q14980-2|NUMA1;nc|ENSG00000137497|Q14980-3|NUMA1;nc|ENSG00000137497|Q14980-4|NUMA1;NUMA1|p.K1766Rfs*2|1|0.39|ENSG00000137497|chr11:72007357-72007357|G/-|frameshift_variant;NUMA1|p.L1786Pfs*18|1|0.23|ENSG00000137497|chr11:72007295-72007296|-/G|frameshift_variant	44.377184641726394	0.24544280798894275	3				NaN	NaN	0	NaN	4621	3935	8553
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8559	27.01	NaN	1576.4	30	0	216.51	0.106			+	3488	ASSGTLVAAPL	11	51	493.77950114414324	NaN	0	493.78009033203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASSGTLVAAPL_	REV__ENST00000480424.6_1_16:630268-633631:+|nuORF	34.172542307311794	0.4131234684587831	3				NaN	NaN	0	NaN	4622	3935	8553
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8560	27.012	NaN	1356.1	30	0	145.18	0.035	+			46079	VCSGTVAGAVI	11	54	488.7598876953125	NaN	0	488.7598876953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VCSGTVAGAVI_	ENSG00000014919|ENST00000016171|COX15;nc|ENSG00000014919|Q7KZN9-2|COX15	32.81241826257853	0.4191849651971536	3				NaN	NaN	0	NaN	4623	3935	8553
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8568	27.03	NaN	4532.5	30	0	883.58	0.214	+			40564	SVAECQLMK	9	69	533.2581551545155	1064.501757375831	2	533.2582397460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SVAEC(Carbamidomethyl (C))QLMK_	ENSG00000105221|ENST00000392038|AKT2;ENST00000391844.8_1_19:40739781-40791100:-|nuORF;ENST00000537834.5_1_19:40745726-40771198:-|nuORF;nc|ENSG00000105221|P31751-2|AKT2	77.31757898189308	0.1091473830098891	3				NaN	NaN	0	NaN	4628	3938	8567
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8569	27.034	NaN	2392.8	30	0	590.2	0.106				-1	 	0	40	322.19386621469073	642.3731794961815	2	322.1938171386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4629	3938	8567
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8570	27.036	NaN	3590.2	30	0	643.88	0.106	+			6294	AVSTFAMVK	9	58	485.2579481675334	968.5013434018668	2	485.2574462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_AVSTFAM(Oxidation (M))VK_	ENSG00000172893|ENST00000355527|DHCR7;ENST00000534701.1_1_11:71149825-71152361:-|nuORF	84.9155231211612	0.07920012719736333	3				NaN	NaN	0	NaN	4630	3938	8567
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8571	27.038	NaN	4110.2	30	0	996.25	0.106	+			31877	QPYQIPITG	9	58	508.77480822987025	1015.5350635265405	2	508.7749328613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QPYQIPITG_	ENSG00000141452|ENST00000269221|RMC1;ENST00000589215.5_1_18:21087981-21111645:+|nuORF	37.15910966729921	0.4535818937225704	3				NaN	NaN	0	NaN	4631	3938	8567
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8572	27.04	NaN	3185	30	0	636.94	0.106	+			1944	AISSTVLGK	9	59	438.26402553055595	874.5134981279119	2	438.263427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AISSTVLGK_	ENSG00000105976|ENST00000397752|MET;nc|ENSG00000105976|P08581-2|MET	40.77816245573522	0.41113185337114944	3				NaN	NaN	0	NaN	4632	3938	8567
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8573	27.041	NaN	2077.8	30	0	560.27	0.106				-1	 	0	35	351.1968441329425	700.379135332685	2	351.1966247558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4633	3938	8567
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8574	27.043	NaN	1550.5	30	0	753.35	0.037	+			25103	LLPKAMIEVE	10	36	381.5540075712669	1141.6401933140007	3	381.55340576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LLPKAMIEVE_	ENSG00000107862|ENST00000369983|GBF1;GBF1|p.D1798Tfs*11|1|0.46|ENSG00000107862|chr10:102382143-102382143|C/-|frameshift_variant;GBF1|p.S1486Tfs*46|1|0.17|ENSG00000107862|chr10:102377105-102377106|-/C|frameshift_variant;nc|ENSG00000107862|Q92538-1|GBF1;nc|ENSG00000107862|Q92538-2|GBF1;nc|ENSG00000107862|Q92538-3|GBF1	22.579656572578934	0.6954366826851017	3				NaN	NaN	0	NaN	4634	3938	8567
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8581	27.06	NaN	2711	30	0	631.83	0.214	+			23192	KWTLLQEQG	9	68	551.7968379945956	1101.5791230559912	2	551.7969360351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KWTLLQEQG_	CON__P02538;CON__P04259;CON__P13647;CON__P48668;ENSG00000170465|ENST00000252250|KRT6C;ENSG00000185479|ENST00000252252|KRT6B;ENSG00000186081|ENST00000252242|KRT5;ENSG00000205420|ENST00000330722|KRT6A;ENST00000552629.5_1_12:52910419-52914113:-|nuORF	37.81151784470057	0.4459294069877048	3				NaN	NaN	0	NaN	4638	3941	8580
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8582	27.063	NaN	1527.4	30	0	230.42	0.106	+			5842	AVIIVGSAK	9	52	429.2766458190516	856.5387387049033	2	429.2760314941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVIIVGSAK_	ENSG00000138074|ENST00000310574|SLC5A6;ENST00000464538.1_1_2:27428216-27429031:-|nuORF;ENST00000488743.6_1_2:27425876-27434347:-|nuORF	79.45101966838831	0.09992237243120712	3				NaN	NaN	0	NaN	4639	3941	8580
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8583	27.065	NaN	1385.2	30	0	288.69	0.106			+	-1	CLACMYSMY	9	50	607.7209200885194	1213.4272872438387	2	607.7205200195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C),Oxidation (M)	_C(Carbamidomethyl (C))LAC(Carbamidomethyl (C))MYSM(Oxidation (M))Y_	REV__ENST00000498309.1_1_5:132203011-132203167:+|nuORF	25.450171626174864	0.5654022654467333	3				NaN	NaN	0	NaN	4640	3941	8580
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8584	27.067	NaN	2172.4	30	0	168.68	0.106	+			37756	SLVFDLHE	8	55	480.2465719176713	NaN	0	480.2467346191406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLVFDLHE_	ENST00000531443.5_1_8:107696561-107715155:+|nuORF	57.81127852772723	1.7418937515398478	3				NaN	NaN	0	NaN	4641	3941	8580
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8585	27.069	NaN	2816.8	30	0	257.96	0.106	+			26790	LVSAYHNKY	9	64	547.7834346542237	1093.5523163752473	2	547.7831420898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LVSAYHNKY_	tr|U7SQU8|U7SQU8_FUSNUAAA-ATPase-likedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01805PE=4SV=1	66.42927471994793	0.16001998865088202	3				NaN	NaN	0	NaN	4642	3941	8580
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8586	27.071	NaN	1852.2	30	0	202.66	0.036	+			36029	SEIPQTERM	9	61	545.7640564902708	1089.5135600473416	2	545.7646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SEIPQTERM_	ENSG00000205323|ENST00000336133|SARNP;ENST00000552207.1_1_12:56188062-56211500:-|nuORF	29.170058357718403	0.5306379469863586	3				NaN	NaN	0	NaN	4643	3941	8580
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8591	27.085	NaN	5419.9	30	0	930.81	0.215	+			21229	KLIDRTESL	9	68	537.8127000038579	1073.6108470745157	2	537.8121337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KLIDRTESL_	ENSG00000130592|ENST00000311604|LSP1;ENST00000485341.5_1_11:1902588-1908790:+|nuORF;nc|ENSG00000130592|P33241-2|LSP1;nc|ENSG00000130592|P33241-3|LSP1	58.2462437865262	0.22823408064396822	3				NaN	NaN	0	NaN	4645	3944	8590
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8592	27.088	NaN	2797	30	0	287.79	0.106	+			28782	NPENSELKY	9	64	547.2628810924056	NaN	0	547.2625732421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NPENSELKY_	ENSG00000141448|ENST00000269216|GATA6;nc|ENSG00000141448|Q92908-2|GATA6	112.41091882917199	0.007519870935348052	3				NaN	NaN	0	NaN	4646	3944	8590
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8593	27.09	NaN	2029.1	30	0	235.09	0.106			+	50294	WSIDLEEL	8	63	502.7492854123385	1003.484017891477	2	502.7484130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_WSIDLEEL_	REV__ENSG00000114248|ENST00000316428|LRRC31;REV__nc|ENSG00000114248|Q6UY01-3|LRRC31;REV__nc|ENSG00000114248|Q6UY01-4|LRRC31	50.0245360154114	0.5941082100236891	3				NaN	NaN	0	NaN	4647	3944	8590
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8594	27.092	NaN	3056	30	0	212.59	0.106			+	-1	EGVTMAKKQI	10	63	560.8057698838007	NaN	0	560.806884765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_EGVTM(Oxidation (M))AKKQI_	REV__ENSG00000127663|ENST00000159111|KDM4B;REV__KDM4B|p.P511Lfs*8|1|0.14|ENSG00000127663|chr19:5131288-5131288|C/-|frameshift_variant;REV__nc|ENSG00000127663|O94953-2|KDM4B;REV__nc|ENSG00000127663|O94953|KDM4B	42.86426827375447	0.3507156137006061	3				NaN	NaN	0	NaN	4648	3944	8590
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8595	27.094	NaN	2218.6	30	0	163.32	0.106	+			27645	MPRVQTQQY	9	67	575.7883800163323	1149.5622070994646	2	575.7881469726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MPRVQTQQY_	ENSG00000138674|ENST00000395310|SEC31A;nc|ENSG00000138674|O94979-10|SEC31A;nc|ENSG00000138674|O94979-2|SEC31A;nc|ENSG00000138674|O94979-3|SEC31A;nc|ENSG00000138674|O94979-4|SEC31A;nc|ENSG00000138674|O94979-6|SEC31A;nc|ENSG00000138674|O94979-7|SEC31A;nc|ENSG00000138674|O94979-8|SEC31A;nc|ENSG00000138674|O94979-9|SEC31A;SEC31A|p.P1058Qfs*62|1|0.4|ENSG00000138674|chr4:82827487-82827487|G/-|frameshift_variant	104.01359247289065	0.03510646158778409	3				NaN	NaN	0	NaN	4649	3944	8590
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8596	27.095	NaN	1738.2	30	0	304.53	0.106			+	9494	EKTGTTAVSR	10	56	525.2848941982168	1048.5552354632334	2	525.2848510742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EKTGTTAVSR_	REV__ENST00000592259.1_1_19:12875564-12875981:-|nuORF	30.568863376406313	0.6301935916953115	3				NaN	NaN	0	NaN	4650	3944	8590
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8597	27.097	NaN	1089.9	30	0	57.985	0.034	+			37416	SLGLSEQKA	9	53	466.7577479664552	931.5009429997104	2	466.7565002441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SLGLSEQKA_	ENSG00000172053|ENST00000306125|QARS1;ENST00000482438.2_1_3:49141637-49142166:-|nuORF;nc|ENSG00000172053|P47897-2|QARS1	39.252832667884924	0.4290233611298554	3				NaN	NaN	0	NaN	4651	3944	8590
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8603	27.113	NaN	10147	30	0	4950.2	0.214	+			6216	AVQTAAKELLK	11	53	391.24012924989717	1170.6985583498915	3	391.2398376464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVQTAAKELLK_	ENSG00000123992|ENST00000273075|DNPEP;ENST00000430206.5_1_2:220251659-220252065:-|nuORF;ENST00000460963.5_1_2:220250088-220252486:-|nuORF;ENST00000523527.5_1_2:220250965-220252516:-|nuORF;nc|ENSG00000123992|Q9ULA0-2|DNPEP	47.227680397652996	0.4590463137409202	3				NaN	NaN	0	NaN	4654	3947	8602
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8604	27.117	NaN	4835	30	0	1214.4	0.106	+			37148	SITTVQIQK	9	64	509.3010190666984	1016.5874852001969	2	509.30120849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SITTVQIQK_	ENST00000394091.5_1_3:101177876-101232004:-|nuORF	90.60085204095205	0.06317133949006545	3				NaN	NaN	0	NaN	4655	3947	8602
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8605	27.119	NaN	1790.2	30	0	250.7	0.106			+	-1	MLDRNERR	8	60	553.2803454295627	1104.5461379259252	2	553.2811889648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))LDRNERR_	REV__ENST00000511847.2_1_5:112540219-112540267:-|nuORF	45.9519527083369	0.6193794311207887	3				NaN	NaN	0	NaN	4656	3947	8602
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8606	27.121	NaN	2995.8	30	0	253.79	0.106			+	26318	LSVSTASQDNL	11	65	567.7858919345039	1133.5572309358076	2	567.787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSVSTASQDNL_	REV__VPS13D|p.R1061Q|1|0.21|ENSG00000048707|chr1:12276770-12276770|G/A|missense_variant	62.107414245175825	0.30464354921554965	3				NaN	NaN	0	NaN	4657	3947	8602
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8607	27.123	NaN	1452.5	30	0	188.11	0.106	+			4778	ATNGPPVLVK	10	52	498.2983544826015	994.582156032003	2	498.2983703613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATNGPPVLVK_	ENSG00000170004|ENST00000330494|CHD3;ENST00000439235.5_1_17:7812698-7814900:+|nuORF;ENST00000470531.5_3_17:7807732-7814900:+|nuORF;ENST00000481999.1_1_17:7813558-7814900:+|nuORF;nc|ENSG00000170004|Q12873-2|CHD3;nc|ENSG00000170004|Q12873-3|CHD3	35.15202426646627	0.5927656479315102	3				NaN	NaN	0	NaN	4658	3947	8602
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8608	27.124	NaN	1194.2	30	0	121.82	0.106				-1	VVCDNGTGFVK	11	56	598.2922104840477	1194.5698680348953	2	598.2931518554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_VVC(Carbamidomethyl (C))DNGTGFVK_	ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2	25.125986553469783	0.7262400895305658	3				NaN	NaN	0	NaN	4659	3947	8602
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8609	27.126	NaN	1821.1	30	0	163.3	0.036			+	30933	QELQDLNVR	9	62	557.7970527296794	1113.5795525261587	2	557.7971801757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QELQDLNVR_	REV__ENSG00000148143|ENST00000277225|ZNF462;REV__nc|ENSG00000148143|Q96JM2-2|ZNF462;REV__nc|ENSG00000148143|Q96JM2-3|ZNF462	47.95952297671804	0.32689736945648856	3				NaN	NaN	0	NaN	4660	3947	8602
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8618	27.146	NaN	3307.3	30	0	359.31	0.214	+			16960	HPQAINQQF	9	65	541.7737111817646	NaN	0	541.7733764648438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HPQAINQQF_	ENSG00000119042|ENST00000417098|SATB2;ENST00000483346.2_1_2:200213306-200233427:-|nuORF;nc|ENSG00000119042|Q9UPW6-2|SATB2	102.7733458925114	0.016223397287307425	3				NaN	NaN	0	NaN	4666	3950	8617
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8619	27.15	NaN	2533.8	30	0	284.77	0.106	+			38433	SSALHSLLK	9	56	478.2827582712019	954.5509636092038	2	478.2818298339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSALHSLLK_	ENSG00000164944|ENST00000297591|VIRMA;ENST00000521080.5_1_8:95511544-95524374:-|nuORF;nc|ENSG00000164944|Q69YN4-3|VIRMA	82.7504851949679	0.08565546331141553	3				NaN	NaN	0	NaN	4667	3950	8617
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8620	27.152	NaN	3080.9	30	0	377.71	0.106	+			23381	LAADCAHEL	9	66	500.23243548221177	998.4503180312236	2	500.2320556640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LAADC(Carbamidomethyl (C))AHEL_	ENSG00000157379|ENST00000288111|DHRS1;ENST00000558340.1_1_14:24760067-24761569:-|nuORF;ENST00000561137.5_1_14:24760413-24761527:-|nuORF;ENST00000561273.5_1_14:24760714-24761569:-|nuORF	66.42927471994793	0.16001998865088202	3				NaN	NaN	0	NaN	4668	3950	8617
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8621	27.154	NaN	2376	30	0	827.29	0.106			+	1390	AEVLNNVQLIK	11	61	620.8672539252447	1239.7199549172892	2	620.8667602539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEVLNNVQLIK_	REV__ENSG00000095777|ENST00000642920|MYO3A;REV__MYO3A|p.H990Ifs*9|1|0.26|ENSG00000095777|chr10:26157482-26157482|C/-|frameshift_variant;REV__MYO3A|p.M1192*|5|0.25|ENSG00000095777|chr10:26173831-26173831|A/-|frameshift_variant;REV__MYO3A|p.N525Kfs*14|1|0.39|ENSG00000095777|chr10:26096385-26096386|-/A|frameshift_variant;REV__MYO3A|p.N727Kfs*9|1|0.22|ENSG00000095777|chr10:26128448-26128449|-/A|frameshift_variant	54.343338949951054	0.37394860514808087	3				NaN	NaN	0	NaN	4669	3950	8617
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8622	27.155	NaN	1504.7	30	0	199.97	0.106			+	4989	ATRSSLLLF	9	37	336.53422680595446	1006.5808510180634	3	336.5340576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATRSSLLLF_	REV__ADAMTSL1|p.F929Sfs*29|1|0.17|ENSG00000178031|chr9:18777009-18777009|C/-|frameshift_variant;REV__ADAMTSL1|p.R1713Gfs*28|1|0.2|ENSG00000178031|chr9:18906864-18906864|C/-|frameshift_variant;REV__ENSG00000178031|ENST00000380548|ADAMTSL1;REV__nc|ENSG00000178031|Q8N6G6-1|ADAMTSL1;REV__nc|ENSG00000178031|Q8N6G6-2|ADAMTSL1;REV__nc|ENSG00000178031|Q8N6G6-4|ADAMTSL1	18.324413293986947	0.6112419832031293	3				NaN	NaN	0	NaN	4670	3950	8617
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8623	27.157	NaN	2318.9	30	0	379.84	0.037			+	26539	LTRGRMPLSS	10	48	373.20969428527314	NaN	0	373.2098693847656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LTRGRMPLSS_	REV__FHDC1|p.R151M|1|0.43|ENSG00000137460|chr4:152943509-152943509|G/T|missense_variant	20.83715455343099	0.4201028297492154	3				NaN	NaN	0	NaN	4671	3950	8617
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8624	27.158	NaN	1541.6	30	0	205.69	0.141	+			1912	AIQNPTMINK	10	58	565.3054845557157	NaN	0	565.30419921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AIQNPTMINK_	ENSG00000167182|ENST00000376741|SP2;nc|ENSG00000167182|Q02086-2|SP2	80.91624569148213	0.09495298207812954	3				NaN	NaN	0	NaN	4672	3950	8617
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8631	27.176	NaN	3836.4	30	0	569.91	0.214			+	9141	EGLSLYRDI	9	66	533.2830142631799	1064.5514755931597	2	533.28271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EGLSLYRDI_	REV__ENSG00000110514|ENST00000706887|MADD;REV__nc|ENSG00000110514|Q8WXG6-2|MADD;REV__nc|ENSG00000110514|Q8WXG6-3|MADD;REV__nc|ENSG00000110514|Q8WXG6-4|MADD;REV__nc|ENSG00000110514|Q8WXG6-5|MADD;REV__nc|ENSG00000110514|Q8WXG6-6|MADD;REV__nc|ENSG00000110514|Q8WXG6-7|MADD;REV__nc|ENSG00000110514|Q8WXG6-8|MADD;REV__nc|ENSG00000110514|Q8WXG6|MADD	49.44154591367651	0.3095138337212152	3				NaN	NaN	0	NaN	4676	3953	8630
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8632	27.179	NaN	3198.3	30	0	378.92	0.106	+			12467	GEDKTSAQVSL	11	60	567.7858919345039	1133.5572309358076	2	567.785888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEDKTSAQVSL_	ENSG00000110002|ENST00000456829|VWA5A;nc|ENSG00000110002|O00534-2|VWA5A;nc|ENSG00000110002|O00534-3|VWA5A;nc|ENSG00000110002|O00534-4|VWA5A;VWA5A|p.D273Ifs*24|1|0.19|ENSG00000110002|chr11:124123014-124123014|A/-|frameshift_variant;VWA5A|p.D571Mfs*3|1|0.56|ENSG00000110002|chr11:124137094-124137094|A/-|frameshift_variant;VWA5A|p.G366Afs*38|1|0.21|ENSG00000110002|chr11:124123733-124123733|G/-|frameshift_variant	63.69406221917213	0.2904805327065929	3				NaN	NaN	0	NaN	4677	3953	8630
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8633	27.181	NaN	2634.6	30	0	220.67	0.106			+	23661	LARYAGPCR	9	64	503.766948014758	1005.519343096316	2	503.76605224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LARYAGPCR_	REV__ENSG00000174939|ENST00000308748|ASPHD1	56.72105179125745	0.24094814563026265	3				NaN	NaN	0	NaN	4678	3953	8630
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8634	27.183	NaN	1955.9	30	0	506.16	0.106	+			14539	GTDVGTVLK	9	56	445.25310063379385	NaN	0	445.2531433105469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTDVGTVLK_	ENSG00000012171|ENST00000616701|SEMA3B;ENSG00000075213|ENST00000265362|SEMA3A;ENST00000419007.5_1_3:50311763-50312407:+|nuORF;ENST00000456210.5_1_3:50311877-50313205:+|nuORF;nc|ENSG00000012171|Q13214-2|SEMA3B;SEMA3B|p.R595Afs*16|1|0.43|ENSG00000012171|chr3:50275779-50275779|C/-|frameshift_variant	63.53385203322761	0.134247007536971	3				NaN	NaN	0	NaN	4679	3953	8630
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8635	27.185	NaN	4304.2	30	0	2398.7	0.106	+			37616	SLPTRINIMN	10	43	386.8805980398481	1157.6199647197443	3	386.8799743652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SLPTRINIMN_	ENSG00000081985|ENST00000674203|IL12RB2;nc|ENSG00000081985|Q99665-2|IL12RB2;nc|ENSG00000081985|Q99665-3|IL12RB2	26.063383197487333	0.6669871633831898	3				NaN	NaN	0	NaN	4680	3953	8630
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8636	27.187	NaN	1930.9	30	0	170.39	0.106			+	24569	LGNGPGGPGAL	11	53	455.2429468624239	NaN	0	455.242919921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LGNGPGGPGAL_	REV__ENSG00000152822|ENST00000282753|GRM1;REV__ENST00000492807.6_1_6:146720717-146755929:+|nuORF;REV__ENST00000507907.1_1_6:146747775-146755929:+|nuORF	42.396135135203025	0.3699325281549567	3				NaN	NaN	0	NaN	4681	3953	8630
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8637	27.189	NaN	1624.6	30	0	236.7	0.033			+	23473	LAETARAI	8	50	422.7487205600512	843.4828881869024	2	422.74798583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LAETARAI_	REV__ENSG00000163462|ENST00000334634|TRIM46;REV__ENST00000468878.1_1_1:155147264-155152278:+|nuORF;REV__nc|ENSG00000163462|Q7Z4K8-2|TRIM46;REV__nc|ENSG00000163462|Q7Z4K8-3|TRIM46;REV__nc|ENSG00000163462|Q7Z4K8-4|TRIM46;REV__nc|ENSG00000163462|Q7Z4K8-5|TRIM46;REV__TRIM46|p.H455Ifs*32|1|0.26|ENSG00000163462|chr1:155179703-155179703|C/-|frameshift_variant;REV__TRIM46|p.L718Pfs*28|1|0.3|ENSG00000163462|chr1:155184057-155184058|-/C|frameshift_variant	51.33545320467046	0.5859736979383976	3				NaN	NaN	0	NaN	4682	3953	8630
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8647	27.21	NaN	4605.5	30	0	920.19	0.214	+			39297	STASMGGWTK	10	74	513.2400686588576	1024.465584384515	2	513.2403564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STASMGGWTK_	ENSG00000166348|ENST00000687698|USP54;ENST00000498143.5_1_10:75279553-75335416:-|nuORF;nc|ENSG00000166348|Q70EL1-6|USP54;nc|ENSG00000166348|Q70EL1-7|USP54;USP54|p.R831Tfs*6|1|0.07|ENSG00000166348|chr10:73519973-73519983|CAGGGCAAGTC/-|frameshift_variant	101.45984612302182	0.07336148045341315	3				NaN	NaN	0	NaN	4689	3956	8646
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8648	27.214	NaN	6111.2	30	0	2653.2	0.106	+			48693	VTTGSEGLLK	10	65	502.784410719886	1003.554268506572	2	502.784912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTTGSEGLLK_	ENSG00000134987|ENST00000513710|WDR36;ENST00000505303.5_1_5:110428043-110447004:+|nuORF;nc|ENSG00000134987|Q8NI36|WDR36	59.93077597824379	0.36646980200755325	3				NaN	NaN	0	NaN	4690	3956	8646
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8649	27.216	NaN	1453.9	30	0	235.7	0.106	+			1151	AEMTTRMV	8	52	469.7257995605469	NaN	0	469.7257995605469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEMTTRMV_	ENSG00000205220|ENST00000358514|PSMB10	54.776311868738084	1.7418937515398478	3				NaN	NaN	0	NaN	4691	3956	8646
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8650	27.218	NaN	1856	30	0	208.05	0.034	+			11320	FLAFYVLS	8	51	480.2667983488381	NaN	0	480.2669982910156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FLAFYVLS_	ENST00000497571.5_1_10:3819016-3819262:-|nuORF	54.76467175910256	1.7418937515398478	3				NaN	NaN	0	NaN	4692	3956	8646
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8656	27.234	NaN	3320.2	30	0	1585	0.214	+			48686	VTTGGMVLK	9	57	453.26013810626995	904.5057232793399	2	453.259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTTGGMVLK_	ENSG00000173369|ENST00000509305|C1QB;nc|ENSG00000173369|P02746|C1QB	29.170058357718403	0.5306379469863586	3				NaN	NaN	0	NaN	4695	3959	8655
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8657	27.237	NaN	1333.1	30	0	210.53	0.106	+			15628	GVLDRMMKK	9	56	539.2992928864749	NaN	0	539.3001098632812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GVLDRMMKK_	ENSG00000163191|ENST00000271638|S100A11;ENST00000478109.1_1_1:152005140-152020324:-|nuORF	32.75053402867276	0.3122164853807509	3				NaN	NaN	0	NaN	4696	3959	8655
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8658	27.239	NaN	2644.2	30	0	253.69	0.106	+			6615	AYQKVVAGV	9	57	467.7719789246187	933.5294049160374	2	467.7719421386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AYQKVVAGV_	ENSG00000223609|ENST00000650601|HBD;ENSG00000244734|ENST00000335295|HBB	82.30502934623384	0.08758161712619916	3				NaN	NaN	0	NaN	4697	3959	8655
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8659	27.241	NaN	1616.6	30	0	152.78	0.106	+			7583	DILHYSGH	8	57	471.2292276125009	940.4439022918018	2	471.22979736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DILHYSGH_	ENSG00000188167|ENST00000342462|TMPPE;nc|ENSG00000188167|Q6ZT21-2|TMPPE	40.5726180659479	0.6527593143185008	3				NaN	NaN	0	NaN	4698	3959	8655
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8660	27.243	NaN	1261.2	30	0	220.97	0.035			+	-1	KVAMVLVDP	9	52	494.27822979980874	NaN	0	494.2776794433594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_KVAM(Oxidation (M))VLVDP_	REV__ENSG00000112159|ENST00000369393|MDN1;REV__MDN1|p.E2692*|2|0.32|ENSG00000112159|chr6:89706133-89706134|-/A|frameshift_variant;REV__MDN1|p.F2691Lfs*7|2|0.37|ENSG00000112159|chr6:89706134-89706134|A/-|frameshift_variant;REV__MDN1|p.K2642Nfs*17|2|0.29|ENSG00000112159|chr6:89707449-89707449|T/-|frameshift_variant;REV__MDN1|p.L4077Cfs*15|1|0.16|ENSG00000112159|chr6:89680625-89680625|G/-|frameshift_variant;REV__MDN1|p.L5278Ffs*6|1|0.18|ENSG00000112159|chr6:89652273-89652274|-/A|frameshift_variant	30.503639358989545	0.3235605894931338	3				NaN	NaN	0	NaN	4699	3959	8655
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8665	27.257	NaN	3887.2	30	0	732.78	0.214	+			31489	QLDAANCLGI	10	57	509.25384562495225	1016.4931383167045	2	509.25390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QLDAANCLGI_	ENSG00000168427|ENST00000409223|KLHL30	62.107414245175825	0.3466735403679669	3				NaN	NaN	0	NaN	4701	3962	8664
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8666	27.261	NaN	2651.4	30	0	282.82	0.106			+	11955	FVKNMMQM	8	64	522.736355671874	1043.4581584105479	2	522.7413330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_FVKNMMQM(Oxidation (M))_	REV__ENSG00000163655|ENST00000496455|GMPS;REV__GMPS|p.S473Lfs*26|1|0.37|ENSG00000163655|chr3:155922281-155922281|T/-|frameshift_variant	54.76467175910256	0.5536104764165384	3				NaN	NaN	0	NaN	4702	3962	8664
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8667	27.263	NaN	5454.6	30	0	1716.3	0.106			+	40664	SVASHRSPHQI	11	47	406.8829760436298	1217.6270987310895	3	406.8824157714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVASHRSPHQI_	REV__ENST00000597705.5_1_19:51301978-51305485:-|nuORF	31.634271133179894	0.6579734920221648	3				NaN	NaN	0	NaN	4703	3962	8664
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8668	27.265	NaN	2426.7	30	0	341.61	0.106			+	-1	QVCPQRRGV	9	62	550.2930012388864	1098.5714495445727	2	550.794189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_QVC(Carbamidomethyl (C))PQRRGV_	REV__ENSG00000162591|ENST00000356575|MEGF6;REV__MEGF6|p.A1440Gfs*4|1|0.29|ENSG00000162591|chr1:3493839-3493840|-/C|frameshift_variant;REV__MEGF6|p.A1440Hfs*78|2|0.41|ENSG00000162591|chr1:3493840-3493840|C/-|frameshift_variant;REV__MEGF6|p.R1079Gfs*195|1|0.36|ENSG00000162591|chr1:3498488-3498488|G/-|frameshift_variant	38.80614096846853	0.43426287593479557	3				NaN	NaN	0	NaN	4704	3962	8664
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8669	27.266	NaN	2293.1	30	0	201.72	0.036	+			34353	RTQGLMIMK	9	45	359.8686643979112	1076.5841637939336	3	359.8685302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RTQGLMIMK_	ENSG00000137275|ENST00000259808|RIPK1;nc|ENSG00000137275|Q13546-2|RIPK1	48.601550744091256	0.3193666407755445	3				NaN	NaN	0	NaN	4705	3962	8664
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8676	27.283	NaN	3797.3	30	0	311.24	0.214	+			12870	GEQVAVKSL	9	54	465.7663203692237	929.5180878052474	2	465.76611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEQVAVKSL_	ENSG00000162434|ENST00000342505|JAK1;ENST00000481702.1_1_1:65305238-65306936:-|nuORF	66.9202029811203	0.15592758990009112	3				NaN	NaN	0	NaN	4709	3965	8675
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8677	27.286	NaN	6448.7	30	0	1818	0.106			+	29868	PLGALQQGS	9	44	435.73771556573996	869.4608781982799	2	435.73736572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PLGALQQGS_	REV__ENSG00000188282|ENST00000697321|RUFY4;REV__RUFY4|p.E426Rfs*11|1|0.38|ENSG00000188282|chr2:218076453-218076453|T/-|frameshift_variant	74.25504064058377	0.12238981753128622	3				NaN	NaN	0	NaN	4710	3965	8675
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8678	27.288	NaN	3092.2	30	0	266.41	0.106	+			49794	VYSHVIQKL	9	60	543.8191371578066	1085.6237213824131	2	544.3212280273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYSHVIQKL_	ENSG00000135094|ENST00000257549|SDS;SDS|p.G305Afs*18|1|0.17|ENSG00000135094|chr12:113393014-113393014|C/-|frameshift_variant	52.936696900407355	0.27249468807391813	3				NaN	NaN	0	NaN	4711	3965	8675
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8679	27.29	NaN	2281.8	30	0	256.14	0.106	+			1399	AEVRVYGGE	9	63	490.24614690146063	978.4777408697213	2	490.2450866699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEVRVYGGE_	ENSG00000162302|ENST00000334205|RPS6KA4;nc|ENSG00000162302|O75676-2|RPS6KA4	51.19269402634007	0.2889735674168909	3				NaN	NaN	0	NaN	4712	3965	8675
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8680	27.292	NaN	1248	30	0	84.767	0.037				-1	MIQPEKLLL	9	50	571.8294059592642	NaN	0	571.8298950195312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))M(Oxidation (M))IQPEKLLL_	ENSG00000089012|ENST00000303415|SIRPG;nc|ENSG00000089012|Q9P1W8-2|SIRPG;nc|ENSG00000089012|Q9P1W8-3|SIRPG;nc|ENSG00000089012|Q9P1W8-4|SIRPG;SIRPG|p.V150Wfs*15|1|0.31|ENSG00000089012|chr20:1636489-1636489|G/-|frameshift_variant	37.15910966729921	0.2899585034171616	3				NaN	NaN	0	NaN	4713	3965	8675
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8688	27.31	NaN	5019.6	30	0	602.72	0.214	+			15668	GVMRVGLVAK	10	64	515.3155928713524	1028.6166328095046	2	515.31591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVMRVGLVAK_	ENSG00000129351|ENST00000588657|ILF3;ENST00000587928.5_1_19:10781281-10792148:+|nuORF;nc|ENSG00000129351|Q12906-2|ILF3;nc|ENSG00000129351|Q12906-3|ILF3;nc|ENSG00000129351|Q12906-4|ILF3;nc|ENSG00000129351|Q12906-5|ILF3;nc|ENSG00000129351|Q12906-6|ILF3;nc|ENSG00000129351|Q12906|ILF3	90.36981228632155	0.12895663264417576	3				NaN	NaN	0	NaN	4718	3968	8687
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8689	27.313	NaN	4077.7	30	0	551.43	0.106	+			42313	TAFGHPQAY	9	62	496.2357475698958	990.4569422065916	2	496.2351989746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAFGHPQAY_	ENSG00000130340|ENST00000392185|SNX9	62.107414245175825	0.1960472003779324	3				NaN	NaN	0	NaN	4719	3968	8687
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8690	27.315	NaN	1333.4	30	0	101.88	0.106			+	-1	QSMVIPRIQM	10	57	609.8201543708859	1217.6257558085717	2	609.81884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_QSM(Oxidation (M))VIPRIQM_	REV__ENSG00000054277|ENST00000366554|OPN3;REV__ENST00000463155.5_1_1:241757732-241840646:-|nuORF;REV__nc|ENSG00000203668|Q9H1Y3-2|OPN3	42.86426827375447	0.522752283233888	3				NaN	NaN	0	NaN	4720	3968	8687
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8691	27.317	NaN	1533.1	30	0	108.19	0.106	+			16215	HEDKIRVVL	9	54	554.8279875892849	NaN	0	554.8279418945312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HEDKIRVVL_	EHD1|p.E248Rfs*50|1|0.19|ENSG00000110047|chr11:64860098-64860098|G/-|frameshift_variant;ENSG00000024422|ENST00000263277|EHD2;ENSG00000110047|ENST00000320631|EHD1;nc|ENSG00000024422|Q9NZN4-2|EHD2	47.657333605630114	0.2228375344433429	3				NaN	NaN	0	NaN	4721	3968	8687
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8692	27.319	NaN	1062.9	30	0	106.4	0.106				-1	KMQKSSHTAV	10	54	566.7936401367188	NaN	0	566.7936401367188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_KM(Oxidation (M))QKSSHTAV_	CNTLN|p.I1388Nfs*3|1|0.3|ENSG00000044459|chr9:17502587-17502588|-/A|frameshift_variant;CNTLN|p.K1130Rfs*14|1|0.25|ENSG00000044459|chr9:17462996-17462996|A/-|frameshift_variant;CNTLN|p.M1308*|1|0.36|ENSG00000044459|chr9:17484355-17484355|A/-|frameshift_variant;CNTLN|p.M1308Nfs*9|1|0.46|ENSG00000044459|chr9:17484354-17484355|-/A|frameshift_variant;CNTLN|p.T1324Dfs*27|1|0.14|ENSG00000044459|chr9:17484406-17484407|-/A|frameshift_variant;ENSG00000044459|ENST00000380647|CNTLN;nc|ENSG00000044459|Q9NXG0|CNTLN	39.252832667884924	0.37128895876774715	3				NaN	NaN	0	NaN	4722	3968	8687
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8693	27.321	NaN	1403.1	30	0	108.69	0.036				-1	AYVHMVTHF	9	56	560.7659826331158	1119.5174123330314	2	560.7665405273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_AYVHM(Oxidation (M))VTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	37.15910966729921	0.4535818937225704	3				NaN	NaN	0	NaN	4723	3968	8687
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8694	27.321	NaN	1760.1	30	0	120.29	0.14			+	11612	FPTGVGVMVQ	10	63	517.7722550696845	NaN	0	517.7714233398438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FPTGVGVMVQ_	REV__ENSG00000131183|ENST00000324417|SLC34A1	47.657333605630114	0.3204131577145918	3				NaN	NaN	0	NaN	4724	3968	8687
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8700	27.339	NaN	4074	30	0	856.03	0.214			+	27016	LYRSSQTV	8	57	477.25645715622005	952.4983613792401	2	477.255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LYRSSQTV_	REV__nc|ENSG00000211753|A0A5B6|TRBV28	73.97473282117947	0.3737790450121076	3				NaN	NaN	0	NaN	4727	3971	8699
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8701	27.343	NaN	2750.5	30	0	570.44	0.106	+			45799	VAHLGSQL	8	45	412.7353511104112	823.4561492876225	2	412.7347717285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VAHLGSQL_	ENSG00000070444|ENST00000174618|MNT	71.87747018426188	0.391254423828572	3				NaN	NaN	0	NaN	4728	3971	8699
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8702	27.345	NaN	4754.7	30	0	2859	0.106	+			15669	GVMRVGLVAK	10	41	343.8794476412563	1028.616513523969	3	343.8793029785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GVMRVGLVAK_	ENSG00000129351|ENST00000588657|ILF3;ENST00000587928.5_1_19:10781281-10792148:+|nuORF;nc|ENSG00000129351|Q12906-2|ILF3;nc|ENSG00000129351|Q12906-3|ILF3;nc|ENSG00000129351|Q12906-4|ILF3;nc|ENSG00000129351|Q12906-5|ILF3;nc|ENSG00000129351|Q12906-6|ILF3;nc|ENSG00000129351|Q12906|ILF3	35.61828744233558	0.588957954432594	3				NaN	NaN	0	NaN	4729	3971	8699
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8703	27.346	NaN	2825.2	30	0	576.75	0.106	+			51527	YVYEGVEAK	9	62	529.264025576865	1056.51349822053	2	529.2642211914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YVYEGVEAK_	ENSG00000145384|ENST00000274024|FABP2	67.49366992349736	0.1516260258713357	3				NaN	NaN	0	NaN	4730	3971	8699
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8704	27.348	NaN	2041.1	30	0	108.37	0.106			+	36819	SIELHKEAF	9	72	537.2856210636015	1072.556689194003	2	537.28466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SIELHKEAF_	REV__ENSG00000121957|ENST00000264126|GPSM2;REV__GPSM2|p.F632Sfs*31|1|0.44|ENSG00000121957|chr1:108929776-108929776|T/-|frameshift_variant	40.77816245573522	0.41113185337114944	3				NaN	NaN	0	NaN	4731	3971	8699
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8705	27.35	NaN	2847.2	30	0	914.57	0.106			+	43811	TLPDCSHELV	10	57	557.2637173933336	1112.5128818534672	2	557.7645874023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TLPDCSHELV_	REV__ENSG00000100426|ENST00000216268|ZBED4	27.882242232435846	0.6521336255503853	3				NaN	NaN	0	NaN	4732	3971	8699
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8706	27.352	NaN	2534	30	0	232.54	0.036	+			41270	SVLKEYNLK	9	66	547.3168134181647	1092.6190739031292	2	547.3172607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVLKEYNLK_	nc|ENSG00000104973|Q71SY5-4|MED25	68.62578634547417	0.14673074753754126	3				NaN	NaN	0	NaN	4733	3971	8699
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8712	27.366	NaN	5325.9	30	0	815.68	0.214	+			38809	SSMVFTTSK	9	63	494.24475959172037	986.4749662502408	2	494.24395751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSMVFTTSK_	ENSG00000112818|ENST00000230588|MEP1A	83.6470233535746	0.08277643980271215	3				NaN	NaN	0	NaN	4736	3974	8711
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8713	27.37	NaN	4214.7	30	0	504.57	0.106	+			50696	YEEQHPEL	8	67	522.736355671874	1043.4581584105479	2	522.7354125976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YEEQHPEL_	ENSG00000008517|ENST00000525643|IL32;nc|ENSG00000008517|P24001-3|IL32;nc|ENSG00000008517|P24001-4|IL32;nc|ENSG00000008517|P24001-5|IL32;nc|ENSG00000008517|P24001-6|IL32;nc|ENSG00000008517|P24001|IL32	87.69643885390035	0.28444366722805053	3				NaN	NaN	0	NaN	4737	3974	8711
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8714	27.372	NaN	1583.3	30	0	455.42	0.106				-1	 	0	50	418.75528417409106	835.4960154149821	2	418.75506591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4738	3974	8711
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8715	27.374	NaN	3866.3	30	0	914.24	0.106			+	48107	VSTTRSPGL	9	65	459.25625374216327	916.4979545511266	2	459.25634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSTTRSPGL_	REV__ENST00000259006.7_2_17:61775212-61775701:-|nuORF	54.776311868738084	0.25715957988447635	3				NaN	NaN	0	NaN	4739	3974	8711
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8716	27.375	NaN	2194.7	30	0	890.02	0.106			+	2250	ALTPVTRQ	8	43	443.26159261698905	884.5086323007781	2	443.2608642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ALTPVTRQ_	REV__ENST00000598490.1_1_19:42806306-42813777:+|nuORF	29.14955571784316	0.7342621283720113	3				NaN	NaN	0	NaN	4740	3974	8711
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8717	27.377	NaN	1855.1	30	0	306.46	0.106			+	22320	KTFEKLKN	8	55	504.29851032633513	1006.5824677194703	2	504.29803466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KTFEKLKN_	REV__tr|U7SL56|U7SL56_FUSNUtriphosphoribosyl-dephospho-CoAsynthaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01989PE=4SV=1	45.9519527083369	0.6193794311207887	3				NaN	NaN	0	NaN	4741	3974	8711
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8718	27.379	NaN	2406.8	30	0	645.56	0.036	+			7148	DAEGLPQQQQ	10	67	557.2637173933336	1112.5128818534672	2	557.7644653320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DAEGLPQQQQ_	ENSG00000049769|ENST00000055335|PPP1R3F	56.72105179125745	0.3956618550748046	3				NaN	NaN	0	NaN	4742	3974	8711
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8724	27.395	NaN	1897	30	0	419.02	0.214			+	3107	ASGPAPGSSL	10	42	422.21426163470204	842.4139703362041	2	422.2139587402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASGPAPGSSL_	REV__nc|ENSG00000130592|P33241-3|LSP1	74.25504064058377	0.24255678544297835	3				NaN	NaN	0	NaN	4745	3977	8723
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8725	27.399	NaN	2720	30	0	239.5	0.106				-1	KGASQAGM	8	45	383.18225612538856	764.3499593175771	2	383.18170166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_KGASQAGM(Oxidation (M))_	ENSG00000117519|ENST00000370206|CNN3;ENSG00000130176|ENST00000252456|CNN1;ENSG00000144834|ENST00000478951|TAGLN3;nc|ENSG00000117519|Q15417-2|CNN3;nc|ENSG00000117519|Q15417-3|CNN3;nc|ENSG00000130176|P51911-2|CNN1	35.200714571348534	0.6875396545722289	3				NaN	NaN	0	NaN	4746	3977	8723
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8726	27.401	NaN	1737.2	30	0	560.1	0.106				-1	KQEKNMAIN	9	57	546.2809772053702	1090.5474014775402	2	546.2813110351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_KQEKNM(Oxidation (M))AIN_	CON__P02663	45.97224482568171	0.3502073465782774	3				NaN	NaN	0	NaN	4747	3977	8723
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8727	27.403	NaN	1814.4	30	0	222.5	0.106	+			2381	ANNGSPCPEL	10	57	501.2220125117976	1000.4294720903952	2	501.22125244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ANNGSPCPEL_	ENSG00000159674|ENST00000290902|SPON2	51.19269402634007	0.44601001148513897	3				NaN	NaN	0	NaN	4748	3977	8723
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8728	27.404	NaN	3990.7	30	0	456.18	0.106	+			15330	GTVIVDSTVGK	11	70	538.3038821108207	1074.5932112884414	2	538.3046264648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTVIVDSTVGK_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	85.92353377893507	0.11546253517298165	3				NaN	NaN	0	NaN	4749	3977	8723
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8729	27.406	NaN	3251.5	30	0	1748.5	0.106	+			23502	LAGLSAALLR	10	33	328.8782509166539	983.6129233501617	3	328.8784484863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LAGLSAALLR_	ENSG00000112294|ENST00000357578|ALDH5A1;nc|ENSG00000112294|P51649-2|ALDH5A1	24.20275056022122	0.6821818413321409	3				NaN	NaN	0	NaN	4750	3977	8723
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8730	27.408	NaN	1949.8	30	0	377.23	0.035			+	37286	SLAQCKKEI	9	63	510.28144569106416	1018.5483384489283	2	510.28173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SLAQCKKEI_	REV__ENSG00000163554|ENST00000643759|SPTA1;REV__nc|ENSG00000163554|P02549-2|SPTA1	47.657333605630114	0.33044192980041115	3				NaN	NaN	0	NaN	4751	3977	8723
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8736	27.424	NaN	25724	30	0	16342	0.214	+			285	AAPAYSRAL	9	63	460.2534994972061	918.4924460612123	2	460.25311279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAPAYSRAL_	ENSG00000106211|ENST00000248553|HSPB1	87.69643885390035	0.07135982304947239	3				NaN	NaN	0	NaN	4754	3980	8735
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8737	27.428	NaN	1914.8	30	0	407.05	0.106	+			17831	IFGKGAQG	8	45	389.2168284296201	776.4191039260402	2	389.21649169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IFGKGAQG_	ADAM18|p.N559Mfs*23|1|0.28|ENSG00000168619|chr8:39680077-39680077|A/-|frameshift_variant;ENSG00000168619|ENST00000265707|ADAM18;nc|ENSG00000168619|Q9Y3Q7-2|ADAM18	33.51558372728122	0.7005509609380386	3				NaN	NaN	0	NaN	4755	3980	8735
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8738	27.429	NaN	2934.2	30	0	453.08	0.106	+			23930	LDPRGRTPL	9	43	342.2004278945831	1023.5794542839492	3	342.2001647949219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LDPRGRTPL_	ANKRD13B|p.G319Afs*7|1|0.46|ENSG00000198720|chr17:29611626-29611626|G/-|frameshift_variant;ENSG00000198720|ENST00000394859|ANKRD13B;ENST00000487527.5_1_17:27916841-27940597:+|nuORF	37.81151784470057	0.4459294069877048	3				NaN	NaN	0	NaN	4756	3980	8735
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8739	27.431	NaN	4084.7	30	0	1476.4	0.106	+			21791	KQVISVSLVL	10	49	362.5692704228961	1084.6859818688883	3	362.5689392089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KQVISVSLVL_	tr|U7T2T6|U7T2T6_FUSNUMATEfamilymultidrugresistanceproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00453PE=4SV=1	29.170058357718403	0.6416167986984785	3				NaN	NaN	0	NaN	4757	3980	8735
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8740	27.433	NaN	1050.1	30	0	269.27	0.106				-1	 	0	38	322.19386621469073	642.3731794961815	2	322.1933898925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4758	3980	8735
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8741	27.435	NaN	1519.3	30	0	101.31	0.106			+	25407	LPKVVYSPR	9	59	529.8206176757812	NaN	0	529.8206176757812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LPKVVYSPR_	REV__ENSG00000047936|ENST00000368507|ROS1;REV__nc|ENSG00000047936|P08922|ROS1;REV__ROS1|p.L1167*|1|0.19|ENSG00000047936|chr6:117359957-117359957|A/-|frameshift_variant;REV__ROS1|p.L1167Ffs*26|1|0.27|ENSG00000047936|chr6:117359956-117359957|-/A|frameshift_variant;REV__ROS1|p.N1247Mfs*14|1|0.11|ENSG00000047936|chr6:117357918-117357918|T/-|frameshift_variant;REV__ROS1|p.N1821Tfs*2|1|0.44|ENSG00000047936|chr6:117326319-117326319|T/-|frameshift_variant;REV__ROS1|p.Y363Lfs*25|1|0.38|ENSG00000047936|chr6:117394238-117394239|-/A|frameshift_variant	27.882242232435846	0.3367954786602879	3				NaN	NaN	0	NaN	4759	3980	8735
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8742	27.437	NaN	928	30	0	242.51	0.036			+	-1	NKIGLHVMI	9	27	347.53436776939344	NaN	0	347.5344543457031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_NKIGLHVM(Oxidation (M))I_	REV__tr|U7T8R5|U7T8R5_FUSNUPeptidaseM20domain-containingprotein2OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00140PE=3SV=1	27.882242232435846	0.3367954786602879	3				NaN	NaN	0	NaN	4760	3980	8735
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8750	27.455	NaN	8627.6	30	0	1588.2	0.214	+			39747	STITGVMDK	9	62	476.24485243578886	950.4751519383777	2	476.2442932128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STITGVMDK_	ENSG00000147872|ENST00000276914|PLIN2;PLIN2|p.V348*|1|0.15|ENSG00000147872|chr9:19116520-19116520|C/-|frameshift_variant	91.26522074875469	0.06129826844580791	3				NaN	NaN	0	NaN	4765	3983	8749
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8751	27.458	NaN	3367.4	30	0	372.61	0.106	+			21656	KPVLSLKTSL	10	67	543.3506082553678	1084.6866635775355	2	543.350830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KPVLSLKTSL_	ENSG00000112234|ENST00000369244|FBXL4	28.5767321226876	0.6464621404813697	3				NaN	NaN	0	NaN	4766	3983	8749
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8752	27.46	NaN	2305	30	0	176.89	0.106	+			50691	YEENSHLTSV	10	73	589.7698412276566	1177.525129522113	2	590.2716674804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YEENSHLTSV_	ENSG00000157557|ENST00000360938|ETS2	66.96192283764107	0.30252237217063654	3				NaN	NaN	0	NaN	4767	3983	8749
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8753	27.462	NaN	1574.9	30	0	247.92	0.106			+	20170	KEKTWREI	8	55	545.3072067306013	1088.5998605280024	2	545.3079223632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEKTWREI_	REV__ENSG00000167525|ENST00000682792|PROCA1;REV__nc|ENSG00000167525|Q8NCQ7-2|PROCA1;REV__nc|ENSG00000167525|Q8NCQ7|PROCA1;REV__PROCA1|p.I159Sfs*14|1|0.48|ENSG00000167525|chr17:28704095-28704095|G/-|frameshift_variant	42.396135135203025	0.6414440140393314	3				NaN	NaN	0	NaN	4768	3983	8749
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8754	27.464	NaN	1716	30	0	127.6	0.035	+			46358	VEKQPPQVL	9	66	519.3034493256717	1036.5923457181434	2	519.3024291992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VEKQPPQVL_	ENSG00000166888|ENST00000300134|STAT6;nc|ENSG00000166888|P42226-2|STAT6;nc|ENSG00000166888|P42226-3|STAT6;STAT6|p.G815Efs*27|3|0.31|ENSG00000166888|chr12:57096672-57096672|C/-|frameshift_variant	56.632244143249146	0.24168844994051353	3				NaN	NaN	0	NaN	4769	3983	8749
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8759	27.478	NaN	6763.9	30	0	599.06	0.214	+			10654	EYQKVGQSF	9	76	543.2669179012565	1084.519282869313	2	543.2669067382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EYQKVGQSF_	ENSG00000178996|ENST00000381410|SNX18;nc|ENSG00000178996|Q96RF0-3|SNX18;nc|ENSG00000178996|Q96RF0|SNX18	104.0567914643314	0.03506238181059741	3				NaN	NaN	0	NaN	4771	3986	8758
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8760	27.482	NaN	3422.2	30	0	662.04	0.106	+			30586	QAPQPQSSL	9	68	478.24616976203873	954.4777865908775	2	478.2452392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QAPQPQSSL_	ENSG00000143614|ENST00000368655|GATAD2B	54.722347961057174	0.257609425301511	3				NaN	NaN	0	NaN	4772	3986	8758
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8761	27.484	NaN	2579.9	30	0	954.02	0.106			+	12115	GAFAMIKV	8	47	418.73908794848063	835.4636229637613	2	418.7384948730469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GAFAMIKV_	REV__ENSG00000134452|ENST00000362091|FBH1;REV__ENST00000460453.1_1_10:5956174-5957535:+|nuORF;REV__nc|ENSG00000134452|Q8NFZ0-2|FBH1	28.2542754592877	0.7411748056684583	3				NaN	NaN	0	NaN	4773	3986	8758
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8762	27.486	NaN	2258.1	30	0	305.52	0.106			+	23030	KVSVGSESLV	10	57	502.784410719886	1003.554268506572	2	502.77960205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KVSVGSESLV_	REV__ATP2C2|p.Y727Tfs*11|2|0.26|ENSG00000064270|chr16:84459146-84459146|T/-|frameshift_variant;REV__ENSG00000064270|ENST00000262429|ATP2C2;REV__nc|ENSG00000064270|O75185-2|ATP2C2;REV__nc|ENSG00000064270|O75185-3|ATP2C2	42.396135135203025	0.5270658956260207	3				NaN	NaN	0	NaN	4774	3986	8758
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8763	27.487	NaN	2986.9	30	0	497.15	0.106	+			4151	ATESGMLYH	9	62	504.72663568338703	1007.4387184335741	2	504.7257080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATESGMLYH_	ENSG00000108559|ENST00000573584|NUP88;ENST00000574867.5_1_17:5292093-5322970:-|nuORF	114.5858319719848	0.024477364776774663	3				NaN	NaN	0	NaN	4775	3986	8758
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8764	27.489	NaN	2334.3	30	0	314.87	0.106			+	20836	KIIEEKTL	8	58	487.3006391378892	972.5867253425785	2	487.29986572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KIIEEKTL_	REV__COL28A1|p.N938Mfs*12|1|0.15|ENSG00000215018|chr7:7373093-7373093|T/-|frameshift_variant;REV__COL28A1|p.V898Wfs*18|1|0.41|ENSG00000215018|chr7:7373215-7373215|T/-|frameshift_variant;REV__ENSG00000215018|ENST00000399429|COL28A1	56.72105179125745	0.5342425954139568	3				NaN	NaN	0	NaN	4776	3986	8758
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8765	27.491	NaN	1628.5	30	0	280.27	0.035			+	31589	QLSHEEQL	8	59	492.24364065717316	982.4727283811463	2	492.2428283691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QLSHEEQL_	REV__ENSG00000087502|ENST00000360150|ERGIC2	37.15910966729921	0.6739408393984688	3				NaN	NaN	0	NaN	4777	3986	8758
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8769	27.505	NaN	5343.1	30	0	3285.9	0.214	+			1795	AIFKPVMSK	9	36	340.8685616634108	1019.5838555904324	3	340.8685302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AIFKPVMSK_	ENSG00000116478|ENST00000373548|HDAC1	22.579656572578934	0.5922287541734749	3				NaN	NaN	0	NaN	4778	3989	8768
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8770	27.509	NaN	3534.8	30	0	439.39	0.106	+			20237	KELTIGSKL	9	64	494.80598087347016	987.5974088137403	2	494.80560302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KELTIGSKL_	ENSG00000197956|ENST00000368719|S100A6	128.60217544463768	0.015992218256422188	3				NaN	NaN	0	NaN	4779	3989	8768
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8771	27.511	NaN	2264.8	30	0	475.25	0.106				-1	 	0	47	399.19551482152224	796.3764767098445	2	399.195068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4780	3989	8768
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8772	27.512	NaN	1363.6	30	0	249.74	0.106	+			48556	VTPEVKKT	8	49	451.27073584254043	NaN	0	451.2703857421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTPEVKKT_	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42|TTN;TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;TTN|p.D20259Rfs*40|1|0.44|ENSG00000155657|chr2:178583105-178583106|-/T|frameshift_variant;TTN|p.D21555Ifs*6|1|0.33|ENSG00000155657|chr2:178576659-178576659|G/-|frameshift_variant;TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;TTN|p.E20392Dfs*6|1|0.04|ENSG00000155657|chr2:178582357-178582358|-/TTTAAAATTA|frameshift_variant;TTN|p.E20392Kfs*4|1|0.02|ENSG00000155657|chr2:178582359-178582360|-/TTTT|frameshift_variant;TTN|p.G19920Afs*12|1|0.42|ENSG00000155657|chr2:178584961-178584961|G/-|frameshift_variant;TTN|p.G22029Efs*22|2|0.13|ENSG00000155657|chr2:178575125-178575125|T/-|frameshift_variant;TTN|p.I24998Nfs*2|1|0.35|ENSG00000155657|chr2:178566216-178566217|-/T|frameshift_variant;TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;TTN|p.K26626Nfs*34|1|0.34|ENSG00000155657|chr2:178561331-178561331|T/-|frameshift_variant;TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant;TTN|p.P22810Hfs*10|1|0.03|ENSG00000155657|chr2:178572780-178572781|-/AAAT|frameshift_variant;TTN|p.V22573Cfs*4|2|0.31|ENSG00000155657|chr2:178573492-178573492|C/-|frameshift_variant;TTN|p.V27442Cfs*4|1|0.05|ENSG00000155657|chr2:178558107-178558108|-/A|frameshift_variant	52.936696900407355	1.7418937515398478	3				NaN	NaN	0	NaN	4781	3989	8768
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8773	27.514	NaN	1980.8	30	0	131.75	0.106	+			978	AEKEFNETM	9	68	549.742610953172	1097.4706689731438	2	549.7431030273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEKEFNETM_	ENSG00000066135|ENST00000372396|KDM4A;KDM4A|p.K699Sfs*7|1|0.06|ENSG00000066135|chr1:43690902-43690902|A/-|frameshift_variant;nc|ENSG00000066135|O75164-2|KDM4A	76.16968421966216	0.11411088698345859	3				NaN	NaN	0	NaN	4782	3989	8768
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8774	27.516	NaN	2972.6	30	0	371.37	0.106	+			46898	VIQTHTHT	8	54	468.7487030186745	935.4828531041491	2	468.7485656738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VIQTHTHT_	ENST00000416928.6_1_2:177041157-177041208:-|nuORF	40.5726180659479	0.6527593143185008	3				NaN	NaN	0	NaN	4783	3989	8768
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8775	27.518	NaN	1765.9	30	0	181.47	0.033			+	48711	VTTQTKPL	8	54	444.2633329096723	886.5121128861446	2	444.2630615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VTTQTKPL_	REV__CFHR3|p.A123T|1|0.36|ENSG00000116785|chr1:196779910-196779910|G/A|missense_variant	58.78195531508484	0.5138399468736706	3				NaN	NaN	0	NaN	4784	3989	8768
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8784	27.537	NaN	2314.3	30	0	402.89	0.214	+			4482	ATITDKELLK	10	68	566.3350078531638	1130.6554627731275	2	566.3352661132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATITDKELLK_	ENSG00000131503|ENST00000360839|ANKHD1;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	85.92353377893507	0.15441247375292388	3				NaN	NaN	0	NaN	4790	3992	8783
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8785	27.541	NaN	2908	30	0	1381.8	0.106			+	23651	LARPNIQLE	9	58	527.3063740562985	1052.598195179397	2	527.306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LARPNIQLE_	REV__ENSG00000091157|ENST00000254442|WDR7;REV__nc|ENSG00000091157|Q9Y4E6-2|WDR7;REV__WDR7|p.K551Nfs*3|1|0.2|ENSG00000091157|chr18:56718033-56718033|A/-|frameshift_variant;REV__WDR7|p.L1146Hfs*7|1|0.04|ENSG00000091157|chr18:56880075-56880076|-/ATAGAATCTCAACT|frameshift_variant;REV__WDR7|p.S493Qfs*3|1|0.08|ENSG00000091157|chr18:56696357-56696357|T/-|frameshift_variant	16.473147378115264	0.6112419832031293	3				NaN	NaN	0	NaN	4791	3992	8783
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8786	27.543	NaN	2349.6	30	0	240.97	0.106			+	37760	SLVLLVSN	8	55	422.7608768042982	843.5072006753965	2	422.7605285644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLVLLVSN_	REV__DNTTIP2|p.N616Tfs*33|1|0.13|ENSG00000067334|chr1:93873174-93873174|T/-|frameshift_variant;REV__DNTTIP2|p.N659Mfs*6|1|0.42|ENSG00000067334|chr1:93872163-93872163|T/-|frameshift_variant;REV__DNTTIP2|p.R633Tfs*24|1|0.25|ENSG00000067334|chr1:93873124-93873125|-/T|frameshift_variant;REV__ENSG00000067334|ENST00000436063|DNTTIP2	44.116797842482775	0.6307669463330267	3				NaN	NaN	0	NaN	4792	3992	8783
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8787	27.545	NaN	2070.1	30	0	575.4	0.106			+	-1	MSRMVSFK	8	56	509.24748475635465	1016.4804165795093	2	509.2465515136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Oxidation (M)	_M(Oxidation (M))SRM(Oxidation (M))VSFK_	REV__ENSG00000073111|ENST00000265056|MCM2;REV__ENST00000468414.1_1_3:127336783-127340613:+|nuORF;REV__ENST00000474964.5_1_3:127323572-127340613:+|nuORF	44.116797842482775	0.6307669463330267	3				NaN	NaN	0	NaN	4793	3992	8783
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8788	27.547	NaN	1622.9	30	0	416.13	0.106			+	3191	ASKKIEGKF	9	38	336.53422680595446	1006.5808510180634	3	336.5344543457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASKKIEGKF_	REV__tr|U7SUA5|U7SUA5_FUSNUOligopeptidaseFOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01160PE=3SV=1	21.9598887501803	0.5980208138527809	3				NaN	NaN	0	NaN	4794	3992	8783
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8789	27.548	NaN	1637.6	30	0	98.62	0.106			+	29413	PAVSSLTAIA	10	59	465.2685734517597	NaN	0	465.2687683105469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PAVSSLTAIA_	REV__CFAP69|p.K687Nfs*43|3|0.26|ENSG00000105792|chr7:90303973-90303973|A/-|frameshift_variant;REV__ENSG00000105792|ENST00000389297|CFAP69;REV__ENST00000451029.5_1_7:89905415-89916830:+|nuORF;REV__ENST00000475031.5_1_7:89901258-89916830:+|nuORF;REV__nc|ENSG00000105792|A5D8W1-2|CFAP69;REV__nc|ENSG00000105792|A5D8W1-5|CFAP69	37.15910966729921	0.3781637092648983	3				NaN	NaN	0	NaN	4795	3992	8783
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8790	27.55	NaN	1390.4	30	0	113.95	0.037			+	-1	FGTRCSCKY	9	52	589.7601852424908	1177.5058175517815	2	589.7617797851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C)	_FGTRC(Carbamidomethyl (C))SC(Carbamidomethyl (C))KY_	REV__ENSG00000167992|ENST00000335613|VWCE;REV__nc|ENSG00000167992|Q96DN2-2|VWCE;REV__VWCE|p.G829Efs*100|1|0.11|ENSG00000167992|chr11:61259057-61259058|-/ACCT|frameshift_variant	31.529811441608018	0.5085848003137583	3				NaN	NaN	0	NaN	4796	3992	8783
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8797	27.567	NaN	5112.3	30	0	1285.1	0.214	+			48922	VVDQTTLMK	9	66	517.7811448210717	1033.5477367089434	2	517.7811889648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVDQTTLMK_	ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;TRRAP-ASNS|1|fusion;TRRAP-ASNS|2|fusion;TRRAP|p.A1620Cfs*35|1|0.27|ENSG00000196367|chr7:98949499-98949500|-/G|frameshift_variant;TRRAP|p.I564Hfs*9|1|0.29|ENSG00000196367|chr7:98910389-98910390|-/G|frameshift_variant;TRRAP|p.K3443Sfs*19|1|0.28|ENSG00000196367|chr7:99004246-99004246|A/-|frameshift_variant;TRRAP|p.L291*|1|0.36|ENSG00000196367|chr7:98900691-98900691|T/-|frameshift_variant;TRRAP|p.P1292Lfs*17|1|0.44|ENSG00000196367|chr7:98933258-98933258|C/-|frameshift_variant;TRRAP|p.P1360Afs*14|1|0.05|ENSG00000196367|chr7:98935641-98935642|-/GCAAATAA|frameshift_variant	91.26522074875469	0.06129826844580791	3				NaN	NaN	0	NaN	4800	3995	8796
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8798	27.57	NaN	1566.1	30	0	419.92	0.106				-1	 	0	36	329.2199237128831	656.4252944925662	2	329.2196960449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4801	3995	8796
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8799	27.572	NaN	1981.8	30	0	261.68	0.106	+			19876	KEEPPQPQL	9	61	533.2830142631799	1064.5514755931597	2	533.2825317382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEEPPQPQL_	ENSG00000101084|ENST00000344795|RAB5IF;ENST00000491113.1_1_20:35234354-35236222:+|nuORF;nc|ENSG00000101084|Q9BUV8-3|RAB5IF;nc|ENSG00000101084|Q9BUV8-4|RAB5IF;nc|ENSG00000101084|Q9BUV8-5|RAB5IF;nc|ENSG00000101084|Q9BUV8|RAB5IF	51.19269402634007	0.2889735674168909	3				NaN	NaN	0	NaN	4802	3995	8796
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8800	27.574	NaN	1706.8	30	0	167.97	0.106	+			2407	APAPIHNQF	9	59	497.7592111167898	993.5038693003796	2	497.7586364746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_APAPIHNQF_	ENSG00000051108|ENST00000439977|HERPUD1;ENST00000570273.5_1_16:56966069-56976120:+|nuORF;HERPUD1|p.S286Pfs*2|1|0.44|ENSG00000051108|chr16:56940194-56940194|C/-|frameshift_variant;nc|ENSG00000051108|Q15011-2|HERPUD1;nc|ENSG00000051108|Q15011-4|HERPUD1	47.91560031466742	0.327412564698279	3				NaN	NaN	0	NaN	4803	3995	8796
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8801	27.576	NaN	1669	30	0	175.8	0.106			+	47098	VLLDLLPNA	9	53	484.2935485839844	NaN	0	484.2935485839844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VLLDLLPNA_	REV__ENSG00000176225|ENST00000640769|RTTN;REV__ENST00000583043.5_1_18:67684852-67806940:-|nuORF;REV__nc|ENSG00000176225|Q86VV8-3|RTTN;REV__RTTN|p.Y1487Mfs*4|1|0.38|ENSG00000176225|chr18:70075457-70075457|A/-|frameshift_variant	29.14955571784316	0.3303970763161698	3				NaN	NaN	0	NaN	4804	3995	8796
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8802	27.578	NaN	1827.8	30	0	201.19	0.106	+			24261	LEVGDNHL	8	44	448.7276796020416	895.4408062708832	2	448.7271728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LEVGDNHL_	ENSG00000213171|ENST00000368820|LINGO4;LINGO4|p.L527Sfs*3|1|0.23|ENSG00000213171|chr1:151801126-151801127|-/A|frameshift_variant;LINGO4|p.L527Wfs*21|1|0.34|ENSG00000213171|chr1:151801127-151801127|A/-|frameshift_variant	31.954861631926434	0.7126016770032289	3				NaN	NaN	0	NaN	4805	3995	8796
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8803	27.579	NaN	1590.1	30	0	396.21	0.037	+			43875	TMKHFKKPT	9	36	373.20955430949846	NaN	0	373.2096862792969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TMKHFKKPT_	DGKG|p.M663Ifs*17|1|0.04|ENSG00000058866|chr3:186188308-186188308|C/-|frameshift_variant;ENSG00000058866|ENST00000265022|DGKG;ENST00000480809.5_1_3:185925300-186038248:-|nuORF;nc|ENSG00000058866|P49619-2|DGKG;nc|ENSG00000058866|P49619-3|DGKG	20.030474535948922	0.36918787600646324	3				NaN	NaN	0	NaN	4806	3995	8796
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8810	27.596	NaN	3419.6	30	0	379.62	0.214			+	12437	GEASVCALAK	10	68	474.74269165915103	NaN	0	474.7425231933594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEASVCALAK_	REV__ENSG00000148840|ENST00000278070|PPRC1;REV__nc|ENSG00000148840|Q5VV67-2|PPRC1	62.107414245175825	0.217068727747531	3				NaN	NaN	0	NaN	4810	3998	8809
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8811	27.599	NaN	3205.6	30	0	453.84	0.106	+			45854	VALLNKTNV	9	66	486.2983030069031	970.5820530806062	2	486.29779052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VALLNKTNV_	CTNNB1|p.K292T|1|0.34|ENSG00000168036|chr3:41225800-41225800|A/C|missense_variant;CTNNB1|p.L301Hfs*16|1|0.05|ENSG00000168036|chr3:41225827-41225831|TTCAA/-|frameshift_variant;ENSG00000168036|ENST00000349496|CTNNB1	37.81151784470057	0.4459294069877048	3				NaN	NaN	0	NaN	4811	3998	8809
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8812	27.601	NaN	3088.5	30	0	288.09	0.106	+			24315	LFHPSNVEM	9	66	545.2551170204364	1088.4956811076727	2	545.255615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_LFHPSNVEM(Oxidation (M))_	ENSG00000151694|ENST00000310823|ADAM17	62.107414245175825	0.1960472003779324	3				NaN	NaN	0	NaN	4812	3998	8809
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8813	27.603	NaN	5525.3	30	0	787.95	0.106	+			6192	AVQQPFINK	9	73	522.7955571033374	1043.5765612734747	2	522.7958374023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVQQPFINK_	ENSG00000186260|ENST00000571589|MRTFB;nc|ENSG00000186260|Q9ULH7-4|MRTFB;nc|ENSG00000186260|Q9ULH7|MRTFB	66.42927471994793	0.16001998865088202	3				NaN	NaN	0	NaN	4813	3998	8809
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8814	27.605	NaN	3049.6	30	0	476.07	0.106			+	46690	VGISTHLPL	9	59	468.779566538305	935.54458014341	2	468.7792053222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VGISTHLPL_	REV__nc|ENSG00000159322|Q9BRR6-5|ADPGK	45.9519527083369	0.35044536499095585	3				NaN	NaN	0	NaN	4814	3998	8809
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8815	27.607	NaN	1918.6	30	0	198.06	0.106	+			38325	SRGGPVSRSP	10	53	500.26810813588725	NaN	0	500.2680969238281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SRGGPVSRSP_	ENST00000598375.5_1_19:18699853-18700318:+|nuORF	32.75053402867276	0.3926392905881664	3				NaN	NaN	0	NaN	4815	3998	8809
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8816	27.609	NaN	1559.1	30	0	234.85	0.033	+			1201	AEQATRIV	8	51	444.25079308632064	886.4870332394413	2	444.2507629394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AEQATRIV_	ENSG00000116151|ENST00000378531|MORN1;ENST00000419785.1_1_1:2303243-2316539:-|nuORF;ENST00000469374.5_1_1:2303893-2316539:-|nuORF;ENST00000606372.5_1_1:2263981-2323005:-|nuORF;MORN1|p.E226Gfs*45|1|0.04|ENSG00000116151|chr1:2372548-2372549|TT/-|frameshift_variant;nc|ENSG00000116151|Q5T089-2|MORN1	34.172542307311794	0.6954784234644539	3				NaN	NaN	0	NaN	4816	3998	8809
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8823	27.625	NaN	14323	30	0	5789.7	0.214	+			15241	GTTAVFINK	9	60	475.76930810919697	949.524063285194	2	475.7685852050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTTAVFINK_	ASH1L|p.H1793Ifs*7|1|0.13|ENSG00000116539|chr1:155438778-155438778|G/-|frameshift_variant;ASH1L|p.I970Lfs*9|1|0.2|ENSG00000116539|chr1:155479962-155479962|T/-|frameshift_variant;ASH1L|p.K1222Rfs*11|4|0.27|ENSG00000116539|chr1:155479205-155479205|T/-|frameshift_variant;ASH1L|p.K1533Sfs*17|1|0.25|ENSG00000116539|chr1:155478272-155478272|T/-|frameshift_variant;ASH1L|p.K2377Nfs*5|1|0.28|ENSG00000116539|chr1:155354570-155354570|T/-|frameshift_variant;ASH1L|p.N1822Tfs*2|1|0.33|ENSG00000116539|chr1:155438690-155438690|T/-|frameshift_variant;ASH1L|p.R712Efs*23|3|0.35|ENSG00000116539|chr1:155480736-155480736|T/-|frameshift_variant;ASH1L|p.S2309Ifs*11|1|0.64|ENSG00000116539|chr1:155357635-155357636|-/T|frameshift_variant;ENSG00000116539|ENST00000392403|ASH1L;nc|ENSG00000116539|Q9NR48|ASH1L	139.97047562133406	0.010493916756945389	3				NaN	NaN	0	NaN	4820	4001	8822
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8824	27.628	NaN	11483	30	0	1747.4	0.106				-1	 	0	55	440.6957435543387	879.3769341754775	2	440.6953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4821	4001	8822
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8825	27.63	NaN	4841.7	30	0	3080.5	0.106	+			2100	ALFRDKLK	8	33	330.87487372491876	989.6027917749564	3	330.87469482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ALFRDKLK_	CUEDC1|p.F320Nfs*12|1|0.3|ENSG00000180891|chr17:57868223-57868226|CAAA/-|frameshift_variant;ENSG00000180891|ENST00000577830|CUEDC1;ENST00000584746.5_1_17:55944697-55948725:-|nuORF;nc|ENSG00000180891|Q9NWM3-2|CUEDC1	28.2542754592877	0.7411748056684583	3				NaN	NaN	0	NaN	4822	4001	8822
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8826	27.632	NaN	2419	30	0	200.83	0.106				-1	EQCVAKIQY	9	65	569.7803925324185	1137.546232131637	2	569.7805786132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_EQC(Carbamidomethyl (C))VAKIQY_	CCDC110|p.I511Nfs*3|1|0.22|ENSG00000168491|chr4:185459055-185459056|-/T|frameshift_variant;CCDC110|p.M707Nfs*9|1|0.48|ENSG00000168491|chr4:185458467-185458468|-/T|frameshift_variant;CCDC110|p.N755Mfs*18|1|0.24|ENSG00000168491|chr4:185458323-185458323|T/-|frameshift_variant;CCDC110|p.T592Hfs*5|1|0.4|ENSG00000168491|chr4:185458813-185458813|T/-|frameshift_variant;CCDC110|p.V445*|1|0.29|ENSG00000168491|chr4:185459255-185459255|T/-|frameshift_variant;ENSG00000168491|ENST00000307588|CCDC110;nc|ENSG00000168491|Q8TBZ0-2|CCDC110	42.396135135203025	0.392153681582562	3				NaN	NaN	0	NaN	4823	4001	8822
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8827	27.634	NaN	2278.8	30	0	230.33	0.106	+			77	AAAYPHTSL	9	65	465.7376278057964	929.4607026783929	2	465.73712158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AAAYPHTSL_	ENSG00000142599|ENST00000400908|RERE;nc|ENSG00000142599|Q9P2R6-2|RERE;RERE|p.Q899L|1|0.36|ENSG00000142599|chr1:8360811-8360811|T/A|missense_variant;RERE|p.S1084Rfs*173|1|0.21|ENSG00000142599|chr1:8360258-8360258|C/-|frameshift_variant;RERE|p.T1358Dfs*37|1|0.36|ENSG00000142599|chr1:8358464-8358465|-/G|frameshift_variant	47.91560031466742	0.327412564698279	3				NaN	NaN	0	NaN	4824	4001	8822
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8828	27.636	NaN	2772.8	30	0	267.11	0.106	+			45522	TYHPPGQTF	9	66	524.2484025552328	1046.4822521772655	2	524.2488403320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TYHPPGQTF_	FCGBP-ACSS2|1|fusion;nc|ENSG00000275395|Q9Y6R7|FCGBP	31.529811441608018	0.5085848003137583	3				NaN	NaN	0	NaN	4825	4001	8822
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8829	27.638	NaN	1505.8	30	0	181.42	0.038	+			50080	WGEIPKIERA	10	56	599.830861943302	1197.647170953404	2	599.8306274414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_WGEIPKIERA_	ENSG00000070018|ENST00000261349|LRP6;LRP6|p.F536Rfs*10|1|0.06|ENSG00000070018|chr12:12165235-12165236|-/GCTTTCT|frameshift_variant	45.908116695636124	0.4947047446361497	3				NaN	NaN	0	NaN	4826	4001	8822
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8838	27.657	NaN	6062.7	30	0	2495.9	0.214	+			10554	EYATKISRF	9	67	557.7985622412048	1113.5825715492094	2	557.798583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EYATKISRF_	ENSG00000057757|ENST00000246151|PITHD1;nc|ENSG00000057757|Q9GZP4-2|PITHD1	76.16968421966216	0.11411088698345859	3				NaN	NaN	0	NaN	4832	4004	8837
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8839	27.661	NaN	4755.5	30	0	732.44	0.106	+			46521	VEWNKKEEL	9	72	587.8090765044303	1173.6036000756606	2	587.8089599609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VEWNKKEEL_	BZW1|p.S325Rfs*19|1|0.04|ENSG00000082153|chr2:200819989-200819990|-/ACAATATAGAA|frameshift_variant;ENSG00000082153|ENST00000409600|BZW1;ENSG00000136261|ENST00000258761|BZW2;nc|ENSG00000082153|Q7L1Q6-3|BZW1;nc|ENSG00000082153|Q7L1Q6-4|BZW1	109.47833844074708	0.029530294723441826	3				NaN	NaN	0	NaN	4833	4004	8837
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8840	27.663	NaN	3212.9	30	0	270.24	0.106			+	28214	NAVFGRSADL	10	69	525.2725788266312	1048.5306047200622	2	525.272705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NAVFGRSADL_	REV__ENST00000413432.2_1_2:242383334-242383583:+|nuORF	64.20726635412375	0.3275756395432415	3				NaN	NaN	0	NaN	4834	4004	8837
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8841	27.665	NaN	6420.1	30	0	1663.4	0.106			+	23879	LDGPFERLDI	10	54	392.2087961364804	1173.6045590096412	3	392.2082824707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LDGPFERLDI_	REV__ENSG00000174348|ENST00000312553|PODN;REV__nc|ENSG00000174348|Q7Z5L7-2|PODN;REV__nc|ENSG00000174348|Q7Z5L7-3|PODN;REV__nc|ENSG00000174348|Q7Z5L7-4|PODN;REV__PODN|p.I380Sfs*55|1|0.26|ENSG00000174348|chr1:53078499-53078499|C/-|frameshift_variant;REV__PODN|p.P303Rfs*7|3|0.25|ENSG00000174348|chr1:53077705-53077705|C/-|frameshift_variant;REV__PODN|p.R543Vfs*77|1|0.42|ENSG00000174348|chr1:53078989-53078989|C/-|frameshift_variant	27.882242232435846	0.6521336255503853	3				NaN	NaN	0	NaN	4835	4004	8837
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8842	27.667	NaN	2557.9	30	0	183.03	0.106			+	11819	FSVDLGSLRL	10	64	553.8142846308248	1105.6140163284495	2	553.8141479492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FSVDLGSLRL_	REV__ENSG00000171823|ENST00000339235|FBXL14	51.19269402634007	0.44601001148513897	3				NaN	NaN	0	NaN	4836	4004	8837
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8843	27.668	NaN	2710.5	30	0	353.36	0.035	+			19903	KEFDGKSLV	9	66	511.77970813932393	1021.5448633454479	2	511.7793884277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KEFDGKSLV_	ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;ENST00000517330.1_1_5:77337712-77337985:-|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P;nc|ENSG00000205940|Q58FF8|HSP90AB2P	52.936696900407355	0.27249468807391813	3				NaN	NaN	0	NaN	4837	4004	8837
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8844	27.669	NaN	3565.2	30	0	338.45	0.14	+			28384	NELKGQQVL	9	71	514.791548635586	1027.5685443379718	2	514.790771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NELKGQQVL_	chr6:135201749-135202414|375|10.11|0.42|4.6|+|ENST00000616088|MYB,MYB;ENSG00000118513|ENST00000341911|MYB;nc|ENSG00000118513|P10242-10|MYB;nc|ENSG00000118513|P10242-11|MYB;nc|ENSG00000118513|P10242-12|MYB;nc|ENSG00000118513|P10242-3|MYB;nc|ENSG00000118513|P10242-5|MYB;nc|ENSG00000118513|P10242-6|MYB;nc|ENSG00000118513|P10242-8|MYB;nc|ENSG00000118513|P10242|MYB	62.107414245175825	0.1960472003779324	3				NaN	NaN	0	NaN	4838	4004	8837
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8851	27.687	NaN	22531	30	0	16957	0.214				-1	 	0	48	343.19918885250013	684.3838247718003	2	343.1988830566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4842	4007	8850
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8852	27.691	NaN	7230.6	30	0	1945	0.106	+			16544	HEVMEQQTL	9	63	557.7638813829554	1113.5132098327108	2	557.7640380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HEVMEQQTL_	ENSG00000104738|ENST00000649973|MCM4;MCM4|p.T629Qfs*18|2|0.31|ENSG00000104738|chr8:47971419-47971419|A/-|frameshift_variant	43.650786325866115	0.37743712540499297	3				NaN	NaN	0	NaN	4843	4007	8850
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8853	27.693	NaN	3265.7	30	0	514.84	0.106	+			47093	VLKVLSSLK	9	65	493.8347094917745	985.654866050349	2	493.83380126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VLKVLSSLK_	DIDO1|p.G1745Afs*119|1|0.26|ENSG00000101191|chr20:62880722-62880722|C/-|frameshift_variant;DIDO1|p.P1738Hfs*126|1|0.39|ENSG00000101191|chr20:62880743-62880743|G/-|frameshift_variant;DIDO1|p.S1285Afs*76|1|0.39|ENSG00000101191|chr20:62882104-62882104|G/-|frameshift_variant;ENSG00000101191|ENST00000395343|DIDO1	56.72105179125745	0.24094814563026265	3				NaN	NaN	0	NaN	4844	4007	8850
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8854	27.694	NaN	8429.4	30	0	3012.1	0.106			+	18893	IVKVSITKV	9	65	329.55870002732536	985.654270682176	3	329.5584716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IVKVSITKV_	REV__ENSG00000183023|ENST00000332839|SLC8A1;REV__nc|ENSG00000183023|P32418-5|SLC8A1	15.641811463095205	0.6112419832031292	3				NaN	NaN	0	NaN	4845	4007	8850
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8855	27.696	NaN	3596.5	30	0	440.53	0.106	+			21451	KNFHTSPAE	9	67	515.7519396510082	NaN	0	515.7518920898438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KNFHTSPAE_	ENST00000534964.6_1_15:52970223-52970710:-|nuORF	66.42927471994793	0.121898005645852	3				NaN	NaN	0	NaN	4846	4007	8850
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8856	27.698	NaN	2604.1	30	0	313.18	0.106	+			42322	TAGAVTQCY	9	63	485.71813744717866	NaN	0	485.71856689453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_TAGAVTQC(Carbamidomethyl (C))Y_	ENSG00000105640|ENST00000222247|RPL18A	74.25504064058377	0.09106938647426577	3				NaN	NaN	0	NaN	4847	4007	8850
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8857	27.7	NaN	1989.1	30	0	162.56	0.034	+			30383	PVPPEQRP	8	52	460.2534994972061	918.4924460612123	2	461.2555236816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PVPPEQRP_	ENSG00000167522|ENST00000301030|ANKRD11;ENST00000330736.9_1_16:89334888-89371640:-|nuORF	20.481830146152948	0.8005983782650069	3				NaN	NaN	0	NaN	4848	4007	8850
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8865	27.718	NaN	7404.5	30	0	1791.3	0.215	+			16845	HPEKLATVL	9	73	504.29783590218767	NaN	0	504.2979736328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HPEKLATVL_	ENSG00000164934|ENST00000612750|DCAF13;ENST00000521716.1_1_8:104427674-104432721:+|nuORF;nc|ENSG00000164934|Q9NV06-2|DCAF13	47.657333605630114	0.2228375344433429	3				NaN	NaN	0	NaN	4853	4010	8864
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8866	27.722	NaN	5540.1	30	0	435.57	0.106	+			14605	GTGASGSFKLN	11	64	519.7648500345296	1037.515147135859	2	519.76513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTGASGSFKLN_	ENSG00000124575|ENST00000244534|H1-3;ENSG00000124610|ENST00000244573|H1-1;ENSG00000168298|ENST00000304218|H1-4;ENSG00000184357|ENST00000331442|H1-5;ENSG00000187837|ENST00000343677|H1-2	70.39856735676683	0.2324169829117963	3				NaN	NaN	0	NaN	4854	4010	8864
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8867	27.723	NaN	2547.7	30	0	364.58	0.106	+			48196	VTAKELSLVNK	11	76	601.3617450882441	1200.7089372432881	2	601.3613891601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTAKELSLVNK_	ENSG00000050405|ENST00000341247|LIMA1;LIMA1|p.T536Lfs*38|2|0.4|ENSG00000050405|chr12:50177739-50177739|G/-|frameshift_variant;nc|ENSG00000050405|Q9UHB6-4|LIMA1	108.68477336456304	0.04273257661091486	3				NaN	NaN	0	NaN	4855	4010	8864
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8868	27.725	NaN	3319.8	30	0	538.31	0.106	+			38088	SPTNTVHMY	9	72	525.2396123092045	1048.464671685209	2	525.2394409179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SPTNTVHMY_	ENSG00000138592|ENST00000307179|USP8;nc|ENSG00000138592|P40818-2|USP8;USP8|p.K997Rfs*2|1|0.11|ENSG00000138592|chr15:50497178-50497178|A/-|frameshift_variant	88.17693792209575	0.07000514020414955	3				NaN	NaN	0	NaN	4856	4010	8864
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8869	27.727	NaN	3553.7	30	0	567.49	0.106	+			29310	NYNNQSSNF	9	66	544.2258407585508	1086.4371285839015	2	544.2266845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NYNNQSSNF_	chr12:54282662-54282800|482|460.96|0.0|25.46|+|ENST00000677249|HNRNPA1,HNRNPA1;ENSG00000135486|ENST00000340913|HNRNPA1;ENSG00000139675|ENST00000357495|HNRNPA1L2;ENSG00000224578|ENST00000565308|HNRNPA1L3;ENST00000411857.2_1_1:179425361-179425934:-|nuORF;ENST00000432375.1_1_6:32293532-32293889:+|nuORF;ENST00000444886.1_1_9:128358610-128358904:+|nuORF;nc|ENSG00000135486|P09651-2|HNRNPA1;nc|ENSG00000135486|P09651-3|HNRNPA1	95.81516180277367	0.04847050768394289	3				NaN	NaN	0	NaN	4857	4010	8864
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8870	27.729	NaN	2609.3	30	0	400.29	0.106			+	19370	KALHSSRYF	9	70	554.7988080795635	1107.583063225927	2	555.3019409179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KALHSSRYF_	REV__ENSG00000272602|ENST00000610261|ZNF595;REV__ENST00000380882.5_4:85656-87337:+|nuORF	58.78195531508484	0.22376836668196862	3				NaN	NaN	0	NaN	4858	4010	8864
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8871	27.731	NaN	2715.8	30	0	1475.9	0.036			+	43782	TLKGLFRKI	9	43	359.2380110000282	1074.6922036002848	3	359.5718078613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TLKGLFRKI_	REV__ENSG00000138411|ENST00000644978|HECW2;REV__ENST00000409111.2_1_2:197184567-197194349:-|nuORF;REV__HECW2|p.G1392Vfs*19|1|0.22|ENSG00000138411|chr2:196220913-196220913|C/-|frameshift_variant;REV__HECW2|p.R1017Gfs*19|1|0.33|ENSG00000138411|chr2:196278614-196278614|G/-|frameshift_variant;REV__HECW2|p.V922*|1|0.28|ENSG00000138411|chr2:196306539-196306539|G/-|frameshift_variant	25.57405402267927	0.5642445186134241	3				NaN	NaN	0	NaN	4859	4010	8864
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8877	27.745	NaN	4474.7	30	0	1060.3	0.214			+	36708	SGSNPLLKT	9	51	458.7587176791535	915.502882425107	2	458.75830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SGSNPLLKT_	REV__ENST00000483926.5_1_1:27668800-27676624:+|nuORF	47.95952297671804	0.32689736945648856	3				NaN	NaN	0	NaN	4862	4013	8876
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8878	27.749	NaN	2714.6	30	0	1333	0.106			+	2707	AQRLRLGPF	9	59	529.3176695294884	1056.6207861257767	2	529.317138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AQRLRLGPF_	REV__ENST00000228918.8_1_12:6493242-6493407:+|nuORF	50.0245360154114	0.3026755932229825	3				NaN	NaN	0	NaN	4863	4013	8876
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8879	27.751	NaN	2716.2	30	0	316.82	0.106	+			4760	ATNAACASLLK	11	70	560.2955031370573	1118.5764533409144	2	560.2957763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_ATNAAC(Carbamidomethyl (C))ASLLK_	ENSG00000134996|ENST00000346234|OSTF1;OSTF1|p.K191Rfs*11|1|0.32|ENSG00000134996|chr9:75140914-75140914|A/-|frameshift_variant	75.56570413236392	0.18934020192193834	3				NaN	NaN	0	NaN	4864	4013	8876
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8880	27.752	NaN	2062.6	30	0	137	0.106	+			35250	SALHIAIEK	9	59	491.2914772816745	980.568401630149	2	491.289306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SALHIAIEK_	ENSG00000187688|ENST00000338560|TRPV2;TRPV2|p.I444Sfs*23|3|0.39|ENSG00000187688|chr17:16427521-16427521|G/-|frameshift_variant	61.691277971877994	0.19951612995419254	3				NaN	NaN	0	NaN	4865	4013	8876
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8881	27.754	NaN	2123.4	30	0	205.75	0.106			+	-1	GCTHHQCEC	9	61	537.6813994074106	1073.348245881621	2	537.6805419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_GC(Carbamidomethyl (C))THHQCEC_	REV__ENSG00000053747|ENST00000313654|LAMA3;REV__LAMA3|p.E2016Rfs*13|1|0.27|ENSG00000053747|chr18:23901164-23901164|G/-|frameshift_variant;REV__LAMA3|p.P420Lfs*49|1|0.38|ENSG00000053747|chr18:23773570-23773570|C/-|frameshift_variant;REV__LAMA3|p.T2580Hfs*68|1|0.55|ENSG00000053747|chr18:23915376-23915376|A/-|frameshift_variant;REV__nc|ENSG00000053747|Q16787-3|LAMA3	18.324413293986947	0.6112419832031293	3				NaN	NaN	0	NaN	4866	4013	8876
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8882	27.756	NaN	1592.3	30	0	292.48	0.106	+			46625	VGADGGGTLP	10	45	422.2138226550954	NaN	0	422.2139587402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VGADGGGTLP_	ENST00000452079.5_2_1:3663703-3663874:-|nuORF	37.15910966729921	0.3781637092648983	3				NaN	NaN	0	NaN	4867	4013	8876
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8883	27.758	NaN	1826.4	30	0	189.43	0.034			+	47148	VLRHLASL	8	49	454.7875984707022	907.5606440082045	2	454.7869567871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VLRHLASL_	REV__ENSG00000221829|ENST00000378643|FANCG;REV__ENST00000461149.1_1_9:35078119-35078602:-|nuORF	20.481830146152948	0.8005983782650069	3				NaN	NaN	0	NaN	4868	4013	8876
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8890	27.776	NaN	2106.5	30	0	451.49	0.214	+			20574	KFTPVASKF	9	58	512.7948552821608	NaN	0	512.794677734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KFTPVASKF_	ENSG00000159840|ENST00000322764|ZYX;ENST00000446634.1_1_7:143080130-143081191:+|nuORF;nc|ENSG00000159840|Q15942-2|ZYX	65.15724298150197	0.1273232316122292	3				NaN	NaN	0	NaN	4872	4016	8889
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8891	27.779	NaN	3959.5	30	0	751.13	0.106	+			41799	SVSQPIMVQR	10	73	572.8109146889967	1143.6072764447933	2	572.81103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVSQPIMVQR_	ENSG00000134644|ENST00000426105|PUM1;nc|ENSG00000134644|Q14671-2|PUM1;nc|ENSG00000134644|Q14671|PUM1	102.95473732560676	0.06892206462712186	3				NaN	NaN	0	NaN	4873	4016	8889
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8892	27.781	NaN	2715.7	30	0	453.15	0.106	+			39527	STFSAPLNK	9	63	482.75775678933815	963.5009606454763	2	482.75823974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STFSAPLNK_	ENSG00000163026|ENST00000295148|WDCP;nc|ENSG00000163026|Q9H6R7-2|WDCP	47.657333605630114	0.33044192980041115	3				NaN	NaN	0	NaN	4874	4016	8889
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8893	27.783	NaN	1589.2	30	0	162.77	0.106			+	-1	YFVCGASWLD	10	60	609.2683702836896	1216.522187634179	2	609.2683715820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_YFVC(Carbamidomethyl (C))GASWLD_	REV__ENSG00000080823|ENST00000361847|MOK;REV__ENST00000518686.5_1_14:102700023-102771389:-|nuORF;REV__MOK|p.F202Lfs*5|1|0.24|ENSG00000080823|chr14:102233774-102233775|-/CC|frameshift_variant;REV__nc|ENSG00000080823|Q9UQ07-2|MOK;REV__nc|ENSG00000080823|Q9UQ07-5|MOK;REV__nc|ENSG00000080823|Q9UQ07-6|MOK	29.14955571784316	0.6417842315402807	3				NaN	NaN	0	NaN	4875	4016	8889
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8894	27.785	NaN	1860.8	30	0	152.32	0.106	+			24056	LEHSIKPL	8	60	468.779566538305	935.54458014341	2	468.779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LEHSIKPL_	ENSG00000175054|ENST00000350721|ATR;ENST00000507620.2_1_3:142215312-142218583:-|nuORF;nc|ENSG00000175054|Q13535-2|ATR;nc|ENSG00000175054|Q13535-3|ATR	45.9519527083369	0.6193794311207887	3				NaN	NaN	0	NaN	4876	4016	8889
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8895	27.787	NaN	2298.8	30	0	539.99	0.036	+			29469	PCQEQAAVLN	10	61	536.7574241605422	1071.5002953878843	2	536.756591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PCQEQAAVLN_	ENSG00000175265|ENST00000359187|GOLGA8A;ENSG00000215252|ENST00000683415|GOLGA8B;nc|ENSG00000175265|A7E2F4|GOLGA8A	29.14955571784316	0.6417842315402807	3				NaN	NaN	0	NaN	4877	4016	8889
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8896	27.787	NaN	1278.6	30	0	102.44	0.14	+			8160	EAAKLQTTK	9	62	495.28387974220914	NaN	0	495.2839660644531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EAAKLQTTK_	ENSG00000106344|ENST00000223073|RBM28;nc|ENSG00000106344|Q9NW13-2|RBM28;RBM28|p.M599*|2|0.24|ENSG00000106344|chr7:128315014-128315014|T/-|frameshift_variant	36.446750945000026	0.29355505452396785	3				NaN	NaN	0	NaN	4878	4016	8889
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8903	27.807	NaN	6426.4	30	0	1582.5	0.214	+			11654	FQHVGQTL	8	70	465.2456843831558	928.4768158331116	2	465.2454528808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FQHVGQTL_	ENSG00000112159|ENST00000369393|MDN1;MDN1|p.L4077Cfs*15|1|0.16|ENSG00000112159|chr6:89680625-89680625|G/-|frameshift_variant;MDN1|p.L5278Ffs*6|1|0.18|ENSG00000112159|chr6:89652273-89652274|-/A|frameshift_variant	74.25504064058377	0.37144338840759816	3				NaN	NaN	0	NaN	4882	4019	8902
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8904	27.81	NaN	4085.8	30	0	333.09	0.106	+			46359	VEKQPPQVL	9	67	519.3034493256717	1036.5923457181434	2	519.30322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VEKQPPQVL_	ENSG00000166888|ENST00000300134|STAT6;nc|ENSG00000166888|P42226-2|STAT6;nc|ENSG00000166888|P42226-3|STAT6;STAT6|p.G815Efs*27|3|0.31|ENSG00000166888|chr12:57096672-57096672|C/-|frameshift_variant	72.09557110113691	0.13172737702934978	3				NaN	NaN	0	NaN	4883	4019	8902
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8905	27.812	NaN	4351.3	30	0	554.55	0.106	+			15364	GTVVGLVNK	9	64	443.77181689731924	885.5290808614385	2	443.7716064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTVVGLVNK_	ASH1L|p.H1793Ifs*7|1|0.13|ENSG00000116539|chr1:155438778-155438778|G/-|frameshift_variant;ASH1L|p.I970Lfs*9|1|0.2|ENSG00000116539|chr1:155479962-155479962|T/-|frameshift_variant;ASH1L|p.K1222Rfs*11|4|0.27|ENSG00000116539|chr1:155479205-155479205|T/-|frameshift_variant;ASH1L|p.K1533Sfs*17|1|0.25|ENSG00000116539|chr1:155478272-155478272|T/-|frameshift_variant;ASH1L|p.K2377Nfs*5|1|0.28|ENSG00000116539|chr1:155354570-155354570|T/-|frameshift_variant;ASH1L|p.N1822Tfs*2|1|0.33|ENSG00000116539|chr1:155438690-155438690|T/-|frameshift_variant;ASH1L|p.R712Efs*23|3|0.35|ENSG00000116539|chr1:155480736-155480736|T/-|frameshift_variant;ASH1L|p.S2309Ifs*11|1|0.64|ENSG00000116539|chr1:155357635-155357636|-/T|frameshift_variant;ENSG00000116539|ENST00000392403|ASH1L;nc|ENSG00000116539|Q9NR48|ASH1L	67.49366992349736	0.1516260258713357	3				NaN	NaN	0	NaN	4884	4019	8902
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8906	27.814	NaN	3147	30	0	419.66	0.106	+			1883	AILTTVTQK	9	54	487.79806515320985	973.5815773732197	2	487.7976379394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AILTTVTQK_	ENSG00000198677|ENST00000358746|SKIC3;ENST00000513232.1_1_5:94857997-94861145:-|nuORF	77.31757898189308	0.1091473830098891	3				NaN	NaN	0	NaN	4885	4019	8902
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8907	27.816	NaN	905.82	30	0	189.03	0.106				-1	CCCCSCSCL	9	40	384.7725830078125	NaN	0	384.7725830078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	4 Carbamidomethyl (C)	_C(Carbamidomethyl (C))C(Carbamidomethyl (C))CCSC(Carbamidomethyl (C))SC(Carbamidomethyl (C))L_	ENSG00000091844|ENST00000206262|RGS17;ENSG00000147509|ENST00000297313|RGS20;nc|ENSG00000147509|O76081-2|RGS20;nc|ENSG00000147509|O76081-5|RGS20;nc|ENSG00000147509|O76081-6|RGS20	14.864876125193954	0.3866709117995958	3				NaN	NaN	0	NaN	4886	4019	8902
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8908	27.818	NaN	1559.3	30	0	253.42	0.038			+	4057	ATDIKHKKQT	10	36	390.56031098592285	NaN	0	390.55987548828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATDIKHKKQT_	REV__sp|F5H991|US26_HCMVMProteinUS26OS=Humancytomegalovirus(strainMerlin)OX=295027GN=US26PE=3SV=1;REV__sp|P09699|US26_HCMVAUncharacterizedproteinHHLF5OS=Humancytomegalovirus(strainAD169)OX=10360GN=US26PE=3SV=1	26.063383197487333	0.4145965855542893	3				NaN	NaN	0	NaN	4887	4019	8902
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8912	27.832	NaN	17821	30	0	4746.6	0.214	+			39465	STFDTQITK	9	77	520.766729737049	1039.518906540898	2	520.7667236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STFDTQITK_	ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC;PRKDC|p.D2437Wfs*3|1|0.11|ENSG00000253729|chr8:47840161-47840162|-/CA|frameshift_variant;PRKDC|p.K3681Nfs*6|1|0.32|ENSG00000253729|chr8:47785174-47785177|TTCT/-|frameshift_variant;PRKDC|p.M3670*|1|0.5|ENSG00000253729|chr8:47785212-47785212|T/-|frameshift_variant;PRKDC|p.M3846Cfs*12|1|0.13|ENSG00000253729|chr8:47779047-47779047|T/-|frameshift_variant;PRKDC|p.M4020Cfs*2|1|0.31|ENSG00000253729|chr8:47776968-47776968|T/-|frameshift_variant;PRKDC|p.N3605Kfs*3|1|0.22|ENSG00000253729|chr8:47788993-47788994|-/T|frameshift_variant;PRKDC|p.N4037Ifs*15|1|0.17|ENSG00000253729|chr8:47776916-47776916|T/-|frameshift_variant;PRKDC|p.R2704Gfs*13|2|0.34|ENSG00000253729|chr8:47834238-47834238|T/-|frameshift_variant;PRKDC|p.S3402Ifs*16|1|0.04|ENSG00000253729|chr8:47799302-47799303|-/AAACCGTGAGTTAGAGGAGGTAA|frameshift_variant;PRKDC|p.S4099Qfs*6|1|0.25|ENSG00000253729|chr8:47774265-47774265|A/-|frameshift_variant;PRKDC|p.T3268Pfs*7|1|0.5|ENSG00000253729|chr8:47803426-47803426|T/-|frameshift_variant;PRKDC|p.W3401Cfs*4|1|0.01|ENSG00000253729|chr8:47799304-47799305|-/AATGAATA|frameshift_variant	182.3913890336628	0.0010559746847940753	3				NaN	NaN	0	NaN	4888	4022	8911
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8913	27.835	NaN	5745.8	30	0	651.27	0.106	+			16496	HETSNINDF	9	71	538.7363741653796	1075.4581953975592	2	538.736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HETSNINDF_	ENSG00000135821|ENST00000331872|GLUL;ENST00000603996.1_1_5:151230113-151230284:+|nuORF	58.22992032128504	0.22837015374068087	3				NaN	NaN	0	NaN	4889	4022	8911
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8914	27.837	NaN	2810.6	30	0	408.59	0.106	+			7271	DANPETHAF	9	65	501.22011369768546	1000.425674462171	2	501.2191467285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DANPETHAF_	ENSG00000100412|ENST00000216254|ACO2	58.22992032128504	0.22837015374068087	3				NaN	NaN	0	NaN	4890	4022	8911
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8915	27.839	NaN	2272.8	30	0	255.75	0.106			+	24461	LGFSAMKLC	9	60	485.2481078614279	968.4816627896558	2	485.2478942871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LGFSAMKLC_	REV__ENST00000430998.6_1_10:4699836-4701809:-|nuORF	30.503639358989545	0.5181749237905803	3				NaN	NaN	0	NaN	4891	4022	8911
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8916	27.841	NaN	1696.4	30	0	127.16	0.106	+			750	AEEAARLSV	9	56	473.2538191372722	944.4930853413445	2	473.2536926269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEEAARLSV_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	61.691277971877994	0.19951612995419254	3				NaN	NaN	0	NaN	4892	4022	8911
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8917	27.843	NaN	918.23	30	0	63.627	0.106			+	33690	RPASVLTV	8	45	421.7581604598164	NaN	0	421.7582092285156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RPASVLTV_	REV__ENSG00000170892|ENST00000396388|TSEN34;REV__ENST00000496583.1_1_19:54695101-54695536:+|nuORF	47.91560031466742	1.7418937515398478	3				NaN	NaN	0	NaN	4893	4022	8911
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8918	27.845	NaN	494.45	30	0	140.66	0.03			+	37122	SITFRGKR	8	24	322.19355408887253	NaN	0	322.193603515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SITFRGKR_	REV__nc|ENSG00000211958|A0A0C4DH36|IGHV3-38	17.364965105453717	1.7418937515398478	3				NaN	NaN	0	NaN	4894	4022	8911
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8924	27.86	NaN	7900.6	30	0	2379.6	0.214	+			33025	REIQTAVRL	9	75	543.3250023026256	1084.6354516720512	2	543.3255004882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_REIQTAVRL_	ENSG00000124635|ENST00000339812|H2BC11;ENSG00000146047|ENST00000274764|H2BC1;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;nc|ENSG00000203814|Q5QNW6-2|H2BC18	53.59686742100583	0.26699147868981316	3				NaN	NaN	0	NaN	4897	4025	8923
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8925	27.864	NaN	6350.8	30	0	3400.6	0.106	+			40753	SVDGVILTK	9	60	466.2767191820001	930.5388854308002	2	466.2765808105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVDGVILTK_	tr|U7T8Q8|U7T8Q8_FUSNUSignalrecognitionparticleproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=ffhPE=3SV=1	45.97224482568171	0.3502073465782774	3				NaN	NaN	0	NaN	4898	4025	8923
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8926	27.866	NaN	9766.1	30	0	1379	0.106	+			22652	KTYGEIFEK	9	66	372.197824966917	1113.571645500951	3	372.19744873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KTYGEIFEK_	ENSG00000151366|ENST00000281031|NDUFC2;nc|ENSG00000151366|O95298-2|NDUFC2	61.691277971877994	0.19951612995419254	3				NaN	NaN	0	NaN	4899	4025	8923
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8927	27.868	NaN	2660.8	30	0	518.66	0.106			+	18810	ITVEHDNI	8	59	470.7404963094353	939.4664396856706	2	470.73992919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ITVEHDNI_	REV__ENSG00000143891|ENST00000272252|GALM	54.776311868738084	0.5534952410049249	3				NaN	NaN	0	NaN	4900	4025	8923
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8928	27.869	NaN	2075.8	30	0	381.2	0.106	+			17949	IGPTTARAL	9	54	450.2691070543354	898.5236611754708	2	450.2688903808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IGPTTARAL_	ENSG00000188690|ENST00000368797|UROS;ENST00000465577.5_1_10:127477439-127486658:-|nuORF;ENST00000470483.1_1_10:127477439-127483604:-|nuORF	36.446750945000026	0.4619375763483977	3				NaN	NaN	0	NaN	4901	4025	8923
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8929	27.871	NaN	3126.1	30	0	1283.2	0.106	+			46604	VFSHNHKLI	9	47	365.54204373478234	1093.604301804547	3	365.5418395996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VFSHNHKLI_	ENSG00000072210|ENST00000176643|ALDH3A2;ENST00000472059.5_1_17:19558694-19578882:+|nuORF;ENST00000476965.5_1_17:19559657-19578882:+|nuORF;nc|ENSG00000072210|P51648-2|ALDH3A2	20.94693142431847	0.6074874384046576	3				NaN	NaN	0	NaN	4902	4025	8923
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8930	27.873	NaN	1437.3	30	0	164.13	0.035	+			33846	RREWGGLL	8	50	493.779932050271	985.545311167342	2	493.7797546386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RREWGGLL_	ENST00000397226.2_2_2:37423715-37423799:+|nuORF	44.116797842482775	0.6307669463330267	3				NaN	NaN	0	NaN	4903	4025	8923
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8935	27.887	NaN	29971	30	0	8087.3	0.214	+			22653	KTYGEIFEK	9	75	557.7928526393496	1113.571152345499	2	557.7929077148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTYGEIFEK_	ENSG00000151366|ENST00000281031|NDUFC2;nc|ENSG00000151366|O95298-2|NDUFC2	160.8219353732433	0.004346709298329381	3				NaN	NaN	0	NaN	4905	4028	8934
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8936	27.891	NaN	2304.6	30	0	306.58	0.106	+			28738	NNSNWNLR	8	63	509.24748475635465	1016.4804165795093	2	509.2477111816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NNSNWNLR_	ENSG00000129071|ENST00000429544|MBD4;MBD4|p.E314Kfs*4|1|0.74|ENSG00000129071|chr3:129436705-129436705|T/-|frameshift_variant;MBD4|p.K313Rfs*13|2|0.15|ENSG00000129071|chr3:129436705-129436706|TT/-|frameshift_variant;MBD4|p.P430Hfs*61|1|0.1|ENSG00000129071|chr3:129433972-129433972|G/-|frameshift_variant;nc|ENSG00000129071|O95243-3|MBD4;nc|ENSG00000129071|O95243-5|MBD4;nc|ENSG00000129071|O95243|MBD4	45.97224482568171	0.6192535143389125	3				NaN	NaN	0	NaN	4906	4028	8934
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8937	27.893	NaN	1590	30	0	159.04	0.106	+			28767	NPEEIEIDFE	10	55	617.7764312279929	1233.5383095227858	2	617.7761840820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NPEEIEIDFE_	ENSG00000204256|ENST00000374825|BRD2;ENST00000469132.1_1_6:32947542-32947941:+|nuORF;ENST00000482838.1_1_6:32947542-32948492:+|nuORF;nc|ENSG00000204256|P25440-2|BRD2;nc|ENSG00000204256|P25440-3|BRD2;nc|ENSG00000204256|P25440-4|BRD2	35.15202426646627	0.5927656479315102	3				NaN	NaN	0	NaN	4907	4028	8934
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8938	27.895	NaN	4324.7	30	0	2904.8	0.106			+	35704	SDLEKNLRSY	10	45	408.8783862520034	1223.6133293562102	3	408.87774658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SDLEKNLRSY_	REV__CEP162|p.I224Nfs*16|1|0.5|ENSG00000135315|chr6:84203997-84203998|-/T|frameshift_variant;REV__CEP162|p.K1098Rfs*20|1|0.46|ENSG00000135315|chr6:84152881-84152881|T/-|frameshift_variant;REV__CEP162|p.N1181Mfs*3|2|0.21|ENSG00000135315|chr6:84152632-84152632|T/-|frameshift_variant;REV__CEP162|p.Q686Tfs*11|1|0.39|ENSG00000135315|chr6:84174158-84174159|-/T|frameshift_variant;REV__CEP162|p.R1099Efs*46|2|0.27|ENSG00000135315|chr6:84152880-84152881|-/T|frameshift_variant;REV__ENSG00000135315|ENST00000403245|CEP162;REV__ENST00000497936.5_1_6:84884653-84936120:-|nuORF;REV__nc|ENSG00000135315|Q5TB80-2|CEP162	17.468008924990375	0.7276870902328821	3				NaN	NaN	0	NaN	4908	4028	8934
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8939	27.897	NaN	2277.3	30	0	228.9	0.106			+	24886	LKKGVNEEF	9	64	532.2930846501928	1062.5716163671855	2	532.2930908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LKKGVNEEF_	REV__ENSG00000119946|ENST00000356713|CNNM1;REV__nc|ENSG00000119946|Q9NRU3-2|CNNM1	76.7741389293348	0.11149722112137898	3				NaN	NaN	0	NaN	4909	4028	8934
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8940	27.898	NaN	1606.2	30	0	205.99	0.035	+			18806	ITTITSSQK	9	54	489.77622298369766	977.5378930341953	2	489.7750244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ITTITSSQK_	ENSG00000179008|ENST00000321731|C14orf39	34.172542307311794	0.4838870758800184	3				NaN	NaN	0	NaN	4910	4028	8934
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8944	27.912	NaN	2770.7	30	0	592.01	0.214	+			3231	ASLATTLTK	9	58	453.2689481171253	904.5233433010507	2	453.2684020996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASLATTLTK_	ENSG00000129083|ENST00000439561|COPB1;ENST00000526191.1_1_11:14496007-14497407:-|nuORF	66.96192283764107	0.15557981141143568	3				NaN	NaN	0	NaN	4911	4031	8943
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8945	27.916	NaN	1111.4	30	0	111.19	0.106	+			33797	RQIPYTMMK	9	62	584.3044961547733	1166.5944393763466	2	584.3038940429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RQIPYTMMK_	ENSG00000075415|ENST00000552981|SLC25A3;ENST00000546766.5_1_12:98989476-98995303:+|nuORF;ENST00000551123.5_1_12:98989412-98995303:+|nuORF;nc|ENSG00000075415|Q00325|SLC25A3	51.52775601994872	0.28504342437107444	3				NaN	NaN	0	NaN	4912	4031	8943
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8946	27.918	NaN	1967.6	30	0	287.12	0.106			+	14747	GTKEKKIGF	9	34	336.53422680595446	1006.5808510180634	3	336.5343322753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTKEKKIGF_	REV__ENSG00000110844|ENST00000548825|PRPF40B;REV__nc|ENSG00000110844|Q6NWY9-2|PRPF40B;REV__nc|ENSG00000110844|Q6NWY9-3|PRPF40B;REV__nc|ENSG00000110844|Q6NWY9|PRPF40B	23.04248740728303	0.5879033540491928	3				NaN	NaN	0	NaN	4913	4031	8943
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8947	27.92	NaN	628.65	30	0	208.54	0.106	+			8262	EAGKGGRPGLL	11	29	352.2052441969373	1053.593903191012	3	352.2050476074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EAGKGGRPGLL_	ENSG00000165406|ENST00000453424|MARCHF8	19.1035232394073	0.7810393085260824	3				NaN	NaN	0	NaN	4914	4031	8943
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8948	27.921	NaN	2077.5	30	0	145.26	0.106	+			6881	CLLNCRYK	8	64	506.7582883579794	1011.5020237827588	2	506.75140380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_CLLNCRYK_	nc|ENSG00000145949|Q86YV6-2|MYLK4	50.0245360154114	0.5941082100236891	3				NaN	NaN	0	NaN	4915	4031	8943
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8949	27.923	NaN	761.16	30	0	62.465	0.106				-1	ELYAEAEEMRV	11	41	678.3090877087265	1354.6036224842528	2	678.3075561523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_ELYAEAEEM(Oxidation (M))RV_	ENSG00000133392|ENST00000300036|MYH11;nc|ENSG00000133392|P35749-2|MYH11;nc|ENSG00000133392|P35749-3|MYH11;nc|ENSG00000133392|P35749-4|MYH11	17.468008924990375	0.788697330333842	3				NaN	NaN	0	NaN	4916	4031	8943
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8950	27.925	NaN	1802.1	30	0	265.26	0.035	+			50489	YALKPPPVP	9	53	491.29400634765625	NaN	0	491.29400634765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YALKPPPVP_	ENSG00000180383|ENST00000317676|DEFB124	32.81241826257853	0.3119040447479903	3				NaN	NaN	0	NaN	4917	4031	8943
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8957	27.943	NaN	6477.2	30	0	737.24	0.214	+			1275	AESGVERQVL	10	84	544.2906726843074	1086.5667924354148	2	544.2908325195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AESGVERQVL_	ENSG00000142507|ENST00000270586|PSMB6;ENST00000575643.1_1_17:4701246-4701714:+|nuORF	46.45678178249821	0.4896490706773647	3				NaN	NaN	0	NaN	4921	4034	8956
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8958	27.946	NaN	3765.8	30	0	402.29	0.106	+			24616	LGSALLGWGA	10	63	472.76440340992696	943.5142538866539	2	472.7621154785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LGSALLGWGA_	ENST00000542868.1_1_12:6950213-6950600:+|nuORF	68.484700416344	0.2896999678166231	3				NaN	NaN	0	NaN	4922	4034	8956
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8959	27.948	NaN	2869.6	30	0	287.88	0.106				-1	 	0	53	439.24435225473763	438.23707578813764	1	439.2439270019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4923	4034	8956
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8960	27.95	NaN	4528.5	30	0	457.09	0.106	+			44120	TPYKGGNLY	9	67	506.7582883579794	1011.5020237827588	2	506.75689697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TPYKGGNLY_	ENSG00000144674|ENST00000361924|GOLGA4;nc|ENSG00000144674|Q13439-3|GOLGA4;nc|ENSG00000144674|Q13439-4|GOLGA4;nc|ENSG00000144674|Q13439-5|GOLGA4	76.7741389293348	0.11149722112137898	3				NaN	NaN	0	NaN	4924	4034	8956
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8961	27.952	NaN	1661	30	0	233.26	0.106	+			35124	SAHEMGFL	8	53	446.20527734999257	890.3960017667852	2	446.204833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SAHEMGFL_	L1PA3_dup1321|chr2:173527290-173533317:-|1.892281258594111|0.2637255971055219|2.84|482.0|343|3|anti-sense	35.200714571348534	0.6875396545722289	3				NaN	NaN	0	NaN	4925	4034	8956
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8962	27.954	NaN	1805.4	30	0	292.28	0.106			+	44716	TTLGALIKSG	10	51	480.7904597440346	959.5663665548692	2	480.78961181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TTLGALIKSG_	REV__ENSG00000109424|ENST00000262999|UCP1;REV__UCP1|p.I130Mfs*8|1|0.27|ENSG00000109424|chr4:140563454-140563454|A/-|frameshift_variant	26.69291269510374	0.6618461711292317	3				NaN	NaN	0	NaN	4926	4034	8956
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8963	27.955	NaN	1476.7	30	0	122.86	0.037			+	24994	LLEMRDKES	9	69	560.7864067253319	NaN	0	560.7864990234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LLEMRDKES_	REV__ENSG00000117616|ENST00000243189|RSRP1;REV__nc|ENSG00000117616|Q9BUV0-2|RSRP1;REV__nc|ENSG00000117616|Q9BUV0-3|RSRP1	32.81241826257853	0.3119040447479903	3				NaN	NaN	0	NaN	4927	4034	8956
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8970	27.972	NaN	18390	30	0	2857.3	0.214	+			45523	TYHPPGQTF	9	69	524.2484025552328	1046.4822521772655	2	524.2484741210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TYHPPGQTF_	FCGBP-ACSS2|1|fusion;nc|ENSG00000275395|Q9Y6R7|FCGBP	131.03138772384656	0.014687601201650916	3				NaN	NaN	0	NaN	4931	4037	8969
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8971	27.975	NaN	8150.1	30	0	991.91	0.106	+			2685	AQNSVIIVDK	10	70	543.811790558107	1085.6090281830138	2	543.8119506835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AQNSVIIVDK_	ENSG00000072274|ENST00000360110|TFRC	110.54063921016906	0.04639402190081153	3				NaN	NaN	0	NaN	4932	4037	8969
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8972	27.977	NaN	3650.8	30	0	298.15	0.106	+			11018	FEKIHQETF	9	71	589.7957742230335	1177.576995512867	2	589.7952270507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FEKIHQETF_	ENSG00000189091|ENST00000302516|SF3B3;nc|ENSG00000189091|Q15393-2|SF3B3	93.44185321454538	0.05516163498041208	3				NaN	NaN	0	NaN	4933	4037	8969
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8973	27.979	NaN	3580.3	30	0	233.57	0.106	+			2208	ALQEIYNQK	9	66	553.7959446360226	1105.577336338845	2	553.7957153320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ALQEIYNQK_	ENSG00000160216|ENST00000291572|AGPAT3;ENST00000484865.1_1_21:45391291-45401085:+|nuORF;nc|ENSG00000160216|Q9NRZ7-2|AGPAT3;nc|ENSG00000160216|Q9NRZ7-3|AGPAT3	77.31757898189308	0.1091473830098891	3				NaN	NaN	0	NaN	4934	4037	8969
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8974	27.981	NaN	1992	30	0	197.72	0.106	+			46073	VCPLWHPL	8	58	482.75775678933815	963.5009606454763	2	483.256591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VCPLWHPL_	ENST00000329146.8_1_14:105946005-105946200:+|nuORF	33.49298260027079	0.7007254697536482	3				NaN	NaN	0	NaN	4935	4037	8969
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8975	27.983	NaN	3651.8	30	0	1361.3	0.038	+			34512	RVFVVGVGMTK	11	69	604.844944965448	1207.675336997696	2	605.345947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_RVFVVGVGM(Oxidation (M))TK_	ENSG00000116171|ENST00000371514|SCP2;ENST00000528311.5_1_1:53392996-53413692:+|nuORF;nc|ENSG00000116171|P22307-3|SCP2;nc|ENSG00000116171|P22307-7|SCP2;nc|ENSG00000116171|P22307-8|SCP2	48.601550744091256	0.44024757269956427	3				NaN	NaN	0	NaN	4936	4037	8969
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8981	27.997	NaN	8227.8	30	0	1007.2	0.214	+			45491	TYDNVHQQF	9	76	576.2596858503225	1150.504818767445	2	576.2597045898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TYDNVHQQF_	ENSG00000138639|ENST00000395184|ARHGAP24;nc|ENSG00000138639|Q8N264-2|ARHGAP24;nc|ENSG00000138639|Q8N264-3|ARHGAP24	117.81106730687013	0.02252488733980868	3				NaN	NaN	0	NaN	4939	4040	8980
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8982	28.001	NaN	9412.6	30	0	1500.9	0.106	+			3743	ATADLALGR	9	65	444.25112906276	886.48770519232	2	444.250732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATADLALGR_	ENSG00000172037|ENST00000305544|LAMB2;ENST00000469665.1_1_3:49160056-49160527:-|nuORF	132.757866228626	0.013877640931359021	3				NaN	NaN	0	NaN	4940	4040	8980
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8983	28.003	NaN	2386.6	30	0	246.74	0.106			+	15985	HAKQHRSL	8	65	488.77582531889755	975.5370977045951	2	488.7766418457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HAKQHRSL_	REV__ENSG00000204644|ENST00000376883|ZFP57;REV__nc|ENSG00000204644|Q9NU63-2|ZFP57;REV__nc|ENSG00000204644|Q9NU63|ZFP57;REV__ZFP57|p.R423Gfs*10|1|0.22|ENSG00000204644|chr6:29672593-29672593|G/-|frameshift_variant	38.80614096846853	0.6637206697844082	3				NaN	NaN	0	NaN	4941	4040	8980
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8984	28.004	NaN	1880.7	30	0	412.79	0.106			+	51000	YISTEHGKPF	10	44	393.53328861722036	1177.5780364518612	3	393.867431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YISTEHGKPF_	REV__ENST00000485928.5_1_1:33791428-33799821:-|nuORF;REV__nc|ENSG00000134686|Q8IXK0-3|PHC2	23.52269567125451	0.6877354443478558	3				NaN	NaN	0	NaN	4942	4040	8980
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8985	28.006	NaN	5047.6	30	0	500.17	0.106				-1	RVFVVGVGMTK	11	50	403.56599869974696	1207.676166699441	3	403.5657043457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_RVFVVGVGM(Oxidation (M))TK_	ENSG00000116171|ENST00000371514|SCP2;ENST00000528311.5_1_1:53392996-53413692:+|nuORF;nc|ENSG00000116171|P22307-3|SCP2;nc|ENSG00000116171|P22307-7|SCP2;nc|ENSG00000116171|P22307-8|SCP2	31.068146907933308	0.6639116734509778	3				NaN	NaN	0	NaN	4943	4040	8980
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8986	28.008	NaN	1228.8	30	0	144.67	0.106	+			35766	SDYQQQQSL	9	59	548.7495423744907	NaN	0	548.7496948242188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SDYQQQQSL_	ENSG00000106546|ENST00000242057|AHR	85.86182877749512	0.05129763505578642	3				NaN	NaN	0	NaN	4944	4040	8980
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8987	28.01	NaN	716.05	30	0	60.681	0.038			+	-1	EEDKLPTACW	10	39	624.7796020507812	NaN	0	624.7796020507812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_EEDKLPTAC(Carbamidomethyl (C))W_	REV__TRRAP|p.R1216W|1|0.17|ENSG00000196367|chr7:98931459-98931459|C/T|missense_variant	14.137123925751023	0.4201028297492154	3				NaN	NaN	0	NaN	4945	4040	8980
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8996	28.03	NaN	6674.6	30	0	727.56	0.214	+			21591	KPITTGGVTY	10	70	518.7879093407329	1035.5612657482657	2	518.78759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KPITTGGVTY_	ENSG00000115641|ENST00000530340|FHL2	91.26522074875469	0.12383023862516404	3				NaN	NaN	0	NaN	4951	4043	8995
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8997	28.033	NaN	9527.8	30	0	881.4	0.106				-1	 	0	77	533.798991434378	1065.5834299355558	2	533.7982177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4952	4043	8995
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8998	28.035	NaN	2095.3	30	0	1343.3	0.106				-1	 	0	38	343.19918885250013	684.3838247718003	2	343.1989440917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4953	4043	8995
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8999	28.037	NaN	3517	30	0	259.62	0.106	+			3615	ASVSTVLTSK	10	68	496.78508925246246	991.5556255717249	2	496.7845458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASVSTVLTSK_	ENSG00000188536|ENST00000251595|HBA2;ENSG00000206172|ENST00000320868|HBA1	53.59686742100583	0.4240759338601513	3				NaN	NaN	0	NaN	4954	4043	8995
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9000	28.039	NaN	3759.4	30	0	656.37	0.106	+			12541	GEGDTVRCF	9	66	520.7271029238219	1039.4396529144437	2	520.7273559570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_GEGDTVRC(Carbamidomethyl (C))F_	ENSG00000101966|ENST00000371199|XIAP	54.722347961057174	0.257609425301511	3				NaN	NaN	0	NaN	4955	4043	8995
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9001	28.041	NaN	2383.2	30	0	244.19	0.106	+			26459	LTIPCRAVT	9	57	487.27783276892626	972.5411126046525	2	487.2760925292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LTIPCRAVT_	ENSG00000078043|ENST00000585916|PIAS2;ENST00000590127.5_1_18:44407908-44497416:-|nuORF;ENST00000592011.5_1_18:44416318-44500057:-|nuORF;nc|ENSG00000078043|O75928-2|PIAS2;nc|ENSG00000078043|O75928-3|PIAS2	44.377184641726394	0.36891676396732553	3				NaN	NaN	0	NaN	4956	4043	8995
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9002	28.042	NaN	1504.3	30	0	129.73	0.037			+	51051	YLEQDLLASD	10	62	583.7846218197539	1165.5546907063076	2	583.7855224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YLEQDLLASD_	REV__ENSG00000154845|ENST00000400556|PPP4R1;REV__ENST00000285124.12_1_18:9562972-9595043:-|nuORF;REV__ENST00000578557.1_1_18:9562972-9570431:-|nuORF;REV__nc|ENSG00000154845|Q8TF05-2|PPP4R1;REV__PPP4R1|p.K793Sfs*34|1|0.1|ENSG00000154845|chr18:9550311-9550312|TT/-|frameshift_variant	58.22992032128504	0.38193887838457763	3				NaN	NaN	0	NaN	4957	4043	8995
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9007	28.057	NaN	3583.2	30	0	1255	0.214			+	-1	NWELGAEEMS	10	47	591.2436570113344	1180.4727610894688	2	591.2439575195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_NWELGAEEM(Oxidation (M))S_	REV__ENSG00000162419|ENST00000373816|GMEB1;REV__GMEB1|p.E282Gfs*96|1|0.06|ENSG00000162419|chr1:28704275-28704276|-/GTAAAAA|frameshift_variant;REV__nc|ENSG00000162419|Q9Y692|GMEB1	19.1035232394073	0.7193765342308498	3				NaN	NaN	0	NaN	4959	4046	9006
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9008	28.06	NaN	3624.9	30	0	281.16	0.106	+			36053	SEISSATKL	9	63	468.2558239006037	934.4970948680074	2	468.2554931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEISSATKL_	ATRX|p.I1049*|1|0.07|ENSG00000085224|chrX:77682111-77682111|T/-|frameshift_variant;ATRX|p.I1049Nfs*4|1|0.15|ENSG00000085224|chrX:77682110-77682111|-/T|frameshift_variant;ATRX|p.K993Rfs*10|1|0.26|ENSG00000085224|chrX:77682278-77682278|T/-|frameshift_variant;ATRX|p.N1318Ifs*28|1|0.39|ENSG00000085224|chrX:77663549-77663549|T/-|frameshift_variant;ATRX|p.Q1385Sfs*6|1|0.26|ENSG00000085224|chrX:77656621-77656622|-/A|frameshift_variant;ATRX|p.R840Kfs*9|1|0.36|ENSG00000085224|chrX:77682737-77682738|-/T|frameshift_variant;ENSG00000085224|ENST00000373344|ATRX;nc|ENSG00000085224|P46100-2|ATRX;nc|ENSG00000085224|P46100-3|ATRX;nc|ENSG00000085224|P46100-4|ATRX;nc|ENSG00000085224|P46100-5|ATRX;nc|ENSG00000085224|P46100-6|ATRX	54.722347961057174	0.257609425301511	3				NaN	NaN	0	NaN	4960	4046	9006
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9009	28.062	NaN	3847.8	30	0	708.09	0.106	+			41674	SVSAVNLPK	9	48	457.76912331865714	913.5236937041143	2	457.76849365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVSAVNLPK_	ENSG00000116871|ENST00000474796|MAP7D1;MAP7D1|p.A565Rfs*10|1|0.29|ENSG00000116871|chr1:36178180-36178180|C/-|frameshift_variant;MAP7D1|p.C481Afs*94|2|0.29|ENSG00000116871|chr1:36177929-36177929|C/-|frameshift_variant;MAP7D1|p.R498Efs*77|2|0.32|ENSG00000116871|chr1:36177980-36177980|C/-|frameshift_variant;nc|ENSG00000116871|Q3KQU3-4|MAP7D1;nc|ENSG00000116871|Q3KQU3|MAP7D1	56.72105179125745	0.24094814563026265	3				NaN	NaN	0	NaN	4961	4046	9006
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9010	28.064	NaN	2279.9	30	0	183.29	0.106	+			13593	GLVLSLMSH	9	60	478.7661016391503	955.5176503451006	2	478.765380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GLVLSLMSH_	ENSG00000188352|ENST00000338382|FOCAD	68.484700416344	0.1473408039581241	3				NaN	NaN	0	NaN	4962	4046	9006
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9011	28.066	NaN	2508.7	30	0	819.8	0.106	+			26024	LSLELYPAP	9	53	501.77757369445044	1001.5405944557009	2	501.777099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSLELYPAP_	ENSG00000116726|ENST00000357726|PRAMEF12;ENSG00000182330|ENST00000357367|PRAMEF8;ENSG00000204510|ENST00000697200|PRAMEF7	53.351449002276354	0.2690372970092375	3				NaN	NaN	0	NaN	4963	4046	9006
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9012	28.068	NaN	1182.9	30	0	95.498	0.106	+			951	AEIVTKTI	8	52	437.76628976310445	873.5180265930089	2	437.7655029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEIVTKTI_	ENSG00000144028|ENST00000323853|SNRNP200;ENST00000497539.5_1_2:96940752-96950410:-|nuORF	71.87747018426188	0.391254423828572	3				NaN	NaN	0	NaN	4964	4046	9006
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9013	28.07	NaN	2155.6	30	0	848.19	0.038	+			33893	RRRERKQPA	9	43	399.5756117850358	1195.7050059553073	3	399.9090881347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RRRERKQPA_	ENST00000361875.7_1_3:150126772-150126880:+|nuORF	36.446750945000026	0.4619375763483977	3				NaN	NaN	0	NaN	4965	4046	9006
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9018	28.084	NaN	10022	30	0	5096.4	0.215	+			15898	HAALETQTL	9	65	492.26192322800904	982.5092935228181	2	492.26129150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HAALETQTL_	ENSG00000176945|ENST00000447234|MUC20;ENST00000457750.1_1_3:195341833-195346985:+|nuORF;nc|ENSG00000176945|Q8N307-3|MUC20	54.776311868738084	0.25715957988447635	3				NaN	NaN	0	NaN	4967	4049	9017
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9019	28.087	NaN	2762.6	30	0	574.24	0.106	+			27566	MPFKKGAAF	9	55	498.77078570757476	995.5270184819495	2	498.7703552246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MPFKKGAAF_	ENSG00000171747|ENST00000307751|LGALS4	73.97473282117947	0.12360187025703594	3				NaN	NaN	0	NaN	4968	4049	9017
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9020	28.089	NaN	2681.2	30	0	575.03	0.106	+			42144	SYPRRFSTL	9	70	563.8039415297937	1125.5933301263874	2	563.8045043945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SYPRRFSTL_	ENST00000403825.7_1_7:112090541-112090697:+|nuORF	40.77816245573522	0.41113185337114944	3				NaN	NaN	0	NaN	4969	4049	9017
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9021	28.091	NaN	6820.4	30	0	731.96	0.106				-1	DLLNKGQCVTK	11	59	425.8959551019793	1274.666035906138	3	425.89569091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_DLLNKGQC(Carbamidomethyl (C))VTK_	ENSG00000151322|ENST00000356141|NPAS3;nc|ENSG00000151322|Q8IXF0-2|NPAS3;nc|ENSG00000151322|Q8IXF0-3|NPAS3;nc|ENSG00000151322|Q8IXF0-4|NPAS3;NPAS3|p.L707Cfs*103|1|0.35|ENSG00000151322|chr14:33800420-33800420|G/-|frameshift_variant	61.76455937419982	0.30770400073182314	3				NaN	NaN	0	NaN	4970	4049	9017
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9022	28.093	NaN	2035.8	30	0	313.53	0.106			+	46578	VFNKKSSVV	9	61	504.29783590218767	NaN	0	504.2978820800781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VFNKKSSVV_	REV__ROCK1|p.I1150Nfs*5|1|0.23|ENSG00000067900|chr18:20959903-20959904|-/T|frameshift_variant	38.80614096846853	0.28164298475537564	3				NaN	NaN	0	NaN	4971	4049	9017
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9023	28.095	NaN	3405.2	30	0	1213.5	0.106	+			25246	LNIHNEEF	8	64	508.2462142022735	1014.477875471347	2	508.2451477050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LNIHNEEF_	ENSG00000148143|ENST00000277225|ZNF462;nc|ENSG00000148143|Q96JM2-2|ZNF462;nc|ENSG00000148143|Q96JM2-3|ZNF462	38.80614096846853	0.6637206697844082	3				NaN	NaN	0	NaN	4972	4049	9017
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9024	28.097	NaN	1408.7	30	0	131.8	0.033				-1	 	0	54	440.6957435543387	879.3769341754775	2	440.6947326660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4973	4049	9017
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9029	28.111	NaN	3415.6	30	0	259.74	0.214	+			17685	IEKSVSEAL	9	64	488.2716863928146	NaN	0	488.2713317871094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IEKSVSEAL_	ENSG00000271601|ENST00000604000|LIX1L	93.1432384553994	0.0352600271724948	3				NaN	NaN	0	NaN	4975	4052	9028
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9030	28.114	NaN	2313.8	30	0	129.79	0.039	+			20186	KEKYIDQEEL	10	72	647.8303813369204	1293.6462097406406	2	647.8300170898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEKYIDQEEL_	ENSG00000080824|ENST00000216281|HSP90AA1;ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000507090.2_1_4:13338641-13339112:+|nuORF;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;HSP90AA1|p.K419Nfs*3|1|0.25|ENSG00000080824|chr14:102083874-102083874|T/-|frameshift_variant;HSP90AA1|p.S330Qfs*48|1|0.21|ENSG00000080824|chr14:102084558-102084558|A/-|frameshift_variant;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000205940|Q58FF8|HSP90AB2P;nc|ENSG00000224411|Q14568|HSP90AA2P	117.7056744995986	0.030570130731382417	3				NaN	NaN	0	NaN	4976	4052	9028
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9038	28.133	NaN	4482.9	30	0	550.94	0.214	+			18762	ITNDGATILK	10	68	523.2981349914528	1044.5817170497055	2	523.2986450195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ITNDGATILK_	CCT4|p.T490Lfs*30|1|0.4|ENSG00000115484|chr2:61872105-61872105|T/-|frameshift_variant;ENSG00000115484|ENST00000394440|CCT4;ENSG00000120438|ENST00000321394|TCP1;ENST00000538128.5_2_6:160206507-160210586:-|nuORF;ENST00000543532.5_1_6:160205081-160210626:-|nuORF;ENST00000544255.5_1_6:160205081-160210586:-|nuORF;TCP1|p.A232Gfs*7|1|0.05|ENSG00000120438|chr6:159784043-159784044|-/C|frameshift_variant	61.76455937419982	0.3497917639301274	3				NaN	NaN	0	NaN	4981	4055	9037
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9039	28.136	NaN	2490.2	30	0	760.62	0.106	+			32046	QRSKAGWQNS	10	50	581.2925369099635	1160.5705208867269	2	581.2922973632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QRSKAGWQNS_	ENSG00000214336|ENST00000428390|FOXI3	23.52269567125451	0.6877354443478558	3				NaN	NaN	0	NaN	4982	4055	9037
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9040	28.138	NaN	2508.3	30	0	355.32	0.106			+	25101	LLPHSGPLGA	10	58	481.2763547421405	960.538156551081	2	481.2754821777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LLPHSGPLGA_	REV__ENST00000589764.1_1_18:12067489-12068164:-|nuORF	38.80614096846853	0.5601458937078225	3				NaN	NaN	0	NaN	4983	4055	9037
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9041	28.14	NaN	8222.7	30	0	1872.4	0.106				-1	 	0	57	374.19668003286586	1119.5682106987977	3	374.1961364746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4984	4055	9037
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9042	28.142	NaN	993.65	30	0	216.39	0.106	+			44699	TTISRVKLL	9	28	344.22489943061225	NaN	0	344.22503662109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TTISRVKLL_	ENSG00000160783|ENST00000368277|PMF1;ENST00000606952.5_1_1:156182806-156203452:+|nuORF;nc|ENSG00000160783|Q6P1K2-2|PMF1;nc|ENSG00000160783|Q6P1K2-3|PMF1;nc|ENSG00000160783|Q6P1K2-5|PMF1;nc|ENSG00000160783|Q6P1K2-6|PMF1	19.996771675451527	0.3693019437812985	3				NaN	NaN	0	NaN	4985	4055	9037
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9043	28.144	NaN	1830.9	30	0	322.17	0.106			+	-1	CGHSPCSCSH	10	57	537.6813994074106	1073.348245881621	2	537.6822509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_C(Carbamidomethyl (C))GHSPCSCSH_	REV__ENST00000586922.2_1_18:32864420-32870144:-|nuORF	15.641811463095205	0.7369665665077569	3				NaN	NaN	0	NaN	4986	4055	9037
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9044	28.145	NaN	1977.5	30	0	158.33	0.033	+			51351	YSVGSRPL	8	53	439.74175433158035	877.4689557299607	2	439.7400817871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YSVGSRPL_	ENSG00000123836|ENST00000367080|PFKFB2	71.87747018426188	0.391254423828572	3				NaN	NaN	0	NaN	4987	4055	9037
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9050	28.16	NaN	4991.2	30	0	784.58	0.214	+			10834	FASHVSPEV	9	54	486.7433443773346	971.4721358214692	2	486.74249267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FASHVSPEV_	ARFGAP3|p.G224Afs*32|1|0.31|ENSG00000242247|chr22:42823659-42823659|T/-|frameshift_variant;ENSG00000242247|ENST00000263245|ARFGAP3;nc|ENSG00000242247|Q9NP61-2|ARFGAP3	99.37495909608758	0.03983967222258828	3				NaN	NaN	0	NaN	4990	4058	9049
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9051	28.163	NaN	6234.4	30	0	800.89	0.106			+	19624	KDIILWTF	8	64	518.2955189405766	NaN	0	518.295166015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KDIILWTF_	REV__ENST00000502980.1_1_3:98239917-98241743:-|nuORF	40.5726180659479	1.7418937515398478	3				NaN	NaN	0	NaN	4991	4058	9049
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9052	28.165	NaN	4227	30	0	380.4	0.106			+	19159	IYQLIFSSK	9	66	549.8138250429141	1097.6130971526281	2	549.8139038085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IYQLIFSSK_	REV__tr|U7T2B0|U7T2B0_FUSNUPD-(D/E)XKendonuclease-likedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00617PE=4SV=1	70.8162118820467	0.13725933411854815	3				NaN	NaN	0	NaN	4992	4058	9049
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9053	28.167	NaN	2426.1	30	0	292.94	0.106	+			11632	FQELREDDFQ	10	57	663.7994942835767	NaN	0	663.7994995117188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FQELREDDFQ_	ENSG00000101916|ENST00000218032|TLR8;nc|ENSG00000101916|Q9NR97-2|TLR8;TLR8|p.N912Tfs*6|1|0.39|ENSG00000101916|chrX:12921771-12921771|A/-|frameshift_variant;TLR8|p.T437Kfs*11|1|0.07|ENSG00000101916|chrX:12920349-12920350|-/AGTTTGGAAG|frameshift_variant;TLR8|p.Y950Ifs*8|1|0.35|ENSG00000101916|chrX:12921881-12921882|-/A|frameshift_variant	45.97224482568171	0.33106653400957564	3				NaN	NaN	0	NaN	4993	4058	9049
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9054	28.169	NaN	6118.9	30	0	1696.5	0.106			+	-1	LFLRAPAMQQ	10	57	397.5512492762623	1189.6319184289869	3	397.5506896972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_LFLRAPAM(Oxidation (M))QQ_	REV__nc|ENSG00000259024|Q96ET8|TVP23C	42.86426827375447	0.522752283233888	3				NaN	NaN	0	NaN	4994	4058	9049
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9055	28.171	NaN	3364.3	30	0	853.81	0.106			+	-1	PCIFDKVSLCI	11	50	432.2225273601251	1293.6457526805755	3	432.22235107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_PCIFDKVSLC(Carbamidomethyl (C))I_	REV__L1PA8_dup4178|chr8:94121319-94127043:-|4.057818296907117|0.2856926403965029|3.83|481.0|293|2|anti-sense	31.634271133179894	0.6579734920221648	3				NaN	NaN	0	NaN	4995	4058	9049
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9056	28.173	NaN	2404	30	0	390.25	0.036	+			46792	VHLEHGVVY	9	62	526.7801521098648	1051.5457512865296	2	526.7794799804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VHLEHGVVY_	ENSG00000124126|ENST00000371941|PREX1;nc|ENSG00000124126|Q8TCU6-2|PREX1;nc|ENSG00000124126|Q8TCU6-3|PREX1;PREX1|p.L957Pfs*50|1|0.25|ENSG00000124126|chr20:48650154-48650155|-/G|frameshift_variant	52.29916861842294	0.2778091507991977	3				NaN	NaN	0	NaN	4996	4058	9049
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9061	28.186	NaN	11752	30	0	3025.4	0.214	+			44414	TSLPSAICK	9	69	488.76019894325475	975.5058449533095	2	488.75982666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_TSLPSAIC(Carbamidomethyl (C))K_	ENSG00000177731|ENST00000327031|FLII;ENST00000578101.5_1_17:18148454-18160363:-|nuORF;FLII|p.K628Rfs*27|1|0.37|ENSG00000177731|chr17:18249178-18249178|T/-|frameshift_variant;FLII|p.S470Afs*32|1|0.36|ENSG00000177731|chr17:18251454-18251454|G/-|frameshift_variant;nc|ENSG00000177731|Q13045-2|FLII;nc|ENSG00000177731|Q13045-3|FLII	95.81516180277367	0.04847050768394289	3				NaN	NaN	0	NaN	4998	4061	9060
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9062	28.19	NaN	8173.9	30	0	1752.4	0.106	+			42387	TAIREAQTF	9	77	518.7747825844349	1035.5350122356697	2	518.7741088867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAIREAQTF_	BAZ1B|p.A1298Cfs*10|1|0.16|ENSG00000009954|chr7:73444083-73444084|-/G|frameshift_variant;ENSG00000009954|ENST00000339594|BAZ1B;nc|ENSG00000009954|Q9UIG0-2|BAZ1B	53.08895987439943	0.27122541748218487	3				NaN	NaN	0	NaN	4999	4061	9060
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9063	28.192	NaN	3249.5	30	0	1645.5	0.106			+	33287	RGLPEKKV	8	49	463.79272279519887	925.5708926571978	2	463.7923278808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RGLPEKKV_	REV__ENSG00000204103|ENST00000373313|MAFB	23.04248740728303	0.7814162927298575	3				NaN	NaN	0	NaN	5000	4061	9060
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9064	28.194	NaN	1888.6	30	0	145.44	0.106	+			13012	GEVEKYQQL	9	58	547.2810805084355	1092.5476080836709	2	547.2794189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEVEKYQQL_	ENSG00000204220|ENST00000374606|PFDN6;ENST00000395134.3_1_6:33257633-33258228:+|nuORF;ENST00000491382.1_1_6:33257633-33258228:+|nuORF	56.43379154798735	0.2433427591689151	3				NaN	NaN	0	NaN	5001	4061	9060
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9065	28.196	NaN	1290	30	0	102.99	0.106	+			32950	REDAVHAMNNL	11	48	635.3045964006293	1268.5946398680585	2	635.3037719726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_REDAVHAMNNL_	ENSG00000163694|ENST00000295971|RBM47;nc|ENSG00000163694|A0AV96-2|RBM47;RBM47|p.G400Dfs*45|1|0.41|ENSG00000163694|chr4:40436572-40436572|C/-|frameshift_variant	34.08650109265054	0.6322515996262609	3				NaN	NaN	0	NaN	5002	4061	9060
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9066	28.197	NaN	2455.9	30	0	584.96	0.106			+	20878	KINYSFITL	9	47	366.87822213003153	1097.6128369902947	3	366.8777770996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KINYSFITL_	REV__HERV35I-int_dup77|chr3:106541134-106546233:+|1.3860853119714591|0.1976016791882729|2.81|468.0|117|2|sense	49.536043120802724	0.308405419312776	3				NaN	NaN	0	NaN	5003	4061	9060
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9067	28.199	NaN	901.1	30	0	77.72	0.034	+			3040	ASFGIRRE	8	50	468.2558239006037	934.4970948680074	2	468.2545471191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASFGIRRE_	ENSG00000198089|ENST00000400288|SFI1;ENST00000382162.7_1_22:31904270-32000328:+|nuORF;ENST00000465646.5_1_22:31904270-31924850:+|nuORF;nc|ENSG00000198089|A8K8P3-2|SFI1;nc|ENSG00000198089|A8K8P3-5|SFI1;nc|ENSG00000198089|A8K8P3-9|SFI1	31.529811441608018	0.715883593221515	3				NaN	NaN	0	NaN	5004	4061	9060
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9074	28.216	NaN	6547.1	30	0	3501.3	0.214			+	43501	TGRRWTPL	8	58	493.779932050271	985.545311167342	2	493.7793273925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TGRRWTPL_	REV__ENSG00000165509|ENST00000298296|MAGEC3;REV__MAGEC3|p.E168Rfs*45|1|0.33|ENSG00000165509|chrX:141879413-141879413|G/-|frameshift_variant	30.503639358989545	0.7238069182250283	3				NaN	NaN	0	NaN	5008	4064	9073
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9075	28.219	NaN	7346.7	30	0	1108.5	0.106	+			38801	SSMTAVLQK	9	59	482.7606364749811	963.5067200167622	2	482.7597961425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSMTAVLQK_	ENST00000470658.1_1_21:44293721-44296875:-|nuORF	132.757866228626	0.013877640931359021	3				NaN	NaN	0	NaN	5009	4064	9073
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9076	28.221	NaN	1660.5	30	0	213.42	0.106			+	2153	ALLHGGAL	8	42	376.2271493106174	750.4397456880348	2	376.2266540527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ALLHGGAL_	REV__tr|U7T676|U7T676_FUSNUGlutaminaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=glsAPE=3SV=1	43.626045697637714	0.6338121648150432	3				NaN	NaN	0	NaN	5010	4064	9073
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9077	28.223	NaN	2503.4	30	0	203.01	0.106			+	-1	CPGELKEVK	9	58	530.2792026559898	1058.5438523787795	2	530.2785034179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_C(Carbamidomethyl (C))PGELKEVK_	REV__ENSG00000083544|ENST00000377881|TDRD3;REV__ENST00000463109.2_1_13:61018822-61034675:+|nuORF;REV__TDRD3|p.R406Kfs*3|1|0.3|ENSG00000083544|chr13:60528713-60528714|-/A|frameshift_variant	56.72105179125745	0.24094814563026265	3				NaN	NaN	0	NaN	5011	4064	9073
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9078	28.225	NaN	1558.4	30	0	275.88	0.106			+	3091	ASGGAPSAPL	10	49	414.2168961167396	826.4192393002792	2	414.2164611816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASGGAPSAPL_	REV__ENSG00000165138|ENST00000353234|ANKS6;REV__nc|ENSG00000165138|Q68DC2-4|ANKS6	54.776311868738084	0.41334902933431344	3				NaN	NaN	0	NaN	5012	4064	9073
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9079	28.227	NaN	1419.6	30	0	144.39	0.106				-1	MLAATCNKI	9	53	511.2614523767393	1020.5083518202787	2	511.25982666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_MLAATC(Carbamidomethyl (C))NKI_	ENSG00000164651|ENST00000418710|SP8;ENSG00000217236|ENST00000394967|SP9;nc|ENSG00000164651|Q8IXZ3-1|SP8;nc|ENSG00000164651|Q8IXZ3-2|SP8;nc|ENSG00000164651|Q8IXZ3|SP8;SP8|p.E482Sfs*8|1|0.36|ENSG00000164651|chr7:20784320-20784320|G/-|frameshift_variant	51.33545320467046	0.2872990594074956	3				NaN	NaN	0	NaN	5013	4064	9073
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9080	28.228	NaN	1579.7	30	0	246.26	0.033	+			36433	SEVAMHSL	8	51	437.21048982232793	872.4064267114559	2	437.21038818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SEVAMHSL_	ENSG00000100290|ENST00000216115|BIK	53.351449002276354	0.5676011784961348	3				NaN	NaN	0	NaN	5014	4064	9073
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9086	28.244	NaN	5655.9	30	0	595.96	0.214	+			36058	SEITTKDL	8	65	453.7429094930065	905.471266052813	2	453.7424011230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEITTKDL_	ENSG00000187514|ENST00000409115|PTMA;ENST00000468027.5_1_2:232573416-232577283:+|nuORF;nc|ENSG00000187514|P06454|PTMA	95.81516180277367	0.2598660847282228	3				NaN	NaN	0	NaN	5017	4067	9085
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9087	28.248	NaN	1859.4	30	0	238.98	0.106			+	-1	KTSGSSVMVL	10	63	512.7699125468546	1023.5252721605092	2	512.77001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_KTSGSSVM(Oxidation (M))VL_	REV__ENSG00000143375|ENST00000271636|CGN;REV__nc|ENSG00000143375|Q9P2M7-2|CGN	47.95952297671804	0.47580206326914537	3				NaN	NaN	0	NaN	5018	4067	9085
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9088	28.25	NaN	3353.8	30	0	491.88	0.106	+			46101	VDDKREGVI	9	61	515.7798192915731	NaN	0	515.780029296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VDDKREGVI_	ENSG00000102452|ENST00000251127|NALCN	56.72105179125745	0.16330365735109603	3				NaN	NaN	0	NaN	5019	4067	9085
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9089	28.252	NaN	3860	30	0	330.39	0.106	+			28699	NNEKLEGDAA	10	61	530.7498801628619	1059.4852073925238	2	530.749755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NNEKLEGDAA_	ENST00000379452.3_1_3:32795167-32795302:+|nuORF	41.42661286455405	0.5359995577334734	3				NaN	NaN	0	NaN	5020	4067	9085
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9090	28.254	NaN	1375.4	30	0	92.496	0.106			+	44207	TRGVSLLN	8	47	430.25369099576494	858.4928290583299	2	430.2532043457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TRGVSLLN_	REV__ENSG00000069020|ENST00000403625|MAST4;REV__nc|ENSG00000069020|O15021-2|MAST4;REV__nc|ENSG00000069020|O15021-3|MAST4;REV__nc|ENSG00000069020|O15021-6|MAST4	60.11826168202944	0.5006107059937851	3				NaN	NaN	0	NaN	5021	4067	9085
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9091	28.255	NaN	1483	30	0	199.44	0.106	+			19564	KCQKSGHQAK	10	56	557.7928526393496	1113.571152345499	2	557.7927856445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KCQKSGHQAK_	HERVH-int_dup3527|chrX:4542813-4545870:-|8.094520876636611|0.0139942278604804|9.18|476.0|40|2|sense	41.42661286455405	0.5359995577334734	3				NaN	NaN	0	NaN	5022	4067	9085
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9092	28.257	NaN	2577.4	30	0	1535	0.039				-1	QQILFYCPR	9	39	408.8783862520034	1223.6133293562102	3	408.878173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_QQILFYC(Carbamidomethyl (C))PR_	ENST00000280904.10_2_18:28671106-28672218:-|nuORF	19.996771675451527	0.6112419832031292	3				NaN	NaN	0	NaN	5023	4067	9085
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9100	28.275	NaN	25686	30	0	2818.4	0.214	+			3796	ATAGIIGVNR	10	73	486.2852848858801	970.5560168385603	2	486.2849426269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATAGIIGVNR_	CLTC-CEP95|1|fusion;CLTC|p.A1374*|1|0.05|ENSG00000141367|chr17:59683464-59683465|-/TA|frameshift_variant;CLTC|p.D632Yfs*7|1|0.15|ENSG00000141367|chr17:59666589-59666590|-/TTACA|frameshift_variant;ENSG00000141367|ENST00000269122|CLTC;ENST00000472129.3_1_17:57725612-57733400:+|nuORF;nc|ENSG00000141367|Q00610-2|CLTC	120.8684288430529	0.026103207050128037	3				NaN	NaN	0	NaN	5028	4070	9099
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9101	28.279	NaN	5825.2	30	0	552	0.106	+			8421	EAQPIVTKY	9	71	524.7877899332497	1047.5610269332992	2	524.7879638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EAQPIVTKY_	ENSG00000214753|ENST00000301785|HNRNPUL2	138.06239232086	0.011389075116295402	3				NaN	NaN	0	NaN	5029	4070	9099
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9102	28.281	NaN	4990.5	30	0	424.72	0.106	+			43038	TELAMRQSV	9	72	517.7689209524916	1033.5232889717831	2	517.769287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TELAMRQSV_	CON__P05784;ENSG00000111057|ENST00000388835|KRT18;ENST00000396959.2_1_3:12829511-12830132:-|nuORF;ENST00000424695.1_1_1:238654935-238655424:+|nuORF;ENST00000427733.1_1_13:90882929-90883235:+|nuORF;ENST00000549078.5_1_12:53344429-53346127:+|nuORF	123.20810148215591	0.019257656778428764	3				NaN	NaN	0	NaN	5030	4070	9099
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9103	28.283	NaN	4723.5	30	0	425.02	0.106	+			33078	REKLQEEML	9	73	588.3089089440035	1174.603264954807	2	588.3082885742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_REKLQEEML_	ENSG00000026025|ENST00000544301|VIM;ENST00000485947.1_1_10:17271421-17272784:+|nuORF	78.26377905018397	0.10505600812668463	3				NaN	NaN	0	NaN	5031	4070	9099
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9104	28.285	NaN	1075.4	30	0	74.728	0.106			+	10644	EYPGDDLHAL	10	60	565.2621459960938	NaN	0	565.2621459960938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EYPGDDLHAL_	REV__nc|ENSG00000135424|Q13683-10|ITGA7;REV__nc|ENSG00000135424|Q13683-13|ITGA7;REV__nc|ENSG00000135424|Q13683-3|ITGA7;REV__nc|ENSG00000135424|Q13683-9|ITGA7;REV__nc|ENSG00000135424|Q13683|ITGA7	63.30626980617807	0.2072786894693966	3				NaN	NaN	0	NaN	5032	4070	9099
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9105	28.286	NaN	1670.7	30	0	227.4	0.038			+	-1	LVACIHSVCTN	11	52	608.7963469422867	NaN	0	608.796630859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_LVAC(Carbamidomethyl (C))IHSVCTN_	REV__ENSG00000176893|ENST00000641926|OR51G2;REV__ENSG00000176895|ENST00000641490|OR51A7;REV__ENSG00000278870|ENST00000623849|OR51G1	30.317721548370564	0.4303027717346894	3				NaN	NaN	0	NaN	5033	4070	9099
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9106	28.287	NaN	1215.9	30	0	97.266	0.142				-1	WVTQMNHIV	9	50	572.286735178762	NaN	0	572.2868041992188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_WVTQM(Oxidation (M))NHIV_	ENSG00000134824|ENST00000278840|FADS2;ENST00000522359.2_1_11:61630757-61632750:+|nuORF;nc|ENSG00000134824|O95864-2|FADS2;nc|ENSG00000134824|O95864-3|FADS2;nc|ENSG00000134824|O95864-4|FADS2	21.9598887501803	0.3626577482100488	3				NaN	NaN	0	NaN	5034	4070	9099
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9113	28.305	NaN	1540.9	30	0	588.89	0.214			+	49460	VVWKIPFP	8	43	329.20128705038985	NaN	0	329.2011413574219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVWKIPFP_	REV__ENST00000573951.1_1_16:3313772-3314576:+|nuORF	19.359975847455235	1.7418937515398478	3				NaN	NaN	0	NaN	5038	4073	9112
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9114	28.309	NaN	2489.2	30	0	1132.8	0.106			+	13447	GLIFGWIRL	9	39	358.8856461879284	1073.6351091639851	3	358.8851013183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GLIFGWIRL_	REV__ENSG00000109182|ENST00000226432|CWH43	44.116797842482775	0.37197099687881774	3				NaN	NaN	0	NaN	5039	4073	9112
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9115	28.311	NaN	1349.4	30	0	132.23	0.106			+	36580	SFSYLFLK	8	58	502.7745684733581	1003.5345840135162	2	502.7756652832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SFSYLFLK_	REV__ENSG00000132952|ENST00000255304|USPL1;REV__nc|ENSG00000132952|Q5W0Q7-2|USPL1	53.351449002276354	0.5676011784961348	3				NaN	NaN	0	NaN	5040	4073	9112
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9116	28.312	NaN	1709.8	30	0	182.66	0.106			+	-1	MLPLCAGNVL	10	57	552.2835941196711	1102.552635306142	2	552.2825927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))LPLC(Carbamidomethyl (C))AGNVL_	REV__ABCB5|p.N188Tfs*14|1|0.11|ENSG00000004846|chr7:20643514-20643514|A/-|frameshift_variant;REV__ENSG00000004846|ENST00000404938|ABCB5	35.61828744233558	0.588957954432594	3				NaN	NaN	0	NaN	5041	4073	9112
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9117	28.314	NaN	2751.8	30	0	238.8	0.036			+	18956	IVQGMFDTY	9	71	537.2506035917066	1072.4866542502132	2	537.2489013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IVQGMFDTY_	REV__ENSG00000022567|ENST00000517878|SLC45A4;REV__nc|ENSG00000022567|Q5BKX6-2|SLC45A4;REV__nc|ENSG00000022567|Q5BKX6-3|SLC45A4;REV__nc|ENSG00000022567|Q5BKX6|SLC45A4;REV__SLC45A4|p.K543Rfs*46|1|0.44|ENSG00000022567|chr8:141218014-141218014|G/-|frameshift_variant	49.44154591367651	0.3095138337212152	3				NaN	NaN	0	NaN	5042	4073	9112
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9123	28.33	NaN	4445.6	30	0	598.45	0.214	+			3256	ASLGLKFNK	9	62	489.293478157984	976.572403382768	2	489.2928466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASLGLKFNK_	ENSG00000247077|ENST00000498926|PGAM5;nc|ENSG00000247077|Q96HS1-2|PGAM5	56.72105179125745	0.24094814563026265	3				NaN	NaN	0	NaN	5045	4076	9122
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9124	28.334	NaN	4217.6	30	0	2627.6	0.106	+			49489	VVYTSHLQLK	10	39	396.56441661153	NaN	0	396.5643005371094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVYTSHLQLK_	ENSG00000015568|ENST00000016946|RGPD5;ENSG00000153165|ENST00000409886|RGPD3;ENSG00000153201|ENST00000283195|RANBP2;ENSG00000169629|ENST00000302558|RGPD8;ENSG00000183054|ENST00000329516|RGPD6;ENSG00000185304|ENST00000398146|RGPD2;ENSG00000187627|ENST00000641458|RGPD1;ENSG00000196862|ENST00000408999|RGPD4;ENST00000522286.5_1_2:113158797-113161561:-|nuORF;nc|ENSG00000183054|Q99666-2|RGPD5;nc|ENSG00000187627|P0DJD0|RGPD1;RANBP2|p.A864Lfs*3|1|0.3|ENSG00000153201|chr2:108758533-108758533|G/-|frameshift_variant;RANBP2|p.C2737Vfs*35|1|0.18|ENSG00000153201|chr2:108772957-108772957|T/-|frameshift_variant;RANBP2|p.F3068Lfs*10|1|0.06|ENSG00000153201|chr2:108782692-108782692|T/-|frameshift_variant;RANBP2|p.H3114Sfs*18|1|0.33|ENSG00000153201|chr2:108782827-108782828|-/T|frameshift_variant;RANBP2|p.K1989Nfs*9|1|0.05|ENSG00000153201|chr2:108766505-108766506|-/TATCCTG|frameshift_variant;RANBP2|p.K2576Nfs*63|2|0.22|ENSG00000153201|chr2:108768262-108768262|A/-|frameshift_variant;RANBP2|p.S1486Rfs*51|1|0.05|ENSG00000153201|chr2:108764996-108764997|-/ATTTTGTATTC|frameshift_variant;RGPD2|p.F1350Lfs*25|1|0.25|ENSG00000185304|chr2:87782974-87782974|A/-|frameshift_variant;RGPD3|p.V1441*|1|0.45|ENSG00000153165|chr2:106423647-106423647|T/-|frameshift_variant;RGPD4|p.K568Nfs*33|1|0.14|ENSG00000196862|chr2:107859787-107859787|A/-|frameshift_variant	27.047317107675042	0.41136583337917604	3				NaN	NaN	0	NaN	5046	4076	9122
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9125	28.336	NaN	1994.8	30	0	516.58	0.106	+			144	AAGTTASLIK	10	54	466.77471305380163	931.5348731744033	2	466.7743225097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AAGTTASLIK_	ENSG00000187140|ENST00000371116|FOXD3	54.776311868738084	0.41334902933431344	3				NaN	NaN	0	NaN	5047	4076	9122
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9126	28.338	NaN	3163.9	30	0	925.05	0.106	+			7298	DASGAKLDY	9	53	470.2255676399754	938.4365823467508	2	470.2245178222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DASGAKLDY_	BZW1|p.N285Tfs*11|2|0.26|ENSG00000082153|chr2:200818782-200818782|A/-|frameshift_variant;BZW1|p.N286*|1|0.04|ENSG00000082153|chr2:200818790-200818791|-/T|frameshift_variant;BZW1|p.S325Rfs*19|1|0.04|ENSG00000082153|chr2:200819989-200819990|-/ACAATATAGAA|frameshift_variant;ENSG00000082153|ENST00000409600|BZW1;ENST00000464483.1_1_2:201677931-201680272:+|nuORF;nc|ENSG00000082153|Q7L1Q6-2|BZW1;nc|ENSG00000082153|Q7L1Q6-3|BZW1;nc|ENSG00000082153|Q7L1Q6-4|BZW1	88.17693792209575	0.07000514020414955	3				NaN	NaN	0	NaN	5048	4076	9122
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9127	28.339	NaN	3287.6	30	0	482.04	0.106			+	46094	VDAPVLGFRV	10	72	536.8107753986025	1071.6069978640048	2	536.8093872070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VDAPVLGFRV_	REV__ENSG00000185915|ENST00000379499|KLHL34;REV__KLHL34|p.R288Afs*7|3|0.44|ENSG00000185915|chrX:21656928-21656928|C/-|frameshift_variant	37.81151784470057	0.569310847604193	3				NaN	NaN	0	NaN	5049	4076	9122
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9128	28.341	NaN	3449.7	30	0	514.18	0.106			+	37243	SKTHILEW	8	62	507.2733885632006	1012.5322241932013	2	507.77288818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SKTHILEW_	REV__ENSG00000146426|ENST00000682666|TIAM2;REV__nc|ENSG00000146426|Q8IVF5-2|TIAM2;REV__nc|ENSG00000146426|Q8IVF5-3|TIAM2;REV__nc|ENSG00000146426|Q8IVF5-4|TIAM2;REV__nc|ENSG00000146426|Q8IVF5-5|TIAM2	31.954861631926434	0.7126016770032289	3				NaN	NaN	0	NaN	5050	4076	9122
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9129	28.343	NaN	1513.3	30	0	609.54	0.034			+	23671	LASKMAFR	8	52	462.25980844608944	NaN	0	462.26025390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LASKMAFR_	REV__ENST00000382874.6_1_13:20579374-20580544:+|nuORF	37.15910966729921	1.7418937515398478	3				NaN	NaN	0	NaN	5051	4076	9122
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9134	28.357	NaN	175170	30	0	30198	0.149	+			12305	GDAGLGKLIK	10	86	486.2985934601132	970.5826339870264	2	486.2978820800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GDAGLGKLIK_	ENSG00000163565|ENST00000295809|IFI16;ENST00000493884.5_1_1:158984458-159022017:+|nuORF;IFI16|p.I227Nfs*42|1|0.46|ENSG00000163565|chr1:159018351-159018352|-/A|frameshift_variant;nc|ENSG00000163565|Q16666-2|IFI16;nc|ENSG00000163565|Q16666-3|IFI16;nc|ENSG00000163565|Q16666-6|IFI16	167.22876102047192	0.004566578872041589	3				NaN	NaN	0	NaN	5053	4079	9133
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9135	28.36	NaN	7228.3	30	0	1114.2	0.106	+			49204	VVMVNQGLTK	10	74	544.8110019357588	1087.6074509383175	2	544.8115844726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVMVNQGLTK_	ENSG00000134057|ENST00000256442|CCNB1	156.16072019525166	0.007401655565974521	3				NaN	NaN	0	NaN	5054	4079	9133
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9136	28.362	NaN	6839.5	30	0	664.2	0.106	+			47037	VLEEMEAR	8	78	488.74119401351487	975.4678350938298	2	488.74090576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VLEEMEAR_	ENSG00000104863|ENST00000221459|LIN7B;ENSG00000111052|ENST00000552864|LIN7A;ENST00000469137.5_1_19:49617849-49621627:+|nuORF;ENST00000474252.1_1_19:49618516-49621276:+|nuORF;LIN7A|p.K191N|1|0.12|ENSG00000111052|chr12:80811594-80811594|T/G|missense_variant;nc|ENSG00000104863|Q9HAP6-2|LIN7B	63.30626980617807	0.4690498839812213	3				NaN	NaN	0	NaN	5055	4079	9133
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9137	28.364	NaN	3491.9	30	0	971.83	0.106				-1	 	0	37	326.5311799822957	976.5717105470872	3	326.53094482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5056	4079	9133
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9138	28.365	NaN	3376.7	30	0	415.29	0.106				-1	 	0	56	404.2280916043336	806.4416302754672	2	404.2274475097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5057	4079	9133
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9139	28.367	NaN	2623.6	30	0	1057.5	0.106	+			37609	SLPSRAAAL	9	47	443.26195948211387	884.5093660310278	2	443.2613830566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLPSRAAAL_	ENSG00000105397|ENST00000525621|TYK2	49.536043120802724	0.308405419312776	3				NaN	NaN	0	NaN	5058	4079	9133
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9140	28.369	NaN	2523.8	30	0	118.64	0.034	+			17287	IADAAYKAM	9	65	477.2424421612745	952.470331389349	2	477.24169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IADAAYKAM_	ENSG00000176658|ENST00000318217|MYO1D	82.24051045832904	0.08786059719216216	3				NaN	NaN	0	NaN	5059	4079	9133
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9141	28.37	NaN	1903.3	30	0	258.48	0.139	+			31318	QIMPKKDP	8	61	478.7661016391503	955.5176503451006	2	479.2670593261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_QIMPKKDP_	ENSG00000101898|ENST00000394552|MCTS2;ENSG00000232119|ENST00000371317|MCTS1;ENST00000479096.1_1_20:30135258-30136578:+|nuORF;ENST00000487133.1_1_X:119739298-119742228:+|nuORF;MCTS1|p.F71Lfs*12|1|0.37|ENSG00000232119|chrX:120606122-120606122|T/-|frameshift_variant;nc|ENSG00000232119|Q9ULC4-2|MCTS1;nc|ENSG00000232119|Q9ULC4-3|MCTS1	42.47446043378293	0.6409579893742323	3				NaN	NaN	0	NaN	5060	4079	9133
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9149	28.389	NaN	10246	30	0	1605.3	0.214	+			5700	AVFDGAQVTSK	11	73	561.7942126319405	1121.5738723306808	2	561.79443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVFDGAQVTSK_	ENSG00000175274|ENST00000525680|TP53I11	97.59673978297657	0.06767575942783079	3				NaN	NaN	0	NaN	5065	4082	9148
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9150	28.393	NaN	10716	30	0	6173	0.106				-1	 	0	47	357.1983445129126	1068.5732041389379	3	357.1979064941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5066	4082	9148
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9151	28.395	NaN	4096	30	0	291.44	0.106			+	-1	PTACGQGVKL	10	63	515.7717936423653	NaN	0	515.7723999023438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_PTAC(Carbamidomethyl (C))GQGVKL_	REV__ENST00000295112.13_1_2:55509501-55511570:+|nuORF;REV__nc|ENSG00000293422|A6NEY8|PRORSD1P	46.45678178249821	0.32800322091223805	3				NaN	NaN	0	NaN	5067	4082	9148
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9152	28.397	NaN	2801	30	0	280.76	0.106	+			45524	TYHPPGQTF	9	63	524.2484025552328	1046.4822521772655	2	524.2496337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TYHPPGQTF_	FCGBP-ACSS2|1|fusion;nc|ENSG00000275395|Q9Y6R7|FCGBP	69.6276240434122	0.14239879520340665	3				NaN	NaN	0	NaN	5068	4082	9148
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9153	28.399	NaN	4071.4	30	0	419.72	0.106			+	7046	CSYQGALSR	9	59	492.73308930084454	983.4516256684891	2	492.73223876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_CSYQGALSR_	REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-13|TTN;REV__nc|ENSG00000155657|Q8WZ42-2|TTN;REV__nc|ENSG00000155657|Q8WZ42-4|TTN;REV__nc|ENSG00000155657|Q8WZ42-5|TTN;REV__nc|ENSG00000155657|Q8WZ42-7|TTN;REV__nc|ENSG00000155657|Q8WZ42-8|TTN;REV__nc|ENSG00000155657|Q8WZ42|TTN;REV__TTN|p.A12650Gfs*4|1|0.4|ENSG00000155657|chr2:178633489-178633490|-/T|frameshift_variant;REV__TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;REV__TTN|p.D20259Rfs*40|1|0.44|ENSG00000155657|chr2:178583105-178583106|-/T|frameshift_variant;REV__TTN|p.D21555Ifs*6|1|0.33|ENSG00000155657|chr2:178576659-178576659|G/-|frameshift_variant;REV__TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;REV__TTN|p.E15132Sfs*22|1|0.27|ENSG00000155657|chr2:178612094-178612094|C/-|frameshift_variant;REV__TTN|p.E20392Dfs*6|1|0.04|ENSG00000155657|chr2:178582357-178582358|-/TTTAAAATTA|frameshift_variant;REV__TTN|p.E20392Kfs*4|1|0.02|ENSG00000155657|chr2:178582359-178582360|-/TTTT|frameshift_variant;REV__TTN|p.E9224Gfs*8|1|0.04|ENSG00000155657|chr2:178709697-178709698|-/TCTTATGATATCTTGAC|frameshift_variant;REV__TTN|p.F18705Lfs*8|1|0.37|ENSG00000155657|chr2:178590687-178590687|A/-|frameshift_variant;REV__TTN|p.G12742Vfs*2|1|0.05|ENSG00000155657|chr2:178632983-178632983|C/-|frameshift_variant;REV__TTN|p.G14712Dfs*11|1|0.37|ENSG00000155657|chr2:178614341-178614341|G/-|frameshift_variant;REV__TTN|p.G19920Afs*12|1|0.42|ENSG00000155657|chr2:178584961-178584961|G/-|frameshift_variant;REV__TTN|p.G22029Efs*22|2|0.13|ENSG00000155657|chr2:178575125-178575125|T/-|frameshift_variant;REV__TTN|p.I10495Nfs*4|1|0.37|ENSG00000155657|chr2:178685288-178685289|-/T|frameshift_variant;REV__TTN|p.I24998Nfs*2|1|0.35|ENSG00000155657|chr2:178566216-178566217|-/T|frameshift_variant;REV__TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;REV__TTN|p.I9225Cfs*34|1|0.06|ENSG00000155657|chr2:178709695-178709696|-/ATATCCATGAGCA|frameshift_variant;REV__TTN|p.K10923Rfs*104|2|0.23|ENSG00000155657|chr2:178679362-178679362|T/-|frameshift_variant;REV__TTN|p.K11381Nfs*25|1|0.07|ENSG00000155657|chr2:178671133-178671133|T/-|frameshift_variant;REV__TTN|p.K11556Sfs*15|1|0.39|ENSG00000155657|chr2:178652287-178652287|T/-|frameshift_variant;REV__TTN|p.K14271Qfs*5|1|0.02|ENSG00000155657|chr2:178617351-178617352|-/G|frameshift_variant;REV__TTN|p.K26626Nfs*34|1|0.34|ENSG00000155657|chr2:178561331-178561331|T/-|frameshift_variant;REV__TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;REV__TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;REV__TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant;REV__TTN|p.N13487Tfs*49|1|0.34|ENSG00000155657|chr2:178621335-178621335|T/-|frameshift_variant;REV__TTN|p.N15496Ifs*16|1|0.09|ENSG00000155657|chr2:178610116-178610116|T/-|frameshift_variant;REV__TTN|p.P16126Rfs*3|1|0.25|ENSG00000155657|chr2:178607301-178607302|TG/-|frameshift_variant;REV__TTN|p.P22810Hfs*10|1|0.03|ENSG00000155657|chr2:178572780-178572781|-/AAAT|frameshift_variant;REV__TTN|p.V10632Yfs*16|1|0.16|ENSG00000155657|chr2:178683254-178683254|T/-|frameshift_variant;REV__TTN|p.V11008Sfs*13|1|0.33|ENSG00000155657|chr2:178678146-178678147|-/T|frameshift_variant;REV__TTN|p.V11345Ffs*4|1|0.4|ENSG00000155657|chr2:178672044-178672044|T/-|frameshift_variant;REV__TTN|p.V13823*|1|0.28|ENSG00000155657|chr2:178620027-178620027|C/-|frameshift_variant;REV__TTN|p.V22573Cfs*4|2|0.31|ENSG00000155657|chr2:178573492-178573492|C/-|frameshift_variant;REV__TTN|p.V27442Cfs*4|1|0.05|ENSG00000155657|chr2:178558107-178558108|-/A|frameshift_variant	75.04331003522576	0.118981335847003	3				NaN	NaN	0	NaN	5069	4082	9148
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9154	28.4	NaN	1707.2	30	0	325.8	0.106	+			33977	RSFGQFGI	8	56	456.241879606677	910.469206280154	2	456.743896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RSFGQFGI_	tr|U7SPS2|U7SPS2_FUSNUAntifreezeproteintypeIOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01880PE=4SV=1	34.172542307311794	0.6954784234644539	3				NaN	NaN	0	NaN	5070	4082	9148
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9155	28.402	NaN	1250.6	30	0	186.09	0.038			+	-1	LYKKLCCKI	9	33	390.22344970703125	NaN	0	390.22344970703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_LYKKLC(Carbamidomethyl (C))CKI_	REV__GJB7|p.Q212K|1|0.22|ENSG00000164411|chr6:87284279-87284279|G/T|missense_variant	19.1035232394073	0.3723251548669699	3				NaN	NaN	0	NaN	5071	4082	9148
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9160	28.416	NaN	3310.3	30	0	322.12	0.215				-1	VTVSTPLCK	9	65	502.7745684733581	1003.5345840135162	2	503.2740783691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_VTVSTPLC(Carbamidomethyl (C))K_	ENST00000537239.2_1_9:37588826-37588874:-|nuORF	64.20726635412375	0.17854274437659667	3				NaN	NaN	0	NaN	5073	4085	9159
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9161	28.42	NaN	2290.1	30	0	275.97	0.106			+	-1	SAPQLEPVPN	10	67	547.2810805084355	1092.5476080836709	2	547.2848510742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SAPQLEPVPN_	REV__EFHC2|p.K702N|1|0.2|ENSG00000183690|chrX:44163964-44163964|C/A|missense_variant;REV__ENSG00000183690|ENST00000420999|EFHC2;REV__ENST00000343571.3_1_X:44008043-44084947:-|nuORF;REV__nc|ENSG00000183690|Q5JST6-2|EFHC2	38.753607047826485	0.5606299674732264	3				NaN	NaN	0	NaN	5074	4085	9159
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9162	28.422	NaN	1649.4	30	0	517.38	0.106			+	10096	ESLILKPHA	9	31	336.5342361007713	NaN	0	336.53399658203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ESLILKPHA_	REV__ENSG00000164010|ENST00000372517|ERMAP	17.364965105453717	0.37820932774828947	3				NaN	NaN	0	NaN	5075	4085	9159
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9163	28.424	NaN	1936.2	30	0	273.81	0.034			+	26148	LSQGTKPDI	9	61	479.76593017578125	NaN	0	479.76593017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSQGTKPDI_	REV__tr|U7SLP8|U7SLP8_FUSNUV-typeATPsynthasealphachainOS=FusobacteriumnucleatumCTI-5OX=1316586GN=atpAPE=3SV=1	33.921630207806714	0.3063038642147651	3				NaN	NaN	0	NaN	5076	4085	9159
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9172	28.443	NaN	4850.3	30	0	278.25	0.214			+	47710	VSFIHSPPF	9	75	515.7717936423653	NaN	0	515.772216796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSFIHSPPF_	REV__ENSG00000105639|ENST00000458235|JAK3;REV__ENST00000526008.5_1_19:17949989-17958765:-|nuORF;REV__ENST00000527031.5_1_19:17947866-17955268:-|nuORF;REV__nc|ENSG00000105639|P52333-2|JAK3;REV__nc|ENSG00000105639|P52333-4|JAK3	37.15910966729921	0.2899585034171616	3				NaN	NaN	0	NaN	5082	4088	9171
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9173	28.447	NaN	2557.9	30	0	740.95	0.106			+	24572	LGNLISTIE	9	60	480.2751813554537	958.5358097777074	2	480.2743225097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LGNLISTIE_	REV__ARID4B|p.T939Rfs*2|2|0.22|ENSG00000054267|chr1:235182104-235182104|T/-|frameshift_variant;REV__ENSG00000054267|ENST00000264183|ARID4B;REV__ENST00000491632.5_1_1:235341091-235490234:-|nuORF;REV__nc|ENSG00000054267|Q4LE39-2|ARID4B;REV__nc|ENSG00000054267|Q4LE39-3|ARID4B;REV__nc|ENSG00000054267|Q4LE39-4|ARID4B	76.7741389293348	0.11149722112137898	3				NaN	NaN	0	NaN	5083	4088	9171
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9174	28.449	NaN	2057	30	0	274.84	0.106			+	37187	SIYTHFAL	8	51	476.2492880478566	950.4840231625133	2	476.2486572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SIYTHFAL_	REV__ENSG00000155158|ENST00000512701|TTC39B;REV__ENST00000505732.5_1_9:15186859-15307321:-|nuORF;REV__nc|ENSG00000155158|Q5VTQ0-2|TTC39B;REV__nc|ENSG00000155158|Q5VTQ0-3|TTC39B;REV__nc|ENSG00000155158|Q5VTQ0-4|TTC39B;REV__nc|ENSG00000155158|Q5VTQ0-5|TTC39B;REV__nc|ENSG00000155158|Q5VTQ0-6|TTC39B;REV__nc|ENSG00000155158|Q5VTQ0|TTC39B	50.0245360154114	0.5941082100236891	3				NaN	NaN	0	NaN	5084	4088	9171
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9175	28.451	NaN	2575.2	30	0	162.17	0.106	+			38132	SQAAAEGVSEL	11	65	531.2606189694897	1060.5066850057792	2	531.260498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SQAAAEGVSEL_	ENSG00000178764|ENST00000314393|ZHX2	106.68306549817024	0.04687082315084998	3				NaN	NaN	0	NaN	5085	4088	9171
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9176	28.453	NaN	1460.7	30	0	273.84	0.106			+	17755	IEQGTPFTMFY	11	50	445.20689093413847	NaN	0	445.2066345214844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IEQGTPFTMFY_	REV__tr|U7SRD4|U7SRD4_FUSNUSSSfamilysolute:Na+symporterOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01559PE=3SV=1	33.03940026070387	0.41817340257782254	3				NaN	NaN	0	NaN	5086	4088	9171
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9177	28.454	NaN	2602.8	30	0	248.72	0.106	+			2024	AKNPVPQL	8	55	433.7589295294613	865.5033061257226	2	433.75830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AKNPVPQL_	ENSG00000255529|ENST00000299638|POLR2M;ENST00000484300.1_1_15:57976864-58006874:+|nuORF;ENST00000494490.1_3_15:57999305-58006874:+|nuORF;nc|ENSG00000255529|P0CAP2-2|POLR2M;nc|ENSG00000255529|P0CAP2-3|POLR2M	52.29916861842294	0.578018602984656	3				NaN	NaN	0	NaN	5087	4088	9171
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9178	28.456	NaN	998.88	30	0	305.63	0.035			+	-1	GSPRRCVR	8	38	329.8468195166229	986.5186291500686	3	329.8465881347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_GSPRRC(Carbamidomethyl (C))VR_	REV__ENST00000308497.8_1_4:184827389-184827656:+|nuORF	31.954861631926434	0.7126016770032289	3				NaN	NaN	0	NaN	5088	4088	9171
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9187	28.476	NaN	8882.6	30	0	813.56	0.214			+	-1	RIATVWCT	8	70	503.7626829444982	1005.5108129557964	2	503.7637023925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_RIATVWC(Carbamidomethyl (C))T_	REV__ENSG00000115290|ENST00000263915|GRB14;REV__GRB14|p.E402Rfs*18|1|0.29|ENSG00000115290|chr2:164497391-164497392|-/T|frameshift_variant;REV__nc|ENSG00000115290|Q14449-2|GRB14	51.33545320467046	0.5859736979383976	3				NaN	NaN	0	NaN	5094	4091	9186
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9188	28.48	NaN	3561	30	0	848.29	0.106	+			4616	ATLNSIVAK	9	59	458.77717656328275	915.5398001933655	2	458.7774963378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATLNSIVAK_	ENSG00000007944|ENST00000356840|MYLIP;MYLIP|p.K199Rfs*26|1|0.07|ENSG00000007944|chr6:16143150-16143151|-/GAATT|frameshift_variant;MYLIP|p.R317Kfs*8|1|0.09|ENSG00000007944|chr6:16145014-16145015|-/A|frameshift_variant	80.45461616416974	0.09558281504443908	3				NaN	NaN	0	NaN	5095	4091	9186
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9189	28.482	NaN	2248.4	30	0	357.82	0.106	+			3224	ASLADIMAK	9	55	468.2476858394335	934.480818745667	2	468.2474365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_ASLADIM(Oxidation (M))AK_	ENSG00000114391|ENST00000394077|RPL24;ENST00000446071.1_1_9:72832122-72832404:+|nuORF	67.49366992349736	0.1516260258713357	3				NaN	NaN	0	NaN	5096	4091	9186
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9190	28.483	NaN	3294.2	30	0	174.18	0.106	+			4914	ATQLLKLAH	9	63	497.80671326811137	993.5988736030228	2	497.8067626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATQLLKLAH_	ENSG00000148303|ENST00000323345|RPL7A;ENST00000424559.2_1_22:19780074-19780431:+|nuORF;ENST00000434317.1_1_7:102395625-102396051:+|nuORF;ENST00000437848.1_1_1:46117146-46117242:-|nuORF;ENST00000463740.5_1_9:136215098-136217195:+|nuORF;ENST00000468834.1_1_10:33346560-33347304:-|nuORF;ENST00000473054.1_1_14:68805457-68806021:-|nuORF;ENST00000485706.5_1_9:136216467-136216912:+|nuORF;ENST00000486157.1_1_5:78825151-78825526:+|nuORF	51.19269402634007	0.2889735674168909	3				NaN	NaN	0	NaN	5097	4091	9186
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9191	28.485	NaN	5144.9	30	0	1411.2	0.106	+			42760	TDSIVKNIS	9	62	488.7697148265345	975.524876719869	2	488.7703552246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TDSIVKNIS_	BMPR2|p.E672Kfs*28|1|0.3|ENSG00000204217|chr2:202555675-202555675|A/-|frameshift_variant;BMPR2|p.N583Kfs*6|1|0.17|ENSG00000204217|chr2:202555406-202555407|-/A|frameshift_variant;BMPR2|p.N583Tfs*44|12|0.43|ENSG00000204217|chr2:202555407-202555407|A/-|frameshift_variant;ENSG00000204217|ENST00000374580|BMPR2	62.107414245175825	0.1960472003779324	3				NaN	NaN	0	NaN	5098	4091	9186
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9192	28.487	NaN	1187.6	30	0	136.29	0.106			+	-1	VCVSRWMK	8	50	512.7575864514062	1023.5006199696123	2	512.7579956054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_VCVSRWM(Oxidation (M))K_	REV__ENST00000460703.1_1_3:49848630-49848912:-|nuORF	26.79610172149135	0.7524337208463756	3				NaN	NaN	0	NaN	5099	4091	9186
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9193	28.489	NaN	1061.4	30	0	452.48	0.03				-1	 	0	28	343.19918885250013	684.3838247718003	2	343.1995849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5100	4091	9186
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9199	28.503	NaN	7031.5	30	0	685.55	0.214	+			25318	LPAREATQF	9	77	516.7790401564903	1031.5435273797805	2	516.7779541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LPAREATQF_	ENSG00000183087|ENST00000327773|GAS6;ENST00000476291.1_1_13:114550749-114566917:-|nuORF;GAS6|p.G150Afs*49|1|0.17|ENSG00000183087|chr13:113839745-113839745|C/-|frameshift_variant;GAS6|p.N106Kfs*13|1|0.39|ENSG00000183087|chr13:113846552-113846553|-/T|frameshift_variant;GAS6|p.R151Pfs*27|1|0.41|ENSG00000183087|chr13:113839744-113839745|-/C|frameshift_variant;nc|ENSG00000183087|Q14393-1|GAS6	106.68306549817024	0.032382560583716295	3				NaN	NaN	0	NaN	5103	4094	9198
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9200	28.507	NaN	3758.2	30	0	585.02	0.106	+			25472	LPRNEADEL	9	62	528.7706814175427	1055.5268099018854	2	528.77099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LPRNEADEL_	ENSG00000100342|ENST00000397278|APOL1;nc|ENSG00000100342|O14791-2|APOL1;nc|ENSG00000100342|O14791-3|APOL1	68.84614121027924	0.14577793175421136	3				NaN	NaN	0	NaN	5104	4094	9198
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9201	28.509	NaN	3959.8	30	0	689.89	0.106			+	17529	IDNLFLSL	8	65	488.7697148265345	975.524876719869	2	488.7691955566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))IDNLFLSL_	REV__ENSG00000159885|ENST00000391960|ZNF222;REV__ENSG00000186026|ENST00000421176|ZNF284;REV__nc|ENSG00000159885|Q9UK12|ZNF222	64.20726635412375	0.4601301477144759	3				NaN	NaN	0	NaN	5105	4094	9198
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9202	28.51	NaN	2905.2	30	0	288.29	0.106	+			25590	LQHQVSQI	8	65	476.76419834917243	951.5138437651449	2	476.7640686035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LQHQVSQI_	CEP128|p.I749Ffs*9|1|0.42|ENSG00000100629|chr14:80778013-80778013|T/-|frameshift_variant;CEP128|p.K414Nfs*34|2|0.18|ENSG00000100629|chr14:80793078-80793078|T/-|frameshift_variant;ENSG00000100629|ENST00000555265|CEP128;nc|ENSG00000100629|Q6ZU80-1|CEP128;nc|ENSG00000100629|Q6ZU80-3|CEP128	71.87747018426188	0.391254423828572	3				NaN	NaN	0	NaN	5106	4094	9198
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9203	28.512	NaN	3960.6	30	0	1391.4	0.106	+			31000	QESEARIQQL	10	68	601.3128613540046	1200.611169774809	2	601.3134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QESEARIQQL_	ENSG00000100242|ENST00000689035|SUN2;ENST00000469086.5_1_22:39136824-39138467:-|nuORF;ENST00000477262.5_1_22:39135390-39138407:-|nuORF;nc|ENSG00000100242|Q9UH99-2|SUN2;nc|ENSG00000100242|Q9UH99-3|SUN2	127.46168284122857	0.01679120895519865	3				NaN	NaN	0	NaN	5107	4094	9198
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9204	28.514	NaN	1427.7	30	0	127.6	0.106			+	-1	ISQNVAKMCL	10	37	374.85789452345875	NaN	0	374.85797119140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_ISQNVAKM(Oxidation (M))CL_	REV__ENSG00000013573|ENST00000542838|DDX11;REV__ENST00000435753.6_1_12:31250908-31256767:+|nuORF;REV__ENST00000536265.5_1_12:31242773-31256767:+|nuORF;REV__nc|ENSG00000013573|Q96FC9-3|DDX11;REV__nc|ENSG00000013573|Q96FC9-4|DDX11;REV__nc|ENSG00000214826|Q92771|DDX12P;REV__nc|ENSG00000256263|A8MPP1|DDX11L8	29.170058357718403	0.40439580130713204	3				NaN	NaN	0	NaN	5108	4094	9198
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9205	28.516	NaN	2260.8	30	0	225.92	0.037	+			10918	FDKLNLQNI	9	49	368.87452118544365	1103.601734156531	3	368.874267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FDKLNLQNI_	ENSG00000176915|ENST00000357997|ANKLE2;nc|ENSG00000176915|Q86XL3-3|ANKLE2	54.776311868738084	0.25715957988447635	3				NaN	NaN	0	NaN	5109	4094	9198
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9213	28.536	NaN	3927.6	30	0	516.16	0.214	+			47513	VQNFYNPL	8	69	497.75280619864077	993.4910594640816	2	497.75128173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VQNFYNPL_	ENSG00000159261|ENST00000399135|CLDN14	47.91560031466742	0.6071945918984287	3				NaN	NaN	0	NaN	5114	4097	9212
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9214	28.539	NaN	1809.3	30	0	229.2	0.106	+			33694	RPDEKAIMTY	10	64	612.3090751891385	1222.603597445077	2	612.3076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RPDEKAIMTY_	ENSG00000072110|ENST00000394419|ACTN1;ENSG00000130402|ENST00000252699|ACTN4;ENST00000554508.5_1_14:69367621-69387744:-|nuORF;ENST00000588618.5_1_19:39138385-39212431:+|nuORF;nc|ENSG00000072110|P12814-2|ACTN1;nc|ENSG00000072110|P12814-4|ACTN1;nc|ENSG00000072110|P12814|ACTN1	66.96192283764107	0.30252237217063654	3				NaN	NaN	0	NaN	5115	4097	9212
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9215	28.541	NaN	1423.8	30	0	190.27	0.034	+			12303	GDADLVPKL	9	46	464.2612479131578	926.5079428931156	2	464.2605895996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GDADLVPKL_	chr7:900613-904126|469|13.6|0.0|20.38|-|ENST00000649206|ADAP1,COX19;ENSG00000105963|ENST00000265846|ADAP1;ENST00000478000.5_1_7:938560-944975:-|nuORF;nc|ENSG00000105963|O75689-2|ADAP1;nc|ENSG00000105963|O75689-3|ADAP1	44.116797842482775	0.37197099687881774	3				NaN	NaN	0	NaN	5116	4097	9212
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9221	28.557	NaN	4539.1	30	0	1408.5	0.214				-1	LSSYGWTL	8	60	484.7384076460739	967.4622623589478	2	484.7375793457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LSSYGWTL_	ENST00000544098.1_1_11:60699174-60699228:+|nuORF	47.91560031466742	0.6071945918984287	3				NaN	NaN	0	NaN	5119	4100	9220
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9222	28.561	NaN	5619.6	30	0	781.48	0.106	+			731	AEAYLGKTV	9	68	476.26117907678855	NaN	0	476.26104736328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEAYLGKTV_	ENSG00000109971|ENST00000534624|HSPA8;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;ENST00000456928.2_1_12:4206979-4207195:+|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;HSPA8|p.K569Dfs*6|1|0.3|ENSG00000109971|chr11:123058302-123058303|TC/-|frameshift_variant;nc|ENSG00000109971|P11142-2|HSPA8	78.26377905018397	0.07733306720594871	3				NaN	NaN	0	NaN	5120	4100	9220
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9223	28.563	NaN	2102.7	30	0	366.97	0.106	+			20012	KEIKDSSGHT	10	63	551.2807471882312	NaN	0	551.280517578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEIKDSSGHT_	ENSG00000160145|ENST00000682506|KALRN;ENST00000473056.1_1_3:124207140-124210289:+|nuORF;nc|ENSG00000160145|O60229-2|KALRN;nc|ENSG00000160145|O60229|KALRN	54.722347961057174	0.27574710963839943	3				NaN	NaN	0	NaN	5121	4100	9220
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9224	28.564	NaN	2452.8	30	0	322.1	0.106	+			24111	LEKLTAVD	8	55	444.75622902755055	887.4979051219011	2	444.755615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LEKLTAVD_	ENSG00000081913|ENST00000262719|PHLPP1;nc|ENSG00000081913|O60346-2|PHLPP1;PHLPP1|p.N1186Tfs*10|1|0.14|ENSG00000081913|chr18:62963464-62963464|A/-|frameshift_variant;PHLPP1|p.T1236Nfs*38|2|0.39|ENSG00000081913|chr18:62972653-62972654|-/A|frameshift_variant	53.351449002276354	0.5676011784961348	3				NaN	NaN	0	NaN	5122	4100	9220
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9225	28.566	NaN	1939.3	30	0	217.93	0.106			+	-1	LAVKGFMQM	9	57	520.767785667346	1039.5210184014918	2	520.7670288085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_LAVKGFMQM(Oxidation (M))_	REV__ENSG00000102001|ENST00000323022|CACNA1F;REV__nc|ENSG00000102001|O60840-4|CACNA1F;REV__nc|ENSG00000102001|O60840-5|CACNA1F;REV__nc|ENSG00000102001|O60840-6|CACNA1F;REV__nc|ENSG00000102001|O60840-7|CACNA1F;REV__nc|ENSG00000102001|O60840|CACNA1F	40.5726180659479	0.4135428067754104	3				NaN	NaN	0	NaN	5123	4100	9220
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9226	28.568	NaN	1686	30	0	176.06	0.106	+			50479	YAIKDGGLCF	10	64	543.7657470703125	NaN	0	543.7657470703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YAIKDGGLCF_	HHIP|p.R173I|1|0.39|ENSG00000164161|chr4:144658835-144658835|G/T|missense_variant	54.776311868738084	0.27540594196716844	3				NaN	NaN	0	NaN	5124	4100	9220
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9227	28.57	NaN	757.78	30	0	167.04	0.03				-1	 	0	28	329.21839916398875	656.4222453947775	2	329.2179870605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5125	4100	9220
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9234	28.588	NaN	4225.3	30	0	1515.3	0.214	+			33314	RGRWRPGP	8	63	491.2787353945652	980.5429178559305	2	491.27874755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RGRWRPGP_	ENST00000556922.1_1_16:90002208-90002319:+|nuORF	28.2542754592877	0.7411748056684583	3				NaN	NaN	0	NaN	5129	4103	9233
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9235	28.591	NaN	3290.9	30	0	781.77	0.106	+			41327	SVLSAVWSI	9	65	481.2717717835177	960.5289906338354	2	481.2724914550781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVLSAVWSI_	ENST00000587789.2_1_19:55670919-55671346:-|nuORF	66.42927471994793	0.16001998865088202	3				NaN	NaN	0	NaN	5130	4103	9233
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9236	28.593	NaN	2629.9	30	0	271.12	0.036	+			43942	TPCSVRRIY	9	61	547.7909040624716	1093.567255191743	2	547.7919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TPCSVRRIY_	ENST00000479214.5_1_1:247108965-247109076:-|nuORF	53.351449002276354	0.2690372970092375	3				NaN	NaN	0	NaN	5131	4103	9233
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9242	28.609	NaN	3475.6	30	0	319.04	0.214	+			18491	ISGQHLVAG	9	55	441.2463715765664	880.4781902199328	2	441.2459411621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ISGQHLVAG_	ENST00000427761.1_1_13:68406302-68406587:-|nuORF	34.172542307311794	0.4838870758800184	3				NaN	NaN	0	NaN	5134	4106	9241
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9243	28.613	NaN	2319.8	30	0	315.21	0.106			+	9284	EHLGETAMI	9	65	508.73902745499265	1015.4635019767853	2	508.2884521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_EHLGETAM(Oxidation (M))I_	REV__ENSG00000069966|ENST00000261837|GNB5;REV__ENST00000560075.1_1_15:52439654-52476873:-|nuORF	47.91560031466742	0.327412564698279	3				NaN	NaN	0	NaN	5135	4106	9241
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9244	28.615	NaN	758.57	30	0	50.844	0.106			+	-1	MEERKKLC	8	53	526.7638549804688	NaN	0	526.7638549804688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))EERKKLC_	REV__ENSG00000102524|ENST00000375887|TNFSF13B;REV__nc|ENSG00000102524|Q9Y275-2|TNFSF13B;REV__nc|ENSG00000102524|Q9Y275-3|TNFSF13B;REV__TNFSF13B|p.F194Lfs*18|1|0.19|ENSG00000102524|chr13:108303348-108303348|T/-|frameshift_variant	37.15910966729921	1.7418937515398478	3				NaN	NaN	0	NaN	5136	4106	9241
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9245	28.617	NaN	1495.6	30	0	124.05	0.036	+			46520	VEVYKLKAE	9	60	539.8120451619168	NaN	0	539.8109130859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VEVYKLKAE_	AKAP9|p.A3671V|1|0.11|ENSG00000127914|chr7:92100971-92100971|C/T|missense_variant	32.75053402867276	0.3122164853807509	3				NaN	NaN	0	NaN	5137	4106	9241
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9249	28.63	NaN	9586.7	30	0	949.15	0.214	+			50449	YADVGGKQF	9	72	492.7438734374189	983.4731939416379	2	492.7433776855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YADVGGKQF_	ENSG00000180879|ENST00000370086|SSR4;ENST00000460616.5_1_X:153061851-153063636:+|nuORF;ENST00000485612.5_1_X:153061851-153063885:+|nuORF	112.41091882917199	0.026537921851008135	3				NaN	NaN	0	NaN	5138	4109	9248
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9250	28.634	NaN	3350.1	30	0	864.5	0.106	+			51337	YSPEGHVL	8	57	451.2246880275827	900.4348231219655	2	451.224365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YSPEGHVL_	ENSG00000203485|ENST00000392634|INF2;INF2|p.G1056Afs*31|1|0.29|ENSG00000203485|chr14:104714323-104714323|C/-|frameshift_variant;INF2|p.G1212Dfs*19|1|0.9|ENSG00000203485|chr14:104714794-104714810|GGGGCCGGGCCTCAAAG/-|frameshift_variant;INF2|p.P438Lfs*120|1|1.0|ENSG00000203485|chr14:104707576-104707576|C/-|frameshift_variant;INF2|p.P472Qfs*86|1|0.43|ENSG00000203485|chr14:104707676-104707676|C/-|frameshift_variant;INF2|p.V530Wfs*28|3|0.32|ENSG00000203485|chr14:104707848-104707848|C/-|frameshift_variant;nc|ENSG00000203485|Q27J81-2|INF2;nc|ENSG00000203485|Q27J81-3|INF2	33.51558372728122	0.7005509609380386	3				NaN	NaN	0	NaN	5139	4109	9248
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9251	28.636	NaN	2670.5	30	0	454.91	0.106	+			1304	AESVVPARM	9	60	480.2534131489315	958.492273364663	2	480.2529602050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AESVVPARM_	ENSG00000167508|ENST00000301012|MVD;ENST00000565149.5_1_16:88718935-88722722:-|nuORF	90.36981228632155	0.0638227155548745	3				NaN	NaN	0	NaN	5140	4109	9248
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9252	28.638	NaN	2355.9	30	0	560.81	0.106	+			39005	SSSGFVAIK	9	47	448.2484939322165	894.482434931233	2	448.2482604980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSSGFVAIK_	ENSG00000198478|ENST00000369838|SH3BGRL2;SH3BGRL2|p.P55Rfs*41|2|0.28|ENSG00000198478|chr6:79673727-79673727|C/-|frameshift_variant	74.25504064058377	0.12238981753128622	3				NaN	NaN	0	NaN	5141	4109	9248
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9253	28.639	NaN	2326.3	30	0	352.33	0.106	+			41679	SVSDFNYSR	9	63	537.7463702139308	1073.4781874946616	2	537.7469482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVSDFNYSR_	ENSG00000112851|ENST00000284037|ERBIN;nc|ENSG00000112851|Q96RT1-2|ERBIN;nc|ENSG00000112851|Q96RT1-3|ERBIN;nc|ENSG00000112851|Q96RT1-4|ERBIN;nc|ENSG00000112851|Q96RT1-5|ERBIN;nc|ENSG00000112851|Q96RT1-6|ERBIN;nc|ENSG00000112851|Q96RT1-7|ERBIN;nc|ENSG00000112851|Q96RT1-8|ERBIN;nc|ENSG00000112851|Q96RT1-9|ERBIN	72.87924865735499	0.12833875048249987	3				NaN	NaN	0	NaN	5142	4109	9248
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9254	28.641	NaN	1011.1	30	0	144.37	0.106			+	25416	LPLKGPAR	8	44	426.27679930579603	NaN	0	426.2771301269531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LPLKGPAR_	REV__ENSG00000275342|ENST00000615670|PRAG1	21.70233525837049	1.7418937515398478	3				NaN	NaN	0	NaN	5143	4109	9248
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9255	28.643	NaN	1137.6	30	0	144.33	0.036	+			31216	QGSLTVQCAY	10	57	535.2524052970447	1068.4902576608893	2	535.25341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QGSLTVQCAY_	ENSG00000204345|ENST00000375352|CD300LD	32.81241826257853	0.6118718159329168	3				NaN	NaN	0	NaN	5144	4109	9248
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9260	28.657	NaN	3421.1	30	0	388.21	0.214	+			42101	SYISRTNQL	9	70	541.2859091258314	1080.5572653184627	2	541.2875366210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SYISRTNQL_	AHCTF1|p.E1870Kfs*19|1|0.27|ENSG00000153207|chr1:246850426-246850426|T/-|frameshift_variant;AHCTF1|p.G1113Wfs*13|1|0.07|ENSG00000153207|chr1:246867281-246867282|-/A|frameshift_variant;ENSG00000153207|ENST00000648844|AHCTF1;nc|ENSG00000153207|Q8WYP5-2|AHCTF1;nc|ENSG00000153207|Q8WYP5-3|AHCTF1	96.66504779109242	0.04607440320619715	3				NaN	NaN	0	NaN	5146	4112	9259
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9261	28.661	NaN	1664.8	30	0	158.21	0.106			+	-1	MALIHRCPL	9	54	563.7945319572725	NaN	0	563.7978515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))ALIHRC(Carbamidomethyl (C))PL_	REV__ENSG00000168612|ENST00000372523|ZSWIM1	31.954861631926434	0.3162336699109506	3				NaN	NaN	0	NaN	5147	4112	9259
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9262	28.663	NaN	2764.7	30	0	302.58	0.034	+			43328	TGASVIRAY	9	55	469.2590130610242	936.5034731888484	2	469.7603454589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TGASVIRAY_	ENSG00000108846|ENST00000285238|ABCC3;ENST00000502426.5_1_17:48736553-48755440:+|nuORF;nc|ENSG00000108846|O15438-2|ABCC3;nc|ENSG00000108846|O15438-4|ABCC3	93.1432384553994	0.056003526918089595	3				NaN	NaN	0	NaN	5148	4112	9259
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9269	28.679	NaN	2486.3	30	0	227.97	0.214				-1	 	0	62	597.2860788865788	596.2788024199788	1	597.2868041992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5152	4115	9268
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9270	28.683	NaN	1978.2	30	0	152.33	0.106	+			13887	GRDGTRFCH	9	65	553.2516650888925	NaN	0	553.251953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GRDGTRFC(Carbamidomethyl (C))H_	ENSG00000143512|ENST00000343410|HHIPL2;HHIPL2|p.L457*|1|0.39|ENSG00000143512|chr1:222540090-222540090|A/-|frameshift_variant	46.45678178249821	0.2311111838007999	3				NaN	NaN	0	NaN	5153	4115	9268
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9271	28.684	NaN	2058.1	30	0	690.35	0.106	+			49409	VVTVETDHPLL	11	36	408.22723388671875	NaN	0	408.22723388671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVTVETDHPLL_	ENSG00000196511|ENST00000360057|TPK1;ENST00000378098.8_1_7:144150640-144304024:-|nuORF	25.125986553469783	0.45344013546260314	3				NaN	NaN	0	NaN	5154	4115	9268
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9272	28.686	NaN	1495.8	30	0	157.06	0.106	+			42260	TAASCIIGPL	10	57	473.2583923339844	NaN	0	473.2583923339844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TAASCIIGPL_	tr|U7T1S7|U7T1S7_FUSNUTRAPC4-dicarboxylatetransportsystempermeaseDctMsubunitdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00560PE=4SV=1	37.15910966729921	0.3781637092648983	3				NaN	NaN	0	NaN	5155	4115	9268
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9273	28.688	NaN	935.37	30	0	150.34	0.037			+	33232	RFVTIFIQI	9	32	379.5650939941406	NaN	0	379.5650939941406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RFVTIFIQI_	REV__ENSG00000182070|ENST00000380367|OR52A1;REV__OR52A1|p.F254Nfs*56|1|0.04|ENSG00000182070|chr11:5151610-5151611|-/ATGTT|frameshift_variant	24.519189625965996	0.35377483217337163	3				NaN	NaN	0	NaN	5156	4115	9268
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9281	28.706	NaN	7839.8	30	0	1560.8	0.214	+			41244	SVLGQAMEK	9	65	481.75410341074917	961.4936538882984	2	481.7519836425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVLGQAMEK_	CYP51A1|p.L333Wfs*13|1|0.15|ENSG00000001630|chr7:92123208-92123208|A/-|frameshift_variant;ENSG00000001630|ENST00000003100|CYP51A1	98.58198989935565	0.04066992115528678	3				NaN	NaN	0	NaN	5161	4118	9280
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9282	28.71	NaN	12462	30	0	2662.3	0.036	+			44484	TSRWNPWK	8	72	537.7775502690357	1073.5405476048713	2	537.77734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TSRWNPWK_	ENST00000469423.1_1_19:12757375-12758379:-|nuORF	42.47446043378293	0.6409579893742323	3				NaN	NaN	0	NaN	5162	4118	9280
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9288	28.725	NaN	1901.1	30	0	759.86	0.214			+	28831	NPPVPVRL	8	53	446.27439866461094	890.5342443960219	2	446.27392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NPPVPVRL_	REV__ARHGEF1|p.G859Afs*4|1|0.32|ENSG00000076928|chr19:41906537-41906537|G/-|frameshift_variant;REV__ARHGEF1|p.L344Wfs*12|2|0.31|ENSG00000076928|chr19:41896386-41896386|C/-|frameshift_variant;REV__ENSG00000076928|ENST00000354532|ARHGEF1;REV__ENST00000600274.5_1_19:42396347-42410935:+|nuORF;REV__nc|ENSG00000076928|Q92888-2|ARHGEF1;REV__nc|ENSG00000076928|Q92888-3|ARHGEF1;REV__nc|ENSG00000076928|Q92888-4|ARHGEF1	24.20275056022122	0.7724576178584145	3				NaN	NaN	0	NaN	5165	4121	9287
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9289	28.728	NaN	3135.8	30	0	949.88	0.106	+			12125	GAGGAFATVL	10	47	432.2348678320097	862.4551827308194	2	432.2345886230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GAGGAFATVL_	tr|U7SKI7|U7SKI7_FUSNUGluconate:H+symporter(GntP)familytransporterOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02044PE=4SV=1	63.30626980617807	0.33577009411590547	3				NaN	NaN	0	NaN	5166	4121	9287
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9290	28.73	NaN	1754.3	30	0	328.23	0.106			+	623	ADVKEKEAQ	9	59	509.2638448581206	NaN	0	509.26409912109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ADVKEKEAQ_	REV__ENSG00000156265|ENST00000399928|MAP3K7CL;REV__ENST00000470800.1_1_21:30518012-30547210:+|nuORF;REV__nc|ENSG00000156265|P57077-1|MAP3K7CL	40.77816245573522	0.2702456086868081	3				NaN	NaN	0	NaN	5167	4121	9287
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9291	28.732	NaN	1786.3	30	0	226.61	0.106				-1	KMIKELGYE	9	60	563.7945319572725	NaN	0	563.7933959960938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_KM(Oxidation (M))IKELGYE_	tr|U7STV9|U7STV9_FUSNUBiotinsynthaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=bioBPE=3SV=1	40.77816245573522	0.2702456086868081	3				NaN	NaN	0	NaN	5168	4121	9287
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9292	28.734	NaN	2350.7	30	0	304.32	0.106	+			12434	GEASKLQQF	9	60	504.2616179412177	1006.5086829492354	2	504.2592468261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GEASKLQQF_	ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1	65.2775769800794	0.16962058972581526	3				NaN	NaN	0	NaN	5169	4121	9287
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9293	28.735	NaN	1130.3	30	0	300.09	0.034			+	36561	SFQLVLSAG	9	48	461.2558200798172	920.4970872264345	2	461.25604248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SFQLVLSAG_	REV__nc|ENSG00000225830|P0DP91|ERCC6	42.396135135203025	0.392153681582562	3				NaN	NaN	0	NaN	5170	4121	9287
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9300	28.752	NaN	3444.9	30	0	382.63	0.213			+	37345	SLESLIQEPVS	11	70	601.3193106784931	1200.6240684237862	2	601.3197021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLESLIQEPVS_	REV__ENST00000606011.1_1_13:96328766-96328880:-|nuORF	61.691277971877994	0.30835813808799384	3				NaN	NaN	0	NaN	5174	4124	9299
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9301	28.755	NaN	2109.6	30	0	775.33	0.106			+	2769	ARLLPSGRE	9	58	499.79070300263794	NaN	0	499.7903747558594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ARLLPSGRE_	REV__ENST00000332783.11_1_15:101142945-101143215:+|nuORF	40.05817265558897	0.275207446262312	3				NaN	NaN	0	NaN	5175	4124	9299
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9302	28.757	NaN	3035.6	30	0	292.82	0.106			+	50981	YILSGHDTI	9	59	509.7637802939818	1017.5130076547637	2	509.7641296386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YILSGHDTI_	REV__ENSG00000132109|ENST00000254436|TRIM21;REV__nc|ENSG00000132109|P19474-2|TRIM21	52.936696900407355	0.27249468807391813	3				NaN	NaN	0	NaN	5176	4124	9299
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9303	28.759	NaN	2062	30	0	151.24	0.106	+			16964	HPQPGAVEL	9	62	474.25109580991585	946.4876386866317	2	474.2505798339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HPQPGAVEL_	ENSG00000084774|ENST00000264705|CAD	35.61828744233558	0.47037581924408073	3				NaN	NaN	0	NaN	5177	4124	9299
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9304	28.761	NaN	2690.7	30	0	257.79	0.106			+	23808	LCPTPRQP	8	55	456.241879606677	910.469206280154	2	456.24169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LCPTPRQP_	REV__ENST00000428931.5_1_1:154242855-154243155:+|nuORF	33.51558372728122	0.7005509609380386	3				NaN	NaN	0	NaN	5178	4124	9299
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9305	28.763	NaN	1561.3	30	0	173.37	0.106			+	13344	GKSHCKNLPHG	11	51	589.2979566414211	1176.5813603496422	2	589.7951049804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GKSHCKNLPHG_	REV__ENST00000282541.9_1_3:32208294-32208585:+|nuORF	29.170058357718403	0.683821074385409	3				NaN	NaN	0	NaN	5179	4124	9299
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9306	28.765	NaN	1937.1	30	0	395.83	0.038				-1	NDMLREKVTG	10	29	393.5322570800781	NaN	0	393.5322570800781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_NDM(Oxidation (M))LREKVTG_	ENSG00000138821|ENST00000356736|SLC39A8;nc|ENSG00000138821|Q9C0K1-2|SLC39A8	20.83715455343099	0.4201028297492154	3				NaN	NaN	0	NaN	5180	4124	9299
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9312	28.781	NaN	17492	30	0	2545.3	0.214				-1	 	0	76	478.76207199292094	955.5095910526419	2	478.7611999511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5183	4127	9311
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9313	28.784	NaN	6559.5	30	0	1223.2	0.106	+			40310	STSSVIMMK	9	62	492.24877201499214	NaN	0	492.24859619140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STSSVIMMK_	ENST00000521804.1_1_8:142264568-142318349:-|nuORF	104.74654710444128	0.014441433212055448	3				NaN	NaN	0	NaN	5184	4127	9311
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9314	28.786	NaN	8062.7	30	0	3736.8	0.106	+			46723	VGPGPVRTL	9	57	448.2719288736001	894.5293048140002	2	448.2711181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VGPGPVRTL_	ENSG00000074964|ENST00000361221|ARHGEF10L;ENST00000469726.5_1_1:17942561-18023872:+|nuORF;nc|ENSG00000074964|Q9HCE6-2|ARHGEF10L;nc|ENSG00000074964|Q9HCE6-3|ARHGEF10L;nc|ENSG00000074964|Q9HCE6-4|ARHGEF10L;nc|ENSG00000074964|Q9HCE6-5|ARHGEF10L	93.19546047674547	0.05585629608842056	3				NaN	NaN	0	NaN	5185	4127	9311
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9315	28.788	NaN	5520.7	30	0	867.2	0.106	+			12797	GELVVVMCL	9	63	481.75410341074917	961.4936538882984	2	482.2587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GELVVVMCL_	ENST00000457870.5_1_2:70321210-70322104:-|nuORF	42.47446043378293	0.39123495718708534	3				NaN	NaN	0	NaN	5186	4127	9311
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9316	28.79	NaN	4336.3	30	0	1116.9	0.106	+			45028	TVFVKEKNP	9	72	531.3037413166791	1060.592929700158	2	531.3030395507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TVFVKEKNP_	PCDHA3|p.N467K|1|0.25|ENSG00000255408|chr5:140802598-140802598|C/A|missense_variant	51.33545320467046	0.2872990594074956	3				NaN	NaN	0	NaN	5187	4127	9311
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9317	28.792	NaN	1945.9	30	0	129.2	0.106	+			29223	NVWITLTVV	9	61	522.8074205846149	NaN	0	522.8069458007812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NVWITLTVV_	ENSG00000165186|ENST00000379361|PTCHD1;nc|ENSG00000165186|Q96NR3-2|PTCHD1;PTCHD1|p.N789Mfs*8|1|0.33|ENSG00000165186|chrX:23393879-23393879|A/-|frameshift_variant	42.396135135203025	0.2590952873412954	3				NaN	NaN	0	NaN	5188	4127	9311
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9318	28.793	NaN	1951.4	30	0	215.7	0.037			+	31708	QNQKQVIKY	9	65	574.8247465974811	1147.634940261762	2	574.8248901367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QNQKQVIKY_	REV__ENSG00000136048|ENST00000258534|DRAM1;REV__nc|ENSG00000136048|Q8N682-2|DRAM1	38.80614096846853	0.43426287593479557	3				NaN	NaN	0	NaN	5189	4127	9311
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9322	28.807	NaN	6265.6	30	0	1418.4	0.214	+			23712	LAVDKSASL	9	66	452.26116224045967	902.5077715477194	2	452.2607727050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LAVDKSASL_	ENSG00000065526|ENST00000375759|SPEN;SPEN|p.A2105Lfs*33|1|0.46|ENSG00000065526|chr1:15932548-15932548|G/-|frameshift_variant;SPEN|p.A2251Qfs*102|3|0.29|ENSG00000065526|chr1:15932985-15932985|C/-|frameshift_variant	72.87924865735499	0.12833875048249987	3				NaN	NaN	0	NaN	5190	4130	9321
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9323	28.811	NaN	5444.3	30	0	656.93	0.106	+			36186	SELITKAVA	9	57	466.27683581669623	930.5391187001925	2	466.2763977050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SELITKAVA_	ENSG00000124575|ENST00000244534|H1-3;ENSG00000168298|ENST00000304218|H1-4;ENSG00000184357|ENST00000331442|H1-5;ENSG00000187837|ENST00000343677|H1-2	54.722347961057174	0.257609425301511	3				NaN	NaN	0	NaN	5191	4130	9321
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9324	28.813	NaN	7862.4	30	0	707.47	0.106	+			49644	VYIKHPVSL	9	74	528.3163152302692	1054.6180775273383	2	528.3162231445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYIKHPVSL_	ENSG00000099341|ENST00000215071|PSMD8;ENST00000592001.5_1_19:38865430-38871817:+|nuORF	125.81401957644128	0.01768009863045738	3				NaN	NaN	0	NaN	5192	4130	9321
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9325	28.815	NaN	16654	30	0	11133	0.106			+	47818	VSKKQKSETLA	11	61	406.9069826100252	1217.6991184302756	3	406.9063720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSKKQKSETLA_	REV__ZMYM6|p.N1298Kfs*48|1|0.31|ENSG00000163867|chr1:34987188-34987189|-/T|frameshift_variant	28.5767321226876	0.690044582712672	3				NaN	NaN	0	NaN	5193	4130	9321
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9326	28.816	NaN	4287.2	30	0	2385.4	0.106	+			49478	VVYSGLENIKK	11	42	417.24345500045956	1248.7085356015787	3	417.24285888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVYSGLENIKK_	ENSG00000153406|ENST00000283429|NMRAL1	35.17822180527639	0.6208003396870814	3				NaN	NaN	0	NaN	5194	4130	9321
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9327	28.818	NaN	6965.5	30	0	1628.7	0.106				-1	PVCRRRVL	8	46	352.54669184084344	1054.6182461227304	3	352.54632568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_PVC(Carbamidomethyl (C))RRRVL_	ENST00000360467.5_1_13:110959634-110959862:+|nuORF	25.450171626174864	0.7628259754767981	3				NaN	NaN	0	NaN	5195	4130	9321
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9328	28.82	NaN	1584.2	30	0	410.62	0.037				-1	LVGYGMPALIV	11	43	383.5523901958852	1147.6353411878556	3	383.5520324707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_LVGYGM(Oxidation (M))PALIV_	ADGRL3|p.H1275Lfs*11|1|0.08|ENSG00000150471|chr4:62070322-62070322|A/-|frameshift_variant;ADGRL3|p.S1005Nfs*24|1|0.05|ENSG00000150471|chr4:61983584-61983585|-/ACATCCAG|frameshift_variant;ENSG00000150471|ENST00000683033|ADGRL3;nc|ENSG00000150471|Q9HAR2-2|ADGRL3;nc|ENSG00000150471|Q9HAR2-4|ADGRL3;nc|ENSG00000150471|Q9HAR2|ADGRL3	33.921630207806714	0.6339809607503234	3				NaN	NaN	0	NaN	5196	4130	9321
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9334	28.835	NaN	5277.8	30	0	1118.9	0.214	+			24214	LERMGANSL	9	68	495.754785444954	989.495017956708	2	495.75518798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LERMGANSL_	ENSG00000099783|ENST00000325495|HNRNPM;ENSG00000099783|ENST00000325495|HNRNPM;nc|ENSG00000099783|P52272-2|HNRNPM;nc|ENSG00000099783|P52272-2|HNRNPM	120.30596017624542	0.02101454110788768	3				NaN	NaN	0	NaN	5199	4133	9333
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9335	28.838	NaN	2918.5	30	0	1620.1	0.106			+	51079	YLPFTSPQQP	10	54	589.2979566414211	1176.5813603496422	2	589.2979736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YLPFTSPQQP_	REV__ENSG00000114698|ENST00000354952|PLSCR4;REV__ENST00000475019.1_1_3:145914494-145939873:-|nuORF;REV__nc|ENSG00000114698|Q9NRQ2-2|PLSCR4;REV__PLSCR4|p.Y143Sfs*5|1|0.07|ENSG00000114698|chr3:146200009-146200010|-/GACAATGCAG|frameshift_variant	32.81241826257853	0.6118718159329168	3				NaN	NaN	0	NaN	5200	4133	9333
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9336	28.84	NaN	2874	30	0	236.66	0.106	+			7177	DAGPPTHAF	9	64	456.71439766241645	911.4142423916329	2	456.71417236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DAGPPTHAF_	ENSG00000139946|ENST00000267460|PELI2;ENSG00000197329|ENST00000358912|PELI1	37.15910966729921	0.4535818937225704	3				NaN	NaN	0	NaN	5201	4133	9333
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9337	28.842	NaN	3350	30	0	331.3	0.106	+			49694	VYKPAQNSW	9	68	546.7759229783007	1091.5372930234014	2	547.2794189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VYKPAQNSW_	ENSG00000120696|ENST00000379483|KBTBD7;ENSG00000165572|ENST00000379485|KBTBD6;KBTBD6|p.C613Afs*34|1|0.51|ENSG00000165572|chr13:41130675-41130675|A/-|frameshift_variant	77.31757898189308	0.1091473830098891	3				NaN	NaN	0	NaN	5202	4133	9333
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9338	28.844	NaN	1513.2	30	0	173.5	0.106	+			3290	ASLQSIIHK	9	57	498.7958087167608	995.5770645003216	2	498.795654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASLQSIIHK_	ENSG00000095787|ENST00000354911|WAC;nc|ENSG00000095787|Q9BTA9-2|WAC;nc|ENSG00000095787|Q9BTA9-3|WAC;nc|ENSG00000095787|Q9BTA9-5|WAC	56.72105179125745	0.24094814563026265	3				NaN	NaN	0	NaN	5203	4133	9333
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9339	28.845	NaN	1792.5	30	0	105.47	0.106	+			25268	LNPISKTLF	9	67	516.8064303135992	1031.5983076939983	2	516.8058471679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LNPISKTLF_	ENST00000393485.5_1_7:115580607-115581081:-|nuORF	47.95952297671804	0.32689736945648856	3				NaN	NaN	0	NaN	5204	4133	9333
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9340	28.847	NaN	1375.4	30	0	450.92	0.036	+			3627	ASVVFNLLR	9	29	340.20634589379756	1017.5972082815927	3	340.20611572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASVVFNLLR_	nc|ENSG00000272395|K9M1U5-3|IFNL4;nc|ENSG00000272395|K9M1U5-4|IFNL4;nc|ENSG00000272395|K9M1U5|IFNL4	17.468008924990375	0.6112419832031292	3				NaN	NaN	0	NaN	5205	4133	9333
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9345	28.861	NaN	7977.9	30	0	1192.1	0.214	+			42992	TEKKEIAIL	9	72	522.8186418082618	1043.6227306833234	2	522.8187866210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEKKEIAIL_	CCPG1|p.K524Nfs*118|1|0.26|ENSG00000260916|chr15:55360201-55360201|T/-|frameshift_variant;ENSG00000260916|ENST00000442196|CCPG1;ENST00000568372.5_1_15:55651699-55664264:-|nuORF;nc|ENSG00000260916|Q9ULG6-2|CCPG1;nc|ENSG00000260916|Q9ULG6-4|CCPG1;nc|ENSG00000260916|Q9ULG6|CCPG1	80.45461616416974	0.09558281504443908	3				NaN	NaN	0	NaN	5207	4136	9344
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9346	28.865	NaN	4355.4	30	0	354.6	0.106	+			43965	TPEEKSAVTAL	11	76	573.3062396896557	1144.5979264461114	2	573.3062744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TPEEKSAVTAL_	ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF	60.1669710687717	0.32196467475348695	3				NaN	NaN	0	NaN	5208	4136	9344
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9347	28.867	NaN	3585.3	30	0	461.22	0.106	+			41375	SVMGVTVSR	9	56	468.25268043028746	934.4908079273749	2	468.2523193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVMGVTVSR_	DIP2B|p.A1021Cfs*11|1|0.32|ENSG00000066084|chr12:50721279-50721280|-/CTGTATGCAC|frameshift_variant;DIP2B|p.I979Afs*17|1|0.13|ENSG00000066084|chr12:50718790-50718815|AAATAGAAGAGAATGATTTGGTGAGG/-|frameshift_variant;DIP2B|p.V1240Dfs*9|1|0.05|ENSG00000066084|chr12:50731445-50731446|-/ATATTTAC|frameshift_variant;DIP2B|p.V893Gfs*91|1|0.06|ENSG00000066084|chr12:50714417-50714418|-/G|frameshift_variant;ENSG00000066084|ENST00000301180|DIP2B	96.0336014099291	0.047854655524928534	3				NaN	NaN	0	NaN	5209	4136	9344
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9348	28.869	NaN	5094.6	30	0	683.33	0.106	+			5468	AVAAFQVEK	9	66	481.769090115074	961.523627296948	2	481.76873779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVAAFQVEK_	ENSG00000185000|ENST00000528718|DGAT1;ENST00000525371.1_1_8:145542007-145542573:-|nuORF;ENST00000531896.5_1_8:145541583-145550314:-|nuORF	60.11826168202944	0.21262886028301267	3				NaN	NaN	0	NaN	5210	4136	9344
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9349	28.871	NaN	2535.9	30	0	441.55	0.106	+			27603	MPNGTVQRF	9	65	525.2634365737749	1048.5123202143498	2	525.2634887695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MPNGTVQRF_	BPTF|p.D2844Afs*20|1|0.08|ENSG00000171634|chr17:67959766-67959767|-/C|frameshift_variant;BPTF|p.K2718Nfs*36|3|0.12|ENSG00000171634|chr17:67948150-67948150|A/-|frameshift_variant;ENSG00000171634|ENST00000306378|BPTF;ENST00000582406.1_1_17:65940388-65941531:+|nuORF;ENST00000584931.1_1_17:65936727-65940601:+|nuORF;nc|ENSG00000171634|Q12830-4|BPTF;nc|ENSG00000171634|Q12830|BPTF	51.19269402634007	0.2889735674168909	3				NaN	NaN	0	NaN	5211	4136	9344
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9350	28.872	NaN	1743.5	30	0	190.43	0.106	+			47332	VPASPLPGLE	10	59	490.27674274289217	978.5389325525844	2	490.2764892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VPASPLPGLE_	ENSG00000072518|ENST00000402010|MARK2;ENST00000535116.1_1_11:63670194-63670631:+|nuORF;MARK2|p.Q563Sfs*53|1|0.41|ENSG00000072518|chr11:63904791-63904791|C/-|frameshift_variant;MARK2|p.T549Rfs*67|2|0.4|ENSG00000072518|chr11:63904110-63904110|C/-|frameshift_variant;nc|ENSG00000072518|Q7KZI7-10|MARK2;nc|ENSG00000072518|Q7KZI7-11|MARK2;nc|ENSG00000072518|Q7KZI7-12|MARK2;nc|ENSG00000072518|Q7KZI7-13|MARK2;nc|ENSG00000072518|Q7KZI7-14|MARK2;nc|ENSG00000072518|Q7KZI7-15|MARK2;nc|ENSG00000072518|Q7KZI7-16|MARK2;nc|ENSG00000072518|Q7KZI7-2|MARK2;nc|ENSG00000072518|Q7KZI7-3|MARK2;nc|ENSG00000072518|Q7KZI7-4|MARK2;nc|ENSG00000072518|Q7KZI7-5|MARK2;nc|ENSG00000072518|Q7KZI7-6|MARK2;nc|ENSG00000072518|Q7KZI7-7|MARK2;nc|ENSG00000072518|Q7KZI7-8|MARK2;nc|ENSG00000072518|Q7KZI7-9|MARK2	47.657333605630114	0.47858658696240314	3				NaN	NaN	0	NaN	5212	4136	9344
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9351	28.874	NaN	1901.2	30	0	223.61	0.034			+	33744	RPPPTLPF	8	55	462.76870324217913	923.5228535511583	2	462.768310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RPPPTLPF_	REV__ENST00000483039.5_1_17:7461620-7463377:+|nuORF	47.91560031466742	0.6071945918984287	3				NaN	NaN	0	NaN	5213	4136	9344
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9360	28.894	NaN	5207	30	0	490.21	0.214			+	9243	EGVASKPIL	9	67	457.27144164161484	912.5283303500297	2	457.27105712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EGVASKPIL_	REV__ENSG00000139626|ENST00000267082|ITGB7;REV__nc|ENSG00000139626|P26010-2|ITGB7	45.97224482568171	0.3502073465782774	3				NaN	NaN	0	NaN	5219	4139	9359
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9361	28.898	NaN	3782.4	30	0	347.74	0.106	+			36599	SGATIRIFK	9	70	496.7985361724502	991.5825194117004	2	496.79779052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SGATIRIFK_	ENSG00000100596|ENST00000216484|SPTLC2;ENSG00000172296|ENST00000399002|SPTLC3	54.722347961057174	0.257609425301511	3				NaN	NaN	0	NaN	5220	4139	9359
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9362	28.9	NaN	2335.2	30	0	227.04	0.106	+			45108	TVIQSTQGMYK	11	70	628.3218001509748	1254.6290473687495	2	628.3219604492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVIQSTQGMYK_	ENSG00000165434|ENST00000298198|PGM2L1;PGM2L1|p.S149Qfs*22|1|0.29|ENSG00000165434|chr11:74370928-74370928|A/-|frameshift_variant;PGM2L1|p.S299Lfs*19|1|0.24|ENSG00000165434|chr11:74347192-74347192|A/-|frameshift_variant	57.148748479083515	0.34890646465650643	3				NaN	NaN	0	NaN	5221	4139	9359
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9363	28.901	NaN	2086.6	30	0	302.52	0.106			+	13765	GQFTGEKIQ	9	57	504.2616179412177	1006.5086829492354	2	504.7619934082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GQFTGEKIQ_	REV__ENSG00000205213|ENST00000379214|LGR4;REV__nc|ENSG00000205213|Q9BXB1-2|LGR4	61.691277971877994	0.19951612995419254	3				NaN	NaN	0	NaN	5222	4139	9359
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9364	28.903	NaN	2173.1	30	0	860.33	0.036	+			6432	AVWTRKVLG	9	36	343.87860208144787	1028.6139768445437	3	343.8784484863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVWTRKVLG_	ENST00000508648.5_1_4:129100626-129128462:+|nuORF;nc|ENSG00000138709|Q659C4-9|LARP1B	20.94693142431847	0.6074874384046576	3				NaN	NaN	0	NaN	5223	4139	9359
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9370	28.919	NaN	22061	30	0	4151	0.214	+			19047	IYGSSHSW	8	86	468.7143395580029	935.4141261828058	2	468.7138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IYGSSHSW_	DUOX1|p.S186N|1|0.29|ENSG00000137857|chr15:45135535-45135535|G/A|missense_variant;ENSG00000137857|ENST00000389037|DUOX1;ENSG00000140279|ENST00000389039|DUOX2;nc|ENSG00000140279|Q9NRD8|DUOX2	92.19062340807069	0.27083854825242376	3				NaN	NaN	0	NaN	5226	4142	9369
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9371	28.923	NaN	2791.3	30	0	381.33	0.106	+			28365	NEKVIEHIM	9	59	556.7920259729001	1111.5694990126	2	556.792236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NEKVIEHIM_	ENSG00000163220|ENST00000368738|S100A9	91.26522074875469	0.06129826844580791	3				NaN	NaN	0	NaN	5227	4142	9369
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9372	28.925	NaN	1470.7	30	0	319.1	0.106			+	-1	RVAVDVPLP	9	35	336.53440004144954	1006.5813707245486	3	336.5340576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))RVAVDVPLP_	REV__ENSG00000181555|ENST00000409792|SETD2;REV__nc|ENSG00000181555|Q9BYW2-2|SETD2;REV__nc|ENSG00000181555|Q9BYW2-3|SETD2;REV__SETD2|p.N1396Mfs*16|1|0.42|ENSG00000181555|chr3:47120449-47120449|T/-|frameshift_variant;REV__SETD2|p.P226L|1|0.39|ENSG00000181555|chr3:47123959-47123959|G/A|missense_variant;REV__SETD2|p.R1407Gfs*5|1|0.18|ENSG00000181555|chr3:47120417-47120417|T/-|frameshift_variant;REV__SETD2|p.T1652Yfs*14|1|0.26|ENSG00000181555|chr3:47101519-47101520|-/A|frameshift_variant;REV__SETD2|p.T305Qfs*35|2|0.24|ENSG00000181555|chr3:47123723-47123723|T/-|frameshift_variant	19.359975847455235	0.6112419832031293	3				NaN	NaN	0	NaN	5228	4142	9369
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9373	28.927	NaN	1587.3	30	0	321.73	0.106			+	-1	MCFRLVGGALN	11	42	413.2123251630272	1236.6151460892816	3	413.2121276855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_MC(Carbamidomethyl (C))FRLVGGALN_	REV__ENSG00000140853|ENST00000688547|NLRC5;REV__ENST00000538453.5_1_16:57103718-57116437:+|nuORF;REV__ENST00000545081.5_1_16:57093337-57116437:+|nuORF;REV__nc|ENSG00000140853|Q86WI3-4|NLRC5	19.262678746197807	0.7802940895261122	3				NaN	NaN	0	NaN	5229	4142	9369
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9374	28.928	NaN	923.08	30	0	175.91	0.106			+	19861	KEEKLEPYH	9	51	586.798828125	NaN	0	586.798828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEEKLEPYH_	REV__ENSG00000123472|ENST00000574428|ATPAF1;REV__nc|ENSG00000123472|Q5TC12-2|ATPAF1;REV__nc|ENSG00000123472|Q5TC12-3|ATPAF1	34.172542307311794	0.30503706118289736	3				NaN	NaN	0	NaN	5230	4142	9369
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9375	28.93	NaN	1728.9	30	0	203.97	0.106	+			36302	SERVVQEAL	9	61	515.7800550805383	NaN	0	515.77978515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SERVVQEAL_	ENSG00000197150|ENST00000358849|ABCB8;ENST00000466514.5_1_7:150731570-150742433:+|nuORF;ENST00000482899.1_1_7:150737654-150742433:+|nuORF;nc|ENSG00000197150|Q9NUT2-3|ABCB8;nc|ENSG00000197150|Q9NUT2-4|ABCB8;nc|ENSG00000197150|Q9NUT2-5|ABCB8;nc|ENSG00000197150|Q9NUT2|ABCB8	42.86426827375447	0.2558691296974908	3				NaN	NaN	0	NaN	5231	4142	9369
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9376	28.932	NaN	1073.4	30	0	90.719	0.038	+			4787	ATNKILVDMAK	11	40	401.8971252441406	NaN	0	401.8971252441406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATNKILVDMAK_	ENSG00000165392|ENST00000298139|WRN;WRN|p.D1302Ifs*7|1|0.24|ENSG00000165392|chr8:31157445-31157445|C/-|frameshift_variant	25.06778042989391	0.45369953550010306	3				NaN	NaN	0	NaN	5232	4142	9369
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9382	28.947	NaN	2638.2	30	0	521.84	0.214	+			44824	TTSSPEKWP	9	64	516.7535976098724	1031.4926422865447	2	516.7540283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTSSPEKWP_	FOXI1|p.R267W|1|0.27|ENSG00000168269|chr5:170108273-170108273|C/T|missense_variant	32.81241826257853	0.4965981579233955	3				NaN	NaN	0	NaN	5235	4145	9381
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9383	28.95	NaN	2282.6	30	0	247.58	0.106	+			36626	SGGITAVPL	9	53	407.7376850781675	813.460817223135	2	407.7366638183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SGGITAVPL_	BSN|p.P3390Hfs*97|1|0.22|ENSG00000164061|chr3:49662009-49662009|C/-|frameshift_variant;BSN|p.P3790Hfs*5|1|0.5|ENSG00000164061|chr3:49663523-49663523|C/-|frameshift_variant;ENSG00000164061|ENST00000296452|BSN	47.91560031466742	0.327412564698279	3				NaN	NaN	0	NaN	5236	4145	9381
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9384	28.952	NaN	1902.2	30	0	261.64	0.106	+			36390	SETKKGFYSL	10	63	580.3035319765133	1158.5925110198266	2	580.30322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SETKKGFYSL_	ENSG00000155926|ENST00000338087|SLA;nc|ENSG00000155926|Q13239-2|SLA;nc|ENSG00000155926|Q13239-3|SLA;nc|ENSG00000155926|Q13239-5|SLA	61.691277971877994	0.35045824941635534	3				NaN	NaN	0	NaN	5237	4145	9381
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9385	28.954	NaN	2561.2	30	0	903.19	0.106	+			30906	QEKVSDYEM	9	54	564.747319225829	1127.4800855184578	2	564.7481079101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QEKVSDYEM_	ENSG00000132646|ENST00000379143|PCNA	37.81151784470057	0.4459294069877048	3				NaN	NaN	0	NaN	5238	4145	9381
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9386	28.956	NaN	1429.3	30	0	104.68	0.038				-1	QFMQEQGISL	10	51	598.78472049209	1195.5548880509798	2	598.7841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_QFM(Oxidation (M))QEQGISL_	ENSG00000064692|ENST00000261368|SNCAIP;ENST00000510003.5_1_5:121726829-121776497:+|nuORF;ENST00000512146.6_1_5:121736783-121799188:+|nuORF;nc|ENSG00000064692|Q9Y6H5-2|SNCAIP;nc|ENSG00000064692|Q9Y6H5-3|SNCAIP;nc|ENSG00000064692|Q9Y6H5-4|SNCAIP;nc|ENSG00000064692|Q9Y6H5-5|SNCAIP;nc|ENSG00000064692|Q9Y6H5-6|SNCAIP	30.317721548370564	0.6322445173429027	3				NaN	NaN	0	NaN	5239	4145	9381
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9392	28.972	NaN	6346.5	30	0	966.87	0.214			+	26587	LTVEREPQA	9	61	521.7801004509774	1041.5456479687548	2	521.7803955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LTVEREPQA_	REV__ENST00000395340.5_1_20:61521863-61522052:-|nuORF	76.7741389293348	0.11149722112137898	3				NaN	NaN	0	NaN	5242	4148	9391
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9393	28.975	NaN	4808.1	30	0	653.84	0.106	+			27140	MATAQASPVI	10	62	494.75845561183297	987.502358290466	2	494.75836181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MATAQASPVI_	ENST00000449567.6_1_11:24518651-24807587:+|nuORF	44.377184641726394	0.5088115166961078	3				NaN	NaN	0	NaN	5243	4148	9391
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9394	28.977	NaN	2778.2	30	0	466.39	0.106			+	-1	QPWMRKGIQ	9	50	387.20498360260626	1158.5931214080188	3	387.2044677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_QPWM(Oxidation (M))RKGIQ_	REV__ENST00000591750.1_1_19:11346944-11347244:-|nuORF	26.69291269510374	0.5537881896960711	3				NaN	NaN	0	NaN	5244	4148	9391
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9395	28.979	NaN	4525.4	30	0	660.43	0.106				-1	 	0	69	537.3219240069511	1072.6292950807021	2	537.823486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5245	4148	9391
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9396	28.981	NaN	2004.5	30	0	108.02	0.106			+	9345	EINVNSVL	8	65	444.2456965082677	886.4768400833354	2	444.24493408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EINVNSVL_	REV__ENSG00000120708|ENST00000442011|TGFBI;REV__ENST00000506699.5_1_5:135382542-135383974:+|nuORF;REV__ENST00000515433.1_1_5:135382542-135382743:+|nuORF	54.776311868738084	0.5534952410049249	3				NaN	NaN	0	NaN	5246	4148	9391
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9397	28.983	NaN	1521	30	0	208.93	0.106	+			31560	QLNQEKLE	8	58	501.2666195759731	1000.5186862187462	2	501.2666931152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QLNQEKLE_	DRC1|p.W618Gfs*19|1|0.36|ENSG00000157856|chr2:26453477-26453477|C/-|frameshift_variant;ENSG00000157856|ENST00000288710|DRC1	55.50420428727701	0.5462892107279674	3				NaN	NaN	0	NaN	5247	4148	9391
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9398	28.985	NaN	1472.1	30	0	101.56	0.036			+	-1	KKEMTTLKL	9	63	554.3241912512669	1106.6338295693338	2	554.3239135742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_KKEM(Oxidation (M))TTLKL_	REV__ENST00000375614.6_1_11:111431100-111431226:+|nuORF	37.15910966729921	0.4535818937225704	3				NaN	NaN	0	NaN	5248	4148	9391
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9405	29.001	NaN	3351.3	30	0	427.07	0.214	+			43254	TEYETQVKV	9	66	548.7796090308931	1095.544665128586	2	548.7799072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEYETQVKV_	ENSG00000120948|ENST00000240185|TARDBP;nc|ENSG00000120948|Q13148-4|TARDBP	106.68306549817024	0.032382560583716295	3				NaN	NaN	0	NaN	5252	4151	9404
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9406	29.005	NaN	1129.2	30	0	146.46	0.106	+			29993	PPGPPGPPGH	10	47	455.2320690747641	908.4495852163283	2	455.23187255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PPGPPGPPGH_	COL4A3|p.E935Nfs*16|1|0.1|ENSG00000169031|chr2:227284263-227284263|G/-|frameshift_variant;COL5A2|p.L1390Ffs*17|1|0.31|ENSG00000204262|chr2:189035099-189035100|-/A|frameshift_variant;COL5A2|p.T1388Nfs*21|1|0.03|ENSG00000204262|chr2:189035106-189035107|-/CTGTGGT|frameshift_variant;COL9A3|p.P216Lfs*317|1|0.19|ENSG00000092758|chr20:62825828-62825828|C/-|frameshift_variant;COL9A3|p.P243Lfs*290|1|0.43|ENSG00000092758|chr20:62826243-62826243|C/-|frameshift_variant;ENSG00000092758|ENST00000649368|COL9A3;ENSG00000169031|ENST00000396578|COL4A3;ENSG00000204262|ENST00000374866|COL5A2;nc|ENSG00000169031|Q01955-2|COL4A3;nc|ENSG00000169031|Q01955-3|COL4A3;nc|ENSG00000169031|Q01955-4|COL4A3;nc|ENSG00000169031|Q01955-5|COL4A3	44.53106598305862	0.5073935772121767	3				NaN	NaN	0	NaN	5253	4151	9404
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9407	29.007	NaN	4882.8	30	0	889.94	0.106	+			14593	GTGALILQK	9	63	450.77943246435586	899.5443119955117	2	450.77880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTGALILQK_	ENSG00000149418|ENST00000278742|ST14	101.60071028292904	0.0375685401170269	3				NaN	NaN	0	NaN	5254	4151	9404
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9408	29.008	NaN	2762.6	30	0	368.36	0.106	+			42900	TEHINIHQL	9	67	552.7938040835584	1103.5730552339166	2	552.7931518554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TEHINIHQL_	ENSG00000180353|ENST00000314583|HCLS1;ENST00000481314.5_1_3:121363541-121379717:-|nuORF;ENST00000487290.5_1_3:121363549-121379717:-|nuORF;nc|ENSG00000180353|P14317-2|HCLS1	77.31757898189308	0.1091473830098891	3				NaN	NaN	0	NaN	5255	4151	9404
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9409	29.01	NaN	2026.8	30	0	613.98	0.106	+			15619	GVKVESEL	8	48	430.74007598353717	859.4655990338744	2	430.739990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GVKVESEL_	ENSG00000162676|ENST00000294702|GFI1	29.14955571784316	0.7342621283720113	3				NaN	NaN	0	NaN	5256	4151	9404
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9410	29.012	NaN	2502.6	30	0	333.18	0.106			+	38708	SSLAGPLWY	9	59	497.2531872620271	NaN	0	497.2534484863281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSLAGPLWY_	REV__ENST00000228928.11_1_12:113408122-113408299:+|nuORF	42.47446043378293	0.25855550551448697	3				NaN	NaN	0	NaN	5257	4151	9404
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9411	29.014	NaN	2041.2	30	0	295.95	0.038	+			25119	LLQDDFGIKPG	11	73	601.8223391592488	NaN	0	601.8222045898438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LLQDDFGIKPG_	ENSG00000243414|ENST00000427199|TICAM2;nc|ENSG00000243414|Q86XR7-2|TICAM2	34.08650109265054	0.41350691770670583	3				NaN	NaN	0	NaN	5258	4151	9404
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9417	29.028	NaN	7856.7	30	0	1336.9	0.214	+			29770	PHYVTLDG	8	72	451.22457456263203	900.4345961920641	2	451.22406005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PHYVTLDG_	ENSG00000275395|ENST00000616721|FCGBP;ENSG00000275395|ENST00000616721|FCGBP;FCGBP-ACSS2|1|fusion;FCGBP-ACSS2|1|fusion;FCGBP|p.R2087Q|1|0.33|ENSG00000275395|chr19:39893107-39893107|C/T|missense_variant;nc|ENSG00000275395|Q9Y6R7|FCGBP;nc|ENSG00000275395|Q9Y6R7|FCGBP;nc|ENSG00000275395|Q9Y6R7|FCGBP	71.37791200682192	0.3954169775488141	3				NaN	NaN	0	NaN	5261	4154	9416
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9418	29.032	NaN	4015.9	30	0	787.44	0.106	+			1924	AISDVIGNK	9	59	458.758952138529	915.5033513438581	2	458.75836181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AISDVIGNK_	ENSG00000089902|ENST00000262241|RCOR1	58.78195531508484	0.22376836668196862	3				NaN	NaN	0	NaN	5262	4154	9416
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9419	29.034	NaN	1552	30	0	524.97	0.033	+			41871	SVTHLHSI	8	47	447.24545270322074	892.4763524732415	2	447.2453918457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVTHLHSI_	ENSG00000135678|ENST00000551568|CPM	40.5726180659479	0.6527593143185008	3				NaN	NaN	0	NaN	5263	4154	9416
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9424	29.048	NaN	10161	30	0	838.19	0.214	+			35959	SEGRTFEM	8	82	478.7110669028128	955.4075808724256	2	478.7105407714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEGRTFEM_	ENSG00000136068|ENST00000295956|FLNB;ENST00000481470.5_1_3:58118395-58154450:+|nuORF;nc|ENSG00000136068|O75369-2|FLNB;nc|ENSG00000136068|O75369-3|FLNB;nc|ENSG00000136068|O75369-4|FLNB;nc|ENSG00000136068|O75369-5|FLNB;nc|ENSG00000136068|O75369-6|FLNB;nc|ENSG00000136068|O75369-7|FLNB;nc|ENSG00000136068|O75369-8|FLNB;nc|ENSG00000136068|O75369-9|FLNB	71.87747018426188	0.391254423828572	3				NaN	NaN	0	NaN	5265	4157	9423
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9425	29.051	NaN	2603.3	30	0	703.53	0.106	+			28451	NFFGLYCI	8	63	488.7318302554579	NaN	0	488.73199462890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NFFGLYCI_	ENSG00000012963|ENST00000013070|UBR7	49.21078951299608	1.7418937515398478	3				NaN	NaN	0	NaN	5266	4157	9423
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9426	29.053	NaN	4669.3	30	0	1594	0.038				-1	 	0	54	387.5176361825734	1159.5310791479203	3	387.5172424316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5267	4157	9423
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9431	29.068	NaN	4911.4	30	0	658.44	0.214	+			14024	GSGAFGTVYK	10	69	493.75054843210006	985.4865439310001	2	493.7503662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSGAFGTVYK_	ENSG00000141736|ENST00000269571|ERBB2;ENSG00000146648|ENST00000275493|EGFR;ENSG00000178568|ENST00000342788|ERBB4;ENST00000484594.5_1_2:212426591-213403254:-|nuORF;ENST00000583038.5_1_17:37872360-37881463:+|nuORF;ERBB4|p.H801Mfs*27|1|0.39|ENSG00000178568|chr2:211561989-211561989|G/-|frameshift_variant;ERBB4|p.N1177Mfs*27|1|0.33|ENSG00000178568|chr2:211384012-211384012|T/-|frameshift_variant;nc|ENSG00000141736|P04626-2|ERBB2;nc|ENSG00000141736|P04626-3|ERBB2;nc|ENSG00000141736|P04626-4|ERBB2;nc|ENSG00000141736|P04626-5|ERBB2;nc|ENSG00000141736|P04626-6|ERBB2;nc|ENSG00000178568|Q15303-2|ERBB4;nc|ENSG00000178568|Q15303-3|ERBB4;nc|ENSG00000178568|Q15303-4|ERBB4	78.26377905018397	0.20980573808910843	3				NaN	NaN	0	NaN	5269	4160	9430
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9432	29.071	NaN	4028.3	30	0	1022.3	0.106	+			49788	VYSGPIGTAI	10	56	489.26925319135063	976.5239534495013	2	489.26861572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYSGPIGTAI_	ENSG00000187616|ENST00000339996|MYMK	40.05817265558897	0.5486090488315611	3				NaN	NaN	0	NaN	5270	4160	9430
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9433	29.073	NaN	3346.2	30	0	386.49	0.106	+			51378	YTLDQTYAK	9	74	551.7746655349681	1101.5347781367361	2	551.7753295898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YTLDQTYAK_	ENSG00000198804|ENST00000361624|MT-CO1;ENST00000441633.2_1_X:125606231-125606297:+|nuORF	63.53385203322761	0.18415635464017938	3				NaN	NaN	0	NaN	5271	4160	9430
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9434	29.075	NaN	1253.1	30	0	82.991	0.106	+			27712	MQGGILFVY	9	62	514.267822265625	NaN	0	514.267822265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MQGGILFVY_	ENSG00000133805|ENST00000396553|AMPD3;nc|ENSG00000133805|Q01432-3|AMPD3;nc|ENSG00000133805|Q01432-4|AMPD3;nc|ENSG00000133805|Q01432-5|AMPD3;nc|ENSG00000133805|Q01432-6|AMPD3	33.51558372728122	0.30835390848773375	3				NaN	NaN	0	NaN	5272	4160	9430
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9435	29.077	NaN	1498.8	30	0	221.38	0.106			+	11904	FVAAMAAGAGR	11	54	511.2642118026576	NaN	0	511.26300048828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FVAAMAAGAGR_	REV__ENST00000530623.5_1_11:67195959-67196605:+|nuORF	58.78195531508484	0.2445488647199508	3				NaN	NaN	0	NaN	5273	4160	9430
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9436	29.079	NaN	1259.5	30	0	72.701	0.036				-1	LECISSTQE	9	57	533.7388663870926	NaN	0	533.7383422851562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_LEC(Carbamidomethyl (C))ISSTQE_	nc|ENSG00000168675|O15165-8|LDLRAD4	34.172542307311794	0.30503706118289736	3				NaN	NaN	0	NaN	5274	4160	9430
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9444	29.097	NaN	4389.6	30	0	2083.5	0.214	+			13581	GLVCLQSIT	9	65	495.7665720739124	989.5185912146248	2	495.7657470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GLVC(Carbamidomethyl (C))LQSIT_	ENSG00000165899|ENST00000547103|OTOGL;OTOGL|p.C2147Mfs*2|1|0.4|ENSG00000165899|chr12:80367723-80367724|-/A|frameshift_variant;OTOGL|p.K2146Nfs*40|2|0.16|ENSG00000165899|chr12:80367724-80367724|A/-|frameshift_variant	50.0245360154114	0.3026755932229825	3				NaN	NaN	0	NaN	5279	4163	9443
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9445	29.1	NaN	1256.5	30	0	109.5	0.106			+	8161	EAAKPGPAGPA	11	56	483.25669590908	NaN	0	483.2568054199219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EAAKPGPAGPA_	REV__ENSG00000129951|ENST00000520876|PLPPR3;REV__nc|ENSG00000129951|Q6T4P5-2|PLPPR3;REV__nc|ENSG00000129951|Q6T4P5-3|PLPPR3;REV__nc|ENSG00000129951|Q6T4P5-4|PLPPR3	44.377184641726394	0.3557038908013712	3				NaN	NaN	0	NaN	5280	4163	9443
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9446	29.102	NaN	1096.3	30	0	124.16	0.036				-1	LCFMLPKY	8	57	544.2688394189324	1086.5231259046648	2	544.2678833007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_LC(Carbamidomethyl (C))FM(Oxidation (M))LPKY_	ENST00000415772.5_1_7:72302228-72304559:+|nuORF;ENST00000490953.5_1_7:66456072-66459281:-|nuORF	21.70233525837049	0.7917639344264583	3				NaN	NaN	0	NaN	5281	4163	9443
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9453	29.118	NaN	12696	30	0	2378.9	0.214	+			36180	SELITKAV	8	63	430.7580360297684	859.5015191263368	2	430.7578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SELITKAV_	ENSG00000124575|ENST00000244534|H1-3;ENSG00000168298|ENST00000304218|H1-4;ENSG00000184357|ENST00000331442|H1-5;ENSG00000187837|ENST00000343677|H1-2	69.6276240434122	0.4100012001731381	3				NaN	NaN	0	NaN	5285	4166	9452
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9454	29.122	NaN	5672.2	30	0	487.3	0.106	+			17681	IEKQPPQVL	9	71	526.3111753300367	1050.6077977268733	2	526.3109741210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IEKQPPQVL_	ENSG00000126561|ENST00000590949|STAT5A;ENSG00000173757|ENST00000293328|STAT5B;ENST00000468312.1_1_17:40370167-40384145:-|nuORF;nc|ENSG00000126561|P42229-2|STAT5A;STAT5B|p.H584Tfs*8|3|0.33|ENSG00000173757|chr17:42210428-42210429|-/T|frameshift_variant;STAT5B|p.K583Nfs*16|2|0.34|ENSG00000173757|chr17:42210429-42210429|T/-|frameshift_variant	80.45461616416974	0.09558281504443908	3				NaN	NaN	0	NaN	5286	4166	9452
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9455	29.124	NaN	1482.3	30	0	115.72	0.106				-1	 	0	51	449.70627557813407	897.3979982230682	2	449.7058410644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5287	4166	9452
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9456	29.126	NaN	3850.3	30	0	839.7	0.106			+	22750	KVDPEMLEH	9	71	549.2670061142296	1096.5194592952591	2	549.2669677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KVDPEMLEH_	REV__CPZ|p.E240D|1|0.36|ENSG00000109625|chr4:8605999-8605999|G/T|missense_variant	40.77816245573522	0.41113185337114944	3				NaN	NaN	0	NaN	5288	4166	9452
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9457	29.128	NaN	2022.2	30	0	282.76	0.106	+			3306	ASLTAALAK	9	47	423.25875578582253	844.5029586384451	2	423.2581787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASLTAALAK_	ENSG00000197892|ENST00000524189|KIF13B;nc|ENSG00000197892|Q9NQT8-2|KIF13B	45.97224482568171	0.3502073465782774	3				NaN	NaN	0	NaN	5289	4166	9452
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9458	29.129	NaN	2202	30	0	199.93	0.106			+	18003	IICEHSRRGE	10	54	600.2995901514356	1198.5846273696711	2	600.2981567382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IICEHSRRGE_	REV__ENSG00000050165|ENST00000683431|DKK3	26.69291269510374	0.6618461711292317	3				NaN	NaN	0	NaN	5290	4166	9452
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9459	29.131	NaN	1836.8	30	0	299.86	0.036	+			9845	EPSIWTVDD	9	60	531.2435511281382	1060.4725493230762	2	531.2374877929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EPSIWTVDD_	ENSG00000173889|ENST00000495893|PHC3;nc|ENSG00000173889|Q8NDX5-2|PHC3;nc|ENSG00000173889|Q8NDX5|PHC3	47.91560031466742	0.327412564698279	3				NaN	NaN	0	NaN	5291	4166	9452
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9464	29.145	NaN	9890.7	30	0	1304.6	0.214	+			7128	DAARLQAAY	9	69	489.754116077386	977.493679221572	2	489.75396728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DAARLQAAY_	ENSG00000115306|ENST00000356805|SPTBN1;ENST00000496323.1_1_2:54880712-54887220:+|nuORF;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1	56.43379154798735	0.2433427591689151	3				NaN	NaN	0	NaN	5293	4169	9463
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9465	29.149	NaN	3013	30	0	614.15	0.106	+			3668	ASYPPFLF	8	54	471.241867094057	940.469181254914	2	471.24176025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASYPPFLF_	ENST00000426981.5_2_2:128396458-128396839:-|nuORF	44.53106598305862	0.628196326904373	3				NaN	NaN	0	NaN	5294	4169	9463
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9466	29.151	NaN	3831.6	30	0	848.59	0.106	+			10944	FDTQSKEKL	9	64	548.2882185497392	1094.5618841662783	2	548.2882080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FDTQSKEKL_	ENSG00000196998|ENST00000376372|WDR45;ENST00000480412.2_1_X:48933021-48933502:-|nuORF;nc|ENSG00000196998|Q9Y484-2|WDR45;nc|ENSG00000196998|Q9Y484-3|WDR45;WDR45|p.R218H|1|0.38|ENSG00000196998|chrX:49075617-49075617|C/T|missense_variant	49.44154591367651	0.3095138337212152	3				NaN	NaN	0	NaN	5295	4169	9463
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9467	29.153	NaN	2866.9	30	0	610.89	0.035	+			48217	VTATQLIQK	9	60	501.3033027398822	1000.5920525465644	2	501.302978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTATQLIQK_	ENSG00000198589|ENST00000651943|LRBA;LRBA|p.L2590*|1|0.41|ENSG00000198589|chr4:150310342-150310342|A/-|frameshift_variant;LRBA|p.T2011Qfs*11|1|0.19|ENSG00000198589|chr4:150599022-150599022|T/-|frameshift_variant;nc|ENSG00000198589|P50851-2|LRBA;nc|ENSG00000198589|P50851|LRBA	98.58198989935565	0.04066992115528678	3				NaN	NaN	0	NaN	5296	4169	9463
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9472	29.167	NaN	6396.4	30	0	827.46	0.214				-1	 	0	66	422.7139483744326	843.4133438156653	2	422.71356201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5298	4172	9471
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9473	29.17	NaN	2688.6	30	0	213.12	0.106	+			49645	VYIKHPVSL	9	70	528.3163152302692	1054.6180775273383	2	528.31640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYIKHPVSL_	ENSG00000099341|ENST00000215071|PSMD8;ENST00000592001.5_1_19:38865430-38871817:+|nuORF	58.78195531508484	0.22376836668196862	3				NaN	NaN	0	NaN	5299	4172	9471
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9474	29.172	NaN	4272.5	30	0	752.83	0.106	+			14785	GTLASSFAR	9	58	455.2424085783711	908.4702642235422	2	455.2427978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTLASSFAR_	ENST00000563117.5_1_16:20817227-20817782:-|nuORF;ENST00000565884.5_1_16:20817227-20817407:-|nuORF	90.60085204095205	0.06317133949006545	3				NaN	NaN	0	NaN	5300	4172	9471
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9475	29.174	NaN	2463	30	0	545.35	0.106			+	-1	AMKRKRHL	8	38	352.54669184084344	1054.6182461227304	3	352.54638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_AM(Oxidation (M))KRKRHL_	REV__C4BPA|p.G270Vfs*9|1|0.16|ENSG00000123838|chr1:207126809-207126809|A/-|frameshift_variant;REV__ENSG00000123838|ENST00000367070|C4BPA	24.20275056022122	0.7724576178584145	3				NaN	NaN	0	NaN	5301	4172	9471
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9476	29.176	NaN	3485.2	30	0	478.04	0.106			+	6629	AYSSPRLAAV	10	67	517.7847156237647	1033.5548783143292	2	517.78564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AYSSPRLAAV_	REV__ENSG00000234438|ENST00000432196|KBTBD13	37.50817390946774	0.5721060100277453	3				NaN	NaN	0	NaN	5302	4172	9471
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9477	29.178	NaN	2935	30	0	332.02	0.106	+			16928	HPMGGLNAM	9	60	464.2122261601546	926.4098993871092	2	464.21112060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HPMGGLNAM_	ENSG00000149187|ENST00000687097|CELF1;nc|ENSG00000149187|Q92879-2|CELF1;nc|ENSG00000149187|Q92879-3|CELF1;nc|ENSG00000149187|Q92879-4|CELF1;nc|ENSG00000149187|Q92879-5|CELF1;nc|ENSG00000149187|Q92879-6|CELF1;nc|ENSG00000149187|Q92879|CELF1	57.81127852772723	0.2318599694398087	3				NaN	NaN	0	NaN	5303	4172	9471
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9478	29.179	NaN	2788.8	30	0	355.86	0.033	+			24254	LETRGKAL	8	55	444.26843513777294	886.5223173423459	2	444.264404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LETRGKAL_	ENST00000571816.5_2_17:4843437-4843473:+|nuORF	82.30502934623384	0.30436709589983096	3				NaN	NaN	0	NaN	5304	4172	9471
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9484	29.196	NaN	8334.3	30	0	3423.7	0.214	+			16821	HPDQAQAIL	9	68	496.7621457896879	991.5097386461758	2	496.761474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HPDQAQAIL_	ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1	44.377184641726394	0.36891676396732553	3				NaN	NaN	0	NaN	5307	4175	9483
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9485	29.199	NaN	8566.2	30	0	3027.3	0.106			+	37874	SNTITPRI	8	59	451.2589954172927	900.5034379013854	2	451.25830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SNTITPRI_	REV__ENSG00000143341|ENST00000271588|HMCN1;REV__HMCN1|p.G3718Afs*6|1|0.04|ENSG00000143341|chr1:186113995-186113995|G/-|frameshift_variant;REV__HMCN1|p.L3491Hfs*10|1|0.12|ENSG00000143341|chr1:186095419-186095420|-/ATAT|frameshift_variant;REV__HMCN1|p.S4801Rfs*11|1|0.07|ENSG00000143341|chr1:186145536-186145537|-/AGAATAA|frameshift_variant;REV__HMCN1|p.Y2955Ifs*3|1|0.29|ENSG00000143341|chr1:186082933-186082934|-/A|frameshift_variant;REV__nc|ENSG00000143341|Q96RW7-2|HMCN1	87.75429964447693	0.2842685068779738	3				NaN	NaN	0	NaN	5308	4175	9483
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9486	29.201	NaN	9095.9	30	0	1228.9	0.106	+			11282	FKDMQMVF	8	73	531.2435511281382	1060.4725493230762	2	531.2430419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_FKDMQM(Oxidation (M))VF_	ENSG00000115464|ENST00000398571|USP34;nc|ENSG00000115464|Q70CQ2-2|USP34;nc|ENSG00000115464|Q70CQ2-3|USP34;USP34|p.L2716Sfs*30|1|0.05|ENSG00000115464|chr2:61214596-61214597|-/AAGCTGA|frameshift_variant;USP34|p.L3228*|1|0.22|ENSG00000115464|chr2:61190564-61190564|A/-|frameshift_variant	71.29570347882199	0.39610197767395533	3				NaN	NaN	0	NaN	5309	4175	9483
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9487	29.203	NaN	4300.2	30	0	495.22	0.106	+			16396	HEQGLSTAL	9	54	478.2459562417918	954.4773595503837	2	478.24542236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HEQGLSTAL_	ENSG00000134453|ENST00000379888|RBM17	51.19269402634007	0.2889735674168909	3				NaN	NaN	0	NaN	5310	4175	9483
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9488	29.205	NaN	5646.4	30	0	3479.1	0.106	+			25817	LSDDRKLKI	9	42	363.2208909007196	1086.640843302359	3	363.2203369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSDDRKLKI_	ENSG00000160271|ENST00000372050|RALGDS;ENST00000493438.5_1_9:135973976-135976008:-|nuORF;nc|ENSG00000160271|Q12967-3|RALGDS;nc|ENSG00000160271|Q12967-4|RALGDS;nc|ENSG00000160271|Q12967-5|RALGDS;nc|ENSG00000160271|Q12967-6|RALGDS	24.20275056022122	0.577060078256802	3				NaN	NaN	0	NaN	5311	4175	9483
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9489	29.206	NaN	3507.8	30	0	1065.5	0.106	+			48606	VTRGPATAT	9	56	437.24298770943426	872.4714224856685	2	437.24273681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTRGPATAT_	ENSG00000100106|ENST00000644935|TRIOBP;nc|ENSG00000100106|Q9H2D6-2|TRIOBP;nc|ENSG00000100106|Q9H2D6-3|TRIOBP;TRIOBP|p.L1770Qfs*47|1|0.09|ENSG00000100106|chr22:37741018-37741019|-/AGTGT|frameshift_variant	60.11826168202944	0.21262886028301267	3				NaN	NaN	0	NaN	5312	4175	9483
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9490	29.208	NaN	2099.9	30	0	1184.3	0.037	+			41517	SVPSSETVICR	11	50	589.2979566414211	1176.5813603496422	2	589.2977905273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVPSSETVICR_	ENSG00000155090|ENST00000285407|KLF10;nc|ENSG00000155090|Q13118-2|KLF10	33.921630207806714	0.6339809607503234	3				NaN	NaN	0	NaN	5313	4175	9483
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9497	29.225	NaN	13256	30	0	1980.8	0.143	+			3823	ATAIGMPVEK	10	73	508.77595235268376	1015.5373517721675	2	508.7760009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATAIGMPVEK_	ENSG00000109736|ENST00000355443|MFSD10;ENST00000509676.1_1_4:2934766-2935650:-|nuORF;MFSD10|p.S111Gfs*48|1|0.44|ENSG00000109736|chr4:2933125-2933147|GGGCGCCTCCCCAAGCAGTCAGA/-|frameshift_variant	120.30596017624542	0.026897611020491978	3				NaN	NaN	0	NaN	5317	4178	9496
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9502	29.241	NaN	905.77	30	0	94.273	0.214				-1	 	0	34	329.219645456827	656.424737980454	2	329.21905517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5319	4181	9501
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9503	29.245	NaN	2379.3	30	0	184.76	0.106	+			8946	EEYQRIYTT	9	61	601.7889643647428	1201.5633757962855	2	602.2893676757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EEYQRIYTT_	AHNAK|p.I657Nfs*25|1|0.36|ENSG00000124942|chr11:62532447-62532448|-/T|frameshift_variant;AHNAK|p.K2311Rfs*11|1|0.33|ENSG00000124942|chr11:62527487-62527487|G/-|frameshift_variant;AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;AHNAK|p.L2124Ifs*37|1|0.04|ENSG00000124942|chr11:62528048-62528049|-/ATGCCTGATA|frameshift_variant;AHNAK|p.S1888Qfs*8|1|0.11|ENSG00000124942|chr11:62528755-62528756|-/G|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK	87.75429964447693	0.0711966946989736	3				NaN	NaN	0	NaN	5320	4181	9501
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9504	29.246	NaN	1748.3	30	0	213.22	0.106			+	31094	QFNSDVRFK	9	64	570.7932813885637	NaN	0	570.7932739257812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QFNSDVRFK_	REV__ENST00000407775.6_1_8:106573614-106573692:+|nuORF	39.252832667884924	0.27938773122138094	3				NaN	NaN	0	NaN	5321	4181	9501
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9505	29.248	NaN	2281.1	30	0	199.94	0.036	+			10298	ETPMPPPLPP	10	58	538.2802177089445	1074.545882484689	2	538.2791137695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ETPMPPPLPP_	ENSG00000099995|ENST00000215793|SF3A1;nc|ENSG00000099995|Q15459-2|SF3A1;SF3A1|p.R642Afs*5|1|0.33|ENSG00000099995|chr22:30337717-30337717|G/-|frameshift_variant	35.61828744233558	0.588957954432594	3				NaN	NaN	0	NaN	5322	4181	9501
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9512	29.266	NaN	29923	30	0	2791.3	0.214	+			1621	AGMALGIQK	9	88	444.7523592684099	887.4901656036199	2	444.75201416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AGMALGIQK_	ENSG00000174851|ENST00000376901|YIF1A	148.20599733432147	0.007287282186870133	3				NaN	NaN	0	NaN	5326	4184	9511
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9513	29.269	NaN	5429.3	30	0	1503.3	0.106	+			19048	IYGSSHSW	8	62	468.7143395580029	935.4141261828058	2	468.7139892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IYGSSHSW_	DUOX1|p.S186N|1|0.29|ENSG00000137857|chr15:45135535-45135535|G/A|missense_variant;ENSG00000137857|ENST00000389037|DUOX1;ENSG00000140279|ENST00000389039|DUOX2;nc|ENSG00000140279|Q9NRD8|DUOX2	62.97842346883844	0.4722955155785405	3				NaN	NaN	0	NaN	5327	4184	9511
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9514	29.271	NaN	2735.7	30	0	216.99	0.106	+			45059	TVHGVTQAF	9	57	480.25069490380264	NaN	0	480.2505798339844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVHGVTQAF_	ENSG00000006015|ENST00000358607|REX1BD;ENST00000597371.1_1_19:18699887-18702987:+|nuORF;ENST00000598375.5_1_19:18699887-18701110:+|nuORF;ENST00000600997.5_1_19:18699887-18701744:+|nuORF;nc|ENSG00000006015|Q96EN9-2|REX1BD;nc|ENSG00000006015|Q96EN9-3|REX1BD	47.657333605630114	0.2228375344433429	3				NaN	NaN	0	NaN	5328	4184	9511
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9515	29.273	NaN	2147	30	0	527.81	0.106			+	37316	SLDRLKAPL	9	39	338.20955452905304	NaN	0	338.20953369140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLDRLKAPL_	REV__ENSG00000162496|ENST00000616661|DHRS3;REV__nc|ENSG00000162496|O75911-2|DHRS3	49.536043120802724	0.20989033510253738	3				NaN	NaN	0	NaN	5329	4184	9511
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9516	29.275	NaN	1652	30	0	164.29	0.036			+	50659	YEEDPRKY	8	62	550.2563258749002	1098.4980988166003	2	550.2571411132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YEEDPRKY_	REV__ENSG00000175105|ENST00000636215|ZNF654	45.9519527083369	0.6193794311207887	3				NaN	NaN	0	NaN	5330	4184	9511
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9524	29.293	NaN	3035.3	30	0	299.15	0.214			+	9185	EGQILRLLA	9	61	506.8120508488566	1011.6095487645132	2	506.8111267089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EGQILRLLA_	REV__ENSG00000056487|ENST00000313237|PHF21B;REV__nc|ENSG00000056487|Q96EK2-3|PHF21B;REV__nc|ENSG00000056487|Q96EK2-4|PHF21B	85.86182877749512	0.07653218437724067	3				NaN	NaN	0	NaN	5335	4187	9523
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9525	29.297	NaN	3341.3	30	0	355.22	0.106	+			42777	TEAETIQKL	9	72	516.7822671956816	NaN	0	516.7815551757812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEAETIQKL_	ENSG00000138768|ENST00000514213|USO1;nc|ENSG00000138768|O60763-2|USO1;USO1|p.I920Sfs*9|1|0.08|ENSG00000138768|chr4:75812332-75812333|-/GAGCTTT|frameshift_variant;USO1|p.K251*|2|0.26|ENSG00000138768|chr4:75782746-75782747|-/T|frameshift_variant;USO1|p.K919Tfs*8|1|0.08|ENSG00000138768|chr4:75812331-75812332|-/C|frameshift_variant	82.7504851949679	0.061958946529908215	3				NaN	NaN	0	NaN	5336	4187	9523
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9526	29.299	NaN	2557.4	30	0	213.97	0.106			+	2262	ALVNKLVGL	9	59	463.8052308432583	925.5959087533166	2	463.8050231933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ALVNKLVGL_	REV__ENSG00000110057|ENST00000227471|UNC93B1;REV__ENST00000530138.3_1_11:67766987-67771573:-|nuORF;REV__ENST00000533424.5_1_11:67770773-67771486:-|nuORF;REV__UNC93B1|p.A407Pfs*42|1|0.62|ENSG00000110057|chr11:67995755-67995755|C/-|frameshift_variant	33.51558372728122	0.4900267029546261	3				NaN	NaN	0	NaN	5337	4187	9523
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9527	29.3	NaN	1740.9	30	0	251.97	0.106	+			26263	LSTADGRVE	9	55	474.24375219361883	946.4729514540377	2	474.24322509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSTADGRVE_	ENSG00000146216|ENST00000259750|TTBK1;nc|ENSG00000146216|Q5TCY1-2|TTBK1;TTBK1|p.P669Hfs*4|1|0.1|ENSG00000146216|chr6:43282742-43282742|C/-|frameshift_variant	39.252832667884924	0.4290233611298554	3				NaN	NaN	0	NaN	5338	4187	9523
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9528	29.302	NaN	1968.3	30	0	223.29	0.106			+	13892	GRFLNILKR	9	43	372.9042744663779	NaN	0	372.90423583984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GRFLNILKR_	REV__ENSG00000122696|ENST00000242275|SLC25A51;REV__ENSG00000141437|ENST00000269205|SLC25A52;REV__SLC25A51|p.I285Hfs*7|1|0.38|ENSG00000122696|chr9:37887699-37887700|-/C|frameshift_variant	25.57405402267927	0.3484490411150625	3				NaN	NaN	0	NaN	5339	4187	9523
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9529	29.304	NaN	1429.1	30	0	148.66	0.106				-1	FLVFWFCL	8	40	377.8613387630144	1130.562186889243	3	377.8604736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_FLVFWFC(Carbamidomethyl (C))L_	ENSG00000182035|ENST00000537425|ADIG	44.53106598305862	0.628196326904373	3				NaN	NaN	0	NaN	5340	4187	9523
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9530	29.306	NaN	1557	30	0	215.2	0.035	+			14920	GTMAMTVVTK	10	56	519.769337985686	1037.5241230381719	2	519.7705688476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GTMAMTVVTK_	ENSG00000175115|ENST00000320580|PACS1;nc|ENSG00000175115|Q6VY07-2|PACS1	89.02883481214508	0.13663399911061233	3				NaN	NaN	0	NaN	5341	4187	9523
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9537	29.322	NaN	2102.7	30	0	925	0.214				-1	 	0	36	343.21731000215954	684.4200670711191	2	343.21722412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5345	4190	9536
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9538	29.326	NaN	6612.4	30	0	2110.6	0.035	+			13902	GRIAYISSK	9	42	332.1943348111659	993.5611750336977	3	332.194091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GRIAYISSK_	ENSG00000152270|ENST00000282096|PDE3B;nc|ENSG00000152270|Q13370-2|PDE3B	24.20275056022122	0.577060078256802	3				NaN	NaN	0	NaN	5346	4190	9536
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9543	29.34	NaN	5279.7	30	0	1128.3	0.213	+			32857	RCYYCNGPIL	10	72	601.2782371615424	1200.5419213898847	2	601.27783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RCYYCNGPIL_	ENSG00000089159|ENST00000637617|PXN;ENST00000323871.9_2_12:120650119-120654597:-|nuORF;nc|ENSG00000089159|P49023-2|PXN;nc|ENSG00000089159|P49023-3|PXN;nc|ENSG00000089159|P49023-4|PXN;nc|ENSG00000089159|P49023|PXN	35.61828744233558	0.588957954432594	3				NaN	NaN	0	NaN	5348	4193	9542
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9544	29.344	NaN	2258.1	30	0	292.49	0.106	+			7594	DISGLQRAV	9	56	479.77048475117016	957.5264165691403	2	479.7695617675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DISGLQRAV_	ENSG00000186642|ENST00000334456|PDE2A;ENST00000539367.5_1_11:72287653-72353469:-|nuORF;nc|ENSG00000186642|O00408-2|PDE2A;nc|ENSG00000186642|O00408-3|PDE2A;nc|ENSG00000186642|O00408-4|PDE2A;nc|ENSG00000186642|O00408-5|PDE2A;nc|ENSG00000186642|O00408-6|PDE2A;PDE2A|p.P98Hfs*53|1|0.29|ENSG00000186642|chr11:72605168-72605168|G/-|frameshift_variant	42.396135135203025	0.392153681582562	3				NaN	NaN	0	NaN	5349	4193	9542
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9545	29.345	NaN	2653.7	30	0	274.32	0.106	+			28144	NALAVSTKY	9	63	483.76510126016876	NaN	0	483.7654724121094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NALAVSTKY_	CLUH|p.D1252Tfs*5|1|0.42|ENSG00000132361|chr17:2690771-2690771|T/-|frameshift_variant;ENSG00000132361|ENST00000651024|CLUH;ENST00000572014.1_1_17:2595653-2597426:-|nuORF;ENST00000574210.5_1_17:2594901-2597328:-|nuORF;nc|ENSG00000132361|O75153|CLUH	51.52775601994872	0.19616436856719055	3				NaN	NaN	0	NaN	5350	4193	9542
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9546	29.347	NaN	1375.1	30	0	148.93	0.106	+			29994	PPGPPGPPGH	10	52	455.2319839180771	NaN	0	455.2323303222656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PPGPPGPPGH_	COL4A3|p.E935Nfs*16|1|0.1|ENSG00000169031|chr2:227284263-227284263|G/-|frameshift_variant;COL5A2|p.L1390Ffs*17|1|0.31|ENSG00000204262|chr2:189035099-189035100|-/A|frameshift_variant;COL5A2|p.T1388Nfs*21|1|0.03|ENSG00000204262|chr2:189035106-189035107|-/CTGTGGT|frameshift_variant;COL9A3|p.P216Lfs*317|1|0.19|ENSG00000092758|chr20:62825828-62825828|C/-|frameshift_variant;COL9A3|p.P243Lfs*290|1|0.43|ENSG00000092758|chr20:62826243-62826243|C/-|frameshift_variant;ENSG00000092758|ENST00000649368|COL9A3;ENSG00000169031|ENST00000396578|COL4A3;ENSG00000204262|ENST00000374866|COL5A2;nc|ENSG00000169031|Q01955-2|COL4A3;nc|ENSG00000169031|Q01955-3|COL4A3;nc|ENSG00000169031|Q01955-4|COL4A3;nc|ENSG00000169031|Q01955-5|COL4A3	35.200714571348534	0.3845941098745963	3				NaN	NaN	0	NaN	5351	4193	9542
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9547	29.349	NaN	1235.8	30	0	151.99	0.106			+	10333	ETSVHLQY	8	47	488.74085234576717	975.4671517583344	2	488.7402038574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ETSVHLQY_	REV__nc|ENSG00000134769|Q9Y4J8-15|DTNA	31.954861631926434	0.7126016770032289	3				NaN	NaN	0	NaN	5352	4193	9542
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9548	29.351	NaN	1622.8	30	0	341.73	0.106			+	8127	DYSRAAGRPF	10	37	380.5243259858888	NaN	0	380.5244140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DYSRAAGRPF_	REV__ENSG00000077454|ENST00000310300|LRCH4;REV__ENST00000485583.1_1_7:100179936-100183723:-|nuORF	30.317721548370564	0.4006274431774794	3				NaN	NaN	0	NaN	5353	4193	9542
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9549	29.353	NaN	1782	30	0	335.9	0.035			+	26623	LVAHLPATSV	10	36	336.53440004144954	1006.5813707245486	3	336.5337219238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LVAHLPATSV_	REV__nc|ENSG00000258366|Q9NZ71-2|RTEL1	24.20275056022122	0.6821818413321409	3				NaN	NaN	0	NaN	5354	4193	9542
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9553	29.367	NaN	1080.9	30	0	86.568	0.214	+			46136	VDLSPKGV	8	45	407.73751729189945	813.4604816505989	2	407.7371826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VDLSPKGV_	tr|U7ST72|U7ST72_FUSNU2,3-bisphosphoglycerate-dependentphosphoglyceratemutaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=gpmAPE=3SV=1	56.72105179125745	0.5342425954139568	3				NaN	NaN	0	NaN	5355	4196	9552
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9554	29.37	NaN	1461.7	30	0	152.48	0.106			+	44499	TSSLSPVTL	9	54	452.75276305932545	903.4909731854509	2	452.7520446777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TSSLSPVTL_	REV__ENSG00000112769|ENST00000230538|LAMA4;REV__nc|ENSG00000112769|Q16363-2|LAMA4;REV__nc|ENSG00000112769|Q16363|LAMA4	60.97194046774394	0.20551255781574032	3				NaN	NaN	0	NaN	5356	4196	9552
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9555	29.372	NaN	1185	30	0	143.16	0.038			+	7419	DENPYHKKY	9	56	597.2823331016662	NaN	0	597.2821655273438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DENPYHKKY_	REV__ENSG00000006576|ENST00000416283|PHTF2;REV__ENST00000454592.5_1_7:77538159-77567164:+|nuORF;REV__nc|ENSG00000006576|Q8N3S3-2|PHTF2;REV__nc|ENSG00000006576|Q8N3S3-3|PHTF2;REV__nc|ENSG00000006576|Q8N3S3-4|PHTF2;REV__nc|ENSG00000006576|Q8N3S3-7|PHTF2;REV__PHTF2|p.A375T|1|0.15|ENSG00000006576|chr7:77929112-77929112|G/A|missense_variant;REV__PHTF2|p.K694Nfs*13|1|0.06|ENSG00000006576|chr7:77949795-77949795|A/-|frameshift_variant;REV__PHTF2|p.K719Rfs*4|1|0.07|ENSG00000006576|chr7:77951653-77951653|A/-|frameshift_variant;REV__PHTF2|p.L570Ffs*10|1|0.25|ENSG00000006576|chr7:77940263-77940264|-/T|frameshift_variant	34.172542307311794	0.30503706118289736	3				NaN	NaN	0	NaN	5357	4196	9552
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9562	29.389	NaN	2652.9	30	0	507.37	0.214				-1	 	0	40	336.22773651770757	670.4409201022152	2	336.22747802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5361	4199	9561
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9563	29.392	NaN	3941.5	30	0	287.33	0.106			+	22104	KSNCSSLSMGF	11	75	580.7572952725016	1159.500037611803	2	580.7587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KSNCSSLSMGF_	REV__ENST00000580335.1_1_18:67624287-67624371:-|nuORF	51.19269402634007	0.4047928213175833	3				NaN	NaN	0	NaN	5362	4199	9561
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9564	29.394	NaN	1159.9	30	0	96.647	0.106	+			43266	TFAYHKDMP	9	53	555.2571716050976	1108.499790276995	2	555.2561645507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TFAYHKDMP_	ENSG00000169902|ENST00000304842|TPST1;TPST1|p.F162Lfs*3|1|0.44|ENSG00000169902|chr7:66240908-66240908|T/-|frameshift_variant	27.882242232435846	0.5426732730940306	3				NaN	NaN	0	NaN	5363	4199	9561
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9565	29.396	NaN	1530	30	0	284.7	0.106			+	33477	RIVYSLEK	8	50	504.2977833331231	NaN	0	504.29608154296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RIVYSLEK_	REV__ENST00000459872.1_1_6:10557103-10619499:+|nuORF;REV__nc|ENSG00000111846|Q8N0V5-2|GCNT2	51.33545320467046	1.7418937515398478	3				NaN	NaN	0	NaN	5364	4199	9561
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9566	29.398	NaN	1988.5	30	0	211.77	0.035			+	8854	EEPFASENQ	9	58	525.72265625	NaN	0	525.72265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EEPFASENQ_	REV__ENSG00000150722|ENST00000682840|PPP1R1C;REV__ENST00000494189.1_1_2:182968515-182982019:+|nuORF;REV__nc|ENSG00000150722|Q8WVI7-2|PPP1R1C	39.252832667884924	0.27938773122138094	3				NaN	NaN	0	NaN	5365	4199	9561
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9574	29.416	NaN	7491.4	30	0	710.13	0.213	+			40602	SVAHLYSNLTK	11	76	616.8357385515634	1231.6569241699267	2	616.8353881835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVAHLYSNLTK_	ENSG00000101986|ENST00000218104|ABCD1;ENSG00000173208|ENST00000308666|ABCD2	60.11826168202944	0.32239947305776	3				NaN	NaN	0	NaN	5370	4202	9573
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9575	29.419	NaN	3432.5	30	0	1294.2	0.106	+			10616	EYNINDKKI	9	65	568.8011933505474	1135.5878337678946	2	568.8010864257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EYNINDKKI_	tr|U7ST45|U7ST45_FUSNUOrganicsolventtolerance-likeN-terminaldomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01283PE=4SV=1	87.69643885390035	0.07135982304947239	3				NaN	NaN	0	NaN	5371	4202	9573
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9576	29.421	NaN	4169.7	30	0	433.98	0.106	+			11687	FREQSECMI	9	51	381.50402600210583	1141.4902486065175	3	381.50347900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FREQSECMI_	ENSG00000142606|ENST00000378412|MMEL1;nc|ENSG00000142606|Q495T6-3|MMEL1	37.15910966729921	0.4535818937225704	3				NaN	NaN	0	NaN	5372	4202	9573
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9577	29.423	NaN	2416.4	30	0	263.38	0.106			+	20231	KELRYPGVY	9	62	562.8089374361052	1123.6033219390104	2	562.8089599609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KELRYPGVY_	REV__BRSK1|p.G116Vfs*8|1|0.14|ENSG00000160469|chr19:55289504-55289504|G/-|frameshift_variant;REV__BRSK2|p.A13T|1|0.3|ENSG00000174672|chr11:1390321-1390321|G/A|missense_variant;REV__BRSK2|p.P580Qfs*55|2|0.16|ENSG00000174672|chr11:1456410-1456410|G/-|frameshift_variant;REV__BRSK2|p.R355Gfs*4|2|0.39|ENSG00000174672|chr11:1445650-1445650|C/-|frameshift_variant;REV__BRSK2|p.T24M|1|0.43|ENSG00000174672|chr11:1390355-1390355|C/T|missense_variant;REV__ENSG00000160469|ENST00000309383|BRSK1;REV__ENSG00000174672|ENST00000528841|BRSK2;REV__nc|ENSG00000160469|Q8TDC3-2|BRSK1;REV__nc|ENSG00000160469|Q8TDC3-3|BRSK1;REV__nc|ENSG00000174672|Q8IWQ3-2|BRSK2;REV__nc|ENSG00000174672|Q8IWQ3-3|BRSK2;REV__nc|ENSG00000174672|Q8IWQ3-4|BRSK2	47.95952297671804	0.32689736945648856	3				NaN	NaN	0	NaN	5373	4202	9573
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9578	29.425	NaN	1399.2	30	0	123.29	0.106	+			50798	YEQAARVAI	9	52	510.77648723173405	NaN	0	510.7767333984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YEQAARVAI_	ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5	42.86426827375447	0.2558691296974908	3				NaN	NaN	0	NaN	5374	4202	9573
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9579	29.427	NaN	2082.4	30	0	249.16	0.106	+			474	AAVSTHVAL	9	53	434.7480953252515	867.481637717303	2	434.7479248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AAVSTHVAL_	ENSG00000163501|ENST00000295731|IHH;IHH|p.E379Rfs*18|2|0.25|ENSG00000163501|chr2:219055308-219055308|C/-|frameshift_variant;IHH|p.Q386Sfs*11|1|0.4|ENSG00000163501|chr2:219055287-219055287|G/-|frameshift_variant	55.50420428727701	0.2510918378945873	3				NaN	NaN	0	NaN	5375	4202	9573
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9580	29.429	NaN	3807.9	30	0	567.12	0.035			+	28627	NKVRQPFR	8	67	522.8058406703942	1043.5971284075883	2	522.8065185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NKVRQPFR_	REV__ENSG00000113083|ENST00000231004|LOX;REV__ENSG00000129038|ENST00000261921|LOXL1;REV__ENST00000508067.1_2_5:121406451-121411196:-|nuORF;REV__ENST00000513319.5_1_5:121402440-121412860:-|nuORF;REV__ENST00000566011.5_1_15:74234368-74244175:+|nuORF;REV__LOXL1|p.G430C|1|0.35|ENSG00000129038|chr15:73946493-73946493|G/T|missense_variant	35.61828744233558	0.6843154725607303	3				NaN	NaN	0	NaN	5376	4202	9573
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9587	29.445	NaN	5462.7	30	0	1083.4	0.214	+			4950	ATQSFSTFR	9	72	522.7591983049384	1043.5038436766768	2	522.7593994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATQSFSTFR_	ENSG00000044090|ENST00000265348|CUL7;nc|ENSG00000044090|Q14999-2|CUL7	63.42647028704847	0.1850514934184437	3				NaN	NaN	0	NaN	5380	4205	9586
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9588	29.449	NaN	2273.6	30	0	230.87	0.106	+			46891	VIPTNVPELT	10	64	541.810046545428	1081.605540157656	2	541.8113403320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VIPTNVPELT_	ENSG00000133895|ENST00000450708|MEN1;MEN1|p.R521Gfs*43|3|0.32|ENSG00000133895|chr11:64804621-64804621|G/-|frameshift_variant;nc|ENSG00000133895|O00255-1|MEN1;nc|ENSG00000133895|O00255-3|MEN1	44.377184641726394	0.5088115166961078	3				NaN	NaN	0	NaN	5381	4205	9586
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9589	29.451	NaN	2123.2	30	0	315.01	0.106	+			38717	SSLDVSLQK	9	59	488.7694420145398	975.5243310958796	2	488.7684326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSLDVSLQK_	CENPJ|p.L906*|1|0.48|ENSG00000151849|chr13:24904034-24904034|A/-|frameshift_variant;ENSG00000151849|ENST00000381884|CENPJ;nc|ENSG00000151849|Q9HC77-2|CENPJ	63.53385203322761	0.18415635464017938	3				NaN	NaN	0	NaN	5382	4205	9586
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9590	29.452	NaN	1936.5	30	0	340.31	0.035			+	8735	EEEVVIQY	8	56	504.74576086851414	1007.4769688038283	2	504.74560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EEEVVIQY_	REV__ENSG00000173482|ENST00000580170|PTPRM;REV__nc|ENSG00000173482|P28827|PTPRM;REV__PTPRM|p.R629C|1|0.61|ENSG00000173482|chr18:8113514-8113514|C/T|missense_variant	45.9519527083369	0.6193794311207887	3				NaN	NaN	0	NaN	5383	4205	9586
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9597	29.469	NaN	2963	30	0	406.62	0.214			+	25371	LPGRPHHGPG	10	55	512.7750763215148	1023.5355997098296	2	512.77490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LPGRPHHGPG_	REV__TNK2|p.L888Cfs*83|1|0.6|ENSG00000061938|chr3:195867591-195867591|G/-|frameshift_variant	47.91560031466742	0.4762067885998563	3				NaN	NaN	0	NaN	5387	4208	9596
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9598	29.472	NaN	3640.2	30	0	411.68	0.106	+			17015	HPTSVISGY	9	60	480.7438238925983	959.4730948519966	2	480.74273681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HPTSVISGY_	ENSG00000120438|ENST00000321394|TCP1;ENST00000412860.1_1_7:42834686-42835559:+|nuORF;TCP1|p.A232Gfs*7|1|0.05|ENSG00000120438|chr6:159784043-159784044|-/C|frameshift_variant	65.80317337860623	0.1652391959156183	3				NaN	NaN	0	NaN	5388	4208	9596
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9599	29.474	NaN	4745.9	30	0	1966.6	0.106	+			30412	PWISSFWGL	9	42	364.85533640634776	1091.5441798192433	3	364.8547668457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PWISSFWGL_	ENSG00000176900|ENST00000322049|OR51T1	37.15910966729921	0.4535818937225704	3				NaN	NaN	0	NaN	5389	4208	9596
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9600	29.476	NaN	1029.6	30	0	91.483	0.106				-1	QCASALGLGCY	11	55	571.7528046653315	1141.491056397463	2	571.7528686523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_QC(Carbamidomethyl (C))ASALGLGCY_	ENST00000483071.1_1_3:50326655-50327355:-|nuORF	31.529811441608018	0.6590691889962369	3				NaN	NaN	0	NaN	5390	4208	9596
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9601	29.478	NaN	1819.6	30	0	143.15	0.106	+			17682	IEKQPPQVL	9	62	526.3111753300367	1050.6077977268733	2	526.3109130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IEKQPPQVL_	ENSG00000126561|ENST00000590949|STAT5A;ENSG00000173757|ENST00000293328|STAT5B;ENST00000468312.1_1_17:40370167-40384145:-|nuORF;nc|ENSG00000126561|P42229-2|STAT5A;STAT5B|p.H584Tfs*8|3|0.33|ENSG00000173757|chr17:42210428-42210429|-/T|frameshift_variant;STAT5B|p.K583Nfs*16|2|0.34|ENSG00000173757|chr17:42210429-42210429|T/-|frameshift_variant	77.31757898189308	0.1091473830098891	3				NaN	NaN	0	NaN	5391	4208	9596
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9602	29.479	NaN	1865.4	30	0	229.25	0.106			+	19168	IYRPGPNL	8	52	465.2657802693328	928.5170076054657	2	465.2637939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IYRPGPNL_	REV__ENSG00000162687|ENST00000294725|KCNT2;REV__ENST00000498426.5_1_1:196286396-196434478:-|nuORF;REV__ENST00000610076.1_1_1:196227273-196577439:-|nuORF;REV__nc|ENSG00000162687|Q6UVM3-2|KCNT2;REV__nc|ENSG00000162687|Q6UVM3-3|KCNT2;REV__nc|ENSG00000162687|Q6UVM3-4|KCNT2	35.200714571348534	0.6875396545722289	3				NaN	NaN	0	NaN	5392	4208	9596
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9603	29.481	NaN	1880.7	30	0	252.93	0.036	+			1433	AEYGPQGRAF	10	59	548.2649497540972	1094.5153465749943	2	548.2644653320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AEYGPQGRAF_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	40.77816245573522	0.5419747034533848	3				NaN	NaN	0	NaN	5393	4208	9596
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9607	29.495	NaN	6885.5	30	0	801.8	0.214	+			19138	IYNGKVTSI	9	70	497.7809984555914	993.5474439779828	2	497.7821350097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IYNGKVTSI_	ENSG00000067596|ENST00000262415|DHX8;ENST00000587044.1_1_17:41568567-41594747:+|nuORF	109.47833844074708	0.029530294723441826	3				NaN	NaN	0	NaN	5394	4211	9606
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9608	29.499	NaN	2058.2	30	0	130.29	0.106				-1	RPASMYSTGK	10	45	371.8497069589357	1112.527291477007	3	371.8495788574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_RPASM(Oxidation (M))YSTGK_	ENSG00000109654|ENST00000338700|TRIM2;nc|ENSG00000109654|Q9C040|TRIM2;TRIM2|p.V492*|1|0.15|ENSG00000109654|chr4:153315525-153315525|G/-|frameshift_variant	36.446750945000026	0.5818864909973037	3				NaN	NaN	0	NaN	5395	4211	9606
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9609	29.501	NaN	1493.7	30	0	156	0.106				-1	GLAEQCAGIR	10	46	358.8515319824219	NaN	0	358.8515319824219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_GLAEQC(Carbamidomethyl (C))AGIR_	ENSG00000111276|ENST00000228872|CDKN1B	23.52269567125451	0.42010282974921537	3				NaN	NaN	0	NaN	5396	4211	9606
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9610	29.503	NaN	1312.9	30	0	114.07	0.106			+	18984	IVSLMHHF	8	57	492.2617901971847	982.5090274611695	2	492.26116943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IVSLMHHF_	REV__NCAPD3|p.Q302H|1|0.25|ENSG00000151503|chr11:134206709-134206709|T/G|missense_variant	46.76643321282427	0.6143254112625767	3				NaN	NaN	0	NaN	5397	4211	9606
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9611	29.504	NaN	1225.2	30	0	203.64	0.106			+	26417	LTFNECIYF	9	46	575.2661200417422	1148.5176871502842	2	575.2656860351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LTFNECIYF_	REV__ENSG00000128815|ENST00000325239|WDFY4;REV__nc|ENSG00000128815|Q6ZS81-4|WDFY4;REV__nc|ENSG00000128815|Q6ZS81-5|WDFY4	21.9598887501803	0.5980208138527809	3				NaN	NaN	0	NaN	5398	4211	9606
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9612	29.506	NaN	1251.6	30	0	362.46	0.04			+	-1	DDRCICSNGMT	11	54	672.7528017927336	1343.4910506522672	2	672.7523803710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Carbamidomethyl (C),Oxidation (M)	_DDRC(Carbamidomethyl (C))IC(Carbamidomethyl (C))SNGM(Oxidation (M))T_	REV__ENSG00000159579|ENST00000394420|RSPRY1;REV__ENST00000566352.1_1_16:57238570-57238921:+|nuORF;REV__nc|ENSG00000159579|Q96DX4-2|RSPRY1	22.579656572578934	0.7529490144093228	3				NaN	NaN	0	NaN	5399	4211	9606
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9618	29.521	NaN	6445.4	30	0	2450.1	0.214	+			27011	LYRAALET	8	60	468.76125501540935	935.5079570976187	2	468.76068115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LYRAALET_	ENSG00000144028|ENST00000323853|SNRNP200;nc|ENSG00000144028|O75643-2|SNRNP200	50.0245360154114	0.5941082100236891	3				NaN	NaN	0	NaN	5402	4214	9617
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9619	29.525	NaN	2294	30	0	491.73	0.106			+	-1	RCLFGAVR	8	58	489.7688225709532	977.5230922087064	2	489.76861572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_RC(Carbamidomethyl (C))LFGAVR_	REV__ENST00000372462.1_1_1:43826534-43826797:+|nuORF	30.503639358989545	0.7238069182250283	3				NaN	NaN	0	NaN	5403	4214	9617
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9620	29.527	NaN	2065.3	30	0	205.89	0.106			+	24162	LELSLNAL	8	54	436.7582508283044	871.5019487234089	2	436.7578430175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LELSLNAL_	REV__ENSG00000143341|ENST00000271588|HMCN1;REV__HMCN1|p.G3718Afs*6|1|0.04|ENSG00000143341|chr1:186113995-186113995|G/-|frameshift_variant;REV__HMCN1|p.L3491Hfs*10|1|0.12|ENSG00000143341|chr1:186095419-186095420|-/ATAT|frameshift_variant;REV__HMCN1|p.S4801Rfs*11|1|0.07|ENSG00000143341|chr1:186145536-186145537|-/AGAATAA|frameshift_variant;REV__HMCN1|p.V1339Gfs*22|1|0.42|ENSG00000143341|chr1:186000186-186000186|T/-|frameshift_variant;REV__HMCN1|p.Y2955Ifs*3|1|0.29|ENSG00000143341|chr1:186082933-186082934|-/A|frameshift_variant;REV__nc|ENSG00000143341|Q96RW7-2|HMCN1	60.97194046774394	0.49215940876911696	3				NaN	NaN	0	NaN	5404	4214	9617
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9621	29.528	NaN	2937.4	30	0	401.49	0.106	+			48178	VTADGALAMEK	11	70	553.2816503778713	1104.5487478225425	2	553.28173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTADGALAMEK_	ENSG00000058085|ENST00000264144|LAMC2;nc|ENSG00000058085|Q13753-2|LAMC2	73.84112541714126	0.20371746787051248	3				NaN	NaN	0	NaN	5405	4214	9617
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9622	29.53	NaN	3137	30	0	262.27	0.106			+	-1	YRCRKGRK	8	72	562.3166613152343	1122.6187696972686	2	562.3165283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_YRC(Carbamidomethyl (C))RKGRK_	REV__ENSG00000135482|ENST00000257940|ZC3H10;REV__ZC3H10|p.P217Lfs*24|1|0.42|ENSG00000135482|chr12:56121207-56121207|C/-|frameshift_variant	35.200714571348534	0.6875396545722289	3				NaN	NaN	0	NaN	5406	4214	9617
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9623	29.532	NaN	1630.6	30	0	139.44	0.106			+	21785	KQTRDLNSAAI	11	53	608.8361384576632	1215.6577239821263	2	608.8358154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KQTRDLNSAAI_	REV__ENST00000482270.5_1_22:31668491-31671520:+|nuORF	25.06778042989391	0.7268506242977556	3				NaN	NaN	0	NaN	5407	4214	9617
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9624	29.534	NaN	2167.3	30	0	217.67	0.035			+	30748	QDLTHKLY	8	59	509.27276309582254	1016.5309732584451	2	509.2742614746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QDLTHKLY_	REV__ARHGAP1|p.L237Cfs*135|2|0.38|ENSG00000175220|chr11:46680674-46680674|G/-|frameshift_variant;REV__ARHGAP1|p.L237Rfs*135|1|0.37|ENSG00000175220|chr11:46680673-46680673|A/-|frameshift_variant;REV__ENSG00000175220|ENST00000311956|ARHGAP1	35.61828744233558	0.6843154725607303	3				NaN	NaN	0	NaN	5408	4214	9617
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9629	29.548	NaN	9860.5	30	0	3815.9	0.214			+	-1	EECPVCEEY	9	73	579.2098925546258	1156.4052321760514	2	579.210205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_EECPVC(Carbamidomethyl (C))EEY_	REV__ENSG00000099139|ENST00000674117|PCSK5;REV__nc|ENSG00000099139|Q92824|PCSK5	40.5726180659479	0.4135428067754104	3				NaN	NaN	0	NaN	5410	4217	9628
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9630	29.551	NaN	7858.7	30	0	1811.7	0.106			+	17000	HPSVEEKLTY	10	71	601.8067560024466	1201.5989590716931	2	601.806396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HPSVEEKLTY_	REV__tr|U7SU31|U7SU31_FUSNUATP-dependentdethiobiotinsynthetaseBioDOS=FusobacteriumnucleatumCTI-5OX=1316586GN=bioDPE=3SV=1	67.49366992349736	0.29779660154124327	3				NaN	NaN	0	NaN	5411	4217	9628
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9631	29.553	NaN	2781.2	30	0	392.04	0.106	+			44775	TTQITYHQ	8	59	496.24589507256474	990.4772372119295	2	496.2457580566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TTQITYHQ_	ACSS2|p.F518Sfs*17|1|0.05|ENSG00000131069|chr20:34923327-34923334|TCAAGCAG/-|frameshift_variant;ACSS2|p.P269Qfs*69|1|0.38|ENSG00000131069|chr20:34914403-34914403|C/-|frameshift_variant;ACSS2|p.V143I|1|0.31|ENSG00000131069|chr20:34913148-34913148|G/A|missense_variant;ENSG00000131069|ENST00000360596|ACSS2;ENST00000481284.5_1_20:33462930-33515014:+|nuORF;nc|ENSG00000131069|Q9NR19-2|ACSS2	37.15910966729921	0.6739408393984688	3				NaN	NaN	0	NaN	5412	4217	9628
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9632	29.555	NaN	3124.6	30	0	433.37	0.106			+	46076	VCRPEAQL	8	56	458.23832982572117	914.4621067182424	2	458.739501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VCRPEAQL_	REV__ENSG00000178921|ENST00000314666|PFAS	51.33545320467046	0.5859736979383976	3				NaN	NaN	0	NaN	5413	4217	9628
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9633	29.557	NaN	1569.8	30	0	247.72	0.106				-1	FKDMQMVF	8	60	531.2435511281382	1060.4725493230762	2	531.2432250976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_FKDMQM(Oxidation (M))VF_	ENSG00000115464|ENST00000398571|USP34;nc|ENSG00000115464|Q70CQ2-2|USP34;nc|ENSG00000115464|Q70CQ2-3|USP34;USP34|p.L2716Sfs*30|1|0.05|ENSG00000115464|chr2:61214596-61214597|-/AAGCTGA|frameshift_variant;USP34|p.L3228*|1|0.22|ENSG00000115464|chr2:61190564-61190564|A/-|frameshift_variant	37.15910966729921	0.6739408393984688	3				NaN	NaN	0	NaN	5414	4217	9628
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9634	29.559	NaN	2148.2	30	0	147.05	0.106			+	28386	NELKKLPE	8	56	485.78242607863405	969.5502992240681	2	485.78155517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NELKKLPE_	REV__ANP32A|p.S104N|1|0.37|ENSG00000140350|chr15:68787429-68787429|C/T|missense_variant;REV__ENSG00000139223|ENST00000266594|ANP32D;REV__ENSG00000140350|ENST00000465139|ANP32A;REV__ENST00000483551.6_1_15:69072422-69081590:-|nuORF	54.776311868738084	0.5534952410049249	3				NaN	NaN	0	NaN	5415	4217	9628
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9635	29.56	NaN	1715.5	30	0	226.33	0.036			+	18702	ITECLMYIV	9	50	542.7752075195312	NaN	0	542.7752075195312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ITECLMYIV_	REV__ENSG00000212128|ENST00000390677|TAS2R13	32.81241826257853	0.3119040447479903	3				NaN	NaN	0	NaN	5416	4217	9628
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9641	29.577	NaN	16091	30	0	5880.9	0.214	+			19195	IYTSSVNRL	9	69	526.7904674499706	1051.5663819667411	2	526.7909545898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IYTSSVNRL_	ENSG00000184432|ENST00000333188|COPB2;nc|ENSG00000184432|P35606-2|COPB2	141.52041321563706	0.009766778904176347	3				NaN	NaN	0	NaN	5419	4220	9640
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9642	29.58	NaN	2882.9	30	0	395.08	0.106	+			50504	YANIGKTL	8	58	440.25061585094517	878.4866787686904	2	440.2500915527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YANIGKTL_	ENSG00000115841|ENST00000354545|RMDN2;ENST00000440353.5_1_2:38177721-38224681:+|nuORF;nc|ENSG00000115841|Q96LZ7-2|RMDN2;nc|ENSG00000115841|Q96LZ7-3|RMDN2;nc|ENSG00000115841|Q96LZ7-4|RMDN2;RMDN2|p.F331Efs*33|1|0.12|ENSG00000115841|chr2:37997459-37997462|TGTT/-|frameshift_variant	65.46538089061403	0.44767499471257033	3				NaN	NaN	0	NaN	5420	4220	9640
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9643	29.582	NaN	2690.9	30	0	275.48	0.106	+			9554	ELESEPVI	8	59	458.23832982572117	914.4621067182424	2	458.73944091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ELESEPVI_	ENSG00000068781|ENST00000394754|STON1-GTF2A1L;ENSG00000243244|ENST00000404752|STON1;nc|ENSG00000243244|Q9Y6Q2-2|STON1;nc|ENSG00000243244|Q9Y6Q2-3|STON1	42.47446043378293	0.6409579893742323	3				NaN	NaN	0	NaN	5421	4220	9640
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9644	29.584	NaN	3259.1	30	0	497.52	0.106	+			38465	SSASALTGLTK	11	65	518.2880858752724	1034.5616188173447	2	518.287841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSASALTGLTK_	ENSG00000164880|ENST00000404767|INTS1;INTS1|p.Q467Afs*140|1|0.05|ENSG00000164880|chr7:1498439-1498440|-/A|frameshift_variant;INTS1|p.R843Pfs*31|1|0.39|ENSG00000164880|chr7:1487438-1487439|-/G|frameshift_variant	82.83050618871818	0.12877585057862004	3				NaN	NaN	0	NaN	5422	4220	9640
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9645	29.586	NaN	1584.8	30	0	176.6	0.106			+	-1	CITLVICVASA	11	55	575.3046324481054	1148.5947119630107	2	575.30419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_C(Carbamidomethyl (C))ITLVICVASA_	REV__ENSG00000188910|ENST00000373366|GJB3;REV__GJB3|p.G226Vfs*42|1|0.2|ENSG00000188910|chr1:34785435-34785435|G/-|frameshift_variant	42.86426827375447	0.5187511139693657	3				NaN	NaN	0	NaN	5423	4220	9640
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9646	29.588	NaN	2511.9	30	0	322.53	0.034			+	6751	CDRLGLAPV	9	59	472.25552785490095	942.4965027766019	2	472.2546081542969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_CDRLGLAPV_	REV__ENST00000434817.5_1_1:2487240-2488091:+|nuORF	39.252832667884924	0.4290233611298554	3				NaN	NaN	0	NaN	5424	4220	9640
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9650	29.602	NaN	4769.1	30	0	939.44	0.214				-1	 	0	66	493.7672856695895	985.520018405979	2	493.76678466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5425	4223	9649
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9651	29.605	NaN	3211.9	30	0	259.65	0.106	+			27396	MKNQQSSSL	9	68	511.75051296335596	1021.4864729935119	2	511.75048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MKNQQSSSL_	ENSG00000129566|ENST00000262715|TEP1;ENST00000557314.5_1_14:20839728-20850189:-|nuORF;nc|ENSG00000129566|Q99973-2|TEP1;TEP1|p.V1856Lfs*45|3|0.41|ENSG00000129566|chr14:20378179-20378179|C/-|frameshift_variant	58.22992032128504	0.22837015374068087	3				NaN	NaN	0	NaN	5426	4223	9649
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9652	29.607	NaN	1924.1	30	0	210.1	0.106	+			2036	AKQTLISV	8	61	430.26597923204673	858.5174055308935	2	430.26531982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AKQTLISV_	ENSG00000094975|ENST00000263688|SUCO;nc|ENSG00000094975|Q9UBS9-2|SUCO	37.81151784470057	0.6698925118251505	3				NaN	NaN	0	NaN	5427	4223	9649
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9653	29.609	NaN	2232.3	30	0	1312.9	0.106			+	74	AAAVLGPHP	9	39	416.7377614451106	831.4609699570212	2	416.73712158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AAAVLGPHP_	REV__ENSG00000152192|ENST00000377208|POU4F1;REV__nc|ENSG00000152192|Q01851-2|POU4F1	21.70233525837049	0.6004277881119521	3				NaN	NaN	0	NaN	5428	4223	9649
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9654	29.611	NaN	3079	30	0	547.61	0.106			+	22322	KTFQTLVGT	9	59	497.7809984555914	993.5474439779828	2	498.77703857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KTFQTLVGT_	REV__ENSG00000086570|ENST00000261800|FAT2;REV__FAT2|p.D4043Tfs*8|1|0.1|ENSG00000086570|chr5:151507544-151507544|C/-|frameshift_variant;REV__FAT2|p.P2377Qfs*41|1|0.34|ENSG00000086570|chr5:151543997-151543997|G/-|frameshift_variant;REV__FAT2|p.V3716Ffs*44|1|0.22|ENSG00000086570|chr5:151521447-151521447|C/-|frameshift_variant;REV__FAT2|p.Y3462Tfs*16|1|0.37|ENSG00000086570|chr5:151525891-151525891|G/-|frameshift_variant	27.882242232435846	0.5426732730940306	3				NaN	NaN	0	NaN	5429	4223	9649
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9655	29.612	NaN	1694.8	30	0	119.57	0.106	+			1622	AGMALGIQK	9	63	444.7523592684099	887.4901656036199	2	444.7521667480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AGMALGIQK_	ENSG00000174851|ENST00000376901|YIF1A	63.30626980617807	0.18605348971131092	3				NaN	NaN	0	NaN	5430	4223	9649
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9656	29.614	NaN	1897	30	0	479.06	0.036			+	7951	DSLYKRKY	8	63	536.7908119070596	1071.5670708809191	2	536.79150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DSLYKRKY_	REV__ENSG00000241399|ENST00000259053|CD302;REV__nc|ENSG00000054219|O60449-2|LY75;REV__nc|ENSG00000054219|O60449-3|LY75;REV__nc|ENSG00000241399|Q8IX05-2|CD302	30.503639358989545	0.7238069182250283	3				NaN	NaN	0	NaN	5431	4223	9649
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9663	29.631	NaN	6079.5	30	0	597.22	0.214	+			16372	HENEDIYKL	9	72	580.7831477408272	1159.5517425484543	2	580.782958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HENEDIYKL_	ENSG00000102753|ENST00000261667|KPNA3;ENSG00000186432|ENST00000334256|KPNA4	109.47833844074708	0.029530294723441826	3				NaN	NaN	0	NaN	5435	4226	9662
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9664	29.634	NaN	1612.6	30	0	342.65	0.106				-1	MDTASHSL	8	51	452.19542429259565	NaN	0	452.1954345703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))MDTASHSL_	DSG2|p.N864D|1|0.41|ENSG00000046604|chr18:31545976-31545976|A/G|missense_variant;ENSG00000089775|ENST00000608382|ZBTB25;ZBTB25|p.E245Gfs*4|1|0.2|ENSG00000089775|chr14:64487497-64487498|-/C|frameshift_variant	35.200714571348534	1.7418937515398478	3				NaN	NaN	0	NaN	5436	4226	9662
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9665	29.636	NaN	4625.6	30	0	691.43	0.106	+			19049	IYGSSHSW	8	55	468.7143395580029	935.4141261828058	2	468.7135314941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IYGSSHSW_	DUOX1|p.S186N|1|0.29|ENSG00000137857|chr15:45135535-45135535|G/A|missense_variant;ENSG00000137857|ENST00000389037|DUOX1;ENSG00000140279|ENST00000389039|DUOX2;nc|ENSG00000140279|Q9NRD8|DUOX2	44.53106598305862	0.628196326904373	3				NaN	NaN	0	NaN	5437	4226	9662
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9666	29.638	NaN	1591.5	30	0	180.99	0.106			+	23538	LAKALISGA	9	43	422.26866008059017	842.5227672279804	2	422.2680358886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LAKALISGA_	REV__ENSG00000154134|ENST00000397801|ROBO3;REV__nc|ENSG00000154134|Q96MS0-2|ROBO3;REV__ROBO3|p.D1059Tfs*9|1|0.29|ENSG00000154134|chr11:124878121-124878121|G/-|frameshift_variant	23.04248740728303	0.5879033540491928	3				NaN	NaN	0	NaN	5438	4226	9662
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9667	29.64	NaN	1743.2	30	0	663.36	0.106	+			12225	GASDVVLYK	9	45	476.26109594331734	950.5076389534347	2	476.2605895996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GASDVVLYK_	ENSG00000116120|ENST00000281828|FARSB;FARSB|p.I265*|1|0.36|ENSG00000116120|chr2:222630168-222630168|T/-|frameshift_variant;FARSB|p.I364Nfs*7|1|0.04|ENSG00000116120|chr2:222624353-222624354|-/AACACTCCTTATTG|frameshift_variant	45.97224482568171	0.3502073465782774	3				NaN	NaN	0	NaN	5439	4226	9662
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9668	29.642	NaN	2116.1	30	0	156.48	0.106	+			699	AEALVSKGL	9	65	444.26383819882227	886.5131234644446	2	444.2629089355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEALVSKGL_	ENSG00000197157|ENST00000354725|SND1;GAS2L3-SND1|1|fusion;SND1|p.A514Qfs*156|1|0.37|ENSG00000197157|chr7:127929195-127929195|A/-|frameshift_variant	61.691277971877994	0.19951612995419254	3				NaN	NaN	0	NaN	5440	4226	9662
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9669	29.643	NaN	1989.1	30	0	252.39	0.036	+			33345	RHDRVRDN	8	63	534.2775268554688	NaN	0	534.2775268554688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RHDRVRDN_	ENSG00000196497|ENST00000354464|IPO4;ENST00000558780.5_2_14:24649650-24651621:-|nuORF;nc|ENSG00000196497|Q8TEX9-2|IPO4	25.57405402267927	1.7418937515398478	3				NaN	NaN	0	NaN	5441	4226	9662
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9675	29.658	NaN	2006.1	30	0	205.26	0.214			+	27164	MCVLQIKM	8	59	483.25270638786577	964.4908598425316	2	483.25213623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MCVLQIKM_	REV__ENSG00000133636|ENST00000256010|NTS	50.0245360154114	0.5941082100236891	3				NaN	NaN	0	NaN	5444	4229	9674
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9676	29.662	NaN	2558.5	30	0	364.84	0.106	+			38466	SSASALTGLTK	11	67	518.2880858752724	1034.5616188173447	2	518.2880249023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSASALTGLTK_	ENSG00000164880|ENST00000404767|INTS1;INTS1|p.Q467Afs*140|1|0.05|ENSG00000164880|chr7:1498439-1498440|-/A|frameshift_variant;INTS1|p.R843Pfs*31|1|0.39|ENSG00000164880|chr7:1487438-1487439|-/G|frameshift_variant	35.17822180527639	0.6208003396870814	3				NaN	NaN	0	NaN	5445	4229	9674
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9677	29.663	NaN	2773.6	30	0	535.16	0.106	+			23860	LDEGAKLLY	9	64	511.28200517811945	1020.5494574230389	2	511.28173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LDEGAKLLY_	ENSG00000022556|ENST00000448584|NLRP2;ENST00000381637.3_1_19:55501058-55501561:+|nuORF;ENST00000540597.5_1_19:55476735-55501561:+|nuORF;nc|ENSG00000022556|Q9NX02-2|NLRP2;nc|ENSG00000022556|Q9NX02-3|NLRP2;nc|ENSG00000022556|Q9NX02-4|NLRP2;nc|ENSG00000022556|Q9NX02-5|NLRP2;NLRP2|p.N1038Tfs*4|2|0.38|ENSG00000022556|chr19:55000816-55000816|A/-|frameshift_variant	60.97194046774394	0.20551255781574032	3				NaN	NaN	0	NaN	5446	4229	9674
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9678	29.665	NaN	1539.4	30	0	135.54	0.106				-1	DRMACGLGGKL	11	65	568.7830879624705	1135.551622991741	2	568.782470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_DRM(Oxidation (M))ACGLGGKL_	ENSG00000065150|ENST00000651721|IPO5;ENST00000470493.1_1_13:98645409-98652946:+|nuORF;nc|ENSG00000065150|O00410-2|IPO5;nc|ENSG00000065150|O00410-3|IPO5	41.42661286455405	0.5384226294179143	3				NaN	NaN	0	NaN	5447	4229	9674
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9679	29.667	NaN	3042.8	30	0	228.36	0.106	+			50408	YAAQASQAL	9	56	461.73530118091196	921.4560494286239	2	461.735595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YAAQASQAL_	ENSG00000118705|ENST00000237530|RPN2;ENST00000462163.1_1_20:35807747-35832332:+|nuORF;RPN2|p.G196Afs*41|1|0.12|ENSG00000118705|chr20:37204794-37204794|G/-|frameshift_variant	90.60085204095205	0.06317133949006545	3				NaN	NaN	0	NaN	5448	4229	9674
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9680	29.669	NaN	1833.8	30	0	182.54	0.106			+	18072	IKETCMKY	8	64	536.7615356445312	NaN	0	536.7615356445312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_IKETC(Carbamidomethyl (C))MKY_	REV__ENSG00000064961|ENST00000333651|HMG20B;REV__ENST00000483417.1_1_19:3575543-3576359:+|nuORF;REV__ENST00000486028.1_1_19:3574329-3575756:+|nuORF;REV__ENST00000488973.6_1_19:3574329-3578516:+|nuORF;REV__nc|ENSG00000064961|Q9P0W2-2|HMG20B;REV__nc|ENSG00000064961|Q9P0W2-3|HMG20B	42.396135135203025	1.7418937515398478	3				NaN	NaN	0	NaN	5449	4229	9674
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9681	29.671	NaN	1628	30	0	167.61	0.036	+			18267	IPENRVVSY	9	64	538.7905655277372	NaN	0	538.7911987304688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IPENRVVSY_	ENSG00000106178|ENST00000222902|CCL24	47.657333605630114	0.2228375344433429	3				NaN	NaN	0	NaN	5450	4229	9674
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9686	29.685	NaN	3970.5	30	0	1319.1	0.214	+			14214	GSSGSFYLK	9	55	473.23774639493433	944.4609398566687	2	473.23687744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSSGSFYLK_	ENSG00000129422|ENST00000693296|MTUS1;ENST00000518975.1_1_8:17566427-17579410:-|nuORF;nc|ENSG00000129422|Q9ULD2-2|MTUS1;nc|ENSG00000129422|Q9ULD2-6|MTUS1	44.377184641726394	0.36891676396732553	3				NaN	NaN	0	NaN	5452	4232	9685
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9687	29.688	NaN	2722.1	30	0	178.47	0.106	+			17717	IENGKVVSI	9	60	479.7824704149224	957.5503878966448	2	479.7817077636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IENGKVVSI_	ENSG00000176658|ENST00000318217|MYO1D	56.43379154798735	0.2433427591689151	3				NaN	NaN	0	NaN	5453	4232	9685
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9688	29.69	NaN	2462.3	30	0	308.61	0.106			+	2865	ASAPLSAAPPL	11	56	497.7809984555914	993.5474439779828	2	498.77716064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASAPLSAAPPL_	REV__ENSG00000187634|ENST00000616016|SAMD11;REV__SAMD11|p.S218Qfs*4|1|0.46|ENSG00000187634|chr1:939401-939402|-/C|frameshift_variant	37.81151784470057	0.5878881669006212	3				NaN	NaN	0	NaN	5454	4232	9685
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9689	29.692	NaN	1405.9	30	0	159.87	0.106			+	45967	VASVEEQKHR	10	60	591.8124372485801	1181.61032156396	2	591.8118896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VASVEEQKHR_	REV__SCN8A|p.R1892H|1|0.11|ENSG00000196876|chr12:51807161-51807161|G/A|missense_variant	31.529811441608018	0.6223461015008678	3				NaN	NaN	0	NaN	5455	4232	9685
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9690	29.694	NaN	1420.9	30	0	233.53	0.106	+			25524	LPTENVDKM	9	59	523.7631967403308	1045.5118405474616	2	523.7638549804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LPTENVDKM_	ENSG00000198420|ENST00000479870|TCAF1;ENST00000392900.3_1_7:143551228-143582358:-|nuORF;ENST00000414990.2_3_7:143295168-143301929:+|nuORF;nc|ENSG00000198420|Q9Y4C2-2|TCAF1	27.047317107675042	0.5504760921104335	3				NaN	NaN	0	NaN	5456	4232	9685
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9691	29.696	NaN	1346.4	30	0	169.14	0.106			+	27288	MGLREALIE	9	61	516.2799357602627	1030.5453185873253	2	516.781005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MGLREALIE_	REV__tr|U7SNB1|U7SNB1_FUSNURNApolymerasesigmafactorSigAOS=FusobacteriumnucleatumCTI-5OX=1316586GN=sigAPE=3SV=1	29.14955571784316	0.5308295550522326	3				NaN	NaN	0	NaN	5457	4232	9685
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9692	29.697	NaN	1725.9	30	0	156.57	0.035			+	-1	SLMNRMIR	8	65	518.7708740234375	NaN	0	518.7708740234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_SLMNRM(Oxidation (M))IR_	REV__ENSG00000181852|ENST00000345093|RNF41;REV__ENST00000548225.1_1_12:56604079-56607800:-|nuORF;REV__RNF41|p.C291Lfs*2|1|0.06|ENSG00000181852|chr12:56206531-56206532|-/A|frameshift_variant	33.51558372728122	1.7418937515398478	3				NaN	NaN	0	NaN	5458	4232	9685
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9700	29.716	NaN	1697.4	30	0	271.26	0.214			+	31307	QIKMGVTSN	9	57	489.25602371241274	NaN	0	489.25555419921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QIKMGVTSN_	REV__ENSG00000153531|ENST00000612156|ADPRHL1;REV__nc|ENSG00000153531|Q8NDY3|ADPRHL1	45.97224482568171	0.23445038899310136	3				NaN	NaN	0	NaN	5463	4235	9699
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9701	29.719	NaN	2118	30	0	287.87	0.106	+			10543	EYAGNVIRS	9	59	504.758500770577	NaN	0	504.7585144042969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EYAGNVIRS_	ENSG00000118058|ENST00000534358|KMT2A;ENST00000525408.1_1_11:118390286-118392884:+|nuORF;nc|ENSG00000118058|Q03164-2|KMT2A;nc|ENSG00000118058|Q03164|KMT2A	34.172542307311794	0.30503706118289736	3				NaN	NaN	0	NaN	5464	4235	9699
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9702	29.721	NaN	2105	30	0	866.45	0.036				-1	SYVACTTEK	9	63	529.7452278803273	1057.4759028274545	2	529.7450561523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SYVAC(Carbamidomethyl (C))TTEK_	ENSG00000257093|ENST00000536163|DENND11	34.172542307311794	0.4838870758800184	3				NaN	NaN	0	NaN	5465	4235	9699
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9707	29.735	NaN	5994.2	30	0	2014.8	0.214				-1	 	0	56	439.26108010524587	876.5076072772918	2	439.2605895996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5467	4238	9706
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9708	29.739	NaN	2804	30	0	327.97	0.106	+			37033	SIQVVVVQK	9	60	500.31409453614253	998.6136361390851	2	500.313720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SIQVVVVQK_	ENSG00000197702|ENST00000334956|PARVA;ENST00000533345.5_1_11:12419899-12534890:+|nuORF	78.26377905018397	0.10505600812668463	3				NaN	NaN	0	NaN	5468	4238	9706
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9709	29.741	NaN	3789.3	30	0	491.33	0.106	+			46815	VIALAGLPPS	10	57	469.28969403640394	936.5648351396079	2	469.28936767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VIALAGLPPS_	ENSG00000158553|ENST00000444565|POM121L2;POM121L2|p.D642Gfs*77|1|0.06|ENSG00000158553|chr6:27310248-27310249|-/TACAATTCCT|frameshift_variant;POM121L2|p.P496Qfs*17|1|0.14|ENSG00000158553|chr6:27310684-27310684|G/-|frameshift_variant	29.14955571784316	0.6417842315402807	3				NaN	NaN	0	NaN	5469	4238	9706
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9710	29.743	NaN	2345.4	30	0	425.16	0.106			+	30096	PRCGRSPPSF	10	62	552.272649707358	1102.530746481516	2	552.272216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PRCGRSPPSF_	REV__ENST00000376499.7_2_9:84303978-84304179:-|nuORF	32.81241826257853	0.6118718159329168	3				NaN	NaN	0	NaN	5470	4238	9706
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9711	29.744	NaN	1931.4	30	0	306.28	0.106			+	11308	FKTTSNNNL	9	55	519.7643204415297	NaN	0	519.7652587890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FKTTSNNNL_	REV__CON__P13717	39.252832667884924	0.27938773122138094	3				NaN	NaN	0	NaN	5471	4238	9706
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9712	29.746	NaN	1540.7	30	0	177.36	0.106	+			11193	FHFMLVDLS	9	56	554.7774560351361	1107.540359137072	2	554.776123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FHFMLVDLS_	nc|ENSG00000196470|Q8IUQ4-3|SIAH1	33.51558372728122	0.4900267029546261	3				NaN	NaN	0	NaN	5472	4238	9706
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9713	29.748	NaN	1834.4	30	0	250.22	0.035				-1	MCILHTVY	8	58	511.24705032091344	1020.4795477086269	2	511.2489318847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))MCILHTVY_	ENST00000462683.5_1_X:67752068-67752146:+|nuORF	60.403631409065575	0.49778558673058804	3				NaN	NaN	0	NaN	5473	4238	9706
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9718	29.762	NaN	9481.3	30	0	1203.6	0.214	+			6024	AVMEMMSQK	9	73	527.7400711641944	1053.4655893951888	2	527.740966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVMEMMSQK_	ENSG00000123349|ENST00000334478|PFDN5;ENST00000552341.5_1_12:53691573-53693126:+|nuORF;nc|ENSG00000123349|Q99471-3|PFDN5	90.60085204095205	0.06317133949006545	3				NaN	NaN	0	NaN	5475	4241	9717
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9719	29.766	NaN	1364.8	30	0	275.13	0.106	+			25884	LSGALQPAPGA	11	57	491.2712478082451	NaN	0	491.2716064453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSGALQPAPGA_	ENST00000494893.5_1_2:27594167-27597059:+|nuORF	42.86426827375447	0.36657022113551535	3				NaN	NaN	0	NaN	5476	4241	9717
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9720	29.768	NaN	1706	30	0	261.52	0.106			+	-1	TVKSSCSQL	9	58	505.2514973003486	1008.4884416674972	2	505.25128173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_TVKSSC(Carbamidomethyl (C))SQL_	REV__ENSG00000140525|ENST00000310775|FANCI;REV__ENST00000566895.5_1_15:89821926-89825160:+|nuORF;REV__nc|ENSG00000140525|Q9NVI1-1|FANCI;REV__nc|ENSG00000140525|Q9NVI1-2|FANCI	44.377184641726394	0.36891676396732553	3				NaN	NaN	0	NaN	5477	4241	9717
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9721	29.77	NaN	2402.5	30	0	257.27	0.106	+			40474	STWEGIQAGK	10	57	538.77238736781	1075.5302218024199	2	538.7717895507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STWEGIQAGK_	ENSG00000177156|ENST00000319006|TALDO1;ENST00000530119.5_1_11:747481-760254:+|nuORF;ENST00000533796.1_1_11:755745-760254:+|nuORF;nc|ENSG00000177156|P37837-2|TALDO1	40.05817265558897	0.5486090488315611	3				NaN	NaN	0	NaN	5478	4241	9717
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9722	29.771	NaN	2243.9	30	0	601.55	0.106	+			15731	GVSAAFAVK	9	45	425.24533985048384	848.4761267677677	2	425.2444763183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GVSAAFAVK_	BZW1|p.L189P|1|0.05|ENSG00000082153|chr2:200818001-200818001|T/C|missense_variant;BZW1|p.N285Tfs*11|2|0.26|ENSG00000082153|chr2:200818782-200818782|A/-|frameshift_variant;BZW1|p.N286*|1|0.04|ENSG00000082153|chr2:200818790-200818791|-/T|frameshift_variant;BZW1|p.S325Rfs*19|1|0.04|ENSG00000082153|chr2:200819989-200819990|-/ACAATATAGAA|frameshift_variant;ENSG00000082153|ENST00000409600|BZW1;nc|ENSG00000082153|Q7L1Q6-2|BZW1;nc|ENSG00000082153|Q7L1Q6-3|BZW1;nc|ENSG00000082153|Q7L1Q6-4|BZW1	76.7741389293348	0.11149722112137898	3				NaN	NaN	0	NaN	5479	4241	9717
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9723	29.773	NaN	1687.9	30	0	294.75	0.039	+			50196	WLRQRPTIGL	10	48	413.91481261894586	NaN	0	413.8774108886719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_WLRQRPTIGL_	ENSG00000187122|ENST00000266058|SLIT1;nc|ENSG00000187122|O75093-2|SLIT1;SLIT1|p.D1462Tfs*42|1|0.21|ENSG00000187122|chr10:97001333-97001333|C/-|frameshift_variant	23.52269567125451	0.42010282974921537	3				NaN	NaN	0	NaN	5480	4241	9717
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9729	29.789	NaN	2301.4	30	0	214.13	0.214	+			50842	YETQVKVM	8	58	499.2545474409377	NaN	0	499.2546081542969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YETQVKVM_	ENSG00000120948|ENST00000240185|TARDBP;nc|ENSG00000120948|Q13148-4|TARDBP	66.42927471994793	1.7418937515398478	3				NaN	NaN	0	NaN	5483	4244	9728
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9730	29.793	NaN	1905	30	0	174.56	0.106	+			49784	VYRQDCETF	9	64	580.7565697600802	1159.4985865869603	2	580.757080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYRQDCETF_	ENSG00000134283|ENST00000358314|PPHLN1;nc|ENSG00000134283|Q8NEY8-2|PPHLN1;nc|ENSG00000134283|Q8NEY8-3|PPHLN1;nc|ENSG00000134283|Q8NEY8-6|PPHLN1;nc|ENSG00000134283|Q8NEY8-9|PPHLN1;nc|ENSG00000134283|Q8NEY8|PPHLN1;PPHLN1|p.D323Ifs*4|1|0.17|ENSG00000134283|chr12:42441367-42441367|A/-|frameshift_variant	37.81151784470057	0.4459294069877048	3				NaN	NaN	0	NaN	5484	4244	9728
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9731	29.795	NaN	1911.5	30	0	170.11	0.106			+	-1	ERAGLCLV	8	51	459.24761878105994	916.4806846289199	2	459.2470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_ERAGLC(Carbamidomethyl (C))LV_	REV__ENST00000250894.8_2_16:1818305-1818896:+|nuORF	47.91560031466742	0.6071945918984287	3				NaN	NaN	0	NaN	5485	4244	9728
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9732	29.797	NaN	1983.8	30	0	349.2	0.106	+			624	ADVKQVKV	8	56	443.7720080304558	885.5294631277117	2	443.7713317871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ADVKQVKV_	ENSG00000185565|ENST00000490035|LSAMP	55.50420428727701	0.5462892107279674	3				NaN	NaN	0	NaN	5486	4244	9728
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9733	29.798	NaN	1318.3	30	0	301.1	0.106	+			31995	QRGQLLRH	8	37	336.534320313154	NaN	0	336.5343017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QRGQLLRH_	ENSG00000197362|ENST00000491431|ZNF786;nc|ENSG00000197362|Q8N393-2|ZNF786	26.79610172149135	1.7418937515398478	3				NaN	NaN	0	NaN	5487	4244	9728
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9734	29.8	NaN	1762.3	30	0	536.1	0.106			+	24405	LGAGLFPAGP	10	52	450.2508236866351	NaN	0	450.2511901855469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LGAGLFPAGP_	REV__ENST00000315422.8_1_11:64577237-64577864:-|nuORF	35.200714571348534	0.3845941098745963	3				NaN	NaN	0	NaN	5488	4244	9728
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9735	29.802	NaN	2860.9	30	0	301.44	0.033	+			458	AAVLRSAAL	9	54	436.2718557668213	870.5291586004427	2	436.2713623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AAVLRSAAL_	ENSG00000167741|ENST00000381550|GGT6;nc|ENSG00000167741|Q6P531-2|GGT6;nc|ENSG00000167741|Q6P531|GGT6	62.107414245175825	0.1960472003779324	3				NaN	NaN	0	NaN	5489	4244	9728
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9741	29.817	NaN	7080.9	30	0	667.02	0.215	+			23155	KVYGHNVI	8	63	465.2657802693328	928.5170076054657	2	465.2669982910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVYGHNVI_	ENSG00000239474|ENST00000284669|KLHL41;KLHL41|p.R586Qfs*9|1|0.09|ENSG00000239474|chr2:169525631-169525632|-/AAATGTG|frameshift_variant;nc|ENSG00000239474|O60662-2|KLHL41	40.5726180659479	0.6527593143185008	3				NaN	NaN	0	NaN	5492	4247	9740
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9742	29.82	NaN	5901.5	30	0	907.74	0.106			+	-1	SLGKVTIQC	9	69	503.2719402123377	1004.5293274914754	2	503.2721252441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SLGKVTIQC(Carbamidomethyl (C))_	REV__ENSG00000156256|ENST00000399976|USP16;REV__ENST00000474835.5_1_21:30400234-30414894:+|nuORF;REV__nc|ENSG00000156256|Q9Y5T5-2|USP16;REV__nc|ENSG00000156256|Q9Y5T5-3|USP16;REV__nc|ENSG00000156256|Q9Y5T5-5|USP16	98.62937762414208	0.04060045538121712	3				NaN	NaN	0	NaN	5493	4247	9740
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9743	29.822	NaN	2388.7	30	0	604.74	0.106			+	19742	KDVKNGSVI	9	63	480.2788261315124	958.5430993298248	2	480.2800598144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KDVKNGSVI_	REV__tr|U7T1K9|U7T1K9_FUSNUFlavinreductaselikedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00852PE=3SV=1	54.776311868738084	0.25715957988447635	3				NaN	NaN	0	NaN	5494	4247	9740
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9744	29.824	NaN	1290.4	30	0	475.86	0.106	+			30427	PYGSPGAPGI	10	46	458.2321476915457	NaN	0	458.2325134277344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PYGSPGAPGI_	COL28A1|p.D436Ifs*2|1|0.26|ENSG00000215018|chr7:7456109-7456109|C/-|frameshift_variant;COL28A1|p.N938Mfs*12|1|0.15|ENSG00000215018|chr7:7373093-7373093|T/-|frameshift_variant;COL28A1|p.V898Wfs*18|1|0.41|ENSG00000215018|chr7:7373215-7373215|T/-|frameshift_variant;ENSG00000215018|ENST00000399429|COL28A1;nc|ENSG00000215018|Q2UY09-2|COL28A1	30.503639358989545	0.4000169810673414	3				NaN	NaN	0	NaN	5495	4247	9740
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9745	29.826	NaN	1913.7	30	0	207.56	0.035	+			12599	GEHLKTDLL	9	58	513.2853149382265	1024.556076943253	2	513.7874755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GEHLKTDLL_	ENSG00000100345|ENST00000216181|MYH9;MYH9|p.I784*|1|0.07|ENSG00000100345|chr22:36304036-36304036|G/-|frameshift_variant;nc|ENSG00000100345|P35579-2|MYH9	47.95952297671804	0.32689736945648856	3				NaN	NaN	0	NaN	5496	4247	9740
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9751	29.842	NaN	2200.7	30	0	379.26	0.214			+	-1	TRCLSTSSW	9	62	570.2619189223243	1138.5092849114485	2	570.2627563476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))TRC(Carbamidomethyl (C))LSTSSW_	REV__ENST00000398469.5_1_17:39784628-39785465:-|nuORF	35.61828744233558	0.47037581924408073	3				NaN	NaN	0	NaN	5499	4250	9750
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9752	29.845	NaN	3359.4	30	0	475.88	0.106	+			49277	VVQEPGQVFK	10	68	565.8142220285933	1129.6138911239866	2	566.3173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVQEPGQVFK_	ENSG00000169180|ENST00000304658|XPO6;ENST00000570007.1_1_16:28117306-28117714:-|nuORF;nc|ENSG00000169180|Q96QU8-2|XPO6;XPO6|p.P1120Lfs*4|1|0.28|ENSG00000169180|chr16:28098557-28098557|G/-|frameshift_variant	58.2462437865262	0.38179041844353556	3				NaN	NaN	0	NaN	5500	4250	9750
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9753	29.847	NaN	1186.3	30	0	179.83	0.106			+	-1	SVYCHLKQA	9	60	574.2827927971962	NaN	0	574.283203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))SVYC(Carbamidomethyl (C))HLKQA_	REV__ENST00000445008.6_1_11:130131193-130131319:-|nuORF	37.15910966729921	0.2899585034171616	3				NaN	NaN	0	NaN	5501	4250	9750
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9754	29.849	NaN	1255.7	30	0	261.72	0.038			+	-1	RSSCPATCAAL	11	47	597.2710326128554	1192.5275122925107	2	597.7709350585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_RSSC(Carbamidomethyl (C))PATC(Carbamidomethyl (C))AAL_	REV__ENST00000514430.5_1_4:103681882-103681918:-|nuORF	24.519189625965996	0.7326048944360514	3				NaN	NaN	0	NaN	5502	4250	9750
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9759	29.863	NaN	3861.9	30	0	532.89	0.214	+			5100	ATSPALFNR	9	59	488.76442597926314	975.5142990253263	2	488.7634582519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSPALFNR_	DYNC1H1|p.K3112Hfs*3|1|0.31|ENSG00000197102|chr14:102027998-102027999|-/TCACAAG|frameshift_variant;DYNC1H1|p.R3078W|1|0.11|ENSG00000197102|chr14:102027802-102027802|C/T|missense_variant;DYNC1H1|p.W4201Gfs*43|1|0.42|ENSG00000197102|chr14:102043958-102043958|G/-|frameshift_variant;ENSG00000197102|ENST00000360184|DYNC1H1	21.9598887501803	0.5980208138527809	3				NaN	NaN	0	NaN	5504	4253	9758
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9760	29.867	NaN	2339	30	0	317.13	0.106	+			15036	GTNPFATVK	9	60	467.75367553052024	933.4927981278405	2	467.7528076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTNPFATVK_	ENSG00000128298|ENST00000381669|BAIAP2L2;nc|ENSG00000128298|Q6UXY1-2|BAIAP2L2	31.529811441608018	0.5085848003137583	3				NaN	NaN	0	NaN	5505	4253	9758
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9761	29.869	NaN	2048.6	30	0	507.88	0.106	+			38489	SSATLNSIVAK	11	61	545.8086594507363	1089.6027659682725	2	545.81005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSATLNSIVAK_	ENSG00000007944|ENST00000356840|MYLIP;MYLIP|p.K199Rfs*26|1|0.07|ENSG00000007944|chr6:16143150-16143151|-/GAATT|frameshift_variant;MYLIP|p.R317Kfs*8|1|0.09|ENSG00000007944|chr6:16145014-16145015|-/A|frameshift_variant	58.62960593111931	0.3356877741313683	3				NaN	NaN	0	NaN	5506	4253	9758
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9762	29.871	NaN	2600.4	30	0	192.12	0.106	+			50792	YENTKLLSA	9	64	519.7771013716902	1037.5396498101802	2	519.7771606445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YENTKLLSA_	ENSG00000127324|ENST00000247829|TSPAN8;ENST00000552128.2_1_12:71519116-71532942:-|nuORF	76.16968421966216	0.11411088698345859	3				NaN	NaN	0	NaN	5507	4253	9758
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9763	29.872	NaN	1285.6	30	0	202.74	0.037	+			18742	ITIRRNICE	9	40	373.20989990234375	NaN	0	373.20989990234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ITIRRNICE_	ENST00000373304.3_1_X:77529238-77539002:-|nuORF;ENST00000373304.3_1_X:77538973-77539003:-|nuORF	24.519189625965996	0.35377483217337163	3				NaN	NaN	0	NaN	5508	4253	9758
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9768	29.887	NaN	1757.4	30	0	380.06	0.213	+			16798	HPDEKSIITY	10	60	601.8067560024466	1201.5989590716931	2	601.8058471679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HPDEKSIITY_	ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1;SPTBN1|p.K503Rfs*24|1|0.06|ENSG00000115306|chr2:54626095-54626095|G/-|frameshift_variant	36.446750945000026	0.5818864909973037	3				NaN	NaN	0	NaN	5510	4256	9767
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9769	29.89	NaN	1629.8	30	0	192.35	0.106				-1	 	0	52	491.7824281659824	981.5503033987649	2	491.7818298339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5511	4256	9767
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9770	29.892	NaN	1123.8	30	0	164.16	0.034	+			4685	ATLSICSPK	9	48	460.24974506433836	918.4849371954767	2	460.24920654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATLSICSPK_	ENSG00000121060|ENST00000316881|TRIM25;ENST00000572021.5_1_17:54969063-54989474:-|nuORF;TRIM25|p.G621D|1|0.15|ENSG00000121060|chr17:56891731-56891731|C/T|missense_variant	31.529811441608018	0.5085848003137583	3				NaN	NaN	0	NaN	5512	4256	9767
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9777	29.91	NaN	8337.9	30	0	1318.6	0.214	+			10495	EVSKIVQTY	9	69	533.7932472599115	1065.5719415866229	2	533.79296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EVSKIVQTY_	ENSG00000072110|ENST00000394419|ACTN1;nc|ENSG00000072110|P12814-2|ACTN1;nc|ENSG00000072110|P12814-4|ACTN1;nc|ENSG00000072110|P12814|ACTN1	163.1509380574825	0.003936019289634439	3				NaN	NaN	0	NaN	5516	4259	9776
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9778	29.914	NaN	5080.4	30	0	1035.6	0.106	+			48300	VTEGSFVYK	9	68	515.2664936119553	1028.5184342907105	2	515.2669677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTEGSFVYK_	ENSG00000057608|ENST00000380191|GDI2;GDI2|p.S222Afs*20|1|0.1|ENSG00000057608|chr10:5785197-5785197|T/-|frameshift_variant	98.62937762414208	0.04060045538121712	3				NaN	NaN	0	NaN	5517	4259	9776
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9779	29.916	NaN	1385.8	30	0	532.57	0.106				-1	 	0	33	343.1991280244916	684.3837031157832	2	343.19873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5518	4259	9776
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9780	29.917	NaN	2676	30	0	710.78	0.106			+	-1	HCGCARVVM	9	67	574.2452459488285	1146.4759389644569	2	574.2452392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term),2 Carbamidomethyl (C),Oxidation (M)	_(Acetyl (Protein N-term))HC(Carbamidomethyl (C))GC(Carbamidomethyl (C))ARVVM(Oxidation (M))_	REV__ENSG00000101144|ENST00000395863|BMP7;REV__ENSG00000153162|ENST00000283147|BMP6;REV__ENST00000476877.1_1_20:55746017-55748543:-|nuORF	37.028477286268924	0.45511415925449533	3				NaN	NaN	0	NaN	5519	4259	9776
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9781	29.919	NaN	1389.6	30	0	107.2	0.106	+			45971	VATASSLPPK	10	53	485.78242607863405	969.5502992240681	2	485.7821350097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VATASSLPPK_	ENSG00000064932|ENST00000361757|SBNO2	40.77816245573522	0.5419747034533848	3				NaN	NaN	0	NaN	5520	4259	9776
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9782	29.921	NaN	2375.7	30	0	387.38	0.106			+	-1	RSWMRSAL	8	58	511.76187344357163	1021.5091939539433	2	511.7616882324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_RSWM(Oxidation (M))RSAL_	REV__ENST00000370384.7_1_6:74019393-74019684:-|nuORF	51.33545320467046	0.5859736979383976	3				NaN	NaN	0	NaN	5521	4259	9776
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9783	29.923	NaN	2665.8	30	0	457.83	0.037				-1	EARGLLCGQD	10	51	373.51404012708514	1117.5202909814554	3	373.5135498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_EARGLLC(Carbamidomethyl (C))GQD_	ENST00000396894.8_1_X:48334751-48339908:+|nuORF	32.75053402867276	0.6123771875927935	3				NaN	NaN	0	NaN	5522	4259	9776
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9787	29.937	NaN	8936.4	30	0	963.77	0.214	+			30696	QDAKMAGIGI	10	79	502.2656660361761	NaN	0	502.265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QDAKMAGIGI_	CON__P19012	67.49366992349736	0.17308373824428946	3				NaN	NaN	0	NaN	5523	4262	9786
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9788	29.94	NaN	4298.8	30	0	1277.7	0.106	+			43773	TLIGWTKG	8	49	438.25323588778633	874.4919188423727	2	438.2528076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TLIGWTKG_	ENSG00000156510|ENST00000354624|HKDC1;nc|ENSG00000156510|Q2TB90-2|HKDC1;nc|ENSG00000156510|Q2TB90-3|HKDC1	31.954861631926434	0.7126016770032289	3				NaN	NaN	0	NaN	5524	4262	9786
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9789	29.942	NaN	7174.4	30	0	1482	0.106	+			42175	SYTSVKENF	9	73	537.7591819082389	1073.5038108832778	2	537.7593994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SYTSVKENF_	ENSG00000112584|ENST00000476287|FAM120B;FAM120B|p.Y298Ifs*24|1|0.3|ENSG00000112584|chr6:170318277-170318277|T/-|frameshift_variant;nc|ENSG00000112584|Q96EK7-2|FAM120B	75.04331003522576	0.118981335847003	3				NaN	NaN	0	NaN	5525	4262	9786
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9790	29.944	NaN	3963.4	30	0	413.51	0.106			+	8351	EALEVRQL	8	71	479.27171522037435	NaN	0	479.2716064453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EALEVRQL_	REV__ENSG00000138311|ENST00000395254|ZNF365;REV__ENST00000466727.1_1_10:64134143-64159545:+|nuORF;REV__nc|ENSG00000138311|Q70YC5-2|ZNF365;REV__nc|ENSG00000138311|Q70YC5-3|ZNF365;REV__nc|ENSG00000138311|Q70YC5-4|ZNF365;REV__ZNF365|p.K399Sfs*6|3|0.2|ENSG00000138311|chr10:62399754-62399754|A/-|frameshift_variant	66.42927471994793	1.7418937515398478	3				NaN	NaN	0	NaN	5526	4262	9786
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9791	29.946	NaN	2867.6	30	0	220.71	0.106	+			8564	EAWASKDATY	10	69	571.2620257336044	1140.5094985340088	2	571.262451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EAWASKDATY_	ENSG00000166508|ENST00000303887|MCM7;nc|ENSG00000166508|P33993-3|MCM7	120.30596017624542	0.026897611020491978	3				NaN	NaN	0	NaN	5527	4262	9786
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9792	29.947	NaN	1717.3	30	0	230.41	0.106			+	-1	SLGLMTLLM	9	56	505.7652770853897	NaN	0	505.7660827636719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Oxidation (M)	_SLGLM(Oxidation (M))TLLM(Oxidation (M))_	REV__tr|U7STS2|U7STS2_FUSNUDAACSfamilydicarboxylate/aminoacid:cation(Na+orH+)symporterOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01168PE=4SV=1	47.91560031466742	0.22105767942158736	3				NaN	NaN	0	NaN	5528	4262	9786
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9793	29.949	NaN	2137.1	30	0	170.38	0.035	+			10977	FEDFARFI	8	59	522.760656418081	1043.506759902962	2	522.7599487304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FEDFARFI_	ENSG00000136830|ENST00000373312|NIBAN2;nc|ENSG00000136830|Q96TA1-2|NIBAN2	44.116797842482775	0.6307669463330267	3				NaN	NaN	0	NaN	5529	4262	9786
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9802	29.969	NaN	3076.9	30	0	1157	0.214				-1	 	0	45	414.25344849722705	826.4923440612541	2	414.2527770996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5535	4265	9801
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9803	29.973	NaN	3257.8	30	0	582.52	0.106				-1	CYRCVFHY	8	64	574.2452459488285	1146.4759389644569	2	574.2456665039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_CYRC(Carbamidomethyl (C))VFHY_	ENSG00000108733|ENST00000225873|PEX12	39.021493756699265	0.6623843612266921	3				NaN	NaN	0	NaN	5536	4265	9801
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9804	29.975	NaN	1307.6	30	0	190.82	0.106				-1	TCRSGQKR	8	57	496.75825903732743	991.5019651414549	2	496.7570495605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_TC(Carbamidomethyl (C))RSGQKR_	ENSG00000182150|ENST00000653738|ERCC6L2;ERCC6L2|p.T191Nfs*22|1|0.04|ENSG00000182150|chr9:96004683-96004683|C/-|frameshift_variant;ERCC6L2|p.T303Hfs*50|1|0.13|ENSG00000182150|chr9:96012537-96012537|A/-|frameshift_variant;nc|ENSG00000182150|Q5T890-2|ERCC6L2	45.9519527083369	0.6193794311207887	3				NaN	NaN	0	NaN	5537	4265	9801
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9805	29.977	NaN	1290.7	30	0	130	0.106	+			25989	LSKGPGLEV	9	49	450.2640369612918	898.5135209893837	2	450.2633056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSKGPGLEV_	ENSG00000135723|ENST00000258201|FHOD1;ENST00000569085.1_1_16:67263541-67263664:-|nuORF	25.57405402267927	0.5642445186134241	3				NaN	NaN	0	NaN	5538	4265	9801
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9806	29.978	NaN	854.12	30	0	340.59	0.031				-1	 	0	36	370.7382720276182	NaN	0	370.738037109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5539	4265	9801
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9812	29.994	NaN	8693	30	0	1342.6	0.214	+			8189	EAAVAIKAM	9	63	452.2523743376756	902.4901957421512	2	452.25177001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EAAVAIKAM_	ENSG00000132507|ENST00000336458|EIF5A;ENSG00000253626|ENST00000520547|EIF5AL1;nc|ENSG00000132507|P63241-2|EIF5A	161.89823264540465	0.004149850016316161	3				NaN	NaN	0	NaN	5542	4268	9811
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9813	29.998	NaN	4982.6	30	0	479.01	0.106	+			40455	STVQILGAEK	10	69	523.2980129378747	1044.5814729425492	2	523.2987060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STVQILGAEK_	ENSG00000055044|ENST00000264279|NOP58;ENSG00000101361|ENST00000329276|NOP56;ENST00000480992.5_1_20:2635438-2636687:+|nuORF;ENST00000484998.5_1_20:2635830-2636687:+|nuORF	70.41160668669231	0.27395730963879994	3				NaN	NaN	0	NaN	5543	4268	9811
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9814	30	NaN	6062	30	0	1375	0.106	+			3937	ATATANQIILK	11	72	572.3405167343809	1142.6664805355617	2	572.3403930664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATATANQIILK_	nc|ENSG00000139793|Q5VZF2-2|MBNL2	142.36107225718385	0.00032120542358157484	3				NaN	NaN	0	NaN	5544	4268	9811
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9815	30.002	NaN	2784	30	0	366.36	0.106			+	11191	FHETIAKI	8	64	479.76981876182515	NaN	0	479.7696228027344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FHETIAKI_	REV__ENST00000490470.5_1_3:133407133-133426371:+|nuORF	60.97194046774394	1.7418937515398478	3				NaN	NaN	0	NaN	5545	4268	9811
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9816	30.004	NaN	1866.8	30	0	213.12	0.106			+	6918	CMGLLTEAAF	10	54	528.2483818350743	1054.4822107369484	2	528.2485961914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_CMGLLTEAAF_	REV__ENSG00000113263|ENST00000422843|ITK;REV__ENST00000519402.5_1_5:156668627-156679685:+|nuORF;REV__ENST00000519749.1_1_5:156668627-156672902:+|nuORF;REV__ITK|p.E468Vfs*37|1|0.42|ENSG00000113263|chr5:157244423-157244424|-/TG|frameshift_variant	45.9519527083369	0.4943008177357963	3				NaN	NaN	0	NaN	5546	4268	9811
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9817	30.005	NaN	2156.5	30	0	370.7	0.106			+	-1	RRGMGMVKM	9	64	541.2753226086566	1080.536092284113	2	541.2761840820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_RRGMGMVKM(Oxidation (M))_	REV__ENST00000598820.5_1_19:50061979-50083776:-|nuORF	44.116797842482775	0.37197099687881774	3				NaN	NaN	0	NaN	5547	4268	9811
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9818	30.007	NaN	1990	30	0	318.78	0.036	+			47196	VLYENPNLK	9	57	545.3022010549763	NaN	0	545.3001708984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VLYENPNLK_	DYNC1H1|p.W4201Gfs*43|1|0.42|ENSG00000197102|chr14:102043958-102043958|G/-|frameshift_variant;ENSG00000197102|ENST00000360184|DYNC1H1	62.107414245175825	0.1403307765918332	3				NaN	NaN	0	NaN	5548	4268	9811
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9829	30.031	NaN	5480.9	30	0	622.17	0.214			+	47427	VPSKDPSEPL	10	75	534.7829347989837	1067.5513166647672	2	534.7830200195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VPSKDPSEPL_	REV__CNKSR1|p.H694Tfs*16|1|0.42|ENSG00000142675|chr1:26189460-26189460|C/-|frameshift_variant;REV__CNKSR1|p.P512Hfs*58|2|0.35|ENSG00000142675|chr1:26188287-26188287|C/-|frameshift_variant;REV__CNKSR1|p.P513Tfs*9|2|0.38|ENSG00000142675|chr1:26188286-26188287|-/C|frameshift_variant;REV__ENSG00000142675|ENST00000361530|CNKSR1;REV__nc|ENSG00000142675|Q969H4|CNKSR1	45.97224482568171	0.49411383603842696	3				NaN	NaN	0	NaN	5556	4271	9828
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9830	30.034	NaN	2533.6	30	0	219.83	0.106			+	47589	VRPVSVTLQ	9	61	499.80462867616956	997.5947044191391	2	499.80340576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VRPVSVTLQ_	REV__ENSG00000154358|ENST00000680850|OBSCN;REV__nc|ENSG00000154358|Q5VST9-2|OBSCN;REV__nc|ENSG00000154358|Q5VST9-3|OBSCN;REV__nc|ENSG00000154358|Q5VST9-5|OBSCN;REV__nc|ENSG00000154358|Q5VST9-6|OBSCN;REV__nc|ENSG00000154358|Q5VST9|OBSCN;REV__OBSCN|p.E4688Dfs*35|1|0.03|ENSG00000154358|chr1:228318105-228318106|-/CATCTTC|frameshift_variant;REV__OBSCN|p.E4729Rfs*7|1|0.37|ENSG00000154358|chr1:228318930-228318931|-/C|frameshift_variant;REV__OBSCN|p.H7050Tfs*22|1|0.11|ENSG00000154358|chr1:228371922-228371922|C/-|frameshift_variant;REV__OBSCN|p.P6994Lfs*78|1|0.15|ENSG00000154358|chr1:228371756-228371756|C/-|frameshift_variant;REV__OBSCN|p.S5232Ffs*24|1|0.21|ENSG00000154358|chr1:228332900-228332901|-/T|frameshift_variant;REV__OBSCN|p.V3709Sfs*15|1|0.03|ENSG00000154358|chr1:228293609-228293610|-/A|frameshift_variant	62.107414245175825	0.1960472003779324	3				NaN	NaN	0	NaN	5557	4271	9828
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9831	30.036	NaN	1174.6	30	0	123.85	0.106			+	13512	GLPQAPGPWAR	11	57	575.3116021918161	1148.608651450432	2	575.311767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GLPQAPGPWAR_	REV__ENST00000519935.1_1_7:27209203-27211037:+|nuORF	32.81241826257853	0.645615689454792	3				NaN	NaN	0	NaN	5558	4271	9828
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9832	30.038	NaN	3003	30	0	466.72	0.106	+			13205	GICKVKNID	9	66	495.27639592240575	988.5382389116115	2	495.7765808105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GICKVKNID_	ENSG00000139687|ENST00000267163|RB1	42.396135135203025	0.392153681582562	3				NaN	NaN	0	NaN	5559	4271	9828
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9833	30.04	NaN	1547.3	30	0	180.56	0.106	+			23461	LAEFFPQN	8	56	483.2380280323505	964.461503131501	2	483.2363586425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LAEFFPQN_	ENSG00000100726|ENST00000262319|TELO2;TELO2|p.Q444Sfs*63|1|0.32|ENSG00000100726|chr16:1501463-1501463|C/-|frameshift_variant	42.47446043378293	0.6409579893742323	3				NaN	NaN	0	NaN	5560	4271	9828
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9834	30.042	NaN	2216	30	0	170.34	0.035	+			37605	SLPQSDFQL	9	68	517.7610431723809	1033.5075334115618	2	517.7587280273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLPQSDFQL_	ENSG00000140577|ENST00000268184|CRTC3;nc|ENSG00000140577|Q6UUV7-3|CRTC3	45.97224482568171	0.3502073465782774	3				NaN	NaN	0	NaN	5561	4271	9828
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9840	30.057	NaN	5262.2	30	0	822.24	0.214	+			14681	GTIGDMMQK	9	65	490.7309194576314	979.4472859820628	2	490.7305908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTIGDMMQK_	ENSG00000107874|ENST00000369937|CUEDC2;ENST00000477994.1_1_10:104183924-104192326:-|nuORF	136.26810882979174	0.012230845423532208	3				NaN	NaN	0	NaN	5564	4274	9839
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9841	30.061	NaN	5984.1	30	0	665.09	0.106				-1	 	0	68	447.24598909524	892.4774252572801	2	447.2454528808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5565	4274	9839
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9842	30.063	NaN	3961.7	30	0	1952.8	0.106				-1	SVCVLDLRK	9	41	363.87469882736866	1088.602267082306	3	363.87445068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SVC(Carbamidomethyl (C))VLDLRK_	ENSG00000101849|ENST00000645353|TBL1X;ENSG00000177565|ENST00000457928|TBL1XR1;nc|ENSG00000101849|O60907-2|TBL1X;TBL1X|p.G568S|1|0.45|ENSG00000101849|chrX:9714998-9714998|G/A|missense_variant	35.15202426646627	0.4747332964206883	3				NaN	NaN	0	NaN	5566	4274	9839
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9843	30.065	NaN	1772.2	30	0	388.15	0.106	+			30833	QEETNFKSL	9	66	548.2695464529749	1094.5245399727496	2	548.2698974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QEETNFKSL_	ENSG00000113810|ENST00000357388|SMC4;ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4;SMC4|p.K628Nfs*23|1|0.11|ENSG00000113810|chr3:160420762-160420762|A/-|frameshift_variant	40.77816245573522	0.41113185337114944	3				NaN	NaN	0	NaN	5567	4274	9839
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9844	30.067	NaN	1831.4	30	0	380.06	0.106			+	48417	VTINEKSY	8	49	477.2513836378891	952.4882143425782	2	477.25048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTINEKSY_	REV__tr|U7ST45|U7ST45_FUSNUOrganicsolventtolerance-likeN-terminaldomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01283PE=4SV=1	58.78195531508484	0.5138399468736706	3				NaN	NaN	0	NaN	5568	4274	9839
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9845	30.068	NaN	3303.2	30	0	421.74	0.106	+			1029	AEKLGGSAVI	10	56	472.77475077213694	943.5349486110739	2	473.2748718261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEKLGGSAVI_	ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65622809-65623088:-|nuORF	50.033510581677724	0.4566913063131936	3				NaN	NaN	0	NaN	5569	4274	9839
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9846	30.07	NaN	862.08	30	0	108.18	0.03	+			24404	LGAGGVVL	8	35	343.2160081930649	684.4174634529298	2	343.2157287597656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LGAGGVVL_	ENST00000484563.1_1_1:109968976-109969045:-|nuORF	24.504012794735996	0.7701314986472447	3				NaN	NaN	0	NaN	5570	4274	9839
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9852	30.085	NaN	6178.1	30	0	649.02	0.214	+			39685	STIGVDGSVYK	11	64	563.2934150492024	1124.5722771652047	2	563.2931518554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STIGVDGSVYK_	ENSG00000159399|ENST00000290573|HK2;ENST00000447818.2_1_X:79828255-79829731:-|nuORF	114.85826248499774	0.030064769379092568	3				NaN	NaN	0	NaN	5573	4277	9851
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9853	30.088	NaN	4167.1	30	0	352.42	0.106			+	27813	MSKGTGQLGL	10	62	496.26404380579294	990.5135346783859	2	496.2636413574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MSKGTGQLGL_	REV__ENSG00000105771|ENST00000270066|SMG9;REV__ENST00000595700.5_1_19:44242246-44254893:-|nuORF;REV__nc|ENSG00000105771|Q9H0W8-2|SMG9;REV__SMG9|p.H366Tfs*2|1|0.22|ENSG00000105771|chr19:43734395-43734395|G/-|frameshift_variant	47.95952297671804	0.47580206326914537	3				NaN	NaN	0	NaN	5574	4277	9851
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9854	30.09	NaN	3679.8	30	0	527.8	0.106	+			6002	AVMDGNVITAK	11	67	559.7981050616886	1117.581657190177	2	559.7980346679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVMDGNVITAK_	ENSG00000103316|ENST00000572914|CRYM;ENST00000571666.1_1_16:21273345-21289551:-|nuORF	72.7309140781514	0.21297294779664566	3				NaN	NaN	0	NaN	5575	4277	9851
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9855	30.092	NaN	1981.4	30	0	257.97	0.036	+			8602	ECIKCGKFF	9	61	537.7591819082389	1073.5038108832778	2	537.7578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ECIKCGKFF_	ENSG00000189164|ENST00000436120|ZNF527;nc|ENSG00000189164|Q8NB42-2|ZNF527	34.172542307311794	0.4838870758800184	3				NaN	NaN	0	NaN	5576	4277	9851
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9860	30.106	NaN	11946	30	0	1832.5	0.214	+			50560	YAVEGRDL	8	64	461.73537913361076	921.4562053340215	2	461.73492431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YAVEGRDL_	ENSG00000163479|ENST00000295702|SSR2;ENST00000368311.5_1_1:155984733-155990735:-|nuORF;ENST00000472898.5_1_1:155981561-155990687:-|nuORF;ENST00000484320.6_1_1:155988041-155990687:-|nuORF;ENST00000532074.5_1_1:155984857-155990687:-|nuORF	74.25504064058377	0.37144338840759816	3				NaN	NaN	0	NaN	5578	4280	9859
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9861	30.11	NaN	2919.5	30	0	336.15	0.106	+			2637	AQINSVFNK	9	58	510.777367273638	1019.540181614076	2	510.77777099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AQINSVFNK_	ENSG00000117597|ENST00000491415|UTP25	112.41091882917199	0.026537921851008135	3				NaN	NaN	0	NaN	5579	4280	9859
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9862	30.112	NaN	1742.9	30	0	259.58	0.106			+	50535	YAQHGVDF	8	60	468.7143395580029	935.4141261828058	2	468.7146301269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YAQHGVDF_	REV__tr|U7STZ4|U7STZ4_FUSNU1-deoxy-D-xylulose-5-phosphatesynthaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=dxsPE=3SV=1	26.79610172149135	0.7524337208463756	3				NaN	NaN	0	NaN	5580	4280	9859
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9863	30.113	NaN	1863.2	30	0	177.13	0.036	+			8783	EEINQQSQL	9	63	544.7656531718608	1087.5167534105215	2	544.7660522460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EEINQQSQL_	ENSG00000170759|ENST00000302418|KIF5B;KIF5B|p.M622Wfs*8|1|0.15|ENSG00000170759|chr10:32022898-32022898|T/-|frameshift_variant	63.53385203322761	0.18415635464017938	3				NaN	NaN	0	NaN	5581	4280	9859
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9867	30.128	NaN	8015.5	30	0	1144.9	0.214	+			14498	GTCLLIANK	9	65	495.27639592240575	988.5382389116115	2	495.2757873535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GTC(Carbamidomethyl (C))LLIANK_	CARM1|p.I452Sfs*12|1|0.18|ENSG00000142453|chr19:10920679-10920683|TTGTG/-|frameshift_variant;ENSG00000142453|ENST00000327064|CARM1;nc|ENSG00000142453|Q86X55-1|CARM1	122.1759843771914	0.019882474861609503	3				NaN	NaN	0	NaN	5582	4283	9866
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9868	30.131	NaN	1934.3	30	0	167.3	0.106	+			8047	DVARLIFSK	9	64	524.8112145074588	1047.6078760817174	2	524.8113403320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DVARLIFSK_	ENSG00000187522|ENST00000378372|HSPA14	42.86426827375447	0.38666266728046506	3				NaN	NaN	0	NaN	5583	4283	9866
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9869	30.133	NaN	2178.8	30	0	551.3	0.106	+			39219	STAGLIIGK	9	45	430.2663200599616	858.5180871867232	2	430.2657775878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STAGLIIGK_	ENSG00000104967|ENST00000263257|NOVA2;ENSG00000139910|ENST00000539517|NOVA1;nc|ENSG00000139910|P51513-5|NOVA1	54.776311868738084	0.25715957988447635	3				NaN	NaN	0	NaN	5584	4283	9866
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9870	30.135	NaN	1380.5	30	0	140.84	0.106			+	24311	LFHCFEDQI	9	55	576.2637263027929	1150.5128996723856	2	576.2633056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LFHCFEDQI_	REV__ENSG00000103852|ENST00000394132|TTC23;REV__nc|ENSG00000103852|Q5W5X9-2|TTC23;REV__nc|ENSG00000103852|Q5W5X9-3|TTC23	55.50420428727701	0.2510918378945873	3				NaN	NaN	0	NaN	5585	4283	9866
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9871	30.137	NaN	1851.7	30	0	193.47	0.036				-1	LTQSCLIVK	9	64	531.3056440651918	1060.5967351971835	2	531.3054809570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_LTQSC(Carbamidomethyl (C))LIVK_	ENST00000314759.5_1_13:21742466-21746510:-|nuORF	44.377184641726394	0.36891676396732553	3				NaN	NaN	0	NaN	5586	4283	9866
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9875	30.151	NaN	2457.9	30	0	510.88	0.215				-1	 	0	37	336.22775648083774	670.4409600284755	2	336.2273864746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5587	4286	9874
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9876	30.154	NaN	1816.2	30	0	195.99	0.106	+			50591	YDIRTNAV	8	57	476.24874067340534	NaN	0	476.248291015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YDIRTNAV_	ENSG00000117472|ENST00000372003|TSPAN1;ENST00000470318.1_1_1:46650565-46651202:+|nuORF	60.11826168202944	1.7418937515398478	3				NaN	NaN	0	NaN	5588	4286	9874
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9877	30.156	NaN	2565.1	30	0	197.7	0.106			+	33428	RIIITTGIY	9	66	525.3201893905403	NaN	0	525.320068359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RIIITTGIY_	REV__ENSG00000168509|ENST00000336751|HJV;REV__nc|ENSG00000168509|Q6ZVN8-2|HJV;REV__nc|ENSG00000168509|Q6ZVN8-3|HJV	26.79610172149135	0.34227917631780574	3				NaN	NaN	0	NaN	5589	4286	9874
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9878	30.158	NaN	1800.2	30	0	245.89	0.106			+	29463	PCPQPSAAPP	10	59	482.73157224434294	963.4485915554859	2	482.7305603027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PCPQPSAAPP_	REV__nc|ENSG00000099869|Q6U949|IGF2-AS	51.33545320467046	0.4446945571623749	3				NaN	NaN	0	NaN	5590	4286	9874
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9879	30.16	NaN	1636.2	30	0	237.31	0.106			+	599	ADNVKSPSVP	10	54	507.26736457855293	1012.5201762239059	2	507.2668762207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ADNVKSPSVP_	REV__RPA4|p.E186K|1|0.45|ENSG00000204086|chrX:96884866-96884866|G/A|missense_variant	53.08895987439943	0.42869529153390606	3				NaN	NaN	0	NaN	5591	4286	9874
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9880	30.162	NaN	2219.1	30	0	464.71	0.037			+	32841	RCPPSRSSLE	10	66	566.2801932848353	NaN	0	566.27978515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RCPPSRSSLE_	REV__ENST00000338560.11_1_17:16318878-16320981:+|nuORF	54.776311868738084	0.27540594196716844	3				NaN	NaN	0	NaN	5592	4286	9874
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9885	30.176	NaN	8104.4	30	0	1132.3	0.214	+			39959	STMGYMMAK	9	73	510.2216872663082	1018.4288215994164	2	510.2232360839844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STMGYMMAK_	ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;ENST00000518337.1_1_8:74128289-74128592:-|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P	101.60071028292904	0.0375685401170269	3				NaN	NaN	0	NaN	5594	4289	9884
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9886	30.179	NaN	3659.2	30	0	893.98	0.106	+			32385	QVCDVVLNH	9	67	542.2665443396163	1082.5185357460325	2	542.2683715820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_QVC(Carbamidomethyl (C))DVVLNH_	ENSG00000050327|ENST00000056217|ARHGEF5;nc|ENSG00000050327|Q12774-2|ARHGEF5	67.49366992349736	0.1516260258713357	3				NaN	NaN	0	NaN	5595	4289	9884
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9887	30.181	NaN	2886.9	30	0	252.77	0.106	+			28093	NAFKEITTM	9	64	535.7636568285545	1069.512760723909	2	535.7636108398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_NAFKEITTM(Oxidation (M))_	ENSG00000137947|ENST00000370500|GTF2B;ENST00000486078.1_1_1:89325774-89329699:-|nuORF;ENST00000494819.5_1_1:89324456-89357188:-|nuORF	65.46538089061403	0.16805504838372562	3				NaN	NaN	0	NaN	5596	4289	9884
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9888	30.183	NaN	1167	30	0	351.03	0.106	+			12708	GEKRRGGK	8	40	444.2635723097982	NaN	0	444.2633361816406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEKRRGGK_	ENSG00000133401|ENST00000438447|PDZD2;ENST00000502824.1_1_5:31799421-31843499:+|nuORF;nc|ENSG00000133401|O15018-2|PDZD2;PDZD2|p.D2774Rfs*7|1|0.29|ENSG00000133401|chr5:32101201-32101202|-/G|frameshift_variant;PDZD2|p.E2629Kfs*37|1|0.23|ENSG00000133401|chr5:32097314-32097314|A/-|frameshift_variant;PDZD2|p.G594Afs*45|1|0.09|ENSG00000133401|chr5:32052720-32052720|A/-|frameshift_variant;PDZD2|p.K1843Rfs*31|3|0.26|ENSG00000133401|chr5:32088970-32088970|A/-|frameshift_variant;PDZD2|p.Q1108Sfs*17|1|0.35|ENSG00000133401|chr5:32074423-32074423|C/-|frameshift_variant;PDZD2|p.S2770Gfs*12|1|0.04|ENSG00000133401|chr5:32101193-32101194|-/GGGT|frameshift_variant;PDZD2|p.V1845Rfs*6|2|0.38|ENSG00000133401|chr5:32088969-32088970|-/A|frameshift_variant	30.503639358989545	1.7418937515398478	3				NaN	NaN	0	NaN	5597	4289	9884
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9889	30.185	NaN	2813.9	30	0	360.6	0.106	+			29130	NTYVALYKF	9	63	559.7981050616886	1117.581657190177	2	559.7974243164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NTYVALYKF_	ENSG00000144681|ENST00000273183|STAC;ENST00000473452.1_1_3:36527678-36547327:+|nuORF	41.42661286455405	0.403525789677298	3				NaN	NaN	0	NaN	5598	4289	9884
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9890	30.187	NaN	2635	30	0	259.28	0.106			+	50608	YDTVTTVSL	9	64	499.7554190830066	997.4962852328132	2	499.756103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YDTVTTVSL_	REV__CCR8|p.F250Sfs*25|1|0.37|ENSG00000179934|chr3:39333077-39333077|T/-|frameshift_variant;REV__ENSG00000179934|ENST00000326306|CCR8	60.97194046774394	0.20551255781574032	3				NaN	NaN	0	NaN	5599	4289	9884
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9891	30.189	NaN	1304.2	30	0	71.776	0.036	+			897	AEHPIKISY	9	57	529.2864845148638	NaN	0	529.286865234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AEHPIKISY_	ENSG00000125780|ENST00000381458|TGM3	37.15910966729921	0.2899585034171616	3				NaN	NaN	0	NaN	5600	4289	9884
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9895	30.203	NaN	4069	30	0	402.47	0.214	+			45928	VAQSTRIIY	9	62	525.80117081347	1049.5877886937399	2	525.80126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VAQSTRIIY_	ENSG00000111669|ENST00000396705|TPI1;nc|ENSG00000111669|P60174-3|TPI1;nc|ENSG00000111669|P60174-4|TPI1	47.657333605630114	0.33044192980041115	3				NaN	NaN	0	NaN	5601	4292	9894
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9896	30.206	NaN	2385.4	30	0	195.87	0.106	+			43461	TGNPTVIKM	9	63	480.76298793542173	959.5114229376435	2	480.7622375488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TGNPTVIKM_	ENSG00000140575|ENST00000268182|IQGAP1;ENSG00000145703|ENST00000274364|IQGAP2;ENST00000512383.1_1_5:75964652-75969784:+|nuORF;IQGAP1|p.S1529Afs*10|1|0.15|ENSG00000140575|chr15:90492665-90492665|A/-|frameshift_variant;IQGAP2|p.Q1499Rfs*15|1|0.05|ENSG00000145703|chr5:76701201-76701202|-/CCGAG|frameshift_variant;nc|ENSG00000145703|Q13576-2|IQGAP2;nc|ENSG00000145703|Q13576-3|IQGAP2	70.8162118820467	0.13725933411854815	3				NaN	NaN	0	NaN	5602	4292	9894
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9897	30.208	NaN	5899.2	30	0	2107.3	0.106	+			19007	IVVPKAAIVAR	11	51	379.5889442523503	1135.7450033572509	3	379.5889587402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IVVPKAAIVAR_	ENSG00000265972|ENST00000582401|TXNIP;ENST00000488537.1_1_1:145440216-145440639:+|nuORF;nc|ENSG00000265972|Q9H3M7-2|TXNIP	48.601550744091256	0.44024757269956427	3				NaN	NaN	0	NaN	5603	4292	9894
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9898	30.21	NaN	2364.5	30	0	302.29	0.036	+			17304	IAEEQQRIL	9	64	550.3096778313947	1098.6048027295892	2	550.3097534179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IAEEQQRIL_	ENSG00000092964|ENST00000521913|DPYSL2;ENST00000521983.1_1_8:26484742-26500445:+|nuORF;nc|ENSG00000092964|Q16555-2|DPYSL2;nc|ENSG00000092964|Q16555|DPYSL2	56.43379154798735	0.2433427591689151	3				NaN	NaN	0	NaN	5604	4292	9894
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9906	30.229	NaN	22436	30	0	3035.7	0.214	+			20520	KFIDTTSKF	9	74	543.7950148146348	1085.5754766960695	2	543.795654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KFIDTTSKF_	ENSG00000100316|ENST00000216146|RPL3;ENSG00000140986|ENST00000268661|RPL3L;ENST00000417615.1_1_14:99439218-99439536:-|nuORF;ENST00000473638.5_1_22:39708982-39709710:-|nuORF	152.06079943815163	0.00638878961959199	3				NaN	NaN	0	NaN	5609	4295	9905
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9907	30.233	NaN	6814.5	30	0	1351.8	0.106	+			4686	ATLSICSPK	9	61	460.24974506433836	918.4849371954767	2	460.2492980957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATLSICSPK_	ENSG00000121060|ENST00000316881|TRIM25;ENST00000572021.5_1_17:54969063-54989474:-|nuORF;TRIM25|p.G621D|1|0.15|ENSG00000121060|chr17:56891731-56891731|C/T|missense_variant	115.49404669440601	0.023927554121326553	3				NaN	NaN	0	NaN	5610	4295	9905
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9908	30.235	NaN	3405.5	30	0	218.86	0.106				-1	 	0	57	491.7824281659824	981.5503033987649	2	491.7816467285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5611	4295	9905
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9909	30.237	NaN	4303.2	30	0	524.56	0.106	+			8580	EAYPDHTQF	9	65	554.2412579845818	1106.4679630359635	2	554.2413330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EAYPDHTQF_	ENSG00000151500|ENST00000341541|THYN1;ENST00000533975.1_1_11:134119036-134122923:-|nuORF;nc|ENSG00000151500|Q9P016-2|THYN1;THYN1|p.N194Ifs*15|2|0.22|ENSG00000151500|chr11:134248859-134248859|T/-|frameshift_variant	82.24051045832904	0.08786059719216216	3				NaN	NaN	0	NaN	5612	4295	9905
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9910	30.238	NaN	2383.5	30	0	723.11	0.106			+	-1	MVATIIVRST	10	32	369.545414315239	1105.614413545917	3	369.5448913574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_M(Oxidation (M))VATIIVRST_	REV__PKHD1|p.T1742M|1|0.4|ENSG00000170927|chr6:52024585-52024585|G/A|missense_variant	27.047317107675042	0.6589519614906109	3				NaN	NaN	0	NaN	5613	4295	9905
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9911	30.24	NaN	1978.3	30	0	323.02	0.038			+	45645	TYSFQFAPSPS	11	48	616.2856056986832	1230.5566584641663	2	616.2850952148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TYSFQFAPSPS_	REV__ENST00000533277.5_1_11:66612933-66613146:+|nuORF	40.05817265558897	0.5571470695993369	3				NaN	NaN	0	NaN	5614	4295	9905
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9912	30.241	NaN	1475.5	30	0	142.32	0.146			+	-1	LLCFMGKCLL	10	40	399.87750779947487	1196.6106939986246	3	399.876708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_LLC(Carbamidomethyl (C))FMGKCLL_	REV__nc|ENSG00000148219|O75129-4|ASTN2	23.52269567125451	0.6877354443478558	3				NaN	NaN	0	NaN	5615	4295	9905
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9917	30.257	NaN	11729	30	0	2972.3	0.214	+			44736	TTLTSQYIK	9	73	527.7928534383396	1053.5711539434792	2	527.7929077148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTLTSQYIK_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	138.06239232086	0.011389075116295402	3				NaN	NaN	0	NaN	5617	4298	9916
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9918	30.261	NaN	21112	30	0	11654	0.106				-1	 	0	62	350.8591235065385	1049.5555411198154	3	350.8587646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5618	4298	9916
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9919	30.263	NaN	7888.5	30	0	1290	0.106	+			7248	DALRCVNNY	9	79	562.7615126888334	1123.5084724444666	2	562.7614135742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_DALRC(Carbamidomethyl (C))VNNY_	ENSG00000143155|ENST00000367833|TIPRL;nc|ENSG00000143155|O75663-2|TIPRL;TIPRL|p.F156Lfs*13|1|0.33|ENSG00000143155|chr1:168191448-168191448|T/-|frameshift_variant	90.60085204095205	0.06317133949006545	3				NaN	NaN	0	NaN	5619	4298	9916
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9920	30.264	NaN	3999.2	30	0	607.4	0.106			+	33393	RIATVWCT	8	64	475.25176603025216	948.4889791273043	2	475.2509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RIATVWCT_	REV__ENSG00000115290|ENST00000263915|GRB14;REV__GRB14|p.E402Rfs*18|1|0.29|ENSG00000115290|chr2:164497391-164497392|-/T|frameshift_variant;REV__nc|ENSG00000115290|Q14449-2|GRB14	51.33545320467046	0.5859736979383976	3				NaN	NaN	0	NaN	5620	4298	9916
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9921	30.266	NaN	4241.4	30	0	241.42	0.106	+			12818	GENADSQIKL	10	63	537.7757493651474	1073.5369457970946	2	537.7757568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GENADSQIKL_	ENSG00000189060|ENST00000340857|H1-0;nc|ENSG00000189060|P07305-2|H1-0	117.7056744995986	0.030570130731382417	3				NaN	NaN	0	NaN	5621	4298	9916
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9922	30.268	NaN	5196.3	30	0	1517.9	0.106	+			30935	QELQELNRV	9	70	564.8045535557765	1127.5945541783528	2	564.8042602539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QELQELNRV_	ENST00000486498.1_1_2:171811278-171813015:+|nuORF	80.45461616416974	0.09558281504443908	3				NaN	NaN	0	NaN	5622	4298	9916
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9923	30.27	NaN	5234.4	30	0	1775.3	0.033	+			18831	IVAGSLITK	9	62	451.28988121212114	900.5652094910423	2	451.28924560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IVAGSLITK_	ENSG00000196504|ENST00000545856|PRPF40A;nc|ENSG00000196504|O75400-2|PRPF40A;nc|ENSG00000196504|O75400|PRPF40A;PRPF40A|p.K411Sfs*40|2|0.19|ENSG00000196504|chr2:152672597-152672597|T/-|frameshift_variant;PRPF40A|p.Q412Afs*4|1|0.16|ENSG00000196504|chr2:152672596-152672597|-/T|frameshift_variant	90.36981228632155	0.0638227155548745	3				NaN	NaN	0	NaN	5623	4298	9916
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9933	30.292	NaN	4673	30	0	2787.5	0.214	+			46779	VGYFVDKQL	9	39	356.8626683604192	1067.5661756814577	3	356.86224365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VGYFVDKQL_	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42|TTN;TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;TTN|p.D20259Rfs*40|1|0.44|ENSG00000155657|chr2:178583105-178583106|-/T|frameshift_variant;TTN|p.D21555Ifs*6|1|0.33|ENSG00000155657|chr2:178576659-178576659|G/-|frameshift_variant;TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;TTN|p.E20392Dfs*6|1|0.04|ENSG00000155657|chr2:178582357-178582358|-/TTTAAAATTA|frameshift_variant;TTN|p.E20392Kfs*4|1|0.02|ENSG00000155657|chr2:178582359-178582360|-/TTTT|frameshift_variant;TTN|p.F18705Lfs*8|1|0.37|ENSG00000155657|chr2:178590687-178590687|A/-|frameshift_variant;TTN|p.G19920Afs*12|1|0.42|ENSG00000155657|chr2:178584961-178584961|G/-|frameshift_variant;TTN|p.G22029Efs*22|2|0.13|ENSG00000155657|chr2:178575125-178575125|T/-|frameshift_variant;TTN|p.I24998Nfs*2|1|0.35|ENSG00000155657|chr2:178566216-178566217|-/T|frameshift_variant;TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;TTN|p.K26626Nfs*34|1|0.34|ENSG00000155657|chr2:178561331-178561331|T/-|frameshift_variant;TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant;TTN|p.P16126Rfs*3|1|0.25|ENSG00000155657|chr2:178607301-178607302|TG/-|frameshift_variant;TTN|p.P22810Hfs*10|1|0.03|ENSG00000155657|chr2:178572780-178572781|-/AAAT|frameshift_variant;TTN|p.V22573Cfs*4|2|0.31|ENSG00000155657|chr2:178573492-178573492|C/-|frameshift_variant;TTN|p.V27442Cfs*4|1|0.05|ENSG00000155657|chr2:178558107-178558108|-/A|frameshift_variant	18.324413293986947	0.6112419832031293	3				NaN	NaN	0	NaN	5630	4301	9932
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9934	30.295	NaN	2566.4	30	0	273.35	0.106			+	46957	VKGHLFHHQ	9	66	551.7987729282506	1101.5829929233012	2	551.798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VKGHLFHHQ_	REV__ENST00000392952.7_1_10:116194658-116195159:-|nuORF	27.882242232435846	0.5426732730940306	3				NaN	NaN	0	NaN	5631	4301	9932
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9935	30.297	NaN	4167.6	30	0	939.97	0.106				-1	VLGCATRGR	9	58	495.26785786526096	988.521162797322	2	495.26708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_VLGC(Carbamidomethyl (C))ATRGR_	TKTL2|p.A377V|1|0.2|ENSG00000151005|chr4:163472605-163472605|G/A|missense_variant	50.0245360154114	0.3026755932229825	3				NaN	NaN	0	NaN	5632	4301	9932
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9936	30.299	NaN	1791.8	30	0	236.91	0.106				-1	 	0	51	407.7376716149759	813.4607902967518	2	407.7369384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5633	4301	9932
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9937	30.301	NaN	2498.6	30	0	523.96	0.106			+	-1	GSDSCIRSY	9	67	522.7230152868116	1043.431477640423	2	522.722900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_GSDSC(Carbamidomethyl (C))IRSY_	REV__ENSG00000197619|ENST00000598071|ZNF615;REV__nc|ENSG00000197619|Q8N8J6-3|ZNF615;REV__ZNF615|p.T281Lfs*103|1|0.3|ENSG00000197619|chr19:51994235-51994235|T/-|frameshift_variant	37.81151784470057	0.4459294069877048	3				NaN	NaN	0	NaN	5634	4301	9932
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9938	30.303	NaN	4274.7	30	0	488.42	0.106			+	11103	FFIGCVFCIA	10	69	560.2701226448632	1118.5256923565264	2	560.2701416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FFIGCVFCIA_	REV__SFT2D1|p.V45I|2|0.2|ENSG00000198818|chr6:166330178-166330178|C/T|missense_variant	77.94384346573518	0.21241958424364343	3				NaN	NaN	0	NaN	5635	4301	9932
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9939	30.304	NaN	3663.4	30	0	308.68	0.036	+			17239	HVSTLLPALL	10	71	532.3293894607094	1062.6442259882187	2	532.329345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HVSTLLPALL_	ENSG00000204839|ENST00000398882|MROH6	31.954861631926434	0.6188749698950511	3				NaN	NaN	0	NaN	5636	4301	9932
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9947	30.323	NaN	4772.9	30	0	1472.2	0.214			+	24950	LLAGGASP	8	55	343.19775355579407	NaN	0	343.197998046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LLAGGASP_	REV__chr17:78119046-78119257|110|14.03|0.84|4.06|-|0|TMC6,None|1	28.2542754592877	1.7418937515398478	3				NaN	NaN	0	NaN	5641	4304	9946
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9948	30.326	NaN	6999.3	30	0	2669.1	0.106	+			50704	YEERVQAVV	9	67	546.7884830579395	1091.562413182679	2	546.7890014648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YEERVQAVV_	ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1;SPTBN1|p.K503Rfs*24|1|0.06|ENSG00000115306|chr2:54626095-54626095|G/-|frameshift_variant	60.11826168202944	0.21262886028301267	3				NaN	NaN	0	NaN	5642	4304	9946
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9949	30.328	NaN	5281.2	30	0	954.67	0.106	+			51220	YPTQPGQGY	9	69	505.73280205817974	1009.4510511831595	2	505.7330627441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YPTQPGQGY_	ENSG00000089280|ENST00000254108|FUS;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;FUS|p.P152Lfs*33|1|0.31|ENSG00000089280|chr16:31184324-31184324|C/-|frameshift_variant;nc|ENSG00000089280|P35637-2|FUS	49.536043120802724	0.308405419312776	3				NaN	NaN	0	NaN	5643	4304	9946
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9950	30.33	NaN	3840.5	30	0	456.59	0.106	+			28187	NAQRQDIAF	9	66	531.7705603960318	1061.5265678588635	2	531.7710571289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NAQRQDIAF_	ANXA2|p.A74T|1|0.39|ENSG00000182718|chr15:60364452-60364452|C/T|missense_variant;ANXA2|p.S64I|1|0.3|ENSG00000182718|chr15:60364481-60364481|C/A|missense_variant;ENSG00000182718|ENST00000451270|ANXA2;ENST00000557937.5_1_15:60655071-60678274:-|nuORF;nc|ENSG00000182718|P07355-2|ANXA2;NPTN-ANXA2|1|fusion	65.46538089061403	0.16805504838372562	3				NaN	NaN	0	NaN	5644	4304	9946
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9951	30.332	NaN	3511.5	30	0	605.96	0.106	+			43201	TEVIHTGTL	9	63	485.7643609186115	969.514168904023	2	485.763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TEVIHTGTL_	ENSG00000182986|ENST00000682928|ZNF320;ENSG00000189190|ENST00000692063|ZNF600;ENSG00000203326|ENST00000474037|ZNF525;ENSG00000204604|ENST00000595646|ZNF468;ENSG00000213020|ENST00000652185|ZNF611;ENSG00000213793|ENST00000638862|ZNF888;ENSG00000213799|ENST00000458035|ZNF845;nc|ENSG00000189190|Q6ZNG1|ZNF600;nc|ENSG00000204604|Q5VIY5-2|ZNF468;nc|ENSG00000213020|Q8N823-2|ZNF611;nc|ENSG00000293246|Q8N8H1|ZNF321P;ZNF468|p.K232Nfs*4|1|0.3|ENSG00000204604|chr19:52841598-52841598|T/-|frameshift_variant;ZNF525|p.S149Yfs*51|1|0.05|ENSG00000203326|chr19:53381024-53381025|-/ATTGC|frameshift_variant;ZNF611|p.F463Lfs*36|1|0.09|ENSG00000213020|chr19:52705666-52705666|A/-|frameshift_variant;ZNF611|p.K221Nfs*6|1|0.35|ENSG00000213020|chr19:52706392-52706392|T/-|frameshift_variant	96.19043198914106	0.047412499214244314	3				NaN	NaN	0	NaN	5645	4304	9946
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9952	30.334	NaN	1604.2	30	0	326.49	0.038	+			41978	SVYDHQGIFK	10	51	597.3020018431758	1192.5894507531516	2	597.3015747070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVYDHQGIFK_	ENSG00000153989|ENST00000368494|NUS1;NUS1|p.R143I|2|0.23|ENSG00000153989|chr6:117693054-117693054|G/T|missense_variant	51.19269402634007	0.44601001148513897	3				NaN	NaN	0	NaN	5646	4304	9946
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9953	30.334	NaN	1818.5	30	0	466.49	0.14				-1	 	0	46	414.25344849722705	826.4923440612541	2	414.2526550292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5647	4304	9946
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9965	30.362	NaN	10457	30	0	1357	0.214	+			5663	AVDQIAFQK	9	79	510.27999050360756	1018.5454280740151	2	510.2794189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVDQIAFQK_	ENSG00000144554|ENST00000675286|FANCD2;FANCD2|p.I1249Nfs*2|1|0.48|ENSG00000144554|chr3:10090346-10090347|-/A|frameshift_variant;FANCD2|p.N890Ifs*14|1|0.36|ENSG00000144554|chr3:10073312-10073312|A/-|frameshift_variant;nc|ENSG00000144554|Q9BXW9-1|FANCD2;nc|ENSG00000144554|Q9BXW9-3|FANCD2;nc|ENSG00000144554|Q9BXW9-4|FANCD2	102.0615471778698	0.03709830720253279	3				NaN	NaN	0	NaN	5656	4307	9964
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9966	30.365	NaN	2998.3	30	0	770.11	0.106			+	27021	LYSGSSHW	8	55	468.7143395580029	935.4141261828058	2	469.2432556152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LYSGSSHW_	REV__ENSG00000198198|ENST00000634258|SZT2;REV__nc|ENSG00000198198|Q5T011-5|SZT2;REV__SZT2|p.R3241Afs*11|1|0.33|ENSG00000198198|chr1:43448401-43448401|G/-|frameshift_variant	19.359975847455235	0.7988239741663654	3				NaN	NaN	0	NaN	5657	4307	9964
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9967	30.367	NaN	2471.4	30	0	161.75	0.106	+			53	AAAQHFTAL	9	61	465.24548115126674	928.4764093693335	2	465.2455139160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AAAQHFTAL_	ENSG00000146950|ENST00000380913|SHROOM2;SHROOM2|p.Q1179Rfs*3|1|0.46|ENSG00000146950|chrX:9932813-9932813|C/-|frameshift_variant	58.22992032128504	0.22837015374068087	3				NaN	NaN	0	NaN	5658	4307	9964
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9968	30.369	NaN	2368.4	30	0	632.33	0.106	+			32709	RAKPEGAL	8	46	421.24858511991823	840.4826173066365	2	421.2484130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RAKPEGAL_	ENSG00000119888|ENST00000263735|EPCAM	44.116797842482775	0.6307669463330267	3				NaN	NaN	0	NaN	5659	4307	9964
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9969	30.371	NaN	2599.7	30	0	389.74	0.106			+	-1	GSVLACLSL	9	57	460.24974506433836	918.4849371954767	2	461.25677490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_GSVLAC(Carbamidomethyl (C))LSL_	REV__ENST00000467485.5_1_6:26384034-26390495:+|nuORF;REV__nc|ENSG00000124508|Q8WVV5-4|BTN2A2	30.503639358989545	0.5181749237905803	3				NaN	NaN	0	NaN	5660	4307	9964
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9970	30.372	NaN	2311.9	30	0	349.01	0.106	+			36219	SELTQPKL	8	50	458.2610220019137	914.5074910706275	2	458.2607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SELTQPKL_	ENSG00000197601|ENST00000354817|FAR1;ENST00000524933.1_1_11:13716477-13732426:+|nuORF	54.776311868738084	0.5534952410049249	3				NaN	NaN	0	NaN	5661	4307	9964
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9971	30.374	NaN	3067.2	30	0	165.28	0.036	+			42928	TEIIRQQGL	9	71	529.3040102604799	1056.5934675877597	2	529.303955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TEIIRQQGL_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	64.20726635412375	0.17854274437659667	3				NaN	NaN	0	NaN	5662	4307	9964
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9981	30.397	NaN	8066.6	30	0	1350.8	0.214	+			23433	LADDSVRSL	9	76	488.25945287397144	974.5043528147429	2	488.258544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LADDSVRSL_	ENSG00000138078|ENST00000409411|PREPL;nc|ENSG00000138078|Q4J6C6-2|PREPL;nc|ENSG00000138078|Q4J6C6|PREPL	123.20810148215591	0.019257656778428764	3				NaN	NaN	0	NaN	5669	4310	9980
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9982	30.401	NaN	4310	30	0	536.81	0.106	+			13006	GEVDVEQHTL	10	71	563.7729696796591	1125.5313864261182	2	563.7734985351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEVDVEQHTL_	ENSG00000134057|ENST00000256442|CCNB1;ENSG00000157456|ENST00000288207|CCNB2;nc|ENSG00000134057|P14635-2|CCNB1	102.0615471778698	0.07157459376830236	3				NaN	NaN	0	NaN	5670	4310	9980
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9983	30.403	NaN	2561.9	30	0	280.93	0.106			+	9081	EGHSPLGL	8	46	405.2116375519943	808.4087221707886	2	405.2112731933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EGHSPLGL_	REV__nc|ENSG00000187634|Q96NU1-2|SAMD11;REV__nc|ENSG00000187634|Q96NU1|SAMD11	40.5726180659479	0.6527593143185008	3				NaN	NaN	0	NaN	5671	4310	9980
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9984	30.405	NaN	3873.7	30	0	300.76	0.106				-1	 	0	66	477.29303307354223	952.5715132138845	2	477.29241943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5672	4310	9980
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9985	30.406	NaN	1290.9	30	0	50.89	0.106			+	8805	EEKQKFEQL	9	60	589.8059732914754	1177.5973936497508	2	589.8059692382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EEKQKFEQL_	REV__ENSG00000124126|ENST00000371941|PREX1;REV__nc|ENSG00000124126|Q8TCU6-2|PREX1;REV__nc|ENSG00000124126|Q8TCU6-3|PREX1	33.921630207806714	0.48623198279849766	3				NaN	NaN	0	NaN	5673	4310	9980
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9986	30.408	NaN	3463.3	30	0	703.21	0.106	+			42028	SVYVYKVLK	9	62	549.8318515764013	1097.6491502196025	2	550.3324584960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVYVYKVLK_	ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;nc|ENSG00000203814|Q5QNW6-2|H2BC18	70.39856735676683	0.13906523160059378	3				NaN	NaN	0	NaN	5674	4310	9980
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9987	30.41	NaN	7464.9	30	0	4389.8	0.037				-1	 	0	53	366.89043202663584	1097.6494666801075	3	366.889892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5675	4310	9980
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9993	30.426	NaN	6501.6	30	0	976.78	0.214	+			5426	ATYILEAGK	9	61	483.2690778777575	964.5236028223151	2	483.2682189941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATYILEAGK_	ENSG00000148444|ENST00000376836|COMMD3;ENST00000463409.6_1_10:22605382-22615407:+|nuORF;ENST00000470045.1_1_10:22605346-22607030:+|nuORF;ENST00000472673.5_1_10:22606461-22607284:+|nuORF;ENST00000479958.6_1_10:22605346-22607121:+|nuORF;ENST00000483684.1_1_10:22606823-22607748:+|nuORF;ENST00000496071.5_1_10:22605382-22607284:+|nuORF;ENST00000602574.5_1_10:22605346-22607236:+|nuORF	102.0615471778698	0.03709830720253279	3				NaN	NaN	0	NaN	5678	4313	9992
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9994	30.43	NaN	5922.2	30	0	2777.9	0.106	+			24591	LGPTLLDLR	9	59	499.306103214549	996.597653495898	2	499.30535888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LGPTLLDLR_	ENSG00000174514|ENST00000367147|MFSD4A;nc|ENSG00000174514|Q8N468-2|MFSD4A	45.97224482568171	0.3502073465782774	3				NaN	NaN	0	NaN	5679	4313	9992
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9995	30.432	NaN	4466.9	30	0	575.47	0.106			+	17815	IEVTRESL	8	73	473.7642691259417	945.5139853186835	2	473.7635803222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IEVTRESL_	REV__ENSG00000139304|ENST00000644991|PTPRQ;REV__nc|ENSG00000139304|Q9UMZ3|PTPRQ;REV__PTPRQ|p.N2031Kfs*10|1|0.46|ENSG00000139304|chr12:80652805-80652806|-/A|frameshift_variant	62.107414245175825	0.4809183816468817	3				NaN	NaN	0	NaN	5680	4313	9992
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9996	30.433	NaN	3939	30	0	1496.4	0.106	+			37560	SLMHSFILK	9	56	364.53578106199575	1090.5855137861872	3	364.535400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_SLM(Oxidation (M))HSFILK_	ENSG00000125971|ENST00000357156|DYNLRB1;ENST00000480759.1_1_20:33117938-33128425:+|nuORF	67.49366992349736	0.1516260258713357	3				NaN	NaN	0	NaN	5681	4313	9992
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9997	30.435	NaN	1597.4	30	0	279.7	0.106				-1	ASMKKVKSL	9	37	336.5342280355883	NaN	0	336.5343322753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_ASM(Oxidation (M))KKVKSL_	ENST00000369426.9_1_1:119575536-119588262:-|nuORF	27.882242232435846	0.3367954786602879	3				NaN	NaN	0	NaN	5682	4313	9992
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9998	30.437	NaN	3485.2	30	0	392.12	0.106	+			36191	SELITKAVAA	10	66	501.79491619264047	1001.575279452081	2	501.7945556640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SELITKAVAA_	ENSG00000124575|ENST00000244534|H1-3;ENSG00000168298|ENST00000304218|H1-4;ENSG00000184357|ENST00000331442|H1-5;ENSG00000187837|ENST00000343677|H1-2	59.93077597824379	0.36646980200755325	3				NaN	NaN	0	NaN	5683	4313	9992
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9999	30.439	NaN	3428.9	30	0	695.14	0.036	+			30392	PVQPSPGGGER	11	66	540.7755291540211	1079.5365053748421	2	541.27685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PVQPSPGGGER_	ENST00000502773.5_1_4:157892054-157892213:-|nuORF	65.15724298150197	0.2774196309614691	3				NaN	NaN	0	NaN	5684	4313	9992
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10006	30.457	NaN	5523.5	30	0	557.25	0.214			+	37777	SLVVSGAPTI	10	66	472.27617309311603	NaN	0	472.27618408203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLVVSGAPTI_	REV__ENSG00000112964|ENST00000230882|GHR;REV__nc|ENSG00000112964|P10912-4|GHR	47.657333605630114	0.3204131577145918	3				NaN	NaN	0	NaN	5688	4316	10005
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10007	30.46	NaN	5739.3	30	0	3538.2	0.106	+			12850	GEPEKLGQAL	10	59	521.2825707722644	1040.5505886113287	2	521.2825927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEPEKLGQAL_	ENSG00000115677|ENST00000310931|HDLBP;ENST00000470710.1_1_2:242194755-242195742:-|nuORF;HDLBP|p.S551Kfs*2|1|0.11|ENSG00000115677|chr2:241248082-241248083|-/T|frameshift_variant	36.31764250033197	0.5830761606467809	3				NaN	NaN	0	NaN	5689	4316	10005
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10008	30.462	NaN	2381.2	30	0	370.15	0.106	+			18479	ISFYQLIF	8	56	515.7818516924021	NaN	0	515.7830810546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ISFYQLIF_	ENSG00000163913|ENST00000348417|IFT122;ENST00000506507.5_1_3:129168750-129233481:+|nuORF;nc|ENSG00000163913|Q9HBG6-10|IFT122;nc|ENSG00000163913|Q9HBG6-11|IFT122;nc|ENSG00000163913|Q9HBG6-3|IFT122;nc|ENSG00000163913|Q9HBG6-4|IFT122;nc|ENSG00000163913|Q9HBG6-5|IFT122;nc|ENSG00000163913|Q9HBG6-6|IFT122;nc|ENSG00000163913|Q9HBG6-7|IFT122;nc|ENSG00000163913|Q9HBG6-8|IFT122;nc|ENSG00000163913|Q9HBG6-9|IFT122	50.0245360154114	1.7418937515398478	3				NaN	NaN	0	NaN	5690	4316	10005
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10009	30.464	NaN	2441.8	30	0	808.16	0.106	+			31503	QLEQQVEKL	9	69	557.8093361905067	1113.6041194478132	2	557.8092651367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QLEQQVEKL_	ENSG00000131931|ENST00000254250|THAP1;ENST00000345117.2_1_8:42693107-42698298:-|nuORF	80.45461616416974	0.09558281504443908	3				NaN	NaN	0	NaN	5691	4316	10005
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10010	30.466	NaN	845.76	30	0	86.673	0.106				-1	RTLAILAA	8	41	435.77382041217874	NaN	0	435.7737731933594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))RTLAILAA_	ENSG00000206047|ENST00000382692|DEFA1;ENSG00000239839|ENST00000327857|DEFA3;ENSG00000240247|ENST00000382689|DEFA1B	25.450171626174864	1.7418937515398478	3				NaN	NaN	0	NaN	5692	4316	10005
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10011	30.468	NaN	2392	30	0	246.62	0.106				-1	SLMHSFILK	9	63	546.2998552370257	NaN	0	546.2984008789062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_SLM(Oxidation (M))HSFILK_	ENSG00000125971|ENST00000357156|DYNLRB1;ENST00000480759.1_1_20:33117938-33128425:+|nuORF	37.81151784470057	0.28666463014928195	3				NaN	NaN	0	NaN	5693	4316	10005
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10012	30.469	NaN	1922.6	30	0	233.64	0.034	+			19050	IYGSSHSW	8	59	468.7143395580029	935.4141261828058	2	469.2156677246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IYGSSHSW_	DUOX1|p.S186N|1|0.29|ENSG00000137857|chr15:45135535-45135535|G/A|missense_variant;ENSG00000137857|ENST00000389037|DUOX1;ENSG00000140279|ENST00000389039|DUOX2;nc|ENSG00000140279|Q9NRD8|DUOX2	54.76467175910256	0.5536104764165384	3				NaN	NaN	0	NaN	5694	4316	10005
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10019	30.486	NaN	8385.1	30	0	496.44	0.214				-1	 	0	78	531.8014908764966	1061.588428819793	2	531.8014526367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5698	4319	10018
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10020	30.489	NaN	8920	30	0	1059.2	0.106			+	29457	PCNMPKLAL	9	81	501.75918256350093	1001.5038121938019	2	501.75860595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_PCNM(Oxidation (M))PKLAL_	REV__ENSG00000143374|ENST00000369064|TARS2;REV__nc|ENSG00000143374|Q9BW92-2|TARS2	65.80317337860623	0.1652391959156183	3				NaN	NaN	0	NaN	5699	4319	10018
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10021	30.491	NaN	2332	30	0	234.1	0.106	+			50918	YGMPSTHTM	9	63	512.7149694285932	1023.4153859239865	2	512.7146606445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YGMPSTHTM_	SGPP2|p.A167T|1|0.21|ENSG00000163082|chr2:222521887-222521887|G/A|missense_variant	44.116797842482775	0.37197099687881774	3				NaN	NaN	0	NaN	5700	4319	10018
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10022	30.493	NaN	1531.6	30	0	239.86	0.106	+			12481	GEDSKQALQQL	11	65	608.8121945215005	NaN	0	608.8118286132812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEDSKQALQQL_	ENSG00000143375|ENST00000271636|CGN	75.65223720490533	0.10344861365078342	3				NaN	NaN	0	NaN	5701	4319	10018
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10023	30.495	NaN	2242	30	0	248.15	0.106				-1	ITHLPPEVM	9	60	526.7777975794359	1051.5410422256716	2	526.7757568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_ITHLPPEVM(Oxidation (M))_	ENSG00000118564|ENST00000341285|FBXL5;FBXL5|p.S518Rfs*7|1|0.07|ENSG00000118564|chr4:15625550-15625551|-/ATCTTCT|frameshift_variant;nc|ENSG00000118564|Q9UKA1-2|FBXL5	29.14955571784316	0.5308295550522326	3				NaN	NaN	0	NaN	5702	4319	10018
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10024	30.497	NaN	2028.5	30	0	226.05	0.034	+			7528	DGSFEPLR	8	58	460.7274198232933	919.4402867133866	2	460.7279357910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DGSFEPLR_	ENST00000378164.6_1_8:120845017-120845065:-|nuORF	55.50420428727701	0.5462892107279674	3				NaN	NaN	0	NaN	5703	4319	10018
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10033	30.517	NaN	6502.7	30	0	629.58	0.215	+			5558	AVANIVNSVK	10	69	507.80099002599695	1013.5874271187939	2	507.80072021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVANIVNSVK_	ENSG00000042286|ENST00000307864|AIFM2;nc|ENSG00000042286|Q9BRQ8-2|AIFM2	89.02883481214508	0.13663399911061233	3				NaN	NaN	0	NaN	5709	4322	10032
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10034	30.52	NaN	3274.4	30	0	597.6	0.106	+			18930	IVNDFAYMK	9	68	558.7738812315523	1115.5332095299045	2	558.7742919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_IVNDFAYM(Oxidation (M))K_	ENSG00000170348|ENST00000303575|TMED10;ENST00000534816.1_1_8:146220430-146220868:+|nuORF;ENST00000555036.1_1_14:75602424-75614456:-|nuORF;ENST00000555873.1_1_14:75601590-75605782:-|nuORF;ENST00000556969.5_1_14:75601590-75614465:-|nuORF	70.8162118820467	0.13725933411854815	3				NaN	NaN	0	NaN	5710	4322	10032
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10035	30.522	NaN	3041	30	0	318.6	0.106			+	6867	CLAVHQSYI	9	66	517.2621217534619	1032.5096905737237	2	517.2619018554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_CLAVHQSYI_	REV__ENSG00000085840|ENST00000371568|ORC1	51.33545320467046	0.2872990594074956	3				NaN	NaN	0	NaN	5711	4322	10032
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10036	30.524	NaN	1198.8	30	0	180.02	0.106				-1	LGNNNQAM	8	40	439.19514076513406	NaN	0	439.19549560546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_LGNNNQAM(Oxidation (M))_	DOCK4|p.K1325Nfs*6|1|0.17|ENSG00000128512|chr7:111765136-111765136|T/-|frameshift_variant;ENSG00000128512|ENST00000428084|DOCK4;ENST00000476846.1_7:111503332-111846439:-|nuORF;nc|ENSG00000128512|Q8N1I0-2|DOCK4;nc|ENSG00000128512|Q8N1I0|DOCK4	35.200714571348534	1.7418937515398478	3				NaN	NaN	0	NaN	5712	4322	10032
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10037	30.526	NaN	1437.1	30	0	115.92	0.106			+	6951	CPKKCMERV	9	56	547.2708361694499	1092.5271194056998	2	547.27099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_CPKKCMERV_	REV__ENST00000274000.9_2_4:113189630-113189738:+|nuORF	27.882242232435846	0.5426732730940306	3				NaN	NaN	0	NaN	5713	4322	10032
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10038	30.527	NaN	547	30	0	94.788	0.106				-1	 	0	30	321.70543372701974	NaN	0	322.19378662109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5714	4322	10032
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10039	30.529	NaN	870.7	30	0	93.382	0.037			+	-1	MLYIAPLLAL	10	50	567.334833893055	NaN	0	567.3346557617188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_M(Oxidation (M))LYIAPLLAL_	REV__ENC1|p.G499Vfs*26|1|0.12|ENSG00000171617|chr5:74634990-74634990|C/-|frameshift_variant;REV__ENC1|p.R348Gfs*39|1|0.42|ENSG00000171617|chr5:74635445-74635445|C/-|frameshift_variant;REV__ENC1|p.S350Lfs*37|1|0.18|ENSG00000171617|chr5:74635439-74635439|C/-|frameshift_variant;REV__ENSG00000171617|ENST00000302351|ENC1;REV__nc|ENSG00000171617|O14682-2|ENC1	26.79610172149135	0.4121907004225123	3				NaN	NaN	0	NaN	5715	4322	10032
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10044	30.544	NaN	10700	30	0	1759.1	0.214			+	24101	LEKKLTSP	8	76	458.27943945197177	914.5443259707436	2	458.2788391113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LEKKLTSP_	REV__ENSG00000138835|ENST00000695401|RGS3;REV__ENST00000488620.5_1_9:116327559-116353744:+|nuORF;REV__nc|ENSG00000138835|P49796-1|RGS3;REV__nc|ENSG00000138835|P49796-4|RGS3;REV__nc|ENSG00000138835|P49796-6|RGS3;REV__nc|ENSG00000138835|P49796|RGS3	84.9155231211612	0.2928622555056503	3				NaN	NaN	0	NaN	5717	4325	10043
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10045	30.547	NaN	4904.5	30	0	1991.3	0.106	+			27115	MAPERVASL	9	60	487.2606846706726	972.5068164081453	2	487.26025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MAPERVASL_	ENSG00000158169|ENST00000289081|FANCC;FANCC|p.V449Cfs*22|1|0.07|ENSG00000158169|chr9:95107254-95107254|C/-|frameshift_variant	51.52775601994872	0.28504342437107444	3				NaN	NaN	0	NaN	5718	4325	10043
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10046	30.549	NaN	4520.5	30	0	749.52	0.106	+			13987	GSCSDFQFK	9	65	538.2299337587061	1074.4453145842122	2	538.229736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_GSC(Carbamidomethyl (C))SDFQFK_	ENSG00000124429|ENST00000262753|POF1B;nc|ENSG00000124429|Q8WVV4-1|POF1B	104.0567914643314	0.03506238181059741	3				NaN	NaN	0	NaN	5719	4325	10043
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10047	30.551	NaN	3189.9	30	0	323.98	0.106	+			25514	LPSRPGWMC	9	72	552.2596378768332	1102.5047228204662	2	552.259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_LPSRPGWMC(Carbamidomethyl (C))_	ENST00000236137.9_1_1:169454847-169455060:-|nuORF	65.80317337860623	0.1652391959156183	3				NaN	NaN	0	NaN	5720	4325	10043
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10048	30.553	NaN	1227.1	30	0	117.46	0.106				-1	 	0	44	414.25344849722705	826.4923440612541	2	414.25274658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5721	4325	10043
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10049	30.554	NaN	1584.9	30	0	186.83	0.106				-1	LHALEAWT	8	56	491.75405092093246	NaN	0	491.7530212402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LHALEAWT_	ENST00000229795.7_2_6:36078312-36078393:+|nuORF	35.200714571348534	1.7418937515398478	3				NaN	NaN	0	NaN	5722	4325	10043
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10050	30.556	NaN	1420.1	30	0	133.64	0.035	+			50442	YADPVNAHY	9	58	525.2380378905312	1048.4615228478624	2	525.2378540039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YADPVNAHY_	ENSG00000119314|ENST00000374257|PTBP3;nc|ENSG00000119314|O95758-1|PTBP3;nc|ENSG00000119314|O95758-2|PTBP3;nc|ENSG00000119314|O95758-4|PTBP3;nc|ENSG00000119314|O95758-5|PTBP3;nc|ENSG00000119314|O95758-7|PTBP3;nc|ENSG00000119314|O95758|PTBP3	37.15910966729921	0.4535818937225704	3				NaN	NaN	0	NaN	5723	4325	10043
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10055	30.57	NaN	4501.5	30	0	403.92	0.214	+			20521	KFIDTTSKF	9	73	543.7950148146348	1085.5754766960695	2	543.7955932617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KFIDTTSKF_	ENSG00000100316|ENST00000216146|RPL3;ENSG00000140986|ENST00000268661|RPL3L;ENST00000417615.1_1_14:99439218-99439536:-|nuORF;ENST00000473638.5_1_22:39708982-39709710:-|nuORF	128.60217544463768	0.015992218256422188	3				NaN	NaN	0	NaN	5725	4328	10054
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10056	30.574	NaN	9689.3	30	0	1766.5	0.106				-1	 	0	69	471.73813943858477	941.4617259439696	2	471.7373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5726	4328	10054
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10057	30.576	NaN	7047.8	30	0	1461.5	0.106	+			1341	AETRAGLTL	9	70	466.26424099049507	930.5139290477902	2	466.2637939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AETRAGLTL_	ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;nc|ENSG00000185164|Q5JPE7-3|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2;NOMO1|p.P1102Hfs*42|1|0.36|ENSG00000103512|chr16:14886838-14886838|C/-|frameshift_variant	80.45461616416974	0.09558281504443908	3				NaN	NaN	0	NaN	5727	4328	10054
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10058	30.578	NaN	3258.5	30	0	663.77	0.106			+	41484	SVNVLHLI	8	58	447.7744264808728	893.5343000285457	2	447.77362060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVNVLHLI_	REV__ENSG00000163075|ENST00000413369|CFAP221;REV__nc|ENSG00000163075|Q4G0U5-4|CFAP221	51.33545320467046	0.5859736979383976	3				NaN	NaN	0	NaN	5728	4328	10054
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10059	30.579	NaN	4249.6	30	0	812.75	0.106	+			12574	GEGTFGRVV	9	58	461.2433396110754	920.4721262889508	2	461.2432556152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GEGTFGRVV_	ENSG00000176444|ENST00000368361|CLK2;ENST00000497188.1_1_1:155234069-155238352:-|nuORF;nc|ENSG00000176444|P49760-3|CLK2	77.31757898189308	0.1091473830098891	3				NaN	NaN	0	NaN	5729	4328	10054
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10060	30.581	NaN	2278.4	30	0	674.61	0.106			+	18942	IVNQINLL	8	53	463.78731870928647	925.560084485373	2	463.7867126464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IVNQINLL_	REV__tr|U7T2T6|U7T2T6_FUSNUMATEfamilymultidrugresistanceproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00453PE=4SV=1	40.5726180659479	0.6527593143185008	3				NaN	NaN	0	NaN	5730	4328	10054
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10061	30.583	NaN	3959.8	30	0	2074.3	0.036			+	31304	QIKFLKISP	9	48	358.5622456408667	1072.6649075228001	3	358.56195068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QIKFLKISP_	REV__ENST00000286181.7_1_2:201886800-201887648:-|nuORF	31.529811441608018	0.5085848003137583	3				NaN	NaN	0	NaN	5731	4328	10054
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10068	30.599	NaN	8581.1	30	0	1961.4	0.214	+			50534	YAPVHADDL	9	75	500.740887239894	999.467221546588	2	500.7405090332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YAPVHADDL_	ENSG00000064651|ENST00000262461|SLC12A2;ENST00000504416.5_1_5:127493760-127503560:+|nuORF;ENST00000509616.1_1_5:127493760-127507455:+|nuORF;nc|ENSG00000064651|P55011-3|SLC12A2;SLC12A2|p.E1119Rfs*7|1|0.47|ENSG00000064651|chr5:128184417-128184418|-/A|frameshift_variant;SLC12A2|p.P1171Sfs*18|1|0.38|ENSG00000064651|chr5:128186498-128186499|-/TC|frameshift_variant	102.7733458925114	0.03637199559902695	3				NaN	NaN	0	NaN	5735	4331	10067
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10069	30.603	NaN	5660.9	30	0	877.7	0.106	+			39916	STMAIIVNK	9	65	488.7788163393603	975.5430797455206	2	488.7783508300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STMAIIVNK_	ENSG00000082898|ENST00000401558|XPO1;ENST00000428210.5_1_2:61705957-61719950:-|nuORF;ENST00000461407.5_1_2:61712881-61715780:-|nuORF;ENST00000492182.5_1_2:61710065-61713073:-|nuORF	134.81075121484326	0.012914550297035062	3				NaN	NaN	0	NaN	5736	4331	10067
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10070	30.605	NaN	5693.1	30	0	613.46	0.106			+	26849	LVVRCAGVLH	10	69	533.8124626155824	1065.6103722979647	2	533.8125610351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LVVRCAGVLH_	REV__ENST00000236671.6_2_11:1774065-1774194:-|nuORF	45.9519527083369	0.4943008177357963	3				NaN	NaN	0	NaN	5737	4331	10067
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10071	30.607	NaN	3596.1	30	0	1686.2	0.106			+	49442	VVVLAGREAF	10	41	354.21018089226664	1059.6087132769999	3	354.209716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVVLAGREAF_	REV__ENSG00000133835|ENST00000510025|HSD17B4;REV__ENST00000511186.5_1_5:118788168-118811542:+|nuORF;REV__ENST00000515235.6_1_5:118788237-118827866:+|nuORF;REV__HSD17B4|p.L703Ifs*15|1|0.06|ENSG00000133835|chr5:119536530-119536531|-/GAAAAATA|frameshift_variant	31.529811441608018	0.6223461015008678	3				NaN	NaN	0	NaN	5738	4331	10067
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10072	30.609	NaN	6065.8	30	0	2418.5	0.106	+			49259	VVNYEDLAAR	10	60	575.2983041650475	1148.582055396895	2	575.2978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVNYEDLAAR_	ENSG00000073111|ENST00000265056|MCM2;ENST00000474964.5_1_3:127323572-127340613:+|nuORF;ENST00000477668.5_1_3:127323572-127337961:+|nuORF	39.252832667884924	0.5560298534376815	3				NaN	NaN	0	NaN	5739	4331	10067
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10073	30.61	NaN	2361.3	30	0	249.46	0.106			+	8518	EATLSKSDKI	10	67	546.2998552370257	NaN	0	546.3007202148438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EATLSKSDKI_	REV__ENSG00000186472|ENST00000333891|PCLO;REV__nc|ENSG00000186472|Q9Y6V0-6|PCLO;REV__PCLO|p.E1944Sfs*8|1|0.34|ENSG00000186472|chr7:82955124-82955124|T/-|frameshift_variant;REV__PCLO|p.K2442Sfs*2|4|0.29|ENSG00000186472|chr7:82953628-82953628|T/-|frameshift_variant;REV__PCLO|p.K3621Ifs*26|1|0.04|ENSG00000186472|chr7:82949726-82949727|-/CCAGATA|frameshift_variant;REV__PCLO|p.K4306Gfs*8|1|0.04|ENSG00000186472|chr7:82915067-82915070|TTTT/-|frameshift_variant;REV__PCLO|p.M3036Tfs*24|1|0.06|ENSG00000186472|chr7:82951481-82951482|-/G|frameshift_variant;REV__PCLO|p.N4248Kfs*31|1|0.28|ENSG00000186472|chr7:82915242-82915243|-/T|frameshift_variant;REV__PCLO|p.P1234Afs*11|1|0.31|ENSG00000186472|chr7:82966089-82966090|-/T|frameshift_variant;REV__PCLO|p.P2408Lfs*36|1|0.44|ENSG00000186472|chr7:82953730-82953730|G/-|frameshift_variant;REV__PCLO|p.Q3062Tfs*25|1|0.2|ENSG00000186472|chr7:82951405-82951406|-/G|frameshift_variant;REV__PCLO|p.S1913Vfs*9|1|0.32|ENSG00000186472|chr7:82955216-82955216|T/-|frameshift_variant;REV__PCLO|p.T3933Nfs*47|1|0.06|ENSG00000186472|chr7:82916188-82916189|-/T|frameshift_variant;REV__PCLO|p.T5069Qfs*20|1|0.11|ENSG00000186472|chr7:82760722-82760722|T/-|frameshift_variant;REV__PCLO|p.V1883Ffs*29|1|0.09|ENSG00000186472|chr7:82955307-82955307|T/-|frameshift_variant;REV__PCLO|p.Y3007Lfs*2|1|0.28|ENSG00000186472|chr7:82951935-82951936|-/A|frameshift_variant	40.05817265558897	0.3684561582319974	3				NaN	NaN	0	NaN	5740	4331	10067
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10074	30.612	NaN	3943.9	30	0	388.4	0.036	+			25510	LPSPVTAQKY	10	69	552.3083743424252	1102.6021957516502	2	552.8104858398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LPSPVTAQKY_	ENSG00000167658|ENST00000309311|EEF2;ENST00000598182.5_1_19:3980752-3982305:-|nuORF	37.50817390946774	0.5721060100277453	3				NaN	NaN	0	NaN	5741	4331	10067
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10081	30.628	NaN	3001	30	0	992.18	0.214				-1	MLPLVLCAA	9	58	494.2720919676556	986.5296310021113	2	494.2717590332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_MLPLVLC(Carbamidomethyl (C))AA_	CNIH3|p.S13P|1|0.12|ENSG00000143786|chr1:224617211-224617211|T/C|missense_variant	39.021493756699265	0.43173687394350213	3				NaN	NaN	0	NaN	5745	4334	10080
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10082	30.632	NaN	2578.7	30	0	303.16	0.106	+			42940	TEIQQQSAL	9	63	509.263802639725	1016.51305234625	2	509.2645263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEIQQQSAL_	ENSG00000182934|ENST00000332118|SRPRA;ENST00000528744.5_1_11:126137442-126138699:-|nuORF;nc|ENSG00000182934|P08240-2|SRPRA	59.93077597824379	0.21419174904018318	3				NaN	NaN	0	NaN	5746	4334	10080
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10083	30.634	NaN	2531.3	30	0	315.95	0.106	+			46115	VDGNRQII	8	64	457.75628602482163	NaN	0	457.7561950683594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VDGNRQII_	ENSG00000105388|ENST00000221992|CEACAM5;nc|ENSG00000105388|P06731-2|CEACAM5	31.954861631926434	1.7418937515398478	3				NaN	NaN	0	NaN	5747	4334	10080
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10084	30.636	NaN	2645.8	30	0	689.55	0.106			+	26954	LYHKAYVSAP	10	40	383.54188092182227	1147.6038133656668	3	383.5414123535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LYHKAYVSAP_	REV__ENST00000596710.1_1_19:21934351-21934702:+|nuORF	35.15202426646627	0.5927656479315102	3				NaN	NaN	0	NaN	5748	4334	10080
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10085	30.638	NaN	2092.9	30	0	490.8	0.106	+			29331	NYSIVGGNP	9	57	460.7274198232933	919.4402867133866	2	460.72747802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NYSIVGGNP_	ENSG00000169851|ENST00000695919|PCDH7;nc|ENSG00000169851|O60245-2|PCDH7;nc|ENSG00000169851|O60245|PCDH7;PCDH7|p.D918Ifs*209|1|0.36|ENSG00000169851|chr4:30724168-30724168|A/-|frameshift_variant;PCDH7|p.H835Tfs*53|1|0.16|ENSG00000169851|chr4:31142537-31142537|C/-|frameshift_variant;PCDH7|p.K1017Nfs*110|1|0.13|ENSG00000169851|chr4:30724467-30724467|A/-|frameshift_variant	47.657333605630114	0.33044192980041115	3				NaN	NaN	0	NaN	5749	4334	10080
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10086	30.639	NaN	1404.3	30	0	136.81	0.106			+	6738	CARPRCPQAAL	11	62	593.3041492793413	1184.5937456254826	2	593.30419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_CARPRCPQAAL_	REV__ENST00000518479.5_2_8:28196600-28196786:+|nuORF	47.657333605630114	0.4531673460382624	3				NaN	NaN	0	NaN	5750	4334	10080
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10087	30.641	NaN	3515.5	30	0	744.26	0.032	+			3956	ATATLHVL	8	61	413.24566090870826	824.4767688842165	2	413.2449951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATATLHVL_	ENSG00000081818|ENST00000194152|PCDHB4;ENSG00000112852|ENST00000194155|PCDHB2;ENSG00000113205|ENST00000231130|PCDHB3;ENSG00000113209|ENST00000231134|PCDHB5;ENSG00000113211|ENST00000231136|PCDHB6;ENSG00000113212|ENST00000231137|PCDHB7;ENSG00000120322|ENST00000239444|PCDHB8;ENSG00000120327|ENST00000239449|PCDHB14;ENSG00000120328|ENST00000239450|PCDHB12;ENSG00000177839|ENST00000316105|PCDHB9;ENSG00000187372|ENST00000341948|PCDHB13;ENSG00000272674|ENST00000609684|PCDHB16;nc|ENSG00000120327|Q9Y5E9-2|PCDHB14;nc|ENSG00000120328|Q9Y5F1-2|PCDHB12;nc|ENSG00000290894|Q96TA0|PCDHB18P;PCDHB8|p.G781Wfs*9|1|0.43|ENSG00000120322|chr5:141180370-141180371|-/T|frameshift_variant	57.81127852772723	0.5234495074909924	3				NaN	NaN	0	NaN	5751	4334	10080
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10091	30.655	NaN	7028.1	30	0	1343.3	0.214				-1	 	0	55	413.26374549567953	824.5129380581591	2	413.2632751464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5752	4337	10090
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10092	30.659	NaN	2063	30	0	190.04	0.106	+			46475	VETGKDAVVM	10	55	524.7704142804988	1047.5262756277975	2	524.7693481445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VETGKDAVVM_	MYBPC2|p.V72M|1|0.52|ENSG00000086967|chr19:50436029-50436029|G/A|missense_variant	37.81151784470057	0.569310847604193	3				NaN	NaN	0	NaN	5753	4337	10090
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10093	30.661	NaN	1602.2	30	0	330.6	0.106	+			13967	GSAQGMDSMLK	11	60	562.7581976182543	NaN	0	562.7576904296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GSAQGMDSMLK_	ENSG00000153046|ENST00000397588|CDYL;ENST00000472453.5_1_6:4776866-4954287:+|nuORF;nc|ENSG00000153046|Q9Y232-3|CDYL;nc|ENSG00000153046|Q9Y232-4|CDYL;nc|ENSG00000153046|Q9Y232|CDYL	38.714083909724	0.3928837412686107	3				NaN	NaN	0	NaN	5754	4337	10090
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10094	30.662	NaN	2172.4	30	0	341.15	0.034			+	11469	FNNVKKVN	8	65	481.7742300818764	NaN	0	481.7740478515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FNNVKKVN_	REV__TTK|p.S162Vfs*9|1|0.34|ENSG00000112742|chr6:80010822-80010822|A/-|frameshift_variant	35.200714571348534	1.7418937515398478	3				NaN	NaN	0	NaN	5755	4337	10090
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10098	30.676	NaN	4358	30	0	323.34	0.214	+			49530	VYANGIRNI	9	70	510.28505191600976	1018.5555508988195	2	510.2851867675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYANGIRNI_	ENSG00000145495|ENST00000274140|MARCHF6;nc|ENSG00000145495|O60337-5|MARCHF6;nc|ENSG00000145495|O60337-6|MARCHF6	107.00750918261382	0.032051501805654005	3				NaN	NaN	0	NaN	5756	4340	10097
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10099	30.68	NaN	3749.7	30	0	775.26	0.106	+			13577	GLTWILMN	8	54	482.25079702432294	962.4870411154459	2	482.24981689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_GLTWILM(Oxidation (M))N_	ENST00000367033.3_1_1:208417094-208417160:-|nuORF	71.29570347882199	0.39610197767395533	3				NaN	NaN	0	NaN	5757	4340	10097
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10100	30.682	NaN	2999	30	0	714.13	0.106			+	-1	YSLLMSAM	8	60	466.2171308568216	930.4197087804432	2	466.21673583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_YSLLMSAM(Oxidation (M))_	REV__tr|U7T4V1|U7T4V1_FUSNUCPA1familymonovalentcation:H+antiporterOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00189PE=4SV=1	35.200714571348534	0.6875396545722289	3				NaN	NaN	0	NaN	5758	4340	10097
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10101	30.684	NaN	2377.2	30	0	436.72	0.106			+	24014	LEDNEKEKL	9	65	559.2907565795443	1116.5669602258886	2	559.2918090820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LEDNEKEKL_	REV__ENSG00000147202|ENST00000324765|DIAPH2;REV__nc|ENSG00000147202|O60879-2|DIAPH2;REV__nc|ENSG00000147202|O60879-3|DIAPH2	54.776311868738084	0.25715957988447635	3				NaN	NaN	0	NaN	5759	4340	10097
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10102	30.686	NaN	3022	30	0	391.61	0.034	+			46162	VDVDGGRSL	9	62	459.23826545082983	916.4619779684597	2	459.2381591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VDVDGGRSL_	ENSG00000115425|ENST00000265322|PECR;nc|ENSG00000115425|Q9BY49-2|PECR	40.77816245573522	0.41113185337114944	3				NaN	NaN	0	NaN	5760	4340	10097
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10107	30.7	NaN	5780.6	30	0	1055.3	0.214			+	19356	KAKRQCRN	8	70	502.2825269397679	1002.5505009463358	2	502.2821044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAKRQCRN_	REV__nc|nan|Q8WVX3-2|C4orf3	40.5726180659479	0.6527593143185008	3				NaN	NaN	0	NaN	5762	4343	10106
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10108	30.703	NaN	3906.1	30	0	432.09	0.106			+	9682	ELVSASSLL	9	54	459.76101381504674	917.5074746968935	2	459.760498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ELVSASSLL_	REV__ENSG00000181143|ENST00000397910|MUC16;REV__MUC16|p.F10843Sfs*11|1|0.22|ENSG00000181143|chr19:8938427-8938427|A/-|frameshift_variant;REV__MUC16|p.H3632Pfs*17|1|0.13|ENSG00000181143|chr19:8965875-8965876|-/G|frameshift_variant;REV__MUC16|p.I2885Dfs*9|1|0.28|ENSG00000181143|chr19:8972486-8972487|-/C|frameshift_variant;REV__MUC16|p.K6604Rfs*26|1|0.27|ENSG00000181143|chr19:8956959-8956959|T/-|frameshift_variant;REV__MUC16|p.L2546Kfs*23|1|0.04|ENSG00000181143|chr19:8973503-8973504|-/CCTT|frameshift_variant;REV__MUC16|p.L8270Wfs*63|1|0.04|ENSG00000181143|chr19:8951962-8951963|-/ACCA|frameshift_variant;REV__MUC16|p.N2936Tfs*6|1|0.17|ENSG00000181143|chr19:8972332-8972332|T/-|frameshift_variant;REV__MUC16|p.N9430Tfs*13|1|0.14|ENSG00000181143|chr19:8948481-8948481|T/-|frameshift_variant;REV__MUC16|p.S4774Ffs*12|1|0.01|ENSG00000181143|chr19:8962451-8962452|-/AC|frameshift_variant;REV__MUC16|p.S6098Wfs*23|1|0.17|ENSG00000181143|chr19:8958477-8958478|-/GGTGACATCTCTTGGCCAACTGACCCTGGACACATCAACC|frameshift_variant;REV__MUC16|p.S6614Lfs*30|1|0.04|ENSG00000181143|chr19:8956931-8956932|-/A|frameshift_variant;REV__MUC16|p.S7713Lfs*5|1|0.45|ENSG00000181143|chr19:8953634-8953634|G/-|frameshift_variant;REV__MUC16|p.T7968Nfs*2|1|0.41|ENSG00000181143|chr19:8952867-8952868|-/T|frameshift_variant;REV__MUC16|p.T8791Qfs*38|1|0.31|ENSG00000181143|chr19:8950403-8950403|G/-|frameshift_variant	53.351449002276354	0.2690372970092375	3				NaN	NaN	0	NaN	5763	4343	10106
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10109	30.705	NaN	1980	30	0	220.02	0.106	+			11908	FVAEQKVEY	9	64	556.785010517229	1111.555468101258	2	556.7849731445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FVAEQKVEY_	ENSG00000114867|ENST00000346169|EIF4G1;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;ENST00000460829.5_1_3:184046782-184052693:+|nuORF;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1	80.45461616416974	0.09558281504443908	3				NaN	NaN	0	NaN	5764	4343	10106
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10110	30.707	NaN	3046.5	30	0	938.09	0.106	+			30831	QEEQTRVAL	9	68	537.2836470973232	1072.5527412614463	2	537.2838134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QEEQTRVAL_	ENSG00000138180|ENST00000371485|CEP55;ENST00000496302.1_1_10:95278654-95279576:+|nuORF;nc|ENSG00000138180|Q53EZ4-2|CEP55	69.6276240434122	0.14239879520340665	3				NaN	NaN	0	NaN	5765	4343	10106
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10111	30.709	NaN	1417.2	30	0	368.31	0.037			+	7196	DAHSNILDEL	10	59	563.7729696796591	1125.5313864261182	2	564.2734985351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DAHSNILDEL_	REV__ENSG00000148400|ENST00000651671|NOTCH1;REV__NOTCH1|p.Q2403Sfs*19|1|0.51|ENSG00000148400|chr9:136496532-136496532|G/-|frameshift_variant	26.69291269510374	0.6618461711292317	3				NaN	NaN	0	NaN	5766	4343	10106
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10117	30.725	NaN	12287	30	0	3159	0.214			+	26947	LYGKVQEL	8	68	475.2716654936553	948.5287780541106	2	475.27099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LYGKVQEL_	REV__ENSG00000163817|ENST00000358525|SLC6A20;REV__nc|ENSG00000163817|Q9NP91-2|SLC6A20	93.19546047674547	0.2677966331495483	3				NaN	NaN	0	NaN	5769	4346	10116
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10118	30.729	NaN	3600.4	30	0	399.1	0.106	+			41198	SVLDLSVHK	9	67	499.28793935695217	996.5613257807044	2	499.2872619628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVLDLSVHK_	ENSG00000116731|ENST00000311066|PRDM2;nc|ENSG00000116731|Q13029-2|PRDM2;nc|ENSG00000116731|Q13029-3|PRDM2;nc|ENSG00000116731|Q13029-5|PRDM2;PRDM2|p.G1390Efs*14|1|0.21|ENSG00000116731|chr1:13781963-13781964|GG/-|frameshift_variant;PRDM2|p.N1426Ifs*3|1|0.17|ENSG00000116731|chr1:13782065-13782065|A/-|frameshift_variant;PRDM2|p.P1648Qfs*14|1|0.24|ENSG00000116731|chr1:13782731-13782731|G/-|frameshift_variant	112.10723106719422	0.02684780151337622	3				NaN	NaN	0	NaN	5770	4346	10116
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10119	30.731	NaN	2013	30	0	164.93	0.106	+			957	AEKAFVSV	8	47	425.73689990636854	NaN	0	425.7367858886719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEKAFVSV_	ABCC3|p.L968Afs*31|1|0.33|ENSG00000108846|chr17:50675920-50675921|-/G|frameshift_variant;ENSG00000108846|ENST00000285238|ABCC3;ENST00000502426.5_1_17:48736553-48755440:+|nuORF;nc|ENSG00000108846|O15438-2|ABCC3;nc|ENSG00000108846|O15438-4|ABCC3	67.49366992349736	1.7418937515398478	3				NaN	NaN	0	NaN	5771	4346	10116
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10120	30.732	NaN	1875.2	30	0	234.01	0.106			+	25950	LSIDQLRP	8	53	471.274791856049	940.535030778898	2	471.2742004394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSIDQLRP_	REV__ENST00000314994.4_1_16:90038368-90038497:-|nuORF	32.81241826257853	0.7059802730411993	3				NaN	NaN	0	NaN	5772	4346	10116
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10121	30.734	NaN	2174.4	30	0	318.09	0.106	+			39929	STMEQLVEK	9	69	532.7689718597084	1063.5233907862166	2	532.7684326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STMEQLVEK_	ENSG00000133812|ENST00000256190|SBF2;ENST00000533770.5_1_11:9861043-10215451:-|nuORF;nc|ENSG00000133812|Q86WG5-3|SBF2;SBF2|p.E1445Sfs*15|1|0.09|ENSG00000133812|chr11:9808111-9808111|T/-|frameshift_variant	53.08895987439943	0.27122541748218487	3				NaN	NaN	0	NaN	5773	4346	10116
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10122	30.736	NaN	1144.3	30	0	202.54	0.106			+	11273	FISTEHNY	8	51	505.73280205817974	1009.4510511831595	2	505.73291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FISTEHNY_	REV__ENSG00000169435|ENST00000307439|RASSF6;REV__nc|ENSG00000169435|Q6ZTQ3-3|RASSF6;REV__nc|ENSG00000169435|Q6ZTQ3|RASSF6;REV__RASSF6|p.K253Nfs*25|1|0.16|ENSG00000169435|chr4:73582195-73582195|T/-|frameshift_variant	27.882242232435846	0.7440473649773525	3				NaN	NaN	0	NaN	5774	4346	10116
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10123	30.738	NaN	1815.2	30	0	199.11	0.036	+			17236	HVPAILQYL	9	58	527.3074137202727	NaN	0	527.3077392578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HVPAILQYL_	ENSG00000120800|ENST00000261637|UTP20;UTP20|p.A1865Sfs*12|1|0.08|ENSG00000120800|chr12:101356982-101356983|-/ATCCTTTAGTC|frameshift_variant	26.79610172149135	0.34227917631780574	3				NaN	NaN	0	NaN	5775	4346	10116
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10131	30.756	NaN	3414.3	30	0	487.87	0.214	+			450	AAVGYIMEK	9	58	491.25711790684545	NaN	0	491.2569274902344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAVGYIMEK_	ENSG00000111361|ENST00000424014|EIF2B1	71.87747018426188	0.0992163553043454	3				NaN	NaN	0	NaN	5780	4349	10130
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10132	30.759	NaN	6612.3	30	0	702.69	0.106	+			15193	GTSQLYVYR	9	73	543.7831282153529	1085.5517034975057	2	543.7826538085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTSQLYVYR_	CPSF1|p.A1319Pfs*42|2|0.23|ENSG00000071894|chr8:144393943-144393943|C/-|frameshift_variant;CPSF1|p.P950Lfs*6|1|0.13|ENSG00000071894|chr8:144396478-144396478|G/-|frameshift_variant;CPSF1|p.V640Wfs*20|1|0.36|ENSG00000071894|chr8:144398110-144398110|G/-|frameshift_variant;ENSG00000071894|ENST00000616140|CPSF1	78.26377905018397	0.10505600812668463	3				NaN	NaN	0	NaN	5781	4349	10130
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10133	30.761	NaN	1977	30	0	507.28	0.106	+			5580	AVATALGLK	9	45	422.2686906804954	842.5228284277908	2	422.2684631347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVATALGLK_	ENSG00000107819|ENST00000393459|SFXN3	68.78682469695295	0.14603441672067394	3				NaN	NaN	0	NaN	5782	4349	10130
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10134	30.763	NaN	2609.9	30	0	241.31	0.106			+	9850	EPTITAVSR	9	57	487.26929299341515	972.5240330536303	2	487.2689514160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EPTITAVSR_	REV__ENSG00000130508|ENST00000252804|PXDN;REV__nc|ENSG00000130508|Q92626-2|PXDN;REV__PXDN|p.C857Afs*5|2|0.33|ENSG00000130508|chr2:1649212-1649212|G/-|frameshift_variant;REV__PXDN|p.E1339Lfs*66|1|0.26|ENSG00000130508|chr2:1639361-1639362|-/AG|frameshift_variant;REV__PXDN|p.G470Rfs*19|1|0.14|ENSG00000130508|chr2:1664962-1664963|-/T|frameshift_variant;REV__PXDN|p.N1190Mfs*12|1|0.22|ENSG00000130508|chr2:1648211-1648211|T/-|frameshift_variant;REV__PXDN|p.N1194Tfs*8|1|0.25|ENSG00000130508|chr2:1648199-1648199|T/-|frameshift_variant;REV__PXDN|p.N865Mfs*25|3|0.42|ENSG00000130508|chr2:1649188-1649188|G/-|frameshift_variant;REV__PXDN|p.R1242Pfs*22|1|0.07|ENSG00000130508|chr2:1644636-1644637|-/AG|frameshift_variant	41.42661286455405	0.403525789677298	3				NaN	NaN	0	NaN	5783	4349	10130
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10135	30.765	NaN	1832.4	30	0	1008.8	0.106	+			15660	GVMRIGLVAK	10	32	348.55156867767084	1042.6328766332126	3	348.551513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GVMRIGLVAK_	ENSG00000165209|ENST00000348403|STRBP;ENST00000407982.6_1_9:125930502-125941310:-|nuORF;nc|ENSG00000165209|Q96SI9-2|STRBP	33.921630207806714	0.6028135429846169	3				NaN	NaN	0	NaN	5784	4349	10130
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10136	30.767	NaN	1162.6	30	0	380.22	0.038	+			50266	WRAVIQVRQ	9	35	385.8953813447522	NaN	0	385.8953857421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_WRAVIQVRQ_	ENST00000439704.1_1_7:63369621-63370485:-|nuORF	20.94693142431847	0.3660861156085067	3				NaN	NaN	0	NaN	5785	4349	10130
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10137	30.767	NaN	1793.3	30	0	109.65	0.141	+			11379	FLLKPIAEAP	10	59	549.8318515764013	1097.6491502196025	2	549.8323364257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FLLKPIAEAP_	ENST00000491588.1_1_22:22123495-22123630:-|nuORF	38.753607047826485	0.5606299674732264	3				NaN	NaN	0	NaN	5786	4349	10130
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10144	30.787	NaN	8128.4	30	0	608.61	0.214	+			8352	EALFELEKN	9	78	546.7821751680004	1091.5497974028008	2	546.7821655273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EALFELEKN_	ENST00000397412.7_1_16:1724055-1724097:+|nuORF	84.9155231211612	0.07920012719736333	3				NaN	NaN	0	NaN	5790	4352	10143
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10145	30.79	NaN	2203.7	30	0	152.03	0.106			+	31101	QFQQKLAL	8	55	488.28466011438667	974.5547672955734	2	488.2840881347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QFQQKLAL_	REV__ENSG00000221843|ENST00000447166|C2orf16	40.5726180659479	0.6527593143185008	3				NaN	NaN	0	NaN	5791	4352	10143
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10146	30.792	NaN	2220.7	30	0	168.18	0.106	+			37182	SIYPITRTQ	9	63	539.7986368663455	1077.582720799491	2	539.7984619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SIYPITRTQ_	ENSG00000169519|ENST00000407364|METTL15;nc|ENSG00000169519|A6NJ78-2|METTL15	51.19269402634007	0.2889735674168909	3				NaN	NaN	0	NaN	5792	4352	10143
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10147	30.794	NaN	1084.5	30	0	172.96	0.106			+	-1	RRRAADQL	8	38	343.19775355579407	NaN	0	343.1980285644531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))RRRAADQL_	REV__ENSG00000156787|ENST00000287380|TBC1D31;REV__nc|ENSG00000156787|Q96DN5-2|TBC1D31;REV__nc|ENSG00000156787|Q96DN5-3|TBC1D31;REV__TBC1D31|p.E769D|1|0.05|ENSG00000156787|chr8:123130234-123130234|A/T|missense_variant	18.324413293986947	1.7418937515398478	3				NaN	NaN	0	NaN	5793	4352	10143
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10148	30.796	NaN	1970.4	30	0	135.66	0.106	+			11351	FLGCLNIPV	9	68	516.781305174889	1031.5480574165779	2	516.781494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_FLGC(Carbamidomethyl (C))LNIPV_	ENSG00000007516|ENST00000426824|BAIAP3;ENST00000567825.3_1_16:1384662-1392395:+|nuORF;nc|ENSG00000007516|O94812-2|BAIAP3;nc|ENSG00000007516|O94812-3|BAIAP3;nc|ENSG00000007516|O94812-5|BAIAP3;nc|ENSG00000007516|O94812-7|BAIAP3;nc|ENSG00000007516|O94812|BAIAP3	50.0245360154114	0.3026755932229825	3				NaN	NaN	0	NaN	5794	4352	10143
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10149	30.798	NaN	1137.7	30	0	238.3	0.106	+			47814	VSKEHPVVI	9	26	336.53416444223257	NaN	0	336.5342712402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VSKEHPVVI_	CAD|p.N1541Mfs*15|1|0.33|ENSG00000084774|chr2:27237773-27237773|A/-|frameshift_variant;CAD|p.Q1172Tfs*37|1|0.41|ENSG00000084774|chr2:27234113-27234114|-/C|frameshift_variant;ENSG00000084774|ENST00000264705|CAD	12.959181472943097	0.3931207604263714	3				NaN	NaN	0	NaN	5795	4352	10143
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10150	30.8	NaN	2200.7	30	0	251.25	0.038	+			31620	QMEEMKTRH	9	57	595.2750763193851	NaN	0	595.2740478515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QMEEMKTRH_	AKAP9|p.L1203Yfs*16|1|0.24|ENSG00000127914|chr7:92014319-92014319|T/-|frameshift_variant;AKAP9|p.Q3083Nfs*28|1|0.15|ENSG00000127914|chr7:92089389-92089390|-/TGAATATCAAGCAGCTATGGAATGCC|frameshift_variant;AKAP9|p.T1942Lfs*3|3|0.18|ENSG00000127914|chr7:92062328-92062328|A/-|frameshift_variant;ENSG00000127914|ENST00000356239|AKAP9;ENST00000493453.1_1_7:91570251-91670224:+|nuORF;nc|ENSG00000127914|Q99996-1|AKAP9;nc|ENSG00000127914|Q99996-3|AKAP9;nc|ENSG00000127914|Q99996-4|AKAP9;nc|ENSG00000127914|Q99996-5|AKAP9;nc|ENSG00000127914|Q99996-6|AKAP9	29.14955571784316	0.3303970763161698	3				NaN	NaN	0	NaN	5796	4352	10143
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10160	30.821	NaN	4546.3	30	0	2105	0.214	+			32346	QTYEEALYK	9	68	572.7799628524116	1143.545372771623	2	572.7802124023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QTYEEALYK_	ENSG00000106541|ENST00000419304|AGR2	40.77816245573522	0.41113185337114944	3				NaN	NaN	0	NaN	5803	4355	10159
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10161	30.825	NaN	5093.4	30	0	1200.8	0.106	+			19604	KDFIRPKL	8	63	508.8164831627284	1015.6184133922568	2	508.8157958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KDFIRPKL_	ENSG00000133083|ENST00000360631|DCLK1;nc|ENSG00000133083|O15075-2|DCLK1	60.97194046774394	0.49215940876911696	3				NaN	NaN	0	NaN	5804	4355	10159
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10162	30.827	NaN	3911.3	30	0	2015.5	0.106	+			7284	DAPSGLQLAGL	11	67	521.2825707722644	1040.5505886113287	2	521.282470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DAPSGLQLAGL_	RUFY4|p.Q231L|1|0.28|ENSG00000188282|chr2:218075184-218075184|A/T|missense_variant	38.753607047826485	0.5749975102143227	3				NaN	NaN	0	NaN	5805	4355	10159
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10163	30.829	NaN	3144.5	30	0	572.45	0.106	+			29267	NYGDQVQHF	9	65	554.2469092251571	1106.479265517114	2	554.246826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NYGDQVQHF_	ENSG00000154016|ENST00000284154|GRAP	104.01359247289065	0.03510646158778409	3				NaN	NaN	0	NaN	5806	4355	10159
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10164	30.831	NaN	6670.3	30	0	307.68	0.106	+			799	AEFRKLSIQ	9	68	546.3140826754633	1090.6136124177265	2	546.3140869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEFRKLSIQ_	tr|U7SPB5|U7SPB5_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01801PE=4SV=1	52.936696900407355	0.27249468807391813	3				NaN	NaN	0	NaN	5807	4355	10159
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10165	30.832	NaN	2781.7	30	0	241.75	0.036	+			13055	GEYQRMGVM	9	64	535.7422443027776	1069.4699356723552	2	535.741455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GEYQRMGVM_	ENSG00000171848|ENST00000304567|RRM2;nc|ENSG00000171848|P31350-2|RRM2	60.11826168202944	0.21262886028301267	3				NaN	NaN	0	NaN	5808	4355	10159
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10166	30.833	NaN	3735.3	30	0	327.97	0.14	+			36096	SEKGQVEVF	9	71	511.76323366762017	1021.5119144020404	2	511.7637634277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SEKGQVEVF_	ENSG00000105447|ENST00000253237|GRWD1	70.8162118820467	0.13725933411854815	3				NaN	NaN	0	NaN	5809	4355	10159
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10172	30.851	NaN	2140.5	30	0	283.52	0.215	+			35020	SACSFTFSK	9	59	517.7341289089231	1033.4537048846462	2	517.7343139648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SAC(Carbamidomethyl (C))SFTFSK_	ENSG00000131375|ENST00000253693|CAPN7;ENST00000443567.5_1_3:15282348-15292515:+|nuORF	40.05817265558897	0.419577045485086	3				NaN	NaN	0	NaN	5812	4358	10171
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10173	30.854	NaN	4363	30	0	1710.1	0.106	+			49627	VYIDKVRSL	9	36	364.8855527774267	1091.63482893248	3	364.88519287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYIDKVRSL_	ENSG00000113368|ENST00000261366|LMNB1;LMNB1|p.Q183Tfs*5|1|0.35|ENSG00000113368|chr5:126805594-126805595|-/A|frameshift_variant	36.446750945000026	0.4619375763483977	3				NaN	NaN	0	NaN	5813	4358	10171
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10174	30.856	NaN	2045.9	30	0	222.06	0.106			+	2486	APPTLGSAPD	10	52	463.2364170136259	924.4582810940518	2	463.7398986816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_APPTLGSAPD_	REV__ENST00000263370.2_1_19:41246176-41246248:+|nuORF	42.396135135203025	0.5270658956260207	3				NaN	NaN	0	NaN	5814	4358	10171
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10175	30.858	NaN	1844.4	30	0	110.36	0.106			+	30709	QDESVLLIA	9	60	494.2720919676556	986.5296310021113	2	494.7740783691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QDESVLLIA_	REV__BTN3A3|p.R360G|1|0.6|ENSG00000111801|chr6:26451734-26451734|A/G|missense_variant;REV__ENSG00000111801|ENST00000244519|BTN3A3;REV__ENST00000508906.6_3_6:26376811-26377501:+|nuORF;REV__nc|ENSG00000111801|O00478-2|BTN3A3	35.200714571348534	0.47427825964483533	3				NaN	NaN	0	NaN	5815	4358	10171
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10176	30.86	NaN	2843.2	30	0	307.97	0.106	+			8212	EADVFSNLPK	10	66	560.2894808576607	1118.5644087821213	2	560.2894287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EADVFSNLPK_	ENSG00000170820|ENST00000406846|FSHR;FSHR|p.T555Wfs*89|1|0.07|ENSG00000170820|chr2:48963159-48963160|-/TCCAA|frameshift_variant;nc|ENSG00000170820|P23945-2|FSHR;nc|ENSG00000170820|P23945-3|FSHR;nc|ENSG00000170820|P23945-4|FSHR	37.81151784470057	0.569310847604193	3				NaN	NaN	0	NaN	5816	4358	10171
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10177	30.862	NaN	1073.3	30	0	130.84	0.106				-1	QPYRCQHLE	9	54	615.7882789155722	1229.5620048979442	2	615.7870483398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_QPYRC(Carbamidomethyl (C))QHLE_	ENSG00000187720|ENST00000261862|THSD4;ENST00000567838.1_1_15:71952820-72059070:+|nuORF;nc|ENSG00000187720|Q6ZMP0-4|THSD4	21.9598887501803	0.5980208138527809	3				NaN	NaN	0	NaN	5817	4358	10171
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10178	30.864	NaN	627.65	30	0	103.19	0.033			+	7152	DAFAVGVR	8	31	417.7271423339844	NaN	0	417.7271423339844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DAFAVGVR_	REV__ENSG00000186628|ENST00000334574|FSD2;REV__nc|ENSG00000186628|A1L4K1-2|FSD2	24.20275056022122	1.7418937515398478	3				NaN	NaN	0	NaN	5818	4358	10171
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10185	30.881	NaN	7659.8	30	0	847.97	0.214	+			50432	YACEVTHQGL	10	72	560.7584778568801	1119.50240278056	2	560.7589721679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YACEVTHQGL_	nc|ENSG00000211592|P01834|IGKC	159.27591364854348	0.006848530601684873	3				NaN	NaN	0	NaN	5822	4361	10184
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10186	30.885	NaN	4081.6	30	0	388.33	0.106			+	10270	ETLRISFAM	9	74	534.2812798337515	1066.5480067343028	2	535.2804565429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ETLRISFAM_	REV__tr|U7T5M2|U7T5M2_FUSNUAntitoxinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00013PE=4SV=1	68.78682469695295	0.14603441672067394	3				NaN	NaN	0	NaN	5823	4361	10184
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10187	30.887	NaN	2976.7	30	0	924.3	0.106	+			184	AALAPLLAGL	10	53	455.2923284150879	908.5701038969759	2	455.2918701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AALAPLLAGL_	SLC37A1|p.G479A|1|0.47|ENSG00000160190|chr21:42574830-42574830|G/C|missense_variant	35.200714571348534	0.5923680232273616	3				NaN	NaN	0	NaN	5824	4361	10184
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10188	30.889	NaN	2157.4	30	0	161.21	0.106			+	1077	AELAALHAAY	10	66	515.2723468948267	NaN	0	515.2720947265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AELAALHAAY_	REV__ENSG00000091622|ENST00000262483|PITPNM3;REV__nc|ENSG00000091622|Q9BZ71-2|PITPNM3;REV__nc|ENSG00000091622|Q9BZ71-3|PITPNM3	51.19269402634007	0.2980620950593832	3				NaN	NaN	0	NaN	5825	4361	10184
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10189	30.89	NaN	1234.3	30	0	107.7	0.033	+			564	ADGLSLKSL	9	52	452.26047753447517	NaN	0	452.26080322265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ADGLSLKSL_	MSH6|p.F882Lfs*24|1|0.31|ENSG00000116062|chr2:47800626-47800626|T/-|frameshift_variant	27.882242232435846	0.3367954786602879	3				NaN	NaN	0	NaN	5826	4361	10184
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10195	30.906	NaN	3549.2	30	0	431.38	0.214			+	43518	TGSSFTNVL	9	54	463.2364170136259	924.4582810940518	2	463.2347106933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TGSSFTNVL_	REV__ENST00000471680.1_1_1:118476036-118476099:+|nuORF	87.75429964447693	0.0711966946989736	3				NaN	NaN	0	NaN	5829	4364	10194
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10196	30.91	NaN	1921.9	30	0	204.45	0.106				-1	 	0	56	477.29303307354223	952.5715132138845	2	477.2921447753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5830	4364	10194
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10197	30.912	NaN	1962.1	30	0	183.67	0.106				-1	MAKLWFKF	8	75	543.7950485523987	1085.5755441715974	2	543.7948608398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))AKLWFKF_	ENSG00000075035|ENST00000547525|WSCD2;nc|ENSG00000075035|Q2TBF2-2|WSCD2	44.53106598305862	0.628196326904373	3				NaN	NaN	0	NaN	5831	4364	10194
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10198	30.914	NaN	1164.3	30	0	145.33	0.106	+			48970	VVGEISNI	8	35	415.734233601809	NaN	0	415.7337646484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVGEISNI_	tr|U7T216|U7T216_FUSNUTIGR03545familyproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00432PE=4SV=1	40.5726180659479	1.7418937515398478	3				NaN	NaN	0	NaN	5832	4364	10194
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10199	30.916	NaN	1822	30	0	164.43	0.106	+			7626	DKIAEIIKED	10	62	587.3219846751558	1172.6294164171115	2	587.82275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DKIAEIIKED_	ENSG00000189241|ENST00000368608|TSPYL1	61.691277971877994	0.35045824941635534	3				NaN	NaN	0	NaN	5833	4364	10194
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10200	30.917	NaN	1812.9	30	0	241.7	0.106				-1	NQPKCPSMI	9	64	537.7571461573737	1073.4997393815472	2	537.7561645507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_NQPKC(Carbamidomethyl (C))PSMI_	ENST00000462119.5_1_6:111628768-111636625:-|nuORF;L1PA5_dup2765|chr4:69723015-69726028:+|1.903650506224423|0.171219590839865|3.47|472.0|26|1|sense;L1PA8_dup4283|chr8:127182799-127184390:+|1.237907765894274|0.1348659474275502|3.2|479.0|12|1|sense	29.14955571784316	0.5308295550522326	3				NaN	NaN	0	NaN	5834	4364	10194
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10201	30.919	NaN	1761.5	30	0	206.13	0.034			+	28686	NMATFQPQ	8	57	468.713982736141	NaN	0	468.7142028808594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NMATFQPQ_	REV__ENSG00000198121|ENST00000683809|LPAR1;REV__LPAR1|p.F267Lfs*14|1|0.27|ENSG00000198121|chr9:110875715-110875715|A/-|frameshift_variant	55.50420428727701	1.7418937515398478	3				NaN	NaN	0	NaN	5835	4364	10194
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10205	30.933	NaN	1809.4	30	0	184.69	0.214	+			3177	ASISGMEITK	10	63	518.7717489717265	1035.528945010253	2	518.771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASISGMEITK_	ENST00000547564.1_1_12:44196258-44199673:-|nuORF	41.42661286455405	0.5359995577334734	3				NaN	NaN	0	NaN	5836	4367	10204
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10206	30.937	NaN	1520.5	30	0	210.67	0.106			+	18476	ISFLRDLSC	9	62	527.2719075338077	1052.5292621344154	2	527.2723388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ISFLRDLSC_	REV__ENST00000345732.8_1_11:60236054-60236291:+|nuORF	40.05817265558897	0.419577045485086	3				NaN	NaN	0	NaN	5837	4367	10204
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10207	30.939	NaN	3603.9	30	0	406.47	0.106	+			3763	ATAELIMSR	9	63	496.26583276018863	990.5171125871773	2	496.2664794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATAELIMSR_	ENSG00000105677|ENST00000222284|TMEM147;ENST00000477168.6_1_19:36036641-36037810:+|nuORF;ENST00000595467.1_1_19:36037522-36037810:+|nuORF;nc|ENSG00000105677|Q9BVK8-2|TMEM147	126.24258497203832	0.01742065577488747	3				NaN	NaN	0	NaN	5838	4367	10204
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10208	30.94	NaN	1105.3	30	0	205.14	0.106			+	22761	KVESAIIP	8	44	428.7607640095036	855.5069750858072	2	428.7605285644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KVESAIIP_	REV__ENSG00000184459|ENST00000300399|BPIFC;REV__nc|ENSG00000184459|Q8NFQ6-2|BPIFC	52.29916861842294	0.578018602984656	3				NaN	NaN	0	NaN	5839	4367	10204
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10209	30.942	NaN	1550.9	30	0	147.29	0.106				-1	LGAPPASFPY	10	60	531.2672892191628	NaN	0	531.2672729492188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LGAPPASFPY_	ENST00000582963.1_1_17:37885671-37885710:-|nuORF	47.91560031466742	0.31878035802558913	3				NaN	NaN	0	NaN	5840	4367	10204
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10210	30.944	NaN	1615.3	30	0	220.91	0.106			+	43383	TGFPRYEL	8	48	491.75405092093246	NaN	0	491.754150390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TGFPRYEL_	REV__DSCAM|p.G1997Afs*3|1|0.1|ENSG00000171587|chr21:40013083-40013083|C/-|frameshift_variant;REV__ENSG00000171587|ENST00000400454|DSCAM;REV__nc|ENSG00000171587|O60469-2|DSCAM	29.14955571784316	1.7418937515398478	3				NaN	NaN	0	NaN	5841	4367	10204
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10211	30.946	NaN	1868.6	30	0	131.28	0.035			+	18572	ISPFFLPDP	9	59	516.7737525551106	1031.5329521770211	2	517.2764892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ISPFFLPDP_	REV__ENST00000609401.5_1_X:62647883-62647997:-|nuORF	29.14955571784316	0.5308295550522326	3				NaN	NaN	0	NaN	5842	4367	10204
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10216	30.96	NaN	12301	30	0	2139.2	0.214	+			51393	YTNGKCVIL	9	74	534.2812798337515	1066.5480067343028	2	534.2818603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_YTNGKC(Carbamidomethyl (C))VIL_	ENSG00000071127|ENST00000499869|WDR1;ENST00000509600.1_1_4:10117520-10118290:-|nuORF;ENST00000514319.5_1_4:10110004-10118075:-|nuORF;nc|ENSG00000071127|O75083-3|WDR1	67.49366992349736	0.1516260258713357	3				NaN	NaN	0	NaN	5844	4370	10215
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10217	30.964	NaN	16396	30	0	1447.4	0.106				-1	 	0	74	474.2656556912613	946.5167584493227	2	474.26483154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5845	4370	10215
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10218	30.966	NaN	5448.6	30	0	699.14	0.106			+	18968	IVRGQRHR	8	68	511.31048560954883	1020.6064182858977	2	511.31011962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IVRGQRHR_	REV__ENSG00000205269|ENST00000379426|TMEM170B	57.81127852772723	0.5234495074909924	3				NaN	NaN	0	NaN	5846	4370	10215
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10219	30.968	NaN	1943.6	30	0	279.35	0.106	+			21333	KLTYIYIQK	9	68	585.3505966133426	1168.6866402934852	2	585.3505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KLTYIYIQK_	ENST00000383746.7_2_3:44396236-44396287:+|nuORF	53.08895987439943	0.27122541748218487	3				NaN	NaN	0	NaN	5847	4370	10215
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10220	30.969	NaN	2152.4	30	0	427.6	0.106	+			34022	RSLAQRWQ	8	60	522.789370912944	1043.564188892688	2	522.78955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RSLAQRWQ_	ENSG00000074755|ENST00000381638|ZZEF1	31.954861631926434	0.7126016770032289	3				NaN	NaN	0	NaN	5848	4370	10215
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10221	30.971	NaN	1733	30	0	220.08	0.106	+			16351	HELQEKLSPL	10	61	597.3301945530203	1192.6458361728405	2	597.3302001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HELQEKLSPL_	ENSG00000118137|ENST00000236850|APOA1	81.52500206392136	0.18316182710238588	3				NaN	NaN	0	NaN	5849	4370	10215
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10222	30.973	NaN	1500.8	30	0	418.37	0.035	+			7614	DKEHIQFLYER	11	52	493.2505894163693	NaN	0	493.2510681152344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DKEHIQFLYER_	ENSG00000171495|ENST00000399564|MROH2B;MROH2B|p.D1229Tfs*15|1|0.23|ENSG00000171495|chr5:41007378-41007378|C/-|frameshift_variant;nc|ENSG00000171495|Q7Z745-2|MROH2B	32.03412808689991	0.42265347483761584	3				NaN	NaN	0	NaN	5850	4370	10215
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10231	30.993	NaN	3028.6	30	0	480.03	0.214			+	27358	MIRIHMPL	8	58	505.78552305100567	1009.5564931688114	2	505.78460693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MIRIHMPL_	REV__ENST00000418944.1_1_2:110941632-110941998:+|nuORF	35.200714571348534	0.6875396545722289	3				NaN	NaN	0	NaN	5856	4373	10230
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10232	30.997	NaN	2095.9	30	0	257.58	0.106			+	6739	CASAMESSVL	10	56	499.2187633965898	996.4229738599796	2	499.21826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_CASAMESSVL_	REV__ENST00000367279.8_1_1:202128675-202129107:-|nuORF	58.78195531508484	0.37691818691852547	3				NaN	NaN	0	NaN	5857	4373	10230
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10233	30.999	NaN	1926.1	30	0	410.64	0.106	+			30700	QDAYDISQLR	10	56	604.7990047118199	1207.5834564904396	2	604.799072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QDAYDISQLR_	ENSG00000129910|ENST00000289746|CDH15	22.579656572578934	0.6954366826851017	3				NaN	NaN	0	NaN	5858	4373	10230
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10234	31	NaN	243.34	30	0	37.994	0.106	+			35334	SAPAAKPKR	9	16	309.1906127215396	NaN	0	309.1904602050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SAPAAKPKR_	ENSG00000189060|ENST00000340857|H1-0	12.206847966760668	0.39566704307768535	3				NaN	NaN	0	NaN	5859	4373	10230
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10235	31.002	NaN	1850.4	30	0	260.67	0.106			+	37385	SLFVNLGIN	9	64	488.7774863766153	975.5404198200306	2	488.77777099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SLFVNLGIN_	REV__ENSG00000132436|ENST00000433017|FIGNL1;REV__FIGNL1|p.K309Sfs*16|2|0.21|ENSG00000132436|chr7:50446362-50446362|T/-|frameshift_variant;REV__nc|ENSG00000132436|Q6PIW4-2|FIGNL1	44.116797842482775	0.37197099687881774	3				NaN	NaN	0	NaN	5860	4373	10230
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10236	31.004	NaN	3235.9	30	0	1506.1	0.106	+			10604	EYLTKVDKL	9	69	554.8165318212725	1107.618510709345	2	554.8165283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EYLTKVDKL_	ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000141367|Q00610-2|CLTC	62.107414245175825	0.1960472003779324	3				NaN	NaN	0	NaN	5861	4373	10230
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10237	31.006	NaN	1658.9	30	0	244.85	0.035			+	1571	AGHASRPSSL	10	57	491.75405092093246	NaN	0	491.7532653808594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AGHASRPSSL_	REV__BCL11A|p.L265Cfs*15|1|0.34|ENSG00000119866|chr2:60462119-60462119|G/-|frameshift_variant;REV__BCL11A|p.L360Sfs*61|3|0.26|ENSG00000119866|chr2:60461834-60461834|G/-|frameshift_variant;REV__BCL11A|p.S554Vfs*18|1|0.05|ENSG00000119866|chr2:60461252-60461253|-/C|frameshift_variant;REV__ENSG00000119866|ENST00000642384|BCL11A;REV__nc|ENSG00000119866|Q9H165-2|BCL11A;REV__nc|ENSG00000119866|Q9H165-3|BCL11A	52.936696900407355	0.28703625529470256	3				NaN	NaN	0	NaN	5862	4373	10230
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10243	31.022	NaN	2743.1	30	0	372.82	0.214	+			24239	LESYLPKIQ	9	57	545.8109075088367	1089.6072620844734	2	545.8111572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LESYLPKIQ_	ENSG00000003137|ENST00000001146|CYP26B1;nc|ENSG00000003137|Q9NR63-2|CYP26B1;nc|ENSG00000003137|Q9NR63-3|CYP26B1	63.53385203322761	0.18415635464017938	3				NaN	NaN	0	NaN	5865	4376	10242
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10244	31.025	NaN	1511.4	30	0	206.89	0.106	+			5679	AVDTEGLFGF	10	56	528.2560166560176	1054.497480378835	2	528.255615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVDTEGLFGF_	SLC35F6|p.G213D|1|0.16|ENSG00000213699|chr2:26776474-26776474|G/A|missense_variant	23.04248740728303	0.69165701907106	3				NaN	NaN	0	NaN	5866	4376	10242
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10245	31.027	NaN	1827.5	30	0	352.34	0.106				-1	KSVCIDINED	10	64	596.7787611169449	1191.5429693006897	2	596.778076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_KSVC(Carbamidomethyl (C))IDINED_	ENSG00000198774|ENST00000361228|RASSF9;RASSF9|p.E309Vfs*9|1|0.05|ENSG00000198774|chr12:85805084-85805085|-/AAATA|frameshift_variant;RASSF9|p.L310Sfs*7|1|0.05|ENSG00000198774|chr12:85805082-85805083|-/AAAGAGA|frameshift_variant	24.519189625965996	0.6795976720565101	3				NaN	NaN	0	NaN	5867	4376	10242
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10246	31.029	NaN	1476.4	30	0	96.767	0.034			+	17247	HVYEQSSL	8	55	481.73317255441054	961.4517921756211	2	481.7332458496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HVYEQSSL_	REV__DIAPH2|p.Q221Tfs*6|1|0.11|ENSG00000147202|chrX:96912394-96912395|-/A|frameshift_variant;REV__ENSG00000147202|ENST00000324765|DIAPH2;REV__nc|ENSG00000147202|O60879-2|DIAPH2;REV__nc|ENSG00000147202|O60879-3|DIAPH2	34.172542307311794	0.6954784234644539	3				NaN	NaN	0	NaN	5868	4376	10242
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10252	31.044	NaN	3521.1	30	0	593.13	0.214	+			7213	DAISKTYSY	9	62	524.2531262938703	1046.4916996545405	2	524.2538452148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DAISKTYSY_	ENSG00000140988|ENST00000343262|RPS2;ENST00000397318.4_1_X:40794237-40794825:-|nuORF;ENST00000438210.1_1_1:40428398-40429073:+|nuORF;ENST00000441047.1_1_17:51834352-51834658:-|nuORF;ENST00000443417.1_1_9:102879039-102879699:-|nuORF;ENST00000475555.1_1_4:144270430-144270667:-|nuORF;ENST00000494359.1_1_11:17250107-17250695:+|nuORF;ENST00000529806.5_1_16:2012098-2012518:-|nuORF;ENST00000532746.5_2_16:2012101-2013785:-|nuORF;ENST00000533872.5_1_16:2012101-2013018:-|nuORF;RPL18-RPS2|1|fusion	85.86182877749512	0.07653218437724067	3				NaN	NaN	0	NaN	5871	4379	10251
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10253	31.047	NaN	1875.3	30	0	184.42	0.106	+			12070	GAAGRPLEL	9	58	442.2535414797793	882.4925300263586	2	442.2530822753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GAAGRPLEL_	ENSG00000120802|ENST00000556029|TMPO;nc|ENSG00000120802|P42167-2|TMPO;TMPO|p.L427Cfs*13|1|0.4|ENSG00000120802|chr12:98547767-98547767|T/-|frameshift_variant;TMPO|p.L427Ffs*18|1|0.28|ENSG00000120802|chr12:98547766-98547767|-/T|frameshift_variant;TMPO|p.R409Tfs*36|1|0.06|ENSG00000120802|chr12:98547707-98547708|-/A|frameshift_variant	56.72105179125745	0.24094814563026265	3				NaN	NaN	0	NaN	5872	4379	10251
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10254	31.049	NaN	2111.3	30	0	168.43	0.106	+			27161	MCSLGDVDVN	10	65	526.7221558064208	NaN	0	526.7219848632812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MCSLGDVDVN_	NEDD4L|p.G854S|1|0.25|ENSG00000049759|chr18:58389097-58389097|G/A|missense_variant	54.776311868738084	0.27540594196716844	3				NaN	NaN	0	NaN	5873	4379	10251
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10255	31.051	NaN	1637.3	30	0	216.36	0.106	+			42540	TARQPLPI	8	49	448.27141134704806	NaN	0	448.271240234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TARQPLPI_	ENST00000537670.5_1_15:66855926-66858216:-|nuORF	37.15910966729921	1.7418937515398478	3				NaN	NaN	0	NaN	5874	4379	10251
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10256	31.053	NaN	1651.8	30	0	154.86	0.106	+			10959	FDYSSKENA	9	58	530.7313202175105	NaN	0	530.7310180664062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FDYSSKENA_	tr|U7SSG6|U7SSG6_FUSNUNH(3)-dependentNAD(+)synthetaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=nadEPE=3SV=1	44.377184641726394	0.24544280798894275	3				NaN	NaN	0	NaN	5875	4379	10251
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10257	31.055	NaN	1926.3	30	0	209.32	0.033	+			12750	GELEAAKAL	9	55	451.25405109208026	900.4935492509605	2	451.7559814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GELEAAKAL_	ENSG00000166888|ENST00000300134|STAT6;ENST00000555641.1_1_12:57499966-57502061:-|nuORF;nc|ENSG00000166888|P42226-2|STAT6;nc|ENSG00000166888|P42226-3|STAT6;STAT6|p.G815Efs*27|3|0.31|ENSG00000166888|chr12:57096672-57096672|C/-|frameshift_variant	51.19269402634007	0.2889735674168909	3				NaN	NaN	0	NaN	5876	4379	10251
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10264	31.071	NaN	3414.1	30	0	854.97	0.214	+			45011	TVEYTKTK	8	51	485.26665276595435	968.5187525987087	2	485.2655029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVEYTKTK_	ENST00000577104.1_1_17:52555182-52555515:+|nuORF	53.351449002276354	0.5676011784961348	3				NaN	NaN	0	NaN	5880	4382	10263
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10265	31.074	NaN	2188.5	30	0	330.04	0.106			+	-1	LTWTFALAA	9	59	518.2772801594507	NaN	0	518.277099609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LTWTFALAA_	REV__ENSG00000068001|ENST00000357750|HYAL2	31.954861631926434	0.3162336699109506	3				NaN	NaN	0	NaN	5881	4382	10263
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10266	31.076	NaN	1891.3	30	0	165.41	0.106				-1	 	0	70	502.2825269397679	1002.5505009463358	2	502.28131103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5882	4382	10263
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10267	31.078	NaN	1279.8	30	0	279.25	0.106				-1	VTLCRRPR	8	43	353.20637226390073	1056.5972873919022	3	353.2059020996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_VTLC(Carbamidomethyl (C))RRPR_	ENSG00000115419|ENST00000320717|GLS;ENST00000479552.1_1_2:191745810-191759998:+|nuORF;ENST00000496170.1_1_2:191745882-191760452:+|nuORF;GLS|p.L362Ffs*3|1|0.09|ENSG00000115419|chr2:190921153-190921154|-/T|frameshift_variant;nc|ENSG00000115419|O94925-2|GLS;nc|ENSG00000115419|O94925-3|GLS	23.04248740728303	0.7814162927298575	3				NaN	NaN	0	NaN	5883	4382	10263
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10268	31.08	NaN	1186.9	30	0	104.13	0.106	+			24811	LINVWIPS	8	55	471.27530856990126	940.5360642066025	2	471.2732849121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LINVWIPS_	ENSG00000048471|ENST00000566228|SNX29;nc|ENSG00000048471|Q8TEQ0-2|SNX29	31.954861631926434	0.7126016770032289	3				NaN	NaN	0	NaN	5884	4382	10263
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10269	31.082	NaN	1478.2	30	0	108.65	0.106	+			15279	GTTYPAETLSP	11	65	568.7756035890317	1135.5366542448633	2	568.7756958007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTTYPAETLSP_	ENSG00000138688|ENST00000679879|BLTP1;nc|ENSG00000138688|Q2LD37-4|BLTP1;nc|ENSG00000138688|Q2LD37-7|BLTP1;nc|ENSG00000138688|Q2LD37|BLTP1	39.252832667884924	0.5681665794958463	3				NaN	NaN	0	NaN	5885	4382	10263
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10270	31.083	NaN	1414	30	0	109.33	0.039			+	50068	WFTTSRPQPPP	11	58	657.3328869576818	NaN	0	657.332275390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_WFTTSRPQPPP_	REV__nc|ENSG00000211898|P01880-1|IGHD;REV__nc|ENSG00000211898|P01880|IGHD	25.125986553469783	0.45344013546260314	3				NaN	NaN	0	NaN	5886	4382	10263
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10277	31.1	NaN	5195.8	30	0	561.57	0.214	+			28307	NEFEATQKL	9	70	540.2722022932496	1078.5298516532991	2	540.2728271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NEFEATQKL_	ENSG00000165030|ENST00000297689|NFIL3	123.20810148215591	0.019257656778428764	3				NaN	NaN	0	NaN	5890	4385	10276
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10278	31.103	NaN	3637.2	30	0	382.55	0.106	+			4652	ATLQEALAH	9	65	477.25671935252285	952.4988857718457	2	477.2564392089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATLQEALAH_	ENSG00000137497|ENST00000393695|NUMA1;nc|ENSG00000137497|Q14980-2|NUMA1;nc|ENSG00000137497|Q14980-3|NUMA1;nc|ENSG00000137497|Q14980-4|NUMA1;NUMA1|p.K1766Rfs*2|1|0.39|ENSG00000137497|chr11:72007357-72007357|G/-|frameshift_variant;NUMA1|p.L1786Pfs*18|1|0.23|ENSG00000137497|chr11:72007295-72007296|-/G|frameshift_variant	90.60085204095205	0.06317133949006545	3				NaN	NaN	0	NaN	5891	4385	10276
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10279	31.105	NaN	1534.2	30	0	153.58	0.106	+			4046	ATDELSSALAK	11	55	553.2907215330482	1104.5668901328963	2	553.290771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATDELSSALAK_	ENSG00000073614|ENST00000399788|KDM5A;nc|ENSG00000073614|P29375-2|KDM5A	79.48907831485694	0.15663227531959176	3				NaN	NaN	0	NaN	5892	4385	10276
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10280	31.107	NaN	2780.3	30	0	203.16	0.036	+			8539	EAVKLCDSY	9	70	542.7527583409134	1083.4909637486267	2	542.7528686523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_EAVKLC(Carbamidomethyl (C))DSY_	ENSG00000125944|ENST00000302271|HNRNPR;HNRNPR|p.L367Qfs*19|1|0.05|ENSG00000125944|chr1:23313620-23313621|-/TTTAATCTCT|frameshift_variant;HNRNPR|p.W594Gfs*15|1|0.23|ENSG00000125944|chr1:23310575-23310576|CA/-|frameshift_variant;nc|ENSG00000125944|O43390-2|HNRNPR;nc|ENSG00000125944|O43390-3|HNRNPR;nc|ENSG00000125944|O43390-4|HNRNPR	98.62937762414208	0.04060045538121712	3				NaN	NaN	0	NaN	5893	4385	10276
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10286	31.122	NaN	1692.6	30	0	188.04	0.213	+			17303	IAECTFTKMR	10	60	600.300031292906	1198.585509652612	2	600.8020629882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IAECTFTKMR_	ENSG00000164932|ENST00000330295|CTHRC1;nc|ENSG00000164932|Q96CG8-2|CTHRC1;nc|ENSG00000164932|Q96CG8-3|CTHRC1	35.15202426646627	0.5927656479315102	3				NaN	NaN	0	NaN	5896	4388	10285
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10287	31.125	NaN	1508.4	30	0	198.17	0.106			+	43318	TGALLSLAPA	10	54	457.2717829339625	912.5290129347251	2	457.27142333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TGALLSLAPA_	REV__ENSG00000148204|ENST00000373631|CRB2;REV__nc|ENSG00000148204|Q5IJ48-2|CRB2	42.396135135203025	0.5270658956260207	3				NaN	NaN	0	NaN	5897	4388	10285
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10288	31.127	NaN	1239.2	30	0	133.42	0.039			+	33511	RKNYEHSKIQ	10	60	651.8495194488553	1301.6844859645105	2	651.8492431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RKNYEHSKIQ_	REV__CENPF|p.E663K|1|0.42|ENSG00000117724|chr1:214640325-214640325|G/A|missense_variant	38.753607047826485	0.5606299674732264	3				NaN	NaN	0	NaN	5898	4388	10285
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10294	31.142	NaN	7360.8	30	0	2861.7	0.214				-1	 	0	57	373.53847596562514	1117.5935984970754	3	373.5376892089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5901	4391	10293
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10295	31.145	NaN	4985.4	30	0	1577	0.106				-1	KKLERHCR	8	52	376.21394504103034	1125.6200057232911	3	376.2134094238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_KKLERHC(Carbamidomethyl (C))R_	ENSG00000113971|ENST00000337331|NPHP3;ENST00000471702.2_2_3:132363653-132416205:-|nuORF;ENST00000490993.5_1_3:132412532-132416205:-|nuORF;NPHP3|p.A707V|1|0.41|ENSG00000113971|chr3:132696782-132696782|G/A|missense_variant	17.364965105453717	0.7956685240855921	3				NaN	NaN	0	NaN	5902	4391	10293
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10296	31.147	NaN	4165.8	30	0	985.85	0.106			+	6948	CPIKLSAVKNI	11	57	395.90493622767747	1184.6929792832325	3	395.9040832519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_CPIKLSAVKNI_	REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-13|TTN;REV__nc|ENSG00000155657|Q8WZ42-2|TTN;REV__nc|ENSG00000155657|Q8WZ42-4|TTN;REV__nc|ENSG00000155657|Q8WZ42-5|TTN;REV__nc|ENSG00000155657|Q8WZ42-7|TTN;REV__nc|ENSG00000155657|Q8WZ42-8|TTN;REV__nc|ENSG00000155657|Q8WZ42|TTN;REV__TTN|p.A12650Gfs*4|1|0.4|ENSG00000155657|chr2:178633489-178633490|-/T|frameshift_variant;REV__TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;REV__TTN|p.D20259Rfs*40|1|0.44|ENSG00000155657|chr2:178583105-178583106|-/T|frameshift_variant;REV__TTN|p.D21555Ifs*6|1|0.33|ENSG00000155657|chr2:178576659-178576659|G/-|frameshift_variant;REV__TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;REV__TTN|p.D9026Afs*9|1|0.26|ENSG00000155657|chr2:178711205-178711208|CTGT/-|frameshift_variant;REV__TTN|p.E15132Sfs*22|1|0.27|ENSG00000155657|chr2:178612094-178612094|C/-|frameshift_variant;REV__TTN|p.E20392Dfs*6|1|0.04|ENSG00000155657|chr2:178582357-178582358|-/TTTAAAATTA|frameshift_variant;REV__TTN|p.E20392Kfs*4|1|0.02|ENSG00000155657|chr2:178582359-178582360|-/TTTT|frameshift_variant;REV__TTN|p.E9224Gfs*8|1|0.04|ENSG00000155657|chr2:178709697-178709698|-/TCTTATGATATCTTGAC|frameshift_variant;REV__TTN|p.F18705Lfs*8|1|0.37|ENSG00000155657|chr2:178590687-178590687|A/-|frameshift_variant;REV__TTN|p.G12742Vfs*2|1|0.05|ENSG00000155657|chr2:178632983-178632983|C/-|frameshift_variant;REV__TTN|p.G14712Dfs*11|1|0.37|ENSG00000155657|chr2:178614341-178614341|G/-|frameshift_variant;REV__TTN|p.G19920Afs*12|1|0.42|ENSG00000155657|chr2:178584961-178584961|G/-|frameshift_variant;REV__TTN|p.G22029Efs*22|2|0.13|ENSG00000155657|chr2:178575125-178575125|T/-|frameshift_variant;REV__TTN|p.I10495Nfs*4|1|0.37|ENSG00000155657|chr2:178685288-178685289|-/T|frameshift_variant;REV__TTN|p.I24998Nfs*2|1|0.35|ENSG00000155657|chr2:178566216-178566217|-/T|frameshift_variant;REV__TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;REV__TTN|p.I9225Cfs*34|1|0.06|ENSG00000155657|chr2:178709695-178709696|-/ATATCCATGAGCA|frameshift_variant;REV__TTN|p.K10923Rfs*104|2|0.23|ENSG00000155657|chr2:178679362-178679362|T/-|frameshift_variant;REV__TTN|p.K11381Nfs*25|1|0.07|ENSG00000155657|chr2:178671133-178671133|T/-|frameshift_variant;REV__TTN|p.K11556Sfs*15|1|0.39|ENSG00000155657|chr2:178652287-178652287|T/-|frameshift_variant;REV__TTN|p.K14271Qfs*5|1|0.02|ENSG00000155657|chr2:178617351-178617352|-/G|frameshift_variant;REV__TTN|p.K26626Nfs*34|1|0.34|ENSG00000155657|chr2:178561331-178561331|T/-|frameshift_variant;REV__TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;REV__TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;REV__TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant;REV__TTN|p.N13487Tfs*49|1|0.34|ENSG00000155657|chr2:178621335-178621335|T/-|frameshift_variant;REV__TTN|p.N15496Ifs*16|1|0.09|ENSG00000155657|chr2:178610116-178610116|T/-|frameshift_variant;REV__TTN|p.N7648Tfs*27|1|0.32|ENSG00000155657|chr2:178719598-178719598|T/-|frameshift_variant;REV__TTN|p.N8964Tfs*27|1|0.11|ENSG00000155657|chr2:178711988-178711988|T/-|frameshift_variant;REV__TTN|p.P16126Rfs*3|1|0.25|ENSG00000155657|chr2:178607301-178607302|TG/-|frameshift_variant;REV__TTN|p.P22810Hfs*10|1|0.03|ENSG00000155657|chr2:178572780-178572781|-/AAAT|frameshift_variant;REV__TTN|p.V10632Yfs*16|1|0.16|ENSG00000155657|chr2:178683254-178683254|T/-|frameshift_variant;REV__TTN|p.V11008Sfs*13|1|0.33|ENSG00000155657|chr2:178678146-178678147|-/T|frameshift_variant;REV__TTN|p.V11345Ffs*4|1|0.4|ENSG00000155657|chr2:178672044-178672044|T/-|frameshift_variant;REV__TTN|p.V13823*|1|0.28|ENSG00000155657|chr2:178620027-178620027|C/-|frameshift_variant;REV__TTN|p.V22573Cfs*4|2|0.31|ENSG00000155657|chr2:178573492-178573492|C/-|frameshift_variant;REV__TTN|p.V27442Cfs*4|1|0.05|ENSG00000155657|chr2:178558107-178558108|-/A|frameshift_variant	45.908116695636124	0.4771019740774998	3				NaN	NaN	0	NaN	5903	4391	10293
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10297	31.149	NaN	1242.2	30	0	231.9	0.106			+	14412	GTAPLVILSH	10	33	336.5344771505459	1006.5816020518378	3	336.5343017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTAPLVILSH_	REV__ENST00000444374.1_1_9:92316696-92316852:+|nuORF	20.94693142431847	0.7087701759873708	3				NaN	NaN	0	NaN	5904	4391	10293
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10298	31.151	NaN	2086.9	30	0	292.84	0.106			+	23972	LDVDHTAI	8	55	442.2304403909554	882.4463278487108	2	442.2298278808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LDVDHTAI_	REV__B4GALT7|p.M161T|1|0.14|ENSG00000027847|chr5:177607370-177607370|T/C|missense_variant	60.29395666154354	0.49887135096048313	3				NaN	NaN	0	NaN	5905	4391	10293
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10299	31.153	NaN	2280.4	30	0	405.3	0.106	+			34335	RTPLETLVV	9	54	514.3116920927399	1026.6088312522797	2	514.3106689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RTPLETLVV_	HERV35I-int_dup77|chr3:106541134-106546233:+|1.3860853119714591|0.1976016791882729|2.81|468.0|191|3|sense	47.91560031466742	0.327412564698279	3				NaN	NaN	0	NaN	5906	4391	10293
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10300	31.154	NaN	1448	30	0	185.47	0.038	+			51552	YYEEQHPEL	9	56	604.2675451556098	1206.5205373780195	2	604.267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YYEEQHPEL_	ENSG00000008517|ENST00000525643|IL32;nc|ENSG00000008517|P24001-3|IL32;nc|ENSG00000008517|P24001-4|IL32;nc|ENSG00000008517|P24001-5|IL32;nc|ENSG00000008517|P24001-6|IL32;nc|ENSG00000008517|P24001|IL32	60.11826168202944	0.21262886028301267	3				NaN	NaN	0	NaN	5907	4391	10293
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10309	31.174	NaN	32008	30	0	9236.2	0.214				-1	 	0	71	374.22104265127234	1119.641298554017	3	374.220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5913	4394	10308
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10310	31.178	NaN	4350	30	0	864.62	0.106	+			21094	KKPQKYKP	8	69	508.8164831627284	1015.6184133922568	2	508.8166809082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KKPQKYKP_	GRIA2|p.S531Y|1|0.24|ENSG00000120251|chr4:157336495-157336495|C/A|missense_variant	40.5726180659479	0.6527593143185008	3				NaN	NaN	0	NaN	5914	4394	10308
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10311	31.18	NaN	6488.2	30	0	1507.4	0.106	+			28359	NEKQISQVL	9	69	529.7963845613085	1057.578216189417	2	529.79638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NEKQISQVL_	ARHGAP35|p.F938Lfs*10|1|0.18|ENSG00000160007|chr19:46921484-46921484|T/-|frameshift_variant;ARHGAP35|p.K945Rfs*3|1|0.4|ENSG00000160007|chr19:46921503-46921503|A/-|frameshift_variant;ARHGAP35|p.Y859Ifs*28|1|0.09|ENSG00000160007|chr19:46921245-46921245|T/-|frameshift_variant;ENSG00000160007|ENST00000672722|ARHGAP35	76.16968421966216	0.11411088698345859	3				NaN	NaN	0	NaN	5915	4394	10308
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10312	31.182	NaN	4616.1	30	0	434.81	0.106	+			7266	DALVQSLMI	9	69	503.2681603092993	1004.5217676853986	2	503.2679748535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_DALVQSLM(Oxidation (M))I_	OR7G1|p.V163I|1|0.13|ENSG00000161807|chr19:9115277-9115277|C/T|missense_variant	69.6276240434122	0.14239879520340665	3				NaN	NaN	0	NaN	5916	4394	10308
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10313	31.183	NaN	8368.7	30	0	1166.8	0.106	+			50399	YAAGVHSVL	9	71	458.74824039241895	915.4819278516379	2	458.74798583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YAAGVHSVL_	AP5Z1|p.Q696Rfs*6|3|0.43|ENSG00000242802|chr7:4790814-4790814|C/-|frameshift_variant;ENSG00000242802|ENST00000649063|AP5Z1;ENST00000490487.1_1_7:4829477-4830874:+|nuORF	92.19062340807069	0.05868925795948219	3				NaN	NaN	0	NaN	5917	4394	10308
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10314	31.185	NaN	5184.2	30	0	1865.2	0.036	+			26091	LSMVMVFIL	9	70	526.7969337120595	1051.579314490919	2	526.7974243164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSMVMVFIL_	ENSG00000166073|ENST00000561100|GPR176;nc|ENSG00000166073|Q14439-2|GPR176;nc|ENSG00000166073|Q14439-3|GPR176	32.81241826257853	0.4965981579233955	3				NaN	NaN	0	NaN	5918	4394	10308
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10315	31.186	NaN	1909.8	30	0	263.72	0.142				-1	IRVCLDREE	9	61	595.3042707614845	1188.593988589769	2	595.30419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_IRVC(Carbamidomethyl (C))LDREE_	tr|U7T2Z8|U7T2Z8_FUSNUPhosphoenolpyruvate-proteinphosphotransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00339PE=3SV=1	58.78195531508484	0.22376836668196862	3				NaN	NaN	0	NaN	5919	4394	10308
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10324	31.208	NaN	3874.1	30	0	1056.4	0.214			+	25247	LNIINQAWF	9	62	559.80379256789	1117.59303220258	2	559.8038330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LNIINQAWF_	REV__ENSG00000122779|ENST00000343526|TRIM24;REV__nc|ENSG00000122779|O15164-2|TRIM24;REV__TRIM24|p.R1009Kfs*10|1|0.49|ENSG00000122779|chr7:138584817-138584818|-/A|frameshift_variant	37.15910966729921	0.4535818937225704	3				NaN	NaN	0	NaN	5925	4397	10323
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10325	31.211	NaN	4560.4	30	0	448.29	0.106	+			12787	GELTGEVRM	9	63	496.2479236208358	990.4812943084717	2	496.247314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GELTGEVRM_	ENSG00000128591|ENST00000325888|FLNC;FLNC|p.H2471Tfs*58|1|0.18|ENSG00000128591|chr7:128856767-128856767|C/-|frameshift_variant;FLNC|p.V1896Wfs*57|1|0.04|ENSG00000128591|chr7:128851472-128851472|G/-|frameshift_variant;nc|ENSG00000128591|Q14315-2|FLNC	78.26377905018397	0.10505600812668463	3				NaN	NaN	0	NaN	5926	4397	10323
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10326	31.213	NaN	2992.5	30	0	231.99	0.106	+			50146	WIVPLDNLTK	10	71	599.8439130188489	1197.6732731044976	2	599.8436279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_WIVPLDNLTK_	ENSG00000128567|ENST00000378555|PODXL;ENST00000446198.5_1_7:131189072-131193853:-|nuORF;ENST00000484346.1_1_7:131189072-131190857:-|nuORF;nc|ENSG00000128567|O00592-2|PODXL	72.87924865735499	0.25379688738724415	3				NaN	NaN	0	NaN	5927	4397	10323
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10327	31.215	NaN	2656.5	30	0	1023.3	0.106	+			16792	HPDAPMSQVY	10	66	572.758629355687	1143.502705778174	2	572.7593383789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HPDAPMSQVY_	ENSG00000123562|ENST00000441076|MORF4L2;ENSG00000185787|ENST00000426013|MORF4L1;ENST00000560710.1_1_15:79184565-79186592:+|nuORF;nc|ENSG00000185787|Q9UBU8-3|MORF4L1;nc|ENSG00000185787|Q9UBU8|MORF4L1	30.317721548370564	0.6322445173429027	3				NaN	NaN	0	NaN	5928	4397	10323
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10328	31.217	NaN	3023.7	30	0	461.92	0.106				-1	ASCQYSLLK	9	65	535.2719570503588	1068.5293611675174	2	535.7732543945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_ASC(Carbamidomethyl (C))QYSLLK_	ENSG00000100731|ENST00000304743|PCNX1;ENSG00000135749|ENST00000258229|PCNX2;ENSG00000197136|ENST00000355703|PCNX3;ENST00000324142.4_1_1:233337898-233388268:-|nuORF;ENST00000475463.6_1_1:233201380-233353905:-|nuORF;ENST00000519530.1_1_1:233353734-233362997:-|nuORF;nc|ENSG00000100731|Q96RV3-3|PCNX1;nc|ENSG00000100731|Q96RV3-4|PCNX1;nc|ENSG00000135749|A6NKB5-2|PCNX2;nc|ENSG00000135749|A6NKB5-5|PCNX2;nc|ENSG00000197136|Q9H6A9-2|PCNX3	58.2462437865262	0.22823408064396822	3				NaN	NaN	0	NaN	5929	4397	10323
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10329	31.218	NaN	1866	30	0	162.03	0.037			+	-1	GCTTASAWVW	10	63	569.7536712667314	NaN	0	569.7536010742188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_GC(Carbamidomethyl (C))TTASAWVW_	REV__ENST00000478856.5_1_3:100053614-100067682:+|nuORF	38.80614096846853	0.372755673314885	3				NaN	NaN	0	NaN	5930	4397	10323
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10330	31.219	NaN	985.62	30	0	75.49	0.14	+			537	ADAVKKAR	8	42	429.76216131399167	857.5097696947834	2	429.76226806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ADAVKKAR_	ENSG00000114416|ENST00000357559|FXR1;ENST00000473375.1_1_3:180669142-180671642:+|nuORF;FXR1|p.N300Mfs*8|1|0.11|ENSG00000114416|chr3:180957832-180957832|A/-|frameshift_variant;FXR1|p.T526Sfs*13|1|0.07|ENSG00000114416|chr3:180970330-180970331|-/TCTGTATTATC|frameshift_variant;nc|ENSG00000114416|P51114-2|FXR1;nc|ENSG00000114416|P51114-3|FXR1	26.79610172149135	0.7524337208463756	3				NaN	NaN	0	NaN	5931	4397	10323
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10336	31.237	NaN	6973.7	30	0	1340.3	0.214	+			14375	GTAGNGWFNK	10	73	526.2517632515633	1050.4889735699264	2	526.251708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTAGNGWFNK_	ENST00000525241.1_1_11:35211476-35226207:+|nuORF;ENST00000534296.5_1_11:35211476-35226207:+|nuORF	95.81516180277367	0.09778090853194907	3				NaN	NaN	0	NaN	5934	4400	10335
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10337	31.24	NaN	3155.1	30	0	396.95	0.106	+			7576	DIKPSNIVF	9	65	516.7884491742024	1031.5623454152046	2	516.788818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DIKPSNIVF_	ENSG00000107968|ENST00000263056|MAP3K8;MAP3K8|p.H251N|1|0.31|ENSG00000107968|chr10:30450504-30450504|C/A|missense_variant;nc|ENSG00000107968|P41279-2|MAP3K8	58.78195531508484	0.22376836668196862	3				NaN	NaN	0	NaN	5935	4400	10335
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10338	31.242	NaN	3532.6	30	0	1219.5	0.034	+			43510	TGSLEPVKE	9	56	480.25647228180344	958.4983916304069	2	480.2564697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TGSLEPVKE_	ENSG00000156469|ENST00000287025|MTERF3;MTERF3|p.M298K|1|0.71|ENSG00000156469|chr8:96245864-96245864|A/T|missense_variant;nc|ENSG00000156469|Q96E29-2|MTERF3;nc|ENSG00000156469|Q96E29-3|MTERF3	56.72105179125745	0.24094814563026265	3				NaN	NaN	0	NaN	5936	4400	10335
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10344	31.258	NaN	2409.9	30	0	415.83	0.214	+			13027	GEVLRTNQF	9	65	532.2786286113777	1062.5427042895553	2	532.2791137695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEVLRTNQF_	ENSG00000125991|ENST00000348547|ERGIC3;nc|ENSG00000125991|Q9Y282-3|ERGIC3	46.45678178249821	0.34452392205506005	3				NaN	NaN	0	NaN	5939	4403	10343
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10345	31.262	NaN	2203.6	30	0	374.2	0.106			+	-1	ELSSCKQKL	9	66	546.7883937165936	NaN	0	546.7881469726562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_ELSSC(Carbamidomethyl (C))KQKL_	REV__ENSG00000182670|ENST00000418766|TTC3;REV__ENST00000399586.2_1_X:74960734-74966719:-|nuORF;REV__nc|ENSG00000182670|P53804-2|TTC3;REV__nc|ENSG00000182670|P53804-3|TTC3;REV__TTC3|p.E1565Rfs*14|1|0.21|ENSG00000182670|chr21:37182840-37182841|-/A|frameshift_variant;REV__TTC3|p.E779Kfs*5|2|0.34|ENSG00000182670|chr21:37151943-37151943|A/-|frameshift_variant;REV__TTC3|p.E779Rfs*18|1|0.33|ENSG00000182670|chr21:37151942-37151943|-/A|frameshift_variant	76.7741389293348	0.08243745921263976	3				NaN	NaN	0	NaN	5940	4403	10343
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10346	31.264	NaN	1707.5	30	0	180.73	0.106	+			14112	GSLNVTLEH	9	56	485.2537618409678	NaN	0	485.2538146972656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GSLNVTLEH_	ENSG00000119772|ENST00000321117|DNMT3A;nc|ENSG00000119772|Q9Y6K1-2|DNMT3A	63.53385203322761	0.134247007536971	3				NaN	NaN	0	NaN	5941	4403	10343
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10347	31.266	NaN	1136	30	0	146.86	0.106				-1	TPEHAASM	8	49	430.18256087804116	NaN	0	430.18231201171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_TPEHAASM(Oxidation (M))_	TP73|p.V93M|1|0.51|ENSG00000078900|chr1:3707639-3707639|G/A|missense_variant	26.79610172149135	1.7418937515398478	3				NaN	NaN	0	NaN	5942	4403	10343
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10348	31.267	NaN	1638.4	30	0	356.02	0.106	+			46635	VGAVALLIGP	10	47	455.2923284150879	908.5701038969759	2	455.292236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VGAVALLIGP_	ENSG00000112972|ENST00000325110|HMGCS1	26.79610172149135	0.6610034878437611	3				NaN	NaN	0	NaN	5943	4403	10343
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10349	31.269	NaN	1831	30	0	199.1	0.106	+			35376	SAPSTQQVL	9	53	465.74802679922476	NaN	0	465.7482604980469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SAPSTQQVL_	ENSG00000106290|ENST00000453269|TAF6;nc|ENSG00000106290|P49848-2|TAF6;nc|ENSG00000106290|P49848-3|TAF6;nc|ENSG00000106290|P49848-4|TAF6	47.95952297671804	0.22075498469600283	3				NaN	NaN	0	NaN	5944	4403	10343
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10350	31.271	NaN	1194.3	30	0	162.72	0.037				-1	MERSKLSELA	10	43	590.3048706054688	NaN	0	590.3048706054688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_M(Oxidation (M))ERSKLSELA_	CLEC16A|p.L611Wfs*11|4|0.33|ENSG00000038532|chr16:11047302-11047302|T/-|frameshift_variant;CLEC16A|p.Y604Ifs*18|1|0.23|ENSG00000038532|chr16:11044063-11044063|T/-|frameshift_variant;ENSG00000038532|ENST00000409790|CLEC16A;nc|ENSG00000038532|Q2KHT3-2|CLEC16A	24.519189625965996	0.41966695327750003	3				NaN	NaN	0	NaN	5945	4403	10343
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10356	31.287	NaN	5249	30	0	1712.3	0.214				-1	 	0	48	336.1913762769922	670.3681996207844	2	336.1911315917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5948	4406	10355
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10357	31.291	NaN	8554.8	30	0	894.2	0.106	+			35406	SAQSFFENK	9	77	529.251666270548	1056.4887796078958	2	529.251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAQSFFENK_	ENSG00000136758|ENST00000376016|YME1L1;nc|ENSG00000136758|Q96TA2-3|YME1L1;nc|ENSG00000136758|Q96TA2|YME1L1;YME1L1|p.N311Tfs*18|1|0.26|ENSG00000136758|chr10:27134053-27134053|T/-|frameshift_variant	120.27252224102466	0.02103478360410217	3				NaN	NaN	0	NaN	5949	4406	10355
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10358	31.293	NaN	4156	30	0	280.98	0.106	+			46375	VELAESRAL	9	72	494.27801059736476	986.5414682615295	2	494.2770080566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VELAESRAL_	ENST00000340533.8_2_18:71959085-71959217:-|nuORF	109.47833844074708	0.029530294723441826	3				NaN	NaN	0	NaN	5950	4406	10355
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10359	31.294	NaN	1604.5	30	0	127.59	0.106	+			20522	KFIDTTSKF	9	64	543.7950485523987	1085.5755441715974	2	543.7952270507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KFIDTTSKF_	ENSG00000100316|ENST00000216146|RPL3;ENSG00000140986|ENST00000268661|RPL3L;ENST00000417615.1_1_14:99439218-99439536:-|nuORF;ENST00000473638.5_1_22:39708982-39709710:-|nuORF	32.75053402867276	0.49717649897795874	3				NaN	NaN	0	NaN	5951	4406	10355
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10360	31.296	NaN	2204.7	30	0	600.91	0.106	+			10373	EVADELVA	8	44	423.2165195302951	844.4184861273902	2	423.2159118652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EVADELVA_	ENSG00000198176|ENST00000375370|TFDP1;ENST00000453595.1_1_X:36980271-36981156:-|nuORF;ENST00000544902.5_1_13:114277566-114294579:+|nuORF;nc|ENSG00000198176|Q14186-2|TFDP1	74.51659920185547	0.36926395944126233	3				NaN	NaN	0	NaN	5952	4406	10355
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10361	31.298	NaN	1825.3	30	0	272.02	0.034	+			31930	QQPPVAVPGG	10	61	475.25842073198396	NaN	0	475.27587890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QQPPVAVPGG_	ARID1B|p.K1095Rfs*9|1|0.39|ENSG00000049618|chr6:157181155-157181156|AA/-|frameshift_variant;ARID1B|p.P722Hfs*10|1|0.36|ENSG00000049618|chr6:157084826-157084826|C/-|frameshift_variant;ENSG00000049618|ENST00000636930|ARID1B;nc|ENSG00000049618|Q8NFD5-1|ARID1B;nc|ENSG00000049618|Q8NFD5-2|ARID1B;nc|ENSG00000049618|Q8NFD5|ARID1B	45.9519527083369	0.331194823726099	3				NaN	NaN	0	NaN	5953	4406	10355
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10369	31.316	NaN	2710	30	0	203.12	0.214	+			50433	YACEVTHQGL	10	68	560.7584778568801	1119.50240278056	2	560.7590942382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YACEVTHQGL_	nc|ENSG00000211592|P01834|IGKC	138.06239232086	0.011270695112186733	3				NaN	NaN	0	NaN	5958	4409	10368
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10370	31.32	NaN	1755.3	30	0	757.16	0.032			+	29898	PLPELSGD	8	51	414.21119123304686	826.4078295328937	2	414.2107238769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PLPELSGD_	REV__tr|U7SU24|U7SU24_FUSNUAlanine--tRNAligaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=alaSPE=3SV=1	37.028477286268924	0.6747514403204248	3				NaN	NaN	0	NaN	5959	4409	10368
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10375	31.334	NaN	5464.7	30	0	894.8	0.214				-1	 	0	52	372.2021592641108	742.3897655950216	2	372.2015686035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5961	4412	10374
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10376	31.338	NaN	4574.1	30	0	640.74	0.106	+			4251	ATGDVALLR	9	67	458.2666980759747	914.5188432187495	2	458.2660217285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATGDVALLR_	ENSG00000100605|ENST00000267615|ITPK1	109.47833844074708	0.029530294723441826	3				NaN	NaN	0	NaN	5962	4412	10374
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10377	31.34	NaN	3155	30	0	787.11	0.106	+			49100	VVLENYYK	8	60	514.2770093943246	1026.5394658554492	2	514.2769165039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVLENYYK_	ENSG00000173218|ENST00000355485|VANGL1;nc|ENSG00000173218|Q8TAA9-2|VANGL1;VANGL1|p.L451Cfs*21|1|0.34|ENSG00000173218|chr1:115691153-115691153|C/-|frameshift_variant	68.78682469695295	0.41700713582915416	3				NaN	NaN	0	NaN	5963	4412	10374
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10378	31.341	NaN	2237.7	30	0	259.1	0.106			+	9947	ERALFCMAF	9	61	544.2562792173222	1086.4980055014444	2	544.2564697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ERALFCMAF_	REV__ENSG00000165272|ENST00000297991|AQP3;REV__ENST00000463983.5_1_9:33443205-33447528:-|nuORF;REV__nc|ENSG00000165272|Q92482-2|AQP3	38.80614096846853	0.43426287593479557	3				NaN	NaN	0	NaN	5964	4412	10374
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10379	31.343	NaN	2458	30	0	253.99	0.036				-1	MSSPCHIEM	9	68	546.2196403365346	1090.424727739869	2	546.2200317382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_MSSPC(Carbamidomethyl (C))HIEM_	ENSG00000265681|ENST00000580261|RPL17;ENST00000414070.1_1_1:109535017-109535455:+|nuORF;ENST00000446498.1_1_1:26781156-26781564:-|nuORF;ENST00000452862.1_1_3:197577273-197577471:-|nuORF;ENST00000498256.1_1_8:29489773-29490157:+|nuORF;nc|ENSG00000265681|P18621-2|RPL17;nc|ENSG00000265681|P18621-3|RPL17	35.61828744233558	0.47037581924408073	3				NaN	NaN	0	NaN	5965	4412	10374
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10383	31.357	NaN	13421	30	0	9970.2	0.214				-1	 	0	50	350.20708557058185	698.3996182079637	2	350.20672607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5966	4415	10382
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10384	31.36	NaN	3117.3	30	0	331.23	0.106	+			933	AEILQESRM	9	63	538.7744090911976	NaN	0	538.7737426757812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEILQESRM_	ENSG00000171530|ENST00000380377|TBCA;ENST00000436520.1_1_X:33059580-33059835:+|nuORF;nc|ENSG00000171530|O75347-2|TBCA	65.15724298150197	0.1273232316122292	3				NaN	NaN	0	NaN	5967	4415	10382
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10385	31.362	NaN	3959	30	0	511.47	0.106	+			21403	KMPIIGCKIQ	10	70	602.3332217452667	1202.6518905573332	2	602.33251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_KM(Oxidation (M))PIIGC(Carbamidomethyl (C))KIQ_	SGPL1|p.R86C|1|0.28|ENSG00000166224|chr10:70851205-70851205|C/T|missense_variant	47.657333605630114	0.47858658696240314	3				NaN	NaN	0	NaN	5968	4415	10382
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10386	31.364	NaN	1387.2	30	0	338.27	0.106			+	13480	GLLHSPAL	8	48	404.2406048676407	806.4666568020814	2	404.2398681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GLLHSPAL_	REV__ENST00000485332.7_1_X:221590-221677:-|nuORF	39.021493756699265	0.6623843612266921	3				NaN	NaN	0	NaN	5969	4415	10382
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10387	31.366	NaN	1427.3	30	0	221.94	0.034			+	2236	ALSRRPNR	8	47	485.28985043865447	NaN	0	485.2903747558594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ALSRRPNR_	REV__HDGF|p.F50Sfs*105|7|0.29|ENSG00000143321|chr1:156745312-156745312|A/-|frameshift_variant	38.80614096846853	1.7418937515398478	3				NaN	NaN	0	NaN	5970	4415	10382
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10394	31.382	NaN	12767	30	0	1849.7	0.214	+			37070	SISDKFFQK	9	84	550.2929888552042	1098.5714247772082	2	550.293212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SISDKFFQK_	ENSG00000089472|ENST00000343002|HEPH;HEPH|p.R1086Qfs*4|1|0.29|ENSG00000089472|chrX:66266444-66266445|-/C|frameshift_variant;nc|ENSG00000089472|Q9BQS7-2|HEPH;nc|ENSG00000089472|Q9BQS7-3|HEPH;nc|ENSG00000089472|Q9BQS7-4|HEPH	123.20810148215591	0.019257656778428764	3				NaN	NaN	0	NaN	5974	4418	10393
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10395	31.386	NaN	3032.3	30	0	159.89	0.106	+			42495	TANQIQSLL	9	62	494.27801059736476	986.5414682615295	2	495.2798767089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TANQIQSLL_	ENSG00000103154|ENST00000305202|NECAB2;nc|ENSG00000103154|Q7Z6G3-2|NECAB2	31.529811441608018	0.5085848003137583	3				NaN	NaN	0	NaN	5975	4418	10393
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10396	31.388	NaN	1658.8	30	0	668.88	0.106			+	33981	RSFLANTL	8	55	461.26038776326635	NaN	0	461.2601013183594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RSFLANTL_	REV__ENST00000501122.2_1_11:65191059-65191125:+|nuORF	32.81241826257853	1.7418937515398478	3				NaN	NaN	0	NaN	5976	4418	10393
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10397	31.39	NaN	2038.5	30	0	754.71	0.106			+	50982	YILTPAFLF	9	60	542.80588219591	1083.59721145862	2	542.8058471679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YILTPAFLF_	REV__ENSG00000057252|ENST00000367619|SOAT1;REV__nc|ENSG00000057252|P35610-2|SOAT1;REV__nc|ENSG00000057252|P35610-3|SOAT1	24.20275056022122	0.577060078256802	3				NaN	NaN	0	NaN	5977	4418	10393
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10398	31.391	NaN	1431.5	30	0	182.24	0.106	+			17870	IFWQFDMQ	8	54	557.7535624094219	1113.4925718856437	2	557.7528686523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IFWQFDMQ_	ENSG00000183166|ENST00000395275|CALN1;nc|ENSG00000183166|Q9BXU9-1|CALN1	35.61828744233558	0.6843154725607303	3				NaN	NaN	0	NaN	5978	4418	10393
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10399	31.393	NaN	924.79	30	0	78.099	0.106			+	13586	GLVGQRLL	8	47	428.27363595537247	NaN	0	428.27362060546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GLVGQRLL_	REV__ENSG00000149273|ENST00000531188|RPS3;REV__ENST00000433853.1_1_3:183867695-183868220:+|nuORF;REV__nc|ENSG00000149273|P23396-2|RPS3	35.200714571348534	1.7418937515398478	3				NaN	NaN	0	NaN	5979	4418	10393
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10400	31.395	NaN	1637.7	30	0	252.23	0.035	+			7770	DPDATSLKY	9	59	505.24605404700316	1008.4775551608063	2	505.2471008300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DPDATSLKY_	ENSG00000131778|ENST00000369258|CHD1L;nc|ENSG00000131778|Q86WJ1-2|CHD1L;nc|ENSG00000131778|Q86WJ1-3|CHD1L;nc|ENSG00000131778|Q86WJ1-4|CHD1L;nc|ENSG00000131778|Q86WJ1-5|CHD1L	42.86426827375447	0.38666266728046506	3				NaN	NaN	0	NaN	5980	4418	10393
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10406	31.411	NaN	7130.2	30	0	505.02	0.214	+			35693	SDIQVKEL	8	66	466.25851906863954	930.5024852040791	2	466.2582092285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SDIQVKEL_	ENSG00000117632|ENST00000455785|STMN1;ENST00000465604.1_1_1:26229981-26231212:-|nuORF;nc|ENSG00000117632|P16949-2|STMN1	112.41091882917199	0.2438316832735406	3				NaN	NaN	0	NaN	5983	4421	10405
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10407	31.415	NaN	3506.8	30	0	478.2	0.106	+			12352	GDNKIKAEI	9	64	494.27801059736476	986.5414682615295	2	495.7822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GDNKIKAEI_	ENSG00000169862|ENST00000304623|CTNND2;nc|ENSG00000169862|Q9UQB3-2|CTNND2	40.77816245573522	0.41113185337114944	3				NaN	NaN	0	NaN	5984	4421	10405
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10408	31.417	NaN	4299.2	30	0	585.04	0.106	+			32593	QYGGYKLA	8	58	450.2350219016349	898.4554908700699	2	450.7360534667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QYGGYKLA_	chr13:43059012-43068930|126|14.91|0.21|6.12|+|1|TE_info:L1PB1,L1PB1_dup10508,L1,LINE,donor,-,43056899,43059012|None,DNAJC15|22;L1PB1_dup10508|chr13:43056899-43059152:-|2.941020511291588|0.4940460713329822|2.57|483.0|88|1|anti-sense	50.0245360154114	0.5941082100236891	3				NaN	NaN	0	NaN	5985	4421	10405
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10409	31.418	NaN	5010.4	30	0	2503	0.106			+	-1	EGYIKKMKS	9	41	367.1980812463305	1098.5724143391915	3	367.1976013183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_EGYIKKM(Oxidation (M))KS_	REV__ENSG00000214944|ENST00000513042|ARHGEF28;REV__nc|ENSG00000214944|Q8N1W1-3|ARHGEF28;REV__nc|ENSG00000214944|Q8N1W1-4|ARHGEF28;REV__nc|ENSG00000214944|Q8N1W1-5|ARHGEF28;REV__nc|ENSG00000214944|Q8N1W1-6|ARHGEF28	19.996771675451527	0.6112419832031292	3				NaN	NaN	0	NaN	5986	4421	10405
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10410	31.42	NaN	1139.4	30	0	48.05	0.106				-1	 	0	57	789.7175903320312	NaN	0	789.7175903320312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5987	4421	10405
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10411	31.422	NaN	1619.7	30	0	137.79	0.033	+			35137	SAIAAVIAR	9	50	436.271714807395	870.5288766815901	2	436.2714538574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SAIAAVIAR_	ENSG00000165949|ENST00000612813|IFI27;nc|ENSG00000165949|P40305-1|IFI27;nc|ENSG00000165949|P40305-3|IFI27;nc|ENSG00000165949|P40305-4|IFI27	62.107414245175825	0.1960472003779324	3				NaN	NaN	0	NaN	5988	4421	10405
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10417	31.436	NaN	3261.1	30	0	355.09	0.214	+			45477	TYDKGYQF	8	71	511.23524023814326	1020.4559275430865	2	511.23504638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TYDKGYQF_	ENSG00000139197|ENST00000675855|PEX5;nc|ENSG00000139197|P50542-2|PEX5;nc|ENSG00000139197|P50542-3|PEX5;nc|ENSG00000139197|P50542-4|PEX5	66.42927471994793	0.4381325844043345	3				NaN	NaN	0	NaN	5991	4424	10416
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10418	31.44	NaN	2213.1	30	0	930.75	0.106			+	48643	VTSPLPPL	8	47	412.2503897793285	822.486226625457	2	412.24969482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTSPLPPL_	REV__AOC2|p.Q309Pfs*27|1|0.41|ENSG00000131480|chr17:42845549-42845567|TTCAGTTCTCGCCCCAGGG/-|frameshift_variant	33.51558372728122	0.7005509609380386	3				NaN	NaN	0	NaN	5992	4424	10416
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10419	31.442	NaN	1393	30	0	69.935	0.106	+			24195	LEQNLTVM	8	52	474.24688720703125	NaN	0	474.24688720703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LEQNLTVM_	ENST00000419462.1_1_8:102381210-102381273:+|nuORF;ENST00000552540.5_2_12:57107337-57108468:-|nuORF	60.29395666154354	1.7418937515398478	3				NaN	NaN	0	NaN	5993	4424	10416
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10420	31.444	NaN	2357.2	30	0	183.82	0.106	+			8994	EFSGSAGRRR	10	68	561.7914147165837	1121.5682764999674	2	561.7935791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EFSGSAGRRR_	ENST00000229395.7_1_12:27091398-27091527:+|nuORF	42.86426827375447	0.522752283233888	3				NaN	NaN	0	NaN	5994	4424	10416
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10421	31.446	NaN	921.41	30	0	62.878	0.106			+	27143	MAVAAVRR	8	44	437.25580410366615	NaN	0	437.2563171386719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MAVAAVRR_	REV__DHX37|p.T304M|1|0.11|ENSG00000150990|chr12:124975488-124975488|G/A|missense_variant;REV__ENSG00000150990|ENST00000308736|DHX37	50.0245360154114	1.7418937515398478	3				NaN	NaN	0	NaN	5995	4424	10416
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10422	31.447	NaN	1432.1	30	0	186.61	0.106	+			15254	GTTEAIFTPPE	11	54	581.7861925712859	1161.5578322093718	2	581.7860717773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTTEAIFTPPE_	ENST00000468432.1_1_6:66498672-66498885:+|nuORF	24.519189625965996	0.7326048944360514	3				NaN	NaN	0	NaN	5996	4424	10416
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10423	31.449	NaN	1410.2	30	0	66.108	0.035			+	45137	TVLAHNHQL	9	61	516.7830810546875	NaN	0	516.7830810546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TVLAHNHQL_	REV__ENSG00000124486|ENST00000378308|USP9X;REV__nc|ENSG00000124486|Q93008-3|USP9X;REV__USP9X|p.K1773Nfs*9|1|0.28|ENSG00000124486|chrX:41214693-41214693|A/-|frameshift_variant;REV__USP9X|p.K2377*|1|0.88|ENSG00000124486|chrX:41229318-41229319|-/T|frameshift_variant;REV__USP9X|p.Y1953Mfs*7|1|0.72|ENSG00000124486|chrX:41216419-41216419|T/-|frameshift_variant	34.172542307311794	0.30503706118289736	3				NaN	NaN	0	NaN	5997	4424	10416
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10430	31.465	NaN	2265.8	30	0	370.15	0.214				-1	ELMNMISR	8	58	513.2420209528636	1024.4694889725272	2	513.2422485351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_ELM(Oxidation (M))NM(Oxidation (M))ISR_	ENST00000261396.5_1_1:229584927-229588291:-|nuORF	34.172542307311794	0.6954784234644539	3				NaN	NaN	0	NaN	6001	4427	10429
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10431	31.469	NaN	2159.4	30	0	435.2	0.106				-1	CVHSSLEL	8	55	472.72674071269324	NaN	0	472.7264404296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_C(Carbamidomethyl (C))VHSSLEL_	ENST00000382357.3_1_21:34400138-34400483:+|nuORF	42.47446043378293	1.7418937515398478	3				NaN	NaN	0	NaN	6002	4427	10429
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10432	31.471	NaN	1994.2	30	0	250.87	0.106	+			9538	ELDQVLER	8	60	501.2674211491168	1000.5202893650336	2	501.2667541503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ELDQVLER_	ENSG00000115457|ENST00000233809|IGFBP2;ENST00000436812.1_3_2:217526523-217528824:+|nuORF;ENST00000490362.1_1_2:217526523-217526805:+|nuORF	72.87924865735499	0.38290713436690915	3				NaN	NaN	0	NaN	6003	4427	10429
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10433	31.473	NaN	1685.3	30	0	202.82	0.032	+			19402	KAPAPKAS	8	44	385.2325580470115	768.450563160823	2	385.2323303222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KAPAPKAS_	ENSG00000188846|ENST00000396203|RPL14;REV__ENST00000495036.5_1_7:120690925-120691258:+|nuORF	24.20275056022122	0.7724576178584145	3				NaN	NaN	0	NaN	6004	4427	10429
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10438	31.487	NaN	3083.8	30	0	429.85	0.214	+			10634	EYNTVASKF	9	62	529.7603885562191	1057.5062241792382	2	529.7605590820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EYNTVASKF_	ENSG00000173193|ENST00000474629|PARP14;ENST00000475640.1_1_3:122437249-122439770:+|nuORF;nc|ENSG00000173193|Q460N5-1|PARP14;nc|ENSG00000173193|Q460N5-3|PARP14;nc|ENSG00000173193|Q460N5-4|PARP14;nc|ENSG00000173193|Q460N5-5|PARP14	77.31757898189308	0.1091473830098891	3				NaN	NaN	0	NaN	6006	4430	10437
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10439	31.491	NaN	1942.6	30	0	259.74	0.106			+	21392	KMLQAFADKN	10	62	583.3042340678425	1164.5939152024848	2	583.30322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KMLQAFADKN_	REV__CFAP43|p.D1520Ifs*15|1|0.35|ENSG00000197748|chr10:104133658-104133658|C/-|frameshift_variant;REV__CFAP43|p.V1381Wfs*7|1|0.2|ENSG00000197748|chr10:104143444-104143444|T/-|frameshift_variant;REV__ENSG00000197748|ENST00000357060|CFAP43;REV__nc|ENSG00000197748|Q8NDM7-2|CFAP43	46.45678178249821	0.4896490706773647	3				NaN	NaN	0	NaN	6007	4430	10437
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10440	31.493	NaN	2020.5	30	0	183.09	0.106			+	-1	EKMKLIMEQA	10	55	626.8178953171692	1251.6212377011384	2	626.817626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Oxidation (M)	_EKM(Oxidation (M))KLIM(Oxidation (M))EQA_	REV__ENSG00000179270|ENST00000331664|PCARE	29.170058357718403	0.6416167986984785	3				NaN	NaN	0	NaN	6008	4430	10437
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10441	31.494	NaN	1201.6	30	0	123.36	0.037	+			33795	RQHFLEIIT	9	51	578.8260385694907	1155.6375242057813	2	579.3280639648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RQHFLEIIT_	ENST00000446848.6_1_7:26413249-26413366:+|nuORF	31.529811441608018	0.5085848003137583	3				NaN	NaN	0	NaN	6009	4430	10437
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10448	31.511	NaN	2615.1	30	0	273.11	0.214	+			20083	KEKGTWVQL	9	64	544.8087251612693	1087.6028973893385	2	544.80859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEKGTWVQL_	ENSG00000122026|ENST00000311549|RPL21;ENST00000406094.1_1_6:107090584-107090800:+|nuORF;ENST00000483765.5_1_13:27827977-27830662:+|nuORF	68.84614121027924	0.14577793175421136	3				NaN	NaN	0	NaN	6013	4433	10447
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10449	31.514	NaN	2569.6	30	0	291.27	0.106	+			48550	VTNWDDMEK	9	72	569.2478617127116	1136.481170492223	2	569.2485961914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTNWDDMEK_	ACTB|p.I85T|1|0.1|ENSG00000075624|chr7:5529270-5529270|A/G|missense_variant;ENSG00000075624|ENST00000646664|ACTB;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENST00000436287.1_1_1:224052226-224052508:-|nuORF;ENST00000457622.1_1_6:46172676-46173294:+|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000502306.1_1_5:15450853-15451165:+|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF	45.02220120713402	0.3613509778819777	3				NaN	NaN	0	NaN	6014	4433	10447
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10450	31.516	NaN	2064.3	30	0	278.51	0.106	+			38520	SSCGSVLFH	9	64	497.22662875025145	992.4387045673029	2	497.22625732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SSC(Carbamidomethyl (C))GSVLFH_	ENSG00000136636|ENST00000259154|KCTD3;KCTD3|p.G267Efs*15|1|0.26|ENSG00000136636|chr1:215586664-215586664|G/-|frameshift_variant;KCTD3|p.R348Afs*5|1|0.41|ENSG00000136636|chr1:215602097-215602098|-/C|frameshift_variant;nc|ENSG00000136636|Q9Y597-2|KCTD3	63.30626980617807	0.18605348971131092	3				NaN	NaN	0	NaN	6015	4433	10447
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10451	31.518	NaN	1971.1	30	0	168.73	0.106			+	15276	GTTSHDSQFEL	11	64	611.2731737218777	1220.5317945105553	2	611.273193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTTSHDSQFEL_	REV__CSMD1|p.P1459Qfs*24|1|0.09|ENSG00000183117|chr8:3223840-3223840|G/-|frameshift_variant;REV__CSMD1|p.V815Lfs*13|1|0.05|ENSG00000183117|chr8:3396347-3396348|-/AACAG|frameshift_variant;REV__ENSG00000183117|ENST00000635120|CSMD1;REV__nc|ENSG00000183117|Q96PZ7-2|CSMD1;REV__nc|ENSG00000183117|Q96PZ7-3|CSMD1;REV__nc|ENSG00000183117|Q96PZ7-4|CSMD1	45.02220120713402	0.4892240028381124	3				NaN	NaN	0	NaN	6016	4433	10447
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10452	31.52	NaN	1883	30	0	89.996	0.037				-1	MLLDQVHPPI	10	64	589.8160735659549	1177.6175941987096	2	589.8156127929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_M(Oxidation (M))LLDQVHPPI_	C2CD3|p.I477Nfs*12|2|0.31|ENSG00000168014|chr11:74118318-74118319|-/T|frameshift_variant;C2CD3|p.S563Afs*9|2|0.12|ENSG00000168014|chr11:74114427-74114427|T/-|frameshift_variant;ENSG00000168014|ENST00000334126|C2CD3;ENST00000415191.6_1_11:73824618-73881837:-|nuORF;ENST00000436679.2_1_11:73840908-73844654:-|nuORF;nc|ENSG00000168014|Q4AC94-1|C2CD3;nc|ENSG00000168014|Q4AC94-2|C2CD3;nc|ENSG00000168014|Q4AC94-3|C2CD3;nc|ENSG00000168014|Q4AC94-4|C2CD3	26.69291269510374	0.6618461711292317	3				NaN	NaN	0	NaN	6017	4433	10447
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10457	31.534	NaN	6305.5	30	0	3442.8	0.214			+	33261	RGFSHRPL	8	64	485.27220578941524	968.5298586456305	2	485.2713623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RGFSHRPL_	REV__ENSG00000145864|ENST00000393959|GABRB2;REV__nc|ENSG00000145864|P47870-1|GABRB2	40.77816245573522	0.6514838689002179	3				NaN	NaN	0	NaN	6019	4436	10456
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10458	31.537	NaN	1492.8	30	0	167.36	0.106	+			18717	ITGLLQEFD	9	63	518.2701951385177	NaN	0	518.2699584960938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ITGLLQEFD_	ENSG00000104419|ENST00000323851|NDRG1;ENST00000518010.5_1_8:134269105-134296554:-|nuORF	47.657333605630114	0.2228375344433429	3				NaN	NaN	0	NaN	6020	4436	10456
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10459	31.539	NaN	2966.4	30	0	317.28	0.106	+			45004	TVEHTTNI	8	57	457.73281165925164	913.4510703853033	2	457.732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVEHTTNI_	ENSG00000137177|ENST00000259711|KIF13A;nc|ENSG00000137177|Q9H1H9-2|KIF13A;nc|ENSG00000137177|Q9H1H9-3|KIF13A;nc|ENSG00000137177|Q9H1H9-4|KIF13A	55.50420428727701	0.5462892107279674	3				NaN	NaN	0	NaN	6021	4436	10456
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10460	31.541	NaN	1834.7	30	0	164.36	0.106			+	9602	ELLKKLNEM	9	62	559.3180481996736	1116.6215434661472	2	559.3186645507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ELLKKLNEM_	REV__ENSG00000139132|ENST00000534526|FGD4;REV__ENST00000493087.5_1_12:32755237-32793464:+|nuORF;REV__FGD4|p.K657Nfs*9|1|0.16|ENSG00000139132|chr12:32638720-32638720|A/-|frameshift_variant;REV__FGD4|p.Q681Rfs*31|1|0.19|ENSG00000139132|chr12:32638788-32638788|C/-|frameshift_variant;REV__nc|ENSG00000139132|Q96M96-2|FGD4;REV__nc|ENSG00000139132|Q96M96|FGD4	36.446750945000026	0.4619375763483977	3				NaN	NaN	0	NaN	6022	4436	10456
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10461	31.543	NaN	3956.7	30	0	899.98	0.106	+			20084	KEKGTWVQL	9	40	363.54160569086963	1087.602987672809	3	363.8758239746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEKGTWVQL_	ENSG00000122026|ENST00000311549|RPL21;ENST00000406094.1_1_6:107090584-107090800:+|nuORF;ENST00000483765.5_1_13:27827977-27830662:+|nuORF	40.77816245573522	0.41113185337114944	3				NaN	NaN	0	NaN	6023	4436	10456
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10462	31.545	NaN	1738	30	0	136.65	0.106			+	6519	AYAVVPFL	8	51	440.25053410480297	878.486515276406	2	440.25054931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AYAVVPFL_	REV__ENSG00000116649|ENST00000376957|SRM	43.626045697637714	0.6338121648150432	3				NaN	NaN	0	NaN	6024	4436	10456
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10463	31.547	NaN	1476.8	30	0	378.61	0.035	+			3548	ASTGHLLVPI	10	33	336.5343467729587	NaN	0	336.5343017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASTGHLLVPI_	ENSG00000113555|ENST00000231484|PCDH12;PCDH12|p.E593K|1|0.37|ENSG00000113555|chr5:141956075-141956075|C/T|missense_variant;PCDH12|p.L685Yfs*7|3|0.18|ENSG00000113555|chr5:141955800-141955800|G/-|frameshift_variant	18.324413293986947	0.4201028297492154	3				NaN	NaN	0	NaN	6025	4436	10456
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10472	31.567	NaN	3849.2	30	0	660.84	0.214	+			32116	QSKAVGQDTL	10	70	523.777421774836	1045.5402906164718	2	523.77783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QSKAVGQDTL_	ENSG00000124535|ENST00000380773|WRNIP1;nc|ENSG00000124535|Q96S55-2|WRNIP1;nc|ENSG00000124535|Q96S55-3|WRNIP1	65.46538089061403	0.31613324008013116	3				NaN	NaN	0	NaN	6031	4439	10471
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10473	31.57	NaN	3119.2	30	0	496.83	0.106				-1	QVHRRMNSL	9	80	578.8037613300453	1155.5929697268905	2	578.8041381835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_QVHRRM(Oxidation (M))NSL_	ENSG00000182771|ENST00000327946|GRID1;nc|ENSG00000182771|Q9ULK0-2|GRID1	40.77816245573522	0.41113185337114944	3				NaN	NaN	0	NaN	6032	4439	10471
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10474	31.572	NaN	1688.6	30	0	442.05	0.106			+	28532	NIKNCLPV	8	59	479.26092608740316	NaN	0	479.2613220214844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_NIKNC(Carbamidomethyl (C))LPV_	REV__ENSG00000188738|ENST00000424728|FSIP2;REV__FSIP2|p.D5579Mfs*10|1|0.09|ENSG00000188738|chr2:185806029-185806029|A/-|frameshift_variant;REV__FSIP2|p.K6152Rfs*27|1|0.43|ENSG00000188738|chr2:185807758-185807758|A/-|frameshift_variant;REV__FSIP2|p.K6528Nfs*5|1|0.33|ENSG00000188738|chr2:185808884-185808884|A/-|frameshift_variant;REV__FSIP2|p.V5734Yfs*24|2|0.23|ENSG00000188738|chr2:185806499-185806499|A/-|frameshift_variant;REV__FSIP2|p.V6322*|1|0.42|ENSG00000188738|chr2:185808265-185808265|A/-|frameshift_variant	42.47446043378293	1.7418937515398478	3				NaN	NaN	0	NaN	6033	4439	10471
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10475	31.574	NaN	1436.8	30	0	352.65	0.106	+			26424	LTGDHKNL	8	45	449.243383128864	896.4722133245281	2	449.24273681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LTGDHKNL_	ENSG00000158125|ENST00000379416|XDH	29.14955571784316	0.7342621283720113	3				NaN	NaN	0	NaN	6034	4439	10471
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10476	31.576	NaN	2434.4	30	0	279.82	0.106				-1	 	0	52	432.69814744749914	863.3817419617983	2	433.19903564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	6035	4439	10471
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10477	31.577	NaN	1882.9	30	0	229.44	0.106	+			50788	YENLGRAL	8	56	468.25091122934515	934.4872695254903	2	468.25103759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YENLGRAL_	ENSG00000054654|ENST00000555002|SYNE2;ENST00000557005.1_1_14:64469755-64489638:+|nuORF;nc|ENSG00000054654|Q8WXH0|SYNE2;SYNE2|p.A5240Qfs*5|1|0.07|ENSG00000054654|chr14:64152639-64152639|G/-|frameshift_variant;SYNE2|p.D3074Ffs*8|1|0.07|ENSG00000054654|chr14:64053132-64053133|-/TTTCTTTTTCAAATACTTG|frameshift_variant;SYNE2|p.F2563Ifs*28|1|0.34|ENSG00000054654|chr14:64051593-64051594|-/A|frameshift_variant;SYNE2|p.F2840Lfs*3|1|0.38|ENSG00000054654|chr14:64052427-64052427|T/-|frameshift_variant;SYNE2|p.F4992Lfs*13|1|0.39|ENSG00000054654|chr14:64140067-64140067|T/-|frameshift_variant;SYNE2|p.L5308Ifs*18|1|0.12|ENSG00000054654|chr14:64158750-64158751|GG/-|frameshift_variant;SYNE2|p.M1669Wfs*6|1|0.36|ENSG00000054654|chr14:64017707-64017707|A/-|frameshift_variant;SYNE2|p.N1656Mfs*19|1|0.18|ENSG00000054654|chr14:64017669-64017669|A/-|frameshift_variant;SYNE2|p.S1830Kfs*9|1|0.34|ENSG00000054654|chr14:64021985-64021986|-/A|frameshift_variant;SYNE2|p.S6651Rfs*83|1|0.29|ENSG00000054654|chr14:64220596-64220597|-/G|frameshift_variant	39.252832667884924	0.6609488554722044	3				NaN	NaN	0	NaN	6036	4439	10471
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10478	31.579	NaN	869.7	30	0	73.499	0.033	+			31154	QGIFSVTC	8	43	427.7076416015625	NaN	0	427.7076416015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QGIFSVTC_	DOCK9|p.N1450Mfs*6|1|0.28|ENSG00000088387|chr13:98831683-98831683|T/-|frameshift_variant;DOCK9|p.T1335Yfs*4|2|0.43|ENSG00000088387|chr13:98850057-98850058|-/A|frameshift_variant;ENSG00000088387|ENST00000682017|DOCK9;nc|ENSG00000088387|Q9BZ29-3|DOCK9;nc|ENSG00000088387|Q9BZ29-4|DOCK9;nc|ENSG00000088387|Q9BZ29-5|DOCK9;nc|ENSG00000088387|Q9BZ29-6|DOCK9;nc|ENSG00000088387|Q9BZ29|DOCK9	21.9598887501803	1.7418937515398478	3				NaN	NaN	0	NaN	6037	4439	10471
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10486	31.597	NaN	2103.6	30	0	158.3	0.214			+	33354	RHKQAEEAP	9	63	533.275982525915	1064.5374121186298	2	533.2734985351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RHKQAEEAP_	REV__ENSG00000132405|ENST00000409757|TBC1D14;REV__nc|ENSG00000132405|Q9P2M4-2|TBC1D14;REV__TBC1D14|p.L519*|1|0.21|ENSG00000132405|chr4:7010689-7010689|T/-|frameshift_variant;REV__TBC1D14|p.R544*|1|0.35|ENSG00000132405|chr4:7010757-7010758|-/T|frameshift_variant	45.97224482568171	0.3502073465782774	3				NaN	NaN	0	NaN	6042	4442	10485
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10487	31.601	NaN	3840.3	30	0	373.72	0.106	+			1218	AEQKVEYTL	9	68	540.7827075230848	1079.5508621129695	2	541.2840576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEQKVEYTL_	ENSG00000114867|ENST00000346169|EIF4G1;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;ENST00000460829.5_1_3:184046782-184052693:+|nuORF;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1	54.722347961057174	0.257609425301511	3				NaN	NaN	0	NaN	6043	4442	10485
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10488	31.603	NaN	1318.6	30	0	338.6	0.106	+			16793	HPDAPMSQVY	10	61	572.758629355687	1143.502705778174	2	572.7593994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HPDAPMSQVY_	ENSG00000123562|ENST00000441076|MORF4L2;ENSG00000185787|ENST00000426013|MORF4L1;ENST00000560710.1_1_15:79184565-79186592:+|nuORF;nc|ENSG00000185787|Q9UBU8-3|MORF4L1;nc|ENSG00000185787|Q9UBU8|MORF4L1	51.19269402634007	0.44601001148513897	3				NaN	NaN	0	NaN	6044	4442	10485
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10489	31.605	NaN	1448.9	30	0	136.86	0.106			+	-1	VYLLPNLCC	9	58	547.7716064453125	NaN	0	547.7716064453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_VYLLPNLC(Carbamidomethyl (C))C_	REV__sp|F5HF62|US28_HCMVMEnvelopeproteinUS28OS=Humancytomegalovirus(strainMerlin)OX=295027GN=US28PE=3SV=1	26.79610172149135	0.34227917631780574	3				NaN	NaN	0	NaN	6045	4442	10485
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10490	31.606	NaN	1568.1	30	0	100.11	0.035			+	45747	VADWLALVL	9	61	500.2957581228488	998.5769633124976	2	500.2956237792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VADWLALVL_	REV__ENSG00000173456|ENST00000311413|RNF26	30.503639358989545	0.5181749237905803	3				NaN	NaN	0	NaN	6046	4442	10485
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10494	31.62	NaN	3536.5	30	0	804.74	0.214				-1	 	0	44	382.56121623140723	1144.6618192944218	3	382.5606689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	6047	4445	10493
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10495	31.624	NaN	3096.8	30	0	592.79	0.034				-1	 	0	64	473.7901655874247	945.5657782416495	2	474.29058837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	6048	4445	10493
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10501	31.64	NaN	4062.9	30	0	770.14	0.214	+			46754	VGSMYAGKI	9	59	463.2442201570249	924.4738873808499	2	463.2437438964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VGSMYAGKI_	tr|U7SGJ5|U7SGJ5_FUSNUFilamentoushaemagglutininFhaB/tRNAnucleaseCdiA-likeTPSdomain-containingprotein(Fragment)OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02209PE=4SV=1	44.116797842482775	0.37197099687881774	3				NaN	NaN	0	NaN	6051	4448	10500
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10502	31.644	NaN	1284.9	30	0	822.54	0.106			+	-1	IPLHVICI	8	34	322.1936248402189	NaN	0	322.1938171386719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_IPLHVIC(Carbamidomethyl (C))I_	REV__ENST00000585799.5_1_19:11132109-11172489:+|nuORF	19.359975847455235	1.7418937515398478	3				NaN	NaN	0	NaN	6052	4448	10500
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10503	31.646	NaN	2903.2	30	0	1217.3	0.106				-1	MAPRGYIVA	9	42	345.84787185483157	NaN	0	345.8478088378906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))M(Oxidation (M))APRGYIVA_	ENST00000409894.7_1_2:113332818-113332857:+|nuORF	27.882242232435846	0.3367954786602879	3				NaN	NaN	0	NaN	6053	4448	10500
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10504	31.648	NaN	2500	30	0	336.24	0.106				-1	LESCTLCVQ	9	65	526.7422025770521	NaN	0	526.7423706054688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_LESCTLC(Carbamidomethyl (C))VQ_	ENSG00000180061|ENST00000326652|TMEM150B	49.44154591367651	0.21054156626303966	3				NaN	NaN	0	NaN	6054	4448	10500
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10505	31.649	NaN	1335.4	30	0	182.79	0.106	+			19051	IYGSSHSW	8	52	468.7136473272491	NaN	0	468.71392822265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IYGSSHSW_	DUOX1|p.S186N|1|0.29|ENSG00000137857|chr15:45135535-45135535|G/A|missense_variant;ENSG00000137857|ENST00000389037|DUOX1;ENSG00000140279|ENST00000389039|DUOX2;nc|ENSG00000140279|Q9NRD8|DUOX2	37.028477286268924	1.7418937515398478	3				NaN	NaN	0	NaN	6055	4448	10500
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10506	31.651	NaN	1563.2	30	0	142.13	0.106	+			35767	SEAADSKSL	9	56	454.2233554983478	906.4321580634956	2	454.22259521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SEAADSKSL_	ENSG00000112297|ENST00000633556|CRYBG1;nc|ENSG00000112297|Q9Y4K1-1|CRYBG1	53.351449002276354	0.2690372970092375	3				NaN	NaN	0	NaN	6056	4448	10500
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10507	31.653	NaN	1636.7	30	0	108.86	0.035			+	-1	SCQTFAKR	8	55	499.24635966609924	996.4781663989985	2	499.24603271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_SC(Carbamidomethyl (C))QTFAKR_	REV__ENSG00000215372|ENST00000400156|ZNF705G;REV__nc|ENSG00000214534|A8MWA4|ZNF705EP	37.15910966729921	0.6739408393984688	3				NaN	NaN	0	NaN	6057	4448	10500
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10513	31.667	NaN	8836.3	30	0	833.14	0.214	+			35091	SAFTGQQGY	9	84	479.7173575202523	957.4201621073046	2	479.71710205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAFTGQQGY_	ENSG00000133872|ENST00000256255|SARAF;nc|ENSG00000133872|Q96BY9-2|SARAF	82.7504851949679	0.08565546331141553	3				NaN	NaN	0	NaN	6060	4451	10512
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10514	31.671	NaN	2659.2	30	0	391.14	0.106	+			36009	SEIDTNQNSL	10	62	560.7596414699611	1119.5047300067222	2	560.7592163085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEIDTNQNSL_	DAB2|p.F398Lfs*15|1|0.36|ENSG00000153071|chr5:39382765-39382765|A/-|frameshift_variant;ENSG00000153071|ENST00000320816|DAB2;nc|ENSG00000153071|P98082-3|DAB2	77.53327743719008	0.21577387331637743	3				NaN	NaN	0	NaN	6061	4451	10512
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10515	31.673	NaN	2258.1	30	0	211.52	0.106	+			2477	APLTSIQIRF	10	63	573.3378414654297	1144.6611299976594	2	573.338134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_APLTSIQIRF_	ENSG00000139350|ENST00000266742|NEDD1;nc|ENSG00000139350|Q8NHV4-2|NEDD1;nc|ENSG00000139350|Q8NHV4-3|NEDD1	39.252832667884924	0.5560298534376815	3				NaN	NaN	0	NaN	6062	4451	10512
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10516	31.675	NaN	2788.3	30	0	222.85	0.106	+			50455	YAEMGTRTF	9	64	538.2464663905679	1074.4783798479357	2	538.2447509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YAEMGTRTF_	ENSG00000102595|ENST00000376747|UGGT2;ENST00000467305.1_1_13:96637506-96665674:-|nuORF;nc|ENSG00000102595|Q9NYU1-2|UGGT2;UGGT2|p.N1268Ifs*10|1|0.3|ENSG00000102595|chr13:95859613-95859613|T/-|frameshift_variant	66.96192283764107	0.15557981141143568	3				NaN	NaN	0	NaN	6063	4451	10512
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10517	31.676	NaN	1675.9	30	0	204.76	0.106	+			50833	YETKTALL	8	54	469.7633439719635	937.512135010727	2	469.76318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YETKTALL_	ENSG00000100242|ENST00000689035|SUN2;nc|ENSG00000100242|Q9UH99-2|SUN2;nc|ENSG00000100242|Q9UH99-3|SUN2	51.33545320467046	0.5859736979383976	3				NaN	NaN	0	NaN	6064	4451	10512
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10518	31.678	NaN	1350.1	30	0	158.81	0.106			+	9667	ELTLNRQEL	9	65	558.3071276077715	1114.5997022823428	2	558.307373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ELTLNRQEL_	REV__ENSG00000138639|ENST00000395184|ARHGAP24;REV__nc|ENSG00000138639|Q8N264-2|ARHGAP24;REV__nc|ENSG00000138639|Q8N264-3|ARHGAP24	54.722347961057174	0.257609425301511	3				NaN	NaN	0	NaN	6065	4451	10512
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10519	31.68	NaN	1786.5	30	0	153.06	0.035	+			26821	LVSTLYRY	8	58	507.7828207270637	NaN	0	507.78240966796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LVSTLYRY_	ENST00000380629.6_1_8:26270525-26270594:+|nuORF	53.351449002276354	1.7418937515398478	3				NaN	NaN	0	NaN	6066	4451	10512
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10524	31.694	NaN	7198.3	30	0	4428.6	0.214				-1	 	0	44	350.20708557058185	698.3996182079637	2	350.20672607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	6068	4454	10523
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10525	31.698	NaN	2474	30	0	164.43	0.106	+			31313	QILVSDIDY	9	67	533.275982525915	1064.5374121186298	2	533.77978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QILVSDIDY_	ENSG00000183091|ENST00000397345|NEB;nc|ENSG00000183091|P20929-1|NEB;nc|ENSG00000183091|P20929-3|NEB;nc|ENSG00000183091|P20929-4|NEB;NEB|p.L4198Cfs*51|1|0.35|ENSG00000183091|chr2:151568357-151568357|G/-|frameshift_variant	27.882242232435846	0.5426732730940306	3				NaN	NaN	0	NaN	6069	4454	10523
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10526	31.7	NaN	1913.7	30	0	214.25	0.106	+			47200	VLYQNYKE	8	69	528.7727006823507	NaN	0	528.7730102539062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VLYQNYKE_	ARHGEF26|p.A387T|1|0.35|ENSG00000114790|chr3:154129609-154129609|G/A|missense_variant;ARHGEF26|p.T596Nfs*3|1|0.29|ENSG00000114790|chr3:154194653-154194654|-/A|frameshift_variant;ENSG00000114790|ENST00000465093|ARHGEF26;nc|ENSG00000114790|Q96DR7-3|ARHGEF26;nc|ENSG00000114790|Q96DR7-4|ARHGEF26	35.61828744233558	1.7418937515398478	3				NaN	NaN	0	NaN	6070	4454	10523
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10527	31.702	NaN	1568.7	30	0	213.59	0.106			+	24150	LELNAQFIP	9	62	522.7879835988107	NaN	0	522.787109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LELNAQFIP_	REV__CDK12|p.G1271Dfs*23|2|0.26|ENSG00000167258|chr17:39530648-39530648|C/-|frameshift_variant;REV__CDK12|p.P1267Lfs*27|1|0.33|ENSG00000167258|chr17:39530639-39530639|C/-|frameshift_variant;REV__ENSG00000167258|ENST00000447079|CDK12;REV__nc|ENSG00000167258|Q9NYV4-2|CDK12;REV__nc|ENSG00000167258|Q9NYV4-3|CDK12	40.77816245573522	0.2702456086868081	3				NaN	NaN	0	NaN	6071	4454	10523
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10528	31.704	NaN	1969.1	30	0	785.79	0.038			+	-1	YVICGSFAVF	10	39	388.1927652387374	NaN	0	388.193115234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_YVIC(Carbamidomethyl (C))GSFAVF_	REV__ENSG00000143434|ENST00000368914|SEMA6C;REV__ENST00000464018.5_1_1:151106790-151107739:-|nuORF;REV__nc|ENSG00000143434|Q9H3T2-2|SEMA6C;REV__nc|ENSG00000143434|Q9H3T2-3|SEMA6C;REV__SEMA6C|p.P861Lfs*37|2|0.24|ENSG00000143434|chr1:151132695-151132695|G/-|frameshift_variant	31.529811441608018	0.39664753963064203	3				NaN	NaN	0	NaN	6072	4454	10523
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10534	31.718	NaN	6574.1	30	0	758.16	0.214	+			12666	GEITGEVHM	9	67	486.72678986888997	971.43902680458	2	486.7262878417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEITGEVHM_	ENSG00000136068|ENST00000295956|FLNB;ENST00000481470.5_1_3:58118395-58154450:+|nuORF;nc|ENSG00000136068|O75369-2|FLNB;nc|ENSG00000136068|O75369-3|FLNB;nc|ENSG00000136068|O75369-4|FLNB;nc|ENSG00000136068|O75369-5|FLNB;nc|ENSG00000136068|O75369-6|FLNB;nc|ENSG00000136068|O75369-7|FLNB;nc|ENSG00000136068|O75369-8|FLNB;nc|ENSG00000136068|O75369-9|FLNB	96.19043198914106	0.047412499214244314	3				NaN	NaN	0	NaN	6075	4457	10533
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10535	31.722	NaN	4569.9	30	0	811.76	0.106	+			35471	SATETCYTY	9	66	548.2187754253798	1094.4229979175595	2	548.218994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SATETC(Carbamidomethyl (C))YTY_	ENSG00000132465|ENST00000254801|JCHAIN	124.59426212874841	0.018418509520798258	3				NaN	NaN	0	NaN	6076	4457	10533
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10536	31.724	NaN	3544.9	30	0	273.9	0.106			+	30485	QAFAGPPLADI	11	74	550.2929888552042	1098.5714247772082	2	550.2926635742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QAFAGPPLADI_	REV__ENSG00000173621|ENST00000309602|LRFN4;REV__LRFN4|p.A544Pfs*80|1|0.23|ENSG00000173621|chr11:66859912-66859912|G/-|frameshift_variant;REV__LRFN4|p.G524Vfs*100|1|0.26|ENSG00000173621|chr11:66859853-66859853|G/-|frameshift_variant;REV__LRFN4|p.V623*|1|0.31|ENSG00000173621|chr11:66860149-66860149|G/-|frameshift_variant	44.377184641726394	0.49804979881800077	3				NaN	NaN	0	NaN	6077	4457	10533
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10537	31.725	NaN	3207.2	30	0	979.27	0.106			+	24596	LGQFCRVT	8	60	462.24199297552275	922.4694330178455	2	462.742919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LGQFCRVT_	REV__ENSG00000114638|ENST00000264234|UPK1B	45.9519527083369	0.6193794311207887	3				NaN	NaN	0	NaN	6078	4457	10533
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10538	31.727	NaN	2744.6	30	0	489.78	0.037			+	10364	ETWRVALVL	9	44	362.8822214156542	1085.6248348471627	3	362.8816833496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ETWRVALVL_	REV__ENSG00000186188|ENST00000371481|FFAR4;REV__nc|ENSG00000186188|Q5NUL3-1|FFAR4	26.79610172149135	0.5528238334041078	3				NaN	NaN	0	NaN	6079	4457	10533
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10545	31.745	NaN	5505.9	30	0	692.03	0.214			+	23642	LARFREAP	8	79	480.2744374395388	958.5343219458777	2	480.273681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LARFREAP_	REV__ENST00000379287.3_1_6:13487499-13487736:-|nuORF	51.33545320467046	0.5859736979383976	3				NaN	NaN	0	NaN	6083	4460	10544
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10546	31.749	NaN	4646.7	30	0	842.07	0.106				-1	 	0	62	496.76210539665374	991.5096578601075	2	496.7614440917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	6084	4460	10544
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10547	31.751	NaN	3317.6	30	0	1529.8	0.106			+	13508	GLPLLAPSR	9	55	462.2874188493248	922.5602847654496	2	462.2870788574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GLPLLAPSR_	REV__ENST00000338230.3_2_19:53270898-53289983:-|nuORF;REV__ENST00000598369.1_1_19:53284601-53290004:-|nuORF;REV__ENST00000599893.1_1_19:53284204-53290040:-|nuORF	37.15910966729921	0.4535818937225704	3				NaN	NaN	0	NaN	6085	4460	10544
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10548	31.752	NaN	1860.6	30	0	180.03	0.106	+			50763	YEKLGSTDL	9	54	513.2603756657114	1024.5061983982228	2	513.2592163085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YEKLGSTDL_	ENSG00000105726|ENST00000357324|ATP13A1;ENST00000473243.5_1_19:19762333-19765368:-|nuORF;nc|ENSG00000105726|Q9HD20-2|ATP13A1	52.936696900407355	0.27249468807391813	3				NaN	NaN	0	NaN	6086	4460	10544
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10549	31.754	NaN	3097.5	30	0	512.64	0.106			+	30242	PSTNPLAPPGP	11	61	524.277775882932	1046.540998832664	2	524.2800903320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PSTNPLAPPGP_	REV__ENST00000422163.5_1_3:50296096-50296255:+|nuORF	37.81151784470057	0.5878881669006212	3				NaN	NaN	0	NaN	6087	4460	10544
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10550	31.756	NaN	2455.5	30	0	130.31	0.106	+			49728	VYNKVHITL	9	63	543.8200281281471	NaN	0	543.8204345703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VYNKVHITL_	ENSG00000166228|ENST00000299299|PCBD1;ENST00000493228.1_1_10:72643709-72647885:-|nuORF	49.44154591367651	0.21054156626303966	3				NaN	NaN	0	NaN	6088	4460	10544
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10551	31.758	NaN	1319.2	30	0	76.907	0.033			+	-1	LKCLVVGN	8	47	451.7597901815133	NaN	0	451.7599182128906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_LKC(Carbamidomethyl (C))LVVGN_	REV__ARHGEF6|p.T559Nfs*7|1|0.45|ENSG00000129675|chrX:136680759-136680760|-/T|frameshift_variant;REV__ENSG00000129675|ENST00000250617|ARHGEF6	40.5726180659479	1.7418937515398478	3				NaN	NaN	0	NaN	6089	4460	10544
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10557	31.774	NaN	2457.3	30	0	227.44	0.214	+			9582	ELKDRLQY	8	62	532.7910699030008	1063.5675868728015	2	532.7913818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ELKDRLQY_	nc|ENSG00000090863|Q92896-2|GLG1;nc|ENSG00000090863|Q92896-3|GLG1	63.30626980617807	0.4690498839812213	3				NaN	NaN	0	NaN	6092	4463	10556
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10558	31.778	NaN	1757.6	30	0	445.09	0.106				-1	EWLWTCRM	8	63	570.7500189888494	1139.4854850444988	2	570.750244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_EWLWTCRM(Oxidation (M))_	ENST00000342160.7_2_X:53659481-53661248:-|nuORF	25.450171626174864	0.7628259754767981	3				NaN	NaN	0	NaN	6093	4463	10556
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10559	31.779	NaN	1269	30	0	89.653	0.106			+	36202	SELLLTAK	8	55	437.7658464375247	NaN	0	437.76568603515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SELLLTAK_	REV__CDK5RAP2|p.L1409*|1|0.2|ENSG00000136861|chr9:120415111-120415111|A/-|frameshift_variant;REV__CDK5RAP2|p.P1012Lfs*62|1|0.27|ENSG00000136861|chr9:120443733-120443733|G/-|frameshift_variant;REV__ENSG00000136861|ENST00000349780|CDK5RAP2;REV__ENSG00000165525|ENST00000298310|NEMF;REV__ENST00000479584.1_1_9:123210376-123220777:-|nuORF;REV__ENST00000483412.5_1_9:123170580-123298708:-|nuORF;REV__ENST00000554162.1_1_14:50316416-50319471:-|nuORF;REV__ENST00000557380.5_1_14:50304918-50319471:-|nuORF;REV__nc|ENSG00000136861|Q96SN8-2|CDK5RAP2;REV__nc|ENSG00000136861|Q96SN8-3|CDK5RAP2;REV__nc|ENSG00000136861|Q96SN8-4|CDK5RAP2;REV__nc|ENSG00000165525|O60524-3|NEMF;REV__nc|ENSG00000165525|O60524-4|NEMF;REV__nc|ENSG00000165525|O60524-5|NEMF;REV__NEMF|p.K641Rfs*9|1|0.15|ENSG00000165525|chr14:49802721-49802721|T/-|frameshift_variant;REV__NEMF|p.M879*|1|0.12|ENSG00000165525|chr14:49789558-49789558|T/-|frameshift_variant;REV__NEMF|p.M879Nfs*10|1|0.13|ENSG00000165525|chr14:49789557-49789558|-/T|frameshift_variant	62.107414245175825	1.7418937515398478	3				NaN	NaN	0	NaN	6094	4463	10556
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10560	31.781	NaN	1103	30	0	130.66	0.106			+	10470	EVPKIVPK	8	52	455.2914737814135	NaN	0	455.29217529296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EVPKIVPK_	REV__ENSG00000135205|ENST00000285871|CCDC146;REV__nc|ENSG00000135205|Q8IYE0-2|CCDC146	19.359975847455235	1.7418937515398478	3				NaN	NaN	0	NaN	6095	4463	10556
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10561	31.783	NaN	1885.5	30	0	214.51	0.106	+			8166	EAALDEKN	8	50	445.21710807311473	888.4196632130295	2	445.2166442871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EAALDEKN_	tr|U7SQV9|U7SQV9_FUSNUChromosomepartitionproteinSmcOS=FusobacteriumnucleatumCTI-5OX=1316586GN=smcPE=3SV=1	47.657333605630114	0.6087971902037268	3				NaN	NaN	0	NaN	6096	4463	10556
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10562	31.785	NaN	1180.3	30	0	179.82	0.106				-1	DPVTMMDSIL	10	55	577.258178574667	1152.501804216134	2	577.2586059570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Oxidation (M)	_DPVTM(Oxidation (M))M(Oxidation (M))DSIL_	ENSG00000025156|ENST00000368455|HSF2;ENST00000553115.1_1_12:55516583-55517273:-|nuORF;nc|ENSG00000025156|Q03933-2|HSF2	29.14955571784316	0.6417842315402807	3				NaN	NaN	0	NaN	6097	4463	10556
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10563	31.787	NaN	2647.2	30	0	643.08	0.035	+			1319	AETEPIVKM	9	64	509.2682387007691	1016.5219244683382	2	509.26617431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AETEPIVKM_	ENSG00000104408|ENST00000220849|EIF3E;ENST00000518442.5_1_8:109247181-109261015:-|nuORF	44.377184641726394	0.36891676396732553	3				NaN	NaN	0	NaN	6098	4463	10556
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10569	31.801	NaN	4614.4	30	0	865.92	0.214	+			1137	AEMAQNAVRL	10	76	551.7878822071086	1101.5612114810172	2	551.7882080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEMAQNAVRL_	ENSG00000168036|ENST00000349496|CTNNB1	93.5975768576971	0.11047702954938905	3				NaN	NaN	0	NaN	6101	4466	10568
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10570	31.805	NaN	3013.1	30	0	442.79	0.106	+			34836	RYPDSHQLF	9	63	581.7861925712859	1161.5578322093718	2	581.785888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RYPDSHQLF_	ENSG00000138757|ENST00000359707|G3BP2;nc|ENSG00000138757|Q9UN86-2|G3BP2	23.52269567125451	0.5834155526130771	3				NaN	NaN	0	NaN	6102	4466	10568
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10571	31.807	NaN	2182	30	0	406.84	0.106			+	45049	TVGLDKFTK	9	56	504.7903372704276	1007.5661216076552	2	504.7903747558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVGLDKFTK_	REV__ENSG00000213782|ENST00000358007|DDX47;REV__ENST00000541537.5_1_12:12966301-12977638:+|nuORF;REV__ENST00000542123.5_1_12:12966301-12976268:+|nuORF;REV__ENST00000544032.5_1_12:12966301-12974356:+|nuORF;REV__ENST00000544497.1_1_12:12966301-12967184:+|nuORF;REV__ENST00000545038.5_1_12:12966301-12976268:+|nuORF;REV__nc|ENSG00000213782|Q9H0S4-2|DDX47	37.81151784470057	0.4459294069877048	3				NaN	NaN	0	NaN	6103	4466	10568
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10572	31.808	NaN	2294.3	30	0	236.92	0.106	+			43893	TNFEDRNAF	9	62	557.2521064040079	1112.4896598748157	2	557.2517700195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TNFEDRNAF_	CYFIP1|p.K121Nfs*2|1|0.14|ENSG00000273749|chr15:22944582-22944582|T/-|frameshift_variant;CYFIP2|p.Q484Rfs*7|1|0.08|ENSG00000055163|chr5:157319855-157319856|-/GA|frameshift_variant;ENSG00000055163|ENST00000620254|CYFIP2;ENSG00000273749|ENST00000617928|CYFIP1;nc|ENSG00000055163|Q96F07|CYFIP2	70.8162118820467	0.13725933411854815	3				NaN	NaN	0	NaN	6104	4466	10568
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10573	31.81	NaN	1262.4	30	0	172.73	0.106			+	37525	SLLQCQPQ	8	57	458.7304696484952	915.4463863637905	2	458.72943115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SLLQCQPQ_	REV__nc|ENSG00000167535|P54284-2|CACNB3	33.51558372728122	0.7005509609380386	3				NaN	NaN	0	NaN	6105	4466	10568
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10574	31.812	NaN	2022	30	0	198.25	0.106			+	-1	DTMRQSLTL	9	62	540.7698974609375	NaN	0	540.7698974609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_DTM(Oxidation (M))RQSLTL_	REV__ENST00000341259.6_1_12:111886343-111886586:+|nuORF	49.536043120802724	0.20989033510253738	3				NaN	NaN	0	NaN	6106	4466	10568
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10575	31.814	NaN	1168.9	30	0	68.906	0.035	+			24070	LEKCAMTAL	9	60	518.7624128294547	NaN	0	518.76220703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_LEKC(Carbamidomethyl (C))AMTAL_	ENSG00000135624|ENST00000258091|CCT7;nc|ENSG00000135624|Q99832-3|CCT7;nc|ENSG00000135624|Q99832-4|CCT7	56.72105179125745	0.16330365735109603	3				NaN	NaN	0	NaN	6107	4466	10568
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10579	31.828	NaN	2374.5	30	0	224.35	0.214			+	37765	SLVRMINTY	9	59	548.7931946997971	1095.5718364663942	2	548.7942504882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLVRMINTY_	REV__ENSG00000143627|ENST00000342741|PKLR;REV__nc|ENSG00000143627|P30613-2|PKLR	34.172542307311794	0.4838870758800184	3				NaN	NaN	0	NaN	6108	4469	10578
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10580	31.831	NaN	1587.9	30	0	219.72	0.106			+	27073	MAHCLLRGE	9	57	515.2502363484949	NaN	0	515.2501220703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MAHCLLRGE_	REV__ENSG00000172915|ENST00000379939|NBEA;REV__NBEA|p.V2250Lfs*10|1|0.36|ENSG00000172915|chr13:35550967-35550967|A/-|frameshift_variant;REV__nc|ENSG00000172915|Q8NFP9|NBEA	37.81151784470057	0.28666463014928195	3				NaN	NaN	0	NaN	6109	4469	10578
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10581	31.833	NaN	2455.5	30	0	1079.1	0.035			+	25238	LNFQKLIK	8	54	502.3190327222975	1002.623512511395	2	502.3185729980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LNFQKLIK_	REV__tr|U7SL85|U7SL85_FUSNUABCtransporterdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02014PE=4SV=1	30.503639358989545	0.7238069182250283	3				NaN	NaN	0	NaN	6110	4469	10578
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10586	31.847	NaN	3392.9	30	0	2021.9	0.214	+			32416	QVGAKIFLK	9	36	335.2149659194942	1002.6230683586826	3	335.2150573730469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QVGAKIFLK_	ENST00000580713.1_1_17:18212093-18218098:-|nuORF	24.519189625965996	0.574102787014149	3				NaN	NaN	0	NaN	6112	4472	10585
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10587	31.851	NaN	1750.7	30	0	152.2	0.035			+	24305	LFGIDAFTV	9	56	491.7643075183012	981.5140621034025	2	491.7645263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LFGIDAFTV_	REV__ENSG00000198674|ENST00000307002|OR10G6	55.50420428727701	0.2510918378945873	3				NaN	NaN	0	NaN	6113	4472	10585
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10592	31.865	NaN	4258	30	0	267.46	0.214			+	50202	WLTQLAQL	8	66	486.7771265115303	NaN	0	486.7767028808594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WLTQLAQL_	REV__ENSG00000187609|ENST00000340951|EXD3;REV__EXD3|p.S120Qfs*52|2|0.34|ENSG00000187609|chr9:137373009-137373010|-/G|frameshift_variant;REV__nc|ENSG00000187609|Q8N9H8-4|EXD3	58.78195531508484	1.7418937515398478	3				NaN	NaN	0	NaN	6115	4475	10591
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10593	31.869	NaN	2213.1	30	0	364.64	0.106			+	19545	KCGKLKAI	8	49	430.7731266319998	859.5317003307996	2	430.77276611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KCGKLKAI_	REV__ENSG00000106853|ENST00000407693|PTGR1;REV__nc|ENSG00000106853|Q14914-2|PTGR1	19.359975847455235	0.7988239741663654	3				NaN	NaN	0	NaN	6116	4475	10591
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10594	31.871	NaN	1160.8	30	0	160.12	0.106			+	-1	VMRKGDEEL	9	44	546.7698604900625	1091.5251680469248	2	546.770263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_VM(Oxidation (M))RKGDEEL_	REV__ENSG00000214860|ENST00000399134|EVPLL	29.14955571784316	0.5308295550522326	3				NaN	NaN	0	NaN	6117	4475	10591
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10595	31.872	NaN	1406.2	30	0	237.72	0.106			+	27756	MQVVDGEGATY	11	53	585.2609658160038	1168.5073786988075	2	585.2587280273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MQVVDGEGATY_	REV__sp|F5HG98|UL38_HCMVMApoptosisinhibitorUL38OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL38PE=1SV=1;REV__sp|P16779|UL38_HCMVAApoptosisinhibitorUL38OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL38PE=3SV=1	38.753607047826485	0.5749975102143227	3				NaN	NaN	0	NaN	6118	4475	10591
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10596	31.874	NaN	889.87	30	0	52.87	0.106			+	25008	LLGAAAWVA	9	43	436.25360107421875	NaN	0	436.25360107421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LLGAAAWVA_	REV__ENSG00000180929|ENST00000322241|GPR62	49.21078951299608	0.21213183292994464	3				NaN	NaN	0	NaN	6119	4475	10591
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10597	31.876	NaN	1704.3	30	0	135.08	0.106			+	18860	IVFEGNKMGIA	11	71	589.8160735659549	1177.6175941987096	2	589.8156127929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IVFEGNKMGIA_	REV__EML6|p.R1767Efs*19|1|0.37|ENSG00000214595|chr2:54964127-54964127|C/-|frameshift_variant;REV__ENSG00000214595|ENST00000356458|EML6;REV__ENST00000490828.5_1_2:55184973-55193987:+|nuORF;REV__nc|ENSG00000214595|Q6ZMW3-2|EML6	29.170058357718403	0.683821074385409	3				NaN	NaN	0	NaN	6120	4475	10591
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10598	31.878	NaN	1289.7	30	0	179.91	0.035			+	7226	DAKLAAKYK	9	51	504.29817730088496	NaN	0	504.298095703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DAKLAAKYK_	REV__ENSG00000131368|ENST00000253686|MRPS25;REV__ENST00000447299.1_1_3:15093950-15094835:-|nuORF	35.61828744233558	0.29773779453147337	3				NaN	NaN	0	NaN	6121	4475	10591
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10605	31.894	NaN	2028.6	30	0	159	0.214	+			47269	VMSQALKATF	10	61	556.2949999149705	1110.575446896741	2	556.2951049804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_VM(Oxidation (M))SQALKATF_	ENSG00000157557|ENST00000360938|ETS2	53.08895987439943	0.42869529153390606	3				NaN	NaN	0	NaN	6125	4478	10604
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10606	31.898	NaN	3204.7	30	0	585	0.106	+			28180	NAPQLAEPY	9	61	501.748786995875	1001.48302105855	2	501.7476501464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NAPQLAEPY_	ENSG00000139880|ENST00000487137|CDH24;nc|ENSG00000139880|Q86UP0-3|CDH24;nc|ENSG00000139880|Q86UP0|CDH24	56.72105179125745	0.24094814563026265	3				NaN	NaN	0	NaN	6126	4478	10604
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10607	31.9	NaN	1768.3	30	0	188.72	0.106			+	48795	VTYYLLAAR	9	60	535.3064147256472	1068.5982765180943	2	535.3067626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTYYLLAAR_	REV__ENSG00000164542|ENST00000440378|MATCAP2;REV__nc|ENSG00000164542|Q8NCT3-2|MATCAP2;REV__nc|ENSG00000164542|Q8NCT3-3|MATCAP2;REV__nc|ENSG00000164542|Q8NCT3-5|MATCAP2;REV__nc|ENSG00000164542|Q8NCT3|MATCAP2	31.954861631926434	0.5046124803899898	3				NaN	NaN	0	NaN	6127	4478	10604
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10608	31.902	NaN	1684.1	30	0	165.2	0.106	+			29666	PGPIWLSF	8	50	458.7477272851739	NaN	0	458.74810791015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PGPIWLSF_	ENST00000297875.6_1_X:37985921-37986104:+|nuORF	44.53106598305862	1.7418937515398478	3				NaN	NaN	0	NaN	6128	4478	10604
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10609	31.903	NaN	2049.6	30	0	305.79	0.035	+			32365	QVAEIVSKY	9	62	518.7875170474639	1035.5604811617277	2	518.7874145507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QVAEIVSKY_	ENSG00000138448|ENST00000261023|ITGAV;ITGAV|p.G401Efs*13|1|0.4|ENSG00000138448|chr2:186646721-186646721|A/-|frameshift_variant;ITGAV|p.G561Dfs*2|4|0.23|ENSG00000138448|chr2:186656358-186656358|G/-|frameshift_variant;ITGAV|p.V806Hfs*11|1|0.07|ENSG00000138448|chr2:186667758-186667759|-/CATTTTCAAAA|frameshift_variant;nc|ENSG00000138448|P06756-2|ITGAV;nc|ENSG00000138448|P06756-3|ITGAV	53.08895987439943	0.27122541748218487	3				NaN	NaN	0	NaN	6129	4478	10604
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10616	31.92	NaN	4319.1	30	0	781.79	0.214	+			12974	GETKMVETAL	10	70	539.7769097361341	1077.5392665390682	2	539.7772216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GETKMVETAL_	ENSG00000132465|ENST00000254801|JCHAIN	94.4091291819064	0.10583072883246657	3				NaN	NaN	0	NaN	6133	4481	10615
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10617	31.923	NaN	4472.6	30	0	717.61	0.106	+			26438	LTGPVMPVR	9	67	485.28162210771933	968.5486912822387	2	485.2815246582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LTGPVMPVR_	ENSG00000167526|ENST00000311528|RPL13;ENST00000399461.8_1_16:89627605-89629447:+|nuORF;ENST00000484610.5_1_16:89627907-89629447:+|nuORF;ENST00000570149.1_1_16:89628679-89629447:+|nuORF;nc|ENSG00000167526|P26373-2|RPL13	66.42927471994793	0.16001998865088202	3				NaN	NaN	0	NaN	6134	4481	10615
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10618	31.925	NaN	1608.2	30	0	142.4	0.106	+			9570	ELGLAKEAI	9	55	472.2763788741949	NaN	0	472.2761535644531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ELGLAKEAI_	ENST00000294811.2_1_1:209956812-209957735:-|nuORF	47.95952297671804	0.22075498469600283	3				NaN	NaN	0	NaN	6135	4481	10615
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10619	31.927	NaN	1124.6	30	0	113.33	0.106	+			24148	LELIGAIN	8	42	421.75272704984366	841.4909011664873	2	421.75201416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LELIGAIN_	ENSG00000162601|ENST00000472487|MYSM1;ENST00000401044.7_1_1:59134235-59156019:-|nuORF;ENST00000481973.1_1_1:59142496-59147488:-|nuORF;nc|ENSG00000162601|Q5VVJ2-2|MYSM1	38.80614096846853	0.6637206697844082	3				NaN	NaN	0	NaN	6136	4481	10615
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10620	31.929	NaN	878.82	30	0	130.62	0.035	+			25236	LNFKKGWM	8	50	512.2745361328125	NaN	0	512.2745361328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LNFKKGWM_	ENSG00000100106|ENST00000644935|TRIOBP;nc|ENSG00000100106|Q9H2D6-2|TRIOBP;nc|ENSG00000100106|Q9H2D6-3|TRIOBP;nc|ENSG00000100106|Q9H2D6-5|TRIOBP;nc|ENSG00000100106|Q9H2D6-6|TRIOBP;nc|ENSG00000100106|Q9H2D6-7|TRIOBP	25.450171626174864	1.7418937515398478	3				NaN	NaN	0	NaN	6137	4481	10615
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10628	31.947	NaN	3182.4	30	0	265.1	0.214	+			50639	YEDATKITV	9	67	520.269304876898	1038.524056820596	2	520.2689208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YEDATKITV_	ENSG00000132383|ENST00000254719|RPA1	68.84614121027924	0.14577793175421136	3				NaN	NaN	0	NaN	6142	4484	10627
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10629	31.95	NaN	1686.1	30	0	158.27	0.106	+			25302	LPAKDIQTNVY	11	69	631.3432895581612	1260.6720261831224	2	631.3426513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LPAKDIQTNVY_	ENSG00000099341|ENST00000215071|PSMD8;ENST00000592001.5_1_19:38865430-38871817:+|nuORF	33.921630207806714	0.6339809607503234	3				NaN	NaN	0	NaN	6143	4484	10627
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10630	31.952	NaN	1262	30	0	89.651	0.106			+	-1	CLGLHFLPA	9	54	514.2750965058198	1026.5356400784394	2	514.2747802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_C(Carbamidomethyl (C))LGLHFLPA_	REV__ENST00000480308.5_1_1:161646774-161647023:+|nuORF	39.021493756699265	0.43173687394350213	3				NaN	NaN	0	NaN	6144	4484	10627
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10631	31.954	NaN	1348.5	30	0	253.51	0.035	+			15360	GTVSPLFQK	9	64	488.7770352658062	975.5395175984124	2	488.7757568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTVSPLFQK_	ENSG00000166986|ENST00000262027|MARS1;ENST00000537638.6_1_12:57905855-57911076:+|nuORF	37.81151784470057	0.4459294069877048	3				NaN	NaN	0	NaN	6145	4484	10627
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10638	31.97	NaN	7330.1	30	0	992.86	0.214	+			18234	INQKLQQI	8	66	492.79598998760065	983.5774270420013	2	492.7953796386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_INQKLQQI_	ZNF354A|p.K188Nfs*75|1|0.07|ENSG00000169131|chr5:178713314-178713314|T/-|frameshift_variant	85.35947970620816	0.2915182781752196	3				NaN	NaN	0	NaN	6149	4487	10637
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10639	31.974	NaN	2232.4	30	0	422.77	0.106	+			25953	LSIGDPGILA	10	56	478.2767553356493	954.5389577380986	2	478.2763977050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSIGDPGILA_	ENST00000343605.4_1_22:31032071-31032353:+|nuORF	35.61828744233558	0.588957954432594	3				NaN	NaN	0	NaN	6150	4487	10637
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10640	31.976	NaN	4048.3	30	0	323.38	0.106	+			26853	LVVRYTPR	8	67	502.30521866665816	1002.5958844001163	2	502.3046569824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LVVRYTPR_	ENSG00000104863|ENST00000221459|LIN7B;ENST00000469137.5_1_19:49617849-49621627:+|nuORF;ENST00000474252.1_1_19:49618516-49621276:+|nuORF;nc|ENSG00000104863|Q9HAP6-2|LIN7B	39.252832667884924	0.6609488554722044	3				NaN	NaN	0	NaN	6151	4487	10637
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10641	31.978	NaN	4952.3	30	0	354.29	0.106	+			45622	TYQEVAQKF	9	70	557.2829792792811	1112.5514056253621	2	557.2832641601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TYQEVAQKF_	ENSG00000093072|ENST00000399837|ADA2;nc|ENSG00000093072|Q9NZK5-2|ADA2	120.27252224102466	0.02103478360410217	3				NaN	NaN	0	NaN	6152	4487	10637
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10642	31.98	NaN	2004.6	30	0	229.99	0.106	+			24122	LEKSMEPSL	9	59	517.265546024313	1032.516539115426	2	517.2658081054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LEKSMEPSL_	ENSG00000123338|ENST00000293373|NCKAP1L;ENST00000547500.1_1_12:54891564-54894436:+|nuORF;NCKAP1L|p.L134Sfs*11|1|0.04|ENSG00000123338|chr12:54508424-54508425|-/AGTGCTCAATATATTCCGAGTGAATCTAT|frameshift_variant	71.87747018426188	0.13267044672804276	3				NaN	NaN	0	NaN	6153	4487	10637
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10643	31.981	NaN	1553.9	30	0	249.02	0.106	+			25615	LQNRLPLLPG	10	40	374.2329649148647	NaN	0	374.2330627441406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LQNRLPLLPG_	ENST00000291574.8_1_21:45518287-45518356:+|nuORF	27.047317107675042	0.41136583337917604	3				NaN	NaN	0	NaN	6154	4487	10637
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10644	31.983	NaN	1403.5	30	0	158.04	0.037			+	-1	SKCVNILMR	9	62	568.8007202148438	NaN	0	568.8007202148438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C),Oxidation (M)	_SKC(Carbamidomethyl (C))VNILM(Oxidation (M))R_	REV__ENST00000602169.1_1_19:47109218-47109290:+|nuORF	27.882242232435846	0.3367954786602879	3				NaN	NaN	0	NaN	6155	4487	10637
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10650	31.999	NaN	1885.4	30	0	277.56	0.214	+			49994	WANVGKSL	8	56	437.74312046427997	873.47168799536	2	437.7424011230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WANVGKSL_	ENSG00000109452|ENST00000262992|INPP4B;ENST00000512630.5_1_4:143007384-143094853:-|nuORF	62.107414245175825	0.4809183816468817	3				NaN	NaN	0	NaN	6158	4490	10649
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10651	32.003	NaN	2175.9	30	0	160.52	0.106	+			10776	FAGPCKVI	8	54	446.24176138449013	890.4689698357803	2	446.24090576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_FAGPC(Carbamidomethyl (C))KVI_	ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC;PRKDC|p.D2437Wfs*3|1|0.11|ENSG00000253729|chr8:47840161-47840162|-/CA|frameshift_variant;PRKDC|p.E1557Sfs*16|1|0.16|ENSG00000253729|chr8:47886051-47886051|C/-|frameshift_variant;PRKDC|p.G1227Vfs*50|2|0.31|ENSG00000253729|chr8:47893306-47893306|C/-|frameshift_variant;PRKDC|p.K3681Nfs*6|1|0.32|ENSG00000253729|chr8:47785174-47785177|TTCT/-|frameshift_variant;PRKDC|p.M3670*|1|0.5|ENSG00000253729|chr8:47785212-47785212|T/-|frameshift_variant;PRKDC|p.M3846Cfs*12|1|0.13|ENSG00000253729|chr8:47779047-47779047|T/-|frameshift_variant;PRKDC|p.M4020Cfs*2|1|0.31|ENSG00000253729|chr8:47776968-47776968|T/-|frameshift_variant;PRKDC|p.N3605Kfs*3|1|0.22|ENSG00000253729|chr8:47788993-47788994|-/T|frameshift_variant;PRKDC|p.N4037Ifs*15|1|0.17|ENSG00000253729|chr8:47776916-47776916|T/-|frameshift_variant;PRKDC|p.R2704Gfs*13|2|0.34|ENSG00000253729|chr8:47834238-47834238|T/-|frameshift_variant;PRKDC|p.S3402Ifs*16|1|0.04|ENSG00000253729|chr8:47799302-47799303|-/AAACCGTGAGTTAGAGGAGGTAA|frameshift_variant;PRKDC|p.S4099Qfs*6|1|0.25|ENSG00000253729|chr8:47774265-47774265|A/-|frameshift_variant;PRKDC|p.T3268Pfs*7|1|0.5|ENSG00000253729|chr8:47803426-47803426|T/-|frameshift_variant;PRKDC|p.W3401Cfs*4|1|0.01|ENSG00000253729|chr8:47799304-47799305|-/AATGAATA|frameshift_variant	42.47446043378293	0.6409579893742323	3				NaN	NaN	0	NaN	6159	4490	10649
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10652	32.005	NaN	1648	30	0	179.76	0.106	+			41492	SVPEAQSAL	9	50	451.23530446821707	900.4560560032342	2	451.2347717285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVPEAQSAL_	ENSG00000086666|ENST00000261749|ZFAND6;ENST00000561017.1_1_15:80414070-80415156:+|nuORF;nc|ENSG00000086666|Q6FIF0-2|ZFAND6	62.107414245175825	0.1960472003779324	3				NaN	NaN	0	NaN	6160	4490	10649
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10653	32.006	NaN	1806.4	30	0	190.59	0.106			+	40865	SVFERASI	8	62	454.7452162813546	NaN	0	454.74493408203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVFERASI_	REV__ENSG00000239474|ENST00000284669|KLHL41;REV__KLHL41|p.L433Tfs*9|1|0.38|ENSG00000239474|chr2:169514874-169514875|-/A|frameshift_variant;REV__KLHL41|p.R586Qfs*9|1|0.09|ENSG00000239474|chr2:169525631-169525632|-/AAATGTG|frameshift_variant;REV__KLHL41|p.Y231Ifs*3|1|0.42|ENSG00000239474|chr2:169510463-169510464|-/A|frameshift_variant;REV__nc|ENSG00000239474|O60662-2|KLHL41	34.172542307311794	1.7418937515398478	3				NaN	NaN	0	NaN	6161	4490	10649
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10654	32.008	NaN	2953.8	30	0	863.81	0.106				-1	SQPGLWLPSI	10	46	380.54180734400785	1138.6035926322236	3	380.5414123535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SQPGLWLPSI_	ENST00000553804.5_1_12:56078655-56078835:-|nuORF	22.579656572578934	0.6954366826851017	3				NaN	NaN	0	NaN	6162	4490	10649
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10655	32.01	NaN	1464.1	30	0	274.5	0.106				-1	MQSQASSCPW	10	60	591.2383224377729	NaN	0	591.238037109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_MQSQASSC(Carbamidomethyl (C))PW_	ENST00000270645.7_1_19:50046533-50046872:+|nuORF	21.68575002086885	0.4201028297492154	3				NaN	NaN	0	NaN	6163	4490	10649
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10656	32.012	NaN	2423.3	30	0	820.77	0.035			+	43697	TKIQLLAGSI	10	51	522.3277496232737	NaN	0	522.326416015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TKIQLLAGSI_	REV__ENSG00000146411|ENST00000275230|SLC2A12	50.033510581677724	0.305390621352984	3				NaN	NaN	0	NaN	6164	4490	10649
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10663	32.03	NaN	7864.4	30	0	2471.2	0.214	+			15147	GTSELLLAK	9	62	466.2767581953569	930.5389634575138	2	466.2764892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTSELLLAK_	ASAP1|p.P792Lfs*20|1|0.1|ENSG00000153317|chr8:130112120-130112120|G/-|frameshift_variant;ASAP2|p.H548Qfs*57|1|0.14|ENSG00000151693|chr2:9374842-9374842|C/-|frameshift_variant;ASAP2|p.L787Afs*16|1|0.31|ENSG00000151693|chr2:9388513-9388514|-/C|frameshift_variant;ENSG00000151693|ENST00000281419|ASAP2;ENSG00000153317|ENST00000518721|ASAP1;nc|ENSG00000151693|O43150-2|ASAP2;nc|ENSG00000153317|Q9ULH1-2|ASAP1	82.24051045832904	0.08786059719216216	3				NaN	NaN	0	NaN	6168	4493	10662
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10664	32.033	NaN	4222.3	30	0	352.72	0.106	+			10660	EYQLSTLEM	9	76	557.259606377642	1112.5046598220838	2	557.26025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EYQLSTLEM_	CON__Q9D312	74.25504064058377	0.12238981753128622	3				NaN	NaN	0	NaN	6169	4493	10662
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10665	32.035	NaN	2578.5	30	0	444.14	0.106				-1	SAINSHLL	8	52	448.745829810479	895.477106687758	2	448.7456359863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SAINSHLL_	ENSG00000135249|ENST00000257700|RINT1;REV__ENSG00000116906|ENST00000366647|GNPAT;REV__GNPAT|p.A437V|1|0.31|ENSG00000116906|chr1:231270788-231270788|C/T|missense_variant;REV__nc|ENSG00000116906|O15228-2|GNPAT;RINT1|p.L239Nfs*46|1|0.03|ENSG00000135249|chr7:105547207-105547208|-/AAATATG|frameshift_variant;RINT1|p.L275*|1|0.08|ENSG00000135249|chr7:105547315-105547315|T/-|frameshift_variant;RINT1|p.P247Lfs*8|2|0.23|ENSG00000135249|chr7:105547230-105547230|C/-|frameshift_variant	74.25504064058377	0.37144338840759816	3				NaN	NaN	0	NaN	6170	4493	10662
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10666	32.037	NaN	1753.6	30	0	509.64	0.106				-1	 	0	39	350.20708557058185	698.3996182079637	2	350.2069396972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	6171	4493	10662
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10667	32.039	NaN	2354.1	30	0	159.47	0.106	+			3777	ATAEVLNIGK	10	64	508.29248254914387	1014.5704121650878	2	508.2926940917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATAEVLNIGK_	ENSG00000128050|ENST00000512576|PAICS;ENST00000510584.1_1_4:57302478-57308067:+|nuORF;nc|ENSG00000128050|P22234-2|PAICS	83.6470233535746	0.16744595502813267	3				NaN	NaN	0	NaN	6172	4493	10662
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10668	32.041	NaN	2117.7	30	0	665.69	0.106	+			27884	MTLLTYELR	9	66	570.3090122875789	1138.6034716419576	2	570.308837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MTLLTYELR_	ENSG00000119121|ENST00000360774|TRPM6;nc|ENSG00000119121|Q9BX84-2|TRPM6;nc|ENSG00000119121|Q9BX84-3|TRPM6;nc|ENSG00000119121|Q9BX84-4|TRPM6;TRPM6|p.E1956Kfs*25|1|0.33|ENSG00000119121|chr9:74728308-74728308|C/-|frameshift_variant	51.33545320467046	0.2872990594074956	3				NaN	NaN	0	NaN	6173	4493	10662
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10669	32.042	NaN	2454.8	30	0	329.4	0.033	+			16661	HIIAGAGEL	9	53	440.7482063328376	879.4818597324752	2	441.24951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HIIAGAGEL_	ENSG00000167658|ENST00000309311|EEF2	50.0245360154114	0.3026755932229825	3				NaN	NaN	0	NaN	6174	4493	10662
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10674	32.057	NaN	1511.6	30	0	178.93	0.214				-1	 	0	48	430.7731266319998	859.5317003307996	2	430.7724914550781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	6176	4496	10673
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10675	32.06	NaN	1566.8	30	0	490.99	0.106	+			49893	VYTSKSDVW	9	56	542.7699448112754	1083.5253366893508	2	542.7694091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYTSKSDVW_	ENSG00000153208|ENST00000295408|MERTK;ENSG00000167601|ENST00000301178|AXL;nc|ENSG00000167601|P30530-2|AXL	39.252832667884924	0.4290233611298554	3				NaN	NaN	0	NaN	6177	4496	10673
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10676	32.062	NaN	1743.6	30	0	203.03	0.106	+			26211	LSSFAEKHY	9	55	541.2698707684511	NaN	0	541.2689819335938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSSFAEKHY_	ENSG00000185920|ENST00000331920|PTCH1;ENST00000375290.6_3_9:98215758-98232201:-|nuORF;nc|ENSG00000185920|Q13635-2|PTCH1;nc|ENSG00000185920|Q13635-3|PTCH1;nc|ENSG00000185920|Q13635-4|PTCH1;PTCH1|p.R1308Efs*64|1|0.24|ENSG00000185920|chr9:95447335-95447335|G/-|frameshift_variant;PTCH1|p.S1203Afs*52|2|0.47|ENSG00000185920|chr9:95449267-95449267|G/-|frameshift_variant;PTCH1|p.Y1316Tfs*56|3|0.29|ENSG00000185920|chr9:95447311-95447311|G/-|frameshift_variant	36.31764250033197	0.294206896222586	3				NaN	NaN	0	NaN	6178	4496	10673
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10677	32.064	NaN	1320.1	30	0	367.82	0.106				-1	VMDRAGLVCWL	11	58	652.8272867337014	NaN	0	652.8276977539062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))VMDRAGLVCWL_	ENST00000418258.5_1_9:98268847-98269307:-|nuORF	39.252832667884924	0.39048276625972167	3				NaN	NaN	0	NaN	6179	4496	10673
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10678	32.066	NaN	1906.5	30	0	610.19	0.106	+			28507	NHPIISLK	8	51	461.2800512987708	920.5455496643416	2	461.7802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NHPIISLK_	ENST00000510885.2_1_4:57461090-57461750:+|nuORF	25.450171626174864	0.7628259754767981	3				NaN	NaN	0	NaN	6180	4496	10673
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10679	32.068	NaN	1259.1	30	0	129.05	0.04			+	1422	AEWYKELDSNI	11	57	684.32763671875	NaN	0	684.32763671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEWYKELDSNI_	REV__nc|ENSG00000145014|Q2T9K0-7|TMEM44	37.50817390946774	0.39825797133360086	3				NaN	NaN	0	NaN	6181	4496	10673
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10684	32.082	NaN	2569	30	0	635.82	0.214				-1	 	0	65	581.2892399189791	580.281963452379	1	581.2904052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	6183	4499	10683
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10685	32.085	NaN	1600.4	30	0	131.46	0.035				-1	 	0	66	496.76210539665374	991.5096578601075	2	496.7613220214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	6184	4499	10683
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10693	32.104	NaN	1440.4	30	0	165.16	0.214			+	-1	QGAKGAAM	8	39	375.1848277013441	748.3551024694882	2	375.1842956542969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_QGAKGAAM(Oxidation (M))_	REV__ENSG00000063169|ENST00000594866|BICRA;REV__nc|ENSG00000063169|Q9NZM4-2|BICRA	14.664097394203935	0.7913966407026132	3				NaN	NaN	0	NaN	6189	4502	10692
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10694	32.107	NaN	2361.5	30	0	302.66	0.106	+			17601	IEFSDKESV	9	58	527.2582696189133	1052.5019863046266	2	527.2583618164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IEFSDKESV_	ENSG00000100836|ENST00000216727|PABPN1;ENSG00000258643|ENST00000678502|BCL2L2-PABPN1;ENST00000391782.2_1_X:70640109-70640352:-|nuORF;nc|ENSG00000100836|Q86U42-2|PABPN1;nc|ENSG00000258643|Q92843-2|BCL2L2	60.11826168202944	0.21262886028301267	3				NaN	NaN	0	NaN	6190	4502	10692
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10695	32.109	NaN	1771.6	30	0	320.87	0.106			+	-1	LNQQMEMH	8	57	523.7255255101259	NaN	0	523.7261352539062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_LNQQMEM(Oxidation (M))H_	REV__ENSG00000117385|ENST00000296388|P3H1;REV__ENST00000460031.5_1_1:43220834-43232642:-|nuORF;REV__ENST00000492956.1_1_1:43227954-43232675:-|nuORF;REV__ENST00000495874.5_1_1:43222117-43232675:-|nuORF;REV__nc|ENSG00000117385|Q32P28-2|P3H1;REV__nc|ENSG00000117385|Q32P28-3|P3H1;REV__nc|ENSG00000117385|Q32P28-4|P3H1;REV__P3H1|p.R359Vfs*40|1|0.29|ENSG00000117385|chr1:42757788-42757788|G/-|frameshift_variant	31.954861631926434	1.7418937515398478	3				NaN	NaN	0	NaN	6191	4502	10692
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10696	32.111	NaN	2179	30	0	968.39	0.036			+	33483	RKAPGLHFW	9	61	556.311220346108	1110.607887759016	2	556.3111572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RKAPGLHFW_	REV__ENST00000240487.5_2_4:154556692-154557535:+|nuORF	34.172542307311794	0.4838870758800184	3				NaN	NaN	0	NaN	6192	4502	10692
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10702	32.125	NaN	6302.7	30	0	1285.2	0.214				-1	 	0	66	495.772389884041	989.530226834882	2	495.7716369628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	6195	4505	10701
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10703	32.129	NaN	1933.8	30	0	212.46	0.106	+			13466	GLKVPTTITL	10	59	521.8292189723772	NaN	0	521.82861328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GLKVPTTITL_	ENSG00000114982|ENST00000431828|KANSL3;ENST00000447759.5_3_2:97261350-97293793:-|nuORF;ENST00000484020.1_1_2:97261350-97267559:-|nuORF;ENST00000597150.5_1_2:97261350-97297069:-|nuORF;nc|ENSG00000114982|Q9P2N6-4|KANSL3;nc|ENSG00000114982|Q9P2N6-5|KANSL3;nc|ENSG00000114982|Q9P2N6-6|KANSL3;nc|ENSG00000114982|Q9P2N6|KANSL3	25.57405402267927	0.4162033004763879	3				NaN	NaN	0	NaN	6196	4505	10701
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10704	32.131	NaN	1525.9	30	0	92.396	0.106			+	9176	EGPSKTVREV	10	67	551.2978128998994	1100.5810728665988	2	551.298095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EGPSKTVREV_	REV__ENSG00000088833|ENST00000216879|NSFL1C;REV__nc|ENSG00000088833|Q9UNZ2-4|NSFL1C;REV__nc|ENSG00000088833|Q9UNZ2-5|NSFL1C;REV__nc|ENSG00000088833|Q9UNZ2-6|NSFL1C	61.691277971877994	0.35045824941635534	3				NaN	NaN	0	NaN	6197	4505	10701
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10705	32.133	NaN	1221.3	30	0	147.6	0.106				-1	MKSDKKIAV	9	57	518.294921875	NaN	0	518.294921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_M(Oxidation (M))KSDKKIAV_	ENSG00000180071|ENST00000399703|ANKRD18A;ENST00000354752.5_1_9:99922575-99942308:-|nuORF;nc|ENSG00000180071|Q8IVF6-2|ANKRD18A	32.81241826257853	0.3119040447479903	3				NaN	NaN	0	NaN	6198	4505	10701
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10706	32.135	NaN	2652.6	30	0	595.63	0.038	+			19600	KDFEKTPNST	10	54	389.52857413761745	1165.5638930130524	3	389.52764892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KDFEKTPNST_	ENSG00000076641|ENST00000220597|PAG1	29.550750289552195	0.6385079145554603	3				NaN	NaN	0	NaN	6199	4505	10701
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10712	32.149	NaN	2192.6	30	0	230.45	0.214	+			10591	EYKNTNEMF	9	62	588.2561174218519	1174.4976819105036	2	588.255615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EYKNTNEMF_	ENSG00000065243|ENST00000370521|PKN2;nc|ENSG00000065243|Q16513-2|PKN2;nc|ENSG00000065243|Q16513-3|PKN2;nc|ENSG00000065243|Q16513-4|PKN2;nc|ENSG00000065243|Q16513-5|PKN2	58.78195531508484	0.22376836668196862	3				NaN	NaN	0	NaN	6202	4508	10711
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10713	32.153	NaN	2761.1	30	0	350.42	0.106			+	-1	CKGGIVLCIM	10	68	583.7887292239261	1165.5629055146521	2	583.78857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C),Oxidation (M)	_C(Carbamidomethyl (C))KGGIVLC(Carbamidomethyl (C))IM(Oxidation (M))_	REV__ENST00000355765.10_1_14:45584217-45584328:+|nuORF	44.116797842482775	0.5112108506279902	3				NaN	NaN	0	NaN	6203	4508	10711
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10714	32.155	NaN	1347.2	30	0	174.64	0.106	+			40660	SVASAAAVLSH	11	63	506.7737163455539	NaN	0	506.77435302734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVASAAAVLSH_	ENSG00000118705|ENST00000237530|RPN2;nc|ENSG00000118705|P04844-2|RPN2	37.81151784470057	0.3969060959064013	3				NaN	NaN	0	NaN	6204	4508	10711
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10715	32.157	NaN	2362.9	30	0	215.25	0.035	+			28420	NETVAIHSL	9	59	492.26193107545	982.5093092177	2	492.2604675292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NETVAIHSL_	ENSG00000082269|ENST00000418814|FAM135A;FAM135A|p.N1165Ifs*3|1|0.07|ENSG00000082269|chr6:70526577-70526578|-/T|frameshift_variant;FAM135A|p.N999Ifs*5|1|0.39|ENSG00000082269|chr6:70526073-70526073|A/-|frameshift_variant;FAM135A|p.N999Kfs*2|1|0.18|ENSG00000082269|chr6:70526072-70526073|-/A|frameshift_variant;nc|ENSG00000082269|Q9P2D6-2|FAM135A;nc|ENSG00000082269|Q9P2D6-3|FAM135A;nc|ENSG00000082269|Q9P2D6-4|FAM135A	85.16082228582465	0.07850854922700509	3				NaN	NaN	0	NaN	6205	4508	10711
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10720	32.171	NaN	2221.4	30	0	133.26	0.214	+			49214	VVMVQICGR	9	60	502.773700593792	NaN	0	502.77349853515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVMVQICGR_	ADGRG6|p.F1083Lfs*9|1|0.32|ENSG00000112414|chr6:142420031-142420031|T/-|frameshift_variant;ADGRG6|p.S1069Rfs*9|1|0.04|ENSG00000112414|chr6:142419991-142419992|-/GTCACATAAAA|frameshift_variant;ENSG00000112414|ENST00000367609|ADGRG6;ENST00000472054.2_1_6:142738255-142764649:+|nuORF;nc|ENSG00000112414|Q86SQ4-2|ADGRG6;nc|ENSG00000112414|Q86SQ4-4|ADGRG6;nc|ENSG00000112414|Q86SQ4|ADGRG6	57.81127852772723	0.15865383123342353	3				NaN	NaN	0	NaN	6207	4511	10719
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10721	32.174	NaN	1718.7	30	0	135.57	0.106	+			16311	HEIEALKSF	9	61	537.285414286618	1072.556275640036	2	537.2845458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HEIEALKSF_	ENSG00000078618|ENST00000352171|NRDC;nc|ENSG00000078618|O43847-2|NRDC	56.43379154798735	0.2433427591689151	3				NaN	NaN	0	NaN	6208	4511	10719
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10722	32.176	NaN	1187.2	30	0	216.09	0.106			+	29832	PKVDVHVLT	9	31	336.53425967492996	NaN	0	336.53424072265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PKVDVHVLT_	REV__CLSTN2|p.Q250H|1|0.33|ENSG00000158258|chr3:140421237-140421237|G/T|missense_variant	21.9598887501803	0.3626577482100488	3				NaN	NaN	0	NaN	6209	4511	10719
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10723	32.178	NaN	2596.6	30	0	430.5	0.106			+	19643	KDKMIMQR	8	61	525.2845217930455	NaN	0	525.2852783203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KDKMIMQR_	REV__ENSG00000100342|ENST00000397278|APOL1;REV__nc|ENSG00000100342|O14791-2|APOL1;REV__nc|ENSG00000100342|O14791-3|APOL1	32.81241826257853	1.7418937515398478	3				NaN	NaN	0	NaN	6210	4511	10719
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10724	32.18	NaN	1953.2	30	0	397.8	0.106	+			3961	ATATLIIEH	9	52	484.7745946785518	967.5346364239036	2	484.774169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATATLIIEH_	ENSG00000100522|ENST00000216410|GNPNAT1;ENST00000553987.1_1_14:53248483-53250189:-|nuORF	69.6276240434122	0.14239879520340665	3				NaN	NaN	0	NaN	6211	4511	10719
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10725	32.181	NaN	1830.6	30	0	248.53	0.034	+			4301	ATGIILPAR	9	53	456.28733533203825	910.5601177308765	2	456.7881774902344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATGIILPAR_	ENSG00000163909|ENST00000372852|HEYL	49.44154591367651	0.3095138337212152	3				NaN	NaN	0	NaN	6212	4511	10719
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10731	32.196	NaN	1852.7	30	0	112.09	0.214			+	29389	PAPPFSVPQAI	11	57	562.3124839598908	1122.6104149865814	2	562.3125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PAPPFSVPQAI_	REV__KRTAP4-6|p.Q49Sfs*162|1|0.33|ENSG00000198090|chr17:41140343-41140343|G/-|frameshift_variant	36.31764250033197	0.6083289427130232	3				NaN	NaN	0	NaN	6215	4514	10730
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10732	32.2	NaN	2275.1	30	0	340.51	0.106			+	-1	CVLPRCLGL	9	58	515.7799553957008	1029.5453578582014	2	515.7799072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_CVLPRC(Carbamidomethyl (C))LGL_	REV__ENST00000367204.5_1_1:204095788-204096322:+|nuORF	31.954861631926434	0.5046124803899898	3				NaN	NaN	0	NaN	6216	4514	10730
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10733	32.201	NaN	1674.3	30	0	182.11	0.106				-1	EMVTFVCR	8	60	529.2430419921875	NaN	0	529.2430419921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_EM(Oxidation (M))VTFVC(Carbamidomethyl (C))R_	ENSG00000161835|ENST00000293662|TAMALIN;ENST00000552049.5_1_12:52404317-52404936:+|nuORF	37.15910966729921	1.7418937515398478	3				NaN	NaN	0	NaN	6217	4514	10730
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10734	32.203	NaN	1538.9	30	0	170.32	0.106				-1	KEDIKMANK	9	63	546.7879924142266	1091.561431895253	2	546.7902221679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_KEDIKM(Oxidation (M))ANK_	L1ME1_dup14741|chr8:25510836-25512219:-|1.4707505823140987|0.2188578600898351|2.75|482.0|33|2|sense	36.446750945000026	0.4619375763483977	3				NaN	NaN	0	NaN	6218	4514	10730
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10735	32.205	NaN	1346.7	30	0	118.56	0.034			+	30651	QATSPFLAK	9	64	481.76931680061784	961.5240806680357	2	481.7701416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QATSPFLAK_	REV__ENSG00000010244|ENST00000394670|ZNF207;REV__ENST00000584696.1_1_17:30693734-30695045:+|nuORF;REV__nc|ENSG00000010244|O43670-3|ZNF207;REV__nc|ENSG00000010244|O43670|ZNF207	40.05817265558897	0.419577045485086	3				NaN	NaN	0	NaN	6219	4514	10730
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10740	32.219	NaN	7308.9	30	0	1680.5	0.214	+			14190	GSSAINILK	9	65	451.7691502121339	901.5237474910679	2	451.7685241699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSSAINILK_	ENSG00000167522|ENST00000301030|ANKRD11;ENST00000330736.9_1_16:89334888-89371640:-|nuORF	69.6276240434122	0.14239879520340665	3				NaN	NaN	0	NaN	6221	4517	10739
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10741	32.223	NaN	4748.2	30	0	943.51	0.106	+			29690	PGTALDALGPH	11	64	524.7751264131716	1047.5356998931431	2	524.7752685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PGTALDALGPH_	ENST00000530405.5_3_11:47204576-47204690:-|nuORF	56.72105179125745	0.35272424613657194	3				NaN	NaN	0	NaN	6222	4517	10739
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10742	32.225	NaN	3379.5	30	0	425.94	0.106	+			30450	PYTKVEESF	9	69	550.2692752935397	1098.5239976538794	2	550.2698974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PYTKVEESF_	ENSG00000182858|ENST00000330817|ALG12	80.45461616416974	0.09558281504443908	3				NaN	NaN	0	NaN	6223	4517	10739
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10743	32.227	NaN	1989.6	30	0	125.06	0.037			+	29218	NVVILNGLPVC	11	64	570.8268432617188	NaN	0	570.8268432617188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NVVILNGLPVC_	REV__ENSG00000100225|ENST00000266087|FBXO7;REV__ENST00000492535.1_1_22:32875160-32883832:+|nuORF;REV__nc|ENSG00000100225|Q9Y3I1-2|FBXO7;REV__nc|ENSG00000100225|Q9Y3I1-3|FBXO7	45.97224482568171	0.34424757290527136	3				NaN	NaN	0	NaN	6224	4517	10739
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10747	32.24	NaN	4482	30	0	756.84	0.214	+			46231	VEAVEQNTL	9	70	501.759289748472	1001.504026563744	2	501.75830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VEAVEQNTL_	ENSG00000142669|ENST00000270792|SH3BGRL3;ENST00000319041.6_1_1:26607416-26607611:+|nuORF	85.86182877749512	0.07653218437724067	3				NaN	NaN	0	NaN	6225	4520	10746
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10748	32.244	NaN	4677.5	30	0	1008.4	0.106	+			15004	GTNALLVVK	9	62	457.7872228184323	913.5598927036647	2	457.78704833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTNALLVVK_	ENSG00000006712|ENST00000221265|PAF1;nc|ENSG00000006712|Q8N7H5-2|PAF1;nc|ENSG00000006712|Q8N7H5-3|PAF1	162.25246889848123	0.0040893836092247005	3				NaN	NaN	0	NaN	6226	4520	10746
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10749	32.246	NaN	1727.8	30	0	163.51	0.106				-1	 	0	50	470.7952629193319	939.5759729054638	2	470.7940368652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	6227	4520	10746
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10750	32.248	NaN	2091	30	0	280.24	0.034			+	29530	PEELKPNP	8	54	462.2447280941048	NaN	0	462.24493408203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PEELKPNP_	REV__ENST00000392510.3_1_14:106138974-106139307:-|nuORF	33.51558372728122	1.7418937515398478	3				NaN	NaN	0	NaN	6228	4520	10746
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10756	32.264	NaN	3624.3	30	0	216.73	0.214	+			49676	VYKCLSENI	9	70	563.28429233982	1124.55403174644	2	563.2840576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_VYKC(Carbamidomethyl (C))LSENI_	ENSG00000082898|ENST00000401558|XPO1;ENST00000428210.5_1_2:61705957-61719950:-|nuORF;ENST00000461407.5_1_2:61712881-61715780:-|nuORF	54.722347961057174	0.257609425301511	3				NaN	NaN	0	NaN	6231	4523	10755
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10757	32.267	NaN	1749.3	30	0	159.74	0.034	+			2559	AQATISFPK	9	57	481.76931680061784	961.5240806680357	2	481.76885986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AQATISFPK_	CDC6|p.P86Lfs*17|1|0.14|ENSG00000094804|chr17:40291132-40291132|C/-|frameshift_variant;ENSG00000094804|ENST00000209728|CDC6	44.377184641726394	0.36891676396732553	3				NaN	NaN	0	NaN	6232	4523	10755
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10761	32.281	NaN	3790.6	30	0	602.27	0.214	+			43189	TETVLRQAI	9	71	515.7988953629095	1029.583237792619	2	515.7988891601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TETVLRQAI_	EEF2|p.E241Rfs*13|1|0.26|ENSG00000167658|chr19:3982316-3982316|C/-|frameshift_variant;ENSG00000167658|ENST00000309311|EEF2	36.446750945000026	0.4619375763483977	3				NaN	NaN	0	NaN	6233	4526	10760
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10762	32.285	NaN	3193.2	30	0	397	0.106	+			25598	LQKEEKISP	9	68	536.3064978256397	1070.5984427180792	2	536.3060913085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LQKEEKISP_	BRIP1|p.A496V|1|0.12|ENSG00000136492|chr17:61784411-61784411|G/A|missense_variant;ENSG00000136492|ENST00000259008|BRIP1;nc|ENSG00000136492|Q9BX63-2|BRIP1	82.7504851949679	0.08565546331141553	3				NaN	NaN	0	NaN	6234	4526	10760
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10763	32.287	NaN	1631.2	30	0	170.08	0.106			+	25165	LLVKPLQN	8	52	462.79757058195537	923.5805882307108	2	462.7973937988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LLVKPLQN_	REV__ENST00000587091.5_2_X:73751613-73751946:+|nuORF	47.91560031466742	0.6071945918984287	3				NaN	NaN	0	NaN	6235	4526	10760
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10764	32.289	NaN	1058.1	30	0	156.99	0.106			+	51032	YKRYVAVG	8	54	478.271988511936	954.529424090672	2	478.27099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YKRYVAVG_	REV__ENSG00000070159|ENST00000374541|PTPN3;REV__nc|ENSG00000070159|P26045-2|PTPN3;REV__nc|ENSG00000070159|P26045-3|PTPN3;REV__PTPN3|p.P658Afs*20|1|0.15|ENSG00000070159|chr9:109391544-109391545|-/T|frameshift_variant	26.79610172149135	0.7524337208463756	3				NaN	NaN	0	NaN	6236	4526	10760
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10765	32.29	NaN	2524.7	30	0	363.46	0.106	+			19003	IVVEHIIMK	9	65	541.3258956934841	1080.637238453768	2	541.3267211914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IVVEHIIMK_	ENSG00000109133|ENST00000504986|TMEM33;TMEM33|p.L211P|1|0.2|ENSG00000109133|chr4:41954087-41954087|T/C|missense_variant	88.17693792209575	0.07000514020414955	3				NaN	NaN	0	NaN	6237	4526	10760
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10766	32.292	NaN	2881.6	30	0	323.23	0.106			+	-1	SLVSVHCVE	9	60	515.2539443146533	1028.4933356961064	2	515.2529907226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_SLVSVHC(Carbamidomethyl (C))VE_	REV__nc|ENSG00000138835|P49796|RGS3	37.15910966729921	0.4535818937225704	3				NaN	NaN	0	NaN	6238	4526	10760
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10767	32.294	NaN	1131.2	30	0	114.88	0.032	+			43797	TLLPASIGG	9	46	414.7446691928021	NaN	0	414.7443542480469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TLLPASIGG_	ENST00000463473.2_1_1:207087354-207095257:-|nuORF	37.15910966729921	0.2899585034171616	3				NaN	NaN	0	NaN	6239	4526	10760
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10772	32.308	NaN	3303.7	30	0	820.54	0.214			+	37172	SIWVPVDEV	9	68	522.273908327677	1042.5332637221538	2	522.2745971679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIWVPVDEV_	REV__ENST00000553678.1_1_14:85995020-85995465:+|nuORF	44.116797842482775	0.37197099687881774	3				NaN	NaN	0	NaN	6241	4529	10771
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10773	32.312	NaN	1539.3	30	0	160.42	0.036	+			9045	EGFTLRPYA	9	59	527.2730135785357	1052.5314742238713	2	527.2730102539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EGFTLRPYA_	tr|U7T6A2|U7T6A2_FUSNUAutotransporterdomain-containingprotein(Fragment)OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00182PE=4SV=1	40.77816245573522	0.41113185337114944	3				NaN	NaN	0	NaN	6242	4529	10771
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10780	32.328	NaN	3047.3	30	0	539.18	0.214	+			11090	FFAGMAVLSGP	11	68	548.7768609532698	1095.5391689733394	2	548.780029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FFAGMAVLSGP_	ENSG00000168679|ENST00000369779|SLC16A4;nc|ENSG00000168679|O15374-2|SLC16A4;nc|ENSG00000168679|O15374-3|SLC16A4;nc|ENSG00000168679|O15374-4|SLC16A4;nc|ENSG00000168679|O15374-5|SLC16A4	49.44154591367651	0.42875387410569	3				NaN	NaN	0	NaN	6246	4532	10779
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10781	32.332	NaN	2088.3	30	0	182.07	0.106			+	-1	GLVCGSLGL	9	55	438.23664656109236	874.4587401889847	2	438.2364807128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GLVC(Carbamidomethyl (C))GSLGL_	REV__ENST00000285279.9_1_7:55539450-55539720:-|nuORF	50.0245360154114	0.3026755932229825	3				NaN	NaN	0	NaN	6247	4532	10779
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10782	32.334	NaN	2516.2	30	0	251.14	0.106			+	11292	FKLHGVISSV	10	61	543.8192335022419	1085.6239140712837	2	543.8191528320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FKLHGVISSV_	REV__ACTRT2|p.D336Rfs*18|1|0.45|ENSG00000169717|chr1:3022685-3022686|-/C|frameshift_variant;REV__ACTRT2|p.D336Tfs*16|1|0.26|ENSG00000169717|chr1:3022686-3022686|C/-|frameshift_variant;REV__ENSG00000169717|ENST00000378404|ACTRT2	39.252832667884924	0.5560298534376815	3				NaN	NaN	0	NaN	6248	4532	10779
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10783	32.336	NaN	2646.4	30	0	219.77	0.106			+	25833	LSDQTSGVVL	10	68	509.77256589111676	1017.5305788490335	2	509.77044677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSDQTSGVVL_	REV__ENSG00000174483|ENST00000318312|BBS1;REV__ENST00000527959.1_1_11:66290957-66294394:+|nuORF;REV__ENST00000529955.5_1_11:66281964-66299243:+|nuORF;REV__nc|ENSG00000174483|Q8NFJ9-2|BBS1	44.377184641726394	0.5088115166961078	3				NaN	NaN	0	NaN	6249	4532	10779
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10784	32.337	NaN	2041.8	30	0	474.02	0.034	+			18096	IKQSIVEL	8	55	465.2868583419016	928.5591637506033	2	465.28631591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IKQSIVEL_	DNAH17|p.D2341Tfs*111|1|0.32|ENSG00000187775|chr17:78486305-78486305|G/-|frameshift_variant;DNAH17|p.G2596Afs*13|1|0.33|ENSG00000187775|chr17:78479600-78479600|G/-|frameshift_variant;DNAH17|p.K3895Nfs*2|1|0.24|ENSG00000187775|chr17:78439210-78439210|T/-|frameshift_variant;DNAH17|p.N4131Tfs*34|2|0.38|ENSG00000187775|chr17:78429136-78429136|G/-|frameshift_variant;ENSG00000187775|ENST00000389840|DNAH17	27.882242232435846	0.7440473649773525	3				NaN	NaN	0	NaN	6250	4532	10779
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10789	32.352	NaN	2116.5	30	0	164.65	0.214	+			9362	EITGRQAF	8	48	461.2430095091553	920.4714660851106	2	461.2426452636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EITGRQAF_	ENST00000508090.1_1_5:180242535-180242607:-|nuORF	40.77816245573522	0.6514838689002179	3				NaN	NaN	0	NaN	6252	4535	10788
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10790	32.355	NaN	1948	30	0	237.85	0.106	+			41256	SVLGVTVTR	9	52	466.2812195742158	930.5478862152316	2	466.2811584472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVLGVTVTR_	DIP2C|p.H1200Lfs*7|1|0.08|ENSG00000151240|chr10:329587-329588|-/GCCCA|frameshift_variant;ENSG00000151240|ENST00000280886|DIP2C	49.536043120802724	0.308405419312776	3				NaN	NaN	0	NaN	6253	4535	10788
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10791	32.357	NaN	1952.7	30	0	401.57	0.106			+	29545	PELPTRDVV	9	57	513.2853449719714	1024.5561370107428	2	513.2853393554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PELPTRDVV_	REV__BMS1|p.L617Afs*20|1|0.26|ENSG00000165733|chr10:42797085-42797086|-/A|frameshift_variant;REV__ENSG00000165733|ENST00000374518|BMS1;REV__ENST00000399449.3_1_10:75487125-75488312:-|nuORF;REV__ENST00000453174.7_2_10:81666360-81667538:+|nuORF	39.252832667884924	0.4290233611298554	3				NaN	NaN	0	NaN	6254	4535	10788
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10792	32.359	NaN	1698.3	30	0	359.56	0.106			+	18568	ISNVVLDHH	9	57	517.2731878483197	1032.5318227634393	2	517.2733154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ISNVVLDHH_	REV__tr|U7STM1|U7STM1_FUSNUZetatoxindomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01537PE=4SV=1	34.172542307311794	0.4838870758800184	3				NaN	NaN	0	NaN	6255	4535	10788
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10793	32.361	NaN	2108.4	30	0	183.11	0.037			+	28471	NFVLVFQGLQ	10	70	582.822770079087	1163.630987224974	2	582.8226318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NFVLVFQGLQ_	REV__DYNC1H1|p.R1925Q|1|0.12|ENSG00000197102|chr14:102007065-102007065|G/A|missense_variant	54.776311868738084	0.41334902933431344	3				NaN	NaN	0	NaN	6256	4535	10788
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10799	32.377	NaN	4167.7	30	0	657.48	0.214	+			24863	LKELGTKY	8	65	476.2795579986723	950.5445630641447	2	476.2786865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LKELGTKY_	ENSG00000104626|ENST00000250263|ERI1;ENST00000518663.1_1_8:8873876-8973944:+|nuORF;ENST00000520332.5_1_8:8869238-8946074:+|nuORF	29.14955571784316	0.7342621283720113	3				NaN	NaN	0	NaN	6259	4538	10798
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10800	32.38	NaN	2626.6	30	0	292.43	0.035	+			49378	VVSVILEQK	9	62	507.81351675364874	1013.6124805740975	2	507.81256103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVSVILEQK_	ANKFY1|p.P691Rfs*61|1|0.4|ENSG00000185722|chr17:4182230-4182230|G/-|frameshift_variant;ENSG00000185722|ENST00000341657|ANKFY1;nc|ENSG00000185722|Q9P2R3-2|ANKFY1;nc|ENSG00000185722|Q9P2R3-4|ANKFY1	51.19269402634007	0.2889735674168909	3				NaN	NaN	0	NaN	6260	4538	10798
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10804	32.394	NaN	4798.2	30	0	600.39	0.214	+			37315	SLDREGGISL	10	63	523.7773842890768	1045.5402156449536	2	523.7777099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLDREGGISL_	ENSG00000173517|ENST00000682557|PEAK1	61.691277971877994	0.35045824941635534	3				NaN	NaN	0	NaN	6261	4541	10803
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10805	32.398	NaN	3264.1	30	0	282.96	0.106			+	44020	TPLHDECSL	9	71	507.732004973714	1013.4494570142281	2	507.7316589355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TPLHDECSL_	REV__ENSG00000115970|ENST00000405975|THADA;REV__nc|ENSG00000115970|Q6YHU6-2|THADA;REV__nc|ENSG00000115970|Q6YHU6-3|THADA;REV__nc|ENSG00000115970|Q6YHU6-4|THADA	55.50420428727701	0.2510918378945873	3				NaN	NaN	0	NaN	6262	4541	10803
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10806	32.4	NaN	2789.3	30	0	436.12	0.106			+	43818	TLQKEAVL	8	53	451.27137052541497	900.52818811763	2	451.7688903808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TLQKEAVL_	REV__ENST00000590617.5_1_18:34415331-34802187:+|nuORF;REV__ENST00000599493.1_1_18:34647308-34664196:+|nuORF;REV__nc|ENSG00000150477|Q86T90-3|KIAA1328	47.657333605630114	0.6087971902037268	3				NaN	NaN	0	NaN	6263	4541	10803
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10807	32.402	NaN	2621.7	30	0	283.37	0.106	+			142	AAGRFLASAIS	11	59	532.2989924293721	1062.5834319255441	2	532.2992553710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AAGRFLASAIS_	ENST00000529051.5_1_11:124824106-124824726:+|nuORF	49.536043120802724	0.4274608637932522	3				NaN	NaN	0	NaN	6264	4541	10803
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10808	32.403	NaN	3627.7	30	0	328.08	0.106	+			11667	FQQEREAF	8	62	527.7514587918689	1053.4883646505377	2	527.7517700195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FQQEREAF_	ENSG00000163798|ENST00000326019|SLC4A1AP;nc|ENSG00000163798|Q9BWU0-1|SLC4A1AP;SLC4A1AP|p.F378Lfs*8|1|0.18|ENSG00000163798|chr2:27667375-27667375|T/-|frameshift_variant;SLC4A1AP|p.L669Tfs*8|1|0.38|ENSG00000163798|chr2:27685159-27685160|-/A|frameshift_variant	45.9519527083369	0.6193794311207887	3				NaN	NaN	0	NaN	6265	4541	10803
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10809	32.405	NaN	1574.4	30	0	352.21	0.106			+	-1	AMKFLAIAL	9	33	331.8663457440824	992.5772078324474	3	331.8662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_AM(Oxidation (M))KFLAIAL_	REV__ENST00000595595.1_1_10:75385822-75386008:+|nuORF	34.172542307311794	0.4838870758800184	3				NaN	NaN	0	NaN	6266	4541	10803
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10810	32.407	NaN	1134.3	30	0	296.45	0.031				-1	 	0	35	350.20708557058185	698.3996182079637	2	350.20654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	6267	4541	10803
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10816	32.421	NaN	7273.5	30	0	665.87	0.214	+			35309	SAMKAVTEL	9	66	475.2551690960363	948.4957852588726	2	475.254638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAMKAVTEL_	ENSG00000128245|ENST00000248975|YWHAH	90.60085204095205	0.06317133949006545	3				NaN	NaN	0	NaN	6270	4544	10815
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10817	32.425	NaN	3935.9	30	0	371.18	0.106	+			6517	AYATHPFKF	9	69	541.2775762410777	1080.5405995489552	2	541.2776489257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AYATHPFKF_	ENSG00000111912|ENST00000392477|NCOA7;nc|ENSG00000111912|Q8NI08-2|NCOA7;nc|ENSG00000111912|Q8NI08-5|NCOA7;nc|ENSG00000111912|Q8NI08-7|NCOA7	99.37495909608758	0.03983967222258828	3				NaN	NaN	0	NaN	6271	4544	10815
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10818	32.427	NaN	2921	30	0	461.53	0.106			+	19264	KAEQVSEVL	9	59	501.7766893779296	1001.5388258226592	2	501.77716064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KAEQVSEVL_	REV__ENSG00000121988|ENST00000264159|ZRANB3;REV__ENST00000403017.2_1_2:135957914-136028945:-|nuORF;REV__nc|ENSG00000121988|Q5FWF4-2|ZRANB3;REV__nc|ENSG00000121988|Q5FWF4-3|ZRANB3	34.172542307311794	0.4838870758800184	3				NaN	NaN	0	NaN	6272	4544	10815
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10819	32.429	NaN	4301.8	30	0	653.55	0.106	+			34857	RYSSMAASF	9	61	510.2345943050203	1018.4546356768407	2	510.2345886230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RYSSMAASF_	ENSG00000162366|ENST00000294338|PDZK1IP1	60.11826168202944	0.21262886028301267	3				NaN	NaN	0	NaN	6273	4544	10815
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10820	32.431	NaN	2623.9	30	0	302.74	0.106			+	44146	TQIEKAVL	8	57	451.27137052541497	900.52818811763	2	451.77032470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TQIEKAVL_	REV__ENSG00000072042|ENST00000381346|RDH11;REV__ENST00000553578.5_1_14:68159068-68159317:-|nuORF;REV__ENST00000553816.5_1_14:68151682-68162420:-|nuORF;REV__nc|ENSG00000072042|Q8TC12-2|RDH11;REV__nc|ENSG00000072042|Q8TC12-3|RDH11	58.78195531508484	0.5138399468736706	3				NaN	NaN	0	NaN	6274	4544	10815
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10821	32.432	NaN	3890.9	30	0	1827.1	0.106				-1	MSIVQQRGF	9	44	361.1873836253795	1080.5403214763385	3	361.1868896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_M(Oxidation (M))SIVQQRGF_	tr|U7SS22|U7SS22_FUSNUVirB4familytypeIVsecretion/conjugaltransferATPaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01513PE=3SV=1	25.57405402267927	0.5642445186134241	3				NaN	NaN	0	NaN	6275	4544	10815
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10822	32.434	NaN	1803.6	30	0	209.16	0.033			+	-1	CSGAALRL	8	44	424.22715568813294	846.4397584430659	2	424.2264099121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_C(Carbamidomethyl (C))SGAALRL_	REV__ENSG00000114023|ENST00000477892|FAM162A	19.359975847455235	0.7988239741663654	3				NaN	NaN	0	NaN	6276	4544	10815
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10829	32.452	NaN	2051.7	30	0	230.33	0.214	+			41262	SVLIQKQIFK	10	66	602.377350280178	1202.740147627156	2	602.8788452148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVLIQKQIFK_	ENSG00000205339|ENST00000379719|IPO7;ENST00000528833.1_1_11:9431619-9435997:+|nuORF;IPO7|p.D430Mfs*6|1|0.18|ENSG00000205339|chr11:9425208-9425208|A/-|frameshift_variant;IPO7|p.M511Cfs*3|1|0.19|ENSG00000205339|chr11:9429134-9429134|A/-|frameshift_variant	77.53327743719008	0.21577387331637743	3				NaN	NaN	0	NaN	6280	4547	10828
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10830	32.456	NaN	2119.8	30	0	443.11	0.106	+			14703	GTIGLTIAK	9	56	437.27385476911843	872.5331566050369	2	437.2738952636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTIGLTIAK_	ENSG00000112992|ENST00000344920|NNT	71.87747018426188	0.13267044672804276	3				NaN	NaN	0	NaN	6281	4547	10828
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10831	32.457	NaN	3622	30	0	1920.9	0.106	+			41263	SVLIQKQIFK	10	39	401.9206390131005	1202.7400876395016	3	402.25390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVLIQKQIFK_	ENSG00000205339|ENST00000379719|IPO7;ENST00000528833.1_1_11:9431619-9435997:+|nuORF;IPO7|p.D430Mfs*6|1|0.18|ENSG00000205339|chr11:9425208-9425208|A/-|frameshift_variant;IPO7|p.M511Cfs*3|1|0.19|ENSG00000205339|chr11:9429134-9429134|A/-|frameshift_variant	32.75053402867276	0.6123771875927935	3				NaN	NaN	0	NaN	6282	4547	10828
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10832	32.459	NaN	2014.2	30	0	775.03	0.034	+			13977	GSATSLVFK	9	46	455.25603777078715	908.4975226083743	2	455.2559509277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GSATSLVFK_	ENSG00000227345|ENST00000616448|PARG;PARG|p.D904Tfs*4|1|0.16|ENSG00000227345|chr10:49820231-49820231|C/-|frameshift_variant;PARG|p.N277Mfs*5|3|0.4|ENSG00000227345|chr10:49933618-49933618|T/-|frameshift_variant	60.11826168202944	0.21262886028301267	3				NaN	NaN	0	NaN	6283	4547	10828
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10836	32.473	NaN	2415.3	30	0	292.58	0.214				-1	CRGAAQERG	9	63	502.7381548230842	1003.4617567129684	2	502.7378845214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_C(Carbamidomethyl (C))RGAAQERG_	ENST00000533558.5_1_11:7695202-7695337:-|nuORF	31.529811441608018	0.5085848003137583	3				NaN	NaN	0	NaN	6284	4550	10835
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10837	32.477	NaN	2359	30	0	258.52	0.106				-1	 	0	65	495.772389884041	989.530226834882	2	495.7717590332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	6285	4550	10835
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10838	32.479	NaN	3261.7	30	0	498.64	0.106	+			21080	KKMKRGYF	8	67	529.3039454377146	NaN	0	529.3031616210938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KKMKRGYF_	ENSG00000137338|ENST00000682144|PGBD1	28.2542754592877	1.7418937515398478	3				NaN	NaN	0	NaN	6286	4550	10835
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10839	32.481	NaN	1171.8	30	0	154.52	0.106			+	6933	CNWGAFPVF	9	49	520.7384075025809	NaN	0	520.7384033203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_CNWGAFPVF_	REV__ENST00000417549.1_1_13:28788954-28789521:+|nuORF	40.5726180659479	0.27166212580479165	3				NaN	NaN	0	NaN	6287	4550	10835
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10840	32.482	NaN	1879.6	30	0	252.3	0.106			+	27681	MPVAQPSSSY	10	61	533.74640946335	1065.4782659935	2	533.7454223632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MPVAQPSSSY_	REV__nc|ENSG00000152102|A1KXE4-2|FAM168B	31.529811441608018	0.6223461015008678	3				NaN	NaN	0	NaN	6288	4550	10835
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10841	32.484	NaN	1303.7	30	0	114.95	0.106	+			19601	KDFETWLDNIS	11	44	684.3279009266988	1366.6412489201975	2	684.3282470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KDFETWLDNIS_	ENSG00000119402|ENST00000608872|FBXW2;nc|ENSG00000119402|Q9UKT8-2|FBXW2	38.753607047826485	0.5749975102143227	3				NaN	NaN	0	NaN	6289	4550	10835
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10842	32.486	NaN	1826.3	30	0	413.53	0.035	+			11383	FLLPSAPALG	10	58	493.28847893738856	984.5624049415771	2	493.2874755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FLLPSAPALG_	ENSG00000204385|ENST00000229729|SLC44A4;nc|ENSG00000204385|Q53GD3-3|SLC44A4;nc|ENSG00000204385|Q53GD3-4|SLC44A4;SLC44A4|p.F618Sfs*25|1|0.43|ENSG00000204385|chr6:31864889-31864889|A/-|frameshift_variant;SLC44A4|p.G398Afs*7|1|0.29|ENSG00000204385|chr6:31869197-31869197|G/-|frameshift_variant;SLC44A4|p.S619Lfs*9|1|0.31|ENSG00000204385|chr6:31864888-31864889|-/A|frameshift_variant	37.15910966729921	0.575322462179216	3				NaN	NaN	0	NaN	6290	4550	10835
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10847	32.5	NaN	1636.5	30	0	139.11	0.214	+			38387	SRTRVRELQ	9	68	572.8327488062687	NaN	0	572.8320922851562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SRTRVRELQ_	ENSG00000180667|ENST00000315927|YOD1;nc|ENSG00000180667|Q5VVQ6-2|YOD1	58.2462437865262	0.1567987007793744	3				NaN	NaN	0	NaN	6292	4553	10846
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10848	32.504	NaN	1565.7	30	0	133.82	0.106	+			28318	NEFTTHVM	8	67	489.7212099291766	977.4278669251532	2	489.7217712402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NEFTTHVM_	ENSG00000167081|ENST00000373489|PBX3;ENSG00000185630|ENST00000420696|PBX1;ENSG00000204304|ENST00000375050|PBX2;ENST00000478678.5_1_6:32154995-32157692:-|nuORF;ENST00000538998.1_1_9:128606084-128725334:+|nuORF;nc|ENSG00000167081|P40426-2|PBX3;nc|ENSG00000167081|P40426-5|PBX3;nc|ENSG00000185630|P40424-2|PBX1;nc|ENSG00000185630|P40424-3|PBX1	40.77816245573522	0.6514838689002179	3				NaN	NaN	0	NaN	6293	4553	10846
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10849	32.506	NaN	826.96	30	0	71.497	0.106			+	24518	LGKQALAS	8	39	394.23762338459596	786.460693835992	2	394.23699951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LGKQALAS_	REV__RHOQ|p.T167A|1|0.33|ENSG00000119729|chr2:46580964-46580964|A/G|missense_variant	31.954861631926434	0.7126016770032289	3				NaN	NaN	0	NaN	6294	4553	10846
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10850	32.507	NaN	1302	30	0	99.554	0.106	+			27766	MRGLTTTEL	9	58	519.2673814725488	1036.5202100118975	2	519.26708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_M(Oxidation (M))RGLTTTEL_	DCAF4L2|p.P110T|1|0.09|ENSG00000176566|chr8:87873644-87873644|G/T|missense_variant	47.657333605630114	0.33044192980041115	3				NaN	NaN	0	NaN	6295	4553	10846
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10851	32.509	NaN	1562.4	30	0	307.03	0.106	+			33328	RGSSGLRGSG	10	60	467.2481633391937	932.4817737451874	2	467.247802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RGSSGLRGSG_	ENST00000355683.9_2_14:31424854-31495419:-|nuORF	40.05817265558897	0.5486090488315611	3				NaN	NaN	0	NaN	6296	4553	10846
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10852	32.511	NaN	2029.6	30	0	142.97	0.106			+	40965	SVGCVVRQ	8	55	424.22715568813294	846.4397584430659	2	424.22637939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVGCVVRQ_	REV__ENSG00000099849|ENST00000397583|RASSF7;REV__nc|ENSG00000099849|Q02833-2|RASSF7;REV__nc|ENSG00000099849|Q02833-3|RASSF7	31.954861631926434	0.7126016770032289	3				NaN	NaN	0	NaN	6297	4553	10846
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10853	32.513	NaN	1906.5	30	0	214.79	0.034			+	23650	LARLTSLF	8	51	460.7819135545235	919.549274175847	2	460.7812194824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LARLTSLF_	REV__MED1|p.N146Ifs*24|1|0.3|ENSG00000125686|chr17:39434312-39434312|T/-|frameshift_variant	42.47446043378293	0.6409579893742323	3				NaN	NaN	0	NaN	6298	4553	10846
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10860	32.53	NaN	3661.7	30	0	688.83	0.214	+			20589	KGAAGFSIGK	10	58	468.2694231543724	934.5242933755449	2	468.26885986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KGAAGFSIGK_	ENSG00000144029|ENST00000272418|MRPS5	49.536043120802724	0.461275219792494	3				NaN	NaN	0	NaN	6302	4556	10859
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10861	32.534	NaN	2580	30	0	846.37	0.106			+	50009	WAVVWPSPE	9	59	535.7692159412744	1069.5238789493487	2	535.76953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WAVVWPSPE_	REV__ENST00000354619.9_1_1:236433277-236445243:-|nuORF	50.0245360154114	0.3026755932229825	3				NaN	NaN	0	NaN	6303	4556	10859
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10862	32.536	NaN	2426.6	30	0	231.83	0.106	+			23766	LCGTLSRLAI	10	64	523.8033224307325	NaN	0	523.80419921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LCGTLSRLAI_	ENSG00000105676|ENST00000535612|ARMC6;nc|ENSG00000105676|Q6NXE6-2|ARMC6	41.42661286455405	0.3598046802465243	3				NaN	NaN	0	NaN	6304	4556	10859
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10863	32.538	NaN	2303.9	30	0	241.19	0.106			+	43524	TGTIVPALKA	10	61	485.8005595109441	969.5865660886882	2	485.7998352050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TGTIVPALKA_	REV__ENSG00000137501|ENST00000359152|SYTL2;REV__nc|ENSG00000137501|Q9HCH5-11|SYTL2;REV__nc|ENSG00000137501|Q9HCH5-7|SYTL2;REV__nc|ENSG00000137501|Q9HCH5-8|SYTL2;REV__SYTL2|p.Q663Tfs*35|1|0.14|ENSG00000137501|chr11:85709344-85709345|-/T|frameshift_variant	49.44154591367651	0.46214596422418036	3				NaN	NaN	0	NaN	6305	4556	10859
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10864	32.54	NaN	1498.9	30	0	109.29	0.106			+	-1	PCLLSWRF	8	59	532.2719024268176	1062.5292519204352	2	532.2709350585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))PCLLSWRF_	REV__ENST00000463363.1_1_2:85826421-85827106:-|nuORF	38.80614096846853	0.6637206697844082	3				NaN	NaN	0	NaN	6306	4556	10859
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10865	32.541	NaN	1165.1	30	0	92.937	0.106	+			36303	SERVVSVL	8	51	444.7606364273653	NaN	0	444.7607116699219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SERVVSVL_	ENSG00000204370|ENST00000375549|SDHD;ENST00000484597.1_1_3:169427217-169427478:+|nuORF;nc|ENSG00000204370|O14521-2|SDHD;nc|ENSG00000204370|O14521-4|SDHD;SDHD|p.T67I|1|0.57|ENSG00000204370|chr11:112088897-112088897|C/T|missense_variant	34.172542307311794	1.7418937515398478	3				NaN	NaN	0	NaN	6307	4556	10859
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10866	32.543	NaN	3356.2	30	0	304.87	0.038	+			34505	RVFVVGVGMTK	11	66	596.8475320489297	1191.6805111646593	2	596.8477783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RVFVVGVGMTK_	ENSG00000116171|ENST00000371514|SCP2;ENST00000528311.5_1_1:53392996-53413692:+|nuORF;nc|ENSG00000116171|P22307-3|SCP2;nc|ENSG00000116171|P22307-7|SCP2;nc|ENSG00000116171|P22307-8|SCP2	91.09343320243018	0.09429844158206832	3				NaN	NaN	0	NaN	6308	4556	10859
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10873	32.561	NaN	4155.3	30	0	562.03	0.214	+			36369	SETDMVRQI	9	67	539.7640527103551	1077.5135524875102	2	539.7648315429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SETDMVRQI_	ENSG00000149823|ENST00000279281|VPS51	136.26810882979174	0.012230845423532208	3				NaN	NaN	0	NaN	6312	4559	10872
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10874	32.565	NaN	3206.4	30	0	317.47	0.106	+			36262	SENKLPAEL	9	61	500.76942563913644	999.5242983450729	2	500.7695617675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SENKLPAEL_	ENSG00000100823|ENST00000216714|APEX1;ENST00000557159.5_1_14:20924026-20925664:+|nuORF	78.26377905018397	0.10505600812668463	3				NaN	NaN	0	NaN	6313	4559	10872
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10875	32.567	NaN	2679.6	30	0	702.94	0.106	+			502	ACFEPANQMVK	11	62	619.2890583804493	1236.5635638276985	2	619.2899169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ACFEPANQMVK_	ENSG00000075886|ENST00000321253|TUBA3D;ENSG00000123416|ENST00000336023|TUBA1B;ENSG00000127824|ENST00000248437|TUBA4A;ENSG00000152086|ENST00000312988|TUBA3E;ENSG00000167552|ENST00000301071|TUBA1A;ENSG00000167553|ENST00000301072|TUBA1C;ENSG00000198033|ENST00000400113|TUBA3C;nc|ENSG00000123416|P68363-2|TUBA1B;nc|ENSG00000127824|P68366-2|TUBA4A;nc|ENSG00000167552|Q71U36-2|TUBA1A;nc|ENSG00000198033|P0DPH7-2|TUBA3C;TUBA3C|p.T361Rfs*18|1|0.17|ENSG00000198033|chr13:19174136-19174136|G/-|frameshift_variant;TUBA3D|p.G366Efs*13|1|0.17|ENSG00000075886|chr2:131482588-131482588|G/-|frameshift_variant;TUBA3D|p.V328Pfs*54|1|0.45|ENSG00000075886|chr2:131480665-131480666|-/CCCAAAGA|frameshift_variant	50.033510581677724	0.4206539900604183	3				NaN	NaN	0	NaN	6314	4559	10872
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10876	32.568	NaN	1431.2	30	0	277.56	0.035			+	21214	KLFPPKTNV	9	58	522.3165142019858	1042.6184754707715	2	522.3182983398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KLFPPKTNV_	REV__ENST00000577307.1_1_17:33266566-33269658:-|nuORF	41.42661286455405	0.403525789677298	3				NaN	NaN	0	NaN	6315	4559	10872
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10880	32.582	NaN	3274.6	30	0	379.93	0.214				-1	 	0	62	470.7952629193319	939.5759729054638	2	470.79461669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	6316	4562	10879
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10881	32.586	NaN	8921.9	30	0	996.59	0.106	+			34506	RVFVVGVGMTK	11	50	398.2342856675019	1191.6810276027059	3	398.23431396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RVFVVGVGMTK_	ENSG00000116171|ENST00000371514|SCP2;ENST00000528311.5_1_1:53392996-53413692:+|nuORF;nc|ENSG00000116171|P22307-3|SCP2;nc|ENSG00000116171|P22307-7|SCP2;nc|ENSG00000116171|P22307-8|SCP2	56.55063890039881	0.3542454156878057	3				NaN	NaN	0	NaN	6317	4562	10879
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10882	32.588	NaN	2290.4	30	0	260.84	0.036	+			50668	YEEEMREL	8	67	549.7431009679894	1097.4716490027788	2	549.7434692382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YEEEMREL_	ENSG00000026025|ENST00000544301|VIM;ENST00000485947.1_1_10:17271421-17272784:+|nuORF	42.86426827375447	0.638539151166014	3				NaN	NaN	0	NaN	6318	4562	10879
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10887	32.602	NaN	21141	30	0	7533.2	0.214	+			5147	ATSVITIVK	9	73	466.2949263749204	930.5752998166408	2	466.2943420410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSVITIVK_	ENSG00000197063|ENST00000357736|MAFG	106.68306549817024	0.032382560583716295	3				NaN	NaN	0	NaN	6320	4565	10886
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10888	32.606	NaN	3000.4	30	0	167.1	0.035			+	13911	GRLDRSTDL	9	63	516.7766846744062	1031.5388164156122	2	516.776611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GRLDRSTDL_	REV__ENST00000371833.3_1_1:49224889-49227061:-|nuORF	41.42661286455405	0.403525789677298	3				NaN	NaN	0	NaN	6321	4565	10886
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10893	32.62	NaN	1753.1	30	0	190.64	0.214	+			48565	VTPYDLVR	8	61	481.76931680061784	961.5240806680357	2	481.76898193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTPYDLVR_	ENSG00000134668|ENST00000360482|SPOCD1;nc|ENSG00000134668|Q6ZMY3-2|SPOCD1;nc|ENSG00000134668|Q6ZMY3-3|SPOCD1;nc|ENSG00000134668|Q6ZMY3-4|SPOCD1	24.20275056022122	0.7724576178584145	3				NaN	NaN	0	NaN	6323	4568	10892
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10894	32.624	NaN	2126.5	30	0	192.17	0.106	+			50380	WYNISLVY	8	63	529.2699884988946	1056.525424064589	2	529.2695922851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WYNISLVY_	TMEM169|p.F191S|1|0.38|ENSG00000163449|chr2:216100220-216100220|T/C|missense_variant	60.29395666154354	0.49887135096048313	3				NaN	NaN	0	NaN	6324	4568	10892
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10895	32.625	NaN	1798.2	30	0	289.71	0.106	+			7323	DATIVVKSY	9	55	498.2744072015128	994.5342614698257	2	498.2735290527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DATIVVKSY_	ENSG00000130762|ENST00000378378|ARHGEF16	75.04331003522576	0.118981335847003	3				NaN	NaN	0	NaN	6325	4568	10892
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10896	32.627	NaN	750.57	30	0	53.44	0.033	+			29843	PLAQKPAL	8	37	419.2637295789792	836.5129062247585	2	419.26336669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PLAQKPAL_	ENSG00000109265|ENST00000682029|CRACD	13.775330524044264	0.789990904165365	3				NaN	NaN	0	NaN	6326	4568	10892
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10902	32.643	NaN	1683	30	0	208.3	0.214	+			32596	QYHAVKIP	8	54	478.271988511936	954.529424090672	2	478.271240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QYHAVKIP_	ENSG00000135424|ENST00000257879|ITGA7;nc|ENSG00000135424|Q13683-13|ITGA7;nc|ENSG00000135424|Q13683-3|ITGA7;nc|ENSG00000135424|Q13683-9|ITGA7;nc|ENSG00000135424|Q13683|ITGA7	30.503639358989545	0.7238069182250283	3				NaN	NaN	0	NaN	6329	4571	10901
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10903	32.647	NaN	3531.5	30	0	373.53	0.106	+			14354	GTAALGCLVK	10	72	495.2747897949319	NaN	0	495.27484130859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GTAALGC(Carbamidomethyl (C))LVK_	ENST00000390555.3_1_14:106135325-106136152:-|nuORF;nc|ENSG00000211896|P01857-1|IGHG1;nc|ENSG00000211896|P01857|IGHG1;nc|ENSG00000211897|P01860-1|IGHG3;nc|ENSG00000211897|P01860|IGHG3	95.81516180277367	0.03187299381579768	3				NaN	NaN	0	NaN	6330	4571	10901
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10904	32.649	NaN	1522.8	30	0	109.42	0.106			+	29711	PHGERLWA	8	50	483.25099040810727	964.4874278830146	2	483.2494201660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PHGERLWA_	REV__ENST00000476274.6_1_9:130635098-130647547:-|nuORF	38.80614096846853	0.6637206697844082	3				NaN	NaN	0	NaN	6331	4571	10901
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10905	32.65	NaN	1464.4	30	0	234.34	0.106	+			154	AAIEASQSL	9	53	445.235383129039	888.456213324878	2	445.2341613769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AAIEASQSL_	ENSG00000168297|ENST00000356151|PXK;nc|ENSG00000168297|Q7Z7A4-2|PXK;nc|ENSG00000168297|Q7Z7A4-4|PXK;nc|ENSG00000168297|Q7Z7A4-6|PXK	51.19269402634007	0.2889735674168909	3				NaN	NaN	0	NaN	6332	4571	10901
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10906	32.652	NaN	1641.4	30	0	140.03	0.037	+			28075	NAERGWLLLA	10	60	571.8173828125	NaN	0	571.8173828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NAERGWLLLA_	ENSG00000091536|ENST00000647165|MYO15A;MYO15A|p.E2245Kfs*8|1|0.44|ENSG00000091536|chr17:18148533-18148533|G/-|frameshift_variant;MYO15A|p.P2208Rfs*45|1|0.09|ENSG00000091536|chr17:18148138-18148138|C/-|frameshift_variant	35.61828744233558	0.3832230071539346	3				NaN	NaN	0	NaN	6333	4571	10901
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10912	32.667	NaN	3739.8	30	0	576.97	0.214	+			45328	TVSGIQVRY	9	64	511.78528239650586	1021.5560118598117	2	511.78546142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVSGIQVRY_	ENSG00000129354|ENST00000250244|AP1M2;nc|ENSG00000129354|Q9Y6Q5-2|AP1M2	127.46168284122857	0.016682644177004526	3				NaN	NaN	0	NaN	6336	4574	10911
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10913	32.67	NaN	4543.5	30	0	613.15	0.106			+	51269	YRLTTGTEF	9	67	544.2746802064938	1086.5348074797876	2	544.274658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YRLTTGTEF_	REV__CON__Q28065	34.172542307311794	0.4838870758800184	3				NaN	NaN	0	NaN	6337	4574	10911
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10914	32.672	NaN	3340.8	30	0	448.29	0.106	+			39808	STLESIYQR	9	71	548.7857152686496	1095.556877604099	2	548.785888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STLESIYQR_	ENSG00000166888|ENST00000300134|STAT6;ENST00000555641.1_1_12:57499966-57502061:-|nuORF;STAT6|p.G815Efs*27|3|0.31|ENSG00000166888|chr12:57096672-57096672|C/-|frameshift_variant	88.17693792209575	0.07000514020414955	3				NaN	NaN	0	NaN	6338	4574	10911
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10915	32.674	NaN	2677.9	30	0	215.85	0.106			+	-1	AQLGLVNAL	9	58	470.7774766606496	939.5404003880992	2	470.7765808105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))AQLGLVNAL_	REV__ENST00000480486.1_1_21:37758395-37770302:+|nuORF	44.116797842482775	0.37197099687881774	3				NaN	NaN	0	NaN	6339	4574	10911
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10916	32.676	NaN	3180.2	30	0	369.29	0.106	+			10800	FAKGGNLTL	9	58	460.7635052805586	919.5124576279172	2	460.763427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FAKGGNLTL_	ENSG00000035115|ENST00000356150|SH3YL1;ENST00000497051.5_1_2:233054-249752:-|nuORF;nc|ENSG00000035115|Q96HL8-2|SH3YL1;nc|ENSG00000035115|Q96HL8-3|SH3YL1;nc|ENSG00000035115|Q96HL8-4|SH3YL1	60.97194046774394	0.20551255781574032	3				NaN	NaN	0	NaN	6340	4574	10911
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10917	32.677	NaN	2572.9	30	0	232.84	0.106	+			27932	MVEARTLR	8	65	488.2725210558079	974.5304891784158	2	488.2711486816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MVEARTLR_	PPP2R5D|p.K13Rfs*94|2|0.35|ENSG00000112640|chr6:42989614-42989614|C/-|frameshift_variant	53.351449002276354	0.5676011784961348	3				NaN	NaN	0	NaN	6341	4574	10911
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10918	32.679	NaN	1582.8	30	0	112.46	0.034	+			21489	KNKPQVPV	8	49	455.2795827851581	908.5446126371162	2	455.27880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KNKPQVPV_	ENSG00000254093|ENST00000314787|PINX1	31.954861631926434	0.7126016770032289	3				NaN	NaN	0	NaN	6342	4574	10911
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10924	32.695	NaN	5846.6	30	0	1180.1	0.214			+	8019	DTNPNMPIV	9	69	500.74162545293007	999.4686979726602	2	500.7422180175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DTNPNMPIV_	REV__ENSG00000102024|ENST00000355899|PLS3;REV__nc|ENSG00000102024|P13797-2|PLS3;REV__nc|ENSG00000102024|P13797-3|PLS3	52.936696900407355	0.27249468807391813	3				NaN	NaN	0	NaN	6345	4577	10923
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10925	32.699	NaN	3734.2	30	0	339.17	0.106	+			34336	RTPNIDWL	8	69	507.7724024761547	1013.5302520191094	2	507.7723693847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RTPNIDWL_	ENST00000412493.1_1_Y:17659176-17661596:+|nuORF	45.9519527083369	0.6193794311207887	3				NaN	NaN	0	NaN	6346	4577	10923
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10926	32.701	NaN	3567.4	30	0	205.25	0.106	+			8831	EELQGVRSL	9	64	515.7808849694047	1029.5472170056094	2	515.7800903320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EELQGVRSL_	ENSG00000148843|ENST00000369797|PDCD11	60.11826168202944	0.21262886028301267	3				NaN	NaN	0	NaN	6347	4577	10923
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10927	32.703	NaN	2859.8	30	0	1321.5	0.106			+	-1	SVKESLVMEKK	11	43	431.9065873671887	1292.6979327017661	3	432.2406921386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_SVKESLVM(Oxidation (M))EKK_	REV__ENSG00000102158|ENST00000618282|MAGT1;REV__ENST00000476168.1_1_X:77112151-77150907:-|nuORF;REV__nc|ENSG00000102158|Q9H0U3-2|MAGT1	24.231819034082204	0.7356191775841856	3				NaN	NaN	0	NaN	6348	4577	10923
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10928	32.704	NaN	1822.3	30	0	86.578	0.106			+	50954	YIENTRVY	8	68	529.2699884988946	1056.525424064589	2	529.2697143554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YIENTRVY_	REV__ENSG00000180376|ENST00000394672|CCDC66;REV__nc|ENSG00000180376|A2RUB6-3|CCDC66	71.37791200682192	0.3954169775488141	3				NaN	NaN	0	NaN	6349	4577	10923
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10929	32.706	NaN	2833	30	0	308.58	0.034				-1	GALLPAIHE	9	59	481.76931680061784	961.5240806680357	2	481.7721252441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))GALLPAIHE_	ENSG00000130702|ENST00000252999|LAMA5;LAMA5|p.A3459Qfs*25|1|0.42|ENSG00000130702|chr20:62310736-62310736|C/-|frameshift_variant;LAMA5|p.L2192P|1|0.19|ENSG00000130702|chr20:62320812-62320812|A/G|missense_variant;LAMA5|p.P3242Rfs*47|1|0.41|ENSG00000130702|chr20:62311700-62311700|C/-|frameshift_variant	52.29916861842294	0.2778091507991977	3				NaN	NaN	0	NaN	6350	4577	10923
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10935	32.721	NaN	8025.1	30	0	863.22	0.214	+			12996	GEVDPKVAL	9	74	464.260959083342	926.507365233484	2	464.26043701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEVDPKVAL_	ENSG00000099795|ENST00000215565|NDUFB7;ENST00000593353.5_1_19:14676947-14682853:-|nuORF	87.69643885390035	0.07135982304947239	3				NaN	NaN	0	NaN	6353	4580	10934
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10936	32.724	NaN	16423	30	0	2325.5	0.106	+			50461	YAEVGRVL	8	71	453.75594752067025	905.4973421081405	2	453.7554931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YAEVGRVL_	ANKRD17|p.L2249Yfs*84|1|0.34|ENSG00000132466|chr4:73090884-73090884|G/-|frameshift_variant;ENSG00000131503|ENST00000360839|ANKHD1;ENSG00000132466|ENST00000358602|ANKRD17;ENST00000514252.1_1_4:73978989-74017230:-|nuORF;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1;nc|ENSG00000132466|O75179-2|ANKRD17;nc|ENSG00000132466|O75179-6|ANKRD17;nc|ENSG00000132466|O75179-7|ANKRD17	96.19043198914106	0.25873003980794995	3				NaN	NaN	0	NaN	6354	4580	10934
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10937	32.726	NaN	3984.8	30	0	604.38	0.106	+			40730	SVCLVEGAVG	10	61	467.23853771694763	NaN	0	467.238525390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVCLVEGAVG_	ENST00000156825.5_1_19:1576713-1576977:-|nuORF	44.116797842482775	0.3427969396372342	3				NaN	NaN	0	NaN	6355	4580	10934
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10938	32.728	NaN	4370.3	30	0	2034.5	0.106				-1	RSVLCGHVR	9	42	361.86623872231894	1082.5768867671568	3	361.8656311035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_RSVLC(Carbamidomethyl (C))GHVR_	ENSG00000167716|ENST00000409644|WDR81;nc|ENSG00000167716|Q562E7-4|WDR81;WDR81|p.F1429Sfs*15|1|0.43|ENSG00000167716|chr17:1732449-1732449|T/-|frameshift_variant;WDR81|p.H1752Tfs*33|1|0.25|ENSG00000167716|chr17:1735641-1735641|C/-|frameshift_variant	23.52269567125451	0.5834155526130771	3				NaN	NaN	0	NaN	6356	4580	10934
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10939	32.73	NaN	2377.5	30	0	524.28	0.106	+			8374	EALSPHDVK	9	64	498.2620454010437	994.5095378688874	2	498.2610168457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EALSPHDVK_	MBD4|p.P430Hfs*61|1|0.1|ENSG00000129071|chr3:129433972-129433972|G/-|frameshift_variant	39.252832667884924	0.4290233611298554	3				NaN	NaN	0	NaN	6357	4580	10934
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10940	32.732	NaN	2098.8	30	0	198.88	0.106			+	24583	LGPKVSDFV	9	56	481.27243886596125	NaN	0	481.2723388671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LGPKVSDFV_	REV__ENSG00000187097|ENST00000334696|ENTPD5	45.9519527083369	0.2345902329052062	3				NaN	NaN	0	NaN	6358	4580	10934
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10941	32.733	NaN	3189.9	30	0	189.86	0.034			+	36602	SGDDIIIIE	9	67	487.7563093976756	NaN	0	487.7561950683594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SGDDIIIIE_	REV__ENSG00000000419|ENST00000371588|DPM1;REV__ENST00000466152.5_1_20:49557422-49575060:-|nuORF	51.33545320467046	0.19748963086191895	3				NaN	NaN	0	NaN	6359	4580	10934
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10948	32.751	NaN	14366	30	0	1511	0.214	+			12616	GEIDGNKVTL	10	72	523.2800181545026	1044.5454833758051	2	523.2808837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEIDGNKVTL_	ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232319904-232323320:-|nuORF	86.88156770896713	0.14892753630261096	3				NaN	NaN	0	NaN	6363	4583	10947
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10949	32.755	NaN	5390.7	30	0	1049.5	0.106			+	24243	LETGKVTL	8	50	430.75818642525525	859.5018199173105	2	430.7577209472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LETGKVTL_	REV__CDH23|p.F3223Lfs*43|1|0.34|ENSG00000107736|chr10:71812773-71812773|T/-|frameshift_variant;REV__ENSG00000107736|ENST00000224721|CDH23;REV__nc|ENSG00000107736|Q9H251-2|CDH23;REV__nc|ENSG00000107736|Q9H251-3|CDH23;REV__nc|ENSG00000107736|Q9H251-4|CDH23;REV__nc|ENSG00000107736|Q9H251-5|CDH23;REV__nc|ENSG00000107736|Q9H251-6|CDH23;REV__nc|ENSG00000107736|Q9H251-8|CDH23	79.45101966838831	0.3281480470254892	3				NaN	NaN	0	NaN	6364	4583	10947
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10950	32.757	NaN	3002.9	30	0	370.19	0.106	+			23816	LCQSYSGLS	9	71	507.732004973714	1013.4494570142281	2	507.73199462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LC(Carbamidomethyl (C))QSYSGLS_	ENST00000398637.9_1_12:46581896-46582007:-|nuORF	56.72105179125745	0.24094814563026265	3				NaN	NaN	0	NaN	6365	4583	10947
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10951	32.759	NaN	2484.8	30	0	181.15	0.106			+	51501	YVPGAPSPLG	10	61	479.2539433504517	956.4933337677035	2	479.25347900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YVPGAPSPLG_	REV__ENST00000357166.10_1_X:128976053-128977729:-|nuORF;REV__ENST00000371064.7_1_X:128976053-128977321:-|nuORF	29.14955571784316	0.6417842315402807	3				NaN	NaN	0	NaN	6366	4583	10947
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10952	32.76	NaN	959.01	30	0	81.05	0.106	+			24051	LEGTKALL	8	50	422.7606506347656	NaN	0	422.7606506347656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LEGTKALL_	CARD10|p.K896Rfs*9|1|0.27|ENSG00000100065|chr22:37492501-37492501|G/-|frameshift_variant;CARD10|p.S527Vfs*31|2|0.24|ENSG00000100065|chr22:37504242-37504242|G/-|frameshift_variant;ENSG00000100065|ENST00000251973|CARD10;nc|ENSG00000100065|Q9BWT7-2|CARD10	44.116797842482775	1.7418937515398478	3				NaN	NaN	0	NaN	6367	4583	10947
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10953	32.762	NaN	764.64	30	0	41.936	0.033	+			30311	PTPHTEEA	8	47	441.2033386230469	NaN	0	441.2033386230469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PTPHTEEA_	TP53I13|p.R306H|1|0.18|ENSG00000167543|chr17:29572545-29572545|G/A|missense_variant	25.450171626174864	1.7418937515398478	3				NaN	NaN	0	NaN	6368	4583	10947
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10958	32.776	NaN	2816.5	30	0	228.96	0.214	+			13023	GEVLISRV	8	54	436.76350878288326	NaN	0	436.7633056640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEVLISRV_	AP2M1|p.I386Hfs*6|1|0.17|ENSG00000161203|chr3:184182844-184182845|-/C|frameshift_variant;ENSG00000161203|ENST00000292807|AP2M1;ENST00000466598.5_1_3:183894781-183896942:+|nuORF;ENST00000472560.5_1_3:183894781-183898834:+|nuORF;ENST00000484469.5_1_3:183894781-183895400:+|nuORF;ENST00000487958.5_1_3:183894781-183898060:+|nuORF;nc|ENSG00000161203|Q96CW1-2|AP2M1	60.11826168202944	1.7418937515398478	3				NaN	NaN	0	NaN	6370	4586	10957
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10959	32.78	NaN	2784.7	30	0	270	0.106				-1	SECGKAFSL	9	62	499.7341838981097	997.4538148630194	2	499.7339782714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SEC(Carbamidomethyl (C))GKAFSL_	ENSG00000106261|ENST00000324306|ZKSCAN1;ENSG00000186230|ENST00000334181|ZNF749;ENSG00000186272|ENST00000307658|ZNF17;ENSG00000186812|ENST00000330501|ZNF397;ENSG00000198393|ENST00000328654|ZNF26;ENST00000602050.1_1_19:57930944-57932846:+|nuORF;nc|ENSG00000186272|P17021-3|ZNF17;nc|ENSG00000186272|P17021|ZNF17;ZNF852|p.G393S|1|0.24|ENSG00000178917|chr3:44499600-44499600|C/T|missense_variant	75.04331003522576	0.118981335847003	3				NaN	NaN	0	NaN	6371	4586	10957
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10960	32.782	NaN	1469.4	30	0	158.6	0.106	+			50419	YAATIASKL	9	54	469.27153195848484	936.5285109837697	2	469.2705383300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YAATIASKL_	ENSG00000102554|ENST00000377687|KLF5;nc|ENSG00000102554|Q13887-2|KLF5;nc|ENSG00000102554|Q13887-4|KLF5	85.16082228582465	0.07850854922700509	3				NaN	NaN	0	NaN	6372	4586	10957
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10961	32.784	NaN	2563.1	30	0	1096.7	0.106			+	24394	LGAAAAATPLV	11	54	477.7850317529581	953.5555105727162	2	477.7842102050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LGAAAAATPLV_	REV__ENSG00000139910|ENST00000539517|NOVA1;REV__nc|ENSG00000139910|P51513-5|NOVA1	27.882242232435846	0.6973292152807183	3				NaN	NaN	0	NaN	6373	4586	10957
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10962	32.785	NaN	1514	30	0	121.92	0.106			+	-1	GLCLADHFS	9	55	510.2345943050203	1018.4546356768407	2	510.23406982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_GLC(Carbamidomethyl (C))LADHFS_	REV__VN1R2|p.V271A|1|0.05|ENSG00000196131|chr19:53259187-53259187|T/C|missense_variant	38.80614096846853	0.43426287593479557	3				NaN	NaN	0	NaN	6374	4586	10957
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10963	32.787	NaN	1404	30	0	99.366	0.106	+			17595	IEESRQLL	8	59	494.2771145001941	NaN	0	494.2771301269531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IEESRQLL_	ENSG00000020577|ENST00000554335|SAMD4A;ENSG00000179134|ENST00000610417|SAMD4B;ENST00000555112.1_1_14:55034634-55169324:+|nuORF;ENST00000557013.1_1_14:55168817-55201659:+|nuORF;nc|ENSG00000020577|Q9UPU9-2|SAMD4A;nc|ENSG00000020577|Q9UPU9-3|SAMD4A	60.97194046774394	1.7418937515398478	3				NaN	NaN	0	NaN	6375	4586	10957
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10964	32.789	NaN	1674.1	30	0	120.34	0.035			+	49612	VYGTGGSILY	10	59	515.2662477514061	1028.5179425696122	2	515.265869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VYGTGGSILY_	REV__ENSG00000106348|ENST00000338791|IMPDH1;REV__IMPDH1|p.A247Gfs*7|1|0.06|ENSG00000106348|chr7:128398490-128398491|-/C|frameshift_variant;REV__nc|ENSG00000106348|P20839-2|IMPDH1;REV__nc|ENSG00000106348|P20839-3|IMPDH1;REV__nc|ENSG00000106348|P20839-4|IMPDH1;REV__nc|ENSG00000106348|P20839-5|IMPDH1;REV__nc|ENSG00000106348|P20839|IMPDH1	27.882242232435846	0.6521336255503853	3				NaN	NaN	0	NaN	6376	4586	10957
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10970	32.805	NaN	3707.6	30	0	947.42	0.214				-1	AYLCGKPDV	9	63	511.7505785046908	1021.4866040761816	2	511.7499694824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_AYLC(Carbamidomethyl (C))GKPDV_	ENSG00000128309|ENST00000429360|MPST;ENSG00000128311|ENST00000249042|TST;nc|ENSG00000128309|P25325|MPST;TST|p.A270T|1|0.23|ENSG00000128311|chr22:37011113-37011113|C/T|missense_variant	45.9519527083369	0.35044536499095585	3				NaN	NaN	0	NaN	6379	4589	10969
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10971	32.809	NaN	2234.6	30	0	423.99	0.106			+	46430	VERPFASL	8	56	459.755956662482	917.497360391764	2	459.7555847167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VERPFASL_	REV__ADGRA2|p.L985Pfs*2|1|0.18|ENSG00000020181|chr8:37841292-37841292|T/-|frameshift_variant;REV__ENSG00000020181|ENST00000412232|ADGRA2;REV__nc|ENSG00000020181|Q96PE1-2|ADGRA2	45.9519527083369	0.6193794311207887	3				NaN	NaN	0	NaN	6380	4589	10969
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10972	32.811	NaN	1313.8	30	0	212.94	0.106	+			43341	TGATLYLLR	9	29	336.53444935637697	1006.581518669331	3	336.534423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TGATLYLLR_	ENSG00000189043|ENST00000339600|NDUFA4;ENST00000486007.1_1_7:10977674-10979684:-|nuORF;NDUFA4|p.A37T|1|0.4|ENSG00000189043|chr7:10938830-10938830|C/T|missense_variant	25.450171626174864	0.5654022654467333	3				NaN	NaN	0	NaN	6381	4589	10969
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10973	32.812	NaN	1546.6	30	0	111.06	0.106			+	26342	LSYNLSINI	9	58	518.7879638671875	NaN	0	518.7879638671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSYNLSINI_	REV__ENSG00000077943|ENST00000378076|ITGA8	30.317721548370564	0.32449924987115025	3				NaN	NaN	0	NaN	6382	4589	10969
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10974	32.814	NaN	2437.8	30	0	684.94	0.106			+	-1	LMNALNLAK	9	57	502.2839509041894	1002.5533488751788	2	502.2832946777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_LM(Oxidation (M))NALNLAK_	REV__ENSG00000164296|ENST00000296736|TIGD6	53.351449002276354	0.2690372970092375	3				NaN	NaN	0	NaN	6383	4589	10969
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10975	32.816	NaN	1432.1	30	0	124.69	0.106	+			27916	MTWRLAAT	8	52	475.25040378918277	948.4862546451656	2	475.249267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MTWRLAAT_	ENST00000370490.1_1_X:144903534-144903729:+|nuORF	44.116797842482775	0.6307669463330267	3				NaN	NaN	0	NaN	6384	4589	10969
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10976	32.818	NaN	1356.4	30	0	189.96	0.037			+	694	AEALTGLA	8	40	373.20876613323554	NaN	0	373.20843505859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AEALTGLA_	REV__ENSG00000160182|ENST00000291527|TFF1	35.200714571348534	1.7418937515398478	3				NaN	NaN	0	NaN	6385	4589	10969
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10984	32.836	NaN	2230.5	30	0	154.18	0.214	+			9348	EIQFYVQQ	8	69	527.7642234372089	1053.5138939412177	2	527.76416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EIQFYVQQ_	ENSG00000120915|ENST00000521400|EPHX2;EPHX2|p.R516Gfs*19|1|0.17|ENSG00000120915|chr8:27544198-27544198|A/-|frameshift_variant;nc|ENSG00000120915|P34913-2|EPHX2;nc|ENSG00000120915|P34913-3|EPHX2	37.15910966729921	0.6739408393984688	3				NaN	NaN	0	NaN	6390	4592	10983
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10985	32.839	NaN	3446.4	30	0	1582	0.106	+			18035	IIPHELIRT	9	36	364.5572502582259	NaN	0	364.55706787109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IIPHELIRT_	ENSG00000107882|ENST00000369902|SUFU;nc|ENSG00000107882|Q9UMX1-2|SUFU;nc|ENSG00000107882|Q9UMX1-3|SUFU	34.172542307311794	0.30503706118289736	3				NaN	NaN	0	NaN	6391	4592	10983
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10986	32.841	NaN	3025.8	30	0	356.88	0.106				-1	HHCNQAWVT	9	62	576.7517539148573	1151.4889548965145	2	577.2530517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_HHC(Carbamidomethyl (C))NQAWVT_	AluSz6_dup36815|chr15:60362892-60363058:+|1.1099680225515125|0.0012375329650786|9.81|477.0|5|2|sense	57.81127852772723	0.2318599694398087	3				NaN	NaN	0	NaN	6392	4592	10983
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10987	32.843	NaN	1488.7	30	0	165.65	0.106	+			28157	NALREVYV	8	59	482.2666710317987	NaN	0	482.26678466796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NALREVYV_	WEE1|p.A349V|1|0.33|ENSG00000166483|chr11:9577168-9577168|C/T|missense_variant	42.47446043378293	1.7418937515398478	3				NaN	NaN	0	NaN	6393	4592	10983
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10988	32.845	NaN	1555.7	30	0	142.64	0.04			+	-1	NMRHHMPKPGF	11	65	684.3279430490877	1366.6413331649753	2	684.3264770507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_NMRHHM(Oxidation (M))PKPGF_	REV__ENST00000547268.1_1_12:108147850-108154343:-|nuORF	25.57405402267927	0.7215402271931856	3				NaN	NaN	0	NaN	6394	4592	10983
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10995	32.861	NaN	13347	30	0	2496.8	0.214	+			6286	AVSTFAMVK	9	74	477.2601010688284	952.5056492044569	2	477.2597961425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVSTFAMVK_	ENSG00000172893|ENST00000355527|DHCR7;ENST00000534701.1_1_11:71149825-71152361:-|nuORF	93.1432384553994	0.056003526918089595	3				NaN	NaN	0	NaN	6398	4595	10994
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10996	32.865	NaN	5118.5	30	0	623.61	0.106	+			42853	TEFTNKNML	9	68	549.267172435449	1096.5197919376978	2	549.2678833007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEFTNKNML_	ENSG00000167600|ENST00000310054|CYP2S1;nc|ENSG00000167600|Q96SQ9-2|CYP2S1	69.6276240434122	0.14239879520340665	3				NaN	NaN	0	NaN	6399	4595	10994
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10997	32.867	NaN	7999.9	30	0	1490.3	0.106	+			39503	STFNQVVLK	9	69	518.2956486330432	1034.5767443328864	2	518.2957153320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STFNQVVLK_	ENSG00000063177|ENST00000549920|RPL18;ENST00000478088.1_1_16:76269257-76269449:-|nuORF;ENST00000547892.1_1_19:49120227-49120731:-|nuORF;ENST00000552347.5_1_19:49120227-49122400:-|nuORF;ENST00000552705.5_1_19:49119841-49122400:-|nuORF;ENST00000552851.1_1_19:49119841-49122400:-|nuORF;nc|ENSG00000063177|Q07020-2|RPL18	167.22876102047192	0.0032399547248545047	3				NaN	NaN	0	NaN	6400	4595	10994
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10998	32.869	NaN	2652.5	30	0	381.13	0.106			+	-1	VIIWYCTN	8	65	534.7612021093767	1067.5078512855532	2	534.7614135742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_VIIWYC(Carbamidomethyl (C))TN_	REV__ENST00000315717.9_1_2:219118663-219118816:+|nuORF	28.2542754592877	0.7411748056684583	3				NaN	NaN	0	NaN	6401	4595	10994
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10999	32.871	NaN	1674.3	30	0	229.5	0.106	+			26885	LWPWKQTQI	9	61	600.33064023061	1198.64672752802	2	600.3306884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LWPWKQTQI_	ENST00000311106.7_1_5:95735789-95743960:-|nuORF	41.42661286455405	0.403525789677298	3				NaN	NaN	0	NaN	6402	4595	10994
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11000	32.872	NaN	1589.6	30	0	312.89	0.106	+			2324	AMLEESKLM	9	57	526.2615965479733	1050.5086401627466	2	526.261474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AMLEESKLM_	tr|U7SYY3|U7SYY3_FUSNUHistidinekinasedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00807PE=4SV=1	42.396135135203025	0.392153681582562	3				NaN	NaN	0	NaN	6403	4595	10994
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11001	32.874	NaN	1502.8	30	0	109.94	0.038			+	-1	EPKGGGLCLRL	11	46	400.55573069831735	NaN	0	400.5558776855469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_EPKGGGLC(Carbamidomethyl (C))LRL_	REV__ENST00000484662.1_1_1:78445029-78445155:+|nuORF	36.31764250033197	0.4035636655321173	3				NaN	NaN	0	NaN	6404	4595	10994
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11005	32.888	NaN	136320	30	0	25956	0.173	+			44268	TSALPIIQK	9	93	485.8005595109441	969.5865660886882	2	485.79998779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSALPIIQK_	ENSG00000147872|ENST00000276914|PLIN2;ENST00000472715.1_1_9:19126103-19127487:-|nuORF;ENST00000475923.1_1_9:19126103-19126313:-|nuORF;PLIN2|p.V348*|1|0.15|ENSG00000147872|chr9:19116520-19116520|C/-|frameshift_variant	205.58201149802446	9.704336011985736E-06	3				NaN	NaN	0	NaN	6405	4598	11004
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11006	32.891	NaN	49081	30	0	19070	0.106	+			14991	GTMTGMLYK	9	86	501.24369356261406	1000.4728341920281	2	501.2431335449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTMTGMLYK_	ENSG00000178440|ENST00000651763|TIMM23B-AGAP6;ENSG00000204152|ENST00000651259|TIMM23B;ENSG00000265354|ENST00000580018|TIMM23;nc|ENSG00000204152|Q5SRD1-2|TIMM23B	158.07458414430337	0.004987072822166904	3				NaN	NaN	0	NaN	6406	4598	11004
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11007	32.893	NaN	2730.2	30	0	236.82	0.106	+			17328	IAGVTHLLP	9	51	460.7819135545235	919.549274175847	2	460.7813415527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IAGVTHLLP_	CPEB2|p.C544Lfs*12|1|0.1|ENSG00000137449|chr4:15066233-15066234|-/T|frameshift_variant;CPEB2|p.C544Vfs*31|5|0.34|ENSG00000137449|chr4:15066234-15066234|T/-|frameshift_variant;ENSG00000137449|ENST00000538197|CPEB2;nc|ENSG00000137449|Q7Z5Q1-8|CPEB2	42.47446043378293	0.39123495718708534	3				NaN	NaN	0	NaN	6407	4598	11004
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11008	32.895	NaN	1209.1	30	0	276.82	0.106			+	30414	PWLLQNQP	8	34	332.51528042956835	994.5240118889051	3	332.5155334472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PWLLQNQP_	REV__ENST00000467808.5_1_X:100878865-100879856:+|nuORF	21.70233525837049	0.7917639344264583	3				NaN	NaN	0	NaN	6408	4598	11004
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11009	32.896	NaN	1581.7	30	0	136.41	0.106			+	-1	MRRYSQVTF	9	59	602.3002615622373	NaN	0	602.3006591796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_M(Oxidation (M))RRYSQVTF_	REV__ENST00000269141.7_1_18:25593870-25727729:-|nuORF	24.519189625965996	0.35377483217337163	3				NaN	NaN	0	NaN	6409	4598	11004
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11010	32.898	NaN	2361.3	30	0	533.63	0.106	+			29704	PHDISNVLK	9	65	511.78528239650586	1021.5560118598117	2	511.2828063964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PHDISNVLK_	ENSG00000180448|ENST00000313093|ARHGAP45;ENST00000587602.5_1_19:1073185-1086002:+|nuORF;nc|ENSG00000180448|Q92619-2|ARHGAP45	37.15910966729921	0.4535818937225704	3				NaN	NaN	0	NaN	6410	4598	11004
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11011	32.9	NaN	935.71	30	0	114.19	0.033			+	50482	YAKAIGRI	8	43	446.2743904603895	NaN	0	446.274658203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YAKAIGRI_	REV__tr|U7T206|U7T206_FUSNUCysteinedesulfuraseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00795PE=3SV=1	31.954861631926434	1.7418937515398478	3				NaN	NaN	0	NaN	6411	4598	11004
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11019	32.918	NaN	3177.5	30	0	412.55	0.214	+			7898	DRVSLCHPG	9	53	492.238116172396	982.4616794115921	2	492.2375793457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DRVSLCHPG_	AluJb_dup103497|chr16:68836460-68836742:-|1.236851903517141|0.3217908410714272|1.94|479.0|11|1|anti-sense;AluSz6_dup43939|chr19:17810209-17810427:+|2.2506602683828447|0.1577247637628512|3.83|482.0|14|3|anti-sense;ENST00000501817.6_1_11:58907597-58910200:-|nuORF;ENST00000531708.1_1_11:58907597-58910423:-|nuORF	55.50420428727701	0.2510918378945873	3				NaN	NaN	0	NaN	6416	4601	11018
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11020	32.922	NaN	2860.4	30	0	590.32	0.106			+	11365	FLHGRSTT	8	51	459.7424712471025	917.470389561005	2	459.7420959472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FLHGRSTT_	REV__ENSG00000174514|ENST00000367147|MFSD4A	38.80614096846853	0.6637206697844082	3				NaN	NaN	0	NaN	6417	4601	11018
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11021	32.924	NaN	1686.5	30	0	713.15	0.106	+			35482	SATGHPPPRI	10	33	344.85631629297296	NaN	0	344.8565673828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SATGHPPPRI_	ENSG00000130508|ENST00000252804|PXDN;ENST00000478155.5_1_2:1668625-1670220:-|nuORF;nc|ENSG00000130508|Q92626-2|PXDN;PXDN|p.C857Afs*5|2|0.33|ENSG00000130508|chr2:1649212-1649212|G/-|frameshift_variant;PXDN|p.E1339Lfs*66|1|0.26|ENSG00000130508|chr2:1639361-1639362|-/AG|frameshift_variant;PXDN|p.G470Rfs*19|1|0.14|ENSG00000130508|chr2:1664962-1664963|-/T|frameshift_variant;PXDN|p.N1190Mfs*12|1|0.22|ENSG00000130508|chr2:1648211-1648211|T/-|frameshift_variant;PXDN|p.N1194Tfs*8|1|0.25|ENSG00000130508|chr2:1648199-1648199|T/-|frameshift_variant;PXDN|p.N865Mfs*25|3|0.42|ENSG00000130508|chr2:1649188-1649188|G/-|frameshift_variant;PXDN|p.R1242Pfs*22|1|0.07|ENSG00000130508|chr2:1644636-1644637|-/AG|frameshift_variant	27.882242232435846	0.4086243523356342	3				NaN	NaN	0	NaN	6418	4601	11018
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11022	32.925	NaN	578.28	30	0	146.79	0.106			+	-1	SVIAMLGLKT	10	31	350.2068152110817	NaN	0	350.20654296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_SVIAM(Oxidation (M))LGLKT_	REV__tr|U7T203|U7T203_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00417PE=4SV=1	16.006774744331256	0.4201028297492154	3				NaN	NaN	0	NaN	6419	4601	11018
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11023	32.927	NaN	1845.7	30	0	203.32	0.106			+	28464	NFTAKLAPED	10	57	553.2816273501227	NaN	0	553.2811889648438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NFTAKLAPED_	REV__ENSG00000172901|ENST00000357872|LVRN;REV__LVRN|p.N383Tfs*4|1|0.1|ENSG00000172901|chr5:115992162-115992162|A/-|frameshift_variant;REV__LVRN|p.N619Mfs*7|1|0.07|ENSG00000172901|chr5:116002865-116002865|A/-|frameshift_variant;REV__LVRN|p.S464Lfs*15|1|0.19|ENSG00000172901|chr5:115999771-115999771|T/-|frameshift_variant;REV__nc|ENSG00000172901|Q6Q4G3-2|LVRN	29.170058357718403	0.40439580130713204	3				NaN	NaN	0	NaN	6420	4601	11018
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11024	32.929	NaN	1529.6	30	0	368.96	0.038	+			31076	QFEELVRPF	9	33	388.8723845390109	1163.5953242172327	3	388.8719177246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QFEELVRPF_	ENSG00000161847|ENST00000617231|RAVER1;ENST00000592208.5_1_19:10433104-10439782:-|nuORF;nc|ENSG00000161847|Q8IY67-2|RAVER1;nc|ENSG00000161847|Q8IY67|RAVER1;RAVER1|p.G303Afs*232|1|0.29|ENSG00000161847|chr19:10323417-10323417|G/-|frameshift_variant;RAVER1|p.K358Sfs*177|2|0.26|ENSG00000161847|chr19:10323152-10323152|C/-|frameshift_variant;RAVER1|p.P366Qfs*169|1|0.32|ENSG00000161847|chr19:10322721-10322721|G/-|frameshift_variant	27.882242232435846	0.5426732730940306	3				NaN	NaN	0	NaN	6421	4601	11018
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11025	32.93	NaN	1516.5	30	0	165.59	0.139			+	15179	GTSISFHVL	9	54	480.7616724007003	959.5087918682007	2	480.76104736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GTSISFHVL_	REV__ENST00000511987.5_1_17:49109002-49124111:-|nuORF;REV__nc|ENSG00000008294|O60271-9|SPAG9	30.503639358989545	0.5181749237905803	3				NaN	NaN	0	NaN	6422	4601	11018
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11031	32.947	NaN	2783.3	30	0	194.05	0.214	+			43106	TERDLREVF	9	70	582.8045901035582	1163.5946272739163	2	582.8041381835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TERDLREVF_	ENSG00000136527|ENST00000453386|TRA2B;ENSG00000164548|ENST00000297071|TRA2A;ENST00000494255.5_1_7:23547037-23556014:-|nuORF;nc|ENSG00000136527|P62995-3|TRA2B;nc|ENSG00000164548|Q13595-2|TRA2A;nc|ENSG00000164548|Q13595-3|TRA2A;nc|ENSG00000164548|Q13595-4|TRA2A	51.52775601994872	0.28504342437107444	3				NaN	NaN	0	NaN	6425	4604	11030
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11032	32.951	NaN	2211.4	30	0	221.62	0.106	+			17727	IENNKAVVY	9	60	525.2855164662436	NaN	0	525.2847900390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IENNKAVVY_	tr|U7STZ3|U7STZ3_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01040PE=4SV=1	69.6276240434122	0.10825701912424071	3				NaN	NaN	0	NaN	6426	4604	11030
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11033	32.953	NaN	1348.2	30	0	520.66	0.036			+	50335	WVAVRPVLD	9	26	352.206370696011	1053.597282688233	3	352.2062683105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_WVAVRPVLD_	REV__nc|ENSG00000143641|Q10471-2|GALNT2	12.959181472943097	0.6112419832031292	3				NaN	NaN	0	NaN	6427	4604	11030
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11038	32.967	NaN	13069	30	0	2139.4	0.214	+			11404	FLPPQQLEA	9	77	521.782456993736	1041.550361054272	2	521.7825317382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FLPPQQLEA_	ENSG00000168014|ENST00000334126|C2CD3;ENST00000542452.1_1_11:73727738-73744892:-|nuORF	58.22992032128504	0.22837015374068087	3				NaN	NaN	0	NaN	6429	4607	11037
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11039	32.971	NaN	11515	30	0	2515	0.106			+	50109	WGSIPVSPVT	10	72	521.782456993736	1041.550361054272	2	522.2841186523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WGSIPVSPVT_	REV__EEF1A2|p.F190S|1|0.12|ENSG00000101210|chr20:63494857-63494857|A/G|missense_variant	46.45678178249821	0.4896490706773647	3				NaN	NaN	0	NaN	6430	4607	11037
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11040	32.973	NaN	2486.9	30	0	348.27	0.106			+	39193	SSYVSSTL	8	59	422.2096419100081	842.4047308868162	2	422.2090148925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSYVSSTL_	REV__ENSG00000049246|ENST00000377532|PER3;REV__nc|ENSG00000049246|P56645|PER3	47.91560031466742	0.6071945918984287	3				NaN	NaN	0	NaN	6431	4607	11037
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11041	32.974	NaN	1590.8	30	0	98.295	0.106	+			33910	RRSKWDQPA	9	61	572.3045649298217	1142.5945769264433	2	572.3048706054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RRSKWDQPA_	ENSG00000132680|ENST00000368321|KHDC4;ENST00000466713.1_1_1:155896424-155904164:-|nuORF;ENST00000491599.1_2_1:155902488-155904164:-|nuORF;nc|ENSG00000132680|Q7Z7F0-2|KHDC4;nc|ENSG00000132680|Q7Z7F0-3|KHDC4;nc|ENSG00000132680|Q7Z7F0-4|KHDC4	26.69291269510374	0.5537881896960711	3				NaN	NaN	0	NaN	6432	4607	11037
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11042	32.976	NaN	3257.9	30	0	465.39	0.106				-1	 	0	56	471.75627265166816	941.4979923701363	2	471.75555419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	6433	4607	11037
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11043	32.978	NaN	1683.1	30	0	161.76	0.106				-1	KLRNLCLDWL	10	64	665.8679070176812	NaN	0	665.8681640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_KLRNLC(Carbamidomethyl (C))LDWL_	ENSG00000198300|ENST00000326441|PEG3;nc|ENSG00000198300|Q9GZU2-3|PEG3;PEG3|p.A261Cfs*2|1|0.44|ENSG00000198300|chr19:56817827-56817828|-/A|frameshift_variant;PEG3|p.T824Nfs*10|1|0.16|ENSG00000198300|chr19:56815956-56815971|TCCCTTCCTTCAGAGG/-|frameshift_variant	20.94693142431847	0.4201028297492154	3				NaN	NaN	0	NaN	6434	4607	11037
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11044	32.98	NaN	1830.2	30	0	88.192	0.037			+	13323	GKLFDTFEPA	10	56	562.7868937458716	NaN	0	562.7869262695312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GKLFDTFEPA_	REV__L1PA5_dup2765|chr4:69723015-69726028:+|1.903650506224423|0.171219590839865|3.47|472.0|150|2|anti-sense	47.657333605630114	0.3204131577145918	3				NaN	NaN	0	NaN	6435	4607	11037
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11049	32.994	NaN	3765.7	30	0	372.27	0.214	+			16840	HPEDRGWL	8	62	505.24586436493723	1008.4771757966745	2	505.2455139160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HPEDRGWL_	ENSG00000127580|ENST00000293883|WDR24	85.35947970620816	0.2915182781752196	3				NaN	NaN	0	NaN	6437	4610	11048
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11050	32.998	NaN	3245.4	30	0	1409.3	0.106	+			37339	SLELRRYF	8	42	361.8698266354269	1082.5876505064807	3	361.8695373535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLELRRYF_	ENSG00000147896|ENST00000276943|IFNK	38.80614096846853	0.6637206697844082	3				NaN	NaN	0	NaN	6438	4610	11048
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11051	33	NaN	2026.7	30	0	333.65	0.106	+			17010	HPTMTAAL	8	44	421.2159895648511	840.4174261965022	2	421.21533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HPTMTAAL_	ENSG00000142185|ENST00000397928|TRPM2;nc|ENSG00000142185|O94759-2|TRPM2;nc|ENSG00000142185|O94759-3|TRPM2;TRPM2|p.A785Rfs*17|1|0.49|ENSG00000142185|chr21:44401707-44401707|C/-|frameshift_variant;TRPM2|p.V508Cfs*3|1|0.06|ENSG00000142185|chr21:44391350-44391350|G/-|frameshift_variant	44.53106598305862	0.628196326904373	3				NaN	NaN	0	NaN	6439	4610	11048
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11052	33.001	NaN	1366.2	30	0	329.69	0.106			+	26820	LVSTLKHK	8	53	463.2947692871094	NaN	0	463.2947692871094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LVSTLKHK_	REV__tr|U7T175|U7T175_FUSNUGlutathioneperoxidaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00644PE=3SV=1	40.5726180659479	1.7418937515398478	3				NaN	NaN	0	NaN	6440	4610	11048
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11053	33.003	NaN	1228.5	30	0	104.62	0.106			+	-1	WIRKHMWL	8	54	593.3219333507769	NaN	0	593.3221435546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_WIRKHM(Oxidation (M))WL_	REV__ENSG00000101493|ENST00000443185|ZNF516;REV__ZNF516|p.M844Cfs*131|1|0.2|ENSG00000101493|chr18:76379585-76379585|C/-|frameshift_variant;REV__ZNF516|p.V1038Sfs*122|1|0.38|ENSG00000101493|chr18:76379003-76379003|G/-|frameshift_variant	21.70233525837049	1.7418937515398478	3				NaN	NaN	0	NaN	6441	4610	11048
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11054	33.005	NaN	885.16	30	0	49.956	0.106			+	51419	YTTVLSVT	8	44	442.2423404263148	NaN	0	442.2420959472656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YTTVLSVT_	REV__ENST00000594883.1_1_19:57687110-57687311:+|nuORF	33.51558372728122	1.7418937515398478	3				NaN	NaN	0	NaN	6442	4610	11048
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11055	33.007	NaN	2551.4	30	0	391.24	0.035			+	18634	ISTLASLTAL	10	60	495.2980458278813	988.5815387225626	2	495.2975158691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ISTLASLTAL_	REV__ENST00000595686.5_1_2:145693006-145939807:+|nuORF	40.77816245573522	0.5419747034533848	3				NaN	NaN	0	NaN	6443	4610	11048
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11062	33.023	NaN	3529.2	30	0	784.6	0.214	+			46461	VETAKVYQL	9	62	525.794993877526	1049.575434821852	2	525.7947387695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VETAKVYQL_	ENSG00000137815|ENST00000389629|RTF1;RTF1|p.D528Ifs*12|1|0.29|ENSG00000137815|chr15:41477182-41477182|G/-|frameshift_variant	80.45461616416974	0.09558281504443908	3				NaN	NaN	0	NaN	6447	4613	11061
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11063	33.027	NaN	3309	30	0	250.77	0.106	+			19913	KEFDGKSLVSV	11	75	604.8303058256708	1207.6460587181416	2	604.8299560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEFDGKSLVSV_	ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;ENST00000517330.1_1_5:77337712-77337985:-|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P;nc|ENSG00000205940|Q58FF8|HSP90AB2P	82.83050618871818	0.12877585057862004	3				NaN	NaN	0	NaN	6448	4613	11061
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11064	33.029	NaN	778	30	0	78.489	0.106	+			43802	TLLTPAAAA	9	44	414.7449233547393	NaN	0	414.7447204589844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TLLTPAAAA_	ENST00000424946.1_1_12:105322435-105351963:-|nuORF;ENST00000432951.1_1_12:105325484-105351963:-|nuORF	45.9519527083369	0.2345902329052062	3				NaN	NaN	0	NaN	6449	4613	11061
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11065	33.03	NaN	1422.2	30	0	103.25	0.035	+			16714	HLEHPEQQ	8	60	509.2419738769531	NaN	0	509.2419738769531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HLEHPEQQ_	ENSG00000163207|ENST00000368764|IVL	25.450171626174864	1.7418937515398478	3				NaN	NaN	0	NaN	6450	4613	11061
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11069	33.044	NaN	2172.6	30	0	198.49	0.144	+			28056	NAARDFVNY	9	71	535.2578142427475	1068.5010755522949	2	535.2573852539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAARDFVNY_	DHX9|p.L1065Cfs*20|1|0.41|ENSG00000135829|chr1:182883563-182883563|C/-|frameshift_variant;DHX9|p.L657Ffs*44|1|0.34|ENSG00000135829|chr1:182876197-182876198|-/T|frameshift_variant;DHX9|p.Q155Lfs*8|1|0.08|ENSG00000135829|chr1:182853404-182853405|-/TG|frameshift_variant;ENSG00000135829|ENST00000367549|DHX9	43.650786325866115	0.37743712540499297	3				NaN	NaN	0	NaN	6451	4616	11068
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11073	33.06	NaN	1307	30	0	183.83	0.214	+			50462	YAEVGRVL	8	46	453.75594752067025	905.4973421081405	2	453.7556457519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YAEVGRVL_	ANKRD17|p.L2249Yfs*84|1|0.34|ENSG00000132466|chr4:73090884-73090884|G/-|frameshift_variant;ENSG00000131503|ENST00000360839|ANKHD1;ENSG00000132466|ENST00000358602|ANKRD17;ENST00000514252.1_1_4:73978989-74017230:-|nuORF;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1;nc|ENSG00000132466|O75179-2|ANKRD17;nc|ENSG00000132466|O75179-6|ANKRD17;nc|ENSG00000132466|O75179-7|ANKRD17	66.42927471994793	0.4381325844043345	3				NaN	NaN	0	NaN	6452	4619	11072
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11074	33.064	NaN	2131.3	30	0	157.94	0.106	+			10509	EVVEQRDSLV	10	64	587.3097131243379	1172.6048733154757	2	587.308837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EVVEQRDSLV_	ENSG00000243156|ENST00000441493|MICAL3;ENST00000252134.11_1_22:18273500-18274125:-|nuORF	40.77816245573522	0.5419747034533848	3				NaN	NaN	0	NaN	6453	4619	11072
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11075	33.066	NaN	1939.2	30	0	207.72	0.106	+			47865	VSLGLAVSK	9	51	437.2741528303342	872.5337527274684	2	437.2737731933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSLGLAVSK_	ENSG00000018869|ENST00000586929|ZNF582;ENSG00000197302|ENST00000316491|KRBOX5;ENSG00000197566|ENST00000311331|ZNF624;ENST00000529943.6_1_16:31724760-31765604:+|nuORF;ENST00000534277.5_1_16:31724760-31767037:+|nuORF;ENST00000579983.1_1_17:16534952-16537956:-|nuORF;ZNF624|p.I325Nfs*9|1|0.21|ENSG00000197566|chr17:16623912-16623913|-/T|frameshift_variant;ZNF624|p.I325Sfs*167|1|0.46|ENSG00000197566|chr17:16623913-16623913|T/-|frameshift_variant;ZNF624|p.K498Nfs*74|1|0.49|ENSG00000197566|chr17:16623392-16623392|T/-|frameshift_variant;ZNF624|p.K666Nfs*130|1|0.46|ENSG00000197566|chr17:16622888-16622888|T/-|frameshift_variant;ZNF624|p.K787Ifs*14|1|0.11|ENSG00000197566|chr17:16622526-16622527|-/ATAAATGTAATGAA|frameshift_variant	66.96192283764107	0.15557981141143568	3				NaN	NaN	0	NaN	6454	4619	11072
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11076	33.068	NaN	1548.8	30	0	151.06	0.035	+			27094	MANADLVKY	9	62	512.760025023568	NaN	0	512.7601318359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MANADLVKY_	ENSG00000145868|ENST00000340253|FBXO38;FBXO38|p.N697Kfs*44|1|0.3|ENSG00000145868|chr5:148427376-148427377|-/A|frameshift_variant;FBXO38|p.N697Tfs*32|1|0.21|ENSG00000145868|chr5:148427377-148427377|A/-|frameshift_variant;FBXO38|p.S849Afs*20|1|0.38|ENSG00000145868|chr5:148427834-148427834|G/-|frameshift_variant;nc|ENSG00000145868|Q6PIJ6-2|FBXO38;nc|ENSG00000145868|Q6PIJ6-3|FBXO38	47.95952297671804	0.22075498469600283	3				NaN	NaN	0	NaN	6455	4619	11072
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11080	33.082	NaN	8244.6	30	0	557.4	0.214	+			43788	TLKQVLLVGA	10	73	521.3373976492635	1040.660242365327	2	521.3375854492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TLKQVLLVGA_	ENSG00000112293|ENST00000230036|GPLD1	74.25504064058377	0.24255678544297835	3				NaN	NaN	0	NaN	6456	4622	11079
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11081	33.085	NaN	1314.5	30	0	81.671	0.106			+	9276	EHHSDLLL	8	58	482.24964246966016	NaN	0	482.24957275390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EHHSDLLL_	REV__ENST00000585814.1_1_19:3573615-3573789:-|nuORF	35.200714571348534	1.7418937515398478	3				NaN	NaN	0	NaN	6457	4622	11079
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11082	33.087	NaN	1581.9	30	0	106.52	0.106	+			11340	FLEKAIGLAV	10	62	530.8240439406471	NaN	0	530.823974609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FLEKAIGLAV_	ENSG00000255346|ENST00000388866|NOX5;ENST00000527315.5_1_15:69323805-69349033:+|nuORF;nc|ENSG00000290203|Q96PH1-2|NOX5;nc|ENSG00000290203|Q96PH1-3|NOX5;nc|ENSG00000290203|Q96PH1-4|NOX5;nc|ENSG00000290203|Q96PH1-5|NOX5;nc|ENSG00000290203|Q96PH1-6|NOX5	45.97224482568171	0.33106653400957564	3				NaN	NaN	0	NaN	6458	4622	11079
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11083	33.089	NaN	1309	30	0	189.08	0.106				-1	DTVAVKML	8	44	446.7441742355959	891.4737955379918	2	446.7438659667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_DTVAVKM(Oxidation (M))L_	ENSG00000037280|ENST00000261937|FLT4;ENST00000507059.5_1_5:180043993-180056331:-|nuORF;nc|ENSG00000037280|P35916-1|FLT4	40.5726180659479	0.6527593143185008	3				NaN	NaN	0	NaN	6459	4622	11079
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11084	33.091	NaN	1066.4	30	0	109.99	0.034	+			1770	AIATLHGKI	9	54	462.2873507717431	922.5601486102862	2	462.2873229980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AIATLHGKI_	ENSG00000155636|ENST00000286070|RBM45;nc|ENSG00000155636|Q8IUH3|RBM45	27.882242232435846	0.5426732730940306	3				NaN	NaN	0	NaN	6460	4622	11079
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11090	33.105	NaN	3689.2	30	0	438.52	0.214	+			10480	EVQQHMKSL	9	77	550.2807301360849	1098.5469073389697	2	550.280517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EVQQHMKSL_	ENSG00000166415|ENST00000360509|WDR72	45.97224482568171	0.3502073465782774	3				NaN	NaN	0	NaN	6463	4625	11089
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11091	33.109	NaN	2690.3	30	0	876.08	0.106			+	27558	MPELTINAP	9	58	493.2533986182318	984.4922443032636	2	493.2521667480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MPELTINAP_	REV__ENSG00000104774|ENST00000456935|MAN2B1;REV__ENST00000469423.1_1_19:12757436-12758173:-|nuORF;REV__nc|ENSG00000104774|O00754-2|MAN2B1	47.657333605630114	0.33044192980041115	3				NaN	NaN	0	NaN	6464	4625	11089
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11092	33.111	NaN	1938.3	30	0	641.71	0.106			+	9622	ELPRLAEF	8	48	487.76958261957935	973.5246123059587	2	488.2703552246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ELPRLAEF_	REV__DYNC1H1|p.K3112Hfs*3|1|0.31|ENSG00000197102|chr14:102027998-102027999|-/TCACAAG|frameshift_variant;REV__DYNC1H1|p.W4201Gfs*43|1|0.42|ENSG00000197102|chr14:102043958-102043958|G/-|frameshift_variant;REV__ENSG00000197102|ENST00000360184|DYNC1H1	31.954861631926434	0.7126016770032289	3				NaN	NaN	0	NaN	6465	4625	11089
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11093	33.113	NaN	1634	30	0	95.168	0.035	+			17372	IALVHTDSY	9	62	509.76423629694614	1017.5139196606923	2	510.2631530761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IALVHTDSY_	ENSG00000198961|ENST00000361189|PJA2;nc|ENSG00000198961|O43164-2|PJA2;PJA2|p.D450Rfs*6|1|0.16|ENSG00000198961|chr5:109368682-109368683|-/T|frameshift_variant	45.97224482568171	0.3502073465782774	3				NaN	NaN	0	NaN	6466	4625	11089
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11097	33.127	NaN	5612.4	30	0	1114.9	0.214	+			8502	EATGQFHVY	9	68	526.2460173896606	1050.477481846121	2	526.24609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EATGQFHVY_	CEACAM6|p.I217Mfs*11|3|0.07|ENSG00000086548|chr19:41761474-41761475|-/G|frameshift_variant;chr19:41756959-41758061|166|203.57|0.0|24.28|+|2|CEACAM6,None|1;ENSG00000079385|ENST00000161559|CEACAM1;ENSG00000086548|ENST00000199764|CEACAM6;ENSG00000170956|ENST00000357396|CEACAM3;ENST00000344391.9_1_19:43023158-43032553:-|nuORF;ENST00000377806.7_1_19:43023094-43032607:-|nuORF;ENST00000403136.1_1_19:43025413-43032607:-|nuORF;nc|ENSG00000079385|P13688-10|CEACAM1;nc|ENSG00000079385|P13688-11|CEACAM1;nc|ENSG00000079385|P13688-2|CEACAM1;nc|ENSG00000079385|P13688-3|CEACAM1;nc|ENSG00000079385|P13688-4|CEACAM1;nc|ENSG00000079385|P13688-5|CEACAM1;nc|ENSG00000079385|P13688-6|CEACAM1;nc|ENSG00000079385|P13688-7|CEACAM1;nc|ENSG00000079385|P13688-8|CEACAM1;nc|ENSG00000079385|P13688-9|CEACAM1;nc|ENSG00000170956|P40198-2|CEACAM3;nc|ENSG00000170956|P40198-3|CEACAM3	73.97473282117947	0.12360187025703594	3				NaN	NaN	0	NaN	6467	4628	11096
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11098	33.13	NaN	3835.9	30	0	1204.4	0.106			+	6125	AVPTTVAKPA	10	63	477.7850317529581	953.5555105727162	2	477.784423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVPTTVAKPA_	REV__ENST00000483823.1_1_3:88997907-88998639:+|nuORF	79.45101966838831	0.2001060845487004	3				NaN	NaN	0	NaN	6468	4628	11096
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11099	33.132	NaN	2030.1	30	0	259.15	0.106	+			41238	SVLGISTPK	9	58	451.2715063534125	900.5284597736251	2	451.2707824707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVLGISTPK_	ENSG00000151327|ENST00000280987|FAM177A1;nc|ENSG00000151327|Q8N128|FAM177A1	65.46538089061403	0.16805504838372562	3				NaN	NaN	0	NaN	6469	4628	11096
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11100	33.134	NaN	2120.9	30	0	194.01	0.106	+			36473	SEVSKIVTV	9	60	481.2821357141818	960.5497184951636	2	481.281982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SEVSKIVTV_	ENSG00000163535|ENST00000357799|SGO2;nc|ENSG00000163535|Q562F6-2|SGO2	63.53385203322761	0.18415635464017938	3				NaN	NaN	0	NaN	6470	4628	11096
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11101	33.136	NaN	1495.1	30	0	230.01	0.106			+	2711	AQSITTSHEW	10	62	580.2739167479966	NaN	0	580.2728881835938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AQSITTSHEW_	REV__OR9Q2|p.G89S|1|0.36|ENSG00000186513|chr11:58190755-58190755|G/A|missense_variant	29.170058357718403	0.40439580130713204	3				NaN	NaN	0	NaN	6471	4628	11096
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11102	33.138	NaN	2783	30	0	232.11	0.106	+			17373	IALVHTDSY	9	61	509.76423629694614	1017.5139196606923	2	510.2654724121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IALVHTDSY_	ENSG00000198961|ENST00000361189|PJA2;nc|ENSG00000198961|O43164-2|PJA2;PJA2|p.D450Rfs*6|1|0.16|ENSG00000198961|chr5:109368682-109368683|-/T|frameshift_variant	93.19546047674547	0.05585629608842056	3				NaN	NaN	0	NaN	6472	4628	11096
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11103	33.14	NaN	1689	30	0	174.05	0.035			+	45806	VAIGHGWLQ	9	58	490.769718043188	979.524883153176	2	490.7690124511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VAIGHGWLQ_	REV__A1CF|p.V393Cfs*32|1|0.04|ENSG00000148584|chr10:50814027-50814028|-/A|frameshift_variant;REV__A1CF|p.V393Ffs*3|1|0.04|ENSG00000148584|chr10:50814028-50814029|-/TAAAA|frameshift_variant;REV__ENSG00000148584|ENST00000373997|A1CF;REV__nc|ENSG00000148584|Q9NQ94-3|A1CF;REV__nc|ENSG00000148584|Q9NQ94-4|A1CF;REV__nc|ENSG00000148584|Q9NQ94-5|A1CF;REV__nc|ENSG00000148584|Q9NQ94|A1CF	38.80614096846853	0.43426287593479557	3				NaN	NaN	0	NaN	6473	4628	11096
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11109	33.156	NaN	1667.7	30	0	282.85	0.145			+	-1	RIVMRFFY	8	66	574.3095529797664	1146.6045530263327	2	574.3092041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_RIVM(Oxidation (M))RFFY_	REV__ENSG00000130943|ENST00000253255|PKDREJ;REV__PKDREJ|p.F1376Lfs*19|1|0.23|ENSG00000130943|chr22:46259195-46259195|A/-|frameshift_variant;REV__PKDREJ|p.H1268Qfs*19|1|0.09|ENSG00000130943|chr22:46259519-46259520|-/AAATC|frameshift_variant;REV__PKDREJ|p.L531Ffs*4|1|0.27|ENSG00000130943|chr22:46261730-46261731|-/A|frameshift_variant;REV__PKDREJ|p.N1646Tfs*66|1|0.36|ENSG00000130943|chr22:46258386-46258386|T/-|frameshift_variant;REV__PKDREJ|p.P1887Qfs*10|2|0.18|ENSG00000130943|chr22:46257665-46257665|A/-|frameshift_variant;REV__PKDREJ|p.S632Ffs*10|1|0.41|ENSG00000130943|chr22:46261430-46261431|-/G|frameshift_variant	33.51558372728122	0.7005509609380386	3				NaN	NaN	0	NaN	6476	4631	11108
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11114	33.172	NaN	5522.6	30	0	882.06	0.214	+			36843	SIFGGAKPV	9	51	438.2531335796436	874.4917142260872	2	438.25262451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIFGGAKPV_	ENSG00000063046|ENST00000262056|EIF4B;ENST00000432132.2_1_9:98909238-98910135:+|nuORF;ENST00000432307.1_1_X:110862947-110863739:-|nuORF;nc|ENSG00000063046|P23588-2|EIF4B	64.20726635412375	0.17854274437659667	3				NaN	NaN	0	NaN	6478	4634	11113
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11115	33.176	NaN	2867.5	30	0	382.93	0.106			+	10312	ETQYQDLS	8	58	492.2196883131243	982.4248236930487	2	492.218994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ETQYQDLS_	REV__ENSG00000068831|ENST00000394432|RASGRP2;REV__ENST00000421556.5_1_11:64494776-64511570:-|nuORF;REV__ENST00000464324.5_1_11:64494776-64507712:-|nuORF;REV__ENST00000465852.1_1_11:64502995-64504542:-|nuORF;REV__ENST00000494001.5_1_11:64503317-64504482:-|nuORF;REV__nc|ENSG00000068831|Q7LDG7-2|RASGRP2;REV__nc|ENSG00000068831|Q7LDG7-4|RASGRP2;REV__RASGRP2|p.R494Afs*25|1|0.15|ENSG00000068831|chr11:64730128-64730128|C/-|frameshift_variant	51.33545320467046	0.5859736979383976	3				NaN	NaN	0	NaN	6479	4634	11113
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11116	33.178	NaN	4042	30	0	442.23	0.106			+	29474	PCRCRLGAI	9	65	494.76348999391666	987.5124270546333	2	494.76556396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PCRCRLGAI_	REV__CELSR3|p.A2340Pfs*45|1|0.25|ENSG00000008300|chr3:48647952-48647952|C/-|frameshift_variant;REV__CELSR3|p.R2529Pfs*2|1|0.34|ENSG00000008300|chr3:48645746-48645747|-/G|frameshift_variant;REV__CELSR3|p.S1935Afs*4|1|0.38|ENSG00000008300|chr3:48651998-48651998|G/-|frameshift_variant;REV__ENSG00000008300|ENST00000164024|CELSR3;REV__nc|ENSG00000008300|Q9NYQ7-2|CELSR3	57.81127852772723	0.2318599694398087	3				NaN	NaN	0	NaN	6480	4634	11113
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11117	33.179	NaN	4036	30	0	1277.6	0.106	+			30662	QAVILDQKY	9	63	539.3009383467588	1076.5873237603175	2	539.3005981445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QAVILDQKY_	ENSG00000127831|ENST00000248444|VIL1	112.41091882917199	0.026537921851008135	3				NaN	NaN	0	NaN	6481	4634	11113
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11118	33.181	NaN	3103.5	30	0	222.38	0.106	+			48758	VTVRPGLAM	9	68	472.27397936705495	942.5334058009099	2	472.2733459472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTVRPGLAM_	ENSG00000099974|ENST00000215770|DDTL;ENSG00000099977|ENST00000398344|DDT;ENST00000444947.2_1_22:24315904-24316657:-|nuORF;nc|ENSG00000099977|P30046-2|DDT	64.20726635412375	0.17854274437659667	3				NaN	NaN	0	NaN	6482	4634	11113
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11119	33.183	NaN	968.7	30	0	83.732	0.106	+			26648	LVEDKVKS	8	55	459.2690626996673	NaN	0	459.268798828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LVEDKVKS_	ENSG00000100330|ENST00000401950|MTMR3;nc|ENSG00000100330|Q13615-2|MTMR3;nc|ENSG00000100330|Q13615-3|MTMR3	58.78195531508484	1.7418937515398478	3				NaN	NaN	0	NaN	6483	4634	11113
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11120	33.185	NaN	1484.5	30	0	241.2	0.034			+	23578	LALPPLNNG	9	48	454.7634763336597	NaN	0	454.76312255859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LALPPLNNG_	REV__DSEL|p.L827Wfs*85|1|0.11|ENSG00000171451|chr18:67512159-67512159|A/-|frameshift_variant;REV__DSEL|p.R969Efs*16|1|0.36|ENSG00000171451|chr18:67511734-67511734|T/-|frameshift_variant;REV__DSEL|p.R969Kfs*4|1|0.26|ENSG00000171451|chr18:67511733-67511734|-/T|frameshift_variant;REV__ENSG00000171451|ENST00000310045|DSEL	42.47446043378293	0.25855550551448697	3				NaN	NaN	0	NaN	6484	4634	11113
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11124	33.199	NaN	5071.1	30	0	728.8	0.214	+			25139	LLSDKATSPL	10	63	522.8004171906981	1043.5862814481961	2	522.8010864257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LLSDKATSPL_	ENSG00000130529|ENST00000252826|TRPM4;ENST00000596338.5_1_19:49685858-49692185:+|nuORF;nc|ENSG00000130529|Q8TD43-2|TRPM4;nc|ENSG00000130529|Q8TD43-3|TRPM4;TRPM4|p.F902Sfs*22|1|0.3|ENSG00000130529|chr19:49200356-49200356|T/-|frameshift_variant;TRPM4|p.W1124Gfs*5|1|0.32|ENSG00000130529|chr19:49210750-49210751|GT/-|frameshift_variant	76.16968421966216	0.22691431239609447	3				NaN	NaN	0	NaN	6485	4637	11123
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11125	33.202	NaN	7461.4	30	0	1542.7	0.106			+	7875	DRKMMNLK	8	67	518.2763448890738	1034.5381368449475	2	518.277099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DRKMMNLK_	REV__ENSG00000178965|ENST00000326665|ERICH3;REV__ERICH3|p.E543Rfs*16|1|0.36|ENSG00000178965|chr1:74599795-74599795|T/-|frameshift_variant;REV__ERICH3|p.E543Rfs*3|1|0.13|ENSG00000178965|chr1:74599794-74599795|-/T|frameshift_variant;REV__ERICH3|p.P407Tfs*7|2|0.18|ENSG00000178965|chr1:74606871-74606872|-/T|frameshift_variant;REV__ERICH3|p.R829Kfs*25|1|0.29|ENSG00000178965|chr1:74573224-74573225|-/T|frameshift_variant;REV__ERICH3|p.S513Ifs*2|1|0.49|ENSG00000178965|chr1:74599884-74599885|-/T|frameshift_variant;REV__ERICH3|p.T766Rfs*23|1|0.29|ENSG00000178965|chr1:74573414-74573414|T/-|frameshift_variant	76.84663266511073	0.3498490246073164	3				NaN	NaN	0	NaN	6486	4637	11123
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11126	33.204	NaN	1550.6	30	0	241.84	0.106	+			26548	LTSGIFETK	9	49	498.274255279268	994.533957625336	2	498.2741394042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LTSGIFETK_	ENSG00000087460|ENST00000371085|GNAS;ENST00000313949.11_1_20:57415898-57485881:+|nuORF;ENST00000371075.7_3_20:57415898-57485881:+|nuORF;ENST00000476196.5_1_20:57478538-57485881:+|nuORF;ENST00000477931.5_1_20:57464155-57485881:+|nuORF;ENST00000480975.5_1_20:57464272-57485881:+|nuORF;ENST00000487981.5_1_20:57478601-57484479:+|nuORF;ENST00000496934.5_1_20:57473969-57485881:+|nuORF;GNAS|p.R201C|2|0.33|ENSG00000087460|chr20:58909365-58909365|C/T|missense_variant;nc|ENSG00000087460|P63092-2|GNAS;nc|ENSG00000087460|P63092-3|GNAS;nc|ENSG00000087460|P63092-4|GNAS;nc|ENSG00000087460|Q5JWF2-2|GNAS;nc|ENSG00000087460|Q5JWF2|GNAS	54.776311868738084	0.25715957988447635	3				NaN	NaN	0	NaN	6487	4637	11123
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11127	33.206	NaN	1234.1	30	0	194.06	0.036	+			18100	IKTMSIMDF	9	51	543.271728515625	NaN	0	543.271728515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IKTMSIMDF_	ENSG00000163214|ENST00000457308|DHX57	30.503639358989545	0.3235605894931338	3				NaN	NaN	0	NaN	6488	4637	11123
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11132	33.22	NaN	3612.4	30	0	332.95	0.214			+	25821	LSDGLELLE	9	66	494.76348999391666	987.5124270546333	2	495.26226806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSDGLELLE_	REV__ENSG00000001629|ENST00000265742|ANKIB1	45.9519527083369	0.35044536499095585	3				NaN	NaN	0	NaN	6490	4640	11131
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11133	33.224	NaN	3548.3	30	0	252.96	0.106	+			23420	LACGVAKVL	9	62	465.7756098822332	929.5366668312664	2	465.7742919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LAC(Carbamidomethyl (C))GVAKVL_	ENSG00000265972|ENST00000582401|TXNIP	97.47269410471826	0.04379738608259218	3				NaN	NaN	0	NaN	6491	4640	11131
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11134	33.226	NaN	2799.1	30	0	384.3	0.106	+			46666	VGFSYGDTKV	10	66	536.7697439471522	1071.5249349611042	2	536.7692260742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VGFSYGDTKV_	ENSG00000168658|ENST00000477737|VWA3B;ENST00000490947.2_1_2:98862011-98928799:+|nuORF;ENST00000495571.5_1_2:98833411-98928809:+|nuORF;nc|ENSG00000168658|Q502W6-3|VWA3B;nc|ENSG00000168658|Q502W6-4|VWA3B;nc|ENSG00000168658|Q502W6-5|VWA3B;nc|ENSG00000168658|Q502W6-6|VWA3B;nc|ENSG00000168658|Q502W6-7|VWA3B	36.446750945000026	0.5818864909973037	3				NaN	NaN	0	NaN	6492	4640	11131
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11135	33.228	NaN	1727.1	30	0	149.79	0.037				-1	EPPIPHYAAM	10	60	571.2696809462557	1140.5248089593113	2	571.2688598632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_EPPIPHYAAM(Oxidation (M))_	ENSG00000124920|ENST00000278836|MYRF;MYRF|p.K745Rfs*45|1|0.07|ENSG00000124920|chr11:61779550-61779550|C/-|frameshift_variant;MYRF|p.S264Afs*8|1|0.32|ENSG00000124920|chr11:61771541-61771541|C/-|frameshift_variant;MYRF|p.S264Qfs*74|1|0.42|ENSG00000124920|chr11:61771540-61771541|-/C|frameshift_variant;MYRF|p.S823Vfs*22|1|0.07|ENSG00000124920|chr11:61780767-61780767|G/-|frameshift_variant;nc|ENSG00000124920|Q9Y2G1-2|MYRF	30.503639358989545	0.6307262373768582	3				NaN	NaN	0	NaN	6493	4640	11131
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11142	33.244	NaN	5346.7	30	0	1663.9	0.214	+			14992	GTMTGMLYK	9	64	501.24369356261406	1000.4728341920281	2	501.2430419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTMTGMLYK_	ENSG00000178440|ENST00000651763|TIMM23B-AGAP6;ENSG00000204152|ENST00000651259|TIMM23B;ENSG00000265354|ENST00000580018|TIMM23;nc|ENSG00000204152|Q5SRD1-2|TIMM23B	85.16082228582465	0.07850854922700509	3				NaN	NaN	0	NaN	6497	4643	11141
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11143	33.247	NaN	2660.3	30	0	461.74	0.106	+			48389	VTIAITGADI	10	64	487.28206734213126	972.5495817510625	2	487.2809753417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTIAITGADI_	tr|U7T6W5|U7T6W5_FUSNUCarboxyltransferasedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00031PE=4SV=1	39.252832667884924	0.5560298534376815	3				NaN	NaN	0	NaN	6498	4643	11141
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11144	33.249	NaN	5118.1	30	0	851.58	0.106	+			39498	STFNNDILSK	10	64	569.7907105375804	1137.5668681419606	2	569.7908935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STFNNDILSK_	ENSG00000111912|ENST00000392477|NCOA7;nc|ENSG00000111912|Q8NI08-2|NCOA7;nc|ENSG00000111912|Q8NI08-5|NCOA7;nc|ENSG00000111912|Q8NI08-7|NCOA7	94.4091291819064	0.10583072883246657	3				NaN	NaN	0	NaN	6499	4643	11141
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11145	33.251	NaN	3227	30	0	907.74	0.106			+	10925	FDLRKQSY	8	64	528.7774888284151	1055.5404247236302	2	528.7772216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FDLRKQSY_	REV__ENST00000305031.4_1_5:129521119-129521206:+|nuORF	54.776311868738084	0.5534952410049249	3				NaN	NaN	0	NaN	6500	4643	11141
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11146	33.253	NaN	1529.2	30	0	168.13	0.04			+	-1	TTMEVKTQERE	11	66	684.326620837824	NaN	0	684.3265380859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_TTM(Oxidation (M))EVKTQERE_	REV__ENSG00000114923|ENST00000358055|SLC4A3;REV__ENST00000425141.5_1_2:220498093-220506447:+|nuORF;REV__nc|ENSG00000114923|P48751-2|SLC4A3;REV__nc|ENSG00000114923|P48751-3|SLC4A3	26.063383197487333	0.44926255568796863	3				NaN	NaN	0	NaN	6501	4643	11141
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11156	33.275	NaN	4626.7	30	0	1328.3	0.214	+			15308	GTVDVTPFIKK	11	49	402.2364627071545	1203.6875587216634	3	402.57000732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTVDVTPFIKK_	ENSG00000198408|ENST00000361464|OGA;nc|ENSG00000198408|O60502-2|OGA;nc|ENSG00000198408|O60502-4|OGA	36.31764250033197	0.6083289427130232	3				NaN	NaN	0	NaN	6508	4646	11155
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11157	33.278	NaN	2717.8	30	0	319.09	0.106	+			15324	GTVITSVIK	9	53	459.2869299193314	916.5593069054628	2	459.2865295410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTVITSVIK_	ENSG00000120690|ENST00000239882|ELF1;nc|ENSG00000120690|P32519-2|ELF1	75.04331003522576	0.118981335847003	3				NaN	NaN	0	NaN	6509	4646	11155
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11158	33.28	NaN	784.56	30	0	97.267	0.106				-1	 	0	37	343.23529862760086	684.4560443220017	2	343.2350769042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	6510	4646	11155
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11159	33.282	NaN	1393.4	30	0	140.68	0.106			+	25569	LQDLSPYQY	9	57	563.7751615016147	NaN	0	563.7760009765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LQDLSPYQY_	REV__ENSG00000165795|ENST00000556147|NDRG2;REV__ENST00000553741.5_1_14:21488585-21492212:-|nuORF;REV__nc|ENSG00000165795|Q9UN36-2|NDRG2;REV__nc|ENSG00000165795|Q9UN36-3|NDRG2;REV__nc|ENSG00000165795|Q9UN36-4|NDRG2;REV__nc|ENSG00000165795|Q9UN36-5|NDRG2;REV__nc|ENSG00000165795|Q9UN36-6|NDRG2	42.396135135203025	0.2590952873412954	3				NaN	NaN	0	NaN	6511	4646	11155
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11160	33.284	NaN	1185.3	30	0	78.154	0.039	+			20001	KEIETTGTYQL	11	49	641.8302741345399	1281.6459953358797	2	641.830322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEIETTGTYQL_	ENSG00000007171|ENST00000313735|NOS2;nc|ENSG00000007171|P35228-2|NOS2;NOS2|p.A650Pfs*53|1|0.21|ENSG00000007171|chr17:27769063-27769063|C/-|frameshift_variant;NOS2|p.Y709*|1|0.33|ENSG00000007171|chr17:27767745-27767745|G/-|frameshift_variant	43.41853373365257	0.5111670701941979	3				NaN	NaN	0	NaN	6512	4646	11155
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11165	33.298	NaN	5167.9	30	0	808.18	0.214	+			8414	EAQKNKPSL	9	68	507.782641432868	1013.550729932536	2	507.78204345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EAQKNKPSL_	ENSG00000120341|ENST00000308284|SEC16B;ENST00000464428.2_1_1:177930716-177937161:-|nuORF;ENST00000466953.6_1_1:177929778-177937161:-|nuORF;nc|ENSG00000120341|Q96JE7-2|SEC16B;SEC16B|p.Y799Tfs*17|1|0.42|ENSG00000120341|chr1:177937322-177937322|A/-|frameshift_variant	52.936696900407355	0.27249468807391813	3				NaN	NaN	0	NaN	6514	4649	11164
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11166	33.302	NaN	2594	30	0	333.91	0.106	+			11611	FPSVSPSAGKL	11	62	545.300600881904	1088.5866488306078	2	545.3008422851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FPSVSPSAGKL_	ENST00000502125.6_1_15:96826128-96870526:-|nuORF;ENST00000558935.1_1_15:96833853-96870226:-|nuORF;ENST00000560010.1_1_15:96833853-96870526:-|nuORF;ENST00000560170.1_1_15:96828545-96870526:-|nuORF;ENST00000561344.5_1_15:96831982-96833988:-|nuORF	36.446750945000026	0.6065623449959539	3				NaN	NaN	0	NaN	6515	4649	11164
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11167	33.304	NaN	2094.7	30	0	298.14	0.106			+	37974	SPHLPSVY	8	51	450.2350167813709	898.4554806295419	2	450.234619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SPHLPSVY_	REV__SIGLEC7|p.S188Y|1|0.34|ENSG00000168995|chr19:51144535-51144535|C/A|missense_variant	26.79610172149135	0.7524337208463756	3				NaN	NaN	0	NaN	6516	4649	11164
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11168	33.306	NaN	2570.7	30	0	307.07	0.106	+			29030	NSTFNQVVLK	10	62	575.3165671199674	1148.6185813067348	2	575.3167114257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NSTFNQVVLK_	ENSG00000063177|ENST00000549920|RPL18;ENST00000547892.1_1_19:49120227-49120731:-|nuORF;ENST00000552347.5_1_19:49120227-49122400:-|nuORF;ENST00000552705.5_1_19:49119841-49122400:-|nuORF;ENST00000552851.1_1_19:49119841-49122400:-|nuORF;nc|ENSG00000063177|Q07020-2|RPL18	32.75053402867276	0.6123771875927935	3				NaN	NaN	0	NaN	6517	4649	11164
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11169	33.307	NaN	1080.6	30	0	85.967	0.034			+	-1	VIMVAKMK	8	54	468.2722612062212	NaN	0	468.2718505859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_VIM(Oxidation (M))VAKMK_	REV__ENST00000484560.1_1_3:146234424-146234930:-|nuORF	37.028477286268924	1.7418937515398478	3				NaN	NaN	0	NaN	6518	4649	11164
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11176	33.324	NaN	6653.1	30	0	631.62	0.214	+			10727	FADQEVRSL	9	71	532.7727777080398	1063.5310024828796	2	532.7720947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FADQEVRSL_	ENSG00000011405|ENST00000691414|PIK3C2A	104.42354056486148	0.0346881550498418	3				NaN	NaN	0	NaN	6522	4652	11175
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11177	33.327	NaN	5402.7	30	0	1517.7	0.106	+			47556	VRCMHLLL	8	59	500.77524793332174	999.5359429334435	2	500.7745666503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_VRCM(Oxidation (M))HLLL_	ENSG00000130508|ENST00000252804|PXDN;nc|ENSG00000130508|Q92626-2|PXDN;PXDN|p.C857Afs*5|2|0.33|ENSG00000130508|chr2:1649212-1649212|G/-|frameshift_variant;PXDN|p.E1339Lfs*66|1|0.26|ENSG00000130508|chr2:1639361-1639362|-/AG|frameshift_variant;PXDN|p.G470Rfs*19|1|0.14|ENSG00000130508|chr2:1664962-1664963|-/T|frameshift_variant;PXDN|p.N1190Mfs*12|1|0.22|ENSG00000130508|chr2:1648211-1648211|T/-|frameshift_variant;PXDN|p.N1194Tfs*8|1|0.25|ENSG00000130508|chr2:1648199-1648199|T/-|frameshift_variant;PXDN|p.N865Mfs*25|3|0.42|ENSG00000130508|chr2:1649188-1649188|G/-|frameshift_variant;PXDN|p.R1242Pfs*22|1|0.07|ENSG00000130508|chr2:1644636-1644637|-/AG|frameshift_variant	54.76467175910256	0.5536104764165384	3				NaN	NaN	0	NaN	6523	4652	11175
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11178	33.329	NaN	3199.1	30	0	1065.2	0.106				-1	 	0	66	558.2492200451707	1114.4838871571412	2	558.248779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	6524	4652	11175
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11179	33.331	NaN	1292.1	30	0	127.26	0.106			+	13208	GIEQRLIAHFF	11	50	665.8679070176812	NaN	0	665.8681640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GIEQRLIAHFF_	REV__ABCB4|p.A252Qfs*15|1|0.52|ENSG00000005471|chr7:87450048-87450048|T/-|frameshift_variant;REV__ABCB4|p.L724Ffs*13|1|0.12|ENSG00000005471|chr7:87423948-87423948|C/-|frameshift_variant;REV__ABCB4|p.N808Tfs*27|1|0.47|ENSG00000005471|chr7:87418592-87418592|T/-|frameshift_variant;REV__ABCB4|p.S242Kfs*7|1|0.05|ENSG00000005471|chr7:87450076-87450077|-/TGGTT|frameshift_variant;REV__ABCB4|p.S339Qfs*3|1|0.56|ENSG00000005471|chr7:87444966-87444966|A/-|frameshift_variant;REV__ENSG00000005471|ENST00000649586|ABCB4;REV__ENST00000473795.1_1_7:87082258-87104781:-|nuORF;REV__nc|ENSG00000005471|P21439-3|ABCB4;REV__nc|ENSG00000005471|P21439|ABCB4	28.5767321226876	0.4380616241468488	3				NaN	NaN	0	NaN	6525	4652	11175
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11180	33.333	NaN	1057.5	30	0	199.59	0.106	+			12601	GEHPKRRK	8	32	336.5340379688297	NaN	0	336.868408203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GEHPKRRK_	ENSG00000070495|ENST00000397625|JMJD6;nc|ENSG00000070495|Q6NYC1-2|JMJD6;nc|ENSG00000070495|Q6NYC1-3|JMJD6	20.481830146152948	1.741893751539848	3				NaN	NaN	0	NaN	6526	4652	11175
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11181	33.334	NaN	1097.9	30	0	127.15	0.106	+			26199	LSSAAALIP	9	41	421.7530611777645	841.491569422329	2	421.7521667480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSSAAALIP_	CADM1|p.F33S|1|0.09|ENSG00000182985|chr11:115504297-115504297|A/G|missense_variant	33.51558372728122	0.4900267029546261	3				NaN	NaN	0	NaN	6527	4652	11175
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11182	33.336	NaN	998.29	30	0	78.216	0.038	+			46062	VCISIPEVDAY	11	48	604.7986450195312	NaN	0	604.7986450195312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VCISIPEVDAY_	ENSG00000158258|ENST00000458420|CLSTN2	20.94693142431847	0.456735970842152	3				NaN	NaN	0	NaN	6528	4652	11175
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11190	33.355	NaN	2058	30	0	275.86	0.141	+			29803	PKCDGQVL	8	52	430.22106319087163	858.4275734485433	2	430.2204284667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PKCDGQVL_	ENSG00000006607|ENST00000264042|FARP2;ENST00000473082.5_1_2:242312627-242344774:+|nuORF;nc|ENSG00000006607|O94887-2|FARP2;nc|ENSG00000006607|O94887-3|FARP2	51.33545320467046	0.5859736979383976	3				NaN	NaN	0	NaN	6533	4655	11189
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11194	33.37	NaN	2272.7	30	0	320.5	0.214	+			7403	DEHAGVISV	9	60	463.7326537666202	925.4507546000405	2	463.7322692871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DEHAGVISV_	ENSG00000134248|ENST00000602318|LAMTOR5;ENST00000531779.1_1_1:110946539-110950281:-|nuORF	42.396135135203025	0.392153681582562	3				NaN	NaN	0	NaN	6534	4658	11193
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11195	33.374	NaN	2455.3	30	0	450.86	0.106				-1	MCHPVILLP	9	58	519.7770328715872	1037.5395128099742	2	519.7781372070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_M(Oxidation (M))CHPVILLP_	MSH6|p.R1076H|1|0.13|ENSG00000116062|chr2:47803474-47803474|G/A|missense_variant	39.021493756699265	0.43173687394350213	3				NaN	NaN	0	NaN	6535	4658	11193
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11196	33.376	NaN	1497.4	30	0	145.67	0.106			+	24619	LGSASVVAEL	10	48	473.26530930116735	944.5160656691347	2	473.2632141113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LGSASVVAEL_	REV__ENST00000537726.5_1_15:80454796-80454856:+|nuORF	51.33545320467046	0.4446945571623749	3				NaN	NaN	0	NaN	6536	4658	11193
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11197	33.378	NaN	1419.6	30	0	129.37	0.035				-1	SLSRVCVPL	9	62	515.7903590492597	1029.5661651653193	2	515.7906494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_SLSRVC(Carbamidomethyl (C))VPL_	ENSG00000158169|ENST00000289081|FANCC;FANCC|p.V449Cfs*22|1|0.07|ENSG00000158169|chr9:95107254-95107254|C/-|frameshift_variant	38.80614096846853	0.43426287593479557	3				NaN	NaN	0	NaN	6537	4658	11193
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11203	33.396	NaN	14552	30	0	1514.5	0.214	+			42664	TAVTVNQSL	9	67	466.7562657462176	931.4979785592352	2	466.7556457519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAVTVNQSL_	CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000425226.1_1_2:203706028-203706388:-|nuORF;ENST00000550170.5_1_12:53294858-53298765:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	214.23057602635166	3.58823238688865E-08	3				NaN	NaN	0	NaN	6540	4661	11202
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11204	33.4	NaN	4161.9	30	0	491.86	0.106				-1	 	0	56	478.7802574718303	955.5459620104606	2	478.7796630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	6541	4661	11202
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11205	33.402	NaN	3614.2	30	0	426.53	0.106	+			8121	DYMKTTSNF	9	64	553.7448708202137	1105.4751887072273	2	553.7451782226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DYMKTTSNF_	ENSG00000165525|ENST00000298310|NEMF;nc|ENSG00000165525|O60524-3|NEMF;nc|ENSG00000165525|O60524-4|NEMF;NEMF|p.K641Rfs*9|1|0.15|ENSG00000165525|chr14:49802721-49802721|T/-|frameshift_variant;NEMF|p.M879*|1|0.12|ENSG00000165525|chr14:49789558-49789558|T/-|frameshift_variant;NEMF|p.M879Nfs*10|1|0.13|ENSG00000165525|chr14:49789557-49789558|-/T|frameshift_variant	91.26522074875469	0.06129826844580791	3				NaN	NaN	0	NaN	6542	4661	11202
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11206	33.404	NaN	2137.3	30	0	339.62	0.106			+	25954	LSIGLLGIGP	10	53	470.29765236631914	938.5807517994383	2	470.29705810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSIGLLGIGP_	REV__ENSG00000177465|ENST00000326303|ACOT4	45.9519527083369	0.4943008177357963	3				NaN	NaN	0	NaN	6543	4661	11202
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11207	33.406	NaN	3974.6	30	0	987.71	0.037				-1	ALMLFNFIY	9	69	574.2941638832606	NaN	0	574.294677734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_ALM(Oxidation (M))LFNFIY_	ENSG00000249715|ENST00000624922|FER1L5;nc|ENSG00000249715|A0AVI2-2|FER1L5;nc|ENSG00000249715|A0AVI2-4|FER1L5	33.51558372728122	0.30835390848773375	3				NaN	NaN	0	NaN	6544	4661	11202
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11214	33.422	NaN	4356.6	30	0	1491.2	0.214	+			31861	QPVKVLGENY	10	69	573.811664508604	1145.608776084008	2	573.8114013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QPVKVLGENY_	ENSG00000108883|ENST00000426333|EFTUD2;ENST00000586276.5_1_17:42937766-42940268:-|nuORF;ENST00000590367.5_1_17:42931463-42950195:-|nuORF;nc|ENSG00000108883|Q15029-2|EFTUD2;nc|ENSG00000108883|Q15029-3|EFTUD2	37.81151784470057	0.569310847604193	3				NaN	NaN	0	NaN	6548	4664	11213
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11215	33.426	NaN	1732.8	30	0	237.56	0.106	+			17143	HSSVPEALMY	10	54	567.2685759110659	1132.5225988889317	2	567.2689819335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HSSVPEALMY_	ENSG00000100985|ENST00000372330|MMP9	42.396135135203025	0.5270658956260207	3				NaN	NaN	0	NaN	6549	4664	11213
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11216	33.428	NaN	1168.9	30	0	83.965	0.106	+			41731	SVSGMFLVA	9	53	455.73893261344494	909.4633122936899	2	455.7387390136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVSGMFLVA_	TM7SF3|p.G358S|1|0.37|ENSG00000064115|chr12:26979901-26979901|C/T|missense_variant	37.15910966729921	0.4535818937225704	3				NaN	NaN	0	NaN	6550	4664	11213
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11217	33.43	NaN	1545.7	30	0	143.81	0.037				-1	TACECVRSPR	10	59	589.7750680045177	1177.5355830758353	2	589.774169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_TAC(Carbamidomethyl (C))ECVRSPR_	ENSG00000110756|ENST00000349215|HPS5;ENST00000352460.7_1_11:18303495-18317646:-|nuORF;nc|ENSG00000110756|Q9UPZ3-2|HPS5	31.529811441608018	0.6223461015008678	3				NaN	NaN	0	NaN	6551	4664	11213
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11221	33.444	NaN	1442.6	30	0	191.4	0.214	+			46146	VDQVTKAGP	9	50	457.7505374226357	NaN	0	457.7505798339844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VDQVTKAGP_	SLC6A7|p.A360T|1|0.15|ENSG00000011083|chr5:150202694-150202694|G/A|missense_variant	40.77816245573522	0.2702456086868081	3				NaN	NaN	0	NaN	6552	4667	11220
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11222	33.448	NaN	2460.2	30	0	383	0.106	+			26209	LSSDKFIPL	9	61	510.29234296242066	1018.5701329916413	2	510.2921447753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSSDKFIPL_	tr|U7SUG5|U7SUG5_FUSNU3-dehydroquinatesynthaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=aroBPE=3SV=1	51.33545320467046	0.2872990594074956	3				NaN	NaN	0	NaN	6553	4667	11220
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11223	33.45	NaN	2886.4	30	0	356.87	0.106	+			787	AEFDTPGHTL	10	71	544.2570677517643	NaN	0	544.25732421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEFDTPGHTL_	ENSG00000213614|ENST00000268097|HEXA;ENST00000563762.5_1_15:72640446-72647950:-|nuORF;ENST00000566672.5_1_15:72638574-72647950:-|nuORF;ENST00000568777.5_1_15:72638642-72646100:-|nuORF;nc|ENSG00000213614|P06865-2|HEXA	45.97224482568171	0.33106653400957564	3				NaN	NaN	0	NaN	6554	4667	11220
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11224	33.451	NaN	2381.5	30	0	343.75	0.106				-1	 	0	67	549.2394906318076	548.2322141652076	1	549.2410278320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	6555	4667	11220
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11225	33.453	NaN	2086.3	30	0	634.32	0.106			+	35564	SAWRSLEVK	9	43	359.20165290273445	1074.5831293084034	3	359.20147705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SAWRSLEVK_	REV__ENST00000602404.5_1_22:42481673-42481847:-|nuORF	45.97224482568171	0.3502073465782774	3				NaN	NaN	0	NaN	6556	4667	11220
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11226	33.455	NaN	1940.3	30	0	114.69	0.106	+			50492	YALQVHCY	8	67	527.2453006075409	1052.4760482818817	2	527.2451782226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_YALQVHC(Carbamidomethyl (C))Y_	ENSG00000110321|ENST00000339995|EIF4G2;ENST00000525606.5_1_11:10819365-10820979:-|nuORF;ENST00000534470.1_1_11:10820460-10820850:-|nuORF;nc|ENSG00000110321|P78344-2|EIF4G2	90.93900077235594	0.2746275503875687	3				NaN	NaN	0	NaN	6557	4667	11220
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11227	33.457	NaN	2047.3	30	0	172.7	0.036	+			35436	SASDLRWLK	9	61	538.2989864346538	1074.5834199361075	2	538.2988891601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SASDLRWLK_	ENST00000312037.5_1_5:149826506-149829126:-|nuORF;ENST00000407193.5_1_5:149826506-149829126:-|nuORF	47.95952297671804	0.32689736945648856	3				NaN	NaN	0	NaN	6558	4667	11220
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11232	33.471	NaN	3223.1	30	0	505.01	0.214	+			14772	GTKYIFMVK	9	42	362.87229176816595	1085.5950459046978	3	362.8718566894531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTKYIFMVK_	ENSG00000101871|ENST00000317552|MID1;nc|ENSG00000101871|O15344-2|MID1	33.921630207806714	0.48623198279849766	3				NaN	NaN	0	NaN	6560	4670	11231
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11233	33.475	NaN	3195.6	30	0	528.95	0.034	+			13201	GIATTFINK	9	62	482.77712839557887	963.5397038579578	2	482.7763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GIATTFINK_	ENSG00000183258|ENST00000330503|DDX41;ENST00000503078.5_1_5:176938794-176943460:-|nuORF;ENST00000505081.5_1_5:176938794-176940626:-|nuORF;ENST00000507900.5_1_5:176938794-176942272:-|nuORF	71.87747018426188	0.13267044672804276	3				NaN	NaN	0	NaN	6561	4670	11231
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11241	33.493	NaN	6230.6	30	0	1073.9	0.214	+			24251	LETLGQEKL	9	63	515.792706139988	1029.570859346776	2	515.7927856445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LETLGQEKL_	CON__H-INV:HIT000292931;CON__P05787;CON__Q9H552;ENSG00000170421|ENST00000692008|KRT8;ENST00000409686.2_1_9:102067468-102068890:+|nuORF;ENST00000450021.1_1_2:183936291-183936849:-|nuORF;ENST00000515599.1_1_5:146086275-146086944:-|nuORF;ENST00000550170.5_1_12:53294858-53298765:-|nuORF;ENST00000562022.1_1_15:43093683-43094592:-|nuORF;ENST00000562317.1_1_16:78082520-78083381:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	138.06239232086	0.011389075116295402	3				NaN	NaN	0	NaN	6566	4673	11240
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11242	33.497	NaN	2816.6	30	0	728.09	0.106	+			47128	VLPERYSSL	9	61	532.2932384052671	1062.571923877334	2	532.2933349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VLPERYSSL_	ENSG00000164219|ENST00000419445|PGGT1B;ENST00000503638.1_1_5:114588828-114598548:-|nuORF;nc|ENSG00000164219|P53609-2|PGGT1B;PGGT1B|p.S241Ffs*25|1|0.36|ENSG00000164219|chr5:115221945-115221946|-/A|frameshift_variant	36.446750945000026	0.4619375763483977	3				NaN	NaN	0	NaN	6567	4673	11240
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11243	33.499	NaN	6965.6	30	0	2439.4	0.106			+	43069	TELLRKII	8	58	329.21847351071665	984.6335911323499	3	329.2185363769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TELLRKII_	REV__ENSG00000179603|ENST00000339582|GRM8;REV__GRM8|p.H720Tfs*12|3|0.42|ENSG00000179603|chr7:126533224-126533224|G/-|frameshift_variant;REV__GRM8|p.K296Nfs*2|1|0.58|ENSG00000179603|chr7:126904102-126904102|T/-|frameshift_variant;REV__GRM8|p.L297Tfs*14|1|0.43|ENSG00000179603|chr7:126904101-126904102|-/T|frameshift_variant;REV__GRM8|p.M502Sfs*7|1|0.05|ENSG00000179603|chr7:126533878-126533879|-/CAGA|frameshift_variant;REV__nc|ENSG00000179603|O00222-2|GRM8;REV__nc|ENSG00000179603|O00222-3|GRM8	37.028477286268924	0.6747514403204248	3				NaN	NaN	0	NaN	6568	4673	11240
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11244	33.5	NaN	1697.6	30	0	209.21	0.106	+			13412	GLFYVFGIIL	10	62	571.3346792198968	1140.6548055065934	2	571.3341064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GLFYVFGIIL_	ENSG00000120942|ENST00000376810|UBIAD1	35.200714571348534	0.5923680232273616	3				NaN	NaN	0	NaN	6569	4673	11240
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11245	33.502	NaN	4010.4	30	0	347.44	0.106	+			31970	QQVPFRVPP	9	70	534.304557608143	1066.594562283086	2	534.3046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QQVPFRVPP_	ENST00000474135.1_1_7:150747249-150747845:+|nuORF	31.954861631926434	0.5046124803899898	3				NaN	NaN	0	NaN	6570	4673	11240
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11246	33.504	NaN	3216.9	30	0	239.76	0.106				-1	KKKCLPPSE	9	74	543.8029881335233	1085.5914233338465	2	543.8035278320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_KKKC(Carbamidomethyl (C))LPPSE_	ENSG00000011007|ENST00000613537|ELOA;nc|ENSG00000011007|Q14241-1|ELOA;TCEB3|p.N465Kfs*2|1|0.27|ENSG00000011007|chr1:23751913-23751914|-/A|frameshift_variant;TCEB3|p.N587Tfs*32|1|0.47|ENSG00000011007|chr1:23754240-23754240|A/-|frameshift_variant	47.657333605630114	0.33044192980041115	3				NaN	NaN	0	NaN	6571	4673	11240
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11247	33.506	NaN	1839.9	30	0	221.04	0.035	+			45849	VALHVNIVN	9	60	489.79123696528313	977.5679209973663	2	489.7904052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VALHVNIVN_	chr6:135201749-135202414|375|10.11|0.42|4.6|+|ENST00000616088|MYB,MYB;ENSG00000118513|ENST00000341911|MYB;nc|ENSG00000118513|P10242-10|MYB;nc|ENSG00000118513|P10242-11|MYB;nc|ENSG00000118513|P10242-12|MYB;nc|ENSG00000118513|P10242-2|MYB;nc|ENSG00000118513|P10242-3|MYB;nc|ENSG00000118513|P10242-5|MYB;nc|ENSG00000118513|P10242-6|MYB;nc|ENSG00000118513|P10242-7|MYB;nc|ENSG00000118513|P10242-8|MYB;nc|ENSG00000118513|P10242-9|MYB;nc|ENSG00000118513|P10242|MYB	45.97224482568171	0.3502073465782774	3				NaN	NaN	0	NaN	6572	4673	11240
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11252	33.52	NaN	47060	30	0	17270	0.214			+	18164	ILRASTLLV	9	89	329.21847351071665	984.6335911323499	3	329.2182312011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ILRASTLLV_	REV__ENST00000295736.9_1_3:27463260-27465574:-|nuORF	42.47446043378293	0.39123495718708534	3				NaN	NaN	0	NaN	6574	4676	11251
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11253	33.523	NaN	15723	30	0	4823.8	0.106	+			40350	STTQVVGILK	10	69	523.3162013249307	1044.6178497166613	2	523.3165283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STTQVVGILK_	ENSG00000198898|ENST00000361183|CAPZA2;ENST00000426421.5_1_7:116544367-116557918:+|nuORF	152.06079943815163	0.008129625933261015	3				NaN	NaN	0	NaN	6575	4676	11251
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11254	33.525	NaN	4761.1	30	0	588.98	0.106			+	47800	VSIHPLSAY	9	64	493.7687502905177	985.5229476478354	2	493.7685852050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSIHPLSAY_	REV__ENSG00000115266|ENST00000590469|APC2;REV__nc|ENSG00000115266|O95996-2|APC2;REV__nc|ENSG00000115266|O95996-3|APC2	53.351449002276354	0.2690372970092375	3				NaN	NaN	0	NaN	6576	4676	11251
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11255	33.527	NaN	3830.5	30	0	436.4	0.106	+			49969	WAEEGQRVL	9	70	544.2801946685946	1086.5458364039891	2	544.2803955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_WAEEGQRVL_	ENSG00000196155|ENST00000379344|PLEKHG4;ENST00000563969.5_1_16:67314567-67322708:+|nuORF;nc|ENSG00000196155|Q58EX7-2|PLEKHG4;PLEKHG4|p.L616Wfs*32|1|0.43|ENSG00000196155|chr16:67284862-67284862|G/-|frameshift_variant	68.84614121027924	0.14577793175421136	3				NaN	NaN	0	NaN	6577	4676	11251
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11256	33.529	NaN	3734.4	30	0	1343.4	0.106				-1	SVMIKKSHQVL	11	49	429.24832608570233	1284.723148857307	3	429.2477722167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_SVM(Oxidation (M))IKKSHQVL_	HMGCLL1|p.K268Ifs*21|1|0.07|ENSG00000146151|chr6:55495501-55495502|-/TA|frameshift_variant	23.37791116691581	0.7445759747191538	3				NaN	NaN	0	NaN	6578	4676	11251
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11257	33.531	NaN	3673.2	30	0	472	0.106			+	10852	FATHPTTGL	9	57	472.7458606761207	943.4771684190414	2	472.7455749511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FATHPTTGL_	REV__ENST00000478742.1_1_1:203148575-203149107:-|nuORF	38.80614096846853	0.43426287593479557	3				NaN	NaN	0	NaN	6579	4676	11251
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11258	33.532	NaN	1610.5	30	0	244.22	0.035	+			12315	GDFKEISSV	9	51	491.247587192328	NaN	0	491.24761962890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GDFKEISSV_	ENSG00000148773|ENST00000368654|MKI67;MKI67|p.K319Rfs*27|1|0.35|ENSG00000148773|chr10:128115454-128115454|C/-|frameshift_variant;MKI67|p.L2374*|1|0.28|ENSG00000148773|chr10:128104719-128104719|A/-|frameshift_variant;MKI67|p.L783Hfs*49|1|0.05|ENSG00000148773|chr10:128110447-128110448|-/TG|frameshift_variant;MKI67|p.L783Yfs*49|1|0.05|ENSG00000148773|chr10:128110446-128110447|-/GT|frameshift_variant;MKI67|p.R3036Yfs*27|1|0.04|ENSG00000148773|chr10:128102735-128102736|-/AAAATAA|frameshift_variant;MKI67|p.T672Nfs*4|1|0.25|ENSG00000148773|chr10:128112000-128112001|-/T|frameshift_variant	71.87747018426188	0.0992163553043454	3				NaN	NaN	0	NaN	6580	4676	11251
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11264	33.548	NaN	9062.9	30	0	1011.2	0.214	+			44315	TSFDGSLIQK	10	72	548.2886076807423	1094.5626624282845	2	548.2879638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSFDGSLIQK_	ENSG00000177485|ENST00000557385|ZBTB33	128.60217544463768	0.01518043149187549	3				NaN	NaN	0	NaN	6583	4679	11263
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11265	33.552	NaN	11793	30	0	1338.7	0.106	+			29166	NVIRDAVTY	9	78	525.782426847918	1049.550300762636	2	525.7830200195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NVIRDAVTY_	ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2	98.58198989935565	0.04066992115528678	3				NaN	NaN	0	NaN	6584	4679	11263
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11266	33.554	NaN	1548.4	30	0	304.19	0.106	+			26718	LVKPRLLE	8	31	323.21491482234967	966.6229150672491	3	323.21478271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LVKPRLLE_	ENSG00000139636|ENST00000267102|LMBR1L;ENST00000547670.5_1_12:49494396-49503620:-|nuORF;ENST00000550867.5_1_12:49494935-49504419:-|nuORF;ENST00000552141.5_1_12:49495806-49497560:-|nuORF;ENST00000552879.5_1_12:49494935-49496886:-|nuORF;nc|ENSG00000139636|Q6UX01-2|LMBR1L;nc|ENSG00000139636|Q6UX01-3|LMBR1L;nc|ENSG00000139636|Q6UX01-4|LMBR1L;nc|ENSG00000139636|Q6UX01-5|LMBR1L	31.954861631926434	0.7126016770032289	3				NaN	NaN	0	NaN	6585	4679	11263
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11267	33.556	NaN	1418.2	30	0	236.94	0.106				-1	 	0	39	378.27878380145216	754.5430146697043	2	378.2783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	6586	4679	11263
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11268	33.557	NaN	7455.2	30	0	824.97	0.106	+			46557	VFIDKQTNL	9	74	539.3010697407209	1076.5875865482417	2	539.30078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VFIDKQTNL_	ENSG00000048740|ENST00000633077|CELF2;ENSG00000149187|ENST00000687097|CELF1;nc|ENSG00000048740|O95319-2|CELF2;nc|ENSG00000048740|O95319-3|CELF2;nc|ENSG00000048740|O95319-4|CELF2;nc|ENSG00000048740|O95319-5|CELF2;nc|ENSG00000048740|O95319|CELF2;nc|ENSG00000149187|Q92879-2|CELF1;nc|ENSG00000149187|Q92879-3|CELF1;nc|ENSG00000149187|Q92879-4|CELF1;nc|ENSG00000149187|Q92879-5|CELF1;nc|ENSG00000149187|Q92879-6|CELF1;nc|ENSG00000149187|Q92879|CELF1	109.47833844074708	0.029530294723441826	3				NaN	NaN	0	NaN	6587	4679	11263
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11269	33.559	NaN	3860.7	30	0	460.32	0.106			+	29640	PGGWGGLTSL	10	55	472.7458606761207	943.4771684190414	2	472.7451477050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PGGWGGLTSL_	REV__ENST00000598273.5_1_19:48283225-48283447:+|nuORF	53.351449002276354	0.42630798468005626	3				NaN	NaN	0	NaN	6588	4679	11263
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11270	33.561	NaN	5395	30	0	3048.9	0.033			+	28592	NKLIKVAV	8	56	442.8001814381353	883.5858099430707	2	442.7998962402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NKLIKVAV_	REV__ENSG00000165025|ENST00000375754|SYK;REV__nc|ENSG00000165025|P43405-2|SYK;REV__SYK|p.E442Sfs*31|1|0.11|ENSG00000165025|chr9:90877711-90877711|C/-|frameshift_variant;REV__SYK|p.S553Afs*9|1|0.05|ENSG00000165025|chr9:90887821-90887821|A/-|frameshift_variant	71.37791200682192	0.3954169775488141	3				NaN	NaN	0	NaN	6589	4679	11263
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11275	33.575	NaN	2330.4	30	0	648.91	0.214	+			19015	IWEEIQIK	8	67	529.7965819896032	NaN	0	529.7965698242188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IWEEIQIK_	nc|ENSG00000152404|Q2TBE0-2|CWF19L2	53.351449002276354	1.7418937515398478	3				NaN	NaN	0	NaN	6591	4682	11274
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11276	33.579	NaN	2161.1	30	0	455.92	0.106	+			24029	LEEREVLL	8	55	500.78746442716795	999.5603759211359	2	500.78692626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LEEREVLL_	ENSG00000165923|ENST00000525123|AGBL2;ENST00000529712.5_1_11:47690447-47736202:-|nuORF;nc|ENSG00000165923|Q5U5Z8-2|AGBL2	42.396135135203025	0.6414440140393314	3				NaN	NaN	0	NaN	6592	4682	11274
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11277	33.581	NaN	1542	30	0	223.19	0.106	+			7143	DACTLAEKY	9	62	507.234096346338	1012.453639759476	2	507.2334899902344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DACTLAEKY_	ENSG00000146955|ENST00000537763|RAB19;nc|ENSG00000146955|A4D1S5-2|RAB19	45.02220120713402	0.3613509778819777	3				NaN	NaN	0	NaN	6593	4682	11274
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11278	33.583	NaN	1112.3	30	0	164.56	0.106				-1	KAVYEKMFL	9	37	382.2072300649866	NaN	0	382.2070617675781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_KAVYEKM(Oxidation (M))FL_	ENSG00000006788|ENST00000252172|MYH13;ENSG00000125414|ENST00000245503|MYH2;ENSG00000133020|ENST00000403437|MYH8;MYH13|p.K1396Nfs*37|1|0.46|ENSG00000006788|chr17:10312751-10312751|T/-|frameshift_variant;MYH2|p.R876Gfs*9|1|0.36|ENSG00000125414|chr17:10531704-10531704|T/-|frameshift_variant;MYH8|p.E1123Gfs*19|1|0.39|ENSG00000133020|chr17:10400757-10400758|-/C|frameshift_variant;MYH8|p.I922Nfs*6|1|0.33|ENSG00000133020|chr17:10401709-10401710|-/T|frameshift_variant;MYH8|p.K1582Nfs*3|1|0.04|ENSG00000133020|chr17:10395349-10395350|-/G|frameshift_variant;MYH8|p.N600Ifs*5|1|0.32|ENSG00000133020|chr17:10409377-10409377|T/-|frameshift_variant;nc|ENSG00000125414|Q9UKX2-2|MYH2	24.519189625965996	0.35377483217337163	3				NaN	NaN	0	NaN	6594	4682	11274
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11279	33.584	NaN	1014.4	30	0	68.961	0.106	+			7162	DAFLWNGS	8	51	455.2089384714793	908.4033240097586	2	455.20831298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DAFLWNGS_	ENSG00000136040|ENST00000258526|PLXNC1;PLXNC1|p.C506Vfs*3|1|0.22|ENSG00000136040|chr12:94209658-94209659|-/A|frameshift_variant;PLXNC1|p.D901Rfs*10|1|0.03|ENSG00000136040|chr12:94248333-94248334|-/G|frameshift_variant;PLXNC1|p.I1400Sfs*21|1|0.37|ENSG00000136040|chr12:94298749-94298749|A/-|frameshift_variant;PLXNC1|p.L809*|1|0.11|ENSG00000136040|chr12:94247936-94247936|T/-|frameshift_variant	40.5726180659479	0.6527593143185008	3				NaN	NaN	0	NaN	6595	4682	11274
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11280	33.586	NaN	1304.3	30	0	90.099	0.106			+	28559	NKASGQALAL	10	56	486.7783782142407	NaN	0	486.7784118652344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NKASGQALAL_	REV__SLC26A7|p.K333Nfs*20|5|0.37|ENSG00000147606|chr8:91340519-91340519|A/-|frameshift_variant	36.446750945000026	0.3805027428805705	3				NaN	NaN	0	NaN	6596	4682	11274
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11281	33.588	NaN	1190.5	30	0	118.4	0.035	+			47238	VMNFQLLN	8	53	489.7584862839142	977.5024196346284	2	489.75775146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VMNFQLLN_	ENST00000567514.1_1_3:12602292-12602403:-|nuORF	42.47446043378293	0.6409579893742323	3				NaN	NaN	0	NaN	6597	4682	11274
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11291	33.61	NaN	31586	30	0	2937.8	0.214	+			6680	AYVHMVTHF	9	92	552.7685585700301	1103.5225642068601	2	552.7692260742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AYVHMVTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	180.49460243208492	0.0012463884455128954	3				NaN	NaN	0	NaN	6604	4685	11290
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11292	33.614	NaN	17835	30	0	6417.7	0.106	+			5212	ATTSVITIVK	10	81	516.8189733126212	1031.6233936920423	2	516.8192138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATTSVITIVK_	ENSG00000198517|ENST00000343242|MAFK	101.45984612302182	0.07336148045341315	3				NaN	NaN	0	NaN	6605	4685	11290
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11293	33.616	NaN	8765.1	30	0	1209.7	0.106	+			45744	VADTVARVL	9	61	472.28246181478204	942.5503706963641	2	472.2821044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VADTVARVL_	ENSG00000145632|ENST00000274289|PLK2	95.81516180277367	0.04847050768394289	3				NaN	NaN	0	NaN	6606	4685	11290
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11294	33.617	NaN	3178	30	0	722.18	0.106	+			27025	LYSQATGVV	9	61	469.2531282190065	NaN	0	469.2532958984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LYSQATGVV_	TTLL5|p.V1126L|1|0.71|ENSG00000119685|chr14:75863716-75863716|G/T|missense_variant	42.396135135203025	0.2590952873412954	3				NaN	NaN	0	NaN	6607	4685	11290
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11295	33.619	NaN	3526.1	30	0	639.94	0.106			+	1227	AEQRVVAP	8	50	435.24575437227634	868.4769558113527	2	435.2456970214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEQRVVAP_	REV__ENST00000484092.1_1_3:117716162-117716402:-|nuORF	50.0245360154114	0.5941082100236891	3				NaN	NaN	0	NaN	6608	4685	11290
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11296	33.621	NaN	3187.4	30	0	524.09	0.035			+	7405	DEHAVRFQ	8	67	501.24369356261406	1000.4728341920281	2	501.2438049316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DEHAVRFQ_	REV__ENSG00000164610|ENST00000297157|RP9;REV__ENST00000450133.5_1_7:32956958-32982633:-|nuORF	42.47446043378293	0.6409579893742323	3				NaN	NaN	0	NaN	6609	4685	11290
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11297	33.622	NaN	1520.5	30	0	250.66	0.14			+	31994	QRGMKTWT	8	53	504.25595995950454	NaN	0	504.25634765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QRGMKTWT_	REV__ENST00000568012.5_1_16:30505673-30506106:+|nuORF	35.61828744233558	1.7418937515398478	3				NaN	NaN	0	NaN	6610	4685	11290
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11311	33.66	NaN	9027.7	30	0	1671.8	0.215	+			4815	ATNTVYVFAK	10	71	557.3005482798231	1112.5865436264462	2	557.3005981445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATNTVYVFAK_	ENSG00000047315|ENST00000314595|POLR2B;POLR2B|p.A362Pfs*21|1|0.34|ENSG00000047315|chr4:57005423-57005423|A/-|frameshift_variant;POLR2B|p.K211Rfs*66|1|0.1|ENSG00000047315|chr4:56995302-56995302|A/-|frameshift_variant;POLR2B|p.N1030Sfs*23|1|0.07|ENSG00000047315|chr4:57025384-57025385|-/CT|frameshift_variant;POLR2B|p.P303Tfs*5|1|0.16|ENSG00000047315|chr4:57005248-57005249|-/A|frameshift_variant	142.36107225718385	0.01012457621782354	3				NaN	NaN	0	NaN	6618	4691	11310
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11312	33.663	NaN	7183.8	30	0	483.5	0.106	+			36461	SEVMGEPHL	9	74	499.7345066729866	997.4544604127732	2	499.733642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEVMGEPHL_	ENSG00000132963|ENST00000380842|POMP	53.351449002276354	0.2690372970092375	3				NaN	NaN	0	NaN	6619	4691	11310
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11313	33.665	NaN	2790.4	30	0	305.04	0.106	+			632	ADVRFRPV	8	63	480.27442507820433	958.5342972232087	2	480.27374267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ADVRFRPV_	ENST00000571710.5_1_17:1945213-1945339:+|nuORF	63.30626980617807	0.4690498839812213	3				NaN	NaN	0	NaN	6620	4691	11310
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11314	33.667	NaN	2016.3	30	0	186.09	0.106	+			16283	HEGLVLTKL	9	61	505.30541277488385	NaN	0	505.3051452636719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HEGLVLTKL_	ENSG00000149932|ENST00000279396|TMEM219	44.377184641726394	0.24544280798894275	3				NaN	NaN	0	NaN	6621	4691	11310
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11315	33.669	NaN	2226.7	30	0	348.76	0.033			+	24413	LGALLRQL	8	50	442.28957408809526	NaN	0	442.28955078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LGALLRQL_	REV__ENST00000344575.4_1_7:72848585-72849218:+|nuORF	74.51659920185547	1.7418937515398478	3				NaN	NaN	0	NaN	6622	4691	11310
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11319	33.682	NaN	2496.8	30	0	264.21	0.214			+	18230	INNFSKSVL	9	56	511.2873621195826	1020.5601713059652	2	511.28680419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_INNFSKSVL_	REV__ENST00000604660.1_1_4:185428414-185430663:-|nuORF	56.72105179125745	0.24094814563026265	3				NaN	NaN	0	NaN	6623	4694	11318
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11320	33.686	NaN	1551.4	30	0	115.74	0.106			+	1423	AEWYKELDSNI	11	66	684.326550928225	NaN	0	684.326416015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEWYKELDSNI_	REV__nc|ENSG00000145014|Q2T9K0-7|TMEM44	37.50817390946774	0.39825797133360086	3				NaN	NaN	0	NaN	6624	4694	11318
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11321	33.688	NaN	1113	30	0	77.504	0.106	+			25759	LSAGLGPGLL	10	48	449.27394084238665	896.5333287515733	2	449.2737121582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSAGLGPGLL_	ENSG00000135912|ENST00000392102|TTLL4;TTLL4|p.S144Kfs*71|1|0.21|ENSG00000135912|chr2:218738100-218738101|-/A|frameshift_variant	42.396135135203025	0.5270658956260207	3				NaN	NaN	0	NaN	6625	4694	11318
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11322	33.69	NaN	1087.8	30	0	196.71	0.106	+			43342	TGATLYLLR	9	35	336.53440929680414	1006.5813984906124	3	336.868408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TGATLYLLR_	ENSG00000189043|ENST00000339600|NDUFA4;ENST00000486007.1_1_7:10977674-10979684:-|nuORF;NDUFA4|p.A37T|1|0.4|ENSG00000189043|chr7:10938830-10938830|C/T|missense_variant	24.20275056022122	0.577060078256802	3				NaN	NaN	0	NaN	6626	4694	11318
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11323	33.692	NaN	1577.8	30	0	166.8	0.106	+			30128	PRRISVSR	8	59	485.7992228996511	969.5838928661022	2	486.3017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PRRISVSR_	ENSG00000114541|ENST00000398540|FRMD4B;ENST00000497475.5_1_3:69245990-69247907:-|nuORF;nc|ENSG00000114541|Q9Y2L6-2|FRMD4B	26.69291269510374	0.7532304684939817	3				NaN	NaN	0	NaN	6627	4694	11318
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11324	33.693	NaN	1317.7	30	0	107.79	0.034			+	8359	EALILHLL	8	54	461.29194199426416	NaN	0	461.29205322265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EALILHLL_	REV__ENST00000393110.6_1_2:120021396-120021600:+|nuORF	37.028477286268924	1.7418937515398478	3				NaN	NaN	0	NaN	6628	4694	11318
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11329	33.708	NaN	4186	30	0	934.14	0.214	+			4639	ATLPPITVTSK	11	61	564.337366929102	1126.660180925004	2	564.3372802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATLPPITVTSK_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	25.125986553469783	0.7262400895305658	3				NaN	NaN	0	NaN	6630	4697	11328
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11330	33.712	NaN	1062.8	30	0	173.75	0.106				-1	 	0	37	341.71589566327214	NaN	0	341.71575927734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	6631	4697	11328
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11331	33.714	NaN	1597.6	30	0	150.88	0.035	+			25723	LRRAPRGSP	9	64	505.30541277488385	NaN	0	505.3053283691406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LRRAPRGSP_	nc|ENSG00000130821|P48029-2|SLC6A8	24.20275056022122	0.35506675290109213	3				NaN	NaN	0	NaN	6632	4697	11328
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11339	33.734	NaN	3969.1	30	0	415.45	0.214	+			25475	LPRVTSEY	8	65	482.7590567443142	963.5035605554284	2	482.7586669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LPRVTSEY_	ENST00000489585.5_1_1:236046543-236046774:-|nuORF	65.80317337860623	0.44433089765398776	3				NaN	NaN	0	NaN	6637	4700	11338
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11340	33.738	NaN	4663	30	0	876.67	0.106				-1	 	0	70	558.2492200451707	1114.4838871571412	2	558.2496337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	6638	4700	11338
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11341	33.74	NaN	4234.2	30	0	774.72	0.106			+	36918	SIISLDLFH	9	69	522.7899687847105	1043.5653846362209	2	522.7896728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SIISLDLFH_	REV__ZMYM1|p.R756Sfs*8|1|0.05|ENSG00000197056|chr1:35114097-35114098|-/TGGTGCTATCATA|frameshift_variant	47.91560031466742	0.327412564698279	3				NaN	NaN	0	NaN	6639	4700	11338
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11342	33.742	NaN	1322.8	30	0	94.454	0.106				-1	DDDEPCKKC	9	64	583.7287906838127	1165.4430284344253	2	583.7271728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_DDDEPC(Carbamidomethyl (C))KKC(Carbamidomethyl (C))_	ENSG00000048649|ENST00000308488|RSF1;nc|ENSG00000048649|Q96T23-2|RSF1;nc|ENSG00000048649|Q96T23-3|RSF1	29.14955571784316	0.5308295550522326	3				NaN	NaN	0	NaN	6640	4700	11338
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11343	33.743	NaN	4343.5	30	0	491.15	0.106	+			17803	IEVENKEVL	9	64	536.7985706677533	1071.5825884023066	2	536.7984008789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IEVENKEVL_	ENSG00000173193|ENST00000474629|PARP14;nc|ENSG00000173193|Q460N5-1|PARP14;nc|ENSG00000173193|Q460N5-3|PARP14;nc|ENSG00000173193|Q460N5-4|PARP14;PARP14|p.N1416Efs*19|1|0.2|ENSG00000173193|chr3:122718388-122718389|-/A|frameshift_variant	91.26522074875469	0.06129826844580791	3				NaN	NaN	0	NaN	6641	4700	11338
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11344	33.745	NaN	1579.2	30	0	205.55	0.035	+			8841	EELSRTKF	8	50	505.27005004887894	1008.5255471645579	2	505.2703857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EELSRTKF_	DCP2|p.K267E|1|0.14|ENSG00000172795|chr5:113001667-113001667|A/G|missense_variant	40.77816245573522	0.6514838689002179	3				NaN	NaN	0	NaN	6642	4700	11338
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11349	33.76	NaN	4529.5	30	0	561.17	0.214	+			20818	KIFSGVFVK	9	67	512.8133157238901	1023.6120785145803	2	512.8131713867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KIFSGVFVK_	ENSG00000146223|ENST00000493763|RPL7L1;ENST00000397415.7_1_6:42848808-42854199:+|nuORF;ENST00000462348.1_1_6:42848614-42854030:+|nuORF;ENST00000530523.1_1_8:42580956-42581139:-|nuORF;nc|ENSG00000146223|Q6DKI1-2|RPL7L1;RPL7L1|p.Q126Pfs*38|1|0.24|ENSG00000146223|chr6:42884698-42884699|-/C|frameshift_variant	117.81106730687013	0.02252488733980868	3				NaN	NaN	0	NaN	6644	4703	11348
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11350	33.763	NaN	2515.7	30	0	317.29	0.106	+			12450	GEDEPLHAL	9	60	490.7380877261596	979.4616225191193	2	490.7376708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEDEPLHAL_	ENSG00000168066|ENST00000377390|SF1;nc|ENSG00000168066|Q15637-2|SF1;nc|ENSG00000168066|Q15637-3|SF1;nc|ENSG00000168066|Q15637-4|SF1;nc|ENSG00000168066|Q15637-5|SF1;nc|ENSG00000168066|Q15637-6|SF1;nc|ENSG00000168066|Q15637-7|SF1;SF1|p.V573Sfs*23|1|0.22|ENSG00000168066|chr11:64766025-64766025|G/-|frameshift_variant	110.33723246496265	0.028653888678955353	3				NaN	NaN	0	NaN	6645	4703	11348
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11351	33.765	NaN	3998.9	30	0	613.95	0.106			+	26261	LSSVVEKIY	9	69	519.2977113580131	1036.580869782826	2	519.2981567382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSSVVEKIY_	REV__tr|U7T180|U7T180_FUSNUValine--tRNAligaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=valSPE=3SV=1	84.9155231211612	0.07920012719736333	3				NaN	NaN	0	NaN	6646	4703	11348
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11352	33.767	NaN	1113.8	30	0	461.36	0.106			+	-1	TVTRMRKH	8	31	348.8623788053206	1043.5653070161618	3	348.8618469238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_TVTRM(Oxidation (M))RKH_	REV__ENSG00000115353|ENST00000305249|TACR1;REV__ENSG00000169836|ENST00000304883|TACR3;REV__nc|ENSG00000115353|P25103-3|TACR1;REV__TACR1|p.F325Sfs*12|1|0.24|ENSG00000115353|chr2:75049684-75049684|G/-|frameshift_variant	24.20275056022122	0.7724576178584145	3				NaN	NaN	0	NaN	6647	4703	11348
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11353	33.769	NaN	1794.8	30	0	380.17	0.106			+	43840	TLSVWFISW	9	64	569.7981265424862	1137.5817001517723	2	569.7981567382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TLSVWFISW_	REV__ENST00000355947.6_1_7:99489545-99489743:-|nuORF	38.80614096846853	0.43426287593479557	3				NaN	NaN	0	NaN	6648	4703	11348
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11354	33.771	NaN	2897	30	0	221.52	0.106	+			44102	TPVGLIVSH	9	60	461.7714499705975	921.528347007995	2	461.7708740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TPVGLIVSH_	ENSG00000136718|ENST00000259239|IMP4;ENST00000460766.5_1_2:131100637-131104038:+|nuORF	74.25504064058377	0.12238981753128622	3				NaN	NaN	0	NaN	6649	4703	11348
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11355	33.772	NaN	1524.8	30	0	251.82	0.037			+	26516	LTPSLDRSPPS	11	56	585.3120699089488	1168.6095868846976	2	585.31201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LTPSLDRSPPS_	REV__ENSG00000143079|ENST00000271277|CTTNBP2NL	29.170058357718403	0.683821074385409	3				NaN	NaN	0	NaN	6650	4703	11348
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11363	33.793	NaN	5147.6	30	0	320.62	0.214	+			26078	LSLVKRTDL	9	77	522.8243048277534	1043.6340567223067	2	522.824462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSLVKRTDL_	ENSG00000114107|ENST00000264982|CEP70;ENST00000478673.5_1_3:138250446-138291769:-|nuORF;nc|ENSG00000114107|Q8NHQ1-2|CEP70;nc|ENSG00000114107|Q8NHQ1-3|CEP70;nc|ENSG00000114107|Q8NHQ1-4|CEP70;nc|ENSG00000114107|Q8NHQ1-5|CEP70	52.936696900407355	0.27249468807391813	3				NaN	NaN	0	NaN	6655	4706	11362
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11364	33.797	NaN	14472	30	0	2474.9	0.106	+			36043	SEISNIARV	9	72	494.77516409481063	987.5357752564213	2	494.77447509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEISNIARV_	ENSG00000016490|ENST00000394711|CLCA1	134.7655990226056	0.012935733000282069	3				NaN	NaN	0	NaN	6656	4706	11362
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11365	33.798	NaN	3624.7	30	0	548.22	0.106	+			1249	AERPQEWAM	9	60	559.2572602365126	1116.499967539825	2	559.2576293945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AERPQEWAM_	ENSG00000100906|ENST00000216797|NFKBIA;ENST00000555629.1_1_14:35872865-35873850:-|nuORF;ENST00000557100.5_1_14:35871861-35873850:-|nuORF;ENST00000557459.1_1_14:35872311-35873850:-|nuORF	41.42661286455405	0.403525789677298	3				NaN	NaN	0	NaN	6657	4706	11362
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11366	33.8	NaN	2804.2	30	0	297.96	0.106			+	-1	LTDMKKKES	9	63	548.2886076807423	1094.5626624282845	2	548.2946166992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_LTDM(Oxidation (M))KKKES_	REV__ENST00000513061.1_1_4:172734932-172737255:+|nuORF	40.05817265558897	0.419577045485086	3				NaN	NaN	0	NaN	6658	4706	11362
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11367	33.802	NaN	1367	30	0	203.78	0.106	+			30004	PPITVTSK	8	52	421.7531026063755	841.491652279551	2	421.75244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PPITVTSK_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	62.107414245175825	0.4809183816468817	3				NaN	NaN	0	NaN	6659	4706	11362
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11368	33.804	NaN	787.89	30	0	61.47	0.038	+			45742	VADSSLAL	8	35	388.2120361328125	NaN	0	388.2120361328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VADSSLAL_	ENST00000577698.1_1_17:66243842-66243974:-|nuORF	29.841539824830324	1.7418937515398478	3				NaN	NaN	0	NaN	6660	4706	11362
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11372	33.818	NaN	23618	30	0	6471.7	0.214			+	33885	RRPFGSLLQ	9	87	537.3141835571669	1072.6138141811336	2	537.3141479492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RRPFGSLLQ_	REV__ENSG00000162191|ENST00000301935|UBXN1;REV__nc|ENSG00000162191|Q04323-2|UBXN1	49.44154591367651	0.3095138337212152	3				NaN	NaN	0	NaN	6661	4709	11371
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11373	33.822	NaN	2109.7	30	0	338.58	0.106	+			8401	EAPAHISAM	9	45	463.7235291413876	925.4325053495752	2	463.72344970703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EAPAHISAM_	HS3ST3A1|p.R228H|1|0.24|ENSG00000153976|chr17:13496735-13496735|C/T|missense_variant;HS3ST3B1|p.R213H|1|0.44|ENSG00000125430|chr17:14345111-14345111|G/A|missense_variant	30.503639358989545	0.5181749237905803	3				NaN	NaN	0	NaN	6662	4709	11371
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11374	33.824	NaN	2934.2	30	0	412.91	0.106	+			45628	TYQQVQQTL	9	66	554.7854016945797	1107.5562504559593	2	554.7850341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TYQQVQQTL_	ENSG00000126254|ENST00000262633|RBM42;nc|ENSG00000126254|Q9BTD8-2|RBM42;nc|ENSG00000126254|Q9BTD8-3|RBM42;nc|ENSG00000126254|Q9BTD8-4|RBM42	56.43379154798735	0.2433427591689151	3				NaN	NaN	0	NaN	6663	4709	11371
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11375	33.825	NaN	1377.7	30	0	118.16	0.106	+			21499	KNLISGNI	8	55	429.755946190235	857.4973394472701	2	429.755615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KNLISGNI_	tr|U7STD3|U7STD3_FUSNUElongationfactorPOS=FusobacteriumnucleatumCTI-5OX=1316586GN=efpPE=3SV=1	68.78682469695295	0.41700713582915416	3				NaN	NaN	0	NaN	6664	4709	11371
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11376	33.827	NaN	2361.3	30	0	574.33	0.106			+	7540	DGVGARYVI	9	48	475.2589201723325	948.5032874114651	2	475.2579650878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DGVGARYVI_	REV__ENSG00000134627|ENST00000299001|PIWIL4;REV__PIWIL4|p.V774Wfs*21|1|0.16|ENSG00000134627|chr11:94620021-94620021|G/-|frameshift_variant	32.81241826257853	0.4965981579233955	3				NaN	NaN	0	NaN	6665	4709	11371
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11377	33.829	NaN	1817.3	30	0	321.36	0.106	+			4790	ATNKITIIFK	10	45	383.57280849735594	1147.6965960922678	3	383.57220458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATNKITIIFK_	ENSG00000174136|ENST00000513185|RGMB;RGMB|p.E393Gfs*29|1|0.64|ENSG00000174136|chr5:98793614-98793615|-/G|frameshift_variant	35.17822180527639	0.5925517082438457	3				NaN	NaN	0	NaN	6666	4709	11371
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11378	33.831	NaN	712.9	30	0	60.325	0.04			+	-1	KCEKCVIQNVI	11	44	695.8607788085938	NaN	0	695.8607788085938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C)	_KC(Carbamidomethyl (C))EKC(Carbamidomethyl (C))VIQNVI_	REV__ENSG00000085982|ENST00000678225|USP40;REV__ENST00000427947.7_1_2:234462980-234475343:-|nuORF;REV__ENST00000484528.1_1_2:234465455-234475343:-|nuORF;REV__nc|ENSG00000085982|Q9NVE5-3|USP40;REV__nc|ENSG00000085982|Q9NVE5|USP40;REV__USP40|p.F846Lfs*16|1|0.24|ENSG00000085982|chr2:233510121-233510121|A/-|frameshift_variant;REV__USP40|p.N976Hfs*17|1|0.07|ENSG00000085982|chr2:233491251-233491252|-/TGATATGG|frameshift_variant	16.71738777980365	0.456735970842152	3				NaN	NaN	0	NaN	6667	4709	11371
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11385	33.847	NaN	1696.8	30	0	355.85	0.214	+			17405	IAQEASPR	8	48	436.23534300621714	870.4561330792343	2	436.2353210449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IAQEASPR_	ENSG00000120549|ENST00000376454|KIAA1217;nc|ENSG00000120549|Q5T5P2-3|KIAA1217	79.45101966838831	0.3281480470254892	3				NaN	NaN	0	NaN	6671	4712	11384
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11386	33.851	NaN	1810.6	30	0	604.54	0.106			+	18173	ILTELLRK	8	34	329.21847351071665	984.6335911323499	3	329.21826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ILTELLRK_	REV__ENST00000539332.2_1_11:61070596-61071371:-|nuORF	21.70233525837049	0.7917639344264583	3				NaN	NaN	0	NaN	6672	4712	11384
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11387	33.853	NaN	2807.2	30	0	321.61	0.106			+	39230	STAIVSKQH	9	59	485.7690685739353	NaN	0	485.7694396972656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STAIVSKQH_	REV__ENST00000426826.2_1_1:150026325-150026897:+|nuORF	40.77816245573522	0.2702456086868081	3				NaN	NaN	0	NaN	6673	4712	11384
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11388	33.855	NaN	2610.1	30	0	566.26	0.106	+			6600	AYNPNTQTF	9	65	528.2438832519474	1054.4732135706947	2	528.74609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AYNPNTQTF_	ENSG00000174405|ENST00000442234|LIG4;LIG4|p.L462Ffs*12|1|0.14|ENSG00000174405|chr13:108209883-108209884|-/A|frameshift_variant	53.08895987439943	0.27122541748218487	3				NaN	NaN	0	NaN	6674	4712	11384
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11389	33.856	NaN	658.96	30	0	35.356	0.106				-1	MCTGCCCCCC	10	36	362.74093065519776	NaN	0	362.74066162109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_MCTGCCC(Carbamidomethyl (C))CCC_	ENST00000379661.7_1_16:57770947-57770980:+|nuORF;ENST00000562592.5_1_16:57770947-57775680:+|nuORF;ENST00000566726.5_1_16:57770947-57775680:+|nuORF	2.027967841256958	0.4201028297492154	3				NaN	NaN	0	NaN	6675	4712	11384
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11390	33.858	NaN	2294.1	30	0	253.02	0.106	+			7375	DDPGSNKPL	9	58	471.7302146597526	NaN	0	471.7304382324219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DDPGSNKPL_	ENSG00000151612|ENST00000508784|ZNF827;nc|ENSG00000151612|Q17R98-2|ZNF827;ZNF827|p.S121R|1|0.4|ENSG00000151612|chr4:145902896-145902896|G/T|missense_variant	42.86426827375447	0.2558691296974908	3				NaN	NaN	0	NaN	6676	4712	11384
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11391	33.86	NaN	1382.4	30	0	115.87	0.034			+	26087	LSMLTNNI	8	52	453.24119741777486	904.4678419023497	2	453.24078369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSMLTNNI_	REV__ENSG00000012983|ENST00000682126|MAP4K5;REV__ENST00000554990.5_1_14:50886739-50915587:-|nuORF	35.61828744233558	0.6843154725607303	3				NaN	NaN	0	NaN	6677	4712	11384
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11395	33.874	NaN	3114.9	30	0	700.03	0.214	+			1283	AESKNGWTL	9	72	503.25398287584807	1004.4934128184962	2	503.2529602050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AESKNGWTL_	ENSG00000110048|ENST00000263847|OSBP	42.86426827375447	0.38666266728046506	3				NaN	NaN	0	NaN	6678	4715	11394
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11396	33.877	NaN	2779.3	30	0	326.36	0.034	+			46241	VEDGVLLGAV	10	59	486.2730075854156	NaN	0	486.271484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VEDGVLLGAV_	ENSG00000137809|ENST00000315757|ITGA11;nc|ENSG00000137809|Q9UKX5-2|ITGA11	51.33545320467046	0.297159550775418	3				NaN	NaN	0	NaN	6679	4715	11394
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11404	33.895	NaN	7922.5	30	0	1025.5	0.214	+			29167	NVIRDAVTY	9	67	525.782426847918	1049.550300762636	2	525.782958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NVIRDAVTY_	ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2	70.8162118820467	0.13725933411854815	3				NaN	NaN	0	NaN	6684	4718	11403
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11405	33.899	NaN	4053.5	30	0	712.71	0.106	+			15893	HAAGFAYTY	9	64	500.7300522763828	999.4455516195657	2	500.7294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HAAGFAYTY_	ENSG00000166801|ENST00000675163|FAM111A	52.29916861842294	0.2778091507991977	3				NaN	NaN	0	NaN	6685	4718	11403
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11406	33.901	NaN	4872.1	30	0	2066.2	0.106	+			6226	AVRKVMRR	8	38	339.2149884676064	1014.6231360030192	3	339.2147216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVRKVMRR_	ENSG00000197591|ENST00000355784|OR11L1	18.324413293986947	0.7971860551947066	3				NaN	NaN	0	NaN	6686	4718	11403
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11407	33.903	NaN	2540	30	0	412	0.106			+	18224	INLASVTGPVL	11	68	542.3244442789501	1082.6343356247	2	542.3241577148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_INLASVTGPVL_	REV__ENST00000531958.5_1_11:67184647-67184824:+|nuORF	31.529811441608018	0.6590691889962369	3				NaN	NaN	0	NaN	6687	4718	11403
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11408	33.905	NaN	2304.5	30	0	101.35	0.106	+			8710	EEDGGAGAKPL	11	62	522.2557228659413	1042.4968927986824	2	522.2567138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EEDGGAGAKPL_	DPP6|p.I184Nfs*2|2|0.4|ENSG00000130226|chr7:154540617-154540618|-/A|frameshift_variant;ENSG00000130226|ENST00000377770|DPP6	35.15202426646627	0.6210751305041943	3				NaN	NaN	0	NaN	6688	4718	11403
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11409	33.906	NaN	3401.9	30	0	537.6	0.106	+			5988	AVLSWKLAK	9	62	508.3189071441984	1014.6232613551969	2	508.3182373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AVLSWKLAK_	ENSG00000188725|ENST00000339020|SMIM15;SMIM15|p.M47T|1|0.4|ENSG00000188725|chr5:61160032-61160032|A/G|missense_variant	71.87747018426188	0.13267044672804276	3				NaN	NaN	0	NaN	6689	4718	11403
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11410	33.908	NaN	1724.7	30	0	160.98	0.036			+	48356	VTGPMGRSTPV	11	60	551.2881125932753	NaN	0	551.2880859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VTGPMGRSTPV_	REV__ENSG00000111752|ENST00000544916|PHC1;REV__PHC1|p.A848Dfs*59|1|0.09|ENSG00000111752|chr12:8937240-8937241|-/ACCAC|frameshift_variant;REV__PHC1|p.G884Vfs*21|1|0.41|ENSG00000111752|chr12:8937848-8937848|G/-|frameshift_variant	33.921630207806714	0.41424167740351664	3				NaN	NaN	0	NaN	6690	4718	11403
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11416	33.923	NaN	12881	30	0	2167.7	0.214	+			50965	YIHVGAQL	8	67	450.75084776733166	899.4871426014633	2	450.75006103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YIHVGAQL_	ENSG00000176658|ENST00000318217|MYO1D	130.0063194341781	0.22123782109351148	3				NaN	NaN	0	NaN	6693	4721	11415
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11417	33.927	NaN	3813.6	30	0	702.65	0.106	+			12502	GEEKLIASV	9	66	473.2667638752245	944.518974817249	2	473.26568603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEEKLIASV_	ENSG00000130713|ENST00000372358|EXOSC2;ENST00000430138.6_1_9:133569178-133570981:+|nuORF;ENST00000463488.1_1_9:133569202-133574940:+|nuORF;ENST00000491115.6_1_9:133569178-133574746:+|nuORF;nc|ENSG00000130713|Q13868-2|EXOSC2;nc|ENSG00000130713|Q13868-3|EXOSC2	78.26377905018397	0.10505600812668463	3				NaN	NaN	0	NaN	6694	4721	11415
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11418	33.928	NaN	5083.9	30	0	1755.6	0.106	+			47376	VPHSIINGY	9	64	500.2669512087233	998.5193494842466	2	500.2663879394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VPHSIINGY_	ENSG00000089157|ENST00000392514|RPLP0;nc|ENSG00000089157|P05388-2|RPLP0;nc|ENSG00000213553|Q8NHW5|RPLP0P6	87.75429964447693	0.0711966946989736	3				NaN	NaN	0	NaN	6695	4721	11415
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11419	33.93	NaN	3213	30	0	321.51	0.106			+	23466	LAEKSVLP	8	60	428.76208161145126	855.5096102897026	2	428.765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LAEKSVLP_	REV__ENSG00000066933|ENST00000356056|MYO9A;REV__ENST00000563542.5_1_15:72185266-72338904:-|nuORF;REV__ENST00000568781.1_1_15:72185941-72190124:-|nuORF;REV__MYO9A|p.L1961*|2|0.14|ENSG00000066933|chr15:71878089-71878089|A/-|frameshift_variant;REV__nc|ENSG00000066933|B2RTY4-2|MYO9A;REV__nc|ENSG00000066933|B2RTY4-4|MYO9A;REV__nc|ENSG00000066933|B2RTY4-5|MYO9A	68.484700416344	0.4195245774506064	3				NaN	NaN	0	NaN	6696	4721	11415
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11420	33.932	NaN	1861.2	30	0	317.44	0.106				-1	 	0	52	423.2661941187519	844.5178353043038	2	423.26580810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	6697	4721	11415
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11421	33.934	NaN	1580.6	30	0	143.38	0.106			+	-1	ISMGPLPIM	9	57	487.75655256847756	973.4985522037551	2	487.7557373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_ISMGPLPIM(Oxidation (M))_	REV__ENSG00000144061|ENST00000445609|NPHP1;REV__ENST00000496524.5_1_2:110902031-110920682:-|nuORF;REV__nc|ENSG00000144061|O15259-3|NPHP1;REV__nc|ENSG00000144061|O15259-4|NPHP1;REV__nc|ENSG00000144061|O15259|NPHP1	35.200714571348534	0.47427825964483533	3				NaN	NaN	0	NaN	6698	4721	11415
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11422	33.936	NaN	1192.6	30	0	100.26	0.035			+	11122	FFTPLWSL	8	61	505.7711294840512	NaN	0	505.7705078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FFTPLWSL_	REV__ENSG00000101194|ENST00000370351|SLC17A9;REV__ENST00000488738.5_1_20:61594563-61595083:+|nuORF;REV__nc|ENSG00000101194|Q9BYT1-2|SLC17A9	42.47446043378293	1.7418937515398478	3				NaN	NaN	0	NaN	6699	4721	11415
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11426	33.95	NaN	3454.7	30	0	356.34	0.215	+			482	AAYDSLVVGK	10	68	511.7794538497133	1021.5443547662267	2	511.7796325683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAYDSLVVGK_	ENSG00000128283|ENST00000249014|CDC42EP1;nc|ENSG00000128283|Q00587-2|CDC42EP1	63.53385203322761	0.33370026130094593	3				NaN	NaN	0	NaN	6700	4724	11425
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11427	33.953	NaN	2624	30	0	257.03	0.106			+	47533	VQSSRLAIP	9	66	485.7872941142887	NaN	0	485.7870178222656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VQSSRLAIP_	REV__DDIAS|p.L534Yfs*16|2|0.29|ENSG00000165490|chr11:82932934-82932934|T/-|frameshift_variant;REV__ENSG00000165490|ENST00000533655|DDIAS	54.776311868738084	0.17377682019723872	3				NaN	NaN	0	NaN	6701	4724	11425
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11428	33.955	NaN	1649.7	30	0	132.9	0.106			+	34147	RSVVCWRK	8	59	517.2877507275211	1032.5609485218422	2	517.2874755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RSVVCWRK_	REV__ENSG00000141293|ENST00000336915|SKAP1;REV__nc|ENSG00000141293|Q86WV1-2|SKAP1	53.351449002276354	0.5676011784961348	3				NaN	NaN	0	NaN	6702	4724	11425
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11429	33.957	NaN	1960.1	30	0	136.56	0.106	+			6681	AYVHMVTHF	9	62	552.7685585700301	1103.5225642068601	2	553.270263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AYVHMVTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	60.29395666154354	0.21116425950210296	3				NaN	NaN	0	NaN	6703	4724	11425
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11430	33.959	NaN	1743.1	30	0	157.11	0.035			+	10545	EYAKAANVL	9	50	489.76683001987163	977.5191071065433	2	489.7659606933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EYAKAANVL_	REV__ENSG00000105738|ENST00000222345|SIPA1L3	71.87747018426188	0.13267044672804276	3				NaN	NaN	0	NaN	6704	4724	11425
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11437	33.975	NaN	7120.7	30	0	740.43	0.214	+			39644	STIEYVIQR	9	67	554.8035010134345	1107.5924490936688	2	554.8048706054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STIEYVIQR_	ENSG00000101310|ENST00000650089|SEC23B	176.08678752253132	0.0017279326439731339	3				NaN	NaN	0	NaN	6708	4727	11436
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11438	33.979	NaN	1419.2	30	0	104.43	0.106			+	29943	PMQEHATTAI	10	62	549.7652148380471	NaN	0	549.7657470703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PMQEHATTAI_	REV__ZAP70|p.R160Q|1|0.41|ENSG00000115085|chr2:97725168-97725168|G/A|missense_variant	35.61828744233558	0.3832230071539346	3				NaN	NaN	0	NaN	6709	4727	11436
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11439	33.981	NaN	2009.8	30	0	229.98	0.034			+	-1	KFAASLTK	8	53	454.26634033830936	906.5181277434187	2	454.2655334472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))KFAASLTK_	REV__DIMT1|p.N254Tfs*12|1|0.38|ENSG00000086189|chr5:62392202-62392202|T/-|frameshift_variant;REV__ENSG00000086189|ENST00000199320|DIMT1;REV__ENST00000509182.1_1_5:61688751-61699599:-|nuORF	54.776311868738084	0.5534952410049249	3				NaN	NaN	0	NaN	6710	4727	11436
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11443	33.995	NaN	7253.1	30	0	936.06	0.214	+			30924	QELGEKLQA	9	71	508.27476153561577	1014.5349701380316	2	508.2740173339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QELGEKLQA_	ENSG00000163820|ENST00000296137|FYCO1;FYCO1|p.K751Rfs*12|1|0.42|ENSG00000163820|chr3:45967082-45967083|-/TCTC|frameshift_variant;nc|ENSG00000163820|Q9BQS8-4|FYCO1	60.11826168202944	0.21262886028301267	3				NaN	NaN	0	NaN	6711	4730	11442
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11444	33.998	NaN	1854.9	30	0	295.33	0.034	+			42431	TALGFLGAAP	10	49	459.26011359272167	916.5056742522434	2	459.25921630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TALGFLGAAP_	ENST00000421890.5_1_7:5862807-5863047:+|nuORF	57.81127852772723	0.38574637483653407	3				NaN	NaN	0	NaN	6712	4730	11442
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11450	34.014	NaN	10400	30	0	1520.2	0.214	+			36317	SESLPVRTL	9	73	501.2854179215535	1000.556282909907	2	501.2850341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SESLPVRTL_	ENSG00000075420|ENST00000415807|FNDC3B;FNDC3B|p.T1056Hfs*16|1|0.43|ENSG00000075420|chr3:172378419-172378420|-/C|frameshift_variant	96.0336014099291	0.047854655524928534	3				NaN	NaN	0	NaN	6715	4733	11449
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11451	34.018	NaN	3194.6	30	0	502.98	0.106			+	33632	RLVAAAEL	8	56	421.75851422760604	841.5024755220121	2	421.75750732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RLVAAAEL_	REV__ENSG00000143869|ENST00000272224|GDF7;REV__GDF7|p.R228Afs*41|1|0.5|ENSG00000143869|chr2:20670747-20670747|C/-|frameshift_variant	45.9519527083369	0.6193794311207887	3				NaN	NaN	0	NaN	6716	4733	11449
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11452	34.02	NaN	1609.5	30	0	117.21	0.106				-1	 	0	55	480.27442507820433	958.5342972232087	2	480.27392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	6717	4733	11449
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11453	34.022	NaN	2852	30	0	250.49	0.106			+	46492	VETVLGLIQ	9	66	486.2913629469184	970.5681729606368	2	486.2918701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VETVLGLIQ_	REV__ENSG00000157600|ENST00000372068|TMEM164;REV__nc|ENSG00000157600|Q5U3C3-2|TMEM164	64.20726635412375	0.17854274437659667	3				NaN	NaN	0	NaN	6718	4733	11449
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11454	34.024	NaN	2872.6	30	0	424.61	0.106	+			3045	ASFILGTGK	9	53	447.2584711730733	892.5023894129466	2	447.25848388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASFILGTGK_	CDCA2|p.N847Mfs*14|1|0.15|ENSG00000184661|chr8:25507200-25507200|A/-|frameshift_variant;ENSG00000184661|ENST00000330560|CDCA2;nc|ENSG00000184661|Q69YH5-2|CDCA2	104.01359247289065	0.03510646158778409	3				NaN	NaN	0	NaN	6719	4733	11449
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11455	34.025	NaN	777.15	30	0	224.36	0.035	+			38392	SRVSLVLLV	9	25	329.21847351071665	984.6335911323499	3	329.21826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SRVSLVLLV_	COL1A1|p.P622Lfs*144|1|0.2|ENSG00000108821|chr17:50192807-50192807|G/-|frameshift_variant;ENST00000225964.9_1_17:48268227-48270392:-|nuORF	8.822329726475273	0.6112419832031293	3				NaN	NaN	0	NaN	6720	4733	11449
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11461	34.041	NaN	3717.5	30	0	747.79	0.214			+	9677	ELVKGGVLA	9	67	443.27420613778133	884.5338593423627	2	443.27398681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ELVKGGVLA_	REV__ENST00000490912.5_1_7:26240373-26240535:-|nuORF	52.936696900407355	0.27249468807391813	3				NaN	NaN	0	NaN	6723	4736	11460
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11462	34.045	NaN	2762.3	30	0	309.72	0.106	+			26020	LSLEGKPL	8	54	428.76208161145126	855.5096102897026	2	428.7608642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSLEGKPL_	ENSG00000154783|ENST00000285046|FGD5;FGD5|p.D818*|1|0.19|ENSG00000154783|chr3:14821521-14821522|-/C|frameshift_variant;FGD5|p.T1238Pfs*9|1|0.25|ENSG00000154783|chr3:14922447-14922447|C/-|frameshift_variant	62.107414245175825	0.4809183816468817	3				NaN	NaN	0	NaN	6724	4736	11460
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11463	34.047	NaN	2853.6	30	0	318.31	0.106			+	18188	IMAKDDRLD	9	67	538.774094088412	1075.5336352436238	2	538.7747192382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IMAKDDRLD_	REV__ENST00000578535.1_1_18:22265891-22265996:-|nuORF	54.776311868738084	0.25715957988447635	3				NaN	NaN	0	NaN	6725	4736	11460
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11464	34.049	NaN	2021.5	30	0	161.95	0.106			+	47429	VPSKKPSSNF	10	64	545.7985411456232	1089.5825293580463	2	545.7999267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VPSKKPSSNF_	REV__ENSG00000163749|ENST00000682701|CCDC158;REV__nc|ENSG00000163749|Q5M9N0-2|CCDC158;REV__nc|ENSG00000163749|Q5M9N0|CCDC158	45.97224482568171	0.49411383603842696	3				NaN	NaN	0	NaN	6726	4736	11460
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11465	34.051	NaN	840.87	30	0	155.84	0.106	+			43729	TKVKEKFQ	8	32	336.53440929680414	1006.5813984906124	3	336.534423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TKVKEKFQ_	ENSG00000113734|ENST00000351486|BNIP1;nc|ENSG00000113734|Q12981-1|BNIP1;nc|ENSG00000113734|Q12981-2|BNIP1;nc|ENSG00000113734|Q12981-3|BNIP1	18.324413293986947	0.7971860551947066	3				NaN	NaN	0	NaN	6727	4736	11460
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11466	34.052	NaN	1843.7	30	0	131.88	0.106			+	26880	LWLSESPVK	9	59	529.7962645282579	NaN	0	529.7964477539062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LWLSESPVK_	REV__ENSG00000147432|ENST00000289957|CHRNB3	37.15910966729921	0.2899585034171616	3				NaN	NaN	0	NaN	6728	4736	11460
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11467	34.054	NaN	1619.6	30	0	78.093	0.034	+			5230	ATVAAILQH	9	56	462.2693240344923	922.5240951357846	2	462.26904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATVAAILQH_	ENSG00000183340|ENST00000332349|JRKL;JRKL|p.D446Gfs*26|1|0.07|ENSG00000183340|chr11:96391985-96391986|-/GTTTTACT|frameshift_variant	82.24051045832904	0.08786059719216216	3				NaN	NaN	0	NaN	6729	4736	11460
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11476	34.074	NaN	17852	30	0	5606.4	0.214	+			4640	ATLPPITVTSK	11	71	564.337366929102	1126.660180925004	2	564.3372802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATLPPITVTSK_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	86.18897241530135	0.11437590510873513	3				NaN	NaN	0	NaN	6735	4739	11475
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11477	34.078	NaN	1764.5	30	0	389.05	0.106				-1	 	0	57	558.2492200451707	1114.4838871571412	2	558.2490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	6736	4739	11475
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11478	34.08	NaN	2020	30	0	445.34	0.106	+			24175	LENVDKVL	8	61	465.26915333427075	NaN	0	465.2701721191406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LENVDKVL_	SPTBN4|p.A126V|1|0.3|ENSG00000160460|chr19:40490130-40490130|C/T|missense_variant	44.116797842482775	1.7418937515398478	3				NaN	NaN	0	NaN	6737	4739	11475
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11479	34.081	NaN	1453	30	0	325.5	0.106	+			21140	KKSYKSFEK	9	32	382.2167447917312	NaN	0	382.2163391113281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KKSYKSFEK_	ENSG00000117010|ENST00000372699|ZNF684;ENST00000493756.1_1_1:40997452-41013129:+|nuORF	35.15202426646627	0.3000918603816441	3				NaN	NaN	0	NaN	6738	4739	11475
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11480	34.083	NaN	1722.7	30	0	188.63	0.106			+	-1	LCWLSFYELH	10	58	684.3271541120694	NaN	0	684.3275756835938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_LC(Carbamidomethyl (C))WLSFYELH_	REV__DNA2|p.L697Ffs*28|1|0.35|ENSG00000138346|chr10:68430553-68430554|-/A|frameshift_variant;REV__ENSG00000138346|ENST00000358410|DNA2;REV__nc|ENSG00000138346|P51530-2|DNA2;REV__nc|ENSG00000138346|P51530-3|DNA2;REV__nc|ENSG00000138346|P51530-4|DNA2	21.9598887501803	0.4201028297492154	3				NaN	NaN	0	NaN	6739	4739	11475
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11481	34.085	NaN	1086.5	30	0	95.604	0.038			+	29246	NWSITEGPMQS	11	55	625.280546241836	1248.5465395504718	2	625.2798461914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NWSITEGPMQS_	REV__ENST00000461049.1_1_3:169780199-169780457:+|nuORF;REV__ENST00000476668.1_1_3:169775750-169780457:+|nuORF	20.83715455343099	0.7712264395190968	3				NaN	NaN	0	NaN	6740	4739	11475
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11482	34.086	NaN	1730.3	30	0	344.76	0.142			+	48446	VTKVLELN	8	52	458.27916589040655	914.5437788476131	2	458.2606201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VTKVLELN_	REV__ENSG00000136492|ENST00000259008|BRIP1;REV__nc|ENSG00000136492|Q9BX63-2|BRIP1	55.50420428727701	0.5462892107279674	3				NaN	NaN	0	NaN	6741	4739	11475
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11488	34.103	NaN	4821.8	30	0	462.22	0.214	+			10421	EVIIAQQTI	9	71	507.7956111844406	1013.5766694356812	2	507.79541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EVIIAQQTI_	ENST00000244869.2_1_4:75251275-75251359:+|nuORF	54.776311868738084	0.25715957988447635	3				NaN	NaN	0	NaN	6744	4742	11487
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11489	34.107	NaN	3236.3	30	0	213.78	0.106	+			13862	GQWKKGFVL	9	59	531.809274060333	1061.603995187466	2	531.8087158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GQWKKGFVL_	ENSG00000142864|ENST00000361219|SERBP1;ENST00000484880.1_1_1:67885652-67890638:-|nuORF;nc|ENSG00000142864|Q8NC51-2|SERBP1;nc|ENSG00000142864|Q8NC51-4|SERBP1;nc|ENSG00000142864|Q8NC51|SERBP1	35.61828744233558	0.47037581924408073	3				NaN	NaN	0	NaN	6745	4742	11487
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11490	34.109	NaN	2439.7	30	0	190.11	0.106			+	24780	LIETAQKSF	9	64	518.7878628325991	NaN	0	518.7880859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LIETAQKSF_	REV__ENSG00000167081|ENST00000373489|PBX3;REV__ENST00000538998.1_1_9:128606084-128725334:+|nuORF;REV__nc|ENSG00000167081|P40426-2|PBX3;REV__nc|ENSG00000167081|P40426-3|PBX3;REV__nc|ENSG00000167081|P40426-4|PBX3;REV__nc|ENSG00000167081|P40426-5|PBX3;REV__PBX3|p.N241S|1|0.11|ENSG00000167081|chr9:125935486-125935486|A/G|missense_variant	55.50420428727701	0.16876052142120426	3				NaN	NaN	0	NaN	6746	4742	11487
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11491	34.111	NaN	1464.9	30	0	135.9	0.106	+			24801	LILMITAHGT	10	60	535.3079355011939	NaN	0	535.3087158203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LILMITAHGT_	ENST00000551407.5_1_12:77191259-77191304:+|nuORF	42.396135135203025	0.3536752194735987	3				NaN	NaN	0	NaN	6747	4742	11487
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11492	34.113	NaN	2966.1	30	0	338.85	0.034	+			47684	VSDVHFIQ	8	62	472.7450570377718	NaN	0	472.7449951171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSDVHFIQ_	ENST00000543005.5_1_12:124118406-124132575:+|nuORF	38.80614096846853	1.7418937515398478	3				NaN	NaN	0	NaN	6748	4742	11487
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11498	34.129	NaN	6998.4	30	0	1707.2	0.214	+			42873	TEGYQPPPV	9	62	494.24317780522495	986.4718026772499	2	494.2427978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEGYQPPPV_	ENSG00000108639|ENST00000225777|SYNGR2;ENST00000592456.1_1_17:76167504-76168014:+|nuORF	82.7504851949679	0.08565546331141553	3				NaN	NaN	0	NaN	6751	4745	11497
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11499	34.132	NaN	3386.1	30	0	368.83	0.106			+	-1	KVVEPSSTGSM	11	64	569.2771113529561	1136.5396697727122	2	569.2776489257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_KVVEPSSTGSM(Oxidation (M))_	REV__MON2|p.A9V|1|0.15|ENSG00000061987|chr12:62467233-62467233|C/T|missense_variant	31.529811441608018	0.6590691889962369	3				NaN	NaN	0	NaN	6752	4745	11497
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11500	34.134	NaN	4549.9	30	0	869.91	0.106	+			47878	VSLGTPIMK	9	68	473.27569424744684	944.5368355616937	2	473.2751770019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSLGTPIMK_	ECT2|p.K832Rfs*25|1|0.1|ENSG00000114346|chr3:172815693-172815693|A/-|frameshift_variant;ENSG00000114346|ENST00000392692|ECT2;nc|ENSG00000114346|Q9H8V3-2|ECT2;nc|ENSG00000114346|Q9H8V3-3|ECT2;nc|ENSG00000114346|Q9H8V3-4|ECT2	107.00750918261382	0.032051501805654005	3				NaN	NaN	0	NaN	6753	4745	11497
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11501	34.136	NaN	2624.5	30	0	377.64	0.106			+	-1	MIPRPYDM	8	59	519.7414478780871	1037.4683428229741	2	519.7413330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_MIPRPYDM(Oxidation (M))_	REV__ENSG00000244474|ENST00000373409|UGT1A4;REV__nc|ENSG00000244474|P22310-2|UGT1A4;REV__nc|ENSG00000288702|P35503-3|UGT1A3;REV__nc|ENSG00000288702|P35503|UGT1A3;REV__nc|ENSG00000288705|P35504-2|UGT1A5;REV__nc|ENSG00000288705|P35504|UGT1A5	38.80614096846853	0.6637206697844082	3				NaN	NaN	0	NaN	6754	4745	11497
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11502	34.138	NaN	3343.8	30	0	720.14	0.106	+			36935	SILGTPLSK	9	54	458.27916589040655	914.5437788476131	2	458.2790222167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SILGTPLSK_	ENSG00000166912|ENST00000435680|MTMR10;ENST00000566338.5_1_15:31233675-31240771:-|nuORF;ENST00000567567.5_1_15:31233675-31258111:-|nuORF;MTMR10|p.L761*|1|0.4|ENSG00000166912|chr15:30941522-30941522|A/-|frameshift_variant	47.95952297671804	0.32689736945648856	3				NaN	NaN	0	NaN	6755	4745	11497
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11503	34.14	NaN	2160	30	0	302.19	0.037	+			47344	VPDSSGPERIL	11	61	585.3120699089488	1168.6095868846976	2	585.8135375976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VPDSSGPERIL_	ENSG00000165119|ENST00000376263|HNRNPK;nc|ENSG00000165119|P61978-3|HNRNPK;nc|ENSG00000165119|P61978|HNRNPK	50.033510581677724	0.4206539900604183	3				NaN	NaN	0	NaN	6756	4745	11497
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11507	34.154	NaN	6839.6	30	0	1403.5	0.214	+			14564	GTFLEGVAK	9	58	461.25576625853864	920.4969795838773	2	461.2552795410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTFLEGVAK_	ENSG00000174886|ENST00000308961|NDUFA11;ENST00000593233.1_1_19:5894755-5901370:-|nuORF;nc|ENSG00000174886|Q86Y39-2|NDUFA11	104.0567914643314	0.03506238181059741	3				NaN	NaN	0	NaN	6757	4748	11506
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11508	34.157	NaN	2135.7	30	0	145.06	0.036	+			34423	RTTKGAREAGG	11	63	552.2975753843929	1102.5805978355856	2	552.2979125976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RTTKGAREAGG_	ENSG00000225614|ENST00000565624|ZNF469;ZNF469|p.A3754Rfs*17|1|0.31|ENSG00000225614|chr16:88438809-88438810|-/C|frameshift_variant;ZNF469|p.D3286Tfs*124|1|0.31|ENSG00000225614|chr16:88437405-88437405|C/-|frameshift_variant;ZNF469|p.H655Pfs*83|1|0.27|ENSG00000225614|chr16:88429426-88429427|-/C|frameshift_variant;ZNF469|p.H655Tfs*77|1|0.31|ENSG00000225614|chr16:88429427-88429427|C/-|frameshift_variant;ZNF469|p.I1874Yfs*24|1|0.39|ENSG00000225614|chr16:88433167-88433167|C/-|frameshift_variant;ZNF469|p.L482Cfs*20|1|0.58|ENSG00000225614|chr16:88428909-88428909|C/-|frameshift_variant;ZNF469|p.P1292Lfs*235|1|0.47|ENSG00000225614|chr16:88431424-88431424|C/-|frameshift_variant;ZNF469|p.P206Qfs*140|1|0.19|ENSG00000225614|chr16:88428083-88428083|C/-|frameshift_variant;ZNF469|p.P398Lfs*104|1|0.59|ENSG00000225614|chr16:88428659-88428659|C/-|frameshift_variant;ZNF469|p.Q212Rfs*134|1|0.53|ENSG00000225614|chr16:88428098-88428098|C/-|frameshift_variant;ZNF469|p.Q2396Kfs*49|1|0.23|ENSG00000225614|chr16:88434735-88434735|C/-|frameshift_variant;ZNF469|p.R204Gfs*142|1|0.15|ENSG00000225614|chr16:88428075-88428075|C/-|frameshift_variant;ZNF469|p.R3417Gfs*56|2|0.61|ENSG00000225614|chr16:88437795-88437795|G/-|frameshift_variant;ZNF469|p.R3634Efs*58|4|0.52|ENSG00000225614|chr16:88438444-88438444|G/-|frameshift_variant;ZNF469|p.R3818Gfs*95|1|0.46|ENSG00000225614|chr16:88439000-88439000|C/-|frameshift_variant	38.753607047826485	0.5749975102143227	3				NaN	NaN	0	NaN	6758	4748	11506
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11512	34.171	NaN	4446.9	30	0	1002.5	0.214	+			25185	LMAQLDPLF	9	67	524.2802237176696	1046.5458945021392	2	524.281494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LMAQLDPLF_	ENSG00000159884|ENST00000426546|CCDC107;ENST00000421582.2_2_9:35660480-35660645:+|nuORF;nc|ENSG00000159884|Q8WV48-2|CCDC107;nc|ENSG00000159884|Q8WV48-3|CCDC107;nc|ENSG00000159884|Q8WV48-5|CCDC107	56.72105179125745	0.24094814563026265	3				NaN	NaN	0	NaN	6759	4751	11511
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11513	34.175	NaN	1088.5	30	0	253.97	0.106				-1	 	0	35	341.71601728180286	681.4174816304057	2	341.71563720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	6760	4751	11511
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11514	34.177	NaN	1982.8	30	0	169.71	0.106			+	51617	YYVQSYIF	8	60	541.7654692378159	1081.5163855424316	2	542.265869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YYVQSYIF_	REV__nc|ENSG00000158813|Q92838-3|EDA;REV__nc|ENSG00000158813|Q92838-9|EDA	34.172542307311794	0.6954784234644539	3				NaN	NaN	0	NaN	6761	4751	11511
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11515	34.179	NaN	1133.2	30	0	74.369	0.034	+			46413	VEPNPGIPGA	10	52	475.75115633886514	949.4877597445303	2	475.7501220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VEPNPGIPGA_	ENSG00000132510|ENST00000448097|KDM6B;KDM6B|p.K1101Rfs*3|1|0.23|ENSG00000132510|chr17:7849583-7849583|C/-|frameshift_variant;KDM6B|p.P544Sfs*11|1|0.14|ENSG00000132510|chr17:7847912-7847913|-/C|frameshift_variant;KDM6B|p.P842Hfs*52|1|0.38|ENSG00000132510|chr17:7848808-7848808|C/-|frameshift_variant;KDM6B|p.R513Afs*69|1|0.84|ENSG00000132510|chr17:7847819-7847819|C/-|frameshift_variant;KDM6B|p.T676Hfs*8|1|0.18|ENSG00000132510|chr17:7848307-7848308|-/C|frameshift_variant;KDM6B|p.T743Pfs*39|1|0.55|ENSG00000132510|chr17:7848510-7848510|C/-|frameshift_variant;nc|ENSG00000132510|O15054-1|KDM6B	23.52269567125451	0.6877354443478558	3				NaN	NaN	0	NaN	6762	4751	11511
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11519	34.192	NaN	1680.1	30	0	174.75	0.214			+	44770	TTPPPRTTP	9	55	484.26363324183745	NaN	0	484.26373291015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTPPPRTTP_	REV__ENSG00000110448|ENST00000347785|CD5	34.172542307311794	0.30503706118289736	3				NaN	NaN	0	NaN	6763	4754	11518
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11520	34.196	NaN	1939	30	0	233.25	0.034	+			1364	AEVGAAETTL	10	63	481.24556112297626	960.4765693127525	2	481.2453308105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEVGAAETTL_	ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF	60.11826168202944	0.36476464221954025	3				NaN	NaN	0	NaN	6764	4754	11518
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11525	34.21	NaN	4034	30	0	1659.2	0.214			+	30187	PSLEGLEKI	9	63	493.2822702700515	984.5499876069031	2	493.28143310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PSLEGLEKI_	REV__ENSG00000109452|ENST00000262992|INPP4B;REV__INPP4B|p.K530Efs*15|1|0.23|ENSG00000109452|chr4:142145972-142145973|-/C|frameshift_variant	76.7741389293348	0.11149722112137898	3				NaN	NaN	0	NaN	6766	4757	11524
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11526	34.214	NaN	2325.9	30	0	521.91	0.106	+			1236	AERELVAVI	9	54	500.2956776994685	998.576802465737	2	500.29534912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AERELVAVI_	ENSG00000104231|ENST00000220669|ZFAND1;ENST00000517353.5_1_8:82627029-82645114:-|nuORF;ENST00000519820.5_1_8:82626874-82633516:-|nuORF;ENST00000520635.5_1_8:82627220-82630434:-|nuORF;ENST00000524339.5_1_8:82626874-82630434:-|nuORF;nc|ENSG00000104231|Q8TCF1-3|ZFAND1;nc|ENSG00000104231|Q8TCF1-4|ZFAND1	51.33545320467046	0.2872990594074956	3				NaN	NaN	0	NaN	6767	4757	11524
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11527	34.216	NaN	2673.6	30	0	462.61	0.106	+			5761	AVGLVLPAK	9	52	434.28695098638525	866.5593490395705	2	434.2865295410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVGLVLPAK_	ENSG00000162496|ENST00000616661|DHRS3;nc|ENSG00000162496|O75911-2|DHRS3	123.9887779854562	0.018785054595953452	3				NaN	NaN	0	NaN	6768	4757	11524
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11528	34.218	NaN	1962.9	30	0	187.96	0.106	+			44885	TTVRTNASG	9	54	453.73371067838957	905.4528684235792	2	454.234619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TTVRTNASG_	ENSG00000204882|ENST00000377741|GPR20	27.882242232435846	0.5426732730940306	3				NaN	NaN	0	NaN	6769	4757	11524
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11529	34.219	NaN	2328.6	30	0	133.14	0.037	+			51022	YKGSPNANEPP	11	69	587.2802762820238	1172.5459996308475	2	587.7825927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YKGSPNANEPP_	ENSG00000002549|ENST00000226299|LAP3;ENST00000503467.1_1_4:17587853-17609209:+|nuORF;nc|ENSG00000002549|P28838-2|LAP3	30.317721548370564	0.6717830234747728	3				NaN	NaN	0	NaN	6770	4757	11524
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11534	34.234	NaN	1944.1	30	0	500.85	0.214			+	27077	MAIDLAAAK	9	51	452.2509316736096	902.4873104140192	2	452.2506408691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MAIDLAAAK_	REV__ENSG00000111271|ENST00000313698|ACAD10;REV__ENST00000512792.2_1_12:112191278-112193633:+|nuORF;REV__ENST00000547491.1_1_12:112186933-112194274:+|nuORF;REV__nc|ENSG00000111271|Q6JQN1-5|ACAD10	51.33545320467046	0.2872990594074956	3				NaN	NaN	0	NaN	6772	4760	11533
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11535	34.237	NaN	4095.9	30	0	367.31	0.106			+	44016	TPKPPPSIAP	10	64	502.7926570991234	1003.5707612650468	2	502.7919616699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TPKPPPSIAP_	REV__ENSG00000090060|ENST00000216277|PAPOLA	44.377184641726394	0.5088115166961078	3				NaN	NaN	0	NaN	6773	4760	11533
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11536	34.239	NaN	4888.7	30	0	880.4	0.106	+			19090	IYIKQIKTF	9	50	385.23794826207273	1152.6920153864182	3	385.5722351074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IYIKQIKTF_	ENSG00000103479|ENST00000262133|RBL2	32.81241826257853	0.4965981579233955	3				NaN	NaN	0	NaN	6774	4760	11533
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11537	34.241	NaN	2903.7	30	0	273.9	0.036	+			18725	ITGQRLWVD	9	68	544.2986777724009	1086.5828026116017	2	544.2982177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ITGQRLWVD_	ENSG00000261150|ENST00000615648|EPPK1;EPPK1|p.G2015Vfs*36|2|0.33|ENSG00000261150|chr8:143867210-143867210|C/-|frameshift_variant;EPPK1|p.Q829Rfs*8|1|0.05|ENSG00000261150|chr8:143870770-143870770|C/-|frameshift_variant;EPPK1|p.Y695Ifs*68|1|0.36|ENSG00000261150|chr8:143871171-143871172|-/T|frameshift_variant	37.15910966729921	0.4535818937225704	3				NaN	NaN	0	NaN	6775	4760	11533
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11543	34.256	NaN	2812.6	30	0	578.07	0.214			+	51521	YVSLLSAQL	9	57	497.2851393627184	992.5557257922368	2	497.2841491699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YVSLLSAQL_	REV__ENST00000477592.2_1_6:3722960-3723107:-|nuORF	37.15910966729921	0.4535818937225704	3				NaN	NaN	0	NaN	6778	4763	11542
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11544	34.259	NaN	1803.4	30	0	148.57	0.035			+	28274	NEAATVKYN	9	56	505.2508654763212	1008.4871780194425	2	505.25054931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NEAATVKYN_	REV__STAT1|p.M654T|1|0.13|ENSG00000115415|chr2:190976938-190976938|A/G|missense_variant	37.81151784470057	0.4459294069877048	3				NaN	NaN	0	NaN	6779	4763	11542
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11550	34.275	NaN	9187.8	30	0	1231.9	0.214			+	47967	VSNLLLKTY	9	77	525.8134452670411	1049.612337600882	2	525.8135986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSNLLLKTY_	REV__tr|U7SSL7|U7SSL7_FUSNUPeptide/nickeltransportsystemATP-bindingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01495PE=3SV=1	49.536043120802724	0.308405419312776	3				NaN	NaN	0	NaN	6782	4766	11549
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11551	34.279	NaN	1514.6	30	0	88.376	0.106	+			47773	VSGYKHAGTY	10	65	541.7654692378159	1081.5163855424316	2	541.7677001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSGYKHAGTY_	ENSG00000171368|ENST00000360578|TPPP	28.081489160057373	0.6505064946289502	3				NaN	NaN	0	NaN	6783	4766	11549
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11552	34.281	NaN	2071.2	30	0	181.2	0.035				-1	LMILRAPEA	9	61	515.2898559570312	NaN	0	515.2898559570312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_LM(Oxidation (M))ILRAPEA_	ENST00000372548.8_2_X:105905442-105905526:+|nuORF	47.91560031466742	0.22105767942158736	3				NaN	NaN	0	NaN	6784	4766	11549
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11558	34.295	NaN	1803.4	30	0	255.79	0.214	+			10269	ETLRASDIL	9	54	509.2827932608741	1016.5510335885482	2	509.2822570800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ETLRASDIL_	CEP295|p.F1469Yfs*47|1|0.31|ENSG00000166004|chr11:93699317-93699318|-/ATCCAGCC|frameshift_variant;CEP295|p.L2479Ffs*6|1|0.29|ENSG00000166004|chr11:93729651-93729651|A/-|frameshift_variant;CEP295|p.S1014Yfs*28|1|0.44|ENSG00000166004|chr11:93697948-93697957|AAAATCTGGA/-|frameshift_variant;ENSG00000166004|ENST00000325212|CEP295;nc|ENSG00000166004|Q9C0D2-3|CEP295	44.377184641726394	0.36891676396732553	3				NaN	NaN	0	NaN	6787	4769	11557
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11559	34.299	NaN	1526.2	30	0	122.94	0.106	+			50966	YIHVGAQL	8	53	450.75084776733166	899.4871426014633	2	450.75048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YIHVGAQL_	ENSG00000176658|ENST00000318217|MYO1D	54.76467175910256	0.5536104764165384	3				NaN	NaN	0	NaN	6788	4769	11557
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11560	34.301	NaN	2791.1	30	0	237.26	0.106	+			36758	SHLAEAFAK	9	63	487.2591739146016	972.5037948960032	2	487.2581481933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SHLAEAFAK_	ENSG00000166405|ENST00000309737|RIC3;ENST00000529035.1_1_11:8157336-8161717:-|nuORF;nc|ENSG00000166405|Q7Z5B4-2|RIC3;nc|ENSG00000166405|Q7Z5B4-5|RIC3;nc|ENSG00000166405|Q7Z5B4-6|RIC3	40.77816245573522	0.41113185337114944	3				NaN	NaN	0	NaN	6789	4769	11557
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11561	34.303	NaN	1835.4	30	0	142.31	0.106			+	24145	LELFHVFY	8	60	534.2805406630391	1066.5465283928781	2	534.280029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LELFHVFY_	REV__ENST00000517937.1_1_6:56599965-56716690:-|nuORF	35.200714571348534	0.6875396545722289	3				NaN	NaN	0	NaN	6790	4769	11557
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11562	34.304	NaN	542.16	30	0	52.232	0.106			+	50539	YARPLARLL	9	40	358.22503662109375	NaN	0	358.22503662109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YARPLARLL_	REV__ENSG00000196218|ENST00000359596|RYR1;REV__nc|ENSG00000196218|P21817-2|RYR1;REV__nc|ENSG00000196218|P21817-3|RYR1;REV__RYR1|p.D2713Tfs*33|1|0.11|ENSG00000196218|chr19:38504811-38504811|C/-|frameshift_variant;REV__RYR1|p.P3303Tfs*8|1|0.36|ENSG00000196218|chr19:38517571-38517572|-/C|frameshift_variant	25.450171626174864	0.34907449758287085	3				NaN	NaN	0	NaN	6791	4769	11557
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11563	34.306	NaN	1056.9	30	0	81.619	0.106				-1	 	0	58	610.6517373851273	NaN	0	610.65185546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	6792	4769	11557
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11564	34.308	NaN	1854.1	30	0	157.09	0.037	+			15010	GTNAMDSPLLK	11	65	573.7952053015899	1145.5758576699798	2	573.7950439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GTNAMDSPLLK_	ENSG00000105402|ENST00000263354|NAPA	45.02220120713402	0.4892240028381124	3				NaN	NaN	0	NaN	6793	4769	11557
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11570	34.323	NaN	9705.2	30	0	1886	0.214				-1	 	0	66	495.7849571425133	989.5553613518266	2	495.7845458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	6796	4772	11569
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11571	34.326	NaN	5871.8	30	0	742.91	0.106	+			39645	STIEYVIQR	9	65	554.8035010134345	1107.5924490936688	2	554.803955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STIEYVIQR_	ENSG00000101310|ENST00000650089|SEC23B	162.25246889848123	0.0040893836092247005	3				NaN	NaN	0	NaN	6797	4772	11569
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11572	34.328	NaN	2561.8	30	0	171.78	0.035	+			49768	VYQHGLTGF	9	67	511.2592013422287	1020.5038497512575	2	511.7614440917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYQHGLTGF_	ENSG00000030110|ENST00000374467|BAK1	71.87747018426188	0.13267044672804276	3				NaN	NaN	0	NaN	6798	4772	11569
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11577	34.342	NaN	3327.2	30	0	298.36	0.214	+			39884	STLQVGSLNVK	11	63	573.3302064324022	1144.6458599316043	2	573.3302612304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STLQVGSLNVK_	ENSG00000063854|ENST00000397356|HAGH;ENST00000569700.5_1_16:1869077-1876788:-|nuORF;nc|ENSG00000063854|Q16775-2|HAGH	58.62960593111931	0.3356877741313683	3				NaN	NaN	0	NaN	6800	4775	11576
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11578	34.345	NaN	2722.2	30	0	566.64	0.106	+			14898	GTLSSYIVK	9	61	484.2768805244612	966.5392081157224	2	484.2763366699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTLSSYIVK_	ENSG00000082068|ENST00000265107|WDR70	63.53385203322761	0.18415635464017938	3				NaN	NaN	0	NaN	6801	4775	11576
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11579	34.347	NaN	3350.5	30	0	432.89	0.106	+			874	AEHFLEQQM	9	66	566.7585054938339	1131.5024580544678	2	567.2605590820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEHFLEQQM_	CCT3|p.A379Lfs*9|1|0.21|ENSG00000163468|chr1:156312061-156312061|C/-|frameshift_variant;CCT3|p.K197Nfs*23|1|0.17|ENSG00000163468|chr1:156320857-156320857|T/-|frameshift_variant;CCT3|p.L350Ffs*9|1|0.49|ENSG00000163468|chr1:156312146-156312147|-/A|frameshift_variant;ENSG00000163468|ENST00000295688|CCT3;nc|ENSG00000163468|P49368-2|CCT3	53.08895987439943	0.27122541748218487	3				NaN	NaN	0	NaN	6802	4775	11576
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11580	34.349	NaN	3823.1	30	0	415.41	0.106	+			50827	YETEGIRGL	9	71	519.2677377396132	NaN	0	519.2695922851562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YETEGIRGL_	ENSG00000076003|ENST00000264156|MCM6;MCM6|p.K365Nfs*6|1|0.23|ENSG00000076003|chr2:135862732-135862732|T/-|frameshift_variant;MCM6|p.R771Efs*3|1|0.33|ENSG00000076003|chr2:135844583-135844583|T/-|frameshift_variant	65.46538089061403	0.1260090208616529	3				NaN	NaN	0	NaN	6803	4775	11576
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11581	34.351	NaN	1652.8	30	0	109.21	0.106				-1	IKAHPSSI	8	46	447.75633493020285	893.4981169272057	2	447.7555236816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))IKAHPSSI_	ENSG00000134588|ENST00000511190|USP26;USP26|p.R471I|1|0.56|ENSG00000134588|chrX:133026809-133026809|C/A|missense_variant;USP26|p.T482I|1|0.65|ENSG00000134588|chrX:133026776-133026776|G/A|missense_variant	71.29570347882199	0.39610197767395533	3				NaN	NaN	0	NaN	6804	4775	11576
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11582	34.353	NaN	1134.7	30	0	162.28	0.106	+			14185	GSRLPAIPRLK	11	37	403.25908585984666	NaN	0	403.2586975097656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GSRLPAIPRLK_	nc|ENSG00000117143|Q16222-2|UAP1	14.086013023434994	0.456735970842152	3				NaN	NaN	0	NaN	6805	4775	11576
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11583	34.355	NaN	1795.3	30	0	578.12	0.036				-1	CPILPRLPG	9	34	341.53218892047266	1021.574737361618	3	341.5317077636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_C(Carbamidomethyl (C))PILPRLPG_	ENST00000412391.6_2_19:36233501-36235273:-|nuORF;ENST00000587987.5_1_19:36233501-36235544:-|nuORF;ENST00000590135.5_1_19:36233501-36233795:-|nuORF;ENST00000591084.5_3_19:36233501-36234996:-|nuORF;ENST00000592913.5_1_19:36233501-36235052:-|nuORF;nc|ENSG00000161265|Q8WU68-2|U2AF1L4	21.9598887501803	0.5980208138527809	3				NaN	NaN	0	NaN	6806	4775	11576
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11589	34.369	NaN	2737.5	30	0	211.2	0.214	+			26275	LSTPRCPWL	9	63	536.7819715259379	1071.5493901186758	2	536.7804565429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSTPRCPWL_	ENST00000225760.5_1_17:62075843-62079332:+|nuORF;nc|ENSG00000224383|P0C7W0-2|PRR29	42.396135135203025	0.392153681582562	3				NaN	NaN	0	NaN	6809	4778	11588
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11590	34.373	NaN	1205.3	30	0	99.815	0.106			+	27709	MQFCNKVY	8	54	516.7344577772333	NaN	0	516.7725830078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MQFCNKVY_	REV__ENST00000423757.1_1_7:149031855-149031933:+|nuORF	42.47446043378293	1.7418937515398478	3				NaN	NaN	0	NaN	6810	4778	11588
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11591	34.375	NaN	1288.2	30	0	133.37	0.037	+			3404	ASQETVATILK	11	57	580.8300030555381	NaN	0	580.830078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASQETVATILK_	ENSG00000132849|ENST00000642238|PATJ;nc|ENSG00000132849|Q8NI35-5|PATJ;nc|ENSG00000132849|Q8NI35|PATJ	41.080066990542036	0.3793850210388171	3				NaN	NaN	0	NaN	6811	4778	11588
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11596	34.389	NaN	5250.9	30	0	453.91	0.214	+			8274	EAIALAEKY	9	64	504.2747138460445	1006.534874758889	2	504.27398681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EAIALAEKY_	ENSG00000069974|ENST00000336787|RAB27A	104.0567914643314	0.03506238181059741	3				NaN	NaN	0	NaN	6813	4781	11595
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11597	34.392	NaN	3042.3	30	0	334.34	0.106	+			26063	LSLQSVPL	8	55	428.76208161145126	855.5096102897026	2	428.7607727050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSLQSVPL_	ENSG00000139445|ENST00000299162|FOXN4;nc|ENSG00000139445|Q96NZ1-3|FOXN4	84.9155231211612	0.2928622555056503	3				NaN	NaN	0	NaN	6814	4781	11595
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11598	34.394	NaN	1732.1	30	0	134.46	0.034	+			51102	YLTEKGNE	8	48	477.23340892248996	952.4522649117799	2	477.23211669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YLTEKGNE_	CFAP97|p.L103Ifs*3|1|0.15|ENSG00000164323|chr4:185190890-185190891|-/T|frameshift_variant;ENSG00000164323|ENST00000458385|CFAP97;nc|ENSG00000164323|Q9P2B7-2|CFAP97	44.116797842482775	0.6307669463330267	3				NaN	NaN	0	NaN	6815	4781	11595
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11603	34.409	NaN	2282.6	30	0	367.04	0.214	+			23991	LEAAGIGKL	9	53	436.26643895830324	870.5183249834065	2	436.2659606933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LEAAGIGKL_	ANKRD17|p.K886Sfs*4|1|0.39|ENSG00000132466|chr4:73139959-73139959|T/-|frameshift_variant;ANKRD17|p.L2249Yfs*84|1|0.34|ENSG00000132466|chr4:73090884-73090884|G/-|frameshift_variant;ENSG00000131503|ENST00000360839|ANKHD1;ENSG00000132466|ENST00000358602|ANKRD17;nc|ENSG00000131503|Q8IWZ3-2|ANKHD1;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;nc|ENSG00000131503|Q8IWZ3-5|ANKHD1;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1;nc|ENSG00000132466|O75179-2|ANKRD17;nc|ENSG00000132466|O75179-3|ANKRD17;nc|ENSG00000132466|O75179-4|ANKRD17;nc|ENSG00000132466|O75179-5|ANKRD17;nc|ENSG00000132466|O75179-6|ANKRD17;nc|ENSG00000132466|O75179-7|ANKRD17	85.16082228582465	0.07850854922700509	3				NaN	NaN	0	NaN	6817	4784	11602
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11604	34.412	NaN	3480.9	30	0	248.57	0.106	+			633	ADVRKESVF	9	66	525.782426847918	1049.550300762636	2	525.7836303710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ADVRKESVF_	ENSG00000197410|ENST00000357232|DCHS2	40.77816245573522	0.41113185337114944	3				NaN	NaN	0	NaN	6818	4784	11602
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11605	34.414	NaN	2575.5	30	0	238.66	0.106	+			46336	VEKLEQLI	8	57	486.29195716307703	NaN	0	486.2924499511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VEKLEQLI_	ENSG00000188906|ENST00000298910|LRRK2;LRRK2|p.K1328Rfs*8|1|0.21|ENSG00000188906|chr12:40308485-40308485|A/-|frameshift_variant;LRRK2|p.N2261Kfs*9|1|0.28|ENSG00000188906|chr12:40356119-40356120|-/A|frameshift_variant;LRRK2|p.R1639Gfs*15|1|0.59|ENSG00000188906|chr12:40320068-40320068|A/-|frameshift_variant;LRRK2|p.R1639Kfs*13|1|0.36|ENSG00000188906|chr12:40320067-40320068|-/A|frameshift_variant	39.252832667884924	1.7418937515398478	3				NaN	NaN	0	NaN	6819	4784	11602
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11606	34.416	NaN	1679.4	30	0	391.34	0.035	+			31720	QNVTSFLIG	9	53	489.7667496569197	977.5189463806395	2	489.76654052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QNVTSFLIG_	ENSG00000244694|ENST00000339488|PTCHD4;nc|ENSG00000244694|Q6ZW05-4|PTCHD4;nc|ENSG00000244694|Q6ZW05|PTCHD4;PTCHD4|p.F810Sfs*25|1|0.45|ENSG00000244694|chr6:47878415-47878415|A/-|frameshift_variant	58.78195531508484	0.22376836668196862	3				NaN	NaN	0	NaN	6820	4784	11602
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11612	34.432	NaN	10971	30	0	3154.4	0.214	+			4641	ATLPPITVTSK	11	69	564.337366929102	1126.660180925004	2	564.3377075195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATLPPITVTSK_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	51.52775601994872	0.4002081502334604	3				NaN	NaN	0	NaN	6823	4787	11611
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11613	34.436	NaN	5642.3	30	0	1324.9	0.106	+			32234	QTFLLQTTK	9	59	540.308503335699	1078.602453738198	2	540.3096313476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QTFLLQTTK_	ENSG00000149480|ENST00000278823|MTA2;MTA2|p.A568Qfs*29|1|0.23|ENSG00000149480|chr11:62594402-62594402|T/-|frameshift_variant;MTA2|p.I556Hfs*8|1|0.29|ENSG00000149480|chr11:62594543-62594544|-/C|frameshift_variant;nc|ENSG00000149480|O94776-2|MTA2	74.1650062923329	0.12277912660386392	3				NaN	NaN	0	NaN	6824	4787	11611
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11614	34.438	NaN	1424.2	30	0	213.31	0.106	+			14	AAAAVKVA	8	32	350.7215284000419	699.4285038668838	2	350.7212829589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AAAAVKVA_	tr|U7SWG5|U7SWG5_FUSNUCobalt-precorrin-5BC(1)-methyltransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=cbiDPE=3SV=1	37.028477286268924	0.6747514403204248	3				NaN	NaN	0	NaN	6825	4787	11611
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11615	34.439	NaN	3028.9	30	0	415.73	0.106	+			27218	MEKGDMVTL	9	59	512.2457018809029	1022.4768508286057	2	512.2465209960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MEKGDMVTL_	ENSG00000182551|ENST00000327435|ADI1;nc|ENSG00000182551|Q9BV57-2|ADI1	54.722347961057174	0.257609425301511	3				NaN	NaN	0	NaN	6826	4787	11611
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11616	34.441	NaN	2260.2	30	0	157.84	0.106	+			23283	KYLSGIAHF	9	62	518.2849990832927	NaN	0	518.2839965820312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KYLSGIAHF_	ENSG00000165688|ENST00000371717|PMPCA;ENST00000371720.5_1_9:139305120-139310743:+|nuORF;PMPCA|p.E101D|1|0.05|ENSG00000165688|chr9:136412518-136412518|A/C|missense_variant	56.72105179125745	0.16330365735109603	3				NaN	NaN	0	NaN	6827	4787	11611
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11617	34.443	NaN	1414.1	30	0	148.28	0.106			+	42680	TCDYVASVV	9	49	478.7236413742211	NaN	0	478.723388671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TCDYVASVV_	REV__AGPAT4|p.R303Gfs*7|1|0.33|ENSG00000026652|chr6:161139557-161139557|G/-|frameshift_variant;REV__ENSG00000026652|ENST00000320285|AGPAT4	40.5726180659479	0.27166212580479165	3				NaN	NaN	0	NaN	6828	4787	11611
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11618	34.445	NaN	1604.3	30	0	147.8	0.036			+	46054	VCGLLLRWV	9	65	529.8144326138826	1057.614312294565	2	529.8154907226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VCGLLLRWV_	REV__TRIM4|p.N373Tfs*57|1|0.3|ENSG00000146833|chr7:99892548-99892548|T/-|frameshift_variant	35.200714571348534	0.47427825964483533	3				NaN	NaN	0	NaN	6829	4787	11611
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11623	34.459	NaN	2275.6	30	0	208.5	0.214	+			17561	IEAALRESL	9	59	501.2855869677335	1000.556621002267	2	501.2852783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IEAALRESL_	ENSG00000112576|ENST00000372991|CCND3;nc|ENSG00000112576|P30281-2|CCND3;nc|ENSG00000112576|P30281-3|CCND3;nc|ENSG00000112576|P30281-4|CCND3	41.42661286455405	0.403525789677298	3				NaN	NaN	0	NaN	6831	4790	11622
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11624	34.463	NaN	3621.8	30	0	362.37	0.106			+	49737	VYNQLLGAGL	10	64	524.2955024512082	1046.5764519692164	2	524.2958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYNQLLGAGL_	REV__ENSG00000105281|ENST00000542575|SLC1A5;REV__nc|ENSG00000105281|Q15758-2|SLC1A5;REV__nc|ENSG00000105281|Q15758-3|SLC1A5	60.97194046774394	0.3570005369683776	3				NaN	NaN	0	NaN	6832	4790	11622
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11625	34.465	NaN	2943	30	0	675.92	0.106			+	9954	ERDLLVIA	8	56	464.7767992794536	927.5390456257072	2	464.7765197753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ERDLLVIA_	REV__ENSG00000114491|ENST00000232607|UMPS;REV__nc|ENSG00000114491|P11172-3|UMPS	44.53106598305862	0.628196326904373	3				NaN	NaN	0	NaN	6833	4790	11622
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11626	34.466	NaN	3357.5	30	0	279.12	0.106			+	-1	CKWMENLA	8	73	526.2395902470586	NaN	0	526.2386474609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_C(Carbamidomethyl (C))KWMENLA_	REV__ENSG00000083642|ENST00000315596|PDS5B;REV__ENSG00000121892|ENST00000303538|PDS5A;REV__nc|ENSG00000083642|Q9NTI5-2|PDS5B;REV__nc|ENSG00000121892|Q29RF7-3|PDS5A;REV__PDS5B|p.G721Dfs*35|1|0.13|ENSG00000083642|chr13:32732132-32732132|A/-|frameshift_variant;REV__PDS5B|p.K1268Rfs*8|1|0.07|ENSG00000083642|chr13:32770296-32770296|A/-|frameshift_variant;REV__PDS5B|p.K1287Rfs*22|1|0.26|ENSG00000083642|chr13:32770351-32770351|A/-|frameshift_variant;REV__PDS5B|p.K693Qfs*8|1|0.11|ENSG00000083642|chr13:32710054-32710055|-/T|frameshift_variant;REV__PDS5B|p.N1390Cfs*12|1|0.44|ENSG00000083642|chr13:32770750-32770751|AA/-|frameshift_variant;REV__PDS5B|p.S1198Vfs*10|1|0.28|ENSG00000083642|chr13:32764556-32764556|A/-|frameshift_variant	37.15910966729921	1.7418937515398478	3				NaN	NaN	0	NaN	6834	4790	11622
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11627	34.468	NaN	1597.7	30	0	393.72	0.036				-1	 	0	51	558.2492200451707	1114.4838871571412	2	558.2504272460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	6835	4790	11622
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11632	34.483	NaN	4187.3	30	0	397.13	0.214	+			35835	SEDDVKMAL	9	64	504.23922926723253	1006.4639056012651	2	504.23870849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEDDVKMAL_	ENSG00000169813|ENST00000682386|HNRNPF	75.04331003522576	0.118981335847003	3				NaN	NaN	0	NaN	6837	4793	11631
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11633	34.486	NaN	4027.4	30	0	1324.9	0.106	+			49888	VYTSGVYHI	9	60	519.7668642695962	1037.5191756059924	2	519.767333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYTSGVYHI_	ENSG00000111077|ENST00000314250|TNS2;ENST00000549311.7_1_12:53443879-53456445:+|nuORF;nc|ENSG00000111077|Q63HR2-2|TNS2;nc|ENSG00000111077|Q63HR2-4|TNS2;nc|ENSG00000111077|Q63HR2-5|TNS2;nc|ENSG00000111077|Q63HR2-6|TNS2;TNS2|p.G362Rfs*43|1|0.33|ENSG00000111077|chr12:53058087-53058088|-/A|frameshift_variant;TNS2|p.K660Nfs*96|1|0.2|ENSG00000111077|chr12:53059615-53059615|G/-|frameshift_variant;TNS2|p.P495Rfs*25|2|0.33|ENSG00000111077|chr12:53059119-53059119|C/-|frameshift_variant	50.0245360154114	0.3026755932229825	3				NaN	NaN	0	NaN	6838	4793	11631
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11634	34.488	NaN	1765.7	30	0	154	0.106	+			1919	AISAALKPAL	10	60	477.80315157586074	953.5917502185215	2	477.8018493652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AISAALKPAL_	ENSG00000175336|ENST00000398189|APOF	47.657333605630114	0.47858658696240314	3				NaN	NaN	0	NaN	6839	4793	11631
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11635	34.49	NaN	1599.1	30	0	164.78	0.036			+	11992	FVSKFDLSN	9	61	528.7722127781465	1055.5298726230928	2	528.77294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FVSKFDLSN_	REV__ENSG00000162039|ENST00000325962|MEIOB;REV__ENST00000490154.1_1_16:1887712-1889402:-|nuORF;REV__nc|ENSG00000162039|Q8N635|MEIOB	35.61828744233558	0.47037581924408073	3				NaN	NaN	0	NaN	6840	4793	11631
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11640	34.504	NaN	8613.4	30	0	1218.4	0.214	+			49535	VYANGQHLF	9	68	524.7642549408383	1047.5139569484766	2	524.7644653320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYANGQHLF_	ENSG00000171747|ENST00000307751|LGALS4	106.41520541750704	0.03265588207292361	3				NaN	NaN	0	NaN	6842	4796	11639
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11641	34.508	NaN	1439.4	30	0	309.52	0.106	+			22748	KVDGAYVAV	9	44	461.25576625853864	920.4969795838773	2	461.256103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVDGAYVAV_	ENSG00000104517|ENST00000520539|UBR5;nc|ENSG00000104517|O95071-2|UBR5;UBR5|p.A1046Rfs*49|1|0.21|ENSG00000104517|chr8:102299518-102299519|-/G|frameshift_variant;UBR5|p.E2121Kfs*28|1|0.39|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant;UBR5|p.E2121Rfs*13|1|0.28|ENSG00000104517|chr8:102277120-102277121|-/T|frameshift_variant;UBR5|p.F2571Lfs*4|2|0.31|ENSG00000104517|chr8:102262044-102262044|A/-|frameshift_variant;UBR5|p.I1021*|1|0.41|ENSG00000104517|chr8:102300046-102300046|G/-|frameshift_variant;UBR5|p.I1021Hfs*5|1|0.23|ENSG00000104517|chr8:102300045-102300046|-/G|frameshift_variant;UBR5|p.K2120Rfs*13|1|0.24|ENSG00000104517|chr8:102277121-102277122|TT/-|frameshift_variant	34.172542307311794	0.4838870758800184	3				NaN	NaN	0	NaN	6843	4796	11639
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11642	34.51	NaN	2632.4	30	0	210.81	0.106			+	-1	YMFLARIGAM	10	77	602.7962891525127	1203.5780253718253	2	602.7940673828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Oxidation (M)	_YM(Oxidation (M))FLARIGAM(Oxidation (M))_	REV__nc|ENSG00000211791|A0A0B4J235|TRAV13-2	45.9519527083369	0.4943008177357963	3				NaN	NaN	0	NaN	6844	4796	11639
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11643	34.511	NaN	1233.1	30	0	220.19	0.106			+	-1	FARTTAKY	8	51	500.26705648638057	998.5195600395612	2	500.2658386230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))FARTTAKY_	REV__ENSG00000096433|ENST00000605930|ITPR3;REV__ITPR3|p.A1566T|1|0.25|ENSG00000096433|chr6:33683305-33683305|G/A|missense_variant;REV__ITPR3|p.N1746Tfs*30|1|0.2|ENSG00000096433|chr6:33684872-33684872|A/-|frameshift_variant;REV__ITPR3|p.R2604Gfs*30|1|0.27|ENSG00000096433|chr6:33694944-33694944|C/-|frameshift_variant	27.882242232435846	0.7440473649773525	3				NaN	NaN	0	NaN	6845	4796	11639
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11644	34.513	NaN	1532.7	30	0	246.8	0.033			+	13316	GKIGTQQLG	9	45	451.25803787321286	NaN	0	451.2582702636719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GKIGTQQLG_	REV__ENST00000308330.2_1_12:65564134-65564248:+|nuORF	56.72105179125745	0.16330365735109603	3				NaN	NaN	0	NaN	6846	4796	11639
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11650	34.529	NaN	2002.2	30	0	156.06	0.214			+	32830	RCKEPMLP	8	58	487.2507797446674	NaN	0	487.25079345703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RCKEPMLP_	REV__HHIP|p.E593K|1|0.1|ENSG00000164161|chr4:144734757-144734757|G/A|missense_variant	60.29395666154354	1.7418937515398478	3				NaN	NaN	0	NaN	6849	4799	11649
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11651	34.533	NaN	2575.7	30	0	426.96	0.106			+	51197	YPLLHEGI	8	60	471.258578657343	940.502604381486	2	471.2579650878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YPLLHEGI_	REV__ENSG00000153827|ENST00000675903|TRIP12;REV__ENST00000470302.5_1_2:230656574-230657731:-|nuORF;REV__nc|ENSG00000153827|Q14669-2|TRIP12;REV__nc|ENSG00000153827|Q14669-3|TRIP12;REV__nc|ENSG00000153827|Q14669-4|TRIP12;REV__nc|ENSG00000153827|Q14669|TRIP12;REV__TRIP12|p.H1434Afs*2|1|0.16|ENSG00000153827|chr2:229791143-229791144|-/T|frameshift_variant;REV__TRIP12|p.Y1552Lfs*6|1|0.12|ENSG00000153827|chr2:229787620-229787621|-/A|frameshift_variant	35.200714571348534	0.6875396545722289	3				NaN	NaN	0	NaN	6850	4799	11649
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11652	34.535	NaN	1494	30	0	236.13	0.106	+			5158	ATSVVSFVR	9	54	483.2744496092012	964.5343462852024	2	483.274658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATSVVSFVR_	ENSG00000162817|ENST00000294889|C1orf115	35.15202426646627	0.4747332964206883	3				NaN	NaN	0	NaN	6851	4799	11649
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11653	34.537	NaN	1715.1	30	0	220.28	0.106	+			4928	ATQNQLLFH	9	60	536.2820618200975	NaN	0	536.2822875976562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATQNQLLFH_	ENSG00000139116|ENST00000361418|KIF21A;KIF21A|p.L1270Sfs*13|1|0.12|ENSG00000139116|chr12:39318174-39318175|-/G|frameshift_variant;KIF21A|p.P1541Lfs*6|1|0.27|ENSG00000139116|chr12:39303074-39303074|G/-|frameshift_variant;nc|ENSG00000139116|Q7Z4S6-2|KIF21A;nc|ENSG00000139116|Q7Z4S6-3|KIF21A;nc|ENSG00000139116|Q7Z4S6-4|KIF21A;nc|ENSG00000139116|Q7Z4S6-5|KIF21A;nc|ENSG00000139116|Q7Z4S6-6|KIF21A	40.77816245573522	0.2702456086868081	3				NaN	NaN	0	NaN	6852	4799	11649
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11654	34.538	NaN	1542.8	30	0	301	0.106			+	17346	IAKEQANQI	9	58	507.78223912724764	1013.5499253212953	2	507.7825927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IAKEQANQI_	REV__ENST00000400566.5_1_21:15893501-15918613:-|nuORF	37.81151784470057	0.4459294069877048	3				NaN	NaN	0	NaN	6853	4799	11649
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11655	34.54	NaN	1246.2	30	0	268.02	0.035	+			47065	VLHALLENV	9	33	336.53440929680414	1006.5813984906124	3	336.5340270996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VLHALLENV_	ENSG00000133302|ENST00000265140|SLF1	12.959181472943097	0.6112419832031292	3				NaN	NaN	0	NaN	6854	4799	11649
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11660	34.555	NaN	5562.8	30	0	1064.2	0.214	+			47405	VPNKVIQCF	9	71	552.7971717448812	1103.5797905565623	2	552.7974853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_VPNKVIQC(Carbamidomethyl (C))F_	CLTC|p.A1374*|1|0.05|ENSG00000141367|chr17:59683464-59683465|-/TA|frameshift_variant;CLTC|p.D632Yfs*7|1|0.15|ENSG00000141367|chr17:59666589-59666590|-/TTACA|frameshift_variant;ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000141367|Q00610-2|CLTC	108.08749611321984	0.03094949498378333	3				NaN	NaN	0	NaN	6856	4802	11659
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11661	34.558	NaN	1693.4	30	0	164.09	0.106	+			23401	LAALPHSCL	9	58	491.26326544317527	980.5119779531506	2	491.2632751464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LAALPHSC(Carbamidomethyl (C))L_	ENSG00000143248|ENST00000313961|RGS5;nc|ENSG00000143248|O15539-3|RGS5;RGS5|p.N90Tfs*40|1|0.22|ENSG00000143248|chr1:163152665-163152665|T/-|frameshift_variant;RGS5|p.P30Ffs*54|1|0.05|ENSG00000143248|chr1:163168325-163168326|-/AA|frameshift_variant;RGS5|p.P30Lfs*54|1|0.05|ENSG00000143248|chr1:163168324-163168325|-/TA|frameshift_variant	57.81127852772723	0.2318599694398087	3				NaN	NaN	0	NaN	6857	4802	11659
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11662	34.56	NaN	1725.8	30	0	130.47	0.106			+	48108	VSTVAGALFAE	11	65	532.7865600585938	NaN	0	532.7865600585938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSTVAGALFAE_	REV__ENSG00000161179|ENST00000292778|YDJC;REV__ENST00000468686.5_1_22:21984138-21984303:-|nuORF;REV__nc|ENSG00000161179|A8MPS7-2|YDJC;REV__nc|ENSG00000161179|A8MPS7-3|YDJC	45.97224482568171	0.34424757290527136	3				NaN	NaN	0	NaN	6858	4802	11659
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11663	34.562	NaN	1527.2	30	0	109.48	0.04	+			26921	LYFPEEKQEW	10	67	684.8269653320312	NaN	0	684.8269653320312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LYFPEEKQEW_	ENSG00000025796|ENST00000369002|SEC63	21.9598887501803	0.4201028297492154	3				NaN	NaN	0	NaN	6859	4802	11659
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11669	34.578	NaN	4791.8	30	0	624.56	0.214	+			49926	VYVERAEVL	9	68	539.3009071974769	1076.5872614617538	2	539.3016357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYVERAEVL_	ENSG00000089234|ENST00000419234|BRAP	62.107414245175825	0.1960472003779324	3				NaN	NaN	0	NaN	6862	4805	11668
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11670	34.581	NaN	2519.1	30	0	497.58	0.106			+	7092	CVSTLGSNVL	10	61	496.75794785708155	991.5013427809631	2	498.25616455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_CVSTLGSNVL_	REV__ENSG00000162711|ENST00000336119|NLRP3;REV__ENST00000532083.1_1_1:247607259-247611803:+|nuORF;REV__nc|ENSG00000162711|Q96P20-2|NLRP3;REV__nc|ENSG00000162711|Q96P20-4|NLRP3;REV__nc|ENSG00000162711|Q96P20-5|NLRP3;REV__nc|ENSG00000162711|Q96P20-6|NLRP3;REV__nc|ENSG00000162711|Q96P20|NLRP3	33.921630207806714	0.6028135429846169	3				NaN	NaN	0	NaN	6863	4805	11668
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11671	34.583	NaN	2275	30	0	149.08	0.106			+	11798	FSRRFIDL	8	71	527.2950607176082	NaN	0	527.29541015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FSRRFIDL_	REV__ENSG00000166348|ENST00000687698|USP54;REV__ENST00000498143.5_1_10:75279553-75335416:-|nuORF;REV__nc|ENSG00000166348|Q70EL1-4|USP54;REV__nc|ENSG00000166348|Q70EL1-6|USP54;REV__nc|ENSG00000166348|Q70EL1-7|USP54;REV__USP54|p.R831Tfs*6|1|0.07|ENSG00000166348|chr10:73519973-73519983|CAGGGCAAGTC/-|frameshift_variant	55.50420428727701	1.7418937515398478	3				NaN	NaN	0	NaN	6864	4805	11668
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11672	34.585	NaN	2957.8	30	0	624.01	0.106	+			46488	VETQKTFTL	9	66	533.7930839069494	1065.5716148806987	2	533.7923583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VETQKTFTL_	ENSG00000128833|ENST00000261839|MYO5C;ENST00000558902.5_1_15:52548900-52571163:-|nuORF;ENST00000560809.5_1_15:52557394-52562028:-|nuORF;MYO5C|p.E1050Sfs*8|1|0.32|ENSG00000128833|chr15:52229192-52229192|C/-|frameshift_variant;MYO5C|p.I480Nfs*10|1|0.5|ENSG00000128833|chr15:52253414-52253415|-/T|frameshift_variant;MYO5C|p.L1151Wfs*19|1|0.17|ENSG00000128833|chr15:52223719-52223719|A/-|frameshift_variant;MYO5C|p.L933Hfs*33|1|0.04|ENSG00000128833|chr15:52237552-52237553|-/T|frameshift_variant;MYO5C|p.L933Sfs*35|1|0.04|ENSG00000128833|chr15:52237553-52237554|-/AAGTGGA|frameshift_variant;nc|ENSG00000128833|Q9NQX4-2|MYO5C	59.93077597824379	0.21419174904018318	3				NaN	NaN	0	NaN	6865	4805	11668
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11673	34.587	NaN	1447.4	30	0	209.58	0.106			+	10773	FAGLVTVGAP	10	53	466.26696837201365	NaN	0	466.2672424316406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FAGLVTVGAP_	REV__ENSG00000139200|ENST00000534837|PIANP;REV__nc|ENSG00000139200|Q8IYJ0|PIANP	37.15910966729921	0.3781637092648983	3				NaN	NaN	0	NaN	6866	4805	11668
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11674	34.589	NaN	2066.5	30	0	119.17	0.037	+			33082	REKMTQIMF	9	58	592.3020396663493	1182.5895263994985	2	592.302490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_REKMTQIMF_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196604|ENST00000409914|POTEF;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000415776.1_1_Y:19869357-19869702:-|nuORF;ENST00000446382.2_1_9:6834760-6835018:+|nuORF;ENST00000457622.1_1_6:46172676-46173294:+|nuORF;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;nc|ENSG00000204434|Q9BYX7|POTEKP	33.921630207806714	0.48623198279849766	3				NaN	NaN	0	NaN	6867	4805	11668
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11681	34.605	NaN	12738	30	0	3560.1	0.143	+			4240	ATGDMSGLLK	10	70	496.75794785708155	991.5013427809631	2	496.7574462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATGDMSGLLK_	ENSG00000127837|ENST00000248450|AAMP;ENST00000475678.5_1_2:219131145-219134809:-|nuORF;ENST00000489767.5_1_2:219130391-219134818:-|nuORF	140.11223852658463	0.010724162804194332	3				NaN	NaN	0	NaN	6871	4808	11680
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11687	34.623	NaN	1992.6	30	0	302.98	0.214	+			24456	LGFGISVLQ	9	61	467.2734614720693	932.5323700109386	2	467.2733154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LGFGISVLQ_	ENST00000382159.7_1_19:2520718-2646275:-|nuORF	34.172542307311794	0.4838870758800184	3				NaN	NaN	0	NaN	6874	4811	11686
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11688	34.627	NaN	1451.9	30	0	49.427	0.106			+	31555	QLNEKLII	8	54	485.8000393218571	NaN	0	485.7998962402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QLNEKLII_	REV__tr|U7T6M6|U7T6M6_FUSNUP-typeconjugativetransferproteinTrbGOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00299PE=3SV=1	37.15910966729921	1.7418937515398478	3				NaN	NaN	0	NaN	6875	4811	11686
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11689	34.629	NaN	1899.4	30	0	219.49	0.106	+			2274	ALYGVVNVK	9	59	481.7867654598026	961.5589779864052	2	481.786865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ALYGVVNVK_	ENSG00000135108|ENST00000622495|FBXO21;nc|ENSG00000135108|O94952|FBXO21	73.97473282117947	0.12360187025703594	3				NaN	NaN	0	NaN	6876	4811	11686
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11690	34.631	NaN	1802.9	30	0	109.38	0.035	+			18700	ITEADKAFK	9	59	511.7796930269411	1021.5448331206823	2	511.77984619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ITEADKAFK_	ENST00000373344.9_1_X:77041479-77041623:-|nuORF	39.252832667884924	0.4290233611298554	3				NaN	NaN	0	NaN	6877	4811	11686
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11694	34.644	NaN	2515.4	30	0	255.29	0.214	+			47999	VSQGQLVVM	9	58	480.7629799830279	959.5114070328558	2	480.7622375488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSQGQLVVM_	ENSG00000155660|ENST00000652332|PDIA4	58.78195531508484	0.22376836668196862	3				NaN	NaN	0	NaN	6878	4814	11693
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11695	34.648	NaN	2032.7	30	0	240.52	0.106	+			12812	GEMTLKSAL	9	58	475.25621685813474	948.4978807830695	2	475.25439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEMTLKSAL_	ENSG00000041357|ENST00000044462|PSMA4;nc|ENSG00000041357|P25789-2|PSMA4	90.60085204095205	0.06317133949006545	3				NaN	NaN	0	NaN	6879	4814	11693
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11696	34.65	NaN	1233.8	30	0	121.63	0.106	+			6377	AVVAAASQAE	10	47	458.7403161822639	NaN	0	458.740478515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVVAAASQAE_	ENSG00000117385|ENST00000296388|P3H1;ENST00000460031.5_1_1:43220834-43232642:-|nuORF;ENST00000492956.1_1_1:43227954-43232675:-|nuORF;ENST00000495874.5_1_1:43222117-43232675:-|nuORF;nc|ENSG00000117385|Q32P28-2|P3H1;nc|ENSG00000117385|Q32P28-3|P3H1;nc|ENSG00000117385|Q32P28-4|P3H1;P3H1|p.R359Vfs*40|1|0.29|ENSG00000117385|chr1:42757788-42757788|G/-|frameshift_variant	36.446750945000026	0.3805027428805705	3				NaN	NaN	0	NaN	6880	4814	11693
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11697	34.652	NaN	1632.4	30	0	162.34	0.035			+	27335	MIGASTTLAI	10	49	489.2690053473948	976.5234577615896	2	489.268798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MIGASTTLAI_	REV__ENST00000406202.2_1_6:157297523-157298164:+|nuORF	34.172542307311794	0.6007644933930345	3				NaN	NaN	0	NaN	6881	4814	11693
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11701	34.666	NaN	5810.4	30	0	693.95	0.214	+			50661	YEEELREL	8	78	540.7649031398648	1079.5152533465296	2	540.7642822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YEEELREL_	ENSG00000175084|ENST00000373960|DES	56.43379154798735	0.5370864305160253	3				NaN	NaN	0	NaN	6882	4817	11700
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11702	34.669	NaN	1782.2	30	0	164.41	0.106	+			30528	QAIKIISII	9	67	499.83409557432634	NaN	0	499.8343811035156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QAIKIISII_	ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;TRRAP-ASNS|1|fusion;TRRAP-ASNS|2|fusion;TRRAP|p.K3443Sfs*19|1|0.28|ENSG00000196367|chr7:99004246-99004246|A/-|frameshift_variant	40.77816245573522	0.2702456086868081	3				NaN	NaN	0	NaN	6883	4817	11700
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11703	34.671	NaN	1942.7	30	0	106.7	0.106	+			48745	VTVGVDGTLYK	11	63	576.3192908618021	1150.624028790404	2	576.3187866210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTVGVDGTLYK_	ENSG00000156515|ENST00000359426|HK1;ENSG00000159399|ENST00000290573|HK2;ENST00000447818.2_1_X:79827372-79827747:-|nuORF;nc|ENSG00000156515|P19367-2|HK1;nc|ENSG00000156515|P19367-3|HK1;nc|ENSG00000156515|P19367-4|HK1	42.33807565288922	0.5259510355945483	3				NaN	NaN	0	NaN	6884	4817	11700
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11704	34.673	NaN	1387.7	30	0	189.18	0.037	+			31988	QREPDGTKNE	10	68	587.2769775390625	NaN	0	587.2769775390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QREPDGTKNE_	ENSG00000186376|ENST00000370766|ZNF75D;nc|ENSG00000186376|P51815-2|ZNF75D	29.170058357718403	0.40439580130713204	3				NaN	NaN	0	NaN	6885	4817	11700
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11708	34.687	NaN	2355.1	30	0	408.81	0.214	+			29096	NTMQQFLQK	9	68	569.289595232864	1136.564637532528	2	569.2892456054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NTMQQFLQK_	ENSG00000071859|ENST00000393600|FAM50A	61.691277971877994	0.19951612995419254	3				NaN	NaN	0	NaN	6886	4820	11707
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11709	34.69	NaN	2445.7	30	0	592.17	0.106			+	10243	ETKIVIKVD	9	43	348.8815551356621	1043.6228360071864	3	349.2155456542969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ETKIVIKVD_	REV__ENSG00000181220|ENST00000458143|ZNF746;REV__nc|ENSG00000181220|Q6NUN9-2|ZNF746;REV__nc|ENSG00000181220|Q6NUN9-3|ZNF746;REV__nc|ENSG00000181220|Q6NUN9|ZNF746	51.52775601994872	0.28504342437107444	3				NaN	NaN	0	NaN	6887	4820	11707
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11710	34.692	NaN	1612.4	30	0	174.39	0.039			+	-1	GPPCSCRYGNI	11	50	640.7785573998103	NaN	0	640.7796020507812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_GPPC(Carbamidomethyl (C))SC(Carbamidomethyl (C))RYGNI_	REV__ENSG00000184916|ENST00000331782|JAG2;REV__ENST00000546616.1_1_14:105609034-105613077:-|nuORF;REV__nc|ENSG00000184916|Q9Y219-2|JAG2	26.063383197487333	0.44926255568796863	3				NaN	NaN	0	NaN	6888	4820	11707
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11716	34.707	NaN	11826	30	0	3174.5	0.214	+			30488	QAFAQVFNK	9	77	526.7800944438352	1051.5456359544703	2	526.7801513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QAFAQVFNK_	BZW1|p.N285Tfs*11|2|0.26|ENSG00000082153|chr2:200818782-200818782|A/-|frameshift_variant;BZW1|p.N286*|1|0.04|ENSG00000082153|chr2:200818790-200818791|-/T|frameshift_variant;BZW1|p.S325Rfs*19|1|0.04|ENSG00000082153|chr2:200819989-200819990|-/ACAATATAGAA|frameshift_variant;ENSG00000082153|ENST00000409600|BZW1;nc|ENSG00000082153|Q7L1Q6-2|BZW1;nc|ENSG00000082153|Q7L1Q6-3|BZW1;nc|ENSG00000082153|Q7L1Q6-4|BZW1	93.19546047674547	0.05585629608842056	3				NaN	NaN	0	NaN	6891	4823	11715
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11717	34.71	NaN	2288.5	30	0	215.49	0.106	+			36481	SEVTAALRV	9	55	473.2719561638427	944.5293593944854	2	473.2710876464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEVTAALRV_	EEF2|p.E241Rfs*13|1|0.26|ENSG00000167658|chr19:3982316-3982316|C/-|frameshift_variant;ENSG00000167658|ENST00000309311|EEF2	75.04331003522576	0.118981335847003	3				NaN	NaN	0	NaN	6892	4823	11715
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11718	34.712	NaN	2666.3	30	0	189.58	0.106			+	11247	FILFLRRFWWR	11	65	547.3177355117456	1638.9313771354366	3	547.6515502929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FILFLRRFWWR_	REV__ENST00000281830.3_1_2:223918801-223918864:+|nuORF	14.693671053092006	0.8016877026820449	3				NaN	NaN	0	NaN	6893	4823	11715
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11719	34.714	NaN	2981.5	30	0	162.04	0.106	+			23370	KYYKGSLSY	9	63	554.7874069501805	1107.560260967161	2	554.7874145507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KYYKGSLSY_	ENSG00000117984|ENST00000236671|CTSD;ENST00000497544.2_2_11:1775127-1776230:-|nuORF	35.61828744233558	0.47037581924408073	3				NaN	NaN	0	NaN	6894	4823	11715
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11720	34.716	NaN	2588.4	30	0	373.58	0.106				-1	MTNRLLQR	8	64	537.2981882104018	1072.5818234876035	2	537.80126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))MTNRLLQR_	ENSG00000138326|ENST00000372360|RPS24;ENSG00000154027|ENST00000354567|AK5;ENST00000465692.1_1_10:79795142-79808843:+|nuORF;ENST00000466129.5_1_10:79793659-79795541:+|nuORF;ENST00000478655.5_1_10:79793659-79797065:+|nuORF;ENST00000485708.6_1_10:79793659-79797725:+|nuORF;nc|ENSG00000138326|P62847-3|RPS24;nc|ENSG00000138326|P62847-4|RPS24;nc|ENSG00000138326|P62847|RPS24;nc|ENSG00000154027|Q9Y6K8-2|AK5;nc|ENSG00000154027|Q9Y6K8-3|AK5	38.80614096846853	0.6637206697844082	3				NaN	NaN	0	NaN	6895	4823	11715
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11721	34.718	NaN	992.27	30	0	157.13	0.106			+	29557	PESSLPFSF	9	55	505.7436628618792	1009.4727727905585	2	505.74273681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PESSLPFSF_	REV__ENSG00000175899|ENST00000318602|A2M	55.50420428727701	0.2510918378945873	3				NaN	NaN	0	NaN	6896	4823	11715
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11722	34.72	NaN	3626.7	30	0	312.26	0.034	+			1653	AGPMRQISL	9	58	486.76833561542185	971.5221182976437	2	486.76739501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AGPMRQISL_	ENSG00000081019|ENST00000261441|RSBN1;ENSG00000187257|ENST00000334955|RSBN1L;ENST00000476412.5_1_1:114308604-114340019:-|nuORF;nc|ENSG00000187257|Q6PCB5-2|RSBN1L;PTPN12-RSBN1L|1|fusion;PTPN12-RSBN1L|2|fusion;PTPN12-RSBN1L|3|fusion;PTPN12-RSBN1L|4|fusion;PTPN12-RSBN1L|5|fusion;PTPN12-RSBN1L|6|fusion;PTPN12-RSBN1L|7|fusion;PTPN12-RSBN1L|8|fusion;RSBN1L|p.N549Ifs*27|1|0.34|ENSG00000187257|chr7:77773162-77773162|A/-|frameshift_variant	47.657333605630114	0.33044192980041115	3				NaN	NaN	0	NaN	6897	4823	11715
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11726	34.734	NaN	3242.4	30	0	343.31	0.214	+			28882	NQEQFLLL	8	62	502.7745268816979	1003.5345008301958	2	502.77423095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NQEQFLLL_	COPS7A|p.A25Qfs*55|1|0.32|ENSG00000111652|chr12:6724725-6724725|G/-|frameshift_variant;COPS7A|p.T219Pfs*21|2|0.21|ENSG00000111652|chr12:6730681-6730681|A/-|frameshift_variant;ENSG00000111652|ENST00000543155|COPS7A	52.936696900407355	0.5717071646657654	3				NaN	NaN	0	NaN	6898	4826	11725
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11727	34.737	NaN	2844.6	30	0	355.94	0.106	+			14574	GTFSKLFGK	9	62	492.7797282780977	983.5449036229954	2	492.7790222167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTFSKLFGK_	ENSG00000188112|ENST00000341865|C6orf132;nc|nan|Q5T0Z8-2|C6orf132;nc|nan|Q5T0Z8-4|C6orf132	44.377184641726394	0.36891676396732553	3				NaN	NaN	0	NaN	6899	4826	11725
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11728	34.739	NaN	1715.4	30	0	169.83	0.037			+	-1	WLGCLETSR	9	62	561.274814578229	1120.5350762232579	2	561.2744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_WLGC(Carbamidomethyl (C))LETSR_	REV__ENSG00000213398|ENST00000264005|LCAT	35.61828744233558	0.47037581924408073	3				NaN	NaN	0	NaN	6900	4826	11725
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11733	34.753	NaN	2889.2	30	0	480.35	0.214	+			50662	YEEELREL	8	63	540.7649031398648	1079.5152533465296	2	540.7664794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YEEELREL_	ENSG00000175084|ENST00000373960|DES	45.97224482568171	0.6192535143389125	3				NaN	NaN	0	NaN	6902	4829	11732
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11734	34.757	NaN	2023.4	30	0	496.02	0.106			+	50188	WLMASVCSLIA	11	61	597.306537222729	1192.598521512258	2	597.8074340820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WLMASVCSLIA_	REV__ENST00000553142.5_1_12:58019947-58020121:-|nuORF	26.69291269510374	0.70980431218767	3				NaN	NaN	0	NaN	6903	4829	11732
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11735	34.759	NaN	1184.3	30	0	55.679	0.106	+			27090	MALVRGAEPAA	11	59	543.2926846456611	NaN	0	543.2929077148438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MALVRGAEPAA_	ENSG00000135631|ENST00000486777|RAB11FIP5;nc|ENSG00000135631|Q9BXF6|RAB11FIP5;RAB11FIP5|p.G488Vfs*25|2|0.3|ENSG00000135631|chr2:73088155-73088155|C/-|frameshift_variant	30.317721548370564	0.4303027717346894	3				NaN	NaN	0	NaN	6904	4829	11732
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11736	34.761	NaN	1029.2	30	0	73.619	0.106			+	48716	VTTSFGVAL	9	46	447.74987707832116	NaN	0	447.75018310546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTTSFGVAL_	REV__ENSG00000021645|ENST00000335750|NRXN3;REV__nc|ENSG00000021645|Q9HDB5-2|NRXN3;REV__nc|ENSG00000021645|Q9HDB5-3|NRXN3;REV__nc|ENSG00000021645|Q9HDB5-4|NRXN3;REV__nc|ENSG00000021645|Q9HDB5|NRXN3;REV__nc|ENSG00000021645|Q9Y4C0-3|NRXN3;REV__nc|ENSG00000021645|Q9Y4C0-4|NRXN3;REV__nc|ENSG00000021645|Q9Y4C0|NRXN3	40.5726180659479	0.27166212580479165	3				NaN	NaN	0	NaN	6905	4829	11732
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11737	34.763	NaN	1342	30	0	116.04	0.035	+			8764	EEGVTLFGR	9	58	504.2617087687565	1006.508864604313	2	505.7424621582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EEGVTLFGR_	ENST00000312280.7_1_17:15162478-15168500:-|nuORF	32.81241826257853	0.4965981579233955	3				NaN	NaN	0	NaN	6906	4829	11732
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11743	34.777	NaN	8077.6	30	0	2010.3	0.214	+			4642	ATLPPITVTSK	11	73	564.337366929102	1126.660180925004	2	564.3374633789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATLPPITVTSK_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	43.650786325866115	0.5079891456189096	3				NaN	NaN	0	NaN	6909	4832	11742
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11744	34.78	NaN	1336.1	30	0	150.58	0.035	+			29686	PGSNAVSSFY	10	51	514.7380730774872	NaN	0	514.7384643554688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PGSNAVSSFY_	ENST00000569912.1_1_22:40439522-40440098:-|nuORF	35.15202426646627	0.38475398474706135	3				NaN	NaN	0	NaN	6910	4832	11742
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11751	34.799	NaN	4132.1	30	0	797.77	0.214	+			13061	GFCCPLGGLAA	11	75	561.7569900540215	1121.4994271748428	2	561.75732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_GFC(Carbamidomethyl (C))C(Carbamidomethyl (C))PLGGLAA_	ENSG00000185504|ENST00000327787|FAAP100	71.37791200682192	0.22425249707831713	3				NaN	NaN	0	NaN	6914	4835	11750
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11752	34.802	NaN	1703	30	0	92.872	0.037			+	-1	RCPLPPLPGR	10	58	581.8279418945312	NaN	0	581.8279418945312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_RC(Carbamidomethyl (C))PLPPLPGR_	REV__ENST00000378756.7_1_1:1469448-1469529:+|nuORF	27.882242232435846	0.4086243523356342	3				NaN	NaN	0	NaN	6915	4835	11750
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11756	34.816	NaN	1887	30	0	163.75	0.214	+			14698	GTIGLALAR	9	49	436.2716672888929	870.5287816445858	2	436.2713928222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTIGLALAR_	ENSG00000099899|ENST00000252136|TRMT2A;ENST00000487668.5_1_22:20100432-20101310:-|nuORF;ENST00000494820.5_1_22:20100432-20103278:-|nuORF;nc|ENSG00000099899|Q8IZ69-2|TRMT2A	125.81401957644128	0.01768009863045738	3				NaN	NaN	0	NaN	6916	4838	11755
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11757	34.819	NaN	2618.7	30	0	217.23	0.106			+	12545	GEGELLVHY	9	66	508.75618541137555	1015.4978178895511	2	508.7563171386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEGELLVHY_	REV__ENSG00000137699|ENST00000341846|TRIM29;REV__nc|ENSG00000137699|Q14134-2|TRIM29;REV__TRIM29|p.T395I|1|0.82|ENSG00000137699|chr11:120125840-120125840|G/A|missense_variant	47.91560031466742	0.327412564698279	3				NaN	NaN	0	NaN	6917	4838	11755
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11758	34.821	NaN	1673.5	30	0	203.59	0.106			+	24000	LEAQRLIA	8	56	457.27697674121896	912.5394005492379	2	457.27667236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LEAQRLIA_	REV__ENSG00000120800|ENST00000261637|UTP20;REV__UTP20|p.A1865Sfs*12|1|0.08|ENSG00000120800|chr12:101356982-101356983|-/ATCCTTTAGTC|frameshift_variant	65.80317337860623	0.44433089765398776	3				NaN	NaN	0	NaN	6918	4838	11755
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11759	34.823	NaN	3074.7	30	0	295.67	0.035	+			7126	DAANLRETF	9	66	518.7569218690807	1035.4992908049612	2	518.7567749023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DAANLRETF_	ENSG00000164305|ENST00000308394|CASP3	42.86426827375447	0.38666266728046506	3				NaN	NaN	0	NaN	6919	4838	11755
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11764	34.837	NaN	2318.8	30	0	217.02	0.214	+			25306	LPAPPTQNM	9	62	484.74680078118354	967.4790486291671	2	484.7463684082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LPAPPTQNM_	ENSG00000141380|ENST00000415083|SS18;ENSG00000184402|ENST00000331758|SS18L1;nc|ENSG00000141380|Q15532-2|SS18;nc|ENSG00000184402|O75177-2|SS18L1;nc|ENSG00000184402|O75177-5|SS18L1;SS18|p.G113Vfs*11|1|0.35|ENSG00000141380|chr18:26057636-26057636|C/-|frameshift_variant	64.20726635412375	0.17854274437659667	3				NaN	NaN	0	NaN	6921	4841	11763
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11765	34.841	NaN	1523.9	30	0	90.997	0.106	+			6564	AYLDKSPQF	9	62	534.772322488521	1067.530092043842	2	535.2734985351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AYLDKSPQF_	ENSG00000067248|ENST00000251636|DHX29;ENST00000504778.5_1_5:54552318-54579000:-|nuORF;ENST00000513447.1_1_5:54569247-54572159:-|nuORF	32.81241826257853	0.4965981579233955	3				NaN	NaN	0	NaN	6922	4841	11763
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11766	34.843	NaN	1780.6	30	0	119.41	0.106			+	50556	YATSSILGFK	10	64	543.7947998046875	NaN	0	543.7947998046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YATSSILGFK_	REV__ENSG00000165030|ENST00000297689|NFIL3	54.776311868738084	0.27540594196716844	3				NaN	NaN	0	NaN	6923	4841	11763
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11767	34.845	NaN	3272.2	30	0	325.77	0.034	+			5821	AVIGAGVSGLI	11	59	478.7927584271015	955.570963921003	2	478.7912902832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVIGAGVSGLI_	ENSG00000094963|ENST00000209929|FMO2;ENST00000209929.9_1_1:171154426-171178089:+|nuORF;ENST00000462643.2_1_1:171154426-171162550:+|nuORF;ENST00000493513.1_1_1:171154462-171155083:+|nuORF;FMO2|p.Y103Ifs*10|1|0.41|ENSG00000094963|chr1:171193504-171193505|-/A|frameshift_variant	58.78195531508484	0.3343278462358323	3				NaN	NaN	0	NaN	6924	4841	11763
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11773	34.859	NaN	3763.8	30	0	382.08	0.214	+			42381	TAIRALETY	9	69	519.2855308823806	1036.5565088315611	2	519.2857666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAIRALETY_	ELL2|p.H478Afs*4|1|0.2|ENSG00000118985|chr5:95898334-95898335|-/T|frameshift_variant;ELL2|p.K468Nfs*8|1|0.32|ENSG00000118985|chr5:95898361-95898361|T/-|frameshift_variant;ENSG00000118985|ENST00000237853|ELL2;ENST00000506628.1_1_5:95242411-95297425:-|nuORF;nc|ENSG00000118985|O00472-2|ELL2	63.42647028704847	0.1850514934184437	3				NaN	NaN	0	NaN	6927	4844	11772
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11774	34.862	NaN	3577.1	30	0	433.54	0.106	+			37355	SLFEGSLSK	9	63	484.25875451029174	NaN	0	484.2590637207031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLFEGSLSK_	ENSG00000092140|ENST00000206595|G2E3;ENST00000468439.2_1_3:132106687-132107131:+|nuORF	51.19269402634007	0.19847346126499396	3				NaN	NaN	0	NaN	6928	4844	11772
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11775	34.864	NaN	2196.7	30	0	166.2	0.106			+	13456	GLIVSIVKQ	9	62	478.8109522033276	955.6073514734552	2	478.810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GLIVSIVKQ_	REV__ENSG00000179256|ENST00000316048|SMCO3	49.44154591367651	0.3095138337212152	3				NaN	NaN	0	NaN	6929	4844	11772
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11776	34.866	NaN	2539.1	30	0	653.96	0.106	+			13321	GKKIPAESV	9	59	464.776690239347	NaN	0	464.77618408203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GKKIPAESV_	TMTC3|p.T843A|1|0.04|ENSG00000139324|chr12:88195431-88195431|A/G|missense_variant	40.77816245573522	0.2702456086868081	3				NaN	NaN	0	NaN	6930	4844	11772
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11777	34.868	NaN	2026.6	30	0	168.18	0.034	+			9358	EISLQRVV	8	63	472.28159229730653	NaN	0	472.2823791503906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EISLQRVV_	ENSG00000178187|ENST00000519564|ZNF454;ZNF454|p.N204Mfs*52|1|0.31|ENSG00000178187|chr5:178965009-178965009|A/-|frameshift_variant	68.78682469695295	1.7418937515398478	3				NaN	NaN	0	NaN	6931	4844	11772
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11782	34.882	NaN	2782.9	30	0	167.71	0.214	+			279	AAPAHRGTPDT	11	70	547.2728638573755	1092.5311747815508	2	547.2725219726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAPAHRGTPDT_	ENSG00000224470|ENST00000427980|ATXN1L	47.95952297671804	0.44903247279694136	3				NaN	NaN	0	NaN	6933	4847	11781
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11783	34.886	NaN	2222.9	30	0	321.96	0.106	+			24226	LESIQLEL	8	56	472.76786050610264	NaN	0	472.7685546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LESIQLEL_	ENSG00000178021|ENST00000317802|TSPYL6	62.107414245175825	1.7418937515398478	3				NaN	NaN	0	NaN	6934	4847	11781
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11784	34.888	NaN	2770.9	30	0	377.46	0.106			+	26280	LSTRGSPEL	9	62	480.2611281237765	NaN	0	480.2613220214844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSTRGSPEL_	REV__ENSG00000146776|ENST00000419735|ATXN7L1;REV__ENST00000474433.5_1_7:105254161-105283525:-|nuORF;REV__nc|ENSG00000146776|Q9ULK2-3|ATXN7L1	74.25504064058377	0.09106938647426577	3				NaN	NaN	0	NaN	6935	4847	11781
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11785	34.89	NaN	572.46	30	0	74.357	0.035			+	33373	RHRVQLAQ	8	26	336.53387451171875	NaN	0	336.53387451171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RHRVQLAQ_	REV__nc|ENSG00000132000|Q6PEZ8-2|PODNL1;REV__nc|ENSG00000132000|Q6PEZ8-3|PODNL1;REV__nc|ENSG00000132000|Q6PEZ8|PODNL1	19.359975847455235	1.7418937515398478	3				NaN	NaN	0	NaN	6936	4847	11781
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11790	34.904	NaN	5240.5	30	0	1140.3	0.214			+	39846	STLLPLQR	8	60	464.2850058126477	926.5554586920954	2	464.2849426269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STLLPLQR_	REV__ENSG00000165271|ENST00000297990|NOL6;REV__nc|ENSG00000165271|Q9H6R4-2|NOL6;REV__nc|ENSG00000165271|Q9H6R4-4|NOL6;REV__NOL6|p.Q953Kfs*32|4|0.2|ENSG00000165271|chr9:33464084-33464084|G/-|frameshift_variant	65.80317337860623	0.44433089765398776	3				NaN	NaN	0	NaN	6938	4850	11789
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11791	34.907	NaN	2059.5	30	0	164.16	0.106	+			10615	EYMSDRGLAL	10	59	577.7789378035906	1153.543322673981	2	577.78076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EYMSDRGLAL_	ENSG00000197381|ENST00000348831|ADARB1;nc|ENSG00000197381|P78563-3|ADARB1;nc|ENSG00000197381|P78563-4|ADARB1;nc|ENSG00000197381|P78563-5|ADARB1;nc|ENSG00000197381|P78563-6|ADARB1;nc|ENSG00000197381|P78563|ADARB1	36.446750945000026	0.5818864909973037	3				NaN	NaN	0	NaN	6939	4850	11789
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11792	34.909	NaN	1823.8	30	0	287.42	0.036			+	37403	SLGGETKIGAW	11	63	559.7947590356426	1117.5749651380852	2	560.2960815429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLGGETKIGAW_	REV__ENSG00000104313|ENST00000340726|EYA1;REV__ENST00000496494.5_1_8:72111577-72234167:-|nuORF;REV__nc|ENSG00000104313|Q99502-2|EYA1	29.550750289552195	0.6798279264880025	3				NaN	NaN	0	NaN	6940	4850	11789
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11796	34.923	NaN	1091.8	30	0	372.51	0.214			+	18263	IPEAAPIRL	9	32	327.20139068194953	NaN	0	327.2017517089844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IPEAAPIRL_	REV__ENSG00000185920|ENST00000331920|PTCH1;REV__ENST00000375290.6_3_9:98215758-98232201:-|nuORF;REV__nc|ENSG00000185920|Q13635-2|PTCH1;REV__nc|ENSG00000185920|Q13635-3|PTCH1;REV__nc|ENSG00000185920|Q13635-4|PTCH1;REV__PTCH1|p.R1308Efs*64|1|0.24|ENSG00000185920|chr9:95447335-95447335|G/-|frameshift_variant;REV__PTCH1|p.S1203Afs*52|2|0.47|ENSG00000185920|chr9:95449267-95449267|G/-|frameshift_variant;REV__PTCH1|p.Y1316Tfs*56|3|0.29|ENSG00000185920|chr9:95447311-95447311|G/-|frameshift_variant	14.137123925751023	0.3891339986947948	3				NaN	NaN	0	NaN	6941	4853	11795
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11797	34.927	NaN	2806.4	30	0	1658.6	0.106				-1	 	0	41	379.2098821050165	756.405211276833	2	379.20916748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	6942	4853	11795
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11798	34.929	NaN	3895.2	30	0	413.93	0.106	+			17675	IEKNLQLLGA	10	73	549.8296961993384	1097.6448394654767	2	549.8295288085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IEKNLQLLGA_	ENSG00000124406|ENST00000381668|ATP8A1;nc|ENSG00000124406|Q9Y2Q0-2|ATP8A1;nc|ENSG00000124406|Q9Y2Q0-3|ATP8A1	104.0567914643314	0.06564926686336217	3				NaN	NaN	0	NaN	6943	4853	11795
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11799	34.931	NaN	1877.8	30	0	207.92	0.106	+			29168	NVIRDAVTY	9	67	525.7831907909591	1049.5518286487181	2	525.7831420898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NVIRDAVTY_	ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2	45.97224482568171	0.3502073465782774	3				NaN	NaN	0	NaN	6944	4853	11795
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11800	34.932	NaN	1630.3	30	0	126.37	0.035			+	31311	QILHMEPAC	9	61	521.2488865212077	NaN	0	521.2493286132812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QILHMEPAC_	REV__ENSG00000196218|ENST00000359596|RYR1;REV__ENSG00000198838|ENST00000634891|RYR3;REV__nc|ENSG00000196218|P21817-2|RYR1;REV__nc|ENSG00000196218|P21817-3|RYR1;REV__nc|ENSG00000198838|Q15413-2|RYR3;REV__nc|ENSG00000198838|Q15413-3|RYR3;REV__RYR1|p.D2713Tfs*33|1|0.11|ENSG00000196218|chr19:38504811-38504811|C/-|frameshift_variant;REV__RYR1|p.P3303Tfs*8|1|0.36|ENSG00000196218|chr19:38517571-38517572|-/C|frameshift_variant;REV__RYR1|p.R2435C|1|0.2|ENSG00000196218|chr19:38499996-38499996|C/T|missense_variant;REV__RYR3|p.E3943Rfs*18|1|0.12|ENSG00000198838|chr15:33837800-33837801|-/A|frameshift_variant;REV__RYR3|p.N4580Mfs*8|1|0.37|ENSG00000198838|chr15:33853618-33853618|A/-|frameshift_variant	47.91560031466742	0.22105767942158736	3				NaN	NaN	0	NaN	6945	4853	11795
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11804	34.946	NaN	7132.3	30	0	680.24	0.214	+			51152	YPAPVPLPY	9	77	508.77723245453416	1015.5399119758683	2	508.77655029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YPAPVPLPY_	ENSG00000165617|ENST00000395153|DACT1;nc|ENSG00000165617|Q9NYF0|DACT1	39.021493756699265	0.43173687394350213	3				NaN	NaN	0	NaN	6946	4856	11803
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11805	34.95	NaN	1942.6	30	0	273.66	0.106	+			4241	ATGDMSGLLK	10	58	496.75794785708155	991.5013427809631	2	496.7576904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATGDMSGLLK_	ENSG00000127837|ENST00000248450|AAMP;ENST00000475678.5_1_2:219131145-219134809:-|nuORF;ENST00000489767.5_1_2:219130391-219134818:-|nuORF	66.96192283764107	0.30252237217063654	3				NaN	NaN	0	NaN	6947	4856	11803
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11806	34.952	NaN	5197.8	30	0	382.65	0.106	+			45549	TYLEKAIKI	9	74	539.8294199869416	1077.6442870406831	2	539.82958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TYLEKAIKI_	ENSG00000187555|ENST00000344836|USP7;ENST00000565455.5_1_16:8987857-9023250:-|nuORF;nc|ENSG00000187555|Q93009-3|USP7;USP7|p.R1090H|1|0.23|ENSG00000187555|chr16:8894038-8894038|C/T|missense_variant	93.19546047674547	0.05585629608842056	3				NaN	NaN	0	NaN	6948	4856	11803
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11807	34.954	NaN	5192	30	0	1457.6	0.106	+			45550	TYLEKAIKI	9	48	360.22207900190404	1077.6444076059122	3	360.2220153808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TYLEKAIKI_	ENSG00000187555|ENST00000344836|USP7;ENST00000565455.5_1_16:8987857-9023250:-|nuORF;nc|ENSG00000187555|Q93009-3|USP7;USP7|p.R1090H|1|0.23|ENSG00000187555|chr16:8894038-8894038|C/T|missense_variant	47.91560031466742	0.327412564698279	3				NaN	NaN	0	NaN	6949	4856	11803
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11808	34.955	NaN	1359	30	0	211.04	0.106	+			8515	EATLLQKL	8	55	458.2788254682371	NaN	0	458.2786560058594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EATLLQKL_	CCDC40|p.I914Tfs*84|1|0.32|ENSG00000141519|chr17:80089792-80089793|-/C|frameshift_variant;CCDC40|p.K1058Nfs*21|1|0.06|ENSG00000141519|chr17:80097395-80097395|A/-|frameshift_variant;ENSG00000141519|ENST00000397545|CCDC40;ENST00000572253.5_1_17:78055330-78055681:+|nuORF;ENST00000574799.5_1_17:78022329-78073571:+|nuORF;nc|ENSG00000141519|Q4G0X9-2|CCDC40;nc|ENSG00000141519|Q4G0X9-3|CCDC40	34.172542307311794	1.7418937515398478	3				NaN	NaN	0	NaN	6950	4856	11803
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11809	34.957	NaN	1970.2	30	0	196.29	0.036			+	16090	HDEPLPSPAE	10	67	546.2540212801632	1090.4934896271263	2	546.7544555664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HDEPLPSPAE_	REV__ENST00000488383.5_1_6:30614935-30617552:+|nuORF	39.252832667884924	0.5560298534376815	3				NaN	NaN	0	NaN	6951	4856	11803
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11813	34.971	NaN	7172.2	30	0	675.48	0.214	+			12756	GELGNGNIKL	10	70	507.7821121123856	1013.5496712915713	2	507.7823181152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GELGNGNIKL_	ENSG00000132646|ENST00000379143|PCNA	106.68306549817024	0.05784995512091477	3				NaN	NaN	0	NaN	6952	4859	11812
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11814	34.975	NaN	4243.4	30	0	687.86	0.106	+			24319	LFHPSNVEM	9	63	537.2583161473468	1072.5020793614935	2	537.2581787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LFHPSNVEM_	ENSG00000151694|ENST00000310823|ADAM17	56.72105179125745	0.24094814563026265	3				NaN	NaN	0	NaN	6953	4859	11812
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11815	34.977	NaN	2927.8	30	0	426.82	0.106	+			5723	AVFPAISTK	9	55	467.2734614720693	932.5323700109386	2	467.2733154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVFPAISTK_	ENSG00000162896|ENST00000356495|PIGR;PIGR|p.W404Vfs*3|1|0.53|ENSG00000162896|chr1:206935654-206935655|-/C|frameshift_variant	47.657333605630114	0.33044192980041115	3				NaN	NaN	0	NaN	6954	4859	11812
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11816	34.979	NaN	2021.1	30	0	133.8	0.106	+			8011	DTLSTMTQF	9	65	522.239573780889	1042.464594628578	2	522.2403564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DTLSTMTQF_	ENST00000521575.1_1_17:4802781-4802940:+|nuORF	76.7741389293348	0.11149722112137898	3				NaN	NaN	0	NaN	6955	4859	11812
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11817	34.98	NaN	2206.2	30	0	256.86	0.106	+			40523	STYYGSFVTR	10	61	590.7859365203662	1179.5573201075324	2	590.7861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STYYGSFVTR_	EIF3H|p.S183Pfs*5|1|0.05|ENSG00000147677|chr8:116657225-116657225|A/-|frameshift_variant;ENSG00000147677|ENST00000521861|EIF3H;ENST00000517974.1_1_8:117671049-117768052:-|nuORF;ENST00000518034.5_1_8:117671049-117768048:-|nuORF	58.2462437865262	0.38179041844353556	3				NaN	NaN	0	NaN	6956	4859	11812
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11818	34.982	NaN	2020.3	30	0	243.29	0.106	+			8652	EDLVARVF	8	56	474.7610933045334	947.5076336758668	2	474.7604064941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EDLVARVF_	ENSG00000060656|ENST00000373779|PTPRU;ENST00000465525.6_1_1:29647190-29652170:+|nuORF;nc|ENSG00000060656|Q92729-3|PTPRU;nc|ENSG00000060656|Q92729-4|PTPRU;nc|ENSG00000060656|Q92729|PTPRU;TRNAU1AP-PTPRU|1|fusion;TRNAU1AP-PTPRU|2|fusion;TRNAU1AP-PTPRU|3|fusion	50.0245360154114	0.5941082100236891	3				NaN	NaN	0	NaN	6957	4859	11812
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11819	34.984	NaN	1797.1	30	0	316.19	0.035	+			16903	HPISSEELL	9	62	512.7669177114666	1023.5192824897332	2	512.769287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HPISSEELL_	ENSG00000134954|ENST00000392668|ETS1;ETS1|p.N203Rfs*56|1|0.07|ENSG00000134954|chr11:128484945-128484946|-/ATTTCTTC|frameshift_variant;nc|ENSG00000134954|P14921-2|ETS1;nc|ENSG00000134954|P14921-5|ETS1;nc|ENSG00000134954|P14921|ETS1	30.503639358989545	0.5181749237905803	3				NaN	NaN	0	NaN	6958	4859	11812
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11826	35.002	NaN	4304.5	30	0	624.58	0.214	+			11173	FGQLGREL	8	57	460.25346798356594	918.4923830339319	2	460.2530822753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FGQLGREL_	ENSG00000277150|ENST00000622749|F8A3	54.776311868738084	0.5534952410049249	3				NaN	NaN	0	NaN	6962	4862	11825
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11827	35.006	NaN	1886.8	30	0	149.51	0.106	+			11250	FILGSHLTY	9	70	525.7831907909591	1049.5518286487181	2	526.2852783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FILGSHLTY_	ENSG00000180479|ENST00000451802|ZNF571	55.50420428727701	0.2510918378945873	3				NaN	NaN	0	NaN	6963	4862	11825
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11828	35.007	NaN	1026.3	30	0	76.104	0.034	+			41156	SVKFNKGY	8	53	471.75555419921875	NaN	0	471.75555419921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVKFNKGY_	ENSG00000178761|ENST00000357635|FAM219B;ENST00000564857.1_1_15:75197493-75199009:-|nuORF;ENST00000566894.1_1_15:75197493-75197640:-|nuORF;nc|ENSG00000178761|Q5XKK7-3|FAM219B	45.9519527083369	1.7418937515398478	3				NaN	NaN	0	NaN	6964	4862	11825
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11833	35.022	NaN	2878.2	30	0	417.62	0.214	+			13215	GIFVSPKSV	9	60	467.2734614720693	932.5323700109386	2	467.77227783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GIFVSPKSV_	ENSG00000021488|ENST00000023064|SLC7A9;SLC7A9|p.N203Tfs*61|1|0.2|ENSG00000021488|chr19:32862214-32862214|T/-|frameshift_variant	42.396135135203025	0.392153681582562	3				NaN	NaN	0	NaN	6966	4865	11832
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11834	35.025	NaN	5011.1	30	0	777.41	0.106	+			45958	VASPSPSGSVL	11	64	500.7693055423585	999.524058151517	2	500.76861572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VASPSPSGSVL_	ENSG00000160194|ENST00000354250|NDUFV3	69.6276240434122	0.23884409287757344	3				NaN	NaN	0	NaN	6967	4865	11832
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11835	35.027	NaN	2565.4	30	0	324.44	0.106	+			46349	VEKPSPLTL	9	59	492.2932551572434	982.5719573812868	2	492.2920227050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VEKPSPLTL_	ENSG00000129083|ENST00000439561|COPB1	63.53385203322761	0.18415635464017938	3				NaN	NaN	0	NaN	6968	4865	11832
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11836	35.029	NaN	2099.8	30	0	309.23	0.106	+			33654	RMYNVRIM	8	62	557.7794823311424	1113.5444117290847	2	558.27978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Oxidation (M)	_RM(Oxidation (M))YNVRIM(Oxidation (M))_	ENSG00000106327|ENST00000223051|TFR2;ENST00000461176.1_1_7:100224226-100225153:-|nuORF;ENST00000465294.5_1_7:100218482-100225153:-|nuORF;ENST00000476304.5_1_7:100218482-100231271:-|nuORF;nc|ENSG00000106327|Q9UP52-2|TFR2;nc|ENSG00000106327|Q9UP52-3|TFR2	52.29916861842294	0.578018602984656	3				NaN	NaN	0	NaN	6969	4865	11832
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11837	35.031	NaN	1113.8	30	0	42.955	0.106			+	-1	EADMKAKLL	9	59	517.7816162109375	NaN	0	517.7816162109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_EADM(Oxidation (M))KAKLL_	REV__ENSG00000104805|ENST00000405315|NUCB1	31.529811441608018	0.3183796599642538	3				NaN	NaN	0	NaN	6970	4865	11832
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11838	35.033	NaN	1184.1	30	0	427.82	0.106	+			24155	LELQKGCL	8	40	452.2522898609519	902.4900267887039	2	452.25164794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LELQKGCL_	ENST00000460006.5_1_20:5171123-5171372:+|nuORF	29.14955571784316	0.7342621283720113	3				NaN	NaN	0	NaN	6971	4865	11832
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11839	35.034	NaN	1293	30	0	85.313	0.036			+	10533	EWKTLRGIG	9	57	530.2999267578125	NaN	0	530.2999267578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EWKTLRGIG_	REV__ENST00000479896.1_1_10:129869671-129881167:+|nuORF	30.503639358989545	0.3235605894931338	3				NaN	NaN	0	NaN	6972	4865	11832
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11844	35.049	NaN	21873	30	0	1253.1	0.214	+			26904	LYADVGGKQF	10	79	549.2852395866148	1096.5559262400295	2	549.2854614257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LYADVGGKQF_	ENSG00000180879|ENST00000370086|SSR4;ENST00000460616.5_1_X:153061851-153063636:+|nuORF;ENST00000485612.5_1_X:153061851-153063885:+|nuORF	138.06239232086	0.011270695112186733	3				NaN	NaN	0	NaN	6974	4868	11843
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11845	35.052	NaN	3138.9	30	0	189.65	0.106	+			11504	FPDKPITQY	9	73	554.7874069501805	1107.560260967161	2	554.787353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FPDKPITQY_	ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656-2|DDOST;nc|ENSG00000244038|P39656-3|DDOST;nc|ENSG00000244038|P39656|DDOST	56.43379154798735	0.2433427591689151	3				NaN	NaN	0	NaN	6975	4868	11843
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11846	35.054	NaN	2427.6	30	0	193.56	0.106	+			922	AEIEQYRL	8	57	511.26916943753383	1020.5237859418677	2	511.2691650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEIEQYRL_	ENSG00000136888|ENST00000374050|ATP6V1G1	69.6276240434122	0.4100012001731381	3				NaN	NaN	0	NaN	6976	4868	11843
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11847	35.056	NaN	3329.7	30	0	443.47	0.106	+			8483	EASKYIMQY	9	70	566.7710549440073	1131.5275569548146	2	566.7718505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EASKYIMQY_	ENSG00000176658|ENST00000318217|MYO1D	108.08749611321984	0.03094949498378333	3				NaN	NaN	0	NaN	6977	4868	11843
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11848	35.058	NaN	2304.1	30	0	332.23	0.106	+			12721	GEKTIIITC	9	64	489.2707777734694	976.5270026137388	2	489.26983642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GEKTIIITC_	ENSG00000174231|ENST00000304992|PRPF8	65.46538089061403	0.16805504838372562	3				NaN	NaN	0	NaN	6978	4868	11843
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11849	35.06	NaN	1860.1	30	0	200.44	0.106			+	24159	LELRLNAV	8	50	464.2850058126477	926.5554586920954	2	464.285400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LELRLNAV_	REV__ENSG00000118898|ENST00000345988|PPL;REV__PPL|p.K1530Gfs*18|1|0.27|ENSG00000118898|chr16:4884058-4884068|GCTCGCGCTTG/-|frameshift_variant	49.44154591367651	0.597725784090933	3				NaN	NaN	0	NaN	6979	4868	11843
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11850	35.062	NaN	1979.9	30	0	185.92	0.035			+	26051	LSLNFHLAL	9	57	514.3004249204976	1026.586296907795	2	514.3004760742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSLNFHLAL_	REV__HERVH-int_dup3527|chrX:4542813-4545870:-|8.094520876636611|0.0139942278604804|9.18|476.0|3|1|sense	31.529811441608018	0.5085848003137583	3				NaN	NaN	0	NaN	6980	4868	11843
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11855	35.076	NaN	1585.2	30	0	289.58	0.142			+	15650	GVLPPAKKT	9	46	455.78976835679345	909.5649837803869	2	455.7893371582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVLPPAKKT_	REV__ENSG00000156398|ENST00000369893|SFXN2;REV__SFXN2|p.P265Sfs*27|1|0.05|ENSG00000156398|chr10:102733574-102733575|-/T|frameshift_variant	32.81241826257853	0.4965981579233955	3				NaN	NaN	0	NaN	6982	4871	11854
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11859	35.092	NaN	2329.7	30	0	449.54	0.143			+	493	ACAIYAWLP	9	62	504.2528061526331	1006.4910593720663	2	504.2521057128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ACAIYAWLP_	REV__CEPT1|p.C185Lfs*28|1|0.43|ENSG00000134255|chr1:111161213-111161214|-/T|frameshift_variant;REV__CEPT1|p.C185Vfs*26|1|0.36|ENSG00000134255|chr1:111161214-111161214|T/-|frameshift_variant;REV__ENSG00000134255|ENST00000357172|CEPT1;REV__ENST00000480324.5_1_1:111690336-111702181:+|nuORF	39.021493756699265	0.43173687394350213	3				NaN	NaN	0	NaN	6983	4874	11858
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11866	35.11	NaN	8758.8	30	0	1108	0.214	+			28283	NEASVLHNL	9	63	498.75944758824636	995.5043422432927	2	498.758544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NEASVLHNL_	ENSG00000078814|ENST00000262873|MYH7B;ENSG00000100345|ENST00000216181|MYH9;ENSG00000105357|ENST00000642316|MYH14;ENSG00000133026|ENST00000360416|MYH10;ENSG00000133392|ENST00000300036|MYH11;MYH10|p.A411Pfs*11|1|0.15|ENSG00000133026|chr17:8546562-8546562|T/-|frameshift_variant;MYH14|p.G549Wfs*8|1|0.23|ENSG00000105357|chr19:50250519-50250520|-/C|frameshift_variant;MYH14|p.L1950Sfs*14|1|0.34|ENSG00000105357|chr19:50309646-50309646|C/-|frameshift_variant;MYH14|p.M997*|1|0.19|ENSG00000105357|chr19:50271483-50271483|A/-|frameshift_variant;MYH14|p.P548Lfs*25|2|0.32|ENSG00000105357|chr19:50250520-50250520|C/-|frameshift_variant;MYH14|p.R929Gfs*44|1|0.38|ENSG00000105357|chr19:50268237-50268237|G/-|frameshift_variant;MYH9|p.C91Y|1|0.25|ENSG00000100345|chr22:36348965-36348965|C/T|missense_variant;MYH9|p.I784*|1|0.07|ENSG00000100345|chr22:36304036-36304036|G/-|frameshift_variant;nc|ENSG00000078814|A7E2Y1-2|MYH7B;nc|ENSG00000078814|A7E2Y1|MYH7B;nc|ENSG00000105357|Q7Z406-4|MYH14;nc|ENSG00000105357|Q7Z406-5|MYH14;nc|ENSG00000105357|Q7Z406-6|MYH14;nc|ENSG00000105357|Q7Z406|MYH14;nc|ENSG00000133026|P35580-2|MYH10;nc|ENSG00000133026|P35580-3|MYH10;nc|ENSG00000133026|P35580-5|MYH10;nc|ENSG00000133026|P35580|MYH10;nc|ENSG00000133392|P35749-2|MYH11;nc|ENSG00000133392|P35749-3|MYH11;nc|ENSG00000133392|P35749-4|MYH11	136.26810882979174	0.012230845423532208	3				NaN	NaN	0	NaN	6987	4877	11865
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11867	35.114	NaN	2639.7	30	0	503.24	0.106			+	26671	LVGDKFILN	9	68	509.80196108895933	NaN	0	509.8021240234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LVGDKFILN_	REV__ENSG00000176853|ENST00000334705|FAM91A1;REV__ENST00000518333.1_1_8:124821116-124824941:+|nuORF	47.95952297671804	0.22075498469600283	3				NaN	NaN	0	NaN	6988	4877	11865
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11868	35.116	NaN	1992	30	0	218.48	0.106	+			4602	ATLISRGLE	9	64	480.2800526477477	958.5455523622954	2	480.2792053222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATLISRGLE_	FANCG|p.A516T|1|0.16|ENSG00000221829|chr9:35075017-35075017|C/T|missense_variant	60.11826168202944	0.21262886028301267	3				NaN	NaN	0	NaN	6989	4877	11865
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11869	35.117	NaN	1497.1	30	0	234.29	0.106	+			833	AEGFVRAL	8	44	431.74262038709463	861.4706878409893	2	431.7419738769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEGFVRAL_	ENSG00000177606|ENST00000371222|JUN;JUN|p.R257Kfs*53|1|0.31|ENSG00000177606|chr1:58782301-58782302|-/T|frameshift_variant	45.9519527083369	0.6193794311207887	3				NaN	NaN	0	NaN	6990	4877	11865
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11870	35.119	NaN	1443.4	30	0	208.98	0.106	+			25751	LSAASLTLV	9	52	437.7659837941296	873.5174146550593	2	437.76531982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSAASLTLV_	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42|TTN;TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant;TTN|p.V27442Cfs*4|1|0.05|ENSG00000155657|chr2:178558107-178558108|-/A|frameshift_variant	47.91560031466742	0.327412564698279	3				NaN	NaN	0	NaN	6991	4877	11865
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11871	35.121	NaN	1598.7	30	0	196.12	0.035	+			41137	SVITTPSVGLA	11	52	522.8000410104781	1043.5855290877562	2	522.80078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVITTPSVGLA_	ENST00000527357.5_1_11:803787-804093:-|nuORF	32.81241826257853	0.645615689454792	3				NaN	NaN	0	NaN	6992	4877	11865
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11876	35.135	NaN	2916	30	0	288.64	0.214	+			712	AEASMISKL	9	56	475.25516502855066	948.4957771239013	2	475.2545471191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEASMISKL_	ENSG00000055130|ENST00000325222|CUL1	70.8162118820467	0.13725933411854815	3				NaN	NaN	0	NaN	6994	4880	11875
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11877	35.139	NaN	3754.5	30	0	760.44	0.106	+			4643	ATLPPITVTSK	11	60	564.337366929102	1126.660180925004	2	564.3372802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATLPPITVTSK_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	33.921630207806714	0.6339809607503234	3				NaN	NaN	0	NaN	6995	4880	11875
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11878	35.141	NaN	3452.8	30	0	325.9	0.106	+			2516	APVGGHILSY	10	66	507.27380893734505	NaN	0	507.2740173339844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_APVGGHILSY_	ENSG00000197879|ENST00000648651|MYO1C;nc|ENSG00000197879|O00159-2|MYO1C;nc|ENSG00000197879|O00159-3|MYO1C	63.30626980617807	0.2072786894693966	3				NaN	NaN	0	NaN	6996	4880	11875
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11879	35.143	NaN	1900.6	30	0	104.68	0.106			+	-1	PNNPFTRESM	10	75	604.7700891800422	1207.5256254268843	2	604.76904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_PNNPFTRESM(Oxidation (M))_	REV__DST|p.K5076Nfs*24|1|0.31|ENSG00000151914|chr6:56472218-56472218|T/-|frameshift_variant;REV__DST|p.L1539Ffs*11|1|0.39|ENSG00000151914|chr6:56611525-56611526|-/A|frameshift_variant;REV__DST|p.N1220Tfs*9|1|0.23|ENSG00000151914|chr6:56630354-56630354|T/-|frameshift_variant;REV__DST|p.T4428Nfs*23|1|0.12|ENSG00000151914|chr6:56497896-56497897|-/T|frameshift_variant;REV__ENSG00000151914|ENST00000680361|DST;REV__ENST00000521104.1_1_6:56504020-56557947:-|nuORF;REV__ENST00000523967.5_1_6:56504020-56716372:-|nuORF;REV__nc|ENSG00000151914|Q03001-13|DST;REV__nc|ENSG00000151914|Q03001-14|DST;REV__nc|ENSG00000151914|Q03001|DST	35.15202426646627	0.5927656479315102	3				NaN	NaN	0	NaN	6997	4880	11875
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11880	35.144	NaN	2511.5	30	0	391.75	0.036				-1	KKCHCHGY	8	70	545.237229282013	1088.459905630826	2	545.237548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C)	_KKC(Carbamidomethyl (C))HC(Carbamidomethyl (C))HGY_	sp|P16782|RIR1_HCMVARibonucleoside-diphosphatereductaselargesubunit-likeproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=RIR1PE=3SV=1;sp|Q6SW87|RIR1_HCMVMRibonucleoside-diphosphatereductaselargesubunit-likeproteinOS=Humancytomegalovirus(strainMerlin)OX=295027GN=RIR1PE=3SV=1	44.53106598305862	0.628196326904373	3				NaN	NaN	0	NaN	6998	4880	11875
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11884	35.158	NaN	11110	30	0	2679.8	0.214				-1	 	0	62	487.2823884689212	972.5502240046425	2	487.28173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	6999	4883	11883
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11885	35.162	NaN	9343.4	30	0	1736.8	0.106				-1	 	0	75	491.2485624150545	980.482571896909	2	491.2479553222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7000	4883	11883
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11886	35.164	NaN	10623	30	0	1557.7	0.106			+	42590	TASVLIVKQ	9	63	479.80062931657125	957.5867056999425	2	479.8000793457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TASVLIVKQ_	REV__ENSG00000186886|ENST00000641440|OR5D3P	96.19043198914106	0.047412499214244314	3				NaN	NaN	0	NaN	7001	4883	11883
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11887	35.166	NaN	3075.7	30	0	501.25	0.106			+	18512	ISKEEKIT	8	68	474.2748543373184	946.5351557414368	2	474.27410888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ISKEEKIT_	REV__ENSG00000100599|ENST00000216487|RIN3;REV__ENST00000418924.6_1_14:93042630-93154594:+|nuORF;REV__ENST00000556385.5_1_14:93022207-93081825:+|nuORF;REV__nc|ENSG00000100599|Q8TB24-4|RIN3;REV__RIN3|p.V790Cfs*21|1|0.4|ENSG00000100599|chr14:92676507-92676507|G/-|frameshift_variant	39.252832667884924	0.6609488554722044	3				NaN	NaN	0	NaN	7002	4883	11883
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11888	35.167	NaN	1744.2	30	0	109.56	0.106				-1	HPVLCGRW	8	61	512.7614565723358	1023.5083602114715	2	512.7615356445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_HPVLC(Carbamidomethyl (C))GRW_	ENST00000511810.5_1_5:254575-256465:+|nuORF	49.21078951299608	0.5991576752473486	3				NaN	NaN	0	NaN	7003	4883	11883
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11889	35.169	NaN	2009.1	30	0	279.72	0.035	+			3063	ASFNDTFVH	9	61	519.2380678948615	1036.461582856523	2	519.2383422851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASFNDTFVH_	ENSG00000164587|ENST00000407193|RPS14;ENST00000519690.1_1_5:149827146-149827347:-|nuORF	39.252832667884924	0.4290233611298554	3				NaN	NaN	0	NaN	7004	4883	11883
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11895	35.184	NaN	2301.4	30	0	177.2	0.146	+			25977	LSITSKVQELQ	11	77	623.3565427086155	1244.698532484031	2	623.3558349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSITSKVQELQ_	ENSG00000126777|ENST00000395314|KTN1;KTN1|p.A1102Gfs*15|2|0.3|ENSG00000126777|chr14:55670756-55670757|-/A|frameshift_variant;KTN1|p.H994Sfs*2|1|0.35|ENSG00000126777|chr14:55659677-55659678|-/C|frameshift_variant;KTN1|p.K1078Nfs*12|1|0.3|ENSG00000126777|chr14:55667292-55667292|A/-|frameshift_variant;KTN1|p.K1101Rfs*18|1|0.4|ENSG00000126777|chr14:55670757-55670757|A/-|frameshift_variant;KTN1|p.P993Lfs*6|1|0.36|ENSG00000126777|chr14:55659678-55659678|C/-|frameshift_variant;nc|ENSG00000126777|Q86UP2-2|KTN1;nc|ENSG00000126777|Q86UP2-3|KTN1;nc|ENSG00000126777|Q86UP2-4|KTN1	61.691277971877994	0.30835813808799384	3				NaN	NaN	0	NaN	7007	4886	11894
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11900	35.2	NaN	3277.9	30	0	331.18	0.214	+			28162	NAMNMQETY	9	66	551.2209605602756	1100.427368187351	2	551.221435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAMNMQETY_	ENSG00000114520|ENST00000251775|SNX4;ENST00000473417.5_1_3:125188296-125239016:-|nuORF	90.60085204095205	0.06317133949006545	3				NaN	NaN	0	NaN	7009	4889	11899
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11901	35.204	NaN	2574	30	0	611.03	0.106			+	31848	QPTHPLNTF	9	66	527.7697225997734	1053.5248922663468	2	527.7693481445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QPTHPLNTF_	REV__DHX15|p.R126Q|1|0.04|ENSG00000109606|chr4:24576373-24576373|C/T|missense_variant	35.15202426646627	0.4747332964206883	3				NaN	NaN	0	NaN	7010	4889	11899
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11902	35.206	NaN	1657.9	30	0	151.5	0.106	+			42255	TAARAWAL	8	56	430.2431187375319	858.4716845418639	2	430.2423400878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TAARAWAL_	ENSG00000244038|ENST00000602624|DDOST;ENST00000477229.1_1_1:20987242-20987843:-|nuORF;nc|ENSG00000244038|P39656-2|DDOST;nc|ENSG00000244038|P39656-3|DDOST;nc|ENSG00000244038|P39656|DDOST	45.9519527083369	0.6193794311207887	3				NaN	NaN	0	NaN	7011	4889	11899
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11903	35.207	NaN	2390.1	30	0	189.25	0.035			+	45450	TWFSKSPF	8	61	500.2505190272152	998.4864851212304	2	500.7579650878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TWFSKSPF_	REV__CFHR2|p.S61F|1|0.15|ENSG00000080910|chr1:196949578-196949578|C/T|missense_variant	35.61828744233558	0.6843154725607303	3				NaN	NaN	0	NaN	7012	4889	11899
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11908	35.222	NaN	3836.9	30	0	771.93	0.214	+			23718	LAVEGGQSL	9	53	437.23763191354305	872.4607108938861	2	437.23724365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LAVEGGQSL_	ENSG00000104691|ENST00000265616|UBXN8;nc|ENSG00000104691|O00124-2|UBXN8;nc|ENSG00000104691|O00124-3|UBXN8;nc|ENSG00000104691|O00124|UBXN8	69.6276240434122	0.14239879520340665	3				NaN	NaN	0	NaN	7014	4892	11907
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11909	35.225	NaN	3025.7	30	0	412.71	0.106	+			50618	YEAELRTTL	9	70	548.2881645235099	1094.5617761138196	2	548.28857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YEAELRTTL_	ENSG00000232629|ENST00000437316|HLA-DQB2;nc|ENSG00000232629|P05538-2|HLA-DQB2;nc|ENSG00000232629|P05538|HLA-DQB2	79.48907831485694	0.09975780661107167	3				NaN	NaN	0	NaN	7015	4892	11907
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11910	35.227	NaN	2818	30	0	666.59	0.106	+			29156	NVIHNLATY	9	64	522.7776119258973	1043.5406709185945	2	522.7776489257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NVIHNLATY_	ENSG00000123353|ENST00000243045|ORMDL2	74.25504064058377	0.12238981753128622	3				NaN	NaN	0	NaN	7016	4892	11907
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11911	35.229	NaN	1636.4	30	0	196.72	0.106	+			7320	DASSGRCTYR	10	67	558.2489865582517	NaN	0	558.2483520507812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DASSGRCTYR_	ENSG00000267221|ENST00000587304|C17orf113	29.170058357718403	0.40439580130713204	3				NaN	NaN	0	NaN	7017	4892	11907
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11912	35.231	NaN	2209.8	30	0	223.63	0.106			+	-1	TLTDVRLPM	9	63	531.2868981358864	1060.5592433385727	2	531.2867431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_TLTDVRLPM(Oxidation (M))_	REV__ENSG00000248483|ENST00000606183|POU5F2;REV__POU5F2|p.K186Sfs*3|2|0.25|ENSG00000248483|chr5:93741007-93741007|T/-|frameshift_variant	54.776311868738084	0.25715957988447635	3				NaN	NaN	0	NaN	7018	4892	11907
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11913	35.233	NaN	793.65	30	0	172.2	0.106	+			26112	LSPALHAL	8	34	411.2483944449487	820.4822359566974	2	411.2478942871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSPALHAL_	ENST00000359142.7_1_12:90010586-90010649:-|nuORF	21.70233525837049	0.7917639344264583	3				NaN	NaN	0	NaN	7019	4892	11907
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11914	35.234	NaN	1067.8	30	0	83.823	0.038			+	-1	FHVYSYKSK	9	57	600.8069494297731	1199.5993459263461	2	600.8064575195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))FHVYSYKSK_	REV__nc|ENSG00000151876|Q9UKT5-2|FBXO4	35.61828744233558	0.47037581924408073	3				NaN	NaN	0	NaN	7020	4892	11907
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11918	35.248	NaN	3576.1	30	0	296.57	0.214	+			4536	ATLAAVLQR	9	55	471.79073897809224	941.5669250229845	2	471.7902526855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATLAAVLQR_	ENSG00000159399|ENST00000290573|HK2	118.74307786436346	0.02196067127630568	3				NaN	NaN	0	NaN	7021	4895	11917
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11919	35.252	NaN	1865.6	30	0	565.56	0.106			+	28110	NAGVMEDKE	9	55	496.7217427223354	991.4289325114709	2	496.7212829589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NAGVMEDKE_	REV__ENSG00000178996|ENST00000381410|SNX18;REV__nc|ENSG00000178996|Q96RF0-3|SNX18;REV__nc|ENSG00000178996|Q96RF0|SNX18;REV__SNX18|p.A416Pfs*42|2|0.34|ENSG00000178996|chr5:54519192-54519192|C/-|frameshift_variant;REV__SNX18|p.A416Rfs*5|2|0.46|ENSG00000178996|chr5:54519191-54519192|-/C|frameshift_variant;REV__SNX18|p.K396N|1|0.27|ENSG00000178996|chr5:54519140-54519140|G/T|missense_variant	44.377184641726394	0.36891676396732553	3				NaN	NaN	0	NaN	7022	4895	11917
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11920	35.254	NaN	3185.3	30	0	283.6	0.106			+	9019	EGAVIVDGIKL	11	72	557.3299653506355	1112.6453777680708	2	557.3303833007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EGAVIVDGIKL_	REV__tr|U7T0U8|U7T0U8_FUSNUTranslationinitiationfactorIF-2OS=FusobacteriumnucleatumCTI-5OX=1316586GN=infBPE=3SV=1	89.02883481214508	0.10275031849113642	3				NaN	NaN	0	NaN	7023	4895	11917
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11921	35.256	NaN	2257.7	30	0	421.97	0.106			+	1325	AETFVIFAL	9	56	505.77993014227235	1009.5453073513447	2	505.7797546386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AETFVIFAL_	REV__ENSG00000174358|ENST00000304460|SLC6A19	38.80614096846853	0.43426287593479557	3				NaN	NaN	0	NaN	7024	4895	11917
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11922	35.258	NaN	5699.7	30	0	2351.2	0.106			+	-1	CWCGSTWWR	9	57	414.50444362867813	1240.4915014862345	3	414.8377990722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_CWC(Carbamidomethyl (C))GSTWWR_	REV__KIF18B|p.T18Pfs*35|1|0.6|ENSG00000186185|chr17:44936294-44936294|G/-|frameshift_variant	25.57405402267927	0.5642445186134241	3				NaN	NaN	0	NaN	7025	4895	11917
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11923	35.259	NaN	2063.1	30	0	802.94	0.106			+	7061	CTSDYDKPEPS	11	51	621.2520139465327	1240.4894749598652	2	621.2520141601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_CTSDYDKPEPS_	REV__ENSG00000111911|ENST00000229633|HINT3	29.244998729987998	0.6830350109967848	3				NaN	NaN	0	NaN	7026	4895	11917
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11924	35.261	NaN	1000.7	30	0	93.385	0.037	+			47216	VMEENGVNRI	10	56	580.7900390625	NaN	0	580.7900390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VMEENGVNRI_	tr|U7SVV7|U7SVV7_FUSNUOxygen-independentcoproporphyrinogenIIIoxidaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01354PE=4SV=1	29.170058357718403	0.40439580130713204	3				NaN	NaN	0	NaN	7027	4895	11917
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11928	35.275	NaN	3504.8	30	0	330.76	0.214			+	-1	TDKCYQVL	8	64	513.7505309175298	1025.4865089018595	2	513.7510986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_TDKC(Carbamidomethyl (C))YQVL_	REV__ENSG00000114487|ENST00000232603|MORC1;REV__MORC1|p.K745Rfs*6|1|0.31|ENSG00000114487|chr3:108986903-108986903|T/-|frameshift_variant;REV__MORC1|p.N978Kfs*2|2|0.38|ENSG00000114487|chr3:108958986-108958987|-/T|frameshift_variant;REV__nc|ENSG00000114487|Q86VD1-2|MORC1	37.15910966729921	0.6739408393984688	3				NaN	NaN	0	NaN	7028	4898	11927
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11929	35.279	NaN	3054.5	30	0	248.35	0.106	+			41095	SVINPGAIYR	10	72	545.3064146715598	1088.5982764099194	2	545.3072509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVINPGAIYR_	ENSG00000115232|ENST00000397033|ITGA4;ENST00000465522.5_1_2:182322141-182350724:+|nuORF;ENST00000476089.1_1_2:182321937-182323202:+|nuORF;ENST00000484404.1_1_2:182322441-182339919:+|nuORF;ITGA4|p.T615Nfs*11|1|0.22|ENSG00000115232|chr2:181509798-181509799|-/A|frameshift_variant;nc|ENSG00000115232|P13612-2|ITGA4	72.87924865735499	0.25379688738724415	3				NaN	NaN	0	NaN	7029	4898	11927
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11930	35.281	NaN	2857.5	30	0	426.03	0.106	+			48338	VTGGIFSVTK	10	65	504.79052096549594	1007.5664889977919	2	504.79046630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTGGIFSVTK_	ENSG00000151135|ENST00000280756|TMEM263	46.45678178249821	0.4896490706773647	3				NaN	NaN	0	NaN	7030	4898	11927
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11931	35.282	NaN	2479.6	30	0	256.55	0.035	+			36331	SESSIDRLM	9	62	519.2506791931174	1036.4868054530348	2	519.2507934570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SESSIDRLM_	ENSG00000181789|ENST00000314797|COPG1	41.42661286455405	0.403525789677298	3				NaN	NaN	0	NaN	7031	4898	11927
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11937	35.298	NaN	7027.3	30	0	657.95	0.214			+	10234	ETIGILISH	9	67	491.78256314118494	981.5505733491699	2	491.7818603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ETIGILISH_	REV__ENSG00000185133|ENST00000331075|INPP5J;REV__ENST00000461241.1_1_22:31523357-31529733:+|nuORF;REV__nc|ENSG00000185133|Q15735-2|INPP5J;REV__nc|ENSG00000185133|Q15735-3|INPP5J	45.9519527083369	0.35044536499095585	3				NaN	NaN	0	NaN	7034	4901	11936
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11938	35.302	NaN	1798.1	30	0	233.66	0.106				-1	 	0	44	379.20993197608743	756.4053110189749	2	379.20916748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7035	4901	11936
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11939	35.304	NaN	1571	30	0	181.17	0.106	+			29169	NVIRDAVTY	9	70	525.7825213828231	1049.5504898324461	2	525.7830810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NVIRDAVTY_	ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2	54.722347961057174	0.257609425301511	3				NaN	NaN	0	NaN	7036	4901	11936
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11940	35.306	NaN	1017	30	0	88.237	0.038	+			21968	KSDLWSLGITA	11	54	595.8265991210938	NaN	0	595.8265991210938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KSDLWSLGITA_	ENSG00000154310|ENST00000436636|TNIK;nc|ENSG00000154310|Q9UKE5-2|TNIK;nc|ENSG00000154310|Q9UKE5-3|TNIK;nc|ENSG00000154310|Q9UKE5-4|TNIK;nc|ENSG00000154310|Q9UKE5-5|TNIK;nc|ENSG00000154310|Q9UKE5-6|TNIK;nc|ENSG00000154310|Q9UKE5-7|TNIK;nc|ENSG00000154310|Q9UKE5-8|TNIK;TNIK|p.E1253Kfs*13|1|0.04|ENSG00000154310|chr3:171066678-171066678|C/-|frameshift_variant;TNIK|p.F1336Lfs*15|1|0.15|ENSG00000154310|chr3:171063956-171063956|A/-|frameshift_variant;TNIK|p.K261Nfs*11|1|0.25|ENSG00000154310|chr3:171167261-171167261|T/-|frameshift_variant;TNIK|p.S560Ifs*2|1|0.05|ENSG00000154310|chr3:171128809-171128810|-/T|frameshift_variant;TNIK|p.V1263Cfs*3|1|0.42|ENSG00000154310|chr3:171066648-171066648|C/-|frameshift_variant	29.170058357718403	0.43541742044178583	3				NaN	NaN	0	NaN	7037	4901	11936
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11946	35.32	NaN	1396.4	30	0	224.09	0.214			+	26698	LVHVDYGL	8	49	458.2506833266227	914.4868137200455	2	458.2508544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LVHVDYGL_	REV__ENSG00000106144|ENST00000310447|CASP2;REV__ENST00000472067.1_1_7:142991698-142998016:+|nuORF;REV__ENST00000493642.5_1_7:142986735-143000877:+|nuORF;REV__nc|ENSG00000106144|P42575-2|CASP2	28.2542754592877	0.7411748056684583	3				NaN	NaN	0	NaN	7040	4904	11945
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11947	35.324	NaN	1305.7	30	0	89.803	0.106	+			4606	ATLLASNEAFK	11	59	582.8164053095862	NaN	0	582.8179931640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATLLASNEAFK_	ENSG00000185825|ENST00000345046|BCAP31;nc|ENSG00000185825|P51572-2|BCAP31	34.08650109265054	0.41350691770670583	3				NaN	NaN	0	NaN	7041	4904	11945
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11948	35.326	NaN	890.45	30	0	65.986	0.106	+			13050	GEYAVHVL	8	39	444.2337616035384	NaN	0	444.2334899902344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEYAVHVL_	ENSG00000196924|ENST00000369850|FLNA;FLNA|p.A1026Lfs*20|1|0.42|ENSG00000196924|chrX:154361439-154361439|C/-|frameshift_variant;FLNA|p.G2237Efs*109|1|0.28|ENSG00000196924|chrX:154352240-154352240|C/-|frameshift_variant;FLNA|p.Q1716Sfs*23|2|0.38|ENSG00000196924|chrX:154354896-154354896|G/-|frameshift_variant;FLNA|p.R2520Vfs*16|1|0.7|ENSG00000196924|chrX:154349560-154349560|G/-|frameshift_variant;nc|ENSG00000196924|P21333-2|FLNA	44.53106598305862	1.7418937515398478	3				NaN	NaN	0	NaN	7042	4904	11945
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11949	35.327	NaN	1498.1	30	0	159.06	0.036			+	-1	VMYKMKWG	8	57	529.7605888240856	1057.5066247149712	2	529.7628173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_VM(Oxidation (M))YKMKWG_	REV__ENST00000375614.6_1_11:111431100-111431226:+|nuORF	42.47446043378293	0.6409579893742323	3				NaN	NaN	0	NaN	7043	4904	11945
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11955	35.342	NaN	2509.1	30	0	246.92	0.214	+			8402	EAPAVLIPAQ	10	64	504.79052096549594	1007.5664889977919	2	504.7894287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EAPAVLIPAQ_	ENST00000570069.5_1_16:1827428-1828166:+|nuORF	56.72105179125745	0.3956618550748046	3				NaN	NaN	0	NaN	7046	4907	11954
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11956	35.346	NaN	1318.3	30	0	365.73	0.036			+	39829	STLKKLFNK	9	38	360.22454833984375	NaN	0	360.22454833984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STLKKLFNK_	REV__tr|U7SHE5|U7SHE5_FUSNUMORNrepeatproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02282PE=4SV=1	47.657333605630114	0.2228375344433429	3				NaN	NaN	0	NaN	7047	4907	11954
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11967	35.378	NaN	3890.4	30	0	448.91	0.214	+			42635	TAVGHALVL	9	50	440.76635004783964	879.5181471624793	2	440.7658996582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAVGHALVL_	COL6A3|p.A2956Lfs*45|1|0.33|ENSG00000163359|chr2:237336234-237336234|C/-|frameshift_variant;COL6A3|p.A2957Lfs*44|1|0.33|ENSG00000163359|chr2:237336232-237336232|A/-|frameshift_variant;COL6A3|p.G3016Vfs*19|1|0.34|ENSG00000163359|chr2:237334810-237334810|G/-|frameshift_variant;ENSG00000163359|ENST00000295550|COL6A3;ENST00000491769.1_1_2:238233419-238250825:-|nuORF;nc|ENSG00000163359|P12111-2|COL6A3;nc|ENSG00000163359|P12111-4|COL6A3	60.29395666154354	0.21116425950210296	3				NaN	NaN	0	NaN	7052	4913	11966
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11968	35.381	NaN	2980.4	30	0	228.01	0.106	+			1009	AEKLEALSV	9	59	480.27438860303005	958.5342242728601	2	480.27398681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEKLEALSV_	ENSG00000099901|ENST00000430524|RANBP1;ENST00000435265.5_1_22:20114425-20114572:+|nuORF;ENST00000448394.2_1_22:20110177-20114572:+|nuORF;nc|ENSG00000099901|P43487-2|RANBP1;nc|ENSG00000099901|P43487|RANBP1	65.46538089061403	0.16805504838372562	3				NaN	NaN	0	NaN	7053	4913	11966
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11969	35.383	NaN	2398.3	30	0	372.21	0.106	+			5963	AVLLLQVGAG	10	60	470.7953115917722	939.5760702503444	2	470.7943115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVLLLQVGAG_	nc|ENSG00000167702|Q96AC6|KIFC2	37.15910966729921	0.575322462179216	3				NaN	NaN	0	NaN	7054	4913	11966
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11970	35.385	NaN	2398.4	30	0	250.05	0.106	+			550	ADFETVRM	8	53	484.72927145935984	967.4439899855197	2	484.7282409667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ADFETVRM_	ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2	54.776311868738084	0.5534952410049249	3				NaN	NaN	0	NaN	7055	4913	11966
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11971	35.387	NaN	2222.6	30	0	315.25	0.106	+			50243	WPHLTEGII	9	61	533.2908497594012	NaN	0	533.7772827148438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_WPHLTEGII_	ENSG00000115839|ENST00000264158|RAB3GAP1;nc|ENSG00000115839|Q15042-3|RAB3GAP1;nc|ENSG00000115839|Q15042-4|RAB3GAP1	40.77816245573522	0.2702456086868081	3				NaN	NaN	0	NaN	7056	4913	11966
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11972	35.389	NaN	2839.3	30	0	299.87	0.106	+			1381	AEVKGVYQF	9	60	520.7741059706426	1039.5336590080851	2	520.7747802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEVKGVYQF_	ENSG00000166557|ENST00000299705|TMED3;nc|ENSG00000166557|Q9Y3Q3-2|TMED3	51.19269402634007	0.2889735674168909	3				NaN	NaN	0	NaN	7057	4913	11966
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11973	35.39	NaN	1181.3	30	0	95.345	0.033	+			11826	FSVNGKVL	8	52	432.25317690791513	862.4918008826303	2	432.25311279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FSVNGKVL_	ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2;NOMO1|p.P1102Hfs*42|1|0.36|ENSG00000103512|chr16:14886838-14886838|C/-|frameshift_variant;NOMO1|p.P141Sfs*12|1|0.33|ENSG00000103512|chr16:14846592-14846593|-/AG|frameshift_variant	76.7741389293348	0.3504530765139327	3				NaN	NaN	0	NaN	7058	4913	11966
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11977	35.404	NaN	7309.2	30	0	969.1	0.214	+			4024	ATDAVGIVLK	10	69	493.7973571819838	985.5801614307676	2	493.7971496582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATDAVGIVLK_	ENSG00000132676|ENST00000368336|DAP3;ENST00000462978.1_1_1:155697409-155701908:+|nuORF;nc|ENSG00000132676|P51398-2|DAP3;nc|ENSG00000132676|P51398-3|DAP3	117.81106730687013	0.030421278947300796	3				NaN	NaN	0	NaN	7059	4916	11976
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11978	35.408	NaN	6078.8	30	0	654.65	0.106			+	25427	LPMRHDLV	8	70	490.77023476980634	979.5259166064127	2	490.76983642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LPMRHDLV_	REV__ENST00000432045.6_1_7:130562562-130562694:-|nuORF	44.116797842482775	0.6307669463330267	3				NaN	NaN	0	NaN	7060	4916	11976
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11979	35.41	NaN	1897.7	30	0	268.82	0.106				-1	DPNIDQRSM	9	63	546.2428970198051	1090.4712411064102	2	546.2434692382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_DPNIDQRSM(Oxidation (M))_	ENST00000426448.1_1_22:20805532-20806108:+|nuORF	30.317721548370564	0.5199124245378496	3				NaN	NaN	0	NaN	7061	4916	11976
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11980	35.411	NaN	1050	30	0	185.9	0.106			+	14915	GTLVYLVSR	9	30	336.53445781668654	1006.5815440502597	3	336.5340881347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTLVYLVSR_	REV__CSMD1|p.P1459Qfs*24|1|0.09|ENSG00000183117|chr8:3223840-3223840|G/-|frameshift_variant;REV__CSMD1|p.V815Lfs*13|1|0.05|ENSG00000183117|chr8:3396347-3396348|-/AACAG|frameshift_variant;REV__ENSG00000183117|ENST00000635120|CSMD1;REV__nc|ENSG00000183117|Q96PZ7-2|CSMD1;REV__nc|ENSG00000183117|Q96PZ7-3|CSMD1;REV__nc|ENSG00000183117|Q96PZ7-4|CSMD1	16.473147378115264	0.6112419832031293	3				NaN	NaN	0	NaN	7062	4916	11976
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11981	35.413	NaN	2798.6	30	0	255.74	0.036	+			20506	KFFIDPNEV	9	74	554.7874069501805	1107.560260967161	2	554.786376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KFFIDPNEV_	CREB3L4|p.L71F|1|0.17|ENSG00000143578|chr1:153968966-153968966|C/T|missense_variant	31.529811441608018	0.5085848003137583	3				NaN	NaN	0	NaN	7063	4916	11976
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11986	35.428	NaN	1765.7	30	0	182.66	0.214			+	18242	INYYDGGGFF	10	58	576.753332993273	1151.492113053346	2	576.75390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_INYYDGGGFF_	REV__tr|U7SNI5|U7SNI5_FUSNUSingle-stranded-DNA-specificexonucleaseRecJOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01772PE=3SV=1	35.61828744233558	0.588957954432594	3				NaN	NaN	0	NaN	7065	4919	11985
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11987	35.431	NaN	1317.7	30	0	226.3	0.032			+	41951	SVVSVLGPA	9	33	414.7452697753906	NaN	0	414.7452697753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVVSVLGPA_	REV__ENST00000472558.6_1_12:6657995-6658223:-|nuORF	45.9519527083369	0.2345902329052062	3				NaN	NaN	0	NaN	7066	4919	11985
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11992	35.445	NaN	2726.9	30	0	349.69	0.143	+			18052	IITVDPKPK	9	54	505.8161435035161	1009.6177340738323	2	505.8154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IITVDPKPK_	tr|U7T4G6|U7T4G6_FUSNURfaE,domainIOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00333PE=4SV=1	27.882242232435846	0.5426732730940306	3				NaN	NaN	0	NaN	7068	4922	11991
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11996	35.461	NaN	5724.1	30	0	770.46	0.214				-1	SRLEKKHC	8	64	529.2823623949438	1056.5501718566875	2	529.2822875976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SRLEKKHC(Carbamidomethyl (C))_	ENST00000476243.5_1_17:16252515-16253250:-|nuORF	40.77816245573522	0.6514838689002179	3				NaN	NaN	0	NaN	7069	4925	11995
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11997	35.465	NaN	2063.6	30	0	163.58	0.106				-1	ITDTLCVGPV	10	65	537.7776063546513	1073.5406597761025	2	537.777099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_ITDTLC(Carbamidomethyl (C))VGPV_	ENSG00000142920|ENST00000294517|AZIN2;ENST00000471119.5_1_1:33546965-33585780:+|nuORF;ENST00000475935.5_1_1:33585534-33585780:+|nuORF;ENST00000478204.5_1_1:33557816-33585780:+|nuORF;ENST00000481886.5_1_1:33546965-33585780:+|nuORF;nc|ENSG00000142920|Q96A70-2|AZIN2	47.657333605630114	0.47858658696240314	3				NaN	NaN	0	NaN	7070	4925	11995
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11998	35.467	NaN	2228.8	30	0	128.84	0.034	+			25902	LSGGSKLQIA	10	66	487.2891304123972	972.5637078915944	2	487.2900085449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSGGSKLQIA_	ENSG00000143341|ENST00000271588|HMCN1;HMCN1|p.G3718Afs*6|1|0.04|ENSG00000143341|chr1:186113995-186113995|G/-|frameshift_variant;HMCN1|p.L3491Hfs*10|1|0.12|ENSG00000143341|chr1:186095419-186095420|-/ATAT|frameshift_variant;HMCN1|p.S4801Rfs*11|1|0.07|ENSG00000143341|chr1:186145536-186145537|-/AGAATAA|frameshift_variant;nc|ENSG00000143341|Q96RW7-2|HMCN1	56.72105179125745	0.3956618550748046	3				NaN	NaN	0	NaN	7071	4925	11995
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12006	35.485	NaN	4039.3	30	0	861.15	0.214			+	7672	DLEHVSALV	9	51	491.76430691849856	981.5140609037971	2	491.7636413574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DLEHVSALV_	REV__ENSG00000205593|ENST00000413817|DENND6B;REV__ENST00000495607.5_1_22:50752441-50754573:-|nuORF	40.5726180659479	0.4135428067754104	3				NaN	NaN	0	NaN	7076	4928	12005
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12007	35.488	NaN	5994.1	30	0	950.74	0.106			+	7377	DDRTLIIL	8	63	479.78228808707235	957.5500232409447	2	479.78155517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DDRTLIIL_	REV__nc|ENSG00000184029|P56555|DSCR4	62.107414245175825	0.4809183816468817	3				NaN	NaN	0	NaN	7077	4928	12005
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12008	35.49	NaN	4279.5	30	0	585.22	0.106	+			14180	GSQFFITTK	9	63	514.7743711822419	1027.5341894312837	2	514.7739868164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GSQFFITTK_	ENSG00000114857|ENST00000232978|NKTR;ENSG00000138398|ENST00000260970|PPIG;nc|ENSG00000138398|Q13427-2|PPIG;NKTR|p.K429Nfs*37|1|0.2|ENSG00000114857|chr3:42636986-42636986|A/-|frameshift_variant;NKTR|p.N670Ifs*43|1|0.14|ENSG00000114857|chr3:42637707-42637707|A/-|frameshift_variant;NKTR|p.R859Kfs*9|1|0.28|ENSG00000114857|chr3:42638271-42638272|-/A|frameshift_variant;NKTR|p.S692Ffs*17|1|0.1|ENSG00000114857|chr3:42637779-42637791|CAAGGAGCAGATC/-|frameshift_variant;PPIG|p.N420Mfs*33|1|0.4|ENSG00000138398|chr2:169636512-169636512|A/-|frameshift_variant	120.30596017624542	0.02101454110788768	3				NaN	NaN	0	NaN	7078	4928	12005
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12009	35.492	NaN	2318.6	30	0	1251.1	0.106				-1	 	0	39	357.21493550170015	712.4153180702003	2	357.21453857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7079	4928	12005
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12010	35.494	NaN	2626.9	30	0	476.45	0.106	+			2528	APVPKKLLMM	10	59	564.337366929102	1126.660180925004	2	564.3369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_APVPKKLLMM_	ENSG00000140988|ENST00000343262|RPS2;ENST00000397318.4_1_X:40794237-40794825:-|nuORF;ENST00000434010.1_1_20:32710701-32710965:+|nuORF;ENST00000443417.1_1_9:102879039-102879699:-|nuORF;ENST00000479476.1_1_18:68097766-68098228:+|nuORF;ENST00000532746.5_2_16:2012101-2013785:-|nuORF;ENST00000533872.5_1_16:2012101-2013018:-|nuORF;RPL18-RPS2|1|fusion	29.14955571784316	0.6417842315402807	3				NaN	NaN	0	NaN	7080	4928	12005
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12011	35.496	NaN	1298.9	30	0	234.91	0.033	+			878	AEHGAWAL	8	46	427.7113583842245	853.4081638352491	2	427.7109069824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEHGAWAL_	ENSG00000157613|ENST00000621158|CREB3L1	35.200714571348534	0.6875396545722289	3				NaN	NaN	0	NaN	7081	4928	12005
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12016	35.51	NaN	5077.7	30	0	783.43	0.214	+			38564	SSFGNMIYK	9	69	523.7530270004129	1045.4915010676257	2	523.7529907226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSFGNMIYK_	ENSG00000120137|ENST00000239231|PANK3	64.20726635412375	0.17854274437659667	3				NaN	NaN	0	NaN	7083	4931	12015
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12017	35.513	NaN	2657.5	30	0	242.94	0.035	+			9134	EGLLVGLKNG	10	58	500.29584331574387	998.5771336982878	2	500.29547119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EGLLVGLKNG_	ENSG00000163913|ENST00000348417|IFT122;ENST00000506507.5_1_3:129168750-129233481:+|nuORF;nc|ENSG00000163913|Q9HBG6-10|IFT122;nc|ENSG00000163913|Q9HBG6-11|IFT122;nc|ENSG00000163913|Q9HBG6-3|IFT122;nc|ENSG00000163913|Q9HBG6-4|IFT122;nc|ENSG00000163913|Q9HBG6-5|IFT122;nc|ENSG00000163913|Q9HBG6-6|IFT122;nc|ENSG00000163913|Q9HBG6-7|IFT122;nc|ENSG00000163913|Q9HBG6-8|IFT122;nc|ENSG00000163913|Q9HBG6-9|IFT122	66.42927471994793	0.3073667423445326	3				NaN	NaN	0	NaN	7084	4931	12015
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12023	35.53	NaN	2132.6	30	0	322.33	0.214			+	18339	IQALGPLSSAL	11	59	535.3172060332593	NaN	0	535.3161010742188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IQALGPLSSAL_	REV__ENSG00000114982|ENST00000431828|KANSL3;REV__ENST00000447759.5_3_2:97261350-97293793:-|nuORF;REV__ENST00000597150.5_1_2:97261350-97297069:-|nuORF;REV__nc|ENSG00000114982|Q9P2N6-4|KANSL3;REV__nc|ENSG00000114982|Q9P2N6-5|KANSL3;REV__nc|ENSG00000114982|Q9P2N6-6|KANSL3;REV__nc|ENSG00000114982|Q9P2N6|KANSL3	41.080066990542036	0.3793850210388171	3				NaN	NaN	0	NaN	7087	4934	12022
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12024	35.533	NaN	1054.5	30	0	83.185	0.035	+			10724	FADPLKRF	8	58	497.2810974121094	NaN	0	497.2810974121094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FADPLKRF_	tr|U7SP80|U7SP80_FUSNUAutotransporterdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01760PE=4SV=1	44.116797842482775	1.7418937515398478	3				NaN	NaN	0	NaN	7088	4934	12022
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12030	35.55	NaN	2468	30	0	208.47	0.215	+			27798	MSDTTFKAL	9	64	507.2525660051922	1012.4905790771844	2	507.25244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MSDTTFKAL_	CAPZA1|p.R259H|1|0.31|ENSG00000116489|chr1:112670047-112670047|G/A|missense_variant;CAPZA2|p.R259C|1|0.25|ENSG00000198898|chr7:116917781-116917781|C/T|missense_variant;ENSG00000116489|ENST00000263168|CAPZA1;ENSG00000198898|ENST00000361183|CAPZA2;ENST00000426421.5_1_7:116544367-116557918:+|nuORF;ENST00000466066.1_1_1:113202257-113212751:+|nuORF;ENST00000565906.2_1_15:89532752-89533049:-|nuORF	53.08895987439943	0.27122541748218487	3				NaN	NaN	0	NaN	7091	4937	12029
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12031	35.553	NaN	1853.3	30	0	243.3	0.036			+	-1	RGTVGAKCLC	10	62	532.768798828125	NaN	0	532.768798828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_RGTVGAKC(Carbamidomethyl (C))LC_	REV__ENSG00000130702|ENST00000252999|LAMA5;REV__LAMA5|p.A3459Qfs*25|1|0.42|ENSG00000130702|chr20:62310736-62310736|C/-|frameshift_variant;REV__LAMA5|p.L2137Afs*29|1|0.31|ENSG00000130702|chr20:62322110-62322111|-/G|frameshift_variant;REV__LAMA5|p.P3242Rfs*47|1|0.41|ENSG00000130702|chr20:62311700-62311700|C/-|frameshift_variant	25.57405402267927	0.4162033004763879	3				NaN	NaN	0	NaN	7092	4937	12029
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12036	35.567	NaN	2174.3	30	0	401.06	0.214			+	9127	EGLILHLH	8	53	466.27172529087625	930.5288976485525	2	466.271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EGLILHLH_	REV__ENST00000591770.1_1_17:76164697-76167257:+|nuORF	26.79610172149135	0.7524337208463756	3				NaN	NaN	0	NaN	7094	4940	12035
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12037	35.571	NaN	1469.2	30	0	110.82	0.037			+	-1	SCSRRRGLR	9	59	574.3144535878032	NaN	0	574.314697265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SC(Carbamidomethyl (C))SRRRGLR_	REV__ENST00000582707.5_1_18:158558-163316:+|nuORF	30.317721548370564	0.32449924987115025	3				NaN	NaN	0	NaN	7095	4940	12035
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12043	35.586	NaN	5162.4	30	0	428.67	0.214				-1	 	0	73	535.7620327267826	1069.5095125203652	2	535.7618408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7098	4943	12042
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12044	35.589	NaN	2923.8	30	0	601.28	0.106			+	44729	TTLRFGAPL	9	56	488.2852411572615	974.555929381323	2	488.2848205566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTLRFGAPL_	REV__ENSG00000139220|ENST00000549396|PPFIA2;REV__nc|ENSG00000139220|O75334-2|PPFIA2;REV__nc|ENSG00000139220|O75334-3|PPFIA2;REV__nc|ENSG00000139220|O75334-4|PPFIA2;REV__nc|ENSG00000139220|O75334-5|PPFIA2;REV__nc|ENSG00000139220|O75334-6|PPFIA2;REV__nc|ENSG00000139220|O75334-7|PPFIA2;REV__nc|ENSG00000139220|O75334-8|PPFIA2	40.77816245573522	0.41113185337114944	3				NaN	NaN	0	NaN	7099	4943	12042
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12045	35.591	NaN	2747.4	30	0	278.09	0.106	+			42985	TEKIISAEL	9	61	502.2874337697512	1002.5603146063024	2	502.2864685058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TEKIISAEL_	ENSG00000073614|ENST00000399788|KDM5A;nc|ENSG00000073614|P29375-2|KDM5A	51.19269402634007	0.2889735674168909	3				NaN	NaN	0	NaN	7100	4943	12042
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12046	35.593	NaN	2013.1	30	0	205.3	0.106	+			30203	PSQPVVTEITK	11	66	599.8381247053186	1197.661696477437	2	599.8377685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PSQPVVTEITK_	ENSG00000154134|ENST00000397801|ROBO3;nc|ENSG00000154134|Q96MS0-2|ROBO3;ROBO3|p.D1059Tfs*9|1|0.29|ENSG00000154134|chr11:124878121-124878121|G/-|frameshift_variant	32.61576334919814	0.6476784391172209	3				NaN	NaN	0	NaN	7101	4943	12042
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12047	35.595	NaN	1603.9	30	0	223.84	0.035				-1	VMPNIQYQ	8	58	504.7432723932479	NaN	0	504.7425231933594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_VM(Oxidation (M))PNIQYQ_	ENSG00000185591|ENST00000327443|SP1;nc|ENSG00000185591|P08047-2|SP1;nc|ENSG00000185591|P08047-3|SP1	35.200714571348534	1.7418937515398478	3				NaN	NaN	0	NaN	7102	4943	12042
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12051	35.609	NaN	2726.1	30	0	293.39	0.214	+			42305	TAFDVAEKY	9	66	522.2563103996541	1042.4980678661082	2	522.25634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAFDVAEKY_	ENSG00000072110|ENST00000394419|ACTN1;ENST00000554508.5_1_14:69367621-69387744:-|nuORF;nc|ENSG00000072110|P12814-2|ACTN1;nc|ENSG00000072110|P12814-4|ACTN1;nc|ENSG00000072110|P12814|ACTN1	78.26377905018397	0.10505600812668463	3				NaN	NaN	0	NaN	7103	4946	12050
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12052	35.612	NaN	1354.9	30	0	105.33	0.036	+			42676	TAYWMPAEK	9	61	548.7605612118193	1095.5065694904386	2	548.7615356445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAYWMPAEK_	ENSG00000121316|ENST00000240617|PLBD1;PLBD1|p.N214Tfs*4|1|0.06|ENSG00000121316|chr12:14536628-14536628|T/-|frameshift_variant;PLBD1|p.Y42H|1|0.35|ENSG00000121316|chr12:14553404-14553404|A/G|missense_variant	47.95952297671804	0.32689736945648856	3				NaN	NaN	0	NaN	7104	4946	12050
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12056	35.626	NaN	14868	30	0	4470.8	0.214	+			20378	KESTLHLVL	9	70	520.311147718432	1038.607742503664	2	520.311279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KESTLHLVL_	ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000392399.3_1_2:137087013-137087097:-|nuORF;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;UBB|p.D191Tfs*35|2|0.18|ENSG00000170315|chr17:16382471-16382471|C/-|frameshift_variant;UBB|p.D191Tfs*35|2|0.18|ENSG00000170315|chr17:16382471-16382471|C/-|frameshift_variant	98.62937762414208	0.04060045538121712	3				NaN	NaN	0	NaN	7105	4949	12055
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12057	35.63	NaN	2021	30	0	170.22	0.106	+			46980	VKLVVEWD	8	53	494.2792959562712	986.5440389793424	2	494.27850341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VKLVVEWD_	ENSG00000103404|ENST00000219689|USP31;USP31|p.H723Tfs*68|1|0.2|ENSG00000103404|chr16:23079956-23079956|C/-|frameshift_variant	50.0245360154114	0.5941082100236891	3				NaN	NaN	0	NaN	7106	4949	12055
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12058	35.632	NaN	1898.7	30	0	177.03	0.106			+	6736	CAPPRSNSSPM	11	56	573.757175142219	1145.499797351238	2	573.7579345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_CAPPRSNSSPM_	REV__ENSG00000172987|ENST00000370552|HPSE2;REV__HPSE2|p.F424Lfs*28|1|0.2|ENSG00000172987|chr10:98614952-98614952|A/-|frameshift_variant;REV__nc|ENSG00000172987|Q8WWQ2-2|HPSE2;REV__nc|ENSG00000172987|Q8WWQ2-3|HPSE2;REV__nc|ENSG00000172987|Q8WWQ2-4|HPSE2	32.81241826257853	0.645615689454792	3				NaN	NaN	0	NaN	7107	4949	12055
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12059	35.634	NaN	1909.8	30	0	343.32	0.106			+	31328	QIQQPPVL	8	50	461.77140434016974	921.5282557471395	2	461.7710876464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QIQQPPVL_	REV__ENSG00000055609|ENST00000262189|KMT2C;REV__KMT2C|p.F4496Lfs*21|3|0.28|ENSG00000055609|chr7:152148439-152148439|A/-|frameshift_variant;REV__KMT2C|p.I4868Lfs*37|1|0.28|ENSG00000055609|chr7:152138837-152138837|T/-|frameshift_variant;REV__KMT2C|p.K2867Dfs*7|1|0.28|ENSG00000055609|chr7:152176853-152176854|TT/-|frameshift_variant;REV__KMT2C|p.S2816Ifs*6|1|0.44|ENSG00000055609|chr7:152177007-152177008|-/T|frameshift_variant;REV__KMT2C|p.T3715Qfs*4|1|0.34|ENSG00000055609|chr7:152162434-152162434|T/-|frameshift_variant;REV__nc|ENSG00000055609|Q8NEZ4-2|KMT2C;REV__nc|ENSG00000055609|Q8NEZ4-3|KMT2C	35.200714571348534	0.6875396545722289	3				NaN	NaN	0	NaN	7108	4949	12055
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12060	35.636	NaN	1765.7	30	0	127.44	0.036	+			51371	YTIGKEIID	9	65	526.2853564605174	1050.5561599878347	2	526.2866821289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YTIGKEIID_	ENSG00000123416|ENST00000336023|TUBA1B;ENSG00000127824|ENST00000248437|TUBA4A;ENSG00000167552|ENST00000301071|TUBA1A;ENSG00000167553|ENST00000301072|TUBA1C;ENST00000462806.5_1_2:220116196-220118580:-|nuORF;ENST00000530835.1_1_11:90015825-90016947:+|nuORF;ENST00000548363.1_1_12:49580068-49582762:-|nuORF;ENST00000550254.1_1_12:49580068-49580335:-|nuORF;nc|ENSG00000127824|P68366-2|TUBA4A;nc|ENSG00000167552|Q71U36-2|TUBA1A;TUBA4A|p.V182Gfs*32|1|0.04|ENSG00000127824|chr2:219251156-219251157|-/TACACCA|frameshift_variant	47.657333605630114	0.33044192980041115	3				NaN	NaN	0	NaN	7109	4949	12055
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12064	35.65	NaN	2167	30	0	226.96	0.215	+			235	AAMKALQAL	9	52	458.76788476366545	915.5212165941309	2	458.7674255371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAMKALQAL_	ENSG00000040341|ENST00000524300|STAU2;ENST00000521451.5_1_8:74528012-74659064:-|nuORF;nc|ENSG00000040341|Q9NUL3-2|STAU2;nc|ENSG00000040341|Q9NUL3-3|STAU2;nc|ENSG00000040341|Q9NUL3-7|STAU2;nc|ENSG00000040341|Q9NUL3-8|STAU2;STAU2|p.C491Lfs*31|1|0.39|ENSG00000040341|chr8:73552072-73552073|-/G|frameshift_variant;STAU2|p.K274Nfs*22|1|0.09|ENSG00000040341|chr8:73613813-73613813|T/-|frameshift_variant;STAU2|p.K410Ifs*9|1|0.07|ENSG00000040341|chr8:73552313-73552314|-/A|frameshift_variant;STAU2|p.L259Tfs*15|2|0.48|ENSG00000040341|chr8:73613860-73613861|-/T|frameshift_variant	53.351449002276354	0.2690372970092375	3				NaN	NaN	0	NaN	7110	4952	12063
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12065	35.653	NaN	1500.5	30	0	187.7	0.106			+	24924	LKSFQLVDQ	9	61	539.3018388703007	NaN	0	539.3013916015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LKSFQLVDQ_	REV__ENSG00000144026|ENST00000295208|ZNF514	37.81151784470057	0.28666463014928195	3				NaN	NaN	0	NaN	7111	4952	12063
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12066	35.655	NaN	1853.3	30	0	84.001	0.036			+	-1	YRGCYVQY	8	63	554.7484529382765	NaN	0	554.7476196289062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_YRGC(Carbamidomethyl (C))YVQY_	REV__ENSG00000094631|ENST00000334136|HDAC6;REV__nc|ENSG00000094631|Q9UBN7-2|HDAC6	33.51558372728122	1.7418937515398478	3				NaN	NaN	0	NaN	7112	4952	12063
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12075	35.685	NaN	2016.9	30	0	165.23	0.214	+			34946	SAAKLLTEY	9	56	498.2743447192391	994.5341365052782	2	498.2734069824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAAKLLTEY_	ENSG00000189221|ENST00000338702|MAOA;MAOA|p.G405Afs*12|1|0.26|ENSG00000189221|chrX:43741995-43741995|G/-|frameshift_variant	46.45678178249821	0.34452392205506005	3				NaN	NaN	0	NaN	7115	4958	12074
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12076	35.688	NaN	2658.5	30	0	131.6	0.106	+			41547	SVQDVIYVR	9	64	539.7987822754836	1077.5830116177672	2	539.7985229492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVQDVIYVR_	ENSG00000099282|ENST00000373290|TSPAN15	79.48907831485694	0.09975780661107167	3				NaN	NaN	0	NaN	7116	4958	12074
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12077	35.69	NaN	887.38	30	0	245.84	0.032				-1	 	0	34	412.8025458377884	823.5905387423768	2	412.8019104003906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7117	4958	12074
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12082	35.705	NaN	2694.7	30	0	299.21	0.214	+			41548	SVQDVIYVR	9	56	539.7987822754836	1077.5830116177672	2	539.798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVQDVIYVR_	ENSG00000099282|ENST00000373290|TSPAN15	78.26377905018397	0.10505600812668463	3				NaN	NaN	0	NaN	7119	4961	12081
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12083	35.708	NaN	1994.6	30	0	440.95	0.034	+			24183	LEPVNRKL	8	57	484.7986216221675	967.582690311135	2	484.7975769042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LEPVNRKL_	tr|U7T180|U7T180_FUSNUValine--tRNAligaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=valSPE=3SV=1	24.20275056022122	0.7724576178584145	3				NaN	NaN	0	NaN	7120	4961	12081
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12088	35.722	NaN	1841.9	30	0	191.12	0.214			+	51164	YPCMRILK	8	57	512.2771515840313	1022.5397502348627	2	512.2772827148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YPCMRILK_	REV__ENSG00000176571|ENST00000518476|CNBD1	45.9519527083369	0.6193794311207887	3				NaN	NaN	0	NaN	7122	4964	12087
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12089	35.726	NaN	1604.7	30	0	107.55	0.106			+	37985	SPIHVDRVE	9	61	526.279509587814	1050.544466242428	2	526.28515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SPIHVDRVE_	REV__ENSG00000074755|ENST00000381638|ZZEF1;REV__ENST00000574474.1_1_17:3979912-4046255:-|nuORF;REV__nc|ENSG00000074755|O43149-3|ZZEF1;REV__ZZEF1|p.K2387Sfs*40|1|0.38|ENSG00000074755|chr17:4022761-4022761|T/-|frameshift_variant	39.252832667884924	0.4290233611298554	3				NaN	NaN	0	NaN	7123	4964	12087
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12090	35.728	NaN	1302.5	30	0	547.51	0.035			+	24768	LIAVLGAKIL	10	32	337.5708110942885	1009.6906038830655	3	337.5708923339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LIAVLGAKIL_	REV__tr|U7SSH7|U7SSH7_FUSNUBranched-chainaminoacidtransportsystemIIcarrierproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01455PE=3SV=1	18.262085536374414	0.7236521404371882	3				NaN	NaN	0	NaN	7124	4964	12087
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12094	35.742	NaN	4950.7	30	0	1019.6	0.214	+			11871	FTGLIGPMK	9	62	482.27038560775287	962.5262182823058	2	482.2695007324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FTGLIGPMK_	CON__ENSEMBL:ENSBTAP00000031900;ENSG00000047457|ENST00000264613|CP;ENST00000467010.2_1_8:92169620-92169905:+|nuORF;ENST00000489736.5_1_3:148904295-148925363:-|nuORF;ENST00000490639.5_1_3:148895590-148939579:-|nuORF;ENST00000497797.5_1_3:148905800-148917562:-|nuORF	49.44154591367651	0.3095138337212152	3				NaN	NaN	0	NaN	7125	4967	12093
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12095	35.745	NaN	4024.1	30	0	255.35	0.106	+			10453	EVNKFQMAY	9	66	565.2710450219032	1128.5275371106063	2	565.2710571289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EVNKFQMAY_	ENSG00000140319|ENST00000267884|SRP14	102.7733458925114	0.03637199559902695	3				NaN	NaN	0	NaN	7126	4967	12093
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12096	35.747	NaN	1931.8	30	0	171.69	0.106	+			11040	FEMATRAAL	9	62	505.2606343757843	1008.5067158183687	2	505.26025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FEMATRAAL_	ENSG00000067560|ENST00000418115|RHOA	63.53385203322761	0.18415635464017938	3				NaN	NaN	0	NaN	7127	4967	12093
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12097	35.749	NaN	8065.2	30	0	5412.1	0.106				-1	 	0	68	559.9555250208749	1676.8447456628246	3	559.9557495117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7128	4967	12093
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12098	35.751	NaN	2197.3	30	0	320.38	0.034	+			14425	GTAQLTLLH	9	54	477.27480753872703	952.5350621442541	2	477.2740173339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTAQLTLLH_	ENSG00000254470|ENST00000532090|AP5B1;ENST00000316846.2_11:65545618-65547282:-|nuORF	79.71258880314673	0.09879134589249085	3				NaN	NaN	0	NaN	7129	4967	12093
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12103	35.765	NaN	1725.6	30	0	202.32	0.143	+			29285	NYIHVGAQL	9	56	507.77188633389443	NaN	0	507.7716979980469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NYIHVGAQL_	ENSG00000176658|ENST00000318217|MYO1D	47.91560031466742	0.22105767942158736	3				NaN	NaN	0	NaN	7131	4970	12102
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12109	35.783	NaN	3967	30	0	1309.5	0.215	+			49903	VYTTMAEHF	9	68	549.7498885900658	1097.4852242469315	2	549.7501220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYTTMAEHF_	ENSG00000117472|ENST00000372003|TSPAN1;TSPAN1|p.T119M|1|0.33|ENSG00000117472|chr1:46184801-46184801|C/T|missense_variant	82.30502934623384	0.08758161712619916	3				NaN	NaN	0	NaN	7134	4973	12108
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12110	35.787	NaN	5051.9	30	0	630.21	0.033				-1	 	0	58	422.26889804831404	842.5232431634281	2	422.2685241699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7135	4973	12108
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12114	35.801	NaN	2845.9	30	0	465.93	0.214			+	10534	EWNSTVAVV	9	66	502.75628858359755	1003.4980242339951	2	502.7558288574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EWNSTVAVV_	REV__ENSG00000249715|ENST00000624922|FER1L5;REV__FER1L5|p.K1269Efs*5|1|0.36|ENSG00000249715|chr2:96694446-96694447|AA/-|frameshift_variant;REV__FER1L5|p.Q1290Pfs*29|1|0.44|ENSG00000249715|chr2:96695548-96695549|-/C|frameshift_variant	58.78195531508484	0.22376836668196862	3				NaN	NaN	0	NaN	7136	4976	12113
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12115	35.804	NaN	3321	30	0	302.82	0.106	+			9791	ENVMRVRGP	9	68	529.2823623949438	1056.5501718566875	2	529.7841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ENVMRVRGP_	ENSG00000114698|ENST00000354952|PLSCR4;ENST00000475019.1_1_3:145914331-145918851:-|nuORF;nc|ENSG00000114698|Q9NRQ2-2|PLSCR4	44.116797842482775	0.37197099687881774	3				NaN	NaN	0	NaN	7137	4976	12113
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12116	35.806	NaN	1889.8	30	0	326.76	0.106			+	-1	DSIEVMLKI	9	67	532.2880807451843	NaN	0	532.287841796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_DSIEVM(Oxidation (M))LKI_	REV__ENSG00000086967|ENST00000357701|MYBPC2;REV__MYBPC2|p.K668Efs*24|1|0.33|ENSG00000086967|chr19:50454350-50454351|-/G|frameshift_variant;REV__MYBPC2|p.P573Lfs*7|1|0.26|ENSG00000086967|chr19:50451968-50451968|C/-|frameshift_variant	66.42927471994793	0.121898005645852	3				NaN	NaN	0	NaN	7138	4976	12113
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12117	35.808	NaN	1362.6	30	0	156.89	0.106			+	17971	IGYEQPIVI	9	57	516.2909593448054	1030.5673657564107	2	516.2909545898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IGYEQPIVI_	REV__ENSG00000145725|ENST00000358359|PPIP5K2;REV__nc|ENSG00000145725|O43314-2|PPIP5K2;REV__PPIP5K2|p.L906Cfs*40|1|0.19|ENSG00000145725|chr5:103177941-103177941|T/-|frameshift_variant;REV__PPIP5K2|p.V1179Yfs*3|2|0.15|ENSG00000145725|chr5:103194934-103194934|A/-|frameshift_variant	42.396135135203025	0.392153681582562	3				NaN	NaN	0	NaN	7139	4976	12113
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12118	35.81	NaN	1295.9	30	0	100.99	0.035	+			25000	LLEWPVAQG	9	53	506.7763948429956	NaN	0	506.7761535644531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LLEWPVAQG_	ENST00000595369.1_1_19:6759548-6763810:-|nuORF	27.882242232435846	0.3367954786602879	3				NaN	NaN	0	NaN	7140	4976	12113
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12124	35.826	NaN	4656.2	30	0	386.45	0.214	+			35954	SEGPLRPVL	9	70	484.2823332301785	966.550113527157	2	484.2817077636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEGPLRPVL_	ENSG00000112200|ENST00000370706|ZNF451;ENST00000444273.6_1_6:56954967-57015704:+|nuORF;nc|ENSG00000112200|Q9Y4E5-2|ZNF451;nc|ENSG00000112200|Q9Y4E5-4|ZNF451;ZNF451|p.K220Nfs*85|1|0.34|ENSG00000112200|chr6:57134823-57134823|A/-|frameshift_variant;ZNF451|p.L304Dfs*12|1|0.07|ENSG00000112200|chr6:57141999-57142000|TT/-|frameshift_variant;ZNF451|p.T701Nfs*2|1|0.1|ENSG00000112200|chr6:57148180-57148181|-/A|frameshift_variant	42.396135135203025	0.392153681582562	3				NaN	NaN	0	NaN	7143	4979	12123
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12125	35.829	NaN	4222.6	30	0	738.01	0.106	+			15738	GVSAATFLK	9	54	447.2584096689644	892.5022664047289	2	447.2576904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GVSAATFLK_	ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;nc|ENSG00000184110|Q99613-2|EIF3C	118.74307786436346	0.02196067127630568	3				NaN	NaN	0	NaN	7144	4979	12123
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12126	35.831	NaN	1689	30	0	154.63	0.106				-1	PAPGQAVPAML	11	65	534.2801960409405	1066.545839148681	2	534.2808227539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_PAPGQAVPAM(Oxidation (M))L_	ENST00000470980.1_1_2:11696764-11702842:+|nuORF	35.61828744233558	0.616184410043185	3				NaN	NaN	0	NaN	7145	4979	12123
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12127	35.833	NaN	2320.9	30	0	262.39	0.036			+	28149	NALMGEQALM	10	66	539.2555943846071	1076.496635836014	2	539.2573852539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NALMGEQALM_	REV__ENSG00000163930|ENST00000460680|BAP1	45.97224482568171	0.49411383603842696	3				NaN	NaN	0	NaN	7146	4979	12123
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12131	35.847	NaN	3563.3	30	0	336.47	0.214	+			15854	GYFGNPQKF	9	71	529.2590173374724	1056.5034817417447	2	529.2587280273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GYFGNPQKF_	ENSG00000053747|ENST00000313654|LAMA3;LAMA3|p.E2016Rfs*13|1|0.27|ENSG00000053747|chr18:23901164-23901164|G/-|frameshift_variant;LAMA3|p.T2580Hfs*68|1|0.55|ENSG00000053747|chr18:23915376-23915376|A/-|frameshift_variant;nc|ENSG00000053747|Q16787-1|LAMA3;nc|ENSG00000053747|Q16787-3|LAMA3;nc|ENSG00000053747|Q16787-4|LAMA3	106.41520541750704	0.03265588207292361	3				NaN	NaN	0	NaN	7147	4982	12130
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12132	35.851	NaN	2049.5	30	0	179.48	0.106	+			19118	IYLFFVSY	8	67	526.279509587814	1050.544466242428	2	526.28076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IYLFFVSY_	ENST00000399410.7_1_16:16236589-16236823:+|nuORF	37.028477286268924	0.6747514403204248	3				NaN	NaN	0	NaN	7148	4982	12130
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12133	35.853	NaN	1838.6	30	0	109.66	0.106	+			25515	LPSSLKLSN	9	55	479.78228808707235	957.5500232409447	2	479.7827453613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LPSSLKLSN_	ENSG00000144504|ENST00000401804|ANKMY1;nc|ENSG00000144504|Q9P2S6-4|ANKMY1;nc|ENSG00000144504|Q9P2S6|ANKMY1	30.317721548370564	0.5199124245378496	3				NaN	NaN	0	NaN	7149	4982	12130
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12134	35.855	NaN	2013.5	30	0	248.85	0.035			+	36627	SGGKAERAIR	10	60	522.8001289169958	1043.5857049007916	2	522.800537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SGGKAERAIR_	REV__ENST00000250937.7_1_19:3490986-3491331:-|nuORF	24.519189625965996	0.6795976720565101	3				NaN	NaN	0	NaN	7150	4982	12130
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12138	35.869	NaN	797.69	30	0	132.62	0.214				-1	 	0	31	371.22775801890646	370.22048155230647	1	371.2275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7151	4985	12137
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12139	35.872	NaN	3743.7	30	0	454.43	0.106	+			41411	SVMSTVEWNK	10	72	590.7875250473634	1179.5604971615267	2	590.7862548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVMSTVEWNK_	BZW1|p.S325Rfs*19|1|0.04|ENSG00000082153|chr2:200819989-200819990|-/ACAATATAGAA|frameshift_variant;ENSG00000082153|ENST00000409600|BZW1;nc|ENSG00000082153|Q7L1Q6-3|BZW1;nc|ENSG00000082153|Q7L1Q6-4|BZW1	66.96192283764107	0.30252237217063654	3				NaN	NaN	0	NaN	7152	4985	12137
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12140	35.874	NaN	1828.7	30	0	212.52	0.106	+			845	AEGPPRLAI	9	52	462.2692419656403	922.5239309980806	2	462.268310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEGPPRLAI_	ENSG00000089693|ENST00000203630|MLF2	56.72105179125745	0.24094814563026265	3				NaN	NaN	0	NaN	7153	4985	12137
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12141	35.876	NaN	2347.3	30	0	182.69	0.106			+	38601	SSGLLRLNY	9	63	511.78402243648804	NaN	0	511.7835998535156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSGLLRLNY_	REV__AluSc_dup26247|chr14:55143427-55143722:-|3.947558539677292|0.0255733500930304|7.27|477.0|17|3|anti-sense;REV__nc|ENSG00000215162|Q8N2A0|LINC00269	39.252832667884924	0.27938773122138094	3				NaN	NaN	0	NaN	7154	4985	12137
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12142	35.878	NaN	1700	30	0	152.22	0.106	+			12632	GEIIGVKV	8	44	407.75562205548624	813.4966911777725	2	407.7548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GEIIGVKV_	ENSG00000180817|ENST00000373232|PPA1	82.30502934623384	0.30436709589983096	3				NaN	NaN	0	NaN	7155	4985	12137
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12143	35.879	NaN	1841.1	30	0	170.55	0.106	+			35172	SAIFRSDSL	9	59	498.26100524637957	994.5074575595592	2	498.2624816894531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SAIFRSDSL_	ENSG00000180921|ENST00000388913|FAM83H	44.377184641726394	0.36891676396732553	3				NaN	NaN	0	NaN	7156	4985	12137
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12144	35.881	NaN	2769.7	30	0	506.53	0.034	+			26615	LVAALAEATV	10	52	479.2841592673994	NaN	0	479.2854309082031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LVAALAEATV_	ENST00000527128.5_1_9:100000750-100013832:+|nuORF	42.396135135203025	0.3536752194735987	3				NaN	NaN	0	NaN	7157	4985	12137
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12149	35.895	NaN	2767.2	30	0	854.08	0.214			+	-1	QNKGFMKKM	9	62	564.2909195665223	1126.5672861998446	2	564.2906494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_QNKGFMKKM(Oxidation (M))_	REV__ENSG00000181718|ENST00000641661|OR5T2;REV__nc|ENSG00000181718|Q8NGG2|OR5T2	45.9519527083369	0.35044536499095585	3				NaN	NaN	0	NaN	7159	4988	12148
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12150	35.899	NaN	2059.5	30	0	352.79	0.106	+			35894	SEFATTNQI	9	64	505.7438687354057	1009.4731845376115	2	505.7430725097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEFATTNQI_	ENSG00000149600|ENST00000278980|COMMD7;ENST00000610160.1_1_20:31291624-31315937:-|nuORF;nc|ENSG00000149600|Q86VX2-2|COMMD7	72.87924865735499	0.12833875048249987	3				NaN	NaN	0	NaN	7160	4988	12148
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12151	35.901	NaN	1378.8	30	0	246.68	0.106			+	-1	RTQPDCGLHDA	11	46	635.2836028818241	NaN	0	635.2832641601562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_RTQPDC(Carbamidomethyl (C))GLHDA_	REV__ENSG00000113269|ENST00000521389|RNF130;REV__nc|ENSG00000113269|Q86XS8-2|RNF130;REV__RNF130|p.K102Sfs*28|1|0.34|ENSG00000113269|chr5:180040587-180040590|TGTT/-|frameshift_variant	22.579656572578934	0.456735970842152	3				NaN	NaN	0	NaN	7161	4988	12148
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12152	35.903	NaN	1466.9	30	0	109.12	0.035			+	28633	NLAQSSRLK	9	51	508.7945251464844	NaN	0	508.7945251464844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NLAQSSRLK_	REV__ENSG00000165115|ENST00000297814|KIF27;REV__ENST00000422653.1_1_9:88371036-88385349:+|nuORF;REV__KIF27|p.K1223Tfs*2|1|0.11|ENSG00000165115|chr9:83842289-83842290|TT/-|frameshift_variant;REV__nc|ENSG00000165115|Q86VH2-2|KIF27	34.172542307311794	0.30503706118289736	3				NaN	NaN	0	NaN	7162	4988	12148
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12157	35.917	NaN	3201	30	0	271.36	0.215	+			51326	YSLVSREL	8	63	483.76675264654665	965.5189523598933	2	483.7669982910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YSLVSREL_	ENSG00000119777|ENST00000238788|TMEM214	62.107414245175825	0.4809183816468817	3				NaN	NaN	0	NaN	7164	4991	12156
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12158	35.92	NaN	1845.3	30	0	168.22	0.034			+	33329	RGSSWLLL	8	56	466.27172529087625	930.5288976485525	2	466.2713928222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RGSSWLLL_	REV__ENST00000316967.10_1_15:84869536-84871628:-|nuORF	31.954861631926434	0.7126016770032289	3				NaN	NaN	0	NaN	7165	4991	12156
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12162	35.934	NaN	4762.9	30	0	870.47	0.214	+			8701	EEAVLEEKV	9	63	523.274381316897	1044.534209700594	2	523.2754516601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EEAVLEEKV_	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;TTN|p.A12650Gfs*4|1|0.4|ENSG00000155657|chr2:178633489-178633490|-/T|frameshift_variant;TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;TTN|p.D20259Rfs*40|1|0.44|ENSG00000155657|chr2:178583105-178583106|-/T|frameshift_variant;TTN|p.D21555Ifs*6|1|0.33|ENSG00000155657|chr2:178576659-178576659|G/-|frameshift_variant;TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;TTN|p.E15132Sfs*22|1|0.27|ENSG00000155657|chr2:178612094-178612094|C/-|frameshift_variant;TTN|p.E20392Dfs*6|1|0.04|ENSG00000155657|chr2:178582357-178582358|-/TTTAAAATTA|frameshift_variant;TTN|p.E20392Kfs*4|1|0.02|ENSG00000155657|chr2:178582359-178582360|-/TTTT|frameshift_variant;TTN|p.F18705Lfs*8|1|0.37|ENSG00000155657|chr2:178590687-178590687|A/-|frameshift_variant;TTN|p.G12742Vfs*2|1|0.05|ENSG00000155657|chr2:178632983-178632983|C/-|frameshift_variant;TTN|p.G14712Dfs*11|1|0.37|ENSG00000155657|chr2:178614341-178614341|G/-|frameshift_variant;TTN|p.G19920Afs*12|1|0.42|ENSG00000155657|chr2:178584961-178584961|G/-|frameshift_variant;TTN|p.G22029Efs*22|2|0.13|ENSG00000155657|chr2:178575125-178575125|T/-|frameshift_variant;TTN|p.I24998Nfs*2|1|0.35|ENSG00000155657|chr2:178566216-178566217|-/T|frameshift_variant;TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;TTN|p.K11556Sfs*15|1|0.39|ENSG00000155657|chr2:178652287-178652287|T/-|frameshift_variant;TTN|p.K14271Qfs*5|1|0.02|ENSG00000155657|chr2:178617351-178617352|-/G|frameshift_variant;TTN|p.K26626Nfs*34|1|0.34|ENSG00000155657|chr2:178561331-178561331|T/-|frameshift_variant;TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant;TTN|p.N13487Tfs*49|1|0.34|ENSG00000155657|chr2:178621335-178621335|T/-|frameshift_variant;TTN|p.N15496Ifs*16|1|0.09|ENSG00000155657|chr2:178610116-178610116|T/-|frameshift_variant;TTN|p.P16126Rfs*3|1|0.25|ENSG00000155657|chr2:178607301-178607302|TG/-|frameshift_variant;TTN|p.P22810Hfs*10|1|0.03|ENSG00000155657|chr2:178572780-178572781|-/AAAT|frameshift_variant;TTN|p.V13823*|1|0.28|ENSG00000155657|chr2:178620027-178620027|C/-|frameshift_variant;TTN|p.V22573Cfs*4|2|0.31|ENSG00000155657|chr2:178573492-178573492|C/-|frameshift_variant;TTN|p.V27442Cfs*4|1|0.05|ENSG00000155657|chr2:178558107-178558108|-/A|frameshift_variant	49.44154591367651	0.3095138337212152	3				NaN	NaN	0	NaN	7166	4994	12161
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12163	35.938	NaN	3359.9	30	0	650.33	0.106	+			21778	KQTEATMTFK	10	64	592.801776480285	1183.5890000273698	2	592.8014526367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KQTEATMTFK_	APOB|p.A2932Pfs*19|1|0.36|ENSG00000084674|chr2:21008074-21008074|C/-|frameshift_variant;APOB|p.G1921Efs*13|1|0.19|ENSG00000084674|chr2:21011106-21011106|C/-|frameshift_variant;APOB|p.K4541Sfs*8|1|0.34|ENSG00000084674|chr2:21001800-21001800|T/-|frameshift_variant;APOB|p.M1189*|1|0.34|ENSG00000084674|chr2:21015204-21015204|T/-|frameshift_variant;APOB|p.S3866Yfs*21|1|0.06|ENSG00000084674|chr2:21005271-21005272|-/TAAGAAAT|frameshift_variant;APOB|p.Y2149Vfs*2|2|0.29|ENSG00000084674|chr2:21010424-21010425|-/T|frameshift_variant;ENSG00000084674|ENST00000233242|APOB	37.50817390946774	0.5721060100277453	3				NaN	NaN	0	NaN	7167	4994	12161
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12164	35.94	NaN	2153.2	30	0	125.32	0.036				-1	 	0	64	535.7620327267826	1069.5095125203652	2	535.763427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7168	4994	12161
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12172	35.958	NaN	2583.9	30	0	458.82	0.214				-1	ACVGTEAHL	9	63	479.22737583539976	956.4401987375995	2	479.2265930175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_AC(Carbamidomethyl (C))VGTEAHL_	ENSG00000115318|ENST00000264094|LOXL3	47.91560031466742	0.327412564698279	3				NaN	NaN	0	NaN	7173	4997	12171
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12173	35.962	NaN	1638.2	30	0	175.29	0.036			+	37807	SMISSVNVVR	10	51	546.2995360012806	NaN	0	546.2982788085938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SMISSVNVVR_	REV__ENSG00000159228|ENST00000290349|CBR1;REV__ENST00000530908.5_1_21:37444388-37445177:+|nuORF	37.50817390946774	0.3770175549877019	3				NaN	NaN	0	NaN	7174	4997	12171
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12177	35.976	NaN	5994.9	30	0	493.66	0.214			+	11995	FVTKGNASF	9	57	485.75358055010696	969.4926081670139	2	485.7529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FVTKGNASF_	REV__tr|U7STF7|U7STF7_FUSNUDUF1576domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01332PE=4SV=1	111.64827973302667	0.027316110422332632	3				NaN	NaN	0	NaN	7175	5000	12176
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12178	35.979	NaN	5278.1	30	0	1071.9	0.106			+	22503	KTPKLNEPI	9	59	520.311147718432	1038.607742503664	2	520.3108520507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTPKLNEPI_	REV__DCHS2|p.C2517Sfs*5|1|0.13|ENSG00000197410|chr4:154235737-154235737|C/-|frameshift_variant;REV__ENSG00000197410|ENST00000357232|DCHS2	52.936696900407355	0.27249468807391813	3				NaN	NaN	0	NaN	7176	5000	12176
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12179	35.981	NaN	2739.6	30	0	404.87	0.106	+			119	AAFDGGFTVK	10	62	506.7588254760114	1011.5030980188228	2	506.7583923339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AAFDGGFTVK_	ENSG00000102910|ENST00000285737|LONP2;ENST00000564259.1_1_16:48382051-48395504:+|nuORF;nc|ENSG00000102910|Q86WA8-2|LONP2	46.45678178249821	0.4896490706773647	3				NaN	NaN	0	NaN	7177	5000	12176
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12180	35.983	NaN	1435.9	30	0	193.6	0.035	+			30563	QALYGKKSP	9	56	496.28180178812937	990.5490506430588	2	496.2818298339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QALYGKKSP_	ENSG00000123342|ENST00000322569|MMP19;ENST00000547685.5_1_12:56231631-56233583:-|nuORF;ENST00000548882.5_1_12:56232267-56233517:-|nuORF;ENST00000552872.5_1_12:56231631-56234980:-|nuORF	39.252832667884924	0.4290233611298554	3				NaN	NaN	0	NaN	7178	5000	12176
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12185	35.997	NaN	2042.9	30	0	780.89	0.214			+	17535	IDQLEPIEA	9	59	514.2688404387701	1026.52312794434	2	514.2683715820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IDQLEPIEA_	REV__ENSG00000124496|ENST00000695948|TRERF1;REV__nc|ENSG00000124496|Q96PN7-2|TRERF1;REV__nc|ENSG00000124496|Q96PN7-3|TRERF1;REV__nc|ENSG00000124496|Q96PN7-4|TRERF1;REV__nc|ENSG00000124496|Q96PN7-5|TRERF1;REV__nc|ENSG00000124496|Q96PN7|TRERF1;REV__TRERF1|p.F853Rfs*6|2|0.34|ENSG00000124496|chr6:42256748-42256751|CAAA/-|frameshift_variant	47.657333605630114	0.33044192980041115	3				NaN	NaN	0	NaN	7180	5003	12184
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12186	36.001	NaN	1668.1	30	0	112.67	0.035	+			34915	SAAESFMKY	9	59	517.2368632170112	1032.4591735008223	2	517.2366333007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAAESFMKY_	ENSG00000007171|ENST00000313735|NOS2;nc|ENSG00000007171|P35228-2|NOS2;NOS2|p.A650Pfs*53|1|0.21|ENSG00000007171|chr17:27769063-27769063|C/-|frameshift_variant;NOS2|p.Y709*|1|0.33|ENSG00000007171|chr17:27767745-27767745|G/-|frameshift_variant	40.77816245573522	0.41113185337114944	3				NaN	NaN	0	NaN	7181	5003	12184
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12191	36.015	NaN	2226.6	30	0	243.76	0.214	+			4582	ATLGAILNR	9	51	464.78240345989764	927.5502539865953	2	464.7824401855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATLGAILNR_	ENSG00000156515|ENST00000359426|HK1;ENST00000494253.1_1_10:71098016-71144300:+|nuORF;HK1|p.R398H|1|0.04|ENSG00000156515|chr10:69380023-69380023|G/A|missense_variant;nc|ENSG00000156515|P19367-2|HK1;nc|ENSG00000156515|P19367-3|HK1;nc|ENSG00000156515|P19367-4|HK1	56.72105179125745	0.24094814563026265	3				NaN	NaN	0	NaN	7183	5006	12190
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12192	36.019	NaN	1081.9	30	0	103.63	0.035	+			351	AAQEKKFAV	9	56	496.28180178812937	990.5490506430588	2	496.2812194824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAQEKKFAV_	ENSG00000162669|ENST00000370425|HFM1;ENST00000462405.5_1_1:91728075-91813019:-|nuORF;HFM1|p.K1137Hfs*4|1|0.1|ENSG00000162669|chr1:91277045-91277046|-/ATTTAAAGTG|frameshift_variant;HFM1|p.K1137Nfs*44|1|0.18|ENSG00000162669|chr1:91277043-91277043|T/-|frameshift_variant;HFM1|p.N1388Tfs*37|1|0.26|ENSG00000162669|chr1:91262316-91262316|T/-|frameshift_variant;HFM1|p.V1397Sfs*6|1|0.31|ENSG00000162669|chr1:91262290-91262291|-/T|frameshift_variant;nc|ENSG00000162669|A2PYH4-2|HFM1	30.503639358989545	0.5181749237905803	3				NaN	NaN	0	NaN	7184	5006	12190
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12200	36.039	NaN	1434.6	30	0	178.92	0.214			+	37496	SLKYLEEG	8	53	469.74544590213156	937.4763388710631	2	469.7445068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLKYLEEG_	REV__ENSG00000167895|ENST00000318430|TMC8;REV__nc|ENSG00000167895|Q8IU68-2|TMC8;REV__TMC8|p.L494Pfs*7|1|0.38|ENSG00000167895|chr17:78138130-78138131|-/C|frameshift_variant	37.15910966729921	0.6739408393984688	3				NaN	NaN	0	NaN	7189	5009	12199
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12201	36.042	NaN	3519.4	30	0	769.63	0.038			+	13487	GLLREGSSHCK	11	63	593.8038109242938	1185.5930689153874	2	594.3052978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GLLREGSSHCK_	REV__ENST00000468626.2_1_1:235993700-235996928:-|nuORF	42.86426827375447	0.5187511139693657	3				NaN	NaN	0	NaN	7190	5009	12199
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12207	36.058	NaN	5502.5	30	0	474.07	0.214	+			38111	SPVSKGILQY	10	71	546.3083764598292	1090.6021999864583	2	546.30859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SPVSKGILQY_	ENSG00000167325|ENST00000300738|RRM1	96.66504779109242	0.09291513985748291	3				NaN	NaN	0	NaN	7193	5012	12206
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12208	36.062	NaN	3444.6	30	0	645.85	0.106	+			45359	TVTAQILLK	9	65	493.8163689689011	985.6181850046022	2	493.81573486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVTAQILLK_	ENSG00000178982|ENST00000248342|EIF3K;ENST00000514461.1_1_4:116964948-116965134:-|nuORF;ENST00000586932.5_1_19:39109833-39116793:+|nuORF;ENST00000593062.5_1_19:39109833-39121488:+|nuORF;nc|ENSG00000178982|Q9UBQ5-2|EIF3K	63.42647028704847	0.1850514934184437	3				NaN	NaN	0	NaN	7194	5012	12206
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12209	36.064	NaN	2822	30	0	363.59	0.106	+			24841	LIYVAGGLTK	10	56	517.8157742629896	1033.6169955927792	2	517.8154907226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LIYVAGGLTK_	ENSG00000114796|ENST00000242810|KLHL24;nc|ENSG00000114796|Q6TFL4-2|KLHL24	35.15202426646627	0.5927656479315102	3				NaN	NaN	0	NaN	7195	5012	12206
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12210	36.066	NaN	1746.7	30	0	233.96	0.106			+	48736	VTVEDGSFLT	10	63	534.2660167664036	1066.517480599607	2	534.26513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTVEDGSFLT_	REV__tr|U7T203|U7T203_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00417PE=4SV=1	39.252832667884924	0.5560298534376815	3				NaN	NaN	0	NaN	7196	5012	12206
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12211	36.067	NaN	1881.8	30	0	721.67	0.106	+			19028	IWVGPDNR	8	60	478.7501079815528	NaN	0	478.7503356933594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IWVGPDNR_	ENSG00000139211|ENST00000550413|AMIGO2	35.200714571348534	1.7418937515398478	3				NaN	NaN	0	NaN	7197	5012	12206
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12212	36.069	NaN	2765.2	30	0	685.92	0.106				-1	KMCLLWMK	8	64	555.2867984855683	1108.5590440379365	2	555.2867431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_KMC(Carbamidomethyl (C))LLWMK_	ENST00000394780.7_2_X:110956478-110961393:+|nuORF	50.0245360154114	0.5941082100236891	3				NaN	NaN	0	NaN	7198	5012	12206
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12213	36.071	NaN	834.18	30	0	183.28	0.036				-1	PIPRCPPCA	9	26	356.5082844781545	NaN	0	356.5081481933594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C)	_PIPRC(Carbamidomethyl (C))PPC(Carbamidomethyl (C))A_	ENST00000372980.3_1_20:42815966-42816209:-|nuORF	20.94693142431847	0.3660861156085067	3				NaN	NaN	0	NaN	7199	5012	12206
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12218	36.085	NaN	7194.6	30	0	4926.3	0.214				-1	 	0	62	559.9556857251491	1676.8452277756473	3	559.955322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7201	5015	12217
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12219	36.089	NaN	5625.5	30	0	454.24	0.106			+	685	AEAKVSVRL	9	68	486.7959316312132	971.5773103292264	2	486.7948303222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEAKVSVRL_	REV__ENSG00000074356|ENST00000389005|NCBP3	36.446750945000026	0.4619375763483977	3				NaN	NaN	0	NaN	7202	5015	12217
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12220	36.091	NaN	3160	30	0	321.3	0.106			+	17923	IGKGLNEKY	9	61	511.2877643776171	1020.5609758220343	2	511.2873229980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IGKGLNEKY_	REV__ENSG00000183091|ENST00000397345|NEB;REV__nc|ENSG00000183091|P20929-1|NEB;REV__nc|ENSG00000183091|P20929-3|NEB;REV__nc|ENSG00000183091|P20929-4|NEB	44.116797842482775	0.37197099687881774	3				NaN	NaN	0	NaN	7203	5015	12217
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12221	36.092	NaN	2673.6	30	0	545.36	0.106	+			39118	SSTMWTTLK	9	63	527.7656500565889	1053.5167471799778	2	527.765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSTMWTTLK_	ENST00000587750.5_1_17:76198611-76202102:+|nuORF;ENST00000589664.5_1_17:76200913-76202102:+|nuORF	49.536043120802724	0.308405419312776	3				NaN	NaN	0	NaN	7204	5015	12217
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12222	36.094	NaN	1804.7	30	0	205.73	0.106			+	31773	QPHPQLFS	8	53	477.2461727919579	952.4777926507159	2	477.2452697753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QPHPQLFS_	REV__ENSG00000197993|ENST00000355265|KEL	33.51558372728122	0.7005509609380386	3				NaN	NaN	0	NaN	7205	5015	12217
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12223	36.096	NaN	1226.4	30	0	70.493	0.106	+			40485	STYEQVDLIGK	11	59	626.8244029755829	NaN	0	626.8244018554688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STYEQVDLIGK_	ENSG00000165732|ENST00000354185|DDX21;nc|ENSG00000165732|Q9NR30-2|DDX21	42.33807565288922	0.3703495330385095	3				NaN	NaN	0	NaN	7206	5015	12217
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12224	36.098	NaN	1195	30	0	130.24	0.034	+			47705	VSFGESVLK	9	53	483.2690230779008	NaN	0	483.267822265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VSFGESVLK_	ENSG00000105856|ENST00000222574|HBP1;nc|ENSG00000105856|O60381-2|HBP1;nc|ENSG00000105856|O60381-3|HBP1	30.568863376406313	0.32323128698768616	3				NaN	NaN	0	NaN	7207	5015	12217
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12230	36.112	NaN	8100.2	30	0	1095.4	0.214	+			49608	VYGSFASKL	9	68	486.2639328021791	970.5133126711582	2	486.262939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYGSFASKL_	ENSG00000155096|ENST00000337198|AZIN1	106.68306549817024	0.032382560583716295	3				NaN	NaN	0	NaN	7210	5018	12229
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12231	36.116	NaN	2170.5	30	0	479.4	0.106	+			45569	TYMGHTGAVW	10	57	561.7562930661861	1121.4980331991721	2	561.7559814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TYMGHTGAVW_	ENSG00000084623|ENST00000677711|EIF3I;ENST00000474371.1_1_1:32688150-32694122:+|nuORF;ENST00000489353.5_1_1:32688042-32691823:+|nuORF	42.396135135203025	0.5270658956260207	3				NaN	NaN	0	NaN	7211	5018	12229
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12232	36.118	NaN	1931	30	0	148.45	0.106			+	18555	ISNLDVGGEY	10	61	533.7536120307184	NaN	0	533.7545166015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ISNLDVGGEY_	REV__ENSG00000035681|ENST00000038176|NSMAF;REV__nc|ENSG00000035681|Q92636-2|NSMAF;REV__NSMAF|p.R751Dfs*16|1|0.2|ENSG00000035681|chr8:58587662-58587662|T/-|frameshift_variant	49.44154591367651	0.30913310806145605	3				NaN	NaN	0	NaN	7212	5018	12229
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12233	36.12	NaN	880.63	30	0	149.14	0.106				-1	ASMKKVKSL	9	28	336.5342099218501	NaN	0	336.53466796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_ASM(Oxidation (M))KKVKSL_	ENST00000369426.9_1_1:119575536-119588262:-|nuORF	27.882242232435846	0.3367954786602879	3				NaN	NaN	0	NaN	7213	5018	12229
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12234	36.121	NaN	1632.5	30	0	93.956	0.106	+			5681	AVDVFQVAK	9	58	488.7765484465212	NaN	0	488.775634765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVDVFQVAK_	ENSG00000144724|ENST00000474889|PTPRG;ENST00000475012.5_1_3:62203523-62278979:+|nuORF;nc|ENSG00000144724|P23470-2|PTPRG	49.44154591367651	0.21054156626303966	3				NaN	NaN	0	NaN	7214	5018	12229
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12235	36.123	NaN	1472.8	30	0	158.65	0.106				-1	MKLCSLFKVK	10	62	606.8462820696672	1211.6780112061342	2	606.8453979492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_M(Oxidation (M))KLCSLFKVK_	tr|U7T498|U7T498_FUSNUATPaseAAA-typecoredomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00307PE=4SV=1	26.69291269510374	0.6618461711292317	3				NaN	NaN	0	NaN	7215	5018	12229
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12236	36.125	NaN	1757.9	30	0	188.68	0.037			+	11253	FILLLWLHP	9	64	576.3527221679688	NaN	0	576.3527221679688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FILLLWLHP_	REV__ENST00000557963.1_1_15:101421085-101421394:+|nuORF	29.841539824830324	0.32690339240668626	3				NaN	NaN	0	NaN	7216	5018	12229
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12240	36.139	NaN	1226.4	30	0	147.91	0.214	+			27100	MANGAVIHL	9	47	463.24960666081375	NaN	0	463.2498779296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MANGAVIHL_	ENSG00000099995|ENST00000215793|SF3A1;nc|ENSG00000099995|Q15459-2|SF3A1	57.81127852772723	0.15865383123342353	3				NaN	NaN	0	NaN	7217	5021	12239
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12241	36.143	NaN	1821	30	0	272.74	0.106	+			18798	ITSDAAYVIQ	10	60	540.7833276285122	1079.5521023238243	2	540.782958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ITSDAAYVIQ_	ENSG00000119285|ENST00000366582|HEATR1	40.77816245573522	0.5419747034533848	3				NaN	NaN	0	NaN	7218	5021	12239
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12242	36.144	NaN	1182.1	30	0	87.932	0.106	+			46668	VGGHAVFL	8	45	400.22713791717246	798.4397229011449	2	400.2265319824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VGGHAVFL_	tr|U7SLR0|U7SLR0_FUSNUTyrosinephenol-lyaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=tplPE=3SV=1	43.626045697637714	0.6338121648150432	3				NaN	NaN	0	NaN	7219	5021	12239
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12243	36.146	NaN	1100.4	30	0	162.59	0.106			+	22025	KSHEETLEDLA	11	57	636.3081305124643	1270.6017080917286	2	636.3084716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KSHEETLEDLA_	REV__NUMA1|p.N342D|1|0.31|ENSG00000137497|chr11:72017782-72017782|T/C|missense_variant	22.579656572578934	0.7529490144093228	3				NaN	NaN	0	NaN	7220	5021	12239
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12244	36.148	NaN	1596.9	30	0	124.64	0.106			+	28654	NLKVFSPYH	9	65	552.7977391484437	1103.5809253636874	2	552.799072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NLKVFSPYH_	REV__sp|F5HG95|US29_HCMVMUncharacterizedproteinUS29OS=Humancytomegalovirus(strainMerlin)OX=295027GN=US29PE=3SV=1;REV__sp|P09705|US29_HCMVAUncharacterizedproteinHHRF4OS=Humancytomegalovirus(strainAD169)OX=10360GN=US29PE=3SV=1	49.536043120802724	0.308405419312776	3				NaN	NaN	0	NaN	7221	5021	12239
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12245	36.15	NaN	1049	30	0	82.259	0.034			+	17442	IAVKKAEPS	9	50	471.78486638818083	NaN	0	471.7842712402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IAVKKAEPS_	REV__ADGRG7|p.V664Ffs*4|1|0.11|ENSG00000144820|chr3:100668952-100668952|A/-|frameshift_variant;REV__ENSG00000144820|ENST00000273352|ADGRG7	30.503639358989545	0.3235605894931338	3				NaN	NaN	0	NaN	7222	5021	12239
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12253	36.168	NaN	3004.2	30	0	682.97	0.214	+			43365	TGEAMLVIK	9	57	481.27377149639165	960.5329900595833	2	481.273193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TGEAMLVIK_	tr|U7T480|U7T480_FUSNUhistidinekinaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00375PE=4SV=1	77.31757898189308	0.1091473830098891	3				NaN	NaN	0	NaN	7227	5024	12252
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12254	36.172	NaN	3112.8	30	0	286.47	0.106			+	12350	GDLKDWINH	9	64	549.2726628387292	1096.5307727442582	2	549.2733154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GDLKDWINH_	REV__ENSG00000174915|ENST00000308020|PTDSS2;REV__ENST00000526878.5_1_11:460175-490579:+|nuORF	58.22992032128504	0.22837015374068087	3				NaN	NaN	0	NaN	7228	5024	12252
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12255	36.174	NaN	1954.6	30	0	101.42	0.106			+	2160	ALLLPQPKP	9	56	488.81370879242587	975.6128646516518	2	488.8128356933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ALLLPQPKP_	REV__ENST00000418045.5_3_2:201390872-201390965:+|nuORF	47.91560031466742	0.327412564698279	3				NaN	NaN	0	NaN	7229	5024	12252
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12256	36.175	NaN	2407	30	0	398.67	0.106	+			35273	SALSPWPGV	9	57	457.242830800824	912.471108668448	2	457.2428283691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SALSPWPGV_	ENST00000592951.5_1_17:75450102-75450240:+|nuORF	45.9519527083369	0.35044536499095585	3				NaN	NaN	0	NaN	7230	5024	12252
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12257	36.177	NaN	1475.3	30	0	191.16	0.106			+	32904	RDSTMVLIA	9	57	503.2749775718306	1004.5354022104613	2	503.27313232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RDSTMVLIA_	REV__tr|U7SQT1|U7SQT1_FUSNUATPsynthasegammachainOS=FusobacteriumnucleatumCTI-5OX=1316586GN=atpGPE=3SV=1	52.936696900407355	0.27249468807391813	3				NaN	NaN	0	NaN	7231	5024	12252
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12258	36.179	NaN	1060.3	30	0	103.14	0.035	+			51153	YPAQGPTPPA	10	56	499.7502274516515	NaN	0	499.750244140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YPAQGPTPPA_	ENST00000553080.1_1_16:715614-715659:+|nuORF	42.396135135203025	0.3536752194735987	3				NaN	NaN	0	NaN	7232	5024	12252
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12262	36.193	NaN	4489.9	30	0	661.6	0.214			+	2242	ALSVGSAQLLA	11	66	515.3009575564274	1028.5873621796547	2	515.3008422851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ALSVGSAQLLA_	REV__ENST00000479638.5_1_6:160211006-160211772:+|nuORF	37.50817390946774	0.5920388381045607	3				NaN	NaN	0	NaN	7233	5027	12261
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12263	36.196	NaN	2952.1	30	0	367.51	0.106	+			1446	AEYTAKIAL	9	60	490.277147630324	978.539742327448	2	490.2765197753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEYTAKIAL_	ENSG00000092820|ENST00000367075|EZR	49.536043120802724	0.308405419312776	3				NaN	NaN	0	NaN	7234	5027	12261
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12264	36.198	NaN	2160	30	0	282.37	0.034			+	42933	TEILKQTL	8	58	473.28507421663085	944.5555955000617	2	473.2842102050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TEILKQTL_	REV__ENSG00000090060|ENST00000216277|PAPOLA;REV__ENST00000554130.5_1_14:96968887-96993844:+|nuORF;REV__nc|ENSG00000090060|P51003-2|PAPOLA	68.78682469695295	0.41700713582915416	3				NaN	NaN	0	NaN	7235	5027	12261
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12269	36.212	NaN	7201.6	30	0	1906.1	0.214	+			17097	HSGPVIPVY	9	52	484.76407234584025	967.5135917584805	2	484.76348876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HSGPVIPVY_	ENSG00000114315|ENST00000232424|HES1	71.37791200682192	0.13483053934309522	3				NaN	NaN	0	NaN	7237	5030	12268
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12270	36.216	NaN	1700.8	30	0	159.33	0.033	+			47873	VSLGLVVSK	9	49	451.2897685899866	900.5649842467732	2	451.2896423339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSLGLVVSK_	ENSG00000185947|ENST00000300870|ZNF267;ENST00000566541.5_3_16:31886566-31901532:+|nuORF;ZNF267|p.L310Sfs*2|1|0.08|ENSG00000185947|chr16:31915175-31915176|-/T|frameshift_variant	37.81151784470057	0.4459294069877048	3				NaN	NaN	0	NaN	7238	5030	12268
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12275	36.23	NaN	3753.8	30	0	548.63	0.214	+			2355	AMYTYFQAK	9	69	561.7681376912116	1121.521722449223	2	561.7682495117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AMYTYFQAK_	ENSG00000116260|ENST00000367602|QSOX1	79.71258880314673	0.09879134589249085	3				NaN	NaN	0	NaN	7240	5033	12274
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12276	36.234	NaN	2331.9	30	0	817.68	0.106			+	-1	SMKRGDQLL	9	35	355.19083993419713	1062.5506904027914	3	355.1903991699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_SM(Oxidation (M))KRGDQLL_	REV__ENSG00000173227|ENST00000527043|SYT12;REV__SYT12|p.K337N|1|0.24|ENSG00000173227|chr11:67045796-67045796|G/T|missense_variant	27.882242232435846	0.5426732730940306	3				NaN	NaN	0	NaN	7241	5033	12274
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12277	36.236	NaN	1874.4	30	0	215.91	0.035	+			37570	SLMSSELAR	9	58	497.2541694738997	992.4937860145994	2	497.253662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLMSSELAR_	ENSG00000111206|ENST00000359843|FOXM1;ENST00000366362.3_1_12:2973410-2973858:-|nuORF;ENST00000536066.1_1_12:2967806-2973707:-|nuORF;FOXM1|p.E671Nfs*12|3|0.38|ENSG00000111206|chr12:2858922-2858922|G/-|frameshift_variant;FOXM1|p.P629Qfs*4|1|0.27|ENSG00000111206|chr12:2859044-2859044|G/-|frameshift_variant;nc|ENSG00000111206|Q08050-2|FOXM1;nc|ENSG00000111206|Q08050-3|FOXM1	45.97224482568171	0.3502073465782774	3				NaN	NaN	0	NaN	7242	5033	12274
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12281	36.25	NaN	1264.6	30	0	128.6	0.215	+			23534	LAIKPGTSV	9	48	443.2737080738568	NaN	0	443.2735900878906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LAIKPGTSV_	ENSG00000197713|ENST00000359429|RPE;ENSG00000235376|ENST00000441178|RPEL1;nc|ENSG00000197713|Q96AT9-2|RPE;nc|ENSG00000197713|Q96AT9-3|RPE;nc|ENSG00000197713|Q96AT9-4|RPE;nc|ENSG00000197713|Q96AT9-5|RPE	58.78195531508484	0.1545138866451181	3				NaN	NaN	0	NaN	7243	5036	12280
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12282	36.253	NaN	1989.4	30	0	203.05	0.106			+	27233	MELAAKER	8	60	474.25313307524834	946.4917132172967	2	474.2516784667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MELAAKER_	REV__ENSG00000226321|ENST00000690015|CROCC2	58.78195531508484	0.5138399468736706	3				NaN	NaN	0	NaN	7244	5036	12280
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12283	36.255	NaN	1087.7	30	0	125.49	0.034	+			25435	LPNSPGSTF	9	49	460.2295336010475	NaN	0	460.22906494140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LPNSPGSTF_	COL17A1|p.E391Kfs*12|1|0.43|ENSG00000065618|chr10:104059690-104059690|T/-|frameshift_variant;COL17A1|p.P1229Rfs*22|1|0.39|ENSG00000065618|chr10:104034701-104034701|G/-|frameshift_variant;COL17A1|p.P847Qfs*219|1|0.17|ENSG00000065618|chr10:104042431-104042431|G/-|frameshift_variant;ENSG00000065618|ENST00000648076|COL17A1;ENST00000483876.1_1_10:105833772-105837213:-|nuORF;nc|ENSG00000065618|Q9UMD9-2|COL17A1	30.317721548370564	0.32449924987115025	3				NaN	NaN	0	NaN	7245	5036	12280
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12288	36.27	NaN	2113	30	0	266.4	0.214	+			29454	PCLSLCLSLP	10	57	523.274381316897	1044.534209700594	2	523.2753295898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PCLSLCLSLP_	ENST00000606025.5_3_2:71168962-71169430:-|nuORF	27.882242232435846	0.6521336255503853	3				NaN	NaN	0	NaN	7247	5039	12287
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12289	36.273	NaN	1642.3	30	0	106.21	0.106	+			34595	RVMPPPWL	8	58	498.2803163634101	994.5460797936203	2	498.2792053222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RVMPPPWL_	PARK2|p.V330Rfs*17|1|0.31|ENSG00000185345|chr6:161548950-161548951|-/C|frameshift_variant	54.76467175910256	0.5536104764165384	3				NaN	NaN	0	NaN	7248	5039	12287
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12290	36.275	NaN	2449.6	30	0	144.61	0.036			+	50192	WLPYWVTV	8	66	532.2820434570312	NaN	0	532.2820434570312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_WLPYWVTV_	REV__ENSG00000156738|ENST00000345732|MS4A1;REV__ENST00000534503.5_1_11:60223398-60231282:+|nuORF	39.021493756699265	1.7418937515398478	3				NaN	NaN	0	NaN	7249	5039	12287
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12296	36.29	NaN	1717.6	30	0	118.69	0.142			+	18065	IKCWGLVL	8	51	466.2763880162243	930.5382230992486	2	466.2763366699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IKCWGLVL_	REV__ENST00000525154.1_1_11:9779377-9779509:-|nuORF	35.200714571348534	0.6875396545722289	3				NaN	NaN	0	NaN	7252	5042	12295
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12303	36.308	NaN	1487.4	30	0	144.39	0.214			+	7088	CVQTNPTL	8	46	438.21848843576373	874.4224239383275	2	438.2181701660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CVQTNPTL_	REV__ENST00000370071.6_1_1:107690813-107690984:+|nuORF	54.776311868738084	0.5534952410049249	3				NaN	NaN	0	NaN	7256	5045	12302
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12304	36.311	NaN	2199.1	30	0	152.69	0.106	+			51373	YTITPNGRF	9	69	534.7787575661	1067.542962199	2	534.77734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YTITPNGRF_	UBE2J2|p.M80T|1|0.34|ENSG00000160087|chr1:1257244-1257244|A/G|missense_variant	32.81241826257853	0.4965981579233955	3				NaN	NaN	0	NaN	7257	5045	12302
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12305	36.313	NaN	1905.8	30	0	173.39	0.035			+	14265	GSTLGLGLSLP	11	60	507.7962832340593	1013.5780135349186	2	507.7946472167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GSTLGLGLSLP_	REV__ENST00000496704.1_1_2:130899553-130900555:-|nuORF	31.529811441608018	0.6590691889962369	3				NaN	NaN	0	NaN	7258	5045	12302
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12309	36.327	NaN	2563.8	30	0	272.84	0.214	+			17625	IEIYVQKV	8	64	496.29552455469934	990.5764961761987	2	496.295654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IEIYVQKV_	CLTC|p.A1374*|1|0.05|ENSG00000141367|chr17:59683464-59683465|-/TA|frameshift_variant;CLTCL1|p.H915Ifs*56|1|0.35|ENSG00000070371|chr22:19221430-19221430|G/-|frameshift_variant;ENSG00000070371|ENST00000427926|CLTCL1;ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000070371|P53675-2|CLTCL1;nc|ENSG00000141367|Q00610-2|CLTC	74.25504064058377	0.37144338840759816	3				NaN	NaN	0	NaN	7259	5048	12308
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12310	36.331	NaN	1550.9	30	0	146.61	0.106	+			654	AEAEKVLAL	9	49	472.2771242969091	942.5396956606182	2	472.2769775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEAEKVLAL_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	67.49366992349736	0.1516260258713357	3				NaN	NaN	0	NaN	7260	5048	12308
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12311	36.333	NaN	2154.8	30	0	257.67	0.106	+			1125	AELQEVVKV	9	62	507.7962832340593	1013.5780135349186	2	507.7967834472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AELQEVVKV_	CDC5L|p.Q359Cfs*22|1|0.06|ENSG00000096401|chr6:44408614-44408615|-/TG|frameshift_variant;ENSG00000096401|ENST00000371477|CDC5L	53.08895987439943	0.27122541748218487	3				NaN	NaN	0	NaN	7261	5048	12308
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12312	36.335	NaN	1271.9	30	0	198.46	0.106	+			21260	KLLPENNVL	9	52	520.311147718432	1038.607742503664	2	520.3118286132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KLLPENNVL_	ENSG00000141510|ENST00000269305|TP53;nc|ENSG00000141510|P04637-2|TP53;nc|ENSG00000141510|P04637-3|TP53;TP53|p.C124Afs*46|1|0.51|ENSG00000141510|chr17:7675999-7675999|A/-|frameshift_variant;TP53|p.C229Yfs*10|1|0.59|ENSG00000141510|chr17:7674276-7674277|AC/-|frameshift_variant;TP53|p.C242Afs*5|1|0.54|ENSG00000141510|chr17:7674240-7674240|G/-|frameshift_variant;TP53|p.E198Gfs*11|1|0.43|ENSG00000141510|chr17:7674938-7674939|-/C|frameshift_variant;TP53|p.E336Sfs*9|1|0.15|ENSG00000141510|chr17:7670704-7670704|A/-|frameshift_variant;TP53|p.G302Rfs*4|1|0.13|ENSG00000141510|chr17:7673717-7673718|-/G|frameshift_variant;TP53|p.H178Tfs*69|1|0.68|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant;TP53|p.I195Nfs*14|1|0.81|ENSG00000141510|chr17:7674947-7674948|-/T|frameshift_variant;TP53|p.L35Ffs*8|1|0.64|ENSG00000141510|chr17:7676264-7676265|-/A|frameshift_variant;TP53|p.P151Rfs*27|1|0.46|ENSG00000141510|chr17:7675153-7675160|GGGCGGGG/-|frameshift_variant;TP53|p.P153Afs*28|1|0.62|ENSG00000141510|chr17:7675156-7675157|-/G|frameshift_variant;TP53|p.P301Qfs*44|1|0.5|ENSG00000141510|chr17:7673718-7673718|G/-|frameshift_variant;TP53|p.P322Hfs*23|1|0.53|ENSG00000141510|chr17:7673563-7673563|G/-|frameshift_variant;TP53|p.P60Qfs*63|1|0.38|ENSG00000141510|chr17:7676190-7676190|G/-|frameshift_variant;TP53|p.Q331Sfs*6|1|0.66|ENSG00000141510|chr17:7673537-7673538|-/A|frameshift_variant;TP53|p.Q38Kfs*6|1|0.56|ENSG00000141510|chr17:7676257-7676257|G/-|frameshift_variant;TP53|p.R280Kfs*59|1|0.41|ENSG00000141510|chr17:7673763-7673781|TCCTCTGTGCGCCGGTCTC/-|frameshift_variant;TP53|p.R290Kfs*53|1|0.62|ENSG00000141510|chr17:7673747-7673753|CTTGCGG/-|frameshift_variant;TP53|p.R335Lfs*10|1|0.74|ENSG00000141510|chr17:7670705-7670705|C/-|frameshift_variant;TP53|p.V73Wfs*50|1|0.78|ENSG00000141510|chr17:7676153-7676153|G/-|frameshift_variant	25.57405402267927	0.5642445186134241	3				NaN	NaN	0	NaN	7262	5048	12308
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12313	36.336	NaN	931.3	30	0	81.085	0.035	+			7970	DSTLGSSKET	10	53	512.7415320516712	NaN	0	512.7420043945312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DSTLGSSKET_	ENSG00000184507|ENST00000537011|NUTM1;nc|ENSG00000184507|Q86Y26-3|NUTM1;nc|ENSG00000184507|Q86Y26|NUTM1;NUTM1|p.Q931Kfs*53|1|0.37|ENSG00000184507|chr15:34356879-34356879|C/-|frameshift_variant	25.57405402267927	0.4162033004763879	3				NaN	NaN	0	NaN	7263	5048	12308
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12318	36.351	NaN	9022.4	30	0	1690.1	0.215				-1	 	0	64	532.2647080288037	1062.5148631244074	2	532.2647705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7265	5051	12317
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12319	36.354	NaN	2154.3	30	0	247.58	0.035	+			46187	VDWLTEKM	8	59	519.2534011764064	1036.4922494196128	2	519.2530517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_VDWLTEKM(Oxidation (M))_	ENSG00000141543|ENST00000649764|EIF4A3;ENSG00000156976|ENST00000323963|EIF4A2;ENSG00000161960|ENST00000293831|EIF4A1;ENST00000429589.5_1_3:186502413-186505273:+|nuORF;ENST00000468362.5_1_3:186503755-186505556:+|nuORF;ENST00000475653.5_1_3:186502413-186505086:+|nuORF;ENST00000492144.5_1_3:186503809-186505672:+|nuORF;ENST00000497177.1_1_3:186504924-186505672:+|nuORF;ENST00000575978.1_1_17:78111144-78112096:-|nuORF;ENST00000578324.5_1_17:7477602-7481249:+|nuORF;ENST00000581544.5_1_17:7477924-7481249:+|nuORF;ENST00000581621.1_1_17:7476159-7481249:+|nuORF;nc|ENSG00000156976|Q14240-2|EIF4A2;nc|ENSG00000161960|P60842-2|EIF4A1	58.22992032128504	0.519305013932957	3				NaN	NaN	0	NaN	7266	5051	12317
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12325	36.37	NaN	3884.3	30	0	651.31	0.214	+			51093	YLSEGLVTK	9	60	505.2822496441977	1008.5499463551954	2	505.2819519042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YLSEGLVTK_	ENSG00000141639|ENST00000400384|MAPK4	69.6276240434122	0.14239879520340665	3				NaN	NaN	0	NaN	7269	5054	12324
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12326	36.374	NaN	3242.1	30	0	276.58	0.106	+			35515	SAVDVHINM	9	61	493.2426485429673	984.4707441527346	2	493.2421569824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAVDVHINM_	ENSG00000204463|ENST00000676615|BAG6;nc|ENSG00000204463|P46379-2|BAG6;nc|ENSG00000204463|P46379-4|BAG6;nc|ENSG00000204463|P46379-5|BAG6;nc|ENSG00000204463|P46379|BAG6	65.46538089061403	0.16805504838372562	3				NaN	NaN	0	NaN	7270	5054	12324
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12327	36.376	NaN	1301.8	30	0	175.27	0.035	+			24220	LERVAIDAL	9	51	500.29541303832315	998.5762731434463	2	500.2957458496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LERVAIDAL_	ENSG00000024526|ENST00000456315|DEPDC1;ENST00000488146.5_1_1:68942617-68947320:-|nuORF;ENST00000559530.1_1_15:32058089-32058740:-|nuORF;nc|ENSG00000024526|Q5TB30-2|DEPDC1	37.81151784470057	0.4459294069877048	3				NaN	NaN	0	NaN	7271	5054	12324
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12331	36.39	NaN	3989.7	30	0	352.86	0.144	+			45541	TYKVISNEF	9	66	550.7849911840916	1099.5554294349831	2	550.7852172851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TYKVISNEF_	ENSG00000114062|ENST00000648336|UBE3A;ENST00000429033.1_1_21:32434669-32435362:-|nuORF;nc|ENSG00000114062|Q05086-2|UBE3A;nc|ENSG00000114062|Q05086|UBE3A	114.85826248499774	0.024312442104607014	3				NaN	NaN	0	NaN	7272	5057	12330
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12340	36.423	NaN	2749.9	30	0	433.24	0.214	+			28133	NAIVIHEVY	9	66	529.2873773769021	1056.560201820604	2	529.2869873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAIVIHEVY_	ENSG00000132849|ENST00000642238|PATJ;ENST00000484562.5_1_1:62228564-62579919:+|nuORF;nc|ENSG00000132849|Q8NI35-2|PATJ;nc|ENSG00000132849|Q8NI35-3|PATJ;nc|ENSG00000132849|Q8NI35-5|PATJ;nc|ENSG00000132849|Q8NI35|PATJ	69.6276240434122	0.14239879520340665	3				NaN	NaN	0	NaN	7275	5063	12339
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12341	36.427	NaN	2831.8	30	0	164.42	0.034	+			45812	VAIIARTDL	9	59	486.2983951074637	970.5822372817274	2	486.2984924316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VAIIARTDL_	ENSG00000106348|ENST00000338791|IMPDH1;ENSG00000178035|ENST00000326739|IMPDH2;ENST00000469328.5_1_7:128033063-128040541:-|nuORF;ENST00000484496.5_1_7:128032984-128040541:-|nuORF;IMPDH1|p.A247Gfs*7|1|0.06|ENSG00000106348|chr7:128398490-128398491|-/C|frameshift_variant;nc|ENSG00000106348|P20839-2|IMPDH1;nc|ENSG00000106348|P20839-3|IMPDH1;nc|ENSG00000106348|P20839-4|IMPDH1;nc|ENSG00000106348|P20839-5|IMPDH1;nc|ENSG00000106348|P20839-7|IMPDH1;nc|ENSG00000106348|P20839|IMPDH1	58.22992032128504	0.22837015374068087	3				NaN	NaN	0	NaN	7276	5063	12339
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12346	36.441	NaN	2202.9	30	0	343.48	0.214	+			11269	FISAGNKVY	9	55	499.7695249945388	997.5244970558776	2	499.7691345214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FISAGNKVY_	ENSG00000104237|ENST00000220676|RP1	71.29570347882199	0.13518600952103718	3				NaN	NaN	0	NaN	7278	5066	12345
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12347	36.445	NaN	1246.9	30	0	314.61	0.033	+			9104	EGKPGVGGF	9	40	424.21937707507107	846.4242012169422	2	424.2185363769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EGKPGVGGF_	ENSG00000139514|ENST00000380752|SLC7A1;SLC7A1|p.Q436Sfs*15|1|0.07|ENSG00000139514|chr13:29517777-29517777|G/-|frameshift_variant	35.61828744233558	0.47037581924408073	3				NaN	NaN	0	NaN	7279	5066	12345
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12352	36.459	NaN	4758.5	30	0	684.21	0.214	+			47266	VMSQALKATF	10	73	548.2972026163978	1094.5798522995956	2	548.2979736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VMSQALKATF_	ENSG00000157557|ENST00000360938|ETS2	80.91624569148213	0.18813531420570515	3				NaN	NaN	0	NaN	7281	5069	12351
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12353	36.462	NaN	4568.5	30	0	514.72	0.106	+			16423	HESAVTGLSL	10	64	507.2672980028317	1012.5200430724634	2	507.2666931152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HESAVTGLSL_	ENSG00000110107|ENST00000227524|PRPF19;PRPF19|p.S440Hfs*2|1|0.3|ENSG00000110107|chr11:60897945-60897945|A/-|frameshift_variant	71.87747018426188	0.26198133118427214	3				NaN	NaN	0	NaN	7282	5069	12351
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12354	36.464	NaN	3928.5	30	0	325.42	0.106	+			44629	TTFLLPGQK	9	65	502.79328423424545	1003.5720155352909	2	502.7922058105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TTFLLPGQK_	ENSG00000074964|ENST00000361221|ARHGEF10L;ENST00000469726.5_1_1:17942561-18023872:+|nuORF;nc|ENSG00000074964|Q9HCE6-2|ARHGEF10L;nc|ENSG00000074964|Q9HCE6-3|ARHGEF10L;nc|ENSG00000074964|Q9HCE6-4|ARHGEF10L	58.78195531508484	0.22376836668196862	3				NaN	NaN	0	NaN	7283	5069	12351
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12355	36.466	NaN	2198.9	30	0	172.53	0.035	+			51299	YSDDIPHAL	9	64	515.7458489393318	1029.4771449454636	2	515.7465209960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YSDDIPHAL_	ENSG00000104408|ENST00000220849|EIF3E;ENST00000518442.5_1_8:109247181-109261015:-|nuORF	97.47269410471826	0.04379738608259218	3				NaN	NaN	0	NaN	7284	5069	12351
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12360	36.48	NaN	1939.1	30	0	179.72	0.214	+			19183	IYTNHLYVY	9	68	593.2991685423477	1184.5837841514954	2	593.2975463867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IYTNHLYVY_	DOCK9|p.N1450Mfs*6|1|0.28|ENSG00000088387|chr13:98831683-98831683|T/-|frameshift_variant;DOCK9|p.T1335Yfs*4|2|0.43|ENSG00000088387|chr13:98850057-98850058|-/A|frameshift_variant;ENSG00000088387|ENST00000682017|DOCK9;nc|ENSG00000088387|Q9BZ29-3|DOCK9;nc|ENSG00000088387|Q9BZ29-4|DOCK9;nc|ENSG00000088387|Q9BZ29-5|DOCK9;nc|ENSG00000088387|Q9BZ29-6|DOCK9;nc|ENSG00000088387|Q9BZ29|DOCK9	55.50420428727701	0.2510918378945873	3				NaN	NaN	0	NaN	7286	5072	12359
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12361	36.484	NaN	1346.9	30	0	111.62	0.034			+	46845	VIFPLHIV	8	50	469.2986755371094	NaN	0	469.2986755371094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VIFPLHIV_	REV__ENST00000453595.1_1_X:36980271-36981156:-|nuORF	24.504012794735996	1.7418937515398478	3				NaN	NaN	0	NaN	7287	5072	12359
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12369	36.514	NaN	2218.3	30	0	217.9	0.214	+			11757	FSIRTYTY	8	62	525.7663181812786	1049.5180834293571	2	525.7662963867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FSIRTYTY_	ENSG00000177628|ENST00000368373|GBA1;ENST00000459805.5_1_1:155186646-155187358:-|nuORF;ENST00000460156.1_1_1:155207923-155208412:-|nuORF;ENST00000486197.5_1_1:155184905-155187358:-|nuORF;ENST00000566701.5_1_1:155184905-155187601:-|nuORF;nc|ENSG00000177628|P04062-2|GBA1;nc|ENSG00000177628|P04062-3|GBA1;nc|ENSG00000177628|P04062-4|GBA1;nc|ENSG00000177628|P04062-5|GBA1	40.77816245573522	0.6514838689002179	3				NaN	NaN	0	NaN	7289	5078	12368
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12370	36.517	NaN	3035.8	30	0	308.46	0.035	+			14297	GSWASLVQK	9	60	488.2673263251475	974.520099717095	2	488.7672119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSWASLVQK_	BRD4|p.P1210L|1|0.19|ENSG00000141867|chr19:15239212-15239212|G/A|missense_variant;ENSG00000141867|ENST00000679869|BRD4	44.377184641726394	0.36891676396732553	3				NaN	NaN	0	NaN	7290	5078	12368
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12382	36.563	NaN	5515.7	30	0	785.58	0.214	+			1035	AEKLITQTF	9	68	525.7953755050058	1049.5761980768116	2	525.7962646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEKLITQTF_	ENSG00000090273|ENST00000321265|NUDC	114.85826248499774	0.024312442104607014	3				NaN	NaN	0	NaN	7293	5087	12381
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12383	36.567	NaN	1824.4	30	0	258.99	0.036	+			51169	YPEPADRTM	9	57	540.2452955805811	1078.4760382279621	2	540.2459716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YPEPADRTM_	ENST00000489096.5_1_4:26861565-26861598:-|nuORF	24.519189625965996	0.574102787014149	3				NaN	NaN	0	NaN	7294	5087	12381
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12387	36.581	NaN	4417.4	30	0	918.51	0.214	+			14489	GTCLFVAVK	9	68	497.7736656178076	993.5327783024152	2	497.7735900878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GTC(Carbamidomethyl (C))LFVAVK_	ENSG00000198752|ENST00000361246|CDC42BPB	98.62937762414208	0.04060045538121712	3				NaN	NaN	0	NaN	7295	5090	12386
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12388	36.584	NaN	4477.1	30	0	577.58	0.106	+			17853	IFRHDLSW	8	63	537.2801403624246	1072.5457277916491	2	537.2805786132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IFRHDLSW_	SI|p.R248I|2|0.2|ENSG00000090402|chr3:165065325-165065325|C/A|missense_variant	60.97194046774394	0.49215940876911696	3				NaN	NaN	0	NaN	7296	5090	12386
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12389	36.586	NaN	4149.4	30	0	372.49	0.106	+			34765	RYGLVTNEI	9	64	532.7910412913199	1063.5675296494396	2	532.7915649414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RYGLVTNEI_	ENSG00000115267|ENST00000649979|IFIH1;IFIH1|p.E827Dfs*5|1|0.04|ENSG00000115267|chr2:162272361-162272362|-/ATAAGGTATTG|frameshift_variant	56.43379154798735	0.2433427591689151	3				NaN	NaN	0	NaN	7297	5090	12386
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12390	36.588	NaN	1820.6	30	0	157.6	0.037	+			11158	FGLYFLVVAL	10	57	571.3382689847193	1140.6619850362385	2	571.3385620117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FGLYFLVVAL_	ENSG00000278195|ENST00000610913|SSTR3	26.79610172149135	0.6610034878437611	3				NaN	NaN	0	NaN	7298	5090	12386
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12399	36.62	NaN	734.51	30	0	72.767	0.214			+	29206	NVPDLQSI	8	40	443.237136899591	NaN	0	443.23712158203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NVPDLQSI_	REV__ENSG00000135829|ENST00000367549|DHX9;REV__ENST00000485081.5_1_1:182847108-182856566:+|nuORF;REV__nc|ENSG00000135829|Q08211-2|DHX9	25.57405402267927	1.7418937515398478	3				NaN	NaN	0	NaN	7301	5096	12398
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12400	36.623	NaN	3546.9	30	0	1929	0.106				-1	 	0	59	489.2747374324488	976.5349219316976	2	489.2730712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7302	5096	12398
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12401	36.625	NaN	814.69	30	0	81.606	0.106	+			25167	LLVLPPTLGTP	11	31	374.2372131347656	NaN	0	374.2372131347656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LLVLPPTLGTP_	ENST00000524819.5_1_11:62529062-62529592:+|nuORF	18.531049691330335	0.456735970842152	3				NaN	NaN	0	NaN	7303	5096	12398
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12402	36.627	NaN	1404.8	30	0	107.46	0.106	+			45603	TYPDVNNSI	9	54	511.74349247139645	1021.4724320095929	2	511.74322509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TYPDVNNSI_	ENSG00000122958|ENST00000263559|VPS26A;nc|ENSG00000122958|O75436-2|VPS26A	49.536043120802724	0.308405419312776	3				NaN	NaN	0	NaN	7304	5096	12398
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12403	36.629	NaN	959.23	30	0	147.36	0.106	+			7349	DCIIRGDL	8	38	452.72969517917966	903.4448374251593	2	452.72857666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DCIIRGDL_	ENSG00000166847|ENST00000300087|DCTN5;nc|ENSG00000166847|Q9BTE1-2|DCTN5	42.396135135203025	0.6414440140393314	3				NaN	NaN	0	NaN	7305	5096	12398
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12404	36.63	NaN	1372.9	30	0	103.05	0.033	+			23424	LACGVAKVL	9	47	437.26524892976596	872.5159449263319	2	437.263916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LACGVAKVL_	ENSG00000265972|ENST00000582401|TXNIP	55.50420428727701	0.2510918378945873	3				NaN	NaN	0	NaN	7306	5096	12398
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12410	36.646	NaN	1924.3	30	0	117.97	0.214	+			36442	SEVELMKV	8	56	467.74967546485533	933.4847979965107	2	467.7491455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEVELMKV_	ENSG00000115758|ENST00000234111|ODC1	47.657333605630114	0.6087971902037268	3				NaN	NaN	0	NaN	7309	5099	12409
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12411	36.65	NaN	2219.3	30	0	373.21	0.034				-1	 	0	42	476.2383707911538	950.4621886491076	2	476.2370910644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7310	5099	12409
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12417	36.666	NaN	2729.3	30	0	201.19	0.214			+	7670	DLDGSFLMIM	10	65	571.2693061853261	1140.524059437452	2	571.2691650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DLDGSFLMIM_	REV__ENSG00000151012|ENST00000280612|SLC7A11	42.396135135203025	0.5270658956260207	3				NaN	NaN	0	NaN	7313	5102	12416
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12418	36.669	NaN	2689.9	30	0	290.94	0.106	+			45534	TYITSVSRL	9	63	520.292655849225	1038.5707587652498	2	520.2926635742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TYITSVSRL_	ENSG00000164823|ENST00000451899|OSGIN2;nc|ENSG00000164823|Q9Y236|OSGIN2	49.536043120802724	0.308405419312776	3				NaN	NaN	0	NaN	7314	5102	12416
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12419	36.671	NaN	1955.7	30	0	190.13	0.106			+	6783	CFIYHIKR	8	59	540.2956608412004	1078.5767687492007	2	540.2958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_CFIYHIKR_	REV__ENSG00000184166|ENST00000641833|OR1D2	54.76467175910256	0.5536104764165384	3				NaN	NaN	0	NaN	7315	5102	12416
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12420	36.673	NaN	1057.3	30	0	198.06	0.032	+			17463	ICKGGKTL	8	39	410.23977526053994	NaN	0	410.23980712890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ICKGGKTL_	ENST00000456936.3_1_5:114951687-114951792:-|nuORF	33.51558372728122	1.7418937515398478	3				NaN	NaN	0	NaN	7316	5102	12416
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12429	36.703	NaN	1757.9	30	0	245.17	0.143	+			44230	TRRPQSIK	8	57	493.30036100468095	984.5861690761619	2	493.2991027832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TRRPQSIK_	ENST00000257336.5_1_13:103459816-103460068:+|nuORF	37.81151784470057	0.6698925118251505	3				NaN	NaN	0	NaN	7319	5108	12428
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12434	36.719	NaN	3115.5	30	0	311.23	0.214	+			8381	EAMRIGAEVY	10	66	569.7820404111043	1137.5495278890085	2	569.7816162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EAMRIGAEVY_	ENO1|p.D318Mfs*5|1|0.43|ENSG00000074800|chr1:8864006-8864006|C/-|frameshift_variant;ENO3|p.V367*|1|0.39|ENSG00000108515|chr17:4956599-4956599|G/-|frameshift_variant;ENSG00000074800|ENST00000234590|ENO1;ENSG00000108515|ENST00000519602|ENO3;ENST00000464920.1_1_1:8921421-8930582:-|nuORF;ENST00000521659.5_2_17:4855435-4858958:+|nuORF;nc|ENSG00000074800|P06733-2|ENO1;nc|ENSG00000108515|P13929-2|ENO3;nc|ENSG00000108515|P13929-3|ENO3	95.81516180277367	0.09778090853194907	3				NaN	NaN	0	NaN	7321	5111	12433
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12435	36.723	NaN	1782.2	30	0	122.11	0.106	+			46946	VKAITYSAMQ	10	60	556.293317432422	NaN	0	556.2931518554688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VKAITYSAMQ_	ENSG00000176261|ENST00000468695|ZBTB8OS	42.86426827375447	0.3507156137006061	3				NaN	NaN	0	NaN	7322	5111	12433
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12436	36.725	NaN	1794	30	0	328.06	0.035			+	-1	LSCLIQSW	8	56	503.7532352717775	1005.491917610355	2	503.7537841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LSC(Carbamidomethyl (C))LIQSW_	REV__ENST00000481728.2_1_8:25209198-25222229:+|nuORF	37.15910966729921	0.6739408393984688	3				NaN	NaN	0	NaN	7323	5111	12433
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12446	36.757	NaN	2908.2	30	0	586.63	0.143	+			41683	SVSDIIVVAK	10	65	515.811472543808	1029.608392154416	2	515.8108520507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSDIIVVAK_	ENSG00000006042|ENST00000579849|TMEM98;ENST00000583120.1_1_17:31258522-31263466:+|nuORF	75.65223720490533	0.23114180991572172	3				NaN	NaN	0	NaN	7327	5117	12445
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12452	36.774	NaN	2053.8	30	0	475.52	0.214	+			46497	VETVYTHVL	9	57	530.7878864058854	1059.5612198785707	2	530.7880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VETVYTHVL_	ENSG00000163902|ENST00000296255|RPN1	53.351449002276354	0.2690372970092375	3				NaN	NaN	0	NaN	7330	5120	12451
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12453	36.778	NaN	1179.3	30	0	99.849	0.106			+	25333	LPDRDPGRE	9	57	527.7691040039062	NaN	0	527.7691040039062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LPDRDPGRE_	REV__ENST00000587541.5_2_19:489254-489359:+|nuORF	34.172542307311794	0.30503706118289736	3				NaN	NaN	0	NaN	7331	5120	12451
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12454	36.78	NaN	2761.5	30	0	284.24	0.035	+			1952	AIVAYGLYK	9	61	499.2900890952758	996.5656252573516	2	499.28887939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AIVAYGLYK_	ENSG00000181061|ENST00000321331|HIGD1A;ENST00000470543.1_1_3:42826765-42845976:-|nuORF;nc|ENSG00000181061|Q9Y241-2|HIGD1A	68.484700416344	0.1473408039581241	3				NaN	NaN	0	NaN	7332	5120	12451
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12458	36.794	NaN	1300.9	30	0	84.478	0.143				-1	YVLYMSSR	8	62	517.7514976515652	NaN	0	517.7509155273438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_YVLYM(Oxidation (M))SSR_	ENSG00000124818|ENST00000371211|OPN5	40.5726180659479	1.7418937515398478	3				NaN	NaN	0	NaN	7333	5123	12457
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12462	36.81	NaN	2017	30	0	361.06	0.143	+			23970	LDTQTSQVL	9	56	502.7671578005184	1003.5197626678369	2	502.7670593261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LDTQTSQVL_	ENSG00000261150|ENST00000615648|EPPK1;EPPK1|p.G2015Vfs*36|2|0.33|ENSG00000261150|chr8:143867210-143867210|C/-|frameshift_variant	69.6276240434122	0.14239879520340665	3				NaN	NaN	0	NaN	7334	5126	12461
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12467	36.826	NaN	2498.9	30	0	178.65	0.143			+	51375	YTKNYHIL	8	59	526.28366408317	1050.55277523314	2	526.27880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YTKNYHIL_	REV__ENSG00000144406|ENST00000673920|UNC80;REV__ENST00000489023.5_1_2:210693994-210832362:+|nuORF;REV__nc|ENSG00000144406|Q8N2C7-2|UNC80;REV__nc|ENSG00000144406|Q8N2C7-4|UNC80;REV__nc|ENSG00000144406|Q8N2C7-7|UNC80;REV__nc|ENSG00000144406|Q8N2C7|UNC80;REV__UNC80|p.P2700Hfs*13|1|0.23|ENSG00000144406|chr2:209972238-209972238|C/-|frameshift_variant	31.954861631926434	0.7126016770032289	3				NaN	NaN	0	NaN	7336	5129	12466
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12471	36.842	NaN	2027.1	30	0	184.27	0.214			+	47824	VSKQEELL	8	49	473.2669842754766	944.5194156177532	2	473.26611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSKQEELL_	REV__ENSG00000188878|ENST00000636174|FBF1;REV__ENST00000585990.5_1_17:73910371-73916335:-|nuORF;REV__ENST00000593076.1_1_17:73910704-73911112:-|nuORF;REV__nc|ENSG00000188878|Q8TES7-2|FBF1;REV__nc|ENSG00000188878|Q8TES7-5|FBF1;REV__nc|ENSG00000188878|Q8TES7|FBF1	44.377184641726394	0.6291511924298419	3				NaN	NaN	0	NaN	7337	5132	12470
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12472	36.846	NaN	1777.1	30	0	254.47	0.106	+			30026	PPQFQNLLL	9	60	535.3045551860171	1068.594557438834	2	535.3040771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PPQFQNLLL_	L1PA8_dup4178|chr8:94121319-94127043:-|4.057818296907117|0.2856926403965029|3.83|481.0|205|1|anti-sense	38.80614096846853	0.43426287593479557	3				NaN	NaN	0	NaN	7338	5132	12470
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12473	36.848	NaN	1146.3	30	0	134.65	0.034			+	36566	SFRTAMLS	8	52	456.7337946657286	NaN	0	456.73321533203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SFRTAMLS_	REV__nc|ENSG00000265972|Q9H3M7-2|TXNIP	38.80614096846853	1.7418937515398478	3				NaN	NaN	0	NaN	7339	5132	12470
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12477	36.862	NaN	1334.7	30	0	199.33	0.214			+	-1	KGPISVGCEY	10	51	555.2674594294091	1108.520365925618	2	555.2673950195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_KGPISVGC(Carbamidomethyl (C))EY_	REV__ENSG00000164694|ENST00000297267|FNDC1;REV__nc|ENSG00000164694|Q4ZHG4-2|FNDC1	35.15202426646627	0.5927656479315102	3				NaN	NaN	0	NaN	7340	5135	12476
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12478	36.865	NaN	1176.7	30	0	117.02	0.106			+	-1	SPSCPHREK	9	61	549.2599884030564	NaN	0	549.2608032226562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SPSC(Carbamidomethyl (C))PHREK_	REV__ENSG00000154548|ENST00000452027|SRSF12	39.252832667884924	0.27938773122138094	3				NaN	NaN	0	NaN	7341	5135	12476
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12479	36.867	NaN	798.43	30	0	83.214	0.033	+			11960	FVLFLFGG	8	46	450.25266590600955	NaN	0	450.252685546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FVLFLFGG_	nc|ENSG00000212710|Q9HC47|CTAGE1	33.49298260027079	1.7418937515398478	3				NaN	NaN	0	NaN	7342	5135	12476
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12484	36.881	NaN	1447.1	30	0	132.61	0.144			+	51506	YVQFPTAIR	9	59	547.8048095703125	NaN	0	547.8048095703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YVQFPTAIR_	REV__CLUH|p.D1252Tfs*5|1|0.42|ENSG00000132361|chr17:2690771-2690771|T/-|frameshift_variant;REV__CLUH|p.K974Rfs*21|1|0.3|ENSG00000132361|chr17:2694178-2694178|G/-|frameshift_variant;REV__CLUH|p.P878Rfs*12|1|0.23|ENSG00000132361|chr17:2694959-2694959|G/-|frameshift_variant;REV__CLUH|p.Q326Pfs*22|1|0.17|ENSG00000132361|chr17:2700760-2700761|-/G|frameshift_variant;REV__ENSG00000132361|ENST00000651024|CLUH;REV__nc|ENSG00000132361|O75153|CLUH	37.81151784470057	0.28666463014928195	3				NaN	NaN	0	NaN	7344	5138	12483
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12489	36.898	NaN	1697	30	0	301.91	0.142	+			26725	LVLHSLEK	8	55	469.7877887308716	937.5610245285433	2	469.7870788574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LVLHSLEK_	ENST00000505284.5_1_4:128861113-128864984:-|nuORF	76.84663266511073	0.3498490246073164	3				NaN	NaN	0	NaN	7346	5141	12488
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12493	36.913	NaN	2876.2	30	0	898.91	0.213			+	-1	EYCFGMTSVI	10	65	603.7626504540785	1205.510747974957	2	603.7635498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_EYC(Carbamidomethyl (C))FGMTSVI_	REV__ENST00000376573.8_1_10:22825056-22825101:-|nuORF	27.882242232435846	0.6521336255503853	3				NaN	NaN	0	NaN	7347	5144	12492
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12494	36.917	NaN	1094.1	30	0	98.878	0.106	+			50173	WLGLALLAA	9	51	464.28448670162624	NaN	0	464.28485107421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WLGLALLAA_	ENST00000524395.5_1_8:146277868-146278117:+|nuORF;ENST00000529593.1_1_8:146277868-146278266:+|nuORF	39.021493756699265	0.2805557132942146	3				NaN	NaN	0	NaN	7348	5144	12492
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12495	36.919	NaN	1871.8	30	0	532.63	0.036	+			16776	HNYHTRSAL	9	61	549.7766615981049	1097.5387702630096	2	549.776611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HNYHTRSAL_	PHIP|p.R797H|1|0.39|ENSG00000146247|chr6:78988279-78988279|C/T|missense_variant	39.252832667884924	0.4290233611298554	3				NaN	NaN	0	NaN	7349	5144	12492
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12499	36.933	NaN	1696.7	30	0	169.62	0.214	+			48121	VSVEKIDLK	9	59	515.811472543808	1029.608392154416	2	516.2659301757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSVEKIDLK_	ENSG00000140948|ENST00000671377|ZCCHC14;nc|ENSG00000140948|Q8WYQ9-2|ZCCHC14;nc|ENSG00000140948|Q8WYQ9|ZCCHC14;ZCCHC14|p.N110Mfs*18|1|0.34|ENSG00000140948|chr16:87433156-87433156|T/-|frameshift_variant	20.030474535948922	0.6112419832031293	3				NaN	NaN	0	NaN	7350	5147	12498
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12500	36.936	NaN	1919.1	30	0	83.611	0.106	+			50150	WKCGFFKR	8	64	536.2789941957714	NaN	0	536.2783203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WKCGFFKR_	ENSG00000005884|ENST00000320031|ITGA3;ENSG00000091409|ENST00000684293|ITGA6;ENST00000505306.5_1_17:48154319-48165696:+|nuORF;nc|ENSG00000091409|P23229-3|ITGA6;nc|ENSG00000091409|P23229-4|ITGA6;nc|ENSG00000091409|P23229-5|ITGA6;nc|ENSG00000091409|P23229-6|ITGA6;nc|ENSG00000091409|P23229-7|ITGA6;nc|ENSG00000091409|P23229-9|ITGA6;nc|ENSG00000091409|P23229|ITGA6	40.5726180659479	1.7418937515398478	3				NaN	NaN	0	NaN	7351	5147	12498
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12501	36.938	NaN	2257.6	30	0	190.46	0.106			+	50168	WLCLGVIVL	9	60	508.3034103729142	NaN	0	508.3047180175781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_WLCLGVIVL_	REV__ENSG00000100031|ENST00000400382|GGT1;REV__ENST00000453783.1_1_22:18775260-18778720:-|nuORF;REV__ENST00000474191.6_1_22:25006472-25011014:+|nuORF;REV__nc|ENSG00000100031|P19440-2|GGT1;REV__nc|ENSG00000133475|P36268-2|GGT2P;REV__nc|ENSG00000133475|P36268-3|GGT2P;REV__nc|ENSG00000133475|P36268|GGT2P;REV__nc|ENSG00000197421|A6NGU5|GGT3P	49.21078951299608	0.21213183292994464	3				NaN	NaN	0	NaN	7352	5147	12498
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12502	36.94	NaN	1063.6	30	0	85.264	0.038				-1	FFFLFCCW	8	58	613.7610105904095	1225.5074682476188	2	613.7615966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_FFFLFC(Carbamidomethyl (C))C(Carbamidomethyl (C))W_	ENSG00000131808|ENST00000533718|FSHB	24.504012794735996	0.7701314986472447	3				NaN	NaN	0	NaN	7353	5147	12498
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12506	36.955	NaN	4763.8	30	0	505.16	0.214	+			18434	ISCVNLAFK	9	69	526.28366408317	1050.55277523314	2	526.2840576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_ISC(Carbamidomethyl (C))VNLAFK_	ENST00000227758.6_3_11:102219989-102220022:+|nuORF	115.49404669440601	0.023927554121326553	3				NaN	NaN	0	NaN	7354	5150	12505
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12507	36.959	NaN	2449.1	30	0	267.48	0.106	+			42208	TAAGLMHTF	9	63	474.7344813453099	947.4544097574199	2	475.2359313964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAAGLMHTF_	ENSG00000086475|ENST00000327347|SEPHS1;ENSG00000179918|ENST00000478753|SEPHS2;ENST00000446112.1_1_X:72989760-72990255:+|nuORF;nc|ENSG00000086475|P49903-3|SEPHS1;nc|ENSG00000086475|P49903-4|SEPHS1	64.20726635412375	0.17854274437659667	3				NaN	NaN	0	NaN	7355	5150	12505
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12508	36.96	NaN	1917.2	30	0	253.73	0.033	+			11834	FSVTGRVL	8	55	439.7585577537257	877.5025625742514	2	439.75836181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FSVTGRVL_	ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;nc|ENSG00000185164|Q5JPE7-3|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2;NOMO1|p.P1102Hfs*42|1|0.36|ENSG00000103512|chr16:14886838-14886838|C/-|frameshift_variant	104.74654710444128	0.24806011021879068	3				NaN	NaN	0	NaN	7356	5150	12505
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12512	36.974	NaN	3935.4	30	0	418.81	0.214	+			45604	TYPDVNNSI	9	68	511.74349247139645	1021.4724320095929	2	511.7439270019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TYPDVNNSI_	ENSG00000122958|ENST00000263559|VPS26A;nc|ENSG00000122958|O75436-2|VPS26A	109.47833844074708	0.029530294723441826	3				NaN	NaN	0	NaN	7357	5153	12511
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12513	36.978	NaN	2406	30	0	374.86	0.034	+			47112	VLMKFSTN	8	54	470.2511861996273	938.4878194660546	2	470.2510986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VLMKFSTN_	ENSG00000059588|ENST00000040877|TARBP1	31.954861631926434	0.7126016770032289	3				NaN	NaN	0	NaN	7358	5153	12511
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12520	36.994	NaN	2033.7	30	0	146.66	0.214			+	23438	LADENKAISN	10	61	537.7760481154878	1073.5375432977755	2	538.2767333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LADENKAISN_	REV__CHRNB3|p.E27K|1|0.3|ENSG00000147432|chr8:42708743-42708743|G/A|missense_variant	56.43379154798735	0.3982744522255666	3				NaN	NaN	0	NaN	7362	5156	12519
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12521	36.998	NaN	1371.8	30	0	140.14	0.106	+			28248	NDIVISKL	8	53	451.27152107465145	900.5284892161029	2	451.27117919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NDIVISKL_	ENSG00000113141|ENST00000417647|IK	81.52500206392136	0.31086665013097015	3				NaN	NaN	0	NaN	7363	5156	12519
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12522	37	NaN	862.83	30	0	91.948	0.033			+	45117	TVKAIIDV	8	36	429.76819714048366	NaN	0	429.7688903808594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVKAIIDV_	REV__ENST00000529357.5_1_17:43475293-43487738:-|nuORF;REV__ENST00000579357.1_1_17:43487543-43487738:-|nuORF	34.172542307311794	1.7418937515398478	3				NaN	NaN	0	NaN	7364	5156	12519
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12527	37.014	NaN	1471.6	30	0	133.58	0.142	+			23876	LDGGKELKI	9	53	486.7904260193213	971.5662991054426	2	486.7900695800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LDGGKELKI_	nc|ENSG00000282100|Q58FF6|HSP90AB4P	42.86426827375447	0.38666266728046506	3				NaN	NaN	0	NaN	7366	5159	12526
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12531	37.03	NaN	21789	30	0	4199.3	0.214	+			41590	SVQGIIIYR	9	71	524.8110036487752	1047.6074543643504	2	524.8112182617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVQGIIIYR_	ENSG00000005022|ENST00000317881|SLC25A5;ENSG00000151729|ENST00000281456|SLC25A4;ENSG00000169100|ENST00000381401|SLC25A6;ENST00000406156.2_1_6:121975405-121975696:+|nuORF;ENST00000435239.1_1_7:32511604-32512018:+|nuORF	159.27591364854348	0.004707062175358555	3				NaN	NaN	0	NaN	7367	5162	12530
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12532	37.034	NaN	2128.9	30	0	345.38	0.106	+			27911	MTVFRMAR	8	61	506.2647665611168	1010.5149801890336	2	506.2642822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MTVFRMAR_	ENSG00000142511|ENST00000270590|GPR32	38.80614096846853	0.6637206697844082	3				NaN	NaN	0	NaN	7368	5162	12530
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12533	37.036	NaN	1980.6	30	0	176.46	0.106	+			27469	MLRAAREKG	9	63	516.2941569136541	1030.573760894108	2	516.2943725585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MLRAAREKG_	L1PA3_dup1321|chr2:173527290-173533317:-|1.892281258594111|0.2637255971055219|2.84|482.0|14|1|sense;L1PA8_dup4178|chr8:94121319-94127043:-|4.057818296907117|0.2856926403965029|3.83|481.0|63|2|sense;nc|ENSG1000|Q9UN81|L1_ORF1	49.44154591367651	0.3095138337212152	3				NaN	NaN	0	NaN	7369	5162	12530
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12534	37.038	NaN	1737	30	0	174.51	0.038			+	-1	RHNISCYQI	9	59	595.7920939387732	1189.5696349443463	2	595.79150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_RHNISC(Carbamidomethyl (C))YQI_	REV__TPCN2|p.R60C|1|0.26|ENSG00000162341|chr11:69054724-69054724|C/T|missense_variant	31.529811441608018	0.5085848003137583	3				NaN	NaN	0	NaN	7370	5162	12530
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12540	37.052	NaN	1532.8	30	0	104.92	0.144	+			43301	TFSRLMNLT	9	66	541.7852215900721	1081.555890246944	2	541.7840576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TFSRLMNLT_	CD180|p.A649Cfs*3|1|0.26|ENSG00000134061|chr5:67182898-67182899|-/A|frameshift_variant;CD180|p.K168Qfs*16|1|0.36|ENSG00000134061|chr5:67184341-67184342|-/G|frameshift_variant;ENSG00000134061|ENST00000256447|CD180	42.396135135203025	0.392153681582562	3				NaN	NaN	0	NaN	7373	5165	12539
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12545	37.068	NaN	2223.7	30	0	432.64	0.144			+	46979	VKLKTESHY	9	67	552.8062906403114	1103.5980283474228	2	552.8065185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VKLKTESHY_	REV__ENSG00000218819|ENST00000405799|TDRD15	41.42661286455405	0.403525789677298	3				NaN	NaN	0	NaN	7375	5168	12544
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12550	37.085	NaN	1691.2	30	0	321.98	0.214	+			41212	SVLEGVLSK	9	49	466.2766248637949	930.5386967943898	2	466.2760925292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVLEGVLSK_	CADPS2|p.N1185Tfs*15|1|0.4|ENSG00000081803|chr7:122345632-122345632|T/-|frameshift_variant;ENSG00000081803|ENST00000449022|CADPS2;nc|ENSG00000081803|Q86UW7-2|CADPS2;nc|ENSG00000081803|Q86UW7-3|CADPS2	63.53385203322761	0.18415635464017938	3				NaN	NaN	0	NaN	7377	5171	12549
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12551	37.088	NaN	1707.1	30	0	145.23	0.034	+			161	AAISLAFSK	9	54	454.266248113931	906.517943294662	2	454.2654724121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAISLAFSK_	ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A;TOP2A|p.K1199Efs*11|1|0.23|ENSG00000131747|chr17:40396408-40396409|-/C|frameshift_variant;TOP2A|p.T1205Hfs*19|4|0.35|ENSG00000131747|chr17:40396390-40396390|T/-|frameshift_variant	36.446750945000026	0.4619375763483977	3				NaN	NaN	0	NaN	7378	5171	12549
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12555	37.102	NaN	1792	30	0	129.47	0.214	+			1155	AEMYVAKF	8	55	479.73893694670966	957.4633209602193	2	479.7383728027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEMYVAKF_	EEF2|p.E241Rfs*13|1|0.26|ENSG00000167658|chr19:3982316-3982316|C/-|frameshift_variant;ENSG00000167658|ENST00000309311|EEF2	68.78682469695295	0.41700713582915416	3				NaN	NaN	0	NaN	7379	5174	12554
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12556	37.106	NaN	1311.8	30	0	67.255	0.106				-1	MLAVCGAAL	9	47	461.229850829782	NaN	0	461.2301025390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))LAVC(Carbamidomethyl (C))GAAL_	ENSG00000119681|ENST00000261978|LTBP2	39.021493756699265	0.2805557132942146	3				NaN	NaN	0	NaN	7380	5174	12554
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12557	37.108	NaN	1051.4	30	0	142.78	0.106	+			33334	RGTPGYLTL	9	47	489.27362060546875	NaN	0	489.27362060546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RGTPGYLTL_	ENST00000574902.5_1_16:3191344-3191665:+|nuORF	37.81151784470057	0.28666463014928195	3				NaN	NaN	0	NaN	7381	5174	12554
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12558	37.11	NaN	1106.1	30	0	218.46	0.035	+			49040	VVIASEALW	9	48	494.2770482895362	986.5395436458724	2	494.77740478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVIASEALW_	ENSG00000143147|ENST00000682931|GPR161;ENST00000493800.1_1_1:168059784-168074118:-|nuORF;nc|ENSG00000143147|Q8N6U8-2|GPR161;nc|ENSG00000143147|Q8N6U8-3|GPR161;nc|ENSG00000143147|Q8N6U8-4|GPR161;nc|ENSG00000143147|Q8N6U8-5|GPR161;nc|ENSG00000143147|Q8N6U8-6|GPR161	31.954861631926434	0.5046124803899898	3				NaN	NaN	0	NaN	7382	5174	12554
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12562	37.124	NaN	2591	30	0	680.53	0.214	+			18926	IVNDFAYMK	9	68	550.7761522618214	1099.5377515904427	2	550.7757568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IVNDFAYMK_	ENSG00000170348|ENST00000303575|TMED10;ENST00000534816.1_1_8:146220430-146220868:+|nuORF;ENST00000555036.1_1_14:75602424-75614456:-|nuORF;ENST00000555873.1_1_14:75601590-75605782:-|nuORF;ENST00000556969.5_1_14:75601590-75614465:-|nuORF	56.632244143249146	0.24168844994051353	3				NaN	NaN	0	NaN	7383	5177	12561
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12563	37.127	NaN	939.48	30	0	106.48	0.035			+	14748	GTKEKKIGF	9	27	336.534456616424	1006.581540449472	3	336.5343322753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTKEKKIGF_	REV__ENSG00000110844|ENST00000548825|PRPF40B;REV__nc|ENSG00000110844|Q6NWY9-2|PRPF40B;REV__nc|ENSG00000110844|Q6NWY9-3|PRPF40B;REV__nc|ENSG00000110844|Q6NWY9|PRPF40B	12.206847966760668	0.6112419832031292	3				NaN	NaN	0	NaN	7384	5177	12561
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12575	37.173	NaN	2098.8	30	0	275.04	0.213	+			10620	EYNKSWQTF	9	62	601.7780190628637	1201.5414851925273	2	601.77685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EYNKSWQTF_	ENSG00000198440|ENST00000333201|ZNF583	60.11826168202944	0.21262886028301267	3				NaN	NaN	0	NaN	7387	5186	12574
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12576	37.176	NaN	1864.7	30	0	379.11	0.106	+			37957	SPFTVKVTG	9	54	468.26362516388167	934.5126973945634	2	468.2635498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SPFTVKVTG_	ENSG00000128591|ENST00000325888|FLNC;FLNC|p.H2471Tfs*58|1|0.18|ENSG00000128591|chr7:128856767-128856767|C/-|frameshift_variant;nc|ENSG00000128591|Q14315-2|FLNC	64.20726635412375	0.17854274437659667	3				NaN	NaN	0	NaN	7388	5186	12574
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12577	37.178	NaN	2336.6	30	0	140.57	0.106			+	1062	AEKSLSKPY	9	69	511.77976128649186	1021.5449696397837	2	511.7801818847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEKSLSKPY_	REV__ENSG00000154229|ENST00000413366|PRKCA;REV__PRKCA|p.E588Rfs*4|1|0.53|ENSG00000154229|chr17:66788883-66788883|G/-|frameshift_variant	51.19269402634007	0.2889735674168909	3				NaN	NaN	0	NaN	7389	5186	12574
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12578	37.18	NaN	658.39	30	0	50.583	0.033	+			23894	LDKATVLL	8	47	436.775991073587	NaN	0	436.7761535644531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LDKATVLL_	ENSG00000150593|ENST00000280154|PDCD4;ENST00000489049.5_1_10:112647518-112650449:+|nuORF;nc|ENSG00000150593|Q53EL6-2|PDCD4	45.97224482568171	1.7418937515398478	3				NaN	NaN	0	NaN	7390	5186	12574
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12582	37.195	NaN	2676.1	30	0	456.41	0.214	+			12724	GEKTISVVL	9	55	473.28501810252993	944.5554832718599	2	473.2842712402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEKTISVVL_	ENSG00000073050|ENST00000262887|XRCC1;ENST00000594511.1_1_19:44078923-44079610:-|nuORF;ENST00000595789.5_1_19:44056953-44079610:-|nuORF	79.71258880314673	0.09879134589249085	3				NaN	NaN	0	NaN	7391	5189	12581
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12583	37.198	NaN	2038.5	30	0	220.93	0.106			+	43262	TFAERLIGT	9	57	504.27897264818813	1006.5433923631763	2	504.2764587402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TFAERLIGT_	REV__ENSG00000188313|ENST00000342435|PLSCR1;REV__ENST00000478267.5_1_3:146234735-146251325:-|nuORF;REV__ENST00000484560.1_1_3:146234424-146234930:-|nuORF;REV__nc|ENSG00000188313|O15162-2|PLSCR1	47.657333605630114	0.33044192980041115	3				NaN	NaN	0	NaN	7392	5189	12581
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12584	37.2	NaN	1921.9	30	0	236.21	0.106			+	26354	LTALTKMAEL	10	62	545.8128245566909	1089.6110961801817	2	545.8124389648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LTALTKMAEL_	REV__ENSG00000124275|ENST00000440940|MTRR;REV__nc|ENSG00000124275|Q9UBK8-1|MTRR	47.227680397652996	0.4825456260682108	3				NaN	NaN	0	NaN	7393	5189	12581
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12585	37.202	NaN	944.29	30	0	110.75	0.034			+	10502	EVSRVTSF	8	48	462.74432373046875	NaN	0	462.74432373046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EVSRVTSF_	REV__ENSG00000237110|ENST00000434551|TAAR9	37.15910966729921	1.7418937515398478	3				NaN	NaN	0	NaN	7394	5189	12581
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12590	37.216	NaN	1710.2	30	0	137.15	0.215				-1	VSMLARELP	9	62	516.2795870347813	NaN	0	516.2798461914062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_VSM(Oxidation (M))LARELP_	ENSG00000130313|ENST00000252603|PGLS;ENST00000596799.1_1_19:17622481-17623081:+|nuORF	64.20726635412375	0.13137488984569443	3				NaN	NaN	0	NaN	7396	5192	12589
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12591	37.22	NaN	1063.3	30	0	116.04	0.106			+	2156	ALLLADGVRA	10	50	499.8038842428369	997.5932155524738	2	499.802490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ALLLADGVRA_	REV__ENSG00000069018|ENST00000513104|TRPC7;REV__nc|ENSG00000069018|Q9HCX4-2|TRPC7;REV__nc|ENSG00000069018|Q9HCX4-3|TRPC7	25.57405402267927	0.6709832231498071	3				NaN	NaN	0	NaN	7397	5192	12589
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12592	37.222	NaN	1285.9	30	0	62.09	0.035	+			10471	EVPNTLRVL	9	56	520.8103637695312	NaN	0	520.8103637695312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EVPNTLRVL_	ENSG00000137877|ENST00000320955|SPTBN5;SPTBN5|p.A3297Gfs*48|1|0.56|ENSG00000137877|chr15:41853672-41853673|-/C|frameshift_variant;SPTBN5|p.G2751Afs*60|1|0.08|ENSG00000137877|chr15:41857685-41857685|C/-|frameshift_variant	32.81241826257853	0.3119040447479903	3				NaN	NaN	0	NaN	7398	5192	12589
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12602	37.255	NaN	10924	30	0	2827.9	0.214				-1	 	0	72	505.7616612699842	1009.5087696067684	2	505.7608947753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7402	5198	12601
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12603	37.259	NaN	2203.4	30	0	425.21	0.106	+			7189	DAHISSML	8	50	437.2105785547681	872.4066041763363	2	437.21026611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DAHISSML_	ENSG00000096433|ENST00000605930|ITPR3;ITPR3|p.N1746Tfs*30|1|0.2|ENSG00000096433|chr6:33684872-33684872|A/-|frameshift_variant;ITPR3|p.R2604Gfs*30|1|0.27|ENSG00000096433|chr6:33694944-33694944|C/-|frameshift_variant	62.97842346883844	0.4722955155785405	3				NaN	NaN	0	NaN	7403	5198	12601
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12604	37.261	NaN	2234.4	30	0	866.97	0.036	+			16722	HLFTLPGATP	10	61	527.2903536040996	1052.566154274999	2	527.2914428710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HLFTLPGATP_	nc|ENSG00000154358|Q5VST9-3|OBSCN	30.503639358989545	0.6307262373768582	3				NaN	NaN	0	NaN	7404	5198	12601
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12608	37.275	NaN	1499.4	30	0	176.56	0.214	+			44781	TTQKLVLEY	9	57	547.8087566256143	1093.6029603180284	2	547.8087768554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTQKLVLEY_	ENSG00000136848|ENST00000408936|DAB2IP;nc|ENSG00000136848|Q5VWQ8-2|DAB2IP;nc|ENSG00000136848|Q5VWQ8-3|DAB2IP;nc|ENSG00000136848|Q5VWQ8-4|DAB2IP;nc|ENSG00000136848|Q5VWQ8-5|DAB2IP	44.377184641726394	0.36891676396732553	3				NaN	NaN	0	NaN	7405	5201	12607
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12609	37.278	NaN	1594.9	30	0	288.66	0.037	+			45808	VAIGLAWTPLG	11	37	366.54984916374315	NaN	0	366.5497131347656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VAIGLAWTPLG_	ENSG00000102910|ENST00000285737|LONP2;LONP2|p.D678Efs*7|1|0.07|ENSG00000102910|chr16:48347601-48347602|-/GT|frameshift_variant;nc|ENSG00000102910|Q86WA8-2|LONP2	27.047317107675042	0.44487757903053116	3				NaN	NaN	0	NaN	7406	5201	12607
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12615	37.295	NaN	3389.5	30	0	462.87	0.214			+	2809	ARVTFVHKTK	10	70	593.8562889356926	1185.6980249381852	2	593.8561401367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ARVTFVHKTK_	REV__ENSG00000086570|ENST00000261800|FAT2;REV__FAT2|p.D4043Tfs*8|1|0.1|ENSG00000086570|chr5:151507544-151507544|C/-|frameshift_variant;REV__FAT2|p.P2377Qfs*41|1|0.34|ENSG00000086570|chr5:151543997-151543997|G/-|frameshift_variant;REV__FAT2|p.V3716Ffs*44|1|0.22|ENSG00000086570|chr5:151521447-151521447|C/-|frameshift_variant;REV__FAT2|p.Y3462Tfs*16|1|0.37|ENSG00000086570|chr5:151525891-151525891|G/-|frameshift_variant	40.05817265558897	0.5486090488315611	3				NaN	NaN	0	NaN	7409	5204	12614
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12616	37.298	NaN	922.04	30	0	97.364	0.038			+	8762	EEGLYCSKFM	10	43	603.7626504540785	1205.510747974957	2	603.7618408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EEGLYCSKFM_	REV__ENST00000535414.5_1_1:101360442-101360541:-|nuORF	15.333111300571575	0.7385351678742351	3				NaN	NaN	0	NaN	7410	5204	12614
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12620	37.312	NaN	1226.8	30	0	118.4	0.214			+	10168	ESVVVLGGSI	10	54	480.274494582374	958.534436231548	2	480.2735595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ESVVVLGGSI_	REV__ENST00000376387.4_1_13:100153672-100153861:+|nuORF	66.42927471994793	0.3073667423445326	3				NaN	NaN	0	NaN	7411	5207	12619
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12621	37.316	NaN	1114.9	30	0	177.71	0.037	+			10957	FDYNSQQQL	9	62	571.7604777358246	NaN	0	571.7603759765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FDYNSQQQL_	ENSG00000055917|ENST00000361078|PUM2;ENSG00000134644|ENST00000426105|PUM1;nc|ENSG00000055917|Q8TB72-2|PUM2;nc|ENSG00000055917|Q8TB72-4|PUM2;nc|ENSG00000055917|Q8TB72|PUM2;nc|ENSG00000134644|Q14671-2|PUM1;nc|ENSG00000134644|Q14671-4|PUM1;nc|ENSG00000134644|Q14671|PUM1	37.81151784470057	0.28666463014928195	3				NaN	NaN	0	NaN	7412	5207	12619
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12628	37.332	NaN	1466.2	30	0	499.5	0.214	+			308	AAPLRLIAA	9	44	448.2901311311155	894.565709329031	2	448.2892150878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAPLRLIAA_	ENSG00000112159|ENST00000369393|MDN1;MDN1|p.D409Rfs*22|1|0.16|ENSG00000112159|chr6:89789788-89789789|-/G|frameshift_variant;MDN1|p.E2692*|2|0.32|ENSG00000112159|chr6:89706133-89706134|-/A|frameshift_variant;MDN1|p.F2691Lfs*7|2|0.37|ENSG00000112159|chr6:89706134-89706134|A/-|frameshift_variant;MDN1|p.K2642Nfs*17|2|0.29|ENSG00000112159|chr6:89707449-89707449|T/-|frameshift_variant;MDN1|p.L4077Cfs*15|1|0.16|ENSG00000112159|chr6:89680625-89680625|G/-|frameshift_variant;MDN1|p.L5278Ffs*6|1|0.18|ENSG00000112159|chr6:89652273-89652274|-/A|frameshift_variant;MDN1|p.N20D|1|0.19|ENSG00000112159|chr6:89819550-89819550|T/C|missense_variant	24.20275056022122	0.577060078256802	3				NaN	NaN	0	NaN	7416	5210	12627
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12629	37.336	NaN	2517.1	30	0	313.63	0.035	+			35899	SEFKAMDSI	9	58	514.2419966555201	1026.46944037784	2	514.2418823242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEFKAMDSI_	CTNNA1|p.L897I|1|0.68|ENSG00000044115|chr5:138934057-138934057|C/A|missense_variant;ENSG00000044115|ENST00000302763|CTNNA1;ENST00000522792.1_1_5:138268134-138269775:+|nuORF;nc|ENSG00000044115|P35221-2|CTNNA1;nc|ENSG00000044115|P35221-3|CTNNA1	120.8684288430529	0.02067403653475984	3				NaN	NaN	0	NaN	7417	5210	12627
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12633	37.35	NaN	2195.7	30	0	212.47	0.215	+			12909	GESGIKVAVL	10	55	486.79004159046457	971.5655302477292	2	486.7894287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GESGIKVAVL_	ENSG00000164091|ENST00000296490|WDR82;ENST00000487402.1_1_3:52291508-52301068:-|nuORF	58.22992032128504	0.38193887838457763	3				NaN	NaN	0	NaN	7418	5213	12632
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12634	37.353	NaN	2478	30	0	628.91	0.106			+	31355	QKAIYAEQL	9	65	532.293217867625	1062.57188280205	2	532.2922973632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QKAIYAEQL_	REV__ENSG00000104381|ENST00000220822|GDAP1;REV__GDAP1|p.R191Q|1|0.37|ENSG00000104381|chr8:74361971-74361971|G/A|missense_variant;REV__nc|ENSG00000104381|Q8TB36-2|GDAP1	41.42661286455405	0.403525789677298	3				NaN	NaN	0	NaN	7419	5213	12632
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12635	37.355	NaN	2075.3	30	0	217.27	0.036	+			37555	SLMHSFILK	9	66	538.3028728510365	1074.5911927688728	2	538.3027954101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLMHSFILK_	ENSG00000125971|ENST00000357156|DYNLRB1;ENST00000480759.1_1_20:33117938-33128425:+|nuORF	42.86426827375447	0.38666266728046506	3				NaN	NaN	0	NaN	7420	5213	12632
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12640	37.369	NaN	2955	30	0	200.67	0.143	+			41591	SVQGIIIYR	9	65	524.8110036487752	1047.6074543643504	2	524.8108520507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVQGIIIYR_	ENSG00000005022|ENST00000317881|SLC25A5;ENSG00000151729|ENST00000281456|SLC25A4;ENSG00000169100|ENST00000381401|SLC25A6;ENST00000406156.2_1_6:121975405-121975696:+|nuORF;ENST00000435239.1_1_7:32511604-32512018:+|nuORF	96.0336014099291	0.047854655524928534	3				NaN	NaN	0	NaN	7422	5216	12639
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12644	37.385	NaN	2808.7	30	0	397.2	0.145			+	23786	LCLQGRPFDSG	11	57	596.7925953034149	1191.5706376736298	2	596.7918701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LCLQGRPFDSG_	REV__WNK4|p.S637Pfs*14|1|0.42|ENSG00000126562|chr17:42788172-42788173|TT/-|frameshift_variant	30.317721548370564	0.6717830234747728	3				NaN	NaN	0	NaN	7423	5219	12643
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12648	37.401	NaN	943.12	30	0	114.01	0.142			+	25009	LLGGAGAGLLL	11	44	477.80330960103885	953.5920662688777	2	477.80242919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LLGGAGAGLLL_	REV__ENSG00000163357|ENST00000295542|DCST1;REV__nc|ENSG00000163357|Q5T197-2|DCST1;REV__nc|ENSG00000163357|Q5T197-3|DCST1	50.0245360154114	0.4207767895280948	3				NaN	NaN	0	NaN	7424	5222	12647
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12660	37.449	NaN	1315	30	0	93.265	0.212			+	-1	PKTKCMKWW	9	50	632.8208519151036	1263.6271508970071	2	633.3214721679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_PKTKC(Carbamidomethyl (C))MKWW_	REV__ENST00000374469.5_1_9:113132211-113137658:-|nuORF	26.69291269510374	0.5537881896960711	3				NaN	NaN	0	NaN	7427	5231	12659
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12661	37.452	NaN	1733.9	30	0	538.03	0.106	+			25846	LSELIRQL	8	48	486.2983427464151	970.5821325596302	2	486.2973327636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSELIRQL_	ENST00000378669.5_1_2:42578093-42578192:-|nuORF	35.61828744233558	0.6843154725607303	3				NaN	NaN	0	NaN	7428	5231	12659
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12662	37.454	NaN	1125.1	30	0	104.33	0.106			+	-1	ALAMSFRL	8	59	462.75104408436897	NaN	0	462.75152587890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_ALAM(Oxidation (M))SFRL_	REV__ENST00000518547.5_2_8:125740491-125740596:-|nuORF	37.15910966729921	1.7418937515398478	3				NaN	NaN	0	NaN	7429	5231	12659
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12663	37.456	NaN	1414.1	30	0	207.61	0.035	+			8912	EEVIPKRL	8	52	492.29804657242795	982.5815402116559	2	492.2977600097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EEVIPKRL_	ENSG00000117385|ENST00000296388|P3H1;ENST00000460031.5_1_1:43220834-43232642:-|nuORF;ENST00000495874.5_1_1:43220834-43223503:-|nuORF;nc|ENSG00000117385|Q32P28-3|P3H1;nc|ENSG00000117385|Q32P28-4|P3H1	30.503639358989545	0.7238069182250283	3				NaN	NaN	0	NaN	7430	5231	12659
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12667	37.47	NaN	3016.6	30	0	671.09	0.214			+	24009	LEDIQSFTL	9	73	533.2768883850512	1064.5392238369022	2	533.2765502929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LEDIQSFTL_	REV__tr|U7SU17|U7SU17_FUSNUtRNAthreonylcarbamoyladenosinebiosynthesisproteinTsaEOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01065PE=3SV=1	72.87924865735499	0.12833875048249987	3				NaN	NaN	0	NaN	7431	5234	12666
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12668	37.473	NaN	1571.5	30	0	193.89	0.106	+			12686	GEKGIMVL	8	47	423.74167881735417	845.4688047015084	2	423.74139404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEKGIMVL_	ENSG00000145912|ENST00000274606|NHP2;ENST00000396362.3_1_7:27087888-27088119:+|nuORF	71.29570347882199	0.39610197767395533	3				NaN	NaN	0	NaN	7432	5234	12666
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12669	37.475	NaN	1577.5	30	0	131.6	0.035	+			28224	NAVNLAIKY	9	56	503.29048239667816	1004.5664118601563	2	503.2899169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NAVNLAIKY_	ENSG00000198554|ENST00000360586|WDHD1;nc|ENSG00000198554|O75717-2|WDHD1	84.9155231211612	0.07920012719736333	3				NaN	NaN	0	NaN	7433	5234	12666
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12673	37.489	NaN	1538.3	30	0	236.9	0.214	+			43941	TPAVPVESKP	10	51	512.7873621971951	1023.5601714611902	2	513.287353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TPAVPVESKP_	CAST|p.E474Kfs*10|1|0.39|ENSG00000153113|chr5:96754695-96754695|A/-|frameshift_variant;ENSG00000153113|ENST00000675179|CAST;nc|ENSG00000153113|P20810-10|CAST;nc|ENSG00000153113|P20810-2|CAST;nc|ENSG00000153113|P20810-3|CAST;nc|ENSG00000153113|P20810-4|CAST;nc|ENSG00000153113|P20810-5|CAST;nc|ENSG00000153113|P20810-7|CAST;nc|ENSG00000153113|P20810-8|CAST;nc|ENSG00000153113|P20810-9|CAST;nc|ENSG00000153113|P20810|CAST	32.81241826257853	0.6118718159329168	3				NaN	NaN	0	NaN	7434	5237	12672
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12674	37.493	NaN	1522	30	0	144.09	0.106	+			12855	GEPRIPAPI	9	53	475.2767795619458	NaN	0	475.2769775390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEPRIPAPI_	ENST00000572919.1_3_17:3488830-3495572:-|nuORF	38.80614096846853	0.28164298475537564	3				NaN	NaN	0	NaN	7435	5237	12672
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12675	37.494	NaN	1372.6	30	0	133.06	0.106	+			47240	VMNNNSLLL	9	58	509.27397593656684	1016.5333989399337	2	509.2734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VMNNNSLLL_	ENSG00000138380|ENST00000438828|CARF;nc|ENSG00000138380|Q8N187-3|CARF	47.91560031466742	0.327412564698279	3				NaN	NaN	0	NaN	7436	5237	12672
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12676	37.496	NaN	1398.3	30	0	366.53	0.106			+	-1	CLCHDDSCSGG	11	61	605.7021484375	NaN	0	605.7021484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))LCHDDSC(Carbamidomethyl (C))SGG_	REV__ENSG00000166147|ENST00000316623|FBN1	19.1035232394073	0.456735970842152	3				NaN	NaN	0	NaN	7437	5237	12672
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12677	37.498	NaN	1997.3	30	0	595.21	0.106			+	11665	FQPREDMLQ	9	61	582.27868789834	1162.5428228634798	2	582.280029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FQPREDMLQ_	REV__SPTB|p.K1343R|1|0.33|ENSG00000070182|chr14:64782528-64782528|T/C|missense_variant	52.936696900407355	0.27249468807391813	3				NaN	NaN	0	NaN	7438	5237	12672
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12678	37.5	NaN	1701.4	30	0	222.07	0.106			+	-1	CAALAGHVGIL	11	65	541.2949781164015	NaN	0	541.2944946289062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_C(Carbamidomethyl (C))AALAGHVGIL_	REV__nc|ENSG00000079337|O95398-2|RAPGEF3	31.954861631926434	0.423006731851301	3				NaN	NaN	0	NaN	7439	5237	12672
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12679	37.502	NaN	1193.3	30	0	87.422	0.036	+			19862	KEEKLQLQP	9	55	556.8198888802646	1111.625224827329	2	556.8190307617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KEEKLQLQP_	ENSG00000119471|ENST00000398805|HSDL2;nc|ENSG00000119471|Q6YN16-2|HSDL2	32.81241826257853	0.4965981579233955	3				NaN	NaN	0	NaN	7440	5237	12672
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12685	37.518	NaN	1852.5	30	0	147.63	0.145			+	-1	PPCASTSVMF	10	56	548.7429943873302	1095.4714358414603	2	548.7427368164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_PPC(Carbamidomethyl (C))ASTSVMF_	REV__ENST00000473638.5_1_22:39708982-39709710:-|nuORF	45.9519527083369	0.4943008177357963	3				NaN	NaN	0	NaN	7443	5240	12684
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12692	37.549	NaN	11305	30	0	1145.1	0.214				-1	 	0	69	496.76440126324553	991.5142495932911	2	497.26593017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7444	5246	12691
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12693	37.553	NaN	2538.5	30	0	337.85	0.036			+	11063	FESDPVKSR	9	71	532.7722652771727	NaN	0	532.7722778320312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FESDPVKSR_	REV__ENSG00000042832|ENST00000220616|TG;REV__nc|ENSG00000042832|P01266-2|TG;REV__TG|p.E2744Vfs*20|1|0.07|ENSG00000042832|chr8:133134716-133134717|GG/-|frameshift_variant;REV__TG|p.V1600M|1|0.28|ENSG00000042832|chr8:132929174-132929174|G/A|missense_variant;REV__TG|p.W2685Gfs*26|2|0.22|ENSG00000042832|chr8:133133520-133133520|C/-|frameshift_variant	39.252832667884924	0.27938773122138094	3				NaN	NaN	0	NaN	7445	5246	12691
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12698	37.567	NaN	5517.4	30	0	684.86	0.214	+			49115	VVLLQTSPY	9	65	510.29261824798505	1018.5706835627701	2	510.2920837402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVLLQTSPY_	ENSG00000141002|ENST00000263346|TCF25;TCF25|p.S448Lfs*3|1|0.21|ENSG00000141002|chr16:89900755-89900755|T/-|frameshift_variant	47.657333605630114	0.33044192980041115	3				NaN	NaN	0	NaN	7447	5249	12697
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12699	37.571	NaN	4014.1	30	0	409.26	0.106	+			6162	AVQGISGLPLK	11	61	541.8325863755072	1081.6506198178142	2	541.831787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVQGISGLPLK_	ENSG00000167721|ENST00000301364|TSR1	46.98537555051759	0.4623617838550927	3				NaN	NaN	0	NaN	7448	5249	12697
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12700	37.573	NaN	2644.8	30	0	600.92	0.033	+			41638	SVQSGNLAL	9	50	444.74332714893444	887.4721013646689	2	444.74285888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVQSGNLAL_	ENSG00000011304|ENST00000356948|PTBP1;ENST00000586944.5_1_19:797434-805231:+|nuORF;nc|ENSG00000011304|P26599-1|PTBP1;nc|ENSG00000011304|P26599-2|PTBP1	75.04331003522576	0.118981335847003	3				NaN	NaN	0	NaN	7449	5249	12697
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12704	37.586	NaN	1007.8	30	0	74.118	0.214	+			47395	VPLKGIVSY	9	59	488.2977617799554	974.5809706267108	2	488.2973937988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VPLKGIVSY_	ENSG00000138078|ENST00000409411|PREPL;nc|ENSG00000138078|Q4J6C6-2|PREPL;nc|ENSG00000138078|Q4J6C6-3|PREPL;nc|ENSG00000138078|Q4J6C6|PREPL	43.650786325866115	0.37743712540499297	3				NaN	NaN	0	NaN	7450	5252	12703
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12705	37.59	NaN	978.64	30	0	112.47	0.033	+			19377	KALSLLAPA	9	44	442.28463810364644	882.5547232740929	2	442.2840576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KALSLLAPA_	ENSG00000116754|ENST00000370949|SRSF11;ENSG00000153914|ENST00000334121|SREK1;ENST00000520580.5_1_5:65455027-65458421:+|nuORF;nc|ENSG00000116754|Q05519-2|SRSF11;SREK1|p.F87Lfs*7|1|0.42|ENSG00000153914|chr5:66162441-66162441|T/-|frameshift_variant;SREK1|p.K241Nfs*34|1|0.42|ENSG00000153914|chr5:66170115-66170115|A/-|frameshift_variant;SREK1|p.K360Nfs*40|1|0.31|ENSG00000153914|chr5:66170886-66170886|A/-|frameshift_variant;SRSF11|p.K357Sfs*62|1|0.12|ENSG00000116754|chr1:70249995-70249995|A/-|frameshift_variant	49.44154591367651	0.3095138337212152	3				NaN	NaN	0	NaN	7451	5252	12703
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12709	37.604	NaN	1905	30	0	211.34	0.214			+	33619	RLSLELELK	9	62	550.8380057885767	1099.6614586439532	2	550.8367919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RLSLELELK_	REV__KDM7A|p.R97Gfs*41|1|0.08|ENSG00000006459|chr7:140133648-140133648|T/-|frameshift_variant	65.46538089061403	0.16805504838372562	3				NaN	NaN	0	NaN	7452	5255	12708
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12710	37.608	NaN	1440.3	30	0	242.56	0.106			+	12834	GENLVVPEPG	10	54	505.7615966796875	NaN	0	505.7615966796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GENLVVPEPG_	REV__ENSG00000143105|ENST00000369771|KCNA10;REV__KCNA10|p.K435Efs*35|1|0.43|ENSG00000143105|chr1:110517485-110517486|-/C|frameshift_variant	35.15202426646627	0.38475398474706135	3				NaN	NaN	0	NaN	7453	5255	12708
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12711	37.61	NaN	1244	30	0	93.053	0.106	+			810	AEFVGVSHL	9	44	479.7540596812598	957.4935664293196	2	479.75335693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEFVGVSHL_	ENSG00000141101|ENST00000268802|NOB1;ENST00000502915.1_1_4:139481866-139482694:+|nuORF	74.25504064058377	0.12238981753128622	3				NaN	NaN	0	NaN	7454	5255	12708
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12712	37.611	NaN	1426	30	0	212.2	0.034			+	7648	DKQFVLGK	8	53	467.7720632775188	933.5295736218376	2	467.772216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DKQFVLGK_	REV__ENSG00000107960|ENST00000224950|STN1;REV__ENST00000466828.5_1_10:105642444-105658073:-|nuORF	58.78195531508484	0.5138399468736706	3				NaN	NaN	0	NaN	7455	5255	12708
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12719	37.641	NaN	1322.8	30	0	101.68	0.213	+			27879	MTKPYSTIHF	10	55	612.8090555847884	NaN	0	612.8092041015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MTKPYSTIHF_	ENST00000562237.5_1_16:69200987-69202772:+|nuORF;ENST00000563094.5_1_16:69200987-69201092:+|nuORF	27.882242232435846	0.4086243523356342	3				NaN	NaN	0	NaN	7456	5261	12718
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12720	37.644	NaN	864	30	0	212.04	0.035	+			47580	VRLTLASFT	9	29	336.53429750028755	NaN	0	336.86920166015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VRLTLASFT_	ENSG00000204315|ENST00000375156|FKBPL	23.04248740728303	0.3589936788096251	3				NaN	NaN	0	NaN	7457	5261	12718
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12724	37.658	NaN	1368.2	30	0	131.86	0.214				-1	MCQSTRHR	8	55	546.2454758539265	1090.4763987746528	2	546.2453002929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))C(Carbamidomethyl (C))QSTRHR_	CON__ENSEMBL:ENSBTAP00000007350;CON__P01030	29.14955571784316	0.7342621283720113	3				NaN	NaN	0	NaN	7458	5264	12723
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12725	37.662	NaN	1237.6	30	0	143.9	0.106	+			1469	AFIAGAKMIL	10	54	517.8081665039062	NaN	0	517.8081665039062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AFIAGAKMIL_	ENSG00000112249|ENST00000369162|ASCC3;nc|ENSG00000112249|Q8N3C0-4|ASCC3	38.80614096846853	0.372755673314885	3				NaN	NaN	0	NaN	7459	5264	12723
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12726	37.664	NaN	1147.9	30	0	77.726	0.035				-1	IMISPSSPPP	10	61	521.2667236328125	NaN	0	521.2667236328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_IM(Oxidation (M))ISPSSPPP_	ENST00000488174.5_1_X:70767567-70775867:+|nuORF;nc|ENSG00000147162|O15294-2|OGT	42.396135135203025	0.3536752194735987	3				NaN	NaN	0	NaN	7460	5264	12723
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12730	37.677	NaN	2447.6	30	0	899.55	0.144				-1	SSWDPGRTM	9	60	526.7258934044687	1051.4372338757373	2	526.7261352539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_SSWDPGRTM(Oxidation (M))_	ENST00000539649.1_1_11:60971000-60974275:+|nuORF	39.252832667884924	0.4290233611298554	3				NaN	NaN	0	NaN	7461	5267	12729
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12734	37.693	NaN	1979.7	30	0	168.62	0.214	+			17712	IENGHIFTV	9	62	515.2724748167459	1028.5303967002917	2	515.271728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IENGHIFTV_	ENSG00000036257|ENST00000264414|CUL3;nc|ENSG00000036257|Q13618-2|CUL3;nc|ENSG00000036257|Q13618-3|CUL3	58.2462437865262	0.22823408064396822	3				NaN	NaN	0	NaN	7462	5270	12733
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12735	37.696	NaN	1442	30	0	189.8	0.106			+	24712	LHIDGSLM	8	47	443.2289020386458	884.4432511440916	2	443.2288513183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LHIDGSLM_	REV__ENST00000428284.2_1_7:27168486-27168678:-|nuORF	62.97842346883844	0.4722955155785405	3				NaN	NaN	0	NaN	7463	5270	12733
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12736	37.698	NaN	1459.4	30	0	127.52	0.037	+			43877	TMLMLGNILGT	11	61	582.3130535053324	1162.6115540774647	2	582.3129272460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TMLMLGNILGT_	ENSG00000221843|ENST00000447166|C2orf16;nc|ENSG00000221843|Q68DN1|SPATA31H1	33.921630207806714	0.6339809607503234	3				NaN	NaN	0	NaN	7464	5270	12733
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12740	37.712	NaN	4114.9	30	0	330.27	0.214				-1	 	0	58	480.2930513132412	958.5715496932825	2	480.2924499511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7465	5273	12739
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12741	37.715	NaN	2769.7	30	0	223.42	0.106			+	31926	QQPILQMY	8	62	510.7626754441982	1019.5107979551964	2	510.7611083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QQPILQMY_	REV__ENSG00000104960|ENST00000391842|PTOV1;REV__ENST00000596424.1_1_19:50360315-50362048:+|nuORF;REV__nc|ENSG00000104960|Q86YD1-2|PTOV1;REV__nc|ENSG00000104960|Q86YD1-3|PTOV1	46.76643321282427	0.6143254112625767	3				NaN	NaN	0	NaN	7466	5273	12739
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12742	37.717	NaN	1372.1	30	0	134.44	0.106			+	31226	QGWRHIKL	8	55	519.3038626902865	1036.5931724473728	2	519.3038940429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QGWRHIKL_	REV__ENST00000231368.9_1_5:96364479-96364578:+|nuORF	32.81241826257853	0.7059802730411993	3				NaN	NaN	0	NaN	7467	5273	12739
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12743	37.719	NaN	1172.3	30	0	137.53	0.034			+	-1	SVNMLGTVQ	9	48	482.740476651825	NaN	0	482.7405090332031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_SVNM(Oxidation (M))LGTVQ_	REV__ENSG00000257115|ENST00000550708|OR11H12;REV__nc|ENSG00000130538|Q8NG94|OR11H1;REV__OR11H12|p.P298Hfs*15|1|0.59|ENSG00000257115|chr14:18602006-18602006|C/-|frameshift_variant	41.42661286455405	0.26577678759562784	3				NaN	NaN	0	NaN	7468	5273	12739
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12747	37.732	NaN	1614.4	30	0	264.23	0.214	+			46884	VINGLLGNIV	10	57	506.3140236766017	1010.6134944200035	2	506.3135070800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VINGLLGNIV_	nc|ENSG00000217128|Q8TF40-3|FNIP1;REV__nc|ENSG00000217128|Q8TF40-3|FNIP1	33.921630207806714	0.6028135429846169	3				NaN	NaN	0	NaN	7469	5276	12746
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12748	37.736	NaN	1204.1	30	0	85.278	0.106	+			12639	GEIKGFTGI	9	52	461.2561120158418	920.4976710984836	2	461.25616455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEIKGFTGI_	ENSG00000138801|ENST00000265174|PAPSS1;ENSG00000198682|ENST00000456849|PAPSS2;nc|ENSG00000198682|O95340|PAPSS2	58.22992032128504	0.22837015374068087	3				NaN	NaN	0	NaN	7470	5276	12746
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12749	37.738	NaN	1243.4	30	0	145.01	0.034			+	32846	RCQRIPNG	8	51	472.2481024575181	NaN	0	472.2481689453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RCQRIPNG_	REV__ENSG00000001617|ENST00000002829|SEMA3F;REV__nc|ENSG00000001617|Q13275-2|SEMA3F	26.79610172149135	1.7418937515398478	3				NaN	NaN	0	NaN	7471	5276	12746
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12754	37.752	NaN	3789.8	30	0	896.84	0.214	+			44785	TTQLSLSFK	9	68	512.7873621971951	1023.5601714611902	2	512.7880249023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTQLSLSFK_	ENSG00000198786|ENST00000361567|MT-ND5	88.17693792209575	0.07000514020414955	3				NaN	NaN	0	NaN	7473	5279	12753
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12755	37.755	NaN	4383.2	30	0	725.62	0.034			+	34179	RTCTAKRK	8	56	482.2795882907245	962.5446236482491	2	482.27923583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RTCTAKRK_	REV__ASPM|p.I1717Nfs*24|1|0.43|ENSG00000066279|chr1:197104101-197104102|-/T|frameshift_variant;REV__ASPM|p.I3229Nfs*2|1|0.48|ENSG00000066279|chr1:197090339-197090340|-/T|frameshift_variant;REV__ASPM|p.K671Nfs*3|1|0.21|ENSG00000066279|chr1:197139780-197139780|T/-|frameshift_variant;REV__ASPM|p.L1872Ffs*24|1|0.43|ENSG00000066279|chr1:197103635-197103636|-/A|frameshift_variant;REV__ASPM|p.M2261*|1|0.44|ENSG00000066279|chr1:197102470-197102470|T/-|frameshift_variant;REV__ASPM|p.N1062Rfs*28|1|0.1|ENSG00000066279|chr1:197124311-197124315|TAAGT/-|frameshift_variant;REV__ASPM|p.N1680Kfs*11|1|0.33|ENSG00000066279|chr1:197104211-197104212|-/T|frameshift_variant;REV__ASPM|p.Q2620Nfs*22|1|0.15|ENSG00000066279|chr1:197101393-197101394|-/TT|frameshift_variant;REV__ASPM|p.Q2620Tfs*17|1|0.19|ENSG00000066279|chr1:197101393-197101394|-/T|frameshift_variant;REV__ASPM|p.S605Lfs*16|1|0.24|ENSG00000066279|chr1:197142439-197142439|A/-|frameshift_variant;REV__ENSG00000066279|ENST00000367409|ASPM;REV__nc|ENSG00000066279|Q8IZT6-2|ASPM	44.377184641726394	0.6291511924298419	3				NaN	NaN	0	NaN	7474	5279	12753
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12759	37.769	NaN	1937.7	30	0	136.14	0.143	+			36558	SFPILGHSY	9	60	510.7626754441982	1019.5107979551964	2	510.26141357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SFPILGHSY_	ENSG00000214929|ENST00000344803|SPATA31D1	42.396135135203025	0.392153681582562	3				NaN	NaN	0	NaN	7475	5282	12758
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12763	37.784	NaN	2055.5	30	0	429.6	0.215	+			4196	ATFTGILGK	9	52	454.26651110765624	906.5184692821125	2	454.7672119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATFTGILGK_	ENST00000534553.5_1_11:61722629-61730618:+|nuORF;nc|ENSG00000167995|O76090-3|BEST1	85.16082228582465	0.07850854922700509	3				NaN	NaN	0	NaN	7476	5285	12762
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12764	37.788	NaN	970.09	30	0	104.15	0.106			+	18051	IITHNIAI	8	46	447.7735866237165	NaN	0	447.7733154296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IITHNIAI_	REV__ENSG00000104133|ENST00000261866|SPG11;REV__nc|ENSG00000104133|Q96JI7-2|SPG11;REV__nc|ENSG00000104133|Q96JI7-3|SPG11	47.91560031466742	1.7418937515398478	3				NaN	NaN	0	NaN	7477	5285	12762
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12765	37.789	NaN	1705	30	0	471.31	0.035			+	33682	RNSTAVVVVG	10	53	501.29215927943295	NaN	0	501.2914123535156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RNSTAVVVVG_	REV__ENSG00000135537|ENST00000368977|AFG1L	37.50817390946774	0.3770175549877019	3				NaN	NaN	0	NaN	7478	5285	12762
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12769	37.804	NaN	1650.9	30	0	83.164	0.145	+			42821	TEASGTGNMKF	11	60	571.7605316096614	NaN	0	571.760009765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEASGTGNMKF_	ENSG00000068976|ENST00000164139|PYGM;ENSG00000100504|ENST00000216392|PYGL;ENSG00000100994|ENST00000216962|PYGB;ENST00000532107.2_1_14:51374946-51378571:-|nuORF;nc|ENSG00000068976|P11217-2|PYGM;nc|ENSG00000100504|P06737-2|PYGL;PYGB-C20orf152|1|fusion;PYGB-C20orf152|2|fusion	60.11826168202944	0.2317136047664224	3				NaN	NaN	0	NaN	7479	5288	12768
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12773	37.819	NaN	2082	30	0	221.11	0.214	+			17007	HPTIISESF	9	54	515.7642297935997	1029.5139066539994	2	515.7642211914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HPTIISESF_	CCT4|p.T490Lfs*30|1|0.4|ENSG00000115484|chr2:61872105-61872105|T/-|frameshift_variant;ENSG00000115484|ENST00000394440|CCT4;nc|ENSG00000115484|P50991-2|CCT4	51.33545320467046	0.2872990594074956	3				NaN	NaN	0	NaN	7480	5291	12772
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12774	37.823	NaN	1382.8	30	0	161.18	0.035	+			10004	ERNNLMRL	8	57	523.2836970415508	1044.5528411499015	2	523.283447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ERNNLMRL_	ENSG00000092439|ENST00000646667|TRPM7;ENSG00000119121|ENST00000360774|TRPM6;nc|ENSG00000119121|Q9BX84-2|TRPM6;nc|ENSG00000119121|Q9BX84-3|TRPM6;nc|ENSG00000119121|Q9BX84-4|TRPM6;nc|ENSG00000119121|Q9BX84-5|TRPM6;nc|ENSG00000119121|Q9BX84-6|TRPM6;TRPM6|p.E1956Kfs*25|1|0.33|ENSG00000119121|chr9:74728308-74728308|C/-|frameshift_variant	38.80614096846853	0.6637206697844082	3				NaN	NaN	0	NaN	7481	5291	12772
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12778	37.837	NaN	940.72	30	0	140.56	0.142	+			42294	TAEIYKGTV	9	47	491.2666855705099	NaN	0	491.26727294921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAEIYKGTV_	ENSG00000083857|ENST00000441802|FAT1;FAT1|p.G2934Vfs*3|2|0.37|ENSG00000083857|chr4:186617787-186617787|T/-|frameshift_variant;FAT1|p.N3847Yfs*7|1|0.03|ENSG00000083857|chr4:186601370-186601371|-/TTATA|frameshift_variant;FAT1|p.P3228Lfs*42|1|0.27|ENSG00000083857|chr4:186611556-186611556|G/-|frameshift_variant;FAT1|p.P4313Lfs*36|1|0.34|ENSG00000083857|chr4:186596602-186596602|G/-|frameshift_variant;FAT1|p.Q2933Hfs*14|1|0.33|ENSG00000083857|chr4:186617787-186617788|-/G|frameshift_variant	26.69291269510374	0.34280015626154364	3				NaN	NaN	0	NaN	7482	5294	12777
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12786	37.869	NaN	2303.8	30	0	197.28	0.213				-1	 	0	67	600.2907318934524	1198.5669108537047	2	600.7921142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7484	5300	12785
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12787	37.873	NaN	1307.5	30	0	193.28	0.034	+			465	AAVPRAAFL	9	47	458.2745368926048	914.5345208520096	2	458.27386474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAVPRAAFL_	ENSG00000089248|ENST00000261735|ERP29;ENST00000553161.1_1_12:112451251-112452397:+|nuORF;nc|ENSG00000089248|P30040-2|ERP29	40.5726180659479	0.4135428067754104	3				NaN	NaN	0	NaN	7485	5300	12785
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12794	37.889	NaN	1981.5	30	0	414.6	0.214	+			4203	ATFTNVFGK	9	43	492.76168699430656	983.5088210554131	2	492.7606506347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATFTNVFGK_	ENSG00000131503|ENST00000360839|ANKHD1;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	39.252832667884924	0.4290233611298554	3				NaN	NaN	0	NaN	7489	5303	12793
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12795	37.893	NaN	1985.5	30	0	75.426	0.106	+			167	AAIVAYGLYK	10	58	534.8092580616675	1067.603963190135	2	535.31103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAIVAYGLYK_	ENSG00000181061|ENST00000321331|HIGD1A;ENST00000470543.1_1_3:42826765-42845976:-|nuORF;nc|ENSG00000181061|Q9Y241-2|HIGD1A	63.30626980617807	0.33577009411590547	3				NaN	NaN	0	NaN	7490	5303	12793
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12796	37.895	NaN	4019.3	30	0	814.76	0.049				-1	 	0	77	652.0268411226829	1953.0586939682485	3	652.0280151367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7491	5303	12793
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12801	37.909	NaN	1921.4	30	0	183.44	0.143			+	46935	VIYLIRDT	8	65	496.79299016724445	991.5714274012889	2	497.293701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VIYLIRDT_	REV__ENSG00000263201|ENST00000574912|DPEP2NB	33.51558372728122	0.7005509609380386	3				NaN	NaN	0	NaN	7493	5306	12800
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12805	37.925	NaN	1313.1	30	0	155.87	0.142			+	-1	PLYCVIAP	8	49	466.74891315331337	NaN	0	466.7485656738281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_PLYC(Carbamidomethyl (C))VIAP_	REV__ENST00000455843.5_1_22:19710827-19711067:+|nuORF;REV__nc|ENSG00000203618|P13224-2|GP1BB	33.49298260027079	1.7418937515398478	3				NaN	NaN	0	NaN	7494	5309	12804
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12809	37.941	NaN	3011	30	0	392.48	0.214	+			47273	VMTGSYNNF	9	64	516.7266220093153	1031.4386910854305	2	516.726318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VMTGSYNNF_	ABHD12-PPP2R2A|1|fusion;ENSG00000221914|ENST00000380737|PPP2R2A;ENST00000517754.1_1_8:26221160-26227926:+|nuORF;nc|ENSG00000221914|P63151-2|PPP2R2A	72.87924865735499	0.12833875048249987	3				NaN	NaN	0	NaN	7495	5312	12808
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12810	37.945	NaN	1637.4	30	0	163.87	0.034	+			8284	EAIGAVIHY	9	57	486.7614095673415	971.508266201483	2	486.7613830566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EAIGAVIHY_	ENSG00000020129|ENST00000373243|NCDN;nc|ENSG00000020129|Q9UBB6-2|NCDN	54.76467175910256	0.25725661233076036	3				NaN	NaN	0	NaN	7496	5312	12808
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12815	37.959	NaN	4182.5	30	0	353.92	0.214	+			30781	QDVLGIRQL	9	61	521.3063440577043	1040.5981351822086	2	521.3067016601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QDVLGIRQL_	ENSG00000056972|ENST00000368761|TRAF3IP2;ENST00000528599.1_1_6:111894079-111913289:-|nuORF;ENST00000532708.5_1_6:111888790-111922417:-|nuORF;nc|ENSG00000056972|O43734-5|TRAF3IP2;nc|ENSG00000056972|O43734|TRAF3IP2	109.43880257439609	0.029570636687953285	3				NaN	NaN	0	NaN	7498	5315	12814
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12816	37.963	NaN	2081.5	30	0	206.92	0.106	+			244	AAMLDTVVFK	10	57	555.7975754926794	1109.5805980521586	2	555.7975463867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_AAM(Oxidation (M))LDTVVFK_	ENSG00000115233|ENST00000409682|PSMD14;ENST00000477232.5_1_2:162241962-162267908:+|nuORF;ENST00000492908.1_1_2:162265323-162267908:+|nuORF	51.19269402634007	0.44601001148513897	3				NaN	NaN	0	NaN	7499	5315	12814
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12817	37.965	NaN	998.26	30	0	332.5	0.034	+			27049	MAAPLAYPN	9	41	474.23515109857624	946.4557492639525	2	474.2344665527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MAAPLAYPN_	ENSG00000173065|ENST00000581407|FAM222B	28.2542754592877	0.5391964248700117	3				NaN	NaN	0	NaN	7500	5315	12814
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12822	37.979	NaN	1185.6	30	0	89.367	0.214			+	10114	ESLVSKLL	8	48	444.773169869767	NaN	0	444.77349853515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ESLVSKLL_	REV__L1PA8_dup4178|chr8:94121319-94127043:-|4.057818296907117|0.2856926403965029|3.83|481.0|345|3|anti-sense	71.29570347882199	1.7418937515398478	3				NaN	NaN	0	NaN	7502	5318	12821
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12823	37.982	NaN	1447.5	30	0	188.88	0.033	+			10708	FAALHGPAL	9	45	448.7531872064541	895.4918214797082	2	448.7527770996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FAALHGPAL_	ENSG00000100304|ENST00000216129|TTLL12	72.61992398637584	0.12946007194610515	3				NaN	NaN	0	NaN	7503	5318	12821
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12832	38.013	NaN	1415.1	30	0	73.114	0.214	+			2116	ALGTVALALAA	11	49	485.80057541753087	969.5865979018618	2	485.800048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ALGTVALALAA_	ENSG00000148343|ENST00000684074|MIGA2;ENST00000474534.1_1_9:131798902-131809484:+|nuORF;nc|ENSG00000148343|Q7L4E1-2|MIGA2;nc|ENSG00000148343|Q7L4E1-3|MIGA2	53.351449002276354	0.38280258784255455	3				NaN	NaN	0	NaN	7506	5324	12831
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12833	38.016	NaN	1597	30	0	319.41	0.106	+			38551	SSFELIVQK	9	58	525.7951455136179	1049.5757380940356	2	525.7952270507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSFELIVQK_	ENSG00000108424|ENST00000290158|KPNB1;nc|ENSG00000108424|Q14974-2|KPNB1	62.107414245175825	0.1960472003779324	3				NaN	NaN	0	NaN	7507	5324	12831
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12834	38.018	NaN	1377.3	30	0	135.09	0.037			+	-1	GRRGGMQEML	10	56	575.7749040166337	1149.5352551000674	2	575.7759399414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_GRRGGMQEM(Oxidation (M))L_	REV__ENSG00000182944|ENST00000397938|EWSR1;REV__ENST00000469669.5_1_22:29688055-29696148:+|nuORF;REV__ENST00000479135.5_1_22:29687437-29696148:+|nuORF;REV__ENST00000483629.5_1_22:29695128-29696148:+|nuORF;REV__nc|ENSG00000182944|Q01844-2|EWSR1;REV__nc|ENSG00000182944|Q01844-3|EWSR1;REV__nc|ENSG00000182944|Q01844-5|EWSR1;REV__nc|ENSG00000182944|Q01844-6|EWSR1	31.529811441608018	0.6223461015008678	3				NaN	NaN	0	NaN	7508	5324	12831
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12838	38.033	NaN	1491.5	30	0	92.125	0.214			+	18545	ISMEFVWLA	9	65	548.282391699718	1094.550230466236	2	548.2821044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ISMEFVWLA_	REV__ENST00000297107.10_1_5:153797146-153797353:+|nuORF	40.5726180659479	0.4135428067754104	3				NaN	NaN	0	NaN	7509	5327	12837
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12839	38.036	NaN	1549.8	30	0	249.82	0.035	+			25224	LMVMVLLAGA	10	57	509.2955458622372	1016.5765387912744	2	509.2943115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LMVMVLLAGA_	ENSG00000184574|ENST00000329858|LPAR5	44.53106598305862	0.5073935772121767	3				NaN	NaN	0	NaN	7510	5327	12837
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12843	38.05	NaN	1470.4	30	0	100.28	0.144	+			46881	VIMRPGNKY	9	57	539.2953491210938	NaN	0	539.2953491210938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VIMRPGNKY_	ENSG00000265972|ENST00000582401|TXNIP;nc|ENSG00000265972|Q9H3M7-2|TXNIP	55.50420428727701	0.16876052142120426	3				NaN	NaN	0	NaN	7511	5330	12842
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12847	38.067	NaN	1658.8	30	0	105.39	0.214	+			14302	GSYDPQQIFK	10	66	591.7938930013948	1181.5732330695896	2	591.7933349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSYDPQQIFK_	ENSG00000131653|ENST00000326181|TRAF7;nc|ENSG00000131653|Q6Q0C0-2|TRAF7	68.84614121027924	0.2867470276772903	3				NaN	NaN	0	NaN	7512	5333	12846
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12848	38.07	NaN	1490.6	30	0	203.73	0.034	+			47830	VSKTLALPL	9	52	471.30448337219497	NaN	0	471.30462646484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSKTLALPL_	ENSG00000137463|ENST00000398955|MGARP	27.882242232435846	0.3367954786602879	3				NaN	NaN	0	NaN	7513	5333	12846
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12852	38.085	NaN	2152.3	30	0	213.91	0.142	+			221	AALSYVLCK	9	65	484.2682218561555	966.521890779111	2	484.2680358886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AALSYVLCK_	ENSG00000161921|ENST00000293778|CXCL16	49.44154591367651	0.3095138337212152	3				NaN	NaN	0	NaN	7514	5336	12851
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12865	38.133	NaN	3388.3	30	0	446.89	0.214	+			46652	VGDPSVHLL	9	65	468.76162350592165	935.5086940786433	2	468.7605285644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VGDPSVHLL_	ENSG00000099364|ENST00000338343|FBXL19;nc|ENSG00000099364|Q6PCT2-2|FBXL19;nc|ENSG00000099364|Q6PCT2-3|FBXL19;nc|ENSG00000099364|Q6PCT2|FBXL19	60.97194046774394	0.20551255781574032	3				NaN	NaN	0	NaN	7518	5345	12864
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12866	38.136	NaN	2062.9	30	0	248.11	0.106			+	37693	SLSLFSGLR	9	53	490.28263175533755	978.5507105774751	2	490.28131103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLSLFSGLR_	REV__ENST00000465826.5_1_3:12628841-12633220:-|nuORF	47.657333605630114	0.33044192980041115	3				NaN	NaN	0	NaN	7519	5345	12864
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12867	38.138	NaN	1525.4	30	0	147.08	0.106	+			46874	VILLPQPPK	9	52	502.8286155495016	NaN	0	502.8284912109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VILLPQPPK_	AluSp_dup12528|chr4:108625371-108625684:-|1.1205789574276814|0.0295741133308953|5.24|467.0|19|3|anti-sense;ENST00000499522.6_1_8:104178449-104258641:-|nuORF;ENST00000573538.5_2_16:67974380-67976796:-|nuORF;ENST00000602743.1_1_17:13801940-13972716:-|nuORF;nc|ENSG00000050628|P43115-12|PTGER3	55.50420428727701	0.16876052142120426	3				NaN	NaN	0	NaN	7520	5345	12864
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12868	38.14	NaN	1239.4	30	0	127.46	0.106	+			35688	SDILIHGM	8	44	443.2280321070311	NaN	0	443.2279052734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SDILIHGM_	DIS3L|p.L414*|1|0.42|ENSG00000166938|chr15:66320644-66320644|T/-|frameshift_variant;ENSG00000166938|ENST00000319212|DIS3L;ENST00000524795.5_1_15:66587446-66615029:+|nuORF;ENST00000564909.5_1_15:66585934-66618751:+|nuORF;ENST00000565281.5_1_15:66585934-66615040:+|nuORF;nc|ENSG00000166938|Q8TF46-2|DIS3L;nc|ENSG00000166938|Q8TF46-3|DIS3L;nc|ENSG00000166938|Q8TF46-4|DIS3L	44.53106598305862	1.7418937515398478	3				NaN	NaN	0	NaN	7521	5345	12864
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12869	38.142	NaN	772.48	30	0	125.19	0.106				-1	ASMKKVKSL	9	32	336.53429750028755	NaN	0	336.5343933105469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_ASM(Oxidation (M))KKVKSL_	ENST00000369426.9_1_1:119575536-119588262:-|nuORF	20.94693142431847	0.3660861156085067	3				NaN	NaN	0	NaN	7522	5345	12864
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12870	38.144	NaN	1447.6	30	0	117.9	0.106			+	11319	FLAFLGFTGF	10	58	560.294965942568	NaN	0	560.2949829101562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FLAFLGFTGF_	REV__L1MB8_dup3477|chr3:193839654-193840532:-|1.6485885596924217|0.3003449133866926|2.46|479.0|51|3|anti-sense	37.15910966729921	0.3781637092648983	3				NaN	NaN	0	NaN	7523	5345	12864
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12871	38.145	NaN	1614.7	30	0	337.62	0.036	+			44519	TSTPLSSPVY	10	58	526.2684326171875	NaN	0	526.2684326171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TSTPLSSPVY_	ENSG00000107829|ENST00000331272|FBXW4;ENST00000470093.5_1_10:103371050-103384578:-|nuORF;nc|ENSG00000107829|P57775|FBXW4	42.396135135203025	0.3536752194735987	3				NaN	NaN	0	NaN	7524	5345	12864
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12876	38.16	NaN	1815.7	30	0	257.54	0.214	+			43680	TKEEFTKM	8	58	507.2531062750594	1012.4916596169188	2	507.2530212402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TKEEFTKM_	ENSG00000129515|ENST00000362031|SNX6;ENST00000556303.1_1_14:35074800-35099358:-|nuORF;ENST00000601728.1_1_19:23310047-23310578:-|nuORF;nc|ENSG00000129515|Q9UNH7-2|SNX6;SNX6|p.N346Ifs*30|1|0.21|ENSG00000129515|chr14:34567934-34567934|T/-|frameshift_variant	30.317721548370564	0.7252424349988982	3				NaN	NaN	0	NaN	7526	5348	12875
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12877	38.163	NaN	1399.3	30	0	108.87	0.036			+	-1	LSLYCVISM	9	62	551.2682012319879	1100.5218495307756	2	551.2691040039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_LSLYC(Carbamidomethyl (C))VISM(Oxidation (M))_	REV__ENSG00000174669|ENST00000357440|SLC29A2;REV__nc|ENSG00000174669|Q14542-3|SLC29A2;REV__nc|ENSG00000174669|Q14542-4|SLC29A2	37.15910966729921	0.4535818937225704	3				NaN	NaN	0	NaN	7527	5348	12875
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12882	38.178	NaN	1988.4	30	0	104.3	0.214				-1	TDVVTETCM	9	60	536.2210693359375	NaN	0	536.2210693359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_TDVVTETC(Carbamidomethyl (C))M(Oxidation (M))_	ENSG00000077264|ENST00000372007|PAK3;ENSG00000149269|ENST00000356341|PAK1;ENSG00000180370|ENST00000327134|PAK2;ENST00000532711.1_1_11:77047303-77054976:-|nuORF;nc|ENSG00000077264|O75914-3|PAK3;nc|ENSG00000077264|O75914-4|PAK3;nc|ENSG00000077264|O75914|PAK3;nc|ENSG00000149269|Q13153-2|PAK1;PAK2|p.R488Gfs*13|1|0.32|ENSG00000180370|chr3:196827302-196827302|A/-|frameshift_variant;PAK2|p.S371Vfs*67|1|0.31|ENSG00000180370|chr3:196818111-196818111|A/-|frameshift_variant	44.116797842482775	0.2472372736944149	3				NaN	NaN	0	NaN	7529	5351	12881
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12883	38.181	NaN	1868	30	0	126.42	0.036	+			1825	AIIDHIFASK	10	60	557.8164829875074	NaN	0	557.8175659179688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AIIDHIFASK_	ENSG00000152332|ENST00000489294|UHMK1;nc|ENSG00000152332|Q8TAS1-2|UHMK1;nc|ENSG00000152332|Q8TAS1-3|UHMK1	32.75053402867276	0.3926392905881664	3				NaN	NaN	0	NaN	7530	5351	12881
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12887	38.196	NaN	3962.1	30	0	436.11	0.214	+			28101	NAFKEITTM	9	65	527.7653664904647	1053.5161800477292	2	527.7665405273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAFKEITTM_	ENSG00000137947|ENST00000370500|GTF2B;ENST00000486078.1_1_1:89325774-89329699:-|nuORF;ENST00000494819.5_1_1:89324456-89357188:-|nuORF	118.74307786436346	0.02196067127630568	3				NaN	NaN	0	NaN	7531	5354	12886
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12888	38.2	NaN	4375.1	30	0	782.83	0.106	+			15204	GTSSLFIYK	9	66	508.27778179995084	1014.5410106667017	2	508.27862548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTSSLFIYK_	BBS10|p.K620Nfs*12|1|0.5|ENSG00000179941|chr12:76346125-76346125|T/-|frameshift_variant;ENSG00000179941|ENST00000650064|BBS10	42.86426827375447	0.38666266728046506	3				NaN	NaN	0	NaN	7532	5354	12886
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12889	38.202	NaN	2265.1	30	0	357.41	0.036	+			50865	YFAERVTSL	9	58	543.2857582126371	1084.5569634920741	2	543.2849731445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YFAERVTSL_	ENSG00000213145|ENST00000392531|CRIP1	60.11826168202944	0.21262886028301267	3				NaN	NaN	0	NaN	7533	5354	12886
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12894	38.216	NaN	3254.9	30	0	339.19	0.213				-1	 	0	68	600.2907318934524	1198.5669108537047	2	600.2899780273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7535	5357	12893
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12895	38.219	NaN	1827.7	30	0	307.82	0.106			+	27640	MPRACLKPD	9	56	515.7622101831682	1029.5098674331364	2	515.76171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MPRACLKPD_	REV__ENSG00000255582|ENST00000542433|OR10G2	60.97194046774394	0.20551255781574032	3				NaN	NaN	0	NaN	7536	5357	12893
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12896	38.221	NaN	1261.9	30	0	102.51	0.034	+			34730	RWAGLPRP	8	53	476.777190810288	951.539828687376	2	476.7753601074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RWAGLPRP_	ENST00000497512.5_1_4:78078410-78106259:+|nuORF	40.5726180659479	0.6527593143185008	3				NaN	NaN	0	NaN	7537	5357	12893
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12901	38.235	NaN	2379.3	30	0	497.83	0.142			+	38036	SPPLPRVY	8	53	464.76650795148146	927.5184629697629	2	464.76702880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SPPLPRVY_	REV__ENSG00000175105|ENST00000636215|ZNF654	25.450171626174864	0.7628259754767981	3				NaN	NaN	0	NaN	7539	5360	12900
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12905	38.252	NaN	2379.4	30	0	370.38	0.214			+	-1	TSSMTIVIK	9	60	498.2745961536475	994.534639374095	2	498.27459716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_TSSM(Oxidation (M))TIVIK_	REV__ENSG00000135749|ENST00000258229|PCNX2	39.252832667884924	0.4290233611298554	3				NaN	NaN	0	NaN	7540	5363	12904
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12906	38.256	NaN	1226.5	30	0	83.031	0.034	+			24037	LEFSATKL	8	45	454.75795060143355	NaN	0	454.7579345703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LEFSATKL_	ENSG00000136628|ENST00000366923|EPRS1	40.77816245573522	1.7418937515398478	3				NaN	NaN	0	NaN	7541	5363	12904
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12910	38.269	NaN	4342.4	30	0	517.03	0.214	+			3218	ASLADIMAK	9	61	460.2496121828777	918.4846714325554	2	460.24981689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASLADIMAK_	ENSG00000114391|ENST00000394077|RPL24;ENST00000446071.1_1_9:72832122-72832404:+|nuORF	112.41091882917199	0.026537921851008135	3				NaN	NaN	0	NaN	7542	5366	12909
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12911	38.273	NaN	2022.6	30	0	376.73	0.106	+			17502	IDFTGHAL	8	53	437.2271376014053	872.4397222696106	2	437.2269287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IDFTGHAL_	ENSG00000057608|ENST00000380191|GDI2;ENSG00000203879|ENST00000447750|GDI1;ENST00000491154.1_1_X:153666748-153668487:+|nuORF;GDI2|p.S222Afs*20|1|0.1|ENSG00000057608|chr10:5785197-5785197|T/-|frameshift_variant;nc|ENSG00000057608|P50395-2|GDI2	47.91560031466742	0.6071945918984287	3				NaN	NaN	0	NaN	7543	5366	12909
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12912	38.275	NaN	1654.6	30	0	141.68	0.106				-1	NYSTCQILK	9	62	563.7824096679688	NaN	0	563.7824096679688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_NYSTC(Carbamidomethyl (C))QILK_	tr|U7SSY7|U7SSY7_FUSNUHeptose(II)phosphotransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01643PE=4SV=1	42.396135135203025	0.2590952873412954	3				NaN	NaN	0	NaN	7544	5366	12909
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12913	38.277	NaN	1939.1	30	0	307.76	0.106	+			14928	GTMEWIMIK	9	56	570.7747347218085	NaN	0	570.775390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Oxidation (M)	_GTM(Oxidation (M))EWIM(Oxidation (M))IK_	ENSG00000168273|ENST00000477703|UQCC5	77.31757898189308	0.08057531075035683	3				NaN	NaN	0	NaN	7545	5366	12909
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12914	38.278	NaN	1257.3	30	0	120.61	0.035			+	40852	SVFAEARLL	9	62	503.28802490234375	NaN	0	503.28802490234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVFAEARLL_	REV__EME1|p.K470Rfs*11|1|0.39|ENSG00000154920|chr17:50380373-50380373|A/-|frameshift_variant;REV__ENSG00000154920|ENST00000338165|EME1;REV__ENST00000510007.5_1_17:48453495-48456929:+|nuORF;REV__ENST00000513077.1_1_17:48453476-48456929:+|nuORF;REV__nc|ENSG00000154920|Q96AY2-2|EME1	34.172542307311794	0.30503706118289736	3				NaN	NaN	0	NaN	7546	5366	12909
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12919	38.293	NaN	3843	30	0	625.05	0.214				-1	 	0	65	494.76675198429234	987.5189510353847	2	494.7658996582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7548	5369	12918
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12920	38.296	NaN	1599.6	30	0	386.01	0.106	+			26734	LVLNCSTK	8	57	488.76064595466454	975.5067389761291	2	488.7599792480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))LVLNC(Carbamidomethyl (C))STK_	ENSG00000203972|ENST00000371197|GLYATL3	40.5726180659479	0.6527593143185008	3				NaN	NaN	0	NaN	7549	5369	12918
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12921	38.298	NaN	1338.5	30	0	149.58	0.036				-1	TAAGCPQRRG	10	58	537.2687866185853	NaN	0	537.2684936523438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_TAAGC(Carbamidomethyl (C))PQRRG_	ENST00000445747.1_1_X:118011894-118012802:-|nuORF	34.172542307311794	0.38797011891751465	3				NaN	NaN	0	NaN	7550	5369	12918
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12927	38.314	NaN	7427.8	30	0	2327.2	0.214	+			12732	GEKVDFNTF	9	67	528.7542119213948	1055.4938709095895	2	528.754150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEKVDFNTF_	ENSG00000176153|ENST00000389614|GPX2;GPX2|p.W152*|1|0.31|ENSG00000176153|chr14:64939605-64939605|C/-|frameshift_variant	104.01359247289065	0.03510646158778409	3				NaN	NaN	0	NaN	7553	5372	12926
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12928	38.318	NaN	1247.1	30	0	246.71	0.034	+			35964	SEGTFGIHV	9	48	473.73557104927863	945.4565891653573	2	473.7334899902344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEGTFGIHV_	ENSG00000088888|ENST00000428216|MAVS;nc|ENSG00000088888|Q7Z434-4|MAVS	60.29395666154354	0.21116425950210296	3				NaN	NaN	0	NaN	7554	5372	12926
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12932	38.333	NaN	1775.8	30	0	182.16	0.143	+			49495	VVYVGGILTK	10	48	524.8242593194401	1047.63396570568	2	524.824951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVYVGGILTK_	ENSG00000174607|ENST00000310836|UGT8	42.396135135203025	0.5270658956260207	3				NaN	NaN	0	NaN	7555	5375	12931
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12936	38.349	NaN	1903.8	30	0	161	0.214			+	24297	LFDAAMRGAL	10	60	532.7814859194856	1063.548418905771	2	532.7811889648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LFDAAMRGAL_	REV__ENST00000547318.5_1_12:51451861-51453147:+|nuORF	51.19269402634007	0.44601001148513897	3				NaN	NaN	0	NaN	7556	5378	12935
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12937	38.352	NaN	2267.4	30	0	685.39	0.047				-1	 	0	57	610.9802912887678	1829.9190444665032	3	610.979736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7557	5378	12935
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12943	38.369	NaN	2066.8	30	0	247.35	0.214	+			14777	GTLAEFIQK	9	54	503.78169647627215	NaN	0	503.7818908691406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTLAEFIQK_	ENSG00000160602|ENST00000268766|NEK8;ENST00000584342.5_1_17:27052953-27062286:+|nuORF;ENST00000593261.1_1_17:27055855-27062286:+|nuORF	42.86426827375447	0.2558691296974908	3				NaN	NaN	0	NaN	7560	5381	12942
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12944	38.372	NaN	4220.9	30	0	315.1	0.106	+			11943	FVIETARQL	9	66	538.8094899505999	1075.6044269679996	2	538.8084716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FVIETARQL_	ENSG00000119669|ENST00000238647|IRF2BPL;ENSG00000168264|ENST00000366609|IRF2BP2;IRF2BP2|p.K554Nfs*26|1|0.21|ENSG00000168264|chr1:234607239-234607239|T/-|frameshift_variant;IRF2BPL|p.G195Afs*17|1|0.33|ENSG00000119669|chr14:77027209-77027209|C/-|frameshift_variant;IRF2BPL|p.G244Vfs*101|1|0.32|ENSG00000119669|chr14:77027062-77027062|C/-|frameshift_variant;IRF2BPL|p.L713Sfs*54|1|0.54|ENSG00000119669|chr14:77025656-77025656|G/-|frameshift_variant;nc|ENSG00000168264|Q7Z5L9-2|IRF2BP2	68.84614121027924	0.14577793175421136	3				NaN	NaN	0	NaN	7561	5381	12942
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12945	38.374	NaN	1936.3	30	0	96.152	0.037	+			18453	ISEENFRVM	9	69	562.7744578777731	1123.534362822346	2	562.7734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ISEENFRVM_	ENSG00000138160|ENST00000260731|KIF11;KIF11|p.K673Rfs*3|1|0.12|ENSG00000138160|chr10:92637397-92637397|A/-|frameshift_variant	37.81151784470057	0.4459294069877048	3				NaN	NaN	0	NaN	7562	5381	12942
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12949	38.388	NaN	2575.7	30	0	346.79	0.145			+	-1	EYLKTCQHA	9	58	575.2707164134008	1148.5268798936015	2	575.2692260742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_EYLKTC(Carbamidomethyl (C))QHA_	REV__ENC1|p.G499Vfs*26|1|0.12|ENSG00000171617|chr5:74634990-74634990|C/-|frameshift_variant;REV__ENC1|p.R348Gfs*39|1|0.42|ENSG00000171617|chr5:74635445-74635445|C/-|frameshift_variant;REV__ENC1|p.S350Lfs*37|1|0.18|ENSG00000171617|chr5:74635439-74635439|C/-|frameshift_variant;REV__ENSG00000171617|ENST00000302351|ENC1;REV__nc|ENSG00000171617|O14682-2|ENC1	39.252832667884924	0.4290233611298554	3				NaN	NaN	0	NaN	7563	5384	12948
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12953	38.404	NaN	2503.7	30	0	234.11	0.214			+	7680	DLFLKNGLA	9	61	495.7854717555721	989.5563905779442	2	495.78411865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DLFLKNGLA_	REV__FAM217B|p.S71L|1|0.11|ENSG00000196227|chr20:59944155-59944155|C/T|missense_variant	67.49366992349736	0.1516260258713357	3				NaN	NaN	0	NaN	7564	5387	12952
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12954	38.407	NaN	3575.1	30	0	766.79	0.106	+			31497	QLEIWHRNRMD	11	71	749.373279582103	NaN	0	749.3719482421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QLEIWHRNRMD_	APLP2|p.R400W|1|0.09|ENSG00000084234|chr11:130126807-130126807|C/T|missense_variant	24.519189625965996	0.45614437233802635	3				NaN	NaN	0	NaN	7565	5387	12952
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12955	38.409	NaN	1089.5	30	0	80.547	0.035				-1	ALMPSCIII	9	51	509.27752671665706	NaN	0	509.27801513671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_ALMPSC(Carbamidomethyl (C))III_	KCNA4|p.F221Lfs*21|5|0.36|ENSG00000182255|chr11:30012016-30012016|A/-|frameshift_variant	33.51558372728122	0.30835390848773375	3				NaN	NaN	0	NaN	7566	5387	12952
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12959	38.423	NaN	3986	30	0	455.23	0.214	+			37261	SLADFQIEK	9	72	525.7788722937172	NaN	0	525.7788696289062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLADFQIEK_	ENSG00000119408|ENST00000320246|NEK6;nc|ENSG00000119408|Q9HC98-2|NEK6;nc|ENSG00000119408|Q9HC98-3|NEK6;nc|ENSG00000119408|Q9HC98-4|NEK6	80.91624569148213	0.06824414073816605	3				NaN	NaN	0	NaN	7567	5390	12958
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12960	38.427	NaN	1140.1	30	0	48.775	0.106	+			19160	IYQLNIQI	8	53	502.79339599609375	NaN	0	502.79339599609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IYQLNIQI_	DENND5A|p.K895Sfs*7|2|0.23|ENSG00000184014|chr11:9150132-9150132|T/-|frameshift_variant;DENND5A|p.L896Vfs*14|1|0.2|ENSG00000184014|chr11:9150131-9150132|-/T|frameshift_variant;ENSG00000184014|ENST00000328194|DENND5A;nc|ENSG00000184014|Q6IQ26-2|DENND5A	26.79610172149135	1.7418937515398478	3				NaN	NaN	0	NaN	7568	5390	12958
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12961	38.429	NaN	3401.3	30	0	741.05	0.049	+			31498	QLEIWHRNRMD	11	70	749.373279582103	NaN	0	749.0410766601562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QLEIWHRNRMD_	APLP2|p.R400W|1|0.09|ENSG00000084234|chr11:130126807-130126807|C/T|missense_variant	29.170058357718403	0.43541742044178583	3				NaN	NaN	0	NaN	7569	5390	12958
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12967	38.443	NaN	4102.4	30	0	1728	0.214	+			15267	GTTITLVLK	9	53	473.30345979989943	944.5923666665989	2	473.3030090332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTTITLVLK_	ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF;ENST00000559111.1_1_15:99798356-99798647:+|nuORF	28.081489160057373	0.5408112046645406	3				NaN	NaN	0	NaN	7572	5393	12966
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12968	38.447	NaN	1763	30	0	176.37	0.106	+			14115	GSLNWVPVTK	10	61	550.8091678519057	1099.6037827706114	2	550.810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSLNWVPVTK_	ENSG00000196188|ENST00000358184|CTSE;nc|ENSG00000196188|P14091-2|CTSE;nc|ENSG00000196188|P14091-3|CTSE	42.242577148874844	0.5284808555555522	3				NaN	NaN	0	NaN	7573	5393	12966
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12969	38.449	NaN	1546.2	30	0	214.94	0.106	+			12572	GEGRVGIIL	9	54	457.27721162622197	912.539870319244	2	457.2768859863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEGRVGIIL_	CFTR|p.G1208Afs*3|1|0.3|ENSG00000001626|chr7:117627672-117627672|G/-|frameshift_variant;CFTR|p.L1258Ffs*7|1|0.26|ENSG00000001626|chr7:117642487-117642488|-/T|frameshift_variant;CFTR|p.S1297Lfs*31|1|0.28|ENSG00000001626|chr7:117652852-117652852|T/-|frameshift_variant;ENSG00000001626|ENST00000003084|CFTR;nc|ENSG00000001626|P13569-2|CFTR	54.776311868738084	0.25715957988447635	3				NaN	NaN	0	NaN	7574	5393	12966
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12970	38.451	NaN	1894.4	30	0	124.09	0.034	+			45793	VAGVLAHVY	9	59	464.76650795148146	927.5184629697629	2	464.7664794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VAGVLAHVY_	ENSG00000110900|ENST00000546076|TSPAN11	29.841539824830324	0.5243625958137083	3				NaN	NaN	0	NaN	7575	5393	12966
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12974	38.465	NaN	1561.8	30	0	169.42	0.214	+			33164	RETPGAADPK	10	65	521.2720287406421	NaN	0	521.272216796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RETPGAADPK_	ENST00000268485.7_1_16:71660520-71668122:+|nuORF;ENST00000299952.4_1_16:71660520-71674304:+|nuORF	33.921630207806714	0.38879399011744475	3				NaN	NaN	0	NaN	7576	5396	12973
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12975	38.468	NaN	1806	30	0	369.89	0.036				-1	MFPGKWKM	8	67	528.7542119213948	1055.4938709095895	2	529.257568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Oxidation (M)	_M(Oxidation (M))FPGKWKM(Oxidation (M))_	ENST00000427130.6_1_8:59535830-59536311:-|nuORF	28.2542754592877	0.7411748056684583	3				NaN	NaN	0	NaN	7577	5396	12973
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12979	38.482	NaN	2959.8	30	0	704.58	0.214	+			46403	VENIFSRIVD	10	62	596.3219437918378	1190.6293346504756	2	596.3216552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VENIFSRIVD_	ENSG00000115904|ENST00000402219|SOS1;nc|ENSG00000115904|Q07889-2|SOS1;SOS1|p.F494Vfs*9|1|0.13|ENSG00000115904|chr2:39022949-39022950|-/T|frameshift_variant;SOS1|p.I742Lfs*24|1|0.08|ENSG00000115904|chr2:39012292-39012292|T/-|frameshift_variant;SOS1|p.K1030Nfs*6|1|0.34|ENSG00000115904|chr2:38995379-38995379|T/-|frameshift_variant;SOS1|p.L339Tfs*16|1|0.39|ENSG00000115904|chr2:39035270-39035271|AA/-|frameshift_variant	26.063383197487333	0.6669871633831898	3				NaN	NaN	0	NaN	7578	5399	12978
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12980	38.486	NaN	2068.4	30	0	172.15	0.106				-1	PMRKCVSL	8	60	495.76630675628985	989.5180605793797	2	495.7660827636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_PMRKC(Carbamidomethyl (C))VSL_	ENST00000462733.5_1_17:17919314-17919425:-|nuORF	44.116797842482775	0.6307669463330267	3				NaN	NaN	0	NaN	7579	5399	12978
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12981	38.488	NaN	928.57	30	0	102.95	0.032				-1	 	0	31	389.73903004912904	NaN	0	389.73919677734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7580	5399	12978
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12986	38.502	NaN	1860.4	30	0	260.25	0.214			+	26982	LYLYNDIF	8	56	530.7692715426033	1059.5239901520065	2	530.7694091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LYLYNDIF_	REV__tr|U7STY6|U7STY6_FUSNURNApolymerasesigmafactor54core-bindingdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01233PE=4SV=1	65.80317337860623	0.44433089765398776	3				NaN	NaN	0	NaN	7582	5402	12985
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12987	38.506	NaN	1190.1	30	0	184.24	0.035	+			50883	YFLYLPVA	8	46	493.27167351050804	984.5287940878161	2	493.271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YFLYLPVA_	ENSG00000121871|ENST00000475390|SLITRK3	33.49298260027079	0.7007254697536482	3				NaN	NaN	0	NaN	7583	5402	12985
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12991	38.52	NaN	1667.8	30	0	243.27	0.212	+			718	AEATICTKLMK	11	69	641.328369140625	NaN	0	641.328369140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_AEATIC(Carbamidomethyl (C))TKLM(Oxidation (M))K_	nc|ENSG00000100614|P35813-3|PPM1A	83.6470233535746	0.06439060931933731	3				NaN	NaN	0	NaN	7584	5405	12990
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12992	38.524	NaN	1154.3	30	0	109.8	0.036			+	6836	CIGVAQYILS	10	56	533.7839688633643	NaN	0	533.78466796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_CIGVAQYILS_	REV__nc|ENSG00000090539|Q9H2X0-5|CHRD	35.61828744233558	0.3832230071539346	3				NaN	NaN	0	NaN	7585	5405	12990
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12996	38.538	NaN	1817	30	0	209.71	0.214	+			23407	LAANGADLSI	10	55	472.7563635785586	943.4981742239172	2	472.7549743652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LAANGADLSI_	ENSG00000101752|ENST00000261537|MIB1;MIB1-MYO5B|1|fusion	65.46538089061403	0.31613324008013116	3				NaN	NaN	0	NaN	7586	5408	12995
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12997	38.542	NaN	796.75	30	0	162.45	0.106	+			48070	VSSQGGQTY	9	43	463.71606620470874	NaN	0	463.7158203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSSQGGQTY_	ENSG00000167600|ENST00000310054|CYP2S1;nc|ENSG00000167600|Q96SQ9-2|CYP2S1	37.15910966729921	0.2899585034171616	3				NaN	NaN	0	NaN	7587	5408	12995
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12998	38.544	NaN	1620.6	30	0	297.31	0.039	+			50213	WMVNGLCKKAL	11	61	631.8408575524786	1261.6671621717571	2	631.8405151367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_WMVNGLCKKAL_	ENST00000368841.6_1_1:151666084-151666249:+|nuORF	20.94693142431847	0.7700749696703488	3				NaN	NaN	0	NaN	7588	5408	12995
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13002	38.559	NaN	1724.4	30	0	161.22	0.145				-1	 	0	62	600.2907318934524	1198.5669108537047	2	600.2911987304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7589	5411	13001
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13006	38.575	NaN	2456.1	30	0	277.18	0.143			+	-1	GLKRWMCI	8	62	511.7676452493959	1021.5207375655918	2	511.76776123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_GLKRWM(Oxidation (M))CI_	REV__ENST00000463033.1_1_22:17639549-17639678:-|nuORF	37.028477286268924	0.6747514403204248	3				NaN	NaN	0	NaN	7590	5414	13005
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13010	38.591	NaN	850.75	30	0	166	0.214	+			30104	PRHMRVVL	8	26	336.534310005537	NaN	0	336.5343322753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PRHMRVVL_	ENST00000265044.6_1_3:156260346-156260379:-|nuORF	23.036711822280957	1.7418937515398478	3				NaN	NaN	0	NaN	7591	5417	13009
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13011	38.595	NaN	1838.8	30	0	254.97	0.037	+			45653	TYSYGLGSCVK	11	70	589.2803434116236	NaN	0	589.2805786132812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TYSYGLGSCVK_	ENSG00000155087|ENST00000285402|ODF1	45.97224482568171	0.34424757290527136	3				NaN	NaN	0	NaN	7592	5417	13009
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13015	38.609	NaN	2058.1	30	0	140.66	0.214	+			6103	AVNMVPFPR	9	60	515.7794082004705	1029.5442634677408	2	515.7786865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVNMVPFPR_	CON__ENSEMBL:ENSBTAP00000025008;ENSG00000101162|ENST00000217133|TUBB1;ENSG00000104833|ENST00000264071|TUBB4A;ENSG00000137267|ENST00000333628|TUBB2A;ENSG00000137285|ENST00000259818|TUBB2B;ENSG00000173213|ENST00000308911|TUBB8B;ENSG00000176014|ENST00000317702|TUBB6;ENSG00000188229|ENST00000340384|TUBB4B;ENSG00000196230|ENST00000327892|TUBB;ENSG00000258947|ENST00000315491|TUBB3;ENSG00000261456|ENST00000568584|TUBB8;ENST00000290377.9_1_9:141071128-141071713:+|nuORF;ENST00000417736.2_1_18:12308439-12326126:+|nuORF;ENST00000518096.1_1_8:30210219-30210855:+|nuORF;ENST00000604929.1_1_9:140136931-140138005:+|nuORF;nc|ENSG00000258947|Q13509-2|TUBB3	44.116797842482775	0.37197099687881774	3				NaN	NaN	0	NaN	7593	5420	13014
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13016	38.613	NaN	1077.6	30	0	129.58	0.106	+			17273	IAALGGLCLI	10	51	472.2853800149113	NaN	0	472.2853088378906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IAALGGLCLI_	ENSG00000095539|ENST00000210633|SEMA4G;nc|ENSG00000095539|Q9NTN9|SEMA4G	65.89745868150666	0.18611864392217875	3				NaN	NaN	0	NaN	7594	5420	13014
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13017	38.615	NaN	1199.6	30	0	93.724	0.106	+			27418	MLACFKLR	8	47	491.27144630455643	NaN	0	491.2713317871094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MLACFKLR_	ENSG00000104613|ENST00000397977|INTS10	26.79610172149135	1.7418937515398478	3				NaN	NaN	0	NaN	7595	5420	13014
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13018	38.616	NaN	1179.7	30	0	130.97	0.106			+	9500	EKTQLNATP	9	58	501.26513671875	NaN	0	501.26513671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EKTQLNATP_	REV__ENSG00000102753|ENST00000261667|KPNA3	47.657333605630114	0.2228375344433429	3				NaN	NaN	0	NaN	7596	5420	13014
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13019	38.618	NaN	996.26	30	0	74.715	0.106	+			35697	SDKIGDKGL	9	53	466.75595641276584	NaN	0	466.7554931640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SDKIGDKGL_	ENSG00000118058|ENST00000534358|KMT2A;KMT2A|p.L3197Wfs*15|1|0.31|ENSG00000118058|chr11:118505488-118505488|T/-|frameshift_variant;nc|ENSG00000118058|Q03164-2|KMT2A;nc|ENSG00000118058|Q03164|KMT2A	44.116797842482775	0.2472372736944149	3				NaN	NaN	0	NaN	7597	5420	13014
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13020	38.62	NaN	1118.5	30	0	112.29	0.034			+	23734	LAWTILLM	8	53	480.7821297938479	959.5497066544958	2	480.78106689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LAWTILLM_	REV__ENST00000600053.5_1_19:58095114-58095255:+|nuORF	46.76643321282427	0.6143254112625767	3				NaN	NaN	0	NaN	7598	5420	13014
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13025	38.634	NaN	1419.4	30	0	341.94	0.144				-1	 	0	54	537.2697062979669	1072.5248596627337	2	537.2698364257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7600	5423	13024
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13030	38.65	NaN	1999.7	30	0	388.25	0.215			+	29451	PCLPFPNRR	9	63	550.293922752665	NaN	0	550.2947387695312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PCLPFPNRR_	REV__ENSG00000214050|ENST00000380254|FBXO16;REV__nc|ENSG00000214050|Q8IX29-2|FBXO16	31.954861631926434	0.3162336699109506	3				NaN	NaN	0	NaN	7602	5426	13029
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13031	38.654	NaN	1751.6	30	0	120.1	0.035	+			47176	VLTQLGAFY	9	57	506.2803988085256	1010.5462446838512	2	506.27947998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VLTQLGAFY_	ENSG00000143753|ENST00000323699|DEGS1	51.33545320467046	0.2872990594074956	3				NaN	NaN	0	NaN	7603	5426	13029
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13035	38.668	NaN	2781.4	30	0	254.41	0.144				-1	 	0	63	541.785962631128	1081.5573723290559	2	541.7866821289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7604	5429	13034
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13042	38.701	NaN	1922.7	30	0	315.7	0.143	+			47408	VPNKVIQCF	9	56	524.2868263155839	1046.5590996979677	2	524.2883911132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VPNKVIQCF_	CLTC|p.A1374*|1|0.05|ENSG00000141367|chr17:59683464-59683465|-/TA|frameshift_variant;CLTC|p.D632Yfs*7|1|0.15|ENSG00000141367|chr17:59666589-59666590|-/TTACA|frameshift_variant;ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000141367|Q00610-2|CLTC	60.11826168202944	0.21262886028301267	3				NaN	NaN	0	NaN	7605	5435	13041
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13048	38.719	NaN	3635.3	30	0	452.45	0.214			+	28920	NRAEKIRW	8	63	536.804765961431	1071.594978989662	2	536.8038940429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NRAEKIRW_	REV__ENSG00000114767|ENST00000232888|RRP9	82.30502934623384	0.30436709589983096	3				NaN	NaN	0	NaN	7608	5438	13047
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13049	38.723	NaN	1360.8	30	0	269.01	0.033	+			3094	ASGGIFVLK	9	46	446.26911042596873	890.5236679187375	2	446.26873779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASGGIFVLK_	ENSG00000030066|ENST00000378460|NUP160;ENST00000526870.1_3_11:47861380-47861614:-|nuORF;nc|ENSG00000030066|Q12769|NUP160	62.107414245175825	0.1960472003779324	3				NaN	NaN	0	NaN	7609	5438	13047
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13053	38.737	NaN	525.34	30	0	76.559	0.145			+	1659	AGPTALVL	8	32	371.22756751998946	NaN	0	371.22747802734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AGPTALVL_	REV__ENSG00000173269|ENST00000372027|MMRN2	21.70233525837049	1.7418937515398478	3				NaN	NaN	0	NaN	7610	5441	13052
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13057	38.754	NaN	1687.6	30	0	99.757	0.144	+			9721	EMSKTALQF	9	62	527.764460906912	1053.5143688806238	2	527.7655639648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EMSKTALQF_	ENSG00000173597|ENST00000310613|SULT1B1	40.77816245573522	0.41113185337114944	3				NaN	NaN	0	NaN	7611	5444	13056
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13062	38.771	NaN	3142	30	0	1520.5	0.142				-1	 	0	54	481.2721384854306	960.5297240376613	2	481.2711486816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7613	5447	13061
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13070	38.791	NaN	5628.3	30	0	926.52	0.214	+			38720	SSLFSLLSK	9	62	491.285185328784	980.555817724368	2	491.2844543457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSLFSLLSK_	ENSG00000141627|ENST00000675505|DYM	104.0567914643314	0.03506238181059741	3				NaN	NaN	0	NaN	7618	5450	13069
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13071	38.794	NaN	1210.7	30	0	153.9	0.106	+			9253	EGVNRILL	8	52	457.27721162622197	912.539870319244	2	457.2767028808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EGVNRILL_	ENST00000401813.7_1_1:2130482-2130731:-|nuORF	44.116797842482775	0.6307669463330267	3				NaN	NaN	0	NaN	7619	5450	13069
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13072	38.796	NaN	2051.6	30	0	273.07	0.106			+	46587	VFPLAYFPL	9	64	533.8012087555567	1065.5878645779133	2	533.8005981445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VFPLAYFPL_	REV__ENSG00000135931|ENST00000611582|ARMC9;REV__nc|ENSG00000135931|Q7Z3E5-2|ARMC9	39.021493756699265	0.43173687394350213	3				NaN	NaN	0	NaN	7620	5450	13069
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13073	38.798	NaN	2212.3	30	0	759.23	0.035	+			48404	VTIITSGAVVA	11	61	515.8118415839606	1029.609130234721	2	515.8118286132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTIITSGAVVA_	ENSG00000065029|ENST00000373953|ZNF76;ENST00000229405.8_1_6:35262154-35262442:+|nuORF;nc|ENSG00000065029|P36508-2|ZNF76	30.568863376406313	0.6691487505135859	3				NaN	NaN	0	NaN	7621	5450	13069
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13080	38.828	NaN	1367	30	0	67.643	0.214	+			45639	TYRNVMEQF	9	61	594.2804894171366	1186.546425901073	2	594.2800903320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TYRNVMEQF_	BAIAP2L1|p.A287Lfs*11|2|0.27|ENSG00000006453|chr7:98310542-98310542|G/-|frameshift_variant;BAIAP2L1|p.F462Lfs*34|1|0.21|ENSG00000006453|chr7:98304232-98304232|A/-|frameshift_variant;BAIAP2L1|p.N24D|1|0.22|ENSG00000006453|chr7:98362414-98362414|T/C|missense_variant;BAIAP2L1|p.N36Ifs*6|1|0.24|ENSG00000006453|chr7:98362382-98362382|C/-|frameshift_variant;BAIAP2L1|p.P436Hfs*60|4|0.39|ENSG00000006453|chr7:98304311-98304311|G/-|frameshift_variant;ENSG00000006453|ENST00000005260|BAIAP2L1;ENST00000462558.5_1_7:97937677-98030347:-|nuORF	76.16968421966216	0.11411088698345859	3				NaN	NaN	0	NaN	7622	5456	13079
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13081	38.832	NaN	1698	30	0	185.37	0.035			+	37306	SLDIGIAKGL	10	55	493.7986413470066	985.5827297608132	2	493.79827880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLDIGIAKGL_	REV__ENST00000371145.7_1_X:123095638-123155247:+|nuORF;REV__ENST00000371160.5_1_X:123095165-123156432:+|nuORF;REV__ENST00000458176.5_1_X:123095593-123156435:+|nuORF;REV__ENST00000466748.5_1_X:123095638-123189980:+|nuORF	42.86426827375447	0.522752283233888	3				NaN	NaN	0	NaN	7623	5456	13079
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13088	38.862	NaN	1763.1	30	0	83.545	0.145	+			7161	DAFKSGIVQY	10	59	564.291075684895	1126.5675984365898	2	564.29150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DAFKSGIVQY_	ENSG00000164307|ENST00000443439|ERAP1;ENST00000507859.1_1_5:96121490-96126328:-|nuORF;ERAP1|p.T584Qfs*21|1|0.21|ENSG00000164307|chr5:96786479-96786479|T/-|frameshift_variant;ERAP1|p.T768Nfs*53|1|0.2|ENSG00000164307|chr5:96781837-96781838|-/GAAAT|frameshift_variant;nc|ENSG00000164307|Q9NZ08-2|ERAP1	66.96192283764107	0.30252237217063654	3				NaN	NaN	0	NaN	7624	5462	13087
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13097	38.896	NaN	1660.5	30	0	151.08	0.214	+			42078	SYFALQVGK	9	60	506.7772352307114	NaN	0	506.777099609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SYFALQVGK_	ENSG00000085871|ENST00000265498|MGST2;ENST00000502587.1_1_4:140587164-140599797:+|nuORF;ENST00000515067.1_1_4:140587191-140608853:+|nuORF;MGST2|p.K103Nfs*8|2|0.22|ENSG00000085871|chr4:139703529-139703529|A/-|frameshift_variant;nc|ENSG00000085871|Q99735-2|MGST2	35.61828744233558	0.29773779453147337	3				NaN	NaN	0	NaN	7627	5468	13096
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13098	38.9	NaN	1566.3	30	0	96.935	0.106	+			20751	KGWWVSHHY	9	63	600.2907318934524	1198.5669108537047	2	600.2926635742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KGWWVSHHY_	ENSG00000188735|ENST00000449592|TMEM120B	31.954861631926434	0.5046124803899898	3				NaN	NaN	0	NaN	7628	5468	13096
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13099	38.902	NaN	907.03	30	0	50.959	0.034			+	-1	CLIAGTWL	8	48	467.2451325950848	NaN	0	466.763916015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_C(Carbamidomethyl (C))LIAGTWL_	REV__ATP1A4|p.E557Nfs*4|1|0.1|ENSG00000132681|chr1:160171424-160171424|G/-|frameshift_variant;REV__ATP1A4|p.P701Lfs*20|1|0.3|ENSG00000132681|chr1:160174218-160174218|C/-|frameshift_variant;REV__ENSG00000132681|ENST00000368081|ATP1A4	39.021493756699265	1.7418937515398478	3				NaN	NaN	0	NaN	7629	5468	13096
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13103	38.916	NaN	3064.8	30	0	334.9	0.143				-1	 	0	63	511.7676452493959	1021.5207375655918	2	511.76800537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7630	5471	13102
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13107	38.933	NaN	1288.7	30	0	461.64	0.142			+	-1	IGGNCVPSL	9	47	458.7318379611043	915.4491229890086	2	458.7318420410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_IGGNC(Carbamidomethyl (C))VPSL_	REV__ENSG00000175305|ENST00000308108|CCNE2;REV__nc|ENSG00000175305|O96020-2|CCNE2	37.15910966729921	0.4535818937225704	3				NaN	NaN	0	NaN	7631	5474	13106
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13111	38.949	NaN	4254.4	30	0	669.26	0.142	+			10864	FAVAPNQNL	9	57	487.25926016598305	972.5039673987661	2	487.76055908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FAVAPNQNL_	COL6A2|p.P584Lfs*12|1|0.46|ENSG00000142173|chr21:46124896-46124896|C/-|frameshift_variant;ENSG00000142173|ENST00000300527|COL6A2;nc|ENSG00000142173|P12110-2|COL6A2;nc|ENSG00000142173|P12110-3|COL6A2	115.45897859103373	0.02394878348088707	3				NaN	NaN	0	NaN	7632	5477	13110
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13116	38.966	NaN	2667.9	30	0	381.37	0.214			+	9386	EKEDTYKL	8	55	513.2616585491485	1024.5087641650969	2	513.261474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EKEDTYKL_	REV__ENSG00000129810|ENST00000412997|SGO1;REV__nc|ENSG00000129810|Q5FBB7|SGO1	76.7741389293348	0.3504530765139327	3				NaN	NaN	0	NaN	7634	5480	13115
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13117	38.969	NaN	1458.3	30	0	112.05	0.035	+			44949	TVATFILQK	9	56	510.808902217942	1019.603251502684	2	510.80780029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVATFILQK_	ENSG00000144580|ENST00000273064|CNOT9;nc|ENSG00000144580|Q92600-2|CNOT9;nc|ENSG00000144580|Q92600-3|CNOT9	40.77816245573522	0.41113185337114944	3				NaN	NaN	0	NaN	7635	5480	13115
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13121	38.983	NaN	2181.2	30	0	512.99	0.215				-1	 	0	47	537.2697062979669	1072.5248596627337	2	537.2694091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7636	5483	13120
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13122	38.987	NaN	3492.1	30	0	418.33	0.106			+	-1	CSMRKATM	8	60	500.7227360119203	999.4309190906406	2	500.7223205566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_C(Carbamidomethyl (C))SMRKATM(Oxidation (M))_	REV__ENSG00000183655|ENST00000337975|KLHL25	44.116797842482775	0.6307669463330267	3				NaN	NaN	0	NaN	7637	5483	13120
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13123	38.989	NaN	1416.9	30	0	121.23	0.034	+			11229	FIGAYSWI	8	50	478.7462554739886	955.4779580147772	2	478.7445983886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FIGAYSWI_	tr|U7SQS0|U7SQS0_FUSNUIron(III)transportsystempermeaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01769PE=3SV=1	37.028477286268924	0.6747514403204248	3				NaN	NaN	0	NaN	7638	5483	13120
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13127	39.003	NaN	1828.2	30	0	286.84	0.144	+			17863	IFTNTVARF	9	60	534.7968758770695	1067.579198820939	2	534.7982788085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IFTNTVARF_	AKAP11|p.C1327Lfs*13|1|0.05|ENSG00000023516|chr13:42302724-42302725|-/CTTCTACTTTATAATC|frameshift_variant;AKAP11|p.F1607Sfs*48|1|0.11|ENSG00000023516|chr13:42303562-42303562|T/-|frameshift_variant;AKAP11|p.H1753Ifs*3|1|0.11|ENSG00000023516|chr13:42308589-42308589|T/-|frameshift_variant;AKAP11|p.H747Tfs*7|1|0.07|ENSG00000023516|chr13:42300981-42300981|T/-|frameshift_variant;AKAP11|p.N964Mfs*17|1|0.38|ENSG00000023516|chr13:42301633-42301633|A/-|frameshift_variant;AKAP11|p.S919Pfs*33|1|0.11|ENSG00000023516|chr13:42301498-42301498|T/-|frameshift_variant;ENSG00000023516|ENST00000025301|AKAP11	39.252832667884924	0.4290233611298554	3				NaN	NaN	0	NaN	7639	5486	13126
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13135	39.037	NaN	1454	30	0	129.31	0.214	+			3968	ATATLQVL	8	40	408.7453929385508	815.4762329439017	2	408.7452392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATATLQVL_	ENSG00000113248|ENST00000231173|PCDHB15;ENSG00000197479|ENST00000354757|PCDHB11;nc|ENSG00000197479|Q9Y5F2-2|PCDHB11	90.77665401227738	0.27511901818546464	3				NaN	NaN	0	NaN	7641	5492	13134
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13136	39.04	NaN	1720	30	0	138.75	0.106			+	-1	WRLFCMKL	8	62	585.3011994495056	1168.587845965811	2	585.2992553710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_WRLFC(Carbamidomethyl (C))M(Oxidation (M))KL_	REV__ENST00000407029.5_1_22:40859281-40859368:-|nuORF	35.200714571348534	0.6875396545722289	3				NaN	NaN	0	NaN	7642	5492	13134
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13137	39.042	NaN	1308.6	30	0	105.76	0.035				-1	SIVPKMLDI	9	52	516.2920532226562	NaN	0	516.2920532226562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_SIVPKM(Oxidation (M))LDI_	nc|ENSG00000205494|A6NMU1|OR52A4P	34.172542307311794	0.30503706118289736	3				NaN	NaN	0	NaN	7643	5492	13134
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13142	39.056	NaN	3944.5	30	0	623.78	0.214	+			18685	ITAVTVNQSL	10	65	523.2985668580137	1044.5825807828273	2	523.2986450195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ITAVTVNQSL_	CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000425226.1_1_2:203706028-203706388:-|nuORF;ENST00000550170.5_1_12:53294858-53298765:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	82.83050618871818	0.17249597090446123	3				NaN	NaN	0	NaN	7645	5495	13141
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13143	39.06	NaN	734.66	30	0	111.33	0.035				-1	ASMKKVKSL	9	31	336.5340881347656	NaN	0	336.5340881347656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_ASM(Oxidation (M))KKVKSL_	ENST00000369426.9_1_1:119575536-119588262:-|nuORF	19.996771675451527	0.3693019437812985	3				NaN	NaN	0	NaN	7646	5495	13141
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13148	39.074	NaN	6616.6	30	0	1198	0.214	+			39510	STFNVFVGK	9	67	499.7695975336316	997.5246421340632	2	499.7689208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STFNVFVGK_	ENSG00000122642|ENST00000242209|FKBP9;ENST00000494374.5_1_7:32997059-33028356:+|nuORF;FKBP9|p.N129Ifs*10|7|0.31|ENSG00000122642|chr7:32975192-32975192|C/-|frameshift_variant;FKBP9|p.P380Lfs*6|1|0.38|ENSG00000122642|chr7:32996258-32996258|C/-|frameshift_variant;nc|ENSG00000122642|O95302-3|FKBP9	104.0567914643314	0.03506238181059741	3				NaN	NaN	0	NaN	7648	5498	13147
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13149	39.077	NaN	1807.2	30	0	196.35	0.106			+	-1	EGGFSHCF	8	57	470.6849140162145	939.3552750992291	2	470.6842346191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_EGGFSHC(Carbamidomethyl (C))F_	REV__ENST00000377102.5_1_13:80912887-80913016:-|nuORF	28.2542754592877	0.7411748056684583	3				NaN	NaN	0	NaN	7649	5498	13147
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13150	39.079	NaN	1000.1	30	0	75.143	0.106				-1	VMSIPNVIRLK	11	48	429.2616882324219	NaN	0	429.2616882324219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_VM(Oxidation (M))SIPNVIRLK_	PRKX|p.D84N|1|0.06|ENSG00000183943|chrX:3674683-3674683|C/T|missense_variant	33.03940026070387	0.41817340257782254	3				NaN	NaN	0	NaN	7650	5498	13147
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13151	39.081	NaN	1066.8	30	0	66.213	0.039			+	11391	FLNDGEKSLYN	11	57	650.3156127929688	NaN	0	650.3156127929688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FLNDGEKSLYN_	REV__ENST00000380121.7_1_13:33010521-33020605:-|nuORF;REV__nc|ENSG00000244754|Q92802-3|N4BP2L2	29.170058357718403	0.43541742044178583	3				NaN	NaN	0	NaN	7651	5498	13147
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13155	39.096	NaN	2058.1	30	0	285.5	0.143	+			45307	TVSDAILRY	9	59	519.285514334437	1036.556475735674	2	519.2855224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVSDAILRY_	ENSG00000002919|ENST00000359238|SNX11;nc|ENSG00000002919|Q9Y5W9-2|SNX11	63.53385203322761	0.18415635464017938	3				NaN	NaN	0	NaN	7652	5501	13154
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13161	39.112	NaN	2740.7	30	0	269.27	0.144	+			49943	VYVQNVVKL	9	70	531.3220776201954	1060.6296023071907	2	531.3228759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYVQNVVKL_	AP3D1|p.A531T|1|0.3|ENSG00000065000|chr19:2118723-2118723|C/T|missense_variant;ENSG00000065000|ENST00000643116|AP3D1;nc|ENSG00000065000|O14617-2|AP3D1;nc|ENSG00000065000|O14617-3|AP3D1;nc|ENSG00000065000|O14617-4|AP3D1;nc|ENSG00000065000|O14617|AP3D1	68.78682469695295	0.14603441672067394	3				NaN	NaN	0	NaN	7655	5504	13160
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13169	39.145	NaN	4749.7	30	0	1034.8	0.143	+			37137	SITSVFITK	9	56	498.29289743058587	994.5712419279718	2	498.2922668457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SITSVFITK_	ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;TRRAP-ASNS|1|fusion;TRRAP-ASNS|2|fusion;TRRAP|p.K3443Sfs*19|1|0.28|ENSG00000196367|chr7:99004246-99004246|A/-|frameshift_variant	70.8162118820467	0.13725933411854815	3				NaN	NaN	0	NaN	7657	5510	13168
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13175	39.164	NaN	1709	30	0	120.18	0.214	+			28255	NDIVVKVL	8	52	450.2822624306926	898.5499719281852	2	450.2816162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NDIVVKVL_	ENSG00000166333|ENST00000299421|ILK;nc|ENSG00000166333|Q13418-2|ILK;nc|ENSG00000166333|Q13418-3|ILK	93.1432384553994	0.2679547234115296	3				NaN	NaN	0	NaN	7660	5513	13174
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13176	39.167	NaN	1515.1	30	0	122.13	0.106			+	26408	LTELKSVAL	9	55	487.300546214185	972.58653949517	2	487.2998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LTELKSVAL_	REV__ENSG00000103489|ENST00000261381|XYLT1;REV__XYLT1|p.V724Sfs*55|1|0.34|ENSG00000103489|chr16:17127720-17127720|T/-|frameshift_variant	36.446750945000026	0.4619375763483977	3				NaN	NaN	0	NaN	7661	5513	13174
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13177	39.169	NaN	1392.3	30	0	261.15	0.106	+			13220	GIGSVLPLK	9	40	442.2846969916232	882.5548410500464	2	442.2840881347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GIGSVLPLK_	ENSG00000162437|ENST00000294428|RAVER2;nc|ENSG00000162437|Q9HCJ3-2|RAVER2	47.657333605630114	0.33044192980041115	3				NaN	NaN	0	NaN	7662	5513	13174
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13178	39.171	NaN	1241	30	0	85.165	0.039			+	-1	LARFMQDLSSN	11	58	649.3137817382812	NaN	0	649.3137817382812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_LARFM(Oxidation (M))QDLSSN_	REV__ENSG00000108551|ENST00000225688|RASD1	27.047317107675042	0.44487757903053116	3				NaN	NaN	0	NaN	7663	5513	13174
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13182	39.185	NaN	1720.5	30	0	316.66	0.143			+	32970	REDRLNVAA	9	55	522.2840576171875	NaN	0	522.2840576171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_REDRLNVAA_	REV__ENSG00000230778|ENST00000434396|ANKRD63	34.172542307311794	0.30503706118289736	3				NaN	NaN	0	NaN	7664	5516	13181
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13188	39.201	NaN	2090.8	30	0	315	0.214	+			45615	TYQDIQNTI	9	48	548.2697645760911	1094.5249762189821	2	548.2704467773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TYQDIQNTI_	ENSG00000181222|ENST00000674977|POLR2A;nc|ENSG00000181222|P24928|POLR2A	46.45678178249821	0.34452392205506005	3				NaN	NaN	0	NaN	7667	5519	13187
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13189	39.205	NaN	1732.1	30	0	238.75	0.035	+			40870	SVFGTMPLK	9	50	490.268149796061	978.521746658922	2	490.7689208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVFGTMPLK_	ENSG00000151348|ENST00000533608|EXT2;nc|ENSG00000151348|Q93063-2|EXT2;nc|ENSG00000151348|Q93063-3|EXT2	39.252832667884924	0.4290233611298554	3				NaN	NaN	0	NaN	7668	5519	13187
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13194	39.219	NaN	1482	30	0	186.93	0.144				-1	FVLGHPMCV	9	59	530.2614436158614	NaN	0	530.2631225585938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_FVLGHPMC(Carbamidomethyl (C))V_	ENSG00000102076|ENST00000369951|OPN1LW;ENSG00000166160|ENST00000369929|OPN1MW2;ENSG00000268221|ENST00000595290|OPN1MW;ENSG00000269433|ENST00000599405|OPN1MW3;OPN1MW|p.S313Vfs*13|1|0.04|ENSG00000268221|chrX:154193597-154193597|A/-|frameshift_variant	39.021493756699265	0.2805557132942146	3				NaN	NaN	0	NaN	7670	5522	13193
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13198	39.236	NaN	965.3	30	0	60.605	0.142	+			12796	GELVKAIVV	9	44	464.2971908110961	NaN	0	464.29681396484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GELVKAIVV_	ATP13A3|p.F1107Lfs*5|1|0.42|ENSG00000133657|chr3:194419960-194419960|A/-|frameshift_variant;ATP13A3|p.I476Sfs*11|1|0.19|ENSG00000133657|chr3:194446998-194446998|T/-|frameshift_variant;ATP13A3|p.L1114Ffs*17|1|0.25|ENSG00000133657|chr3:194419939-194419940|-/A|frameshift_variant;ATP13A3|p.L1114Yfs*22|1|0.23|ENSG00000133657|chr3:194419940-194419940|A/-|frameshift_variant;ATP13A3|p.P1198Lfs*19|1|0.04|ENSG00000133657|chr3:194406007-194406008|-/ATATAGTA|frameshift_variant;ATP13A3|p.S1110Ffs*21|2|0.22|ENSG00000133657|chr3:194419952-194419953|-/A|frameshift_variant;ATP13A3|p.V1108Cfs*23|1|0.26|ENSG00000133657|chr3:194419959-194419960|-/A|frameshift_variant;ENSG00000133657|ENST00000645319|ATP13A3;nc|ENSG00000133657|Q9H7F0-2|ATP13A3;nc|ENSG00000133657|Q9H7F0|ATP13A3	26.69291269510374	0.34280015626154364	3				NaN	NaN	0	NaN	7671	5525	13197
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13204	39.254	NaN	2413	30	0	265.66	0.144			+	32111	QSIKLDQDM	9	63	539.2638272528055	1076.513101572411	2	539.2659301757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QSIKLDQDM_	REV__ENSG00000099940|ENST00000215730|SNAP29;REV__ENST00000490458.1_1_22:21213398-21224822:+|nuORF	70.8162118820467	0.13725933411854815	3				NaN	NaN	0	NaN	7674	5528	13203
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13208	39.27	NaN	4397.3	30	0	1111.9	0.214			+	30071	PQLISPVGQS	10	54	513.2854035086018	1024.5562540840035	2	513.2852172851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PQLISPVGQS_	REV__ENSG00000168411|ENST00000361070|RFWD3;REV__ENST00000571776.1_1_16:74694828-74700696:-|nuORF;REV__RFWD3|p.F691Lfs*9|1|0.45|ENSG00000168411|chr16:74626451-74626451|A/-|frameshift_variant;REV__RFWD3|p.Q268Rfs*80|1|0.08|ENSG00000168411|chr16:74644726-74644726|G/-|frameshift_variant	49.536043120802724	0.461275219792494	3				NaN	NaN	0	NaN	7675	5531	13207
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13209	39.273	NaN	1954.2	30	0	371.88	0.035	+			28994	NSMGLFLQK	9	53	519.2765183060337	1036.5384836788674	2	519.2764892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NSMGLFLQK_	ENSG00000079459|ENST00000220584|FDFT1;ENST00000446331.6_1_8:11660331-11696115:+|nuORF;FDFT1|p.N215S|1|0.21|ENSG00000079459|chr8:11826157-11826157|A/G|missense_variant;nc|ENSG00000079459|P37268-2|FDFT1;nc|ENSG00000079459|P37268-3|FDFT1;nc|ENSG00000079459|P37268-4|FDFT1;nc|ENSG00000079459|P37268-5|FDFT1	39.252832667884924	0.4290233611298554	3				NaN	NaN	0	NaN	7676	5531	13207
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13213	39.287	NaN	3993.3	30	0	877.44	0.142	+			12075	GAAGVHFIY	9	57	467.74306294482307	933.4715729564462	2	467.74273681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GAAGVHFIY_	ENSG00000169813|ENST00000682386|HNRNPF	60.403631409065575	0.21025000616765316	3				NaN	NaN	0	NaN	7677	5534	13212
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13221	39.319	NaN	2327.7	30	0	458.68	0.214				-1	 	0	60	537.2697062979669	1072.5248596627337	2	537.2694702148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7679	5540	13220
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13222	39.323	NaN	1437.4	30	0	184.44	0.106	+			5835	AVIGPDVFAK	10	51	508.7929435250511	1015.5713341169022	2	509.29412841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVIGPDVFAK_	ENSG00000261150|ENST00000615648|EPPK1;EPPK1|p.G2015Vfs*36|2|0.33|ENSG00000261150|chr8:143867210-143867210|C/-|frameshift_variant;EPPK1|p.Q829Rfs*8|1|0.05|ENSG00000261150|chr8:143870770-143870770|C/-|frameshift_variant;EPPK1|p.Y695Ifs*68|1|0.36|ENSG00000261150|chr8:143871171-143871172|-/T|frameshift_variant	37.81151784470057	0.569310847604193	3				NaN	NaN	0	NaN	7680	5540	13220
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13223	39.325	NaN	1096.2	30	0	192.25	0.035	+			25754	LSADVPPALL	10	47	498.29289743058587	994.5712419279718	2	498.2922668457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSADVPPALL_	ENSG00000167207|ENST00000647318|NOD2;nc|ENSG00000167207|Q9HC29|NOD2	26.69291269510374	0.6618461711292317	3				NaN	NaN	0	NaN	7681	5540	13220
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13227	39.339	NaN	1596.8	30	0	172.13	0.144	+			20285	KENSLITQF	9	54	540.290022044518	1078.5654911558358	2	540.290771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KENSLITQF_	ENSG00000102699|ENST00000381989|PARP4	58.2462437865262	0.22823408064396822	3				NaN	NaN	0	NaN	7682	5543	13226
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13232	39.356	NaN	1953.6	30	0	136.79	0.145			+	-1	QHSAQTCLCC	10	61	604.2366604595402	1206.4587679858803	2	604.2350463867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_QHSAQTCLC(Carbamidomethyl (C))C(Carbamidomethyl (C))_	REV__nc|ENSG00000011021|P51797-5|CLCN6	18.262085536374414	0.7236521404371882	3				NaN	NaN	0	NaN	7684	5546	13231
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13236	39.371	NaN	1359.1	30	0	136.46	0.214			+	33620	RLSLRWGA	8	44	479.78262285361194	957.5506927740239	2	479.78192138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RLSLRWGA_	REV__ENST00000315150.9_1_3:128809685-128809853:-|nuORF	20.94693142431847	0.7975965917238792	3				NaN	NaN	0	NaN	7685	5549	13235
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13237	39.375	NaN	1348.4	30	0	282.78	0.106			+	2359	ANAALRRR	8	45	464.2845103146896	926.5544676961792	2	464.2845153808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ANAALRRR_	REV__ENSG00000179774|ENST00000373673|ATOH7	31.954861631926434	0.7126016770032289	3				NaN	NaN	0	NaN	7686	5549	13235
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13238	39.377	NaN	870.53	30	0	174.54	0.033	+			12582	GEHGIVVF	8	38	429.22973722935524	856.4449215255105	2	429.2292175292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEHGIVVF_	ENSG00000167165|ENST00000305139|UGT1A6;ENSG00000241119|ENST00000354728|UGT1A9;ENSG00000241635|ENST00000305208|UGT1A1;ENSG00000242366|ENST00000373450|UGT1A8;ENSG00000242515|ENST00000344644|UGT1A10;ENSG00000244122|ENST00000373426|UGT1A7;ENSG00000244474|ENST00000373409|UGT1A4;nc|ENSG00000167165|P19224-2|UGT1A6;nc|ENSG00000167165|P19224-3|UGT1A6;nc|ENSG00000241119|O60656-2|UGT1A9;nc|ENSG00000241635|P22309-2|UGT1A1;nc|ENSG00000242366|Q9HAW9-2|UGT1A8;nc|ENSG00000242515|Q9HAW8-2|UGT1A10;nc|ENSG00000244122|Q9HAW7-2|UGT1A7;nc|ENSG00000244474|P22310-2|UGT1A4;nc|ENSG00000288702|P35503-3|UGT1A3;nc|ENSG00000288702|P35503|UGT1A3;nc|ENSG00000288705|P35504-2|UGT1A5;nc|ENSG00000288705|P35504|UGT1A5	44.53106598305862	0.628196326904373	3				NaN	NaN	0	NaN	7687	5549	13235
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13242	39.391	NaN	3082.3	30	0	201.21	0.214				-1	 	0	73	528.7726467814624	1055.5307406297247	2	528.7718505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7688	5552	13241
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13243	39.394	NaN	1679.3	30	0	280.86	0.106	+			19863	KEEKVLHE	8	51	506.27809121173385	1010.5416294902677	2	506.2771301269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEEKVLHE_	ENSG00000122025|ENST00000241453|FLT3;nc|ENSG00000122025|P36888-2|FLT3	40.77816245573522	0.6514838689002179	3				NaN	NaN	0	NaN	7689	5552	13241
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13244	39.396	NaN	1308.6	30	0	70.896	0.106			+	9839	EPPQHLLIV	9	64	523.3060663342211	NaN	0	523.3065795898438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EPPQHLLIV_	REV__ENST00000550103.2_1_14:90315160-90397958:-|nuORF	30.503639358989545	0.3235605894931338	3				NaN	NaN	0	NaN	7690	5552	13241
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13245	39.398	NaN	2068.4	30	0	291.75	0.106	+			6990	CQRQQRQL	8	61	558.7886250561679	NaN	0	558.788818359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_C(Carbamidomethyl (C))QRQQRQL_	DMXL1|p.N3021Mfs*3|1|0.28|ENSG00000172869|chr5:119247193-119247193|A/-|frameshift_variant;ENSG00000172869|ENST00000539542|DMXL1;nc|ENSG00000172869|Q9Y485|DMXL1	40.5726180659479	1.7418937515398478	3				NaN	NaN	0	NaN	7691	5552	13241
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13246	39.4	NaN	1445.3	30	0	72.954	0.106				-1	KTFQLTCGGST	11	58	600.2902221679688	NaN	0	600.2902221679688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_KTFQLTC(Carbamidomethyl (C))GGST_	ENST00000237281.4_1_6:146126528-146126594:-|nuORF	28.081489160057373	0.4402687122534875	3				NaN	NaN	0	NaN	7692	5552	13241
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13247	39.401	NaN	1037.7	30	0	98.019	0.037	+			30413	PWLCLGLGLAS	11	55	565.3077392578125	NaN	0	565.3077392578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PWLCLGLGLAS_	ENSG00000010282|ENST00000441594|HHATL	27.882242232435846	0.44115667141176046	3				NaN	NaN	0	NaN	7693	5552	13241
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13251	39.415	NaN	781.31	30	0	69.699	0.142	+			47309	VNSSILQY	8	35	462.24533524086166	NaN	0	462.2456970214844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VNSSILQY_	ENSG00000164509|ENST00000652347|IL31RA;nc|ENSG00000164509|Q8NI17-10|IL31RA;nc|ENSG00000164509|Q8NI17-11|IL31RA;nc|ENSG00000164509|Q8NI17-12|IL31RA;nc|ENSG00000164509|Q8NI17-3|IL31RA;nc|ENSG00000164509|Q8NI17-5|IL31RA;nc|ENSG00000164509|Q8NI17-6|IL31RA;nc|ENSG00000164509|Q8NI17-7|IL31RA;nc|ENSG00000164509|Q8NI17-9|IL31RA;nc|ENSG00000164509|Q8NI17|IL31RA	35.61828744233558	1.7418937515398478	3				NaN	NaN	0	NaN	7694	5555	13250
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13255	39.432	NaN	1043.7	30	0	151.41	0.141			+	29637	PGGFSGPGGF	10	43	440.2038304257063	878.3931079182126	2	440.2038879394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PGGFSGPGGF_	REV__CON__Q01546;REV__ENSG00000185069|ENST00000332411|KRT76;REV__KRT76|p.G150Afs*9|1|0.43|ENSG00000185069|chr12:52776843-52776843|C/-|frameshift_variant	47.91560031466742	0.4762067885998563	3				NaN	NaN	0	NaN	7695	5558	13254
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13262	39.463	NaN	950.89	30	0	192.76	0.214				-1	 	0	30	349.26516428957893	696.5157756459579	2	349.2646789550781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7696	5564	13261
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13263	39.467	NaN	1557.3	30	0	118.87	0.035	+			45663	TYVSGTLRF	9	61	522.2803101614319	1042.5460673896637	2	522.2818603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TYVSGTLRF_	ENSG00000134255|ENST00000357172|CEPT1	52.936696900407355	0.27249468807391813	3				NaN	NaN	0	NaN	7697	5564	13261
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13268	39.481	NaN	2146.6	30	0	313.32	0.214	+			50739	YEKGCEFVL	9	67	572.7712813365466	1143.5280097398932	2	572.7717895507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_YEKGC(Carbamidomethyl (C))EFVL_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	47.95952297671804	0.32689736945648856	3				NaN	NaN	0	NaN	7699	5567	13267
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13269	39.485	NaN	1719.3	30	0	141.02	0.106			+	50083	WGGMLRALF	9	62	525.7816617921562	NaN	0	525.7824096679688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WGGMLRALF_	REV__OSCP1|p.M306Wfs*15|1|0.33|ENSG00000116885|chr1:36420550-36420550|C/-|frameshift_variant	40.5726180659479	0.27166212580479165	3				NaN	NaN	0	NaN	7700	5567	13267
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13270	39.487	NaN	2270.2	30	0	1077.9	0.046				-1	 	0	43	577.2972267817187	1728.869850945356	3	577.2968139648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7701	5567	13267
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13282	39.533	NaN	2949.6	30	0	329.28	0.214	+			36336	SESSLALRL	9	51	488.27754560030644	974.5405382674129	2	488.2772216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SESSLALRL_	DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;nc|ENSG00000187908|Q9UGM3-2|DMBT1;nc|ENSG00000187908|Q9UGM3-2|DMBT1;nc|ENSG00000187908|Q9UGM3-2|DMBT1;nc|ENSG00000187908|Q9UGM3-2|DMBT1;nc|ENSG00000187908|Q9UGM3-2|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-4|DMBT1;nc|ENSG00000187908|Q9UGM3-4|DMBT1;nc|ENSG00000187908|Q9UGM3-4|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-8|DMBT1;nc|ENSG00000187908|Q9UGM3-8|DMBT1;nc|ENSG00000187908|Q9UGM3-8|DMBT1;nc|ENSG00000187908|Q9UGM3-8|DMBT1;nc|ENSG00000187908|Q9UGM3-9|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1	85.16082228582465	0.07850854922700509	3				NaN	NaN	0	NaN	7704	5576	13281
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13283	39.537	NaN	4804.4	30	0	503.98	0.106	+			39661	STIFYYVQK	9	68	574.8035189572167	1147.5924849812334	2	574.8038940429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STIFYYVQK_	ENSG00000092148|ENST00000399332|HECTD1;HECTD1|p.F2271Lfs*13|1|0.16|ENSG00000092148|chr14:31107059-31107059|A/-|frameshift_variant;HECTD1|p.I2041Lfs*27|1|0.36|ENSG00000092148|chr14:31113133-31113133|T/-|frameshift_variant	98.62937762414208	0.04060045538121712	3				NaN	NaN	0	NaN	7705	5576	13281
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13284	39.539	NaN	1128.7	30	0	90.728	0.033			+	27294	MGPRAGEQ	8	47	431.1980228192907	NaN	0	431.1982421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))GPRAGEQ_	REV__ENSG00000138658|ENST00000505019|ZGRF1;REV__ENST00000473015.5_1_4:113483525-113509083:-|nuORF;REV__ZGRF1|p.E2096Rfs*4|1|0.33|ENSG00000138658|chr4:112539576-112539577|-/T|frameshift_variant;REV__ZGRF1|p.R2022Kfs*8|1|0.29|ENSG00000138658|chr4:112539970-112539971|-/T|frameshift_variant	44.116797842482775	1.7418937515398478	3				NaN	NaN	0	NaN	7706	5576	13281
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13288	39.554	NaN	2011.1	30	0	556.04	0.141			+	29846	PLATSPAPL	9	46	433.7530047667988	865.4914566003977	2	433.75286865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PLATSPAPL_	REV__ENST00000454665.6_1_6:27222493-27222541:+|nuORF	35.200714571348534	0.47427825964483533	3				NaN	NaN	0	NaN	7707	5579	13287
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13293	39.57	NaN	1860.8	30	0	294.13	0.214				-1	VMHHPAHKS	9	54	530.2618194629794	1058.5090859927586	2	530.2613525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_VM(Oxidation (M))HHPAHKS_	ENSG00000152465|ENST00000378165|NMT2	31.954861631926434	0.5046124803899898	3				NaN	NaN	0	NaN	7709	5582	13292
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13294	39.573	NaN	1575.7	30	0	91.023	0.037			+	17485	ICVEGKVPIY	10	58	560.8080444335938	NaN	0	560.8080444335938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ICVEGKVPIY_	REV__ENSG00000095627|ENST00000695399|TDRD1;REV__nc|ENSG00000095627|Q9BXT4-2|TDRD1;REV__nc|ENSG00000095627|Q9BXT4-3|TDRD1;REV__nc|ENSG00000095627|Q9BXT4-4|TDRD1	38.753607047826485	0.3729281687199363	3				NaN	NaN	0	NaN	7710	5582	13292
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13299	39.589	NaN	1846.2	30	0	257.91	0.144			+	9022	EGDCNWSSNS	10	57	549.6921399262466	1097.369726919293	2	549.6937255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EGDCNWSSNS_	REV__ENSG00000100422|ENST00000216264|CERK;REV__nc|ENSG00000100422|Q8TCT0-2|CERK	19.996771675451527	0.7148376616046445	3				NaN	NaN	0	NaN	7712	5585	13298
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13304	39.605	NaN	6886.8	30	0	1038	0.214	+			39801	STLDIVLANK	10	73	537.3141016450566	NaN	0	537.3143920898438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STLDIVLANK_	ENSG00000167325|ENST00000300738|RRM1	147.73206827945663	0.0012995965749093006	3				NaN	NaN	0	NaN	7714	5588	13303
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13305	39.609	NaN	2154.5	30	0	213.55	0.106	+			46514	VEVSIPAKL	9	59	478.2954047217439	954.5762565102879	2	478.29473876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VEVSIPAKL_	ENSG00000115677|ENST00000310931|HDLBP;ENST00000487169.5_1_2:242174673-242189369:-|nuORF;nc|ENSG00000115677|Q00341-2|HDLBP	54.776311868738084	0.25715957988447635	3				NaN	NaN	0	NaN	7715	5588	13303
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13306	39.61	NaN	2224	30	0	318.21	0.106	+			42724	TDGKVFQF	8	56	471.24048002182093	940.4664071104419	2	471.2394714355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TDGKVFQF_	ENSG00000114391|ENST00000394077|RPL24	68.78682469695295	0.41700713582915416	3				NaN	NaN	0	NaN	7716	5588	13303
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13307	39.612	NaN	1731.7	30	0	118.13	0.106	+			17670	IEKLAVEAL	9	59	493.3002704574567	984.5859879817134	2	493.3006286621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IEKLAVEAL_	ENSG00000166165|ENST00000348956|CKB	70.39856735676683	0.13906523160059378	3				NaN	NaN	0	NaN	7717	5588	13303
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13308	39.614	NaN	1793.7	30	0	147.55	0.106	+			27215	MEIPPRRR	8	54	527.8008387525331	1053.587124571866	2	527.801025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MEIPPRRR_	ENSG00000049618|ENST00000636930|ARID1B;nc|ENSG00000049618|Q8NFD5-1|ARID1B;nc|ENSG00000049618|Q8NFD5-2|ARID1B;nc|ENSG00000049618|Q8NFD5|ARID1B	40.5726180659479	0.6527593143185008	3				NaN	NaN	0	NaN	7718	5588	13303
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13309	39.616	NaN	1417.3	30	0	126.05	0.106			+	9853	EPVGGGAPPSF	11	52	507.7488628554781	1013.4831727777562	2	507.7496643066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EPVGGGAPPSF_	REV__ENSG00000166886|ENST00000300131|NAB2;REV__nc|ENSG00000166886|Q15742-2|NAB2;REV__nc|ENSG00000166886|Q15742-3|NAB2	28.5767321226876	0.690044582712672	3				NaN	NaN	0	NaN	7719	5588	13303
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13310	39.618	NaN	1927.6	30	0	246.71	0.034	+			41918	SVVIANIVVG	10	56	485.8007039668998	969.5868550005996	2	485.79949951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVVIANIVVG_	ENST00000370689.6_1_1:84701367-84701451:+|nuORF	37.81151784470057	0.569310847604193	3				NaN	NaN	0	NaN	7720	5588	13303
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13315	39.632	NaN	3046.5	30	0	298.31	0.214	+			36616	SGFEGMFTK	9	60	502.23174378041637	1002.4489346276328	2	502.2309265136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SGFEGMFTK_	ENSG00000153201|ENST00000283195|RANBP2;ENSG00000153201|ENST00000283195|RANBP2;ENSG00000153201|ENST00000283195|RANBP2;RANBP2|p.C2737Vfs*35|1|0.18|ENSG00000153201|chr2:108772957-108772957|T/-|frameshift_variant;RANBP2|p.C2737Vfs*35|1|0.18|ENSG00000153201|chr2:108772957-108772957|T/-|frameshift_variant;RANBP2|p.C2737Vfs*35|1|0.18|ENSG00000153201|chr2:108772957-108772957|T/-|frameshift_variant;RANBP2|p.F3068Lfs*10|1|0.06|ENSG00000153201|chr2:108782692-108782692|T/-|frameshift_variant;RANBP2|p.F3068Lfs*10|1|0.06|ENSG00000153201|chr2:108782692-108782692|T/-|frameshift_variant;RANBP2|p.F3068Lfs*10|1|0.06|ENSG00000153201|chr2:108782692-108782692|T/-|frameshift_variant;RANBP2|p.H3114Sfs*18|1|0.33|ENSG00000153201|chr2:108782827-108782828|-/T|frameshift_variant;RANBP2|p.H3114Sfs*18|1|0.33|ENSG00000153201|chr2:108782827-108782828|-/T|frameshift_variant;RANBP2|p.H3114Sfs*18|1|0.33|ENSG00000153201|chr2:108782827-108782828|-/T|frameshift_variant;RANBP2|p.K1989Nfs*9|1|0.05|ENSG00000153201|chr2:108766505-108766506|-/TATCCTG|frameshift_variant;RANBP2|p.K1989Nfs*9|1|0.05|ENSG00000153201|chr2:108766505-108766506|-/TATCCTG|frameshift_variant;RANBP2|p.K1989Nfs*9|1|0.05|ENSG00000153201|chr2:108766505-108766506|-/TATCCTG|frameshift_variant;RANBP2|p.K2576Nfs*63|2|0.22|ENSG00000153201|chr2:108768262-108768262|A/-|frameshift_variant;RANBP2|p.K2576Nfs*63|2|0.22|ENSG00000153201|chr2:108768262-108768262|A/-|frameshift_variant;RANBP2|p.K2576Nfs*63|2|0.22|ENSG00000153201|chr2:108768262-108768262|A/-|frameshift_variant	88.17693792209575	0.07000514020414955	3				NaN	NaN	0	NaN	7722	5591	13314
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13316	39.635	NaN	2082.2	30	0	182.34	0.106	+			25323	LPCLAGRLCF	10	57	546.788267438374	1091.5619819435478	2	546.787353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LPCLAGRLCF_	CAPN10|p.S532Qfs*38|1|0.23|ENSG00000142330|chr2:240596785-240596786|-/G|frameshift_variant;ENSG00000142330|ENST00000391984|CAPN10;nc|ENSG00000142330|Q9HC96-2|CAPN10;nc|ENSG00000142330|Q9HC96-3|CAPN10;nc|ENSG00000142330|Q9HC96-4|CAPN10;nc|ENSG00000142330|Q9HC96-5|CAPN10;nc|ENSG00000142330|Q9HC96-6|CAPN10	45.9519527083369	0.4943008177357963	3				NaN	NaN	0	NaN	7723	5591	13314
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13317	39.637	NaN	1119	30	0	142.63	0.106			+	23190	KWSPHGELL	9	60	533.788330078125	NaN	0	533.788330078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KWSPHGELL_	REV__ENSG00000157368|ENST00000288098|IL34;REV__nc|ENSG00000157368|Q6ZMJ4-2|IL34	29.14955571784316	0.3303970763161698	3				NaN	NaN	0	NaN	7724	5591	13314
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13318	39.639	NaN	1075.1	30	0	74.976	0.034			+	49961	WAAFNNVL	8	47	467.74306294482307	933.4715729564462	2	467.7418212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_WAAFNNVL_	REV__ENSG00000117481|ENST00000474844|NSUN4;REV__ENST00000475281.1_1_1:46810505-46810817:+|nuORF;REV__ENST00000495427.1_2_1:46810505-46812688:+|nuORF;REV__nc|ENSG00000117481|Q96CB9-2|NSUN4;REV__nc|ENSG00000117481|Q96CB9-4|NSUN4	26.79610172149135	0.7524337208463756	3				NaN	NaN	0	NaN	7725	5591	13314
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13323	39.653	NaN	8105.2	30	0	900.2	0.214	+			40066	STNNWVLIK	9	72	537.8015255277977	1073.5884981223953	2	537.8013305664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STNNWVLIK_	ENSG00000065000|ENST00000643116|AP3D1;nc|ENSG00000065000|O14617-4|AP3D1;nc|ENSG00000065000|O14617|AP3D1	101.25262130126117	0.03792372629710479	3				NaN	NaN	0	NaN	7727	5594	13322
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13324	39.657	NaN	1683.1	30	0	90.916	0.035	+			28216	NAVKDFTSF	9	64	514.756561952917	1027.4985709726338	2	514.7560424804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NAVKDFTSF_	ENSG00000168769|ENST00000380013|TET2;nc|ENSG00000168769|Q6N021-2|TET2;nc|ENSG00000168769|Q6N021-3|TET2;TET2|p.M695Tfs*4|1|0.41|ENSG00000168769|chr4:105236026-105236029|TGTC/-|frameshift_variant;TET2|p.N202Tfs*5|1|0.32|ENSG00000168769|chr4:105234543-105234543|A/-|frameshift_variant;TET2|p.V1949Sfs*7|1|0.31|ENSG00000168769|chr4:105276348-105276349|-/A|frameshift_variant	87.69643885390035	0.07135982304947239	3				NaN	NaN	0	NaN	7728	5594	13322
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13329	39.671	NaN	739.2	30	0	160.41	0.143	+			37532	SLLRLKDY	8	29	336.5342405464103	NaN	0	336.5343322753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLLRLKDY_	ENSG00000099991|ENST00000263119|CABIN1;ENST00000484593.1_1_22:24462958-24467044:+|nuORF;nc|ENSG00000099991|Q9Y6J0-2|CABIN1	20.94693142431847	1.7418937515398478	3				NaN	NaN	0	NaN	7730	5597	13328
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13333	39.687	NaN	2614.2	30	0	517.65	0.214			+	51134	YNKLEEKMK	9	65	591.8109986230791	1181.607444312958	2	591.81103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YNKLEEKMK_	REV__tr|U7T8G3|U7T8G3_FUSNUCore-binding(CB)domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00045PE=4SV=1	58.78195531508484	0.22376836668196862	3				NaN	NaN	0	NaN	7731	5600	13332
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13334	39.69	NaN	2364.8	30	0	245.89	0.106	+			37229	SKNTQVCVKL	10	64	560.3126154682988	NaN	0	560.3130493164062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SKNTQVCVKL_	ENST00000476649.1_1_7:12662500-12665526:+|nuORF	51.19269402634007	0.2980620950593832	3				NaN	NaN	0	NaN	7732	5600	13332
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13335	39.692	NaN	1453.9	30	0	94.114	0.106	+			6620	AYQSVQETW	9	55	556.2568155855915	1110.499078237983	2	556.2559204101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AYQSVQETW_	ENSG00000204385|ENST00000229729|SLC44A4;nc|ENSG00000204385|Q53GD3-3|SLC44A4;nc|ENSG00000204385|Q53GD3-4|SLC44A4;SLC44A4|p.F618Sfs*25|1|0.43|ENSG00000204385|chr6:31864889-31864889|A/-|frameshift_variant;SLC44A4|p.G398Afs*7|1|0.29|ENSG00000204385|chr6:31869197-31869197|G/-|frameshift_variant;SLC44A4|p.S619Lfs*9|1|0.31|ENSG00000204385|chr6:31864888-31864889|-/A|frameshift_variant	110.11987700582712	0.028875675806141952	3				NaN	NaN	0	NaN	7733	5600	13332
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13336	39.694	NaN	1518	30	0	109.76	0.035			+	51353	YSWKTIDL	8	59	513.2707448343592	NaN	0	513.271240234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YSWKTIDL_	REV__ENSG00000122224|ENST00000263285|LY9;REV__ENST00000471816.1_1_1:160766002-160783471:+|nuORF;REV__ENST00000474998.1_1_1:160766002-160769898:+|nuORF;REV__ENST00000490902.1_1_1:160768767-160771704:+|nuORF;REV__nc|ENSG00000122224|Q9HBG7-2|LY9;REV__nc|ENSG00000122224|Q9HBG7-3|LY9;REV__nc|ENSG00000122224|Q9HBG7-4|LY9	49.44154591367651	1.7418937515398478	3				NaN	NaN	0	NaN	7734	5600	13332
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13340	39.708	NaN	1522.5	30	0	81.708	0.144			+	25938	LSHKVLTCY	9	63	532.282998903041	NaN	0	532.2836303710938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSHKVLTCY_	REV__ENST00000404141.5_1_7:154753335-154754148:-|nuORF	39.252832667884924	0.27938773122138094	3				NaN	NaN	0	NaN	7735	5603	13339
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13352	39.757	NaN	2470	30	0	251.89	0.145			+	17082	HRVCMFLIY	9	65	591.3025677755293	1180.5905826178584	2	591.3024291992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HRVCMFLIY_	REV__ENSG00000197535|ENST00000399233|MYO5A;REV__nc|ENSG00000197535|Q9Y4I1-2|MYO5A;REV__nc|ENSG00000197535|Q9Y4I1|MYO5A	44.53106598305862	0.36711179743858174	3				NaN	NaN	0	NaN	7738	5612	13351
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13356	39.773	NaN	2979.3	30	0	717.91	0.141	+			11166	FGPGPGSNF	9	52	440.2038304257063	878.3931079182126	2	440.2036437988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FGPGPGSNF_	ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;ENST00000495810.1_1_7:26235422-26236427:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1	93.19546047674547	0.05585629608842056	3				NaN	NaN	0	NaN	7739	5615	13355
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13362	39.79	NaN	1528.3	30	0	106.77	0.144	+			6505	AYAIIKEEL	9	56	525.2986184610048	1048.5826839888095	2	525.2963256835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AYAIIKEEL_	ENSG00000156802|ENST00000287394|ATAD2;ENST00000517666.5_1_8:124333376-124408650:-|nuORF	82.24051045832904	0.08786059719216216	3				NaN	NaN	0	NaN	7742	5618	13361
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13366	39.806	NaN	1376.2	30	0	113.15	0.143	+			35536	SAVLFTITK	9	50	490.2954388067633	978.5763246803266	2	490.2948303222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAVLFTITK_	ENSG00000177189|ENST00000379565|RPS6KA3;RPS6KA3|p.N713Rfs*13|1|0.08|ENSG00000177189|chrX:20155483-20155484|-/AGCACAAGTTC|frameshift_variant	47.95952297671804	0.32689736945648856	3				NaN	NaN	0	NaN	7743	5621	13365
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13371	39.823	NaN	1864.3	30	0	172.63	0.144	+			27429	MLDNLTVHP	9	61	528.2645776332275	NaN	0	528.26611328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))LDNLTVHP_	CNOT6L|p.A163T|1|0.4|ENSG00000138767|chr4:77756865-77756865|C/T|missense_variant	51.33545320467046	0.19748963086191895	3				NaN	NaN	0	NaN	7745	5624	13370
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13375	39.84	NaN	3391.6	30	0	407.48	0.214				-1	 	0	70	530.2618194629794	1058.5090859927586	2	530.2625122070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7746	5627	13374
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13376	39.843	NaN	1506	30	0	105.82	0.035	+			10505	EVTMSPAIAI	10	55	516.2761151990984	NaN	0	516.277099609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EVTMSPAIAI_	ENSG00000123104|ENST00000381340|ITPR2	44.116797842482775	0.3427969396372342	3				NaN	NaN	0	NaN	7747	5627	13374
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13381	39.858	NaN	3585.2	30	0	692.67	0.214	+			38748	SSLPTQLFK	9	60	510.79027032971953	1019.5659877262391	2	510.78973388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSLPTQLFK_	ENSG00000017427|ENST00000337514|IGF1;nc|ENSG00000017427|P05019-4|IGF1;nc|ENSG00000017427|P05019|IGF1	77.53327743719008	0.1082147015697554	3				NaN	NaN	0	NaN	7749	5630	13380
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13382	39.861	NaN	1131.3	30	0	60.176	0.039				-1	ICQTAVWYAVS	11	53	649.3168334960938	NaN	0	649.3168334960938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_IC(Carbamidomethyl (C))QTAVWYAVS_	ENSG00000242866|ENST00000450892|STRC;nc|ENSG00000290691|A6NGW2|STRCP1;STRC|p.V1549Gfs*8|1|0.04|ENSG00000242866|chr15:43601451-43601452|-/CAGAC|frameshift_variant	19.996771675451527	0.456735970842152	3				NaN	NaN	0	NaN	7750	5630	13380
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13389	39.892	NaN	975.79	30	0	124.21	0.214	+			45014	TVFAVGNPS	9	44	446.232729568093	890.4509062029861	2	446.2326354980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVFAVGNPS_	nc|ENSG00000148288|Q8N5D6-2|GBGT1	39.252832667884924	0.4290233611298554	3				NaN	NaN	0	NaN	7751	5636	13388
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13390	39.896	NaN	1384.7	30	0	256.18	0.035	+			43191	TEVDAKPLE	9	53	501.26040814514005	1000.5062633570801	2	501.2608337402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEVDAKPLE_	tr|U7SSD6|U7SSD6_FUSNUOmpA-likedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01596PE=4SV=1	44.377184641726394	0.36891676396732553	3				NaN	NaN	0	NaN	7752	5636	13388
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13406	39.96	NaN	1296.2	30	0	84.115	0.214	+			8001	DTINLLASL	9	59	480.27328393655296	NaN	0	480.27337646484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DTINLLASL_	ENSG00000198626|ENST00000366574|RYR2;nc|ENSG00000198626|Q92736-2|RYR2;RYR2|p.A2213Lfs*22|1|0.28|ENSG00000198626|chr1:237633654-237633654|A/-|frameshift_variant;RYR2|p.D3347Tfs*10|1|0.36|ENSG00000198626|chr1:237708990-237708990|G/-|frameshift_variant;RYR2|p.L2146Gfs*3|1|0.05|ENSG00000198626|chr1:237628075-237628076|-/GGTCT|frameshift_variant;RYR2|p.S4583Lfs*11|1|0.45|ENSG00000198626|chr1:237792286-237792286|T/-|frameshift_variant	42.396135135203025	0.2590952873412954	3				NaN	NaN	0	NaN	7756	5648	13405
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13407	39.964	NaN	1206.5	30	0	213.57	0.106			+	29847	PLATSPAPL	9	45	433.7530047667988	865.4914566003977	2	433.752197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PLATSPAPL_	REV__ENST00000454665.6_1_6:27222493-27222541:+|nuORF	47.91560031466742	0.327412564698279	3				NaN	NaN	0	NaN	7757	5648	13405
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13408	39.966	NaN	1055.4	30	0	69.804	0.106	+			13396	GLEGGGIFFL	10	59	505.2733154296875	NaN	0	505.2733154296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GLEGGGIFFL_	ENST00000605945.1_1_6:28048508-28048712:-|nuORF	30.503639358989545	0.4000169810673414	3				NaN	NaN	0	NaN	7758	5648	13405
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13409	39.967	NaN	2400.8	30	0	170.35	0.037	+			22564	KTSNLENVKF	10	65	590.3230000048312	1178.6314470764623	2	590.8230590820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTSNLENVKF_	ENSG00000150540|ENST00000280097|HNMT;ENST00000467390.5_1_2:138722061-138759907:+|nuORF;HNMT|p.Q192Pfs*3|1|0.33|ENSG00000150540|chr2:138013821-138013822|-/C|frameshift_variant	23.52269567125451	0.6877354443478558	3				NaN	NaN	0	NaN	7759	5648	13405
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13413	39.982	NaN	710.67	30	0	137.66	0.214				-1	 	0	35	373.0452203994905	372.0379439328905	1	373.04461669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7760	5651	13412
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13414	39.985	NaN	1378	30	0	80.198	0.044	+			32599	QYIREREWNRR	11	57	535.9513022796459	NaN	0	535.6166381835938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QYIREREWNRR_	ENSG00000162614|ENST00000334785|NEXN;nc|ENSG00000162614|Q0ZGT2-2|NEXN;nc|ENSG00000162614|Q0ZGT2-3|NEXN;NEXN|p.E240Nfs*8|1|0.31|ENSG00000162614|chr1:77926739-77926739|A/-|frameshift_variant;NEXN|p.I467*|2|0.39|ENSG00000162614|chr1:77935964-77935964|A/-|frameshift_variant;NEXN|p.N590Tfs*5|1|0.2|ENSG00000162614|chr1:77942566-77942566|A/-|frameshift_variant	9.64613948735714	0.456735970842152	3				NaN	NaN	0	NaN	7761	5651	13412
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13421	40.016	NaN	1783.2	30	0	127.54	0.215				-1	IYLILICTM	9	61	549.8015790396548	1097.5886051461096	2	549.8013916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_IYLILICTM(Oxidation (M))_	tr|U7T2F8|U7T2F8_FUSNUEamAdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00551PE=4SV=1	31.954861631926434	0.5046124803899898	3				NaN	NaN	0	NaN	7762	5657	13420
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13422	40.02	NaN	1212.7	30	0	164.07	0.035	+			26940	LYGKIAEAF	9	57	506.28001361026674	1010.5454742873335	2	506.27923583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LYGKIAEAF_	ENSG00000123159|ENST00000393033|GIPC1;ENST00000587811.1_1_19:14593203-14593794:-|nuORF;GIPC1|p.G115Afs*13|1|0.3|ENSG00000123159|chr19:14480723-14480723|C/-|frameshift_variant;GIPC1|p.R91H|1|0.19|ENSG00000123159|chr19:14482705-14482705|C/T|missense_variant	66.42927471994793	0.16001998865088202	3				NaN	NaN	0	NaN	7763	5657	13420
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13432	40.067	NaN	1355.6	30	0	236.21	0.143			+	13388	GLDLLAPWL	9	51	499.2903134484109	996.5660739636219	2	499.28973388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GLDLLAPWL_	REV__ENST00000570817.5_1_17:79163571-79163706:-|nuORF	31.954861631926434	0.5046124803899898	3				NaN	NaN	0	NaN	7764	5666	13431
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13437	40.084	NaN	1404	30	0	188.14	0.215	+			48234	VTCGPPDTIV	10	55	501.25138593320924	1000.4882189332185	2	501.25030517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTCGPPDTIV_	UNC5D|p.M610T|1|0.29|ENSG00000156687|chr8:35748589-35748589|T/C|missense_variant	44.116797842482775	0.5112108506279902	3				NaN	NaN	0	NaN	7766	5669	13436
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13438	40.087	NaN	1966.8	30	0	303.14	0.035	+			4085	ATDLTFLEK	9	62	519.280071461899	1036.5455899905978	2	519.279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATDLTFLEK_	ENSG00000197879|ENST00000648651|MYO1C;ENST00000573961.1_1_17:1380797-1381223:-|nuORF;nc|ENSG00000197879|O00159-2|MYO1C;nc|ENSG00000197879|O00159-3|MYO1C	56.43379154798735	0.2433427591689151	3				NaN	NaN	0	NaN	7767	5669	13436
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13446	40.118	NaN	3715.5	30	0	509.63	0.143	+			47209	VMAPRTVLL	9	60	500.3053646594932	998.5961763857864	2	500.3046569824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VMAPRTVLL_	ENSG00000234745|ENST00000412585|HLA-B;ENST00000434333.1_1_6:31324722-31324935:-|nuORF;ENST00000498007.1_1_6:31324459-31324935:-|nuORF;HLA-B|p.G124Wfs*15|1|0.18|ENSG00000234745|chr6:31356416-31356417|-/A|frameshift_variant;HLA-B|p.H215Tfs*11|1|0.35|ENSG00000234745|chr6:31355569-31355569|G/-|frameshift_variant;HLA-B|p.P209Qfs*5|6|0.16|ENSG00000234745|chr6:31355586-31355586|G/-|frameshift_variant;HLA-B|p.P81Rfs*70|1|0.56|ENSG00000234745|chr6:31356791-31356791|C/-|frameshift_variant;HLA-B|p.R72Gfs*5|1|0.25|ENSG00000234745|chr6:31356818-31356818|C/-|frameshift_variant;HLA-B|p.V306Afs*13|1|0.49|ENSG00000234745|chr6:31355202-31355202|A/-|frameshift_variant;HLA-B|p.V312Cfs*22|1|0.28|ENSG00000234745|chr6:31355185-31355186|-/A|frameshift_variant	37.81151784470057	0.4459294069877048	3				NaN	NaN	0	NaN	7769	5675	13445
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13450	40.135	NaN	2259.5	30	0	143.4	0.214	+			42066	SYASEIKEL	9	63	520.269310110284	1038.5240672873679	2	520.2689819335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SYASEIKEL_	ENSG00000149639|ENST00000237536|SOGA1;nc|ENSG00000149639|O94964-1|MTCL2;nc|ENSG00000149639|O94964-4|MTCL2;SOGA1|p.D1221Gfs*26|1|0.3|ENSG00000149639|chr20:36794420-36794421|-/C|frameshift_variant	49.44154591367651	0.3095138337212152	3				NaN	NaN	0	NaN	7770	5678	13449
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13451	40.139	NaN	1676.5	30	0	207.79	0.033			+	25462	LPQLPGEK	8	42	441.25872246267693	880.5028919921539	2	441.2577819824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LPQLPGEK_	REV__ENSG00000135749|ENST00000258229|PCNX2;REV__ENST00000324142.4_1_1:233337898-233388268:-|nuORF;REV__nc|ENSG00000135749|A6NKB5-2|PCNX2	53.351449002276354	0.5676011784961348	3				NaN	NaN	0	NaN	7771	5678	13449
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13455	40.153	NaN	1816	30	0	184.28	0.214			+	33994	RSGPSAPFPSP	11	64	550.2806396484375	NaN	0	550.2806396484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RSGPSAPFPSP_	REV__ENST00000324225.8_1_11:117049569-117049740:+|nuORF	38.753607047826485	0.39270760338352134	3				NaN	NaN	0	NaN	7772	5681	13454
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13456	40.156	NaN	1572.5	30	0	252.64	0.035				-1	VALLLFLPS	9	56	507.8136848461912	NaN	0	507.8140869140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))VALLLFLPS_	ENST00000533687.1_1_11:118969111-118971155:-|nuORF	40.5726180659479	0.27166212580479165	3				NaN	NaN	0	NaN	7773	5681	13454
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13465	40.189	NaN	4903.3	30	0	613.69	0.214				-1	 	0	68	496.79288452771783	991.5712161222357	2	496.79217529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7776	5687	13464
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13466	40.192	NaN	2229.9	30	0	272.48	0.106	+			21528	KNSKMTQII	9	59	531.8009809640893	1061.5874089949784	2	532.3016357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KNSKMTQII_	ENST00000481981.1_1_1:229422256-229424499:+|nuORF	42.86426827375447	0.38666266728046506	3				NaN	NaN	0	NaN	7777	5687	13464
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13467	40.194	NaN	906.32	30	0	130.56	0.106			+	23535	LAIQGSAPLL	10	54	491.7999267578125	NaN	0	491.7999267578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LAIQGSAPLL_	REV__ENSG00000178896|ENST00000316052|EXOSC4	34.172542307311794	0.38797011891751465	3				NaN	NaN	0	NaN	7778	5687	13464
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13468	40.196	NaN	1170.7	30	0	78.756	0.106			+	1505	AFYHPPLLT	9	54	529.7871999036241	1057.5598468740482	2	529.7874755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AFYHPPLLT_	REV__ENST00000274458.8_1_5:115628182-115628326:+|nuORF	37.028477286268924	0.45511415925449533	3				NaN	NaN	0	NaN	7779	5687	13464
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13469	40.198	NaN	1135.1	30	0	67.037	0.036			+	1500	AFTTYGLDLL	10	57	557.2969970703125	NaN	0	557.2969970703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AFTTYGLDLL_	REV__DNAH12|p.E1339Gfs*6|1|0.27|ENSG00000174844|chr3:57446125-57446126|-/C|frameshift_variant;REV__DNAH12|p.F1712Lfs*4|1|0.34|ENSG00000174844|chr3:57428681-57428681|A/-|frameshift_variant;REV__DNAH12|p.H2653Sfs*22|1|0.24|ENSG00000174844|chr3:57314595-57314596|-/A|frameshift_variant;REV__DNAH12|p.K1023Nfs*9|3|0.34|ENSG00000174844|chr3:57457919-57457919|T/-|frameshift_variant;REV__DNAH12|p.L560*|1|0.37|ENSG00000174844|chr3:57472643-57472643|A/-|frameshift_variant;REV__ENSG00000174844|ENST00000495027|DNAH12;REV__nc|ENSG00000174844|Q6ZR08-4|DNAH12;REV__nc|ENSG00000174844|Q6ZR08|DNAH12	34.172542307311794	0.38797011891751465	3				NaN	NaN	0	NaN	7780	5687	13464
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13473	40.211	NaN	1855.2	30	0	292.38	0.214			+	8241	EAFLKMTQK	9	66	548.2956285468603	1094.5767041605204	2	548.29541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EAFLKMTQK_	REV__ENSG00000126698|ENST00000263697|DNAJC8;REV__ENST00000489277.5_1_1:28527761-28556683:-|nuORF	51.19269402634007	0.2889735674168909	3				NaN	NaN	0	NaN	7781	5690	13472
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13474	40.215	NaN	1362.8	30	0	138.08	0.106	+			35913	SEFPIRTL	8	50	481.7690101925516	NaN	0	481.76812744140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEFPIRTL_	CKAP5|p.V1971Lfs*42|1|0.03|ENSG00000175216|chr11:46744211-46744212|-/TTGAAAAAAAG|frameshift_variant;ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5	35.61828744233558	1.7418937515398478	3				NaN	NaN	0	NaN	7782	5690	13472
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13475	40.217	NaN	917.79	30	0	98.212	0.034			+	47435	VPSWGGTMP	9	40	466.2217200136736	NaN	0	466.22216796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VPSWGGTMP_	REV__ENST00000575277.1_1_16:67976333-67976859:-|nuORF	24.20275056022122	0.35506675290109213	3				NaN	NaN	0	NaN	7783	5690	13472
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13481	40.234	NaN	6023.4	30	0	1190.4	0.214				-1	 	0	59	483.2691521143185	964.523751295437	2	483.26873779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7786	5693	13480
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13482	40.237	NaN	1598	30	0	166.5	0.106	+			36995	SIPGGYNAL	9	45	446.232729568093	890.4509062029861	2	446.2322692871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SIPGGYNAL_	ENSG00000135018|ENST00000376395|UBQLN1;ENSG00000160803|ENST00000368309|UBQLN4;ENSG00000188021|ENST00000338222|UBQLN2;ENST00000533705.5_1_9:86284090-86294929:-|nuORF;nc|ENSG00000135018|Q9UMX0-2|UBQLN1;nc|ENSG00000135018|Q9UMX0-3|UBQLN1;UBQLN2|p.N281Sfs*92|1|0.34|ENSG00000188021|chrX:56564713-56564725|GAATGCCGCACAA/-|frameshift_variant;UBQLN2|p.P525Lfs*71|10|0.37|ENSG00000188021|chrX:56565441-56565441|C/-|frameshift_variant;UBQLN4|p.A385Pfs*7|1|0.03|ENSG00000160803|chr1:156042886-156042887|GC/-|frameshift_variant;UBQLN4|p.R283H|1|0.14|ENSG00000160803|chr1:156048553-156048553|C/T|missense_variant	74.25504064058377	0.12238981753128622	3				NaN	NaN	0	NaN	7787	5693	13480
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13483	40.239	NaN	2308.8	30	0	131.29	0.035			+	-1	MQILCVIY	8	59	520.269310110284	1038.5240672873679	2	520.783447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_MQILC(Carbamidomethyl (C))VIY_	REV__ENSG00000183313|ENST00000332249|OR52L1	52.29916861842294	0.578018602984656	3				NaN	NaN	0	NaN	7788	5693	13480
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13490	40.27	NaN	933.55	30	0	153.82	0.214	+			10797	FAIPKEKD	8	43	474.264153143279	946.513753353358	2	474.2633056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FAIPKEKD_	ENSG00000164946|ENST00000380880|FREM1;FREM1|p.S1085Afs*5|1|0.39|ENSG00000164946|chr9:14806682-14806682|T/-|frameshift_variant;FREM1|p.S839Lfs*8|1|0.23|ENSG00000164946|chr9:14819265-14819265|A/-|frameshift_variant;FREM1|p.T1560Qfs*46|1|0.35|ENSG00000164946|chr9:14775969-14775969|C/-|frameshift_variant	44.53106598305862	0.628196326904373	3				NaN	NaN	0	NaN	7789	5699	13489
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13491	40.273	NaN	2530.1	30	0	252.92	0.106	+			33969	RSEKPPWY	8	55	531.771439435676	1061.528325938152	2	531.7713623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RSEKPPWY_	ENSG00000168781|ENST00000420765|PPIP5K1;nc|ENSG00000168781|Q6PFW1-2|PPIP5K1;nc|ENSG00000168781|Q6PFW1-3|PPIP5K1;nc|ENSG00000168781|Q6PFW1-4|PPIP5K1;nc|ENSG00000168781|Q6PFW1|PPIP5K1	33.51558372728122	0.7005509609380386	3				NaN	NaN	0	NaN	7790	5699	13489
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13492	40.275	NaN	1595.1	30	0	241.11	0.036	+			36438	SEVCQQPVY	9	54	526.7381804653976	1051.461807997595	2	526.7377319335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEVCQQPVY_	ENSG00000184507|ENST00000537011|NUTM1;nc|ENSG00000184507|Q86Y26-3|NUTM1;nc|ENSG00000184507|Q86Y26|NUTM1;NUTM1|p.G519Afs*26|2|0.3|ENSG00000184507|chr15:34355644-34355644|G/-|frameshift_variant;NUTM1|p.K444Nfs*8|1|0.34|ENSG00000184507|chr15:34355070-34355070|A/-|frameshift_variant;NUTM1|p.M697Wfs*28|1|0.12|ENSG00000184507|chr15:34356176-34356176|C/-|frameshift_variant;NUTM1|p.Q931Kfs*53|1|0.37|ENSG00000184507|chr15:34356879-34356879|C/-|frameshift_variant	53.351449002276354	0.2690372970092375	3				NaN	NaN	0	NaN	7791	5699	13489
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13505	40.321	NaN	1302.7	30	0	183.79	0.145			+	51563	YYHDALWLAI	10	59	632.8213150207334	1263.6280771082668	2	632.8200073242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YYHDALWLAI_	REV__ENSG00000159363|ENST00000326735|ATP13A2;REV__nc|ENSG00000159363|Q9NQ11-2|ATP13A2;REV__nc|ENSG00000159363|Q9NQ11-3|ATP13A2	23.04248740728303	0.69165701907106	3				NaN	NaN	0	NaN	7795	5708	13504
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13512	40.352	NaN	2159.9	30	0	121.38	0.214	+			3583	ASVFGTMPLK	10	62	525.7862307993009	1049.5579086654018	2	525.7867431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASVFGTMPLK_	ENSG00000151348|ENST00000533608|EXT2;nc|ENSG00000151348|Q93063-2|EXT2;nc|ENSG00000151348|Q93063-3|EXT2	56.43379154798735	0.3982744522255666	3				NaN	NaN	0	NaN	7796	5714	13511
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13513	40.356	NaN	1714.1	30	0	261.45	0.106	+			45877	VANPNSAIF	9	48	466.7452996828275	931.4760464324551	2	466.7451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VANPNSAIF_	ENSG00000106682|ENST00000265753|EIF4H;nc|ENSG00000106682|Q15056-2|EIF4H	42.86426827375447	0.38666266728046506	3				NaN	NaN	0	NaN	7797	5714	13511
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13514	40.358	NaN	2426.7	30	0	401.68	0.106			+	6766	CEMITNRIL	9	62	546.7808364829173	1091.5471200326344	2	546.780029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_CEMITNRIL_	REV__ENSG00000169231|ENST00000368378|THBS3;REV__ENST00000486260.5_1_1:155170782-155176189:-|nuORF;REV__ENST00000541990.5_1_1:155170782-155174851:-|nuORF;REV__nc|ENSG00000169231|P49746-2|THBS3	45.02220120713402	0.3613509778819777	3				NaN	NaN	0	NaN	7798	5714	13511
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13515	40.359	NaN	1571.7	30	0	100.26	0.039	+			38614	SSGSLAAG	8	57	649.3171686833225	648.3098922167225	1	649.3163452148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSGSLAAG_	CAPN12|p.R119Gfs*47|1|0.43|ENSG00000182472|chr19:38742481-38742481|G/-|frameshift_variant	4.6817480819748125	0.7764044737779935	3				NaN	NaN	0	NaN	7799	5714	13511
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13519	40.373	NaN	747.7	30	0	51.934	0.142			+	43529	TGTLGLIVM	9	44	452.7618408203125	NaN	0	452.7618408203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TGTLGLIVM_	REV__tr|U7T0W6|U7T0W6_FUSNUMFStransporter,AGZAfamily,xanthine/uracilpermeaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00716PE=4SV=1	25.450171626174864	0.34907449758287085	3				NaN	NaN	0	NaN	7800	5717	13518
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13526	40.406	NaN	1139.8	30	0	79.282	0.143			+	25148	LLSLACVDL	9	56	502.2787778131111	1002.5430026930222	2	502.2781982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_LLSLAC(Carbamidomethyl (C))VDL_	REV__ENST00000327783.8_2_21:30953842-30959745:-|nuORF	53.351449002276354	0.2690372970092375	3				NaN	NaN	0	NaN	7801	5723	13525
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13530	40.422	NaN	1840	30	0	101.84	0.152			+	30446	PYRFKEYLWRF	11	62	535.6175422735603	NaN	0	535.6170043945312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PYRFKEYLWRF_	REV__ENSG00000167904|ENST00000434581|TMEM68	9.21180021271957	0.456735970842152	3				NaN	NaN	0	NaN	7802	5726	13529
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13534	40.437	NaN	930.77	30	0	105.83	0.141	+			51462	YVGHPVSV	8	40	429.2293458740322	NaN	0	429.22979736328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YVGHPVSV_	ENSG00000165891|ENST00000322886|E2F7;nc|ENSG00000165891|Q96AV8-3|E2F7	35.200714571348534	1.7418937515398478	3				NaN	NaN	0	NaN	7803	5729	13533
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13541	40.458	NaN	723.03	30	0	181.4	0.143				-1	ASMKKVKSL	9	28	336.5342712402344	NaN	0	336.5342712402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ASM(Oxidation (M))KKVKSL_	ENST00000369426.9_1_1:119575536-119588262:-|nuORF	20.94693142431847	0.3660861156085067	3				NaN	NaN	0	NaN	7807	5732	13540
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13545	40.475	NaN	1048.9	30	0	74.385	0.214	+			36353	SESTLALRL	9	44	495.28472900390625	NaN	0	495.28472900390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SESTLALRL_	DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;ENSG00000187908|ENST00000338354|DMBT1;nc|ENSG00000187908|Q9UGM3-2|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-4|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-8|DMBT1;nc|ENSG00000187908|Q9UGM3-9|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1	32.81241826257853	0.3119040447479903	3				NaN	NaN	0	NaN	7808	5735	13544
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13546	40.478	NaN	1149.9	30	0	213.58	0.106			+	21524	KNRSQIDAL	9	48	522.795654296875	NaN	0	522.795654296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KNRSQIDAL_	REV__ENSG00000095627|ENST00000695399|TDRD1;REV__nc|ENSG00000095627|Q9BXT4-3|TDRD1;REV__nc|ENSG00000095627|Q9BXT4-4|TDRD1	27.882242232435846	0.3367954786602879	3				NaN	NaN	0	NaN	7809	5735	13544
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13547	40.48	NaN	1590.9	30	0	225.73	0.106				-1	WRRCQKCVWKF	11	54	551.947021484375	NaN	0	551.947021484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_WRRC(Carbamidomethyl (C))QKC(Carbamidomethyl (C))VWKF_	ENSG00000162975|ENST00000295082|KCNF1	1.4187509189679102	0.456735970842152	3				NaN	NaN	0	NaN	7810	5735	13544
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13548	40.482	NaN	1613.9	30	0	154.42	0.035			+	-1	KFCKKLCL	8	57	520.2930787570917	NaN	0	520.291748046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_KFCKKLC(Carbamidomethyl (C))L_	REV__ENST00000556380.3_1_14:35480803-35482576:+|nuORF	35.200714571348534	1.7418937515398478	3				NaN	NaN	0	NaN	7811	5735	13544
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13559	40.529	NaN	1968.5	30	0	367.93	0.142	+			18848	IVALILSTK	9	57	479.32141295746857	956.6282729817372	2	479.3207092285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IVALILSTK_	ENSG00000185883|ENST00000330398|ATP6V0C	65.46538089061403	0.16805504838372562	3				NaN	NaN	0	NaN	7813	5744	13558
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13564	40.545	NaN	1776.1	30	0	134.2	0.214			+	24879	LKHGDFSL	8	53	458.7483281688616	915.4821034045232	2	458.74786376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LKHGDFSL_	REV__nc|ENSG00000144559|Q96BW9|TAMM41	60.97194046774394	0.49215940876911696	3				NaN	NaN	0	NaN	7815	5747	13563
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13565	40.548	NaN	1422.8	30	0	113.6	0.036	+			43012	TEKQLQVLL	9	60	536.3250583705641	1070.635563807928	2	536.8262329101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEKQLQVLL_	ENSG00000120800|ENST00000261637|UTP20	42.396135135203025	0.392153681582562	3				NaN	NaN	0	NaN	7816	5747	13563
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13572	40.578	NaN	2141.6	30	0	283.47	0.214				-1	 	0	55	483.2691521143185	964.523751295437	2	483.26910400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7817	5753	13571
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13573	40.581	NaN	655.94	30	0	55.164	0.106			+	26160	LSQSGTWI	8	40	446.23260880672154	890.4506646802431	2	446.2322998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSQSGTWI_	REV__PLA2R1|p.H662Tfs*26|1|0.13|ENSG00000153246|chr2:159987210-159987210|A/-|frameshift_variant	30.503639358989545	0.7238069182250283	3				NaN	NaN	0	NaN	7818	5753	13571
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13574	40.583	NaN	2822.7	30	0	309.3	0.106	+			36267	SENNRIFTL	9	62	547.2854295311294	1092.5563061290586	2	547.2872924804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SENNRIFTL_	ENSG00000156110|ENST00000539909|ADK;nc|ENSG00000156110|P55263-2|ADK;nc|ENSG00000156110|P55263-4|ADK	40.05817265558897	0.419577045485086	3				NaN	NaN	0	NaN	7819	5753	13571
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13575	40.585	NaN	1968.5	30	0	211.79	0.035	+			8301	EAIRISPTF	9	60	517.2876063913245	1032.560659849449	2	517.2879028320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EAIRISPTF_	ENSG00000147162|ENST00000373719|OGT;nc|ENSG00000147162|O15294-2|OGT;nc|ENSG00000147162|O15294-3|OGT;nc|ENSG00000147162|O15294-4|OGT	64.20726635412375	0.17854274437659667	3				NaN	NaN	0	NaN	7820	5753	13571
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13579	40.599	NaN	475.12	30	0	35.4	0.139	+			29997	PPGVAGPV	8	38	347.1987952593938	NaN	0	347.1988220214844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PPGVAGPV_	ENST00000223357.7_1_7:44144296-44144407:+|nuORF	24.504012794735996	1.7418937515398478	3				NaN	NaN	0	NaN	7821	5756	13578
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13583	40.616	NaN	2273.5	30	0	291.61	0.144	+			10904	FDGLEYDY	8	60	511.2097741240205	1020.404995314841	2	511.20867919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FDGLEYDY_	ENSG00000165899|ENST00000547103|OTOGL;OTOGL|p.C2147Mfs*2|1|0.4|ENSG00000165899|chr12:80367723-80367724|-/A|frameshift_variant;OTOGL|p.K2146Nfs*40|2|0.16|ENSG00000165899|chr12:80367724-80367724|A/-|frameshift_variant	42.47446043378293	0.6409579893742323	3				NaN	NaN	0	NaN	7822	5759	13582
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13587	40.633	NaN	3865.5	30	0	445.03	0.214	+			40636	SVAQLLLSK	9	59	479.8008576610475	957.587162388895	2	479.8003234863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVAQLLLSK_	ENSG00000073614|ENST00000399788|KDM5A;ENST00000541335.1_1_12:431581-432275:-|nuORF;KDM5A|p.G1200Dfs*9|1|0.28|ENSG00000073614|chr12:307787-307787|T/-|frameshift_variant;KDM5A|p.V1093*|1|0.32|ENSG00000073614|chr12:309905-309905|T/-|frameshift_variant;KDM5A|p.V1093Sfs*20|1|0.21|ENSG00000073614|chr12:309904-309905|-/T|frameshift_variant;nc|ENSG00000073614|P29375-2|KDM5A	89.02883481214508	0.06760336634167786	3				NaN	NaN	0	NaN	7823	5762	13586
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13588	40.637	NaN	1324.3	30	0	135.65	0.034	+			3250	ASLGFLVAK	9	51	453.2761688578563	NaN	0	453.276611328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASLGFLVAK_	ENSG00000197363|ENST00000359971|ZNF517;ZNF517|p.C121Afs*105|2|0.1|ENSG00000197363|chr8:144807272-144807272|G/-|frameshift_variant	56.72105179125745	0.16330365735109603	3				NaN	NaN	0	NaN	7824	5762	13586
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13593	40.651	NaN	1452	30	0	126.36	0.215			+	17985	IHLPEQDSL	9	58	526.275239244657	1050.5359255561139	2	526.2762451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IHLPEQDSL_	REV__SERPINE1|p.V340I|1|0.31|ENSG00000106366|chr7:101135732-101135732|G/A|missense_variant	44.116797842482775	0.37197099687881774	3				NaN	NaN	0	NaN	7826	5765	13592
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13594	40.654	NaN	972.29	30	0	49.813	0.037	+			25743	LRYVCVYIK	9	54	578.8324368044513	1155.6503206757025	2	578.8331909179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LRYVCVYIK_	ENST00000228827.7_1_12:110890303-110890486:-|nuORF	29.14955571784316	0.5308295550522326	3				NaN	NaN	0	NaN	7827	5765	13592
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13598	40.668	NaN	3061.7	30	0	406.84	0.214	+			8204	EADKIGLLL	9	64	486.2926930657091	970.5708331982182	2	486.2920837402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EADKIGLLL_	ENSG00000162600|ENST00000371226|OMA1;ENST00000467509.5_1_1:58881067-58996314:-|nuORF;ENST00000485760.5_1_1:58809069-58993004:-|nuORF;nc|ENSG00000162600|Q96E52-2|OMA1	52.936696900407355	0.27249468807391813	3				NaN	NaN	0	NaN	7828	5768	13597
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13599	40.672	NaN	1282.2	30	0	101.26	0.035				-1	ISLLNCKF	8	56	497.77437396797654	993.5341950027531	2	497.77313232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_ISLLNC(Carbamidomethyl (C))KF_	ENST00000294661.8_1_1:85717306-85717453:-|nuORF	58.78195531508484	0.5138399468736706	3				NaN	NaN	0	NaN	7829	5768	13597
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13606	40.702	NaN	1327.3	30	0	376.74	0.143			+	21234	KLIGAGQCAE	10	45	495.25797151844483	NaN	0	495.25799560546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KLIGAGQCAE_	REV__tr|U7SV28|U7SV28_FUSNUUvrABCsystemproteinAOS=FusobacteriumnucleatumCTI-5OX=1316586GN=uvrAPE=3SV=1	34.172542307311794	0.38797011891751465	3				NaN	NaN	0	NaN	7830	5774	13605
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13610	40.718	NaN	1996.2	30	0	322.66	0.214	+			8469	EASKLLLTY	9	61	519.2977579040312	1036.5809628748623	2	519.29736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EASKLLLTY_	ENSG00000151092|ENST00000280700|NGLY1;ENST00000463611.1_1_3:25824608-25824881:-|nuORF;ENST00000474611.1_1_3:25819310-25824959:-|nuORF;ENST00000478991.1_1_3:25819998-25824881:-|nuORF;ENST00000493324.5_1_3:25778798-25824881:-|nuORF;nc|ENSG00000151092|Q96IV0-2|NGLY1;nc|ENSG00000151092|Q96IV0-3|NGLY1;NGLY1|p.I101Nfs*3|1|0.22|ENSG00000151092|chr3:25764256-25764257|-/T|frameshift_variant	76.7741389293348	0.11149722112137898	3				NaN	NaN	0	NaN	7831	5777	13609
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13611	40.722	NaN	1357.2	30	0	171.54	0.034			+	50052	WESIIVDV	8	53	480.7531376435483	NaN	0	480.75274658203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WESIIVDV_	REV__ENSG00000185238|ENST00000331079|PRMT3;REV__nc|ENSG00000185238|O60678-2|PRMT3	38.80614096846853	1.7418937515398478	3				NaN	NaN	0	NaN	7832	5777	13609
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13616	40.736	NaN	1581.7	30	0	192.57	0.142	+			3572	ASVAWAVLK	9	51	472.7822209953761	943.5498890575523	2	472.78118896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASVAWAVLK_	ENSG00000106714|ENST00000297668|CNTNAP3;ENSG00000154529|ENST00000377561|CNTNAP3B;ENSG00000283378|ENST00000636699|CNTNAP3C;nc|ENSG00000154529|Q96NU0-2|CNTNAP3B;nc|ENSG00000283378|Q9BZ76-2|CNTNAP3	118.74307786436346	0.02196067127630568	3				NaN	NaN	0	NaN	7834	5780	13615
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13620	40.753	NaN	1173.9	30	0	196.94	0.214	+			5477	AVAAFVLYK	9	55	491.29256717302076	980.5705814128415	2	491.2918701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVAAFVLYK_	CCDC107|p.A74V|1|0.5|ENSG00000159884|chr9:35658690-35658690|C/T|missense_variant;ENSG00000159884|ENST00000426546|CCDC107;nc|ENSG00000159884|Q8WV48-2|CCDC107;nc|ENSG00000159884|Q8WV48-3|CCDC107;nc|ENSG00000159884|Q8WV48-4|CCDC107;nc|ENSG00000159884|Q8WV48-5|CCDC107	74.25504064058377	0.12238981753128622	3				NaN	NaN	0	NaN	7835	5783	13619
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13621	40.756	NaN	1825.5	30	0	385.74	0.036	+			25971	LSIQWPGKR	9	61	542.8164205070728	1083.6182880809456	2	542.8157348632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSIQWPGKR_	ENSG00000123119|ENST00000417640|NECAB1	40.77816245573522	0.41113185337114944	3				NaN	NaN	0	NaN	7836	5783	13619
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13628	40.786	NaN	1823.4	30	0	107.02	0.214			+	43649	TISAQNLSIV	10	61	523.2980346679688	NaN	0	523.2980346679688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TISAQNLSIV_	REV__BIRC6|p.K3585Sfs*8|1|0.32|ENSG00000115760|chr2:32515171-32515171|A/-|frameshift_variant;REV__BIRC6|p.S3504Mfs*5|1|0.15|ENSG00000115760|chr2:32513095-32513098|TAGT/-|frameshift_variant;REV__ENSG00000115760|ENST00000421745|BIRC6	53.08895987439943	0.2860736266326207	3				NaN	NaN	0	NaN	7837	5789	13627
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13629	40.79	NaN	1325.2	30	0	112.43	0.106			+	29750	PHRPLGLL	8	49	451.78122328163704	NaN	0	451.7807312011719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PHRPLGLL_	REV__PHF23|p.D230Ifs*37|1|0.2|ENSG00000040633|chr17:7236239-7236239|C/-|frameshift_variant	35.200714571348534	1.7418937515398478	3				NaN	NaN	0	NaN	7838	5789	13627
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13630	40.792	NaN	1645.8	30	0	81.764	0.039			+	-1	MHTKQHINLQ	10	69	633.3225708007812	NaN	0	633.3225708007812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))HTKQHINLQ_	REV__ENSG00000197619|ENST00000598071|ZNF615;REV__nc|ENSG00000197619|Q8N8J6-3|ZNF615;REV__nc|ENSG00000197619|Q8N8J6|ZNF615	31.529811441608018	0.39664753963064203	3				NaN	NaN	0	NaN	7839	5789	13627
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13634	40.806	NaN	1657	30	0	162.06	0.214			+	6923	CMMGGPMVHG	10	55	518.199283818007	1034.3840147028138	2	518.2000122070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_CMM(Oxidation (M))GGPMVHG_	REV__DIP2B|p.A1021Cfs*11|1|0.32|ENSG00000066084|chr12:50721279-50721280|-/CTGTATGCAC|frameshift_variant;REV__DIP2B|p.I979Afs*17|1|0.13|ENSG00000066084|chr12:50718790-50718815|AAATAGAAGAGAATGATTTGGTGAGG/-|frameshift_variant;REV__DIP2B|p.V1240Dfs*9|1|0.05|ENSG00000066084|chr12:50731445-50731446|-/ATATTTAC|frameshift_variant;REV__DIP2B|p.V893Gfs*91|1|0.06|ENSG00000066084|chr12:50714417-50714418|-/G|frameshift_variant;REV__ENSG00000066084|ENST00000301180|DIP2B	54.76467175910256	0.41345489472286195	3				NaN	NaN	0	NaN	7840	5792	13633
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13635	40.81	NaN	1873.2	30	0	195.89	0.035	+			49671	VYISNGQVL	9	53	496.77454365459505	991.5345343759901	2	496.7754211425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYISNGQVL_	ENSG00000113811|ENST00000495461|SELENOK;ENST00000487571.1_1_3:53922418-53925815:-|nuORF	74.25504064058377	0.12238981753128622	3				NaN	NaN	0	NaN	7841	5792	13633
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13643	40.932	NaN	1404.4	30	0	225.89	0.143	+			5282	ATVIFIVTK	9	59	496.31319187221584	990.6118308112317	2	496.3135070800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATVIFIVTK_	ENSG00000171234|ENST00000305231|UGT2B7	80.45461616416974	0.09558281504443908	3				NaN	NaN	0	NaN	7843	5798	13642
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13647	40.948	NaN	506.54	30	0	82.092	0.214			+	1480	AFLWHLRP	8	25	347.1987952593938	NaN	0	347.1988220214844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AFLWHLRP_	REV__ENSG00000089060|ENST00000680972|SLC8B1;REV__nc|ENSG00000089060|Q6J4K2-2|SLC8B1	12.206847966760668	1.7418937515398478	3				NaN	NaN	0	NaN	7844	5801	13646
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13648	40.951	NaN	1515.8	30	0	202.87	0.106			+	11804	FSSATYRAL	9	57	508.2644391868874	1014.5143254405748	2	508.26348876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FSSATYRAL_	REV__ENST00000340926.7_1_7:872152-889323:+|nuORF;REV__ENST00000413171.6_1_7:872152-892516:+|nuORF;REV__nc|ENSG00000164828|O94901-3|SUN1;REV__nc|ENSG00000164828|O94901-9|SUN1	42.86426827375447	0.38666266728046506	3				NaN	NaN	0	NaN	7845	5801	13646
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13649	40.953	NaN	666.18	30	0	94.496	0.106	+			24273	LEVLVKTL	8	38	457.79944842562526	NaN	0	457.799560546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LEVLVKTL_	BAG6|p.A35Pfs*3|1|0.35|ENSG00000204463|chr6:31651661-31651661|C/-|frameshift_variant;ENSG00000204463|ENST00000676615|BAG6;nc|ENSG00000204463|P46379-2|BAG6;nc|ENSG00000204463|P46379-4|BAG6;nc|ENSG00000204463|P46379-5|BAG6;nc|ENSG00000204463|P46379|BAG6	47.657333605630114	1.7418937515398478	3				NaN	NaN	0	NaN	7846	5801	13646
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13650	40.955	NaN	975.11	30	0	199.13	0.106	+			49960	WAAAGPARR	9	48	478.2666296123378	954.5187062914756	2	478.2666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_WAAAGPARR_	CD63|p.A47Lfs*37|1|0.14|ENSG00000135404|chr12:55727267-55727267|C/-|frameshift_variant;ENST00000552692.5_1_12:56120939-56121008:-|nuORF	35.200714571348534	0.47427825964483533	3				NaN	NaN	0	NaN	7847	5801	13646
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13651	40.957	NaN	2220.5	30	0	195.51	0.106			+	-1	RTGMLTVLY	9	66	535.288207730088	1068.5618625269758	2	535.2879028320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_RTGM(Oxidation (M))LTVLY_	REV__OR9A2|p.N41Tfs*6|1|0.09|ENSG00000179468|chr7:143027011-143027011|T/-|frameshift_variant	42.396135135203025	0.392153681582562	3				NaN	NaN	0	NaN	7848	5801	13646
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13652	40.959	NaN	2232.1	30	0	121.2	0.045				-1	LWQKRWCERYQ	11	64	551.6112845853148	NaN	0	551.612060546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_LWQKRWC(Carbamidomethyl (C))ERYQ_	ENST00000526535.1_1_11:111234037-111249995:-|nuORF	3.61906645146314	0.456735970842152	3				NaN	NaN	0	NaN	7849	5801	13646
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13656	40.973	NaN	1321.1	30	0	132.79	0.214	+			51167	YPDRIMNTF	9	67	578.7767225391177	1155.5388921450353	2	578.7764892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YPDRIMNTF_	ENSG00000137267|ENST00000333628|TUBB2A;ENSG00000137285|ENST00000259818|TUBB2B;ENSG00000188229|ENST00000340384|TUBB4B;ENSG00000196230|ENST00000327892|TUBB;ENSG00000258947|ENST00000315491|TUBB3;ENST00000518096.1_1_8:30209523-30210210:+|nuORF;ENST00000604929.1_1_9:140136931-140138005:+|nuORF;nc|ENSG00000258947|Q13509-2|TUBB3;TUBB2B|p.D177Hfs*21|1|0.32|ENSG00000137285|chr6:3225559-3225560|TC/-|frameshift_variant;TUBB2B|p.S168N|1|0.15|ENSG00000137285|chr6:3225586-3225586|C/T|missense_variant	51.19269402634007	0.2889735674168909	3				NaN	NaN	0	NaN	7850	5804	13655
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13657	40.977	NaN	1197.1	30	0	124.94	0.034	+			3721	ATAAVIFLH	9	49	471.77484130859375	NaN	0	471.77484130859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATAAVIFLH_	ENSG00000120992|ENST00000316963|LYPLA1;ENST00000517297.5_1_8:54967680-55014407:-|nuORF;ENST00000519926.5_1_8:54966225-55014407:-|nuORF;ENST00000521856.1_1_8:55013466-55014395:-|nuORF;nc|ENSG00000120992|O75608-2|LYPLA1	60.29395666154354	0.1480651883005104	3				NaN	NaN	0	NaN	7851	5804	13655
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13663	40.993	NaN	1654.1	30	0	235.69	0.143	+			4160	ATFFGEVVK	9	49	499.2717868628384	996.5290207924768	2	499.2712097167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATFFGEVVK_	ENSG00000183527|ENST00000331573|PSMG1;nc|ENSG00000183527|O95456-2|PSMG1;PSMG1|p.T194Hfs*13|1|0.12|ENSG00000183527|chr21:39178524-39178524|T/-|frameshift_variant	45.97224482568171	0.3502073465782774	3				NaN	NaN	0	NaN	7854	5807	13662
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13667	41.009	NaN	1895.2	30	0	236.1	0.143	+			42159	SYSQSSNLF	9	56	516.7354983552551	1031.4564437773101	2	516.735595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SYSQSSNLF_	ENSG00000172466|ENST00000261332|ZNF24;ENST00000589881.5_1_18:32917198-32917747:-|nuORF	63.53385203322761	0.18415635464017938	3				NaN	NaN	0	NaN	7855	5810	13666
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13686	41.106	NaN	1701.9	30	0	128.54	0.145	+			40953	SVFVETFVQK	10	62	592.3219727190278	1182.6293925048556	2	592.3216552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVFVETFVQK_	ENSG00000170786|ENST00000303749|SDR16C5;nc|ENSG00000170786|Q8N3Y7-2|SDR16C5	74.1650062923329	0.2432923583094885	3				NaN	NaN	0	NaN	7856	5828	13685
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13690	41.123	NaN	768.79	30	0	36.761	0.139			+	12267	GAVPPLSP	8	40	369.2124085937647	736.4102642543294	2	369.2121276855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GAVPPLSP_	REV__ENST00000514480.1_2_4:76439745-76440060:+|nuORF	39.021493756699265	0.6623843612266921	3				NaN	NaN	0	NaN	7857	5831	13689
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13700	41.171	NaN	1573.4	30	0	139.74	0.143	+			36026	SEILQANQL	9	59	508.27507337263955	NaN	0	508.27655029296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEILQANQL_	ENSG00000036054|ENST00000394144|TBC1D23;ENST00000486274.5_1_3:99980342-100042509:+|nuORF;nc|ENSG00000036054|Q9NUY8-2|TBC1D23;TBC1D23|p.A351Ifs*23|1|0.05|ENSG00000036054|chr3:100299289-100299290|-/ATTCACA|frameshift_variant	47.95952297671804	0.22075498469600283	3				NaN	NaN	0	NaN	7858	5840	13699
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13705	41.188	NaN	1838.3	30	0	256.69	0.144	+			7315	DASLKTYLY	9	57	537.280051942351	1072.5455509515018	2	537.2798461914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DASLKTYLY_	ENSG00000186952|ENST00000455884|TMEM232;ENST00000515518.6_1_5:109760554-109978041:-|nuORF;nc|ENSG00000186952|C9JQI7-2|TMEM232;TMEM232|p.N394Ifs*13|3|0.32|ENSG00000186952|chr5:110605204-110605204|T/-|frameshift_variant	42.86426827375447	0.38666266728046506	3				NaN	NaN	0	NaN	7860	5843	13704
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13712	41.22	NaN	3697.4	30	0	644.24	0.145				-1	CVEVKYHKN	9	65	588.7947982426076	1175.5750435520151	2	588.7955322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_C(Carbamidomethyl (C))VEVKYHKN_	SI|p.R1019C|1|0.3|ENSG00000090402|chr3:165023614-165023614|G/A|missense_variant	38.80614096846853	0.43426287593479557	3				NaN	NaN	0	NaN	7861	5849	13711
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13724	41.271	NaN	874.37	30	0	78.695	0.142				-1	IKQGMSMR	8	45	483.7479621229896	NaN	0	483.7472229003906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_IKQGMSM(Oxidation (M))R_	ENSG00000141027|ENST00000268712|NCOR1;nc|ENSG00000141027|O75376-2|NCOR1;NCOR1|p.P1637Qfs*19|1|0.14|ENSG00000141027|chr17:16065526-16065526|G/-|frameshift_variant	30.503639358989545	1.7418937515398478	3				NaN	NaN	0	NaN	7864	5858	13723
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13729	41.287	NaN	1773.1	30	0	356.55	0.214				-1	 	0	43	373.0452203994905	372.0379439328905	1	373.0447692871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7866	5861	13728
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13730	41.291	NaN	639.94	30	0	71.989	0.106	+			23658	LARVCPQRP	9	40	347.1987154855839	NaN	0	347.1986389160156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LARVCPQRP_	ENST00000418663.5_1_7:76178841-76179072:+|nuORF;ENST00000423084.1_1_7:76178841-76180825:+|nuORF	17.364965105453717	0.37820932774828947	3				NaN	NaN	0	NaN	7867	5861	13728
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13731	41.293	NaN	1756.2	30	0	200.35	0.106	+			38560	SSFGGLILSK	10	65	504.7899877639946	1007.5654225947892	2	504.7893371582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSFGGLILSK_	ENSG00000114544|ENST00000360370|SLC41A3;ENST00000506102.5_1_3:125725861-125741959:-|nuORF;ENST00000512557.5_1_3:125725252-125741959:-|nuORF;nc|ENSG00000114544|Q96GZ6-2|SLC41A3;nc|ENSG00000114544|Q96GZ6-3|SLC41A3;nc|ENSG00000114544|Q96GZ6-4|SLC41A3;nc|ENSG00000114544|Q96GZ6-5|SLC41A3;nc|ENSG00000114544|Q96GZ6-6|SLC41A3;nc|ENSG00000114544|Q96GZ6-7|SLC41A3;nc|ENSG00000114544|Q96GZ6-8|SLC41A3;nc|ENSG00000114544|Q96GZ6|SLC41A3	48.601550744091256	0.46988609897316763	3				NaN	NaN	0	NaN	7868	5861	13728
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13732	41.294	NaN	1090.3	30	0	103.84	0.106			+	33708	RPFAVWIL	8	54	501.3016662597656	NaN	0	501.3016662597656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RPFAVWIL_	REV__ENST00000471073.1_1_22:21354171-21355180:-|nuORF	46.76643321282427	1.7418937515398478	3				NaN	NaN	0	NaN	7869	5861	13728
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13733	41.296	NaN	804.58	30	0	78.008	0.106	+			5308	ATVLFGIAR	9	49	474.2862773664591	NaN	0	474.2860412597656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATVLFGIAR_	ABCC4|p.L883Wfs*7|2|0.22|ENSG00000125257|chr13:95083178-95083178|A/-|frameshift_variant;ENSG00000125257|ENST00000645237|ABCC4;nc|ENSG00000125257|O15439-2|ABCC4;nc|ENSG00000125257|O15439-3|ABCC4;nc|ENSG00000125257|O15439-4|ABCC4	42.396135135203025	0.2590952873412954	3				NaN	NaN	0	NaN	7870	5861	13728
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13734	41.298	NaN	1116.6	30	0	56.508	0.036	+			9357	EISFSKSLY	9	57	537.2803955078125	NaN	0	537.2803955078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EISFSKSLY_	ITGAE|p.N1096S|1|0.2|ENSG00000083457|chr17:3720353-3720353|T/C|missense_variant	27.882242232435846	0.3367954786602879	3				NaN	NaN	0	NaN	7871	5861	13728
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13739	41.312	NaN	1536.9	30	0	285.33	0.214	+			29281	NYIGAISI	8	49	425.7373708185984	849.4601887039968	2	425.7362365722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NYIGAISI_	tr|U7SS22|U7SS22_FUSNUVirB4familytypeIVsecretion/conjugaltransferATPaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01513PE=3SV=1	37.15910966729921	0.6739408393984688	3				NaN	NaN	0	NaN	7873	5864	13738
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13740	41.316	NaN	1086.8	30	0	97.77	0.035	+			13068	GFGRRIFVG	9	54	504.7899877639946	1007.5654225947892	2	505.29193115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GFGRRIFVG_	ENST00000469214.2_1_1:193029275-193029332:+|nuORF	31.954861631926434	0.5046124803899898	3				NaN	NaN	0	NaN	7874	5864	13738
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13752	41.362	NaN	1613.8	30	0	193.74	0.142	+			28378	NELILKTL	8	55	472.2949976061684	942.5754422791368	2	472.2947082519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NELILKTL_	ENSG00000143179|ENST00000367879|UCK2	85.16082228582465	0.29211966821764696	3				NaN	NaN	0	NaN	7877	5873	13751
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13756	41.379	NaN	1460.9	30	0	126.2	0.142			+	46751	VGSLHDRGK	9	55	484.7677001953125	NaN	0	484.7677001953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VGSLHDRGK_	REV__ENSG00000141219|ENST00000535032|C17orf80;REV__nc|ENSG00000141219|Q9BSJ5-2|MTNAP1;REV__nc|ENSG00000141219|Q9BSJ5-3|MTNAP1	39.252832667884924	0.27938773122138094	3				NaN	NaN	0	NaN	7878	5876	13755
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13769	41.449	NaN	2457.9	30	0	417.33	0.214	+			41250	SVLGQLGITK	10	54	508.3110053658695	1014.607457798539	2	508.3109436035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVLGQLGITK_	ENSG00000197249|ENST00000393087|SERPINA1;ENST00000489769.1_1_14:94844788-94846995:-|nuORF;nc|ENSG00000197249|P01009-2|SERPINA1;SERPINA1|p.L377*|1|0.19|ENSG00000197249|chr14:94378576-94378576|A/-|frameshift_variant;SERPINA1|p.T369Rfs*3|1|0.05|ENSG00000197249|chr14:94378605-94378606|-/CCCC|frameshift_variant	80.870553263523	0.18850861740459154	3				NaN	NaN	0	NaN	7879	5888	13768
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13770	41.452	NaN	1258.2	30	0	317.34	0.035	+			10406	EVFMRNIV	8	50	512.2686858354291	1022.5228187376582	2	512.2683715820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_EVFM(Oxidation (M))RNIV_	tr|U7SPP7|U7SPP7_FUSNUMethylaspartatemutaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01855PE=4SV=1	40.5726180659479	0.6527593143185008	3				NaN	NaN	0	NaN	7880	5888	13768
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13774	41.467	NaN	989.29	30	0	325.38	0.143	+			11605	FPSSVTNTL	9	37	483.2508811853818	964.4872094375636	2	483.2506408691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FPSSVTNTL_	ENSG00000145113|ENST00000463781|MUC4;MUC4|p.L3985Ffs*274|1|0.3|ENSG00000145113|chr3:195779627-195779627|G/-|frameshift_variant;MUC4|p.N4902Tfs*8|1|0.37|ENSG00000145113|chr3:195761027-195761027|T/-|frameshift_variant;nc|ENSG00000145113|Q99102-10|MUC4;nc|ENSG00000145113|Q99102-11|MUC4;nc|ENSG00000145113|Q99102-15|MUC4;nc|ENSG00000145113|Q99102-16|MUC4;nc|ENSG00000145113|Q99102-17|MUC4;nc|ENSG00000145113|Q99102-2|MUC4;nc|ENSG00000145113|Q99102-3|MUC4;nc|ENSG00000145113|Q99102-5|MUC4;nc|ENSG00000145113|Q99102-7|MUC4;nc|ENSG00000145113|Q99102-8|MUC4;nc|ENSG00000145113|Q99102-9|MUC4	32.75053402867276	0.49717649897795874	3				NaN	NaN	0	NaN	7881	5891	13773
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13778	41.484	NaN	1828.1	30	0	233.35	0.214			+	46978	VKLIIQPI	8	54	462.31794750263816	922.6213420720763	2	462.3179016113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VKLIIQPI_	REV__ENST00000440835.6_1_12:71032743-71032788:-|nuORF	35.200714571348534	0.6875396545722289	3				NaN	NaN	0	NaN	7882	5894	13777
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13779	41.488	NaN	1722.6	30	0	175.21	0.036	+			28805	NPIDHVSFY	9	60	546.2607699546835	NaN	0	546.2616577148438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NPIDHVSFY_	ENSG00000101347|ENST00000646673|SAMHD1;nc|ENSG00000101347|Q9Y3Z3-3|SAMHD1	49.44154591367651	0.21054156626303966	3				NaN	NaN	0	NaN	7883	5894	13777
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13786	41.52	NaN	1204.3	30	0	107.89	0.143	+			15341	GTVLFEIAK	9	50	489.2868035858921	NaN	0	489.2869567871094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTVLFEIAK_	ENSG00000175970|ENST00000344651|UNC119B	36.446750945000026	0.29355505452396785	3				NaN	NaN	0	NaN	7884	5900	13785
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13790	41.537	NaN	1062.7	30	0	44.381	0.143	+			658	AEAESMYQI	9	58	521.233154296875	NaN	0	521.233154296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEAESMYQI_	CON__H-INV:HIT000292931;CON__P05787;CON__Q9H552;ENSG00000170421|ENST00000692008|KRT8;ENST00000409686.2_1_9:102067468-102068890:+|nuORF;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;ENST00000547031.5_1_12:53292389-53294972:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	39.252832667884924	0.27938773122138094	3				NaN	NaN	0	NaN	7885	5903	13789
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13802	41.586	NaN	717.55	30	0	51.146	0.142			+	7429	DEVIPDQL	8	36	464.73406982421875	NaN	0	464.73406982421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DEVIPDQL_	REV__ENST00000476321.5_1_1:110279982-110280760:-|nuORF	24.20275056022122	1.7418937515398478	3				NaN	NaN	0	NaN	7888	5912	13801
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13815	41.653	NaN	1494.3	30	0	148.63	0.144			+	-1	CSGKDLHLY	9	62	546.760883395687	1091.5072138581738	2	546.762939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_C(Carbamidomethyl (C))SGKDLHLY_	REV__ENSG00000283654|ENST00000637218|CIROP;REV__nc|ENSG00000283654|A0A1B0GTW7-2|CIROP;REV__nc|ENSG00000283654|A0A1B0GTW7-3|CIROP	35.61828744233558	0.47037581924408073	3				NaN	NaN	0	NaN	7889	5924	13814
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13820	41.67	NaN	373.81	30	0	50.705	0.139	+			29978	PPAPVVGG	8	30	347.1983215928218	NaN	0	347.1980285644531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PPAPVVGG_	ENST00000535177.1_1_11:61120996-61124198:-|nuORF;ENST00000540139.5_3_11:61120480-61121493:-|nuORF	16.704963439144045	1.7418937515398478	3				NaN	NaN	0	NaN	7891	5927	13819
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13852	41.836	NaN	1246.2	30	0	70.538	0.143	+			49699	VYKVVGNLL	9	56	502.8107677664946	1003.6069825997893	2	502.8099060058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYKVVGNLL_	ENSG00000183856|ENST00000361170|IQGAP3;IQGAP3|p.Q1205Sfs*31|1|0.4|ENSG00000183856|chr1:156534628-156534628|G/-|frameshift_variant	63.30626980617807	0.18605348971131092	3				NaN	NaN	0	NaN	7893	5957	13851
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13862	41.885	NaN	2108.7	30	0	516.59	0.145			+	11108	FFLAPLHDY	9	62	561.7830418770722	NaN	0	561.7833251953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FFLAPLHDY_	REV__ENSG00000186952|ENST00000455884|TMEM232;REV__ENST00000515518.6_1_5:109760554-109978041:-|nuORF;REV__nc|ENSG00000186952|C9JQI7-2|TMEM232;REV__TMEM232|p.A141V|1|0.21|ENSG00000186952|chr5:110638277-110638277|G/A|missense_variant;REV__TMEM232|p.N394Ifs*13|3|0.32|ENSG00000186952|chr5:110605204-110605204|T/-|frameshift_variant	50.0245360154114	0.20652386741182333	3				NaN	NaN	0	NaN	7894	5966	13861
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13867	41.902	NaN	715.39	30	0	41.13	0.139			+	27351	MIMKVRQTV	9	38	369.2117493283244	NaN	0	369.21221923828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MIMKVRQTV_	REV__ENSG00000113161|ENST00000287936|HMGCR;REV__ENST00000504466.1_1_5:74645886-74647190:+|nuORF;REV__nc|ENSG00000113161|P04035-2|HMGCR;REV__nc|ENSG00000113161|P04035-3|HMGCR	22.579656572578934	0.3605601358598771	3				NaN	NaN	0	NaN	7896	5969	13866
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13881	41.966	NaN	795.71	30	0	55.042	0.143			+	49412	VVVAAIIGSI	10	47	471.30440468271576	NaN	0	471.30462646484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVVAAIIGSI_	REV__ENSG00000154721|ENST00000480456|JAM2;REV__ENST00000492962.1_1_21:27074502-27081762:+|nuORF;REV__nc|ENSG00000154721|P57087-2|JAM2;REV__nc|ENSG00000154721|P57087-3|JAM2	30.503639358989545	0.4000169810673414	3				NaN	NaN	0	NaN	7898	5981	13880
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13888	41.999	NaN	1281.2	30	0	103.42	0.143	+			35199	SAIVEIFSK	9	56	497.28464438858333	992.5547358439667	2	497.28436279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAIVEIFSK_	ENSG00000050405|ENST00000341247|LIMA1;LIMA1|p.T536Lfs*38|2|0.4|ENSG00000050405|chr12:50177739-50177739|G/-|frameshift_variant;nc|ENSG00000050405|Q9UHB6-4|LIMA1	40.05817265558897	0.419577045485086	3				NaN	NaN	0	NaN	7899	5987	13887
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13892	42.014	NaN	1538.8	30	0	420.83	0.214	+			1101	AELGNMQGL	9	49	466.72871812636004	931.4428833195201	2	466.7283020019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AELGNMQGL_	CON__P05787;CON__Q9H552;ENSG00000170421|ENST00000692008|KRT8;ENST00000405771.3_1_6:134619244-134619385:-|nuORF;ENST00000409686.2_1_9:102067468-102068890:+|nuORF;ENST00000414328.2_1_1:157043381-157043870:+|nuORF;ENST00000441609.1_1_6:162989483-162989972:+|nuORF;ENST00000450021.1_1_2:183936291-183936849:-|nuORF;ENST00000550170.5_1_12:53294858-53298765:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	67.49366992349736	0.1516260258713357	3				NaN	NaN	0	NaN	7900	5990	13891
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13893	42.018	NaN	1822.9	30	0	195.29	0.106	+			14933	GTMEWIMIK	9	63	562.7772688416655	1123.539984750131	2	562.7772827148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_GTM(Oxidation (M))EWIMIK_	ENSG00000168273|ENST00000477703|UQCC5	64.20726635412375	0.17854274437659667	3				NaN	NaN	0	NaN	7901	5990	13891
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13894	42.02	NaN	662.74	30	0	43.537	0.032			+	13176	GHRLKGGG	8	36	391.2248127922611	NaN	0	391.2245788574219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GHRLKGGG_	REV__ENST00000416860.2_2_1:2486170-2486278:-|nuORF	26.79610172149135	1.7418937515398478	3				NaN	NaN	0	NaN	7902	5990	13891
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13911	42.097	NaN	784.72	30	0	71.292	0.138				-1	 	0	32	322.6262053773886	643.2378578215772	2	322.6261901855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7904	6005	13910
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13918	42.13	NaN	734.31	30	0	84.534	0.138				-1	 	0	31	322.6262053773886	643.2378578215772	2	322.626220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7905	6011	13917
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13934	42.211	NaN	1804.5	30	0	115.6	0.144	+			6573	AYLEAIHNF	9	56	539.2730287324556	1076.531504531711	2	539.2725830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AYLEAIHNF_	ENSG00000042753|ENST00000263270|AP2S1	49.44154591367651	0.3095138337212152	3				NaN	NaN	0	NaN	7906	6026	13933
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13938	42.228	NaN	1090.8	30	0	101.37	0.144	+			6574	AYLEAIHNF	9	51	539.2730287324556	1076.531504531711	2	539.7726440429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AYLEAIHNF_	ENSG00000042753|ENST00000263270|AP2S1	45.9519527083369	0.35044536499095585	3				NaN	NaN	0	NaN	7907	6029	13937
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13942	42.244	NaN	1248.6	30	0	217.76	0.142				-1	VTMFSTLR	8	48	485.7531179803034	NaN	0	485.3209533691406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_VTM(Oxidation (M))FSTLR_	ENSG00000137266|ENST00000406686|SLC22A23;nc|ENSG00000137266|A1A5C7-4|SLC22A23;SLC22A23|p.E648Sfs*36|1|0.22|ENSG00000137266|chr6:3273174-3273174|C/-|frameshift_variant	45.9519527083369	1.7418937515398478	3				NaN	NaN	0	NaN	7908	6032	13941
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13946	42.261	NaN	1779.2	30	0	135.73	0.143	+			46569	VFLENVIR	8	61	495.2920484417215	NaN	0	495.2919616699219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VFLENVIR_	ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2	62.107414245175825	1.7418937515398478	3				NaN	NaN	0	NaN	7909	6035	13945
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13956	42.31	NaN	2971.2	30	0	262.22	0.143	+			41103	SVINVFVGR	9	61	495.79108158590054	989.5676102386011	2	495.79034423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVINVFVGR_	ENSG00000135540|ENST00000343505|NHSL1;nc|ENSG00000135540|Q5SYE7|NHSL1;NHSL1|p.E1312Gfs*27|1|0.12|ENSG00000135540|chr6:138430422-138430423|-/C|frameshift_variant;NHSL1|p.I1199Ffs*26|1|0.44|ENSG00000135540|chr6:138430763-138430763|G/-|frameshift_variant;NHSL1|p.P932Rfs*70|1|0.13|ENSG00000135540|chr6:138431562-138431562|G/-|frameshift_variant	90.60085204095205	0.06317133949006545	3				NaN	NaN	0	NaN	7910	6044	13955
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13968	42.359	NaN	1248.8	30	0	158.35	0.143	+			38655	SSILPAGFKP	10	45	508.79287239100586	1015.5711918488117	2	509.2935485839844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSILPAGFKP_	G2E3|p.P643L|1|0.23|ENSG00000092140|chr14:30616341-30616341|C/T|missense_variant	40.77816245573522	0.5419747034533848	3				NaN	NaN	0	NaN	7913	6053	13967
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13979	42.408	NaN	1754.6	30	0	168.5	0.214			+	27928	MVCSINQHR	9	61	544.260872180012	1086.507191426824	2	544.2598266601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MVCSINQHR_	REV__ENST00000261497.8_1_17:20905954-20906125:-|nuORF	27.882242232435846	0.5426732730940306	3				NaN	NaN	0	NaN	7915	6062	13978
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13980	42.412	NaN	751.97	30	0	98.32	0.034	+			2080	ALCYHFLT	8	43	484.2395324707031	NaN	0	484.2395324707031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ALCYHFLT_	ENSG00000128951|ENST00000331200|DUT	31.57888975003103	1.7418937515398478	3				NaN	NaN	0	NaN	7916	6062	13978
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13985	42.426	NaN	983.47	30	0	57.138	0.144	+			46599	VFRIPGCRF	9	57	547.7983729239564	NaN	0	547.7982177734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VFRIPGCRF_	DHX16|p.R575C|1|0.38|ENSG00000204560|chr6:30660064-30660064|G/A|missense_variant	38.80614096846853	0.28164298475537564	3				NaN	NaN	0	NaN	7918	6065	13984
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13992	42.459	NaN	1331.2	30	0	74.779	0.214			+	18236	INSSLKKSTA	10	59	524.805064642241	1047.5955763512818	2	524.8065185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_INSSLKKSTA_	REV__ENSG00000123352|ENST00000552918|SPATS2	54.722347961057174	0.4138398245444204	3				NaN	NaN	0	NaN	7919	6071	13991
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13993	42.462	NaN	1065	30	0	98.764	0.034	+			42125	SYLQAANAL	9	53	475.7513779556329	NaN	0	475.75146484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SYLQAANAL_	COL6A3|p.A2956Lfs*45|1|0.33|ENSG00000163359|chr2:237336234-237336234|C/-|frameshift_variant;COL6A3|p.A2957Lfs*44|1|0.33|ENSG00000163359|chr2:237336232-237336232|A/-|frameshift_variant;COL6A3|p.G1770Vfs*12|1|0.05|ENSG00000163359|chr2:237366878-237366879|-/TGGTGTAA|frameshift_variant;COL6A3|p.G2207Efs*35|1|0.22|ENSG00000163359|chr2:237354908-237354908|G/-|frameshift_variant;COL6A3|p.G3016Vfs*19|1|0.34|ENSG00000163359|chr2:237334810-237334810|G/-|frameshift_variant;COL6A3|p.P2319Qfs*12|1|0.06|ENSG00000163359|chr2:237348359-237348359|G/-|frameshift_variant;COL6A3|p.R768H|1|0.3|ENSG00000163359|chr2:237378830-237378830|C/T|missense_variant;COL6A3|p.V1771Sfs*8|3|0.08|ENSG00000163359|chr2:237366876-237366876|C/-|frameshift_variant;ENSG00000163359|ENST00000295550|COL6A3;nc|ENSG00000163359|P12111-2|COL6A3;nc|ENSG00000163359|P12111-3|COL6A3;nc|ENSG00000163359|P12111-5|COL6A3	75.04331003522576	0.0883683072398826	3				NaN	NaN	0	NaN	7920	6071	13991
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13998	42.477	NaN	836.56	30	0	44.508	0.14			+	18152	ILNRLGPNFQ	10	43	391.22489908875497	NaN	0	391.225830078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ILNRLGPNFQ_	REV__BAIAP2L1|p.A287Lfs*11|2|0.27|ENSG00000006453|chr7:98310542-98310542|G/-|frameshift_variant;REV__BAIAP2L1|p.F462Lfs*34|1|0.21|ENSG00000006453|chr7:98304232-98304232|A/-|frameshift_variant;REV__BAIAP2L1|p.N36Ifs*6|1|0.24|ENSG00000006453|chr7:98362382-98362382|C/-|frameshift_variant;REV__BAIAP2L1|p.P436Hfs*60|4|0.39|ENSG00000006453|chr7:98304311-98304311|G/-|frameshift_variant;REV__ENSG00000006453|ENST00000005260|BAIAP2L1;REV__ENST00000462558.5_1_7:97937677-98030347:-|nuORF	21.68575002086885	0.4201028297492154	3				NaN	NaN	0	NaN	7922	6074	13997
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14002	42.494	NaN	1781.2	30	0	164.62	0.143	+			41580	SVQGFFLNH	9	62	524.7647796023734	1047.5150062715468	2	524.76611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVQGFFLNH_	ENSG00000180011|ENST00000322342|PTGR3;nc|ENSG00000180011|Q8N4Q0-2|PTGR3	62.107414245175825	0.1960472003779324	3				NaN	NaN	0	NaN	7923	6077	14001
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14013	42.542	NaN	1923.2	30	0	307.65	0.142				-1	 	0	43	472.26491038537756	942.5152678375551	2	472.2637634277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7925	6086	14012
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14017	42.559	NaN	1508.5	30	0	70.194	0.214				-1	 	0	54	369.21253777680687	736.4105226204138	2	369.2120056152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7926	6089	14016
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14018	42.562	NaN	895.77	30	0	106.43	0.032			+	30067	PQGYAATI	8	33	410.7145698130646	819.4145866929292	2	410.7137145996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PQGYAATI_	REV__ENSG00000084710|ENST00000403714|EFR3B;REV__nc|ENSG00000084710|Q9Y2G0-2|EFR3B	24.20275056022122	0.7724576178584145	3				NaN	NaN	0	NaN	7927	6089	14016
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14028	42.609	NaN	1737.7	30	0	173.38	0.144	+			51496	YVLVAMNEF	9	62	543.2713773850812	NaN	0	543.2711791992188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YVLVAMNEF_	ENSG00000065361|ENST00000267101|ERBB3;ENST00000546884.1_1_12:56474084-56480451:+|nuORF;ERBB3|p.A805Gfs*22|1|0.1|ENSG00000065361|chr12:56097177-56097178|-/G|frameshift_variant;ERBB3|p.A805Hfs*95|1|0.33|ENSG00000065361|chr12:56097178-56097178|G/-|frameshift_variant;ERBB3|p.R1080Vfs*22|1|0.14|ENSG00000065361|chr12:56101093-56101093|C/-|frameshift_variant;nc|ENSG00000065361|P21860-2|ERBB3;nc|ENSG00000065361|P21860-3|ERBB3;nc|ENSG00000065361|P21860-4|ERBB3	55.50420428727701	0.16876052142120426	3				NaN	NaN	0	NaN	7928	6098	14027
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14033	42.626	NaN	1456.2	30	0	142.79	0.214	+			26832	LVTLDNLIL	9	55	507.3135279482876	1012.6125029633752	2	507.3132019042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LVTLDNLIL_	ENSG00000262628|ENST00000575751|OR1D5;nc|ENSG00000262628|P47884|OR1D4	44.377184641726394	0.36891676396732553	3				NaN	NaN	0	NaN	7930	6101	14032
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14034	42.63	NaN	1846.8	30	0	465.85	0.034			+	24366	LFPSLELR	8	53	487.7880280001734	973.5615030671469	2	487.78729248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LFPSLELR_	REV__ENST00000328405.6_1_3:19189957-19190221:+|nuORF	31.954861631926434	0.7126016770032289	3				NaN	NaN	0	NaN	7931	6101	14032
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14042	42.66	NaN	1733.4	30	0	146.11	0.145	+			29341	NYTNGSFGSNF	11	71	604.2552091905808	NaN	0	604.2555541992188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NYTNGSFGSNF_	DDX5|p.D572Nfs*6|1|0.04|ENSG00000108654|chr17:64500054-64500055|-/TGACAAGATAGTT|frameshift_variant;ENSG00000108654|ENST00000225792|DDX5;ENST00000581230.5_1_17:62496043-62497015:-|nuORF;nc|ENSG00000108654|P17844-2|DDX5	109.82975700811294	0.017541071656143718	3				NaN	NaN	0	NaN	7933	6107	14041
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14046	42.676	NaN	1413.1	30	0	416.85	0.143				-1	SLVAARGSCI	10	54	509.7718574973465	NaN	0	509.77178955078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SLVAARGSCI_	ENSG00000133216|ENST00000374630|EPHB2;EPHB2|p.A228T|1|0.24|ENSG00000133216|chr1:22784947-22784947|G/A|missense_variant;nc|ENSG00000133216|P29323-3|EPHB2;nc|ENSG00000133216|P29323|EPHB2	43.650786325866115	0.3457431322078509	3				NaN	NaN	0	NaN	7934	6110	14045
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14063	42.757	NaN	1803	30	0	211.35	0.144	+			47399	VPLPAHLRY	9	55	533.3145451706359	1064.6145374080718	2	533.3145751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VPLPAHLRY_	ENSG00000183307|ENST00000331437|TMEM121B;nc|ENSG00000183307|Q9BXQ6-2|TMEM121B	47.657333605630114	0.33044192980041115	3				NaN	NaN	0	NaN	7936	6125	14062
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14089	42.885	NaN	1612.1	30	0	351.23	0.214	+			2151	ALLGVIIAK	9	45	449.31044736094555	NaN	0	449.3103942871094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ALLGVIIAK_	ENSG00000113249|ENST00000523175|HAVCR1	60.29395666154354	0.1480651883005104	3				NaN	NaN	0	NaN	7938	6149	14088
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14090	42.888	NaN	2207.5	30	0	428.93	0.039	+			32039	QRRREFKDR	9	62	645.8572498420393	NaN	0	645.8569946289062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QRRREFKDR_	ENSG00000188158|ENST00000676302|NHS;nc|ENSG00000188158|Q6T4R5-2|NHS;nc|ENSG00000188158|Q6T4R5-3|NHS;nc|ENSG00000188158|Q6T4R5-4|NHS;NHS|p.P977Hfs*71|1|0.12|ENSG00000188158|chrX:17727096-17727096|C/-|frameshift_variant	21.9598887501803	0.3626577482100488	3				NaN	NaN	0	NaN	7939	6149	14088
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14094	42.903	NaN	1687	30	0	197.09	0.214				-1	 	0	54	487.8061803643019	973.5978077954038	2	487.8055419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7940	6152	14093
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14095	42.906	NaN	1082.8	30	0	60.453	0.106				-1	 	0	44	369.21253777680687	736.4105226204138	2	369.2118835449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7941	6152	14093
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14096	42.908	NaN	851.64	30	0	70.266	0.035			+	5343	ATVSGGCVDIL	11	49	517.7626842617611	1033.5108155903222	2	517.763427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATVSGGCVDIL_	REV__ENSG00000138759|ENST00000512123|FRAS1;REV__nc|ENSG00000138759|Q86XX4|FRAS1	35.15202426646627	0.6210751305041943	3				NaN	NaN	0	NaN	7942	6152	14093
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14101	42.922	NaN	2053.2	30	0	502.33	0.214			+	27080	MAIGIYVVAS	10	56	512.2817433601075	1022.548933787015	2	512.2811279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MAIGIYVVAS_	REV__tr|U7STD6|U7STD6_FUSNUSodium/glutamatesymporterOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01373PE=3SV=1	55.50420428727701	0.4067289358710215	3				NaN	NaN	0	NaN	7944	6155	14100
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14102	42.926	NaN	843.31	30	0	119.56	0.034	+			27868	MTIDKNTK	8	35	475.7509650221459	949.4873771110919	2	475.7510986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MTIDKNTK_	chr10:128113602-128116491|398|11.56|0.71|4.03|-|ENST00000368653|MKI67,MKI67;ENSG00000148773|ENST00000368654|MKI67;MKI67|p.I2584V|1|0.06|ENSG00000148773|chr10:128104090-128104090|T/C|missense_variant;MKI67|p.R3036Yfs*27|1|0.04|ENSG00000148773|chr10:128102735-128102736|-/AAAATAA|frameshift_variant;nc|ENSG00000148773|P46013-2|MKI67	39.252832667884924	0.6609488554722044	3				NaN	NaN	0	NaN	7945	6155	14100
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14115	42.987	NaN	1093.5	30	0	72.909	0.143			+	7350	DCLYKQLL	8	48	498.2655334472656	NaN	0	498.2655334472656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DCLYKQLL_	REV__ENSG00000114867|ENST00000346169|EIF4G1;REV__ENST00000442406.5_1_3:184038690-184052693:+|nuORF;REV__ENST00000460829.5_1_3:184046782-184052693:+|nuORF;REV__nc|ENSG00000114867|Q04637-3|EIF4G1;REV__nc|ENSG00000114867|Q04637-4|EIF4G1;REV__nc|ENSG00000114867|Q04637-5|EIF4G1;REV__nc|ENSG00000114867|Q04637-6|EIF4G1;REV__nc|ENSG00000114867|Q04637-7|EIF4G1;REV__nc|ENSG00000114867|Q04637-8|EIF4G1;REV__nc|ENSG00000114867|Q04637-9|EIF4G1	45.9519527083369	1.7418937515398478	3				NaN	NaN	0	NaN	7946	6167	14114
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14122	43.02	NaN	1664.7	30	0	114.98	0.214	+			2532	AQAALQAQQPR	11	66	591.3244565032289	NaN	0	591.3239135742188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AQAALQAQQPR_	nc|ENSG00000106290|P49848-2|TAF6	42.86426827375447	0.36657022113551535	3				NaN	NaN	0	NaN	7947	6173	14121
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14123	43.023	NaN	1003.8	30	0	143.02	0.034			+	2061	ALALNFIY	8	46	462.76320863362986	NaN	0	462.7633361816406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ALALNFIY_	REV__ENSG00000082556|ENST00000265572|OPRK1;REV__ENSG00000112038|ENST00000330432|OPRM1;REV__ENSG00000116329|ENST00000234961|OPRD1;REV__ENSG00000125510|ENST00000336866|OPRL1;REV__nc|ENSG00000082556|P41145-2|OPRK1;REV__nc|ENSG00000112038|P35372-10|OPRM1;REV__nc|ENSG00000112038|P35372-11|OPRM1;REV__nc|ENSG00000112038|P35372-12|OPRM1;REV__nc|ENSG00000112038|P35372-13|OPRM1;REV__nc|ENSG00000112038|P35372-14|OPRM1;REV__nc|ENSG00000112038|P35372-15|OPRM1;REV__nc|ENSG00000112038|P35372-2|OPRM1;REV__nc|ENSG00000112038|P35372-3|OPRM1;REV__nc|ENSG00000112038|P35372-4|OPRM1;REV__nc|ENSG00000112038|P35372-5|OPRM1;REV__nc|ENSG00000112038|P35372-6|OPRM1;REV__nc|ENSG00000112038|P35372-7|OPRM1;REV__nc|ENSG00000112038|P35372-8|OPRM1;REV__nc|ENSG00000112038|P35372-9|OPRM1;REV__nc|ENSG00000125510|P41146-2|OPRL1;REV__OPRK1|p.S301Nfs*23|1|0.05|ENSG00000082556|chr8:53229537-53229538|GC/-|frameshift_variant	37.028477286268924	1.7418937515398478	3				NaN	NaN	0	NaN	7948	6173	14121
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14162	43.209	NaN	1991.2	30	0	239.86	0.144	+			6039	AVMGAYVLLK	10	60	532.8135910600673	1063.6126291869346	2	533.3154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVMGAYVLLK_	ENSG00000166562|ENST00000587834|SEC11C;ENST00000591406.1_1_18:56822908-56825914:+|nuORF	71.29570347882199	0.26673431503403816	3				NaN	NaN	0	NaN	7951	6209	14161
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14175	43.272	NaN	716.61	30	0	71.365	0.139			+	30049	PPVPVAAS	8	40	369.2119039477767	NaN	0	369.2116394042969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PPVPVAAS_	REV__ENSG00000166783|ENST00000396368|MARF1;REV__ENST00000552771.5_1_16:15690552-15694435:-|nuORF;REV__nc|ENSG00000166783|Q9Y4F3-3|MARF1;REV__nc|ENSG00000166783|Q9Y4F3-4|MARF1;REV__nc|ENSG00000166783|Q9Y4F3-5|MARF1	29.841539824830324	1.7418937515398478	3				NaN	NaN	0	NaN	7952	6221	14174
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14189	43.335	NaN	803.8	30	0	69.839	0.14				-1	 	0	43	391.22565983123854	780.4367667292771	2	391.22503662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7954	6233	14188
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14199	43.382	NaN	2331.1	30	0	419.26	0.144	+			254	AAMLDTVVFK	10	52	547.7994864300163	1093.5844199268324	2	547.8016357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAMLDTVVFK_	ENSG00000115233|ENST00000409682|PSMD14;ENST00000477232.5_1_2:162241962-162267908:+|nuORF;ENST00000492908.1_1_2:162265323-162267908:+|nuORF	65.46538089061403	0.31613324008013116	3				NaN	NaN	0	NaN	7955	6242	14198
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14223	43.496	NaN	1518.8	30	0	366.43	0.145	+			11296	FKMFAVFCAL	10	50	588.8006068756558	NaN	0	588.8013916015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FKMFAVFCAL_	ENSG00000112541|ENST00000539869|PDE10A;nc|ENSG00000112541|Q9Y233-1|PDE10A;nc|ENSG00000112541|Q9Y233-2|PDE10A	29.14955571784316	0.4044631218331212	3				NaN	NaN	0	NaN	7958	6263	14222
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14227	43.512	NaN	1731	30	0	274.87	0.214	+			39226	STAIQELFK	9	59	518.788107706976	1035.561662480752	2	518.7877807617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STAIQELFK_	ENSG00000104833|ENST00000264071|TUBB4A;ENSG00000137267|ENST00000333628|TUBB2A;ENSG00000137285|ENST00000259818|TUBB2B;ENSG00000176014|ENST00000317702|TUBB6;ENSG00000188229|ENST00000340384|TUBB4B;ENSG00000196230|ENST00000327892|TUBB;ENSG00000258947|ENST00000315491|TUBB3;ENST00000417736.2_1_18:12308439-12326126:+|nuORF;ENST00000518096.1_1_8:30210219-30210855:+|nuORF;ENST00000604929.1_1_9:140136931-140138005:+|nuORF;nc|ENSG00000258947|Q13509-2|TUBB3	45.02220120713402	0.3613509778819777	3				NaN	NaN	0	NaN	7959	6266	14226
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14228	43.516	NaN	1431.6	30	0	211.86	0.034	+			14283	GSVLLFVTK	9	53	482.2974834659517	NaN	0	482.29876708984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSVLLFVTK_	ENSG00000198231|ENST00000389924|DDX42;ENST00000578593.1_1_17:61889231-61895755:+|nuORF;nc|ENSG00000198231|Q86XP3-2|DDX42	70.8162118820467	0.10318768208603292	3				NaN	NaN	0	NaN	7960	6266	14226
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14250	43.627	NaN	721.13	30	0	152.53	0.214				-1	ASMKKVKSL	9	26	336.53442314136805	NaN	0	336.5345764160156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ASM(Oxidation (M))KKVKSL_	ENST00000369426.9_1_1:119575536-119588262:-|nuORF	19.1035232394073	0.3723251548669699	3				NaN	NaN	0	NaN	7961	6287	14249
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14251	43.63	NaN	687.36	30	0	39.078	0.032			+	43546	THGPKKSVRVE	11	40	413.2380065917969	NaN	0	413.2380065917969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_THGPKKSVRVE_	REV__ENSG00000163607|ENST00000383678|GTPBP8;REV__GTPBP8|p.T206Nfs*10|1|0.36|ENSG00000163607|chr3:112996935-112996936|-/A|frameshift_variant	17.833141474888023	0.456735970842152	3				NaN	NaN	0	NaN	7962	6287	14249
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14267	43.708	NaN	1142.1	30	0	101.02	0.14				-1	 	0	46	391.22569440461126	780.4368358760225	2	391.2251892089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7963	6302	14266
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14280	43.772	NaN	686.49	30	0	67.997	0.139				-1	VCLCMEFE	8	35	344.14030204849723	NaN	0	344.14031982421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_VCLC(Carbamidomethyl (C))MEFE_	ENST00000528066.1_1_1:211485798-211486333:+|nuORF;nc|ENSG00000117625|Q9P2K3-4|RCOR3	18.324413293986947	1.7418937515398478	3				NaN	NaN	0	NaN	7964	6314	14279
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14284	43.789	NaN	1329.1	30	0	610.39	0.214			+	27575	MPGGGGPP	8	30	335.1543827321024	668.2942125310049	2	335.1540222167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MPGGGGPP_	REV__ENSG00000175048|ENST00000359775|ZDHHC14;REV__nc|ENSG00000175048|Q8IZN3-2|ZDHHC14;REV__ZDHHC14|p.Y146Tfs*17|1|0.38|ENSG00000175048|chr6:157593011-157593011|G/-|frameshift_variant	10.184766708764876	0.7843118145031319	3				NaN	NaN	0	NaN	7965	6317	14283
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14285	43.793	NaN	1050.6	30	0	747.75	0.03				-1	 	0	27	324.69365635968114	NaN	0	324.6937561035156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7966	6317	14283
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14289	43.807	NaN	667.51	30	0	58.267	0.138			+	-1	CNGFVRML	8	35	338.16260817052483	NaN	0	338.16259765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_C(Carbamidomethyl (C))NGFVRM(Oxidation (M))L_	REV__SNX31|p.R49M|1|0.2|ENSG00000174226|chr8:100636007-100636007|C/A|missense_variant	21.9598887501803	1.7418937515398478	3				NaN	NaN	0	NaN	7967	6320	14288
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14294	43.823	NaN	400.81	30	0	57.954	0.139			+	13673	GPCGGPSGG	9	23	344.6404113769531	NaN	0	344.6404113769531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GPCGGPSGG_	REV__ENSG00000072736|ENST00000346183|NFATC3;REV__ENST00000379165.8_1_16:68119584-68225707:+|nuORF;REV__ENST00000553077.5_1_16:68118971-68225707:+|nuORF;REV__ENST00000563288.5_1_16:68120670-68248329:+|nuORF;REV__ENST00000563319.5_1_16:68118971-68248329:+|nuORF;REV__ENST00000569766.5_1_16:68118971-68260371:+|nuORF;REV__nc|ENSG00000072736|Q12968-2|NFATC3;REV__nc|ENSG00000072736|Q12968-3|NFATC3;REV__nc|ENSG00000072736|Q12968-4|NFATC3;REV__nc|ENSG00000072736|Q12968-5|NFATC3;REV__nc|ENSG00000072736|Q12968-6|NFATC3;REV__NFATC3|p.L634Sfs*2|1|0.27|ENSG00000072736|chr16:68174493-68174494|-/T|frameshift_variant	12.206847966760668	0.39566704307768535	3				NaN	NaN	0	NaN	7969	6323	14293
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14304	43.871	NaN	1060.1	30	0	77.203	0.144	+			3859	ATAMLQSLLK	10	54	538.3138741916677	1074.6131954501352	2	538.3130493164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATAMLQSLLK_	ENSG00000196586|ENST00000369977|MYO6;nc|ENSG00000196586|Q9UM54-2|MYO6;nc|ENSG00000196586|Q9UM54-4|MYO6;nc|ENSG00000196586|Q9UM54-5|MYO6;nc|ENSG00000196586|Q9UM54-6|MYO6;nc|ENSG00000196586|Q9UM54|MYO6	27.047317107675042	0.6589519614906109	3				NaN	NaN	0	NaN	7970	6332	14303
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14308	43.888	NaN	519.76	30	0	42.286	0.214			+	2078	ALCFRVSPL	9	39	503.28125	NaN	0	503.28125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ALCFRVSPL_	REV__ENST00000442114.6_2_6:43971589-43971727:+|nuORF	24.20275056022122	0.35506675290109213	3				NaN	NaN	0	NaN	7971	6335	14307
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14309	43.891	NaN	575.15	30	0	59.822	0.036	+			9678	ELVLKSAVEA	10	48	529.8094482421875	NaN	0	529.8094482421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ELVLKSAVEA_	ENSG00000163902|ENST00000296255|RPN1	21.0322348234405	0.4201028297492154	3				NaN	NaN	0	NaN	7972	6335	14307
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14341	44.049	NaN	970.41	30	0	79.853	0.214				-1	 	0	42	391.22569440461126	780.4368358760225	2	391.2250671386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7974	6365	14340
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14342	44.053	NaN	1073.9	30	0	88.924	0.035	+			46190	VDWLTEKM	8	51	511.2552496730569	1020.4959464129138	2	511.25469970703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VDWLTEKM_	ENSG00000141543|ENST00000649764|EIF4A3;ENSG00000156976|ENST00000323963|EIF4A2;ENSG00000161960|ENST00000293831|EIF4A1;ENST00000429589.5_1_3:186502413-186505273:+|nuORF;ENST00000468362.5_1_3:186503755-186505556:+|nuORF;ENST00000475653.5_1_3:186502413-186505086:+|nuORF;ENST00000492144.5_1_3:186503809-186505672:+|nuORF;ENST00000497177.1_1_3:186504924-186505672:+|nuORF;ENST00000575978.1_1_17:78111144-78112096:-|nuORF;ENST00000578324.5_1_17:7477602-7481249:+|nuORF;ENST00000581544.5_1_17:7477924-7481249:+|nuORF;ENST00000581621.1_1_17:7476159-7481249:+|nuORF;nc|ENSG00000156976|Q14240-2|EIF4A2;nc|ENSG00000161960|P60842-2|EIF4A1	40.77816245573522	0.6514838689002179	3				NaN	NaN	0	NaN	7975	6365	14340
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14368	44.179	NaN	2691	30	0	250.22	0.143				-1	 	0	52	495.80380168834165	989.5930504434833	2	495.8033142089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7977	6389	14367
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14397	44.321	NaN	1201.6	30	0	197	0.141			+	11961	FVLGPELGG	9	43	444.7449010331377	NaN	0	444.7447509765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FVLGPELGG_	REV__ENSG00000132518|ENST00000254854|GUCY2D	47.91560031466742	0.22105767942158736	3				NaN	NaN	0	NaN	7979	6416	14396
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14404	44.352	NaN	1013.4	30	0	82.121	0.143	+			10740	FAEGFVRAL	9	50	505.27755500884695	NaN	0	505.2778015136719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FAEGFVRAL_	ENSG00000177606|ENST00000371222|JUN;JUN|p.R257Kfs*53|1|0.31|ENSG00000177606|chr1:58782301-58782302|-/T|frameshift_variant	77.31757898189308	0.08057531075035683	3				NaN	NaN	0	NaN	7980	6422	14403
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14414	44.399	NaN	766.79	30	0	57.916	0.14				-1	 	0	45	391.22569440461126	780.4368358760225	2	391.2251892089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7981	6431	14413
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14421	44.43	NaN	1840.1	30	0	170.34	0.145				-1	PNCLYGLNLT	10	55	582.7905218259446	1163.566490718689	2	582.7901000976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_PNC(Carbamidomethyl (C))LYGLNLT_	ENSG00000169783|ENST00000355300|LINGO1;nc|ENSG00000169783|Q96FE5-2|LINGO1	39.252832667884924	0.5560298534376815	3				NaN	NaN	0	NaN	7982	6437	14420
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14470	44.681	NaN	727.6	30	0	53.569	0.143			+	47903	VSLLVFLNV	9	38	502.3127136230469	NaN	0	502.3127136230469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSLLVFLNV_	REV__ENSG00000135063|ENST00000303068|ENTREP1;REV__nc|ENSG00000135063|Q15884|ENTREP1	37.81151784470057	0.28666463014928195	3				NaN	NaN	0	NaN	7983	6485	14469
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14474	44.698	NaN	870.27	30	0	51.701	0.14			+	18174	ILTEPGPV	8	43	413.23880093996064	824.4630489467213	2	413.2383728027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ILTEPGPV_	REV__ENSG00000080603|ENST00000262518|SRCAP;REV__nc|ENSG00000080603|Q6ZRS2-2|SRCAP;REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP;REV__SRCAP|p.L2975*|1|0.31|ENSG00000080603|chr16:30738960-30738960|C/-|frameshift_variant	15.63621529709179	0.7929342111279789	3				NaN	NaN	0	NaN	7984	6488	14473
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14482	44.729	NaN	2367.7	30	0	590.19	0.214	+			4367	ATGSWDSFLK	10	64	556.2753176892617	1110.5360824453232	2	556.2752075195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATGSWDSFLK_	ENSG00000078369|ENST00000378609|GNB1;ENSG00000111664|ENST00000229264|GNB3;ENSG00000172354|ENST00000303210|GNB2;nc|ENSG00000111664|P16520-2|GNB3;nc|ENSG00000172354|P62879-2|GNB2	86.18897241530135	0.15289278403033058	3				NaN	NaN	0	NaN	7986	6494	14481
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14483	44.733	NaN	478.32	30	0	42.044	0.031			+	12195	GAPLLAAP	8	30	355.2144692024655	NaN	0	355.2148132324219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GAPLLAAP_	REV__ENST00000447098.6_1_1:45291946-45292617:-|nuORF	16.704963439144045	1.7418937515398478	3				NaN	NaN	0	NaN	7987	6494	14481
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14520	44.917	NaN	1343	30	0	676.2	0.139			+	29976	PPAPLGKG	8	38	368.719816055141	NaN	0	368.7198486328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PPAPLGKG_	REV__ENSG00000163635|ENST00000674280|ATXN7;REV__ENST00000474112.5_1_3:63898274-63982174:+|nuORF;REV__nc|ENSG00000163635|O15265-2|ATXN7;REV__nc|ENSG00000163635|O15265-3|ATXN7	14.664097394203935	1.7418937515398478	3				NaN	NaN	0	NaN	7988	6530	14519
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14539	45.011	NaN	1669.1	30	0	241.99	0.143				-1	 	0	48	504.3112074856693	1006.6078620381386	2	504.3104553222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7989	6548	14538
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14556	45.089	NaN	963.51	30	0	58.795	0.14	+			29986	PPEVSALI	8	45	413.2382877662445	NaN	0	413.23809814453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PPEVSALI_	ENSG00000241973|ENST00000255882|PI4KA;ENST00000484220.1_1_22:21119034-21147510:-|nuORF;PI4KA|p.E1291Kfs*2|1|0.43|ENSG00000241973|chr22:20734425-20734425|G/-|frameshift_variant;PI4KA|p.H1295Pfs*13|1|0.28|ENSG00000241973|chr22:20734411-20734412|-/G|frameshift_variant;PI4KA|p.H1295Tfs*36|2|0.31|ENSG00000241973|chr22:20734412-20734412|G/-|frameshift_variant	21.70233525837049	1.7418937515398478	3				NaN	NaN	0	NaN	7991	6563	14555
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14560	45.106	NaN	1234.7	30	0	283.22	0.138				-1	 	0	42	338.19384375885284	674.3731345845057	2	338.193603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7992	6566	14559
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14594	45.277	NaN	1206.3	30	0	995.78	0.139				-1	 	0	20	346.70718547585074	691.3998180185015	2	346.7068786621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7993	6599	14593
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14604	45.312	NaN	798.77	30	0	64.322	0.139			+	29944	PMQPGPVLHC	10	38	360.17584927519425	NaN	0	360.17529296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PMQPGPVLHC_	REV__HERV1_I-int_dup2|chr3:34679996-34686397:+|1.0948245018220069|0.0565463038051543|4.28|448.0|361|3|anti-sense	24.519189625965996	0.41966695327750003	3				NaN	NaN	0	NaN	7997	6605	14603
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14611	45.344	NaN	722.26	30	0	73.723	0.139			+	12254	GATPPTGP	8	31	349.1781652694514	NaN	0	349.1784973144531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GATPPTGP_	REV__ENSG00000174948|ENST00000389740|GPR149;REV__GPR149|p.I582Nfs*6|1|0.33|ENSG00000174948|chr3:154338150-154338151|-/T|frameshift_variant	33.51558372728122	1.7418937515398478	3				NaN	NaN	0	NaN	7998	6611	14610
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14647	45.517	NaN	1983.6	30	0	1520.3	0.138	+			28577	NKILLHLE	8	22	327.2014159939079	NaN	0	327.2015075683594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NKILLHLE_	ENSG00000177483|ENST00000316997|RBM44;RBM44|p.I38Nfs*44|1|0.32|ENSG00000177483|chr2:237821162-237821163|-/A|frameshift_variant;RBM44|p.N125Mfs*4|1|0.07|ENSG00000177483|chr2:237823503-237823503|A/-|frameshift_variant;RBM44|p.Y233Kfs*26|1|0.06|ENSG00000177483|chr2:237827498-237827499|-/AAATTTGAAAATGAAGCTCAAAAAAATAA|frameshift_variant	11.511019455917149	1.7418937515398478	3				NaN	NaN	0	NaN	8001	6644	14646
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14652	45.533	NaN	503.8	30	0	52.075	0.139			+	43551	THLDVSSLF	9	30	340.17837815660556	NaN	0	340.1778564453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_THLDVSSLF_	REV__ENSG00000124356|ENST00000394070|STAMBP;REV__ENSG00000138134|ENST00000371926|STAMBPL1;REV__ENST00000486458.1_1_2:74077502-74087672:+|nuORF;REV__nc|ENSG00000138134|Q96FJ0-2|STAMBPL1;REV__STAMBPL1|p.K405Rfs*21|3|0.43|ENSG00000138134|chr10:88922389-88922389|A/-|frameshift_variant	19.996771675451527	0.3693019437812985	3				NaN	NaN	0	NaN	8003	6647	14651
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14656	45.549	NaN	806.52	30	0	49.16	0.214	+			30377	PVPELLTG	8	46	413.23828135508484	NaN	0	413.23883056640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PVPELLTG_	ENSG00000166987|ENST00000355673|MBD6;MBD6|p.G877Afs*69|1|0.53|ENSG00000166987|chr12:57528367-57528367|G/-|frameshift_variant;MBD6|p.P931Lfs*15|1|0.41|ENSG00000166987|chr12:57528528-57528528|C/-|frameshift_variant;MBD6|p.R878Pfs*26|1|0.34|ENSG00000166987|chr12:57528369-57528406|GGCCGAAAGCCTGGCAGCCGGCGGGAGCCTGGCCGACT/-|frameshift_variant	21.70233525837049	1.7418937515398478	3				NaN	NaN	0	NaN	8004	6650	14655
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14657	45.553	NaN	527.69	30	0	90.202	0.03	+			44023	TPLILPPTT	9	22	318.1961040245553	NaN	0	318.19586181640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TPLILPPTT_	ENSG00000162722|ENST00000366481|TRIM58	17.364965105453717	0.37820932774828947	3				NaN	NaN	0	NaN	8005	6650	14655
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14679	45.661	NaN	1342.9	30	0	181.46	0.143	+			41302	SVLNLVIVK	9	49	492.8265912729479	NaN	0	492.8263244628906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVLNLVIVK_	ENSG00000137154|ENST00000380394|RPS6;ENST00000464444.1_1_19:13005132-13005321:+|nuORF	52.936696900407355	0.1864545979552969	3				NaN	NaN	0	NaN	8006	6671	14678
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14696	45.741	NaN	1080.7	30	0	108.36	0.144			+	49586	VYFTRSTTV	9	49	537.2855224609375	NaN	0	537.2855224609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYFTRSTTV_	REV__ENSG00000107679|ENST00000368990|PLEKHA1;REV__ENST00000481451.1_1_10:124183684-124184496:+|nuORF;REV__nc|ENSG00000107679|Q9HB21-2|PLEKHA1	23.04248740728303	0.3589936788096251	3				NaN	NaN	0	NaN	8008	6686	14695
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14714	45.821	NaN	1786	30	0	277.57	0.144			+	6850	CKKPTNADTI	10	55	545.7822761678457	1089.5499994024913	2	545.7827758789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CKKPTNADTI_	REV__nc|ENSG00000148737|Q9NQB0-3|TCF7L2	41.42661286455405	0.5359995577334734	3				NaN	NaN	0	NaN	8011	6701	14713
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14718	45.837	NaN	684.18	30	0	57.742	0.142	+			47103	VLLLPMPM	8	35	457.2644922961528	NaN	0	457.26416015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VLLLPMPM_	ENSG00000186881|ENST00000334726|OR13F1	16.704963439144045	1.7418937515398478	3				NaN	NaN	0	NaN	8012	6704	14717
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14729	45.886	NaN	1054.1	30	0	77.796	0.141	+			33515	RKQAVGPGG	9	59	435.25136294944605	NaN	0	435.25091552734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RKQAVGPGG_	ENSG00000104960|ENST00000391842|PTOV1;ENST00000596424.1_1_19:50360315-50362048:+|nuORF;nc|ENSG00000104960|Q86YD1-2|PTOV1;nc|ENSG00000104960|Q86YD1-3|PTOV1	38.80614096846853	0.28164298475537564	3				NaN	NaN	0	NaN	8014	6713	14728
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14773	46.104	NaN	1719.8	30	0	300.92	0.143	+			29292	NYISGIQTI	9	44	504.7721986438809	1007.5298443545619	2	505.2735290527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NYISGIQTI_	ENSG00000189091|ENST00000302516|SF3B3;nc|ENSG00000189091|Q15393-3|SF3B3	63.53385203322761	0.18415635464017938	3				NaN	NaN	0	NaN	8016	6755	14772
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14823	46.354	NaN	871.55	30	0	67.556	0.141	+			47284	VNAQPGRK	8	38	435.25136294944605	NaN	0	435.2513732910156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VNAQPGRK_	ENST00000215061.8_1_19:17337016-17337903:+|nuORF	19.359975847455235	1.7418937515398478	3				NaN	NaN	0	NaN	8018	6803	14822
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14857	46.523	NaN	1190.4	30	0	93.164	0.143			+	25695	LRKNISQF	8	53	503.2948913574219	NaN	0	503.2948913574219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LRKNISQF_	REV__ENSG00000183495|ENST00000389561|EP400;REV__EP400|p.P2793Rfs*46|1|0.3|ENSG00000183495|chr12:132064707-132064707|C/-|frameshift_variant;REV__nc|ENSG00000183495|Q96L91-3|EP400;REV__nc|ENSG00000183495|Q96L91-4|EP400;REV__nc|ENSG00000183495|Q96L91-5|EP400;REV__nc|ENSG00000183495|Q96L91|EP400	53.351449002276354	1.7418937515398478	3				NaN	NaN	0	NaN	8019	6836	14856
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14861	46.54	NaN	621.2	30	0	54.013	0.139	+			42041	SWLIIQRY	8	34	360.2067838217844	NaN	0	360.2065124511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SWLIIQRY_	AOC1|p.R197H|1|0.23|ENSG00000002726|chr7:150857060-150857060|G/A|missense_variant;ENSG00000002726|ENST00000360937|AOC1;nc|ENSG00000002726|P19801-2|AOC1	17.364965105453717	1.7418937515398478	3				NaN	NaN	0	NaN	8020	6839	14860
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14893	46.696	NaN	3234	30	0	2519.3	0.139				-1	 	0	38	368.72009962096234	735.4256463087247	2	368.71966552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	8022	6869	14892
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14906	46.759	NaN	1254.2	30	0	163.42	0.143	+			4306	ATGILGAVFK	10	43	488.7953005838277	975.5760482344555	2	488.7947692871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATGILGAVFK_	ENSG00000127324|ENST00000247829|TSPAN8;ENST00000552128.2_1_12:71519116-71532942:-|nuORF	45.97224482568171	0.49411383603842696	3				NaN	NaN	0	NaN	8023	6881	14905
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14925	46.854	NaN	836.41	30	0	41.448	0.214			+	32788	RASKLHAS	8	46	435.2514951022157	NaN	0	435.2513427734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RASKLHAS_	REV__ENST00000370673.7_2_1:84815590-84815692:+|nuORF	25.450171626174864	1.7418937515398478	3				NaN	NaN	0	NaN	8024	6899	14924
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14926	46.858	NaN	581.96	30	0	40.419	0.034			+	30053	PPVVLYRN	8	37	479.27770496911705	NaN	0	479.2773132324219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PPVVLYRN_	REV__ENSG00000181544|ENST00000650831|FANCB;REV__FANCB|p.I419Lfs*7|1|0.08|ENSG00000181544|chrX:14853110-14853111|-/TATTTAAATTGGAATATTAG|frameshift_variant;REV__FANCB|p.I419Tfs*9|1|0.08|ENSG00000181544|chrX:14853109-14853110|-/AG|frameshift_variant	20.481830146152948	1.741893751539848	3				NaN	NaN	0	NaN	8025	6899	14924
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14941	46.921	NaN	4072.2	30	0	3421.6	0.139				-1	 	0	30	348.72258567397466	695.4306184147493	2	348.72235107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	8028	6911	14940
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14946	46.937	NaN	505.91	30	0	76.702	0.138				-1	 	0	30	340.2093265096736	678.4041000861472	2	340.2092590332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	8030	6914	14945
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14968	47.048	NaN	1134	30	0	66.485	0.142	+			47420	VPQRSQKA	8	52	457.26452560455203	912.5144982759041	2	457.2645568847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VPQRSQKA_	ENSG00000147853|ENST00000381809|AK3;nc|ENSG00000147853|Q9UIJ7-2|AK3;nc|ENSG00000147853|Q9UIJ7-3|AK3	20.481830146152948	0.8005983782650069	3				NaN	NaN	0	NaN	8031	6935	14967
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15035	47.39	NaN	1014.6	30	0	68.951	0.142			+	29989	PPFVPIML	8	52	457.2645210819373	912.5144892306746	2	457.2651672363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PPFVPIML_	REV__ENSG00000134532|ENST00000451604|SOX5;REV__ENST00000535530.5_1_12:23716331-23887638:-|nuORF;REV__ENST00000536911.1_1_12:23757311-23887638:-|nuORF;REV__nc|ENSG00000134532|P35711-2|SOX5;REV__nc|ENSG00000134532|P35711-4|SOX5;REV__nc|ENSG00000134532|P35711-5|SOX5;REV__SOX5|p.K639Sfs*77|1|0.78|ENSG00000134532|chr12:23536525-23536525|T/-|frameshift_variant	33.49298260027079	0.7007254697536482	3				NaN	NaN	0	NaN	8032	7001	15034
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15082	47.624	NaN	1070.7	30	0	150.29	0.143			+	23542	LAKGTKDKE	9	47	495.2831115722656	NaN	0	495.2831115722656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LAKGTKDKE_	REV__ADGB|p.S76Afs*20|1|0.49|ENSG00000118492|chr6:146635522-146635522|A/-|frameshift_variant	27.882242232435846	0.3367954786602879	3				NaN	NaN	0	NaN	8034	7046	15081
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15107	47.749	NaN	1009.3	30	0	62.751	0.142	+			30400	PVSPRRTT	8	40	457.2645210819373	912.5144892306746	2	457.2646789550781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PVSPRRTT_	ENSG00000158321|ENST00000342771|AUTS2;nc|ENSG00000158321|Q8WXX7-2|AUTS2;nc|ENSG00000158321|Q8WXX7-5|AUTS2	33.51558372728122	0.7005509609380386	3				NaN	NaN	0	NaN	8035	7070	15106
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15148	47.951	NaN	715.5	30	0	77.494	0.144				-1	ELCIVMCLK	9	34	554.7794799804688	NaN	0	554.7794799804688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_ELC(Carbamidomethyl (C))IVMCLK_	ENSG00000005810|ENST00000544440|MYCBP2;MYCBP2|p.P4047Qfs*26|2|0.35|ENSG00000005810|chr13:77067782-77067782|G/-|frameshift_variant;MYCBP2|p.T4311Pfs*37|1|0.14|ENSG00000005810|chr13:77059619-77059619|G/-|frameshift_variant;MYCBP2|p.V3749*|1|0.12|ENSG00000005810|chr13:77081486-77081486|C/-|frameshift_variant;nc|ENSG00000005810|O75592-2|MYCBP2	37.15910966729921	0.2899585034171616	3				NaN	NaN	0	NaN	8037	7109	15147
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15162	48.014	NaN	958.11	30	0	42.667	0.142	+			24137	LEKVQRAN	8	47	479.27777356319893	956.5409941931979	2	479.2783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LEKVQRAN_	ADCYAP1R1|p.I38V|1|0.09|ENSG00000078549|chr7:31064891-31064891|A/G|missense_variant	29.14955571784316	0.7342621283720113	3				NaN	NaN	0	NaN	8039	7121	15161
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15166	48.03	NaN	745.99	30	0	59.165	0.143			+	13179	GHVTVVVKY	9	46	501.29092701109636	NaN	0	501.2912902832031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GHVTVVVKY_	REV__ENSG00000150787|ENST00000280362|PTS	23.04248740728303	0.3589936788096251	3				NaN	NaN	0	NaN	8040	7124	15165
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15170	48.046	NaN	2177	30	0	1528.3	0.14			+	13130	GGLPVPQL	8	36	390.73317187713695	779.4517908210739	2	390.7323913574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GGLPVPQL_	REV__ENSG00000180357|ENST00000326648|ZNF609;REV__nc|ENSG00000180357|O15014-2|ZNF609;REV__ZNF609|p.A221Qfs*22|1|0.39|ENSG00000180357|chr15:64500077-64500077|G/-|frameshift_variant;REV__ZNF609|p.G412Afs*39|1|0.22|ENSG00000180357|chr15:64674086-64674086|G/-|frameshift_variant;REV__ZNF609|p.K734Rfs*12|2|0.43|ENSG00000180357|chr15:64675048-64675048|A/-|frameshift_variant;REV__ZNF609|p.L475Ffs*6|1|0.24|ENSG00000180357|chr15:64674273-64674273|C/-|frameshift_variant;REV__ZNF609|p.P665Hfs*23|1|0.09|ENSG00000180357|chr15:64674843-64674843|C/-|frameshift_variant;REV__ZNF609|p.P882Lfs*30|1|0.33|ENSG00000180357|chr15:64675495-64675495|C/-|frameshift_variant;REV__ZNF609|p.R194Q|1|0.34|ENSG00000180357|chr15:64500000-64500000|G/A|missense_variant;REV__ZNF609|p.V569Ffs*4|1|0.24|ENSG00000180357|chr15:64674551-64674551|C/-|frameshift_variant	10.184766708764876	0.7843118145031319	3				NaN	NaN	0	NaN	8041	7127	15169
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15210	48.235	NaN	2845.6	30	0	2219.4	0.14				-1	 	0	38	370.7357532961389	739.4569536590778	2	370.7355041503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	8045	7163	15209
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15214	48.25	NaN	1429.5	30	0	559.97	0.139				-1	 	0	28	356.2542592467999	710.4939655603998	2	356.25439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	8046	7166	15213
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15221	48.283	NaN	550.56	30	0	45.993	0.139	+			47020	VLALPPGG	8	37	362.22249975574294	NaN	0	362.22222900390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VLALPPGG_	ENST00000306085.10_3_7:100728844-100730655:+|nuORF	16.704963439144045	1.7418937515398478	3				NaN	NaN	0	NaN	8047	7172	15220
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15237	48.362	NaN	1221.7	30	0	77.944	0.142			+	32469	QVLVAARSGG	10	53	479.27777356319893	956.5409941931979	2	479.2777099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QVLVAARSGG_	REV__ENSG00000204394|ENST00000375663|VARS1;REV__VARS|p.A620Pfs*25|1|0.23|ENSG00000204394|chr6:31782750-31782750|C/-|frameshift_variant;REV__VARS|p.L801Wfs*10|1|0.3|ENSG00000204394|chr6:31781707-31781707|A/-|frameshift_variant	26.69291269510374	0.6618461711292317	3				NaN	NaN	0	NaN	8048	7187	15236
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15306	48.706	NaN	1111.3	30	0	100.47	0.142			+	37231	SKQLRAPSA	9	52	479.2774891151061	956.5404252970122	2	479.2774658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SKQLRAPSA_	REV__ENSG00000065328|ENST00000378714|MCM10;REV__MCM10|p.E240Kfs*26|1|0.13|ENSG00000065328|chr10:13175629-13175629|G/-|frameshift_variant;REV__MCM10|p.N701Tfs*35|2|0.27|ENSG00000065328|chr10:13197741-13197741|A/-|frameshift_variant;REV__MCM10|p.R719Gfs*17|1|0.35|ENSG00000065328|chr10:13198715-13198715|A/-|frameshift_variant;REV__nc|ENSG00000065328|Q7L590|MCM10	20.94693142431847	0.6074874384046576	3				NaN	NaN	0	NaN	8051	7253	15305
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15337	48.861	NaN	952.85	30	0	72.922	0.143	+			49061	VVKDLLEVM	9	49	523.3042050889413	NaN	0	523.3031616210938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVKDLLEVM_	ENST00000418194.6_1_2:174774940-174777875:-|nuORF	24.20275056022122	0.35506675290109213	3				NaN	NaN	0	NaN	8052	7283	15336
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15371	49.032	NaN	1353.1	30	0	83.849	0.143			+	17424	IASVTIQRN	9	60	501.2901879288917	1000.5658229245835	2	501.29144287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IASVTIQRN_	REV__ENSG00000205678|ENST00000381210|TECRL;REV__TECRL|p.F296Sfs*21|1|0.34|ENSG00000205678|chr4:64281505-64281505|A/-|frameshift_variant	37.81151784470057	0.4459294069877048	3				NaN	NaN	0	NaN	8053	7316	15370
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15384	49.095	NaN	2359.6	30	0	1409.1	0.214				-1	 	0	43	467.1926833646491	932.3708137960982	2	467.19268798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	8054	7328	15383
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15385	49.099	NaN	878.86	30	0	57.884	0.034			+	21085	KKNNIVQN	8	46	479.2774891151061	956.5404252970122	2	479.2769775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KKNNIVQN_	REV__tr|U7T484|U7T484_FUSNUAAA+ATPasedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00292PE=3SV=1	40.5726180659479	0.6527593143185008	3				NaN	NaN	0	NaN	8055	7328	15383
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15408	49.206	NaN	3894.4	30	0	2619.1	0.142			+	40881	SVFHTDDP	8	42	459.2034686235995	916.3923843139991	2	459.20416259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVFHTDDP_	REV__ENSG00000140395|ENST00000267973|SKIC8;REV__ENST00000559332.1_1_15:78578005-78578462:-|nuORF;REV__ENST00000559940.1_1_15:78578357-78578495:-|nuORF	25.450171626174864	0.7628259754767981	3				NaN	NaN	0	NaN	8057	7349	15407
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15442	49.32	NaN	447.54	30	0	309.84	0.138	+			1631	AGNASGSG	8	11	310.6347351074219	NaN	0	310.6347351074219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AGNASGSG_	ENST00000569914.5_1_16:67144038-67154090:+|nuORF	8.822329726475273	1.7418937515398478	3				NaN	NaN	0	NaN	8073	7367	15441
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15459	49.375	NaN	1655	30	0	90.461	0.143				-1	RQVTKQSL	8	57	501.2901879288917	1000.5658229245835	2	501.29046630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))RQVTKQSL_	ATRX|p.R2188P|1|0.18|ENSG00000085224|chrX:77557587-77557587|C/G|missense_variant;ENSG00000085224|ENST00000373344|ATRX;nc|ENSG00000085224|P46100-2|ATRX;nc|ENSG00000085224|P46100-3|ATRX;nc|ENSG00000085224|P46100-4|ATRX;nc|ENSG00000085224|P46100-5|ATRX	24.519189625965996	0.7700143146306496	3				NaN	NaN	0	NaN	8081	7376	15458
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15475	49.438	NaN	6390.6	30	0	5303.8	0.142				-1	 	0	29	467.1926183850032	932.3706838368064	2	467.19281005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	8085	7388	15474
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15489	49.479	NaN	1105.4	30	0	515.17	0.14				-1	 	0	38	392.7487042279229	783.4828555226458	2	392.74871826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	8093	7394	15488
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15494	49.496	NaN	870.18	30	0	122.33	0.143			+	17644	IEKELLVVC	9	58	523.3045219159666	NaN	0	523.30517578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IEKELLVVC_	REV__tr|U7T2Z1|U7T2Z1_FUSNU2-C-methyl-D-erythritol2,4-cyclodiphosphatesynthaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=ispFPE=3SV=1	40.77816245573522	0.2702456086868081	3				NaN	NaN	0	NaN	8095	7397	15493
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15506	49.546	NaN	2460.8	30	0	1414.4	0.214			+	50900	YGDHTPLD	8	40	459.20378963633124	916.3930263394625	2	459.2043151855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YGDHTPLD_	REV__ENSG00000081985|ENST00000674203|IL12RB2;REV__nc|ENSG00000081985|Q99665-3|IL12RB2	25.450171626174864	0.7628259754767981	3				NaN	NaN	0	NaN	8098	7406	15505
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15507	49.55	NaN	1152.7	30	0	697.94	0.106	+			13821	GQQAHANM	8	28	428.689419137762	855.364285342324	2	428.6908874511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GQQAHANM_	L1MB4_dup8350|chr19:41723212-41723669:-|1.3793009716132458|0.0459558965036179|4.91|476.0|3|1|sense	13.775330524044264	0.789990904165365	3				NaN	NaN	0	NaN	8099	7406	15505
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15508	49.552	NaN	874.8	30	0	482.17	0.106			+	-1	LSSGGMMSS	9	24	436.67893677589285	871.3433206185857	2	436.67950439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_LSSGGMM(Oxidation (M))SS_	REV__CD96|p.V223Efs*38|1|0.05|ENSG00000153283|chr3:111579102-111579103|-/AGGAAGAA|frameshift_variant	11.511019455917149	0.6112419832031292	3				NaN	NaN	0	NaN	8100	7406	15505
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15509	49.554	NaN	585.89	30	0	83.65	0.033			+	-1	MYSQLCCSQC	10	34	446.16559673101455	NaN	0	446.1652526855469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	3 Carbamidomethyl (C)	_MYSQLC(Carbamidomethyl (C))C(Carbamidomethyl (C))SQC(Carbamidomethyl (C))_	REV__ENSG00000180483|ENST00000376321|DEFB119	14.693671053092006	0.4201028297492154	3				NaN	NaN	0	NaN	8101	7406	15505
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15517	49.583	NaN	1844.7	30	0	683.62	0.214			+	-1	HCGDGSATS	9	38	446.16559673101455	NaN	0	446.1658630371094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_HC(Carbamidomethyl (C))GDGSATS_	REV__GNAS|p.R356C|2|0.14|ENSG00000087460|chr20:58910710-58910710|C/T|missense_variant	18.324413293986947	0.3749620627292244	3				NaN	NaN	0	NaN	8103	7412	15516
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15518	49.587	NaN	507.78	30	0	157.31	0.031			+	-1	AGGASSMQ	8	35	362.6486511230469	NaN	0	362.6486511230469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_AGGASSM(Oxidation (M))Q_	REV__SLX4|p.P1531S|1|0.32|ENSG00000188827|chr16:3589047-3589047|G/A|missense_variant	12.959181472943097	1.7418937515398478	3				NaN	NaN	0	NaN	8104	7412	15516
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15544	49.712	NaN	1814.3	30	0	71.918	0.143	+			37505	SLLGAGRQSL	10	58	501.2901879288917	1000.5658229245835	2	501.7914123535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLLGAGRQSL_	BRWD1|p.A1391Rfs*13|1|0.54|ENSG00000185658|chr21:39210022-39210022|T/-|frameshift_variant;BRWD1|p.D556Vfs*9|1|0.08|ENSG00000185658|chr21:39264678-39264679|-/TCCA|frameshift_variant;BRWD1|p.F202Yfs*5|1|0.38|ENSG00000185658|chr21:39295748-39295749|AG/-|frameshift_variant;BRWD1|p.I251Nfs*3|1|0.35|ENSG00000185658|chr21:39293890-39293891|-/T|frameshift_variant;BRWD1|p.L209Wfs*2|1|0.31|ENSG00000185658|chr21:39294016-39294016|A/-|frameshift_variant;BRWD1|p.M1415Nfs*7|1|0.21|ENSG00000185658|chr21:39206228-39206229|-/T|frameshift_variant;BRWD1|p.R1901Kfs*6|1|0.34|ENSG00000185658|chr21:39197367-39197368|-/T|frameshift_variant;BRWD1|p.S1307Kfs*9|1|0.39|ENSG00000185658|chr21:39210910-39210911|-/T|frameshift_variant;ENSG00000185658|ENST00000342449|BRWD1;nc|ENSG00000185658|Q9NSI6-3|BRWD1;nc|ENSG00000185658|Q9NSI6-4|BRWD1;nc|ENSG00000185658|Q9NSI6|BRWD1	29.550750289552195	0.6385079145554603	3				NaN	NaN	0	NaN	8106	7436	15543
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15557	49.776	NaN	1121.2	30	0	102.14	0.214			+	-1	ELLVMKDLL	9	53	545.3158927611883	1088.6172325891764	2	545.3171997070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ELLVM(Oxidation (M))KDLL_	REV__ENSG00000178732|ENST00000692618|GP5;REV__GP5|p.A116V|1|0.42|ENSG00000178732|chr3:194397936-194397936|G/A|missense_variant	21.9598887501803	0.5980208138527809	3				NaN	NaN	0	NaN	8107	7448	15556
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15558	49.78	NaN	690.2	30	0	240.85	0.034				-1	SYIGGNCY	8	27	467.192772825143	NaN	0	467.1932678222656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SYIGGNC(Carbamidomethyl (C))Y_	ENSG00000198589|ENST00000651943|LRBA;ENST00000503716.5_1_4:151186876-151502511:-|nuORF;ENST00000515096.5_1_4:151186876-151231561:-|nuORF;nc|ENSG00000198589|P50851-2|LRBA;nc|ENSG00000198589|P50851|LRBA	13.775330524044264	1.7418937515398478	3				NaN	NaN	0	NaN	8108	7448	15556
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15591	49.935	NaN	785.53	30	0	37.34	0.143	+			35747	SDTLPRKKT	9	50	523.3045656934289	NaN	0	523.3033447265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SDTLPRKKT_	ENSG00000144824|ENST00000431670|PHLDB2;nc|ENSG00000144824|Q86SQ0-2|PHLDB2;nc|ENSG00000144824|Q86SQ0-3|PHLDB2;PHLDB2|p.K1064Nfs*28|1|0.29|ENSG00000144824|chr3:111967696-111967696|A/-|frameshift_variant	27.882242232435846	0.3367954786602879	3				NaN	NaN	0	NaN	8111	7478	15590
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15629	50.132	NaN	1073.8	30	0	48.727	0.144	+			26536	LTRDKTVVSA	10	58	545.3158927611883	1088.6172325891764	2	545.3173217773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LTRDKTVVSA_	ENSG00000205309|ENST00000389022|NT5M;ENST00000483704.5_1_17:17207728-17250258:+|nuORF	23.52269567125451	0.6877354443478558	3				NaN	NaN	0	NaN	8113	7514	15628
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15657	50.276	NaN	2555.9	30	0	140.64	0.143			+	51564	YYIFTLLL	8	67	523.3045656934289	NaN	0	523.3041381835938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YYIFTLLL_	REV__ENST00000243347.4_1_2:152236083-152236167:+|nuORF	26.79610172149135	1.7418937515398478	3				NaN	NaN	0	NaN	8114	7541	15656
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15698	50.481	NaN	1183.6	30	0	81.825	0.144	+			25536	LPTNLFKAVS	10	62	545.31793230816	NaN	0	545.3182373046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LPTNLFKAVS_	ENSG00000121871|ENST00000475390|SLITRK3;SLITRK3|p.W429Gfs*30|1|0.35|ENSG00000121871|chr3:165189546-165189546|A/-|frameshift_variant	37.81151784470057	0.3760215235790741	3				NaN	NaN	0	NaN	8116	7580	15697
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15728	50.623	NaN	1565.6	30	0	86.864	0.143			+	46912	VITTPLISAM	10	54	523.3045656934289	NaN	0	523.3047485351562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VITTPLISAM_	REV__ZFPM2|p.A243T|1|0.31|ENSG00000169946|chr8:105788912-105788912|G/A|missense_variant	27.882242232435846	0.4086243523356342	3				NaN	NaN	0	NaN	8119	7607	15727
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15736	50.655	NaN	873.27	30	0	71.303	0.145				-1	RCLIKLVTM	9	47	567.3298121619619	1132.6450713907236	2	567.3302612304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_RC(Carbamidomethyl (C))LIKLVTM_	ENST00000574509.1_1_17:694932-694986:+|nuORF	17.364965105453717	0.6112419832031293	3				NaN	NaN	0	NaN	8121	7613	15735
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15780	50.873	NaN	1426.4	30	0	67.631	0.144	+			21635	KPSLKGSKSSA	11	64	545.3166726944517	1088.6187924557032	2	545.3172607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KPSLKGSKSSA_	ENST00000424768.1_1_7:105926115-105926304:-|nuORF	26.063383197487333	0.7164075632144343	3				NaN	NaN	0	NaN	8123	7655	15779
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15800	50.966	NaN	1520.3	30	0	67.7	0.144				-1	MGLEAIIRK	9	51	523.8062038344762	NaN	0	523.80712890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))GLEAIIRK_	ENSG00000196498|ENST00000405201|NCOR2;nc|ENSG00000196498|Q9Y618-2|NCOR2;nc|ENSG00000196498|Q9Y618-4|NCOR2;nc|ENSG00000196498|Q9Y618-5|NCOR2	18.324413293986947	0.3749620627292244	3				NaN	NaN	0	NaN	8125	7673	15799
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15807	50.998	NaN	1153.8	30	0	73.208	0.145	+			15163	GTSGELSVKKK	11	56	567.3298121619619	1132.6450713907236	2	567.3323974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTSGELSVKKK_	PEAK1|p.E655K|1|0.32|ENSG00000173517|chr15:77179964-77179964|C/T|missense_variant	29.170058357718403	0.683821074385409	3				NaN	NaN	0	NaN	8126	7679	15806
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15850	51.216	NaN	2122.6	30	0	111.37	0.144			+	28588	NKKVKGESLS	10	70	545.3166726944517	1088.6187924557032	2	545.318115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NKKVKGESLS_	REV__ENSG00000140632|ENST00000321919|GLYR1;REV__nc|ENSG00000140632|Q49A26-2|GLYR1;REV__nc|ENSG00000140632|Q49A26-3|GLYR1;REV__nc|ENSG00000140632|Q49A26-4|GLYR1	24.519189625965996	0.6795976720565101	3				NaN	NaN	0	NaN	8127	7721	15849
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15875	51.343	NaN	1271.2	30	0	84.855	0.145			+	21518	KNQHTKIHK	9	57	567.3310344121588	NaN	0	567.3305053710938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KNQHTKIHK_	REV__ENSG00000172845|ENST00000310015|SP3;REV__ENSG00000185591|ENST00000327443|SP1;REV__ENST00000465379.1_1_2:174774671-174778005:-|nuORF;REV__nc|ENSG00000172845|Q02447-2|SP3;REV__nc|ENSG00000172845|Q02447-3|SP3;REV__nc|ENSG00000172845|Q02447-4|SP3;REV__nc|ENSG00000172845|Q02447-5|SP3;REV__nc|ENSG00000172845|Q02447-6|SP3;REV__nc|ENSG00000185591|P08047-2|SP1;REV__nc|ENSG00000185591|P08047-3|SP1;REV__SP3|p.G708Vfs*20|1|0.27|ENSG00000172845|chr2:173910166-173910166|T/-|frameshift_variant	26.69291269510374	0.34280015626154364	3				NaN	NaN	0	NaN	8128	7745	15874
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15912	51.529	NaN	1534.1	30	0	65.507	0.145			+	32374	QVAHVQGGIRL	11	73	589.3432239470126	1176.671894960825	2	589.344970703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QVAHVQGGIRL_	REV__ENSG00000062650|ENST00000298767|WAPL;REV__nc|ENSG00000062650|Q7Z5K2-2|WAPL;REV__nc|ENSG00000062650|Q7Z5K2-3|WAPL	24.519189625965996	0.7326048944360514	3				NaN	NaN	0	NaN	8129	7781	15911
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15916	51.545	NaN	273.98	30	0	47.352	0.138			+	31381	QKGNNQPGSA	10	19	334.16506589511744	NaN	0	334.16448974609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QKGNNQPGSA_	REV__ENSG00000165583|ENST00000347757|SSX5;REV__nc|ENSG00000165583|O60225-2|SSX5	15.641811463095205	0.4201028297492154	3				NaN	NaN	0	NaN	8130	7784	15915
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15920	51.562	NaN	1483.2	30	0	48.421	0.144			+	38345	SRLILSAKSD	10	65	545.3166726944517	1088.6187924557032	2	545.31787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SRLILSAKSD_	REV__ENSG00000091409|ENST00000684293|ITGA6;REV__nc|ENSG00000091409|P23229-3|ITGA6;REV__nc|ENSG00000091409|P23229-4|ITGA6;REV__nc|ENSG00000091409|P23229-5|ITGA6;REV__nc|ENSG00000091409|P23229-6|ITGA6;REV__nc|ENSG00000091409|P23229-7|ITGA6;REV__nc|ENSG00000091409|P23229-9|ITGA6;REV__nc|ENSG00000091409|P23229|ITGA6	23.52269567125451	0.6877354443478558	3				NaN	NaN	0	NaN	8131	7787	15919
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15949	51.702	NaN	1567.6	30	0	139.96	0.145			+	-1	LIMLAARKAM	10	67	567.3298314177879	1132.6451099023757	2	567.3307495117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LIM(Oxidation (M))LAARKAM_	REV__HTR1E|p.T135M|1|0.44|ENSG00000168830|chr6:87015738-87015738|C/T|missense_variant	24.20275056022122	0.6821818413321409	3				NaN	NaN	0	NaN	8133	7814	15948
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	16017	52.046	NaN	2623.6	30	0	160.29	0.145				-1	 	0	75	567.3298314177879	1132.6451099023757	2	567.3297729492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	8135	7880	16016
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	16024	52.078	NaN	1726.7	30	0	983.14	0.14				-1	ASCSCWPCMS	10	34	396.80139721261065	NaN	0	396.8014221191406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_ASC(Carbamidomethyl (C))SC(Carbamidomethyl (C))WPCMS_	ENST00000322128.4_1_8:98288239-98288629:-|nuORF	22.579656572578934	0.4201028297492154	3				NaN	NaN	0	NaN	8136	7886	16023
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	16089	52.392	NaN	1549.1	30	0	137.38	0.145			+	34135	RSTSLGLSTVL	11	64	567.3298314177879	1132.6451099023757	2	567.3307495117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RSTSLGLSTVL_	REV__ENSG00000249471|ENST00000336614|ZNF324B;REV__ZNF324B|p.K170Rfs*44|1|0.26|ENSG00000249471|chr19:58455446-58455446|C/-|frameshift_variant	22.579656572578934	0.7529490144093228	3				NaN	NaN	0	NaN	8141	7946	16088
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	16103	52.455	NaN	1384.1	30	0	75.409	0.145			+	-1	LLESLIDKLH	10	69	611.8579700176058	NaN	0	611.8580932617188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LLESLIDKLH_	REV__ENST00000325222.8_1_7:148396099-148427112:+|nuORF;REV__ENST00000409469.5_1_7:148395333-148427112:+|nuORF	26.69291269510374	0.4125295221340092	3				NaN	NaN	0	NaN	8143	7958	16102
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	16122	52.55	NaN	1897.5	30	0	88.925	0.145			+	47584	VRPQPPLQSR	10	66	589.3433199293165	1176.672086925433	2	589.343994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VRPQPPLQSR_	REV__ABCA7|p.L1758P|1|0.44|ENSG00000064687|chr19:1058741-1058741|T/C|missense_variant	26.69291269510374	0.6618461711292317	3				NaN	NaN	0	NaN	8144	7976	16121
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	16188	52.878	NaN	1047.6	30	0	69.55	0.145			+	18809	ITTVVLTTNFL	11	57	611.355551962756	NaN	0	611.3563842773438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ITTVVLTTNFL_	REV__ENSG00000149403|ENST00000527524|GRIK4;REV__ENST00000533291.5_1_11:120531027-120833419:+|nuORF;REV__GRIK4|p.T481Rfs*6|1|0.57|ENSG00000149403|chr11:120905452-120905468|AACGGCACCTGGACGGG/-|frameshift_variant	18.262085536374414	0.456735970842152	3				NaN	NaN	0	NaN	8147	8039	16187
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	16192	52.893	NaN	1971.2	30	0	98.268	0.145			+	49069	VVKGVKSMKAM	11	66	589.3433199293165	1176.672086925433	2	589.342529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVKGVKSMKAM_	REV__ENSG00000172456|ENST00000303721|FGGY;REV__ENST00000471169.5_1_1:60139457-60228253:+|nuORF;REV__ENST00000476939.5_1_1:60125899-60232874:+|nuORF;REV__ENST00000493891.5_1_1:60133021-60228256:+|nuORF;REV__nc|ENSG00000172456|Q96C11-3|FGGY;REV__nc|ENSG00000172456|Q96C11-4|FGGY;REV__nc|ENSG00000172456|Q96C11-5|FGGY;REV__nc|ENSG00000172456|Q96C11-6|FGGY	18.262085536374414	0.7849791996189919	3				NaN	NaN	0	NaN	8148	8042	16191
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	16248	53.175	NaN	999.58	30	0	49.733	0.145			+	2770	ARLQQIPNIVN	11	53	633.3693924815577	NaN	0	633.3689575195312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ARLQQIPNIVN_	REV__CCDC148|p.K420Nfs*15|2|0.39|ENSG00000153237|chr2:158220705-158220705|T/-|frameshift_variant;REV__ENSG00000153237|ENST00000283233|CCDC148;REV__ENST00000451554.1_1_2:159145303-159312956:-|nuORF;REV__nc|ENSG00000153237|Q8NFR7-3|CCDC148;REV__nc|ENSG00000153237|Q8NFR7-4|CCDC148	19.996771675451527	0.456735970842152	3				NaN	NaN	0	NaN	8150	8096	16247
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	16262	53.238	NaN	1571.8	30	0	68.93	0.145			+	30030	PPQPRARATAL	11	71	589.3438736494975	NaN	0	589.3435668945312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PPQPRARATAL_	REV__ENSG00000269113|ENST00000606738|TRABD2B	30.317721548370564	0.4303027717346894	3				NaN	NaN	0	NaN	8152	8108	16261
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	16275	53.301	NaN	1270.6	30	0	41.486	0.146	+			2703	AQQQAKAVLKH	11	68	611.3571496378474	1220.6997463424948	2	611.8594970703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AQQQAKAVLKH_	ENSG00000187609|ENST00000340951|EXD3;ENST00000487745.5_1_9:140201404-140247406:-|nuORF;ENST00000491734.6_1_9:140201404-140249090:-|nuORF;nc|ENSG00000187609|Q8N9H8-2|EXD3;nc|ENSG00000187609|Q8N9H8-3|EXD3	30.317721548370564	0.6717830234747728	3				NaN	NaN	0	NaN	8153	8120	16274
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	16337	53.599	NaN	1092.3	30	0	327.05	0.139				-1	 	0	25	356.74655842736803	NaN	0	356.7465515136719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	8158	8177	16336
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	16347	53.646	NaN	1713.5	30	0	122.41	0.145	+			30051	PPVQQLRDRL	10	68	611.3571496378474	1220.6997463424948	2	611.357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PPVQQLRDRL_	ENSG00000075826|ENST00000370345|SEC31B;ENST00000484848.5_1_10:102255105-102258991:-|nuORF;nc|ENSG00000075826|Q9NQW1-5|SEC31B	14.137123925751023	0.7446123510383054	3				NaN	NaN	0	NaN	8159	8186	16346
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	16423	54.034	NaN	1068.2	30	0	57.167	0.146	+			11394	FLNWVVIFLA	10	52	611.3571166992188	NaN	0	611.3571166992188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FLNWVVIFLA_	ENST00000567020.6_2_16:2552545-2553103:+|nuORF	16.473147378115264	0.4201028297492154	3				NaN	NaN	0	NaN	8160	8261	16422
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	16464	54.236	NaN	1036.7	30	0	41.583	0.145			+	18403	IRSQAHELKAL	11	60	633.3698042958233	1264.7250556584465	2	633.369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IRSQAHELKAL_	REV__ENSG00000140481|ENST00000398814|CCDC33;REV__nc|ENSG00000140481|Q8N5R6-2|CCDC33;REV__nc|ENSG00000140481|Q8N5R6-4|CCDC33;REV__nc|ENSG00000140481|Q8N5R6-5|CCDC33;REV__nc|ENSG00000140481|Q8N5R6|CCDC33	28.081489160057373	0.6952392775027776	3				NaN	NaN	0	NaN	8162	8300	16463
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	105	0.60204	NaN	279150	30	0	239710	0.135				-1	 	0	98	223.0635986328125	NaN	0	223.0635986328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	0	103	104
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	580	3.0518	NaN	751.7	30	0	217.74	0.143				-1	 	0	28	331.00206909640264	NaN	0	331.0020446777344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1	577	579
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	623	3.269	NaN	263290	30	0	236160	0.135				-1	 	0	91	223.0637664794922	NaN	0	223.0637664794922	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2	619	622
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	858	4.4778	NaN	2228.6	30	0	220.79	0.135				-1	 	0	55	198.18531799316406	NaN	0	198.18531799316406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3	853	857
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	1534	7.9809	NaN	149460	30	0	132980	0.139				-1	 	0	72	223.06361389160156	NaN	0	223.06361389160156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4	1528	1533
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	1601	8.3242	NaN	2634.3	30	0	1220.9	0.136				-1	 	0	57	267.00059008505764	NaN	0	267.0006103515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5	1594	1600
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	1875	9.7367	NaN	803.34	30	0	235.3	0.143				-1	 	0	23	331.0020685576888	NaN	0	331.0019226074219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	6	1867	1874
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2029	10.519	NaN	1337.1	30	0	729.04	0.144	+			4838	ATPKKASKPK	10	26	528.3319618273887	NaN	0	528.3319702148438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATPKKASKPK_	ENSG00000189060|ENST00000340857|H1-0;nc|ENSG00000189060|P07305-2|H1-0	23.37791116691581	0.4201028297492154	3				NaN	NaN	0	NaN	7	2020	2028
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2091	10.92	NaN	1050.5	30	0	381.62	0.142	+			15032	GTNKVASQK	9	34	466.76180790365885	931.5090628741177	2	466.7614440917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTNKVASQK_	ENSG00000117519|ENST00000370206|CNN3;ENST00000401596.1_1_6:6535542-6535761:+|nuORF;nc|ENSG00000117519|Q15417-2|CNN3;nc|ENSG00000117519|Q15417-3|CNN3	46.45678178249821	0.34452392205506005	3				NaN	NaN	0	NaN	9	2080	2090
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2163	11.275	NaN	636.87	30	0	138.5	0.143	+			22898	KVMKDAKTK	9	30	524.8133544921875	NaN	0	524.8133544921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVMKDAKTK_	ENSG00000198900|ENST00000361337|TOP1	27.047317107675042	0.34101084205454363	3				NaN	NaN	0	NaN	12	2149	2162
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2174	11.322	NaN	1924	30	0	733.2	0.142				-1	PHMLVGRK	8	19	477.27160293523013	952.5286529372603	2	477.271728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_PHM(Oxidation (M))LVGRK_	ENST00000508784.5_1_4:146824055-146859708:-|nuORF	8.822329726475273	0.7821568878176242	3				NaN	NaN	0	NaN	14	2158	2173
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2185	11.359	NaN	4307.1	30	0	2140.7	0.143				-1	 	0	21	512.8088082684842	1023.6030636037684	2	512.8088989257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	19	2164	2184
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2221	11.53	NaN	1914.4	30	0	172.46	0.135				-1	 	0	52	198.18528747558594	NaN	0	198.18528747558594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	22	2197	2220
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2241	11.623	NaN	5221.1	30	0	2209.7	0.214				-1	 	0	31	486.2588054725707	970.5030580119414	2	486.2579345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	24	2215	2240
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2242	11.626	NaN	2292.4	30	0	1043.8	0.036				-1	WFPSDCLE	8	14	527.2216580869889	1052.4287632407777	2	527.2208251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_WFPSDC(Carbamidomethyl (C))LE_	ENSG00000161681|ENST00000293441|SHANK1;nc|ENSG00000161681|Q9Y566-3|SHANK1;SHANK1|p.L2065Sfs*68|1|0.18|ENSG00000161681|chr19:50662259-50662259|C/-|frameshift_variant;SHANK1|p.T693Pfs*33|2|0.23|ENSG00000161681|chr19:50688940-50688940|G/-|frameshift_variant	8.822329726475273	0.7821568878176242	3				NaN	NaN	0	NaN	25	2215	2240
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2246	11.64	NaN	6518.8	30	0	1442.2	0.214				-1	KSANICEHS	9	50	523.2400037199325	1044.4654545066649	2	523.239990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_KSANIC(Carbamidomethyl (C))EHS_	ENST00000220597.4_1_8:81881203-81881314:-|nuORF	34.172542307311794	0.4838870758800184	3				NaN	NaN	0	NaN	26	2218	2245
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2247	11.644	NaN	9407.8	30	0	2110	0.106			+	-1	LSASGQNMDM	10	48	535.2197948854671	1068.425036837734	2	535.2200927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LSASGQNMDM(Oxidation (M))_	REV__ENSG00000184788|ENST00000644105|SATL1;REV__nc|ENSG00000184788|Q86VE3-2|SATL1	26.69291269510374	0.6618461711292317	3				NaN	NaN	0	NaN	27	2218	2245
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2248	11.646	NaN	6415	30	0	1764.5	0.106			+	-1	YPMTSTTAL	9	51	500.73595896010556	999.4573649870111	2	500.7353820800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_YPM(Oxidation (M))TSTTAL_	REV__ALDOA|p.E156Rfs*45|1|0.04|ENSG00000149925|chr16:30068902-30068903|-/AA|frameshift_variant;REV__ENSG00000149925|ENST00000642816|ALDOA;REV__ENST00000564521.6_1_16:30075769-30079042:+|nuORF;REV__ENST00000566012.1_1_16:30077179-30079547:+|nuORF;REV__ENST00000567555.1_1_16:30077179-30078758:+|nuORF	23.04248740728303	0.5879033540491928	3				NaN	NaN	0	NaN	28	2218	2245
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2249	11.648	NaN	11277	30	0	5024.7	0.106			+	-1	YMKSASEAL	9	38	508.2414052287565	1014.468257524313	2	508.240966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_YM(Oxidation (M))KSASEAL_	REV__DYNC2H1|p.L4021Wfs*5|1|0.3|ENSG00000187240|chr11:103358262-103358262|T/-|frameshift_variant;REV__DYNC2H1|p.P3966Hfs*44|1|0.22|ENSG00000187240|chr11:103321194-103321194|T/-|frameshift_variant;REV__ENSG00000187240|ENST00000375735|DYNC2H1;REV__nc|ENSG00000187240|Q8NCM8-2|DYNC2H1	12.206847966760668	0.6112419832031292	3				NaN	NaN	0	NaN	29	2218	2245
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2250	11.65	NaN	12536	30	0	3856	0.106				-1	GRHWHMDH	8	39	546.2320961180524	1090.4496393029046	2	546.2310791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_GRHWHM(Oxidation (M))DH_	ENSG00000012211|ENST00000599218|PRICKLE3;nc|ENSG00000012211|O43900-2|PRICKLE3	25.450171626174864	0.7628259754767981	3				NaN	NaN	0	NaN	30	2218	2245
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2251	11.651	NaN	15201	30	0	3755.7	0.106			+	-1	MVEEMPCMI	9	26	594.2258524156955	1186.437151898191	2	594.2256469726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),3 Oxidation (M)	_M(Oxidation (M))VEEM(Oxidation (M))PC(Carbamidomethyl (C))M(Oxidation (M))I_	REV__ENSG00000164830|ENST00000517566|OXR1;REV__nc|ENSG00000164830|Q8N573-2|OXR1;REV__nc|ENSG00000164830|Q8N573-3|OXR1;REV__nc|ENSG00000164830|Q8N573-5|OXR1;REV__nc|ENSG00000164830|Q8N573|OXR1;REV__OXR1|p.E529Kfs*13|1|0.09|ENSG00000164830|chr8:106707098-106707098|A/-|frameshift_variant	7.690282842768113	0.6112419832031293	3				NaN	NaN	0	NaN	31	2218	2245
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2252	11.653	NaN	13476	30	0	2677.4	0.036				-1	FCQEKGVDE	9	24	556.2409461733909	1110.4673394135816	2	556.2371215820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_FC(Carbamidomethyl (C))QEKGVDE_	ENSG00000174236|ENST00000310791|REP15	15.641811463095205	0.6112419832031292	3				NaN	NaN	0	NaN	32	2218	2245
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2263	11.676	NaN	19039	30	0	6069.9	0.214	+			38781	SSMLIHILL	9	58	513.8038418174589	1025.5931307017177	2	513.803466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSMLIHILL_	ENSG00000145623|ENST00000274276|OSMR;OSMR|p.N900Tfs*3|1|0.34|ENSG00000145623|chr5:38933197-38933197|A/-|frameshift_variant	35.200714571348534	0.47427825964483533	3				NaN	NaN	0	NaN	40	2221	2262
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2264	11.679	NaN	12324	30	0	2819.6	0.106			+	7342	DAWFYDCY	8	52	541.6981032237713	NaN	0	541.6981811523438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DAWFYDCY_	REV__ENSG00000007237|ENST00000432992|GAS7;REV__nc|ENSG00000007237|O60861-1|GAS7;REV__nc|ENSG00000007237|O60861-2|GAS7;REV__nc|ENSG00000007237|O60861-4|GAS7	33.51558372728122	1.7418937515398478	3				NaN	NaN	0	NaN	41	2221	2262
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2265	11.681	NaN	11770	30	0	3342.7	0.106				-1	YEEELYDC	8	26	560.7085940987566	1119.4026352643132	2	560.70849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_YEEELYDC(Carbamidomethyl (C))_	ENSG00000185290|ENST00000329309|NUPR2	8.822329726475273	0.7821568878176242	3				NaN	NaN	0	NaN	42	2221	2262
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2266	11.683	NaN	23052	30	0	5252.7	0.106				-1	KCFDDCMC	8	33	568.1851706617226	1134.3557883902452	2	568.1844482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	3 Carbamidomethyl (C)	_KC(Carbamidomethyl (C))FDDC(Carbamidomethyl (C))MC(Carbamidomethyl (C))_	ENSG00000162490|ENST00000294485|DRAXIN	13.775330524044264	0.789990904165365	3				NaN	NaN	0	NaN	43	2221	2262
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2267	11.685	NaN	14694	30	0	3802	0.106			+	-1	MTDEFEENM	9	41	589.2028201489753	1176.3910873647505	2	589.2034912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Oxidation (M)	_M(Oxidation (M))TDEFEENM(Oxidation (M))_	REV__ENSG00000118007|ENST00000383202|STAG1;REV__nc|ENSG00000118007|Q8WVM7-2|STAG1;REV__NCK1-STAG1|1|fusion;REV__NCK1-STAG1|2|fusion	25.57405402267927	0.5642445186134241	3				NaN	NaN	0	NaN	44	2221	2262
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2268	11.687	NaN	15398	30	0	3264.9	0.106				-1	CCSEWDCMCV	10	38	626.1845750542249	NaN	0	626.1846313476562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),Oxidation (M)	_C(Carbamidomethyl (C))CSEWDCM(Oxidation (M))CV_	ENSG00000186891|ENST00000379268|TNFRSF18;nc|ENSG00000186891|Q9Y5U5-2|TNFRSF18;nc|ENSG00000186891|Q9Y5U5-3|TNFRSF18	6.735540347417125	0.42010282974921537	3				NaN	NaN	0	NaN	45	2221	2262
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2269	11.688	NaN	16221	30	0	1863	0.039				-1	YNCMCNSSCM	10	28	643.1895141601562	NaN	0	643.1895141601562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C),Oxidation (M)	_YNC(Carbamidomethyl (C))M(Oxidation (M))C(Carbamidomethyl (C))NSSCM_	TP53|p.Y236C|1|0.64|ENSG00000141510|chr17:7674256-7674256|T/C|missense_variant	5.55782384252955	0.4201028297492154	3				NaN	NaN	0	NaN	46	2221	2262
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2280	11.714	NaN	3717.6	30	0	749.15	0.214	+			21660	KPYLCKMC	8	30	493.23648923081373	984.4584255284275	2	493.2357177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KPYLCKMC_	ENSG00000043355|ENST00000376335|ZIC2;ENSG00000152977|ENST00000282928|ZIC1	13.775330524044264	0.789990904165365	3				NaN	NaN	0	NaN	54	2224	2279
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2281	11.718	NaN	2271.2	30	0	434.51	0.106	+			28272	NDWVGPPNDN	10	13	564.2396240234375	NaN	0	564.2396240234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NDWVGPPNDN_	ENSG00000174876|ENST00000330330|AMY1B;ENSG00000187733|ENST00000622339|AMY1C;ENSG00000237763|ENST00000370083|AMY1A	9.182911543092327	0.4201028297492154	3				NaN	NaN	0	NaN	55	2224	2279
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2282	11.72	NaN	3013.2	30	0	909.22	0.106				-1	LPLPYMIQC	9	19	567.7880393719756	1133.5615258107512	2	567.7880249023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LPLPYMIQC(Carbamidomethyl (C))_	ENSG00000178597|ENST00000319098|PSAPL1	12.959181472943097	0.6112419832031292	3				NaN	NaN	0	NaN	56	2224	2279
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2283	11.721	NaN	1295.4	30	0	474.19	0.106			+	-1	GNQCPSSACN	10	18	547.7028198242188	NaN	0	547.7028198242188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_GNQC(Carbamidomethyl (C))PSSAC(Carbamidomethyl (C))N_	REV__ENSG00000185559|ENST00000341267|DLK1;REV__nc|ENSG00000185559|P80370-2|DLK1	9.182911543092327	0.4201028297492154	3				NaN	NaN	0	NaN	57	2224	2279
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2284	11.723	NaN	2021.3	30	0	484.23	0.106				-1	SMCICQMRN	9	22	559.217041015625	NaN	0	559.217041015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Oxidation (M)	_SM(Oxidation (M))CICQM(Oxidation (M))RN_	BRINP1|p.R547C|1|0.59|ENSG00000078725|chr9:119167731-119167731|G/A|missense_variant	12.206847966760668	0.39566704307768535	3				NaN	NaN	0	NaN	58	2224	2279
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2285	11.725	NaN	1216.8	30	0	518.28	0.106			+	-1	CPCCPPCAL	9	16	539.2013549804688	NaN	0	539.2013549804688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	3 Carbamidomethyl (C)	_CPC(Carbamidomethyl (C))C(Carbamidomethyl (C))PPC(Carbamidomethyl (C))AL_	REV__ARHGEF15|p.L618Rfs*24|1|0.38|ENSG00000198844|chr17:8318643-8318643|T/-|frameshift_variant;REV__ARHGEF15|p.P297Hfs*39|1|0.28|ENSG00000198844|chr17:8313205-8313205|C/-|frameshift_variant;REV__ENSG00000198844|ENST00000361926|ARHGEF15	4.316272785109212	0.4072763090772754	3				NaN	NaN	0	NaN	59	2224	2279
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2286	11.727	NaN	2088.6	30	0	452.24	0.037				-1	PKGHGCVSGWG	11	23	571.2642822265625	NaN	0	571.2642822265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_PKGHGC(Carbamidomethyl (C))VSGWG_	ENST00000222761.7_1_7:27282555-27282981:+|nuORF	13.45404412870281	0.456735970842152	3				NaN	NaN	0	NaN	60	2224	2279
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2314	11.851	NaN	1284.9	30	0	503.58	0.142	+			2888	ASASSLKKK	9	37	460.2820977796104	918.5496426260208	2	460.2812194824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASASSLKKK_	ENSG00000075618|ENST00000382361|FSCN1	49.536043120802724	0.308405419312776	3				NaN	NaN	0	NaN	64	2248	2313
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2319	11.867	NaN	1378.9	30	0	425.11	0.144			+	-1	RSTGHFCTK	9	20	547.2650072784162	1092.5154616236323	2	547.2655639648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_RSTGHFC(Carbamidomethyl (C))TK_	REV__ENST00000361138.6_1_9:72879312-72879357:+|nuORF	15.641811463095205	0.6112419832031292	3				NaN	NaN	0	NaN	66	2251	2318
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2333	11.918	NaN	1262.4	30	0	316.7	0.142			+	-1	IGLSNSSMAG	10	16	476.7251354102861	951.4357178873722	2	476.72491455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_IGLSNSSM(Oxidation (M))AG_	REV__ENSG00000118900|ENST00000262376|UBN1;REV__nc|ENSG00000118900|Q9NPG3-2|UBN1	9.182911543092327	0.7697862422657429	3				NaN	NaN	0	NaN	71	2260	2332
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2344	11.966	NaN	3151.1	30	0	1056.8	0.143	+			3413	ASQKALKEK	9	53	501.80112243733043	1001.5876919414609	2	501.8005676269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASQKALKEK_	ENSG00000131143|ENST00000253452|COX4I1;ENST00000567266.5_1_16:85833348-85838718:+|nuORF;ENST00000569997.1_1_16:85838427-85838718:+|nuORF	99.01295224348159	0.040209060045561164	3				NaN	NaN	0	NaN	73	2269	2343
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2348	11.982	NaN	933.13	30	0	438.78	0.142			+	3132	ASHIFLFH	8	17	486.2588054725707	970.5030580119414	2	486.25775146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASHIFLFH_	REV__ENSG00000187747|ENST00000345043|OR52B6	5.08689130490037	0.7762486542322466	3				NaN	NaN	0	NaN	74	2272	2347
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2356	12.013	NaN	1071.9	30	0	146.07	0.143	+			19595	KDELELFV	8	35	496.76587654011246	NaN	0	496.7663269042969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KDELELFV_	CELSR1|p.G1602Vfs*104|1|0.17|ENSG00000075275|chr22:46410526-46410526|C/-|frameshift_variant;CELSR1|p.I2650Sfs*5|1|0.42|ENSG00000075275|chr22:46369187-46369187|T/-|frameshift_variant;CELSR1|p.R2275Qfs*18|1|0.18|ENSG00000075275|chr22:46384603-46384604|-/G|frameshift_variant;CELSR1|p.T1849Rfs*8|2|0.25|ENSG00000075275|chr22:46397831-46397831|C/-|frameshift_variant;ENSG00000075275|ENST00000674500|CELSR1;ENST00000497509.1_1_22:46926386-46930076:-|nuORF;nc|ENSG00000075275|Q9NYQ6-2|CELSR1;nc|ENSG00000075275|Q9NYQ6|CELSR1	30.503639358989545	1.7418937515398478	3				NaN	NaN	0	NaN	76	2278	2355
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2373	12.091	NaN	1106.6	30	0	256.88	0.144				-1	CYQVFPRP	8	19	533.7589873271035	NaN	0	533.759521484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_C(Carbamidomethyl (C))YQVFPRP_	ENST00000457056.5_1_X:102003757-102003874:+|nuORF	8.822329726475273	1.7418937515398478	3				NaN	NaN	0	NaN	78	2293	2372
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2384	12.138	NaN	2524.4	30	0	405.55	0.142	+			34978	SAAPPQEKK	9	50	478.2639123522855	954.513271771371	2	478.2637939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAAPPQEKK_	CAST|p.E474Kfs*10|1|0.39|ENSG00000153113|chr5:96754695-96754695|A/-|frameshift_variant;ENSG00000153113|ENST00000675179|CAST;ENST00000513666.5_1_5:96073558-96090478:+|nuORF;nc|ENSG00000153113|P20810-10|CAST;nc|ENSG00000153113|P20810-2|CAST;nc|ENSG00000153113|P20810-3|CAST;nc|ENSG00000153113|P20810-4|CAST;nc|ENSG00000153113|P20810-5|CAST;nc|ENSG00000153113|P20810-7|CAST;nc|ENSG00000153113|P20810-8|CAST;nc|ENSG00000153113|P20810-9|CAST;nc|ENSG00000153113|P20810|CAST	53.08895987439943	0.27122541748218487	3				NaN	NaN	0	NaN	80	2302	2383
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2395	12.186	NaN	1516.7	30	0	402.57	0.144	+			39670	STIGETSKKK	10	46	539.8085212174125	NaN	0	539.8082885742188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STIGETSKKK_	ENSG00000100461|ENST00000359890|RBM23;ENST00000554955.5_1_14:23375339-23380602:-|nuORF;ENST00000557667.5_1_14:23373372-23380602:-|nuORF;nc|ENSG00000100461|Q86U06-3|RBM23	65.2775769800794	0.19118069291481515	3				NaN	NaN	0	NaN	82	2311	2394
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2409	12.235	NaN	6458	30	0	1900.9	0.145				-1	SCGRLGRGRCS	11	24	604.7907677343103	1207.5669825354205	2	604.790771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SCGRLGRGRC(Carbamidomethyl (C))S_	ENST00000336865.6_1_12:109536120-109536210:+|nuORF	16.71738777980365	0.7922119881075679	3				NaN	NaN	0	NaN	87	2320	2408
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2416	12.267	NaN	1157.6	30	0	320.04	0.142			+	41232	SVLFLGFK	8	40	455.7716743108603	NaN	0	455.7711181640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVLFLGFK_	REV__ENST00000288937.6_1_11:6702876-6703137:-|nuORF	42.47446043378293	1.7418937515398478	3				NaN	NaN	0	NaN	88	2326	2415
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2429	12.316	NaN	2543.8	30	0	300.21	0.144			+	48002	VSQKRINTE	9	62	537.7990563307085	1073.5835597282169	2	537.7992553710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSQKRINTE_	REV__ENSG00000034971|ENST00000037502|MYOC	61.691277971877994	0.19951612995419254	3				NaN	NaN	0	NaN	92	2335	2428
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2433	12.332	NaN	1244.1	30	0	210.62	0.214	+			5740	AVGAKLTWE	9	45	487.76656714654365	NaN	0	487.7668762207031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVGAKLTWE_	ENSG00000275395|ENST00000616721|FCGBP;FCGBP-ACSS2|1|fusion;nc|ENSG00000275395|Q9Y6R7|FCGBP	44.377184641726394	0.24544280798894275	3				NaN	NaN	0	NaN	93	2338	2432
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2434	12.336	NaN	670.17	30	0	116.65	0.035				-1	REKGQMPH	8	26	499.74652099609375	NaN	0	499.74652099609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_REKGQM(Oxidation (M))PH_	ENSG00000217930|ENST00000318059|PAM16;ENST00000573236.5_1_16:4390322-4393442:-|nuORF;ENST00000573450.5_1_16:4390322-4391533:-|nuORF;nc|ENSG00000262246|P57737-3|CORO7	25.450171626174864	1.7418937515398478	3				NaN	NaN	0	NaN	94	2338	2432
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2438	12.35	NaN	1149.5	30	0	358.3	0.144	+			32578	QWVYKVAK	8	30	511.29300295667775	1020.5714529801555	2	511.2929992675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QWVYKVAK_	DDX50|p.K339Nfs*3|2|0.28|ENSG00000107625|chr10:68914126-68914126|A/-|frameshift_variant;ENSG00000107625|ENST00000373585|DDX50	52.29916861842294	0.578018602984656	3				NaN	NaN	0	NaN	95	2341	2437
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2448	12.397	NaN	897.75	30	0	231.47	0.144			+	31175	QGLLHQQQQ	9	25	540.2840576171875	NaN	0	540.2840576171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QGLLHQQQQ_	REV__ENSG00000167548|ENST00000301067|KMT2D;REV__KMT2D|p.A5076Hfs*2|1|0.12|ENSG00000167548|chr12:49026740-49026740|C/-|frameshift_variant;REV__KMT2D|p.G5182Afs*61|1|0.57|ENSG00000167548|chr12:49026421-49026421|C/-|frameshift_variant;REV__KMT2D|p.Q4156Nfs*5|1|0.15|ENSG00000167548|chr12:49032239-49032239|G/-|frameshift_variant;REV__KMT2D|p.S4327Afs*57|1|0.44|ENSG00000167548|chr12:49031727-49031727|G/-|frameshift_variant;REV__KMT2D|p.T4629Hfs*18|1|0.31|ENSG00000167548|chr12:49030394-49030395|-/G|frameshift_variant;REV__KMT2D|p.T4629Pfs*11|1|0.27|ENSG00000167548|chr12:49030395-49030395|G/-|frameshift_variant;REV__nc|ENSG00000167548|O14686-3|KMT2D	29.14955571784316	0.3303970763161698	3				NaN	NaN	0	NaN	96	2350	2447
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2452	12.413	NaN	1090.5	30	0	532.33	0.141	+			13121	GGGRAAVHR	9	22	440.74586956420114	879.4771861952023	2	440.7456970214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GGGRAAVHR_	ENST00000216124.9_1_22:51065986-51066424:-|nuORF;ENST00000356098.9_1_22:51065986-51066424:-|nuORF;ENST00000395621.7_1_22:51065986-51066424:-|nuORF	7.193352174278301	0.6112419832031293	3				NaN	NaN	0	NaN	97	2353	2451
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2465	12.462	NaN	855.17	30	0	134.66	0.144			+	6795	CFSFLIKKK	9	25	557.3270263671875	NaN	0	557.3270263671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CFSFLIKKK_	REV__ENSG00000144331|ENST00000410066|ZNF385B;REV__nc|ENSG00000144331|Q569K4-5|ZNF385B;REV__nc|ENSG00000144331|Q569K4|ZNF385B;REV__ZNF385B|p.L284Ifs*25|1|0.14|ENSG00000144331|chr2:179446591-179446592|-/T|frameshift_variant	16.473147378115264	0.38122769658151995	3				NaN	NaN	0	NaN	101	2362	2464
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2470	12.478	NaN	2795.1	30	0	528.46	0.141	+			44290	TSAPAAKPK	9	47	435.75614624618754	869.4977395591751	2	435.75518798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSAPAAKPK_	ENSG00000189060|ENST00000340857|H1-0	58.78195531508484	0.22376836668196862	3				NaN	NaN	0	NaN	103	2365	2469
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2480	12.512	NaN	5170.1	30	0	1882.4	0.214	+			33418	RIHTMEKQ	8	52	521.7781647412262	1041.5417765492523	2	521.7781982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RIHTMEKQ_	ENSG00000197841|ENST00000492450|ZNF181;nc|ENSG00000197841|Q2M3W8-2|ZNF181;nc|ENSG00000197841|Q2M3W8-3|ZNF181	42.396135135203025	0.6414440140393314	3				NaN	NaN	0	NaN	107	2371	2479
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2481	12.516	NaN	1711.5	30	0	555.41	0.106	+			38820	SSNDKVIKK	9	41	509.7986412970257	1017.5827296608514	2	509.79876708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSNDKVIKK_	ALDH3A1|p.P445Rfs*6|4|0.31|ENSG00000108602|chr17:19738336-19738336|G/-|frameshift_variant;ENSG00000108602|ENST00000225740|ALDH3A1;ENST00000479677.6_1_17:19641536-19646703:-|nuORF	77.31757898189308	0.1091473830098891	3				NaN	NaN	0	NaN	108	2371	2479
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2482	12.518	NaN	2019	30	0	295.99	0.106			+	-1	RLCHGSRAC	9	21	558.75951396883	1115.50447500446	2	558.7597045898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_RLC(Carbamidomethyl (C))HGSRAC(Carbamidomethyl (C))_	REV__ENST00000281282.5_1_15:57731410-57731593:+|nuORF	15.641811463095205	0.6112419832031292	3				NaN	NaN	0	NaN	109	2371	2479
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2483	12.519	NaN	2593.2	30	0	1096.9	0.106			+	-1	VPIGMGYCGPD	11	18	562.7406286300946	NaN	0	562.7409057617188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_VPIGM(Oxidation (M))GYCGPD_	REV__ME3|p.L197P|1|0.39|ENSG00000151376|chr11:86498078-86498078|A/G|missense_variant	15.641811463095205	0.456735970842152	3				NaN	NaN	0	NaN	110	2371	2479
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2484	12.521	NaN	2628.1	30	0	596.65	0.039			+	-1	ECTDGTYGPRC	11	15	629.7442626953125	NaN	0	629.7442626953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_ECTDGTYGPRC(Carbamidomethyl (C))_	REV__DLL1|p.A323D|1|0.08|ENSG00000198719|chr6:170285318-170285318|G/T|missense_variant	5.220141733780809	0.456735970842152	3				NaN	NaN	0	NaN	111	2371	2479
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2494	12.552	NaN	707.02	30	0	70.985	0.142	+			3123	ASGTSLHQK	9	38	464.7464263269705	927.478299720741	2	465.2481689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASGTSLHQK_	ENSG00000157426|ENST00000205214|AASDH;ENST00000503808.5_1_4:57204874-57250274:-|nuORF;nc|ENSG00000157426|Q4L235-2|AASDH;nc|ENSG00000157426|Q4L235-3|AASDH;nc|ENSG00000157426|Q4L235-4|AASDH	52.936696900407355	0.27249468807391813	3				NaN	NaN	0	NaN	115	2377	2493
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2510	12.615	NaN	3797.8	30	0	1102.1	0.142	+			14943	GTMGVSKHK	9	55	472.75253452455485	943.4905161159097	2	472.7523498535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTMGVSKHK_	ENSG00000125676|ENST00000245838|THOC2;nc|ENSG00000125676|Q8NI27-2|THOC2	104.0567914643314	0.03506238181059741	3				NaN	NaN	0	NaN	119	2389	2509
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2518	12.647	NaN	1337.7	30	0	169.89	0.142			+	37390	SLGAEPKQK	9	49	479.2718200683594	NaN	0	479.2718200683594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLGAEPKQK_	REV__ENSG00000126467|ENST00000246801|TSKS;REV__nc|ENSG00000126467|Q9UJT2-2|TSKS	30.503639358989545	0.3235605894931338	3				NaN	NaN	0	NaN	121	2395	2517
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2524	12.665	NaN	2095.5	30	0	385.21	0.142	+			44471	TSQNLPKR	8	47	472.26956604085984	942.5245791485197	2	472.2688293457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSQNLPKR_	ENSG00000131732|ENST00000407610|ZCCHC9;ZCCHC9|p.N51Mfs*18|1|0.22|ENSG00000131732|chr5:81304905-81304905|A/-|frameshift_variant	73.97473282117947	0.3737790450121076	3				NaN	NaN	0	NaN	124	2398	2523
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2528	12.681	NaN	1924.3	30	0	335.96	0.214	+			25217	LMPLCLWIY	9	28	576.3023737956589	1150.5901946581178	2	576.3023071289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LMPLCLWIY_	ENSG00000145248|ENST00000273861|SLC10A4	15.641811463095205	0.6112419832031292	3				NaN	NaN	0	NaN	125	2401	2527
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2529	12.685	NaN	890.94	30	0	171.26	0.034	+			12312	GDEYLGKGK	9	31	483.74950042310434	NaN	0	483.7497863769531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GDEYLGKGK_	tr|U7SV00|U7SV00_FUSNUCardiolipinsynthaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01072PE=3SV=1	42.396135135203025	0.2590952873412954	3				NaN	NaN	0	NaN	126	2401	2527
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2533	12.699	NaN	896.38	30	0	161.28	0.142			+	35000	SAATRPQPK	9	44	478.2692921398237	954.5240313464474	2	478.2700500488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAATRPQPK_	REV__ENSG00000186912|ENST00000374519|P2RY4	31.529811441608018	0.5085848003137583	3				NaN	NaN	0	NaN	127	2404	2532
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2545	12.746	NaN	14671	30	0	1776.1	0.145			+	47434	VPSVRSDQRQ	10	79	586.3126588487928	1170.6107647643855	2	586.3131103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VPSVRSDQRQ_	REV__nc|ENSG00000196923|Q9NR12-4|PDLIM7	71.87747018426188	0.26198133118427214	3				NaN	NaN	0	NaN	130	2413	2544
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2550	12.763	NaN	8228.1	30	0	3361.2	0.214	+			42037	SWFINQSVQS	10	39	598.2914566615356	1194.568360389871	2	598.2918090820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SWFINQSVQS_	ENSG00000136104|ENST00000336617|RNASEH2B;ENST00000495244.6_1_13:51502574-51530607:+|nuORF;nc|ENSG00000136104|Q5TBB1-2|RNASEH2B	39.252832667884924	0.5560298534376815	3				NaN	NaN	0	NaN	132	2416	2549
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2551	12.766	NaN	5083.8	30	0	795.2	0.106			+	-1	MKHMTSTMRD	10	48	635.2723753973814	1268.5301978615628	2	635.2727661132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Oxidation (M)	_M(Oxidation (M))KHMTSTM(Oxidation (M))RD_	REV__ENSG00000065060|ENST00000192788|BLTP3A	23.52269567125451	0.6877354443478558	3				NaN	NaN	0	NaN	133	2416	2549
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2552	12.768	NaN	3372	30	0	845.87	0.106				-1	TNMVWYDWM	9	17	639.2537824836154	1276.4930120340307	2	639.2550659179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Oxidation (M)	_TNM(Oxidation (M))VWYDWM(Oxidation (M))_	ENSG00000196236|ENST00000357137|XPNPEP3;nc|ENSG00000196236|Q9NQH7-2|XPNPEP3;nc|ENSG00000196236|Q9NQH7-3|XPNPEP3;nc|ENSG00000196236|Q9NQH7-4|XPNPEP3;nc|ENSG00000196236|Q9NQH7-5|XPNPEP3	7.690282842768113	0.6112419832031293	3				NaN	NaN	0	NaN	134	2416	2549
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2553	12.77	NaN	3934	30	0	1231.2	0.106			+	30812	QEDHVSYNFV	10	32	619.2751663480101	1236.53577976282	2	619.2772827148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QEDHVSYNFV_	REV__COL24A1|p.P563Lfs*42|1|0.04|ENSG00000171502|chr1:86089193-86089193|G/-|frameshift_variant;REV__ENSG00000171502|ENST00000370571|COL24A1;REV__nc|ENSG00000171502|Q17RW2-2|COL24A1	14.137123925751023	0.7446123510383054	3				NaN	NaN	0	NaN	135	2416	2549
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2554	12.772	NaN	2471.3	30	0	350.96	0.106	+			1983	AKALMHFGEHD	11	28	628.2974977248366	NaN	0	628.2991333007812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AKALMHFGEHD_	ENSG00000146122|ENST00000274867|DAAM2;nc|ENSG00000146122|Q86T65-4|DAAM2	14.864876125193954	0.456735970842152	3				NaN	NaN	0	NaN	136	2416	2549
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2555	12.774	NaN	3834.5	30	0	747.08	0.039			+	-1	WCMSTSNCQKA	11	22	658.263544751904	1314.5125365706078	2	658.265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_WC(Carbamidomethyl (C))MSTSNCQKA_	REV__EPCAM|p.G112S|1|0.22|ENSG00000119888|chr2:47373957-47373957|G/A|missense_variant	5.921104790170933	0.8427637746914891	3				NaN	NaN	0	NaN	137	2416	2549
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2559	12.788	NaN	2122.6	30	0	361.36	0.214	+			6265	AVSKVSTNK	9	55	467.27205791270126	932.5295628922025	2	467.2713623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVSKVSTNK_	ENSG00000173744|ENST00000310078|AGFG1;nc|ENSG00000173744|P52594-2|AGFG1;nc|ENSG00000173744|P52594-3|AGFG1;nc|ENSG00000173744|P52594-4|AGFG1	63.53385203322761	0.18415635464017938	3				NaN	NaN	0	NaN	138	2419	2558
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2560	12.791	NaN	2546.1	30	0	302.6	0.041			+	-1	CCFDHDGELVC	11	16	706.2572115845863	1410.4998702359726	2	706.2572631835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	3 Carbamidomethyl (C)	_C(Carbamidomethyl (C))C(Carbamidomethyl (C))FDHDGELVC(Carbamidomethyl (C))_	REV__LAMA1|p.R1475C|1|0.07|ENSG00000101680|chr18:6999957-6999957|G/A|missense_variant	2.92943323627438	0.8718097890272747	3				NaN	NaN	0	NaN	139	2419	2558
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2565	12.806	NaN	1157.4	30	0	501.36	0.143			+	51374	YTKLDLSR	8	41	498.2799755054511	994.5453980777022	2	498.2794494628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YTKLDLSR_	REV__RLF|p.F1759L|1|0.05|ENSG00000117000|chr1:40239977-40239977|T/C|missense_variant	37.15910966729921	0.6739408393984688	3				NaN	NaN	0	NaN	141	2422	2564
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2570	12.822	NaN	2718	30	0	417.26	0.143	+			39042	SSSPGTSVKK	10	42	489.2669358786261	976.5193188240522	2	489.26617431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSSPGTSVKK_	ENSG00000135720|ENST00000258198|DYNC1LI2;nc|ENSG00000135720|O43237-2|DYNC1LI2	46.45678178249821	0.4896490706773647	3				NaN	NaN	0	NaN	143	2425	2569
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2574	12.838	NaN	3899.1	30	0	886.43	0.214	+			16574	HFTHVFVD	8	31	501.24621217644074	1000.4778714196815	2	501.2456970214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HFTHVFVD_	ENSG00000073146|ENST00000262794|MOV10L1;nc|ENSG00000073146|Q9BXT6-2|MOV10L1;nc|ENSG00000073146|Q9BXT6-4|MOV10L1;nc|ENSG00000073146|Q9BXT6-5|MOV10L1	14.664097394203935	0.7913966407026132	3				NaN	NaN	0	NaN	144	2428	2573
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2575	12.842	NaN	1265.4	30	0	242.73	0.106				-1	SENSVNMAAH	10	20	538.2272441490421	1074.4399353648841	2	538.2276000976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_SENSVNM(Oxidation (M))AAH_	ENSG00000149308|ENST00000278612|NPAT;ENST00000530859.1_1_11:108029671-108040846:-|nuORF	14.137123925751023	0.7446123510383054	3				NaN	NaN	0	NaN	145	2428	2573
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2576	12.844	NaN	1254.8	30	0	219.46	0.106			+	-1	SELCVQCK	8	33	512.235107421875	NaN	0	512.235107421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_SELC(Carbamidomethyl (C))VQC(Carbamidomethyl (C))K_	REV__ENSG00000101901|ENST00000394780|ALG13;REV__nc|ENSG00000101901|Q9NP73-3|ALG13;REV__nc|ENSG00000101901|Q9NP73-4|ALG13	19.359975847455235	1.7418937515398478	3				NaN	NaN	0	NaN	146	2428	2573
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2577	12.845	NaN	1433.2	30	0	569.85	0.036				-1	LPMMSTDEE	9	17	542.7101359055524	NaN	0	542.7105712890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Oxidation (M)	_LPM(Oxidation (M))M(Oxidation (M))STDEE_	ENST00000596825.5_2_19:58740539-58741795:+|nuORF;ENST00000599227.5_2_19:58740235-58741795:+|nuORF	7.690282842768113	0.40727630907727536	3				NaN	NaN	0	NaN	147	2428	2573
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2587	12.876	NaN	1841.2	30	0	409.68	0.144	+			6097	AVNKQLHQK	9	43	533.3123044505934	1064.6100559679867	2	533.3123168945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVNKQLHQK_	ENSG00000128944|ENST00000249776|KNSTRN;ENST00000560220.5_1_15:40676698-40685795:+|nuORF;nc|ENSG00000128944|Q9Y448-2|KNSTRN;nc|ENSG00000128944|Q9Y448-3|KNSTRN	112.41091882917199	0.026537921851008135	3				NaN	NaN	0	NaN	151	2434	2586
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2596	12.908	NaN	885.09	30	0	160.99	0.141	+			3483	ASSGALRSK	9	39	438.7487734050458	875.4829938768917	2	438.74810791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASSGALRSK_	ENSG00000067066|ENST00000340126|SP100;nc|ENSG00000067066|P23497-2|SP100;nc|ENSG00000067066|P23497-3|SP100;nc|ENSG00000067066|P23497-5|SP100;nc|ENSG00000067066|P23497-6|SP100;nc|ENSG00000067066|P23497-7|SP100;nc|ENSG00000067066|P23497|SP100;SP100|p.A416T|1|0.67|ENSG00000067066|chr2:230467170-230467170|G/A|missense_variant	42.86426827375447	0.38666266728046506	3				NaN	NaN	0	NaN	154	2440	2595
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2601	12.925	NaN	4969.8	30	0	1207.1	0.144	+			39484	STFGGHKSEK	10	60	539.2701579412194	1076.5257629492387	2	539.2699584960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STFGGHKSEK_	ABL1|p.R785Gfs*3|2|0.3|ENSG00000097007|chr9:130884637-130884637|C/-|frameshift_variant;ENSG00000097007|ENST00000318560|ABL1;nc|ENSG00000097007|P00519-2|ABL1	112.2953585152457	0.0411829880542106	3				NaN	NaN	0	NaN	156	2443	2600
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2607	12.943	NaN	6033.8	30	0	965.33	0.214	+			35459	SASSATQVHK	10	69	508.26219197166785	1014.5098310101357	2	508.2620544433594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SASSATQVHK_	ENST00000361272.8_2_8:17102747-17104366:-|nuORF	150.15188659993407	0.008468567113416427	3				NaN	NaN	0	NaN	159	2446	2606
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2608	12.946	NaN	3082.4	30	0	526.55	0.036			+	23179	KWMEVAILE	9	50	559.7995475782149	NaN	0	559.7998046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KWMEVAILE_	REV__ENSG00000004838|ENST00000231749|ZMYND10;REV__ENST00000478269.5_1_3:50380731-50381380:-|nuORF;REV__nc|ENSG00000004838|O75800-2|ZMYND10	76.7741389293348	0.08243745921263976	3				NaN	NaN	0	NaN	160	2446	2606
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2616	12.964	NaN	4664	30	0	1494.3	0.214			+	-1	EPGWCGEPSC	10	31	561.2048292783115	1120.395105623423	2	561.20458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_EPGWC(Carbamidomethyl (C))GEPSC_	REV__ENSG00000146648|ENST00000275493|EGFR;REV__nc|ENSG00000146648|P00533-3|EGFR;REV__nc|ENSG00000146648|P00533-4|EGFR	10.265252068803164	0.7642865340254049	3				NaN	NaN	0	NaN	165	2449	2615
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2617	12.968	NaN	3877.4	30	0	805.23	0.106			+	-1	MQEDWSGSL	9	40	534.7185730137979	1067.4225930943958	2	534.718505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_M(Oxidation (M))QEDWSGSL_	REV__ENSG00000184792|ENST00000332585|OSBP2;REV__ENST00000496575.1_1_22:31289665-31289989:+|nuORF;REV__nc|ENSG00000184792|Q969R2-2|OSBP2;REV__nc|ENSG00000184792|Q969R2-3|OSBP2;REV__nc|ENSG00000184792|Q969R2-4|OSBP2;REV__nc|ENSG00000184792|Q969R2-5|OSBP2;REV__nc|ENSG00000184792|Q969R2-6|OSBP2	19.996771675451527	0.6112419832031292	3				NaN	NaN	0	NaN	166	2449	2615
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2618	12.97	NaN	3198.2	30	0	937.47	0.106	+			33508	RKNLKMGF	8	25	497.28733915644415	992.5601253796883	2	497.28662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RKNLKMGF_	ENST00000380637.7_1_21:40834409-40883616:+|nuORF	9.47055586587303	0.7831821681235687	3				NaN	NaN	0	NaN	167	2449	2615
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2619	12.972	NaN	4384.6	30	0	560.13	0.036				-1	GAAPCEPGCQC	11	27	546.6973469494587	1091.3801409657174	2	546.6959228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_GAAPC(Carbamidomethyl (C))EPGCQC_	ENSG00000177283|ENST00000374694|FZD8	12.811709888998246	0.8104996705804273	3				NaN	NaN	0	NaN	168	2449	2615
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2630	12.995	NaN	15818	30	0	3053.5	0.214				-1	 	0	57	520.2410798860889	1038.4676068389776	2	520.2412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	176	2452	2629
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2631	12.999	NaN	2188.9	30	0	595.41	0.106	+			5607	AVCGKVKCK	9	50	525.2841186523438	NaN	0	525.2841186523438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_AVC(Carbamidomethyl (C))GKVKC(Carbamidomethyl (C))K_	ENSG00000135317|ENST00000314673|SNX14;ENST00000508980.5_1_6:86270935-86284080:-|nuORF;nc|ENSG00000135317|Q9Y5W7-2|SNX14;nc|ENSG00000135317|Q9Y5W7-3|SNX14;nc|ENSG00000135317|Q9Y5W7-4|SNX14;SNX14|p.F173Lfs*5|3|0.42|ENSG00000135317|chr6:85565362-85565362|A/-|frameshift_variant	76.7741389293348	0.08243745921263976	3				NaN	NaN	0	NaN	177	2452	2629
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2632	13.001	NaN	3405.9	30	0	655.51	0.106			+	-1	CHCRRCGLG	9	47	531.2300415039062	NaN	0	531.2300415039062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_CHCRRC(Carbamidomethyl (C))GLG_	REV__ENST00000368107.1_1_1:159751045-159752046:+|nuORF	19.359975847455235	0.3714571876404798	3				NaN	NaN	0	NaN	178	2452	2629
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2633	13.002	NaN	2716.1	30	0	744.89	0.106				-1	EEEEAYGWM	9	20	580.2142944335938	NaN	0	580.2142944335938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_EEEEAYGWM(Oxidation (M))_	ENSG00000184502|ENST00000329402|GAST	8.231297230196988	0.4072763090772754	3				NaN	NaN	0	NaN	179	2452	2629
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2634	13.004	NaN	2411.8	30	0	361.14	0.106				-1	MMFIKTCAC	9	28	540.2212858493565	1078.428018765513	2	540.2200317382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Oxidation (M)	_M(Oxidation (M))M(Oxidation (M))FIKTCAC_	ENSG00000118523|ENST00000367976|CCN2;nc|ENSG00000118523|P29279-2|CCN2	17.364965105453717	0.6112419832031293	3				NaN	NaN	0	NaN	180	2452	2629
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2635	13.006	NaN	1881.9	30	0	412.39	0.106			+	-1	MNCCPCTLR	9	18	557.2213745117188	NaN	0	557.2213745117188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))NCCPC(Carbamidomethyl (C))TLR_	REV__ENSG00000155827|ENST00000389120|RNF20	15.641811463095205	0.38404136392510424	3				NaN	NaN	0	NaN	181	2452	2629
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2636	13.008	NaN	2339.9	30	0	451.8	0.038				-1	GMFCCCCYC	9	27	602.1666259765625	NaN	0	602.1666259765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	3 Carbamidomethyl (C)	_GMFC(Carbamidomethyl (C))CCC(Carbamidomethyl (C))YC(Carbamidomethyl (C))_	ENST00000494000.1_1_3:172048292-172052928:+|nuORF	8.822329726475273	0.4071219895973803	3				NaN	NaN	0	NaN	182	2452	2629
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2643	13.024	NaN	1849.7	30	0	297.19	0.214	+			40326	STSTTTHVTK	10	47	531.7747795420482	1061.5350061508964	2	531.7750244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STSTTTHVTK_	ENSG00000088367|ENST00000338074|EPB41L1;nc|ENSG00000088367|Q9H4G0-2|EPB41L1;nc|ENSG00000088367|Q9H4G0-3|EPB41L1;nc|ENSG00000088367|Q9H4G0-4|EPB41L1	55.721020083383095	0.4047570224426313	3				NaN	NaN	0	NaN	186	2455	2642
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2644	13.028	NaN	1330.6	30	0	421.48	0.106			+	-1	RSIFRMAR	8	22	526.7932314193299	1051.5719099054597	2	526.7925415039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_RSIFRM(Oxidation (M))AR_	REV__ENSG00000206384|ENST00000358511|COL6A6	16.473147378115264	0.7942579620968672	3				NaN	NaN	0	NaN	187	2455	2642
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2645	13.029	NaN	1003.9	30	0	258.82	0.036			+	31431	QKPGDQWPM	9	21	543.7548217773438	NaN	0	543.7548217773438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QKPGDQWPM_	REV__ENSG00000117400|ENST00000372470|MPL;REV__MPL|p.A444Gfs*39|1|0.21|ENSG00000117400|chr1:43348860-43348861|-/G|frameshift_variant;REV__MPL|p.I330Sfs*39|1|0.41|ENSG00000117400|chr1:43346448-43346448|C/-|frameshift_variant;REV__nc|ENSG00000117400|P40238-2|MPL	10.865556482863946	0.40020666175442315	3				NaN	NaN	0	NaN	188	2455	2642
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2649	13.043	NaN	822.97	30	0	200.99	0.143			+	50307	WSRGAQHR	8	34	499.25611666918854	NaN	0	499.25634765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WSRGAQHR_	REV__ENST00000222345.10_1_19:38698194-38698434:+|nuORF	21.9598887501803	1.7418937515398478	3				NaN	NaN	0	NaN	189	2458	2648
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2655	13.061	NaN	2128	30	0	461.12	0.145			+	28461	NFRFEEDPM	9	28	592.7567377502198	1183.4989225672396	2	592.7572631835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NFRFEEDPM_	REV__ENSG00000182307|ENST00000331434|C8orf33;REV__ENST00000524395.5_1_8:146277890-146279540:+|nuORF;REV__ENST00000530455.5_1_8:146277890-146279540:+|nuORF;REV__ENST00000534350.5_1_8:146279384-146279540:+|nuORF;REV__nc|nan|Q9H7E9-2|C8orf33	13.45404412870281	0.6112419832031293	3				NaN	NaN	0	NaN	192	2461	2654
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2669	13.113	NaN	1827.2	30	0	490.38	0.214	+			42508	TAPGPCFPK	9	39	459.22923911786614	NaN	0	459.2291564941406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAPGPCFPK_	ENST00000602124.1_1_19:58427786-58427942:-|nuORF	37.15910966729921	0.2899585034171616	3				NaN	NaN	0	NaN	197	2470	2668
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2670	13.117	NaN	883.62	30	0	208.32	0.036				-1	MVFETKER	8	21	541.2717566507858	1080.5289603683716	2	541.271728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))MVFETKER_	ENST00000547832.5_1_12:50138256-50138298:+|nuORF	7.690282842768113	0.7803663624056911	3				NaN	NaN	0	NaN	198	2470	2668
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2674	13.131	NaN	2004.9	30	0	290.05	0.214			+	-1	MKCSRDKS	8	48	514.2362541717591	1026.4579554103182	2	514.236572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))KC(Carbamidomethyl (C))SRDKS_	REV__ENSG00000116852|ENST00000461742|KIF21B;REV__nc|ENSG00000116852|O75037-2|KIF21B;REV__nc|ENSG00000116852|O75037-3|KIF21B;REV__nc|ENSG00000116852|O75037|KIF21B	45.9519527083369	0.6193794311207887	3				NaN	NaN	0	NaN	199	2473	2673
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2675	13.135	NaN	940.36	30	0	352.33	0.106	+			36540	SFHVHSGAWV	10	20	563.774169921875	NaN	0	563.774169921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SFHVHSGAWV_	ENSG00000196431|ENST00000354760|CRYBA4	10.265252068803164	0.42010282974921537	3				NaN	NaN	0	NaN	200	2473	2673
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2676	13.137	NaN	1816.2	30	0	278.37	0.106			+	-1	QSNVDMGRCW	10	20	634.7615966796875	NaN	0	634.7615966796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_QSNVDM(Oxidation (M))GRC(Carbamidomethyl (C))W_	REV__ENSG00000176903|ENST00000316836|PNMA1	10.265252068803164	0.42010282974921537	3				NaN	NaN	0	NaN	201	2473	2673
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2677	13.138	NaN	1014.5	30	0	298.85	0.037	+			2531	APWPVSCSTST	11	17	568.2587890625	NaN	0	568.2587890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_APWPVSCSTST_	ENST00000534603.5_1_11:770899-773566:-|nuORF	6.31265097734313	0.456735970842152	3				NaN	NaN	0	NaN	202	2473	2673
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2682	13.153	NaN	1707.5	30	0	259.18	0.142	+			5502	AVAEASKER	9	46	480.75910537504535	959.5036578168907	2	480.7589416503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVAEASKER_	CDC42BPB|p.L928Ffs*26|1|0.05|ENSG00000198752|chr14:102963098-102963099|-/A|frameshift_variant;CDC42BPB|p.N918Tfs*5|1|0.27|ENSG00000198752|chr14:102963129-102963129|T/-|frameshift_variant;CDC42BPB|p.Q1073Rfs*38|2|0.31|ENSG00000198752|chr14:102950558-102950558|G/-|frameshift_variant;ENSG00000198752|ENST00000361246|CDC42BPB	65.46538089061403	0.16805504838372562	3				NaN	NaN	0	NaN	204	2476	2681
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2687	13.169	NaN	3526.6	30	0	371.53	0.141	+			5142	ATSVAAARK	9	46	437.75945745838936	873.5043619835787	2	437.7590637207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSVAAARK_	chr20:45814470-45815390|467|14.73|0.65|4.5|+|ENST00000335046|UBE2C,UBE2C;chr20:45814470-45815854|444|10.08|0.42|4.6|+|ENST00000405520|UBE2C,UBE2C;chr20:45815540-45815854|455|13.48|0.56|4.59|+|ENST00000617055|UBE2C,UBE2C;ENSG00000175063|ENST00000356455|UBE2C;nc|ENSG00000175063|O00762-3|UBE2C;nc|ENSG00000175063|O00762-4|UBE2C	62.107414245175825	0.1960472003779324	3				NaN	NaN	0	NaN	206	2479	2686
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2700	13.207	NaN	1663.4	30	0	521.74	0.214			+	-1	CQLCFLACK	9	32	571.7620849609375	NaN	0	571.7620849609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))QLC(Carbamidomethyl (C))FLACK_	REV__ENST00000473597.1_1_X:18911605-18913336:-|nuORF;REV__ENST00000481718.1_1_X:18913249-18913336:-|nuORF	17.364965105453717	0.37820932774828947	3				NaN	NaN	0	NaN	213	2485	2699
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2701	13.21	NaN	2327.5	30	0	799.41	0.106			+	-1	TGMQMQEPTQ	10	25	583.7421875	NaN	0	583.7421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_TGMQM(Oxidation (M))QEPTQ_	REV__BTNL3|p.Q162Sfs*35|1|0.17|ENSG00000168903|chr5:180997295-180997295|C/-|frameshift_variant;REV__BTNL3|p.V131Wfs*66|1|0.2|ENSG00000168903|chr5:180993152-180993152|G/-|frameshift_variant	14.137123925751023	0.4201028297492154	3				NaN	NaN	0	NaN	214	2485	2699
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2702	13.212	NaN	1617.2	30	0	850.19	0.037	+			47985	VSPPAAAL	8	32	363.2119590975669	NaN	0	363.2128601074219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSPPAAAL_	ENST00000564098.5_1_16:1794388-1794685:+|nuORF	29.841539824830324	1.7418937515398478	3				NaN	NaN	0	NaN	215	2485	2699
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2708	13.228	NaN	8455.6	30	0	2217.6	0.214	+			16849	HPEPGKFY	8	26	487.7407269278421	973.4669009224842	2	487.7404479980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HPEPGKFY_	ENSG00000138081|ENST00000403359|FBXO11;FBXO11|p.D318Kfs*3|1|0.37|ENSG00000138081|chr2:47833050-47833053|TGTC/-|frameshift_variant;FBXO11|p.F332Lfs*13|1|0.41|ENSG00000138081|chr2:47833009-47833009|A/-|frameshift_variant;FBXO11|p.Q220R|1|0.23|ENSG00000138081|chr2:47835930-47835930|T/C|missense_variant;nc|ENSG00000138081|Q86XK2-2|FBXO11;nc|ENSG00000138081|Q86XK2-3|FBXO11;nc|ENSG00000138081|Q86XK2-5|FBXO11;nc|ENSG00000138081|Q86XK2-6|FBXO11	13.775330524044264	0.789990904165365	3				NaN	NaN	0	NaN	218	2488	2707
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2709	13.232	NaN	6402.8	30	0	851.28	0.106	+			39667	STIGETSKK	9	56	475.7612769633924	949.5080009935848	2	475.76104736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STIGETSKK_	ENSG00000100461|ENST00000359890|RBM23;ENST00000554955.5_1_14:23375339-23380602:-|nuORF;ENST00000557667.5_1_14:23373372-23380602:-|nuORF;nc|ENSG00000100461|Q86U06-3|RBM23	80.45461616416974	0.09558281504443908	3				NaN	NaN	0	NaN	219	2488	2707
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2710	13.234	NaN	2027.7	30	0	324.22	0.035			+	-1	QEEGDMAPR	9	27	524.7215116238707	1047.4284703145413	2	524.72021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_QEEGDM(Oxidation (M))APR_	REV__ENST00000463233.1_1_22:50624392-50636456:+|nuORF	15.641811463095205	0.6112419832031292	3				NaN	NaN	0	NaN	220	2488	2707
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2717	13.251	NaN	4136.8	30	0	1786.5	0.214				-1	HPSSQTCCH	9	14	528.7032055965578	1055.3918582599156	2	528.7034301757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_HPSSQTC(Carbamidomethyl (C))CH_	ENST00000313421.11_1_11:60786815-60787121:+|nuORF	8.231297230196988	0.6112419832031293	3				NaN	NaN	0	NaN	224	2491	2716
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2718	13.255	NaN	2992.7	30	0	640.65	0.106			+	31760	QPFRGLKU	8	28	498.72906352416953	NaN	0	498.72882080078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QPFRGLKU_	REV__ENSG00000183291|ENST00000331835|SELENOF;REV__nc|ENSG00000183291|O60613-2|SELENOF	28.2542754592877	1.7418937515398478	3				NaN	NaN	0	NaN	225	2491	2716
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2719	13.257	NaN	3837.3	30	0	887.03	0.106				-1	 	0	27	507.0847351849843	NaN	0	506.71453857421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	226	2491	2716
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2720	13.259	NaN	4923.1	30	0	637.03	0.106			+	-1	QTANEFGLARC	11	34	633.7988780991057	1265.5832032650112	2	633.7987670898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_QTANEFGLARC(Carbamidomethyl (C))_	REV__ENSG00000108679|ENST00000262776|LGALS3BP	23.52269567125451	0.7430573033454468	3				NaN	NaN	0	NaN	227	2491	2716
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2721	13.26	NaN	2864.4	30	0	687.74	0.106			+	-1	CHDICRMS	8	21	547.713623046875	NaN	0	547.713623046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C),Oxidation (M)	_C(Carbamidomethyl (C))HDIC(Carbamidomethyl (C))RM(Oxidation (M))S_	REV__ENST00000392202.7_1_2:209166982-209168937:+|nuORF;REV__ENST00000477200.1_1_2:209167000-209167102:+|nuORF	12.959181472943097	1.7418937515398478	3				NaN	NaN	0	NaN	228	2491	2716
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2722	13.262	NaN	1533.6	30	0	458.36	0.106			+	-1	RMCAHPKC	8	12	509.72314453125	NaN	0	509.72314453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),Oxidation (M)	_RM(Oxidation (M))CAHPKC(Carbamidomethyl (C))_	REV__TET2|p.H994R|1|0.19|ENSG00000168769|chr4:105236923-105236923|A/G|missense_variant	4.316272785109212	1.7418937515398478	3				NaN	NaN	0	NaN	229	2491	2716
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2723	13.264	NaN	2669.2	30	0	515.83	0.037				-1	SSSWCWPCC	9	28	586.7019653320312	NaN	0	586.7019653320312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C)	_SSSWC(Carbamidomethyl (C))WPC(Carbamidomethyl (C))C_	ENST00000448759.1_1_1:43352460-43353038:-|nuORF	7.690282842768113	0.40727630907727536	3				NaN	NaN	0	NaN	230	2491	2716
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2749	13.363	NaN	1453.4	30	0	323.62	0.145				-1	QASLLACEGLA	11	34	566.784745119802	1131.5549373064039	2	566.7849731445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_QASLLAC(Carbamidomethyl (C))EGLA_	ENSG00000139651|ENST00000416904|ZNF740;ZNF740|p.T80Dfs*3|1|0.31|ENSG00000139651|chr12:53185457-53185458|-/A|frameshift_variant	19.1035232394073	0.7810393085260824	3				NaN	NaN	0	NaN	238	2509	2748
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2760	13.41	NaN	2433.7	30	0	712	0.144			+	15069	GTPIGPKGVVK	11	50	351.55361647374093	1051.6390200214228	3	351.55352783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTPIGPKGVVK_	REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-10|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-13|TTN;REV__nc|ENSG00000155657|Q8WZ42-2|TTN;REV__nc|ENSG00000155657|Q8WZ42-3|TTN;REV__nc|ENSG00000155657|Q8WZ42-4|TTN;REV__nc|ENSG00000155657|Q8WZ42-5|TTN;REV__nc|ENSG00000155657|Q8WZ42-7|TTN;REV__nc|ENSG00000155657|Q8WZ42-8|TTN;REV__nc|ENSG00000155657|Q8WZ42-9|TTN;REV__nc|ENSG00000155657|Q8WZ42|TTN;REV__TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;REV__TTN|p.D21555Ifs*6|1|0.33|ENSG00000155657|chr2:178576659-178576659|G/-|frameshift_variant;REV__TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;REV__TTN|p.G22029Efs*22|2|0.13|ENSG00000155657|chr2:178575125-178575125|T/-|frameshift_variant;REV__TTN|p.I24998Nfs*2|1|0.35|ENSG00000155657|chr2:178566216-178566217|-/T|frameshift_variant;REV__TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;REV__TTN|p.K26626Nfs*34|1|0.34|ENSG00000155657|chr2:178561331-178561331|T/-|frameshift_variant;REV__TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;REV__TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;REV__TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant;REV__TTN|p.P22810Hfs*10|1|0.03|ENSG00000155657|chr2:178572780-178572781|-/AAAT|frameshift_variant;REV__TTN|p.V22573Cfs*4|2|0.31|ENSG00000155657|chr2:178573492-178573492|C/-|frameshift_variant;REV__TTN|p.V27442Cfs*4|1|0.05|ENSG00000155657|chr2:178558107-178558108|-/A|frameshift_variant	18.262085536374414	0.7849791996189919	3				NaN	NaN	0	NaN	240	2518	2759
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2765	13.427	NaN	878.61	30	0	109.24	0.142			+	24402	LGAERLRQ	8	46	471.7774911769087	NaN	0	471.777587890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LGAERLRQ_	REV__ENSG00000146540|ENST00000397098|C7orf50	55.50420428727701	1.7418937515398478	3				NaN	NaN	0	NaN	242	2521	2764
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2769	13.442	NaN	3023.9	30	0	550.65	0.142	+			42603	TATAVAHCK	9	53	479.7421591151699	957.4697652971398	2	479.7422790527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_TATAVAHC(Carbamidomethyl (C))K_	chr19:39435705-39435848|468|276.17|0.0|24.72|-|0|RPS16,RPS16|1;ENSG00000105193|ENST00000251453|RPS16;ENST00000601390.1_1_19:39926180-39926535:-|nuORF	134.81075121484326	0.012914550297035062	3				NaN	NaN	0	NaN	243	2524	2768
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2774	13.459	NaN	3074.7	30	0	392.32	0.214	+			6424	AVVSGVHKK	9	50	462.78505927438823	923.5555656155765	2	462.7844543457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVVSGVHKK_	ACTR3B-JMJD1C|1|fusion;ENSG00000171988|ENST00000399262|JMJD1C;nc|ENSG00000171988|Q15652-3|JMJD1C	90.36981228632155	0.0638227155548745	3				NaN	NaN	0	NaN	245	2527	2773
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2775	13.463	NaN	2535.6	30	0	997.52	0.106	+			30417	PWPENFQY	8	18	540.743994017303	1079.4734351014058	2	540.744384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PWPENFQY_	L1PA8_dup4178|chr8:94121319-94127043:-|4.057818296907117|0.2856926403965029|3.83|481.0|265|2|anti-sense	8.231297230196988	0.7812220690224883	3				NaN	NaN	0	NaN	246	2527	2773
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2776	13.464	NaN	3110.2	30	0	398.07	0.036	+			5380	ATYETKESK	9	50	528.764115585636	1055.5136782380719	2	528.76416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATYETKESK_	ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65623404-65625570:-|nuORF;nc|ENSG00000165410|Q9Y281-3|CFL2	120.8684288430529	0.02067403653475984	3				NaN	NaN	0	NaN	247	2527	2773
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2783	13.48	NaN	5432.8	30	0	1177.3	0.214				-1	 	0	56	459.27468567980566	916.5348184264113	2	459.27398681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	251	2530	2782
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2784	13.484	NaN	6667.8	30	0	860.31	0.039	+			21643	KPTLWAPWPGQ	11	84	640.8437119206985	1279.672870908197	2	640.84423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KPTLWAPWPGQ_	chr2:218430878-218432798|98|23.71|0.17|7.11|+|0|VIL1,None|2	65.2775769800794	0.27634548443598095	3				NaN	NaN	0	NaN	252	2530	2782
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2790	13.499	NaN	3634.3	30	0	436.37	0.214	+			20067	KEKEQAKQL	9	58	551.3176037683859	1100.6206546035717	2	551.317138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEKEQAKQL_	ENSG00000110844|ENST00000548825|PRPF40B;ENSG00000196504|ENST00000545856|PRPF40A;nc|ENSG00000110844|Q6NWY9-2|PRPF40B;nc|ENSG00000110844|Q6NWY9-3|PRPF40B;nc|ENSG00000110844|Q6NWY9|PRPF40B;nc|ENSG00000196504|O75400-2|PRPF40A;nc|ENSG00000196504|O75400-3|PRPF40A;nc|ENSG00000196504|O75400|PRPF40A	164.45504665044191	0.003713414289755139	3				NaN	NaN	0	NaN	255	2533	2789
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2791	13.503	NaN	2527.8	30	0	842.49	0.034	+			45937	VARMHEAK	8	34	471.25367224468664	940.4927915561733	2	471.252685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VARMHEAK_	SPG7|p.G313R|1|0.31|ENSG00000197912|chr16:89530758-89530758|G/A|missense_variant	45.9519527083369	0.6193794311207887	3				NaN	NaN	0	NaN	256	2533	2789
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2807	13.555	NaN	1598.2	30	0	270.85	0.142			+	45825	VAISGLRQAG	10	51	486.2852156517019	NaN	0	486.28509521484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VAISGLRQAG_	REV__NT5C1B|p.A541V|1|0.36|ENSG00000185013|chr2:18564007-18564007|G/A|missense_variant	74.25504064058377	0.12773286341944762	3				NaN	NaN	0	NaN	263	2542	2806
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2812	13.571	NaN	3125.7	30	0	318.67	0.143	+			3908	ATARPRPVK	9	39	332.54192608989763	994.603948869893	3	332.5417175292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATARPRPVK_	ENSG00000170892|ENST00000396388|TSEN34	49.44154591367651	0.3095138337212152	3				NaN	NaN	0	NaN	265	2545	2811
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2818	13.588	NaN	1632.5	30	0	343.32	0.214	+			41647	SVQTKTIKK	9	51	516.8245330532542	1031.6345131733083	2	516.823486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVQTKTIKK_	ENSG00000069869|ENST00000435532|NEDD4;ENST00000513957.1_1_15:56216842-56258681:-|nuORF	65.46538089061403	0.16805504838372562	3				NaN	NaN	0	NaN	268	2548	2817
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2819	13.592	NaN	2394.8	30	0	216.35	0.038			+	-1	PKMEIYNKPI	10	50	624.8388642059399	NaN	0	624.8388061523438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_PKM(Oxidation (M))EIYNKPI_	REV__ENSG00000177885|ENST00000316804|GRB2;REV__nc|ENSG00000177885|P62993-2|GRB2	19.1035232394073	0.4201028297492154	3				NaN	NaN	0	NaN	269	2548	2817
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2825	13.607	NaN	1727.6	30	0	316.82	0.214	+			2853	ASANGAAIKK	10	55	465.7717243850771	NaN	0	465.77197265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASANGAAIKK_	ENSG00000129757|ENST00000440480|CDKN1C;nc|ENSG00000129757|P49918|CDKN1C	65.15724298150197	0.19216335879263718	3				NaN	NaN	0	NaN	272	2551	2824
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2826	13.61	NaN	3189.5	30	0	1253.5	0.038	+			32276	QTMAANAQKNK	11	51	602.8095525139531	NaN	0	602.8099365234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QTMAANAQKNK_	ENSG00000162368|ENST00000371873|CMPK1;ENST00000371870.3_1_1:47799617-47838812:+|nuORF;nc|ENSG00000162368|P30085-2|CMPK1;nc|ENSG00000162368|P30085|CMPK1	40.05817265558897	0.3867246477658885	3				NaN	NaN	0	NaN	273	2551	2824
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2845	13.677	NaN	2609.1	30	0	535.29	0.214	+			3367	ASNPVIKKK	9	47	492.81423574909064	983.6139185649813	2	492.81353759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASNPVIKKK_	nc|ENSG00000117650|P51955-4|NEK2	54.776311868738084	0.25715957988447635	3				NaN	NaN	0	NaN	280	2563	2844
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2846	13.68	NaN	1025.7	30	0	129.13	0.034			+	13926	GRQPRARQ	8	30	484.77949299272535	967.5444330522507	2	484.77935791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GRQPRARQ_	REV__ENST00000533444.1_1_8:145150083-145150443:+|nuORF	26.79610172149135	0.7524337208463756	3				NaN	NaN	0	NaN	281	2563	2844
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2875	13.772	NaN	1409.9	30	0	348.52	0.144	+			37919	SPDVNKIRK	9	44	528.8117371085104	1055.6089212838208	2	528.8115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SPDVNKIRK_	ENSG00000155026|ENST00000404406|RSPH10B;ENSG00000169402|ENST00000404077|RSPH10B2	34.172542307311794	0.4838870758800184	3				NaN	NaN	0	NaN	295	2578	2874
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2880	13.789	NaN	1754.9	30	0	510.95	0.214	+			15174	GTSGPHVGK	9	38	420.22234671898656	838.4301405047731	2	420.2216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTSGPHVGK_	ENSG00000111859|ENST00000379446|NEDD9;ENST00000448183.6_1_6:11200558-11306280:-|nuORF;nc|ENSG00000111859|Q14511-2|NEDD9;nc|ENSG00000111859|Q14511-3|NEDD9;NEDD9|p.P245Lfs*3|2|0.37|ENSG00000111859|chr6:11191135-11191135|G/-|frameshift_variant	52.936696900407355	0.27249468807391813	3				NaN	NaN	0	NaN	297	2581	2879
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2881	13.792	NaN	2345.6	30	0	313.48	0.036			+	21180	KKYKYIKK	8	55	549.8531936312654	NaN	0	549.8534545898438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KKYKYIKK_	REV__ENSG00000153815|ENST00000537098|CMIP;REV__nc|ENSG00000153815|Q8IY22-2|CMIP;REV__nc|ENSG00000153815|Q8IY22-3|CMIP	40.77816245573522	1.7418937515398478	3				NaN	NaN	0	NaN	298	2581	2879
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2887	13.808	NaN	1071.1	30	0	157.73	0.214				-1	GLLDFMKK	8	33	484.26947021484375	NaN	0	484.26947021484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_GLLDFM(Oxidation (M))KK_	tr|U7SYX3|U7SYX3_FUSNURibosomal-protein-alanineN-acetyltransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00792PE=4SV=1	40.5726180659479	1.7418937515398478	3				NaN	NaN	0	NaN	301	2584	2886
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2888	13.812	NaN	1830.4	30	0	301.61	0.036			+	17954	IGRDEQPEGP	10	49	549.266357421875	NaN	0	549.266357421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IGRDEQPEGP_	REV__nc|ENSG00000112782|Q9NZA1|CLIC5	44.377184641726394	0.34115073642966565	3				NaN	NaN	0	NaN	302	2584	2886
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2898	13.833	NaN	1945.1	30	0	322.97	0.214			+	-1	MPKHRCIV	8	42	347.5209761802639	1039.5410991409917	3	347.52069091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_MPKHRC(Carbamidomethyl (C))IV_	REV__ENSG00000116014|ENST00000234371|KISS1R	25.450171626174864	0.7628259754767981	3				NaN	NaN	0	NaN	309	2587	2897
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2899	13.837	NaN	1957.8	30	0	222.23	0.106	+			35171	SAIEGTKSAK	10	41	496.2740783691406	NaN	0	496.2740783691406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAIEGTKSAK_	ENSG00000122786|ENST00000361675|CALD1;ENST00000482470.5_1_7:134552484-134644871:+|nuORF;nc|ENSG00000122786|Q05682-2|CALD1;nc|ENSG00000122786|Q05682-3|CALD1;nc|ENSG00000122786|Q05682-4|CALD1;nc|ENSG00000122786|Q05682-5|CALD1;nc|ENSG00000122786|Q05682-6|CALD1	28.081489160057373	0.40797012399963245	3				NaN	NaN	0	NaN	310	2587	2897
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2900	13.839	NaN	4805.1	30	0	705.58	0.106			+	31250	QHLCRSHGWQ	10	47	626.29541015625	NaN	0	626.29541015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QHLCRSHGWQ_	REV__ENST00000379061.8_1_17:26712241-26725107:+|nuORF	26.69291269510374	0.4125295221340092	3				NaN	NaN	0	NaN	311	2587	2897
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2901	13.841	NaN	4176.6	30	0	1357.6	0.04				-1	 	0	35	434.0846606734761	NaN	0	433.7459716796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	312	2587	2897
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2909	13.86	NaN	2109.2	30	0	514.22	0.214				-1	LALCFVVMF	9	26	529.7760009765625	NaN	0	529.7760009765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LALCFVVM(Oxidation (M))F_	ENST00000417811.2_3_7:32660640-32715635:-|nuORF	14.664097394203935	0.38735045005659413	3				NaN	NaN	0	NaN	317	2590	2908
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2910	13.864	NaN	1690.8	30	0	419.71	0.106			+	11209	FHVTYNVA	8	18	475.7405090332031	NaN	0	475.7405090332031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FHVTYNVA_	REV__ENSG00000158683|ENST00000289672|PKD1L1;REV__nc|ENSG00000158683|Q8TDX9-2|PKD1L1;REV__PKD1L1|p.K1780Rfs*33|1|0.36|ENSG00000158683|chr7:47843068-47843068|T/-|frameshift_variant;REV__PKD1L1|p.L2298Cfs*3|1|0.47|ENSG00000158683|chr7:47821148-47821148|A/-|frameshift_variant;REV__PKD1L1|p.R2615Lfs*97|1|0.05|ENSG00000158683|chr7:47803328-47803329|-/TTTATCA|frameshift_variant	8.822329726475273	1.7418937515398478	3				NaN	NaN	0	NaN	318	2590	2908
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2911	13.866	NaN	1889.5	30	0	238.8	0.106	+			49218	VVNDAGRPK	9	42	478.269529371245	NaN	0	478.2697448730469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVNDAGRPK_	ENSG00000109971|ENST00000534624|HSPA8;ENST00000508840.1_1_8:30095113-30095479:+|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;HSPA8|p.K569Dfs*6|1|0.3|ENSG00000109971|chr11:123058302-123058303|TC/-|frameshift_variant;nc|ENSG00000109971|P11142-2|HSPA8	45.97224482568171	0.23445038899310136	3				NaN	NaN	0	NaN	319	2590	2908
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2912	13.868	NaN	1411.4	30	0	315.91	0.034			+	8618	ECVCAPFH	8	19	453.18499755859375	NaN	0	453.18499755859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ECVCAPFH_	REV__ENST00000460265.5_1_5:126112743-126113319:+|nuORF;REV__ENST00000472034.5_1_5:126112854-126140473:+|nuORF;REV__ENST00000492190.5_1_5:126112854-126113319:+|nuORF	9.47055586587303	1.741893751539848	3				NaN	NaN	0	NaN	320	2590	2908
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2918	13.884	NaN	3062.7	30	0	931.81	0.144				-1	GTQIHKVCK	9	57	535.7925710589204	1069.5705891846408	2	535.7930908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GTQIHKVC(Carbamidomethyl (C))K_	ENST00000594085.5_1_19:40854624-40871501:+|nuORF	54.776311868738084	0.25715957988447635	3				NaN	NaN	0	NaN	323	2593	2917
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2925	13.903	NaN	3124.6	30	0	680.04	0.214	+			40168	STQSKVMNK	9	57	511.76863274989296	1021.5227125665859	2	511.76849365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STQSKVMNK_	ENSG00000165113|ENST00000376371|GKAP1;nc|ENSG00000165113|Q5VSY0-2|GKAP1	118.74307786436346	0.02196067127630568	3				NaN	NaN	0	NaN	327	2596	2924
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2926	13.907	NaN	2080.1	30	0	260.8	0.106	+			44568	TTASQTNIKK	10	43	546.3076171875	NaN	0	546.3076171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTASQTNIKK_	ENSG00000225921|ENST00000451315|NOL7;nc|ENSG00000225921|Q9UMY1-2|NOL7;NOL7|p.K238Nfs*16|1|0.31|ENSG00000225921|chr6:13620760-13620760|A/-|frameshift_variant;NOL7|p.N240Mfs*14|1|0.23|ENSG00000225921|chr6:13620769-13620769|A/-|frameshift_variant	63.53385203322761	0.20542021811828953	3				NaN	NaN	0	NaN	328	2596	2924
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2927	13.908	NaN	2819.2	30	0	602.82	0.034			+	3620	ASVTQLLPQ	9	48	478.7740655208113	955.5335781084226	2	478.7745361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASVTQLLPQ_	REV__ENST00000466084.1_1_3:44959495-44960555:-|nuORF	54.776311868738084	0.25715957988447635	3				NaN	NaN	0	NaN	329	2596	2924
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2937	13.932	NaN	1144.6	30	0	347.72	0.142			+	30077	PQLVMRHG	8	23	469.25559777886366	NaN	0	469.25543212890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PQLVMRHG_	REV__ENSG00000174197|ENST00000703841|MGA;REV__MGA|p.D2578Rfs*45|1|0.32|ENSG00000174197|chr15:41762342-41762343|-/A|frameshift_variant;REV__MGA|p.S2228Kfs*5|1|0.33|ENSG00000174197|chr15:41750284-41750285|-/A|frameshift_variant;REV__MGA|p.T1916Qfs*7|1|0.4|ENSG00000174197|chr15:41749350-41749350|A/-|frameshift_variant;REV__nc|ENSG00000174197|Q8IWI9-3|MGA;REV__nc|ENSG00000174197|Q8IWI9|MGA	13.775330524044264	1.7418937515398478	3				NaN	NaN	0	NaN	336	2599	2936
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2947	13.955	NaN	1507.1	30	0	268.11	0.144			+	37772	SLVSYPYKK	9	23	542.8063225008082	NaN	0	542.806396484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLVSYPYKK_	REV__nc|ENSG00000182944|Q01844-4|EWSR1	12.959181472943097	0.3931207604263714	3				NaN	NaN	0	NaN	343	2602	2946
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2953	13.973	NaN	5220.8	30	0	1829.1	0.214	+			34209	RTDTASRLK	9	52	524.2988385791623	1046.5831242251245	2	524.2990112304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTDTASRLK_	ENSG00000054654|ENST00000555002|SYNE2;ENST00000394768.6_2_14:64542710-64692241:+|nuORF;ENST00000554805.6_2_14:64676062-64692241:+|nuORF;ENST00000555022.5_2_14:64671104-64692241:+|nuORF;nc|ENSG00000054654|Q8WXH0-13|SYNE2;nc|ENSG00000054654|Q8WXH0-3|SYNE2;nc|ENSG00000054654|Q8WXH0-4|SYNE2;nc|ENSG00000054654|Q8WXH0-7|SYNE2;nc|ENSG00000054654|Q8WXH0|SYNE2;SYNE2|p.S6651Rfs*83|1|0.29|ENSG00000054654|chr14:64220596-64220597|-/G|frameshift_variant	91.26522074875469	0.06129826844580791	3				NaN	NaN	0	NaN	346	2605	2952
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2954	13.977	NaN	3524.6	30	0	594.72	0.106	+			3772	ATAEQACKEK	10	62	539.7636602800042	1077.5127676268082	2	539.76318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATAEQACKEK_	ENSG00000125844|ENST00000377813|RRBP1;nc|ENSG00000125844|Q9P2E9-3|RRBP1;RRBP1|p.A628Gfs*69|1|0.35|ENSG00000125844|chr20:17621915-17621916|-/T|frameshift_variant	122.93914200107957	0.02317863035582428	3				NaN	NaN	0	NaN	347	2605	2952
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2955	13.978	NaN	1803.2	30	0	548.47	0.106			+	-1	TWMCCTAW	8	21	558.2077877901081	NaN	0	558.2081298828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_TWMC(Carbamidomethyl (C))C(Carbamidomethyl (C))TAW_	REV__ENST00000488442.1_1_22:42526612-42526705:-|nuORF	8.822329726475273	1.7418937515398478	3				NaN	NaN	0	NaN	348	2605	2952
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2956	13.98	NaN	617.09	30	0	97.306	0.034	+			18103	IKVFAHVT	8	28	457.7760314941406	NaN	0	457.7760314941406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IKVFAHVT_	ENST00000229795.7_2_6:36078211-36078337:+|nuORF	20.481830146152948	1.741893751539848	3				NaN	NaN	0	NaN	349	2605	2952
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2961	13.994	NaN	2113.8	30	0	440.83	0.142	+			44549	TTAEGMAKK	9	47	468.74477754453375	935.4750021558675	2	468.7448425292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTAEGMAKK_	ENSG00000184897|ENST00000333762|H1-10	79.71258880314673	0.09879134589249085	3				NaN	NaN	0	NaN	351	2608	2960
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2967	14.012	NaN	975.04	30	0	161.23	0.142	+			12263	GAVKPPPNK	9	35	454.27201361426563	NaN	0	454.2725524902344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GAVKPPPNK_	ENSG00000167674|ENST00000616600|HDGFL2;nc|ENSG00000167674|Q7Z4V5-2|HDGFL2;nc|ENSG00000167674|Q7Z4V5-3|HDGFL2;nc|ENSG00000167674|Q7Z4V5-4|HDGFL2	60.97194046774394	0.14517358171632622	3				NaN	NaN	0	NaN	354	2611	2966
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2979	14.048	NaN	10851	30	0	1375.5	0.214	+			41091	SVINNSHNK	9	75	506.7623990272499	1011.5102451212998	2	506.76239013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVINNSHNK_	ENSG00000121892|ENST00000303538|PDS5A;nc|ENSG00000121892|Q29RF7-3|PDS5A	112.2953585152457	0.026655838328212944	3				NaN	NaN	0	NaN	360	2617	2978
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2980	14.052	NaN	1097.7	30	0	256.99	0.106			+	39972	STMKRPTPT	9	33	509.769845296871	NaN	0	509.77008056640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STMKRPTPT_	REV__ENSG00000116690|ENST00000445192|PRG4;REV__nc|ENSG00000116690|Q92954-2|PRG4;REV__nc|ENSG00000116690|Q92954-3|PRG4;REV__nc|ENSG00000116690|Q92954-4|PRG4;REV__nc|ENSG00000116690|Q92954-5|PRG4;REV__nc|ENSG00000116690|Q92954-6|PRG4	32.75053402867276	0.3122164853807509	3				NaN	NaN	0	NaN	361	2617	2978
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2981	14.054	NaN	969.32	30	0	181.44	0.034	+			21013	KKHLITTQ	8	32	484.7977268259489	NaN	0	484.7977600097656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KKHLITTQ_	ENSG00000244005|ENST00000374092|NFS1;nc|ENSG00000244005|Q9Y697-2|NFS1	29.14955571784316	1.7418937515398478	3				NaN	NaN	0	NaN	362	2617	2978
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2992	14.087	NaN	3168.6	30	0	323.14	0.214	+			45703	VAAKPVATK	9	60	442.7823271630109	883.5501013928218	2	442.7815856933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VAAKPVATK_	COL6A3|p.A2956Lfs*45|1|0.33|ENSG00000163359|chr2:237336234-237336234|C/-|frameshift_variant;COL6A3|p.A2957Lfs*44|1|0.33|ENSG00000163359|chr2:237336232-237336232|A/-|frameshift_variant;COL6A3|p.G3016Vfs*19|1|0.34|ENSG00000163359|chr2:237334810-237334810|G/-|frameshift_variant;ENSG00000163359|ENST00000295550|COL6A3;ENST00000491769.1_1_2:238233419-238250825:-|nuORF;nc|ENSG00000163359|P12111-2|COL6A3;nc|ENSG00000163359|P12111-4|COL6A3	107.00750918261382	0.032051501805654005	3				NaN	NaN	0	NaN	367	2623	2991
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2993	14.091	NaN	3215.8	30	0	545.26	0.106	+			4033	ATDDSKAVCR	10	50	561.7648075012468	1121.5150620692934	2	561.7653198242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_ATDDSKAVC(Carbamidomethyl (C))R_	ENSG00000115758|ENST00000234111|ODC1	68.84614121027924	0.2867470276772903	3				NaN	NaN	0	NaN	368	2623	2991
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2994	14.093	NaN	759.34	30	0	277.14	0.035	+			36987	SINVVRHLG	9	25	332.197975925135	993.572098375605	3	332.1976013183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SINVVRHLG_	ENSG00000021826|ENST00000233072|CPS1;nc|ENSG00000021826|P31327-2|CPS1;nc|ENSG00000021826|P31327-3|CPS1	13.775330524044264	0.6112419832031292	3				NaN	NaN	0	NaN	369	2623	2991
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	2999	14.107	NaN	2086.8	30	0	451.58	0.145			+	-1	ELQSLMDLKP	10	24	595.309814453125	NaN	0	595.309814453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ELQSLM(Oxidation (M))DLKP_	REV__ENSG00000167528|ENST00000547026|ZNF641;REV__nc|ENSG00000167528|Q96N77-2|ZNF641;REV__nc|ENSG00000167528|Q96N77-3|ZNF641;REV__nc|ENSG00000167528|Q96N77|ZNF641	12.206681093483082	0.4201028297492154	3				NaN	NaN	0	NaN	371	2626	2998
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3005	14.125	NaN	1154.6	30	0	237.88	0.214				-1	MFADPHGK	8	25	459.7086377839031	NaN	0	459.7085266113281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))FADPHGK_	CLASP2|p.L1169Ffs*6|1|0.14|ENSG00000163539|chr3:33510729-33510730|-/A|frameshift_variant;CLASP2|p.M744Nfs*4|1|0.19|ENSG00000163539|chr3:33560868-33560869|-/T|frameshift_variant;CLASP2|p.M744Wfs*33|2|0.29|ENSG00000163539|chr3:33560869-33560869|T/-|frameshift_variant;ENSG00000163539|ENST00000682230|CLASP2;nc|ENSG00000163539|O75122-3|CLASP2;nc|ENSG00000163539|O75122|CLASP2	12.959181472943097	1.7418937515398478	3				NaN	NaN	0	NaN	374	2629	3004
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3006	14.129	NaN	1163.7	30	0	294.99	0.106				-1	ATQMRKLT	8	30	322.1784528763409	NaN	0	322.17877197265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_ATQM(Oxidation (M))RKLT_	ENSG00000259207|ENST00000559488|ITGB3;ITGB3|p.G649Efs*20|1|0.3|ENSG00000259207|chr17:47300507-47300507|G/-|frameshift_variant;ITGB3|p.R515Gfs*154|1|0.36|ENSG00000259207|chr17:47292417-47292417|C/-|frameshift_variant;nc|ENSG00000259207|P05106-2|ITGB3;nc|ENSG00000259207|P05106-3|ITGB3	16.473147378115264	1.7418937515398478	3				NaN	NaN	0	NaN	375	2629	3004
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3007	14.131	NaN	1994.2	30	0	274.9	0.036	+			31471	QKYLEYKK	8	40	550.3091531121235	NaN	0	550.3086547851562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QKYLEYKK_	ENSG00000154545|ENST00000471932|MAGED4;ENSG00000187243|ENST00000335504|MAGED4B;ENST00000470594.5_1_X:51805328-51809606:-|nuORF;ENST00000490581.6_1_X:51805127-51807590:-|nuORF;nc|ENSG00000187243|Q96JG8-2|MAGED4	30.503639358989545	1.7418937515398478	3				NaN	NaN	0	NaN	376	2629	3004
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3018	14.164	NaN	3068.7	30	0	497.43	0.214	+			40162	STQQPLTKK	9	58	515.7985251514705	1029.5824973697408	2	515.7985229492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STQQPLTKK_	ENSG00000182511|ENST00000328850|FES;ENST00000464684.5_1_15:91434747-91438785:+|nuORF;ENST00000496379.5_1_15:91433070-91435551:+|nuORF;nc|ENSG00000182511|P07332-2|FES;nc|ENSG00000182511|P07332-3|FES;nc|ENSG00000182511|P07332-4|FES	114.8945686534367	0.024290463251177924	3				NaN	NaN	0	NaN	381	2635	3017
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3019	14.168	NaN	3552.5	30	0	605.64	0.106	+			41087	SVINNGHNQK	10	58	555.7867426879582	1109.5589324427162	2	555.7861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVINNGHNQK_	ENSG00000083642|ENST00000315596|PDS5B;ENST00000498550.5_1_13:33222909-33262824:+|nuORF;nc|ENSG00000083642|Q9NTI5-2|PDS5B;nc|ENSG00000083642|Q9NTI5-3|PDS5B;PDS5B|p.G721Dfs*35|1|0.13|ENSG00000083642|chr13:32732132-32732132|A/-|frameshift_variant;PDS5B|p.K1268Rfs*8|1|0.07|ENSG00000083642|chr13:32770296-32770296|A/-|frameshift_variant;PDS5B|p.K1287Rfs*22|1|0.26|ENSG00000083642|chr13:32770351-32770351|A/-|frameshift_variant;PDS5B|p.K693Qfs*8|1|0.11|ENSG00000083642|chr13:32710054-32710055|-/T|frameshift_variant;PDS5B|p.N1390Cfs*12|1|0.44|ENSG00000083642|chr13:32770750-32770751|AA/-|frameshift_variant;PDS5B|p.S1198Vfs*10|1|0.28|ENSG00000083642|chr13:32764556-32764556|A/-|frameshift_variant	77.53327743719008	0.21577387331637743	3				NaN	NaN	0	NaN	382	2635	3017
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3020	14.17	NaN	1672.7	30	0	384.07	0.106	+			41653	SVQVSVAPAG	10	42	457.7510717010228	913.4875904688456	2	457.75042724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVQVSVAPAG_	ENSG00000066735|ENST00000423312|KIF26A;KIF26A|p.G1145Afs*103|1|0.2|ENSG00000066735|chr14:104176218-104176218|G/-|frameshift_variant;KIF26A|p.L1096Wfs*152|1|0.43|ENSG00000066735|chr14:104176064-104176064|G/-|frameshift_variant;KIF26A|p.P1147Lfs*101|2|0.24|ENSG00000066735|chr14:104176223-104176223|C/-|frameshift_variant;KIF26A|p.R1269Gfs*7|1|0.38|ENSG00000066735|chr14:104176588-104176588|C/-|frameshift_variant;KIF26A|p.V265Wfs*43|1|0.37|ENSG00000066735|chr14:104157805-104157805|C/-|frameshift_variant	42.86426827375447	0.522752283233888	3				NaN	NaN	0	NaN	383	2635	3017
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3021	14.172	NaN	1766.2	30	0	359.19	0.034			+	13153	GGQGGLPVPQ	10	30	455.24084371383253	NaN	0	455.2409362792969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GGQGGLPVPQ_	REV__ZNF609|p.R194Q|1|0.34|ENSG00000180357|chr15:64500000-64500000|G/A|missense_variant	27.882242232435846	0.4086243523356342	3				NaN	NaN	0	NaN	384	2635	3017
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3028	14.19	NaN	2333.8	30	0	344.55	0.214	+			41054	SVIENAKKK	9	54	508.8086800314218	1015.6028071296436	2	508.8080749511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVIENAKKK_	ENSG00000132305|ENST00000410111|IMMT;ENST00000409258.2_1_2:86386442-86398424:-|nuORF;ENST00000474969.5_1_2:86385703-86422514:-|nuORF;ENST00000490238.5_1_2:86385703-86389088:-|nuORF;nc|ENSG00000132305|Q16891-2|IMMT;nc|ENSG00000132305|Q16891-3|IMMT;nc|ENSG00000132305|Q16891-4|IMMT	96.19043198914106	0.047412499214244314	3				NaN	NaN	0	NaN	388	2638	3027
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3029	14.193	NaN	1419.1	30	0	234.14	0.034				-1	AVMGNPKVK	9	37	480.26910400390625	NaN	0	480.26910400390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_AVM(Oxidation (M))GNPKVK_	ENSG00000223609|ENST00000650601|HBD;ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF;HBD|p.A63V|1|0.34|ENSG00000223609|chr11:5234118-5234118|G/A|missense_variant	35.61828744233558	0.29773779453147337	3				NaN	NaN	0	NaN	389	2638	3027
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3036	14.209	NaN	5742	30	0	2098.7	0.143	+			14687	GTIGHVAHGK	10	57	488.7701151140388	975.5256772948776	2	488.7696838378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTIGHVAHGK_	EIF2S3|p.I441Nfs*4|1|0.29|ENSG00000130741|chrX:24073223-24073224|-/A|frameshift_variant;ENSG00000130741|ENST00000253039|EIF2S3;ENSG00000180574|ENST00000538173|EIF2S3B;nc|ENSG00000180574|Q2VIR3-2|EIF2S3B	95.81516180277367	0.09778090853194907	3				NaN	NaN	0	NaN	393	2641	3035
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3041	14.225	NaN	1398	30	0	622.23	0.214			+	30551	QALCASASIH	10	24	500.7490234375	NaN	0	500.7490234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QALCASASIH_	REV__nc|ENSG00000181109|Q8NH57|OR52P1	10.865556482863946	0.4201028297492154	3				NaN	NaN	0	NaN	395	2644	3040
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3042	14.229	NaN	683.19	30	0	268.52	0.106			+	21145	KKTGKLISK	9	30	334.89349365234375	NaN	0	334.89349365234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KKTGKLISK_	REV__ENSG00000187783|ENST00000389583|TMEM72;REV__nc|ENSG00000187783|A0PK05-2|TMEM72;REV__TMEM72|p.L205*|1|0.42|ENSG00000187783|chr10:44934917-44934917|C/-|frameshift_variant;REV__TMEM72|p.P196H|1|0.09|ENSG00000187783|chr10:44934893-44934893|C/A|missense_variant	18.262085536374414	0.37517301184500873	3				NaN	NaN	0	NaN	396	2644	3040
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3043	14.231	NaN	1259	30	0	414.04	0.036			+	51255	YQTKRNIH	8	18	530.2864379882812	NaN	0	530.2864379882812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YQTKRNIH_	REV__ENSG00000151276|ENST00000402939|MAGI1;REV__nc|ENSG00000151276|Q96QZ7-3|MAGI1;REV__nc|ENSG00000151276|Q96QZ7-4|MAGI1;REV__nc|ENSG00000151276|Q96QZ7-5|MAGI1;REV__nc|ENSG00000151276|Q96QZ7-6|MAGI1;REV__nc|ENSG00000151276|Q96QZ7-7|MAGI1;REV__nc|ENSG00000151276|Q96QZ7|MAGI1	17.364965105453717	1.7418937515398478	3				NaN	NaN	0	NaN	397	2644	3040
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3055	14.256	NaN	29822	30	0	8132.8	0.214	+			15385	GTYDAKVKK	9	67	505.28766949958117	1008.5607860659624	2	505.2873229980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTYDAKVKK_	ENSG00000159713|ENST00000393957|TPPP3	115.49404669440601	0.023927554121326553	3				NaN	NaN	0	NaN	406	2647	3054
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3056	14.26	NaN	23633	30	0	7465.4	0.106	+			35220	SAKYKKGVE	9	57	337.1942428460651	1008.5608991383954	3	337.1940002441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAKYKKGVE_	ENST00000547216.1_1_12:57871100-57871594:-|nuORF;ENST00000551000.1_1_12:57871100-57871616:-|nuORF	39.252832667884924	0.4290233611298554	3				NaN	NaN	0	NaN	407	2647	3054
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3057	14.262	NaN	2146.2	30	0	520.53	0.106	+			47217	VMFLFSYIL	9	31	378.2075133365162	1131.6007106097486	3	378.20709228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VMFLFSYIL_	ENSG00000168131|ENST00000303324|OR2B2;OR2B2|p.Y252Mfs*34|1|0.34|ENSG00000168131|chr6:27911566-27911566|A/-|frameshift_variant	21.9598887501803	0.5980208138527809	3				NaN	NaN	0	NaN	408	2647	3054
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3058	14.263	NaN	3472	30	0	1315.6	0.106			+	41898	SVVASGSSFGR	11	27	527.2681588408182	1052.5217647484362	2	527.268310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVVASGSSFGR_	REV__CON__P35908;REV__CON__P35908v2;REV__CON__Q3TTY5;REV__ENSG00000172867|ENST00000309680|KRT2;REV__KRT2|p.E409Gfs*10|1|0.31|ENSG00000172867|chr12:52647752-52647753|-/C|frameshift_variant	14.137123925751023	0.8042936413770803	3				NaN	NaN	0	NaN	409	2647	3054
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3059	14.265	NaN	6423.7	30	0	1280.9	0.106			+	-1	MYMSVTGSVCC	11	29	635.2356184984486	1268.4566840636971	2	635.2359619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C),2 Oxidation (M)	_M(Oxidation (M))YM(Oxidation (M))SVTGSVC(Carbamidomethyl (C))C_	REV__ENST00000530958.5_1_11:108094696-108094846:+|nuORF	10.265252068803164	0.8224230327593429	3				NaN	NaN	0	NaN	410	2647	3054
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3060	14.267	NaN	7172.9	30	0	1528	0.106				-1	MTGMYGDPSQM	11	27	625.2324358202673	1248.4503187073344	2	625.2337036132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Oxidation (M)	_M(Oxidation (M))TGM(Oxidation (M))YGDPSQM_	SEC61A1|p.E142Q|1|0.29|ENSG00000058262|chr3:128060173-128060173|G/C|missense_variant	9.705651100619752	0.8250432705525658	3				NaN	NaN	0	NaN	411	2647	3054
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3061	14.269	NaN	3246	30	0	864.71	0.036			+	-1	PDGYMACMVI	10	22	558.2300177422039	1114.4454825512078	2	558.2304077148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_PDGYM(Oxidation (M))ACMVI_	REV__ENST00000407916.2_1_7:55003624-55004065:+|nuORF	12.959181472943097	0.7505978423513068	3				NaN	NaN	0	NaN	412	2647	3054
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3073	14.295	NaN	6089.6	30	0	2500.3	0.214	+			11625	FQAALRCPQ	9	29	517.2665790975736	1032.5186052619472	2	517.2664794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FQAALRCPQ_	ENST00000488605.1_1_13:50096192-50101394:+|nuORF	24.20275056022122	0.577060078256802	3				NaN	NaN	0	NaN	421	2650	3072
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3074	14.298	NaN	2415.6	30	0	358.4	0.106				-1	CVCVCVCVCV	10	24	593.2323608398438	NaN	0	593.2323608398438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term),2 Carbamidomethyl (C)	_(Acetyl (Protein N-term))CVC(Carbamidomethyl (C))VC(Carbamidomethyl (C))VCVCV_	ENST00000216044.9_1_22:39126956-39127310:+|nuORF;ENST00000216044.9_1_22:39126956-39127310:+|nuORF;ENST00000252445.7_1_19:11664324-11664540:-|nuORF;ENST00000252445.7_1_19:11664324-11664540:-|nuORF;ENST00000252445.7_1_19:11664324-11664540:-|nuORF;ENST00000252445.7_1_19:11664324-11664540:-|nuORF;ENST00000252445.7_1_19:11664367-11664523:-|nuORF;ENST00000252445.7_1_19:11664367-11664523:-|nuORF;ENST00000252445.7_1_19:11664367-11664523:-|nuORF;ENST00000306442.4_1_5:122359405-122359573:-|nuORF;ENST00000324198.10_1_22:26122778-26123027:+|nuORF;ENST00000324198.10_1_22:26122778-26123027:+|nuORF;ENST00000324198.10_1_22:26122778-26123027:+|nuORF;ENST00000336967.7_1_19:54378000-54378504:+|nuORF;ENST00000339276.5_1_1:27190745-27190907:+|nuORF;ENST00000358600.7_1_19:14492051-14492228:+|nuORF;ENST00000358600.7_1_19:14492051-14492228:+|nuORF;ENST00000367993.7_1_1:161183998-161184157:+|nuORF;ENST00000367993.7_1_1:161184008-161184149:+|nuORF;ENST00000371335.4_1_X:119572500-119572653:-|nuORF;ENST00000371335.4_1_X:119572500-119572653:-|nuORF;ENST00000374007.5_2_10:52514578-52514776:+|nuORF;ENST00000374007.5_2_10:52514578-52514776:+|nuORF;ENST00000374007.5_2_10:52514578-52514776:+|nuORF;ENST00000396425.7_1_22:42390756-42390969:+|nuORF;ENST00000396425.7_1_22:42390756-42390969:+|nuORF;ENST00000402506.5_1_7:2566845-2567148:+|nuORF;ENST00000423538.6_1_1:156180712-156180916:+|nuORF;ENST00000423538.6_1_1:156180712-156180916:+|nuORF;ENST00000423538.6_1_1:156180712-156180916:+|nuORF;ENST00000426431.2_1_12:53806697-53806769:+|nuORF;ENST00000433544.1_1_1:94218982-94219231:-|nuORF;ENST00000433544.1_1_1:94218982-94219231:-|nuORF;ENST00000433544.1_1_1:94218982-94219231:-|nuORF;ENST00000437198.6_1_16:14529576-14529846:-|nuORF;ENST00000437198.6_1_16:14529576-14529846:-|nuORF;ENST00000437198.6_1_16:14529576-14529846:-|nuORF;ENST00000437198.6_1_16:14529576-14529846:-|nuORF;ENST00000475375.1_1_13:53010343-53024741:-|nuORF;ENST00000475375.1_1_13:53010343-53024741:-|nuORF;ENST00000485407.1_1_13:39616195-39618420:+|nuORF;ENST00000485407.1_1_13:39616195-39618420:+|nuORF;ENST00000525141.1_11:93211864-93211963:-|nuORF;ENST00000525141.1_11:93211864-93211963:-|nuORF;ENST00000530298.5_1_1:156807654-156845592:+|nuORF;ENST00000530298.5_1_1:156807654-156845592:+|nuORF;ENST00000542192.5_1_9:136335242-136335521:+|nuORF;ENST00000542192.5_1_9:136335242-136335521:+|nuORF;ENST00000544551.5_1_11:110101225-110101387:-|nuORF;ENST00000548357.2_2_16:21397180-21397309:+|nuORF;ENST00000549479.1_1_12:76462365-76462575:-|nuORF;ENST00000549479.1_1_12:76462365-76462575:-|nuORF;ENST00000558090.2_1_15:83513972-83514182:-|nuORF;ENST00000558090.2_1_15:83513972-83514182:-|nuORF;ENST00000561423.2_1_15:101093736-101094444:-|nuORF;ENST00000561423.2_1_15:101093736-101094444:-|nuORF;ENST00000565981.5_1_16:58539993-58546041:+|nuORF;ENST00000565981.5_1_16:58539993-58546041:+|nuORF;ENST00000580796.5_1_17:56603775-56604561:-|nuORF;ENST00000580796.5_1_17:56603775-56604561:-|nuORF;ENST00000583273.5_1_17:56603775-56606703:-|nuORF;ENST00000583273.5_1_17:56603775-56606703:-|nuORF;ENST00000584789.1_1_17:56603775-56609324:-|nuORF;ENST00000584789.1_1_17:56603775-56609324:-|nuORF;ENST00000585170.1_1_17:56603775-56604489:-|nuORF;ENST00000585170.1_1_17:56603775-56604489:-|nuORF;ENST00000586222.1_3_18:13382561-13382669:+|nuORF;REV__ENST00000216044.9_1_22:39126956-39127310:+|nuORF;REV__ENST00000216044.9_1_22:39126956-39127310:+|nuORF;REV__ENST00000252445.7_1_19:11664324-11664540:-|nuORF;REV__ENST00000252445.7_1_19:11664324-11664540:-|nuORF;REV__ENST00000252445.7_1_19:11664324-11664540:-|nuORF;REV__ENST00000252445.7_1_19:11664324-11664540:-|nuORF;REV__ENST00000252445.7_1_19:11664367-11664523:-|nuORF;REV__ENST00000252445.7_1_19:11664367-11664523:-|nuORF;REV__ENST00000252445.7_1_19:11664367-11664523:-|nuORF;REV__ENST00000252445.7_1_19:11664367-11664523:-|nuORF;REV__ENST00000300134.7_1_12:57504946-57505147:-|nuORF;REV__ENST00000324198.10_1_22:26122778-26123027:+|nuORF;REV__ENST00000324198.10_1_22:26122778-26123027:+|nuORF;REV__ENST00000324198.10_1_22:26122778-26123027:+|nuORF;REV__ENST00000329608.10_2_1:110453295-110453415:+|nuORF;REV__ENST00000336967.7_1_19:54378000-54378504:+|nuORF;REV__ENST00000336967.7_1_19:54378320-54378569:+|nuORF;REV__ENST00000339276.5_1_1:27190745-27190907:+|nuORF;REV__ENST00000358600.7_1_19:14492051-14492228:+|nuORF;REV__ENST00000358600.7_1_19:14492051-14492228:+|nuORF;REV__ENST00000367993.7_1_1:161183998-161184157:+|nuORF;REV__ENST00000371335.4_1_X:119572500-119572653:-|nuORF;REV__ENST00000371335.4_1_X:119572500-119572653:-|nuORF;REV__ENST00000374007.5_2_10:52514578-52514776:+|nuORF;REV__ENST00000374007.5_2_10:52514578-52514776:+|nuORF;REV__ENST00000374007.5_2_10:52514578-52514776:+|nuORF;REV__ENST00000374007.5_2_10:52514578-52514776:+|nuORF;REV__ENST00000396425.7_1_22:42390756-42390969:+|nuORF;REV__ENST00000396425.7_1_22:42390756-42390969:+|nuORF;REV__ENST00000423538.6_1_1:156180712-156180916:+|nuORF;REV__ENST00000423538.6_1_1:156180712-156180916:+|nuORF;REV__ENST00000423538.6_1_1:156180712-156180916:+|nuORF;REV__ENST00000426431.2_1_12:53806697-53806769:+|nuORF;REV__ENST00000426431.2_1_12:53806697-53806769:+|nuORF;REV__ENST00000433544.1_1_1:94218982-94219231:-|nuORF;REV__ENST00000433544.1_1_1:94218982-94219231:-|nuORF;REV__ENST00000433544.1_1_1:94218982-94219231:-|nuORF;REV__ENST00000433544.1_1_1:94218982-94219231:-|nuORF;REV__ENST00000437198.6_1_16:14529576-14529846:-|nuORF;REV__ENST00000437198.6_1_16:14529576-14529846:-|nuORF;REV__ENST00000437198.6_1_16:14529576-14529846:-|nuORF;REV__ENST00000437198.6_1_16:14529576-14529846:-|nuORF;REV__ENST00000475375.1_1_13:53010343-53024741:-|nuORF;REV__ENST00000485407.1_1_13:39616195-39618420:+|nuORF;REV__ENST00000485407.1_1_13:39616195-39618420:+|nuORF;REV__ENST00000485407.1_1_13:39616195-39618420:+|nuORF;REV__ENST00000525141.1_11:93211864-93211963:-|nuORF;REV__ENST00000525141.1_11:93211864-93211963:-|nuORF;REV__ENST00000529021.1_1_11:7598511-7677986:+|nuORF;REV__ENST00000530298.5_1_1:156807654-156845592:+|nuORF;REV__ENST00000532926.5_1_11:7598511-7598697:+|nuORF;REV__ENST00000542192.5_1_9:136335242-136335521:+|nuORF;REV__ENST00000548357.2_2_16:21397180-21397309:+|nuORF;REV__ENST00000549479.1_1_12:76462365-76462575:-|nuORF;REV__ENST00000549479.1_1_12:76462365-76462575:-|nuORF;REV__ENST00000549479.1_1_12:76462365-76462575:-|nuORF;REV__ENST00000558057.1_1_15:40400417-40401058:-|nuORF;REV__ENST00000558090.2_1_15:83513972-83514182:-|nuORF;REV__ENST00000558090.2_1_15:83513972-83514182:-|nuORF;REV__ENST00000561423.2_1_15:101093736-101094444:-|nuORF;REV__ENST00000561423.2_1_15:101093736-101094444:-|nuORF;REV__ENST00000561423.2_1_15:101093736-101094444:-|nuORF;REV__ENST00000565981.5_1_16:58539993-58546041:+|nuORF;REV__ENST00000580796.5_1_17:56603775-56604561:-|nuORF;REV__ENST00000580796.5_1_17:56603775-56604561:-|nuORF;REV__ENST00000583273.5_1_17:56603775-56606703:-|nuORF;REV__ENST00000583273.5_1_17:56603775-56606703:-|nuORF;REV__ENST00000584789.1_1_17:56603775-56609324:-|nuORF;REV__ENST00000584789.1_1_17:56603775-56609324:-|nuORF;REV__ENST00000585170.1_1_17:56603775-56604489:-|nuORF;REV__ENST00000585170.1_1_17:56603775-56604489:-|nuORF	7.690282842768113	0.42010282974921537	3				NaN	NaN	0	NaN	422	2650	3072
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3075	14.3	NaN	2107.5	30	0	518.37	0.106				-1	 	0	26	538.2526807404888	537.2454042738888	1	538.2542724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	423	2650	3072
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3076	14.302	NaN	1240.8	30	0	434.99	0.106			+	51429	YTYISMDGI	9	23	531.7453002929688	NaN	0	531.7453002929688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YTYISMDGI_	REV__PCDH17|p.V519M|1|0.34|ENSG00000118946|chr13:57634101-57634101|G/A|missense_variant	12.206847966760668	0.39566704307768535	3				NaN	NaN	0	NaN	424	2650	3072
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3077	14.304	NaN	2155.9	30	0	564.59	0.106			+	-1	FKNCHTEDD	9	23	583.2335815429688	NaN	0	583.2335815429688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_FKNC(Carbamidomethyl (C))HTEDD_	REV__LRP1|p.E2725D|1|0.48|ENSG00000123384|chr12:57194683-57194683|G/T|missense_variant	10.865556482863946	0.40020666175442315	3				NaN	NaN	0	NaN	425	2650	3072
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3078	14.306	NaN	536.58	30	0	93.863	0.033	+			25721	LRRAAHGA	8	27	426.2524108886719	NaN	0	426.2524108886719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LRRAAHGA_	ENST00000458426.5_2_2:208489082-208489976:-|nuORF	29.841539824830324	1.7418937515398478	3				NaN	NaN	0	NaN	426	2650	3072
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3091	14.333	NaN	2318.2	30	0	288.15	0.143	+			15157	GTSEVIHRK	9	46	513.7879692732994	1025.5613856133987	2	513.7881469726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTSEVIHRK_	ENSG00000169375|ENST00000394947|SIN3A	63.53385203322761	0.18415635464017938	3				NaN	NaN	0	NaN	436	2653	3090
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3107	14.378	NaN	1554.9	30	0	354.92	0.214	+			20828	KIGKKSFQ	8	40	468.28810917996327	934.5616654267266	2	468.28717041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KIGKKSFQ_	tr|U7T2I4|U7T2I4_FUSNUMajorfacilitatorsuperfamily(MFS)profiledomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00581PE=4SV=1	66.42927471994793	0.4381325844043345	3				NaN	NaN	0	NaN	446	2659	3106
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3108	14.381	NaN	2032.8	30	0	302.86	0.036	+			34092	RSPWSSSRK	9	55	545.7909312017815	1089.567309470363	2	545.7902221679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RSPWSSSRK_	HTT|p.P2413Hfs*44|1|0.6|ENSG00000197386|chr4:3217944-3217944|C/-|frameshift_variant	77.31757898189308	0.1091473830098891	3				NaN	NaN	0	NaN	447	2659	3106
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3113	14.396	NaN	1345.4	30	0	240.91	0.144			+	36751	SHGSYFSLR	9	36	527.258717601309	NaN	0	527.2589721679688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SHGSYFSLR_	REV__ENSG00000067113|ENST00000307259|PLPP1;REV__ENSG00000141934|ENST00000434325|PLPP2;REV__nc|ENSG00000067113|O14494-2|PLPP1;REV__nc|ENSG00000141934|O43688-2|PLPP2;REV__nc|ENSG00000141934|O43688-3|PLPP2	16.473147378115264	0.38122769658151995	3				NaN	NaN	0	NaN	449	2662	3112
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3117	14.412	NaN	1734.3	30	0	847.57	0.145	+			25654	LQYLEEAPK	9	40	364.19692389321204	1089.5689422798362	3	364.1964416503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LQYLEEAPK_	ENSG00000007255|ENST00000585934|TRAPPC6A;nc|ENSG00000007255|O75865-2|TRAPPC6A	21.9598887501803	0.5980208138527809	3				NaN	NaN	0	NaN	450	2665	3116
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3128	14.447	NaN	2170.4	30	0	323.45	0.144	+			32050	QRTRKSLGR	9	57	551.3348827889612	NaN	0	551.3352661132812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QRTRKSLGR_	ENSG00000197879|ENST00000648651|MYO1C;nc|ENSG00000197879|O00159-2|MYO1C;nc|ENSG00000197879|O00159-3|MYO1C	56.72105179125745	0.16330365735109603	3				NaN	NaN	0	NaN	455	2671	3127
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3136	14.467	NaN	4456.9	30	0	893.65	0.214	+			42606	TATAVAHCK	9	48	451.2317797284982	900.4490065237965	2	451.2313537597656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TATAVAHCK_	chr19:39435705-39435848|468|276.17|0.0|24.72|-|0|RPS16,RPS16|1;ENSG00000105193|ENST00000251453|RPS16;ENST00000601390.1_1_19:39926180-39926535:-|nuORF	122.1759843771914	0.019882474861609503	3				NaN	NaN	0	NaN	460	2674	3135
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3137	14.471	NaN	1758.4	30	0	385.49	0.036				-1	SICEAPRHK	9	47	549.2801779823482	NaN	0	549.2803344726562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SIC(Carbamidomethyl (C))EAPRHK_	CAPN15|p.P214Qfs*73|1|0.3|ENSG00000103326|chr16:547474-547474|C/-|frameshift_variant;CAPN15|p.V945Wfs*29|1|0.18|ENSG00000103326|chr16:552700-552700|G/-|frameshift_variant;ENSG00000103326|ENST00000219611|CAPN15;nc|ENSG00000103326|O75808-2|CAPN15	71.87747018426188	0.0992163553043454	3				NaN	NaN	0	NaN	461	2674	3135
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3146	14.491	NaN	3291.7	30	0	1376.4	0.214	+			35402	SAQPRPMVK	9	44	338.5235748390716	1012.5488951174149	3	338.52325439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAQPRPMVK_	ENST00000400864.3_1_19:55236001-55309429:+|nuORF	31.954861631926434	0.5046124803899898	3				NaN	NaN	0	NaN	467	2677	3145
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3147	14.495	NaN	2766.3	30	0	504.86	0.106	+			33037	REKDTVKKL	9	41	558.8412843852501	1115.6680158373001	2	558.8412475585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_REKDTVKKL_	ENSG00000125844|ENST00000377813|RRBP1;nc|ENSG00000125844|Q9P2E9-3|RRBP1	58.22992032128504	0.22837015374068087	3				NaN	NaN	0	NaN	468	2677	3145
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3148	14.497	NaN	1479.9	30	0	436.69	0.035	+			4267	ATGGDITRNK	10	36	516.7749191530777	1031.5352853729553	2	516.7755126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATGGDITRNK_	ENSG00000172939|ENST00000311806|OXSR1;ENST00000426620.5_1_3:38234779-38271948:+|nuORF	27.047317107675042	0.6589519614906109	3				NaN	NaN	0	NaN	469	2677	3145
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3155	14.514	NaN	852.47	30	0	113.15	0.214			+	13584	GLVGKEEGR	9	38	472.76119193749014	943.5078309417803	2	472.76171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GLVGKEEGR_	REV__ENST00000361556.9_1_1:52195540-52211230:+|nuORF;REV__ENST00000531828.5_2_1:52195540-52195678:+|nuORF	47.657333605630114	0.33044192980041115	3				NaN	NaN	0	NaN	473	2680	3154
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3156	14.518	NaN	2437.7	30	0	382.57	0.037				-1	QVLMEQFMK	9	38	585.2868835203126	1168.559214107425	2	585.2855224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_QVLM(Oxidation (M))EQFMK_	ENST00000582375.1_1_18:9132365-9136405:-|nuORF	39.252832667884924	0.4290233611298554	3				NaN	NaN	0	NaN	474	2680	3154
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3163	14.534	NaN	1247	30	0	233	0.142	+			13662	GNKSTLNLI	9	40	480.2794574018064	958.5443618704128	2	480.2788391113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GNKSTLNLI_	ENST00000475896.5_1_3:100581631-100581769:-|nuORF	27.882242232435846	0.5426732730940306	3				NaN	NaN	0	NaN	478	2683	3162
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3173	14.558	NaN	2995.2	30	0	800.69	0.214	+			42092	SYGVSKGK	8	41	413.2264258201823	NaN	0	413.2265930175781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SYGVSKGK_	ENSG00000153187|ENST00000640218|HNRNPU;nc|ENSG00000153187|Q00839-2|HNRNPU	67.49366992349736	1.7418937515398478	3				NaN	NaN	0	NaN	485	2686	3172
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3174	14.561	NaN	7324.6	30	0	1030.9	0.106	+			22178	KSSQPLASKQE	11	73	601.8222799046315	1201.630006876063	2	602.3246459960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KSSQPLASKQE_	ENSG00000137309|ENST00000311487|HMGA1;nc|ENSG00000137309|P17096-2|HMGA1;nc|ENSG00000137309|P17096-3|HMGA1	78.26377905018397	0.16684720679201295	3				NaN	NaN	0	NaN	486	2686	3172
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3175	14.563	NaN	1298.4	30	0	234.58	0.106			+	30685	QCKRASLA	8	41	438.73956298828125	NaN	0	438.73956298828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QCKRASLA_	REV__ARHGEF10L|p.P650Hfs*34|1|0.39|ENSG00000074964|chr1:17637904-17637904|C/-|frameshift_variant;REV__ENSG00000074964|ENST00000361221|ARHGEF10L;REV__ENST00000469726.5_1_1:17942561-18023872:+|nuORF;REV__nc|ENSG00000074964|Q9HCE6-2|ARHGEF10L;REV__nc|ENSG00000074964|Q9HCE6-3|ARHGEF10L;REV__nc|ENSG00000074964|Q9HCE6-4|ARHGEF10L;REV__nc|ENSG00000074964|Q9HCE6-5|ARHGEF10L	50.0245360154114	1.7418937515398478	3				NaN	NaN	0	NaN	487	2686	3172
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3176	14.565	NaN	1907.6	30	0	337.96	0.035				-1	AGGGGSMGDYM	11	25	509.68572998046875	NaN	0	509.68572998046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_AGGGGSM(Oxidation (M))GDYM_	ENSG00000130402|ENST00000252699|ACTN4;ENST00000588618.5_1_19:39138385-39212431:+|nuORF;nc|ENSG00000130402|O43707-2|ACTN4;nc|ENSG00000130402|O43707-3|ACTN4	19.996771675451527	0.456735970842152	3				NaN	NaN	0	NaN	488	2686	3172
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3188	14.591	NaN	3355.6	30	0	673.79	0.145				-1	KPPQWGCLPSG	11	48	613.8013798642406	1225.5882067952812	2	613.8011474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_KPPQWGC(Carbamidomethyl (C))LPSG_	ENST00000356384.4_1_9:137332080-137332257:+|nuORF	32.81241826257853	0.645615689454792	3				NaN	NaN	0	NaN	497	2689	3187
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3194	14.609	NaN	1383.8	30	0	226.88	0.142			+	-1	FKKTMGIK	8	35	484.7851257324219	NaN	0	484.7851257324219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_FKKTM(Oxidation (M))GIK_	REV__tr|U7T3Q1|U7T3Q1_FUSNUAlcoholdehydrogenaseiron-type/glyceroldehydrogenaseGldAdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00491PE=3SV=1	30.503639358989545	1.7418937515398478	3				NaN	NaN	0	NaN	500	2692	3193
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3201	14.628	NaN	3070.1	30	0	624.18	0.213	+			49250	VVNSPHRQYK	10	50	614.3325866393745	1226.650620345549	2	614.3330688476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVNSPHRQYK_	ENSG00000164933|ENST00000297578|SLC25A32	48.601550744091256	0.46988609897316763	3				NaN	NaN	0	NaN	504	2695	3200
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3202	14.632	NaN	634.91	30	0	290.66	0.035	+			15419	GTYLLGILN	9	25	321.85415982383137	NaN	0	321.8542175292969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTYLLGILN_	ENST00000465804.5_1_3:149236734-149236857:-|nuORF	12.206847966760668	0.39566704307768535	3				NaN	NaN	0	NaN	505	2695	3200
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3207	14.646	NaN	18173	30	0	6544.8	0.214	+			1131	AELSRLHR	8	59	327.85797802838397	980.5521046853519	3	327.857666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AELSRLHR_	ENSG00000090615|ENST00000450791|GOLGA3;nc|ENSG00000090615|Q08378-2|GOLGA3;nc|ENSG00000090615|Q08378-4|GOLGA3	20.481830146152948	0.8005983782650069	3				NaN	NaN	0	NaN	507	2698	3206
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3208	14.65	NaN	1530.1	30	0	451.61	0.106	+			26780	LVRGATLDI	9	42	479.28968119010335	NaN	0	479.2896728515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LVRGATLDI_	ENSG00000166946|ENST00000300213|CCNDBP1;ENST00000563065.5_1_15:43477607-43487036:+|nuORF;ENST00000564630.5_1_15:43478389-43485079:+|nuORF;ENST00000566882.5_1_15:43482236-43485079:+|nuORF;ENST00000568936.1_1_15:43482236-43482350:+|nuORF;ENST00000569745.5_1_15:43477607-43487036:+|nuORF;nc|ENSG00000166946|O95273-2|CCNDBP1	38.80614096846853	0.28164298475537564	3				NaN	NaN	0	NaN	508	2698	3206
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3209	14.652	NaN	1229.2	30	0	326.78	0.033			+	28489	NGPVRSPR	8	40	441.7497049254943	881.4848569177886	2	441.7499694824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NGPVRSPR_	REV__ENST00000340305.9_1_1:9662821-9663067:+|nuORF	38.80614096846853	0.6637206697844082	3				NaN	NaN	0	NaN	509	2698	3206
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3219	14.675	NaN	8101.5	30	0	1335.5	0.214	+			44854	TTTTTHITK	9	63	502.2748975869492	1002.5352422406984	2	502.27447509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTTTTHITK_	ENSG00000079819|ENST00000337057|EPB41L2;ENSG00000082397|ENST00000341928|EPB41L3;ENST00000368126.2_1_6:131179278-131186801:-|nuORF;ENST00000452150.6_1_6:131179278-131188835:-|nuORF;nc|ENSG00000079819|O43491-3|EPB41L2;nc|ENSG00000079819|O43491-4|EPB41L2;nc|ENSG00000082397|Q9Y2J2-2|EPB41L3;nc|ENSG00000082397|Q9Y2J2-4|EPB41L3	117.5257442709337	0.022697614825424036	3				NaN	NaN	0	NaN	516	2701	3218
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3220	14.678	NaN	2171	30	0	323.94	0.106	+			5632	AVDAGGVRK	9	43	436.7512987452356	871.4880445572712	2	436.75103759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVDAGGVRK_	ENSG00000148634|ENST00000373700|HERC4;ENST00000427635.6_1_10:69682690-69747802:-|nuORF;ENST00000480158.1_1_10:69714333-69714887:-|nuORF;nc|ENSG00000148634|Q5GLZ8-3|HERC4;nc|ENSG00000148634|Q5GLZ8-6|HERC4;nc|ENSG00000148634|Q5GLZ8|HERC4	64.20726635412375	0.17854274437659667	3				NaN	NaN	0	NaN	517	2701	3218
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3221	14.68	NaN	2231.8	30	0	555.31	0.037			+	2335	AMRPPFLRH	9	21	562.8120782511522	1123.6096035691044	2	562.8117065429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AMRPPFLRH_	REV__ENSG00000143127|ENST00000369304|ITGA10;REV__ITGA10|p.P422Lfs*50|1|0.39|ENSG00000143127|chr1:145901906-145901906|G/-|frameshift_variant;REV__nc|ENSG00000143127|O75578-3|ITGA10	12.206847966760668	0.6112419832031292	3				NaN	NaN	0	NaN	518	2701	3218
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3230	14.702	NaN	2365.5	30	0	362.26	0.214			+	29820	PKPFESHW	8	23	514.2538348542067	1026.4931167752134	2	514.2539672851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PKPFESHW_	REV__ENSG00000138496|ENST00000682323|PARP9;REV__nc|ENSG00000138496|Q8IXQ6-3|PARP9;REV__nc|ENSG00000138496|Q8IXQ6|PARP9;REV__PARP9|p.T633Pfs*5|2|0.22|ENSG00000138496|chr3:122537047-122537047|T/-|frameshift_variant	16.473147378115264	0.7942579620968672	3				NaN	NaN	0	NaN	524	2704	3229
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3231	14.705	NaN	2674.1	30	0	429.22	0.106	+			5094	ATSNVHMVKK	10	59	557.8057130043665	1113.5968730755328	2	557.8052978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATSNVHMVKK_	ENSG00000197256|ENST00000586659|KANK2;ENST00000590400.1_1_19:11303345-11305238:-|nuORF;KANK2|p.P430Rfs*5|1|0.23|ENSG00000197256|chr19:11178681-11178681|G/-|frameshift_variant;nc|ENSG00000197256|Q63ZY3-2|KANK2;nc|ENSG00000197256|Q63ZY3-3|KANK2	48.18798116849167	0.47369693546262365	3				NaN	NaN	0	NaN	525	2704	3229
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3232	14.707	NaN	1692.4	30	0	653.03	0.035				-1	 	0	34	335.87349964686143	1004.5986695407844	3	335.87322998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	526	2704	3229
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3252	14.766	NaN	1526.6	30	0	224.98	0.144				-1	STCEQIKDK	9	42	554.7696355200392	NaN	0	554.7689208984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_STC(Carbamidomethyl (C))EQIKDK_	ENSG00000158435|ENST00000289382|CNOT11	45.02220120713402	0.24099765136254067	3				NaN	NaN	0	NaN	537	2713	3251
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3258	14.783	NaN	2558	30	0	391.29	0.142	+			39618	STIATSHPK	9	48	471.25642645936733	940.4982999855347	2	471.2560729980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STIATSHPK_	ENSG00000007952|ENST00000372966|NOX1;nc|ENSG00000007952|Q9Y5S8-3|NOX1	96.19043198914106	0.047412499214244314	3				NaN	NaN	0	NaN	540	2716	3257
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3263	14.799	NaN	1534.8	30	0	264.67	0.214				-1	STLTMAVC	8	31	421.19271898383306	NaN	0	421.1927795410156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_STLTM(Oxidation (M))AVC_	CDH5|p.V573M|1|0.16|ENSG00000179776|chr16:66400896-66400896|G/A|missense_variant	15.63621529709179	1.7418937515398478	3				NaN	NaN	0	NaN	542	2719	3262
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3264	14.802	NaN	3367.8	30	0	576.84	0.106			+	7487	DGENLNLGECM	11	50	597.740478515625	NaN	0	597.740478515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DGENLNLGECM_	REV__tr|U7SXE1|U7SXE1_FUSNUAnaerobicribonucleoside-triphosphatereductaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00945PE=4SV=1	41.42661286455405	0.376895999158515	3				NaN	NaN	0	NaN	543	2719	3262
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3265	14.804	NaN	2441.2	30	0	325.59	0.034	+			3935	ATASVVKEK	9	58	466.77435555294664	931.5341581726933	2	466.7735290527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATASVVKEK_	ENSG00000160058|ENST00000455895|BSDC1;ENST00000474414.5_1_1:32849477-32859770:-|nuORF;ENST00000533084.1_1_1:32852298-32860015:-|nuORF;nc|ENSG00000160058|Q9NW68-2|BSDC1;nc|ENSG00000160058|Q9NW68-3|BSDC1;nc|ENSG00000160058|Q9NW68-5|BSDC1;nc|ENSG00000160058|Q9NW68-7|BSDC1;nc|ENSG00000160058|Q9NW68-8|BSDC1	87.69643885390035	0.07135982304947239	3				NaN	NaN	0	NaN	544	2719	3262
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3277	14.83	NaN	2604.5	30	0	434.17	0.214	+			42673	TAYLHQHQK	9	58	563.2936289755183	1124.5727050178366	2	563.2943725585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAYLHQHQK_	ENSG00000152454|ENST00000282308|ZNF256;ENSG00000173480|ENST00000312026|ZNF417;ENSG00000198466|ENST00000339656|ZNF587;ENST00000598928.1_1_19:58452294-58458975:-|nuORF;nc|ENSG00000198466|Q96SQ5-2|ZNF587;ZNF256|p.E544Dfs*7|1|0.08|ENSG00000152454|chr19:57941176-57941177|-/ATGAGTG|frameshift_variant;ZNF256|p.Y603*|1|0.08|ENSG00000152454|chr19:57940999-57941000|AT/-|frameshift_variant;ZNF417|p.R546Kfs*4|1|0.34|ENSG00000173480|chr19:57908641-57908642|-/T|frameshift_variant	44.377184641726394	0.36891676396732553	3				NaN	NaN	0	NaN	553	2722	3276
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3278	14.834	NaN	1517.9	30	0	385.85	0.035			+	29462	PCPQESCKR	9	26	524.23974609375	NaN	0	524.23974609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PCPQESCKR_	REV__ENSG00000136378|ENST00000388820|ADAMTS7;REV__ENST00000566303.5_1_15:79059386-79103601:-|nuORF	14.864876125193954	0.3866709117995958	3				NaN	NaN	0	NaN	554	2722	3276
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3291	14.861	NaN	3383.9	30	0	502.01	0.142			+	33258	RGEVHVRQ	8	52	490.7711537565028	979.5277545798057	2	490.77069091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RGEVHVRQ_	REV__ENSG00000062370|ENST00000354340|ZNF112;REV__nc|ENSG00000062370|Q9UJU3|ZNF112	56.72105179125745	0.5342425954139568	3				NaN	NaN	0	NaN	564	2725	3290
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3301	14.887	NaN	2693.6	30	0	408.32	0.145				-1	MRSLDKEMK	9	62	585.2856615337837	1168.5567701343673	2	585.2860717773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_M(Oxidation (M))RSLDKEM(Oxidation (M))K_	DNAH17|p.D2341Tfs*111|1|0.32|ENSG00000187775|chr17:78486305-78486305|G/-|frameshift_variant;DNAH17|p.G2596Afs*13|1|0.33|ENSG00000187775|chr17:78479600-78479600|G/-|frameshift_variant;DNAH17|p.K2058Qfs*32|1|0.09|ENSG00000187775|chr17:78494691-78494692|-/G|frameshift_variant;DNAH17|p.K3895Nfs*2|1|0.24|ENSG00000187775|chr17:78439210-78439210|T/-|frameshift_variant;DNAH17|p.N4131Tfs*34|2|0.38|ENSG00000187775|chr17:78429136-78429136|G/-|frameshift_variant;DNAH17|p.R1580Gfs*23|1|0.38|ENSG00000187775|chr17:78506785-78506785|G/-|frameshift_variant;ENSG00000187775|ENST00000389840|DNAH17	60.97194046774394	0.20551255781574032	3				NaN	NaN	0	NaN	571	2728	3300
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3310	14.911	NaN	814.13	30	0	200.41	0.142	+			7686	DLHKSLKK	8	35	484.79843638866674	NaN	0	484.7983703613281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DLHKSLKK_	tr|U7SF42|U7SF42_FUSNUSmallribosomalsubunitproteinuS2OS=FusobacteriumnucleatumCTI-5OX=1316586GN=rpsBPE=3SV=1	42.396135135203025	1.7418937515398478	3				NaN	NaN	0	NaN	577	2731	3309
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3318	14.931	NaN	2176.9	30	0	331.33	0.214	+			39190	SSYSQVRNK	9	53	534.7757049558309	1067.5368569784616	2	534.775634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSYSQVRNK_	ENSG00000068878|ENST00000404125|PSME4;nc|ENSG00000068878|Q14997-2|PSME4;nc|ENSG00000068878|Q14997-3|PSME4;PSME4|p.V1190Cfs*2|1|0.15|ENSG00000068878|chr2:53897908-53897909|-/A|frameshift_variant	118.74307786436346	0.02196067127630568	3				NaN	NaN	0	NaN	582	2734	3317
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3319	14.934	NaN	633.35	30	0	59.082	0.034	+			14526	GTDMPAAKK	9	34	459.7388916015625	NaN	0	459.7388916015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTDMPAAKK_	EED|p.H305Qfs*14|1|0.09|ENSG00000074266|chr11:86268500-86268501|-/AGACATAC|frameshift_variant;ENSG00000074266|ENST00000263360|EED;nc|ENSG00000074266|O75530-2|EED;nc|ENSG00000074266|O75530-3|EED	44.116797842482775	0.2472372736944149	3				NaN	NaN	0	NaN	583	2734	3317
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3324	14.949	NaN	6631.6	30	0	2059.6	0.214				-1	 	0	38	504.10625120634205	503.09897473974206	1	505.0865173339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	585	2737	3323
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3325	14.953	NaN	5703.2	30	0	637.98	0.106			+	19317	KAHHQFHMHNW	11	61	736.8398911253123	NaN	0	736.8404541015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KAHHQFHMHNW_	REV__ENSG00000149485|ENST00000350997|FADS1;REV__ENST00000496123.6_1_11:61571226-61578532:-|nuORF;REV__nc|ENSG00000149485|O60427-2|FADS1;REV__nc|ENSG00000149485|O60427|FADS1	34.172542307311794	0.4131234684587831	3				NaN	NaN	0	NaN	586	2737	3323
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3326	14.955	NaN	2029	30	0	148.49	0.106	+			7225	DAKKQSTKL	9	51	509.7986067155713	1017.5826604979426	2	509.7988586425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DAKKQSTKL_	CADPS2|p.N1185Tfs*15|1|0.4|ENSG00000081803|chr7:122345632-122345632|T/-|frameshift_variant;ENSG00000081803|ENST00000449022|CADPS2;nc|ENSG00000081803|Q86UW7-2|CADPS2;nc|ENSG00000081803|Q86UW7-3|CADPS2	60.11826168202944	0.21262886028301267	3				NaN	NaN	0	NaN	587	2737	3323
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3327	14.957	NaN	2256.2	30	0	752.82	0.106	+			3260	ASLLSQLLR	9	39	334.21007740995526	999.6084028300659	3	334.2098693847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASLLSQLLR_	ENSG00000112855|ENST00000230771|HARS2;ENST00000506318.1_1_5:140071164-140071422:+|nuORF;ENST00000513912.1_1_5:140071143-140073330:+|nuORF;nc|ENSG00000112855|P49590-2|HARS2	21.9598887501803	0.5980208138527809	3				NaN	NaN	0	NaN	588	2737	3323
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3328	14.958	NaN	2239.1	30	0	477.57	0.037				-1	MYNSHFMH	8	19	570.7138671875	NaN	0	570.7138671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term),2 Oxidation (M)	_(Acetyl (Protein N-term))M(Oxidation (M))YNSHFM(Oxidation (M))H_	ENST00000222690.10_1_7:44866723-44866750:-|nuORF	12.959181472943097	1.7418937515398478	3				NaN	NaN	0	NaN	589	2737	3323
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3335	14.976	NaN	4222.3	30	0	329.99	0.214	+			6155	AVQEQMRSK	9	68	538.7792826594157	1075.5440123856313	2	538.779541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVQEQMRSK_	ENSG00000197622|ENST00000357235|CDC42SE1	106.88024417677582	0.032181361622142884	3				NaN	NaN	0	NaN	593	2740	3334
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3336	14.98	NaN	2452.9	30	0	620.26	0.036			+	32005	QRKVKWPE	8	62	535.8094033312565	1069.6042537293129	2	535.8097534179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QRKVKWPE_	REV__ENSG00000234444|ENST00000423484|ZNF736;REV__ZNF736|p.F167Lfs*31|1|0.22|ENSG00000234444|chr7:64348360-64348360|T/-|frameshift_variant	40.5726180659479	0.6527593143185008	3				NaN	NaN	0	NaN	594	2740	3334
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3345	15	NaN	4550.5	30	0	611.97	0.214			+	43611	TIMTVTTR	8	62	461.7552649815635	921.4959770299271	2	461.75457763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TIMTVTTR_	REV__ENSG00000086548|ENST00000199764|CEACAM6	58.78195531508484	0.5138399468736706	3				NaN	NaN	0	NaN	600	2743	3344
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3346	15.004	NaN	3934.4	30	0	571.91	0.038	+			43619	TINGHNAEVRK	11	68	619.8334680450046	1237.652383156809	2	619.8344116210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TINGHNAEVRK_	ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;ENST00000495810.1_1_7:26235422-26236427:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1	62.79941183454855	0.2984665184922449	3				NaN	NaN	0	NaN	601	2743	3344
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3356	15.037	NaN	2026.3	30	0	264.72	0.214	+			2749	AREYRILL	8	41	345.210168996281	1032.608677589043	3	345.2098693847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AREYRILL_	ENSG00000119321|ENST00000238256|FKBP15;FKBP15|p.K665Rfs*9|2|0.21|ENSG00000119321|chr9:113178722-113178722|T/-|frameshift_variant;nc|ENSG00000119321|Q5T1M5-2|FKBP15;nc|ENSG00000119321|Q5T1M5-3|FKBP15	42.47446043378293	0.6409579893742323	3				NaN	NaN	0	NaN	605	2749	3355
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3357	15.041	NaN	1084.4	30	0	281.06	0.034	+			26815	LVSSSVHSK	9	23	472.26389980872295	942.5132466842459	2	472.2643737792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LVSSSVHSK_	ENSG00000179604|ENST00000335793|CDC42EP4;nc|ENSG00000179604|Q9H3Q1-2|CDC42EP4	40.77816245573522	0.41113185337114944	3				NaN	NaN	0	NaN	606	2749	3355
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3363	15.056	NaN	3447.9	30	0	332.57	0.143	+			4940	ATQQELRAK	9	56	522.7931941117955	1043.571835290391	2	522.7933959960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATQQELRAK_	ENSG00000133392|ENST00000300036|MYH11;nc|ENSG00000133392|P35749-2|MYH11;nc|ENSG00000133392|P35749-3|MYH11;nc|ENSG00000133392|P35749-4|MYH11	70.8162118820467	0.13725933411854815	3				NaN	NaN	0	NaN	609	2752	3362
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3370	15.076	NaN	3890.1	30	0	500.37	0.214				-1	KQLMTSHGV	9	55	508.7637592459607	NaN	0	508.7632751464844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_KQLM(Oxidation (M))TSHGV_	ENST00000374736.7_1_9:107665941-107690416:-|nuORF	37.15910966729921	0.2899585034171616	3				NaN	NaN	0	NaN	613	2755	3369
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3371	15.08	NaN	1878.9	30	0	264.2	0.036	+			48867	VVDAHVREK	9	41	526.7959669785363	1051.5773810238725	2	526.7954711914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVDAHVREK_	ENSG00000113595|ENST00000231524|TRIM23;ENST00000508808.1_1_5:64902931-64905219:-|nuORF;nc|ENSG00000113595|P36406-2|TRIM23;nc|ENSG00000113595|P36406-3|TRIM23	44.377184641726394	0.36891676396732553	3				NaN	NaN	0	NaN	614	2755	3369
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3380	15.102	NaN	3692.2	30	0	377.89	0.143			+	16021	HATALGYRK	9	52	508.7854452008355	1015.556337468471	2	508.78497314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HATALGYRK_	REV__ENSG00000142197|ENST00000691173|DOP1B;REV__nc|ENSG00000142197|Q9Y3R5-2|DOP1B	53.351449002276354	0.2690372970092375	3				NaN	NaN	0	NaN	620	2758	3379
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3386	15.12	NaN	8329.5	30	0	1260	0.144	+			40379	STTTTTHITK	10	73	545.7911010120768	1089.5676490909534	2	545.7906494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STTTTTHITK_	ENSG00000079819|ENST00000337057|EPB41L2;ENSG00000082397|ENST00000341928|EPB41L3;ENST00000368126.2_1_6:131179278-131186801:-|nuORF;ENST00000452150.6_1_6:131179278-131188835:-|nuORF;nc|ENSG00000079819|O43491-3|EPB41L2;nc|ENSG00000079819|O43491-4|EPB41L2;nc|ENSG00000082397|Q9Y2J2-2|EPB41L3;nc|ENSG00000082397|Q9Y2J2-4|EPB41L3	112.10723106719422	0.0417416748461292	3				NaN	NaN	0	NaN	623	2761	3385
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3394	15.14	NaN	4647.8	30	0	1119.5	0.214	+			25947	LSHTPSIAWC	10	25	557.7706177086344	1113.5266824840687	2	557.7704467773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSHTPSIAWC_	ENST00000268261.8_1_16:8942748-8942910:+|nuORF	16.473147378115264	0.7327422906225664	3				NaN	NaN	0	NaN	628	2764	3393
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3395	15.144	NaN	2572.2	30	0	455.14	0.037	+			16081	HCWVHMLDN	9	31	577.7490831323937	1153.4836133315873	2	577.7482299804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HCWVHMLDN_	SLC22A10|p.R48H|1|0.31|ENSG00000184999|chr11:63290308-63290308|G/A|missense_variant	17.364965105453717	0.6112419832031293	3				NaN	NaN	0	NaN	629	2764	3393
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3401	15.161	NaN	6797.6	30	0	554.83	0.214	+			20984	KKFLEKTND	9	72	561.810562539546	1121.606572145892	2	561.8102416992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KKFLEKTND_	tr|U7SNA9|U7SNA9_FUSNUSignalpeptidaseIOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01773PE=3SV=1	47.657333605630114	0.33044192980041115	3				NaN	NaN	0	NaN	632	2767	3400
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3402	15.164	NaN	2025.5	30	0	690.38	0.106	+			43550	THKYKAFPA	9	43	531.7897919934944	1061.5650310537887	2	531.7894287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_THKYKAFPA_	ENSG00000186472|ENST00000333891|PCLO;nc|ENSG00000186472|Q9Y6V0-6|PCLO;PCLO|p.E1944Sfs*8|1|0.34|ENSG00000186472|chr7:82955124-82955124|T/-|frameshift_variant;PCLO|p.K2442Sfs*2|4|0.29|ENSG00000186472|chr7:82953628-82953628|T/-|frameshift_variant;PCLO|p.K3621Ifs*26|1|0.04|ENSG00000186472|chr7:82949726-82949727|-/CCAGATA|frameshift_variant;PCLO|p.K4306Gfs*8|1|0.04|ENSG00000186472|chr7:82915067-82915070|TTTT/-|frameshift_variant;PCLO|p.M3036Tfs*24|1|0.06|ENSG00000186472|chr7:82951481-82951482|-/G|frameshift_variant;PCLO|p.N4248Kfs*31|1|0.28|ENSG00000186472|chr7:82915242-82915243|-/T|frameshift_variant;PCLO|p.P2408Lfs*36|1|0.44|ENSG00000186472|chr7:82953730-82953730|G/-|frameshift_variant;PCLO|p.Q3062Tfs*25|1|0.2|ENSG00000186472|chr7:82951405-82951406|-/G|frameshift_variant;PCLO|p.T3933Nfs*47|1|0.06|ENSG00000186472|chr7:82916188-82916189|-/T|frameshift_variant;PCLO|p.T5069Qfs*20|1|0.11|ENSG00000186472|chr7:82760722-82760722|T/-|frameshift_variant;PCLO|p.Y3007Lfs*2|1|0.28|ENSG00000186472|chr7:82951935-82951936|-/A|frameshift_variant	45.9519527083369	0.35044536499095585	3				NaN	NaN	0	NaN	633	2767	3400
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3403	15.166	NaN	785.31	30	0	123.55	0.106			+	-1	LSLAHCRPA	9	28	512.7721557617188	NaN	0	512.7721557617188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LSLAHC(Carbamidomethyl (C))RPA_	REV__ENST00000543155.5_1_12:6840383-6840503:+|nuORF	17.364965105453717	0.37820932774828947	3				NaN	NaN	0	NaN	634	2767	3400
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3404	15.168	NaN	993.41	30	0	152.65	0.034	+			41817	SVSSPVKSK	9	37	459.7667207488491	917.5188885644982	2	460.2671813964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVSSPVKSK_	ENSG00000174197|ENST00000703841|MGA;MGA|p.D2578Rfs*45|1|0.32|ENSG00000174197|chr15:41762342-41762343|-/A|frameshift_variant;MGA|p.E1249Rfs*25|2|0.28|ENSG00000174197|chr15:41729243-41729244|-/A|frameshift_variant;MGA|p.E1249Rfs*42|1|0.17|ENSG00000174197|chr15:41729244-41729244|A/-|frameshift_variant;MGA|p.H151Pfs*66|1|0.03|ENSG00000174197|chr15:41669345-41669346|-/CA|frameshift_variant;MGA|p.H151Vfs*67|1|0.05|ENSG00000174197|chr15:41669343-41669344|-/TGTTA|frameshift_variant;MGA|p.L1297Wfs*39|1|0.3|ENSG00000174197|chr15:41734566-41734566|C/-|frameshift_variant;MGA|p.N416Vfs*7|1|0.13|ENSG00000174197|chr15:41696254-41696257|CAAA/-|frameshift_variant;MGA|p.R155Efs*24|1|0.31|ENSG00000174197|chr15:41669352-41669353|-/G|frameshift_variant;MGA|p.R614Efs*7|1|0.35|ENSG00000174197|chr15:41696846-41696846|A/-|frameshift_variant;MGA|p.S2228Kfs*5|1|0.33|ENSG00000174197|chr15:41750284-41750285|-/A|frameshift_variant;MGA|p.T1916Qfs*7|1|0.4|ENSG00000174197|chr15:41749350-41749350|A/-|frameshift_variant;nc|ENSG00000174197|Q8IWI9-3|MGA;nc|ENSG00000174197|Q8IWI9|MGA	29.170058357718403	0.5306379469863586	3				NaN	NaN	0	NaN	635	2767	3400
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3410	15.183	NaN	1124.2	30	0	159.49	0.215	+			20674	KGMTAKDSK	9	44	483.2579345703125	NaN	0	483.2579345703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KGMTAKDSK_	AHNAK2|p.D4448Gfs*6|1|0.2|ENSG00000185567|chr14:104942108-104942109|-/C|frameshift_variant;AHNAK2|p.E5149Gfs*8|1|0.32|ENSG00000185567|chr14:104940005-104940006|-/C|frameshift_variant;AHNAK2|p.E5446Gfs*7|1|0.32|ENSG00000185567|chr14:104939114-104939115|-/C|frameshift_variant;AHNAK2|p.L4206Cfs*19|1|0.12|ENSG00000185567|chr14:104942835-104942835|G/-|frameshift_variant;ENSG00000185567|ENST00000333244|AHNAK2;nc|ENSG00000185567|Q8IVF2-3|AHNAK2	32.81241826257853	0.3119040447479903	3				NaN	NaN	0	NaN	638	2770	3409
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3411	15.187	NaN	2303.6	30	0	413.16	0.036	+			44591	TTCSKVFKK	9	56	549.8027323575527	1097.5909117819053	2	549.8040161132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_TTC(Carbamidomethyl (C))SKVFKK_	ENSG00000167625|ENST00000301215|ZNF526	52.936696900407355	0.27249468807391813	3				NaN	NaN	0	NaN	639	2770	3409
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3419	15.207	NaN	2586.3	30	0	592.38	0.145	+			30233	PSSSSSLQKSR	11	31	582.3055419921875	NaN	0	582.3055419921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PSSSSSLQKSR_	ENSG00000079387|ENST00000549518|SENP1;ENST00000547181.5_1_12:48482540-48495255:-|nuORF;ENST00000551592.5_1_12:48474253-48490186:-|nuORF;nc|ENSG00000079387|Q9P0U3-2|SENP1	16.71738777980365	0.456735970842152	3				NaN	NaN	0	NaN	644	2773	3418
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3434	15.241	NaN	37544	30	0	9968.9	0.214	+			1685	AGTATLIRAQ	10	75	334.5296971526702	1000.5672620582106	3	334.529541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AGTATLIRAQ_	ENST00000418572.6_1_12:56750323-56753874:-|nuORF;ENST00000556140.5_1_12:56748997-56753873:-|nuORF;ENST00000557417.5_3_12:56748997-56753873:-|nuORF	68.84614121027924	0.2867470276772903	3				NaN	NaN	0	NaN	656	2776	3433
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3435	15.244	NaN	12510	30	0	4222.6	0.106				-1	 	0	50	513.2697639941327	1024.5249750550654	2	513.2696533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	657	2776	3433
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3436	15.246	NaN	11728	30	0	2536.4	0.106	+			7371	DDNEGVCDLFD	11	23	621.2353017668756	1240.4560506005512	2	621.2366333007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DDNEGVCDLFD_	ENSG00000133740|ENST00000416274|E2F5;nc|ENSG00000133740|Q15329-2|E2F5;nc|ENSG00000133740|Q15329-3|E2F5	9.182911543092327	0.8274909109651483	3				NaN	NaN	0	NaN	658	2776	3433
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3437	15.248	NaN	10208	30	0	5117.6	0.106				-1	CYEKCYNK	8	39	554.2332476080219	1106.4519422828437	2	554.2333374023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_C(Carbamidomethyl (C))YEKCYNK_	ENSG00000186716|ENST00000305877|BCR;ENST00000419722.6_1_22:23634729-23652357:+|nuORF;ENST00000471452.1_1_22:23637243-23644890:+|nuORF	23.04248740728303	0.7814162927298575	3				NaN	NaN	0	NaN	659	2776	3433
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3438	15.25	NaN	8890.7	30	0	6023.4	0.106				-1	GQPVLIGGTMG	11	35	523.2724702994818	1044.5303876657636	2	523.2719116210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_GQPVLIGGTM(Oxidation (M))G_	ENSG00000100220|ENST00000216038|RTCB	19.1035232394073	0.7810393085260824	3				NaN	NaN	0	NaN	660	2776	3433
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3439	15.252	NaN	11047	30	0	2921.2	0.037			+	-1	NRMYHEHY	8	27	583.2457746668853	1164.4769964005704	2	583.245849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_NRM(Oxidation (M))YHEHY_	REV__ENSG00000156959|ENST00000287585|LHFPL4	12.959181472943097	0.7887000251064199	3				NaN	NaN	0	NaN	661	2776	3433
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3450	15.277	NaN	3884.1	30	0	1219.5	0.214			+	-1	QVHCGWNGTS	10	22	573.2437165798452	1144.4728802264904	2	573.2435913085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_QVHC(Carbamidomethyl (C))GWNGTS_	REV__ADGRA3|p.L367Sfs*98|1|0.04|ENSG00000152990|chr4:22436621-22436627|CCTGCCA/-|frameshift_variant;REV__ENSG00000152990|ENST00000334304|ADGRA3;REV__nc|ENSG00000152990|Q8IWK6-2|ADGRA3;REV__nc|ENSG00000152990|Q8IWK6-3|ADGRA3;REV__nc|ENSG00000152990|Q8IWK6-4|ADGRA3	9.182911543092327	0.7697862422657429	3				NaN	NaN	0	NaN	669	2779	3449
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3451	15.28	NaN	2402.3	30	0	1511	0.106			+	2056	ALAGSVGPPG	10	28	413.22722319215865	824.4398934511173	2	413.2266540527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ALAGSVGPPG_	REV__ENSG00000065618|ENST00000648076|COL17A1;REV__nc|ENSG00000065618|Q9UMD9-2|COL17A1	24.20275056022122	0.6821818413321409	3				NaN	NaN	0	NaN	670	2779	3449
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3452	15.283	NaN	2829.2	30	0	779.29	0.106	+			10130	ESQEGDECVK	10	25	562.2308959960938	NaN	0	562.2308959960938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ESQEGDECVK_	ENSG00000163092|ENST00000409195|XIRP2;nc|ENSG00000163092|A4UGR9-2|XIRP2;nc|ENSG00000163092|A4UGR9-3|XIRP2;nc|ENSG00000163092|A4UGR9|XIRP2;XIRP2|p.E1445Dfs*2|1|0.27|ENSG00000163092|chr2:167246249-167246262|TGAAAGAGAGATTT/-|frameshift_variant;XIRP2|p.F1104Lfs*11|1|0.09|ENSG00000163092|chr2:167245228-167245229|-/ATCTTATCAATTGG|frameshift_variant;XIRP2|p.N2647Ifs*6|2|0.26|ENSG00000163092|chr2:167249851-167249851|A/-|frameshift_variant;XIRP2|p.R1906Nfs*2|1|0.48|ENSG00000163092|chr2:167247632-167247635|CAGA/-|frameshift_variant;XIRP2|p.T1263A|1|0.31|ENSG00000163092|chr2:167245704-167245704|A/G|missense_variant	14.864876125193954	0.4201028297492154	3				NaN	NaN	0	NaN	671	2779	3449
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3453	15.284	NaN	7219.5	30	0	1252.5	0.106				-1	NCMDIDECECN	11	24	681.2120971679688	NaN	0	681.2120971679688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_NC(Carbamidomethyl (C))M(Oxidation (M))DIDECECN_	FBN2|p.R1164C|1|0.27|ENSG00000138829|chr5:128338105-128338105|G/A|missense_variant	8.235088202721068	0.456735970842152	3				NaN	NaN	0	NaN	672	2779	3449
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3454	15.286	NaN	4162.7	30	0	985.39	0.106			+	-1	SMDCWGVSTMM	11	22	632.2281494140625	NaN	0	632.2281494140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_SMDCWGVSTM(Oxidation (M))M_	REV__ENST00000366334.3_1_11:73819029-73820255:-|nuORF	9.705651100619752	0.456735970842152	3				NaN	NaN	0	NaN	673	2779	3449
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3455	15.288	NaN	2147	30	0	482.6	0.106			+	-1	FCSFASWEC	9	20	568.7106323242188	NaN	0	568.7106323242188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_FC(Carbamidomethyl (C))SFASWEC_	REV__ENSG00000138684|ENST00000648588|IL21;REV__nc|ENSG00000138684|Q9HBE4-2|IL21	7.193352174278301	0.40727630907727536	3				NaN	NaN	0	NaN	674	2779	3449
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3456	15.29	NaN	4258.2	30	0	1050.8	0.039				-1	QEMDMGFYSC	10	21	642.2213745117188	NaN	0	642.2213745117188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C),Oxidation (M)	_QEMDM(Oxidation (M))GFYSC(Carbamidomethyl (C))_	ENSG00000154134|ENST00000397801|ROBO3;nc|ENSG00000154134|Q96MS0-2|ROBO3;ROBO3|p.D1059Tfs*9|1|0.29|ENSG00000154134|chr11:124878121-124878121|G/-|frameshift_variant	10.265252068803164	0.42010282974921537	3				NaN	NaN	0	NaN	675	2779	3449
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3467	15.316	NaN	8736.9	30	0	1488.4	0.214	+			14335	GSYVTHETK	9	65	511.25129704037766	1020.4880411475554	2	511.25115966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSYVTHETK_	ENSG00000088986|ENST00000242577|DYNLL1;ENSG00000264364|ENST00000579991|DYNLL2;ENST00000552316.1_1_12:120935833-120936010:+|nuORF	123.20810148215591	0.019257656778428764	3				NaN	NaN	0	NaN	683	2782	3466
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3468	15.32	NaN	4698.3	30	0	574.99	0.106	+			40496	STYGVTKGK	9	53	470.7588485768944	939.5031442205889	2	470.7584228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STYGVTKGK_	ENSG00000214753|ENST00000301785|HNRNPUL2	104.0567914643314	0.03506238181059741	3				NaN	NaN	0	NaN	684	2782	3466
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3469	15.322	NaN	9500.5	30	0	1662.2	0.106	+			41331	SVLSGGKAK	9	56	423.75606169526634	845.4975704573327	2	423.755615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVLSGGKAK_	ENSG00000130429|ENST00000646101|ARPC1B;ENST00000491294.1_1_7:98988810-98991817:+|nuORF	112.41091882917199	0.026537921851008135	3				NaN	NaN	0	NaN	685	2782	3466
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3470	15.324	NaN	3094.4	30	0	645.36	0.106	+			5171	ATTEYVQKK	9	51	534.2904164171016	1066.566279901003	2	534.2907104492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATTEYVQKK_	ENSG00000130957|ENST00000375337|FBP2	54.776311868738084	0.25715957988447635	3				NaN	NaN	0	NaN	686	2782	3466
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3471	15.325	NaN	1026.6	30	0	183.96	0.034			+	9380	EKDTLVEM	8	21	482.73736572265625	NaN	0	482.73736572265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EKDTLVEM_	REV__ENSG00000109079|ENST00000226225|TNFAIP1	25.450171626174864	1.7418937515398478	3				NaN	NaN	0	NaN	687	2782	3466
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3484	15.353	NaN	1411.8	30	0	232.21	0.145	+			45952	VASLHLPSFY	10	37	567.3033447265625	NaN	0	567.3033447265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VASLHLPSFY_	AHCYL1|p.D501Y|1|0.33|ENSG00000168710|chr1:110020766-110020766|G/T|missense_variant	20.83715455343099	0.4201028297492154	3				NaN	NaN	0	NaN	697	2785	3483
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3503	15.401	NaN	3010.7	30	0	625.14	0.214				-1	KMLADDAEAGA	11	53	554.2546324975847	1106.4947120619693	2	554.2542724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_KM(Oxidation (M))LADDAEAGA_	ENSG00000130749|ENST00000253048|ZC3H4;ZC3H4|p.G1158Afs*102|1|0.26|ENSG00000130749|chr19:47066795-47066795|C/-|frameshift_variant;ZC3H4|p.V998Cfs*146|1|0.21|ENSG00000130749|chr19:47067277-47067277|G/-|frameshift_variant;ZC3H4|p.V998Rfs*47|1|0.27|ENSG00000130749|chr19:47067276-47067277|-/G|frameshift_variant	41.42661286455405	0.5384226294179143	3				NaN	NaN	0	NaN	710	2791	3502
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3504	15.405	NaN	1520.6	30	0	239.76	0.034	+			38217	SQGPISKPK	9	38	471.27448914325885	940.5344253533177	2	471.2745056152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SQGPISKPK_	BRD2|p.G595Vfs*6|1|0.59|ENSG00000204256|chr6:32978327-32978327|G/-|frameshift_variant;ENSG00000204256|ENST00000374825|BRD2;ENST00000463639.1_1_6:32945329-32946166:+|nuORF;nc|ENSG00000204256|P25440-2|BRD2;nc|ENSG00000204256|P25440-3|BRD2;nc|ENSG00000204256|P25440-4|BRD2	29.170058357718403	0.5306379469863586	3				NaN	NaN	0	NaN	711	2791	3502
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3514	15.427	NaN	1229.4	30	0	140.98	0.214	+			13677	GPEKLSEKFQ	10	39	388.2086486816406	NaN	0	388.2086486816406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GPEKLSEKFQ_	EFNA1|p.R110C|1|0.18|ENSG00000169242|chr1:155131574-155131574|C/T|missense_variant;ENSG00000169242|ENST00000368407|EFNA1;ENST00000469878.5_1_1:155100369-155106166:+|nuORF;ENST00000474413.5_1_1:155102304-155106540:+|nuORF;ENST00000497282.1_1_1:155103761-155106540:+|nuORF;nc|ENSG00000169242|P20827-2|EFNA1	32.75053402867276	0.3926392905881664	3				NaN	NaN	0	NaN	718	2794	3513
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3515	15.431	NaN	1231.9	30	0	289.45	0.106	+			38546	SSEPVVTM	8	18	425.20545333519505	NaN	0	425.2051696777344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSEPVVTM_	ENSG00000159140|ENST00000356577|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-4|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-6|SON;nc|ENSG00000159140|P18583-7|SON;nc|ENSG00000159140|P18583-8|SON;nc|ENSG00000159140|P18583-9|SON	13.775330524044264	1.7418937515398478	3				NaN	NaN	0	NaN	719	2794	3513
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3516	15.433	NaN	5313.9	30	0	968.59	0.106	+			6238	AVSEGTKAVTK	11	65	545.8090692670746	1089.6035856009491	2	545.8079833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVSEGTKAVTK_	ENSG00000124635|ENST00000339812|H2BC11;ENSG00000146047|ENST00000274764|H2BC1;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000196890|ENST00000693095|H2BC26;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000369385.5_1_1:149814898-149814982:+|nuORF;ENST00000436555.1_1_1:228651916-228652012:-|nuORF;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;nc|ENSG00000203814|Q5QNW6-2|H2BC18;nc|ENSG00000285480|A0A2R8Y619|H2BK1	125.68205650279488	0.009258456973060042	3				NaN	NaN	0	NaN	720	2794	3513
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3517	15.434	NaN	1787	30	0	659.85	0.106				-1	MLAWDPGSCP	10	23	575.239013671875	NaN	0	575.239013671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))LAWDPGSC(Carbamidomethyl (C))P_	ENST00000539416.5_1_9:127054798-127064323:+|nuORF	10.865556482863946	0.4201028297492154	3				NaN	NaN	0	NaN	721	2794	3513
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3518	15.436	NaN	1837.3	30	0	297.22	0.037				-1	CWPCLHQW	8	25	565.2411499023438	NaN	0	565.2411499023438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_CWPC(Carbamidomethyl (C))LHQW_	ENSG00000138942|ENST00000326132|RNF185;ENSG00000204308|ENST00000375094|RNF5;ENST00000487940.1_1_6:32146222-32147541:+|nuORF	10.184766708764876	1.7418937515398478	3				NaN	NaN	0	NaN	722	2794	3513
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3527	15.456	NaN	4117.4	30	0	990.89	0.214	+			13100	GGAESHTFK	9	51	467.22512282817814	932.4356927231563	2	467.224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GGAESHTFK_	ENSG00000213145|ENST00000392531|CRIP1;ENST00000460900.1_1_14:105954779-105954845:+|nuORF;ENST00000496700.5_1_14:105954601-105954845:+|nuORF	107.00750918261382	0.032051501805654005	3				NaN	NaN	0	NaN	728	2797	3526
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3528	15.46	NaN	4480.2	30	0	1775.3	0.106				-1	AWCRRHKT	8	30	557.7882537049104	1113.5619544766207	2	557.7879028320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_AWC(Carbamidomethyl (C))RRHKT_	CLCN4|p.R360H|1|0.5|ENSG00000073464|chrX:10208280-10208280|G/A|missense_variant	18.324413293986947	0.7971860551947066	3				NaN	NaN	0	NaN	729	2797	3526
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3529	15.462	NaN	3254.2	30	0	992.02	0.038				-1	MPIDCELSSW	10	19	598.7511252382106	1195.4876975432212	2	598.7510375976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))PIDCELSSW_	C8B|p.K161Nfs*19|1|0.34|ENSG00000021852|chr1:56954736-56954736|T/-|frameshift_variant;ENSG00000021852|ENST00000371237|C8B	6.735540347417125	0.7822220951348577	3				NaN	NaN	0	NaN	730	2797	3526
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3541	15.487	NaN	4134.9	30	0	1092.6	0.214			+	20635	KGGKAFQHFD	10	32	567.7905883789062	NaN	0	567.7905883789062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KGGKAFQHFD_	REV__ENSG00000078269|ENST00000355585|SYNJ2;REV__nc|ENSG00000078269|O15056-2|SYNJ2;REV__nc|ENSG00000078269|O15056-3|SYNJ2;REV__SYNJ2|p.E371Rfs*14|2|0.28|ENSG00000078269|chr6:158062144-158062144|G/-|frameshift_variant;REV__SYNJ2|p.L1226Tfs*32|1|0.22|ENSG00000078269|chr6:158093029-158093030|-/C|frameshift_variant;REV__SYNJ2|p.P1225Hfs*19|1|0.23|ENSG00000078269|chr6:158093030-158093030|C/-|frameshift_variant	29.170058357718403	0.40439580130713204	3				NaN	NaN	0	NaN	739	2800	3540
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3542	15.491	NaN	1289.9	30	0	220.7	0.106	+			47798	VSIGDPKKK	9	36	486.29789914123324	970.5812453492665	2	486.297607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSIGDPKKK_	ENSG00000180370|ENST00000327134|PAK2;ENST00000556425.2_1_15:21937379-21938108:-|nuORF;PAK2|p.R488Gfs*13|1|0.32|ENSG00000180370|chr3:196827302-196827302|A/-|frameshift_variant;PAK2|p.S330Hfs*6|1|0.39|ENSG00000180370|chr3:196814497-196814497|G/-|frameshift_variant;PAK2|p.S371Vfs*67|1|0.31|ENSG00000180370|chr3:196818111-196818111|A/-|frameshift_variant	49.536043120802724	0.308405419312776	3				NaN	NaN	0	NaN	740	2800	3540
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3543	15.493	NaN	2669.1	30	0	446.99	0.106	+			43746	TLCTEEVFPT	10	25	570.2677001953125	NaN	0	570.2677001953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TLCTEEVFPT_	ENSG00000023228|ENST00000233190|NDUFS1;nc|ENSG00000023228|P28331-2|NDUFS1;nc|ENSG00000023228|P28331-3|NDUFS1;nc|ENSG00000023228|P28331-4|NDUFS1;nc|ENSG00000023228|P28331-5|NDUFS1	10.265252068803164	0.42010282974921537	3				NaN	NaN	0	NaN	741	2800	3540
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3544	15.495	NaN	5366.9	30	0	790.83	0.106				-1	CNECGKAFCQN	11	18	665.7527465820312	NaN	0	665.7527465820312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_CNEC(Carbamidomethyl (C))GKAFC(Carbamidomethyl (C))QN_	ENSG00000274349|ENST00000621410|ZNF658;ENST00000377618.4_9:39444499-39464431:-|nuORF;ENST00000602828.1_9:39444499-39446956:-|nuORF;nc|ENSG00000198416|Q4V348|ZNF658B;nc|ENSG00000274349|Q5TYW1-2|ZNF658;ZNF658|p.F1031Cfs*3|1|0.41|ENSG00000274349|chr9:66920656-66920657|TT/-|frameshift_variant	4.338815125287529	0.456735970842152	3				NaN	NaN	0	NaN	742	2800	3540
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3545	15.497	NaN	4269.1	30	0	863.69	0.106				-1	LVKEPGCGCCM	11	35	606.748779296875	NaN	0	606.748779296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C),Oxidation (M)	_LVKEPGCGC(Carbamidomethyl (C))CM(Oxidation (M))_	ENSG00000115461|ENST00000233813|IGFBP5	15.641811463095205	0.456735970842152	3				NaN	NaN	0	NaN	743	2800	3540
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3546	15.498	NaN	3380	30	0	556.15	0.106	+			10116	ESMDEFMSITG	11	28	623.7536010742188	NaN	0	623.7536010742188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ESMDEFMSITG_	ENSG00000167037|ENST00000400358|SGSM1;ENST00000473458.5_1_22:25240737-25320238:+|nuORF;ENST00000480523.1_1_22:25240737-25320238:+|nuORF;nc|ENSG00000167037|Q2NKQ1-3|SGSM1;nc|ENSG00000167037|Q2NKQ1|SGSM1	19.1035232394073	0.456735970842152	3				NaN	NaN	0	NaN	744	2800	3540
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3547	15.5	NaN	3902.8	30	0	784.74	0.039			+	-1	PECCTEQCHD	10	26	639.7142333984375	NaN	0	639.7142333984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C)	_PEC(Carbamidomethyl (C))C(Carbamidomethyl (C))TEQCHD_	REV__ENSG00000182591|ENST00000332378|KRTAP11-1;REV__KRTAP11-1|p.Q82Rfs*2|1|0.06|ENSG00000182591|chr21:30881281-30881281|G/-|frameshift_variant	5.921104790170933	0.4201028297492154	3				NaN	NaN	0	NaN	745	2800	3540
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3560	15.528	NaN	10205	30	0	1513.6	0.211			+	30995	QERYVLMDQGD	11	74	685.3071760273597	1368.5997991215193	2	685.3082885742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_QERYVLM(Oxidation (M))DQGD_	REV__ENST00000437318.5_1_15:20588586-20648641:-|nuORF	56.632244143249146	0.3535169766007185	3				NaN	NaN	0	NaN	755	2803	3559
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3561	15.532	NaN	9018.3	30	0	901.07	0.106	+			7022	CSAWRRCHACS	11	74	697.286611424845	1392.5586699164899	2	697.2879638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))SAWRRCHAC(Carbamidomethyl (C))S_	ENST00000565644.5_1_16:87863759-87863915:-|nuORF	41.42661286455405	0.5384226294179143	3				NaN	NaN	0	NaN	756	2803	3559
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3562	15.534	NaN	5776.5	30	0	792.62	0.106			+	-1	LMVDKMCNNDC	11	71	708.2763522016901	NaN	0	708.2763061523438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C),Oxidation (M)	_LM(Oxidation (M))VDKMC(Carbamidomethyl (C))NNDC(Carbamidomethyl (C))_	REV__ENSG00000117501|ENST00000367759|MROH9;REV__MROH9|p.L759*|1|0.19|ENSG00000117501|chr1:171025412-171025412|T/-|frameshift_variant;REV__MROH9|p.L824Cfs*10|1|0.03|ENSG00000117501|chr1:171064224-171064224|T/-|frameshift_variant;REV__nc|ENSG00000117501|Q5TGP6|MROH9	20.83715455343099	0.456735970842152	3				NaN	NaN	0	NaN	757	2803	3559
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3563	15.535	NaN	1710	30	0	376.12	0.106			+	31836	QPSNGELKK	9	51	500.77551696454657	999.5364809958932	2	500.77484130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QPSNGELKK_	REV__ENSG00000167461|ENST00000300935|RAB8A;REV__ENST00000592971.1_1_19:16238799-16243111:+|nuORF	69.6276240434122	0.14239879520340665	3				NaN	NaN	0	NaN	758	2803	3559
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3564	15.537	NaN	1770.3	30	0	302.37	0.106				-1	TSLKSIMKK	9	36	526.3128662109375	NaN	0	526.3128662109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_TSLKSIM(Oxidation (M))KK_	ENSG00000132854|ENST00000371153|KANK4;nc|ENSG00000132854|Q5T7N3-2|KANK4	42.86426827375447	0.2558691296974908	3				NaN	NaN	0	NaN	759	2803	3559
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3565	15.539	NaN	3441.6	30	0	223.9	0.106			+	-1	RFMEDTCYACD	11	43	734.2686767578125	NaN	0	734.2686767578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Carbamidomethyl (C)	_RFMEDTC(Carbamidomethyl (C))YAC(Carbamidomethyl (C))D_	REV__ENSG00000132470|ENST00000200181|ITGB4;REV__ENST00000580542.5_1_17:73720783-73737087:+|nuORF;REV__ITGB4|p.A1304Pfs*140|1|0.27|ENSG00000132470|chr17:75752287-75752287|G/-|frameshift_variant;REV__ITGB4|p.E666Rfs*103|1|0.29|ENSG00000132470|chr17:75737326-75737326|G/-|frameshift_variant;REV__ITGB4|p.P1123Lfs*37|1|0.47|ENSG00000132470|chr17:75750158-75750158|C/-|frameshift_variant;REV__ITGB4|p.T1720Rfs*13|1|0.05|ENSG00000132470|chr17:75757046-75757052|GACCACT/-|frameshift_variant;REV__nc|ENSG00000132470|P16144-2|ITGB4;REV__nc|ENSG00000132470|P16144-3|ITGB4;REV__nc|ENSG00000132470|P16144-4|ITGB4;REV__nc|ENSG00000132470|P16144-5|ITGB4	5.220141733780809	0.456735970842152	3				NaN	NaN	0	NaN	760	2803	3559
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3566	15.541	NaN	2939.6	30	0	354.01	0.042			+	-1	MRCDECHYCEF	11	35	746.7559204101562	NaN	0	746.7559204101562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_MRCDECHYC(Carbamidomethyl (C))EF_	REV__ENSG00000129474|ENST00000262713|AJUBA;REV__nc|ENSG00000129474|Q96IF1-2|AJUBA	5.55782384252955	0.456735970842152	3				NaN	NaN	0	NaN	761	2803	3559
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3577	15.564	NaN	6268.4	30	0	571.4	0.214	+			40791	SVDQAGKYSK	10	71	541.7780402565785	1081.541527579957	2	541.777587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVDQAGKYSK_	ENSG00000124383|ENST00000244230|MPHOSPH10	115.91470973250675	0.03309960411491346	3				NaN	NaN	0	NaN	769	2806	3576
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3578	15.568	NaN	2322.9	30	0	776.27	0.038				-1	THTITYIPLC	10	36	609.814744863815	1217.61493679443	2	609.8146362304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_THTITYIPLC(Carbamidomethyl (C))_	ENSG00000196924|ENST00000369850|FLNA;FLNA|p.G2237Efs*109|1|0.28|ENSG00000196924|chrX:154352240-154352240|C/-|frameshift_variant;FLNA|p.Q1716Sfs*23|2|0.38|ENSG00000196924|chrX:154354896-154354896|G/-|frameshift_variant;FLNA|p.R2520Vfs*16|1|0.7|ENSG00000196924|chrX:154349560-154349560|G/-|frameshift_variant;nc|ENSG00000196924|P21333-2|FLNA	15.641811463095205	0.7369665665077569	3				NaN	NaN	0	NaN	770	2806	3576
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3585	15.586	NaN	638.59	30	0	116.44	0.144			+	46960	VKGSFFFSK	9	30	349.52547426742814	NaN	0	349.52545166015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VKGSFFFSK_	REV__chr13:113585149-113585774|152|17.7|0.97|4.19|+|2|None,TFDP1|1	18.262085536374414	0.37517301184500873	3				NaN	NaN	0	NaN	774	2809	3584
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3604	15.633	NaN	2223	30	0	447.59	0.142			+	50893	YFTTVVNL	8	26	478.7587228743701	955.5028928155402	2	478.7583312988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YFTTVVNL_	REV__ENSG00000157637|ENST00000374759|SLC38A10;REV__ENST00000546352.1_1_17:79244758-79256003:-|nuORF;REV__nc|ENSG00000157637|Q9HBR0-2|SLC38A10;REV__nc|ENSG00000157637|Q9HBR0-3|SLC38A10	18.324413293986947	0.7971860551947066	3				NaN	NaN	0	NaN	787	2815	3603
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3625	15.695	NaN	3062.8	30	0	289.28	0.214	+			40706	SVCEGKGLHR	10	56	571.7903516215177	1141.5661503098354	2	571.790771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SVC(Carbamidomethyl (C))EGKGLHR_	ENSG00000161011|ENST00000389805|SQSTM1;ENST00000466342.1_1_5:179250916-179260288:+|nuORF;nc|ENSG00000161011|Q13501-2|SQSTM1	76.16968421966216	0.22691431239609447	3				NaN	NaN	0	NaN	799	2824	3624
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3626	15.699	NaN	1612.2	30	0	189.06	0.035			+	7101	CWSRSKRV	8	36	511.2711486816406	NaN	0	511.2711486816406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_CWSRSKRV_	REV__ENSG00000084731|ENST00000264712|KIF3C	23.04248740728303	1.7418937515398478	3				NaN	NaN	0	NaN	800	2824	3624
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3635	15.719	NaN	13412	30	0	7067.8	0.214	+			381	AASAVVSAPVP	11	57	323.5187313417636	967.5343646254909	3	323.5184631347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AASAVVSAPVP_	ENSG00000135999|ENST00000258484|EPC2	20.94693142431847	0.7700749696703488	3				NaN	NaN	0	NaN	806	2827	3634
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3636	15.722	NaN	4004.2	30	0	1475.1	0.106			+	-1	QAPLPLCGH	9	33	496.7528076171875	NaN	0	496.7528076171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_QAPLPLC(Carbamidomethyl (C))GH_	REV__ENST00000344034.4_1_2:27610002-27632374:-|nuORF	25.450171626174864	0.34907449758287085	3				NaN	NaN	0	NaN	807	2827	3634
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3637	15.724	NaN	1205.2	30	0	573.77	0.106	+			42523	TAPVTSIH	8	22	413.22722319215865	824.4398934511173	2	413.2264099121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TAPVTSIH_	ENSG00000120685|ENST00000352251|PROSER1;nc|ENSG00000120685|Q86XN7-2|PROSER1;PROSER1|p.S352N|1|0.39|ENSG00000120685|chr13:39014197-39014197|C/T|missense_variant	26.79610172149135	0.7524337208463756	3				NaN	NaN	0	NaN	808	2827	3634
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3638	15.726	NaN	2157.9	30	0	573.18	0.106			+	13331	GKNTQDHCDG	10	20	537.715576171875	NaN	0	537.715576171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GKNTQDHCDG_	REV__ENST00000492155.5_1_10:13749216-13749624:-|nuORF	12.811709888998246	0.42010282974921537	3				NaN	NaN	0	NaN	809	2827	3634
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3639	15.728	NaN	2856.7	30	0	574.08	0.106				-1	LRIWDMMGA	9	37	583.769775390625	NaN	0	583.769775390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term),2 Oxidation (M)	_(Acetyl (Protein N-term))LRIWDM(Oxidation (M))M(Oxidation (M))GA_	ENST00000440496.5_1_X:102139312-102139411:+|nuORF	24.20275056022122	0.35506675290109213	3				NaN	NaN	0	NaN	810	2827	3634
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3640	15.73	NaN	2548.7	30	0	512.75	0.106			+	-1	PCPICTPMSC	10	25	562.716552734375	NaN	0	562.716552734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),Oxidation (M)	_PCPIC(Carbamidomethyl (C))TPM(Oxidation (M))SC_	REV__nc|ENSG00000142230|Q9UBE0-3|SAE1	10.865556482863946	0.4201028297492154	3				NaN	NaN	0	NaN	811	2827	3634
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3641	15.731	NaN	2593.1	30	0	973.47	0.036			+	-1	VYDMMYAFG	9	30	556.7265014648438	NaN	0	556.7265014648438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_VYDM(Oxidation (M))MYAFG_	REV__L1PA8_dup4178|chr8:94121319-94127043:-|4.057818296907117|0.2856926403965029|3.83|481.0|327|3|anti-sense	18.324413293986947	0.3749620627292244	3				NaN	NaN	0	NaN	812	2827	3634
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3654	15.759	NaN	10854	30	0	4449.8	0.214			+	48173	VTAAVERVK	9	59	324.86618003842716	971.5767107154816	3	324.86602783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTAAVERVK_	REV__ENSG00000146918|ENST00000356309|NCAPG2;REV__ENST00000432615.5_1_7:158424360-158447416:-|nuORF;REV__ENST00000467785.5_1_7:158424360-158447992:-|nuORF;REV__nc|ENSG00000146918|Q86XI2-2|NCAPG2	49.44154591367651	0.3095138337212152	3				NaN	NaN	0	NaN	822	2830	3653
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3655	15.762	NaN	754.87	30	0	58.365	0.106			+	2020	AKNGATIK	8	34	401.742431640625	NaN	0	401.742431640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AKNGATIK_	REV__tr|U7SHJ2|U7SHJ2_FUSNUAutotransporterdomain-containingprotein(Fragment)OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02176PE=4SV=1	31.954861631926434	1.7418937515398478	3				NaN	NaN	0	NaN	823	2830	3653
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3656	15.764	NaN	2201.9	30	0	684.34	0.106			+	-1	ILARQVCH	8	24	498.7748107910156	NaN	0	498.7748107910156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_ILARQVC(Carbamidomethyl (C))H_	REV__ENSG00000153487|ENST00000333219|ING1;REV__nc|ENSG00000153487|Q9UK53-3|ING1;REV__nc|ENSG00000153487|Q9UK53-4|ING1;REV__nc|ENSG00000153487|Q9UK53-5|ING1;REV__nc|ENSG00000153487|Q9UK53|ING1	14.664097394203935	1.7418937515398478	3				NaN	NaN	0	NaN	824	2830	3653
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3657	15.766	NaN	2779	30	0	532.54	0.037			+	30927	QELKGLAQDK	10	43	565.3143246816818	NaN	0	565.3145751953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QELKGLAQDK_	REV__ENSG00000056558|ENST00000373887|TRAF1;REV__nc|ENSG00000056558|Q13077-2|TRAF1;REV__TRAF1|p.N275Kfs*8|1|0.26|ENSG00000056558|chr9:120911394-120911395|-/T|frameshift_variant	26.69291269510374	0.4125295221340092	3				NaN	NaN	0	NaN	825	2830	3653
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3669	15.791	NaN	6656	30	0	799.5	0.143	+			41810	SVSSDRIQK	9	72	510.2776648969035	1018.540776860607	2	510.2777404785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSSDRIQK_	ENSG00000146278|ENST00000336032|PNRC1;nc|ENSG00000146278|Q12796-2|PNRC1;PNRC1|p.K251Sfs*14|2|0.25|ENSG00000146278|chr6:89083958-89083958|A/-|frameshift_variant	120.8684288430529	0.02067403653475984	3				NaN	NaN	0	NaN	834	2833	3668
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3680	15.818	NaN	1878.5	30	0	358.21	0.215	+			41921	SVVKITSKK	9	55	495.32099190855246	NaN	0	495.3212585449219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVVKITSKK_	ENSG00000036054|ENST00000394144|TBC1D23;ENST00000471273.1_1_3:100034907-100042509:+|nuORF;ENST00000486274.5_1_3:99980342-100042509:+|nuORF;nc|ENSG00000036054|Q9NUY8-2|TBC1D23	44.639436926238396	0.2436354862195384	3				NaN	NaN	0	NaN	842	2836	3679
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3681	15.821	NaN	727.32	30	0	103.73	0.033			+	-1	SPILMPVP	8	33	435.2454528808594	NaN	0	435.2454528808594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_SPILM(Oxidation (M))PVP_	REV__ENSG00000146463|ENST00000314607|ZMYM4;REV__nc|ENSG00000146463|Q5VZL5-2|ZMYM4;REV__nc|ENSG00000146463|Q5VZL5-3|ZMYM4;REV__nc|ENSG00000146463|Q5VZL5-4|ZMYM4;REV__ZMYM4|p.D1229Ifs*2|1|0.12|ENSG00000146463|chr1:35405175-35405175|G/-|frameshift_variant;REV__ZMYM4|p.N1222Kfs*15|1|0.25|ENSG00000146463|chr1:35405154-35405155|-/A|frameshift_variant	29.841539824830324	1.7418937515398478	3				NaN	NaN	0	NaN	843	2836	3679
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3689	15.841	NaN	2777.1	30	0	548.63	0.214	+			6557	AYKKTHETL	9	57	545.7987569685355	1089.5829610038709	2	545.7996826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AYKKTHETL_	ENSG00000111907|ENST00000534000|TPD52L1;ENST00000392483.6_1_6:125475019-125569560:+|nuORF;ENST00000532978.5_1_6:125475518-125573183:+|nuORF;nc|ENSG00000111907|Q16890-2|TPD52L1;nc|ENSG00000111907|Q16890-3|TPD52L1;nc|ENSG00000111907|Q16890-4|TPD52L1;nc|ENSG00000111907|Q16890-5|TPD52L1	63.53385203322761	0.18415635464017938	3				NaN	NaN	0	NaN	848	2839	3688
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3690	15.845	NaN	2246.4	30	0	496.98	0.036	+			45340	TVSKILHHK	9	49	531.8247747327996	1061.634996532399	2	531.82470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVSKILHHK_	CFTR|p.E1044Dfs*20|1|0.04|ENSG00000001626|chr7:117610661-117610662|-/TCAAAGAAAAC|frameshift_variant;CFTR|p.G1208Afs*3|1|0.3|ENSG00000001626|chr7:117627672-117627672|G/-|frameshift_variant;CFTR|p.L1258Ffs*7|1|0.26|ENSG00000001626|chr7:117642487-117642488|-/T|frameshift_variant;CFTR|p.S1297Lfs*31|1|0.28|ENSG00000001626|chr7:117652852-117652852|T/-|frameshift_variant;ENSG00000001626|ENST00000003084|CFTR;nc|ENSG00000001626|P13569-2|CFTR	56.43379154798735	0.2433427591689151	3				NaN	NaN	0	NaN	849	2839	3688
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3701	15.87	NaN	3309.9	30	0	1304.4	0.214	+			14472	GTCGKAFSR	9	46	492.24074348979303	982.4669340463861	2	492.24005126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GTC(Carbamidomethyl (C))GKAFSR_	ENSG00000124216|ENST00000244050|SNAI1	54.722347961057174	0.257609425301511	3				NaN	NaN	0	NaN	857	2842	3700
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3702	15.873	NaN	1354.9	30	0	340.66	0.106	+			40504	STYLPLEARAA	11	41	596.3210334375314	NaN	0	596.3206787109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STYLPLEARAA_	ENST00000571572.2_1_17:6353382-6353613:+|nuORF	28.5767321226876	0.4380616241468488	3				NaN	NaN	0	NaN	858	2842	3700
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3703	15.875	NaN	6100.1	30	0	1538.7	0.027				-1	 	0	64	207.03381619351057	NaN	0	207.03414916992188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	859	2842	3700
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3709	15.891	NaN	3075.9	30	0	589.76	0.212	+			22930	KVQDVKKTIQK	11	48	657.9075766450271	1313.8006003568541	2	657.9080810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVQDVKKTIQK_	ENSG00000133706|ENST00000394434|LARS1;ENST00000508667.5_1_5:145522961-145531505:-|nuORF;nc|ENSG00000133706|Q9P2J5-2|LARS1	68.62578634547417	0.24719609611953774	3				NaN	NaN	0	NaN	862	2845	3708
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3710	15.895	NaN	1691.3	30	0	251.5	0.035	+			4455	ATIMSGSKAK	10	44	497.27420358871757	992.5338542442352	2	497.2731018066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATIMSGSKAK_	ENSG00000198901|ENST00000394249|PRC1;nc|ENSG00000198901|O43663-2|PRC1;nc|ENSG00000198901|O43663-3|PRC1;nc|ENSG00000198901|O43663-4|PRC1	60.1669710687717	0.3643216362415131	3				NaN	NaN	0	NaN	863	2845	3708
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3718	15.913	NaN	2267	30	0	424.83	0.214	+			4341	ATGNWGDQKK	10	53	552.7756127540564	1103.5366725749127	2	552.7748413085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATGNWGDQKK_	ENSG00000047315|ENST00000314595|POLR2B;POLR2B|p.N1030Sfs*23|1|0.07|ENSG00000047315|chr4:57025384-57025385|-/CT|frameshift_variant	86.88156770896713	0.14892753630261096	3				NaN	NaN	0	NaN	868	2848	3717
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3719	15.917	NaN	1652.4	30	0	261.58	0.036	+			5966	AVLLQKREK	9	47	542.8455859997342	1083.6766190662684	2	542.8450317382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVLLQKREK_	ENSG00000168907|ENST00000397272|PLA2G4F;nc|ENSG00000168907|Q68DD2-2|PLA2G4F;nc|ENSG00000168907|Q68DD2-3|PLA2G4F	40.05817265558897	0.419577045485086	3				NaN	NaN	0	NaN	869	2848	3717
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3726	15.933	NaN	2691.8	30	0	395.91	0.214	+			39321	STAVATDVKK	10	61	510.2904026431942	1018.5662523531885	2	510.289794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STAVATDVKK_	ENSG00000128298|ENST00000381669|BAIAP2L2;nc|ENSG00000128298|Q6UXY1-2|BAIAP2L2	106.68306549817024	0.05784995512091477	3				NaN	NaN	0	NaN	873	2851	3725
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3727	15.937	NaN	1013.5	30	0	385.78	0.106			+	-1	LVLEMYKK	8	29	347.2007464517511	NaN	0	347.2008361816406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LVLEM(Oxidation (M))YKK_	REV__F9|p.N147Kfs*60|1|0.03|ENSG00000101981|chrX:139548411-139548412|-/GTACATGGAAC|frameshift_variant	31.954861631926434	1.7418937515398478	3				NaN	NaN	0	NaN	874	2851	3725
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3728	15.939	NaN	1124.8	30	0	283.03	0.037			+	13524	GLQSLKITQP	10	36	362.21725896927404	NaN	0	362.1985168457031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GLQSLKITQP_	REV__ENST00000263636.4_1_2:160741749-160742974:-|nuORF	32.81241826257853	0.3924360933802784	3				NaN	NaN	0	NaN	875	2851	3725
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3761	16.019	NaN	2424	30	0	477.94	0.143	+			24814	LIQKTIKK	8	47	324.5587802107844	970.6545112325532	3	324.5584716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LIQKTIKK_	ENSG00000135218|ENST00000447544|CD36;ENST00000441109.6_1_7:80276056-80285961:+|nuORF;ENST00000480599.6_1_7:80276056-80276293:+|nuORF;nc|ENSG00000135218|P16671-2|CD36;nc|ENSG00000135218|P16671-3|CD36;nc|ENSG00000135218|P16671-4|CD36	14.664097394203935	0.7913966407026132	3				NaN	NaN	0	NaN	899	2860	3760
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3777	16.054	NaN	5245	30	0	1334.1	0.214	+			14162	GSNGTIIRK	9	61	473.2776504004005	944.540747867601	2	473.27752685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSNGTIIRK_	ENSG00000117983|ENST00000529681|MUC5B;MUC5B|p.A1645Gfs*130|1|0.48|ENSG00000117983|chr11:1241806-1241807|-/C|frameshift_variant;MUC5B|p.E2447Vfs*233|1|0.15|ENSG00000117983|chr11:1244218-1244219|TG/-|frameshift_variant;MUC5B|p.E2929Gfs*98|1|0.13|ENSG00000117983|chr11:1245660-1245661|-/GC|frameshift_variant;MUC5B|p.P2717Qfs*3|2|0.21|ENSG00000117983|chr11:1245025-1245025|C/-|frameshift_variant;MUC5B|p.P3417Qfs*3|1|0.41|ENSG00000117983|chr11:1247125-1247125|C/-|frameshift_variant;MUC5B|p.S2205Qfs*54|1|0.2|ENSG00000117983|chr11:1243486-1243487|-/C|frameshift_variant;MUC5B|p.S3126Pfs*13|1|0.37|ENSG00000117983|chr11:1246251-1246251|C/-|frameshift_variant;MUC5B|p.S3878Pfs*27|1|0.13|ENSG00000117983|chr11:1248507-1248507|C/-|frameshift_variant;MUC5B|p.S4017Lfs*56|1|0.22|ENSG00000117983|chr11:1248928-1248929|-/C|frameshift_variant;MUC5B|p.T4706Pfs*4|2|0.37|ENSG00000117983|chr11:1250996-1250996|A/-|frameshift_variant	72.87924865735499	0.12833875048249987	3				NaN	NaN	0	NaN	912	2863	3776
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3778	16.057	NaN	2265.2	30	0	1073.1	0.106	+			23066	KVTSGLLIRG	10	38	348.5574344041863	1042.650473812759	3	348.55718994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVTSGLLIRG_	ENST00000586719.5_1_19:12883476-12885666:-|nuORF;ENST00000589134.5_1_19:12885194-12886263:-|nuORF;ENST00000589965.5_1_19:12876298-12886263:-|nuORF;ENST00000590839.5_1_19:12883046-12889158:-|nuORF	30.317721548370564	0.6322445173429027	3				NaN	NaN	0	NaN	913	2863	3776
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3779	16.059	NaN	1813.2	30	0	188.54	0.035			+	9158	EGNTCRVDS	9	36	490.7075775781542	979.4006022231084	2	490.7072448730469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EGNTCRVDS_	REV__ENSG00000196277|ENST00000357716|GRM7;REV__GRM7|p.E384Kfs*28|1|0.36|ENSG00000196277|chr3:7415132-7415132|A/-|frameshift_variant;REV__GRM7|p.F809Lfs*21|1|0.35|ENSG00000196277|chr3:7579326-7579326|T/-|frameshift_variant;REV__GRM7|p.K906Efs*6|1|0.11|ENSG00000196277|chr3:7740366-7740367|-/A|frameshift_variant;REV__GRM7|p.W590Gfs*3|1|0.29|ENSG00000196277|chr3:7578669-7578669|C/-|frameshift_variant;REV__nc|ENSG00000196277|Q14831-2|GRM7;REV__nc|ENSG00000196277|Q14831-3|GRM7;REV__nc|ENSG00000196277|Q14831-4|GRM7;REV__nc|ENSG00000196277|Q14831-5|GRM7	40.77816245573522	0.41113185337114944	3				NaN	NaN	0	NaN	914	2863	3776
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3784	16.073	NaN	2915.5	30	0	416.56	0.144	+			21084	KKNLAQEKK	9	65	543.8353952361335	1085.656237539067	2	543.835205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KKNLAQEKK_	ENSG00000171804|ENST00000447313|WDR87;nc|ENSG00000171804|Q6ZQQ6-2|WDR87;nc|ENSG00000171804|Q6ZQQ6|WDR87;WDR87|p.A2794Pfs*4|1|0.26|ENSG00000171804|chr19:37885175-37885175|T/-|frameshift_variant;WDR87|p.K2720Rfs*57|5|0.35|ENSG00000171804|chr19:37885395-37885395|T/-|frameshift_variant;WDR87|p.Q1927Tfs*32|1|0.44|ENSG00000171804|chr19:37887775-37887776|-/T|frameshift_variant;WDR87|p.R2063Gfs*11|1|0.12|ENSG00000171804|chr19:37887367-37887367|T/-|frameshift_variant;WDR87|p.R2063Kfs*25|1|0.32|ENSG00000171804|chr19:37887366-37887367|-/T|frameshift_variant	71.87747018426188	0.13267044672804276	3				NaN	NaN	0	NaN	916	2866	3783
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3795	16.1	NaN	2398	30	0	610.67	0.214	+			9166	EGPEPEDVHL	10	29	561.2572341925239	1120.4999154518478	2	561.2569580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EGPEPEDVHL_	ENST00000504520.6_1_4:83821685-83821766:-|nuORF	11.511019455917149	0.7579564031639042	3				NaN	NaN	0	NaN	924	2869	3794
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3796	16.104	NaN	2183.5	30	0	250.63	0.106	+			39631	STIDPSGTRSK	11	38	574.7990191044381	1147.5834852756761	2	574.799072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STIDPSGTRSK_	ENSG00000121931|ENST00000369763|LRIF1	32.61576334919814	0.6476784391172209	3				NaN	NaN	0	NaN	925	2869	3794
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3797	16.106	NaN	3409.3	30	0	732.53	0.106	+			6446	AVYENAREK	9	55	540.2780872622109	1078.5416215912217	2	540.27734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVYENAREK_	ENSG00000164941|ENST00000523731|INTS8;ENST00000523321.5_1_8:95835614-95871872:+|nuORF;INTS8|p.F279Lfs*6|1|0.34|ENSG00000164941|chr8:94836602-94836602|T/-|frameshift_variant;nc|ENSG00000164941|Q75QN2-2|INTS8	85.16082228582465	0.07850854922700509	3				NaN	NaN	0	NaN	926	2869	3794
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3798	16.108	NaN	1426.1	30	0	138.99	0.035			+	31120	QFVNNIWK	8	52	524.7821355462169	1047.5497181592336	2	524.7826538085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QFVNNIWK_	REV__ENSG00000137877|ENST00000320955|SPTBN5;REV__SPTBN5|p.A3297Gfs*48|1|0.56|ENSG00000137877|chr15:41853672-41853673|-/C|frameshift_variant;REV__SPTBN5|p.G2751Afs*60|1|0.08|ENSG00000137877|chr15:41857685-41857685|C/-|frameshift_variant;REV__SPTBN5|p.R482Afs*7|1|0.21|ENSG00000137877|chr15:41885811-41885812|-/C|frameshift_variant	52.29916861842294	0.578018602984656	3				NaN	NaN	0	NaN	927	2869	3794
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3811	16.135	NaN	3632.3	30	0	482.34	0.211	+			6456	AVYGQKEIHRK	11	52	664.8740984111523	1327.7336438891045	2	664.87451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVYGQKEIHRK_	ENSG00000145907|ENST00000356245|G3BP1;ENST00000413279.1_1_2:136269117-136269381:-|nuORF;ENST00000519832.1_1_5:151166169-151170647:+|nuORF;nc|ENSG00000145907|Q13283-2|G3BP1	37.50817390946774	0.5920388381045607	3				NaN	NaN	0	NaN	937	2872	3810
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3812	16.139	NaN	1428.7	30	0	361.69	0.036				-1	DRCPAPGPHP	10	29	552.2570906139025	1102.499628294605	2	552.256591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_DRC(Carbamidomethyl (C))PAPGPHP_	ENSG00000166886|ENST00000300131|NAB2;nc|ENSG00000166886|Q15742-3|NAB2	21.9598887501803	0.7004979571547932	3				NaN	NaN	0	NaN	938	2872	3810
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3824	16.164	NaN	5961.6	30	0	1456.9	0.214	+			15599	GVIKAVDKK	9	59	479.30814970708144	956.6017464809629	2	479.3080749511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVIKAVDKK_	ENSG00000156508|ENST00000309268|EEF1A1;ENST00000417549.1_1_13:28789725-28790031:+|nuORF;ENST00000419025.1_1_3:183744159-183744318:-|nuORF;ENST00000436459.2_1_9:135895553-135896258:+|nuORF;ENST00000443590.1_1_2:107313789-107313948:-|nuORF;ENST00000513637.1_1_5:43495177-43495438:-|nuORF;ENST00000559385.1_1_15:53229359-53229566:-|nuORF;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	70.8162118820467	0.13725933411854815	3				NaN	NaN	0	NaN	947	2875	3823
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3825	16.167	NaN	4149	30	0	861.62	0.037	+			2945	ASDPNVSKKLK	11	66	593.8430004928264	1185.6714480524527	2	593.8425903320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASDPNVSKKLK_	ENSG00000151474|ENST00000357447|FRMD4A	49.280055037864464	0.43096356235087463	3				NaN	NaN	0	NaN	948	2875	3823
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3838	16.195	NaN	2584.9	30	0	440.8	0.143	+			6373	AVTYTEHAK	9	56	510.26166152466095	1018.5087701161219	2	510.2618408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVTYTEHAK_	ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2	74.25504064058377	0.12238981753128622	3				NaN	NaN	0	NaN	958	2878	3837
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3859	16.246	NaN	3521.4	30	0	592.58	0.214	+			49029	VVHDCMYVM	9	73	564.7278215277518	NaN	0	564.7278442382812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_VVHDCM(Oxidation (M))YVM(Oxidation (M))_	KBTBD2|p.I431M|1|0.15|ENSG00000170852|chr7:32869924-32869924|A/C|missense_variant	40.5726180659479	0.27166212580479165	3				NaN	NaN	0	NaN	973	2884	3858
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3860	16.249	NaN	3784.3	30	0	706.55	0.039			+	21781	KQTGDLLTQQK	11	67	630.3506200686985	1258.686687204197	2	630.3509521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KQTGDLLTQQK_	REV__CCAR2|p.R417Gfs*89|3|0.26|ENSG00000158941|chr8:22615462-22615462|C/-|frameshift_variant	58.2462437865262	0.33910980880557884	3				NaN	NaN	0	NaN	974	2884	3858
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3867	16.267	NaN	7626.2	30	0	1012.7	0.214			+	20326	KEQVQLKRT	9	81	565.3385121093256	1128.6624712854511	2	565.3385009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEQVQLKRT_	REV__ENSG00000172361|ENST00000398545|CFAP53	136.5150327860613	0.012115003498012726	3				NaN	NaN	0	NaN	978	2887	3866
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3868	16.271	NaN	2192.8	30	0	401.96	0.106				-1	VVAHCCCCS	9	44	576.7073974609375	NaN	0	576.7073974609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	4 Carbamidomethyl (C)	_VVAHC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))S_	ENSG00000267795|ENST00000586005|SMIM22;ENST00000588894.1_1_16:4845878-4846229:+|nuORF;nc|ENSG00000267795|K7EJ46|SMIM22	13.775330524044264	0.3903584932235582	3				NaN	NaN	0	NaN	979	2887	3866
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3869	16.273	NaN	1494.2	30	0	310.45	0.036			+	42414	TAKQPQSITL	10	45	543.8117948860285	1085.6090368388568	2	543.810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TAKQPQSITL_	REV__ARFGEF3|p.E1064Sfs*10|1|0.29|ENSG00000112379|chr6:138291869-138291869|C/-|frameshift_variant;REV__ARFGEF3|p.F1125*|1|0.07|ENSG00000112379|chr6:138293997-138293998|TT/-|frameshift_variant;REV__ENSG00000112379|ENST00000251691|ARFGEF3	30.317721548370564	0.6322445173429027	3				NaN	NaN	0	NaN	980	2887	3866
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3896	16.332	NaN	3537.9	30	0	727.9	0.214	+			40721	SVCGKSFHR	9	56	539.2666179161362	1076.5186828990722	2	539.2666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SVC(Carbamidomethyl (C))GKSFHR_	ENSG00000066422|ENST00000312938|ZBTB11;ZBTB11|p.E974Nfs*14|1|0.1|ENSG00000066422|chr3:101651408-101651408|C/-|frameshift_variant	70.8162118820467	0.13725933411854815	3				NaN	NaN	0	NaN	1001	2893	3895
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3897	16.336	NaN	3523.2	30	0	454.16	0.04			+	-1	PHCLSARDWFI	11	60	701.3404246854735	1400.666296437747	2	701.3403930664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_PHC(Carbamidomethyl (C))LSARDWFI_	REV__ENST00000324198.10_1_22:26120814-26120889:+|nuORF	28.081489160057373	0.6952392775027776	3				NaN	NaN	0	NaN	1002	2893	3895
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3903	16.351	NaN	1432.7	30	0	308.3	0.215	+			41939	SVVQTLLQQ	9	41	508.2922071946726	1014.5698614561452	2	508.2915344238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVVQTLLQQ_	ENSG00000230989|ENST00000433866|HSBP1	51.19269402634007	0.2889735674168909	3				NaN	NaN	0	NaN	1005	2896	3902
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3904	16.354	NaN	716.03	30	0	231.38	0.036			+	33784	RQCKLQHH	8	28	525.2733154296875	NaN	0	525.2733154296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RQCKLQHH_	REV__ENST00000342992.10_3_2:179536946-179538410:-|nuORF	20.481830146152948	1.741893751539848	3				NaN	NaN	0	NaN	1006	2896	3902
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3912	16.372	NaN	5497.2	30	0	810.6	0.142	+			3180	ASITPVKSK	9	69	465.78482832769527	929.5551037221906	2	465.7843933105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASITPVKSK_	ENSG00000168386|ENST00000477258|FILIP1L;nc|ENSG00000168386|Q4L180-2|FILIP1L;nc|ENSG00000168386|Q4L180-3|FILIP1L;nc|ENSG00000168386|Q4L180-5|FILIP1L;nc|ENSG00000168386|Q4L180-6|FILIP1L;nc|ENSG00000168386|Q4L180-7|FILIP1L;nc|ENSG00000168386|Q4L180|FILIP1L	95.81516180277367	0.04847050768394289	3				NaN	NaN	0	NaN	1011	2899	3911
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3926	16.403	NaN	3618.7	30	0	555.39	0.214	+			38871	SSNSYAIKK	9	54	499.26922366827944	996.5238944033589	2	499.2688903808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSNSYAIKK_	ENSG00000083845|ENST00000196551|RPS5;ENST00000599232.1_1_19:58906030-58906114:+|nuORF	91.26522074875469	0.06129826844580791	3				NaN	NaN	0	NaN	1022	2902	3925
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3927	16.407	NaN	3844.5	30	0	1280.7	0.035			+	34175	RTCCLLQQ	8	52	511.24818116702386	1020.4818094008477	2	511.2484436035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_RTC(Carbamidomethyl (C))CLLQQ_	REV__ENSG00000177548|ENST00000358201|RABEP2;REV__nc|ENSG00000177548|Q9H5N1-2|RABEP2	53.351449002276354	0.5676011784961348	3				NaN	NaN	0	NaN	1023	2902	3925
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3942	16.437	NaN	1741.9	30	0	360.96	0.214				-1	YEDSGSSLMG	10	28	552.2113037109375	NaN	0	552.2113037109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))YEDSGSSLM(Oxidation (M))G_	ENSG00000137766|ENST00000260323|UNC13C;UNC13C|p.D1718Rfs*8|1|0.19|ENSG00000137766|chr15:54500163-54500164|-/A|frameshift_variant;UNC13C|p.F1525Lfs*3|2|0.44|ENSG00000137766|chr15:54333842-54333842|T/-|frameshift_variant;UNC13C|p.P2056Qfs*10|1|0.33|ENSG00000137766|chr15:54622384-54622384|C/-|frameshift_variant;UNC13C|p.R832I|1|0.43|ENSG00000137766|chr15:54015398-54015398|G/T|missense_variant;UNC13C|p.W1592Gfs*7|1|0.85|ENSG00000137766|chr15:54393104-54393104|T/-|frameshift_variant	16.473147378115264	0.4201028297492154	3				NaN	NaN	0	NaN	1035	2905	3941
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3943	16.441	NaN	1317.7	30	0	181.18	0.106	+			24416	LGAPIIPHT	9	39	459.7752955016948	NaN	0	459.7752685546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LGAPIIPHT_	POT1|p.R117H|1|0.1|ENSG00000128513|chr7:124863546-124863546|C/T|missense_variant	44.53106598305862	0.24438232876904814	3				NaN	NaN	0	NaN	1036	2905	3941
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3944	16.443	NaN	1838.1	30	0	517.06	0.106			+	-1	YSCGLGGHTCS	11	14	571.2214965820312	NaN	0	571.2214965820312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_YSCGLGGHTC(Carbamidomethyl (C))S_	REV__ENST00000324432.9_1_7:76134899-76135220:+|nuORF	9.182911543092327	0.456735970842152	3				NaN	NaN	0	NaN	1037	2905	3941
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3945	16.445	NaN	1920.2	30	0	388.61	0.106				-1	YMVMSACFL	9	20	548.7310791015625	NaN	0	548.7310791015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Oxidation (M)	_YM(Oxidation (M))VM(Oxidation (M))SACFL_	ENSG00000125734|ENST00000264080|GPR108;ENST00000595908.5_1_19:6732389-6735558:-|nuORF	12.206847966760668	0.39566704307768535	3				NaN	NaN	0	NaN	1038	2905	3941
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3946	16.446	NaN	1538.5	30	0	364.41	0.106	+			50929	YGSESGEEDF	10	22	560.2088012695312	NaN	0	560.2088012695312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YGSESGEEDF_	ENSG00000140398|ENST00000355059|NEIL1;ENST00000565121.1_1_15:75645991-75646635:+|nuORF;ENST00000567393.5_1_15:75645991-75647372:+|nuORF	10.265252068803164	0.42010282974921537	3				NaN	NaN	0	NaN	1039	2905	3941
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3947	16.448	NaN	1907.3	30	0	293.96	0.036				-1	EEFKMEKR	8	33	556.7738037109375	NaN	0	556.7738037109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_EEFKM(Oxidation (M))EKR_	GPR27|p.T278M|1|0.26|ENSG00000170837|chr3:71754882-71754882|C/T|missense_variant	35.61828744233558	1.7418937515398478	3				NaN	NaN	0	NaN	1040	2905	3941
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3960	16.476	NaN	13847	30	0	1914.6	0.214	+			2285	ALYSGVHKK	9	80	501.79060774306396	1001.5666625529279	2	501.7900085449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ALYSGVHKK_	ENSG00000111961|ENST00000367467|SASH1;SASH1|p.N810Tfs*48|1|0.29|ENSG00000111961|chr6:148543895-148543895|A/-|frameshift_variant	140.11223852658463	0.010427410095706195	3				NaN	NaN	0	NaN	1050	2908	3959
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3961	16.48	NaN	8068.1	30	0	1042.1	0.106	+			4194	ATFSTGERK	9	60	498.75892860309426	NaN	0	498.759033203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATFSTGERK_	ENSG00000178896|ENST00000316052|EXOSC4	107.00750918261382	0.012399597248013027	3				NaN	NaN	0	NaN	1051	2908	3959
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3962	16.482	NaN	7862.3	30	0	1416.3	0.106	+			14403	GTAPAFKQK	9	64	474.2691202496906	946.5236875661813	2	474.2686767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTAPAFKQK_	ENSG00000065534|ENST00000360304|MYLK;ENST00000504946.5_1_3:123400948-123419770:-|nuORF;MYLK|p.P1126Qfs*8|1|0.11|ENSG00000065534|chr3:123700091-123700091|G/-|frameshift_variant;nc|ENSG00000065534|Q15746-11|MYLK;nc|ENSG00000065534|Q15746-2|MYLK;nc|ENSG00000065534|Q15746-3|MYLK;nc|ENSG00000065534|Q15746-4|MYLK;nc|ENSG00000065534|Q15746-5|MYLK;nc|ENSG00000065534|Q15746-6|MYLK;nc|ENSG00000065534|Q15746-7|MYLK	90.36981228632155	0.0638227155548745	3				NaN	NaN	0	NaN	1052	2908	3959
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3963	16.484	NaN	4156.2	30	0	1335	0.106	+			7702	DLNCNPNNK	9	30	516.233231877123	1030.4519108210459	2	516.23291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DLNCNPNNK_	ENSG00000136111|ENST00000377636|TBC1D4;nc|ENSG00000136111|O60343-2|TBC1D4;nc|ENSG00000136111|O60343-3|TBC1D4;nc|ENSG00000136111|O60343-4|TBC1D4;nc|ENSG00000136111|O60343-5|TBC1D4	19.996771675451527	0.6112419832031292	3				NaN	NaN	0	NaN	1053	2908	3959
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3964	16.485	NaN	4683.2	30	0	1133.8	0.106	+			22346	KTGKALNLGYT	11	49	583.332763671875	NaN	0	583.332763671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KTGKALNLGYT_	COL6A3|p.A919T|1|0.27|ENSG00000163359|chr2:237377087-237377087|C/T|missense_variant	40.015381236134715	0.3870319917203201	3				NaN	NaN	0	NaN	1054	2908	3959
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3965	16.487	NaN	5905.1	30	0	1468.4	0.106			+	-1	LGLMRTEE	8	38	482.74314957799527	963.4717462227906	2	482.7416687011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_LGLM(Oxidation (M))RTEE_	REV__nc|ENSG00000293513|Q8NCQ3|LINC00301	31.954861631926434	0.7126016770032289	3				NaN	NaN	0	NaN	1055	2908	3959
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3966	16.489	NaN	2192.8	30	0	374.42	0.036			+	33376	RHTKRKNAP	9	40	554.330078125	NaN	0	554.330078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RHTKRKNAP_	REV__sp|F5HFA5|UL117_HCMVMProteinUL117OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL117PE=3SV=1;REV__sp|P16770|UL117_HCMVAProteinUL117OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL117PE=3SV=1	22.579656572578934	0.3605601358598771	3				NaN	NaN	0	NaN	1056	2908	3959
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3978	16.514	NaN	8868.4	30	0	577.58	0.214			+	5487	AVAAVARAR	9	62	442.77521548066204	NaN	0	442.7752990722656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVAAVARAR_	REV__ENST00000358154.7_1_16:21610933-21611029:+|nuORF	163.84426431716093	0.01376933830560066	3				NaN	NaN	0	NaN	1065	2911	3977
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3979	16.517	NaN	2823	30	0	288.51	0.106	+			22204	KSTLVQHQ	8	52	470.76373316127007	NaN	0	470.76397705078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KSTLVQHQ_	ENSG00000180884|ENST00000404801|ZNF792	47.657333605630114	1.7418937515398478	3				NaN	NaN	0	NaN	1066	2911	3977
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3980	16.519	NaN	3072.2	30	0	1293.2	0.106			+	-1	RSGQCSFMD	9	30	523.7060200322633	NaN	0	523.7060546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_RSGQCSFM(Oxidation (M))D_	REV__ENSG00000168702|ENST00000389484|LRP1B;REV__LRP1B|p.C3762Lfs*2|1|0.32|ENSG00000168702|chr2:140358089-140358090|-/A|frameshift_variant;REV__LRP1B|p.G4130Mfs*20|1|0.06|ENSG00000168702|chr2:140324019-140324020|-/AT|frameshift_variant;REV__LRP1B|p.H4368Tfs*4|1|0.47|ENSG00000168702|chr2:140274465-140274465|C/-|frameshift_variant;REV__LRP1B|p.I3028Nfs*2|1|0.39|ENSG00000168702|chr2:140492645-140492646|-/T|frameshift_variant;REV__LRP1B|p.N3100Kfs*6|1|0.21|ENSG00000168702|chr2:140485468-140485469|-/T|frameshift_variant;REV__LRP1B|p.N3434Tfs*84|1|0.47|ENSG00000168702|chr2:140442617-140442617|T/-|frameshift_variant;REV__LRP1B|p.N4135Mfs*14|1|0.13|ENSG00000168702|chr2:140324003-140324003|T/-|frameshift_variant;REV__LRP1B|p.R3957Kfs*11|2|0.15|ENSG00000168702|chr2:140350819-140350820|-/T|frameshift_variant;REV__LRP1B|p.Y3120*|1|0.16|ENSG00000168702|chr2:140485402-140485408|AGTAGGG/-|frameshift_variant	17.364965105453717	0.37820932774828947	3				NaN	NaN	0	NaN	1067	2911	3977
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3981	16.521	NaN	5143.8	30	0	1381.1	0.106				-1	ACGKSFCH	8	43	455.18893418923216	908.3633154452643	2	455.1884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_ACGKSFC(Carbamidomethyl (C))H_	ENSG00000198105|ENST00000395867|ZNF248	26.79610172149135	0.7524337208463756	3				NaN	NaN	0	NaN	1068	2911	3977
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3982	16.523	NaN	2761.2	30	0	370.33	0.106			+	-1	GRSNESICE	9	43	526.2253720584756	1050.4361911837511	2	526.2260131835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_GRSNESIC(Carbamidomethyl (C))E_	REV__CNTN3|p.A299S|1|0.22|ENSG00000113805|chr3:74369240-74369240|C/A|missense_variant	32.81241826257853	0.4965981579233955	3				NaN	NaN	0	NaN	1069	2911	3977
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3983	16.525	NaN	3026	30	0	380.38	0.106			+	-1	EQLHVVDM	8	36	493.7320556640625	NaN	0	493.7320556640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_EQLHVVDM(Oxidation (M))_	REV__ENSG00000163879|ENST00000652629|DNALI1	25.450171626174864	1.7418937515398478	3				NaN	NaN	0	NaN	1070	2911	3977
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3984	16.526	NaN	4718.4	30	0	1161.7	0.037			+	-1	DHIQSGCGMC	10	36	590.7105102539062	NaN	0	590.7105102539062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C),Oxidation (M)	_DHIQSGC(Carbamidomethyl (C))GM(Oxidation (M))C(Carbamidomethyl (C))_	REV__ISL2|p.V28M|1|0.1|ENSG00000159556|chr15:76337801-76337801|G/A|missense_variant	9.705651100619752	0.4201028297492154	3				NaN	NaN	0	NaN	1071	2911	3977
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3997	16.554	NaN	7320.5	30	0	1577.7	0.214	+			19398	KANLTWSVKH	10	73	592.3308892523148	1182.6472255714295	2	592.3308715820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KANLTWSVKH_	ENSG00000104774|ENST00000456935|MAN2B1;nc|ENSG00000104774|O00754-2|MAN2B1	41.080066990542036	0.5391928043837881	3				NaN	NaN	0	NaN	1081	2914	3996
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3998	16.558	NaN	4505.4	30	0	1583.6	0.106	+			32514	QVQPVDGATRK	11	50	599.8304443359375	NaN	0	599.8304443359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QVQPVDGATRK_	ENSG00000182307|ENST00000331434|C8orf33;ENST00000524395.5_1_8:146277890-146279540:+|nuORF;ENST00000530455.5_1_8:146277890-146279540:+|nuORF;ENST00000534350.5_1_8:146279384-146279540:+|nuORF;nc|nan|Q9H7E9-2|C8orf33	42.33807565288922	0.3703495330385095	3				NaN	NaN	0	NaN	1082	2914	3996
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	3999	16.56	NaN	4803.7	30	0	1012	0.106				-1	RTKYMAQIQ	9	59	577.8035222057566	1153.5924914783131	2	577.8033447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_RTKYM(Oxidation (M))AQIQ_	CCDC168|p.G4714Rfs*2|1|0.22|ENSG00000175820|chr13:102736557-102736558|-/T|frameshift_variant;CCDC168|p.G6141Lfs*25|1|0.03|ENSG00000175820|chr13:102732276-102732277|-/AGGAAAAATCACCAAACACTAG|frameshift_variant;CCDC168|p.K5937Nfs*10|1|0.37|ENSG00000175820|chr13:102732886-102732886|T/-|frameshift_variant;CCDC168|p.K6236Nfs*3|1|0.42|ENSG00000175820|chr13:102731989-102731989|T/-|frameshift_variant;CCDC168|p.L5048Ifs*6|1|0.12|ENSG00000175820|chr13:102735555-102735556|-/T|frameshift_variant;CCDC168|p.L5234*|1|0.12|ENSG00000175820|chr13:102735001-102735001|A/-|frameshift_variant;CCDC168|p.M5025Cfs*8|1|0.29|ENSG00000175820|chr13:102735624-102735624|T/-|frameshift_variant;ENSG00000175820|ENST00000322527|CCDC168	40.77816245573522	0.41113185337114944	3				NaN	NaN	0	NaN	1083	2914	3996
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4000	16.561	NaN	1962.7	30	0	462.88	0.106			+	44206	TRGSFLHTA	9	49	495.2616683240543	NaN	0	495.2899475097656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TRGSFLHTA_	REV__ADAM11|p.D614Tfs*33|1|0.15|ENSG00000073670|chr17:44777537-44777537|G/-|frameshift_variant;REV__ADAM11|p.G347Afs*11|1|0.26|ENSG00000073670|chr17:44774337-44774337|G/-|frameshift_variant;REV__ENSG00000073670|ENST00000200557|ADAM11;REV__nc|ENSG00000073670|O75078-2|ADAM11	23.04248740728303	0.3589936788096251	3				NaN	NaN	0	NaN	1084	2914	3996
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4001	16.563	NaN	1831.6	30	0	264.75	0.106				-1	AVCEKTFKH	9	49	560.2847941749828	NaN	0	560.2847900390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_AVC(Carbamidomethyl (C))EKTFKH_	ENSG00000166188|ENST00000299237|ZNF319	34.172542307311794	0.30503706118289736	3				NaN	NaN	0	NaN	1085	2914	3996
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4002	16.565	NaN	4426	30	0	952.19	0.106			+	-1	CVHCSYYYPH	10	38	685.7696533203125	NaN	0	685.7696533203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))C(Carbamidomethyl (C))VHCSYYYPH_	REV__ENSG00000151612|ENST00000508784|ZNF827;REV__nc|ENSG00000151612|Q17R98-2|ZNF827;REV__nc|ENSG00000151612|Q17R98-3|ZNF827;REV__ZNF827|p.K892T|1|0.47|ENSG00000151612|chr4:145775807-145775807|T/G|missense_variant	11.511019455917149	0.4201028297492154	3				NaN	NaN	0	NaN	1086	2914	3996
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4003	16.567	NaN	3985.2	30	0	780.78	0.039			+	50314	WTDGVWFCSW	10	23	643.76806640625	NaN	0	643.76806640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_WTDGVWFCSW_	REV__ENST00000155926.8_1_2:12882275-12882671:+|nuORF	14.864876125193954	0.4201028297492154	3				NaN	NaN	0	NaN	1087	2914	3996
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4015	16.593	NaN	4113.7	30	0	1087.8	0.142	+			46110	VDGKTIKAQ	9	57	480.2797213520318	958.5448897708636	2	480.2792053222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VDGKTIKAQ_	ENSG00000103769|ENST00000261890|RAB11A;ENSG00000185236|ENST00000328024|RAB11B;ENST00000598706.1_1_19:8455252-8465174:+|nuORF;nc|ENSG00000103769|P62491-2|RAB11A;nc|ENSG00000185236|Q15907-2|RAB11B;RAB11A|p.I53T|1|0.1|ENSG00000103769|chr15:65877449-65877449|T/C|missense_variant	107.00750918261382	0.032051501805654005	3				NaN	NaN	0	NaN	1096	2917	4014
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4022	16.611	NaN	2441.3	30	0	406.06	0.214	+			36886	SIGPVGKSK	9	52	436.7638804654588	871.5132079977176	2	436.763427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIGPVGKSK_	ENSG00000064787|ENST00000688948|BCAS1;nc|ENSG00000064787|O75363-2|BCAS1;nc|ENSG00000064787|O75363|BCAS1	53.08895987439943	0.27122541748218487	3				NaN	NaN	0	NaN	1100	2920	4021
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4023	16.614	NaN	1248.3	30	0	336.6	0.034			+	24645	LGTASLRAK	9	37	458.78205554311245	NaN	0	458.7828063964844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LGTASLRAK_	REV__ENST00000554578.5_1_12:57637331-57638104:-|nuORF	47.657333605630114	0.2228375344433429	3				NaN	NaN	0	NaN	1101	2920	4021
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4037	16.652	NaN	4654	30	0	1322.6	0.214	+			3029	ASFDKAKLKK	10	60	568.3455357774781	1134.676518621756	2	568.3452758789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASFDKAKLKK_	ENSG00000034510|ENST00000233143|TMSB10	90.14881205920913	0.1302219035121668	3				NaN	NaN	0	NaN	1109	2926	4036
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4038	16.656	NaN	7945.1	30	0	1896.1	0.035	+			35628	SCCPVGCSKC	10	63	522.1917945170335	1042.3690361008669	2	522.1927490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SCC(Carbamidomethyl (C))PVGCSKC_	ENSG00000198417|ENST00000334350|MT1F;ENST00000564295.1_1_16:56692857-56693073:+|nuORF	54.722347961057174	0.4138398245444204	3				NaN	NaN	0	NaN	1110	2926	4036
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4047	16.677	NaN	1809	30	0	283.14	0.214				-1	TEPIVPELCI	10	39	390.87268456412926	NaN	0	390.87286376953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_TEPIVPELC(Carbamidomethyl (C))I_	ENSG00000153107|ENST00000341068|ANAPC1;ENST00000426186.1_3_2:87098444-87121919:+|nuORF;ENST00000447760.1_1_2:106986223-106992976:+|nuORF	36.446750945000026	0.3805027428805705	3				NaN	NaN	0	NaN	1116	2929	4046
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4048	16.681	NaN	2487	30	0	634.62	0.106	+			3030	ASFDKAKLKK	10	36	379.23263470844256	1134.6760747255278	3	379.2322692871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASFDKAKLKK_	ENSG00000034510|ENST00000233143|TMSB10	29.170058357718403	0.6416167986984785	3				NaN	NaN	0	NaN	1117	2929	4046
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4049	16.683	NaN	1402.3	30	0	286.24	0.106	+			14220	GSSPTVLKK	9	41	458.7770110681485	915.539469203097	2	458.7767639160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GSSPTVLKK_	ENSG00000106009|ENST00000340611|BRAT1	40.77816245573522	0.41113185337114944	3				NaN	NaN	0	NaN	1118	2929	4046
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4050	16.684	NaN	773.36	30	0	76.626	0.03	+			19510	KAVGAIGG	8	49	336.7054714221299	NaN	0	336.7052917480469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KAVGAIGG_	tr|U7T2T6|U7T2T6_FUSNUMATEfamilymultidrugresistanceproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00453PE=4SV=1	10.184766708764876	1.7418937515398478	3				NaN	NaN	0	NaN	1119	2929	4046
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4059	16.704	NaN	1210.8	30	0	204.13	0.145			+	9944	ERAILRSGDL	10	32	377.2154448184416	1128.6245050555249	3	377.21551513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ERAILRSGDL_	REV__ENSG00000218336|ENST00000511685|TENM3;REV__TENM3|p.G1986Dfs*16|1|0.07|ENSG00000218336|chr4:182792628-182792629|-/ATGGA|frameshift_variant;REV__TENM3|p.Y2250Mfs*4|1|0.24|ENSG00000218336|chr4:182793414-182793414|T/-|frameshift_variant	15.641811463095205	0.7369665665077569	3				NaN	NaN	0	NaN	1125	2932	4058
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4075	16.749	NaN	1064.1	30	0	136.15	0.214	+			40320	STSTSIKVK	9	38	475.7795861675281	949.5446194018563	2	475.7793884277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STSTSIKVK_	ENSG00000135974|ENST00000258457|C2orf49;nc|nan|Q9BVC5-2|C2orf49	45.97224482568171	0.3502073465782774	3				NaN	NaN	0	NaN	1135	2938	4074
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4076	16.753	NaN	908.4	30	0	130.27	0.035	+			21300	KLSGIETRI	9	36	508.8075866699219	NaN	0	508.8075866699219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KLSGIETRI_	tr|U7SRP2|U7SRP2_FUSNUGlucokinaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01608PE=4SV=1	29.170058357718403	0.3302935627494407	3				NaN	NaN	0	NaN	1136	2938	4074
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4099	16.807	NaN	5998.3	30	0	1973	0.211			+	-1	HSKFEDMWVEA	11	47	697.8046966725313	1393.5948404118626	2	697.8056030273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_HSKFEDM(Oxidation (M))WVEA_	REV__ENSG00000110328|ENST00000227756|GALNT18	22.579656572578934	0.7529490144093228	3				NaN	NaN	0	NaN	1153	2944	4098
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4100	16.81	NaN	2075.5	30	0	221.53	0.036	+			41973	SVYAGGRGPAK	11	52	531.7882135030494	1061.5618740728987	2	531.7877807617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVYAGGRGPAK_	ENST00000296473.7_3_3:49967084-49967270:-|nuORF	63.53385203322761	0.2919106290768168	3				NaN	NaN	0	NaN	1154	2944	4098
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4111	16.835	NaN	3748.1	30	0	509.94	0.143	+			23077	KVVDLANKK	9	63	507.819222626761	1013.623892320322	2	507.8189697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVVDLANKK_	ENSG00000104413|ENST00000433389|ESRP1;ESRP1|p.L333Sfs*55|1|0.35|ENSG00000104413|chr8:94668009-94668009|G/-|frameshift_variant;ESRP1|p.N512Hfs*7|2|0.33|ENSG00000104413|chr8:94674383-94674384|AA/-|frameshift_variant;ESRP1|p.N512Kfs*8|1|0.48|ENSG00000104413|chr8:94674382-94674383|-/A|frameshift_variant;ESRP1|p.N512Tfs*2|2|0.36|ENSG00000104413|chr8:94674383-94674383|A/-|frameshift_variant;nc|ENSG00000104413|Q6NXG1-2|ESRP1;nc|ENSG00000104413|Q6NXG1-3|ESRP1;nc|ENSG00000104413|Q6NXG1-4|ESRP1;nc|ENSG00000104413|Q6NXG1-5|ESRP1	68.62578634547417	0.14673074753754126	3				NaN	NaN	0	NaN	1162	2947	4110
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4119	16.855	NaN	731.49	30	0	144.85	0.142	+			20222	KELKVENP	8	32	478.7735900878906	NaN	0	478.7735900878906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KELKVENP_	tr|U7SPA0|U7SPA0_FUSNUMethionine--tRNAligaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=metGPE=3SV=1	23.04248740728303	1.7418937515398478	3				NaN	NaN	0	NaN	1167	2950	4118
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4125	16.873	NaN	2261.3	30	0	422.06	0.214				-1	ACGKSFCH	8	39	455.18892386735706	908.3632948015141	2	455.1884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_ACGKSFC(Carbamidomethyl (C))H_	ENSG00000198105|ENST00000395867|ZNF248	26.79610172149135	0.7524337208463756	3				NaN	NaN	0	NaN	1170	2953	4124
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4126	16.877	NaN	1471.4	30	0	199.41	0.106	+			40964	SVGASYDLDW	10	41	556.7471157447262	1111.4796785562523	2	556.7474365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVGASYDLDW_	tr|U7SU20|U7SU20_FUSNUTrimericautotransporteradhesinYadA-likeC-terminalmembraneanchordomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01280PE=4SV=1	32.81241826257853	0.6118718159329168	3				NaN	NaN	0	NaN	1171	2953	4124
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4127	16.879	NaN	1259.4	30	0	148.34	0.106				-1	AGGDLGWMAE	10	40	511.71755225827957	1021.4205515833592	2	511.71783447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_AGGDLGWM(Oxidation (M))AE_	ENSG00000182087|ENST00000356663|TMEM259;ENST00000592618.5_1_19:1010351-1011343:-|nuORF	20.94693142431847	0.7087701759873708	3				NaN	NaN	0	NaN	1172	2953	4124
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4128	16.88	NaN	1576.2	30	0	133.22	0.03			+	13119	GGGKAGAF	8	46	332.674476355928	663.334399778656	2	332.67437744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GGGKAGAF_	REV__ENST00000424404.1_1_7:121947107-121947290:+|nuORF	4.6817480819748125	0.7764044737779935	3				NaN	NaN	0	NaN	1173	2953	4124
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4147	16.926	NaN	2978.4	30	0	441.58	0.213	+			49157	VVMGKQQSKLK	11	49	623.3706665039062	NaN	0	623.3706665039062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVMGKQQSKLK_	ENSG00000148225|ENST00000374193|WDR31;nc|ENSG00000148225|Q8NA23-2|WDR31	70.72838890466396	0.12980303664281193	3				NaN	NaN	0	NaN	1186	2959	4146
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4148	16.929	NaN	1987.5	30	0	492.25	0.037	+			22122	KSNSYRHRE	9	37	588.7984316055472	NaN	0	588.79931640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KSNSYRHRE_	ENSG00000186086|ENST00000495380|NBPF6;ENSG00000196427|ENST00000415641|NBPF4;nc|ENSG00000186086|Q5VWK0-2|NBPF6;nc|ENSG00000243967|Q86XG9|NBPF5P	47.657333605630114	0.2228375344433429	3				NaN	NaN	0	NaN	1187	2959	4146
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4163	16.97	NaN	2035	30	0	380.22	0.214	+			21562	KPAILTHER	9	50	532.81494140625	NaN	0	532.81494140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KPAILTHER_	ENSG00000083807|ENST00000263093|SLC27A5;ENST00000593745.1_1_19:59021097-59021388:-|nuORF;nc|ENSG00000083807|Q9Y2P5-2|SLC27A5	32.81241826257853	0.3119040447479903	3				NaN	NaN	0	NaN	1196	2965	4162
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4164	16.974	NaN	1886	30	0	288.64	0.035				-1	 	0	54	497.7516023073679	993.4886516815358	2	497.7505187988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1197	2965	4162
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4174	16.997	NaN	5455.3	30	0	1152.3	0.214	+			5088	ATSNVHMVK	9	71	493.7577478827952	NaN	0	493.7579345703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSNVHMVK_	ENSG00000197256|ENST00000586659|KANK2;ENST00000590400.1_1_19:11303345-11305238:-|nuORF;KANK2|p.P430Rfs*5|1|0.23|ENSG00000197256|chr19:11178681-11178681|G/-|frameshift_variant;nc|ENSG00000197256|Q63ZY3-2|KANK2;nc|ENSG00000197256|Q63ZY3-3|KANK2	66.96192283764107	0.11962625698446946	3				NaN	NaN	0	NaN	1204	2968	4173
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4175	17.001	NaN	1730.6	30	0	314.37	0.106			+	25677	LRFHNRRQ	8	32	563.8186341973219	NaN	0	563.8184204101562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LRFHNRRQ_	REV__ENST00000334529.9_1_3:112184412-112184451:-|nuORF	20.481830146152948	1.741893751539848	3				NaN	NaN	0	NaN	1205	2968	4173
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4176	17.003	NaN	1431.1	30	0	262.63	0.106			+	21256	KLLHITSHI	9	44	531.3268007763035	NaN	0	531.3272094726562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KLLHITSHI_	REV__ENSG00000133789|ENST00000318950|SWAP70;REV__ENST00000524817.5_1_11:9685687-9762009:+|nuORF;REV__ENST00000534562.1_1_11:9749605-9771962:+|nuORF	25.450171626174864	0.34907449758287085	3				NaN	NaN	0	NaN	1206	2968	4173
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4177	17.005	NaN	1591.1	30	0	260.21	0.036	+			25235	LNFIYQKE	8	38	527.7833862304688	NaN	0	527.7833862304688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LNFIYQKE_	POLR1B|p.R241Q|1|0.14|ENSG00000125630|chr2:112550962-112550962|G/A|missense_variant	24.20275056022122	1.7418937515398478	3				NaN	NaN	0	NaN	1207	2968	4173
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4188	17.028	NaN	22812	30	0	8292.3	0.214				-1	GVMASAVM	8	51	391.18257827635404	780.3506036195081	2	391.1822204589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_GVM(Oxidation (M))ASAVM_	STAB1|p.P978Lfs*57|1|0.35|ENSG00000010327|chr3:52512385-52512385|C/-|frameshift_variant	29.841539824830324	0.7289191502596711	3				NaN	NaN	0	NaN	1215	2971	4187
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4189	17.032	NaN	1436	30	0	262.51	0.106	+			25436	LPPENPSR	8	38	455.2431168543525	908.471680775505	2	455.24249267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LPPENPSR_	ENST00000261716.7_1_17:27818831-27822603:+|nuORF	51.33545320467046	0.5859736979383976	3				NaN	NaN	0	NaN	1216	2971	4187
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4190	17.034	NaN	2541.1	30	0	307.53	0.036	+			27507	MMRMTMSIP	9	51	557.2479858398438	NaN	0	557.2479858398438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))MRMTMSIP_	ENST00000481928.1_1_2:232577176-232577583:+|nuORF	40.77816245573522	0.2702456086868081	3				NaN	NaN	0	NaN	1217	2971	4187
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4202	17.059	NaN	3660.4	30	0	524.52	0.214	+			50712	YEFTEEAQ	8	50	508.71419281089914	1015.4138326885983	2	508.71453857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YEFTEEAQ_	ENST00000261653.10_1_12:131276234-131276321:-|nuORF	38.80614096846853	0.6637206697844082	3				NaN	NaN	0	NaN	1226	2974	4201
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4203	17.063	NaN	1456.9	30	0	236.13	0.036			+	6942	CPGKMDSGRL	10	44	532.25439453125	NaN	0	532.25439453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_CPGKMDSGRL_	REV__ENST00000268704.6_1_16:89623796-89624147:+|nuORF	31.529811441608018	0.39664753963064203	3				NaN	NaN	0	NaN	1227	2974	4201
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4212	17.082	NaN	2555.5	30	0	360.34	0.214	+			39429	STDVSHCVK	9	54	488.2318134491537	974.4490739651075	2	488.2315979003906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STDVSHCVK_	ENSG00000166750|ENST00000299977|SLFN5;nc|ENSG00000166750|Q08AF3-2|SLFN5;SLFN5|p.P698Lfs*21|1|0.46|ENSG00000166750|chr17:35265300-35265300|C/-|frameshift_variant;SLFN5|p.Q524Sfs*11|1|0.73|ENSG00000166750|chr17:35264609-35264609|C/-|frameshift_variant	115.49404669440601	0.023927554121326553	3				NaN	NaN	0	NaN	1233	2977	4211
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4213	17.086	NaN	1637.2	30	0	729.67	0.106			+	45291	TVRPPPIGSA	10	34	332.1943663500092	993.5612696502276	3	332.1941833496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVRPPPIGSA_	REV__BOC|p.Q445Nfs*66|1|0.29|ENSG00000144857|chr3:113274468-113274468|G/-|frameshift_variant;REV__ENSG00000144857|ENST00000682979|BOC;REV__nc|ENSG00000144857|Q9BWV1|BOC	14.864876125193954	0.7409144161711139	3				NaN	NaN	0	NaN	1234	2977	4211
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4214	17.088	NaN	932.2	30	0	117.21	0.106	+			9093	EGIYERPV	8	34	481.74884033203125	NaN	0	481.74884033203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EGIYERPV_	ENSG00000072682|ENST00000360568|P4HA2;nc|ENSG00000072682|O15460|P4HA2	37.15910966729921	1.7418937515398478	3				NaN	NaN	0	NaN	1235	2977	4211
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4215	17.09	NaN	2249.7	30	0	455.04	0.106			+	46924	VIYACWNKN	9	51	555.775484292314	NaN	0	555.7752685546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VIYACWNKN_	REV__ENSG00000132205|ENST00000254528|EMILIN2	42.47446043378293	0.25855550551448697	3				NaN	NaN	0	NaN	1236	2977	4211
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4216	17.092	NaN	2399.3	30	0	344.08	0.036			+	31434	QKPNACVSLK	10	53	544.2995320932455	1086.5845112532909	2	544.2994995117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QKPNACVSLK_	REV__ENSG00000115009|ENST00000358813|CCL20;REV__nc|ENSG00000115009|P78556-2|CCL20	67.49366992349736	0.29779660154124327	3				NaN	NaN	0	NaN	1237	2977	4211
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4226	17.113	NaN	1427.7	30	0	235.39	0.214			+	-1	KIAKQVCQQ	9	38	551.8044248390495	NaN	0	551.8042602539062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_KIAKQVC(Carbamidomethyl (C))QQ_	REV__ENSG00000170855|ENST00000546954|TRIAP1	23.04248740728303	0.3589936788096251	3				NaN	NaN	0	NaN	1244	2980	4225
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4227	17.117	NaN	1881.7	30	0	445.68	0.036	+			31980	QRCKKLKR	8	44	530.3302612304688	NaN	0	530.3302612304688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QRCKKLKR_	ENST00000233813.4_1_2:217541158-217541338:-|nuORF	27.882242232435846	1.7418937515398478	3				NaN	NaN	0	NaN	1245	2980	4225
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4240	17.143	NaN	13991	30	0	5506.1	0.214			+	22027	KSHRSLMP	8	64	478.26121528311165	954.5078776330233	2	478.2608947753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSHRSLMP_	REV__PLOD3|p.G422S|1|0.3|ENSG00000106397|chr7:101211685-101211685|C/T|missense_variant	45.9519527083369	0.6193794311207887	3				NaN	NaN	0	NaN	1255	2983	4239
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4241	17.147	NaN	11392	30	0	1948.6	0.106			+	35749	SDTNLRLK	8	67	473.76903819531213	NaN	0	473.7690124511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SDTNLRLK_	REV__ENST00000475716.5_1_20:17941944-17942804:-|nuORF	99.37495909608758	1.7418937515398478	3				NaN	NaN	0	NaN	1256	2983	4239
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4242	17.149	NaN	8213.7	30	0	2103.5	0.106			+	9388	EKEEECFEE	9	56	586.2282437523512	1170.4419345715023	2	586.228759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EKEEECFEE_	REV__ENSG00000151304|ENST00000339397|SRFBP1;REV__SRFBP1|p.Y270Lfs*8|1|0.12|ENSG00000151304|chr5:122020539-122020540|-/T|frameshift_variant	37.81151784470057	0.4459294069877048	3				NaN	NaN	0	NaN	1257	2983	4239
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4243	17.151	NaN	3587.5	30	0	943.93	0.106	+			1777	AICQYAIQS	9	43	498.74412384348875	995.4736947537775	2	498.7435607910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AICQYAIQS_	ENSG00000187105|ENST00000553558|HEATR4;HEATR4|p.A549T|1|0.11|ENSG00000187105|chr14:73509387-73509387|C/T|missense_variant	26.69291269510374	0.5537881896960711	3				NaN	NaN	0	NaN	1258	2983	4239
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4244	17.152	NaN	1333	30	0	189.52	0.034	+			41430	SVNGKVLSK	9	41	466.28199420460203	NaN	0	466.2825012207031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVNGKVLSK_	ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2;NOMO1|p.P1102Hfs*42|1|0.36|ENSG00000103512|chr16:14886838-14886838|C/-|frameshift_variant;NOMO1|p.P141Sfs*12|1|0.33|ENSG00000103512|chr16:14846592-14846593|-/AG|frameshift_variant	51.19269402634007	0.19847346126499396	3				NaN	NaN	0	NaN	1259	2983	4239
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4253	17.172	NaN	4071.6	30	0	1956.6	0.214	+			29425	PCCQKKLR	8	45	488.26409912109375	NaN	0	488.26409912109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PCCQKKLR_	UBR5|p.E2121Kfs*28|1|0.39|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant	35.200714571348534	1.7418937515398478	3				NaN	NaN	0	NaN	1265	2986	4252
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4254	17.176	NaN	2199.5	30	0	880.73	0.106				-1	MNVLTSYV	8	28	492.7374267578125	NaN	0	492.7374267578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))M(Oxidation (M))NVLTSYV_	ENST00000224140.5_1_9:135218093-135221659:-|nuORF	14.664097394203935	1.7418937515398478	3				NaN	NaN	0	NaN	1266	2986	4252
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4255	17.178	NaN	4965.9	30	0	978.79	0.106				-1	SACHKYFEK	9	46	585.2739374141368	1168.5333218950734	2	585.2740478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SAC(Carbamidomethyl (C))HKYFEK_	ENSG00000163993|ENST00000296370|S100P;ENST00000513778.1_1_4:6695618-6698766:+|nuORF;S100P|p.T82M|1|0.3|ENSG00000163993|chr4:6696999-6696999|C/T|missense_variant	36.446750945000026	0.4619375763483977	3				NaN	NaN	0	NaN	1267	2986	4252
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4256	17.179	NaN	5948.5	30	0	1859.8	0.106				-1	FMICCDCCE	9	34	627.1903686523438	NaN	0	627.1903686523438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	3 Carbamidomethyl (C),Oxidation (M)	_FM(Oxidation (M))IC(Carbamidomethyl (C))CDC(Carbamidomethyl (C))C(Carbamidomethyl (C))E_	DIDO1|p.R287C|1|0.72|ENSG00000101191|chr20:62910001-62910001|G/A|missense_variant	3.9852391341785527	0.40727630907727536	3				NaN	NaN	0	NaN	1268	2986	4252
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4257	17.181	NaN	7126.5	30	0	1314.6	0.106			+	-1	CGEECGESFCG	11	27	646.2023315429688	NaN	0	646.2023315429688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	3 Carbamidomethyl (C)	_C(Carbamidomethyl (C))GEEC(Carbamidomethyl (C))GESFC(Carbamidomethyl (C))G_	REV__nc|ENSG00000197558|A2VEC9|SSPOP	5.55782384252955	0.456735970842152	3				NaN	NaN	0	NaN	1269	2986	4252
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4258	17.183	NaN	4718.2	30	0	816.01	0.106				-1	CHSGCAHCFSS	11	32	598.2098999023438	NaN	0	598.2098999023438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_CHSGC(Carbamidomethyl (C))AHCFSS_	ENST00000252711.6_1_2:240900175-240900307:-|nuORF	9.705651100619752	0.456735970842152	3				NaN	NaN	0	NaN	1270	2986	4252
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4259	17.185	NaN	3242.1	30	0	613.78	0.034	+			10041	ESCFDTSK	8	46	458.6897945299404	915.3650361266808	2	458.68951416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ESCFDTSK_	ENSG00000158008|ENST00000374280|EXTL1;EXTL1|p.P388Qfs*35|1|0.43|ENSG00000158008|chr1:26031188-26031188|C/-|frameshift_variant	38.80614096846853	0.6637206697844082	3				NaN	NaN	0	NaN	1271	2986	4252
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4273	17.214	NaN	2371.4	30	0	435.96	0.214	+			12284	GAYDGKYEK	9	47	515.7456456003648	1029.4767382675295	2	515.745849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GAYDGKYEK_	ENSG00000196981|ENST00000330689|WDR5B;WDR5B|p.P136Efs*12|1|0.03|ENSG00000196981|chr3:122415124-122415125|-/CTCT|frameshift_variant	65.46538089061403	0.16805504838372562	3				NaN	NaN	0	NaN	1282	2989	4272
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4274	17.218	NaN	2579	30	0	432	0.106	+			40773	SVDLPKHAK	9	61	497.788027779536	993.561502625872	2	497.7873229980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVDLPKHAK_	ENSG00000095203|ENST00000374566|EPB41L4B;nc|ENSG00000095203|Q9H329-2|EPB41L4B	110.11987700582712	0.028875675806141952	3				NaN	NaN	0	NaN	1283	2989	4272
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4275	17.22	NaN	3069.2	30	0	614.79	0.106	+			5947	AVLKHIENK	9	59	526.3162682588986	1050.6179835845971	2	526.316162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVLKHIENK_	ENSG00000160695|ENST00000621676|VPS11;nc|ENSG00000160695|Q9H270|VPS11	104.01359247289065	0.03510646158778409	3				NaN	NaN	0	NaN	1284	2989	4272
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4276	17.222	NaN	3403.9	30	0	520.95	0.106	+			32260	QTLPGVDIQQ	10	68	549.79366979781	1097.57278666242	2	549.7943115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QTLPGVDIQQ_	ENSG00000008226|ENST00000308059|DLEC1;nc|ENSG00000008226|Q9Y238-3|DLEC1	63.53385203322761	0.33370026130094593	3				NaN	NaN	0	NaN	1285	2989	4272
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4277	17.224	NaN	1179.8	30	0	919.95	0.106				-1	NFCLGYMA	8	20	467.6944885253906	NaN	0	467.6944885253906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_NFCLGYM(Oxidation (M))A_	PMM1|p.S114G|1|0.35|ENSG00000100417|chr22:41584315-41584315|T/C|missense_variant	9.47055586587303	1.741893751539848	3				NaN	NaN	0	NaN	1286	2989	4272
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4278	17.225	NaN	1706.6	30	0	348.82	0.036				-1	REAPSECVC	9	28	554.2321166992188	NaN	0	554.2321166992188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Carbamidomethyl (C)	_REAPSEC(Carbamidomethyl (C))VC(Carbamidomethyl (C))_	ENSG00000050767|ENST00000390654|COL23A1;nc|ENSG00000050767|Q86Y22-2|COL23A1	15.641811463095205	0.38404136392510424	3				NaN	NaN	0	NaN	1287	2989	4272
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4289	17.251	NaN	2936.2	30	0	478.37	0.215				-1	MLQSVEDGK	9	56	511.74563825220577	1021.4767235712116	2	511.74566650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))LQSVEDGK_	ENSG00000188738|ENST00000424728|FSIP2;FSIP2|p.D5579Mfs*10|1|0.09|ENSG00000188738|chr2:185806029-185806029|A/-|frameshift_variant;FSIP2|p.K6152Rfs*27|1|0.43|ENSG00000188738|chr2:185807758-185807758|A/-|frameshift_variant;FSIP2|p.K6528Nfs*5|1|0.33|ENSG00000188738|chr2:185808884-185808884|A/-|frameshift_variant;FSIP2|p.V5734Yfs*24|2|0.23|ENSG00000188738|chr2:185806499-185806499|A/-|frameshift_variant;FSIP2|p.V6322*|1|0.42|ENSG00000188738|chr2:185808265-185808265|A/-|frameshift_variant	64.20726635412375	0.17854274437659667	3				NaN	NaN	0	NaN	1295	2992	4288
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4290	17.255	NaN	1330.6	30	0	153.18	0.106	+			15535	GVDGSVYKK	9	42	476.7584993959996	951.5024458587992	2	476.75860595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GVDGSVYKK_	ENSG00000159399|ENST00000290573|HK2;ENST00000447818.2_1_X:79828255-79829731:-|nuORF	90.36981228632155	0.0638227155548745	3				NaN	NaN	0	NaN	1296	2992	4288
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4291	17.257	NaN	1335.6	30	0	541.52	0.036			+	-1	QPGCCSSFCS	10	24	538.1879435908395	NaN	0	538.187744140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_QPGC(Carbamidomethyl (C))CSSFCS_	REV__ENST00000591360.1_1_18:56204962-56205301:+|nuORF	15.641811463095205	0.4201028297492154	3				NaN	NaN	0	NaN	1297	2992	4288
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4303	17.282	NaN	4256.8	30	0	763.06	0.214	+			49144	VVMADPKGK	9	57	472.76559184723936	943.5166307612787	2	472.7649841308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVMADPKGK_	ENSG00000137038|ENST00000358227|DMAC1;ENST00000469050.1_1_9:7798575-7833931:-|nuORF;ENST00000484082.1_1_9:7798575-7800059:-|nuORF;nc|ENSG00000137038|Q96GE9|DMAC1	47.657333605630114	0.33044192980041115	3				NaN	NaN	0	NaN	1306	2995	4302
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4304	17.286	NaN	2495.6	30	0	444.5	0.036			+	42042	SWLKLLIQV	9	51	550.34619140625	NaN	0	550.34619140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SWLKLLIQV_	REV__ENSG00000215114|ENST00000399598|UBXN2B;REV__ENST00000451057.1_1_7:156990296-156991186:-|nuORF	18.262085536374414	0.37517301184500873	3				NaN	NaN	0	NaN	1307	2995	4302
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4316	17.311	NaN	3691.6	30	0	1510.9	0.143			+	41	AAALLRSAAY	10	34	336.19439706139946	1005.5613617843984	3	336.19403076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAALLRSAAY_	REV__ENSG00000155465|ENST00000674313|SLC7A7	25.450171626174864	0.6719948968573018	3				NaN	NaN	0	NaN	1316	2998	4315
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4330	17.342	NaN	5245.8	30	0	1059.5	0.143	+			4259	ATGESIAVKK	10	73	502.29330895247875	1002.5720649717575	2	502.292724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATGESIAVKK_	DCLRE1C|p.R685Efs*6|1|0.37|ENSG00000152457|chr10:14908434-14908434|T/-|frameshift_variant;ENSG00000152457|ENST00000378278|DCLRE1C;nc|ENSG00000152457|Q96SD1-2|DCLRE1C;nc|ENSG00000152457|Q96SD1-3|DCLRE1C	112.2953585152457	0.0411829880542106	3				NaN	NaN	0	NaN	1327	3001	4329
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4341	17.369	NaN	2207.3	30	0	358.54	0.214			+	15648	GVLLMRLDE	9	52	523.2910591044172	1044.5675652756343	2	523.2913818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVLLMRLDE_	REV__ENSG00000154237|ENST00000388948|LRRK1;REV__ENST00000525284.5_1_15:101565016-101602660:+|nuORF;REV__ENST00000531270.5_1_15:101565016-101589971:+|nuORF	31.954861631926434	0.5046124803899898	3				NaN	NaN	0	NaN	1335	3004	4340
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4342	17.373	NaN	2938.9	30	0	598.9	0.106	+			44702	TTKHYVIIHQ	10	51	620.3438522112499	1238.6731514892997	2	620.3438110351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTKHYVIIHQ_	ENSG00000256087|ENST00000221315|ZNF432	29.550750289552195	0.6385079145554603	3				NaN	NaN	0	NaN	1336	3004	4340
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4343	17.375	NaN	1011.4	30	0	146.85	0.106	+			7866	DRGAPGLAL	9	33	435.245361328125	NaN	0	435.245361328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DRGAPGLAL_	ENSG00000007047|ENST00000262891|MARK4;ENST00000588621.5_1_19:45767955-45791108:+|nuORF;nc|ENSG00000007047|Q96L34-2|MARK4	19.359975847455235	0.3714571876404798	3				NaN	NaN	0	NaN	1337	3004	4340
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4344	17.376	NaN	1934.9	30	0	283.5	0.037			+	43741	TLARLEQLSP	10	36	564.3265079944443	1126.6384630556886	2	564.3264770507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TLARLEQLSP_	REV__ENSG00000130827|ENST00000369682|PLXNA3;REV__PLXNA3|p.H668Tfs*26|1|0.21|ENSG00000130827|chrX:154464823-154464823|C/-|frameshift_variant	21.68575002086885	0.7027366847906487	3				NaN	NaN	0	NaN	1338	3004	4340
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4351	17.394	NaN	2830.3	30	0	449.37	0.214	+			3173	ASIQPSKVGK	10	51	507.8008328413757	1013.5871127495515	2	507.8002624511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASIQPSKVGK_	ENSG00000167962|ENST00000562103|ZNF598;ENST00000565396.5_1_16:2048964-2050409:-|nuORF;nc|ENSG00000167962|Q86UK7-2|ZNF598;nc|ENSG00000167962|Q86UK7-3|ZNF598;nc|ENSG00000167962|Q86UK7-4|ZNF598;nc|ENSG00000167962|Q86UK7|ZNF598;ZNF598|p.P646Afs*20|1|0.5|ENSG00000167962|chr16:1999075-1999076|-/G|frameshift_variant	69.6276240434122	0.2803623802747859	3				NaN	NaN	0	NaN	1342	3007	4350
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4352	17.398	NaN	1849.1	30	0	645.46	0.036			+	45864	VALYVYKQK	9	36	556.328857421875	NaN	0	556.328857421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VALYVYKQK_	REV__LRRC42|p.C416Y|1|0.32|ENSG00000116212|chr1:53967899-53967899|G/A|missense_variant	18.324413293986947	0.3749620627292244	3				NaN	NaN	0	NaN	1343	3007	4350
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4373	17.446	NaN	2245.6	30	0	444.22	0.214	+			42790	TEAKIKQKL	9	47	529.8320271005902	NaN	0	529.8320922851562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEAKIKQKL_	ENSG00000072501|ENST00000322213|SMC1A;SMC1A|p.R426W|1|0.44|ENSG00000072501|chrX:53409482-53409482|G/A|missense_variant	82.7504851949679	0.061958946529908215	3				NaN	NaN	0	NaN	1358	3013	4372
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4374	17.45	NaN	2222.5	30	0	770.03	0.034			+	47329	VPALVTSQK	9	39	471.7848347422994	941.5551165513988	2	471.7840881347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VPALVTSQK_	REV__ENSG00000134453|ENST00000379888|RBM17	29.14955571784316	0.5308295550522326	3				NaN	NaN	0	NaN	1359	3013	4372
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4384	17.473	NaN	2411.6	30	0	489.75	0.214			+	20732	KGTHVGIRL	9	49	490.8038253800898	979.5930978269796	2	490.8031311035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KGTHVGIRL_	REV__nc|ENSG00000159899|P20594-2|NPR2	49.44154591367651	0.3095138337212152	3				NaN	NaN	0	NaN	1366	3016	4383
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4385	17.477	NaN	3116.2	30	0	390.66	0.037	+			40916	SVFQQGMKNK	10	64	591.8003821592637	1181.5862113853273	2	591.7999877929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_SVFQQGM(Oxidation (M))KNK_	ENSG00000018625|ENST00000361216|ATP1A2;ENSG00000105409|ENST00000648268|ATP1A3;ENSG00000163399|ENST00000295598|ATP1A1;ENST00000479960.1_1_1:116943772-116944278:+|nuORF;nc|ENSG00000105409|P13637-2|ATP1A3;nc|ENSG00000105409|P13637-3|ATP1A3;nc|ENSG00000163399|P05023-3|ATP1A1;nc|ENSG00000163399|P05023-4|ATP1A1	71.87747018426188	0.26198133118427214	3				NaN	NaN	0	NaN	1367	3016	4383
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4398	17.504	NaN	6797.8	30	0	1287.8	0.145	+			32067	QSAPKESFPTL	11	78	602.8145767658842	1203.6146005985684	2	602.8147583007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QSAPKESFPTL_	ENST00000476146.5_1_20:34043137-34046179:+|nuORF	58.62960593111931	0.3356877741313683	3				NaN	NaN	0	NaN	1377	3019	4397
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4411	17.533	NaN	3635.5	30	0	888.31	0.214	+			15218	GTSSSAASSLK	11	55	498.2540271321432	994.4935013310865	2	498.2533874511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTSSSAASSLK_	ARID1A|p.F2141Sfs*59|5|0.26|ENSG00000117713|chr1:26780313-26780313|C/-|frameshift_variant;ARID1A|p.K1161Sfs*19|1|0.29|ENSG00000117713|chr1:26772573-26772573|A/-|frameshift_variant;ARID1A|p.M1564Hfs*8|1|0.18|ENSG00000117713|chr1:26774910-26774911|-/C|frameshift_variant;ARID1A|p.N1475Tfs*6|1|0.36|ENSG00000117713|chr1:26774648-26774648|A/-|frameshift_variant;ARID1A|p.P1115Qfs*46|1|0.32|ENSG00000117713|chr1:26771260-26771260|C/-|frameshift_variant;ARID1A|p.P1326Rfs*155|1|0.15|ENSG00000117713|chr1:26773685-26773685|C/-|frameshift_variant;ARID1A|p.P1406Rfs*37|1|0.42|ENSG00000117713|chr1:26774444-26774448|CCCCA/-|frameshift_variant;ARID1A|p.P1568Lfs*44|1|0.14|ENSG00000117713|chr1:26774926-26774926|C/-|frameshift_variant;ARID1A|p.P1575Hfs*37|1|0.38|ENSG00000117713|chr1:26774947-26774947|C/-|frameshift_variant;ARID1A|p.P2114Rfs*21|1|0.46|ENSG00000117713|chr1:26780236-26780236|C/-|frameshift_variant;ARID1A|p.V2244Gfs*34|1|0.31|ENSG00000117713|chr1:26780626-26780627|-/G|frameshift_variant;ENSG00000049618|ENST00000636930|ARID1B;ENSG00000117713|ENST00000324856|ARID1A;nc|ENSG00000049618|Q8NFD5-1|ARID1B;nc|ENSG00000049618|Q8NFD5-2|ARID1B;nc|ENSG00000049618|Q8NFD5|ARID1B;nc|ENSG00000117713|O14497-2|ARID1A;nc|ENSG00000117713|O14497-3|ARID1A	92.23892857375223	0.08960911027004287	3				NaN	NaN	0	NaN	1387	3022	4410
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4412	17.537	NaN	2646.7	30	0	260.83	0.106	+			13734	GQAVALRAK	9	52	457.2829429287029	912.5513329242058	2	457.2822570800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GQAVALRAK_	ENSG00000159692|ENST00000382952|CTBP1;ENST00000511907.1_1_4:1208072-1210006:-|nuORF;nc|ENSG00000159692|Q13363|CTBP1	76.7741389293348	0.11149722112137898	3				NaN	NaN	0	NaN	1388	3022	4410
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4413	17.539	NaN	1777.9	30	0	305.88	0.037			+	24466	LGGARERRSE	10	41	565.8065795898438	NaN	0	565.8065795898438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LGGARERRSE_	REV__ENST00000588238.1_1_19:4445497-4445788:-|nuORF	19.262678746197807	0.4201028297492154	3				NaN	NaN	0	NaN	1389	3022	4410
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4430	17.574	NaN	4328.2	30	0	617.02	0.214	+			23148	KVYDKAINR	9	56	553.8197458624614	1105.6249387917228	2	553.8197021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVYDKAINR_	ENSG00000164190|ENST00000282516|NIPBL;ENST00000514335.1_1_5:37051847-37064632:+|nuORF;nc|ENSG00000164190|Q6KC79-2|NIPBL;NIPBL|p.I2776Lfs*3|1|0.17|ENSG00000164190|chr5:37064797-37064797|A/-|frameshift_variant	139.38205640894643	0.01076996779551382	3				NaN	NaN	0	NaN	1403	3025	4429
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4431	17.577	NaN	1729.8	30	0	304.26	0.106			+	33726	RPGVEQPR	8	32	469.76192404862974	NaN	0	469.76202392578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RPGVEQPR_	REV__ENST00000358337.9_1_5:140050841-140051006:+|nuORF	51.33545320467046	1.7418937515398478	3				NaN	NaN	0	NaN	1404	3025	4429
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4432	17.579	NaN	1883	30	0	448.79	0.106	+			49385	VVTDIGVSSIG	11	52	523.7910766601562	NaN	0	523.7910766601562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVTDIGVSSIG_	RRH|p.A68V|1|0.32|ENSG00000180245|chr4:109833235-109833235|C/T|missense_variant	39.252832667884924	0.39048276625972167	3				NaN	NaN	0	NaN	1405	3025	4429
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4433	17.581	NaN	1548.3	30	0	238.15	0.106	+			40581	SVAELRSQK	9	39	509.2879638671875	NaN	0	509.2879638671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVAELRSQK_	ENSG00000131149|ENST00000253458|GSE1;nc|ENSG00000131149|Q14687-2|GSE1;nc|ENSG00000131149|Q14687-3|GSE1	68.62578634547417	0.11252986525588607	3				NaN	NaN	0	NaN	1406	3025	4429
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4434	17.583	NaN	3008.7	30	0	523.32	0.039	+			6463	AVYGQNDIHHK	11	45	641.3208979689331	NaN	0	641.3206176757812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVYGQNDIHHK_	ENSG00000138757|ENST00000359707|G3BP2;nc|ENSG00000138757|Q9UN86-2|G3BP2	29.244998729987998	0.43508344294624546	3				NaN	NaN	0	NaN	1407	3025	4429
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4443	17.602	NaN	3462.8	30	0	649.49	0.214				-1	MVLQKMAGT	9	45	332.1739350360115	993.4999757082346	3	332.173583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_MVLQKM(Oxidation (M))AGT_	ENST00000518319.5_1_8:94767110-94770759:+|nuORF	26.69291269510374	0.5537881896960711	3				NaN	NaN	0	NaN	1413	3028	4442
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4444	17.606	NaN	2038.9	30	0	812.63	0.036			+	30228	PSSPGPHPNPP	11	33	542.2634562776348	1082.5123596220694	2	542.2640991210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PSSPGPHPNPP_	REV__ENSG00000178718|ENST00000322177|RPP25	17.833141474888023	0.7869876583333034	3				NaN	NaN	0	NaN	1414	3028	4442
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4457	17.633	NaN	3133.1	30	0	405.35	0.142	+			46678	VGGSTRIPK	9	61	457.77483918810196	913.535125443004	2	457.7743835449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VGGSTRIPK_	ENSG00000044574|ENST00000324460|HSPA5;ENSG00000109971|ENST00000534624|HSPA8;ENSG00000126803|ENST00000247207|HSPA2;ENSG00000173110|ENST00000309758|HSPA6;ENSG00000204388|ENST00000375650|HSPA1B;ENSG00000204389|ENST00000375651|HSPA1A;ENSG00000204390|ENST00000375654|HSPA1L;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;HSPA5|p.N522Ifs*12|1|0.36|ENSG00000044574|chr9:125236992-125236992|T/-|frameshift_variant;HSPA6|p.D632Gfs*9|1|0.12|ENSG00000173110|chr1:161526547-161526548|-/G|frameshift_variant;HSPA8|p.K569Dfs*6|1|0.3|ENSG00000109971|chr11:123058302-123058303|TC/-|frameshift_variant;nc|ENSG00000109971|P11142-2|HSPA8;nc|ENSG00000204389|P0DMV8-2|HSPA1A	115.49404669440601	0.023927554121326553	3				NaN	NaN	0	NaN	1424	3031	4456
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4470	17.662	NaN	6366.9	30	0	3068.7	0.214			+	24828	LISVTTIIGL	10	56	515.3301002681565	1028.6456476031128	2	515.3306884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LISVTTIIGL_	REV__ENSG00000180902|ENST00000321264|D2HGDH;REV__ENST00000436747.5_1_2:242681986-242688401:+|nuORF;REV__nc|ENSG00000180902|Q8N465-2|D2HGDH;REV__nc|ENSG00000180902|Q8N465-3|D2HGDH	33.921630207806714	0.6028135429846169	3				NaN	NaN	0	NaN	1434	3034	4469
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4471	17.666	NaN	7472.6	30	0	971.99	0.106	+			22319	KTFEKELSGD	10	77	577.2888534601285	1152.563153987057	2	577.2889404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTFEKELSGD_	ENSG00000079313|ENST00000170168|REXO1	94.4091291819064	0.10583072883246657	3				NaN	NaN	0	NaN	1435	3034	4469
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4472	17.668	NaN	2748.6	30	0	1145.4	0.106			+	13484	GLLPPREGAP	10	46	336.19439706139946	1005.5613617843984	3	336.1936950683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GLLPPREGAP_	REV__ENSG00000078579|ENST00000180166|FGF20	26.79610172149135	0.6610034878437611	3				NaN	NaN	0	NaN	1436	3034	4469
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4473	17.67	NaN	5375.7	30	0	525.92	0.043			+	51006	YIWEDYRHSWR	11	46	805.878195116493	1609.7418372997859	2	806.3814086914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YIWEDYRHSWR_	REV__ENSG00000129292|ENST00000395386|PHF20L1;REV__ENST00000361997.9_1_8:133790074-133829825:+|nuORF;REV__ENST00000395383.5_1_8:133790074-133836319:+|nuORF;REV__nc|ENSG00000129292|A8MW92-2|PHF20L1;REV__nc|ENSG00000129292|A8MW92-4|PHF20L1;REV__PHF20L1-CHMP1A|1|fusion;REV__PHF20L1|p.E981Gfs*15|1|0.18|ENSG00000129292|chr8:132845806-132845807|-/G|frameshift_variant;REV__PHF20L1|p.K574Rfs*28|1|0.31|ENSG00000129292|chr8:132825341-132825341|A/-|frameshift_variant;REV__PHF20L1|p.N322Mfs*42|5|0.3|ENSG00000129292|chr8:132814664-132814664|A/-|frameshift_variant;REV__PHF20L1|p.V535*|4|0.38|ENSG00000129292|chr8:132824019-132824019|A/-|frameshift_variant	5.921104790170933	0.8427637746914891	3				NaN	NaN	0	NaN	1437	3034	4469
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4487	17.699	NaN	5084.1	30	0	855.35	0.214	+			2566	AQATVHVVK	9	60	476.7825911888456	951.5506294444912	2	476.7821044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AQATVHVVK_	ENST00000430374.5_1_2:217279626-217279842:+|nuORF	129.42129120953632	0.01549634589885217	3				NaN	NaN	0	NaN	1448	3037	4486
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4488	17.702	NaN	729.67	30	0	119.22	0.106			+	15798	GVVLYAIGL	9	32	452.7769775390625	NaN	0	452.7769775390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GVVLYAIGL_	REV__ENSG00000182107|ENST00000555868|TMEM30B;REV__ENST00000557163.1_1_14:61746812-61748042:-|nuORF	14.664097394203935	0.38735045005659413	3				NaN	NaN	0	NaN	1449	3037	4486
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4489	17.704	NaN	5228.6	30	0	660.5	0.041				-1	ICCCSYRNLCQ	11	66	710.2868876513267	NaN	0	710.287109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_IC(Carbamidomethyl (C))C(Carbamidomethyl (C))CSYRNLCQ_	ENST00000444362.2_1_1:1334931-1335667:+|nuORF;ENST00000448629.5_1_1:1334974-1335667:+|nuORF	23.52269567125451	0.456735970842152	3				NaN	NaN	0	NaN	1450	3037	4486
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4505	17.737	NaN	1714.4	30	0	400.18	0.214	+			24374	LFSEAVKM	8	24	462.74603271484375	NaN	0	462.74603271484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LFSEAVKM_	ART3|p.A238Lfs*10|1|0.23|ENSG00000156219|chr4:76082462-76082462|G/-|frameshift_variant;ENSG00000156219|ENST00000355810|ART3;ENST00000513494.5_1_4:76997042-77020397:+|nuORF;nc|ENSG00000156219|Q13508-2|ART3;nc|ENSG00000156219|Q13508-3|ART3	12.959181472943097	1.7418937515398478	3				NaN	NaN	0	NaN	1463	3040	4504
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4506	17.741	NaN	1548.8	30	0	521.05	0.106	+			26047	LSLLQQHR	8	38	332.19792453101843	NaN	0	332.1980285644531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSLLQQHR_	ENSG00000137877|ENST00000320955|SPTBN5;SPTBN5|p.A3297Gfs*48|1|0.56|ENSG00000137877|chr15:41853672-41853673|-/C|frameshift_variant;SPTBN5|p.G2751Afs*60|1|0.08|ENSG00000137877|chr15:41857685-41857685|C/-|frameshift_variant	19.359975847455235	1.7418937515398478	3				NaN	NaN	0	NaN	1464	3040	4504
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4507	17.743	NaN	1975.2	30	0	302.82	0.106	+			15546	GVFEGHTSK	9	45	481.24068109468266	NaN	0	481.24029541015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GVFEGHTSK_	ENSG00000103994|ENST00000564754|ZNF106;nc|ENSG00000103994|Q9H2Y7-2|ZNF106;nc|ENSG00000103994|Q9H2Y7|ZNF106	42.86426827375447	0.2558691296974908	3				NaN	NaN	0	NaN	1465	3040	4504
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4508	17.745	NaN	1688.3	30	0	376.54	0.034	+			2605	AQGPSSQLK	9	42	458.2487180336489	914.4828831340978	2	458.2488098144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AQGPSSQLK_	ENST00000349792.9_1_1:151171082-151171205:+|nuORF	39.252832667884924	0.4290233611298554	3				NaN	NaN	0	NaN	1466	3040	4504
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4519	17.768	NaN	2171.8	30	0	367.87	0.214	+			6045	AVMGNPKVK	9	43	472.2733402454902	942.5321275577804	2	472.2734069824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVMGNPKVK_	ENSG00000223609|ENST00000650601|HBD;ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF;HBD|p.A63V|1|0.34|ENSG00000223609|chr11:5234118-5234118|G/A|missense_variant	63.30626980617807	0.18605348971131092	3				NaN	NaN	0	NaN	1474	3043	4518
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4520	17.771	NaN	1704.3	30	0	440.16	0.036	+			25593	LQIGCNEIGD	10	32	531.2523193359375	NaN	0	531.2523193359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LQIGCNEIGD_	ENSG00000160505|ENST00000301295|NLRP4;nc|ENSG00000160505|Q96MN2-2|NLRP4;nc|ENSG00000160505|Q96MN2-3|NLRP4	18.262085536374414	0.4201028297492154	3				NaN	NaN	0	NaN	1475	3043	4518
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4532	17.797	NaN	6932.9	30	0	1631.5	0.214				-1	 	0	55	324.21722730824314	323.20995084164315	1	324.21685791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1484	3046	4531
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4533	17.801	NaN	3133.1	30	0	363.51	0.106	+			4112	ATDYGTIKK	9	55	498.77222378706426	995.5298946409285	2	498.7716064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATDYGTIKK_	ENSG00000112902|ENST00000382496|SEMA5A	143.37361013837676	0.008897369944672323	3				NaN	NaN	0	NaN	1485	3046	4531
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4534	17.803	NaN	3295	30	0	2188.5	0.106			+	25428	LPMSEILEH	9	29	534.7724471764614	1067.5303414197226	2	534.7730102539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LPMSEILEH_	REV__ENSG00000120705|ENST00000360541|ETF1;REV__nc|ENSG00000120705|P62495-2|ETF1	12.959181472943097	0.6112419832031292	3				NaN	NaN	0	NaN	1486	3046	4531
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4535	17.804	NaN	2682.8	30	0	640.3	0.036				-1	SEDAGACMHL	10	57	545.7160763026789	NaN	0	545.7161865234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_SEDAGAC(Carbamidomethyl (C))MHL_	ENSG00000079313|ENST00000170168|REXO1	29.14955571784316	0.4044631218331212	3				NaN	NaN	0	NaN	1487	3046	4531
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4553	17.841	NaN	29145	30	0	4721.7	0.214			+	38125	SPVVLQNDR	9	86	514.2802587667143	1026.5459646002284	2	514.2803344726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SPVVLQNDR_	REV__ENSG00000232810|ENST00000449264|TNF	107.00750918261382	0.032051501805654005	3				NaN	NaN	0	NaN	1502	3049	4552
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4554	17.845	NaN	901.43	30	0	87.874	0.032			+	13631	GMGPGVKK	8	35	387.22022622124445	772.4258995092889	2	387.2202453613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GMGPGVKK_	REV__ENST00000465814.5_1_11:72423956-72425365:-|nuORF	28.2542754592877	0.7411748056684583	3				NaN	NaN	0	NaN	1503	3049	4552
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4570	17.877	NaN	3310.8	30	0	397.09	0.214	+			40217	STSDSVRLK	9	60	496.77273298437524	991.5309130355505	2	496.7721252441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STSDSVRLK_	ENSG00000187735|ENST00000521604|TCEA1;ENST00000521086.6_1_8:54891227-54912595:-|nuORF;ENST00000522397.5_1_8:54883012-54934915:-|nuORF;nc|ENSG00000187735|P23193-2|TCEA1	98.62937762414208	0.04060045538121712	3				NaN	NaN	0	NaN	1516	3052	4569
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4571	17.881	NaN	2231.3	30	0	221.44	0.106	+			4826	ATNYITRNK	9	61	540.7936295061861	1079.5727060791721	2	540.7932739257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATNYITRNK_	ENSG00000100029|ENST00000354694|PES1;ENST00000466614.1_1_22:30983271-30987820:-|nuORF;nc|ENSG00000100029|O00541-2|PES1	70.8162118820467	0.13725933411854815	3				NaN	NaN	0	NaN	1517	3052	4569
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4572	17.883	NaN	5399.3	30	0	1570.8	0.106	+			40715	SVCGKGFSR	9	60	499.24810353826024	996.4816541433205	2	499.2474365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SVC(Carbamidomethyl (C))GKGFSR_	ENSG00000136451|ENST00000581208|VEZF1;ENST00000423931.1_1_3:192873384-192874521:-|nuORF	66.96192283764107	0.15557981141143568	3				NaN	NaN	0	NaN	1518	3052	4569
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4573	17.884	NaN	2244.7	30	0	293.97	0.037	+			20232	KELSDAVNVR	10	55	565.80923126443	NaN	0	565.8091430664062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KELSDAVNVR_	ENSG00000106052|ENST00000396319|TAX1BP1;nc|ENSG00000106052|Q86VP1-2|TAX1BP1;nc|ENSG00000106052|Q86VP1-3|TAX1BP1;nc|ENSG00000106052|Q86VP1-4|TAX1BP1	65.46538089061403	0.18964705739380194	3				NaN	NaN	0	NaN	1519	3052	4569
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4589	17.918	NaN	9388.8	30	0	1445.5	0.215	+			5857	AVIQGQAVRK	10	59	535.327919384176	1068.6412858351518	2	535.3279418945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVIQGQAVRK_	ENSG00000099812|ENST00000215582|MISP	155.5846463517096	0.00750394161302585	3				NaN	NaN	0	NaN	1532	3055	4588
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4590	17.921	NaN	13136	30	0	1349.5	0.106	+			5318	ATVLTTERK	9	73	509.7984090016089	1017.5822650700178	2	509.7983703613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATVLTTERK_	ENSG00000110107|ENST00000227524|PRPF19;PRPF19|p.S440Hfs*2|1|0.3|ENSG00000110107|chr11:60897945-60897945|A/-|frameshift_variant	146.78539889680295	0.007618400906539062	3				NaN	NaN	0	NaN	1533	3055	4588
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4591	17.923	NaN	3848.8	30	0	426.85	0.106	+			25603	LQLFSPVFC	9	54	527.2752624194999	1052.5359719057997	2	527.275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LQLFSPVFC_	ENST00000294256.12_2_11:64895574-64895820:-|nuORF	30.503639358989545	0.5181749237905803	3				NaN	NaN	0	NaN	1534	3055	4588
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4592	17.925	NaN	952.75	30	0	461.54	0.106				-1	SVCGKGFSR	9	27	333.16748046875	NaN	0	333.16748046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_SVC(Carbamidomethyl (C))GKGFSR_	ENSG00000136451|ENST00000581208|VEZF1;ENST00000423931.1_1_3:192873384-192874521:-|nuORF	24.519189625965996	0.35377483217337163	3				NaN	NaN	0	NaN	1535	3055	4588
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4593	17.927	NaN	1138.1	30	0	170.38	0.106			+	28473	NFVSGIVSLG	10	37	496.7720031738281	NaN	0	496.7720031738281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NFVSGIVSLG_	REV__ENSG00000134640|ENST00000257068|MTNR1B	19.1035232394073	0.4201028297492154	3				NaN	NaN	0	NaN	1536	3055	4588
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4594	17.929	NaN	2345.2	30	0	293.34	0.035	+			18991	IVTKTIENK	9	58	523.3165602731765	1044.618567613153	2	523.31689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IVTKTIENK_	ENSG00000144028|ENST00000323853|SNRNP200;ENST00000497539.5_1_2:96940752-96950410:-|nuORF	49.44154591367651	0.3095138337212152	3				NaN	NaN	0	NaN	1537	3055	4588
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4595	17.929	NaN	2465.1	30	0	483.89	0.142	+			27387	MKLCVVKKK	9	56	575.3449096679688	NaN	0	575.3449096679688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))KLC(Carbamidomethyl (C))VVKKK_	ENST00000231524.13_1_5:64905191-64905227:-|nuORF	51.33545320467046	0.19748963086191895	3				NaN	NaN	0	NaN	1538	3055	4588
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4610	17.962	NaN	11015	30	0	3317	0.214	+			7036	CSQAWGAVVGA	11	48	524.7483167634582	1047.4820805937163	2	524.7484741210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CSQAWGAVVGA_	ENST00000279394.7_1_16:30003318-30003555:+|nuORF	40.77816245573522	0.5472954108598816	3				NaN	NaN	0	NaN	1550	3058	4609
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4611	17.966	NaN	5081.6	30	0	1692.9	0.106			+	33663	RNGGGYAS	8	45	391.1825939765493	780.3506350198986	2	391.18280029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RNGGGYAS_	REV__ENSG00000075043|ENST00000359125|KCNQ2;REV__nc|ENSG00000075043|O43526-2|KCNQ2;REV__nc|ENSG00000075043|O43526-3|KCNQ2;REV__nc|ENSG00000075043|O43526-4|KCNQ2;REV__nc|ENSG00000075043|O43526-5|KCNQ2	25.450171626174864	0.7628259754767981	3				NaN	NaN	0	NaN	1551	3058	4609
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4612	17.968	NaN	832.85	30	0	217.82	0.034			+	-1	MEALVRTQ	8	29	482.248763027158	NaN	0	482.24871826171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))EALVRTQ_	REV__ENSG00000136883|ENST00000640217|KIF12;REV__nc|ENSG00000136883|Q96FN5|KIF12	32.81241826257853	1.7418937515398478	3				NaN	NaN	0	NaN	1552	3058	4609
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4624	17.993	NaN	4123.3	30	0	414.1	0.214	+			2674	AQNEPLTQK	9	65	514.7727532203669	1027.5309535075337	2	514.7723388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AQNEPLTQK_	ENSG00000156304|ENST00000286835|SCAF4;ENST00000467731.1_1_21:33057290-33073360:-|nuORF;nc|ENSG00000156304|O95104-2|SCAF4;nc|ENSG00000156304|O95104-3|SCAF4;SCAF4|p.E653Qfs*24|1|0.4|ENSG00000156304|chr21:31688393-31688394|-/TG|frameshift_variant;SCAF4|p.V1113Cfs*7|1|0.22|ENSG00000156304|chr21:31671506-31671506|C/-|frameshift_variant	85.86182877749512	0.07653218437724067	3				NaN	NaN	0	NaN	1561	3061	4623
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4625	17.997	NaN	2016.9	30	0	402.31	0.106	+			5808	AVIEHLKQK	9	49	533.3245849609375	NaN	0	533.3245849609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVIEHLKQK_	BPTF|p.D2844Afs*20|1|0.08|ENSG00000171634|chr17:67959766-67959767|-/C|frameshift_variant;BPTF|p.K2718Nfs*36|3|0.12|ENSG00000171634|chr17:67948150-67948150|A/-|frameshift_variant;ENSG00000171634|ENST00000306378|BPTF;nc|ENSG00000171634|Q12830-4|BPTF;nc|ENSG00000171634|Q12830|BPTF	53.08895987439943	0.18540527177656715	3				NaN	NaN	0	NaN	1562	3061	4623
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4626	17.999	NaN	1817.3	30	0	698.94	0.106			+	-1	PHHCSYCQ	8	23	565.71142578125	NaN	0	565.71142578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term),2 Carbamidomethyl (C)	_(Acetyl (Protein N-term))PHHC(Carbamidomethyl (C))SYC(Carbamidomethyl (C))Q_	REV__CSMD3|p.S380Lfs*12|1|0.04|ENSG00000164796|chr8:112976042-112976043|-/AGAAAGA|frameshift_variant	8.231297230196988	1.7418937515398478	3				NaN	NaN	0	NaN	1563	3061	4623
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4627	18.001	NaN	2203.6	30	0	713.46	0.106				-1	WLCDGDKDC	9	26	584.7217407226562	NaN	0	584.7217407226562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_WLC(Carbamidomethyl (C))DGDKDC(Carbamidomethyl (C))_	ENSG00000123384|ENST00000243077|LRP1;LRP1|p.R3469Gfs*24|2|0.38|ENSG00000123384|chr12:57201552-57201552|C/-|frameshift_variant	10.265252068803164	0.4022383999429647	3				NaN	NaN	0	NaN	1564	3061	4623
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4628	18.002	NaN	1812.3	30	0	282.73	0.036	+			13501	GLNECLHNNG	10	42	535.7379243567264	1069.4612957802526	2	535.7387084960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GLNECLHNNG_	ENSG00000157193|ENST00000306052|LRP8;nc|ENSG00000157193|Q14114-2|LRP8;nc|ENSG00000157193|Q14114-3|LRP8	36.446750945000026	0.5818864909973037	3				NaN	NaN	0	NaN	1565	3061	4623
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4643	18.034	NaN	5597.7	30	0	1142.1	0.214	+			49096	VVLENAAKK	9	64	486.2979232244449	970.5812935156898	2	486.2975769042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVLENAAKK_	ENSG00000171824|ENST00000376936|EXOSC10;ENST00000474216.5_1_1:11126777-11137033:-|nuORF;nc|ENSG00000171824|Q01780-2|EXOSC10	127.46168284122857	0.016682644177004526	3				NaN	NaN	0	NaN	1577	3064	4642
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4644	18.037	NaN	1152.7	30	0	424.55	0.106	+			43264	TFARNSVLV	9	33	336.19440937471745	1005.5613987243523	3	336.1938781738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TFARNSVLV_	ENSG00000182986|ENST00000682928|ZNF320	17.364965105453717	0.6112419832031293	3				NaN	NaN	0	NaN	1578	3064	4642
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4645	18.039	NaN	1410.5	30	0	521.32	0.106	+			10380	EVAPPEYHR	9	21	549.2722578497032	1096.5299627662064	2	549.271240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EVAPPEYHR_	ENSG00000185787|ENST00000426013|MORF4L1;nc|ENSG00000185787|Q9UBU8-3|MORF4L1;nc|ENSG00000185787|Q9UBU8|MORF4L1	16.473147378115264	0.6112419832031293	3				NaN	NaN	0	NaN	1579	3064	4642
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4646	18.041	NaN	2518.5	30	0	582.25	0.036	+			32553	QVTRLLLAHG	10	41	554.3362468584672	1106.6579407837344	2	554.3350830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QVTRLLLAHG_	ENSG00000148331|ENST00000277458|ASB6	34.172542307311794	0.6007644933930345	3				NaN	NaN	0	NaN	1580	3064	4642
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4660	18.071	NaN	3889.2	30	0	590.8	0.143			+	21112	KKRGFVQVS	9	59	524.8162049660623	1047.6178569989245	2	524.8169555664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KKRGFVQVS_	REV__ENSG00000105193|ENST00000251453|RPS16;REV__ENST00000469078.5_1_19:20235852-20236290:+|nuORF;REV__ENST00000601390.1_1_19:39926180-39926535:-|nuORF	63.53385203322761	0.18415635464017938	3				NaN	NaN	0	NaN	1591	3067	4659
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4672	18.098	NaN	4345.7	30	0	1143.3	0.214	+			40726	SVCGKSFSR	9	67	514.2527836477144	1026.4910143622287	2	514.25341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SVC(Carbamidomethyl (C))GKSFSR_	ENSG00000278129|ENST00000621650|ZNF8	58.2462437865262	0.22823408064396822	3				NaN	NaN	0	NaN	1600	3070	4671
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4673	18.101	NaN	1246.5	30	0	426.87	0.106				-1	TMGVGLMA	8	26	398.1898961345456	NaN	0	398.19000244140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_TMGVGLM(Oxidation (M))A_	ZC3H6|p.Q611Sfs*60|1|0.05|ENSG00000188177|chr2:112324638-112324638|T/-|frameshift_variant	20.481830146152948	1.741893751539848	3				NaN	NaN	0	NaN	1601	3070	4671
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4674	18.103	NaN	1319	30	0	276.24	0.036	+			6828	CHWLLWASG	9	27	536.7545776367188	NaN	0	536.7545776367188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_CHWLLWASG_	ENST00000446203.1_1_13:100060234-100060986:-|nuORF	12.959181472943097	0.3931207604263714	3				NaN	NaN	0	NaN	1602	3070	4671
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4685	18.129	NaN	5257.4	30	0	1492.3	0.214	+			5137	ATSTGGIVNK	10	52	474.26146578775666	946.5083786423133	2	474.2611389160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSTGGIVNK_	ENSG00000162174|ENST00000415229|ASRGL1;ENST00000534183.5_1_11:62105600-62156860:+|nuORF;nc|ENSG00000162174|Q7L266-2|ASRGL1	124.08010499294276	0.021567188538240013	3				NaN	NaN	0	NaN	1610	3073	4684
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4686	18.133	NaN	2688.1	30	0	613.68	0.106	+			12826	GENEEEAGLE	10	56	538.7233533282871	1075.432153723374	2	538.7229614257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GENEEEAGLE_	ENSG00000064933|ENST00000441310|PMS1;ENST00000421722.5_1_2:190656520-190720594:+|nuORF;nc|ENSG00000064933|P54277-2|PMS1;nc|ENSG00000064933|P54277-3|PMS1;nc|ENSG00000064933|P54277-4|PMS1	54.722347961057174	0.4138398245444204	3				NaN	NaN	0	NaN	1611	3073	4684
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4687	18.135	NaN	2685.2	30	0	303.98	0.106	+			5509	AVAEGAKNVVK	11	60	543.319850190035	1084.62514744687	2	543.3197021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVAEGAKNVVK_	ENSG00000160447|ENST00000291906|PKN3;PKN3|p.C465Afs*43|1|0.27|ENSG00000160447|chr9:128714271-128714271|C/-|frameshift_variant;PKN3|p.Y778Tfs*82|1|0.29|ENSG00000160447|chr9:128719968-128719968|C/-|frameshift_variant	68.62578634547417	0.24719609611953774	3				NaN	NaN	0	NaN	1612	3073	4684
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4688	18.136	NaN	2392.9	30	0	425.18	0.038	+			3329	ASMDNNSKFAK	11	43	606.7881469726562	NaN	0	606.7881469726562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASMDNNSKFAK_	ENSG00000150907|ENST00000379561|FOXO1	51.52775601994872	0.30434581687306933	3				NaN	NaN	0	NaN	1613	3073	4684
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4695	18.154	NaN	5018.7	30	0	536.8	0.214	+			49543	VYAQKHQQL	9	62	557.8042630072979	1113.5939730813957	2	557.8038940429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYAQKHQQL_	ENSG00000197323|ENST00000358465|TRIM33;nc|ENSG00000197323|Q9UPN9-2|TRIM33;TRIM33|p.L700Efs*5|1|0.07|ENSG00000197323|chr1:114410281-114410282|-/CAGAATTCTCC|frameshift_variant	143.8867514904718	0.008656634767784652	3				NaN	NaN	0	NaN	1617	3076	4694
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4696	18.158	NaN	3077.7	30	0	513.84	0.034	+			13780	GQGVNNVPK	9	55	456.74872452171377	911.4828961102276	2	456.7480163574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GQGVNNVPK_	ENSG00000179119|ENST00000336349|SPTY2D1;ENST00000536336.5_1_11:18633859-18655855:-|nuORF;nc|ENSG00000179119|Q68D10-2|SPTY2D1;nc|ENSG00000179119|Q68D10-3|SPTY2D1;SPTY2D1|p.P485Rfs*12|1|0.3|ENSG00000179119|chr11:18614820-18614820|G/-|frameshift_variant	87.75429964447693	0.0711966946989736	3				NaN	NaN	0	NaN	1618	3076	4694
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4707	18.183	NaN	3176.6	30	0	501.6	0.215	+			14782	GTLAQAVKK	9	52	458.28487354231805	914.5551941514361	2	458.28411865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTLAQAVKK_	ENSG00000112159|ENST00000369393|MDN1;MDN1|p.E2692*|2|0.32|ENSG00000112159|chr6:89706133-89706134|-/A|frameshift_variant;MDN1|p.F2691Lfs*7|2|0.37|ENSG00000112159|chr6:89706134-89706134|A/-|frameshift_variant;MDN1|p.K2642Nfs*17|2|0.29|ENSG00000112159|chr6:89707449-89707449|T/-|frameshift_variant;MDN1|p.L4077Cfs*15|1|0.16|ENSG00000112159|chr6:89680625-89680625|G/-|frameshift_variant;MDN1|p.L5278Ffs*6|1|0.18|ENSG00000112159|chr6:89652273-89652274|-/A|frameshift_variant	127.46168284122857	0.016682644177004526	3				NaN	NaN	0	NaN	1626	3079	4706
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4708	18.187	NaN	1316.4	30	0	378.28	0.036			+	-1	CPEMWTET	8	28	527.2041015625	NaN	0	527.2041015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_C(Carbamidomethyl (C))PEMWTET_	REV__CEP295NL|p.A31Rfs*35|1|0.56|ENSG00000178404|chr17:78892413-78892413|C/-|frameshift_variant	19.359975847455235	1.7418937515398478	3				NaN	NaN	0	NaN	1627	3079	4706
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4717	18.208	NaN	3647.7	30	0	1714.1	0.143			+	6225	AVRKRKPF	8	41	334.5501674280207	1000.6286728842622	3	334.550048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVRKRKPF_	REV__ENST00000586934.5_1_19:5623180-5651054:+|nuORF	19.359975847455235	0.7988239741663654	3				NaN	NaN	0	NaN	1633	3082	4716
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4730	18.237	NaN	1936.3	30	0	334.11	0.214	+			15436	GTYSIGKEK	9	40	491.76421937458446	981.5138858159689	2	491.763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTYSIGKEK_	DCLRE1A|p.V898Wfs*37|1|0.34|ENSG00000198924|chr10:113841535-113841535|T/-|frameshift_variant;ENSG00000198924|ENST00000361384|DCLRE1A	41.42661286455405	0.403525789677298	3				NaN	NaN	0	NaN	1643	3085	4729
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4731	18.241	NaN	1489.7	30	0	324.62	0.037	+			4043	ATDDYHYEK	9	36	571.244140625	NaN	0	571.244140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATDDYHYEK_	ENSG00000136819|ENST00000372447|C9orf78	37.81151784470057	0.28666463014928195	3				NaN	NaN	0	NaN	1644	3085	4729
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4742	18.264	NaN	1570.5	30	0	478.18	0.143	+			13091	GFVKVVKNK	9	42	509.8232421875	NaN	0	509.8232421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GFVKVVKNK_	ENSG00000122406|ENST00000370321|RPL5	55.50420428727701	0.16876052142120426	3				NaN	NaN	0	NaN	1652	3088	4741
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4751	18.288	NaN	2927.3	30	0	1832.6	0.214			+	2766	ARLAPGAGPL	10	35	461.7774631144177	921.5403732956354	2	461.77685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ARLAPGAGPL_	REV__ENST00000301327.4_1_8:145734706-145735743:+|nuORF;REV__ENST00000528047.5_1_8:145734706-145736158:+|nuORF	40.5726180659479	0.5438686920517214	3				NaN	NaN	0	NaN	1658	3091	4750
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4752	18.291	NaN	2205.7	30	0	413.5	0.106	+			15161	GTSGELSVKEK	11	54	567.8046143242062	1133.5946757152124	2	567.80419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTSGELSVKEK_	ENSG00000173517|ENST00000682557|PEAK1;PEAK1|p.F1319Lfs*11|1|0.37|ENSG00000173517|chr15:77133125-77133125|A/-|frameshift_variant;PEAK1|p.N1433Tfs*19|1|0.1|ENSG00000173517|chr15:77115099-77115099|T/-|frameshift_variant;PEAK1|p.Q863Kfs*186|1|0.48|ENSG00000173517|chr15:77179340-77179340|G/-|frameshift_variant	39.873155843976775	0.5596786644756743	3				NaN	NaN	0	NaN	1659	3091	4750
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4753	18.293	NaN	850.32	30	0	176.47	0.034			+	29879	PLHQSPVQ	8	27	453.2439880371094	NaN	0	453.2439880371094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PLHQSPVQ_	REV__ENST00000517417.2_1_5:140890741-140891002:+|nuORF	15.641811463095205	1.7418937515398478	3				NaN	NaN	0	NaN	1660	3091	4750
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4762	18.313	NaN	2234	30	0	433.42	0.145			+	27315	MGYEKALQQGQ	11	46	626.8037719726562	NaN	0	626.8037719726562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MGYEKALQQGQ_	REV__ENSG00000139998|ENST00000533601|RAB15;REV__ENST00000267512.9_1_14:65415074-65417765:-|nuORF;REV__ENST00000585059.5_1_14:65415074-65417335:-|nuORF	29.170058357718403	0.43541742044178583	3				NaN	NaN	0	NaN	1666	3094	4761
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4771	18.336	NaN	4244.3	30	0	618.86	0.143	+			4270	ATGGLEGKMK	10	64	496.2660313434251	990.5175097536502	2	496.2651062011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATGGLEGKMK_	AHNAK|p.I657Nfs*25|1|0.36|ENSG00000124942|chr11:62532447-62532448|-/T|frameshift_variant;AHNAK|p.K2311Rfs*11|1|0.33|ENSG00000124942|chr11:62527487-62527487|G/-|frameshift_variant;AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;AHNAK|p.L2124Ifs*37|1|0.04|ENSG00000124942|chr11:62528048-62528049|-/ATGCCTGATA|frameshift_variant;AHNAK|p.S1888Qfs*8|1|0.11|ENSG00000124942|chr11:62528755-62528756|-/G|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK	101.45984612302182	0.07336148045341315	3				NaN	NaN	0	NaN	1672	3097	4770
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4784	18.365	NaN	1007.5	30	0	129.48	0.142	+			14046	GSIAGASASPK	11	47	473.25443471963285	944.4943165060657	2	473.2528991699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSIAGASASPK_	ENSG00000096696|ENST00000379802|DSP;nc|ENSG00000096696|P15924-2|DSP;nc|ENSG00000096696|P15924-3|DSP	72.2432373244024	0.21703855426835802	3				NaN	NaN	0	NaN	1682	3100	4783
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4795	18.39	NaN	5531.6	30	0	462.05	0.144	+			40815	SVEEGEKVVK	10	63	552.3013917648032	1102.5882305964062	2	552.3015747070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVEEGEKVVK_	ENSG00000133835|ENST00000510025|HSD17B4;ENST00000511186.5_1_5:118788168-118811542:+|nuORF;ENST00000515235.6_1_5:118788237-118827866:+|nuORF;HSD17B4|p.L703Ifs*15|1|0.06|ENSG00000133835|chr5:119536530-119536531|-/GAAAAATA|frameshift_variant;nc|ENSG00000133835|P51659-2|HSD17B4;nc|ENSG00000133835|P51659-3|HSD17B4	112.10723106719422	0.0417416748461292	3				NaN	NaN	0	NaN	1690	3103	4794
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4806	18.417	NaN	2451.6	30	0	518.06	0.145	+			23354	KYTPPPHHI	9	42	545.2960154087255	NaN	0	545.296142578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KYTPPPHHI_	ENSG00000168653|ENST00000372969|NDUFS5	54.776311868738084	0.17377682019723872	3				NaN	NaN	0	NaN	1698	3106	4805
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4819	18.446	NaN	2309.7	30	0	373.04	0.214				-1	VVGMEPRM	8	42	467.72794600351676	933.4413390738335	2	467.7275085449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_VVGM(Oxidation (M))EPRM_	ENST00000415248.1_1_19:57946919-57954712:+|nuORF;ENST00000595162.5_1_19:57924974-57931056:+|nuORF;ENST00000599867.1_1_19:57922663-57931056:+|nuORF	30.503639358989545	0.7238069182250283	3				NaN	NaN	0	NaN	1708	3109	4818
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4820	18.45	NaN	3559.4	30	0	690.34	0.037			+	26589	LTVHLDGRRS	10	45	577.322998046875	NaN	0	577.322998046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LTVHLDGRRS_	REV__ENSG00000175426|ENST00000311106|PCSK1;REV__ENST00000513085.1_1_5:95728707-95748688:-|nuORF;REV__nc|ENSG00000175426|P29120-2|PCSK1;REV__PCSK1|p.Y729Ifs*21|2|0.31|ENSG00000175426|chr5:96393078-96393078|A/-|frameshift_variant	19.1035232394073	0.4201028297492154	3				NaN	NaN	0	NaN	1709	3109	4818
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4830	18.471	NaN	2941	30	0	407.11	0.214	+			15756	GVSQAMQQK	9	50	488.7483625938749	975.4821722545498	2	488.74774169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVSQAMQQK_	ENSG00000166398|ENST00000299505|GARRE1	87.69643885390035	0.07135982304947239	3				NaN	NaN	0	NaN	1716	3112	4829
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4831	18.475	NaN	2278.9	30	0	811.73	0.035	+			25118	LLQAHGGTLP	10	37	336.19403695189635	NaN	0	336.1943664550781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LLQAHGGTLP_	ENSG00000090889|ENST00000374403|KIF4A;ENSG00000226650|ENST00000435029|KIF4B;KIF4A|p.D669Rfs*13|1|0.06|ENSG00000090889|chrX:70376174-70376175|-/A|frameshift_variant;nc|ENSG00000090889|O95239-2|KIF4A	24.20275056022122	0.4201028297492154	3				NaN	NaN	0	NaN	1717	3112	4829
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4844	18.502	NaN	3754.3	30	0	843.08	0.145	+			39442	STEKIYIRK	9	53	569.3348370555163	1136.6551211778326	2	569.3341064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STEKIYIRK_	ENSG00000120798|ENST00000333003|NR2C1;ENSG00000177463|ENST00000425241|NR2C2;ENST00000475707.5_1_3:15045421-15079667:+|nuORF;nc|ENSG00000120798|P13056-2|NR2C1;nc|ENSG00000120798|P13056-3|NR2C1;nc|ENSG00000177463|P49116-2|NR2C2;NR2C2|p.F563Lfs*10|1|0.4|ENSG00000177463|chr3:15042899-15042899|T/-|frameshift_variant	54.722347961057174	0.257609425301511	3				NaN	NaN	0	NaN	1727	3115	4843
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4857	18.53	NaN	245210	30	0	67095	0.214				-1	ASMKKVKSL	9	112	336.53450333834246	1006.5816806152275	3	336.53424072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ASM(Oxidation (M))KKVKSL_	ENST00000369426.9_1_1:119575536-119588262:-|nuORF	52.936696900407355	0.27249468807391813	3				NaN	NaN	0	NaN	1737	3118	4856
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4858	18.534	NaN	19287	30	0	4148	0.106				-1	SRCSPPAAPY	10	61	553.2588541551146	1104.503155377029	2	553.2587280273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SRC(Carbamidomethyl (C))SPPAAPY_	ENSG00000116731|ENST00000311066|PRDM2;nc|ENSG00000116731|Q13029-3|PRDM2	29.170058357718403	0.6416167986984785	3				NaN	NaN	0	NaN	1738	3118	4856
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4859	18.536	NaN	18688	30	0	11960	0.106	+			38950	SSQRLAEIQ	9	57	516.2772332177387	1030.5399135022774	2	516.277099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSQRLAEIQ_	CCDC22|p.R448Q|1|0.08|ENSG00000101997|chrX:49248646-49248646|G/A|missense_variant	64.20726635412375	0.17854274437659667	3				NaN	NaN	0	NaN	1739	3118	4856
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4860	18.538	NaN	3801.4	30	0	752.72	0.106			+	-1	VKKDFKKQ	8	54	531.8185846762348	1061.6226164192694	2	531.8187866210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))VKKDFKKQ_	REV__ENSG00000136936|ENST00000375128|XPA;REV__XPA|p.K213Q|1|0.08|ENSG00000136936|chr9:97684959-97684959|T/G|missense_variant	42.396135135203025	0.6414440140393314	3				NaN	NaN	0	NaN	1740	3118	4856
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4861	18.539	NaN	11484	30	0	4676.9	0.106	+			36511	SFDKAKLK	8	65	468.7796594686582	935.5447660041165	2	468.7795715332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SFDKAKLK_	CON__P21752;ENSG00000034510|ENST00000233143|TMSB10	161.89823264540465	0.07234804555662853	3				NaN	NaN	0	NaN	1741	3118	4856
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4862	18.541	NaN	3287.2	30	0	462.49	0.106	+			15441	GTYTIHAQK	9	56	509.7694059332423	NaN	0	509.76904296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTYTIHAQK_	ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;nc|ENSG00000185164|Q5JPE7-3|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2;NOMO1|p.P1102Hfs*42|1|0.36|ENSG00000103512|chr16:14886838-14886838|C/-|frameshift_variant	77.31757898189308	0.08057531075035683	3				NaN	NaN	0	NaN	1742	3118	4856
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4863	18.543	NaN	5663.2	30	0	3183.5	0.036				-1	CTLSCVLCAS	10	29	557.2407655241561	1112.4669781151122	2	557.2392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))TLSCVLC(Carbamidomethyl (C))AS_	ENST00000466110.5_1_2:74595806-74598423:-|nuORF	16.473147378115264	0.7327422906225664	3				NaN	NaN	0	NaN	1743	3118	4856
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4874	18.565	NaN	7814.8	30	0	5193.2	0.214	+			46813	VIAKYMPTE	9	34	526.2800213994864	1050.5454898657727	2	526.2805786132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VIAKYMPTE_	ENSG00000129159|ENST00000265969|KCNC1	16.473147378115264	0.6112419832031293	3				NaN	NaN	0	NaN	1751	3121	4873
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4875	18.569	NaN	9328.6	30	0	4052.9	0.106	+			51458	YVGAAKLK	8	53	425.26357191133116	848.5125908894623	2	425.2630615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YVGAAKLK_	ENSG00000100938|ENST00000399440|GMPR2;ENSG00000137198|ENST00000259727|GMPR;ENST00000543191.5_1_6:16258277-16295414:+|nuORF;ENST00000544145.1_1_6:16289789-16295414:+|nuORF;nc|ENSG00000100938|Q9P2T1-2|GMPR2;nc|ENSG00000100938|Q9P2T1-3|GMPR2	79.9392285194092	0.32408006123154964	3				NaN	NaN	0	NaN	1752	3121	4873
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4876	18.571	NaN	8606.1	30	0	2398.3	0.106	+			6733	CAMFTGKNQK	10	35	564.2716440749347	1126.5287352166692	2	564.271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_CAMFTGKNQK_	ENST00000512977.1_1_5:137043266-137071515:-|nuORF	17.468008924990375	0.7276870902328821	3				NaN	NaN	0	NaN	1753	3121	4873
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4877	18.573	NaN	11134	30	0	2290.4	0.106			+	-1	GYYLYQMMM	9	39	624.2429007675103	1246.4712486018204	2	624.24365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	3 Oxidation (M)	_GYYLYQM(Oxidation (M))M(Oxidation (M))M(Oxidation (M))_	REV__ENSG00000166016|ENST00000435224|ABTB2;REV__nc|ENSG00000166016|Q8N961-2|ABTB2	12.959181472943097	0.6112419832031292	3				NaN	NaN	0	NaN	1754	3121	4873
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4878	18.574	NaN	4518.3	30	0	606.23	0.106	+			35107	SAGFPKAAKL	10	52	330.53123519641633	988.5718761894491	3	330.5310363769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SAGFPKAAKL_	ENSG00000132005|ENST00000254325|RFX1	20.94693142431847	0.7087701759873708	3				NaN	NaN	0	NaN	1755	3121	4873
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4879	18.576	NaN	3948.8	30	0	1018.2	0.106	+			42539	TARNIEEAK	9	40	344.5206049539469	1030.5399854620407	3	344.5203857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TARNIEEAK_	tr|U7SIM9|U7SIM9_FUSNUThiamine-phosphatesynthaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=thiEPE=3SV=1	24.519189625965996	0.574102787014149	3				NaN	NaN	0	NaN	1756	3121	4873
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4880	18.578	NaN	4306.4	30	0	1148.3	0.036			+	28402	NERIDREE	8	43	530.7537229733513	1059.4928930135025	2	530.7538452148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NERIDREE_	REV__ENSG00000081138|ENST00000397968|CDH7	29.14955571784316	0.7342621283720113	3				NaN	NaN	0	NaN	1757	3121	4873
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4885	18.592	NaN	8170.9	30	0	1048.7	0.211				-1	STWGDWECECA	11	37	672.23876953125	NaN	0	672.23876953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_STWGDWEC(Carbamidomethyl (C))ECA_	ENST00000373109.6_1_10:73822347-73822434:-|nuORF	9.182911543092327	0.456735970842152	3				NaN	NaN	0	NaN	1759	3124	4884
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4886	18.596	NaN	2775.5	30	0	883.62	0.106				-1	RCCVLERH	8	30	536.7601928710938	NaN	0	536.7601928710938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_RCC(Carbamidomethyl (C))VLERH_	ENST00000339094.5_1_15:85081807-85112930:-|nuORF	29.14955571784316	1.7418937515398478	3				NaN	NaN	0	NaN	1760	3124	4884
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4887	18.598	NaN	2428.8	30	0	486.49	0.106	+			50635	YECIQCGKAH	10	37	576.251220703125	NaN	0	576.251220703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YECIQCGKAH_	ENSG00000136866|ENST00000374227|ZFP37;nc|ENSG00000136866|Q9Y6Q3-2|ZFP37;nc|ENSG00000136866|Q9Y6Q3-3|ZFP37	14.137123925751023	0.4201028297492154	3				NaN	NaN	0	NaN	1761	3124	4884
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4888	18.599	NaN	6620.1	30	0	883.4	0.106				-1	 	0	43	704.1951904296875	NaN	0	704.1951904296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	1762	3124	4884
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4889	18.601	NaN	4535.2	30	0	911.17	0.106			+	-1	MTIMMMVMMT	10	28	634.2478637695312	NaN	0	634.2478637695312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	3 Oxidation (M)	_M(Oxidation (M))TIMMMVM(Oxidation (M))M(Oxidation (M))T_	REV__ENST00000339659.8_1_21:38850597-38853060:+|nuORF	10.265252068803164	0.42010282974921537	3				NaN	NaN	0	NaN	1763	3124	4884
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4890	18.603	NaN	1282.9	30	0	398.17	0.106			+	-1	RVWTPTCH	8	20	528.7566528320312	NaN	0	528.7566528320312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_RVWTPTC(Carbamidomethyl (C))H_	REV__AluSx_dup91179|chr16:18786126-18786367:+|16.05338004258843|0.0045621159872568|11.78|480.0|7|3|sense	20.481830146152948	1.741893751539848	3				NaN	NaN	0	NaN	1764	3124	4884
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4891	18.605	NaN	2853.9	30	0	499.26	0.037				-1	SPRPGCQAWC	10	33	581.2476196289062	NaN	0	581.2476196289062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_SPRPGCQAWC(Carbamidomethyl (C))_	ENST00000460283.1_2_6:43027707-43029170:+|nuORF;ENST00000472792.1_1_6:43027707-43029170:+|nuORF	15.641811463095205	0.4201028297492154	3				NaN	NaN	0	NaN	1765	3124	4884
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4903	18.63	NaN	4319.7	30	0	665.07	0.143	+			4997	ATSAFQTQK	9	57	491.2541012464386	980.4936495596772	2	491.2532043457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSAFQTQK_	ENSG00000139687|ENST00000267163|RB1;RB1|p.V654Cfs*4|1|0.33|ENSG00000139687|chr13:48456343-48456343|A/-|frameshift_variant	78.26377905018397	0.10505600812668463	3				NaN	NaN	0	NaN	1774	3127	4902
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4915	18.658	NaN	5919.7	30	0	624.49	0.143	+			4873	ATQAVFQKR	9	65	524.798369365181	1047.5821857971619	2	524.798583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATQAVFQKR_	ENSG00000100949|ENST00000216840|RABGGTA;ENST00000558534.5_1_14:24738716-24740321:-|nuORF;ENST00000560998.5_1_14:24737570-24740321:-|nuORF;RABGGTA|p.P160Lfs*5|1|0.17|ENSG00000100949|chr14:24269643-24269643|G/-|frameshift_variant;RABGGTA|p.Q194Sfs*43|1|0.31|ENSG00000100949|chr14:24269542-24269542|G/-|frameshift_variant	131.61620852596164	0.014413238321579053	3				NaN	NaN	0	NaN	1783	3130	4914
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4927	18.685	NaN	1151.8	30	0	140.21	0.141			+	19318	KAHHVNGL	8	48	438.245544033592	874.476535133984	2	438.2448425292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAHHVNGL_	REV__GPSM2|p.Y152H|1|0.26|ENSG00000121957|chr1:108897998-108897998|T/C|missense_variant	42.47446043378293	0.6409579893742323	3				NaN	NaN	0	NaN	1792	3133	4926
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4938	18.712	NaN	2844.2	30	0	391.4	0.143	+			3863	ATAMVTEQK	9	45	489.7502501352439	977.4859473372878	2	489.7498779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATAMVTEQK_	ENSG00000166398|ENST00000299505|GARRE1	80.45461616416974	0.09558281504443908	3				NaN	NaN	0	NaN	1800	3136	4937
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4949	18.738	NaN	3648.4	30	0	617.66	0.145			+	-1	QSMCPLLRAGL	11	61	623.3243735994247	1244.6341942656493	2	623.32470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_QSMC(Carbamidomethyl (C))PLLRAGL_	REV__ENST00000486209.5_1_22:21830876-21832684:-|nuORF	41.42661286455405	0.5384226294179143	3				NaN	NaN	0	NaN	1808	3139	4948
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4962	18.767	NaN	4159.7	30	0	664.81	0.214	+			34555	RVLEAIQKK	9	61	542.8457567292679	1083.6769605253357	2	542.8458251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVLEAIQKK_	ENSG00000169375|ENST00000394947|SIN3A;SIN3A|p.G659Afs*26|1|0.14|ENSG00000169375|chr15:75396375-75396375|C/-|frameshift_variant	84.81729255234993	0.07947707105691067	3				NaN	NaN	0	NaN	1818	3142	4961
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4963	18.771	NaN	3802.1	30	0	675.83	0.106	+			40777	SVDPKNYPK	9	61	524.2771746963738	1046.5397964595475	2	524.2774658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVDPKNYPK_	ENSG00000125538|ENST00000263341|IL1B;ENST00000491056.5_1_2:113587940-113590763:-|nuORF	68.78682469695295	0.14603441672067394	3				NaN	NaN	0	NaN	1819	3142	4961
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4964	18.773	NaN	1306.3	30	0	421.91	0.106			+	2739	ARAGPGSL	8	39	364.70641362150167	727.3982743098034	2	364.7061462402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ARAGPGSL_	REV__ENST00000598118.1_1_19:35506495-35517042:+|nuORF	40.5726180659479	0.6527593143185008	3				NaN	NaN	0	NaN	1820	3142	4961
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4965	18.775	NaN	3338.7	30	0	847.5	0.037	+			39679	STIGPEGVHQK	11	47	576.8044029025127	1151.5942528718253	2	576.8037719726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STIGPEGVHQK_	nc|ENSG00000157654|Q9Y2D5-8|PALM2AKAP2;nc|ENSG00000157654|Q9Y2D5-9|PALM2AKAP2	41.1089822145965	0.5427687864994973	3				NaN	NaN	0	NaN	1821	3142	4961
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4977	18.8	NaN	7458.2	30	0	4227.8	0.214	+			8083	DVSRMRRQ	8	36	349.85407118684776	1046.5403841607433	3	349.85382080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DVSRMRRQ_	ENSG00000135951|ENST00000393483|TSGA10	20.481830146152948	0.8005983782650069	3				NaN	NaN	0	NaN	1830	3145	4976
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4978	18.804	NaN	10393	30	0	4782.4	0.037	+			32506	QVQEGTKVLK	10	72	565.3330527280517	1128.6515525229033	2	565.8348388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QVQEGTKVLK_	CKAP2|p.K606Rfs*14|3|0.38|ENSG00000136108|chr13:52474899-52474899|A/-|frameshift_variant;CKAP2|p.R384Gfs*6|1|0.18|ENSG00000136108|chr13:52462405-52462405|A/-|frameshift_variant;CKAP2|p.T295Qfs*14|1|0.12|ENSG00000136108|chr13:52461702-52461702|A/-|frameshift_variant;CKAP2|p.T579Pfs*11|1|0.07|ENSG00000136108|chr13:52474011-52474011|A/-|frameshift_variant;ENSG00000136108|ENST00000258607|CKAP2;nc|ENSG00000136108|Q8WWK9-4|CKAP2;nc|ENSG00000136108|Q8WWK9-6|CKAP2;nc|ENSG00000136108|Q8WWK9|CKAP2	77.28774426308219	0.21777985819004636	3				NaN	NaN	0	NaN	1831	3145	4976
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4992	18.833	NaN	7764.5	30	0	1928.8	0.214	+			41015	SVGSVITKK	9	59	459.78493925003994	917.5553255668799	2	459.7843017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVGSVITKK_	ENSG00000076554|ENST00000518937|TPD52;ENST00000517445.5_1_8:80962678-80964851:-|nuORF;ENST00000521354.5_1_8:80950353-81083761:-|nuORF;ENST00000522364.5_1_8:80963727-80992703:-|nuORF;nc|ENSG00000076554|P55327-2|TPD52;nc|ENSG00000076554|P55327-3|TPD52;nc|ENSG00000076554|P55327-5|TPD52;nc|ENSG00000076554|P55327-6|TPD52;nc|ENSG00000076554|P55327-7|TPD52;nc|ENSG00000076554|P55327|TPD52	141.52041321563706	0.009766778904176347	3				NaN	NaN	0	NaN	1842	3148	4991
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	4993	18.837	NaN	989.38	30	0	137.99	0.035	+			13843	GQTNIHLSK	9	34	499.27498630920843	NaN	0	499.2742919921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GQTNIHLSK_	ENSG00000162909|ENST00000295006|CAPN2;ENST00000474026.5_1_1:223946905-223957668:+|nuORF;ENST00000487223.5_1_1:223946905-223962556:+|nuORF;nc|ENSG00000162909|P17655-2|CAPN2	32.75053402867276	0.3122164853807509	3				NaN	NaN	0	NaN	1843	3148	4991
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5008	18.868	NaN	40612	30	0	8576.2	0.214	+			39459	STEPPYSQK	9	78	518.7510634219212	1035.4875739106424	2	518.7510986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STEPPYSQK_	EEF1A1|p.P263Lfs*27|1|0.36|ENSG00000156508|chr6:73518595-73518595|G/-|frameshift_variant;ENSG00000156508|ENST00000309268|EEF1A1;ENST00000359165.5_1_12:19610040-19610154:-|nuORF;ENST00000401075.3_1_1:31961199-31961370:-|nuORF;ENST00000434005.1_1_7:22551057-22551540:-|nuORF;ENST00000443590.1_1_2:107314616-107314670:-|nuORF;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	129.42129120953632	0.01549634589885217	3				NaN	NaN	0	NaN	1855	3151	5007
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5009	18.871	NaN	3528.4	30	0	1914.2	0.106	+			41756	SVSLPVRKK	9	42	338.5540533137794	1012.6403305415381	3	338.5538024902344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVSLPVRKK_	ENSG00000102384|ENST00000682095|CENPI;nc|ENSG00000102384|Q92674-2|CENPI	12.206847966760668	0.6112419832031292	3				NaN	NaN	0	NaN	1856	3151	5007
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5010	18.873	NaN	1626.3	30	0	475.92	0.106	+			49228	VVNHFQKA	8	29	471.7627248169001	NaN	0	471.7624816894531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVNHFQKA_	TNFRSF19|p.R100H|1|0.32|ENSG00000127863|chr13:23615985-23615985|G/A|missense_variant	13.775330524044264	1.7418937515398478	3				NaN	NaN	0	NaN	1857	3151	5007
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5011	18.875	NaN	1422.4	30	0	307.72	0.034	+			48065	VSSPKLAPK	9	40	463.7876391133672	925.5607252935345	2	463.787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSSPKLAPK_	ENSG00000058673|ENST00000367210|ZC3H11A;ENSG00000215817|ENST00000651890|ZC3H11B;ENST00000495527.5_2_1:203819629-203821524:+|nuORF;nc|ENSG00000214558|P0DQW0|ZC3H11C	51.19269402634007	0.2889735674168909	3				NaN	NaN	0	NaN	1858	3151	5007
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5025	18.904	NaN	4123.2	30	0	753.01	0.214			+	13479	GLLHIEGVGL	10	57	336.53450333834246	1006.5816806152275	3	336.53399658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GLLHIEGVGL_	REV__ENST00000573965.1_3_16:2933286-2946490:+|nuORF	17.364965105453717	0.7282106878714807	3				NaN	NaN	0	NaN	1869	3154	5024
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5026	18.908	NaN	7271.5	30	0	593.43	0.106			+	-1	ILMCEEKASFQ	11	79	699.322685213073	1396.6308174929459	2	699.3242797851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))ILMC(Carbamidomethyl (C))EEKASFQ_	REV__THSD1|p.H326Q|1|0.19|ENSG00000136114|chr13:52397275-52397275|A/T|missense_variant	31.529811441608018	0.6590691889962369	3				NaN	NaN	0	NaN	1870	3154	5024
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5027	18.91	NaN	2054.6	30	0	500.48	0.106	+			22824	KVGDNLRR	8	59	479.28294241855724	NaN	0	479.2829284667969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KVGDNLRR_	tr|U7STW2|U7STW2_FUSNUPseudouridinesynthaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01213PE=3SV=1	55.50420428727701	1.7418937515398478	3				NaN	NaN	0	NaN	1871	3154	5024
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5028	18.912	NaN	1819.6	30	0	358.68	0.106	+			33957	RSCFNMIK	8	42	536.2559331900958	1070.4973134469915	2	536.2565307617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_RSC(Carbamidomethyl (C))FNM(Oxidation (M))IK_	ADGRG2|p.F122Lfs*21|2|0.28|ENSG00000173698|chrX:19028231-19028231|A/-|frameshift_variant	45.9519527083369	0.6193794311207887	3				NaN	NaN	0	NaN	1872	3154	5024
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5029	18.914	NaN	2016.6	30	0	525.71	0.106			+	17109	HSHQAQHTD	9	39	530.7311242513819	1059.4476955695636	2	530.7318115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HSHQAQHTD_	REV__ENST00000525598.1_1_11:118984241-118984860:+|nuORF	23.04248740728303	0.5879033540491928	3				NaN	NaN	0	NaN	1873	3154	5024
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5030	18.915	NaN	1286.3	30	0	220.27	0.034			+	50217	WNGDMKTL	8	45	482.7326533405305	963.450753747861	2	483.2342224121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_WNGDMKTL_	REV__ENSG00000162909|ENST00000295006|CAPN2;REV__ENST00000480581.1_1_1:223939741-223945196:+|nuORF;REV__nc|ENSG00000162909|P17655-2|CAPN2	64.20726635412375	0.4601301477144759	3				NaN	NaN	0	NaN	1874	3154	5024
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5042	18.941	NaN	2131.9	30	0	393.91	0.214	+			38847	SSNLPVNNK	9	48	486.7590431392153	971.5035333452306	2	486.7593688964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSNLPVNNK_	ENSG00000135974|ENST00000258457|C2orf49	52.936696900407355	0.27249468807391813	3				NaN	NaN	0	NaN	1883	3157	5041
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5043	18.944	NaN	1226.6	30	0	186.39	0.036			+	21088	KKNWFTVR	8	35	539.809814453125	NaN	0	539.809814453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KKNWFTVR_	REV__ENSG00000131951|ENST00000570145|LRRC9;REV__nc|ENSG00000131951|Q6ZRR7-2|LRRC9;REV__nc|ENSG00000131951|Q6ZRR7|LRRC9	19.996771675451527	1.7418937515398478	3				NaN	NaN	0	NaN	1884	3157	5041
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5055	18.969	NaN	1353.1	30	0	406.08	0.143			+	-1	ILMMMVWG	8	31	498.7386779785156	NaN	0	498.7386779785156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ILMMM(Oxidation (M))VWG_	REV__ENST00000287474.9_1_1:100195237-100203667:-|nuORF	16.704963439144045	1.7418937515398478	3				NaN	NaN	0	NaN	1893	3160	5054
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5068	18.999	NaN	2879.6	30	0	511.51	0.214	+			43142	TESNHDTAL	9	52	494.2231292976697	986.4317056621394	2	494.2222900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TESNHDTAL_	ANKRD17|p.L2249Yfs*84|1|0.34|ENSG00000132466|chr4:73090884-73090884|G/-|frameshift_variant;ENSG00000131503|ENST00000360839|ANKHD1;ENSG00000132466|ENST00000358602|ANKRD17;ENST00000506930.2_1_5:139884419-139889237:+|nuORF;ENST00000514252.1_1_4:73978989-74017230:-|nuORF;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1;nc|ENSG00000132466|O75179-2|ANKRD17;nc|ENSG00000132466|O75179-3|ANKRD17;nc|ENSG00000132466|O75179-6|ANKRD17;nc|ENSG00000132466|O75179-7|ANKRD17	45.97224482568171	0.3502073465782774	3				NaN	NaN	0	NaN	1903	3163	5067
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5069	19.002	NaN	4636.6	30	0	938.26	0.036			+	41751	SVSLGNLQQQ	10	61	537.2830765484912	1072.5516001637823	2	537.28369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVSLGNLQQQ_	REV__ENSG00000124374|ENST00000244221|PAIP2B	141.52041321563706	0.010348713679906373	3				NaN	NaN	0	NaN	1904	3163	5067
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5097	19.064	NaN	2836.4	30	0	590.77	0.144			+	-1	VTSVASPIKGM	11	49	553.3005241447124	1104.5864953562248	2	553.30029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_VTSVASPIKGM(Oxidation (M))_	REV__ENSG00000090020|ENST00000263980|SLC9A1;REV__ENST00000374089.5_1_1:27426800-27429818:-|nuORF	25.57405402267927	0.7215402271931856	3				NaN	NaN	0	NaN	1926	3169	5096
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5109	19.091	NaN	7628.6	30	0	2094.2	0.214			+	30811	QECSEQAQ	8	64	461.6824648138383	921.3503766944766	2	461.6827392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QECSEQAQ_	REV__ENSG00000180264|ENST00000696331|ADGRD2;REV__nc|ENSG00000180264|Q7Z7M1|ADGRD2	46.45678178249821	0.6162468623830999	3				NaN	NaN	0	NaN	1935	3172	5108
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5110	19.095	NaN	3139.9	30	0	417.82	0.037			+	26774	LVQLLAIPFH	10	53	575.8552856445312	NaN	0	575.8552856445312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LVQLLAIPFH_	REV__ENST00000526701.5_1_11:8721552-8724378:-|nuORF	29.170058357718403	0.40439580130713204	3				NaN	NaN	0	NaN	1936	3172	5108
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5124	19.124	NaN	4463.3	30	0	1543.9	0.214	+			39537	STFSGLAKHK	10	55	538.2989080662996	1074.5832631993992	2	538.2984619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STFSGLAKHK_	ENSG00000019549|ENST00000020945|SNAI2	120.27252224102466	0.026944837168485097	3				NaN	NaN	0	NaN	1947	3175	5123
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5125	19.127	NaN	1527.7	30	0	218.55	0.106			+	3461	ASRSTVLAK	9	45	466.7797186047163	931.5448842762327	2	466.77923583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASRSTVLAK_	REV__ENSG00000185504|ENST00000327787|FAAP100;REV__nc|ENSG00000185504|Q0VG06-3|FAAP100	44.377184641726394	0.36891676396732553	3				NaN	NaN	0	NaN	1948	3175	5123
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5126	19.129	NaN	1815.5	30	0	261.23	0.036			+	39115	SSTGCYLLPPA	11	40	554.7723999023438	NaN	0	554.7723999023438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSTGCYLLPPA_	REV__ENSG00000161996|ENST00000293879|WDR90;REV__ENST00000546516.5_1_16:705169-713132:+|nuORF;REV__ENST00000547407.5_1_16:711076-715728:+|nuORF;REV__ENST00000549024.5_1_16:711101-717586:+|nuORF;REV__ENST00000552683.5_1_16:707859-713132:+|nuORF;REV__ENST00000552728.5_1_16:708591-715679:+|nuORF	35.61828744233558	0.4066803947888518	3				NaN	NaN	0	NaN	1949	3175	5123
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5140	19.159	NaN	9548.3	30	0	2034.6	0.214	+			41354	SVMAQVRQK	9	80	523.7922931831085	1045.570033433017	2	523.7926635742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVMAQVRQK_	ENSG00000038358|ENST00000358933|EDC4;ENST00000572067.1_1_16:67917790-67918048:+|nuORF;nc|ENSG00000038358|Q6P2E9-2|EDC4	134.7655990226056	0.012935733000282069	3				NaN	NaN	0	NaN	1960	3178	5139
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5141	19.162	NaN	3648.7	30	0	1085.7	0.106	+			41958	SVVWFAKGL	9	43	336.19403695189635	NaN	0	336.1939697265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVVWFAKGL_	ENST00000218981.5_1_13:52365364-52378245:-|nuORF;nc|ENSG00000102796|A0PJE2|DHRS12	20.94693142431847	0.3660861156085067	3				NaN	NaN	0	NaN	1961	3178	5139
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5142	19.164	NaN	1209.6	30	0	153.14	0.106	+			918	AEIEHHEM	8	43	498.2156037207129	NaN	0	498.21563720703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEIEHHEM_	ENSG00000163939|ENST00000707071|PBRM1;nc|ENSG00000163939|Q86U86-2|PBRM1;nc|ENSG00000163939|Q86U86-3|PBRM1;nc|ENSG00000163939|Q86U86-4|PBRM1;nc|ENSG00000163939|Q86U86-5|PBRM1;nc|ENSG00000163939|Q86U86-6|PBRM1;nc|ENSG00000163939|Q86U86-7|PBRM1;nc|ENSG00000163939|Q86U86-8|PBRM1;nc|ENSG00000163939|Q86U86-9|PBRM1;nc|ENSG00000163939|Q86U86|PBRM1;PBRM1|p.H1521Pfs*95|1|0.12|ENSG00000163939|chr3:52554771-52554772|-/G|frameshift_variant;PBRM1|p.K991Nfs*23|1|0.28|ENSG00000163939|chr3:52587503-52587503|T/-|frameshift_variant;PBRM1|p.L1349Wfs*35|1|0.5|ENSG00000163939|chr3:52563324-52563324|G/-|frameshift_variant;PBRM1|p.N955Tfs*59|2|0.31|ENSG00000163939|chr3:52589171-52589171|T/-|frameshift_variant	76.84663266511073	1.7418937515398478	3				NaN	NaN	0	NaN	1962	3178	5139
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5143	19.166	NaN	1689.5	30	0	257.45	0.037			+	-1	EEMQLPNIR	9	38	573.2828403351784	NaN	0	573.2830200195312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_EEM(Oxidation (M))QLPNIR_	REV__ENSG00000196406|ENST00000370515|SPANXD;REV__ENSG00000198021|ENST00000370519|SPANXA1;REV__ENSG00000198573|ENST00000358993|SPANXC;REV__ENSG00000203926|ENST00000370518|SPANXA2	20.94693142431847	0.3660861156085067	3				NaN	NaN	0	NaN	1963	3178	5139
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5177	19.247	NaN	5365.1	30	0	665.32	0.214	+			35528	SAVGTIVKK	9	60	451.78737558165295	901.5601982301059	2	451.7869567871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAVGTIVKK_	ENSG00000161526|ENST00000584667|SAP30BP;ENST00000293208.13_1_17:73701692-73702598:+|nuORF;ENST00000578756.5_1_17:73699860-73702598:+|nuORF;ENST00000579005.1_1_17:73702284-73702598:+|nuORF;ENST00000580322.5_1_17:73702024-73702598:+|nuORF;ENST00000580601.5_1_17:73689468-73702598:+|nuORF;ENST00000583329.5_1_17:73699767-73702598:+|nuORF;ENST00000584557.1_1_17:73702349-73702598:+|nuORF;nc|ENSG00000161526|Q9UHR5-2|SAP30BP	115.49404669440601	0.023927554121326553	3				NaN	NaN	0	NaN	1988	3187	5176
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5178	19.251	NaN	3656.5	30	0	400.45	0.106	+			35385	SAQDFASRAK	10	64	540.7762662116537	1079.5379794901073	2	540.7757568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAQDFASRAK_	ENSG00000062716|ENST00000262291|VMP1;nc|ENSG00000062716|Q96GC9-2|VMP1;TAOK1-VMP1|1|fusion	68.62578634547417	0.2885473079336931	3				NaN	NaN	0	NaN	1989	3187	5176
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5179	19.253	NaN	5212.3	30	0	936.24	0.106	+			5507	AVAEGAKNVMK	11	70	559.30576031235	1116.5969676915	2	559.3056030273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVAEGAKNVMK_	ENSG00000065243|ENST00000370521|PKN2;nc|ENSG00000065243|Q16513-2|PKN2;nc|ENSG00000065243|Q16513-3|PKN2;nc|ENSG00000065243|Q16513-4|PKN2	101.45984612302182	0.05766908690822908	3				NaN	NaN	0	NaN	1990	3187	5176
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5180	19.255	NaN	6957.2	30	0	397.52	0.106				-1	CFWWDRWLCKN	11	91	835.8706814235529	1669.7268099139058	2	835.8717651367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))FWWDRWLC(Carbamidomethyl (C))KN_	ENST00000491103.5_1_6:10748006-10756744:+|nuORF	5.55782384252955	0.84446477687463	3				NaN	NaN	0	NaN	1991	3187	5176
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5181	19.256	NaN	1097.6	30	0	223.1	0.034			+	23664	LASGELLVR	9	38	479.2889424693968	NaN	0	479.2892150878906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LASGELLVR_	REV__sp|F5HIG1|HEPA_HCMVMDNAhelicase/primasecomplex-associatedproteinOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL102PE=3SV=1;REV__sp|P16827|HEPA_HCMVADNAhelicase/primasecomplex-associatedproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL102PE=2SV=2	40.77816245573522	0.2702456086868081	3				NaN	NaN	0	NaN	1992	3187	5176
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5193	19.282	NaN	2738.4	30	0	758.51	0.214	+			10294	ETPHLKLGL	9	50	336.53450333834246	1006.5816806152275	3	336.5340576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ETPHLKLGL_	ENSG00000188343|ENST00000518322|CIBAR1;ENST00000523577.5_1_8:94712794-94713716:+|nuORF;nc|ENSG00000188343|A1XBS5-2|CIBAR1;nc|ENSG00000188343|A1XBS5-3|CIBAR1;nc|ENSG00000188343|A1XBS5-4|CIBAR1;nc|ENSG00000188343|A1XBS5-5|CIBAR1	25.450171626174864	0.5654022654467333	3				NaN	NaN	0	NaN	2001	3190	5192
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5194	19.285	NaN	4184.7	30	0	1011.4	0.106	+			6442	AVYDRPGASPK	11	63	580.8067293983826	1159.598905863565	2	580.8067626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVYDRPGASPK_	ENSG00000030066|ENST00000378460|NUP160;nc|ENSG00000030066|Q12769|NUP160	104.42354056486148	0.051542069836817306	3				NaN	NaN	0	NaN	2002	3190	5192
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5195	19.287	NaN	1120.6	30	0	117.02	0.106	+			33246	RGAVGPPA	8	43	362.70949016897043	NaN	0	362.70892333984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RGAVGPPA_	ENST00000486996.5_1_20:30450513-30457513:-|nuORF	20.481830146152948	1.741893751539848	3				NaN	NaN	0	NaN	2003	3190	5192
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5196	19.289	NaN	3103.2	30	0	497.4	0.038	+			49137	VVMAADRSLKK	11	64	609.3548764346424	1216.6951999360847	2	609.3563842773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVMAADRSLKK_	ENSG00000189241|ENST00000368608|TSPYL1	41.38261913116395	0.539024598012394	3				NaN	NaN	0	NaN	2004	3190	5192
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5210	19.319	NaN	2124.5	30	0	236.71	0.214	+			36815	SIEKGGSLPK	10	57	508.292789299764	1014.5710256663281	2	508.29229736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIEKGGSLPK_	ENSG00000181163|ENST00000296930|NPM1;nc|ENSG00000181163|P06748-2|NPM1	54.722347961057174	0.4138398245444204	3				NaN	NaN	0	NaN	2015	3193	5209
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5211	19.322	NaN	2243.9	30	0	790.03	0.106			+	-1	HGMNPKSVP	9	25	491.74333616280313	981.4721193924063	2	491.7431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_HGM(Oxidation (M))NPKSVP_	REV__ENST00000243050.5_1_12:52445232-52448188:+|nuORF;REV__ENST00000394825.5_1_12:52445232-52448188:+|nuORF;REV__ENST00000548977.5_1_12:52435710-52448188:+|nuORF;REV__ENST00000549102.1_1_12:52437623-52448188:+|nuORF	17.364965105453717	0.6112419832031293	3				NaN	NaN	0	NaN	2016	3193	5209
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5212	19.324	NaN	2220.3	30	0	441.38	0.106				-1	RIIMAPFTD	9	34	540.2836497360685	NaN	0	540.28369140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_RIIM(Oxidation (M))APFTD_	ENSG00000136546|ENST00000643258|SCN7A;SCN7A|p.D959Lfs*11|1|0.11|ENSG00000136546|chr2:166423411-166423412|-/AA|frameshift_variant;SCN7A|p.Y1475Ifs*11|1|0.43|ENSG00000136546|chr2:166406206-166406206|A/-|frameshift_variant	17.364965105453717	0.37820932774828947	3				NaN	NaN	0	NaN	2017	3193	5209
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5213	19.326	NaN	1485.5	30	0	172.36	0.035	+			26824	LVSTPVRTK	9	40	500.81126854589763	999.6079841585953	2	500.8111572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LVSTPVRTK_	ENSG00000141027|ENST00000268712|NCOR1;ENST00000464381.5_1_17:15935612-15961439:-|nuORF;ENST00000470782.5_1_17:15935612-15971511:-|nuORF;ENST00000472189.1_1_17:15960700-15961247:-|nuORF;nc|ENSG00000141027|O75376-2|NCOR1	31.529811441608018	0.5085848003137583	3				NaN	NaN	0	NaN	2018	3193	5209
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5227	19.356	NaN	3643.5	30	0	2039.3	0.214	+			24761	LHYINPGIKE	10	47	395.22078768836406	1182.6405336652922	3	395.2203369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LHYINPGIKE_	ENST00000534336.1_1_11:65270469-65270529:+|nuORF	32.75053402867276	0.6123771875927935	3				NaN	NaN	0	NaN	2029	3196	5226
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5228	19.359	NaN	807.76	30	0	233.04	0.031			+	20577	KFTSLGYLR	9	33	362.2110135908138	NaN	0	362.2109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KFTSLGYLR_	REV__ENSG00000138190|ENST00000260762|EXOC6;REV__EXOC6|p.L640Ffs*39|1|0.37|ENSG00000138190|chr10:92974192-92974193|-/T|frameshift_variant;REV__nc|ENSG00000138190|Q8TAG9-2|EXOC6	18.262085536374414	0.37517301184500873	3				NaN	NaN	0	NaN	2030	3196	5226
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5242	19.388	NaN	4396.7	30	0	749.66	0.212	+			47932	VSMDNSNKYTK	11	57	643.8049174243328	1285.5952819154654	2	643.8052368164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSMDNSNKYTK_	ENSG00000118689|ENST00000406360|FOXO3;ENST00000395675.4_1_17:18575090-18575600:-|nuORF;nc|ENSG00000118689|O43524-2|FOXO3	47.227680397652996	0.4590463137409202	3				NaN	NaN	0	NaN	2041	3199	5241
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5243	19.392	NaN	2104	30	0	356.02	0.036	+			22964	KVQTEVLQK	9	56	536.8217091977398	NaN	0	536.8211669921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVQTEVLQK_	ENSG00000117395|ENST00000236051|EBNA1BP2;ENST00000463906.1_1_1:43630116-43636618:-|nuORF	42.86426827375447	0.2558691296974908	3				NaN	NaN	0	NaN	2042	3199	5241
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5256	19.419	NaN	3376.1	30	0	300.24	0.214	+			6089	AVNIVCHSK	9	62	485.7608955050279	969.5072380768559	2	485.7601318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVNIVCHSK_	ENSG00000159352|ENST00000368884|PSMD4;ENST00000461434.1_1_1:151227258-151234901:+|nuORF;ENST00000462970.5_1_1:151227258-151237442:+|nuORF;nc|ENSG00000159352|P55036-2|PSMD4	66.9202029811203	0.15592758990009112	3				NaN	NaN	0	NaN	2052	3202	5255
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5257	19.422	NaN	1972.5	30	0	320.66	0.035	+			26630	LVAMEQFY	8	41	500.74224504110254	NaN	0	500.7423095703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LVAMEQFY_	L1MD2_dup2312|chr3:169838249-169838855:-|1.025247598227015|0.1719973841498203|2.58|473.0|19|3|sense	35.200714571348534	1.7418937515398478	3				NaN	NaN	0	NaN	2053	3202	5255
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5270	19.45	NaN	10805	30	0	1454.2	0.215	+			42060	SYAKSTQRF	9	69	544.2808620085534	1086.5471710839067	2	544.281005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SYAKSTQRF_	ENST00000430580.6_1_1:16939836-16939869:-|nuORF	99.78786539795823	0.03941834715970116	3				NaN	NaN	0	NaN	2063	3205	5269
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5271	19.453	NaN	3007.1	30	0	946.69	0.106				-1	 	0	44	334.7644060696536	667.5142592061072	2	334.7640380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2064	3205	5269
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5272	19.455	NaN	5983.5	30	0	825.75	0.106			+	24756	LHTIESDRF	9	67	559.2863909725268	1116.5582290118534	2	559.2862548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LHTIESDRF_	REV__ENSG00000204344|ENST00000685781|STK19;REV__ENST00000466132.5_1_6:31939873-31948823:+|nuORF;REV__ENST00000469907.1_1_6:31940369-31948823:+|nuORF;REV__ENST00000491861.5_1_6:31940339-31948823:+|nuORF;REV__ENST00000492583.5_1_6:31939873-31948823:+|nuORF;REV__nc|ENSG00000204344|P49842-1|STK19;REV__nc|ENSG00000204344|P49842-2|STK19;REV__nc|ENSG00000204344|P49842-3|STK19	75.04331003522576	0.118981335847003	3				NaN	NaN	0	NaN	2065	3205	5269
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5273	19.457	NaN	930.59	30	0	155.16	0.106				-1	VAAMMSGI	8	36	398.1899852142924	NaN	0	398.1900939941406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_VAAM(Oxidation (M))MSGI_	ENSG00000125434|ENST00000577745|SLC25A35;nc|ENSG00000125434|Q3KQZ1-2|SLC25A35;nc|ENSG00000125434|Q3KQZ1-3|SLC25A35;nc|ENSG00000125434|Q3KQZ1-4|SLC25A35	28.2542754592877	1.7418937515398478	3				NaN	NaN	0	NaN	2066	3205	5269
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5274	19.459	NaN	1718.8	30	0	261.1	0.106			+	-1	KKCTANNR	8	52	496.2572973767243	NaN	0	496.2656555175781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_KKC(Carbamidomethyl (C))TANNR_	REV__ENSG00000188107|ENST00000503581|EYS;REV__EYS|p.C952Lfs*2|1|0.27|ENSG00000188107|chr6:64886834-64886835|-/A|frameshift_variant;REV__EYS|p.E1830Rfs*16|1|0.31|ENSG00000188107|chr6:64590379-64590380|-/T|frameshift_variant;REV__EYS|p.F2463Rfs*16|1|0.05|ENSG00000188107|chr6:63806214-63806215|-/AAGACCT|frameshift_variant;REV__EYS|p.G2248Wfs*10|1|0.08|ENSG00000188107|chr6:63999167-63999168|-/A|frameshift_variant;REV__EYS|p.N1413Tfs*15|1|0.21|ENSG00000188107|chr6:64591629-64591629|T/-|frameshift_variant;REV__EYS|p.N692Mfs*37|1|0.42|ENSG00000188107|chr6:65057676-65057676|T/-|frameshift_variant;REV__EYS|p.P1875Lfs*4|1|0.23|ENSG00000188107|chr6:64590243-64590243|G/-|frameshift_variant;REV__nc|ENSG00000188107|Q5T1H1-2|EYS;REV__nc|ENSG00000188107|Q5T1H1-4|EYS;REV__nc|ENSG00000188107|Q5T1H1|EYS	39.252832667884924	1.7418937515398478	3				NaN	NaN	0	NaN	2067	3205	5269
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5275	19.461	NaN	2428.9	30	0	343.1	0.106				-1	TSEGGKCRR	9	39	525.7586754185559	1049.5027979039116	2	525.7593994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_TSEGGKC(Carbamidomethyl (C))RR_	ENST00000220244.7_1_15:81241617-81241845:+|nuORF	29.14955571784316	0.5308295550522326	3				NaN	NaN	0	NaN	2068	3205	5269
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5276	19.463	NaN	2151.5	30	0	321.67	0.036			+	-1	KRMMPVVDI	9	50	552.7962150014829	NaN	0	552.7962646484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_KRM(Oxidation (M))MPVVDI_	REV__ENSG00000277399|ENST00000616987|GPR179;REV__nc|ENSG00000277399|Q6PRD1|GPR179	38.80614096846853	0.28164298475537564	3				NaN	NaN	0	NaN	2069	3205	5269
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5287	19.488	NaN	33172	30	0	5889.1	0.214	+			5864	AVIQVGKEK	9	83	486.29810779852403	970.5816626638481	2	486.2977294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVIQVGKEK_	ENSG00000156675|ENST00000330843|RAB11FIP1;nc|ENSG00000156675|Q6WKZ4-3|RAB11FIP1;nc|ENSG00000156675|Q6WKZ4-5|RAB11FIP1;RAB11FIP1|p.E639Rfs*27|1|0.12|ENSG00000156675|chr8:37872887-37872888|-/T|frameshift_variant;RAB11FIP1|p.Q714Tfs*22|1|0.3|ENSG00000156675|chr8:37872662-37872663|-/T|frameshift_variant	159.27591364854348	0.004707062175358555	3				NaN	NaN	0	NaN	2077	3208	5286
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5288	19.492	NaN	10480	30	0	4484.2	0.106			+	13461	GLKIGKDQL	9	54	324.53450001653266	970.5816706497981	3	324.5342102050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GLKIGKDQL_	REV__tr|U7SH91|U7SH91_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02371PE=4SV=1	21.9598887501803	0.5980208138527809	3				NaN	NaN	0	NaN	2078	3208	5286
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5289	19.494	NaN	1773.8	30	0	407.99	0.106			+	12174	GALVGKEK	8	42	401.2452225333053	800.4758921334106	2	401.24493408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GALVGKEK_	REV__tr|U7T5K0|U7T5K0_FUSNUelongationfactorGOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00176PE=3SV=1	71.29570347882199	0.39610197767395533	3				NaN	NaN	0	NaN	2079	3208	5286
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5290	19.496	NaN	1909.1	30	0	364.82	0.034			+	-1	SGMIKQPQ	8	35	452.73187968740064	903.4492064416013	2	452.7310791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_SGM(Oxidation (M))IKQPQ_	REV__L1PA8_dup4283|chr8:127182799-127184390:+|1.237907765894274|0.1348659474275502|3.2|479.0|31|2|sense	23.04248740728303	0.7814162927298575	3				NaN	NaN	0	NaN	2080	3208	5286
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5303	19.523	NaN	3494.8	30	0	514.16	0.214	+			23802	LCNVPDLITI	10	52	550.8038729907117	1099.5931930482234	2	550.803466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LCNVPDLITI_	ENSG00000119285|ENST00000366582|HEATR1;HEATR1|p.H353Pfs*16|1|0.31|ENSG00000119285|chr1:236595572-236595573|-/G|frameshift_variant;HEATR1|p.L334F|1|0.37|ENSG00000119285|chr1:236595630-236595630|G/A|missense_variant;HEATR1|p.M758Dfs*47|1|0.08|ENSG00000119285|chr1:236583167-236583168|-/G|frameshift_variant	32.75053402867276	0.6123771875927935	3				NaN	NaN	0	NaN	2090	3211	5302
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5304	19.526	NaN	2745	30	0	587.9	0.106	+			3449	ASQQNATVLK	10	51	530.2937055373446	1058.5728581414892	2	530.294189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASQQNATVLK_	ENST00000427574.6_1_11:76156149-76164398:+|nuORF	54.722347961057174	0.4138398245444204	3				NaN	NaN	0	NaN	2091	3211	5302
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5305	19.528	NaN	5525	30	0	813.46	0.106	+			3682	ASYVASTKYQK	11	69	623.3269734903001	1244.6393940474002	2	623.3277587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASYVASTKYQK_	ENSG00000044115|ENST00000302763|CTNNA1;ENSG00000066032|ENST00000402739|CTNNA2;ENST00000522792.1_1_5:138268134-138269775:+|nuORF;nc|ENSG00000044115|P35221-2|CTNNA1;nc|ENSG00000044115|P35221-3|CTNNA1;nc|ENSG00000066032|P26232-2|CTNNA2;nc|ENSG00000066032|P26232-3|CTNNA2;nc|ENSG00000066032|P26232-4|CTNNA2;nc|ENSG00000066032|P26232-5|CTNNA2;nc|ENSG00000066032|P26232-6|CTNNA2	105.35861542232443	0.049608935457698546	3				NaN	NaN	0	NaN	2092	3211	5302
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5306	19.53	NaN	1347.6	30	0	379.77	0.106	+			19956	KEGFKKCR	8	44	498.2768859863281	NaN	0	498.2768859863281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEGFKKCR_	nc|ENSG00000154678|Q14123-3|PDE1C	18.324413293986947	1.7418937515398478	3				NaN	NaN	0	NaN	2093	3211	5302
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5307	19.532	NaN	2586	30	0	407.5	0.106	+			41474	SVNSHIYQR	9	56	552.2825317382812	NaN	0	552.2825317382812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVNSHIYQR_	ENSG00000177409|ENST00000318238|SAMD9L;SAMD9L|p.N1174Tfs*28|1|0.24|ENSG00000177409|chr7:93132451-93132451|T/-|frameshift_variant	58.22992032128504	0.15686832049467786	3				NaN	NaN	0	NaN	2094	3211	5302
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5308	19.534	NaN	2524.1	30	0	588.49	0.037	+			38856	SSNSMQTIQK	10	54	562.2745884130712	1122.5346238929424	2	562.2750244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSNSMQTIQK_	ENSG00000111057|ENST00000388835|KRT18;ENST00000446618.1_1_22:19245879-19246326:+|nuORF;ENST00000447938.1_1_21:21797263-21797497:-|nuORF;ENST00000506277.1_1_5:36886275-36886596:+|nuORF	79.48907831485694	0.19979514868675113	3				NaN	NaN	0	NaN	2095	3211	5302
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5319	19.559	NaN	4345	30	0	539.68	0.214	+			2536	AQAESLRYK	9	60	533.288327354602	1064.5621017760038	2	533.2889404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AQAESLRYK_	ENSG00000149273|ENST00000531188|RPS3;ENST00000433853.1_1_3:183867695-183868220:+|nuORF;ENST00000487417.1_1_12:62415587-62415818:-|nuORF;nc|ENSG00000149273|P23396-2|RPS3;RPS3|p.L110I|1|0.35|ENSG00000149273|chr11:75402424-75402424|C/A|missense_variant	106.88024417677582	0.032181361622142884	3				NaN	NaN	0	NaN	2103	3214	5318
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5320	19.563	NaN	2546.3	30	0	931.05	0.106	+			41959	SVVWFAKGL	9	42	336.1940255085936	NaN	0	336.1939697265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVVWFAKGL_	ENST00000218981.5_1_13:52365364-52378245:-|nuORF;nc|ENSG00000102796|A0PJE2|DHRS12	20.94693142431847	0.3660861156085067	3				NaN	NaN	0	NaN	2104	3214	5318
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5321	19.565	NaN	1326.9	30	0	274.49	0.034	+			38730	SSLIVILLV	9	40	478.8247985839844	NaN	0	478.8247985839844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSLIVILLV_	ENSG00000146555|ENST00000404826|SDK1;ENST00000466611.1_1_7:4266967-4305013:+|nuORF;ENST00000476701.5_1_7:4169443-4308379:+|nuORF;nc|ENSG00000146555|Q7Z5N4-2|SDK1;nc|ENSG00000146555|Q7Z5N4-3|SDK1	8.231297230196988	0.4072763090772754	3				NaN	NaN	0	NaN	2105	3214	5318
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5334	19.592	NaN	9421.7	30	0	1117.5	0.214	+			41762	SVSNMVHTAK	10	71	537.2741690568748	1072.5337851805496	2	537.2742919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSNMVHTAK_	ENSG00000115839|ENST00000264158|RAB3GAP1;nc|ENSG00000115839|Q15042-3|RAB3GAP1;nc|ENSG00000115839|Q15042-4|RAB3GAP1	172.2149298939913	0.002981255192724562	3				NaN	NaN	0	NaN	2115	3217	5333
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5335	19.596	NaN	2469.4	30	0	234.86	0.106	+			40621	SVAKTILKR	9	48	508.3347899903902	1014.6550270475805	2	508.3350830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVAKTILKR_	ENSG00000114978|ENST00000396049|MOB1A;ENSG00000173542|ENST00000309395|MOB1B;ENST00000497054.5_1_2:74386211-74405801:-|nuORF;nc|ENSG00000173542|Q7L9L4-2|MOB1B	97.59673978297657	0.04344766104981724	3				NaN	NaN	0	NaN	2116	3217	5333
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5336	19.597	NaN	2395.4	30	0	484.5	0.106			+	-1	NSKMERKCS	9	37	570.267578125	NaN	0	570.267578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_NSKMERKC(Carbamidomethyl (C))S_	REV__ENST00000533300.1_1_8:70762477-70762648:+|nuORF	24.519189625965996	0.35377483217337163	3				NaN	NaN	0	NaN	2117	3217	5333
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5337	19.599	NaN	5484.1	30	0	778.63	0.041	+			31331	QIRKRVVRVFQ	11	48	714.9490966796875	NaN	0	714.9490966796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QIRKRVVRVFQ_	nc|ENSG00000181109|Q8NH57|OR52P1	14.137123925751023	0.456735970842152	3				NaN	NaN	0	NaN	2118	3217	5333
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5349	19.625	NaN	2674.6	30	0	795.91	0.143	+			29895	PLNGPINILG	10	49	336.53450333834246	1006.5816806152275	3	336.5340270996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PLNGPINILG_	ENSG00000178921|ENST00000314666|PFAS;PFAS|p.D615Mfs*45|1|0.41|ENSG00000178921|chr17:8264259-8264259|G/-|frameshift_variant	16.473147378115264	0.7327422906225664	3				NaN	NaN	0	NaN	2127	3220	5348
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5364	19.658	NaN	3561.6	30	0	906.27	0.213	+			14666	GTIEKSKLITK	11	66	609.3762772200054	1216.7380015068106	2	609.3759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTIEKSKLITK_	ENSG00000144426|ENST00000683969|NBEAL1;NBEAL1|p.A1274Qfs*17|1|0.1|ENSG00000144426|chr2:203135766-203135766|A/-|frameshift_variant;NBEAL1|p.F1670Lfs*25|1|0.21|ENSG00000144426|chr2:203144843-203144843|T/-|frameshift_variant;NBEAL1|p.F2315Lfs*2|1|0.17|ENSG00000144426|chr2:203193900-203193900|T/-|frameshift_variant;NBEAL1|p.K2562Rfs*15|1|0.41|ENSG00000144426|chr2:203209306-203209306|A/-|frameshift_variant;NBEAL1|p.N2072Kfs*10|1|0.35|ENSG00000144426|chr2:203172825-203172826|-/A|frameshift_variant;NBEAL1|p.T1311Nfs*3|1|0.08|ENSG00000144426|chr2:203135875-203135876|-/A|frameshift_variant;nc|ENSG00000144426|Q6ZS30-1|NBEAL1;nc|ENSG00000144426|Q6ZS30|NBEAL1	69.2159832094219	0.24227581199444026	3				NaN	NaN	0	NaN	2139	3223	5363
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5365	19.661	NaN	3271.6	30	0	771.16	0.037	+			40357	STTRLYLRK	9	37	569.340802747912	1136.667052562624	2	569.3405151367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STTRLYLRK_	ENSG00000051180|ENST00000267868|RAD51;nc|ENSG00000051180|Q06609-2|RAD51;nc|ENSG00000051180|Q06609-4|RAD51	16.006774744331256	0.6112419832031293	3				NaN	NaN	0	NaN	2140	3223	5363
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5386	19.71	NaN	1747.4	30	0	426.06	0.144			+	6794	CFRKHVQEG	9	32	552.2749427026558	NaN	0	552.275390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CFRKHVQEG_	REV__SI|p.R250C|1|0.41|ENSG00000090402|chr3:165065320-165065320|G/A|missense_variant	27.882242232435846	0.3367954786602879	3				NaN	NaN	0	NaN	2155	3229	5385
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5397	19.736	NaN	10405	30	0	1233.1	0.143	+			39142	SSVGSVITKK	10	72	503.30088845738834	1004.5872239815767	2	503.3004455566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSVGSVITKK_	ENSG00000076554|ENST00000518937|TPD52;ENST00000517445.5_1_8:80962678-80964851:-|nuORF;ENST00000521354.5_1_8:80950353-81083761:-|nuORF;ENST00000522364.5_1_8:80963727-80992703:-|nuORF;nc|ENSG00000076554|P55327-2|TPD52;nc|ENSG00000076554|P55327-3|TPD52;nc|ENSG00000076554|P55327-5|TPD52;nc|ENSG00000076554|P55327-6|TPD52;nc|ENSG00000076554|P55327-7|TPD52;nc|ENSG00000076554|P55327|TPD52	63.42647028704847	0.33467688528802414	3				NaN	NaN	0	NaN	2163	3232	5396
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5408	19.761	NaN	4184	30	0	713.78	0.214	+			35464	SASSLHLTK	9	57	472.2641025507576	942.5136521683153	2	472.26373291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SASSLHLTK_	ENSG00000181396|ENST00000313056|OGFOD3;nc|ENSG00000181396|Q6PK18-2|OGFOD3	93.5975768576971	0.05472259948179787	3				NaN	NaN	0	NaN	2171	3235	5407
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5409	19.765	NaN	1706.1	30	0	152.89	0.03				-1	 	0	59	321.7006383636938	641.3867237941877	2	321.7002868652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2172	3235	5407
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5418	19.784	NaN	3611.3	30	0	668.46	0.215	+			35392	SAQGNVYVK	9	58	483.2561932236949	964.4978335141898	2	483.2557067871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAQGNVYVK_	ENSG00000131051|ENST00000253363|RBM39;ENST00000397254.2_1_X:43889279-43890164:+|nuORF;ENST00000429968.5_1_20:34292405-34322136:-|nuORF;ENST00000492779.5_1_20:34292405-34320086:-|nuORF;ENST00000496183.5_1_20:34292405-34295154:-|nuORF;nc|ENSG00000131051|Q14498-2|RBM39;nc|ENSG00000131051|Q14498-3|RBM39;NDUFS1-RBM39|1|fusion;NDUFS1-RBM39|2|fusion;NDUFS1-RBM39|3|fusion;NDUFS1-RBM39|4|fusion	104.0567914643314	0.03506238181059741	3				NaN	NaN	0	NaN	2178	3238	5417
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5419	19.788	NaN	2516.2	30	0	326.32	0.106				-1	LMKCVSHVQ	9	54	551.7707936069019	NaN	0	551.7704467773438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))LM(Oxidation (M))KCVSHVQ_	ENST00000484389.6_1_13:61058882-61083684:+|nuORF	40.77816245573522	0.2702456086868081	3				NaN	NaN	0	NaN	2179	3238	5417
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5420	19.79	NaN	3924.4	30	0	647.34	0.038	+			4413	ATIDSQHGIEK	11	65	599.8069193030775	1197.599285672955	2	599.8068237304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATIDSQHGIEK_	ENSG00000110002|ENST00000456829|VWA5A;nc|ENSG00000110002|O00534-2|VWA5A;nc|ENSG00000110002|O00534-3|VWA5A;nc|ENSG00000110002|O00534-4|VWA5A;VWA5A|p.D273Ifs*24|1|0.19|ENSG00000110002|chr11:124123014-124123014|A/-|frameshift_variant;VWA5A|p.D571Mfs*3|1|0.56|ENSG00000110002|chr11:124137094-124137094|A/-|frameshift_variant;VWA5A|p.G366Afs*38|1|0.21|ENSG00000110002|chr11:124123733-124123733|G/-|frameshift_variant	109.38876744936951	0.041277168889090256	3				NaN	NaN	0	NaN	2180	3238	5417
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5431	19.813	NaN	4137.6	30	0	414.51	0.214	+			5683	AVEDAIARK	9	70	486.7769011540796	NaN	0	486.77685546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVEDAIARK_	ENSG00000158545|ENST00000301011|ZC3H18;ENST00000566317.1_1_16:88695075-88697704:+|nuORF	79.71258880314673	0.07236858429579222	3				NaN	NaN	0	NaN	2188	3241	5430
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5432	19.817	NaN	3759.7	30	0	545.21	0.106	+			13264	GISETRIEK	9	63	516.7878435029169	1031.5611340726336	2	516.7877197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GISETRIEK_	ENSG00000079819|ENST00000337057|EPB41L2;ENSG00000082397|ENST00000341928|EPB41L3;ENSG00000159023|ENST00000343067|EPB41;ENST00000368126.2_1_6:131179278-131186801:-|nuORF;ENST00000452150.6_1_6:131179278-131188835:-|nuORF;nc|ENSG00000079819|O43491-2|EPB41L2;nc|ENSG00000079819|O43491-3|EPB41L2;nc|ENSG00000079819|O43491-4|EPB41L2;nc|ENSG00000082397|Q9Y2J2-2|EPB41L3;nc|ENSG00000082397|Q9Y2J2-4|EPB41L3;nc|ENSG00000159023|P11171-2|EPB41;nc|ENSG00000159023|P11171-3|EPB41;nc|ENSG00000159023|P11171-4|EPB41;nc|ENSG00000159023|P11171-5|EPB41;nc|ENSG00000159023|P11171-6|EPB41	90.60085204095205	0.06317133949006545	3				NaN	NaN	0	NaN	2189	3241	5430
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5433	19.819	NaN	1269.7	30	0	180.43	0.034	+			12245	GASSFKLKN	9	40	476.26752231817426	NaN	0	476.2681884765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GASSFKLKN_	ENSG00000140464|ENST00000268058|PML;nc|ENSG00000140464|P29590-11|PML	39.252832667884924	0.27938773122138094	3				NaN	NaN	0	NaN	2190	3241	5430
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5447	19.848	NaN	1822.4	30	0	391.48	0.143	+			48476	VTLTTQHVK	9	44	513.8005060975136	NaN	0	513.8003540039062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTLTTQHVK_	ENSG00000127603|ENST00000564288|MACF1;ENST00000476350.1_1_1:39768622-39838291:+|nuORF;MACF1|p.A5223Lfs*8|1|0.21|ENSG00000127603|chr1:39388486-39388486|G/-|frameshift_variant;MACF1|p.N4824Kfs*19|1|0.33|ENSG00000127603|chr1:39387292-39387293|-/A|frameshift_variant;MACF1|p.S2157Ffs*3|1|0.37|ENSG00000127603|chr1:39333036-39333037|-/T|frameshift_variant;MACF1|p.T4896Lfs*29|1|0.27|ENSG00000127603|chr1:39387507-39387507|A/-|frameshift_variant;nc|ENSG00000127603|Q9UPN3-2|MACF1;nc|ENSG00000127603|Q9UPN3-3|MACF1;nc|ENSG00000127603|Q9UPN3-4|MACF1;nc|ENSG00000127603|Q9UPN3|MACF1	46.45678178249821	0.2311111838007999	3				NaN	NaN	0	NaN	2201	3244	5446
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5461	19.879	NaN	4758.8	30	0	559.05	0.214	+			3037	ASFENVRAK	9	66	511.2750239890802	1020.5354950449604	2	511.27471923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASFENVRAK_	ENSG00000136238|ENST00000348035|RAC1;ENSG00000169750|ENST00000306897|RAC3;ENST00000488373.5_1_7:6415539-6442074:+|nuORF;nc|ENSG00000136238|P63000-2|RAC1	93.5975768576971	0.05472259948179787	3				NaN	NaN	0	NaN	2212	3247	5460
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5462	19.882	NaN	2057.4	30	0	331.13	0.037			+	19570	KCSPGIHKKR	10	48	577.3330688476562	NaN	0	577.3330688476562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KCSPGIHKKR_	REV__ENSG00000164089|ENST00000296486|ETNPPL;REV__ETNPPL|p.E163Rfs*17|1|0.3|ENSG00000164089|chr4:108754634-108754635|-/T|frameshift_variant;REV__ETNPPL|p.E328Ifs*14|1|0.03|ENSG00000164089|chr4:108748105-108748106|-/AAAAT|frameshift_variant;REV__nc|ENSG00000164089|Q8TBG4-2|ETNPPL	29.550750289552195	0.40314579734438066	3				NaN	NaN	0	NaN	2213	3247	5460
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5477	19.913	NaN	25652	30	0	3750.9	0.214	+			39056	SSSPVNVKK	9	80	494.2777773783935	986.5410018235871	2	494.27691650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SSSPVNVKK_	ENSG00000153187|ENST00000640218|HNRNPU;ENST00000476241.2_2_1:245025757-245027609:-|nuORF;nc|ENSG00000153187|Q00839-2|HNRNPU	127.46168284122857	0.016682644177004526	3				NaN	NaN	0	NaN	2225	3250	5476
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5478	19.917	NaN	2890.8	30	0	405.7	0.106	+			5590	AVATKFVNK	9	58	489.29300164915554	976.5714503651111	2	489.2923889160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVATKFVNK_	ENSG00000038382|ENST00000344204|TRIO;ENST00000508717.1_1_5:14498631-14508016:+|nuORF;nc|ENSG00000038382|O75962-2|TRIO;nc|ENSG00000038382|O75962-3|TRIO;nc|ENSG00000038382|O75962-4|TRIO	93.1432384553994	0.056003526918089595	3				NaN	NaN	0	NaN	2226	3250	5476
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5479	19.919	NaN	4198.3	30	0	779.34	0.106	+			5249	ATVDIVQKK	9	68	501.30328215112536	1000.5920113690507	2	501.3023986816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATVDIVQKK_	AP4B1|p.C320Afs*21|1|0.35|ENSG00000134262|chr1:113900060-113900060|A/-|frameshift_variant;ENSG00000134262|ENST00000369569|AP4B1;ENST00000489499.5_1_1:114442984-114447339:-|nuORF;nc|ENSG00000134262|Q9Y6B7-2|AP4B1	95.81516180277367	0.04847050768394289	3				NaN	NaN	0	NaN	2227	3250	5476
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5480	19.921	NaN	3900.4	30	0	334.94	0.037	+			2622	AQIENSAAVQK	11	68	579.8103832719547	1157.6062136107093	2	579.8103637695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AQIENSAAVQK_	ENSG00000117226|ENST00000370481|GBP3;ENSG00000117228|ENST00000370473|GBP1;ENST00000394662.2_1_1:89887573-89889825:+|nuORF;GBP1|p.K391Sfs*28|1|0.19|ENSG00000117228|chr1:89056212-89056212|T/-|frameshift_variant;GBP3|p.G430Afs*34|1|0.37|ENSG00000117226|chr1:89010977-89010977|C/-|frameshift_variant;nc|ENSG00000117226|Q9H0R5-4|GBP3	141.91077491472637	0.00035695405801307794	3				NaN	NaN	0	NaN	2228	3250	5476
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5493	19.948	NaN	1778.4	30	0	625.26	0.214	+			2009	AKLEKILSK	9	41	515.3367633069972	1028.6589736807944	2	515.3364868164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AKLEKILSK_	CEP97|p.K618Nfs*15|1|0.41|ENSG00000182504|chr3:101762516-101762516|A/-|frameshift_variant;ENSG00000182504|ENST00000341893|CEP97;ENST00000489172.5_1_3:101443520-101477325:+|nuORF;nc|ENSG00000182504|Q8IW35-2|CEP97	24.231819034082204	0.5767884179199719	3				NaN	NaN	0	NaN	2238	3253	5492
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5494	19.952	NaN	1071.6	30	0	326.78	0.106			+	10884	FCGSCYDE	8	25	462.14679608802606	NaN	0	462.2123107910156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FCGSCYDE_	REV__ENSG00000169064|ENST00000675490|ZBBX;REV__nc|ENSG00000169064|A8MT70-3|ZBBX;REV__nc|ENSG00000169064|A8MT70|ZBBX	12.959181472943097	1.7418937515398478	3				NaN	NaN	0	NaN	2239	3253	5492
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5495	19.954	NaN	2737.6	30	0	481.68	0.038			+	47807	VSIYVAKNYGE	11	38	621.8230590820312	NaN	0	621.8230590820312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSIYVAKNYGE_	REV__ENSG00000102390|ENST00000373358|PBDC1	26.749707702089633	0.4462038980881566	3				NaN	NaN	0	NaN	2240	3253	5492
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5508	19.982	NaN	1889.4	30	0	261.62	0.144			+	43656	TITDQKNKE	9	46	538.78173828125	NaN	0	538.78173828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TITDQKNKE_	REV__BRCA2|p.K3416Nfs*11|1|0.15|ENSG00000139618|chr13:32398756-32398756|A/-|frameshift_variant;REV__ENSG00000139618|ENST00000380152|BRCA2	47.657333605630114	0.2228375344433429	3				NaN	NaN	0	NaN	2250	3256	5507
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5520	20.009	NaN	1597.4	30	0	169.65	0.214	+			35547	SAVRPVIEK	9	50	499.8036784712089	997.5928040092178	2	499.803466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAVRPVIEK_	ENSG00000116750|ENST00000367454|UCHL5;nc|ENSG00000116750|Q9Y5K5-2|UCHL5;nc|ENSG00000116750|Q9Y5K5-4|UCHL5;nc|ENSG00000116750|Q9Y5K5|UCHL5	74.1650062923329	0.12277912660386392	3				NaN	NaN	0	NaN	2259	3259	5519
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5521	20.012	NaN	1406.9	30	0	145.29	0.026				-1	 	0	41	198.18524169921875	NaN	0	198.18524169921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2260	3259	5519
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5531	20.036	NaN	4063.4	30	0	495.65	0.145			+	33625	RLTINYNEM	9	59	577.2854768402389	1152.5564007472776	2	577.2852172851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RLTINYNEM_	REV__CFH|p.A1180T|1|0.06|ENSG00000000971|chr1:196747155-196747155|G/A|missense_variant	49.536043120802724	0.308405419312776	3				NaN	NaN	0	NaN	2267	3262	5530
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5553	20.09	NaN	2747.6	30	0	454.81	0.214	+			23523	LAHSGSDL	8	52	400.2011860035985	798.387819073997	2	400.2009582519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LAHSGSDL_	ENSG00000198420|ENST00000479870|TCAF1;ENST00000392900.3_1_7:143551228-143582358:-|nuORF;ENST00000414990.2_3_7:143295168-143301929:+|nuORF;nc|ENSG00000198420|Q9Y4C2-2|TCAF1	76.84663266511073	0.3498490246073164	3				NaN	NaN	0	NaN	2283	3268	5552
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5554	20.093	NaN	1879.2	30	0	578.13	0.106			+	-1	MVLTMIILG	9	39	336.1940255085936	NaN	0	336.1938781738281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_M(Oxidation (M))VLTMIILG_	REV__ENSG00000182022|ENST00000435907|CHST15;REV__nc|ENSG00000182022|Q7LFX5-2|CHST15	21.9598887501803	0.3626577482100488	3				NaN	NaN	0	NaN	2284	3268	5552
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5555	20.095	NaN	1490.9	30	0	245.42	0.106	+			31356	QKAKAEEKK	9	48	530.3118501898001	1058.6091474464001	2	530.3126220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QKAKAEEKK_	CACNA1S|p.L1163Wfs*3|1|0.12|ENSG00000081248|chr1:201059227-201059227|G/-|frameshift_variant;CACNA1S|p.P1346Qfs*78|1|0.24|ENSG00000081248|chr1:201051060-201051060|G/-|frameshift_variant;ENSG00000081248|ENST00000362061|CACNA1S	60.11826168202944	0.21262886028301267	3				NaN	NaN	0	NaN	2285	3268	5552
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5556	20.097	NaN	4315.9	30	0	850.19	0.041	+			46107	VDFTQEEWEQL	11	50	712.3238525390625	NaN	0	712.3238525390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VDFTQEEWEQL_	ENSG00000184517|ENST00000570010|ZFP1	17.16674453292914	0.456735970842152	3				NaN	NaN	0	NaN	2286	3268	5552
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5570	20.127	NaN	4282.5	30	0	979.79	0.214	+			6020	AVMDVVKKQK	10	61	573.3395826115994	1144.6646122899988	2	573.338623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVMDVVKKQK_	ENSG00000092201|ENST00000216297|SUPT16H;SUPT16H|p.K393Sfs*29|2|0.2|ENSG00000092201|chr14:21364882-21364882|T/-|frameshift_variant;SUPT16H|p.S365Mfs*24|1|0.04|ENSG00000092201|chr14:21365096-21365097|-/A|frameshift_variant;SUPT16H|p.Y764Cfs*2|1|0.36|ENSG00000092201|chr14:21359493-21359494|AT/-|frameshift_variant	82.7504851949679	0.1731497355276012	3				NaN	NaN	0	NaN	2297	3271	5569
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5571	20.13	NaN	2505.5	30	0	337.29	0.035	+			2601	AQGNVYHLK	9	49	515.2776976282044	1028.5408423232086	2	515.2776489257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AQGNVYHLK_	ENSG00000143013|ENST00000370544|LMO4	117.81106730687013	0.02252488733980868	3				NaN	NaN	0	NaN	2298	3271	5569
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5585	20.159	NaN	4617.4	30	0	551.39	0.214	+			41719	SVSEVMKESK	10	68	562.2874491824872	1122.5603454317743	2	562.2877197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSEVMKESK_	ENSG00000132305|ENST00000410111|IMMT;ENST00000474969.5_1_2:86385703-86422514:-|nuORF;ENST00000486633.1_1_2:86400704-86422514:-|nuORF;nc|ENSG00000132305|Q16891-2|IMMT;nc|ENSG00000132305|Q16891-3|IMMT;nc|ENSG00000132305|Q16891-4|IMMT	143.37361013837676	0.009854612225601756	3				NaN	NaN	0	NaN	2309	3274	5584
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5586	20.163	NaN	3811.3	30	0	526.07	0.106	+			27738	MQNMSIHTK	9	64	545.263467083176	1088.512381233152	2	545.7655639648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MQNMSIHTK_	CON__H-INV:HIT000292931;CON__P05787;CON__REFSEQ:XP_092267;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	83.6470233535746	0.08277643980271215	3				NaN	NaN	0	NaN	2310	3274	5584
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5587	20.165	NaN	1153.4	30	0	306	0.034	+			13801	GQLSVHTPK	9	42	483.7719327841523	965.5293126351046	2	483.7745056152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GQLSVHTPK_	ENSG00000114861|ENST00000649528|FOXP1;nc|ENSG00000285708|Q9H334-3|FOXP1;nc|ENSG00000285708|Q9H334-4|FOXP1;nc|ENSG00000285708|Q9H334-6|FOXP1;nc|ENSG00000285708|Q9H334-7|FOXP1;nc|ENSG00000285708|Q9H334-8|FOXP1	34.08650109265054	0.48469117675810086	3				NaN	NaN	0	NaN	2311	3274	5584
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5610	20.219	NaN	1289.6	30	0	298.36	0.214	+			2057	ALAKDKFY	8	37	478.264044955919	NaN	0	478.26409912109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ALAKDKFY_	ENSG00000131018|ENST00000367255|SYNE1;ENST00000490135.6_1_6:152637953-152655276:-|nuORF;nc|ENSG00000131018|Q8NF91-4|SYNE1;nc|ENSG00000131018|Q8NF91-7|SYNE1;SYNE1|p.E4738Kfs*25|1|0.12|ENSG00000131018|chr6:152330474-152330474|T/-|frameshift_variant;SYNE1|p.E5862Gfs*83|1|0.12|ENSG00000131018|chr6:152300729-152300738|CCAGACTCCT/-|frameshift_variant;SYNE1|p.G6773Wfs*7|1|0.44|ENSG00000131018|chr6:152236186-152236187|-/A|frameshift_variant;SYNE1|p.K6871Rfs*22|2|0.52|ENSG00000131018|chr6:152233881-152233881|T/-|frameshift_variant;SYNE1|p.L8283Pfs*8|1|0.19|ENSG00000131018|chr6:152148173-152148174|-/G|frameshift_variant;SYNE1|p.M5602Nfs*13|2|0.32|ENSG00000131018|chr6:152310779-152310780|-/T|frameshift_variant;SYNE1|p.V8635Sfs*12|1|0.15|ENSG00000131018|chr6:152133375-152133375|T/-|frameshift_variant	53.351449002276354	1.7418937515398478	3				NaN	NaN	0	NaN	2328	3280	5609
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5611	20.222	NaN	1449.6	30	0	500.12	0.036	+			35272	SALSDLHAHK	10	43	539.7859827719517	1077.5574126107033	2	539.7861938476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SALSDLHAHK_	ENSG00000188536|ENST00000251595|HBA2;ENSG00000206172|ENST00000320868|HBA1;ENST00000487791.1_1_16:226802-227261:+|nuORF	33.921630207806714	0.6028135429846169	3				NaN	NaN	0	NaN	2329	3280	5609
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5622	20.248	NaN	1637.8	30	0	303.68	0.142	+			181	AALAKAIEK	9	52	457.7875433966407	913.5605338600814	2	457.7867736816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AALAKAIEK_	ENSG00000108946|ENST00000589228|PRKAR1A;nc|ENSG00000108946|P10644-2|PRKAR1A	77.31757898189308	0.1091473830098891	3				NaN	NaN	0	NaN	2337	3283	5621
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5643	20.298	NaN	8167.1	30	0	1707.3	0.214	+			45956	VASPRMDPK	9	69	500.76607908713515	999.5176052410703	2	500.7657775878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VASPRMDPK_	ENST00000492406.5_1_3:112280909-112281080:+|nuORF	87.75429964447693	0.0711966946989736	3				NaN	NaN	0	NaN	2352	3289	5642
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5644	20.302	NaN	2480.5	30	0	970	0.106			+	2419	APARPLRW	8	56	322.8587750042366	965.5544956129097	3	322.85858154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_APARPLRW_	REV__RHPN1|p.V681Sfs*93|1|0.37|ENSG00000158106|chr8:143382598-143382599|-/C|frameshift_variant	28.2542754592877	0.7411748056684583	3				NaN	NaN	0	NaN	2353	3289	5642
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5645	20.304	NaN	2472.8	30	0	489.33	0.106			+	20980	KKFGLHFIAL	10	52	587.3631296604754	NaN	0	587.3634033203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KKFGLHFIAL_	REV__GJA9|p.E229A|1|0.23|ENSG00000131233|chr1:38875413-38875413|T/G|missense_variant	35.15202426646627	0.38475398474706135	3				NaN	NaN	0	NaN	2354	3289	5642
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5646	20.305	NaN	3467.6	30	0	1240.2	0.035				-1	AVSIVCHSK	9	38	334.1797179445712	999.5173244339137	3	334.17950439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_AVSIVC(Carbamidomethyl (C))HSK_	PSMD4|p.N34S|1|0.35|ENSG00000159352|chr1:151262235-151262235|A/G|missense_variant	20.94693142431847	0.6074874384046576	3				NaN	NaN	0	NaN	2355	3289	5642
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5658	20.331	NaN	8035.6	30	0	743.06	0.145	+			6474	AVYLSTCKDSK	11	79	636.3177862388192	1270.6210195444382	2	636.3181762695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_AVYLSTC(Carbamidomethyl (C))KDSK_	ENSG00000231925|ENST00000434618|TAPBP;nc|ENSG00000231925|O15533-3|TAPBP;nc|ENSG00000231925|O15533-4|TAPBP	79.48907831485694	0.15663227531959176	3				NaN	NaN	0	NaN	2364	3292	5657
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5676	20.369	NaN	4139.9	30	0	474.58	0.214	+			14098	GSLGGQINK	9	51	437.243335568296	872.472118203392	2	437.2425537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSLGGQINK_	ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC;PRKDC|p.D2437Wfs*3|1|0.11|ENSG00000253729|chr8:47840161-47840162|-/CA|frameshift_variant;PRKDC|p.E1557Sfs*16|1|0.16|ENSG00000253729|chr8:47886051-47886051|C/-|frameshift_variant;PRKDC|p.G1227Vfs*50|2|0.31|ENSG00000253729|chr8:47893306-47893306|C/-|frameshift_variant;PRKDC|p.K3681Nfs*6|1|0.32|ENSG00000253729|chr8:47785174-47785177|TTCT/-|frameshift_variant;PRKDC|p.M3670*|1|0.5|ENSG00000253729|chr8:47785212-47785212|T/-|frameshift_variant;PRKDC|p.M3846Cfs*12|1|0.13|ENSG00000253729|chr8:47779047-47779047|T/-|frameshift_variant;PRKDC|p.M4020Cfs*2|1|0.31|ENSG00000253729|chr8:47776968-47776968|T/-|frameshift_variant;PRKDC|p.N3605Kfs*3|1|0.22|ENSG00000253729|chr8:47788993-47788994|-/T|frameshift_variant;PRKDC|p.N4037Ifs*15|1|0.17|ENSG00000253729|chr8:47776916-47776916|T/-|frameshift_variant;PRKDC|p.R2704Gfs*13|2|0.34|ENSG00000253729|chr8:47834238-47834238|T/-|frameshift_variant;PRKDC|p.S3402Ifs*16|1|0.04|ENSG00000253729|chr8:47799302-47799303|-/AAACCGTGAGTTAGAGGAGGTAA|frameshift_variant;PRKDC|p.S4099Qfs*6|1|0.25|ENSG00000253729|chr8:47774265-47774265|A/-|frameshift_variant;PRKDC|p.T3268Pfs*7|1|0.5|ENSG00000253729|chr8:47803426-47803426|T/-|frameshift_variant;PRKDC|p.W3401Cfs*4|1|0.01|ENSG00000253729|chr8:47799304-47799305|-/AATGAATA|frameshift_variant	127.46168284122857	0.016682644177004526	3				NaN	NaN	0	NaN	2379	3295	5675
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5677	20.372	NaN	2524.4	30	0	374.77	0.106	+			42795	TEALNHHNL	9	57	524.763340515749	NaN	0	524.76318359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEALNHHNL_	ENSG00000179344|ENST00000434651|HLA-DQB1;ENSG00000232629|ENST00000437316|HLA-DQB2;ENST00000487676.1_1_6:32629660-32630092:-|nuORF;nc|ENSG00000179344|P01920|HLA-DQB1;nc|ENSG00000232629|P05538-2|HLA-DQB2;nc|ENSG00000232629|P05538|HLA-DQB2	74.25504064058377	0.09106938647426577	3				NaN	NaN	0	NaN	2380	3295	5675
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5678	20.374	NaN	1222.5	30	0	205.28	0.106			+	-1	TLYGSVYMY	9	41	556.7517700195312	NaN	0	556.7517700195312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_TLYGSVYM(Oxidation (M))Y_	REV__ENST00000248594.10_1_7:77269294-77269360:+|nuORF	38.80614096846853	0.28164298475537564	3				NaN	NaN	0	NaN	2381	3295	5675
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5679	20.376	NaN	3345.7	30	0	464.74	0.039				-1	KLHHQHYCGGS	11	28	662.3013916015625	NaN	0	662.3013916015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_KLHHQHYC(Carbamidomethyl (C))GGS_	nc|ENSG00000102145|P15976-2|GATA1	9.705651100619752	0.456735970842152	3				NaN	NaN	0	NaN	2382	3295	5675
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5692	20.404	NaN	17318	30	0	1995.9	0.214				-1	 	0	70	441.26450980895055	880.5144666847011	2	441.2638244628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2392	3298	5691
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5693	20.407	NaN	2670.2	30	0	411.66	0.106	+			36632	SGGPLIVHK	9	58	454.27204714389933	906.5295413545987	2	454.27154541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SGGPLIVHK_	ENSG00000243649|ENST00000425368|CFB;ENST00000482312.1_1_6:31918808-31919804:+|nuORF	64.20726635412375	0.17854274437659667	3				NaN	NaN	0	NaN	2393	3298	5691
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5694	20.409	NaN	3138.9	30	0	860.47	0.106	+			15406	GTYGLDSVKKK	11	58	598.3384399414062	NaN	0	598.3384399414062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTYGLDSVKKK_	ENSG00000087338|ENST00000282570|GMCL1	50.79123845855914	0.3096357610420823	3				NaN	NaN	0	NaN	2394	3298	5691
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5695	20.411	NaN	2548.7	30	0	410.64	0.106	+			14324	GSYSKAFAR	9	51	493.7562008553985	NaN	0	493.75640869140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GSYSKAFAR_	ENSG00000005175|ENST00000005386|RPAP3;nc|ENSG00000005175|Q9H6T3-2|RPAP3;nc|ENSG00000005175|Q9H6T3-3|RPAP3	65.15724298150197	0.1273232316122292	3				NaN	NaN	0	NaN	2395	3298	5691
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5696	20.413	NaN	617.42	30	0	108.42	0.106			+	24898	LKLVEQSK	8	30	472.7926940917969	NaN	0	472.7926940917969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LKLVEQSK_	REV__ENSG00000146282|ENST00000369536|RARS2;REV__RARS2|p.K352Sfs*10|1|0.24|ENSG00000146282|chr6:87520237-87520237|T/-|frameshift_variant	18.324413293986947	1.7418937515398478	3				NaN	NaN	0	NaN	2396	3298	5691
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5697	20.415	NaN	3599.6	30	0	1355.4	0.037	+			44238	TRTHEVPSVV	10	43	562.8069469789054	1123.5993410246108	2	562.8084106445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TRTHEVPSVV_	DNAH5|p.A1669T|1|0.17|ENSG00000039139|chr5:13850761-13850761|C/T|missense_variant	37.81151784470057	0.569310847604193	3				NaN	NaN	0	NaN	2397	3298	5691
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5711	20.444	NaN	2362.2	30	0	838.46	0.214				-1	SLMFPILVA	9	47	336.1940681729636	NaN	0	336.19403076171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_SLM(Oxidation (M))FPILVA_	ENSG00000110917|ENST00000228506|MLEC;ENST00000535413.1_1_12:121134228-121138519:+|nuORF	21.9598887501803	0.3626577482100488	3				NaN	NaN	0	NaN	2408	3301	5710
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5712	20.448	NaN	1227.6	30	0	336.06	0.106				-1	 	0	25	478.2286826034881	954.4428122737762	2	478.22833251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2409	3301	5710
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5713	20.45	NaN	2033.3	30	0	267.73	0.037			+	-1	RQVGAQMPNM	10	44	582.2672729492188	NaN	0	582.2672729492188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Oxidation (M)	_RQVGAQM(Oxidation (M))PNM(Oxidation (M))_	REV__ENSG00000100393|ENST00000263253|EP300	20.94693142431847	0.4201028297492154	3				NaN	NaN	0	NaN	2410	3301	5710
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5724	20.473	NaN	5108.3	30	0	805.21	0.214	+			5188	ATTLKNRPL	9	61	507.30891071416306	1012.6032684951261	2	507.30853271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATTLKNRPL_	ENSG00000169129|ENST00000304129|AFAP1L2;ENST00000491814.1_1_10:116056685-116061337:-|nuORF;nc|ENSG00000169129|Q8N4X5-2|AFAP1L2;nc|ENSG00000169129|Q8N4X5-3|AFAP1L2;nc|ENSG00000169129|Q8N4X5-4|AFAP1L2	82.7504851949679	0.08565546331141553	3				NaN	NaN	0	NaN	2418	3304	5723
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5725	20.477	NaN	4542.5	30	0	2039.3	0.037	+			217	AALRPLVKPK	10	53	364.9132982631892	NaN	0	364.9132080078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AALRPLVKPK_	ENSG00000144713|ENST00000429711|RPL32;ENST00000452606.2_1_3:12880846-12881736:-|nuORF	54.722347961057174	0.27574710963839943	3				NaN	NaN	0	NaN	2419	3304	5723
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5748	20.529	NaN	1622.2	30	0	258.49	0.214				-1	KDMKPQVSC	9	44	546.7635254827181	1091.5124980322362	2	546.7631225585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_KDMKPQVSC(Carbamidomethyl (C))_	ENST00000539966.5_1_13:99104953-99105142:-|nuORF	18.262085536374414	0.6112419832031293	3				NaN	NaN	0	NaN	2436	3310	5747
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5749	20.533	NaN	3482.9	30	0	475.88	0.039			+	-1	ELKVIMADIKS	11	33	631.85498046875	NaN	0	631.85498046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_ELKVIM(Oxidation (M))ADIKS_	REV__PKD2|p.V863M|1|0.06|ENSG00000118762|chr4:88074876-88074876|G/A|missense_variant	11.635926663890343	0.456735970842152	3				NaN	NaN	0	NaN	2437	3310	5747
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5763	20.562	NaN	3216	30	0	747.88	0.142	+			46805	VIAESVVKK	9	59	486.80818963196066	971.6018263307213	2	486.8079833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VIAESVVKK_	ENSG00000112367|ENST00000230124|FIG4	104.0567914643314	0.03506238181059741	3				NaN	NaN	0	NaN	2448	3313	5762
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5777	20.592	NaN	2790.9	30	0	602.55	0.214	+			3815	ATAGPKRISL	10	52	338.5420554758178	1012.6043370276534	3	338.5418701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATAGPKRISL_	ENST00000369331.8_1_10:115439067-115480867:+|nuORF	32.75053402867276	0.6123771875927935	3				NaN	NaN	0	NaN	2459	3316	5776
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5778	20.596	NaN	6517.6	30	0	1141.7	0.106	+			5528	AVAIKAMAK	9	63	451.7784287776148	901.5423046220296	2	451.7785339355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVAIKAMAK_	EIF5A|p.A145P|1|0.15|ENSG00000132507|chr17:7311608-7311608|G/C|missense_variant;ENSG00000132507|ENST00000336458|EIF5A;ENSG00000253626|ENST00000520547|EIF5AL1;nc|ENSG00000132507|P63241-2|EIF5A	66.42927471994793	0.16001998865088202	3				NaN	NaN	0	NaN	2460	3316	5776
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5779	20.598	NaN	1204.6	30	0	203.95	0.106			+	44354	TSIEIKKK	8	38	473.80032625842864	945.5860995836573	2	473.8001403808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TSIEIKKK_	REV__ENSG00000133119|ENST00000380071|RFC3;REV__nc|ENSG00000133119|P40938-2|RFC3	23.04248740728303	0.7814162927298575	3				NaN	NaN	0	NaN	2461	3316	5776
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5780	20.6	NaN	3264.1	30	0	422.29	0.106			+	18511	ISIYEFAQK	9	62	549.7939840530537	1097.5734151729073	2	549.7940673828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ISIYEFAQK_	REV__ENSG00000021574|ENST00000315285|SPAST;REV__nc|ENSG00000021574|Q9UBP0-2|SPAST;REV__nc|ENSG00000021574|Q9UBP0-3|SPAST;REV__nc|ENSG00000021574|Q9UBP0-4|SPAST	58.22992032128504	0.22837015374068087	3				NaN	NaN	0	NaN	2462	3316	5776
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5781	20.602	NaN	4438.1	30	0	662.37	0.038	+			19517	KAVMRRWLPA	10	48	614.3615978687955	1226.7086428043908	2	614.362548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KAVMRRWLPA_	ENSG00000167658|ENST00000309311|EEF2;ENST00000598182.5_1_19:3980752-3982305:-|nuORF	23.52269567125451	0.6877354443478558	3				NaN	NaN	0	NaN	2463	3316	5776
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5796	20.633	NaN	2071.3	30	0	838.88	0.214	+			21281	KLQDSHKA	8	34	463.7565612792969	NaN	0	463.7565612792969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KLQDSHKA_	ENSG00000059728|ENST00000264444|MXD1;nc|ENSG00000059728|Q05195-2|MXD1	30.503639358989545	1.7418937515398478	3				NaN	NaN	0	NaN	2475	3319	5795
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5797	20.636	NaN	2760.1	30	0	409.81	0.106			+	-1	VKQNNARMK	9	51	552.8010861403853	1103.5876193475706	2	553.302490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_VKQNNARM(Oxidation (M))K_	REV__ENSG00000115306|ENST00000356805|SPTBN1;REV__nc|ENSG00000115306|Q01082-2|SPTBN1;REV__nc|ENSG00000115306|Q01082-3|SPTBN1;REV__SPTBN1|p.K503Rfs*24|1|0.06|ENSG00000115306|chr2:54626095-54626095|G/-|frameshift_variant	37.15910966729921	0.4535818937225704	3				NaN	NaN	0	NaN	2476	3319	5795
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5798	20.638	NaN	2774.6	30	0	512.68	0.037	+			26967	LYKKTQETL	9	39	562.3220825195312	NaN	0	562.3220825195312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LYKKTQETL_	ENSG00000101150|ENST00000346249|TPD52L2;nc|ENSG00000101150|O43399-5|TPD52L2;nc|ENSG00000101150|O43399-7|TPD52L2	33.921630207806714	0.3063038642147651	3				NaN	NaN	0	NaN	2477	3319	5795
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5809	20.664	NaN	16864	30	0	3761.3	0.214	+			43431	TGKWGKTVI	9	62	330.5309796309871	988.5711094931612	3	330.5307312011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TGKWGKTVI_	ENSG00000139219|ENST00000380518|COL2A1;nc|ENSG00000139219|P02458-1|COL2A1;nc|ENSG00000139219|P02458-3|COL2A1	23.04248740728303	0.5879033540491928	3				NaN	NaN	0	NaN	2485	3322	5808
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5810	20.667	NaN	2618	30	0	477.96	0.106	+			44895	TTYGALGIKVW	11	41	604.8349377453642	1207.6553225575283	2	604.8358764648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTYGALGIKVW_	tr|U7T295|U7T295_FUSNUSmallribosomalsubunitproteinuS3OS=FusobacteriumnucleatumCTI-5OX=1316586GN=rpsCPE=3SV=1	45.02220120713402	0.4892240028381124	3				NaN	NaN	0	NaN	2486	3322	5808
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5811	20.669	NaN	2749.9	30	0	379.77	0.037	+			50775	YEKRMATEV	9	55	563.782990704126	NaN	0	563.7816772460938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YEKRMATEV_	ENSG00000137154|ENST00000380394|RPS6;ENST00000497406.2_1_12:59414000-59414099:+|nuORF	42.86426827375447	0.2558691296974908	3				NaN	NaN	0	NaN	2487	3322	5808
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5824	20.697	NaN	6067.4	30	0	734.3	0.214	+			12278	GAYDGKFEK	9	67	507.74856807549065	1013.4825832177813	2	507.7480773925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GAYDGKFEK_	ENSG00000196363|ENST00000358625|WDR5;WDR5|p.V217Cfs*4|5|0.4|ENSG00000196363|chr9:134154476-134154476|C/-|frameshift_variant	104.42354056486148	0.0346881550498418	3				NaN	NaN	0	NaN	2497	3325	5823
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5825	20.701	NaN	1014.8	30	0	228.44	0.034	+			1549	AGFAALQLK	9	37	459.7734680175781	NaN	0	459.7734680175781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AGFAALQLK_	ENST00000396387.2_1_22:42503789-42504386:-|nuORF	31.954861631926434	0.3162336699109506	3				NaN	NaN	0	NaN	2498	3325	5823
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5839	20.729	NaN	2099.1	30	0	679.89	0.142	+			15259	GTTGAVLGQK	10	39	466.2642490330249	930.5139451328498	2	466.2640075683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTTGAVLGQK_	ENSG00000198643|ENST00000358781|FAM3D;FAM3D|p.G139Vfs*16|1|0.28|ENSG00000198643|chr3:58637183-58637183|C/-|frameshift_variant	65.46538089061403	0.31613324008013116	3				NaN	NaN	0	NaN	2509	3328	5838
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5852	20.758	NaN	53793	30	0	7895.5	0.214	+			14556	GTFGGLGSKSK	11	88	519.7825756192879	1037.5505983053756	2	519.7827758789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTFGGLGSKSK_	ENSG00000124942|ENST00000378024|AHNAK	156.16072019525166	6.025336435842151E-05	3				NaN	NaN	0	NaN	2519	3331	5851
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5853	20.762	NaN	2398	30	0	521.41	0.106	+			49368	VVSSVVKVK	9	52	472.8107763548318	943.6069997764636	2	472.8103332519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVSSVVKVK_	ENSG00000100722|ENST00000251038|ZC3H14;nc|ENSG00000100722|Q6PJT7-10|ZC3H14;nc|ENSG00000100722|Q6PJT7-11|ZC3H14;nc|ENSG00000100722|Q6PJT7-2|ZC3H14;nc|ENSG00000100722|Q6PJT7-3|ZC3H14;nc|ENSG00000100722|Q6PJT7-4|ZC3H14;nc|ENSG00000100722|Q6PJT7-5|ZC3H14;nc|ENSG00000100722|Q6PJT7-9|ZC3H14;ZC3H14|p.K307Nfs*48|1|0.26|ENSG00000100722|chr14:88574746-88574746|A/-|frameshift_variant	87.69643885390035	0.07135982304947239	3				NaN	NaN	0	NaN	2520	3331	5851
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5854	20.764	NaN	3226.2	30	0	1093	0.036				-1	 	0	39	544.3404481837965	543.3331717171965	1	545.7835693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2521	3331	5851
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5867	20.792	NaN	1574.5	30	0	633.27	0.145			+	30105	PRHPLGKVLA	10	36	363.2291583719951	NaN	0	363.2289733886719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PRHPLGKVLA_	REV__ENST00000309976.13_1_18:11897346-11908343:-|nuORF;REV__ENST00000588072.5_1_18:11906296-11908403:-|nuORF	33.921630207806714	0.38879399011744475	3				NaN	NaN	0	NaN	2531	3334	5866
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5880	20.821	NaN	2062.5	30	0	413.25	0.214	+			20397	KETEIVKKL	9	52	544.3404541015625	NaN	0	544.3404541015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KETEIVKKL_	ENSG00000115816|ENST00000234170|CEBPZ	72.2432373244024	0.09796301979040985	3				NaN	NaN	0	NaN	2541	3337	5879
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5881	20.824	NaN	2633.9	30	0	412.76	0.106			+	50236	WPGGPPLLVA	10	46	336.19402651861674	NaN	0	336.19415283203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WPGGPPLLVA_	REV__ENSG00000124587|ENST00000304611|PEX6;REV__nc|ENSG00000124587|Q13608-2|PEX6;REV__nc|ENSG00000124587|Q13608-3|PEX6	31.529811441608018	0.39664753963064203	3				NaN	NaN	0	NaN	2542	3337	5879
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5882	20.826	NaN	1928	30	0	149.28	0.026				-1	 	0	56	198.185302734375	NaN	0	198.185302734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2543	3337	5879
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5898	20.867	NaN	1358.1	30	0	239.17	0.214			+	19893	KEEVKSLK	8	45	480.78914038698497	NaN	0	480.78912353515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEEVKSLK_	REV__ENSG00000271321|ENST00000470691|CTAGE6	70.8162118820467	1.7418937515398478	3				NaN	NaN	0	NaN	2553	3343	5897
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5899	20.871	NaN	1371.8	30	0	247.65	0.037			+	30419	PWPRPPRPAS	10	31	580.82080078125	NaN	0	580.82080078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PWPRPPRPAS_	REV__NPAS3|p.L707Cfs*103|1|0.35|ENSG00000151322|chr14:33800420-33800420|G/-|frameshift_variant	16.473147378115264	0.4201028297492154	3				NaN	NaN	0	NaN	2554	3343	5897
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5910	20.896	NaN	6170.3	30	0	1187.7	0.214			+	-1	RVNLMERY	8	57	548.7832472274832	1095.5519415217664	2	548.7828979492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_RVNLM(Oxidation (M))ERY_	REV__ENST00000430298.6_1_19:12224253-12224301:+|nuORF	40.5726180659479	0.6527593143185008	3				NaN	NaN	0	NaN	2562	3346	5909
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5911	20.899	NaN	3626.2	30	0	606.14	0.106			+	-1	LLLLHLTTGC	10	48	570.8249970587345	1139.635441184269	2	570.8241577148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LLLLHLTTGC(Carbamidomethyl (C))_	REV__ENSG00000226979|ENST00000418386|LTA;REV__ENST00000471842.1_1_6:31540079-31540666:+|nuORF	37.15910966729921	0.575322462179216	3				NaN	NaN	0	NaN	2563	3346	5909
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5912	20.901	NaN	1868.6	30	0	253.94	0.106	+			48740	VTVEVVGKGK	10	56	508.3113251930132	1014.6080974528264	2	508.8124084472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTVEVVGKGK_	ENSG00000100697|ENST00000343455|DICER1;ENST00000527416.2_1_14:95555309-95557645:-|nuORF;nc|ENSG00000100697|Q9UPY3-3|DICER1	61.76455937419982	0.3497917639301274	3				NaN	NaN	0	NaN	2564	3346	5909
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5913	20.903	NaN	1759.6	30	0	311.76	0.034	+			21192	KLCLEVSR	8	42	474.26900022961144	946.5234475260229	2	474.2691650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KLCLEVSR_	ENSG00000183665|ENST00000328599|TRMT12;TRMT12|p.N369Kfs*12|1|0.36|ENSG00000183665|chr8:124452031-124452032|-/A|frameshift_variant;TRMT12|p.N373Mfs*53|1|0.47|ENSG00000183665|chr8:124452041-124452041|A/-|frameshift_variant	42.396135135203025	0.6414440140393314	3				NaN	NaN	0	NaN	2565	3346	5909
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5928	20.934	NaN	2147.1	30	0	675.91	0.214	+			21686	KQEKEIQTL	9	35	558.8171761591173	1115.6197993850344	2	558.8164672851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KQEKEIQTL_	ENSG00000176714|ENST00000324364|CCDC121;nc|ENSG00000176714|Q6ZUS5-2|CCDC121	30.317721548370564	0.5199124245378496	3				NaN	NaN	0	NaN	2577	3349	5927
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5929	20.937	NaN	2129.6	30	0	237.38	0.106	+			39489	STFIGRAAAK	10	52	511.2931196599314	1020.5716863866628	2	511.2929992675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STFIGRAAAK_	ENSG00000101361|ENST00000329276|NOP56;ENST00000466447.5_1_20:2636822-2638033:+|nuORF;ENST00000490753.1_1_20:2637050-2637903:+|nuORF;ENST00000492135.5_1_20:2636822-2638937:+|nuORF	77.31757898189308	0.2175361111083648	3				NaN	NaN	0	NaN	2578	3349	5927
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5930	20.939	NaN	3557.9	30	0	905.53	0.106	+			24788	LIGSTHILTPQ	11	45	590.3402613915113	1178.6659698498224	2	590.3400268554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LIGSTHILTPQ_	ENSG00000136854|ENST00000373299|STXBP1	21.68575002086885	0.7623253651248338	3				NaN	NaN	0	NaN	2579	3349	5927
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5931	20.941	NaN	3072	30	0	669.81	0.106	+			6450	AVYGGFKSK	9	49	478.76339128355994	955.5122296339199	2	478.76239013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVYGGFKSK_	ENSG00000196616|ENST00000305046|ADH1B;nc|ENSG00000196616|P00325-2|ADH1B	82.24051045832904	0.08786059719216216	3				NaN	NaN	0	NaN	2580	3349	5927
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5932	20.943	NaN	2102.5	30	0	372.04	0.037			+	24809	LINAPDQNKE	10	37	571.297119140625	NaN	0	571.297119140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LINAPDQNKE_	REV__ENSG00000120539|ENST00000375940|MASTL;REV__MASTL|p.I458Nfs*5|1|0.32|ENSG00000120539|chr10:27170324-27170325|-/A|frameshift_variant;REV__MASTL|p.K391Nfs*12|2|0.25|ENSG00000120539|chr10:27170127-27170127|A/-|frameshift_variant;REV__MASTL|p.N564Ifs*4|1|0.29|ENSG00000120539|chr10:27170646-27170646|A/-|frameshift_variant;REV__nc|ENSG00000120539|Q96GX5-2|MASTL;REV__nc|ENSG00000120539|Q96GX5-3|MASTL	26.69291269510374	0.4125295221340092	3				NaN	NaN	0	NaN	2581	3349	5927
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5945	20.971	NaN	6072.9	30	0	614.89	0.213	+			8342	EAKSTMICMNG	11	71	621.2691540872734	1240.5237552413466	2	621.2694091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_EAKSTMIC(Carbamidomethyl (C))MNG_	ENST00000369393.7_1_6:90513083-90513194:-|nuORF	91.26522074875469	0.0935951923676557	3				NaN	NaN	0	NaN	2591	3352	5944
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5946	20.974	NaN	1015.9	30	0	197.65	0.106	+			29635	PGGALNNL	8	42	378.2048645019531	NaN	0	378.2048645019531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PGGALNNL_	ENSG00000101190|ENST00000335351|TCFL5;nc|ENSG00000101190|Q9UL49-1|TCFL5	37.028477286268924	1.7418937515398478	3				NaN	NaN	0	NaN	2592	3352	5944
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5947	20.976	NaN	2325.1	30	0	486.11	0.038	+			20925	KKAAEDKCKQ	10	53	603.3193065549949	NaN	0	603.31982421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_KKAAEDKC(Carbamidomethyl (C))KQ_	nc|ENSG00000167460|P67936-2|TPM4	62.107414245175825	0.217068727747531	3				NaN	NaN	0	NaN	2593	3352	5944
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5962	21.008	NaN	1504	30	0	242.27	0.214	+			42648	TAVIDHHNY	9	42	535.2566378355896	NaN	0	535.2567749023438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAVIDHHNY_	ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656-2|DDOST;nc|ENSG00000244038|P39656-3|DDOST;nc|ENSG00000244038|P39656|DDOST	61.691277971877994	0.14210560126578747	3				NaN	NaN	0	NaN	2605	3355	5961
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5963	21.011	NaN	2484.8	30	0	640.31	0.036	+			22598	KTTGSAYTYS	10	34	539.7568205233995	1077.4990881135989	2	539.7569580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTTGSAYTYS_	ENSG00000013293|ENST00000231706|SLC7A14	24.519189625965996	0.6795976720565101	3				NaN	NaN	0	NaN	2606	3355	5961
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5975	21.037	NaN	5846.2	30	0	1225	0.214	+			5696	AVFASEVKK	9	61	489.78511363271514	977.5556743322303	2	489.7842712402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVFASEVKK_	ENSG00000105202|ENST00000221801|FBL;FBL|p.K318Rfs*2|1|0.09|ENSG00000105202|chr19:39834553-39834553|G/-|frameshift_variant	90.36981228632155	0.0638227155548745	3				NaN	NaN	0	NaN	2615	3358	5974
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5976	21.041	NaN	2798.1	30	0	817.17	0.106	+			24748	LHSLYQARI	9	56	367.54557398553436	1099.6148925568032	3	367.545166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LHSLYQARI_	ENSG00000188352|ENST00000338382|FOCAD	24.20275056022122	0.577060078256802	3				NaN	NaN	0	NaN	2616	3358	5974
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5977	21.043	NaN	999.46	30	0	282.92	0.036				-1	GCLKNYCEC	9	34	545.2105712890625	NaN	0	545.2105712890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_GC(Carbamidomethyl (C))LKNYCEC_	ENSG00000132749|ENST00000255087|TESMIN;ENSG00000189308|ENST00000340417|LIN54;nc|ENSG00000189308|Q6MZP7-2|LIN54;nc|ENSG00000189308|Q6MZP7-3|LIN54;nc|ENSG00000189308|Q6MZP7-4|LIN54	15.641811463095205	0.38404136392510424	3				NaN	NaN	0	NaN	2617	3358	5974
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	5990	21.07	NaN	605.55	30	0	104.65	0.142			+	49444	VVVMRKLV	8	33	472.3102858771257	NaN	0	472.3104248046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVVMRKLV_	REV__ENST00000452600.1_1_2:130987586-130988813:+|nuORF	21.70233525837049	1.7418937515398478	3				NaN	NaN	0	NaN	2627	3361	5989
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6016	21.129	NaN	10840	30	0	1734.7	0.214	+			40912	SVFQQGMKNK	10	81	583.8030012927734	1165.5914496523467	2	583.8035278320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVFQQGMKNK_	ENSG00000018625|ENST00000361216|ATP1A2;ENSG00000105409|ENST00000648268|ATP1A3;ENSG00000163399|ENST00000295598|ATP1A1;ENST00000479960.1_1_1:116943772-116944278:+|nuORF;nc|ENSG00000105409|P13637-2|ATP1A3;nc|ENSG00000105409|P13637-3|ATP1A3;nc|ENSG00000163399|P05023-3|ATP1A1;nc|ENSG00000163399|P05023-4|ATP1A1	133.7523857240709	0.012419833933541829	3				NaN	NaN	0	NaN	2647	3367	6015
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6017	21.133	NaN	2673.6	30	0	272.85	0.036	+			30263	PTDGVVRPPPG	11	59	546.2948112966914	1090.5750696601826	2	546.295166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PTDGVVRPPPG_	ENST00000532940.5_1_8:144921262-144922356:-|nuORF	49.44154591367651	0.42875387410569	3				NaN	NaN	0	NaN	2648	3367	6015
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6032	21.164	NaN	4317.1	30	0	704.43	0.214	+			48241	VTCSQVHFK	9	64	553.2769319108673	1104.5393108885346	2	553.2767944335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_VTC(Carbamidomethyl (C))SQVHFK_	ENSG00000174442|ENST00000307897|ZWILCH;nc|ENSG00000174442|Q9H900-2|ZWILCH	90.60085204095205	0.06317133949006545	3				NaN	NaN	0	NaN	2660	3370	6031
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6033	21.168	NaN	1461.1	30	0	166.4	0.106	+			34864	RYTCKARLA	9	44	541.2984008789062	NaN	0	541.2984008789062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RYTCKARLA_	ENSG00000112902|ENST00000382496|SEMA5A	37.50817390946774	0.28819615062043347	3				NaN	NaN	0	NaN	2661	3370	6031
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6034	21.17	NaN	1202.6	30	0	146.61	0.106	+			3144	ASHYIHIVK	9	37	534.3046264648438	NaN	0	534.3046264648438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASHYIHIVK_	ENSG00000159921|ENST00000642385|GNE;nc|ENSG00000159921|Q9Y223-2|GNE;nc|ENSG00000159921|Q9Y223-3|GNE;nc|ENSG00000159921|Q9Y223-4|GNE;nc|ENSG00000159921|Q9Y223-5|GNE	21.9598887501803	0.3626577482100488	3				NaN	NaN	0	NaN	2662	3370	6031
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6035	21.171	NaN	3335.8	30	0	419.24	0.039	+			19870	KEELYNLLQK	10	55	639.3595343870215	1276.704515840843	2	639.8619995117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEELYNLLQK_	tr|U7T3H1|U7T3H1_FUSNUMobA/MobLproteindomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00276PE=3SV=1	37.59989570853033	0.5712608395912122	3				NaN	NaN	0	NaN	2663	3370	6031
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6046	21.197	NaN	2637.3	30	0	402.6	0.145				-1	STICKYYQK	9	65	595.7969815204182	NaN	0	595.7974853515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_STIC(Carbamidomethyl (C))KYYQK_	ENSG00000075975|ENST00000170447|MKRN2	47.657333605630114	0.2228375344433429	3				NaN	NaN	0	NaN	2671	3373	6045
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6062	21.231	NaN	1409.6	30	0	167.49	0.214				-1	MQLGVHYSK	9	47	539.7717073930904	NaN	0	539.7716674804688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))QLGVHYSK_	ENST00000430246.6_1_14:21731784-21731862:-|nuORF;ENST00000554969.5_1_14:21731484-21731862:-|nuORF	54.722347961057174	0.17414871455573902	3				NaN	NaN	0	NaN	2684	3376	6061
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6063	21.235	NaN	3672	30	0	466.9	0.036	+			45262	TVQGKVFER	9	59	532.2987853352383	1062.5830177372766	2	532.29931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVQGKVFER_	ENSG00000090382|ENST00000261267|LYZ	84.81729255234993	0.07947707105691067	3				NaN	NaN	0	NaN	2685	3376	6061
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6075	21.261	NaN	2251	30	0	495.58	0.143			+	21866	KRLLSDSIA	9	46	501.801132533751	1001.587712134302	2	501.80059814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KRLLSDSIA_	REV__ENSG00000005100|ENST00000225296|DHX33;REV__nc|ENSG00000005100|Q9H6R0-2|DHX33	45.9519527083369	0.35044536499095585	3				NaN	NaN	0	NaN	2694	3379	6074
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6087	21.288	NaN	3411.8	30	0	630	0.214			+	-1	ALKEKTKL	8	54	486.8082296319445	971.6019063306891	2	486.80792236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))ALKEKTKL_	REV__ENSG00000063245|ENST00000270460|EPN1;REV__EPN1|p.A145V|1|0.43|ENSG00000063245|chr19:55685601-55685601|C/T|missense_variant;REV__EPN1|p.G278Afs*164|1|0.5|ENSG00000063245|chr19:55691818-55691818|G/-|frameshift_variant;REV__EPN1|p.P456Hfs*33|1|0.17|ENSG00000063245|chr19:55694823-55694823|C/-|frameshift_variant;REV__EPN1|p.T467Pfs*22|1|0.36|ENSG00000063245|chr19:55694854-55694854|C/-|frameshift_variant;REV__nc|ENSG00000063245|Q9Y6I3-1|EPN1;REV__nc|ENSG00000063245|Q9Y6I3-3|EPN1	66.42927471994793	0.4381325844043345	3				NaN	NaN	0	NaN	2703	3382	6086
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6088	21.291	NaN	3812.4	30	0	562.76	0.106	+			1344	AETRQPVVI	9	51	338.19785851182826	1011.5717461356849	3	338.19769287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AETRQPVVI_	ENSG00000126106|ENST00000372237|TMEM53	27.882242232435846	0.5426732730940306	3				NaN	NaN	0	NaN	2704	3382	6086
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6089	21.293	NaN	2777.1	30	0	324.74	0.034	+			5166	ATTAIAIHR	9	46	477.27991394877574	952.5452749643515	2	477.280029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATTAIAIHR_	ENST00000520964.1_1_X:134185341-134186186:-|nuORF;ENST00000522309.1_1_X:134185341-134186138:-|nuORF	98.62937762414208	0.04060045538121712	3				NaN	NaN	0	NaN	2705	3382	6086
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6102	21.321	NaN	2732	30	0	336.57	0.214	+			1103	AELHLSTER	9	59	352.5210538226639	1054.5413320681917	3	352.5207824707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AELHLSTER_	ENSG00000152240|ENST00000282058|HAUS1;nc|ENSG00000152240|Q96CS2-2|HAUS1	44.116797842482775	0.37197099687881774	3				NaN	NaN	0	NaN	2715	3385	6101
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6103	21.325	NaN	1540.5	30	0	215.99	0.106	+			3152	ASIDGCIKK	9	45	467.75540196659733	933.4962509999947	2	467.7547912597656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASIDGCIKK_	ENSG00000166750|ENST00000299977|SLFN5;nc|ENSG00000166750|Q08AF3-2|SLFN5;SLFN5|p.P698Lfs*21|1|0.46|ENSG00000166750|chr17:35265300-35265300|C/-|frameshift_variant;SLFN5|p.Q524Sfs*11|1|0.73|ENSG00000166750|chr17:35264609-35264609|C/-|frameshift_variant	62.107414245175825	0.1960472003779324	3				NaN	NaN	0	NaN	2716	3385	6101
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6104	21.326	NaN	1689.2	30	0	250.23	0.037			+	49587	VYGDPDTLIGN	11	35	582.2813110351562	NaN	0	582.2813110351562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYGDPDTLIGN_	REV__tr|U7T3Q2|U7T3Q2_FUSNUCopperamineoxidaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00213PE=4SV=1	23.52269567125451	0.456735970842152	3				NaN	NaN	0	NaN	2717	3385	6101
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6118	21.356	NaN	11791	30	0	1730.4	0.214	+			48409	VTIKEGSQLK	10	70	551.8272940649982	1101.6400351967964	2	551.8270263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTIKEGSQLK_	ENSG00000100138|ENST00000401959|SNU13	183.72194652814687	0.0008638117737139713	3				NaN	NaN	0	NaN	2728	3388	6117
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6119	21.36	NaN	1677.7	30	0	216.81	0.106	+			41837	SVSTKLISK	9	44	481.7974391622146	961.5803253912292	2	481.7969665527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVSTKLISK_	ENSG00000157741|ENST00000473989|UBN2;UBN2|p.G1191Efs*28|1|0.17|ENSG00000157741|chr7:139284473-139284473|G/-|frameshift_variant	69.6276240434122	0.14239879520340665	3				NaN	NaN	0	NaN	2729	3388	6117
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6120	21.362	NaN	1933.1	30	0	277.15	0.106			+	7754	DNNEVRFTVGL	11	45	632.3209838867188	NaN	0	632.3209838867188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DNNEVRFTVGL_	REV__ENSG00000105926|ENST00000222644|PALS2	31.068146907933308	0.4269584437765198	3				NaN	NaN	0	NaN	2730	3388	6117
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6121	21.364	NaN	1265.5	30	0	280.15	0.106	+			43634	TIQGGSFESPK	11	29	575.7891845703125	NaN	0	575.7891845703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TIQGGSFESPK_	OSBPL3|p.A257T|1|0.19|ENSG00000070882|chr7:24863504-24863504|C/T|missense_variant	30.568863376406313	0.42918353898720446	3				NaN	NaN	0	NaN	2731	3388	6117
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6122	21.365	NaN	1732.3	30	0	783.36	0.036			+	50280	WRRGGGVGPK	10	42	535.30416439628	1068.59377585936	2	535.8059692382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_WRRGGGVGPK_	REV__ENST00000457837.5_2_7:107220804-107221062:+|nuORF	19.996771675451527	0.7148376616046445	3				NaN	NaN	0	NaN	2732	3388	6117
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6134	21.391	NaN	4182.4	30	0	1148.6	0.214			+	33609	RLRKRFPG	8	41	343.8856457637859	1028.6351078915577	3	343.8853759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RLRKRFPG_	REV__ENSG00000111181|ENST00000684302|SLC6A12	21.70233525837049	0.7917639344264583	3				NaN	NaN	0	NaN	2741	3391	6133
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6135	21.394	NaN	3451.5	30	0	294.29	0.035	+			18042	IIQAKTRSL	9	51	515.3246049939056	1028.6346570546111	2	515.32470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IIQAKTRSL_	ENSG00000197892|ENST00000524189|KIF13B;KIF13B|p.K1288Rfs*13|1|0.34|ENSG00000197892|chr8:29113530-29113530|T/-|frameshift_variant	62.107414245175825	0.1960472003779324	3				NaN	NaN	0	NaN	2742	3391	6133
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6150	21.425	NaN	7347.3	30	0	986.96	0.214	+			1813	AIFQGKLEKK	10	77	581.3536598888754	1160.6927668445508	2	581.3538208007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AIFQGKLEKK_	ENSG00000118322|ENST00000327245|ATP10B	105.16503226865211	0.06235809640390954	3				NaN	NaN	0	NaN	2754	3394	6149
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6151	21.429	NaN	2964.1	30	0	728.15	0.106			+	32013	QRLPGRAALE	10	55	555.8211750954979	1109.6277972577957	2	555.8216552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QRLPGRAALE_	REV__ENSG00000155463|ENST00000612549|OXA1L;REV__nc|ENSG00000155463|Q15070-2|OXA1L	45.02220120713402	0.5028680121232791	3				NaN	NaN	0	NaN	2755	3394	6149
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6152	21.431	NaN	2340.4	30	0	297.28	0.038			+	32171	QSRMATGCLKP	11	59	596.3048095703125	NaN	0	596.3048095703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QSRMATGCLKP_	REV__PLEKHA6|p.E155Rfs*80|1|0.15|ENSG00000143850|chr1:204261367-204261367|C/-|frameshift_variant	46.45678178249821	0.34076744753725324	3				NaN	NaN	0	NaN	2756	3394	6149
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6165	21.459	NaN	4618.7	30	0	387.17	0.214	+			970	AEKAVTKEEF	10	70	576.3010869097249	1150.5876208862496	2	576.3010864257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEKAVTKEEF_	ENSG00000168028|ENST00000301821|RPSA;ENST00000478027.2_1_3:39450050-39453856:+|nuORF;nc|ENSG00000288920|A0A8I5KQE6|RPSA2	114.8945686534367	0.03454040281423369	3				NaN	NaN	0	NaN	2766	3397	6164
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6166	21.462	NaN	2579.9	30	0	817.11	0.106	+			3165	ASINRIYGL	9	44	336.1940083711477	NaN	0	336.1943664550781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASINRIYGL_	PPP1CA|p.F136L|1|0.4|ENSG00000172531|chr11:67400699-67400699|G/T|missense_variant	20.481830146152948	0.3676602570045296	3				NaN	NaN	0	NaN	2767	3397	6164
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6167	21.464	NaN	2997.4	30	0	649.76	0.038			+	13105	GGEAAEEPFKR	11	54	595.7954711914062	NaN	0	595.7954711914062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GGEAAEEPFKR_	REV__ENSG00000152784|ENST00000415738|PRDM8;REV__nc|ENSG00000152784|Q9NQV8-2|PRDM8	56.43379154798735	0.26710304324494344	3				NaN	NaN	0	NaN	2768	3397	6164
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6179	21.49	NaN	5110.2	30	0	649.07	0.143	+			6279	AVSSLIRNK	9	70	494.3017222721349	986.5888916110698	2	494.3006591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVSSLIRNK_	ENSG00000181929|ENST00000548065|PRKAG1;ENST00000546531.5_1_12:49396684-49399341:-|nuORF;ENST00000550448.5_1_12:49398244-49398481:-|nuORF;nc|ENSG00000181929|P54619-2|PRKAG1;nc|ENSG00000181929|P54619-3|PRKAG1	101.25262130126117	0.03792372629710479	3				NaN	NaN	0	NaN	2777	3400	6178
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6191	21.517	NaN	3411	30	0	423.33	0.215			+	26009	LSKSISAIR	9	55	487.80370899323725	973.5928650532745	2	487.8031921386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSKSISAIR_	REV__ENSG00000103642|ENST00000261893|LACTB;REV__LACTB|p.E253Kfs*42|1|0.25|ENSG00000103642|chr15:63127489-63127489|A/-|frameshift_variant;REV__nc|ENSG00000103642|P83111-2|LACTB	114.8945686534367	0.024290463251177924	3				NaN	NaN	0	NaN	2786	3403	6190
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6192	21.521	NaN	2478.3	30	0	398.55	0.106	+			2581	AQFGGKILRK	10	55	559.3464609531316	1116.678368973063	2	559.3460083007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AQFGGKILRK_	ENSG00000070047|ENST00000264555|PHRF1;nc|ENSG00000070047|Q9P1Y6-2|PHRF1;nc|ENSG00000070047|Q9P1Y6-3|PHRF1;PHRF1|p.E1225Kfs*62|1|0.36|ENSG00000070047|chr11:609125-609125|G/-|frameshift_variant;PHRF1|p.L1393Cfs*8|1|0.38|ENSG00000070047|chr11:609628-609628|C/-|frameshift_variant;PHRF1|p.P938Qfs*23|2|0.45|ENSG00000070047|chr11:608263-608263|C/-|frameshift_variant;PHRF1|p.T1126Pfs*73|1|0.36|ENSG00000070047|chr11:608827-608827|C/-|frameshift_variant	67.49366992349736	0.29779660154124327	3				NaN	NaN	0	NaN	2787	3403	6190
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6193	21.523	NaN	2025.7	30	0	178.5	0.036	+			40050	STNLIIHQK	9	50	527.3064444059893	1052.5983358787785	2	527.30712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STNLIIHQK_	ENSG00000196152|ENST00000342483|ZNF79	90.36981228632155	0.0638227155548745	3				NaN	NaN	0	NaN	2788	3403	6190
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6216	21.576	NaN	3355.1	30	0	517.96	0.145			+	21603	KPKNPHALRST	11	59	624.860092644303	1247.705632355406	2	624.8611450195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KPKNPHALRST_	REV__ENSG00000206053|ENST00000248098|JPT2;REV__ENST00000567717.1_1_16:1728292-1742376:+|nuORF;REV__nc|ENSG00000206053|Q9H910-2|JPT2;REV__nc|ENSG00000206053|Q9H910-3|JPT2	41.42661286455405	0.5384226294179143	3				NaN	NaN	0	NaN	2805	3409	6215
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6229	21.605	NaN	4786.1	30	0	1368	0.214	+			44843	TTTGHLIYK	9	40	345.19424662403253	1032.5609104722976	3	345.1938781738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTTGHLIYK_	EEF1A1|p.P263Lfs*27|1|0.36|ENSG00000156508|chr6:73518595-73518595|G/-|frameshift_variant;EEF1A2|p.T239Hfs*50|1|0.26|ENSG00000101210|chr20:63493194-63493195|-/G|frameshift_variant;EEF1A2|p.T239Rfs*40|1|0.31|ENSG00000101210|chr20:63493195-63493195|G/-|frameshift_variant;ENSG00000101210|ENST00000217182|EEF1A2;ENSG00000156508|ENST00000309268|EEF1A1;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	23.04248740728303	0.5879033540491928	3				NaN	NaN	0	NaN	2815	3412	6228
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6230	21.609	NaN	1424.9	30	0	471.84	0.106	+			6325	AVTDVEATR	9	33	481.2507009004075	NaN	0	481.2508850097656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVTDVEATR_	ENSG00000214078|ENST00000397443|CPNE1;ENST00000401607.6_1_20:34214165-34218368:-|nuORF;ENST00000473373.1_1_20:34214440-34214716:-|nuORF;ENST00000483495.5_1_20:34214165-34218616:-|nuORF	42.396135135203025	0.2590952873412954	3				NaN	NaN	0	NaN	2816	3412	6228
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6231	21.611	NaN	3713	30	0	506.36	0.106				-1	CDVMTYVRETC	11	42	688.787187508988	NaN	0	688.786376953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_CDVMTYVRETC(Carbamidomethyl (C))_	ENSG00000142173|ENST00000300527|COL6A2;nc|ENSG00000142173|P12110-2|COL6A2;nc|ENSG00000142173|P12110-3|COL6A2	16.71738777980365	0.456735970842152	3				NaN	NaN	0	NaN	2817	3412	6228
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6232	21.613	NaN	2091.9	30	0	360.81	0.106			+	21485	KNKKKEPID	9	40	550.32666015625	NaN	0	550.32666015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KNKKKEPID_	REV__ENSG00000145868|ENST00000340253|FBXO38;REV__FBXO38|p.S849Afs*20|1|0.38|ENSG00000145868|chr5:148427834-148427834|G/-|frameshift_variant;REV__nc|ENSG00000145868|Q6PIJ6-2|FBXO38	20.94693142431847	0.3660861156085067	3				NaN	NaN	0	NaN	2818	3412	6228
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6233	21.614	NaN	1398.3	30	0	257.57	0.034			+	17657	IEKIHVRG	8	38	476.29135391784837	NaN	0	476.29046630859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IEKIHVRG_	REV__ENSG00000150269|ENST00000279791|OR5M9	19.359975847455235	1.7418937515398478	3				NaN	NaN	0	NaN	2819	3412	6228
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6245	21.639	NaN	3582.3	30	0	766.9	0.214			+	-1	EAPGCGVNVRP	11	59	578.2822442515992	1154.5499355699983	2	578.2821655273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_EAPGC(Carbamidomethyl (C))GVNVRP_	REV__ENST00000532314.5_1_11:57413456-57414597:-|nuORF	29.170058357718403	0.683821074385409	3				NaN	NaN	0	NaN	2828	3415	6244
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6246	21.643	NaN	4474.3	30	0	540.92	0.106				-1	CVISIDRYLG	10	65	598.3119830432587	1194.6094131533173	2	598.3116455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_C(Carbamidomethyl (C))VISIDRYLG_	ENSG00000148680|ENST00000336152|HTR7;nc|ENSG00000148680|P34969-2|HTR7;nc|ENSG00000148680|P34969-3|HTR7	74.25504064058377	0.24255678544297835	3				NaN	NaN	0	NaN	2829	3415	6244
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6247	21.645	NaN	2832.5	30	0	1317.6	0.106			+	32763	RAQSHVTM	8	28	465.2355488949424	928.4565448566848	2	465.2352600097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RAQSHVTM_	REV__ENST00000418154.1_1_1:64254543-64254969:-|nuORF	20.481830146152948	0.8005983782650069	3				NaN	NaN	0	NaN	2830	3415	6244
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6248	21.646	NaN	2407.9	30	0	487.77	0.037			+	36767	SHYSEVEAEL	10	33	582.2638741056943	1162.5131952781885	2	582.2628784179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SHYSEVEAEL_	REV__ANKRD26|p.K1234Nfs*19|2|0.18|ENSG00000107890|chr10:27033330-27033330|T/-|frameshift_variant;REV__ANKRD26|p.K1452Rfs*7|1|0.29|ENSG00000107890|chr10:27017653-27017653|T/-|frameshift_variant;REV__ANKRD26|p.N1518Ifs*14|1|0.04|ENSG00000107890|chr10:27014665-27014666|-/A|frameshift_variant;REV__ANKRD26|p.N1518Lfs*11|1|0.04|ENSG00000107890|chr10:27014666-27014667|-/AGAATCATAGGAAATAA|frameshift_variant;REV__ANKRD26|p.N1659Kfs*4|1|0.3|ENSG00000107890|chr10:27006939-27006940|-/T|frameshift_variant;REV__ANKRD26|p.Y1555Ifs*2|1|0.28|ENSG00000107890|chr10:27014555-27014556|-/T|frameshift_variant;REV__ENSG00000107890|ENST00000376087|ANKRD26;REV__nc|ENSG00000107890|Q9UPS8-2|ANKRD26	15.641811463095205	0.7369665665077569	3				NaN	NaN	0	NaN	2831	3415	6244
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6259	21.672	NaN	4918.4	30	0	2809.9	0.214			+	6909	CLVFTVTISV	10	28	541.3016667040666	1080.5887804749332	2	541.3016357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CLVFTVTISV_	REV__ENSG00000140030|ENST00000267549|GPR65	15.641811463095205	0.7369665665077569	3				NaN	NaN	0	NaN	2839	3418	6258
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6260	21.676	NaN	2538.7	30	0	347.88	0.106	+			103	AAEAKWRR	8	48	494.27790959441495	986.5412662556299	2	494.2771911621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAEAKWRR_	ENST00000394921.8_1_7:75157117-75157315:-|nuORF	50.0245360154114	0.5941082100236891	3				NaN	NaN	0	NaN	2840	3418	6258
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6261	21.678	NaN	2504.3	30	0	750.2	0.106	+			4384	ATHIVTEFI	9	40	344.18960614872515	1029.5469890463755	3	344.1892395019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATHIVTEFI_	ENSG00000176198|ENST00000641082|OR11H4;nc|ENSG00000176198|Q8NGC9|OR11H4	19.359975847455235	0.6112419832031293	3				NaN	NaN	0	NaN	2841	3418	6258
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6262	21.679	NaN	3146.1	30	0	728.3	0.106			+	17497	IDEQSMDTVEM	11	26	649.2685546875	NaN	0	649.2685546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IDEQSMDTVEM_	REV__CCDC88A|p.E735Sfs*10|1|0.33|ENSG00000115355|chr2:55334619-55334619|T/-|frameshift_variant;REV__CCDC88A|p.I779Sfs*4|1|0.29|ENSG00000115355|chr2:55334486-55334486|T/-|frameshift_variant;REV__CCDC88A|p.L1472Ffs*8|1|0.35|ENSG00000115355|chr2:55303124-55303125|-/A|frameshift_variant;REV__CCDC88A|p.N1003Kfs*3|1|0.32|ENSG00000115355|chr2:55322681-55322682|-/T|frameshift_variant;REV__CCDC88A|p.N192Kfs*12|1|0.22|ENSG00000115355|chr2:55362359-55362360|-/T|frameshift_variant;REV__CCDC88A|p.T678Hfs*8|1|0.16|ENSG00000115355|chr2:55334789-55334789|T/-|frameshift_variant;REV__ENSG00000115355|ENST00000436346|CCDC88A;REV__nc|ENSG00000115355|Q3V6T2-2|CCDC88A;REV__nc|ENSG00000115355|Q3V6T2-3|CCDC88A;REV__nc|ENSG00000115355|Q3V6T2-4|CCDC88A;REV__nc|ENSG00000115355|Q3V6T2-5|CCDC88A	9.182911543092327	0.456735970842152	3				NaN	NaN	0	NaN	2842	3418	6258
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6263	21.681	NaN	1330.6	30	0	235.97	0.106	+			11737	FSGNPIKVSF	10	29	548.29638671875	NaN	0	548.29638671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FSGNPIKVSF_	ENSG00000089280|ENST00000254108|FUS;ENST00000487509.6_1_16:31199536-31202756:+|nuORF;nc|ENSG00000089280|P35637-2|FUS	12.811709888998246	0.42010282974921537	3				NaN	NaN	0	NaN	2843	3418	6258
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6264	21.683	NaN	1702.9	30	0	390	0.106			+	34089	RSPSHAQVET	10	35	556.2798461914062	NaN	0	556.2798461914062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RSPSHAQVET_	REV__ENSG00000078018|ENST00000682079|MAP2;REV__nc|ENSG00000078018|P11137-3|MAP2	21.9598887501803	0.4201028297492154	3				NaN	NaN	0	NaN	2844	3418	6258
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6265	21.685	NaN	1566.1	30	0	424.83	0.037			+	-1	APGLLSCYIE	10	27	561.7811279296875	NaN	0	561.7811279296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_APGLLSC(Carbamidomethyl (C))YIE_	REV__ENSG00000276231|ENST00000619866|PIK3R6	10.865556482863946	0.4201028297492154	3				NaN	NaN	0	NaN	2845	3418	6258
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6277	21.711	NaN	14782	30	0	1854.3	0.214	+			32072	QSASPLLHGEK	11	90	583.8120114295306	1165.609469925861	2	583.8117065429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QSASPLLHGEK_	ENST00000550178.1_1_12:120933958-120934105:+|nuORF	96.75553188499661	0.07111942461817355	3				NaN	NaN	0	NaN	2854	3421	6276
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6278	21.714	NaN	3646.1	30	0	2273.8	0.106				-1	 	0	45	535.30416439628	1068.59377585936	2	535.3040161132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2855	3421	6276
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6279	21.716	NaN	1865.4	30	0	213.44	0.106	+			39259	STANIDDLKK	10	47	552.7991136112532	1103.5836742893064	2	552.7986450195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STANIDDLKK_	ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5	45.02220120713402	0.5028680121232791	3				NaN	NaN	0	NaN	2856	3421	6276
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6280	21.718	NaN	1926.7	30	0	228.45	0.106	+			9043	EGFLRSAVP	9	48	488.2666886829536	974.5188244327072	2	488.26629638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EGFLRSAVP_	nc|ENSG00000100490|Q00532-2|CDKL1	56.72105179125745	0.24094814563026265	3				NaN	NaN	0	NaN	2857	3421	6276
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6281	21.72	NaN	1210.3	30	0	272.67	0.034	+			25021	LLGTAAAKIL	10	34	485.8180847167969	NaN	0	485.8180847167969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LLGTAAAKIL_	ENSG00000110427|ENST00000658780|KIAA1549L;KIAA1549L|p.T1376Hfs*62|1|0.19|ENSG00000110427|chr11:33606771-33606772|-/C|frameshift_variant;KIAA1549L|p.T1376Pfs*16|1|0.38|ENSG00000110427|chr11:33606772-33606772|C/-|frameshift_variant;nc|ENSG00000110427|Q6ZVL6-2|KIAA1549L;nc|ENSG00000110427|Q6ZVL6|KIAA1549L	20.94693142431847	0.4201028297492154	3				NaN	NaN	0	NaN	2858	3421	6276
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6313	21.789	NaN	1446.5	30	0	195.13	0.214	+			15372	GTVYFKEGK	9	44	514.7742821018862	NaN	0	514.77392578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTVYFKEGK_	ENSG00000004478|ENST00000001008|FKBP4	44.377184641726394	0.24544280798894275	3				NaN	NaN	0	NaN	2884	3427	6312
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6314	21.793	NaN	1141.1	30	0	293.42	0.035			+	6885	CLLSTAPRAA	10	43	334.8517194392949	1001.5333289180849	3	334.8517150878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_CLLSTAPRAA_	REV__ENST00000581302.5_1_18:21033283-21057068:+|nuORF;REV__ENST00000584052.5_1_18:21033283-21044093:+|nuORF;REV__ENST00000584960.1_1_18:21033283-21043044:+|nuORF	23.04248740728303	0.69165701907106	3				NaN	NaN	0	NaN	2885	3427	6312
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6326	21.818	NaN	13618	30	0	4170.5	0.214				-1	 	0	56	384.77237702378477	767.5302011143696	2	384.7720642089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2894	3430	6325
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6327	21.822	NaN	6124.4	30	0	2827.4	0.106			+	46865	VIKSREIK	8	53	324.878016440003	971.6122199202091	3	324.8781433105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VIKSREIK_	REV__ENSG00000156194|ENST00000286719|PPEF2;REV__nc|ENSG00000156194|O14830-2|PPEF2;REV__PPEF2|p.T315I|1|0.52|ENSG00000156194|chr4:75876663-75876663|G/A|missense_variant	25.450171626174864	0.7628259754767981	3				NaN	NaN	0	NaN	2895	3430	6325
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6328	21.824	NaN	4215.2	30	0	407.05	0.106	+			4678	ATLSEARLK	9	62	494.7935575238031	987.5725621144062	2	494.7928466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATLSEARLK_	ENSG00000153815|ENST00000537098|CMIP;nc|ENSG00000153815|Q8IY22-2|CMIP;nc|ENSG00000153815|Q8IY22-3|CMIP	120.30596017624542	0.02101454110788768	3				NaN	NaN	0	NaN	2896	3430	6325
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6329	21.826	NaN	7484.6	30	0	3997.7	0.106			+	31299	QIHIEKLLV	9	47	364.89756920786004	1091.6708782237802	3	364.89739990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QIHIEKLLV_	REV__BIRC6|p.K3585Sfs*8|1|0.32|ENSG00000115760|chr2:32515171-32515171|A/-|frameshift_variant;REV__BIRC6|p.S3504Mfs*5|1|0.15|ENSG00000115760|chr2:32513095-32513098|TAGT/-|frameshift_variant;REV__ENSG00000115760|ENST00000421745|BIRC6;REV__ENST00000497023.1_1_2:32727936-32730277:+|nuORF	20.94693142431847	0.6074874384046576	3				NaN	NaN	0	NaN	2897	3430	6325
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6330	21.827	NaN	4164.4	30	0	521.24	0.106	+			38595	SSGFVAIKK	9	61	468.77967542500824	935.5447979168165	2	468.77935791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSGFVAIKK_	ENSG00000198478|ENST00000369838|SH3BGRL2;SH3BGRL2|p.P55Rfs*41|2|0.28|ENSG00000198478|chr6:79673727-79673727|C/-|frameshift_variant	110.11987700582712	0.028875675806141952	3				NaN	NaN	0	NaN	2898	3430	6325
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6331	21.829	NaN	1224.4	30	0	259.77	0.106				-1	ATCGELLRH	9	43	528.7672729492188	NaN	0	528.7672729492188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_ATC(Carbamidomethyl (C))GELLRH_	ENSG00000168434|ENST00000307149|COG7	51.19269402634007	0.19847346126499396	3				NaN	NaN	0	NaN	2899	3430	6325
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6332	21.831	NaN	1958.8	30	0	603.94	0.035			+	11106	FFKNPALGL	9	47	336.1940083711477	NaN	0	336.1939392089844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FFKNPALGL_	REV__ENSG00000172795|ENST00000389063|DCP2;REV__ENST00000508359.1_1_5:112336867-112343781:+|nuORF;REV__ENST00000512751.5_1_5:112312677-112343644:+|nuORF;REV__nc|ENSG00000172795|Q8IU60-2|DCP2	21.9598887501803	0.3626577482100488	3				NaN	NaN	0	NaN	2900	3430	6325
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6344	21.857	NaN	7548.4	30	0	780.17	0.214	+			14071	GSLASVYHK	9	63	481.2587006649288	960.5028483966577	2	481.258544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSLASVYHK_	AP2B1|p.N760Ifs*17|1|0.37|ENSG00000006125|chr17:35674314-35674314|A/-|frameshift_variant;ENSG00000006125|ENST00000610402|AP2B1;ENST00000588116.1_1_17:33977635-33977996:+|nuORF;nc|ENSG00000006125|P63010-3|AP2B1;nc|ENSG00000006125|P63010|AP2B1	118.74307786436346	0.02196067127630568	3				NaN	NaN	0	NaN	2909	3433	6343
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6345	21.86	NaN	3235.6	30	0	1466.7	0.106				-1	SLLFLAVMYV	10	41	391.2192216278816	1170.6358354838449	3	391.21893310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_SLLFLAVM(Oxidation (M))YV_	ENSG00000198885|ENST00000439118|ITPRIPL1;ITPRIPL1|p.L296Ffs*5|1|0.33|ENSG00000198885|chr2:96327516-96327517|-/T|frameshift_variant;ITPRIPL1|p.V370Cfs*11|1|0.08|ENSG00000198885|chr2:96327735-96327735|G/-|frameshift_variant;nc|ENSG00000198885|Q6GPH6-2|ITPRIPL1;nc|ENSG00000198885|Q6GPH6-3|ITPRIPL1	36.446750945000026	0.5818864909973037	3				NaN	NaN	0	NaN	2910	3433	6343
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6346	21.862	NaN	1866.6	30	0	504	0.106	+			15439	GTYSKIMNH	9	52	525.7554721856716	1049.496391438143	2	525.7557983398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTYSKIMNH_	ENSG00000067900|ENST00000399799|ROCK1;ROCK1|p.I1150Nfs*5|1|0.23|ENSG00000067900|chr18:20959903-20959904|-/T|frameshift_variant;ROCK1|p.K1307Nfs*3|1|0.28|ENSG00000067900|chr18:20953718-20953718|T/-|frameshift_variant;ROCK1|p.K818Efs*6|1|0.51|ENSG00000067900|chr18:20984387-20984388|TT/-|frameshift_variant;ROCK1|p.N871Kfs*14|1|0.07|ENSG00000067900|chr18:20979951-20979952|-/T|frameshift_variant;ROCK1|p.N871Tfs*5|1|0.29|ENSG00000067900|chr18:20979952-20979952|T/-|frameshift_variant;ROCK1|p.P1257Lfs*3|1|0.21|ENSG00000067900|chr18:20954866-20954866|G/-|frameshift_variant	35.15202426646627	0.4747332964206883	3				NaN	NaN	0	NaN	2911	3433	6343
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6347	21.864	NaN	1424.6	30	0	346.97	0.037			+	20531	KFIVDIEALT	10	47	574.8302612304688	NaN	0	574.8302612304688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KFIVDIEALT_	REV__ENSG00000173821|ENST00000582970|RNF213;REV__ENST00000559070.5_1_17:78261823-78310301:+|nuORF;REV__nc|ENSG00000173821|Q63HN8-4|RNF213;REV__nc|ENSG00000173821|Q63HN8|RNF213;REV__RNF213|p.C5022Lfs*7|1|0.3|ENSG00000173821|chr17:80389237-80389237|G/-|frameshift_variant;REV__RNF213|p.P2167Lfs*64|1|0.09|ENSG00000173821|chr17:80344834-80344835|-/T|frameshift_variant;REV__RNF213|p.Q1953Rfs*50|2|0.13|ENSG00000173821|chr17:80340219-80340219|C/-|frameshift_variant	47.657333605630114	0.3204131577145918	3				NaN	NaN	0	NaN	2912	3433	6343
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6363	21.898	NaN	5968.5	30	0	661.83	0.145	+			1774	AICQWERNK	9	80	602.7984067534805	NaN	0	602.7985229492188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_AIC(Carbamidomethyl (C))QWERNK_	ENSG00000140526|ENST00000352732|ABHD2	145.15565482312357	0.0012548246736834398	3				NaN	NaN	0	NaN	2925	3436	6362
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6375	21.925	NaN	1234.7	30	0	167.53	0.214			+	39588	STGRPIGSYQ	10	32	533.2705688476562	NaN	0	533.2705688476562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STGRPIGSYQ_	REV__ENST00000300452.7_1_9:131096069-131096330:+|nuORF	23.52269567125451	0.42010282974921537	3				NaN	NaN	0	NaN	2934	3439	6374
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6376	21.929	NaN	2382.1	30	0	539.66	0.036	+			35399	SAQNTKFFK	9	62	535.7852433717228	1069.5559338102455	2	535.7854614257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAQNTKFFK_	ENSG00000140259|ENST00000267812|MFAP1;ENST00000484386.1_1_15:44097294-44102132:-|nuORF	42.86426827375447	0.38666266728046506	3				NaN	NaN	0	NaN	2935	3439	6374
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6388	21.954	NaN	7863.3	30	0	3320.5	0.214			+	48403	VTIIRIILV	9	61	347.2462976109971	1038.7170634331912	3	347.2459716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTIIRIILV_	REV__PRCC|p.E322Nfs*105|1|0.15|ENSG00000143294|chr1:156787047-156787047|C/-|frameshift_variant	37.81151784470057	0.4459294069877048	3				NaN	NaN	0	NaN	2944	3442	6387
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6389	21.958	NaN	1183.6	30	0	137.72	0.032	+			18575	ISPHGNAL	8	41	404.7189573676182	807.4233618020364	2	404.71875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ISPHGNAL_	ENSG00000166855|ENST00000300107|CLPX;ENST00000558103.1_1_15:65450907-65451087:-|nuORF;ENST00000558958.1_1_15:65449172-65477491:-|nuORF	76.7741389293348	0.3504530765139327	3				NaN	NaN	0	NaN	2945	3442	6387
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6400	21.983	NaN	1772.2	30	0	268.64	0.144				-1	 	0	38	490.28829614680706	978.5620393604141	2	490.2875671386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2953	3445	6399
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6413	22.012	NaN	1582.7	30	0	359.81	0.214	+			12941	GESSGKNVTL	10	47	496.25750067254864	990.5004484118973	2	496.25640869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GESSGKNVTL_	ENSG00000174444|ENST00000307961|RPL4;ENST00000561554.5_1_15:66795666-66797161:-|nuORF;ENST00000561775.5_1_15:66795189-66797161:-|nuORF;ENST00000564439.5_1_15:66793756-66797161:-|nuORF;ENST00000566039.5_1_15:66793707-66797161:-|nuORF;ENST00000566622.5_1_15:66794044-66797161:-|nuORF;ENST00000566624.5_1_15:66794944-66797161:-|nuORF;ENST00000567229.5_1_15:66795359-66797161:-|nuORF	36.527901853580055	0.5811387260217952	3				NaN	NaN	0	NaN	2963	3448	6412
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6414	22.016	NaN	2075.2	30	0	499.72	0.106				-1	 	0	44	420.30781003097513	838.6010671287503	2	420.3070983886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	2964	3448	6412
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6415	22.018	NaN	2133.7	30	0	410.38	0.038	+			45087	TVIDSQTHYR	10	44	610.30712890625	NaN	0	610.30712890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVIDSQTHYR_	ENSG00000166557|ENST00000299705|TMED3	32.75053402867276	0.3926392905881664	3				NaN	NaN	0	NaN	2965	3448	6412
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6428	22.045	NaN	7381.6	30	0	1985	0.214	+			31097	QFQHLVAFK	9	67	559.3117620508439	1116.6089711684876	2	559.3115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QFQHLVAFK_	ENST00000352732.9_1_15:89738886-89738976:+|nuORF	87.75429964447693	0.0711966946989736	3				NaN	NaN	0	NaN	2975	3451	6427
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6429	22.049	NaN	2230.6	30	0	485.5	0.037			+	24024	LEEIIIFQF	9	58	576.3196885085227	NaN	0	576.3198852539062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LEEIIIFQF_	REV__ENSG00000196074|ENST00000357552|SYCP2;REV__SYCP2|p.S1456Afs*9|1|0.28|ENSG00000196074|chr20:59865820-59865820|T/-|frameshift_variant	42.86426827375447	0.2558691296974908	3				NaN	NaN	0	NaN	2976	3451	6427
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6442	22.076	NaN	1846.9	30	0	154.35	0.214	+			412	AASTVFIRK	9	54	496.7979715538794	NaN	0	496.7981262207031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AASTVFIRK_	ENST00000306910.8_1_19:58929128-58929233:+|nuORF	45.97224482568171	0.23445038899310136	3				NaN	NaN	0	NaN	2986	3454	6441
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6443	22.08	NaN	2506.6	30	0	214.32	0.036			+	12172	GALPPDDLASI	11	62	534.7821715939635	1067.549790254727	2	534.7833251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GALPPDDLASI_	REV__ENSG00000126464|ENST00000418929|PRR12;REV__nc|ENSG00000126464|Q9ULL5-2|PRR12	25.57405402267927	0.7215402271931856	3				NaN	NaN	0	NaN	2987	3454	6441
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6455	22.105	NaN	13081	30	0	1532.1	0.214	+			14791	GTLASVYHK	9	74	488.26685470342846	974.519156473657	2	488.26629638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTLASVYHK_	ENSG00000100280|ENST00000357586|AP1B1;nc|ENSG00000100280|Q10567-2|AP1B1;nc|ENSG00000100280|Q10567-3|AP1B1;nc|ENSG00000100280|Q10567-4|AP1B1	134.81075121484326	0.012914550297035062	3				NaN	NaN	0	NaN	2996	3457	6454
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6456	22.109	NaN	1618.3	30	0	556.77	0.106			+	26676	LVGLSPVDKA	10	43	333.5346836123295	997.5822214371885	3	333.53448486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LVGLSPVDKA_	REV__BAZ2A|p.K1507Qfs*26|1|0.27|ENSG00000076108|chr12:56600770-56600771|-/G|frameshift_variant;REV__ENSG00000076108|ENST00000549884|BAZ2A;REV__ENST00000551759.1_1_12:56998820-56999634:-|nuORF;REV__nc|ENSG00000076108|Q9UIF9-2|BAZ2A;REV__nc|ENSG00000076108|Q9UIF9-3|BAZ2A;REV__nc|ENSG00000076108|Q9UIF9|BAZ2A	38.80614096846853	0.5601458937078225	3				NaN	NaN	0	NaN	2997	3457	6454
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6457	22.111	NaN	1598.6	30	0	135.95	0.035	+			37216	SKLFVHHR	8	46	512.2954752606327	1022.5763975880653	2	512.296142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SKLFVHHR_	ENSG00000227124|ENST00000652011|ZNF717	23.04248740728303	0.7814162927298575	3				NaN	NaN	0	NaN	2998	3457	6454
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6469	22.137	NaN	16202	30	0	3647.4	0.214	+			14365	GTADVHFER	9	66	516.2488839247817	1030.4832149163633	2	516.2489624023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTADVHFER_	ENSG00000183684|ENST00000505490|ALYREF;ENST00000512673.1_1_17:79846815-79848630:-|nuORF;nc|ENSG00000183684|Q86V81|ALYREF	131.115847015877	0.014647977962315902	3				NaN	NaN	0	NaN	3007	3460	6468
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6470	22.14	NaN	3817	30	0	743.04	0.106	+			3692	ATAAAIGATPR	11	67	500.2829009171713	998.5512489011426	2	500.2823486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATAAAIGATPR_	ENSG00000137497|ENST00000393695|NUMA1;ENST00000540626.5_1_11:71714575-71718510:-|nuORF;nc|ENSG00000137497|Q14980-2|NUMA1;nc|ENSG00000137497|Q14980-5|NUMA1	94.4091291819064	0.0807249280027251	3				NaN	NaN	0	NaN	3008	3460	6468
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6471	22.142	NaN	3421.1	30	0	533.09	0.106	+			1750	AIAEAMKVK	9	60	480.7808358886696	959.5471188441393	2	480.7803955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AIAEAMKVK_	DACH1|p.R518Gfs*25|1|0.29|ENSG00000276644|chr13:71557042-71557042|T/-|frameshift_variant;DACH1|p.T596Nfs*2|1|0.28|ENSG00000276644|chr13:71479252-71479253|-/T|frameshift_variant;ENSG00000276644|ENST00000613252|DACH1;nc|ENSG00000276644|Q9UI36-3|DACH1;nc|ENSG00000276644|Q9UI36|DACH1	104.0567914643314	0.03506238181059741	3				NaN	NaN	0	NaN	3009	3460	6468
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6472	22.144	NaN	3614.7	30	0	617.59	0.106			+	-1	YQLCCLIHN	9	50	582.269893139136	1162.525233345072	2	582.7720336914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_YQLC(Carbamidomethyl (C))CLIHN_	REV__ENST00000412485.1_1_X:13284980-13285373:-|nuORF	23.04248740728303	0.5879033540491928	3				NaN	NaN	0	NaN	3010	3460	6468
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6473	22.146	NaN	2789.5	30	0	760.5	0.036				-1	NEDMVFRE	8	39	528.2281822981381	1054.4418116630761	2	528.2276611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_NEDM(Oxidation (M))VFRE_	EDIL3|p.G273E|1|0.11|ENSG00000164176|chr5:84064834-84064834|C/T|missense_variant	37.15910966729921	0.6739408393984688	3				NaN	NaN	0	NaN	3011	3460	6468
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6486	22.174	NaN	6420	30	0	1904.6	0.214				-1	 	0	53	384.77234706794957	767.5301412026992	2	384.77215576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3021	3463	6485
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6487	22.177	NaN	4228	30	0	425.27	0.106			+	-1	VCKVGTPYM	9	69	338.49833391607564	1012.4731723484269	3	338.4979553222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_VCKVGTPYM(Oxidation (M))_	REV__ENST00000215862.8_1_22:31363581-31363752:-|nuORF	25.57405402267927	0.5642445186134241	3				NaN	NaN	0	NaN	3022	3463	6485
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6488	22.179	NaN	4397	30	0	931.79	0.038			+	50022	WDEPERITR	9	46	601.303215103827	1200.591877274454	2	601.3036499023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_WDEPERITR_	REV__ENSG00000167523|ENST00000579310|SPATA33;REV__ENST00000565890.1_1_16:89724550-89735902:+|nuORF;REV__nc|ENSG00000167523|Q96N06|SPATA33	54.722347961057174	0.257609425301511	3				NaN	NaN	0	NaN	3023	3463	6485
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6512	22.234	NaN	2561.1	30	0	758.06	0.214			+	50237	WPGGPPLLVA	10	48	336.1940866929686	NaN	0	336.1939697265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WPGGPPLLVA_	REV__ENSG00000124587|ENST00000304611|PEX6;REV__nc|ENSG00000124587|Q13608-2|PEX6;REV__nc|ENSG00000124587|Q13608-3|PEX6	24.519189625965996	0.41966695327750003	3				NaN	NaN	0	NaN	3041	3469	6511
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6513	22.237	NaN	1586.2	30	0	175.88	0.106	+			45442	TVYRGLVQK	9	52	532.3164496294827	1062.6183463257653	2	532.3167114257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVYRGLVQK_	ENSG00000148291|ENST00000371964|SURF2	42.33807565288922	0.3928346960664841	3				NaN	NaN	0	NaN	3042	3469	6511
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6514	22.239	NaN	2484	30	0	623.84	0.038				-1	ATCDHPYIVK	10	41	602.2967194222507	1202.5788859113013	2	602.294189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_ATC(Carbamidomethyl (C))DHPYIVK_	ENSG00000072786|ENST00000176763|STK10;ENST00000519710.1_1_5:171533786-171583726:-|nuORF;STK10|p.T526Pfs*15|3|0.11|ENSG00000072786|chr5:172090341-172090341|T/-|frameshift_variant	23.52269567125451	0.6877354443478558	3				NaN	NaN	0	NaN	3043	3469	6511
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6527	22.267	NaN	3394.2	30	0	467.44	0.214	+			3395	ASQEIAEKALK	11	75	594.3352623531862	1186.6559717731723	2	594.3349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASQEIAEKALK_	ENSG00000126945|ENST00000316594|HNRNPH2;ENSG00000169045|ENST00000393432|HNRNPH1;ENST00000522958.5_1_5:179046175-179048291:-|nuORF;HNRNPH2|p.L296Yfs*20|1|0.57|ENSG00000126945|chrX:101412869-101412869|G/-|frameshift_variant	56.295219882781154	0.35652538189487115	3				NaN	NaN	0	NaN	3053	3472	6526
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6528	22.271	NaN	1046.5	30	0	154.85	0.034	+			26682	LVGSNSAAEL	10	40	480.7530517578125	NaN	0	480.7530517578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LVGSNSAAEL_	tr|U7T735|U7T735_FUSNUPhageterminaselargesubunitOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00101PE=3SV=1	36.446750945000026	0.3805027428805705	3				NaN	NaN	0	NaN	3054	3472	6526
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6540	22.296	NaN	3259.4	30	0	830.01	0.214	+			122	AAFGGTFKK	9	53	463.7586572639789	925.5027615947578	2	463.7584228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAFGGTFKK_	ENSG00000100979|ENST00000372431|PLTP;nc|ENSG00000100979|P55058-4|PLTP;PLTP|p.H154R|1|0.38|ENSG00000100979|chr20:45909540-45909540|T/C|missense_variant	71.87747018426188	0.13267044672804276	3				NaN	NaN	0	NaN	3063	3475	6539
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6541	22.3	NaN	2873.6	30	0	592.26	0.106	+			19691	KDRDVKKLS	9	51	544.8249993634062	1087.6354457936122	2	544.824951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KDRDVKKLS_	tr|U7SS58|U7SS58_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01553PE=4SV=1	44.377184641726394	0.36891676396732553	3				NaN	NaN	0	NaN	3064	3475	6539
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6542	22.302	NaN	1747.4	30	0	273.35	0.106			+	8197	EAAVREAVAIA	11	51	550.3094310558888	NaN	0	550.309326171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EAAVREAVAIA_	REV__ENSG00000047188|ENST00000161863|YTHDC2;REV__YTHDC2|p.N676Tfs*9|1|0.46|ENSG00000047188|chr5:113553824-113553824|A/-|frameshift_variant	47.95952297671804	0.32997419910078585	3				NaN	NaN	0	NaN	3065	3475	6539
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6543	22.303	NaN	1462	30	0	174	0.106	+			18557	ISNLPTVKK	9	47	500.3134813212813	NaN	0	500.3133850097656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ISNLPTVKK_	ENSG00000174156|ENST00000211122|GSTA3;ENSG00000182793|ENST00000370989|GSTA5;ENSG00000243955|ENST00000334575|GSTA1;ENSG00000244067|ENST00000493422|GSTA2;GSTA1|p.L198P|1|0.14|ENSG00000243955|chr6:52791934-52791934|A/G|missense_variant	40.05817265558897	0.275207446262312	3				NaN	NaN	0	NaN	3066	3475	6539
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6544	22.305	NaN	481.36	30	0	98.218	0.032	+			31809	QPNPGDAL	8	29	406.2002258300781	NaN	0	406.2002258300781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QPNPGDAL_	nc|ENSG00000141985|Q99961-2|SH3GL1	40.5726180659479	1.7418937515398478	3				NaN	NaN	0	NaN	3067	3475	6539
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6570	22.363	NaN	2676.8	30	0	445.57	0.214	+			3383	ASQCGSLIGK	10	50	510.7609869408844	1019.5074209485688	2	510.760498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_ASQC(Carbamidomethyl (C))GSLIGK_	ENSG00000090097|ENST00000461554|PCBP4;ENSG00000183570|ENST00000681687|PCBP3;ENSG00000197111|ENST00000546463|PCBP2;ENST00000468429.5_1_21:47321003-47359956:+|nuORF;ENST00000492809.5_1_3:51992079-51994784:-|nuORF;ENST00000497390.5_1_3:51992079-51994784:-|nuORF;ENST00000547717.1_1_12:53848575-53861193:+|nuORF;ENST00000548190.1_1_12:53849722-53854210:+|nuORF;nc|ENSG00000090097|P57723-2|PCBP4;nc|ENSG00000183570|P57721-2|PCBP3;nc|ENSG00000183570|P57721-3|PCBP3;nc|ENSG00000183570|P57721-4|PCBP3;nc|ENSG00000183570|P57721-5|PCBP3;nc|ENSG00000197111|Q15366-2|PCBP2;nc|ENSG00000197111|Q15366-4|PCBP2;nc|ENSG00000197111|Q15366-5|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;nc|ENSG00000197111|Q15366-7|PCBP2;nc|ENSG00000197111|Q15366-8|PCBP2;nc|ENSG00000197111|Q15366|PCBP2;PCBP2|p.T202Kfs*26|1|0.32|ENSG00000197111|chr12:53464773-53464773|C/-|frameshift_variant;PCBP4|p.G203Efs*11|1|0.1|ENSG00000090097|chr3:51959397-51959398|-/CTCT|frameshift_variant	59.93077597824379	0.36646980200755325	3				NaN	NaN	0	NaN	3087	3481	6569
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6571	22.366	NaN	1747.8	30	0	408.21	0.037	+			40008	STMSIRVTQK	10	55	575.8163452148438	NaN	0	575.8163452148438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STMSIRVTQK_	nc|ENSG00000170421|P05787-2|KRT8	38.753607047826485	0.3729281687199363	3				NaN	NaN	0	NaN	3088	3481	6569
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6589	22.402	NaN	5647.2	30	0	1019.8	0.214	+			47030	VLCPPPVKK	9	62	490.8020661235765	979.589579313953	2	490.8015441894531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VLCPPPVKK_	ENSG00000136238|ENST00000348035|RAC1;ENSG00000169750|ENST00000306897|RAC3;ENST00000419413.1_1_X:136523419-136523611:-|nuORF;ENST00000488373.5_1_7:6415539-6442074:+|nuORF;nc|ENSG00000136238|P63000-2|RAC1	79.71258880314673	0.09879134589249085	3				NaN	NaN	0	NaN	3103	3484	6588
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6590	22.406	NaN	2170.8	30	0	274.38	0.106	+			49782	VYRDQNKY	8	46	543.273048740709	NaN	0	543.2738037109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYRDQNKY_	ENSG00000104892|ENST00000391946|KLC3;ENSG00000126214|ENST00000334553|KLC1;ENSG00000137171|ENST00000347162|KLC4;ENSG00000174996|ENST00000394067|KLC2;ENST00000467906.5_1_6:43030654-43039600:+|nuORF;KLC1|p.N469Tfs*18|1|0.15|ENSG00000126214|chr14:103677436-103677436|A/-|frameshift_variant;nc|ENSG00000104892|Q6P597-2|KLC3;nc|ENSG00000104892|Q6P597-3|KLC3;nc|ENSG00000126214|Q07866-10|KLC1;nc|ENSG00000126214|Q07866-2|KLC1;nc|ENSG00000126214|Q07866-3|KLC1;nc|ENSG00000126214|Q07866-4|KLC1;nc|ENSG00000126214|Q07866-5|KLC1;nc|ENSG00000126214|Q07866-6|KLC1;nc|ENSG00000126214|Q07866-7|KLC1;nc|ENSG00000126214|Q07866-8|KLC1;nc|ENSG00000126214|Q07866|KLC1;nc|ENSG00000137171|Q9NSK0-3|KLC4;nc|ENSG00000137171|Q9NSK0-4|KLC4;nc|ENSG00000137171|Q9NSK0-5|KLC4;nc|ENSG00000174996|Q9H0B6-2|KLC2	45.9519527083369	1.7418937515398478	3				NaN	NaN	0	NaN	3104	3484	6588
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6591	22.408	NaN	1718.4	30	0	325.32	0.106	+			5830	AVIGNVQEK	9	46	479.27181195915705	956.5290709851141	2	479.27215576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVIGNVQEK_	ENSG00000124786|ENST00000644923|SLC35B3;nc|ENSG00000124786|Q9H1N7-3|SLC35B3	85.16082228582465	0.07850854922700509	3				NaN	NaN	0	NaN	3105	3484	6588
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6592	22.41	NaN	1811.2	30	0	179.9	0.106	+			48289	VTDSPRILK	9	52	514.8088033673524	1027.6030538015048	2	514.8085327148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTDSPRILK_	ENSG00000142197|ENST00000691173|DOP1B;nc|ENSG00000142197|Q9Y3R5-2|DOP1B	99.01295224348159	0.040209060045561164	3				NaN	NaN	0	NaN	3106	3484	6588
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6593	22.412	NaN	2450.6	30	0	527.17	0.036	+			12196	GAPLRWGIFT	10	45	559.3117620508439	1116.6089711684876	2	559.8115844726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GAPLRWGIFT_	ENSG00000133687|ENST00000539277|TMTC1;TMTC1|p.E735Kfs*5|1|0.3|ENSG00000133687|chr12:29516454-29516454|T/-|frameshift_variant	25.57405402267927	0.6709832231498071	3				NaN	NaN	0	NaN	3107	3484	6588
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6607	22.441	NaN	7514.6	30	0	1485.2	0.214	+			39924	STMDLVKSK	9	74	504.7736523958799	1007.5327518585598	2	504.7732849121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STMDLVKSK_	ENSG00000107625|ENST00000373585|DDX50	96.0336014099291	0.047854655524928534	3				NaN	NaN	0	NaN	3118	3487	6606
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6608	22.445	NaN	6502.9	30	0	2246.8	0.106			+	-1	STVMKADKL	9	56	336.8514851307706	1007.5326259925118	3	336.8513488769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_STVM(Oxidation (M))KADKL_	REV__ENSG00000182957|ENST00000382108|SPATA13;REV__ENST00000466831.2_1_13:24796959-24798912:+|nuORF	24.519189625965996	0.574102787014149	3				NaN	NaN	0	NaN	3119	3487	6606
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6609	22.447	NaN	7995.3	30	0	794.04	0.106	+			3804	ATAGIIGVNRK	11	68	550.3332315597987	1098.6519101863973	2	550.3329467773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATAGIIGVNRK_	CLTC-CEP95|1|fusion;CLTC|p.A1374*|1|0.05|ENSG00000141367|chr17:59683464-59683465|-/TA|frameshift_variant;CLTC|p.D632Yfs*7|1|0.15|ENSG00000141367|chr17:59666589-59666590|-/TTACA|frameshift_variant;ENSG00000141367|ENST00000269122|CLTC;ENST00000472129.3_1_17:57725612-57733400:+|nuORF;nc|ENSG00000141367|Q00610-2|CLTC	115.23196543181992	0.02934640941715571	3				NaN	NaN	0	NaN	3120	3487	6606
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6610	22.449	NaN	1199.3	30	0	171.72	0.034	+			43023	TEKSPNPSL	9	45	486.75314638971577	NaN	0	486.75335693359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TEKSPNPSL_	ENSG00000127481|ENST00000375254|UBR4;ENST00000419533.1_1_1:19477984-19504233:-|nuORF;nc|ENSG00000127481|Q5T4S7-2|UBR4;nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000127481|Q5T4S7-4|UBR4;nc|ENSG00000127481|Q5T4S7-5|UBR4;UBR4|p.C4515Wfs*2|1|0.06|ENSG00000127481|chr1:19095626-19095626|G/-|frameshift_variant;UBR4|p.L4771Cfs*7|1|0.25|ENSG00000127481|chr1:19088878-19088878|G/-|frameshift_variant;UBR4|p.P4047Ifs*4|1|0.4|ENSG00000127481|chr1:19106932-19106933|GG/-|frameshift_variant	35.15202426646627	0.3000918603816441	3				NaN	NaN	0	NaN	3121	3487	6606
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6621	22.474	NaN	2612.5	30	0	1005.5	0.214	+			26709	LVKALKSAAP	10	44	333.21849881564117	996.6336670471235	3	333.2182312011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LVKALKSAAP_	ENSG00000176771|ENST00000409261|NCKAP5;nc|ENSG00000176771|O14513-2|NCKAP5	24.519189625965996	0.6795976720565101	3				NaN	NaN	0	NaN	3129	3490	6620
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6622	22.478	NaN	4563.5	30	0	622.55	0.106			+	-1	VVAGAVTMQQC	11	65	590.2780330614942	1178.5415131897882	2	590.2785034179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_VVAGAVTM(Oxidation (M))QQC(Carbamidomethyl (C))_	REV__ENSG00000070214|ENST00000374720|SLC44A1;REV__nc|ENSG00000070214|Q8WWI5-2|SLC44A1;REV__nc|ENSG00000070214|Q8WWI5-3|SLC44A1	37.81151784470057	0.5878881669006212	3				NaN	NaN	0	NaN	3130	3490	6620
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6623	22.48	NaN	2114.4	30	0	489.43	0.106	+			24171	LENQSHETL	9	51	535.7593810177722	NaN	0	535.7598876953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LENQSHETL_	ENSG00000132688|ENST00000368223|NES;NES|p.A1050Pfs*14|1|0.36|ENSG00000132688|chr1:156671040-156671040|C/-|frameshift_variant;NES|p.P1439Qfs*11|1|0.19|ENSG00000132688|chr1:156669874-156669874|C/-|frameshift_variant;NES|p.V1249Cfs*11|1|0.37|ENSG00000132688|chr1:156670443-156670443|C/-|frameshift_variant	54.722347961057174	0.17414871455573902	3				NaN	NaN	0	NaN	3131	3490	6620
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6624	22.482	NaN	2162.3	30	0	382.1	0.106			+	31437	QKPSKNKK	8	46	479.2953746021165	956.576196271033	2	479.29534912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QKPSKNKK_	REV__nc|ENSG00000187239|Q96RU3-3|FNBP1	58.78195531508484	0.5138399468736706	3				NaN	NaN	0	NaN	3132	3490	6620
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6625	22.483	NaN	1020.8	30	0	187.61	0.034	+			37999	SPLDAPFPA	9	32	457.7340087890625	NaN	0	457.7340087890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SPLDAPFPA_	ENSG00000135625|ENST00000436467|EGR4;nc|ENSG00000135625|Q05215|EGR4	24.20275056022122	0.35506675290109213	3				NaN	NaN	0	NaN	3133	3490	6620
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6637	22.509	NaN	1789.9	30	0	305.3	0.214			+	12653	GEIKLTMQQ	9	47	532.2756118899803	1062.5366708467604	2	532.2762451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_GEIKLTM(Oxidation (M))QQ_	REV__C3|p.A1045Pfs*26|1|0.09|ENSG00000125730|chr19:6694452-6694452|C/-|frameshift_variant;REV__C3|p.S1008Rfs*8|3|0.41|ENSG00000125730|chr19:6694564-6694564|G/-|frameshift_variant;REV__ENSG00000125730|ENST00000245907|C3	72.87924865735499	0.12833875048249987	3				NaN	NaN	0	NaN	3142	3493	6636
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6638	22.513	NaN	1062.2	30	0	149.26	0.034	+			8153	EAAINRHR	8	37	483.76679842025544	965.5190439073109	2	483.7660827636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EAAINRHR_	ENSG00000172053|ENST00000306125|QARS1;ENST00000479495.5_1_3:49140063-49142467:-|nuORF;nc|ENSG00000172053|P47897-2|QARS1	37.15910966729921	0.6739408393984688	3				NaN	NaN	0	NaN	3143	3493	6636
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6651	22.54	NaN	3067.6	30	0	1186.1	0.214	+			26236	LSSPRRNH	8	65	322.8466919429043	965.5182464289128	3	322.8467102050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSSPRRNH_	nc|ENSG00000175779|Q8NAA6|LINC02694	24.20275056022122	0.7724576178584145	3				NaN	NaN	0	NaN	3153	3496	6650
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6652	22.544	NaN	2690.1	30	0	402.67	0.039				-1	WNLTPHLCRP	10	54	647.3299639723464	1292.6453750114927	2	647.3289794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_WNLTPHLC(Carbamidomethyl (C))RP_	ENST00000610085.1_1_7:148395177-148395648:-|nuORF	39.252832667884924	0.5560298534376815	3				NaN	NaN	0	NaN	3154	3496	6650
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6664	22.569	NaN	9395.2	30	0	2131.1	0.214			+	10275	ETLSKGLVVA	10	83	339.5378856370546	1015.5918275113638	3	339.5376281738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ETLSKGLVVA_	REV__ENSG00000124406|ENST00000381668|ATP8A1;REV__nc|ENSG00000124406|Q9Y2Q0-2|ATP8A1;REV__nc|ENSG00000124406|Q9Y2Q0-3|ATP8A1	42.396135135203025	0.5270658956260207	3				NaN	NaN	0	NaN	3163	3499	6663
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6665	22.573	NaN	2112.2	30	0	587.18	0.106			+	43290	TFLDFTKC	8	36	487.73513806227385	NaN	0	487.7353515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TFLDFTKC_	REV__ENSG00000137200|ENST00000373451|CMTR1	19.359975847455235	1.7418937515398478	3				NaN	NaN	0	NaN	3164	3499	6663
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6666	22.575	NaN	1546.6	30	0	609.17	0.036			+	9037	EGERKGNVY	9	39	351.1782506898044	1050.512922669613	3	351.17803955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EGERKGNVY_	REV__tr|U7SGG1|U7SGG1_FUSNUToxin-antitoxinsystemYwqKfamilyantitoxin(Fragment)OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02208PE=4SV=1;REV__tr|U7T3F2|U7T3F2_FUSNUPhophatidylinositol-4-phosphate5-kinaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00619PE=4SV=1	20.481830146152948	0.6112419832031293	3				NaN	NaN	0	NaN	3165	3499	6663
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6678	22.601	NaN	13694	30	0	6320.9	0.214				-1	ASKFMTHVA	9	66	336.50425248945453	1006.4909280685636	3	336.50408935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ASKFM(Oxidation (M))THVA_	ENSG00000113272|ENST00000231198|THG1L	27.882242232435846	0.5426732730940306	3				NaN	NaN	0	NaN	3174	3502	6677
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6679	22.604	NaN	1790.1	30	0	227.88	0.106	+			37099	SISQVLNKK	9	50	508.8089123015734	1015.6032716699468	2	508.80853271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SISQVLNKK_	ENST00000330689.5_1_3:122134566-122134782:-|nuORF	62.107414245175825	0.1960472003779324	3				NaN	NaN	0	NaN	3175	3502	6677
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6680	22.606	NaN	1774.6	30	0	140.36	0.106	+			38040	SPPVSPCFR	9	57	330.5007308401542	NaN	0	330.5004577636719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SPPVSPCFR_	ENST00000377110.7_2_9:73461461-73477999:-|nuORF	21.9598887501803	0.3626577482100488	3				NaN	NaN	0	NaN	3176	3502	6677
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6681	22.608	NaN	1090.7	30	0	159.45	0.035			+	30926	QELIKIQR	8	42	514.3174438476562	NaN	0	514.3174438476562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QELIKIQR_	REV__CCDC88A|p.E735Sfs*10|1|0.33|ENSG00000115355|chr2:55334619-55334619|T/-|frameshift_variant;REV__CCDC88A|p.I779Sfs*4|1|0.29|ENSG00000115355|chr2:55334486-55334486|T/-|frameshift_variant;REV__CCDC88A|p.L1472Ffs*8|1|0.35|ENSG00000115355|chr2:55303124-55303125|-/A|frameshift_variant;REV__CCDC88A|p.N1003Kfs*3|1|0.32|ENSG00000115355|chr2:55322681-55322682|-/T|frameshift_variant;REV__CCDC88A|p.T678Hfs*8|1|0.16|ENSG00000115355|chr2:55334789-55334789|T/-|frameshift_variant;REV__ENSG00000115355|ENST00000436346|CCDC88A;REV__nc|ENSG00000115355|Q3V6T2-2|CCDC88A;REV__nc|ENSG00000115355|Q3V6T2-3|CCDC88A;REV__nc|ENSG00000115355|Q3V6T2-4|CCDC88A;REV__nc|ENSG00000115355|Q3V6T2-5|CCDC88A	42.396135135203025	1.7418937515398478	3				NaN	NaN	0	NaN	3177	3502	6677
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6694	22.636	NaN	1836.5	30	0	307.67	0.213	+			21706	KQIDVKNNLQ	10	52	600.3406528667667	1198.6667528003334	2	600.3408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KQIDVKNNLQ_	ENSG00000131115|ENST00000313040|ZNF227;nc|ENSG00000131115|Q86WZ6-2|ZNF227	49.536043120802724	0.461275219792494	3				NaN	NaN	0	NaN	3187	3505	6693
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6695	22.639	NaN	2169.3	30	0	303.66	0.037	+			15014	GTNFPNKIEK	10	54	574.3094589937266	1146.604365054253	2	574.3095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTNFPNKIEK_	ENSG00000027001|ENST00000382172|MIPEP;ENST00000494139.1_1_13:24416692-24444322:-|nuORF;MIPEP|p.Q439Sfs*19|1|0.32|ENSG00000027001|chr13:23839673-23839673|A/-|frameshift_variant	43.41853373365257	0.517645004642704	3				NaN	NaN	0	NaN	3188	3505	6693
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6708	22.666	NaN	1872.1	30	0	378.95	0.214				-1	MVDFRCTL	8	40	500.73333542594935	999.4521179186987	2	500.7327575683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))VDFRCTL_	ENSG00000158125|ENST00000379416|XDH;XDH|p.P555Qfs*67|1|0.27|ENSG00000158125|chr2:31373895-31373895|G/-|frameshift_variant;XDH|p.Q919Rfs*10|1|0.37|ENSG00000158125|chr2:31350104-31350104|C/-|frameshift_variant	19.996771675451527	0.7998311754834225	3				NaN	NaN	0	NaN	3198	3508	6707
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6709	22.67	NaN	2406.7	30	0	604.35	0.106	+			40586	SVAGDFVKK	9	48	475.7689188727259	949.5232848122519	2	475.7692565917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVAGDFVKK_	ENSG00000165238|ENST00000427277|WNK2;nc|ENSG00000165238|Q9Y3S1-2|WNK2;nc|ENSG00000165238|Q9Y3S1-4|WNK2;nc|ENSG00000165238|Q9Y3S1|WNK2;WNK2|p.T1980Lfs*12|2|0.16|ENSG00000165238|chr9:93297965-93297965|C/-|frameshift_variant	90.36981228632155	0.0638227155548745	3				NaN	NaN	0	NaN	3199	3508	6707
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6710	22.672	NaN	4150.8	30	0	1483.2	0.035				-1	MITMLVLGI	9	51	336.1940866929686	NaN	0	336.1941833496094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_MITM(Oxidation (M))LVLGI_	ENSG00000174502|ENST00000367135|SLC26A9;nc|ENSG00000174502|Q7LBE3-2|SLC26A9;SLC26A9|p.T608Pfs*62|1|0.36|ENSG00000174502|chr1:205921800-205921800|G/-|frameshift_variant	21.9598887501803	0.3626577482100488	3				NaN	NaN	0	NaN	3200	3508	6707
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6735	22.729	NaN	3586.4	30	0	461.31	0.143	+			5083	ATSLVFKQK	9	62	511.3058267940983	1020.5971006549967	2	511.30548095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSLVFKQK_	ENSG00000227345|ENST00000616448|PARG;PARG|p.D904Tfs*4|1|0.16|ENSG00000227345|chr10:49820231-49820231|C/-|frameshift_variant;PARG|p.N277Mfs*5|3|0.4|ENSG00000227345|chr10:49933618-49933618|T/-|frameshift_variant	75.04331003522576	0.118981335847003	3				NaN	NaN	0	NaN	3219	3514	6734
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6764	22.8	NaN	2764.5	30	0	1071.3	0.144			+	19719	KDTIRAVLGP	10	51	535.3220964845624	1068.6296400359247	2	535.322021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KDTIRAVLGP_	REV__ENSG00000129988|ENST00000217407|LBP	49.44154591367651	0.46214596422418036	3				NaN	NaN	0	NaN	3239	3523	6763
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6773	22.822	NaN	1877.2	30	0	440.47	0.214	+			14148	GSMSTVVSTK	10	48	498.755408329729	995.496263726258	2	498.75445556640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSMSTVVSTK_	ENSG00000164327|ENST00000357387|RICTOR;nc|ENSG00000164327|Q6R327-3|RICTOR;RICTOR|p.S1495Pfs*13|1|0.05|ENSG00000164327|chr5:38945642-38945643|-/ATTCTGGG|frameshift_variant	68.62578634547417	0.2885473079336931	3				NaN	NaN	0	NaN	3245	3526	6772
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6774	22.826	NaN	2468.4	30	0	294.81	0.106			+	21209	KLFEVMRP	8	53	510.2872659439529	1018.5599789547058	2	510.28662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KLFEVMRP_	REV__ENSG00000185467|ENST00000327442|KPNA7;REV__KPNA7|p.I322*|1|0.03|ENSG00000185467|chr7:99185098-99185099|AT/-|frameshift_variant	71.29570347882199	0.39610197767395533	3				NaN	NaN	0	NaN	3246	3526	6772
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6775	22.828	NaN	3461.8	30	0	1165.3	0.035	+			4673	ATLRVVLKA	9	48	324.21857603724453	969.6338987119336	3	324.2182922363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATLRVVLKA_	BICD1|p.A693V|1|0.12|ENSG00000151746|chr12:32328533-32328533|C/T|missense_variant	30.503639358989545	0.5181749237905803	3				NaN	NaN	0	NaN	3247	3526	6772
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6786	22.851	NaN	9525.2	30	0	1210.3	0.215			+	-1	HLVGPLTTQ	9	83	336.5224539847991	1006.5455325545972	3	336.52215576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))HLVGPLTTQ_	REV__ENST00000607802.1_1_20:61640736-61711710:+|nuORF	30.503639358989545	0.5181749237905803	3				NaN	NaN	0	NaN	3255	3529	6785
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6787	22.855	NaN	4101.5	30	0	524.34	0.106	+			39476	STFDTQITKK	10	74	584.8143877190885	1167.6142225049769	2	584.81396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STFDTQITKK_	ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC;PRKDC|p.D2437Wfs*3|1|0.11|ENSG00000253729|chr8:47840161-47840162|-/CA|frameshift_variant;PRKDC|p.K3681Nfs*6|1|0.32|ENSG00000253729|chr8:47785174-47785177|TTCT/-|frameshift_variant;PRKDC|p.M3670*|1|0.5|ENSG00000253729|chr8:47785212-47785212|T/-|frameshift_variant;PRKDC|p.M3846Cfs*12|1|0.13|ENSG00000253729|chr8:47779047-47779047|T/-|frameshift_variant;PRKDC|p.M4020Cfs*2|1|0.31|ENSG00000253729|chr8:47776968-47776968|T/-|frameshift_variant;PRKDC|p.N3605Kfs*3|1|0.22|ENSG00000253729|chr8:47788993-47788994|-/T|frameshift_variant;PRKDC|p.N4037Ifs*15|1|0.17|ENSG00000253729|chr8:47776916-47776916|T/-|frameshift_variant;PRKDC|p.R2704Gfs*13|2|0.34|ENSG00000253729|chr8:47834238-47834238|T/-|frameshift_variant;PRKDC|p.S3402Ifs*16|1|0.04|ENSG00000253729|chr8:47799302-47799303|-/AAACCGTGAGTTAGAGGAGGTAA|frameshift_variant;PRKDC|p.S4099Qfs*6|1|0.25|ENSG00000253729|chr8:47774265-47774265|A/-|frameshift_variant;PRKDC|p.T3268Pfs*7|1|0.5|ENSG00000253729|chr8:47803426-47803426|T/-|frameshift_variant;PRKDC|p.W3401Cfs*4|1|0.01|ENSG00000253729|chr8:47799304-47799305|-/AATGAATA|frameshift_variant	93.44185321454538	0.11136857881027329	3				NaN	NaN	0	NaN	3256	3529	6785
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6788	22.857	NaN	1980.8	30	0	221.02	0.036	+			20309	KEQDVEKEL	9	52	559.2905014502238	1116.5664499672475	2	559.2906494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEQDVEKEL_	ENSG00000082641|ENST00000362042|NFE2L1;nc|ENSG00000082641|Q14494-2|NFE2L1;NFE2L1|p.G370Afs*44|4|0.27|ENSG00000082641|chr17:48058426-48058426|G/-|frameshift_variant	78.26377905018397	0.10505600812668463	3				NaN	NaN	0	NaN	3257	3529	6785
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6799	22.882	NaN	1400	30	0	166.53	0.214				-1	HFIRNSCL	8	44	344.50811767578125	NaN	0	344.50811767578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))HFIRNSCL_	ENST00000416322.5_1_7:90014358-90014463:+|nuORF	21.70233525837049	1.7418937515398478	3				NaN	NaN	0	NaN	3265	3532	6798
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6800	22.886	NaN	1130.2	30	0	195.84	0.035			+	51370	YTIEYTKN	8	37	516.2577857160176	NaN	0	516.2582397460938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YTIEYTKN_	REV__tr|U7SUD1|U7SUD1_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01109PE=4SV=1	20.481830146152948	1.741893751539848	3				NaN	NaN	0	NaN	3266	3532	6798
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6826	22.944	NaN	7553.9	30	0	1251.1	0.214	+			1389	AEVLNKHSL	9	66	505.78549347083606	1009.5564340084721	2	505.78509521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEVLNKHSL_	ENSG00000099783|ENST00000325495|HNRNPM;ENST00000597813.5_1_19:8528492-8528615:+|nuORF;HNRNPM|p.M346Wfs*22|1|0.25|ENSG00000099783|chr19:8473699-8473699|A/-|frameshift_variant;nc|ENSG00000099783|P52272-2|HNRNPM	98.62937762414208	0.04060045538121712	3				NaN	NaN	0	NaN	3286	3538	6825
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6827	22.948	NaN	1529.3	30	0	313.51	0.106	+			36364	SETAVAKNQAL	11	39	566.303557408714	NaN	0	566.3038940429688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SETAVAKNQAL_	ENSG00000131473|ENST00000352035|ACLY;nc|ENSG00000131473|P53396-2|ACLY;nc|ENSG00000131473|P53396-3|ACLY	40.05817265558897	0.3867246477658885	3				NaN	NaN	0	NaN	3287	3538	6825
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6828	22.95	NaN	1231.5	30	0	228.01	0.038	+			46323	VEKKGEKLIL	10	42	386.2483864944804	1155.7233300836413	3	386.58258056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VEKKGEKLIL_	ENSG00000130638|ENST00000252934|ATXN10;nc|ENSG00000130638|Q9UBB4-2|ATXN10	20.94693142431847	0.7087701759873708	3				NaN	NaN	0	NaN	3288	3538	6825
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6839	22.975	NaN	2299.5	30	0	370.31	0.214	+			35208	SAKKVYGAAI	10	52	336.53411277856213	NaN	0	336.5341491699219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAKKVYGAAI_	DENND4C|p.F1650Yfs*12|1|0.38|ENSG00000137145|chr9:19358095-19358096|TT/-|frameshift_variant;DENND4C|p.R1677Dfs*12|1|0.24|ENSG00000137145|chr9:19360255-19360255|A/-|frameshift_variant;ENSG00000137145|ENST00000434457|DENND4C;ENST00000380437.8_1_9:19290781-19335045:+|nuORF;nc|ENSG00000137145|Q5VZ89-3|DENND4C;nc|ENSG00000137145|Q5VZ89-5|DENND4C;nc|ENSG00000137145|Q5VZ89|DENND4C	24.20275056022122	0.4201028297492154	3				NaN	NaN	0	NaN	3296	3541	6838
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6840	22.979	NaN	1044.2	30	0	113.09	0.035				-1	CDSSMDVAQ	9	38	514.6850988853585	NaN	0	514.6847534179688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_C(Carbamidomethyl (C))DSSM(Oxidation (M))DVAQ_	ENSG00000145934|ENST00000518659|TENM2;nc|ENSG00000145934|Q9NT68-2|TENM2;TENM2|p.L1667Hfs*17|1|0.05|ENSG00000145934|chr5:168218890-168218891|-/ATCAGCGT|frameshift_variant;TENM2|p.N1524Tfs*20|1|0.1|ENSG00000145934|chr5:168218458-168218458|A/-|frameshift_variant	20.94693142431847	0.3660861156085067	3				NaN	NaN	0	NaN	3297	3541	6838
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6852	23.004	NaN	2162.5	30	0	277.67	0.214			+	13043	GEVVTGHLKE	10	53	534.7878439721798	1067.5611350111594	2	534.787841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEVVTGHLKE_	REV__ENSG00000078328|ENST00000550418|RBFOX1;REV__ENSG00000100320|ENST00000695854|RBFOX2;REV__nc|ENSG00000078328|Q9NWB1-2|RBFOX1;REV__nc|ENSG00000078328|Q9NWB1-3|RBFOX1;REV__nc|ENSG00000078328|Q9NWB1-4|RBFOX1;REV__nc|ENSG00000078328|Q9NWB1-5|RBFOX1;REV__nc|ENSG00000100320|O43251-10|RBFOX2;REV__nc|ENSG00000100320|O43251-2|RBFOX2;REV__nc|ENSG00000100320|O43251-3|RBFOX2;REV__nc|ENSG00000100320|O43251-4|RBFOX2;REV__nc|ENSG00000100320|O43251-5|RBFOX2;REV__nc|ENSG00000100320|O43251-6|RBFOX2;REV__nc|ENSG00000100320|O43251-7|RBFOX2;REV__nc|ENSG00000100320|O43251-8|RBFOX2;REV__nc|ENSG00000100320|O43251-9|RBFOX2;REV__nc|ENSG00000100320|O43251|RBFOX2;REV__RBFOX1|p.T351Pfs*7|1|0.34|ENSG00000078328|chr16:7709106-7709106|C/-|frameshift_variant	39.252832667884924	0.5560298534376815	3				NaN	NaN	0	NaN	3306	3544	6851
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6853	23.008	NaN	1819.1	30	0	470.34	0.036				-1	NMNRLPGWD	9	33	559.7580294282953	NaN	0	559.758056640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_NM(Oxidation (M))NRLPGWD_	ENSG00000010017|ENST00000011619|RANBP9;ENSG00000141084|ENST00000317506|RANBP10;ENST00000602525.5_1_16:67765330-67840439:-|nuORF;nc|ENSG00000010017|Q96S59-3|RANBP9;nc|ENSG00000141084|Q6VN20-2|RANBP10	23.04248740728303	0.3589936788096251	3				NaN	NaN	0	NaN	3307	3544	6851
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6864	23.033	NaN	4869.4	30	0	800.34	0.214	+			4504	ATITKVLQK	9	69	501.3216483488615	1000.628743764523	2	501.3212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATITKVLQK_	ENSG00000130589|ENST00000467148|HELZ2;HELZ2|p.D1312G|1|0.12|ENSG00000130589|chr20:63564887-63564887|T/C|missense_variant;HELZ2|p.G2213Vfs*22|1|0.14|ENSG00000130589|chr20:63561876-63561876|C/-|frameshift_variant;HELZ2|p.R2206Vfs*29|2|0.28|ENSG00000130589|chr20:63561898-63561898|G/-|frameshift_variant;nc|ENSG00000130589|Q9BYK8-2|HELZ2;nc|ENSG00000130589|Q9BYK8|HELZ2	154.1183686248401	0.005909203230691971	3				NaN	NaN	0	NaN	3315	3547	6863
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6865	23.037	NaN	2389.3	30	0	795.16	0.106	+			35371	SAPSAPAA	8	43	336.1710572033816	NaN	0	336.17108154296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAPSAPAA_	ENSG00000122254|ENST00000261374|HS3ST2;REV__ENST00000397117.5_1_3:10362467-10362641:-|nuORF	28.2542754592877	1.7418937515398478	3				NaN	NaN	0	NaN	3316	3547	6863
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6866	23.039	NaN	3987.1	30	0	513.97	0.106	+			17650	IEKFDKSKL	9	60	554.3246138931908	1106.6346748531814	2	554.3248291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IEKFDKSKL_	ENSG00000154620|ENST00000284856|TMSB4Y;ENSG00000205542|ENST00000451311|TMSB4X;ENST00000323496.5_1_9:131104444-131104642:+|nuORF;TMSB4X|p.A8V|1|0.09|ENSG00000205542|chrX:12976284-12976284|C/T|missense_variant	88.1336951990783	0.07012705547711102	3				NaN	NaN	0	NaN	3317	3547	6863
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6867	23.041	NaN	1826.6	30	0	238.59	0.106				-1	WMLYCTKK	8	41	544.7655429739397	1087.5165330146792	2	544.76513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_WM(Oxidation (M))LYCTKK_	ENSG00000144426|ENST00000683969|NBEAL1;ENST00000460416.2_1_2:203881095-203914720:+|nuORF;ENST00000478884.5_1_2:203881095-203927086:+|nuORF;NBEAL1|p.A1274Qfs*17|1|0.1|ENSG00000144426|chr2:203135766-203135766|A/-|frameshift_variant;NBEAL1|p.D19Y|1|0.29|ENSG00000144426|chr2:203041768-203041768|G/T|missense_variant;NBEAL1|p.D657Vfs*8|1|0.05|ENSG00000144426|chr2:203110256-203110257|-/TAAAAAA|frameshift_variant;NBEAL1|p.F1670Lfs*25|1|0.21|ENSG00000144426|chr2:203144843-203144843|T/-|frameshift_variant;NBEAL1|p.F2315Lfs*2|1|0.17|ENSG00000144426|chr2:203193900-203193900|T/-|frameshift_variant;NBEAL1|p.K2562Rfs*15|1|0.41|ENSG00000144426|chr2:203209306-203209306|A/-|frameshift_variant;NBEAL1|p.N2072Kfs*10|1|0.35|ENSG00000144426|chr2:203172825-203172826|-/A|frameshift_variant;NBEAL1|p.R472Sfs*8|1|0.06|ENSG00000144426|chr2:203107741-203107742|-/CAACATA|frameshift_variant;NBEAL1|p.S520Efs*20|1|0.39|ENSG00000144426|chr2:203107879-203107880|-/G|frameshift_variant;NBEAL1|p.T1311Nfs*3|1|0.08|ENSG00000144426|chr2:203135875-203135876|-/A|frameshift_variant;nc|ENSG00000144426|Q6ZS30-1|NBEAL1;nc|ENSG00000144426|Q6ZS30|NBEAL1	55.50420428727701	0.5462892107279674	3				NaN	NaN	0	NaN	3318	3547	6863
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6868	23.042	NaN	2020	30	0	261.46	0.106	+			2176	ALMGYATHK	9	55	496.2559755423776	990.4973981515552	2	496.25543212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ALMGYATHK_	ENSG00000126709|ENST00000361157|IFI6;nc|ENSG00000126709|P09912-2|IFI6;nc|ENSG00000126709|P09912-3|IFI6	84.9155231211612	0.07920012719736333	3				NaN	NaN	0	NaN	3319	3547	6863
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6869	23.044	NaN	2839	30	0	501.62	0.037	+			43212	TEVKKIYKL	9	58	561.3505638116858	1120.6865746901715	2	561.3514404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TEVKKIYKL_	ENSG00000144034|ENST00000272424|TPRKB;nc|ENSG00000144034|Q9Y3C4-2|TPRKB;nc|ENSG00000144034|Q9Y3C4-3|TPRKB	90.60085204095205	0.06317133949006545	3				NaN	NaN	0	NaN	3320	3547	6863
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6892	23.097	NaN	1553.7	30	0	191.58	0.142	+			12231	GASEILLKK	9	50	479.8001068157143	957.5856606982286	2	479.7998962402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GASEILLKK_	ENSG00000067842|ENST00000263519|ATP2B3;nc|ENSG00000067842|Q16720-2|ATP2B3;nc|ENSG00000067842|Q16720-3|ATP2B3;nc|ENSG00000067842|Q16720-4|ATP2B3;nc|ENSG00000067842|Q16720-5|ATP2B3;nc|ENSG00000067842|Q16720-6|ATP2B3;nc|ENSG00000067842|Q16720-7|ATP2B3;nc|ENSG00000067842|Q16720-8|ATP2B3	77.31757898189308	0.1091473830098891	3				NaN	NaN	0	NaN	3337	3553	6891
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6904	23.124	NaN	1702.1	30	0	233.76	0.214	+			44862	TTVDIFHKK	9	48	544.8088075063041	1087.6030620794081	2	544.8080444335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTVDIFHKK_	ENSG00000158411|ENST00000289359|MITD1	54.722347961057174	0.257609425301511	3				NaN	NaN	0	NaN	3346	3556	6903
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6905	23.128	NaN	1695.1	30	0	340.12	0.037			+	47305	VNRKIGESYL	10	28	589.8305914264743	1177.6466299197484	2	589.8304443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VNRKIGESYL_	REV__tr|U7T2S3|U7T2S3_FUSNUUncharacterizedAAAdomain-containingproteinycf46OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00396PE=3SV=1	19.996771675451527	0.7148376616046445	3				NaN	NaN	0	NaN	3347	3556	6903
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6917	23.153	NaN	1225.3	30	0	145.69	0.214			+	21622	KPQQYSKPL	9	44	363.5420380524535	NaN	0	363.54205322265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KPQQYSKPL_	REV__ENSG00000169375|ENST00000394947|SIN3A;REV__SIN3A|p.G659Afs*26|1|0.14|ENSG00000169375|chr15:75396375-75396375|C/-|frameshift_variant	23.52269567125451	0.3573684076213556	3				NaN	NaN	0	NaN	3356	3559	6916
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6918	23.157	NaN	971.63	30	0	220.83	0.036	+			20701	KGQHARQRP	9	35	539.3037109375	NaN	0	539.3037109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KGQHARQRP_	ENST00000595633.5_1_19:49949641-49950433:-|nuORF	13.45404412870281	0.3914458912562635	3				NaN	NaN	0	NaN	3357	3559	6916
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6946	23.218	NaN	12176	30	0	6142.4	0.214				-1	 	0	55	384.77234296940424	767.5301330056085	2	384.77197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3379	3565	6945
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6947	23.222	NaN	5521.6	30	0	937.41	0.106	+			15166	GTSGLILKR	9	58	472.7980424146102	943.5815318960205	2	472.7976989746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTSGLILKR_	ENSG00000137825|ENST00000260386|ITPKA;ITPKA|p.K290Vfs*10|1|0.3|ENSG00000137825|chr15:41502054-41502055|-/ATGT|frameshift_variant;ITPKA|p.S212L|1|0.18|ENSG00000137825|chr15:41501683-41501683|C/T|missense_variant	56.43379154798735	0.2433427591689151	3				NaN	NaN	0	NaN	3380	3565	6945
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6948	23.224	NaN	1412.2	30	0	264.31	0.106			+	-1	MIWPAMRFG	9	24	562.7716605404362	1123.5287681476723	2	562.771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))IWPAMRFG_	REV__ENSG00000142623|ENST00000375471|PADI1	12.959181472943097	0.6112419832031292	3				NaN	NaN	0	NaN	3381	3565	6945
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6949	23.226	NaN	808.74	30	0	277.23	0.038	+			26287	LSTSTALGYLH	11	26	388.2084803570334	1161.6036116713003	3	388.2084045410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSTSTALGYLH_	ENST00000357115.7_2_4:151935799-151936641:-|nuORF	30.568863376406313	0.6691487505135859	3				NaN	NaN	0	NaN	3382	3565	6945
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6961	23.251	NaN	5416.1	30	0	1084.2	0.144	+			36977	SIMSSHVMK	9	60	510.25407191146695	1018.4935908897339	2	510.2539367675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIMSSHVMK_	ENSG00000159140|ENST00000356577|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-4|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-6|SON;nc|ENSG00000159140|P18583-7|SON;nc|ENSG00000159140|P18583-9|SON	93.5975768576971	0.05472259948179787	3				NaN	NaN	0	NaN	3391	3568	6960
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6975	23.282	NaN	2423	30	0	309.27	0.145	+			50944	YHVAEQLKVSQ	11	51	651.3451109324161	NaN	0	651.3446044921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YHVAEQLKVSQ_	ENSG00000162104|ENST00000294016|ADCY9	24.519189625965996	0.45614437233802635	3				NaN	NaN	0	NaN	3402	3571	6974
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6986	23.309	NaN	2610.6	30	0	422.92	0.213	+			19555	KCLAAHYQKR	10	64	609.3329153035327	1216.6512776738653	2	609.3338012695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KCLAAHYQKR_	ZNF462|p.G1711C|1|0.35|ENSG00000148143|chr9:106929043-106929043|G/T|missense_variant	54.776311868738084	0.41334902933431344	3				NaN	NaN	0	NaN	3410	3574	6985
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6987	23.312	NaN	1521.1	30	0	339.48	0.106			+	-1	MSLSNRGQY	9	34	536.2502182422609	NaN	0	536.2503051757812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_M(Oxidation (M))SLSNRGQY_	REV__ENST00000493032.5_1_1:46714192-46726402:+|nuORF	34.172542307311794	0.30503706118289736	3				NaN	NaN	0	NaN	3411	3574	6985
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	6988	23.314	NaN	1307.4	30	0	213.57	0.036			+	43058	TELKKVIET	9	42	530.8155622132492	NaN	0	530.816162109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TELKKVIET_	REV__ENSG00000115816|ENST00000234170|CEBPZ	58.22992032128504	0.15686832049467786	3				NaN	NaN	0	NaN	3412	3574	6985
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7014	23.373	NaN	1458.3	30	0	322.65	0.214	+			34566	RVLQPYNK	8	35	509.2958643111923	1016.5771756891846	2	509.2959289550781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVLQPYNK_	ENSG00000153993|ENST00000284136|SEMA3D;SEMA3D|p.I482*|2|0.07|ENSG00000153993|chr7:85020292-85020293|-/TA|frameshift_variant;SEMA3D|p.S481Rfs*88|1|0.11|ENSG00000153993|chr7:85020293-85020294|-/CTTT|frameshift_variant	44.116797842482775	0.6307669463330267	3				NaN	NaN	0	NaN	3432	3580	7013
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7015	23.376	NaN	1375.4	30	0	148.41	0.035	+			29901	PLPKLTPQN	9	49	336.5341998610725	NaN	0	336.5340881347656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PLPKLTPQN_	ENSG00000188895|ENST00000398532|MSL1;ENST00000339569.9_1_17:38287776-38290619:+|nuORF;nc|ENSG00000188895|Q68DK7-2|MSL1;nc|ENSG00000188895|Q68DK7-3|MSL1	24.20275056022122	0.35506675290109213	3				NaN	NaN	0	NaN	3433	3580	7013
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7025	23.4	NaN	804.25	30	0	139.66	0.144			+	25467	LPQWPCPLN	9	26	534.2715837343294	NaN	0	534.2718505859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LPQWPCPLN_	REV__ENST00000420967.5_1_12:118454632-118456902:+|nuORF	25.450171626174864	0.34907449758287085	3				NaN	NaN	0	NaN	3440	3583	7024
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7039	23.43	NaN	2321.8	30	0	450.83	0.144	+			44642	TTFTKIVNK	9	51	526.3110801816129	1050.6076074300256	2	526.3109741210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTFTKIVNK_	ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1670Tfs*23|1|0.29|ENSG00000174231|chr17:1659487-1659487|C/-|frameshift_variant	53.08895987439943	0.27122541748218487	3				NaN	NaN	0	NaN	3451	3586	7038
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7052	23.459	NaN	9468.8	30	0	623.98	0.211				-1	WSWCRWWWTE	10	86	791.8390616633421	1581.6635703934842	2	791.8402709960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_WSWC(Carbamidomethyl (C))RWWWTE_	ENST00000348956.6_1_14:103986274-103986647:-|nuORF	31.529811441608018	0.6223461015008678	3				NaN	NaN	0	NaN	3461	3589	7051
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7053	23.463	NaN	2250.6	30	0	327.61	0.034	+			38059	SPRSPDTTL	9	41	487.25134752370786	972.4881421142157	2	487.2508544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SPRSPDTTL_	ENSG00000205277|ENST00000536621|MUC12;ENSG00000205277|ENST00000536621|MUC12;ENSG00000205277|ENST00000536621|MUC12;nc|ENSG00000205277|Q9UKN1|MUC12;nc|ENSG00000205277|Q9UKN1|MUC12;nc|ENSG00000205277|Q9UKN1|MUC12	34.172542307311794	0.4838870758800184	3				NaN	NaN	0	NaN	3462	3589	7051
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7067	23.492	NaN	3097.3	30	0	331.63	0.144	+			15815	GVYGDVQRVK	10	61	560.8094778618452	1119.6044027904902	2	560.80908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVYGDVQRVK_	ENSG00000011304|ENST00000356948|PTBP1;ENSG00000117569|ENST00000674951|PTBP2;ENST00000586944.5_1_19:807712-810823:+|nuORF;nc|ENSG00000011304|P26599-1|PTBP1;nc|ENSG00000011304|P26599-2|PTBP1;nc|ENSG00000117569|Q9UKA9-2|PTBP2;nc|ENSG00000117569|Q9UKA9-3|PTBP2;nc|ENSG00000117569|Q9UKA9-4|PTBP2;PTBP2|p.N446Ifs*21|1|0.27|ENSG00000117569|chr1:96812873-96812873|A/-|frameshift_variant;PTBP2|p.P452Sfs*10|1|0.17|ENSG00000117569|chr1:96812888-96812889|-/T|frameshift_variant	78.26377905018397	0.20980573808910843	3				NaN	NaN	0	NaN	3473	3592	7066
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7080	23.521	NaN	4773.3	30	0	2138.3	0.144	+			40108	STPDAVMGNPK	11	50	558.771975228934	1115.529397524668	2	558.7718505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STPDAVMGNPK_	ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF	76.16968421966216	0.18430501143391895	3				NaN	NaN	0	NaN	3483	3595	7079
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7091	23.548	NaN	1765.4	30	0	228.29	0.144	+			51276	YRSELIIH	8	44	344.1945423475525	1029.5617976428575	3	344.19415283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YRSELIIH_	ENSG00000196967|ENST00000292841|ZNF585A;ENSG00000245680|ENST00000532828|ZNF585B;ZNF585A|p.H600Gfs*9|1|0.05|ENSG00000196967|chr19:37152101-37152102|-/CACC|frameshift_variant	14.664097394203935	0.7913966407026132	3				NaN	NaN	0	NaN	3491	3598	7090
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7101	23.572	NaN	1830.2	30	0	567.79	0.214				-1	 	0	37	384.77234296940424	767.5301330056085	2	384.7717590332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3498	3601	7100
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7102	23.575	NaN	3551.5	30	0	678.89	0.106	+			28937	NRNSSPVHFAF	11	57	638.3139394063859	1274.6133258795717	2	638.314697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NRNSSPVHFAF_	ENST00000444100.2_1_2:61245417-61245543:+|nuORF	27.882242232435846	0.6973292152807183	3				NaN	NaN	0	NaN	3499	3601	7100
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7103	23.577	NaN	3562.2	30	0	505.02	0.035	+			3919	ATASLGVIHK	10	68	498.79602522441934	995.5774975156387	2	498.7951965332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATASLGVIHK_	ENSG00000173692|ENST00000308696|PSMD1;nc|ENSG00000173692|Q99460-2|PSMD1;PSMD1-NHEJ1|1|fusion;PSMD1|p.K849Rfs*44|1|0.38|ENSG00000173692|chr2:231165258-231165258|A/-|frameshift_variant;PSMD1|p.L603Afs*7|1|0.19|ENSG00000173692|chr2:231085100-231085101|-/T|frameshift_variant	95.81516180277367	0.09778090853194907	3				NaN	NaN	0	NaN	3500	3601	7100
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7112	23.597	NaN	4260.1	30	0	507.09	0.146	+			33493	RKETRFEEGEQ	11	68	704.8435938449865	1407.6726347567728	2	704.8439331054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RKETRFEEGEQ_	ENSG00000183873|ENST00000423572|SCN5A;nc|ENSG00000183873|Q14524-3|SCN5A;nc|ENSG00000183873|Q14524-4|SCN5A;nc|ENSG00000183873|Q14524-5|SCN5A;nc|ENSG00000183873|Q14524-6|SCN5A;nc|ENSG00000183873|Q14524|SCN5A	20.83715455343099	0.7712264395190968	3				NaN	NaN	0	NaN	3506	3604	7111
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7120	23.617	NaN	1813.1	30	0	342.26	0.215	+			15181	GTSITVPQK	9	45	465.76652893093063	929.5185049286613	2	465.7666320800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTSITVPQK_	ENSG00000134851|ENST00000381334|TMEM165;ENST00000508404.5_1_4:56269487-56291616:+|nuORF;nc|ENSG00000134851|Q9HC07-2|TMEM165;TMEM165|p.L309Wfs*10|1|0.25|ENSG00000134851|chr4:55425397-55425397|T/-|frameshift_variant	60.11826168202944	0.21262886028301267	3				NaN	NaN	0	NaN	3511	3607	7119
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7121	23.621	NaN	1279.6	30	0	266.96	0.036	+			41267	SVLKENSLPK	10	31	557.8273939301306	1113.640234927061	2	557.8279418945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVLKENSLPK_	ENSG00000112320|ENST00000317357|SOBP;ENST00000477448.1_1_6:107811820-107879187:+|nuORF;SOBP|p.P463Rfs*31|1|0.33|ENSG00000112320|chr6:107634227-107634227|C/-|frameshift_variant	14.693671053092006	0.741784362295702	3				NaN	NaN	0	NaN	3512	3607	7119
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7132	23.646	NaN	1808.4	30	0	326.38	0.144	+			40255	STSKIVSSFK	10	54	542.3060525619699	1082.5975521907396	2	542.306396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STSKIVSSFK_	ENSG00000047056|ENST00000263150|WDR37;nc|ENSG00000047056|Q9Y2I8-2|WDR37;nc|ENSG00000047056|Q9Y2I8-3|WDR37	61.76455937419982	0.3497917639301274	3				NaN	NaN	0	NaN	3520	3610	7131
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7144	23.673	NaN	1830	30	0	418.91	0.214			+	44112	TPWVGDLTV	9	51	494.2606701304439	NaN	0	494.2618408203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TPWVGDLTV_	REV__ENSG00000110713|ENST00000324932|NUP98;REV__nc|ENSG00000110713|P52948-2|NUP98;REV__nc|ENSG00000110713|P52948-3|NUP98;REV__nc|ENSG00000110713|P52948-4|NUP98;REV__nc|ENSG00000110713|P52948-6|NUP98;REV__nc|ENSG00000110713|P52948|NUP98;REV__NUP98|p.N1328Tfs*89|2|0.22|ENSG00000110713|chr11:3699159-3699159|T/-|frameshift_variant	35.61828744233558	0.29773779453147337	3				NaN	NaN	0	NaN	3529	3613	7143
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7145	23.677	NaN	1758.3	30	0	241.7	0.106	+			1015	AEKLGETEKL	10	49	559.3106366292951	1116.6067203253901	2	559.3099975585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEKLGETEKL_	ENSG00000182481|ENST00000330459|KPNA2;ENST00000578492.5_1_17:62746826-62750158:-|nuORF	82.7504851949679	0.1731497355276012	3				NaN	NaN	0	NaN	3530	3613	7143
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7146	23.679	NaN	2184.8	30	0	433.88	0.034	+			26375	LTDKHSDK	8	43	472.2459725085551	942.4773920839102	2	472.24554443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LTDKHSDK_	ENSG00000196914|ENST00000397843|ARHGEF12;nc|ENSG00000196914|Q9NZN5-2|ARHGEF12	63.30626980617807	0.4690498839812213	3				NaN	NaN	0	NaN	3531	3613	7143
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7159	23.706	NaN	2987.4	30	0	987	0.214				-1	 	0	54	362.7593448706598	723.5041368081196	2	362.7589111328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3541	3616	7158
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7160	23.71	NaN	1346.9	30	0	279.69	0.106	+			28154	NALNHTEQY	9	44	545.2526310649503	NaN	0	545.2525024414062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NALNHTEQY_	ENSG00000146281|ENST00000275072|PM20D2	36.446750945000026	0.29355505452396785	3				NaN	NaN	0	NaN	3542	3616	7158
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7161	23.712	NaN	1386.7	30	0	376.4	0.035	+			33652	RMVKKMKK	8	46	524.8295308447692	NaN	0	524.8295288085938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RMVKKMKK_	ENSG00000196182|ENST00000373132|STK40;nc|ENSG00000196182|Q8N2I9-3|STK40;nc|ENSG00000196182|Q8N2I9-4|STK40	33.51558372728122	1.7418937515398478	3				NaN	NaN	0	NaN	3543	3616	7158
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7174	23.74	NaN	2232.3	30	0	423.82	0.214	+			15399	GTYGLDSVKK	10	49	534.2904052734375	NaN	0	534.2904052734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTYGLDSVKK_	ENSG00000087338|ENST00000282570|GMCL1	46.45678178249821	0.32800322091223805	3				NaN	NaN	0	NaN	3553	3619	7173
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7175	23.743	NaN	1440.6	30	0	167.2	0.106	+			18693	ITDEFVKQK	9	48	554.3066175511577	NaN	0	554.3068237304688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ITDEFVKQK_	ENSG00000067445|ENST00000173898|TRO;ENSG00000102316|ENST00000375068|MAGED2;ENST00000475183.1_1_X:54953428-54957230:+|nuORF;ENST00000492706.5_1_X:54953428-54957450:+|nuORF;nc|ENSG00000067445|Q12816-2|TRO;nc|ENSG00000067445|Q12816-3|TRO;nc|ENSG00000067445|Q12816-4|TRO;nc|ENSG00000067445|Q12816-5|TRO;nc|ENSG00000102316|Q9UNF1-2|MAGED2;TRO|p.S1034Rfs*10|1|0.07|ENSG00000067445|chrX:54929826-54929826|C/-|frameshift_variant	79.71258880314673	0.07236858429579222	3				NaN	NaN	0	NaN	3554	3619	7173
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7176	23.745	NaN	865.02	30	0	76.065	0.106			+	9599	ELLIILMY	8	50	336.5341998610725	NaN	0	336.53466796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ELLIILMY_	REV__ENST00000599328.1_1_19:53744649-53744913:-|nuORF	29.841539824830324	1.7418937515398478	3				NaN	NaN	0	NaN	3555	3619	7173
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7177	23.747	NaN	873.92	30	0	152.78	0.038			+	51567	YYIGTSIDAPL	11	32	404.8766787109944	NaN	0	404.87664794921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YYIGTSIDAPL_	REV__ENSG00000135002|ENST00000376736|RFK;REV__ENST00000483155.5_1_9:79002317-79008728:-|nuORF	15.333111300571575	0.456735970842152	3				NaN	NaN	0	NaN	3556	3619	7173
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7202	23.803	NaN	4878.8	30	0	550.3	0.211	+			31895	QQESLNIWKSK	11	78	680.864073246167	1359.7135935591339	2	680.864990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QQESLNIWKSK_	ENST00000438469.2_1_1:146553889-146554591:-|nuORF	46.45678178249821	0.46959456050452836	3				NaN	NaN	0	NaN	3575	3625	7201
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7203	23.807	NaN	2414.9	30	0	385.18	0.037	+			43960	TPEEKIREY	9	50	582.7986775736024	1163.5828022140047	2	582.7982177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TPEEKIREY_	ENSG00000138668|ENST00000313899|HNRNPD;ENST00000514325.1_1_4:83279715-83279970:-|nuORF;nc|ENSG00000138668|Q14103-2|HNRNPD;nc|ENSG00000138668|Q14103-3|HNRNPD;nc|ENSG00000138668|Q14103-4|HNRNPD	45.02220120713402	0.3613509778819777	3				NaN	NaN	0	NaN	3576	3625	7201
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7225	23.859	NaN	1789.4	30	0	196.87	0.145	+			37592	SLPGGHGDHVF	11	47	561.7678032532139	NaN	0	561.7673950195312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLPGGHGDHVF_	ENST00000337318.7_2_10:126309750-126310008:-|nuORF	25.57405402267927	0.45144328854727944	3				NaN	NaN	0	NaN	3592	3631	7224
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7246	23.911	NaN	2070.7	30	0	312.9	0.145	+			15846	GWRHGQRGHGQ	11	40	638.3139394063859	1274.6133258795717	2	638.3143310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GWRHGQRGHGQ_	ENST00000524877.5_1_11:61722897-61725974:+|nuORF;ENST00000529265.5_1_11:61717864-61725974:+|nuORF	14.137123925751023	0.8042936413770803	3				NaN	NaN	0	NaN	3607	3637	7245
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7259	23.94	NaN	907.35	30	0	373.4	0.214			+	-1	IGRSVCVPL	9	37	334.19123796402226	NaN	0	334.19134521484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_IGRSVC(Carbamidomethyl (C))VPL_	REV__ENST00000305709.5_1_9:66554450-66554720:+|nuORF	27.882242232435846	0.3367954786602879	3				NaN	NaN	0	NaN	3617	3640	7258
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7260	23.943	NaN	1548.4	30	0	258.54	0.106	+			34070	RSPLCQALI	9	47	500.7838265964527	999.5531002597054	2	500.78277587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RSPLCQALI_	ENST00000495593.1_1_1:18021396-18023872:+|nuORF	56.43379154798735	0.2433427591689151	3				NaN	NaN	0	NaN	3618	3640	7258
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7261	23.945	NaN	995.36	30	0	134.54	0.034			+	18264	IPELVTER	8	26	478.77399733877263	955.5334417443453	2	478.7743835449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IPELVTER_	REV__CCDC168|p.A3265Vfs*21|1|0.06|ENSG00000175820|chr13:102740903-102740904|-/GAAGAAAAATATA|frameshift_variant;REV__CCDC168|p.A4132Qfs*29|1|0.23|ENSG00000175820|chr13:102738304-102738304|T/-|frameshift_variant;REV__CCDC168|p.F3005Lfs*18|2|0.31|ENSG00000175820|chr13:102741682-102741682|A/-|frameshift_variant;REV__CCDC168|p.G4714Rfs*2|1|0.22|ENSG00000175820|chr13:102736557-102736558|-/T|frameshift_variant;REV__CCDC168|p.G6141Lfs*25|1|0.03|ENSG00000175820|chr13:102732276-102732277|-/AGGAAAAATCACCAAACACTAG|frameshift_variant;REV__CCDC168|p.K5937Nfs*10|1|0.37|ENSG00000175820|chr13:102732886-102732886|T/-|frameshift_variant;REV__CCDC168|p.K6236Nfs*3|1|0.42|ENSG00000175820|chr13:102731989-102731989|T/-|frameshift_variant;REV__CCDC168|p.L3176Ifs*8|1|0.42|ENSG00000175820|chr13:102741171-102741172|-/T|frameshift_variant;REV__CCDC168|p.L5048Ifs*6|1|0.12|ENSG00000175820|chr13:102735555-102735556|-/T|frameshift_variant;REV__CCDC168|p.L5234*|1|0.12|ENSG00000175820|chr13:102735001-102735001|A/-|frameshift_variant;REV__CCDC168|p.M5025Cfs*8|1|0.29|ENSG00000175820|chr13:102735624-102735624|T/-|frameshift_variant;REV__CCDC168|p.N2119Kfs*18|1|0.41|ENSG00000175820|chr13:102744340-102744341|-/T|frameshift_variant;REV__CCDC168|p.T2792Dfs*27|1|0.25|ENSG00000175820|chr13:102742324-102742325|-/T|frameshift_variant;REV__CCDC168|p.T4543Lfs*5|1|0.1|ENSG00000175820|chr13:102737070-102737070|T/-|frameshift_variant;REV__ENSG00000175820|ENST00000322527|CCDC168	40.5726180659479	0.6527593143185008	3				NaN	NaN	0	NaN	3619	3640	7258
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7270	23.965	NaN	3478.8	30	0	1080.6	0.214	+			15070	GTPLETIQKK	10	49	557.8273939301306	1113.640234927061	2	557.8269653320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTPLETIQKK_	ENSG00000119013|ENST00000237889|NDUFB3	52.167168403610894	0.437078873413402	3				NaN	NaN	0	NaN	3625	3643	7269
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7271	23.969	NaN	3155.1	30	0	1108.4	0.031				-1	 	0	47	363.17432101378233	724.3340890943647	2	363.1737976074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3626	3643	7269
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7294	24.023	NaN	7228.9	30	0	1510.2	0.214	+			4553	ATLDVAVRR	9	73	500.79894057644094	999.5833282196819	2	500.79827880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATLDVAVRR_	ENSG00000100429|ENST00000216271|HDAC10;ENST00000415993.5_1_22:50683938-50688578:-|nuORF;ENST00000454936.5_1_22:50684197-50686327:-|nuORF;ENST00000477814.5_1_22:50684197-50686750:-|nuORF;ENST00000496235.5_1_22:50685302-50686327:-|nuORF;ENST00000497036.5_1_22:50684150-50687609:-|nuORF;ENST00000497952.5_1_22:50685106-50686347:-|nuORF;HDAC10|p.G498D|1|0.4|ENSG00000100429|chr22:50246896-50246896|C/T|missense_variant;nc|ENSG00000100429|Q969S8-2|HDAC10;nc|ENSG00000100429|Q969S8-4|HDAC10	98.58198989935565	0.04066992115528678	3				NaN	NaN	0	NaN	3643	3649	7293
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7295	24.026	NaN	5734.1	30	0	1386.8	0.106	+			37713	SLSSRARRPV	10	67	376.8923536474445	NaN	0	376.8923645019531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLSSRARRPV_	ENST00000530353.1_1_8:145980074-145980368:-|nuORF	21.9598887501803	0.4201028297492154	3				NaN	NaN	0	NaN	3644	3649	7293
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7296	24.028	NaN	1968.1	30	0	239.09	0.106	+			41891	SVTSPIKMK	9	46	495.78703238400146	989.559511834803	2	495.78619384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVTSPIKMK_	ENSG00000082258|ENST00000264157|CCNT2;nc|ENSG00000082258|O60583-2|CCNT2	62.107414245175825	0.1960472003779324	3				NaN	NaN	0	NaN	3645	3649	7293
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7297	24.03	NaN	2239	30	0	302.51	0.036	+			10423	EVIPDSRKQ	9	45	536.2921517543783	NaN	0	536.2923583984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EVIPDSRKQ_	nc|ENSG00000167984|Q7RTR2-2|NLRC3	20.94693142431847	0.3660861156085067	3				NaN	NaN	0	NaN	3646	3649	7293
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7311	24.06	NaN	14279	30	0	2512.6	0.214	+			5454	ATYSVGMQK	9	71	492.74502506143557	983.4754971896712	2	492.74456787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATYSVGMQK_	ENSG00000131941|ENST00000254260|RHPN2;ENST00000592247.1_1_19:33470904-33481620:-|nuORF;nc|ENSG00000131941|Q8IUC4-2|RHPN2;nc|ENSG00000258628|A8MT19|RHPN2P1	200.15690381979954	3.265422741743988E-05	3				NaN	NaN	0	NaN	3657	3652	7310
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7312	24.063	NaN	6767.9	30	0	941.07	0.106	+			48853	VVCEYIVKK	9	72	569.3206509652151	1136.6267489972302	2	569.320556640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_VVC(Carbamidomethyl (C))EYIVKK_	EIF2S3|p.I441Nfs*4|1|0.29|ENSG00000130741|chrX:24073223-24073224|-/A|frameshift_variant;ENSG00000130741|ENST00000253039|EIF2S3;ENSG00000180574|ENST00000538173|EIF2S3B;nc|ENSG00000180574|Q2VIR3-2|EIF2S3B	139.97047562133406	0.010493916756945389	3				NaN	NaN	0	NaN	3658	3652	7310
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7313	24.065	NaN	4844.9	30	0	1163.4	0.106	+			10673	EYSKQMQRF	9	59	608.7920526096291	1215.569552286058	2	608.7926025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EYSKQMQRF_	ENSG00000116478|ENST00000373548|HDAC1;ENSG00000196591|ENST00000519065|HDAC2;ENST00000463172.5_1_1:32757770-32792715:+|nuORF;ENST00000481281.5_1_1:32757770-32793222:+|nuORF;nc|ENSG00000196591|Q92769-3|HDAC2	44.116797842482775	0.37197099687881774	3				NaN	NaN	0	NaN	3659	3652	7310
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7314	24.067	NaN	1480.9	30	0	269.82	0.035				-1	GCTWMVCD	8	46	514.685056021906	1027.355559110612	2	514.685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_GC(Carbamidomethyl (C))TWMVC(Carbamidomethyl (C))D_	ENST00000321023.5_1_12:6204574-6232125:-|nuORF	20.481830146152948	0.8005983782650069	3				NaN	NaN	0	NaN	3660	3652	7310
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7327	24.094	NaN	2220	30	0	456.83	0.214			+	-1	PCPLRMSSCS	10	41	577.2458765771893	1152.4772002211785	2	577.244873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_PCPLRM(Oxidation (M))SSC(Carbamidomethyl (C))S_	REV__ENST00000552577.5_1_12:49491457-49495325:-|nuORF	21.9598887501803	0.7004979571547932	3				NaN	NaN	0	NaN	3670	3655	7326
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7328	24.098	NaN	1649.4	30	0	456.6	0.035			+	44363	TSKIEKGNK	9	45	335.52938288499143	1003.5663192551743	3	335.52947998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TSKIEKGNK_	REV__tr|U7SGG1|U7SGG1_FUSNUToxin-antitoxinsystemYwqKfamilyantitoxin(Fragment)OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02208PE=4SV=1;REV__tr|U7T3F2|U7T3F2_FUSNUPhophatidylinositol-4-phosphate5-kinaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00619PE=4SV=1	23.04248740728303	0.5879033540491928	3				NaN	NaN	0	NaN	3671	3655	7326
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7340	24.123	NaN	1664.5	30	0	198.28	0.214	+			24435	LGCLLRAKGT	10	48	344.53802490234375	NaN	0	344.53802490234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LGCLLRAKGT_	ENSG00000130821|ENST00000253122|SLC6A8;ENST00000431994.5_1_16:32890029-32891910:-|nuORF;ENST00000485324.1_1_X:152959908-152960666:+|nuORF;nc|ENSG00000130821|P48029-2|SLC6A8;nc|ENSG00000130821|P48029-3|SLC6A8;nc|ENSG00000130821|P48029-4|SLC6A8	18.262085536374414	0.4201028297492154	3				NaN	NaN	0	NaN	3680	3658	7339
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7341	24.127	NaN	2333.2	30	0	531.74	0.106			+	33554	RLFGRGLSW	9	52	546.3084961450203	1090.6024393568405	2	546.3085327148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RLFGRGLSW_	REV__ENSG00000011295|ENST00000261647|TTC19;REV__ENST00000497842.6_1_17:15903138-15905245:+|nuORF	40.5726180659479	0.4135428067754104	3				NaN	NaN	0	NaN	3681	3658	7339
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7342	24.129	NaN	1045.1	30	0	253.75	0.034			+	13506	GLPGPPYFI	9	23	480.7615661621094	NaN	0	480.7615661621094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GLPGPPYFI_	REV__ENSG00000106479|ENST00000223210|ZNF862;REV__ENST00000488265.1_1_7:149545263-149547465:+|nuORF;REV__ZNF862|p.D271Mfs*9|2|0.42|ENSG00000106479|chr7:149848298-149848298|G/-|frameshift_variant	14.664097394203935	0.38735045005659413	3				NaN	NaN	0	NaN	3682	3658	7339
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7354	24.154	NaN	2276.6	30	0	630.65	0.214				-1	ETLKVMKGVA	10	41	364.54164351627065	1090.603101149012	3	364.54156494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ETLKVM(Oxidation (M))KGVA_	ENSG00000196335|ENST00000355870|STK31;nc|ENSG00000196335|Q9BXU1-2|STK31;nc|ENSG00000196335|Q9BXU1-3|STK31;STK31|p.P904Qfs*31|1|0.07|ENSG00000196335|chr7:23790896-23790897|-/AATATTTTACATATTT|frameshift_variant;STK31|p.P983Qfs*16|1|0.32|ENSG00000196335|chr7:23832252-23832252|C/-|frameshift_variant	32.75053402867276	0.6123771875927935	3				NaN	NaN	0	NaN	3691	3661	7353
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7355	24.158	NaN	1426.5	30	0	212.27	0.106				-1	 	0	38	453.7197595802984	905.4249662273968	2	453.7195129394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3692	3661	7353
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7356	24.16	NaN	972.5	30	0	106.46	0.032			+	24524	LGLAKAAE	8	33	386.7321734582211	771.4497939832422	2	386.73193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LGLAKAAE_	REV__ENSG00000089154|ENST00000300648|GCN1	42.47446043378293	0.6409579893742323	3				NaN	NaN	0	NaN	3693	3661	7353
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7369	24.187	NaN	1576.5	30	0	252.37	0.214			+	35120	SAGTTIYEKG	10	49	513.7582053026985	1025.5018576721968	2	513.7582397460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAGTTIYEKG_	REV__tr|U7SJH8|U7SJH8_FUSNUATP-dependentzincmetalloproteaseFtsHOS=FusobacteriumnucleatumCTI-5OX=1316586GN=ftsHPE=3SV=1	31.529811441608018	0.6223461015008678	3				NaN	NaN	0	NaN	3703	3664	7368
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7370	24.191	NaN	1057.9	30	0	173.26	0.034	+			6428	AVVSLHVSK	9	35	470.2845776391074	NaN	0	470.2840576171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVVSLHVSK_	ENSG00000125676|ENST00000245838|THOC2	25.57405402267927	0.3484490411150625	3				NaN	NaN	0	NaN	3704	3664	7368
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7383	24.218	NaN	3693.7	30	0	1771.9	0.214			+	36880	SIGLRIKSP	9	42	324.2064433432321	969.5975006298963	3	324.2062072753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIGLRIKSP_	REV__ENST00000513585.5_1_5:112312601-112328430:+|nuORF	18.324413293986947	0.6112419832031293	3				NaN	NaN	0	NaN	3714	3667	7382
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7384	24.222	NaN	2302.4	30	0	397.37	0.106			+	13232	GIIQAGWSGAP	11	46	528.778968070443	1055.543383207686	2	528.7791137695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GIIQAGWSGAP_	REV__nc|ENSG00000185198|Q6UWY2|PRSS57	48.601550744091256	0.44024757269956427	3				NaN	NaN	0	NaN	3715	3667	7382
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7385	24.224	NaN	2526.8	30	0	626.16	0.106	+			28401	NEREEQRD	8	36	538.241507288562	NaN	0	538.2412719726562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NEREEQRD_	ENSG00000150722|ENST00000682840|PPP1R1C;ENST00000494189.1_1_2:182968515-182982019:+|nuORF;nc|ENSG00000150722|Q8WVI7-2|PPP1R1C	21.9598887501803	1.7418937515398478	3				NaN	NaN	0	NaN	3716	3667	7382
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7386	24.226	NaN	1756.9	30	0	387.29	0.106	+			35560	SAVWRHFQ	8	43	344.178205024517	NaN	0	344.1783142089844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SAVWRHFQ_	ENST00000462616.1_1_9:139311477-139313651:+|nuORF	33.51558372728122	1.7418937515398478	3				NaN	NaN	0	NaN	3717	3667	7382
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7387	24.227	NaN	3451.4	30	0	570.2	0.036	+			29260	NYARGHYTI	9	57	547.7728468506695	1093.5311407681388	2	548.2747192382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NYARGHYTI_	ENSG00000075886|ENST00000321253|TUBA3D;ENSG00000123416|ENST00000336023|TUBA1B;ENSG00000127824|ENST00000248437|TUBA4A;ENSG00000152086|ENST00000312988|TUBA3E;ENSG00000167552|ENST00000301071|TUBA1A;ENSG00000167553|ENST00000301072|TUBA1C;ENSG00000198033|ENST00000400113|TUBA3C;ENST00000462806.5_1_2:220116196-220118580:-|nuORF;ENST00000530835.1_1_11:90015825-90016947:+|nuORF;ENST00000548363.1_1_12:49580068-49582762:-|nuORF;ENST00000550254.1_1_12:49580068-49580335:-|nuORF;nc|ENSG00000127824|P68366-2|TUBA4A;nc|ENSG00000167552|Q71U36-2|TUBA1A;nc|ENSG00000198033|P0DPH7-2|TUBA3C;TUBA3C|p.G144Afs*24|1|0.32|ENSG00000198033|chr13:19177554-19177554|A/-|frameshift_variant;TUBA3C|p.T361Rfs*18|1|0.17|ENSG00000198033|chr13:19174136-19174136|G/-|frameshift_variant;TUBA3D|p.G366Efs*13|1|0.17|ENSG00000075886|chr2:131482588-131482588|G/-|frameshift_variant;TUBA3D|p.V328Pfs*54|1|0.45|ENSG00000075886|chr2:131480665-131480666|-/CCCAAAGA|frameshift_variant;TUBA3E|p.Q176Rfs*14|1|0.58|ENSG00000152086|chr2:130194316-130194316|G/-|frameshift_variant;TUBA4A|p.V182Gfs*32|1|0.04|ENSG00000127824|chr2:219251156-219251157|-/TACACCA|frameshift_variant	49.44154591367651	0.3095138337212152	3				NaN	NaN	0	NaN	3718	3667	7382
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7399	24.253	NaN	4515.3	30	0	867.71	0.214	+			41733	SVSGYIYHK	9	59	527.2718076774851	1052.52906242177	2	527.2720336914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSGYIYHK_	ENSG00000005007|ENST00000262803|UPF1;nc|ENSG00000005007|Q92900|UPF1	71.87747018426188	0.13267044672804276	3				NaN	NaN	0	NaN	3727	3670	7398
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7400	24.257	NaN	4195.9	30	0	2294.8	0.106	+			47373	VPHAAEPGYL	10	44	351.85050196096086	1052.5296764830825	3	351.85040283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VPHAAEPGYL_	ENSG00000253953|ENST00000519479|PCDHGB4;nc|ENSG00000253953|Q9UN71-2|PCDHGB4	19.359975847455235	0.718073418909716	3				NaN	NaN	0	NaN	3728	3670	7398
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7401	24.259	NaN	1511.1	30	0	172.48	0.106	+			2217	ALRALVKEQG	10	55	542.8278188498349	1083.6410847664697	2	542.8272705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ALRALVKEQG_	ENSG00000172725|ENST00000341356|CORO1B	54.776311868738084	0.41334902933431344	3				NaN	NaN	0	NaN	3729	3670	7398
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7402	24.261	NaN	1224.4	30	0	364.96	0.106			+	25084	LLMGHLAEL	9	43	498.780799860651	995.547046788102	2	498.78033447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LLMGHLAEL_	REV__ENSG00000127980|ENST00000248633|PEX1;REV__ENST00000484913.5_1_7:92116773-92148321:-|nuORF;REV__nc|ENSG00000127980|O43933-2|PEX1	26.69291269510374	0.5537881896960711	3				NaN	NaN	0	NaN	3730	3670	7398
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7403	24.262	NaN	1398.3	30	0	239.89	0.033			+	30271	PTFCGKSK	8	36	434.221504795157	NaN	0	434.2212219238281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PTFCGKSK_	REV__ENSG00000064218|ENST00000190165|DMRT3	24.20275056022122	1.7418937515398478	3				NaN	NaN	0	NaN	3731	3670	7398
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7414	24.288	NaN	1726.7	30	0	251.98	0.214			+	50538	YARPIRPQ	8	50	334.19481876532024	999.5626268961607	3	334.19427490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YARPIRPQ_	REV__ENST00000590758.3_1_17:42883048-42908178:-|nuORF	26.79610172149135	0.7524337208463756	3				NaN	NaN	0	NaN	3739	3673	7413
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7415	24.292	NaN	1140.7	30	0	156.7	0.035	+			2568	AQATVLHLK	9	44	490.7987261175317	979.5828993018634	2	490.79779052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AQATVLHLK_	ENSG00000185619|ENST00000362003|PCGF3;ENST00000430644.5_1_4:728709-759864:+|nuORF;ENST00000440452.5_1_4:728709-759864:+|nuORF;nc|ENSG00000185619|Q3KNV8-2|PCGF3	35.15202426646627	0.4747332964206883	3				NaN	NaN	0	NaN	3740	3673	7413
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7428	24.319	NaN	1936.7	30	0	189.31	0.139				-1	 	0	44	344.22472037313264	686.4348878130653	2	344.224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3750	3676	7427
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7442	24.35	NaN	10738	30	0	2145.3	0.215	+			14879	GTLPHPLQR	9	41	340.1980526589596	1017.5723285770789	3	340.19793701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTLPHPLQR_	ENSG00000111319|ENST00000228916|SCNN1A;ENST00000540037.5_2_12:6464995-6472854:-|nuORF;nc|ENSG00000111319|P37088-2|SCNN1A;nc|ENSG00000111319|P37088-3|SCNN1A;nc|ENSG00000111319|P37088-4|SCNN1A;nc|ENSG00000111319|P37088-5|SCNN1A;nc|ENSG00000111319|P37088-6|SCNN1A	31.954861631926434	0.5046124803899898	3				NaN	NaN	0	NaN	3761	3679	7441
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7443	24.353	NaN	1466.7	30	0	403.11	0.036			+	40113	STPHPPSAPAP	11	28	529.7654418945312	NaN	0	529.7654418945312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STPHPPSAPAP_	REV__ENST00000302538.9_1_17:909091-909271:-|nuORF	19.996771675451527	0.456735970842152	3				NaN	NaN	0	NaN	3762	3679	7441
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7455	24.379	NaN	1707.3	30	0	266.29	0.214	+			48113	VSVACFDTL	9	36	477.7351107482362	NaN	0	477.7348937988281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSVACFDTL_	ENST00000478442.5_1_1:174843608-174846559:+|nuORF	53.351449002276354	0.18359631779194618	3				NaN	NaN	0	NaN	3771	3682	7454
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7456	24.383	NaN	1821.5	30	0	269.2	0.106			+	43475	TGPALHTIVV	10	55	336.5340870336301	NaN	0	336.86895751953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TGPALHTIVV_	REV__ENSG00000153048|ENST00000311052|CARHSP1	30.503639358989545	0.4000169810673414	3				NaN	NaN	0	NaN	3772	3682	7454
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7457	24.385	NaN	1269.2	30	0	178.74	0.034			+	17270	IAAILYLPA	9	43	472.79290771484375	NaN	0	472.79290771484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IAAILYLPA_	REV__ENSG00000166575|ENST00000305494|TMEM135;REV__ENST00000529023.5_1_11:86749009-86868454:+|nuORF;REV__nc|ENSG00000166575|Q86UB9-2|TMEM135	39.021493756699265	0.2805557132942146	3				NaN	NaN	0	NaN	3773	3682	7454
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7470	24.412	NaN	3456.8	30	0	536.24	0.145	+			40036	STMVDVRVMKK	11	66	647.3544661528937	1292.6943793725873	2	647.3548583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STMVDVRVMKK_	ENSG00000085224|ENST00000373344|ATRX;nc|ENSG00000085224|P46100-2|ATRX;nc|ENSG00000085224|P46100-3|ATRX;nc|ENSG00000085224|P46100-4|ATRX;nc|ENSG00000085224|P46100-5|ATRX	65.69465075029274	0.27262252711350304	3				NaN	NaN	0	NaN	3783	3685	7469
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7481	24.439	NaN	4211.1	30	0	1719.5	0.214	+			7200	DAIDRYLK	8	61	331.850497304859	992.5296625147771	3	331.8502197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DAIDRYLK_	tr|U7SMB6|U7SMB6_FUSNUdTDP-4-dehydrorhamnosereductaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01944PE=3SV=1	19.359975847455235	0.7988239741663654	3				NaN	NaN	0	NaN	3791	3688	7480
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7482	24.443	NaN	3324	30	0	421.37	0.106				-1	IQEKQVTTLAL	11	60	643.3719495217433	NaN	0	643.3724365234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))IQEKQVTTLAL_	ENST00000239231.6_1_5:167979898-167979994:-|nuORF	21.0322348234405	0.456735970842152	3				NaN	NaN	0	NaN	3792	3688	7480
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7483	24.445	NaN	1447.9	30	0	218.47	0.036	+			37885	SNYNKEAIK	9	36	533.7792358398438	NaN	0	533.7792358398438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SNYNKEAIK_	ENSG00000153253|ENST00000283254|SCN3A;nc|ENSG00000153253|Q9NY46-2|SCN3A;nc|ENSG00000153253|Q9NY46-4|SCN3A;nc|ENSG00000153253|Q9NY46|SCN3A;SCN3A|p.T1958Nfs*14|1|0.29|ENSG00000153253|chr2:165090280-165090281|-/T|frameshift_variant;SCN3A|p.T1958Qfs*16|1|0.28|ENSG00000153253|chr2:165090281-165090281|T/-|frameshift_variant	20.94693142431847	0.3660861156085067	3				NaN	NaN	0	NaN	3793	3688	7480
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7497	24.474	NaN	3800.2	30	0	644.82	0.211	+			9980	ERIIAPMRWGL	11	70	671.3768713363023	1340.7391897394045	2	671.3778076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ERIIAPMRWGL_	ENSG00000183624|ENST00000383463|HMCES;HMCES|p.K276Rfs*59|1|0.32|ENSG00000183624|chr3:129302137-129302137|A/-|frameshift_variant;HMCES|p.T234Sfs*32|1|0.17|ENSG00000183624|chr3:129302014-129302015|-/G|frameshift_variant	25.125986553469783	0.7262400895305658	3				NaN	NaN	0	NaN	3804	3691	7496
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7498	24.478	NaN	2285.1	30	0	316.26	0.037				-1	PPPSWHPGIC	10	60	574.2697754686972	1146.5249980041942	2	574.26904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_PPPSWHPGIC(Carbamidomethyl (C))_	ENST00000442677.3_1_10:73474904-73475261:+|nuORF;ENST00000466757.7_1_10:73472535-73475261:+|nuORF	30.503639358989545	0.6307262373768582	3				NaN	NaN	0	NaN	3805	3691	7496
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7509	24.503	NaN	1119.8	30	0	191.97	0.141	+			16861	HPGAKKMT	8	34	435.23482232884044	NaN	0	435.2352294921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HPGAKKMT_	ENSG00000111981|ENST00000229708|ULBP1;ULBP1|p.P215Qfs*27|1|0.37|ENSG00000111981|chr6:149970031-149970031|C/-|frameshift_variant	19.359975847455235	1.7418937515398478	3				NaN	NaN	0	NaN	3813	3694	7508
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7522	24.532	NaN	5154.9	30	0	473.36	0.214	+			49635	VYIEKNDKL	9	64	561.3142078352477	1120.6138627372952	2	561.3136596679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYIEKNDKL_	ENSG00000065361|ENST00000267101|ERBB3;ENST00000546884.1_1_12:56474084-56480451:+|nuORF;ENST00000549472.1_1_12:56480319-56481575:+|nuORF;ERBB3|p.A805Gfs*22|1|0.1|ENSG00000065361|chr12:56097177-56097178|-/G|frameshift_variant;ERBB3|p.A805Hfs*95|1|0.33|ENSG00000065361|chr12:56097178-56097178|G/-|frameshift_variant;ERBB3|p.R1080Vfs*22|1|0.14|ENSG00000065361|chr12:56101093-56101093|C/-|frameshift_variant;nc|ENSG00000065361|P21860-3|ERBB3;nc|ENSG00000065361|P21860-4|ERBB3	104.0567914643314	0.03506238181059741	3				NaN	NaN	0	NaN	3823	3697	7521
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7523	24.536	NaN	1175.2	30	0	320.86	0.036	+			23321	KYRDNQKE	8	35	540.7772723741804	NaN	0	540.7771606445312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KYRDNQKE_	tr|U7SLK8|U7SLK8_FUSNUPolysaccharidebiosynthesisproteinC-terminaldomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01961PE=4SV=1	30.503639358989545	1.7418937515398478	3				NaN	NaN	0	NaN	3824	3697	7521
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7535	24.561	NaN	2423.8	30	0	688.21	0.144			+	33899	RRRPADPEG	9	42	527.2821327456471	1052.5497125580941	2	527.2828979492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RRRPADPEG_	REV__ZBTB40|p.K799Rfs*9|1|0.28|ENSG00000184677|chr1:22512063-22512063|C/-|frameshift_variant	27.882242232435846	0.5426732730940306	3				NaN	NaN	0	NaN	3833	3700	7534
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7548	24.59	NaN	4893.6	30	0	1225.4	0.214	+			29509	PDMQELLRS	9	54	363.5176294714293	1087.531059014488	3	363.517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PDMQELLRS_	ENSG00000167716|ENST00000409644|WDR81;nc|ENSG00000167716|Q562E7-4|WDR81;WDR81|p.F1429Sfs*15|1|0.43|ENSG00000167716|chr17:1732449-1732449|T/-|frameshift_variant;WDR81|p.H1752Tfs*33|1|0.25|ENSG00000167716|chr17:1735641-1735641|C/-|frameshift_variant	25.57405402267927	0.5642445186134241	3				NaN	NaN	0	NaN	3843	3703	7547
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7549	24.594	NaN	4596.1	30	0	670.76	0.106			+	24018	LEEDYKKEI	9	65	583.8007743423874	1165.5869957515747	2	583.8006591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LEEDYKKEI_	REV__ENSG00000149591|ENST00000392951|TAGLN;REV__ENST00000533863.1_2_11:117073729-117073927:+|nuORF	169.6522961985778	0.0028262690464207238	3				NaN	NaN	0	NaN	3844	3703	7547
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7550	24.596	NaN	2462.6	30	0	380.87	0.036	+			39657	STIFHVQQR	9	55	558.3022311116147	1114.5899092900293	2	558.3005981445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STIFHVQQR_	ENSG00000176920|ENST00000425340|FUT2	51.19269402634007	0.2889735674168909	3				NaN	NaN	0	NaN	3845	3703	7547
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7560	24.623	NaN	3359.4	30	0	523.45	0.214				-1	ASYYRKGGC	9	49	531.2455002486736	NaN	0	531.2454223632812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_ASYYRKGGC(Carbamidomethyl (C))_	ENSG00000171094|ENST00000389048|ALK	35.61828744233558	0.29773779453147337	3				NaN	NaN	0	NaN	3852	3706	7559
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7561	24.626	NaN	1686.9	30	0	329.6	0.035			+	11458	FNELIIKR	8	49	516.8156393385864	NaN	0	516.8151245117188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FNELIIKR_	REV__tr|U7SJF1|U7SJF1_FUSNUThiamine-phosphatepyrophosphorylaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02118PE=4SV=1	54.776311868738084	1.7418937515398478	3				NaN	NaN	0	NaN	3853	3706	7559
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7574	24.654	NaN	2976	30	0	481.99	0.145	+			41634	SVQSDQGYISR	11	44	620.3010508264277	1238.5875487196554	2	620.3016357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVQSDQGYISR_	ENSG00000177663|ENST00000319363|IL17RA;nc|ENSG00000177663|Q96F46-2|IL17RA	97.59673978297657	0.06767575942783079	3				NaN	NaN	0	NaN	3863	3709	7573
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7586	24.682	NaN	2127.6	30	0	864.73	0.214	+			51410	YTQLLPLPF	9	46	364.5413844566152	NaN	0	364.5413513183594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YTQLLPLPF_	ENST00000478284.5_1_1:26146491-26150180:+|nuORF	20.94693142431847	0.3660861156085067	3				NaN	NaN	0	NaN	3872	3712	7585
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7587	24.685	NaN	1069.4	30	0	192.9	0.035	+			20467	KEVSSATNAL	10	36	510.27190087001844	1018.5292488068369	2	510.27215576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEVSSATNAL_	ENSG00000077312|ENST00000243563|SNRPA;ENST00000598923.1_1_19:41257313-41268988:+|nuORF;SNRPA|p.V133Wfs*15|1|0.34|ENSG00000077312|chr19:40759576-40759576|C/-|frameshift_variant	31.634271133179894	0.6214930414500597	3				NaN	NaN	0	NaN	3873	3712	7585
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7599	24.711	NaN	5025.5	30	0	1154.2	0.144	+			18318	IPTKQTQTF	9	63	532.2928496796662	1062.5711464261324	2	532.2926635742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IPTKQTQTF_	ENSG00000109971|ENST00000534624|HSPA8;ENSG00000126803|ENST00000247207|HSPA2;ENSG00000173110|ENST00000309758|HSPA6;ENST00000397642.3_1_1:247394123-247394771:+|nuORF;ENST00000425843.1_1_X:120337248-120337797:-|nuORF;ENST00000445535.1_1_1:161576981-161578004:+|nuORF;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;ENST00000552265.2_1_12:111822376-111823062:+|nuORF;HSPA6|p.D632Gfs*9|1|0.12|ENSG00000173110|chr1:161526547-161526548|-/G|frameshift_variant;HSPA8|p.K569Dfs*6|1|0.3|ENSG00000109971|chr11:123058302-123058303|TC/-|frameshift_variant;nc|ENSG00000109971|P11142-2|HSPA8	93.1432384553994	0.056003526918089595	3				NaN	NaN	0	NaN	3882	3715	7598
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7627	24.782	NaN	1011.9	30	0	196.11	0.142			+	11729	FSENGAARL	9	34	482.74544685973996	963.4763407862799	2	482.7452087402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FSENGAARL_	REV__ENSG00000025772|ENST00000372813|TOMM34	32.81241826257853	0.4965981579233955	3				NaN	NaN	0	NaN	3901	3724	7626
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7653	24.843	NaN	4641.6	30	0	746.78	0.214	+			14857	GTLMWHQMK	9	52	574.2728978222448	1146.5312427112895	2	574.2734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_GTLMWHQM(Oxidation (M))K_	ENST00000346169.6_1_3:184032401-184033585:+|nuORF;ENST00000352767.7_2_3:184032446-184033585:+|nuORF	71.87747018426188	0.13267044672804276	3				NaN	NaN	0	NaN	3921	3730	7652
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7654	24.847	NaN	3078.7	30	0	423.34	0.106	+			37979	SPHTGIQEY	9	56	516.2429904465632	NaN	0	516.2430419921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SPHTGIQEY_	ENSG00000104324|ENST00000220763|CPQ	74.25504064058377	0.09106938647426577	3				NaN	NaN	0	NaN	3922	3730	7652
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7655	24.849	NaN	1132.8	30	0	355.14	0.035				-1	LLEQAMIGP	9	33	494.2603750262184	NaN	0	494.2606201171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_LLEQAM(Oxidation (M))IGP_	ENSG00000008838|ENST00000394128|MED24;ENST00000581054.1_1_17:38192365-38210656:-|nuORF;MED24|p.E720Gfs*14|1|0.41|ENSG00000008838|chr17:40023224-40023225|-/A|frameshift_variant;MED24|p.K704Sfs*8|1|0.18|ENSG00000008838|chr17:40023272-40023272|G/-|frameshift_variant;MED24|p.P805Rfs*53|1|0.29|ENSG00000008838|chr17:40022663-40022663|G/-|frameshift_variant;nc|ENSG00000008838|O75448-2|MED24	19.359975847455235	0.3714571876404798	3				NaN	NaN	0	NaN	3923	3730	7652
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7682	24.91	NaN	2700.9	30	0	518.52	0.214	+			15643	GVLGSSKVLAK	11	66	529.832118799204	1057.6496846652078	2	529.832275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVLGSSKVLAK_	ENSG00000160216|ENST00000291572|AGPAT3;nc|ENSG00000160216|Q9NRZ7-2|AGPAT3;nc|ENSG00000160216|Q9NRZ7-3|AGPAT3	82.49433358170734	0.13157841501534762	3				NaN	NaN	0	NaN	3944	3736	7681
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7683	24.913	NaN	4279	30	0	804.45	0.106	+			42302	TAFCPLLKLS	10	55	364.87430930682547	1091.6010985206765	3	364.8741149902344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAFCPLLKLS_	ENST00000263791.9_1_15:40300307-40301836:+|nuORF	37.50817390946774	0.5721060100277453	3				NaN	NaN	0	NaN	3945	3736	7681
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7684	24.915	NaN	4348.3	30	0	306.46	0.042			+	-1	RSGYCRLMWRH	11	75	769.3645139746534	1536.7144750161067	2	769.364990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_RSGYC(Carbamidomethyl (C))RLM(Oxidation (M))WRH_	REV__ENSG00000187116|ENST00000432233|LILRA5;REV__ENST00000477720.1_1_19:54818977-54822924:-|nuORF;REV__ENST00000489504.5_1_19:54822600-54824295:-|nuORF;REV__nc|ENSG00000187116|A6NI73-2|LILRA5;REV__nc|ENSG00000187116|A6NI73-3|LILRA5;REV__nc|ENSG00000187116|A6NI73-4|LILRA5	19.996771675451527	0.7768568223548057	3				NaN	NaN	0	NaN	3946	3736	7681
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7696	24.942	NaN	1206.7	30	0	171.93	0.214			+	17680	IEKQLTPAK	9	50	514.3108248063598	1026.6070966795196	2	514.310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IEKQLTPAK_	REV__ENSG00000031691|ENST00000335783|CENPQ	27.882242232435846	0.5426732730940306	3				NaN	NaN	0	NaN	3955	3739	7695
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7697	24.946	NaN	1905.4	30	0	299.74	0.038	+			25680	LRFRAFQQST	10	58	627.3395769500512	1252.6646009669023	2	627.341064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LRFRAFQQST_	ENSG00000119977|ENST00000371217|TCTN3;nc|ENSG00000119977|Q6NUS6-2|TCTN3;nc|ENSG00000119977|Q6NUS6-3|TCTN3	24.519189625965996	0.6795976720565101	3				NaN	NaN	0	NaN	3956	3739	7695
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7709	24.972	NaN	1368.6	30	0	182.18	0.143			+	35724	SDLRILKY	8	52	336.5340870336301	NaN	0	336.533935546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SDLRILKY_	REV__ENSG00000129003|ENST00000644861|VPS13C;REV__nc|ENSG00000129003|Q709C8-2|VPS13C;REV__nc|ENSG00000129003|Q709C8-3|VPS13C;REV__nc|ENSG00000129003|Q709C8-4|VPS13C;REV__VPS13C|p.D1169Ifs*15|1|0.38|ENSG00000129003|chr15:61962469-61962469|C/-|frameshift_variant;REV__VPS13C|p.E2463Nfs*18|1|0.25|ENSG00000129003|chr15:61920157-61920157|C/-|frameshift_variant;REV__VPS13C|p.N1066Ifs*25|2|0.27|ENSG00000129003|chr15:61964716-61964716|T/-|frameshift_variant;REV__VPS13C|p.N3163Sfs*6|1|0.05|ENSG00000129003|chr15:61882732-61882733|-/TTATCATCAC|frameshift_variant;REV__VPS13C|p.P3597Lfs*3|1|0.26|ENSG00000129003|chr15:61868732-61868732|G/-|frameshift_variant;REV__VPS13C|p.S1021Hfs*3|1|0.08|ENSG00000129003|chr15:61964852-61964852|A/-|frameshift_variant;REV__VPS13C|p.S463Vfs*3|1|0.39|ENSG00000129003|chr15:61991770-61991771|-/T|frameshift_variant	28.2542754592877	1.7418937515398478	3				NaN	NaN	0	NaN	3965	3742	7708
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7721	25	NaN	1090.9	30	0	262.89	0.214	+			27437	MLGRIVFAW	9	36	546.8057861328125	NaN	0	546.8057861328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MLGRIVFAW_	ENSG00000140688|ENST00000327237|RUSF1;ENST00000541442.5_1_16:31508264-31519694:-|nuORF	25.450171626174864	0.34907449758287085	3				NaN	NaN	0	NaN	3974	3745	7720
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7722	25.004	NaN	911.5	30	0	113.46	0.106			+	-1	AMMPSILGK	9	34	482.2520128858154	962.4894728384309	2	482.2501525878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_AMM(Oxidation (M))PSILGK_	REV__CASZ1|p.Y1191*|1|0.04|ENSG00000130940|chr1:10646251-10646251|G/-|frameshift_variant;REV__ENSG00000130940|ENST00000377022|CASZ1;REV__ENST00000496432.6_1_1:10713095-10754402:-|nuORF;REV__nc|ENSG00000130940|Q86V15-2|CASZ1	45.9519527083369	0.35044536499095585	3				NaN	NaN	0	NaN	3975	3745	7720
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7723	25.006	NaN	1298.6	30	0	227.52	0.106			+	21551	KNVAICTIGR	10	48	537.8094482421875	NaN	0	537.8094482421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KNVAICTIGR_	REV__tr|U7STU3|U7STU3_FUSNUSpermidine/putrescinetransportsystemsubstrate-bindingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01188PE=4SV=1	25.125986553469783	0.41767453237088564	3				NaN	NaN	0	NaN	3976	3745	7720
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7724	25.008	NaN	1035	30	0	251.68	0.036				-1	QGNVLMVNY	9	33	527.2543334960938	NaN	0	527.2543334960938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_QGNVLM(Oxidation (M))VNY_	ENST00000230640.9_1_5:54603803-54618219:+|nuORF	24.20275056022122	0.35506675290109213	3				NaN	NaN	0	NaN	3977	3745	7720
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7737	25.036	NaN	4607.5	30	0	508.35	0.142	+			41129	SVITIVKSK	9	61	487.8161015207836	973.6176501083672	2	487.8153381347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVITIVKSK_	ENSG00000197063|ENST00000357736|MAFG	112.10723106719422	0.02684780151337622	3				NaN	NaN	0	NaN	3987	3748	7736
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7749	25.064	NaN	13039	30	0	7556.5	0.214	+			41130	SVITIVKSK	9	61	325.5465504708389	973.6178220127167	3	325.5462341308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVITIVKSK_	ENSG00000197063|ENST00000357736|MAFG	49.44154591367651	0.3095138337212152	3				NaN	NaN	0	NaN	3996	3751	7748
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7750	25.067	NaN	4135.8	30	0	494.9	0.106	+			18319	IPTKQTQTF	9	69	532.2928496796662	1062.5711464261324	2	532.293212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IPTKQTQTF_	ENSG00000109971|ENST00000534624|HSPA8;ENSG00000126803|ENST00000247207|HSPA2;ENSG00000173110|ENST00000309758|HSPA6;ENST00000397642.3_1_1:247394123-247394771:+|nuORF;ENST00000425843.1_1_X:120337248-120337797:-|nuORF;ENST00000445535.1_1_1:161576981-161578004:+|nuORF;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;ENST00000552265.2_1_12:111822376-111823062:+|nuORF;HSPA6|p.D632Gfs*9|1|0.12|ENSG00000173110|chr1:161526547-161526548|-/G|frameshift_variant;HSPA8|p.K569Dfs*6|1|0.3|ENSG00000109971|chr11:123058302-123058303|TC/-|frameshift_variant;nc|ENSG00000109971|P11142-2|HSPA8	87.69643885390035	0.07135982304947239	3				NaN	NaN	0	NaN	3997	3751	7748
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7751	25.07	NaN	3229.4	30	0	681.72	0.106	+			43182	TETTKFEKL	9	61	548.7982982027766	1095.582043472353	2	548.7982788085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TETTKFEKL_	CC2D1A|p.G898Vfs*45|1|0.32|ENSG00000132024|chr19:13929638-13929638|G/-|frameshift_variant;ENSG00000132024|ENST00000318003|CC2D1A;ENST00000589138.5_1_19:14029331-14037891:+|nuORF;ENST00000589224.1_1_19:14034393-14038165:+|nuORF;nc|ENSG00000132024|Q6P1N0-2|CC2D1A	56.43379154798735	0.2433427591689151	3				NaN	NaN	0	NaN	3998	3751	7748
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7752	25.071	NaN	1717.4	30	0	231.13	0.106				-1	 	0	57	394.7654376998301	NaN	0	394.765380859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	3999	3751	7748
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7753	25.073	NaN	1554.2	30	0	328.17	0.036			+	24563	LGMLFCDQR	9	44	541.7603759765625	NaN	0	541.7603759765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LGMLFCDQR_	REV__ENST00000379066.5_1_2:37543834-37543912:-|nuORF	27.882242232435846	0.3367954786602879	3				NaN	NaN	0	NaN	4000	3751	7748
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7764	25.099	NaN	3996	30	0	2215.7	0.214			+	43286	TFHPLAFVL	9	51	348.8658618931147	1043.575756279544	3	348.8659362792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TFHPLAFVL_	REV__ENSG00000101187|ENST00000217159|SLCO4A1;REV__nc|ENSG00000101187|Q96BD0-2|SLCO4A1;REV__nc|ENSG00000101187|Q96BD0-3|SLCO4A1;REV__nc|ENSG00000101187|Q96BD0-4|SLCO4A1	37.15910966729921	0.4535818937225704	3				NaN	NaN	0	NaN	4008	3754	7763
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7765	25.102	NaN	4482.6	30	0	772.46	0.106	+			23244	KYIHSANVL	9	64	522.7953474930855	1043.576142052971	2	522.7958374023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KYIHSANVL_	ENSG00000069956|ENST00000261845|MAPK6;ENSG00000100030|ENST00000215832|MAPK1;ENSG00000102882|ENST00000263025|MAPK3;ENSG00000141639|ENST00000400384|MAPK4;ENST00000478356.5_2_16:30128576-30134273:-|nuORF;ENST00000483869.1_1_16:30129346-30134419:-|nuORF;MAPK6|p.P206*|1|0.03|ENSG00000069956|chr15:52050053-52050054|CC/-|frameshift_variant;nc|ENSG00000100030|P28482-2|MAPK1;nc|ENSG00000102882|P27361-2|MAPK3;nc|ENSG00000102882|P27361-3|MAPK3	74.1650062923329	0.12277912660386392	3				NaN	NaN	0	NaN	4009	3754	7763
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7766	25.104	NaN	1478.8	30	0	290.24	0.106	+			10253	ETLAVPRE	8	40	457.7490403988601	NaN	0	457.7493591308594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ETLAVPRE_	ENSG00000196440|ENST00000423738|ARMCX4;nc|ENSG00000196440|Q5H9R4-2|ARMCX4;nc|ENSG00000196440|Q5H9R4-3|ARMCX4	27.882242232435846	1.7418937515398478	3				NaN	NaN	0	NaN	4010	3754	7763
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7767	25.106	NaN	1652.2	30	0	144.22	0.035	+			41297	SVLNIAREK	9	55	515.3061189507306	1028.597684968261	2	515.3074951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVLNIAREK_	ANKRD36C|p.F1404Lfs*4|1|0.33|ENSG00000174501|chr2:95856049-95856049|A/-|frameshift_variant;ANKRD36C|p.F1404Lfs*4|1|0.33|ENSG00000174501|chr2:95856049-95856049|A/-|frameshift_variant;ANKRD36C|p.F1404Lfs*4|1|0.33|ENSG00000174501|chr2:95856049-95856049|A/-|frameshift_variant;ENSG00000174501|ENST00000295246|ANKRD36C;ENSG00000174501|ENST00000295246|ANKRD36C;ENSG00000174501|ENST00000295246|ANKRD36C;ENSG00000196912|ENST00000359901|ANKRD36B;ENST00000534304.5_1_2:96525807-96601268:-|nuORF;nc|ENSG00000174501|Q5JPF3-3|ANKRD36C;nc|ENSG00000174501|Q5JPF3|ANKRD36C;nc|ENSG00000196912|Q8N2N9-2|ANKRD36B;nc|ENSG00000196912|Q8N2N9-3|ANKRD36B	51.19269402634007	0.2889735674168909	3				NaN	NaN	0	NaN	4011	3754	7763
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7778	25.132	NaN	3626.3	30	0	589.8	0.214			+	21092	KKPKHCRQ	8	49	512.7950344943889	1023.5755160555779	2	512.7948608398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KKPKHCRQ_	REV__ENSG00000145536|ENST00000274181|ADAMTS16;REV__nc|ENSG00000145536|Q8TE57-2|ADAMTS16	26.79610172149135	0.7524337208463756	3				NaN	NaN	0	NaN	4019	3757	7777
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7779	25.135	NaN	1321.3	30	0	349.04	0.037			+	28893	NQILTKFYE	9	35	578.3076171875	NaN	0	578.3076171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NQILTKFYE_	REV__tr|U7SH84|U7SH84_FUSNUHeptosyltransferaseIIOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02361PE=4SV=1	14.137123925751023	0.3891339986947948	3				NaN	NaN	0	NaN	4020	3757	7777
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7793	25.164	NaN	1900.2	30	0	760.3	0.214	+			15591	GVIAPRVQEA	10	34	347.2015517715289	NaN	0	347.2006530761719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVIAPRVQEA_	ENSG00000077063|ENST00000160373|CTTNBP2	38.80614096846853	0.372755673314885	3				NaN	NaN	0	NaN	4031	3760	7792
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7794	25.168	NaN	2705.9	30	0	987.2	0.106			+	25787	LSAQEKLGQ	9	51	487.2695878115977	972.5246226899955	2	487.2688903808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSAQEKLGQ_	REV__ENST00000579241.1_1_17:73486365-73488110:+|nuORF	66.42927471994793	0.16001998865088202	3				NaN	NaN	0	NaN	4032	3760	7792
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7795	25.17	NaN	634.15	30	0	108.47	0.106	+			29812	PKGVVAVL	8	40	391.7607747319809	NaN	0	391.76104736328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PKGVVAVL_	ENSG00000149403|ENST00000527524|GRIK4;ENST00000533291.5_1_11:120531027-120833419:+|nuORF;GRIK4|p.P123Qfs*15|1|0.1|ENSG00000149403|chr11:120819774-120819774|C/-|frameshift_variant;GRIK4|p.T481Rfs*6|1|0.57|ENSG00000149403|chr11:120905452-120905468|AACGGCACCTGGACGGG/-|frameshift_variant	28.2542754592877	1.7418937515398478	3				NaN	NaN	0	NaN	4033	3760	7792
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7796	25.172	NaN	1504.4	30	0	661.13	0.033	+			45422	TVWGAKQI	8	32	451.7582092285156	NaN	0	451.7582092285156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TVWGAKQI_	nc|ENSG00000003400|Q92851-5|CASP10;nc|ENSG00000003400|Q92851|CASP10	38.80614096846853	1.7418937515398478	3				NaN	NaN	0	NaN	4034	3760	7792
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7806	25.194	NaN	1282.7	30	0	229.88	0.214			+	20833	KIHEIPFI	8	43	498.7960483807613	NaN	0	498.7961730957031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KIHEIPFI_	REV__tr|U7T8N8|U7T8N8_FUSNUDUF2800domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00115PE=4SV=1	30.503639358989545	1.7418937515398478	3				NaN	NaN	0	NaN	4041	3763	7805
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7807	25.197	NaN	1577.5	30	0	250.01	0.106	+			15462	GTYVSSVPR	9	39	483.2560293109847	NaN	0	483.25592041015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTYVSSVPR_	ENSG00000204252|ENST00000229829|HLA-DOA;ENST00000485901.1_1_6:32974617-32975137:-|nuORF	37.81151784470057	0.28666463014928195	3				NaN	NaN	0	NaN	4042	3763	7805
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7808	25.199	NaN	1127.6	30	0	130.32	0.034	+			26798	LVSFCHIL	8	37	466.2576599121094	NaN	0	466.2576599121094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LVSFCHIL_	ENST00000375204.2_1_9:100053158-100058044:+|nuORF;ENST00000375206.6_1_9:100053158-100139173:+|nuORF;ENST00000529787.2_1_9:100053158-100088872:+|nuORF	44.53106598305862	1.7418937515398478	3				NaN	NaN	0	NaN	4043	3763	7805
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7823	25.23	NaN	1676.8	30	0	331.3	0.144	+			32139	QSLVQQRAF	9	49	538.7947739508623	NaN	0	538.7947387695312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QSLVQQRAF_	ENSG00000089053|ENST00000261819|ANAPC5;ENST00000534976.5_1_12:121756302-121773353:-|nuORF;ENST00000535472.5_1_12:121764442-121775147:-|nuORF;ENST00000535641.5_1_12:121766117-121773388:-|nuORF;ENST00000538334.1_1_12:121766117-121768505:-|nuORF	40.77816245573522	0.2702456086868081	3				NaN	NaN	0	NaN	4055	3766	7822
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7835	25.258	NaN	3855.5	30	0	452.19	0.145			+	18367	IQQPVKFRVYS	11	66	682.8855604520347	1363.7565679708694	2	682.8858032226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IQQPVKFRVYS_	REV__ENSG00000163686|ENST00000478253|ABHD6	55.721020083383095	0.36165090524447163	3				NaN	NaN	0	NaN	4064	3769	7834
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7849	25.288	NaN	3602.2	30	0	1185.9	0.143			+	43175	TETPLRQY	8	55	336.50903351156575	NaN	0	336.5091247558594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TETPLRQY_	REV__CNOT3|p.S667P|1|0.18|ENSG00000088038|chr19:54152961-54152961|T/C|missense_variant	40.5726180659479	1.7418937515398478	3				NaN	NaN	0	NaN	4075	3772	7848
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7862	25.317	NaN	4247.4	30	0	510.7	0.215			+	7723	DLSKERFLR	9	71	582.3302869174288	1162.6460209016575	2	582.330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DLSKERFLR_	REV__ENSG00000116793|ENST00000369604|PHTF1;REV__nc|ENSG00000116793|Q9UMS5-2|PHTF1;REV__PHTF1|p.F546Sfs*2|1|0.17|ENSG00000116793|chr1:113705924-113705924|A/-|frameshift_variant;REV__PHTF1|p.M547Hfs*10|1|0.23|ENSG00000116793|chr1:113705923-113705924|-/A|frameshift_variant	42.396135135203025	0.392153681582562	3				NaN	NaN	0	NaN	4085	3775	7861
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7863	25.321	NaN	5059.2	30	0	1857.9	0.106			+	-1	SALMTILRPK	10	48	382.56198420736644	1144.6641232222994	3	382.561767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_SALM(Oxidation (M))TILRPK_	REV__nc|ENSG00000133318|O95197-6|RTN3	33.921630207806714	0.6028135429846169	3				NaN	NaN	0	NaN	4086	3775	7861
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7864	25.323	NaN	2390.8	30	0	247.25	0.106	+			20775	KHSLASRHR	9	64	364.5449338623213	NaN	0	364.54498291015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KHSLASRHR_	ENST00000343605.4_1_22:31032071-31032353:+|nuORF	26.69291269510374	0.34280015626154364	3				NaN	NaN	0	NaN	4087	3775	7861
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7865	25.325	NaN	1456.8	30	0	223.72	0.037	+			26477	LTLISNFSKI	10	37	568.3406907565454	NaN	0	568.341064453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LTLISNFSKI_	L1PA6_dup546|chr2:49227587-49231532:-|4.547726375381561|0.2927699401366612|3.96|483.0|62|2|sense	28.5767321226876	0.40634399112407993	3				NaN	NaN	0	NaN	4088	3775	7861
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7888	25.377	NaN	1825.4	30	0	309.94	0.214	+			38393	SRVSSDIR	8	47	460.249869588222	918.485186243244	2	460.2500305175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SRVSSDIR_	ENST00000483634.1_1_6:24403304-24412499:+|nuORF;nc|ENSG00000124532|Q9HD23-3|MRS2	58.78195531508484	0.5138399468736706	3				NaN	NaN	0	NaN	4105	3781	7887
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7889	25.381	NaN	2515.2	30	0	360.06	0.106	+			32263	QTLPNAAYNNR	11	43	631.3195093920968	NaN	0	631.3189697265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QTLPNAAYNNR_	ENSG00000102837|ENST00000219022|OLFM4	36.446750945000026	0.40298828388271424	3				NaN	NaN	0	NaN	4106	3781	7887
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7890	25.383	NaN	1380.7	30	0	236.48	0.034	+			28731	NNRSLDLD	8	51	473.73314958840774	945.4517462436155	2	473.7338562011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NNRSLDLD_	CON__P04264;CON__P12035;CON__P50446;CON__Q5XQN5;CON__Q6IFZ6;CON__Q7Z794;CON__Q8BGZ7;CON__Q922U2;ENSG00000167768|ENST00000252244|KRT1;ENSG00000186442|ENST00000417996|KRT3;ENSG00000189182|ENST00000341809|KRT77	49.44154591367651	0.597725784090933	3				NaN	NaN	0	NaN	4107	3781	7887
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7901	25.406	NaN	548.58	30	0	85.441	0.142	+			17386	IANIPLPLG	9	32	454.28430376049124	906.5540545877825	2	454.28387451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IANIPLPLG_	ENSG00000018625|ENST00000361216|ATP1A2;ENSG00000163399|ENST00000295598|ATP1A1;ENST00000472488.5_1_1:160085570-160106822:+|nuORF;nc|ENSG00000163399|P05023-3|ATP1A1;nc|ENSG00000163399|P05023-4|ATP1A1	42.47446043378293	0.39123495718708534	3				NaN	NaN	0	NaN	4115	3784	7900
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7912	25.433	NaN	1889	30	0	312.24	0.214			+	30925	QELIKEKL	8	54	500.80510257076736	999.5956522083347	2	500.8052978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QELIKEKL_	REV__ENST00000472469.5_2_3:59032898-59035347:-|nuORF	104.0567914643314	0.248440647781298	3				NaN	NaN	0	NaN	4123	3787	7911
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7913	25.437	NaN	2313.8	30	0	498.99	0.038				-1	MYNGVNSYSR	10	55	603.7635767241844	1205.5126005151687	2	603.7645263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_M(Oxidation (M))YNGVNSYSR_	tr|U7SWV5|U7SWV5_FUSNUBD-FAE-likedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01186PE=4SV=1	23.52269567125451	0.6877354443478558	3				NaN	NaN	0	NaN	4124	3787	7911
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7940	25.504	NaN	1898.6	30	0	286.35	0.214				-1	IMALMNIIV	9	54	350.529616225646	1048.5670192771381	3	350.5292663574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_IM(Oxidation (M))ALM(Oxidation (M))NIIV_	tr|U7T5Z3|U7T5Z3_FUSNUAGCSfamilyalanineorglycine:cationsymporterOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00139PE=3SV=1	35.61828744233558	0.47037581924408073	3				NaN	NaN	0	NaN	4142	3796	7939
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7941	25.507	NaN	1281.9	30	0	121.73	0.106			+	2131	ALISVKLEQ	9	44	334.2063264394788	NaN	0	334.20635986328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ALISVKLEQ_	REV__ENSG00000173064|ENST00000682272|HECTD4;REV__ENST00000311694.7_1_12:112687934-112711582:-|nuORF;REV__HECTD4|p.A3108Gfs*4|1|0.12|ENSG00000173064|chr12:112185242-112185243|CC/-|frameshift_variant;REV__HECTD4|p.A3108Rfs*26|1|0.37|ENSG00000173064|chr12:112185242-112185242|C/-|frameshift_variant;REV__HECTD4|p.A4187Pfs*44|1|0.07|ENSG00000173064|chr12:112163201-112163201|C/-|frameshift_variant;REV__HECTD4|p.L1880Pfs*22|1|0.19|ENSG00000173064|chr12:112231674-112231675|-/TAGGA|frameshift_variant;REV__nc|ENSG00000173064|Q9Y4D8-2|HECTD4;REV__nc|ENSG00000173064|Q9Y4D8-3|HECTD4;REV__nc|ENSG00000173064|Q9Y4D8-5|HECTD4;REV__nc|ENSG00000173064|Q9Y4D8|HECTD4	45.9519527083369	0.2345902329052062	3				NaN	NaN	0	NaN	4143	3796	7939
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7942	25.509	NaN	1143.6	30	0	159.61	0.036			+	47153	VLRWFDGVT	9	31	546.7933959960938	NaN	0	546.7933959960938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VLRWFDGVT_	REV__ENSG00000080031|ENST00000376350|PTPRH;REV__nc|ENSG00000080031|Q9HD43-2|PTPRH;REV__nc|ENSG00000080031|Q9HD43-3|PTPRH	20.94693142431847	0.3660861156085067	3				NaN	NaN	0	NaN	4144	3796	7939
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7954	25.535	NaN	5463.7	30	0	878.89	0.214	+			27723	MQLGVHYSK	9	66	531.7736569042409	1061.5327608752816	2	531.7737426757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MQLGVHYSK_	ENST00000430246.6_1_14:21731784-21731862:-|nuORF;ENST00000554969.5_1_14:21731484-21731862:-|nuORF	106.68306549817024	0.032382560583716295	3				NaN	NaN	0	NaN	4153	3799	7953
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7955	25.539	NaN	1820.4	30	0	202.25	0.106	+			41532	SVQAALKLK	9	49	479.3078611340677	956.6011693349354	2	479.3080749511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVQAALKLK_	ENSG00000160679|ENST00000368694|CHTOP;nc|ENSG00000160679|Q9Y3Y2-3|CHTOP;nc|ENSG00000160679|Q9Y3Y2-4|CHTOP	68.84614121027924	0.14577793175421136	3				NaN	NaN	0	NaN	4154	3799	7953
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7956	25.541	NaN	3082.1	30	0	797	0.039			+	-1	GCWSFIPHINS	11	46	659.3065510371666	1316.5985491411332	2	659.3067626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_GC(Carbamidomethyl (C))WSFIPHINS_	REV__ENSG00000134901|ENST00000376004|POGLUT2;REV__ENST00000460338.5_1_13:103443606-103451020:-|nuORF	36.446750945000026	0.6065623449959539	3				NaN	NaN	0	NaN	4155	3799	7953
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7968	25.567	NaN	2200.4	30	0	390.24	0.143	+			3166	ASIPHVIAR	9	49	321.8627835983005	962.5665213951015	3	321.86279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASIPHVIAR_	ACTR8|p.S259Qfs*18|1|0.38|ENSG00000113812|chr3:53876623-53876623|A/-|frameshift_variant;ENSG00000113812|ENST00000335754|ACTR8	26.69291269510374	0.5537881896960711	3				NaN	NaN	0	NaN	4164	3802	7967
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7979	25.594	NaN	2535.7	30	0	326.83	0.214	+			7905	DSALLLLQK	9	68	500.80510257076736	999.5956522083347	2	501.3031311035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DSALLLLQK_	ENSG00000078898|ENST00000170150|BPIFB2	63.30626980617807	0.18605348971131092	3				NaN	NaN	0	NaN	4172	3805	7978
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7980	25.597	NaN	3323	30	0	622.49	0.035	+			43141	TESKTVIKV	9	58	335.5378862796605	1003.5918294391815	3	335.53778076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TESKTVIKV_	BPTF|p.D2844Afs*20|1|0.08|ENSG00000171634|chr17:67959766-67959767|-/C|frameshift_variant;BPTF|p.K2718Nfs*36|3|0.12|ENSG00000171634|chr17:67948150-67948150|A/-|frameshift_variant;ENSG00000171634|ENST00000306378|BPTF;nc|ENSG00000171634|Q12830-4|BPTF;nc|ENSG00000171634|Q12830|BPTF	67.49366992349736	0.1516260258713357	3				NaN	NaN	0	NaN	4173	3805	7978
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7994	25.626	NaN	22844	30	0	2363.2	0.214	+			11456	FNDPNAKEM	9	81	533.2371420580813	1064.4597311829625	2	533.2374267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FNDPNAKEM_	ENSG00000056097|ENST00000265069|ZFR	168.25843898104137	0.0030641937004078144	3				NaN	NaN	0	NaN	4184	3808	7993
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7995	25.63	NaN	1618.6	30	0	510.86	0.106			+	8033	DTTRHKPAM	9	45	536.7616805273658	1071.5088081215315	2	536.76123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_DTTRHKPAM(Oxidation (M))_	REV__ENST00000475962.5_1_22:39516350-39545814:-|nuORF	40.77816245573522	0.41113185337114944	3				NaN	NaN	0	NaN	4185	3808	7993
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	7996	25.632	NaN	1580.6	30	0	177.74	0.038				-1	VVCMYYTAVF	10	35	606.2793841871069	NaN	0	606.280029296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_VVCM(Oxidation (M))YYTAVF_	ENSG00000256574|ENST00000553795|OR13A1	21.9598887501803	0.4201028297492154	3				NaN	NaN	0	NaN	4186	3808	7993
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8010	25.662	NaN	18271	30	0	4548.1	0.214	+			1806	AIFQGKLEK	9	72	517.3056680580618	1032.5967831829234	2	517.3058471679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AIFQGKLEK_	ENSG00000118322|ENST00000327245|ATP10B	155.5846463517096	0.005567437401040498	3				NaN	NaN	0	NaN	4197	3811	8009
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8011	25.665	NaN	2622.2	30	0	330.31	0.106			+	45835	VAKLNDSSLL	10	54	530.3062877295641	1058.5980225259282	2	530.3060913085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VAKLNDSSLL_	REV__tr|U7SJJ5|U7SJJ5_FUSNUAminobenzoyl-glutamatetransporterOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02072PE=4SV=1	32.81241826257853	0.6118718159329168	3				NaN	NaN	0	NaN	4198	3811	8009
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8012	25.667	NaN	2076.7	30	0	627.61	0.106	+			51548	YYDTHTNTY	9	51	589.2435436021345	1176.472534271069	2	589.2432861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YYDTHTNTY_	ENSG00000064651|ENST00000262461|SLC12A2;nc|ENSG00000064651|P55011-3|SLC12A2;SLC12A2|p.E1119Rfs*7|1|0.47|ENSG00000064651|chr5:128184417-128184418|-/A|frameshift_variant;SLC12A2|p.F466Lfs*59|1|0.11|ENSG00000064651|chr5:128135793-128135793|T/-|frameshift_variant;SLC12A2|p.P1171Sfs*18|1|0.38|ENSG00000064651|chr5:128186498-128186499|-/TC|frameshift_variant	101.25262130126117	0.03792372629710479	3				NaN	NaN	0	NaN	4199	3811	8009
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8013	25.669	NaN	4578	30	0	381.1	0.106	+			50222	WNLYHYYKQFF	11	75	804.8828314655956	1607.751109997991	2	804.885009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_WNLYHYYKQFF_	ENSG00000112159|ENST00000369393|MDN1;MDN1|p.L4077Cfs*15|1|0.16|ENSG00000112159|chr6:89680625-89680625|G/-|frameshift_variant;MDN1|p.L5278Ffs*6|1|0.18|ENSG00000112159|chr6:89652273-89652274|-/A|frameshift_variant	14.864876125193954	0.8008860636109596	3				NaN	NaN	0	NaN	4200	3811	8009
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8014	25.671	NaN	975.95	30	0	81.706	0.106				-1	NNSTCDHVT	9	40	363.8130187988281	NaN	0	363.8130187988281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))NNSTC(Carbamidomethyl (C))DHVT_	ENSG00000157890|ENST00000395614|MEGF11;ENST00000478590.1_1_15:66206003-66207886:-|nuORF;ENST00000490495.5_1_15:66202139-66208942:-|nuORF;nc|ENSG00000157890|A6BM72-2|MEGF11;nc|ENSG00000157890|A6BM72|MEGF11	16.71738777980365	0.38040106172814914	3				NaN	NaN	0	NaN	4201	3811	8009
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8015	25.673	NaN	1466.9	30	0	160.46	0.037			+	-1	LPMKFKPMK	9	45	379.21677100453365	NaN	0	379.216796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_LPM(Oxidation (M))KFKPMK_	REV__AHNAK2|p.D1643Tfs*9|1|0.12|ENSG00000185567|chr14:104950524-104950524|C/-|frameshift_variant;REV__AHNAK2|p.D4448Gfs*6|1|0.2|ENSG00000185567|chr14:104942108-104942109|-/C|frameshift_variant;REV__AHNAK2|p.D983Tfs*9|1|0.16|ENSG00000185567|chr14:104952504-104952504|C/-|frameshift_variant;REV__AHNAK2|p.E5149Gfs*8|1|0.32|ENSG00000185567|chr14:104940005-104940006|-/C|frameshift_variant;REV__AHNAK2|p.E5446Gfs*7|1|0.32|ENSG00000185567|chr14:104939114-104939115|-/C|frameshift_variant;REV__AHNAK2|p.L4206Cfs*19|1|0.12|ENSG00000185567|chr14:104942835-104942835|G/-|frameshift_variant;REV__AHNAK2|p.P2536Lfs*14|1|0.11|ENSG00000185567|chr14:104947844-104947844|G/-|frameshift_variant;REV__ENSG00000185567|ENST00000333244|AHNAK2;REV__nc|ENSG00000185567|Q8IVF2-3|AHNAK2	25.57405402267927	0.3484490411150625	3				NaN	NaN	0	NaN	4202	3811	8009
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8041	25.731	NaN	3099.5	30	0	1016.9	0.214	+			2062	ALALVEVYR	9	41	345.20644711459454	1032.5975119439836	3	345.2060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ALALVEVYR_	ENSG00000167037|ENST00000400358|SGSM1;ENST00000473458.5_1_22:25240737-25320238:+|nuORF;ENST00000480523.1_1_22:25240737-25320238:+|nuORF;nc|ENSG00000167037|Q2NKQ1-3|SGSM1;nc|ENSG00000167037|Q2NKQ1|SGSM1	27.882242232435846	0.5426732730940306	3				NaN	NaN	0	NaN	4222	3817	8040
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8042	25.734	NaN	3565.5	30	0	942.04	0.106	+			5790	AVGVPIKVK	9	51	455.8080786251299	909.6016043170598	2	455.807373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVGVPIKVK_	ENSG00000129003|ENST00000644861|VPS13C;nc|ENSG00000129003|Q709C8-2|VPS13C;nc|ENSG00000129003|Q709C8-3|VPS13C;nc|ENSG00000129003|Q709C8-4|VPS13C;VPS13C|p.E2463Nfs*18|1|0.25|ENSG00000129003|chr15:61920157-61920157|C/-|frameshift_variant;VPS13C|p.N3163Sfs*6|1|0.05|ENSG00000129003|chr15:61882732-61882733|-/TTATCATCAC|frameshift_variant;VPS13C|p.P3597Lfs*3|1|0.26|ENSG00000129003|chr15:61868732-61868732|G/-|frameshift_variant	85.35947970620816	0.07794846947388434	3				NaN	NaN	0	NaN	4223	3817	8040
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8043	25.736	NaN	1542.4	30	0	130.84	0.106	+			51614	YYVLPKKP	8	63	336.53438080198197	NaN	0	336.5345458984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YYVLPKKP_	BLM|p.G1220Pfs*25|1|0.09|ENSG00000197299|chr15:90804264-90804265|-/ACCTTTA|frameshift_variant;BLM|p.K1217Nfs*62|2|0.42|ENSG00000197299|chr15:90804254-90804254|A/-|frameshift_variant;ENSG00000197299|ENST00000355112|BLM	25.450171626174864	1.7418937515398478	3				NaN	NaN	0	NaN	4224	3817	8040
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8044	25.738	NaN	1161.9	30	0	236.17	0.037			+	50122	WHSWTGTTR	9	24	566.2674458022611	NaN	0	566.2676391601562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_WHSWTGTTR_	REV__ENST00000599599.5_2_19:57125204-57132656:+|nuORF	15.641811463095205	0.38404136392510424	3				NaN	NaN	0	NaN	4225	3817	8040
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8057	25.766	NaN	5375.5	30	0	2917.7	0.214	+			12151	GAIKVFVNK	9	56	325.8711849489497	974.5917254470492	3	325.870849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GAIKVFVNK_	ENSG00000131725|ENST00000254029|WDR44;nc|ENSG00000131725|Q5JSH3-2|WDR44;nc|ENSG00000131725|Q5JSH3-4|WDR44;WDR44|p.F898L|1|0.26|ENSG00000131725|chrX:118448939-118448939|C/A|missense_variant	45.9519527083369	0.35044536499095585	3				NaN	NaN	0	NaN	4235	3820	8056
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8058	25.769	NaN	6959.5	30	0	2020.3	0.106			+	-1	VCLCLPLLV	9	59	343.86647359235315	1028.5775913772595	3	343.86614990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_VC(Carbamidomethyl (C))LCLPLLV_	REV__ENSG00000164930|ENST00000358755|FZD6;REV__ENST00000521195.1_1_8:104320096-104343734:+|nuORF;REV__nc|ENSG00000164930|O60353-2|FZD6	21.9598887501803	0.5980208138527809	3				NaN	NaN	0	NaN	4236	3820	8056
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8059	25.771	NaN	2979.3	30	0	668.3	0.106			+	46041	VCARLETVAEL	11	45	630.832275390625	NaN	0	630.832275390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_VC(Carbamidomethyl (C))ARLETVAEL_	REV__ENST00000246229.4_1_20:30790010-30790079:-|nuORF	42.86426827375447	0.36657022113551535	3				NaN	NaN	0	NaN	4237	3820	8056
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8060	25.773	NaN	735.4	30	0	148.53	0.106	+			30409	PVVHLAVL	8	28	424.2738342285156	NaN	0	424.2738342285156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PVVHLAVL_	ENST00000470902.5_1_9:130911720-130912803:+|nuORF	16.704963439144045	1.7418937515398478	3				NaN	NaN	0	NaN	4238	3820	8056
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8061	25.775	NaN	3641.8	30	0	335.65	0.106				-1	 	0	74	625.3476701884181	624.340393721818	1	625.3488159179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4239	3820	8056
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8062	25.777	NaN	2712.7	30	0	312.88	0.038	+			5898	AVLDEAKNINK	11	58	607.8397216796875	NaN	0	607.8397216796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AVLDEAKNINK_	ENSG00000155980|ENST00000455537|KIF5A;ENSG00000168280|ENST00000435030|KIF5C;ENSG00000170759|ENST00000302418|KIF5B;KIF5B|p.M622Wfs*8|1|0.15|ENSG00000170759|chr10:32022898-32022898|T/-|frameshift_variant;KIF5C|p.S816Vfs*68|1|0.35|ENSG00000168280|chr2:149005459-149005459|A/-|frameshift_variant;nc|ENSG00000168280|O60282-2|KIF5C	40.05817265558897	0.3867246477658885	3				NaN	NaN	0	NaN	4240	3820	8056
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8074	25.894	NaN	3802	30	0	1123.4	0.213	+			39705	STIPPELVKQK	11	50	620.3694855677239	NaN	0	620.3692016601562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STIPPELVKQK_	ENSG00000058729|ENST00000283109|RIOK2	55.721020083383095	0.2739492330573669	3				NaN	NaN	0	NaN	4249	3823	8073
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8075	25.897	NaN	1474.3	30	0	175.22	0.106	+			43076	TELTTKSSL	9	45	490.2692708093666	978.5239886855333	2	490.26885986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TELTTKSSL_	ENSG00000133606|ENST00000255977|MKRN1;ENST00000475010.5_1_7:140155450-140179030:-|nuORF;nc|ENSG00000133606|Q9UHC7-2|MKRN1;nc|ENSG00000133606|Q9UHC7-3|MKRN1;nc|ENSG00000133606|Q9UHC7-4|MKRN1;nc|ENSG00000238222|Q13434|MKRN4P	44.377184641726394	0.36891676396732553	3				NaN	NaN	0	NaN	4250	3823	8073
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8076	25.899	NaN	1644	30	0	312.46	0.106	+			1838	AIITPPPAK	9	41	454.28430376049124	906.5540545877825	2	454.2841491699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AIITPPPAK_	ENSG00000113648|ENST00000511689|MACROH2A1;ENST00000360597.8_1_5:134681666-134724783:-|nuORF;ENST00000506532.5_1_5:134705062-134724783:-|nuORF;ENST00000513210.5_1_5:134695623-134724711:-|nuORF;nc|ENSG00000113648|O75367-3|MACROH2A1;nc|ENSG00000113648|O75367|MACROH2A1	58.78195531508484	0.22376836668196862	3				NaN	NaN	0	NaN	4251	3823	8073
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8077	25.901	NaN	858.1	30	0	121.1	0.106	+			29365	PADPTRAASI	10	37	499.7674865722656	NaN	0	499.7674865722656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PADPTRAASI_	ENST00000337975.5_1_15:86303082-86303469:-|nuORF	19.996771675451527	0.4201028297492154	3				NaN	NaN	0	NaN	4252	3823	8073
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8078	25.903	NaN	1232.5	30	0	198.6	0.036			+	44244	TRVTKEHVK	9	49	549.3234252929688	NaN	0	549.3234252929688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TRVTKEHVK_	REV__ENSG00000138823|ENST00000265517|MTTP	31.529811441608018	0.3183796599642538	3				NaN	NaN	0	NaN	4253	3823	8073
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8096	25.94	NaN	2845.8	30	0	390.19	0.214			+	44183	TQTQQHAI	8	43	463.7383307038949	925.4621084745899	2	463.7377624511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TQTQQHAI_	REV__ENST00000588129.6_2_19:52366325-52366472:-|nuORF	35.200714571348534	0.6875396545722289	3				NaN	NaN	0	NaN	4268	3826	8095
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8097	25.943	NaN	1804.3	30	0	531.32	0.106			+	48000	VSQGTVGVLV	10	40	479.78129347949783	957.5480340257957	2	479.7817687988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSQGTVGVLV_	REV__ENSG00000166762|ENST00000396879|CATSPER2;REV__ENST00000469461.5_1_15:43927692-43940259:-|nuORF;REV__nc|ENSG00000166762|Q96P56-2|CATSPER2;REV__nc|ENSG00000166762|Q96P56-3|CATSPER2	27.882242232435846	0.6521336255503853	3				NaN	NaN	0	NaN	4269	3826	8095
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8098	25.945	NaN	1263.5	30	0	288.84	0.037			+	21452	KNFKAQIEL	9	36	364.2129927915166	NaN	0	364.21246337890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KNFKAQIEL_	REV__ENSG00000103540|ENST00000694978|CCP110;REV__nc|ENSG00000103540|O43303|CCP110	27.882242232435846	0.3367954786602879	3				NaN	NaN	0	NaN	4270	3826	8095
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8111	25.973	NaN	6981.1	30	0	4206.9	0.214	+			18159	ILQASLKLTL	10	55	367.2413015548491	1098.7020752647472	3	367.240966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ILQASLKLTL_	ENST00000397195.9_1_17:2588550-2588628:+|nuORF	14.864876125193954	0.7409144161711139	3				NaN	NaN	0	NaN	4280	3829	8110
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8112	25.977	NaN	1749.6	30	0	249.26	0.106	+			32711	RAKTPVTLKQ	10	53	571.3563405070374	1140.6981280808748	2	571.3557739257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RAKTPVTLKQ_	ENSG00000120802|ENST00000556029|TMPO;nc|ENSG00000120802|P42167-2|TMPO;nc|ENSG00000120802|P42167-3|TMPO;TMPO|p.L427Cfs*13|1|0.4|ENSG00000120802|chr12:98547767-98547767|T/-|frameshift_variant;TMPO|p.L427Ffs*18|1|0.28|ENSG00000120802|chr12:98547766-98547767|-/T|frameshift_variant;TMPO|p.R409Tfs*36|1|0.06|ENSG00000120802|chr12:98547707-98547708|-/A|frameshift_variant	35.15202426646627	0.5927656479315102	3				NaN	NaN	0	NaN	4281	3829	8110
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8113	25.979	NaN	1525.6	30	0	260.6	0.036			+	41875	SVTIIYHTR	9	40	545.306640625	NaN	0	545.306640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVTIIYHTR_	REV__sp|Q6SWC8|UL01_HCMVMGlycoproteinUL1OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL1PE=3SV=1	34.172542307311794	0.30503706118289736	3				NaN	NaN	0	NaN	4282	3829	8110
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8134	26.03	NaN	1636.9	30	0	247.21	0.214	+			23455	LAEAHSNPL	9	44	476.2483495302025	950.482146127205	2	476.2480163574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LAEAHSNPL_	ENST00000378339.6_1_5:137781719-137782058:+|nuORF	37.81151784470057	0.4459294069877048	3				NaN	NaN	0	NaN	4297	3835	8133
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8135	26.034	NaN	962.09	30	0	313.55	0.106				-1	 	0	30	442.26688698319333	882.5192210331867	2	442.266357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4298	3835	8133
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8136	26.036	NaN	1258.2	30	0	168.71	0.036			+	18352	IQNCLILNQ	9	41	529.7854411794989	1057.5563294257977	2	530.2888793945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IQNCLILNQ_	REV__MAST1|p.R413C|1|0.28|ENSG00000105613|chr19:12858610-12858610|C/T|missense_variant	44.116797842482775	0.37197099687881774	3				NaN	NaN	0	NaN	4299	3835	8133
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8147	26.061	NaN	2661.1	30	0	317.42	0.214	+			19181	IYTKLNQKI	9	61	560.8398933036012	1119.6652336740024	2	560.8394775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IYTKLNQKI_	ENSG00000138190|ENST00000260762|EXOC6;EXOC6|p.L640Ffs*39|1|0.37|ENSG00000138190|chr10:92974192-92974193|-/T|frameshift_variant;nc|ENSG00000138190|Q8TAG9-2|EXOC6	83.6470233535746	0.08277643980271215	3				NaN	NaN	0	NaN	4307	3838	8146
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8148	26.065	NaN	2034.9	30	0	225.23	0.036	+			48166	VSYVRKVLQ	9	63	546.3325903991997	1090.6506278651993	2	546.3324584960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSYVRKVLQ_	ENSG00000164961|ENST00000318410|WASHC5	65.46538089061403	0.16805504838372562	3				NaN	NaN	0	NaN	4308	3838	8146
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8161	26.092	NaN	4122.4	30	0	634.3	0.211				-1	QLQKYMECES	10	62	666.2828984320928	1330.5512439309855	2	666.2838134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_QLQKYM(Oxidation (M))EC(Carbamidomethyl (C))ES_	ENST00000548479.1_1_12:56325089-56330479:+|nuORF;ENST00000551296.5_1_12:56330167-56330479:+|nuORF	32.81241826257853	0.6118718159329168	3				NaN	NaN	0	NaN	4318	3841	8160
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8162	26.095	NaN	1335.7	30	0	136.08	0.035			+	28004	MVVQPFPRG	9	47	515.7792927717571	1029.5440326103142	2	515.7792358398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MVVQPFPRG_	REV__ENST00000398050.3_1_10:127355985-127356390:-|nuORF	38.80614096846853	0.43426287593479557	3				NaN	NaN	0	NaN	4319	3841	8160
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8173	26.119	NaN	1865.6	30	0	490.28	0.214				-1	TNLEQMMKAG	10	39	577.7626362678717	1153.5107196025433	2	577.7623901367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_TNLEQM(Oxidation (M))M(Oxidation (M))KAG_	ENSG00000188782|ENST00000456354|CATSPER4;nc|ENSG00000188782|Q7RTX7-2|CATSPER4	28.081489160057373	0.6505064946289502	3				NaN	NaN	0	NaN	4327	3844	8172
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8174	26.123	NaN	1738	30	0	479.33	0.106				-1	GSCIAMINQ	9	53	497.22768122826346	NaN	0	497.2273254394531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GSC(Carbamidomethyl (C))IAMINQ_	ENST00000472616.1_1_7:139790896-139796717:-|nuORF	68.78682469695295	0.1118430353446351	3				NaN	NaN	0	NaN	4328	3844	8172
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8175	26.125	NaN	1215.8	30	0	87.237	0.106			+	37762	SLVMMTTAK	9	48	491.25756330451884	NaN	0	491.2575988769531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLVMMTTAK_	REV__ENSG00000137513|ENST00000281038|NARS2;REV__nc|ENSG00000137513|Q96I59-2|NARS2	27.882242232435846	0.3367954786602879	3				NaN	NaN	0	NaN	4329	3844	8172
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8176	26.127	NaN	3173.4	30	0	420.28	0.036	+			28353	NEKETMQSL	9	61	540.255813964352	1078.497074995504	2	540.2555541992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NEKETMQSL_	CON__Q497I4;CON__Q92764;ENSG00000111057|ENST00000388835|KRT18;ENSG00000197079|ENST00000246639|KRT35;ENST00000402024.2_1_6:116779363-116779789:-|nuORF;ENST00000520711.1_1_8:41368829-41369321:+|nuORF;ENST00000549078.5_1_12:53342924-53344195:+|nuORF;ENST00000577198.5_1_17:26603697-26633156:-|nuORF;ENST00000585825.1_1_17:58887571-58888051:+|nuORF	117.5257442709337	0.022697614825424036	3				NaN	NaN	0	NaN	4330	3844	8172
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8187	26.152	NaN	1653.2	30	0	220.12	0.214				-1	VCPICQVPI	9	45	514.7669653595522	NaN	0	514.7670288085938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_VC(Carbamidomethyl (C))PICQVPI_	ENSG00000124201|ENST00000396105|ZNFX1	30.503639358989545	0.3235605894931338	3				NaN	NaN	0	NaN	4338	3847	8186
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8188	26.156	NaN	2552.8	30	0	690.36	0.032	+			14555	GTFGGLGSK	9	35	412.219310200837	822.424067468474	2	412.2186584472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTFGGLGSK_	ENSG00000124942|ENST00000378024|AHNAK	90.60085204095205	0.06317133949006545	3				NaN	NaN	0	NaN	4339	3847	8186
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8200	26.181	NaN	1568.5	30	0	380.6	0.214	+			15340	GTVKVVVVDS	10	49	334.8660168114219	1001.5762210344658	3	334.86572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTVKVVVVDS_	ENSG00000185379|ENST00000345365|RAD51D;nc|ENSG00000185379|O75771-3|RAD51D;nc|ENSG00000185379|O75771-4|RAD51D;nc|ENSG00000185379|O75771-5|RAD51D;nc|ENSG00000185379|O75771-8|RAD51D;RAD51D|p.G242Wfs*85|1|0.3|ENSG00000185379|chr17:35103268-35103269|-/A|frameshift_variant	20.94693142431847	0.7087701759873708	3				NaN	NaN	0	NaN	4348	3850	8199
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8201	26.185	NaN	2017.5	30	0	249.04	0.106	+			14586	GTFVGVHVR	9	47	486.2748471268871	970.5351413205742	2	486.27471923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTFVGVHVR_	ENSG00000176920|ENST00000425340|FUT2	56.72105179125745	0.24094814563026265	3				NaN	NaN	0	NaN	4349	3850	8199
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8202	26.187	NaN	1843.8	30	0	383.42	0.106	+			23469	LAELPLPSPR	10	47	546.8251511391995	1091.635749345199	2	546.82373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LAELPLPSPR_	ENST00000469172.5_1_10:70091245-70091596:+|nuORF	43.650786325866115	0.5155049133366767	3				NaN	NaN	0	NaN	4350	3850	8199
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8203	26.189	NaN	1401.9	30	0	276.76	0.034	+			15625	GVLDLSTKK	9	47	480.7897540024165	959.564955071633	2	480.78900146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GVLDLSTKK_	ENSG00000178177|ENST00000635767|LCORL;ENSG00000196233|ENST00000421806|LCOR;nc|ENSG00000178177|Q8N3X6-3|LCORL;nc|ENSG00000178177|Q8N3X6|LCORL;nc|ENSG00000196233|Q96JN0-2|LCOR;nc|ENSG00000196233|Q96JN0|LCOR	47.657333605630114	0.33044192980041115	3				NaN	NaN	0	NaN	4351	3850	8199
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8227	26.243	NaN	1946.9	30	0	188.57	0.214			+	23585	LALVLLHE	8	46	454.28430376049124	906.5540545877825	2	454.28411865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LALVLLHE_	REV__ENSG00000249437|ENST00000517649|NAIP;REV__ENST00000315147.8_1_5:70265933-70281744:-|nuORF;REV__ENST00000511830.2_1_5:69390488-69422514:-|nuORF;REV__ENST00000512908.2_1_5:70398727-70422449:-|nuORF;REV__nc|ENSG00000249437|Q13075-2|NAIP	44.53106598305862	0.628196326904373	3				NaN	NaN	0	NaN	4369	3856	8226
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8228	26.246	NaN	2349	30	0	648.6	0.106			+	25297	LPADSPPPVRS	11	43	379.20832491111116	1134.6031453335336	3	379.2080383300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LPADSPPPVRS_	REV__ENSG00000223953|ENST00000528368|C1QTNF5	25.57405402267927	0.7215402271931856	3				NaN	NaN	0	NaN	4370	3856	8226
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8229	26.248	NaN	2476.2	30	0	359.57	0.036	+			36849	SIFGGTDMKK	10	50	542.278999722361	1082.543446511522	2	542.27978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SIFGGTDMKK_	ENSG00000100297|ENST00000216122|MCM5;ENST00000493076.5_1_22:35806581-35817581:+|nuORF	51.52775601994872	0.4429225830406686	3				NaN	NaN	0	NaN	4371	3856	8226
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8246	26.283	NaN	1574.4	30	0	241.38	0.215				-1	 	0	39	569.2760103304494	568.2687338638493	1	569.2756958007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4385	3859	8245
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8247	26.287	NaN	3409.7	30	0	326.33	0.106	+			24194	LEQKVASLEL	10	56	565.3274847122844	1128.6404164913688	2	565.3273315429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LEQKVASLEL_	ENSG00000131018|ENST00000367255|SYNE1;ENST00000490135.6_1_6:152637953-152655276:-|nuORF;nc|ENSG00000131018|Q8NF91-4|SYNE1;nc|ENSG00000131018|Q8NF91-7|SYNE1;SYNE1|p.E5862Gfs*83|1|0.12|ENSG00000131018|chr6:152300729-152300738|CCAGACTCCT/-|frameshift_variant;SYNE1|p.G6773Wfs*7|1|0.44|ENSG00000131018|chr6:152236186-152236187|-/A|frameshift_variant;SYNE1|p.K6871Rfs*22|2|0.52|ENSG00000131018|chr6:152233881-152233881|T/-|frameshift_variant;SYNE1|p.L8283Pfs*8|1|0.19|ENSG00000131018|chr6:152148173-152148174|-/G|frameshift_variant;SYNE1|p.M5602Nfs*13|2|0.32|ENSG00000131018|chr6:152310779-152310780|-/T|frameshift_variant;SYNE1|p.V8635Sfs*12|1|0.15|ENSG00000131018|chr6:152133375-152133375|T/-|frameshift_variant	106.68306549817024	0.05784995512091477	3				NaN	NaN	0	NaN	4386	3859	8245
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8248	26.289	NaN	2332.5	30	0	233.36	0.036			+	-1	MQEAQLGSSV	10	53	533.2470090738358	1064.4794652144715	2	533.2521362304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))QEAQLGSSV_	REV__ENST00000469753.5_1_2:46300785-46301094:+|nuORF	42.33807565288922	0.5276008846745733	3				NaN	NaN	0	NaN	4387	3859	8245
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8263	26.32	NaN	2307.7	30	0	774.53	0.214	+			2219	ALRLTHESL	9	49	347.2015517715289	NaN	0	347.20013427734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ALRLTHESL_	ENSG00000125089|ENST00000245105|SH3TC1;ENST00000506360.5_1_4:8207046-8220006:+|nuORF;ENST00000512100.5_1_4:8211452-8220050:+|nuORF;ENST00000515682.5_1_4:8207046-8242679:+|nuORF	37.15910966729921	0.2899585034171616	3				NaN	NaN	0	NaN	4399	3862	8262
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8264	26.323	NaN	4271.8	30	0	594.45	0.106	+			14077	GSLDQVLKK	9	67	494.296084580968	986.577616228736	2	494.2958068847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSLDQVLKK_	ENSG00000169032|ENST00000307102|MAP2K1;ENST00000425818.2_1_15:66679685-66737158:+|nuORF;MAP2K1|p.A284Gfs*2|1|0.06|ENSG00000169032|chr15:66485144-66485145|-/T|frameshift_variant	120.8684288430529	0.02067403653475984	3				NaN	NaN	0	NaN	4400	3862	8262
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8265	26.325	NaN	1119.8	30	0	317.68	0.106			+	-1	VCRPRSFSE	9	37	379.8523864746094	NaN	0	379.8523864746094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_VC(Carbamidomethyl (C))RPRSFSE_	REV__ENST00000376561.7_1_11:70244651-70253450:+|nuORF	26.69291269510374	0.34280015626154364	3				NaN	NaN	0	NaN	4401	3862	8262
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8266	26.327	NaN	2006.9	30	0	953.33	0.036	+			37597	SLPLVDTHSK	10	43	548.8035565248731	NaN	0	548.8031005859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLPLVDTHSK_	ENSG00000026025|ENST00000544301|VIM;ENST00000487938.5_1_10:17278234-17279267:+|nuORF	33.921630207806714	0.38879399011744475	3				NaN	NaN	0	NaN	4402	3862	8262
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8279	26.355	NaN	1521.4	30	0	211.87	0.144			+	43392	TGGIFLQSNL	10	54	525.2864791795888	1048.5584054259775	2	525.2868041992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TGGIFLQSNL_	REV__ENSG00000106714|ENST00000297668|CNTNAP3;REV__ENSG00000154529|ENST00000377561|CNTNAP3B;REV__ENST00000333554.4_9:40307429-40337427:+|nuORF;REV__ENST00000435173.1_9:65632066-65661969:+|nuORF;REV__ENST00000451450.1_9:40307429-40322734:+|nuORF;REV__nc|ENSG00000283378|Q9BZ76-2|CNTNAP3	56.632244143249146	0.3964695498866976	3				NaN	NaN	0	NaN	4412	3865	8278
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8290	26.38	NaN	1517.5	30	0	502.37	0.214				-1	 	0	33	442.26688698319333	882.5192210331867	2	442.2662658691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4420	3868	8289
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8291	26.384	NaN	1495.4	30	0	219.35	0.106	+			13333	GKNYWIALV	9	38	532.299112361729	NaN	0	532.2999267578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GKNYWIALV_	tr|U7T5S5|U7T5S5_FUSNUCarbonstarvationproteinCstAOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00374PE=3SV=1	26.79610172149135	0.34227917631780574	3				NaN	NaN	0	NaN	4421	3868	8289
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8292	26.386	NaN	2790.7	30	0	391.08	0.039			+	19546	KCGLICYWSVK	11	46	650.3309096229432	1298.6472663126863	2	650.332763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KCGLICYWSVK_	REV__CFAP54|p.Q2612Rfs*5|1|0.32|ENSG00000188596|chr12:96753887-96753887|T/-|frameshift_variant;REV__ENSG00000188596|ENST00000524981|CFAP54;REV__nc|ENSG00000188596|Q96N23-2|CFAP54	27.047317107675042	0.7060868989289394	3				NaN	NaN	0	NaN	4422	3868	8289
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8316	26.442	NaN	1500.7	30	0	242.93	0.142	+			15567	GVGEVLHVK	9	42	469.2771076663966	936.5396623995932	2	469.2767028808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVGEVLHVK_	ENSG00000213676|ENST00000375203|ATF6B;ENST00000495579.5_1_6:32088425-32095984:-|nuORF;nc|ENSG00000213676|Q99941-2|ATF6B	79.71258880314673	0.09879134589249085	3				NaN	NaN	0	NaN	4440	3874	8315
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8326	26.466	NaN	2234.5	30	0	1301.6	0.214				-1	ALHAAACRVK	10	42	366.20640593632	1095.59738840916	3	366.20611572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_ALHAAAC(Carbamidomethyl (C))RVK_	ENST00000482578.2_1_4:154178737-154191533:+|nuORF	30.317721548370564	0.6322445173429027	3				NaN	NaN	0	NaN	4447	3877	8325
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8327	26.469	NaN	2546.9	30	0	404.66	0.106	+			15635	GVLGGYIQKK	10	61	531.8192547451507	1061.6239565571013	2	531.8203735351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GVLGGYIQKK_	ENSG00000139687|ENST00000267163|RB1;ENST00000525036.1_1_13:48877982-48934322:+|nuORF;RB1|p.L561Mfs*9|1|0.07|ENSG00000139687|chr13:48381428-48381432|CCTTG/-|frameshift_variant;RB1|p.V654Cfs*4|1|0.33|ENSG00000139687|chr13:48456343-48456343|A/-|frameshift_variant;RB1|p.Y529*|1|0.23|ENSG00000139687|chr13:48381334-48381335|AC/-|frameshift_variant;RB1|p.Y529Tfs*3|1|0.08|ENSG00000139687|chr13:48381329-48381329|T/-|frameshift_variant	40.77816245573522	0.5419747034533848	3				NaN	NaN	0	NaN	4448	3877	8325
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8328	26.471	NaN	1034.9	30	0	66.557	0.037	+			44165	TQPSPELRCT	10	44	377.85294467198213	NaN	0	377.85260009765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TQPSPELRCT_	ENST00000585075.1_1_17:73267468-73267714:+|nuORF	26.063383197487333	0.4145965855542893	3				NaN	NaN	0	NaN	4449	3877	8325
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8340	26.497	NaN	839.98	30	0	103.64	0.214	+			18855	IVDQSQQAY	9	37	526.2567548703285	NaN	0	526.2561645507812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IVDQSQQAY_	ENSG00000164924|ENST00000395958|YWHAZ;ENST00000392459.3_1_6:127676988-127677414:+|nuORF;ENST00000440317.1_1_2:127315208-127315727:-|nuORF;ENST00000480304.5_1_8:101936173-101961117:-|nuORF;ENST00000517727.5_1_8:101936341-101962760:-|nuORF;nc|ENSG00000164924|P63104-2|YWHAZ	24.20275056022122	0.35506675290109213	3				NaN	NaN	0	NaN	4458	3880	8339
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8341	26.5	NaN	950.57	30	0	171.25	0.106	+			41991	SVYGYGVQK	9	29	500.75879631732147	999.503039701443	2	500.7577209472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVYGYGVQK_	ENSG00000107164|ENST00000319725|FUBP3;FUBP3|p.P395Lfs*27|2|0.27|ENSG00000107164|chr9:130630689-130630689|C/-|frameshift_variant	29.14955571784316	0.5308295550522326	3				NaN	NaN	0	NaN	4459	3880	8339
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8342	26.502	NaN	1588.5	30	0	173.19	0.037	+			9587	ELKELLQKE	9	53	565.3274847122844	1128.6404164913688	2	565.3300170898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ELKELLQKE_	ENSG00000188015|ENST00000368713|S100A3	56.43379154798735	0.2433427591689151	3				NaN	NaN	0	NaN	4460	3880	8339
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8352	26.524	NaN	2288.5	30	0	198.32	0.143			+	9361	EISQKQSPK	9	61	522.7883731677123	1043.5621934022245	2	522.7886962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EISQKQSPK_	REV__ENSG00000164114|ENST00000311277|MAP9;REV__MAP9|p.D594Rfs*2|1|0.11|ENSG00000164114|chr4:155352637-155352638|-/T|frameshift_variant;REV__MAP9|p.K567Rfs*13|5|0.22|ENSG00000164114|chr4:155352717-155352717|T/-|frameshift_variant	40.05817265558897	0.419577045485086	3				NaN	NaN	0	NaN	4467	3883	8351
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8375	26.579	NaN	2665.1	30	0	873.17	0.214				-1	MLMMMSGGQQ	10	59	573.2269702324337	1144.4393875316673	2	573.2266845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_M(Oxidation (M))LMM(Oxidation (M))MSGGQQ_	ENST00000431051.5_1_2:231951834-231951870:+|nuORF	39.252832667884924	0.5560298534376815	3				NaN	NaN	0	NaN	4484	3889	8374
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8376	26.583	NaN	2324.7	30	0	306.21	0.106	+			29322	NYQNVVHKL	9	57	557.8045322293068	1113.5945115254135	2	557.80322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NYQNVVHKL_	ENSG00000146463|ENST00000314607|ZMYM4;nc|ENSG00000146463|Q5VZL5-2|ZMYM4;nc|ENSG00000146463|Q5VZL5-3|ZMYM4;nc|ENSG00000146463|Q5VZL5-4|ZMYM4;ZMYM4|p.A956Sfs*68|1|0.38|ENSG00000146463|chr1:35393690-35393691|-/A|frameshift_variant;ZMYM4|p.D1229Ifs*2|1|0.12|ENSG00000146463|chr1:35405175-35405175|G/-|frameshift_variant;ZMYM4|p.N1222Kfs*15|1|0.25|ENSG00000146463|chr1:35405154-35405155|-/A|frameshift_variant;ZMYM4|p.Y806Ifs*12|1|0.16|ENSG00000146463|chr1:35389058-35389059|-/A|frameshift_variant	107.00750918261382	0.032051501805654005	3				NaN	NaN	0	NaN	4485	3889	8374
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8377	26.585	NaN	1264	30	0	110.99	0.036			+	51510	YVQSIRKY	8	46	528.7962135477236	NaN	0	528.7962646484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YVQSIRKY_	REV__ENST00000494248.1_1_7:77214868-77230160:+|nuORF	45.9519527083369	1.7418937515398478	3				NaN	NaN	0	NaN	4486	3889	8374
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8388	26.609	NaN	832.24	30	0	60.01	0.142			+	38373	SRSLARRK	8	39	487.30539496086743	NaN	0	487.3055114746094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SRSLARRK_	REV__ENSG00000070047|ENST00000264555|PHRF1;REV__ENST00000532550.1_1_11:601671-606691:+|nuORF;REV__nc|ENSG00000070047|Q9P1Y6-2|PHRF1;REV__nc|ENSG00000070047|Q9P1Y6-3|PHRF1;REV__PHRF1|p.E1225Kfs*62|1|0.36|ENSG00000070047|chr11:609125-609125|G/-|frameshift_variant;REV__PHRF1|p.L1393Cfs*8|1|0.38|ENSG00000070047|chr11:609628-609628|C/-|frameshift_variant;REV__PHRF1|p.P938Qfs*23|2|0.45|ENSG00000070047|chr11:608263-608263|C/-|frameshift_variant;REV__PHRF1|p.T1126Pfs*73|1|0.36|ENSG00000070047|chr11:608827-608827|C/-|frameshift_variant	32.81241826257853	1.7418937515398478	3				NaN	NaN	0	NaN	4494	3892	8387
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8399	26.634	NaN	1767.3	30	0	344.26	0.214			+	10055	ESFCLKLNQL	10	34	398.8781242153292	1193.6125432461877	3	398.8777160644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ESFCLKLNQL_	REV__ENSG00000197056|ENST00000359858|ZMYM1	28.081489160057373	0.6505064946289502	3				NaN	NaN	0	NaN	4502	3895	8398
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8400	26.638	NaN	1798.3	30	0	180.96	0.036	+			22406	KTIVFVETK	9	66	532.8213239879669	1063.6280950427338	2	532.8209838867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTIVFVETK_	DDX5|p.D424Ifs*31|1|0.03|ENSG00000108654|chr17:64500720-64500721|-/AAGCAATTAAT|frameshift_variant;DDX5|p.D572Nfs*6|1|0.04|ENSG00000108654|chr17:64500054-64500055|-/TGACAAGATAGTT|frameshift_variant;DDX5|p.R502Gfs*87|1|0.21|ENSG00000108654|chr17:64500264-64500264|T/-|frameshift_variant;ENSG00000108654|ENST00000225792|DDX5;ENST00000581230.5_1_17:62498125-62502378:-|nuORF;nc|ENSG00000108654|P17844-2|DDX5	61.76455937419982	0.19890525308472518	3				NaN	NaN	0	NaN	4503	3895	8398
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8412	26.663	NaN	67797	30	0	21246	0.214	+			6657	AYVHMVTHF	9	80	374.17968734943497	1119.517232648505	3	374.17950439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_AYVHM(Oxidation (M))VTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	51.33545320467046	0.2872990594074956	3				NaN	NaN	0	NaN	4512	3898	8411
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8413	26.667	NaN	1778	30	0	194.97	0.106	+			6658	AYVHMVTHF	9	57	560.7661377679188	1119.5177226026376	2	560.765869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_AYVHM(Oxidation (M))VTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	76.84663266511073	0.11118375776443899	3				NaN	NaN	0	NaN	4513	3898	8411
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8414	26.669	NaN	1989.6	30	0	308.03	0.106	+			51526	YVVMYMLM	8	44	525.2473478598985	NaN	0	525.2472534179688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YVVMYMLM_	tr|U7SU28|U7SU28_FUSNUGlutamate/gamma-aminobutyrateantiporterOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00994PE=4SV=1	43.626045697637714	1.7418937515398478	3				NaN	NaN	0	NaN	4514	3898	8411
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8415	26.67	NaN	881.39	30	0	231.37	0.036			+	-1	LIFCDGTSY	9	30	538.2396240234375	NaN	0	538.2396240234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_LIFC(Carbamidomethyl (C))DGTSY_	REV__ENSG00000100731|ENST00000304743|PCNX1;REV__ENST00000556516.1_1_14:71517389-71527455:+|nuORF;REV__nc|ENSG00000100731|Q96RV3-4|PCNX1	24.20275056022122	0.35506675290109213	3				NaN	NaN	0	NaN	4515	3898	8411
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8423	26.69	NaN	3200.6	30	0	530.9	0.138				-1	 	0	41	322.1938229068465	642.373092880493	2	322.1934509277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4520	3901	8422
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8431	26.711	NaN	4585.9	30	0	729.45	0.214	+			14858	GTLMWHQMK	9	66	574.2731932746301	1146.53183361606	2	574.2734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_GTLM(Oxidation (M))WHQMK_	ENST00000346169.6_1_3:184032401-184033585:+|nuORF;ENST00000352767.7_2_3:184032446-184033585:+|nuORF	71.87747018426188	0.13267044672804276	3				NaN	NaN	0	NaN	4525	3904	8430
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8432	26.715	NaN	1360	30	0	157.55	0.036			+	1401	AEVSDEKVIQ	10	47	559.2910925252902	1116.5676321173803	2	559.2911987304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEVSDEKVIQ_	REV__ENSG00000105647|ENST00000222254|PIK3R2	44.377184641726394	0.5088115166961078	3				NaN	NaN	0	NaN	4526	3904	8430
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8444	26.74	NaN	1307.4	30	0	272.41	0.214	+			28974	NSHCGAAL	8	45	386.67425287419826	NaN	0	386.6746826171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NSHCGAAL_	ENST00000371250.3_1_1:56961694-56961862:-|nuORF	26.79610172149135	1.7418937515398478	3				NaN	NaN	0	NaN	4535	3907	8443
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8445	26.744	NaN	1097.2	30	0	126.58	0.106				-1	LGVALTTSMC	10	42	534.755126953125	NaN	0	534.755126953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_LGVALTTSM(Oxidation (M))C(Carbamidomethyl (C))_	ENSG00000155974|ENST00000359742|GRIP1;nc|ENSG00000155974|Q9Y3R0-2|GRIP1;nc|ENSG00000155974|Q9Y3R0-3|GRIP1	35.61828744233558	0.3832230071539346	3				NaN	NaN	0	NaN	4536	3907	8443
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8446	26.746	NaN	1691	30	0	196.1	0.036	+			940	AEIQGNINKV	10	56	543.3021072294815	1084.589661525763	2	543.3032836914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEIQGNINKV_	ENSG00000140575|ENST00000268182|IQGAP1;ENSG00000145703|ENST00000274364|IQGAP2;IQGAP1|p.N941Ifs*8|1|0.43|ENSG00000140575|chr15:90476693-90476693|A/-|frameshift_variant;IQGAP1|p.S1529Afs*10|1|0.15|ENSG00000140575|chr15:90492665-90492665|A/-|frameshift_variant;IQGAP2|p.K608Nfs*42|1|0.36|ENSG00000145703|chr5:76637072-76637072|A/-|frameshift_variant;IQGAP2|p.Q1499Rfs*15|1|0.05|ENSG00000145703|chr5:76701201-76701202|-/CCGAG|frameshift_variant;IQGAP2|p.T881Hfs*2|2|0.3|ENSG00000145703|chr5:76665133-76665133|A/-|frameshift_variant	80.45461616416974	0.1919067876629769	3				NaN	NaN	0	NaN	4537	3907	8443
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8458	26.772	NaN	4276.2	30	0	1588.9	0.143	+			14971	GTMTGMLYK	9	53	509.2406209707978	1016.4666890083956	2	509.2406005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_GTMTGM(Oxidation (M))LYK_	ENSG00000178440|ENST00000651763|TIMM23B-AGAP6;ENSG00000204152|ENST00000651259|TIMM23B;ENSG00000265354|ENST00000580018|TIMM23;nc|ENSG00000204152|Q5SRD1-2|TIMM23B	64.20726635412375	0.17854274437659667	3				NaN	NaN	0	NaN	4546	3910	8457
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8469	26.799	NaN	1190.9	30	0	151.7	0.143	+			4972	ATQVAVSVPK	10	48	500.29548239579333	998.5764118583867	2	500.29443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATQVAVSVPK_	EIF4G1|p.P1229Qfs*2|1|0.18|ENSG00000114867|chr3:184327606-184327606|C/-|frameshift_variant;ENSG00000114867|ENST00000346169|EIF4G1;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1	68.62578634547417	0.2885473079336931	3				NaN	NaN	0	NaN	4554	3913	8468
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8480	26.824	NaN	1582.3	30	0	548.05	0.214	+			37681	SLSAKRAAPVS	11	42	543.8166656245215	NaN	0	543.8168334960938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLSAKRAAPVS_	ENSG00000070047|ENST00000264555|PHRF1;nc|ENSG00000070047|Q9P1Y6-2|PHRF1;nc|ENSG00000070047|Q9P1Y6-3|PHRF1;PHRF1|p.E1225Kfs*62|1|0.36|ENSG00000070047|chr11:609125-609125|G/-|frameshift_variant;PHRF1|p.L1393Cfs*8|1|0.38|ENSG00000070047|chr11:609628-609628|C/-|frameshift_variant;PHRF1|p.P938Qfs*23|2|0.45|ENSG00000070047|chr11:608263-608263|C/-|frameshift_variant;PHRF1|p.T1126Pfs*73|1|0.36|ENSG00000070047|chr11:608827-608827|C/-|frameshift_variant	32.03412808689991	0.42265347483761584	3				NaN	NaN	0	NaN	4562	3916	8479
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8481	26.828	NaN	986.78	30	0	163.04	0.036	+			37987	SPILCTEPTP	10	40	529.2661743164062	NaN	0	529.2661743164062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SPILCTEPTP_	ENST00000006053.6_2_16:57417370-57417550:+|nuORF	26.69291269510374	0.4125295221340092	3				NaN	NaN	0	NaN	4563	3916	8479
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8498	26.871	NaN	2313.7	30	0	1032.5	0.214			+	22502	KTPIQPRAE	9	38	347.2015517715289	NaN	0	347.2008056640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTPIQPRAE_	REV__ENSG00000100139|ENST00000215957|MICALL1	30.503639358989545	0.3235605894931338	3				NaN	NaN	0	NaN	4574	3922	8497
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8499	26.874	NaN	3746.3	30	0	343.42	0.106	+			44419	TSLREAEFSD	10	67	577.7704612602705	1153.526369587341	2	577.770263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TSLREAEFSD_	ENSG00000110723|ENST00000265843|EXPH5;nc|ENSG00000110723|Q8NEV8-2|EXPH5	37.81151784470057	0.569310847604193	3				NaN	NaN	0	NaN	4575	3922	8497
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8500	26.876	NaN	1441.8	30	0	361.07	0.106	+			43904	TNKPVVSAL	9	34	464.7764814639168	NaN	0	464.7763366699219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TNKPVVSAL_	ENSG00000273079|ENST00000609686|GRIN2B	30.317721548370564	0.32449924987115025	3				NaN	NaN	0	NaN	4576	3922	8497
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8501	26.878	NaN	1006.1	30	0	100.35	0.106			+	23543	LAKLLFLCS	9	47	336.535121446023	NaN	0	336.5342712402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LAKLLFLCS_	REV__ENSG00000124116|ENST00000243938|WFDC3	30.503639358989545	0.3235605894931338	3				NaN	NaN	0	NaN	4577	3922	8497
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8502	26.88	NaN	1131.3	30	0	334.37	0.036	+			8790	EEIVNLTKL	9	36	529.8085804017684	1057.6026078703367	2	529.8077392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EEIVNLTKL_	ENSG00000120051|ENST00000369704|CFAP58	32.75053402867276	0.49717649897795874	3				NaN	NaN	0	NaN	4578	3922	8497
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8513	26.905	NaN	1755.9	30	0	190.02	0.214	+			47226	VMIGLAWVIS	10	54	544.8117065429688	NaN	0	544.8117065429688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VMIGLAWVIS_	ENSG00000133019|ENST00000676153|CHRM3	45.9519527083369	0.331194823726099	3				NaN	NaN	0	NaN	4586	3925	8512
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8514	26.908	NaN	2204.8	30	0	352.04	0.106	+			15450	GTYVGLTCK	9	54	499.7526345992494	997.4907162652988	2	499.7521667480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GTYVGLTC(Carbamidomethyl (C))K_	ENSG00000221926|ENST00000649191|TRIM16;nc|ENSG00000221926|O95361-2|TRIM16;nc|ENSG00000291110|Q309B1|TRIM16L	90.60085204095205	0.06317133949006545	3				NaN	NaN	0	NaN	4587	3925	8512
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8515	26.91	NaN	1683	30	0	187.09	0.106				-1	 	0	53	386.73971962580646	771.4648863184129	2	386.7393493652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4588	3925	8512
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8516	26.912	NaN	3303.3	30	0	412.77	0.035			+	25136	LLRRLTAGP	9	54	332.88200422129665	995.62418326409	3	332.8819580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LLRRLTAGP_	REV__ENSG00000173040|ENST00000344408|EVC2;REV__EVC2|p.L1252Gfs*12|1|0.09|ENSG00000173040|chr4:5563020-5563021|AG/-|frameshift_variant;REV__nc|ENSG00000173040|Q86UK5-2|EVC2;REV__nc|ENSG00000173040|Q86UK5-3|EVC2	30.503639358989545	0.5181749237905803	3				NaN	NaN	0	NaN	4589	3925	8512
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8528	26.938	NaN	4717.1	30	0	1881.9	0.214	+			32505	QVQDLFNKK	9	54	560.3119056220427	1118.6092583108853	2	560.3121948242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QVQDLFNKK_	ENSG00000006704|ENST00000424337|GTF2IRD1;nc|ENSG00000006704|Q9UHL9-3|GTF2IRD1;nc|ENSG00000006704|Q9UHL9|GTF2IRD1	34.172542307311794	0.4838870758800184	3				NaN	NaN	0	NaN	4598	3928	8527
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8529	26.942	NaN	4745.6	30	0	767.47	0.106	+			20853	KILRDWMYK	9	57	626.8477105571334	1251.6808681810667	2	626.84765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KILRDWMYK_	ENSG00000153779|ENST00000283891|TGIF2LX;ENSG00000176679|ENST00000321217|TGIF2LY	26.69291269510374	0.5537881896960711	3				NaN	NaN	0	NaN	4599	3928	8527
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8530	26.944	NaN	1660.1	30	0	535.68	0.036			+	19262	KAEKWNIFA	9	31	553.8028144701657	1105.5910760071313	2	553.8019409179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KAEKWNIFA_	REV__ENSG00000163933|ENST00000296292|RFT1;REV__ENST00000471158.1_1_3:53137921-53154019:-|nuORF	19.996771675451527	0.6112419832031292	3				NaN	NaN	0	NaN	4600	3928	8527
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8552	26.994	NaN	2912.1	30	0	287.87	0.143				-1	 	0	53	336.20232125109743	335.19504478449744	1	336.20245361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4616	3934	8551
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8564	27.021	NaN	3185	30	0	359.15	0.214			+	25082	LLMDALIPLQ	10	66	571.8289004172603	1141.6432479013206	2	571.8289184570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LLM(Oxidation (M))DALIPLQ_	REV__ENSG00000141506|ENST00000447110|PIK3R5;REV__ENST00000578515.5_1_17:8785060-8814811:-|nuORF;REV__nc|ENSG00000141506|Q8WYR1-2|PIK3R5	79.71258880314673	0.19796908725841375	3				NaN	NaN	0	NaN	4625	3937	8563
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8565	27.025	NaN	1459.2	30	0	299.71	0.106	+			41010	SVGSLFVKK	9	48	482.79505695644116	963.5755609796823	2	482.7950134277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVGSLFVKK_	ENSG00000176273|ENST00000427197|SLC35G1;nc|ENSG00000176273|Q2M3R5-2|SLC35G1;SLC35G1|p.S209Kfs*34|1|0.05|ENSG00000176273|chr10:93901016-93901017|-/AAGCATAG|frameshift_variant;SLC35G1|p.V92Cfs*7|2|0.27|ENSG00000176273|chr10:93898660-93898660|A/-|frameshift_variant	68.78682469695295	0.14603441672067394	3				NaN	NaN	0	NaN	4626	3937	8563
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8566	27.027	NaN	1898.6	30	0	206.6	0.039			+	7994	DTEELRAKAVK	11	42	630.3505859375	NaN	0	630.3505859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DTEELRAKAVK_	REV__ENSG00000172053|ENST00000306125|QARS1;REV__nc|ENSG00000172053|P47897-2|QARS1	16.71738777980365	0.456735970842152	3				NaN	NaN	0	NaN	4627	3937	8563
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8578	27.052	NaN	1832.2	30	0	302.3	0.214	+			20481	KEYGQTMTV	9	41	528.7550305087136	1055.4955080842271	2	528.755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEYGQTMTV_	ENSG00000117595|ENST00000367021|IRF6;nc|ENSG00000117595|O14896-2|IRF6	31.634271133179894	0.507608568980346	3				NaN	NaN	0	NaN	4636	3940	8577
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8579	27.056	NaN	1793.3	30	0	170.55	0.036	+			48397	VTIFIRGGNK	10	53	552.8291890616513	NaN	0	552.8289794921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTIFIRGGNK_	ENSG00000150753|ENST00000280326|CCT5;ENST00000423695.6_1_5:10250480-10261980:+|nuORF;nc|ENSG00000150753|P48643-2|CCT5	46.45678178249821	0.32800322091223805	3				NaN	NaN	0	NaN	4637	3940	8577
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8600	27.106	NaN	2830.6	30	0	269.7	0.214	+			6217	AVQTAAKELLK	11	69	586.3560519145957	1170.6975508959913	2	586.35693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVQTAAKELLK_	ENSG00000123992|ENST00000273075|DNPEP;ENST00000430206.5_1_2:220251659-220252065:-|nuORF;ENST00000460963.5_1_2:220250088-220252486:-|nuORF;ENST00000523527.5_1_2:220250965-220252516:-|nuORF;nc|ENSG00000123992|Q9ULA0-2|DNPEP	96.33408219706786	0.07284471942732389	3				NaN	NaN	0	NaN	4652	3946	8599
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8601	27.11	NaN	1530.4	30	0	211.15	0.037	+			1913	AIQNPTMINK	10	41	565.3054655866298	1128.5963782400595	2	565.3053588867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AIQNPTMINK_	ENSG00000167182|ENST00000376741|SP2;nc|ENSG00000167182|Q02086-2|SP2	35.495647763667336	0.589959479604089	3				NaN	NaN	0	NaN	4653	3946	8599
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8613	27.135	NaN	2753.7	30	0	545.59	0.214	+			37149	SITTVQIQK	9	49	509.30076750679837	1016.5869820803968	2	509.3004455566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SITTVQIQK_	ENST00000394091.5_1_3:101177876-101232004:-|nuORF	107.00750918261382	0.032051501805654005	3				NaN	NaN	0	NaN	4662	3949	8612
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8614	27.139	NaN	2422.4	30	0	265.6	0.106	+			12468	GEDKTSAQVSL	11	57	567.7857124976343	1133.5568720620686	2	567.7861938476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEDKTSAQVSL_	ENSG00000110002|ENST00000456829|VWA5A;nc|ENSG00000110002|O00534-2|VWA5A;nc|ENSG00000110002|O00534-3|VWA5A;nc|ENSG00000110002|O00534-4|VWA5A;VWA5A|p.D273Ifs*24|1|0.19|ENSG00000110002|chr11:124123014-124123014|A/-|frameshift_variant;VWA5A|p.D571Mfs*3|1|0.56|ENSG00000110002|chr11:124137094-124137094|A/-|frameshift_variant;VWA5A|p.G366Afs*38|1|0.21|ENSG00000110002|chr11:124123733-124123733|G/-|frameshift_variant	52.167168403610894	0.39337392184041037	3				NaN	NaN	0	NaN	4663	3949	8612
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8615	27.141	NaN	4317.5	30	0	753.42	0.106	+			7501	DGKREPLLSLL	11	45	414.24715577037756	1239.7196379113327	3	414.246826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DGKREPLLSLL_	ENSG00000102243|ENST00000370634|VGLL1	27.64392233501311	0.6998289966465058	3				NaN	NaN	0	NaN	4664	3949	8612
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8616	27.143	NaN	1463	30	0	433.71	0.036	+			47183	VLVGEFAQIQ	10	36	552.3088259604781	1102.603098987756	2	552.3089599609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VLVGEFAQIQ_	IQCD|p.R380Q|1|0.55|ENSG00000166578|chr12:113195786-113195786|C/T|missense_variant	23.52269567125451	0.6877354443478558	3				NaN	NaN	0	NaN	4665	3949	8612
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8629	27.17	NaN	1464.1	30	0	657.52	0.144			+	-1	IRRPPLNW	8	32	547.3158215042545	NaN	0	547.3150024414062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))IRRPPLNW_	REV__ENSG00000132958|ENST00000697147|TPTE2;REV__ENSG00000274391|ENST00000618007|TPTE;REV__nc|ENSG00000132958|Q6XPS3-2|TPTE2;REV__nc|ENSG00000132958|Q6XPS3-3|TPTE2;REV__nc|ENSG00000132958|Q6XPS3-4|TPTE2;REV__nc|ENSG00000132958|Q6XPS3-5|TPTE2;REV__nc|ENSG00000132958|Q6XPS3-6|TPTE2;REV__nc|ENSG00000132958|Q6XPS3-7|TPTE2;REV__nc|ENSG00000274391|P56180-2|TPTE;REV__nc|ENSG00000274391|P56180-3|TPTE;REV__nc|ENSG00000274391|P56180-4|TPTE;REV__TPTE|p.I462Yfs*2|1|0.16|ENSG00000274391|chr21:10602082-10602082|A/-|frameshift_variant;REV__TPTE|p.L403I|1|0.1|ENSG00000274391|chr21:10596018-10596018|C/A|missense_variant;REV__TPTE2|p.D442Kfs*3|1|0.2|ENSG00000132958|chr13:19426493-19426496|TGTC/-|frameshift_variant	27.882242232435846	1.7418937515398478	3				NaN	NaN	0	NaN	4675	3952	8628
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8644	27.203	NaN	1569.2	30	0	247.4	0.214			+	29816	PKLQIITK	8	43	470.81311602252015	939.6116791118403	2	470.8131103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PKLQIITK_	REV__DST|p.K5076Nfs*24|1|0.31|ENSG00000151914|chr6:56472218-56472218|T/-|frameshift_variant;REV__DST|p.L1539Ffs*11|1|0.39|ENSG00000151914|chr6:56611525-56611526|-/A|frameshift_variant;REV__DST|p.N1220Tfs*9|1|0.23|ENSG00000151914|chr6:56630354-56630354|T/-|frameshift_variant;REV__DST|p.T4428Nfs*23|1|0.12|ENSG00000151914|chr6:56497896-56497897|-/T|frameshift_variant;REV__ENSG00000151914|ENST00000680361|DST;REV__nc|ENSG00000151914|Q03001-14|DST;REV__nc|ENSG00000151914|Q03001-3|DST;REV__nc|ENSG00000151914|Q03001-8|DST;REV__nc|ENSG00000151914|Q03001-9|DST;REV__nc|ENSG00000151914|Q03001|DST	33.51558372728122	0.7005509609380386	3				NaN	NaN	0	NaN	4687	3955	8643
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8645	27.207	NaN	1567.2	30	0	296.72	0.037			+	-1	LSYLFMIKQ	9	46	579.8169555664062	NaN	0	579.8169555664062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LSYLFM(Oxidation (M))IKQ_	REV__ENSG00000163357|ENST00000295542|DCST1;REV__nc|ENSG00000163357|Q5T197-2|DCST1	60.97194046774394	0.14517358171632622	3				NaN	NaN	0	NaN	4688	3955	8643
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8663	27.252	NaN	19541	30	0	1642.1	0.145			+	7931	DSHSRHDSHSR	11	91	660.7935109970288	1319.5724690608574	2	660.7944946289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DSHSRHDSHSR_	REV__ENSG00000153922|ENST00000614616|CHD1;REV__nc|ENSG00000153922|O14646-2|CHD1	83.6470233535746	0.12478191950840195	3				NaN	NaN	0	NaN	4700	3961	8662
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8674	27.277	NaN	4228.4	30	0	1070.5	0.145	+			49795	VYSHVIQKL	9	51	362.8819092701175	1085.6238984105526	3	363.2161560058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYSHVIQKL_	ENSG00000135094|ENST00000257549|SDS;SDS|p.G305Afs*18|1|0.17|ENSG00000135094|chr12:113393014-113393014|C/-|frameshift_variant	31.954861631926434	0.5046124803899898	3				NaN	NaN	0	NaN	4708	3964	8673
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8684	27.301	NaN	5074.4	30	0	963.31	0.214	+			46593	VFQEHQTL	8	52	501.25663151429876	1000.4987100953975	2	501.2560119628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VFQEHQTL_	ENSG00000085733|ENST00000301843|CTTN;ENST00000415461.2_1_11:70253665-70266006:+|nuORF;nc|ENSG00000085733|Q14247-2|CTTN;nc|ENSG00000085733|Q14247-3|CTTN	93.19546047674547	0.2677966331495483	3				NaN	NaN	0	NaN	4715	3967	8683
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8685	27.304	NaN	2244.9	30	0	271.39	0.106			+	6493	AWENVVKLK	9	58	543.8194567944585	1085.6243606557168	2	543.8199462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AWENVVKLK_	REV__OSBP2|p.R356W|1|0.27|ENSG00000184792|chr22:30870641-30870641|C/T|missense_variant	60.11826168202944	0.21262886028301267	3				NaN	NaN	0	NaN	4716	3967	8683
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8686	27.306	NaN	1369.6	30	0	374.71	0.034			+	29356	PAARARGPPA	10	30	482.27681053653413	962.5390681398683	2	482.2767333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PAARARGPPA_	REV__ENSG00000116017|ENST00000263620|ARID3A	18.324413293986947	0.7233354337501514	3				NaN	NaN	0	NaN	4717	3967	8683
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8697	27.332	NaN	1239.4	30	0	253.28	0.214			+	47987	VSPQKKSSVT	10	35	530.80325330464	NaN	0	530.8037109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSPQKKSSVT_	REV__ANKRD17|p.L2249Yfs*84|1|0.34|ENSG00000132466|chr4:73090884-73090884|G/-|frameshift_variant;REV__ANKRD17|p.T1645A|1|0.09|ENSG00000132466|chr4:73098161-73098161|T/C|missense_variant;REV__ENSG00000132466|ENST00000358602|ANKRD17;REV__nc|ENSG00000132466|O75179-2|ANKRD17;REV__nc|ENSG00000132466|O75179-4|ANKRD17;REV__nc|ENSG00000132466|O75179-6|ANKRD17;REV__nc|ENSG00000132466|O75179-7|ANKRD17	25.57405402267927	0.4162033004763879	3				NaN	NaN	0	NaN	4725	3970	8696
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8698	27.335	NaN	2221.4	30	0	376.86	0.038	+			21565	KPDFLRDIQS	10	59	609.8291015625	NaN	0	609.8291015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KPDFLRDIQS_	ENSG00000115556|ENST00000450993|PLCD4	41.42661286455405	0.3598046802465243	3				NaN	NaN	0	NaN	4726	3970	8696
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8710	27.361	NaN	2052.8	30	0	293.89	0.143			+	17861	IFTLMFGLS	9	48	514.7797224840637	1027.5448920349272	2	514.780029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IFTLMFGLS_	REV__ENST00000396051.2_1_4:71840973-71844946:+|nuORF	24.20275056022122	0.577060078256802	3				NaN	NaN	0	NaN	4735	3973	8709
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8721	27.388	NaN	1721.4	30	0	198.22	0.214	+			1756	AIALALREK	9	53	492.8143159707672	983.6140790083344	2	492.81378173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AIALALREK_	ENSG00000039123|ENST00000230640|MTREX	110.11987700582712	0.028875675806141952	3				NaN	NaN	0	NaN	4743	3976	8720
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8722	27.392	NaN	1574.7	30	0	298.74	0.036	+			11840	FSWSSAFTK	9	55	530.7565145390042	1059.4984761448084	2	530.7572021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FSWSSAFTK_	ENSG00000146757|ENST00000328747|ZNF92;nc|ENSG00000146757|Q03936-2|ZNF92;nc|ENSG00000146757|Q03936-3|ZNF92	45.97224482568171	0.3502073465782774	3				NaN	NaN	0	NaN	4744	3976	8720
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8733	27.417	NaN	2730.6	30	0	440.29	0.215	+			17200	HVASQPVM	8	43	434.7209822130798	867.4274114929597	2	434.7205505371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HVASQPVM_	ENSG00000214013|ENST00000318010|GANC	31.954861631926434	0.7126016770032289	3				NaN	NaN	0	NaN	4752	3979	8732
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8734	27.42	NaN	2344.6	30	0	452.99	0.035			+	-1	SPMLILAMI	9	47	335.52238727168384	1003.5453324152516	3	335.52227783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_SPM(Oxidation (M))LILAMI_	REV__nc|ENSG00000203721|A6NCI5|LINC00862	26.69291269510374	0.5537881896960711	3				NaN	NaN	0	NaN	4753	3979	8732
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8747	27.447	NaN	1459	30	0	130.05	0.214			+	20837	KIIETRKI	8	44	500.82997558313673	999.6453982330735	2	500.8291320800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KIIETRKI_	REV__tr|U7SGE6|U7SGE6_FUSNULysine--tRNAligaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=lysSPE=3SV=1	49.44154591367651	0.597725784090933	3				NaN	NaN	0	NaN	4763	3982	8746
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8748	27.451	NaN	1835.4	30	0	293.48	0.034	+			19851	KEEIIKTL	8	48	487.30040664791443	972.5862603626289	2	487.2998962402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEEIIKTL_	ENSG00000108298|ENST00000225430|RPL19;ENST00000423330.1_1_9:133527641-133527767:+|nuORF;ENST00000424919.1_1_X:150162237-150162561:+|nuORF;ENST00000432746.1_1_7:102781798-102782185:-|nuORF;ENST00000433839.1_1_10:122892628-122892781:-|nuORF;ENST00000498753.1_1_3:141762467-141763034:-|nuORF;ENST00000577759.1_1_17:37360679-37360898:+|nuORF	45.97224482568171	0.6192535143389125	3				NaN	NaN	0	NaN	4764	3982	8746
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8757	27.473	NaN	3117.5	30	0	591.4	0.145			+	6911	CLVTEDEVKK	10	65	610.8133855189174	NaN	0	610.8134155273438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_C(Carbamidomethyl (C))LVTEDEVKK_	REV__nc|ENSG00000108799|Q92800-3|EZH1	62.107414245175825	0.217068727747531	3				NaN	NaN	0	NaN	4770	3985	8756
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8780	27.528	NaN	1388.8	30	0	214.06	0.214	+			27870	MTKAVTVRGH	10	45	550.3042657014445	1098.5939784696889	2	550.3034057617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MTKAVTVRGH_	ENSG00000188162|ENST00000399397|OTOG;nc|ENSG00000188162|Q6ZRI0-2|OTOG;nc|ENSG00000188162|Q6ZRI0|OTOG	52.936696900407355	0.4300801048568001	3				NaN	NaN	0	NaN	4787	3991	8779
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8781	27.532	NaN	1676.3	30	0	211.06	0.106	+			32916	RDVKALTL	8	47	458.28514394833695	914.5557349634739	2	458.2841491699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RDVKALTL_	ENSG00000133872|ENST00000256255|SARAF;ENST00000517569.1_1_8:29931365-29940465:-|nuORF	45.02220120713402	0.6251487313365616	3				NaN	NaN	0	NaN	4788	3991	8779
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8782	27.534	NaN	2041.7	30	0	370.75	0.034	+			3636	ASWGGTIEK	9	42	474.7429989882359	947.4714450432718	2	474.74285888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASWGGTIEK_	ENSG00000144426|ENST00000683969|NBEAL1;NBEAL1|p.A1274Qfs*17|1|0.1|ENSG00000144426|chr2:203135766-203135766|A/-|frameshift_variant;NBEAL1|p.F1670Lfs*25|1|0.21|ENSG00000144426|chr2:203144843-203144843|T/-|frameshift_variant;NBEAL1|p.F2315Lfs*2|1|0.17|ENSG00000144426|chr2:203193900-203193900|T/-|frameshift_variant;NBEAL1|p.K2562Rfs*15|1|0.41|ENSG00000144426|chr2:203209306-203209306|A/-|frameshift_variant;NBEAL1|p.N2072Kfs*10|1|0.35|ENSG00000144426|chr2:203172825-203172826|-/A|frameshift_variant;NBEAL1|p.T1311Nfs*3|1|0.08|ENSG00000144426|chr2:203135875-203135876|-/A|frameshift_variant;nc|ENSG00000144426|Q6ZS30-1|NBEAL1;nc|ENSG00000144426|Q6ZS30|NBEAL1	33.921630207806714	0.48623198279849766	3				NaN	NaN	0	NaN	4789	3991	8779
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8794	27.559	NaN	1893.2	30	0	707.28	0.214	+			50319	WTFDAYYD	8	26	540.7200210285873	1079.4254891239746	2	540.7196655273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WTFDAYYD_	ENSG00000138759|ENST00000512123|FRAS1;FRAS1|p.G3456Afs*3|1|0.28|ENSG00000138759|chr4:78515987-78515987|G/-|frameshift_variant;nc|ENSG00000138759|Q86XX4|FRAS1	20.481830146152948	0.8005983782650069	3				NaN	NaN	0	NaN	4798	3994	8793
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8795	27.563	NaN	2817.5	30	0	470.2	0.035	+			18179	ILWEHTDE	8	50	521.7472382320087	NaN	0	521.7474975585938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ILWEHTDE_	ENST00000396776.6_1_5:57787363-57789485:+|nuORF	38.80614096846853	1.7418937515398478	3				NaN	NaN	0	NaN	4799	3994	8793
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8808	27.59	NaN	12071	30	0	1869.7	0.144				-1	 	0	71	554.7858163616457	1107.5570797900914	2	554.7855834960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4809	3997	8807
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8821	27.619	NaN	2359.5	30	0	590.78	0.145				-1	CWPLSDQAR	9	36	566.7645611088298	1131.5145692844594	2	567.2669677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_C(Carbamidomethyl (C))WPLSDQAR_	ENST00000229340.9_1_12:120533179-120533533:-|nuORF	20.94693142431847	0.6074874384046576	3				NaN	NaN	0	NaN	4819	4000	8820
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8834	27.648	NaN	1621.4	30	0	397.99	0.214	+			15242	GTTAVFINK	9	45	475.7688969164637	949.5232408997274	2	475.7686462402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTTAVFINK_	ASH1L|p.H1793Ifs*7|1|0.13|ENSG00000116539|chr1:155438778-155438778|G/-|frameshift_variant;ASH1L|p.I970Lfs*9|1|0.2|ENSG00000116539|chr1:155479962-155479962|T/-|frameshift_variant;ASH1L|p.K1222Rfs*11|4|0.27|ENSG00000116539|chr1:155479205-155479205|T/-|frameshift_variant;ASH1L|p.K1533Sfs*17|1|0.25|ENSG00000116539|chr1:155478272-155478272|T/-|frameshift_variant;ASH1L|p.K2377Nfs*5|1|0.28|ENSG00000116539|chr1:155354570-155354570|T/-|frameshift_variant;ASH1L|p.N1822Tfs*2|1|0.33|ENSG00000116539|chr1:155438690-155438690|T/-|frameshift_variant;ASH1L|p.R712Efs*23|3|0.35|ENSG00000116539|chr1:155480736-155480736|T/-|frameshift_variant;ASH1L|p.S2309Ifs*11|1|0.64|ENSG00000116539|chr1:155357635-155357636|-/T|frameshift_variant;ENSG00000116539|ENST00000392403|ASH1L;nc|ENSG00000116539|Q9NR48|ASH1L	32.81241826257853	0.4965981579233955	3				NaN	NaN	0	NaN	4829	4003	8833
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8835	27.652	NaN	1953.4	30	0	319.81	0.106	+			47094	VLKVLSSLK	9	52	493.83489599252505	985.6552390518501	2	493.834228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VLKVLSSLK_	DIDO1|p.G1745Afs*119|1|0.26|ENSG00000101191|chr20:62880722-62880722|C/-|frameshift_variant;DIDO1|p.P1738Hfs*126|1|0.39|ENSG00000101191|chr20:62880743-62880743|G/-|frameshift_variant;DIDO1|p.S1285Afs*76|1|0.39|ENSG00000101191|chr20:62882104-62882104|G/-|frameshift_variant;ENSG00000101191|ENST00000395343|DIDO1	32.81241826257853	0.4965981579233955	3				NaN	NaN	0	NaN	4830	4003	8833
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8836	27.654	NaN	1918.6	30	0	216.03	0.035			+	24383	LFTHGGDSF	9	47	490.7260093756126	979.4374658180252	2	490.724853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LFTHGGDSF_	REV__ENSG00000117480|ENST00000243167|FAAH;REV__ENST00000484697.5_1_1:46871424-46877830:+|nuORF;REV__ENST00000489366.2_1_1:46871719-46874871:+|nuORF	65.80317337860623	0.1652391959156183	3				NaN	NaN	0	NaN	4831	4003	8833
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8849	27.681	NaN	4333.7	30	0	567.56	0.145	+			48197	VTAKELSLVNK	11	76	601.360994832907	1200.7074367326138	2	601.8634033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTAKELSLVNK_	ENSG00000050405|ENST00000341247|LIMA1;LIMA1|p.T536Lfs*38|2|0.4|ENSG00000050405|chr12:50177739-50177739|G/-|frameshift_variant;nc|ENSG00000050405|Q9UHB6-4|LIMA1	71.26799761394534	0.2251688185219333	3				NaN	NaN	0	NaN	4841	4006	8848
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8863	27.712	NaN	1224	30	0	305.89	0.144			+	23368	KYYAPMLND	9	28	557.7640279730687	NaN	0	557.7644653320312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KYYAPMLND_	REV__CYP21A2|p.V306Afs*8|1|0.05|ENSG00000231852|chr6:32040182-32040183|-/C|frameshift_variant;REV__ENSG00000231852|ENST00000644719|CYP21A2;REV__nc|ENSG00000231852|P08686-2|CYP21A2	27.882242232435846	0.3367954786602879	3				NaN	NaN	0	NaN	4852	4009	8862
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8875	27.74	NaN	8315.5	30	0	2541.2	0.139				-1	 	0	54	343.19914883519823	684.3837447371965	2	343.1987609863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4861	4012	8874
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8886	27.766	NaN	2217.2	30	0	329.25	0.214	+			51595	YYQDTPKQI	9	48	578.28786162945	1154.5611703257	2	578.2876586914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YYQDTPKQI_	ENSG00000048162|ENST00000614830|NOP16	67.49366992349736	0.1516260258713357	3				NaN	NaN	0	NaN	4869	4015	8885
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8887	27.77	NaN	1644.7	30	0	269.46	0.106	+			43579	TIFGKIIRK	9	57	538.3531275359537	1074.6917021387073	2	538.3529663085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TIFGKIIRK_	ENSG00000169567|ENST00000304043|HINT1	42.86426827375447	0.38666266728046506	3				NaN	NaN	0	NaN	4870	4015	8885
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8888	27.772	NaN	803.61	30	0	132.51	0.035			+	51491	YVLEGHDF	8	25	490.228950509829	NaN	0	490.22869873046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YVLEGHDF_	REV__ENSG00000173852|ENST00000638088|DPY19L1;REV__ENST00000426647.2_1_7:32852458-32867019:+|nuORF;REV__nc|ENSG00000173852|Q2PZI1|DPY19L1	19.359975847455235	1.7418937515398478	3				NaN	NaN	0	NaN	4871	4015	8885
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8899	27.798	NaN	2132.1	30	0	378.96	0.214	+			20312	KEQELQQTL	9	43	558.7989909779018	1115.5834290226035	2	558.7990112304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEQELQQTL_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	45.02220120713402	0.3613509778819777	3				NaN	NaN	0	NaN	4879	4018	8898
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8900	27.801	NaN	1169.4	30	0	186.79	0.106	+			11905	FVADIFRRA	9	43	547.8090733809564	1093.6035938287127	2	547.80859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FVADIFRRA_	ENSG00000132017|ENST00000254337|DCAF15	30.317721548370564	0.5199124245378496	3				NaN	NaN	0	NaN	4880	4018	8898
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8901	27.803	NaN	1204.5	30	0	130.97	0.035			+	2121	ALHVLLVNE	9	55	336.5343192940632	NaN	0	336.53472900390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ALHVLLVNE_	REV__ENSG00000155858|ENST00000286307|LSM11	31.954861631926434	0.3162336699109506	3				NaN	NaN	0	NaN	4881	4018	8898
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8921	27.853	NaN	7313.5	30	0	699.1	0.214	+			4444	ATILAGDVKVK	11	73	557.8457451918373	1113.6769374504745	2	557.845947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATILAGDVKVK_	ENSG00000119669|ENST00000238647|IRF2BPL;ENSG00000168264|ENST00000366609|IRF2BP2;nc|ENSG00000168264|Q7Z5L9-2|IRF2BP2;nc|ENSG00000168264|Q7Z5L9-3|IRF2BP2	150.08711810540066	7.036711045829789E-05	3				NaN	NaN	0	NaN	4895	4024	8920
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8922	27.857	NaN	2410.9	30	0	1376.9	0.034			+	29745	PHRGLPAAL	9	40	466.2767979894461	930.5390430456922	2	466.2760925292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PHRGLPAAL_	REV__ENST00000373045.10_1_1:38259693-38260377:+|nuORF	30.503639358989545	0.5181749237905803	3				NaN	NaN	0	NaN	4896	4024	8920
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8933	27.882	NaN	1045.4	30	0	230.94	0.143			+	-1	RIYTSCTF	8	35	524.2479931431321	NaN	0	524.2487182617188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_RIYTSC(Carbamidomethyl (C))TF_	REV__ZNF491|p.I396T|1|0.21|ENSG00000177599|chr19:11807140-11807140|T/C|missense_variant	20.94693142431847	1.7418937515398478	3				NaN	NaN	0	NaN	4904	4027	8932
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8967	27.965	NaN	2125.7	30	0	581.91	0.214	+			1195	AEPADLQGMLL	11	36	386.5329205537854	NaN	0	386.53277587890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEPADLQGMLL_	ENSG00000102935|ENST00000563137|ZNF423;nc|ENSG00000102935|Q2M1K9-2|ZNF423;nc|ENSG00000102935|Q2M1K9|ZNF423	14.864876125193954	0.456735970842152	3				NaN	NaN	0	NaN	4929	4036	8966
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8968	27.968	NaN	1270.9	30	0	176.59	0.034			+	29875	PLHLAFEL	8	29	470.2665477795303	NaN	0	470.26678466796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PLHLAFEL_	REV__ENSG00000134508|ENST00000256925|CABLES1;REV__nc|ENSG00000134508|Q8TDN4-2|CABLES1;REV__nc|ENSG00000134508|Q8TDN4-3|CABLES1;REV__nc|ENSG00000134508|Q8TDN4-4|CABLES1	21.70233525837049	1.7418937515398478	3				NaN	NaN	0	NaN	4930	4036	8966
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8979	27.991	NaN	1645.3	30	0	280.6	0.143	+			37515	SLLKSVQPD	9	41	493.77976053579226	985.5449681383845	2	493.7788391113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLLKSVQPD_	ENSG00000100731|ENST00000304743|PCNX1;ENSG00000135749|ENST00000258229|PCNX2;ENSG00000197136|ENST00000355703|PCNX3;ENST00000324142.4_1_1:233337898-233388268:-|nuORF;ENST00000475463.6_1_1:233201380-233353905:-|nuORF;nc|ENSG00000100731|Q96RV3-3|PCNX1;nc|ENSG00000100731|Q96RV3-4|PCNX1;nc|ENSG00000135749|A6NKB5-2|PCNX2;nc|ENSG00000135749|A6NKB5-5|PCNX2;nc|ENSG00000197136|Q9H6A9-2|PCNX3	44.377184641726394	0.36891676396732553	3				NaN	NaN	0	NaN	4938	4039	8978
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8991	28.019	NaN	4720.6	30	0	818.62	0.214	+			38550	SSFCCRRTV	9	57	529.747389604985	1057.4802262767698	2	529.7479858398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSFCCRRTV_	ENST00000514858.5_1_4:2172840-2209821:-|nuORF	64.20726635412375	0.17854274437659667	3				NaN	NaN	0	NaN	4947	4042	8990
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8992	28.022	NaN	1657.5	30	0	259.24	0.106	+			41543	SVQDSSVLVQR	11	39	609.3272409203504	NaN	0	609.3271484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVQDSSVLVQR_	ENSG00000083097|ENST00000349129|DOP1A	33.54155758786652	0.41593550007728836	3				NaN	NaN	0	NaN	4948	4042	8990
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8993	28.024	NaN	1040.9	30	0	120.95	0.106	+			12533	GEFKQTSSF	9	37	515.7461547851562	NaN	0	515.7461547851562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEFKQTSSF_	ENSG00000158769|ENST00000368026|F11R;nc|ENSG00000158769|Q9Y624-2|F11R	22.579656572578934	0.3605601358598771	3				NaN	NaN	0	NaN	4949	4042	8990
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	8994	28.026	NaN	1217.6	30	0	217.03	0.036			+	-1	ELVGNCYLL	9	34	540.7754643596041	NaN	0	540.7749633789062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_ELVGNC(Carbamidomethyl (C))YLL_	REV__ENSG00000013306|ENST00000377095|SLC25A39;REV__nc|ENSG00000013306|Q9BZJ4-2|SLC25A39	31.954861631926434	0.3162336699109506	3				NaN	NaN	0	NaN	4950	4042	8990
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9005	28.051	NaN	1658.6	30	0	233.43	0.143			+	43642	TIRKIPDM	8	45	487.2774540260364	972.5403551188729	2	487.27685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TIRKIPDM_	REV__CDK8|p.L359*|1|0.13|ENSG00000132964|chr13:26401309-26401309|T/-|frameshift_variant;REV__ENSG00000132964|ENST00000381527|CDK8;REV__nc|ENSG00000132964|P49336-2|CDK8	42.396135135203025	0.6414440140393314	3				NaN	NaN	0	NaN	4958	4045	9004
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9016	28.078	NaN	2437.7	30	0	304.73	0.142	+			4691	ATLSICSPK	9	52	488.76082522993755	975.5070975266751	2	488.7604064941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_ATLSIC(Carbamidomethyl (C))SPK_	ENSG00000121060|ENST00000316881|TRIM25;ENST00000572021.5_1_17:54969063-54989474:-|nuORF;TRIM25|p.G621D|1|0.15|ENSG00000121060|chr17:56891731-56891731|C/T|missense_variant	110.11987700582712	0.028875675806141952	3				NaN	NaN	0	NaN	4966	4048	9015
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9034	28.124	NaN	3796	30	0	485.33	0.212	+			20187	KEKYIDQEEL	10	74	647.8294505082398	1293.6443480832795	2	647.8292236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEKYIDQEEL_	ENSG00000080824|ENST00000216281|HSP90AA1;ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000507090.2_1_4:13338641-13339112:+|nuORF;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;HSP90AA1|p.K419Nfs*3|1|0.25|ENSG00000080824|chr14:102083874-102083874|T/-|frameshift_variant;HSP90AA1|p.S330Qfs*48|1|0.21|ENSG00000080824|chr14:102084558-102084558|A/-|frameshift_variant;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000205940|Q58FF8|HSP90AB2P;nc|ENSG00000224411|Q14568|HSP90AA2P	74.1650062923329	0.2432923583094885	3				NaN	NaN	0	NaN	4978	4054	9033
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9035	28.127	NaN	1384.3	30	0	264.01	0.106	+			44180	TQTQFFHVK	9	44	568.2994007704732	NaN	0	568.2984619140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TQTQFFHVK_	ENSG00000163564|ENST00000368140|PYHIN1;ENSG00000163565|ENST00000295809|IFI16;ENST00000485134.1_1_1:158911778-158914889:+|nuORF;ENST00000493884.5_1_1:158984458-159022017:+|nuORF;nc|ENSG00000163564|Q6K0P9-2|PYHIN1;nc|ENSG00000163564|Q6K0P9-3|PYHIN1;nc|ENSG00000163564|Q6K0P9-4|PYHIN1;nc|ENSG00000163565|Q16666-2|IFI16;nc|ENSG00000163565|Q16666-3|IFI16;nc|ENSG00000163565|Q16666-6|IFI16;nc|ENSG00000163565|Q16666-8|IFI16	28.5767321226876	0.3332891435719929	3				NaN	NaN	0	NaN	4979	4054	9033
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9036	28.129	NaN	1127.3	30	0	268.68	0.034			+	9798	EPAADMEVS	9	26	474.70404719352996	947.3935414538599	2	474.703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EPAADMEVS_	REV__KRT12|p.G291Efs*75|1|0.45|ENSG00000187242|chr17:40863802-40863802|G/-|frameshift_variant	17.364965105453717	0.6112419832031293	3				NaN	NaN	0	NaN	4980	4054	9033
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9048	28.154	NaN	2543.6	30	0	1112.5	0.141				-1	 	0	33	424.7508444008223	847.4871358684446	2	424.75048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	4989	4057	9047
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9072	28.21	NaN	2017.4	30	0	263.61	0.145	+			4559	ATLEETLVKK	10	49	566.3348993777661	1130.655245822332	2	566.3356323242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATLEETLVKK_	ENSG00000254093|ENST00000314787|PINX1	41.080066990542036	0.5391928043837881	3				NaN	NaN	0	NaN	5007	4063	9071
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9096	28.266	NaN	1083.4	30	0	94.375	0.214	+			42731	TDIKAFNLK	9	52	525.3032234784113	1048.5918940236224	2	525.3037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TDIKAFNLK_	tr|U7SUL0|U7SUL0_FUSNUBacterialtranscriptionalactivatordomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01209PE=4SV=1	42.396135135203025	0.392153681582562	3				NaN	NaN	0	NaN	5025	4069	9095
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9097	28.27	NaN	1891.8	30	0	703.23	0.106			+	13171	GHPVGETLYLD	11	35	400.8684379531683	1199.583484459705	3	400.8681945800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GHPVGETLYLD_	REV__ENSG00000165716|ENST00000371692|DIPK1B;REV__nc|ENSG00000165716|Q5VUD6-2|DIPK1B	20.030474535948922	0.7766990143561855	3				NaN	NaN	0	NaN	5026	4069	9095
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9098	28.272	NaN	2074.8	30	0	224.96	0.034	+			3797	ATAGIIGVNR	10	49	486.28534587506255	970.5561388169251	2	486.2849426269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATAGIIGVNR_	CLTC-CEP95|1|fusion;CLTC|p.A1374*|1|0.05|ENSG00000141367|chr17:59683464-59683465|-/TA|frameshift_variant;CLTC|p.D632Yfs*7|1|0.15|ENSG00000141367|chr17:59666589-59666590|-/TTACA|frameshift_variant;ENSG00000141367|ENST00000269122|CLTC;ENST00000472129.3_1_17:57725612-57733400:+|nuORF;nc|ENSG00000141367|Q00610-2|CLTC	87.69643885390035	0.14426223466775756	3				NaN	NaN	0	NaN	5027	4069	9095
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9111	28.3	NaN	680.86	30	0	62.171	0.142			+	8006	DTLEKSTI	8	32	453.7428739952988	NaN	0	453.7428894042969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DTLEKSTI_	REV__tr|U7SIU5|U7SIU5_FUSNUArginine--tRNAligaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=argSPE=3SV=1	49.44154591367651	1.7418937515398478	3				NaN	NaN	0	NaN	5037	4072	9110
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9120	28.323	NaN	1164.8	30	0	261.78	0.214	+			50113	WGWVPPGL	8	36	456.2425010577155	910.470449182231	2	456.2416076660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WGWVPPGL_	ENST00000544718.1_1_12:132403795-132404230:+|nuORF	24.504012794735996	0.7701314986472447	3				NaN	NaN	0	NaN	5043	4075	9119
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9121	28.327	NaN	2149.8	30	0	218.59	0.038	+			49490	VVYTSHLQLK	10	61	594.3427119636444	1186.6708709940888	2	594.84375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVYTSHLQLK_	ENSG00000015568|ENST00000016946|RGPD5;ENSG00000153165|ENST00000409886|RGPD3;ENSG00000153201|ENST00000283195|RANBP2;ENSG00000169629|ENST00000302558|RGPD8;ENSG00000183054|ENST00000329516|RGPD6;ENSG00000185304|ENST00000398146|RGPD2;ENSG00000187627|ENST00000641458|RGPD1;ENSG00000196862|ENST00000408999|RGPD4;ENST00000522286.5_1_2:113158797-113161561:-|nuORF;nc|ENSG00000183054|Q99666-2|RGPD5;nc|ENSG00000187627|P0DJD0|RGPD1;RANBP2|p.A864Lfs*3|1|0.3|ENSG00000153201|chr2:108758533-108758533|G/-|frameshift_variant;RANBP2|p.C2737Vfs*35|1|0.18|ENSG00000153201|chr2:108772957-108772957|T/-|frameshift_variant;RANBP2|p.F3068Lfs*10|1|0.06|ENSG00000153201|chr2:108782692-108782692|T/-|frameshift_variant;RANBP2|p.H3114Sfs*18|1|0.33|ENSG00000153201|chr2:108782827-108782828|-/T|frameshift_variant;RANBP2|p.K1989Nfs*9|1|0.05|ENSG00000153201|chr2:108766505-108766506|-/TATCCTG|frameshift_variant;RANBP2|p.K2576Nfs*63|2|0.22|ENSG00000153201|chr2:108768262-108768262|A/-|frameshift_variant;RANBP2|p.S1486Rfs*51|1|0.05|ENSG00000153201|chr2:108764996-108764997|-/ATTTTGTATTC|frameshift_variant;RGPD2|p.F1350Lfs*25|1|0.25|ENSG00000185304|chr2:87782974-87782974|A/-|frameshift_variant;RGPD3|p.V1441*|1|0.45|ENSG00000153165|chr2:106423647-106423647|T/-|frameshift_variant;RGPD4|p.K568Nfs*33|1|0.14|ENSG00000196862|chr2:107859787-107859787|A/-|frameshift_variant	77.53327743719008	0.21577387331637743	3				NaN	NaN	0	NaN	5044	4075	9119
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9132	28.352	NaN	3228.5	30	0	1182.7	0.144	+			49803	VYSRREFI	8	39	535.2933497229676	1068.5721465127351	2	535.2931518554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYSRREFI_	ENST00000321535.4_1_17:6690264-6690697:+|nuORF	38.80614096846853	0.6637206697844082	3				NaN	NaN	0	NaN	5052	4078	9131
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9146	28.382	NaN	1545.7	30	0	149.71	0.214	+			41124	SVISTDPLKR	10	41	558.3249226060499	1114.6352922788997	2	558.3247680664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVISTDPLKR_	ENSG00000187741|ENST00000389301|FANCA;FANCA|p.E800Gfs*16|1|0.13|ENSG00000187741|chr16:89769934-89769944|CATCCACCTCT/-|frameshift_variant;FANCA|p.G972Afs*17|1|0.37|ENSG00000187741|chr16:89758643-89758643|C/-|frameshift_variant;FANCA|p.V925Rfs*18|1|0.2|ENSG00000187741|chr16:89764895-89764896|-/G|frameshift_variant;nc|ENSG00000187741|O15360-3|FANCA	37.59989570853033	0.5712608395912122	3				NaN	NaN	0	NaN	5063	4081	9145
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9147	28.386	NaN	2176.7	30	0	463.8	0.037			+	50155	WKKEVTVEH	9	41	578.3117065429688	NaN	0	578.3117065429688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WKKEVTVEH_	REV__ENSG00000112159|ENST00000369393|MDN1;REV__MDN1|p.E2692*|2|0.32|ENSG00000112159|chr6:89706133-89706134|-/A|frameshift_variant;REV__MDN1|p.F2691Lfs*7|2|0.37|ENSG00000112159|chr6:89706134-89706134|A/-|frameshift_variant;REV__MDN1|p.K2642Nfs*17|2|0.29|ENSG00000112159|chr6:89707449-89707449|T/-|frameshift_variant;REV__MDN1|p.L4077Cfs*15|1|0.16|ENSG00000112159|chr6:89680625-89680625|G/-|frameshift_variant;REV__MDN1|p.L5278Ffs*6|1|0.18|ENSG00000112159|chr6:89652273-89652274|-/A|frameshift_variant	18.262085536374414	0.37517301184500873	3				NaN	NaN	0	NaN	5064	4081	9145
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9158	28.411	NaN	2291.7	30	0	462.69	0.143				-1	 	0	54	494.2610194250304	493.2537429584304	1	494.2631530761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5072	4084	9157
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9169	28.436	NaN	1984.9	30	0	276.31	0.214	+			18299	IPPKQLHR	8	54	330.20591331155435	987.5959105348632	3	330.20574951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IPPKQLHR_	HERV35I-int_dup77|chr3:106541134-106546233:+|1.3860853119714591|0.1976016791882729|2.81|468.0|310|2|anti-sense	26.79610172149135	0.7524337208463756	3				NaN	NaN	0	NaN	5080	4087	9168
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9170	28.44	NaN	1344.1	30	0	135.99	0.037	+			5701	AVFDGAQVTSK	11	49	561.7942504882812	NaN	0	561.7942504882812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVFDGAQVTSK_	ENSG00000175274|ENST00000525680|TP53I11	45.02220120713402	0.3510711409553835	3				NaN	NaN	0	NaN	5081	4087	9168
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9185	28.471	NaN	2303	30	0	386.88	0.145	+			14551	GTFGATSLQQR	11	51	583.3026123046875	NaN	0	583.3026123046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTFGATSLQQR_	ENSG00000243667|ENST00000295121|DNAAF10;ENST00000492039.6_1_2:68352461-68384592:-|nuORF;nc|ENSG00000243667|Q96MX6-2|DNAAF10	29.244998729987998	0.43508344294624546	3				NaN	NaN	0	NaN	5093	4090	9184
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9197	28.498	NaN	1708	30	0	216.55	0.143			+	-1	IIMGMATEL	9	45	497.75195846105265	993.4893639889053	2	497.7507629394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_IIM(Oxidation (M))GMATEL_	REV__ENSG00000163993|ENST00000296370|S100P	31.954861631926434	0.5046124803899898	3				NaN	NaN	0	NaN	5102	4093	9196
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9208	28.525	NaN	3174.1	30	0	601.71	0.214	+			26398	LTECLRRHK	9	47	385.88530770394175	1154.6340937120253	3	385.88494873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LTECLRRHK_	ENSG00000171773|ENST00000301944|NXNL1	40.77816245573522	0.41113185337114944	3				NaN	NaN	0	NaN	5110	4096	9207
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9209	28.528	NaN	2124.9	30	0	280.44	0.106			+	25573	LQELQRDTL	9	53	558.3070899872863	1114.5996270413725	2	558.3064575195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LQELQRDTL_	REV__ENSG00000154237|ENST00000388948|LRRK1;REV__ENST00000525284.5_1_15:101565016-101602660:+|nuORF;REV__ENST00000531270.5_1_15:101565016-101589971:+|nuORF	47.95952297671804	0.32689736945648856	3				NaN	NaN	0	NaN	5111	4096	9207
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9210	28.53	NaN	2027.4	30	0	280.87	0.106	+			26605	LTYEFVKQK	9	53	578.3240870558534	NaN	0	578.3236083984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LTYEFVKQK_	ENSG00000179222|ENST00000326587|MAGED1;ENST00000494718.5_1_X:51641614-51641740:+|nuORF;MAGED1|p.P628Rfs*18|1|0.09|ENSG00000179222|chrX:51900215-51900215|C/-|frameshift_variant;nc|ENSG00000179222|Q9Y5V3-2|MAGED1	112.41091882917199	0.007519870935348052	3				NaN	NaN	0	NaN	5112	4096	9207
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9211	28.532	NaN	1026.9	30	0	159.96	0.036				-1	LFCMLMLI	8	39	528.7703857421875	NaN	0	528.7703857421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_LFC(Carbamidomethyl (C))M(Oxidation (M))LMLI_	tr|U7T0X3|U7T0X3_FUSNUDUF1275domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00713PE=4SV=1	43.626045697637714	1.7418937515398478	3				NaN	NaN	0	NaN	5113	4096	9207
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9218	28.55	NaN	2543.8	30	0	415.71	0.215				-1	 	0	50	329.2186457480359	656.4227385628718	2	329.21820068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5117	4099	9217
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9219	28.553	NaN	1825.7	30	0	192.01	0.037	+			9470	EKQLQQELL	9	42	564.81725640668	1127.61995988016	2	564.8172607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EKQLQQELL_	ENSG00000048052|ENST00000686413|HDAC9;ENST00000461159.6_1_7:18330122-18868840:+|nuORF;HDAC9|p.D553Mfs*46|1|0.4|ENSG00000048052|chr7:18666406-18666412|CAGTGGA/-|frameshift_variant;HDAC9|p.R42H|1|0.05|ENSG00000048052|chr7:18585383-18585383|G/A|missense_variant;HDAC9|p.V41D|1|0.19|ENSG00000048052|chr7:18585380-18585380|T/A|missense_variant;nc|ENSG00000048052|Q9UKV0-10|HDAC9;nc|ENSG00000048052|Q9UKV0-11|HDAC9;nc|ENSG00000048052|Q9UKV0-2|HDAC9;nc|ENSG00000048052|Q9UKV0-3|HDAC9;nc|ENSG00000048052|Q9UKV0-4|HDAC9;nc|ENSG00000048052|Q9UKV0-5|HDAC9;nc|ENSG00000048052|Q9UKV0-6|HDAC9;nc|ENSG00000048052|Q9UKV0-8|HDAC9;nc|ENSG00000048052|Q9UKV0-9|HDAC9;nc|ENSG00000048052|Q9UKV0|HDAC9	24.519189625965996	0.574102787014149	3				NaN	NaN	0	NaN	5118	4099	9217
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9230	28.578	NaN	1912.3	30	0	133.76	0.214	+			28121	NAIKESYDY	9	55	551.7566241814496	1101.4986954296992	2	551.75634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAIKESYDY_	EED|p.H305Qfs*14|1|0.09|ENSG00000074266|chr11:86268500-86268501|-/AGACATAC|frameshift_variant;ENSG00000074266|ENST00000263360|EED;ENST00000525244.5_1_11:85956313-85988207:+|nuORF;nc|ENSG00000074266|O75530-2|EED;nc|ENSG00000074266|O75530-3|EED	65.46538089061403	0.16805504838372562	3				NaN	NaN	0	NaN	5126	4102	9229
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9231	28.582	NaN	976.42	30	0	346.87	0.106	+			37864	SNPPPQDTL	9	31	484.73830636814273	967.4620598030855	2	484.7373352050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SNPPPQDTL_	ENSG00000100593|ENST00000342219|ISM2;nc|ENSG00000100593|Q6H9L7-3|ISM2;nc|ENSG00000100593|Q6H9L7-5|ISM2	23.52269567125451	0.5834155526130771	3				NaN	NaN	0	NaN	5127	4102	9229
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9232	28.584	NaN	1802.4	30	0	278.31	0.037			+	-1	KSDQIKLMSP	10	57	581.8095131488494	1161.6044733644987	2	582.3110961914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_KSDQIKLM(Oxidation (M))SP_	REV__ENST00000394421.6_1_5:145878115-145878166:+|nuORF	31.634271133179894	0.6214930414500597	3				NaN	NaN	0	NaN	5128	4102	9229
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9267	28.673	NaN	1529.6	30	0	410.98	0.142	+			50082	WGFKFGVA	8	38	456.2425010577155	910.470449182231	2	456.24188232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WGFKFGVA_	ENST00000263620.3_19:974543-975197:+|nuORF	39.021493756699265	0.6623843612266921	3				NaN	NaN	0	NaN	5151	4114	9266
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9277	28.697	NaN	1025.9	30	0	140.93	0.214	+			23342	KYTEGVQSL	9	41	512.7695480985448	1023.5245432638895	2	512.7695922851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KYTEGVQSL_	ENSG00000092201|ENST00000216297|SUPT16H;ENST00000537175.1_1_12:16552211-16552709:-|nuORF	65.15724298150197	0.17062369902793603	3				NaN	NaN	0	NaN	5158	4117	9276
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9278	28.701	NaN	1297.4	30	0	144.87	0.106	+			26845	LVVLKSWY	8	47	336.5344053180933	NaN	0	336.5343017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LVVLKSWY_	ENSG00000172689|ENST00000308287|MS4A10;MS4A10|p.A99Lfs*12|1|0.12|ENSG00000172689|chr11:60791080-60791080|G/-|frameshift_variant	19.359975847455235	1.7418937515398478	3				NaN	NaN	0	NaN	5159	4117	9276
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9279	28.703	NaN	1123.6	30	0	286.29	0.037			+	2023	AKNIGTKYEE	10	29	576.7958998607867	NaN	0	576.7960205078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AKNIGTKYEE_	REV__CWF19L1|p.K61N|1|0.24|ENSG00000095485|chr10:100260970-100260970|C/A|missense_variant	13.45404412870281	0.4201028297492154	3				NaN	NaN	0	NaN	5160	4117	9276
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9286	28.719	NaN	1133.1	30	0	107.71	0.144				-1	MSSTDSPLIL	10	42	540.269775390625	NaN	0	540.269775390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))SSTDSPLIL_	ENST00000235290.7_1_13:50618334-50618430:-|nuORF	29.14955571784316	0.4044631218331212	3				NaN	NaN	0	NaN	5164	4120	9285
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9298	28.746	NaN	1795.6	30	0	280.56	0.145	+			4958	ATQTQFFHVK	10	40	603.8174211341421	NaN	0	603.817626953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATQTQFFHVK_	ENSG00000163564|ENST00000368140|PYHIN1;ENSG00000163565|ENST00000295809|IFI16;ENST00000485134.1_1_1:158911778-158914889:+|nuORF;ENST00000493884.5_1_1:158984458-159022017:+|nuORF;nc|ENSG00000163564|Q6K0P9-2|PYHIN1;nc|ENSG00000163564|Q6K0P9-3|PYHIN1;nc|ENSG00000163564|Q6K0P9-4|PYHIN1;nc|ENSG00000163565|Q16666-2|IFI16;nc|ENSG00000163565|Q16666-3|IFI16;nc|ENSG00000163565|Q16666-6|IFI16;nc|ENSG00000163565|Q16666-8|IFI16	36.527901853580055	0.380236283444939	3				NaN	NaN	0	NaN	5173	4123	9297
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9309	28.773	NaN	1829.8	30	0	226.81	0.214	+			14086	GSLFLRTPK	9	49	509.80592506271034	1017.5972971922207	2	509.8048400878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSLFLRTPK_	ENSG00000134333|ENST00000422447|LDHA;ENST00000437325.2_1_1:235901419-235901638:+|nuORF;ENST00000494573.6_1_11:18418389-18421097:+|nuORF;LDHA|p.E176Kfs*8|1|0.28|ENSG00000134333|chr11:18402943-18402943|G/-|frameshift_variant;LDHA|p.W227Tfs*16|1|0.06|ENSG00000134333|chr11:18403779-18403780|-/AC|frameshift_variant;nc|ENSG00000134333|P00338-2|LDHA;nc|ENSG00000134333|P00338-3|LDHA;nc|ENSG00000134333|P00338-4|LDHA;nc|ENSG00000134333|P00338-5|LDHA	99.01295224348159	0.040209060045561164	3				NaN	NaN	0	NaN	5181	4126	9308
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9310	28.777	NaN	1805.3	30	0	387.58	0.039	+			26461	LTIQSGEQPYK	11	49	632.331701092154	1262.648849251108	2	632.3320922851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LTIQSGEQPYK_	ENSG00000168653|ENST00000372969|NDUFS5	60.1669710687717	0.32196467475348695	3				NaN	NaN	0	NaN	5182	4126	9308
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9332	28.829	NaN	2496.2	30	0	304.33	0.145	+			41042	SVIDTSTIVRK	11	68	609.8562690641556	NaN	0	609.8563232421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVIDTSTIVRK_	ENSG00000115808|ENST00000263918|STRN;ENST00000495595.1_1_2:37111179-37129881:-|nuORF;nc|ENSG00000115808|O43815-2|STRN;STRN|p.V346*|1|0.24|ENSG00000115808|chr2:36886722-36886722|C/-|frameshift_variant	73.90049950687481	0.11200661349279573	3				NaN	NaN	0	NaN	5198	4132	9331
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9343	28.856	NaN	1310.4	30	0	117.17	0.143			+	21001	KKGRQKDK	8	44	515.3130702103311	1028.6115874874622	2	515.3129272460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))KKGRQKDK_	REV__tr|U7SPR2|U7SPR2_FUSNUHotDogACOT-typedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01870PE=4SV=1	40.77816245573522	0.6514838689002179	3				NaN	NaN	0	NaN	5206	4135	9342
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9357	28.887	NaN	5113.8	30	0	1202.2	0.214	+			1788	AIFGGFKSK	9	60	477.773915312566	953.533277691932	2	477.77374267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AIFGGFKSK_	ENSG00000248144|ENST00000515683|ADH1C	93.1432384553994	0.056003526918089595	3				NaN	NaN	0	NaN	5217	4138	9356
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9358	28.89	NaN	1862.6	30	0	168.71	0.037	+			38028	SPNSLTLANIV	11	50	564.81725640668	1127.61995988016	2	564.8165283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SPNSLTLANIV_	ENST00000477982.2_1_13:77575078-77575330:-|nuORF	38.753607047826485	0.5749975102143227	3				NaN	NaN	0	NaN	5218	4138	9356
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9380	28.941	NaN	1819.3	30	0	415.56	0.145			+	50902	YGDPYPLAIVN	11	36	611.310113248075	NaN	0	611.309814453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YGDPYPLAIVN_	REV__tr|U7SM47|U7SM47_FUSNUUDP-3-O-acyl-N-acetylglucosaminedeacetylaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=lpxCPE=3SV=1	24.519189625965996	0.45614437233802635	3				NaN	NaN	0	NaN	5234	4144	9379
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9389	28.965	NaN	1361.1	30	0	473.63	0.214			+	13095	GFYPGDSSM	9	45	480.6937734458525	NaN	0	480.6932067871094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GFYPGDSSM_	REV__ENST00000406711.5_2_2:37425806-37426888:+|nuORF	20.481830146152948	0.3676602570045296	3				NaN	NaN	0	NaN	5240	4147	9388
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9390	28.968	NaN	1705.5	30	0	246.7	0.036	+			31369	QKDPDIGDLL	10	55	557.2931518554688	NaN	0	557.2931518554688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QKDPDIGDLL_	ENSG00000241973|ENST00000255882|PI4KA;ENST00000466772.5_1_22:21065465-21081626:-|nuORF;ENST00000492581.5_1_22:21067427-21075805:-|nuORF;nc|ENSG00000241973|P42356-2|PI4KA	33.921630207806714	0.38879399011744475	3				NaN	NaN	0	NaN	5241	4147	9388
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9403	28.995	NaN	2392.5	30	0	616.05	0.144	+			22390	KTIIFVETK	9	53	539.8290305664635	NaN	0	539.8292846679688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTIIFVETK_	ENSG00000100201|ENST00000403230|DDX17;ENST00000216019.11_1_22:38888049-38902242:-|nuORF;ENST00000432525.5_1_22:38886367-38903636:-|nuORF;ENST00000497196.5_1_22:38889517-38891019:-|nuORF;nc|ENSG00000100201|Q92841-1|DDX17;nc|ENSG00000100201|Q92841-2|DDX17;nc|ENSG00000100201|Q92841-3|DDX17	70.39856735676683	0.10496893946726124	3				NaN	NaN	0	NaN	5251	4150	9402
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9415	29.023	NaN	7447.8	30	0	1284.6	0.145			+	-1	KMHLFRCL	8	82	368.8649537612441	1103.5730318839323	3	368.8647155761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_KMHLFRC(Carbamidomethyl (C))L_	REV__ENSG00000153107|ENST00000341068|ANAPC1;REV__ENST00000454465.1_1_2:87398353-87423749:+|nuORF	65.80317337860623	0.44433089765398776	3				NaN	NaN	0	NaN	5260	4153	9414
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9429	29.062	NaN	4202.3	30	0	348.77	0.145	+			49660	VYISEHEHF	9	70	580.7724393467588	1159.5303257603175	2	580.7726440429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYISEHEHF_	ENSG00000104853|ENST00000337392|CLPTM1;nc|ENSG00000104853|O96005-3|CLPTM1;nc|ENSG00000104853|O96005-4|CLPTM1	139.97047562133406	0.010493916756945389	3				NaN	NaN	0	NaN	5268	4159	9428
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9441	29.089	NaN	1979.2	30	0	357.89	0.214	+			20018	KEILGTAQSV	10	47	523.2983627844917	1044.5821726357833	2	523.2986450195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEILGTAQSV_	ENSG00000197958|ENST00000361436|RPL12;ENST00000460355.1_1_2:204055847-204055997:+|nuORF;nc|ENSG00000197958|P30050-2|RPL12	57.148748479083515	0.39177200545522445	3				NaN	NaN	0	NaN	5277	4162	9440
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9442	29.093	NaN	921.81	30	0	145.31	0.036	+			23111	KVVNLPFEK	9	35	537.3212447513391	1072.6279365694782	2	537.3214111328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVVNLPFEK_	ENST00000604687.1_1_21:10475839-10476034:-|nuORF	22.561587123415745	0.5923976227790123	3				NaN	NaN	0	NaN	5278	4162	9440
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9451	29.113	NaN	1337.8	30	0	215.5	0.143	+			14087	GSLFLRTPK	9	46	509.80592506271034	1017.5972971922207	2	509.8061218261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSLFLRTPK_	ENSG00000134333|ENST00000422447|LDHA;ENST00000437325.2_1_1:235901419-235901638:+|nuORF;ENST00000494573.6_1_11:18418389-18421097:+|nuORF;LDHA|p.E176Kfs*8|1|0.28|ENSG00000134333|chr11:18402943-18402943|G/-|frameshift_variant;LDHA|p.W227Tfs*16|1|0.06|ENSG00000134333|chr11:18403779-18403780|-/AC|frameshift_variant;nc|ENSG00000134333|P00338-2|LDHA;nc|ENSG00000134333|P00338-3|LDHA;nc|ENSG00000134333|P00338-4|LDHA;nc|ENSG00000134333|P00338-5|LDHA	59.93077597824379	0.21419174904018318	3				NaN	NaN	0	NaN	5284	4165	9450
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9470	29.161	NaN	2554.1	30	0	580	0.142	+			14786	GTLASSFAR	9	50	455.2432199119239	908.4718868906479	2	455.242919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTLASSFAR_	ENST00000563117.5_1_16:20817227-20817782:-|nuORF;ENST00000565884.5_1_16:20817227-20817407:-|nuORF	127.46168284122857	0.016682644177004526	3				NaN	NaN	0	NaN	5297	4171	9469
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9481	29.188	NaN	3319.6	30	0	576	0.214	+			36909	SIIETLRQK	9	62	544.3275185343566	1086.6404841355131	2	544.3271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIIETLRQK_	ENSG00000080824|ENST00000216281|HSP90AA1;ENST00000436135.1_1_1:158495283-158495625:+|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1	115.49404669440601	0.023927554121326553	3				NaN	NaN	0	NaN	5305	4174	9480
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9482	29.192	NaN	1215.8	30	0	245.53	0.037				-1	ESKLPVLCCT	10	35	575.2862548828125	NaN	0	575.2862548828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_ESKLPVLC(Carbamidomethyl (C))CT_	ENSG00000179889|ENST00000396410|PDXDC1;ENST00000566633.1_1_16:15120373-15125764:+|nuORF;ENST00000570001.5_1_16:15069056-15125764:+|nuORF;nc|ENSG00000179889|Q6P996-3|PDXDC1;nc|ENSG00000179889|Q6P996-4|PDXDC1;nc|ENSG00000179889|Q6P996-5|PDXDC1;PDXDC1|p.P706Tfs*3|1|0.06|ENSG00000179889|chr16:15036023-15036024|-/A|frameshift_variant	31.529811441608018	0.39664753963064203	3				NaN	NaN	0	NaN	5306	4174	9480
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9495	29.219	NaN	1530	30	0	209.73	0.141			+	-1	MVSPQAVP	8	46	422.7133059289704	NaN	0	422.7132568359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))VSPQAVP_	REV__ENSG00000175662|ENST00000379504|TOM1L2;REV__nc|ENSG00000175662|Q6ZVM7-2|TOM1L2;REV__nc|ENSG00000175662|Q6ZVM7-3|TOM1L2;REV__nc|ENSG00000175662|Q6ZVM7-4|TOM1L2;REV__nc|ENSG00000175662|Q6ZVM7-5|TOM1L2	50.0245360154114	1.7418937515398478	3				NaN	NaN	0	NaN	5316	4177	9494
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9500	29.235	NaN	1554	30	0	215.69	0.144	+			45486	TYDKMWAF	8	51	531.2431975177846	NaN	0	531.2432250976562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TYDKMWAF_	ENSG00000164418|ENST00000369134|GRIK2;GRIK2|p.G830Efs*34|1|0.07|ENSG00000164418|chr6:102055506-102055507|-/AA|frameshift_variant;nc|ENSG00000164418|Q13002-2|GRIK2;nc|ENSG00000164418|Q13002-4|GRIK2;nc|ENSG00000164418|Q13002-5|GRIK2;nc|ENSG00000164418|Q13002-6|GRIK2	49.44154591367651	1.7418937515398478	3				NaN	NaN	0	NaN	5318	4180	9499
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9521	29.286	NaN	2464	30	0	754.76	0.214			+	9212	EGRVQPML	8	34	465.24787855922335	NaN	0	465.2477111816406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EGRVQPML_	REV__nc|ENSG00000125731|Q9BRG2-2|SH2D3A	20.94693142431847	1.7418937515398478	3				NaN	NaN	0	NaN	5333	4186	9520
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9522	29.289	NaN	2380.1	30	0	361.52	0.035	+			3824	ATAIGMPVEK	10	50	508.7762278416442	NaN	0	508.77655029296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATAIGMPVEK_	ENSG00000109736|ENST00000355443|MFSD10;ENST00000509676.1_1_4:2934766-2935650:-|nuORF;MFSD10|p.S111Gfs*48|1|0.44|ENSG00000109736|chr4:2933125-2933147|GGGCGCCTCCCCAAGCAGTCAGA/-|frameshift_variant	37.50817390946774	0.3770175549877019	3				NaN	NaN	0	NaN	5334	4186	9520
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9534	29.315	NaN	2785.3	30	0	294.53	0.214	+			22855	KVKDTTFR	8	58	497.7880443724872	993.5615358117744	2	497.7875061035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVKDTTFR_	ENSG00000157578|ENST00000288350|LCA5L	53.351449002276354	0.5676011784961348	3				NaN	NaN	0	NaN	5343	4189	9533
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9535	29.318	NaN	1578	30	0	245.31	0.035				-1	 	0	44	324.68947838524065	NaN	0	324.6892395019531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5344	4189	9533
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9541	29.334	NaN	2767.9	30	0	676.39	0.143			+	47190	VLVNLTHVI	9	63	336.54596586378767	NaN	0	336.5461120605469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VLVNLTHVI_	REV__ENSG00000101353|ENST00000343811|MROH8;REV__MROH8|p.F768Lfs*38|1|0.13|ENSG00000101353|chr20:37120510-37120510|A/-|frameshift_variant;REV__MROH8|p.N894Tfs*7|1|0.08|ENSG00000101353|chr20:37114081-37114081|T/-|frameshift_variant;REV__nc|ENSG00000101353|Q9H579-2|MROH8;REV__nc|ENSG00000101353|Q9H579|MROH8	26.79610172149135	0.34227917631780574	3				NaN	NaN	0	NaN	5347	4192	9540
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9559	29.381	NaN	1157.7	30	0	437.97	0.214			+	540	ADCSHPAL	8	27	407.1823765479339	812.3502001626679	2	407.1822814941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ADCSHPAL_	REV__MROH2B|p.T942A|1|0.2|ENSG00000171495|chr5:41017910-41017910|T/C|missense_variant	46.76643321282427	0.6143254112625767	3				NaN	NaN	0	NaN	5359	4198	9558
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9560	29.385	NaN	1442.8	30	0	243.41	0.034	+			36175	SELIKKPSG	9	42	479.78171049278006	957.5488680523601	2	479.78167724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SELIKKPSG_	ENST00000484945.5_1_3:75472114-75480048:-|nuORF;ENST00000588728.5_1_8:8088403-8094732:+|nuORF;nc|ENSG00000118894|Q96G04-2|EEF2KMT	52.936696900407355	0.27249468807391813	3				NaN	NaN	0	NaN	5360	4198	9558
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9572	29.41	NaN	2381.7	30	0	265.89	0.144	+			39728	STISIFHCK	9	63	546.7790616027498	1091.5435702722996	2	546.7772216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_STISIFHC(Carbamidomethyl (C))K_	ENST00000554584.5_1_14:64375879-64407376:+|nuORF	110.11987700582712	0.028875675806141952	3				NaN	NaN	0	NaN	5369	4201	9571
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9585	29.439	NaN	3735.4	30	0	574.88	0.145	+			14846	GTLMWHQMK	9	56	566.2755375090529	1130.5365220849058	2	566.2747802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTLMWHQMK_	ENST00000346169.6_1_3:184032401-184033585:+|nuORF;ENST00000352767.7_2_3:184032446-184033585:+|nuORF	90.36981228632155	0.0638227155548745	3				NaN	NaN	0	NaN	5379	4204	9584
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9594	29.461	NaN	11148	30	0	854.58	0.213	+			35130	SAHVETGYKLK	11	86	616.8348024877432	1231.6550520422863	2	616.835205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAHVETGYKLK_	ENST00000452533.6_1_12:32896368-32896542:+|nuORF	58.22992032128504	0.3392555181951113	3				NaN	NaN	0	NaN	5385	4207	9593
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9595	29.465	NaN	2597.2	30	0	1474	0.036	+			48125	VSVLKGQVYI	10	36	553.3348532297372	1104.6551535262743	2	553.3336791992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSVLKGQVYI_	ENSG00000130707|ENST00000352480|ASS1;ENST00000372386.6_1_9:133355254-133376405:+|nuORF	27.882242232435846	0.6521336255503853	3				NaN	NaN	0	NaN	5386	4207	9593
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9616	29.515	NaN	896.51	30	0	116.58	0.142	+			42793	TEAKLVSAAG	10	34	473.7636920391474	NaN	0	473.76373291015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEAKLVSAAG_	ENSG00000135100|ENST00000257555|HNF1A;HNF1A|p.H500Tfs*31|1|0.15|ENSG00000135100|chr12:120997658-120997658|C/-|frameshift_variant;HNF1A|p.P379Lfs*5|3|0.42|ENSG00000135100|chr12:120996564-120996564|C/-|frameshift_variant;nc|ENSG00000135100|P20823-2|HNF1A;nc|ENSG00000135100|P20823-3|HNF1A;nc|ENSG00000135100|P20823-6|HNF1A;nc|ENSG00000135100|P20823-7|HNF1A;nc|ENSG00000135100|P20823|HNF1A	32.81241826257853	0.3924360933802784	3				NaN	NaN	0	NaN	5401	4213	9615
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9638	29.569	NaN	10599	30	0	3999.8	0.214	+			19196	IYTSSVNRL	9	62	526.7903856516062	1051.5662183700124	2	526.7905883789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IYTSSVNRL_	ENSG00000184432|ENST00000333188|COPB2;nc|ENSG00000184432|P35606-2|COPB2	101.25262130126117	0.03792372629710479	3				NaN	NaN	0	NaN	5417	4219	9637
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9639	29.573	NaN	1362.7	30	0	393.64	0.037			+	-1	ATESDMTEEE	10	42	579.2098897920138	1156.4052266508274	2	579.2100219726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_ATESDM(Oxidation (M))TEEE_	REV__BACH2|p.P414Lfs*18|1|0.19|ENSG00000112182|chr6:89950867-89950867|C/-|frameshift_variant;REV__BACH2|p.Q274Afs*3|2|0.33|ENSG00000112182|chr6:89951286-89951287|-/C|frameshift_variant;REV__ENSG00000112182|ENST00000257749|BACH2	15.641811463095205	0.7369665665077569	3				NaN	NaN	0	NaN	5418	4219	9637
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9660	29.623	NaN	2521.7	30	0	1003.2	0.214	+			32824	RAYVTLNGK	9	46	511.2922914552415	NaN	0	511.2915954589844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RAYVTLNGK_	ENSG00000137760|ENST00000428149|ALKBH8;nc|ENSG00000137760|Q96BT7-2|ALKBH8;nc|ENSG00000137760|Q96BT7-3|ALKBH8;nc|ENSG00000137760|Q96BT7-4|ALKBH8	19.996771675451527	0.3693019437812985	3				NaN	NaN	0	NaN	5433	4225	9659
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9661	29.627	NaN	2306.5	30	0	512.45	0.036				-1	CGLEPVTTLS	10	40	538.7694714151459	NaN	0	538.7692260742188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_C(Carbamidomethyl (C))GLEPVTTLS_	ENST00000474777.1_1_20:36774930-36793648:-|nuORF;nc|ENSG00000198959|P21980-3|TGM2	19.996771675451527	0.4201028297492154	3				NaN	NaN	0	NaN	5434	4225	9659
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9673	29.652	NaN	2258.6	30	0	454.19	0.143				-1	 	0	49	494.26079803410005	493.25352156750006	1	494.26239013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5443	4228	9672
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9684	29.679	NaN	1003.5	30	0	105.24	0.14				-1	 	0	38	401.2166532040361	800.4187534748722	2	401.217041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5451	4231	9683
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9698	29.71	NaN	1888.8	30	0	131.02	0.143			+	-1	PCWIALAAK	9	49	515.2833484993034	1028.5521440654068	2	515.78662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_PC(Carbamidomethyl (C))WIALAAK_	REV__ENSG00000145777|ENST00000344895|TSLP;REV__nc|ENSG00000145777|Q969D9-2|TSLP	54.76467175910256	0.25725661233076036	3				NaN	NaN	0	NaN	5462	4234	9697
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9716	29.757	NaN	1233.8	30	0	638.07	0.142			+	48126	VSVNAATVKA	10	32	480.2795878475659	958.5446227619318	2	480.7802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSVNAATVKA_	REV__LAMC1|p.A1158T|1|0.4|ENSG00000135862|chr1:183130535-183130535|G/A|missense_variant	23.52269567125451	0.6877354443478558	3				NaN	NaN	0	NaN	5474	4240	9715
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9726	29.782	NaN	1469.4	30	0	173.71	0.214	+			39131	SSVFLAIKK	9	45	496.81083833955086	991.6071237459017	2	496.8105163574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSVFLAIKK_	ENST00000274030.10_1_4:120160492-120160642:+|nuORF	29.14955571784316	0.5308295550522326	3				NaN	NaN	0	NaN	5481	4243	9725
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9727	29.786	NaN	1740.8	30	0	204.77	0.036				-1	ISFPATGCQK	10	49	554.7764274349348	1107.5383019366695	2	554.7759399414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_ISFPATGC(Carbamidomethyl (C))QK_	ENSG00000137154|ENST00000380394|RPS6	29.170058357718403	0.6416167986984785	3				NaN	NaN	0	NaN	5482	4243	9725
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9739	29.811	NaN	1548.9	30	0	221.67	0.145			+	30114	PRPHPSPPHC	10	52	562.7740029442785	NaN	0	562.7747802734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PRPHPSPPHC_	REV__ENST00000536957.5_1_12:120661994-120662090:-|nuORF	34.172542307311794	0.38797011891751465	3				NaN	NaN	0	NaN	5491	4246	9738
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9757	29.858	NaN	1577.3	30	0	158.59	0.143			+	-1	ICDCPLPAAG	10	36	508.7306708448378	1015.4467887564756	2	508.73046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_ICDC(Carbamidomethyl (C))PLPAAG_	REV__ENST00000325327.3_1_19:2429436-2429694:-|nuORF	53.351449002276354	0.42630798468005626	3				NaN	NaN	0	NaN	5503	4252	9756
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9797	29.958	NaN	3706.3	30	0	483.82	0.214	+			14581	GTFSTVTSTVK	11	59	564.3013741400233	1126.5881953468465	2	564.300537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTFSTVTSTVK_	ENSG00000182934|ENST00000332118|SRPRA;nc|ENSG00000182934|P08240-2|SRPRA	96.66504779109242	0.07148984068916604	3				NaN	NaN	0	NaN	5531	4264	9796
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9798	29.962	NaN	2071.5	30	0	297.96	0.106			+	31856	QPVKDQLERL	10	51	613.3486938476562	NaN	0	613.3486938476562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QPVKDQLERL_	REV__ENSG00000081181|ENST00000261783|ARG2;REV__ENST00000557120.5_1_14:68086664-68113456:+|nuORF	28.5767321226876	0.40634399112407993	3				NaN	NaN	0	NaN	5532	4264	9796
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9799	29.964	NaN	1099.4	30	0	159.75	0.106			+	31074	QFDQIAASI	9	33	496.75734644634775	NaN	0	496.7578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QFDQIAASI_	REV__ENSG00000138688|ENST00000679879|BLTP1;REV__KIAA1109-FSIP2|1|fusion;REV__nc|ENSG00000138688|Q2LD37-2|BLTP1;REV__nc|ENSG00000138688|Q2LD37-4|BLTP1;REV__nc|ENSG00000138688|Q2LD37-6|BLTP1;REV__nc|ENSG00000138688|Q2LD37-7|BLTP1;REV__nc|ENSG00000138688|Q2LD37|BLTP1	36.446750945000026	0.29355505452396785	3				NaN	NaN	0	NaN	5533	4264	9796
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9800	29.966	NaN	1094.1	30	0	272.89	0.036			+	51056	YLISSLVTAS	10	30	527.294189453125	NaN	0	527.294189453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YLISSLVTAS_	REV__ENST00000421367.6_1_10:101911593-101911725:-|nuORF	27.882242232435846	0.4086243523356342	3				NaN	NaN	0	NaN	5534	4264	9796
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9825	30.022	NaN	13074	30	0	3682.2	0.214				-1	 	0	65	401.2166532040361	800.4187534748722	2	401.2162170410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5553	4270	9824
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9826	30.025	NaN	2006.2	30	0	320.4	0.106	+			42719	TDFQTHTSL	9	55	525.249088485308	NaN	0	525.2491455078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TDFQTHTSL_	ENSG00000144589|ENST00000456909|STK11IP;ENST00000475396.5_1_2:220462865-220474366:+|nuORF;STK11IP|p.E522Rfs*80|1|0.11|ENSG00000144589|chr2:219608354-219608354|G/-|frameshift_variant;STK11IP|p.L552Cfs*50|1|0.22|ENSG00000144589|chr2:219608596-219608596|C/-|frameshift_variant	51.19269402634007	0.19847346126499396	3				NaN	NaN	0	NaN	5554	4270	9824
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9827	30.027	NaN	3857.1	30	0	385.54	0.036	+			40737	SVCVLDLRK	9	60	545.3082830798999	1088.6020132265996	2	545.3089599609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SVC(Carbamidomethyl (C))VLDLRK_	ENSG00000101849|ENST00000645353|TBL1X;ENSG00000177565|ENST00000457928|TBL1XR1;nc|ENSG00000101849|O60907-2|TBL1X;TBL1X|p.G568S|1|0.45|ENSG00000101849|chrX:9714998-9714998|G/A|missense_variant	104.0567914643314	0.03506238181059741	3				NaN	NaN	0	NaN	5555	4270	9824
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9850	30.079	NaN	1274.8	30	0	129.88	0.143			+	950	AEIVEKKNV	9	54	515.3002319335938	NaN	0	515.3002319335938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEIVEKKNV_	REV__ENST00000474162.1_1_5:60686735-60687614:-|nuORF	45.97224482568171	0.23445038899310136	3				NaN	NaN	0	NaN	5572	4276	9849
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9858	30.101	NaN	2341.1	30	0	226.41	0.142			+	17876	IGALTGSTAL	10	51	452.26134623322906	902.5081395332581	2	452.2610168457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IGALTGSTAL_	REV__ENSG00000111843|ENST00000229563|TMEM14C;REV__ENST00000466421.5_1_6:10723434-10730896:+|nuORF	60.97194046774394	0.3570005369683776	3				NaN	NaN	0	NaN	5577	4279	9857
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9901	30.218	NaN	2463.3	30	0	323.94	0.214	+			48329	VTGAGKGI	8	61	351.71071386948347	NaN	0	351.7106628417969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTGAGKGI_	DCXR|p.V10L|1|0.48|ENSG00000169738|chr17:82037655-82037655|C/A|missense_variant;ENSG00000169738|ENST00000306869|DCXR;ENST00000578885.5_1_17:79994327-79995552:-|nuORF;ENST00000579334.5_1_17:79995052-79995552:-|nuORF;ENST00000580750.5_1_17:79994503-79995558:-|nuORF	26.79610172149135	1.7418937515398478	3				NaN	NaN	0	NaN	5605	4294	9900
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9902	30.222	NaN	2636.5	30	0	643.2	0.106	+			39960	STMGYMMAK	9	54	510.2216477327031	1018.4287425322062	2	510.22216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STMGYMMAK_	ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;ENST00000518337.1_1_8:74128289-74128592:-|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P	56.72105179125745	0.24094814563026265	3				NaN	NaN	0	NaN	5606	4294	9900
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9903	30.224	NaN	4160.5	30	0	528.18	0.106	+			23311	KYQAVTATL	9	54	497.7827125774459	993.5508722216919	2	497.7830505371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KYQAVTATL_	ENSG00000142541|ENST00000391857|RPL13A;ENST00000425147.1_1_21:26734448-26734742:+|nuORF;ENST00000478813.1_1_8:81177882-81177960:-|nuORF;nc|ENSG00000293056|Q6NVV1|RPL13AP3	85.16082228582465	0.07850854922700509	3				NaN	NaN	0	NaN	5607	4294	9900
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9904	30.226	NaN	2207.4	30	0	333.48	0.036			+	-1	QMAADLVEDT	10	47	554.7423267360656	NaN	0	554.7432861328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_QM(Oxidation (M))AADLVEDT_	REV__ENSG00000128294|ENST00000338754|TPST2;REV__TPST2|p.N333Tfs*17|2|0.26|ENSG00000128294|chr22:26536333-26536333|G/-|frameshift_variant	37.81151784470057	0.3760215235790741	3				NaN	NaN	0	NaN	5608	4294	9900
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9915	30.252	NaN	1788.7	30	0	166.85	0.144	+			12819	GENADSQIKL	10	53	537.7748690782676	1073.535185223335	2	537.775146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GENADSQIKL_	ENSG00000189060|ENST00000340857|H1-0;nc|ENSG00000189060|P07305-2|H1-0	66.96192283764107	0.30252237217063654	3				NaN	NaN	0	NaN	5616	4297	9914
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9931	30.286	NaN	5174.4	30	0	494.04	0.145				-1	 	0	79	622.353426888715	1242.69230084423	2	622.8568115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5629	4300	9930
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9943	30.313	NaN	2035.9	30	0	336.5	0.214	+			12494	GEEGDLKTSL	10	59	524.7613956545633	1047.5082383759266	2	524.7615966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEEGDLKTSL_	ENSG00000066135|ENST00000372396|KDM4A;KDM4A|p.K699Sfs*7|1|0.06|ENSG00000066135|chr1:43690902-43690902|A/-|frameshift_variant	49.46582953369473	0.46192220282894864	3				NaN	NaN	0	NaN	5638	4303	9942
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9944	30.317	NaN	1503.6	30	0	162.49	0.106			+	50070	WFYGIFWT	8	44	560.2691623222036	1118.523771711207	2	560.2694091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WFYGIFWT_	REV__POLR2B|p.A362Pfs*21|1|0.34|ENSG00000047315|chr4:57005423-57005423|A/-|frameshift_variant	37.028477286268924	0.6747514403204248	3				NaN	NaN	0	NaN	5639	4303	9942
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9945	30.319	NaN	1726.9	30	0	251.61	0.036				-1	SIAPWRFMS	9	42	555.7744232839723	1109.5342936347445	2	555.7763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_SIAPWRFM(Oxidation (M))S_	ENST00000407450.1_1_6:118774123-118774444:-|nuORF	17.364965105453717	0.6112419832031293	3				NaN	NaN	0	NaN	5640	4303	9942
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	9963	30.356	NaN	1566.2	30	0	331.89	0.143	+			39820	STLGYTISR	9	54	499.269575984614	996.524599036028	2	499.2689514160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STLGYTISR_	ENSG00000170464|ENST00000302060|DNAJC18	60.1669710687717	0.2122228167747824	3				NaN	NaN	0	NaN	5655	4306	9962
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10016	30.478	NaN	84646	30	0	74297	0.214				-1	 	0	87	223.06375122070312	NaN	0	223.06375122070312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5696	4318	10015
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10017	30.482	NaN	2194.9	30	0	440.75	0.036	+			4178	ATFLDPRYK	9	40	555.8010551550133	1109.5875573768265	2	555.8015747070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATFLDPRYK_	ENSG00000214717|ENST00000652001|ZBED1	32.81241826257853	0.4965981579233955	3				NaN	NaN	0	NaN	5697	4318	10015
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10028	30.506	NaN	2300.5	30	0	775.25	0.214	+			489	AAYLHVVKA	9	56	324.52728612532366	970.560028976171	3	324.52716064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAYLHVVKA_	ENST00000374232.7_1_9:115626678-115631377:+|nuORF	20.481830146152948	0.6112419832031293	3				NaN	NaN	0	NaN	5705	4321	10027
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10029	30.509	NaN	1854.8	30	0	277.86	0.106	+			20566	KFSPNTSQF	9	55	528.2609789613326	1054.5074049894652	2	528.2617797851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KFSPNTSQF_	BUB3|p.I231Gfs*30|1|0.05|ENSG00000154473|chr10:123162349-123162350|-/GGTAA|frameshift_variant;ENSG00000154473|ENST00000368865|BUB3;nc|ENSG00000154473|O43684-2|BUB3	80.45461616416974	0.09558281504443908	3				NaN	NaN	0	NaN	5706	4321	10027
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10030	30.511	NaN	2195.2	30	0	209.75	0.106	+			44294	TSAQTERVPLD	11	50	608.8123779296875	NaN	0	608.8123779296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TSAQTERVPLD_	ENSG00000159461|ENST00000290649|AMFR	47.95952297671804	0.32997419910078585	3				NaN	NaN	0	NaN	5707	4321	10027
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10031	30.513	NaN	1954.1	30	0	163	0.036	+			11347	FLEVEQGKR	9	50	553.3043910832495	1104.5942292332988	2	553.303955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FLEVEQGKR_	ENSG00000080200|ENST00000389622|CRYBG3	30.317721548370564	0.5199124245378496	3				NaN	NaN	0	NaN	5708	4321	10027
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10066	30.594	NaN	1222.8	30	0	86.497	0.144			+	3455	ASRIMKDLK	9	47	531.3125610351562	NaN	0	531.3125610351562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASRIMKDLK_	REV__ENSG00000185745|ENST00000371804|IFIT1;REV__IFIT1|p.K336Sfs*9|1|0.6|ENSG00000185745|chr10:89403276-89403276|A/-|frameshift_variant;REV__nc|ENSG00000185745|P09914-2|IFIT1	18.262085536374414	0.37517301184500873	3				NaN	NaN	0	NaN	5734	4330	10065
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10079	30.623	NaN	1798.7	30	0	209.6	0.145	+			19154	IYQKAFEHL	9	49	574.8092796590972	1147.6040063849944	2	574.8090209960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IYQKAFEHL_	BBS4|p.E506Vfs*5|1|0.05|ENSG00000140463|chr15:72737544-72737545|AA/-|frameshift_variant;ENSG00000140463|ENST00000268057|BBS4;nc|ENSG00000140463|Q96RK4-2|BBS4;nc|ENSG00000140463|Q96RK4-3|BBS4	65.46538089061403	0.16805504838372562	3				NaN	NaN	0	NaN	5744	4333	10078
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10114	30.718	NaN	3403	30	0	1755.4	0.215			+	40529	SVAAAALPQLG	11	48	333.194245962634	996.5609084881021	3	333.194091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVAAAALPQLG_	REV__ENST00000596809.5_1_19:41247612-41248383:-|nuORF	34.08650109265054	0.6322515996262609	3				NaN	NaN	0	NaN	5767	4345	10113
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10115	30.721	NaN	5618.9	30	0	577.1	0.041			+	-1	LEYAPDRSRRC	11	73	711.8483276367188	NaN	0	711.8483276367188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LEYAPDRSRRC(Carbamidomethyl (C))_	REV__ENSG00000140391|ENST00000267970|TSPAN3;REV__nc|ENSG00000140391|O60637-2|TSPAN3;REV__nc|ENSG00000140391|O60637-3|TSPAN3	31.634271133179894	0.4244354679066847	3				NaN	NaN	0	NaN	5768	4345	10113
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10127	30.747	NaN	3822.3	30	0	303.83	0.214				-1	 	0	68	546.314536395245	1090.61451985729	2	546.8156127929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5777	4348	10126
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10128	30.75	NaN	7048.1	30	0	1020.7	0.106			+	29588	PFNPLFFWVKH	11	70	716.3809479744035	1430.747343015607	2	716.382080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PFNPLFFWVKH_	REV__ENST00000534358.5_2_11:118394338-118394506:+|nuORF	19.1035232394073	0.7810393085260824	3				NaN	NaN	0	NaN	5778	4348	10126
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10129	30.752	NaN	2108.4	30	0	371.42	0.036	+			15194	GTSQLYVYR	9	52	543.7832246542578	NaN	0	543.78271484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTSQLYVYR_	CPSF1|p.A1319Pfs*42|2|0.23|ENSG00000071894|chr8:144393943-144393943|C/-|frameshift_variant;CPSF1|p.P950Lfs*6|1|0.13|ENSG00000071894|chr8:144396478-144396478|G/-|frameshift_variant;CPSF1|p.V640Wfs*20|1|0.36|ENSG00000071894|chr8:144398110-144398110|G/-|frameshift_variant;ENSG00000071894|ENST00000616140|CPSF1	65.46538089061403	0.1260090208616529	3				NaN	NaN	0	NaN	5779	4348	10126
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10156	30.812	NaN	2884.3	30	0	582.52	0.214	+			10793	FAHTNVESL	9	57	509.25377450277153	1016.4929960723431	2	509.25335693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FAHTNVESL_	ENSG00000167004|ENST00000300289|PDIA3;ENST00000434494.5_1_15:44038867-44063413:+|nuORF;ENST00000471856.1_1_1:146649692-146651075:+|nuORF	72.87924865735499	0.12833875048249987	3				NaN	NaN	0	NaN	5800	4354	10155
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10157	30.816	NaN	2861.7	30	0	1005.6	0.106			+	19739	KDVGGNEQRL	10	49	558.2938696428654	1114.5731863525307	2	558.2941284179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KDVGGNEQRL_	REV__ENSG00000143355|ENST00000367387|LHX9;REV__LHX9|p.P345Rfs*18|1|0.21|ENSG00000143355|chr1:197929096-197929096|C/-|frameshift_variant;REV__nc|ENSG00000143355|Q9NQ69-2|LHX9	32.75053402867276	0.6123771875927935	3				NaN	NaN	0	NaN	5801	4354	10155
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10158	30.818	NaN	1172.1	30	0	92.229	0.035				-1	PSVHCAAWV	9	49	513.7456847613918	NaN	0	513.3106689453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_PSVHC(Carbamidomethyl (C))AAWV_	ENST00000458001.2_1_13:114546204-114546789:+|nuORF	40.5726180659479	0.27166212580479165	3				NaN	NaN	0	NaN	5802	4354	10155
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10192	30.899	NaN	4612.7	30	0	621.52	0.214	+			14545	GTEFGGSIYQK	11	65	593.7905870442416	1185.5666211552832	2	593.7907104492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTEFGGSIYQK_	ENSG00000078668|ENST00000022615|VDAC3;ENSG00000165637|ENST00000332211|VDAC2;ENSG00000213585|ENST00000265333|VDAC1;ENST00000489906.5_1_5:133308464-133311792:-|nuORF;nc|ENSG00000078668|Q9Y277-2|VDAC3;nc|ENSG00000165637|P45880-1|VDAC2;nc|ENSG00000165637|P45880-2|VDAC2	148.6902309647307	7.269320322201812E-05	3				NaN	NaN	0	NaN	5827	4363	10191
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10193	30.903	NaN	1511.3	30	0	179.66	0.034	+			5720	AVFLGLARK	9	47	487.8113723990172	973.6081918648345	2	487.81121826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVFLGLARK_	ENSG00000160752|ENST00000368356|FDPS;ENST00000489324.1_1_1:155289446-155290397:+|nuORF;nc|ENSG00000160752|P14324-2|FDPS	31.954861631926434	0.5046124803899898	3				NaN	NaN	0	NaN	5828	4363	10191
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10214	30.955	NaN	1584.5	30	0	336.67	0.145	+			32096	QSFQTRFLL	9	45	570.3118837287993	NaN	0	570.3119506835938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QSFQTRFLL_	ENST00000392857.9_1_2:148696816-148705705:-|nuORF	26.063383197487333	0.34597851983111116	3				NaN	NaN	0	NaN	5843	4369	10213
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10229	30.987	NaN	808.17	30	0	200.79	0.142				-1	CFCYAAVH	8	34	485.6975120223925	969.380471111585	2	485.6973571777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_CFC(Carbamidomethyl (C))YAAVH_	OR14I1|p.S152C|1|0.12|ENSG00000189181|chr1:248681850-248681850|G/C|missense_variant	16.704963439144045	0.7946246187734944	3				NaN	NaN	0	NaN	5855	4372	10228
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10240	31.014	NaN	4568.9	30	0	1955.1	0.214	+			10605	EYLTKVDKL	9	68	554.8166726277799	1107.6187923223597	2	554.816650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EYLTKVDKL_	ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000141367|Q00610-2|CLTC	164.45504665044191	0.003713414289755139	3				NaN	NaN	0	NaN	5863	4375	10239
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10241	31.018	NaN	1231.3	30	0	188.73	0.035	+			7655	DKRSKALKA	9	38	508.8160186495327	NaN	0	508.81658935546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DKRSKALKA_	ENSG00000156411|ENST00000286953|ATP5MJ;ENST00000553449.1_1_14:104379005-104387837:-|nuORF;nc|ENSG00000156411|P56378-2|ATP5MJ	28.081489160057373	0.33578952234132536	3				NaN	NaN	0	NaN	5864	4375	10239
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10250	31.038	NaN	1834.8	30	0	353.36	0.146	+			26795	LVSESSDVLPK	11	43	587.3221721220508	NaN	0	587.3223876953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LVSESSDVLPK_	CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000425226.1_1_2:203705056-203705395:-|nuORF;ENST00000489121.1_1_3:137820322-137820643:-|nuORF;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	35.15202426646627	0.40875833226131825	3				NaN	NaN	0	NaN	5870	4378	10249
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10261	31.063	NaN	2662.4	30	0	323.8	0.214	+			33060	REKGITKAVK	10	55	565.3550595053352	NaN	0	565.3560791015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_REKGITKAVK_	tr|U7SEC4|U7SEC4_FUSNUElongationfactorTsOS=FusobacteriumnucleatumCTI-5OX=1316586GN=tsfPE=3SV=1	35.15202426646627	0.38475398474706135	3				NaN	NaN	0	NaN	5878	4381	10260
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10262	31.067	NaN	1215.5	30	0	375.02	0.034	+			30102	PRGSPASALV	10	31	477.77154541015625	NaN	0	477.77154541015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PRGSPASALV_	ENSG00000126243|ENST00000246529|LRFN3	24.519189625965996	0.41966695327750003	3				NaN	NaN	0	NaN	5879	4381	10260
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10275	31.094	NaN	1816.9	30	0	181.67	0.144				-1	 	0	59	546.314536395245	1090.61451985729	2	546.3140258789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	5889	4384	10274
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10284	31.116	NaN	1570.4	30	0	191.82	0.143	+			26985	LYMKNGQGF	9	50	529.260277004968	1056.5060010767359	2	529.2597045898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LYMKNGQGF_	ENSG00000116473|ENST00000369709|RAP1A;ENSG00000127314|ENST00000250559|RAP1B;ENST00000494982.1_1_1:112233982-112249293:+|nuORF;nc|ENSG00000127314|P61224-3|RAP1B;nc|ENSG00000127314|P61224-4|RAP1B;nc|ENSG00000254893|A6NIZ1|RAP1BL	63.30626980617807	0.18605348971131092	3				NaN	NaN	0	NaN	5895	4387	10283
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10292	31.136	NaN	1627.4	30	0	239.98	0.144	+			29965	PNSTNQMLY	9	36	534.2449470444426	1066.475341155685	2	534.2449951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PNSTNQMLY_	ENSG00000122145|ENST00000373296|TBX22;nc|ENSG00000122145|Q9Y458-2|TBX22	29.14955571784316	0.5308295550522326	3				NaN	NaN	0	NaN	5900	4390	10291
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10304	31.163	NaN	3146.7	30	0	539.55	0.214	+			23518	LAHLGSTL	8	49	406.23735597124505	810.4601590092901	2	406.2370300292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LAHLGSTL_	ENSG00000167595|ENST00000646935|PROSER3	65.89745868150666	0.44339748671293633	3				NaN	NaN	0	NaN	5909	4393	10303
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10305	31.167	NaN	4499	30	0	382.44	0.106			+	8733	EEESKQKSLPK	11	71	651.8478332733785	1301.6811136135568	2	651.8478393554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EEESKQKSLPK_	REV__ENSG00000128944|ENST00000249776|KNSTRN;REV__ENST00000560220.5_1_15:40676698-40685795:+|nuORF;REV__nc|ENSG00000128944|Q9Y448-2|KNSTRN;REV__nc|ENSG00000128944|Q9Y448-3|KNSTRN	47.95952297671804	0.44903247279694136	3				NaN	NaN	0	NaN	5910	4393	10303
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10306	31.169	NaN	2946.7	30	0	438.84	0.106	+			13773	GQGTFTKIFK	10	59	563.8167999281353	1125.6190469230705	2	563.8159790039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GQGTFTKIFK_	ENSG00000096968|ENST00000381652|JAK2	120.27252224102466	0.026944837168485097	3				NaN	NaN	0	NaN	5911	4393	10303
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10307	31.171	NaN	1208.6	30	0	132.23	0.035				-1	ASMKKVKSL	9	48	336.5343231716415	NaN	0	336.8686218261719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_ASM(Oxidation (M))KKVKSL_	ENST00000369426.9_1_1:119575536-119588262:-|nuORF	26.69291269510374	0.34280015626154364	3				NaN	NaN	0	NaN	5912	4393	10303
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10320	31.198	NaN	2536.3	30	0	441.9	0.214	+			49630	VYIDRVRSL	9	61	560.8280557721455	1119.6415586110909	2	560.8274536132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYIDRVRSL_	ENSG00000160789|ENST00000368300|LMNA;nc|ENSG00000160789|P02545-2|LMNA;nc|ENSG00000160789|P02545-3|LMNA;nc|ENSG00000160789|P02545-6|LMNA	45.97224482568171	0.3502073465782774	3				NaN	NaN	0	NaN	5922	4396	10319
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10321	31.202	NaN	2768.1	30	0	284.17	0.106	+			51553	YYEEQHPEL	9	53	604.2667328793486	1206.5189128254972	2	604.2673950195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YYEEQHPEL_	ENSG00000008517|ENST00000525643|IL32;nc|ENSG00000008517|P24001-3|IL32;nc|ENSG00000008517|P24001-4|IL32;nc|ENSG00000008517|P24001-5|IL32;nc|ENSG00000008517|P24001-6|IL32;nc|ENSG00000008517|P24001|IL32	90.60085204095205	0.06317133949006545	3				NaN	NaN	0	NaN	5923	4396	10319
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10322	31.204	NaN	1337.3	30	0	312.94	0.036	+			11299	FKNMVIVTT	9	42	526.7959594726562	NaN	0	526.7959594726562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FKNMVIVTT_	ENSG00000091106|ENST00000402280|NLRC4;NLRC4|p.F931Lfs*6|1|0.34|ENSG00000091106|chr2:32224755-32224755|A/-|frameshift_variant;NLRC4|p.L964Rfs*6|1|0.05|ENSG00000091106|chr2:32224657-32224658|-/ATAAAGTGTACTC|frameshift_variant;NLRC4|p.N539Tfs*8|1|0.29|ENSG00000091106|chr2:32250248-32250248|T/-|frameshift_variant	24.20275056022122	0.35506675290109213	3				NaN	NaN	0	NaN	5924	4396	10319
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10333	31.23	NaN	2112.2	30	0	704.5	0.214	+			23275	KYLEETNSL	9	39	548.7800084022267	NaN	0	548.7799682617188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KYLEETNSL_	ENSG00000198945|ENST00000361794|L3MBTL3;L3MBTL3|p.M479*|1|0.26|ENSG00000198945|chr6:130086161-130086161|A/-|frameshift_variant;nc|ENSG00000198945|Q96JM7-2|L3MBTL3	56.632244143249146	0.1636824227100298	3				NaN	NaN	0	NaN	5932	4399	10332
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10334	31.233	NaN	1128.2	30	0	294.98	0.034	+			12953	GESTSELIK	9	39	482.2531792687975	962.491805604395	2	482.2530517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GESTSELIK_	ENST00000470408.5_1_7:157015856-157060446:+|nuORF	45.97224482568171	0.3502073465782774	3				NaN	NaN	0	NaN	5933	4399	10332
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10353	31.28	NaN	3688.6	30	0	519.49	0.214	+			34788	RYLEGTSCI	9	62	549.7664615603331	1097.5183701874662	2	549.7662963867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_RYLEGTSC(Carbamidomethyl (C))I_	ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1	56.43379154798735	0.2433427591689151	3				NaN	NaN	0	NaN	5946	4405	10352
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10354	31.283	NaN	2346.9	30	0	265.97	0.036	+			35407	SAQSFFENK	9	62	529.2514221723386	1056.4882914114771	2	529.25146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAQSFFENK_	ENSG00000136758|ENST00000376016|YME1L1;nc|ENSG00000136758|Q96TA2-3|YME1L1;nc|ENSG00000136758|Q96TA2|YME1L1;YME1L1|p.N311Tfs*18|1|0.26|ENSG00000136758|chr10:27134053-27134053|T/-|frameshift_variant	89.02883481214508	0.06760336634167786	3				NaN	NaN	0	NaN	5947	4405	10352
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10367	31.311	NaN	1632.2	30	0	278.51	0.142				-1	NCCKNGQT	8	35	462.68662310096386	NaN	0	462.6864929199219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_NC(Carbamidomethyl (C))CKNGQT_	nc|ENSG00000292373|Q01113-3|IL9R	31.954861631926434	1.7418937515398478	3				NaN	NaN	0	NaN	5957	4408	10366
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10392	31.377	NaN	1381.4	30	0	241.36	0.141			+	23933	LDPTPSCH	8	36	435.1956959314271	868.3768389296542	2	435.19537353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LDPTPSCH_	REV__ENST00000584531.1_1_18:14962171-14965804:+|nuORF	35.200714571348534	0.6875396545722289	3				NaN	NaN	0	NaN	5973	4417	10391
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10415	31.431	NaN	2332.6	30	0	204.39	0.144	+			37071	SISDKFFQK	9	56	550.2936198502597	1098.5726867673193	2	550.2937622070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SISDKFFQK_	ENSG00000089472|ENST00000343002|HEPH;HEPH|p.R1086Qfs*4|1|0.29|ENSG00000089472|chrX:66266444-66266445|-/C|frameshift_variant;nc|ENSG00000089472|Q9BQS7-2|HEPH;nc|ENSG00000089472|Q9BQS7-3|HEPH;nc|ENSG00000089472|Q9BQS7-4|HEPH	93.1432384553994	0.056003526918089595	3				NaN	NaN	0	NaN	5990	4423	10414
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10427	31.458	NaN	2275.1	30	0	228.83	0.214	+			10635	EYNTVASKF	9	54	529.7610450233349	1057.5075371134697	2	529.76123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EYNTVASKF_	ENSG00000173193|ENST00000474629|PARP14;ENST00000475640.1_1_3:122437249-122439770:+|nuORF;nc|ENSG00000173193|Q460N5-1|PARP14;nc|ENSG00000173193|Q460N5-3|PARP14;nc|ENSG00000173193|Q460N5-4|PARP14;nc|ENSG00000173193|Q460N5-5|PARP14	72.87924865735499	0.12833875048249987	3				NaN	NaN	0	NaN	5999	4426	10426
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10428	31.462	NaN	1217.2	30	0	232.09	0.036	+			7561	DIAELWAVF	9	41	532.2747343110194	NaN	0	532.2747802734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DIAELWAVF_	ENSG00000133424|ENST00000397394|LARGE1;ENST00000476315.1_1_22:33959226-33960957:-|nuORF;LARGE|p.K385Qfs*24|1|0.26|ENSG00000133424|chr22:33337780-33337781|-/G|frameshift_variant;nc|ENSG00000133424|O95461-2|LARGE1	42.47446043378293	0.25855550551448697	3				NaN	NaN	0	NaN	6000	4426	10426
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10436	31.481	NaN	3598.5	30	0	992.09	0.146			+	16116	HDQDTLRRLKR	11	33	719.4038136820915	1436.7930744309829	2	719.4047241210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HDQDTLRRLKR_	REV__ENST00000262094.9_1_18:52495892-52544833:+|nuORF	11.635926663890343	0.8160050785733157	3				NaN	NaN	0	NaN	6005	4429	10435
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10446	31.505	NaN	3590.2	30	0	524.88	0.139				-1	 	0	54	350.20698623291264	698.3994195326253	2	350.2068176269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	6012	4432	10445
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10455	31.528	NaN	4786.3	30	0	802.18	0.145	+			48551	VTNWDDMEK	9	69	569.2479664141991	1136.4813798951982	2	569.2477416992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTNWDDMEK_	ACTB|p.I85T|1|0.1|ENSG00000075624|chr7:5529270-5529270|A/G|missense_variant;ENSG00000075624|ENST00000646664|ACTB;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENST00000436287.1_1_1:224052226-224052508:-|nuORF;ENST00000457622.1_1_6:46172676-46173294:+|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000502306.1_1_5:15450853-15451165:+|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF	88.1336951990783	0.07012705547711102	3				NaN	NaN	0	NaN	6018	4435	10454
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10468	31.557	NaN	2855.1	30	0	333.88	0.214	+			22181	KSSSLSAYGRT	11	70	578.8032895362823	1155.5920261393644	2	578.802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSSSLSAYGRT_	DMTN|p.P291S|1|0.49|ENSG00000158856|chr8:22080215-22080215|C/T|missense_variant	53.59686742100583	0.38061189074210516	3				NaN	NaN	0	NaN	6028	4438	10467
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10469	31.561	NaN	1603.2	30	0	123.58	0.106	+			24303	LFFFLTTPA	9	56	528.7901512377379	NaN	0	528.7900390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LFFFLTTPA_	ENSG00000165548|ENST00000298351|TMEM63C;TMEM63C|p.S689Pfs*10|1|0.46|ENSG00000165548|chr14:77251812-77251812|T/-|frameshift_variant	39.252832667884924	0.27938773122138094	3				NaN	NaN	0	NaN	6029	4438	10467
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10470	31.563	NaN	1374	30	0	256.62	0.035			+	26276	LSTPTDLRL	9	45	508.29240626387065	1014.5702595945413	2	508.794189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSTPTDLRL_	REV__ENST00000563005.5_1_16:55854223-55866983:-|nuORF;REV__nc|ENSG00000291109|Q9UKY3-2|CES1P1;REV__nc|ENSG00000291109|Q9UKY3|CES1P1	37.81151784470057	0.4459294069877048	3				NaN	NaN	0	NaN	6030	4438	10467
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10482	31.588	NaN	4916.1	30	0	819.33	0.214	+			35234	SALEHSIQY	9	58	524.2590649776618	1046.5035770221234	2	524.2591552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SALEHSIQY_	ENSG00000121691|ENST00000241052|CAT;ENST00000525707.1_1_11:34482779-34490041:+|nuORF	64.20726635412375	0.17854274437659667	3				NaN	NaN	0	NaN	6039	4441	10481
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10483	31.592	NaN	1612.9	30	0	174.14	0.106	+			193	AALDWVTKK	9	50	516.2974960256793	1030.5804391181584	2	516.2970581054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AALDWVTKK_	ENSG00000227057|ENST00000374617|WDR46;ENST00000488944.5_1_6:33255341-33255794:-|nuORF	45.97224482568171	0.3502073465782774	3				NaN	NaN	0	NaN	6040	4441	10481
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10484	31.594	NaN	1059.4	30	0	144.1	0.038			+	43765	TLGRVLLSGLQ	11	40	386.23845084124474	NaN	0	386.23773193359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TLGRVLLSGLQ_	REV__ENSG00000112584|ENST00000476287|FAM120B;REV__nc|ENSG00000112584|Q96EK7-3|FAM120B	21.780426970141523	0.456735970842152	3				NaN	NaN	0	NaN	6041	4441	10481
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10498	31.633	NaN	3103.2	30	0	313.27	0.214	+			50596	YDKNKTSM	8	61	493.7346647192623	985.4547765053246	2	493.7337646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YDKNKTSM_	tr|U7SU86|U7SU86_FUSNUPseudouridinesynthaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01340PE=3SV=1	71.37791200682192	0.3954169775488141	3				NaN	NaN	0	NaN	6049	4447	10497
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10499	31.637	NaN	3085.7	30	0	754.8	0.036	+			11105	FFIYQDTY	8	59	548.7514474545516	1095.488341975903	2	548.7510375976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FFIYQDTY_	tr|U7T4W6|U7T4W6_FUSNUDUF3798domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00220PE=4SV=1	84.9155231211612	0.2928622555056503	3				NaN	NaN	0	NaN	6050	4447	10497
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10511	31.662	NaN	2101.5	30	0	296.86	0.145				-1	KIDIIRMQL	9	42	573.3376827500279	1144.6608125668556	2	573.3372802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_KIDIIRM(Oxidation (M))QL_	ENSG00000123143|ENST00000242783|PKN1;ENST00000585839.5_1_19:14544333-14578454:+|nuORF;nc|ENSG00000123143|Q16512-2|PKN1;nc|ENSG00000123143|Q16512-3|PKN1;PKN1|p.P676Rfs*39|1|0.31|ENSG00000123143|chr19:14469390-14469391|-/G|frameshift_variant	45.97224482568171	0.3502073465782774	3				NaN	NaN	0	NaN	6059	4450	10510
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10522	31.689	NaN	790.08	30	0	96.863	0.142	+			6510	AYAPPPHVI	9	40	482.7651528443825	NaN	0	482.7646789550781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AYAPPPHVI_	ENSG00000128335|ENST00000358502|APOL2	60.403631409065575	0.14759742458823122	3				NaN	NaN	0	NaN	6067	4453	10521
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10532	31.713	NaN	1137.8	30	0	137.98	0.143	+			26608	LTYLVVSRG	9	46	336.53423121568574	NaN	0	336.53424072265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LTYLVVSRG_	ENST00000606723.2_1_6:25998815-25999043:+|nuORF	16.473147378115264	0.38122769658151995	3				NaN	NaN	0	NaN	6074	4456	10531
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10541	31.736	NaN	2940.7	30	0	565.22	0.214				-1	TDMELLVCTF	10	61	594.2701662070515	1186.5257794809029	2	594.2704467773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_TDM(Oxidation (M))ELLVCTF_	ENSG00000091592|ENST00000572272|NLRP1;ENST00000571307.1_1_17:5433304-5487319:-|nuORF;nc|ENSG00000091592|Q9C000-2|NLRP1;nc|ENSG00000091592|Q9C000-3|NLRP1;nc|ENSG00000091592|Q9C000-4|NLRP1;nc|ENSG00000091592|Q9C000-5|NLRP1	39.252832667884924	0.5560298534376815	3				NaN	NaN	0	NaN	6080	4459	10540
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10542	31.74	NaN	2323.8	30	0	355.9	0.106	+			6611	AYQKQPTIFQ	10	50	612.3248149747529	1222.6350770163058	2	612.3257446289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AYQKQPTIFQ_	ENSG00000142534|ENST00000270625|RPS11;ENST00000599167.5_1_19:49999677-50000690:+|nuORF;ENST00000600027.5_1_19:49999677-50000944:+|nuORF	59.93077597824379	0.36646980200755325	3				NaN	NaN	0	NaN	6081	4459	10540
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10543	31.742	NaN	1218.5	30	0	156.48	0.034	+			30775	QDSLAGLVL	9	40	458.2609623546156	NaN	0	458.2611999511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QDSLAGLVL_	ENSG00000185634|ENST00000332408|SHC4	26.69291269510374	0.34280015626154364	3				NaN	NaN	0	NaN	6082	4459	10540
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10554	31.767	NaN	3941.3	30	0	756.8	0.214	+			5438	ATYQTTLLH	9	64	524.2772200232747	1046.5398871133493	2	524.2772827148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATYQTTLLH_	ENSG00000003147|ENST00000402384|ICA1;ENST00000562640.1_1_16:22010196-22010523:+|nuORF;ICA1|p.E307Lfs*26|1|0.05|ENSG00000003147|chr7:8141801-8141802|-/TTTTTCAA|frameshift_variant;nc|ENSG00000003147|Q05084-2|ICA1;nc|ENSG00000003147|Q05084-3|ICA1	49.44154591367651	0.3095138337212152	3				NaN	NaN	0	NaN	6090	4462	10553
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10555	31.77	NaN	4576.6	30	0	451.55	0.04			+	6985	CQCGPFCPRTT	11	57	692.2840577827801	1382.5535626323601	2	692.7869873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	3 Carbamidomethyl (C)	_C(Carbamidomethyl (C))QC(Carbamidomethyl (C))GPFC(Carbamidomethyl (C))PRTT_	REV__ENSG00000182704|ENST00000333090|TSKU	43.650786325866115	0.5079891456189096	3				NaN	NaN	0	NaN	6091	4462	10553
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10567	31.795	NaN	3112.8	30	0	1364.4	0.144			+	49441	VVVKIKFDT	9	50	350.2182667675866	1047.6329709029599	3	350.2181396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVVKIKFDT_	REV__ENST00000478946.1_1_2:74071889-74072120:+|nuORF	21.9598887501803	0.5980208138527809	3				NaN	NaN	0	NaN	6100	4465	10566
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10584	31.842	NaN	1883.8	30	0	256.67	0.143	+			15684	GVMTVLIKR	9	52	508.81790519548014	1015.6212574577603	2	508.8175964355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVMTVLIKR_	ENSG00000109971|ENST00000534624|HSPA8;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;HSPA8|p.K569Dfs*6|1|0.3|ENSG00000109971|chr11:123058302-123058303|TC/-|frameshift_variant;nc|ENSG00000109971|P11142-2|HSPA8	62.107414245175825	0.1960472003779324	3				NaN	NaN	0	NaN	6111	4471	10583
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10602	31.887	NaN	1077.1	30	0	288.53	0.214				-1	 	0	36	494.2606567903219	493.2533803237219	1	494.2606201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	6123	4477	10601
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10603	31.891	NaN	2352.1	30	0	275.64	0.038			+	24790	LIHKFFFPF	9	46	598.3395206644124	NaN	0	598.3391723632812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LIHKFFFPF_	REV__AQR|p.K1234Sfs*17|1|0.35|ENSG00000021776|chr15:34870819-34870819|T/-|frameshift_variant;REV__AQR|p.K759Rfs*19|1|0.27|ENSG00000021776|chr15:34897678-34897678|T/-|frameshift_variant;REV__ENSG00000021776|ENST00000156471|AQR	35.61828744233558	0.29773779453147337	3				NaN	NaN	0	NaN	6124	4477	10601
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10614	31.914	NaN	2585.4	30	0	345.38	0.143	+			8085	DVTQENILL	9	54	522.782027094838	1043.5495012564759	2	522.7817993164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DVTQENILL_	ENSG00000109738|ENST00000264428|GLRB;nc|ENSG00000109738|P48167-2|GLRB	39.252832667884924	0.4290233611298554	3				NaN	NaN	0	NaN	6132	4480	10613
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10624	31.938	NaN	2283.8	30	0	284.51	0.214	+			45623	TYQEVAQKF	9	65	557.2828471568683	1112.5511413805366	2	557.2819213867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TYQEVAQKF_	ENSG00000093072|ENST00000399837|ADA2;nc|ENSG00000093072|Q9NZK5-2|ADA2	114.85826248499774	0.024312442104607014	3				NaN	NaN	0	NaN	6139	4483	10623
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10625	31.941	NaN	2364.8	30	0	325.19	0.106	+			14065	GSISDKFFQK	10	56	578.8036501987503	1155.5927474643006	2	578.8025512695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSISDKFFQK_	ENSG00000089472|ENST00000343002|HEPH;HEPH|p.R1086Qfs*4|1|0.29|ENSG00000089472|chrX:66266444-66266445|-/C|frameshift_variant;nc|ENSG00000089472|Q9BQS7-2|HEPH;nc|ENSG00000089472|Q9BQS7-3|HEPH;nc|ENSG00000089472|Q9BQS7-4|HEPH	56.43379154798735	0.3982744522255666	3				NaN	NaN	0	NaN	6140	4483	10623
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10626	31.943	NaN	1802.7	30	0	248.61	0.037			+	-1	LAGFPCKKIC	10	40	568.8014903700447	NaN	0	568.8008422851562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LAGFPCKKIC(Carbamidomethyl (C))_	REV__ABCE1|p.L313Wfs*10|1|0.22|ENSG00000164163|chr4:145119941-145119941|T/-|frameshift_variant;REV__ENSG00000164163|ENST00000296577|ABCE1	27.882242232435846	0.4086243523356342	3				NaN	NaN	0	NaN	6141	4483	10623
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10635	31.963	NaN	3277.7	30	0	371.62	0.214	+			13138	GGMSIFLKK	9	65	490.7838219613251	979.5530909894502	2	490.78338623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GGMSIFLKK_	ENST00000264995.7_1_3:131220431-131221595:-|nuORF	74.25504064058377	0.12238981753128622	3				NaN	NaN	0	NaN	6147	4486	10634
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10636	31.967	NaN	3503.2	30	0	453.31	0.034	+			14094	GSLGFTVTK	9	55	455.2557178997199	908.4968828662398	2	455.25506591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSLGFTVTK_	ENSG00000163629|ENST00000411767|PTPN13;nc|ENSG00000163629|Q12923-2|PTPN13;nc|ENSG00000163629|Q12923-3|PTPN13;nc|ENSG00000163629|Q12923-4|PTPN13;PTPN13|p.T2330Qfs*13|1|0.12|ENSG00000163629|chr4:86807799-86807799|A/-|frameshift_variant	78.26377905018397	0.10505600812668463	3				NaN	NaN	0	NaN	6148	4486	10634
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10647	31.992	NaN	3000.9	30	0	459.31	0.212	+			38231	SQLEQENNLLK	11	60	658.3455923903798	1314.6766318475595	2	658.345947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SQLEQENNLLK_	ENSG00000102804|ENST00000458659|TSC22D1;ENST00000496314.1_1_13:45008764-45009186:-|nuORF;nc|ENSG00000102804|Q15714-2|TSC22D1;nc|ENSG00000102804|Q15714-3|TSC22D1;nc|ENSG00000102804|Q15714-5|TSC22D1	63.69406221917213	0.2904805327065929	3				NaN	NaN	0	NaN	6156	4489	10646
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10648	31.995	NaN	1293.9	30	0	293.09	0.036				-1	RCQPGFHSL	9	46	551.2653198242188	NaN	0	551.2653198242188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_RC(Carbamidomethyl (C))QPGFHSL_	ENSG00000135862|ENST00000258341|LAMC1;ENST00000479499.1_1_1:183079785-183086097:+|nuORF;LAMC1|p.T1225Kfs*5|1|0.07|ENSG00000135862|chr1:183132506-183132507|-/AAAT|frameshift_variant	42.396135135203025	0.2590952873412954	3				NaN	NaN	0	NaN	6157	4489	10646
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10659	32.021	NaN	9435.7	30	0	6216.4	0.214	+			24555	LGLVGLGGAKY	11	55	349.87829598073046	1046.6130585423914	3	349.8780517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LGLVGLGGAKY_	ENST00000476612.1_1_1:154523812-154524267:-|nuORF	23.04248740728303	0.7480942964079428	3				NaN	NaN	0	NaN	6165	4492	10658
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10660	32.024	NaN	3760.7	30	0	481.47	0.106	+			5904	AVLDFVKQK	9	67	524.3135848184951	1046.61261670379	2	524.3134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVLDFVKQK_	ENSG00000186001|ENST00000425562|LRCH3;nc|ENSG00000186001|Q96II8-2|LRCH3;nc|ENSG00000186001|Q96II8-3|LRCH3;nc|ENSG00000186001|Q96II8-4|LRCH3	107.00750918261382	0.032051501805654005	3				NaN	NaN	0	NaN	6166	4492	10658
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10661	32.026	NaN	1182.3	30	0	128.56	0.033			+	26270	LSTHPILP	8	41	439.26130181347264	876.5080506937453	2	439.2601623535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSTHPILP_	REV__ENST00000480213.1_1_1:153634874-153635650:-|nuORF	28.2542754592877	0.7411748056684583	3				NaN	NaN	0	NaN	6167	4492	10658
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10672	32.051	NaN	1080.4	30	0	170.6	0.143			+	32664	RAARGKLAR	9	40	499.8207702636719	NaN	0	499.8207702636719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RAARGKLAR_	REV__ENSG00000100241|ENST00000380817|SBF1;REV__nc|ENSG00000100241|O95248-4|SBF1;REV__nc|ENSG00000100241|O95248|SBF1;REV__SBF1|p.L946Wfs*16|1|0.26|ENSG00000100241|chr22:50461526-50461526|G/-|frameshift_variant;REV__SBF1|p.R599C|1|0.47|ENSG00000100241|chr22:50463387-50463387|G/A|missense_variant;REV__SBF1|p.S1077Afs*28|3|0.34|ENSG00000100241|chr22:50460327-50460327|G/-|frameshift_variant;REV__SBF1|p.S1077Qfs*11|2|0.34|ENSG00000100241|chr22:50460326-50460327|-/G|frameshift_variant	29.14955571784316	0.3303970763161698	3				NaN	NaN	0	NaN	6175	4495	10671
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10682	32.076	NaN	1832.8	30	0	278.05	0.145	+			30454	PYVTFPRQCPP	11	40	652.828125	NaN	0	652.828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PYVTFPRQCPP_	OTUD7B|p.A728V|1|0.38|ENSG00000264522|chr1:149944206-149944206|G/A|missense_variant	33.921630207806714	0.41424167740351664	3				NaN	NaN	0	NaN	6182	4498	10681
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10690	32.096	NaN	3242.2	30	0	477.36	0.214	+			14955	GTMNLGGSLTR	11	50	553.7849055362707	1105.5552581393413	2	553.784912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTMNLGGSLTR_	ENSG00000077549|ENST00000264202|CAPZB;nc|ENSG00000077549|P47756-1|CAPZB	70.41160668669231	0.23230827815249774	3				NaN	NaN	0	NaN	6187	4501	10689
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10691	32.1	NaN	1014.7	30	0	201.28	0.034	+			21545	KNTHSLFV	8	38	473.25904504170376	NaN	0	473.2589416503906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KNTHSLFV_	ENSG00000120669|ENST00000379881|SOHLH2;nc|ENSG00000120669|Q9NX45-2|SOHLH2;nc|ENSG00000120669|Q9NX45-3|SOHLH2;SOHLH2|p.K134Nfs*48|1|0.07|ENSG00000120669|chr13:36193649-36193649|T/-|frameshift_variant	24.20275056022122	1.7418937515398478	3				NaN	NaN	0	NaN	6188	4501	10689
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10700	32.12	NaN	2016.3	30	0	318.24	0.143	+			48161	VSYTRSVTL	9	46	513.2847053833342	1024.5548578334683	2	513.78564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSYTRSVTL_	ENSG00000275395|ENST00000616721|FCGBP;ENSG00000275395|ENST00000616721|FCGBP;FCGBP-ACSS2|1|fusion;FCGBP-ACSS2|1|fusion;nc|ENSG00000275395|Q9Y6R7|FCGBP;nc|ENSG00000275395|Q9Y6R7|FCGBP;nc|ENSG00000275395|Q9Y6R7|FCGBP	43.650786325866115	0.37743712540499297	3				NaN	NaN	0	NaN	6194	4504	10699
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10710	32.144	NaN	978.14	30	0	119.2	0.142	+			48948	VVESKNVAL	9	41	479.78187905536373	NaN	0	479.7817077636719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVESKNVAL_	ENSG00000106853|ENST00000407693|PTGR1;nc|ENSG00000106853|Q14914-2|PTGR1	56.72105179125745	0.16330365735109603	3				NaN	NaN	0	NaN	6201	4507	10709
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10729	32.19	NaN	2062.7	30	0	455.66	0.139				-1	 	0	35	377.74603534948324	753.4775177657665	2	377.7457275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	6214	4513	10728
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10753	32.257	NaN	1934.1	30	0	188.86	0.214	+			44771	TTPQISPSTL	10	58	522.782027094838	1043.5495012564759	2	522.7820434570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTPQISPSTL_	ENSG00000094631|ENST00000334136|HDAC6;nc|ENSG00000094631|Q9UBN7-2|HDAC6	52.936696900407355	0.4300801048568001	3				NaN	NaN	0	NaN	6229	4522	10752
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10754	32.26	NaN	1011.3	30	0	103.97	0.035	+			35706	SDLHPIKVV	9	51	336.5341491699219	NaN	0	336.5341491699219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SDLHPIKVV_	ENSG00000181222|ENST00000674977|POLR2A;nc|ENSG00000181222|P24928|POLR2A	19.359975847455235	0.3714571876404798	3				NaN	NaN	0	NaN	6230	4522	10752
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10770	32.303	NaN	1270.6	30	0	174.22	0.144	+			5288	ATVIFVASQK	10	43	532.3112822710452	NaN	0	532.3116455078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATVIFVASQK_	ENSG00000143493|ENST00000366994|INTS7;INTS7|p.F796Sfs*34|1|0.34|ENSG00000143493|chr1:211946635-211946635|A/-|frameshift_variant;nc|ENSG00000143493|Q9NVH2-2|INTS7;nc|ENSG00000143493|Q9NVH2-3|INTS7;nc|ENSG00000143493|Q9NVH2-4|INTS7	68.84614121027924	0.16203925040239886	3				NaN	NaN	0	NaN	6240	4528	10769
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10778	32.323	NaN	1649.6	30	0	268.11	0.142	+			2560	AQATISFPK	9	53	481.76916341289024	961.5237738925805	2	482.2700500488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AQATISFPK_	CDC6|p.P86Lfs*17|1|0.14|ENSG00000094804|chr17:40291132-40291132|C/-|frameshift_variant;ENSG00000094804|ENST00000209728|CDC6	52.936696900407355	0.27249468807391813	3				NaN	NaN	0	NaN	6245	4531	10777
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10796	32.37	NaN	2629.5	30	0	506.03	0.214	+			51343	YSRSLLRV	8	50	331.8664033063681	992.5773805193044	3	331.8663024902344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YSRSLLRV_	ENSG00000165632|ENST00000344293|TAF3;TAF3|p.S4T|1|0.05|ENSG00000165632|chr10:7818720-7818720|G/C|missense_variant	31.529811441608018	0.715883593221515	3				NaN	NaN	0	NaN	6257	4537	10795
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10797	32.373	NaN	1788.1	30	0	206.86	0.035			+	8821	EELKEQAAL	9	51	515.774606328335	1029.53465972347	2	515.7749633789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EELKEQAAL_	REV__ENSG00000155749|ENST00000392257|FLACC1;REV__nc|ENSG00000155749|Q96Q35|FLACC1	62.107414245175825	0.1960472003779324	3				NaN	NaN	0	NaN	6258	4537	10795
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10814	32.416	NaN	1526	30	0	547.06	0.142	+			37758	SLVKPNQK	8	38	457.27682104028673	912.5390891473735	2	457.27667236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLVKPNQK_	LTR33_dup6907|chr13:43062072-43062490:-|1.5020271884645031|0.1937030753486897|2.95|477.0|25|2|anti-sense	24.20275056022122	0.7724576178584145	3				NaN	NaN	0	NaN	6269	4543	10813
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10825	32.443	NaN	2794.4	30	0	484.62	0.214	+			34858	RYSSMAASF	9	47	510.2343804516363	1018.4542079700726	2	510.2344055175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RYSSMAASF_	ENSG00000162366|ENST00000294338|PDZK1IP1	49.536043120802724	0.308405419312776	3				NaN	NaN	0	NaN	6277	4546	10824
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10826	32.446	NaN	2000	30	0	376.29	0.106	+			14704	GTIGLTIAK	9	42	437.2740440651797	872.5335351971594	2	437.2738342285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTIGLTIAK_	ENSG00000112992|ENST00000344920|NNT	90.60085204095205	0.06317133949006545	3				NaN	NaN	0	NaN	6278	4546	10824
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10827	32.448	NaN	1005.8	30	0	117.74	0.034			+	24585	LGPLPGGNTL	10	35	469.7690966805893	937.5236404279786	2	469.76898193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LGPLPGGNTL_	REV__ENSG00000145214|ENST00000273814|DGKQ	36.446750945000026	0.5818864909973037	3				NaN	NaN	0	NaN	6279	4546	10824
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10845	32.495	NaN	1633.5	30	0	329.73	0.142			+	25349	LPEHVSQL	8	45	461.7539166647005	921.493280396201	2	461.7529602050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LPEHVSQL_	REV__ENSG00000113273|ENST00000264914|ARSB;REV__nc|ENSG00000113273|P15848-2|ARSB	49.44154591367651	0.597725784090933	3				NaN	NaN	0	NaN	6291	4552	10844
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10869	32.552	NaN	1109.3	30	0	283.23	0.214	+			19186	IYTNLNQKI	9	32	553.8138323778169	NaN	0	553.8134155273438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IYTNLNQKI_	ENSG00000144036|ENST00000272427|EXOC6B;nc|ENSG00000144036|Q9Y2D4-2|EXOC6B	19.996771675451527	0.3693019437812985	3				NaN	NaN	0	NaN	6309	4558	10868
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10870	32.556	NaN	1130.8	30	0	214.49	0.106	+			20664	KGKYGVNIG	9	34	468.26962244406684	934.5246919549337	2	468.2691650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KGKYGVNIG_	tr|U7SUI2|U7SUI2_FUSNUUPF0597proteinHMPREF1766_01169OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01169PE=3SV=1	23.04248740728303	0.5879033540491928	3				NaN	NaN	0	NaN	6310	4558	10868
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10871	32.557	NaN	1146.5	30	0	190.42	0.036	+			13682	GPFSYPGVFP	10	35	534.2626471401443	1066.5107413470885	2	534.262939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GPFSYPGVFP_	ENST00000495535.1_1_7:150066106-150067109:+|nuORF	31.954861631926434	0.6188749698950511	3				NaN	NaN	0	NaN	6311	4558	10868
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10910	32.661	NaN	804.13	30	0	101.51	0.142			+	7880	DRLVVPEL	8	29	470.7757099067308	NaN	0	470.776611328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DRLVVPEL_	REV__ENSG00000249115|ENST00000203166|HAUS5;REV__ENST00000585968.5_1_19:36103696-36110661:+|nuORF;REV__nc|ENSG00000249115|O94927-2|HAUS5	16.473147378115264	1.7418937515398478	3				NaN	NaN	0	NaN	6335	4573	10909
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10921	32.688	NaN	2249.5	30	0	485.38	0.214			+	-1	LHDVTKEVM	9	33	544.2752635531197	1086.5359741730392	2	544.2750854492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LHDVTKEVM(Oxidation (M))_	REV__ENSG00000189129|ENST00000372263|PLAC9	32.81241826257853	0.4965981579233955	3				NaN	NaN	0	NaN	6343	4576	10920
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10922	32.692	NaN	1654	30	0	328.03	0.038			+	-1	QTPVKIKDMN	10	44	595.3171997070312	NaN	0	595.3171997070312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_QTPVKIKDM(Oxidation (M))N_	REV__ENSG00000163686|ENST00000478253|ABHD6	20.030474535948922	0.4201028297492154	3				NaN	NaN	0	NaN	6344	4576	10920
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10933	32.715	NaN	1504.6	30	0	105.24	0.144	+			8398	EANQHELLY	9	49	558.7705427988478	1115.5265326644956	2	558.769775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EANQHELLY_	ENSG00000153029|ENST00000367580|MR1;ENST00000367578.1_1_1:181003164-181019478:+|nuORF;ENST00000438435.6_1_1:181006220-181024398:+|nuORF;MR1|p.P230Qfs*5|1|0.22|ENSG00000153029|chr1:181052314-181052314|C/-|frameshift_variant;nc|ENSG00000153029|Q95460-2|MR1;nc|ENSG00000153029|Q95460-3|MR1;nc|ENSG00000153029|Q95460-4|MR1;nc|ENSG00000153029|Q95460-5|MR1	62.107414245175825	0.1960472003779324	3				NaN	NaN	0	NaN	6352	4579	10932
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10944	32.742	NaN	3237.7	30	0	650.68	0.214	+			1315	AETELINRV	9	53	522.7880318911957	NaN	0	522.788330078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AETELINRV_	ENSG00000134215|ENST00000370056|VAV3;ENST00000343258.8_1_1:108115955-108328118:-|nuORF;ENST00000525460.5_1_1:108115955-108220600:-|nuORF;nc|ENSG00000134215|Q9UKW4-2|VAV3;nc|ENSG00000134215|Q9UKW4-3|VAV3;nc|ENSG00000134215|Q9UKW4-4|VAV3	77.31757898189308	0.08057531075035683	3				NaN	NaN	0	NaN	6360	4582	10943
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10945	32.746	NaN	1067.7	30	0	300.9	0.106				-1	RVMMVAKK	8	29	497.7798242414912	993.5450955497824	2	497.778564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Oxidation (M)	_RVM(Oxidation (M))M(Oxidation (M))VAKK_	ENSG00000167004|ENST00000300289|PDIA3;ENST00000434494.5_1_15:44038867-44063413:+|nuORF;ENST00000471856.1_1_1:146649692-146651075:+|nuORF	18.324413293986947	0.7971860551947066	3				NaN	NaN	0	NaN	6361	4582	10943
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10946	32.748	NaN	1430.4	30	0	216.1	0.036			+	23958	LDSQASDEIS	10	48	532.7410843499134	NaN	0	532.7413940429688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LDSQASDEIS_	REV__ENSG00000163565|ENST00000295809|IFI16;REV__ENST00000493884.5_1_1:158984458-159022017:+|nuORF;REV__nc|ENSG00000163565|Q16666-2|IFI16;REV__nc|ENSG00000163565|Q16666-3|IFI16;REV__nc|ENSG00000163565|Q16666-6|IFI16;REV__nc|ENSG00000163565|Q16666-8|IFI16	49.536043120802724	0.30853568297719935	3				NaN	NaN	0	NaN	6362	4582	10943
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10982	32.83	NaN	1314	30	0	172.28	0.143	+			44418	TSLQHGFLV	9	36	501.27495806271975	1000.5353631922395	2	501.2738037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSLQHGFLV_	ENSG00000130589|ENST00000467148|HELZ2;HELZ2|p.G2213Vfs*22|1|0.14|ENSG00000130589|chr20:63561876-63561876|C/-|frameshift_variant;HELZ2|p.R2206Vfs*29|2|0.28|ENSG00000130589|chr20:63561898-63561898|G/-|frameshift_variant;nc|ENSG00000130589|Q9BYK8-2|HELZ2;nc|ENSG00000130589|Q9BYK8|HELZ2	35.61828744233558	0.47037581924408073	3				NaN	NaN	0	NaN	6389	4591	10981
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	10993	32.856	NaN	1958.8	30	0	706.53	0.145			+	-1	STIGLLRWM	9	43	364.8662584902878	1091.5769460710635	3	364.8659973144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_STIGLLRWM(Oxidation (M))_	REV__KLKB1|p.V593L|1|0.18|ENSG00000164344|chr4:186258072-186258072|G/T|missense_variant	25.57405402267927	0.5642445186134241	3				NaN	NaN	0	NaN	6397	4594	10992
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11015	32.909	NaN	3721.4	30	0	568.47	0.214	+			41367	SVMELARLK	9	67	523.8047771715777	1045.5950014099553	2	523.8053588867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVMELARLK_	ENSG00000115649|ENST00000360507|CNPPD1	120.30596017624542	0.02101454110788768	3				NaN	NaN	0	NaN	6413	4600	11014
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11016	32.913	NaN	1640.4	30	0	172.28	0.106	+			14676	GTIFGIYRK	9	42	527.8059293886428	1053.5973058440854	2	527.8056030273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTIFGIYRK_	ENSG00000165140|ENST00000375326|FBP1;FBP1|p.G294Efs*11|1|0.11|ENSG00000165140|chr9:94603517-94603517|C/-|frameshift_variant	53.351449002276354	0.2690372970092375	3				NaN	NaN	0	NaN	6414	4600	11014
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11017	32.915	NaN	1317.1	30	0	257.43	0.035			+	33294	RGPGRANPVA	10	36	332.18873493095924	993.5443753930778	3	332.1883544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RGPGRANPVA_	REV__FBXO41|p.G368V|1|0.51|ENSG00000163013|chr2:73266485-73266485|C/A|missense_variant	21.68575002086885	0.7027366847906487	3				NaN	NaN	0	NaN	6415	4600	11014
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11028	32.94	NaN	1946	30	0	516.34	0.214			+	-1	ECMSVRGLD	9	26	513.2225877755775	1024.430622617955	2	513.2230834960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ECM(Oxidation (M))SVRGLD_	REV__ENST00000406875.7_1_7:139252771-139252849:-|nuORF	12.811709888998246	0.6112419832031292	3				NaN	NaN	0	NaN	6423	4603	11027
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11029	32.944	NaN	1322.1	30	0	186.34	0.035	+			47337	VPDPLRLTP	9	46	336.5342386362043	NaN	0	336.53350830078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VPDPLRLTP_	ENST00000438934.5_2_22:18958062-18975611:+|nuORF;ENST00000440005.6_2_22:18958062-18978324:+|nuORF	25.450171626174864	0.34907449758287085	3				NaN	NaN	0	NaN	6424	4603	11027
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11036	32.962	NaN	1236.3	30	0	373.83	0.144				-1	LLRCCPLW	8	26	530.775146484375	NaN	0	530.775146484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_LLRC(Carbamidomethyl (C))CPLW_	ENSG00000130589|ENST00000467148|HELZ2;nc|ENSG00000130589|Q9BYK8-2|HELZ2;nc|ENSG00000130589|Q9BYK8|HELZ2	12.959181472943097	1.7418937515398478	3				NaN	NaN	0	NaN	6428	4606	11035
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11059	33.016	NaN	5186.2	30	0	759.91	0.214			+	51182	YPIEGTHII	9	58	521.782288891909	1041.550024850618	2	521.7822875976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YPIEGTHII_	REV__ENSG00000152926|ENST00000282869|ZNF117;REV__ZNF117|p.I326Ffs*28|1|0.45|ENSG00000152926|chr7:64978595-64978595|T/-|frameshift_variant	64.20726635412375	0.17854274437659667	3				NaN	NaN	0	NaN	6445	4612	11058
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11060	33.019	NaN	1608.4	30	0	217.57	0.036	+			26860	LVWTLSPLF	9	41	538.3109741210938	NaN	0	538.3109741210938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LVWTLSPLF_	ENST00000589882.1_1_6:41248622-41249060:-|nuORF;nc|ENSG00000124731|Q9NP99-3|TREM1	33.51558372728122	0.30835390848773375	3				NaN	NaN	0	NaN	6446	4612	11058
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11088	33.1	NaN	1535.5	30	0	236.56	0.145	+			34869	RYTIVQQQI	9	44	574.8256139803086	1147.6366750274171	2	574.8253173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RYTIVQQQI_	ENSG00000130640|ENST00000252936|TUBGCP2;nc|ENSG00000130640|Q9BSJ2-3|TUBGCP2;nc|ENSG00000130640|Q9BSJ2-4|TUBGCP2	47.95952297671804	0.32689736945648856	3				NaN	NaN	0	NaN	6462	4624	11087
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11106	33.148	NaN	4013	30	0	646.84	0.214	+			41574	SVQGAALVQIK	11	63	557.3355024732891	1112.6564520133782	2	557.3348999023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVQGAALVQIK_	chr16:1980544-1980641|439|11.94|0.64|4.22|-|ENST00000566005|NOXO1,NOXO1;chr16:1980728-1980939|449|16.41|0.86|4.26|-|ENST00000566005|NOXO1,NOXO1;ENSG00000196408|ENST00000356120|NOXO1;nc|ENSG00000196408|Q8NFA2-2|NOXO1;nc|ENSG00000196408|Q8NFA2-4|NOXO1;nc|ENSG00000196408|Q8NFA2|NOXO1	139.7601822506043	0.0005276873573507997	3				NaN	NaN	0	NaN	6474	4630	11105
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11107	33.152	NaN	1528.5	30	0	204.05	0.036	+			42138	SYNPITHQL	9	45	536.7752439442185	1071.5359349552368	2	536.7744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SYNPITHQL_	ENSG00000163913|ENST00000348417|IFT122;ENST00000506507.5_1_3:129168750-129233481:+|nuORF;nc|ENSG00000163913|Q9HBG6-11|IFT122;nc|ENSG00000163913|Q9HBG6-3|IFT122;nc|ENSG00000163913|Q9HBG6-5|IFT122;nc|ENSG00000163913|Q9HBG6-6|IFT122	41.42661286455405	0.403525789677298	3				NaN	NaN	0	NaN	6475	4630	11105
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11130	33.215	NaN	2650.5	30	0	286.79	0.145			+	44526	TSVKSYATREL	11	55	627.83764633493	1253.66073973666	2	627.837158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSVKSYATREL_	REV__KIF18A|p.R666Kfs*29|1|0.12|ENSG00000121621|chr11:28036616-28036617|-/T|frameshift_variant	31.634271133179894	0.6579734920221648	3				NaN	NaN	0	NaN	6489	4639	11129
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11139	33.237	NaN	1984.4	30	0	227.2	0.214	+			50471	YAFNFEMY	8	49	542.7243558304958	1083.4341587277916	2	542.723876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YAFNFEMY_	ENST00000337179.9_1_12:93795963-93796278:+|nuORF	33.51558372728122	0.7005509609380386	3				NaN	NaN	0	NaN	6495	4642	11138
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11140	33.24	NaN	1498.9	30	0	195.34	0.035	+			25140	LLSDKATSPL	10	48	522.8007561275881	1043.586959321976	2	523.3016357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LLSDKATSPL_	ENSG00000130529|ENST00000252826|TRPM4;ENST00000596338.5_1_19:49685858-49692185:+|nuORF;nc|ENSG00000130529|Q8TD43-2|TRPM4;nc|ENSG00000130529|Q8TD43-3|TRPM4;TRPM4|p.F902Sfs*22|1|0.3|ENSG00000130529|chr19:49200356-49200356|T/-|frameshift_variant;TRPM4|p.W1124Gfs*5|1|0.32|ENSG00000130529|chr19:49210750-49210751|GT/-|frameshift_variant	36.446750945000026	0.5818864909973037	3				NaN	NaN	0	NaN	6496	4642	11138
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11151	33.264	NaN	1806.9	30	0	204.17	0.214	+			594	ADLPTHSAAL	10	43	498.2623054812789	994.5100580293578	2	498.26177978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ADLPTHSAAL_	ENST00000464234.5_1_3:195474049-195480138:-|nuORF	35.61828744233558	0.588957954432594	3				NaN	NaN	0	NaN	6504	4645	11150
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11152	33.267	NaN	2383.6	30	0	506.06	0.106	+			15116	GTQSFVFQR	9	49	535.2750834697002	1068.5356140062004	2	535.2762451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTQSFVFQR_	ENSG00000147955|ENST00000277010|SIGMAR1;ENST00000378892.5_1_9:34637493-34637721:-|nuORF;ENST00000497006.1_1_9:34637208-34637655:-|nuORF;nc|ENSG00000147955|Q99720-3|SIGMAR1;nc|ENSG00000147955|Q99720-4|SIGMAR1	134.7655990226056	0.012935733000282069	3				NaN	NaN	0	NaN	6505	4645	11150
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11153	33.269	NaN	2177.2	30	0	314.62	0.106	+			4926	ATQMVRMILK	10	61	595.84083208949	1189.66711124578	2	595.841064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATQMVRMILK_	ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5	53.59686742100583	0.4240759338601513	3				NaN	NaN	0	NaN	6506	4645	11150
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11154	33.271	NaN	1475.9	30	0	318.3	0.036	+			31514	QLFSTPALAAV	11	32	559.314616073491	1116.614679213782	2	559.3150634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QLFSTPALAAV_	ENST00000425802.1_1_1:52499214-52509659:+|nuORF	25.57405402267927	0.7215402271931856	3				NaN	NaN	0	NaN	6507	4645	11150
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11163	33.293	NaN	2087.6	30	0	444.4	0.145	+			15309	GTVDVTPFIKK	11	56	602.8502969527626	1203.6860409723251	2	602.8507690429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTVDVTPFIKK_	ENSG00000198408|ENST00000361464|OGA;nc|ENSG00000198408|O60502-2|OGA;nc|ENSG00000198408|O60502-4|OGA	70.41160668669231	0.23230827815249774	3				NaN	NaN	0	NaN	6513	4648	11162
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11174	33.318	NaN	1236.4	30	0	315.24	0.143				-1	RIHATMRS	8	41	494.26036889014114	NaN	0	494.2603454589844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_RIHATM(Oxidation (M))RS_	ENST00000471461.5_1_7:72717735-72721871:-|nuORF;nc|ENSG00000130305|Q96P11-3|NSUN5	24.20275056022122	1.7418937515398478	3				NaN	NaN	0	NaN	6521	4651	11173
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11186	33.345	NaN	2314.4	30	0	313.85	0.214	+			5792	AVHDITVAY	9	55	494.75860241331833	NaN	0	494.75860595703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVHDITVAY_	ENSG00000172954|ENST00000379509|LCLAT1;nc|ENSG00000172954|Q6UWP7|LCLAT1	40.5726180659479	0.27166212580479165	3				NaN	NaN	0	NaN	6530	4654	11185
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11187	33.349	NaN	1253.7	30	0	186.09	0.106				-1	SVMSIKKKA	9	52	336.5342386362043	NaN	0	336.534423828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_SVM(Oxidation (M))SIKKKA_	ENSG00000079156|ENST00000190611|OSBPL6;nc|ENSG00000079156|Q9BZF3-2|OSBPL6;nc|ENSG00000079156|Q9BZF3-3|OSBPL6;nc|ENSG00000079156|Q9BZF3-4|OSBPL6;nc|ENSG00000079156|Q9BZF3-5|OSBPL6;nc|ENSG00000079156|Q9BZF3-6|OSBPL6;OSBPL6|p.F898Lfs*31|1|0.36|ENSG00000079156|chr2:178394428-178394428|T/-|frameshift_variant;OSBPL6|p.P358Lfs*23|1|0.08|ENSG00000079156|chr2:178349305-178349305|C/-|frameshift_variant;OSBPL6|p.Y622Qfs*94|1|0.12|ENSG00000079156|chr2:178383264-178383265|-/TCAAG|frameshift_variant	18.262085536374414	0.37517301184500873	3				NaN	NaN	0	NaN	6531	4654	11185
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11188	33.351	NaN	2877	30	0	332.5	0.041			+	-1	WILFKKSRSMT	11	56	706.8883666992188	NaN	0	706.8883666992188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_WILFKKSRSM(Oxidation (M))T_	REV__GDPD1|p.Q248K|1|0.18|ENSG00000153982|chr17:59270967-59270967|C/A|missense_variant	30.317721548370564	0.4303027717346894	3				NaN	NaN	0	NaN	6532	4654	11185
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11201	33.391	NaN	2791.8	30	0	216.37	0.143			+	1412	AEVVGDVSKL	10	56	508.7849722493371	1015.5553915654742	2	508.7851867675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEVVGDVSKL_	REV__tr|U7T242|U7T242_FUSNUMalonylCoA-acylcarrierproteintransacylaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00462PE=3SV=1	85.16082228582465	0.15877915086237185	3				NaN	NaN	0	NaN	6539	4660	11200
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11212	33.417	NaN	3110.1	30	0	538.7	0.143	+			15835	GWFPLHEA	8	42	478.7349924912525	955.455432049305	2	478.7344970703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GWFPLHEA_	ASB15|p.L148Ffs*2|1|0.36|ENSG00000146809|chr7:123617723-123617723|C/-|frameshift_variant;ASB15|p.N141Kfs*2|1|0.32|ENSG00000146809|chr7:123617702-123617703|-/A|frameshift_variant;ASB15|p.W524Lfs*15|1|0.12|ENSG00000146809|chr7:123630095-123630096|-/TGATAAAATTTAATTTAGTA|frameshift_variant;ENSG00000146809|ENST00000451215|ASB15	26.79610172149135	0.7524337208463756	3				NaN	NaN	0	NaN	6547	4663	11211
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11238	33.486	NaN	1190.3	30	0	149.89	0.214				-1	MLILLPVCQ	9	42	543.8045654296875	NaN	0	543.8045654296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_MLILLPVC(Carbamidomethyl (C))Q_	CYBB|p.R73Q|1|0.56|ENSG00000165168|chrX:37783566-37783566|G/A|missense_variant	19.359975847455235	0.3714571876404798	3				NaN	NaN	0	NaN	6564	4672	11237
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11239	33.489	NaN	1236.5	30	0	213.62	0.036	+			44998	TVEDVFLRK	9	42	553.8143310546875	NaN	0	553.8143310546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVEDVFLRK_	ENSG00000062582|ENST00000317534|MRPS24	44.377184641726394	0.24544280798894275	3				NaN	NaN	0	NaN	6565	4672	11237
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11250	33.514	NaN	8043.6	30	0	654.23	0.143				-1	 	0	72	493.32453784594975	984.6345227586995	2	493.32354736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	6573	4675	11249
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11273	33.569	NaN	34310	30	0	17429	0.145	+			6682	AYVHMVTHF	9	67	368.8483530780923	1103.523229834477	3	368.8480224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AYVHMVTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	60.29395666154354	0.21116425950210296	3				NaN	NaN	0	NaN	6590	4681	11272
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11285	33.597	NaN	7131.3	30	0	726.68	0.214	+			6684	AYVHMVTHF	9	70	552.7690360592599	1103.5235191853196	2	552.7686157226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AYVHMVTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	110.33723246496265	0.028653888678955353	3				NaN	NaN	0	NaN	6599	4684	11284
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11286	33.601	NaN	4650	30	0	3705.8	0.106				-1	GRCTAKMPGP	10	31	537.7620901163557	1073.5096272995113	2	537.7617797851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GRC(Carbamidomethyl (C))TAKMPGP_	ENST00000473601.1_1_7:64021627-64023374:-|nuORF	14.864876125193954	0.7409144161711139	3				NaN	NaN	0	NaN	6600	4684	11284
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11287	33.603	NaN	3495.8	30	0	566.34	0.106	+			13109	GGFRCLAF	8	55	435.7187606314234	869.4229683296468	2	435.7171936035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GGFRCLAF_	ENSG00000077942|ENST00000327858|FBLN1;ENST00000476366.1_1_22:45937122-45946826:+|nuORF;nc|ENSG00000077942|P23142-2|FBLN1;nc|ENSG00000077942|P23142-3|FBLN1;nc|ENSG00000077942|P23142-4|FBLN1	42.47446043378293	0.6409579893742323	3				NaN	NaN	0	NaN	6601	4684	11284
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11288	33.605	NaN	3303.2	30	0	363.68	0.106			+	19357	KALCALTNRQH	11	57	627.8380181812217	1253.6614834292434	2	628.340576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KALCALTNRQH_	REV__ENSG00000180113|ENST00000316081|TDRD6;REV__nc|ENSG00000180113|O60522-2|TDRD6;REV__TDRD6|p.L1636Qfs*6|1|0.06|ENSG00000180113|chr6:46693034-46693035|-/AAAG|frameshift_variant;REV__TDRD6|p.N917Ifs*2|1|0.35|ENSG00000180113|chr6:46690872-46690872|A/-|frameshift_variant	49.536043120802724	0.4274608637932522	3				NaN	NaN	0	NaN	6602	4684	11284
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11289	33.606	NaN	1372.3	30	0	168.02	0.035	+			33731	RPITDSPVL	9	37	499.28795222203667	NaN	0	499.287841796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RPITDSPVL_	ENSG00000038274|ENST00000321757|MAT2B;nc|ENSG00000038274|Q9NZL9-2|MAT2B	29.170058357718403	0.3302935627494407	3				NaN	NaN	0	NaN	6603	4684	11284
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11302	33.634	NaN	1447.1	30	0	158.52	0.214	+			38733	SSLLEKGLD	9	41	481.26363158013174	960.5127102270635	2	481.2638854980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSLLEKGLD_	DCD|p.G79Dfs*5|1|0.43|ENSG00000161634|chr12:54645226-54645226|C/-|frameshift_variant;ENSG00000161634|ENST00000293371|DCD;nc|ENSG00000161634|P81605-2|DCD	66.96192283764107	0.15557981141143568	3				NaN	NaN	0	NaN	6613	4687	11301
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11303	33.638	NaN	603.49	30	0	125.31	0.106	+			29170	NVIRDAVTY	9	36	525.7822756785725	NaN	0	525.7828369140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NVIRDAVTY_	ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2	31.529811441608018	0.3183796599642538	3				NaN	NaN	0	NaN	6614	4687	11301
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11304	33.64	NaN	1794.4	30	0	443.76	0.037	+			51559	YYEMCWYV	8	32	578.72509765625	NaN	0	578.72509765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YYEMCWYV_	ENSG00000089094|ENST00000377071|KDM2B;ENSG00000173120|ENST00000529006|KDM2A;ENST00000538503.5_1_12:121882954-121987523:-|nuORF;KDM2A|p.G855Efs*24|2|0.34|ENSG00000173120|chr11:67250589-67250589|G/-|frameshift_variant;KDM2A|p.R834Vfs*3|1|0.38|ENSG00000173120|chr11:67250525-67250525|C/-|frameshift_variant;KDM2B|p.R1006Gfs*37|1|0.31|ENSG00000089094|chr12:121442425-121442425|G/-|frameshift_variant;nc|ENSG00000089094|Q8NHM5-2|KDM2B;nc|ENSG00000089094|Q8NHM5-3|KDM2B;nc|ENSG00000089094|Q8NHM5-4|KDM2B;nc|ENSG00000089094|Q8NHM5-5|KDM2B;nc|ENSG00000173120|Q9Y2K7-2|KDM2A;nc|ENSG00000173120|Q9Y2K7-3|KDM2A	9.47055586587303	1.741893751539848	3				NaN	NaN	0	NaN	6615	4687	11301
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11309	33.654	NaN	3492	30	0	465.3	0.145	+			15540	GVDSSIFQNPK	11	61	596.3039125861973	1190.5932722391944	2	596.30517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVDSSIFQNPK_	ENSG00000138303|ENST00000672957|ASCC1;nc|ENSG00000138303|Q8N9N2|ASCC1	131.61620852596164	0.001174228902351169	3				NaN	NaN	0	NaN	6617	4690	11308
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11347	33.754	NaN	8419.2	30	0	1158.1	0.144	+			6582	AYLHTTTTF	9	72	527.7639330801973	1053.5133132271944	2	527.7642822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AYLHTTTTF_	ABCC3|p.L968Afs*31|1|0.33|ENSG00000108846|chr17:50675920-50675921|-/G|frameshift_variant;ENSG00000108846|ENST00000285238|ABCC3;ENST00000502426.5_1_17:48736553-48755440:+|nuORF;nc|ENSG00000108846|O15438-2|ABCC3;nc|ENSG00000108846|O15438-4|ABCC3;nc|ENSG00000108846|O15438-5|ABCC3	128.8611167810002	0.015835461597062447	3				NaN	NaN	0	NaN	6643	4702	11346
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11358	33.782	NaN	1499.4	30	0	232.26	0.214	+			27438	MLGSLLHW	8	36	478.7558901045268	NaN	0	478.75616455078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MLGSLLHW_	ENSG00000134817|ENST00000606794|APLNR	37.028477286268924	1.7418937515398478	3				NaN	NaN	0	NaN	6651	4705	11357
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11359	33.785	NaN	1630.4	30	0	385.14	0.106			+	45872	VANGFKVKHK	10	34	564.3367919921875	NaN	0	564.3367919921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VANGFKVKHK_	REV__ENSG00000187950|ENST00000537054|OVCH1;REV__nc|ENSG00000187950|Q7RTY7|OVCH1;REV__OVCH1|p.K1050Nfs*2|1|0.18|ENSG00000187950|chr12:29443368-29443368|T/-|frameshift_variant	16.006774744331256	0.4201028297492154	3				NaN	NaN	0	NaN	6652	4705	11357
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11360	33.787	NaN	2214.6	30	0	334.55	0.106				-1	FILWRMIC	8	46	569.7979138927789	NaN	0	569.7979736328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_FILWRMIC(Carbamidomethyl (C))_	ENST00000522987.1_1_8:80915285-80942392:-|nuORF	28.2542754592877	1.7418937515398478	3				NaN	NaN	0	NaN	6653	4705	11357
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11361	33.789	NaN	836.57	30	0	108.05	0.035			+	50605	YDQLRLTL	8	38	511.286865234375	NaN	0	511.286865234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YDQLRLTL_	REV__ENSG00000197121|ENST00000354764|PGAP1;REV__ENST00000470179.5_1_2:197712669-197791463:-|nuORF;REV__ENST00000482051.5_1_2:197742354-197755557:-|nuORF;REV__nc|ENSG00000197121|Q75T13-2|PGAP1;REV__nc|ENSG00000197121|Q75T13-3|PGAP1;REV__nc|ENSG00000197121|Q75T13-4|PGAP1;REV__PGAP1|p.K723Yfs*11|1|0.11|ENSG00000197121|chr2:196846002-196846003|-/CTATGTGTTTAAGGTAT|frameshift_variant	32.81241826257853	1.7418937515398478	3				NaN	NaN	0	NaN	6654	4705	11357
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11382	33.84	NaN	1845.3	30	0	335.84	0.214	+			45629	TYQQVQQTL	9	54	554.7859965775508	1107.5574402219015	2	554.7855224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TYQQVQQTL_	ENSG00000126254|ENST00000262633|RBM42;nc|ENSG00000126254|Q9BTD8-2|RBM42;nc|ENSG00000126254|Q9BTD8-3|RBM42;nc|ENSG00000126254|Q9BTD8-4|RBM42	76.16968421966216	0.11411088698345859	3				NaN	NaN	0	NaN	6669	4711	11381
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11383	33.843	NaN	1786	30	0	259.94	0.036	+			45496	TYDSVTDKF	9	50	538.2513320493626	1074.4881111655252	2	538.2515258789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TYDSVTDKF_	ENSG00000115464|ENST00000398571|USP34;ENST00000463046.5_1_2:61463458-61483580:-|nuORF;nc|ENSG00000115464|Q70CQ2-2|USP34;nc|ENSG00000115464|Q70CQ2-3|USP34;USP34|p.L2716Sfs*30|1|0.05|ENSG00000115464|chr2:61214596-61214597|-/AAGCTGA|frameshift_variant;USP34|p.L3228*|1|0.22|ENSG00000115464|chr2:61190564-61190564|A/-|frameshift_variant	70.8162118820467	0.13725933411854815	3				NaN	NaN	0	NaN	6670	4711	11381
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11400	33.886	NaN	1477.2	30	0	254.84	0.214	+			36044	SEISNIARV	9	56	494.7742180184985	NaN	0	494.77447509765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEISNIARV_	ENSG00000016490|ENST00000394711|CLCA1	70.8162118820467	0.10318768208603292	3				NaN	NaN	0	NaN	6681	4717	11399
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11401	33.89	NaN	1789.7	30	0	229.91	0.106	+			35822	SECYVVVTI	9	34	338.1716009767314	1011.4929735303942	3	338.5058288574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SECYVVVTI_	ENSG00000165181|ENST00000682961|SHOC1;nc|ENSG00000165181|Q5VXU9-3|SHOC1;nc|ENSG00000165181|Q5VXU9|SHOC1	32.81241826257853	0.4965981579233955	3				NaN	NaN	0	NaN	6682	4717	11399
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11402	33.892	NaN	1449.4	30	0	286.79	0.034	+			43561	THTVVKLK	8	33	463.29477359489135	NaN	0	463.294677734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_THTVVKLK_	ENSG00000163867|ENST00000357182|ZMYM6;ENST00000472971.1_1_1:35476328-35477547:-|nuORF;ENST00000493328.5_1_1:35455862-35480681:-|nuORF;nc|ENSG00000163867|O95789-1|ZMYM6;ZMYM6|p.F804Lfs*6|1|0.38|ENSG00000163867|chr1:34988670-34988670|A/-|frameshift_variant;ZMYM6|p.I637Yfs*14|1|0.36|ENSG00000163867|chr1:35005177-35005177|T/-|frameshift_variant;ZMYM6|p.L686Ifs*41|1|0.03|ENSG00000163867|chr1:34992324-34992325|-/GAAAGGAAAAGAAAAT|frameshift_variant;ZMYM6|p.N1298Ifs*9|1|0.15|ENSG00000163867|chr1:34987189-34987189|T/-|frameshift_variant;ZMYM6|p.N724Mfs*15|1|0.42|ENSG00000163867|chr1:34988911-34988911|T/-|frameshift_variant	17.364965105453717	1.7418937515398478	3				NaN	NaN	0	NaN	6683	4717	11399
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11414	33.917	NaN	9910.4	30	0	4800.7	0.146	+			6683	AYVHMVTHF	9	65	368.8483530780923	1103.523229834477	3	368.84808349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AYVHMVTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	60.29395666154354	0.21116425950210296	3				NaN	NaN	0	NaN	6692	4720	11413
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11434	33.968	NaN	6332	30	0	1840.5	0.214	+			50967	YIHVGAQL	8	56	450.7508192564504	899.4870855797009	2	450.7500915527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YIHVGAQL_	ENSG00000176658|ENST00000318217|MYO1D	81.71599410873499	0.3092752145733545	3				NaN	NaN	0	NaN	6706	4726	11433
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11435	33.971	NaN	1111.1	30	0	97.325	0.035	+			43731	TKYEELQI	8	39	512.2712992766895	NaN	0	512.2706298828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TKYEELQI_	CON__ENSEMBL:ENSBTAP00000038253;ENSG00000185479|ENST00000252252|KRT6B	47.657333605630114	1.7418937515398478	3				NaN	NaN	0	NaN	6707	4726	11433
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11447	34.007	NaN	3416.1	30	0	331.4	0.214	+			39646	STIEYVIQR	9	66	554.8040403049323	1107.5935276766645	2	554.802978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STIEYVIQR_	ENSG00000101310|ENST00000650089|SEC23B	124.08010499294276	0.018729767491916592	3				NaN	NaN	0	NaN	6713	4732	11446
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11448	34.011	NaN	1009.2	30	0	86.719	0.035	+			25110	LLPPRDLSP	9	46	336.534209998025	NaN	0	336.5344543457031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LLPPRDLSP_	ENSG00000181652|ENST00000639579|ATG9B;nc|ENSG00000181652|Q674R7-2|ATG9B	20.481830146152948	0.3676602570045296	3				NaN	NaN	0	NaN	6714	4732	11446
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11458	34.034	NaN	2507.4	30	0	386.3	0.214	+			34882	RYVMTTTTL	9	44	543.2865134988303	NaN	0	543.2869873046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RYVMTTTTL_	ENSG00000134001|ENST00000256383|EIF2S1	30.317721548370564	0.32449924987115025	3				NaN	NaN	0	NaN	6721	4735	11457
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11459	34.038	NaN	3987.8	30	0	573.17	0.037			+	9376	EKDQKEKLK	9	59	573.3303365469376	1144.646120160675	2	573.330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EKDQKEKLK_	REV__ENSG00000148513|ENST00000361713|ANKRD30A;REV__ENSG00000180777|ENST00000690538|ANKRD30B;REV__nc|ENSG00000180777|Q9BXX2|ANKRD30B	82.7504851949679	0.08565546331141553	3				NaN	NaN	0	NaN	6722	4735	11457
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11471	34.063	NaN	9646.9	30	0	1297.9	0.214	+			41285	SVLLFVTKK	9	76	517.834122076396	1033.653691219592	2	517.8341064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVLLFVTKK_	ENSG00000198231|ENST00000389924|DDX42;ENST00000578593.1_1_17:61889231-61895755:+|nuORF;nc|ENSG00000198231|Q86XP3-2|DDX42	160.8219353732433	0.004346709298329381	3				NaN	NaN	0	NaN	6731	4738	11470
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11472	34.067	NaN	2689	30	0	727.96	0.106			+	-1	QACLTALRCP	10	49	566.782882930274	1131.551212927348	2	566.783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_QACLTALRC(Carbamidomethyl (C))P_	REV__ENSG00000166311|ENST00000342245|SMPD1;REV__ENST00000534405.5_1_11:6413241-6415834:+|nuORF;REV__nc|ENSG00000166311|P17405-2|SMPD1;REV__nc|ENSG00000166311|P17405-3|SMPD1;REV__nc|ENSG00000166311|P17405-4|SMPD1	35.15202426646627	0.5927656479315102	3				NaN	NaN	0	NaN	6732	4738	11470
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11473	34.069	NaN	1487.5	30	0	543.37	0.106			+	44303	TSDASSKRPSP	11	39	378.19078261117625	1131.5505184337287	3	378.19091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TSDASSKRPSP_	REV__ENSG00000134982|ENST00000257430|APC;REV__nc|ENSG00000134982|P25054-2|APC;REV__nc|ENSG00000134982|P25054-3|APC	30.568863376406313	0.6691487505135859	3				NaN	NaN	0	NaN	6733	4738	11470
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11474	34.071	NaN	1127.9	30	0	147.08	0.037				-1	VYKLCTQTI	9	39	563.3026567762967	1124.5907606193932	2	563.3024291992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_VYKLC(Carbamidomethyl (C))TQTI_	ENST00000570041.1_2_16:53532500-53534232:-|nuORF	37.81151784470057	0.4459294069877048	3				NaN	NaN	0	NaN	6734	4738	11470
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11485	34.096	NaN	2366.5	30	0	195.01	0.214			+	13351	GKTRVMGGLK	10	54	531.8086235355951	1061.60269413799	2	531.8086547851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_GKTRVM(Oxidation (M))GGLK_	REV__ENST00000454429.2_1_9:33799890-33818714:-|nuORF	42.86426827375447	0.522752283233888	3				NaN	NaN	0	NaN	6742	4741	11484
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11486	34.1	NaN	2100.3	30	0	739.24	0.034			+	1962	AIVLNKEH	8	46	462.26959368746634	922.5246344417327	2	462.2688903808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AIVLNKEH_	REV__ENSG00000100731|ENST00000304743|PCNX1;REV__nc|ENSG00000100731|Q96RV3-3|PCNX1;REV__nc|ENSG00000100731|Q96RV3-4|PCNX1	57.81127852772723	0.5234495074909924	3				NaN	NaN	0	NaN	6743	4741	11484
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11523	34.205	NaN	3622.4	30	0	497.08	0.145	+			24802	LILMMHHARKF	11	58	698.8905029296875	NaN	0	698.8905029296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LILMMHHARKF_	ENST00000401605.5_1_2:29344333-29354210:+|nuORF;ENST00000401617.6_1_2:29320804-29354210:+|nuORF;ENST00000438819.1_2_2:29353616-29354210:+|nuORF;ENST00000471165.1_1_2:29353708-29354210:+|nuORF	14.086013023434994	0.456735970842152	3				NaN	NaN	0	NaN	6765	4756	11522
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11532	34.228	NaN	2815.4	30	0	522.29	0.145	+			9748	ENFFLVLGIDA	11	59	619.3297625111308	NaN	0	619.3294677734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ENFFLVLGIDA_	ENSG00000140104|ENST00000547315|CLBA1;ENST00000549584.5_1_14:105453158-105465563:+|nuORF	30.139142570347243	0.4310986225962497	3				NaN	NaN	0	NaN	6771	4759	11531
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11541	34.25	NaN	1661	30	0	317.23	0.145	+			51303	YSDDTLKQL	9	48	541.7716064453125	NaN	0	541.7716064453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YSDDTLKQL_	ENSG00000132199|ENST00000647584|ENOSF1;ENST00000578651.5_1_18:683014-712587:-|nuORF;ENST00000585004.5_1_18:688572-706535:-|nuORF;nc|ENSG00000132199|Q7L5Y1-2|ENOSF1;nc|ENSG00000132199|Q7L5Y1-4|ENOSF1;nc|ENSG00000132199|Q7L5Y1-5|ENOSF1;nc|ENSG00000132199|Q7L5Y1-6|ENOSF1	44.377184641726394	0.24544280798894275	3				NaN	NaN	0	NaN	6777	4762	11540
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11556	34.29	NaN	3924	30	0	1305.8	0.145			+	6526	AYDGNLHTIT	10	53	368.8483530780923	1103.523229834477	3	368.84796142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AYDGNLHTIT_	REV__CDH4|p.R666H|1|0.12|ENSG00000179242|chr20:61928415-61928415|G/A|missense_variant	33.921630207806714	0.6028135429846169	3				NaN	NaN	0	NaN	6786	4768	11555
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11568	34.317	NaN	1360.2	30	0	138.03	0.144	+			4453	ATIMGVRFK	9	46	511.7946436766979	NaN	0	511.79425048828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATIMGVRFK_	ENSG00000096092|ENST00000211314|TMEM14A	46.45678178249821	0.2311111838007999	3				NaN	NaN	0	NaN	6795	4771	11567
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11587	34.364	NaN	1633.2	30	0	251.62	0.144			+	-1	ASLMIRSDF	9	46	528.2631225585938	NaN	0	528.2631225585938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ASLM(Oxidation (M))IRSDF_	REV__BRWD1|p.A1391Rfs*13|1|0.54|ENSG00000185658|chr21:39210022-39210022|T/-|frameshift_variant;REV__BRWD1|p.D556Vfs*9|1|0.08|ENSG00000185658|chr21:39264678-39264679|-/TCCA|frameshift_variant;REV__BRWD1|p.M1415Nfs*7|1|0.21|ENSG00000185658|chr21:39206228-39206229|-/T|frameshift_variant;REV__BRWD1|p.R1901Kfs*6|1|0.34|ENSG00000185658|chr21:39197367-39197368|-/T|frameshift_variant;REV__BRWD1|p.S1307Kfs*9|1|0.39|ENSG00000185658|chr21:39210910-39210911|-/T|frameshift_variant;REV__ENSG00000185658|ENST00000342449|BRWD1;REV__nc|ENSG00000185658|Q9NSI6-3|BRWD1;REV__nc|ENSG00000185658|Q9NSI6|BRWD1	27.882242232435846	0.3367954786602879	3				NaN	NaN	0	NaN	6808	4777	11586
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11601	34.403	NaN	4765.4	30	0	453.68	0.147			+	10008	ERPPEKLYRWQ	11	50	751.3983764648438	NaN	0	751.3983764648438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ERPPEKLYRWQ_	REV__VSTM2B|p.W66R|1|0.34|ENSG00000187135|chr19:29527324-29527324|T/C|missense_variant	12.206681093483082	0.456735970842152	3				NaN	NaN	0	NaN	6816	4783	11600
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11609	34.425	NaN	5638.6	30	0	421.07	0.211			+	-1	LFFFVFFCFCW	11	77	810.3680919037969	NaN	0	810.369384765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_LFFFVFFC(Carbamidomethyl (C))FC(Carbamidomethyl (C))W_	REV__ENST00000369626.7_1_1:113455414-113455516:-|nuORF	6.735540347417125	0.456735970842152	3				NaN	NaN	0	NaN	6821	4786	11608
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11610	34.428	NaN	4732.8	30	0	508.09	0.041			+	24889	LKKYRPYSRDS	11	64	706.8877563476562	NaN	0	706.8877563476562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LKKYRPYSRDS_	REV__tr|U7SHC5|U7SHC5_FUSNUtRNA(guanine-N(7)-)-methyltransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=trmBPE=3SV=1	20.83715455343099	0.456735970842152	3				NaN	NaN	0	NaN	6822	4786	11608
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11630	34.477	NaN	784.34	30	0	86.156	0.143			+	47187	VLVLDHIQA	9	37	336.5342852694845	NaN	0	336.53436279296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VLVLDHIQA_	REV__ENSG00000204388|ENST00000375650|HSPA1B;REV__ENSG00000204389|ENST00000375651|HSPA1A;REV__nc|ENSG00000204389|P0DMV8-2|HSPA1A	19.359975847455235	0.3714571876404798	3				NaN	NaN	0	NaN	6836	4792	11629
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11638	34.499	NaN	2013.1	30	0	158.5	0.143	+			37901	SPALNMHLV	9	48	491.2630549156664	980.5115568981328	2	491.2619934082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SPALNMHLV_	ENSG00000166454|ENST00000299575|ATMIN;ENST00000562969.1_1_16:81069676-81075119:+|nuORF	40.77816245573522	0.41113185337114944	3				NaN	NaN	0	NaN	6841	4795	11637
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11658	34.549	NaN	3128.5	30	0	465.21	0.142	+			15749	GVSLMTVPK	9	40	466.26810480747	930.5216566817401	2	466.26788330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVSLMTVPK_	ENST00000284202.8_1_18:22006682-22007982:+|nuORF	85.16082228582465	0.07850854922700509	3				NaN	NaN	0	NaN	6855	4801	11657
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11678	34.598	NaN	4330.2	30	0	357	0.211			+	-1	PCSRHRYFYWR	11	70	814.3865966796875	NaN	0	814.3865966796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_PC(Carbamidomethyl (C))SRHRYFYWR_	REV__ENSG00000103269|ENST00000352681|RHBDL1;REV__ENST00000450775.2_1_16:725790-727700:+|nuORF;REV__nc|ENSG00000103269|O75783|RHBDL1	9.705651100619752	0.456735970842152	3				NaN	NaN	0	NaN	6869	4807	11677
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11679	34.601	NaN	1449.4	30	0	108.4	0.035	+			6396	AVVGAVVFQK	10	42	509.3083787540302	1016.6022045748604	2	509.3101501464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVVGAVVFQK_	ENSG00000169223|ENST00000303127|LMAN2;ENST00000504071.1_1_5:176759089-176761465:-|nuORF;ENST00000515209.5_1_5:176759089-176761331:-|nuORF	79.45101966838831	0.2001060845487004	3				NaN	NaN	0	NaN	6870	4807	11677
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11714	34.701	NaN	1924.9	30	0	169.12	0.143	+			12831	GENKMGQLGL	10	61	523.7684179985404	1045.5222830638806	2	523.7684326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GENKMGQLGL_	ENSG00000179051|ENST00000375436|RCC2;ENST00000405832.2_1_6:56297536-56297638:-|nuORF;ENST00000526625.2_1_11:62139723-62139795:+|nuORF;RCC2|p.A423Qfs*56|1|0.13|ENSG00000179051|chr1:17413120-17413120|T/-|frameshift_variant	114.8945686534367	0.03454040281423369	3				NaN	NaN	0	NaN	6890	4822	11713
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11731	34.748	NaN	2087.3	30	0	405.19	0.145				-1	RCRAILQVHC	10	44	628.3307356507139	NaN	0	628.3305053710938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_RCRAILQVHC(Carbamidomethyl (C))_	ENSG00000159882|ENST00000429154|ZNF230;ENST00000585568.5_1_19:44513139-44515613:+|nuORF	35.61828744233558	0.3832230071539346	3				NaN	NaN	0	NaN	6901	4828	11730
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11741	34.771	NaN	1696	30	0	257.91	0.144	+			46126	VDKRELIAL	9	47	528.8244817804851	NaN	0	528.8246459960938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VDKRELIAL_	ENSG00000112249|ENST00000369162|ASCC3	30.317721548370564	0.32449924987115025	3				NaN	NaN	0	NaN	6908	4831	11740
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11747	34.789	NaN	2277.3	30	0	222.33	0.214	+			14699	GTIGLALAR	9	46	436.27148758884374	NaN	0	436.27117919921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTIGLALAR_	ENSG00000099899|ENST00000252136|TRMT2A;ENST00000487668.5_1_22:20100432-20101310:-|nuORF;ENST00000494820.5_1_22:20100432-20103278:-|nuORF;nc|ENSG00000099899|Q8IZ69-2|TRMT2A	96.19043198914106	0.029117245125711146	3				NaN	NaN	0	NaN	6911	4834	11746
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11748	34.793	NaN	6012.7	30	0	444.13	0.106			+	-1	TKQHCRERWHH	11	59	787.882080078125	NaN	0	787.882080078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_TKQHC(Carbamidomethyl (C))RERWHH_	REV__ENSG00000179938|ENST00000567927|GOLGA8J;REV__nc|ENSG00000291004|A6NC78|GOLGA8IP	8.235088202721068	0.456735970842152	3				NaN	NaN	0	NaN	6912	4834	11746
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11749	34.795	NaN	4877	30	0	876.34	0.04			+	-1	NQGNMKHYLGC	11	57	669.2890014648438	NaN	0	669.2890014648438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_NQGNM(Oxidation (M))KHYLGC(Carbamidomethyl (C))_	REV__ENSG00000102145|ENST00000376670|GATA1;REV__ENSG00000107485|ENST00000379328|GATA3;REV__ENSG00000179348|ENST00000341105|GATA2;REV__GATA2|p.F428Sfs*49|1|0.22|ENSG00000179348|chr3:128481181-128481181|G/-|frameshift_variant;REV__GATA3|p.V378Cfs*26|1|0.31|ENSG00000107485|chr10:8073817-8073817|A/-|frameshift_variant;REV__nc|ENSG00000102145|P15976-2|GATA1;REV__nc|ENSG00000102145|P15976-3|GATA1;REV__nc|ENSG00000107485|P23771|GATA3;REV__nc|ENSG00000179348|P23769-2|GATA2	19.996771675451527	0.456735970842152	3				NaN	NaN	0	NaN	6913	4834	11746
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11762	34.832	NaN	5365.5	30	0	704.87	0.146			+	26881	LWLVFAMKIEY	11	62	706.8887468778117	NaN	0	706.8876342773438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LWLVFAMKIEY_	REV__ENSG00000168476|ENST00000306306|REEP4;REV__ENST00000519074.5_1_8:21996670-21998995:-|nuORF;REV__nc|ENSG00000168476|Q9H6H4-2|REEP4	24.519189625965996	0.45614437233802635	3				NaN	NaN	0	NaN	6920	4840	11761
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11771	34.853	NaN	9409.3	30	0	1134.7	0.143	+			5712	AVFGVIGSQK	10	63	503.29036008822874	1004.5661672432575	2	503.28985595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVFGVIGSQK_	ENSG00000065183|ENST00000349139|WDR3;WDR3|p.A919Cfs*2|1|0.38|ENSG00000065183|chr1:117959363-117959364|-/T|frameshift_variant;WDR3|p.K204Sfs*12|1|0.29|ENSG00000065183|chr1:117939505-117939505|A/-|frameshift_variant;WDR3|p.T410Ifs*46|1|0.05|ENSG00000065183|chr1:117943526-117943527|-/TAAATGTT|frameshift_variant	75.04331003522576	0.23611669241777622	3				NaN	NaN	0	NaN	6926	4843	11770
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11780	34.877	NaN	3256.3	30	0	668.89	0.144	+			1188	AENPGKYNIL	10	51	559.7965394331243	1117.5785259330485	2	559.79638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AENPGKYNIL_	ENSG00000153187|ENST00000640218|HNRNPU;nc|ENSG00000153187|Q00839-2|HNRNPU	36.446750945000026	0.5818864909973037	3				NaN	NaN	0	NaN	6932	4846	11779
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11788	34.898	NaN	1353.9	30	0	368.7	0.142			+	1493	AFRVSRSSG	9	43	483.76056702783785	965.5065811224757	2	483.7603759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AFRVSRSSG_	REV__CON__P78386;REV__ENSG00000135443|ENST00000257901|KRT85	37.15910966729921	0.4535818937225704	3				NaN	NaN	0	NaN	6937	4849	11787
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11822	34.993	NaN	3333	30	0	462.7	0.214	+			12757	GELGNGNIKL	10	52	507.7829747435771	1013.5513965539542	2	507.7823791503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GELGNGNIKL_	ENSG00000132646|ENST00000379143|PCNA	58.22992032128504	0.38193887838457763	3				NaN	NaN	0	NaN	6959	4861	11821
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11823	34.996	NaN	2346.5	30	0	395.8	0.106			+	25965	LSINSAATPI	10	50	493.7799482978952	985.5453436625904	2	493.7788391113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSINSAATPI_	REV__ENSG00000064313|ENST00000378164|TAF2;REV__TAF2|p.A1003Lfs*3|1|0.21|ENSG00000064313|chr8:119746807-119746807|T/-|frameshift_variant;REV__TAF2|p.I604Sfs*3|1|0.11|ENSG00000064313|chr8:119785250-119785250|T/-|frameshift_variant	41.42661286455405	0.5359995577334734	3				NaN	NaN	0	NaN	6960	4861	11821
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11824	34.998	NaN	1479.6	30	0	250.17	0.034			+	23653	LARQLSYI	8	51	482.28470563355853	962.5548583339171	2	482.28448486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LARQLSYI_	REV__ENSG00000159459|ENST00000290650|UBR1;REV__nc|ENSG00000159459|Q8IWV7-2|UBR1;REV__UBR1|p.P1614Hfs*32|1|0.22|ENSG00000159459|chr15:42952443-42952443|G/-|frameshift_variant	57.81127852772723	0.5234495074909924	3				NaN	NaN	0	NaN	6961	4861	11821
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11831	35.016	NaN	2017.9	30	0	266.33	0.144	+			15288	GTVAGAAVLLK	11	55	500.3139637829306	998.6133746326612	2	500.3134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTVAGAAVLLK_	ENSG00000160439|ENST00000415061|RDH13;ENST00000589305.5_1_19:55562362-55574430:-|nuORF	134.7655990226056	0.0009242020891078561	3				NaN	NaN	0	NaN	6965	4864	11830
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11842	35.043	NaN	2033.5	30	0	302.08	0.145	+			8484	EASKYIMQY	9	58	566.7712602075022	1131.5279674818044	2	566.771728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EASKYIMQY_	ENSG00000176658|ENST00000318217|MYO1D	51.33545320467046	0.2872990594074956	3				NaN	NaN	0	NaN	6973	4867	11841
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11853	35.07	NaN	1641.9	30	0	187.55	0.144	+			6570	AYLEAHETF	9	47	540.753896231363	NaN	0	540.7542114257812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AYLEAHETF_	ENSG00000111581|ENST00000229179|NUP107;nc|ENSG00000111581|P57740-2|NUP107;nc|ENSG00000111581|P57740-3|NUP107	57.81127852772723	0.15865383123342353	3				NaN	NaN	0	NaN	6981	4870	11852
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11864	35.105	NaN	4108.5	30	0	400.07	0.145			+	26886	LWQDLVAARRW	11	61	707.391845703125	NaN	0	707.391845703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LWQDLVAARRW_	REV__ENSG00000177854|ENST00000369982|TMEM187	23.52269567125451	0.456735970842152	3				NaN	NaN	0	NaN	6986	4876	11863
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11874	35.13	NaN	1610.3	30	0	162.61	0.144	+			2932	ASCTVILKY	9	55	527.7837116798881	1053.5528704265762	2	527.7843017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_ASC(Carbamidomethyl (C))TVILKY_	ENST00000463441.5_1_7:150020319-150023055:+|nuORF;ENST00000493307.1_1_7:150020428-150023055:+|nuORF	69.6276240434122	0.14239879520340665	3				NaN	NaN	0	NaN	6993	4879	11873
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11893	35.178	NaN	850.3	30	0	87.908	0.143			+	12212	GARLANHRI	9	41	336.5342852694845	NaN	0	336.5346984863281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GARLANHRI_	REV__BAZ1B|p.A1298Cfs*10|1|0.16|ENSG00000009954|chr7:73444083-73444084|-/G|frameshift_variant;REV__BAZ1B|p.E800Kfs*16|1|0.08|ENSG00000009954|chr7:73477067-73477067|C/-|frameshift_variant;REV__ENSG00000009954|ENST00000339594|BAZ1B;REV__nc|ENSG00000009954|Q9UIG0-2|BAZ1B	24.20275056022122	0.35506675290109213	3				NaN	NaN	0	NaN	7006	4885	11892
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11906	35.216	NaN	6371.7	30	0	687.26	0.146			+	-1	IWKPPCRLMRP	11	76	706.888864686609	NaN	0	706.8911743164062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_IWKPPCRLM(Oxidation (M))RP_	REV__ENST00000508745.1_1_5:36705784-36725253:-|nuORF	25.57405402267927	0.45144328854727944	3				NaN	NaN	0	NaN	7013	4891	11905
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11934	35.291	NaN	14586	30	0	3247.4	0.214	+			4537	ATLAAVLQR	9	76	471.7904679420001	941.5663829508002	2	471.78997802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATLAAVLQR_	ENSG00000159399|ENST00000290573|HK2	131.03138772384656	0.014687601201650916	3				NaN	NaN	0	NaN	7032	4900	11933
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11935	35.295	NaN	2695.3	30	0	539.28	0.034			+	43631	TIPHTSFI	8	50	458.25093481757887	914.4873167019578	2	458.250244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TIPHTSFI_	REV__ENST00000265069.12_1_5:32354674-32354827:-|nuORF	52.29916861842294	0.578018602984656	3				NaN	NaN	0	NaN	7033	4900	11933
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11944	35.315	NaN	1191	30	0	125.18	0.143			+	36703	SGSFIFLVL	9	32	491.78304443020033	981.5515359272007	2	491.78179931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SGSFIFLVL_	REV__ENSG00000231861|ENST00000427338|OR5K2;REV__ENSG00000232382|ENST00000642057|OR5K1;REV__OR5K2|p.F257Sfs*24|1|0.43|ENSG00000231861|chr3:98498444-98498444|T/-|frameshift_variant	23.04248740728303	0.5879033540491928	3				NaN	NaN	0	NaN	7039	4903	11943
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11953	35.336	NaN	1311.3	30	0	244.16	0.143			+	30230	PSSSFRLSL	9	49	497.273011719725	992.53147050625	2	497.7737121582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PSSSFRLSL_	REV__ENST00000360525.8_1_21:38444831-38445389:-|nuORF	36.446750945000026	0.4619375763483977	3				NaN	NaN	0	NaN	7045	4906	11952
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11960	35.355	NaN	2119.1	30	0	302.2	0.145	+			46422	VERDSRLLGF	10	44	596.3271956231789	NaN	0	596.32763671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VERDSRLLGF_	ENSG00000162639|ENST00000651461|HENMT1	47.657333605630114	0.3204131577145918	3				NaN	NaN	0	NaN	7049	4909	11959
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11984	35.422	NaN	1084.1	30	0	156.74	0.144	+			28636	NLCLIPYMQ	9	35	547.7716652075626	1093.528777481925	2	547.770751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NLCLIPYMQ_	L1MB4_dup8351|chr19:41723964-41725199:-|4.338323541633806|0.1814582314154843|4.58|482.0|40|3|sense	23.04248740728303	0.5879033540491928	3				NaN	NaN	0	NaN	7064	4918	11983
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	11990	35.44	NaN	1100	30	0	164.7	0.141			+	30361	PVEPARVL	8	37	440.76659483437555	NaN	0	440.7666320800781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PVEPARVL_	REV__ENSG00000154719|ENST00000352957|MRPL39;REV__nc|ENSG00000154719|Q9NYK5-2|MRPL39	42.47446043378293	1.7418937515398478	3				NaN	NaN	0	NaN	7067	4921	11989
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12004	35.479	NaN	1916.7	30	0	317.04	0.143			+	28265	NDQFKGKVL	9	39	524.7929174817427	1047.5712820302854	2	524.793212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NDQFKGKVL_	REV__ENSG00000084764|ENST00000233121|MAPRE3;REV__ENSG00000101367|ENST00000375571|MAPRE1;REV__nc|ENSG00000084764|Q9UPY8-2|MAPRE3	71.29570347882199	0.13518600952103718	3				NaN	NaN	0	NaN	7075	4927	12003
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12020	35.522	NaN	1735.3	30	0	154.11	0.214	+			19883	KEESIVSSL	9	44	496.2693814204924	990.5242099077848	2	496.2685852050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEESIVSSL_	ENSG00000242247|ENST00000263245|ARFGAP3;nc|ENSG00000242247|Q9NP61-2|ARFGAP3	65.46538089061403	0.16805504838372562	3				NaN	NaN	0	NaN	7085	4933	12019
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12021	35.526	NaN	2687.9	30	0	480.63	0.039				-1	 	0	44	654.3180303956552	653.3107539290552	1	654.3192138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7086	4933	12019
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12027	35.542	NaN	2004.4	30	0	248.54	0.214			+	27406	MKSGRTSRR	9	43	539.7985802341772	1077.5826075351542	2	539.7990112304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MKSGRTSRR_	REV__ENSG00000165269|ENST00000297988|AQP7;REV__ENSG00000259916|ENST00000561882|AQP7B;REV__nc|ENSG00000259916|A0A075B734|AQP7B;REV__nc|ENSG00000279688|A6NL99|AQP7P3	39.252832667884924	0.4290233611298554	3				NaN	NaN	0	NaN	7089	4936	12026
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12028	35.546	NaN	1985.7	30	0	193.5	0.037	+			11536	FPFHEVTATH	10	40	593.2867296241467	1184.5589063150933	2	593.2860107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FPFHEVTATH_	nc|ENSG00000182362|P58557-2|YBEY	15.641811463095205	0.7369665665077569	3				NaN	NaN	0	NaN	7090	4936	12026
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12034	35.562	NaN	3679.2	30	0	319.73	0.146	+			50198	WLRSAAWNRPR	11	55	706.8880276429499	1411.7615023526996	2	706.8890991210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WLRSAAWNRPR_	ENST00000311626.8_1_17:46629537-46651367:-|nuORF	17.468008924990375	0.788697330333842	3				NaN	NaN	0	NaN	7093	4939	12033
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12041	35.58	NaN	2790.1	30	0	298.65	0.146				-1	KLYMRRLLCLP	11	55	711.4075590138938	NaN	0	711.407958984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_KLYM(Oxidation (M))RRLLCLP_	ENSG00000166046|ENST00000299045|TCP11L2	19.996771675451527	0.456735970842152	3				NaN	NaN	0	NaN	7097	4942	12040
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12073	35.679	NaN	1500.2	30	0	132.05	0.144	+			28087	NAFEVAEKY	9	55	535.7605384178214	NaN	0	535.7608642578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAFEVAEKY_	ENSG00000130402|ENST00000252699|ACTN4;ENST00000588618.5_1_19:39138385-39212431:+|nuORF	54.722347961057174	0.17414871455573902	3				NaN	NaN	0	NaN	7114	4957	12072
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12086	35.717	NaN	1819.5	30	0	457.63	0.144	+			25113	LLPSLMKDF	9	39	532.2963950879383	NaN	0	532.296142578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LLPSLMKDF_	tr|U7SGM1|U7SGM1_FUSNUHTHlysR-typedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02239PE=3SV=1	27.882242232435846	0.3367954786602879	3				NaN	NaN	0	NaN	7121	4963	12085
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12101	35.76	NaN	2449.3	30	0	329.53	0.144	+			28803	NPHSQGLVTF	10	56	550.2805939757241	1098.546635018248	2	550.280517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NPHSQGLVTF_	ENSG00000167608|ENST00000619895|TMC4;nc|ENSG00000167608|Q7Z404-1|TMC4;nc|ENSG00000167608|Q7Z404|TMC4;TMC4|p.F240Lfs*221|1|0.42|ENSG00000167608|chr19:54168267-54168268|AA/-|frameshift_variant;TMC4|p.Q383Rfs*6|1|0.37|ENSG00000167608|chr19:54163872-54163872|G/-|frameshift_variant	44.377184641726394	0.5088115166961078	3				NaN	NaN	0	NaN	7130	4969	12100
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12121	35.819	NaN	1381	30	0	137.21	0.214	+			36021	SEIFHSQSF	9	52	541.2514038085938	NaN	0	541.2514038085938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEIFHSQSF_	ENSG00000186522|ENST00000397712|SEPTIN10;ENST00000517342.1_1_8:57389388-57389772:-|nuORF;nc|ENSG00000186522|Q9P0V9-2|SEPTIN10;nc|ENSG00000186522|Q9P0V9-3|SEPTIN10	37.81151784470057	0.28666463014928195	3				NaN	NaN	0	NaN	7141	4978	12120
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12122	35.822	NaN	1388.3	30	0	194.74	0.034	+			28389	NELQKIII	8	43	485.80066541782054	969.5867779024411	2	485.7997741699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NELQKIII_	DNAH12|p.H2653Sfs*22|1|0.24|ENSG00000174844|chr3:57314595-57314596|-/A|frameshift_variant;ENSG00000174844|ENST00000495027|DNAH12;nc|ENSG00000174844|Q6ZR08-2|DNAH12;nc|ENSG00000174844|Q6ZR08-3|DNAH12;nc|ENSG00000174844|Q6ZR08|DNAH12	45.9519527083369	0.6193794311207887	3				NaN	NaN	0	NaN	7142	4978	12120
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12147	35.89	NaN	1497.8	30	0	118.17	0.135				-1	 	0	51	198.1851348876953	NaN	0	198.1851348876953	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7158	4987	12146
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12155	35.911	NaN	3656	30	0	430.66	0.146			+	37164	SIVRSHRQHRH	11	60	706.8887460594008	NaN	0	706.8896484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIVRSHRQHRH_	REV__CATSPER3|p.M125Vfs*21|1|0.4|ENSG00000152705|chr5:134996392-134996393|TA/-|frameshift_variant;REV__ENSG00000152705|ENST00000282611|CATSPER3;REV__ENST00000511235.1_1_5:134303666-134331399:+|nuORF	17.468008924990375	0.456735970842152	3				NaN	NaN	0	NaN	7163	4990	12154
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12168	35.949	NaN	2530	30	0	463.54	0.214	+			8232	EAEVDKLEL	9	44	523.2743268084504	1044.5341006837007	2	523.2747802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EAEVDKLEL_	ENSG00000182628|ENST00000330137|SKA2;ENST00000580541.1_1_17:57232479-57232524:-|nuORF;SKA2|p.K91Nfs*13|1|0.07|ENSG00000182628|chr17:59119343-59119343|T/-|frameshift_variant	37.81151784470057	0.4459294069877048	3				NaN	NaN	0	NaN	7170	4996	12167
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12169	35.952	NaN	1864.4	30	0	388.11	0.106	+			17462	ICIVYPCRC	9	37	535.2535074044368	1068.4924618756736	2	535.2532348632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ICIVYPCRC_	RXFP1|p.F518C|1|0.14|ENSG00000171509|chr4:158646998-158646998|T/G|missense_variant	26.79610172149135	0.5528238334041078	3				NaN	NaN	0	NaN	7171	4996	12167
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12170	35.954	NaN	1924.1	30	0	214.6	0.036				-1	MMFTLPKSL	9	49	550.2805939757241	1098.546635018248	2	550.2809448242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Oxidation (M)	_M(Oxidation (M))M(Oxidation (M))FTLPKSL_	MYBL2|p.S600F|1|0.25|ENSG00000101057|chr20:43713081-43713081|C/T|missense_variant	39.252832667884924	0.4290233611298554	3				NaN	NaN	0	NaN	7172	4996	12167
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12183	35.992	NaN	2099.6	30	0	325.04	0.145			+	-1	GCLIMLYLLL	10	55	605.3369188647866	NaN	0	605.337158203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))GCLIM(Oxidation (M))LYLLL_	REV__ENSG00000180475|ENST00000316770|OR10Q1;REV__OR10Q1|p.F35S|1|0.34|ENSG00000180475|chr11:58228772-58228772|A/G|missense_variant;REV__OR10Q1|p.V189Sfs*19|1|0.41|ENSG00000180475|chr11:58228311-58228311|C/-|frameshift_variant	19.359975847455235	0.4201028297492154	3				NaN	NaN	0	NaN	7179	5002	12182
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12189	36.01	NaN	1545.8	30	0	243.32	0.143			+	-1	KDCLKTII	8	41	495.7855061870579	989.5564594409158	2	496.28582763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_KDC(Carbamidomethyl (C))LKTII_	REV__ENSG00000186532|ENST00000305513|SMYD4	53.351449002276354	0.5676011784961348	3				NaN	NaN	0	NaN	7182	5005	12188
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12195	36.028	NaN	5132	30	0	905.11	0.214	+			120	AAFDGGFTVK	10	64	506.75845287980377	1011.5023528264076	2	506.7580261230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAFDGGFTVK_	ENSG00000102910|ENST00000285737|LONP2;ENST00000564259.1_1_16:48382051-48395504:+|nuORF;nc|ENSG00000102910|Q86WA8-2|LONP2	61.691277971877994	0.35045824941635534	3				NaN	NaN	0	NaN	7185	5008	12194
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12196	36.031	NaN	1932.7	30	0	345.48	0.106	+			51141	YNTDDKPEE	9	53	555.7350226535569	1109.4554923739138	2	555.735595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YNTDDKPEE_	tr|U7T0U1|U7T0U1_FUSNUDNA-directedRNApolymerasesubunitbeta'OS=FusobacteriumnucleatumCTI-5OX=1316586GN=rpoCPE=3SV=1	37.81151784470057	0.4459294069877048	3				NaN	NaN	0	NaN	7186	5008	12194
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12197	36.033	NaN	2105.8	30	0	238.59	0.106			+	-1	LGIVMIIPG	9	51	464.7795715054127	NaN	0	464.7815246582031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_LGIVM(Oxidation (M))IIPG_	REV__tr|U7SV79|U7SV79_FUSNUUracilpermeaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01162PE=3SV=1	29.841539824830324	0.32690339240668626	3				NaN	NaN	0	NaN	7187	5008	12194
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12198	36.035	NaN	1113.1	30	0	249.39	0.034			+	45232	TVPPNGGFAC	10	32	481.72439797331367	961.4342430134274	2	481.72412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TVPPNGGFAC_	REV__ENSG00000117877|ENST00000309424|POLR1G;REV__nc|ENSG00000117877|O15446-2|POLR1G	17.364965105453717	0.7282106878714807	3				NaN	NaN	0	NaN	7188	5008	12194
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12204	36.051	NaN	1706.9	30	0	393.34	0.215			+	1118	AELMQMCLGD	10	49	555.7350226535569	1109.4554923739138	2	556.236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AELMQMCLGD_	REV__nc|ENSG00000107731|Q8IZJ1-2|UNC5B	30.317721548370564	0.6322445173429027	3				NaN	NaN	0	NaN	7191	5011	12203
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12205	36.055	NaN	1404.8	30	0	229.87	0.036			+	-1	EAEVVCERC	9	43	547.7338167634521	NaN	0	547.7330322265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_EAEVVC(Carbamidomethyl (C))ERC_	REV__ENSG00000135253|ENST00000610776|KCP	29.14955571784316	0.3303970763161698	3				NaN	NaN	0	NaN	7192	5011	12203
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12228	36.107	NaN	2827.3	30	0	313.85	0.145	+			45570	TYMGHTGAVW	10	63	561.7557523937014	1121.4969518542027	2	561.7551879882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TYMGHTGAVW_	ENSG00000084623|ENST00000677711|EIF3I;ENST00000474371.1_1_1:32688150-32694122:+|nuORF;ENST00000489353.5_1_1:32688042-32691823:+|nuORF	44.116797842482775	0.5112108506279902	3				NaN	NaN	0	NaN	7209	5017	12227
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12251	36.162	NaN	2161.3	30	0	227.13	0.144	+			17598	IEFKETQAL	9	56	539.7930009349509	1077.5714489367017	2	539.7927856445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IEFKETQAL_	EIF4A2|p.Q209Lfs*23|1|0.03|ENSG00000156976|chr3:186786269-186786270|-/ACTGTCATTTCTAGATCTAC|frameshift_variant;ENSG00000156976|ENST00000323963|EIF4A2;ENST00000465032.5_1_3:186501384-186502902:+|nuORF;ENST00000465267.5_1_3:186501384-186502902:+|nuORF;ENST00000485101.5_1_3:186502728-186502902:+|nuORF;nc|ENSG00000156976|Q14240-2|EIF4A2	44.377184641726394	0.36891676396732553	3				NaN	NaN	0	NaN	7226	5023	12250
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12273	36.225	NaN	9130	30	0	1838.5	0.143	+			14893	GTLSSWNLK	9	63	503.2724230179678	1004.5302931027356	2	503.2716369628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTLSSWNLK_	ENST00000380319.2_1_X:15782817-15782931:+|nuORF;ENST00000380334.6_1_X:15706900-15721312:+|nuORF;ENST00000380336.5_1_X:15706900-15715389:+|nuORF;ENST00000435806.2_1_X:15706900-15713817:+|nuORF;nc|ENSG00000290746|Q8WTZ4|CA5BP1	129.42129120953632	0.01549634589885217	3				NaN	NaN	0	NaN	7239	5032	12272
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12294	36.284	NaN	4112.8	30	0	443.36	0.146	+			26897	LWVDRGKKTYF	11	70	706.8881446722294	1411.7617364112587	2	706.8887329101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LWVDRGKKTYF_	PIP5KL1|p.R192W|1|0.21|ENSG00000167103|chr9:127927317-127927317|G/A|missense_variant	19.1035232394073	0.7810393085260824	3				NaN	NaN	0	NaN	7251	5041	12293
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12300	36.3	NaN	3022.3	30	0	828.71	0.214				-1	 	0	54	516.3015787657164	515.2943022991163	1	516.3017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7254	5044	12299
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12301	36.304	NaN	1539.4	30	0	283.73	0.035			+	47362	VPESTIIDAT	10	39	523.2743268084504	1044.5341006837007	2	523.2747802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VPESTIIDAT_	REV__nc|ENSG00000266074|Q9P281|BAHCC1	15.641811463095205	0.7369665665077569	3				NaN	NaN	0	NaN	7255	5044	12299
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12316	36.345	NaN	1426.6	30	0	185.11	0.142	+			4585	ATLGALLQK	9	47	457.7875159290072	913.5604789248144	2	457.78717041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATLGALLQK_	ENSG00000144426|ENST00000683969|NBEAL1;NBEAL1|p.A1274Qfs*17|1|0.1|ENSG00000144426|chr2:203135766-203135766|A/-|frameshift_variant;NBEAL1|p.F1670Lfs*25|1|0.21|ENSG00000144426|chr2:203144843-203144843|T/-|frameshift_variant;NBEAL1|p.F2315Lfs*2|1|0.17|ENSG00000144426|chr2:203193900-203193900|T/-|frameshift_variant;NBEAL1|p.K2562Rfs*15|1|0.41|ENSG00000144426|chr2:203209306-203209306|A/-|frameshift_variant;NBEAL1|p.N2072Kfs*10|1|0.35|ENSG00000144426|chr2:203172825-203172826|-/A|frameshift_variant;NBEAL1|p.T1311Nfs*3|1|0.08|ENSG00000144426|chr2:203135875-203135876|-/A|frameshift_variant;nc|ENSG00000144426|Q6ZS30-1|NBEAL1;nc|ENSG00000144426|Q6ZS30|NBEAL1	62.107414245175825	0.1960472003779324	3				NaN	NaN	0	NaN	7264	5050	12315
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12337	36.416	NaN	1018.1	30	0	102.38	0.214			+	9600	ELLIILMY	8	46	336.5341110287601	NaN	0	336.5341796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ELLIILMY_	REV__ENST00000599328.1_1_19:53744649-53744913:-|nuORF	21.70233525837049	1.7418937515398478	3				NaN	NaN	0	NaN	7273	5062	12336
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12338	36.419	NaN	4139.5	30	0	511.55	0.04				-1	FFTCRKNVLLV	11	64	698.8917836226194	NaN	0	698.8914184570312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_FFTC(Carbamidomethyl (C))RKNVLLV_	ANGEL1|p.A34V|1|0.36|ENSG00000013523|chr14:76809607-76809607|G/A|missense_variant	19.1035232394073	0.456735970842152	3				NaN	NaN	0	NaN	7274	5062	12336
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12350	36.453	NaN	1730.5	30	0	186.64	0.142	+			45813	VAIIARTDL	9	48	486.29823993658937	970.5819269399788	2	486.298095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VAIIARTDL_	ENSG00000106348|ENST00000338791|IMPDH1;ENSG00000178035|ENST00000326739|IMPDH2;ENST00000469328.5_1_7:128033063-128040541:-|nuORF;ENST00000484496.5_1_7:128032984-128040541:-|nuORF;IMPDH1|p.A247Gfs*7|1|0.06|ENSG00000106348|chr7:128398490-128398491|-/C|frameshift_variant;nc|ENSG00000106348|P20839-2|IMPDH1;nc|ENSG00000106348|P20839-3|IMPDH1;nc|ENSG00000106348|P20839-4|IMPDH1;nc|ENSG00000106348|P20839-5|IMPDH1;nc|ENSG00000106348|P20839-7|IMPDH1;nc|ENSG00000106348|P20839|IMPDH1	96.19043198914106	0.047412499214244314	3				NaN	NaN	0	NaN	7280	5068	12349
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12364	36.493	NaN	1587.8	30	0	200.79	0.145			+	2332	AMPKFVEIAY	10	43	584.8048177432927	NaN	0	584.8032836914062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AMPKFVEIAY_	REV__ENSG00000132600|ENST00000441236|PRMT7;REV__ENST00000565356.5_1_16:68349816-68386396:+|nuORF;REV__nc|ENSG00000132600|Q9NVM4-4|PRMT7	25.57405402267927	0.4162033004763879	3				NaN	NaN	0	NaN	7288	5074	12363
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12380	36.558	NaN	985.13	30	0	91.408	0.143	+			23213	KYGALVNNF	9	40	513.2735595703125	NaN	0	513.2735595703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KYGALVNNF_	ENSG00000117481|ENST00000474844|NSUN4;ENST00000475281.1_1_1:46810505-46810817:+|nuORF;ENST00000495427.1_2_1:46810505-46812688:+|nuORF;nc|ENSG00000117481|Q96CB9-2|NSUN4;nc|ENSG00000117481|Q96CB9-4|NSUN4	34.172542307311794	0.30503706118289736	3				NaN	NaN	0	NaN	7292	5086	12379
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12407	36.639	NaN	3679.2	30	0	390.34	0.211	+			50339	WVDRGKKTYFI	11	68	706.8881446722294	1411.7617364112587	2	706.8906860351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WVDRGKKTYFI_	PIP5KL1|p.R192W|1|0.21|ENSG00000167103|chr9:127927317-127927317|G/A|missense_variant	17.468008924990375	0.788697330333842	3				NaN	NaN	0	NaN	7307	5098	12406
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12408	36.642	NaN	1943.3	30	0	374.77	0.035				-1	VAEGCHYY	8	46	499.70618077537557	997.3978086175512	2	499.70648193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_VAEGC(Carbamidomethyl (C))HYY_	ENST00000480891.5_1_17:12903567-12905599:-|nuORF	28.2542754592877	0.7411748056684583	3				NaN	NaN	0	NaN	7308	5098	12406
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12423	36.682	NaN	1614.5	30	0	259.72	0.142			+	1843	AIIVSTRPL	9	40	485.308469415916	968.6023858986321	2	485.3086242675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AIIVSTRPL_	REV__ENSG00000119514|ENST00000375011|GALNT12	51.33545320467046	0.2872990594074956	3				NaN	NaN	0	NaN	7317	5104	12422
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12427	36.698	NaN	2375.3	30	0	1081.9	0.143	+			35383	SAPYGRITL	9	46	489.2744738093093	976.5343946854186	2	489.2738037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAPYGRITL_	ENSG00000055163|ENST00000620254|CYFIP2;ENSG00000273749|ENST00000617928|CYFIP1;KBTBD2-CYFIP1|1|fusion;nc|ENSG00000055163|Q96F07|CYFIP2;nc|ENSG00000273749|Q7L576-2|CYFIP1;nc|ENSG00000273749|Q7L576-3|CYFIP1	23.52269567125451	0.5834155526130771	3				NaN	NaN	0	NaN	7318	5107	12426
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12443	36.749	NaN	9812.8	30	0	2430.9	0.214	+			34777	RYIPTAAAF	9	52	505.27717539683204	1008.5397978604641	2	505.27691650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RYIPTAAAF_	ENSG00000058262|ENST00000243253|SEC61A1;ENSG00000065665|ENST00000298428|SEC61A2;ENST00000498837.1_1_3:127786720-127788502:+|nuORF;nc|ENSG00000058262|P61619-3|SEC61A1;nc|ENSG00000065665|Q9H9S3-3|SEC61A2	39.252832667884924	0.4290233611298554	3				NaN	NaN	0	NaN	7325	5116	12442
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12444	36.753	NaN	3549.7	30	0	280.66	0.04				-1	YKCKQRGKAFI	11	72	699.889892578125	NaN	0	699.889892578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_YKC(Carbamidomethyl (C))KQRGKAFI_	ZNF490|p.C283R|1|0.17|ENSG00000188033|chr19:12581228-12581228|A/G|missense_variant	19.1035232394073	0.456735970842152	3				NaN	NaN	0	NaN	7326	5116	12442
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12465	36.821	NaN	3898.5	30	0	292.19	0.148				-1	WMQRMMRSRRR	11	68	805.41015625	NaN	0	805.41015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_WMQRM(Oxidation (M))MRSRRR_	ENST00000399325.2_1_X:133406709-133407198:+|nuORF	8.693696342081763	0.456735970842152	3				NaN	NaN	0	NaN	7335	5128	12464
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12482	36.876	NaN	1031.7	30	0	104.37	0.143			+	47188	VLVLDHIQA	9	47	336.5341616899234	NaN	0	336.5339660644531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VLVLDHIQA_	REV__ENSG00000204388|ENST00000375650|HSPA1B;REV__ENSG00000204389|ENST00000375651|HSPA1A;REV__nc|ENSG00000204389|P0DMV8-2|HSPA1A	19.359975847455235	0.3714571876404798	3				NaN	NaN	0	NaN	7343	5137	12481
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12518	36.989	NaN	4250.9	30	0	601.46	0.145			+	25047	LLKELYEKDVY	11	66	706.8881446722294	1411.7617364112587	2	706.8883666992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LLKELYEKDVY_	REV__ENSG00000204815|ENST00000377540|ODAD4;REV__ENST00000585530.1_1_17:40091759-40093269:+|nuORF;REV__nc|ENSG00000204815|Q96NG3-2|ODAD4	29.170058357718403	0.683821074385409	3				NaN	NaN	0	NaN	7361	5155	12517
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12525	37.009	NaN	1304.5	30	0	143.42	0.144	+			18435	ISCVNLAFK	9	54	526.2843718875986	1050.554190841997	2	526.2838745117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_ISC(Carbamidomethyl (C))VNLAFK_	ENST00000227758.6_3_11:102219989-102220022:+|nuORF	87.69643885390035	0.07135982304947239	3				NaN	NaN	0	NaN	7365	5158	12524
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12538	37.047	NaN	2970.1	30	0	632.5	0.143	+			41592	SVQGIIIYR	9	57	524.8112042358388	1047.6078555384775	2	524.8111572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVQGIIIYR_	ENSG00000005022|ENST00000317881|SLC25A5;ENSG00000151729|ENST00000281456|SLC25A4;ENSG00000169100|ENST00000381401|SLC25A6;ENST00000406156.2_1_6:121975405-121975696:+|nuORF;ENST00000435239.1_1_7:32511604-32512018:+|nuORF	74.1650062923329	0.12277912660386392	3				NaN	NaN	0	NaN	7372	5164	12537
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12543	37.063	NaN	2142.3	30	0	251.41	0.143			+	7150	DAEIKLTIQ	9	54	515.7926823014608	NaN	0	515.792236328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DAEIKLTIQ_	REV__CON__Q2UVX4	46.45678178249821	0.2311111838007999	3				NaN	NaN	0	NaN	7374	5167	12542
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12548	37.079	NaN	1595.3	30	0	349.97	0.145			+	-1	NAVSICAGLHK	11	49	585.3097534179688	NaN	0	585.3097534179688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_NAVSIC(Carbamidomethyl (C))AGLHK_	REV__HNRNPR|p.V239A|1|0.06|ENSG00000125944|chr1:23321623-23321623|A/G|missense_variant	35.15202426646627	0.40875833226131825	3				NaN	NaN	0	NaN	7376	5170	12547
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12566	37.136	NaN	1135.2	30	0	212.51	0.142			+	15834	GWFPFGGY	8	33	465.71146407117953	929.4083752091591	2	465.7110900878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GWFPFGGY_	REV__ENSG00000166959|ENST00000300226|MS4A8;REV__MS4A8|p.G177Vfs*2|1|0.28|ENSG00000166959|chr11:60708774-60708774|G/-|frameshift_variant;REV__MS4A8|p.H164Pfs*82|1|0.24|ENSG00000166959|chr11:60708733-60708734|-/C|frameshift_variant	16.704963439144045	0.7946246187734944	3				NaN	NaN	0	NaN	7385	5179	12565
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12570	37.152	NaN	1340.9	30	0	215.42	0.144	+			13931	GRRGPLGVQAA	11	36	541.315945287173	1080.617337641146	2	541.314697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GRRGPLGVQAA_	ENST00000282382.8_2_5:114961385-114961538:-|nuORF	25.57405402267927	0.7215402271931856	3				NaN	NaN	0	NaN	7386	5182	12569
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12588	37.211	NaN	3867.2	30	0	448.67	0.147				-1	VVHRMCRMYPE	11	58	755.344970703125	NaN	0	755.344970703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),2 Oxidation (M)	_VVHRM(Oxidation (M))C(Carbamidomethyl (C))RM(Oxidation (M))YPE_	ENSG00000015413|ENST00000690203|DPEP1;ENST00000564281.5_1_16:89680092-89704100:+|nuORF;ENST00000565249.5_1_16:89680092-89703400:+|nuORF	13.45404412870281	0.456735970842152	3				NaN	NaN	0	NaN	7395	5191	12587
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12625	37.325	NaN	1856.1	30	0	249.79	0.214	+			33378	RHTVTARQL	9	45	541.315945287173	1080.617337641146	2	541.8179931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RHTVTARQL_	nc|ENSG00000151914|Q03001-3|DST	31.529811441608018	0.5085848003137583	3				NaN	NaN	0	NaN	7414	5209	12624
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12626	37.328	NaN	1236.4	30	0	143.09	0.033	+			39108	SSTCGSHTV	9	37	439.6850611781271	NaN	0	439.68499755859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSTCGSHTV_	ENSG00000182263|ENST00000333129|FIGN;FIGN|p.T288Pfs*13|1|0.37|ENSG00000182263|chr2:163610971-163610971|G/-|frameshift_variant	17.364965105453717	0.37820932774828947	3				NaN	NaN	0	NaN	7415	5209	12624
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12638	37.364	NaN	5950.3	30	0	989.57	0.141	+			20207	KELGITAL	8	59	422.7607686949536	843.5069844567072	2	422.7602844238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KELGITAL_	ENSG00000164587|ENST00000407193|RPS14	56.72105179125745	0.5342425954139568	3				NaN	NaN	0	NaN	7421	5215	12637
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12654	37.427	NaN	3215.8	30	0	222.05	0.148			+	-1	RYYYLCYFPMK	11	54	802.3749389648438	NaN	0	802.3749389648438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_RYYYLC(Carbamidomethyl (C))YFPMK_	REV__ENSG00000094880|ENST00000394886|CDC23;REV__ENST00000471692.1_1_5:137527956-137534147:-|nuORF;REV__nc|ENSG00000094880|Q9UJX2-3|CDC23	2.92943323627438	0.456735970842152	3				NaN	NaN	0	NaN	7425	5227	12653
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12682	37.51	NaN	1811.2	30	0	276.27	0.214			+	17493	IDEASIAVHI	10	42	534.2906408951931	1066.566728857186	2	534.79248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IDEASIAVHI_	REV__ENSG00000101384|ENST00000254958|JAG1;REV__nc|ENSG00000101384|P78504-2|JAG1	21.9598887501803	0.7004979571547932	3				NaN	NaN	0	NaN	7441	5239	12681
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12683	37.514	NaN	4703.3	30	0	423	0.044	+			50276	WRPRYRYYHWA	11	78	827.4132443995251	NaN	0	827.4157104492188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WRPRYRYYHWA_	SLC12A6|p.F676Y|1|0.34|ENSG00000140199|chr15:34243989-34243989|A/T|missense_variant	2.92943323627438	0.456735970842152	3				NaN	NaN	0	NaN	7442	5239	12681
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12696	37.562	NaN	2980	30	0	304.25	0.143			+	10943	FDTLKEQL	8	58	497.264779731212	NaN	0	497.2647399902344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FDTLKEQL_	REV__ENSG00000155313|ENST00000400183|USP25;REV__ENST00000478932.1_1_21:17250099-17250791:+|nuORF;REV__nc|ENSG00000155313|Q9UHP3-1|USP25;REV__nc|ENSG00000155313|Q9UHP3|USP25;REV__USP25|p.L1009Cfs*58|1|0.32|ENSG00000155313|chr21:15878328-15878328|T/-|frameshift_variant	68.78682469695295	1.7418937515398478	3				NaN	NaN	0	NaN	7446	5248	12695
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12791	37.882	NaN	2289.7	30	0	187.49	0.214	+			168	AAIVAYGLYK	10	57	534.8083024525924	1067.6020519719848	2	534.8079223632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAIVAYGLYK_	ENSG00000181061|ENST00000321331|HIGD1A;ENST00000470543.1_1_3:42826765-42845976:-|nuORF;nc|ENSG00000181061|Q9Y241-2|HIGD1A	82.30502934623384	0.17678907142465278	3				NaN	NaN	0	NaN	7487	5302	12790
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12792	37.885	NaN	2803.1	30	0	296.54	0.035	+			51441	YVDPVNKVL	9	58	523.7976848186784	1045.5808167041566	2	523.7971801757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YVDPVNKVL_	ENSG00000140992|ENST00000342085|PDPK1;nc|ENSG00000140992|O15530-2|PDPK1;nc|ENSG00000140992|O15530-3|PDPK1;nc|ENSG00000140992|O15530-4|PDPK1	47.657333605630114	0.33044192980041115	3				NaN	NaN	0	NaN	7488	5302	12790
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12799	37.904	NaN	1172.1	30	0	136.09	0.143	+			43384	TGFRRKRS	8	52	336.5337899839187	NaN	0	336.53375244140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TGFRRKRS_	ENST00000564288.5_2_1:39670752-39696910:+|nuORF	18.324413293986947	1.7418937515398478	3				NaN	NaN	0	NaN	7492	5305	12798
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12820	37.973	NaN	2232.6	30	0	210.98	0.143	+			27825	MSREVLRR	8	48	523.7976848186784	1045.5808167041566	2	523.7984008789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MSREVLRR_	CHSY1|p.G651Vfs*14|1|0.08|ENSG00000131873|chr15:101177845-101177846|-/A|frameshift_variant;CHSY1|p.V225M|1|0.18|ENSG00000131873|chr15:101235225-101235225|C/T|missense_variant;ENSG00000131873|ENST00000254190|CHSY1	34.172542307311794	0.6954784234644539	3				NaN	NaN	0	NaN	7501	5317	12819
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12826	37.991	NaN	4810.3	30	0	327.28	0.149				-1	RQRWRFLVCMW	11	86	827.4151611328125	NaN	0	827.4151611328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_RQRWRFLVC(Carbamidomethyl (C))M(Oxidation (M))W_	ENST00000533632.5_1_11:118889473-118889533:+|nuORF	2.718429308559148	0.456735970842152	3				NaN	NaN	0	NaN	7504	5320	12825
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12856	38.096	NaN	1400.1	30	0	399.96	0.144			+	-1	MFMLCMKR	8	45	558.7644499929011	1115.514347052602	2	558.7635498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_MFMLC(Carbamidomethyl (C))MKR_	REV__MDN1|p.T4070M|1|0.36|ENSG00000112159|chr6:89680645-89680645|G/A|missense_variant	28.2542754592877	0.7411748056684583	3				NaN	NaN	0	NaN	7516	5338	12855
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12860	38.112	NaN	879.78	30	0	102.58	0.143			+	-1	PCRCPGSCN	9	44	497.18655801308864	NaN	0	496.78509521484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_PCRC(Carbamidomethyl (C))PGSCN_	REV__ENSG00000118523|ENST00000367976|CCN2;REV__nc|ENSG00000118523|P29279-2|CCN2	20.94693142431847	0.3660861156085067	3				NaN	NaN	0	NaN	7517	5341	12859
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12880	38.172	NaN	2738.6	30	0	461.17	0.143	+			13423	GLGLNFLQGP	10	60	508.2821641551575	1014.549775377115	2	508.2818603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GLGLNFLQGP_	CON__ENSEMBL:ENSBTAP00000016285	35.61828744233558	0.588957954432594	3				NaN	NaN	0	NaN	7528	5350	12879
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12892	38.21	NaN	2203.7	30	0	265.59	0.144	+			28102	NAFKEITTM	9	55	527.7655031174306	1053.5164533016612	2	527.7656860351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAFKEITTM_	ENSG00000137947|ENST00000370500|GTF2B;ENST00000486078.1_1_1:89325774-89329699:-|nuORF;ENST00000494819.5_1_1:89324456-89357188:-|nuORF	95.81516180277367	0.04847050768394289	3				NaN	NaN	0	NaN	7534	5356	12891
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12899	38.23	NaN	4664.1	30	0	826.58	0.142	+			12604	GEHTLLVTV	9	58	484.7743886322989	967.5342243313978	2	484.7740478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEHTLLVTV_	ENSG00000188186|ENST00000341942|LAMTOR4;ENST00000441173.1_1_7:99751392-99751584:+|nuORF	60.97194046774394	0.20551255781574032	3				NaN	NaN	0	NaN	7538	5359	12898
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12917	38.287	NaN	772.02	30	0	86.145	0.143			+	47189	VLVLDHIQA	9	36	336.5340198478977	NaN	0	336.5334167480469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VLVLDHIQA_	REV__ENSG00000204388|ENST00000375650|HSPA1B;REV__ENSG00000204389|ENST00000375651|HSPA1A;REV__nc|ENSG00000204389|P0DMV8-2|HSPA1A	19.359975847455235	0.3714571876404798	3				NaN	NaN	0	NaN	7547	5368	12916
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12924	38.307	NaN	1981.2	30	0	272.19	0.214	+			49496	VVYVGGILTK	10	50	524.8236312064882	1047.6327094797764	2	524.8233642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVYVGGILTK_	ENSG00000174607|ENST00000310836|UGT8	56.72105179125745	0.3956618550748046	3				NaN	NaN	0	NaN	7551	5371	12923
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12925	38.311	NaN	979.18	30	0	110.1	0.034	+			45794	VAGVLAHVY	9	33	464.7655944824219	NaN	0	464.7655944824219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VAGVLAHVY_	ENSG00000110900|ENST00000546076|TSPAN11	21.70233525837049	0.3635294413921169	3				NaN	NaN	0	NaN	7552	5371	12923
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12940	38.361	NaN	1913.1	30	0	704.59	0.214	+			45911	VAQKNYFNI	9	43	548.7935295763517	NaN	0	548.7935791015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VAQKNYFNI_	ENSG00000147364|ENST00000350302|FBXO25;nc|ENSG00000147364|Q8TCJ0-3|FBXO25;nc|ENSG00000147364|Q8TCJ0|FBXO25	27.882242232435846	0.3367954786602879	3				NaN	NaN	0	NaN	7558	5380	12939
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12941	38.365	NaN	5074.7	30	0	381.03	0.044			+	-1	FKWVCKQCRRW	11	90	827.4168701171875	NaN	0	827.4168701171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_FKWVC(Carbamidomethyl (C))KQC(Carbamidomethyl (C))RRW_	REV__ENSG00000162975|ENST00000295082|KCNF1	5.55782384252955	0.456735970842152	3				NaN	NaN	0	NaN	7559	5380	12939
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	12965	38.438	NaN	990.57	30	0	223.42	0.144	+			11660	FQNFIEIF	8	35	529.269943081492	NaN	0	529.268798828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FQNFIEIF_	ENSG00000131711|ENST00000296755|MAP1B;MAP1B|p.E2165Gfs*3|1|0.32|ENSG00000131711|chr5:72199841-72199842|-/C|frameshift_variant;MAP1B|p.E871Afs*22|1|0.13|ENSG00000131711|chr5:72195965-72195966|TG/-|frameshift_variant;MAP1B|p.P1789Hfs*34|1|0.31|ENSG00000131711|chr5:72198718-72198718|C/-|frameshift_variant;MAP1B|p.P752Tfs*35|2|0.37|ENSG00000131711|chr5:72195601-72195602|-/A|frameshift_variant;MAP1B|p.Y2023Afs*214|1|0.03|ENSG00000131711|chr5:72199421-72199422|-/GC|frameshift_variant	45.9519527083369	1.7418937515398478	3				NaN	NaN	0	NaN	7571	5392	12964
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13023	38.629	NaN	985.62	30	0	386.01	0.14	+			46013	VAVLLGGLA	9	29	406.7659201763594	811.5172874195188	2	406.765869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VAVLLGGLA_	ENSG00000103044|ENST00000569188|HAS3	29.841539824830324	0.5243625958137083	3				NaN	NaN	0	NaN	7599	5422	13022
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13028	38.645	NaN	1224	30	0	139.44	0.143			+	16389	HENKDIIL	8	31	491.2713592969073	NaN	0	491.2718505859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HENKDIIL_	REV__ACTR3B-JMJD1C|1|fusion;REV__ENSG00000171988|ENST00000399262|JMJD1C;REV__JMJD1C|p.A1206Efs*30|1|0.07|ENSG00000171988|chr10:63208052-63208053|-/GTAAAGTT|frameshift_variant;REV__JMJD1C|p.A2114Cfs*5|1|0.04|ENSG00000171988|chr10:63189399-63189400|-/T|frameshift_variant;REV__JMJD1C|p.I2113Kfs*18|1|0.04|ENSG00000171988|chr10:63189400-63189401|-/TT|frameshift_variant;REV__nc|ENSG00000171988|Q15652-2|JMJD1C;REV__nc|ENSG00000171988|Q15652-3|JMJD1C	30.503639358989545	1.7418937515398478	3				NaN	NaN	0	NaN	7601	5425	13027
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13045	38.712	NaN	903.08	30	0	132.33	0.214			+	43476	TGPALHTIVV	10	38	336.53404930593575	NaN	0	336.5339660644531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TGPALHTIVV_	REV__ENSG00000153048|ENST00000311052|CARHSP1	24.20275056022122	0.4201028297492154	3				NaN	NaN	0	NaN	7606	5437	13044
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13046	38.715	NaN	2109.5	30	0	343.35	0.036	+			8223	EAELKLRLK	9	40	550.3438258624948	NaN	0	550.3438720703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EAELKLRLK_	ENSG00000168502|ENST00000695636|MTCL1;MTCL1|p.G1084Vfs*116|1|0.23|ENSG00000168502|chr18:8798144-8798144|G/-|frameshift_variant;MTCL1|p.G604Afs*38|1|0.5|ENSG00000168502|chr18:8783840-8783840|G/-|frameshift_variant;MTCL1|p.L1858Wfs*5|1|0.26|ENSG00000168502|chr18:8826125-8826125|C/-|frameshift_variant;MTCL1|p.L694Cfs*5|1|0.37|ENSG00000168502|chr18:8784107-8784107|C/-|frameshift_variant;MTCL1|p.P1448Afs*83|1|0.4|ENSG00000168502|chr18:8824888-8824889|-/G|frameshift_variant;MTCL1|p.P1841Lfs*22|1|0.05|ENSG00000168502|chr18:8826071-8826071|C/-|frameshift_variant;MTCL1|p.W1259Efs*14|1|0.09|ENSG00000168502|chr18:8813191-8813192|-/GAGCC|frameshift_variant;nc|ENSG00000168502|Q9Y4B5-2|MTCL1;nc|ENSG00000168502|Q9Y4B5-3|MTCL1;nc|ENSG00000168502|Q9Y4B5|MTCL1	27.882242232435846	0.3367954786602879	3				NaN	NaN	0	NaN	7607	5437	13044
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13060	38.765	NaN	4862.8	30	0	355.96	0.149			+	50126	WHYYKFRPRWN	11	86	826.9131799150815	1651.811806896963	2	826.9143676757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WHYYKFRPRWN_	REV__ENSG00000124067|ENST00000316341|SLC12A4;REV__nc|ENSG00000124067|Q9UP95-2|SLC12A4;REV__nc|ENSG00000124067|Q9UP95-3|SLC12A4;REV__nc|ENSG00000124067|Q9UP95-4|SLC12A4;REV__nc|ENSG00000124067|Q9UP95-5|SLC12A4;REV__nc|ENSG00000124067|Q9UP95-6|SLC12A4;REV__nc|ENSG00000124067|Q9UP95-7|SLC12A4	5.921104790170933	0.8427637746914891	3				NaN	NaN	0	NaN	7612	5446	13059
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13068	38.785	NaN	1510	30	0	241.82	0.143	+			36873	SIGDIKDIK	9	45	494.78692597156726	NaN	0	494.7873229980469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIGDIKDIK_	EBLN2|p.A106Qfs*6|1|0.12|ENSG00000255423|chr3:73062391-73062391|A/-|frameshift_variant;ENSG00000255423|ENST00000533473|EBLN2	47.657333605630114	0.2228375344433429	3				NaN	NaN	0	NaN	7617	5449	13067
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13094	38.889	NaN	1457.9	30	0	226.19	0.214			+	6762	CEFMEIHKP	9	42	567.2601928710938	NaN	0	567.2601928710938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CEFMEIHKP_	REV__ENST00000343702.8_1_12:96052724-96052781:-|nuORF	27.882242232435846	0.3367954786602879	3				NaN	NaN	0	NaN	7625	5467	13093
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13095	38.892	NaN	3242.4	30	0	367.33	0.04			+	20229	KELRKKSYEIA	11	62	682.8963012695312	NaN	0	682.8963012695312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KELRKKSYEIA_	REV__tr|U7SMA5|U7SMA5_FUSNURibosomalRNAsmallsubunitmethyltransferaseHOS=FusobacteriumnucleatumCTI-5OX=1316586GN=rsmHPE=3SV=1	32.75053402867276	0.4194607570143992	3				NaN	NaN	0	NaN	7626	5467	13093
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13114	38.96	NaN	1772.8	30	0	345.28	0.145				-1	VPPSQIQAPPM	11	47	590.8030979575408	1179.5916429818815	2	591.3025512695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_VPPSQIQAPPM(Oxidation (M))_	ENSG00000084463|ENST00000261167|WBP11	23.52269567125451	0.7430573033454468	3				NaN	NaN	0	NaN	7633	5479	13113
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13159	39.107	NaN	2652.2	30	0	287.72	0.145			+	50575	YCFECQYPRV	10	51	654.282189071463	1306.549825209726	2	654.7844848632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YCFECQYPRV_	REV__ENSG00000184828|ENST00000590800|ZBTB7C	20.94693142431847	0.7087701759873708	3				NaN	NaN	0	NaN	7654	5503	13158
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13167	39.14	NaN	5480.9	30	0	298.77	0.149			+	50127	WHYYKFRPRWN	11	89	826.9131799150815	1651.811806896963	2	826.9118041992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WHYYKFRPRWN_	REV__ENSG00000124067|ENST00000316341|SLC12A4;REV__nc|ENSG00000124067|Q9UP95-2|SLC12A4;REV__nc|ENSG00000124067|Q9UP95-3|SLC12A4;REV__nc|ENSG00000124067|Q9UP95-4|SLC12A4;REV__nc|ENSG00000124067|Q9UP95-5|SLC12A4;REV__nc|ENSG00000124067|Q9UP95-6|SLC12A4;REV__nc|ENSG00000124067|Q9UP95-7|SLC12A4	9.705651100619752	0.8250432705525658	3				NaN	NaN	0	NaN	7656	5509	13166
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13172	39.156	NaN	963.04	30	0	95.309	0.214	+			26379	LTDLRYKV	8	45	336.53462652665917	1006.5820501801775	3	336.53399658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LTDLRYKV_	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42|TTN;TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;TTN|p.I24998Nfs*2|1|0.35|ENSG00000155657|chr2:178566216-178566217|-/T|frameshift_variant;TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;TTN|p.K26626Nfs*34|1|0.34|ENSG00000155657|chr2:178561331-178561331|T/-|frameshift_variant;TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant;TTN|p.P22810Hfs*10|1|0.03|ENSG00000155657|chr2:178572780-178572781|-/AAAT|frameshift_variant;TTN|p.V27442Cfs*4|1|0.05|ENSG00000155657|chr2:178558107-178558108|-/A|frameshift_variant	26.79610172149135	0.7524337208463756	3				NaN	NaN	0	NaN	7658	5512	13171
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13173	39.16	NaN	2671.7	30	0	507.29	0.036	+			49944	VYVQNVVKL	9	53	531.3216646795089	1060.6287764258177	2	531.3223876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYVQNVVKL_	AP3D1|p.A531T|1|0.3|ENSG00000065000|chr19:2118723-2118723|C/T|missense_variant;ENSG00000065000|ENST00000643116|AP3D1;nc|ENSG00000065000|O14617-2|AP3D1;nc|ENSG00000065000|O14617-3|AP3D1;nc|ENSG00000065000|O14617-4|AP3D1;nc|ENSG00000065000|O14617|AP3D1	63.30626980617807	0.18605348971131092	3				NaN	NaN	0	NaN	7659	5512	13171
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13186	39.196	NaN	4644	30	0	246.48	0.149	+			51254	YQRWREERFRQ	11	87	827.4201049804688	NaN	0	827.4201049804688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YQRWREERFRQ_	ENSG00000184840|ENST00000332598|TMED9;ENST00000507723.1_1_5:177021070-177022414:+|nuORF;ENST00000513799.5_1_5:177019550-177022414:+|nuORF	2.3454780930455223	0.456735970842152	3				NaN	NaN	0	NaN	7666	5518	13185
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13192	39.214	NaN	3013	30	0	333.27	0.144	+			45616	TYQDIQNTI	9	47	548.2698796331658	1094.5252063331316	2	548.269775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TYQDIQNTI_	ENSG00000181222|ENST00000674977|POLR2A;nc|ENSG00000181222|P24928|POLR2A	56.43379154798735	0.2433427591689151	3				NaN	NaN	0	NaN	7669	5521	13191
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13201	39.247	NaN	1949.1	30	0	245.38	0.214	+			30701	QDCKSLADPGS	11	53	560.7505878552593	NaN	0	560.750244140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QDCKSLADPGS_	ENSG00000129292|ENST00000395386|PHF20L1;ENST00000477051.1_1_8:133854703-133858165:+|nuORF;PHF20L1|p.E981Gfs*15|1|0.18|ENSG00000129292|chr8:132845806-132845807|-/G|frameshift_variant	47.95952297671804	0.32997419910078585	3				NaN	NaN	0	NaN	7672	5527	13200
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13202	39.25	NaN	3432.8	30	0	329.19	0.04	+			25638	LQRLKLKCIFC	11	70	682.9003295898438	NaN	0	682.9003295898438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LQRLKLKCIFC_	ENSG00000107077|ENST00000381309|KDM4C;nc|ENSG00000293552|Q9H3R0-2|KDM4C	26.69291269510374	0.4464570093767436	3				NaN	NaN	0	NaN	7673	5527	13200
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13230	39.35	NaN	2129.2	30	0	396.82	0.145	+			46923	VIWKDHHLHI	10	45	649.3641252297155	NaN	0	649.3646850585938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VIWKDHHLHI_	OR5H1|p.P53H|1|0.43|ENSG00000231192|chr3:98132855-98132855|C/A|missense_variant	16.71738777980365	0.4201028297492154	3				NaN	NaN	0	NaN	7683	5545	13229
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13266	39.476	NaN	5503.5	30	0	367.35	0.149			+	-1	FKWVCKQCRRW	11	97	827.4157136898908	NaN	0	827.4163208007812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_FKWVC(Carbamidomethyl (C))KQC(Carbamidomethyl (C))RRW_	REV__ENSG00000162975|ENST00000295082|KCNF1	9.705651100619752	0.456735970842152	3				NaN	NaN	0	NaN	7698	5566	13265
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13276	39.512	NaN	747.57	30	0	82.625	0.143	+			44693	TTILYRLQ	8	33	336.5342963258474	NaN	0	336.5341796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTILYRLQ_	ENSG00000120805|ENST00000261636|ARL1;ENST00000549302.1_1_12:101799535-101801423:-|nuORF;nc|ENSG00000120805|P40616-2|ARL1	25.450171626174864	1.7418937515398478	3				NaN	NaN	0	NaN	7702	5572	13275
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13280	39.528	NaN	2783.7	30	0	269.69	0.143	+			45664	TYVSGTLRF	9	55	522.279430045071	1042.5443071569418	2	522.2794799804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TYVSGTLRF_	ENSG00000134255|ENST00000357172|CEPT1	62.107414245175825	0.1960472003779324	3				NaN	NaN	0	NaN	7703	5575	13279
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13291	39.564	NaN	2307.2	30	0	287.93	0.145	+			39662	STIFYYVQK	9	49	574.8033560576096	1147.592159182019	2	574.8031616210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STIFYYVQK_	ENSG00000092148|ENST00000399332|HECTD1;HECTD1|p.F2271Lfs*13|1|0.16|ENSG00000092148|chr14:31107059-31107059|A/-|frameshift_variant;HECTD1|p.I2041Lfs*27|1|0.36|ENSG00000092148|chr14:31113133-31113133|T/-|frameshift_variant	34.172542307311794	0.4838870758800184	3				NaN	NaN	0	NaN	7708	5581	13290
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13302	39.599	NaN	5493.8	30	0	596.43	0.145			+	20015	KEILEEKYKGK	11	61	682.8960428153839	NaN	0	682.8978881835938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEILEEKYKGK_	REV__ENSG00000037241|ENST00000265100|RPL26L1;REV__ENST00000415623.1_1_10:70184604-70184751:+|nuORF;REV__ENST00000602923.1_1_11:2356544-2356979:-|nuORF	27.047317107675042	0.44487757903053116	3				NaN	NaN	0	NaN	7713	5587	13301
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13313	39.626	NaN	1446.4	30	0	201.94	0.144	+			39802	STLDIVLANK	10	48	537.3144776146282	1072.6144022960564	2	537.314697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STLDIVLANK_	ENSG00000167325|ENST00000300738|RRM1	53.59686742100583	0.4240759338601513	3				NaN	NaN	0	NaN	7721	5590	13312
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13327	39.666	NaN	4863.3	30	0	435.36	0.147				-1	HRYKFCDNKWM	11	61	772.3521728515625	NaN	0	772.3521728515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_HRYKFCDNKWM(Oxidation (M))_	ENSG00000121075|ENST00000644296|TBX4;nc|ENSG00000121075|P57082|TBX4;TBX4|p.P371Lfs*8|2|0.28|ENSG00000121075|chr17:61482984-61482984|C/-|frameshift_variant	17.468008924990375	0.456735970842152	3				NaN	NaN	0	NaN	7729	5596	13326
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13350	39.751	NaN	5070.1	30	0	364.72	0.15			+	-1	FKWVCKQCRRW	11	84	827.4157136898908	NaN	0	827.4158935546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_FKWVC(Carbamidomethyl (C))KQC(Carbamidomethyl (C))RRW_	REV__ENSG00000162975|ENST00000295082|KCNF1	19.1035232394073	0.456735970842152	3				NaN	NaN	0	NaN	7737	5611	13349
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13360	39.784	NaN	2240	30	0	459.09	0.145	+			13395	GLEEQARQAM	10	53	574.772340556398	1147.530128179596	2	575.2736206054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_GLEEQARQAM(Oxidation (M))_	ENSG00000102984|ENST00000425432|ZNF821	47.657333605630114	0.47858658696240314	3				NaN	NaN	0	NaN	7741	5617	13359
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13369	39.817	NaN	4904.8	30	0	586.15	0.15				-1	RMRECTRCRRR	11	82	826.9139133496526	NaN	0	826.9148559570312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C),Oxidation (M)	_RM(Oxidation (M))REC(Carbamidomethyl (C))TRC(Carbamidomethyl (C))RRR_	ENST00000238823.12_1_2:33824301-33824382:-|nuORF	5.220141733780809	0.456735970842152	3				NaN	NaN	0	NaN	7744	5623	13368
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13399	39.937	NaN	2133.2	30	0	478.12	0.144	+			49933	VYVKDLSSF	9	59	529.2827092610843	1056.5508655889685	2	529.7850341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYVKDLSSF_	ENSG00000101350|ENST00000375712|KIF3B;KIF3B-TOX2|1|fusion;KIF3B-TOX2|2|fusion	44.377184641726394	0.36891676396732553	3				NaN	NaN	0	NaN	7753	5644	13398
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13403	39.953	NaN	5679	30	0	601.69	0.211			+	13324	GKLLISPWHKW	11	76	682.8957022527617	1363.7768515723233	2	682.896728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GKLLISPWHKW_	REV__ENSG00000149743|ENST00000317459|TRPT1;REV__ENST00000539436.5_1_11:63991868-63992452:-|nuORF;REV__ENST00000541928.1_1_11:63991649-63992138:-|nuORF;REV__nc|ENSG00000149743|Q86TN4-2|TRPT1;REV__nc|ENSG00000149743|Q86TN4-3|TRPT1;REV__nc|ENSG00000149743|Q86TN4-4|TRPT1	22.579656572578934	0.7529490144093228	3				NaN	NaN	0	NaN	7754	5647	13402
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13404	39.956	NaN	975.12	30	0	105.88	0.035			+	1721	AGYEKLKKA	9	49	336.5340572038662	NaN	0	336.53466796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AGYEKLKKA_	REV__ENSG00000162373|ENST00000371833|BEND5;REV__nc|ENSG00000162373|Q7L4P6-2|BEND5	19.359975847455235	0.3714571876404798	3				NaN	NaN	0	NaN	7755	5647	13402
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13462	40.181	NaN	5375.6	30	0	399.19	0.211			+	-1	RKMEWWKKMWQ	11	94	826.9128656888521	1651.811178444504	2	826.9144287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_RKMEWWKKM(Oxidation (M))WQ_	REV__ENSG00000130234|ENST00000252519|ACE2;REV__nc|ENSG00000130234|Q9BYF1-3|ACE2	2.524325990644308	0.8767434653369689	3				NaN	NaN	0	NaN	7774	5686	13461
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13463	40.185	NaN	1389.5	30	0	214.66	0.03				-1	 	0	46	198.18515014648438	NaN	0	198.18515014648438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7775	5686	13461
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13498	40.299	NaN	4445.1	30	0	446.02	0.145	+			33806	RQPLHLHSLHK	11	74	683.3982654855567	NaN	0	683.40087890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RQPLHLHSLHK_	ENSG00000130055|ENST00000374382|GDPD2;ENST00000472623.1_1_X:69645679-69647005:+|nuORF;GDPD2|p.M234Cfs*8|2|0.19|ENSG00000130055|chrX:70427004-70427004|C/-|frameshift_variant;nc|ENSG00000130055|Q9HCC8-2|GDPD2;nc|ENSG00000130055|Q9HCC8-3|GDPD2	32.75053402867276	0.4194607570143992	3				NaN	NaN	0	NaN	7792	5704	13497
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13503	40.315	NaN	1642.3	30	0	776.51	0.143	+			36762	SHLSSTSSLA	10	32	495.24797904340926	988.4814051536185	2	495.2474365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SHLSSTSSLA_	ECT2|p.R877H|1|0.33|ENSG00000114346|chr3:172816812-172816812|G/A|missense_variant	16.006774744331256	0.7351120747673535	3				NaN	NaN	0	NaN	7794	5707	13502
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13557	40.523	NaN	4309.8	30	0	301.64	0.149			+	-1	RYRKWFIYCFN	11	88	826.9128656888521	1651.811178444504	2	826.9146118164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_RYRKWFIYC(Carbamidomethyl (C))FN_	REV__ENSG00000249715|ENST00000624922|FER1L5;REV__nc|ENSG00000249715|A0AVI2-2|FER1L5;REV__nc|ENSG00000249715|A0AVI2-4|FER1L5	5.55782384252955	0.84446477687463	3				NaN	NaN	0	NaN	7812	5743	13556
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13562	40.539	NaN	955.91	30	0	108.53	0.143				-1	ASMKKVKSL	9	46	336.53494447858714	NaN	0	336.53472900390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ASM(Oxidation (M))KKVKSL_	ENST00000369426.9_1_1:119575536-119588262:-|nuORF	20.94693142431847	0.3660861156085067	3				NaN	NaN	0	NaN	7814	5746	13561
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13591	40.645	NaN	4420.7	30	0	379.58	0.145			+	-1	WITLVVILVYM	11	75	683.3982654855567	NaN	0	683.3998413085938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_WITLVVILVYM(Oxidation (M))_	REV__ENSG00000105711|ENST00000262631|SCN1B;REV__ENST00000602150.2_2_19:35530007-35530163:+|nuORF	35.61828744233558	0.4066803947888518	3				NaN	NaN	0	NaN	7825	5764	13590
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13641	40.926	NaN	4454.6	30	0	354.16	0.149				-1	NFCYIFWKRYR	11	86	826.9128656888521	1651.811178444504	2	826.9139404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_NFC(Carbamidomethyl (C))YIFWKRYR_	ENSG00000249715|ENST00000624922|FER1L5;nc|ENSG00000249715|A0AVI2-2|FER1L5;nc|ENSG00000249715|A0AVI2-4|FER1L5	5.55782384252955	0.84446477687463	3				NaN	NaN	0	NaN	7842	5797	13640
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13660	40.986	NaN	3833.9	30	0	370.06	0.211			+	-1	QRPLVMINKHI	11	72	682.8957022527617	1363.7768515723233	2	683.397216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_QRPLVM(Oxidation (M))INKHI_	REV__ENSG00000164100|ENST00000296499|NDST3;REV__nc|ENSG00000164100|O95803-3|NDST3;REV__NDST3|p.G492Vfs*27|1|0.37|ENSG00000164100|chr4:118143616-118143616|G/-|frameshift_variant;REV__NDST3|p.P761Hfs*5|1|0.26|ENSG00000164100|chr4:118240682-118240682|C/-|frameshift_variant	37.81151784470057	0.5878881669006212	3				NaN	NaN	0	NaN	7852	5806	13659
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13661	40.989	NaN	2045.9	30	0	196.49	0.035	+			15477	GVAFIFNQK	9	42	512.2848710112697	1022.5551890893395	2	512.2855224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GVAFIFNQK_	ENSG00000133816|ENST00000683283|MICAL2;ENSG00000243156|ENST00000441493|MICAL3;ENST00000530691.5_1_11:12229562-12281716:+|nuORF;MICAL2|p.E821Kfs*48|1|0.07|ENSG00000133816|chr11:12242336-12242337|AG/-|frameshift_variant;MICAL3|p.A1313Lfs*17|1|0.24|ENSG00000243156|chr22:17818727-17818727|G/-|frameshift_variant;MICAL3|p.R1499Gfs*106|7|0.44|ENSG00000243156|chr22:17818166-17818166|G/-|frameshift_variant;MICAL3|p.R1706Afs*24|1|0.3|ENSG00000243156|chr22:17817545-17817545|G/-|frameshift_variant;nc|ENSG00000133816|O94851-2|MICAL2;nc|ENSG00000133816|O94851-3|MICAL2;nc|ENSG00000133816|O94851-4|MICAL2;nc|ENSG00000133816|O94851-5|MICAL2;nc|ENSG00000133816|O94851-6|MICAL2;nc|ENSG00000133816|O94851|MICAL2;nc|ENSG00000243156|Q7RTP6-2|MICAL3;nc|ENSG00000243156|Q7RTP6-3|MICAL3;nc|ENSG00000243156|Q7RTP6-4|MICAL3;nc|ENSG00000243156|Q7RTP6-5|MICAL3	73.97473282117947	0.12360187025703594	3				NaN	NaN	0	NaN	7853	5806	13659
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13703	41.182	NaN	735.73	30	0	75.451	0.143	+			25057	LLKVHVDPS	9	36	336.53460106121577	NaN	0	336.5343017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LLKVHVDPS_	ENSG00000075702|ENST00000401500|WDR62;ENST00000587391.5_1_19:36573967-36592308:+|nuORF;nc|ENSG00000075702|O43379|WDR62	18.324413293986947	0.3749620627292244	3				NaN	NaN	0	NaN	7859	5842	13702
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13721	41.263	NaN	4596.7	30	0	291.16	0.211			+	-1	FKWVCKQCRRW	11	91	827.415180365627	NaN	0	827.4116821289062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_FKWVC(Carbamidomethyl (C))KQC(Carbamidomethyl (C))RRW_	REV__ENSG00000162975|ENST00000295082|KCNF1	2.718429308559148	0.456735970842152	3				NaN	NaN	0	NaN	7862	5857	13720
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13722	41.267	NaN	1224.7	30	0	139.59	0.036	+			42278	TADHNLLLY	9	37	530.2772850572364	NaN	0	530.27685546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TADHNLLLY_	ENSG00000183751|ENST00000568546|TBL3	29.14955571784316	0.3303970763161698	3				NaN	NaN	0	NaN	7863	5857	13720
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13727	41.282	NaN	5076.4	30	0	552.21	0.145			+	-1	SSCPKGMKYPS	11	51	600.7735783856139	1199.5326038380276	2	600.7734985351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_SSCPKGM(Oxidation (M))KYPS_	REV__ENSG00000101074|ENST00000217043|R3HDML	20.83715455343099	0.7712264395190968	3				NaN	NaN	0	NaN	7865	5860	13726
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13737	41.307	NaN	1161.1	30	0	147.46	0.143	+			28395	NENSLFKSL	9	47	526.2746083219016	1050.5346637106031	2	526.274169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NENSLFKSL_	CLTC|p.A1374*|1|0.05|ENSG00000141367|chr17:59683464-59683465|-/TA|frameshift_variant;ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000141367|Q00610-2|CLTC	61.691277971877994	0.19951612995419254	3				NaN	NaN	0	NaN	7872	5863	13736
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13743	41.325	NaN	3753.7	30	0	465.52	0.145				-1	 	0	74	682.8957022527617	1363.7768515723233	2	682.89599609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7875	5866	13742
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13750	41.357	NaN	1584.1	30	0	460.48	0.144			+	25675	LRFGKRSIN	9	34	364.2219543457031	NaN	0	364.2219543457031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LRFGKRSIN_	REV__ENSG00000147650|ENST00000276654|LRP12;REV__LRP12|p.C451Afs*37|2|0.28|ENSG00000147650|chr8:104497201-104497201|A/-|frameshift_variant;REV__nc|ENSG00000147650|Q9Y561-2|LRP12	17.364965105453717	0.37820932774828947	3				NaN	NaN	0	NaN	7876	5872	13749
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13797	41.565	NaN	1705.3	30	0	180.76	0.145	+			6880	CLLGWLGAEL	10	43	566.2987628689689	1130.5829728047377	2	566.2979125976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_C(Carbamidomethyl (C))LLGWLGAEL_	L1PA6_dup546|chr2:49227587-49231532:-|4.547726375381561|0.2927699401366612|3.96|483.0|204|2|anti-sense	55.50420428727701	0.4067289358710215	3				NaN	NaN	0	NaN	7887	5908	13796
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13818	41.664	NaN	3216	30	0	382.2	0.145			+	-1	PGKCKKKRYVT	11	55	682.8957022527617	1363.7768515723233	2	682.89697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_PGKC(Carbamidomethyl (C))KKKRYVT_	REV__ENST00000565271.1_1_17:74668237-74668399:+|nuORF	25.57405402267927	0.7215402271931856	3				NaN	NaN	0	NaN	7890	5926	13817
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13870	41.913	NaN	770.31	30	0	74.645	0.143				-1	AMLKSSKVK	9	36	336.5339432875937	NaN	0	336.5343933105469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_AM(Oxidation (M))LKSSKVK_	ENST00000498106.1_1_7:30088860-30089055:+|nuORF	20.94693142431847	0.3660861156085067	3				NaN	NaN	0	NaN	7897	5971	13869
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13903	42.06	NaN	5629.2	30	0	767.55	0.145				-1	LLIEWFYLIL	10	73	682.8949674901851	1363.77538204717	2	683.3976440429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LLIEWFYLIL_	ENST00000468349.1_1_21:34962215-34963578:-|nuORF	18.324413293986947	0.7233354337501514	3				NaN	NaN	0	NaN	7903	5998	13902
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13963	42.338	NaN	875.5	30	0	97.99	0.143			+	1846	AIKITYNKG	9	43	336.5342634003576	NaN	0	336.53436279296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AIKITYNKG_	REV__ENSG00000162733|ENST00000367921|DDR2	19.359975847455235	0.3714571876404798	3				NaN	NaN	0	NaN	7912	6049	13962
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13974	42.386	NaN	3322.8	30	0	399.76	0.144	+			14800	GTLDYILQR	9	56	539.7985106680197	1077.5824684028394	2	539.7984619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTLDYILQR_	ENSG00000140718|ENST00000471389|FTO	87.69643885390035	0.07135982304947239	3				NaN	NaN	0	NaN	7914	6058	13973
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13983	42.42	NaN	4014.3	30	0	262.98	0.149				-1	MRRCRRCARWP	11	69	823.9043579101562	NaN	0	823.9043579101562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term),2 Carbamidomethyl (C)	_(Acetyl (Protein N-term))MRRC(Carbamidomethyl (C))RRC(Carbamidomethyl (C))ARWP_	nc|ENSG00000214851|Q8N6U2|LINC00612	5.55782384252955	0.456735970842152	3				NaN	NaN	0	NaN	7917	6064	13982
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	13996	42.471	NaN	4334.5	30	0	298.36	0.149			+	-1	WYCLHHFQKWE	11	69	817.3729248046875	NaN	0	817.3729248046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_WYC(Carbamidomethyl (C))LHHFQKWE_	REV__ENSG00000155158|ENST00000512701|TTC39B;REV__ENST00000505732.5_1_9:15186859-15307321:-|nuORF;REV__nc|ENSG00000155158|Q5VTQ0-2|TTC39B;REV__nc|ENSG00000155158|Q5VTQ0-3|TTC39B;REV__nc|ENSG00000155158|Q5VTQ0-4|TTC39B;REV__nc|ENSG00000155158|Q5VTQ0-5|TTC39B;REV__nc|ENSG00000155158|Q5VTQ0-6|TTC39B;REV__nc|ENSG00000155158|Q5VTQ0|TTC39B	6.31265097734313	0.456735970842152	3				NaN	NaN	0	NaN	7921	6073	13995
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14005	42.505	NaN	1267	30	0	313.8	0.141			+	511	ACLCPHIS	8	43	422.19453156765695	842.3745102021139	2	422.6923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ACLCPHIS_	REV__ENST00000573130.2_1_16:3104061-3104997:-|nuORF;REV__ENST00000573130.2_1_16:3104061-3104997:-|nuORF;REV__ENST00000573130.2_1_16:3104061-3104997:-|nuORF;REV__ENST00000573130.2_1_16:3104061-3104997:-|nuORF	29.841539824830324	0.7289191502596711	3				NaN	NaN	0	NaN	7924	6079	14004
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14037	42.638	NaN	2159.2	30	0	472.11	0.141	+			21631	KPSADPDN	8	38	422.19453156765695	842.3745102021139	2	422.1955261230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KPSADPDN_	PCDHGA4|p.D717N|1|0.33|ENSG00000262576|chr5:141357256-141357256|G/A|missense_variant	31.954861631926434	0.7126016770032289	3				NaN	NaN	0	NaN	7932	6103	14036
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14061	42.752	NaN	868.35	30	0	64.582	0.143				-1	ASMKKVKSL	9	41	336.53414210393635	NaN	0	336.533935546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ASM(Oxidation (M))KKVKSL_	ENST00000369426.9_1_1:119575536-119588262:-|nuORF	26.69291269510374	0.34280015626154364	3				NaN	NaN	0	NaN	7935	6124	14060
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14099	42.917	NaN	3168.9	30	0	375.74	0.142	+			5969	AVLLVFANK	9	50	487.8056617415357	973.5967705498714	2	487.804931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVLLVFANK_	ENSG00000004059|ENST00000000233|ARF5;ENSG00000134287|ENST00000256682|ARF3;ENSG00000143761|ENST00000272102|ARF1;ENST00000406466.2_1_7:94463564-94463681:+|nuORF;ENST00000444561.2_1_17:43710417-43713807:+|nuORF;ENST00000463733.5_1_7:127230086-127231350:+|nuORF;ENST00000470670.5_1_1:228284963-228285711:+|nuORF;nc|ENSG00000134287|P61204-2|ARF3	45.97224482568171	0.3502073465782774	3				NaN	NaN	0	NaN	7943	6154	14098
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14126	43.032	NaN	1224.7	30	0	260.92	0.141			+	18233	INPDAGQE	8	28	422.19453156765695	842.3745102021139	2	422.19573974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_INPDAGQE_	REV__ENSG00000272031|ENST00000606888|ANKRD34A	17.364965105453717	0.7956685240855921	3				NaN	NaN	0	NaN	7949	6175	14125
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14133	43.064	NaN	3903.2	30	0	283	0.147				-1	CRRRRRLLIHP	11	70	766.9634399414062	NaN	0	766.9634399414062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_C(Carbamidomethyl (C))RRRRRLLIHP_	ENST00000295065.9_1_2:32235333-32235450:-|nuORF	10.265252068803164	0.456735970842152	3				NaN	NaN	0	NaN	7950	6181	14132
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14187	43.33	NaN	1834.4	30	0	397.11	0.144	+			47954	VSMLNVYLK	9	52	533.8019868914943	1065.5894208497884	2	533.8027954101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSMLNVYLK_	ENSG00000111775|ENST00000229379|COX6A1;ENST00000550009.1_1_12:120875908-120876378:+|nuORF	82.7504851949679	0.08565546331141553	3				NaN	NaN	0	NaN	7953	6232	14186
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14202	43.393	NaN	1976.6	30	0	175.71	0.138				-1	 	0	62	338.1937771173691	674.3730013015382	2	338.6955261230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7956	6244	14201
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14218	43.474	NaN	1111.4	30	0	162.8	0.144	+			18293	IPNPVDLWL	9	33	533.8018798828125	NaN	0	533.8018798828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IPNPVDLWL_	PKDREJ|p.R1173W|1|0.35|ENSG00000130943|chr22:46259806-46259806|G/A|missense_variant	19.996771675451527	0.3693019437812985	3				NaN	NaN	0	NaN	7957	6259	14217
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14292	43.818	NaN	85383	30	0	10124	0.138				-1	LVEIPTKM	8	121	316.1804504394531	NaN	0	316.1804504394531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LVEIPTKM(Oxidation (M))_	ENSG00000108370|ENST00000262406|RGS9;ENST00000581175.5_1_17:63133658-63206777:+|nuORF;nc|ENSG00000108370|O75916-2|RGS9;nc|ENSG00000108370|O75916-3|RGS9;nc|ENSG00000108370|O75916-4|RGS9;nc|ENSG00000108370|O75916-5|RGS9	24.20275056022122	1.7418937515398478	3				NaN	NaN	0	NaN	7968	6322	14291
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14312	43.9	NaN	706.22	30	0	86.748	0.139	+			18305	IPRILALKQ	9	28	351.237704421116	NaN	0	351.2376708984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IPRILALKQ_	ENSG00000169902|ENST00000304842|TPST1;TPST1|p.F162Lfs*3|1|0.44|ENSG00000169902|chr7:66240908-66240908|T/-|frameshift_variant	5.55782384252955	0.4072763090772754	3				NaN	NaN	0	NaN	7973	6337	14311
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14360	44.142	NaN	2359.6	30	0	265.64	0.143	+			19709	KDSTLIMQL	9	42	524.7889609898616	1047.5633690465231	2	524.7896728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KDSTLIMQL_	ENSG00000108953|ENST00000264335|YWHAE;ENSG00000128245|ENST00000248975|YWHAH;ENSG00000134308|ENST00000238081|YWHAQ;ENSG00000164924|ENST00000395958|YWHAZ;ENSG00000166913|ENST00000353703|YWHAB;ENSG00000170027|ENST00000307630|YWHAG;ENSG00000175793|ENST00000339276|SFN;ENST00000397492.1_1_22:32346295-32352776:+|nuORF;ENST00000399764.3_1_9:34922183-34922564:-|nuORF;ENST00000479421.5_2_20:43531717-43535076:+|nuORF;ENST00000480304.5_1_8:101936173-101961117:-|nuORF;nc|ENSG00000108953|P62258-2|YWHAE;nc|ENSG00000164924|P63104-2|YWHAZ;nc|ENSG00000166913|P31946-2|YWHAB;nc|ENSG00000175793|P31947-2|SFN	60.11826168202944	0.21262886028301267	3				NaN	NaN	0	NaN	7976	6382	14359
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14377	44.221	NaN	3617	30	0	526.53	0.143	+			4613	ATLLIFANK	9	54	495.803317072738	989.5920812122761	2	495.80267333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATLLIFANK_	ENSG00000213465|ENST00000246747|ARL2	66.42927471994793	0.16001998865088202	3				NaN	NaN	0	NaN	7978	6397	14376
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14480	44.724	NaN	1437.5	30	0	130.17	0.138				-1	 	0	45	338.19375808576115	674.3729632383223	2	338.1935729980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7985	6493	14479
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14554	45.084	NaN	4007.8	30	0	352.44	0.138				-1	 	0	67	338.1937843740499	674.3730158148999	2	338.1934509277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7990	6562	14553
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14600	45.303	NaN	2585.4	30	0	432.65	0.214				-1	 	0	63	241.1357637059324	NaN	0	241.13580322265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7994	6604	14599
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14601	45.307	NaN	9844.8	30	0	5609.9	0.106				-1	 	0	58	285.16243488533297	568.310316837466	2	285.1619873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7995	6604	14599
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14602	45.309	NaN	1465.4	30	0	273.71	0.028	+			29580	PFLGVPSA	8	63	263.14898279362967	NaN	0	263.14923095703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PFLGVPSA_	ENSG00000187634|ENST00000616016|SAMD11;ENST00000466827.1_1_1:877519-877869:+|nuORF;nc|ENSG00000187634|Q96NU1-1|SAMD11;nc|ENSG00000187634|Q96NU1-2|SAMD11;nc|ENSG00000187634|Q96NU1-4|SAMD11;nc|ENSG00000187634|Q96NU1-5|SAMD11;nc|ENSG00000187634|Q96NU1-6|SAMD11;nc|ENSG00000187634|Q96NU1|SAMD11	11.511019455917149	1.7418937515398478	3				NaN	NaN	0	NaN	7996	6604	14599
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14629	45.433	NaN	27556	30	0	3839.7	0.214				-1	 	0	93	338.1937843740499	674.3730158148999	2	338.1934509277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	7999	6628	14628
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14630	45.436	NaN	1190.7	30	0	272.19	0.036	+			32909	RDVAKHRLV	9	26	547.3325988552093	NaN	0	547.3330078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RDVAKHRLV_	ENSG00000113248|ENST00000231173|PCDHB15	18.324413293986947	0.3749620627292244	3				NaN	NaN	0	NaN	8000	6628	14628
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14650	45.528	NaN	4344.3	30	0	534.2	0.145				-1	 	0	66	675.3790497720441	674.3717733054441	1	675.38037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	8002	6646	14649
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14702	45.768	NaN	1342.7	30	0	116.69	0.138				-1	 	0	47	338.1937843740499	674.3730158148999	2	338.1934509277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	8009	6691	14701
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14712	45.816	NaN	3942.9	30	0	415.85	0.145			+	29222	NVVSWKKPRRN	11	61	692.4056337659958	NaN	0	692.4054565429688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NVVSWKKPRRN_	REV__nc|ENSG00000267908|P0CG00|ZSCAN5DP	19.1035232394073	0.456735970842152	3				NaN	NaN	0	NaN	8010	6700	14711
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14721	45.848	NaN	1089.8	30	0	143.2	0.141			+	30474	QAEIPATI	8	34	421.73516845703125	NaN	0	421.73516845703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QAEIPATI_	REV__ENSG00000003756|ENST00000347869|RBM5;REV__ENST00000464988.1_1_3:50154644-50155886:+|nuORF	12.959181472943097	1.7418937515398478	3				NaN	NaN	0	NaN	8013	6706	14720
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14741	45.943	NaN	2903.1	30	0	300.79	0.145				-1	 	0	52	635.3843160038817	634.3770395372817	1	635.3843994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	8015	6724	14740
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14797	46.224	NaN	4090.3	30	0	367.76	0.14				-1	 	0	53	382.2201571756561	762.4257614181122	2	382.2196960449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	8017	6778	14796
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14888	46.675	NaN	20203	30	0	1989.4	0.139				-1	 	0	83	360.2069623790394	718.3993718248788	2	360.2067565917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	8021	6865	14887
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14935	46.897	NaN	29609	30	0	3431	0.214				-1	 	0	75	340.2094432334325	678.4043335336651	2	340.2090759277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	8026	6907	14934
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14936	46.901	NaN	713.06	30	0	321.76	0.037	+			29784	PIKLKLIFI	9	24	362.253488786599	NaN	0	362.253662109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PIKLKLIFI_	nc|ENSG00000128918|O94788-3|ALDH1A2	5.55782384252955	0.4072763090772754	3				NaN	NaN	0	NaN	8027	6907	14934
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	14944	46.932	NaN	1970.1	30	0	285.93	0.136				-1	 	0	76	243.15144160626514	NaN	0	243.15158081054688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	8029	6913	14943
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15056	47.494	NaN	2743	30	0	214.96	0.14			+	33883	RRPAPPGG	8	62	404.2331434858459	806.4517340384918	2	404.23248291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RRPAPPGG_	REV__ENSG00000272333|ENST00000420124|KMT2B;REV__KMT2B|p.A2538Pfs*76|1|0.42|ENSG00000272333|chr19:35737693-35737693|G/-|frameshift_variant;REV__KMT2B|p.D1589Gfs*89|1|0.28|ENSG00000272333|chr19:35729058-35729059|-/G|frameshift_variant;REV__KMT2B|p.G1199Afs*156|1|0.16|ENSG00000272333|chr19:35725283-35725283|G/-|frameshift_variant;REV__KMT2B|p.G1879Vfs*16|5|0.4|ENSG00000272333|chr19:35732101-35732101|G/-|frameshift_variant;REV__KMT2B|p.G2123Vfs*30|1|0.34|ENSG00000272333|chr19:35732913-35732913|G/-|frameshift_variant;REV__KMT2B|p.L2136Pfs*17|1|0.27|ENSG00000272333|chr19:35732956-35732956|T/-|frameshift_variant;REV__KMT2B|p.P1201Rfs*154|1|0.37|ENSG00000272333|chr19:35725288-35725288|C/-|frameshift_variant;REV__KMT2B|p.P1821Hfs*74|1|0.36|ENSG00000272333|chr19:35731927-35731927|C/-|frameshift_variant;REV__KMT2B|p.R1911Dfs*23|1|0.18|ENSG00000272333|chr19:35732274-35732274|C/-|frameshift_variant;REV__KMT2B|p.S1095L|1|0.14|ENSG00000272333|chr19:35723957-35723957|C/T|missense_variant	21.70233525837049	0.7917639344264583	3				NaN	NaN	0	NaN	8033	7021	15055
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15154	47.978	NaN	6249.1	30	0	558.84	0.14				-1	 	0	73	382.2200895371795	762.425626141159	2	382.2198486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	8038	7114	15153
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15176	48.072	NaN	3927.7	30	0	346.78	0.147			+	-1	RLRMRQRRHAK	11	63	762.4505004882812	NaN	0	762.4505004882812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_RLRM(Oxidation (M))RQRRHAK_	REV__nc|ENSG00000105732|Q6ZN55-2|ZNF574	5.55782384252955	0.456735970842152	3				NaN	NaN	0	NaN	8042	7132	15175
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15180	48.088	NaN	3067.3	30	0	538.01	0.154				-1	 	0	48	617.1105011827105	NaN	0	617.1113891601562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	8043	7135	15179
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15199	48.182	NaN	1869.8	30	0	178.26	0.139				-1	 	0	44	362.2225515214667	722.4305501097334	2	362.2223205566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	8044	7153	15198
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15285	48.607	NaN	976.04	30	0	103.36	0.139				-1	 	0	37	362.2225515214667	722.4305501097334	2	362.2223205566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	8049	7234	15284
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15295	48.654	NaN	1881.4	30	0	156.3	0.141			+	33837	RRAPPPSA	8	53	426.24613751867724	850.4777221041545	2	426.2456359863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RRAPPPSA_	REV__ENSG00000106948|ENST00000374088|AKNA;REV__nc|ENSG00000106948|Q7Z591-2|AKNA;REV__nc|ENSG00000106948|Q7Z591-4|AKNA;REV__nc|ENSG00000106948|Q7Z591-5|AKNA;REV__nc|ENSG00000106948|Q7Z591-7|AKNA;REV__nc|ENSG00000106948|Q7Z591-8|AKNA	13.775330524044264	0.789990904165365	3				NaN	NaN	0	NaN	8050	7243	15294
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15400	49.169	NaN	3312.3	30	0	227.08	0.14			+	30023	PPPRARGG	8	66	404.23319705306716	806.4518411729343	2	404.2326354980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PPPRARGG_	REV__ENST00000497866.5_1_1:44444922-44446927:+|nuORF	20.481830146152948	0.8005983782650069	3				NaN	NaN	0	NaN	8056	7342	15399
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15414	49.233	NaN	5628.1	30	0	728.36	0.146				-1	REEEDDDDCP	10	65	640.2220383694865	1278.429523805773	2	640.2230834960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_REEEDDDDC(Carbamidomethyl (C))P_	CCDC117|p.E77D|1|0.36|ENSG00000159873|chr22:28773770-28773770|G/T|missense_variant	19.996771675451527	0.7148376616046445	3				NaN	NaN	0	NaN	8058	7354	15413
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15418	49.249	NaN	7402.1	30	0	462.06	0.211				-1	 	0	92	784.6431884765625	NaN	0	784.6431884765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	8059	7357	15417
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15419	49.252	NaN	5727.3	30	0	480.27	0.04				-1	RCNCCCCPCC	10	68	668.1869506835938	NaN	0	668.1869506835938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	4 Carbamidomethyl (C)	_RC(Carbamidomethyl (C))NC(Carbamidomethyl (C))C(Carbamidomethyl (C))CC(Carbamidomethyl (C))PCC_	ENSG00000163746|ENST00000696113|PLSCR2;nc|ENSG00000163746|Q9NRY7-3|PLSCR2;nc|ENSG00000163746|Q9NRY7|PLSCR2	6.735540347417125	0.42010282974921537	3				NaN	NaN	0	NaN	8060	7357	15417
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15423	49.266	NaN	10018	30	0	810.16	0.211				-1	SVHCCCCCFW	10	78	681.2224601794079	NaN	0	681.2219848632812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	3 Carbamidomethyl (C)	_SVHC(Carbamidomethyl (C))C(Carbamidomethyl (C))CCC(Carbamidomethyl (C))FW_	ENST00000316660.6_1_18:57570359-57570470:+|nuORF	12.206847966760668	0.4201028297492154	3				NaN	NaN	0	NaN	8061	7360	15422
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15424	49.27	NaN	7688.6	30	0	355.36	0.106				-1	 	0	91	823.5929565429688	NaN	0	823.5929565429688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	8062	7360	15422
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15425	49.272	NaN	7880.9	30	0	677.26	0.042				-1	 	0	83	740.6351928710938	NaN	0	740.6351928710938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	8063	7360	15422
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15429	49.285	NaN	6789.5	30	0	681.37	0.212			+	7358	DDDENWGPCNV	11	79	632.232762925366	1262.450972917532	2	632.2335815429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DDDENWGPCNV_	REV__SBF2|p.R1075C|1|0.36|ENSG00000133812|chr11:9842658-9842658|G/A|missense_variant	18.262085536374414	0.7849791996189919	3				NaN	NaN	0	NaN	8064	7363	15428
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15430	49.289	NaN	7611.9	30	0	634.28	0.039				-1	VRCCCQMCC	9	70	646.711293022438	NaN	0	646.7119140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	4 Carbamidomethyl (C),Oxidation (M)	_VRC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))QM(Oxidation (M))C(Carbamidomethyl (C))C_	ENSG00000166448|ENST00000339375|TMEM130;nc|ENSG00000166448|Q8N3G9-3|TMEM130;nc|ENSG00000166448|Q8N3G9|TMEM130	31.954861631926434	0.3162336699109506	3				NaN	NaN	0	NaN	8065	7363	15428
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15434	49.303	NaN	7867.5	30	0	518.3	0.213			+	-1	CHDASFYQDV	10	68	621.2482838394349	1240.4820147456696	2	621.2496948242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_C(Carbamidomethyl (C))HDASFYQDV_	REV__ZNF318|p.R638Q|1|0.32|ENSG00000171467|chr6:43355421-43355421|C/T|missense_variant	32.81241826257853	0.6118718159329168	3				NaN	NaN	0	NaN	8066	7366	15433
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15435	49.307	NaN	6983.3	30	0	686.38	0.106			+	-1	MTQCTEGTCFE	11	75	633.2287099120417	1264.4428668908834	2	633.2308959960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_M(Oxidation (M))TQCTEGTCFE_	REV__ENSG00000182208|ENST00000329957|MOB2;REV__nc|ENSG00000182208|Q70IA6-2|MOB2;REV__nc|ENSG00000182208|Q70IA6|MOB2	19.1035232394073	0.7810393085260824	3				NaN	NaN	0	NaN	8067	7366	15433
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15436	49.309	NaN	7806.7	30	0	447.31	0.106				-1	CCESSCCCPCC	11	77	713.1804809570312	NaN	0	713.1804809570312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	5 Carbamidomethyl (C)	_C(Carbamidomethyl (C))C(Carbamidomethyl (C))ESSC(Carbamidomethyl (C))CCPC(Carbamidomethyl (C))C(Carbamidomethyl (C))_	ENSG00000241241|ENST00000440582|KRTAP4-16	3.159230865173134	0.456735970842152	3				NaN	NaN	0	NaN	8068	7366	15433
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15437	49.31	NaN	3850.2	30	0	463.23	0.106				-1	SCKKCCCSCC	10	66	648.2089469567196	NaN	0	648.2081909179688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	4 Carbamidomethyl (C)	_SC(Carbamidomethyl (C))KKC(Carbamidomethyl (C))C(Carbamidomethyl (C))CSC(Carbamidomethyl (C))C_	ENSG00000169688|ENST00000334346|MT1B	14.137123925751023	0.4201028297492154	3				NaN	NaN	0	NaN	8069	7366	15433
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15438	49.312	NaN	1135.6	30	0	147.65	0.106			+	51561	YYGDECEC	8	29	491.1515417034672	NaN	0	491.15167236328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YYGDECEC_	REV__ENSG00000135333|ENST00000369303|EPHA7;REV__nc|ENSG00000135333|Q15375-2|EPHA7;REV__nc|ENSG00000135333|Q15375-4|EPHA7;REV__nc|ENSG00000135333|Q15375-5|EPHA7	8.231297230196988	1.7418937515398478	3				NaN	NaN	0	NaN	8070	7366	15433
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15439	49.314	NaN	9272.8	30	0	724.07	0.106			+	-1	HCSECEGMEQD	11	71	691.2243041992188	NaN	0	691.2243041992188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Carbamidomethyl (C)	_HC(Carbamidomethyl (C))SEC(Carbamidomethyl (C))EGMEQD_	REV__ENSG00000099139|ENST00000674117|PCSK5;REV__nc|ENSG00000099139|Q92824|PCSK5	16.71738777980365	0.456735970842152	3				NaN	NaN	0	NaN	8071	7366	15433
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15440	49.316	NaN	8556.7	30	0	1146.5	0.039				-1	CCETTCCMTT	10	82	662.2105712890625	NaN	0	662.2105712890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	4 Carbamidomethyl (C)	_C(Carbamidomethyl (C))C(Carbamidomethyl (C))ETTC(Carbamidomethyl (C))C(Carbamidomethyl (C))MTT_	KRTAP9-3|p.R141M|1|0.29|ENSG00000204873|chr17:41232923-41232923|G/T|missense_variant	15.641811463095205	0.4201028297492154	3				NaN	NaN	0	NaN	8072	7366	15433
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15445	49.33	NaN	9253	30	0	587.64	0.146			+	-1	YCCSCCCCCPW	11	83	722.68994140625	NaN	0	722.68994140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	3 Carbamidomethyl (C)	_YCCSC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))CCPW_	REV__CSF1R|p.S493Vfs*119|1|0.25|ENSG00000182578|chr5:150069907-150069907|C/-|frameshift_variant	15.641811463095205	0.456735970842152	3				NaN	NaN	0	NaN	8074	7369	15444
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15449	49.346	NaN	5661.3	30	0	527.7	0.213			+	-1	RCICCAGSCL	10	62	621.2482838394349	1240.4820147456696	2	621.248291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term),3 Carbamidomethyl (C)	_(Acetyl (Protein N-term))RC(Carbamidomethyl (C))IC(Carbamidomethyl (C))C(Carbamidomethyl (C))AGSCL_	REV__CYP2U1|p.F337Lfs*34|1|0.44|ENSG00000155016|chr4:107945487-107945487|T/-|frameshift_variant	15.641811463095205	0.7369665665077569	3				NaN	NaN	0	NaN	8075	7372	15448
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15450	49.35	NaN	6100.9	30	0	643.79	0.039				-1	WMPCCCTDR	9	77	643.2318397728382	NaN	0	643.229736328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	3 Carbamidomethyl (C)	_WMPC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))TDR_	ENST00000375199.7_1_1:19570195-19571411:-|nuORF	24.20275056022122	0.35506675290109213	3				NaN	NaN	0	NaN	8076	7372	15448
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15454	49.364	NaN	8782.5	30	0	479	0.211				-1	 	0	93	812.6469116210938	NaN	0	812.6469116210938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	8077	7375	15453
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15455	49.367	NaN	8807.9	30	0	917.68	0.106				-1	EERDCCNDCY	10	77	653.7088579938467	1305.4031630544932	2	654.211669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_EERDC(Carbamidomethyl (C))CNDCY_	ENSG00000108510|ENST00000397786|MED13	15.641811463095205	0.7369665665077569	3				NaN	NaN	0	NaN	8078	7375	15453
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15456	49.369	NaN	5260.4	30	0	477.14	0.106				-1	DFFLNCCDCC	10	70	648.710693359375	NaN	0	648.710693359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_DFFLNC(Carbamidomethyl (C))CDC(Carbamidomethyl (C))C_	ENSG00000182447|ENST00000327928|OTOL1;OTOL1|p.Q142Kfs*48|1|0.08|ENSG00000182447|chr3:161499227-161499227|C/-|frameshift_variant	14.864876125193954	0.4201028297492154	3				NaN	NaN	0	NaN	8079	7375	15453
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15457	49.371	NaN	7904.1	30	0	435.11	0.043				-1	 	0	94	779.1494140625	NaN	0	779.1494140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	8080	7375	15453
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15462	49.385	NaN	5635.5	30	0	492.49	0.145			+	-1	CGCCCGHHRC	10	81	653.7088579938467	1305.4031630544932	2	653.7091064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	4 Carbamidomethyl (C)	_C(Carbamidomethyl (C))GC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))GHHRC_	REV__ENSG00000204930|ENST00000423537|FAM221B;REV__nc|ENSG00000204930|A6H8Z2-2|FAM221B	11.511019455917149	0.7579564031639042	3				NaN	NaN	0	NaN	8082	7378	15461
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15466	49.401	NaN	7368	30	0	617.03	0.146				-1	CCESSCCCPCC	11	79	713.1780395507812	NaN	0	713.1780395507812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	5 Carbamidomethyl (C)	_C(Carbamidomethyl (C))C(Carbamidomethyl (C))ESSC(Carbamidomethyl (C))CCPC(Carbamidomethyl (C))C(Carbamidomethyl (C))_	ENSG00000241241|ENST00000440582|KRTAP4-16	14.864876125193954	0.456735970842152	3				NaN	NaN	0	NaN	8083	7381	15465
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15473	49.433	NaN	841.56	30	0	121.42	0.142	+			28691	NMNDDDGW	8	34	483.66422069987067	NaN	0	483.6635437011719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NMNDDDGW_	ENST00000545710.1_1_12:9659830-9660388:-|nuORF	12.959181472943097	1.7418937515398478	3				NaN	NaN	0	NaN	8084	7387	15472
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15478	49.449	NaN	6823.3	30	0	509.18	0.212				-1	SCCQPCCHPTC	11	68	648.2089469567196	NaN	0	648.2075805664062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_SC(Carbamidomethyl (C))CQPCCHPTC(Carbamidomethyl (C))_	ENSG00000180386|ENST00000391354|KRTAP9-7;ENSG00000204873|ENST00000411528|KRTAP9-3;ENSG00000240542|ENST00000398470|KRTAP9-1;ENSG00000240542|ENST00000398470|KRTAP9-1;ENSG00000240542|ENST00000398470|KRTAP9-1	8.693696342081763	0.456735970842152	3				NaN	NaN	0	NaN	8086	7390	15477
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15479	49.453	NaN	4859.5	30	0	627.64	0.106				-1	WWTGCSCGCSC	11	64	653.7088579938467	1305.4031630544932	2	653.208251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_WWTGCSC(Carbamidomethyl (C))GC(Carbamidomethyl (C))SC_	nc|ENSG00000117971|P30926-2|CHRNB4	9.705651100619752	0.8250432705525658	3				NaN	NaN	0	NaN	8087	7390	15477
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15480	49.454	NaN	8959.5	30	0	417.1	0.106				-1	 	0	91	793.1309204101562	NaN	0	793.1309204101562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	8088	7390	15477
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15481	49.456	NaN	7438	30	0	716.57	0.106				-1	GGGCSRCCCCC	11	73	668.6915283203125	NaN	0	668.6915283203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	5 Carbamidomethyl (C)	_GGGC(Carbamidomethyl (C))SRC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))C_	ENSG00000206579|ENST00000327381|XKR4	8.693696342081763	0.456735970842152	3				NaN	NaN	0	NaN	8089	7390	15477
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15482	49.458	NaN	7589.7	30	0	603.25	0.041				-1	 	0	73	708.1795043945312	NaN	0	708.1795043945312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	8090	7390	15477
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15486	49.472	NaN	24462	30	0	2877	0.214				-1	 	0	77	384.2357117491518	766.4568705651036	2	384.2353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	8091	7393	15485
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15487	49.476	NaN	4942.6	30	0	450.56	0.039				-1	WHCTMFCGCC	10	63	652.7125244140625	NaN	0	652.7125244140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_WHC(Carbamidomethyl (C))TMFCGC(Carbamidomethyl (C))C_	WDR87|p.K2720Rfs*57|5|0.35|ENSG00000171804|chr19:37885395-37885395|T/-|frameshift_variant	11.511019455917149	0.4201028297492154	3				NaN	NaN	0	NaN	8092	7393	15485
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15492	49.49	NaN	7889.9	30	0	551.2	0.145				-1	 	0	68	648.0858742543282	NaN	0	647.7042236328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	8094	7396	15491
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15500	49.523	NaN	1194.6	30	0	97.836	0.214			+	33738	RPPARPGG	8	36	404.23319705306716	806.4518411729343	2	404.2322692871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RPPARPGG_	REV__ENST00000164227.9_1_19:45252055-45254595:+|nuORF	14.664097394203935	0.7913966407026132	3				NaN	NaN	0	NaN	8096	7402	15499
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15501	49.526	NaN	4516.9	30	0	372.19	0.04			+	-1	QCCCEECCNQ	10	65	667.1904907226562	NaN	0	667.1904907226562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	3 Carbamidomethyl (C)	_QC(Carbamidomethyl (C))C(Carbamidomethyl (C))CEEC(Carbamidomethyl (C))CNQ_	REV__ENSG00000186860|ENST00000334202|KRTAP17-1	2.92943323627438	0.4201028297492154	3				NaN	NaN	0	NaN	8097	7402	15499
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15515	49.578	NaN	6473.5	30	0	820.88	0.145				-1	GECLCGQCVCH	11	80	633.2287099120417	1264.4428668908834	2	633.229248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_GEC(Carbamidomethyl (C))LCGQCVC(Carbamidomethyl (C))H_	ENSG00000259207|ENST00000559488|ITGB3;ITGB3|p.G649Efs*20|1|0.3|ENSG00000259207|chr17:47300507-47300507|G/-|frameshift_variant;nc|ENSG00000259207|P05106-2|ITGB3;nc|ENSG00000259207|P05106-3|ITGB3	13.45404412870281	0.8074920481021843	3				NaN	NaN	0	NaN	8102	7411	15514
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15527	49.627	NaN	1390.5	30	0	121.01	0.138				-1	 	0	50	198.18536376953125	NaN	0	198.18536376953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	8105	7420	15526
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15564	49.804	NaN	80107	30	0	71483	0.214				-1	 	0	77	223.06362915039062	NaN	0	223.06362915039062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	8109	7453	15563
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15565	49.807	NaN	759.6	30	0	92.864	0.03				-1	 	0	44	331.00211407997534	NaN	0	331.0020446777344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	8110	7453	15563
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15603	49.998	NaN	843.71	30	0	96.139	0.139	+			47392	VPLASRLLLC	10	38	362.22202699601235	NaN	0	362.2221374511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VPLASRLLLC_	ENST00000359867.7_2_22:38687065-38687464:-|nuORF	17.468008924990375	0.4201028297492154	3				NaN	NaN	0	NaN	8112	7489	15602
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15663	50.304	NaN	2550.5	30	0	166.53	0.141			+	43556	THRKGVPG	8	55	426.246165091102	850.477777249004	2	426.24554443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_THRKGVPG_	REV__CDH23|p.F3223Lfs*43|1|0.34|ENSG00000107736|chr10:71812773-71812773|T/-|frameshift_variant;REV__ENSG00000107736|ENST00000224721|CDH23;REV__nc|ENSG00000107736|Q9H251-2|CDH23;REV__nc|ENSG00000107736|Q9H251-3|CDH23;REV__nc|ENSG00000107736|Q9H251-4|CDH23;REV__nc|ENSG00000107736|Q9H251-6|CDH23;REV__nc|ENSG00000107736|Q9H251-8|CDH23	13.775330524044264	0.789990904165365	3				NaN	NaN	0	NaN	8115	7546	15662
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15710	50.539	NaN	2372.1	30	0	339.9	0.14				-1	 	0	49	406.2488000513636	810.4830471695273	2	406.2483825683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	8117	7591	15709
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15720	50.586	NaN	837.62	30	0	127.08	0.142	+			21709	KQILSRAN	8	32	465.27978515625	NaN	0	465.27978515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KQILSRAN_	ENSG00000138640|ENST00000264344|FAM13A;ENST00000508360.5_1_4:89653076-89671014:-|nuORF;ENST00000511573.5_1_4:89649686-89680064:-|nuORF;nc|ENSG00000138640|O94988-1|FAM13A;nc|ENSG00000138640|O94988-3|FAM13A;nc|ENSG00000138640|O94988-5|FAM13A;nc|ENSG00000138640|O94988-6|FAM13A	18.324413293986947	1.7418937515398478	3				NaN	NaN	0	NaN	8118	7600	15719
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15734	50.649	NaN	795.43	30	0	85.339	0.139				-1	 	0	38	362.7247009277344	NaN	0	362.7247009277344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	8120	7612	15733
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15766	50.805	NaN	1525.3	30	0	251.43	0.142			+	13688	GPKPVRQTG	9	46	470.27223007990295	938.5299072266059	2	470.27178955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GPKPVRQTG_	REV__ENSG00000169181|ENST00000447459|GSG1L;REV__nc|ENSG00000169181|Q6UXU4-3|GSG1L	25.57405402267927	0.5642445186134241	3				NaN	NaN	0	NaN	8122	7642	15765
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15783	50.883	NaN	1734.2	30	0	163.94	0.14				-1	 	0	46	406.2488000513636	810.4830471695273	2	406.24859619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	8124	7657	15782
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15947	51.696	NaN	1862.6	30	0	572.42	0.141	+			37993	SPKILITT	8	43	436.7754165564705	871.536280179741	2	436.7748718261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SPKILITT_	ENSG00000117133|ENST00000370654|RPF1	24.20275056022122	0.7724576178584145	3				NaN	NaN	0	NaN	8132	7813	15946
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	15955	51.728	NaN	2695.5	30	0	384.09	0.154				-1	 	0	38	617.1105011827105	NaN	0	617.110595703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	8134	7819	15954
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	16057	52.245	NaN	2267.7	30	0	413.59	0.143				-1	 	0	28	489.05487997593167	NaN	0	489.0550231933594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	8137	7918	16056
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	16061	52.261	NaN	1043.5	30	0	121.07	0.14			+	30013	PPLLLGTT	8	35	406.24845201234155	NaN	0	406.2485046386719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PPLLLGTT_	REV__ENSG00000186648|ENST00000342740|CARMIL3;REV__ENST00000559694.5_1_14:24530705-24534560:+|nuORF;REV__ENST00000560349.1_1_14:24532322-24538610:+|nuORF;REV__nc|ENSG00000186648|Q8ND23-2|CARMIL3	21.70233525837049	1.7418937515398478	3				NaN	NaN	0	NaN	8138	7921	16060
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	16068	52.293	NaN	5708.7	30	0	831.83	0.142				-1	 	0	50	311.06158447265625	NaN	0	311.06158447265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	8139	7927	16067
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	16087	52.386	NaN	1502.8	30	0	109.58	0.142			+	11964	FVLVLFCV	8	47	470.27230642932733	938.5300599254547	2	470.2717590332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FVLVLFCV_	REV__ENST00000252818.4_1_19:18390759-18390948:-|nuORF	24.504012794735996	0.7701314986472447	3				NaN	NaN	0	NaN	8140	7945	16086
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	16095	52.418	NaN	1560.8	30	0	176.37	0.143			+	13904	GRIVVKTSAS	10	42	509.3063626688158	1016.5981724044316	2	509.3069763183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GRIVVKTSAS_	REV__ENSG00000016864|ENST00000266014|GLT8D1;REV__ENST00000484163.5_1_3:52729811-52734476:-|nuORF;REV__GLT8D1|p.V247Cfs*14|1|0.37|ENSG00000016864|chr3:52695494-52695495|-/A|frameshift_variant;REV__nc|ENSG00000016864|Q68CQ7-2|GLT8D1	17.468008924990375	0.7276870902328821	3				NaN	NaN	0	NaN	8142	7951	16094
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	16131	52.591	NaN	2896.7	30	0	514.36	0.145	+			21238	KLIRQKKETV	10	36	621.8988647460938	NaN	0	621.8988647460938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KLIRQKKETV_	ADGB|p.K1379Rfs*12|1|0.29|ENSG00000118492|chr6:146784714-146784714|A/-|frameshift_variant;ENSG00000118492|ENST00000397944|ADGB	13.45404412870281	0.4201028297492154	3				NaN	NaN	0	NaN	8145	7984	16130
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	16147	52.669	NaN	19453	30	0	2671.3	0.141			+	29645	PGKNKTVR	8	82	450.2749052539745	898.535257574749	2	450.27447509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PGKNKTVR_	REV__ENST00000444527.2_1_8:56364433-56364982:-|nuORF	21.9598887501803	0.7897753010812679	3				NaN	NaN	0	NaN	8146	7999	16146
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	16225	53.061	NaN	3286.9	30	0	266.34	0.148			+	-1	RRWRQWRKMQ	10	59	773.9203491210938	NaN	0	773.9203491210938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_RRWRQWRKM(Oxidation (M))Q_	REV__ENST00000216456.6_1_14:68126581-68129225:-|nuORF	10.265252068803164	0.42010282974921537	3				NaN	NaN	0	NaN	8149	8074	16224
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	16257	53.217	NaN	1723.7	30	0	299.3	0.144	+			9413	EKIFKIVAN	9	44	531.3205628604428	1060.6265727876855	2	531.3206176757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EKIFKIVAN_	ENSG00000240720|ENST00000458448|LRRD1	31.529811441608018	0.5085848003137583	3				NaN	NaN	0	NaN	8151	8104	16256
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	16281	53.327	NaN	1760	30	0	234.08	0.143	+			47585	VRPREVDI	8	48	492.285997950594	982.557442967988	2	492.2849426269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VRPREVDI_	ENST00000559405.5_1_15:49913321-49913456:+|nuORF	25.57405402267927	0.7618694492699909	3				NaN	NaN	0	NaN	8154	8125	16280
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	16291	53.375	NaN	3197.8	30	0	563.56	0.145			+	21276	KLNYTSRARL	10	50	611.3564942179805	NaN	0	611.3562622070312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KLNYTSRARL_	REV__ENSG00000170820|ENST00000406846|FSHR;REV__FSHR|p.T555Wfs*89|1|0.07|ENSG00000170820|chr2:48963159-48963160|-/TCCAA|frameshift_variant;REV__nc|ENSG00000170820|P23945-3|FSHR;REV__nc|ENSG00000170820|P23945-4|FSHR	23.52269567125451	0.42010282974921537	3				NaN	NaN	0	NaN	8155	8134	16290
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	16322	53.53	NaN	2861.8	30	0	381.08	0.142	+			13703	GPRIKKSTG	9	50	472.2879175354269	942.5612821376538	2	472.287353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GPRIKKSTG_	ENSG00000122257|ENST00000319715|RBBP6;nc|ENSG00000122257|Q7Z6E9-2|RBBP6;nc|ENSG00000122257|Q7Z6E9-4|RBBP6;RBBP6|p.A1062Pfs*49|2|0.3|ENSG00000122257|chr16:24569868-24569868|A/-|frameshift_variant;RBBP6|p.D1432Vfs*9|1|0.04|ENSG00000122257|chr16:24571360-24571361|-/TTTTCCCTTTTTC|frameshift_variant;RBBP6|p.N1351Mfs*9|1|0.45|ENSG00000122257|chr16:24571113-24571113|A/-|frameshift_variant;RBBP6|p.R1089Qfs*6|1|0.18|ENSG00000122257|chr16:24569949-24569950|-/C|frameshift_variant;RBBP6|p.R939Efs*11|1|0.32|ENSG00000122257|chr16:24569501-24569501|A/-|frameshift_variant;RBBP6|p.T1475Lfs*20|1|0.3|ENSG00000122257|chr16:24571483-24571483|A/-|frameshift_variant	16.473147378115264	0.6112419832031293	3				NaN	NaN	0	NaN	8156	8164	16321
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	16335	53.594	NaN	2447.1	30	0	455.94	0.142	+			24970	LLAWVIVF	8	43	480.7999572753906	NaN	0	480.7999572753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LLAWVIVF_	ENSG00000011083|ENST00000230671|SLC6A7;SLC6A7|p.F324Lfs*76|1|0.37|ENSG00000011083|chr5:150202585-150202586|-/C|frameshift_variant	24.504012794735996	1.7418937515398478	3				NaN	NaN	0	NaN	8157	8176	16334
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	16426	54.045	NaN	2570.7	30	0	608.54	0.144	+			44017	TPKPTRHIR	9	47	553.3319294436789	1104.6493059541576	2	553.3303833007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TPKPTRHIR_	ENSG00000089116|ENST00000261731|LHX5;ENSG00000273706|ENST00000614239|LHX1;LHX1|p.E399Kfs*2|5|0.23|ENSG00000273706|chr17:36943098-36943098|C/-|frameshift_variant	21.9598887501803	0.5980208138527809	3				NaN	NaN	0	NaN	8161	8263	16425
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	16473	54.278	NaN	1538.4	30	0	201.33	0.143			+	33924	RRVQHFKG	8	48	514.2978962814481	NaN	0	514.2988891601562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RRVQHFKG_	REV__nc|ENSG00000176697|P23560-5|BDNF	20.481830146152948	1.741893751539848	3				NaN	NaN	0	NaN	8163	8308	16472
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	16489	54.356	NaN	1482.9	30	0	138.41	0.134				-1	 	0	53	198.18516540527344	NaN	0	198.18516540527344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	8164	8323	16488
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	16505	54.435	NaN	1481.9	30	0	193.59	0.142			+	47583	VRPLRGTD	8	46	457.26424687420933	912.5139408152187	2	457.2633972167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VRPLRGTD_	REV__ENST00000556166.2_1_15:26870621-26874195:-|nuORF	25.450171626174864	0.7628259754767981	3				NaN	NaN	0	NaN	8165	8338	16504
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	16509	54.451	NaN	4472	30	0	615.56	0.214			+	19452	KARKPVSTT	9	62	494.30145188388656	986.5883508345731	2	494.30047607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KARKPVSTT_	REV__ENSG00000138593|ENST00000559471|SECISBP2L;REV__ENST00000561203.1_1_15:49308706-49309212:-|nuORF;REV__nc|ENSG00000138593|Q93073-2|SECISBP2L	26.69291269510374	0.5537881896960711	3				NaN	NaN	0	NaN	8166	8341	16508
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	16510	54.454	NaN	3263.6	30	0	180.61	0.043				-1	HFNRYLCRPRR	11	69	787.9168701171875	NaN	0	787.9168701171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_HFNRYLC(Carbamidomethyl (C))RPRR_	ENSG00000105997|ENST00000612286|HOXA3;ENSG00000120093|ENST00000498678|HOXB3;ENSG00000128652|ENST00000683222|HOXD3;HOXA3|p.Q302Rfs*74|1|0.39|ENSG00000105997|chr7:27108343-27108343|G/-|frameshift_variant;HOXA3|p.S318Rfs*50|1|0.3|ENSG00000105997|chr7:27108269-27108293|CTGTGGGGGTGGCGGGGGTGCGCAG/-|frameshift_variant;HOXB3|p.G258Afs*19|1|0.1|ENSG00000120093|chr17:48550857-48550857|C/-|frameshift_variant;HOXB3|p.P365Lfs*64|1|0.46|ENSG00000120093|chr17:48550536-48550536|G/-|frameshift_variant;nc|ENSG00000120093|P14651-2|HOXB3;nc|ENSG00000120093|P14651-3|HOXB3	9.705651100619752	0.456735970842152	3				NaN	NaN	0	NaN	8167	8341	16508
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	16538	54.592	NaN	3726.9	30	0	265.42	0.149	+			8044	DTYYYRRRHRH	11	66	811.9088745117188	NaN	0	811.9088745117188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DTYYYRRRHRH_	ENSG00000170464|ENST00000302060|DNAJC18;ENST00000507405.5_1_5:138755893-138773164:-|nuORF	9.705651100619752	0.456735970842152	3				NaN	NaN	0	NaN	8168	8368	16537
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	16569	54.747	NaN	2638.8	30	0	354.79	0.145			+	20221	KELIYVVKAS	10	44	575.346144954534	1148.677736975868	2	575.3463134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KELIYVVKAS_	REV__DIS3L2|p.I516Ffs*15|1|0.43|ENSG00000144535|chr2:232263321-232263321|C/-|frameshift_variant;REV__DIS3L2|p.L768Pfs*56|1|0.27|ENSG00000144535|chr2:232334638-232334639|-/C|frameshift_variant;REV__DIS3L2|p.P612Rfs*33|1|0.4|ENSG00000144535|chr2:232329903-232329903|C/-|frameshift_variant;REV__ENSG00000144535|ENST00000325385|DIS3L2;REV__nc|ENSG00000144535|Q8IYB7-2|DIS3L2;REV__nc|ENSG00000144535|Q8IYB7-3|DIS3L2	14.137123925751023	0.7446123510383054	3				NaN	NaN	0	NaN	8169	8398	16568
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	16585	54.825	NaN	4166.6	30	0	278.61	0.148				-1	RKQRRMCRRDP	11	74	787.91617328348	NaN	0	787.9163208007812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_RKQRRM(Oxidation (M))C(Carbamidomethyl (C))RRDP_	ENSG00000143816|ENST00000272164|WNT9A;WNT9A|p.G167Afs*38|2|0.38|ENSG00000143816|chr1:227924253-227924253|C/-|frameshift_variant	10.586796910825942	0.456735970842152	3				NaN	NaN	0	NaN	8170	8413	16584
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	16673	55.274	NaN	3204.1	30	0	277.16	0.143			+	38680	SSISRQLLK	9	61	516.3140827020295	1030.613612470859	2	516.3143920898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSISRQLLK_	REV__ENSG00000164808|ENST00000297423|SPIDR;REV__ENST00000518711.1_1_8:48641465-48642165:+|nuORF;REV__nc|ENSG00000164808|Q14159-2|SPIDR	18.262085536374414	0.6112419832031293	3				NaN	NaN	0	NaN	8171	8500	16672
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	16689	55.352	NaN	2598.1	30	0	384.78	0.142			+	-1	LLLAGCPTL	9	47	479.2768428856575	NaN	0	479.2768249511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_LLLAGC(Carbamidomethyl (C))PTL_	REV__ENSG00000174326|ENST00000574600|SLC16A11;REV__nc|ENSG00000174326|Q8NCK7|SLC16A11;REV__SLC16A11|p.P224Qfs*8|1|0.23|ENSG00000174326|chr17:7042511-7042511|G/-|frameshift_variant	31.954861631926434	0.3162336699109506	3				NaN	NaN	0	NaN	8172	8515	16688
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	16693	55.368	NaN	2788.9	30	0	171.53	0.149			+	-1	RWPMWCLKWFL	11	69	811.9085693359375	NaN	0	811.9085693359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_RWPMWC(Carbamidomethyl (C))LKWFL_	REV__ENSG00000134207|ENST00000610222|SYT6	9.182911543092327	0.456735970842152	3				NaN	NaN	0	NaN	8173	8518	16692
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	16802	56.017	NaN	4094.8	30	0	481.46	0.144			+	26626	LVAIKRSSTT	10	62	538.3272653903277	1074.6399778474554	2	538.32666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LVAIKRSSTT_	REV__ENST00000554272.5_1_12:25215794-25219317:+|nuORF	19.1035232394073	0.7193765342308498	3				NaN	NaN	0	NaN	8174	8626	16801
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	16854	56.281	NaN	124950	30	0	51609	0.137				-1	 	0	64	281.0516662597656	NaN	0	281.0516662597656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	8175	8677	16853
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	16954	56.794	NaN	3399.8	30	0	447.44	0.144	+			32771	RARGHSLPLL	10	54	560.3404192596718	1118.6662855861434	2	560.339599609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RARGHSLPLL_	ENST00000487852.1_1_13:33590814-33628082:+|nuORF	19.996771675451527	0.7148376616046445	3				NaN	NaN	0	NaN	8176	8776	16953
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	16967	56.856	NaN	964.1	30	0	85.641	0.135				-1	 	0	50	198.18516540527344	NaN	0	198.18516540527344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	3				NaN	NaN	0	NaN	8177	8788	16966
200727_Lumos_FAIMS_CID_IT_CVSet2_1ul_172T	16992	56.981	NaN	3076	30	0	325.96	0.143			+	50908	YGGPAGLVLKA	11	62	523.3037109375	NaN	0	523.3037109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YGGPAGLVLKA_	REV__ENST00000589645.5_1_17:42461260-42462716:-|nuORF	23.04248740728303	0.456735970842152	3				NaN	NaN	0	NaN	8178	8812	16991
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2039	10.582	NaN	272.35	30	0	52.695	0.144	+			14763	GTKSLRLLNP	10	16	549.835693359375	NaN	0	549.835693359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTKSLRLLNP_	ENSG00000079931|ENST00000367963|MOXD1;nc|ENSG00000079931|Q6UVY6-2|MOXD1	9.705651100619752	0.4201028297492154	4				NaN	NaN	0	NaN	33	2004	2038
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2067	10.662	NaN	2632.4	30	0	730.2	0.142	+			19220	KAAGGATPKK	10	50	464.78259362894073	927.5506343246815	2	464.78271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAAGGATPKK_	ENSG00000187837|ENST00000343677|H1-2	114.85826248499774	0.03459167991829056	4				NaN	NaN	0	NaN	49	2016	2066
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2074	10.681	NaN	578.47	30	0	276.78	0.143				-1	HTCTRQGR	8	19	508.24456787109375	NaN	0	508.24456787109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_HTC(Carbamidomethyl (C))TRQGR_	ENSG00000198089|ENST00000400288|SFI1;ENST00000382162.7_1_22:31904270-32000328:+|nuORF;ENST00000465646.5_1_22:31904270-31924850:+|nuORF;nc|ENSG00000198089|A8K8P3-2|SFI1;nc|ENSG00000198089|A8K8P3-5|SFI1;nc|ENSG00000198089|A8K8P3-9|SFI1	17.364965105453717	1.7418937515398478	4				NaN	NaN	0	NaN	53	2019	2073
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2089	10.805	NaN	40.235	30	0	18.346	0.147			+	929	AEIKRKCRQK	10	3	420.58233642578125	NaN	0	420.58233642578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEIKRKCRQK_	REV__ENSG00000078674|ENST00000325083|PCM1;REV__nc|ENSG00000078674|Q15154-2|PCM1;REV__nc|ENSG00000078674|Q15154-4|PCM1;REV__nc|ENSG00000078674|Q15154-5|PCM1;REV__PCM1|p.N1992Tfs*15|1|0.25|ENSG00000078674|chr8:18025580-18025580|A/-|frameshift_variant	4.612557629759915	0.4201028297492154	4				NaN	NaN	0	NaN	65	2022	2088
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2100	10.83	NaN	828.43	30	0	132.84	0.144				-1	ASCRVKRVT	9	32	359.5374755859375	NaN	0	359.5374755859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_ASC(Carbamidomethyl (C))RVKRVT_	ENSG00000197063|ENST00000357736|MAFG	22.579656572578934	0.3605601358598771	4				NaN	NaN	0	NaN	73	2025	2099
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2138	10.949	NaN	1759.1	30	0	695.37	0.14	+			19219	KAAGGATPK	9	37	400.73492754803397	799.455302162868	2	400.73492431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAAGGATPK_	ENSG00000187837|ENST00000343677|H1-2	82.7504851949679	0.08565546331141553	4				NaN	NaN	0	NaN	93	2043	2137
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2162	11.014	NaN	1392.1	30	0	363.83	0.142	+			19488	KATGAATPKK	10	45	486.79565659673887	971.5767602602778	2	486.7958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KATGAATPKK_	ENSG00000168298|ENST00000304218|H1-4	89.02883481214508	0.13663399911061233	4				NaN	NaN	0	NaN	108	2052	2161
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2192	11.088	NaN	2082.2	30	0	474.61	0.215	+			19413	KAPKSPAKAK	10	44	513.327027962404	1024.639502991608	2	513.326904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAPKSPAKAK_	ENSG00000168298|ENST00000304218|H1-4	136.5150327860613	0.011683253857074924	4				NaN	NaN	0	NaN	129	2061	2191
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2193	11.092	NaN	3633	30	0	1457.8	0.034	+			5183	ATTKSTVNK	9	49	475.2692529259473	948.5239529186946	2	475.7705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATTKSTVNK_	ENSG00000114742|ENST00000302313|WDR48;nc|ENSG00000114742|Q8TAF3-3|WDR48;nc|ENSG00000114742|Q8TAF3-4|WDR48;nc|ENSG00000114742|Q8TAF3-5|WDR48	80.45461616416974	0.09558281504443908	4				NaN	NaN	0	NaN	130	2061	2191
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2209	11.125	NaN	2397.3	30	0	793.74	0.142			+	21956	KSAVNKVVA	9	41	458.2848144959569	914.5550760587138	2	458.2845458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSAVNKVVA_	REV__AP3B1|p.E758Dfs*25|1|0.05|ENSG00000132842|chr5:78110330-78110331|-/GTTGTAATTGAAGGTAAATA|frameshift_variant;REV__AP3B1|p.K923Nfs*4|5|0.24|ENSG00000132842|chr5:78039083-78039083|T/-|frameshift_variant;REV__AP3B1|p.S141Kfs*3|1|0.56|ENSG00000132842|chr5:78227486-78227487|-/T|frameshift_variant;REV__ENSG00000132842|ENST00000255194|AP3B1;REV__nc|ENSG00000132842|O00203-3|AP3B1	47.657333605630114	0.33044192980041115	4				NaN	NaN	0	NaN	143	2064	2208
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2224	11.157	NaN	13442	30	0	4980.9	0.142	+			4513	ATKKPAPEK	9	68	485.2899189569594	968.5652849807188	2	485.2903137207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATKKPAPEK_	ENSG00000174444|ENST00000307961|RPL4;ENST00000422486.1_1_3:185135285-185135612:-|nuORF;ENST00000567229.5_1_15:66791747-66793486:-|nuORF	131.61620852596164	0.014413238321579053	4				NaN	NaN	0	NaN	155	2067	2223
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2240	11.192	NaN	37424	30	0	11253	0.144	+			40143	STQKGQIKK	9	71	339.8729519251262	1016.5970263755786	3	339.873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STQKGQIKK_	ENSG00000171241|ENST00000303383|SHCBP1	67.49366992349736	0.1516260258713357	4				NaN	NaN	0	NaN	168	2070	2239
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2287	11.315	NaN	3967.5	30	0	1373.3	0.142	+			19213	KAAGAGKVTK	10	58	465.789926170338	929.565299407476	2	465.7901916503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAAGAGKVTK_	ENSG00000156508|ENST00000309268|EEF1A1;ENST00000359165.5_1_12:19609181-19609565:-|nuORF;ENST00000436459.2_1_9:135895553-135896258:+|nuORF;ENST00000447052.1_1_21:24762753-24763314:+|nuORF;ENST00000547505.2_1_12:44054544-44054901:+|nuORF;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	131.61620852596164	0.01298938390812184	4				NaN	NaN	0	NaN	200	2085	2286
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2295	11.335	NaN	1175.1	30	0	165.94	0.143	+			7191	DAHKSEVAH	9	50	497.24080542244724	992.4670579116945	2	497.2412414550781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DAHKSEVAH_	ALB|p.V457Wfs*25|1|0.2|ENSG00000163631|chr4:73417606-73417606|A/-|frameshift_variant;CON__P02768-1;ENSG00000163631|ENST00000295897|ALB;nc|ENSG00000163631|P02768-2|ALB;nc|ENSG00000163631|P02768-3|ALB	104.0567914643314	0.03506238181059741	4				NaN	NaN	0	NaN	205	2088	2294
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2322	11.397	NaN	1845.8	30	0	636.66	0.143			+	47150	VLRKLEGPK	9	40	520.3349471574182	1038.6553413816364	2	520.8367309570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VLRKLEGPK_	REV__ENSG00000204599|ENST00000396551|TRIM39;REV__nc|ENSG00000204599|Q9HCM9|TRIM39	44.377184641726394	0.36891676396732553	4				NaN	NaN	0	NaN	226	2094	2321
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2335	11.426	NaN	8329	30	0	3489.6	0.143	+			41454	SVNNKVSKK	9	44	335.20097872537724	1002.5811067763318	3	335.2013854980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVNNKVSKK_	ENSG00000188938|ENST00000375412|FAM120AOS	44.377184641726394	0.36891676396732553	4				NaN	NaN	0	NaN	236	2097	2334
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2352	11.462	NaN	4572.6	30	0	1447.3	0.214	+			34466	RVADKASEK	9	52	502.2808837890625	NaN	0	502.2808837890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVADKASEK_	ENSG00000205978|ENST00000382554|NYNRIN	128.60217544463768	0.0008034130035139065	4				NaN	NaN	0	NaN	250	2100	2351
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2353	11.466	NaN	623.69	30	0	384.96	0.106	+			34017	RSKHQVLQ	8	20	498.2915954589844	NaN	0	498.2915954589844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RSKHQVLQ_	ENST00000420836.2_1_12:68429646-68429838:+|nuORF	16.473147378115264	1.7418937515398478	4				NaN	NaN	0	NaN	251	2100	2351
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2354	11.468	NaN	134.95	30	0	32.276	0.036	+			19338	KAKKNANKPL	10	9	556.3516845703125	NaN	0	556.3516845703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KAKKNANKPL_	ENSG00000182827|ENST00000366812|ACBD3	10.586796910825942	0.4201028297492154	4				NaN	NaN	0	NaN	252	2100	2351
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2372	11.505	NaN	7130.5	30	0	2626.2	0.144	+			22899	KVMKDAKTK	9	60	350.21112060546875	NaN	0	350.21112060546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVMKDAKTK_	ENSG00000198900|ENST00000361337|TOP1	95.81516180277367	0.029873745472008544	4				NaN	NaN	0	NaN	267	2103	2371
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2389	11.542	NaN	21152	30	0	4396.7	0.142	+			21862	KRLETVAL	8	76	465.2922658697112	NaN	0	465.2924499511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KRLETVAL_	ENSG00000127603|ENST00000564288|MACF1;MACF1|p.A5223Lfs*8|1|0.21|ENSG00000127603|chr1:39388486-39388486|G/-|frameshift_variant;MACF1|p.N4824Kfs*19|1|0.33|ENSG00000127603|chr1:39387292-39387293|-/A|frameshift_variant;MACF1|p.T4896Lfs*29|1|0.27|ENSG00000127603|chr1:39387507-39387507|A/-|frameshift_variant;nc|ENSG00000127603|Q9UPN3-2|MACF1;nc|ENSG00000127603|Q9UPN3-3|MACF1;nc|ENSG00000127603|Q9UPN3-4|MACF1;nc|ENSG00000127603|Q9UPN3-5|MACF1;nc|ENSG00000127603|Q9UPN3|MACF1	106.41520541750704	1.7418937515398478	4				NaN	NaN	0	NaN	281	2106	2388
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2405	11.576	NaN	1529	30	0	778.8	0.143	+			37490	SLKRSSPRT	9	21	516.3014917387899	1030.5884305443797	2	516.3020629882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLKRSSPRT_	ENSG00000159166|ENST00000391967|LAD1	14.137123925751023	0.6112419832031292	4				NaN	NaN	0	NaN	294	2109	2404
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2437	11.647	NaN	887.92	30	0	160.29	0.214	+			421	AATKKPAPEK	10	37	520.8088989257812	NaN	0	520.8088989257812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AATKKPAPEK_	ENSG00000174444|ENST00000307961|RPL4;ENST00000422486.1_1_3:185135285-185135612:-|nuORF;ENST00000567229.5_1_15:66791747-66793486:-|nuORF	53.08895987439943	0.2860736266326207	4				NaN	NaN	0	NaN	320	2115	2436
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2438	11.65	NaN	3300.5	30	0	872.45	0.106	+			19243	KAAVTPGKK	9	46	450.28748718533103	898.5604214374621	2	450.2869567871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KAAVTPGKK_	ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232323706-232327997:-|nuORF	96.0336014099291	0.047854655524928534	4				NaN	NaN	0	NaN	321	2115	2436
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2439	11.652	NaN	261.29	30	0	64.201	0.034	+			9573	ELGRVHRP	8	13	482.2768249511719	NaN	0	482.2768249511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ELGRVHRP_	ENST00000272233.5_1_2:20646849-20646981:+|nuORF	12.206847966760668	1.7418937515398478	4				NaN	NaN	0	NaN	322	2115	2436
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2457	11.69	NaN	5344.9	30	0	2346.8	0.214	+			19486	KATGAATPK	9	47	422.7479398072791	843.4813266813583	2	422.74822998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KATGAATPK_	ENSG00000168298|ENST00000304218|H1-4	82.7504851949679	0.08565546331141553	4				NaN	NaN	0	NaN	337	2118	2456
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2458	11.693	NaN	365.73	30	0	99.493	0.106				-1	EKKKLLKM	8	23	517.326904296875	NaN	0	517.326904296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_EKKKLLKM(Oxidation (M))_	nc|ENSG00000157423|Q4G0P3-10|HYDIN;nc|ENSG00000157423|Q4G0P3-8|HYDIN	29.14955571784316	1.7418937515398478	4				NaN	NaN	0	NaN	338	2118	2456
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2459	11.695	NaN	93.085	30	0	19.506	0.035	+			33338	RGVTADGDRV	10	9	523.274169921875	NaN	0	523.274169921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RGVTADGDRV_	nc|ENSG00000272681|A6NKX1|FAM223B;nc|ENSG00000279245|Q8IWN6|FAM223A	8.235088202721068	0.4201028297492154	4				NaN	NaN	0	NaN	339	2118	2456
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2512	11.818	NaN	2922.2	30	0	1264.4	0.142	+			29044	NTAVSQLTK	9	52	481.26949147178397	960.524430010368	2	481.2696228027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NTAVSQLTK_	ENSG00000113810|ENST00000357388|SMC4;ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4;SMC4|p.K628Nfs*23|1|0.11|ENSG00000113810|chr3:160420762-160420762|A/-|frameshift_variant;SMC4|p.R512C|1|0.25|ENSG00000113810|chr3:160417819-160417819|C/T|missense_variant	69.6276240434122	0.14239879520340665	4				NaN	NaN	0	NaN	380	2130	2511
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2530	11.856	NaN	39343	30	0	12134	0.143			+	21102	KKQTNKKK	8	74	501.82476441050966	1001.6349758878193	2	501.8250732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KKQTNKKK_	REV__ENST00000395442.5_1_10:55568369-55568990:-|nuORF	120.62098272573253	0.23366758524054274	4				NaN	NaN	0	NaN	395	2133	2529
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2548	11.894	NaN	2990.3	30	0	328.74	0.142	+			39073	SSSRESVSK	9	52	483.74605590637935	965.4775588795587	2	483.74542236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSSRESVSK_	ENSG00000138162|ENST00000369005|TACC2;nc|ENSG00000138162|O95359-3|TACC2;TACC2|p.E1303Gfs*11|1|0.2|ENSG00000138162|chr10:122086403-122086404|-/G|frameshift_variant;TACC2|p.E1974Rfs*22|1|0.37|ENSG00000138162|chr10:122195118-122195119|-/C|frameshift_variant;TACC2|p.Q783Rfs*32|3|0.32|ENSG00000138162|chr10:122084841-122084841|C/-|frameshift_variant;TACC2|p.V2229Cfs*22|1|0.07|ENSG00000138162|chr10:122211108-122211109|-/A|frameshift_variant	96.66504779109242	0.04607440320619715	4				NaN	NaN	0	NaN	410	2136	2547
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2560	11.922	NaN	3685	30	0	815.6	0.215	+			3137	ASHREMTSK	9	57	523.7558890326444	1045.4972251320887	2	523.7568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASHREMTSK_	ENSG00000150593|ENST00000280154|PDCD4;ENST00000462577.5_1_10:112645037-112653861:+|nuORF;nc|ENSG00000150593|Q53EL6-2|PDCD4	132.757866228626	0.013877640931359021	4				NaN	NaN	0	NaN	419	2139	2559
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2561	11.925	NaN	744.97	30	0	105.57	0.106				-1	GTCGGKPAER	10	28	516.7489420579351	NaN	0	516.7491455078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GTC(Carbamidomethyl (C))GGKPAER_	ENSG00000215012|ENST00000328554|RTL10	24.231819034082204	0.4201028297492154	4				NaN	NaN	0	NaN	420	2139	2559
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2562	11.928	NaN	654.75	30	0	152.77	0.106			+	7980	DSVKVLLR	8	30	465.2922658697112	NaN	0	465.29327392578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DSVKVLLR_	REV__ENSG00000280165|ENST00000409204|PCDH20	40.5726180659479	1.7418937515398478	4				NaN	NaN	0	NaN	421	2139	2559
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2563	11.929	NaN	686.42	30	0	124.31	0.034			+	35737	SDRPSTEE	8	32	460.7019315962181	919.3893102592363	2	460.70184326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SDRPSTEE_	REV__ENSG00000116396|ENST00000438661|KCNC4;REV__ENST00000489935.1_1_1:110754121-110766653:+|nuORF;REV__nc|ENSG00000116396|Q03721-2|KCNC4;REV__nc|ENSG00000116396|Q03721|KCNC4	34.172542307311794	0.6954784234644539	4				NaN	NaN	0	NaN	422	2139	2559
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2574	11.953	NaN	271.97	30	0	32.303	0.152			+	11808	FSSPLSLSVD	10	13	526.2704467773438	NaN	0	526.2704467773438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FSSPLSLSVD_	REV__ENST00000509734.5_2_5:68665744-68666026:+|nuORF	10.865556482863946	0.4201028297492154	4				NaN	NaN	0	NaN	430	2142	2573
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2587	11.982	NaN	6206.6	30	0	1812.6	0.214			+	12255	GATSAPRKTQ	10	61	508.77777099609375	NaN	0	508.77777099609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GATSAPRKTQ_	REV__ENSG00000132613|ENST00000338779|MTSS2	80.45461616416974	0.09722466730825292	4				NaN	NaN	0	NaN	440	2145	2586
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2588	11.986	NaN	629.48	30	0	132.28	0.044			+	9368	EIYGPLPVSD	10	24	545.2764538138998	NaN	0	545.2766723632812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EIYGPLPVSD_	REV__ENSG00000110427|ENST00000658780|KIAA1549L;REV__nc|ENSG00000110427|Q6ZVL6|KIAA1549L	10.265252068803164	0.42010282974921537	4				NaN	NaN	0	NaN	441	2145	2586
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2638	12.094	NaN	2679.5	30	0	1126.5	0.214	+			31962	QQTAAKTK	8	41	438.251007667581	874.487462401962	2	438.2508544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QQTAAKTK_	ENSG00000189308|ENST00000340417|LIN54;nc|ENSG00000189308|Q6MZP7-2|LIN54;nc|ENSG00000189308|Q6MZP7-3|LIN54;nc|ENSG00000189308|Q6MZP7-4|LIN54	93.19546047674547	0.2677966331495483	4				NaN	NaN	0	NaN	482	2154	2637
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2639	12.098	NaN	2947.2	30	0	187.3	0.106	+			21004	KKGSDEKK	8	60	460.26379041244104	918.5130278916821	2	461.5841369628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KKGSDEKK_	CAST|p.E474Kfs*10|1|0.39|ENSG00000153113|chr5:96754695-96754695|A/-|frameshift_variant;ENSG00000153113|ENST00000675179|CAST;ENST00000507487.5_1_5:95998126-96062463:+|nuORF;ENST00000515160.5_1_5:95998126-96031662:+|nuORF;nc|ENSG00000153113|P20810-10|CAST;nc|ENSG00000153113|P20810-5|CAST;nc|ENSG00000153113|P20810-7|CAST;nc|ENSG00000153113|P20810-9|CAST	38.80614096846853	0.6637206697844082	4				NaN	NaN	0	NaN	483	2154	2637
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2640	12.1	NaN	1320.5	30	0	347.97	0.034			+	20703	KGQSRAVPK	9	45	485.79263427184054	969.5707156104811	2	485.792724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KGQSRAVPK_	REV__ENSG00000131044|ENST00000535842|TTLL9;REV__nc|ENSG00000131044|Q3SXZ7-2|TTLL9;REV__TTLL9|p.M166T|1|0.3|ENSG00000131044|chr20:31909915-31909915|T/C|missense_variant	45.97224482568171	0.3502073465782774	4				NaN	NaN	0	NaN	484	2154	2637
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2657	12.135	NaN	56935	30	0	9191.5	0.214	+			41615	SVQKSSGVK	9	88	460.26379041244104	918.5130278916821	2	460.2637634277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVQKSSGVK_	CALD1|p.S665L|1|0.2|ENSG00000122786|chr7:134958223-134958223|C/T|missense_variant;ENSG00000122786|ENST00000361675|CALD1;ENST00000482470.5_1_7:134552484-134644871:+|nuORF;nc|ENSG00000122786|Q05682-2|CALD1;nc|ENSG00000122786|Q05682-3|CALD1;nc|ENSG00000122786|Q05682-4|CALD1;nc|ENSG00000122786|Q05682-5|CALD1	131.61620852596164	0.014413238321579053	4				NaN	NaN	0	NaN	498	2157	2656
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2658	12.139	NaN	15874	30	0	5840.1	0.106	+			14648	GTHKGAIEK	9	62	470.76396497395945	939.5133770147189	2	470.7640075683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTHKGAIEK_	ENSG00000130340|ENST00000392185|SNX9	91.26522074875469	0.06129826844580791	4				NaN	NaN	0	NaN	499	2157	2656
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2659	12.141	NaN	7503.9	30	0	1951	0.034	+			8253	EAGADKRSP	9	55	465.7354273907527	929.4563018483054	2	465.7354736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EAGADKRSP_	ENSG00000104450|ENST00000388798|SPAG1;ENST00000523302.1_1_8:101225364-101237414:+|nuORF	65.46538089061403	0.16805504838372562	4				NaN	NaN	0	NaN	500	2157	2656
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2677	12.178	NaN	4832.8	30	0	772.46	0.214	+			19210	KAAGAGKVT	9	46	401.74253460805863	801.4705162829173	2	401.7426452636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAAGAGKVT_	ENSG00000156508|ENST00000309268|EEF1A1;ENST00000359165.5_1_12:19609181-19609565:-|nuORF;ENST00000417549.1_1_13:28789725-28790031:+|nuORF;ENST00000436459.2_1_9:135895553-135896258:+|nuORF;ENST00000447052.1_1_21:24762753-24763314:+|nuORF;ENST00000547505.2_1_12:44054544-44054901:+|nuORF;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	95.81516180277367	0.04847050768394289	4				NaN	NaN	0	NaN	515	2160	2676
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2678	12.182	NaN	2147.7	30	0	472.95	0.033	+			19485	KATEPLRS	8	49	451.2582408330301	900.5019287328602	2	451.25836181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KATEPLRS_	ENSG00000182463|ENST00000371497|TSHZ2;nc|ENSG00000182463|Q9NRE2-2|TSHZ2;TSHZ2|p.M819*|2|0.51|ENSG00000182463|chr20:53255906-53255906|C/-|frameshift_variant;TSHZ2|p.M819Hfs*11|1|0.25|ENSG00000182463|chr20:53255905-53255906|-/C|frameshift_variant;TSHZ2|p.S772Afs*48|1|0.37|ENSG00000182463|chr20:53255769-53255769|A/-|frameshift_variant	53.351449002276354	0.5676011784961348	4				NaN	NaN	0	NaN	516	2160	2676
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2696	12.217	NaN	21145	30	0	8515	0.214			+	-1	TAMKPVDKL	9	49	340.19268798828125	NaN	0	340.19268798828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_TAM(Oxidation (M))KPVDKL_	REV__ENST00000297792.9_1_6:18161585-18171663:+|nuORF	31.529811441608018	0.3183796599642538	4				NaN	NaN	0	NaN	531	2163	2695
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2697	12.221	NaN	5654.8	30	0	1519.2	0.106			+	21103	KKQTNKKK	8	57	501.82476441050966	1001.6349758878193	2	501.8241271972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KKQTNKKK_	REV__ENST00000395442.5_1_10:55568369-55568990:-|nuORF	93.19546047674547	0.2677966331495483	4				NaN	NaN	0	NaN	532	2163	2695
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2698	12.223	NaN	431.88	30	0	43.196	0.106				-1	LMAPVSAK	8	29	416.7353210449219	NaN	0	416.7353210449219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_LM(Oxidation (M))APVSAK_	ENSG00000265972|ENST00000582401|TXNIP;ENST00000488537.1_1_1:145439826-145440208:+|nuORF;nc|ENSG00000265972|Q9H3M7-2|TXNIP	20.481830146152948	1.741893751539848	4				NaN	NaN	0	NaN	533	2163	2695
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2699	12.225	NaN	1803.1	30	0	931.74	0.106			+	20976	KKESPRPS	8	46	464.7640075683594	NaN	0	464.7640075683594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KKESPRPS_	REV__ENSG00000108932|ENST00000580666|SLC16A6;REV__SLC16A6|p.A281V|1|0.37|ENSG00000108932|chr17:68271318-68271318|G/A|missense_variant;REV__SLC16A6|p.F392Lfs*8|1|0.23|ENSG00000108932|chr17:68270984-68270984|A/-|frameshift_variant;REV__SLC16A6|p.P282L|1|0.28|ENSG00000108932|chr17:68271315-68271315|G/A|missense_variant	68.78682469695295	1.7418937515398478	4				NaN	NaN	0	NaN	534	2163	2695
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2700	12.227	NaN	195.88	30	0	51.646	0.106			+	-1	VKPMSLNVS	9	11	330.84906005859375	NaN	0	330.84906005859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_VKPM(Oxidation (M))SLNVS_	REV__AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;REV__ENSG00000124942|ENST00000378024|AHNAK	8.693696342081763	0.40727630907727536	4				NaN	NaN	0	NaN	535	2163	2695
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2701	12.228	NaN	207.37	30	0	49.46	0.034			+	43673	TKCITVRQ	8	19	474.7681579589844	NaN	0	474.7681579589844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TKCITVRQ_	REV__CELSR2-KIAA1324|1|fusion;REV__ENSG00000116299|ENST00000369939|ELAPOR1;REV__ENST00000369936.2_1_1:109730792-109745631:+|nuORF;REV__ENST00000369938.5_1_1:109730226-109745631:+|nuORF;REV__ENST00000527996.5_1_1:109656894-109745573:+|nuORF;REV__nc|ENSG00000116299|Q6UXG2-2|ELAPOR1;REV__nc|ENSG00000116299|Q6UXG2-3|ELAPOR1;REV__nc|ENSG00000116299|Q6UXG2-4|ELAPOR1	18.324413293986947	1.7418937515398478	4				NaN	NaN	0	NaN	536	2163	2695
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2753	12.342	NaN	2519.2	30	0	679.36	0.142	+			21771	KQSAPVSSK	9	53	466.2643153277827	930.5140777223654	2	466.26483154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KQSAPVSSK_	ENSG00000163349|ENST00000426820|HIPK1;nc|ENSG00000163349|Q86Z02-2|HIPK1;nc|ENSG00000163349|Q86Z02-3|HIPK1;nc|ENSG00000163349|Q86Z02-4|HIPK1	58.2462437865262	0.22823408064396822	4				NaN	NaN	0	NaN	579	2172	2752
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2771	12.38	NaN	9022.9	30	0	7660.6	0.214			+	29395	PARKGAKG	8	22	392.7427689922447	783.4709850512894	2	392.7433166503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PARKGAKG_	REV__ENSG00000079841|ENST00000521978|RIMS1;REV__nc|ENSG00000079841|Q86UR5-2|RIMS1;REV__nc|ENSG00000079841|Q86UR5-3|RIMS1;REV__nc|ENSG00000079841|Q86UR5-4|RIMS1;REV__nc|ENSG00000079841|Q86UR5-5|RIMS1;REV__nc|ENSG00000079841|Q86UR5-6|RIMS1;REV__nc|ENSG00000079841|Q86UR5-7|RIMS1;REV__nc|ENSG00000079841|Q86UR5-8|RIMS1;REV__RIMS1|p.R824*|1|0.13|ENSG00000079841|chr6:72251013-72251014|-/T|frameshift_variant	1.619023411512541	0.7811762264352071	4				NaN	NaN	0	NaN	594	2175	2770
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2772	12.384	NaN	2005.6	30	0	219.26	0.106			+	33547	RLEIPYGECA	10	39	384.19158935546875	NaN	0	384.19158935546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RLEIPYGECA_	REV__ADGRL1|p.Q699Rfs*47|1|0.4|ENSG00000072071|chr19:14159159-14159159|G/-|frameshift_variant;REV__ENSG00000072071|ENST00000361434|ADGRL1;REV__nc|ENSG00000072071|O94910|ADGRL1	21.9598887501803	0.4201028297492154	4				NaN	NaN	0	NaN	595	2175	2770
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2773	12.386	NaN	4783.6	30	0	1346.2	0.106			+	24516	LGKKTLKHL	9	52	519.3449667298571	1036.6753805265141	2	519.3455200195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LGKKTLKHL_	REV__ENSG00000006607|ENST00000264042|FARP2	85.16082228582465	0.07850854922700509	4				NaN	NaN	0	NaN	596	2175	2770
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2774	12.388	NaN	656.83	30	0	224.18	0.036	+			35291	SALYDVRTI	9	20	346.5271301269531	NaN	0	346.5271301269531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SALYDVRTI_	ENSG00000175063|ENST00000356455|UBE2C;nc|ENSG00000175063|O00762-2|UBE2C;nc|ENSG00000175063|O00762-3|UBE2C	27.882242232435846	0.3367954786602879	4				NaN	NaN	0	NaN	597	2175	2770
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2792	12.424	NaN	32984	30	0	3873.3	0.214				-1	 	0	54	431.78410409860703	861.5536552640141	2	431.7838439941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	612	2178	2791
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2793	12.427	NaN	2547.8	30	0	544.89	0.106				-1	 	0	43	394.76555704093033	787.5165611486607	2	394.7655944824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	613	2178	2791
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2794	12.43	NaN	594.34	30	0	158.93	0.038	+			1720	AGYEKLGYRP	10	26	385.2037439246524	1152.589402374157	3	385.2038269042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AGYEKLGYRP_	sp|F7V999|US33A_HCMVMUncharacterizedproteinUS33AOS=Humancytomegalovirus(strainMerlin)OX=295027GN=US33APE=4SV=1	22.579656572578934	0.6954366826851017	4				NaN	NaN	0	NaN	614	2178	2791
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2812	12.465	NaN	8719.7	30	0	4702.4	0.214	+			32305	QTQGGGSVTK	10	54	481.74831489472416	961.4820768562483	2	481.7481994628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QTQGGGSVTK_	ENSG00000160789|ENST00000368300|LMNA;ENST00000368298.2_1_1:156104977-156106341:+|nuORF;ENST00000496738.5_1_1:156104620-156106879:+|nuORF;nc|ENSG00000160789|P02545-2|LMNA;nc|ENSG00000160789|P02545-3|LMNA;nc|ENSG00000160789|P02545-4|LMNA;nc|ENSG00000160789|P02545-5|LMNA;nc|ENSG00000160789|P02545-6|LMNA	101.45984612302182	0.07336148045341315	4				NaN	NaN	0	NaN	629	2181	2811
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2813	12.469	NaN	49838	30	0	11157	0.106	+			5390	ATYETKESKK	10	84	395.5431793221984	1183.6077085667953	3	395.543212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATYETKESKK_	ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65623404-65625570:-|nuORF;nc|ENSG00000165410|Q9Y281-3|CFL2	101.45984612302182	0.07336148045341315	4				NaN	NaN	0	NaN	630	2181	2811
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2814	12.471	NaN	1340.8	30	0	197	0.106	+			19340	KAKKPAAAGVK	11	36	534.8478777141738	NaN	0	534.8480224609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KAKKPAAAGVK_	ENSG00000184357|ENST00000331442|H1-5	54.722347961057174	0.2814010645723107	4				NaN	NaN	0	NaN	631	2181	2811
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2815	12.473	NaN	3057.9	30	0	1380.8	0.036			+	-1	MLLPLLKPK	9	40	356.9009704589844	NaN	0	356.9009704589844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_M(Oxidation (M))LLPLLKPK_	REV__ENST00000473989.7_2_7:138968337-138968418:+|nuORF	26.69291269510374	0.34280015626154364	4				NaN	NaN	0	NaN	632	2181	2811
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2833	12.509	NaN	6468	30	0	1415.1	0.143	+			32842	RCQKAMTAK	9	64	518.7734467522656	NaN	0	518.7733154296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RCQKAMTAK_	ENSG00000126267|ENST00000649813|COX6B1	66.42927471994793	0.121898005645852	4				NaN	NaN	0	NaN	647	2184	2832
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2851	12.547	NaN	2407.1	30	0	334.16	0.141			+	2817	ASAAALQAQ	9	39	415.72191991019577	829.4292868871916	2	415.72210693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASAAALQAQ_	REV__ENSG00000117505|ENST00000370272|DR1;REV__ENST00000481583.1_1_1:93821317-93826193:+|nuORF	87.75429964447693	0.0711966946989736	4				NaN	NaN	0	NaN	662	2187	2850
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2869	12.585	NaN	13102	30	0	1949.8	0.214	+			28704	NNGLANSIRD	10	67	537.2708499710484	1072.5271470088967	2	537.2713623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NNGLANSIRD_	ENSG00000053747|ENST00000313654|LAMA3;LAMA3|p.T2580Hfs*68|1|0.55|ENSG00000053747|chr18:23915376-23915376|A/-|frameshift_variant;nc|ENSG00000053747|Q16787-1|LAMA3;nc|ENSG00000053747|Q16787-3|LAMA3;nc|ENSG00000053747|Q16787-4|LAMA3	42.396135135203025	0.5270658956260207	4				NaN	NaN	0	NaN	677	2190	2868
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2870	12.589	NaN	1850.7	30	0	430.44	0.106	+			43827	TLSKSDAK	8	37	425.23760986328125	NaN	0	425.23760986328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TLSKSDAK_	CHID1|p.A30T|1|0.11|ENSG00000177830|chr11:904729-904729|C/T|missense_variant;ENSG00000177830|ENST00000323578|CHID1;ENST00000526714.5_1_11:870485-904855:-|nuORF;nc|ENSG00000177830|Q9BWS9-2|CHID1;nc|ENSG00000177830|Q9BWS9-3|CHID1	47.657333605630114	1.7418937515398478	4				NaN	NaN	0	NaN	678	2190	2868
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2871	12.591	NaN	1721.9	30	0	410.03	0.035			+	31397	QKKKQSKK	8	37	501.82476441050966	1001.6349758878193	2	501.8249816894531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QKKKQSKK_	REV__ENSG00000176208|ENST00000321990|ATAD5	68.78682469695295	0.41700713582915416	4				NaN	NaN	0	NaN	679	2190	2868
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2889	12.629	NaN	961.21	30	0	204.4	0.214	+			34311	RTMETAKEK	9	40	547.2881469726562	NaN	0	547.2881469726562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTMETAKEK_	ENSG00000166866|ENST00000300119|MYO1A	41.080066990542036	0.2681650218997241	4				NaN	NaN	0	NaN	694	2193	2888
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2890	12.632	NaN	294.28	30	0	166.94	0.035			+	-1	LTMEIFVQ	8	11	498.7581481933594	NaN	0	498.7581481933594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LTM(Oxidation (M))EIFVQ_	REV__ENSG00000166866|ENST00000300119|MYO1A	8.822329726475273	1.7418937515398478	4				NaN	NaN	0	NaN	695	2193	2888
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2908	12.669	NaN	1682.9	30	0	208.63	0.214	+			24964	LLAQVEQEGPL	11	37	399.5567626953125	NaN	0	399.5567626953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LLAQVEQEGPL_	ENST00000416600.6_1_20:3846990-3847266:+|nuORF	24.231819034082204	0.456735970842152	4				NaN	NaN	0	NaN	710	2196	2907
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2909	12.672	NaN	443.19	30	0	174.94	0.036			+	22628	KTVELINYL	9	25	546.8179321289062	NaN	0	546.8179321289062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTVELINYL_	REV__L1MD2_dup3350|chr5:176309943-176310863:+|2.4169742649477106|0.265229905058228|3.19|483.0|9|1|sense	25.57405402267927	0.3484490411150625	4				NaN	NaN	0	NaN	711	2196	2907
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2927	12.709	NaN	5468	30	0	1852.3	0.146	+			22740	KVCEKVQRK	9	43	392.2288310931486	NaN	0	392.2287902832031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_KVC(Carbamidomethyl (C))EKVQRK_	ENSG00000114126|ENST00000489671|TFDP2;ENSG00000198176|ENST00000375370|TFDP1;ENST00000453595.1_1_X:36980271-36981156:-|nuORF;ENST00000544902.5_1_13:114277566-114294579:+|nuORF;nc|ENSG00000114126|Q14188-2|TFDP2;nc|ENSG00000114126|Q14188-3|TFDP2;nc|ENSG00000114126|Q14188-4|TFDP2;nc|ENSG00000114126|Q14188-5|TFDP2;nc|ENSG00000114126|Q14188-6|TFDP2;nc|ENSG00000114126|Q14188-7|TFDP2;nc|ENSG00000114126|Q14188-8|TFDP2;nc|ENSG00000198176|Q14186-2|TFDP1	51.19269402634007	0.19847346126499396	4				NaN	NaN	0	NaN	726	2199	2926
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2945	12.748	NaN	17526	30	0	8448.5	0.214	+			34939	SAAKAVKPKA	10	70	485.8058478180815	969.597142702963	2	487.2750244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAAKAVKPKA_	ENSG00000187837|ENST00000343677|H1-2	44.377184641726394	0.5088115166961078	4				NaN	NaN	0	NaN	741	2202	2944
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2946	12.752	NaN	2722.1	30	0	630.27	0.106			+	20430	KETVEPVKRKQ	11	48	447.9334240826466	1340.7784428481398	3	448.26800537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KETVEPVKRKQ_	REV__ENSG00000146540|ENST00000397098|C7orf50;REV__ENST00000488073.1_1_7:1149040-1167021:-|nuORF	33.03940026070387	0.6432348334061824	4				NaN	NaN	0	NaN	742	2202	2944
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2947	12.754	NaN	2500.9	30	0	476.78	0.106	+			888	AEHKAKSL	8	43	442.2540588378906	NaN	0	442.2540588378906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEHKAKSL_	ENSG00000148296|ENST00000372022|SURF6	79.71258880314673	1.7418937515398478	4				NaN	NaN	0	NaN	743	2202	2944
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2948	12.756	NaN	7104.7	30	0	3606.9	0.106	+			5205	ATTSNTVSK	9	44	454.73782840099017	907.4611038687804	2	454.7384033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATTSNTVSK_	ENSG00000177469|ENST00000357037|CAVIN1	36.446750945000026	0.4619375763483977	4				NaN	NaN	0	NaN	744	2202	2944
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2949	12.758	NaN	862.31	30	0	266.36	0.106	+			44403	TSLNSSQI	8	29	425.21990966796875	NaN	0	425.21990966796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TSLNSSQI_	ENTHD1|p.M583T|1|0.06|ENSG00000176177|chr22:39743755-39743755|A/G|missense_variant	49.44154591367651	1.7418937515398478	4				NaN	NaN	0	NaN	745	2202	2944
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2950	12.76	NaN	2479.5	30	0	656.98	0.035			+	39032	SSSLQFLLA	9	28	322.5138854980469	NaN	0	322.5138854980469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSSLQFLLA_	REV__ENST00000521286.1_1_8:86131505-86132537:-|nuORF	35.61828744233558	0.29773779453147337	4				NaN	NaN	0	NaN	746	2202	2944
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2968	12.797	NaN	16385	30	0	5119.2	0.214	+			14348	GTAAKSITKK	10	55	335.5412831306487	NaN	0	335.541259765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTAAKSITKK_	ENSG00000133574|ENST00000255945|GIMAP4	114.85826248499774	0.017247389293631288	4				NaN	NaN	0	NaN	761	2205	2967
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2969	12.801	NaN	1092.5	30	0	497.8	0.106	+			12055	GAAAHLPK	8	31	382.7243347167969	NaN	0	382.7243347167969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GAAAHLPK_	ENSG00000151702|ENST00000527786|FLI1;ENST00000608055.1_1_11:128628003-128638319:+|nuORF	21.70233525837049	1.7418937515398478	4				NaN	NaN	0	NaN	762	2205	2967
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2970	12.803	NaN	760.06	30	0	125.99	0.106	+			47319	VPAAPSPG	8	22	348.1891784667969	NaN	0	348.1891784667969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VPAAPSPG_	ENST00000535420.5_1_1:154989902-154990361:+|nuORF	15.63621529709179	1.7418937515398478	4				NaN	NaN	0	NaN	763	2205	2967
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2971	12.804	NaN	3201.1	30	0	1185	0.038			+	21864	KRLLDSLKNL	10	41	400.5873900740353	1198.7403408223058	3	400.58734130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KRLLDSLKNL_	REV__ENSG00000196116|ENST00000355295|TDRD7;REV__nc|ENSG00000196116|Q8NHU6-2|TDRD7;REV__nc|ENSG00000196116|Q8NHU6-3|TDRD7;REV__TDRD7|p.N797Sfs*58|1|0.03|ENSG00000196116|chr9:97480915-97480916|-/GTAATGTTAAT|frameshift_variant	15.641811463095205	0.7369665665077569	4				NaN	NaN	0	NaN	764	2205	2967
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2989	12.842	NaN	5739.9	30	0	654.06	0.142	+			22689	KVAGAATPKK	10	62	485.8058478180815	969.597142702963	2	485.8059997558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVAGAATPKK_	ENSG00000124575|ENST00000244534|H1-3	154.0112374973812	0.007783311651969589	4				NaN	NaN	0	NaN	779	2208	2988
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3007	12.881	NaN	2743.9	30	0	902.3	0.214	+			38335	SRKDQCKE	8	61	497.2435302734375	NaN	0	497.2435302734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SRKDQCKE_	ENSG00000156232|ENST00000286760|WHAMM	45.97224482568171	1.7418937515398478	4				NaN	NaN	0	NaN	794	2211	3006
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3008	12.884	NaN	3509.2	30	0	752.66	0.106			+	9515	EKWPQSTDKL	10	49	411.21503635828805	1230.6232796750642	3	411.57025146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EKWPQSTDKL_	REV__ENSG00000198569|ENST00000673835|SLC34A3	22.579656572578934	0.6954366826851017	4				NaN	NaN	0	NaN	795	2211	3006
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3009	12.886	NaN	401.33	30	0	121.16	0.106	+			46970	VKKKNDNLLK	10	21	600.376220703125	NaN	0	600.376220703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VKKKNDNLLK_	ENSG00000188219|ENST00000683005|POTEE;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;POTEE|p.N792Kfs*34|1|0.2|ENSG00000188219|chr2:131263828-131263829|-/A|frameshift_variant	19.996771675451527	0.4201028297492154	4				NaN	NaN	0	NaN	796	2211	3006
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3010	12.888	NaN	2354.9	30	0	414.96	0.037	+			21468	KNGNSRRPKA	10	34	376.5511247000178	1126.6315447002535	3	376.55169677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KNGNSRRPKA_	nc|ENSG00000135525|Q14244-4|MAP7;nc|ENSG00000135525|Q14244-7|MAP7	27.047317107675042	0.6589519614906109	4				NaN	NaN	0	NaN	797	2211	3006
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3028	12.926	NaN	1969.3	30	0	175.17	0.214	+			14227	GSSRQSIQK	9	52	495.770157872106	989.525762811012	2	495.7698059082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSSRQSIQK_	ENSG00000189060|ENST00000340857|H1-0;nc|ENSG00000189060|P07305-2|H1-0	68.84614121027924	0.14577793175421136	4				NaN	NaN	0	NaN	812	2214	3027
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3029	12.929	NaN	3280.1	30	0	1407.2	0.106				-1	FVIECKIVK	9	31	379.2239678804413	1134.650074241524	3	379.2239074707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_FVIEC(Carbamidomethyl (C))KIVK_	tr|U7SRM3|U7SRM3_FUSNUAAA-ATPase-likedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01578PE=4SV=1	19.1035232394073	0.6112419832031293	4				NaN	NaN	0	NaN	813	2214	3027
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3030	12.931	NaN	9296.9	30	0	2350.4	0.039			+	30068	PQLAAAEQYIQ	11	61	411.21503635828805	1230.6232796750642	3	411.2149658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PQLAAAEQYIQ_	REV__ENSG00000133687|ENST00000539277|TMTC1;REV__nc|ENSG00000133687|Q8IUR5-1|TMTC1;REV__nc|ENSG00000133687|Q8IUR5-2|TMTC1;REV__nc|ENSG00000133687|Q8IUR5-4|TMTC1;REV__TMTC1|p.E735Kfs*5|1|0.3|ENSG00000133687|chr12:29516454-29516454|T/-|frameshift_variant	43.650786325866115	0.5079891456189096	4				NaN	NaN	0	NaN	814	2214	3027
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3048	12.968	NaN	2026.8	30	0	667.35	0.214	+			38533	SSDPKSSHLK	10	46	543.2841186523438	NaN	0	543.2841186523438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSDPKSSHLK_	ENSG00000171992|ENST00000307662|SYNPO;nc|ENSG00000171992|Q8N3V7-3|SYNPO;nc|ENSG00000171992|Q8N3V7|SYNPO;SYNPO|p.E657Rfs*2|1|0.5|ENSG00000171992|chr5:150649508-150649508|G/-|frameshift_variant;SYNPO|p.V892Cfs*70|1|0.42|ENSG00000171992|chr5:150650212-150650212|C/-|frameshift_variant	70.8162118820467	0.1459513513137803	4				NaN	NaN	0	NaN	829	2217	3047
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3049	12.972	NaN	1160	30	0	355.74	0.106	+			21163	KKVKSREK	8	30	501.82476441050966	1001.6349758878193	2	501.8247375488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KKVKSREK_	ENSG00000114439|ENST00000325805|BBX;nc|ENSG00000114439|Q8WY36-2|BBX	60.97194046774394	0.49215940876911696	4				NaN	NaN	0	NaN	830	2217	3047
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3050	12.974	NaN	2456.4	30	0	606.3	0.036	+			49077	VVKPKKAAPK	10	45	533.3611144967647	1064.7076760603293	2	533.3616943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVKPKKAAPK_	ENSG00000187837|ENST00000343677|H1-2	91.26522074875469	0.12383023862516404	4				NaN	NaN	0	NaN	831	2217	3047
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3068	13.01	NaN	6711.7	30	0	802.28	0.214	+			44811	TTSAKTTMK	9	67	484.75753360049026	967.5005142677805	2	484.7575378417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTSAKTTMK_	ENSG00000176945|ENST00000447234|MUC20;nc|ENSG00000176945|Q8N307-3|MUC20	112.10723106719422	0.02684780151337622	4				NaN	NaN	0	NaN	846	2220	3067
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3069	13.014	NaN	1031.1	30	0	243.08	0.034	+			42679	TCASCVHSI	9	40	460.70190857604445	919.3892642188889	2	460.7013244628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TCASCVHSI_	ENSG00000123191|ENST00000242839|ATP7B;nc|ENSG00000123191|P35670-2|ATP7B;nc|ENSG00000123191|P35670-4|ATP7B	51.33545320467046	0.2872990594074956	4				NaN	NaN	0	NaN	847	2220	3067
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3087	13.051	NaN	10558	30	0	3835	0.214			+	27349	MIKSNCLK	8	62	468.753748554529	935.492944175858	2	468.7537536621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MIKSNCLK_	REV__ENST00000496239.5_1_1:16776277-16776712:+|nuORF	94.00642277110589	0.2653416297186628	4				NaN	NaN	0	NaN	862	2223	3086
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3088	13.055	NaN	1852.6	30	0	269.47	0.106			+	33501	RKLGEDIIK	9	53	536.3304729458183	NaN	0	536.3304443359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RKLGEDIIK_	REV__ENSG00000171806|ENST00000310392|METTL18	40.77816245573522	0.2702456086868081	4				NaN	NaN	0	NaN	863	2223	3086
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3089	13.057	NaN	1361.7	30	0	220.04	0.038			+	16074	HCFLIWKKL	9	39	396.5632629394531	NaN	0	396.5632629394531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HCFLIWKKL_	REV__chr20:34555794-34559208|211|15.49|0.68|4.52|+|0|TE_info:AluJr,AluJr_dup81442,Alu,SINE,donor,-,34555654,34555794|None,MAP1LC3A|1	40.77816245573522	0.2702456086868081	4				NaN	NaN	0	NaN	864	2223	3086
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3107	13.094	NaN	1054.8	30	0	275.01	0.214			+	13496	GLLVLPLRPH	10	31	372.24005126953125	NaN	0	372.24005126953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GLLVLPLRPH_	REV__ENST00000370210.3_2_X:152736080-152736602:-|nuORF	22.579656572578934	0.4201028297492154	4				NaN	NaN	0	NaN	879	2226	3106
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3108	13.098	NaN	1735	30	0	425.7	0.106	+			3836	ATAKDTYNK	9	49	506.2587585449219	NaN	0	506.2587585449219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATAKDTYNK_	ATL1|p.M371Wfs*29|1|0.04|ENSG00000198513|chr14:50623234-50623234|A/-|frameshift_variant;ENSG00000198513|ENST00000358385|ATL1;nc|ENSG00000198513|Q8WXF7-2|ATL1	56.43379154798735	0.16452882468284893	4				NaN	NaN	0	NaN	880	2226	3106
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3109	13.1	NaN	1985.5	30	0	1420.4	0.106			+	-1	AGHKLLLKCI	10	23	384.9037780761719	NaN	0	384.9037780761719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_AGHKLLLKC(Carbamidomethyl (C))I_	REV__ENSG00000173273|ENST00000310430|TNKS	23.52269567125451	0.42010282974921537	4				NaN	NaN	0	NaN	881	2226	3106
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3110	13.102	NaN	2402.6	30	0	818.03	0.034	+			21753	KQPKSSLR	8	35	472.28747294261217	NaN	0	472.23370361328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KQPKSSLR_	PSIP1|p.K229Sfs*36|1|0.45|ENSG00000164985|chr9:15474181-15474181|T/-|frameshift_variant	40.77816245573522	1.7418937515398478	4				NaN	NaN	0	NaN	882	2226	3106
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3128	13.139	NaN	19921	30	0	3021.1	0.214	+			34341	RTQAAAVQK	9	75	486.78268243855337	971.5508119439068	2	486.78271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTQAAAVQK_	ARHGAP28|p.F355Lfs*8|2|0.4|ENSG00000088756|chr18:6873514-6873514|T/-|frameshift_variant;ARHGAP28|p.G328Wfs*4|1|0.21|ENSG00000088756|chr18:6873432-6873433|-/T|frameshift_variant;ARHGAP28|p.R364Gfs*7|1|0.08|ENSG00000088756|chr18:6873541-6873541|A/-|frameshift_variant;ENSG00000088756|ENST00000383472|ARHGAP28;ENSG00000146376|ENST00000368149|ARHGAP18;nc|ENSG00000088756|Q9P2N2-2|ARHGAP28;nc|ENSG00000146376|Q8N392-2|ARHGAP18	128.60217544463768	0.015992218256422188	4				NaN	NaN	0	NaN	897	2229	3127
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3129	13.143	NaN	4361.5	30	0	850.58	0.106	+			47640	VSASSLPSF	9	62	447.73000074012174	NaN	0	447.7300109863281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSASSLPSF_	ENST00000468303.5_1_1:24742648-24743062:-|nuORF	82.30502934623384	0.06348534290027165	4				NaN	NaN	0	NaN	898	2229	3127
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3130	13.145	NaN	4198.2	30	0	493.85	0.106	+			32973	REDSQRPGA	9	62	508.24930053135074	1014.4840481295015	2	508.2496337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_REDSQRPGA_	chr12:54282662-54282800|482|460.96|0.0|25.46|+|ENST00000677249|HNRNPA1,HNRNPA1;ENSG00000135486|ENST00000340913|HNRNPA1;ENSG00000139675|ENST00000357495|HNRNPA1L2;ENST00000391992.3_1_12:9180728-9181528:-|nuORF;ENST00000422644.2_1_X:73693403-73693721:-|nuORF;ENST00000444886.1_1_9:128358162-128358726:+|nuORF;ENST00000457695.2_1_X:100110922-100111255:-|nuORF;ENST00000458678.1_1_1:241083162-241083366:+|nuORF;ENST00000510646.1_1_5:135764749-135765112:+|nuORF;ENST00000546565.1_1_12:93277549-93277891:+|nuORF;nc|ENSG00000135486|P09651-2|HNRNPA1;nc|ENSG00000135486|P09651-3|HNRNPA1	95.81516180277367	0.04847050768394289	4				NaN	NaN	0	NaN	899	2229	3127
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3131	13.147	NaN	1908.4	30	0	439.82	0.106	+			3896	ATAQGTPEK	9	41	451.73211713888145	NaN	0	451.7323913574219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATAQGTPEK_	ENSG00000177150|ENST00000651643|FAM210A;ENST00000588475.1_1_18:13666687-13682076:-|nuORF	53.08895987439943	0.18540527177656715	4				NaN	NaN	0	NaN	900	2229	3127
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3132	13.149	NaN	291.45	30	0	32.81	0.035				-1	NMKPMLKK	8	25	503.2823181152344	NaN	0	503.2823181152344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_NMKPM(Oxidation (M))LKK_	ENSG00000214842|ENST00000399080|RAD51AP2;RAD51AP2|p.F682Lfs*10|1|0.37|ENSG00000214842|chr2:17516370-17516370|A/-|frameshift_variant;RAD51AP2|p.K861Ifs*17|1|0.05|ENSG00000214842|chr2:17515831-17515834|TCTT/-|frameshift_variant;RAD51AP2|p.P866Qfs*13|1|0.23|ENSG00000214842|chr2:17515821-17515821|A/-|frameshift_variant;RAD51AP2|p.V876Dfs*5|1|0.03|ENSG00000214842|chr2:17515789-17515790|-/CTGGT|frameshift_variant;RAD51AP2|p.Y754Mfs*3|1|0.19|ENSG00000214842|chr2:17516156-17516156|A/-|frameshift_variant	13.775330524044264	1.7418937515398478	4				NaN	NaN	0	NaN	901	2229	3127
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3150	13.186	NaN	39149	30	0	19569	0.214				-1	 	0	70	478.76691614541767	955.5192793576354	2	478.7669677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	916	2232	3149
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3151	13.19	NaN	4152.3	30	0	770.98	0.106	+			19568	KCSKPNVQK	9	65	516.2865034412376	1030.5584539492752	2	516.287841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KCSKPNVQK_	ENSG00000113328|ENST00000340828|CCNG1;nc|ENSG00000113328|P51959-2|CCNG1	101.25262130126117	0.03792372629710479	4				NaN	NaN	0	NaN	917	2232	3149
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3152	13.192	NaN	5313.9	30	0	776.36	0.106	+			34652	RVQKSISQK	9	61	358.5525207519531	NaN	0	358.5525207519531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RVQKSISQK_	ENSG00000164576|ENST00000297109|SAP30L;ENST00000523198.5_1_5:153826164-153832030:+|nuORF;nc|ENSG00000164576|Q9HAJ7-2|SAP30L;nc|ENSG00000164576|Q9HAJ7-3|SAP30L	39.252832667884924	0.27938773122138094	4				NaN	NaN	0	NaN	918	2232	3149
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3153	13.194	NaN	1054.3	30	0	226.95	0.035			+	48432	VTKIPFGVK	9	25	330.2099609375	NaN	0	330.2099609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTKIPFGVK_	REV__ENSG00000218819|ENST00000405799|TDRD15	25.57405402267927	0.3484490411150625	4				NaN	NaN	0	NaN	919	2232	3149
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3172	13.227	NaN	93927	30	0	23505	0.214	+			5004	ATSAPGNAR	9	72	422.71701855993666	843.4194841866733	2	422.7170715332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSAPGNAR_	DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;nc|ENSG00000187908|Q9UGM3-2|DMBT1;nc|ENSG00000187908|Q9UGM3-2|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-4|DMBT1;nc|ENSG00000187908|Q9UGM3-4|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-8|DMBT1;nc|ENSG00000187908|Q9UGM3-8|DMBT1;nc|ENSG00000187908|Q9UGM3-9|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1	95.81516180277367	0.04847050768394289	4				NaN	NaN	0	NaN	935	2235	3171
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3173	13.231	NaN	33066	30	0	5428.1	0.106			+	21138	KKSSHSVKK	9	91	514.8136915275687	1027.6128301219373	2	514.8141479492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KKSSHSVKK_	REV__ENSG00000116731|ENST00000311066|PRDM2;REV__nc|ENSG00000116731|Q13029-2|PRDM2;REV__nc|ENSG00000116731|Q13029-3|PRDM2;REV__nc|ENSG00000116731|Q13029-5|PRDM2;REV__PRDM2|p.P1648Qfs*14|1|0.24|ENSG00000116731|chr1:13782731-13782731|G/-|frameshift_variant	87.69643885390035	0.07135982304947239	4				NaN	NaN	0	NaN	936	2235	3171
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3174	13.233	NaN	2529.7	30	0	742.13	0.106	+			21719	KQKKPLVGK	9	37	342.5658234199847	NaN	0	342.5657958984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KQKKPLVGK_	ENSG00000174444|ENST00000307961|RPL4;ENST00000422486.1_1_3:185135285-185135612:-|nuORF;ENST00000567229.5_1_15:66791747-66793486:-|nuORF	51.33545320467046	0.19748963086191895	4				NaN	NaN	0	NaN	937	2235	3171
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3175	13.235	NaN	1645.9	30	0	506.45	0.106	+			19475	KASSSLPKK	9	47	473.28967192441	944.56479091562	2	473.2899169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KASSSLPKK_	ENSG00000104979|ENST00000588234|C19orf53;ENST00000588858.5_1_19:13886394-13889009:+|nuORF	80.45461616416974	0.09558281504443908	4				NaN	NaN	0	NaN	938	2235	3171
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3176	13.237	NaN	462.13	30	0	69.516	0.106				-1	ITCLCWCV	8	20	527.7283325195312	NaN	0	527.7283325195312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C)	_ITC(Carbamidomethyl (C))LC(Carbamidomethyl (C))WCV_	HERVH-int_dup3525|chrX:4542186-4542680:-|2.3360434519655686|0.0028617900308425|9.67|450.0|26|3|anti-sense	15.63621529709179	1.7418937515398478	4				NaN	NaN	0	NaN	939	2235	3171
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3177	13.238	NaN	506.89	30	0	172.17	0.106				-1	TDKQMDKK	8	15	505.2524698495534	1008.4903867659068	2	505.25213623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_TDKQM(Oxidation (M))DKK_	ENSG00000185917|ENST00000332131|SETD4;ENST00000487297.5_1_21:37408417-37414196:-|nuORF;nc|ENSG00000185917|Q9NVD3-3|SETD4	10.265252068803164	0.7844391158406573	4				NaN	NaN	0	NaN	940	2235	3171
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3178	13.24	NaN	2197.5	30	0	672.29	0.036	+			46268	VEHEQREAA	9	33	534.7574747481748	1067.5003965631495	2	534.7578735351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VEHEQREAA_	ENSG00000168264|ENST00000366609|IRF2BP2;IRF2BP2|p.K554Nfs*26|1|0.21|ENSG00000168264|chr1:234607239-234607239|T/-|frameshift_variant;nc|ENSG00000168264|Q7Z5L9-2|IRF2BP2	58.22992032128504	0.22837015374068087	4				NaN	NaN	0	NaN	941	2235	3171
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3196	13.278	NaN	7256.1	30	0	3107.6	0.214	+			6252	AVSKEVTRK	9	46	339.8730243682025	NaN	0	339.873046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVSKEVTRK_	ENSG00000114850|ENST00000265044|SSR3;ENST00000467733.1_1_3:156262080-156272878:-|nuORF;ENST00000498205.5_1_3:156260994-156266845:-|nuORF;nc|ENSG00000114850|Q9UNL2-2|SSR3	37.81151784470057	0.28666463014928195	4				NaN	NaN	0	NaN	956	2238	3195
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3197	13.281	NaN	4488.4	30	0	751.71	0.106	+			20132	KEKNEKGAL	9	64	508.7900257809998	1015.5654986287997	2	508.79022216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEKNEKGAL_	ENSG00000143321|ENST00000357325|HDGF;ENST00000465180.5_1_1:156713243-156725382:-|nuORF;ENST00000477306.1_1_1:156713442-156714029:-|nuORF;ENST00000482651.5_1_1:156713243-156717241:-|nuORF;nc|ENSG00000143321|P51858-2|HDGF;nc|ENSG00000143321|P51858-3|HDGF	117.7056744995986	0.022588689529990102	4				NaN	NaN	0	NaN	957	2238	3195
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3198	13.283	NaN	843.18	30	0	148.45	0.106	+			16	AAAAVSSSK	9	35	396.2164373069385	NaN	0	396.2164001464844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AAAAVSSSK_	nc|ENSG00000235927|Q8NBZ9|NEXN-AS1	34.172542307311794	0.30503706118289736	4				NaN	NaN	0	NaN	958	2238	3195
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3199	13.285	NaN	892.38	30	0	191.2	0.106	+			2327	AMLLLRVGTL	10	32	543.8389892578125	NaN	0	543.8389892578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AMLLLRVGTL_	ENST00000281543.5_1_4:44680449-44680617:+|nuORF	14.864876125193954	0.4201028297492154	4				NaN	NaN	0	NaN	959	2238	3195
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3200	13.287	NaN	404.82	30	0	42.759	0.034			+	18375	IQTESTRK	8	30	481.7674560546875	NaN	0	481.7674560546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IQTESTRK_	REV__ENST00000394334.6_1_X:131203666-131205170:+|nuORF	42.396135135203025	1.7418937515398478	4				NaN	NaN	0	NaN	960	2238	3195
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3218	13.324	NaN	84815	30	0	18390	0.128			+	44373	TSLARQPKK	9	71	514.8136915275687	1027.6128301219373	2	515.816650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSLARQPKK_	REV__ENSG00000198798|ENST00000361644|MAGEB3;REV__MAGEB3|p.S144Afs*25|2|0.13|ENSG00000198798|chrX:30236349-30236349|A/-|frameshift_variant	35.61828744233558	0.47037581924408073	4				NaN	NaN	0	NaN	975	2241	3217
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3219	13.326	NaN	4053.7	30	0	674.91	0.106			+	21074	KKLRVELE	8	64	507.8190063066505	NaN	0	507.8190612792969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KKLRVELE_	REV__ENSG00000133392|ENST00000300036|MYH11;REV__nc|ENSG00000133392|P35749-2|MYH11;REV__nc|ENSG00000133392|P35749-3|MYH11;REV__nc|ENSG00000133392|P35749-4|MYH11	66.42927471994793	1.7418937515398478	4				NaN	NaN	0	NaN	976	2241	3217
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3220	13.328	NaN	2308.4	30	0	743.99	0.106				-1	SLDCARRQI	9	34	373.52908530999645	NaN	0	373.5289611816406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SLDC(Carbamidomethyl (C))ARRQI_	tr|U7SIU9|U7SIU9_FUSNUarginaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02241PE=3SV=1	25.57405402267927	0.3484490411150625	4				NaN	NaN	0	NaN	977	2241	3217
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3221	13.33	NaN	1658.3	30	0	302.76	0.106			+	-1	TVPTCPLSLPE	11	32	405.2083740234375	NaN	0	405.2083740234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_TVPTC(Carbamidomethyl (C))PLSLPE_	REV__ENSG00000184911|ENST00000334036|DMRTC1B;REV__ENSG00000269502|ENST00000615063|DMRTC1	23.37791116691581	0.456735970842152	4				NaN	NaN	0	NaN	978	2241	3217
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3222	13.331	NaN	928.3	30	0	299.01	0.106	+			22549	KTRTLKKQ	8	27	501.82476441050966	1001.6349758878193	2	501.8239440917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KTRTLKKQ_	ABL2|p.K836Nfs*34|2|0.23|ENSG00000143322|chr1:179108759-179108759|T/-|frameshift_variant;ENSG00000143322|ENST00000502732|ABL2;nc|ENSG00000143322|P42684-10|ABL2;nc|ENSG00000143322|P42684-2|ABL2;nc|ENSG00000143322|P42684-3|ABL2;nc|ENSG00000143322|P42684-4|ABL2;nc|ENSG00000143322|P42684-5|ABL2;nc|ENSG00000143322|P42684-6|ABL2;nc|ENSG00000143322|P42684-7|ABL2	40.77816245573522	0.6514838689002179	4				NaN	NaN	0	NaN	979	2241	3217
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3223	13.333	NaN	670.33	30	0	253.67	0.106			+	-1	RGCHGAPGP	9	29	454.7107849121094	NaN	0	454.7107849121094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_RGC(Carbamidomethyl (C))HGAPGP_	REV__ENST00000376741.4_1_17:46005558-46005804:+|nuORF	33.51558372728122	0.30835390848773375	4				NaN	NaN	0	NaN	980	2241	3217
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3224	13.335	NaN	983.2	30	0	199.32	0.035	+			19191	IYTSSVLEK	9	40	520.2858746720391	NaN	0	520.2857666015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IYTSSVLEK_	ENSG00000107290|ENST00000224140|SETX;nc|ENSG00000107290|Q7Z333-3|SETX;nc|ENSG00000107290|Q7Z333-4|SETX;SETX|p.F1748Sfs*3|1|0.55|ENSG00000107290|chr9:132326355-132326355|A/-|frameshift_variant;SETX|p.G1134Efs*24|1|0.34|ENSG00000107290|chr9:132328199-132328199|T/-|frameshift_variant;SETX|p.G1252Dfs*9|2|0.2|ENSG00000107290|chr9:132327843-132327843|C/-|frameshift_variant;SETX|p.I2020Nfs*4|1|0.32|ENSG00000107290|chr9:132295919-132295920|-/T|frameshift_variant;SETX|p.N1361Ifs*53|1|0.11|ENSG00000107290|chr9:132327516-132327516|T/-|frameshift_variant;SETX|p.S1600*|1|0.07|ENSG00000107290|chr9:132326800-132326801|-/A|frameshift_variant;SETX|p.T2478Sfs*35|1|0.35|ENSG00000107290|chr9:132264836-132264840|TATGG/-|frameshift_variant	49.44154591367651	0.21054156626303966	4				NaN	NaN	0	NaN	981	2241	3217
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3225	13.336	NaN	430.25	30	0	111.87	0.139	+			29670	PGPRSANQ	8	27	413.7118999006215	825.409246868043	2	413.7130126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_PGPRSANQ_	ENST00000468705.1_1_7:99073929-99077448:+|nuORF	8.822329726475273	0.7821568878176242	4				NaN	NaN	0	NaN	982	2241	3217
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3242	13.373	NaN	1999.3	30	0	598.88	0.214			+	32530	QVRCSVKH	8	44	507.26897833840405	NaN	0	507.2689514160156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_QVRC(Carbamidomethyl (C))SVKH_	REV__ENST00000464316.5_1_3:156870794-156871031:-|nuORF;REV__ENST00000467081.1_1_3:156870794-156876755:-|nuORF	87.75429964447693	1.7418937515398478	4				NaN	NaN	0	NaN	996	2244	3241
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3243	13.377	NaN	1863	30	0	639.93	0.106			+	33946	RSASGLLLGLL	11	38	550.3450927734375	NaN	0	550.3450927734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RSASGLLLGLL_	REV__ENSG00000161682|ENST00000293443|FAM171A2;REV__ENST00000592560.1_1_17:42436899-42441082:-|nuORF	23.52269567125451	0.456735970842152	4				NaN	NaN	0	NaN	997	2244	3241
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3244	13.379	NaN	1362.9	30	0	705.47	0.036			+	-1	QGAKCYMIG	9	21	343.1600341796875	NaN	0	343.1600341796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_QGAKC(Carbamidomethyl (C))YMIG_	REV__ENSG00000197555|ENST00000381232|SIPA1L1;REV__nc|ENSG00000197555|O43166-3|SIPA1L1;REV__nc|ENSG00000197555|O43166|SIPA1L1;REV__SIPA1L1|p.K776*|1|0.32|ENSG00000197555|chr14:71671184-71671185|-/C|frameshift_variant;REV__SIPA1L1|p.N727Kfs*21|1|0.7|ENSG00000197555|chr14:71661386-71661387|-/A|frameshift_variant	20.94693142431847	0.3660861156085067	4				NaN	NaN	0	NaN	998	2244	3241
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3262	13.417	NaN	5904	30	0	444.8	0.214	+			2572	AQDKSVVNK	9	70	494.77471924864557	987.5348855640912	2	494.7746276855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AQDKSVVNK_	ENSG00000003147|ENST00000402384|ICA1;ICA1|p.E307Lfs*26|1|0.05|ENSG00000003147|chr7:8141801-8141802|-/TTTTTCAA|frameshift_variant;ICA1|p.N204Tfs*5|2|0.36|ENSG00000003147|chr7:8158621-8158621|T/-|frameshift_variant;nc|ENSG00000003147|Q05084-2|ICA1;nc|ENSG00000003147|Q05084-3|ICA1	154.1183686248401	0.005909203230691971	4				NaN	NaN	0	NaN	1013	2247	3261
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3263	13.42	NaN	3257	30	0	377.47	0.106	+			36681	SGNDKPLSK	9	56	473.25389285978974	944.4932327863795	2	473.2535400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SGNDKPLSK_	EIF2A|p.I537Sfs*4|1|0.78|ENSG00000144895|chr3:150581723-150581723|A/-|frameshift_variant;ENSG00000144895|ENST00000460851|EIF2A;nc|ENSG00000144895|Q9BY44-2|EIF2A;nc|ENSG00000144895|Q9BY44-3|EIF2A;nc|ENSG00000144895|Q9BY44-4|EIF2A	123.20810148215591	0.019257656778428764	4				NaN	NaN	0	NaN	1014	2247	3261
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3264	13.422	NaN	4672.5	30	0	1451.6	0.038			+	7483	DGDSKDKFGSE	11	51	395.50621345469125	NaN	0	395.5060119628906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DGDSKDKFGSE_	REV__ANKRD11|p.D1104Mfs*214|1|0.28|ENSG00000167522|chr16:89283233-89283233|T/-|frameshift_variant;REV__ANKRD11|p.E1199Rfs*119|1|0.34|ENSG00000167522|chr16:89282948-89282948|T/-|frameshift_variant;REV__ANKRD11|p.I1115Tfs*203|1|0.24|ENSG00000167522|chr16:89283198-89283198|A/-|frameshift_variant;REV__ENSG00000167522|ENST00000301030|ANKRD11;REV__ENST00000330736.9_1_16:89334888-89371640:-|nuORF	39.873155843976775	0.387718248623866	4				NaN	NaN	0	NaN	1015	2247	3261
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3282	13.46	NaN	7282.1	30	0	1210.4	0.214				-1	HRIIKDFMI	9	66	396.89096894072975	NaN	0	396.8909912109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_HRIIKDFM(Oxidation (M))I_	ENSG00000137168|ENST00000373699|PPIL1	36.446750945000026	0.29355505452396785	4				NaN	NaN	0	NaN	1030	2250	3281
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3283	13.463	NaN	4977.4	30	0	840.42	0.106	+			40046	STNKISTAK	9	63	475.2696216299061	948.5246903266122	2	475.2693176269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STNKISTAK_	ENSG00000137033|ENST00000682010|IL33;ENST00000463336.1_1_9:6241694-6242202:+|nuORF;nc|ENSG00000137033|O95760-2|IL33;nc|ENSG00000137033|O95760-3|IL33;nc|ENSG00000137033|O95760-4|IL33	68.62578634547417	0.14673074753754126	4				NaN	NaN	0	NaN	1031	2250	3281
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3284	13.465	NaN	823.57	30	0	177.43	0.033				-1	VTQGCLVN	8	39	445.7217712402344	NaN	0	445.7217712402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_VTQGC(Carbamidomethyl (C))LVN_	nc|ENSG00000111704|Q9H9S0-2|NANOG;nc|ENSG00000176654|Q8N7R0|NANOGP1	30.503639358989545	1.7418937515398478	4				NaN	NaN	0	NaN	1032	2250	3281
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3302	13.503	NaN	570.16	30	0	79.056	0.214			+	21431	KNADFLRR	8	25	510.29034423828125	NaN	0	510.29034423828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KNADFLRR_	REV__ENSG00000105220|ENST00000356487|GPI;REV__ENST00000589504.1_1_19:34856171-34859700:+|nuORF;REV__GPI|p.E382Sfs*20|1|0.52|ENSG00000105220|chr19:34396377-34396377|G/-|frameshift_variant;REV__nc|ENSG00000105220|P06744-2|GPI	18.324413293986947	1.7418937515398478	4				NaN	NaN	0	NaN	1047	2253	3301
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3303	13.506	NaN	1678.8	30	0	293.13	0.041	+			21814	KRDSLRKRSVR	11	39	467.62478685082664	NaN	0	467.625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KRDSLRKRSVR_	ENSG00000065526|ENST00000375759|SPEN;SPEN|p.A2105Lfs*33|1|0.46|ENSG00000065526|chr1:15932548-15932548|G/-|frameshift_variant;SPEN|p.A2251Qfs*102|3|0.29|ENSG00000065526|chr1:15932985-15932985|C/-|frameshift_variant;SPEN|p.G1860Efs*9|1|0.33|ENSG00000065526|chr1:15931816-15931816|G/-|frameshift_variant;SPEN|p.N2053Tfs*11|1|0.43|ENSG00000065526|chr1:15932394-15932394|A/-|frameshift_variant;SPEN|p.P2055Lfs*9|1|0.32|ENSG00000065526|chr1:15932399-15932399|C/-|frameshift_variant	21.780426970141523	0.456735970842152	4				NaN	NaN	0	NaN	1048	2253	3301
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3321	13.544	NaN	580.76	30	0	124.4	0.214	+			33603	RLPPPTPE	8	36	453.75384521484375	NaN	0	453.75384521484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RLPPPTPE_	ENST00000425825.6_1_11:66105015-66105123:-|nuORF	25.450171626174864	1.7418937515398478	4				NaN	NaN	0	NaN	1063	2256	3320
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3322	13.547	NaN	2690.6	30	0	315.5	0.032	+			4021	ATDAAGPGR	9	34	408.2041337682648	814.3937146033296	2	408.20416259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATDAAGPGR_	ENST00000585892.5_2_19:10828777-10828861:+|nuORF	104.74654710444128	0.034358562718640136	4				NaN	NaN	0	NaN	1064	2256	3320
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3340	13.584	NaN	11272	30	0	5052.6	0.214	+			25994	LSKKEIQK	8	62	325.2062683105469	NaN	0	325.2062683105469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSKKEIQK_	ENSG00000065183|ENST00000349139|WDR3;WDR3|p.A919Cfs*2|1|0.38|ENSG00000065183|chr1:117959363-117959364|-/T|frameshift_variant;WDR3|p.T410Ifs*46|1|0.05|ENSG00000065183|chr1:117943526-117943527|-/TAAATGTT|frameshift_variant	73.97473282117947	1.7418937515398478	4				NaN	NaN	0	NaN	1079	2259	3339
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3341	13.588	NaN	5400.3	30	0	1887	0.106	+			38485	SSATLASGPA	10	53	431.2192458333097	860.4239387334194	2	431.21929931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSATLASGPA_	ENSG00000143512|ENST00000343410|HHIPL2	84.9155231211612	0.16018353804806162	4				NaN	NaN	0	NaN	1080	2259	3339
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3342	13.59	NaN	2225.7	30	0	379.1	0.106	+			22834	KVGRDVVQK	9	53	514.8136915275687	1027.6128301219373	2	514.8150024414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KVGRDVVQK_	ENSG00000133392|ENST00000300036|MYH11;nc|ENSG00000133392|P35749-2|MYH11;nc|ENSG00000133392|P35749-3|MYH11;nc|ENSG00000133392|P35749-4|MYH11	58.22992032128504	0.22837015374068087	4				NaN	NaN	0	NaN	1081	2259	3339
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3343	13.592	NaN	1188.5	30	0	207.29	0.106			+	28526	NIFMENTRFIP	11	43	461.23638916015625	NaN	0	461.23638916015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NIFMENTRFIP_	REV__ARFGEF1|p.F1680Lfs*8|1|0.29|ENSG00000066777|chr8:67203171-67203171|A/-|frameshift_variant;REV__ARFGEF1|p.F501Lfs*19|1|0.46|ENSG00000066777|chr8:67271771-67271771|A/-|frameshift_variant;REV__ARFGEF1|p.G612Vfs*2|1|0.33|ENSG00000066777|chr8:67266964-67266964|T/-|frameshift_variant;REV__ARFGEF1|p.K888Rfs*10|1|0.36|ENSG00000066777|chr8:67253485-67253486|TT/-|frameshift_variant;REV__ENSG00000066777|ENST00000262215|ARFGEF1	21.0322348234405	0.456735970842152	4				NaN	NaN	0	NaN	1082	2259	3339
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3344	13.594	NaN	1211.7	30	0	462.22	0.106			+	24800	LILKTQAVF	9	27	344.8853454589844	NaN	0	344.8853454589844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LILKTQAVF_	REV__CASR|p.N118Tfs*6|1|0.17|ENSG00000036828|chr3:122257245-122257245|A/-|frameshift_variant	14.664097394203935	0.38735045005659413	4				NaN	NaN	0	NaN	1083	2259	3339
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3345	13.595	NaN	1382.6	30	0	258.78	0.033			+	32082	QSDKRGPG	8	36	422.71701855993666	843.4194841866733	2	422.71746826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QSDKRGPG_	REV__ENSG00000206530|ENST00000393845|CFAP44	38.80614096846853	0.6637206697844082	4				NaN	NaN	0	NaN	1084	2259	3339
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3346	13.596	NaN	580.36	30	0	83.126	0.14	+			11368	FLHVDPRK	8	34	506.2890930175781	NaN	0	506.2890930175781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FLHVDPRK_	ENSG00000120802|ENST00000556029|TMPO;nc|ENSG00000120802|P42167-2|TMPO	25.450171626174864	1.7418937515398478	4				NaN	NaN	0	NaN	1085	2259	3339
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3364	13.635	NaN	10712	30	0	3044.7	0.214			+	39826	STLKAEKGQ	9	63	481.269390705211	960.524228477222	2	481.26910400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STLKAEKGQ_	REV__ENSG00000221843|ENST00000447166|C2orf16	76.7741389293348	0.11149722112137898	4				NaN	NaN	0	NaN	1100	2262	3363
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3365	13.639	NaN	5219.6	30	0	896.78	0.106	+			34412	RTSSSTQLK	9	73	504.2775487789304	1006.5405446246608	2	504.2777099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RTSSSTQLK_	ENSG00000163138|ENST00000503585|PACRGL;nc|ENSG00000163138|Q8N7B6-2|PACRGL;nc|ENSG00000163138|Q8N7B6-3|PACRGL;nc|ENSG00000163138|Q8N7B6-4|PACRGL	93.5975768576971	0.05472259948179787	4				NaN	NaN	0	NaN	1101	2262	3363
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3366	13.641	NaN	17019	30	0	4142	0.106	+			3130	ASHIASNPK	9	58	462.7483196208476	923.4820863084952	2	462.7482604980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASHIASNPK_	EMC2|p.T249Rfs*6|1|0.17|ENSG00000104412|chr8:108479044-108479044|A/-|frameshift_variant;ENSG00000104412|ENST00000220853|EMC2;ENST00000520294.5_1_8:109476316-109498824:+|nuORF	106.68306549817024	0.032382560583716295	4				NaN	NaN	0	NaN	1102	2262	3363
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3367	13.643	NaN	589.11	30	0	195.57	0.034	+			22501	KTPINRNQ	8	29	485.7749931498974	NaN	0	485.7748718261719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTPINRNQ_	ENSG00000149480|ENST00000278823|MTA2;MTA2|p.A568Qfs*29|1|0.23|ENSG00000149480|chr11:62594402-62594402|T/-|frameshift_variant;MTA2|p.I556Hfs*8|1|0.29|ENSG00000149480|chr11:62594543-62594544|-/C|frameshift_variant;nc|ENSG00000149480|O94776-2|MTA2	29.170058357718403	1.7418937515398478	4				NaN	NaN	0	NaN	1103	2262	3363
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3385	13.68	NaN	5577.6	30	0	591.91	0.214	+			40460	STVRQNVNK	9	65	523.2908393593908	1044.5671257855815	2	523.2913818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STVRQNVNK_	ENSG00000092208|ENST00000308317|GEMIN2;ENST00000418195.1_1_3:42018516-42019344:+|nuORF;ENST00000525430.1_1_14:39583533-39591807:+|nuORF;nc|ENSG00000092208|O14893-2|GEMIN2;nc|ENSG00000092208|O14893-3|GEMIN2;nc|ENSG00000092208|O14893|GEMIN2	107.00750918261382	0.032051501805654005	4				NaN	NaN	0	NaN	1118	2265	3384
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3386	13.684	NaN	1991.2	30	0	444.56	0.106	+			21747	KQNETTAMK	9	55	525.7659224794052	1049.5172920256102	2	525.766845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KQNETTAMK_	ENSG00000136436|ENST00000258947|CALCOCO2;ENST00000509112.1_1_17:46928975-46930413:+|nuORF;nc|ENSG00000136436|Q13137-2|CALCOCO2;nc|ENSG00000136436|Q13137-3|CALCOCO2;nc|ENSG00000136436|Q13137-4|CALCOCO2;nc|ENSG00000136436|Q13137-5|CALCOCO2	78.26377905018397	0.10505600812668463	4				NaN	NaN	0	NaN	1119	2265	3384
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3387	13.686	NaN	4375.7	30	0	1525.9	0.106			+	43653	TISSLKCLPE	10	49	364.19782547780915	1089.5716470336274	3	364.1978454589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TISSLKCLPE_	REV__ENST00000482160.5_1_X:109931866-110002981:-|nuORF	34.172542307311794	0.6007644933930345	4				NaN	NaN	0	NaN	1120	2265	3384
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3388	13.688	NaN	1796.3	30	0	363.86	0.106	+			46096	VDATGWLR	8	37	459.24734225110063	NaN	0	459.24737548828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VDATGWLR_	ANKRD65|p.E389Rfs*7|1|0.37|ENSG00000235098|chr1:1419135-1419135|C/-|frameshift_variant;ANKRD65|p.K336N|1|0.23|ENSG00000235098|chr1:1419292-1419292|C/A|missense_variant;ANKRD65|p.Q327H|1|0.12|ENSG00000235098|chr1:1419319-1419319|C/A|missense_variant;ENSG00000235098|ENST00000537107|ANKRD65	24.20275056022122	1.7418937515398478	4				NaN	NaN	0	NaN	1121	2265	3384
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3389	13.69	NaN	2638.3	30	0	1008.7	0.106	+			44571	TTATATPSK	9	42	439.23485693413477	876.4551609350696	2	439.23486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TTATATPSK_	ENSG00000117983|ENST00000529681|MUC5B;ENSG00000117983|ENST00000529681|MUC5B;ENSG00000117983|ENST00000529681|MUC5B;ENSG00000117983|ENST00000529681|MUC5B;MUC5B|p.E2447Vfs*233|1|0.15|ENSG00000117983|chr11:1244218-1244219|TG/-|frameshift_variant;MUC5B|p.E2929Gfs*98|1|0.13|ENSG00000117983|chr11:1245660-1245661|-/GC|frameshift_variant;MUC5B|p.E2929Gfs*98|1|0.13|ENSG00000117983|chr11:1245660-1245661|-/GC|frameshift_variant;MUC5B|p.P2717Qfs*3|2|0.21|ENSG00000117983|chr11:1245025-1245025|C/-|frameshift_variant;MUC5B|p.P3417Qfs*3|1|0.41|ENSG00000117983|chr11:1247125-1247125|C/-|frameshift_variant;MUC5B|p.P3417Qfs*3|1|0.41|ENSG00000117983|chr11:1247125-1247125|C/-|frameshift_variant;MUC5B|p.S3126Pfs*13|1|0.37|ENSG00000117983|chr11:1246251-1246251|C/-|frameshift_variant;MUC5B|p.S3126Pfs*13|1|0.37|ENSG00000117983|chr11:1246251-1246251|C/-|frameshift_variant;MUC5B|p.S3878Pfs*27|1|0.13|ENSG00000117983|chr11:1248507-1248507|C/-|frameshift_variant;MUC5B|p.S3878Pfs*27|1|0.13|ENSG00000117983|chr11:1248507-1248507|C/-|frameshift_variant;MUC5B|p.S3878Pfs*27|1|0.13|ENSG00000117983|chr11:1248507-1248507|C/-|frameshift_variant;MUC5B|p.S4017Lfs*56|1|0.22|ENSG00000117983|chr11:1248928-1248929|-/C|frameshift_variant;MUC5B|p.S4017Lfs*56|1|0.22|ENSG00000117983|chr11:1248928-1248929|-/C|frameshift_variant;MUC5B|p.S4017Lfs*56|1|0.22|ENSG00000117983|chr11:1248928-1248929|-/C|frameshift_variant;MUC5B|p.T4706Pfs*4|2|0.37|ENSG00000117983|chr11:1250996-1250996|A/-|frameshift_variant;MUC5B|p.T4706Pfs*4|2|0.37|ENSG00000117983|chr11:1250996-1250996|A/-|frameshift_variant;MUC5B|p.T4706Pfs*4|2|0.37|ENSG00000117983|chr11:1250996-1250996|A/-|frameshift_variant;MUC5B|p.T4706Pfs*4|2|0.37|ENSG00000117983|chr11:1250996-1250996|A/-|frameshift_variant	77.31757898189308	0.1091473830098891	4				NaN	NaN	0	NaN	1122	2265	3384
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3390	13.691	NaN	333.56	30	0	55.946	0.035	+			38459	SSAREAHLK	9	25	499.7723388671875	NaN	0	499.7723388671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSAREAHLK_	ENSG00000139428|ENST00000545712|MMAB	31.529811441608018	0.3183796599642538	4				NaN	NaN	0	NaN	1123	2265	3384
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3391	13.692	NaN	4009.4	30	0	1224.4	0.144				-1	VVMRDPNTK	9	36	359.18999801085613	1074.5481646327685	3	359.1900634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_VVM(Oxidation (M))RDPNTK_	chr12:54282662-54282800|482|460.96|0.0|25.46|+|ENST00000677249|HNRNPA1,HNRNPA1;ENSG00000135486|ENST00000340913|HNRNPA1;ENSG00000139675|ENST00000357495|HNRNPA1L2;ENSG00000224578|ENST00000565308|HNRNPA1L3;ENST00000441603.1_1_11:5593122-5593311:-|nuORF;ENST00000452488.1_1_2:41383770-41384067:+|nuORF;ENST00000457695.2_1_X:100110922-100111255:-|nuORF;ENST00000575692.1_1_17:2210089-2210875:+|nuORF;nc|ENSG00000135486|P09651-2|HNRNPA1;nc|ENSG00000135486|P09651-3|HNRNPA1	30.317721548370564	0.5199124245378496	4				NaN	NaN	0	NaN	1124	2265	3384
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3409	13.731	NaN	9485	30	0	5526	0.214	+			41467	SVNQGQNIHRK	11	51	427.56546328973025	1279.6745604693908	3	427.5653076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVNQGQNIHRK_	CFTR|p.E1044Dfs*20|1|0.04|ENSG00000001626|chr7:117610661-117610662|-/TCAAAGAAAAC|frameshift_variant;CFTR|p.G1208Afs*3|1|0.3|ENSG00000001626|chr7:117627672-117627672|G/-|frameshift_variant;CFTR|p.L1258Ffs*7|1|0.26|ENSG00000001626|chr7:117642487-117642488|-/T|frameshift_variant;CFTR|p.S1297Lfs*31|1|0.28|ENSG00000001626|chr7:117652852-117652852|T/-|frameshift_variant;ENSG00000001626|ENST00000003084|CFTR;nc|ENSG00000001626|P13569-2|CFTR	42.33807565288922	0.5259510355945483	4				NaN	NaN	0	NaN	1139	2268	3408
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3410	13.735	NaN	810.08	30	0	147.62	0.106	+			22721	KVASALGIG	9	29	408.25250244140625	NaN	0	408.25250244140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVASALGIG_	ENSG00000174529|ENST00000367167|TMEM81	19.996771675451527	0.3693019437812985	4				NaN	NaN	0	NaN	1140	2268	3408
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3411	13.737	NaN	326.71	30	0	101.06	0.106			+	9851	EPTMKVWGK	9	19	538.2833862304688	NaN	0	538.2833862304688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EPTMKVWGK_	REV__ENSG00000026950|ENST00000289361|BTN3A1;REV__ENSG00000111801|ENST00000244519|BTN3A3;REV__ENST00000082468.11_1_6:26410172-26413917:+|nuORF;REV__nc|ENSG00000026950|O00481-4|BTN3A1;REV__nc|ENSG00000111801|O00478-2|BTN3A3	18.324413293986947	0.3749620627292244	4				NaN	NaN	0	NaN	1141	2268	3408
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3412	13.739	NaN	1461.9	30	0	240.28	0.033	+			42263	TAASTTHR	8	45	422.71701855993666	843.4194841866733	2	422.7162780761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TAASTTHR_	ENSG00000128567|ENST00000378555|PODXL;nc|ENSG00000128567|O00592-2|PODXL	35.61828744233558	0.6843154725607303	4				NaN	NaN	0	NaN	1142	2268	3408
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3430	13.775	NaN	22155	30	0	9153.2	0.214	+			22230	KSYDQVHSGK	10	77	383.527810538898	1147.561602216894	3	383.5278015136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSYDQVHSGK_	ACOX1|p.N501Tfs*6|1|0.47|ENSG00000161533|chr17:75949577-75949577|T/-|frameshift_variant;ENSG00000161533|ENST00000293217|ACOX1;nc|ENSG00000161533|Q15067-3|ACOX1;nc|ENSG00000161533|Q15067|ACOX1	115.23196543181992	0.034063879665207575	4				NaN	NaN	0	NaN	1157	2271	3429
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3431	13.778	NaN	2278.5	30	0	533.41	0.106	+			1740	AHRPLRPLRL	10	45	410.26258634213264	NaN	0	410.2625732421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AHRPLRPLRL_	ENSG00000224940|ENST00000446477|PRRT4	20.030474535948922	0.4201028297492154	4				NaN	NaN	0	NaN	1158	2271	3429
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3432	13.78	NaN	4500.9	30	0	1356.5	0.106				-1	ATAEKCLHK	9	34	353.1867810850585	NaN	0	353.186767578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_ATAEKC(Carbamidomethyl (C))LHK_	ENSG00000180098|ENST00000373830|TRNAU1AP;ENST00000464880.5_1_1:28879622-28887433:+|nuORF;ENST00000480930.5_1_1:28879622-28887666:+|nuORF;ENST00000484775.1_1_1:28887181-28904036:+|nuORF;ENST00000491577.5_1_1:28879622-28887259:+|nuORF;ENST00000495995.5_1_1:28880088-28887666:+|nuORF;TRNAU1AP|p.Q222Sfs*29|1|0.24|ENSG00000180098|chr1:28571305-28571305|C/-|frameshift_variant	34.172542307311794	0.30503706118289736	4				NaN	NaN	0	NaN	1159	2271	3429
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3433	13.782	NaN	1169	30	0	214.92	0.035			+	31398	QKKKQSKK	8	44	501.82476441050966	1001.6349758878193	2	501.82391357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QKKKQSKK_	REV__ENSG00000176208|ENST00000321990|ATAD5	56.72105179125745	0.5342425954139568	4				NaN	NaN	0	NaN	1160	2271	3429
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3451	13.819	NaN	3090.8	30	0	947.78	0.214	+			40119	STPKTTVSSK	10	34	518.2877698469701	NaN	0	518.2874145507812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STPKTTVSSK_	BAZ1A|p.F1348Hfs*8|1|0.02|ENSG00000198604|chr14:34761959-34761960|-/CAAGTGA|frameshift_variant;BAZ1A|p.L1455*|1|0.27|ENSG00000198604|chr14:34758726-34758726|A/-|frameshift_variant;BAZ1A|p.R1409Kfs*11|1|0.36|ENSG00000198604|chr14:34761774-34761774|C/-|frameshift_variant;ENSG00000198604|ENST00000360310|BAZ1A;nc|ENSG00000198604|Q9NRL2-2|BAZ1A	32.75053402867276	0.3926392905881664	4				NaN	NaN	0	NaN	1175	2274	3450
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3452	13.822	NaN	1811.2	30	0	193.39	0.106			+	25124	LLQLPYVVRK	10	46	410.26258634213264	NaN	0	410.7355651855469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LLQLPYVVRK_	REV__TAS1R2|p.W418L|1|0.33|ENSG00000179002|chr1:18854217-18854217|C/A|missense_variant	27.047317107675042	0.41136583337917604	4				NaN	NaN	0	NaN	1176	2274	3450
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3453	13.824	NaN	2819.4	30	0	508.5	0.106	+			20599	KGAGPLRGK	9	49	442.2771734552885	882.539793977377	2	442.2769775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KGAGPLRGK_	ENSG00000067369|ENST00000382044|TP53BP1;ENST00000411772.5_2_15:43699583-43738985:-|nuORF;ENST00000572085.5_1_15:43707600-43785241:-|nuORF;nc|ENSG00000067369|Q12888-3|TP53BP1;nc|ENSG00000067369|Q12888|TP53BP1;TP53BP1|p.D1461Rfs*12|1|0.37|ENSG00000067369|chr15:43420584-43420591|GAGAGTCA/-|frameshift_variant	96.19043198914106	0.047412499214244314	4				NaN	NaN	0	NaN	1177	2274	3450
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3454	13.826	NaN	1289.4	30	0	415.98	0.106	+			6500	AWSGRPCLC	9	35	496.7253036459631	991.4360543587262	2	496.7253723144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AWSGRPCLC_	ENST00000468090.5_1_21:45181890-45182109:+|nuORF	30.503639358989545	0.5181749237905803	4				NaN	NaN	0	NaN	1178	2274	3450
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3455	13.828	NaN	6436.2	30	0	1918	0.106	+			22719	KVAQATKP	8	61	421.75823882325295	841.5019247133059	2	421.7582702636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KVAQATKP_	ENSG00000170748|ENST00000306904|RBMXL2	129.68262048586715	0.2207121622506348	4				NaN	NaN	0	NaN	1179	2274	3450
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3456	13.83	NaN	1091.9	30	0	122.82	0.035	+			10070	ESHWKTVL	8	41	500.267822265625	NaN	0	500.267822265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ESHWKTVL_	ENST00000360772.7_2_3:123339058-123356929:-|nuORF;ENST00000418370.6_1_3:123339058-123339328:-|nuORF	33.51558372728122	1.7418937515398478	4				NaN	NaN	0	NaN	1180	2274	3450
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3474	13.867	NaN	1691.8	30	0	233.35	0.214	+			1589	AGKSTFLKK	9	53	490.2990417480469	NaN	0	490.2990417480469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AGKSTFLKK_	ENSG00000039650|ENST00000322344|PNKP;ENST00000593946.5_1_19:50364507-50370327:-|nuORF;ENST00000594661.5_1_19:50364507-50367546:-|nuORF;ENST00000601816.3_1_19:50365027-50365457:-|nuORF;nc|ENSG00000039650|Q96T60-2|PNKP	46.45678178249821	0.2311111838007999	4				NaN	NaN	0	NaN	1195	2277	3473
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3475	13.871	NaN	514.93	30	0	140.13	0.106			+	32172	QSRSRRVR	8	26	522.8114013671875	NaN	0	522.8114013671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QSRSRRVR_	REV__ENST00000450704.1_1_9:46843972-46844976:+|nuORF	31.529811441608018	1.7418937515398478	4				NaN	NaN	0	NaN	1196	2277	3473
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3476	13.873	NaN	806.65	30	0	120.1	0.106	+			23406	LAALVQGTQ	9	40	450.7606506347656	NaN	0	450.7606506347656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LAALVQGTQ_	ENSG00000261308|ENST00000618634|FIGNL2	53.351449002276354	0.18359631779194618	4				NaN	NaN	0	NaN	1197	2277	3473
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3477	13.875	NaN	1286.2	30	0	339.2	0.106	+			13842	GQTLDLLTAPQ	11	32	386.2131042480469	NaN	0	386.2131042480469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GQTLDLLTAPQ_	ENSG00000160752|ENST00000368356|FDPS;ENST00000470171.5_1_1:155279855-155288545:+|nuORF;nc|ENSG00000160752|P14324-2|FDPS	22.561587123415745	0.456735970842152	4				NaN	NaN	0	NaN	1198	2277	3473
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3478	13.877	NaN	2692.3	30	0	510.63	0.106	+			5887	AVKRKQFEK	9	46	378.5644226074219	NaN	0	378.5644226074219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVKRKQFEK_	ENSG00000125445|ENST00000245539|MRPS7;MRPS7|p.L162Pfs*29|1|0.05|ENSG00000125445|chr17:75263482-75263483|-/C|frameshift_variant	39.252832667884924	0.27938773122138094	4				NaN	NaN	0	NaN	1199	2277	3473
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3479	13.878	NaN	2117	30	0	778.87	0.037	+			51028	YKNIILKAK	9	31	364.23834228515625	NaN	0	364.23834228515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YKNIILKAK_	tr|U7T3J5|U7T3J5_FUSNUEnoyl-[acylcarrierprotein]reductaseIIOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00431PE=4SV=1	25.57405402267927	0.3484490411150625	4				NaN	NaN	0	NaN	1200	2277	3473
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3497	13.916	NaN	40538	30	0	14070	0.214	+			48367	VTHEGSTVEK	10	75	543.774669363095	1085.5347857929899	2	543.775146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTHEGSTVEK_	nc|ENSG00000211675|P0CG04|IGLC1;nc|ENSG00000211677|P0DOY2|IGLC2;nc|ENSG00000211679|P0DOY3|IGLC3;nc|ENSG00000211685|A0M8Q6|IGLC7;nc|ENSG00000222037|P0CF74|IGLC6;nc|ENSG00000254709|B9A064|IGLL5	150.15188659993407	0.008468567113416427	4				NaN	NaN	0	NaN	1215	2280	3496
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3498	13.92	NaN	13368	30	0	1547.5	0.106	+			16359	HEMTKTASA	9	75	488.23147809651135	974.4484032598227	2	488.2315979003906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HEMTKTASA_	ENSG00000060762|ENST00000360961|MPC1	127.46168284122857	0.016682644177004526	4				NaN	NaN	0	NaN	1216	2280	3496
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3499	13.922	NaN	2151.1	30	0	426.51	0.106			+	32747	RAPTVPAR	8	40	434.2612609863281	NaN	0	434.2612609863281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RAPTVPAR_	REV__nc|ENSG00000144485|Q96HZ4-2|HES6	49.44154591367651	1.7418937515398478	4				NaN	NaN	0	NaN	1217	2280	3496
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3500	13.923	NaN	5051.5	30	0	1735.1	0.106				-1	QRKVSYMLA	9	42	371.2032470703125	NaN	0	371.2032470703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_QRKVSYM(Oxidation (M))LA_	ENSG00000183323|ENST00000396496|CCDC125;nc|ENSG00000183323|Q86Z20-2|CCDC125	25.57405402267927	0.3484490411150625	4				NaN	NaN	0	NaN	1218	2280	3496
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3501	13.925	NaN	2082.1	30	0	244.85	0.106	+			39696	STIKSTPSGK	10	56	503.2813297126968	1004.5481064921936	2	503.2818298339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STIKSTPSGK_	ENSG00000130592|ENST00000311604|LSP1;ENST00000485341.5_1_11:1902588-1908790:+|nuORF;nc|ENSG00000130592|P33241-2|LSP1;nc|ENSG00000130592|P33241-3|LSP1	59.93077597824379	0.36646980200755325	4				NaN	NaN	0	NaN	1219	2280	3496
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3502	13.927	NaN	2293.2	30	0	525.28	0.034	+			15759	GVSRSHKGV	9	52	463.76171228475954	925.5088716363191	2	463.76171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GVSRSHKGV_	OLFML2B|p.T394Nfs*93|1|0.33|ENSG00000162745|chr1:161998118-161998119|-/T|frameshift_variant	79.45101966838831	0.09992237243120712	4				NaN	NaN	0	NaN	1220	2280	3496
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3503	13.928	NaN	528.56	30	0	84.587	0.14	+			9775	ENPKEKRP	8	34	499.27454852067933	NaN	0	499.2744140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ENPKEKRP_	ENSG00000173145|ENST00000371361|NOC3L;ENST00000371361.3_1_10:96117968-96121450:-|nuORF;ENST00000461562.1_1_10:96121274-96122595:-|nuORF;ENST00000461562.1_1_10:96121308-96121450:-|nuORF;ENST00000463649.5_1_10:96117838-96122595:-|nuORF;NOC3L|p.K235Nfs*2|1|0.43|ENSG00000173145|chr10:94353049-94353049|T/-|frameshift_variant;NOC3L|p.L425Yfs*3|1|0.14|ENSG00000173145|chr10:94346540-94346540|A/-|frameshift_variant;NOC3L|p.T423Hfs*5|1|0.09|ENSG00000173145|chr10:94346547-94346547|T/-|frameshift_variant	27.882242232435846	1.7418937515398478	4				NaN	NaN	0	NaN	1221	2280	3496
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3521	13.967	NaN	100390	30	0	20848	0.214			+	20421	KETRKVEK	8	104	509.3060237670262	1016.5974946008524	2	509.3061828613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KETRKVEK_	REV__ENST00000276440.11_1_8:25270087-25270417:+|nuORF	113.41158876095287	0.24327961457765637	4				NaN	NaN	0	NaN	1236	2283	3520
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3522	13.97	NaN	3833.8	30	0	1245	0.106			+	38477	SSATEAAKP	9	48	431.2192458333097	860.4239387334194	2	431.2191162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSATEAAKP_	REV__ENSG00000129951|ENST00000520876|PLPPR3;REV__nc|ENSG00000129951|Q6T4P5-2|PLPPR3;REV__nc|ENSG00000129951|Q6T4P5-3|PLPPR3;REV__nc|ENSG00000129951|Q6T4P5-4|PLPPR3	93.19546047674547	0.05585629608842056	4				NaN	NaN	0	NaN	1237	2283	3520
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3523	13.973	NaN	2965.9	30	0	386.07	0.106				-1	VARMVMLGL	9	63	503.2813720703125	NaN	0	503.2813720703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_VARMVM(Oxidation (M))LGL_	ENSG00000204394|ENST00000375663|VARS1	47.91560031466742	0.22105767942158736	4				NaN	NaN	0	NaN	1238	2283	3520
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3524	13.974	NaN	1176.8	30	0	125.14	0.106	+			15	AAAAVSSAK	9	41	388.21912648421886	774.4237000352377	2	388.21893310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AAAAVSSAK_	ENSG00000136371|ENST00000258874|MTHFS	60.97194046774394	0.20551255781574032	4				NaN	NaN	0	NaN	1239	2283	3520
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3525	13.976	NaN	693.1	30	0	109.44	0.106	+			40975	SVGKDSHLK	9	32	485.76922607421875	NaN	0	485.76922607421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVGKDSHLK_	ENSG00000198865|ENST00000361970|CCDC152;nc|ENSG00000198865|Q4G0S7-2|CCDC152	36.446750945000026	0.29355505452396785	4				NaN	NaN	0	NaN	1240	2283	3520
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3526	13.978	NaN	1639.9	30	0	363.69	0.036			+	601	ADPGVLSRLQ	10	42	528.2957130272806	1054.5768731213611	2	528.2958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ADPGVLSRLQ_	REV__ENSG00000167880|ENST00000301607|EVPL;REV__ENST00000587569.5_1_17:74014525-74023279:-|nuORF	52.936696900407355	0.4300801048568001	4				NaN	NaN	0	NaN	1241	2283	3520
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3527	13.979	NaN	354.88	30	0	48.592	0.139			+	-1	VMEIVAAPL	9	23	479.76898193359375	NaN	0	479.76898193359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_VM(Oxidation (M))EIVAAPL_	REV__ENST00000379825.6_2_9:32973498-32973681:-|nuORF	20.481830146152948	0.3676602570045296	4				NaN	NaN	0	NaN	1242	2283	3520
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3545	14.017	NaN	3488.5	30	0	550.09	0.214			+	19972	KEGVMVAAL	9	61	459.26156837571716	NaN	0	459.2615051269531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEGVMVAAL_	REV__ENSG00000198785|ENST00000361820|GRIN3A	63.30626980617807	0.13521764763214936	4				NaN	NaN	0	NaN	1257	2286	3544
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3546	14.021	NaN	3442.2	30	0	510.32	0.106				-1	IICLRAPQK	9	47	366.8863693115791	1097.6372785349372	3	366.9045104980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_IIC(Carbamidomethyl (C))LRAPQK_	sp|P16744|UL08_HCMVAMembraneproteinUL8OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL8PE=1SV=2	25.57405402267927	0.5642445186134241	4				NaN	NaN	0	NaN	1258	2286	3544
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3547	14.023	NaN	420.77	30	0	45.907	0.106	+			16757	HLSLTDFCFS	10	23	585.2686157226562	NaN	0	585.2686157226562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HLSLTDFCFS_	ENSG00000279761|ENST00000623930|OR5D13	39.252832667884924	0.37128895876774715	4				NaN	NaN	0	NaN	1259	2286	3544
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3548	14.025	NaN	1273	30	0	186.03	0.106				-1	 	0	30	347.20480024088477	692.3950475485696	2	347.2049560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1260	2286	3544
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3549	14.027	NaN	665.28	30	0	102.19	0.106	+			4543	ATLCPAFAI	9	32	453.7396545410156	NaN	0	453.7396545410156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATLCPAFAI_	ENST00000155926.8_1_2:12857592-12857697:+|nuORF	26.79610172149135	0.34227917631780574	4				NaN	NaN	0	NaN	1261	2286	3544
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3550	14.028	NaN	998.45	30	0	233.24	0.036			+	13346	GKSYPIRKK	9	35	538.8334350585938	NaN	0	538.8334350585938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GKSYPIRKK_	REV__ENSG00000159184|ENST00000290295|HOXB13	25.57405402267927	0.3484490411150625	4				NaN	NaN	0	NaN	1262	2286	3544
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3551	14.029	NaN	151.86	30	0	47.102	0.139				-1	AKRACRMM	8	11	491.73907470703125	NaN	0	491.73907470703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_AKRACRM(Oxidation (M))M_	HNRNPM|p.E706K|1|0.08|ENSG00000099783|chr19:8488777-8488777|G/A|missense_variant	8.231297230196988	1.7418937515398478	4				NaN	NaN	0	NaN	1263	2286	3544
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3569	14.068	NaN	8604.5	30	0	5852.2	0.214			+	-1	RCEFYSYVK	9	48	417.86607306840534	NaN	0	417.8660583496094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_RC(Carbamidomethyl (C))EFYSYVK_	REV__ENSG00000105835|ENST00000222553|NAMPT;REV__ENST00000393618.5_1_7:105910735-105925330:-|nuORF;REV__ENST00000486949.5_1_7:105912936-105925330:-|nuORF;REV__ENST00000489358.5_1_7:105912543-105925330:-|nuORF;REV__ENST00000489732.1_1_7:105917445-105925330:-|nuORF	23.52269567125451	0.3573684076213556	4				NaN	NaN	0	NaN	1278	2289	3568
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3570	14.072	NaN	14062	30	0	3098.9	0.106	+			38242	SQMKIVHKK	9	62	366.8863693115791	1097.6372785349372	3	366.8864440917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SQMKIVHKK_	ENSG00000189266|ENST00000334351|PNRC2	101.25262130126117	0.03792372629710479	4				NaN	NaN	0	NaN	1279	2289	3568
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3571	14.074	NaN	6892.1	30	0	851.53	0.106	+			39051	SSSPRSINK	9	74	488.26413849846966	974.5137240637393	2	488.2638854980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSSPRSINK_	ENSG00000182173|ENST00000333213|TSEN54	98.58198989935565	0.04066992115528678	4				NaN	NaN	0	NaN	1280	2289	3568
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3572	14.076	NaN	1372.3	30	0	346.79	0.106	+			16031	HATTHNAY	8	39	457.7092540116551	NaN	0	457.7092590332031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HATTHNAY_	ENSG00000143799|ENST00000366794|PARP1;ENST00000490921.5_1_1:226549163-226553858:-|nuORF	24.20275056022122	1.7418937515398478	4				NaN	NaN	0	NaN	1281	2289	3568
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3573	14.077	NaN	1946.1	30	0	269.53	0.106	+			17207	HVGDPSVKK	9	47	483.7719788211208	965.5294047090416	2	483.7715148925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HVGDPSVKK_	ENSG00000057294|ENST00000340811|PKP2;nc|ENSG00000057294|Q99959|PKP2	53.08895987439943	0.27122541748218487	4				NaN	NaN	0	NaN	1282	2289	3568
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3574	14.079	NaN	2459	30	0	1280.7	0.035	+			12135	GAHPLEKSK	9	27	322.85033609961806	965.5291788990542	3	322.85028076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GAHPLEKSK_	ENSG00000184967|ENST00000330579|NOC4L;NOC4L|p.A205Pfs*13|2|0.34|ENSG00000184967|chr12:132147883-132147883|C/-|frameshift_variant;NOC4L|p.A205Rfs*74|1|0.45|ENSG00000184967|chr12:132147882-132147883|-/C|frameshift_variant;NOC4L|p.P381Lfs*103|1|0.35|ENSG00000184967|chr12:132151548-132151548|C/-|frameshift_variant	27.882242232435846	0.5426732730940306	4				NaN	NaN	0	NaN	1283	2289	3568
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3592	14.117	NaN	1912.2	30	0	1079.8	0.214	+			37487	SLKQLLFPA	9	33	339.54156494140625	NaN	0	339.54156494140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLKQLLFPA_	ARHGEF1|p.G859Afs*4|1|0.32|ENSG00000076928|chr19:41906537-41906537|G/-|frameshift_variant;ENSG00000076928|ENST00000354532|ARHGEF1;ENST00000600274.5_1_19:42396347-42410935:+|nuORF;nc|ENSG00000076928|Q92888-2|ARHGEF1;nc|ENSG00000076928|Q92888-3|ARHGEF1	23.04248740728303	0.3589936788096251	4				NaN	NaN	0	NaN	1298	2292	3591
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3593	14.12	NaN	4063.9	30	0	1244.9	0.106			+	34131	RSTGPSLTH	9	58	478.2512773785325	954.488001823865	2	478.25067138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RSTGPSLTH_	REV__ENST00000406438.4_1_17:18226882-18227203:+|nuORF	74.25504064058377	0.12238981753128622	4				NaN	NaN	0	NaN	1299	2292	3591
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3594	14.122	NaN	817.29	30	0	110.86	0.034	+			516	ACNKSITAK	9	48	468.2523094651557	NaN	0	468.25213623046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ACNKSITAK_	ENSG00000116584|ENST00000361247|ARHGEF2;ENST00000465079.1_1_1:155938929-155948853:-|nuORF;ENST00000487755.1_1_1:155938929-155939834:-|nuORF;nc|ENSG00000116584|Q92974-2|ARHGEF2;nc|ENSG00000116584|Q92974-3|ARHGEF2	51.19269402634007	0.19847346126499396	4				NaN	NaN	0	NaN	1300	2292	3591
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3612	14.16	NaN	3070.4	30	0	607.9	0.214	+			14168	GSNPKAHIAAK	11	53	547.310791015625	NaN	0	547.310791015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSNPKAHIAAK_	ENSG00000107862|ENST00000369983|GBF1;GBF1|p.D1798Tfs*11|1|0.46|ENSG00000107862|chr10:102382143-102382143|C/-|frameshift_variant;GBF1|p.S1486Tfs*46|1|0.17|ENSG00000107862|chr10:102377105-102377106|-/C|frameshift_variant;nc|ENSG00000107862|Q92538-1|GBF1;nc|ENSG00000107862|Q92538-2|GBF1;nc|ENSG00000107862|Q92538-3|GBF1	99.01295224348159	0.036182902230656476	4				NaN	NaN	0	NaN	1315	2295	3611
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3613	14.164	NaN	1067.1	30	0	464.29	0.106				-1	TSILQAMSR	9	24	341.51469282499573	1021.5222490751872	3	341.514892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_TSILQAM(Oxidation (M))SR_	ENSG00000138709|ENST00000326639|LARP1B;ENST00000506036.1_1_4:64216694-64216790:+|nuORF;LARP1B|p.M753Cfs*21|1|0.42|ENSG00000138709|chr4:128200607-128200607|A/-|frameshift_variant;nc|ENSG00000138709|Q659C4-2|LARP1B;nc|ENSG00000138709|Q659C4-4|LARP1B;nc|ENSG00000138709|Q659C4-9|LARP1B	39.252832667884924	0.4290233611298554	4				NaN	NaN	0	NaN	1316	2295	3611
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3614	14.166	NaN	855.89	30	0	224.38	0.106			+	9097	EGKGVASTT	9	33	425.21968225124164	848.4248115692833	2	425.2197570800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EGKGVASTT_	REV__ENST00000593209.5_2_17:40340836-40341070:-|nuORF	29.14955571784316	0.5308295550522326	4				NaN	NaN	0	NaN	1317	2295	3611
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3615	14.168	NaN	2334.4	30	0	391.33	0.106			+	7879	DRLNVNPK	8	54	478.26928222080574	954.5240115084115	2	478.2703857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DRLNVNPK_	REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-10|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-13|TTN;REV__nc|ENSG00000155657|Q8WZ42-2|TTN;REV__nc|ENSG00000155657|Q8WZ42-3|TTN;REV__nc|ENSG00000155657|Q8WZ42-4|TTN;REV__nc|ENSG00000155657|Q8WZ42-5|TTN;REV__nc|ENSG00000155657|Q8WZ42-7|TTN;REV__nc|ENSG00000155657|Q8WZ42-8|TTN;REV__nc|ENSG00000155657|Q8WZ42-9|TTN;REV__nc|ENSG00000155657|Q8WZ42|TTN;REV__TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;REV__TTN|p.D21555Ifs*6|1|0.33|ENSG00000155657|chr2:178576659-178576659|G/-|frameshift_variant;REV__TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;REV__TTN|p.G22029Efs*22|2|0.13|ENSG00000155657|chr2:178575125-178575125|T/-|frameshift_variant;REV__TTN|p.I24998Nfs*2|1|0.35|ENSG00000155657|chr2:178566216-178566217|-/T|frameshift_variant;REV__TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;REV__TTN|p.K26626Nfs*34|1|0.34|ENSG00000155657|chr2:178561331-178561331|T/-|frameshift_variant;REV__TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;REV__TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;REV__TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant;REV__TTN|p.P22810Hfs*10|1|0.03|ENSG00000155657|chr2:178572780-178572781|-/AAAT|frameshift_variant;REV__TTN|p.V22573Cfs*4|2|0.31|ENSG00000155657|chr2:178573492-178573492|C/-|frameshift_variant;REV__TTN|p.V27442Cfs*4|1|0.05|ENSG00000155657|chr2:178558107-178558108|-/A|frameshift_variant	60.97194046774394	0.49215940876911696	4				NaN	NaN	0	NaN	1318	2295	3611
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3616	14.169	NaN	1460.5	30	0	483.4	0.106			+	5067	ATSKPPAQ	8	31	400.21893543385977	798.4233179345196	2	400.21917724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATSKPPAQ_	REV__ENSG00000124731|ENST00000244709|TREM1;REV__ENST00000589695.1_1_6:41243865-41248907:-|nuORF;REV__ENST00000589882.1_1_6:41248622-41249060:-|nuORF;REV__nc|ENSG00000124731|Q9NP99-3|TREM1	23.04248740728303	0.7814162927298575	4				NaN	NaN	0	NaN	1319	2295	3611
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3617	14.171	NaN	752.81	30	0	109.99	0.037			+	-1	MVKRATWIA	9	30	364.54022216796875	NaN	0	364.54022216796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_M(Oxidation (M))VKRATWIA_	REV__ENST00000474254.5_1_7:129940682-129945790:+|nuORF	21.9598887501803	0.3626577482100488	4				NaN	NaN	0	NaN	1320	2295	3611
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3618	14.172	NaN	1020.3	30	0	120.12	0.137			+	7459	DFRPKKAGKH	10	35	395.22723388671875	NaN	0	395.22723388671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DFRPKKAGKH_	REV__MCU|p.S310P|1|0.2|ENSG00000156026|chr10:72884332-72884332|T/C|missense_variant	26.063383197487333	0.4145965855542893	4				NaN	NaN	0	NaN	1321	2295	3611
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3636	14.211	NaN	90950	30	0	16926	0.174	+			5404	ATYGKPVHH	9	71	505.2643243517783	1008.5140957703567	2	505.2643737792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATYGKPVHH_	ENSG00000174748|ENST00000307839|RPL15;ENST00000436146.1_1_3:23959450-23960989:+|nuORF;ENST00000490223.1_1_3:23959920-23960989:+|nuORF;nc|ENSG00000174748|P61313-2|RPL15	113.41158876095287	0.025516849225023126	4				NaN	NaN	0	NaN	1336	2298	3635
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3637	14.214	NaN	13304	30	0	1699.1	0.106	+			39069	SSSRAVVVKK	10	67	354.22051307374335	NaN	0	354.2204895019531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSSRAVVVKK_	CON__H-INV:HIT000292931;CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	81.52500206392136	0.09195728362689543	4				NaN	NaN	0	NaN	1337	2298	3635
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3638	14.216	NaN	4111.9	30	0	842.45	0.106	+			34523	RVGTHIRAK	9	47	346.548795690482	1036.624557671646	3	346.5489196777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RVGTHIRAK_	ENSG00000130255|ENST00000347512|RPL36;ENST00000488095.1_1_14:73396322-73396475:-|nuORF	47.95952297671804	0.32689736945648856	4				NaN	NaN	0	NaN	1338	2298	3635
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3639	14.218	NaN	1400.9	30	0	634.15	0.106				-1	STTLVIPLM	9	18	330.8573303222656	NaN	0	330.8573303222656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_STTLVIPLM(Oxidation (M))_	chr10:128113602-128114928|394|14.05|0.83|4.07|-|0|MKI67,MKI67|1	25.57405402267927	0.3484490411150625	4				NaN	NaN	0	NaN	1339	2298	3635
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3640	14.22	NaN	769.8	30	0	200.46	0.106	+			29858	PLENPFKK	8	33	324.8538818359375	NaN	0	324.8538818359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PLENPFKK_	ENSG00000180530|ENST00000318948|NRIP1	35.200714571348534	1.7418937515398478	4				NaN	NaN	0	NaN	1340	2298	3635
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3641	14.221	NaN	2013.1	30	0	671.76	0.106				-1	QDEFMHLL	8	41	524.7448575357023	NaN	0	524.7449951171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_QDEFM(Oxidation (M))HLL_	ANAPC4|p.R419Sfs*21|1|0.18|ENSG00000053900|chr4:25403004-25403005|-/T|frameshift_variant;ENSG00000053900|ENST00000315368|ANAPC4;ENST00000507925.1_1_4:25395483-25396777:+|nuORF;nc|ENSG00000053900|Q9UJX5-2|ANAPC4;nc|ENSG00000053900|Q9UJX5-3|ANAPC4	47.91560031466742	1.7418937515398478	4				NaN	NaN	0	NaN	1341	2298	3635
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3642	14.223	NaN	313.47	30	0	42.869	0.044			+	-1	EHIAARAKC	9	29	528.2738037109375	NaN	0	528.2738037109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_EHIAARAKC(Carbamidomethyl (C))_	REV__ENST00000380548.8_1_9:18770742-18777100:+|nuORF	12.206847966760668	0.39566704307768535	4				NaN	NaN	0	NaN	1342	2298	3635
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3660	14.261	NaN	18984	30	0	2892.5	0.214	+			34518	RVGEVGQSK	9	90	480.2668122359358	958.5190715386716	2	480.2667236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVGEVGQSK_	ENSG00000041880|ENST00000398755|PARP3;ENST00000470601.5_1_3:51977371-51978822:+|nuORF;nc|ENSG00000041880|Q9Y6F1-2|PARP3	133.9934435666947	0.013297982075521412	4				NaN	NaN	0	NaN	1357	2301	3659
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3661	14.264	NaN	4661.8	30	0	1012.7	0.106			+	20346	KERTVTQL	8	61	487.78449091655114	973.5544288999023	2	487.7848205566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KERTVTQL_	REV__ENSG00000179071|ENST00000316398|CCDC89	60.97194046774394	0.49215940876911696	4				NaN	NaN	0	NaN	1358	2301	3659
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3662	14.266	NaN	13296	30	0	2005	0.106	+			35592	SAYRQPVKK	9	69	538.8138667473379	1075.6131805614757	2	538.8148193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAYRQPVKK_	ENST00000473871.1_1_13:37583848-37586479:-|nuORF;nc|ENSG00000102710|Q8NEM7-2|SUPT20H;nc|ENSG00000102710|Q8NEM7-3|SUPT20H	70.39856735676683	0.13906523160059378	4				NaN	NaN	0	NaN	1359	2301	3659
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3663	14.268	NaN	2294.4	30	0	271.46	0.106	+			16237	HEEESGGRSV	10	57	543.7444613941087	NaN	0	543.744384765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HEEESGGRSV_	ENSG00000047410|ENST00000367478|TPR	104.01359247289065	0.008158510534305038	4				NaN	NaN	0	NaN	1360	2301	3659
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3664	14.27	NaN	32213	30	0	11252	0.106	+			35593	SAYRQPVKK	9	76	359.5451339053221	NaN	0	359.5450744628906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SAYRQPVKK_	ENST00000473871.1_1_13:37583848-37586479:-|nuORF;nc|ENSG00000102710|Q8NEM7-2|SUPT20H;nc|ENSG00000102710|Q8NEM7-3|SUPT20H	80.45461616416974	0.0698259577396595	4				NaN	NaN	0	NaN	1361	2301	3659
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3665	14.272	NaN	868.33	30	0	258.59	0.106			+	44422	TSLSALYET	9	35	492.7456359863281	NaN	0	492.7456359863281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TSLSALYET_	REV__ENSG00000137033|ENST00000682010|IL33;REV__nc|ENSG00000137033|O95760-3|IL33	35.61828744233558	0.29773779453147337	4				NaN	NaN	0	NaN	1362	2301	3659
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3666	14.274	NaN	6918.9	30	0	668.06	0.038			+	1129	AELRGQSRGLA	11	53	386.55114285919177	1156.6315991777753	3	386.5513610839844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AELRGQSRGLA_	REV__ENSG00000104805|ENST00000405315|NUCB1;REV__ENST00000485798.5_1_19:49403599-49425678:+|nuORF;REV__ENST00000492367.1_1_19:49422384-49425678:+|nuORF	34.08650109265054	0.6322515996262609	4				NaN	NaN	0	NaN	1363	2301	3659
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3684	14.311	NaN	20435	30	0	2415.6	0.214	+			40251	STSHVSVSK	9	75	466.24558514229335	930.4766173513867	2	466.24560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STSHVSVSK_	ENSG00000215182|ENST00000621226|MUC5AC;ENSG00000215182|ENST00000621226|MUC5AC;MUC5AC|p.R4729Efs*5|1|0.24|ENSG00000215182|chr11:1192325-1192325|C/-|frameshift_variant;MUC5AC|p.R4729Efs*5|1|0.24|ENSG00000215182|chr11:1192325-1192325|C/-|frameshift_variant	134.7655990226056	0.012935733000282069	4				NaN	NaN	0	NaN	1378	2304	3683
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3685	14.315	NaN	1697.4	30	0	404.54	0.106			+	39082	SSSSTKLQ	8	42	419.2192472485966	836.4239415639933	2	419.2192077636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSSSTKLQ_	REV__ENSG00000133858|ENST00000378743|ZFC3H1;REV__nc|ENSG00000133858|O60293-2|ZFC3H1;REV__ZFC3H1|p.E1034Dfs*26|1|0.04|ENSG00000133858|chr12:71632230-71632231|-/AATAAAAATACTG|frameshift_variant;REV__ZFC3H1|p.L1048*|1|0.18|ENSG00000133858|chr12:71632189-71632189|A/-|frameshift_variant;REV__ZFC3H1|p.L1693Ffs*10|1|0.1|ENSG00000133858|chr12:71619380-71619381|-/A|frameshift_variant	51.33545320467046	0.5859736979383976	4				NaN	NaN	0	NaN	1379	2304	3683
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3686	14.317	NaN	3984.5	30	0	715.44	0.106			+	10139	ESRFGKLKLVP	11	59	425.26039118237173	NaN	0	424.9258117675781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ESRFGKLKLVP_	REV__ENSG00000221843|ENST00000447166|C2orf16	28.5767321226876	0.4380616241468488	4				NaN	NaN	0	NaN	1380	2304	3683
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3687	14.319	NaN	9137.7	30	0	5590.5	0.106			+	-1	GALQQLCATAR	11	34	396.87554231262817	1187.6047975380845	3	397.22393798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_GALQQLC(Carbamidomethyl (C))ATAR_	REV__ENST00000484893.1_1_20:25388416-25391788:+|nuORF	29.550750289552195	0.6798279264880025	4				NaN	NaN	0	NaN	1381	2304	3683
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3688	14.32	NaN	1264.6	30	0	255.22	0.106			+	21859	KRKSTKALA	9	39	501.8247695650229	NaN	0	501.82470703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KRKSTKALA_	REV__ENSG00000107290|ENST00000224140|SETX;REV__nc|ENSG00000107290|Q7Z333-3|SETX;REV__nc|ENSG00000107290|Q7Z333-4|SETX;REV__SETX|p.F1748Sfs*3|1|0.55|ENSG00000107290|chr9:132326355-132326355|A/-|frameshift_variant;REV__SETX|p.G1134Efs*24|1|0.34|ENSG00000107290|chr9:132328199-132328199|T/-|frameshift_variant;REV__SETX|p.G1252Dfs*9|2|0.2|ENSG00000107290|chr9:132327843-132327843|C/-|frameshift_variant;REV__SETX|p.I2020Nfs*4|1|0.32|ENSG00000107290|chr9:132295919-132295920|-/T|frameshift_variant;REV__SETX|p.N1361Ifs*53|1|0.11|ENSG00000107290|chr9:132327516-132327516|T/-|frameshift_variant;REV__SETX|p.S1600*|1|0.07|ENSG00000107290|chr9:132326800-132326801|-/A|frameshift_variant;REV__SETX|p.T2478Sfs*35|1|0.35|ENSG00000107290|chr9:132264836-132264840|TATGG/-|frameshift_variant	21.9598887501803	0.3626577482100488	4				NaN	NaN	0	NaN	1382	2304	3683
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3689	14.322	NaN	692.27	30	0	102.1	0.034	+			28949	NSALGLEGSP	10	35	472.738390351413	943.462227769626	2	472.738037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NSALGLEGSP_	ENST00000370626.3_1_10:99446961-99447051:-|nuORF	30.317721548370564	0.6322445173429027	4				NaN	NaN	0	NaN	1383	2304	3683
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3707	14.359	NaN	148850	30	0	42796	0.214	+			39736	STISSNASK	9	86	447.72992889256614	893.4453048519323	2	447.7297058105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STISSNASK_	ENSG00000101166|ENST00000355937|PRELID3B;nc|ENSG00000101166|Q9Y3B1-2|PRELID3B	204.4243087208965	1.4601778531241419E-05	4				NaN	NaN	0	NaN	1398	2307	3706
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3708	14.362	NaN	3713.5	30	0	468.32	0.106			+	15125	GTRESGPGL	9	48	437.2249284251437	872.4353039170874	2	437.22442626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTRESGPGL_	REV__ENST00000303795.8_2_2:68694701-68694746:+|nuORF	56.72105179125745	0.24094814563026265	4				NaN	NaN	0	NaN	1399	2307	3706
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3709	14.364	NaN	3480	30	0	2034.7	0.106			+	-1	QKRCQCPIR	9	32	396.87554231262817	1187.6047975380845	3	396.875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_QKRC(Carbamidomethyl (C))QCPIR_	REV__ENST00000342992.10_3_2:179441293-179441416:-|nuORF	25.57405402267927	0.5642445186134241	4				NaN	NaN	0	NaN	1400	2307	3706
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3710	14.366	NaN	1993	30	0	390.54	0.033	+			14433	GTASPSPTK	9	56	423.2217211960362	844.4288894588724	2	423.2214050292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTASPSPTK_	ENSG00000136636|ENST00000259154|KCTD3;nc|ENSG00000136636|Q9Y597-2|KCTD3;nc|ENSG00000136636|Q9Y597-3|KCTD3	54.776311868738084	0.25715957988447635	4				NaN	NaN	0	NaN	1401	2307	3706
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3728	14.402	NaN	1521	30	0	212.17	0.214	+			1057	AEKRHREEL	9	40	389.8792482466722	NaN	0	389.8793640136719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEKRHREEL_	ENSG00000137497|ENST00000393695|NUMA1;nc|ENSG00000137497|Q14980-2|NUMA1;nc|ENSG00000137497|Q14980-3|NUMA1;nc|ENSG00000137497|Q14980-4|NUMA1;NUMA1|p.K1766Rfs*2|1|0.39|ENSG00000137497|chr11:72007357-72007357|G/-|frameshift_variant;NUMA1|p.L1786Pfs*18|1|0.23|ENSG00000137497|chr11:72007295-72007296|-/G|frameshift_variant	30.317721548370564	0.32449924987115025	4				NaN	NaN	0	NaN	1416	2310	3727
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3729	14.406	NaN	3005.1	30	0	607.34	0.106	+			49172	VVMRDPASK	9	53	509.7710885895348	1017.5276242458697	2	509.77154541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_VVM(Oxidation (M))RDPASK_	ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1	58.22992032128504	0.22837015374068087	4				NaN	NaN	0	NaN	1417	2310	3727
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3730	14.408	NaN	1212	30	0	259.06	0.106	+			21938	KSADPLKSK	9	40	487.2876084366566	972.5606639401133	2	487.28753662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KSADPLKSK_	CAPN7|p.K253Nfs*21|1|0.35|ENSG00000131375|chr3:15227870-15227870|A/-|frameshift_variant;ENSG00000131375|ENST00000253693|CAPN7;ENST00000457023.1_1_3:15247773-15262489:+|nuORF	50.033510581677724	0.3025703251535696	4				NaN	NaN	0	NaN	1418	2310	3727
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3731	14.41	NaN	422.05	30	0	61.824	0.037			+	4089	ATDMSNEKRA	10	17	374.84466552734375	NaN	0	374.84466552734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATDMSNEKRA_	REV__ENSG00000052723|ENST00000060969|SIKE1;REV__nc|ENSG00000052723|Q9BRV8-2|SIKE1	16.006774744331256	0.4201028297492154	4				NaN	NaN	0	NaN	1419	2310	3727
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3749	14.447	NaN	8587.2	30	0	962.86	0.214			+	48033	VSRSDLVV	8	81	437.75331341075105	873.4920738883021	2	437.7529602050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSRSDLVV_	REV__ENSG00000179938|ENST00000567927|GOLGA8J;REV__ENSG00000188626|ENST00000563027|GOLGA8M;REV__ENSG00000249931|ENST00000512626|GOLGA8K;REV__ENSG00000261247|ENST00000569052|GOLGA8T;REV__ENSG00000261794|ENST00000566740|GOLGA8H;REV__nc|ENSG00000261480|H3BSY2-3|GOLGA8M;REV__nc|ENSG00000291004|A6NC78|GOLGA8IP	63.30626980617807	0.4690498839812213	4				NaN	NaN	0	NaN	1434	2313	3748
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3750	14.451	NaN	2421.5	30	0	876.09	0.106	+			38502	SSATTVTSK	9	49	441.2323715456834	NaN	0	441.2323913574219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSATTVTSK_	ENSG00000120733|ENST00000314358|KDM3B;KDM3B|p.P1317Rfs*10|1|0.45|ENSG00000120733|chr5:138420936-138420936|C/-|frameshift_variant;nc|ENSG00000120733|Q7LBC6-2|KDM3B	68.84614121027924	0.11159004992091766	4				NaN	NaN	0	NaN	1435	2313	3748
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3751	14.453	NaN	2845.7	30	0	877.47	0.034			+	30399	PVSEPLPFA	9	44	478.75844046127304	955.5023279893461	2	478.7581481933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PVSEPLPFA_	REV__DENND4B|p.P955Lfs*5|1|0.53|ENSG00000198837|chr1:153934212-153934212|G/-|frameshift_variant;REV__DENND4B|p.R1054Dfs*76|3|0.43|ENSG00000198837|chr1:153933653-153933653|G/-|frameshift_variant;REV__ENSG00000198837|ENST00000361217|DENND4B	33.51558372728122	0.4900267029546261	4				NaN	NaN	0	NaN	1436	2313	3748
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3769	14.49	NaN	5154	30	0	757.97	0.214	+			20418	KETQRTGK	8	67	474.266993390186	946.519433847172	2	474.26678466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KETQRTGK_	ENST00000427167.5_1_7:80548183-80548351:-|nuORF	66.42927471994793	0.4381325844043345	4				NaN	NaN	0	NaN	1451	2316	3768
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3770	14.494	NaN	1369.9	30	0	324.12	0.106			+	13826	GQRHPAPA	8	31	417.22166532840987	NaN	0	417.2217102050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GQRHPAPA_	REV__ENST00000375165.5_1_9:100366979-100380093:-|nuORF;REV__nc|ENSG00000136925|Q5T7W7-2|TSTD2	26.79610172149135	1.7418937515398478	4				NaN	NaN	0	NaN	1452	2316	3768
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3771	14.496	NaN	2492.4	30	0	255.6	0.106				-1	 	0	50	329.21118955160983	656.4078261700197	2	329.2110595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1453	2316	3768
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3772	14.497	NaN	1893.9	30	0	427.37	0.04			+	2018	AKMTIVKI	8	40	452.2886047363281	NaN	0	452.2886047363281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AKMTIVKI_	REV__tr|U7SSQ7|U7SSQ7_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01346PE=4SV=1	15.641811463095205	1.7418937515398478	4				NaN	NaN	0	NaN	1454	2316	3768
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3790	14.535	NaN	6656.1	30	0	1202.7	0.214			+	19721	KDTIRKIQ	8	64	501.3085877680474	1000.6026226028948	2	501.30950927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KDTIRKIQ_	REV__ENSG00000092531|ENST00000249647|SNAP23;REV__nc|ENSG00000092531|O00161-2|SNAP23	90.36981228632155	0.27635063874291205	4				NaN	NaN	0	NaN	1469	2319	3789
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3791	14.539	NaN	2326.5	30	0	307.19	0.106	+			33460	RIQKSISQK	9	52	363.224365234375	NaN	0	363.224365234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RIQKSISQK_	ENSG00000164105|ENST00000296504|SAP30	47.657333605630114	0.2228375344433429	4				NaN	NaN	0	NaN	1470	2319	3789
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3792	14.541	NaN	3365.4	30	0	1029.4	0.106	+			16010	HARGHPLHG	9	60	491.25920867023945	980.5038644072789	2	491.2596435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HARGHPLHG_	ENST00000257215.9_1_11:61488285-61488327:+|nuORF	50.0245360154114	0.3026755932229825	4				NaN	NaN	0	NaN	1471	2319	3789
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3793	14.543	NaN	5012.9	30	0	1551.4	0.032	+			3087	ASGGAAYTK	9	61	413.20855491914625	824.4025569050925	2	413.2094421386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASGGAAYTK_	ENSG00000054118|ENST00000354618|THRAP3;THRAP3|p.T757Nfs*6|1|0.18|ENSG00000054118|chr1:36296730-36296731|-/A|frameshift_variant	101.25262130126117	0.03792372629710479	4				NaN	NaN	0	NaN	1472	2319	3789
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3813	14.578	NaN	2955.4	30	0	928.64	0.214	+			13709	GPSFSQDT	8	39	419.68317192660186	837.3517909200037	2	419.68304443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GPSFSQDT_	ENSG00000185219|ENST00000396077|ZNF445;ZNF445|p.K976Sfs*50|1|0.19|ENSG00000185219|chr3:44446744-44446744|T/-|frameshift_variant	31.954861631926434	0.7126016770032289	4				NaN	NaN	0	NaN	1489	2322	3812
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3814	14.582	NaN	1774	30	0	683.92	0.106	+			37788	SLYKEGHSK	9	37	350.18511962890625	NaN	0	350.18511962890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLYKEGHSK_	CHD4|p.L1404Ffs*9|1|0.42|ENSG00000111642|chr12:6582872-6582873|-/A|frameshift_variant;CHD4|p.L946Tfs*3|1|0.2|ENSG00000111642|chr12:6592505-6592506|-/T|frameshift_variant;CHD4|p.N1569Ifs*9|1|0.44|ENSG00000111642|chr12:6581364-6581364|T/-|frameshift_variant;CHD5|p.P1887Rfs*14|1|0.5|ENSG00000116254|chr1:6106698-6106698|G/-|frameshift_variant;ENSG00000111642|ENST00000544040|CHD4;ENSG00000116254|ENST00000262450|CHD5;nc|ENSG00000111642|Q14839-2|CHD4	25.57405402267927	0.3484490411150625	4				NaN	NaN	0	NaN	1490	2322	3812
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3815	14.584	NaN	1897.6	30	0	353.59	0.106	+			44583	TTCGSSPCR	9	39	484.6996730428549	967.3847931525098	2	484.6998596191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_TTC(Carbamidomethyl (C))GSSPCR_	ENST00000348956.6_1_14:103986846-103986924:-|nuORF	51.19269402634007	0.2889735674168909	4				NaN	NaN	0	NaN	1491	2322	3812
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3816	14.586	NaN	1621.5	30	0	481.64	0.041	+			31916	QQLIQITS	8	52	465.7662799220708	929.5180069109416	2	466.5577697753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QQLIQITS_	DDB1|p.A474T|1|0.14|ENSG00000167986|chr11:61314477-61314477|C/T|missense_variant;ENSG00000167986|ENST00000301764|DDB1	23.04248740728303	0.7814162927298575	4				NaN	NaN	0	NaN	1492	2322	3812
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3834	14.623	NaN	31342	30	0	13692	0.214			+	48052	VSSGQQSI	8	82	403.2061600126832	804.3977670921664	2	403.2063293457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSSGQQSI_	REV__MYO7B|p.S1033I|1|0.17|ENSG00000169994|chr2:127609922-127609922|G/T|missense_variant	122.1759843771914	0.23144439946795717	4				NaN	NaN	0	NaN	1507	2325	3833
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3835	14.627	NaN	8189.8	30	0	2618.3	0.106			+	1225	AEQPASPK	8	60	414.2169873912977	826.4194218493955	2	414.2166748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEQPASPK_	REV__ENSG00000161904|ENST00000293760|LEMD2	58.78195531508484	0.5138399468736706	4				NaN	NaN	0	NaN	1508	2325	3833
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3836	14.629	NaN	6158	30	0	893.72	0.106	+			23132	KVVVSPTKK	9	64	493.3238358658778	984.6331187985556	2	493.32452392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KVVVSPTKK_	ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232323706-232327997:-|nuORF	126.24258497203832	0.01742065577488747	4				NaN	NaN	0	NaN	1509	2325	3833
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3837	14.631	NaN	17640	30	0	7345.7	0.106	+			23133	KVVVSPTKK	9	65	329.2182454241763	984.6329068727289	3	329.5528869628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KVVVSPTKK_	ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232323706-232327997:-|nuORF	60.11826168202944	0.21262886028301267	4				NaN	NaN	0	NaN	1510	2325	3833
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3838	14.632	NaN	5834.7	30	0	770.57	0.106	+			18593	ISQHGQLA	8	54	427.2301723972155	852.445791861231	2	427.22998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ISQHGQLA_	ENSG00000069248|ENST00000261396|NUP133;NUP133|p.F1142Lfs*3|1|0.35|ENSG00000069248|chr1:229441949-229441949|A/-|frameshift_variant	51.33545320467046	0.5859736979383976	4				NaN	NaN	0	NaN	1511	2325	3833
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3839	14.634	NaN	1949.9	30	0	616.68	0.106			+	1531	AGATNKLVV	9	43	436.7638598811238	871.5131668290476	2	436.7638244628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AGATNKLVV_	REV__ENSG00000110422|ENST00000303296|HIPK3;REV__HIPK3|p.C434Afs*13|1|0.33|ENSG00000110422|chr11:33337147-33337147|T/-|frameshift_variant;REV__nc|ENSG00000110422|Q9H422-2|HIPK3	39.252832667884924	0.4290233611298554	4				NaN	NaN	0	NaN	1512	2325	3833
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3840	14.636	NaN	7697.9	30	0	2506.6	0.037			+	-1	ATRLSMIEM	9	46	361.84367626739026	1082.5091994023708	3	362.17791748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Oxidation (M)	_ATRLSM(Oxidation (M))IEM(Oxidation (M))_	REV__THRB|p.A317T|1|0.16|ENSG00000151090|chr3:24127694-24127694|C/T|missense_variant	26.69291269510374	0.5537881896960711	4				NaN	NaN	0	NaN	1513	2325	3833
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3858	14.673	NaN	9171.6	30	0	1055.9	0.214	+			20040	KEKAKETAL	9	66	509.30070083247915	1016.5868487317583	2	509.3006591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEKAKETAL_	ENSG00000169230|ENST00000303204|PRELID1;ENST00000503853.1_1_5:176733373-176733568:+|nuORF;ENST00000567272.1_1_6:126965256-126965442:+|nuORF;nc|ENSG00000169230|Q9Y255-2|PRELID1	78.26377905018397	0.10505600812668463	4				NaN	NaN	0	NaN	1528	2328	3857
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3859	14.676	NaN	2967.3	30	0	774.57	0.106			+	7525	DGRQGAARVA	10	31	334.17948242033947	999.5166178612185	3	334.1796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DGRQGAARVA_	REV__ENST00000405515.5_2_11:67957596-67981223:-|nuORF	22.579656572578934	0.6954366826851017	4				NaN	NaN	0	NaN	1529	2328	3857
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3860	14.679	NaN	2956	30	0	967.17	0.106			+	39595	STGTSGEKAK	10	48	483.24857735166955	964.4826017701391	2	483.2484436035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STGTSGEKAK_	REV__ENSG00000165370|ENST00000651716|GPR101	46.45678178249821	0.4896490706773647	4				NaN	NaN	0	NaN	1530	2328	3857
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3861	14.68	NaN	6183	30	0	2019.9	0.106	+			44837	TTTATATPK	9	52	446.24271225983296	890.4708715864659	2	446.2426452636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TTTATATPK_	ENST00000262126.8_1_18:9136811-9136937:+|nuORF	82.7504851949679	0.08565546331141553	4				NaN	NaN	0	NaN	1531	2328	3857
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3862	14.682	NaN	1307.1	30	0	234.8	0.106			+	38271	SQPAQSAV	8	46	394.20072618426383	NaN	0	394.2007751464844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SQPAQSAV_	REV__ENSG00000185359|ENST00000329138|HGS;REV__nc|ENSG00000185359|O14964-2|HGS	47.657333605630114	1.7418937515398478	4				NaN	NaN	0	NaN	1532	2328	3857
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3863	14.684	NaN	7425	30	0	2067.7	0.038	+			22873	KVLDTPHHSK	10	59	387.8840701388238	1160.6303810166714	3	387.8843994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KVLDTPHHSK_	ENST00000540664.5_1_10:98714714-98714867:+|nuORF	45.908116695636124	0.4947047446361497	4				NaN	NaN	0	NaN	1533	2328	3857
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3864	14.685	NaN	1995.6	30	0	222.48	0.141				-1	RTLNKVAMK	9	38	359.5473616705898	NaN	0	359.2144470214844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_RTLNKVAM(Oxidation (M))K_	COPG1|p.V308I|1|0.46|ENSG00000181789|chr3:129260383-129260383|G/A|missense_variant;ENSG00000158623|ENST00000425248|COPG2;ENSG00000181789|ENST00000314797|COPG1;nc|ENSG00000158623|Q9UBF2-2|COPG2	35.15202426646627	0.3000918603816441	4				NaN	NaN	0	NaN	1534	2328	3857
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3882	14.724	NaN	10524	30	0	2654.2	0.214	+			12410	GEAKPRKTL	9	64	500.30087819717176	NaN	0	500.3008117675781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEAKPRKTL_	ENSG00000099290|ENST00000282633|WASHC2A;ENSG00000172661|ENST00000623400|WASHC2C;nc|ENSG00000099290|Q641Q2-2|WASHC2A;nc|ENSG00000172661|Q9Y4E1-1|WASHC2C;nc|ENSG00000172661|Q9Y4E1-2|WASHC2C;nc|ENSG00000172661|Q9Y4E1-3|WASHC2C;nc|ENSG00000172661|Q9Y4E1-4|WASHC2C;nc|ENSG00000172661|Q9Y4E1-6|WASHC2C	70.8162118820467	0.10318768208603292	4				NaN	NaN	0	NaN	1549	2331	3881
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3883	14.728	NaN	7816.1	30	0	1293.8	0.106	+			15995	HANDDKSSL	9	72	493.7306313442117	985.4467097552234	2	493.7304992675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HANDDKSSL_	ENSG00000179889|ENST00000396410|PDXDC1;nc|ENSG00000179889|Q6P996-3|PDXDC1;nc|ENSG00000179889|Q6P996-4|PDXDC1;nc|ENSG00000179889|Q6P996-5|PDXDC1;PDXDC1|p.P706Tfs*3|1|0.06|ENSG00000179889|chr16:15036023-15036024|-/A|frameshift_variant	81.52500206392136	0.09095445986635249	4				NaN	NaN	0	NaN	1550	2331	3881
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3884	14.73	NaN	3363.8	30	0	628.47	0.106			+	18664	ISVQSAMTKK	10	46	364.8741760253906	NaN	0	364.8741760253906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ISVQSAMTKK_	REV__ENSG00000278845|ENST00000613675|MRPL45;REV__ENST00000425159.7_1_17:45534149-45567581:-|nuORF;REV__nc|ENSG00000278845|Q9BRJ2|MRPL45	19.996771675451527	0.4201028297492154	4				NaN	NaN	0	NaN	1551	2331	3881
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3885	14.731	NaN	1897.4	30	0	790.28	0.106	+			821	AEGASLGPAA	10	45	422.21407651857044	842.4136001039409	2	422.2138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEGASLGPAA_	ENST00000294599.8_1_1:3407490-3411287:-|nuORF;ENST00000356575.8_1_1:3407490-3411251:-|nuORF;ENST00000494257.1_1_1:3407490-3409358:-|nuORF;MEGF6|p.A1440Hfs*78|2|0.41|ENSG00000162591|chr1:3493840-3493840|C/-|frameshift_variant	47.657333605630114	0.47858658696240314	4				NaN	NaN	0	NaN	1552	2331	3881
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3886	14.733	NaN	8954.1	30	0	6803.4	0.106	+			28666	NLRGSPGPK	9	57	463.26399959170504	924.5134462502101	2	463.2643127441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NLRGSPGPK_	COL17A1|p.P1229Rfs*22|1|0.39|ENSG00000065618|chr10:104034701-104034701|G/-|frameshift_variant;COL17A1|p.P847Qfs*219|1|0.17|ENSG00000065618|chr10:104042431-104042431|G/-|frameshift_variant;ENSG00000065618|ENST00000648076|COL17A1;ENST00000480127.1_1_10:105815115-105815723:-|nuORF;nc|ENSG00000065618|Q9UMD9-2|COL17A1	52.936696900407355	0.27249468807391813	4				NaN	NaN	0	NaN	1553	2331	3881
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3887	14.735	NaN	5497.9	30	0	1909.1	0.04			+	23755	LCCWLGMAKWV	11	66	437.21311153212105	1308.6175051965631	3	437.21258544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LCCWLGMAKWV_	REV__ENST00000313863.10_2_17:56283353-56285296:-|nuORF;REV__MKS1|p.F377Lfs*53|1|0.3|ENSG00000011143|chr17:58208139-58208139|A/-|frameshift_variant	29.14955571784316	0.6840361303570832	4				NaN	NaN	0	NaN	1554	2331	3881
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3888	14.736	NaN	1132.6	30	0	156.37	0.139			+	46657	VGDTVIMVK	9	48	481.2746177708591	NaN	0	481.2745361328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VGDTVIMVK_	REV__tr|U7SZH3|U7SZH3_FUSNUAlcoholdehydrogenaseiron-type/glyceroldehydrogenaseGldAdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00834PE=3SV=1	56.72105179125745	0.16330365735109603	4				NaN	NaN	0	NaN	1555	2331	3881
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3905	14.773	NaN	10335	30	0	1766.1	0.214	+			2823	ASAAGVQR	8	55	380.20883833189987	758.4031237305998	2	380.20892333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASAAGVQR_	nc|ENSG00000105993|O75190-3|DNAJB6	147.69337715509954	0.24751049336667502	4				NaN	NaN	0	NaN	1569	2334	3904
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3906	14.777	NaN	2075	30	0	232.23	0.106			+	35045	SADTAVRSSL	10	60	503.76177489605055	NaN	0	503.7617492675781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SADTAVRSSL_	REV__ENSG00000131503|ENST00000360839|ANKHD1;REV__ENST00000475148.1_1_5:139909227-139915158:+|nuORF;REV__nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;REV__nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	58.2462437865262	0.2485996375737153	4				NaN	NaN	0	NaN	1570	2334	3904
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3907	14.779	NaN	2636	30	0	446.73	0.106				-1	QMNKRGFS	8	60	492.2399276951777	982.4653024571554	2	492.2398376464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_QM(Oxidation (M))NKRGFS_	ENSG00000007952|ENST00000372966|NOX1;nc|ENSG00000007952|Q9Y5S8-3|NOX1	47.91560031466742	0.6071945918984287	4				NaN	NaN	0	NaN	1571	2334	3904
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3908	14.781	NaN	4783.7	30	0	953.27	0.106			+	25579	LQFGLVAQKL	10	58	372.89585044917004	NaN	0	372.89581298828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LQFGLVAQKL_	REV__ENSG00000160294|ENST00000291688|MCM3AP;REV__ENST00000467026.5_1_21:47655184-47679082:-|nuORF;REV__ENST00000486937.5_1_21:47655184-47666418:-|nuORF;REV__ENST00000496607.5_1_21:47655184-47686088:-|nuORF;REV__nc|ENSG00000160294|O60318-2|MCM3AP	47.95952297671804	0.31850267256932663	4				NaN	NaN	0	NaN	1572	2334	3904
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3909	14.783	NaN	35978	30	0	9129.2	0.106	+			49341	VVSKSGSLK	9	70	452.7765342427832	903.5385155523664	2	452.7766418457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVSKSGSLK_	ENSG00000166197|ENST00000605788|NOLC1;ENST00000477977.1_1_10:103920762-103923575:+|nuORF;nc|ENSG00000166197|Q14978-2|NOLC1;nc|ENSG00000166197|Q14978-3|NOLC1	96.0336014099291	0.047854655524928534	4				NaN	NaN	0	NaN	1573	2334	3904
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3910	14.785	NaN	695.45	30	0	235.36	0.034	+			7606	DKATGKISK	9	30	474.279296875	NaN	0	474.279296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DKATGKISK_	ENSG00000183207|ENST00000595090|RUVBL2;ENST00000594017.5_1_19:49497156-49513425:+|nuORF;ENST00000596247.5_1_19:49507512-49519096:+|nuORF;nc|ENSG00000183207|Q9Y230-2|RUVBL2	15.641811463095205	0.38404136392510424	4				NaN	NaN	0	NaN	1574	2334	3904
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3911	14.785	NaN	11720	30	0	4549.8	0.143	+			14525	GTDLYRGEKM	10	52	390.52635047898434	1168.557222037153	3	390.52685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GTDLYRGEKM_	ENSG00000138433|ENST00000342016|CIR1	32.81241826257853	0.6118718159329168	4				NaN	NaN	0	NaN	1575	2334	3904
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3929	14.823	NaN	13966	30	0	2163.6	0.214	+			45383	TVTKPVGGDK	10	76	501.2848133379301	1000.5550737426602	2	501.2848205566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVTKPVGGDK_	ENSG00000089009|ENST00000202773|RPL6;ENST00000445338.1_1_10:13633913-13634195:-|nuORF;ENST00000454924.1_1_7:63602236-63602701:-|nuORF;RPL6|p.K237Rfs*4|1|0.04|ENSG00000089009|chr12:112405856-112405857|TT/-|frameshift_variant	96.0336014099291	0.09653029772959643	4				NaN	NaN	0	NaN	1590	2337	3928
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3930	14.827	NaN	17852	30	0	2328	0.106	+			13996	GSDRDTLAK	9	63	481.74850252871113	961.4824521242223	2	481.7484130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSDRDTLAK_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	70.8162118820467	0.13725933411854815	4				NaN	NaN	0	NaN	1591	2337	3928
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3931	14.829	NaN	3062.9	30	0	1521.5	0.106			+	19747	KDVLARSH	8	51	463.26399959170504	924.5134462502101	2	463.2947998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KDVLARSH_	REV__ENSG00000166348|ENST00000687698|USP54;REV__ENST00000498143.5_1_10:75279553-75335416:-|nuORF;REV__nc|ENSG00000166348|Q70EL1-6|USP54;REV__nc|ENSG00000166348|Q70EL1-7|USP54	62.107414245175825	0.4809183816468817	4				NaN	NaN	0	NaN	1592	2337	3928
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3932	14.83	NaN	6097.7	30	0	511.74	0.106	+			496	ACCLMVAWRVS	11	70	456.87969551210745	1367.6172571365223	3	456.87957763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C),Oxidation (M)	_AC(Carbamidomethyl (C))C(Carbamidomethyl (C))LM(Oxidation (M))VAWRVS_	ENSG00000123843|ENST00000367078|C4BPB;ENST00000492730.1_1_1:207262876-207265203:+|nuORF;nc|ENSG00000123843|P20851-2|C4BPB	46.45678178249821	0.46959456050452836	4				NaN	NaN	0	NaN	1593	2337	3928
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3933	14.832	NaN	1044.2	30	0	221.58	0.106	+			45803	VAHVSREA	8	40	434.7350890944721	NaN	0	434.7349853515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VAHVSREA_	ENSG00000115649|ENST00000360507|CNPPD1	31.954861631926434	1.7418937515398478	4				NaN	NaN	0	NaN	1594	2337	3928
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3934	14.834	NaN	22143	30	0	8957.3	0.039	+			42503	TANSTTARRLH	11	74	409.8906589469518	1226.6501474410554	3	410.22509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TANSTTARRLH_	ENST00000373381.8_2_1:34066505-34068064:-|nuORF	33.03940026070387	0.6432348334061824	4				NaN	NaN	0	NaN	1595	2337	3928
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3935	14.835	NaN	530.49	30	0	80.827	0.142			+	33875	RRLRQHTQ	8	34	365.54888916015625	NaN	0	365.54888916015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RRLRQHTQ_	REV__ERRFI1|p.R244Q|3|0.32|ENSG00000116285|chr1:8013868-8013868|C/T|missense_variant	19.1035232394073	1.7418937515398478	4				NaN	NaN	0	NaN	1596	2337	3928
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3953	14.872	NaN	6085.9	30	0	693.53	0.214	+			16095	HDERQDSIN	9	64	557.2498206840527	1112.4850884349053	2	557.2498779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HDERQDSIN_	ENSG00000153147|ENST00000283131|SMARCA5	66.42927471994793	0.16001998865088202	4				NaN	NaN	0	NaN	1611	2340	3952
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3954	14.876	NaN	7513.9	30	0	2202.5	0.106	+			40023	STMTSGQAR	9	57	469.72157913213283	937.4286053310657	2	469.7213439941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STMTSGQAR_	ENSG00000106609|ENST00000341567|TMEM248;nc|ENSG00000106609|Q9NWD8-2|TMEM248	115.49404669440601	0.023927554121326553	4				NaN	NaN	0	NaN	1612	2340	3952
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3955	14.878	NaN	3864.2	30	0	406.82	0.106			+	9963	EREQQKRLE	9	57	405.88600676587055	1214.6361908978117	3	405.8860168457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EREQQKRLE_	REV__ENSG00000154310|ENST00000436636|TNIK;REV__nc|ENSG00000154310|Q9UKE5-2|TNIK;REV__nc|ENSG00000154310|Q9UKE5-3|TNIK;REV__nc|ENSG00000154310|Q9UKE5-4|TNIK;REV__nc|ENSG00000154310|Q9UKE5-5|TNIK;REV__nc|ENSG00000154310|Q9UKE5-6|TNIK;REV__nc|ENSG00000154310|Q9UKE5-7|TNIK;REV__nc|ENSG00000154310|Q9UKE5-8|TNIK;REV__TNIK|p.E1253Kfs*13|1|0.04|ENSG00000154310|chr3:171066678-171066678|C/-|frameshift_variant;REV__TNIK|p.F1336Lfs*15|1|0.15|ENSG00000154310|chr3:171063956-171063956|A/-|frameshift_variant;REV__TNIK|p.S560Ifs*2|1|0.05|ENSG00000154310|chr3:171128809-171128810|-/T|frameshift_variant;REV__TNIK|p.V1263Cfs*3|1|0.42|ENSG00000154310|chr3:171066648-171066648|C/-|frameshift_variant	54.722347961057174	0.257609425301511	4				NaN	NaN	0	NaN	1613	2340	3952
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3956	14.88	NaN	1677.9	30	0	222.6	0.106	+			24713	LHKRNHTQ	8	47	517.285317828885	1032.55608272457	2	517.2861938476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LHKRNHTQ_	ENST00000467807.5_1_19:56884531-56888546:+|nuORF;ENST00000468396.5_1_19:56884531-56888546:+|nuORF;nc|ENSG00000290720|Q5EBM4-2|ZNF542P;nc|ENSG00000290720|Q5EBM4|ZNF542P	53.351449002276354	0.5676011784961348	4				NaN	NaN	0	NaN	1614	2340	3952
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3957	14.881	NaN	2198.3	30	0	232.3	0.106				-1	QREMLKGSAH	10	38	391.53265380859375	NaN	0	391.53265380859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_QREM(Oxidation (M))LKGSAH_	ZMYM5|p.R260_K261insEML|1|0.04|ENSG00000132950|chr13:19838791-19838792|-/CAACATTTC|inframe_insertion	20.83715455343099	0.4201028297492154	4				NaN	NaN	0	NaN	1615	2340	3952
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3958	14.883	NaN	868.73	30	0	397.44	0.036			+	-1	KSFTTLPML	9	27	351.8608093261719	NaN	0	351.8608093261719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_KSFTTLPM(Oxidation (M))L_	REV__ENSG00000138074|ENST00000310574|SLC5A6;REV__ENST00000461757.1_1_2:27424532-27424700:-|nuORF	16.71738777980365	0.38040106172814914	4				NaN	NaN	0	NaN	1616	2340	3952
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3976	14.92	NaN	5936.7	30	0	594.94	0.214			+	27	AAAKEAKKP	9	60	457.27689192997343	912.5392309267469	2	457.27716064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAAKEAKKP_	REV__AFF4|p.R689Gfs*28|1|0.29|ENSG00000072364|chr5:132896566-132896566|A/-|frameshift_variant;REV__ENSG00000072364|ENST00000265343|AFF4;REV__nc|ENSG00000072364|Q9UHB7-2|AFF4	82.24051045832904	0.08786059719216216	4				NaN	NaN	0	NaN	1631	2343	3975
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3977	14.924	NaN	1596.9	30	0	479.27	0.106	+			12418	GEAPAPPPL	9	45	424.7275695800781	NaN	0	424.7275695800781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEAPAPPPL_	ENSG00000174498|ENST00000327987|IGDCC3;IGDCC3|p.P723Rfs*37|2|0.31|ENSG00000174498|chr15:65329427-65329427|G/-|frameshift_variant	71.37791200682192	0.10092813839350395	4				NaN	NaN	0	NaN	1632	2343	3975
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3978	14.926	NaN	4719.1	30	0	448.11	0.106	+			10089	ESKREVAL	8	66	466.2640231825062	930.5134934318124	2	466.2638854980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ESKREVAL_	ENSG00000148357|ENST00000683500|HMCN2;HMCN2|p.P4784Qfs*22|1|0.32|ENSG00000148357|chr9:130430363-130430363|C/-|frameshift_variant;nc|ENSG00000148357|Q8NDA2-1|HMCN2;nc|ENSG00000148357|Q8NDA2-4|HMCN2	84.9155231211612	0.2928622555056503	4				NaN	NaN	0	NaN	1633	2343	3975
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3979	14.928	NaN	8062.8	30	0	2840.9	0.106	+			20988	KKFSKILSK	9	54	360.2374700201181	1077.6905806605544	3	360.2377014160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KKFSKILSK_	ENST00000269214.9_1_18:19155183-19155270:-|nuORF	37.81151784470057	0.4459294069877048	4				NaN	NaN	0	NaN	1634	2343	3975
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3980	14.929	NaN	2185.7	30	0	390.82	0.106	+			48864	VVDAAARPS	9	54	443.2431634355907	884.4717739379814	2	443.2436828613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVDAAARPS_	ENST00000429403.5_1_3:5164021-5170186:+|nuORF;ENST00000444332.1_1_3:5164021-5212295:+|nuORF;ENST00000455168.5_1_3:5164021-5220395:+|nuORF	31.529811441608018	0.5085848003137583	4				NaN	NaN	0	NaN	1635	2343	3975
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3981	14.931	NaN	1099.3	30	0	123.53	0.034	+			8494	EASSSKTVP	9	48	453.23193359375	NaN	0	453.23193359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EASSSKTVP_	ENSG00000061936|ENST00000261674|SFSWAP;ENST00000538548.5_1_12:132198725-132271134:+|nuORF;nc|ENSG00000061936|Q12872-2|SFSWAP;SFSWAP|p.H761Afs*23|1|0.09|ENSG00000061936|chr12:131778196-131778197|-/A|frameshift_variant;SFSWAP|p.K760Sfs*72|2|0.23|ENSG00000061936|chr12:131778197-131778197|A/-|frameshift_variant	39.252832667884924	0.27938773122138094	4				NaN	NaN	0	NaN	1636	2343	3975
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3982	14.932	NaN	1119	30	0	172.96	0.143	+			21605	KPLLESVPYE	10	31	392.2149658203125	NaN	0	392.2149658203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KPLLESVPYE_	ENSG00000162869|ENST00000294952|PPP1R21;nc|ENSG00000162869|Q6ZMI0-2|PPP1R21;nc|ENSG00000162869|Q6ZMI0-3|PPP1R21;PPP1R21|p.Y693Mfs*21|1|0.22|ENSG00000162869|chr2:48507373-48507373|T/-|frameshift_variant	26.063383197487333	0.4145965855542893	4				NaN	NaN	0	NaN	1637	2343	3975
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4000	14.97	NaN	12295	30	0	2006.9	0.214	+			30523	QAHSVLKKT	9	79	506.30085202423095	1010.5871511152619	2	506.3009338378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QAHSVLKKT_	ENSG00000118482|ENST00000262043|PHF3;nc|ENSG00000118482|Q92576-2|PHF3;PHF3|p.F1399Lfs*30|1|0.31|ENSG00000118482|chr6:63711780-63711780|T/-|frameshift_variant;PHF3|p.I876Yfs*26|1|0.08|ENSG00000118482|chr6:63694705-63694705|A/-|frameshift_variant;PHF3|p.K1984Vfs*10|2|0.05|ENSG00000118482|chr6:63713536-63713537|-/TGTGAATCACTAT|frameshift_variant;PHF3|p.N1400*|1|0.17|ENSG00000118482|chr6:63711779-63711780|-/T|frameshift_variant;PHF3|p.N993Tfs*9|1|0.33|ENSG00000118482|chr6:63698597-63698597|A/-|frameshift_variant;PHF3|p.R971Sfs*6|1|0.27|ENSG00000118482|chr6:63698526-63698527|-/T|frameshift_variant;PHF3|p.V1137*|1|0.32|ENSG00000118482|chr6:63706063-63706063|A/-|frameshift_variant	96.0336014099291	0.047854655524928534	4				NaN	NaN	0	NaN	1652	2346	3999
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4001	14.974	NaN	13514	30	0	2611.4	0.106			+	9966	ERERREKEI	9	63	415.5616242109648	1243.6630432330944	3	415.561767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ERERREKEI_	REV__ENSG00000119707|ENST00000261973|RBM25;REV__ENST00000532683.5_1_14:73569902-73577964:+|nuORF	45.97224482568171	0.3502073465782774	4				NaN	NaN	0	NaN	1653	2346	3999
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4002	14.976	NaN	3427.5	30	0	254.24	0.106	+			8406	EAPLSLAEGWQ	11	60	400.8669738769531	NaN	0	400.8669738769531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EAPLSLAEGWQ_	ENSG00000197858|ENST00000355091|GPAA1;ENST00000529638.1_1_8:145140125-145141025:+|nuORF;ENST00000530796.1_1_8:145140395-145141025:+|nuORF;nc|ENSG00000197858|O43292-2|GPAA1	39.873155843976775	0.387718248623866	4				NaN	NaN	0	NaN	1654	2346	3999
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4003	14.978	NaN	4816	30	0	863.23	0.106	+			34236	RTGKPIAVK	9	59	485.31362972659866	968.6127065199973	2	485.3136291503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RTGKPIAVK_	CSDE1|p.D560Gfs*6|1|0.3|ENSG00000009307|chr1:114725295-114725296|-/C|frameshift_variant;CSDE1|p.V523Wfs*4|1|0.28|ENSG00000009307|chr1:114726284-114726284|C/-|frameshift_variant;ENSG00000009307|ENST00000358528|CSDE1;nc|ENSG00000009307|O75534-2|CSDE1;nc|ENSG00000009307|O75534-3|CSDE1;nc|ENSG00000009307|O75534-4|CSDE1	65.15724298150197	0.17062369902793603	4				NaN	NaN	0	NaN	1655	2346	3999
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4004	14.979	NaN	928.84	30	0	186.13	0.106	+			4401	ATHVGSVEK	9	41	464.2481689453125	NaN	0	464.2481689453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATHVGSVEK_	ENSG00000080986|ENST00000261597|NDC80	44.377184641726394	0.24544280798894275	4				NaN	NaN	0	NaN	1656	2346	3999
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4005	14.981	NaN	45030	30	0	4112.4	0.037				-1	 	0	89	585.7596436504608	1169.5047343677215	2	585.7608642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1657	2346	3999
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4006	14.982	NaN	4189.8	30	0	1064.8	0.141	+			34914	SAAEPVGSK	9	53	423.2218924302499	844.4292319272998	2	423.2216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SAAEPVGSK_	ENSG00000161267|ENST00000392379|BDH1;ENST00000495285.1_1_3:197257612-197260782:-|nuORF	68.84614121027924	0.14577793175421136	4				NaN	NaN	0	NaN	1658	2346	3999
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4024	15.021	NaN	28135	30	0	4481.5	0.215	+			39377	STDKQTCLK	9	81	512.2602456698811	1022.5059384065622	2	512.2605590820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STDKQTCLK_	ENSG00000198788|ENST00000675028|MUC2;nc|ENSG00000198788|Q02817|MUC2	169.6522961985778	0.0028262690464207238	4				NaN	NaN	0	NaN	1673	2349	4023
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4025	15.025	NaN	4507.8	30	0	963.57	0.106	+			16643	HHRFIYRHKKH	11	58	520.293357776952	1557.8582439310558	3	520.2938232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HHRFIYRHKKH_	ENST00000471102.1_1_10:46281927-46282167:+|nuORF	9.21180021271957	0.8273556446088389	4				NaN	NaN	0	NaN	1674	2349	4023
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4026	15.027	NaN	4052.9	30	0	1363	0.106			+	3705	ATAALNLGQ	9	55	429.73770565108686	857.4608583689737	2	429.7373962402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATAALNLGQ_	REV__ENSG00000165476|ENST00000373758|REEP3;REV__nc|ENSG00000165476|Q6NUK4-2|REEP3	68.78682469695295	0.14603441672067394	4				NaN	NaN	0	NaN	1675	2349	4023
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4027	15.029	NaN	694.22	30	0	58.544	0.106			+	32689	RAGGSGRQAQ	10	45	494.25872802734375	NaN	0	494.25872802734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RAGGSGRQAQ_	REV__ENSG00000267221|ENST00000587304|C17orf113	37.81151784470057	0.3760215235790741	4				NaN	NaN	0	NaN	1676	2349	4023
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4028	15.031	NaN	1171.5	30	0	116.28	0.106	+			16704	HKYSSSPL	8	51	459.7360534667969	NaN	0	459.7360534667969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HKYSSSPL_	ENSG00000130714|ENST00000402686|POMT1;nc|ENSG00000130714|Q9Y6A1-3|POMT1;nc|ENSG00000130714|Q9Y6A1-4|POMT1;nc|ENSG00000130714|Q9Y6A1|POMT1	40.5726180659479	1.7418937515398478	4				NaN	NaN	0	NaN	1677	2349	4023
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4029	15.032	NaN	1967.5	30	0	159.26	0.033	+			40977	SVGKGAVHD	9	53	435.2272033691406	NaN	0	435.2272033691406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVGKGAVHD_	ENSG00000161634|ENST00000293371|DCD	30.317721548370564	0.32449924987115025	4				NaN	NaN	0	NaN	1678	2349	4023
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4030	15.033	NaN	1965.6	30	0	415.35	0.138			+	32122	QSKPSKKP	8	52	450.26897601887606	898.5233991045521	2	450.2685852050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QSKPSKKP_	REV__ENSG00000151276|ENST00000402939|MAGI1;REV__nc|ENSG00000151276|Q96QZ7-3|MAGI1;REV__nc|ENSG00000151276|Q96QZ7-4|MAGI1;REV__nc|ENSG00000151276|Q96QZ7-5|MAGI1;REV__nc|ENSG00000151276|Q96QZ7-6|MAGI1;REV__nc|ENSG00000151276|Q96QZ7-7|MAGI1;REV__nc|ENSG00000151276|Q96QZ7|MAGI1	101.60071028292904	0.24979566554663588	4				NaN	NaN	0	NaN	1679	2349	4023
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4048	15.072	NaN	9882.1	30	0	1535.4	0.214			+	31562	QLNRPDRRQ	9	77	591.8266465731797	1181.6387402131593	2	591.8274536132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QLNRPDRRQ_	REV__ENSG00000221923|ENST00000422689|ZNF880;REV__nc|ENSG00000221923|Q6PDB4-2|ZNF880	66.96192283764107	0.15557981141143568	4				NaN	NaN	0	NaN	1694	2352	4047
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4049	15.076	NaN	6657.6	30	0	2654.1	0.106			+	21026	KKKEEVQELIQ	11	56	457.93449943679667	1370.78166891059	3	457.6000671386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KKKEEVQELIQ_	REV__ENSG00000149488|ENST00000358864|TMC2;REV__nc|ENSG00000149488|Q8TDI7-3|TMC2;REV__TMC2|p.P719Tfs*4|1|0.36|ENSG00000149488|chr20:2617281-2617282|-/C|frameshift_variant	36.31764250033197	0.6083289427130232	4				NaN	NaN	0	NaN	1695	2352	4047
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4050	15.078	NaN	901.1	30	0	118.04	0.106			+	9865	EQERAVLQK	9	46	550.80712890625	NaN	0	550.80712890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EQERAVLQK_	REV__ENSG00000125844|ENST00000377813|RRBP1;REV__nc|ENSG00000125844|Q9P2E9-3|RRBP1;REV__RRBP1|p.A628Gfs*69|1|0.35|ENSG00000125844|chr20:17621915-17621916|-/T|frameshift_variant	36.446750945000026	0.29355505452396785	4				NaN	NaN	0	NaN	1696	2352	4047
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4051	15.08	NaN	29056	30	0	8965.9	0.106	+			20726	KGSSNSYAIKK	11	99	394.8872810544165	1181.6400137634496	3	394.8873596191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KGSSNSYAIKK_	ENSG00000083845|ENST00000196551|RPS5	152.69292282917763	6.602793133983423E-05	4				NaN	NaN	0	NaN	1697	2352	4047
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4052	15.081	NaN	613.33	30	0	75.672	0.106			+	31570	QLQEFAAAR	9	39	517.276611328125	NaN	0	517.276611328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QLQEFAAAR_	REV__ENSG00000154174|ENST00000284320|TOMM70	58.22992032128504	0.15686832049467786	4				NaN	NaN	0	NaN	1698	2352	4047
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4053	15.083	NaN	1329.4	30	0	146.49	0.033			+	1519	AGALAGGYAS	10	51	419.21056246566803	NaN	0	419.2104797363281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AGALAGGYAS_	REV__ENST00000472734.1_1_1:211433019-211434404:+|nuORF	63.30626980617807	0.2072786894693966	4				NaN	NaN	0	NaN	1699	2352	4047
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4054	15.084	NaN	4903.6	30	0	1342.1	0.145	+			15819	GVYLTKKEQKK	11	61	441.2658832586625	1320.7758203761875	3	441.2657470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GVYLTKKEQKK_	ENSG00000117360|ENST00000324862|PRPF3;ENST00000467329.5_1_1:150300781-150316915:+|nuORF;ENST00000493553.1_1_1:150315777-150316738:+|nuORF;ENST00000519029.1_1_8:67896909-67897419:-|nuORF	35.17822180527639	0.6208003396870814	4				NaN	NaN	0	NaN	1700	2352	4047
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4072	15.123	NaN	60916	30	0	13695	0.214	+			44345	TSGPVTTSK	9	88	439.2350275309269	876.4555021286538	2	439.23468017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSGPVTTSK_	ENSG00000197386|ENST00000355072|HTT;ENST00000510626.5_1_4:3131970-3189635:+|nuORF;HTT|p.H2238Ffs*6|1|0.28|ENSG00000197386|chr4:3212643-3212644|CA/-|frameshift_variant;HTT|p.P2413Hfs*44|1|0.6|ENSG00000197386|chr4:3217944-3217944|C/-|frameshift_variant	132.757866228626	0.013877640931359021	4				NaN	NaN	0	NaN	1715	2355	4071
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4073	15.127	NaN	5438.6	30	0	1372.1	0.106	+			20266	KENGGARL	8	55	422.7353414610427	843.4561299888854	2	422.7351989746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KENGGARL_	ENSG00000118137|ENST00000236850|APOA1	68.78682469695295	0.41700713582915416	4				NaN	NaN	0	NaN	1716	2355	4071
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4074	15.129	NaN	4144.8	30	0	1112.4	0.106	+			45303	TVSATSPNK	9	54	452.7403096261079	903.4660663190158	2	452.7403869628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVSATSPNK_	ENSG00000105856|ENST00000222574|HBP1;nc|ENSG00000105856|O60381-2|HBP1;nc|ENSG00000105856|O60381-3|HBP1	70.8162118820467	0.13725933411854815	4				NaN	NaN	0	NaN	1717	2355	4071
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4075	15.131	NaN	2883.1	30	0	345.1	0.106			+	15987	HALASHPR	8	47	444.7434752829771	887.4723976327542	2	444.7435302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HALASHPR_	REV__ENST00000251241.8_1_17:57685452-57685632:+|nuORF	30.503639358989545	0.7238069182250283	4				NaN	NaN	0	NaN	1718	2355	4071
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4076	15.132	NaN	787.32	30	0	146.98	0.106	+			11140	FGGGGGTR	8	31	354.67462158203125	NaN	0	354.67462158203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FGGGGGTR_	ENSG00000183684|ENST00000505490|ALYREF;nc|ENSG00000183684|Q86V81|ALYREF	56.72105179125745	1.7418937515398478	4				NaN	NaN	0	NaN	1719	2355	4071
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4077	15.134	NaN	2544.4	30	0	422.24	0.036	+			32971	REDSKPHSL	9	39	534.7752679859743	NaN	0	534.775390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_REDSKPHSL_	ATRIP|p.L345Cfs*31|3|0.28|ENSG00000164053|chr3:48459889-48459889|C/-|frameshift_variant;ENSG00000164053|ENST00000320211|ATRIP;nc|ENSG00000164053|Q8WXE1-2|ATRIP;nc|ENSG00000164053|Q8WXE1-3|ATRIP;nc|ENSG00000164053|Q8WXE1-5|ATRIP	42.86426827375447	0.2558691296974908	4				NaN	NaN	0	NaN	1720	2355	4071
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4078	15.135	NaN	24768	30	0	3682.2	0.139	+			6339	AVTKYTSSK	9	81	492.7717980208513	983.5290431085026	2	493.27276611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AVTKYTSSK_	ENSG00000146047|ENST00000274764|H2BC1;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000196890|ENST00000693095|H2BC26;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000436555.1_1_1:228651916-228652012:-|nuORF;nc|ENSG00000203814|Q5QNW6-2|H2BC18;nc|ENSG00000285480|A0A2R8Y619|H2BK1	142.36107225718385	0.009372392051035914	4				NaN	NaN	0	NaN	1721	2355	4071
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4096	15.174	NaN	4320.7	30	0	1495.8	0.214	+			22525	KTQKIVIKK	9	45	362.58506972993547	NaN	0	362.5850830078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTQKIVIKK_	ENSG00000147654|ENST00000337573|EBAG9;nc|ENSG00000147654|O00559-2|EBAG9	78.26377905018397	0.07733306720594871	4				NaN	NaN	0	NaN	1736	2358	4095
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4097	15.178	NaN	2752.5	30	0	959.86	0.106			+	21865	KRLLQLTKQ	9	56	376.5799978642805	NaN	0	376.5800476074219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KRLLQLTKQ_	REV__ENSG00000126561|ENST00000590949|STAT5A;REV__ENSG00000173757|ENST00000293328|STAT5B;REV__ENST00000468312.1_1_17:40370167-40384145:-|nuORF;REV__nc|ENSG00000126561|P42229-2|STAT5A;REV__STAT5B|p.H584Tfs*8|3|0.33|ENSG00000173757|chr17:42210428-42210429|-/T|frameshift_variant;REV__STAT5B|p.K583Nfs*16|2|0.34|ENSG00000173757|chr17:42210429-42210429|T/-|frameshift_variant	44.377184641726394	0.24544280798894275	4				NaN	NaN	0	NaN	1737	2358	4095
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4098	15.18	NaN	7499.2	30	0	2017.4	0.106	+			38983	SSSASSTLK	9	54	434.22442651837537	866.4343001035508	2	434.2243957519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSSASSTLK_	ENSG00000138162|ENST00000369005|TACC2;nc|ENSG00000138162|O95359-1|TACC2;nc|ENSG00000138162|O95359-3|TACC2;nc|ENSG00000138162|O95359-5|TACC2;nc|ENSG00000138162|O95359-6|TACC2;TACC2|p.V2229Cfs*22|1|0.07|ENSG00000138162|chr10:122211108-122211109|-/A|frameshift_variant	107.00750918261382	0.032051501805654005	4				NaN	NaN	0	NaN	1738	2358	4095
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4099	15.182	NaN	2005.9	30	0	156.36	0.106			+	13684	GPGSLGQPK	9	50	420.7322201057507	839.4498872783014	2	420.73223876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GPGSLGQPK_	REV__ENST00000361725.4_1_2:172953356-172953578:+|nuORF	64.20726635412375	0.17854274437659667	4				NaN	NaN	0	NaN	1739	2358	4095
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4100	15.183	NaN	1261.4	30	0	212.36	0.106			+	26812	LVSPSSGRPL	10	45	506.7928235898308	1011.5710942464616	2	506.7929992675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LVSPSSGRPL_	REV__ENSG00000118707|ENST00000373872|TGIF2	31.529811441608018	0.6223461015008678	4				NaN	NaN	0	NaN	1740	2358	4095
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4101	15.185	NaN	1134.8	30	0	169.38	0.035			+	-1	LMMLVGIIK	9	43	517.3109080730961	1032.6072632129922	2	517.3120727539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_LMM(Oxidation (M))LVGIIK_	REV__tr|U7SQW5|U7SQW5_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01827PE=4SV=1	20.481830146152948	0.6112419832031293	4				NaN	NaN	0	NaN	1741	2358	4095
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4119	15.223	NaN	52622	30	0	12044	0.214			+	1677	AGSPGSDGKE	10	91	452.7038839113452	903.3932148894904	2	452.7041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AGSPGSDGKE_	REV__ENSG00000080573|ENST00000264828|COL5A3	52.936696900407355	0.4300801048568001	4				NaN	NaN	0	NaN	1756	2361	4118
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4120	15.226	NaN	4961.7	30	0	634.97	0.106	+			35990	SEHPSTSKM	9	57	502.22921667166077	1002.4438804101216	2	502.2291564941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEHPSTSKM_	ENSG00000102241|ENST00000218364|HTATSF1;HTATSF1|p.K555Nfs*38|1|0.74|ENSG00000102241|chrX:136511406-136511406|A/-|frameshift_variant;HTATSF1|p.V610Cfs*2|1|0.32|ENSG00000102241|chrX:136511568-136511568|A/-|frameshift_variant	77.31757898189308	0.1091473830098891	4				NaN	NaN	0	NaN	1757	2361	4118
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4121	15.228	NaN	7347.1	30	0	2834.9	0.106	+			13972	GSASPAVTK	9	55	409.2241522010072	816.4337514688144	2	409.2240905761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GSASPAVTK_	ENSG00000197969|ENST00000360280|VPS13A;nc|ENSG00000197969|Q96RL7-2|VPS13A;nc|ENSG00000197969|Q96RL7-3|VPS13A;nc|ENSG00000197969|Q96RL7-4|VPS13A;VPS13A|p.I1709Nfs*6|1|0.34|ENSG00000197969|chr9:77318397-77318398|-/A|frameshift_variant;VPS13A|p.M1697Cfs*13|1|0.07|ENSG00000197969|chr9:77318363-77318363|A/-|frameshift_variant;VPS13A|p.N2071Tfs*18|2|0.32|ENSG00000197969|chr9:77337367-77337367|A/-|frameshift_variant;VPS13A|p.Y2315Ifs*2|1|0.09|ENSG00000197969|chr9:77340463-77340463|T/-|frameshift_variant	80.45461616416974	0.09558281504443908	4				NaN	NaN	0	NaN	1758	2361	4118
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4122	15.23	NaN	23034	30	0	12261	0.106	+			43620	TINGHNAEVRK	11	71	413.55810898290207	1237.6524975489062	3	413.5580139160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TINGHNAEVRK_	ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;ENST00000495810.1_1_7:26235422-26236427:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1	55.721020083383095	0.36165090524447163	4				NaN	NaN	0	NaN	1759	2361	4118
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4123	15.232	NaN	4388.9	30	0	476.72	0.038	+			1409	AEVTSHAA	8	65	393.1928361787829	784.3711194243658	2	393.21551513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEVTSHAA_	ENSG00000050405|ENST00000341247|LIMA1;LIMA1|p.T536Lfs*38|2|0.4|ENSG00000050405|chr12:50177739-50177739|G/-|frameshift_variant;nc|ENSG00000050405|Q9UHB6-4|LIMA1	47.91560031466742	0.6071945918984287	4				NaN	NaN	0	NaN	1760	2361	4118
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4141	15.27	NaN	7387.5	30	0	1788.5	0.214	+			1410	AEVTSHAA	8	52	393.1928361787829	784.3711194243658	2	393.19287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEVTSHAA_	ENSG00000050405|ENST00000341247|LIMA1;LIMA1|p.T536Lfs*38|2|0.4|ENSG00000050405|chr12:50177739-50177739|G/-|frameshift_variant;nc|ENSG00000050405|Q9UHB6-4|LIMA1	82.30502934623384	0.30436709589983096	4				NaN	NaN	0	NaN	1775	2364	4140
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4142	15.273	NaN	3241.3	30	0	887.27	0.106				-1	 	0	43	387.22803277708414	386.22075631048415	1	387.2295227050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1776	2364	4140
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4143	15.275	NaN	1083.1	30	0	305.93	0.106			+	21380	KMKEEVKAVK	10	31	397.2386169433594	NaN	0	397.2386169433594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KMKEEVKAVK_	REV__ENSG00000121297|ENST00000240587|TSHZ3;REV__TSHZ3|p.A877Pfs*28|1|0.2|ENSG00000121297|chr19:31277164-31277164|C/-|frameshift_variant;REV__TSHZ3|p.E1034Rfs*45|1|0.07|ENSG00000121297|chr19:31276694-31276694|G/-|frameshift_variant;REV__TSHZ3|p.M1028Nfs*30|1|0.15|ENSG00000121297|chr19:31276710-31276711|-/T|frameshift_variant;REV__TSHZ3|p.P674Rfs*22|1|0.36|ENSG00000121297|chr19:31277772-31277772|G/-|frameshift_variant	33.921630207806714	0.38879399011744475	4				NaN	NaN	0	NaN	1777	2364	4140
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4144	15.277	NaN	591.65	30	0	108.88	0.106				-1	KMPEILKT	8	30	488.2829895019531	NaN	0	488.2829895019531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_KM(Oxidation (M))PEILKT_	ENSG00000146670|ENST00000275517|CDCA5	30.503639358989545	1.7418937515398478	4				NaN	NaN	0	NaN	1778	2364	4140
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4145	15.279	NaN	206.71	30	0	15.992	0.036			+	30897	QEKQSTLKQ	9	18	545.2992553710938	NaN	0	545.2992553710938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QEKQSTLKQ_	REV__ENSG00000162702|ENST00000367353|ZNF281;REV__nc|ENSG00000162702|Q9Y2X9-2|ZNF281;REV__ZNF281|p.K795N|1|0.1|ENSG00000162702|chr1:200407321-200407321|T/G|missense_variant	14.137123925751023	0.3891339986947948	4				NaN	NaN	0	NaN	1779	2364	4140
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4163	15.316	NaN	7803.7	30	0	2616.5	0.214	+			4941	ATQQELRAK	9	53	348.8645935058594	NaN	0	348.8645935058594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATQQELRAK_	ENSG00000133392|ENST00000300036|MYH11;nc|ENSG00000133392|P35749-2|MYH11;nc|ENSG00000133392|P35749-3|MYH11;nc|ENSG00000133392|P35749-4|MYH11	82.24051045832904	0.06370642293906256	4				NaN	NaN	0	NaN	1794	2367	4162
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4164	15.319	NaN	7235.8	30	0	1198.9	0.106	+			1394	AEVQGRSDG	9	51	459.71710444950037	917.4196559658008	2	459.7169494628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEVQGRSDG_	ENSG00000086758|ENST00000262854|HUWE1;nc|ENSG00000086758|Q7Z6Z7-2|HUWE1;nc|ENSG00000086758|Q7Z6Z7-3|HUWE1	51.33545320467046	0.2872990594074956	4				NaN	NaN	0	NaN	1795	2367	4162
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4165	15.321	NaN	892.92	30	0	165.3	0.106				-1	CGYYLGRRMFI	11	36	484.57061767578125	NaN	0	484.57061767578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_C(Carbamidomethyl (C))GYYLGRRM(Oxidation (M))FI_	ENSG00000059377|ENST00000448866|TBXAS1;nc|ENSG00000059377|P24557-2|TBXAS1;nc|ENSG00000059377|P24557-3|TBXAS1;nc|ENSG00000059377|P24557-4|TBXAS1	14.693671053092006	0.456735970842152	4				NaN	NaN	0	NaN	1796	2367	4162
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4166	15.323	NaN	2128.1	30	0	677.71	0.106	+			35044	SADSKKPA	8	34	402.21638140727816	802.4182098813563	2	402.2164001464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SADSKKPA_	ENSG00000162105|ENST00000601538|SHANK2;nc|ENSG00000162105|Q9UPX8-1|SHANK2;nc|ENSG00000162105|Q9UPX8-4|SHANK2;SHANK2|p.P1101Lfs*73|1|0.06|ENSG00000162105|chr11:70485854-70485854|G/-|frameshift_variant	24.20275056022122	0.7724576178584145	4				NaN	NaN	0	NaN	1797	2367	4162
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4167	15.325	NaN	1693.8	30	0	193.25	0.106				-1	 	0	38	679.9784141502267	NaN	0	680.3123168945312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1798	2367	4162
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4168	15.327	NaN	3130.5	30	0	486.38	0.033				-1	LSPSSLPL	8	40	428.2430419921875	NaN	0	428.2430419921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LSPSSLPL_	ENST00000218104.5_1_X:152994828-153001577:+|nuORF	44.53106598305862	1.7418937515398478	4				NaN	NaN	0	NaN	1799	2367	4162
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4169	15.327	NaN	4550.4	30	0	1009.9	0.139	+			50754	YEKKAAKL	8	57	475.78676369409925	949.5589744549985	2	475.78692626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YEKKAAKL_	ENSG00000189403|ENST00000341423|HMGB1;nc|ENSG00000067066|P23497|SP100	67.49366992349736	0.4277823096851425	4				NaN	NaN	0	NaN	1800	2367	4162
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4187	15.366	NaN	11648	30	0	1939.5	0.214	+			15611	GVKGGDVPK	9	62	428.7478507859242	855.4811486386484	2	428.7476806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVKGGDVPK_	ENSG00000198771|ENST00000367854|RCSD1;nc|ENSG00000198771|Q6JBY9-2|RCSD1;RCSD1|p.P353L|1|0.14|ENSG00000198771|chr1:167697682-167697682|C/T|missense_variant	132.757866228626	0.013877640931359021	4				NaN	NaN	0	NaN	1815	2370	4186
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4188	15.369	NaN	27007	30	0	5753.5	0.106	+			2664	AQNAKVIEK	9	78	334.19744072493756	999.5704927750128	3	334.1977233886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AQNAKVIEK_	ENSG00000018610|ENST00000644802|STEEP1;ENST00000469448.1_1_X:118673692-118676584:-|nuORF;nc|ENSG00000018610|Q9H5V9-2|STEEP1;nc|ENSG00000018610|Q9H5V9-3|STEEP1	67.49366992349736	0.1516260258713357	4				NaN	NaN	0	NaN	1816	2370	4186
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4189	15.371	NaN	2260.7	30	0	773.14	0.106	+			44765	TTNQNVIKK	9	41	349.20465087890625	NaN	0	349.20465087890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TTNQNVIKK_	ENSG00000121621|ENST00000263181|KIF18A;ENST00000526288.1_1_11:28119059-28119494:-|nuORF;ENST00000533466.1_1_11:28098218-28119398:-|nuORF;KIF18A|p.F80Lfs*23|1|0.23|ENSG00000121621|chr11:28097708-28097708|A/-|frameshift_variant;KIF18A|p.R666Kfs*29|1|0.12|ENSG00000121621|chr11:28036616-28036617|-/T|frameshift_variant	29.14955571784316	0.3303970763161698	4				NaN	NaN	0	NaN	1817	2370	4186
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4190	15.373	NaN	1689.6	30	0	233.67	0.106	+			35958	SEGRPTKE	8	44	452.22954662635686	NaN	0	452.2296447753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SEGRPTKE_	ENSG00000168843|ENST00000306100|FSTL5;FSTL5|p.F429Lfs*10|1|0.35|ENSG00000168843|chr4:161538191-161538191|A/-|frameshift_variant;FSTL5|p.K477Nfs*62|1|0.29|ENSG00000168843|chr4:161500043-161500043|C/-|frameshift_variant;FSTL5|p.Q123Tfs*9|1|0.17|ENSG00000168843|chr4:161920446-161920447|-/T|frameshift_variant;FSTL5|p.S401Kfs*44|1|0.04|ENSG00000168843|chr4:161538276-161538277|-/ATTATAACAAATAGATT|frameshift_variant;FSTL5|p.T78Nfs*27|1|0.28|ENSG00000168843|chr4:161920580-161920581|-/T|frameshift_variant;FSTL5|p.V534Lfs*5|1|0.34|ENSG00000168843|chr4:161481029-161481029|T/-|frameshift_variant;FSTL5|p.Y458Mfs*7|1|0.1|ENSG00000168843|chr4:161500102-161500102|A/-|frameshift_variant;nc|ENSG00000168843|Q8N475-2|FSTL5;nc|ENSG00000168843|Q8N475-3|FSTL5	30.503639358989545	1.7418937515398478	4				NaN	NaN	0	NaN	1818	2370	4186
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4191	15.375	NaN	1617.7	30	0	210.07	0.035	+			32161	QSQKEKKQ	8	57	502.27984138497726	1002.5451298367545	2	502.2799987792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QSQKEKKQ_	ENST00000395442.5_1_10:55568369-55568990:-|nuORF	82.24051045832904	0.30490469762271794	4				NaN	NaN	0	NaN	1819	2370	4186
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4209	15.41	NaN	14327	30	0	2309.7	0.214				-1	FTLEDICMLRR	11	70	490.57928445232693	1468.7160239571808	3	490.5794982910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_FTLEDIC(Carbamidomethyl (C))M(Oxidation (M))LRR_	ENSG00000163719|ENST00000296003|MTMR14;ENST00000414996.1_1_3:9710441-9730764:+|nuORF;nc|ENSG00000163719|Q8NCE2-2|MTMR14;nc|ENSG00000163719|Q8NCE2-3|MTMR14	23.37791116691581	0.7445759747191538	4				NaN	NaN	0	NaN	1834	2373	4208
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4210	15.413	NaN	14374	30	0	2280.7	0.106	+			27771	MRLLEFFFYQD	11	78	503.57809531965506	1507.7124565591653	3	503.5777282714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MRLLEFFFYQD_	ENST00000427910.1_1_X:35077528-35077942:+|nuORF	21.0322348234405	0.7691802065814517	4				NaN	NaN	0	NaN	1835	2373	4208
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4211	15.416	NaN	1806.9	30	0	185.15	0.106			+	46816	VIANWSDVAA	10	51	523.2673950195312	NaN	0	523.2673950195312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VIANWSDVAA_	REV__ENSG00000198919|ENST00000361582|DZIP3;REV__ENST00000495008.5_1_3:108373019-108406879:+|nuORF	37.81151784470057	0.3760215235790741	4				NaN	NaN	0	NaN	1836	2373	4208
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4212	15.417	NaN	5604.2	30	0	2453	0.106			+	-1	QIIMHNCYRAP	11	58	454.55144737402156	NaN	0	454.55145263671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_QIIM(Oxidation (M))HNCYRAP_	REV__ENSG00000258436|ENST00000696784|RNASE12	25.125986553469783	0.45344013546260314	4				NaN	NaN	0	NaN	1837	2373	4208
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4213	15.419	NaN	1453.8	30	0	315.98	0.106				-1	 	0	43	585.7596436504608	1169.5047343677215	2	585.7608642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1838	2373	4208
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4214	15.421	NaN	1173.7	30	0	308.84	0.038			+	-1	ARIMRGLTNI	10	32	387.55714510537246	1159.6496059163173	3	387.5567932128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_ARIM(Oxidation (M))RGLTNI_	REV__DSP|p.T37Hfs*56|1|0.17|ENSG00000096696|chr6:7542017-7542018|-/G|frameshift_variant;REV__DSP|p.Y787Lfs*2|1|0.17|ENSG00000096696|chr6:7574715-7574716|-/T|frameshift_variant;REV__ENSG00000096696|ENST00000379802|DSP;REV__nc|ENSG00000096696|P15924-2|DSP;REV__nc|ENSG00000096696|P15924-3|DSP	20.030474535948922	0.7146664069068879	4				NaN	NaN	0	NaN	1839	2373	4208
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4215	15.422	NaN	1268	30	0	739.75	0.141	+			33416	RIHEYKPL	8	30	528.3023071289062	NaN	0	528.3023071289062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RIHEYKPL_	ENSG00000203872|ENST00000388923|C6orf163	21.9598887501803	1.7418937515398478	4				NaN	NaN	0	NaN	1840	2373	4208
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4231	15.46	NaN	8624.3	30	0	3328.7	0.214			+	1609	AGLVLKAQ	8	56	400.25521517877377	798.4958774243476	2	400.2552490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AGLVLKAQ_	REV__ENST00000589645.5_1_17:42461260-42462716:-|nuORF	100.27268790702828	0.2505283342897286	4				NaN	NaN	0	NaN	1853	2376	4230
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4232	15.464	NaN	22190	30	0	6863.2	0.106	+			44592	TTCSKVFKK	9	69	366.87054443359375	NaN	0	366.87054443359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_TTC(Carbamidomethyl (C))SKVFKK_	ENSG00000167625|ENST00000301215|ZNF526	58.22992032128504	0.15686832049467786	4				NaN	NaN	0	NaN	1854	2376	4230
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4233	15.466	NaN	10306	30	0	1325.2	0.106	+			35445	SASHPMVGK	9	79	457.2311802779142	912.4478076226284	2	457.231201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SASHPMVGK_	ENSG00000148498|ENST00000374788|PARD3;nc|ENSG00000148498|Q8TEW0-10|PARD3;nc|ENSG00000148498|Q8TEW0-11|PARD3;nc|ENSG00000148498|Q8TEW0-4|PARD3;nc|ENSG00000148498|Q8TEW0-6|PARD3;nc|ENSG00000148498|Q8TEW0-7|PARD3;nc|ENSG00000148498|Q8TEW0-8|PARD3;nc|ENSG00000148498|Q8TEW0-9|PARD3;nc|ENSG00000148498|Q8TEW0|PARD3;PARD3|p.I456*|1|0.04|ENSG00000148498|chr10:34382573-34382573|T/-|frameshift_variant;PARD3|p.S1335Lfs*15|1|0.17|ENSG00000148498|chr10:34111237-34111238|-/G|frameshift_variant	122.1759843771914	0.019882474861609503	4				NaN	NaN	0	NaN	1855	2376	4230
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4234	15.468	NaN	17343	30	0	6125.2	0.106	+			37783	SLYDKQQRGK	10	54	408.22255235329874	NaN	0	408.2226257324219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLYDKQQRGK_	ENSG00000129007|ENST00000467889|CALML4;nc|ENSG00000129007|Q96GE6|CALML4	45.02220120713402	0.3370728479115332	4				NaN	NaN	0	NaN	1856	2376	4230
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4235	15.469	NaN	1682.8	30	0	313.58	0.106	+			32992	REENKVRAV	9	45	550.8123168945312	NaN	0	550.8123168945312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_REENKVRAV_	ENSG00000099812|ENST00000215582|MISP	56.43379154798735	0.16452882468284893	4				NaN	NaN	0	NaN	1857	2376	4230
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4236	15.471	NaN	2032.1	30	0	416.81	0.033	+			21774	KQSMAGAGP	9	53	423.7103497961718	845.4061466591436	2	423.7102355957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KQSMAGAGP_	ENST00000522841.6_1_16:21495824-21531728:-|nuORF	55.50420428727701	0.2510918378945873	4				NaN	NaN	0	NaN	1858	2376	4230
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4237	15.472	NaN	1407	30	0	389.39	0.139	+			24418	LGAPRDAAPS	10	45	477.7535095214844	NaN	0	477.7535095214844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LGAPRDAAPS_	ENSG00000197245|ENST00000374268|FAM110D	30.317721548370564	0.4006274431774794	4				NaN	NaN	0	NaN	1859	2376	4230
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4255	15.51	NaN	6678.9	30	0	1404.1	0.214	+			22243	KTAGINVRK	9	63	493.80925195897186	985.6039509847437	2	493.8092346191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTAGINVRK_	ENSG00000115484|ENST00000394440|CCT4;nc|ENSG00000115484|P50991-2|CCT4	82.7504851949679	0.08565546331141553	4				NaN	NaN	0	NaN	1874	2379	4254
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4256	15.514	NaN	3053.2	30	0	361.74	0.106			+	-1	FMSQVMFK	8	56	345.16793910877726	NaN	0	345.1678466796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_FMSQVM(Oxidation (M))FK_	REV__ENSG00000124164|ENST00000475243|VAPB;REV__ENST00000463370.5_1_20:57007450-57019288:+|nuORF	37.15910966729921	1.7418937515398478	4				NaN	NaN	0	NaN	1875	2379	4254
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4257	15.516	NaN	3813.6	30	0	498.32	0.106			+	34742	RWTSHTPS	8	52	486.23960512790984	970.4646573226197	2	486.2400817871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RWTSHTPS_	REV__nc|ENSG00000063322|Q9NX70-2|MED29	63.30626980617807	0.4690498839812213	4				NaN	NaN	0	NaN	1876	2379	4254
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4258	15.518	NaN	1767.6	30	0	289.99	0.106	+			34648	RVQGTPVASK	10	54	521.8036993570609	1041.5928457809216	2	521.8040771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RVQGTPVASK_	DIMT1|p.N254Tfs*12|1|0.38|ENSG00000086189|chr5:62392202-62392202|T/-|frameshift_variant;ENSG00000086189|ENST00000199320|DIMT1;ENST00000509182.1_1_5:61688751-61699599:-|nuORF	56.632244143249146	0.3964695498866976	4				NaN	NaN	0	NaN	1877	2379	4254
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4259	15.52	NaN	10819	30	0	5438	0.106				-1	LGLCLPPGP	9	62	462.25577083491504	922.4969887366301	2	462.25592041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_LGLC(Carbamidomethyl (C))LPPGP_	ENST00000471717.1_1_7:99772169-99774834:-|nuORF	49.21078951299608	0.3122205139198386	4				NaN	NaN	0	NaN	1878	2379	4254
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4260	15.521	NaN	1747	30	0	567.71	0.037	+			38743	SSLPPCPSPPS	11	34	375.8476257324219	NaN	0	375.8476257324219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_SSLPPC(Carbamidomethyl (C))PSPPS_	ENST00000439374.6_1_1:151025289-151025496:-|nuORF	42.33807565288922	0.3703495330385095	4				NaN	NaN	0	NaN	1879	2379	4254
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4261	15.522	NaN	10930	30	0	1577.5	0.145	+			46450	VESKKKAVQRL	11	61	429.2700380156257	1284.788284647077	3	429.2699890136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VESKKKAVQRL_	ENSG00000198900|ENST00000361337|TOP1	65.2775769800794	0.27634548443598095	4				NaN	NaN	0	NaN	1880	2379	4254
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4279	15.56	NaN	18294	30	0	5879.5	0.214	+			33457	RIQEHFNKK	9	74	400.5594690040753	1198.656577612426	3	400.5594787597656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RIQEHFNKK_	ENSG00000157349|ENST00000288071|DDX19B;ENSG00000168872|ENST00000302243|DDX19A;ENST00000569319.5_1_16:70399881-70405886:+|nuORF;ENST00000569771.5_1_16:70395504-70405886:+|nuORF;nc|ENSG00000168872|Q9NUU7-2|DDX19A;nc|ENSG00000260537|Q9UMR2-2|DDX19B;nc|ENSG00000260537|Q9UMR2-3|DDX19B;nc|ENSG00000260537|Q9UMR2-4|DDX19B	85.16082228582465	0.07850854922700509	4				NaN	NaN	0	NaN	1895	2382	4278
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4280	15.563	NaN	27207	30	0	4885.1	0.106	+			34442	RTVSDSIKK	9	104	345.2047173284401	NaN	0	345.2047119140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RTVSDSIKK_	ENSG00000137076|ENST00000314888|TLN1;nc|ENSG00000137076|Q9Y490-2|TLN1	157.3448221729694	0.00838669633614086	4				NaN	NaN	0	NaN	1896	2382	4278
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4281	15.566	NaN	7236.4	30	0	2803.8	0.106	+			21130	KKSLMLVKK	9	56	358.90691532504286	1073.6989165753287	3	358.9070129394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KKSLMLVKK_	ENST00000361924.6_1_3:37370567-37376559:+|nuORF	27.882242232435846	0.5426732730940306	4				NaN	NaN	0	NaN	1897	2382	4278
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4282	15.567	NaN	2387.3	30	0	748.6	0.106	+			38474	SSASSTSLK	9	45	434.22463614622416	866.4347193592483	2	434.2243957519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSASSTSLK_	ENSG00000196781|ENST00000376499|TLE1	80.45461616416974	0.09558281504443908	4				NaN	NaN	0	NaN	1898	2382	4278
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4283	15.569	NaN	25948	30	0	6005	0.106	+			2858	ASAPANVSK	9	68	422.7298537390801	843.4451545449602	2	422.7295837402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASAPANVSK_	ENSG00000135597|ENST00000450536|REPS1;nc|ENSG00000135597|Q96D71-2|REPS1;nc|ENSG00000135597|Q96D71-3|REPS1;nc|ENSG00000135597|Q96D71-4|REPS1	104.42354056486148	0.0346881550498418	4				NaN	NaN	0	NaN	1899	2382	4278
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4284	15.571	NaN	1995.5	30	0	926.31	0.034			+	37900	SPALHPRQ	8	48	453.2500621171848	904.4855713011697	2	453.25018310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SPALHPRQ_	REV__ENST00000407714.1_1_2:241564763-241570253:+|nuORF	30.503639358989545	0.7238069182250283	4				NaN	NaN	0	NaN	1900	2382	4278
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4285	15.572	NaN	8336.3	30	0	2830.5	0.142			+	3858	ATAMLFTPVA	10	42	341.1831234654329	NaN	0	341.1831359863281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATAMLFTPVA_	REV__ENSG00000254585|ENST00000650528|MAGEL2	42.86426827375447	0.3507156137006061	4				NaN	NaN	0	NaN	1901	2382	4278
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4303	15.61	NaN	28751	30	0	15471	0.214	+			405	AASSSSLEK	9	63	440.2251059366157	878.4356589400314	2	440.22540283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AASSSSLEK_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196834|ENST00000451531|POTEI;ENST00000417985.1_1_X:46147855-46148119:-|nuORF;ENST00000418987.2_1_9:103493819-103494230:+|nuORF;ENST00000423183.1_1_3:12112396-12112453:+|nuORF;ENST00000450451.1_1_1:238090483-238090852:+|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2	132.757866228626	0.013877640931359021	4				NaN	NaN	0	NaN	1916	2385	4302
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4304	15.614	NaN	1793.1	30	0	367.07	0.106			+	2796	ARSHEGQLQ	9	40	513.2598876953125	NaN	0	513.2598876953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ARSHEGQLQ_	REV__ENSG00000164440|ENST00000358430|TXLNB;REV__TXLNB|p.P545Lfs*2|1|0.31|ENSG00000164440|chr6:139242947-139242947|G/-|frameshift_variant	25.57405402267927	0.3484490411150625	4				NaN	NaN	0	NaN	1917	2385	4302
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4305	15.616	NaN	1594.1	30	0	310.09	0.106			+	21707	KQIEARCD	8	49	481.7380676269531	NaN	0	481.7380676269531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KQIEARCD_	REV__ENST00000562226.5_1_16:981695-984108:-|nuORF	37.15910966729921	1.7418937515398478	4				NaN	NaN	0	NaN	1918	2385	4302
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4306	15.618	NaN	1295.2	30	0	326.36	0.106			+	1738	AHNVIHKA	8	43	445.2535400390625	NaN	0	445.2535400390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AHNVIHKA_	REV__ENSG00000197892|ENST00000524189|KIF13B;REV__KIF13B|p.K1288Rfs*13|1|0.34|ENSG00000197892|chr8:29113530-29113530|T/-|frameshift_variant	26.79610172149135	1.7418937515398478	4				NaN	NaN	0	NaN	1919	2385	4302
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4307	15.62	NaN	5983.4	30	0	3898.9	0.106			+	-1	RSFIMGPGGMC	11	44	606.7702655565014	1211.5259781798027	2	606.771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_RSFIMGPGGMC(Carbamidomethyl (C))_	REV__ENSG00000198108|ENST00000305031|CHSY3;REV__ENST00000507545.1_1_5:129243822-129519938:+|nuORF	36.446750945000026	0.6065623449959539	4				NaN	NaN	0	NaN	1920	2385	4302
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4308	15.622	NaN	6170.1	30	0	1388	0.035	+			33318	RGSEPVPEK	9	56	499.7666873250621	997.5188217169242	2	499.76690673828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RGSEPVPEK_	ENSG00000084070|ENST00000372718|SMAP2;nc|ENSG00000084070|Q8WU79-2|SMAP2;nc|ENSG00000084070|Q8WU79-3|SMAP2	66.96192283764107	0.15557981141143568	4				NaN	NaN	0	NaN	1921	2385	4302
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4309	15.622	NaN	2078.5	30	0	372.43	0.139	+			40827	SVEGPSQAK	9	50	451.73219427497514	NaN	0	451.7327575683594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVEGPSQAK_	ENSG00000196924|ENST00000369850|FLNA;FLNA|p.A1026Lfs*20|1|0.42|ENSG00000196924|chrX:154361439-154361439|C/-|frameshift_variant;FLNA|p.G2237Efs*109|1|0.28|ENSG00000196924|chrX:154352240-154352240|C/-|frameshift_variant;FLNA|p.Q1716Sfs*23|2|0.38|ENSG00000196924|chrX:154354896-154354896|G/-|frameshift_variant;FLNA|p.R2520Vfs*16|1|0.7|ENSG00000196924|chrX:154349560-154349560|G/-|frameshift_variant;nc|ENSG00000196924|P21333-2|FLNA	58.22992032128504	0.15686832049467786	4				NaN	NaN	0	NaN	1922	2385	4302
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4327	15.662	NaN	15962	30	0	5745.2	0.214			+	40369	STTTQTISQ	9	71	483.740272280707	965.465991628214	2	483.74017333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STTTQTISQ_	REV__ENSG00000173572|ENST00000342929|NLRP13;REV__NLRP13|p.F460Sfs*10|1|0.2|ENSG00000173572|chr19:55912438-55912438|A/-|frameshift_variant;REV__NLRP13|p.F543Lfs*8|1|0.42|ENSG00000173572|chr19:55912188-55912188|A/-|frameshift_variant	118.74307786436346	0.02196067127630568	4				NaN	NaN	0	NaN	1937	2388	4326
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4328	15.666	NaN	1202.3	30	0	188.32	0.106	+			16752	HLRAQDLH	8	40	495.26718154651303	NaN	0	495.2672119140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HLRAQDLH_	ENSG00000148334|ENST00000338961|PTGES2;ENST00000474124.5_1_9:130886092-130889945:-|nuORF	33.51558372728122	1.7418937515398478	4				NaN	NaN	0	NaN	1938	2388	4326
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4329	15.668	NaN	1391.4	30	0	234.22	0.106	+			39774	STKKEVIMK	9	44	532.313232421875	NaN	0	532.313232421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STKKEVIMK_	BPTF|p.D2844Afs*20|1|0.08|ENSG00000171634|chr17:67959766-67959767|-/C|frameshift_variant;BPTF|p.K2718Nfs*36|3|0.12|ENSG00000171634|chr17:67948150-67948150|A/-|frameshift_variant;ENSG00000171634|ENST00000306378|BPTF;nc|ENSG00000171634|Q12830-4|BPTF;nc|ENSG00000171634|Q12830|BPTF	76.16968421966216	0.08450868013726211	4				NaN	NaN	0	NaN	1939	2388	4326
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4330	15.67	NaN	3432.4	30	0	782.92	0.106	+			33984	RSGAPMIKK	9	51	329.8634948730469	NaN	0	329.8634948730469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RSGAPMIKK_	ENSG00000080345|ENST00000444746|RIF1;nc|ENSG00000080345|Q5UIP0-2|RIF1;RIF1|p.E1442Gfs*4|1|0.39|ENSG00000080345|chr2:151463835-151463836|-/A|frameshift_variant;RIF1|p.K1441Rfs*18|1|0.2|ENSG00000080345|chr2:151463836-151463836|A/-|frameshift_variant;RIF1|p.K1505Rfs*18|3|0.3|ENSG00000080345|chr2:151464027-151464027|A/-|frameshift_variant;RIF1|p.S472Ffs*13|1|0.23|ENSG00000080345|chr2:151437275-151437276|-/T|frameshift_variant;RIF1|p.S472Pfs*34|1|0.3|ENSG00000080345|chr2:151437276-151437276|T/-|frameshift_variant;RIF1|p.S692Ffs*15|1|0.43|ENSG00000080345|chr2:151445419-151445420|-/T|frameshift_variant;RIF1|p.S692Qfs*10|1|0.13|ENSG00000080345|chr2:151445420-151445420|T/-|frameshift_variant	53.08895987439943	0.18540527177656715	4				NaN	NaN	0	NaN	1940	2388	4326
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4331	15.671	NaN	3968.1	30	0	716.12	0.106				-1	 	0	54	465.27412489452155	928.5336968558431	2	465.273681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1941	2388	4326
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4332	15.673	NaN	3405.3	30	0	809.21	0.032	+			49355	VVSQTAVQ	8	34	416.23197013182903	830.4493873304581	2	416.23187255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VVSQTAVQ_	ENSG00000198793|ENST00000361445|MTOR;MTOR|p.F821Lfs*34|1|0.28|ENSG00000198793|chr1:11232487-11232487|A/-|frameshift_variant	31.954861631926434	0.7126016770032289	4				NaN	NaN	0	NaN	1942	2388	4326
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4333	15.674	NaN	2459.6	30	0	324.14	0.136				-1	 	0	49	381.73397186028814	NaN	0	381.7338562011719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1943	2388	4326
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4351	15.712	NaN	13553	30	0	2239	0.214	+			40980	SVGKNLASK	9	74	452.26648732437883	902.5184217155577	2	452.26629638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVGKNLASK_	ENSG00000137642|ENST00000260197|SORL1;ENST00000532451.1_1_11:121323091-121416136:+|nuORF;SORL1|p.F2103Lfs*44|1|0.22|ENSG00000137642|chr11:121625218-121625218|T/-|frameshift_variant;SORL1|p.M1581Cfs*34|2|0.28|ENSG00000137642|chr11:121605196-121605196|A/-|frameshift_variant	106.68306549817024	0.032382560583716295	4				NaN	NaN	0	NaN	1958	2391	4350
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4352	15.716	NaN	136640	30	0	15050	0.106			+	50345	WVFWVADCACL	11	101	457.20749292810797	1368.6006493845239	3	457.2076721191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_WVFWVADCAC(Carbamidomethyl (C))L_	REV__TLR7|p.T788A|1|0.63|ENSG00000196664|chrX:12887870-12887870|A/G|missense_variant	51.52775601994872	0.4002081502334604	4				NaN	NaN	0	NaN	1959	2391	4350
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4353	15.718	NaN	2740.3	30	0	1099.1	0.106	+			1657	AGPSNGVAP	9	28	385.19571249564666	768.3768720580933	2	385.1956481933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AGPSNGVAP_	ENSG00000170892|ENST00000396388|TSEN34;TSEN34|p.L178Cfs*214|1|0.36|ENSG00000170892|chr19:54192155-54192155|C/-|frameshift_variant	23.04248740728303	0.5879033540491928	4				NaN	NaN	0	NaN	1960	2391	4350
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4354	15.72	NaN	1181.1	30	0	241.72	0.106	+			16331	HEKQESQDL	9	42	557.2626418156659	NaN	0	557.2626342773438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HEKQESQDL_	ENSG00000137804|ENST00000559596|NUSAP1;ENST00000558123.5_1_15:41625112-41672381:+|nuORF;nc|ENSG00000137804|Q9BXS6-2|NUSAP1;nc|ENSG00000137804|Q9BXS6-3|NUSAP1;nc|ENSG00000137804|Q9BXS6-4|NUSAP1;nc|ENSG00000137804|Q9BXS6-5|NUSAP1;nc|ENSG00000137804|Q9BXS6-6|NUSAP1;nc|ENSG00000137804|Q9BXS6-7|NUSAP1	72.87924865735499	0.09578366712754152	4				NaN	NaN	0	NaN	1961	2391	4350
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4355	15.722	NaN	974.81	30	0	108.81	0.106	+			27346	MIITLSLQ	8	49	467.76934814453125	NaN	0	467.76934814453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_M(Oxidation (M))IITLSLQ_	ENSG00000148482|ENST00000377369|SLC39A12;nc|ENSG00000148482|Q504Y0-2|SLC39A12;nc|ENSG00000148482|Q504Y0-3|SLC39A12;nc|ENSG00000148482|Q504Y0-4|SLC39A12;nc|ENSG00000148482|Q504Y0-5|SLC39A12	45.9519527083369	1.7418937515398478	4				NaN	NaN	0	NaN	1962	2391	4350
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4356	15.723	NaN	11468	30	0	4373.2	0.035	+			35413	SAQTERVPL	9	37	334.18531752051064	999.5341231617319	3	334.1855773925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SAQTERVPL_	ENSG00000159461|ENST00000290649|AMFR	30.503639358989545	0.5181749237905803	4				NaN	NaN	0	NaN	1963	2391	4350
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4357	15.724	NaN	1462	30	0	378.42	0.139				-1	LMAMLFTD	8	51	479.2251930155681	956.4358330979362	2	479.2253723144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_LM(Oxidation (M))AMLFTD_	ENSG00000088836|ENST00000642402|SLC4A11;nc|ENSG00000088836|Q8NBS3-1|SLC4A11;nc|ENSG00000088836|Q8NBS3-4|SLC4A11;nc|ENSG00000088836|Q8NBS3-5|SLC4A11;SLC4A11|p.F477Sfs*7|1|0.26|ENSG00000088836|chr20:3230548-3230548|A/-|frameshift_variant	37.028477286268924	0.6747514403204248	4				NaN	NaN	0	NaN	1964	2391	4350
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4375	15.762	NaN	30337	30	0	15755	0.214	+			17136	HSSGPMVEK	9	83	486.2342204888578	970.4538880445156	2	486.2342834472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HSSGPMVEK_	ENSG00000069509|ENST00000378045|FUNDC1;ENST00000483115.1_1_X:44383446-44401387:-|nuORF;FUNDC1|p.F37C|1|0.33|ENSG00000069509|chrX:44542020-44542020|A/C|missense_variant	129.42129120953632	0.01549634589885217	4				NaN	NaN	0	NaN	1979	2394	4374
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4376	15.765	NaN	3845.3	30	0	819.97	0.106	+			4717	ATMATSGSAR	10	57	476.72907434424616	NaN	0	476.72900390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATMATSGSAR_	ENSG00000141543|ENST00000649764|EIF4A3;ENST00000575957.1_1_17:78115565-78120760:-|nuORF	76.16968421966216	0.118310876128328	4				NaN	NaN	0	NaN	1980	2394	4374
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4377	15.768	NaN	10466	30	0	3982.9	0.106	+			47783	VSIATPKQK	9	33	324.5341710459493	970.5806837380478	3	324.5341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSIATPKQK_	ENSG00000169499|ENST00000617275|PLEKHA2	31.954861631926434	0.5046124803899898	4				NaN	NaN	0	NaN	1981	2394	4374
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4378	15.769	NaN	950.97	30	0	110.82	0.106	+			19611	KDGKEIVAK	9	41	494.2950439453125	NaN	0	494.2950439453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KDGKEIVAK_	tr|U7T3E6|U7T3E6_FUSNUATPaseBadF/BadG/BcrA/BcrDtypedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00402PE=4SV=1	33.921630207806714	0.3063038642147651	4				NaN	NaN	0	NaN	1982	2394	4374
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4379	15.771	NaN	1155.7	30	0	156.96	0.106	+			12060	GAAGLGPLAQQ	11	32	328.1818682153346	981.5237752462037	3	328.1820983886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GAAGLGPLAQQ_	ENST00000601780.5_1_19:50985512-50985971:+|nuORF	37.50817390946774	0.5920388381045607	4				NaN	NaN	0	NaN	1983	2394	4374
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4380	15.773	NaN	441.23	30	0	90.438	0.031	+			35730	SDPGHAPA	8	27	376.1720886230469	NaN	0	376.1720886230469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SDPGHAPA_	ENST00000602321.5_1_16:67682040-67682571:+|nuORF	14.664097394203935	1.7418937515398478	4				NaN	NaN	0	NaN	1984	2394	4374
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4381	15.774	NaN	750.24	30	0	79.993	0.139	+			520	ACRCRAEE	8	49	469.2040100097656	NaN	0	469.2040100097656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ACRCRAEE_	ABCB8|p.G460Afs*31|1|0.34|ENSG00000197150|chr7:151040570-151040570|G/-|frameshift_variant;ENSG00000197150|ENST00000358849|ABCB8;ENST00000466514.5_1_7:150731570-150742433:+|nuORF;ENST00000470645.5_1_7:150733061-150737597:+|nuORF;nc|ENSG00000197150|Q9NUT2-3|ABCB8;nc|ENSG00000197150|Q9NUT2-4|ABCB8;nc|ENSG00000197150|Q9NUT2-5|ABCB8;nc|ENSG00000197150|Q9NUT2|ABCB8	21.9598887501803	1.7418937515398478	4				NaN	NaN	0	NaN	1985	2394	4374
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4399	15.813	NaN	15700	30	0	6824.4	0.214	+			41003	SVGSASSVK	9	62	411.2215234206058	820.4284939080117	2	411.2215270996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVGSASSVK_	ENSG00000144840|ENST00000273375|RABL3	163.1509380574825	0.003936019289634439	4				NaN	NaN	0	NaN	2000	2397	4398
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4400	15.816	NaN	3906.5	30	0	557.53	0.106	+			34279	RTKSVDALK	9	70	509.30622567459784	1016.5978984159957	2	509.3060607910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RTKSVDALK_	ENSG00000101161|ENST00000266079|PRPF6;nc|ENSG00000101161|O94906-2|PRPF6	85.16082228582465	0.07850854922700509	4				NaN	NaN	0	NaN	2001	2397	4398
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4401	15.819	NaN	12490	30	0	1829	0.106	+			6467	AVYKTHVEK	9	68	537.8006630826775	1073.5867732321549	2	537.8013916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVYKTHVEK_	ENSG00000196954|ENST00000444739|CASP4;ENST00000529565.1_1_11:104819221-104819389:-|nuORF;ENST00000534356.1_1_11:104817674-104819389:-|nuORF;nc|ENSG00000196954|P49662-2|CASP4	114.8945686534367	0.024290463251177924	4				NaN	NaN	0	NaN	2002	2397	4398
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4402	15.82	NaN	1460.8	30	0	443.07	0.106	+			22722	KVATKLGVRK	10	31	367.248291015625	NaN	0	367.248291015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KVATKLGVRK_	ENSG00000169016|ENST00000381525|E2F6;ENST00000468775.1_1_2:11591697-11606038:-|nuORF;nc|ENSG00000169016|O75461-2|E2F6;nc|ENSG00000169016|O75461-3|E2F6	20.83715455343099	0.4201028297492154	4				NaN	NaN	0	NaN	2003	2397	4398
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4403	15.822	NaN	4263.9	30	0	1198.1	0.106	+			2704	AQQRYLIHNHA	11	66	450.905113460023	1349.6935109802691	3	451.2394104003906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AQQRYLIHNHA_	ENSG00000168769|ENST00000380013|TET2;nc|ENSG00000168769|Q6N021-2|TET2;nc|ENSG00000168769|Q6N021-3|TET2;TET2|p.V1949Sfs*7|1|0.31|ENSG00000168769|chr4:105276348-105276349|-/A|frameshift_variant	30.568863376406313	0.6691487505135859	4				NaN	NaN	0	NaN	2004	2397	4398
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4404	15.824	NaN	1871.2	30	0	495.6	0.033	+			16169	HEAGVHSV	8	42	418.2061767578125	NaN	0	418.2061767578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HEAGVHSV_	ENSG00000108559|ENST00000573584|NUP88;ENST00000574867.5_1_17:5292093-5322970:-|nuORF	45.9519527083369	1.7418937515398478	4				NaN	NaN	0	NaN	2005	2397	4398
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4420	15.858	NaN	267530	30	0	50234	0.174	+			39062	SSSRAVVVK	9	101	466.77975207948	931.54495122576	2	466.77960205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSSRAVVVK_	CON__H-INV:HIT000292931;CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	101.25262130126117	0.03792372629710479	4				NaN	NaN	0	NaN	2018	2400	4419
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4421	15.861	NaN	24800	30	0	5140.5	0.106	+			41747	SVSKNVNVK	9	82	487.78498311523356	973.5554132972671	2	487.7849426269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVSKNVNVK_	ENSG00000198589|ENST00000651943|LRBA;LRBA|p.L2590*|1|0.41|ENSG00000198589|chr4:150310342-150310342|A/-|frameshift_variant;LRBA|p.T2011Qfs*11|1|0.19|ENSG00000198589|chr4:150599022-150599022|T/-|frameshift_variant;nc|ENSG00000198589|P50851-2|LRBA;nc|ENSG00000198589|P50851|LRBA	150.36159442982594	0.006784847064083231	4				NaN	NaN	0	NaN	2019	2400	4419
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4422	15.863	NaN	3799.8	30	0	869.75	0.106	+			34402	RTSIPVHSK	9	57	512.7982118545718	1023.5818707759437	2	512.7985229492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RTSIPVHSK_	ENSG00000092439|ENST00000646667|TRPM7;ENST00000560849.2_2_15:50868060-50878706:-|nuORF	73.84112541714126	0.12417958948937492	4				NaN	NaN	0	NaN	2020	2400	4419
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4423	15.865	NaN	4259.9	30	0	1630.7	0.106				-1	GSLVLLCTC	9	36	322.4981689453125	NaN	0	322.4981689453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_GSLVLLC(Carbamidomethyl (C))TC_	ENSG00000131183|ENST00000324417|SLC34A1;SLC34A1|p.F397Sfs*16|1|0.31|ENSG00000131183|chr5:177396742-177396742|C/-|frameshift_variant	26.69291269510374	0.34280015626154364	4				NaN	NaN	0	NaN	2021	2400	4419
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4424	15.867	NaN	4520.4	30	0	1083.8	0.106	+			13111	GGGGFGRG	8	37	332.6616032067829	663.3086534803658	2	332.66192626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GGGGFGRG_	REV__CON__Q6IFZ6;WIPF1|p.G82R|1|0.57|ENSG00000115935|chr2:174575318-174575318|C/T|missense_variant	44.53106598305862	0.628196326904373	4				NaN	NaN	0	NaN	2022	2400	4419
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4425	15.869	NaN	4173.4	30	0	620.11	0.106	+			20624	KGFKKSSHLK	10	44	387.23486328125	NaN	0	387.23486328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KGFKKSSHLK_	ENSG00000130856|ENST00000320610|ZNF236;nc|ENSG00000130856|Q9UL36-2|ZNF236;nc|ENSG00000130856|Q9UL36|ZNF236;ZNF236|p.E1775Sfs*19|1|0.31|ENSG00000130856|chr18:76960761-76960761|G/-|frameshift_variant;ZNF236|p.G1607Rfs*13|1|0.1|ENSG00000130856|chr18:76947552-76947553|-/CT|frameshift_variant	44.377184641726394	0.34115073642966565	4				NaN	NaN	0	NaN	2023	2400	4419
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4426	15.87	NaN	2943.3	30	0	580.26	0.036	+			33468	RISESGIKK	9	46	339.8730229155136	1016.5972393467409	3	339.8730773925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RISESGIKK_	ENSG00000131558|ENST00000253861|EXOC4;ENST00000484397.5_1_7:133682345-133692589:+|nuORF	41.42661286455405	0.403525789677298	4				NaN	NaN	0	NaN	2024	2400	4419
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4443	15.906	NaN	30268	30	0	8543.5	0.214	+			42344	TAHDQKTAL	9	73	492.75913294417126	983.5037129551425	2	492.7591247558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAHDQKTAL_	ENSG00000142875|ENST00000370685|PRKACB	124.08010499294276	0.018729767491916592	4				NaN	NaN	0	NaN	2038	2403	4442
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4444	15.91	NaN	16245	30	0	8267.5	0.106	+			22815	KVFNQPKAK	9	68	353.8816666492045	1058.6231705478135	3	353.88189697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVFNQPKAK_	CKAP5|p.K1126Rfs*25|1|0.46|ENSG00000175216|chr11:46767609-46767609|T/-|frameshift_variant;CKAP5|p.V1971Lfs*42|1|0.03|ENSG00000175216|chr11:46744211-46744212|-/TTGAAAAAAAG|frameshift_variant;ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5	64.20726635412375	0.17854274437659667	4				NaN	NaN	0	NaN	2039	2403	4442
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4445	15.912	NaN	1443.3	30	0	168.43	0.106			+	46263	VEGWLMLL	8	50	480.76472447509354	959.5148960169871	2	481.88677978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VEGWLMLL_	REV__ENSG00000113211|ENST00000231136|PCDHB6	23.036711822280957	0.7814608874307191	4				NaN	NaN	0	NaN	2040	2403	4442
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4446	15.914	NaN	539.22	30	0	53.319	0.106	+			44227	TRRATGRH	8	31	477.77060667722014	953.5266604212403	2	477.770751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TRRATGRH_	ENSG00000070423|ENST00000292363|RNF126;ENST00000591394.2_1_19:651609-663133:-|nuORF	12.206847966760668	0.7875100812264838	4				NaN	NaN	0	NaN	2041	2403	4442
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4447	15.916	NaN	1974.3	30	0	420.13	0.106	+			46361	VEKSINSA	8	45	424.22967529296875	NaN	0	424.22967529296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VEKSINSA_	ENSG00000213799|ENST00000458035|ZNF845	30.317721548370564	1.7418937515398478	4				NaN	NaN	0	NaN	2042	2403	4442
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4448	15.918	NaN	651.72	30	0	116.61	0.036			+	46644	VGDGEVHAKF	10	30	529.7658081054688	NaN	0	529.7658081054688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VGDGEVHAKF_	REV__ENSG00000101596|ENST00000320876|SMCHD1;REV__nc|ENSG00000101596|A6NHR9-2|SMCHD1;REV__SMCHD1|p.D1006Kfs*40|1|0.32|ENSG00000101596|chr18:2729370-2729371|-/AA|frameshift_variant;REV__SMCHD1|p.D1006Tfs*39|2|0.32|ENSG00000101596|chr18:2729371-2729371|A/-|frameshift_variant;REV__SMCHD1|p.G727Rfs*21|1|0.3|ENSG00000101596|chr18:2707832-2707833|-/A|frameshift_variant;REV__SMCHD1|p.K680Nfs*3|2|0.26|ENSG00000101596|chr18:2706442-2706442|A/-|frameshift_variant;REV__SMCHD1|p.M779Wfs*12|1|0.38|ENSG00000101596|chr18:2718226-2718226|A/-|frameshift_variant	20.94693142431847	0.4201028297492154	4				NaN	NaN	0	NaN	2043	2403	4442
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4449	15.918	NaN	900.19	30	0	252.02	0.145				-1	KVCDKAFRR	9	38	393.8852324048633	1178.63386781479	3	393.885498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_KVC(Carbamidomethyl (C))DKAFRR_	ENSG00000167562|ENST00000391785|ZNF701;ENSG00000198538|ENST00000457749|ZNF28;ENSG00000213793|ENST00000638862|ZNF888;nc|ENSG00000167562|Q9NV72|ZNF701;nc|ENSG00000198538|P17035-2|ZNF28	30.317721548370564	0.5199124245378496	4				NaN	NaN	0	NaN	2044	2403	4442
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4466	15.956	NaN	319870	30	0	60745	0.117	+			6332	AVTKYTSAK	9	90	484.7747572222125	967.534961511225	2	484.7751159667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVTKYTSAK_	ENSG00000124635|ENST00000339812|H2BC11;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000234289|ENST00000599962|H2BC12L	169.6522961985778	0.0028262690464207238	4				NaN	NaN	0	NaN	2058	2406	4465
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4467	15.958	NaN	36329	30	0	20634	0.062	+			40707	SVCEGKGLHR	10	64	381.5291924793323	1141.565748038197	3	381.5293884277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SVC(Carbamidomethyl (C))EGKGLHR_	ENSG00000161011|ENST00000389805|SQSTM1;ENST00000466342.1_1_5:179250916-179260288:+|nuORF;nc|ENSG00000161011|Q13501-2|SQSTM1	86.88156770896713	0.14892753630261096	4				NaN	NaN	0	NaN	2059	2406	4465
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4468	15.959	NaN	167460	30	0	25445	0.106	+			6350	AVTRTTPVK	9	99	486.79509345800744	971.5756339828149	2	487.296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVTRTTPVK_	ENST00000395472.2_1_14:55494079-55509730:+|nuORF;ENST00000553735.1_1_14:55494079-55498700:+|nuORF;ENST00000555846.1_1_14:55494079-55498626:+|nuORF	72.2432373244024	0.13108886737667413	4				NaN	NaN	0	NaN	2060	2406	4465
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4469	15.961	NaN	8392.6	30	0	1690.1	0.106			+	2797	ARSIASRAE	9	68	480.76472447509354	959.5148960169871	2	480.7648620605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ARSIASRAE_	REV__ENSG00000148229|ENST00000374171|POLE3;REV__ENST00000479871.1_1_9:116172333-116172573:-|nuORF	42.86426827375447	0.38666266728046506	4				NaN	NaN	0	NaN	2061	2406	4465
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4470	15.963	NaN	924.93	30	0	266.24	0.106			+	19614	KDGRGGLELP	10	30	521.2877336669708	1040.5609144007415	2	522.751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KDGRGGLELP_	REV__ENST00000372264.3_1_9:134165160-134165370:+|nuORF	19.1035232394073	0.7193765342308498	4				NaN	NaN	0	NaN	2062	2406	4465
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4471	15.965	NaN	7079.2	30	0	1870.2	0.106	+			18416	ISAGIEKGQ	9	51	451.75053034690757	901.4865077606152	2	451.7506103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ISAGIEKGQ_	ENST00000524043.1_1_2:190615306-190618806:-|nuORF	51.19269402634007	0.2889735674168909	4				NaN	NaN	0	NaN	2063	2406	4465
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4472	15.967	NaN	804.07	30	0	151.75	0.106	+			47914	VSLRYQCYPE	10	33	419.86993408203125	NaN	0	419.86993408203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VSLRYQCYPE_	ENST00000416543.5_1_4:106629178-106629382:-|nuORF	19.262678746197807	0.4201028297492154	4				NaN	NaN	0	NaN	2064	2406	4465
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4473	15.968	NaN	1889.9	30	0	417.74	0.036	+			13900	GRHRIVVPH	9	29	357.5487024412965	1069.6242779240895	3	358.2048645019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_GRHRIVVPH_	ATP10D|p.L1148*|1|0.28|ENSG00000145246|chr4:47576846-47576846|T/-|frameshift_variant;ATP10D|p.L617Cfs*41|2|0.28|ENSG00000145246|chr4:47557681-47557681|G/-|frameshift_variant;ATP10D|p.L863*|1|0.21|ENSG00000145246|chr4:47560990-47560990|T/-|frameshift_variant;ATP10D|p.L863Ffs*3|1|0.28|ENSG00000145246|chr4:47560989-47560990|-/T|frameshift_variant;ATP10D|p.M414Wfs*10|1|0.3|ENSG00000145246|chr4:47536777-47536777|A/-|frameshift_variant;ENSG00000145246|ENST00000273859|ATP10D;nc|ENSG00000145246|Q9P241-2|ATP10D	12.959181472943097	0.6112419832031292	4				NaN	NaN	0	NaN	2065	2406	4465
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4491	16.006	NaN	43374	30	0	10825	0.214	+			27854	MTGSSAPCK	9	74	441.19593097131974	880.3773090094395	2	441.1960754394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MTGSSAPCK_	ENST00000392001.6_1_2:238499129-238499162:-|nuORF	124.08010499294276	0.018729767491916592	4				NaN	NaN	0	NaN	2080	2409	4490
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4492	16.009	NaN	7634.4	30	0	899.12	0.106			+	-1	CLSTLTSNRSC	11	59	447.5359076367125	1339.5858935103377	3	447.5357971191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term),2 Carbamidomethyl (C)	_(Acetyl (Protein N-term))C(Carbamidomethyl (C))LSTLTSNRSC(Carbamidomethyl (C))_	REV__MADD|p.R168C|1|0.06|ENSG00000110514|chr11:47275002-47275002|C/T|missense_variant	32.03412808689991	0.6537793186749145	4				NaN	NaN	0	NaN	2081	2409	4490
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4493	16.012	NaN	736.98	30	0	156.26	0.106			+	-1	GICCPRGK	8	34	474.23209377462194	946.4496346160439	2	474.2322082519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_GIC(Carbamidomethyl (C))C(Carbamidomethyl (C))PRGK_	REV__ENSG00000129667|ENST00000675367|RHBDF2;REV__ENST00000590168.5_1_17:74469085-74473795:-|nuORF;REV__nc|ENSG00000129667|Q6PJF5|RHBDF2	20.481830146152948	0.8005983782650069	4				NaN	NaN	0	NaN	2082	2409	4490
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4494	16.013	NaN	1426.7	30	0	509.66	0.106			+	-1	AAIMKKAKE	9	28	335.8632980994921	1004.5680648986763	3	335.8633117675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_AAIM(Oxidation (M))KKAKE_	REV__ENSG00000183150|ENST00000651487|GPR19	29.14955571784316	0.5308295550522326	4				NaN	NaN	0	NaN	2083	2409	4490
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4495	16.015	NaN	6481.4	30	0	2068.7	0.106	+			39612	STHQAAIVSK	10	64	521.2877336669708	1040.5609144007415	2	521.2886352539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STHQAAIVSK_	ENSG00000122786|ENST00000361675|CALD1;ENST00000482470.5_1_7:134552484-134644871:+|nuORF;nc|ENSG00000122786|Q05682-2|CALD1;nc|ENSG00000122786|Q05682-3|CALD1;nc|ENSG00000122786|Q05682-4|CALD1;nc|ENSG00000122786|Q05682-5|CALD1;nc|ENSG00000122786|Q05682-6|CALD1	120.27252224102466	0.026944837168485097	4				NaN	NaN	0	NaN	2084	2409	4490
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4496	16.017	NaN	1547.2	30	0	411.56	0.032	+			4005	ATCFDAAQ	8	44	413.67515775767913	NaN	0	413.6750793457031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATCFDAAQ_	ENSG00000143333|ENST00000367558|RGS16;RGS16|p.T148I|1|0.44|ENSG00000143333|chr1:182600458-182600458|G/A|missense_variant	44.116797842482775	1.7418937515398478	4				NaN	NaN	0	NaN	2085	2409	4490
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4497	16.018	NaN	3244.5	30	0	868.81	0.141			+	37464	SLKAKARAPE	10	40	357.5487024412965	1069.6242779240895	3	357.548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SLKAKARAPE_	REV__AFF3|p.H452Tfs*21|1|0.14|ENSG00000144218|chr2:99601452-99601452|G/-|frameshift_variant;REV__AFF3|p.M875Cfs*22|1|0.25|ENSG00000144218|chr2:99582968-99582968|T/-|frameshift_variant;REV__AFF3|p.T616Rfs*30|1|0.17|ENSG00000144218|chr2:99593816-99593816|C/-|frameshift_variant;REV__ENSG00000144218|ENST00000672756|AFF3;REV__ENST00000498090.1_1_2:100623057-100623988:-|nuORF;REV__nc|ENSG00000144218|P51826-2|AFF3	36.446750945000026	0.5818864909973037	4				NaN	NaN	0	NaN	2086	2409	4490
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4515	16.057	NaN	9433.6	30	0	4663.6	0.214			+	29728	PHPARLVD	8	61	452.7534480898918	903.4923432465836	2	452.7532958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PHPARLVD_	REV__ENSG00000159788|ENST00000336727|RGS12;REV__ENST00000506998.5_1_4:3371967-3419414:+|nuORF;REV__ENST00000508158.5_1_4:3386893-3430067:+|nuORF;REV__nc|ENSG00000159788|O14924-2|RGS12;REV__nc|ENSG00000159788|O14924-3|RGS12;REV__nc|ENSG00000159788|O14924-4|RGS12;REV__nc|ENSG00000159788|O14924-5|RGS12;REV__nc|ENSG00000159788|O14924-6|RGS12;REV__nc|ENSG00000159788|O14924-7|RGS12;REV__RGS12|p.K1178Nfs*32|1|0.71|ENSG00000159788|chr4:3428672-3428672|A/-|frameshift_variant;REV__RGS12|p.K869Sfs*2|1|0.44|ENSG00000159788|chr4:3417086-3417086|A/-|frameshift_variant;REV__RGS12|p.N1124Hfs*23|1|0.3|ENSG00000159788|chr4:3428126-3428127|AG/-|frameshift_variant;REV__RGS12|p.Q1292Rfs*49|1|0.23|ENSG00000159788|chr4:3430704-3430704|C/-|frameshift_variant;REV__RGS12|p.Q1363Rfs*30|1|0.3|ENSG00000159788|chr4:3430923-3430923|C/-|frameshift_variant	33.51558372728122	0.7005509609380386	4				NaN	NaN	0	NaN	2101	2412	4514
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4516	16.061	NaN	4444.7	30	0	977.38	0.106				-1	ASAMQHVL	8	44	436.71811091083083	871.4216688884617	2	436.7181091308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_ASAM(Oxidation (M))QHVL_	ENSG00000083457|ENST00000263087|ITGAE;ITGAE|p.A480Lfs*87|1|0.48|ENSG00000083457|chr17:3753872-3753872|C/-|frameshift_variant;ITGAE|p.I909Lfs*19|1|0.09|ENSG00000083457|chr17:3732398-3732398|C/-|frameshift_variant;ITGAE|p.L601Pfs*8|1|0.31|ENSG00000083457|chr17:3751741-3751742|-/G|frameshift_variant	35.200714571348534	0.6875396545722289	4				NaN	NaN	0	NaN	2102	2412	4514
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4517	16.063	NaN	2573.3	30	0	539.42	0.106			+	3808	ATAGLLQQ	8	53	401.2268109198291	800.4390689064583	2	401.2267150878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATAGLLQQ_	REV__ATP8B3|p.T1172Rfs*12|1|0.27|ENSG00000130270|chr19:1785178-1785178|G/-|frameshift_variant;REV__ENSG00000130270|ENST00000310127|ATP8B3	53.351449002276354	0.5676011784961348	4				NaN	NaN	0	NaN	2103	2412	4514
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4518	16.064	NaN	2636.2	30	0	444.33	0.106			+	-1	EGALPRCR	8	60	479.7476017692382	957.4806506052764	2	479.74761962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_EGALPRC(Carbamidomethyl (C))R_	REV__CXXC4|p.H205R|1|0.17|ENSG00000168772|chr4:104491189-104491189|T/C|missense_variant	57.81127852772723	0.5234495074909924	4				NaN	NaN	0	NaN	2104	2412	4514
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4519	16.066	NaN	915.65	30	0	462.15	0.106				-1	EGMRRLAML	9	26	364.8596496582031	NaN	0	364.8596496582031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_EGMRRLAM(Oxidation (M))L_	ENSG00000112159|ENST00000369393|MDN1;MDN1|p.E2692*|2|0.32|ENSG00000112159|chr6:89706133-89706134|-/A|frameshift_variant;MDN1|p.F2691Lfs*7|2|0.37|ENSG00000112159|chr6:89706134-89706134|A/-|frameshift_variant;MDN1|p.K2642Nfs*17|2|0.29|ENSG00000112159|chr6:89707449-89707449|T/-|frameshift_variant;MDN1|p.L4077Cfs*15|1|0.16|ENSG00000112159|chr6:89680625-89680625|G/-|frameshift_variant;MDN1|p.L5278Ffs*6|1|0.18|ENSG00000112159|chr6:89652273-89652274|-/A|frameshift_variant	25.57405402267927	0.3484490411150625	4				NaN	NaN	0	NaN	2105	2412	4514
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4520	16.068	NaN	544.69	30	0	115.03	0.036			+	37167	SIVTAWAAGAI	11	28	530.2938842773438	NaN	0	530.2938842773438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SIVTAWAAGAI_	REV__tr|U7SU85|U7SU85_FUSNUMultidrugexportproteinMepAOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01059PE=3SV=1	26.69291269510374	0.4464570093767436	4				NaN	NaN	0	NaN	2106	2412	4514
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4521	16.069	NaN	1090.2	30	0	54.409	0.139	+			22563	KTSNGSLGV	9	54	431.7346496582031	NaN	0	431.7346496582031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KTSNGSLGV_	ENST00000418978.5_1_16:258158-278359:-|nuORF	32.81241826257853	0.3119040447479903	4				NaN	NaN	0	NaN	2107	2412	4514
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4539	16.107	NaN	3515.1	30	0	443.28	0.214	+			39275	STAREAIEK	9	63	502.7727158898042	1003.5308788464084	2	502.7727355957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STAREAIEK_	ENSG00000185024|ENST00000547530|BRF1;ENST00000547374.5_1_14:105678371-105685686:-|nuORF;nc|ENSG00000185024|Q92994-3|BRF1;nc|ENSG00000185024|Q92994-5|BRF1;nc|ENSG00000185024|Q92994-7|BRF1;nc|ENSG00000185024|Q92994-8|BRF1;nc|ENSG00000185024|Q92994-9|BRF1	76.16968421966216	0.11411088698345859	4				NaN	NaN	0	NaN	2122	2415	4538
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4540	16.111	NaN	1666.9	30	0	503.38	0.106			+	31631	QMKKQEKK	8	44	524.3034057617188	NaN	0	524.3034057617188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QMKKQEKK_	REV__CEP350|p.R2078M|1|0.38|ENSG00000135837|chr1:180084126-180084126|G/T|missense_variant	40.77816245573522	1.7418937515398478	4				NaN	NaN	0	NaN	2123	2415	4538
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4541	16.113	NaN	30874	30	0	9605.4	0.106	+			18519	ISKSCRLKK	9	63	354.88525364721704	1061.633931541851	3	354.8856506347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ISKSCRLKK_	ENST00000476275.5_1_1:78046613-78098535:-|nuORF;nc|ENSG00000036549|Q8IYH5-4|ZZZ3	69.6276240434122	0.14239879520340665	4				NaN	NaN	0	NaN	2124	2415	4538
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4542	16.114	NaN	6335.8	30	0	4245.6	0.106			+	17175	HTPLAVAAF	9	57	463.75661080708477	925.4986686809696	2	463.7564697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HTPLAVAAF_	REV__ENST00000474298.5_1_2:85097899-85133968:-|nuORF;REV__ENST00000489999.1_1_2:85128926-85133968:-|nuORF	60.29395666154354	0.21116425950210296	4				NaN	NaN	0	NaN	2125	2415	4538
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4543	16.116	NaN	886.54	30	0	251.75	0.106	+			26466	LTKALFLAL	9	28	330.550048828125	NaN	0	330.550048828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LTKALFLAL_	ENSG00000166377|ENST00000426216|ATP9B;ENST00000585674.1_1_18:76966984-77037243:+|nuORF;ENST00000586366.5_1_18:76967000-77013542:+|nuORF;nc|ENSG00000166377|O43861-2|ATP9B	10.265252068803164	0.4022383999429647	4				NaN	NaN	0	NaN	2126	2415	4538
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4544	16.118	NaN	2491.3	30	0	610.56	0.035	+			12962	GETESKRAL	9	45	495.7659783182861	NaN	0	495.76495361328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GETESKRAL_	ENSG00000197321|ENST00000355867|SVIL;nc|ENSG00000197321|O95425-2|SVIL;nc|ENSG00000197321|O95425-3|SVIL;nc|ENSG00000197321|O95425-4|SVIL;SVIL|p.M1863Dfs*18|1|0.28|ENSG00000197321|chr10:29471186-29471187|-/C|frameshift_variant;SVIL|p.M1863Wfs*44|8|0.39|ENSG00000197321|chr10:29471187-29471187|C/-|frameshift_variant;SVIL|p.N2095Kfs*36|1|0.25|ENSG00000197321|chr10:29462394-29462395|-/T|frameshift_variant	71.87747018426188	0.0992163553043454	4				NaN	NaN	0	NaN	2127	2415	4538
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4562	16.156	NaN	9774.3	30	0	1498.1	0.215	+			4094	ATDPKAIGH	9	66	455.2432095312139	908.4718661292278	2	455.24334716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATDPKAIGH_	ENSG00000117410|ENST00000472174|ATP6V0B;ENST00000496131.1_1_1:44442124-44442513:+|nuORF;nc|ENSG00000117410|Q99437-2|ATP6V0B	148.04295825190792	0.0073252839830139265	4				NaN	NaN	0	NaN	2142	2418	4561
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4563	16.159	NaN	4601	30	0	1028.9	0.106	+			1295	AESPHPPV	8	46	417.21282334931084	832.4110937654217	2	417.2131652832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AESPHPPV_	TRIM72|p.P257Hfs*28|1|0.49|ENSG00000177238|chr16:31222852-31222852|C/-|frameshift_variant	44.53106598305862	0.628196326904373	4				NaN	NaN	0	NaN	2143	2418	4561
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4564	16.161	NaN	7624.6	30	0	2408.8	0.106	+			15299	GTVDKKMVEK	10	72	378.8779602050781	NaN	0	378.8779602050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTVDKKMVEK_	CBL|p.L272*|1|0.25|ENSG00000110395|chr11:119274894-119274894|T/-|frameshift_variant;CBL|p.V581Cfs*4|1|0.08|ENSG00000110395|chr11:119285359-119285360|-/C|frameshift_variant;ENSG00000110395|ENST00000264033|CBL	88.17693792209575	0.06076230397739847	4				NaN	NaN	0	NaN	2144	2418	4561
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4565	16.163	NaN	4336.3	30	0	978.76	0.106	+			15589	GVHLRPAG	8	55	403.7362430380501	805.4579331429002	2	403.9071044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GVHLRPAG_	ENST00000342115.8_1_1:110162645-110168822:+|nuORF;ENST00000528667.5_1_1:110162570-110163847:+|nuORF	23.036711822280957	0.7814608874307191	4				NaN	NaN	0	NaN	2145	2418	4561
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4566	16.165	NaN	4559.6	30	0	1393.9	0.106				-1	 	0	51	340.2103748477452	678.4061967622904	2	340.21063232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2146	2418	4561
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4567	16.167	NaN	3688.8	30	0	884.09	0.033	+			44330	TSGEPATPK	9	55	444.2269089503064	886.4392649674128	2	444.2274475097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TSGEPATPK_	nc|ENSG00000224287|P0C860|MSL3B	65.46538089061403	0.16805504838372562	4				NaN	NaN	0	NaN	2147	2418	4561
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4568	16.167	NaN	1343.1	30	0	167.37	0.137			+	24586	LGPPLARA	8	43	397.74755859375	NaN	0	397.74755859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LGPPLARA_	REV__ENST00000368605.2_1_6:116783229-116784525:+|nuORF	14.664097394203935	1.7418937515398478	4				NaN	NaN	0	NaN	2148	2418	4561
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4586	16.206	NaN	9104.3	30	0	2270.2	0.214	+			29201	NVNEPATTK	9	65	487.2506377910451	972.4867226488902	2	487.2506103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NVNEPATTK_	ENSG00000116906|ENST00000366647|GNPAT;nc|ENSG00000116906|O15228-2|GNPAT	104.01359247289065	0.03510646158778409	4				NaN	NaN	0	NaN	2163	2421	4585
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4587	16.21	NaN	8611	30	0	2376.5	0.106	+			41709	SVSDPGQAR	9	59	458.7275383960358	915.4405238588716	2	458.7273254394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVSDPGQAR_	nc|ENSG00000157800|Q8NCC5-3|SLC37A3	75.04331003522576	0.118981335847003	4				NaN	NaN	0	NaN	2164	2421	4585
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4588	16.212	NaN	1334.9	30	0	156.28	0.106	+			21960	KSCDAAAAVAK	11	51	546.2796449674057	NaN	0	546.2797241210938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_KSC(Carbamidomethyl (C))DAAAAVAK_	CACUL1|p.K186Rfs*2|1|0.24|ENSG00000151893|chr10:118729335-118729335|T/-|frameshift_variant;ENSG00000151893|ENST00000369151|CACUL1;nc|ENSG00000151893|Q86Y37-2|CACUL1	70.39856735676683	0.1329709818163533	4				NaN	NaN	0	NaN	2165	2421	4585
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4589	16.214	NaN	5270.8	30	0	804.32	0.106	+			16623	HGVGAPLR	8	61	403.7362430380501	805.4579331429002	2	403.7351379394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HGVGAPLR_	ENST00000470714.5_1_7:99933771-99935846:+|nuORF	77.94384346573518	0.3407065481025094	4				NaN	NaN	0	NaN	2166	2421	4585
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4590	16.216	NaN	6822.4	30	0	1540.4	0.106	+			41781	SVSPVKATQK	10	71	522.8058014799634	1043.5970500267267	2	522.806396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVSPVKATQK_	ENSG00000139354|ENST00000547754|GAS2L3	89.02883481214508	0.13663399911061233	4				NaN	NaN	0	NaN	2167	2421	4585
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4591	16.218	NaN	3355.6	30	0	1004.7	0.106			+	30340	PTTDVKKG	8	43	423.2398074957327	844.4650620582654	2	423.2396545410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PTTDVKKG_	REV__ENSG00000125844|ENST00000377813|RRBP1;REV__RRBP1|p.A628Gfs*69|1|0.35|ENSG00000125844|chr20:17621915-17621916|-/T|frameshift_variant	30.503639358989545	0.7238069182250283	4				NaN	NaN	0	NaN	2168	2421	4585
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4592	16.219	NaN	1462.3	30	0	223.52	0.039	+			51198	YPLLPLYPER	10	50	420.9039611816406	NaN	0	420.9039611816406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YPLLPLYPER_	FMN2|p.P1098Lfs*177|1|0.41|ENSG00000155816|chr1:240208101-240208101|C/-|frameshift_variant	28.081489160057373	0.40797012399963245	4				NaN	NaN	0	NaN	2169	2421	4585
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4610	16.257	NaN	305920	30	0	111710	0.209				-1	 	0	99	418.2293404101741	834.4441278871482	2	418.2293395996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2184	2424	4609
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4611	16.261	NaN	8516.1	30	0	1077.5	0.106	+			40247	STSHVSISK	9	75	473.2532377745575	NaN	0	473.2532043457031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STSHVSISK_	ENSG00000215182|ENST00000621226|MUC5AC;MUC5AC|p.R4729Efs*5|1|0.24|ENSG00000215182|chr11:1192325-1192325|C/-|frameshift_variant	123.20810148215591	0.0016355521601317592	4				NaN	NaN	0	NaN	2185	2424	4609
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4612	16.263	NaN	7221.4	30	0	703.93	0.106	+			40077	STNPKAALK	9	67	465.27413388797993	928.5337148427599	2	465.2741394042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STNPKAALK_	ENSG00000163125|ENST00000369068|RPRD2;ENST00000492220.1_1_1:150381497-150445807:+|nuORF;nc|ENSG00000163125|Q5VT52-2|RPRD2;nc|ENSG00000163125|Q5VT52-3|RPRD2;nc|ENSG00000163125|Q5VT52-5|RPRD2;RPRD2|p.G1389Efs*24|1|0.39|ENSG00000163125|chr1:150473110-150473110|G/-|frameshift_variant;RPRD2|p.K249Sfs*6|1|0.36|ENSG00000163125|chr1:150446274-150446274|C/-|frameshift_variant;RPRD2|p.L1399Wfs*14|2|0.26|ENSG00000163125|chr1:150473136-150473136|C/-|frameshift_variant;RPRD2|p.P1275Lfs*138|1|0.15|ENSG00000163125|chr1:150472768-150472768|C/-|frameshift_variant;RPRD2|p.P733Hfs*4|1|0.43|ENSG00000163125|chr1:150471145-150471146|CC/-|frameshift_variant;RPRD2|p.P772Lfs*42|2|0.19|ENSG00000163125|chr1:150471259-150471259|C/-|frameshift_variant;RPRD2|p.T1353Pfs*60|1|0.13|ENSG00000163125|chr1:150473001-150473001|C/-|frameshift_variant	85.16082228582465	0.07850854922700509	4				NaN	NaN	0	NaN	2186	2424	4609
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4613	16.264	NaN	4492.5	30	0	632.72	0.106	+			13277	GIVGEKSQ	8	56	409.2241789246516	816.4338049161032	2	409.2240905761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GIVGEKSQ_	ENST00000360264.7_1_7:101898640-101898772:+|nuORF	79.45101966838831	0.3281480470254892	4				NaN	NaN	0	NaN	2187	2424	4609
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4614	16.266	NaN	1115.2	30	0	506.91	0.106			+	-1	IAESLSCLL	9	30	335.84661865234375	NaN	0	335.84661865234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_IAESLSC(Carbamidomethyl (C))LL_	REV__ENSG00000015520|ENST00000381160|NPC1L1;REV__nc|ENSG00000015520|Q9UHC9-2|NPC1L1;REV__nc|ENSG00000015520|Q9UHC9-4|NPC1L1;REV__nc|ENSG00000015520|Q9UHC9|NPC1L1	26.69291269510374	0.34280015626154364	4				NaN	NaN	0	NaN	2188	2424	4609
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4615	16.268	NaN	640.43	30	0	88.369	0.106				-1	 	0	38	382.74163818359375	NaN	0	382.74163818359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2189	2424	4609
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4616	16.27	NaN	3306.8	30	0	377.51	0.039				-1	VAAAHKVC	8	51	428.2296757984265	NaN	0	428.2296142578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_VAAAHKVC(Carbamidomethyl (C))_	ENSG00000183134|ENST00000332539|PTGDR2	21.70233525837049	1.7418937515398478	4				NaN	NaN	0	NaN	2190	2424	4609
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4634	16.307	NaN	38343	30	0	5676.2	0.214			+	33909	RRSGSATPPS	10	86	508.26743886615657	1014.5203247991132	2	508.2674560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RRSGSATPPS_	REV__ENST00000315367.3_1_8:96146046-96166295:+|nuORF	63.53385203322761	0.33370026130094593	4				NaN	NaN	0	NaN	2205	2427	4633
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4635	16.31	NaN	32299	30	0	7472.1	0.106	+			22949	KVQSKVNLK	9	72	522.3319149247669	1042.6492769163337	2	522.33251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVQSKVNLK_	DYNC1H1|p.F2635Lfs*67|1|0.16|ENSG00000197102|chr14:102017141-102017141|T/-|frameshift_variant;DYNC1H1|p.G1902Vfs*27|2|0.27|ENSG00000197102|chr14:102006154-102006154|G/-|frameshift_variant;DYNC1H1|p.K3112Hfs*3|1|0.31|ENSG00000197102|chr14:102027998-102027999|-/TCACAAG|frameshift_variant;DYNC1H1|p.W4201Gfs*43|1|0.42|ENSG00000197102|chr14:102043958-102043958|G/-|frameshift_variant;ENSG00000197102|ENST00000360184|DYNC1H1	176.44474024533739	0.0016668318535579616	4				NaN	NaN	0	NaN	2206	2427	4633
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4636	16.312	NaN	1185.6	30	0	304.64	0.106			+	18971	IVRPLGGLAG	10	41	476.8003845214844	NaN	0	476.8003845214844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IVRPLGGLAG_	REV__ENSG00000125434|ENST00000577745|SLC25A35;REV__nc|ENSG00000125434|Q3KQZ1-2|SLC25A35;REV__nc|ENSG00000125434|Q3KQZ1-3|SLC25A35;REV__nc|ENSG00000125434|Q3KQZ1-4|SLC25A35	27.882242232435846	0.4086243523356342	4				NaN	NaN	0	NaN	2207	2427	4633
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4637	16.314	NaN	5372.8	30	0	1308.6	0.106	+			45994	VATTQSPT	8	52	402.7082757594214	803.4019985856428	2	402.7084045410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VATTQSPT_	ENSG00000136153|ENST00000377534|LMO7;ENST00000482116.1_1_13:76423246-76430812:+|nuORF;nc|ENSG00000136153|Q8WWI1-2|LMO7;nc|ENSG00000136153|Q8WWI1-3|LMO7;nc|ENSG00000136153|Q8WWI1-4|LMO7;nc|ENSG00000136153|Q8WWI1-5|LMO7;nc|ENSG00000136153|Q8WWI1|LMO7	82.30502934623384	0.30436709589983096	4				NaN	NaN	0	NaN	2208	2427	4633
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4638	16.316	NaN	3338.1	30	0	934.29	0.106	+			20873	KINKAIVSK	9	58	500.8293151855469	NaN	0	500.8293151855469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KINKAIVSK_	ENSG00000135919|ENST00000409304|SERPINE2;nc|ENSG00000135919|P07093-3|SERPINE2;nc|ENSG00000135919|P07093|SERPINE2;SERPINE2|p.I345Nfs*2|1|0.33|ENSG00000135919|chr2:223980352-223980353|-/T|frameshift_variant	93.5975768576971	0.03434413464716124	4				NaN	NaN	0	NaN	2209	2427	4633
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4639	16.318	NaN	3789.8	30	0	1622.6	0.037	+			42096	SYIIRNPQQ	9	38	373.5376281738281	NaN	0	373.5376281738281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SYIIRNPQQ_	ENSG00000104517|ENST00000520539|UBR5;ENST00000519528.1_1_8:103299768-103305927:-|nuORF;nc|ENSG00000104517|O95071-2|UBR5;UBR5|p.E2121Kfs*28|1|0.39|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant;UBR5|p.E2121Rfs*13|1|0.28|ENSG00000104517|chr8:102277120-102277121|-/T|frameshift_variant;UBR5|p.F2571Lfs*4|2|0.31|ENSG00000104517|chr8:102262044-102262044|A/-|frameshift_variant;UBR5|p.K2120Rfs*13|1|0.24|ENSG00000104517|chr8:102277121-102277122|TT/-|frameshift_variant	21.9598887501803	0.3626577482100488	4				NaN	NaN	0	NaN	2210	2427	4633
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4640	16.319	NaN	1645.2	30	0	230.99	0.14	+			34728	RVYGQPSTK	9	54	518.2822669219266	1034.5499809106532	2	518.2833862304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RVYGQPSTK_	ENSG00000171206|ENST00000643721|TRIM8	37.81151784470057	0.4459294069877048	4				NaN	NaN	0	NaN	2211	2427	4633
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4659	16.357	NaN	10997	30	0	4205.2	0.214	+			3426	ASQKVTISK	9	74	481.28724783534614	960.5599427374923	2	481.28704833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASQKVTISK_	CACUL1|p.Y368Tfs*100|1|0.52|ENSG00000151893|chr10:118686137-118686137|C/-|frameshift_variant;ENST00000369151.7_1_10:120445350-120445566:-|nuORF	166.0711670676379	0.003437550387609957	4				NaN	NaN	0	NaN	2227	2430	4658
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4660	16.36	NaN	17468	30	0	8207	0.106				-1	 	0	84	352.56913448734963	1054.6855740622489	3	352.5692138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2228	2430	4658
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4661	16.362	NaN	6413.4	30	0	1075.9	0.106	+			3109	ASGPRPTYK	9	68	488.7637936787876	975.5130344243752	2	488.7640075683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASGPRPTYK_	ENSG00000117335|ENST00000367042|CD46;nc|ENSG00000117335|P15529-10|CD46;nc|ENSG00000117335|P15529-16|CD46;nc|ENSG00000117335|P15529-2|CD46;nc|ENSG00000117335|P15529-3|CD46;nc|ENSG00000117335|P15529-8|CD46;nc|ENSG00000117335|P15529|CD46	82.7504851949679	0.08565546331141553	4				NaN	NaN	0	NaN	2229	2430	4658
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4662	16.364	NaN	2997.9	30	0	375.98	0.106	+			32672	RADPQRAV	8	59	456.7539015507081	911.4932501682163	2	456.7541198730469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RADPQRAV_	ENSG00000168061|ENST00000652489|SAC3D1;ENST00000530213.5_1_11:64808530-64811777:+|nuORF;nc|ENSG00000168061|A6NKF1-2|SAC3D1;nc|ENSG00000168061|A6NKF1|SAC3D1;SAC3D1|p.C371Afs*4|1|0.08|ENSG00000168061|chr11:65044622-65044622|G/-|frameshift_variant	30.503639358989545	0.7238069182250283	4				NaN	NaN	0	NaN	2230	2430	4658
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4663	16.366	NaN	1525.3	30	0	400.02	0.106	+			14616	GTGKNFVSK	9	46	469.2582092285156	NaN	0	469.2582092285156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTGKNFVSK_	ENSG00000136827|ENST00000351698|TOR1A;ENST00000473084.1_1_9:132584712-132586364:-|nuORF;ENST00000473604.2_1_9:132580793-132585603:-|nuORF;nc|ENSG00000136827|O14656-2|TOR1A	75.04331003522576	0.0883683072398826	4				NaN	NaN	0	NaN	2231	2430	4658
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4664	16.368	NaN	19099	30	0	6847.2	0.036	+			4016	ATCSRVLNK	9	53	350.1901844623172	1047.5487239871516	3	350.1904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_ATC(Carbamidomethyl (C))SRVLNK_	ENSG00000176853|ENST00000334705|FAM91A1	42.86426827375447	0.38666266728046506	4				NaN	NaN	0	NaN	2232	2430	4658
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4665	16.368	NaN	2564.8	30	0	379.22	0.14	+			27638	MPQGGGQHY	9	62	495.70831489779164	989.4020768623833	2	495.7081604003906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_M(Oxidation (M))PQGGGQHY_	ENSG00000141380|ENST00000415083|SS18;nc|ENSG00000141380|Q15532-2|SS18	85.35947970620816	0.07794846947388434	4				NaN	NaN	0	NaN	2233	2430	4658
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4683	16.406	NaN	13659	30	0	3748.6	0.214	+			14139	GSMKENISK	9	76	497.25503609190827	992.4955192506166	2	497.2550048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSMKENISK_	ENSG00000038358|ENST00000358933|EDC4;nc|ENSG00000038358|Q6P2E9-2|EDC4	145.46060221211434	0.007927189773590037	4				NaN	NaN	0	NaN	2248	2433	4682
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4684	16.41	NaN	25876	30	0	7133.9	0.106	+			23123	KVVVSPTK	8	67	429.27636892470616	856.5381849162123	2	429.27606201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVVVSPTK_	ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232323706-232327997:-|nuORF	141.52041321563706	0.2636916070418133	4				NaN	NaN	0	NaN	2249	2433	4682
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4685	16.412	NaN	4347	30	0	1104.7	0.106	+			34136	RSTVPTPAK	9	59	478.77940583510923	955.5442587370185	2	479.27734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RSTVPTPAK_	ENSG00000173848|ENST00000355029|NET1;ENST00000486354.1_1_10:5488686-5494790:+|nuORF;nc|ENSG00000173848|Q7Z628-2|NET1	64.20726635412375	0.17854274437659667	4				NaN	NaN	0	NaN	2250	2433	4682
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4686	16.414	NaN	19571	30	0	5026.2	0.106	+			5255	ATVDKTVCK	9	81	482.75983865502303	963.5051243768461	2	482.7599792480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATVDKTVCK_	ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1670Tfs*23|1|0.29|ENSG00000174231|chr17:1659487-1659487|C/-|frameshift_variant	177.3047273071476	0.0015666121956477066	4				NaN	NaN	0	NaN	2251	2433	4682
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4687	16.416	NaN	2962	30	0	720.07	0.106	+			356	AAQKNMALK	9	37	325.5198974609375	NaN	0	325.5198974609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AAQKNMALK_	ENSG00000100345|ENST00000216181|MYH9;SYNDIG1-MYH9|1|fusion	50.0245360154114	0.20652386741182333	4				NaN	NaN	0	NaN	2252	2433	4682
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4688	16.417	NaN	907.09	30	0	104.05	0.035				-1	KRCALCRQ	8	43	517.7730712890625	NaN	0	517.7730712890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_KRCALC(Carbamidomethyl (C))RQ_	ENSG00000118518|ENST00000368314|RNF146;nc|ENSG00000118518|Q9NTX7-2|RNF146	35.200714571348534	1.7418937515398478	4				NaN	NaN	0	NaN	2253	2433	4682
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4689	16.418	NaN	1895.1	30	0	324.92	0.144	+			34537	RVIKLAHAK	9	43	345.89749865066113	NaN	0	345.8975524902344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RVIKLAHAK_	ENSG00000112282|ENST00000368068|MED23;MED23|p.F896Lfs*5|1|0.27|ENSG00000112282|chr6:131596608-131596608|A/-|frameshift_variant;MED23|p.H1213Mfs*26|1|0.32|ENSG00000112282|chr6:131591362-131591362|G/-|frameshift_variant;MED23|p.T545I|1|0.21|ENSG00000112282|chr6:131604300-131604300|G/A|missense_variant;nc|ENSG00000112282|Q9ULK4-2|MED23;nc|ENSG00000112282|Q9ULK4-3|MED23;nc|ENSG00000112282|Q9ULK4-4|MED23;nc|ENSG00000112282|Q9ULK4-5|MED23	46.45678178249821	0.2311111838007999	4				NaN	NaN	0	NaN	2254	2433	4682
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4707	16.457	NaN	10372	30	0	1264.3	0.214	+			34033	RSLDTHVTK	9	80	528.7934215618637	1055.5722901905274	2	528.7940063476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RSLDTHVTK_	ENSG00000100304|ENST00000216129|TTLL12	78.26377905018397	0.10505600812668463	4				NaN	NaN	0	NaN	2269	2436	4706
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4708	16.46	NaN	12252	30	0	3877.2	0.106			+	14271	GSVCTEKLK	9	49	322.17584346500723	NaN	0	322.1758117675781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSVCTEKLK_	REV__AKAP12|p.E1404Rfs*18|1|0.17|ENSG00000131016|chr6:151352600-151352600|G/-|frameshift_variant;REV__AKAP12|p.N1461Mfs*26|1|0.52|ENSG00000131016|chr6:151352767-151352767|A/-|frameshift_variant;REV__AKAP12|p.P1160Lfs*18|3|0.22|ENSG00000131016|chr6:151351865-151351865|C/-|frameshift_variant;REV__ENSG00000131016|ENST00000402676|AKAP12;REV__nc|ENSG00000131016|Q02952-2|AKAP12;REV__nc|ENSG00000131016|Q02952-3|AKAP12	37.15910966729921	0.2899585034171616	4				NaN	NaN	0	NaN	2270	2436	4706
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4709	16.462	NaN	3320.8	30	0	569.24	0.106	+			12063	GAAGPVCSK	9	48	395.19957976957414	788.3846066059483	2	395.19976806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GAAGPVCSK_	ENST00000395863.7_1_20:55841273-55841597:-|nuORF	56.72105179125745	0.24094814563026265	4				NaN	NaN	0	NaN	2271	2436	4706
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4710	16.464	NaN	1849	30	0	387.47	0.106	+			23046	KVTDTASMK	9	52	490.75726318359375	NaN	0	490.75726318359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KVTDTASMK_	ENSG00000121316|ENST00000240617|PLBD1	43.650786325866115	0.2504488100985368	4				NaN	NaN	0	NaN	2272	2436	4706
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4711	16.466	NaN	9330.1	30	0	3088.5	0.106			+	14120	GSLPVCQLTY	10	75	540.7743756690268	1079.5341984048534	2	541.2949829101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GSLPVCQLTY_	REV__ENSG00000204740|ENST00000454679|MALRD1	36.446750945000026	0.5818864909973037	4				NaN	NaN	0	NaN	2273	2436	4706
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4712	16.468	NaN	11213	30	0	5366.3	0.036	+			16782	HPAENGKSNF	10	60	550.7581016972301	1099.5016504612602	2	551.261962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HPAENGKSNF_	B2M|p.V69Sfs*21|1|0.67|ENSG00000166710|chr15:44715554-44715555|-/A|frameshift_variant;B2M|p.V69Wfs*34|1|0.32|ENSG00000166710|chr15:44715555-44715555|A/-|frameshift_variant;B2M|p.Y98Lfs*5|1|0.08|ENSG00000166710|chr15:44715648-44715648|A/-|frameshift_variant;ENSG00000166710|ENST00000648006|B2M;ENST00000559720.5_1_15:45003705-45007919:+|nuORF	80.45461616416974	0.1919067876629769	4				NaN	NaN	0	NaN	2274	2436	4706
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4713	16.468	NaN	273.33	30	0	30.531	0.141	+			24997	LLEQVTIFL	9	22	538.3233032226562	NaN	0	538.3233032226562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LLEQVTIFL_	ENST00000483443.1_1_2:238664770-238678725:+|nuORF	11.511019455917149	0.3980220838287494	4				NaN	NaN	0	NaN	2275	2436	4706
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4731	16.508	NaN	26166	30	0	5563.3	0.214	+			37025	SIQRKLQEK	9	78	377.22752928151726	1128.6607584447518	3	377.2275695800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIQRKLQEK_	ENSG00000138640|ENST00000264344|FAM13A;ENST00000508360.5_1_4:89653076-89671014:-|nuORF;ENST00000511573.5_1_4:89649686-89680064:-|nuORF;nc|ENSG00000138640|O94988-1|FAM13A;nc|ENSG00000138640|O94988-3|FAM13A;nc|ENSG00000138640|O94988-5|FAM13A;nc|ENSG00000138640|O94988-6|FAM13A	138.06239232086	0.011389075116295402	4				NaN	NaN	0	NaN	2290	2439	4730
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4732	16.511	NaN	3079.7	30	0	375.24	0.106	+			39271	STAQRVTYK	9	59	527.2878845960818	1052.5612162589634	2	527.2883911132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STAQRVTYK_	ENSG00000126226|ENST00000337344|PCID2;nc|ENSG00000126226|Q5JVF3-2|PCID2;nc|ENSG00000126226|Q5JVF3-3|PCID2;nc|ENSG00000126226|Q5JVF3-4|PCID2	131.61620852596164	0.014413238321579053	4				NaN	NaN	0	NaN	2291	2439	4730
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4733	16.513	NaN	8990.9	30	0	4106.4	0.106	+			32486	QVNGGTVAEK	10	70	501.76407496897446	1001.5135970047489	2	501.7639465332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QVNGGTVAEK_	ENSG00000100316|ENST00000216146|RPL3;ENST00000413027.1_1_6:31248141-31248948:+|nuORF	120.30596017624542	0.026897611020491978	4				NaN	NaN	0	NaN	2292	2439	4730
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4734	16.515	NaN	3223.9	30	0	524.83	0.106	+			5256	ATVDKTVCK	9	64	482.75983865502303	963.5051243768461	2	483.26129150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATVDKTVCK_	ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1670Tfs*23|1|0.29|ENSG00000174231|chr17:1659487-1659487|C/-|frameshift_variant	79.71258880314673	0.09879134589249085	4				NaN	NaN	0	NaN	2293	2439	4730
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4735	16.517	NaN	3886.8	30	0	868.48	0.106			+	32195	QSVELPRK	8	58	478.77940583510923	955.5442587370185	2	478.7790832519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QSVELPRK_	REV__ENSG00000060656|ENST00000373779|PTPRU;REV__nc|ENSG00000060656|Q92729-3|PTPRU;REV__nc|ENSG00000060656|Q92729-4|PTPRU;REV__nc|ENSG00000060656|Q92729|PTPRU;REV__PTPRU|p.G852Afs*35|1|0.26|ENSG00000060656|chr1:29303898-29303898|G/-|frameshift_variant;REV__PTPRU|p.S732N|1|0.42|ENSG00000060656|chr1:29284746-29284746|G/A|missense_variant	133.8126618989323	0.23527224284755519	4				NaN	NaN	0	NaN	2294	2439	4730
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4736	16.519	NaN	20363	30	0	5993.1	0.037	+			4147	ATEQPLTAKK	10	63	362.8764506785093	1085.607522635728	3	362.8763427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATEQPLTAKK_	ENSG00000120725|ENST00000394817|SIL1	38.753607047826485	0.5606299674732264	4				NaN	NaN	0	NaN	2295	2439	4730
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4737	16.519	NaN	3870.3	30	0	717.12	0.139	+			23044	KVTDPSVAK	9	51	472.77391910842607	943.5332852836522	2	472.77362060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KVTDPSVAK_	ENSG00000198408|ENST00000361464|OGA;nc|ENSG00000198408|O60502-2|OGA;nc|ENSG00000198408|O60502-4|OGA	109.47833844074708	0.029530294723441826	4				NaN	NaN	0	NaN	2296	2439	4730
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4754	16.556	NaN	23104	30	0	2549.7	0.214	+			34232	RTGDGIVQK	9	76	487.27461236077573	972.5346717883515	2	487.2746276855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTGDGIVQK_	ENSG00000152818|ENST00000367545|UTRN;nc|ENSG00000152818|P46939-2|UTRN;UTRN|p.G3160*|1|0.03|ENSG00000152818|chr6:144821001-144821002|AG/-|frameshift_variant;UTRN|p.R3003Pfs*5|1|0.27|ENSG00000152818|chr6:144793915-144793916|-/C|frameshift_variant;UTRN|p.T2422Hfs*35|1|0.47|ENSG00000152818|chr6:144557282-144557282|A/-|frameshift_variant	109.47833844074708	0.029530294723441826	4				NaN	NaN	0	NaN	2310	2442	4753
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4755	16.56	NaN	5184.9	30	0	1203.8	0.106	+			51243	YQHDDGRV	8	50	495.2259809054353	988.4374088776706	2	495.2258605957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YQHDDGRV_	ENSG00000197045|ENST00000358056|GMFB	27.882242232435846	0.7440473649773525	4				NaN	NaN	0	NaN	2311	2442	4753
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4756	16.562	NaN	2840.9	30	0	615.71	0.106			+	1497	AFSSLKCLG	9	41	463.2459986678134	NaN	0	463.2460021972656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AFSSLKCLG_	REV__ENSG00000170128|ENST00000304244|GPR25	44.116797842482775	0.2472372736944149	4				NaN	NaN	0	NaN	2312	2442	4753
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4757	16.564	NaN	4085.3	30	0	1073	0.106	+			5689	AVEGPSEAK	9	55	444.2269089503064	886.4392649674128	2	444.2266845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVEGPSEAK_	ENSG00000196924|ENST00000369850|FLNA;ENST00000490936.5_1_X:153579531-153588003:-|nuORF;FLNA|p.G2237Efs*109|1|0.28|ENSG00000196924|chrX:154352240-154352240|C/-|frameshift_variant;FLNA|p.Q1716Sfs*23|2|0.38|ENSG00000196924|chrX:154354896-154354896|G/-|frameshift_variant;FLNA|p.R2520Vfs*16|1|0.7|ENSG00000196924|chrX:154349560-154349560|G/-|frameshift_variant;nc|ENSG00000196924|P21333-2|FLNA	79.71258880314673	0.09879134589249085	4				NaN	NaN	0	NaN	2313	2442	4753
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4758	16.566	NaN	4847.5	30	0	1194.9	0.106	+			38861	SSNSSPIGK	9	50	438.7246229613817	875.4346929895635	2	438.7242736816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSNSSPIGK_	ENSG00000080345|ENST00000444746|RIF1;nc|ENSG00000080345|Q5UIP0-2|RIF1	72.2432373244024	0.13108886737667413	4				NaN	NaN	0	NaN	2314	2442	4753
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4759	16.567	NaN	1069.9	30	0	511.95	0.106			+	39103	SSSVVTLPAH	10	29	333.18170848116677	996.5232960437004	3	333.5416259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSSVVTLPAH_	REV__ENSG00000147650|ENST00000276654|LRP12;REV__LRP12|p.C451Afs*37|2|0.28|ENSG00000147650|chr8:104497201-104497201|A/-|frameshift_variant;REV__nc|ENSG00000147650|Q9Y561-2|LRP12	28.081489160057373	0.6505064946289502	4				NaN	NaN	0	NaN	2315	2442	4753
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4760	16.569	NaN	1389.7	30	0	414.21	0.036	+			30401	PVSQTPSSGQV	11	38	543.7751035245454	NaN	0	543.7752075195312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PVSQTPSSGQV_	ENSG00000152520|ENST00000380958|PAN3;ENST00000503791.5_1_13:28712794-28846220:+|nuORF;nc|ENSG00000152520|Q58A45-2|PAN3;nc|ENSG00000152520|Q58A45-3|PAN3;nc|ENSG00000152520|Q58A45-4|PAN3	27.64392233501311	0.4422187622456888	4				NaN	NaN	0	NaN	2316	2442	4753
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4778	16.606	NaN	11693	30	0	1135	0.214	+			31197	QGQLTKEL	8	76	458.75841471345575	915.5022764937115	2	458.7582702636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QGQLTKEL_	ENSG00000169203|ENST00000550665|NPIPB12;ENSG00000185864|ENST00000682606|NPIPB4;ENSG00000198064|ENST00000697092|NPIPB13;ENSG00000224712|ENST00000531598|NPIPA3;ENSG00000243716|ENST00000424340|NPIPB5;ENSG00000254206|ENST00000698511|NPIPB11;ENSG00000254852|ENST00000529166|NPIPA2;ENSG00000255524|ENST00000683297|NPIPB8;nc|ENSG00000169246|Q92617-2|NPIPB3;nc|ENSG00000169246|Q92617-5|NPIPB3;nc|ENSG00000169246|Q92617-6|NPIPB3;nc|ENSG00000169246|Q92617|NPIPB3;nc|ENSG00000243716|C9JG80|NPIPB4	99.37495909608758	0.2510236104623939	4				NaN	NaN	0	NaN	2331	2445	4777
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4779	16.61	NaN	12140	30	0	5894.2	0.106	+			23009	KVSKELVEK	9	73	353.88477426995973	1058.6324934100792	3	353.885009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVSKELVEK_	ENSG00000125844|ENST00000377813|RRBP1;nc|ENSG00000125844|Q9P2E9-3|RRBP1;RRBP1|p.A628Gfs*69|1|0.35|ENSG00000125844|chr20:17621915-17621916|-/T|frameshift_variant	66.9202029811203	0.15592758990009112	4				NaN	NaN	0	NaN	2332	2445	4777
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4780	16.612	NaN	5271.4	30	0	575.03	0.106	+			19789	KEAPAPPKA	9	66	454.76349369498575	907.5124344567715	2	454.7633361816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEAPAPPKA_	ENSG00000198242|ENST00000422514|RPL23A;ENST00000399247.6_1_6:29694709-29694913:-|nuORF;ENST00000582736.1_1_17:27047023-27047984:+|nuORF;ENST00000606975.1_1_8:163470-182153:-|nuORF	93.5975768576971	0.05472259948179787	4				NaN	NaN	0	NaN	2333	2445	4777
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4781	16.613	NaN	3225.8	30	0	1535.2	0.106	+			28481	NGGNFSVGE	9	38	440.6930071461574	879.3714613591148	2	440.6925964355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NGGNFSVGE_	ENSG00000121270|ENST00000356608|ABCC11	20.94693142431847	0.6074874384046576	4				NaN	NaN	0	NaN	2334	2445	4777
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4782	16.615	NaN	236240	30	0	64021	0.106	+			38872	SSNSYAIKK	9	128	333.18170848116677	996.5232960437004	3	333.1820068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSNSYAIKK_	ENSG00000083845|ENST00000196551|RPS5;ENST00000599232.1_1_19:58906030-58906114:+|nuORF	89.02883481214508	0.06760336634167786	4				NaN	NaN	0	NaN	2335	2445	4777
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4783	16.617	NaN	3471.5	30	0	589.95	0.035			+	31421	QKLVSMRK	8	55	495.2998921451776	988.5852313571552	2	495.2996520996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QKLVSMRK_	REV__tr|U7SPU9|U7SPU9_FUSNUABCtransporterdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01710PE=4SV=1	62.107414245175825	0.4809183816468817	4				NaN	NaN	0	NaN	2336	2445	4777
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4784	16.618	NaN	1136.2	30	0	111.66	0.138			+	33635	RLVRKCKRQ	9	45	396.2472839355469	NaN	0	396.2472839355469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RLVRKCKRQ_	REV__ENST00000275364.7_1_7:2768712-2768916:-|nuORF	19.996771675451527	0.3693019437812985	4				NaN	NaN	0	NaN	2337	2445	4777
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4803	16.657	NaN	30497	30	0	13703	0.214			+	14319	GSYRGAGRR	9	81	327.17823636300574	978.5128796892172	3	327.1783142089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSYRGAGRR_	REV__ENST00000465980.1_1_3:112262891-112280447:-|nuORF;REV__ENST00000488910.1_1_3:112277171-112280432:-|nuORF;REV__ENST00000495756.5_1_3:112255248-112280627:-|nuORF	49.536043120802724	0.308405419312776	4				NaN	NaN	0	NaN	2353	2448	4802
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4804	16.661	NaN	17022	30	0	2845.9	0.106	+			41858	SVTEPSQGR	9	68	480.74072446861715	959.4668960040343	2	480.74053955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVTEPSQGR_	ENSG00000019102|ENST00000326621|VSIG2;nc|ENSG00000019102|Q96IQ7-2|VSIG2	69.6276240434122	0.14239879520340665	4				NaN	NaN	0	NaN	2354	2448	4802
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4805	16.663	NaN	11026	30	0	2811	0.106	+			40240	STSGGCNLK	9	64	433.70523938206003	865.3959258309201	2	433.70526123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STSGGCNLK_	ENSG00000196586|ENST00000369977|MYO6;nc|ENSG00000196586|Q9UM54-2|MYO6;nc|ENSG00000196586|Q9UM54-4|MYO6;nc|ENSG00000196586|Q9UM54-5|MYO6;nc|ENSG00000196586|Q9UM54-6|MYO6;nc|ENSG00000196586|Q9UM54|MYO6	49.44154591367651	0.3095138337212152	4				NaN	NaN	0	NaN	2355	2448	4802
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4806	16.665	NaN	1228.2	30	0	91.046	0.106	+			16253	HEELWKLN	8	54	534.7756694187539	NaN	0	534.7758178710938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HEELWKLN_	ENSG00000186952|ENST00000455884|TMEM232;ENST00000502857.6_1_5:110002437-110003053:-|nuORF;nc|ENSG00000186952|C9JQI7-2|TMEM232;TMEM232|p.N394Ifs*13|3|0.32|ENSG00000186952|chr5:110605204-110605204|T/-|frameshift_variant	42.396135135203025	1.7418937515398478	4				NaN	NaN	0	NaN	2356	2448	4802
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4807	16.667	NaN	1930.4	30	0	429.12	0.106	+			43352	TGCSSWLLA	9	54	469.2273207066385	936.4400884800771	2	469.2270202636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TGCSSWLLA_	RBM15|p.P284Lfs*98|3|0.26|ENSG00000162775|chr1:110340251-110340251|C/-|frameshift_variant	38.80614096846853	0.43426287593479557	4				NaN	NaN	0	NaN	2357	2448	4802
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4808	16.668	NaN	2032.1	30	0	310.43	0.032	+			37400	SLGDVARI	8	50	415.7401123046875	NaN	0	415.7401123046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLGDVARI_	ENSG00000142197|ENST00000691173|DOP1B;nc|ENSG00000142197|Q9Y3R5-2|DOP1B	40.77816245573522	1.7418937515398478	4				NaN	NaN	0	NaN	2358	2448	4802
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4809	16.669	NaN	1135.8	30	0	148.72	0.14				-1	EKSKFEDM	8	41	515.2334513779028	NaN	0	515.2333984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_EKSKFEDM(Oxidation (M))_	ENSG00000164104|ENST00000296503|HMGB2;ENST00000511316.1_1_4:174254218-174255486:-|nuORF	38.80614096846853	1.7418937515398478	4				NaN	NaN	0	NaN	2359	2448	4802
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4828	16.706	NaN	10749	30	0	1252.7	0.214	+			51288	YSAARSAAA	9	70	434.2198236079225	866.425094282645	2	434.2196350097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YSAARSAAA_	ENSG00000189143|ENST00000340958|CLDN4	63.53385203322761	0.18415635464017938	4				NaN	NaN	0	NaN	2375	2451	4827
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4829	16.709	NaN	2590.6	30	0	361.04	0.106	+			6059	AVMKNQVAR	9	64	508.7872314453125	NaN	0	508.7872314453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVMKNQVAR_	ENSG00000020633|ENST00000308873|RUNX3;ENSG00000124813|ENST00000647337|RUNX2;nc|ENSG00000020633|Q13761-2|RUNX3;nc|ENSG00000124813|Q13950-2|RUNX2;nc|ENSG00000124813|Q13950-3|RUNX2;RUNX2|p.G462Efs*22|1|0.36|ENSG00000124813|chr6:45547119-45547119|G/-|frameshift_variant	87.75429964447693	0.046123490950689	4				NaN	NaN	0	NaN	2376	2451	4827
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4830	16.711	NaN	1743.4	30	0	901.98	0.106	+			37055	SIRYEALKK	9	22	369.88916015625	NaN	0	369.88916015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SIRYEALKK_	ENSG00000100364|ENST00000336156|KIAA0930;KIAA0930|p.T293Hfs*26|1|0.3|ENSG00000100364|chr22:45200011-45200012|-/G|frameshift_variant;KIAA0930|p.T293Pfs*27|2|0.16|ENSG00000100364|chr22:45200012-45200012|G/-|frameshift_variant;nc|ENSG00000100364|Q6ICG6-2|KIAA0930;nc|ENSG00000100364|Q6ICG6-3|KIAA0930	24.519189625965996	0.35377483217337163	4				NaN	NaN	0	NaN	2377	2451	4827
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4831	16.713	NaN	2594.3	30	0	464.74	0.106	+			48063	VSSPAGVGVT	10	58	437.23712355270425	872.4596941722085	2	437.2371826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSSPAGVGVT_	ENSG00000134247|ENST00000393203|PTGFRN	56.72105179125745	0.3956618550748046	4				NaN	NaN	0	NaN	2378	2451	4827
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4832	16.715	NaN	3394.1	30	0	1073.1	0.106	+			44658	TTGEPATPK	9	53	451.2346708324131	900.4547887316262	2	451.2350769042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TTGEPATPK_	ENSG00000005302|ENST00000312196|MSL3;MSL3|p.P440Qfs*22|1|0.32|ENSG00000005302|chrX:11772188-11772188|C/-|frameshift_variant;nc|ENSG00000005302|Q8N5Y2-2|MSL3;nc|ENSG00000005302|Q8N5Y2-3|MSL3;nc|ENSG00000005302|Q8N5Y2-4|MSL3;nc|ENSG00000005302|Q8N5Y2-5|MSL3;nc|ENSG00000005302|Q8N5Y2-6|MSL3	62.107414245175825	0.1960472003779324	4				NaN	NaN	0	NaN	2379	2451	4827
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4833	16.717	NaN	7512.3	30	0	2355.7	0.039				-1	VVMAADRSLKK	11	63	411.90365690480814	1232.6891413146245	3	412.23797607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_VVM(Oxidation (M))AADRSLKK_	ENSG00000189241|ENST00000368608|TSPYL1	37.50817390946774	0.5920388381045607	4				NaN	NaN	0	NaN	2380	2451	4827
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4834	16.718	NaN	1245.1	30	0	200.87	0.138	+			29128	NTYKGKSL	8	48	455.75292405287183	909.4912951725437	2	455.75372314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NTYKGKSL_	ENSG00000117523|ENST00000647382|PRRC2C;nc|ENSG00000117523|Q9Y520-3|PRRC2C;nc|ENSG00000117523|Q9Y520-4|PRRC2C;nc|ENSG00000117523|Q9Y520-5|PRRC2C;nc|ENSG00000117523|Q9Y520-6|PRRC2C;nc|ENSG00000117523|Q9Y520|PRRC2C;PRRC2C|p.E156Kfs*66|2|0.25|ENSG00000117523|chr1:171515797-171515797|A/-|frameshift_variant;PRRC2C|p.K1018Nfs*7|1|0.21|ENSG00000117523|chr1:171540521-171540521|A/-|frameshift_variant;PRRC2C|p.K551Nfs*17|1|0.23|ENSG00000117523|chr1:171532743-171532743|A/-|frameshift_variant;PRRC2C|p.P2791Lfs*5|1|0.1|ENSG00000117523|chr1:171591761-171591761|C/-|frameshift_variant	32.81241826257853	0.7059802730411993	4				NaN	NaN	0	NaN	2381	2451	4827
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4852	16.754	NaN	1789.2	30	0	581.65	0.214			+	50142	WISGDEQAK	9	53	517.2504272460938	NaN	0	517.2504272460938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WISGDEQAK_	REV__BTN2A2|p.C169Wfs*16|1|0.3|ENSG00000124508|chr6:26388076-26388086|GCATATCTGGA/-|frameshift_variant;REV__BTN2A2|p.I493Sfs*20|1|0.29|ENSG00000124508|chr6:26392868-26392868|C/-|frameshift_variant;REV__ENSG00000124508|ENST00000356709|BTN2A2;REV__ENST00000467485.5_1_6:26384034-26390495:+|nuORF;REV__nc|ENSG00000124508|Q8WVV5-2|BTN2A2;REV__nc|ENSG00000124508|Q8WVV5-4|BTN2A2	40.77816245573522	0.2702456086868081	4				NaN	NaN	0	NaN	2396	2454	4851
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4853	16.758	NaN	1092	30	0	199.57	0.106			+	31556	QLNEYDPAG	9	45	503.7252197265625	NaN	0	503.7252197265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QLNEYDPAG_	REV__ENSG00000213658|ENST00000395456|LAT;REV__ENST00000562701.5_1_16:28997691-29001330:+|nuORF;REV__ENST00000564447.5_1_16:29000600-29001330:+|nuORF;REV__nc|ENSG00000213658|O43561-3|LAT;REV__nc|ENSG00000213658|O43561-4|LAT;REV__nc|ENSG00000213658|O43561-5|LAT;REV__nc|ENSG00000213658|O43561|LAT	19.996771675451527	0.3693019437812985	4				NaN	NaN	0	NaN	2397	2454	4851
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4854	16.76	NaN	593.35	30	0	63.313	0.035			+	33996	RSGSHPRFA	9	40	507.7646484375	NaN	0	507.7646484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RSGSHPRFA_	REV__ENST00000298125.6_1_13:52336362-52336515:+|nuORF	27.882242232435846	0.3367954786602879	4				NaN	NaN	0	NaN	2398	2454	4851
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4873	16.795	NaN	27101	30	0	9637.1	0.214	+			22574	KTSSAFVGK	9	76	462.7608697166821	923.5071865001643	2	462.7607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTSSAFVGK_	ENSG00000173692|ENST00000308696|PSMD1;nc|ENSG00000173692|Q99460-2|PSMD1;PSMD1-NHEJ1|1|fusion;PSMD1|p.K849Rfs*44|1|0.38|ENSG00000173692|chr2:231165258-231165258|A/-|frameshift_variant;PSMD1|p.L603Afs*7|1|0.19|ENSG00000173692|chr2:231085100-231085101|-/T|frameshift_variant;PSMD1|p.N355Tfs*17|1|0.23|ENSG00000173692|chr2:231077150-231077150|A/-|frameshift_variant	159.27591364854348	0.004707062175358555	4				NaN	NaN	0	NaN	2414	2457	4872
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4874	16.798	NaN	3356.3	30	0	684.62	0.106	+			48270	VTDKGSFEK	9	60	505.7608734645273	1009.5071939958547	2	505.7609558105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTDKGSFEK_	ENSG00000166592|ENST00000299759|RRAD;ENST00000567791.1_1_16:66955609-66957656:-|nuORF	49.536043120802724	0.308405419312776	4				NaN	NaN	0	NaN	2415	2457	4872
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4875	16.8	NaN	1784.3	30	0	517.02	0.106				-1	EGKILVLMA	9	26	330.5291442871094	NaN	0	330.5291442871094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_EGKILVLM(Oxidation (M))A_	ENST00000488537.1_1_1:145439826-145440208:+|nuORF	20.94693142431847	0.3660861156085067	4				NaN	NaN	0	NaN	2416	2457	4872
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4876	16.802	NaN	6243.9	30	0	1753.8	0.106	+			21048	KKKSKDATEK	10	43	388.2314150992841	1161.6724158980523	3	388.2315979003906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KKKSKDATEK_	ENST00000603137.1_1_2:28238673-28239105:-|nuORF	21.68575002086885	0.7027366847906487	4				NaN	NaN	0	NaN	2417	2457	4872
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4877	16.804	NaN	3581.9	30	0	1434.9	0.106			+	34407	RTSSKDKAP	9	56	495.27211660878544	NaN	0	495.2724609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RTSSKDKAP_	REV__ENSG00000130382|ENST00000252674|MLLT1;REV__MLLT1|p.Q461Rfs*46|2|0.33|ENSG00000130382|chr19:6213965-6213965|G/-|frameshift_variant	62.107414245175825	0.1403307765918332	4				NaN	NaN	0	NaN	2418	2457	4872
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4878	16.806	NaN	652.93	30	0	124.06	0.035			+	25605	LQLGGPATPQ	10	26	327.849853515625	NaN	0	327.849853515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LQLGGPATPQ_	REV__TNR|p.L364P|1|0.3|ENSG00000116147|chr1:175396693-175396693|A/G|missense_variant	14.137123925751023	0.4201028297492154	4				NaN	NaN	0	NaN	2419	2457	4872
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4879	16.806	NaN	1913.3	30	0	301.25	0.137	+			38425	SSAKLPQA	8	43	401.2268933029725	800.439233672745	2	401.22686767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSAKLPQA_	ENST00000412797.1_1_1:25916693-25916837:+|nuORF	66.42927471994793	0.4381325844043345	4				NaN	NaN	0	NaN	2420	2457	4872
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4897	16.845	NaN	75623	30	0	39196	0.214	+			14600	GTGASGSFK	9	71	406.20074755102803	810.3869421688561	2	406.20068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTGASGSFK_	ENSG00000124575|ENST00000244534|H1-3;ENSG00000124610|ENST00000244573|H1-1;ENSG00000168298|ENST00000304218|H1-4;ENSG00000184357|ENST00000331442|H1-5;ENSG00000187475|ENST00000338379|H1-6;ENSG00000187837|ENST00000343677|H1-2	136.26810882979174	0.012230845423532208	4				NaN	NaN	0	NaN	2435	2460	4896
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4898	16.849	NaN	7733.4	30	0	1104.3	0.106	+			3611	ASVSSSVAK	9	60	418.22939908427054	834.4442452353411	2	418.22943115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASVSSSVAK_	ENSG00000168564|ENST00000504169|CDKN2AIP	82.7504851949679	0.08565546331141553	4				NaN	NaN	0	NaN	2436	2460	4896
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4899	16.851	NaN	2256.7	30	0	416.56	0.106	+			32382	QVAVNILK	8	53	442.78172862033813	883.5489043074763	2	442.7813720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QVAVNILK_	DNAH11|p.A2559Sfs*4|1|0.42|ENSG00000105877|chr7:21738723-21738724|-/A|frameshift_variant;DNAH11|p.A4348Tfs*8|1|0.06|ENSG00000105877|chr7:21894990-21894991|-/CACTTTA|frameshift_variant;DNAH11|p.C1251Mfs*5|1|0.41|ENSG00000105877|chr7:21606521-21606522|-/A|frameshift_variant;DNAH11|p.C1849Sfs*8|1|0.05|ENSG00000105877|chr7:21683868-21683869|-/CTAAAATTCTCATAAATAG|frameshift_variant;DNAH11|p.E3097Nfs*4|1|0.21|ENSG00000105877|chr7:21773946-21773946|A/-|frameshift_variant;DNAH11|p.K1250Nfs*43|1|0.63|ENSG00000105877|chr7:21606522-21606522|A/-|frameshift_variant;DNAH11|p.K873Nfs*4|1|0.31|ENSG00000105877|chr7:21591523-21591523|A/-|frameshift_variant;DNAH11|p.L3180Sfs*6|1|0.05|ENSG00000105877|chr7:21784481-21784482|-/CAGA|frameshift_variant;DNAH11|p.L441Ifs*25|1|0.26|ENSG00000105877|chr7:21570187-21570188|-/A|frameshift_variant;DNAH11|p.N2201Kfs*6|1|0.04|ENSG00000105877|chr7:21707754-21707755|-/AGTAAAAGATTTC|frameshift_variant;DNAH11|p.N3090Kfs*2|1|0.09|ENSG00000105877|chr7:21773928-21773929|-/A|frameshift_variant;DNAH11|p.N833Tfs*2|1|0.17|ENSG00000105877|chr7:21591404-21591404|A/-|frameshift_variant;DNAH11|p.Q945Kfs*4|1|0.32|ENSG00000105877|chr7:21599946-21599946|T/-|frameshift_variant;DNAH11|p.S2374Qfs*2|1|0.14|ENSG00000105877|chr7:21717910-21717911|-/C|frameshift_variant;DNAH11|p.T4414Nfs*34|1|0.37|ENSG00000105877|chr7:21900050-21900051|-/A|frameshift_variant;DNAH11|p.T4414Qfs*72|3|0.34|ENSG00000105877|chr7:21900051-21900051|A/-|frameshift_variant;DNAH11|p.W2255Mfs*9|1|0.04|ENSG00000105877|chr7:21710627-21710628|-/A|frameshift_variant;ENSG00000105877|ENST00000409508|DNAH11	38.80614096846853	0.6637206697844082	4				NaN	NaN	0	NaN	2437	2460	4896
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4900	16.852	NaN	2996.8	30	0	453.57	0.032	+			35262	SALNGGFQ	8	51	397.19553025006485	792.3765075669297	2	397.1953430175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SALNGGFQ_	ENSG00000182168|ENST00000453304|UNC5C;nc|ENSG00000182168|O95185-2|UNC5C;UNC5C|p.Q860Rfs*14|1|0.28|ENSG00000182168|chr4:95170206-95170206|G/-|frameshift_variant	33.51558372728122	0.7005509609380386	4				NaN	NaN	0	NaN	2438	2460	4896
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4919	16.889	NaN	36492	30	0	3524.3	0.215	+			38155	SQAPKAFNK	9	104	495.7717669151303	989.5289808970606	2	495.77191162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SQAPKAFNK_	ENSG00000099812|ENST00000215582|MISP	98.62937762414208	0.04060045538121712	4				NaN	NaN	0	NaN	2454	2463	4918
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4920	16.893	NaN	5015.9	30	0	1274.1	0.106	+			20590	KGAAIHISK	9	57	462.7848362662927	923.5551195993854	2	462.7848205566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KGAAIHISK_	ENSG00000154305|ENST00000344922|MIA3;ENST00000470521.1_1_1:222791452-222819114:+|nuORF;MIA3|p.D527V|1|0.27|ENSG00000154305|chr1:222628800-222628800|A/T|missense_variant;MIA3|p.E729Nfs*3|1|0.09|ENSG00000154305|chr1:222629403-222629403|A/-|frameshift_variant;MIA3|p.M993Nfs*3|1|0.25|ENSG00000154305|chr1:222630191-222630192|-/A|frameshift_variant;MIA3|p.N746Kfs*10|1|0.35|ENSG00000154305|chr1:222629450-222629451|-/A|frameshift_variant;MIA3|p.P1645Yfs*19|1|0.06|ENSG00000154305|chr1:222659963-222659964|-/TATAG|frameshift_variant;MIA3|p.V974Sfs*4|1|0.36|ENSG00000154305|chr1:222630134-222630135|-/A|frameshift_variant;nc|ENSG00000154305|Q5JRA6-2|MIA3	96.0336014099291	0.047854655524928534	4				NaN	NaN	0	NaN	2455	2463	4918
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4921	16.895	NaN	1545.1	30	0	420.57	0.106	+			38309	SRATPQALL	9	49	478.77940583510923	955.5442587370185	2	478.7797546386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SRATPQALL_	ENSG00000127586|ENST00000262315|CHTF18;nc|ENSG00000127586|Q8WVB6-2|CHTF18;nc|ENSG00000127586|Q8WVB6-3|CHTF18	58.78195531508484	0.22376836668196862	4				NaN	NaN	0	NaN	2456	2463	4918
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4922	16.897	NaN	4494.1	30	0	514.2	0.106	+			28112	NAHESKQMY	9	62	554.2483925983821	1106.4822322635641	2	554.2489013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NAHESKQMY_	ENSG00000108639|ENST00000225777|SYNGR2;ENST00000591770.1_1_17:76164697-76167257:+|nuORF;nc|ENSG00000108639|O43760-2|SYNGR2	117.81106730687013	0.02252488733980868	4				NaN	NaN	0	NaN	2457	2463	4918
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4923	16.898	NaN	562.97	30	0	77.51	0.106				-1	ERMRSVRL	8	43	531.7932739257812	NaN	0	531.7932739257812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_ERM(Oxidation (M))RSVRL_	ENSG00000131697|ENST00000378156|NPHP4;ENST00000470763.1_1_1:5936963-5940792:-|nuORF	27.882242232435846	1.7418937515398478	4				NaN	NaN	0	NaN	2458	2463	4918
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4924	16.9	NaN	700.39	30	0	138.58	0.034	+			5306	ATVKTGLQK	9	39	473.29022216796875	NaN	0	473.29022216796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATVKTGLQK_	ENSG00000147548|ENST00000317025|NSD3;ENST00000525081.1_1_8:38175476-38176470:-|nuORF;nc|ENSG00000147548|Q9BZ95-2|NSD3;nc|ENSG00000147548|Q9BZ95-3|NSD3;nc|ENSG00000147548|Q9BZ95-4|NSD3;nc|ENSG00000147548|Q9BZ95-5|NSD3	25.57405402267927	0.3484490411150625	4				NaN	NaN	0	NaN	2459	2463	4918
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4925	16.901	NaN	1270.6	30	0	210.94	0.14	+			977	AEKDGARVM	9	58	488.7474670410156	NaN	0	488.7474670410156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AEKDGARVM_	ENSG00000138119|ENST00000359263|MYOF;nc|ENSG00000138119|Q9NZM1-2|MYOF;nc|ENSG00000138119|Q9NZM1-3|MYOF;nc|ENSG00000138119|Q9NZM1-5|MYOF;nc|ENSG00000138119|Q9NZM1-6|MYOF	56.43379154798735	0.16452882468284893	4				NaN	NaN	0	NaN	2460	2463	4918
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4943	16.94	NaN	5874.5	30	0	1659.4	0.214	+			15028	GTNHQLTVK	9	63	499.2749168006855	996.535280668171	2	499.27490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTNHQLTVK_	ENSG00000142197|ENST00000691173|DOP1B;nc|ENSG00000142197|Q9Y3R5-2|DOP1B	128.60217544463768	0.015992218256422188	4				NaN	NaN	0	NaN	2475	2466	4942
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4944	16.944	NaN	1182.5	30	0	380.75	0.106	+			27291	MGPAPAHLV	9	44	446.7403051120402	891.4660572908804	2	446.74017333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MGPAPAHLV_	ENST00000324685.10_1_16:30785454-30785649:+|nuORF	29.841539824830324	0.5243625958137083	4				NaN	NaN	0	NaN	2476	2466	4942
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4945	16.946	NaN	2958.2	30	0	731.97	0.106	+			23071	KVTTSITSK	9	51	482.7870704005334	963.5595878678669	2	482.78692626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KVTTSITSK_	ENSG00000082074|ENST00000512982|FYB1;nc|ENSG00000082074|O15117-3|FYB1;nc|ENSG00000082074|O15117|FYB1	57.148748479083515	0.2373828479495039	4				NaN	NaN	0	NaN	2477	2466	4942
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4946	16.947	NaN	2544.6	30	0	746.38	0.106	+			25050	LLKGDAHS	8	45	420.7321713701166	839.4497898070332	2	420.7323303222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LLKGDAHS_	ENSG00000134215|ENST00000370056|VAV3;ENST00000343258.8_1_1:108115955-108328118:-|nuORF;ENST00000479977.6_1_1:108152551-108231104:-|nuORF;ENST00000525231.5_1_1:108152106-108185366:-|nuORF;ENST00000525460.5_1_1:108115955-108220600:-|nuORF;nc|ENSG00000134215|Q9UKW4-2|VAV3;nc|ENSG00000134215|Q9UKW4-3|VAV3;nc|ENSG00000134215|Q9UKW4-4|VAV3	44.116797842482775	0.6307669463330267	4				NaN	NaN	0	NaN	2478	2466	4942
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4947	16.949	NaN	3968.6	30	0	761.5	0.106			+	-1	SLKHLCESL	9	52	362.8585790293351	NaN	0	362.85845947265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_SLKHLC(Carbamidomethyl (C))ESL_	REV__ENST00000380009.8_1_5:94890945-94903636:+|nuORF	32.81241826257853	0.3119040447479903	4				NaN	NaN	0	NaN	2479	2466	4942
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4948	16.951	NaN	968.55	30	0	133.4	0.037	+			22272	KTATQPLLKK	10	39	376.57611083984375	NaN	0	376.57611083984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KTATQPLLKK_	ENSG00000064651|ENST00000262461|SLC12A2;SLC12A2|p.E1119Rfs*7|1|0.47|ENSG00000064651|chr5:128184417-128184418|-/A|frameshift_variant;SLC12A2|p.P1171Sfs*18|1|0.38|ENSG00000064651|chr5:128186498-128186499|-/TC|frameshift_variant	31.634271133179894	0.39630454568332174	4				NaN	NaN	0	NaN	2480	2466	4942
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4949	16.952	NaN	42696	30	0	4420.6	0.146	+			27239	MENAEQRKMEA	11	84	465.5394235587467	1393.5964412764401	3	465.5400085449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))M(Oxidation (M))ENAEQRKMEA_	ENST00000371160.5_1_X:123095175-123095259:+|nuORF	44.639436926238396	0.4944613868569842	4				NaN	NaN	0	NaN	2481	2466	4942
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4967	16.989	NaN	8072.6	30	0	989.44	0.215			+	32033	QRQEIVAK	8	71	486.2851747138607	970.5557964945215	2	486.2851257324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QRQEIVAK_	REV__ENSG00000145916|ENST00000313386|RMND5B;REV__ENSG00000153561|ENST00000283632|RMND5A;REV__ENST00000507937.1_1_5:177574516-177575030:+|nuORF;REV__ENST00000515360.5_1_5:177569546-177575030:+|nuORF;REV__nc|ENSG00000145916|Q96G75-2|RMND5B	79.71258880314673	0.32596852995588826	4				NaN	NaN	0	NaN	2496	2469	4966
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4968	16.993	NaN	13824	30	0	2194.6	0.106	+			5419	ATYHGSFSTKK	11	77	409.5436677683606	1225.6091739052818	3	409.5436706542969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATYHGSFSTKK_	ENSG00000163359|ENST00000295550|COL6A3;ENST00000491769.1_1_2:238233419-238250825:-|nuORF;ENST00000493608.1_1_2:238242084-238243404:-|nuORF;nc|ENSG00000163359|P12111-2|COL6A3;nc|ENSG00000163359|P12111-4|COL6A3	53.08895987439943	0.38514566451266113	4				NaN	NaN	0	NaN	2497	2469	4966
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4969	16.995	NaN	15656	30	0	4934	0.106	+			22366	KTIDASVSK	9	66	474.7713800079506	947.5282070827012	2	474.7710876464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KTIDASVSK_	ENSG00000171681|ENST00000261168|ATF7IP;ENST00000535179.1_1_12:14619386-14628955:+|nuORF;ENST00000537653.5_1_12:14576849-14628955:+|nuORF;nc|ENSG00000171681|Q6VMQ6-2|ATF7IP;nc|ENSG00000171681|Q6VMQ6-4|ATF7IP;nc|ENSG00000171681|Q6VMQ6-5|ATF7IP	139.38205640894643	0.01076996779551382	4				NaN	NaN	0	NaN	2498	2469	4966
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4970	16.997	NaN	3305.7	30	0	1208.5	0.106				-1	STCDKSFCR	9	39	387.4989318847656	NaN	0	387.4989318847656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_STC(Carbamidomethyl (C))DKSFC(Carbamidomethyl (C))R_	ENSG00000181472|ENST00000325144|ZBTB2;ZBTB2|p.F476Lfs*3|1|0.24|ENSG00000181472|chr6:151365638-151365638|A/-|frameshift_variant	31.529811441608018	0.3183796599642538	4				NaN	NaN	0	NaN	2499	2469	4966
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4971	16.999	NaN	2127.5	30	0	1262.2	0.106				-1	ASPKLKSSC	9	20	326.5075378417969	NaN	0	326.5075378417969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_ASPKLKSSC(Carbamidomethyl (C))_	ENSG00000109819|ENST00000264867|PPARGC1A;ENST00000509702.5_1_4:23766811-23826805:-|nuORF;nc|ENSG00000109819|Q9UBK2-3|PPARGC1A;nc|ENSG00000109819|Q9UBK2-4|PPARGC1A;nc|ENSG00000109819|Q9UBK2-9|PPARGC1A	14.864876125193954	0.3866709117995958	4				NaN	NaN	0	NaN	2500	2469	4966
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4972	17	NaN	1065.4	30	0	336.91	0.035	+			38873	SSNSYAIKK	9	30	333.1819672225911	996.5240722679732	3	333.1818542480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSNSYAIKK_	ENSG00000083845|ENST00000196551|RPS5;ENST00000599232.1_1_19:58906030-58906114:+|nuORF	33.921630207806714	0.48623198279849766	4				NaN	NaN	0	NaN	2501	2469	4966
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4973	17.001	NaN	845.44	30	0	89.306	0.139	+			30380	PVPGLGGSSNG	11	43	471.23797607421875	NaN	0	471.23797607421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PVPGLGGSSNG_	ENST00000419900.5_1_10:96305629-96306155:+|nuORF	35.61828744233558	0.4066803947888518	4				NaN	NaN	0	NaN	2502	2469	4966
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4991	17.04	NaN	30778	30	0	18056	0.214	+			22380	KTIDRLAGK	9	60	334.541403749668	1000.602381849204	3	334.54150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTIDRLAGK_	nc|ENSG00000211895|P01876-1|IGHA1	82.7504851949679	0.08565546331141553	4				NaN	NaN	0	NaN	2517	2472	4990
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4992	17.044	NaN	4263.4	30	0	1104	0.106	+			39414	STDQASAIK	9	56	460.73749602359237	919.4604391139848	2	460.7372131347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STDQASAIK_	ENSG00000127481|ENST00000375254|UBR4;nc|ENSG00000127481|Q5T4S7-2|UBR4;nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000127481|Q5T4S7-4|UBR4;nc|ENSG00000127481|Q5T4S7-5|UBR4;UBR4|p.C4515Wfs*2|1|0.06|ENSG00000127481|chr1:19095626-19095626|G/-|frameshift_variant;UBR4|p.L4771Cfs*7|1|0.25|ENSG00000127481|chr1:19088878-19088878|G/-|frameshift_variant;UBR4|p.P4047Ifs*4|1|0.4|ENSG00000127481|chr1:19106932-19106933|GG/-|frameshift_variant	106.88024417677582	0.032181361622142884	4				NaN	NaN	0	NaN	2518	2472	4990
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4993	17.046	NaN	2463.6	30	0	849.76	0.106	+			42563	TASFAERR	8	53	469.2452113101844	NaN	0	469.24517822265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TASFAERR_	ENST00000605506.1_1_1:84543221-84543581:-|nuORF	45.9519527083369	1.7418937515398478	4				NaN	NaN	0	NaN	2519	2472	4990
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4994	17.048	NaN	1907.3	30	0	206.73	0.106			+	-1	LVVPCPLR	8	65	477.2851257324219	NaN	0	477.2851257324219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_LVVPC(Carbamidomethyl (C))PLR_	REV__ENST00000436966.1_1_1:226059699-226065338:-|nuORF	37.028477286268924	1.7418937515398478	4				NaN	NaN	0	NaN	2520	2472	4990
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4995	17.049	NaN	726.41	30	0	122.83	0.106	+			29615	PGAALVAS	8	32	343.1974169274755	NaN	0	343.1973571777344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PGAALVAS_	ENST00000330883.8_1_7:150652652-150652847:-|nuORF	54.76467175910256	1.7418937515398478	4				NaN	NaN	0	NaN	2521	2472	4990
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4996	17.051	NaN	750.68	30	0	131.41	0.037			+	-1	AACEPGKLTR	10	33	368.1952819824219	NaN	0	368.1952819824219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_AAC(Carbamidomethyl (C))EPGKLTR_	REV__ENSG00000108557|ENST00000353383|RAI1;REV__nc|ENSG00000258436|Q7Z5J4-2|RAI1	36.446750945000026	0.3805027428805705	4				NaN	NaN	0	NaN	2522	2472	4990
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4997	17.052	NaN	1713.5	30	0	248.6	0.139	+			25805	LSCAKMLQS	9	52	490.74908447265625	NaN	0	490.74908447265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSCAKMLQS_	ENST00000554528.1_1_14:104381385-104387854:-|nuORF;ENST00000557260.1_1_14:104380761-104387854:-|nuORF	37.81151784470057	0.28666463014928195	4				NaN	NaN	0	NaN	2523	2472	4990
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5015	17.091	NaN	70670	30	0	14358	0.214	+			38256	SQNPRFYHK	9	81	392.8682952314057	1175.583056294417	3	392.8683776855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SQNPRFYHK_	ENSG00000132522|ENST00000380728|GPS2;ENST00000571697.5_1_17:7216077-7216449:-|nuORF;ENST00000573807.5_1_17:7216077-7216773:-|nuORF;ENST00000574458.1_1_17:7216077-7216212:-|nuORF	95.81516180277367	0.04847050768394289	4				NaN	NaN	0	NaN	2538	2475	5014
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5016	17.095	NaN	5492.6	30	0	1037.9	0.106	+			14368	GTAEPGGSMK	10	56	467.7180573999127	933.4215618666254	2	467.7181701660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTAEPGGSMK_	ENSG00000183963|ENST00000333137|SMTN;ENST00000460658.5_1_22:31484094-31491444:+|nuORF;ENST00000489337.5_1_22:31484532-31494796:+|nuORF;nc|ENSG00000183963|P53814-6|SMTN;nc|ENSG00000183963|P53814|SMTN;SMTN|p.S536Vfs*33|1|0.33|ENSG00000183963|chr22:31091813-31091813|C/-|frameshift_variant	80.45461616416974	0.1919067876629769	4				NaN	NaN	0	NaN	2539	2475	5014
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5017	17.097	NaN	6590.9	30	0	1968.1	0.106	+			13635	GMLKNLKEPP	10	46	376.2142837045072	1125.6210217137216	3	376.21435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GMLKNLKEPP_	ENSG00000053108|ENST00000265342|FSTL4;ENST00000509525.5_1_5:132534789-132560973:-|nuORF;FSTL4|p.G790Vfs*6|1|0.38|ENSG00000053108|chr5:133199255-133199255|C/-|frameshift_variant;nc|ENSG00000053108|Q6MZW2-2|FSTL4	21.9598887501803	0.7004979571547932	4				NaN	NaN	0	NaN	2540	2475	5014
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5018	17.098	NaN	21475	30	0	12232	0.106	+			49158	VVMGKQQSKLK	11	51	415.9163945956835	1244.7273543872507	3	415.91650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVMGKQQSKLK_	ENSG00000148225|ENST00000374193|WDR31;nc|ENSG00000148225|Q8NA23-2|WDR31	45.908116695636124	0.4771019740774998	4				NaN	NaN	0	NaN	2541	2475	5014
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5019	17.1	NaN	3757.1	30	0	659.41	0.106				-1	TLSFPVMKK	9	42	356.2050347689257	NaN	0	356.205078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_TLSFPVM(Oxidation (M))KK_	ENST00000393104.6_1_10:112641005-112641053:+|nuORF	37.81151784470057	0.28666463014928195	4				NaN	NaN	0	NaN	2542	2475	5014
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5020	17.102	NaN	2957.4	30	0	822.36	0.041			+	-1	SLFQVRSKMEE	11	56	457.2317810058594	NaN	0	457.2317810058594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_SLFQVRSKM(Oxidation (M))EE_	REV__ENSG00000171798|ENST00000304613|KNDC1	29.550750289552195	0.43372083775723597	4				NaN	NaN	0	NaN	2543	2475	5014
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5021	17.103	NaN	1612.7	30	0	110.35	0.137	+			43333	TGASVLNK	8	48	395.22662353515625	NaN	0	395.22662353515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TGASVLNK_	DDX1|p.R400Dfs*4|1|0.32|ENSG00000079785|chr2:15618258-15618258|A/-|frameshift_variant;ENSG00000079785|ENST00000233084|DDX1;nc|ENSG00000079785|Q92499-2|DDX1	35.61828744233558	1.7418937515398478	4				NaN	NaN	0	NaN	2544	2475	5014
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5039	17.142	NaN	19912	30	0	8492.2	0.214	+			6355	AVTSGVATK	9	58	417.23985858707766	NaN	0	417.2398681640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVTSGVATK_	ENSG00000249992|ENST00000503771|TMEM158;nc|ENSG00000249992|Q8WZ71-2|TMEM158	93.1432384553994	0.0352600271724948	4				NaN	NaN	0	NaN	2559	2478	5038
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5040	17.146	NaN	13993	30	0	5800.7	0.106	+			22517	KTQEIFHSK	9	79	373.2046607211203	1116.592152763561	3	373.204833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTQEIFHSK_	ENSG00000108557|ENST00000353383|RAI1;nc|ENSG00000258436|Q7Z5J4-2|RAI1;nc|ENSG00000258436|Q7Z5J4-3|RAI1	101.25262130126117	0.03792372629710479	4				NaN	NaN	0	NaN	2560	2478	5038
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5041	17.148	NaN	2782.6	30	0	1350.1	0.106	+			17104	HSGTIITQK	9	53	492.7761189069731	NaN	0	492.7768249511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HSGTIITQK_	ENSG00000083857|ENST00000441802|FAT1;FAT1|p.G2934Vfs*3|2|0.37|ENSG00000083857|chr4:186617787-186617787|T/-|frameshift_variant;FAT1|p.N3847Yfs*7|1|0.03|ENSG00000083857|chr4:186601370-186601371|-/TTATA|frameshift_variant;FAT1|p.P3228Lfs*42|1|0.27|ENSG00000083857|chr4:186611556-186611556|G/-|frameshift_variant;FAT1|p.P4313Lfs*36|1|0.34|ENSG00000083857|chr4:186596602-186596602|G/-|frameshift_variant;FAT1|p.Q2933Hfs*14|1|0.33|ENSG00000083857|chr4:186617787-186617788|-/G|frameshift_variant;FAT1|p.V1878Cfs*8|2|0.22|ENSG00000083857|chr4:186620955-186620956|-/G|frameshift_variant	87.69643885390035	0.04624013146650493	4				NaN	NaN	0	NaN	2561	2478	5038
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5042	17.149	NaN	1741.3	30	0	311.2	0.106			+	29553	PEQRAKAY	8	49	481.75579167382614	NaN	0	481.7558898925781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PEQRAKAY_	REV__ENSG00000187144|ENST00000335496|SPATA21;REV__nc|ENSG00000187144|Q7Z572-2|SPATA21	35.61828744233558	1.7418937515398478	4				NaN	NaN	0	NaN	2562	2478	5038
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5043	17.151	NaN	1037.9	30	0	215.41	0.106	+			9077	EGGTRFGAR	9	44	475.74251626435927	NaN	0	475.7425231933594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EGGTRFGAR_	ENSG00000235194|ENST00000452015|PPP1R3E	30.317721548370564	0.32449924987115025	4				NaN	NaN	0	NaN	2563	2478	5038
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5044	17.153	NaN	1528.9	30	0	191.9	0.035			+	4522	ATKNDNNQE	9	49	517.2303904754508	1032.4462280177015	2	517.2188720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATKNDNNQE_	REV__ANKS1A|p.E150K|1|0.19|ENSG00000064999|chr6:34981702-34981702|G/A|missense_variant	29.170058357718403	0.5306379469863586	4				NaN	NaN	0	NaN	2564	2478	5038
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5045	17.154	NaN	3179.8	30	0	425.7	0.139			+	30270	PTEGPHVQ	8	59	432.71502065893236	NaN	0	432.7143249511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PTEGPHVQ_	REV__AGBL4|p.R228Q|1|0.36|ENSG00000186094|chr1:48663193-48663193|C/T|missense_variant	55.50420428727701	1.7418937515398478	4				NaN	NaN	0	NaN	2565	2478	5038
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5063	17.193	NaN	3541.5	30	0	840.84	0.214			+	38600	SSGLLHLS	8	56	407.2268490824776	812.4391452317552	2	407.2268981933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSGLLHLS_	REV__chr20:31744675-31757407|118|20.62|0.09|7.81|+|2|TE_info:AluJb,AluJb_dup120112,Alu,SINE,donor,-,31744514,31744675|None,TPX2|2	33.51558372728122	0.7005509609380386	4				NaN	NaN	0	NaN	2580	2481	5062
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5064	17.196	NaN	2944.8	30	0	529.84	0.106			+	8625	EDAREEER	8	51	517.2303904754508	1032.4462280177015	2	517.23095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EDAREEER_	REV__ENST00000489337.5_1_22:31484532-31494796:+|nuORF;REV__ENST00000493335.5_1_22:31492537-31494796:+|nuORF	66.42927471994793	0.4381325844043345	4				NaN	NaN	0	NaN	2581	2481	5062
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5065	17.199	NaN	5096.7	30	0	900.39	0.106	+			22775	KVFDAKPSAK	10	62	545.8163788285938	1089.6182047239874	2	545.8167114257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KVFDAKPSAK_	ENSG00000143889|ENST00000449105|HNRNPLL;nc|ENSG00000143889|Q8WVV9-4|HNRNPLL;nc|ENSG00000143889|Q8WVV9-5|HNRNPLL	133.9117890846969	0.012377333629693975	4				NaN	NaN	0	NaN	2582	2481	5062
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5066	17.2	NaN	1707.4	30	0	384.21	0.106	+			30398	PVRRESAGA	9	56	471.7591834217314	941.5038139102628	2	471.75933837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PVRRESAGA_	ENSG00000213619|ENST00000263774|NDUFS3;ENST00000531351.1_1_11:47600840-47602405:+|nuORF;ENST00000533105.1_1_11:47600795-47602306:+|nuORF;nc|ENSG00000213619|O75489-2|NDUFS3	23.04248740728303	0.5879033540491928	4				NaN	NaN	0	NaN	2583	2481	5062
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5067	17.202	NaN	1042.3	30	0	166.53	0.106			+	32373	QVAGKGVLI	9	44	442.78172862033813	883.5489043074763	2	442.78118896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QVAGKGVLI_	REV__AOC2|p.N533Tfs*4|1|0.08|ENSG00000131480|chr17:42849091-42849091|A/-|frameshift_variant;REV__ENSG00000131480|ENST00000253799|AOC2;REV__nc|ENSG00000131480|O75106-2|AOC2	55.50420428727701	0.2510918378945873	4				NaN	NaN	0	NaN	2584	2481	5062
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5068	17.204	NaN	2920.5	30	0	840.42	0.039				-1	DVLEALCKER	10	43	411.548115544174	1231.622517232722	3	411.5481872558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_DVLEALC(Carbamidomethyl (C))KER_	ENSG00000103253|ENST00000389703|HAGHL;ENST00000549114.5_1_16:779204-779453:+|nuORF	31.634271133179894	0.6214930414500597	4				NaN	NaN	0	NaN	2585	2481	5062
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5069	17.205	NaN	442.42	30	0	62.171	0.142				-1	TVMWDGWLE	9	30	576.7554931640625	NaN	0	576.7554931640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_TVM(Oxidation (M))WDGWLE_	ENST00000342295.5_2_4:26435981-26436182:+|nuORF	24.20275056022122	0.35506675290109213	4				NaN	NaN	0	NaN	2586	2481	5062
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5087	17.244	NaN	103160	30	0	46570	0.214	+			35156	SAIDKMTKK	9	84	341.1948908571627	1020.5628431716882	3	341.19512939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAIDKMTKK_	CTNNA1|p.K493Nfs*31|1|0.19|ENSG00000044115|chr5:138917827-138917827|A/-|frameshift_variant;CTNNA1|p.T832*|1|0.29|ENSG00000044115|chr5:138933859-138933862|CAGA/-|frameshift_variant;ENSG00000044115|ENST00000302763|CTNNA1;ENST00000515849.2_1_5:114726864-114727050:-|nuORF;ENST00000517534.5_1_5:138163374-138223382:+|nuORF;nc|ENSG00000044115|P35221-2|CTNNA1	68.84614121027924	0.14577793175421136	4				NaN	NaN	0	NaN	2601	2484	5086
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5088	17.247	NaN	2996.7	30	0	727.16	0.106				-1	SLSMVTANK	9	50	483.74949752734443	965.4844421214889	2	483.74951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_SLSM(Oxidation (M))VTANK_	ENSG00000167861|ENST00000425042|HID1;HID1|p.P773Lfs*8|1|0.17|ENSG00000167861|chr17:74951619-74951619|G/-|frameshift_variant;nc|ENSG00000167861|Q8IV36-2|HID1;nc|ENSG00000167861|Q8IV36-3|HID1	44.116797842482775	0.37197099687881774	4				NaN	NaN	0	NaN	2602	2484	5086
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5089	17.25	NaN	5617.4	30	0	881.24	0.106	+			46271	VEHETQKL	8	64	492.2615029021618	982.5084528711236	2	492.2612609863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VEHETQKL_	ENSG00000065613|ENST00000369755|SLK;ENSG00000072786|ENST00000176763|STK10;ENST00000517360.1_1_5:171471888-171480055:-|nuORF;nc|ENSG00000065613|Q9H2G2-2|SLK	99.37495909608758	0.2510236104623939	4				NaN	NaN	0	NaN	2603	2484	5086
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5090	17.251	NaN	4334	30	0	2373.8	0.106			+	19469	KASMVSVATK	10	56	511.2888278117466	1020.5631026902932	2	511.28900146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KASMVSVATK_	REV__ENST00000235382.6_1_1:192781278-192781335:+|nuORF	53.08895987439943	0.42869529153390606	4				NaN	NaN	0	NaN	2604	2484	5086
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5091	17.253	NaN	7300.8	30	0	3811.7	0.106	+			45781	VAGEVRALRK	10	35	366.8960918777683	1097.666446233505	3	366.8962097167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VAGEVRALRK_	ANGPTL6|p.G354Afs*115|1|0.27|ENSG00000130812|chr19:10093510-10093510|C/-|frameshift_variant;ENSG00000130812|ENST00000253109|ANGPTL6	23.04248740728303	0.69165701907106	4				NaN	NaN	0	NaN	2605	2484	5086
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5092	17.255	NaN	636.49	30	0	66.592	0.035			+	578	ADKFGSRRG	9	39	497.26409201212056	NaN	0	497.26385498046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ADKFGSRRG_	REV__ENST00000355295.4_1_9:100174408-100190800:+|nuORF	30.317721548370564	0.32449924987115025	4				NaN	NaN	0	NaN	2606	2484	5086
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5093	17.256	NaN	1164.3	30	0	333.35	0.144			+	45829	VAKEKPQAK	9	32	333.5377956866125	997.5915576600376	3	334.2219543457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VAKEKPQAK_	REV__ENST00000579224.5_1_17:18001659-18002970:+|nuORF	12.206847966760668	0.6112419832031292	4				NaN	NaN	0	NaN	2607	2484	5086
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5111	17.295	NaN	228970	30	0	143790	0.214	+			17191	HTSTVLTTK	9	106	494.27739580797135	986.5402386827427	2	494.27691650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HTSTVLTTK_	ENSG00000117983|ENST00000529681|MUC5B;ENSG00000117983|ENST00000529681|MUC5B;MUC5B|p.P3417Qfs*3|1|0.41|ENSG00000117983|chr11:1247125-1247125|C/-|frameshift_variant;MUC5B|p.S3126Pfs*13|1|0.37|ENSG00000117983|chr11:1246251-1246251|C/-|frameshift_variant;MUC5B|p.S3878Pfs*27|1|0.13|ENSG00000117983|chr11:1248507-1248507|C/-|frameshift_variant;MUC5B|p.S4017Lfs*56|1|0.22|ENSG00000117983|chr11:1248928-1248929|-/C|frameshift_variant;MUC5B|p.T4706Pfs*4|2|0.37|ENSG00000117983|chr11:1250996-1250996|A/-|frameshift_variant;MUC5B|p.T4706Pfs*4|2|0.37|ENSG00000117983|chr11:1250996-1250996|A/-|frameshift_variant	146.78539889680295	0.007618400906539062	4				NaN	NaN	0	NaN	2622	2487	5110
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5112	17.298	NaN	7011.9	30	0	1862.6	0.106				-1	 	0	58	453.1972813125295	904.3800096918591	2	453.19720458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2623	2487	5110
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5113	17.301	NaN	3942.8	30	0	664.29	0.106	+			24098	LEKKKDYKL	9	54	388.9043264734266	NaN	0	388.9043884277344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LEKKKDYKL_	ENSG00000183520|ENST00000373014|UTP11;ENST00000486563.1_1_1:38478474-38482093:+|nuORF;nc|ENSG00000183520|Q9Y3A2-2|UTP11	77.31757898189308	0.08057531075035683	4				NaN	NaN	0	NaN	2624	2487	5110
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5114	17.302	NaN	6321.2	30	0	3382.6	0.106	+			51384	YTLRNKEVK	9	43	384.2238649126	1149.649765338	3	384.22393798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YTLRNKEVK_	ENSG00000124657|ENST00000244623|OR2B6;ENSG00000168131|ENST00000303324|OR2B2;ENSG00000169488|ENST00000305051|OR4K15;ENSG00000176299|ENST00000641200|OR4M1;ENSG00000182634|ENST00000641585|OR10G7;ENSG00000182974|ENST00000332663|OR4M2B;ENSG00000196184|ENST00000423932|OR10J1;ENSG00000196248|ENST00000641123|OR10S1;ENSG00000197309|ENST00000641351|OR10D3;ENSG00000234560|ENST00000641224|OR10G8;ENSG00000236981|ENST00000375024|OR10G9;ENSG00000254737|ENST00000641722|OR10G4;ENSG00000256574|ENST00000553795|OR13A1;ENSG00000274102|ENST00000614722|OR4M2;ENSG00000280236|ENST00000642051|OR12D2;nc|ENSG00000196184|P30954|OR10J1;nc|ENSG00000196248|Q8NGN2|OR10S1;nc|ENSG00000196383|P0C623|OR4Q2;nc|ENSG00000251608|P0DN82|OR12D1	36.446750945000026	0.4619375763483977	4				NaN	NaN	0	NaN	2625	2487	5110
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5115	17.304	NaN	20086	30	0	2396.1	0.106				-1	ATQFMPDPKLM	11	79	437.5411038652906	1309.6014821960719	3	437.5406188964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Oxidation (M)	_ATQFM(Oxidation (M))PDPKLM(Oxidation (M))_	ENSG00000155008|ENST00000373173|APOOL	60.1669710687717	0.32196467475348695	4				NaN	NaN	0	NaN	2626	2487	5110
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5116	17.306	NaN	16472	30	0	5398.5	0.106	+			385	AASEAGRAM	9	87	432.20565424194984	862.3967555506997	2	432.25439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AASEAGRAM_	ENSG00000071859|ENST00000393600|FAM50A	77.31757898189308	0.1091473830098891	4				NaN	NaN	0	NaN	2627	2487	5110
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5117	17.308	NaN	252.91	30	0	77.631	0.03	+			49311	VVQVREKK	8	18	329.2112731933594	NaN	0	329.2112731933594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VVQVREKK_	ENSG00000203685|ENST00000366788|STUM	11.511019455917149	1.7418937515398478	4				NaN	NaN	0	NaN	2628	2487	5110
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5135	17.344	NaN	21605	30	0	6784.1	0.214	+			386	AASEAGRAM	9	87	432.20565424194984	862.3967555506997	2	432.2056579589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AASEAGRAM_	ENSG00000071859|ENST00000393600|FAM50A	67.49366992349736	0.1516260258713357	4				NaN	NaN	0	NaN	2643	2490	5134
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5136	17.348	NaN	15589	30	0	3088.1	0.106	+			15087	GTQGSPITK	9	60	444.74279438088035	887.4710358285607	2	444.74285888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTQGSPITK_	ENSG00000110237|ENST00000263674|ARHGEF17;ENST00000536481.1_1_11:73075528-73075729:+|nuORF	168.25843898104137	0.0030641937004078144	4				NaN	NaN	0	NaN	2644	2490	5134
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5137	17.35	NaN	18701	30	0	2466.8	0.106	+			34297	RTLNKVAMK	9	84	354.21454786222955	1059.6218141868887	3	353.888916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RTLNKVAMK_	COPG1|p.V308I|1|0.46|ENSG00000181789|chr3:129260383-129260383|G/A|missense_variant;ENSG00000158623|ENST00000425248|COPG2;ENSG00000181789|ENST00000314797|COPG1;nc|ENSG00000158623|Q9UBF2-2|COPG2	82.7504851949679	0.08565546331141553	4				NaN	NaN	0	NaN	2645	2490	5134
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5138	17.352	NaN	13805	30	0	3886.2	0.106	+			34299	RTLNKVAMK	9	75	530.818099444806	1059.6216459564118	2	530.8190307617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RTLNKVAMK_	COPG1|p.V308I|1|0.46|ENSG00000181789|chr3:129260383-129260383|G/A|missense_variant;ENSG00000158623|ENST00000425248|COPG2;ENSG00000181789|ENST00000314797|COPG1;nc|ENSG00000158623|Q9UBF2-2|COPG2	106.68306549817024	0.032382560583716295	4				NaN	NaN	0	NaN	2646	2490	5134
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5139	17.354	NaN	10382	30	0	3048.5	0.106			+	17111	HSIIQGDR	8	75	463.2461027772699	924.4776526213399	2	463.2461242675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HSIIQGDR_	REV__DCDC1|p.N526Mfs*10|1|0.2|ENSG00000170959|chr11:30905013-30905013|T/-|frameshift_variant;REV__ENSG00000170959|ENST00000684477|DCDC1;REV__nc|ENSG00000170959|M0R2J8|DCDC1	56.72105179125745	0.5342425954139568	4				NaN	NaN	0	NaN	2647	2490	5134
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5140	17.355	NaN	3062.6	30	0	1258.2	0.035	+			6185	AVQNLPTKK	9	33	333.5377956866125	997.5915576600376	3	333.5378723144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AVQNLPTKK_	ENSG00000146376|ENST00000368149|ARHGAP18;nc|ENSG00000146376|Q8N392-2|ARHGAP18	30.503639358989545	0.5181749237905803	4				NaN	NaN	0	NaN	2648	2490	5134
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5141	17.356	NaN	682.65	30	0	98.63	0.139	+			30063	PQGKTLRNG	9	38	485.7762451171875	NaN	0	485.7762451171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PQGKTLRNG_	ENST00000525995.1_1_11:10827460-10829842:-|nuORF;ENST00000526148.5_2_11:10827460-10828835:-|nuORF;ENST00000530702.1_2_11:10827460-10828835:-|nuORF	21.68575002086885	0.36358557434667943	4				NaN	NaN	0	NaN	2649	2490	5134
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5152	17.382	NaN	6173.5	30	0	963.43	0.214	+			34298	RTLNKVAMK	9	59	354.21454786222955	1059.6218141868887	3	354.2146301269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTLNKVAMK_	COPG1|p.V308I|1|0.46|ENSG00000181789|chr3:129260383-129260383|G/A|missense_variant;ENSG00000158623|ENST00000425248|COPG2;ENSG00000181789|ENST00000314797|COPG1;nc|ENSG00000158623|Q9UBF2-2|COPG2	72.87924865735499	0.12833875048249987	4				NaN	NaN	0	NaN	2657	2493	5151
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5153	17.386	NaN	5525.9	30	0	1216.4	0.106	+			16171	HEAKIKSL	8	67	463.27681602901123	924.5390791248225	2	463.2765808105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HEAKIKSL_	ENSG00000168280|ENST00000435030|KIF5C;ENSG00000170759|ENST00000302418|KIF5B;ENST00000460377.1_2:149835462-149853923:+|nuORF;KIF5C|p.S816Vfs*68|1|0.35|ENSG00000168280|chr2:149005459-149005459|A/-|frameshift_variant;nc|ENSG00000168280|O60282-2|KIF5C	64.20726635412375	0.4601301477144759	4				NaN	NaN	0	NaN	2658	2493	5151
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5154	17.388	NaN	7417.2	30	0	1755.7	0.106	+			35102	SAGDVAVQK	9	60	437.7350425191892	873.4555321051785	2	437.73486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAGDVAVQK_	ENSG00000164574|ENST00000297107|GALNT10;ENST00000517958.1_1_5:153783698-153796529:+|nuORF;ENST00000520647.5_1_5:153755841-153792087:+|nuORF;nc|ENSG00000164574|Q86SR1-2|GALNT10;nc|ENSG00000164574|Q86SR1-4|GALNT10	129.42129120953632	0.01549634589885217	4				NaN	NaN	0	NaN	2659	2493	5151
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5155	17.389	NaN	3859.2	30	0	974.16	0.106			+	31717	QNVAQISV	8	51	429.737672754228	857.460792575256	2	429.73736572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QNVAQISV_	REV__ENSG00000164164|ENST00000447906|OTUD4;REV__ENST00000237841.5_1_12:3949907-3950609:+|nuORF;REV__ENST00000455611.6_1_4:146049153-146095893:-|nuORF;REV__nc|ENSG00000164164|Q01804-3|OTUD4;REV__nc|ENSG00000164164|Q01804-5|OTUD4	51.33545320467046	0.5859736979383976	4				NaN	NaN	0	NaN	2660	2493	5151
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5156	17.391	NaN	2097.1	30	0	241.26	0.106	+			42567	TASKAIIEK	9	56	480.7896728515625	NaN	0	480.7896728515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TASKAIIEK_	ADD1|p.K718Rfs*11|2|0.23|ENSG00000087274|chr4:2928458-2928458|A/-|frameshift_variant;ENSG00000087274|ENST00000683351|ADD1;ENST00000513762.2_1_4:2911056-2928400:+|nuORF;nc|ENSG00000087274|P35611-2|ADD1;nc|ENSG00000087274|P35611-3|ADD1;nc|ENSG00000087274|P35611-4|ADD1;nc|ENSG00000087274|P35611-6|ADD1;nc|ENSG00000087274|P35611|ADD1	38.753607047826485	0.28190821760017076	4				NaN	NaN	0	NaN	2661	2493	5151
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5157	17.393	NaN	1981.4	30	0	193.46	0.106			+	33516	RKQLDISWKFK	11	57	483.61606211514186	1447.8263569456255	3	483.6158447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RKQLDISWKFK_	REV__ENSG00000164951|ENST00000297598|PDP1;REV__nc|ENSG00000164951|Q9P0J1-2|PDP1	17.16674453292914	0.7901079503840427	4				NaN	NaN	0	NaN	2662	2493	5151
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5158	17.395	NaN	4829.4	30	0	2013.3	0.039	+			45024	TVFPKAKQVKK	11	54	425.2714213039284	1272.7924345119852	3	425.2713317871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TVFPKAKQVKK_	DDX21|p.I198Hfs*12|1|0.07|ENSG00000165732|chr10:68962140-68962141|-/ACATCACT|frameshift_variant;DDX21|p.N117Mfs*9|1|0.26|ENSG00000165732|chr10:68960063-68960063|A/-|frameshift_variant;ENSG00000165732|ENST00000354185|DDX21	28.5767321226876	0.690044582712672	4				NaN	NaN	0	NaN	2663	2493	5151
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5176	17.431	NaN	52256	30	0	22071	0.214	+			2842	ASAKEGTAFR	10	59	346.5171641019179	1036.5296629059537	3	346.51727294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASAKEGTAFR_	ENSG00000168757|ENST00000320701|TSPY2;ENSG00000228927|ENST00000457222|TSPY3;ENSG00000229549|ENST00000287721|TSPY8;ENSG00000233803|ENST00000426950|TSPY4;ENSG00000236424|ENST00000428845|TSPY10;ENSG00000238074|ENST00000440215|TSPY9;ENSG00000258992|ENST00000451548|TSPY1;nc|ENSG00000258992|Q01534-2|TSPY1	47.95952297671804	0.47580206326914537	4				NaN	NaN	0	NaN	2678	2496	5175
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5177	17.435	NaN	2125.3	30	0	531.05	0.106			+	50298	WSKWGKEN	8	55	517.7555580035989	1033.4965630739978	2	517.7555541992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WSKWGKEN_	REV__DNAH8|p.D4227Afs*7|1|0.04|ENSG00000124721|chr6:39008929-39008930|-/CAGTGTT|frameshift_variant;REV__ENSG00000124721|ENST00000327475|DNAH8;REV__nc|ENSG00000124721|Q96JB1-2|DNAH8;REV__nc|ENSG00000124721|Q96JB1|DNAH8	55.50420428727701	0.5462892107279674	4				NaN	NaN	0	NaN	2679	2496	5175
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5178	17.437	NaN	6383.2	30	0	3120.2	0.106	+			22822	KVFTYAKNK	9	57	366.881776428181	1097.623499884743	3	366.8814697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KVFTYAKNK_	ENSG00000123983|ENST00000357430|ACSL3	68.84614121027924	0.14577793175421136	4				NaN	NaN	0	NaN	2680	2496	5175
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5179	17.439	NaN	975.98	30	0	333.86	0.038	+			37776	SLVVLICSIPL	11	29	386.23992919921875	NaN	0	386.23992919921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLVVLICSIPL_	ENSG00000171522|ENST00000302472|PTGER4;ENST00000513635.1_1_5:40681836-40685490:+|nuORF	31.634271133179894	0.4244354679066847	4				NaN	NaN	0	NaN	2681	2496	5175
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5197	17.476	NaN	5191.6	30	0	1060.5	0.214	+			11297	FKMYLGIT	8	59	486.7643052248802	971.5140575165605	2	486.7642517089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FKMYLGIT_	ENSG00000054116|ENST00000373166|TRAPPC3;ENSG00000173626|ENST00000368602|TRAPPC3L;ENST00000462715.1_1_1:36603336-36605749:-|nuORF;nc|ENSG00000054116|O43617-2|TRAPPC3	57.81127852772723	0.5234495074909924	4				NaN	NaN	0	NaN	2696	2499	5196
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5198	17.48	NaN	3655.9	30	0	445.48	0.106	+			31422	QKLWKSYVK	9	67	590.3458862304688	NaN	0	590.3458862304688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QKLWKSYVK_	ENSG00000113360|ENST00000344624|DROSHA;ENST00000509608.1_1_5:31464267-31468068:-|nuORF;nc|ENSG00000113360|Q9NRR4-2|DROSHA;nc|ENSG00000113360|Q9NRR4-3|DROSHA;nc|ENSG00000113360|Q9NRR4-4|DROSHA	85.86182877749512	0.05129763505578642	4				NaN	NaN	0	NaN	2697	2499	5196
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5199	17.482	NaN	8858.6	30	0	549.61	0.106	+			38927	SSQLIIMLFK	10	79	393.89978464977406	NaN	0	393.8996276855469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSQLIIMLFK_	TDRD1|p.L1075F|1|0.5|ENSG00000095627|chr10:114227121-114227121|A/T|missense_variant	38.753607047826485	0.3729281687199363	4				NaN	NaN	0	NaN	2698	2499	5196
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5200	17.484	NaN	12121	30	0	934.06	0.106	+			38281	SQQKVVITK	9	78	515.8160100820703	1029.6174672309405	2	515.816650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SQQKVVITK_	ENSG00000007952|ENST00000372966|NOX1;ENSG00000165168|ENST00000378588|CYBB;nc|ENSG00000007952|Q9Y5S8-3|NOX1;NOX1|p.R290H|1|0.17|ENSG00000007952|chrX:100851261-100851261|C/T|missense_variant	150.81021883065287	0.006680279908938716	4				NaN	NaN	0	NaN	2699	2499	5196
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5201	17.486	NaN	3859.2	30	0	1411.1	0.106				-1	AVCAKRFTQK	10	53	403.55682373046875	NaN	0	403.55682373046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_AVC(Carbamidomethyl (C))AKRFTQK_	ENSG00000119574|ENST00000594051|ZBTB45	25.125986553469783	0.41767453237088564	4				NaN	NaN	0	NaN	2700	2499	5196
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5202	17.487	NaN	5299.1	30	0	1611.6	0.038	+			38261	SQNRPAAARTF	11	50	406.8841226223009	1217.6305384671027	3	406.8843078613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SQNRPAAARTF_	ENSG00000105953|ENST00000222673|OGDH;nc|ENSG00000105953|Q02218-2|OGDH;nc|ENSG00000105953|Q02218-3|OGDH;OGDH|p.L150Wfs*131|1|0.24|ENSG00000105953|chr7:44647686-44647686|C/-|frameshift_variant;OGDH|p.N950Qfs*3|2|0.28|ENSG00000105953|chr7:44707628-44707629|-/C|frameshift_variant	44.639436926238396	0.4944613868569842	4				NaN	NaN	0	NaN	2701	2499	5196
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5203	17.488	NaN	826.42	30	0	76.056	0.139	+			35588	SAYRALAGA	9	41	440.23736572265625	NaN	0	440.23736572265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SAYRALAGA_	DNAH7|p.V1621A|1|0.09|ENSG00000118997|chr2:195895010-195895010|A/G|missense_variant	31.954861631926434	0.3162336699109506	4				NaN	NaN	0	NaN	2702	2499	5196
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5221	17.527	NaN	7428.8	30	0	706.18	0.214			+	10791	FAHILFMQA	9	80	539.2804953381627	1076.5464377431254	2	539.2813110351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FAHILFMQA_	REV__ENSG00000205495|ENST00000380370|OR52J3	65.80317337860623	0.1652391959156183	4				NaN	NaN	0	NaN	2717	2502	5220
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5222	17.531	NaN	21784	30	0	3913.2	0.106	+			22098	KSMNANTITK	10	80	554.2948795140851	1106.57520609497	2	554.2955322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KSMNANTITK_	ENSG00000175467|ENST00000312397|SART1	187.15520657039602	0.0005195987910081399	4				NaN	NaN	0	NaN	2718	2502	5220
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5223	17.533	NaN	4292.4	30	0	1577.5	0.106	+			35798	SEAKPAAVA	9	49	422.2320228101811	842.4494926871622	2	422.2320251464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEAKPAAVA_	ENSG00000137076|ENST00000314888|TLN1;ENST00000486788.2_1_9:35704327-35706084:-|nuORF;nc|ENSG00000137076|Q9Y490-2|TLN1	66.42927471994793	0.16001998865088202	4				NaN	NaN	0	NaN	2719	2502	5220
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5224	17.535	NaN	5484.2	30	0	1069.6	0.106			+	3451	ASQSKDGEKK	10	39	359.85633957710195	1076.547189331506	3	359.8564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASQSKDGEKK_	REV__ENSG00000111011|ENST00000331738|RSRC2;REV__ENST00000392442.6_1_12:122990076-122998315:-|nuORF;REV__ENST00000433877.6_1_12:122990076-123005058:-|nuORF;REV__nc|ENSG00000111011|Q7L4I2-2|RSRC2	42.33807565288922	0.5276008846745733	4				NaN	NaN	0	NaN	2720	2502	5220
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5225	17.537	NaN	4599.8	30	0	1169.5	0.106	+			37227	SKNLTKENEQ	10	45	397.54029607979135	NaN	0	397.5400695800781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SKNLTKENEQ_	ENSG00000162745|ENST00000294794|OLFML2B;OLFML2B|p.L668Sfs*57|1|0.37|ENSG00000162745|chr1:161983927-161983927|C/-|frameshift_variant;OLFML2B|p.T394Nfs*93|1|0.33|ENSG00000162745|chr1:161998118-161998119|-/T|frameshift_variant	61.691277971877994	0.22046696034287383	4				NaN	NaN	0	NaN	2721	2502	5220
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5226	17.538	NaN	1481.9	30	0	255.29	0.106			+	19835	KEEAVKLA	8	53	444.2635498046875	NaN	0	444.2635498046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KEEAVKLA_	REV__tr|U7SXX3|U7SXX3_FUSNUUridinephosphorylaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00947PE=3SV=1	31.954861631926434	1.7418937515398478	4				NaN	NaN	0	NaN	2722	2502	5220
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5227	17.54	NaN	509.46	30	0	40.319	0.035			+	45740	VADRDQALK	9	31	508.2802429199219	NaN	0	508.2802429199219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VADRDQALK_	REV__L1PA5_dup2765|chr4:69723015-69726028:+|1.903650506224423|0.171219590839865|3.47|472.0|34|2|sense	20.94693142431847	0.3660861156085067	4				NaN	NaN	0	NaN	2723	2502	5220
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5245	17.577	NaN	22272	30	0	3916	0.214	+			32966	REDQKPVM	8	72	501.7551847366452	1001.4958165400905	2	501.7553405761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_REDQKPVM_	ENSG00000019582|ENST00000009530|CD74;ENST00000517791.1_1_5:149786694-149792396:-|nuORF;ENST00000522153.1_1_5:149786338-149792312:-|nuORF;ENST00000523836.5_1_5:149785806-149792312:-|nuORF;nc|ENSG00000019582|P04233-2|CD74;nc|ENSG00000019582|P04233-3|CD74	65.46538089061403	0.44767499471257033	4				NaN	NaN	0	NaN	2738	2505	5244
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5246	17.58	NaN	8452.8	30	0	1482.9	0.106	+			16379	HENESVYKA	9	68	538.7536793815148	1075.4928058298294	2	538.75439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HENESVYKA_	ENSG00000182481|ENST00000330459|KPNA2;ENST00000578492.5_1_17:62746826-62750158:-|nuORF	123.20810148215591	0.019257656778428764	4				NaN	NaN	0	NaN	2739	2505	5244
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5247	17.582	NaN	9262.6	30	0	3061.9	0.106			+	42568	TASKSALKTP	10	46	335.1973900411661	1002.5703407236983	3	335.1974792480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TASKSALKTP_	REV__ENSG00000153827|ENST00000675903|TRIP12;REV__ENST00000479037.5_1_2:230672327-230744801:-|nuORF;REV__nc|ENSG00000153827|Q14669-2|TRIP12;REV__nc|ENSG00000153827|Q14669-3|TRIP12;REV__nc|ENSG00000153827|Q14669|TRIP12;REV__TRIP12|p.H1434Afs*2|1|0.16|ENSG00000153827|chr2:229791143-229791144|-/T|frameshift_variant;REV__TRIP12|p.N880Kfs*36|1|0.21|ENSG00000153827|chr2:229804013-229804014|-/T|frameshift_variant;REV__TRIP12|p.S1195Lfs*24|6|0.27|ENSG00000153827|chr2:229796599-229796599|A/-|frameshift_variant;REV__TRIP12|p.Y1552Lfs*6|1|0.12|ENSG00000153827|chr2:229787620-229787621|-/A|frameshift_variant	40.05817265558897	0.5486090488315611	4				NaN	NaN	0	NaN	2740	2505	5244
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5248	17.584	NaN	5523.4	30	0	713.01	0.106	+			22547	KTRSCAGGLA	10	78	482.2559466484949	962.4973403637898	2	482.2556457519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTRSCAGGLA_	ENST00000436575.5_1_7:6485721-6523688:-|nuORF	82.7504851949679	0.1731497355276012	4				NaN	NaN	0	NaN	2741	2505	5244
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5249	17.586	NaN	2637.2	30	0	853.35	0.106			+	21840	KRGQAAIKD	9	39	329.52836633459566	NaN	0	329.19384765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KRGQAAIKD_	REV__ENSG00000184486|ENST00000328345|POU3F2;REV__ENSG00000185668|ENST00000373012|POU3F1;REV__ENSG00000196767|ENST00000644024|POU3F4;REV__ENSG00000198914|ENST00000361360|POU3F3;REV__nc|ENSG00000184486|P20265-2|POU3F2;REV__nc|ENSG00000184486|P20265-3|POU3F2;REV__nc|ENSG00000196767|P49335|POU3F4;REV__POU3F2|p.A368Lfs*31|1|0.23|ENSG00000184486|chr6:98835971-98835971|G/-|frameshift_variant;REV__POU3F4|p.E333Rfs*4|1|0.3|ENSG00000196767|chrX:83509316-83509316|A/-|frameshift_variant	30.317721548370564	0.32449924987115025	4				NaN	NaN	0	NaN	2742	2505	5244
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5250	17.588	NaN	4636.9	30	0	859.94	0.037	+			48490	VTMKQICKK	9	49	379.2156845137652	NaN	0	379.21563720703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_VTMKQIC(Carbamidomethyl (C))KK_	DEK|p.E372Sfs*2|1|0.2|ENSG00000124795|chr6:18226177-18226177|T/-|frameshift_variant;ENSG00000124795|ENST00000652689|DEK;nc|ENSG00000124795|P35659-2|DEK	60.11826168202944	0.14881452885248947	4				NaN	NaN	0	NaN	2743	2505	5244
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5251	17.588	NaN	830.75	30	0	92.657	0.141	+			31391	QKIRILEK	8	40	514.3350830078125	NaN	0	514.3350830078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QKIRILEK_	ENSG00000164631|ENST00000405858|ZNF12;nc|ENSG00000164631|P17014-2|ZNF12;nc|ENSG00000164631|P17014-4|ZNF12;nc|ENSG00000164631|P17014-5|ZNF12;ZNF12|p.F670Ifs*15|1|0.56|ENSG00000164631|chr7:6690934-6690935|-/T|frameshift_variant	74.25504064058377	1.7418937515398478	4				NaN	NaN	0	NaN	2744	2505	5244
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5269	17.628	NaN	27676	30	0	8794.5	0.214	+			4741	ATMPKKGILKK	11	91	405.5930099674966	1213.7572005026898	3	405.5931091308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATMPKKGILKK_	ENSG00000074590|ENST00000261402|NUAK1;NUAK1|p.P507Rfs*6|1|0.5|ENSG00000074590|chr12:106067268-106067268|G/-|frameshift_variant	65.2775769800794	0.27634548443598095	4				NaN	NaN	0	NaN	2759	2508	5268
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5270	17.631	NaN	4090.1	30	0	2067.8	0.106	+			48357	VTGPSASPPPH	11	43	523.7666970211895	1045.518841109179	2	523.767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTGPSASPPPH_	ENST00000458176.5_1_X:123095593-123156435:+|nuORF	35.61828744233558	0.616184410043185	4				NaN	NaN	0	NaN	2760	2508	5268
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5271	17.633	NaN	1681.6	30	0	210.57	0.106	+			139	AAGPTKPAA	9	43	392.2214589982548	782.4283650633096	2	392.22137451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AAGPTKPAA_	ENSG00000102195|ENST00000218316|GPR50	35.61828744233558	0.47037581924408073	4				NaN	NaN	0	NaN	2761	2508	5268
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5272	17.635	NaN	879.69	30	0	224.65	0.106	+			29118	NTSLVTALQ	9	39	473.7635141430243	NaN	0	473.763671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NTSLVTALQ_	ENSG00000124279|ENST00000264669|FASTKD3;FASTKD3|p.L285Yfs*3|1|0.19|ENSG00000124279|chr5:7867231-7867231|G/-|frameshift_variant;FASTKD3|p.P387Tfs*44|1|0.45|ENSG00000124279|chr5:7866925-7866926|-/T|frameshift_variant	36.446750945000026	0.29355505452396785	4				NaN	NaN	0	NaN	2762	2508	5268
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5273	17.637	NaN	938.9	30	0	138.71	0.106	+			34217	RTENIDIKK	9	36	372.8837890625	NaN	0	372.8837890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RTENIDIKK_	ENSG00000152904|ENST00000282841|GGPS1;nc|ENSG00000152904|O95749-2|GGPS1	38.714083909724	0.2821077617085494	4				NaN	NaN	0	NaN	2763	2508	5268
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5274	17.639	NaN	19496	30	0	5261.3	0.106	+			22140	KSQEAIKK	8	82	466.2820667966884	930.5495806601768	2	466.28192138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KSQEAIKK_	CFAP43|p.D1520Ifs*15|1|0.35|ENSG00000197748|chr10:104133658-104133658|C/-|frameshift_variant;CFAP43|p.V1381Wfs*7|1|0.2|ENSG00000197748|chr10:104143444-104143444|T/-|frameshift_variant;ENSG00000197748|ENST00000357060|CFAP43;nc|ENSG00000197748|Q8NDM7-2|CFAP43;nc|ENSG00000197748|Q8NDM7-3|CFAP43	134.81075121484326	0.23895231276701365	4				NaN	NaN	0	NaN	2764	2508	5268
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5275	17.64	NaN	302.68	30	0	24.939	0.036			+	-1	YSVACPRLT	9	23	526.264404296875	NaN	0	526.264404296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))YSVACPRLT_	REV__ENST00000518832.1_3_8:93029584-93115476:-|nuORF	10.265252068803164	0.4022383999429647	4				NaN	NaN	0	NaN	2765	2508	5268
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5293	17.678	NaN	34858	30	0	8766.2	0.214	+			42504	TANVGYDTK	9	69	484.7391720581363	967.4637911830727	2	484.7392883300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TANVGYDTK_	tr|U7SLW4|U7SLW4_FUSNUAutotransporterdomain-containingprotein(Fragment)OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01912PE=4SV=1;tr|U7SP80|U7SP80_FUSNUAutotransporterdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01760PE=4SV=1;tr|U7T6T2|U7T6T2_FUSNUAutotransporterdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00158PE=4SV=1	82.24051045832904	0.08786059719216216	4				NaN	NaN	0	NaN	2780	2511	5292
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5294	17.682	NaN	15501	30	0	2468.3	0.106	+			32976	REDSQRPGAHL	11	56	422.5497469275407	1264.6274113828222	3	422.5497131347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_REDSQRPGAHL_	chr12:54282662-54282800|482|460.96|0.0|25.46|+|ENST00000677249|HNRNPA1,HNRNPA1;ENSG00000135486|ENST00000340913|HNRNPA1;ENSG00000139675|ENST00000357495|HNRNPA1L2;ENST00000391992.3_1_12:9180728-9181528:-|nuORF;ENST00000422644.2_1_X:73693403-73693721:-|nuORF;ENST00000444886.1_1_9:128358162-128358726:+|nuORF;ENST00000457695.2_1_X:100110922-100111255:-|nuORF;ENST00000458678.1_1_1:241083162-241083366:+|nuORF;ENST00000510646.1_1_5:135764749-135765112:+|nuORF;ENST00000546565.1_1_12:93277549-93277891:+|nuORF;nc|ENSG00000135486|P09651-2|HNRNPA1;nc|ENSG00000135486|P09651-3|HNRNPA1	41.080066990542036	0.5431644350485484	4				NaN	NaN	0	NaN	2781	2511	5292
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5295	17.684	NaN	1893.8	30	0	246.06	0.106			+	-1	TGATRVPH	8	52	440.7352294921875	NaN	0	440.7352294921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))TGATRVPH_	REV__ENST00000555245.5_1_14:69925310-69925370:+|nuORF	38.80614096846853	1.7418937515398478	4				NaN	NaN	0	NaN	2782	2511	5292
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5296	17.685	NaN	6115.5	30	0	1889.7	0.106	+			6322	AVTDQTVSK	9	61	474.75324191708887	947.4919309009778	2	474.7532653808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVTDQTVSK_	COIL|p.N162Tfs*47|1|0.22|ENSG00000121058|chr17:56950757-56950757|T/-|frameshift_variant;ENSG00000121058|ENST00000240316|COIL	114.8945686534367	0.024290463251177924	4				NaN	NaN	0	NaN	2783	2511	5292
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5297	17.687	NaN	1479.4	30	0	730.14	0.106	+			25622	LQPPSILYG	9	47	494.27739580797135	986.5402386827427	2	494.2775573730469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LQPPSILYG_	AGO2|p.G422Afs*46|1|0.4|ENSG00000123908|chr8:140555900-140555900|C/-|frameshift_variant;AGO2|p.R688Pfs*2|1|0.33|ENSG00000123908|chr8:140539428-140539429|-/A|frameshift_variant;ENSG00000123908|ENST00000220592|AGO2;ENST00000521325.1_1_8:141565925-141566322:-|nuORF;nc|ENSG00000123908|Q9UKV8-2|AGO2	31.954861631926434	0.5046124803899898	4				NaN	NaN	0	NaN	2784	2511	5292
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5298	17.689	NaN	737.84	30	0	117.3	0.106			+	23185	KWQVSALF	8	39	489.7718811035156	NaN	0	489.7718811035156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KWQVSALF_	REV__ENSG00000104774|ENST00000456935|MAN2B1;REV__ENST00000469423.1_1_19:12757436-12758173:-|nuORF;REV__nc|ENSG00000104774|O00754-2|MAN2B1	29.14955571784316	1.7418937515398478	4				NaN	NaN	0	NaN	2785	2511	5292
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5299	17.691	NaN	1280.9	30	0	218.35	0.033			+	43317	TGALLLHLG	9	46	447.77392578125	NaN	0	447.77392578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TGALLLHLG_	REV__ENST00000409492.1_1_2:172950333-172951818:+|nuORF	33.51558372728122	0.30835390848773375	4				NaN	NaN	0	NaN	2786	2511	5292
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5317	17.728	NaN	123310	30	0	22012	0.214				-1	SQKLEARCRG	10	104	402.21196678753665	1203.61407096281	3	402.2121276855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SQKLEARC(Carbamidomethyl (C))RG_	ENST00000399640.3_1_8:134471412-134471994:-|nuORF	63.53385203322761	0.33370026130094593	4				NaN	NaN	0	NaN	2801	2514	5316
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5318	17.732	NaN	2266	30	0	253.32	0.106			+	28553	NKADKLANK	9	58	501.2904385998276	NaN	0	501.27227783203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NKADKLANK_	REV__KRT1|p.E434K|1|0.29|ENSG00000167768|chr12:52676450-52676450|C/T|missense_variant	72.2432373244024	0.09796301979040985	4				NaN	NaN	0	NaN	2802	2514	5316
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5319	17.734	NaN	5767.1	30	0	990.21	0.106	+			20687	KGPGAARAL	9	48	420.75600429086313	839.4974556485263	2	420.7560729980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KGPGAARAL_	ENST00000483273.2_1_1:16133986-16134037:-|nuORF	51.33545320467046	0.2872990594074956	4				NaN	NaN	0	NaN	2803	2514	5316
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5320	17.736	NaN	7240.7	30	0	2090.3	0.106	+			49177	VVMRDPNTK	9	57	530.2839280052302	1058.5533030772604	2	530.2848510742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVMRDPNTK_	chr12:54282662-54282800|482|460.96|0.0|25.46|+|ENST00000677249|HNRNPA1,HNRNPA1;ENSG00000135486|ENST00000340913|HNRNPA1;ENSG00000139675|ENST00000357495|HNRNPA1L2;ENSG00000224578|ENST00000565308|HNRNPA1L3;ENST00000441603.1_1_11:5593122-5593311:-|nuORF;ENST00000452488.1_1_2:41383770-41384067:+|nuORF;ENST00000457695.2_1_X:100110922-100111255:-|nuORF;ENST00000575692.1_1_17:2210089-2210875:+|nuORF;nc|ENSG00000135486|P09651-2|HNRNPA1;nc|ENSG00000135486|P09651-3|HNRNPA1	75.65223720490533	0.11634833104049533	4				NaN	NaN	0	NaN	2804	2514	5316
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5321	17.738	NaN	7770.2	30	0	2148.3	0.106	+			41869	SVTGVTASK	9	62	425.2374227680348	848.4602926028696	2	425.2372741699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVTGVTASK_	ENSG00000153046|ENST00000397588|CDYL;ENST00000472453.5_1_6:4776866-4954287:+|nuORF;nc|ENSG00000153046|Q9Y232-3|CDYL;nc|ENSG00000153046|Q9Y232-4|CDYL;nc|ENSG00000153046|Q9Y232|CDYL	61.691277971877994	0.19951612995419254	4				NaN	NaN	0	NaN	2805	2514	5316
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5322	17.739	NaN	978.62	30	0	106.44	0.106	+			12219	GARPVPGP	8	40	375.7162780761719	NaN	0	375.7162780761719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GARPVPGP_	ENST00000278935.7_2_11:117283502-117283925:+|nuORF	15.63621529709179	1.7418937515398478	4				NaN	NaN	0	NaN	2806	2514	5316
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5323	17.741	NaN	16885	30	0	7202.5	0.038	+			40917	SVFQQGMKNK	10	49	394.8691343558436	1181.5855736677308	3	394.8694763183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_SVFQQGM(Oxidation (M))KNK_	ENSG00000018625|ENST00000361216|ATP1A2;ENSG00000105409|ENST00000648268|ATP1A3;ENSG00000163399|ENST00000295598|ATP1A1;ENST00000479960.1_1_1:116943772-116944278:+|nuORF;nc|ENSG00000105409|P13637-2|ATP1A3;nc|ENSG00000105409|P13637-3|ATP1A3;nc|ENSG00000163399|P05023-3|ATP1A1;nc|ENSG00000163399|P05023-4|ATP1A1	46.45678178249821	0.4896490706773647	4				NaN	NaN	0	NaN	2807	2514	5316
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5341	17.779	NaN	42646	30	0	11820	0.214				-1	 	0	50	361.22059885693164	720.4266447806633	2	361.22064208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2822	2517	5340
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5342	17.782	NaN	14865	30	0	4806.9	0.106	+			22115	KSNNTAYLIY	10	58	396.20829793707503	1185.603064411425	3	396.2085266113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KSNNTAYLIY_	ENSG00000137976|ENST00000370665|DNASE2B	49.536043120802724	0.461275219792494	4				NaN	NaN	0	NaN	2823	2517	5340
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5343	17.784	NaN	3203.5	30	0	406.68	0.106	+			21433	KNALKDAKN	9	69	501.2904385998276	NaN	0	501.2904052734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KNALKDAKN_	KRT1|p.E434K|1|0.29|ENSG00000167768|chr12:52676450-52676450|C/T|missense_variant	88.17693792209575	0.04527150213038833	4				NaN	NaN	0	NaN	2824	2517	5340
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5344	17.786	NaN	2940.4	30	0	459.09	0.106			+	461	AAVMGAEAAL	10	56	460.23118572503915	918.4478185168783	2	460.23114013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_AAVM(Oxidation (M))GAEAAL_	REV__ENSG00000128482|ENST00000461366|RNF112;REV__nc|ENSG00000128482|Q9ULX5-2|RNF112	82.30502934623384	0.17678907142465278	4				NaN	NaN	0	NaN	2825	2517	5340
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5345	17.788	NaN	1769.1	30	0	180.06	0.106	+			10050	ESEIQRLSE	9	58	545.7723904791922	NaN	0	545.7725219726562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ESEIQRLSE_	ENSG00000114019|ENST00000249883|AMOTL2;ENST00000506326.1_1_3:134076549-134085275:-|nuORF;nc|ENSG00000114019|Q9Y2J4-3|AMOTL2;nc|ENSG00000114019|Q9Y2J4-4|AMOTL2;nc|ENSG00000114019|Q9Y2J4|AMOTL2	54.776311868738084	0.17377682019723872	4				NaN	NaN	0	NaN	2826	2517	5340
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5346	17.79	NaN	1341.6	30	0	211.13	0.036	+			21750	KQNSQMIVK	9	58	538.2997436523438	NaN	0	538.2997436523438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KQNSQMIVK_	ENSG00000196535|ENST00000527372|MYO18A;nc|ENSG00000196535|Q92614-3|MYO18A;nc|ENSG00000196535|Q92614-4|MYO18A	61.76455937419982	0.141793055474112	4				NaN	NaN	0	NaN	2827	2517	5340
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5347	17.79	NaN	4122.3	30	0	1341.2	0.14			+	1628	AGMKLWRQ	8	59	495.26982592344126	988.5250989136825	2	495.26953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AGMKLWRQ_	REV__ENST00000422911.5_1_21:43279713-43299449:-|nuORF	50.0245360154114	0.5941082100236891	4				NaN	NaN	0	NaN	2828	2517	5340
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5365	17.83	NaN	40200	30	0	15272	0.214	+			23149	KVYDKAINR	9	79	369.5485316970254	1105.6237656912763	3	369.548583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVYDKAINR_	ENSG00000164190|ENST00000282516|NIPBL;ENST00000514335.1_1_5:37051847-37064632:+|nuORF;nc|ENSG00000164190|Q6KC79-2|NIPBL;NIPBL|p.I2776Lfs*3|1|0.17|ENSG00000164190|chr5:37064797-37064797|A/-|frameshift_variant	83.6470233535746	0.08277643980271215	4				NaN	NaN	0	NaN	2843	2520	5364
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5366	17.833	NaN	1763.2	30	0	155.93	0.106	+			16518	HEVEKSEI	8	56	485.7451171875	NaN	0	485.7451171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HEVEKSEI_	ENSG00000050405|ENST00000341247|LIMA1;LIMA1|p.T536Lfs*38|2|0.4|ENSG00000050405|chr12:50177739-50177739|G/-|frameshift_variant;nc|ENSG00000050405|Q9UHB6-2|LIMA1;nc|ENSG00000050405|Q9UHB6-4|LIMA1;nc|ENSG00000050405|Q9UHB6-5|LIMA1	87.69643885390035	1.7418937515398478	4				NaN	NaN	0	NaN	2844	2520	5364
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5367	17.835	NaN	13443	30	0	3734.2	0.106	+			5749	AVGGGYTAK	9	72	412.21886262811125	822.4231723230225	2	412.2189636230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVGGGYTAK_	ENSG00000198836|ENST00000361510|OPA1;ENST00000487986.1_1_3:193332581-193346300:+|nuORF;nc|ENSG00000198836|O60313-11|OPA1;nc|ENSG00000198836|O60313-13|OPA1;nc|ENSG00000198836|O60313-2|OPA1;nc|ENSG00000198836|O60313-9|OPA1;nc|ENSG00000198836|O60313|OPA1	51.19269402634007	0.2889735674168909	4				NaN	NaN	0	NaN	2845	2520	5364
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5368	17.837	NaN	1767.2	30	0	190.31	0.106			+	28538	NILSVAKK	8	45	436.78159367322286	NaN	0	436.7816467285156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NILSVAKK_	REV__COMMD10|p.R102Hfs*8|1|0.07|ENSG00000145781|chr5:116092604-116092605|-/CATACTG|frameshift_variant;REV__ENSG00000145781|ENST00000274458|COMMD10	56.72105179125745	1.7418937515398478	4				NaN	NaN	0	NaN	2846	2520	5364
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5369	17.839	NaN	1785.9	30	0	745.84	0.106	+			24469	LGGGCWRIFQF	11	41	428.55039592214996	NaN	0	428.21673583984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LGGGCWRIFQF_	ENST00000233809.8_2_2:217528899-217528932:+|nuORF	20.030474535948922	0.456735970842152	4				NaN	NaN	0	NaN	2847	2520	5364
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5370	17.841	NaN	1631.4	30	0	134.43	0.033			+	22059	KSKLGNQK	8	62	451.7740783691406	NaN	0	451.7740783691406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KSKLGNQK_	REV__ENSG00000169330|ENST00000305428|MINAR1	60.97194046774394	1.7418937515398478	4				NaN	NaN	0	NaN	2848	2520	5364
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5371	17.841	NaN	1276.2	30	0	228.29	0.139			+	18366	IQPPWAAPT	9	49	490.76373291015625	NaN	0	490.76373291015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IQPPWAAPT_	REV__ENST00000566889.5_1_16:89865039-89865339:-|nuORF	29.14955571784316	0.3303970763161698	4				NaN	NaN	0	NaN	2849	2520	5364
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5389	17.881	NaN	18402	30	0	2116.2	0.214	+			43092	TENPHGARL	9	78	497.7566001843276	993.4986474354553	2	497.7565612792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TENPHGARL_	ENSG00000243725|ENST00000371281|TTC4	75.04331003522576	0.118981335847003	4				NaN	NaN	0	NaN	2864	2523	5388
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5390	17.884	NaN	105960	30	0	45248	0.106	+			14618	GTGKTLIGK	9	94	437.771291576985	873.52803022077	2	437.7710876464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTGKTLIGK_	ENSG00000132436|ENST00000433017|FIGNL1;FIGNL1|p.C453R|1|0.23|ENSG00000132436|chr7:50445931-50445931|A/G|missense_variant;nc|ENSG00000132436|Q6PIW4-2|FIGNL1	155.5846463517096	0.005567437401040498	4				NaN	NaN	0	NaN	2865	2523	5388
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5391	17.886	NaN	8148.5	30	0	2032.3	0.106	+			40018	STMSTSCAR	9	56	472.2017504811007	942.3889480290014	2	472.2017822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STMSTSCAR_	ENST00000282388.3_2_2:43452860-43453537:-|nuORF	120.8684288430529	0.02067403653475984	4				NaN	NaN	0	NaN	2866	2523	5388
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5392	17.888	NaN	150320	30	0	17169	0.106	+			16572	HFNMFTGKFYC	11	98	465.5391417301608	1393.5955957906824	3	465.5391845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HFNMFTGKFYC_	ENSG00000173918|ENST00000579760|C1QTNF1;ENST00000582625.1_1_17:77043224-77044167:+|nuORF;nc|ENSG00000173918|Q9BXJ1-2|C1QTNF1	38.714083909724	0.5755383074156426	4				NaN	NaN	0	NaN	2867	2523	5388
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5393	17.89	NaN	14248	30	0	4278	0.106	+			22309	KTETPIVSK	9	66	501.79486855533736	1001.5751841774747	2	501.794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KTETPIVSK_	ENSG00000124164|ENST00000475243|VAPB;ENST00000463370.5_1_20:57007450-57019288:+|nuORF;ENST00000476395.1_1_20:57015848-57019288:+|nuORF	169.6522961985778	0.0028262690464207238	4				NaN	NaN	0	NaN	2868	2523	5388
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5394	17.892	NaN	1491.3	30	0	252.39	0.037	+			21033	KKKKEQLQQ	9	39	579.353759765625	NaN	0	579.353759765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KKKKEQLQQ_	ENSG00000154305|ENST00000344922|MIA3;MIA3|p.P1645Yfs*19|1|0.06|ENSG00000154305|chr1:222659963-222659964|-/TATAG|frameshift_variant;nc|ENSG00000154305|Q5JRA6-4|MIA3	32.81241826257853	0.3119040447479903	4				NaN	NaN	0	NaN	2869	2523	5388
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5395	17.892	NaN	1550.6	30	0	275.54	0.144			+	3135	ASHLIRLSR	9	35	351.5476182995338	NaN	0	351.21331787109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASHLIRLSR_	REV__ENSG00000082684|ENST00000357599|SEMA5B;REV__nc|ENSG00000082684|Q9P283-2|SEMA5B;REV__nc|ENSG00000082684|Q9P283-3|SEMA5B;REV__nc|ENSG00000082684|Q9P283-4|SEMA5B;REV__SEMA5B|p.A539T|1|0.43|ENSG00000082684|chr3:122921988-122921988|C/T|missense_variant;REV__SEMA5B|p.Q905Rfs*147|1|0.47|ENSG00000082684|chr3:122912855-122912855|G/-|frameshift_variant	19.996771675451527	0.3693019437812985	4				NaN	NaN	0	NaN	2870	2523	5388
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5414	17.932	NaN	16616	30	0	5681.5	0.214	+			22584	KTSTVFSSK	9	69	492.7714788140123	983.5284046948246	2	492.771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTSTVFSSK_	nc|ENSG00000196275|Q86UP8-4|GTF2IRD2	133.9934435666947	0.013297982075521412	4				NaN	NaN	0	NaN	2886	2526	5413
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5415	17.935	NaN	6084.1	30	0	2330.2	0.106	+			14230	GSSSASIVK	9	51	418.22934550137995	834.4441380695599	2	418.2293701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSSSASIVK_	DSG2|p.I845*|1|0.27|ENSG00000046604|chr18:31545914-31545914|A/-|frameshift_variant;ENSG00000046604|ENST00000261590|DSG2	82.7504851949679	0.08565546331141553	4				NaN	NaN	0	NaN	2887	2526	5413
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5416	17.938	NaN	5424.2	30	0	2799.9	0.106	+			21596	KPKANSEHNG	10	55	541.2733947731589	1080.5322366131177	2	541.2740478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KPKANSEHNG_	ENSG00000164070|ENST00000296464|HSPA4L	42.86426827375447	0.522752283233888	4				NaN	NaN	0	NaN	2888	2526	5413
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5417	17.939	NaN	7478.7	30	0	5103	0.106	+			46632	VGASLEPRSL	10	36	343.52917473968625	1027.5656948192589	3	343.5292663574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VGASLEPRSL_	nc|ENSG00000183914|Q9P225-3|DNAH2	16.473147378115264	0.7327422906225664	4				NaN	NaN	0	NaN	2889	2526	5413
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5418	17.941	NaN	91958	30	0	22274	0.106	+			19421	KAPSAARSL	9	88	450.7662900484853	899.5180271637706	2	450.7664794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KAPSAARSL_	ENSG00000083937|ENST00000263780|CHMP2B;ENST00000466696.1_1_3:87302513-87302969:+|nuORF;nc|ENSG00000083937|Q9UQN3-2|CHMP2B	78.26377905018397	0.10505600812668463	4				NaN	NaN	0	NaN	2890	2526	5413
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5419	17.943	NaN	2915.7	30	0	861.52	0.035	+			44599	TTDKETVLK	9	60	517.7894325721965	1033.5643122111928	2	517.7899169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TTDKETVLK_	ENSG00000176148|ENST00000334274|TCP11L1	61.691277971877994	0.19951612995419254	4				NaN	NaN	0	NaN	2891	2526	5413
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5420	17.944	NaN	7869.6	30	0	2943	0.14	+			16135	HEAEGHIVT	9	64	496.74314715047007	991.4717413677402	2	496.7433776855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HEAEGHIVT_	ENSG00000100028|ENST00000215829|SNRPD3;ENST00000468770.1_1_22:24953642-24953888:+|nuORF;nc|ENSG00000286070|P62318-2|SNRPD3	90.77665401227738	0.06267569666681755	4				NaN	NaN	0	NaN	2892	2526	5413
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5438	17.981	NaN	6575.1	30	0	1548.4	0.214				-1	 	0	51	352.21530727064504	702.4160616080901	2	352.21533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2907	2529	5437
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5439	17.985	NaN	11870	30	0	1294.1	0.106	+			34198	RTDEAAFQK	9	76	533.2695713979163	1064.5245898626324	2	533.27001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RTDEAAFQK_	ENSG00000196154|ENST00000368716|S100A4	125.71293069911285	0.017741295328254008	4				NaN	NaN	0	NaN	2908	2529	5437
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5440	17.987	NaN	17381	30	0	4023.1	0.106	+			40302	STSSSSPLR	9	60	461.23516964589277	920.4557863585856	2	461.235107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STSSSSPLR_	ENST00000223023.4_1_7:123388889-123389093:-|nuORF	95.81516180277367	0.04847050768394289	4				NaN	NaN	0	NaN	2909	2529	5437
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5441	17.989	NaN	2190.5	30	0	886.56	0.106			+	31582	QLRTGLCLE	9	61	516.7776567536627	NaN	0	516.7774658203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QLRTGLCLE_	REV__ENSG00000221843|ENST00000447166|C2orf16	49.44154591367651	0.21054156626303966	4				NaN	NaN	0	NaN	2910	2529	5437
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5442	17.99	NaN	1265.8	30	0	255.76	0.106			+	23947	LDRFQRRR	8	42	382.8924255371094	NaN	0	382.8924255371094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LDRFQRRR_	REV__ENSG00000085644|ENST00000396878|ZNF213;REV__ENST00000576863.1_1_16:3188364-3191345:+|nuORF;REV__nc|ENSG00000085644|O14771-2|ZNF213	21.9598887501803	1.7418937515398478	4				NaN	NaN	0	NaN	2911	2529	5437
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5443	17.992	NaN	1658.1	30	0	367.05	0.037	+			34036	RSLGPQPPLR	10	27	374.2242939149877	NaN	0	374.2243347167969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RSLGPQPPLR_	ENSG00000143434|ENST00000368914|SEMA6C;nc|ENSG00000143434|Q9H3T2-3|SEMA6C;SEMA6C|p.P861Lfs*37|2|0.24|ENSG00000143434|chr1:151132695-151132695|G/-|frameshift_variant	25.125986553469783	0.41767453237088564	4				NaN	NaN	0	NaN	2912	2529	5437
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5444	17.993	NaN	1601	30	0	307.42	0.142				-1	SISNVTAFFM	10	38	378.1839904785156	NaN	0	378.1839904785156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_SISNVTAFFM(Oxidation (M))_	ENSG00000185920|ENST00000331920|PTCH1;nc|ENSG00000185920|Q13635-2|PTCH1;nc|ENSG00000185920|Q13635-3|PTCH1;nc|ENSG00000185920|Q13635-4|PTCH1;PTCH1|p.P593Lfs*30|1|0.34|ENSG00000185920|chr9:95469884-95469884|A/-|frameshift_variant;PTCH1|p.R1308Efs*64|1|0.24|ENSG00000185920|chr9:95447335-95447335|G/-|frameshift_variant;PTCH1|p.S1203Afs*52|2|0.47|ENSG00000185920|chr9:95449267-95449267|G/-|frameshift_variant;PTCH1|p.Y1316Tfs*56|3|0.29|ENSG00000185920|chr9:95447311-95447311|G/-|frameshift_variant	27.047317107675042	0.41136583337917604	4				NaN	NaN	0	NaN	2913	2529	5437
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5463	18.032	NaN	21018	30	0	2123.7	0.214	+			34682	RVSSQLIQ	8	76	465.77177119905133	929.5289894649027	2	465.771728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVSSQLIQ_	ENSG00000180787|ENST00000318833|ZFP3;ZFP3|p.R273I|1|0.35|ENSG00000180787|chr17:5092322-5092322|G/T|missense_variant	71.29570347882199	0.39610197767395533	4				NaN	NaN	0	NaN	2929	2532	5462
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5464	18.035	NaN	17954	30	0	1784.4	0.106			+	-1	KYCENVGEWID	11	76	471.5429046085443	1411.606884425833	3	471.54290771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_KYC(Carbamidomethyl (C))ENVGEWID_	REV__ATG10|p.H133N|1|0.41|ENSG00000152348|chr5:82178531-82178531|C/A|missense_variant	43.41853373365257	0.5111670701941979	4				NaN	NaN	0	NaN	2930	2532	5462
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5465	18.038	NaN	4107.1	30	0	1358.8	0.106			+	43848	TLVHLPAMPAQ	11	48	393.21673583984375	NaN	0	393.21673583984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TLVHLPAMPAQ_	REV__ENSG00000168916|ENST00000513986|ZNF608;REV__nc|ENSG00000168916|Q9ULD9-2|ZNF608;REV__ZNF608|p.N1313Mfs*8|1|0.11|ENSG00000168916|chr5:124644429-124644429|T/-|frameshift_variant	36.31764250033197	0.4035636655321173	4				NaN	NaN	0	NaN	2931	2532	5462
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5466	18.039	NaN	4138	30	0	1154.5	0.106	+			47714	VSFLHAQKS	9	45	339.52319315121827	1015.5477500538548	3	339.5233459472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSFLHAQKS_	ENSG00000183476|ENST00000328828|SH2D7	37.15910966729921	0.4535818937225704	4				NaN	NaN	0	NaN	2932	2532	5462
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5467	18.041	NaN	49126	30	0	15503	0.106	+			4113	ATDYGTIKK	9	65	332.84992874238225	995.5279568273468	3	332.8501281738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATDYGTIKK_	ENSG00000112902|ENST00000382496|SEMA5A	58.22992032128504	0.22837015374068087	4				NaN	NaN	0	NaN	2933	2532	5462
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5468	18.043	NaN	4312.6	30	0	457.44	0.035	+			27059	MADPKGKAY	9	61	490.7472965492818	979.4800401653637	2	490.7470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MADPKGKAY_	ENSG00000137038|ENST00000358227|DMAC1;ENST00000469050.1_1_9:7798575-7833931:-|nuORF;ENST00000484082.1_1_9:7798575-7800059:-|nuORF;nc|ENSG00000137038|Q96GE9|DMAC1	71.87747018426188	0.13267044672804276	4				NaN	NaN	0	NaN	2934	2532	5462
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5469	18.044	NaN	2650	30	0	358.86	0.139	+			12784	GELSVSTDK	9	52	468.2376321339799	NaN	0	468.237548828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GELSVSTDK_	ENSG00000158683|ENST00000289672|PKD1L1;nc|ENSG00000158683|Q8TDX9-2|PKD1L1;PKD1L1|p.K1780Rfs*33|1|0.36|ENSG00000158683|chr7:47843068-47843068|T/-|frameshift_variant;PKD1L1|p.L2298Cfs*3|1|0.47|ENSG00000158683|chr7:47821148-47821148|A/-|frameshift_variant;PKD1L1|p.R2615Lfs*97|1|0.05|ENSG00000158683|chr7:47803328-47803329|-/TTTATCA|frameshift_variant;PKD1L1|p.R558Dfs*10|1|0.27|ENSG00000158683|chr7:47905176-47905176|T/-|frameshift_variant	40.77816245573522	0.2702456086868081	4				NaN	NaN	0	NaN	2935	2532	5462
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5488	18.082	NaN	12783	30	0	4654.6	0.214	+			4278	ATGGMANVK	9	71	424.71856312363036	847.4225733140607	2	424.7181396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATGGMANVK_	ENSG00000136936|ENST00000375128|XPA;XPA|p.A65T|1|0.24|ENSG00000136936|chr9:97693739-97693739|C/T|missense_variant	132.757866228626	0.013877640931359021	4				NaN	NaN	0	NaN	2951	2535	5487
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5489	18.085	NaN	37106	30	0	15982	0.106	+			44172	TQTDVKLK	8	78	466.77421488839593	931.5338768435919	2	466.77398681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TQTDVKLK_	EHBP1|p.N344Ifs*2|1|0.38|ENSG00000115504|chr2:62864894-62864894|A/-|frameshift_variant;EHBP1|p.T756Qfs*17|1|0.44|ENSG00000115504|chr2:62949001-62949001|A/-|frameshift_variant;ENSG00000115504|ENST00000431489|EHBP1;ENST00000494958.1_1_2:62934317-63053404:+|nuORF;nc|ENSG00000115504|Q8NDI1-2|EHBP1;nc|ENSG00000115504|Q8NDI1|EHBP1	107.00750918261382	0.24681273948614665	4				NaN	NaN	0	NaN	2952	2535	5487
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5490	18.087	NaN	17809	30	0	7005.7	0.106	+			39280	STARLWDHKK	10	75	414.56309038106525	1240.6674417433958	3	414.5630798339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STARLWDHKK_	ENST00000529974.1_1_11:88068229-88070878:-|nuORF	77.53327743719008	0.21577387331637743	4				NaN	NaN	0	NaN	2953	2535	5487
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5491	18.089	NaN	9503.4	30	0	3899.4	0.106	+			44580	TTCEQIVRK	9	47	378.86899684912805	1133.5851611475841	3	378.8692321777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_TTC(Carbamidomethyl (C))EQIVRK_	ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1;nc|ENSG00000125107|A5YKK6-4|CNOT1	47.657333605630114	0.33044192980041115	4				NaN	NaN	0	NaN	2954	2535	5487
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5492	18.091	NaN	11752	30	0	973.15	0.106			+	2768	ARLKDKVLQ	9	77	357.56069483069405	1069.6602550922821	3	357.56085205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ARLKDKVLQ_	REV__ENSG00000177853|ENST00000316045|ZNF518A;REV__nc|ENSG00000177853|Q6AHZ1-2|ZNF518A;REV__ZNF518A|p.I1254Nfs*11|1|0.18|ENSG00000177853|chr10:96160075-96160076|-/A|frameshift_variant;REV__ZNF518A|p.L1107Ffs*8|1|0.31|ENSG00000177853|chr10:96159635-96159636|-/T|frameshift_variant	76.7741389293348	0.11149722112137898	4				NaN	NaN	0	NaN	2955	2535	5487
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5493	18.093	NaN	1813.4	30	0	316.01	0.037	+			4137	ATEQEDAAVAK	11	56	566.777402791478	1131.540252649756	2	566.7778930664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATEQEDAAVAK_	ENSG00000125844|ENST00000377813|RRBP1;nc|ENSG00000125844|Q9P2E9-3|RRBP1;RRBP1|p.A628Gfs*69|1|0.35|ENSG00000125844|chr20:17621915-17621916|-/T|frameshift_variant	75.56570413236392	0.18934020192193834	4				NaN	NaN	0	NaN	2956	2535	5487
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5494	18.093	NaN	5641.9	30	0	1103.1	0.141	+			21159	KKVHSTIQK	9	58	534.8295234944302	1067.6444940556603	2	534.8298950195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KKVHSTIQK_	ENSG00000068784|ENST00000263736|SRBD1;SRBD1|p.T783Ifs*12|1|0.05|ENSG00000068784|chr2:45413279-45413280|-/CCAAA|frameshift_variant	82.7504851949679	0.08565546331141553	4				NaN	NaN	0	NaN	2957	2535	5487
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5512	18.132	NaN	3319.8	30	0	727.78	0.214	+			22489	KTNLTSVTK	9	53	496.2925629633906	990.5705729935812	2	496.29254150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTNLTSVTK_	ENSG00000197386|ENST00000355072|HTT;ENST00000510626.5_1_4:3131970-3189635:+|nuORF;HTT|p.H2238Ffs*6|1|0.28|ENSG00000197386|chr4:3212643-3212644|CA/-|frameshift_variant;HTT|p.P2413Hfs*44|1|0.6|ENSG00000197386|chr4:3217944-3217944|C/-|frameshift_variant;HTT|p.R1412H|1|0.18|ENSG00000197386|chr4:3174789-3174789|G/A|missense_variant	68.84614121027924	0.14577793175421136	4				NaN	NaN	0	NaN	2972	2538	5511
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5513	18.136	NaN	5471.5	30	0	1710.5	0.106	+			48384	VTHQSVGVVK	10	64	527.3061236426832	1052.5976943521664	2	527.3067016601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTHQSVGVVK_	ENSG00000128731|ENST00000261609|HERC2;ENST00000529624.5_3_15:28916682-28918849:+|nuORF;ENST00000567869.1_1_15:28436080-28447805:-|nuORF	140.11223852658463	0.010724162804194332	4				NaN	NaN	0	NaN	2973	2538	5511
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5514	18.138	NaN	4519.2	30	0	2097.4	0.106	+			14245	GSSSVAAMK	9	48	419.2102621169631	836.4059713007263	2	419.2101745605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GSSSVAAMK_	ENSG00000174021|ENST00000370645|GNG5;GNG5-NMI|1|fusion	32.81241826257853	0.4965981579233955	4				NaN	NaN	0	NaN	2974	2538	5511
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5515	18.14	NaN	17888	30	0	5957.4	0.106				-1	VVSVMAAARPG	11	56	358.5302823232442	1072.5690175699326	3	358.530517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_VVSVM(Oxidation (M))AAARPG_	ENST00000444836.5_1_1:12040386-12040536:+|nuORF	32.75053402867276	0.6462648045997152	4				NaN	NaN	0	NaN	2975	2538	5511
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5516	18.141	NaN	5929.4	30	0	1457.6	0.106				-1	KSRNCIVDGR	10	43	402.21196678753665	1203.61407096281	3	402.2121276855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_KSRNC(Carbamidomethyl (C))IVDGR_	ENSG00000132518|ENST00000254854|GUCY2D	36.31764250033197	0.5830761606467809	4				NaN	NaN	0	NaN	2976	2538	5511
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5517	18.143	NaN	14144	30	0	8370.2	0.038	+			41513	SVPREPIDRK	10	50	399.5629127036034	1195.6669087110101	3	399.56298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVPREPIDRK_	ENSG00000176946|ENST00000407315|THAP4	53.59686742100583	0.4240759338601513	4				NaN	NaN	0	NaN	2977	2538	5511
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5518	18.144	NaN	775.32	30	0	121.28	0.14			+	32175	QSSDPDAPRA	10	44	522.2412800511329	1042.4680071690657	2	522.2415771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QSSDPDAPRA_	REV__ENST00000166139.8_1_19:682587-683214:+|nuORF	40.77816245573522	0.5419747034533848	4				NaN	NaN	0	NaN	2978	2538	5511
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5536	18.183	NaN	119180	30	0	85505	0.214	+			5858	AVIQGQAVRK	10	62	357.22055641042954	1068.6398398314886	3	357.2206726074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVIQGQAVRK_	ENSG00000099812|ENST00000215582|MISP	85.16082228582465	0.15877915086237185	4				NaN	NaN	0	NaN	2993	2541	5535
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5537	18.187	NaN	3928.8	30	0	636.82	0.106			+	25177	LLYKKEGSS	9	61	512.7870925032765	1023.5596320733531	2	512.7872924804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LLYKKEGSS_	REV__AFP|p.N348Kfs*10|1|0.39|ENSG00000081051|chr4:73447654-73447655|-/A|frameshift_variant	60.97194046774394	0.20551255781574032	4				NaN	NaN	0	NaN	2994	2541	5535
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5538	18.189	NaN	88861	30	0	20899	0.106	+			38506	SSAVTSVAK	9	82	425.2373278154398	848.4601026976796	2	425.2373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSAVTSVAK_	ENSG00000165949|ENST00000612813|IFI27;nc|ENSG00000165949|P40305-1|IFI27	138.06239232086	0.011389075116295402	4				NaN	NaN	0	NaN	2995	2541	5535
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5539	18.191	NaN	12419	30	0	4132.9	0.106	+			3892	ATAQFKINKK	10	52	383.56423295955415	1147.6708694788624	3	383.56427001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATAQFKINKK_	ENSG00000143228|ENST00000271452|NUF2;NUF2|p.I401Nfs*2|1|0.3|ENSG00000143228|chr1:163349015-163349016|-/A|frameshift_variant	50.033510581677724	0.4566913063131936	4				NaN	NaN	0	NaN	2996	2541	5535
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5540	18.192	NaN	5593.9	30	0	865.82	0.106				-1	 	0	64	450.2734715145458	449.2661950479458	1	450.27447509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2997	2541	5535
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5541	18.194	NaN	3000.5	30	0	665.27	0.038			+	17951	IGQQWAQLTIG	11	44	405.5542907714844	NaN	0	405.5542907714844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IGQQWAQLTIG_	REV__ENSG00000197629|ENST00000361050|MPEG1;REV__ENST00000532980.3_1_11:59055317-59056556:-|nuORF	31.634271133179894	0.4244354679066847	4				NaN	NaN	0	NaN	2998	2541	5535
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5542	18.195	NaN	8085.2	30	0	674.32	0.138	+			34905	SAAEASRAM	9	68	447.21066182702384	892.4067707208477	2	447.2106018066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SAAEASRAM_	ENSG00000101940|ENST00000376729|WDR13;nc|ENSG00000101940|Q9H1Z4-2|WDR13	104.01359247289065	0.03510646158778409	4				NaN	NaN	0	NaN	2999	2541	5535
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5562	18.235	NaN	40201	30	0	2741.3	0.214	+			32983	REEEKVSAV	9	93	523.7771751008621	1045.5397972685241	2	523.7776489257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_REEEKVSAV_	ENSG00000140262|ENST00000333725|TCF12;nc|ENSG00000140262|Q99081-2|TCF12;nc|ENSG00000140262|Q99081-4|TCF12;nc|ENSG00000140262|Q99081|TCF12	101.45984612302182	0.0377122763612125	4				NaN	NaN	0	NaN	3016	2544	5561
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5563	18.238	NaN	22443	30	0	16760	0.106				-1	 	0	44	362.89236202080383	1085.6552566626115	3	362.8924255371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3017	2544	5561
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5564	18.24	NaN	5594.4	30	0	1225.6	0.106	+			48797	VVAAGGVEK	9	56	415.2423534862657	828.4701540393314	2	415.2423400878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVAAGGVEK_	ENSG00000103485|ENST00000395384|QPRT	56.72105179125745	0.24094814563026265	4				NaN	NaN	0	NaN	3018	2544	5561
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5565	18.242	NaN	11831	30	0	1503.8	0.106	+			46720	VGMPDAKAIA	10	68	486.76448395298485	NaN	0	486.7643127441406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VGMPDAKAIA_	CHD7|p.D2988Mfs*3|5|0.36|ENSG00000171316|chr8:60865895-60865895|G/-|frameshift_variant;CHD7|p.G2228Lfs*52|1|0.03|ENSG00000171316|chr8:60853406-60853407|-/TTGCCTTC|frameshift_variant;CHD7|p.N2588Ifs*4|1|0.14|ENSG00000171316|chr8:60861054-60861054|A/-|frameshift_variant;ENSG00000171316|ENST00000423902|CHD7	67.49366992349736	0.17308373824428946	4				NaN	NaN	0	NaN	3019	2544	5561
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5566	18.244	NaN	9692.6	30	0	2656.2	0.106			+	1507	AGAAAMKGAQ	10	60	438.2236769418518	874.4328009505036	2	438.22357177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AGAAAMKGAQ_	REV__ENST00000545932.5_1_12:108956374-108956593:+|nuORF	71.29570347882199	0.26673431503403816	4				NaN	NaN	0	NaN	3020	2544	5561
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5567	18.246	NaN	1795.2	30	0	575.09	0.036			+	45890	VAPKVGNFIA	10	30	339.20129710335516	NaN	0	339.2012939453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VAPKVGNFIA_	REV__tr|U7SVQ0|U7SVQ0_FUSNUChromatetransporterOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01299PE=3SV=1	30.317721548370564	0.4006274431774794	4				NaN	NaN	0	NaN	3021	2544	5561
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5568	18.246	NaN	17091	30	0	2342.2	0.147				-1	 	0	79	481.6274674125378	1441.8605728378134	3	481.6275329589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3022	2544	5561
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5586	18.286	NaN	31864	30	0	8705	0.214	+			35787	SEAGSHTL	8	74	401.1904295692418	NaN	0	401.1903991699219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEAGSHTL_	ENSG00000204592|ENST00000376630|HLA-E;ENSG00000204642|ENST00000259951|HLA-F;ENSG00000234745|ENST00000412585|HLA-B;ENST00000474381.1_1_6:31323854-31324663:-|nuORF;HLA-B|p.G124Wfs*15|1|0.18|ENSG00000234745|chr6:31356416-31356417|-/A|frameshift_variant;HLA-B|p.H215Tfs*11|1|0.35|ENSG00000234745|chr6:31355569-31355569|G/-|frameshift_variant;HLA-B|p.P209Qfs*5|6|0.16|ENSG00000234745|chr6:31355586-31355586|G/-|frameshift_variant;HLA-B|p.V306Afs*13|1|0.49|ENSG00000234745|chr6:31355202-31355202|A/-|frameshift_variant;HLA-B|p.V312Cfs*22|1|0.28|ENSG00000234745|chr6:31355185-31355186|-/A|frameshift_variant;nc|ENSG00000204642|P30511-2|HLA-F;nc|ENSG00000204642|P30511|HLA-F	111.64827973302667	1.7418937515398478	4				NaN	NaN	0	NaN	3037	2547	5585
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5587	18.289	NaN	17434	30	0	2741.7	0.106				-1	 	0	92	603.9529083336187	1808.8368956010559	3	603.9539794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3038	2547	5585
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5588	18.291	NaN	11412	30	0	1333.6	0.106			+	31406	QKLASKFQK	9	66	539.3241138408719	1076.6336747485436	2	539.3248901367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QKLASKFQK_	REV__ENSG00000165533|ENST00000380656|TTC8;REV__nc|ENSG00000165533|Q8TAM2-3|TTC8;REV__nc|ENSG00000165533|Q8TAM2|TTC8	72.87924865735499	0.12833875048249987	4				NaN	NaN	0	NaN	3039	2547	5585
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5589	18.293	NaN	3647.7	30	0	968.66	0.106	+			22167	KSSDVFSSK	9	53	492.7531354934309	983.4917180536618	2	492.7530822753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KSSDVFSSK_	ENSG00000169435|ENST00000307439|RASSF6;nc|ENSG00000169435|Q6ZTQ3-3|RASSF6;nc|ENSG00000169435|Q6ZTQ3-4|RASSF6;nc|ENSG00000169435|Q6ZTQ3|RASSF6;RASSF6|p.K253Nfs*25|1|0.16|ENSG00000169435|chr4:73582195-73582195|T/-|frameshift_variant	144.76815839617436	0.008243131458242323	4				NaN	NaN	0	NaN	3040	2547	5585
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5590	18.295	NaN	2246.2	30	0	564.63	0.106			+	33280	RGLAPRAGE	9	48	463.7609425720066	NaN	0	463.7616271972656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RGLAPRAGE_	REV__ENST00000304076.6_1_19:6772726-6772816:+|nuORF	31.529811441608018	0.3183796599642538	4				NaN	NaN	0	NaN	3041	2547	5585
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5591	18.297	NaN	4183.7	30	0	2549.6	0.035			+	30294	PTKWLLTL	8	36	324.5343017578125	NaN	0	324.5343017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PTKWLLTL_	REV__ENSG00000041982|ENST00000350763|TNC;REV__nc|ENSG00000041982|P24821-2|TNC;REV__nc|ENSG00000041982|P24821-3|TNC;REV__nc|ENSG00000041982|P24821-4|TNC;REV__nc|ENSG00000041982|P24821-5|TNC;REV__nc|ENSG00000041982|P24821-6|TNC	30.503639358989545	1.7418937515398478	4				NaN	NaN	0	NaN	3042	2547	5585
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5592	18.297	NaN	1143	30	0	122.78	0.139			+	8893	EETKLDGF	8	46	469.7282409667969	NaN	0	469.7282409667969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EETKLDGF_	REV__CHD6|p.I2312Sfs*13|1|0.15|ENSG00000124177|chr20:41415191-41415191|T/-|frameshift_variant;REV__CHD7|p.D2988Mfs*3|5|0.36|ENSG00000171316|chr8:60865895-60865895|G/-|frameshift_variant;REV__CHD7|p.G2228Lfs*52|1|0.03|ENSG00000171316|chr8:60853406-60853407|-/TTGCCTTC|frameshift_variant;REV__CHD7|p.N2588Ifs*4|1|0.14|ENSG00000171316|chr8:60861054-60861054|A/-|frameshift_variant;REV__CHD8|p.D1870Rfs*3|1|0.3|ENSG00000100888|chr14:21394187-21394188|-/G|frameshift_variant;REV__CHD8|p.I1108Nfs*7|1|0.24|ENSG00000100888|chr14:21403648-21403649|-/T|frameshift_variant;REV__CHD8|p.L1905Ffs*30|2|0.29|ENSG00000100888|chr14:21394082-21394082|G/-|frameshift_variant;REV__CHD8|p.N2371Ifs*6|1|0.32|ENSG00000100888|chr14:21391017-21391017|T/-|frameshift_variant;REV__CHD8|p.N2371Kfs*2|2|0.24|ENSG00000100888|chr14:21391016-21391017|-/T|frameshift_variant;REV__CHD8|p.V1538*|1|0.4|ENSG00000100888|chr14:21400267-21400267|T/-|frameshift_variant;REV__CHD9|p.M2707Tfs*40|1|0.1|ENSG00000177200|chr16:53324320-53324321|-/C|frameshift_variant;REV__CHD9|p.N1798Tfs*17|1|0.12|ENSG00000177200|chr16:53292931-53292931|A/-|frameshift_variant;REV__CHD9|p.R2541Kfs*9|1|0.11|ENSG00000177200|chr16:53318242-53318243|-/A|frameshift_variant;REV__CHD9|p.R2632Dfs*28|1|0.35|ENSG00000177200|chr16:53324090-53324090|G/-|frameshift_variant;REV__ENSG00000100888|ENST00000646647|CHD8;REV__ENSG00000124177|ENST00000373233|CHD6;REV__ENSG00000171316|ENST00000423902|CHD7;REV__ENSG00000177200|ENST00000447540|CHD9;REV__ENST00000569225.5_1_16:53269177-53281416:+|nuORF;REV__nc|ENSG00000100888|Q9HCK8-2|CHD8;REV__nc|ENSG00000177200|Q3L8U1-2|CHD9;REV__nc|ENSG00000177200|Q3L8U1-3|CHD9	33.51558372728122	1.7418937515398478	4				NaN	NaN	0	NaN	3043	2547	5585
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5611	18.337	NaN	74954	30	0	16036	0.214	+			34289	RTLEPLAKK	9	111	352.5570798532115	1054.6494101598346	3	352.55718994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTLEPLAKK_	ENSG00000218739|ENST00000402297|CEBPZOS;ENST00000470216.1_1_2:37426847-37428252:+|nuORF	112.2953585152457	0.026655838328212944	4				NaN	NaN	0	NaN	3059	2550	5610
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5612	18.341	NaN	15772	30	0	4984.6	0.106	+			47253	VMRDPQTK	8	61	487.75801870406696	973.5014844749339	2	487.7578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VMRDPQTK_	ENSG00000170144|ENST00000392524|HNRNPA3;ENST00000437410.2_1_1:54441353-54441674:-|nuORF;ENST00000472163.1_1_3:75263799-75264780:+|nuORF;HNRNPA3|p.K200Rfs*147|1|0.13|ENSG00000170144|chr2:177216544-177216544|A/-|frameshift_variant;HNRNPA3|p.Y267Lfs*2|1|0.62|ENSG00000170144|chr2:177216918-177216919|-/T|frameshift_variant;nc|ENSG00000170144|P51991-2|HNRNPA3	104.0567914643314	0.248440647781298	4				NaN	NaN	0	NaN	3060	2550	5610
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5613	18.343	NaN	19382	30	0	5172.4	0.106			+	37043	SIRQSRQLK	9	77	372.56022725094186	1114.6588523530256	3	372.55731201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SIRQSRQLK_	REV__ENSG00000079841|ENST00000521978|RIMS1;REV__ENST00000524197.1_1_6:72926891-72975792:+|nuORF;REV__nc|ENSG00000079841|Q86UR5-10|RIMS1;REV__nc|ENSG00000079841|Q86UR5-12|RIMS1;REV__nc|ENSG00000079841|Q86UR5-13|RIMS1;REV__nc|ENSG00000079841|Q86UR5-2|RIMS1;REV__nc|ENSG00000079841|Q86UR5-3|RIMS1;REV__nc|ENSG00000079841|Q86UR5-4|RIMS1;REV__nc|ENSG00000079841|Q86UR5-5|RIMS1;REV__nc|ENSG00000079841|Q86UR5-6|RIMS1;REV__nc|ENSG00000079841|Q86UR5-7|RIMS1;REV__nc|ENSG00000079841|Q86UR5-8|RIMS1;REV__nc|ENSG00000079841|Q86UR5-9|RIMS1	38.80614096846853	0.43426287593479557	4				NaN	NaN	0	NaN	3061	2550	5610
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5614	18.345	NaN	4438.5	30	0	1566.5	0.106	+			39841	STLLIYEVS	9	46	342.1889204264493	1023.5449318795479	3	342.189208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STLLIYEVS_	nc|ENSG00000211623|A0A0A0MRZ7|IGKV2D-26	42.396135135203025	0.392153681582562	4				NaN	NaN	0	NaN	3062	2550	5610
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5615	18.346	NaN	1985.1	30	0	700.11	0.106	+			32135	QSLPSIAAIL	10	24	338.2053741698968	NaN	0	338.2054138183594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QSLPSIAAIL_	ENSG00000175294|ENST00000312106|CATSPER1;ENST00000529244.1_1_11:65786354-65788652:-|nuORF	19.262678746197807	0.4201028297492154	4				NaN	NaN	0	NaN	3063	2550	5610
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5616	18.348	NaN	5044.1	30	0	1523.3	0.037	+			22697	KVAIKVIDKK	10	58	381.26034445231477	1140.7592039571443	3	380.88995361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KVAIKVIDKK_	ENSG00000142149|ENST00000270112|HUNK;HUNK|p.K100Rfs*18|1|0.51|ENSG00000142149|chr21:31924501-31924501|A/-|frameshift_variant	41.080066990542036	0.5391928043837881	4				NaN	NaN	0	NaN	3064	2550	5610
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5617	18.349	NaN	2028.8	30	0	331.89	0.141	+			46933	VIYKNTHIK	9	59	558.331402477702	NaN	0	558.331298828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VIYKNTHIK_	ENSG00000138496|ENST00000682323|PARP9;nc|ENSG00000138496|Q8IXQ6-3|PARP9;nc|ENSG00000138496|Q8IXQ6|PARP9;PARP9|p.T633Pfs*5|2|0.22|ENSG00000138496|chr3:122537047-122537047|T/-|frameshift_variant	80.45461616416974	0.0698259577396595	4				NaN	NaN	0	NaN	3065	2550	5610
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5635	18.387	NaN	9771.7	30	0	2886.3	0.214	+			22698	KVAIKVIDKK	10	61	381.26034445231477	1140.7592039571443	3	381.26031494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVAIKVIDKK_	ENSG00000142149|ENST00000270112|HUNK;HUNK|p.K100Rfs*18|1|0.51|ENSG00000142149|chr21:31924501-31924501|A/-|frameshift_variant	72.2432373244024	0.2589930451692646	4				NaN	NaN	0	NaN	3080	2553	5634
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5636	18.391	NaN	4129.1	30	0	1041.4	0.106				-1	SKTCKQSK	8	67	483.75406704482884	965.4935811564577	2	483.7536315917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SKTC(Carbamidomethyl (C))KQSK_	ENST00000370282.7_1_1:93617980-93618103:-|nuORF	40.77816245573522	0.6514838689002179	4				NaN	NaN	0	NaN	3081	2553	5634
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5637	18.393	NaN	3120.7	30	0	1181	0.106	+			21091	KKPEDRPN	8	58	492.2673452034236	982.5201374736472	2	492.2669677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KKPEDRPN_	ENSG00000055332|ENST00000233057|EIF2AK2;nc|ENSG00000055332|P19525-2|EIF2AK2	38.80614096846853	0.6637206697844082	4				NaN	NaN	0	NaN	3082	2553	5634
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5638	18.394	NaN	3137.4	30	0	800.88	0.106	+			36637	SGILNSTNIQ	10	52	523.7771751008621	1045.5397972685241	2	524.7815551757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SGILNSTNIQ_	ENSG00000198901|ENST00000394249|PRC1;nc|ENSG00000198901|O43663-2|PRC1;nc|ENSG00000198901|O43663-4|PRC1	31.529811441608018	0.6223461015008678	4				NaN	NaN	0	NaN	3083	2553	5634
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5639	18.396	NaN	576.95	30	0	49.283	0.106	+			43830	TLSMVEIY	8	31	478.24554443359375	NaN	0	478.24554443359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TLSMVEIY_	ENSG00000167702|ENST00000645548|KIFC2;ENST00000531423.1_1_8:145696018-145698106:+|nuORF;nc|ENSG00000167702|Q96AC6|KIFC2	20.481830146152948	1.741893751539848	4				NaN	NaN	0	NaN	3084	2553	5634
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5640	18.398	NaN	1945.5	30	0	196.37	0.033	+			29366	PAFKWTGP	8	57	452.23968505859375	NaN	0	452.23968505859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PAFKWTGP_	E2F8|p.T831Ifs*21|1|0.05|ENSG00000129173|chr11:19224770-19224771|-/TTTAA|frameshift_variant;ENSG00000129173|ENST00000250024|E2F8	47.91560031466742	1.7418937515398478	4				NaN	NaN	0	NaN	3085	2553	5634
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5641	18.399	NaN	1700.3	30	0	176.25	0.14	+			19763	KEAEKSPQL	9	59	515.2820000046876	1028.549447076175	2	515.7835693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KEAEKSPQL_	ENSG00000116213|ENST00000270708|WRAP73;ENST00000469643.1_1_1:3549956-3551942:-|nuORF;ENST00000471223.1_1_1:3549956-3550340:-|nuORF;ENST00000497940.5_1_1:3549956-3553597:-|nuORF	80.45461616416974	0.09558281504443908	4				NaN	NaN	0	NaN	3086	2553	5634
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5659	18.436	NaN	5304.8	30	0	1365.6	0.214	+			46	AAAPAGRAM	9	56	408.2133490094909	814.4121450857818	2	408.2131652832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAAPAGRAM_	ENSG00000115525|ENST00000638572|ST3GAL5;ENST00000484728.6_2_2:86088279-86116028:-|nuORF	47.91560031466742	0.327412564698279	4				NaN	NaN	0	NaN	3101	2556	5658
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5660	18.44	NaN	2116.9	30	0	373.44	0.106			+	22755	KVEDKLKT	8	47	480.7899240645752	959.5652951959504	2	480.7899169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVEDKLKT_	REV__ENSG00000139746|ENST00000438737|RBM26;REV__nc|ENSG00000139746|Q5T8P6-2|RBM26;REV__nc|ENSG00000139746|Q5T8P6-3|RBM26;REV__nc|ENSG00000139746|Q5T8P6-4|RBM26;REV__nc|ENSG00000139746|Q5T8P6-5|RBM26	54.776311868738084	0.5534952410049249	4				NaN	NaN	0	NaN	3102	2556	5658
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5661	18.442	NaN	1730.1	30	0	273.43	0.106	+			21759	KQQGPILTK	9	53	506.81111156645727	1011.6076701997146	2	506.8111572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KQQGPILTK_	ENSG00000129351|ENST00000588657|ILF3;ENST00000587928.5_1_19:10792469-10795138:+|nuORF;nc|ENSG00000129351|Q12906-4|ILF3;nc|ENSG00000129351|Q12906-6|ILF3	133.9934435666947	0.013297982075521412	4				NaN	NaN	0	NaN	3103	2556	5658
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5662	18.444	NaN	6938.9	30	0	2555.4	0.106	+			4082	ATDKTFVEK	9	67	519.7767001690221	1037.538847404844	2	519.77734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATDKTFVEK_	ENSG00000133026|ENST00000360416|MYH10;nc|ENSG00000133026|P35580-2|MYH10;nc|ENSG00000133026|P35580-3|MYH10;nc|ENSG00000133026|P35580-5|MYH10;nc|ENSG00000133026|P35580|MYH10	131.61620852596164	0.014413238321579053	4				NaN	NaN	0	NaN	3104	2556	5658
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5663	18.445	NaN	2820.1	30	0	351.05	0.106	+			15702	GVNKAQDN	8	42	423.20846165877873	NaN	0	423.2084655761719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GVNKAQDN_	PIP|p.A25V|1|0.06|ENSG00000159763|chr7:143132190-143132190|C/T|missense_variant	30.503639358989545	1.7418937515398478	4				NaN	NaN	0	NaN	3105	2556	5658
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5664	18.447	NaN	1126.7	30	0	171.82	0.106			+	17245	HVVVPGVA	8	30	389.2338320359802	NaN	0	389.2337951660156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HVVVPGVA_	REV__ENSG00000106278|ENST00000393386|PTPRZ1;REV__nc|ENSG00000106278|P23471-2|PTPRZ1;REV__nc|ENSG00000106278|P23471-3|PTPRZ1	16.704963439144045	1.7418937515398478	4				NaN	NaN	0	NaN	3106	2556	5658
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5665	18.449	NaN	1591.4	30	0	197.55	0.035			+	43558	THTIEHTR	8	59	497.75689597993136	993.4992390266627	2	497.7566223144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_THTIEHTR_	REV__ZNF564|p.R469I|1|0.26|ENSG00000249709|chr19:12526702-12526702|C/A|missense_variant	31.954861631926434	0.7126016770032289	4				NaN	NaN	0	NaN	3107	2556	5658
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5683	18.487	NaN	19077	30	0	3520.7	0.214	+			41067	SVIKNVSTK	9	77	488.29509031390785	974.5756276946157	2	488.2950744628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVIKNVSTK_	ENSG00000122257|ENST00000319715|RBBP6;nc|ENSG00000122257|Q7Z6E9-2|RBBP6;nc|ENSG00000122257|Q7Z6E9-4|RBBP6;RBBP6|p.D1432Vfs*9|1|0.04|ENSG00000122257|chr16:24571360-24571361|-/TTTTCCCTTTTTC|frameshift_variant;RBBP6|p.T1475Lfs*20|1|0.3|ENSG00000122257|chr16:24571483-24571483|A/-|frameshift_variant	140.11223852658463	0.010427410095706195	4				NaN	NaN	0	NaN	3122	2559	5682
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5684	18.49	NaN	6484.6	30	0	2506	0.106	+			48969	VVGDGAVGK	9	44	401.22687649075436	800.4392000483087	2	401.22686767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVGDGAVGK_	ENSG00000070831|ENST00000656825|CDC42;ENSG00000119729|ENST00000238738|RHOQ;ENSG00000126785|ENST00000316754|RHOJ;ENSG00000128340|ENST00000249071|RAC2;ENSG00000136238|ENST00000348035|RAC1;ENSG00000169750|ENST00000306897|RAC3;ENSG00000177105|ENST00000351018|RHOG;ENST00000469532.1_1_22:37628528-37640188:-|nuORF;nc|ENSG00000126785|Q9H4E5-2|RHOJ;nc|ENSG00000136238|P63000-2|RAC1;nc|ENSG00000289694|P60953-1|CDC42;RAC1|p.S83Pfs*3|1|0.19|ENSG00000136238|chr7:6400144-6400144|T/-|frameshift_variant;RHOQ|p.F175Lfs*6|1|0.05|ENSG00000119729|chr2:46580986-46580986|T/-|frameshift_variant;RHOQ|p.R193Efs*2|1|0.25|ENSG00000119729|chr2:46581035-46581035|A/-|frameshift_variant	66.42927471994793	0.16001998865088202	4				NaN	NaN	0	NaN	3123	2559	5682
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5685	18.492	NaN	11082	30	0	2833.1	0.106	+			34532	RVIAKALEK	9	72	514.3347075566319	NaN	0	514.3348388671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RVIAKALEK_	ENSG00000100401|ENST00000356244|RANGAP1	83.6470233535746	0.058886874190800687	4				NaN	NaN	0	NaN	3124	2559	5682
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5686	18.494	NaN	3287.4	30	0	613.79	0.106	+			21352	KMAACQLLL	9	58	495.77679819051866	989.5390434478373	2	495.7767333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KMAACQLLL_	ENSG00000144406|ENST00000673920|UNC80;ENST00000489023.5_1_2:210693994-210832362:+|nuORF;nc|ENSG00000144406|Q8N2C7-2|UNC80;nc|ENSG00000144406|Q8N2C7-4|UNC80;nc|ENSG00000144406|Q8N2C7-7|UNC80;nc|ENSG00000144406|Q8N2C7|UNC80;UNC80|p.C1944Afs*12|1|0.28|ENSG00000144406|chr2:209933850-209933850|C/-|frameshift_variant;UNC80|p.N2032*|1|0.42|ENSG00000144406|chr2:209936855-209936856|-/T|frameshift_variant;UNC80|p.P2700Hfs*13|1|0.23|ENSG00000144406|chr2:209972238-209972238|C/-|frameshift_variant	63.30626980617807	0.18605348971131092	4				NaN	NaN	0	NaN	3125	2559	5682
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5687	18.496	NaN	5085.1	30	0	2364.2	0.106			+	30295	PTLASMRLQG	10	38	358.5302823232442	1072.5690175699326	3	358.5306701660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PTLASMRLQG_	REV__ENST00000514213.6_3_4:76734909-76735050:+|nuORF	33.921630207806714	0.6028135429846169	4				NaN	NaN	0	NaN	3126	2559	5682
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5688	18.498	NaN	2191.5	30	0	295.83	0.035	+			22294	KTDSDIISK	9	64	503.77436879671865	NaN	0	503.77447509765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KTDSDIISK_	ENSG00000125870|ENST00000246071|SNRPB2	91.26522074875469	0.03904588892501484	4				NaN	NaN	0	NaN	3127	2559	5682
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5689	18.498	NaN	4121.8	30	0	376.71	0.144	+			34531	RVIAKALEK	9	58	343.22540264890233	1026.654378546907	3	343.2255554199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RVIAKALEK_	ENSG00000100401|ENST00000356244|RANGAP1	63.53385203322761	0.18415635464017938	4				NaN	NaN	0	NaN	3128	2559	5682
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5707	18.538	NaN	9232.2	30	0	2758.2	0.214	+			35622	SCCPVGCSK	9	56	470.6872656801967	939.3599784271934	2	470.6874084472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SCC(Carbamidomethyl (C))PVGCSK_	ENSG00000198417|ENST00000334350|MT1F;ENST00000564295.1_1_16:56692857-56693073:+|nuORF	106.68306549817024	0.032382560583716295	4				NaN	NaN	0	NaN	3143	2562	5706
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5708	18.541	NaN	2668.6	30	0	390.02	0.106	+			27134	MASRTSSEM	9	59	500.21527905080427	NaN	0	500.21514892578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MASRTSSEM_	ENSG00000265972|ENST00000582401|TXNIP;ENST00000488537.1_1_1:145440673-145441098:+|nuORF;nc|ENSG00000265972|Q9H3M7-2|TXNIP	80.45461616416974	0.0698259577396595	4				NaN	NaN	0	NaN	3144	2562	5706
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5709	18.543	NaN	4237.6	30	0	1009.7	0.106	+			48334	VTGGATGIGK	10	53	430.7454291319209	859.4763053306418	2	430.74530029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTGGATGIGK_	ENSG00000115425|ENST00000265322|PECR;ENST00000474093.5_1_2:216929948-216946521:-|nuORF;ENST00000487318.6_1_2:216928831-216946521:-|nuORF;ENST00000497889.5_1_2:216915539-216946464:-|nuORF	61.691277971877994	0.35045824941635534	4				NaN	NaN	0	NaN	3145	2562	5706
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5710	18.545	NaN	3411.7	30	0	385.86	0.106	+			36923	SIKINQKN	8	70	472.77913421604865	NaN	0	472.7791748046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SIKINQKN_	tr|U7ST57|U7ST57_FUSNUCoenzymeAbiosynthesisbifunctionalproteinCoaBCOS=FusobacteriumnucleatumCTI-5OX=1316586GN=coaBCPE=3SV=1	42.396135135203025	1.7418937515398478	4				NaN	NaN	0	NaN	3146	2562	5706
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5711	18.547	NaN	1242.2	30	0	148.5	0.106				-1	HAIMRSPQM	9	51	543.7618924522692	1085.5092319713383	2	543.7627563476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_HAIMRSPQM(Oxidation (M))_	CTNNB1|p.L301Hfs*16|1|0.05|ENSG00000168036|chr3:41225827-41225831|TTCAA/-|frameshift_variant;CTNNB1|p.M271Wfs*5|1|0.08|ENSG00000168036|chr3:41225733-41225733|A/-|frameshift_variant;ENSG00000168036|ENST00000349496|CTNNB1	45.97224482568171	0.3502073465782774	4				NaN	NaN	0	NaN	3147	2562	5706
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5712	18.549	NaN	2189.5	30	0	437.12	0.106				-1	LAMALHVP	8	57	447.25049482146966	892.4864367097393	2	447.24993896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LAMALHVP_	ENST00000470450.5_1_21:30445830-30445917:-|nuORF;ENST00000484403.5_1_21:30439206-30445917:-|nuORF;ENST00000540844.5_1_21:30439913-30445917:-|nuORF	24.504012794735996	0.7701314986472447	4				NaN	NaN	0	NaN	3148	2562	5706
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5713	18.55	NaN	745.36	30	0	66.544	0.035	+			23372	LAAAPAPLGPQ	11	44	503.28936767578125	NaN	0	503.28936767578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LAAAPAPLGPQ_	ENST00000354309.4_1_19:57752145-57759996:+|nuORF	27.882242232435846	0.44115667141176046	4				NaN	NaN	0	NaN	3149	2562	5706
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5731	18.588	NaN	155690	30	0	17075	0.215	+			34385	RTSEIYVHR	9	128	387.5437091636736	1159.6092980912208	3	387.54376220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTSEIYVHR_	ENSG00000089737|ENST00000621632|DDX24;ENST00000555762.1_1_14:94517539-94521656:-|nuORF;nc|ENSG00000089737|Q9GZR7-2|DDX24	112.2953585152457	0.026655838328212944	4				NaN	NaN	0	NaN	3164	2565	5730
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5732	18.592	NaN	4084.6	30	0	857.5	0.106	+			6016	AVMDSDTTGK	10	65	512.7341762277658	1023.4537995223317	2	512.734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVMDSDTTGK_	ENSG00000126247|ENST00000246533|CAPNS1	56.43379154798735	0.3982744522255666	4				NaN	NaN	0	NaN	3165	2565	5730
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5733	18.594	NaN	2401.9	30	0	265.77	0.106	+			3	AAAAALQAK	9	57	407.74254582537174	813.4705387175435	2	407.74267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AAAAALQAK_	ENSG00000174444|ENST00000307961|RPL4;ENST00000567229.5_1_15:66791747-66793486:-|nuORF	90.77665401227738	0.06267569666681755	4				NaN	NaN	0	NaN	3166	2565	5730
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5734	18.596	NaN	1986.5	30	0	178.9	0.106	+			20072	KEKGAIRL	8	52	457.7924516043861	913.5703502755722	2	457.7923278808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEKGAIRL_	ENSG00000099901|ENST00000430524|RANBP1;ENST00000435265.5_1_22:20106640-20110140:+|nuORF;ENST00000488484.1_1_22:20105172-20110015:+|nuORF;nc|ENSG00000099901|P43487-2|RANBP1;nc|ENSG00000099901|P43487|RANBP1	40.77816245573522	0.6514838689002179	4				NaN	NaN	0	NaN	3167	2565	5730
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5735	18.597	NaN	12343	30	0	1616	0.106	+			33162	RETLQQHKL	9	76	384.8873294500907	1151.6401589504721	3	384.88763427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RETLQQHKL_	ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF;ENST00000551983.1_1_12:104335630-104337190:+|nuORF	99.01295224348159	0.040209060045561164	4				NaN	NaN	0	NaN	3168	2565	5730
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5736	18.599	NaN	1516.8	30	0	372.77	0.036	+			36716	SGTHWRVLG	9	24	338.18207384082143	NaN	0	338.1820068359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SGTHWRVLG_	ENSG00000198851|ENST00000361763|CD3E;ENST00000528435.5_1_11:118175667-118182938:+|nuORF;ENST00000529713.5_1_11:118175667-118183649:+|nuORF	19.359975847455235	0.3714571876404798	4				NaN	NaN	0	NaN	3169	2565	5730
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5737	18.6	NaN	364.64	30	0	93.536	0.141			+	19226	KAAKAEEGSFA	11	25	554.7870483398438	NaN	0	554.7870483398438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KAAKAEEGSFA_	REV__ENSG00000127663|ENST00000159111|KDM4B;REV__ENST00000589104.5_1_19:5070919-5151519:+|nuORF;REV__nc|ENSG00000127663|O94953|KDM4B	23.52269567125451	0.456735970842152	4				NaN	NaN	0	NaN	3170	2565	5730
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5755	18.637	NaN	10559	30	0	1794.6	0.214	+			19797	KEASTTVRV	9	70	495.78224420879565	989.5499354843913	2	495.7820739746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEASTTVRV_	ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;nc|ENSG00000185164|Q5JPE7-3|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2;NOMO1|p.P1102Hfs*42|1|0.36|ENSG00000103512|chr16:14886838-14886838|C/-|frameshift_variant	117.81106730687013	0.02252488733980868	4				NaN	NaN	0	NaN	3185	2568	5754
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5756	18.641	NaN	4791.5	30	0	627.12	0.106	+			49598	VYGKTSHL	8	64	452.74786376953125	NaN	0	452.74786376953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYGKTSHL_	ENSG00000105866|ENST00000222584|SP4;ENSG00000164651|ENST00000418710|SP8;ENSG00000172845|ENST00000310015|SP3;ENSG00000185591|ENST00000327443|SP1;ENSG00000204335|ENST00000375281|SP5;ENSG00000217236|ENST00000394967|SP9;ENST00000465379.1_1_2:174774671-174778005:-|nuORF;nc|ENSG00000164651|Q8IXZ3-1|SP8;nc|ENSG00000164651|Q8IXZ3-2|SP8;nc|ENSG00000164651|Q8IXZ3|SP8;nc|ENSG00000172845|Q02447-2|SP3;nc|ENSG00000172845|Q02447-3|SP3;nc|ENSG00000172845|Q02447-4|SP3;nc|ENSG00000172845|Q02447-5|SP3;nc|ENSG00000172845|Q02447-6|SP3;nc|ENSG00000185591|P08047-2|SP1;nc|ENSG00000185591|P08047-3|SP1;SP3|p.G708Vfs*20|1|0.27|ENSG00000172845|chr2:173910166-173910166|T/-|frameshift_variant;SP8|p.E482Sfs*8|1|0.36|ENSG00000164651|chr7:20784320-20784320|G/-|frameshift_variant	63.30626980617807	1.7418937515398478	4				NaN	NaN	0	NaN	3186	2568	5754
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5757	18.643	NaN	17665	30	0	1492.9	0.106				-1	 	0	76	599.7753576932853	1197.5361624533705	2	599.7762451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3187	2568	5754
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5758	18.645	NaN	4362.9	30	0	616.88	0.106	+			37472	SLKIEERA	8	56	473.2720433708448	NaN	0	473.2720642089844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLKIEERA_	CALD1|p.S660Afs*12|1|0.15|ENSG00000122786|chr7:134958108-134958108|A/-|frameshift_variant;ENSG00000122786|ENST00000361675|CALD1;ENST00000482470.5_1_7:134552484-134644871:+|nuORF;nc|ENSG00000122786|Q05682-2|CALD1;nc|ENSG00000122786|Q05682-3|CALD1;nc|ENSG00000122786|Q05682-4|CALD1;nc|ENSG00000122786|Q05682-5|CALD1;nc|ENSG00000122786|Q05682-6|CALD1	69.6276240434122	1.7418937515398478	4				NaN	NaN	0	NaN	3188	2568	5754
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5759	18.646	NaN	5837.3	30	0	909.01	0.106	+			15921	HADASSKVL	9	58	464.2481096449527	926.4816663567054	2	464.2481689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HADASSKVL_	ENSG00000166169|ENST00000370162|POLL;ENST00000339310.7_1_10:103343400-103347291:-|nuORF	101.25262130126117	0.03792372629710479	4				NaN	NaN	0	NaN	3189	2568	5754
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5760	18.648	NaN	1785.4	30	0	287.84	0.035				-1	MVELVISPS	9	50	508.7722990634015	NaN	0	508.7722473144531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))MVELVISPS_	ENSG00000064655|ENST00000327619|EYA2;nc|ENSG00000064655|O00167-2|EYA2;nc|ENSG00000064655|O00167-3|EYA2	37.15910966729921	0.2899585034171616	4				NaN	NaN	0	NaN	3190	2568	5754
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5761	18.649	NaN	2195.6	30	0	926.64	0.139	+			3126	ASGVQRAP	8	35	393.21679055082257	784.4190281684452	2	393.21673583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASGVQRAP_	ENST00000404338.7_1_19:47505195-47505501:+|nuORF	17.364965105453717	0.7956685240855921	4				NaN	NaN	0	NaN	3191	2568	5754
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5779	18.687	NaN	61973	30	0	22272	0.214	+			14479	GTCGKSLISK	10	89	525.7849179906477	1049.5552830480954	2	525.78466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GTC(Carbamidomethyl (C))GKSLISK_	ENSG00000118322|ENST00000327245|ATP10B	162.63603312974413	0.006026810256601855	4				NaN	NaN	0	NaN	3206	2571	5778
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5780	18.691	NaN	5604.9	30	0	1439.8	0.106				-1	 	0	66	454.2582798343778	453.2510033677778	1	454.2582092285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3207	2571	5778
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5781	18.693	NaN	2207.5	30	0	464.21	0.106	+			3102	ASGGYIGGK	9	44	405.21118332996775	808.4078137267355	2	405.211181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASGGYIGGK_	ENSG00000100596|ENST00000216484|SPTLC2	62.107414245175825	0.1960472003779324	4				NaN	NaN	0	NaN	3208	2571	5778
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5782	18.695	NaN	4231.9	30	0	867.05	0.106	+			35185	SAINDKSIVKK	11	63	401.5748596191406	NaN	0	401.5748596191406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SAINDKSIVKK_	ENSG00000131351|ENST00000253669|HAUS8;nc|ENSG00000131351|Q9BT25-2|HAUS8;nc|ENSG00000131351|Q9BT25-3|HAUS8	48.18798116849167	0.3283333270526623	4				NaN	NaN	0	NaN	3209	2571	5778
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5783	18.696	NaN	4538.2	30	0	508.79	0.106	+			982	AEKEMHNL	8	68	486.2341856882494	970.4538184432988	2	486.2342529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEKEMHNL_	ENSG00000101782|ENST00000339486|RIOK3;ENST00000581302.5_1_18:21033283-21057068:+|nuORF;nc|ENSG00000101782|O14730-2|RIOK3;RIOK3|p.L482*|1|0.4|ENSG00000101782|chr18:23479412-23479412|T/-|frameshift_variant	98.58198989935565	0.2514901435568318	4				NaN	NaN	0	NaN	3210	2571	5778
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5784	18.698	NaN	4824.1	30	0	745.25	0.036			+	32712	RAKVEPSLR	9	69	528.3196187004423	1054.6246844676846	2	528.3201293945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RAKVEPSLR_	REV__ENSG00000103197|ENST00000219476|TSC2;REV__ENST00000497886.5_1_16:2128976-2136835:+|nuORF;REV__ENST00000569930.1_1_16:2133412-2138608:+|nuORF;REV__nc|ENSG00000103197|P49815-2|TSC2;REV__nc|ENSG00000103197|P49815-3|TSC2;REV__nc|ENSG00000103197|P49815-4|TSC2;REV__nc|ENSG00000103197|P49815-5|TSC2;REV__nc|ENSG00000103197|P49815-6|TSC2;REV__nc|ENSG00000103197|P49815-7|TSC2;REV__TSC2|p.S1427Vfs*49|1|0.21|ENSG00000103197|chr16:2084499-2084499|A/-|frameshift_variant	48.601550744091256	0.3193666407755445	4				NaN	NaN	0	NaN	3211	2571	5778
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5785	18.699	NaN	4140.6	30	0	1452.5	0.145			+	-1	LSSDVKPTMNK	11	41	412.548185032946	1234.622725699038	3	412.54840087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_LSSDVKPTM(Oxidation (M))NK_	REV__DST|p.K5076Nfs*24|1|0.31|ENSG00000151914|chr6:56472218-56472218|T/-|frameshift_variant;REV__DST|p.T4428Nfs*23|1|0.12|ENSG00000151914|chr6:56497896-56497897|-/T|frameshift_variant;REV__ENSG00000151914|ENST00000680361|DST;REV__nc|ENSG00000151914|Q03001-9|DST;REV__nc|ENSG00000151914|Q03001|DST	29.550750289552195	0.6798279264880025	4				NaN	NaN	0	NaN	3212	2571	5778
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5803	18.738	NaN	18504	30	0	3146.5	0.214			+	44934	TVANLHVVQ	9	65	490.779512094368	979.544471255536	2	490.7792663574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVANLHVVQ_	REV__ENSG00000165724|ENST00000298585|ZMYND19	84.9155231211612	0.07920012719736333	4				NaN	NaN	0	NaN	3227	2574	5802
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5804	18.742	NaN	6245.5	30	0	1171.2	0.106	+			487	AAYEGSVAK	9	62	448.2295000190745	894.4444471049491	2	448.2293395996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAYEGSVAK_	CDAN1|p.T563Pfs*29|1|0.16|ENSG00000140326|chr15:42731673-42731673|G/-|frameshift_variant;ENSG00000140326|ENST00000356231|CDAN1;nc|ENSG00000140326|Q8IWY9-1|CDAN1	95.81516180277367	0.04847050768394289	4				NaN	NaN	0	NaN	3228	2574	5802
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5805	18.744	NaN	63927	30	0	12151	0.106	+			39443	STEKIYIRK	9	99	379.8922276009955	1136.6548534031865	3	379.89227294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STEKIYIRK_	ENSG00000120798|ENST00000333003|NR2C1;ENSG00000177463|ENST00000425241|NR2C2;ENST00000475707.5_1_3:15045421-15079667:+|nuORF;nc|ENSG00000120798|P13056-2|NR2C1;nc|ENSG00000120798|P13056-3|NR2C1;nc|ENSG00000177463|P49116-2|NR2C2;NR2C2|p.F563Lfs*10|1|0.4|ENSG00000177463|chr3:15042899-15042899|T/-|frameshift_variant	90.60085204095205	0.06317133949006545	4				NaN	NaN	0	NaN	3229	2574	5802
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5806	18.746	NaN	14372	30	0	1835.5	0.106	+			15964	HAHVDKVTY	9	71	535.2745958469953	1068.5346387607906	2	535.2750854492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HAHVDKVTY_	ENSG00000181396|ENST00000313056|OGFOD3;nc|ENSG00000181396|Q6PK18-2|OGFOD3	129.42129120953632	0.01549634589885217	4				NaN	NaN	0	NaN	3230	2574	5802
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5807	18.748	NaN	8197.4	30	0	719.78	0.106	+			12246	GASSVEQL	8	73	395.7006333433099	789.3867137534198	2	395.70050048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GASSVEQL_	ENSG00000140553|ENST00000418476|UNC45A;ENST00000486253.1_1_15:91478554-91479244:+|nuORF;ENST00000557212.5_1_15:91478554-91479518:+|nuORF	53.351449002276354	0.5676011784961348	4				NaN	NaN	0	NaN	3231	2574	5802
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5808	18.749	NaN	2386.1	30	0	266.25	0.033	+			19495	KATKLIPN	8	53	442.7815772727786	883.5486016123572	2	442.7632141113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KATKLIPN_	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42|TTN;TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;TTN|p.D20259Rfs*40|1|0.44|ENSG00000155657|chr2:178583105-178583106|-/T|frameshift_variant;TTN|p.D21555Ifs*6|1|0.33|ENSG00000155657|chr2:178576659-178576659|G/-|frameshift_variant;TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;TTN|p.E15132Sfs*22|1|0.27|ENSG00000155657|chr2:178612094-178612094|C/-|frameshift_variant;TTN|p.E20392Dfs*6|1|0.04|ENSG00000155657|chr2:178582357-178582358|-/TTTAAAATTA|frameshift_variant;TTN|p.E20392Kfs*4|1|0.02|ENSG00000155657|chr2:178582359-178582360|-/TTTT|frameshift_variant;TTN|p.F18705Lfs*8|1|0.37|ENSG00000155657|chr2:178590687-178590687|A/-|frameshift_variant;TTN|p.G19920Afs*12|1|0.42|ENSG00000155657|chr2:178584961-178584961|G/-|frameshift_variant;TTN|p.G22029Efs*22|2|0.13|ENSG00000155657|chr2:178575125-178575125|T/-|frameshift_variant;TTN|p.I24998Nfs*2|1|0.35|ENSG00000155657|chr2:178566216-178566217|-/T|frameshift_variant;TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;TTN|p.K26626Nfs*34|1|0.34|ENSG00000155657|chr2:178561331-178561331|T/-|frameshift_variant;TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant;TTN|p.N15496Ifs*16|1|0.09|ENSG00000155657|chr2:178610116-178610116|T/-|frameshift_variant;TTN|p.P16126Rfs*3|1|0.25|ENSG00000155657|chr2:178607301-178607302|TG/-|frameshift_variant;TTN|p.P22810Hfs*10|1|0.03|ENSG00000155657|chr2:178572780-178572781|-/AAAT|frameshift_variant;TTN|p.V22573Cfs*4|2|0.31|ENSG00000155657|chr2:178573492-178573492|C/-|frameshift_variant;TTN|p.V27442Cfs*4|1|0.05|ENSG00000155657|chr2:178558107-178558108|-/A|frameshift_variant	44.116797842482775	0.6307669463330267	4				NaN	NaN	0	NaN	3232	2574	5802
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5809	18.75	NaN	583.88	30	0	79.17	0.14			+	28946	NRVLATSKE	9	36	509.28729248046875	NaN	0	509.28729248046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NRVLATSKE_	REV__ENST00000490356.2_1_11:132177611-132182375:+|nuORF	17.468008924990375	0.37786057458515737	4				NaN	NaN	0	NaN	3233	2574	5802
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5829	18.786	NaN	145730	30	0	40821	0.214				-1	 	0	89	478.2397462572508	954.4649395813016	2	478.23980712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3250	2577	5828
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5830	18.789	NaN	3098.7	30	0	466.71	0.106	+			12712	GEKSVHEGAL	10	61	513.7640627037356	1025.513572474271	2	513.7643432617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEKSVHEGAL_	ENSG00000079819|ENST00000337057|EPB41L2	74.1650062923329	0.2432923583094885	4				NaN	NaN	0	NaN	3251	2577	5828
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5831	18.791	NaN	9511.6	30	0	3319.9	0.106	+			35801	SEAKPAAVAA	10	62	457.7504440272669	913.4863351213338	2	457.7503662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEAKPAAVAA_	ENSG00000137076|ENST00000314888|TLN1;ENST00000486788.2_1_9:35704327-35706084:-|nuORF;nc|ENSG00000137076|Q9Y490-2|TLN1	67.49366992349736	0.29779660154124327	4				NaN	NaN	0	NaN	3252	2577	5828
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5832	18.793	NaN	6788.2	30	0	1232.1	0.106	+			41743	SVSKDVVVSK	10	66	524.3056341919615	1046.596715450723	2	524.3062133789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVSKDVVVSK_	E4F1|p.E388Gfs*55|1|0.48|ENSG00000167967|chr16:2233539-2233540|-/G|frameshift_variant;E4F1|p.E717Rfs*3|1|0.25|ENSG00000167967|chr16:2235361-2235361|C/-|frameshift_variant;ENSG00000167967|ENST00000301727|E4F1;ENST00000569796.1_1_16:2282158-2283271:+|nuORF	110.54063921016906	0.04639402190081153	4				NaN	NaN	0	NaN	3253	2577	5828
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5833	18.795	NaN	3973.8	30	0	642.66	0.106			+	35487	SATLKPWQN	9	50	348.85367997650525	1043.5392105297158	3	348.8537902832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SATLKPWQN_	REV__ENST00000312753.9_2_1:145510914-145515950:-|nuORF;REV__ENST00000604273.1_2_1:145515521-145515950:-|nuORF	44.116797842482775	0.37197099687881774	4				NaN	NaN	0	NaN	3254	2577	5828
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5834	18.797	NaN	3536	30	0	944.54	0.106	+			30200	PSPPVNGG	8	40	362.68462292892235	723.3546929246447	2	362.6846923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PSPPVNGG_	ENSG00000100354|ENST00000454349|TNRC6B;nc|ENSG00000100354|Q9UPQ9-1|TNRC6B;nc|ENSG00000100354|Q9UPQ9-2|TNRC6B;TNRC6B|p.A1354Tfs*46|1|0.47|ENSG00000100354|chr22:40301265-40301266|-/ACCCAAC|frameshift_variant;TNRC6B|p.E751Rfs*41|1|0.08|ENSG00000100354|chr22:40266476-40266476|G/-|frameshift_variant;TNRC6B|p.E999Rfs*48|1|0.29|ENSG00000100354|chr22:40273449-40273449|G/-|frameshift_variant;TNRC6B|p.G1342Wfs*56|1|0.32|ENSG00000100354|chr22:40301234-40301235|-/T|frameshift_variant;TNRC6B|p.L546Sfs*63|1|0.35|ENSG00000100354|chr22:40265862-40265862|C/-|frameshift_variant;TNRC6B|p.N758Tfs*34|1|0.18|ENSG00000100354|chr22:40266498-40266498|A/-|frameshift_variant;TNRC6B|p.P111Lfs*29|1|0.35|ENSG00000100354|chr22:40262044-40262044|C/-|frameshift_variant;TNRC6B|p.Y593Tfs*16|1|0.8|ENSG00000100354|chr22:40266006-40266006|G/-|frameshift_variant	20.481830146152948	0.8005983782650069	4				NaN	NaN	0	NaN	3255	2577	5828
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5835	18.799	NaN	1755.8	30	0	243.38	0.034	+			10365	ETWSLTPK	8	46	481.25135108063154	960.4881492280631	2	481.250732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ETWSLTPK_	tr|U7SLV8|U7SLV8_FUSNUAutotransporterdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01907PE=4SV=1	34.172542307311794	0.6954784234644539	4				NaN	NaN	0	NaN	3256	2577	5828
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5840	18.812	NaN	13077	30	0	3002.9	0.214	+			3728	ATAAVSSMK	9	65	433.22576465724575	864.4369763812915	2	433.225830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATAAVSSMK_	ADD3-MXI1|1|fusion;ENSG00000148700|ENST00000356080|ADD3;nc|ENSG00000148700|Q9UEY8-2|ADD3	138.06239232086	0.011389075116295402	4				NaN	NaN	0	NaN	3258	2580	5839
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5841	18.816	NaN	4040.4	30	0	1967.8	0.106	+			17958	IGSLRNMM	8	61	469.23455030851994	936.4545476838399	2	469.2342834472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_IGSLRNM(Oxidation (M))M_	ATM|p.C1838Vfs*8|1|0.42|ENSG00000149311|chr11:108304687-108304687|T/-|frameshift_variant;ATM|p.G1642Wfs*23|1|0.78|ENSG00000149311|chr11:108297299-108297300|-/T|frameshift_variant;ATM|p.G2425Vfs*15|1|0.33|ENSG00000149311|chr11:108329204-108329204|G/-|frameshift_variant;ATM|p.I1581Sfs*20|1|0.25|ENSG00000149311|chr11:108293437-108293437|A/-|frameshift_variant;ATM|p.K1170Nfs*11|1|0.26|ENSG00000149311|chr11:108281098-108281098|A/-|frameshift_variant;ATM|p.K2303Rfs*7|2|0.24|ENSG00000149311|chr11:108326153-108326153|A/-|frameshift_variant;ATM|p.K2413Tfs*11|1|0.06|ENSG00000149311|chr11:108329168-108329169|-/CAACCAATTTAAATTAT|frameshift_variant;ATM|p.K2811Sfs*46|1|0.34|ENSG00000149311|chr11:108345750-108345750|A/-|frameshift_variant;ATM|p.L2231Wfs*4|1|0.52|ENSG00000149311|chr11:108325426-108325426|T/-|frameshift_variant;ATM|p.P1587Ffs*13|1|0.08|ENSG00000149311|chr11:108293459-108293462|ACCC/-|frameshift_variant;ATM|p.R1973Efs*17|1|0.26|ENSG00000149311|chr11:108310311-108310311|A/-|frameshift_variant;ATM|p.T1609*|1|0.23|ENSG00000149311|chr11:108294972-108294973|-/TG|frameshift_variant;ATM|p.V1446Cfs*2|1|0.25|ENSG00000149311|chr11:108289697-108289698|-/T|frameshift_variant;ATM|p.W1026Lfs*22|1|0.36|ENSG00000149311|chr11:108271401-108271402|-/T|frameshift_variant;ENSG00000149311|ENST00000675843|ATM	44.53106598305862	0.628196326904373	4				NaN	NaN	0	NaN	3259	2580	5839
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5842	18.818	NaN	4737.1	30	0	2102.5	0.106	+			31183	QGNESIVAK	9	53	473.2533184520981	944.4920839709962	2	473.2530212402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QGNESIVAK_	ENSG00000161800|ENST00000312377|RACGAP1;ENST00000548158.1_1_12:50393384-50398020:-|nuORF	45.97224482568171	0.3502073465782774	4				NaN	NaN	0	NaN	3260	2580	5839
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5843	18.819	NaN	2632.2	30	0	296.71	0.106	+			29584	PFLPLTWP	8	60	485.77446667453955	969.5343804158791	2	486.2725830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PFLPLTWP_	nc|nan|Q96N68|C18orf15	30.503639358989545	0.7238069182250283	4				NaN	NaN	0	NaN	3261	2580	5839
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5844	18.821	NaN	2198	30	0	466.91	0.106	+			29927	PLTVAQKK	8	54	442.7815772727786	883.5486016123572	2	442.78167724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PLTVAQKK_	ENSG00000171824|ENST00000376936|EXOSC10;ENST00000474216.5_1_1:11126777-11137033:-|nuORF;nc|ENSG00000171824|Q01780-2|EXOSC10	45.9519527083369	0.6193794311207887	4				NaN	NaN	0	NaN	3262	2580	5839
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5845	18.823	NaN	2375.7	30	0	467.62	0.106			+	43502	TGSAERPK	8	49	423.22709697289844	844.4396410125969	2	423.2270812988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TGSAERPK_	REV__CHD6|p.I2312Sfs*13|1|0.15|ENSG00000124177|chr20:41415191-41415191|T/-|frameshift_variant;REV__CHD6|p.N481Tfs*10|1|0.23|ENSG00000124177|chr20:41490016-41490016|T/-|frameshift_variant;REV__ENSG00000124177|ENST00000373233|CHD6;REV__nc|ENSG00000124177|Q8TD26-2|CHD6;REV__nc|ENSG00000124177|Q8TD26-3|CHD6	37.15910966729921	0.6739408393984688	4				NaN	NaN	0	NaN	3263	2580	5839
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5846	18.825	NaN	1526.8	30	0	426.69	0.033			+	21064	KKLFSAGV	8	51	425.2630920410156	NaN	0	425.2630920410156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KKLFSAGV_	REV__ENSG00000196208|ENST00000381486|GREB1;REV__nc|ENSG00000196208|Q4ZG55-4|GREB1	38.80614096846853	1.7418937515398478	4				NaN	NaN	0	NaN	3264	2580	5839
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5864	18.86	NaN	29612	30	0	11895	0.214	+			4731	ATMKTELQK	9	79	525.2868769722468	NaN	0	525.2869262695312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATMKTELQK_	ENSG00000096696|ENST00000379802|DSP;nc|ENSG00000096696|P15924-2|DSP;nc|ENSG00000096696|P15924-3|DSP	136.26810882979174	0.0003037181779624456	4				NaN	NaN	0	NaN	3279	2583	5863
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5865	18.864	NaN	8925.5	30	0	1388.4	0.106	+			6258	AVSKLYASK	9	71	483.78423504730813	965.5539171614163	2	483.7840270996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVSKLYASK_	ENSG00000115561|ENST00000263856|CHMP3;ENST00000466032.1_1_2:86754275-86769420:-|nuORF;nc|ENSG00000115561|Q9Y3E7-2|CHMP3;nc|ENSG00000115561|Q9Y3E7-3|CHMP3	131.115847015877	0.014647977962315902	4				NaN	NaN	0	NaN	3280	2583	5863
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5866	18.866	NaN	5201.8	30	0	1590.6	0.106	+			16599	HGHVGADL	8	61	403.2010824935691	804.3876120539383	2	403.2012023925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HGHVGADL_	ENSG00000165280|ENST00000358901|VCP;ENST00000480327.1_1_9:35060776-35061606:-|nuORF;ENST00000493886.5_1_9:35057116-35062147:-|nuORF	71.37791200682192	0.3954169775488141	4				NaN	NaN	0	NaN	3281	2583	5863
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5867	18.868	NaN	2097.8	30	0	987.06	0.106			+	12887	GERVRLLSS	9	34	339.5328369140625	NaN	0	339.5328369140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GERVRLLSS_	REV__ENSG00000136099|ENST00000377942|PCDH8;REV__nc|ENSG00000136099|O95206-2|PCDH8;REV__PCDH8|p.L308Pfs*42|1|0.27|ENSG00000136099|chr13:52847514-52847515|-/G|frameshift_variant	25.450171626174864	0.34907449758287085	4				NaN	NaN	0	NaN	3282	2583	5863
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5868	18.869	NaN	2021.2	30	0	293.89	0.106			+	49338	VVSHSRSMV	9	44	501.2625396994148	1000.5105264656296	2	501.26214599609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVSHSRSMV_	REV__ENSG00000165891|ENST00000322886|E2F7;REV__nc|ENSG00000165891|Q96AV8-3|E2F7	35.15202426646627	0.4747332964206883	4				NaN	NaN	0	NaN	3283	2583	5863
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5869	18.871	NaN	2521.5	30	0	215.97	0.106			+	2487	APRDLTPQ	8	63	449.24283263200454	896.4711123308091	2	449.242919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_APRDLTPQ_	REV__FKRP|p.A107T|1|0.17|ENSG00000181027|chr19:46755769-46755769|G/A|missense_variant	44.116797842482775	0.6307669463330267	4				NaN	NaN	0	NaN	3284	2583	5863
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5870	18.873	NaN	2251.4	30	0	863.56	0.037			+	7869	DRHLVKRR	8	41	360.5568737158401	1078.6487917477202	3	361.51019287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DRHLVKRR_	REV__ENSG00000059758|ENST00000261211|CDK17;REV__nc|ENSG00000059758|Q00537-2|CDK17	26.69291269510374	0.7532304684939817	4				NaN	NaN	0	NaN	3285	2583	5863
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5888	18.91	NaN	49944	30	0	8270.1	0.214	+			22959	KVQTAVTMK	9	80	503.29138080608055	1004.5682086789611	2	503.2915344238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVQTAVTMK_	ENSG00000131165|ENST00000397901|CHMP1A;ENST00000550872.1_1_16:89715668-89724092:-|nuORF	178.54760496737404	0.0014418427517892064	4				NaN	NaN	0	NaN	3300	2586	5887
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5889	18.914	NaN	4561.9	30	0	913.71	0.106			+	20652	KGKKYQTVK	9	70	540.3319203755376	1078.6492878178751	2	540.332763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KGKKYQTVK_	REV__ENSG00000165502|ENST00000298289|RPL36AL;REV__ENSG00000241343|ENST00000553110|RPL36A	70.8162118820467	0.13725933411854815	4				NaN	NaN	0	NaN	3301	2586	5887
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5890	18.916	NaN	4854	30	0	580.59	0.106			+	33147	RESIGALN	8	50	430.23531562067654	858.4560783081531	2	430.23492431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RESIGALN_	REV__ENSG00000140553|ENST00000418476|UNC45A;REV__ENST00000471780.1_1_15:91493362-91496943:+|nuORF;REV__ENST00000487875.5_1_15:91491769-91496943:+|nuORF;REV__nc|ENSG00000140553|Q9H3U1-2|UNC45A;REV__nc|ENSG00000140553|Q9H3U1-3|UNC45A	93.19546047674547	0.2677966331495483	4				NaN	NaN	0	NaN	3302	2586	5887
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5891	18.918	NaN	7454.1	30	0	1091.9	0.106	+			34226	RTFSKTIVK	9	86	360.5568737158401	1078.6487917477202	3	360.5570983886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RTFSKTIVK_	ENSG00000133812|ENST00000256190|SBF2;ENST00000533770.5_1_11:9861043-10215451:-|nuORF;nc|ENSG00000133812|Q86WG5-3|SBF2;SBF2|p.E1445Sfs*15|1|0.09|ENSG00000133812|chr11:9808111-9808111|T/-|frameshift_variant;SBF2|p.S1035Y|1|0.43|ENSG00000133812|chr11:9845571-9845571|G/T|missense_variant	65.15724298150197	0.17062369902793603	4				NaN	NaN	0	NaN	3303	2586	5887
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5892	18.92	NaN	3756.5	30	0	713.98	0.106	+			27668	MPSSSHGSM	9	65	460.68294636236055	919.3513397915211	2	460.68341064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MPSSSHGSM_	ENSG00000141380|ENST00000415083|SS18;nc|ENSG00000141380|Q15532-2|SS18;SS18|p.M150I|1|0.4|ENSG00000141380|chr18:26052781-26052781|C/A|missense_variant	90.77665401227738	0.06267569666681755	4				NaN	NaN	0	NaN	3304	2586	5887
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5893	18.921	NaN	1161.1	30	0	143.73	0.034	+			6757	CEAYLKAM	8	51	464.7184753417969	NaN	0	464.7184753417969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_CEAYLKAM_	CAD|p.N1541Mfs*15|1|0.33|ENSG00000084774|chr2:27237773-27237773|A/-|frameshift_variant;ENSG00000084774|ENST00000264705|CAD;ENST00000479002.1_1_2:27457475-27458610:+|nuORF	27.882242232435846	1.7418937515398478	4				NaN	NaN	0	NaN	3305	2586	5887
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5894	18.922	NaN	3143.7	30	0	1132.3	0.139			+	29638	PGGRASPPVG	10	43	447.7430742277092	893.4715955222184	2	447.74285888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PGGRASPPVG_	REV__ENSG00000142347|ENST00000644032|MYO1F;REV__MYO1F|p.L967Cfs*94|1|0.31|ENSG00000142347|chr19:8522785-8522785|G/-|frameshift_variant	35.61828744233558	0.588957954432594	4				NaN	NaN	0	NaN	3306	2586	5887
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5912	18.961	NaN	6547.7	30	0	837.58	0.214	+			33051	REKELESIK	9	73	377.88359979858774	1130.6289699959632	3	377.8836364746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_REKELESIK_	ENSG00000161791|ENST00000335154|FMNL3;nc|ENSG00000161791|Q8IVF7-2|FMNL3;nc|ENSG00000161791|Q8IVF7|FMNL3	49.536043120802724	0.308405419312776	4				NaN	NaN	0	NaN	3321	2589	5911
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5913	18.965	NaN	3837	30	0	1120.4	0.106			+	3208	ASKPIANNR	9	53	485.77446667453955	969.5343804158791	2	485.7744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASKPIANNR_	REV__ENSG00000138246|ENST00000260818|DNAJC13	38.753607047826485	0.4348790777924195	4				NaN	NaN	0	NaN	3322	2589	5911
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5914	18.967	NaN	3617.3	30	0	1269.1	0.106			+	-1	RSSGCLGGTR	10	58	525.7584637944569	1049.5023746557138	2	525.7584838867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_RSSGC(Carbamidomethyl (C))LGGTR_	REV__EIF4E1B|p.G53Afs*110|1|0.36|ENSG00000175766|chr5:176643219-176643219|G/-|frameshift_variant	40.05817265558897	0.5486090488315611	4				NaN	NaN	0	NaN	3323	2589	5911
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5915	18.969	NaN	4925.2	30	0	1681.2	0.106			+	38357	SRPLLPNQ	8	61	462.76632110142674	923.5180892696535	2	462.76641845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SRPLLPNQ_	REV__ENSG00000183379|ENST00000331628|SYNDIG1L	49.44154591367651	0.597725784090933	4				NaN	NaN	0	NaN	3324	2589	5911
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5916	18.97	NaN	1116.3	30	0	244.77	0.106			+	21107	KKQVTQHKL	9	47	555.3427734375	NaN	0	555.3427734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KKQVTQHKL_	REV__ENST00000370801.7_1_1:78098627-78098666:-|nuORF	35.15202426646627	0.3000918603816441	4				NaN	NaN	0	NaN	3325	2589	5911
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5917	18.972	NaN	4589	30	0	402.31	0.106	+			19514	KAVKRPNE	8	62	471.27968760737605	940.5448222815521	2	471.7779235839844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KAVKRPNE_	ENSG00000176102|ENST00000323959|CSTF3	44.116797842482775	0.6307669463330267	4				NaN	NaN	0	NaN	3326	2589	5911
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5918	18.974	NaN	1520.9	30	0	85.714	0.034	+			40978	SVGKGLQVK	9	52	458.284423828125	NaN	0	458.284423828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVGKGLQVK_	ENSG00000070814|ENST00000643257|TCOF1;ENST00000514442.5_1_5:149754639-149771259:+|nuORF;ENST00000515035.5_1_5:149755479-149759349:+|nuORF;nc|ENSG00000070814|Q13428-2|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1;nc|ENSG00000070814|Q13428-5|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428|TCOF1	31.529811441608018	0.3183796599642538	4				NaN	NaN	0	NaN	3327	2589	5911
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5936	19.01	NaN	45770	30	0	13150	0.214	+			11882	FTLPCGLSP	9	76	467.7404907163761	NaN	0	467.74041748046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FTLPCGLSP_	ENST00000520547.3_1_10:81273425-81273470:+|nuORF	63.30626980617807	0.13521764763214936	4				NaN	NaN	0	NaN	3342	2592	5935
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5937	19.014	NaN	35121	30	0	11227	0.106	+			45944	VASAAKLGA	9	58	394.23710051604144	786.4596480988829	2	394.237060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VASAAKLGA_	ENSG00000170835|ENST00000372080|CEL;nc|ENSG00000170835|P19835-2|CEL	79.45101966838831	0.09992237243120712	4				NaN	NaN	0	NaN	3343	2592	5935
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5938	19.016	NaN	20489	30	0	2511	0.106	+			19520	KAVNPGRSL	9	83	471.27968760737605	940.5448222815521	2	471.2795715332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KAVNPGRSL_	ENSG00000103429|ENST00000261658|BFAR;nc|ENSG00000103429|Q9NZS9-2|BFAR	87.69643885390035	0.07135982304947239	4				NaN	NaN	0	NaN	3344	2592	5935
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5939	19.018	NaN	2096.8	30	0	205.76	0.106	+			1172	AENKAKINM	9	70	509.7707119642516	1017.5268709953032	2	509.7712097167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AENKAKINM_	ENSG00000134057|ENST00000256442|CCNB1;nc|ENSG00000134057|P14635-2|CCNB1	51.52775601994872	0.28504342437107444	4				NaN	NaN	0	NaN	3345	2592	5935
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5940	19.02	NaN	353.58	30	0	28.997	0.106	+			44153	TQMKSTFEK	9	28	550.2762451171875	NaN	0	550.2762451171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TQMKSTFEK_	ENSG00000155975|ENST00000324849|VPS37A;nc|ENSG00000155975|Q8NEZ2-2|VPS37A	14.137123925751023	0.3891339986947948	4				NaN	NaN	0	NaN	3346	2592	5935
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5941	19.021	NaN	2073	30	0	355.05	0.035			+	7883	DRQAPELR	8	56	492.7650146484375	NaN	0	492.7650146484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DRQAPELR_	REV__ENSG00000166526|ENST00000299667|ZNF3;REV__ENST00000487620.1_1_7:99668768-99673049:-|nuORF;REV__nc|ENSG00000166526|P17036-2|ZNF3	34.172542307311794	1.7418937515398478	4				NaN	NaN	0	NaN	3347	2592	5935
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5942	19.022	NaN	3665.1	30	0	727.92	0.139			+	44154	TQMSNVKN	8	62	461.22652231207127	920.4384916909426	2	461.2261962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TQMSNVKN_	REV__ENSG00000136960|ENST00000075322|ENPP2;REV__nc|ENSG00000136960|Q13822-2|ENPP2;REV__nc|ENSG00000136960|Q13822-3|ENPP2	42.396135135203025	0.6414440140393314	4				NaN	NaN	0	NaN	3348	2592	5935
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5960	19.06	NaN	113920	30	0	38562	0.169	+			7914	DSEGSTKVL	9	88	468.2377965416007	934.4610401500014	2	468.2376708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DSEGSTKVL_	ENSG00000185658|ENST00000342449|BRWD1;nc|ENSG00000185658|Q9NSI6-3|BRWD1;nc|ENSG00000185658|Q9NSI6|BRWD1	52.936696900407355	0.27249468807391813	4				NaN	NaN	0	NaN	3363	2595	5959
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5961	19.063	NaN	125330	30	0	51331	0.106	+			3979	ATATVSVGK	9	88	417.2397395334267	832.4649261336534	2	417.23992919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATATVSVGK_	ENSG00000261150|ENST00000615648|EPPK1;EPPK1|p.G2015Vfs*36|2|0.33|ENSG00000261150|chr8:143867210-143867210|C/-|frameshift_variant;EPPK1|p.Q829Rfs*8|1|0.05|ENSG00000261150|chr8:143870770-143870770|C/-|frameshift_variant;EPPK1|p.Y695Ifs*68|1|0.36|ENSG00000261150|chr8:143871171-143871172|-/T|frameshift_variant	141.52041321563706	0.009766778904176347	4				NaN	NaN	0	NaN	3364	2595	5959
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5962	19.065	NaN	26394	30	0	6416.8	0.106			+	-1	MEYQQLQPCMK	11	67	491.21816871682427	1470.6326767506728	3	491.2178955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_MEYQQLQPC(Carbamidomethyl (C))M(Oxidation (M))K_	REV__ENSG00000175899|ENST00000318602|A2M	26.749707702089633	0.7092085788826945	4				NaN	NaN	0	NaN	3365	2595	5959
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5963	19.067	NaN	2174.2	30	0	537.79	0.106			+	9094	EGIYKIDL	8	51	475.76160845899415	949.5086639847883	2	475.7610778808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EGIYKIDL_	REV__tr|U7SZG0|U7SZG0_FUSNUAutotransporterdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00737PE=4SV=1	44.116797842482775	0.6307669463330267	4				NaN	NaN	0	NaN	3366	2595	5959
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5964	19.069	NaN	2189.4	30	0	542.66	0.106			+	40626	SVALGLAG	8	34	344.205112744396	NaN	0	344.19781494140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVALGLAG_	REV__ENST00000366756.3_1_6:170597857-170599216:-|nuORF	29.841539824830324	1.7418937515398478	4				NaN	NaN	0	NaN	3367	2595	5959
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5965	19.071	NaN	8294.2	30	0	1958.3	0.106	+			49165	VVMRDPASK	9	67	501.77336547186314	1001.5321780105263	2	501.7735595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VVMRDPASK_	ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1	93.1432384553994	0.056003526918089595	4				NaN	NaN	0	NaN	3368	2595	5959
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5966	19.072	NaN	1496.9	30	0	256.74	0.031	+			29651	PGLAGKNG	8	39	357.20062980237213	712.3867066715443	2	357.20062255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PGLAGKNG_	COL6A2|p.P584Lfs*12|1|0.46|ENSG00000142173|chr21:46124896-46124896|C/-|frameshift_variant;ENSG00000142173|ENST00000300527|COL6A2;nc|ENSG00000142173|P12110-2|COL6A2;nc|ENSG00000142173|P12110-3|COL6A2	35.200714571348534	0.6875396545722289	4				NaN	NaN	0	NaN	3369	2595	5959
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5984	19.108	NaN	62881	30	0	20352	0.214	+			15587	GVHGGLINK	9	99	447.76135148595984	893.5081500387197	2	447.7612609863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVHGGLINK_	ENSG00000108518|ENST00000225655|PFN1	123.9887779854562	0.018785054595953452	4				NaN	NaN	0	NaN	3384	2598	5983
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5985	19.112	NaN	8700.7	30	0	951.31	0.106	+			3688	ATAAAGVLAA	10	67	408.23460538542184	814.4546578376437	2	408.2345886230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATAAAGVLAA_	ENSG00000135063|ENST00000303068|ENTREP1	45.9519527083369	0.4943008177357963	4				NaN	NaN	0	NaN	3385	2598	5983
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5986	19.114	NaN	11544	30	0	3511.5	0.106			+	19962	KEGLHILQH	9	65	537.8062373129216	1073.597921692643	2	537.8069458007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEGLHILQH_	REV__ENSG00000196417|ENST00000396408|ZNF765	76.16968421966216	0.11411088698345859	4				NaN	NaN	0	NaN	3386	2598	5983
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5987	19.116	NaN	6133	30	0	567.88	0.106	+			41274	SVLKGAVTK	9	67	451.7870257292742	901.5594985253484	2	451.7868347167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVLKGAVTK_	ENSG00000163867|ENST00000357182|ZMYM6;ENST00000493328.5_1_1:35455862-35480681:-|nuORF;nc|ENSG00000163867|O95789-1|ZMYM6;ZMYM6|p.F804Lfs*6|1|0.38|ENSG00000163867|chr1:34988670-34988670|A/-|frameshift_variant;ZMYM6|p.L686Ifs*41|1|0.03|ENSG00000163867|chr1:34992324-34992325|-/GAAAGGAAAAGAAAAT|frameshift_variant;ZMYM6|p.N1298Ifs*9|1|0.15|ENSG00000163867|chr1:34987189-34987189|T/-|frameshift_variant;ZMYM6|p.N724Mfs*15|1|0.42|ENSG00000163867|chr1:34988911-34988911|T/-|frameshift_variant	56.43379154798735	0.2433427591689151	4				NaN	NaN	0	NaN	3387	2598	5983
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5988	19.117	NaN	19512	30	0	3367	0.106			+	25963	LSINRQAEP	9	78	514.2799097068075	1026.545266480415	2	514.2803344726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSINRQAEP_	REV__ENSG00000015520|ENST00000381160|NPC1L1;REV__nc|ENSG00000015520|Q9UHC9-2|NPC1L1;REV__nc|ENSG00000015520|Q9UHC9-3|NPC1L1;REV__nc|ENSG00000015520|Q9UHC9-4|NPC1L1;REV__nc|ENSG00000015520|Q9UHC9|NPC1L1;REV__NPC1L1|p.L475Sfs*35|2|0.12|ENSG00000015520|chr7:44538974-44538974|G/-|frameshift_variant	108.08749611321984	0.03094949498378333	4				NaN	NaN	0	NaN	3388	2598	5983
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5989	19.119	NaN	1668.1	30	0	348.92	0.035	+			39978	STMKTYVSK	9	52	522.7736206054688	NaN	0	522.7736206054688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STMKTYVSK_	ENSG00000198919|ENST00000361582|DZIP3;ENST00000495008.5_1_3:108373019-108406879:+|nuORF	41.42661286455405	0.26577678759562784	4				NaN	NaN	0	NaN	3389	2598	5983
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5990	19.12	NaN	10250	30	0	2097.1	0.139	+			39263	STAPAQLGK	9	71	436.74557880352353	871.4766046738471	2	436.74530029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STAPAQLGK_	ENSG00000144867|ENST00000678299|SRPRB	93.1432384553994	0.056003526918089595	4				NaN	NaN	0	NaN	3390	2598	5983
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6008	19.157	NaN	9460.4	30	0	3393.8	0.214			+	-1	VVCQIVRE	8	48	334.85123688912745	1001.5318812675823	3	334.85150146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_VVC(Carbamidomethyl (C))QIVRE_	REV__nc|ENSG00000136710|Q96NT0-2|CCDC115	30.503639358989545	0.7238069182250283	4				NaN	NaN	0	NaN	3405	2601	6007
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6009	19.161	NaN	5634.6	30	0	1036	0.106			+	38628	SSGYVAQK	8	60	420.21640370251345	838.4182544718269	2	420.21636962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSGYVAQK_	REV__ENST00000486831.5_1_3:138189538-138191915:+|nuORF	44.116797842482775	0.6307669463330267	4				NaN	NaN	0	NaN	3406	2601	6007
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6010	19.163	NaN	2399.1	30	0	369.1	0.106	+			15953	HAGPTAHEL	9	55	466.7326965332031	NaN	0	466.7326965332031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HAGPTAHEL_	ENSG00000135966|ENST00000393359|TGFBRAP1;TGFBRAP1|p.R743Afs*28|1|0.5|ENSG00000135966|chr2:105269451-105269451|G/-|frameshift_variant	45.9519527083369	0.2345902329052062	4				NaN	NaN	0	NaN	3407	2601	6007
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6011	19.165	NaN	8608	30	0	4030.3	0.106	+			46660	VGEPKDVIR	9	43	338.197498298346	1011.570665495238	3	338.197509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VGEPKDVIR_	CKAP5|p.V1971Lfs*42|1|0.03|ENSG00000175216|chr11:46744211-46744212|-/TTGAAAAAAAG|frameshift_variant;ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5	31.954861631926434	0.5046124803899898	4				NaN	NaN	0	NaN	3408	2601	6007
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6012	19.167	NaN	14491	30	0	2047.3	0.106			+	33686	RPALLSPGPGR	11	72	374.2242253814977	1119.6508467446931	3	374.2242126464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RPALLSPGPGR_	REV__ENSG00000198455|ENST00000374888|ZXDB	47.227680397652996	0.4590463137409202	4				NaN	NaN	0	NaN	3409	2601	6007
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6013	19.168	NaN	1878.7	30	0	350.12	0.106	+			34038	RSLLEPLGL	9	54	499.305826515692	996.597100098184	2	499.3055114746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RSLLEPLGL_	ENSG00000142619|ENST00000375460|PADI3	62.107414245175825	0.1960472003779324	4				NaN	NaN	0	NaN	3410	2601	6007
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6014	19.17	NaN	3920.2	30	0	410.11	0.034			+	9534	ELCNRVAV	8	69	452.2395318207462	902.4645107082924	2	452.2423095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ELCNRVAV_	REV__ENSG00000172915|ENST00000379939|NBEA;REV__ENSG00000198589|ENST00000651943|LRBA;REV__LRBA|p.L2590*|1|0.41|ENSG00000198589|chr4:150310342-150310342|A/-|frameshift_variant;REV__LRBA|p.T2011Qfs*11|1|0.19|ENSG00000198589|chr4:150599022-150599022|T/-|frameshift_variant;REV__NBEA|p.V2250Lfs*10|1|0.36|ENSG00000172915|chr13:35550967-35550967|A/-|frameshift_variant;REV__nc|ENSG00000172915|Q8NFP9|NBEA;REV__nc|ENSG00000198589|P50851-2|LRBA;REV__nc|ENSG00000198589|P50851|LRBA	47.91560031466742	0.6071945918984287	4				NaN	NaN	0	NaN	3411	2601	6007
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6032	19.208	NaN	25741	30	0	6905.5	0.214	+			22511	KTQAISISK	9	79	488.2950231920649	974.5754934509298	2	488.2950744628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTQAISISK_	ENSG00000130787|ENST00000253083|HIP1R;ENST00000452196.6_1_12:123320097-123341792:+|nuORF;HIP1R|p.A781Pfs*24|1|0.19|ENSG00000130787|chr12:122859467-122859467|G/-|frameshift_variant;HIP1R|p.E1021Vfs*2|1|0.32|ENSG00000130787|chr12:122861412-122861445|AGAGGAGGTGGCCATCCGGCCCAGCACTGCCCCC/-|frameshift_variant;HIP1R|p.N345Mfs*4|3|0.29|ENSG00000130787|chr12:122855584-122855584|C/-|frameshift_variant;nc|ENSG00000130787|O75146-2|HIP1R	167.93327368760816	0.003119697835950078	4				NaN	NaN	0	NaN	3426	2604	6031
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6033	19.211	NaN	11424	30	0	2018.7	0.106	+			34176	RTCGEVIVK	9	77	531.2920297614918	1060.5695065897835	2	531.2926635742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_RTC(Carbamidomethyl (C))GEVIVK_	ENSG00000162702|ENST00000367353|ZNF281;nc|ENSG00000162702|Q9Y2X9-2|ZNF281	85.86182877749512	0.07653218437724067	4				NaN	NaN	0	NaN	3427	2604	6031
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6034	19.213	NaN	1424.9	30	0	241.72	0.106			+	25653	LQVSKGPQ	8	55	428.74766274924855	855.4807725652971	2	428.74755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LQVSKGPQ_	REV__nc|ENSG00000105371|Q14773-2|ICAM4;REV__nc|ENSG00000105371|Q14773-3|ICAM4;REV__nc|ENSG00000105371|Q14773|ICAM4	56.72105179125745	0.5342425954139568	4				NaN	NaN	0	NaN	3428	2604	6031
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6035	19.215	NaN	2712.2	30	0	772.82	0.106	+			45996	VAVAAGVGL	9	44	378.7342071895862	755.4538614459724	2	378.7343444824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VAVAAGVGL_	ENST00000400000.6_1_18:9914029-9931821:+|nuORF	60.403631409065575	0.21025000616765316	4				NaN	NaN	0	NaN	3429	2604	6031
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6036	19.217	NaN	1661.4	30	0	209.2	0.106	+			29414	PAWPPPGLAP	10	60	501.77336547186314	1001.5321780105263	2	504.2627258300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PAWPPPGLAP_	ENSG00000132768|ENST00000255108|DPH2;nc|ENSG00000132768|Q9BQC3-3|DPH2	24.519189625965996	0.6795976720565101	4				NaN	NaN	0	NaN	3430	2604	6031
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6037	19.219	NaN	2877.9	30	0	328.32	0.106			+	23767	LCGVSHSSI	9	66	451.72359523529923	NaN	0	451.72369384765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LCGVSHSSI_	REV__L1PA6_dup546|chr2:49227587-49231532:-|4.547726375381561|0.2927699401366612|3.96|483.0|176|2|anti-sense	63.30626980617807	0.13521764763214936	4				NaN	NaN	0	NaN	3431	2604	6031
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6038	19.22	NaN	2060	30	0	711.42	0.032			+	23015	KVSLLASCRQI	11	46	406.5722879279307	1216.6950343839922	3	406.23712158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KVSLLASCRQI_	REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-13|TTN;REV__nc|ENSG00000155657|Q8WZ42-2|TTN;REV__nc|ENSG00000155657|Q8WZ42-4|TTN;REV__nc|ENSG00000155657|Q8WZ42-5|TTN;REV__nc|ENSG00000155657|Q8WZ42-7|TTN;REV__nc|ENSG00000155657|Q8WZ42-8|TTN;REV__nc|ENSG00000155657|Q8WZ42|TTN;REV__TTN|p.A12650Gfs*4|1|0.4|ENSG00000155657|chr2:178633489-178633490|-/T|frameshift_variant;REV__TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;REV__TTN|p.A7105Cfs*8|1|0.32|ENSG00000155657|chr2:178722523-178722524|-/A|frameshift_variant;REV__TTN|p.D20259Rfs*40|1|0.44|ENSG00000155657|chr2:178583105-178583106|-/T|frameshift_variant;REV__TTN|p.D21555Ifs*6|1|0.33|ENSG00000155657|chr2:178576659-178576659|G/-|frameshift_variant;REV__TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;REV__TTN|p.D9026Afs*9|1|0.26|ENSG00000155657|chr2:178711205-178711208|CTGT/-|frameshift_variant;REV__TTN|p.E15132Sfs*22|1|0.27|ENSG00000155657|chr2:178612094-178612094|C/-|frameshift_variant;REV__TTN|p.E20392Dfs*6|1|0.04|ENSG00000155657|chr2:178582357-178582358|-/TTTAAAATTA|frameshift_variant;REV__TTN|p.E20392Kfs*4|1|0.02|ENSG00000155657|chr2:178582359-178582360|-/TTTT|frameshift_variant;REV__TTN|p.E9224Gfs*8|1|0.04|ENSG00000155657|chr2:178709697-178709698|-/TCTTATGATATCTTGAC|frameshift_variant;REV__TTN|p.F18705Lfs*8|1|0.37|ENSG00000155657|chr2:178590687-178590687|A/-|frameshift_variant;REV__TTN|p.G12742Vfs*2|1|0.05|ENSG00000155657|chr2:178632983-178632983|C/-|frameshift_variant;REV__TTN|p.G14712Dfs*11|1|0.37|ENSG00000155657|chr2:178614341-178614341|G/-|frameshift_variant;REV__TTN|p.G19920Afs*12|1|0.42|ENSG00000155657|chr2:178584961-178584961|G/-|frameshift_variant;REV__TTN|p.G22029Efs*22|2|0.13|ENSG00000155657|chr2:178575125-178575125|T/-|frameshift_variant;REV__TTN|p.I10495Nfs*4|1|0.37|ENSG00000155657|chr2:178685288-178685289|-/T|frameshift_variant;REV__TTN|p.I24998Nfs*2|1|0.35|ENSG00000155657|chr2:178566216-178566217|-/T|frameshift_variant;REV__TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;REV__TTN|p.I9225Cfs*34|1|0.06|ENSG00000155657|chr2:178709695-178709696|-/ATATCCATGAGCA|frameshift_variant;REV__TTN|p.K10923Rfs*104|2|0.23|ENSG00000155657|chr2:178679362-178679362|T/-|frameshift_variant;REV__TTN|p.K11381Nfs*25|1|0.07|ENSG00000155657|chr2:178671133-178671133|T/-|frameshift_variant;REV__TTN|p.K11556Sfs*15|1|0.39|ENSG00000155657|chr2:178652287-178652287|T/-|frameshift_variant;REV__TTN|p.K14271Qfs*5|1|0.02|ENSG00000155657|chr2:178617351-178617352|-/G|frameshift_variant;REV__TTN|p.K26626Nfs*34|1|0.34|ENSG00000155657|chr2:178561331-178561331|T/-|frameshift_variant;REV__TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;REV__TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;REV__TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant;REV__TTN|p.L7142*|1|0.06|ENSG00000155657|chr2:178722407-178722411|TCTTA/-|frameshift_variant;REV__TTN|p.N13487Tfs*49|1|0.34|ENSG00000155657|chr2:178621335-178621335|T/-|frameshift_variant;REV__TTN|p.N15496Ifs*16|1|0.09|ENSG00000155657|chr2:178610116-178610116|T/-|frameshift_variant;REV__TTN|p.N6458Mfs*74|1|0.44|ENSG00000155657|chr2:178725998-178725998|T/-|frameshift_variant;REV__TTN|p.N7648Tfs*27|1|0.32|ENSG00000155657|chr2:178719598-178719598|T/-|frameshift_variant;REV__TTN|p.N8964Tfs*27|1|0.11|ENSG00000155657|chr2:178711988-178711988|T/-|frameshift_variant;REV__TTN|p.P16126Rfs*3|1|0.25|ENSG00000155657|chr2:178607301-178607302|TG/-|frameshift_variant;REV__TTN|p.P22810Hfs*10|1|0.03|ENSG00000155657|chr2:178572780-178572781|-/AAAT|frameshift_variant;REV__TTN|p.V10632Yfs*16|1|0.16|ENSG00000155657|chr2:178683254-178683254|T/-|frameshift_variant;REV__TTN|p.V11008Sfs*13|1|0.33|ENSG00000155657|chr2:178678146-178678147|-/T|frameshift_variant;REV__TTN|p.V11345Ffs*4|1|0.4|ENSG00000155657|chr2:178672044-178672044|T/-|frameshift_variant;REV__TTN|p.V13823*|1|0.28|ENSG00000155657|chr2:178620027-178620027|C/-|frameshift_variant;REV__TTN|p.V22573Cfs*4|2|0.31|ENSG00000155657|chr2:178573492-178573492|C/-|frameshift_variant;REV__TTN|p.V27442Cfs*4|1|0.05|ENSG00000155657|chr2:178558107-178558108|-/A|frameshift_variant;REV__TTN|p.W5728Mfs*3|1|0.07|ENSG00000155657|chr2:178730267-178730268|-/T|frameshift_variant	24.231819034082204	0.7356191775841856	4				NaN	NaN	0	NaN	3432	2604	6031
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6056	19.257	NaN	101940	30	0	35561	0.214	+			19300	KAGEVFIHK	9	99	514.7978675387993	1027.5811821443986	2	514.7982177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAGEVFIHK_	ENSG00000147140|ENST00000276079|NONO;ENST00000486613.6_1_X:70504267-70513876:+|nuORF;ENST00000566277.2_1_16:69791529-69791679:-|nuORF;nc|ENSG00000147140|Q15233-2|NONO	171.33049012695201	0.0025398094975457087	4				NaN	NaN	0	NaN	3447	2607	6055
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6057	19.26	NaN	15066	30	0	4220.8	0.106	+			22211	KSTTTGHLIYK	11	93	416.9027959921901	NaN	0	416.90289306640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KSTTTGHLIYK_	EEF1A1|p.P263Lfs*27|1|0.36|ENSG00000156508|chr6:73518595-73518595|G/-|frameshift_variant;EEF1A2|p.T239Hfs*50|1|0.26|ENSG00000101210|chr20:63493194-63493195|-/G|frameshift_variant;EEF1A2|p.T239Rfs*40|1|0.31|ENSG00000101210|chr20:63493195-63493195|G/-|frameshift_variant;ENSG00000101210|ENST00000217182|EEF1A2;ENSG00000156508|ENST00000309268|EEF1A1;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	62.166158670854095	0.21204349702779623	4				NaN	NaN	0	NaN	3448	2607	6055
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6058	19.263	NaN	19702	30	0	4594.8	0.106	+			41398	SVMPKKSILKK	11	74	420.26848958895727	1257.7836393670718	3	420.2685241699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVMPKKSILKK_	ENSG00000171467|ENST00000361428|ZNF318;nc|ENSG00000171467|Q5VUA4-2|ZNF318;ZNF318|p.A1247Lfs*13|1|0.36|ENSG00000171467|chr6:43340260-43340260|T/-|frameshift_variant;ZNF318|p.N708Tfs*6|1|0.34|ENSG00000171467|chr6:43355211-43355211|T/-|frameshift_variant;ZNF318|p.P785Lfs*37|1|0.23|ENSG00000171467|chr6:43354980-43354980|G/-|frameshift_variant;ZNF318|p.S508Pfs*4|1|0.19|ENSG00000171467|chr6:43355812-43355812|A/-|frameshift_variant;ZNF318|p.T1649Lfs*8|1|0.04|ENSG00000171467|chr6:43339053-43339054|-/GACACTAG|frameshift_variant;ZNF318|p.T2157Qfs*54|1|0.39|ENSG00000171467|chr6:43337529-43337529|T/-|frameshift_variant	58.62960593111931	0.3356877741313683	4				NaN	NaN	0	NaN	3449	2607	6055
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6059	19.264	NaN	4275.2	30	0	1167.2	0.106	+			48657	VTSSETVVK	9	53	475.2633530211296	NaN	0	475.26336669921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTSSETVVK_	ENSG00000128833|ENST00000261839|MYO5C;ENST00000558902.5_1_15:52548900-52571163:-|nuORF;ENST00000560809.5_1_15:52548900-52557395:-|nuORF;MYO5C|p.E1050Sfs*8|1|0.32|ENSG00000128833|chr15:52229192-52229192|C/-|frameshift_variant;MYO5C|p.I480Nfs*10|1|0.5|ENSG00000128833|chr15:52253414-52253415|-/T|frameshift_variant;MYO5C|p.L1151Wfs*19|1|0.17|ENSG00000128833|chr15:52223719-52223719|A/-|frameshift_variant;MYO5C|p.L933Hfs*33|1|0.04|ENSG00000128833|chr15:52237552-52237553|-/T|frameshift_variant;MYO5C|p.L933Sfs*35|1|0.04|ENSG00000128833|chr15:52237553-52237554|-/AAGTGGA|frameshift_variant;nc|ENSG00000128833|Q9NQX4-2|MYO5C	65.46538089061403	0.1260090208616529	4				NaN	NaN	0	NaN	3450	2607	6055
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6060	19.266	NaN	2781.1	30	0	530.14	0.106			+	-1	MYWHEEYNLWL	11	55	533.9045184276636	1598.6917258831904	3	533.9052124023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_M(Oxidation (M))YWHEEYNLWL_	REV__NAALAD2|p.K562Nfs*33|1|0.35|ENSG00000077616|chr11:90177940-90177940|A/-|frameshift_variant	6.659615375131196	0.8393058225873504	4				NaN	NaN	0	NaN	3451	2607	6055
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6061	19.268	NaN	9193.9	30	0	1258.6	0.039			+	-1	WCSKLLLSRE	10	62	431.2342327828772	1290.6808689488316	3	431.2350158691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_WC(Carbamidomethyl (C))SKLLLSRE_	REV__nc|ENSG00000106785|Q14142-4|TRIM14	36.31764250033197	0.5830761606467809	4				NaN	NaN	0	NaN	3452	2607	6055
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6062	19.269	NaN	6105.4	30	0	3333.9	0.143			+	-1	TGTLDMCCLR	10	42	395.8400389915471	1184.4982875748412	3	395.84014892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C),Oxidation (M)	_TGTLDM(Oxidation (M))C(Carbamidomethyl (C))CLR_	REV__ENST00000553622.5_2_14:21899998-21905406:-|nuORF	21.68575002086885	0.7027366847906487	4				NaN	NaN	0	NaN	3453	2607	6055
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6081	19.307	NaN	4215.7	30	0	557.49	0.214	+			19438	KAQSLAITK	9	64	480.29771475925264	958.5808765853053	2	480.2976989746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAQSLAITK_	ENSG00000046651|ENST00000340096|OFD1;ENST00000490265.5_1_X:13771424-13787224:+|nuORF;nc|ENSG00000046651|O75665-3|OFD1	70.39856735676683	0.13906523160059378	4				NaN	NaN	0	NaN	3469	2610	6080
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6082	19.31	NaN	7246	30	0	1703.1	0.106	+			22383	KTIEAGIGK	9	63	458.7759200790699	915.5372872249399	2	458.7763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTIEAGIGK_	ENSG00000100852|ENST00000345122|ARHGAP5;ENST00000407916.2_1_7:55004007-55004829:+|nuORF;nc|ENSG00000100852|Q13017-2|ARHGAP5	76.16968421966216	0.11411088698345859	4				NaN	NaN	0	NaN	3470	2610	6080
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6083	19.312	NaN	10613	30	0	2019.5	0.106				-1	 	0	68	576.9251936701305	1727.7537516105913	3	576.926025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3471	2610	6080
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6084	19.314	NaN	7071.4	30	0	1308.1	0.106	+			32570	QWFLPLMKVR	10	75	445.25376060127667	1332.73945240403	3	445.253662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_QWFLPLM(Oxidation (M))KVR_	ENST00000549260.5_1_12:105152780-105153023:+|nuORF	54.722347961057174	0.4138398245444204	4				NaN	NaN	0	NaN	3472	2610	6080
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6085	19.316	NaN	1366.4	30	0	170.86	0.106	+			21354	KMAGNEYVG	9	49	484.7301940917969	NaN	0	484.7301940917969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KMAGNEYVG_	ENSG00000115419|ENST00000320717|GLS;ENST00000461965.5_1_2:191775005-191792247:+|nuORF;ENST00000495444.1_1_2:191785873-191789325:+|nuORF;nc|ENSG00000115419|O94925-3|GLS	47.657333605630114	0.2228375344433429	4				NaN	NaN	0	NaN	3473	2610	6080
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6086	19.318	NaN	3247.6	30	0	658.64	0.033	+			44542	TTAAPSPPR	9	49	449.24283263200454	896.4711123308091	2	449.24267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TTAAPSPPR_	ENSG00000177283|ENST00000374694|FZD8	69.6276240434122	0.14239879520340665	4				NaN	NaN	0	NaN	3474	2610	6080
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6087	19.318	NaN	5179.2	30	0	581.21	0.137	+			27779	MRPSVSAG	8	59	402.70504863034944	803.3955443274989	2	402.7049560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MRPSVSAG_	ENST00000367025.7_1_1:209933439-209933502:+|nuORF	38.80614096846853	0.6637206697844082	4				NaN	NaN	0	NaN	3475	2610	6080
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6105	19.357	NaN	22442	30	0	3543.5	0.214	+			16449	HESRQITQV	9	87	549.2888584805244	1096.5631640278486	2	549.2891845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HESRQITQV_	ENSG00000104695|ENST00000221138|PPP2CB;ENSG00000113575|ENST00000481195|PPP2CA;ENSG00000119414|ENST00000373547|PPP6C;ENSG00000149923|ENST00000279387|PPP4C;ENST00000566749.5_1_16:30094185-30096380:+|nuORF;ENST00000567040.5_1_16:30087698-30094972:+|nuORF;nc|ENSG00000113575|P67775-2|PPP2CA;nc|ENSG00000119414|O00743-2|PPP6C;nc|ENSG00000119414|O00743-3|PPP6C	138.06239232086	0.011389075116295402	4				NaN	NaN	0	NaN	3490	2613	6104
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6106	19.36	NaN	8528.1	30	0	729.65	0.106	+			32947	REAVSKTAL	9	72	487.78520061754085	973.5558483018817	2	487.7849426269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_REAVSKTAL_	ENSG00000084093|ENST00000309042|REST;nc|ENSG00000084093|Q13127-4|REST	85.86182877749512	0.07653218437724067	4				NaN	NaN	0	NaN	3491	2613	6104
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6107	19.362	NaN	2863.1	30	0	278.34	0.106	+			18738	ITIDKATGK	9	59	473.7816162109375	NaN	0	473.7816162109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ITIDKATGK_	ENSG00000183207|ENST00000595090|RUVBL2;ENST00000594017.5_1_19:49497156-49513425:+|nuORF;ENST00000596247.5_1_19:49507512-49519096:+|nuORF;nc|ENSG00000183207|Q9Y230-2|RUVBL2	65.46538089061403	0.1260090208616529	4				NaN	NaN	0	NaN	3492	2613	6104
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6108	19.364	NaN	10555	30	0	2551	0.106				-1	 	0	66	458.2663884940562	457.2591120274562	1	458.2662353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3493	2613	6104
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6109	19.366	NaN	5686.6	30	0	1866.3	0.106	+			13276	GIVFCHSRRVL	11	49	429.5759501788451	1285.7060211367354	3	429.57586669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GIVFCHSRRVL_	ENSG00000170312|ENST00000395284|CDK1	27.047317107675042	0.7060868989289394	4				NaN	NaN	0	NaN	3494	2613	6104
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6110	19.368	NaN	62631	30	0	18434	0.034	+			35611	SCCPVGCAK	9	84	462.68942719083105	923.3643014484621	2	462.69024658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_SCC(Carbamidomethyl (C))PVGCAK_	CON__P67983;ENSG00000125144|ENST00000379811|MT1G;ENSG00000125148|ENST00000245185|MT2A;ENSG00000169688|ENST00000334346|MT1B;ENSG00000187193|ENST00000394485|MT1X;ENSG00000205364|ENST00000379818|MT1M;ENST00000330439.6_1_16:56660742-56660880:+|nuORF;ENST00000562017.1_1_16:56643131-56643263:+|nuORF;ENST00000563985.1_1_16:56642884-56643263:+|nuORF;ENST00000567300.1_1_16:56642646-56643263:+|nuORF;nc|ENSG00000125144|P13640-2|MT1G;nc|ENSG00000169715|P04732|MT1E	98.62937762414208	0.04060045538121712	4				NaN	NaN	0	NaN	3495	2613	6104
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6111	19.368	NaN	3373.9	30	0	789.11	0.138	+			26672	LVGDVGQTV	9	57	444.24509531702495	886.4756377008499	2	444.2451477050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LVGDVGQTV_	ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65623404-65625570:-|nuORF	47.657333605630114	0.33044192980041115	4				NaN	NaN	0	NaN	3496	2613	6104
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6129	19.406	NaN	6630.8	30	0	1703.5	0.214			+	-1	MAVFSAVMTIM	11	40	411.5288094986445	1231.5645990961334	3	411.52886962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_M(Oxidation (M))AVFSAVMTIM(Oxidation (M))_	REV__ENSG00000137266|ENST00000406686|SLC22A23;REV__ENST00000433689.2_1_6:3324066-3324352:-|nuORF;REV__ENST00000467144.5_1_6:3298407-3324352:-|nuORF;REV__nc|ENSG00000137266|A1A5C7-2|SLC22A23;REV__nc|ENSG00000137266|A1A5C7-4|SLC22A23;REV__SLC22A23|p.E648Sfs*36|1|0.22|ENSG00000137266|chr6:3273174-3273174|C/-|frameshift_variant	26.063383197487333	0.7164075632144343	4				NaN	NaN	0	NaN	3511	2616	6128
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6130	19.409	NaN	6142.7	30	0	1216.7	0.106			+	39075	SSSRLAEL	8	56	431.7346993611121	NaN	0	431.7347412109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSSRLAEL_	REV__CDC42BPB|p.L928Ffs*26|1|0.05|ENSG00000198752|chr14:102963098-102963099|-/A|frameshift_variant;REV__CDC42BPB|p.N918Tfs*5|1|0.27|ENSG00000198752|chr14:102963129-102963129|T/-|frameshift_variant;REV__CDC42BPB|p.Q1073Rfs*38|2|0.31|ENSG00000198752|chr14:102950558-102950558|G/-|frameshift_variant;REV__ENSG00000198752|ENST00000361246|CDC42BPB	63.30626980617807	1.7418937515398478	4				NaN	NaN	0	NaN	3512	2616	6128
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6131	19.411	NaN	4221.6	30	0	1026.8	0.106			+	3487	ASSGQEPKA	9	57	437.71667127317727	NaN	0	437.7165832519531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASSGQEPKA_	REV__ENSG00000260287|ENST00000569055|TBC1D3G;REV__ENSG00000273513|ENST00000620247|TBC1D3K;REV__ENSG00000274226|ENST00000610350|TBC1D3H;REV__ENSG00000274419|ENST00000616101|TBC1D3D;REV__ENSG00000274512|ENST00000612727|TBC1D3L;REV__ENSG00000274611|ENST00000620215|TBC1D3;REV__ENSG00000274808|ENST00000611257|TBC1D3B;REV__ENSG00000274933|ENST00000621034|TBC1D3I;REV__ENSG00000275954|ENST00000620210|TBC1D3F;REV__ENSG00000278299|ENST00000622206|TBC1D3C;REV__ENSG00000278599|ENST00000621587|TBC1D3E;REV__nc|ENSG00000275954|A6NER0|TBC1D3F	65.46538089061403	0.1260090208616529	4				NaN	NaN	0	NaN	3513	2616	6128
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6132	19.413	NaN	4181.2	30	0	573.99	0.106	+			26813	LVSRTALQ	8	59	444.2690996421593	NaN	0	444.26904296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LVSRTALQ_	ENSG00000169006|ENST00000306928|NTSR2	71.29570347882199	1.7418937515398478	4				NaN	NaN	0	NaN	3514	2616	6128
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6133	19.415	NaN	1916.8	30	0	197.98	0.106	+			34486	RVDGPASNLK	10	60	528.7929285865255	1055.5713042398509	2	528.7936401367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RVDGPASNLK_	COL6A3|p.A2956Lfs*45|1|0.33|ENSG00000163359|chr2:237336234-237336234|C/-|frameshift_variant;COL6A3|p.A2957Lfs*44|1|0.33|ENSG00000163359|chr2:237336232-237336232|A/-|frameshift_variant;COL6A3|p.G1770Vfs*12|1|0.05|ENSG00000163359|chr2:237366878-237366879|-/TGGTGTAA|frameshift_variant;COL6A3|p.G2207Efs*35|1|0.22|ENSG00000163359|chr2:237354908-237354908|G/-|frameshift_variant;COL6A3|p.G3016Vfs*19|1|0.34|ENSG00000163359|chr2:237334810-237334810|G/-|frameshift_variant;COL6A3|p.P2319Qfs*12|1|0.06|ENSG00000163359|chr2:237348359-237348359|G/-|frameshift_variant;COL6A3|p.V1771Sfs*8|3|0.08|ENSG00000163359|chr2:237366876-237366876|C/-|frameshift_variant;ENSG00000163359|ENST00000295550|COL6A3;nc|ENSG00000163359|P12111-2|COL6A3;nc|ENSG00000163359|P12111-3|COL6A3;nc|ENSG00000163359|P12111-4|COL6A3;nc|ENSG00000163359|P12111-5|COL6A3	81.52500206392136	0.18316182710238588	4				NaN	NaN	0	NaN	3515	2616	6128
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6134	19.417	NaN	707.24	30	0	71.073	0.048				-1	 	0	37	627.6312570163086	1879.8719416491258	3	627.966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3516	2616	6128
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6135	19.418	NaN	719.28	30	0	93.965	0.142			+	16008	HAQESVTLK	9	46	506.7744328614699	NaN	0	506.77435302734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HAQESVTLK_	REV__AKAP12|p.A352V|1|0.12|ENSG00000131016|chr6:151349446-151349446|C/T|missense_variant	56.43379154798735	0.16452882468284893	4				NaN	NaN	0	NaN	3517	2616	6128
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6153	19.457	NaN	188160	30	0	64410	0.147	+			49166	VVMRDPASK	9	72	501.77336547186314	1001.5321780105263	2	501.773681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVMRDPASK_	ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1	181.4070731898895	0.0011547877412507563	4				NaN	NaN	0	NaN	3532	2619	6152
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6154	19.459	NaN	95520	30	0	15589	0.106			+	-1	NKCLWRDWWFC	11	83	557.5834330399737	1669.7284697201208	3	557.5838012695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_NKC(Carbamidomethyl (C))LWRDWWFC(Carbamidomethyl (C))_	REV__ENST00000491103.5_1_6:10748006-10756744:+|nuORF	3.211326085083802	0.8683767028876275	4				NaN	NaN	0	NaN	3533	2619	6152
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6155	19.461	NaN	5369.3	30	0	800.39	0.106			+	27465	MLPPFGSPGA	10	64	487.2422435728606	972.4699342125213	2	487.2419738769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MLPPFGSPGA_	REV__ENSG00000019144|ENST00000600882|PHLDB1;REV__ENST00000392852.7_1_11:118512280-118516420:+|nuORF;REV__ENST00000524713.5_1_11:118512334-118527530:+|nuORF;REV__ENST00000530994.5_1_11:118515264-118527530:+|nuORF;REV__ENST00000532517.5_1_11:118498004-118527530:+|nuORF;REV__nc|ENSG00000019144|Q86UU1-2|PHLDB1	53.351449002276354	0.42630798468005626	4				NaN	NaN	0	NaN	3534	2619	6152
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6156	19.463	NaN	4634.4	30	0	753.12	0.106			+	37297	SLCPTPRQ	8	54	451.2313034947194	900.4480540562388	2	451.23126220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLCPTPRQ_	REV__ENST00000428931.5_1_1:154242855-154243155:+|nuORF	32.81241826257853	0.7059802730411993	4				NaN	NaN	0	NaN	3535	2619	6152
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6157	19.465	NaN	1517.9	30	0	506.85	0.106			+	5724	AVFPFLLSAPA	11	36	378.2177669334261	1131.6314714004784	3	378.21795654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVFPFLLSAPA_	REV__ENST00000486847.2_1_19:12774617-12777525:-|nuORF	27.047317107675042	0.7060868989289394	4				NaN	NaN	0	NaN	3536	2619	6152
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6158	19.467	NaN	894.68	30	0	109.09	0.106			+	-1	TRFCMRVK	8	53	549.2888584805244	1096.5631640278486	2	549.30126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_TRFC(Carbamidomethyl (C))MRVK_	REV__ENST00000414220.2_1_5:98205370-98205541:-|nuORF	29.14955571784316	0.7342621283720113	4				NaN	NaN	0	NaN	3537	2619	6152
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6159	19.469	NaN	586.46	30	0	71.274	0.046				-1	 	0	35	580.9346923828125	NaN	0	580.9346923828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3538	2619	6152
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6177	19.505	NaN	129800	30	0	71214	0.145	+			49138	VVMAADRSLKK	11	69	406.5722879279307	1216.6950343839922	3	406.572509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVMAADRSLKK_	ENSG00000189241|ENST00000368608|TSPYL1	60.1669710687717	0.32196467475348695	4				NaN	NaN	0	NaN	3553	2622	6176
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6178	19.507	NaN	57900	30	0	32499	0.106	+			49167	VVMRDPASK	9	66	334.85123688912745	1001.5318812675823	3	334.8514404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVMRDPASK_	ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1	42.86426827375447	0.38666266728046506	4				NaN	NaN	0	NaN	3554	2622	6176
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6179	19.509	NaN	11430	30	0	5018.4	0.106			+	43321	TGAPLRSGP	9	56	428.2376186803801	NaN	0	428.237548828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TGAPLRSGP_	REV__ENSG00000176623|ENST00000406452|RMDN1;REV__nc|ENSG00000176623|Q96DB5-2|RMDN1;REV__nc|ENSG00000176623|Q96DB5-3|RMDN1;REV__RMDN1|p.N157Kfs*2|1|0.46|ENSG00000176623|chr8:86486508-86486509|-/T|frameshift_variant	39.252832667884924	0.27938773122138094	4				NaN	NaN	0	NaN	3555	2622	6176
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6180	19.511	NaN	15074	30	0	2098.9	0.106	+			985	AEKGKPVTL	9	82	471.7843610142671	941.5541690953343	2	471.7841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEKGKPVTL_	ENSG00000106258|ENST00000222982|CYP3A5	117.81106730687013	0.02252488733980868	4				NaN	NaN	0	NaN	3556	2622	6176
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6181	19.513	NaN	16703	30	0	3665.4	0.106	+			4140	ATEQPLTAK	9	77	479.7636739925689	957.5127950519378	2	479.7635192871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATEQPLTAK_	ENSG00000120725|ENST00000394817|SIL1	125.71293069911285	0.017741295328254008	4				NaN	NaN	0	NaN	3557	2622	6176
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6182	19.515	NaN	1911.3	30	0	387.34	0.106			+	31688	QNKWSTKK	8	49	510.28704833984375	NaN	0	510.28704833984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QNKWSTKK_	REV__ENSG00000121236|ENST00000380097|TRIM6;REV__nc|ENSG00000121236|Q9C030|TRIM6	62.107414245175825	1.7418937515398478	4				NaN	NaN	0	NaN	3558	2622	6176
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6183	19.516	NaN	7140.2	30	0	1804.7	0.038	+			22410	KTKFVDGVSTV	11	55	394.22514592158484	1179.6536083649546	3	394.2255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KTKFVDGVSTV_	ENSG00000136824|ENST00000374793|SMC2	28.5767321226876	0.690044582712672	4				NaN	NaN	0	NaN	3559	2622	6176
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6201	19.553	NaN	15550	30	0	3634.9	0.214	+			5010	ATSAVTVTR	9	56	453.25593321389437	904.4973134945888	2	453.2558898925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSAVTVTR_	ENSG00000123444|ENST00000430070|KBTBD4;nc|ENSG00000123444|Q9NVX7-1|KBTBD4;nc|ENSG00000123444|Q9NVX7-3|KBTBD4	154.1183686248401	0.005909203230691971	4				NaN	NaN	0	NaN	3574	2625	6200
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6202	19.556	NaN	9936.7	30	0	1733	0.106	+			9095	EGKEHVPKQRQ	11	57	445.9089020681675	1334.7048768047025	3	445.5743408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EGKEHVPKQRQ_	PCDHB2|p.R9H|1|0.36|ENSG00000112852|chr5:141094816-141094816|G/A|missense_variant	43.650786325866115	0.5079891456189096	4				NaN	NaN	0	NaN	3575	2625	6200
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6203	19.558	NaN	4053.2	30	0	824.97	0.106	+			16489	HETSKMKVL	9	65	536.7943676260685	1071.574182318937	2	536.7951049804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HETSKMKVL_	ENSG00000067445|ENST00000173898|TRO;ENSG00000179222|ENST00000326587|MAGED1;ENST00000475183.1_1_X:54953428-54957230:+|nuORF;ENST00000492706.5_1_X:54953428-54957450:+|nuORF;ENST00000494718.5_1_X:51643260-51645023:+|nuORF;nc|ENSG00000067445|Q12816-2|TRO;nc|ENSG00000067445|Q12816-3|TRO;nc|ENSG00000067445|Q12816-4|TRO;nc|ENSG00000067445|Q12816-5|TRO;nc|ENSG00000179222|Q9Y5V3-2|MAGED1;TRO|p.S1034Rfs*10|1|0.07|ENSG00000067445|chrX:54929826-54929826|C/-|frameshift_variant	69.6276240434122	0.14239879520340665	4				NaN	NaN	0	NaN	3576	2625	6200
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6204	19.56	NaN	3496.2	30	0	448	0.106			+	-1	VLMLCLALGV	10	48	363.54497274315537	1087.6130888296661	3	363.5450134277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_VLMLC(Carbamidomethyl (C))LALGV_	REV__ENSG00000167191|ENST00000300571|GPRC5B;REV__nc|ENSG00000167191|Q9NZH0-2|GPRC5B	39.252832667884924	0.5560298534376815	4				NaN	NaN	0	NaN	3577	2625	6200
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6205	19.562	NaN	4530.9	30	0	400.28	0.106				-1	SAGIRMINNRG	11	62	402.2119627877224	1203.6140589633674	3	402.2220153808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_SAGIRM(Oxidation (M))INNRG_	ENSG00000072756|ENST00000251607|TRNT1;ENST00000482311.1_1_3:3170856-3182346:+|nuORF;nc|ENSG00000072756|Q96Q11-2|TRNT1;TRNT1|p.M158Vfs*5|1|0.16|ENSG00000072756|chr3:3140638-3140639|TA/-|frameshift_variant;TRNT1|p.S418Vfs*11|1|0.4|ENSG00000072756|chr3:3148095-3148095|A/-|frameshift_variant	38.753607047826485	0.5749975102143227	4				NaN	NaN	0	NaN	3578	2625	6200
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6206	19.564	NaN	6223.4	30	0	1468.2	0.032	+			33270	RGGRKGGP	8	63	392.7313147644198	783.4480765956396	2	392.73150634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RGGRKGGP_	ENSG00000167962|ENST00000562103|ZNF598;ENST00000565396.5_1_16:2048964-2050409:-|nuORF;nc|ENSG00000167962|Q86UK7-2|ZNF598;nc|ENSG00000167962|Q86UK7-3|ZNF598;nc|ENSG00000167962|Q86UK7-4|ZNF598;nc|ENSG00000167962|Q86UK7|ZNF598;ZNF598|p.P646Afs*20|1|0.5|ENSG00000167962|chr16:1999075-1999076|-/G|frameshift_variant	40.5726180659479	0.6527593143185008	4				NaN	NaN	0	NaN	3579	2625	6200
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6207	19.564	NaN	15703	30	0	3169.7	0.148	+			48911	VVDNGSGMCK	10	74	505.2250887320941	1008.4356245309882	2	505.22564697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VVDNGSGMCK_	ACTBL2|p.R29Gfs*7|1|0.37|ENSG00000169067|chr5:57482623-57482623|G/-|frameshift_variant;ENSG00000075624|ENST00000646664|ACTB;ENSG00000169067|ENST00000423391|ACTBL2;ENST00000418351.1_1_15:44282253-44282364:-|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000477812.1_1_7:5569027-5569288:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF	83.6470233535746	0.16744595502813267	4				NaN	NaN	0	NaN	3580	2625	6200
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6225	19.602	NaN	11310	30	0	1260.8	0.214	+			34959	SAAKSLLNK	9	76	466.28190973243795	930.5492665316759	2	466.2818603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAAKSLLNK_	ENST00000474131.5_1_10:75577276-75601951:-|nuORF;ENST00000492020.5_1_10:75597207-75607060:-|nuORF;nc|ENSG00000058404|Q13554-3|CAMK2B;nc|ENSG00000058404|Q13554-4|CAMK2B;nc|ENSG00000058404|Q13554-5|CAMK2B;nc|ENSG00000148660|Q13555-10|CAMK2G;nc|ENSG00000148660|Q13555-2|CAMK2G;nc|ENSG00000148660|Q13555-3|CAMK2G;nc|ENSG00000148660|Q13555-4|CAMK2G;nc|ENSG00000148660|Q13555-7|CAMK2G;nc|ENSG00000148660|Q13555-8|CAMK2G;nc|ENSG00000148660|Q13555-9|CAMK2G;nc|ENSG00000148660|Q13555|CAMK2G	143.37361013837676	0.008897369944672323	4				NaN	NaN	0	NaN	3595	2628	6224
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6226	19.606	NaN	17739	30	0	2443.2	0.106	+			35815	SEAREKAVL	9	80	501.7809922538963	1001.5474315745926	2	501.7812194824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEAREKAVL_	ENSG00000076944|ENST00000221283|STXBP2;ENST00000594221.5_1_19:7706941-7707474:+|nuORF;nc|ENSG00000076944|Q15833-2|STXBP2;nc|ENSG00000076944|Q15833-3|STXBP2	79.71258880314673	0.09879134589249085	4				NaN	NaN	0	NaN	3596	2628	6224
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6227	19.608	NaN	6693	30	0	703.26	0.106			+	45916	VAQPTPPTK	9	64	469.7672373400708	937.5199217469416	2	470.2664489746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VAQPTPPTK_	REV__PHF12|p.P882Qfs*30|1|0.22|ENSG00000109118|chr17:28906891-28906891|G/-|frameshift_variant	44.116797842482775	0.37197099687881774	4				NaN	NaN	0	NaN	3597	2628	6224
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6228	19.61	NaN	1131.3	30	0	131.05	0.106			+	16726	HLGRFARE	8	47	493.2689208984375	NaN	0	493.2689208984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HLGRFARE_	REV__ENSG00000040608|ENST00000043402|RTN4R	31.954861631926434	1.7418937515398478	4				NaN	NaN	0	NaN	3598	2628	6224
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6229	19.612	NaN	1004.1	30	0	67.928	0.106			+	45913	VAQKWINAK	9	50	529.3094482421875	NaN	0	529.3094482421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VAQKWINAK_	REV__DSEL|p.L827Wfs*85|1|0.11|ENSG00000171451|chr18:67512159-67512159|A/-|frameshift_variant;REV__DSEL|p.R969Efs*16|1|0.36|ENSG00000171451|chr18:67511734-67511734|T/-|frameshift_variant;REV__DSEL|p.R969Kfs*4|1|0.26|ENSG00000171451|chr18:67511733-67511734|-/T|frameshift_variant;REV__ENSG00000171451|ENST00000310045|DSEL	37.15910966729921	0.2899585034171616	4				NaN	NaN	0	NaN	3599	2628	6224
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6230	19.613	NaN	2089.8	30	0	315.34	0.106	+			5374	ATYEQGVEK	9	55	512.7512295245524	1023.4879061159048	2	512.751708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATYEQGVEK_	nc|ENSG00000211747|A0A075B6N2|TRBV20-1	65.15724298150197	0.17062369902793603	4				NaN	NaN	0	NaN	3600	2628	6224
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6231	19.615	NaN	2843.9	30	0	310.93	0.033	+			14535	GTDSGSVLK	9	55	432.2267150878906	NaN	0	432.2267150878906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GTDSGSVLK_	ENSG00000010319|ENST00000231721|SEMA3G	76.7741389293348	0.08243745921263976	4				NaN	NaN	0	NaN	3601	2628	6224
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6249	19.652	NaN	59383	30	0	12135	0.214	+			38450	SSAPPLTGK	9	83	429.2400503518882	856.4655477705764	2	429.23980712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSAPPLTGK_	ENSG00000100105|ENST00000266269|PATZ1;nc|ENSG00000100105|Q9HBE1-2|PATZ1;nc|ENSG00000100105|Q9HBE1-3|PATZ1;nc|ENSG00000100105|Q9HBE1-4|PATZ1;PATZ1|p.G285Pfs*14|1|0.11|ENSG00000100105|chr22:31344749-31344750|CC/-|frameshift_variant	98.58198989935565	0.04066992115528678	4				NaN	NaN	0	NaN	3616	2631	6248
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6250	19.655	NaN	3459.9	30	0	457.86	0.106			+	34603	RVNPKNVA	8	60	449.26651359348546	896.5184742537709	2	449.2666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RVNPKNVA_	REV__tr|U7T011|U7T011_FUSNUCyclohexadienyldehydrataseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00848PE=3SV=1	52.29916861842294	0.578018602984656	4				NaN	NaN	0	NaN	3617	2631	6248
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6251	19.658	NaN	3345.4	30	0	1474.8	0.106			+	27298	MGRVQEPG	8	52	437.2158235989126	NaN	0	437.2156982421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MGRVQEPG_	REV__ENSG00000185070|ENST00000330753|FLRT2;REV__FLRT2|p.C339Y|1|0.38|ENSG00000185070|chr14:85622530-85622530|G/A|missense_variant;REV__FLRT2|p.L542Cfs*5|1|0.43|ENSG00000185070|chr14:85623130-85623130|C/-|frameshift_variant	35.200714571348534	1.7418937515398478	4				NaN	NaN	0	NaN	3618	2631	6248
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6252	19.659	NaN	3038.3	30	0	550.05	0.106			+	-1	SVQTVNVGQ	9	56	487.2496143765514	972.4846758199028	2	487.2489929199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SVQTVNVGQ_	REV__ENST00000590121.1_1_19:12917502-12918326:+|nuORF	40.77816245573522	0.41113185337114944	4				NaN	NaN	0	NaN	3619	2631	6248
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6253	19.661	NaN	16154	30	0	1461.4	0.106	+			42978	TEKGKDVEL	9	83	509.77428560624566	1017.5340182792913	2	509.7740173339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TEKGKDVEL_	nc|ENSG00000211714|A0A075B6L6|TRBV7-3;nc|ENSG00000282939|A0A1B0GXF2|TRBV7-2	101.25262130126117	0.03792372629710479	4				NaN	NaN	0	NaN	3620	2631	6248
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6254	19.663	NaN	3781.8	30	0	314.91	0.037	+			34273	RTKEKMSIK	9	64	374.2205532929346	NaN	0	374.2205810546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RTKEKMSIK_	ENSG00000121570|ENST00000335658|DPPA4;ENST00000463966.5_1_3:109047772-109056364:-|nuORF	85.86182877749512	0.05129763505578642	4				NaN	NaN	0	NaN	3621	2631	6248
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6255	19.664	NaN	1570.5	30	0	232.84	0.141			+	43604	TIMEMASIMS	10	53	557.2524897762435	1112.4904266192868	2	557.253173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TIMEMASIMS_	REV__ENST00000429345.5_1_6:6569668-6622924:-|nuORF	27.882242232435846	0.6521336255503853	4				NaN	NaN	0	NaN	3622	2631	6248
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6273	19.703	NaN	32696	30	0	14707	0.214	+			5297	ATVKEQIVK	9	78	508.3108520744049	1014.6071512156099	2	508.3109436035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATVKEQIVK_	ENSG00000133103|ENST00000455146|COG6	201.61192446435922	2.6499037923345906E-05	4				NaN	NaN	0	NaN	3637	2634	6272
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6274	19.707	NaN	17245	30	0	3021	0.106			+	-1	WWMWRMFSSHR	11	79	547.9120991356028	1640.7144680070082	3	547.9124755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Oxidation (M)	_WWM(Oxidation (M))WRM(Oxidation (M))FSSHR_	REV__ENSG00000072042|ENST00000381346|RDH11;REV__ENST00000553582.5_1_14:68129224-68156858:-|nuORF;REV__ENST00000553816.5_1_14:68151682-68162420:-|nuORF;REV__ENST00000554493.1_1_14:68129224-68156947:-|nuORF;REV__nc|ENSG00000072042|Q8TC12-2|RDH11;REV__nc|ENSG00000072042|Q8TC12-3|RDH11	5.698786898958082	0.8438047409760123	4				NaN	NaN	0	NaN	3638	2634	6272
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6275	19.709	NaN	11911	30	0	6374.6	0.106	+			41475	SVNSHIYQR	9	53	368.5243669835764	1102.5512715509292	3	368.52459716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVNSHIYQR_	ENSG00000177409|ENST00000318238|SAMD9L;SAMD9L|p.N1174Tfs*28|1|0.24|ENSG00000177409|chr7:93132451-93132451|T/-|frameshift_variant	36.446750945000026	0.4619375763483977	4				NaN	NaN	0	NaN	3639	2634	6272
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6276	19.71	NaN	2712.1	30	0	335.67	0.106	+			16649	HIAEPNYGK	9	71	514.7614665402393	1027.5083801472786	2	514.761962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HIAEPNYGK_	ENSG00000167325|ENST00000300738|RRM1	47.657333605630114	0.33044192980041115	4				NaN	NaN	0	NaN	3640	2634	6272
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6277	19.712	NaN	2322.3	30	0	239.52	0.106			+	47834	VSLADPELC	9	59	473.7328037810246	NaN	0	473.7328186035156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSLADPELC_	REV__ENST00000254528.3_1_18:2847890-2884982:+|nuORF	29.14955571784316	0.3303970763161698	4				NaN	NaN	0	NaN	3641	2634	6272
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6278	19.714	NaN	1471.5	30	0	407.1	0.034				-1	MGKNECMQ	8	52	478.6847645996022	955.3549762660044	2	478.6850891113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_MGKNECM(Oxidation (M))Q_	ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;TRRAP|p.K3443Sfs*19|1|0.28|ENSG00000196367|chr7:99004246-99004246|A/-|frameshift_variant	25.450171626174864	0.7628259754767981	4				NaN	NaN	0	NaN	3642	2634	6272
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6279	19.715	NaN	1734.4	30	0	275.56	0.137	+			25270	LNPVTQAP	8	40	420.2332401576849	838.4519273821699	2	420.2351989746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LNPVTQAP_	ENSG00000078747|ENST00000374864|ITCH;ITCH-PIGU|1|fusion;ITCH-PIGU|2|fusion;ITCH-PIGU|3|fusion;nc|ENSG00000289720|Q96J02-3|ITCH;nc|ENSG00000289720|Q96J02|ITCH	30.503639358989545	0.7238069182250283	4				NaN	NaN	0	NaN	3643	2634	6272
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6297	19.751	NaN	8116	30	0	2383.9	0.214	+			35612	SCCPVGCAK	9	55	462.68942719083105	923.3643014484621	2	462.69000244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SCC(Carbamidomethyl (C))PVGCAK_	CON__P67983;ENSG00000125144|ENST00000379811|MT1G;ENSG00000125148|ENST00000245185|MT2A;ENSG00000169688|ENST00000334346|MT1B;ENSG00000187193|ENST00000394485|MT1X;ENSG00000205364|ENST00000379818|MT1M;ENST00000330439.6_1_16:56660742-56660880:+|nuORF;ENST00000562017.1_1_16:56643131-56643263:+|nuORF;ENST00000563985.1_1_16:56642884-56643263:+|nuORF;ENST00000567300.1_1_16:56642646-56643263:+|nuORF;nc|ENSG00000125144|P13640-2|MT1G;nc|ENSG00000169715|P04732|MT1E	101.60071028292904	0.0375685401170269	4				NaN	NaN	0	NaN	3658	2637	6296
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6298	19.754	NaN	27174	30	0	11143	0.106	+			48887	VVDENAVAK	9	67	472.75572002985535	943.4968871265107	2	472.7556457519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVDENAVAK_	ADH1B|p.A318Lfs*29|1|0.06|ENSG00000196616|chr4:99311533-99311533|C/-|frameshift_variant;ENSG00000187758|ENST00000209668|ADH1A;ENSG00000196616|ENST00000305046|ADH1B;ENSG00000248144|ENST00000515683|ADH1C;nc|ENSG00000196616|P00325-2|ADH1B	123.20810148215591	0.019257656778428764	4				NaN	NaN	0	NaN	3659	2637	6296
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6299	19.757	NaN	4851.5	30	0	737.52	0.106	+			50	AAAPKATPV	9	52	413.2450693638244	824.4755857944489	2	413.2449035644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AAAPKATPV_	ENSG00000130479|ENST00000324096|MAP1S;nc|ENSG00000130479|Q66K74-2|MAP1S	47.657333605630114	0.33044192980041115	4				NaN	NaN	0	NaN	3660	2637	6296
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6300	19.758	NaN	6467.8	30	0	1272.8	0.106	+			8690	EEAGGRPAM	9	56	459.2105419996792	916.4065310661584	2	459.21063232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EEAGGRPAM_	ENSG00000153187|ENST00000640218|HNRNPU;ENST00000476241.2_2_1:245025757-245027609:-|nuORF;nc|ENSG00000153187|Q00839-2|HNRNPU	138.24224950522367	0.011304696901763419	4				NaN	NaN	0	NaN	3661	2637	6296
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6301	19.76	NaN	2625.8	30	0	235.34	0.106	+			32468	QVLTSKAAI	9	62	465.78426722802953	929.5539815228591	2	465.78424072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QVLTSKAAI_	ENSG00000125844|ENST00000377813|RRBP1;nc|ENSG00000125844|Q9P2E9-3|RRBP1;RRBP1|p.A628Gfs*69|1|0.35|ENSG00000125844|chr20:17621915-17621916|-/T|frameshift_variant	62.107414245175825	0.1960472003779324	4				NaN	NaN	0	NaN	3662	2637	6296
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6302	19.762	NaN	1063.3	30	0	129.57	0.035			+	20625	KGFPVFDKC	9	56	520.7648222983651	NaN	0	520.7633666992188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KGFPVFDKC_	REV__ENSG00000088836|ENST00000642402|SLC4A11;REV__nc|ENSG00000088836|Q8NBS3-1|SLC4A11;REV__nc|ENSG00000088836|Q8NBS3-4|SLC4A11;REV__nc|ENSG00000088836|Q8NBS3-5|SLC4A11;REV__SLC4A11|p.F477Sfs*7|1|0.26|ENSG00000088836|chr20:3230548-3230548|A/-|frameshift_variant	45.97224482568171	0.23445038899310136	4				NaN	NaN	0	NaN	3663	2637	6296
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6303	19.763	NaN	3498.1	30	0	738.79	0.145				-1	AELVYMLESK	10	46	400.2065238431346	1197.5977421296038	3	400.2057800292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_AELVYM(Oxidation (M))LESK_	ENSG00000166912|ENST00000435680|MTMR10;ENST00000565728.5_1_15:31239263-31253097:-|nuORF;ENST00000567567.5_1_15:31233675-31258111:-|nuORF;ENST00000568547.5_1_15:31233444-31253097:-|nuORF;ENST00000568604.5_1_15:31235080-31253097:-|nuORF;MTMR10|p.F552Sfs*19|1|0.26|ENSG00000166912|chr15:30942966-30942966|A/-|frameshift_variant;MTMR10|p.L761*|1|0.4|ENSG00000166912|chr15:30941522-30941522|A/-|frameshift_variant;MTMR10|p.S561*|1|0.05|ENSG00000166912|chr15:30942941-30942942|-/AT|frameshift_variant;nc|ENSG00000166912|Q9NXD2-2|MTMR10	35.15202426646627	0.5927656479315102	4				NaN	NaN	0	NaN	3664	2637	6296
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6321	19.802	NaN	165500	30	0	45021	0.214	+			14667	GTIEKSKLITK	11	122	406.5868265444422	1216.7386502335266	3	406.5867919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTIEKSKLITK_	ENSG00000144426|ENST00000683969|NBEAL1;NBEAL1|p.A1274Qfs*17|1|0.1|ENSG00000144426|chr2:203135766-203135766|A/-|frameshift_variant;NBEAL1|p.F1670Lfs*25|1|0.21|ENSG00000144426|chr2:203144843-203144843|T/-|frameshift_variant;NBEAL1|p.F2315Lfs*2|1|0.17|ENSG00000144426|chr2:203193900-203193900|T/-|frameshift_variant;NBEAL1|p.K2562Rfs*15|1|0.41|ENSG00000144426|chr2:203209306-203209306|A/-|frameshift_variant;NBEAL1|p.N2072Kfs*10|1|0.35|ENSG00000144426|chr2:203172825-203172826|-/A|frameshift_variant;NBEAL1|p.T1311Nfs*3|1|0.08|ENSG00000144426|chr2:203135875-203135876|-/A|frameshift_variant;nc|ENSG00000144426|Q6ZS30-1|NBEAL1;nc|ENSG00000144426|Q6ZS30|NBEAL1	123.61838826891271	0.013225395544318664	4				NaN	NaN	0	NaN	3679	2640	6320
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6322	19.806	NaN	23952	30	0	13166	0.106	+			41763	SVSNMVHTAK	10	60	358.51840397205694	NaN	0	358.5184020996094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVSNMVHTAK_	ENSG00000115839|ENST00000264158|RAB3GAP1;nc|ENSG00000115839|Q15042-3|RAB3GAP1;nc|ENSG00000115839|Q15042-4|RAB3GAP1	60.1669710687717	0.23291468416755162	4				NaN	NaN	0	NaN	3680	2640	6320
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6323	19.808	NaN	5769.1	30	0	2655.7	0.106	+			14389	GTAKSQFLK	9	58	490.2807860218113	NaN	0	490.2818603515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTAKSQFLK_	ENSG00000073111|ENST00000265056|MCM2;ENST00000474964.5_1_3:127323572-127340613:+|nuORF;ENST00000477668.5_1_3:127323572-127337961:+|nuORF	88.17693792209575	0.04527150213038833	4				NaN	NaN	0	NaN	3681	2640	6320
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6324	19.809	NaN	3506	30	0	221.86	0.106	+			433	AAVDAGMAM	9	60	434.6803948038543	867.3462366745086	2	434.7296142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Oxidation (M)	_AAVDAGM(Oxidation (M))AM(Oxidation (M))_	ENSG00000011304|ENST00000356948|PTBP1;ENST00000586944.5_1_19:797434-805231:+|nuORF;nc|ENSG00000011304|P26599-1|PTBP1;nc|ENSG00000011304|P26599-2|PTBP1	65.80317337860623	0.1652391959156183	4				NaN	NaN	0	NaN	3682	2640	6320
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6325	19.811	NaN	6223.8	30	0	2098.4	0.106			+	18168	ILRRKIDLR	9	48	394.9312274110632	1181.7718528333896	3	394.9312438964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ILRRKIDLR_	REV__ENSG00000128708|ENST00000264108|HAT1;REV__ENST00000457761.6_1_2:172821936-172844354:+|nuORF;REV__nc|ENSG00000128708|O14929-2|HAT1	25.57405402267927	0.5642445186134241	4				NaN	NaN	0	NaN	3683	2640	6320
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6326	19.813	NaN	1279.6	30	0	292.15	0.035				-1	KTIMKQIN	8	61	496.28375244140625	NaN	0	496.28375244140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_KTIM(Oxidation (M))KQIN_	CTBS|p.I336Pfs*5|1|0.06|ENSG00000117151|chr1:84555151-84555152|-/GTGGG|frameshift_variant;ENSG00000117151|ENST00000370630|CTBS	38.80614096846853	1.7418937515398478	4				NaN	NaN	0	NaN	3684	2640	6320
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6327	19.814	NaN	3398.3	30	0	967.27	0.139	+			44175	TQTPRPLR	8	56	484.7851941696108	967.5558354060216	2	484.7851867675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TQTPRPLR_	ENST00000588952.5_1_19:10341886-10341940:-|nuORF	19.996771675451527	0.7998311754834225	4				NaN	NaN	0	NaN	3685	2640	6320
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6345	19.853	NaN	27534	30	0	3350.9	0.214				-1	 	0	76	470.7820916401435	939.549630347087	2	470.7820129394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3700	2643	6344
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6346	19.856	NaN	9907.8	30	0	1374.2	0.106	+			39244	STAKSQFLK	9	72	505.2873061483904	1008.5600593635809	2	505.2873229980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STAKSQFLK_	ENSG00000076003|ENST00000264156|MCM6;ENST00000492091.1_1_2:136609063-136622601:-|nuORF;MCM6|p.R771Efs*3|1|0.33|ENSG00000076003|chr2:135844583-135844583|T/-|frameshift_variant	131.61620852596164	0.014413238321579053	4				NaN	NaN	0	NaN	3701	2643	6344
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6347	19.859	NaN	2891.2	30	0	361.72	0.106	+			15944	HAFGGNKASY	10	66	526.2511875404575	1050.487822147715	2	526.2517700195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HAFGGNKASY_	ENSG00000067596|ENST00000262415|DHX8;ENST00000587044.1_1_17:41568567-41594747:+|nuORF	118.74307786436346	0.029104951601466193	4				NaN	NaN	0	NaN	3702	2643	6344
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6348	19.86	NaN	2914.2	30	0	939.63	0.106	+			19639	KDKIRVPE	8	57	492.79483354182884	983.5751141504577	2	492.7952880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KDKIRVPE_	tr|U7SUU5|U7SUU5_FUSNUPhosphoribosylformylglycinamidinecyclo-ligaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=purMPE=3SV=1	60.97194046774394	0.49215940876911696	4				NaN	NaN	0	NaN	3703	2643	6344
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6349	19.862	NaN	2725.4	30	0	409.31	0.106			+	38961	SSREPPLP	8	48	441.73753834150733	881.4605237498147	2	441.73748779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSREPPLP_	REV__ENSG00000178409|ENST00000369042|BEND3	37.15910966729921	0.6739408393984688	4				NaN	NaN	0	NaN	3704	2643	6344
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6350	19.864	NaN	985	30	0	209.4	0.035	+			24390	LFVPNILAR	9	49	521.8259887695312	NaN	0	521.8259887695312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LFVPNILAR_	ENDOG|p.A286V|1|0.42|ENSG00000167136|chr9:128822573-128822573|C/T|missense_variant;ENSG00000167136|ENST00000372642|ENDOG	38.80614096846853	0.28164298475537564	4				NaN	NaN	0	NaN	3705	2643	6344
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6351	19.865	NaN	2628	30	0	362.68	0.141			+	13652	GMVEILGINE	10	65	537.7809367390292	1073.5473205448584	2	537.7814331054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GMVEILGINE_	REV__tr|U7SZZ9|U7SZZ9_FUSNUGalactose-1-phosphateuridylyltransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=galTPE=3SV=1	54.776311868738084	0.41334902933431344	4				NaN	NaN	0	NaN	3706	2643	6344
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6369	19.904	NaN	25572	30	0	4579.7	0.214				-1	 	0	81	540.7691567683639	1079.5237606035278	2	540.7699584960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3721	2646	6368
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6370	19.907	NaN	14520	30	0	1595.7	0.106				-1	 	0	77	471.2202841077283	940.4260152822566	2	471.22027587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3722	2646	6368
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6371	19.909	NaN	33285	30	0	9331.6	0.106			+	7499	DGKLVRELYLQ	11	109	445.25385374805523	1332.7397318443657	3	445.2538146972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DGKLVRELYLQ_	REV__ENSG00000138071|ENST00000260641|ACTR2;REV__nc|ENSG00000138071|P61160-2|ACTR2	35.17822180527639	0.6208003396870814	4				NaN	NaN	0	NaN	3723	2646	6368
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6372	19.911	NaN	10901	30	0	1953.3	0.106	+			47578	VRLQKGASLQ	10	63	367.2241090452565	1098.6504977359696	3	367.22418212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VRLQKGASLQ_	ENSG00000085552|ENST00000368094|IGSF9;ENST00000476102.1_1_1:159900586-159913268:-|nuORF;IGSF9|p.D822Ifs*33|2|0.32|ENSG00000085552|chr1:159928924-159928924|C/-|frameshift_variant;IGSF9|p.P351Hfs*30|1|0.34|ENSG00000085552|chr1:159934242-159934242|G/-|frameshift_variant;IGSF9|p.P909Lfs*19|1|0.52|ENSG00000085552|chr1:159928662-159928662|G/-|frameshift_variant;IGSF9|p.V341*|1|0.31|ENSG00000085552|chr1:159934273-159934273|C/-|frameshift_variant;IGSF9|p.V639Yfs*114|1|0.36|ENSG00000085552|chr1:159930338-159930338|C/-|frameshift_variant;nc|ENSG00000085552|Q9P2J2-2|IGSF9	79.48907831485694	0.19979514868675113	4				NaN	NaN	0	NaN	3724	2646	6368
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6373	19.913	NaN	6275.7	30	0	1685.4	0.106	+			39946	STMGYMAAK	9	67	488.2167944766831	974.4190360201662	2	488.2170715332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_STM(Oxidation (M))GYMAAK_	ENSG00000080824|ENST00000216281|HSP90AA1;ENST00000436135.1_1_1:158495283-158495625:+|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1	108.08749611321984	0.03094949498378333	4				NaN	NaN	0	NaN	3725	2646	6368
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6374	19.915	NaN	3499.4	30	0	1013.6	0.106	+			15055	GTNSVICSK	9	58	454.72866715063316	907.4427813680663	2	454.7285461425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTNSVICSK_	ENSG00000102738|ENST00000323563|MRPS31	89.02883481214508	0.06760336634167786	4				NaN	NaN	0	NaN	3726	2646	6368
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6375	19.917	NaN	20021	30	0	5156.2	0.039	+			17110	HSIDGRVVEPK	11	73	412.89447928269067	1235.661608448272	3	412.8945617675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HSIDGRVVEPK_	ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1	61.76455937419982	0.30770400073182314	4				NaN	NaN	0	NaN	3727	2646	6368
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6393	19.954	NaN	22202	30	0	7485.7	0.215	+			4965	ATQTSVVVK	9	67	466.7738656409469	931.5331783486938	2	466.77386474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATQTSVVVK_	ENSG00000158636|ENST00000695367|EMSY;ENST00000531641.1_1_11:76237526-76255878:+|nuORF;nc|ENSG00000158636|Q7Z589-2|EMSY;nc|ENSG00000158636|Q7Z589-4|EMSY;nc|ENSG00000158636|Q7Z589-5|EMSY;nc|ENSG00000158636|Q7Z589-6|EMSY;nc|ENSG00000158636|Q7Z589|EMSY	199.70438780651162	3.456851077920069E-05	4				NaN	NaN	0	NaN	3742	2649	6392
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6394	19.958	NaN	5349.2	30	0	1014.5	0.106	+			3354	ASNFKSPVK	9	65	489.2741293113107	976.5337056894214	2	489.2740173339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASNFKSPVK_	ENSG00000204435|ENST00000375882|CSNK2B	66.96192283764107	0.15557981141143568	4				NaN	NaN	0	NaN	3743	2649	6392
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6395	19.96	NaN	5786.7	30	0	2824.5	0.106	+			1866	AILEKRSKL	9	46	353.22885740780913	1056.6647428236274	3	353.2289123535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AILEKRSKL_	DCDC1|p.F176Lfs*20|1|0.2|ENSG00000170959|chr11:30920862-30920862|A/-|frameshift_variant	44.377184641726394	0.36891676396732553	4				NaN	NaN	0	NaN	3744	2649	6392
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6396	19.962	NaN	6638.8	30	0	1352.1	0.106			+	35703	SDKSSFDK	8	60	457.21627063486073	912.4179883365215	2	457.2163391113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SDKSSFDK_	REV__ENSG00000133958|ENST00000695012|UNC79;REV__nc|ENSG00000133958|Q9P2D8-2|UNC79;REV__nc|ENSG00000133958|Q9P2D8-3|UNC79;REV__nc|ENSG00000133958|Q9P2D8|UNC79;REV__UNC79|p.E1772Rfs*6|1|0.14|ENSG00000133958|chr14:93622543-93622543|G/-|frameshift_variant;REV__UNC79|p.F2181Lfs*10|2|0.33|ENSG00000133958|chr14:93655372-93655372|T/-|frameshift_variant;REV__UNC79|p.H1937Pfs*2|1|0.36|ENSG00000133958|chr14:93634607-93634608|-/C|frameshift_variant	79.45101966838831	0.3281480470254892	4				NaN	NaN	0	NaN	3745	2649	6392
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6397	19.964	NaN	4805	30	0	1590.3	0.106	+			44650	TTGAVLGQK	9	60	437.75304274016236	873.4915325471247	2	437.7528381347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TTGAVLGQK_	chr3:58640177-58645509|101|32.06|0.87|5.2|-|2|FAM3D,FAM3D|2;ENSG00000198643|ENST00000358781|FAM3D;FAM3D|p.G139Vfs*16|1|0.28|ENSG00000198643|chr3:58637183-58637183|C/-|frameshift_variant	116.90359126533652	0.02307425081617795	4				NaN	NaN	0	NaN	3746	2649	6392
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6398	19.966	NaN	8290.9	30	0	2958.1	0.035	+			47650	VSCPVGIKK	9	55	329.8596904964455	986.5572420895367	3	329.85986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_VSC(Carbamidomethyl (C))PVGIKK_	ENSG00000175806|ENST00000317173|MSRA;nc|ENSG00000175806|Q9UJ68-2|MSRA;nc|ENSG00000175806|Q9UJ68-3|MSRA;nc|ENSG00000175806|Q9UJ68-4|MSRA;nc|ENSG00000175806|Q9UJ68-5|MSRA	60.11826168202944	0.21262886028301267	4				NaN	NaN	0	NaN	3747	2649	6392
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6399	19.966	NaN	568.55	30	0	79.672	0.141	+			34482	RVDDHLMGK	9	40	535.774658203125	NaN	0	535.774658203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RVDDHLMGK_	ENSG00000108848|ENST00000505658|LUC7L3;ENST00000508482.5_1_17:48797176-48828101:+|nuORF;LUC7L3|p.S389Kfs*2|3|0.28|ENSG00000108848|chr17:50750520-50750521|-/A|frameshift_variant;LUC7L3|p.S389Kfs*4|1|0.13|ENSG00000108848|chr17:50750520-50750521|-/AA|frameshift_variant;LUC7L3|p.S389Vfs*3|1|0.27|ENSG00000108848|chr17:50750521-50750521|A/-|frameshift_variant	29.170058357718403	0.3302935627494407	4				NaN	NaN	0	NaN	3748	2649	6392
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6417	20.004	NaN	16936	30	0	7531	0.214	+			49010	VVGPVGAGK	9	49	392.2396255893566	782.4646982455132	2	392.2395935058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVGPVGAGK_	ABCC4|p.L883Wfs*7|2|0.22|ENSG00000125257|chr13:95083178-95083178|A/-|frameshift_variant;ABCC4|p.T775Rfs*21|1|0.09|ENSG00000125257|chr13:95161322-95161323|-/AGTATGTCTT|frameshift_variant;ABCC6|p.L780Wfs*31|1|0.44|ENSG00000091262|chr16:16178875-16178875|G/-|frameshift_variant;ENSG00000091262|ENST00000205557|ABCC6;ENSG00000125257|ENST00000645237|ABCC4;nc|ENSG00000091262|O95255-3|ABCC6;nc|ENSG00000125257|O15439-2|ABCC4;nc|ENSG00000125257|O15439-3|ABCC4;nc|ENSG00000125257|O15439-4|ABCC4	45.9519527083369	0.35044536499095585	4				NaN	NaN	0	NaN	3763	2652	6416
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6418	20.008	NaN	9839.2	30	0	1873.1	0.106	+			38451	SSAPPLTGK	9	66	429.2400503518882	856.4655477705764	2	429.23974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSAPPLTGK_	ENSG00000100105|ENST00000266269|PATZ1;nc|ENSG00000100105|Q9HBE1-2|PATZ1;nc|ENSG00000100105|Q9HBE1-3|PATZ1;nc|ENSG00000100105|Q9HBE1-4|PATZ1;PATZ1|p.G285Pfs*14|1|0.11|ENSG00000100105|chr22:31344749-31344750|CC/-|frameshift_variant	66.96192283764107	0.15557981141143568	4				NaN	NaN	0	NaN	3764	2652	6416
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6419	20.01	NaN	5060	30	0	1821.5	0.106	+			86	AACSQYFKK	9	46	368.1828475043281	1101.5267131131843	3	368.1829833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_AAC(Carbamidomethyl (C))SQYFKK_	ENSG00000178951|ENST00000322357|ZBTB7A	45.97224482568171	0.3502073465782774	4				NaN	NaN	0	NaN	3765	2652	6416
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6420	20.012	NaN	8724.7	30	0	980.4	0.106	+			15938	HAFESSQKY	9	67	548.7565477064667	1095.4985424797333	2	548.7569580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HAFESSQKY_	ENSG00000100027|ENST00000339468|YPEL1;ENSG00000175155|ENST00000312655|YPEL2;ENST00000477675.1_1_22:22055420-22058252:-|nuORF;YPEL1|p.E102A|1|0.07|ENSG00000100027|chr22:21701184-21701184|T/G|missense_variant	180.92599232761785	0.0012030822705978085	4				NaN	NaN	0	NaN	3766	2652	6416
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6421	20.014	NaN	5499.1	30	0	635.22	0.106			+	30730	QDKVRLNK	8	71	500.79818345227426	999.5818139713485	2	500.7981262207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QDKVRLNK_	REV__ENSG00000124126|ENST00000371941|PREX1;REV__ENST00000482556.5_1_20:47242425-47249020:-|nuORF;REV__nc|ENSG00000124126|Q8TCU6-2|PREX1	70.8162118820467	0.40009732720503505	4				NaN	NaN	0	NaN	3767	2652	6416
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6422	20.015	NaN	1517.5	30	0	274.01	0.042	+			30326	PTRYGVVLG	9	53	481.27806065517956	960.5415683771591	2	481.9554748535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PTRYGVVLG_	ENSG00000158887|ENST00000533357|MPZ;nc|ENSG00000158887|P25189-2|MPZ	20.481830146152948	0.6112419832031293	4				NaN	NaN	0	NaN	3768	2652	6416
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6423	20.016	NaN	7489.8	30	0	2842.1	0.143	+			15423	GTYQDRLTK	9	42	361.1925250298848	1080.5557456898543	3	361.19244384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GTYQDRLTK_	ENSG00000164758|ENST00000297347|MED30;ENST00000519879.1_1_8:118533115-118541135:+|nuORF;nc|ENSG00000164758|Q96HR3-2|MED30	44.377184641726394	0.36891676396732553	4				NaN	NaN	0	NaN	3769	2652	6416
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6441	20.056	NaN	24965	30	0	13901	0.215	+			42520	TAPTGHTL	8	43	399.2110951379025	796.407637342605	2	399.2110900878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAPTGHTL_	ENSG00000198356|ENST00000357332|GET3	55.50420428727701	0.5462892107279674	4				NaN	NaN	0	NaN	3784	2655	6440
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6442	20.059	NaN	7426.8	30	0	3532.4	0.106	+			22196	KSTELLIRK	9	47	363.2324257024919	1086.6754477076759	3	363.2325439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KSTELLIRK_	ENSG00000132475|ENST00000254810|H3-3B;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000168148|ENST00000366696|H3-4;ENSG00000183598|ENST00000331491|H3C13;ENSG00000188375|ENST00000340398|H3-5;ENSG00000197153|ENST00000359303|H3C12;ENSG00000197409|ENST00000356476|H3C4;ENSG00000203811|ENST00000369158|H3C14;ENSG00000203852|ENST00000403683|H3C15;ENSG00000273983|ENST00000614378|H3C8;ENSG00000274750|ENST00000614911|H3C6;ENSG00000275379|ENST00000616365|H3C11;ENSG00000275714|ENST00000613854|H3C1;ENSG00000277775|ENST00000618052|H3C7;ENSG00000278828|ENST00000685041|H3C10;ENST00000401004.2_1:120904811-120905087:+|nuORF;ENST00000586518.1_1_17:73774674-73775034:-|nuORF;nc|ENSG00000273213|Q5TEC6|H3-7	54.776311868738084	0.25715957988447635	4				NaN	NaN	0	NaN	3785	2655	6440
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6443	20.061	NaN	62716	30	0	9596.5	0.106				-1	 	0	90	610.2722676378563	1827.7949735137688	3	610.2734985351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3786	2655	6440
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6444	20.063	NaN	2283.7	30	0	1284.9	0.106			+	11977	FVNVKASVQ	9	28	331.1916198730469	NaN	0	331.1916198730469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FVNVKASVQ_	REV__ENSG00000143669|ENST00000389793|LYST;REV__ENST00000465349.5_1_1:235954948-235996891:-|nuORF;REV__ENST00000489585.5_1_1:235926109-235996891:-|nuORF;REV__LYST|p.E1851Dfs*2|1|0.15|ENSG00000143669|chr1:235774994-235774994|T/-|frameshift_variant;REV__LYST|p.F2078Lfs*38|1|0.35|ENSG00000143669|chr1:235762739-235762739|A/-|frameshift_variant;REV__LYST|p.N305Kfs*36|1|0.4|ENSG00000143669|chr1:235809903-235809904|-/T|frameshift_variant;REV__LYST|p.V337Sfs*4|1|0.12|ENSG00000143669|chr1:235809809-235809810|-/T|frameshift_variant;REV__nc|ENSG00000143669|Q99698-2|LYST;REV__nc|ENSG00000143669|Q99698-3|LYST	23.04248740728303	0.3589936788096251	4				NaN	NaN	0	NaN	3787	2655	6440
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6445	20.065	NaN	6149.6	30	0	1523.7	0.106	+			42801	TEAPLNPK	8	61	435.24011356948506	868.4656742057701	2	435.2398376464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TEAPLNPK_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000403258.1_1_6:88986231-88986483:-|nuORF;ENST00000446382.2_1_9:6834760-6835018:+|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000502306.1_1_5:15450853-15451165:+|nuORF;ENST00000567299.1_1_19:9629420-9629708:+|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;nc|ENSG00000204434|Q9BYX7|POTEKP	55.50420428727701	0.5462892107279674	4				NaN	NaN	0	NaN	3788	2655	6440
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6446	20.067	NaN	1656.9	30	0	593.83	0.037	+			9506	EKVFEKLLQ	9	44	378.5580564548101	NaN	0	378.55810546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EKVFEKLLQ_	tr|U7SUB8|U7SUB8_FUSNU5-formyltetrahydrofolatecyclo-ligaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01094PE=3SV=1	52.936696900407355	0.1864545979552969	4				NaN	NaN	0	NaN	3789	2655	6440
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6447	20.067	NaN	14568	30	0	4050.6	0.142	+			34269	RTIQTFVKK	9	86	374.2325598849153	1119.675850254946	3	374.2326965332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RTIQTFVKK_	ENSG00000040633|ENST00000320316|PHF23;nc|ENSG00000040633|Q9BUL5-2|PHF23;nc|ENSG00000040633|Q9BUL5-4|PHF23;PHF23|p.D230Ifs*37|1|0.2|ENSG00000040633|chr17:7236239-7236239|C/-|frameshift_variant;PHF23|p.P112Qfs*20|1|0.43|ENSG00000040633|chr17:7236592-7236592|G/-|frameshift_variant;PHF23|p.P161Lfs*63|1|0.55|ENSG00000040633|chr17:7236445-7236445|G/-|frameshift_variant;PHF23|p.S243Vfs*24|2|0.23|ENSG00000040633|chr17:7236201-7236201|G/-|frameshift_variant	81.52500206392136	0.09095445986635249	4				NaN	NaN	0	NaN	3790	2655	6440
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6465	20.106	NaN	136510	30	0	41705	0.179	+			39601	STHGTFLNK	9	110	502.76161220443834	1003.5086714756767	2	502.7616882324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STHGTFLNK_	ENSG00000163798|ENST00000326019|SLC4A1AP;nc|ENSG00000163798|Q9BWU0-1|SLC4A1AP;SLC4A1AP|p.F378Lfs*8|1|0.18|ENSG00000163798|chr2:27667375-27667375|T/-|frameshift_variant;SLC4A1AP|p.L669Tfs*8|1|0.38|ENSG00000163798|chr2:27685159-27685160|-/A|frameshift_variant	176.08678752253132	0.0017279326439731339	4				NaN	NaN	0	NaN	3805	2658	6464
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6466	20.109	NaN	105510	30	0	31876	0.106	+			14917	GTMAMLIVGI	10	66	341.1854888439512	1020.5346371320536	3	341.1856384277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_GTM(Oxidation (M))AMLIVGI_	ENST00000222547.7_1_7:93628507-93628591:-|nuORF	45.97224482568171	0.49411383603842696	4				NaN	NaN	0	NaN	3806	2658	6464
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6467	20.111	NaN	12039	30	0	3548.7	0.106			+	18563	ISNQPIPE	8	61	449.2373404092987	896.4601278853975	2	449.2370910644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ISNQPIPE_	REV__ENSG00000174130|ENST00000508254|TLR6;REV__nc|ENSG00000174130|Q9Y2C9-2|TLR6	63.30626980617807	0.4690498839812213	4				NaN	NaN	0	NaN	3807	2658	6464
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6468	20.112	NaN	6215.7	30	0	1021.9	0.106	+			1688	AGTLARFQ	8	69	432.24053061014314	862.4665082870863	2	432.2402038574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AGTLARFQ_	ENST00000583631.1_1_17:26890919-26898285:-|nuORF	63.30626980617807	0.4690498839812213	4				NaN	NaN	0	NaN	3808	2658	6464
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6469	20.114	NaN	5352.1	30	0	3110.8	0.106			+	36216	SELSDLGVLA	10	39	335.18242427438355	NaN	0	335.18206787109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SELSDLGVLA_	REV__ENSG00000175928|ENST00000319331|LRRN1	30.503639358989545	0.4000169810673414	4				NaN	NaN	0	NaN	3809	2658	6464
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6470	20.116	NaN	5723.8	30	0	630.25	0.106	+			36527	SFENVRAK	8	67	475.7561231524361	949.4976933716722	2	475.7560729980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SFENVRAK_	ENSG00000136238|ENST00000348035|RAC1;ENSG00000169750|ENST00000306897|RAC3;ENST00000488373.5_1_7:6415539-6442074:+|nuORF;nc|ENSG00000136238|P63000-2|RAC1	74.25504064058377	0.37144338840759816	4				NaN	NaN	0	NaN	3810	2658	6464
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6471	20.118	NaN	5150.7	30	0	1140.7	0.038			+	34668	RVRWSLNRK	9	70	607.8655504339123	1213.7165479346245	2	607.8666381835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RVRWSLNRK_	REV__ENSG00000198598|ENST00000360564|MMP17;REV__MMP17|p.D221Tfs*36|1|0.5|ENSG00000198598|chr12:131840808-131840808|G/-|frameshift_variant;REV__nc|ENSG00000198598|Q9ULZ9-2|MMP17	47.95952297671804	0.32689736945648856	4				NaN	NaN	0	NaN	3811	2658	6464
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6489	20.155	NaN	52718	30	0	10629	0.215	+			27631	MPQGGGQHY	9	92	487.710673826026	973.406794718852	2	487.7108154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MPQGGGQHY_	ENSG00000141380|ENST00000415083|SS18;nc|ENSG00000141380|Q15532-2|SS18	120.62098272573253	0.020823834273767324	4				NaN	NaN	0	NaN	3826	2661	6488
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6490	20.158	NaN	2968.6	30	0	1287.1	0.106	+			22456	KTLGPILKK	9	45	333.2303483722338	996.6692157169014	3	333.2304382324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTLGPILKK_	ENSG00000006652|ENST00000403825|IFRD1;ENST00000466459.5_1_7:112097053-112108063:+|nuORF;nc|ENSG00000288640|O00458-2|IFRD1	98.58198989935565	0.04066992115528678	4				NaN	NaN	0	NaN	3827	2661	6488
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6491	20.16	NaN	3351	30	0	323.15	0.106	+			28298	NEDGSRTAL	9	63	481.73043319664066	961.4463134600813	2	481.73046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NEDGSRTAL_	ENSG00000068654|ENST00000263857|POLR1A	68.84614121027924	0.14577793175421136	4				NaN	NaN	0	NaN	3828	2661	6488
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6492	20.162	NaN	4308.5	30	0	1177.9	0.106	+			40971	SVGGSTALR	9	56	424.2352799277097	846.4560069222194	2	424.235107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVGGSTALR_	ENSG00000019102|ENST00000326621|VSIG2;nc|ENSG00000019102|Q96IQ7-2|VSIG2	82.7504851949679	0.08565546331141553	4				NaN	NaN	0	NaN	3829	2661	6488
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6493	20.164	NaN	4137.5	30	0	841.07	0.106				-1	SCCPVGCAK	9	53	462.68942719083105	923.3643014484621	2	462.69024658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_SCC(Carbamidomethyl (C))PVGCAK_	CON__P67983;ENSG00000125144|ENST00000379811|MT1G;ENSG00000125148|ENST00000245185|MT2A;ENSG00000169688|ENST00000334346|MT1B;ENSG00000187193|ENST00000394485|MT1X;ENSG00000205364|ENST00000379818|MT1M;ENST00000330439.6_1_16:56660742-56660880:+|nuORF;ENST00000562017.1_1_16:56643131-56643263:+|nuORF;ENST00000563985.1_1_16:56642884-56643263:+|nuORF;ENST00000567300.1_1_16:56642646-56643263:+|nuORF;nc|ENSG00000125144|P13640-2|MT1G;nc|ENSG00000169715|P04732|MT1E	35.61828744233558	0.47037581924408073	4				NaN	NaN	0	NaN	3830	2661	6488
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6494	20.166	NaN	4322.1	30	0	1624.7	0.038			+	-1	ASRMLSTTVIG	11	42	384.54135984024765	1150.602250120943	3	384.5414733886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_ASRM(Oxidation (M))LSTTVIG_	REV__ENST00000450006.7_1_8:21957330-21958249:+|nuORF	29.550750289552195	0.6798279264880025	4				NaN	NaN	0	NaN	3831	2661	6488
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6495	20.166	NaN	8481.5	30	0	860.69	0.143	+			34527	RVHEVFRVGK	10	69	409.57524690556403	1225.7039113168921	3	409.5752868652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RVHEVFRVGK_	ENST00000393094.6_1_11:107879697-107879871:+|nuORF	105.16503226865211	0.06235809640390954	4				NaN	NaN	0	NaN	3832	2661	6488
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6513	20.206	NaN	95380	30	0	37657	0.214	+			3942	ATATELTTK	9	83	468.2556718073749	934.4967906815498	2	468.2556457519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATATELTTK_	ENSG00000133606|ENST00000255977|MKRN1;ENST00000475010.5_1_7:140155450-140179030:-|nuORF;nc|ENSG00000133606|Q9UHC7-2|MKRN1;nc|ENSG00000133606|Q9UHC7-3|MKRN1;nc|ENSG00000133606|Q9UHC7-4|MKRN1;nc|ENSG00000238222|Q13434|MKRN4P	172.24860141594272	0.002383092361811508	4				NaN	NaN	0	NaN	3847	2664	6512
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6514	20.209	NaN	5924.9	30	0	1529.5	0.106	+			48613	VTSAVNVAK	9	67	444.7608894469504	NaN	0	444.7608947753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTSAVNVAK_	ENSG00000167676|ENST00000301286|PLIN4;ENSG00000167676|ENST00000301286|PLIN4;ENSG00000167676|ENST00000301286|PLIN4;PLIN4|p.A561Qfs*13|1|0.1|ENSG00000167676|chr19:4512237-4512237|C/-|frameshift_variant;PLIN4|p.G1001Afs*9|1|0.16|ENSG00000167676|chr19:4510916-4510916|C/-|frameshift_variant;PLIN4|p.G1001Afs*9|1|0.16|ENSG00000167676|chr19:4510916-4510916|C/-|frameshift_variant;PLIN4|p.G1001Afs*9|1|0.16|ENSG00000167676|chr19:4510916-4510916|C/-|frameshift_variant	98.62937762414208	0.024200618960070384	4				NaN	NaN	0	NaN	3848	2664	6512
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6515	20.211	NaN	4783.5	30	0	1117.8	0.106	+			38621	SSGVPNPPK	9	60	441.73753834150733	881.4605237498147	2	441.7375183105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSGVPNPPK_	ENSG00000115207|ENST00000264720|GTF3C2	51.19269402634007	0.2889735674168909	4				NaN	NaN	0	NaN	3849	2664	6512
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6516	20.213	NaN	11374	30	0	4251.9	0.106	+			38164	SQCDAIRVTK	10	51	393.20452996209235	NaN	0	393.20477294921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_SQC(Carbamidomethyl (C))DAIRVTK_	ENSG00000120008|ENST00000263461|WDR11;WDR11|p.L1134Gfs*5|1|0.26|ENSG00000120008|chr10:120905977-120905978|CC/-|frameshift_variant;WDR11|p.Q977Sfs*9|1|0.27|ENSG00000120008|chr10:120903226-120903227|-/T|frameshift_variant;WDR11|p.V841Cfs*15|1|0.07|ENSG00000120008|chr10:120900034-120900034|G/-|frameshift_variant	68.62578634547417	0.1638387020055689	4				NaN	NaN	0	NaN	3850	2664	6512
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6517	20.215	NaN	4730.3	30	0	1825.6	0.106			+	43520	TGSVQKEL	8	54	431.23713050277416	860.4597080723483	2	431.23687744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TGSVQKEL_	REV__sp|P08318|PP150_HCMVALargestructuralphosphoproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL32PE=1SV=1;REV__sp|Q6SW99|PP150_HCMVMTegumentproteinpp150OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL32PE=3SV=1	51.33545320467046	0.5859736979383976	4				NaN	NaN	0	NaN	3851	2664	6512
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6518	20.217	NaN	2328.2	30	0	603.59	0.034	+			8671	EDTSWDFG	8	53	478.6847645996022	955.3549762660044	2	478.685302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EDTSWDFG_	ENSG00000165392|ENST00000298139|WRN;WRN|p.D1302Ifs*7|1|0.24|ENSG00000165392|chr8:31157445-31157445|C/-|frameshift_variant	20.481830146152948	0.8005983782650069	4				NaN	NaN	0	NaN	3852	2664	6512
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6519	20.217	NaN	976.04	30	0	132.37	0.145			+	-1	LSIMTLAI	8	47	439.2575378417969	NaN	0	439.2575378417969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_LSIM(Oxidation (M))TLAI_	REV__MFSD11|p.V178M|1|0.36|ENSG00000092931|chr17:76744357-76744357|G/A|missense_variant	26.79610172149135	1.7418937515398478	4				NaN	NaN	0	NaN	3853	2664	6512
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6537	20.257	NaN	3176.3	30	0	1272.2	0.214				-1	TVIEIMRLS	9	41	359.87026038525164	1076.588951755955	3	359.87054443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_TVIEIM(Oxidation (M))RLS_	ENST00000506956.5_1_4:26321340-26364129:+|nuORF	25.57405402267927	0.5642445186134241	4				NaN	NaN	0	NaN	3868	2667	6536
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6538	20.26	NaN	3029.2	30	0	543.57	0.106	+			35077	SAFKADPKISK	11	61	596.3396272460557	1190.6647015589112	2	596.340087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAFKADPKISK_	ENSG00000120647|ENST00000239830|CCDC77;ENST00000540344.5_1_12:498593-542579:+|nuORF;nc|ENSG00000120647|Q9BR77-2|CCDC77	102.95473732560676	0.05457861179418332	4				NaN	NaN	0	NaN	3869	2667	6536
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6539	20.262	NaN	3497.7	30	0	371.63	0.106			+	19446	KARAKVEL	8	61	457.7924897938965	913.570426654593	2	457.79241943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KARAKVEL_	REV__ENSG00000095564|ENST00000265990|BTAF1	68.484700416344	0.4195245774506064	4				NaN	NaN	0	NaN	3870	2667	6536
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6540	20.264	NaN	1817.8	30	0	1009.8	0.106	+			26518	LTPWKHQR	8	30	355.8692932128906	NaN	0	355.8692932128906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LTPWKHQR_	ENSG00000111554|ENST00000682720|MDM1;ENST00000536997.1_1_12:68715294-68716924:-|nuORF;ENST00000538454.2_1_12:68715078-68716924:-|nuORF;MDM1|p.I618Ffs*46|1|0.39|ENSG00000111554|chr12:68302740-68302740|T/-|frameshift_variant;MDM1|p.W325Gfs*4|1|0.24|ENSG00000111554|chr12:68321379-68321379|A/-|frameshift_variant;nc|ENSG00000111554|Q8TC05-4|MDM1;nc|ENSG00000111554|Q8TC05|MDM1	19.359975847455235	1.7418937515398478	4				NaN	NaN	0	NaN	3871	2667	6536
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6541	20.266	NaN	1944.6	30	0	198.63	0.106	+			32819	RAYGPGLEK	9	63	495.77190087536405	989.5292488175281	2	495.7716979980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RAYGPGLEK_	ENSG00000136068|ENST00000295956|FLNB;FLNB|p.A832Rfs*9|1|0.26|ENSG00000136068|chr3:58111795-58111796|-/C|frameshift_variant;FLNB|p.G1596Vfs*33|1|0.36|ENSG00000136068|chr3:58136090-58136090|G/-|frameshift_variant;nc|ENSG00000136068|O75369-2|FLNB;nc|ENSG00000136068|O75369-3|FLNB;nc|ENSG00000136068|O75369-4|FLNB;nc|ENSG00000136068|O75369-5|FLNB;nc|ENSG00000136068|O75369-6|FLNB;nc|ENSG00000136068|O75369-7|FLNB;nc|ENSG00000136068|O75369-8|FLNB;nc|ENSG00000136068|O75369-9|FLNB	68.84614121027924	0.14577793175421136	4				NaN	NaN	0	NaN	3872	2667	6536
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6542	20.268	NaN	4733.9	30	0	689.96	0.106				-1	TGIVMPVP	8	62	415.22969042686697	828.444827920534	2	415.2297058105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_TGIVM(Oxidation (M))PVP_	ENSG00000132330|ENST00000254663|SCLY;ENST00000482031.5_1_2:238973007-238991399:+|nuORF;nc|ENSG00000132330|Q96I15-2|SCLY	29.841539824830324	0.7289191502596711	4				NaN	NaN	0	NaN	3873	2667	6536
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6543	20.269	NaN	2197.2	30	0	422.78	0.034	+			32457	QVKTETAGP	9	54	465.7480864272665	929.481619921333	2	465.7476806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QVKTETAGP_	ENSG00000100146|ENST00000396884|SOX10;nc|ENSG00000100146|P56693|SOX10	47.657333605630114	0.33044192980041115	4				NaN	NaN	0	NaN	3874	2667	6536
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6561	20.307	NaN	13288	30	0	1368.8	0.214			+	-1	WQGCDRFNSPR	11	74	474.88302202317357	1421.6272366697208	3	474.883056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_WQGC(Carbamidomethyl (C))DRFNSPR_	REV__ENSG00000114248|ENST00000316428|LRRC31;REV__nc|ENSG00000114248|Q6UY01-2|LRRC31	38.714083909724	0.5755383074156426	4				NaN	NaN	0	NaN	3889	2670	6560
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6562	20.311	NaN	15004	30	0	1961	0.106			+	41157	SVKGPSLSQ	9	78	451.7504184129843	901.4862838927686	2	451.75048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVKGPSLSQ_	REV__ENST00000464461.1_1_7:150413703-150416231:+|nuORF	78.26377905018397	0.10505600812668463	4				NaN	NaN	0	NaN	3890	2670	6560
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6563	20.313	NaN	8394.9	30	0	2047.8	0.106	+			48646	VTSQFISKK	9	53	346.5375080638131	1036.5906947916394	3	346.53765869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTSQFISKK_	ENSG00000165458|ENST00000298229|INPPL1;ENST00000535985.1_1_11:71944736-71950103:+|nuORF;INPPL1|p.P976Hfs*155|1|0.31|ENSG00000165458|chr11:72237165-72237165|C/-|frameshift_variant;INPPL1|p.P977Tfs*7|1|0.5|ENSG00000165458|chr11:72237164-72237165|-/C|frameshift_variant;INPPL1|p.R1156Gfs*46|2|0.42|ENSG00000165458|chr11:72237704-72237704|C/-|frameshift_variant;nc|ENSG00000165458|O15357-2|INPPL1	56.632244143249146	0.24168844994051353	4				NaN	NaN	0	NaN	3891	2670	6560
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6564	20.314	NaN	4908.9	30	0	453.22	0.106			+	-1	WKMPLKQISK	10	60	425.5794372558594	NaN	0	425.5794372558594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_WKM(Oxidation (M))PLKQISK_	REV__ENST00000370303.4_1_1:93580250-93580589:+|nuORF	35.17822180527639	0.3846679649904324	4				NaN	NaN	0	NaN	3892	2670	6560
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6565	20.316	NaN	5950.9	30	0	776.1	0.106	+			19807	KEDDPKAAL	9	63	493.7608759854997	985.5071990377994	2	493.7608642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEDDPKAAL_	COPS2|p.F259Lfs*19|1|0.29|ENSG00000166200|chr15:49134047-49134047|A/-|frameshift_variant;COPS2|p.G191Rfs*21|1|0.11|ENSG00000166200|chr15:49134484-49134485|-/T|frameshift_variant;COPS2|p.H176Tfs*7|1|0.14|ENSG00000166200|chr15:49137164-49137165|-/T|frameshift_variant;ENSG00000166200|ENST00000388901|COPS2;ENST00000558545.1_1_15:49431640-49447775:-|nuORF;nc|ENSG00000166200|P61201-2|COPS2	141.52041321563706	0.009766778904176347	4				NaN	NaN	0	NaN	3893	2670	6560
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6566	20.318	NaN	938.88	30	0	117.17	0.035	+			18050	IITEGASILQ	10	46	522.800568439597	NaN	0	522.7734985351562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IITEGASILQ_	PPP3CA|p.R73Q|1|0.3|ENSG00000138814|chr4:101195957-101195957|C/T|missense_variant	51.33545320467046	0.297159550775418	4				NaN	NaN	0	NaN	3894	2670	6560
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6567	20.319	NaN	7207.8	30	0	2654.3	0.141	+			16974	HPQQKVAVY	9	65	535.2926872809524	1068.5708216287046	2	535.293212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HPQQKVAVY_	ENSG00000102871|ENST00000345057|TRADD;ENST00000566104.1_1_16:67189803-67193780:-|nuORF	110.11987700582712	0.028875675806141952	4				NaN	NaN	0	NaN	3895	2670	6560
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6585	20.359	NaN	23887	30	0	3814.4	0.214	+			15351	GTVRIGVAK	9	81	450.78469255336785	899.5548321735357	2	450.7845153808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTVRIGVAK_	ENSG00000107186|ENST00000319217|MPDZ;ENST00000539508.5_1_9:13136054-13190160:-|nuORF;MPDZ|p.K1582Rfs*7|1|0.22|ENSG00000107186|chr9:13125278-13125278|T/-|frameshift_variant;nc|ENSG00000107186|O75970-2|MPDZ;nc|ENSG00000107186|O75970-3|MPDZ;nc|ENSG00000107186|O75970-5|MPDZ	98.58198989935565	0.04066992115528678	4				NaN	NaN	0	NaN	3910	2673	6584
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6586	20.362	NaN	5471	30	0	1057.5	0.106	+			3883	ATAQAVAPPR	10	53	491.27713754904977	980.5397221648996	2	491.27685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATAQAVAPPR_	ENST00000609438.1_1_4:90171359-90228902:-|nuORF	114.8945686534367	0.03454040281423369	4				NaN	NaN	0	NaN	3911	2673	6584
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6587	20.365	NaN	14608	30	0	3987.2	0.106	+			34925	SAAGAAFTK	9	67	412.2189435357229	822.4233341382458	2	412.2188720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAAGAAFTK_	ENSG00000258315|ENST00000439424|C17orf49;ENST00000549857.1_1_17:6918176-6918548:+|nuORF;nc|ENSG00000258315|Q8IXM2-2|BAP18;nc|ENSG00000258315|Q8IXM2-3|BAP18	123.20810148215591	0.019257656778428764	4				NaN	NaN	0	NaN	3912	2673	6584
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6588	20.366	NaN	4983.1	30	0	1188.5	0.106	+			16018	HASESRVAL	9	66	485.25979735762473	968.5050417820495	2	485.25927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HASESRVAL_	ENSG00000107185|ENST00000378078|RGP1;ENST00000496906.1_1_9:35749376-35750743:+|nuORF;RGP1|p.G277Vfs*8|1|0.43|ENSG00000107185|chr9:35752019-35752019|G/-|frameshift_variant	75.04331003522576	0.118981335847003	4				NaN	NaN	0	NaN	3913	2673	6584
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6589	20.368	NaN	9867.3	30	0	1766.5	0.106	+			23000	KVSEFVASK	9	65	497.78187741791567	993.5492019026314	2	497.7818298339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KVSEFVASK_	ABTB1|p.E252Sfs*102|1|0.29|ENSG00000114626|chr3:127677272-127677272|C/-|frameshift_variant;ABTB1|p.P318Qfs*36|2|0.4|ENSG00000114626|chr3:127677762-127677762|C/-|frameshift_variant;ENSG00000114626|ENST00000232744|ABTB1;nc|ENSG00000114626|Q969K4-2|ABTB1;nc|ENSG00000114626|Q969K4-3|ABTB1;nc|ENSG00000114626|Q969K4-4|ABTB1	76.16968421966216	0.11411088698345859	4				NaN	NaN	0	NaN	3914	2673	6584
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6590	20.37	NaN	1209.8	30	0	295.19	0.035	+			28499	NHASLISALS	10	45	506.7751159667969	NaN	0	506.7751159667969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NHASLISALS_	ENSG00000169180|ENST00000304658|XPO6;nc|ENSG00000169180|Q96QU8-2|XPO6;XPO6|p.P1120Lfs*4|1|0.28|ENSG00000169180|chr16:28098557-28098557|G/-|frameshift_variant	21.9598887501803	0.4201028297492154	4				NaN	NaN	0	NaN	3915	2673	6584
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6608	20.406	NaN	79988	30	0	8183.6	0.16	+			27739	MQNMSIHTK	9	105	363.84373263506683	1088.5093685054005	3	363.8440246582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MQNMSIHTK_	CON__H-INV:HIT000292931;CON__P05787;CON__REFSEQ:XP_092267;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	106.68306549817024	0.032382560583716295	4				NaN	NaN	0	NaN	3930	2676	6607
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6609	20.409	NaN	2120.3	30	0	184.99	0.106				-1	AVVFSCCVK	9	54	357.17706298828125	NaN	0	357.17706298828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_AVVFSC(Carbamidomethyl (C))C(Carbamidomethyl (C))VK_	ENST00000389484.7_1_2:142888649-142888757:-|nuORF	39.252832667884924	0.27938773122138094	4				NaN	NaN	0	NaN	3931	2676	6607
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6610	20.411	NaN	3939	30	0	457.98	0.106			+	18429	ISCRDSALA	9	61	468.2341471008518	934.4537412685037	2	468.2341613769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ISCRDSALA_	REV__ENSG00000204394|ENST00000375663|VARS1	40.77816245573522	0.41113185337114944	4				NaN	NaN	0	NaN	3932	2676	6607
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6611	20.413	NaN	3077.1	30	0	367.65	0.106	+			12556	GEGKISKDL	9	66	473.7635008408711	NaN	0	473.7633056640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEGKISKDL_	DDX60L|p.A1208Vfs*33|1|0.16|ENSG00000181381|chr4:168395993-168395994|-/CTTTGACA|frameshift_variant;DDX60L|p.F1291Lfs*11|1|0.38|ENSG00000181381|chr4:168391582-168391582|A/-|frameshift_variant;DDX60L|p.N1040Kfs*4|1|0.03|ENSG00000181381|chr4:168406043-168406044|-/AT|frameshift_variant;DDX60L|p.N1168Tfs*25|2|0.3|ENSG00000181381|chr4:168396113-168396113|T/-|frameshift_variant;DDX60L|p.N1642Mfs*9|1|0.2|ENSG00000181381|chr4:168371615-168371615|T/-|frameshift_variant;DDX60L|p.R1122Efs*29|1|0.05|ENSG00000181381|chr4:168400953-168400953|T/-|frameshift_variant;ENSG00000181381|ENST00000682922|DDX60L;nc|ENSG00000181381|Q5H9U9-2|DDX60L	56.632244143249146	0.1636824227100298	4				NaN	NaN	0	NaN	3933	2676	6607
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6612	20.414	NaN	4561.9	30	0	962.67	0.106			+	14749	GTKERNRQGQ	10	48	391.8741380783015	1172.6005848351044	3	391.874267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTKERNRQGQ_	REV__ENSG00000122042|ENST00000380680|UBL3	21.9598887501803	0.7004979571547932	4				NaN	NaN	0	NaN	3934	2676	6607
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6613	20.416	NaN	899.73	30	0	185.16	0.106	+			42351	TAHIHATEY	9	37	521.7515258789062	NaN	0	521.7515258789062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TAHIHATEY_	ENSG00000122188|ENST00000442561|LAX1;nc|ENSG00000122188|Q8IWV1-2|LAX1;nc|ENSG00000122188|Q8IWV1-3|LAX1	44.116797842482775	0.2472372736944149	4				NaN	NaN	0	NaN	3935	2676	6607
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6614	20.418	NaN	3935.3	30	0	1146.7	0.031			+	26268	LSTGGAIK	8	40	373.7237159663036	745.4328789994072	2	373.7239074707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSTGGAIK_	REV__ENSG00000103067|ENST00000473183|ESRP2;REV__ENST00000566774.1_1_16:68264768-68266536:-|nuORF;REV__nc|ENSG00000103067|Q9H6T0|ESRP2	63.30626980617807	0.4690498839812213	4				NaN	NaN	0	NaN	3936	2676	6607
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6632	20.455	NaN	74780	30	0	28002	0.215	+			35280	SALTDKAIVKK	11	93	391.91145110856235	1172.7125239258871	3	391.9114990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SALTDKAIVKK_	ENSG00000176485|ENST00000415826|PLAAT3;ENST00000394613.3_1_11:63342419-63381578:-|nuORF	89.56079334093651	0.10057263200875313	4				NaN	NaN	0	NaN	3951	2679	6631
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6633	20.459	NaN	12526	30	0	2111	0.106	+			49330	VVSETISSK	9	66	475.26332686045566	948.5121007877113	2	475.2633361816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVSETISSK_	ENSG00000179119|ENST00000336349|SPTY2D1;ENST00000536336.5_1_11:18633859-18655855:-|nuORF;nc|ENSG00000179119|Q68D10-2|SPTY2D1	58.22992032128504	0.22837015374068087	4				NaN	NaN	0	NaN	3952	2679	6631
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6634	20.461	NaN	2627.6	30	0	1096.4	0.106			+	-1	SALTMLGLCL	10	26	360.19257830198836	1077.5559055061651	3	360.1927490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SALTMLGLC(Carbamidomethyl (C))L_	REV__nc|ENSG00000180663|Q9BXE9|VN1R3	29.170058357718403	0.6416167986984785	4				NaN	NaN	0	NaN	3953	2679	6631
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6635	20.463	NaN	3052.8	30	0	863.94	0.106	+			40994	SVGPVSPNR	9	51	456.7483431483893	911.4821333635787	2	456.7481689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVGPVSPNR_	ENSG00000131042|ENST00000314446|LILRB2;LILRB2|p.P428Hfs*35|1|0.41|ENSG00000131042|chr19:54277915-54277915|G/-|frameshift_variant;nc|ENSG00000131042|Q8N423-1|LILRB2;nc|ENSG00000131042|Q8N423-3|LILRB2;nc|ENSG00000131042|Q8N423-4|LILRB2	51.19269402634007	0.2889735674168909	4				NaN	NaN	0	NaN	3954	2679	6631
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6636	20.465	NaN	2535	30	0	1015.9	0.106				-1	AVCSYVVKKF	10	42	400.88734266165517	NaN	0	400.8874206542969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_AVC(Carbamidomethyl (C))SYVVKKF_	tr|U7T475|U7T475_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00370PE=4SV=1	24.519189625965996	0.41966695327750003	4				NaN	NaN	0	NaN	3955	2679	6631
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6637	20.466	NaN	7260.5	30	0	843.45	0.106	+			42641	TAVGSSTRY	9	67	471.23771508028244	940.4608772273649	2	471.2374572753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TAVGSSTRY_	ENSG00000173120|ENST00000529006|KDM2A;ENST00000524657.1_1_11:67020024-67022523:+|nuORF;nc|ENSG00000173120|Q9Y2K7-2|KDM2A;nc|ENSG00000173120|Q9Y2K7-4|KDM2A;nc|ENSG00000173120|Q9Y2K7-5|KDM2A	80.45461616416974	0.09558281504443908	4				NaN	NaN	0	NaN	3956	2679	6631
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6638	20.468	NaN	2281.4	30	0	557.28	0.036	+			32333	QTVADLKHAI	10	48	548.3113480237008	1094.6081431142015	2	548.311767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QTVADLKHAI_	ENSG00000023287|ENST00000025008|RB1CC1;nc|ENSG00000023287|Q8TDY2-2|RB1CC1;RB1CC1|p.F304Lfs*6|1|0.47|ENSG00000023287|chr8:52673935-52673935|A/-|frameshift_variant;RB1CC1|p.K964Sfs*13|1|0.31|ENSG00000023287|chr8:52656938-52656938|T/-|frameshift_variant;RB1CC1|p.L547Ffs*7|1|0.05|ENSG00000023287|chr8:52660644-52660645|-/A|frameshift_variant;RB1CC1|p.L965Afs*4|1|0.35|ENSG00000023287|chr8:52656937-52656938|-/T|frameshift_variant;RB1CC1|p.N872Kfs*2|1|0.31|ENSG00000023287|chr8:52657213-52657214|-/T|frameshift_variant	54.776311868738084	0.41334902933431344	4				NaN	NaN	0	NaN	3957	2679	6631
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6656	20.506	NaN	7979.6	30	0	2488.7	0.214				-1	SLCLRSLQA	9	49	349.8584008379079	1046.5533731139237	3	349.858642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SLC(Carbamidomethyl (C))LRSLQA_	ENSG00000005810|ENST00000544440|MYCBP2;MYCBP2|p.C1064Ifs*31|1|0.09|ENSG00000005810|chr13:77211267-77211279|TTATCAGAAGGCA/-|frameshift_variant;MYCBP2|p.G651Efs*24|1|0.04|ENSG00000005810|chr13:77257781-77257782|-/ATTAGTTTTT|frameshift_variant;MYCBP2|p.K375Sfs*4|1|0.3|ENSG00000005810|chr13:77270014-77270014|T/-|frameshift_variant;MYCBP2|p.N1867Tfs*9|1|0.15|ENSG00000005810|chr13:77171572-77171572|T/-|frameshift_variant;MYCBP2|p.N3049*|1|0.11|ENSG00000005810|chr13:77097894-77097895|TT/-|frameshift_variant;MYCBP2|p.P4047Qfs*26|2|0.35|ENSG00000005810|chr13:77067782-77067782|G/-|frameshift_variant;MYCBP2|p.T1507Ffs*24|1|0.04|ENSG00000005810|chr13:77185189-77185190|-/TTGTAAA|frameshift_variant;MYCBP2|p.T4311Pfs*37|1|0.14|ENSG00000005810|chr13:77059619-77059619|G/-|frameshift_variant;MYCBP2|p.V3749*|1|0.12|ENSG00000005810|chr13:77081486-77081486|C/-|frameshift_variant;nc|ENSG00000005810|O75592-2|MYCBP2	32.81241826257853	0.4965981579233955	4				NaN	NaN	0	NaN	3972	2682	6655
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6657	20.509	NaN	21001	30	0	4796.2	0.106	+			14145	GSMRIFTKK	9	81	356.5388646727531	1066.5947646184593	3	356.53912353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSMRIFTKK_	ENSG00000168883|ENST00000323701|USP39;ENST00000459775.5_1_2:85848673-85875928:+|nuORF;ENST00000493829.5_1_2:85843459-85872221:+|nuORF;nc|ENSG00000168883|Q53GS9-2|USP39;nc|ENSG00000168883|Q53GS9-3|USP39	80.45461616416974	0.09558281504443908	4				NaN	NaN	0	NaN	3973	2682	6655
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6658	20.511	NaN	5861.2	30	0	820.29	0.106			+	34025	RSLCSSLTK	9	72	497.7708280839745	993.527103234749	2	497.7710266113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RSLCSSLTK_	REV__ENST00000313432.5_1_12:110787716-110787863:+|nuORF	106.68306549817024	0.032382560583716295	4				NaN	NaN	0	NaN	3974	2682	6655
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6659	20.513	NaN	16881	30	0	5772.6	0.106	+			5131	ATSSVSALK	9	69	432.2449859892087	862.4754190452174	2	432.24505615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATSSVSALK_	ENSG00000177084|ENST00000320574|POLE;ENST00000539357.1_1_12:133257669-133263919:-|nuORF;POLE|p.A2030Pfs*18|1|0.14|ENSG00000177084|chr12:132632712-132632712|C/-|frameshift_variant;POLE|p.E396Sfs*16|1|0.1|ENSG00000177084|chr12:132675438-132675438|C/-|frameshift_variant;POLE|p.K1170Nfs*49|1|0.15|ENSG00000177084|chr12:132657208-132657208|T/-|frameshift_variant;POLE|p.K325Sfs*19|1|0.27|ENSG00000177084|chr12:132676142-132676142|G/-|frameshift_variant	124.08010499294276	0.018729767491916592	4				NaN	NaN	0	NaN	3975	2682	6655
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6660	20.515	NaN	4976.2	30	0	677.45	0.106	+			27632	MPQGGGQHY	9	69	487.710673826026	973.406794718852	2	487.71099853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MPQGGGQHY_	ENSG00000141380|ENST00000415083|SS18;nc|ENSG00000141380|Q15532-2|SS18	76.84663266511073	0.11118375776443899	4				NaN	NaN	0	NaN	3976	2682	6655
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6661	20.517	NaN	4490.4	30	0	1566.5	0.036	+			16822	HPDRSQPAF	9	58	527.7567704425029	1053.4989879518057	2	527.75732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HPDRSQPAF_	ENSG00000213676|ENST00000375203|ATF6B;ENST00000494022.1_1_6:32065974-32085368:-|nuORF;nc|ENSG00000213676|Q99941-2|ATF6B	74.25504064058377	0.12238981753128622	4				NaN	NaN	0	NaN	3977	2682	6655
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6662	20.517	NaN	2207.3	30	0	661.3	0.139			+	37729	SLTGQSSLY	9	50	478.2402893258603	NaN	0	477.79022216796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SLTGQSSLY_	REV__ENSG00000144749|ENST00000273261|LRIG1;REV__ENSG00000198799|ENST00000361127|LRIG2;REV__ENST00000495037.1_1_3:66430689-66454678:-|nuORF;REV__ENST00000496559.6_1_3:66430689-66456253:-|nuORF;REV__LRIG1|p.H868Qfs*44|1|0.18|ENSG00000144749|chr3:66382276-66382286|TGCTCTCAATG/-|frameshift_variant;REV__nc|ENSG00000144749|Q96JA1-2|LRIG1	24.20275056022122	0.35506675290109213	4				NaN	NaN	0	NaN	3978	2682	6655
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6680	20.555	NaN	56614	30	0	6847.8	0.215	+			34722	RVYGGLTTK	9	101	497.7878948064895	993.561236679779	2	497.7875061035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVYGGLTTK_	ENSG00000170248|ENST00000307296|PDCD6IP;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP	138.06239232086	0.011389075116295402	4				NaN	NaN	0	NaN	3993	2685	6679
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6681	20.559	NaN	34067	30	0	19531	0.106	+			6475	AVYLSTCKDSK	11	76	424.5481624744807	1270.622658023642	3	424.5479736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_AVYLSTC(Carbamidomethyl (C))KDSK_	ENSG00000231925|ENST00000434618|TAPBP;nc|ENSG00000231925|O15533-3|TAPBP;nc|ENSG00000231925|O15533-4|TAPBP	66.96192283764107	0.2613103798769313	4				NaN	NaN	0	NaN	3994	2685	6679
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6682	20.561	NaN	19823	30	0	3258.7	0.106			+	30253	PTAAAAPAAAA	11	85	441.73753834150733	881.4605237498147	2	441.7373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PTAAAAPAAAA_	REV__ENST00000423059.8_2_7:11676563-11871669:-|nuORF	79.45101966838831	0.15694955818820913	4				NaN	NaN	0	NaN	3995	2685	6679
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6683	20.563	NaN	5595.9	30	0	628.17	0.106	+			2032	AKPSGPGVQDC	11	64	529.7508937728003	1057.4872346124005	2	529.7514038085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AKPSGPGVQDC_	ENSG00000275718|ENST00000617897|CCL15	48.601550744091256	0.44024757269956427	4				NaN	NaN	0	NaN	3996	2685	6679
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6684	20.565	NaN	12323	30	0	3380.5	0.106			+	12745	GELALTRP	8	53	428.7480336723594	855.4815144115188	2	428.7477111816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GELALTRP_	REV__ENST00000504670.5_1_3:139108768-139108951:+|nuORF	60.97194046774394	0.49215940876911696	4				NaN	NaN	0	NaN	3997	2685	6679
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6685	20.566	NaN	2011.6	30	0	318.95	0.035			+	22852	KVINKKEE	8	59	494.2951742964437	NaN	0	494.295166015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KVINKKEE_	REV__ENSG00000133640|ENST00000393217|LRRIQ1;REV__ENST00000525971.6_1_12:85431954-85518298:+|nuORF;REV__LRRIQ1|p.I583Dfs*18|1|0.48|ENSG00000133640|chr12:85056533-85056534|-/A|frameshift_variant;REV__LRRIQ1|p.K490Nfs*28|3|0.34|ENSG00000133640|chr12:85056257-85056257|A/-|frameshift_variant;REV__LRRIQ1|p.K699Vfs*30|1|0.1|ENSG00000133640|chr12:85056886-85056887|-/AGTTGTGT|frameshift_variant;REV__nc|ENSG00000133640|Q96JM4-2|LRRIQ1	76.7741389293348	1.7418937515398478	4				NaN	NaN	0	NaN	3998	2685	6679
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6686	20.567	NaN	6372.3	30	0	2378.3	0.138	+			43901	TNGPLPDK	8	59	421.2243149157481	840.4340768982962	2	421.2242736816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TNGPLPDK_	ENSG00000142789|ENST00000290122|CELA3A;ENSG00000219073|ENST00000337107|CELA3B	101.25262130126117	0.2499877059228457	4				NaN	NaN	0	NaN	3999	2685	6679
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6704	20.605	NaN	28389	30	0	3163.4	0.214				-1	 	0	70	565.9153366048877	1694.724180414863	3	565.9163818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4014	2688	6703
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6705	20.609	NaN	6158.4	30	0	2603.9	0.106			+	-1	GMQAAMQGM	9	59	478.6847645996022	955.3549762660044	2	478.68524169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Oxidation (M)	_GMQAAM(Oxidation (M))QGM(Oxidation (M))_	REV__CREBBP|p.Q2411Sfs*2|1|0.24|ENSG00000005339|chr16:3727816-3727816|G/-|frameshift_variant;REV__ENSG00000005339|ENST00000262367|CREBBP;REV__nc|ENSG00000005339|Q92793-2|CREBBP	31.954861631926434	0.5046124803899898	4				NaN	NaN	0	NaN	4015	2688	6703
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6706	20.611	NaN	7406	30	0	581.11	0.106	+			16366	HENDVKTAL	9	74	513.7643466353472	1025.5141403374944	2	513.7649536132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HENDVKTAL_	ENSG00000165533|ENST00000380656|TTC8;nc|ENSG00000165533|Q8TAM2-3|TTC8;TTC8|p.K269Rfs*38|1|0.08|ENSG00000165533|chr14:88857236-88857237|-/GGATGAATAG|frameshift_variant	93.5975768576971	0.05472259948179787	4				NaN	NaN	0	NaN	4016	2688	6703
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6707	20.613	NaN	12164	30	0	1784.9	0.106	+			35241	SALGSSSYK	9	59	450.2269029710386	898.4392530088772	2	450.2270812988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SALGSSSYK_	ENSG00000122965|ENST00000261741|RBM19;RBM19|p.F841Sfs*18|1|0.28|ENSG00000122965|chr12:113915007-113915007|G/-|frameshift_variant	132.757866228626	0.013877640931359021	4				NaN	NaN	0	NaN	4017	2688	6703
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6708	20.615	NaN	4615.3	30	0	777.05	0.106	+			32977	REDTKAAVL	9	64	501.78228197272267	1001.5500110122454	2	501.782470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_REDTKAAVL_	DDX54|p.G702Efs*14|1|0.58|ENSG00000123064|chr12:113163022-113163022|C/-|frameshift_variant;DDX54|p.R734Lfs*97|1|0.27|ENSG00000123064|chr12:113161992-113161992|C/-|frameshift_variant;ENSG00000123064|ENST00000306014|DDX54;nc|ENSG00000123064|Q8TDD1-2|DDX54	49.536043120802724	0.308405419312776	4				NaN	NaN	0	NaN	4018	2688	6703
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6709	20.616	NaN	5269.1	30	0	1742.3	0.035				-1	AYCGPQVGVG	10	47	336.49180307055155	1006.4535798118548	3	336.4920654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_AYC(Carbamidomethyl (C))GPQVGVG_	chr8:127322226-127339281|391|12.11|0.0|20.21|+|ENST00000645438|POU5F1B,POU5F1B;ENSG00000204531|ENST00000259915|POU5F1;ENSG00000212993|ENST00000696633|POU5F1B;POU5F1|p.G321Wfs*21|1|0.32|ENSG00000204531|chr6:31164723-31164724|-/A|frameshift_variant;POU5F1|p.V103Gfs*86|1|0.14|ENSG00000204531|chr6:31170313-31170314|-/C|frameshift_variant;POU5F1B|p.G120Wfs*69|1|0.44|ENSG00000212993|chr8:127416216-127416217|-/C|frameshift_variant	37.81151784470057	0.569310847604193	4				NaN	NaN	0	NaN	4019	2688	6703
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6710	20.617	NaN	3518.3	30	0	2098.8	0.139			+	31256	QHLVLTNGV	9	49	490.7794242877578	979.5442956423157	2	490.77978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QHLVLTNGV_	REV__ENSG00000196659|ENST00000408939|TTC30B;REV__ENSG00000197557|ENST00000355689|TTC30A;REV__TTC30A|p.R237C|1|0.37|ENSG00000197557|chr2:177617993-177617993|G/A|missense_variant;REV__TTC30B|p.R237C|1|0.18|ENSG00000196659|chr2:177552055-177552055|G/A|missense_variant	27.882242232435846	0.5426732730940306	4				NaN	NaN	0	NaN	4020	2688	6703
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6728	20.655	NaN	6843.8	30	0	1417.8	0.215			+	20371	KESSVRLK	8	65	473.78735814237217	945.5601633515444	2	473.78741455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KESSVRLK_	REV__ENSG00000253953|ENST00000519479|PCDHGB4;REV__ENSG00000276547|ENST00000617380|PCDHGB5;REV__nc|ENSG00000253953|Q9UN71-2|PCDHGB4;REV__nc|ENSG00000276547|Q9Y5G0-2|PCDHGB5;REV__PCDHGB5|p.R64Q|1|0.1|ENSG00000276547|chr5:141398318-141398318|G/A|missense_variant	64.20726635412375	0.4601301477144759	4				NaN	NaN	0	NaN	4035	2691	6727
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6729	20.659	NaN	4332.2	30	0	889.14	0.106	+			39928	STMEGGTLK	9	62	462.2285133440408	922.4424737548816	2	462.22845458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STMEGGTLK_	ENSG00000197943|ENST00000564138|PLCG2;ENST00000567980.5_1_16:81819579-81955027:+|nuORF;PLCG2|p.T943Pfs*5|1|0.19|ENSG00000197943|chr16:81934513-81934513|A/-|frameshift_variant	61.691277971877994	0.19951612995419254	4				NaN	NaN	0	NaN	4036	2691	6727
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6730	20.661	NaN	2167	30	0	539.14	0.106	+			44285	TSAMTAASLN	10	54	483.73169265339635	965.4488323735927	2	483.7314147949219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TSAMTAASLN_	ELMO3|p.T760Pfs*31|1|0.22|ENSG00000102890|chr16:67203827-67203827|C/-|frameshift_variant	29.170058357718403	0.6416167986984785	4				NaN	NaN	0	NaN	4037	2691	6727
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6731	20.662	NaN	1991.5	30	0	637.05	0.106			+	36415	SETQLTHT	8	45	458.7216330536836	915.4287131741672	2	458.7215881347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SETQLTHT_	REV__ENSG00000114993|ENST00000272430|RTKN;REV__nc|ENSG00000114993|Q9BST9-2|RTKN;REV__nc|ENSG00000114993|Q9BST9-3|RTKN;REV__RTKN|p.L511Pfs*21|1|0.22|ENSG00000114993|chr2:74426403-74426404|-/G|frameshift_variant	45.9519527083369	0.6193794311207887	4				NaN	NaN	0	NaN	4038	2691	6727
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6732	20.664	NaN	3124.1	30	0	476.35	0.106	+			27655	MPSHPDRAY	9	64	537.245093078328	1072.4756332234558	2	537.24609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MPSHPDRAY_	ENSG00000161955|ENST00000338784|TNFSF13;nc|ENSG00000161955|O75888-2|TNFSF13;nc|ENSG00000161955|O75888-3|TNFSF13;nc|ENSG00000161955|O75888-4|TNFSF13;nc|ENSG00000161955|O75888-5|TNFSF13;nc|ENSG00000239697|O43508-2|TNFSF12	47.657333605630114	0.33044192980041115	4				NaN	NaN	0	NaN	4039	2691	6727
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6733	20.666	NaN	8466.2	30	0	1921.8	0.035			+	18497	ISHITENSI	9	71	507.2665335615322	1012.5185141898644	2	507.2667236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ISHITENSI_	REV__ABCA13|p.A4442Pfs*3|1|0.06|ENSG00000179869|chr7:48506365-48506365|G/-|frameshift_variant;REV__ABCA13|p.K3855Nfs*139|1|0.3|ENSG00000179869|chr7:48389131-48389153|GGCTGTGGTCCAAGACCTCAGCC/-|frameshift_variant;REV__ENSG00000179869|ENST00000435803|ABCA13;REV__nc|ENSG00000179869|Q86UQ4-3|ABCA13;REV__nc|ENSG00000179869|Q86UQ4-4|ABCA13;REV__nc|ENSG00000179869|Q86UQ4-5|ABCA13;REV__nc|ENSG00000179869|Q86UQ4-6|ABCA13;REV__nc|ENSG00000179869|Q86UQ4-7|ABCA13;REV__nc|ENSG00000179869|Q86UQ4|ABCA13	109.47833844074708	0.029530294723441826	4				NaN	NaN	0	NaN	4040	2691	6727
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6734	20.667	NaN	1197.9	30	0	201.47	0.151				-1	 	0	39	584.9221208646433	1751.7445331941296	3	585.2568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4041	2691	6727
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6752	20.706	NaN	46359	30	0	8635.2	0.214	+			36161	SEKVSHVL	8	90	449.7530196909591	897.4914864487182	2	449.7529602050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEKVSHVL_	ENSG00000137076|ENST00000314888|TLN1;nc|ENSG00000137076|Q9Y490-2|TLN1	133.8126618989323	0.23527224284755519	4				NaN	NaN	0	NaN	4056	2694	6751
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6753	20.71	NaN	4787.1	30	0	1363.2	0.106	+			49438	VVVGGGGVGK	10	51	414.7502629597705	827.485972986341	2	414.7502746582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVVGGGGVGK_	ENSG00000126458|ENST00000246792|RRAS;ENSG00000133818|ENST00000256196|RRAS2;nc|ENSG00000133818|P62070-4|RRAS2	53.351449002276354	0.42630798468005626	4				NaN	NaN	0	NaN	4057	2694	6751
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6754	20.712	NaN	2848.5	30	0	858.17	0.106	+			6721	CAHRRRRG	8	37	337.8537748537075	NaN	0	337.8538513183594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_CAHRRRRG_	ENST00000571332.5_1_17:2310517-2318631:-|nuORF	28.2542754592877	1.7418937515398478	4				NaN	NaN	0	NaN	4058	2694	6751
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6755	20.714	NaN	3000.1	30	0	473.74	0.106	+			35613	SCCPVGCAK	9	58	462.68942719083105	923.3643014484621	2	462.68975830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_SCC(Carbamidomethyl (C))PVGCAK_	CON__P67983;ENSG00000125144|ENST00000379811|MT1G;ENSG00000125148|ENST00000245185|MT2A;ENSG00000169688|ENST00000334346|MT1B;ENSG00000187193|ENST00000394485|MT1X;ENSG00000205364|ENST00000379818|MT1M;ENST00000330439.6_1_16:56660742-56660880:+|nuORF;ENST00000562017.1_1_16:56643131-56643263:+|nuORF;ENST00000563985.1_1_16:56642884-56643263:+|nuORF;ENST00000567300.1_1_16:56642646-56643263:+|nuORF;nc|ENSG00000125144|P13640-2|MT1G;nc|ENSG00000169715|P04732|MT1E	66.42927471994793	0.16001998865088202	4				NaN	NaN	0	NaN	4059	2694	6751
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6756	20.715	NaN	1466.1	30	0	396.72	0.106	+			775	AEFAAKAA	8	40	389.70809056643355	777.4016281996671	2	389.7081298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEFAAKAA_	ENSG00000164916|ENST00000328914|FOXK1;nc|ENSG00000164916|P85037-2|FOXK1	51.33545320467046	0.5859736979383976	4				NaN	NaN	0	NaN	4060	2694	6751
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6757	20.717	NaN	1070.9	30	0	124.11	0.037				-1	QVMLLIDIE	9	30	363.8677673339844	NaN	0	363.8677673339844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_QVM(Oxidation (M))LLIDIE_	ENSG00000106976|ENST00000372923|DNM1;ENST00000441149.6_1_9:130980552-131010310:+|nuORF;nc|ENSG00000106976|Q05193-2|DNM1;nc|ENSG00000106976|Q05193-3|DNM1;nc|ENSG00000106976|Q05193-5|DNM1	25.57405402267927	0.3484490411150625	4				NaN	NaN	0	NaN	4061	2694	6751
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6758	20.718	NaN	5217.9	30	0	470.01	0.14	+			24433	LGCILELASL	10	64	516.2956856579559	1030.5768183827117	2	516.2955322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LGCILELASL_	ENST00000588940.5_1_18:44662751-44676543:-|nuORF	58.78195531508484	0.37691818691852547	4				NaN	NaN	0	NaN	4062	2694	6751
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6776	20.757	NaN	14374	30	0	2170.5	0.214	+			38671	SSIREAISK	9	77	495.78229532959074	989.5500377259815	2	495.78228759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSIREAISK_	ENSG00000196670|ENST00000502412|ZFP62;nc|ENSG00000278970|Q8NB50-2|ZFP62;nc|ENSG00000278970|Q8NB50-3|ZFP62	131.115847015877	0.014647977962315902	4				NaN	NaN	0	NaN	4077	2697	6775
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6777	20.761	NaN	16474	30	0	4220.9	0.106	+			44556	TTAPSLSGK	9	72	431.2373143909072	860.4600758486145	2	431.2370910644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTAPSLSGK_	CTNNB1|p.L103Ffs*10|1|0.06|ENSG00000168036|chr3:41225020-41225021|-/TTATTTAAACTATTATACACTA|frameshift_variant;CTNNB1|p.L301Hfs*16|1|0.05|ENSG00000168036|chr3:41225827-41225831|TTCAA/-|frameshift_variant;CTNNB1|p.M271Wfs*5|1|0.08|ENSG00000168036|chr3:41225733-41225733|A/-|frameshift_variant;ENSG00000168036|ENST00000349496|CTNNB1	58.22992032128504	0.22837015374068087	4				NaN	NaN	0	NaN	4078	2697	6775
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6778	20.763	NaN	16246	30	0	1640.2	0.106				-1	 	0	80	642.9548148131511	1925.842615039653	3	642.9562377929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4079	2697	6775
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6779	20.765	NaN	7151.1	30	0	1762.4	0.106	+			39394	STDNVSITK	9	67	482.7506638361207	963.4867747390414	2	482.75048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STDNVSITK_	ENSG00000133858|ENST00000378743|ZFC3H1;nc|ENSG00000133858|O60293-2|ZFC3H1;nc|ENSG00000133858|O60293-4|ZFC3H1;ZFC3H1|p.E1034Dfs*26|1|0.04|ENSG00000133858|chr12:71632230-71632231|-/AATAAAAATACTG|frameshift_variant;ZFC3H1|p.E390Nfs*4|1|0.39|ENSG00000133858|chr12:71644989-71644989|T/-|frameshift_variant;ZFC3H1|p.K385Nfs*9|5|0.36|ENSG00000133858|chr12:71645001-71645001|T/-|frameshift_variant;ZFC3H1|p.L1048*|1|0.18|ENSG00000133858|chr12:71632189-71632189|A/-|frameshift_variant;ZFC3H1|p.L1693Ffs*10|1|0.1|ENSG00000133858|chr12:71619380-71619381|-/A|frameshift_variant;ZFC3H1|p.V320Sfs*2|1|0.13|ENSG00000133858|chr12:71656942-71656943|-/T|frameshift_variant;ZFC3H1|p.V423Sfs*2|1|0.32|ENSG00000133858|chr12:71644889-71644890|-/T|frameshift_variant	99.01295224348159	0.040209060045561164	4				NaN	NaN	0	NaN	4080	2697	6775
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6780	20.766	NaN	5225.6	30	0	1202.4	0.106	+			33718	RPGHGQSTQE	10	63	366.17546451562055	1095.5045641470617	3	366.1756591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RPGHGQSTQE_	ENST00000343605.4_1_22:31031856-31032117:+|nuORF	47.657333605630114	0.47858658696240314	4				NaN	NaN	0	NaN	4081	2697	6775
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6781	20.768	NaN	2887.8	30	0	277.56	0.034	+			44558	TTAPVVSTR	9	58	466.2636413574219	NaN	0	466.2636413574219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TTAPVVSTR_	CON__O43790;ENSG00000170442|ENST00000423955|KRT86	39.252832667884924	0.27938773122138094	4				NaN	NaN	0	NaN	4082	2697	6775
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6782	20.769	NaN	6262.6	30	0	3855.9	0.143			+	51060	YLKEKLEQQ	9	37	393.55158677482905	1177.6329309246871	3	393.5515441894531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YLKEKLEQQ_	REV__ENSG00000147459|ENST00000276440|DOCK5;REV__ENST00000467709.6_1_8:25227083-25246387:+|nuORF	17.468008924990375	0.6112419832031292	4				NaN	NaN	0	NaN	4083	2697	6775
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6799	20.807	NaN	7429.5	30	0	801.09	0.214	+			48820	VVAQTKAISG	10	64	487.28724039365466	972.5599278541093	2	487.2871398925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVAQTKAISG_	ENSG00000275395|ENST00000616721|FCGBP;FCGBP-ACSS2|1|fusion;nc|ENSG00000275395|Q9Y6R7|FCGBP	86.88156770896713	0.14892753630261096	4				NaN	NaN	0	NaN	4097	2700	6798
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6800	20.81	NaN	44404	30	0	8098.4	0.106				-1	 	0	78	581.2622408623977	1740.7648931873928	3	581.2626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4098	2700	6798
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6801	20.812	NaN	9929.4	30	0	2089	0.106	+			19403	KAPAPRPSL	9	73	468.78475438582785	935.5549558384557	2	468.78448486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KAPAPRPSL_	DHX38|p.A739Pfs*17|1|0.38|ENSG00000140829|chr16:72105086-72105086|G/-|frameshift_variant;DHX38|p.G603Efs*22|1|0.36|ENSG00000140829|chr16:72103767-72103767|G/-|frameshift_variant;DHX38|p.G697Wfs*16|1|0.38|ENSG00000140829|chr16:72104557-72104558|-/T|frameshift_variant;ENSG00000140829|ENST00000268482|DHX38;nc|ENSG00000140829|Q92620-2|DHX38	47.657333605630114	0.33044192980041115	4				NaN	NaN	0	NaN	4099	2700	6798
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6802	20.814	NaN	4517.1	30	0	1618.9	0.106	+			20090	KEKIQTGL	8	52	458.77649477646315	915.5384366197263	2	458.7762145996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEKIQTGL_	ENSG00000140575|ENST00000268182|IQGAP1;ENST00000561132.5_1_15:91029339-91034840:+|nuORF;IQGAP1|p.S1529Afs*10|1|0.15|ENSG00000140575|chr15:90492665-90492665|A/-|frameshift_variant	118.74307786436346	0.2363524257139583	4				NaN	NaN	0	NaN	4100	2700	6798
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6803	20.816	NaN	2280.5	30	0	290.77	0.106	+			38222	SQHEVFVEK	9	64	551.7805786132812	NaN	0	551.7805786132812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SQHEVFVEK_	ARHGAP17|p.P543Lfs*55|1|0.3|ENSG00000140750|chr16:24939460-24939460|G/-|frameshift_variant;ENSG00000140750|ENST00000289968|ARHGAP17;ENST00000575447.1_1_16:24979927-25026645:-|nuORF;nc|ENSG00000140750|Q68EM7-2|ARHGAP17;nc|ENSG00000140750|Q68EM7-4|ARHGAP17;nc|ENSG00000140750|Q68EM7-5|ARHGAP17;nc|ENSG00000140750|Q68EM7-6|ARHGAP17	68.78561909154949	0.11184817726172909	4				NaN	NaN	0	NaN	4101	2700	6798
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6804	20.818	NaN	4234.2	30	0	999.04	0.033	+			48330	VTGAMNVAK	9	54	445.74186811497873	889.4691832967575	2	445.74176025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTGAMNVAK_	ENSG00000167676|ENST00000301286|PLIN4;ENSG00000167676|ENST00000301286|PLIN4;ENSG00000167676|ENST00000301286|PLIN4;PLIN4|p.A561Qfs*13|1|0.1|ENSG00000167676|chr19:4512237-4512237|C/-|frameshift_variant;PLIN4|p.A561Qfs*13|1|0.1|ENSG00000167676|chr19:4512237-4512237|C/-|frameshift_variant;PLIN4|p.A561Qfs*13|1|0.1|ENSG00000167676|chr19:4512237-4512237|C/-|frameshift_variant;PLIN4|p.G1001Afs*9|1|0.16|ENSG00000167676|chr19:4510916-4510916|C/-|frameshift_variant;PLIN4|p.G1001Afs*9|1|0.16|ENSG00000167676|chr19:4510916-4510916|C/-|frameshift_variant;PLIN4|p.G1001Afs*9|1|0.16|ENSG00000167676|chr19:4510916-4510916|C/-|frameshift_variant;PLIN4|p.G374Afs*35|1|0.53|ENSG00000167676|chr19:4512797-4512797|C/-|frameshift_variant;PLIN4|p.G374Afs*35|1|0.53|ENSG00000167676|chr19:4512797-4512797|C/-|frameshift_variant;PLIN4|p.G374Afs*35|1|0.53|ENSG00000167676|chr19:4512797-4512797|C/-|frameshift_variant	75.04331003522576	0.118981335847003	4				NaN	NaN	0	NaN	4102	2700	6798
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6805	20.818	NaN	2029.6	30	0	943.84	0.142	+			47173	VLTGKVEKV	9	35	324.8743688095679	NaN	0	324.8742980957031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VLTGKVEKV_	ENSG00000085978|ENST00000392017|ATG16L1;ENST00000479942.5_1_2:234198871-234202993:+|nuORF;nc|ENSG00000085978|Q676U5-2|ATG16L1;nc|ENSG00000085978|Q676U5-4|ATG16L1;nc|ENSG00000085978|Q676U5-5|ATG16L1	17.364965105453717	0.37820932774828947	4				NaN	NaN	0	NaN	4103	2700	6798
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6825	20.857	NaN	18333	30	0	8626.4	0.214	+			41083	SVINKVTEK	9	52	339.8693017091427	1016.5860757276281	3	339.86944580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVINKVTEK_	ENSG00000124784|ENST00000379834|RIOK1;RIOK1|p.E533Rfs*20|1|0.19|ENSG00000124784|chr6:7414384-7414385|-/A|frameshift_variant	49.536043120802724	0.308405419312776	4				NaN	NaN	0	NaN	4120	2703	6824
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6826	20.86	NaN	8253.9	30	0	1545	0.106				-1	 	0	60	366.7253388463721	731.4361247595442	2	366.7253723144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4121	2703	6824
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6827	20.863	NaN	5795.7	30	0	1055.9	0.106	+			22146	KSQTDSPD	8	67	439.1984911792765	876.382429425353	2	439.19879150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KSQTDSPD_	ENSG00000132823|ENST00000255174|OSER1	57.81127852772723	0.5234495074909924	4				NaN	NaN	0	NaN	4122	2703	6824
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6828	20.864	NaN	17131	30	0	8099.9	0.106	+			22527	KTQKPFLQ	8	70	495.2924556256323	988.5703583180646	2	495.26666259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTQKPFLQ_	DCDC1|p.N526Mfs*10|1|0.2|ENSG00000170959|chr11:30905013-30905013|T/-|frameshift_variant;ENSG00000170959|ENST00000684477|DCDC1;nc|ENSG00000170959|M0R2J8|DCDC1	90.77665401227738	0.27511901818546464	4				NaN	NaN	0	NaN	4123	2703	6824
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6829	20.866	NaN	3643	30	0	799.22	0.106	+			19480	KASVQYVVA	9	59	482.77636971123667	963.5381864892734	2	482.7766418457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KASVQYVVA_	ENSG00000095564|ENST00000265990|BTAF1	79.71258880314673	0.09879134589249085	4				NaN	NaN	0	NaN	4124	2703	6824
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6830	20.868	NaN	2341.4	30	0	420.14	0.032	+			25256	LNLKSSGL	8	50	416.250089611338	830.485626289476	2	416.2502746582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LNLKSSGL_	ENSG00000105131|ENST00000221730|EPHX3;EPHX3|p.R86S|1|0.28|ENSG00000105131|chr19:15231849-15231849|G/T|missense_variant	29.14955571784316	0.7342621283720113	4				NaN	NaN	0	NaN	4125	2703	6824
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6831	20.869	NaN	1339.8	30	0	156.99	0.138	+			21194	KLDAILGR	8	43	443.2792053222656	NaN	0	443.2792053222656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KLDAILGR_	nc|ENSG00000166546|Q3B7T3-3|BEAN1	34.172542307311794	1.7418937515398478	4				NaN	NaN	0	NaN	4126	2703	6824
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6849	20.907	NaN	26424	30	0	13331	0.214			+	37094	SISKWQLK	8	62	495.2924556256323	988.5703583180646	2	495.2924499511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SISKWQLK_	REV__ENSG00000121749|ENST00000485960|TBC1D15;REV__ENST00000479971.1_1_12:72291642-72301148:+|nuORF;REV__ENST00000548679.5_1_12:72291037-72301659:+|nuORF;REV__nc|ENSG00000121749|Q8TC07-3|TBC1D15;REV__nc|ENSG00000121749|Q8TC07|TBC1D15;REV__TBC1D15|p.L440Ffs*8|1|0.12|ENSG00000121749|chr12:71907102-71907103|-/T|frameshift_variant	99.37495909608758	0.2510236104623939	4				NaN	NaN	0	NaN	4141	2706	6848
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6850	20.91	NaN	13314	30	0	2987.7	0.106				-1	IGSCYVAQ	8	70	449.21170985609814	896.4088667789963	2	449.2119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_IGSC(Carbamidomethyl (C))YVAQ_	ENST00000557238.5_1_14:47341050-47530490:-|nuORF;nc|ENSG00000132549|Q7Z7G8-4|VPS13B	53.351449002276354	0.5676011784961348	4				NaN	NaN	0	NaN	4142	2706	6848
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6851	20.912	NaN	11393	30	0	3712.7	0.106			+	39152	SSVPPLADGP	10	62	470.24245260452057	938.4703522758412	2	470.2425537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSVPPLADGP_	REV__ENSG00000177106|ENST00000318562|EPS8L2;REV__ENST00000526909.5_1_11:710402-726978:+|nuORF;REV__ENST00000531393.5_1_11:721935-726978:+|nuORF;REV__EPS8L2|p.V669Gfs*33|1|0.13|ENSG00000177106|chr11:726690-726690|T/-|frameshift_variant;REV__nc|ENSG00000177106|Q9H6S3-2|EPS8L2;REV__nc|ENSG00000177106|Q9H6S3-3|EPS8L2	66.42927471994793	0.3073667423445326	4				NaN	NaN	0	NaN	4143	2706	6848
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6852	20.914	NaN	7539.4	30	0	1577.3	0.106	+			3850	ATALPTGTSK	10	56	473.7635797497719	945.5126065663438	2	473.763427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATALPTGTSK_	ENSG00000196470|ENST00000394725|SIAH1;nc|ENSG00000196470|Q8IUQ4-2|SIAH1;nc|ENSG00000196470|Q8IUQ4-3|SIAH1	70.8162118820467	0.27065172005956	4				NaN	NaN	0	NaN	4144	2706	6848
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6853	20.916	NaN	5613.5	30	0	2912.1	0.106				-1	GVMPGRSV	8	51	409.7129330661768	817.4113131991536	2	409.7130126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_GVM(Oxidation (M))PGRSV_	ENST00000322028.4_1_11:839996-840302:-|nuORF	21.70233525837049	0.7917639344264583	4				NaN	NaN	0	NaN	4145	2706	6848
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6854	20.918	NaN	5148	30	0	780.68	0.106			+	18748	ITKSYTTN	8	62	464.2425125801423	926.4704722270847	2	464.242431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ITKSYTTN_	REV__ENSG00000138152|ENST00000260723|BTBD16;REV__nc|ENSG00000138152|Q32M84-2|BTBD16	63.30626980617807	0.4690498839812213	4				NaN	NaN	0	NaN	4146	2706	6848
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6855	20.919	NaN	2678.2	30	0	371.37	0.036	+			16823	HPDRSQPAF	9	59	527.7567704425029	1053.4989879518057	2	527.7574462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HPDRSQPAF_	ENSG00000213676|ENST00000375203|ATF6B;ENST00000494022.1_1_6:32065974-32085368:-|nuORF;nc|ENSG00000213676|Q99941-2|ATF6B	42.396135135203025	0.392153681582562	4				NaN	NaN	0	NaN	4147	2706	6848
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6874	20.957	NaN	25287	30	0	4517.9	0.214	+			5349	ATVTPSPVK	9	80	450.2631702742764	898.5117876153528	2	450.2632141113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATVTPSPVK_	ENSG00000069275|ENST00000367142|NUCKS1;nc|ENSG00000069275|Q9H1E3-2|NUCKS1	104.0567914643314	0.03506238181059741	4				NaN	NaN	0	NaN	4163	2709	6873
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6875	20.961	NaN	42640	30	0	9154.6	0.106	+			16139	HEAEGHIVTC	10	84	548.2479769227938	1094.4814009123875	2	548.2484130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HEAEGHIVTC_	ENSG00000100028|ENST00000215829|SNRPD3;ENST00000468770.1_1_22:24953642-24953888:+|nuORF;nc|ENSG00000286070|P62318-2|SNRPD3	139.97047562133406	0.010761959789928152	4				NaN	NaN	0	NaN	4164	2709	6873
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6876	20.963	NaN	8165.1	30	0	1596.1	0.106	+			91	AADCAHEL	8	61	443.6896883049546	885.3648236767092	2	443.68963623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_AADC(Carbamidomethyl (C))AHEL_	ENSG00000157379|ENST00000288111|DHRS1;ENST00000558340.1_1_14:24760067-24761569:-|nuORF;ENST00000561137.5_1_14:24760413-24761527:-|nuORF;ENST00000561273.5_1_14:24760714-24761569:-|nuORF	90.77665401227738	0.27511901818546464	4				NaN	NaN	0	NaN	4165	2709	6873
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6877	20.964	NaN	1973.3	30	0	387.96	0.106			+	16080	HCSKAMIDAY	10	56	569.754115473465	1137.49367801373	2	569.754638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HCSKAMIDAY_	REV__ENSG00000196218|ENST00000359596|RYR1;REV__ENSG00000198626|ENST00000366574|RYR2;REV__nc|ENSG00000196218|P21817-2|RYR1;REV__nc|ENSG00000196218|P21817-3|RYR1;REV__nc|ENSG00000198626|Q92736-2|RYR2;REV__RYR2|p.S4583Lfs*11|1|0.45|ENSG00000198626|chr1:237792286-237792286|T/-|frameshift_variant	82.24051045832904	0.17731618517892733	4				NaN	NaN	0	NaN	4166	2709	6873
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6878	20.966	NaN	2699.7	30	0	527.61	0.106	+			13890	GRFDVKIK	8	55	481.7925531145774	961.5705532959548	2	481.79241943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GRFDVKIK_	nc|ENSG00000143153|P05026-2|ATP1B1	29.14955571784316	0.7342621283720113	4				NaN	NaN	0	NaN	4167	2709	6873
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6879	20.968	NaN	7005.7	30	0	2951.1	0.033	+			3992	ATAVYQAK	8	58	426.23459732464005	850.4546417160801	2	426.234619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATAVYQAK_	ENSG00000136146|ENST00000258648|MED4;nc|ENSG00000136146|Q9NPJ6-2|MED4	66.42927471994793	0.4381325844043345	4				NaN	NaN	0	NaN	4168	2709	6873
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6880	20.969	NaN	1483.1	30	0	112.41	0.14	+			13243	GILKPLPKK	9	62	497.344317153856	992.6740813745121	2	497.3442687988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GILKPLPKK_	ENSG00000090861|ENST00000261772|AARS1;nc|ENSG00000090861|P49588-2|AARS1	87.75429964447693	0.0711966946989736	4				NaN	NaN	0	NaN	4169	2709	6873
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6898	21.004	NaN	28299	30	0	5129.4	0.214	+			2630	AQIKEHLLK	9	77	360.5569976320108	1078.6491634962324	3	360.5570373535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AQIKEHLLK_	EIF2B5|p.L605Pfs*9|1|0.26|ENSG00000145191|chr3:184143504-184143505|-/C|frameshift_variant;ENSG00000145191|ENST00000648915|EIF2B5;ENST00000481054.5_1_3:183853173-183856676:+|nuORF;ENST00000491144.5_1_3:183853173-183855624:+|nuORF	140.11223852658463	0.010427410095706195	4				NaN	NaN	0	NaN	4184	2712	6897
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6899	21.008	NaN	11715	30	0	973.55	0.106	+			2631	AQIKEHLLK	9	76	540.3317446961703	1078.6489364591405	2	540.3323364257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AQIKEHLLK_	EIF2B5|p.L605Pfs*9|1|0.26|ENSG00000145191|chr3:184143504-184143505|-/C|frameshift_variant;ENSG00000145191|ENST00000648915|EIF2B5;ENST00000481054.5_1_3:183853173-183856676:+|nuORF;ENST00000491144.5_1_3:183853173-183855624:+|nuORF	142.36107225718385	0.009372392051035914	4				NaN	NaN	0	NaN	4185	2712	6897
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6900	21.01	NaN	9300.4	30	0	1261.6	0.106	+			35762	SDVTLPKNP	9	70	485.7636871489341	969.5128213646682	2	485.7633361816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SDVTLPKNP_	ENSG00000123572|ENST00000243300|NRK;nc|ENSG00000123572|Q7Z2Y5-2|NRK	51.33545320467046	0.2872990594074956	4				NaN	NaN	0	NaN	4186	2712	6897
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6901	21.012	NaN	9304.1	30	0	2004.5	0.106	+			18603	ISRSHYSP	8	66	473.7405470171225	945.466541101045	2	473.74029541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ISRSHYSP_	ENSG00000079459|ENST00000220584|FDFT1;ENST00000446331.6_1_8:11660331-11696115:+|nuORF;nc|ENSG00000079459|P37268-2|FDFT1;nc|ENSG00000079459|P37268-3|FDFT1;nc|ENSG00000079459|P37268-4|FDFT1;nc|ENSG00000079459|P37268-5|FDFT1	71.29570347882199	0.39610197767395533	4				NaN	NaN	0	NaN	4187	2712	6897
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6902	21.014	NaN	7397	30	0	2120	0.106	+			39312	STATATVSVGK	11	73	511.2796976055016	NaN	0	511.2796325683594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STATATVSVGK_	ENSG00000261150|ENST00000615648|EPPK1;EPPK1|p.G2015Vfs*36|2|0.33|ENSG00000261150|chr8:143867210-143867210|C/-|frameshift_variant;EPPK1|p.Q829Rfs*8|1|0.05|ENSG00000261150|chr8:143870770-143870770|C/-|frameshift_variant;EPPK1|p.Y695Ifs*68|1|0.36|ENSG00000261150|chr8:143871171-143871172|-/T|frameshift_variant	122.17797606160879	0.0005977828762625732	4				NaN	NaN	0	NaN	4188	2712	6897
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6903	21.015	NaN	6208.4	30	0	709.99	0.034	+			25506	LPSNGGHSY	9	66	466.21686117304466	930.4191694128893	2	466.21673583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LPSNGGHSY_	ENSG00000103241|ENST00000262426|FOXF1	84.9155231211612	0.07920012719736333	4				NaN	NaN	0	NaN	4189	2712	6897
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6904	21.016	NaN	3292.6	30	0	468.95	0.139	+			42491	TANEANPLK	9	55	479.2536062070869	956.4926594809738	2	479.2533264160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TANEANPLK_	ENSG00000187325|ENST00000341864|TAF9B	90.60085204095205	0.06317133949006545	4				NaN	NaN	0	NaN	4190	2712	6897
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6922	21.055	NaN	4880.4	30	0	657.36	0.215	+			43307	TFTTAWVPH	9	58	530.2661305834916	1058.5177082337832	2	530.2664794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TFTTAWVPH_	ENSG00000117983|ENST00000529681|MUC5B;MUC5B|p.A1645Gfs*130|1|0.48|ENSG00000117983|chr11:1241806-1241807|-/C|frameshift_variant;MUC5B|p.E2447Vfs*233|1|0.15|ENSG00000117983|chr11:1244218-1244219|TG/-|frameshift_variant;MUC5B|p.E2929Gfs*98|1|0.13|ENSG00000117983|chr11:1245660-1245661|-/GC|frameshift_variant;MUC5B|p.P2717Qfs*3|2|0.21|ENSG00000117983|chr11:1245025-1245025|C/-|frameshift_variant;MUC5B|p.P3417Qfs*3|1|0.41|ENSG00000117983|chr11:1247125-1247125|C/-|frameshift_variant;MUC5B|p.S2205Qfs*54|1|0.2|ENSG00000117983|chr11:1243486-1243487|-/C|frameshift_variant;MUC5B|p.S3126Pfs*13|1|0.37|ENSG00000117983|chr11:1246251-1246251|C/-|frameshift_variant;MUC5B|p.S3878Pfs*27|1|0.13|ENSG00000117983|chr11:1248507-1248507|C/-|frameshift_variant;MUC5B|p.S4017Lfs*56|1|0.22|ENSG00000117983|chr11:1248928-1248929|-/C|frameshift_variant;MUC5B|p.T4706Pfs*4|2|0.37|ENSG00000117983|chr11:1250996-1250996|A/-|frameshift_variant	29.14955571784316	0.5308295550522326	4				NaN	NaN	0	NaN	4205	2715	6921
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6923	21.059	NaN	7260.2	30	0	1185.8	0.106			+	46781	VHDKLSVK	8	68	463.27664920622203	924.5387454792441	2	463.2764587402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VHDKLSVK_	REV__KCNQ2|p.R442H|1|0.31|ENSG00000075043|chr20:63415103-63415103|C/T|missense_variant	74.25504064058377	0.37144338840759816	4				NaN	NaN	0	NaN	4206	2715	6921
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6924	21.061	NaN	1575.6	30	0	174.26	0.106			+	21839	KRGMSEAISK	10	58	561.8002986792417	1121.5860444252833	2	561.8004760742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_KRGM(Oxidation (M))SEAISK_	REV__tr|U7T2B6|U7T2B6_FUSNULonproteaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=lonPE=2SV=1	65.15724298150197	0.31893571707528906	4				NaN	NaN	0	NaN	4207	2715	6921
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6925	21.063	NaN	4872.2	30	0	804.69	0.106	+			34942	SAAKGVAAY	9	62	419.2267289226696	836.4389049121393	2	419.2267150878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SAAKGVAAY_	ENSG00000062822|ENST00000440232|POLD1;ENST00000596648.1_1_19:50918770-50919194:+|nuORF	74.25504064058377	0.12238981753128622	4				NaN	NaN	0	NaN	4208	2715	6921
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6926	21.064	NaN	9110.2	30	0	3356.1	0.106	+			9876	EQIARQQQQLL	11	64	452.25109602666384	1353.7314586801915	3	452.25146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EQIARQQQQLL_	ENSG00000110693|ENST00000683767|SOX6;ENSG00000134532|ENST00000451604|SOX5;nc|ENSG00000110693|P35712-2|SOX6;nc|ENSG00000110693|P35712-3|SOX6;nc|ENSG00000110693|P35712-4|SOX6;nc|ENSG00000134532|P35711-2|SOX5;nc|ENSG00000134532|P35711-4|SOX5;nc|ENSG00000134532|P35711-5|SOX5;SOX5|p.K639Sfs*77|1|0.78|ENSG00000134532|chr12:23536525-23536525|T/-|frameshift_variant;SOX6|p.F490Lfs*7|1|0.35|ENSG00000110693|chr11:16046667-16046667|A/-|frameshift_variant;SOX6|p.G294Wfs*8|1|0.36|ENSG00000110693|chr11:16111822-16111823|-/G|frameshift_variant;SOX6|p.P293Lfs*3|1|0.36|ENSG00000110693|chr11:16111823-16111823|G/-|frameshift_variant	42.33807565288922	0.5259510355945483	4				NaN	NaN	0	NaN	4209	2715	6921
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6927	21.066	NaN	2808.7	30	0	762.03	0.106	+			50717	YEGKVSSV	8	49	434.7240335030326	867.4335140728653	2	434.72406005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YEGKVSSV_	ENSG00000198700|ENST00000361565|IPO9	37.81151784470057	0.6698925118251505	4				NaN	NaN	0	NaN	4210	2715	6921
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6928	21.068	NaN	2293.8	30	0	376.01	0.03	+			13312	GKGPGGPP	8	37	333.6818864539743	665.3492199747486	2	333.68194580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GKGPGGPP_	ENSG00000169605|ENST00000377938|GKN1;REV__nc|ENSG00000130731|Q96S19-4|METTL26;REV__nc|ENSG00000130731|Q96S19-6|METTL26	5.08689130490037	0.7762486542322466	4				NaN	NaN	0	NaN	4211	2715	6921
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6946	21.106	NaN	12233	30	0	3062.1	0.214			+	40480	STYAAGVIST	10	67	485.24755152235207	968.4805501115042	2	485.2476806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STYAAGVIST_	REV__tr|U7T5N7|U7T5N7_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00029PE=4SV=1	42.396135135203025	0.5270658956260207	4				NaN	NaN	0	NaN	4226	2718	6945
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6947	21.109	NaN	24724	30	0	7675.9	0.106	+			22449	KTLESAVVK	9	82	487.7974096173359	973.5802663014719	2	487.7973937988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTLESAVVK_	ENSG00000106772|ENST00000376718|PRUNE2;ENST00000492157.5_1_9:79438526-79520879:-|nuORF;nc|ENSG00000106772|Q8WUY3-2|PRUNE2;nc|ENSG00000106772|Q8WUY3-3|PRUNE2;nc|ENSG00000106772|Q8WUY3-4|PRUNE2;PRUNE2|p.L2591Qfs*12|1|0.19|ENSG00000106772|chr9:76703839-76703842|CTAA/-|frameshift_variant	122.93914200107957	0.019420478173996256	4				NaN	NaN	0	NaN	4227	2718	6945
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6948	21.111	NaN	4831.1	30	0	527.86	0.106	+			33437	RILACGVAK	9	72	494.291830566904	986.5691082006081	2	494.2917175292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_RILAC(Carbamidomethyl (C))GVAK_	ENSG00000265972|ENST00000582401|TXNIP	90.36981228632155	0.0638227155548745	4				NaN	NaN	0	NaN	4228	2718	6945
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6949	21.113	NaN	25012	30	0	8154	0.106	+			7	AAAAPGRAL	9	54	399.2348258997056	796.4550988662112	2	399.2351379394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AAAAPGRAL_	ENST00000267984.3_1_15:81293571-81293748:+|nuORF;REV__ENST00000533080.5_1_11:44748805-44786009:+|nuORF	76.84663266511073	0.11118375776443899	4				NaN	NaN	0	NaN	4229	2718	6945
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6950	21.115	NaN	7033.7	30	0	1363.6	0.106			+	44570	TTATAKLPK	9	65	465.78440313214145	929.5542533310829	2	465.7842712402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TTATAKLPK_	REV__ABR|p.L352Wfs*29|2|0.56|ENSG00000159842|chr17:1067205-1067205|G/-|frameshift_variant;REV__ENSG00000159842|ENST00000302538|ABR;REV__nc|ENSG00000159842|Q12979-2|ABR;REV__nc|ENSG00000159842|Q12979-4|ABR	42.396135135203025	0.392153681582562	4				NaN	NaN	0	NaN	4230	2718	6945
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6951	21.117	NaN	44188	30	0	23190	0.038				-1	STCNTKLTLK	10	70	389.21284222448446	1164.6166972736535	3	389.2130432128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_STC(Carbamidomethyl (C))NTKLTLK_	ENSG00000169756|ENST00000544547|LIMS1;ENSG00000256671|ENST00000632897|LIMS4;ENSG00000256977|ENST00000480744|LIMS3;nc|ENSG00000169756|P48059-3|LIMS1;nc|ENSG00000169756|P48059-4|LIMS1;nc|ENSG00000169756|P48059-5|LIMS1;nc|ENSG00000169756|P48059|LIMS1	42.33807565288922	0.5276008846745733	4				NaN	NaN	0	NaN	4231	2718	6945
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6952	21.117	NaN	3751.8	30	0	489.9	0.14			+	16265	HEFVNVKQ	8	64	500.76436510277006	999.5141772723401	2	500.7644348144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HEFVNVKQ_	REV__ENST00000531788.5_1_6:135639599-135639752:-|nuORF	53.351449002276354	0.5676011784961348	4				NaN	NaN	0	NaN	4232	2718	6945
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6970	21.153	NaN	8666.7	30	0	516.21	0.214	+			36289	SEREKVAQL	9	72	530.293235599302	1058.5719182654038	2	530.2940673828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEREKVAQL_	ENSG00000108592|ENST00000427159|FTSJ3	68.84614121027924	0.14577793175421136	4				NaN	NaN	0	NaN	4247	2721	6969
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6971	21.157	NaN	3430.7	30	0	1157.4	0.106	+			43484	TGPEGHAL	8	52	391.19549182765905	780.3764307221181	2	391.195556640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TGPEGHAL_	CRMP1|p.F275Lfs*28|1|0.3|ENSG00000072832|chr4:5839665-5839665|A/-|frameshift_variant;ENSG00000072832|ENST00000324989|CRMP1;ENST00000506216.5_1_4:5749932-5890196:-|nuORF;ENST00000511535.1_1_4:5823489-5889136:-|nuORF;nc|ENSG00000072832|Q14194|CRMP1	60.29395666154354	0.49887135096048313	4				NaN	NaN	0	NaN	4248	2721	6969
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6972	21.159	NaN	2609	30	0	363.89	0.106			+	21776	KQSSEVKVV	9	59	502.2926482164586	NaN	0	502.2926330566406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KQSSEVKVV_	REV__ENST00000025301.3_1_13:42876393-42876444:+|nuORF	47.95952297671804	0.22075498469600283	4				NaN	NaN	0	NaN	4249	2721	6969
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6973	21.161	NaN	4255.9	30	0	641.35	0.106	+			16162	HEAERTEVL	9	71	542.2748791044056	1082.5352052756111	2	542.2760009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HEAERTEVL_	CNTROB|p.L713Cfs*27|1|0.4|ENSG00000170037|chr17:7947710-7947710|T/-|frameshift_variant;ENSG00000170037|ENST00000563694|CNTROB;ENST00000571632.5_1_17:7838298-7849136:+|nuORF;nc|ENSG00000170037|Q8N137-2|CNTROB;nc|ENSG00000170037|Q8N137-3|CNTROB;nc|ENSG00000170037|Q8N137-4|CNTROB;nc|ENSG00000170037|Q8N137-5|CNTROB	93.1432384553994	0.056003526918089595	4				NaN	NaN	0	NaN	4250	2721	6969
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6974	21.163	NaN	12056	30	0	1592.4	0.106				-1	 	0	73	618.6039384283181	1852.7899858851542	3	618.60498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4251	2721	6969
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6975	21.164	NaN	1479.6	30	0	187.3	0.035			+	20974	KKEPSMYV	8	47	491.2593880953123	NaN	0	491.2596130371094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KKEPSMYV_	REV__nc|ENSG00000152595|Q9NQ76-2|MEPE	37.15910966729921	1.7418937515398478	4				NaN	NaN	0	NaN	4252	2721	6969
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6976	21.165	NaN	1588.9	30	0	272.38	0.144	+			15252	GTTCFKLAPPL	11	42	383.20973706794473	NaN	0	383.543701171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GTTCFKLAPPL_	ENSG00000100078|ENST00000215885|PLA2G3	24.231819034082204	0.456735970842152	4				NaN	NaN	0	NaN	4253	2721	6969
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6994	21.201	NaN	6457.2	30	0	1089.6	0.214				-1	 	0	65	486.80775216361224	971.6009513940245	2	486.8077087402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4268	2724	6993
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6995	21.205	NaN	29412	30	0	3233.7	0.106	+			35772	SEADKIKVA	9	80	480.7713589805871	959.5281650279742	2	480.7712707519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEADKIKVA_	ENSG00000178035|ENST00000326739|IMPDH2;ENST00000466147.5_1_3:49062090-49062580:-|nuORF;ENST00000484872.1_1_3:49061926-49062670:-|nuORF	117.81106730687013	0.02252488733980868	4				NaN	NaN	0	NaN	4269	2724	6993
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6996	21.207	NaN	13495	30	0	1800.4	0.106	+			48570	VTQAPISAR	9	70	471.7716128348467	NaN	0	471.7716064453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTQAPISAR_	ENSG00000101407|ENST00000373447|TTI1	104.42354056486148	0.014733134862207843	4				NaN	NaN	0	NaN	4270	2724	6993
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6997	21.209	NaN	5357.1	30	0	1016.7	0.106	+			2876	ASASASLPTK	10	60	466.7558117648477	931.4970705964954	2	466.75567626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASASASLPTK_	ENSG00000141568|ENST00000335255|FOXK2;ENST00000473637.6_1_17:80553997-80559372:+|nuORF;ENST00000529652.1_1_17:80558017-80559372:+|nuORF;ENST00000571989.1_1_17:80551586-80559372:+|nuORF	106.88024417677582	0.05726438866303799	4				NaN	NaN	0	NaN	4271	2724	6993
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6998	21.211	NaN	2705	30	0	620.58	0.106	+			39816	STLGPKTFHR	10	45	381.8801906037145	NaN	0	381.88037109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STLGPKTFHR_	CPED1|p.H927Tfs*4|2|0.25|ENSG00000106034|chr7:121271333-121271334|-/A|frameshift_variant;ENSG00000106034|ENST00000310396|CPED1;nc|ENSG00000106034|A4D0V7-2|CPED1	45.02220120713402	0.3370728479115332	4				NaN	NaN	0	NaN	4272	2724	6993
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6999	21.212	NaN	1398.7	30	0	116.7	0.032			+	709	AEARVVQG	8	44	415.2298583984375	NaN	0	415.2298583984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEARVVQG_	REV__ENSG00000160867|ENST00000292408|FGFR4;REV__FGFR4|p.E717Rfs*8|1|0.44|ENSG00000160867|chr5:177096729-177096730|-/C|frameshift_variant;REV__FGFR4|p.G687Afs*35|1|0.23|ENSG00000160867|chr5:177096644-177096644|G/-|frameshift_variant;REV__nc|ENSG00000160867|P22455-2|FGFR4	42.396135135203025	1.7418937515398478	4				NaN	NaN	0	NaN	4273	2724	6993
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7000	21.213	NaN	861.38	30	0	198.08	0.14			+	22784	KVFFKPLE	8	42	504.2982177734375	NaN	0	504.2982177734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KVFFKPLE_	REV__tr|U7SEA4|U7SEA4_FUSNUHemolysinactivation/secretionproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02368PE=4SV=1	34.172542307311794	1.7418937515398478	4				NaN	NaN	0	NaN	4274	2724	6993
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7020	21.25	NaN	13028	30	0	8311.3	0.214				-1	 	0	41	323.20140724573	644.3882615582601	2	323.2013854980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4291	2727	7019
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7021	21.253	NaN	11120	30	0	1959	0.106	+			39491	STFKLKSEVNK	11	81	427.5780560696447	NaN	0	427.57843017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STFKLKSEVNK_	ENSG00000189057|ENST00000343597|FAM111B;FAM111B|p.I283Lfs*16|1|0.32|ENSG00000189057|chr11:59124938-59124938|A/-|frameshift_variant;FAM111B|p.I433Vfs*2|1|0.04|ENSG00000189057|chr11:59125393-59125394|-/GTTTG|frameshift_variant;FAM111B|p.N499Tfs*10|1|0.11|ENSG00000189057|chr11:59125589-59125589|A/-|frameshift_variant;FAM111B|p.Q276Hfs*6|1|0.07|ENSG00000189057|chr11:59124924-59124925|-/T|frameshift_variant;nc|ENSG00000189057|Q6SJ93-2|FAM111B	53.01288593483079	0.2936790592215139	4				NaN	NaN	0	NaN	4292	2727	7019
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7022	21.255	NaN	38102	30	0	20429	0.106	+			6011	AVMDNKNPTIK	11	81	410.8884537796437	1229.6435319391312	3	410.88848876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVMDNKNPTIK_	CKAP5|p.K1126Rfs*25|1|0.46|ENSG00000175216|chr11:46767609-46767609|T/-|frameshift_variant;CKAP5|p.V1971Lfs*42|1|0.03|ENSG00000175216|chr11:46744211-46744212|-/TTGAAAAAAAG|frameshift_variant;ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5	63.69406221917213	0.2904805327065929	4				NaN	NaN	0	NaN	4293	2727	7019
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7023	21.257	NaN	8195.5	30	0	1072	0.106	+			35037	SADKTVRVY	9	66	519.7826268182877	1037.5507007033752	2	519.782958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SADKTVRVY_	ENSG00000103994|ENST00000564754|ZNF106;nc|ENSG00000103994|Q9H2Y7-2|ZNF106;nc|ENSG00000103994|Q9H2Y7|ZNF106	104.01359247289065	0.03510646158778409	4				NaN	NaN	0	NaN	4294	2727	7019
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7024	21.259	NaN	7958.4	30	0	4501.9	0.106	+			41047	SVIEKLAKK	9	52	339.2217360078785	1014.6433786238356	3	339.2218017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVIEKLAKK_	ENSG00000168016|ENST00000645898|TRANK1;nc|ENSG00000168016|O15050|TRANK1;TRANK1|p.F2073Lfs*13|1|0.1|ENSG00000168016|chr3:36833232-36833232|A/-|frameshift_variant;TRANK1|p.P972Qfs*12|1|0.34|ENSG00000168016|chr3:36856675-36856675|G/-|frameshift_variant;TRANK1|p.V1077Wfs*30|1|0.29|ENSG00000168016|chr3:36856362-36856362|T/-|frameshift_variant	56.43379154798735	0.2433427591689151	4				NaN	NaN	0	NaN	4295	2727	7019
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7025	21.261	NaN	3142.6	30	0	1094.2	0.036			+	30616	QARPSGECFT	10	58	548.2479769227938	1094.4814009123875	2	548.249755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QARPSGECFT_	REV__ENSG00000135828|ENST00000367559|RNASEL;REV__nc|ENSG00000135828|Q05823-2|RNASEL;REV__RNASEL|p.M644*|2|0.18|ENSG00000135828|chr1:182576365-182576365|T/-|frameshift_variant;REV__RNASEL|p.M644Nfs*3|2|0.29|ENSG00000135828|chr1:182576364-182576365|-/T|frameshift_variant;REV__RNASEL|p.R651Kfs*11|2|0.31|ENSG00000135828|chr1:182576343-182576344|-/T|frameshift_variant	39.252832667884924	0.5560298534376815	4				NaN	NaN	0	NaN	4296	2727	7019
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7026	21.261	NaN	2918.3	30	0	484.78	0.14				-1	SCPCVIAQ	8	54	439.1984911792765	876.382429425353	2	439.1991271972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_SC(Carbamidomethyl (C))PCVIAQ_	ENSG00000106462|ENST00000320356|EZH2;ENST00000492143.5_1_7:148504740-148513906:-|nuORF;nc|ENSG00000106462|Q15910-3|EZH2;nc|ENSG00000106462|Q15910-4|EZH2;nc|ENSG00000106462|Q15910|EZH2	38.80614096846853	0.6637206697844082	4				NaN	NaN	0	NaN	4297	2727	7019
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7044	21.3	NaN	23136	30	0	4297.9	0.214	+			3736	ATAAVTAAVK	10	84	451.76888422882894	901.5232155244579	2	451.7689514160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATAAVTAAVK_	ENSG00000165476|ENST00000373758|REEP3;nc|ENSG00000165476|Q6NUK4-2|REEP3	173.39201167336012	0.002607008819474693	4				NaN	NaN	0	NaN	4312	2730	7043
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7045	21.304	NaN	12066	30	0	3368.5	0.106	+			44619	TTEPLPEK	8	68	457.7449537252515	913.475354517303	2	457.74542236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTEPLPEK_	ENSG00000076554|ENST00000518937|TPD52;ENST00000520877.5_1_8:80950353-80963533:-|nuORF;ENST00000521354.5_1_8:80950353-81083761:-|nuORF;ENST00000521618.1_1_8:80950353-80954926:-|nuORF;ENST00000523395.5_1_8:80950353-80963533:-|nuORF;nc|ENSG00000076554|P55327-2|TPD52;nc|ENSG00000076554|P55327-3|TPD52;nc|ENSG00000076554|P55327-5|TPD52;nc|ENSG00000076554|P55327-6|TPD52;nc|ENSG00000076554|P55327-7|TPD52;nc|ENSG00000076554|P55327|TPD52	84.9155231211612	0.2928622555056503	4				NaN	NaN	0	NaN	4313	2730	7043
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7046	21.306	NaN	16374	30	0	4257	0.106	+			37818	SMNANTITK	9	77	490.24791067365436	978.4812684141087	2	490.2474670410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SMNANTITK_	ENSG00000175467|ENST00000312397|SART1	142.36107225718385	0.009372392051035914	4				NaN	NaN	0	NaN	4314	2730	7043
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7047	21.308	NaN	10471	30	0	6054	0.106				-1	YEDLQCTNIL	10	64	634.7955121472082	1267.5764713612164	2	634.797119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_YEDLQC(Carbamidomethyl (C))TNIL_	ENSG00000159625|ENST00000360716|DRC7;nc|ENSG00000159625|Q8IY82-2|DRC7	54.776311868738084	0.41334902933431344	4				NaN	NaN	0	NaN	4315	2730	7043
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7048	21.31	NaN	7047.9	30	0	1452.2	0.106	+			14805	GTLERGILKK	10	56	372.23616189646333	1113.68665628959	3	372.2363586425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTLERGILKK_	ENSG00000178952|ENST00000313511|TUFM;ENST00000569217.1_1_16:28855425-28855644:-|nuORF	54.722347961057174	0.4138398245444204	4				NaN	NaN	0	NaN	4316	2730	7043
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7049	21.311	NaN	11546	30	0	5812.2	0.039	+			10662	EYRELMENIE	10	64	663.3061197636843	1324.5976865941684	2	663.3081665039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EYRELMENIE_	tr|U7T5J2|U7T5J2_FUSNUPhagetailproteinIOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00077PE=4SV=1	47.657333605630114	0.47858658696240314	4				NaN	NaN	0	NaN	4317	2730	7043
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7050	21.312	NaN	5430.6	30	0	1682.7	0.151	+			9750	ENFQYYVELEW	11	67	507.2302435445606	1518.6689012338818	3	507.2309875488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ENFQYYVELEW_	L1PA8_dup4178|chr8:94121319-94127043:-|4.057818296907117|0.2856926403965029|3.83|481.0|265|2|anti-sense	19.262678746197807	0.7802940895261122	4				NaN	NaN	0	NaN	4318	2730	7043
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7068	21.351	NaN	137920	30	0	65820	0.214	+			40913	SVFQQGMKNK	10	74	389.537413822865	1165.590412068795	3	389.53759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVFQQGMKNK_	ENSG00000018625|ENST00000361216|ATP1A2;ENSG00000105409|ENST00000648268|ATP1A3;ENSG00000163399|ENST00000295598|ATP1A1;ENST00000479960.1_1_1:116943772-116944278:+|nuORF;nc|ENSG00000105409|P13637-2|ATP1A3;nc|ENSG00000105409|P13637-3|ATP1A3;nc|ENSG00000163399|P05023-3|ATP1A1;nc|ENSG00000163399|P05023-4|ATP1A1	55.08391021199286	0.41055145962533396	4				NaN	NaN	0	NaN	4333	2733	7067
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7069	21.354	NaN	35948	30	0	10471	0.106	+			4493	ATITDKEMLKK	11	85	426.5759592558678	1276.7060483678035	3	426.57568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATITDKEMLKK_	ANKRD17|p.L2249Yfs*84|1|0.34|ENSG00000132466|chr4:73090884-73090884|G/-|frameshift_variant;ENSG00000132466|ENST00000358602|ANKRD17;ENST00000514252.1_1_4:73978989-74017230:-|nuORF;nc|ENSG00000132466|O75179-2|ANKRD17;nc|ENSG00000132466|O75179-6|ANKRD17;nc|ENSG00000132466|O75179-7|ANKRD17	89.56079334093651	0.10057263200875313	4				NaN	NaN	0	NaN	4334	2733	7067
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7070	21.356	NaN	13249	30	0	1321	0.106	+			12739	GEKVVKTAL	9	76	472.7920972972491	943.5696416612982	2	472.7924499511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEKVVKTAL_	ENSG00000133835|ENST00000510025|HSD17B4;ENST00000511186.5_1_5:118788168-118811542:+|nuORF;ENST00000515235.6_1_5:118788237-118827866:+|nuORF;HSD17B4|p.L703Ifs*15|1|0.06|ENSG00000133835|chr5:119536530-119536531|-/GAAAAATA|frameshift_variant;nc|ENSG00000133835|P51659-2|HSD17B4;nc|ENSG00000133835|P51659-3|HSD17B4	123.20810148215591	0.019257656778428764	4				NaN	NaN	0	NaN	4335	2733	7067
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7071	21.358	NaN	2335.5	30	0	489.68	0.106			+	30760	QDPPTIRITV	10	41	380.5519201807279	1138.6339311423837	3	380.5520324707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QDPPTIRITV_	REV__ENSG00000158553|ENST00000444565|POM121L2;REV__POM121L2|p.D642Gfs*77|1|0.06|ENSG00000158553|chr6:27310248-27310249|-/TACAATTCCT|frameshift_variant;REV__POM121L2|p.P496Qfs*17|1|0.14|ENSG00000158553|chr6:27310684-27310684|G/-|frameshift_variant	28.081489160057373	0.6505064946289502	4				NaN	NaN	0	NaN	4336	2733	7067
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7072	21.36	NaN	9263.9	30	0	1373.3	0.106	+			3303	ASLSPSVSK	9	67	438.24493846613166	874.4753239990633	2	438.24359130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASLSPSVSK_	ENSG00000118689|ENST00000406360|FOXO3;ENST00000395675.4_1_17:18575090-18575600:-|nuORF;nc|ENSG00000118689|O43524-2|FOXO3	95.81516180277367	0.04847050768394289	4				NaN	NaN	0	NaN	4337	2733	7067
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7073	21.362	NaN	824.92	30	0	127.94	0.031	+			45679	VAAARAGL	8	32	364.72412109375	NaN	0	364.72412109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VAAARAGL_	ENST00000262158.6_1_18:46476520-46476862:-|nuORF	42.47446043378293	1.7418937515398478	4				NaN	NaN	0	NaN	4338	2733	7067
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7074	21.362	NaN	4260.2	30	0	2168.4	0.138			+	38405	SSAASVAPSL	10	54	445.23465358070285	888.4547542282057	2	445.2345886230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSAASVAPSL_	REV__ENSG00000282881|ENST00000697682|TMEM275	47.657333605630114	0.47858658696240314	4				NaN	NaN	0	NaN	4339	2733	7067
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7092	21.4	NaN	38905	30	0	3837.9	0.214	+			34053	RSMEAHNILSK	11	97	429.22754577959904	1284.660807938997	3	429.22735595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RSMEAHNILSK_	ENSG00000160075|ENST00000291386|SSU72;ENST00000378725.3_1_1:1480120-1509937:-|nuORF;nc|ENSG00000160075|Q9NP77-2|SSU72;SSU72|p.L82Ffs*8|1|0.34|ENSG00000160075|chr1:1544981-1544982|-/A|frameshift_variant	135.09803861685143	0.0008978100578771298	4				NaN	NaN	0	NaN	4354	2736	7091
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7093	21.404	NaN	5853.1	30	0	398.27	0.106			+	-1	AFLMPEQK	8	70	490.24791067365436	978.4812684141087	2	490.7520751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_AFLM(Oxidation (M))PEQK_	REV__ENSG00000116747|ENST00000400968|RO60;REV__nc|ENSG00000116747|P10155-2|RO60;REV__nc|ENSG00000116747|P10155-3|RO60;REV__nc|ENSG00000116747|P10155-4|RO60;REV__nc|ENSG00000116747|P10155-5|RO60;REV__TROVE2|p.K316Rfs*10|1|0.16|ENSG00000116747|chr1:193076641-193076641|A/-|frameshift_variant	60.97194046774394	0.49215940876911696	4				NaN	NaN	0	NaN	4355	2736	7091
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7094	21.406	NaN	3301.7	30	0	1041.1	0.106			+	-1	TSLACGVPSLW	11	45	397.53390841892093	1189.5798958569628	3	397.5340270996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_TSLAC(Carbamidomethyl (C))GVPSLW_	REV__ENSG00000159267|ENST00000674895|HLCS;REV__nc|ENSG00000159267|P50747|HLCS	35.17822180527639	0.6208003396870814	4				NaN	NaN	0	NaN	4356	2736	7091
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7095	21.408	NaN	12205	30	0	2240.6	0.106	+			768	AEEPKARVL	9	72	506.792726257923	1011.570899582646	2	506.79302978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEEPKARVL_	CDC25B|p.G524Afs*22|1|0.23|ENSG00000101224|chr20:3804645-3804645|A/-|frameshift_variant;ENSG00000101224|ENST00000245960|CDC25B;ENST00000468979.1_1_20:3782308-3783795:+|nuORF;ENST00000480816.5_1_20:3781734-3783795:+|nuORF;nc|ENSG00000101224|P30305-2|CDC25B;nc|ENSG00000101224|P30305-3|CDC25B;nc|ENSG00000101224|P30305-4|CDC25B	93.19546047674547	0.05585629608842056	4				NaN	NaN	0	NaN	4357	2736	7091
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7096	21.409	NaN	7611.9	30	0	1556.6	0.106	+			45922	VAQRDPIIAK	10	70	555.8350898148365	1109.6556266964728	2	555.8355712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VAQRDPIIAK_	ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC;PRKDC|p.K3681Nfs*6|1|0.32|ENSG00000253729|chr8:47785174-47785177|TTCT/-|frameshift_variant;PRKDC|p.M3670*|1|0.5|ENSG00000253729|chr8:47785212-47785212|T/-|frameshift_variant;PRKDC|p.M3846Cfs*12|1|0.13|ENSG00000253729|chr8:47779047-47779047|T/-|frameshift_variant;PRKDC|p.M4020Cfs*2|1|0.31|ENSG00000253729|chr8:47776968-47776968|T/-|frameshift_variant;PRKDC|p.N3605Kfs*3|1|0.22|ENSG00000253729|chr8:47788993-47788994|-/T|frameshift_variant;PRKDC|p.N4037Ifs*15|1|0.17|ENSG00000253729|chr8:47776916-47776916|T/-|frameshift_variant;PRKDC|p.S3402Ifs*16|1|0.04|ENSG00000253729|chr8:47799302-47799303|-/AAACCGTGAGTTAGAGGAGGTAA|frameshift_variant;PRKDC|p.S4099Qfs*6|1|0.25|ENSG00000253729|chr8:47774265-47774265|A/-|frameshift_variant;PRKDC|p.T3268Pfs*7|1|0.5|ENSG00000253729|chr8:47803426-47803426|T/-|frameshift_variant;PRKDC|p.W3401Cfs*4|1|0.01|ENSG00000253729|chr8:47799304-47799305|-/AATGAATA|frameshift_variant	93.5975768576971	0.11047702954938905	4				NaN	NaN	0	NaN	4358	2736	7091
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7097	21.411	NaN	10458	30	0	3249.9	0.035	+			18908	IVMETGNTK	9	56	496.7571613224996	991.4997697117992	2	496.7575988769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IVMETGNTK_	ENSG00000171566|ENST00000499023|PLRG1;ENST00000506918.1_1_4:155463230-155466996:-|nuORF;nc|ENSG00000171566|O43660-2|PLRG1	120.30596017624542	0.02101454110788768	4				NaN	NaN	0	NaN	4359	2736	7091
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7098	21.412	NaN	7858.2	30	0	2393.2	0.138	+			42771	TEAALDAL	8	58	402.2112728597548	NaN	0	402.2109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TEAALDAL_	THAP7|p.A244T|1|0.12|ENSG00000184436|chr22:21000080-21000080|C/T|missense_variant	33.51558372728122	1.7418937515398478	4				NaN	NaN	0	NaN	4360	2736	7091
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7116	21.451	NaN	4057	30	0	1001.1	0.214	+			1742	AHSLGGLDPA	10	59	469.2399712375955	936.465389541991	2	469.73370361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AHSLGGLDPA_	ENSG00000105738|ENST00000222345|SIPA1L3	44.116797842482775	0.5112108506279902	4				NaN	NaN	0	NaN	4375	2739	7115
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7117	21.455	NaN	6359.4	30	0	800.3	0.106	+			16323	HEKASTPVL	9	62	491.2717271055354	980.5289012778708	2	491.2713928222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HEKASTPVL_	ENSG00000196781|ENST00000376499|TLE1	54.776311868738084	0.25715957988447635	4				NaN	NaN	0	NaN	4376	2739	7115
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7118	21.457	NaN	3092.1	30	0	424.14	0.106			+	22976	KVRKDLAN	8	61	472.2873570989815	NaN	0	472.28729248046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KVRKDLAN_	REV__SF3B1|p.G922D|1|0.35|ENSG00000115524|chr2:197400388-197400388|C/T|missense_variant	65.80317337860623	1.7418937515398478	4				NaN	NaN	0	NaN	4377	2739	7115
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7119	21.459	NaN	6684.8	30	0	1694	0.106			+	19503	KATSIAAP	8	45	379.723795053998	757.433037174796	2	379.72381591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KATSIAAP_	REV__ENSG00000052749|ENST00000370992|RRP12;REV__nc|ENSG00000052749|Q5JTH9-2|RRP12;REV__nc|ENSG00000052749|Q5JTH9-3|RRP12	47.91560031466742	0.6071945918984287	4				NaN	NaN	0	NaN	4378	2739	7115
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7120	21.46	NaN	3418.7	30	0	500.71	0.106	+			50731	YEIPEGPR	8	58	480.74258858239614	959.4706242315923	2	480.7424621582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YEIPEGPR_	ENSG00000138376|ENST00000260947|BARD1;nc|ENSG00000138376|Q99728-2|BARD1;nc|ENSG00000138376|Q99728-3|BARD1	51.33545320467046	0.5859736979383976	4				NaN	NaN	0	NaN	4379	2739	7115
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7121	21.462	NaN	6855.6	30	0	796.77	0.035	+			16324	HEKASTPVL	9	60	491.2717271055354	980.5289012778708	2	491.77294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HEKASTPVL_	ENSG00000196781|ENST00000376499|TLE1	79.71258880314673	0.09879134589249085	4				NaN	NaN	0	NaN	4380	2739	7115
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7122	21.463	NaN	2397.6	30	0	202.92	0.138	+			1665	AGQVAAASPL	10	58	442.7451003277134	NaN	0	442.74493408203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AGQVAAASPL_	ENSG00000109255|ENST00000264218|NMU	34.172542307311794	0.38797011891751465	4				NaN	NaN	0	NaN	4381	2739	7115
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7140	21.502	NaN	21877	30	0	5269.5	0.214	+			22989	KVSDINISK	9	78	502.29272235589104	1002.5708917785821	2	502.292724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVSDINISK_	ENSG00000138193|ENST00000371380|PLCE1;PLCE1|p.A1544Pfs*9|1|0.07|ENSG00000138193|chr10:94273681-94273681|A/-|frameshift_variant;PLCE1|p.E2087Gfs*37|1|0.1|ENSG00000138193|chr10:94316672-94316676|AGAAG/-|frameshift_variant;PLCE1|p.P70Dfs*7|1|0.06|ENSG00000138193|chr10:94031253-94031254|-/GA|frameshift_variant;PLCE1|p.P70Lfs*8|1|0.04|ENSG00000138193|chr10:94031254-94031255|-/TAACA|frameshift_variant	163.83861116171747	0.0038186368322902704	4				NaN	NaN	0	NaN	4396	2742	7139
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7141	21.506	NaN	5241.3	30	0	1548.7	0.106	+			45321	TVSESGTATLK	11	57	547.2906003648035	1092.5666477964069	2	547.2908935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVSESGTATLK_	ENSG00000188112|ENST00000341865|C6orf132;nc|nan|Q5T0Z8-2|C6orf132;nc|nan|Q5T0Z8-4|C6orf132	96.66504779109242	0.07148984068916604	4				NaN	NaN	0	NaN	4397	2742	7139
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7142	21.508	NaN	9967.3	30	0	3117.9	0.106	+			43319	TGANSGQYR	9	56	477.225801105912	952.437049278624	2	477.22589111328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TGANSGQYR_	ENST00000549044.5_1_14:105684030-105684126:-|nuORF	54.776311868738084	0.25715957988447635	4				NaN	NaN	0	NaN	4398	2742	7139
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7143	21.51	NaN	22989	30	0	5911.1	0.106	+			885	AEHIESRTL	9	73	528.277473757299	1054.540394581398	2	528.2779541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEHIESRTL_	ENSG00000147872|ENST00000276914|PLIN2;PLIN2|p.V348*|1|0.15|ENSG00000147872|chr9:19116520-19116520|C/-|frameshift_variant	126.24258497203832	0.01742065577488747	4				NaN	NaN	0	NaN	4399	2742	7139
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7144	21.511	NaN	3555.1	30	0	772.68	0.106	+			48127	VSVNGAVV	8	49	372.7159777457719	743.4174025583438	2	372.716064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSVNGAVV_	ENSG00000178921|ENST00000314666|PFAS	60.29395666154354	0.49887135096048313	4				NaN	NaN	0	NaN	4400	2742	7139
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7145	21.513	NaN	7745.3	30	0	1595	0.034	+			15237	GTSYPVTGR	9	58	469.2399712375955	936.465389541991	2	469.2401123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTSYPVTGR_	ENST00000562374.1_3_16:75656785-75656947:-|nuORF	58.22992032128504	0.22837015374068087	4				NaN	NaN	0	NaN	4401	2742	7139
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7146	21.514	NaN	18231	30	0	4935	0.138	+			5056	ATSGVVAVR	9	61	430.2533255955318	858.4920982578636	2	430.2532653808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATSGVVAVR_	ENSG00000074054|ENST00000696935|CLASP1;nc|ENSG00000074054|Q7Z460-2|CLASP1;nc|ENSG00000074054|Q7Z460-3|CLASP1;nc|ENSG00000074054|Q7Z460-4|CLASP1;nc|ENSG00000074054|Q7Z460-5|CLASP1;nc|ENSG00000074054|Q7Z460|CLASP1	171.38481719736927	0.0025305361306121837	4				NaN	NaN	0	NaN	4402	2742	7139
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7164	21.551	NaN	13848	30	0	3848.6	0.214			+	2767	ARLGLRAE	8	78	443.26671382263686	884.5188747120737	2	443.2666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ARLGLRAE_	REV__ENSG00000013374|ENST00000568733|NUB1;REV__nc|ENSG00000013374|Q9Y5A7-2|NUB1	65.80317337860623	0.44433089765398776	4				NaN	NaN	0	NaN	4417	2745	7163
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7165	21.555	NaN	6205.3	30	0	991.12	0.106	+			34155	RSYSSVIEK	9	66	534.7875297749108	1067.5605066166215	2	534.788330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RSYSSVIEK_	ENSG00000142197|ENST00000691173|DOP1B;nc|ENSG00000142197|Q9Y3R5-2|DOP1B	104.42354056486148	0.0346881550498418	4				NaN	NaN	0	NaN	4418	2745	7163
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7166	21.557	NaN	16329	30	0	2629.4	0.106	+			37013	SIQHVFIKK	9	81	367.2253639193926	1098.6542623583778	3	367.2256164550781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SIQHVFIKK_	ENSG00000128731|ENST00000261609|HERC2	56.43379154798735	0.2433427591689151	4				NaN	NaN	0	NaN	4419	2745	7163
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7167	21.559	NaN	10423	30	0	2031.8	0.106	+			43433	TGLEVWTERDR	11	49	454.5657982107455	1360.6755652324366	3	454.56591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TGLEVWTERDR_	ADAM33|p.A455Pfs*14|1|0.31|ENSG00000149451|chr20:3672575-3672575|C/-|frameshift_variant;ENSG00000149451|ENST00000356518|ADAM33;nc|ENSG00000149451|Q9BZ11-2|ADAM33	37.50817390946774	0.5920388381045607	4				NaN	NaN	0	NaN	4420	2745	7163
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7168	21.561	NaN	5432	30	0	1443.4	0.106	+			25046	LLKDKDPGA	9	62	478.77405546605803	955.5335579989161	2	478.7742004394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LLKDKDPGA_	ENSG00000111077|ENST00000314250|TNS2;ENST00000549311.7_1_12:53443879-53456445:+|nuORF;ENST00000552168.1_1_12:53455573-53455786:+|nuORF;nc|ENSG00000111077|Q63HR2-2|TNS2;nc|ENSG00000111077|Q63HR2-4|TNS2;nc|ENSG00000111077|Q63HR2-5|TNS2;nc|ENSG00000111077|Q63HR2-6|TNS2	79.71258880314673	0.09879134589249085	4				NaN	NaN	0	NaN	4421	2745	7163
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7169	21.563	NaN	10658	30	0	1248.1	0.041			+	-1	LRMMDPHLCYS	11	68	474.8830345353965	NaN	0	474.8829345703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_LRMMDPHLC(Carbamidomethyl (C))YS_	REV__ENSG00000187918|ENST00000641930|OR51I2	41.080066990542036	0.3793850210388171	4				NaN	NaN	0	NaN	4422	2745	7163
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7170	21.563	NaN	4048.7	30	0	1144.2	0.14	+			35751	SDTQQVVVL	9	62	494.76886069544685	987.5231684576937	2	494.7688903808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SDTQQVVVL_	ENSG00000240764|ENST00000252087|PCDHGC5;nc|ENSG00000240764|Q9Y5F6-2|PCDHGC5	44.116797842482775	0.37197099687881774	4				NaN	NaN	0	NaN	4423	2745	7163
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7188	21.601	NaN	166590	30	0	108190	0.214	+			1814	AIFQGKLEKK	10	101	387.9042911590007	1160.6910440772022	3	387.9043273925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AIFQGKLEKK_	ENSG00000118322|ENST00000327245|ATP10B	77.53327743719008	0.21577387331637743	4				NaN	NaN	0	NaN	4438	2748	7187
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7189	21.605	NaN	5500.9	30	0	758.9	0.106	+			8435	EAREEKVVY	9	62	561.7932110780342	1121.5718692228684	2	561.7935180664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EAREEKVVY_	ENSG00000253276|ENST00000523505|CCDC71L;nc|ENSG00000253276|Q8N9Z2-2|CCDC71L	58.22992032128504	0.22837015374068087	4				NaN	NaN	0	NaN	4439	2748	7187
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7190	21.607	NaN	2575.1	30	0	453.39	0.106	+			38428	SSAKPGPAL	9	58	414.2344397893149	826.4543266454298	2	414.2344665527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSAKPGPAL_	ENSG00000186260|ENST00000571589|MRTFB;nc|ENSG00000186260|Q9ULH7-2|MRTFB;nc|ENSG00000186260|Q9ULH7-3|MRTFB;nc|ENSG00000186260|Q9ULH7-4|MRTFB;nc|ENSG00000186260|Q9ULH7|MRTFB	66.42927471994793	0.16001998865088202	4				NaN	NaN	0	NaN	4440	2748	7187
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7191	21.609	NaN	8939	30	0	3590.7	0.106	+			41397	SVMPKKSILK	10	54	377.57018744198535	1129.688732926156	3	377.5703430175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVMPKKSILK_	ENSG00000171467|ENST00000361428|ZNF318;nc|ENSG00000171467|Q5VUA4-2|ZNF318;ZNF318|p.A1247Lfs*13|1|0.36|ENSG00000171467|chr6:43340260-43340260|T/-|frameshift_variant;ZNF318|p.N708Tfs*6|1|0.34|ENSG00000171467|chr6:43355211-43355211|T/-|frameshift_variant;ZNF318|p.P785Lfs*37|1|0.23|ENSG00000171467|chr6:43354980-43354980|G/-|frameshift_variant;ZNF318|p.S508Pfs*4|1|0.19|ENSG00000171467|chr6:43355812-43355812|A/-|frameshift_variant;ZNF318|p.T1649Lfs*8|1|0.04|ENSG00000171467|chr6:43339053-43339054|-/GACACTAG|frameshift_variant;ZNF318|p.T2157Qfs*54|1|0.39|ENSG00000171467|chr6:43337529-43337529|T/-|frameshift_variant	39.873155843976775	0.5503138860789152	4				NaN	NaN	0	NaN	4441	2748	7187
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7192	21.611	NaN	4922	30	0	783.63	0.106			+	37327	SLEEDKKK	8	66	488.7691189036586	975.5236848741172	2	488.76898193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SLEEDKKK_	REV__ENSG00000074319|ENST00000251968|TSG101;REV__ENST00000540555.1_1_11:18503050-18505548:-|nuORF;REV__nc|ENSG00000074319|Q99816-2|TSG101;REV__TSG101|p.M305Nfs*6|1|0.12|ENSG00000074319|chr11:18481799-18481800|-/T|frameshift_variant	94.00642277110589	0.2653416297186628	4				NaN	NaN	0	NaN	4442	2748	7187
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7193	21.612	NaN	1846.1	30	0	371.12	0.036	+			25934	LSHDDPRLP	9	54	525.2719323304065	1048.5293117276128	2	525.2726440429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSHDDPRLP_	ENST00000367833.6_1_1:168148269-168153151:+|nuORF	30.503639358989545	0.5181749237905803	4				NaN	NaN	0	NaN	4443	2748	7187
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7194	21.613	NaN	1518.9	30	0	314.28	0.145	+			24235	LESLCHLCLA	10	34	367.85203562290496	1100.534277468915	3	367.8523254394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LESLCHLCLA_	nc|ENSG00000122783|Q9BWK5-2|CYREN	23.52269567125451	0.6877354443478558	4				NaN	NaN	0	NaN	4444	2748	7187
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7212	21.653	NaN	222890	30	0	54602	0.159	+			39690	STIKFQMKK	9	98	370.88245593510896	1109.6255384055269	3	370.8826904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STIKFQMKK_	ENSG00000198755|ENST00000322203|RPL10A;ENST00000464112.5_1_6:35436546-35438524:+|nuORF;ENST00000472730.1_1_3:61728131-61728755:-|nuORF;ENST00000478340.2_1_6:35437033-35438524:+|nuORF	90.60085204095205	0.06317133949006545	4				NaN	NaN	0	NaN	4459	2751	7211
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7213	21.655	NaN	47550	30	0	8577.7	0.106	+			16150	HEAEPVRTL	9	83	526.2798256348703	1050.5450983365406	2	526.2803955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HEAEPVRTL_	ENSG00000177311|ENST00000321464|ZBTB38	158.07458414430337	0.004987072822166904	4				NaN	NaN	0	NaN	4460	2751	7211
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7214	21.657	NaN	14946	30	0	1370.5	0.106	+			49236	VVNKVPLTGK	10	90	527.8345267415382	1053.6545005498763	2	527.8350219726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVNKVPLTGK_	ENSG00000151135|ENST00000280756|TMEM263	56.632244143249146	0.3964695498866976	4				NaN	NaN	0	NaN	4461	2751	7211
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7215	21.659	NaN	21544	30	0	3539	0.106	+			15291	GTVDCVQAR	9	75	474.73155028981887	947.4485476464378	2	474.73162841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTVDCVQAR_	ENSG00000150593|ENST00000280154|PDCD4;ENST00000489049.5_1_10:112647518-112650449:+|nuORF;nc|ENSG00000150593|Q53EL6-2|PDCD4	127.46168284122857	0.016682644177004526	4				NaN	NaN	0	NaN	4462	2751	7211
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7216	21.661	NaN	2165.5	30	0	361.32	0.106			+	31075	QFEAVKKK	8	54	489.2923783588533	976.5702037845066	2	489.29241943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QFEAVKKK_	REV__DNAH2|p.K4326Rfs*84|3|0.27|ENSG00000183914|chr17:7832920-7832920|C/-|frameshift_variant;REV__DNAH2|p.Q4263Sfs*13|1|0.12|ENSG00000183914|chr17:7832639-7832639|C/-|frameshift_variant;REV__ENSG00000183914|ENST00000572933|DNAH2;REV__nc|ENSG00000183914|Q9P225-2|DNAH2	104.74654710444128	0.24806011021879068	4				NaN	NaN	0	NaN	4463	2751	7211
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7217	21.663	NaN	2536.2	30	0	701.07	0.106	+			16989	HPSGTALHY	9	50	491.7403130540829	981.4660731749658	2	491.7403564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HPSGTALHY_	ENSG00000196526|ENST00000420658|AFAP1;ENST00000513842.1_1_4:7765494-7800689:-|nuORF;nc|ENSG00000196526|Q8N556|AFAP1	38.80614096846853	0.43426287593479557	4				NaN	NaN	0	NaN	4464	2751	7211
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7218	21.664	NaN	3099.4	30	0	442.04	0.034	+			39121	SSTPASVTAI	10	61	467.24790491886165	932.4812569045233	2	467.2478332519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSTPASVTAI_	ENSG00000078699|ENST00000342704|CBFA2T2;nc|ENSG00000078699|O43439-2|CBFA2T2;nc|ENSG00000078699|O43439-4|CBFA2T2;nc|ENSG00000078699|O43439|CBFA2T2	56.72105179125745	0.3956618550748046	4				NaN	NaN	0	NaN	4465	2751	7211
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7236	21.702	NaN	44962	30	0	15416	0.214	+			32986	REELGRLA	8	85	472.2693514754407	942.5241500176814	2	472.2693786621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_REELGRLA_	ENSG00000163661|ENST00000295927|PTX3	66.42927471994793	0.4381325844043345	4				NaN	NaN	0	NaN	4480	2754	7235
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7237	21.706	NaN	2159.6	30	0	470.71	0.106	+			23108	KVVKVTIMK	9	59	523.3433572953287	1044.6721616574573	2	523.3438110351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVVKVTIMK_	ENSG00000139168|ENST00000266529|ZCRB1;ZCRB1|p.K141Efs*4|1|0.29|ENSG00000139168|chr12:42313900-42313901|-/T|frameshift_variant;ZCRB1|p.W185Mfs*13|2|0.39|ENSG00000139168|chr12:42313168-42313169|-/T|frameshift_variant	125.71293069911285	0.017741295328254008	4				NaN	NaN	0	NaN	4481	2754	7235
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7238	21.708	NaN	5551.1	30	0	1041.5	0.106	+			11493	FPASSGVSH	9	61	444.7139613251225	887.413369717045	2	444.7140197753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FPASSGVSH_	ENSG00000160294|ENST00000291688|MCM3AP;MCM3AP|p.K492Efs*5|1|0.29|ENSG00000160294|chr21:46280545-46280546|-/C|frameshift_variant	124.59426212874841	0.018418509520798258	4				NaN	NaN	0	NaN	4482	2754	7235
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7239	21.71	NaN	6096.7	30	0	1329.9	0.106	+			48666	VTSSVSTLK	9	61	461.2659280443233	920.5173031554466	2	461.2659606933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTSSVSTLK_	ENSG00000186260|ENST00000571589|MRTFB;nc|ENSG00000186260|Q9ULH7-4|MRTFB;nc|ENSG00000186260|Q9ULH7|MRTFB	67.49366992349736	0.1516260258713357	4				NaN	NaN	0	NaN	4483	2754	7235
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7240	21.711	NaN	9924.7	30	0	3746.7	0.106	+			3774	ATAEQACKEKL	11	60	397.87241050403	1190.59540211229	3	397.8724670410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATAEQACKEKL_	ENSG00000125844|ENST00000377813|RRBP1;nc|ENSG00000125844|Q9P2E9-3|RRBP1;RRBP1|p.A628Gfs*69|1|0.35|ENSG00000125844|chr20:17621915-17621916|-/T|frameshift_variant	47.227680397652996	0.4590463137409202	4				NaN	NaN	0	NaN	4484	2754	7235
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7241	21.713	NaN	2026.8	30	0	166.01	0.106	+			37759	SLVLELSDS	9	65	481.75580207792655	961.4970512226531	2	481.75567626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLVLELSDS_	ENSG00000101474|ENST00000217456|APMAP	38.80614096846853	0.43426287593479557	4				NaN	NaN	0	NaN	4485	2754	7235
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7242	21.715	NaN	1459.8	30	0	136.64	0.042			+	-1	TRHFYHLCFLG	11	50	484.239132950298	1449.6955694510941	3	484.2389831542969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_TRHFYHLC(Carbamidomethyl (C))FLG_	REV__ENSG00000277893|ENST00000622030|SRD5A2	15.333111300571575	0.7986936308376149	4				NaN	NaN	0	NaN	4486	2754	7235
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7260	21.753	NaN	13600	30	0	2860.5	0.214	+			39207	STADGSALVK	10	75	474.7525340718371	947.4905152104742	2	474.75299072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STADGSALVK_	ENSG00000120699|ENST00000389704|EXOSC8;ENST00000464235.5_1_13:37576413-37578626:+|nuORF;ENST00000490537.6_1_13:37574942-37577165:+|nuORF;EXOSC8|p.N162Mfs*9|1|0.25|ENSG00000120699|chr13:37007064-37007064|A/-|frameshift_variant	88.17693792209575	0.14151128060301246	4				NaN	NaN	0	NaN	4501	2757	7259
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7261	21.756	NaN	3407.3	30	0	421.95	0.106			+	3319	ASLTQKPV	8	54	422.25028757040076	842.4860222076015	2	422.250244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASLTQKPV_	REV__ENSG00000173821|ENST00000582970|RNF213;REV__nc|ENSG00000173821|Q63HN8-4|RNF213;REV__nc|ENSG00000173821|Q63HN8|RNF213;REV__RNF213|p.C5022Lfs*7|1|0.3|ENSG00000173821|chr17:80389237-80389237|G/-|frameshift_variant;REV__RNF213|p.P2167Lfs*64|1|0.09|ENSG00000173821|chr17:80344834-80344835|-/T|frameshift_variant	53.351449002276354	0.5676011784961348	4				NaN	NaN	0	NaN	4502	2757	7259
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7262	21.758	NaN	2472	30	0	437.3	0.106	+			20121	KEKLEAEM	8	58	489.2518540604924	976.4891551877848	2	489.251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEKLEAEM_	ENSG00000121390|ENST00000338910|PSPC1;ENSG00000136824|ENST00000374793|SMC2;ENST00000442352.1_1_13:19782657-19801502:-|nuORF;nc|ENSG00000121390|Q8WXF1-2|PSPC1;nc|ENSG00000136824|O95347-2|SMC2;SMC2|p.T751Pfs*9|3|0.3|ENSG00000136824|chr9:104123220-104123220|A/-|frameshift_variant	90.36981228632155	0.27635063874291205	4				NaN	NaN	0	NaN	4503	2757	7259
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7263	21.76	NaN	2078.3	30	0	235.12	0.106	+			17046	HQAAIIIQK	9	61	511.31093701939335	1020.6073211055867	2	511.31109619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HQAAIIIQK_	ASPM|p.I3229Nfs*2|1|0.48|ENSG00000066279|chr1:197090339-197090340|-/T|frameshift_variant;ENSG00000066279|ENST00000367409|ASPM	93.19546047674547	0.05585629608842056	4				NaN	NaN	0	NaN	4504	2757	7259
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7264	21.762	NaN	28464	30	0	3709.2	0.106	+			44844	TTTGHLIYK	9	73	517.2871093341015	1032.559665735003	2	517.2879028320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TTTGHLIYK_	EEF1A1|p.P263Lfs*27|1|0.36|ENSG00000156508|chr6:73518595-73518595|G/-|frameshift_variant;EEF1A2|p.T239Hfs*50|1|0.26|ENSG00000101210|chr20:63493194-63493195|-/G|frameshift_variant;EEF1A2|p.T239Rfs*40|1|0.31|ENSG00000101210|chr20:63493195-63493195|G/-|frameshift_variant;ENSG00000101210|ENST00000217182|EEF1A2;ENSG00000156508|ENST00000309268|EEF1A1;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	93.19546047674547	0.05585629608842056	4				NaN	NaN	0	NaN	4505	2757	7259
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7265	21.764	NaN	2882.9	30	0	557.41	0.106			+	21964	KSDKASYDT	9	61	507.74096185760516	1013.4673707820103	2	507.74102783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KSDKASYDT_	REV__ENST00000443950.6_1_10:43881425-43881470:-|nuORF	54.776311868738084	0.25715957988447635	4				NaN	NaN	0	NaN	4506	2757	7259
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7266	21.765	NaN	3544.5	30	0	391.08	0.033	+			35776	SEADSHCL	8	67	431.1740759043188	860.3335988754376	2	431.1737365722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SEADSHCL_	ENSG00000198788|ENST00000675028|MUC2;nc|ENSG00000198788|Q02817|MUC2	57.81127852772723	0.5234495074909924	4				NaN	NaN	0	NaN	4507	2757	7259
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7284	21.803	NaN	207160	30	0	39599	0.162				-1	 	0	78	565.9148808020345	1694.7228130063036	3	565.915283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4522	2760	7283
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7285	21.806	NaN	5471.2	30	0	914.24	0.106	+			41935	SVVQSGQLK	9	68	473.2715995261231	944.5286461190462	2	473.271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVVQSGQLK_	ENGASE|p.S611Gfs*22|1|0.26|ENSG00000167280|chr17:79085943-79085950|CTGCCAGC/-|frameshift_variant;ENGASE|p.T547Hfs*45|1|0.16|ENSG00000167280|chr17:79085274-79085275|-/C|frameshift_variant;ENGASE|p.T547Pfs*14|2|0.35|ENSG00000167280|chr17:79085275-79085275|C/-|frameshift_variant;ENSG00000167280|ENST00000579016|ENGASE;nc|ENSG00000167280|Q8NFI3-2|ENGASE;nc|ENSG00000167280|Q8NFI3-3|ENGASE	61.76455937419982	0.19890525308472518	4				NaN	NaN	0	NaN	4523	2760	7283
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7286	21.808	NaN	8542	30	0	906.5	0.106	+			1022	AEKLGGSAV	9	62	416.2319497060218	830.4493464788436	2	416.23193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEKLGGSAV_	ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65622809-65623088:-|nuORF	56.632244143249146	0.24168844994051353	4				NaN	NaN	0	NaN	4524	2760	7283
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7287	21.81	NaN	5911.7	30	0	1439	0.106	+			39019	SSSGTVLSK	9	62	433.23484811686694	864.4551433005339	2	433.2346496582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSSGTVLSK_	ENSG00000145362|ENST00000357077|ANK2	98.62937762414208	0.04060045538121712	4				NaN	NaN	0	NaN	4525	2760	7283
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7288	21.811	NaN	3197.5	30	0	996.9	0.106	+			48960	VVGAVGVGK	9	39	393.24726652399346	784.4799801147869	2	393.2474365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVGAVGVGK_	KRAS|p.G12V|32|0.43|ENSG00000133703|chr12:25245350-25245350|C/A|missense_variant;NRAS|p.G12V|1|0.52|ENSG00000213281|chr1:114716126-114716126|C/A|missense_variant	68.484700416344	0.1473408039581241	4				NaN	NaN	0	NaN	4526	2760	7283
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7289	21.813	NaN	2320.8	30	0	287.22	0.106	+			34550	RVLEAAVAAK	10	56	514.3160583188799	1026.6175637045596	2	514.3165893554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RVLEAAVAAK_	ENSG00000111361|ENST00000424014|EIF2B1;nc|ENSG00000111361|Q14232-2|EIF2B1	65.15724298150197	0.31893571707528906	4				NaN	NaN	0	NaN	4527	2760	7283
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7290	21.815	NaN	3545.2	30	0	550.26	0.034			+	15797	GVVLTVDGPA	10	57	464.26052298928346	926.5064930453669	2	464.2603454589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GVVLTVDGPA_	REV__ENSG00000214309|ENST00000398075|MBLAC1	37.15910966729921	0.575322462179216	4				NaN	NaN	0	NaN	4528	2760	7283
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7309	21.851	NaN	12233	30	0	1589	0.214				-1	 	0	71	589.593548637205	1765.758816511815	3	589.59423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4544	2763	7308
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7310	21.855	NaN	3182.6	30	0	702.47	0.106	+			21985	KSFAESSSLTK	11	65	592.8108319486705	1183.607110964141	2	592.8115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KSFAESSSLTK_	ENSG00000178935|ENST00000391701|ZNF552;ENSG00000204514|ENST00000435989|ZNF814;ENST00000596248.1_1_19:58319410-58325921:-|nuORF;ZNF552|p.F389Ifs*2|1|0.31|ENSG00000178935|chr19:57808099-57808100|-/T|frameshift_variant	103.4299802665834	0.05359611455313024	4				NaN	NaN	0	NaN	4545	2763	7308
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7311	21.857	NaN	2744.3	30	0	580.96	0.106				-1	GTLCLLKVMK	10	51	374.55212623476837	1120.634549304505	3	374.5521545410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_GTLCLLKVM(Oxidation (M))K_	tr|U7T076|U7T076_FUSNUUDP-glucose4-epimeraseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00758PE=3SV=1	41.42661286455405	0.5359995577334734	4				NaN	NaN	0	NaN	4546	2763	7308
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7312	21.859	NaN	6490.3	30	0	1968.3	0.106	+			27399	MKRALMMMK	9	44	380.5365786280935	NaN	0	380.53656005859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MKRALMMMK_	ENSG00000275342|ENST00000615670|PRAG1	54.776311868738084	0.17377682019723872	4				NaN	NaN	0	NaN	4547	2763	7308
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7313	21.86	NaN	12178	30	0	3927.7	0.106	+			40286	STSRLRRWW	9	56	416.5627694175112	1246.6664788527337	3	416.5625915527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STSRLRRWW_	ENST00000368608.3_1_6:116599484-116599676:-|nuORF	19.359975847455235	0.6112419832031293	4				NaN	NaN	0	NaN	4548	2763	7308
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7314	21.862	NaN	1883.6	30	0	236.74	0.035	+			51080	YLPPGSRPE	9	62	508.26261571331673	NaN	0	508.2821960449219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YLPPGSRPE_	ENST00000378169.7_1_1:5965468-6021937:-|nuORF;ENST00000478423.6_1_1:5965468-6029316:-|nuORF	49.536043120802724	0.20989033510253738	4				NaN	NaN	0	NaN	4549	2763	7308
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7315	21.863	NaN	987.61	30	0	157.55	0.139			+	21023	KKITMDPGS	9	53	488.760009765625	NaN	0	488.760009765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KKITMDPGS_	REV__nc|ENSG00000157654|Q9Y2D5-6|PALM2AKAP2;REV__nc|ENSG00000157654|Q9Y2D5|PALM2AKAP2	49.44154591367651	0.21054156626303966	4				NaN	NaN	0	NaN	4550	2763	7308
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7333	21.901	NaN	18360	30	0	3604.1	0.214	+			16428	HESDVKIVA	9	76	499.2689663827042	996.5233798322084	2	499.26910400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HESDVKIVA_	ENSG00000165238|ENST00000427277|WNK2;nc|ENSG00000165238|Q9Y3S1-2|WNK2;nc|ENSG00000165238|Q9Y3S1-3|WNK2;nc|ENSG00000165238|Q9Y3S1-4|WNK2;nc|ENSG00000165238|Q9Y3S1|WNK2;WNK2|p.S1424Pfs*5|1|0.34|ENSG00000165238|chr9:93288908-93288908|C/-|frameshift_variant;WNK2|p.T1980Lfs*12|2|0.16|ENSG00000165238|chr9:93297965-93297965|C/-|frameshift_variant	120.30596017624542	0.02101454110788768	4				NaN	NaN	0	NaN	4565	2766	7332
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7334	21.904	NaN	217490	30	0	80448	0.106				-1	 	0	88	389.5433621287316	1165.6082569863947	3	389.5434875488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4566	2766	7332
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7335	21.906	NaN	60977	30	0	7354.7	0.106			+	-1	KPMSRLAK	8	98	473.7781088493496	945.5416647654993	2	473.77825927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_KPM(Oxidation (M))SRLAK_	REV__nc|ENSG00000117090|Q13291-4|SLAMF1	54.776311868738084	0.5534952410049249	4				NaN	NaN	0	NaN	4567	2766	7332
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7336	21.908	NaN	9584.6	30	0	1935	0.106	+			36207	SELPAKRL	8	75	457.2765806930332	912.5386084528665	2	457.27667236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SELPAKRL_	CIZ1|p.T876Hfs*5|1|0.4|ENSG00000148337|chr9:128166268-128166268|T/-|frameshift_variant;ENSG00000148337|ENST00000372938|CIZ1;ENST00000476727.6_1_9:130931703-130953136:-|nuORF;nc|ENSG00000148337|Q9ULV3-2|CIZ1;nc|ENSG00000148337|Q9ULV3-3|CIZ1;nc|ENSG00000148337|Q9ULV3-4|CIZ1;nc|ENSG00000148337|Q9ULV3-5|CIZ1	68.484700416344	0.4195245774506064	4				NaN	NaN	0	NaN	4568	2766	7332
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7337	21.91	NaN	4519	30	0	868.12	0.106	+			865	AEHDAVRNAL	10	60	548.2812069638787	NaN	0	548.28125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEHDAVRNAL_	ENSG00000183734|ENST00000331289|ASCL2	68.84614121027924	0.16203925040239886	4				NaN	NaN	0	NaN	4569	2766	7332
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7338	21.912	NaN	12450	30	0	2438.1	0.038				-1	FSVVRRCMK	9	61	394.8787591431093	1181.614448029528	3	394.879150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_FSVVRRC(Carbamidomethyl (C))MK_	ENSG00000145349|ENST00000511664|CAMK2D;ENST00000505132.1_1_4:114680392-114682224:-|nuORF;ENST00000509907.1_1_4:114676199-114682224:-|nuORF;nc|ENSG00000145349|Q13557-10|CAMK2D;nc|ENSG00000145349|Q13557-11|CAMK2D;nc|ENSG00000145349|Q13557-12|CAMK2D;nc|ENSG00000145349|Q13557-3|CAMK2D;nc|ENSG00000145349|Q13557-4|CAMK2D;nc|ENSG00000145349|Q13557-5|CAMK2D;nc|ENSG00000145349|Q13557-6|CAMK2D;nc|ENSG00000145349|Q13557-8|CAMK2D;nc|ENSG00000145349|Q13557-9|CAMK2D;nc|ENSG00000145349|Q13557|CAMK2D	39.252832667884924	0.4290233611298554	4				NaN	NaN	0	NaN	4570	2766	7332
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7339	21.912	NaN	2303.3	30	0	782.81	0.142				-1	CRRCIFAL	8	35	365.8560497461513	1094.546319838654	3	365.85614013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))RRC(Carbamidomethyl (C))IFAL_	ENSG00000119403|ENST00000373896|PHF19;nc|ENSG00000119403|Q5T6S3-2|PHF19	40.5726180659479	0.6527593143185008	4				NaN	NaN	0	NaN	4571	2766	7332
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7357	21.949	NaN	40991	30	0	4874.7	0.214	+			47766	VSGSLQGGLL	10	100	465.7660861176324	929.5176193020649	2	465.76617431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSGSLQGGLL_	ENST00000473501.1_1_3:196755203-196755518:-|nuORF	72.87924865735499	0.25379688738724415	4				NaN	NaN	0	NaN	4586	2769	7356
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7358	21.952	NaN	10969	30	0	1598.3	0.106	+			12234	GASGSFKLNK	10	72	504.77721158514686	1007.5398702370937	2	504.77703857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GASGSFKLNK_	ENSG00000124575|ENST00000244534|H1-3;ENSG00000124610|ENST00000244573|H1-1;ENSG00000168298|ENST00000304218|H1-4;ENSG00000184357|ENST00000331442|H1-5;ENSG00000187837|ENST00000343677|H1-2	159.27591364854348	0.006848530601684873	4				NaN	NaN	0	NaN	4587	2769	7356
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7359	21.954	NaN	12165	30	0	1186.9	0.106				-1	MALCLELLK	9	89	383.53990406656345	1147.5978827998904	3	383.5400695800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term),Carbamidomethyl (C),Oxidation (M)	_(Acetyl (Protein N-term))M(Oxidation (M))ALC(Carbamidomethyl (C))LELLK_	nc|ENSG00000080845|Q9Y2H0-3|DLGAP4	47.95952297671804	0.32689736945648856	4				NaN	NaN	0	NaN	4588	2769	7356
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7360	21.956	NaN	27968	30	0	4892.2	0.106	+			34012	RSIQVDGKTIK	11	97	415.5820095102266	NaN	0	415.5819396972656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RSIQVDGKTIK_	ENSG00000103769|ENST00000261890|RAB11A;ENSG00000185236|ENST00000328024|RAB11B;ENST00000598706.1_1_19:8455252-8465174:+|nuORF;nc|ENSG00000103769|P62491-2|RAB11A;nc|ENSG00000185236|Q15907-2|RAB11B	69.2159832094219	0.14432973555992734	4				NaN	NaN	0	NaN	4589	2769	7356
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7361	21.958	NaN	3636.3	30	0	258.78	0.106			+	16175	HEAKKVEQE	9	70	549.2828093883134	1096.5510658434266	2	549.2833251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HEAKKVEQE_	REV__ENSG00000133422|ENST00000397641|MORC2;REV__ENST00000469915.1_1_22:31332963-31338135:-|nuORF;REV__nc|ENSG00000133422|Q9Y6X9-2|MORC2	87.69643885390035	0.07135982304947239	4				NaN	NaN	0	NaN	4590	2769	7356
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7362	21.96	NaN	6941.1	30	0	1942.4	0.033			+	24967	LLATGVGSK	9	58	423.2580983690793	844.5016438049586	2	423.25799560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LLATGVGSK_	REV__ENSG00000072274|ENST00000360110|TFRC;REV__ENST00000464368.1_1_3:195789435-195792419:-|nuORF	82.24051045832904	0.08786059719216216	4				NaN	NaN	0	NaN	4591	2769	7356
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7363	21.96	NaN	12053	30	0	1762.7	0.141	+			34286	RTLDSVLKK	9	70	353.8886959278825	1058.6442583838475	3	353.8887939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RTLDSVLKK_	ENSG00000174197|ENST00000703841|MGA;MGA|p.D2578Rfs*45|1|0.32|ENSG00000174197|chr15:41762342-41762343|-/A|frameshift_variant;MGA|p.E1249Rfs*25|2|0.28|ENSG00000174197|chr15:41729243-41729244|-/A|frameshift_variant;MGA|p.E1249Rfs*42|1|0.17|ENSG00000174197|chr15:41729244-41729244|A/-|frameshift_variant;MGA|p.L1297Wfs*39|1|0.3|ENSG00000174197|chr15:41734566-41734566|C/-|frameshift_variant;MGA|p.S2228Kfs*5|1|0.33|ENSG00000174197|chr15:41750284-41750285|-/A|frameshift_variant;MGA|p.T1916Qfs*7|1|0.4|ENSG00000174197|chr15:41749350-41749350|A/-|frameshift_variant;nc|ENSG00000174197|Q8IWI9-3|MGA;nc|ENSG00000174197|Q8IWI9|MGA	90.14881205920913	0.06444578693273594	4				NaN	NaN	0	NaN	4592	2769	7356
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7381	21.999	NaN	17218	30	0	3636.5	0.214	+			135	AAGPSCALK	9	73	409.2151392560501	816.4157255789003	2	409.2152404785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAGPSCALK_	ENSG00000125968|ENST00000376112|ID1;ID1|p.G120Afs*20|1|0.38|ENSG00000125968|chr20:31605737-31605737|C/-|frameshift_variant;nc|ENSG00000125968|P41134-2|ID1	62.107414245175825	0.1960472003779324	4				NaN	NaN	0	NaN	4607	2772	7380
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7382	22.002	NaN	16961	30	0	4745.8	0.106	+			20867	KIMKDILEKK	10	86	415.924387362807	1244.751332688621	3	415.9243469238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KIMKDILEKK_	ENSG00000080824|ENST00000216281|HSP90AA1;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1	79.07001860377117	0.20321883041390024	4				NaN	NaN	0	NaN	4608	2772	7380
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7383	22.004	NaN	1445	30	0	178.14	0.106	+			16206	HECASINRI	9	55	550.2689138019408	1098.5232746706815	2	550.2694702148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_HEC(Carbamidomethyl (C))ASINRI_	ENSG00000172531|ENST00000376745|PPP1CA;ENSG00000186298|ENST00000335007|PPP1CC;ENSG00000213639|ENST00000395366|PPP1CB;ENST00000526510.5_1_11:67166008-67168740:-|nuORF;ENST00000532446.5_1_11:67166008-67168991:-|nuORF;nc|ENSG00000172531|P62136-2|PPP1CA;nc|ENSG00000172531|P62136-3|PPP1CA;nc|ENSG00000186298|P36873-2|PPP1CC;PPP1CB|p.E217Rfs*3|1|0.29|ENSG00000213639|chr2:28788708-28788709|-/G|frameshift_variant	63.53385203322761	0.18415635464017938	4				NaN	NaN	0	NaN	4609	2772	7380
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7384	22.006	NaN	2478.4	30	0	407.93	0.106	+			29352	PAAKKSAQL	9	53	457.2765806930332	912.5386084528665	2	457.7776794433594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PAAKKSAQL_	ENSG00000065600|ENST00000261455|PACC1;nc|ENSG00000065600|Q9H813-2|PACC1	24.20275056022122	0.577060078256802	4				NaN	NaN	0	NaN	4610	2772	7380
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7385	22.008	NaN	8134.6	30	0	2638	0.106			+	26685	LVGVRPAE	8	52	420.75040893044854	839.4862649276971	2	420.75018310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LVGVRPAE_	REV__ENST00000394456.9_1_19:6393018-6393183:-|nuORF;REV__ENST00000598607.1_3_19:6393018-6393985:-|nuORF	47.91560031466742	0.6071945918984287	4				NaN	NaN	0	NaN	4611	2772	7380
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7386	22.01	NaN	4916.8	30	0	458.64	0.042				-1	MQFELEVCQLQ	11	63	480.8865309544558	NaN	0	480.88641357421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))QFELEVC(Carbamidomethyl (C))QLQ_	ENSG00000165304|ENST00000298048|MELK;nc|ENSG00000165304|Q14680-2|MELK;nc|ENSG00000165304|Q14680-3|MELK;nc|ENSG00000165304|Q14680-4|MELK;nc|ENSG00000165304|Q14680-5|MELK;nc|ENSG00000165304|Q14680-6|MELK;nc|ENSG00000165304|Q14680-7|MELK;nc|ENSG00000165304|Q14680-8|MELK	35.17822180527639	0.40864158092774266	4				NaN	NaN	0	NaN	4612	2772	7380
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7387	22.01	NaN	7737.9	30	0	3050.5	0.138	+			37860	SNPGGRPAL	9	67	434.73539260711505	867.4562322810301	2	434.7350769042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SNPGGRPAL_	ENSG00000114554|ENST00000393409|PLXNA1;PLXNA1|p.Q1019Rfs*22|3|0.36|ENSG00000114554|chr3:127016548-127016548|C/-|frameshift_variant	64.20726635412375	0.17854274437659667	4				NaN	NaN	0	NaN	4613	2772	7380
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7405	22.047	NaN	17894	30	0	6457.2	0.214	+			4679	ATLSEARLK	9	43	330.1975214198959	987.5707348598878	3	330.1976318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATLSEARLK_	ENSG00000153815|ENST00000537098|CMIP;nc|ENSG00000153815|Q8IY22-2|CMIP;nc|ENSG00000153815|Q8IY22-3|CMIP	45.97224482568171	0.3502073465782774	4				NaN	NaN	0	NaN	4628	2775	7404
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7406	22.051	NaN	61038	30	0	9097.5	0.106				-1	 	0	92	571.918447033941	1712.733511702023	3	571.91943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4629	2775	7404
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7407	22.053	NaN	47904	30	0	19512	0.106	+			1775	AICQWERNK	9	80	402.2008493697217	1203.580718709365	3	402.201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_AIC(Carbamidomethyl (C))QWERNK_	ENSG00000140526|ENST00000352732|ABHD2	60.11826168202944	0.21262886028301267	4				NaN	NaN	0	NaN	4630	2775	7404
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7408	22.055	NaN	34859	30	0	18188	0.106	+			16852	HPESERISM	9	73	543.2553650729503	1084.4961772127006	2	543.25634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HPESERISM_	ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1	107.00750918261382	0.032051501805654005	4				NaN	NaN	0	NaN	4631	2775	7404
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7409	22.057	NaN	9197.3	30	0	1650.1	0.106	+			11414	FLRARSAGPAD	11	62	387.5438497317055	1159.6097197953166	3	387.54388427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FLRARSAGPAD_	ENST00000396863.8_1_20:42295755-42295851:+|nuORF	30.568863376406313	0.6691487505135859	4				NaN	NaN	0	NaN	4632	2775	7404
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7410	22.058	NaN	5251.1	30	0	2017	0.035	+			30785	QEAEAAQRL	9	62	508.26261571331673	NaN	0	508.2620849609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QEAEAAQRL_	ENSG00000105254|ENST00000221855|TBCB;ENST00000392178.8_1_19:36606435-36612715:+|nuORF;ENST00000589308.1_1_19:36606815-36612715:+|nuORF;nc|ENSG00000105254|Q99426-2|TBCB	65.15724298150197	0.1273232316122292	4				NaN	NaN	0	NaN	4633	2775	7404
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7411	22.059	NaN	17245	30	0	5104.8	0.139	+			44670	TTGQVVAMK	9	62	467.75450240050435	933.4944518678087	2	467.7545471191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TTGQVVAMK_	ENSG00000170312|ENST00000395284|CDK1;ENST00000475504.6_1_10:62539923-62545554:+|nuORF;nc|ENSG00000170312|P06493-2|CDK1	159.27591364854348	0.004707062175358555	4				NaN	NaN	0	NaN	4634	2775	7404
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7429	22.096	NaN	14326	30	0	4141.9	0.214	+			3927	ATASPIVAR	9	70	443.2611323869518	884.5077118407036	2	443.26116943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATASPIVAR_	ENSG00000131725|ENST00000254029|WDR44;nc|ENSG00000131725|Q5JSH3-2|WDR44;nc|ENSG00000131725|Q5JSH3-4|WDR44;WDR44|p.N542Mfs*11|2|0.39|ENSG00000131725|chrX:118409575-118409575|A/-|frameshift_variant	104.0567914643314	0.03506238181059741	4				NaN	NaN	0	NaN	4649	2778	7428
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7430	22.099	NaN	1554.4	30	0	209.5	0.106	+			34654	RVQVVGTYR	9	61	539.3115162407615	1076.608479548323	2	539.3121337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RVQVVGTYR_	ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3	89.02883481214508	0.06760336634167786	4				NaN	NaN	0	NaN	4650	2778	7428
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7431	22.101	NaN	7235.4	30	0	5661.4	0.106			+	-1	ICTLPPVSPK	10	47	371.2106395518334	1110.6100892557004	3	371.21087646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_IC(Carbamidomethyl (C))TLPPVSPK_	REV__ZNF778|p.K615Nfs*80|1|0.09|ENSG00000170100|chr16:89228216-89228217|-/TATGAATGTGCTTATTC|frameshift_variant	31.634271133179894	0.6214930414500597	4				NaN	NaN	0	NaN	4651	2778	7428
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7432	22.103	NaN	3267.5	30	0	562.23	0.106	+			5848	AVINEDPNAK	10	56	535.7769823895595	1069.539411845919	2	535.7775268554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVINEDPNAK_	ENSG00000054523|ENST00000676179|KIF1B;nc|ENSG00000054523|O60333-2|KIF1B;nc|ENSG00000054523|O60333-3|KIF1B;nc|ENSG00000054523|O60333-4|KIF1B	96.0336014099291	0.09653029772959643	4				NaN	NaN	0	NaN	4652	2778	7428
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7433	22.105	NaN	2176	30	0	278.86	0.106	+			37274	SLAGNAYALT	10	61	490.7555904163281	979.4966278994563	2	490.7558898925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SLAGNAYALT_	ENSG00000164916|ENST00000328914|FOXK1;nc|ENSG00000164916|P85037-2|FOXK1	41.42661286455405	0.5359995577334734	4				NaN	NaN	0	NaN	4653	2778	7428
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7434	22.107	NaN	13802	30	0	8145	0.035	+			43727	TKVFEIRT	8	48	331.8621869581526	992.564731474658	3	331.86236572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TKVFEIRT_	ENSG00000130755|ENST00000597595|GMFG;ENST00000601731.1_1_19:39819119-39826633:-|nuORF	23.04248740728303	0.7814162927298575	4				NaN	NaN	0	NaN	4654	2778	7428
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7435	22.107	NaN	3577.2	30	0	1462.9	0.139	+			50855	YEVLSDEV	8	56	477.22720130594274	952.4398496786855	2	477.22711181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YEVLSDEV_	ENSG00000103423|ENST00000262375|DNAJA3;nc|ENSG00000103423|Q96EY1-2|DNAJA3	40.5726180659479	0.6527593143185008	4				NaN	NaN	0	NaN	4655	2778	7428
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7453	22.147	NaN	12506	30	0	3225.3	0.214	+			5922	AVLEKQDISDK	11	66	415.8940868892021	1244.6604312678062	3	415.8940734863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVLEKQDISDK_	ENSG00000135932|ENST00000258418|CAB39	52.167168403610894	0.39337392184041037	4				NaN	NaN	0	NaN	4670	2781	7452
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7454	22.15	NaN	5992.5	30	0	2298.2	0.106			+	26250	LSSSLILFR	9	53	345.87790189591203	1034.6118762879362	3	345.8779602050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSSSLILFR_	REV__L1PA3_dup1321|chr2:173527290-173533317:-|1.892281258594111|0.2637255971055219|2.84|482.0|200|1|anti-sense	30.503639358989545	0.5181749237905803	4				NaN	NaN	0	NaN	4671	2781	7452
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7455	22.152	NaN	12024	30	0	2325	0.106	+			2613	AQHSIFADK	9	72	508.76155085309375	1015.5085487729875	2	508.7615661621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AQHSIFADK_	ENST00000468531.1_1_1:32385166-32408168:-|nuORF;ENST00000526960.1_1_1:32385166-32410235:-|nuORF;ENST00000529477.5_1_1:32385166-32403656:-|nuORF	102.0615471778698	0.03709830720253279	4				NaN	NaN	0	NaN	4672	2781	7452
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7456	22.154	NaN	2603.2	30	0	955.94	0.106				-1	CLLCSKRF	8	37	342.84525819851257	1025.5139451957377	3	342.8454284667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_C(Carbamidomethyl (C))LLCSKRF_	ENSG00000170374|ENST00000536324|SP7;nc|ENSG00000170374|Q8TDD2-2|SP7	21.9598887501803	0.7897753010812679	4				NaN	NaN	0	NaN	4673	2781	7452
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7457	22.156	NaN	1353.9	30	0	206.23	0.106			+	47806	VSITEVFF	8	54	471.25054931640625	NaN	0	471.25054931640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSITEVFF_	REV__ENSG00000111300|ENST00000261745|NAA25;REV__NAA25|p.E958Sfs*3|1|0.51|ENSG00000111300|chr12:112029578-112029578|C/-|frameshift_variant	42.47446043378293	1.7418937515398478	4				NaN	NaN	0	NaN	4674	2781	7452
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7458	22.158	NaN	1191.8	30	0	146.88	0.036			+	40192	STRITLLLK	9	41	348.89713617605	1043.66957912835	3	348.89715576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STRITLLLK_	REV__ENST00000376234.7_3_13:101316529-101320909:-|nuORF	25.57405402267927	0.5642445186134241	4				NaN	NaN	0	NaN	4675	2781	7452
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7459	22.158	NaN	1944.8	30	0	201.88	0.145			+	-1	PCSLPKITRQL	11	48	438.2525517408433	1311.7358258227298	3	438.2523193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_PC(Carbamidomethyl (C))SLPKITRQL_	REV__nc|ENSG00000196243|Q96LM1|LINC00615	24.231819034082204	0.7356191775841856	4				NaN	NaN	0	NaN	4676	2781	7452
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7477	22.198	NaN	20258	30	0	4320.6	0.214	+			36591	SGAQPILSK	9	75	450.76007639913763	899.5055998650753	2	450.7608947753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SGAQPILSK_	ENSG00000105355|ENST00000221957|PLIN3;nc|ENSG00000105355|O60664-3|PLIN3;nc|ENSG00000105355|O60664-4|PLIN3	187.50397467658743	0.0005427347354732084	4				NaN	NaN	0	NaN	4691	2784	7476
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7478	22.201	NaN	8651.2	30	0	3174.7	0.106	+			16098	HDFQALALES	10	74	565.7773207868988	1129.5400886405976	2	565.7777099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HDFQALALES_	ENSG00000055917|ENST00000361078|PUM2;ENST00000420234.5_1_2:20508312-20527121:-|nuORF;nc|ENSG00000055917|Q8TB72-2|PUM2;nc|ENSG00000055917|Q8TB72|PUM2	35.15202426646627	0.5927656479315102	4				NaN	NaN	0	NaN	4692	2784	7476
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7479	22.203	NaN	4649.8	30	0	1556.1	0.106			+	30583	QAPGADLGVAP	11	63	498.2611413749798	994.5077298167596	2	498.2612609863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QAPGADLGVAP_	REV__ENST00000414744.2_1_17:26926168-26926465:+|nuORF	44.377184641726394	0.49804979881800077	4				NaN	NaN	0	NaN	4693	2784	7476
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7480	22.205	NaN	4806.7	30	0	1284.8	0.106				-1	CLVWALTM	8	59	505.24581084642205	1008.4770687596441	2	505.24603271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_C(Carbamidomethyl (C))LVWALTM(Oxidation (M))_	ENST00000486260.5_1_1:155170782-155176189:-|nuORF	69.09296820870183	0.4144562040832486	4				NaN	NaN	0	NaN	4694	2784	7476
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7481	22.207	NaN	1352.3	30	0	322.53	0.106	+			32010	QRLIFELA	8	51	495.29365788286543	NaN	0	495.2936096191406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QRLIFELA_	ENST00000409449.5_1_2:201750469-201754005:-|nuORF	38.80614096846853	1.7418937515398478	4				NaN	NaN	0	NaN	4695	2784	7476
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7482	22.209	NaN	3195.6	30	0	812.82	0.034	+			44551	TTAKNVEVT	9	58	481.7613106131888	961.5080682931776	2	481.760986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TTAKNVEVT_	ENSG00000150760|ENST00000623213|DOCK1;nc|ENSG00000150760|Q14185|DOCK1	71.87747018426188	0.13267044672804276	4				NaN	NaN	0	NaN	4696	2784	7476
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7483	22.209	NaN	2138	30	0	412.52	0.139	+			26119	LSPDSIPQK	9	56	492.77140692199396	983.5282609107879	2	492.7711181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSPDSIPQK_	ENST00000343916.7_1_20:61472127-61472319:+|nuORF	35.61828744233558	0.47037581924408073	4				NaN	NaN	0	NaN	4697	2784	7476
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7502	22.247	NaN	160540	30	0	18164	0.181	+			40364	STTTGHLIYK	10	105	560.8029819547584	1119.5914109763166	2	560.8034057617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STTTGHLIYK_	EEF1A1|p.P263Lfs*27|1|0.36|ENSG00000156508|chr6:73518595-73518595|G/-|frameshift_variant;EEF1A2|p.T239Hfs*50|1|0.26|ENSG00000101210|chr20:63493194-63493195|-/G|frameshift_variant;EEF1A2|p.T239Rfs*40|1|0.31|ENSG00000101210|chr20:63493195-63493195|G/-|frameshift_variant;ENSG00000101210|ENST00000217182|EEF1A2;ENSG00000156508|ENST00000309268|EEF1A1;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	120.8684288430529	0.026103207050128037	4				NaN	NaN	0	NaN	4713	2787	7501
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7503	22.25	NaN	14070	30	0	4979	0.106	+			39577	STGNMVISK	9	69	468.74419713477084	935.4738413363417	2	468.74420166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STGNMVISK_	ENSG00000102837|ENST00000219022|OLFM4	145.46060221211434	0.007927189773590037	4				NaN	NaN	0	NaN	4714	2787	7501
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7504	22.252	NaN	5416.4	30	0	2218.5	0.106	+			30575	QANDDARTF	9	62	519.2355722322739	1036.4565915313476	2	519.2359619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QANDDARTF_	ENSG00000181029|ENST00000596148|TRAPPC5	117.81106730687013	0.02252488733980868	4				NaN	NaN	0	NaN	4715	2787	7501
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7505	22.254	NaN	2961.4	30	0	209.02	0.106	+			11590	FPRENKPCI	9	62	552.2882669642617	1102.5619809953232	2	552.288330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FPRENKPCI_	TM2D2|p.L136P|1|0.15|ENSG00000169490|chr8:38993569-38993569|A/G|missense_variant	77.31757898189308	0.1091473830098891	4				NaN	NaN	0	NaN	4716	2787	7501
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7506	22.255	NaN	2750.1	30	0	422.89	0.106			+	-1	REIFANVN	8	61	502.7614827303303	1003.5084125274606	2	502.7614440917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))REIFANVN_	REV__ENSG00000070182|ENST00000644917|SPTB;REV__nc|ENSG00000070182|P11277-3|SPTB;REV__nc|ENSG00000070182|P11277|SPTB;REV__SPTB|p.R1746L|1|0.31|ENSG00000070182|chr14:64772896-64772896|C/A|missense_variant	44.116797842482775	0.6307669463330267	4				NaN	NaN	0	NaN	4717	2787	7501
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7507	22.257	NaN	3940.6	30	0	1462.7	0.106	+			22695	KVAIKIISK	9	45	333.902140639849	998.684592519747	3	333.9021911621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KVAIKIISK_	ENSG00000183765|ENST00000404276|CHEK2;ENST00000439346.5_1_22:29095780-29107983:-|nuORF;nc|ENSG00000183765|O96017-12|CHEK2;nc|ENSG00000183765|O96017-13|CHEK2;nc|ENSG00000183765|O96017-4|CHEK2;nc|ENSG00000183765|O96017-7|CHEK2;nc|ENSG00000183765|O96017-8|CHEK2;nc|ENSG00000183765|O96017-9|CHEK2	72.87924865735499	0.12833875048249987	4				NaN	NaN	0	NaN	4718	2787	7501
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7508	22.259	NaN	2484.6	30	0	508.8	0.036			+	7637	DKLDEHNIE	9	52	556.7631277368458	1111.5117025404916	2	556.76318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DKLDEHNIE_	REV__ENSG00000127481|ENST00000375254|UBR4;REV__nc|ENSG00000127481|Q5T4S7-2|UBR4;REV__nc|ENSG00000127481|Q5T4S7-3|UBR4;REV__nc|ENSG00000127481|Q5T4S7-4|UBR4;REV__UBR4|p.C4515Wfs*2|1|0.06|ENSG00000127481|chr1:19095626-19095626|G/-|frameshift_variant;REV__UBR4|p.L4771Cfs*7|1|0.25|ENSG00000127481|chr1:19088878-19088878|G/-|frameshift_variant;REV__UBR4|p.P4047Ifs*4|1|0.4|ENSG00000127481|chr1:19106932-19106933|GG/-|frameshift_variant	42.396135135203025	0.392153681582562	4				NaN	NaN	0	NaN	4719	2787	7501
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7526	22.296	NaN	9985.2	30	0	1701.4	0.214	+			46201	VEAEKQAAL	9	67	479.7635051939801	957.5124574547602	2	479.7634582519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VEAEKQAAL_	ENSG00000143850|ENST00000272203|PLEKHA6;PLEKHA6|p.D852Tfs*20|1|0.44|ENSG00000143850|chr1:204230443-204230443|G/-|frameshift_variant	78.26377905018397	0.10505600812668463	4				NaN	NaN	0	NaN	4734	2790	7525
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7527	22.299	NaN	19349	30	0	6409.2	0.106	+			14207	GSSEPITVK	9	66	459.25035610979853	916.4861592863971	2	459.25030517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSSEPITVK_	ENSG00000066044|ENST00000407627|ELAVL1;nc|ENSG00000066044|Q15717-2|ELAVL1	93.1432384553994	0.056003526918089595	4				NaN	NaN	0	NaN	4735	2790	7525
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7528	22.301	NaN	8231.6	30	0	4708.8	0.106	+			35230	SALEEYTKK	9	50	356.8571065046573	1067.549490114172	3	356.8572082519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SALEEYTKK_	ENSG00000118137|ENST00000236850|APOA1	29.170058357718403	0.5306379469863586	4				NaN	NaN	0	NaN	4736	2790	7525
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7529	22.303	NaN	15558	30	0	10879	0.106				-1	KKHRCIFL	8	55	367.8838471354635	1100.6297120065906	3	367.884033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_KKHRC(Carbamidomethyl (C))IFL_	DNAH11|p.M199Hfs*42|1|0.05|ENSG00000105877|chr7:21558898-21558899|-/AACAT|frameshift_variant	25.450171626174864	0.7628259754767981	4				NaN	NaN	0	NaN	4737	2790	7525
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7530	22.305	NaN	7693.3	30	0	1130.8	0.106			+	22596	KTTFRLAN	8	64	475.77426469698753	949.5339764607751	2	475.77435302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KTTFRLAN_	REV__ENSG00000197872|ENST00000381323|CYRIA	66.42927471994793	0.4381325844043345	4				NaN	NaN	0	NaN	4738	2790	7525
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7531	22.307	NaN	2348.9	30	0	315.28	0.106			+	3245	ASLGAKQL	8	50	394.2371349736871	786.4597170141742	2	394.2371826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASLGAKQL_	REV__ENSG00000124615|ENST00000340692|MOCS1;REV__nc|ENSG00000124615|Q9NZB8-2|MOCS1;REV__nc|ENSG00000124615|Q9NZB8-3|MOCS1;REV__nc|ENSG00000124615|Q9NZB8-4|MOCS1;REV__nc|ENSG00000124615|Q9NZB8-5|MOCS1;REV__nc|ENSG00000124615|Q9NZB8-6|MOCS1;REV__nc|ENSG00000124615|Q9NZB8-7|MOCS1;REV__nc|ENSG00000124615|Q9NZB8-8|MOCS1	65.80317337860623	0.44433089765398776	4				NaN	NaN	0	NaN	4739	2790	7525
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7532	22.308	NaN	2383.6	30	0	188.03	0.034			+	23903	LDKLSASKI	9	60	487.79738298968573	973.5802130461715	2	487.78857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LDKLSASKI_	REV__ENSG00000150477|ENST00000280020|KIAA1328;REV__nc|ENSG00000150477|Q86T90-2|KIAA1328	49.536043120802724	0.308405419312776	4				NaN	NaN	0	NaN	4740	2790	7525
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7550	22.343	NaN	5668.6	30	0	1697.3	0.214	+			12388	GDYKTIAK	8	60	448.2475353772123	894.4805178212246	2	448.2474365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GDYKTIAK_	ENSG00000097033|ENST00000370558|SH3GLB1;nc|ENSG00000097033|Q9Y371-2|SH3GLB1;nc|ENSG00000097033|Q9Y371-3|SH3GLB1	52.936696900407355	0.5717071646657654	4				NaN	NaN	0	NaN	4755	2793	7549
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7551	22.347	NaN	5750.7	30	0	1290.8	0.106	+			32937	REAPERPSL	9	70	527.7854676743971	1053.556382415594	2	527.7855224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_REAPERPSL_	ENSG00000107672|ENST00000369023|NSMCE4A;ENST00000489266.5_1_10:123734227-123734680:-|nuORF;nc|ENSG00000107672|Q9NXX6-2|NSMCE4A	74.1650062923329	0.12277912660386392	4				NaN	NaN	0	NaN	4756	2793	7549
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7552	22.349	NaN	18411	30	0	4885.3	0.106				-1	TAAVFFGCAFI	11	68	401.8656340341518	NaN	0	401.8655700683594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_TAAVFFGC(Carbamidomethyl (C))AFI_	ENSG00000138613|ENST00000261879|APH1B;nc|ENSG00000138613|Q8WW43-2|APH1B	38.753607047826485	0.39270760338352134	4				NaN	NaN	0	NaN	4757	2793	7549
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7553	22.351	NaN	2368.7	30	0	589.18	0.106	+			136	AAGPSCALK	9	47	409.2151392560501	816.4157255789003	2	409.2153625488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AAGPSCALK_	ENSG00000125968|ENST00000376112|ID1;ID1|p.G120Afs*20|1|0.38|ENSG00000125968|chr20:31605737-31605737|C/-|frameshift_variant;nc|ENSG00000125968|P41134-2|ID1	32.81241826257853	0.4965981579233955	4				NaN	NaN	0	NaN	4758	2793	7549
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7554	22.353	NaN	3170.5	30	0	475.4	0.106	+			16443	HESPAVKL	8	56	440.7474670410156	NaN	0	440.7474670410156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HESPAVKL_	ENSG00000097046|ENST00000234626|CDC7	68.78682469695295	1.7418937515398478	4				NaN	NaN	0	NaN	4759	2793	7549
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7555	22.354	NaN	1909	30	0	761.45	0.036	+			45154	TVLSKRKLT	9	34	349.2289123535156	NaN	0	349.2289123535156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TVLSKRKLT_	ENSG00000136628|ENST00000366923|EPRS1	20.94693142431847	0.3660861156085067	4				NaN	NaN	0	NaN	4760	2793	7549
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7556	22.355	NaN	3117.4	30	0	255.25	0.14	+			46278	VEHPAAKVL	9	58	482.2843944270585	962.554235920917	2	482.2842712402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VEHPAAKVL_	ENSG00000120438|ENST00000321394|TCP1;ENST00000412860.1_1_7:42834686-42835559:+|nuORF;ENST00000538128.5_2_6:160206507-160210586:-|nuORF;ENST00000543532.5_1_6:160205081-160210626:-|nuORF;ENST00000544255.5_1_6:160205081-160210586:-|nuORF;TCP1|p.A232Gfs*7|1|0.05|ENSG00000120438|chr6:159784043-159784044|-/C|frameshift_variant	49.44154591367651	0.3095138337212152	4				NaN	NaN	0	NaN	4761	2793	7549
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7574	22.394	NaN	15695	30	0	3687.9	0.214	+			13377	GLASIQPSK	9	70	450.76007639913763	899.5055998650753	2	451.2584228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GLASIQPSK_	ENSG00000167962|ENST00000562103|ZNF598;ENST00000565396.5_1_16:2048964-2050409:-|nuORF;nc|ENSG00000167962|Q86UK7-2|ZNF598;nc|ENSG00000167962|Q86UK7-3|ZNF598;nc|ENSG00000167962|Q86UK7-4|ZNF598;nc|ENSG00000167962|Q86UK7|ZNF598;ZNF598|p.P646Afs*20|1|0.5|ENSG00000167962|chr16:1999075-1999076|-/G|frameshift_variant	45.97224482568171	0.3502073465782774	4				NaN	NaN	0	NaN	4776	2796	7573
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7575	22.398	NaN	3424.3	30	0	690.82	0.106				-1	CLLQPMLL	8	61	473.7588333035359	945.5031136738718	2	473.75848388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_CLLQPM(Oxidation (M))LL_	ENST00000268059.10_1_15:74328231-74328504:+|nuORF	42.47446043378293	0.6409579893742323	4				NaN	NaN	0	NaN	4777	2796	7573
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7576	22.4	NaN	7426.3	30	0	1420	0.106	+			9215	EGSELKKV	8	67	445.25291381646895	888.4912746997379	2	445.2529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EGSELKKV_	ENSG00000154822|ENST00000615277|PLCL2;ENST00000460467.1_1_3:17051216-17052412:+|nuORF;nc|ENSG00000154822|Q9UPR0-2|PLCL2;nc|ENSG00000154822|Q9UPR0-3|PLCL2;PLCL2|p.D812*|1|0.26|ENSG00000154822|chr3:17011774-17011775|-/T|frameshift_variant;PLCL2|p.E599Rfs*11|1|0.38|ENSG00000154822|chr3:17011137-17011137|A/-|frameshift_variant	47.657333605630114	0.6087971902037268	4				NaN	NaN	0	NaN	4778	2796	7573
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7577	22.402	NaN	1790.8	30	0	164.09	0.106			+	8144	EAADLLTLE	9	57	487.75594576205464	973.4973385909093	2	487.7978210449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EAADLLTLE_	REV__ENST00000413452.1_1_2:74185269-74208298:-|nuORF	35.61828744233558	0.47037581924408073	4				NaN	NaN	0	NaN	4779	2796	7573
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7578	22.403	NaN	4997.4	30	0	919.74	0.106	+			35662	SDAELVLGK	9	66	466.25791596410045	930.5012789950009	2	466.2581787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SDAELVLGK_	tr|U7SSW2|U7SSW2_FUSNUS1motifdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01396PE=3SV=1	58.78195531508484	0.22376836668196862	4				NaN	NaN	0	NaN	4780	2796	7573
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7579	22.405	NaN	8279.2	30	0	2113.8	0.106	+			38792	SSMSTALSK	9	60	456.2284238322749	910.4422947313499	2	456.2285461425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSMSTALSK_	nc|ENSG00000138119|Q9NZM1-3|MYOF	134.7655990226056	0.012935733000282069	4				NaN	NaN	0	NaN	4781	2796	7573
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7580	22.407	NaN	2671.5	30	0	747.96	0.035			+	26304	LSVKKPLSQ	9	36	333.8778642922433	998.61176347693	3	333.8781433105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSVKKPLSQ_	REV__ENSG00000111247|ENST00000352618|RAD51AP1;REV__nc|ENSG00000111247|Q96B01|RAD51AP1	30.503639358989545	0.5181749237905803	4				NaN	NaN	0	NaN	4782	2796	7573
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7598	22.444	NaN	27291	30	0	5853.1	0.214	+			33406	RIFAPNHVVAK	11	87	417.9153544675672	1250.7242340029018	3	417.9151611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RIFAPNHVVAK_	ENSG00000105640|ENST00000222247|RPL18A;ENST00000600238.1_1_19:17972170-17973061:+|nuORF;ENST00000602216.1_1_19:17970765-17972392:+|nuORF	79.07001860377117	0.16012584326255155	4				NaN	NaN	0	NaN	4797	2799	7597
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7599	22.448	NaN	2404.9	30	0	259.29	0.106			+	21347	KLYLDMLE	8	60	512.7715477785206	1023.5285426238412	2	513.284912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KLYLDMLE_	REV__ENSG00000166349|ENST00000299440|RAG1;REV__nc|ENSG00000166349|P15918-2|RAG1	50.0245360154114	0.5941082100236891	4				NaN	NaN	0	NaN	4798	2799	7597
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7600	22.45	NaN	3763.4	30	0	699.13	0.106	+			42805	TEAPLNPKA	9	60	470.7582603127908	939.5019676923816	2	470.7579040527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TEAPLNPKA_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000446382.2_1_9:6834760-6835018:+|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000502306.1_1_5:15450853-15451165:+|nuORF;ENST00000567299.1_1_19:9629420-9629708:+|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;nc|ENSG00000204434|Q9BYX7|POTEKP	56.72105179125745	0.24094814563026265	4				NaN	NaN	0	NaN	4799	2799	7597
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7601	22.452	NaN	15372	30	0	2742.5	0.106			+	2957	ASEQLIQSIAK	11	64	396.55916111249815	1186.6556539376945	3	396.5590515136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASEQLIQSIAK_	REV__ENSG00000148356|ENST00000300417|LRSAM1;REV__ENST00000483302.5_1_9:130248105-130265175:+|nuORF;REV__nc|ENSG00000148356|Q6UWE0-2|LRSAM1;REV__nc|ENSG00000148356|Q6UWE0-3|LRSAM1	57.148748479083515	0.34890646465650643	4				NaN	NaN	0	NaN	4800	2799	7597
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7602	22.454	NaN	9238.5	30	0	2591.7	0.106	+			48564	VTPSRLPTEP	10	51	366.20462588352626	1095.5920482507788	3	366.20477294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTPSRLPTEP_	ENSG00000088053|ENST00000310373|GP6;nc|ENSG00000088053|Q9HCN6|GP6	35.61828744233558	0.588957954432594	4				NaN	NaN	0	NaN	4801	2799	7597
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7603	22.455	NaN	2235.2	30	0	284.01	0.034	+			16291	HEGTLVHAV	9	56	481.75576408102097	961.496975228842	2	481.7561340332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HEGTLVHAV_	ENSG00000089154|ENST00000300648|GCN1	82.30502934623384	0.08758161712619916	4				NaN	NaN	0	NaN	4802	2799	7597
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7604	22.456	NaN	969.99	30	0	349.11	0.141				-1	SMSGRGFNIT	10	37	543.2553650729503	1084.4961772127006	2	543.2564086914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_SM(Oxidation (M))SGRGFNIT_	CSMD3|p.A3641Cfs*13|1|0.36|ENSG00000164796|chr8:112228799-112228800|-/A|frameshift_variant;CSMD3|p.F3640Lfs*61|7|0.35|ENSG00000164796|chr8:112228800-112228800|A/-|frameshift_variant;CSMD3|p.G3063Rfs*5|1|0.06|ENSG00000164796|chr8:112287208-112287209|-/G|frameshift_variant;CSMD3|p.L2190Yfs*46|1|0.29|ENSG00000164796|chr8:112341560-112341560|A/-|frameshift_variant;CSMD3|p.S2534Ifs*8|1|0.04|ENSG00000164796|chr8:112314002-112314003|-/GACACTAT|frameshift_variant;ENSG00000164796|ENST00000297405|CSMD3;nc|ENSG00000164796|Q7Z407-2|CSMD3;nc|ENSG00000164796|Q7Z407-3|CSMD3;nc|ENSG00000164796|Q7Z407-4|CSMD3;nc|ENSG00000164796|Q7Z407-5|CSMD3	16.71738777980365	0.7315012293134124	4				NaN	NaN	0	NaN	4803	2799	7597
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7622	22.494	NaN	4581.3	30	0	1057.2	0.214	+			22091	KSMESVMVK	9	58	519.768809730143	1037.5230665270858	2	519.7695922851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSMESVMVK_	ENSG00000181222|ENST00000674977|POLR2A;ENST00000576114.1_1_17:7405853-7406021:+|nuORF;nc|ENSG00000181222|P24928|POLR2A	94.4091291819064	0.0524345700464502	4				NaN	NaN	0	NaN	4818	2802	7621
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7623	22.498	NaN	12386	30	0	1137.8	0.106	+			4473	ATIRNVLREK	10	67	400.57872100611314	1198.7143336185395	3	400.5789794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATIRNVLREK_	ENSG00000241973|ENST00000255882|PI4KA;ENST00000360806.9_2_22:21827645-21842641:-|nuORF;ENST00000450651.5_1_22:21841260-21846319:-|nuORF;ENST00000462560.6_1_22:21830876-21842641:-|nuORF;ENST00000467443.5_1_22:21831964-21846319:-|nuORF;nc|ENSG00000183506|A4QPH2-2|PI4KAP2;nc|ENSG00000183506|A4QPH2-4|PI4KAP2;nc|ENSG00000183506|A4QPH2|PI4KAP2;nc|ENSG00000241973|P42356-2|PI4KA;nc|ENSG00000290425|Q8N8J0|PI4KAP1	53.59686742100583	0.4240759338601513	4				NaN	NaN	0	NaN	4819	2802	7621
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7624	22.5	NaN	7818.3	30	0	2839.9	0.106			+	2705	AQQVKTYH	8	65	487.75594576205464	973.4973385909093	2	487.7561340332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AQQVKTYH_	REV__ENSG00000004766|ENST00000305866|VPS50;REV__ENST00000441602.5_1_7:92883193-92979232:+|nuORF;REV__ENST00000471188.5_1_7:92887656-92969983:+|nuORF;REV__ENST00000495039.1_1_7:92888888-92902105:+|nuORF;REV__nc|ENSG00000004766|Q96JG6-2|VPS50;REV__nc|ENSG00000004766|Q96JG6-3|VPS50	60.97194046774394	0.49215940876911696	4				NaN	NaN	0	NaN	4820	2802	7621
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7625	22.502	NaN	1357.3	30	0	509.89	0.106			+	-1	DFHQALFY	8	43	541.7506872823795	NaN	0	541.7509155273438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))DFHQALFY_	REV__ENSG00000172766|ENST00000379406|NAA16;REV__NAA16|p.R628Ifs*4|1|0.06|ENSG00000172766|chr13:41369218-41369219|-/TTCT|frameshift_variant;REV__NAA16|p.W375L|1|0.18|ENSG00000172766|chr13:41358340-41358340|G/T|missense_variant;REV__nc|ENSG00000172766|Q6N069-2|NAA16;REV__nc|ENSG00000172766|Q6N069-3|NAA16;REV__nc|ENSG00000172766|Q6N069-4|NAA16	21.9598887501803	1.7418937515398478	4				NaN	NaN	0	NaN	4821	2802	7621
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7626	22.504	NaN	1880.3	30	0	292.11	0.106	+			22868	KVKYLSGDI	9	61	511.79733730620563	1021.5801216792113	2	511.79754638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KVKYLSGDI_	ENSG00000123607|ENST00000243344|TTC21B	49.44154591367651	0.3095138337212152	4				NaN	NaN	0	NaN	4822	2802	7621
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7627	22.505	NaN	5562.2	30	0	566.19	0.106			+	43450	TGLSVAAAAV	10	53	430.2478583074507	858.4811636817014	2	430.2486572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TGLSVAAAAV_	REV__ENST00000418609.5_1_4:186508579-186508693:-|nuORF	111.64827973302667	0.04310463411224686	4				NaN	NaN	0	NaN	4823	2802	7621
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7628	22.507	NaN	1032.4	30	0	79.471	0.045				-1	 	0	41	571.9190673828125	NaN	0	571.9190673828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4824	2802	7621
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7646	22.544	NaN	32031	30	0	5581	0.214	+			40997	SVGQTVITK	9	84	466.77408007670624	931.5336072202125	2	466.7740173339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVGQTVITK_	ENSG00000107077|ENST00000381309|KDM4C;nc|ENSG00000293552|Q9H3R0-2|KDM4C	86.88156770896713	0.07365720931774442	4				NaN	NaN	0	NaN	4839	2805	7645
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7647	22.548	NaN	21073	30	0	4195.1	0.106	+			276	AANVGRVV	8	59	393.2348527318004	784.4551525304008	2	393.2348327636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AANVGRVV_	ENSG00000162981|ENST00000295092|LRATD1	79.9392285194092	0.32408006123154964	4				NaN	NaN	0	NaN	4840	2805	7645
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7648	22.55	NaN	4140.4	30	0	558.15	0.106	+			49285	VVQEVVDGK	9	57	486.7715057536478	971.5284585740956	2	486.7713623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVQEVVDGK_	CON__P35900;ENSG00000171431|ENST00000167588|KRT20	61.76455937419982	0.19890525308472518	4				NaN	NaN	0	NaN	4841	2805	7645
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7649	22.551	NaN	4944.2	30	0	554.13	0.106	+			16562	HFELGGDK	8	66	451.7217768964581	901.4290008597162	2	451.7217712402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HFELGGDK_	ENSG00000165502|ENST00000298289|RPL36AL;ENSG00000241343|ENST00000553110|RPL36A;ENST00000399253.3_1_X:140233088-140233355:+|nuORF	85.16082228582465	0.29211966821764696	4				NaN	NaN	0	NaN	4842	2805	7645
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7650	22.553	NaN	3253.9	30	0	299.85	0.106	+			37903	SPAQEDGKVY	10	62	547.2615484885833	1092.5085440439666	2	547.2618408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SPAQEDGKVY_	ENSG00000126264|ENST00000246551|HCST	125.71293069911285	0.01926106323661889	4				NaN	NaN	0	NaN	4843	2805	7645
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7651	22.555	NaN	3344.5	30	0	1471.9	0.106			+	-1	GTQCTQKMI	9	36	356.17198247229885	1065.4941180170965	3	356.17205810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_GTQC(Carbamidomethyl (C))TQKMI_	REV__ENST00000530104.2_1_11:111951254-111951290:+|nuORF	24.519189625965996	0.574102787014149	4				NaN	NaN	0	NaN	4844	2805	7645
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7652	22.557	NaN	17848	30	0	7045.8	0.039			+	-1	SVIVPTWRLC	10	50	410.8942307634018	1229.6608628904055	3	410.8942565917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_SVIVPTWRLC(Carbamidomethyl (C))_	REV__ENSG00000083168|ENST00000265713|KAT6A;REV__KAT6A|p.D1243Mfs*51|1|0.24|ENSG00000083168|chr8:41934493-41934493|C/-|frameshift_variant;REV__KAT6A|p.P1694Tfs*13|1|0.25|ENSG00000083168|chr8:41933141-41933142|-/G|frameshift_variant	28.081489160057373	0.6505064946289502	4				NaN	NaN	0	NaN	4845	2805	7645
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7670	22.594	NaN	52200	30	0	22053	0.214	+			45069	TVHNIIVGK	9	83	490.7976345570234	979.5807161808468	2	490.7975769042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVHNIIVGK_	ENSG00000110048|ENST00000263847|OSBP;ENSG00000184792|ENST00000332585|OSBP2;nc|ENSG00000184792|Q969R2-2|OSBP2;nc|ENSG00000184792|Q969R2-3|OSBP2;nc|ENSG00000184792|Q969R2-4|OSBP2;nc|ENSG00000184792|Q969R2-5|OSBP2;nc|ENSG00000184792|Q969R2-6|OSBP2	148.98678547993487	0.0071052929883181565	4				NaN	NaN	0	NaN	4860	2808	7669
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7671	22.597	NaN	52162	30	0	18803	0.106	+			5024	ATSDMDIGK	9	80	469.2179706737863	936.4213884143726	2	469.2180480957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATSDMDIGK_	ENSG00000102158|ENST00000618282|MAGT1	150.36159442982594	0.006784847064083231	4				NaN	NaN	0	NaN	4861	2808	7669
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7672	22.599	NaN	31568	30	0	2482.2	0.106	+			32990	REENKQIAL	9	82	550.8065793176588	1099.5986057021175	2	550.8068237304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_REENKQIAL_	ENSG00000198900|ENST00000361337|TOP1	70.8162118820467	0.13725933411854815	4				NaN	NaN	0	NaN	4862	2808	7669
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7673	22.601	NaN	12155	30	0	1861.7	0.106				-1	RAACFAIQK	9	77	532.7867668877356	1063.558980842271	2	532.787353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_RAAC(Carbamidomethyl (C))FAIQK_	ENSG00000090054|ENST00000262554|SPTLC1;SPTLC1|p.E218Afs*44|1|0.36|ENSG00000090054|chr9:92059215-92059216|CT/-|frameshift_variant	71.87747018426188	0.13267044672804276	4				NaN	NaN	0	NaN	4863	2808	7669
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7674	22.603	NaN	3069.8	30	0	785.63	0.106	+			48715	VTTSDVISK	9	53	475.2635183486887	948.5124837641774	2	475.2634582519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTTSDVISK_	CEP152|p.E1488Ifs*9|1|0.07|ENSG00000103995|chr15:48738920-48738921|-/TAATGAAAGACTTGGTTTAAAAGTAT|frameshift_variant;CEP152|p.E966Ffs*23|1|0.03|ENSG00000103995|chr15:48756352-48756353|-/AGAAGGAGACAGAA|frameshift_variant;CEP152|p.I1277Lfs*20|1|0.2|ENSG00000103995|chr15:48744246-48744246|T/-|frameshift_variant;CEP152|p.L1674Tfs*23|1|0.09|ENSG00000103995|chr15:48738362-48738363|-/T|frameshift_variant;CEP152|p.Q965Lfs*16|1|0.02|ENSG00000103995|chr15:48756354-48756355|-/ACAAACTTGTCTA|frameshift_variant;ENSG00000103995|ENST00000380950|CEP152;nc|ENSG00000103995|O94986-1|CEP152;nc|ENSG00000103995|O94986-2|CEP152;nc|ENSG00000103995|O94986-3|CEP152	42.396135135203025	0.392153681582562	4				NaN	NaN	0	NaN	4864	2808	7669
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7675	22.605	NaN	1385.2	30	0	202.23	0.106	+			21267	KLNEVIVNK	9	55	528.8239470413189	1055.6333411494377	2	528.8245239257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KLNEVIVNK_	ENSG00000140199|ENST00000354181|SLC12A6;nc|ENSG00000140199|Q9UHW9-2|SLC12A6;nc|ENSG00000140199|Q9UHW9-3|SLC12A6;nc|ENSG00000140199|Q9UHW9-4|SLC12A6;nc|ENSG00000140199|Q9UHW9-5|SLC12A6;nc|ENSG00000140199|Q9UHW9-6|SLC12A6	96.0336014099291	0.047854655524928534	4				NaN	NaN	0	NaN	4865	2808	7669
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7676	22.606	NaN	3028.4	30	0	664.3	0.034			+	20401	KETEQPPK	8	63	478.7560146263026	955.4974763194052	2	478.7553405761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KETEQPPK_	REV__ENSG00000141101|ENST00000268802|NOB1;REV__ENST00000502915.1_1_4:139481866-139482694:+|nuORF;REV__ENST00000561677.6_1_16:69782679-69783527:-|nuORF;REV__ENST00000563055.1_1_16:69783106-69788691:-|nuORF	66.42927471994793	0.4381325844043345	4				NaN	NaN	0	NaN	4866	2808	7669
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7691	22.637	NaN	5078.9	30	0	1202.1	0.214	+			16277	HEGIVHDAM	9	63	504.7317144423067	1007.4488759514135	2	504.7318115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HEGIVHDAM_	ENSG00000005810|ENST00000544440|MYCBP2;MYCBP2|p.N3049*|1|0.11|ENSG00000005810|chr13:77097894-77097895|TT/-|frameshift_variant;MYCBP2|p.P4047Qfs*26|2|0.35|ENSG00000005810|chr13:77067782-77067782|G/-|frameshift_variant;MYCBP2|p.T4311Pfs*37|1|0.14|ENSG00000005810|chr13:77059619-77059619|G/-|frameshift_variant;MYCBP2|p.V3749*|1|0.12|ENSG00000005810|chr13:77081486-77081486|C/-|frameshift_variant;nc|ENSG00000005810|O75592-2|MYCBP2	96.19043198914106	0.047412499214244314	4				NaN	NaN	0	NaN	4878	2811	7690
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7692	22.641	NaN	5016.4	30	0	1809.5	0.106			+	-1	NFANMCKR	8	57	500.2287286345861	998.4429043359722	2	500.22894287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_NFANM(Oxidation (M))CKR_	REV__ENST00000394563.4_1_X:85340944-85341022:-|nuORF	25.450171626174864	0.7628259754767981	4				NaN	NaN	0	NaN	4879	2811	7690
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7693	22.643	NaN	3003.1	30	0	1133.3	0.106	+			14393	GTAKVDFLKK	10	47	369.5569600613284	NaN	0	369.55694580078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTAKVDFLKK_	ENSG00000133706|ENST00000394434|LARS1	29.170058357718403	0.40439580130713204	4				NaN	NaN	0	NaN	4880	2811	7690
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7694	22.645	NaN	1594.3	30	0	768.84	0.106	+			35082	SAFQAPAVKK	10	32	349.5378950775859	NaN	0	349.5378723144531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SAFQAPAVKK_	ENSG00000067167|ENST00000262213|TRAM1;nc|ENSG00000067167|Q15629-2|TRAM1	47.227680397652996	0.32312948777114064	4				NaN	NaN	0	NaN	4881	2811	7690
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7695	22.647	NaN	1359.8	30	0	238.23	0.106			+	2021	AKNGPFLTN	9	51	481.25911645725	960.5036799813	2	481.75054931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AKNGPFLTN_	REV__ENST00000515730.1_1_8:87493985-87494276:-|nuORF	39.252832667884924	0.4290233611298554	4				NaN	NaN	0	NaN	4882	2811	7690
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7696	22.648	NaN	2190.4	30	0	351.55	0.106	+			16039	HAVGPSTAM	9	46	435.7104255969998	869.4062982607996	2	435.7101745605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HAVGPSTAM_	ENSG00000196628|ENST00000354452|TCF4;ENST00000562680.5_1_18:52899738-53018213:-|nuORF;nc|ENSG00000196628|P15884-10|TCF4;nc|ENSG00000196628|P15884-11|TCF4;nc|ENSG00000196628|P15884-12|TCF4;nc|ENSG00000196628|P15884-13|TCF4;nc|ENSG00000196628|P15884-14|TCF4;nc|ENSG00000196628|P15884-15|TCF4;nc|ENSG00000196628|P15884-16|TCF4;nc|ENSG00000196628|P15884-2|TCF4;nc|ENSG00000196628|P15884-4|TCF4;nc|ENSG00000196628|P15884-5|TCF4;nc|ENSG00000196628|P15884-6|TCF4;nc|ENSG00000196628|P15884-7|TCF4;nc|ENSG00000196628|P15884-8|TCF4;nc|ENSG00000196628|P15884-9|TCF4;nc|ENSG00000196628|P15884|TCF4;TCF4|p.R401W|1|0.08|ENSG00000196628|chr18:55254646-55254646|G/A|missense_variant	57.81127852772723	0.2318599694398087	4				NaN	NaN	0	NaN	4883	2811	7690
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7697	22.65	NaN	6947.8	30	0	2462.9	0.036			+	12100	GACRAGRRLL	10	54	358.2096185926025	1071.6070263780075	3	358.2095947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GACRAGRRLL_	REV__ENST00000247461.8_1_5:179125991-179132738:+|nuORF;REV__ENST00000507307.5_1_5:179125985-179126592:+|nuORF	51.19269402634007	0.44601001148513897	4				NaN	NaN	0	NaN	4884	2811	7690
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7715	22.687	NaN	33816	30	0	16447	0.214	+			5727	AVFPSRGTELA	11	72	383.2083857910271	1146.6033279732815	3	383.20843505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVFPSRGTELA_	ENST00000317829.12_1_11:94501600-94501720:+|nuORF	42.33807565288922	0.5259510355945483	4				NaN	NaN	0	NaN	4899	2814	7714
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7716	22.69	NaN	6767.9	30	0	1570.2	0.106			+	16788	HPASCNTSL	9	67	465.2108260748721	928.4070992165442	2	465.2105407714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HPASCNTSL_	REV__PLEKHH1|p.P545Rfs*42|1|0.62|ENSG00000054690|chr14:67572178-67572178|C/-|frameshift_variant	69.6276240434122	0.14239879520340665	4				NaN	NaN	0	NaN	4900	2814	7714
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7717	22.693	NaN	4184.9	30	0	377.59	0.106	+			24234	LESKTYHAL	9	68	531.2850584351864	1060.5555639371728	2	531.2858276367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LESKTYHAL_	ENSG00000108671|ENST00000261712|PSMD11;nc|ENSG00000108671|O00231-2|PSMD11;PSMD11|p.P204Lfs*48|2|0.42|ENSG00000108671|chr17:32469156-32469156|C/-|frameshift_variant	77.31757898189308	0.1091473830098891	4				NaN	NaN	0	NaN	4901	2814	7714
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7718	22.694	NaN	4303.2	30	0	648.78	0.106	+			6135	AVQDRRVFLK	10	61	411.24684630039525	1230.7187095013858	3	411.2469787597656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVQDRRVFLK_	ENST00000368875.6_2_1:151298654-151299818:-|nuORF	28.081489160057373	0.6505064946289502	4				NaN	NaN	0	NaN	4902	2814	7714
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7719	22.696	NaN	72545	30	0	8827.4	0.106	+			4464	ATIQGAYAR	9	103	475.7559938522187	949.4974347712374	2	476.2721862792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATIQGAYAR_	ENSG00000109736|ENST00000355443|MFSD10;ENST00000508276.1_1_4:2933242-2933551:-|nuORF;ENST00000514031.5_1_4:2932567-2933551:-|nuORF	124.08010499294276	0.018729767491916592	4				NaN	NaN	0	NaN	4903	2814	7714
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7720	22.698	NaN	1278.9	30	0	111.53	0.033			+	42708	TDDLKVAN	8	51	438.22723388671875	NaN	0	438.22723388671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TDDLKVAN_	REV__DNAJC7|p.N369Mfs*6|3|0.26|ENSG00000168259|chr17:41982380-41982380|T/-|frameshift_variant;REV__ENSG00000168259|ENST00000457167|DNAJC7;REV__nc|ENSG00000168259|Q99615-2|DNAJC7	42.47446043378293	1.7418937515398478	4				NaN	NaN	0	NaN	4904	2814	7714
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7721	22.699	NaN	6365.8	30	0	1204.4	0.139				-1	KTCEKLGQ	8	68	482.249657549965	962.48476216673	2	482.2503662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_KTC(Carbamidomethyl (C))EKLGQ_	ENSG00000198814|ENST00000427190|GK;ENSG00000229894|ENST00000505354|GK3;ENST00000328462.7_1_X:101035000-101035489:-|nuORF;ENST00000505994.1_1_4:120314876-120316112:-|nuORF;GK|p.N133Kfs*7|1|0.03|ENSG00000198814|chrX:30691180-30691181|-/AAAAACTTCATTTAAA|frameshift_variant;nc|ENSG00000198814|P32189-1|GK;nc|ENSG00000198814|P32189-2|GK;nc|ENSG00000198814|P32189-4|GK	67.49366992349736	0.4277823096851425	4				NaN	NaN	0	NaN	4905	2814	7714
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7739	22.738	NaN	518250	30	0	74477	0.135	+			4465	ATIQGAYAR	9	95	475.7559938522187	949.4974347712374	2	475.75616455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATIQGAYAR_	ENSG00000109736|ENST00000355443|MFSD10;ENST00000508276.1_1_4:2933242-2933551:-|nuORF;ENST00000514031.5_1_4:2932567-2933551:-|nuORF	167.22876102047192	0.0032399547248545047	4				NaN	NaN	0	NaN	4920	2817	7738
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7740	22.74	NaN	43009	30	0	17494	0.106	+			22438	KTLDQAKAVLK	11	89	405.5869756962712	1213.7390976890138	3	405.5870056152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTLDQAKAVLK_	ENSG00000135372|ENST00000257829|NAT10;nc|ENSG00000135372|Q9H0A0-2|NAT10	108.31271852315183	0.04350174712075085	4				NaN	NaN	0	NaN	4921	2817	7738
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7741	22.742	NaN	8198.2	30	0	2273.8	0.106			+	6482	AVYREVLAVK	10	45	383.2324828901184	1146.6756192705552	3	383.23260498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVYREVLAVK_	REV__ENSG00000187609|ENST00000340951|EXD3;REV__nc|ENSG00000187609|Q8N9H8-4|EXD3	27.047317107675042	0.6589519614906109	4				NaN	NaN	0	NaN	4922	2817	7738
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7742	22.744	NaN	4053.6	30	0	1113.8	0.106	+			44371	TSLAGRRMLWA	11	48	421.2334131996421	1260.6784101991263	3	421.2333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TSLAGRRMLWA_	ENST00000392357.1_1_17:80012338-80013241:+|nuORF	30.317721548370564	0.6717830234747728	4				NaN	NaN	0	NaN	4923	2817	7738
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7743	22.746	NaN	2880	30	0	424.1	0.106	+			28213	NAVESGRAL	9	54	458.7457347581683	915.4769165831366	2	458.7457580566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NAVESGRAL_	ENSG00000164951|ENST00000297598|PDP1;nc|ENSG00000164951|Q9P0J1-2|PDP1;PDP1|p.G254Lfs*70|1|0.09|ENSG00000164951|chr8:93922816-93922817|-/TT|frameshift_variant	66.96192283764107	0.15557981141143568	4				NaN	NaN	0	NaN	4924	2817	7738
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7744	22.748	NaN	4290.7	30	0	790.18	0.106	+			21607	KPMGKVVTY	9	60	511.7884191998867	1021.5622854665734	2	511.7893371582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KPMGKVVTY_	ENSG00000108828|ENST00000355653|VAT1;nc|ENSG00000108828|Q99536-2|VAT1;nc|ENSG00000108828|Q99536-3|VAT1	71.87747018426188	0.13267044672804276	4				NaN	NaN	0	NaN	4925	2817	7738
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7745	22.749	NaN	32513	30	0	15532	0.039	+			36973	SIMKWNRER	9	77	407.21675818778556	1218.6284451635568	3	407.217041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SIMKWNRER_	ENSG00000186010|ENST00000507754|NDUFA13;ENST00000511584.2_1_19:19627047-19637070:+|nuORF;ENST00000586674.1_1_19:19627047-19643527:+|nuORF;nc|ENSG00000186010|Q9P0J0-2|NDUFA13	51.52775601994872	0.28504342437107444	4				NaN	NaN	0	NaN	4926	2817	7738
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7763	22.787	NaN	10117	30	0	1484.5	0.214	+			13808	GQNIAVVGK	9	62	443.2610676513012	NaN	0	443.2608947753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GQNIAVVGK_	ENSG00000107036|ENST00000414202|RIC1;nc|ENSG00000107036|Q4ADV7-2|RIC1;RIC1|p.M978Ifs*8|1|0.04|ENSG00000107036|chr9:5765505-5765506|-/TTGGGAA|frameshift_variant;RIC1|p.M978Nfs*6|1|0.04|ENSG00000107036|chr9:5765503-5765504|-/A|frameshift_variant	176.41073772950895	0.005989933190698762	4				NaN	NaN	0	NaN	4941	2820	7762
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7764	22.791	NaN	2982	30	0	293.23	0.106			+	-1	TVCLMLHF	8	56	490.24059598545864	978.4666390377173	2	490.2406311035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_TVCLM(Oxidation (M))LHF_	REV__nc|ENSG00000049247|O95399-2|UTS2	44.53106598305862	0.628196326904373	4				NaN	NaN	0	NaN	4942	2820	7762
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7765	22.793	NaN	4737.1	30	0	579.14	0.106	+			3545	ASSVVGITGM	10	68	461.2389299351067	920.4633069370134	2	461.2387390136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASSVVGITGM_	ENST00000593062.5_1_19:39109833-39121488:+|nuORF	49.44154591367651	0.46214596422418036	4				NaN	NaN	0	NaN	4943	2820	7762
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7766	22.795	NaN	2141.1	30	0	256.61	0.106			+	34675	RVSGALKVH	9	62	483.79562101411324	965.5766890950265	2	483.7954406738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RVSGALKVH_	REV__ENST00000274137.9_1_5:1816033-1816159:+|nuORF	45.02220120713402	0.3613509778819777	4				NaN	NaN	0	NaN	4944	2820	7762
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7767	22.796	NaN	2329.6	30	0	801.73	0.106			+	-1	HTHTDPCCI	9	53	570.7319702301874	1139.4493875271746	2	570.7325439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C)	_HTHTDPC(Carbamidomethyl (C))C(Carbamidomethyl (C))I_	REV__ENST00000398484.6_1_4:1019594-1019900:+|nuORF	30.503639358989545	0.5181749237905803	4				NaN	NaN	0	NaN	4945	2820	7762
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7768	22.798	NaN	1090.7	30	0	140.62	0.036				-1	TPCSDPERK	9	46	545.2537231445312	NaN	0	545.2537231445312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_TPC(Carbamidomethyl (C))SDPERK_	ENSG00000149929|ENST00000279392|HIRIP3;ENST00000563053.1_1_16:30005092-30006861:-|nuORF;ENST00000563680.1_1_16:30004959-30006553:-|nuORF;ENST00000565996.1_1_16:30006421-30006926:-|nuORF;nc|ENSG00000149929|Q9BW71-2|HIRIP3;nc|ENSG00000149929|Q9BW71-3|HIRIP3	20.94693142431847	0.3660861156085067	4				NaN	NaN	0	NaN	4946	2820	7762
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7769	22.799	NaN	3177	30	0	1019.5	0.14	+			39195	STAAATVLK	9	53	431.2556250691184	860.4966972050369	2	431.2551574707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STAAATVLK_	ENSG00000158411|ENST00000289359|MITD1	51.19269402634007	0.2889735674168909	4				NaN	NaN	0	NaN	4947	2820	7762
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7787	22.838	NaN	9402.6	30	0	2062.5	0.214	+			10768	FAGDDAPRA	9	65	460.2169952851081	918.4194376370162	2	460.21673583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FAGDDAPRA_	ACTA1|p.G22D|1|0.25|ENSG00000143632|chr1:229433051-229433051|C/T|missense_variant;ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196604|ENST00000409914|POTEF;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000473016.1_1_2:74120109-74129648:+|nuORF;ENST00000477812.1_1_7:5569027-5569288:-|nuORF;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000482085.1_1_10:90708534-90712518:-|nuORF;ENST00000488967.5_1_10:90706975-90712518:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;POTEE|p.N792Kfs*34|1|0.2|ENSG00000188219|chr2:131263828-131263829|-/A|frameshift_variant	110.11987700582712	0.028875675806141952	4				NaN	NaN	0	NaN	4962	2823	7786
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7788	22.842	NaN	9027.6	30	0	3378.2	0.106	+			16910	HPLEGTHEL	9	63	516.7597122835971	1031.504871633994	2	516.7593994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HPLEGTHEL_	ENSG00000122299|ENST00000355758|ZC3H7A;ENST00000571676.5_1_16:11858892-11864657:-|nuORF;ZC3H7A|p.I490Yfs*41|2|0.18|ENSG00000122299|chr16:11767471-11767471|T/-|frameshift_variant	60.97194046774394	0.20551255781574032	4				NaN	NaN	0	NaN	4963	2823	7786
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7789	22.844	NaN	2960.8	30	0	462.69	0.106	+			32880	RDIEVQKM	8	60	509.7710349353284	1017.5275169374568	2	509.7712707519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RDIEVQKM_	nc|ENSG00000110841|Q86W92-3|PPFIBP1;nc|ENSG00000110841|Q86W92-4|PPFIBP1;nc|ENSG00000110841|Q86W92|PPFIBP1	40.05817265558897	0.6559515544096944	4				NaN	NaN	0	NaN	4964	2823	7786
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7790	22.846	NaN	32639	30	0	4062.7	0.106	+			33414	RIGNFIVKK	9	97	358.8974100423782	1073.6704007273347	3	358.8976135253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RIGNFIVKK_	ENSG00000140263|ENST00000267814|SORD;nc|ENSG00000140263|Q00796-2|SORD	68.78682469695295	0.14603441672067394	4				NaN	NaN	0	NaN	4965	2823	7786
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7791	22.847	NaN	2732.5	30	0	621.76	0.106	+			11741	FSGRSGGL	8	49	390.7035068332984	779.3924607333968	2	390.70355224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FSGRSGGL_	ENST00000246174.6_2_X:101856417-101857057:+|nuORF	71.29570347882199	0.39610197767395533	4				NaN	NaN	0	NaN	4966	2823	7786
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7792	22.849	NaN	8001.2	30	0	901.16	0.036			+	31413	QKLLFAARK	9	78	537.8427472236098	1073.6709415140194	2	537.8433227539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QKLLFAARK_	REV__ENSG00000130559|ENST00000389532|CAMSAP1;REV__ENST00000483991.5_1_9:138703157-138717996:-|nuORF;REV__nc|ENSG00000130559|Q5T5Y3-2|CAMSAP1;REV__nc|ENSG00000130559|Q5T5Y3-3|CAMSAP1	79.45101966838831	0.09992237243120712	4				NaN	NaN	0	NaN	4967	2823	7786
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7793	22.85	NaN	4800.1	30	0	1403.4	0.146	+			572	ADHTYNIIEY	10	45	413.52676250339147	1237.5584581103744	3	413.86102294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ADHTYNIIEY_	tr|U7T0A2|U7T0A2_FUSNUPhosphate:Na+symporterOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00913PE=4SV=1	23.52269567125451	0.6877354443478558	4				NaN	NaN	0	NaN	4968	2823	7786
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7811	22.888	NaN	15232	30	0	2692	0.215	+			33095	RELDGRTL	8	68	480.2668542584943	958.5191555837886	2	480.2668762207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RELDGRTL_	ENSG00000112081|ENST00000373715|SRSF3;nc|ENSG00000112081|P84103-2|SRSF3	51.19269402634007	0.5868595481438337	4				NaN	NaN	0	NaN	4983	2826	7810
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7812	22.892	NaN	3925.6	30	0	1015.8	0.106	+			62	AAASGGLLK	9	52	394.2372034131301	786.4598538930602	2	394.2371826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAASGGLLK_	ENSG00000175073|ENST00000310421|VCPIP1;VCPIP1|p.A460Qfs*2|1|0.36|ENSG00000175073|chr8:66665582-66665582|T/-|frameshift_variant;VCPIP1|p.K1108Nfs*37|1|0.15|ENSG00000175073|chr8:66634846-66634846|T/-|frameshift_variant	101.60071028292904	0.0375685401170269	4				NaN	NaN	0	NaN	4984	2826	7810
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7813	22.894	NaN	10996	30	0	1940.3	0.106	+			19898	KEFDGKSL	8	66	462.245673376466	922.476793819732	2	462.2451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEFDGKSL_	ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;ENST00000517330.1_1_5:77337712-77337985:-|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P;nc|ENSG00000205940|Q58FF8|HSP90AB2P;nc|ENSG00000282100|Q58FF6|HSP90AB4P	118.74307786436346	0.2363524257139583	4				NaN	NaN	0	NaN	4985	2826	7810
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7814	22.896	NaN	3043.6	30	0	626.29	0.106	+			22744	KVCNPIITK	9	64	508.3020789599381	1014.5896049866762	2	508.30206298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KVCNPIITK_	ENSG00000109971|ENST00000534624|HSPA8	120.30596017624542	0.02101454110788768	4				NaN	NaN	0	NaN	4986	2826	7810
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7815	22.897	NaN	7188.7	30	0	868.36	0.106	+			16664	HIIATSKSL	9	74	485.2898323337456	968.5651117342912	2	485.289794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HIIATSKSL_	ENSG00000105856|ENST00000222574|HBP1;nc|ENSG00000105856|O60381-2|HBP1;nc|ENSG00000105856|O60381-3|HBP1	118.74307786436346	0.02196067127630568	4				NaN	NaN	0	NaN	4987	2826	7810
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7816	22.899	NaN	3686.6	30	0	1208.2	0.106				-1	 	0	46	454.2581923060028	453.2509158394028	1	454.2581481933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4988	2826	7810
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7817	22.901	NaN	3152	30	0	1039.3	0.036	+			32941	REAQVNVRM	9	67	551.7927148921109	1101.5708768510217	2	551.7927856445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_REAQVNVRM_	ENSG00000054118|ENST00000354618|THRAP3;THRAP3|p.T757Nfs*6|1|0.18|ENSG00000054118|chr1:36296730-36296731|-/A|frameshift_variant	51.52775601994872	0.28504342437107444	4				NaN	NaN	0	NaN	4989	2826	7810
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7835	22.938	NaN	7920.2	30	0	1894.7	0.214	+			44088	TPTKTYGM	8	66	449.720331581054	897.426110228908	2	449.7204895019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TPTKTYGM_	ENSG00000109814|ENST00000316423|UGDH;UGDH|p.M432Nfs*20|1|0.29|ENSG00000109814|chr4:39503954-39503955|-/T|frameshift_variant;UGDH|p.V371Yfs*6|1|0.34|ENSG00000109814|chr4:39505298-39505298|T/-|frameshift_variant	118.74307786436346	0.2363524257139583	4				NaN	NaN	0	NaN	5004	2829	7834
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7836	22.941	NaN	4611.7	30	0	795.04	0.106	+			23088	KVVDSLYNK	9	72	533.3002862732756	1064.586019613351	2	533.30078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVVDSLYNK_	ENSG00000108671|ENST00000261712|PSMD11;ENST00000585265.1_1_17:30807457-30807646:+|nuORF;nc|ENSG00000108671|O00231-2|PSMD11	150.36159442982594	0.006784847064083231	4				NaN	NaN	0	NaN	5005	2829	7834
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7837	22.943	NaN	3354.4	30	0	515.64	0.106				-1	LLSAASPRR	9	66	506.7984708679836	1011.5823888027672	2	506.7984924316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LLSAASPRR_	ENST00000164640.8_1_X:153068091-153068391:-|nuORF	20.94693142431847	0.6074874384046576	4				NaN	NaN	0	NaN	5006	2829	7834
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7838	22.945	NaN	4499.3	30	0	742.11	0.106	+			28346	NEKEDIHSL	9	65	542.7670250816118	1083.5194972300235	2	542.7675170898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NEKEDIHSL_	ENSG00000133739|ENST00000360375|LRRCC1;ENST00000523669.5_1_8:86025320-86042154:+|nuORF;LRRCC1|p.E880Rfs*15|1|0.15|ENSG00000133739|chr8:85138174-85138175|-/A|frameshift_variant;LRRCC1|p.K502Nfs*2|1|0.38|ENSG00000133739|chr8:85129254-85129254|A/-|frameshift_variant;LRRCC1|p.M531Nfs*28|1|0.39|ENSG00000133739|chr8:85129338-85129339|-/A|frameshift_variant;LRRCC1|p.T1013Nfs*7|2|0.2|ENSG00000133739|chr8:85145442-85145443|-/A|frameshift_variant;LRRCC1|p.T599Yfs*2|1|0.16|ENSG00000133739|chr8:85131781-85131782|-/T|frameshift_variant;LRRCC1|p.T701Nfs*8|1|0.21|ENSG00000133739|chr8:85134973-85134974|-/A|frameshift_variant;nc|ENSG00000133739|Q9C099-2|LRRCC1	118.74307786436346	0.02196067127630568	4				NaN	NaN	0	NaN	5007	2829	7834
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7839	22.947	NaN	5622.2	30	0	1930.2	0.106				-1	SVLKDQLRQM	10	45	411.8934097991385	1232.6583999976156	3	411.89349365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_SVLKDQLRQM(Oxidation (M))_	ENSG00000173230|ENST00000614479|GOLGB1;GOLGB1|p.D2495Tfs*21|1|0.22|ENSG00000173230|chr3:121691867-121691867|T/-|frameshift_variant;GOLGB1|p.K2450Rfs*27|1|0.37|ENSG00000173230|chr3:121692000-121692000|T/-|frameshift_variant;nc|ENSG00000173230|Q14789-2|GOLGB1;nc|ENSG00000173230|Q14789-3|GOLGB1;nc|ENSG00000173230|Q14789-4|GOLGB1;nc|ENSG00000173230|Q14789|GOLGB1	33.921630207806714	0.6028135429846169	4				NaN	NaN	0	NaN	5008	2829	7834
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7840	22.949	NaN	4092.6	30	0	383.88	0.106			+	-1	KCAPKKAK	8	63	465.78122720577966	929.5479014783593	2	465.7812194824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_KC(Carbamidomethyl (C))APKKAK_	REV__ENSG00000143033|ENST00000370298|MTF2;REV__ENST00000467953.5_1_1:93575811-93580308:+|nuORF;REV__ENST00000471953.5_1_1:93545083-93592837:+|nuORF;REV__MTF2|p.G397Efs*6|2|0.34|ENSG00000143033|chr1:93133723-93133723|A/-|frameshift_variant;REV__nc|ENSG00000143033|Q9Y483-4|MTF2	40.5726180659479	0.6527593143185008	4				NaN	NaN	0	NaN	5009	2829	7834
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7841	22.95	NaN	1437.8	30	0	269.66	0.035	+			22892	KVLVPVTTK	9	45	492.82606699010057	983.6375810470012	2	492.82623291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KVLVPVTTK_	ENSG00000111785|ENST00000392837|RIC8B;nc|ENSG00000111785|Q9NVN3-1|RIC8B;nc|ENSG00000111785|Q9NVN3-3|RIC8B;nc|ENSG00000111785|Q9NVN3|RIC8B;RIC8B|p.T320Qfs*8|1|0.12|ENSG00000111785|chr12:106842707-106842707|A/-|frameshift_variant	61.691277971877994	0.19951612995419254	4				NaN	NaN	0	NaN	5010	2829	7834
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7859	22.988	NaN	78998	30	0	10552	0.215	+			16433	HESGASIKI	9	90	471.2557993315684	940.4970457299369	2	471.2556457519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HESGASIKI_	ENSG00000165119|ENST00000376263|HNRNPK;HNRNPK|p.R414C|1|0.56|ENSG00000165119|chr9:83970283-83970283|G/A|missense_variant;nc|ENSG00000165119|P61978-3|HNRNPK;nc|ENSG00000165119|P61978|HNRNPK	124.08010499294276	0.018729767491916592	4				NaN	NaN	0	NaN	5025	2832	7858
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7860	22.991	NaN	97192	30	0	22817	0.106	+			13831	GQSDIAITK	9	94	466.75571648006934	931.4968800269387	2	466.75579833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GQSDIAITK_	ENSG00000104738|ENST00000649973|MCM4	131.115847015877	0.014647977962315902	4				NaN	NaN	0	NaN	5026	2832	7858
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7861	22.994	NaN	12707	30	0	4890.5	0.106	+			4362	ATGSVFTGK	9	63	434.2321607983896	866.4497686635792	2	434.23187255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATGSVFTGK_	ENSG00000126790|ENST00000247194|L3HYPDH	126.24258497203832	0.01742065577488747	4				NaN	NaN	0	NaN	5027	2832	7858
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7862	22.995	NaN	2840.3	30	0	873.06	0.106				-1	 	0	42	376.20798800944596	375.20071154284597	1	376.2085266113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5028	2832	7858
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7863	22.997	NaN	2175.6	30	0	799.46	0.106			+	-1	MTVADYLKS	9	61	522.2594848965343	NaN	0	522.25927734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_M(Oxidation (M))TVADYLKS_	REV__ENST00000576058.2_1_16:13552215-13552527:+|nuORF	47.657333605630114	0.2228375344433429	4				NaN	NaN	0	NaN	5029	2832	7858
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7864	22.999	NaN	2397.6	30	0	518.67	0.037			+	46984	VKNNLKIGAK	10	44	362.2324880231741	1083.6756346697223	3	362.23260498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VKNNLKIGAK_	REV__ENSG00000137225|ENST00000398776|CAPN11	66.96192283764107	0.30252237217063654	4				NaN	NaN	0	NaN	5030	2832	7858
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7865	23	NaN	547.47	30	0	142	0.14	+			47178	VLTRSIAII	9	24	329.21826171875	NaN	0	329.21826171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VLTRSIAII_	ENSG00000110911|ENST00000262052|SLC11A2;nc|ENSG00000110911|P49281-3|SLC11A2;nc|ENSG00000110911|P49281-4|SLC11A2;nc|ENSG00000110911|P49281-5|SLC11A2;nc|ENSG00000110911|P49281|SLC11A2	12.959181472943097	0.3931207604263714	4				NaN	NaN	0	NaN	5031	2832	7858
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7883	23.038	NaN	13351	30	0	3463.9	0.214	+			45296	TVSADPVVK	9	75	458.260481583997	914.506410234794	2	458.260498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVSADPVVK_	ENSG00000136051|ENST00000332180|WASHC4	51.19269402634007	0.2889735674168909	4				NaN	NaN	0	NaN	5046	2835	7882
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7884	23.042	NaN	5225.7	30	0	1749.3	0.106	+			15929	HADPRIQGY	9	63	528.7645095520014	1055.5144661708027	2	528.764892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HADPRIQGY_	ENSG00000066322|ENST00000372458|ELOVL1;ENST00000464204.5_1_1:43830107-43833598:-|nuORF;ENST00000470968.6_1_1:43829589-43833598:-|nuORF;ENST00000479439.5_1_1:43830699-43831981:-|nuORF;ENST00000496932.1_1_1:43830832-43833598:-|nuORF;nc|ENSG00000066322|Q9BW60-2|ELOVL1	60.11826168202944	0.21262886028301267	4				NaN	NaN	0	NaN	5047	2835	7882
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7885	23.044	NaN	2780.5	30	0	843.21	0.106	+			22255	KTASDFITK	9	60	505.7793288675948	1009.5441048019896	2	505.77935791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KTASDFITK_	ENSG00000148180|ENST00000432226|GSN;ENST00000373807.5_1_9:124074589-124093809:+|nuORF;nc|ENSG00000148180|P06396-3|GSN;nc|ENSG00000148180|P06396-4|GSN;nc|ENSG00000148180|P06396|GSN	72.87924865735499	0.12833875048249987	4				NaN	NaN	0	NaN	5048	2835	7882
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7886	23.045	NaN	4221.9	30	0	745.95	0.106	+			21432	KNAISLPV	8	56	421.26009821239916	840.5056434915983	2	421.2606201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KNAISLPV_	ENSG00000149798|ENST00000279249|CDC42EP2	40.5726180659479	0.6527593143185008	4				NaN	NaN	0	NaN	5049	2835	7882
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7887	23.047	NaN	3686.4	30	0	1175.3	0.106				-1	MAGTVAPGGV	10	53	438.2180399236301	874.4215269140602	2	438.21795654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_M(Oxidation (M))AGTVAPGGV_	ENSG00000104973|ENST00000312865|MED25;ENST00000599722.1_1_19:50334108-50335279:+|nuORF;nc|ENSG00000104973|Q71SY5-4|MED25;nc|ENSG00000104973|Q71SY5-5|MED25;nc|ENSG00000104973|Q71SY5-6|MED25	47.91560031466742	0.4762067885998563	4				NaN	NaN	0	NaN	5050	2835	7882
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7888	23.049	NaN	1583.7	30	0	1076.4	0.106				-1	 	0	25	323.2014584923294	644.3883640514588	2	323.2014465332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5051	2835	7882
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7889	23.051	NaN	4301.3	30	0	1186.1	0.037			+	6311	AVTCSLTGTKP	11	44	378.86531458150307	1133.5741143447092	3	378.8656005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_AVTC(Carbamidomethyl (C))SLTGTKP_	REV__ENSG00000106991|ENST00000373203|ENG;REV__nc|ENSG00000106991|P17813-2|ENG	41.080066990542036	0.5431644350485484	4				NaN	NaN	0	NaN	5052	2835	7882
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7907	23.088	NaN	46331	30	0	12560	0.215	+			5675	AVDTAYVAK	9	85	469.2529112359365	936.491269538673	2	469.25286865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVDTAYVAK_	ENSG00000174851|ENST00000376901|YIF1A;ENST00000376899.8_1_11:66054976-66056456:-|nuORF;YIF1A|p.R131Gfs*50|3|0.43|ENSG00000174851|chr11:66287634-66287634|G/-|frameshift_variant	136.26810882979174	0.012230845423532208	4				NaN	NaN	0	NaN	5067	2838	7906
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7908	23.092	NaN	18832	30	0	6973.4	0.106	+			41033	SVIDDRLKEK	10	63	401.56272921816486	NaN	0	401.5627746582031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVIDDRLKEK_	ENSG00000159720|ENST00000290949|ATP6V0D1;ENST00000561658.5_1_16:67486328-67515058:-|nuORF	37.50817390946774	0.3770175549877019	4				NaN	NaN	0	NaN	5068	2838	7906
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7909	23.094	NaN	22005	30	0	14824	0.106			+	24549	LGLQQVLLQ	9	51	337.877914716975	1010.611914751125	3	337.8780822753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LGLQQVLLQ_	REV__ARHGEF12|p.G1290Afs*71|1|0.09|ENSG00000196914|chr11:120480061-120480062|-/CTGCAAGAATTAAATTA|frameshift_variant;REV__ENSG00000196914|ENST00000397843|ARHGEF12;REV__nc|ENSG00000196914|Q9NZN5-2|ARHGEF12	47.657333605630114	0.33044192980041115	4				NaN	NaN	0	NaN	5069	2838	7906
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7910	23.096	NaN	7127.5	30	0	2180.9	0.106				-1	SVQCMPVAK	9	60	510.2537052506367	1018.4928575680734	2	510.25433349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_SVQC(Carbamidomethyl (C))MPVAK_	ENSG00000160877|ENST00000292431|NACC1	70.8162118820467	0.13725933411854815	4				NaN	NaN	0	NaN	5070	2838	7906
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7911	23.097	NaN	4155.4	30	0	688.16	0.106	+			41046	SVIEEGDCK	9	60	490.22452475021123	978.4344965672225	2	490.2247009277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVIEEGDCK_	ENSG00000100994|ENST00000216962|PYGB;PYGB-C20orf152|1|fusion;PYGB-C20orf152|2|fusion;PYGB|p.T677Kfs*4|1|0.44|ENSG00000100994|chr20:25292466-25292466|C/-|frameshift_variant	42.86426827375447	0.38666266728046506	4				NaN	NaN	0	NaN	5071	2838	7906
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7912	23.099	NaN	3451.7	30	0	601	0.106	+			4466	ATIQGAYAR	9	56	475.7559938522187	949.4974347712374	2	475.7561950683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATIQGAYAR_	ENSG00000109736|ENST00000355443|MFSD10;ENST00000508276.1_1_4:2933242-2933551:-|nuORF;ENST00000514031.5_1_4:2932567-2933551:-|nuORF	69.6276240434122	0.14239879520340665	4				NaN	NaN	0	NaN	5072	2838	7906
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7913	23.101	NaN	5260.1	30	0	1102.5	0.039				-1	EGTCVGVSRWP	11	59	416.5312572213509	NaN	0	416.53118896484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_EGTC(Carbamidomethyl (C))VGVSRWP_	ENSG00000103657|ENST00000443617|HERC1;HERC1|p.C2300Hfs*14|1|0.44|ENSG00000103657|chr15:63678017-63678018|AA/-|frameshift_variant;HERC1|p.L3887Pfs*44|1|0.06|ENSG00000103657|chr15:63640394-63640395|-/ATGAATGG|frameshift_variant;HERC1|p.M2237*|1|0.39|ENSG00000103657|chr15:63678206-63678206|T/-|frameshift_variant	37.50817390946774	0.39825797133360086	4				NaN	NaN	0	NaN	5073	2838	7906
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7931	23.139	NaN	13638	30	0	1368.8	0.214	+			35931	SEGIKHVL	8	69	441.7556921113177	881.4968312894355	2	441.7554626464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEGIKHVL_	ENSG00000165475|ENST00000298248|CRYL1;nc|ENSG00000165475|Q9Y2S2-2|CRYL1	65.80317337860623	0.44433089765398776	4				NaN	NaN	0	NaN	5088	2841	7930
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7932	23.142	NaN	1719.6	30	0	416.62	0.106			+	26259	LSSVQTKS	8	45	425.23733826903214	NaN	0	425.23724365234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSSVQTKS_	REV__ENSG00000189132|ENST00000329357|FAM47B	40.77816245573522	1.7418937515398478	4				NaN	NaN	0	NaN	5089	2841	7930
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7933	23.144	NaN	2924.7	30	0	357.11	0.106	+			35680	SDHGAIQLK	9	50	484.761513456556	967.508473979912	2	484.7613220214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SDHGAIQLK_	ENST00000470510.5_1_1:245912867-246021878:-|nuORF	30.503639358989545	0.5181749237905803	4				NaN	NaN	0	NaN	5090	2841	7930
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7934	23.146	NaN	3984.1	30	0	486.55	0.106			+	47398	VPLMQLAQ	8	66	450.25638656351543	NaN	0	450.2179260253906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VPLMQLAQ_	REV__ENST00000416938.5_1_7:99704896-99705589:+|nuORF	33.51558372728122	1.7418937515398478	4				NaN	NaN	0	NaN	5091	2841	7930
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7935	23.148	NaN	2054.8	30	0	703.53	0.106	+			13548	GLSLSKTKGL	10	37	335.2095545185394	NaN	0	335.2095642089844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GLSLSKTKGL_	ENSG00000224389|ENST00000435363|C4B;ENSG00000244731|ENST00000428956|C4A;nc|ENSG00000244731|P0C0L4-2|C4A	17.364965105453717	0.4201028297492154	4				NaN	NaN	0	NaN	5092	2841	7930
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7936	23.15	NaN	9670.1	30	0	1976.9	0.046				-1	 	0	64	589.5937299048537	1765.7593603147611	3	589.59423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5093	2841	7930
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7937	23.15	NaN	744.02	30	0	133.76	0.141	+			41889	SVTSGKYKD	9	35	492.7530766509953	NaN	0	492.7534484863281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVTSGKYKD_	tr|U7SEE9|U7SEE9_FUSNU2',3'-cyclic-nucleotide3'-phosphodiesteraseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02343PE=4SV=1	32.81241826257853	0.3119040447479903	4				NaN	NaN	0	NaN	5094	2841	7930
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7955	23.189	NaN	12148	30	0	1659.5	0.215				-1	RSCVVIIQK	9	75	551.8238413424757	1101.6331297517513	2	551.82421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_RSC(Carbamidomethyl (C))VVIIQK_	ASPM|p.I1717Nfs*24|1|0.43|ENSG00000066279|chr1:197104101-197104102|-/T|frameshift_variant;ASPM|p.I3229Nfs*2|1|0.48|ENSG00000066279|chr1:197090339-197090340|-/T|frameshift_variant;ASPM|p.L1872Ffs*24|1|0.43|ENSG00000066279|chr1:197103635-197103636|-/A|frameshift_variant;ASPM|p.M2261*|1|0.44|ENSG00000066279|chr1:197102470-197102470|T/-|frameshift_variant;ASPM|p.N1680Kfs*11|1|0.33|ENSG00000066279|chr1:197104211-197104212|-/T|frameshift_variant;ASPM|p.Q2620Nfs*22|1|0.15|ENSG00000066279|chr1:197101393-197101394|-/TT|frameshift_variant;ASPM|p.Q2620Tfs*17|1|0.19|ENSG00000066279|chr1:197101393-197101394|-/T|frameshift_variant;ENSG00000066279|ENST00000367409|ASPM	82.7504851949679	0.08565546331141553	4				NaN	NaN	0	NaN	5109	2844	7954
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7956	23.192	NaN	16430	30	0	4548.3	0.106	+			4499	ATITERGITSR	11	61	402.22637919055103	1203.6573081718532	3	402.2264709472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATITERGITSR_	EMC1|p.F974Lfs*4|1|0.22|ENSG00000127463|chr1:19219363-19219363|A/-|frameshift_variant;ENSG00000127463|ENST00000477853|EMC1;nc|ENSG00000127463|Q8N766-2|EMC1;nc|ENSG00000127463|Q8N766-3|EMC1;nc|ENSG00000127463|Q8N766-4|EMC1	56.632244143249146	0.3535169766007185	4				NaN	NaN	0	NaN	5110	2844	7954
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7957	23.194	NaN	3513	30	0	826.65	0.106	+			23094	KVVDVIGTK	9	58	479.7997247869872	957.5848966407744	2	479.7996826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KVVDVIGTK_	ENSG00000005249|ENST00000265717|PRKAR2B	72.87924865735499	0.12833875048249987	4				NaN	NaN	0	NaN	5111	2844	7954
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7958	23.196	NaN	4442.9	30	0	1941.4	0.106			+	3563	ASTQMSSSLKK	11	36	389.87157284037033	NaN	0	389.87158203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASTQMSSSLKK_	REV__ENSG00000103404|ENST00000219689|USP31	25.57405402267927	0.45144328854727944	4				NaN	NaN	0	NaN	5112	2844	7954
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7959	23.198	NaN	6031.2	30	0	2497.7	0.106			+	-1	LSCTGLAWRR	10	58	407.21675818778556	1218.6284451635568	3	407.21685791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_LSC(Carbamidomethyl (C))TGLAWRR_	REV__ENST00000563135.5_1_15:41146443-41149170:+|nuORF	33.921630207806714	0.6028135429846169	4				NaN	NaN	0	NaN	5113	2844	7954
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7960	23.2	NaN	4317.8	30	0	724.63	0.035	+			19736	KDVEQRLI	8	63	500.79243165128025	999.5703103693605	2	500.7929992675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KDVEQRLI_	tr|U7SGD6|U7SGD6_FUSNULysMdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02265PE=4SV=1	58.78195531508484	0.5138399468736706	4				NaN	NaN	0	NaN	5114	2844	7954
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7961	23.2	NaN	1430.4	30	0	155.79	0.14	+			26996	LYPGRKAPQ	9	57	515.2966894917572	NaN	0	515.2969360351562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LYPGRKAPQ_	ENST00000537345.5_1_1:116947038-116947215:+|nuORF	45.9519527083369	0.2345902329052062	4				NaN	NaN	0	NaN	5115	2844	7954
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7980	23.24	NaN	4619.9	30	0	2062.1	0.214			+	23413	LAARREGH	8	55	455.25574125417256	908.4969295751451	2	455.25537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LAARREGH_	REV__ENST00000264198.4_1_1:20829797-20834584:-|nuORF	51.33545320467046	0.5859736979383976	4				NaN	NaN	0	NaN	5131	2847	7979
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7981	23.243	NaN	6086.6	30	0	884.38	0.106			+	8139	EAAARVKV	8	56	422.25574378384306	842.4969346344861	2	422.2556457519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EAAARVKV_	REV__ENST00000469819.5_1_22:38453534-38461185:+|nuORF	79.45101966838831	0.3281480470254892	4				NaN	NaN	0	NaN	5132	2847	7979
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7982	23.245	NaN	1911.3	30	0	177.85	0.106	+			16407	HEQVVERL	8	53	505.2747032669091	1008.5348536006182	2	505.2750549316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HEQVVERL_	ENSG00000161888|ENST00000592540|SPC24;nc|ENSG00000161888|Q8NBT2-2|SPC24	88.17693792209575	0.28298906586229006	4				NaN	NaN	0	NaN	5133	2847	7979
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7983	23.247	NaN	13931	30	0	4594	0.106	+			4505	ATITKVLQK	9	55	334.5497554023207	1000.6274368071622	3	334.5500183105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATITKVLQK_	ENSG00000130589|ENST00000467148|HELZ2;HELZ2|p.D1312G|1|0.12|ENSG00000130589|chr20:63564887-63564887|T/C|missense_variant;HELZ2|p.G2213Vfs*22|1|0.14|ENSG00000130589|chr20:63561876-63561876|C/-|frameshift_variant;HELZ2|p.R2206Vfs*29|2|0.28|ENSG00000130589|chr20:63561898-63561898|G/-|frameshift_variant;nc|ENSG00000130589|Q9BYK8-2|HELZ2;nc|ENSG00000130589|Q9BYK8|HELZ2	31.529811441608018	0.5085848003137583	4				NaN	NaN	0	NaN	5134	2847	7979
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7984	23.249	NaN	6727.4	30	0	1739.5	0.106	+			38636	SSHMVTFEK	9	65	533.2555401500415	1064.496527366883	2	533.2560424804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSHMVTFEK_	ENST00000517402.1_1_7:27222251-27222365:-|nuORF	96.0336014099291	0.047854655524928534	4				NaN	NaN	0	NaN	5135	2847	7979
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7985	23.251	NaN	1392	30	0	354.16	0.034			+	44450	TSMVVSTAK	9	48	462.245673376466	922.476793819732	2	462.2464294433594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TSMVVSTAK_	REV__ENSG00000158553|ENST00000444565|POM121L2;REV__POM121L2|p.D642Gfs*77|1|0.06|ENSG00000158553|chr6:27310248-27310249|-/TACAATTCCT|frameshift_variant	31.529811441608018	0.5085848003137583	4				NaN	NaN	0	NaN	5136	2847	7979
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7986	23.251	NaN	1045	30	0	113.42	0.142	+			34625	RVQDYIQSK	9	48	568.806640625	NaN	0	568.806640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RVQDYIQSK_	ENSG00000123836|ENST00000367080|PFKFB2;ENST00000411990.6_1_1:207235951-207252361:+|nuORF;nc|ENSG00000123836|O60825-2|PFKFB2	54.722347961057174	0.17414871455573902	4				NaN	NaN	0	NaN	5137	2847	7979
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8004	23.289	NaN	12107	30	0	2660.4	0.215	+			40266	STSPSVALSK	10	65	488.7689749263358	975.5233969194716	2	488.7690124511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STSPSVALSK_	BCOR|p.K1061Sfs*52|1|0.28|ENSG00000183337|chrX:40071029-40071029|T/-|frameshift_variant;BCOR|p.K839Qfs*5|1|0.26|ENSG00000183337|chrX:40072831-40072832|-/G|frameshift_variant;BCOR|p.K839Sfs*17|1|0.41|ENSG00000183337|chrX:40072832-40072832|G/-|frameshift_variant;BCOR|p.L1646Sfs*28|1|0.06|ENSG00000183337|chrX:40053926-40053926|G/-|frameshift_variant;BCOR|p.L487Hfs*13|1|0.67|ENSG00000183337|chrX:40073886-40073887|-/GTGT|frameshift_variant;BCOR|p.N529Tfs*60|1|0.51|ENSG00000183337|chrX:40073760-40073760|T/-|frameshift_variant;BCOR|p.P1621Qfs*53|2|0.52|ENSG00000183337|chrX:40054000-40054000|G/-|frameshift_variant;BCOR|p.R1215Kfs*30|1|0.14|ENSG00000183337|chrX:40063811-40063812|-/T|frameshift_variant;ENSG00000183337|ENST00000378444|BCOR;ENST00000490976.5_1_X:39931586-39937182:-|nuORF;nc|ENSG00000183337|Q6W2J9-2|BCOR;nc|ENSG00000183337|Q6W2J9-3|BCOR;nc|ENSG00000183337|Q6W2J9-4|BCOR	112.10723106719422	0.0417416748461292	4				NaN	NaN	0	NaN	5152	2850	8003
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8005	23.293	NaN	4943.7	30	0	693.53	0.106	+			42856	TEFVHGGG	8	59	402.18764203360934	802.3607311340187	2	402.18768310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEFVHGGG_	ENST00000469172.5_1_10:70091245-70091596:+|nuORF	28.2542754592877	0.7411748056684583	4				NaN	NaN	0	NaN	5153	2850	8003
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8006	23.295	NaN	3392.1	30	0	494.25	0.106	+			15974	HAIMRSPQM	9	62	535.7646218035035	1069.5146906738069	2	535.765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HAIMRSPQM_	CTNNB1|p.L301Hfs*16|1|0.05|ENSG00000168036|chr3:41225827-41225831|TTCAA/-|frameshift_variant;CTNNB1|p.M271Wfs*5|1|0.08|ENSG00000168036|chr3:41225733-41225733|A/-|frameshift_variant;ENSG00000168036|ENST00000349496|CTNNB1	93.1432384553994	0.056003526918089595	4				NaN	NaN	0	NaN	5154	2850	8003
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8007	23.296	NaN	2621.5	30	0	365.41	0.106			+	33679	RNRGKTPG	8	51	443.25592519071904	NaN	0	443.25537109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RNRGKTPG_	REV__ENST00000476764.2_1_3:197281466-197282409:-|nuORF	40.5726180659479	1.7418937515398478	4				NaN	NaN	0	NaN	5155	2850	8003
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8008	23.298	NaN	1733.1	30	0	263.65	0.106	+			49231	VVNKTIFAK	9	61	510.31612816798884	NaN	0	510.3158264160156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVNKTIFAK_	ENSG00000197170|ENST00000356126|PSMD12;ENST00000490962.1_1_3:72925982-72926321:-|nuORF;nc|ENSG00000197170|O00232-2|PSMD12	88.17693792209575	0.04527150213038833	4				NaN	NaN	0	NaN	5156	2850	8003
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8009	23.3	NaN	1943	30	0	371.51	0.106	+			31218	QGSSVFPI	8	51	417.72134621776036	833.4281395023207	2	417.7215576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QGSSVFPI_	ENST00000578730.1_1_4:1244819-1245182:+|nuORF	45.9519527083369	0.6193794311207887	4				NaN	NaN	0	NaN	5157	2850	8003
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8010	23.302	NaN	2052.8	30	0	485.37	0.037	+			36838	SIFEPAKGGEK	11	51	581.8083502106577	1161.6021474881154	2	581.8110961914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SIFEPAKGGEK_	ENSG00000160710|ENST00000368474|ADAR;nc|ENSG00000160710|P55265-2|ADAR;nc|ENSG00000160710|P55265-3|ADAR;nc|ENSG00000160710|P55265-4|ADAR;nc|ENSG00000160710|P55265-5|ADAR	80.73710961997651	0.14622783403345802	4				NaN	NaN	0	NaN	5158	2850	8003
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8028	23.338	NaN	21542	30	0	3007.4	0.214	+			8508	EATKAVTEM	9	71	490.2415035385384	978.4684541438768	2	490.2416076660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EATKAVTEM_	ENSG00000070756|ENST00000318607|PABPC1;ENSG00000090621|ENST00000372858|PABPC4;ENSG00000101104|ENST00000217073|PABPC1L;ENSG00000151846|ENST00000281589|PABPC3;ENST00000476056.5_1_20:43550276-43561823:+|nuORF;ENST00000490798.5_1_20:43550276-43564067:+|nuORF;nc|ENSG00000070756|P11940-2|PABPC1;nc|ENSG00000090621|Q13310-2|PABPC4;nc|ENSG00000090621|Q13310|PABPC4;nc|ENSG00000101104|Q4VXU2|PABPC1L	143.8867514904718	0.008656634767784652	4				NaN	NaN	0	NaN	5173	2853	8027
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8029	23.342	NaN	58470	30	0	16353	0.106				-1	 	0	82	363.54122024554863	1087.6018313368459	3	363.5413818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5174	2853	8027
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8030	23.344	NaN	10509	30	0	4146.3	0.106	+			27494	MMHEEHLRQ	9	67	605.7768747811016	1209.539196629003	2	605.778076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MMHEEHLRQ_	ENSG00000159625|ENST00000360716|DRC7;nc|ENSG00000159625|Q8IY82-2|DRC7	44.116797842482775	0.37197099687881774	4				NaN	NaN	0	NaN	5175	2853	8027
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8031	23.346	NaN	30768	30	0	6629.2	0.106	+			16155	HEAERNIAL	9	78	526.7774489874467	1051.5403450416934	2	526.7781982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HEAERNIAL_	ENSG00000015568|ENST00000016946|RGPD5;ENSG00000153165|ENST00000409886|RGPD3;ENSG00000153201|ENST00000283195|RANBP2;ENSG00000169629|ENST00000302558|RGPD8;ENSG00000183054|ENST00000329516|RGPD6;ENSG00000185304|ENST00000398146|RGPD2;ENSG00000187627|ENST00000641458|RGPD1;ENSG00000196862|ENST00000408999|RGPD4;nc|ENSG00000183054|Q99666-2|RGPD5;nc|ENSG00000187627|P0DJD0|RGPD1;nc|ENSG00000196862|Q7Z3J3-2|RGPD4;RANBP2|p.A864Lfs*3|1|0.3|ENSG00000153201|chr2:108758533-108758533|G/-|frameshift_variant;RANBP2|p.C2737Vfs*35|1|0.18|ENSG00000153201|chr2:108772957-108772957|T/-|frameshift_variant;RANBP2|p.F3068Lfs*10|1|0.06|ENSG00000153201|chr2:108782692-108782692|T/-|frameshift_variant;RANBP2|p.H3114Sfs*18|1|0.33|ENSG00000153201|chr2:108782827-108782828|-/T|frameshift_variant;RANBP2|p.K1989Nfs*9|1|0.05|ENSG00000153201|chr2:108766505-108766506|-/TATCCTG|frameshift_variant;RANBP2|p.K2576Nfs*63|2|0.22|ENSG00000153201|chr2:108768262-108768262|A/-|frameshift_variant;RANBP2|p.S1486Rfs*51|1|0.05|ENSG00000153201|chr2:108764996-108764997|-/ATTTTGTATTC|frameshift_variant;RGPD2|p.F1350Lfs*25|1|0.25|ENSG00000185304|chr2:87782974-87782974|A/-|frameshift_variant;RGPD3|p.V1441*|1|0.45|ENSG00000153165|chr2:106423647-106423647|T/-|frameshift_variant;RGPD4|p.K568Nfs*33|1|0.14|ENSG00000196862|chr2:107859787-107859787|A/-|frameshift_variant	120.8684288430529	0.02067403653475984	4				NaN	NaN	0	NaN	5176	2853	8027
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8032	23.347	NaN	8052.6	30	0	3050.5	0.106			+	30272	PTFKVKVSKK	10	61	387.9164695638593	1160.727579291778	3	387.91644287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PTFKVKVSKK_	REV__ENSG00000075568|ENST00000186436|TMEM131;REV__TMEM131|p.E934K|1|0.09|ENSG00000075568|chr2:97797435-97797435|C/T|missense_variant;REV__TMEM131|p.L1469Tfs*5|1|0.43|ENSG00000075568|chr2:97772340-97772341|-/T|frameshift_variant	50.033510581677724	0.4566913063131936	4				NaN	NaN	0	NaN	5177	2853	8027
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8033	23.349	NaN	2429.8	30	0	298.39	0.106			+	2731	AQYGQGLLTK	10	61	539.7994153420275	1077.5842777508549	2	539.8001708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AQYGQGLLTK_	REV__ENSG00000167895|ENST00000318430|TMC8;REV__nc|ENSG00000167895|Q8IU68-2|TMC8;REV__TMC8|p.L494Pfs*7|1|0.38|ENSG00000167895|chr17:78138130-78138131|-/C|frameshift_variant	65.46538089061403	0.31613324008013116	4				NaN	NaN	0	NaN	5178	2853	8027
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8034	23.351	NaN	2537.7	30	0	953.04	0.033			+	-1	PMEKGGNP	8	47	423.1945233084379	NaN	0	423.19451904296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_PM(Oxidation (M))EKGGNP_	REV__nc|ENSG00000266200|P54317|PNLIPRP2	40.5726180659479	1.7418937515398478	4				NaN	NaN	0	NaN	5179	2853	8027
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8052	23.388	NaN	39121	30	0	24916	0.215	+			29919	PLSAWSPGKK	10	72	357.5377772805369	1069.5915024418107	3	357.5378723144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PLSAWSPGKK_	ENSG00000106648|ENST00000392800|GALNTL5;GALNTL5|p.G206Afs*25|1|0.42|ENSG00000106648|chr7:151987238-151987239|GG/-|frameshift_variant;GALNTL5|p.W332Lfs*32|1|0.15|ENSG00000106648|chr7:152007907-152007908|-/T|frameshift_variant;nc|ENSG00000106648|Q7Z4T8-2|GALNTL5	35.15202426646627	0.5927656479315102	4				NaN	NaN	0	NaN	5194	2856	8051
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8053	23.392	NaN	7889.5	30	0	1743.6	0.106	+			19745	KDVKVQVM	8	67	473.77288432470954	945.5312157162191	2	473.7729187011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KDVKVQVM_	ENSG00000131236|ENST00000372805|CAP1;ENST00000461993.1_1_1:40535258-40537202:+|nuORF;nc|ENSG00000131236|Q01518-2|CAP1	101.60071028292904	0.24979566554663588	4				NaN	NaN	0	NaN	5195	2856	8051
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8054	23.394	NaN	9629.1	30	0	2708.7	0.106	+			39422	STDSDSFVK	9	78	493.2270729792123	984.4395930252247	2	493.22698974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STDSDSFVK_	ENSG00000106608|ENST00000453200|URGCP;nc|ENSG00000106608|Q8TCY9-2|URGCP;nc|ENSG00000106608|Q8TCY9-3|URGCP;nc|ENSG00000106608|Q8TCY9-4|URGCP;URGCP|p.P521Lfs*8|1|0.22|ENSG00000106608|chr7:43877901-43877901|G/-|frameshift_variant	101.25262130126117	0.03792372629710479	4				NaN	NaN	0	NaN	5196	2856	8051
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8055	23.396	NaN	12871	30	0	4445.8	0.106	+			49363	VVSSTVVTAA	10	68	467.26594567119855	932.5173384091971	2	467.26580810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVSSTVVTAA_	ENST00000372504.5_2_1:43314964-43315012:+|nuORF	143.10689835833298	0.009925723221299386	4				NaN	NaN	0	NaN	5197	2856	8051
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8056	23.398	NaN	2755.8	30	0	357.42	0.106	+			51472	YVHDDGRVSY	10	43	404.1874960596156	1209.540658779047	3	404.1875305175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YVHDDGRVSY_	ENSG00000130755|ENST00000597595|GMFG;ENST00000601731.1_1_19:39819119-39826633:-|nuORF	39.252832667884924	0.5560298534376815	4				NaN	NaN	0	NaN	5198	2856	8051
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8057	23.4	NaN	3662.4	30	0	628.19	0.033			+	28560	NKDTSVPI	8	66	437.23698642614613	872.4594199190923	2	437.2371826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NKDTSVPI_	REV__ENST00000479887.1_1_7:143949295-143949613:-|nuORF	42.86426827375447	0.638539151166014	4				NaN	NaN	0	NaN	5199	2856	8051
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8058	23.4	NaN	4339.3	30	0	714.65	0.138			+	12084	GAALLWKQ	8	58	443.7597656040098	885.5049782748196	2	443.7602844238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GAALLWKQ_	REV__ENSG00000166340|ENST00000299427|TPP1;REV__ENST00000428886.6_1_11:6638445-6640631:-|nuORF;REV__TPP1|p.I484Sfs*4|1|0.24|ENSG00000166340|chr11:6614968-6614968|C/-|frameshift_variant	50.0245360154114	0.5941082100236891	4				NaN	NaN	0	NaN	5200	2856	8051
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8076	23.438	NaN	79667	30	0	22069	0.214	+			4489	ATITDKELLKK	11	101	420.59038183624835	1258.749316108945	3	420.5903015136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATITDKELLKK_	ENSG00000131503|ENST00000360839|ANKHD1;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	92.94320115499777	0.08672601920733168	4				NaN	NaN	0	NaN	5215	2859	8075
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8077	23.442	NaN	15894	30	0	8952.9	0.106	+			334	AAPTVRAPA	9	47	427.2480752869688	852.4815976407376	2	427.2479248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAPTVRAPA_	ENST00000428449.5_1_7:121945734-121946145:+|nuORF	37.15910966729921	0.4535818937225704	4				NaN	NaN	0	NaN	5216	2859	8075
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8078	23.444	NaN	4592.1	30	0	346.16	0.106	+			32665	RAASLLAQL	9	66	471.7899305500075	941.565308166815	2	471.78997802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RAASLLAQL_	ENST00000539361.1_1_11:61551728-61551962:+|nuORF	82.24051045832904	0.08786059719216216	4				NaN	NaN	0	NaN	5217	2859	8075
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8079	23.446	NaN	5569	30	0	1690.7	0.106			+	37294	SLATQLGGPA	10	63	457.75044055438065	913.4863281755613	2	457.7503356933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLATQLGGPA_	REV__ENST00000561547.5_1_16:28890323-28891133:-|nuORF	51.33545320467046	0.4446945571623749	4				NaN	NaN	0	NaN	5218	2859	8075
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8080	23.448	NaN	3236.5	30	0	366.06	0.106	+			13664	GNLEGFVSGA	10	57	475.7339720097213	NaN	0	475.7337646484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GNLEGFVSGA_	tr|U7SJJ7|U7SJJ7_FUSNUThioredoxindomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02188PE=4SV=1	45.97224482568171	0.33106653400957564	4				NaN	NaN	0	NaN	5219	2859	8075
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8081	23.449	NaN	17724	30	0	6098.9	0.038			+	26073	LSLSLTRTLAE	11	66	401.9028609415539	1202.6867534248618	3	401.90277099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSLSLTRTLAE_	REV__ENST00000368680.3_1_1:153651158-153651548:+|nuORF	34.08650109265054	0.6322515996262609	4				NaN	NaN	0	NaN	5220	2859	8075
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8082	23.45	NaN	3272.8	30	0	452.08	0.141	+			16134	HEADKTYML	9	60	562.2576864508526	1122.500819968505	2	562.258056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_HEADKTYM(Oxidation (M))L_	ENSG00000143155|ENST00000367833|TIPRL	98.62937762414208	0.04060045538121712	4				NaN	NaN	0	NaN	5221	2859	8075
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8100	23.489	NaN	104630	30	0	55161	0.214	+			17396	IAPTGHSL	8	58	398.2213877813665	794.428222629533	2	398.22137451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IAPTGHSL_	ENSG00000125354|ENST00000394610|SEPTIN6;ENSG00000138758|ENST00000264893|SEPTIN11;nc|ENSG00000125354|Q14141-3|SEPTIN6;nc|ENSG00000125354|Q14141-4|SEPTIN6;nc|ENSG00000125354|Q14141|SEPTIN6;nc|ENSG00000138758|Q9NVA2-2|SEPTIN11	88.64286706044652	0.2815785716369046	4				NaN	NaN	0	NaN	5236	2862	8099
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8101	23.493	NaN	6740.7	30	0	2020.1	0.106	+			17240	HVSTVNPNY	9	65	515.7508688176349	1029.4871847020697	2	515.7515869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HVSTVNPNY_	ENSG00000182742|ENST00000332503|HOXB4;ENSG00000198353|ENST00000430889|HOXC4	71.87747018426188	0.13267044672804276	4				NaN	NaN	0	NaN	5237	2862	8099
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8102	23.495	NaN	4303.3	30	0	707.92	0.106	+			18463	ISEQAAVL	8	61	415.73447586409947	829.454398794999	2	415.7344055175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ISEQAAVL_	ENSG00000179094|ENST00000317276|PER1;ENST00000579065.1_1_17:8052750-8054072:-|nuORF;nc|ENSG00000179094|O15534-4|PER1;PER1|p.A962Pfs*160|1|0.38|ENSG00000179094|chr17:8143454-8143454|C/-|frameshift_variant;PER1|p.L380Cfs*73|1|0.18|ENSG00000179094|chr17:8148093-8148093|G/-|frameshift_variant;PER1|p.L466*|1|0.14|ENSG00000179094|chr17:8147571-8147571|G/-|frameshift_variant	45.97224482568171	0.6192535143389125	4				NaN	NaN	0	NaN	5238	2862	8099
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8103	23.497	NaN	2204.6	30	0	385.61	0.106				-1	 	0	56	595.5970287424664	1783.7692568275988	3	595.5982055664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5239	2862	8099
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8104	23.499	NaN	2501.9	30	0	330.62	0.106	+			21182	KLAISSLMQ	9	63	495.7861620930555	989.557771252911	2	495.7856750488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KLAISSLMQ_	ENST00000440114.1_1_2:198359415-198360034:-|nuORF	41.42661286455405	0.403525789677298	4				NaN	NaN	0	NaN	5240	2862	8099
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8105	23.5	NaN	3667.9	30	0	377.21	0.034			+	-1	MQQPAKSL	8	58	459.74015603555546	917.4657591379109	2	459.7385559082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_M(Oxidation (M))QQPAKSL_	REV__ENSG00000205307|ENST00000622764|SAP25;REV__nc|ENSG00000205307|Q8TEE9|SAP25	71.29570347882199	0.39610197767395533	4				NaN	NaN	0	NaN	5241	2862	8099
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8106	23.501	NaN	1289	30	0	313.68	0.14			+	25740	LRVSELAGSL	10	56	522.8057861328125	NaN	0	522.8057861328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LRVSELAGSL_	REV__ENSG00000158578|ENST00000650242|ALAS2;REV__ENST00000498636.1_1_X:55035677-55046849:-|nuORF;REV__nc|ENSG00000158578|P22557-2|ALAS2;REV__nc|ENSG00000158578|P22557-3|ALAS2;REV__nc|ENSG00000158578|P22557-4|ALAS2	29.170058357718403	0.40439580130713204	4				NaN	NaN	0	NaN	5242	2862	8099
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8124	23.539	NaN	22473	30	0	3225.6	0.214	+			34500	RVFTGVVTK	9	84	503.80562220374867	1005.5966914742974	2	503.8056945800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVFTGVVTK_	CCAR1|p.E816Kfs*75|1|0.25|ENSG00000060339|chr10:68771347-68771347|A/-|frameshift_variant;CCAR1|p.Q181Kfs*2|1|0.31|ENSG00000060339|chr10:68747178-68747178|C/-|frameshift_variant;CCAR1|p.S739Vfs*11|1|0.47|ENSG00000060339|chr10:68765992-68765992|A/-|frameshift_variant;ENSG00000060339|ENST00000265872|CCAR1;nc|ENSG00000060339|Q8IX12-2|CCAR1	96.66504779109242	0.04607440320619715	4				NaN	NaN	0	NaN	5257	2865	8123
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8125	23.543	NaN	7518.1	30	0	1333.8	0.106			+	7863	DREFGKVV	8	69	475.25847842031686	948.5024039074337	2	475.2584228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DREFGKVV_	REV__ST6GALNAC2|p.I183V|1|0.05|ENSG00000070731|chr17:76572759-76572759|T/C|missense_variant	49.536043120802724	0.597139409391072	4				NaN	NaN	0	NaN	5258	2865	8123
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8126	23.545	NaN	5741.9	30	0	939.05	0.106	+			12970	GETKAKVLL	9	66	479.800046101514	957.585539269828	2	479.7999267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GETKAKVLL_	ENSG00000100714|ENST00000652337|MTHFD1;ENST00000413059.1_1_X:57419910-57420861:-|nuORF;ENST00000555252.5_1_14:64855058-64907131:+|nuORF;MTHFD1|p.N682*|1|0.41|ENSG00000100714|chr14:64442303-64442304|-/T|frameshift_variant	95.81516180277367	0.04847050768394289	4				NaN	NaN	0	NaN	5259	2865	8123
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8127	23.546	NaN	2479.2	30	0	483.93	0.106	+			25096	LLPAGAVQG	9	48	413.2450012322909	824.4754495313819	2	413.2449645996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LLPAGAVQG_	ENSG00000123131|ENST00000379341|PRDX4;ENST00000495599.1_1_X:23685681-23689545:+|nuORF	31.954861631926434	0.5046124803899898	4				NaN	NaN	0	NaN	5260	2865	8123
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8128	23.548	NaN	1525.3	30	0	542.77	0.106	+			34272	RTKATVELK	9	49	523.3215328458692	1044.6285127585384	2	523.321533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RTKATVELK_	ENSG00000080503|ENST00000349721|SMARCA2;nc|ENSG00000080503|P51531-2|SMARCA2	54.776311868738084	0.25715957988447635	4				NaN	NaN	0	NaN	5261	2865	8123
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8129	23.55	NaN	6634.2	30	0	2478.8	0.106	+			29368	PAGGVGGP	8	51	306.16093805394826	NaN	0	306.160888671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PAGGVGGP_	ENSG00000108604|ENST00000448276|SMARCD2;SMARCD2|p.P489Lfs*19|1|0.36|ENSG00000108604|chr17:63833145-63833145|G/-|frameshift_variant;SMARCD2|p.P92Lfs*20|1|0.33|ENSG00000108604|chr17:63837567-63837567|G/-|frameshift_variant;SMARCD2|p.P96Hfs*16|1|0.36|ENSG00000108604|chr17:63837555-63837555|G/-|frameshift_variant	33.49298260027079	1.7418937515398478	4				NaN	NaN	0	NaN	5262	2865	8123
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8130	23.552	NaN	7119.9	30	0	666.15	0.033	+			43208	TEVKAVKL	8	67	444.28154153419297	886.548530135186	2	444.28131103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TEVKAVKL_	ENSG00000141580|ENST00000392325|WDR45B;ENST00000574828.1_1_17:80584850-80606216:-|nuORF;ENST00000583470.1_1_17:30439049-30439436:-|nuORF	96.19043198914106	0.25873003980794995	4				NaN	NaN	0	NaN	5263	2865	8123
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8148	23.588	NaN	5888.6	30	0	1315.7	0.215	+			3675	ASYTKIVVK	9	51	336.87424557180987	1007.6009073156297	3	336.8743591308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASYTKIVVK_	ENSG00000141252|ENST00000437048|VPS53;ENST00000541903.6_1_17:422370-426182:-|nuORF	68.84614121027924	0.14577793175421136	4				NaN	NaN	0	NaN	5278	2868	8147
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8149	23.592	NaN	5804.2	30	0	386.73	0.106	+			38119	SPVTETRTY	9	72	527.264151376413	1052.513749819626	2	527.2644653320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SPVTETRTY_	ENSG00000102445|ENST00000429979|RUBCNL;ENST00000441284.5_2_13:46917522-46942212:-|nuORF;nc|ENSG00000102445|Q9H714-1|RUBCNL;nc|ENSG00000102445|Q9H714-3|RUBCNL;nc|ENSG00000102445|Q9H714-4|RUBCNL;nc|ENSG00000102445|Q9H714-6|RUBCNL	126.24258497203832	0.01742065577488747	4				NaN	NaN	0	NaN	5279	2868	8147
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8150	23.594	NaN	7673.8	30	0	3651	0.106	+			8362	EALKSHIM	8	58	464.74931598288345	927.4840790325669	2	464.74945068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EALKSHIM_	ENSG00000150753|ENST00000280326|CCT5;ENST00000508451.1_1_5:10250422-10254994:+|nuORF;ENST00000510326.5_1_5:10250452-10254343:+|nuORF	82.30502934623384	0.30436709589983096	4				NaN	NaN	0	NaN	5280	2868	8147
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8151	23.595	NaN	4073.4	30	0	925.1	0.106	+			39286	STASAVPLAK	10	63	472.77377224316257	943.5329915531252	2	472.7737121582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STASAVPLAK_	ENSG00000134240|ENST00000369406|HMGCS2;HMGCS2|p.I277Sfs*22|1|0.26|ENSG00000134240|chr1:119759139-119759139|T/-|frameshift_variant;nc|ENSG00000134240|P54868-2|HMGCS2;nc|ENSG00000134240|P54868-3|HMGCS2	90.60085204095205	0.12763388345653318	4				NaN	NaN	0	NaN	5281	2868	8147
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8152	23.597	NaN	3918.5	30	0	677.67	0.106			+	7553	DHNELEEF	8	69	516.7167143733459	1031.4188758134917	2	516.71728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DHNELEEF_	REV__ENSG00000104237|ENST00000220676|RP1;REV__RP1|p.H1831Mfs*17|1|0.32|ENSG00000104237|chr8:54629369-54629369|T/-|frameshift_variant;REV__RP1|p.K1581Nfs*7|1|0.44|ENSG00000104237|chr8:54628619-54628619|A/-|frameshift_variant;REV__RP1|p.L1493Vfs*4|1|0.09|ENSG00000104237|chr8:54628358-54628359|-/GTCCGTGG|frameshift_variant;REV__RP1|p.P1648Lfs*62|1|0.32|ENSG00000104237|chr8:54628817-54628817|T/-|frameshift_variant	33.51558372728122	0.7005509609380386	4				NaN	NaN	0	NaN	5282	2868	8147
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8153	23.599	NaN	2338.1	30	0	889.28	0.037			+	33737	RPNQKYVDF	9	51	583.8025734842411	1165.590594035282	2	583.8031616210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RPNQKYVDF_	REV__nc|ENSG00000136305|Q9UHD4|CIDEB	27.047317107675042	0.5504760921104335	4				NaN	NaN	0	NaN	5283	2868	8147
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8154	23.6	NaN	5765	30	0	623.19	0.14	+			16120	HDVNLGRAV	9	72	490.7671779059525	979.519802878705	2	490.7668762207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HDVNLGRAV_	ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1670Tfs*23|1|0.29|ENSG00000174231|chr17:1659487-1659487|C/-|frameshift_variant	104.74654710444128	0.034358562718640136	4				NaN	NaN	0	NaN	5284	2868	8147
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8172	23.639	NaN	14039	30	0	2238.4	0.214	+			15975	HAIMRSPQM	9	74	535.7646218035035	1069.5146906738069	2	535.7655029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HAIMRSPQM_	CTNNB1|p.L301Hfs*16|1|0.05|ENSG00000168036|chr3:41225827-41225831|TTCAA/-|frameshift_variant;CTNNB1|p.M271Wfs*5|1|0.08|ENSG00000168036|chr3:41225733-41225733|A/-|frameshift_variant;ENSG00000168036|ENST00000349496|CTNNB1	101.25262130126117	0.03792372629710479	4				NaN	NaN	0	NaN	5299	2871	8171
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8173	23.643	NaN	13172	30	0	8759.2	0.106	+			32471	QVMKTVLGK	9	70	502.3018252213626	1002.5890975095252	2	502.3019104003906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QVMKTVLGK_	ENST00000562439.5_1_16:57238447-57238567:+|nuORF	65.46538089061403	0.16805504838372562	4				NaN	NaN	0	NaN	5300	2871	8171
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8174	23.645	NaN	4941	30	0	585.46	0.106	+			42785	TEAHGLARL	9	65	484.2694546098854	966.5243562865708	2	484.26934814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TEAHGLARL_	ENSG00000123989|ENST00000243776|CHPF;nc|ENSG00000123989|Q8IZ52-4|CHPF	76.7741389293348	0.11149722112137898	4				NaN	NaN	0	NaN	5301	2871	8171
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8175	23.646	NaN	3771.1	30	0	273.76	0.106	+			24999	LLESLPLGQRQ	11	54	418.5785306976307	1252.7137626930921	3	418.57843017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LLESLPLGQRQ_	ENSG00000041515|ENST00000457511|MYO16;MYO16|p.A1585Rfs*18|2|0.37|ENSG00000041515|chr13:109141025-109141025|C/-|frameshift_variant;MYO16|p.F842Sfs*17|6|0.36|ENSG00000041515|chr13:109009038-109009038|T/-|frameshift_variant;MYO16|p.K869Nfs*6|1|0.29|ENSG00000041515|chr13:109019782-109019782|A/-|frameshift_variant;nc|ENSG00000041515|Q9Y6X6-2|MYO16;nc|ENSG00000041515|Q9Y6X6-3|MYO16;nc|ENSG00000041515|Q9Y6X6|MYO16	30.568863376406313	0.6691487505135859	4				NaN	NaN	0	NaN	5302	2871	8171
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8176	23.648	NaN	3064.3	30	0	442.96	0.106	+			3149	ASIDATYAK	9	61	470.242664311087	938.4707756889741	2	470.24249267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASIDATYAK_	ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3	98.58198989935565	0.04066992115528678	4				NaN	NaN	0	NaN	5303	2871	8171
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8177	23.65	NaN	2865	30	0	361.77	0.034			+	45788	VAGLGGPSPPA	11	58	461.75488695699005	921.4952209807801	2	461.754638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VAGLGGPSPPA_	REV__ENST00000479818.5_1_22:50713453-50713714:-|nuORF	40.77816245573522	0.5472954108598816	4				NaN	NaN	0	NaN	5304	2871	8171
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8178	23.651	NaN	2812.3	30	0	797.24	0.139			+	32704	RAIGSPPKK	9	56	477.29780037786	952.5810478225201	2	477.29766845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RAIGSPPKK_	REV__ENSG00000134369|ENST00000685211|NAV1;REV__NAV1|p.K1211Efs*5|1|0.68|ENSG00000134369|chr1:201803700-201803701|AA/-|frameshift_variant;REV__nc|ENSG00000134369|Q8NEY1-2|NAV1;REV__nc|ENSG00000134369|Q8NEY1-3|NAV1;REV__nc|ENSG00000134369|Q8NEY1-4|NAV1;REV__nc|ENSG00000134369|Q8NEY1-5|NAV1;REV__nc|ENSG00000134369|Q8NEY1-6|NAV1;REV__nc|ENSG00000134369|Q8NEY1-7|NAV1;REV__nc|ENSG00000134369|Q8NEY1|NAV1	34.172542307311794	0.4838870758800184	4				NaN	NaN	0	NaN	5305	2871	8171
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8196	23.688	NaN	132790	30	0	67670	0.215	+			32495	QVQAAQFAK	9	80	495.77218360902833	989.5298142848567	2	495.7716064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QVQAAQFAK_	ENSG00000135441|ENST00000548925|BLOC1S1;nc|ENSG00000135441|P78537-2|BLOC1S1	138.8255168832474	0.011031062795199845	4				NaN	NaN	0	NaN	5320	2874	8195
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8197	23.692	NaN	17945	30	0	3196.4	0.106			+	10147	ESSGIAILN	9	71	452.24253474343084	902.4705165536617	2	453.2469177246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ESSGIAILN_	REV__DDAH1|p.N229Tfs*24|1|0.45|ENSG00000153904|chr1:85324797-85324797|G/-|frameshift_variant;REV__ENSG00000153904|ENST00000284031|DDAH1;REV__nc|ENSG00000153904|O94760-2|DDAH1	37.15910966729921	0.4535818937225704	4				NaN	NaN	0	NaN	5321	2874	8195
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8198	23.694	NaN	6781.1	30	0	2082.3	0.106	+			39291	STASFSAVK	9	65	449.2375454892665	896.460538045333	2	449.2372741699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STASFSAVK_	ENSG00000012211|ENST00000599218|PRICKLE3;nc|ENSG00000012211|O43900-2|PRICKLE3	62.107414245175825	0.1960472003779324	4				NaN	NaN	0	NaN	5322	2874	8195
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8199	23.696	NaN	2904.5	30	0	995.13	0.106	+			10518	EVYHTTVLK	9	42	545.3001177207385	1088.585682508277	2	545.3009033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EVYHTTVLK_	ENST00000396185.7_1_3:41241009-41266025:+|nuORF;ENST00000453024.5_1_3:41241021-41265725:+|nuORF	64.20726635412375	0.17854274437659667	4				NaN	NaN	0	NaN	5323	2874	8195
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8200	23.698	NaN	16906	30	0	1486.6	0.106	+			37932	SPEEGARVY	9	88	504.24330254972483	1006.4720521662497	2	504.2431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SPEEGARVY_	ENSG00000131037|ENST00000201647|EPS8L1;ENST00000587715.1_1_19:55598611-55598979:+|nuORF;ENST00000589362.5_1_19:55593317-55598979:+|nuORF;EPS8L1|p.A674V|1|0.11|ENSG00000131037|chr19:55087371-55087371|C/T|missense_variant;nc|ENSG00000131037|Q8TE68-2|EPS8L1;nc|ENSG00000131037|Q8TE68-4|EPS8L1	148.98678547993487	0.0071052929883181565	4				NaN	NaN	0	NaN	5324	2874	8195
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8201	23.699	NaN	14344	30	0	2593.4	0.106	+			16470	HETGTKITI	9	70	500.27709409425546	998.5396352553109	2	500.27679443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HETGTKITI_	ENSG00000073792|ENST00000382199|IGF2BP2;ENST00000496495.1_1_3:185393074-185393625:-|nuORF;ENST00000550858.1_1_12:42681476-42682067:+|nuORF;nc|ENSG00000073792|Q9Y6M1-1|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-3|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-4|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-5|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-6|IGF2BP2	118.74307786436346	0.02196067127630568	4				NaN	NaN	0	NaN	5325	2874	8195
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8202	23.701	NaN	4334.3	30	0	1323.3	0.033			+	3591	ASVITATSK	9	52	439.253266415263	876.491979897326	2	439.2530212402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASVITATSK_	REV__ENST00000566567.1_1_9:139000642-139000753:-|nuORF	47.95952297671804	0.32689736945648856	4				NaN	NaN	0	NaN	5326	2874	8195
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8220	23.739	NaN	105920	30	0	37197	0.214	+			18030	IINSSITTK	9	80	488.7871619851223	975.5597710370446	2	488.7873840332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IINSSITTK_	CCT3|p.A379Lfs*9|1|0.21|ENSG00000163468|chr1:156312061-156312061|C/-|frameshift_variant;CCT3|p.K197Nfs*23|1|0.17|ENSG00000163468|chr1:156320857-156320857|T/-|frameshift_variant;CCT3|p.L350Ffs*9|1|0.49|ENSG00000163468|chr1:156312146-156312147|-/A|frameshift_variant;ENSG00000163468|ENST00000295688|CCT3;nc|ENSG00000163468|P49368-2|CCT3	191.44940797552337	0.00014666235100428603	4				NaN	NaN	0	NaN	5341	2877	8219
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8221	23.742	NaN	28860	30	0	6653.1	0.106	+			48775	VTYHMFRTK	9	73	394.87439760534954	1181.6013634162487	3	394.87481689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTYHMFRTK_	ENST00000453465.1_1_10:21915067-21915193:-|nuORF;ENST00000478691.5_1_1:23664326-23665089:-|nuORF	49.536043120802724	0.308405419312776	4				NaN	NaN	0	NaN	5342	2877	8219
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8222	23.744	NaN	6552.9	30	0	1536.4	0.106	+			5653	AVDIASAAK	9	59	423.24001097792626	844.4654690226525	2	423.2398376464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVDIASAAK_	ENSG00000227057|ENST00000374617|WDR46;ENST00000481025.1_1_6:33255909-33256589:-|nuORF	58.22992032128504	0.22837015374068087	4				NaN	NaN	0	NaN	5343	2877	8219
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8223	23.746	NaN	2808.8	30	0	495.51	0.106	+			27212	MEHSKPVVL	9	59	520.2839298054632	NaN	0	520.2838745117188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MEHSKPVVL_	ENSG00000054654|ENST00000555002|SYNE2;ENST00000394768.6_2_14:64542710-64692241:+|nuORF;ENST00000557024.1_1_14:64625447-64629048:+|nuORF;nc|ENSG00000054654|Q8WXH0-7|SYNE2;nc|ENSG00000054654|Q8WXH0|SYNE2;SYNE2|p.S6651Rfs*83|1|0.29|ENSG00000054654|chr14:64220596-64220597|-/G|frameshift_variant	47.95952297671804	0.22075498469600283	4				NaN	NaN	0	NaN	5344	2877	8219
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8224	23.748	NaN	1484.9	30	0	323.34	0.106			+	23068	KVTSVLVAK	9	44	472.8104813503683	943.6064097675367	2	472.8105163574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KVTSVLVAK_	REV__tr|U7SJJ5|U7SJJ5_FUSNUAminobenzoyl-glutamatetransporterOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02072PE=4SV=1	42.86426827375447	0.38666266728046506	4				NaN	NaN	0	NaN	5345	2877	8219
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8225	23.75	NaN	2540.3	30	0	700.76	0.037				-1	 	0	41	363.54122024554863	1087.6018313368459	3	363.54150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5346	2877	8219
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8226	23.75	NaN	1522.9	30	0	101.6	0.145			+	45526	TYHTLSKETKK	11	56	445.9119192384167	1334.7139283154502	3	446.24609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TYHTLSKETKK_	REV__TMEM63A|p.Y285H|1|0.04|ENSG00000196187|chr1:225862553-225862553|A/G|missense_variant	31.068146907933308	0.6639116734509778	4				NaN	NaN	0	NaN	5347	2877	8219
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8244	23.79	NaN	85839	30	0	23502	0.214	+			39407	STDPSVLGK	9	89	452.24253474343084	902.4705165536617	2	452.2423095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STDPSVLGK_	ENSG00000114315|ENST00000232424|HES1;HES1|p.Y110C|1|0.27|ENSG00000114315|chr3:194137719-194137719|A/G|missense_variant	154.1183686248401	0.005909203230691971	4				NaN	NaN	0	NaN	5362	2880	8243
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8245	23.793	NaN	4122.8	30	0	1359.7	0.106	+			410	AASSVPNLK	9	63	443.7528192807597	885.4910856283194	2	443.7529602050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AASSVPNLK_	ENSG00000130479|ENST00000324096|MAP1S;MAP1S|p.R854Gfs*156|1|0.43|ENSG00000130479|chr19:17727944-17727944|C/-|frameshift_variant;MAP1S|p.S595Vfs*62|1|0.12|ENSG00000130479|chr19:17727160-17727160|C/-|frameshift_variant;MAP1S|p.T554M|1|0.4|ENSG00000130479|chr19:17727045-17727045|C/T|missense_variant;nc|ENSG00000130479|Q66K74-2|MAP1S	47.657333605630114	0.33044192980041115	4				NaN	NaN	0	NaN	5363	2880	8243
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8246	23.795	NaN	2153.6	30	0	718.1	0.106				-1	STCNDLIAK	9	60	511.2524812750023	1020.4904096168046	2	511.2523498535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_STC(Carbamidomethyl (C))NDLIAK_	ENSG00000110048|ENST00000263847|OSBP;ENSG00000184792|ENST00000332585|OSBP2;ENST00000496367.1_1_22:31266465-31268361:+|nuORF;nc|ENSG00000184792|Q969R2-2|OSBP2;nc|ENSG00000184792|Q969R2-3|OSBP2;nc|ENSG00000184792|Q969R2-6|OSBP2;OSBP|p.I255Nfs*16|1|0.03|ENSG00000110048|chr11:59608542-59608543|-/AACATAAT|frameshift_variant	68.84614121027924	0.14577793175421136	4				NaN	NaN	0	NaN	5364	2880	8243
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8247	23.797	NaN	2462.5	30	0	1468.4	0.106	+			41039	SVIDSVTKK	9	24	326.1937633411128	975.5594606235384	3	326.1937561035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVIDSVTKK_	ENSG00000151835|ENST00000382292|SACS;nc|ENSG00000151835|Q9NZJ4-2|SACS;SACS|p.I3485Lfs*10|1|0.24|ENSG00000151835|chr13:23333423-23333423|T/-|frameshift_variant;SACS|p.K2931Nfs*22|1|0.23|ENSG00000151835|chr13:23335083-23335083|T/-|frameshift_variant;SACS|p.L2871Ffs*29|1|0.26|ENSG00000151835|chr13:23335263-23335264|-/A|frameshift_variant;SACS|p.L3102*|1|0.33|ENSG00000151835|chr13:23334571-23334571|A/-|frameshift_variant;SACS|p.S4423Ffs*42|1|0.18|ENSG00000151835|chr13:23330610-23330611|-/G|frameshift_variant	20.94693142431847	0.6074874384046576	4				NaN	NaN	0	NaN	5365	2880	8243
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8248	23.799	NaN	2901.1	30	0	479.03	0.106	+			50874	YFGLVYRI	8	60	515.7875137213841	1029.5604745095682	2	515.78759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YFGLVYRI_	ENSG00000088726|ENST00000314124|TMEM40;ENST00000476331.5_1_3:12776275-12782752:-|nuORF;nc|ENSG00000088726|Q8WWA1-2|TMEM40;nc|ENSG00000088726|Q8WWA1-3|TMEM40	28.2542754592877	0.7411748056684583	4				NaN	NaN	0	NaN	5366	2880	8243
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8249	23.801	NaN	2484.5	30	0	498.82	0.106	+			31742	QPAPSSTSGSY	11	56	541.243334594443	1080.472116255686	2	541.2435913085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QPAPSSTSGSY_	ENSG00000089280|ENST00000254108|FUS;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;FUS|p.P152Lfs*33|1|0.31|ENSG00000089280|chr16:31184324-31184324|C/-|frameshift_variant;nc|ENSG00000089280|P35637-2|FUS	72.2432373244024	0.21703855426835802	4				NaN	NaN	0	NaN	5367	2880	8243
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8250	23.802	NaN	1439.9	30	0	241.62	0.036				-1	MLAVKNITM	9	47	526.7774489874467	1051.5403450416934	2	526.7782592773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Oxidation (M)	_M(Oxidation (M))LAVKNITM(Oxidation (M))_	ENSG00000165078|ENST00000297770|CPA6	37.15910966729921	0.4535818937225704	4				NaN	NaN	0	NaN	5368	2880	8243
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8268	23.84	NaN	103360	30	0	32351	0.211			+	24745	LHSKESFAK	9	96	523.7849227359445	1045.555292538689	2	523.7853393554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LHSKESFAK_	REV__ENSG00000221994|ENST00000276054|ZNF630;REV__nc|ENSG00000221994|Q2M218-2|ZNF630	127.46168284122857	0.016682644177004526	4				NaN	NaN	0	NaN	5383	2883	8267
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8269	23.844	NaN	13455	30	0	3680.7	0.106	+			4340	ATGNVVVMK	9	70	459.7568979511545	917.499242969109	2	459.75726318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATGNVVVMK_	ALDH2|p.A211T|1|0.12|ENSG00000111275|chr12:111790512-111790512|G/A|missense_variant;ENSG00000111275|ENST00000261733|ALDH2;ENST00000548536.1_1_12:112213467-112247376:+|nuORF;nc|ENSG00000111275|P05091-2|ALDH2	190.2614974402762	0.00026591377982909756	4				NaN	NaN	0	NaN	5384	2883	8267
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8270	23.846	NaN	12324	30	0	1686.5	0.106	+			15924	HADGTIVRY	9	75	516.2668736799101	1030.51919442662	2	516.2677612304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HADGTIVRY_	ENSG00000138002|ENST00000260570|IFT172;ENST00000476264.6_1_2:27703990-27712589:-|nuORF;ENST00000507184.5_1_2:27680991-27709067:-|nuORF;ENST00000511842.5_1_2:27693746-27712529:-|nuORF;IFT172|p.G252Afs*6|1|0.19|ENSG00000138002|chr2:27481076-27481076|C/-|frameshift_variant;IFT172|p.W628Qfs*6|1|0.03|ENSG00000138002|chr2:27465466-27465467|-/CATTG|frameshift_variant;nc|ENSG00000138002|Q9UG01-2|IFT172;nc|ENSG00000138002|Q9UG01-3|IFT172	118.74307786436346	0.02196067127630568	4				NaN	NaN	0	NaN	5385	2883	8267
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8271	23.847	NaN	4269.9	30	0	492.28	0.106	+			39398	STDPAAPNLK	10	58	507.26658947391803	1012.5186260146361	2	507.2666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STDPAAPNLK_	ENSG00000137076|ENST00000314888|TLN1;nc|ENSG00000137076|Q9Y490-2|TLN1;TLN1|p.P1628Rfs*20|1|0.44|ENSG00000137076|chr9:35707144-35707144|G/-|frameshift_variant	93.1432384553994	0.11307820852620741	4				NaN	NaN	0	NaN	5386	2883	8267
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8272	23.849	NaN	2656.2	30	0	353.21	0.106	+			49318	VVSADLPNA	9	59	443.2373227817123	884.4600926302246	2	443.2375183105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVSADLPNA_	ENSG00000123384|ENST00000243077|LRP1;LRP1|p.R3469Gfs*24|2|0.38|ENSG00000123384|chr12:57201552-57201552|C/-|frameshift_variant	42.396135135203025	0.392153681582562	4				NaN	NaN	0	NaN	5387	2883	8267
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8273	23.851	NaN	3120.9	30	0	571.92	0.035	+			37947	SPEPGQRTF	9	62	509.7511334004687	1017.4877138677374	2	509.7511901855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SPEPGQRTF_	ENSG00000156273|ENST00000286800|BACH1	85.16082228582465	0.07850854922700509	4				NaN	NaN	0	NaN	5388	2883	8267
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8274	23.852	NaN	7321.2	30	0	1208.9	0.141	+			20677	KGNLREYLQ	9	75	560.8090256119594	1119.6034982907188	2	560.8094482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KGNLREYLQ_	ENSG00000077782|ENST00000447712|FGFR1;ENST00000526570.5_1_8:38271148-38285795:-|nuORF;nc|ENSG00000077782|P11362-10|FGFR1;nc|ENSG00000077782|P11362-11|FGFR1;nc|ENSG00000077782|P11362-12|FGFR1;nc|ENSG00000077782|P11362-13|FGFR1;nc|ENSG00000077782|P11362-14|FGFR1;nc|ENSG00000077782|P11362-19|FGFR1;nc|ENSG00000077782|P11362-2|FGFR1;nc|ENSG00000077782|P11362-20|FGFR1;nc|ENSG00000077782|P11362-21|FGFR1;nc|ENSG00000077782|P11362-3|FGFR1;nc|ENSG00000077782|P11362-4|FGFR1;nc|ENSG00000077782|P11362-5|FGFR1;nc|ENSG00000077782|P11362-6|FGFR1;nc|ENSG00000077782|P11362-7|FGFR1;nc|ENSG00000077782|P11362-8|FGFR1;nc|ENSG00000077782|P11362-9|FGFR1	56.72105179125745	0.24094814563026265	4				NaN	NaN	0	NaN	5389	2883	8267
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8292	23.891	NaN	4094.5	30	0	685.87	0.214	+			36386	SETKGVAL	8	65	402.72664530048684	803.4387376677737	2	402.7265930175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SETKGVAL_	ENSG00000206075|ENST00000382771|SERPINB5	58.78195531508484	0.5138399468736706	4				NaN	NaN	0	NaN	5404	2886	8291
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8293	23.895	NaN	9471.6	30	0	1283.6	0.106	+			40466	STVSADPVVK	10	67	501.77710228292347	1001.539651632647	2	501.77679443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STVSADPVVK_	ENSG00000136051|ENST00000332180|WASHC4	126.24258497203832	0.01851300475414303	4				NaN	NaN	0	NaN	5405	2886	8291
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8294	23.897	NaN	2454.7	30	0	281.79	0.106	+			44810	TTRPRDSH	8	54	485.248698463143	968.482843993086	2	485.24761962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TTRPRDSH_	ENSG00000164638|ENST00000396872|SLC29A4;nc|ENSG00000164638|Q7RTT9-2|SLC29A4	37.15910966729921	0.6739408393984688	4				NaN	NaN	0	NaN	5406	2886	8291
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8295	23.898	NaN	2564.2	30	0	359.82	0.106			+	36903	SIHQAKHE	8	58	475.24520865200265	948.4758643708053	2	475.2451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SIHQAKHE_	REV__ENSG00000136111|ENST00000377636|TBC1D4;REV__nc|ENSG00000136111|O60343-2|TBC1D4;REV__nc|ENSG00000136111|O60343-3|TBC1D4;REV__TBC1D4|p.F159Sfs*16|1|0.14|ENSG00000136111|chr13:75481292-75481292|A/-|frameshift_variant;REV__TBC1D4|p.H517Pfs*9|1|0.07|ENSG00000136111|chr13:75341186-75341187|-/TCTTTAG|frameshift_variant;REV__TBC1D4|p.S219Qfs*19|1|0.23|ENSG00000136111|chr13:75362452-75362452|G/-|frameshift_variant	56.72105179125745	0.5342425954139568	4				NaN	NaN	0	NaN	5407	2886	8291
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8296	23.9	NaN	4815.3	30	0	2551.4	0.106	+			396	AASILGKPA	9	52	414.2527303147053	826.4909076962106	2	414.2527160644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AASILGKPA_	ENSG00000099974|ENST00000215770|DDTL;ENSG00000099977|ENST00000398344|DDT;ENST00000444947.2_1_22:24315904-24316657:-|nuORF;nc|ENSG00000099977|P30046-2|DDT	49.44154591367651	0.3095138337212152	4				NaN	NaN	0	NaN	5408	2886	8291
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8297	23.902	NaN	2764.3	30	0	317.32	0.036	+			14740	GTKEDVDVLK	10	61	552.3008880225849	1102.5872231119697	2	552.300537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTKEDVDVLK_	ENSG00000022277|ENST00000357348|RTF2	90.14881205920913	0.1302219035121668	4				NaN	NaN	0	NaN	5409	2886	8291
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8298	23.903	NaN	1969.6	30	0	247.64	0.14	+			34893	SAAASGGLLK	10	56	437.7532238594652	873.4918947857304	2	438.2506408691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SAAASGGLLK_	ENSG00000175073|ENST00000310421|VCPIP1;VCPIP1|p.A460Qfs*2|1|0.36|ENSG00000175073|chr8:66665582-66665582|T/-|frameshift_variant;VCPIP1|p.K1108Nfs*37|1|0.15|ENSG00000175073|chr8:66634846-66634846|T/-|frameshift_variant	56.43379154798735	0.3982744522255666	4				NaN	NaN	0	NaN	5410	2886	8291
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8316	23.941	NaN	8726.1	30	0	3314.2	0.214	+			30966	QEQAAKAVL	9	57	479.27164083597347	956.528728738747	2	479.2716979980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QEQAAKAVL_	ENSG00000130119|ENST00000360845|GNL3L	98.62937762414208	0.04060045538121712	4				NaN	NaN	0	NaN	5425	2889	8315
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8317	23.944	NaN	4165.5	30	0	1514.1	0.106			+	2861	ASAPLGDVPQI	11	29	356.52898294983254	1066.5651194496977	3	356.5290832519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASAPLGDVPQI_	REV__LTR1_dup85|chr7:101629186-101629993:-|1.8197208364654407|0.0003248618387484|12.45|329.0|24|1|anti-sense	14.137123925751023	0.8042936413770803	4				NaN	NaN	0	NaN	5426	2889	8315
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8318	23.946	NaN	9390.6	30	0	3025.5	0.106	+			50543	YARSVHEEF	9	43	379.8486687735751	1136.5241769209254	3	379.8486633300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YARSVHEEF_	ENSG00000078808|ENST00000360001|SDF4;ENST00000465727.5_1_1:1152894-1153089:-|nuORF;ENST00000478938.1_1_1:1152894-1154464:-|nuORF;ENST00000494748.1_1_1:1152894-1154464:-|nuORF;nc|ENSG00000078808|Q9BRK5-2|SDF4;nc|ENSG00000078808|Q9BRK5-5|SDF4;nc|ENSG00000078808|Q9BRK5|SDF4	58.78195531508484	0.22376836668196862	4				NaN	NaN	0	NaN	5427	2889	8315
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8319	23.948	NaN	10514	30	0	1451.1	0.106	+			34894	SAAASGGLLK	10	66	437.7532238594652	873.4918947857304	2	437.7528991699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SAAASGGLLK_	ENSG00000175073|ENST00000310421|VCPIP1;VCPIP1|p.A460Qfs*2|1|0.36|ENSG00000175073|chr8:66665582-66665582|T/-|frameshift_variant;VCPIP1|p.K1108Nfs*37|1|0.15|ENSG00000175073|chr8:66634846-66634846|T/-|frameshift_variant	117.81106730687013	0.030421278947300796	4				NaN	NaN	0	NaN	5428	2889	8315
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8320	23.95	NaN	3395.9	30	0	298.93	0.106				-1	 	0	55	420.7643792779644	839.5142056227288	2	420.7642822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5429	2889	8315
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8321	23.952	NaN	2494.4	30	0	526.59	0.036				-1	RMREKRTG	8	52	350.5256019389245	1048.5549764169737	3	350.5257263183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_RM(Oxidation (M))REKRTG_	ENST00000392110.6_1_2:219524819-219525738:+|nuORF	32.81241826257853	0.7059802730411993	4				NaN	NaN	0	NaN	5430	2889	8315
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8322	23.952	NaN	25546	30	0	4077.4	0.139	+			33447	RILSGVVTK	9	92	486.8133302242839	971.6121075153678	2	486.8138122558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RILSGVVTK_	ENSG00000142534|ENST00000270625|RPS11	72.2432373244024	0.13108886737667413	4				NaN	NaN	0	NaN	5431	2889	8315
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8339	23.989	NaN	22894	30	0	7249.9	0.215	+			43670	TKAEGVAL	8	67	394.7290913922802	787.4436298513605	2	394.72906494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TKAEGVAL_	ENSG00000103710|ENST00000220062|RASL12;nc|ENSG00000103710|Q9NYN1-2|RASL12;nc|ENSG00000103710|Q9NYN1-3|RASL12	90.77665401227738	0.27511901818546464	4				NaN	NaN	0	NaN	5445	2892	8338
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8340	23.992	NaN	10402	30	0	2164	0.106	+			5274	ATVETTIAR	9	72	481.26906523408854	NaN	0	481.2689514160156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATVETTIAR_	ENSG00000064042|ENST00000503057|LIMCH1;LIMCH1|p.K805Rfs*20|1|0.37|ENSG00000064042|chr4:41680049-41680049|A/-|frameshift_variant;LIMCH1|p.T960Pfs*48|1|0.18|ENSG00000064042|chr4:41685768-41685768|A/-|frameshift_variant;nc|ENSG00000064042|Q9UPQ0-10|LIMCH1;nc|ENSG00000064042|Q9UPQ0-2|LIMCH1;nc|ENSG00000064042|Q9UPQ0-3|LIMCH1;nc|ENSG00000064042|Q9UPQ0-4|LIMCH1;nc|ENSG00000064042|Q9UPQ0-5|LIMCH1;nc|ENSG00000064042|Q9UPQ0-6|LIMCH1;nc|ENSG00000064042|Q9UPQ0-8|LIMCH1;nc|ENSG00000064042|Q9UPQ0-9|LIMCH1;nc|ENSG00000064042|Q9UPQ0|LIMCH1	176.44474024533739	0.005964492135656625	4				NaN	NaN	0	NaN	5446	2892	8338
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8341	23.994	NaN	13227	30	0	2398.8	0.106	+			4426	ATIEETYSK	9	73	521.2583201176946	1040.502087302189	2	521.2584228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATIEETYSK_	ENSG00000130475|ENST00000596536|FCHO1;ENST00000601247.5_1_19:17858586-17877404:+|nuORF;FCHO1|p.A50V|1|0.36|ENSG00000130475|chr19:17764404-17764404|C/T|missense_variant;nc|ENSG00000130475|O14526-2|FCHO1	131.61620852596164	0.014413238321579053	4				NaN	NaN	0	NaN	5447	2892	8338
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8342	23.996	NaN	4269.5	30	0	483.81	0.106			+	21880	KRPELINK	8	68	499.3110465376321	996.6075401420642	2	499.31097412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KRPELINK_	REV__ENST00000473739.5_1_X:18912213-18919671:-|nuORF	95.81516180277367	0.2598660847282228	4				NaN	NaN	0	NaN	5448	2892	8338
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8343	23.998	NaN	3184.7	30	0	459.71	0.106	+			35226	SALDAITKK	9	61	473.7817073738311	945.5488618144623	2	473.78155517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SALDAITKK_	tr|U7SL85|U7SL85_FUSNUABCtransporterdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02014PE=4SV=1	101.60071028292904	0.0375685401170269	4				NaN	NaN	0	NaN	5449	2892	8338
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8344	24	NaN	3850.8	30	0	525.95	0.106	+			18665	ISVVSATK	8	62	402.7448015461222	803.4750501590444	2	402.7447814941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ISVVSATK_	ACIN1|p.E945Lfs*13|1|0.03|ENSG00000100813|chr14:23063514-23063515|-/AG|frameshift_variant;ENSG00000100813|ENST00000605057|ACIN1;nc|ENSG00000100813|Q9UKV3-2|ACIN1;nc|ENSG00000100813|Q9UKV3-3|ACIN1;nc|ENSG00000100813|Q9UKV3|ACIN1	63.30626980617807	0.4690498839812213	4				NaN	NaN	0	NaN	5450	2892	8338
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8345	24.001	NaN	1474	30	0	934.47	0.036			+	-1	ALLMKMKPA	9	23	340.19720403504505	1017.5697827053352	3	340.1973571777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_ALLMKM(Oxidation (M))KPA_	REV__ENST00000486829.1_1_3:56916324-56992886:-|nuORF	21.9598887501803	0.5980208138527809	4				NaN	NaN	0	NaN	5451	2892	8338
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8363	24.039	NaN	3493.9	30	0	338.72	0.214	+			33929	RSADLTGLEK	10	67	545.2984080322856	1088.582263131371	2	545.2990112304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RSADLTGLEK_	ENSG00000196878|ENST00000356082|LAMB3	80.91624569148213	0.18813531420570515	4				NaN	NaN	0	NaN	5466	2895	8362
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8364	24.043	NaN	3054.6	30	0	698.74	0.106			+	36530	SFGGARSL	8	49	397.7112987386617	793.4080445441234	2	397.7113037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SFGGARSL_	REV__ENST00000454225.1_1_X:71525242-71526668:-|nuORF	30.317721548370564	0.7252424349988982	4				NaN	NaN	0	NaN	5467	2895	8362
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8365	24.045	NaN	2436.4	30	0	654.17	0.106			+	13373	GLAQGFLRE	9	54	495.77218360902833	989.5298142848567	2	495.77203369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GLAQGFLRE_	REV__ENST00000498611.5_1_22:50657979-50682900:-|nuORF	45.9519527083369	0.35044536499095585	4				NaN	NaN	0	NaN	5468	2895	8362
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8366	24.046	NaN	1316	30	0	175.54	0.106	+			43943	TPCTPHTTY	9	56	510.72613525390625	NaN	0	510.72613525390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TPCTPHTTY_	ENSG00000213445|ENST00000534313|SIPA1;SIPA1|p.A787Pfs*12|1|0.27|ENSG00000213445|chr11:65649309-65649309|G/-|frameshift_variant	40.5726180659479	0.27166212580479165	4				NaN	NaN	0	NaN	5469	2895	8362
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8367	24.048	NaN	2362.5	30	0	501.92	0.106	+			22485	KTNFTSIP	8	55	454.2476969548308	906.4808409764616	2	454.24700927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KTNFTSIP_	ENSG00000102057|ENST00000218176|KCND1	34.172542307311794	0.6954784234644539	4				NaN	NaN	0	NaN	5470	2895	8362
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8368	24.05	NaN	943.12	30	0	88.723	0.106			+	9005	EGAARHER	8	44	463.23455810546875	NaN	0	463.23455810546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EGAARHER_	REV__nc|ENSG00000152092|O14525|ASTN1	44.116797842482775	1.7418937515398478	4				NaN	NaN	0	NaN	5471	2895	8362
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8369	24.052	NaN	1866.9	30	0	212.2	0.035				-1	LIDEMVGKG	9	54	489.25288201082157	NaN	0	489.25537109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_LIDEM(Oxidation (M))VGKG_	ENSG00000102218|ENST00000218340|RP2	42.396135135203025	0.2590952873412954	4				NaN	NaN	0	NaN	5472	2895	8362
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8387	24.089	NaN	5421.6	30	0	809.42	0.214	+			39160	SSVSLSLKG	9	57	439.25304110495443	876.4915292767089	2	439.2528991699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSVSLSLKG_	ENSG00000137270|ENST00000259803|GCM1	44.116797842482775	0.37197099687881774	4				NaN	NaN	0	NaN	5487	2898	8386
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8388	24.093	NaN	3524.3	30	0	332.75	0.106	+			22925	KVQDSVLIK	9	64	515.318493594167	1028.6224342551338	2	515.31884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVQDSVLIK_	ENSG00000107290|ENST00000224140|SETX;nc|ENSG00000107290|Q7Z333-3|SETX;nc|ENSG00000107290|Q7Z333-4|SETX;SETX|p.F1748Sfs*3|1|0.55|ENSG00000107290|chr9:132326355-132326355|A/-|frameshift_variant;SETX|p.G1134Efs*24|1|0.34|ENSG00000107290|chr9:132328199-132328199|T/-|frameshift_variant;SETX|p.G1252Dfs*9|2|0.2|ENSG00000107290|chr9:132327843-132327843|C/-|frameshift_variant;SETX|p.I2020Nfs*4|1|0.32|ENSG00000107290|chr9:132295919-132295920|-/T|frameshift_variant;SETX|p.N1361Ifs*53|1|0.11|ENSG00000107290|chr9:132327516-132327516|T/-|frameshift_variant;SETX|p.S1600*|1|0.07|ENSG00000107290|chr9:132326800-132326801|-/A|frameshift_variant;SETX|p.T2478Sfs*35|1|0.35|ENSG00000107290|chr9:132264836-132264840|TATGG/-|frameshift_variant	99.01295224348159	0.040209060045561164	4				NaN	NaN	0	NaN	5488	2898	8386
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8389	24.095	NaN	7614.4	30	0	855.67	0.106	+			8789	EEIRRKFEE	9	79	412.5503645930676	1234.629264379403	3	412.550537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EEIRRKFEE_	ENSG00000111879|ENST00000338891|FAM184A;FAM184A|p.D182Tfs*21|1|0.26|ENSG00000111879|chr6:119024430-119024430|T/-|frameshift_variant;FAM184A|p.L424Ffs*10|1|0.45|ENSG00000111879|chr6:119020038-119020039|-/A|frameshift_variant;nc|ENSG00000111879|Q8NB25-2|FAM184A;nc|ENSG00000111879|Q8NB25-3|FAM184A;nc|ENSG00000111879|Q8NB25-4|FAM184A	54.722347961057174	0.257609425301511	4				NaN	NaN	0	NaN	5489	2898	8386
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8390	24.097	NaN	3591.4	30	0	265.9	0.106	+			34416	RTTFLHISK	9	56	368.21709064123513	1101.6294425239055	3	368.2171630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RTTFLHISK_	ENSG00000169692|ENST00000371696|AGPAT2;ENST00000472820.1_1_9:139568206-139571631:-|nuORF;nc|ENSG00000169692|O15120-2|AGPAT2	58.2462437865262	0.22823408064396822	4				NaN	NaN	0	NaN	5490	2898	8386
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8391	24.099	NaN	7659.4	30	0	2856.5	0.106	+			14016	GSFKQLTVK	9	60	504.2979549051063	1006.5813568770126	2	504.2981872558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GSFKQLTVK_	ENSG00000167283|ENST00000300688|ATP5MG;ENSG00000249222|ENST00000505920|ATP5MGL;ENST00000527186.1_1_11:118277587-118279810:+|nuORF;ENST00000534385.1_1_11:118272380-118277824:+|nuORF	123.20810148215591	0.019257656778428764	4				NaN	NaN	0	NaN	5491	2898	8386
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8392	24.1	NaN	1831.9	30	0	286.79	0.034				-1	TLCLKMVV	8	59	482.27167117681194	NaN	0	482.2719421386719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_TLC(Carbamidomethyl (C))LKMVV_	ENSG00000172324|ENST00000302040|OR5A2	35.200714571348534	1.7418937515398478	4				NaN	NaN	0	NaN	5492	2898	8386
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8393	24.101	NaN	2916.6	30	0	543.42	0.138			+	44331	TSGGGLHAL	9	44	406.716458515446	NaN	0	406.71612548828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TSGGGLHAL_	REV__ENSG00000163902|ENST00000296255|RPN1;REV__ENST00000481168.1_1_3:128363760-128369658:-|nuORF;REV__ENST00000497415.1_1_3:128359957-128369658:-|nuORF	52.29916861842294	0.1908481487866478	4				NaN	NaN	0	NaN	5493	2898	8386
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8411	24.14	NaN	9085.6	30	0	1315.1	0.214	+			5757	AVGKTSFLR	9	71	489.7898876821028	977.5652224310056	2	489.7897644042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVGKTSFLR_	ENSG00000130038|ENST00000440314|CRACR2A	128.60217544463768	0.015992218256422188	4				NaN	NaN	0	NaN	5508	2901	8410
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8412	24.144	NaN	34750	30	0	7776	0.106	+			36856	SIFKQPVTK	9	83	524.3131037292209	1046.6116545252416	2	524.3135375976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SIFKQPVTK_	ENSG00000071655|ENST00000434436|MBD3;ENSG00000134046|ENST00000256429|MBD2;ENST00000590830.5_1_19:1578341-1584901:-|nuORF;nc|ENSG00000071655|O95983-2|MBD3	168.25843898104137	0.0030641937004078144	4				NaN	NaN	0	NaN	5509	2901	8410
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8413	24.146	NaN	7476.9	30	0	2124.8	0.106			+	41225	SVLERFAG	8	62	439.740060121553	877.465567309906	2	439.7400207519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVLERFAG_	REV__ENSG00000031698|ENST00000234677|SARS1;REV__ENST00000468588.1_1_1:109779017-109779290:+|nuORF	71.29570347882199	0.39610197767395533	4				NaN	NaN	0	NaN	5510	2901	8410
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8414	24.148	NaN	31601	30	0	9766.7	0.106	+			45218	TVNTSLVGK	9	77	459.7672577058645	917.519962478529	2	459.7660827636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TVNTSLVGK_	CCDC66|p.A265Sfs*9|1|0.15|ENSG00000180376|chr3:56567024-56567025|-/A|frameshift_variant;CCDC66|p.T207Nfs*2|2|0.31|ENSG00000180376|chr3:56566661-56566662|-/A|frameshift_variant;CCDC66|p.V732*|1|0.25|ENSG00000180376|chr3:56617454-56617454|A/-|frameshift_variant;ENSG00000180376|ENST00000394672|CCDC66;ENST00000422788.5_1_3:56595403-56599181:+|nuORF;ENST00000469966.1_1_3:56592935-56598176:+|nuORF;ENST00000472582.5_1_3:56591255-56599181:+|nuORF;nc|ENSG00000180376|A2RUB6-2|CCDC66;nc|ENSG00000180376|A2RUB6-3|CCDC66;nc|ENSG00000180376|A2RUB6-4|CCDC66	122.93914200107957	0.019420478173996256	4				NaN	NaN	0	NaN	5511	2901	8410
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8415	24.149	NaN	3981.7	30	0	460.93	0.106	+			47945	VSMDYAISK	9	68	515.2500389964719	1028.4855250597436	2	515.2501220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_VSM(Oxidation (M))DYAISK_	ENSG00000196453|ENST00000247930|ZNF777;ZNF777|p.P504Rfs*5|1|0.44|ENSG00000196453|chr7:149432761-149432761|G/-|frameshift_variant	101.45984612302182	0.0377122763612125	4				NaN	NaN	0	NaN	5512	2901	8410
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8416	24.151	NaN	2745.2	30	0	347.89	0.106	+			9230	EGTDVGKVK	9	61	466.7559222129133	931.4972914926266	2	466.7558288574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EGTDVGKVK_	ENSG00000141161|ENST00000394570|UNC45B;nc|ENSG00000141161|Q8IWX7-2|UNC45B;nc|ENSG00000141161|Q8IWX7|UNC45B	45.97224482568171	0.3502073465782774	4				NaN	NaN	0	NaN	5513	2901	8410
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8417	24.153	NaN	658.8	30	0	112.9	0.036			+	18707	ITEKFSGER	9	49	533.7807006835938	NaN	0	533.7807006835938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ITEKFSGER_	REV__ENSG00000064102|ENST00000261191|INTS13;REV__nc|ENSG00000064102|Q9NVM9-2|INTS13	40.77816245573522	0.2702456086868081	4				NaN	NaN	0	NaN	5514	2901	8410
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8435	24.19	NaN	9625.4	30	0	1924.9	0.214	+			43165	TETHVERVL	9	64	542.2931360913798	1082.5717192495595	2	542.2936401367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TETHVERVL_	ENSG00000076201|ENST00000265562|PTPN23;PTPN23|p.L1513Wfs*71|1|0.44|ENSG00000076201|chr3:47412805-47412805|G/-|frameshift_variant	88.17693792209575	0.07000514020414955	4				NaN	NaN	0	NaN	5529	2904	8434
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8436	24.193	NaN	9100.2	30	0	2551	0.106	+			6534	AYGASKTF	8	55	422.7134761428065	843.412399352413	2	422.7134094238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AYGASKTF_	ENSG00000132383|ENST00000254719|RPA1;RPA1|p.N274Mfs*5|1|0.18|ENSG00000132383|chr17:1879272-1879272|A/-|frameshift_variant	98.62937762414208	0.25143494708580966	4				NaN	NaN	0	NaN	5530	2904	8434
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8437	24.195	NaN	6418	30	0	1108.3	0.106	+			45198	TVNPKESILK	10	73	564.8347479084448	1127.6549428836895	2	564.834716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVNPKESILK_	ENSG00000139687|ENST00000267163|RB1;RB1|p.L561Mfs*9|1|0.07|ENSG00000139687|chr13:48381428-48381432|CCTTG/-|frameshift_variant;RB1|p.V654Cfs*4|1|0.33|ENSG00000139687|chr13:48456343-48456343|A/-|frameshift_variant;RB1|p.Y529*|1|0.23|ENSG00000139687|chr13:48381334-48381335|AC/-|frameshift_variant;RB1|p.Y529Tfs*3|1|0.08|ENSG00000139687|chr13:48381329-48381329|T/-|frameshift_variant	114.85826248499774	0.03459167991829056	4				NaN	NaN	0	NaN	5531	2904	8434
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8438	24.197	NaN	4090.5	30	0	886.5	0.106				-1	QKCGPLRSL	9	58	529.7932739257812	NaN	0	529.7932739257812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_QKC(Carbamidomethyl (C))GPLRSL_	MCM10|p.S150Cfs*5|1|0.03|ENSG00000065328|chr10:13172474-13172475|-/GCGGG|frameshift_variant	58.78195531508484	0.1545138866451181	4				NaN	NaN	0	NaN	5532	2904	8434
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8439	24.199	NaN	2338	30	0	563.39	0.106				-1	LSEALCAAN	9	62	474.7259006705331	947.4372484078663	2	474.7272644042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_LSEALC(Carbamidomethyl (C))AAN_	ENSG00000126003|ENST00000246229|PLAGL2;ENST00000510707.1_1_4:85165918-85166545:+|nuORF	42.396135135203025	0.392153681582562	4				NaN	NaN	0	NaN	5533	2904	8434
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8440	24.201	NaN	1589.8	30	0	320.75	0.034	+			6369	AVTVAPPGAR	10	50	469.7742657411458	937.5339785490917	2	469.7738952636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AVTVAPPGAR_	ENSG00000153187|ENST00000640218|HNRNPU;ENST00000476241.2_2_1:245025757-245027609:-|nuORF;nc|ENSG00000153187|Q00839-2|HNRNPU	64.20726635412375	0.3275756395432415	4				NaN	NaN	0	NaN	5534	2904	8434
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8441	24.201	NaN	1897.1	30	0	581.09	0.143			+	26084	LSMLACITTLP	11	50	407.21732111036977	NaN	0	407.2176208496094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_LSMLAC(Carbamidomethyl (C))ITTLP_	REV__ENST00000216129.6_1_22:43563456-43563771:-|nuORF	47.227680397652996	0.33523056580093125	4				NaN	NaN	0	NaN	5535	2904	8434
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8459	24.24	NaN	13564	30	0	1717	0.214			+	11287	FKGAISPK	8	72	424.2553345427257	846.4961161522514	2	424.2552795410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FKGAISPK_	REV__ENSG00000166948|ENST00000202625|TGM6;REV__nc|ENSG00000166948|O95932-2|TGM6	115.45897859103373	0.24104770225811847	4				NaN	NaN	0	NaN	5550	2907	8458
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8460	24.243	NaN	2622.9	30	0	435.11	0.106	+			26498	LTMKVAVNK	9	63	502.3021090717933	1002.5896652103867	2	502.30169677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LTMKVAVNK_	ENST00000418474.1_1_2:160472985-160473165:+|nuORF	93.19546047674547	0.05585629608842056	4				NaN	NaN	0	NaN	5551	2907	8458
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8461	24.245	NaN	12960	30	0	6359.7	0.106	+			27369	MKAYEPKLTP	10	61	393.21502114848806	1176.6232340456643	3	393.2151184082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MKAYEPKLTP_	NIPBL|p.R1181M|1|0.32|ENSG00000164190|chr5:37000856-37000856|G/T|missense_variant	33.921630207806714	0.6028135429846169	4				NaN	NaN	0	NaN	5552	2907	8458
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8462	24.247	NaN	3726.4	30	0	1058.3	0.106			+	1724	AHARGLVL	8	48	418.75882859758076	835.5031042619615	2	418.7587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AHARGLVL_	REV__nc|ENSG00000134668|Q6ZMY3-4|SPOCD1	28.2542754592877	0.7411748056684583	4				NaN	NaN	0	NaN	5553	2907	8458
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8463	24.249	NaN	8245.5	30	0	3160.1	0.106	+			37652	SLQQVRQQLK	10	51	409.9101733159464	1226.7086905480392	3	409.91021728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SLQQVRQQLK_	ENSG00000115415|ENST00000361099|STAT1;nc|ENSG00000115415|P42224-2|STAT1;STAT1|p.D534Mfs*14|1|0.24|ENSG00000115415|chr2:190980653-190980653|G/-|frameshift_variant;STAT1|p.K567Nfs*25|2|0.2|ENSG00000115415|chr2:190979798-190979798|T/-|frameshift_variant	28.081489160057373	0.6505064946289502	4				NaN	NaN	0	NaN	5554	2907	8458
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8464	24.251	NaN	2534.3	30	0	247.38	0.106			+	27805	MSGLQRNP	8	61	451.72959553859926	NaN	0	451.2767028808594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MSGLQRNP_	REV__ENSG00000204599|ENST00000396551|TRIM39;REV__nc|ENSG00000204599|Q9HCM9|TRIM39	57.81127852772723	1.7418937515398478	4				NaN	NaN	0	NaN	5555	2907	8458
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8465	24.252	NaN	3093.9	30	0	545.56	0.035			+	12917	GESHHTVTL	9	63	490.74382542763186	979.4730979220637	2	490.74395751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GESHHTVTL_	REV__ENST00000497914.5_1_7:43919356-43945301:-|nuORF	53.351449002276354	0.2690372970092375	4				NaN	NaN	0	NaN	5556	2907	8458
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8483	24.288	NaN	75834	30	0	29633	0.211	+			46916	VIVDSTVGK	9	79	459.2684266107368	NaN	0	459.2682800292969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VIVDSTVGK_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	88.17693792209575	0.04527150213038833	4				NaN	NaN	0	NaN	5571	2910	8482
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8484	24.291	NaN	6823.8	30	0	1016.4	0.106	+			17266	HYVEKPSTF	9	65	554.2774949401739	1106.5404369471478	2	554.2776489257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HYVEKPSTF_	ENSG00000144591|ENST00000313597|GMPPA;ENST00000481170.1_1_2:220366576-220368936:+|nuORF;nc|ENSG00000144591|Q96IJ6-2|GMPPA	67.49366992349736	0.1516260258713357	4				NaN	NaN	0	NaN	5572	2910	8482
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8485	24.293	NaN	12300	30	0	3346.7	0.106	+			34670	RVSECLRVLK	10	83	420.5797574538337	NaN	0	420.57965087890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_RVSEC(Carbamidomethyl (C))LRVLK_	ENSG00000158006|ENST00000374282|PAFAH2	73.84112541714126	0.12976974590634552	4				NaN	NaN	0	NaN	5573	2910	8482
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8486	24.295	NaN	27927	30	0	13892	0.106	+			48854	VVCEYIVKK	9	70	379.88263319584223	1136.6260701877268	3	379.88262939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_VVC(Carbamidomethyl (C))EYIVKK_	EIF2S3|p.I441Nfs*4|1|0.29|ENSG00000130741|chrX:24073223-24073224|-/A|frameshift_variant;ENSG00000130741|ENST00000253039|EIF2S3;ENSG00000180574|ENST00000538173|EIF2S3B;nc|ENSG00000180574|Q2VIR3-2|EIF2S3B	107.00750918261382	0.032051501805654005	4				NaN	NaN	0	NaN	5574	2910	8482
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8487	24.297	NaN	2965.4	30	0	294.05	0.106	+			1723	AHALVPAPQE	10	61	516.7770995886771	1031.539646244154	2	517.2711181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AHALVPAPQE_	ENSG00000076650|ENST00000170564|GPATCH1;ENST00000592262.1_1_19:33604586-33621063:+|nuORF	27.882242232435846	0.6521336255503853	4				NaN	NaN	0	NaN	5575	2910	8482
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8488	24.299	NaN	6012.2	30	0	2675	0.106	+			41652	SVQVMALKK	9	42	335.20359288862744	1002.5889492660824	3	335.20361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVQVMALKK_	ENSG00000064419|ENST00000265388|TNPO3;nc|ENSG00000064419|Q9Y5L0-1|TNPO3;nc|ENSG00000064419|Q9Y5L0-3|TNPO3;nc|ENSG00000064419|Q9Y5L0-5|TNPO3;TNPO3|p.N628Mfs*22|1|0.13|ENSG00000064419|chr7:128980008-128980008|T/-|frameshift_variant	19.996771675451527	0.6112419832031292	4				NaN	NaN	0	NaN	5576	2910	8482
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8489	24.301	NaN	908.7	30	0	99.727	0.036	+			8295	EAIQRTEAY	9	45	540.7693948127878	1079.5242366923756	2	540.7698364257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EAIQRTEAY_	ENSG00000148396|ENST00000684901|SEC16A;nc|ENSG00000148396|O15027-2|SEC16A;nc|ENSG00000148396|O15027-3|SEC16A;nc|ENSG00000148396|O15027-4|SEC16A;nc|ENSG00000148396|O15027-5|SEC16A;SEC16A|p.P2155Hfs*25|1|0.25|ENSG00000148396|chr9:136447664-136447664|G/-|frameshift_variant	84.9155231211612	0.07920012719736333	4				NaN	NaN	0	NaN	5577	2910	8482
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8507	24.337	NaN	3446.6	30	0	1419.6	0.214	+			42270	TAAVKMTLK	9	66	481.7887457509287	961.5629385686574	2	481.7889099121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAAVKMTLK_	ENST00000604354.1_1_5:180743383-180748792:+|nuORF	49.44154591367651	0.3095138337212152	4				NaN	NaN	0	NaN	5592	2913	8506
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8508	24.34	NaN	2675.1	30	0	185.92	0.106			+	43931	TPAPGPPPG	9	52	395.7083245325726	789.4020961319452	2	395.70831298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TPAPGPPPG_	REV__ENSG00000266714|ENST00000645453|MYO15B	50.0245360154114	0.3026755932229825	4				NaN	NaN	0	NaN	5593	2913	8506
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8509	24.342	NaN	4962.8	30	0	449.37	0.106	+			38129	SPYGGGHAL	9	63	429.7090367948716	857.4035206565433	2	429.70867919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SPYGGGHAL_	ENSG00000187634|ENST00000616016|SAMD11;nc|ENSG00000187634|Q96NU1-1|SAMD11;nc|ENSG00000187634|Q96NU1-2|SAMD11;nc|ENSG00000187634|Q96NU1-4|SAMD11;nc|ENSG00000187634|Q96NU1-5|SAMD11;nc|ENSG00000187634|Q96NU1-6|SAMD11;nc|ENSG00000187634|Q96NU1|SAMD11	57.81127852772723	0.2318599694398087	4				NaN	NaN	0	NaN	5594	2913	8506
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8510	24.344	NaN	1342.9	30	0	148.97	0.106	+			16557	HEYVDQPKM	9	50	573.7660151699267	1145.5174774066534	2	573.7667236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HEYVDQPKM_	ENSG00000092421|ENST00000343348|SEMA6A;nc|ENSG00000092421|Q9H2E6-2|SEMA6A;SEMA6A|p.K1013Nfs*11|1|0.19|ENSG00000092421|chr5:116446670-116446670|G/-|frameshift_variant;SEMA6A|p.K1013Qfs*15|1|0.45|ENSG00000092421|chr5:116446669-116446670|-/G|frameshift_variant;SEMA6A|p.N990Mfs*8|1|0.1|ENSG00000092421|chr5:116446737-116446738|-/GTACA|frameshift_variant;SEMA6A|p.R918Efs*23|1|0.25|ENSG00000092421|chr5:116446955-116446956|-/T|frameshift_variant;SEMA6A|p.V881Ffs*20|2|0.21|ENSG00000092421|chr5:116447069-116447069|G/-|frameshift_variant	93.1432384553994	0.056003526918089595	4				NaN	NaN	0	NaN	5595	2913	8506
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8511	24.346	NaN	4261.6	30	0	2757.6	0.106				-1	AICHTLRYN	9	37	383.1938948705865	1146.5598552119595	3	383.1940002441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_AIC(Carbamidomethyl (C))HTLRYN_	OR10H1|p.P129T|1|0.36|ENSG00000186723|chr19:15807653-15807653|G/T|missense_variant	25.57405402267927	0.5642445186134241	4				NaN	NaN	0	NaN	5596	2913	8506
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8512	24.348	NaN	2351.8	30	0	1126.8	0.032			+	43940	TPASKGFT	8	46	404.7137551869326	807.4129574406652	2	404.7137756347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TPASKGFT_	REV__ENST00000518197.1_1_8:21768344-21771136:-|nuORF	25.57405402267927	0.7618694492699909	4				NaN	NaN	0	NaN	5597	2913	8506
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8513	24.348	NaN	1234.5	30	0	124.25	0.14	+			2258	ALVAYLVLF	9	61	504.8081970214844	NaN	0	504.8081970214844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ALVAYLVLF_	ENSG00000121281|ENST00000673801|ADCY7	39.021493756699265	0.2805557132942146	4				NaN	NaN	0	NaN	5598	2913	8506
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8531	24.387	NaN	6669.5	30	0	645.09	0.214	+			16068	HAYLSKNSL	9	68	516.7770995886771	1031.539646244154	2	516.777587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HAYLSKNSL_	ENSG00000131236|ENST00000372805|CAP1;ENST00000417455.1_1_10:44100293-44100833:-|nuORF;ENST00000461993.1_1_1:40535258-40537202:+|nuORF;ENST00000476047.1_1_3:76483919-76484456:+|nuORF;ENST00000494114.1_1_1:40536414-40537202:+|nuORF;nc|ENSG00000131236|Q01518-2|CAP1	120.8684288430529	0.02067403653475984	4				NaN	NaN	0	NaN	5613	2916	8530
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8532	24.39	NaN	12866	30	0	4750	0.106	+			39368	STCSPIISK	9	67	468.2465730762778	934.4785932193556	2	468.2467346191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STCSPIISK_	ENSG00000170606|ENST00000304858|HSPA4;ENST00000514825.1_1_5:132437411-132440125:+|nuORF	117.81106730687013	0.02252488733980868	4				NaN	NaN	0	NaN	5614	2916	8530
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8533	24.392	NaN	7876.7	30	0	1128.5	0.106	+			19855	KEEIVHQL	8	66	498.2795078742787	994.5444628153574	2	498.279541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEEIVHQL_	ENSG00000085231|ENST00000380822|AK6;nc|ENSG00000085231|Q9Y3D8-2|AK6	113.41158876095287	0.24327961457765637	4				NaN	NaN	0	NaN	5615	2916	8530
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8534	24.394	NaN	8326.2	30	0	737.52	0.106			+	33075	REKLELTE	8	68	509.2823398831772	1016.5501268331544	2	509.2828369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_REKLELTE_	REV__ENSG00000160994|ENST00000292574|CCDC105	52.936696900407355	0.5717071646657654	4				NaN	NaN	0	NaN	5616	2916	8530
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8535	24.396	NaN	4814.1	30	0	1178.2	0.106	+			13143	GGMSIFLKK	9	48	332.8561831779811	995.5467201341434	3	332.8563232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_GGM(Oxidation (M))SIFLKK_	ENST00000264995.7_1_3:131220431-131221595:-|nuORF	45.97224482568171	0.3502073465782774	4				NaN	NaN	0	NaN	5617	2916	8530
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8536	24.398	NaN	3797.1	30	0	582.41	0.033	+			11736	FSGKSTEL	8	59	434.72436900449316	867.4341850757863	2	434.7240905761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FSGKSTEL_	ENSG00000167900|ENST00000301634|TK1	54.776311868738084	0.5534952410049249	4				NaN	NaN	0	NaN	5618	2916	8530
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8537	24.398	NaN	3346	30	0	732.36	0.14	+			33661	RNELQTVY	8	56	511.76683794190507	1021.5191229506102	2	511.76739501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RNELQTVY_	ENSG00000129422|ENST00000693296|MTUS1;ENST00000517413.5_1_8:17512046-17533895:-|nuORF;nc|ENSG00000129422|Q9ULD2-2|MTUS1;nc|ENSG00000129422|Q9ULD2-3|MTUS1;nc|ENSG00000129422|Q9ULD2-4|MTUS1;nc|ENSG00000129422|Q9ULD2-6|MTUS1;nc|ENSG00000129422|Q9ULD2-7|MTUS1	42.47446043378293	0.6409579893742323	4				NaN	NaN	0	NaN	5619	2916	8530
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8556	24.438	NaN	6421.2	30	0	2099.8	0.214	+			49106	VVLGSGGVGK	10	54	436.76362221358374	871.5126914939675	2	436.7634582519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVLGSGGVGK_	ENSG00000116473|ENST00000369709|RAP1A;ENSG00000123728|ENST00000370874|RAP2C;ENSG00000125249|ENST00000245304|RAP2A;ENSG00000127314|ENST00000250559|RAP1B;ENSG00000181467|ENST00000323534|RAP2B;ENST00000460800.5_1_12:69042504-69044290:+|nuORF;ENST00000494982.1_1_1:112233982-112249293:+|nuORF;ENST00000501412.2_1_12:69042504-69042582:+|nuORF;ENST00000535492.5_2_12:69042504-69047907:+|nuORF;nc|ENSG00000127314|P61224-2|RAP1B;nc|ENSG00000127314|P61224-3|RAP1B;nc|ENSG00000127314|P61224-4|RAP1B;RAP2B|p.F39Lfs*6|1|0.34|ENSG00000181467|chr3:153162808-153162809|TT/-|frameshift_variant	85.16082228582465	0.15877915086237185	4				NaN	NaN	0	NaN	5635	2919	8555
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8557	24.441	NaN	5561.6	30	0	1220.5	0.106			+	43717	TKSFKEPA	8	63	454.2476969548308	906.4808409764616	2	454.2475891113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TKSFKEPA_	REV__ENSG00000010219|ENST00000543431|DYRK4;REV__ENST00000536157.5_1_12:4699579-4705470:+|nuORF;REV__nc|ENSG00000010219|Q9NR20-2|DYRK4;REV__nc|ENSG00000010219|Q9NR20-3|DYRK4;REV__nc|ENSG00000010219|Q9NR20-4|DYRK4;REV__nc|ENSG00000010219|Q9NR20-5|DYRK4;REV__nc|ENSG00000010219|Q9NR20|DYRK4	58.78195531508484	0.5138399468736706	4				NaN	NaN	0	NaN	5636	2919	8555
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8558	24.443	NaN	2448.1	30	0	416.71	0.106	+			22821	KVFTVSNIK	9	65	518.3133668921835	1034.6121808511668	2	518.3138427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KVFTVSNIK_	ENSG00000185518|ENST00000394232|SV2B;nc|ENSG00000185518|Q7L1I2-2|SV2B;SV2B|p.E332D|1|0.22|ENSG00000185518|chr15:91260397-91260397|G/T|missense_variant;SV2B|p.G586Wfs*4|2|0.27|ENSG00000185518|chr15:91289561-91289562|-/T|frameshift_variant	42.86426827375447	0.38666266728046506	4				NaN	NaN	0	NaN	5637	2919	8555
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8559	24.445	NaN	3236.1	30	0	670.8	0.106			+	7503	DGKVPIPK	8	55	427.2608545738696	852.5071562145392	2	427.2604675292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DGKVPIPK_	REV__ENSG00000095015|ENST00000399503|MAP3K1	60.97194046774394	0.49215940876911696	4				NaN	NaN	0	NaN	5638	2919	8555
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8560	24.447	NaN	1293.1	30	0	172.78	0.106	+			38096	SPVENKEVY	9	54	532.766340141985	1063.5181273507699	2	532.7671508789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SPVENKEVY_	ENSG00000173276|ENST00000310826|ZBTB21	45.97224482568171	0.3502073465782774	4				NaN	NaN	0	NaN	5639	2919	8555
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8561	24.449	NaN	2690.9	30	0	754.27	0.039	+			48332	VTGFPEPTLTW	11	43	416.5485175409547	1246.6237232230642	3	416.5486755371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTGFPEPTLTW_	ENSG00000163492|ENST00000443758|CCDC141;ENST00000480419.1_1_2:179698902-179710451:-|nuORF;nc|ENSG00000163492|Q6ZP82-1|CCDC141	30.568863376406313	0.6691487505135859	4				NaN	NaN	0	NaN	5640	2919	8555
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8562	24.449	NaN	1860.7	30	0	319.38	0.142				-1	MEPPAPLSTSS	11	44	378.17822678964177	1131.5128509691253	3	378.1783447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_M(Oxidation (M))EPPAPLSTSS_	ENSG00000164877|ENST00000297508|MICALL2;ENST00000472100.5_1_7:1481822-1498962:-|nuORF;MICALL2|p.P533Rfs*36|1|0.4|ENSG00000164877|chr7:1442305-1442305|G/-|frameshift_variant;nc|ENSG00000164877|Q8IY33-2|MICALL2;nc|ENSG00000164877|Q8IY33-4|MICALL2;nc|ENSG00000164877|Q8IY33-5|MICALL2	24.231819034082204	0.7356191775841856	4				NaN	NaN	0	NaN	5641	2919	8555
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8576	24.487	NaN	8029.5	30	0	1339.7	0.214	+			39186	SSYREAVFK	9	65	543.7824163392072	1085.5502797452143	2	543.7830810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSYREAVFK_	ENSG00000138629|ENST00000395081|UBL7	80.45461616416974	0.09558281504443908	4				NaN	NaN	0	NaN	5652	2922	8575
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8577	24.491	NaN	21853	30	0	9342.3	0.106	+			8078	DVREEGKENAF	11	68	431.8739032774718	1292.5998804326155	3	431.8736877441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DVREEGKENAF_	ENSG00000109111|ENST00000314616|SUPT6H;nc|ENSG00000109111|Q7KZ85-2|SUPT6H	54.343338949951054	0.37394860514808087	4				NaN	NaN	0	NaN	5653	2922	8575
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8578	24.493	NaN	5028.3	30	0	1086.1	0.106	+			36857	SIFKQPVTK	9	67	524.3131037292209	1046.6116545252416	2	524.3140869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SIFKQPVTK_	ENSG00000071655|ENST00000434436|MBD3;ENSG00000134046|ENST00000256429|MBD2;ENST00000590830.5_1_19:1578341-1584901:-|nuORF;nc|ENSG00000071655|O95983-2|MBD3	112.10723106719422	0.02684780151337622	4				NaN	NaN	0	NaN	5654	2922	8575
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8579	24.495	NaN	3231.5	30	0	323.6	0.106	+			20501	KFEDAKLAA	9	64	496.77392891541547	991.533304897631	2	496.77410888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KFEDAKLAA_	ENSG00000153113|ENST00000675179|CAST;nc|ENSG00000153113|P20810-10|CAST;nc|ENSG00000153113|P20810-2|CAST;nc|ENSG00000153113|P20810-3|CAST;nc|ENSG00000153113|P20810-4|CAST;nc|ENSG00000153113|P20810-5|CAST;nc|ENSG00000153113|P20810-7|CAST;nc|ENSG00000153113|P20810-8|CAST;nc|ENSG00000153113|P20810-9|CAST;nc|ENSG00000153113|P20810|CAST	93.1432384553994	0.056003526918089595	4				NaN	NaN	0	NaN	5655	2922	8575
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8580	24.496	NaN	2387	30	0	463.92	0.106	+			38471	SSASILESK	9	57	461.2478777104104	920.4812024876209	2	461.2479553222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSASILESK_	ENSG00000136628|ENST00000366923|EPRS1	112.10723106719422	0.02684780151337622	4				NaN	NaN	0	NaN	5656	2922	8575
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8581	24.498	NaN	4020.6	30	0	497.41	0.035			+	6782	CFHITVFVA	9	63	518.7674020499907	1035.5202511667812	2	518.76806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_CFHITVFVA_	REV__nc|ENSG00000214447|A6NFU0|FAM187A	33.51558372728122	0.4900267029546261	4				NaN	NaN	0	NaN	5657	2922	8575
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8582	24.499	NaN	2407	30	0	262.96	0.14			+	37422	SLGPLPTNAGP	11	59	512.2769713975005	1022.5393898618009	2	512.2772827148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SLGPLPTNAGP_	REV__ENSG00000109118|ENST00000332830|PHF12;REV__ENST00000582436.5_1_17:27237055-27251401:-|nuORF;REV__ENST00000582655.5_1_17:27237828-27251299:-|nuORF;REV__nc|ENSG00000109118|Q96QT6-2|PHF12;REV__nc|ENSG00000109118|Q96QT6-3|PHF12;REV__nc|ENSG00000109118|Q96QT6-4|PHF12;REV__nc|ENSG00000109118|Q96QT6-5|PHF12;REV__PHF12|p.P882Qfs*30|1|0.22|ENSG00000109118|chr17:28906891-28906891|G/-|frameshift_variant	41.42661286455405	0.5384226294179143	4				NaN	NaN	0	NaN	5658	2922	8575
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8600	24.539	NaN	31473	30	0	3920.1	0.214	+			42629	TAVEAGRAL	9	66	444.25062307830024	886.4866932234005	2	444.25054931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAVEAGRAL_	ENSG00000032444|ENST00000600737|PNPLA6;nc|ENSG00000032444|Q8IY17-2|PNPLA6;nc|ENSG00000032444|Q8IY17-3|PNPLA6;nc|ENSG00000032444|Q8IY17-5|PNPLA6;nc|ENSG00000032444|Q8IY17|PNPLA6;PNPLA6|p.S1175Pfs*10|1|0.55|ENSG00000032444|chr19:7558944-7558944|G/-|frameshift_variant	109.47833844074708	0.029530294723441826	4				NaN	NaN	0	NaN	5673	2925	8599
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8601	24.542	NaN	31934	30	0	2863.4	0.106	+			16280	HEGKSFQL	8	91	473.24279657828146	944.4710402233629	2	473.24267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HEGKSFQL_	ENSG00000107551|ENST00000340258|RASSF4;ENST00000462822.1_1_10:45465650-45477981:+|nuORF;ENST00000489171.5_1_10:45466954-45488774:+|nuORF;nc|ENSG00000107551|Q9H2L5-4|RASSF4	54.776311868738084	0.5534952410049249	4				NaN	NaN	0	NaN	5674	2925	8599
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8602	24.544	NaN	42729	30	0	14300	0.106	+			4567	ATLEETLVKKK	11	82	420.59030820467575	1258.7490952142273	3	420.5903015136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATLEETLVKKK_	ENSG00000254093|ENST00000314787|PINX1	94.4091291819064	0.0807249280027251	4				NaN	NaN	0	NaN	5675	2925	8599
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8603	24.546	NaN	15758	30	0	4181.4	0.106	+			39950	STMGYMMAK	9	68	518.218012800423	1034.421472667646	2	518.218994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_STM(Oxidation (M))GYMMAK_	ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;ENST00000518337.1_1_8:74128289-74128592:-|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P	134.81075121484326	0.012914550297035062	4				NaN	NaN	0	NaN	5676	2925	8599
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8604	24.548	NaN	9315.8	30	0	637.33	0.106	+			22937	KVQEMNYIQK	10	74	427.5604290560148	1279.6594577682445	3	427.5601501464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KVQEMNYIQK_	ENSG00000068366|ENST00000672401|ACSL4;nc|ENSG00000068366|O60488|ACSL4	76.16968421966216	0.22691431239609447	4				NaN	NaN	0	NaN	5677	2925	8599
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8605	24.55	NaN	40023	30	0	25736	0.03				-1	 	0	58	322.19345447342715	642.3723560136543	2	322.19342041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5678	2925	8599
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8606	24.55	NaN	1722.1	30	0	323.92	0.143	+			48478	VTLVFSEMGIS	11	44	394.87439760534954	1181.6013634162487	3	395.2148742675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VTLVFSEMGIS_	ENST00000470258.5_1_13:39623408-39623585:+|nuORF	29.550750289552195	0.6798279264880025	4				NaN	NaN	0	NaN	5679	2925	8599
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8623	24.586	NaN	13461	30	0	3781.4	0.214	+			40878	SVFHASLAK	9	69	480.26878809529705	958.5230232573941	2	480.2687072753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVFHASLAK_	ENSG00000064651|ENST00000262461|SLC12A2;nc|ENSG00000064651|P55011-3|SLC12A2;SLC12A2|p.E1119Rfs*7|1|0.47|ENSG00000064651|chr5:128184417-128184418|-/A|frameshift_variant;SLC12A2|p.P1171Sfs*18|1|0.38|ENSG00000064651|chr5:128186498-128186499|-/TC|frameshift_variant	132.757866228626	0.013877640931359021	4				NaN	NaN	0	NaN	5693	2928	8622
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8624	24.59	NaN	12077	30	0	5152.9	0.106	+			40131	STQDTLLIKK	10	62	382.8957177686427	1145.6653239061282	3	382.8957214355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STQDTLLIKK_	ENSG00000101825|ENST00000217939|MXRA5;MXRA5|p.Q2683Kfs*44|1|0.34|ENSG00000101825|chrX:3310156-3310156|G/-|frameshift_variant	48.601550744091256	0.46988609897316763	4				NaN	NaN	0	NaN	5694	2928	8622
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8625	24.592	NaN	2218.8	30	0	311.68	0.106			+	31673	QNIHIHLQ	8	56	501.7769446792079	NaN	0	501.7774963378906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QNIHIHLQ_	REV__ENST00000377403.6_1_1:9324934-9325291:+|nuORF	57.81127852772723	1.7418937515398478	4				NaN	NaN	0	NaN	5695	2928	8622
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8626	24.594	NaN	52415	30	0	11768	0.106	+			40037	STMVDVRVMKK	11	81	431.90515387268493	1292.6936322182548	3	431.9053649902344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STMVDVRVMKK_	ENSG00000085224|ENST00000373344|ATRX;nc|ENSG00000085224|P46100-2|ATRX;nc|ENSG00000085224|P46100-3|ATRX;nc|ENSG00000085224|P46100-4|ATRX;nc|ENSG00000085224|P46100-5|ATRX	92.23892857375223	0.08960911027004287	4				NaN	NaN	0	NaN	5696	2928	8622
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8627	24.596	NaN	2680.8	30	0	340.6	0.106	+			35793	SEAIKGAVVG	10	63	465.76597809392905	NaN	0	465.765869140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SEAIKGAVVG_	ENSG00000113013|ENST00000297185|HSPA9;ENST00000506477.5_1_5:137906647-137911007:-|nuORF	64.20726635412375	0.1999210135493042	4				NaN	NaN	0	NaN	5697	2928	8622
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8628	24.598	NaN	1397.1	30	0	393.16	0.036	+			14795	GTLDIRLKK	9	28	348.557201040763	NaN	0	348.5571594238281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTLDIRLKK_	ENSG00000124831|ENST00000308482|LRRFIP1;ENST00000483443.1_1_2:238664770-238678725:+|nuORF	19.359975847455235	0.3714571876404798	4				NaN	NaN	0	NaN	5698	2928	8622
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8629	24.598	NaN	2970.9	30	0	466.12	0.138	+			36169	SELEMAKA	8	60	439.7177154275435	NaN	0	439.24371337890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SELEMAKA_	ENSG00000267796|ENST00000301159|LIN37	71.87747018426188	1.7418937515398478	4				NaN	NaN	0	NaN	5699	2928	8622
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8647	24.638	NaN	9875.8	30	0	1678.9	0.214	+			3581	ASVETGFAK	9	72	455.23720880501537	908.4598646768308	2	455.2370300292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASVETGFAK_	ENSG00000042286|ENST00000307864|AIFM2;nc|ENSG00000042286|Q9BRQ8-2|AIFM2	120.8684288430529	0.02067403653475984	4				NaN	NaN	0	NaN	5714	2931	8646
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8648	24.642	NaN	4500.5	30	0	506.96	0.106	+			36108	SEKLGGAEV	9	72	445.2346051658242	888.4546573984484	2	445.23468017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEKLGGAEV_	ENSG00000145192|ENST00000411641|AHSG	85.86182877749512	0.07653218437724067	4				NaN	NaN	0	NaN	5715	2931	8646
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8649	24.644	NaN	8118.7	30	0	2025.2	0.106	+			12385	GDYERAVR	8	66	483.2442652162105	964.4739774992211	2	483.24407958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GDYERAVR_	ENSG00000090530|ENST00000319332|P3H2;P3H2|p.V176Rfs*3|1|0.25|ENSG00000090530|chr3:189995398-189995399|-/A|frameshift_variant	44.116797842482775	0.6307669463330267	4				NaN	NaN	0	NaN	5716	2931	8646
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8650	24.645	NaN	1387.6	30	0	186.97	0.106			+	34132	RSTIATDLAP	10	54	522.7875449914034	1043.5605370496066	2	522.7877807617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RSTIATDLAP_	REV__ENSG00000146216|ENST00000259750|TTBK1	35.15202426646627	0.5927656479315102	4				NaN	NaN	0	NaN	5717	2931	8646
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8651	24.647	NaN	1867.3	30	0	508.81	0.106	+			28899	NQLETAPPH	9	56	503.7528178542297	1005.4910827752594	2	503.7528076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NQLETAPPH_	ENSG00000162402|ENST00000294383|USP24	35.61828744233558	0.47037581924408073	4				NaN	NaN	0	NaN	5718	2931	8646
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8652	24.649	NaN	946.74	30	0	119.28	0.037			+	19920	KEFEELKKS	9	46	569.311279296875	NaN	0	569.311279296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KEFEELKKS_	REV__ENSG00000269964|ENST00000684080|MEI4	41.080066990542036	0.2681650218997241	4				NaN	NaN	0	NaN	5719	2931	8646
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8653	24.65	NaN	15040	30	0	6829.5	0.145	+			20861	KIMKDILEK	9	81	373.22617717107596	1116.6567021134279	3	373.2262268066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KIMKDILEK_	ENSG00000080824|ENST00000216281|HSP90AA1;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1	96.0336014099291	0.047854655524928534	4				NaN	NaN	0	NaN	5720	2931	8646
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8670	24.688	NaN	27771	30	0	2469.5	0.215	+			43924	TPAGVVNKY	9	97	474.76057183619207	947.5065907391842	2	474.76055908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TPAGVVNKY_	ENSG00000172893|ENST00000355527|DHCR7	166.67852932204877	0.003333876602083393	4				NaN	NaN	0	NaN	5734	2934	8669
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8671	24.691	NaN	15505	30	0	2002.9	0.106	+			11649	FQHVGKAF	8	74	467.2502291280775	NaN	0	467.25018310546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FQHVGKAF_	ENSG00000254772|ENST00000329251|EEF1G;ENST00000526409.5_1_11:62327153-62342310:-|nuORF;nc|ENSG00000254772|P26641-2|EEF1G;NCEH1-EEF1G|1|fusion	102.7733458925114	1.7418937515398478	4				NaN	NaN	0	NaN	5735	2934	8669
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8672	24.693	NaN	18467	30	0	3984.5	0.106	+			46287	VEIAKQSV	8	65	437.255508194656	872.496463456112	2	437.2552185058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VEIAKQSV_	ENSG00000113558|ENST00000353411|SKP1;ENST00000506450.1_1_4:25624416-25624897:+|nuORF;nc|ENSG00000113558|P63208-2|SKP1	132.757866228626	0.23138309008778796	4				NaN	NaN	0	NaN	5736	2934	8669
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8673	24.695	NaN	3690.1	30	0	426.83	0.106	+			40787	SVDPVSVNR	9	63	486.75817342502825	971.5017939168565	2	486.7585144042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVDPVSVNR_	ENSG00000143437|ENST00000358595|ARNT;ENST00000468970.1_1_1:150804279-150808966:-|nuORF;nc|ENSG00000143437|P27540-2|ARNT;nc|ENSG00000143437|P27540-3|ARNT;nc|ENSG00000143437|P27540-4|ARNT	82.7504851949679	0.08565546331141553	4				NaN	NaN	0	NaN	5737	2934	8669
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8674	24.697	NaN	3429.3	30	0	1763.2	0.106			+	-1	VSLKSMDTL	9	40	505.26425604755997	1008.51395916192	2	505.26373291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_VSLKSM(Oxidation (M))DTL_	REV__ENST00000393389.7_1_11:82924119-82924311:+|nuORF	27.882242232435846	0.5426732730940306	4				NaN	NaN	0	NaN	5738	2934	8669
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8675	24.699	NaN	3424.5	30	0	678.74	0.034	+			3403	ASQEQPAQP	9	63	478.22857009373945	954.4425872542789	2	478.22802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASQEQPAQP_	CHD8|p.D1870Rfs*3|1|0.3|ENSG00000100888|chr14:21394187-21394188|-/G|frameshift_variant;CHD8|p.I1108Nfs*7|1|0.24|ENSG00000100888|chr14:21403648-21403649|-/T|frameshift_variant;CHD8|p.I351Nfs*70|1|0.25|ENSG00000100888|chr14:21429127-21429128|-/T|frameshift_variant;CHD8|p.L1905Ffs*30|2|0.29|ENSG00000100888|chr14:21394082-21394082|G/-|frameshift_variant;CHD8|p.N2371Ifs*6|1|0.32|ENSG00000100888|chr14:21391017-21391017|T/-|frameshift_variant;CHD8|p.N2371Kfs*2|2|0.24|ENSG00000100888|chr14:21391016-21391017|-/T|frameshift_variant;CHD8|p.V1538*|1|0.4|ENSG00000100888|chr14:21400267-21400267|T/-|frameshift_variant;ENSG00000100888|ENST00000646647|CHD8	39.252832667884924	0.4290233611298554	4				NaN	NaN	0	NaN	5739	2934	8669
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8676	24.699	NaN	3722.7	30	0	341.35	0.139			+	24001	LEAQSKEL	8	61	459.2501270930785	NaN	0	459.2500915527344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LEAQSKEL_	REV__BAIAP2L1|p.A287Lfs*11|2|0.27|ENSG00000006453|chr7:98310542-98310542|G/-|frameshift_variant;REV__BAIAP2L1|p.F462Lfs*34|1|0.21|ENSG00000006453|chr7:98304232-98304232|A/-|frameshift_variant;REV__BAIAP2L1|p.P436Hfs*60|4|0.39|ENSG00000006453|chr7:98304311-98304311|G/-|frameshift_variant;REV__ENSG00000006453|ENST00000005260|BAIAP2L1;REV__ENST00000462558.5_1_7:97937677-98030347:-|nuORF;REV__LMTK2-BAIAP2L1|1|fusion	35.61828744233558	1.7418937515398478	4				NaN	NaN	0	NaN	5740	2934	8669
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8694	24.739	NaN	4201.1	30	0	514.7	0.215	+			32025	QRNCLTVLG	9	60	502.2711005069031	1002.5276480806062	2	502.27105712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QRNCLTVLG_	LRRC70|p.R167C|1|0.3|ENSG00000186105|chr5:62579937-62579937|C/T|missense_variant	54.776311868738084	0.25715957988447635	4				NaN	NaN	0	NaN	5755	2937	8693
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8695	24.743	NaN	18543	30	0	1512.6	0.106	+			34826	RYLSKATTL	9	90	526.8085036063995	1051.602454279599	2	526.808837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RYLSKATTL_	ENSG00000130177|ENST00000356221|CDC16;nc|ENSG00000130177|Q13042-2|CDC16;nc|ENSG00000130177|Q13042-3|CDC16;nc|ENSG00000130177|Q13042-4|CDC16	114.85826248499774	0.024312442104607014	4				NaN	NaN	0	NaN	5756	2937	8693
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8696	24.745	NaN	3142.1	30	0	351.05	0.106	+			33350	RHGQLAEAG	9	56	469.7452621695473	NaN	0	469.7455139160156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RHGQLAEAG_	ENSG00000103657|ENST00000443617|HERC1	49.44154591367651	0.21054156626303966	4				NaN	NaN	0	NaN	5757	2937	8693
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8697	24.747	NaN	5033.9	30	0	562.11	0.106	+			25314	LPAQQVHNY	9	66	535.2746149339682	1068.5346769347364	2	535.2752685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LPAQQVHNY_	ENSG00000137265|ENST00000380956|IRF4;ENST00000495137.5_1_6:394829-397293:+|nuORF	90.77665401227738	0.06267569666681755	4				NaN	NaN	0	NaN	5758	2937	8693
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8698	24.748	NaN	2557.8	30	0	243.36	0.106			+	-1	LSAMGPLLV	9	63	458.7639535984061	915.5133542636122	2	458.7636413574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_LSAM(Oxidation (M))GPLLV_	REV__ENSG00000174628|ENST00000695302|IQCK;REV__ENST00000564515.5_1_16:19729628-19746934:+|nuORF;REV__ENST00000568126.5_1_16:19729746-19775223:+|nuORF;REV__nc|ENSG00000174628|Q8N0W5-2|IQCK;REV__nc|ENSG00000174628|Q8N0W5-3|IQCK	47.91560031466742	0.327412564698279	4				NaN	NaN	0	NaN	5759	2937	8693
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8699	24.75	NaN	2354	30	0	386.41	0.035	+			8309	EAISKAEAY	9	62	491.24816844470496	NaN	0	491.2476501464844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EAISKAEAY_	ENSG00000170011|ENST00000302541|MYRIP;nc|ENSG00000170011|Q8NFW9-2|MYRIP;nc|ENSG00000170011|Q8NFW9-3|MYRIP;nc|ENSG00000170011|Q8NFW9-4|MYRIP;nc|ENSG00000170011|Q8NFW9-5|MYRIP;nc|ENSG00000170011|Q8NFW9-6|MYRIP	93.19546047674547	0.03515475374905802	4				NaN	NaN	0	NaN	5760	2937	8693
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8700	24.751	NaN	2528.8	30	0	838.8	0.144			+	40137	STQGKHCGKCV	11	33	383.18171584421566	NaN	0	383.1816711425781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STQGKHCGKCV_	REV__ENST00000558830.5_1_15:79165359-79172915:+|nuORF	37.50817390946774	0.39825797133360086	4				NaN	NaN	0	NaN	5761	2937	8693
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8717	24.788	NaN	14673	30	0	4815.8	0.215	+			48164	VSYVEVVKK	9	62	350.8778426693416	1049.6116986082247	3	350.8778991699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSYVEVVKK_	ENSG00000154556|ENST00000695409|SORBS2;nc|ENSG00000154556|O94875-10|SORBS2;nc|ENSG00000154556|O94875-11|SORBS2;nc|ENSG00000154556|O94875-12|SORBS2;nc|ENSG00000154556|O94875-2|SORBS2;nc|ENSG00000154556|O94875-3|SORBS2;nc|ENSG00000154556|O94875-4|SORBS2;nc|ENSG00000154556|O94875-5|SORBS2;nc|ENSG00000154556|O94875-7|SORBS2;nc|ENSG00000154556|O94875-8|SORBS2;nc|ENSG00000154556|O94875-9|SORBS2;nc|ENSG00000154556|O94875|SORBS2	70.8162118820467	0.13725933411854815	4				NaN	NaN	0	NaN	5775	2940	8716
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8718	24.791	NaN	1781.1	30	0	191.32	0.106	+			34940	SAAKEFFTK	9	56	514.774070928423	1027.533588923646	2	514.7745361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAAKEFFTK_	ENSG00000135597|ENST00000450536|REPS1;nc|ENSG00000135597|Q96D71-2|REPS1;nc|ENSG00000135597|Q96D71-3|REPS1;nc|ENSG00000135597|Q96D71-4|REPS1;REPS1|p.F519Yfs*3|1|0.21|ENSG00000135597|chr6:138917599-138917600|AA/-|frameshift_variant;REPS1|p.P550Lfs*14|1|0.22|ENSG00000135597|chr6:138915929-138915929|G/-|frameshift_variant	84.81729255234993	0.07947707105691067	4				NaN	NaN	0	NaN	5776	2940	8716
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8719	24.793	NaN	5177	30	0	1580.1	0.106			+	45006	TVERAKSHL	9	68	520.7959604910407	1039.5773680488812	2	520.7965698242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVERAKSHL_	REV__ENST00000202028.9_1_20:34817763-34817889:+|nuORF	56.72105179125745	0.24094814563026265	4				NaN	NaN	0	NaN	5777	2940	8716
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8720	24.795	NaN	11297	30	0	3514.8	0.106	+			48522	VTNNVIRLK	9	52	352.8888578608985	1055.6447441828955	3	352.888916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTNNVIRLK_	ENSG00000095319|ENST00000372577|NUP188;ENST00000477069.5_1_9:131747266-131765892:+|nuORF;nc|ENSG00000095319|Q5SRE5-2|NUP188;NUP188|p.L837Wfs*19|1|0.15|ENSG00000095319|chr9:128988157-128988157|C/-|frameshift_variant	54.722347961057174	0.257609425301511	4				NaN	NaN	0	NaN	5778	2940	8716
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8721	24.797	NaN	1658.1	30	0	676.04	0.106				-1	HVLGALCSL	9	48	485.2626775337169	968.5108021342338	2	485.2626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_HVLGALC(Carbamidomethyl (C))SL_	ENSG00000133265|ENST00000433386|HSPBP1;nc|ENSG00000133265|Q9NZL4-3|HSPBP1	33.51558372728122	0.4900267029546261	4				NaN	NaN	0	NaN	5779	2940	8716
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8722	24.799	NaN	1491.4	30	0	321.85	0.035			+	30016	PPLPCVGAAPV	11	47	510.7825262380505	1019.550499542901	2	510.7829895019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PPLPCVGAAPV_	REV__ENST00000308027.6_1_17:6941606-6941711:+|nuORF	24.20275056022122	0.7359240821686345	4				NaN	NaN	0	NaN	5780	2940	8716
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8723	24.799	NaN	1502.4	30	0	231.5	0.14			+	19692	KDRFRLVA	8	52	502.8027229758641	1003.5908930185283	2	502.8030090332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KDRFRLVA_	REV__ENST00000460508.3_1_2:74730137-74730440:-|nuORF	51.19269402634007	0.5868595481438337	4				NaN	NaN	0	NaN	5781	2940	8716
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8740	24.836	NaN	10612	30	0	3072.7	0.214	+			2123	ALHVPRGL	8	53	431.7665041119544	861.5184552907089	2	431.7665100097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ALHVPRGL_	nc|ENSG00000187848|Q9UBL9-7|P2RX2	37.028477286268924	0.6747514403204248	4				NaN	NaN	0	NaN	5795	2943	8739
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8741	24.84	NaN	5328.3	30	0	3548.9	0.106	+			17481	ICTAIALFQT	10	45	540.7932897251667	1079.5720265171333	2	540.7940063476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ICTAIALFQT_	ENSG00000158292|ENST00000377893|GPR153;GPR153|p.P336Rfs*20|1|0.28|ENSG00000158292|chr1:6250597-6250597|G/-|frameshift_variant	45.97224482568171	0.49411383603842696	4				NaN	NaN	0	NaN	5796	2943	8739
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8742	24.842	NaN	7526.7	30	0	1355.6	0.106	+			11853	FTAPSTVGK	9	56	454.2476280164257	906.4807030996515	2	454.2477111816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FTAPSTVGK_	ENSG00000140694|ENST00000437198|PARN;nc|ENSG00000140694|O95453-2|PARN;nc|ENSG00000140694|O95453-3|PARN;nc|ENSG00000140694|O95453-4|PARN	69.6276240434122	0.14239879520340665	4				NaN	NaN	0	NaN	5797	2943	8739
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8743	24.844	NaN	7689.9	30	0	670.2	0.106	+			23669	LASKEIHQF	9	69	536.7929145819951	1071.57127623079	2	536.7935180664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LASKEIHQF_	ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1	72.87924865735499	0.12833875048249987	4				NaN	NaN	0	NaN	5798	2943	8739
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8744	24.846	NaN	4252.8	30	0	1785	0.106	+			31014	QESTKQLTM	9	58	533.265494396628	1064.516435860056	2	533.2667236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QESTKQLTM_	ENSG00000124422|ENST00000261497|USP22;ENSG00000247746|ENST00000500968|USP51;ENSG00000273820|ENST00000621775|USP27X;ENST00000478443.1_1_17:20910195-20914666:-|nuORF;nc|ENSG00000124422|Q9UPT9-2|USP22;USP27X|p.N300D|1|0.79|ENSG00000273820|chrX:49881205-49881205|A/G|missense_variant	70.8162118820467	0.13725933411854815	4				NaN	NaN	0	NaN	5799	2943	8739
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8745	24.847	NaN	5962.5	30	0	3520.3	0.035			+	-1	KICLAKASL	9	41	335.20375122260305	1002.5894242680092	3	335.20379638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_KIC(Carbamidomethyl (C))LAKASL_	REV__tr|U7T2I2|U7T2I2_FUSNURibonuclease3OS=FusobacteriumnucleatumCTI-5OX=1316586GN=rncPE=3SV=1	39.252832667884924	0.4290233611298554	4				NaN	NaN	0	NaN	5800	2943	8739
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8763	24.883	NaN	5530	30	0	839.87	0.214	+			23846	LDAKLRVTK	9	72	522.3321241298826	1042.649695326565	2	522.3325805664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LDAKLRVTK_	CCDC186|p.N867Ifs*4|1|0.18|ENSG00000165813|chr10:114125899-114125899|T/-|frameshift_variant;ENSG00000165813|ENST00000369287|CCDC186	82.24051045832904	0.08786059719216216	4				NaN	NaN	0	NaN	5815	2946	8762
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8764	24.887	NaN	3600.9	30	0	462.25	0.106	+			16482	HETRLVEV	8	69	491.76949867073813	981.5244444082763	2	491.7691955566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HETRLVEV_	ENSG00000113368|ENST00000261366|LMNB1;ENST00000504788.5_1_5:126112928-126171953:+|nuORF	63.53385203322761	0.46679685265839455	4				NaN	NaN	0	NaN	5816	2946	8762
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8765	24.889	NaN	1453.7	30	0	270.43	0.106	+			9617	ELPFCQPK	8	55	481.2451015620807	NaN	0	481.24505615234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ELPFCQPK_	ENSG00000165671|ENST00000439151|NSD1;nc|ENSG00000165671|Q96L73-2|NSD1;NSD1|p.K1753Sfs*10|1|0.17|ENSG00000165671|chr5:177267669-177267669|A/-|frameshift_variant	47.91560031466742	1.7418937515398478	4				NaN	NaN	0	NaN	5817	2946	8762
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8766	24.891	NaN	1648.8	30	0	101.06	0.106			+	33151	RESSIKKK	8	52	488.3027648925781	NaN	0	488.3027648925781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RESSIKKK_	REV__ENSG00000100644|ENST00000337138|HIF1A;REV__HIF1A|p.Y38Lfs*2|1|0.29|ENSG00000100644|chr14:61720452-61720453|-/T|frameshift_variant;REV__nc|ENSG00000100644|Q16665-2|HIF1A	32.81241826257853	1.7418937515398478	4				NaN	NaN	0	NaN	5818	2946	8762
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8767	24.893	NaN	2109.8	30	0	271.03	0.106	+			20468	KEVTEYLG	8	56	469.7452621695473	NaN	0	469.263427734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEVTEYLG_	ENST00000555263.1_1_14:96755932-96756910:-|nuORF	37.15910966729921	1.7418937515398478	4				NaN	NaN	0	NaN	5819	2946	8762
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8768	24.894	NaN	1960.1	30	0	855.91	0.037			+	21609	KPMKIKSKK	9	39	363.2386825521956	NaN	0	363.23876953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KPMKIKSKK_	REV__ENSG00000124942|ENST00000378024|AHNAK;REV__ENST00000525875.1_1_11:62201326-62284770:-|nuORF	19.1035232394073	0.3723251548669699	4				NaN	NaN	0	NaN	5820	2946	8762
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8769	24.895	NaN	1230.9	30	0	197.66	0.138	+			47455	VPVLIPCH	8	50	439.2528034988823	NaN	0	439.2532653808594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VPVLIPCH_	FAM24B|p.N43Ifs*48|1|0.19|ENSG00000213185|chr10:122849404-122849404|T/-|frameshift_variant	33.49298260027079	1.7418937515398478	4				NaN	NaN	0	NaN	5821	2946	8762
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8787	24.934	NaN	4026.1	30	0	924.45	0.214	+			45989	VATLWMDK	8	66	490.2503001626637	978.4860473921274	2	490.2472229003906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_VATLWM(Oxidation (M))DK_	nc|ENSG00000157326|Q9BTZ2-3|DHRS4	68.78682469695295	0.41700713582915416	4				NaN	NaN	0	NaN	5836	2949	8786
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8788	24.937	NaN	8486.6	30	0	714.04	0.106				-1	ERPADMDKAW	10	70	412.189922916801	1233.547939350603	3	412.1900329589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_ERPADM(Oxidation (M))DKAW_	ENSG00000149609|ENST00000375222|C20orf144	37.50817390946774	0.5721060100277453	4				NaN	NaN	0	NaN	5837	2949	8786
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8789	24.939	NaN	5122.2	30	0	1088.6	0.106	+			17086	HSAPVGAQL	9	49	440.2381679100444	878.4617828868888	2	440.2375183105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HSAPVGAQL_	ENSG00000164078|ENST00000296474|MST1R;MST1R|p.G755Vfs*19|3|0.19|ENSG00000164078|chr3:49896810-49896810|C/-|frameshift_variant;MST1R|p.S761Pfs*11|1|0.43|ENSG00000164078|chr3:49896794-49896800|ACCAGGT/-|frameshift_variant;nc|ENSG00000164078|Q04912-2|MST1R;nc|ENSG00000164078|Q04912-3|MST1R;nc|ENSG00000164078|Q04912-4|MST1R;nc|ENSG00000164078|Q04912-5|MST1R;nc|ENSG00000164078|Q04912-6|MST1R;nc|ENSG00000164078|Q04912-7|MST1R	58.78195531508484	0.22376836668196862	4				NaN	NaN	0	NaN	5838	2949	8786
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8790	24.941	NaN	4965.5	30	0	1991.2	0.106			+	17204	HVFGYGKSG	9	65	476.23872018576526	NaN	0	476.23846435546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HVFGYGKSG_	REV__ENSG00000070756|ENST00000318607|PABPC1;REV__ENSG00000151846|ENST00000281589|PABPC3;REV__nc|ENSG00000070756|P11940-2|PABPC1	28.2542754592877	0.3349171602345879	4				NaN	NaN	0	NaN	5839	2949	8786
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8791	24.943	NaN	4112.8	30	0	271.15	0.106	+			16538	HEVLVTTKV	9	69	513.3030598347068	1024.5915667362135	2	513.30322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HEVLVTTKV_	DHX40|p.A681T|1|0.17|ENSG00000108406|chr17:59605515-59605515|G/A|missense_variant;ENSG00000108406|ENST00000251241|DHX40;nc|ENSG00000108406|Q8IX18-2|DHX40;nc|ENSG00000108406|Q8IX18-3|DHX40;nc|ENSG00000108406|Q8IX18-4|DHX40	106.68306549817024	0.032382560583716295	4				NaN	NaN	0	NaN	5840	2949	8786
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8792	24.945	NaN	2384.8	30	0	292.56	0.106	+			37292	SLASTSTKV	9	57	447.2503469037893	892.4861408743786	2	447.2502746582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLASTSTKV_	ENSG00000070985|ENST00000696290|TRPM5;nc|ENSG00000070985|Q9NZQ8-2|TRPM5;nc|ENSG00000070985|Q9NZQ8-3|TRPM5	68.78682469695295	0.14603441672067394	4				NaN	NaN	0	NaN	5841	2949	8786
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8793	24.946	NaN	1304	30	0	742.15	0.03				-1	 	0	25	322.19345447342715	642.3723560136543	2	322.1935729980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5842	2949	8786
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8811	24.984	NaN	29224	30	0	10262	0.214	+			4310	ATGKLFAVK	9	78	467.78944965879896	933.5643463843979	2	467.7893981933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATGKLFAVK_	ENSG00000183049|ENST00000619168|CAMK1D;nc|ENSG00000183049|Q8IU85-2|CAMK1D	80.45461616416974	0.09558281504443908	4				NaN	NaN	0	NaN	5857	2952	8810
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8812	24.988	NaN	4333.6	30	0	1285.3	0.106	+			16043	HAVGPSTSL	9	46	434.7297463851956	867.4449398371912	2	434.72955322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HAVGPSTSL_	ENSG00000140262|ENST00000333725|TCF12;nc|ENSG00000140262|Q99081-2|TCF12;nc|ENSG00000140262|Q99081-4|TCF12;nc|ENSG00000140262|Q99081|TCF12;TCF12|p.D536Afs*2|1|0.04|ENSG00000140262|chr15:57263207-57263208|-/C|frameshift_variant;TCF12|p.V474Mfs*18|1|0.15|ENSG00000140262|chr15:57262114-57262123|CTCTGTCAGT/-|frameshift_variant	88.64286706044652	0.06869153472052109	4				NaN	NaN	0	NaN	5858	2952	8810
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8813	24.99	NaN	5616.1	30	0	1015.7	0.106	+			45078	TVICSTINK	9	64	518.2783654062564	1034.5421778793127	2	518.279052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_TVIC(Carbamidomethyl (C))STINK_	ACTR3B-JMJD1C|1|fusion;ENSG00000171988|ENST00000399262|JMJD1C;JMJD1C|p.A2114Cfs*5|1|0.04|ENSG00000171988|chr10:63189399-63189400|-/T|frameshift_variant;JMJD1C|p.I2113Kfs*18|1|0.04|ENSG00000171988|chr10:63189400-63189401|-/TT|frameshift_variant;nc|ENSG00000171988|Q15652-2|JMJD1C;nc|ENSG00000171988|Q15652-3|JMJD1C	104.0567914643314	0.03506238181059741	4				NaN	NaN	0	NaN	5859	2952	8810
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8814	24.992	NaN	2543.1	30	0	506.78	0.106	+			26265	LSTAQLVQ	8	45	430.2475768857971	NaN	0	430.2481689453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSTAQLVQ_	ENSG00000172349|ENST00000683961|IL16;IL16|p.L969Pfs*8|1|0.1|ENSG00000172349|chr15:81300226-81300227|-/C|frameshift_variant;IL16|p.N620Rfs*67|1|0.33|ENSG00000172349|chr15:81292982-81292983|-/AG|frameshift_variant;nc|ENSG00000172349|Q14005-2|IL16	27.882242232435846	1.7418937515398478	4				NaN	NaN	0	NaN	5860	2952	8810
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8815	24.993	NaN	2962.3	30	0	525.7	0.106	+			47677	VSDSGAHVL	9	55	442.72711764642065	883.4396823596413	2	442.7268981933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSDSGAHVL_	ENSG00000064102|ENST00000261191|INTS13	102.7733458925114	0.03637199559902695	4				NaN	NaN	0	NaN	5861	2952	8810
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8816	24.995	NaN	1561.2	30	0	647.47	0.035	+			32696	RAGPSHRPN	9	51	496.2641439306201	NaN	0	496.2638854980469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RAGPSHRPN_	ENST00000581229.5_1_17:27093700-27169785:-|nuORF;ENST00000581381.5_1_17:27104157-27169785:-|nuORF	34.172542307311794	0.30503706118289736	4				NaN	NaN	0	NaN	5862	2952	8810
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8817	24.996	NaN	1197.1	30	0	176.51	0.141	+			21800	KQYEGGIFK	9	41	535.2875084112244	1068.5604638892487	2	535.2872314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KQYEGGIFK_	ENSG00000114491|ENST00000232607|UMPS;nc|ENSG00000114491|P11172-2|UMPS;nc|ENSG00000114491|P11172-3|UMPS	31.529811441608018	0.5085848003137583	4				NaN	NaN	0	NaN	5863	2952	8810
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8835	25.034	NaN	248690	30	0	76307	0.174	+			41769	SVSNVVITK	9	92	473.7816290517407	945.5487051702814	2	473.7816162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSNVVITK_	ENSG00000085832|ENST00000371733|EPS15;EPS15|p.R789Dfs*14|1|0.37|ENSG00000085832|chr1:51361350-51361350|T/-|frameshift_variant;nc|ENSG00000085832|P42566-2|EPS15	174.8648734531126	0.001936507438084573	4				NaN	NaN	0	NaN	5878	2955	8834
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8836	25.037	NaN	8086.9	30	0	950.66	0.106	+			15490	GVAKIIISK	9	71	464.81283499658764	927.6111170599753	2	464.8128356933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GVAKIIISK_	ENSG00000125686|ENST00000300651|MED1	70.8162118820467	0.13725933411854815	4				NaN	NaN	0	NaN	5879	2955	8834
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8837	25.039	NaN	4269.5	30	0	1882.3	0.106	+			43486	TGPEGHVL	8	44	405.2111138080825	808.407674682965	2	405.211181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TGPEGHVL_	DPYSL3|p.A516Qfs*15|1|0.31|ENSG00000113657|chr5:147395638-147395638|G/-|frameshift_variant;ENSG00000092964|ENST00000521913|DPYSL2;ENSG00000113657|ENST00000343218|DPYSL3;ENSG00000151640|ENST00000338492|DPYSL4;ENST00000521983.1_1_8:26484742-26500445:+|nuORF;nc|ENSG00000092964|Q16555-2|DPYSL2;nc|ENSG00000092964|Q16555|DPYSL2;nc|ENSG00000113657|Q14195|DPYSL3	57.81127852772723	0.5234495074909924	4				NaN	NaN	0	NaN	5880	2955	8834
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8838	25.04	NaN	4166	30	0	1677.3	0.106				-1	ATGDMSGLLK	10	59	504.7552733961169	1007.4959938590338	2	504.75457763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_ATGDM(Oxidation (M))SGLLK_	ENSG00000127837|ENST00000248450|AAMP;ENST00000475678.5_1_2:219131145-219134809:-|nuORF;ENST00000489767.5_1_2:219130391-219134818:-|nuORF	61.691277971877994	0.35045824941635534	4				NaN	NaN	0	NaN	5881	2955	8834
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8839	25.042	NaN	2378.2	30	0	171.53	0.106	+			31833	QPRLAPAA	8	55	412.24276783276605	822.4709827323321	2	412.2429504394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QPRLAPAA_	ENST00000416247.3_1_6:11094319-11094565:+|nuORF	26.79610172149135	0.7524337208463756	4				NaN	NaN	0	NaN	5882	2955	8834
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8840	25.044	NaN	2029.8	30	0	464.39	0.106	+			2134	ALKATSAFLR	10	43	359.88510976426664	NaN	0	360.21954345703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ALKATSAFLR_	ENSG00000167077|ENST00000401548|MEI1;MEI1|p.K750Rfs*6|1|0.45|ENSG00000167077|chr22:41763301-41763302|AA/-|frameshift_variant;nc|ENSG00000167077|Q5TIA1-4|MEI1;nc|ENSG00000167077|Q5TIA1-6|MEI1	27.047317107675042	0.41136583337917604	4				NaN	NaN	0	NaN	5883	2955	8834
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8841	25.046	NaN	1634.6	30	0	101.04	0.035			+	19347	KAKPLFDTK	9	58	524.3131037292209	1046.6116545252416	2	524.3135986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KAKPLFDTK_	REV__ENSG00000080345|ENST00000444746|RIF1;REV__nc|ENSG00000080345|Q5UIP0-2|RIF1;REV__RIF1|p.E1442Gfs*4|1|0.39|ENSG00000080345|chr2:151463835-151463836|-/A|frameshift_variant;REV__RIF1|p.K1441Rfs*18|1|0.2|ENSG00000080345|chr2:151463836-151463836|A/-|frameshift_variant;REV__RIF1|p.K1505Rfs*18|3|0.3|ENSG00000080345|chr2:151464027-151464027|A/-|frameshift_variant	58.22992032128504	0.22837015374068087	4				NaN	NaN	0	NaN	5884	2955	8834
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8859	25.083	NaN	37828	30	0	8989.4	0.214	+			2642	AQITATIAK	9	70	458.77642347242266	915.5382940116453	2	458.7763977050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AQITATIAK_	ENSG00000011566|ENST00000263881|MAP4K3;MAP4K3|p.R261Kfs*5|1|0.41|ENSG00000011566|chr2:39325755-39325756|-/T|frameshift_variant;nc|ENSG00000011566|Q8IVH8-2|MAP4K3;nc|ENSG00000011566|Q8IVH8-3|MAP4K3	195.57289506066198	5.204600901213804E-05	4				NaN	NaN	0	NaN	5899	2958	8858
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8860	25.086	NaN	15906	30	0	3519.5	0.106	+			39047	SSSPPILTK	9	81	465.2685143394489	928.5224757456979	2	465.2686767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSSPPILTK_	ENSG00000083168|ENST00000265713|KAT6A;KAT6A|p.D1243Mfs*51|1|0.24|ENSG00000083168|chr8:41934493-41934493|C/-|frameshift_variant;KAT6A|p.P1694Tfs*13|1|0.25|ENSG00000083168|chr8:41933141-41933142|-/G|frameshift_variant	85.86182877749512	0.07653218437724067	4				NaN	NaN	0	NaN	5900	2958	8858
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8861	25.088	NaN	12681	30	0	3100.2	0.106	+			35937	SEGKAYSL	8	73	427.7163536604142	853.4181543876284	2	427.716064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEGKAYSL_	ENSG00000180198|ENST00000683442|RCC1;nc|ENSG00000180198|P18754-2|RCC1;RCC1|p.R320W|1|0.47|ENSG00000180198|chr1:28536767-28536767|C/T|missense_variant	71.87747018426188	0.391254423828572	4				NaN	NaN	0	NaN	5901	2958	8858
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8862	25.09	NaN	17708	30	0	3989.8	0.106				-1	WCWIWICFGWI	11	74	542.9165999944416	1625.727970583525	3	542.91748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_WC(Carbamidomethyl (C))WIWIC(Carbamidomethyl (C))FGWI_	ENST00000482384.1_1_1:109756594-109756711:+|nuORF	3.61906645146314	0.8634109586117306	4				NaN	NaN	0	NaN	5902	2958	8858
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8863	25.092	NaN	5624.4	30	0	1055.1	0.106	+			22660	KTYHALSNLP	10	52	381.878165268408	NaN	0	381.88751220703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KTYHALSNLP_	ENSG00000108671|ENST00000261712|PSMD11;nc|ENSG00000108671|O00231-2|PSMD11;PSMD11|p.P204Lfs*48|2|0.42|ENSG00000108671|chr17:32469156-32469156|C/-|frameshift_variant	44.377184641726394	0.34115073642966565	4				NaN	NaN	0	NaN	5903	2958	8858
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8864	25.094	NaN	989.46	30	0	161.1	0.035			+	1743	AHTRVHAKL	9	47	516.8063354492188	NaN	0	516.8063354492188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AHTRVHAKL_	REV__ENST00000398484.6_1_4:1019282-1019474:+|nuORF	35.15202426646627	0.3000918603816441	4				NaN	NaN	0	NaN	5904	2958	8858
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8865	25.094	NaN	2310.3	30	0	881.28	0.14			+	50484	YAKFTNNH	8	53	497.74065521040114	NaN	0	497.74041748046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YAKFTNNH_	REV__ENSG00000154856|ENST00000355285|APCDD1	53.351449002276354	1.7418937515398478	4				NaN	NaN	0	NaN	5905	2958	8858
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8883	25.132	NaN	98568	30	0	19512	0.214	+			43218	TEVKSVEM	8	93	461.7307485145483	921.4469440958966	2	461.7307434082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEVKSVEM_	ENSG00000101210|ENST00000217182|EEF1A2;ENSG00000156508|ENST00000309268|EEF1A1;ENST00000436459.2_1_9:135895553-135896258:+|nuORF;ENST00000447052.1_1_21:24762753-24763314:+|nuORF;ENST00000547505.2_1_12:44054314-44054545:+|nuORF;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	134.81075121484326	0.23895231276701365	4				NaN	NaN	0	NaN	5920	2961	8882
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8884	25.135	NaN	16842	30	0	2522.5	0.106	+			32736	RAPDVARAL	9	66	484.78513531990933	967.5557177066187	2	484.78497314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RAPDVARAL_	ENSG00000188157|ENST00000379370|AGRN;nc|ENSG00000188157|O00468-2|AGRN;nc|ENSG00000188157|O00468-3|AGRN;nc|ENSG00000188157|O00468-4|AGRN;nc|ENSG00000188157|O00468-5|AGRN;nc|ENSG00000188157|O00468-7|AGRN;nc|ENSG00000188157|O00468|AGRN	110.11987700582712	0.028875675806141952	4				NaN	NaN	0	NaN	5921	2961	8882
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8885	25.137	NaN	9658.8	30	0	4037.2	0.106			+	20760	KHEKGHYE	8	63	514.2512565444428	1026.4879601556854	2	514.2513427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KHEKGHYE_	REV__ENSG00000137822|ENST00000564079|TUBGCP4;REV__ENST00000562053.1_1_15:43689449-43690378:+|nuORF;REV__ENST00000563963.1_1_15:43687726-43694213:+|nuORF;REV__nc|ENSG00000137822|Q9UGJ1|TUBGCP4	53.351449002276354	0.5676011784961348	4				NaN	NaN	0	NaN	5922	2961	8882
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8886	25.139	NaN	5849.7	30	0	691.8	0.106	+			1371	AEVKEKVVL	9	78	507.8131537197059	1013.6117545062118	2	507.81317138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEVKEKVVL_	ENSG00000118898|ENST00000345988|PPL;PPL|p.K1530Gfs*18|1|0.27|ENSG00000118898|chr16:4884058-4884068|GCTCGCGCTTG/-|frameshift_variant	90.60085204095205	0.06317133949006545	4				NaN	NaN	0	NaN	5923	2961	8882
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8887	25.141	NaN	2589.9	30	0	400.2	0.106	+			23926	LDNVQVVL	8	53	450.2634582519531	NaN	0	450.2634582519531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LDNVQVVL_	ENSG00000135945|ENST00000258428|REV1;nc|ENSG00000135945|Q9UBZ9-2|REV1	44.116797842482775	1.7418937515398478	4				NaN	NaN	0	NaN	5924	2961	8882
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8888	25.143	NaN	2300.7	30	0	272.63	0.033	+			83	AACSIALGK	9	60	445.74174232020624	889.4689317072125	2	445.7415466308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_AAC(Carbamidomethyl (C))SIALGK_	ENSG00000103043|ENST00000261776|VAC14;ENST00000566655.1_1_16:70820075-70820303:-|nuORF	71.87747018426188	0.13267044672804276	4				NaN	NaN	0	NaN	5925	2961	8882
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8889	25.143	NaN	1856.6	30	0	172.41	0.14	+			21581	KPGQFPVLV	9	55	492.7954315811137	NaN	0	492.79534912109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KPGQFPVLV_	nc|ENSG00000211665|A0A075B6K0|IGLV3-16	30.503639358989545	0.3235605894931338	4				NaN	NaN	0	NaN	5926	2961	8882
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8907	25.182	NaN	45118	30	0	14293	0.214	+			44759	TTNDIVISK	9	83	495.77669222642373	989.5388315196475	2	495.7767028808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTNDIVISK_	ENSG00000113141|ENST00000417647|IK	223.3641303927214	4.17723635140725E-10	4				NaN	NaN	0	NaN	5941	2964	8906
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8908	25.185	NaN	8041.7	30	0	2848	0.106	+			44513	TSTCSPIISK	10	70	518.7705637741668	1035.5265746151335	2	518.771240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TSTCSPIISK_	ENSG00000170606|ENST00000304858|HSPA4;ENST00000514825.1_1_5:132437411-132440125:+|nuORF	74.1650062923329	0.2432923583094885	4				NaN	NaN	0	NaN	5942	2964	8906
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8909	25.187	NaN	4478.2	30	0	598.82	0.106			+	579	ADKFITLP	8	72	452.75877218094644	903.5029914286929	2	452.7590637207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ADKFITLP_	REV__ENSG00000123643|ENST00000243389|SLC36A1;REV__ENSG00000186335|ENST00000335244|SLC36A2;REV__nc|ENSG00000186335|Q495M3-2|SLC36A2;REV__nc|ENSG00000186335|Q495M3-3|SLC36A2	56.72105179125745	0.5342425954139568	4				NaN	NaN	0	NaN	5943	2964	8906
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8910	25.189	NaN	15029	30	0	7626.1	0.106	+			32286	QTMSDTTFK	9	71	529.7446164638847	1057.4746799945692	2	529.7454833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QTMSDTTFK_	ENSG00000116489|ENST00000263168|CAPZA1;ENSG00000198898|ENST00000361183|CAPZA2;ENST00000426421.5_1_7:116544367-116557918:+|nuORF;ENST00000466066.1_1_1:113202257-113212751:+|nuORF;ENST00000565906.2_1_15:89532752-89533049:-|nuORF	91.26522074875469	0.06129826844580791	4				NaN	NaN	0	NaN	5944	2964	8906
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8911	25.191	NaN	5197	30	0	1235.8	0.106	+			26915	LYDLLLEML	9	48	380.20831298828125	NaN	0	380.20831298828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_LYDLLLEM(Oxidation (M))L_	ENSG00000091831|ENST00000206249|ESR1;nc|ENSG00000091831|P03372-2|ESR1;nc|ENSG00000091831|P03372-3|ESR1	51.33545320467046	0.19748963086191895	4				NaN	NaN	0	NaN	5945	2964	8906
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8912	25.193	NaN	982.47	30	0	171.83	0.034	+			18387	IRGCDKSY	8	46	471.2269908429271	NaN	0	471.2273254394531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IRGCDKSY_	ENSG00000139800|ENST00000267294|ZIC5	42.396135135203025	1.7418937515398478	4				NaN	NaN	0	NaN	5946	2964	8906
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8913	25.193	NaN	3847.9	30	0	670.34	0.143			+	20659	KGKRVVKYGGA	11	47	388.23984227323905	1161.6976974199172	3	388.2400817871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KGKRVVKYGGA_	REV__ENST00000487682.5_1_1:156909295-156909928:-|nuORF	26.063383197487333	0.7164075632144343	4				NaN	NaN	0	NaN	5947	2964	8906
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8931	25.233	NaN	13828	30	0	1919.2	0.214			+	9268	EHAKPFRE	8	76	507.26174810352313	1012.5089432738463	2	507.2618408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EHAKPFRE_	REV__nc|ENSG00000086015|Q6P0Q8-2|MAST2	68.78682469695295	0.41700713582915416	4				NaN	NaN	0	NaN	5962	2967	8930
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8932	25.236	NaN	8899.2	30	0	2443.9	0.106	+			48829	VVASPIAAR	9	63	442.27154736314975	882.5285417930995	2	442.2714538574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVASPIAAR_	ENSG00000184363|ENST00000331563|PKP3;nc|ENSG00000184363|Q9Y446-2|PKP3	79.71258880314673	0.09879134589249085	4				NaN	NaN	0	NaN	5963	2967	8930
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8933	25.238	NaN	19689	30	0	3718.3	0.106			+	13218	GIGSVIARA	9	67	422.2559112771675	842.497269621135	2	422.2558288574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GIGSVIARA_	REV__ENST00000449891.5_1_2:238903425-238973015:+|nuORF	60.97194046774394	0.20551255781574032	4				NaN	NaN	0	NaN	5964	2967	8930
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8934	25.24	NaN	9514.4	30	0	3128.2	0.106			+	36620	SGFQIQKKK	9	50	355.21330214445976	1062.6180770335793	3	355.2134704589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SGFQIQKKK_	REV__ENST00000510832.5_1_4:189458328-189458415:+|nuORF	30.317721548370564	0.5199124245378496	4				NaN	NaN	0	NaN	5965	2967	8930
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8935	25.242	NaN	7941	30	0	2272.1	0.106	+			39329	STAVGLVTK	9	59	438.2633267494416	874.5121005656832	2	438.26300048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STAVGLVTK_	ASH1L|p.H1793Ifs*7|1|0.13|ENSG00000116539|chr1:155438778-155438778|G/-|frameshift_variant;ASH1L|p.I970Lfs*9|1|0.2|ENSG00000116539|chr1:155479962-155479962|T/-|frameshift_variant;ASH1L|p.K1222Rfs*11|4|0.27|ENSG00000116539|chr1:155479205-155479205|T/-|frameshift_variant;ASH1L|p.K1533Sfs*17|1|0.25|ENSG00000116539|chr1:155478272-155478272|T/-|frameshift_variant;ASH1L|p.K2377Nfs*5|1|0.28|ENSG00000116539|chr1:155354570-155354570|T/-|frameshift_variant;ASH1L|p.N1822Tfs*2|1|0.33|ENSG00000116539|chr1:155438690-155438690|T/-|frameshift_variant;ASH1L|p.R712Efs*23|3|0.35|ENSG00000116539|chr1:155480736-155480736|T/-|frameshift_variant;ASH1L|p.S2309Ifs*11|1|0.64|ENSG00000116539|chr1:155357635-155357636|-/T|frameshift_variant;ENSG00000116539|ENST00000392403|ASH1L;nc|ENSG00000116539|Q9NR48|ASH1L	106.68306549817024	0.032382560583716295	4				NaN	NaN	0	NaN	5966	2967	8930
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8936	25.244	NaN	3885.3	30	0	464.39	0.036	+			16401	HEQSRIITV	9	64	541.8014580258314	1081.5883631184627	2	541.8021850585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HEQSRIITV_	ENSG00000158006|ENST00000374282|PAFAH2	82.7504851949679	0.08565546331141553	4				NaN	NaN	0	NaN	5967	2967	8930
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8937	25.244	NaN	589.27	30	0	65.221	0.143	+			39994	STMRPLATAYK	11	42	619.8303439543986	1237.646134975597	2	619.8316040039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STMRPLATAYK_	ENSG00000163002|ENST00000295119|NUP35;nc|ENSG00000163002|Q8NFH5-2|NUP35;nc|ENSG00000163002|Q8NFH5-3|NUP35	39.873155843976775	0.5596786644756743	4				NaN	NaN	0	NaN	5968	2967	8930
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8955	25.284	NaN	58468	30	0	16324	0.214	+			39202	STAAVGVLK	9	83	423.2581056910226	844.5016584488452	2	423.2580261230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STAAVGVLK_	ENSG00000081019|ENST00000261441|RSBN1;ENST00000476412.5_1_1:114308604-114340019:-|nuORF	153.03582135801034	0.006161527642367307	4				NaN	NaN	0	NaN	5983	2970	8954
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8956	25.287	NaN	16140	30	0	4735.4	0.106	+			33168	RETSMVHEL	9	71	551.2714678610756	1100.5283827889511	2	551.272216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RETSMVHEL_	ENSG00000058262|ENST00000243253|SEC61A1;ENST00000498837.1_1_3:127786720-127788502:+|nuORF;nc|ENSG00000058262|P61619-3|SEC61A1	82.7504851949679	0.08565546331141553	4				NaN	NaN	0	NaN	5984	2970	8954
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8957	25.289	NaN	11009	30	0	2393.4	0.106	+			16026	HATIVSEKL	9	75	499.2872126607928	996.5598723883857	2	499.2870788574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HATIVSEKL_	ENSG00000144063|ENST00000272462|MALL;ENST00000568189.5_1_2:111003217-111043255:+|nuORF	166.0711670676379	0.003437550387609957	4				NaN	NaN	0	NaN	5985	2970	8954
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8958	25.291	NaN	3610.4	30	0	787.01	0.106	+			28659	NLLSTHVQG	9	58	484.76131986592543	NaN	0	484.7610778808594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NLLSTHVQG_	ATM|p.G2425Vfs*15|1|0.33|ENSG00000149311|chr11:108329204-108329204|G/-|frameshift_variant;ATM|p.K2303Rfs*7|2|0.24|ENSG00000149311|chr11:108326153-108326153|A/-|frameshift_variant;ATM|p.K2413Tfs*11|1|0.06|ENSG00000149311|chr11:108329168-108329169|-/CAACCAATTTAAATTAT|frameshift_variant;ATM|p.K2811Sfs*46|1|0.34|ENSG00000149311|chr11:108345750-108345750|A/-|frameshift_variant;ATM|p.L2231Wfs*4|1|0.52|ENSG00000149311|chr11:108325426-108325426|T/-|frameshift_variant;ATM|p.R1973Efs*17|1|0.26|ENSG00000149311|chr11:108310311-108310311|A/-|frameshift_variant;ENSG00000149311|ENST00000675843|ATM;ENST00000524792.5_1_11:108158320-108236232:+|nuORF	44.377184641726394	0.24544280798894275	4				NaN	NaN	0	NaN	5986	2970	8954
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8959	25.293	NaN	3987.5	30	0	491.78	0.106			+	31073	QFDKRAAL	8	68	474.76624547951315	NaN	0	474.766357421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QFDKRAAL_	REV__ENSG00000140538|ENST00000629765|NTRK3;REV__ENST00000559680.1_1_15:88474433-88483955:-|nuORF;REV__ETV6-NTRK3|1|fusion;REV__ETV6-NTRK3|2|fusion;REV__nc|ENSG00000140538|Q16288-3|NTRK3;REV__nc|ENSG00000140538|Q16288-4|NTRK3;REV__nc|ENSG00000140538|Q16288-5|NTRK3;REV__NTRK3|p.T578A|1|0.24|ENSG00000140538|chr15:87933169-87933169|T/C|missense_variant	51.33545320467046	1.7418937515398478	4				NaN	NaN	0	NaN	5987	2970	8954
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8960	25.295	NaN	2762.1	30	0	445.78	0.034			+	25007	LLFYSALL	8	63	470.2797156014853	938.5448782697706	2	470.284423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LLFYSALL_	REV__ENSG00000188603|ENST00000636147|CLN3;REV__ENST00000564574.5_2_16:28493646-28503072:-|nuORF;REV__ENST00000566083.6_2_16:28493835-28503080:-|nuORF;REV__nc|ENSG00000261832|Q13286-3|CLN3;REV__nc|ENSG00000261832|Q13286-4|CLN3;REV__nc|ENSG00000261832|Q13286-7|CLN3	21.70233525837049	0.7917639344264583	4				NaN	NaN	0	NaN	5988	2970	8954
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8961	25.295	NaN	2259.3	30	0	366.73	0.144	+			25216	LMNSWPFGDVL	11	50	426.87639509609363	NaN	0	426.8765563964844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LMNSWPFGDVL_	ENSG00000082556|ENST00000265572|OPRK1;nc|ENSG00000082556|P41145-2|OPRK1;OPRK1|p.S301Nfs*23|1|0.05|ENSG00000082556|chr8:53229537-53229538|GC/-|frameshift_variant	25.125986553469783	0.45344013546260314	4				NaN	NaN	0	NaN	5989	2970	8954
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8979	25.335	NaN	6300.1	30	0	1527.2	0.214	+			26180	LSRLQPVL	8	61	463.2948873740573	924.5752218149146	2	463.2945861816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSRLQPVL_	COL6A3|p.A2956Lfs*45|1|0.33|ENSG00000163359|chr2:237336234-237336234|C/-|frameshift_variant;COL6A3|p.A2957Lfs*44|1|0.33|ENSG00000163359|chr2:237336232-237336232|A/-|frameshift_variant;COL6A3|p.G1770Vfs*12|1|0.05|ENSG00000163359|chr2:237366878-237366879|-/TGGTGTAA|frameshift_variant;COL6A3|p.G2207Efs*35|1|0.22|ENSG00000163359|chr2:237354908-237354908|G/-|frameshift_variant;COL6A3|p.G3016Vfs*19|1|0.34|ENSG00000163359|chr2:237334810-237334810|G/-|frameshift_variant;COL6A3|p.P2319Qfs*12|1|0.06|ENSG00000163359|chr2:237348359-237348359|G/-|frameshift_variant;COL6A3|p.V1771Sfs*8|3|0.08|ENSG00000163359|chr2:237366876-237366876|C/-|frameshift_variant;ENSG00000163359|ENST00000295550|COL6A3;nc|ENSG00000163359|P12111-2|COL6A3;nc|ENSG00000163359|P12111-3|COL6A3;nc|ENSG00000163359|P12111-4|COL6A3;nc|ENSG00000163359|P12111-5|COL6A3	60.97194046774394	0.49215940876911696	4				NaN	NaN	0	NaN	6004	2973	8978
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8980	25.338	NaN	3383.7	30	0	430.59	0.106			+	20502	KFEQAAQL	8	58	467.7524244666018	NaN	0	467.7528381347656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KFEQAAQL_	REV__ENST00000377710.9_1_20:17950486-17950636:+|nuORF	64.20726635412375	1.7418937515398478	4				NaN	NaN	0	NaN	6005	2973	8978
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8981	25.34	NaN	5100.2	30	0	802.99	0.106	+			26388	LTEAPLNPK	9	69	491.78185983874306	981.5491667442861	2	491.7818603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LTEAPLNPK_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000403258.1_1_6:88986231-88986483:-|nuORF;ENST00000446382.2_1_9:6834760-6835018:+|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000502306.1_1_5:15450853-15451165:+|nuORF;ENST00000567299.1_1_19:9629420-9629708:+|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;nc|ENSG00000204434|Q9BYX7|POTEKP	115.49404669440601	0.023927554121326553	4				NaN	NaN	0	NaN	6006	2973	8978
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8982	25.342	NaN	905.69	30	0	114.3	0.106	+			24395	LGAAALLSA	9	46	393.7394104003906	NaN	0	393.7394104003906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LGAAALLSA_	ENSG00000171487|ENST00000390649|NLRP5	71.37791200682192	0.10092813839350395	4				NaN	NaN	0	NaN	6007	2973	8978
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8983	25.344	NaN	6137.7	30	0	2226.1	0.106	+			36400	SETKVFTA	8	62	441.73196282534695	881.4493727174939	2	441.73175048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SETKVFTA_	ENSG00000137073|ENST00000379238|UBAP2;UBAP2|p.K381Efs*18|1|0.03|ENSG00000137073|chr9:33948506-33948507|-/G|frameshift_variant;UBAP2|p.L380Sfs*2|1|0.03|ENSG00000137073|chr9:33948507-33948508|-/TT|frameshift_variant	98.62937762414208	0.25143494708580966	4				NaN	NaN	0	NaN	6008	2973	8978
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8984	25.346	NaN	1188.4	30	0	115.46	0.034				-1	SAMKAVTEL	9	53	483.25171607047866	964.4888792077573	2	483.25201416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_SAM(Oxidation (M))KAVTEL_	ENSG00000128245|ENST00000248975|YWHAH	37.81151784470057	0.4459294069877048	4				NaN	NaN	0	NaN	6009	2973	8978
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8985	25.346	NaN	1271.2	30	0	206.23	0.142			+	31776	QPIDPNQRY	9	51	565.7828858327175	1129.551218732235	2	565.7835693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QPIDPNQRY_	REV__EHHADH|p.K700Nfs*10|1|0.44|ENSG00000113790|chr3:185192298-185192298|T/-|frameshift_variant;REV__ENSG00000113790|ENST00000231887|EHHADH;REV__nc|ENSG00000113790|Q08426-2|EHHADH	39.252832667884924	0.4290233611298554	4				NaN	NaN	0	NaN	6010	2973	8978
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9003	25.386	NaN	16310	30	0	2229.8	0.214			+	7616	DKEPAVITK	9	75	500.7871434780928	999.5597340229856	2	500.78717041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DKEPAVITK_	REV__ENST00000493306.1_1_9:110249379-110249688:-|nuORF	93.5975768576971	0.05472259948179787	4				NaN	NaN	0	NaN	6025	2976	9002
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9004	25.389	NaN	6316	30	0	1954.7	0.106	+			45211	TVNSPAIYK	9	66	496.7749532069405	991.535353480681	2	496.7742614746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVNSPAIYK_	ENSG00000183520|ENST00000373014|UTP11;ENST00000488453.1_1_1:38483328-38489297:+|nuORF	72.87924865735499	0.12833875048249987	4				NaN	NaN	0	NaN	6026	2976	9002
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9005	25.391	NaN	5020.9	30	0	3446	0.106			+	11547	FPHSALER	8	52	478.75094568605283	955.4873384389057	2	478.7507629394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FPHSALER_	REV__ENST00000548710.5_3_12:49760692-49854587:+|nuORF;REV__ENST00000549412.5_2_12:49760692-49761130:+|nuORF	44.116797842482775	0.6307669463330267	4				NaN	NaN	0	NaN	6027	2976	9002
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9006	25.393	NaN	1919.1	30	0	364.16	0.106	+			20908	KITDVALEK	9	57	508.8031684210215	NaN	0	508.80303955078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KITDVALEK_	ENSG00000118564|ENST00000341285|FBXL5;FBXL5|p.S518Rfs*7|1|0.07|ENSG00000118564|chr4:15625550-15625551|-/ATCTTCT|frameshift_variant;nc|ENSG00000118564|Q9UKA1-2|FBXL5	66.96192283764107	0.11962625698446946	4				NaN	NaN	0	NaN	6028	2976	9002
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9007	25.395	NaN	6163.9	30	0	533.78	0.106			+	27195	MEATRLAP	8	67	444.7339903773646	887.4534278215292	2	444.7339172363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MEATRLAP_	REV__ENST00000602204.1_1_19:16980786-16982347:+|nuORF	40.77816245573522	0.6514838689002179	4				NaN	NaN	0	NaN	6029	2976	9002
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9008	25.397	NaN	1532.3	30	0	259.49	0.034			+	37333	SLEKKLQT	8	44	473.7817361706257	NaN	0	473.7816467285156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLEKKLQT_	REV__ENSG00000144674|ENST00000361924|GOLGA4;REV__GOLGA4|p.N1805Kfs*18|1|0.11|ENSG00000144674|chr3:37327293-37327294|-/A|frameshift_variant;REV__GOLGA4|p.N1805Tfs*6|1|0.38|ENSG00000144674|chr3:37327294-37327294|A/-|frameshift_variant;REV__nc|ENSG00000144674|Q13439-3|GOLGA4;REV__nc|ENSG00000144674|Q13439-4|GOLGA4;REV__nc|ENSG00000144674|Q13439-5|GOLGA4	26.69291269510374	1.7418937515398478	4				NaN	NaN	0	NaN	6030	2976	9002
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9009	25.397	NaN	8503.2	30	0	3947	0.139	+			17431	IATQVVVEK	9	62	493.7975318585079	985.5805107838158	2	494.27728271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IATQVVVEK_	ENSG00000204394|ENST00000375663|VARS1;nc|ENSG00000204394|P26640-2|VARS1;VARS|p.A620Pfs*25|1|0.23|ENSG00000204394|chr6:31782750-31782750|C/-|frameshift_variant;VARS|p.L801Wfs*10|1|0.3|ENSG00000204394|chr6:31781707-31781707|A/-|frameshift_variant	68.62578634547417	0.14673074753754126	4				NaN	NaN	0	NaN	6031	2976	9002
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9027	25.435	NaN	16157	30	0	9415.4	0.214	+			17432	IATQVVVEK	9	74	493.7975318585079	985.5805107838158	2	493.79736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IATQVVVEK_	ENSG00000204394|ENST00000375663|VARS1;nc|ENSG00000204394|P26640-2|VARS1;VARS|p.A620Pfs*25|1|0.23|ENSG00000204394|chr6:31782750-31782750|C/-|frameshift_variant;VARS|p.L801Wfs*10|1|0.3|ENSG00000204394|chr6:31781707-31781707|A/-|frameshift_variant	122.93914200107957	0.019420478173996256	4				NaN	NaN	0	NaN	6046	2979	9026
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9028	25.439	NaN	10898	30	0	2803.6	0.106	+			16744	HLPSGVKSL	9	72	469.2765336171588	936.5385143011176	2	469.276611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HLPSGVKSL_	ENSG00000163069|ENST00000381431|SGCB;nc|ENSG00000163069|Q16585-2|SGCB	75.04331003522576	0.118981335847003	4				NaN	NaN	0	NaN	6047	2979	9026
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9029	25.441	NaN	6094.7	30	0	776.63	0.106	+			43447	TGLSTQGLL	9	65	445.2532183518926	888.4918837705852	2	445.2529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TGLSTQGLL_	ENSG00000153214|ENST00000283206|TMEM87B;nc|ENSG00000153214|Q96K49-2|TMEM87B	54.776311868738084	0.25715957988447635	4				NaN	NaN	0	NaN	6048	2979	9026
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9030	25.443	NaN	1487.1	30	0	144.91	0.106				-1	 	0	46	609.6160278320312	NaN	0	609.6160278320312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6049	2979	9026
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9031	25.444	NaN	1411.8	30	0	273.73	0.106				-1	AAGPCMSVG	9	45	404.6699153282614	807.3252777233229	2	404.67022705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_AAGPCM(Oxidation (M))SVG_	ENSG00000187860|ENST00000338306|CCDC157;ENST00000475975.5_1_22:30758047-30767232:+|nuORF	40.5726180659479	0.4135428067754104	4				NaN	NaN	0	NaN	6050	2979	9026
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9032	25.446	NaN	2997.9	30	0	1117.1	0.036	+			16828	HPDSRAIMY	9	60	545.2608950899391	1088.5072372466782	2	545.2614135742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HPDSRAIMY_	ENSG00000116062|ENST00000234420|MSH6;MSH6|p.F882Lfs*24|1|0.31|ENSG00000116062|chr2:47800626-47800626|T/-|frameshift_variant;MSH6|p.G1105Wfs*3|2|0.25|ENSG00000116062|chr2:47803552-47803553|-/T|frameshift_variant;nc|ENSG00000116062|P52701-2|MSH6;nc|ENSG00000116062|P52701-3|MSH6;nc|ENSG00000116062|P52701-4|MSH6	64.20726635412375	0.17854274437659667	4				NaN	NaN	0	NaN	6051	2979	9026
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9033	25.447	NaN	4071.9	30	0	724.48	0.139	+			5565	AVAQAIMSK	9	61	459.7569638430824	917.4993747529649	2	459.7568054199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AVAQAIMSK_	ENSG00000099998|ENST00000327365|GGT5;nc|ENSG00000099998|P36269-2|GGT5;nc|ENSG00000099998|P36269-3|GGT5	81.52500206392136	0.09095445986635249	4				NaN	NaN	0	NaN	6052	2979	9026
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9051	25.486	NaN	9971.9	30	0	3003.1	0.214	+			45007	TVESVLLQAA	10	66	515.792654988509	1029.5707570438178	2	516.2948608398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVESVLLQAA_	CPSF3L|p.A562T|1|0.2|ENSG00000127054|chr1:1312071-1312071|C/T|missense_variant;ENSG00000127054|ENST00000435064|INTS11;ENST00000470030.6_1_1:1247241-1248711:-|nuORF;nc|ENSG00000127054|Q5TA45-2|INTS11;nc|ENSG00000127054|Q5TA45-3|INTS11;nc|ENSG00000127054|Q5TA45-4|INTS11;nc|ENSG00000127054|Q5TA45-5|INTS11	39.252832667884924	0.5560298534376815	4				NaN	NaN	0	NaN	6067	2982	9050
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9052	25.489	NaN	6920.3	30	0	2286.6	0.106	+			43276	TFGGLGSK	8	46	383.7081255063102	765.4016980794204	2	383.70831298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TFGGLGSK_	ENSG00000124942|ENST00000378024|AHNAK	32.81241826257853	0.7059802730411993	4				NaN	NaN	0	NaN	6068	2982	9050
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9053	25.491	NaN	1012.5	30	0	503.01	0.106				-1	 	0	32	344.22474779040084	686.4349426476017	2	344.2248840332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6069	2982	9050
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9054	25.493	NaN	2711.1	30	0	717.96	0.106			+	-1	LPLSTMKGP	9	62	480.2651268135117	958.5157006938234	2	480.2650451660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_LPLSTM(Oxidation (M))KGP_	REV__ENSG00000138802|ENST00000265175|SEC24B;REV__nc|ENSG00000138802|O95487-2|SEC24B;REV__nc|ENSG00000138802|O95487-3|SEC24B	44.116797842482775	0.37197099687881774	4				NaN	NaN	0	NaN	6070	2982	9050
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9055	25.495	NaN	3275.8	30	0	903.78	0.106	+			26339	LSYDYAVKK	9	46	362.86546795034934	1085.574574451248	3	362.8655700683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSYDYAVKK_	ENSG00000116005|ENST00000433351|PCYOX1;nc|ENSG00000116005|Q9UHG3-2|PCYOX1	45.9519527083369	0.35044536499095585	4				NaN	NaN	0	NaN	6071	2982	9050
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9056	25.497	NaN	2275.4	30	0	925.26	0.106	+			34522	RVGNTVSLE	9	61	487.76655944168186	973.5185659501637	2	487.7664489746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RVGNTVSLE_	ENST00000420329.6_1_15:91185432-91185957:+|nuORF	54.776311868738084	0.25715957988447635	4				NaN	NaN	0	NaN	6072	2982	9050
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9057	25.498	NaN	9863.1	30	0	2036.9	0.034	+			8156	EAAKGTLTY	9	66	477.2501965869322	952.4858402406644	2	477.25030517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EAAKGTLTY_	ENST00000367855.7_1_6:134492115-134495951:-|nuORF;ENST00000367857.9_1_6:134495759-134495951:-|nuORF;ENST00000474427.6_1_6:134495647-134495951:-|nuORF;ENST00000530421.5_1_6:134495091-134495951:-|nuORF;ENST00000532856.5_1_6:134494408-134495951:-|nuORF;ENST00000534658.5_1_6:134494506-134495951:-|nuORF;nc|ENSG00000118515|O00141|SGK1	134.81075121484326	0.012914550297035062	4				NaN	NaN	0	NaN	6073	2982	9050
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9073	25.529	NaN	14279	30	0	4080.2	0.214	+			42943	TEIRMARM	8	72	504.2598144249717	1006.5050759167434	2	504.2596740722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEIRMARM_	ENSG00000147604|ENST00000352983|RPL7;ENST00000430239.1_1_6:30664985-30665288:-|nuORF;ENST00000461190.1_1_3:123871117-123871351:-|nuORF	49.44154591367651	0.597725784090933	4				NaN	NaN	0	NaN	6086	2985	9072
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9074	25.533	NaN	13441	30	0	1421.4	0.106	+			34695	RVTPFILKK	9	80	367.90948601626917	1100.7066286490076	3	367.9094543457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RVTPFILKK_	ENSG00000175768|ENST00000321301|TOMM5;ENST00000354833.7_1_5:70213930-70214023:+|nuORF	90.60085204095205	0.06317133949006545	4				NaN	NaN	0	NaN	6087	2985	9072
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9075	25.535	NaN	8583.9	30	0	1455.3	0.106	+			34696	RVTPFILKK	9	65	551.3611071070002	1100.7076612808003	2	551.36083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RVTPFILKK_	ENSG00000175768|ENST00000321301|TOMM5;ENST00000354833.7_1_5:70213930-70214023:+|nuORF	68.84614121027924	0.14577793175421136	4				NaN	NaN	0	NaN	6088	2985	9072
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9076	25.537	NaN	3678.9	30	0	1379.7	0.106	+			4285	ATGGTFVVK	9	54	440.2500308569062	878.4855087806125	2	440.2498779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATGGTFVVK_	ENSG00000198208|ENST00000557413|RPS6KL1;ENST00000555834.5_1_14:75375979-75389943:-|nuORF;nc|ENSG00000198208|Q9Y6S9-2|RPS6KL1;nc|ENSG00000198208|Q9Y6S9-4|RPS6KL1	62.107414245175825	0.1960472003779324	4				NaN	NaN	0	NaN	6089	2985	9072
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9077	25.538	NaN	2790.2	30	0	522.87	0.106	+			19557	KCLGLDITK	9	65	524.2967239858542	1046.5788950385083	2	524.2968139648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_KC(Carbamidomethyl (C))LGLDITK_	ENSG00000054219|ENST00000263636|LY75;ENST00000484559.1_1_2:160728960-160761235:-|nuORF;LY75|p.K1412Rfs*2|4|0.39|ENSG00000054219|chr2:159816951-159816951|T/-|frameshift_variant;LY75|p.Q1410Tfs*6|1|0.07|ENSG00000054219|chr2:159816959-159816960|-/GGGTT|frameshift_variant;LY75|p.W1325Ffs*24|1|0.14|ENSG00000054219|chr2:159819905-159819906|-/TTTAAAGTTATTGA|frameshift_variant;nc|ENSG00000054219|O60449-2|LY75;nc|ENSG00000054219|O60449-3|LY75	62.107414245175825	0.1960472003779324	4				NaN	NaN	0	NaN	6090	2985	9072
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9078	25.54	NaN	2398.5	30	0	620.18	0.106			+	13941	GRVPLPSVA	9	51	448.27140111213197	NaN	0	448.2713623046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GRVPLPSVA_	REV__ENSG00000131183|ENST00000324417|SLC34A1;REV__nc|ENSG00000131183|Q06495-2|SLC34A1;REV__SLC34A1|p.F397Sfs*16|1|0.31|ENSG00000131183|chr5:177396742-177396742|C/-|frameshift_variant	26.69291269510374	0.34280015626154364	4				NaN	NaN	0	NaN	6091	2985	9072
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9079	25.542	NaN	959.17	30	0	88.664	0.036			+	7104	CYLAVVVSTE	10	48	542.2756058977328	NaN	0	542.275390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_CYLAVVVSTE_	REV__ENST00000537992.5_1_7:20449736-20449868:+|nuORF	21.9598887501803	0.4201028297492154	4				NaN	NaN	0	NaN	6092	2985	9072
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9097	25.579	NaN	5213.2	30	0	857.68	0.214	+			34177	RTCIKSLP	8	67	459.26362636774206	916.5126998022841	2	459.76611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTCIKSLP_	ENSG00000162402|ENST00000294383|USP24	49.44154591367651	0.597725784090933	4				NaN	NaN	0	NaN	6107	2988	9096
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9098	25.583	NaN	2935.9	30	0	598.89	0.106	+			44538	TSYSSEFSK	9	63	518.2347978585856	1034.455042783971	2	518.2352905273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TSYSSEFSK_	ENSG00000182473|ENST00000589210|EXOC7;ENST00000467586.5_1_17:74079731-74084011:-|nuORF;nc|ENSG00000182473|Q9UPT5-2|EXOC7;nc|ENSG00000182473|Q9UPT5-5|EXOC7;nc|ENSG00000182473|Q9UPT5-6|EXOC7;nc|ENSG00000182473|Q9UPT5|EXOC7	75.04331003522576	0.118981335847003	4				NaN	NaN	0	NaN	6108	2988	9096
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9099	25.585	NaN	4131	30	0	739.3	0.106	+			51240	YQEKGVRVL	9	67	546.3141218592922	1090.6136907853843	2	546.3141479492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YQEKGVRVL_	ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2	66.42927471994793	0.16001998865088202	4				NaN	NaN	0	NaN	6109	2988	9096
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9100	25.587	NaN	3243.9	30	0	651.78	0.106	+			14522	GTDLEAVAK	9	60	452.2428394697384	902.4711260062768	2	452.2424621582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTDLEAVAK_	BZW1|p.N285Tfs*11|2|0.26|ENSG00000082153|chr2:200818782-200818782|A/-|frameshift_variant;BZW1|p.N286*|1|0.04|ENSG00000082153|chr2:200818790-200818791|-/T|frameshift_variant;BZW1|p.S325Rfs*19|1|0.04|ENSG00000082153|chr2:200819989-200819990|-/ACAATATAGAA|frameshift_variant;ENSG00000082153|ENST00000409600|BZW1;ENST00000464483.1_1_2:201677931-201680272:+|nuORF;nc|ENSG00000082153|Q7L1Q6-2|BZW1;nc|ENSG00000082153|Q7L1Q6-3|BZW1;nc|ENSG00000082153|Q7L1Q6-4|BZW1	72.87924865735499	0.12833875048249987	4				NaN	NaN	0	NaN	6110	2988	9096
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9101	25.589	NaN	2941.6	30	0	352.53	0.106	+			38417	SSAGPGLLK	9	53	415.24268074236784	828.4708085515357	2	415.242431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSAGPGLLK_	CON__P08729;CON__Q3KNV1;ENSG00000135480|ENST00000331817|KRT7;ENST00000549638.1_1_12:52641943-52642541:+|nuORF;ENST00000550153.1_1_12:52641566-52642541:+|nuORF;ENST00000552322.5_1_12:52638288-52642544:+|nuORF	54.776311868738084	0.25715957988447635	4				NaN	NaN	0	NaN	6111	2988	9096
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9102	25.59	NaN	1416	30	0	768.17	0.106			+	13341	GKRSFTALY	9	29	348.19403625823065	1041.560279374892	3	348.1943054199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GKRSFTALY_	REV__ENST00000487066.5_1_17:16344775-16344985:+|nuORF	24.20275056022122	0.577060078256802	4				NaN	NaN	0	NaN	6112	2988	9096
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9103	25.592	NaN	6436.2	30	0	1236.7	0.039				-1	AADDFRTKRM	10	73	409.53658171804534	1225.587915754336	3	409.53619384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_AADDFRTKRM(Oxidation (M))_	ENST00000425692.6_1_17:16723399-16724021:-|nuORF	31.634271133179894	0.6214930414500597	4				NaN	NaN	0	NaN	6113	2988	9096
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9121	25.63	NaN	4143.7	30	0	1042.2	0.214	+			44749	TTMQALAEK	9	66	496.7577836454046	991.5010143576092	2	496.7580261230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTMQALAEK_	ENSG00000166037|ENST00000325542|CEP57;ENST00000539855.5_1_11:95532492-95564417:+|nuORF;nc|ENSG00000166037|Q86XR8-2|CEP57;nc|ENSG00000166037|Q86XR8-3|CEP57;nc|ENSG00000166037|Q86XR8-4|CEP57;nc|ENSG00000166037|Q86XR8-5|CEP57	72.2432373244024	0.13108886737667413	4				NaN	NaN	0	NaN	6128	2991	9120
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9122	25.633	NaN	4265.2	30	0	738.49	0.106			+	45145	TVLQNSVV	8	55	430.24811139192684	858.4816698506537	2	430.2480773925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVLQNSVV_	REV__ENST00000506915.1_1_4:190395906-190396341:+|nuORF	51.33545320467046	0.5859736979383976	4				NaN	NaN	0	NaN	6129	2991	9120
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9123	25.635	NaN	5665.4	30	0	1127.2	0.106			+	41659	SVRCIVQL	8	62	459.26362636774206	916.5126998022841	2	460.2642517089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVRCIVQL_	REV__ENST00000436137.2_1_11:124530361-124543691:-|nuORF	44.116797842482775	0.6307669463330267	4				NaN	NaN	0	NaN	6130	2991	9120
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9124	25.637	NaN	3847.1	30	0	373.36	0.106	+			6392	AVVETSLTK	9	68	474.2743835449219	NaN	0	474.2743835449219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVVETSLTK_	ACAP2|p.G547Efs*90|1|0.05|ENSG00000114331|chr3:195295740-195295741|-/TTCTACATATT|frameshift_variant;ACAP2|p.N618Tfs*15|1|0.31|ENSG00000114331|chr3:195292365-195292365|T/-|frameshift_variant;ENSG00000114331|ENST00000326793|ACAP2;ENST00000480906.5_1_3:195057651-195163594:-|nuORF;ENST00000481463.5_1_3:195078468-195162982:-|nuORF	60.11826168202944	0.14881452885248947	4				NaN	NaN	0	NaN	6131	2991	9120
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9125	25.639	NaN	1562.6	30	0	277.88	0.106	+			43131	TERSKATP	8	46	445.24029541015625	NaN	0	445.24029541015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TERSKATP_	ENSG00000100084|ENST00000263208|HIRA;ENST00000509549.5_1_22:19341546-19435194:-|nuORF;HIRA|p.R605Efs*31|1|0.26|ENSG00000100084|chr22:19361894-19361894|G/-|frameshift_variant;nc|ENSG00000100084|P54198-2|HIRA	42.86426827375447	1.7418937515398478	4				NaN	NaN	0	NaN	6132	2991	9120
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9126	25.641	NaN	6896.1	30	0	495.71	0.106	+			7826	DPVEPHGEM	9	69	505.7160480668793	1009.4175432005586	2	505.7164001464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DPVEPHGEM_	ENSG00000130726|ENST00000253024|TRIM28;ENST00000601150.5_1_19:59059168-59060232:+|nuORF;nc|ENSG00000130726|Q13263-2|TRIM28	84.9155231211612	0.07920012719736333	4				NaN	NaN	0	NaN	6133	2991	9120
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9127	25.643	NaN	2149.2	30	0	586.96	0.037	+			51464	YVHDAPVRSL	10	44	578.8100220158733	1155.6054910985465	2	578.8106079101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YVHDAPVRSL_	ENSG00000125538|ENST00000263341|IL1B;ENST00000487639.1_1_2:113588742-113591137:-|nuORF;ENST00000491056.5_1_2:113587940-113590763:-|nuORF	50.033510581677724	0.4566913063131936	4				NaN	NaN	0	NaN	6134	2991	9120
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9145	25.68	NaN	14633	30	0	6580.6	0.214	+			31759	QPFGGGSHM	9	73	459.2002725196996	916.3859921061992	2	459.2005615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QPFGGGSHM_	ENSG00000077150|ENST00000661543|NFKB2;ENST00000336486.5_1_10:104157832-104159780:+|nuORF;ENST00000467116.5_1_10:104155716-104158713:+|nuORF;nc|ENSG00000077150|Q00653-3|NFKB2;nc|ENSG00000077150|Q00653-4|NFKB2	82.30502934623384	0.08758161712619916	4				NaN	NaN	0	NaN	6149	2994	9144
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9146	25.684	NaN	7163.1	30	0	1272	0.106			+	47422	VPQSPYHAM	9	66	515.242946840152	1028.4713407471038	2	515.2435302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VPQSPYHAM_	REV__ATXN2L|p.Q1002Kfs*50|2|0.29|ENSG00000168488|chr16:28836029-28836029|G/-|frameshift_variant;REV__ENSG00000168488|ENST00000336783|ATXN2L;REV__ENST00000563314.5_1_16:28834580-28846939:+|nuORF;REV__nc|ENSG00000168488|Q8WWM7-2|ATXN2L;REV__nc|ENSG00000168488|Q8WWM7-3|ATXN2L;REV__nc|ENSG00000168488|Q8WWM7-4|ATXN2L;REV__nc|ENSG00000168488|Q8WWM7-5|ATXN2L;REV__nc|ENSG00000168488|Q8WWM7-6|ATXN2L;REV__nc|ENSG00000168488|Q8WWM7-8|ATXN2L;REV__nc|ENSG00000168488|Q8WWM7-9|ATXN2L	58.78195531508484	0.22376836668196862	4				NaN	NaN	0	NaN	6150	2994	9144
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9147	25.686	NaN	4399.4	30	0	841.83	0.106	+			40318	STSTLDLGK	9	58	461.2476704951851	920.4807880571702	2	461.2477111816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STSTLDLGK_	ENSG00000167113|ENST00000300452|COQ4;nc|ENSG00000167113|Q9Y3A0-2|COQ4	65.46538089061403	0.16805504838372562	4				NaN	NaN	0	NaN	6151	2994	9144
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9148	25.688	NaN	1653.7	30	0	122.9	0.106	+			22083	KSLQFVVGR	9	56	517.3117803052121	1032.609007677224	2	517.3121337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KSLQFVVGR_	ENSG00000070748|ENST00000337653|CHAT;nc|ENSG00000070748|P28329-2|CHAT;nc|ENSG00000070748|P28329-3|CHAT	25.57405402267927	0.5642445186134241	4				NaN	NaN	0	NaN	6152	2994	9144
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9149	25.689	NaN	3044.5	30	0	341.67	0.106	+			46851	VIGPKGMLK	9	65	471.79390022183514	941.5732475104703	2	471.7939758300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VIGPKGMLK_	ENSG00000103222|ENST00000399410|ABCC1;nc|ENSG00000103222|P33527-2|ABCC1;nc|ENSG00000103222|P33527-4|ABCC1;nc|ENSG00000103222|P33527-6|ABCC1;nc|ENSG00000103222|P33527-9|ABCC1	63.30626980617807	0.18605348971131092	4				NaN	NaN	0	NaN	6153	2994	9144
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9150	25.691	NaN	4101.1	30	0	1945.2	0.035			+	32557	QVVAPPTPPA	10	60	488.7765344697166	975.5385160062332	2	488.77728271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QVVAPPTPPA_	REV__sp|F5HEA3|TEG7_HCMVMTegumentproteinUL51homologOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL71PE=3SV=1	32.81241826257853	0.6118718159329168	4				NaN	NaN	0	NaN	6154	2994	9144
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9151	25.692	NaN	1978.4	30	0	139.08	0.14	+			30476	QAELTGLRL	9	55	500.79266920190736	999.5707854706147	2	500.7936096191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QAELTGLRL_	ENSG00000247077|ENST00000498926|PGAM5;nc|ENSG00000247077|Q96HS1-2|PGAM5	42.86426827375447	0.38666266728046506	4				NaN	NaN	0	NaN	6155	2994	9144
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9169	25.731	NaN	46005	30	0	18476	0.214	+			5491	AVADAVIEK	9	75	458.260724868717	914.506896804234	2	458.26068115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVADAVIEK_	ENSG00000116874|ENST00000235521|WARS2;ENST00000369426.9_1_1:119575536-119588262:-|nuORF	138.06239232086	0.011389075116295402	4				NaN	NaN	0	NaN	6170	2997	9168
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9170	25.735	NaN	10712	30	0	1811.8	0.106	+			27907	MTSTMTIGK	9	66	485.240537109295	NaN	0	485.24041748046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MTSTMTIGK_	ENSG00000131781|ENST00000254090|FMO5	95.81516180277367	0.029873745472008544	4				NaN	NaN	0	NaN	6171	2997	9168
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9171	25.737	NaN	4389.9	30	0	848.05	0.106	+			23883	LDHLLRFH	8	64	525.7944605989436	1049.574368264687	2	525.2908325195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LDHLLRFH_	ENST00000498873.5_1_4:120419020-120434055:+|nuORF	50.0245360154114	0.5941082100236891	4				NaN	NaN	0	NaN	6172	2997	9168
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9172	25.738	NaN	8301.9	30	0	1697.4	0.106	+			27886	MTMDKSELVQK	11	65	437.2209263975593	1308.640949792878	3	437.2210388183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MTMDKSELVQK_	ENSG00000166913|ENST00000353703|YWHAB	58.62960593111931	0.3356877741313683	4				NaN	NaN	0	NaN	6173	2997	9168
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9173	25.74	NaN	1937.1	30	0	141.8	0.106			+	10172	ESYLTLRPV	9	64	539.3000097282452	1076.5854665232903	2	539.30078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ESYLTLRPV_	REV__nc|ENSG859|P60507|ERVFC1	40.77816245573522	0.41113185337114944	4				NaN	NaN	0	NaN	6174	2997	9168
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9174	25.742	NaN	3501.8	30	0	1358.8	0.033	+			14211	GSSGFKPTL	9	45	447.2397143995193	892.4648758658386	2	447.239990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GSSGFKPTL_	ENSG00000126883|ENST00000359428|NUP214;nc|ENSG00000126883|P35658-2|NUP214;nc|ENSG00000126883|P35658-3|NUP214;nc|ENSG00000126883|P35658-4|NUP214;nc|ENSG00000126883|P35658-5|NUP214;NUP214|p.P1285Rfs*3|1|0.28|ENSG00000126883|chr9:131197346-131197359|CCCAGGAGAACCTG/-|frameshift_variant	32.81241826257853	0.4965981579233955	4				NaN	NaN	0	NaN	6175	2997	9168
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9175	25.743	NaN	1297.2	30	0	387.55	0.14			+	38368	SRRRRSNQ	8	39	530.297607421875	NaN	0	530.297607421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SRRRRSNQ_	REV__F13A1|p.V564Sfs*13|1|0.09|ENSG00000124491|chr6:6174637-6174637|C/-|frameshift_variant	19.996771675451527	1.7418937515398478	4				NaN	NaN	0	NaN	6176	2997	9168
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9193	25.873	NaN	24207	30	0	6079.1	0.142	+			42690	TCTAAHPEL	9	66	471.72075247065084	941.4269520081017	2	471.7206726074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TCTAAHPEL_	nc|ENSG00000211890|P01877-1|IGHA2;nc|ENSG00000211890|P01877|IGHA2	108.08749611321984	0.03094949498378333	4				NaN	NaN	0	NaN	6191	3000	9192
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9211	25.911	NaN	128060	30	0	36220	0.214	+			41850	SVSTVLTSK	9	88	461.26609558503606	920.5176382368721	2	461.2657470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSTVLTSK_	ENSG00000188536|ENST00000251595|HBA2;ENSG00000206172|ENST00000320868|HBA1;HBA1|p.A131T|1|0.07|ENSG00000206172|chr16:177373-177373|G/A|missense_variant	109.43880257439609	0.029570636687953285	4				NaN	NaN	0	NaN	6206	3003	9210
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9212	25.914	NaN	11209	30	0	1085.2	0.106				-1	 	0	73	509.28195375692565	508.27467729032566	1	509.281982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6207	3003	9210
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9213	25.916	NaN	10829	30	0	1147.8	0.106	+			19930	KEFEGKTLV	9	84	525.7944605989436	1049.574368264687	2	525.7952270507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEFEGKTLV_	ENSG00000080824|ENST00000216281|HSP90AA1;ENST00000378770.1_1_4:190394307-190396341:+|nuORF;ENST00000530115.1_1_11:27910903-27911533:-|nuORF;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000205100|Q58FG1|HSP90AA4P	140.11223852658463	0.010427410095706195	4				NaN	NaN	0	NaN	6208	3003	9210
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9214	25.918	NaN	3259.9	30	0	1167.3	0.106	+			48354	VTGPKKTY	8	56	447.2579810073265	892.5014090814531	2	447.2577209472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTGPKKTY_	ENSG00000145012|ENST00000617246|LPP;LPP|p.C364Lfs*29|1|0.29|ENSG00000145012|chr3:188609815-188609816|-/C|frameshift_variant	53.351449002276354	0.5676011784961348	4				NaN	NaN	0	NaN	6209	3003	9210
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9215	25.92	NaN	1933.9	30	0	356.87	0.106	+			17437	IAVGKGSSL	9	39	416.2499566339112	830.4853603346224	2	416.2500915527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IAVGKGSSL_	ENSG00000142871|ENST00000451137|CCN1	26.69291269510374	0.5537881896960711	4				NaN	NaN	0	NaN	6210	3003	9210
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9216	25.922	NaN	4630.2	30	0	1137.5	0.034	+			37241	SKSVVAQIP	9	53	464.7765600660913	927.5385671989826	2	464.77642822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SKSVVAQIP_	ENSG00000275052|ENST00000616407|PPP4R3B;nc|ENSG00000275052|Q5MIZ7-2|PPP4R3B;nc|ENSG00000275052|Q5MIZ7-3|PPP4R3B;nc|ENSG00000275052|Q5MIZ7-5|PPP4R3B	60.11826168202944	0.21262886028301267	4				NaN	NaN	0	NaN	6211	3003	9210
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9217	25.922	NaN	1873.9	30	0	565.24	0.143			+	48314	VTEVTRALL	9	26	334.537735061331	1000.5913757841929	3	334.5377502441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VTEVTRALL_	REV__ENSG00000135372|ENST00000257829|NAT10;REV__nc|ENSG00000135372|Q9H0A0-2|NAT10	24.20275056022122	0.577060078256802	4				NaN	NaN	0	NaN	6212	3003	9210
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9235	25.96	NaN	41311	30	0	21722	0.214			+	18695	ITDELVIIN	9	66	515.2954442932065	1028.576335653213	2	515.2962646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ITDELVIIN_	REV__ENST00000478090.5_1_2:99689501-99743552:-|nuORF;REV__ENST00000489926.6_1_2:99725972-99757602:-|nuORF	55.50420428727701	0.2510918378945873	4				NaN	NaN	0	NaN	6227	3006	9234
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9236	25.964	NaN	23208	30	0	2039.6	0.106	+			12152	GAIKVFVNK	9	77	488.30271337980514	974.5908738264103	2	488.30303955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GAIKVFVNK_	ENSG00000131725|ENST00000254029|WDR44;nc|ENSG00000131725|Q5JSH3-2|WDR44;nc|ENSG00000131725|Q5JSH3-4|WDR44;WDR44|p.F898L|1|0.26|ENSG00000131725|chrX:118448939-118448939|C/A|missense_variant	129.68262048586715	0.015338143639892752	4				NaN	NaN	0	NaN	6228	3006	9234
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9237	25.966	NaN	29570	30	0	10072	0.106	+			4663	ATLQNVLRK	9	48	348.21695096666355	1041.6290235001907	3	348.2171325683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATLQNVLRK_	ENSG00000108424|ENST00000290158|KPNB1;nc|ENSG00000108424|Q14974-2|KPNB1	29.170058357718403	0.5306379469863586	4				NaN	NaN	0	NaN	6229	3006	9234
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9238	25.968	NaN	4759.6	30	0	1630.8	0.106	+			596	ADLVAVTKS	9	57	452.2609996362752	902.5074463393504	2	452.26092529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ADLVAVTKS_	ENSG00000151611|ENST00000649156|MMAA	82.24051045832904	0.08786059719216216	4				NaN	NaN	0	NaN	6230	3006	9234
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9239	25.97	NaN	2903.4	30	0	857.04	0.106	+			44544	TTAAVGVLK	9	54	430.2661147018709	858.5176764705418	2	430.2659606933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TTAAVGVLK_	ENSG00000187257|ENST00000334955|RSBN1L;ENST00000462800.1_1_7:77397938-77402638:+|nuORF;ENST00000468035.1_1_7:77394853-77402638:+|nuORF;nc|ENSG00000187257|Q6PCB5-2|RSBN1L;PTPN12-RSBN1L|1|fusion;PTPN12-RSBN1L|2|fusion;PTPN12-RSBN1L|3|fusion;PTPN12-RSBN1L|4|fusion;PTPN12-RSBN1L|5|fusion;PTPN12-RSBN1L|6|fusion;PTPN12-RSBN1L|7|fusion;PTPN12-RSBN1L|8|fusion	87.75429964447693	0.0711966946989736	4				NaN	NaN	0	NaN	6231	3006	9234
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9240	25.971	NaN	5568.1	30	0	1826.2	0.106	+			9559	ELFQLRLA	8	62	495.2943084440704	988.5740639549408	2	495.2943420410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ELFQLRLA_	PC|p.P492L|1|0.42|ENSG00000173599|chr11:66853277-66853277|G/A|missense_variant	63.30626980617807	0.4690498839812213	4				NaN	NaN	0	NaN	6232	3006	9234
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9241	25.973	NaN	3677.3	30	0	479.84	0.033			+	-1	NVGCDMAL	8	61	440.1883490421806	878.3621451511613	2	440.1884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_NVGC(Carbamidomethyl (C))DMAL_	REV__ENSG00000165140|ENST00000375326|FBP1;REV__FBP1|p.G294Efs*11|1|0.11|ENSG00000165140|chr9:94603517-94603517|C/-|frameshift_variant	30.503639358989545	0.7238069182250283	4				NaN	NaN	0	NaN	6233	3006	9234
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9259	26.011	NaN	40094	30	0	5900.7	0.214	+			7336	DAVRTKMVY	9	82	541.7863427079327	1081.5581324826653	2	541.7871704101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DAVRTKMVY_	ENSG00000149100|ENST00000531120|EIF3M;nc|ENSG00000149100|Q7L2H7-2|EIF3M	104.0567914643314	0.03506238181059741	4				NaN	NaN	0	NaN	6248	3009	9258
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9260	26.014	NaN	24002	30	0	6818.2	0.106	+			4180	ATFLLNEAPER	11	68	420.8907316688761	1259.6503656068282	3	420.8907775878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATFLLNEAPER_	ENST00000548860.5_1_12:49209223-49210729:+|nuORF	45.908116695636124	0.4771019740774998	4				NaN	NaN	0	NaN	6249	3009	9258
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9261	26.016	NaN	19975	30	0	8408.3	0.106	+			5899	AVLDEAKNINK	11	55	405.5626013363898	1213.6659746093694	3	405.5626220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVLDEAKNINK_	ENSG00000155980|ENST00000455537|KIF5A;ENSG00000168280|ENST00000435030|KIF5C;ENSG00000170759|ENST00000302418|KIF5B;KIF5B|p.M622Wfs*8|1|0.15|ENSG00000170759|chr10:32022898-32022898|T/-|frameshift_variant;KIF5C|p.S816Vfs*68|1|0.35|ENSG00000168280|chr2:149005459-149005459|A/-|frameshift_variant;nc|ENSG00000168280|O60282-2|KIF5C	31.529811441608018	0.6590691889962369	4				NaN	NaN	0	NaN	6250	3009	9258
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9262	26.018	NaN	5730.9	30	0	1327	0.106			+	19589	KDEFAQIK	8	63	489.76582761294213	977.5171022926843	2	489.7659912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KDEFAQIK_	REV__ENSG00000197415|ENST00000362010|VEPH1;REV__nc|ENSG00000197415|Q14D04-2|VEPH1;REV__VEPH1|p.N441Tfs*42|1|0.28|ENSG00000197415|chr3:157364318-157364318|T/-|frameshift_variant;REV__VEPH1|p.T738Hfs*27|1|0.26|ENSG00000197415|chr3:157265579-157265579|T/-|frameshift_variant	57.81127852772723	0.5234495074909924	4				NaN	NaN	0	NaN	6251	3009	9258
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9263	26.02	NaN	7485.6	30	0	2316.9	0.106	+			22479	KTNAIISLK	9	67	494.3131184287446	986.6116839242892	2	494.3133239746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KTNAIISLK_	ENST00000539028.1_1_12:10010098-10010200:-|nuORF	154.0112374973812	0.005934173778894772	4				NaN	NaN	0	NaN	6252	3009	9258
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9264	26.022	NaN	4371.6	30	0	440.97	0.038	+			48975	VVGGLAVGK	9	65	400.255383532335	798.49621413147	2	400.2552795410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VVGGLAVGK_	ENSG00000103249|ENST00000382745|CLCN7;ENST00000563822.1_1_16:1505719-1509320:-|nuORF;ENST00000564968.1_1_16:1507514-1509320:-|nuORF;nc|ENSG00000103249|P51798-2|CLCN7;RBCK1-CLCN7|1|fusion;RBCK1-CLCN7|2|fusion	31.954861631926434	0.5046124803899898	4				NaN	NaN	0	NaN	6253	3009	9258
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9265	26.022	NaN	2603.6	30	0	363.55	0.14				-1	LDRIGSMSG	9	57	476.2299157765687	NaN	0	476.22991943359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_LDRIGSM(Oxidation (M))SG_	ENSG00000163273|ENST00000409852|NPPC	42.396135135203025	0.2590952873412954	4				NaN	NaN	0	NaN	6254	3009	9258
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9283	26.061	NaN	23449	30	0	8330	0.214	+			14972	GTMTGMLYK	9	77	509.2402878902819	1016.4660228473638	2	509.2406921386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_GTM(Oxidation (M))TGMLYK_	ENSG00000178440|ENST00000651763|TIMM23B-AGAP6;ENSG00000204152|ENST00000651259|TIMM23B;ENSG00000265354|ENST00000580018|TIMM23;nc|ENSG00000204152|Q5SRD1-2|TIMM23B	131.03138772384656	0.014687601201650916	4				NaN	NaN	0	NaN	6269	3012	9282
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9284	26.064	NaN	28040	30	0	14889	0.106	+			14712	GTIKDIVTR	9	81	501.800477076316	1001.586401219432	2	501.8004150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTIKDIVTR_	ENSG00000196305|ENST00000443024|IARS1;ENST00000490438.1_1_9:95050027-95055918:-|nuORF	117.5257442709337	0.022697614825424036	4				NaN	NaN	0	NaN	6270	3012	9282
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9285	26.066	NaN	6436.1	30	0	1170.1	0.106	+			17034	HPVQHISF	8	64	482.7529962722938	963.4914396113876	2	482.7533874511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HPVQHISF_	ENSG00000174989|ENST00000652555|FBXW8;nc|ENSG00000174989|Q8N3Y1-2|FBXW8	106.41520541750704	0.2471395129373963	4				NaN	NaN	0	NaN	6271	3012	9282
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9286	26.068	NaN	2029.9	30	0	445.09	0.106			+	33658	RNEASDIAEPS	11	50	594.778189476037	NaN	0	594.7777709960938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RNEASDIAEPS_	REV__CAD|p.N1541Mfs*15|1|0.33|ENSG00000084774|chr2:27237773-27237773|A/-|frameshift_variant;REV__CAD|p.Q1172Tfs*37|1|0.41|ENSG00000084774|chr2:27234113-27234114|-/C|frameshift_variant;REV__ENSG00000084774|ENST00000264705|CAD;REV__ENST00000475695.1_1_2:27455969-27456440:+|nuORF	36.446750945000026	0.40298828388271424	4				NaN	NaN	0	NaN	6272	3012	9282
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9287	26.07	NaN	4504	30	0	1617	0.106			+	4692	ATLSLDSLFQ	10	31	365.5292759170771	1093.5659983514313	3	365.5293273925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATLSLDSLFQ_	REV__ENSG00000163710|ENST00000295992|PCOLCE2;REV__PCOLCE2|p.I390Tfs*8|1|0.26|ENSG00000163710|chr3:142818414-142818414|A/-|frameshift_variant	21.9598887501803	0.7004979571547932	4				NaN	NaN	0	NaN	6273	3012	9282
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9288	26.072	NaN	3079.5	30	0	1185.5	0.106	+			31345	QISTAVAVLG	10	58	479.7820684079708	957.5495838827417	2	479.7825622558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QISTAVAVLG_	sp|Q6SVZ0|US16_HCMVMProteinUS16OS=Humancytomegalovirus(strainMerlin)OX=295027GN=US16PE=3SV=1	47.657333605630114	0.47858658696240314	4				NaN	NaN	0	NaN	6274	3012	9282
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9289	26.073	NaN	1742.5	30	0	126.13	0.033	+			2226	ALSEKKPT	8	49	437.2552358856546	NaN	0	437.25567626953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ALSEKKPT_	ENSG00000173064|ENST00000682272|HECTD4;HECTD4|p.A4187Pfs*44|1|0.07|ENSG00000173064|chr12:112163201-112163201|C/-|frameshift_variant;nc|ENSG00000173064|Q9Y4D8-4|HECTD4;nc|ENSG00000173064|Q9Y4D8|HECTD4	45.9519527083369	1.7418937515398478	4				NaN	NaN	0	NaN	6275	3012	9282
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9307	26.111	NaN	63071	30	0	33888	0.214	+			30621	QASDVSVKY	9	88	498.7533961769256	995.4922394206512	2	498.753173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QASDVSVKY_	ENSG00000047410|ENST00000367478|TPR;nc|ENSG00000047410|P12270-2|TPR;TPR|p.E1141Dfs*29|1|0.08|ENSG00000047410|chr1:186344085-186344086|-/CAGGTAAA|frameshift_variant;TPR|p.G216Rfs*3|1|0.34|ENSG00000047410|chr1:186362887-186362888|-/T|frameshift_variant;TPR|p.P2083Qfs*3|1|0.31|ENSG00000047410|chr1:186323735-186323735|G/-|frameshift_variant;TPR|p.T2133Lfs*63|1|0.03|ENSG00000047410|chr1:186322382-186322383|-/GTACTAATAAG|frameshift_variant;TPR|p.V1142Efs*26|1|0.08|ENSG00000047410|chr1:186344083-186344084|-/TT|frameshift_variant	112.41091882917199	0.026537921851008135	4				NaN	NaN	0	NaN	6290	3015	9306
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9308	26.114	NaN	16091	30	0	7330.7	0.106				-1	 	0	45	343.88135068587655	1028.6222226578298	3	343.88153076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6291	3015	9306
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9309	26.116	NaN	4411.3	30	0	1192.5	0.106			+	9239	EGTPISCPGI	10	60	487.2360750777892	972.4575972223785	2	487.2362365722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EGTPISCPGI_	REV__tr|U7SSL9|U7SSL9_FUSNUDUF4241domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01311PE=4SV=1	51.33545320467046	0.4446945571623749	4				NaN	NaN	0	NaN	6292	3015	9306
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9310	26.118	NaN	4467.4	30	0	675.32	0.106				-1	 	0	43	335.2055307099103	668.3965084866206	2	335.20556640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6293	3015	9306
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9311	26.12	NaN	6126	30	0	1172.2	0.106	+			50614	YEAAATRL	8	56	447.737326728796	893.460100524392	2	447.7372741699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YEAAATRL_	ENSG00000167004|ENST00000300289|PDIA3;ENST00000434494.5_1_15:44038867-44063413:+|nuORF;ENST00000471856.1_1_1:146649692-146651075:+|nuORF	63.53385203322761	0.46679685265839455	4				NaN	NaN	0	NaN	6294	3015	9306
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9312	26.122	NaN	4053.3	30	0	784.38	0.106			+	17974	IHARLDVD	8	57	469.75575649171935	937.4969600502387	2	469.7558898925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IHARLDVD_	REV__ENST00000520580.5_1_5:65460613-65466462:+|nuORF	42.47446043378293	0.6409579893742323	4				NaN	NaN	0	NaN	6295	3015	9306
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9313	26.124	NaN	4033	30	0	861.14	0.033	+			35338	SAPASQASL	9	47	416.2138114864719	830.4130700397438	2	416.2138977050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SAPASQASL_	ENSG00000137497|ENST00000393695|NUMA1;ENST00000540626.5_1_11:71714575-71718510:-|nuORF;nc|ENSG00000137497|Q14980-2|NUMA1;nc|ENSG00000137497|Q14980-5|NUMA1	85.16082228582465	0.07850854922700509	4				NaN	NaN	0	NaN	6296	3015	9306
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9331	26.161	NaN	37556	30	0	4945.3	0.214				-1	 	0	83	520.2559572350901	1038.4973615369802	2	520.2564086914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6311	3018	9330
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9332	26.165	NaN	6741.9	30	0	2069.1	0.106			+	3496	ASSIPVNYK	9	69	489.76582761294213	977.5171022926843	2	489.7678527832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASSIPVNYK_	REV__ENSG00000114861|ENST00000649528|FOXP1;REV__nc|ENSG00000285708|Q9H334-3|FOXP1;REV__nc|ENSG00000285708|Q9H334-4|FOXP1;REV__nc|ENSG00000285708|Q9H334-6|FOXP1;REV__nc|ENSG00000285708|Q9H334-8|FOXP1	82.24051045832904	0.08786059719216216	4				NaN	NaN	0	NaN	6312	3018	9330
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9333	26.167	NaN	3752.2	30	0	544.47	0.106	+			17819	IEYAKPTRL	9	56	545.8162479141578	1089.6179428951154	2	545.81689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IEYAKPTRL_	ENSG00000104824|ENST00000221419|HNRNPL;HNRNPL|p.P337Hfs*58|9|0.35|ENSG00000104824|chr19:38840319-38840319|G/-|frameshift_variant;HNRNPL|p.P338Tfs*56|1|0.23|ENSG00000104824|chr19:38840318-38840319|-/G|frameshift_variant;nc|ENSG00000104824|P14866-2|HNRNPL	72.2432373244024	0.13108886737667413	4				NaN	NaN	0	NaN	6313	3018	9330
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9334	26.169	NaN	9287.2	30	0	1291.7	0.106	+			8890	EETGAKISV	9	65	467.24772274371253	932.4808925542251	2	467.2478942871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EETGAKISV_	ENSG00000121774|ENST00000327300|KHDRBS1;ENST00000307714.12_1_1:32479575-32503673:+|nuORF;KHDRBS1|p.A312Gfs*56|1|0.28|ENSG00000121774|chr1:32037857-32037858|-/G|frameshift_variant;KHDRBS1|p.P237Hfs*19|1|0.32|ENSG00000121774|chr1:32033269-32033269|C/-|frameshift_variant;KHDRBS1|p.P336Hfs*4|1|0.41|ENSG00000121774|chr1:32037932-32037932|C/-|frameshift_variant;nc|ENSG00000121774|Q07666-2|KHDRBS1	95.81516180277367	0.04847050768394289	4				NaN	NaN	0	NaN	6314	3018	9330
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9335	26.17	NaN	2146.3	30	0	414.13	0.106	+			38061	SPSAGVHTF	9	52	451.72164489850286	901.4287368638057	2	451.7220764160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SPSAGVHTF_	ENSG00000142784|ENST00000319394|WDTC1;ENST00000491239.2_1_1:27614218-27630434:+|nuORF;nc|ENSG00000142784|Q8N5D0-2|WDTC1;nc|ENSG00000142784|Q8N5D0-3|WDTC1;nc|ENSG00000142784|Q8N5D0-4|WDTC1;nc|ENSG00000142784|Q8N5D0-5|WDTC1;nc|ENSG00000142784|Q8N5D0-6|WDTC1;WDTC1|p.E290Nfs*8|3|0.4|ENSG00000142784|chr1:27294617-27294617|G/-|frameshift_variant	73.97473282117947	0.12360187025703594	4				NaN	NaN	0	NaN	6315	3018	9330
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9336	26.172	NaN	2435.7	30	0	294.15	0.035			+	-1	CHALFEHA	8	54	492.7210385318657	983.4275241305314	2	492.7206726074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_C(Carbamidomethyl (C))HALFEHA_	REV__ENSG00000134588|ENST00000511190|USP26;REV__USP26|p.A447Cfs*3|1|0.12|ENSG00000134588|chrX:133026882-133026883|-/A|frameshift_variant	28.2542754592877	0.7411748056684583	4				NaN	NaN	0	NaN	6316	3018	9330
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9337	26.173	NaN	1682.1	30	0	141.35	0.144	+			12248	GATASRLPWKL	11	48	400.5678771719557	1198.681802116067	3	400.5677490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GATASRLPWKL_	ENST00000419804.5_3_X:152937579-152953009:-|nuORF	45.908116695636124	0.4771019740774998	4				NaN	NaN	0	NaN	6317	3018	9330
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9355	26.212	NaN	14874	30	0	5215.7	0.214			+	16772	HNGLATYANG	10	60	509.2402878902819	1016.4660228473638	2	510.2415466308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HNGLATYANG_	REV__ENSG00000121957|ENST00000264126|GPSM2;REV__GPSM2|p.F632Sfs*31|1|0.44|ENSG00000121957|chr1:108929776-108929776|T/-|frameshift_variant	51.33545320467046	0.4446945571623749	4				NaN	NaN	0	NaN	6332	3021	9354
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9356	26.216	NaN	2174.6	30	0	358.66	0.106			+	3663	ASYLQRRR	8	34	350.5377477428326	1048.5914138286978	3	350.53790283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASYLQRRR_	REV__ENSG00000130226|ENST00000377770|DPP6;REV__ENST00000493268.1_1_7:154595624-154650193:+|nuORF;REV__nc|ENSG00000130226|P42658-2|DPP6	24.20275056022122	0.7724576178584145	4				NaN	NaN	0	NaN	6333	3021	9354
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9357	26.218	NaN	1408.3	30	0	180.09	0.106			+	50101	WGRRETKI	8	52	523.2979330928985	NaN	0	523.2980346679688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_WGRRETKI_	REV__ENSG00000147548|ENST00000317025|NSD3;REV__nc|ENSG00000147548|Q9BZ95-2|NSD3;REV__nc|ENSG00000147548|Q9BZ95-4|NSD3;REV__nc|ENSG00000147548|Q9BZ95-5|NSD3	34.172542307311794	1.7418937515398478	4				NaN	NaN	0	NaN	6334	3021	9354
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9358	26.22	NaN	1183.4	30	0	208.12	0.106	+			47769	VSGSSTKW	8	38	426.21539314930885	NaN	0	426.5494689941406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSGSSTKW_	ENSG00000110427|ENST00000658780|KIAA1549L;KIAA1549L|p.T1376Hfs*62|1|0.19|ENSG00000110427|chr11:33606771-33606772|-/C|frameshift_variant;KIAA1549L|p.T1376Pfs*16|1|0.38|ENSG00000110427|chr11:33606772-33606772|C/-|frameshift_variant;nc|ENSG00000110427|Q6ZVL6-2|KIAA1549L;nc|ENSG00000110427|Q6ZVL6|KIAA1549L	25.450171626174864	1.7418937515398478	4				NaN	NaN	0	NaN	6335	3021	9354
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9359	26.221	NaN	1015.4	30	0	103.2	0.032			+	-1	MMKRIQPAAM	10	43	398.20307707121356	NaN	0	398.20263671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_MMKRIQPAAM(Oxidation (M))_	REV__RDH11|p.L28M|1|0.35|ENSG00000072042|chr14:67693045-67693045|G/T|missense_variant	29.170058357718403	0.40439580130713204	4				NaN	NaN	0	NaN	6336	3021	9354
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9377	26.259	NaN	3363.8	30	0	1301.7	0.214	+			44015	TPKNLDYK	8	64	489.76582761294213	977.5171022926843	2	490.2645568847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TPKNLDYK_	ENSG00000159055|ENST00000290130|MIS18A;ENST00000486363.1_1_21:33641984-33642827:-|nuORF	44.116797842482775	0.6307669463330267	4				NaN	NaN	0	NaN	6351	3024	9376
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9378	26.263	NaN	5283.4	30	0	1798.8	0.106	+			23676	LASLLSPGSV	10	60	472.27629333596764	942.5380337387353	2	472.27642822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LASLLSPGSV_	ENSG00000116096|ENST00000234454|SPR;ENST00000498749.1_1_2:73114531-73115553:+|nuORF	49.44154591367651	0.46214596422418036	4				NaN	NaN	0	NaN	6352	3024	9376
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9379	26.265	NaN	5262.3	30	0	777.55	0.106			+	-1	VVALSSCSK	9	72	475.75054670761585	NaN	0	475.75067138671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_VVALSSC(Carbamidomethyl (C))SK_	REV__ENSG00000197472|ENST00000339986|ZNF695	68.78682469695295	0.1118430353446351	4				NaN	NaN	0	NaN	6353	3024	9376
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9380	26.266	NaN	2829	30	0	580.68	0.033	+			24202	LEQTPGVL	8	56	428.7423663933696	NaN	0	428.7427062988281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LEQTPGVL_	ENST00000305623.12_1_10:5319231-5325679:-|nuORF	71.29570347882199	1.7418937515398478	4				NaN	NaN	0	NaN	6354	3024	9376
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9398	26.302	NaN	5933	30	0	2246.1	0.214				-1	STHLLLDFCC	10	45	422.5264822945851	1264.5576174839553	3	422.86077880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_STHLLLDFC(Carbamidomethyl (C))C(Carbamidomethyl (C))_	ENST00000396981.6_1_17:4175707-4175803:-|nuORF	30.317721548370564	0.6322445173429027	4				NaN	NaN	0	NaN	6369	3027	9397
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9399	26.306	NaN	2344.8	30	0	436.37	0.106			+	18147	ILMIQANP	8	53	450.25417112305416	898.4937893129083	2	450.2542724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ILMIQANP_	REV__ENST00000378588.4_1_X:37670194-37670278:+|nuORF	46.76643321282427	0.6143254112625767	4				NaN	NaN	0	NaN	6370	3027	9397
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9400	26.308	NaN	1956	30	0	473.7	0.106	+			16261	HEFHSPAL	8	59	469.2295289408201	936.4445049484402	2	469.22955322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HEFHSPAL_	EHD1|p.E248Rfs*50|1|0.19|ENSG00000110047|chr11:64860098-64860098|G/-|frameshift_variant;EHD3|p.V203Sfs*16|1|0.28|ENSG00000013016|chr2:31260614-31260614|G/-|frameshift_variant;ENSG00000013016|ENST00000322054|EHD3;ENSG00000103966|ENST00000220325|EHD4;ENSG00000110047|ENST00000320631|EHD1;ENST00000569223.1_1_15:42235208-42264692:-|nuORF;nc|ENSG00000013016|Q9NZN3-2|EHD3	45.9519527083369	0.6193794311207887	4				NaN	NaN	0	NaN	6371	3027	9397
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9401	26.31	NaN	2524.2	30	0	445.06	0.106	+			22116	KSNPTFYL	8	54	485.25354800151257	968.4925430698252	2	485.25396728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KSNPTFYL_	ACAD11|p.W537Mfs*57|1|0.25|ENSG00000240303|chr3:132603241-132603242|-/T|frameshift_variant;ENSG00000240303|ENST00000264990|ACAD11;ENST00000469042.5_1_3:132298334-132378619:-|nuORF;ENST00000471702.2_2_3:132339980-132400782:-|nuORF;nc|ENSG00000240303|Q709F0-2|ACAD11	35.200714571348534	0.6875396545722289	4				NaN	NaN	0	NaN	6372	3027	9397
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9402	26.311	NaN	2129	30	0	300.42	0.106			+	-1	KTALRVCNIK	10	41	401.57265371052495	1201.6961317317748	3	401.5730285644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_KTALRVC(Carbamidomethyl (C))NIK_	REV__ENSG00000196090|ENST00000373187|PTPRT;REV__nc|ENSG00000196090|O14522-1|PTPRT;REV__PTPRT|p.P1075Rfs*6|6|0.15|ENSG00000196090|chr20:42110363-42110363|G/-|frameshift_variant;REV__PTPRT|p.S1349Pfs*31|1|0.6|ENSG00000196090|chr20:42084774-42084774|G/-|frameshift_variant	20.83715455343099	0.7096666582730032	4				NaN	NaN	0	NaN	6373	3027	9397
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9403	26.313	NaN	1673.6	30	0	477.9	0.034	+			47892	VSLHLSPR	8	40	454.7686597893095	NaN	0	455.2394714355469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VSLHLSPR_	TLE2|p.Q379Rfs*13|1|0.33|ENSG00000065717|chr19:3009580-3009580|G/-|frameshift_variant	31.954861631926434	1.7418937515398478	4				NaN	NaN	0	NaN	6374	3027	9397
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9404	26.314	NaN	2496.7	30	0	762.17	0.144			+	-1	PCPTKCVCECR	11	52	432.5177303367796	1294.5313616105389	3	432.9284362792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_PCPTKC(Carbamidomethyl (C))VCECR_	REV__ENSG00000165197|ENST00000297904|VEGFD	19.262678746197807	0.7802940895261122	4				NaN	NaN	0	NaN	6375	3027	9397
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9422	26.352	NaN	44311	30	0	24457	0.214			+	8590	ECCHRDLGERG	11	79	444.5246884173633	1330.5522358522899	3	444.5247802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_ECC(Carbamidomethyl (C))HRDLGERG_	REV__ENST00000317025.12_1_8:38129919-38130090:-|nuORF	50.033510581677724	0.4206539900604183	4				NaN	NaN	0	NaN	6390	3030	9421
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9423	26.356	NaN	7850.3	30	0	1103.5	0.106	+			43934	TPAPPTHAL	9	68	452.7477846508936	903.4810163685872	2	452.7477722167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TPAPPTHAL_	ENSG00000165684|ENST00000684778|SNAPC4;SNAPC4|p.E1230Gfs*16|1|0.21|ENSG00000165684|chr9:136378131-136378138|CCTGGGCT/-|frameshift_variant	71.29570347882199	0.13518600952103718	4				NaN	NaN	0	NaN	6391	3030	9421
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9424	26.358	NaN	7754.2	30	0	3746.9	0.106				-1	CLLGCCCWLPA	11	62	432.5177303367796	1294.5313616105389	3	432.5177001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_CLLGC(Carbamidomethyl (C))C(Carbamidomethyl (C))CWLPA_	ENST00000533086.5_1_19:15226645-15227634:-|nuORF;ENST00000534806.1_1_19:15226885-15227589:-|nuORF	20.83715455343099	0.7712264395190968	4				NaN	NaN	0	NaN	6392	3030	9421
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9425	26.36	NaN	15990	30	0	2928.4	0.106	+			2465	APLKSKMIY	9	80	525.8040556581753	1049.5935583831506	2	525.8052978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_APLKSKMIY_	ENSG00000125868|ENST00000246069|DSTN;ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65623104-65623215:-|nuORF;ENST00000602547.1_1_12:6994092-6994545:+|nuORF;nc|ENSG00000125868|P60981-2|DSTN;nc|ENSG00000165410|Q9Y281-3|CFL2	127.46168284122857	0.016682644177004526	4				NaN	NaN	0	NaN	6393	3030	9421
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9426	26.362	NaN	2341.2	30	0	540.46	0.106				-1	EVHLDCLG	8	61	471.72075247065084	941.4269520081017	2	471.7209167480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_EVHLDC(Carbamidomethyl (C))LG_	ENSG00000105656|ENST00000262809|ELL	37.028477286268924	0.6747514403204248	4				NaN	NaN	0	NaN	6394	3030	9421
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9427	26.363	NaN	5192	30	0	860.52	0.034				-1	 	0	61	479.25321225791123	956.4918715826225	2	479.2532043457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6395	3030	9421
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9428	26.364	NaN	3511	30	0	392.1	0.141			+	33683	RNSVEFITK	9	61	547.303829898462	1092.593106863724	2	547.3055419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RNSVEFITK_	REV__tr|U7SWQ9|U7SWQ9_FUSNULipoproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01141PE=4SV=1	77.31757898189308	0.1091473830098891	4				NaN	NaN	0	NaN	6396	3030	9421
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9446	26.403	NaN	3878.7	30	0	470.66	0.214	+			19909	KEFDGKSLVS	10	68	555.2955182958067	1108.5764836584133	2	555.2957763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEFDGKSLVS_	ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;ENST00000517330.1_1_5:77337712-77337985:-|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P;nc|ENSG00000205940|Q58FF8|HSP90AB2P	63.42647028704847	0.33467688528802414	4				NaN	NaN	0	NaN	6411	3033	9445
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9447	26.407	NaN	5121.5	30	0	2748.6	0.106			+	22298	KTEEPVLPEI	10	52	385.54856653142645	1153.6238701944794	3	385.5484619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTEEPVLPEI_	REV__ENSG00000082397|ENST00000341928|EPB41L3;REV__EPB41L3|p.L792Afs*6|1|0.52|ENSG00000082397|chr18:5398120-5398121|-/T|frameshift_variant;REV__nc|ENSG00000082397|Q9Y2J2-4|EPB41L3	30.568863376406313	0.6301935916953115	4				NaN	NaN	0	NaN	6412	3033	9445
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9448	26.409	NaN	3523.3	30	0	482.47	0.106			+	7435	DFEEFAAQLED	11	66	438.5211388361752	1312.5415871087257	3	438.52093505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DFEEFAAQLED_	REV__ENSG00000175544|ENST00000325656|CABP4;REV__ENST00000545777.1_1_11:67223622-67225073:+|nuORF;REV__nc|ENSG00000175544|P57796-2|CABP4	23.37791116691581	0.7445759747191538	4				NaN	NaN	0	NaN	6413	3033	9445
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9449	26.411	NaN	2984.6	30	0	387.59	0.106			+	13225	GIGVSKER	8	52	423.24732010136483	NaN	0	423.2474670410156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GIGVSKER_	REV__tr|U7T5V7|U7T5V7_FUSNUGlutaconyl-CoAdecarboxylasesubunitalphaOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00404PE=4SV=1	38.80614096846853	1.7418937515398478	4				NaN	NaN	0	NaN	6414	3033	9445
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9450	26.412	NaN	2614.1	30	0	260.63	0.106	+			23083	KVVDPFSK	8	65	460.2659712676681	918.5173896021362	2	460.2658996582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KVVDPFSK_	ENSG00000145425|ENST00000274065|RPS3A;ENST00000507485.1_1_4:152020792-152024033:+|nuORF	49.536043120802724	0.597139409391072	4				NaN	NaN	0	NaN	6415	3033	9445
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9451	26.414	NaN	420.32	30	0	54.702	0.106			+	28921	NRASPPSRR	9	23	347.52882621363614	NaN	0	347.5289001464844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NRASPPSRR_	REV__ENSG00000135093|ENST00000257548|USP30	15.641811463095205	0.38404136392510424	4				NaN	NaN	0	NaN	6416	3033	9445
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9452	26.416	NaN	331.13	30	0	28.142	0.037			+	47287	VNELARTVQD	10	23	572.8034952200344	NaN	0	572.802978515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VNELARTVQD_	REV__ENSG00000131495|ENST00000252102|NDUFA2	16.71738777980365	0.4201028297492154	4				NaN	NaN	0	NaN	6417	3033	9445
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9470	26.454	NaN	9066.6	30	0	2227.9	0.214	+			22165	KSSDFAVLK	9	75	497.78175647738186	993.5489600215637	2	497.78173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSSDFAVLK_	ENSG00000103047|ENST00000261778|TANGO6	120.30596017624542	0.02101454110788768	4				NaN	NaN	0	NaN	6432	3036	9469
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9471	26.457	NaN	6203.2	30	0	1566.8	0.106	+			5498	AVADSVLTK	9	64	452.26063646611834	902.5067199990367	2	452.2606201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVADSVLTK_	ENSG00000173821|ENST00000582970|RNF213;ENST00000559070.5_1_17:78261823-78310301:+|nuORF;nc|ENSG00000173821|Q63HN8-4|RNF213;nc|ENSG00000173821|Q63HN8|RNF213;RNF213|p.C5022Lfs*7|1|0.3|ENSG00000173821|chr17:80389237-80389237|G/-|frameshift_variant;RNF213|p.P2167Lfs*64|1|0.09|ENSG00000173821|chr17:80344834-80344835|-/T|frameshift_variant;RNF213|p.Q1953Rfs*50|2|0.13|ENSG00000173821|chr17:80340219-80340219|C/-|frameshift_variant	75.04331003522576	0.118981335847003	4				NaN	NaN	0	NaN	6433	3036	9469
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9472	26.459	NaN	8378.1	30	0	2476.8	0.106	+			19468	KASLGIFSK	9	74	475.7862366804543	949.5579204277086	2	475.78656005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KASLGIFSK_	ENSG00000187950|ENST00000537054|OVCH1;nc|ENSG00000187950|Q7RTY7|OVCH1;OVCH1|p.K1050Nfs*2|1|0.18|ENSG00000187950|chr12:29443368-29443368|T/-|frameshift_variant	117.81106730687013	0.02252488733980868	4				NaN	NaN	0	NaN	6434	3036	9469
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9473	26.461	NaN	2848.4	30	0	569.11	0.106			+	32188	QSTGGAGSPL	10	54	437.71673529461873	873.4189176560375	2	437.7167053222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QSTGGAGSPL_	REV__BBS4|p.E506Vfs*5|1|0.05|ENSG00000140463|chr15:72737544-72737545|AA/-|frameshift_variant;REV__ENSG00000140463|ENST00000268057|BBS4;REV__nc|ENSG00000140463|Q96RK4-2|BBS4;REV__nc|ENSG00000140463|Q96RK4-3|BBS4	67.49366992349736	0.29779660154124327	4				NaN	NaN	0	NaN	6435	3036	9469
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9474	26.463	NaN	4102.7	30	0	1365.1	0.106	+			14973	GTMTGMLYK	9	57	509.2402878902819	1016.4660228473638	2	509.2409362792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_GTM(Oxidation (M))TGMLYK_	ENSG00000178440|ENST00000651763|TIMM23B-AGAP6;ENSG00000204152|ENST00000651259|TIMM23B;ENSG00000265354|ENST00000580018|TIMM23;nc|ENSG00000204152|Q5SRD1-2|TIMM23B	98.62937762414208	0.04060045538121712	4				NaN	NaN	0	NaN	6436	3036	9469
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9475	26.465	NaN	2439.2	30	0	368.8	0.034			+	37778	SLVVTSVME	9	58	482.7529962722938	963.4914396113876	2	483.2507629394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLVVTSVME_	REV__ENST00000398675.7_1_12:42480111-42480195:-|nuORF	37.15910966729921	0.4535818937225704	4				NaN	NaN	0	NaN	6437	3036	9469
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9476	26.465	NaN	3709.6	30	0	1530.3	0.14			+	30420	PWSASPQQL	9	55	507.25611073173724	1012.4976685302745	2	507.25628662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PWSASPQQL_	REV__ENST00000489098.1_1_1:159921578-159923948:-|nuORF	51.33545320467046	0.2872990594074956	4				NaN	NaN	0	NaN	6438	3036	9469
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9494	26.503	NaN	30866	30	0	8079.3	0.214	+			2735	AQYQFTGIKK	10	81	395.2203373955381	1182.6391827868142	3	395.2203674316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AQYQFTGIKK_	ENSG00000173915|ENST00000369815|ATP5MK	60.1669710687717	0.3643216362415131	4				NaN	NaN	0	NaN	6453	3039	9493
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9495	26.507	NaN	22366	30	0	3353.8	0.106	+			22736	KVAVVLIQK	9	78	499.34174923393255	996.6689455346651	2	499.3417053222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVAVVLIQK_	ENSG00000168538|ENST00000334690|TRAPPC11;ENST00000509857.5_1_4:184585182-184595983:+|nuORF;nc|ENSG00000168538|Q7Z392-3|TRAPPC11;nc|ENSG00000168538|Q7Z392-4|TRAPPC11;TRAPPC11|p.T366Pfs*9|1|0.25|ENSG00000168538|chr4:183680246-183680246|A/-|frameshift_variant	141.52041321563706	0.009766778904176347	4				NaN	NaN	0	NaN	6454	3039	9493
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9496	26.509	NaN	11672	30	0	2386.7	0.106	+			35086	SAFSTSISK	9	64	464.24246006067705	926.4703671881541	2	464.2422790527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAFSTSISK_	ENSG00000179115|ENST00000314606|FARSA;ENST00000592662.5_1_19:13039347-13044510:-|nuORF	120.8684288430529	0.02067403653475984	4				NaN	NaN	0	NaN	6455	3039	9493
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9497	26.51	NaN	10346	30	0	5334.1	0.106	+			49282	VVQERESLLVK	11	51	433.9259076032614	1298.7558934099843	3	433.92572021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVQERESLLVK_	ENSG00000096696|ENST00000379802|DSP;nc|ENSG00000096696|P15924-2|DSP;nc|ENSG00000096696|P15924-3|DSP	48.601550744091256	0.44024757269956427	4				NaN	NaN	0	NaN	6456	3039	9493
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9498	26.512	NaN	13556	30	0	2288.3	0.106	+			677	AEAKEKIYL	9	77	532.8028631947457	1063.5911734562912	2	532.803466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEAKEKIYL_	ENSG00000133706|ENST00000394434|LARS1;ENST00000508667.5_1_5:145522961-145531505:-|nuORF;nc|ENSG00000133706|Q9P2J5-2|LARS1	115.49404669440601	0.023927554121326553	4				NaN	NaN	0	NaN	6457	3039	9493
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9499	26.514	NaN	11703	30	0	4845.8	0.106	+			31049	QEVVDGKVV	9	69	486.77145760859827	971.5283622839966	2	486.77154541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QEVVDGKVV_	CON__P35900;ENSG00000171431|ENST00000167588|KRT20;KRT20|p.V404M|1|0.22|ENSG00000171431|chr17:40876426-40876426|C/T|missense_variant	145.15565482312357	0.00806134135205793	4				NaN	NaN	0	NaN	6458	3039	9493
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9500	26.516	NaN	8792.2	30	0	2723.3	0.033	+			40596	SVAGLSVTK	9	61	431.25583131492033	860.4971096966407	2	431.2553405761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVAGLSVTK_	ENSG00000197841|ENST00000492450|ZNF181;ZNF181|p.K248Sfs*36|1|0.29|ENSG00000197841|chr19:34741122-34741125|CAAA/-|frameshift_variant;ZNF181|p.V107Lfs*2|1|0.15|ENSG00000197841|chr19:34740695-34740695|A/-|frameshift_variant;ZNF181|p.Y52H|1|0.07|ENSG00000197841|chr19:34739546-34739546|T/C|missense_variant	61.691277971877994	0.19951612995419254	4				NaN	NaN	0	NaN	6459	3039	9493
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9518	26.553	NaN	20540	30	0	4045.1	0.214	+			33181	REVEARYAL	9	76	553.80135585737	1105.58815878154	2	553.8016357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_REVEARYAL_	ENSG00000111057|ENST00000388835|KRT18;ENST00000411618.1_1_9:30799684-30799825:-|nuORF;ENST00000549078.5_1_12:53344429-53346127:+|nuORF	65.46538089061403	0.16805504838372562	4				NaN	NaN	0	NaN	6474	3042	9517
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9519	26.557	NaN	9174.2	30	0	2915.3	0.106	+			4218	ATGDALLEK	9	70	459.2502213580374	916.4858897828748	2	459.25	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATGDALLEK_	ENSG00000108679|ENST00000262776|LGALS3BP;ENST00000586720.5_1_17:76967660-76975958:-|nuORF;ENST00000587251.5_1_17:76967660-76972124:-|nuORF	146.78539889680295	0.007618400906539062	4				NaN	NaN	0	NaN	6475	3042	9517
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9520	26.559	NaN	6105.9	30	0	798.8	0.106	+			38046	SPQPDGKVVY	10	71	545.2822628578344	1088.5499727824688	2	545.2828369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SPQPDGKVVY_	ENSG00000170892|ENST00000396388|TSEN34	65.15724298150197	0.31893571707528906	4				NaN	NaN	0	NaN	6476	3042	9517
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9521	26.561	NaN	8481.5	30	0	1260.9	0.106			+	36555	SFNTWISQR	9	60	569.7854484170736	1137.556343900947	2	569.7855834960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SFNTWISQR_	REV__ENSG00000167114|ENST00000300456|SLC27A4;REV__SLC27A4|p.L457Cfs*36|2|0.21|ENSG00000167114|chr9:128355093-128355093|C/-|frameshift_variant	66.42927471994793	0.16001998865088202	4				NaN	NaN	0	NaN	6477	3042	9517
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9522	26.563	NaN	3362.9	30	0	975.99	0.106	+			16751	HLQTVRVP	8	53	475.28215539881626	NaN	0	475.2821044921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HLQTVRVP_	ENST00000527238.5_1_11:125109512-125201761:+|nuORF	31.954861631926434	1.7418937515398478	4				NaN	NaN	0	NaN	6478	3042	9517
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9523	26.564	NaN	7198.1	30	0	1754.7	0.033	+			28587	NKKTLSDP	8	66	451.7505328001409	901.4865126670818	2	451.7506408691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NKKTLSDP_	ENSG00000107731|ENST00000335350|UNC5B	87.75429964447693	0.2842685068779738	4				NaN	NaN	0	NaN	6479	3042	9517
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9524	26.565	NaN	6193.3	30	0	932.78	0.138				-1	LVCALTPL	8	66	443.7585117916052	NaN	0	443.75836181640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_LVC(Carbamidomethyl (C))ALTPL_	tr|U7T3C5|U7T3C5_FUSNUDUF819domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00216PE=4SV=1	37.028477286268924	1.7418937515398478	4				NaN	NaN	0	NaN	6480	3042	9517
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9542	26.604	NaN	16935	30	0	6249	0.214			+	36649	SGLPKTKASV	10	45	329.8657455620419	986.5754072863258	3	329.86590576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SGLPKTKASV_	REV__ENSG00000134900|ENST00000376052|TPP2;REV__nc|ENSG00000134900|P29144|TPP2	37.15910966729921	0.575322462179216	4				NaN	NaN	0	NaN	6495	3045	9541
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9543	26.608	NaN	13043	30	0	4947.5	0.106	+			40183	STQTALTLK	9	66	481.77837051337076	961.5421880935415	2	481.7793273925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STQTALTLK_	ENSG00000172123|ENST00000304905|SLFN12;SLFN12|p.V491Cfs*4|1|0.28|ENSG00000172123|chr17:35411605-35411605|T/-|frameshift_variant	182.3913890336628	0.0010559746847940753	4				NaN	NaN	0	NaN	6496	3045	9541
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9544	26.61	NaN	2901.4	30	0	345.46	0.106			+	28015	MWSASILAT	9	59	490.2491837899355	978.483814646671	2	490.2496032714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MWSASILAT_	REV__ENSG00000176200|ENST00000313253|OR4D11	31.954861631926434	0.5046124803899898	4				NaN	NaN	0	NaN	6497	3045	9541
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9545	26.612	NaN	4579	30	0	2591.5	0.106				-1	SVLQVMGKKG	10	41	354.87041849413714	1061.5894260826115	3	354.8707275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_SVLQVM(Oxidation (M))GKKG_	ENST00000429810.2_1_16:74382766-74394769:-|nuORF;ENST00000566802.5_1_16:74382766-74386124:-|nuORF	28.081489160057373	0.6505064946289502	4				NaN	NaN	0	NaN	6498	3045	9541
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9546	26.613	NaN	2083.7	30	0	188.05	0.106			+	45779	VAGDLKKL	8	52	422.26828414209916	NaN	0	422.26837158203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VAGDLKKL_	REV__tr|U7T5I8|U7T5I8_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00072PE=4SV=1	52.29916861842294	1.7418937515398478	4				NaN	NaN	0	NaN	6499	3045	9541
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9547	26.615	NaN	2226.4	30	0	289.83	0.035	+			33422	RIIDVSTVK	9	62	515.8161479451886	1029.6177429571771	2	515.816650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RIIDVSTVK_	ENSG00000076043|ENST00000265881|REXO2;ENST00000538403.5_1_11:114314877-114320694:+|nuORF;ENST00000538791.3_1_11:114315223-114320694:+|nuORF;ENST00000539333.5_1_11:114316741-114316810:+|nuORF;ENST00000539788.5_1_11:114314891-114320694:+|nuORF;ENST00000543131.5_1_11:114310234-114320694:+|nuORF;nc|ENSG00000076043|Q9Y3B8-2|REXO2;nc|ENSG00000076043|Q9Y3B8-3|REXO2;REXO2|p.I219Nfs*3|1|0.39|ENSG00000076043|chr11:114449909-114449910|-/A|frameshift_variant	40.05817265558897	0.419577045485086	4				NaN	NaN	0	NaN	6500	3045	9541
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9548	26.616	NaN	1626.4	30	0	143.01	0.138				-1	LCAAAGYAL	9	44	455.2283630371094	NaN	0	455.2283630371094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_LC(Carbamidomethyl (C))AAAGYAL_	ENST00000371953.7_1_10:89623315-89623411:+|nuORF	49.21078951299608	0.21213183292994464	4				NaN	NaN	0	NaN	6501	3045	9541
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9566	26.654	NaN	10944	30	0	4868.9	0.214	+			47357	VPEEKAAEL	9	72	493.26338728758816	984.5122216419763	2	493.2634582519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VPEEKAAEL_	ENSG00000036054|ENST00000394144|TBC1D23;ENST00000484231.1_1_3:99998514-100002656:+|nuORF;ENST00000486274.5_1_3:99980342-100042509:+|nuORF;nc|ENSG00000036054|Q9NUY8-2|TBC1D23;TBC1D23|p.A351Ifs*23|1|0.05|ENSG00000036054|chr3:100299289-100299290|-/ATTCACA|frameshift_variant	54.722347961057174	0.257609425301511	4				NaN	NaN	0	NaN	6516	3048	9565
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9567	26.657	NaN	5213.7	30	0	3978.4	0.106				-1	 	0	31	322.19350053372375	642.3724481342475	2	322.1935119628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6517	3048	9565
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9568	26.66	NaN	3703	30	0	1243.2	0.106	+			31032	QEVAIKQM	8	56	473.7549537421752	945.4953545511504	2	473.7550354003906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QEVAIKQM_	ENSG00000077264|ENST00000372007|PAK3;ENSG00000149269|ENST00000356341|PAK1;nc|ENSG00000077264|O75914-3|PAK3;nc|ENSG00000077264|O75914-4|PAK3;nc|ENSG00000077264|O75914|PAK3;nc|ENSG00000149269|Q13153-2|PAK1	69.6276240434122	0.4100012001731381	4				NaN	NaN	0	NaN	6518	3048	9565
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9569	26.661	NaN	13391	30	0	6842.1	0.106	+			21282	KLQKAVSEE	9	69	516.2899271193045	1030.5653013054089	2	516.2900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KLQKAVSEE_	AKAP9|p.L1203Yfs*16|1|0.24|ENSG00000127914|chr7:92014319-92014319|T/-|frameshift_variant;AKAP9|p.Q3083Nfs*28|1|0.15|ENSG00000127914|chr7:92089389-92089390|-/TGAATATCAAGCAGCTATGGAATGCC|frameshift_variant;AKAP9|p.T1942Lfs*3|3|0.18|ENSG00000127914|chr7:92062328-92062328|A/-|frameshift_variant;ENSG00000127914|ENST00000356239|AKAP9;ENST00000493453.1_1_7:91570251-91670224:+|nuORF;nc|ENSG00000127914|Q99996-1|AKAP9;nc|ENSG00000127914|Q99996-3|AKAP9;nc|ENSG00000127914|Q99996-4|AKAP9;nc|ENSG00000127914|Q99996-5|AKAP9;nc|ENSG00000127914|Q99996-6|AKAP9	68.78682469695295	0.14603441672067394	4				NaN	NaN	0	NaN	6519	3048	9565
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9570	26.663	NaN	6515.9	30	0	2200.4	0.106	+			44753	TTMTGTVLK	9	63	476.26152213027643	950.5084913273529	2	476.26214599609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TTMTGTVLK_	ENSG00000167323|ENST00000526596|STIM1;ENST00000533445.1_1_11:4076769-4103426:+|nuORF;nc|ENSG00000167323|Q13586-2|STIM1;nc|ENSG00000167323|Q13586|STIM1	107.00750918261382	0.032051501805654005	4				NaN	NaN	0	NaN	6520	3048	9565
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9571	26.665	NaN	2209.4	30	0	378.59	0.034	+			19794	KEARDKIL	8	62	486.7947659194145	971.574978905629	2	486.7947082519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KEARDKIL_	tr|U7SFS1|U7SFS1_FUSNUCytokininriboside5'-monophosphatephosphoribohydrolaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02213PE=3SV=1	47.657333605630114	0.6087971902037268	4				NaN	NaN	0	NaN	6521	3048	9565
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9572	26.666	NaN	4034.2	30	0	742.88	0.144	+			15134	GTSDRFSRILK	11	47	427.24201608898215	1278.7042188671464	3	427.24188232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GTSDRFSRILK_	ENSG00000014138|ENST00000265465|POLA2;ENST00000527850.5_1_11:65029833-65063521:+|nuORF;ENST00000534785.1_1_11:65061654-65063444:+|nuORF;nc|ENSG00000014138|Q14181-2|POLA2	41.080066990542036	0.5431644350485484	4				NaN	NaN	0	NaN	6522	3048	9565
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9590	26.704	NaN	5983	30	0	2064.6	0.214			+	25459	LPQLGSPH	8	62	424.7347573541999	847.4549617751999	2	424.7346496582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LPQLGSPH_	REV__TLE4|p.P158L|1|0.27|ENSG00000106829|chr9:79652675-79652675|C/T|missense_variant	94.00642277110589	0.2653416297186628	4				NaN	NaN	0	NaN	6537	3051	9589
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9591	26.708	NaN	9261	30	0	2254.5	0.106			+	-1	GVIFTMACAF	10	50	372.84529602513305	1115.5140586755992	3	372.8453674316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GVIFTMAC(Carbamidomethyl (C))AF_	REV__ENST00000355621.7_1_7:129472697-129472748:-|nuORF	30.317721548370564	0.6322445173429027	4				NaN	NaN	0	NaN	6538	3051	9589
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9592	26.71	NaN	2030.2	30	0	310.32	0.106			+	19836	KEECVIHTV	9	62	529.2709961705656	NaN	0	529.2708740234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEECVIHTV_	REV__nc|ENSG00000198022|A6NJ88|SAGE2P	93.19546047674547	0.03515475374905802	4				NaN	NaN	0	NaN	6539	3051	9589
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9593	26.712	NaN	1689.1	30	0	242.89	0.106			+	50257	WPVFDGAK	8	54	460.236022059688	918.4574911861761	2	460.23583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_WPVFDGAK_	REV__SETMAR|p.F116Lfs*58|1|0.35|ENSG00000170364|chr3:4313085-4313085|T/-|frameshift_variant	37.15910966729921	0.6739408393984688	4				NaN	NaN	0	NaN	6540	3051	9589
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9594	26.713	NaN	1312.4	30	0	459.06	0.106			+	49229	VVNKKKKK	8	24	324.56111759377245	NaN	0	324.56109619140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVNKKKKK_	REV__ENST00000503238.5_2_4:48500063-48500156:-|nuORF	18.324413293986947	1.7418937515398478	4				NaN	NaN	0	NaN	6541	3051	9589
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9595	26.715	NaN	3477.8	30	0	671.43	0.106	+			48252	VTDGAILGK	9	65	437.25536773248916	872.4961825317783	2	437.2552490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTDGAILGK_	ENSG00000055609|ENST00000262189|KMT2C;KMT2C|p.F4496Lfs*21|3|0.28|ENSG00000055609|chr7:152148439-152148439|A/-|frameshift_variant;KMT2C|p.I4868Lfs*37|1|0.28|ENSG00000055609|chr7:152138837-152138837|T/-|frameshift_variant;KMT2C|p.K2867Dfs*7|1|0.28|ENSG00000055609|chr7:152176853-152176854|TT/-|frameshift_variant;KMT2C|p.P2292Hfs*13|1|0.25|ENSG00000055609|chr7:152180985-152180985|G/-|frameshift_variant;KMT2C|p.S2816Ifs*6|1|0.44|ENSG00000055609|chr7:152177007-152177008|-/T|frameshift_variant;KMT2C|p.T3715Qfs*4|1|0.34|ENSG00000055609|chr7:152162434-152162434|T/-|frameshift_variant;nc|ENSG00000055609|Q8NEZ4-2|KMT2C;nc|ENSG00000055609|Q8NEZ4-3|KMT2C	37.81151784470057	0.4459294069877048	4				NaN	NaN	0	NaN	6542	3051	9589
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9596	26.717	NaN	1750.1	30	0	277.82	0.033	+			12136	GAHRILPV	8	50	431.76648976844535	NaN	0	431.7662658691406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GAHRILPV_	ENST00000484003.1_1_6:32810810-32812071:-|nuORF	19.359975847455235	1.7418937515398478	4				NaN	NaN	0	NaN	6543	3051	9589
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9614	26.755	NaN	14343	30	0	4970.7	0.215	+			5032	ATSEIFASK	9	68	477.25028331393935	952.4860136946787	2	477.2500915527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSEIFASK_	ENSG00000005810|ENST00000544440|MYCBP2;MYCBP2|p.C1064Ifs*31|1|0.09|ENSG00000005810|chr13:77211267-77211279|TTATCAGAAGGCA/-|frameshift_variant;MYCBP2|p.N1867Tfs*9|1|0.15|ENSG00000005810|chr13:77171572-77171572|T/-|frameshift_variant;MYCBP2|p.N3049*|1|0.11|ENSG00000005810|chr13:77097894-77097895|TT/-|frameshift_variant;MYCBP2|p.P4047Qfs*26|2|0.35|ENSG00000005810|chr13:77067782-77067782|G/-|frameshift_variant;MYCBP2|p.T1507Ffs*24|1|0.04|ENSG00000005810|chr13:77185189-77185190|-/TTGTAAA|frameshift_variant;MYCBP2|p.T4311Pfs*37|1|0.14|ENSG00000005810|chr13:77059619-77059619|G/-|frameshift_variant;MYCBP2|p.V3749*|1|0.12|ENSG00000005810|chr13:77081486-77081486|C/-|frameshift_variant;nc|ENSG00000005810|O75592-2|MYCBP2	209.1949250693894	5.5435209957013866E-08	4				NaN	NaN	0	NaN	6558	3054	9613
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9615	26.758	NaN	19758	30	0	2223.1	0.106	+			42372	TAINASRAL	9	67	458.76402903860844	915.5135051440169	2	458.7637023925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAINASRAL_	ENSG00000174373|ENST00000680220|RALGAPA1;ENST00000443361.1_1_9:108287470-108288637:+|nuORF;nc|ENSG00000174373|Q6GYQ0-2|RALGAPA1;nc|ENSG00000174373|Q6GYQ0-5|RALGAPA1;nc|ENSG00000174373|Q6GYQ0-6|RALGAPA1;nc|ENSG00000174373|Q6GYQ0-7|RALGAPA1;nc|ENSG00000174373|Q6GYQ0|RALGAPA1	128.60217544463768	0.015992218256422188	4				NaN	NaN	0	NaN	6559	3054	9613
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9616	26.76	NaN	5350.2	30	0	666.26	0.106	+			34061	RSMVSTIMK	9	76	526.7829982209985	1051.5514435087969	2	526.7838745117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RSMVSTIMK_	BIRC6|p.K3585Sfs*8|1|0.32|ENSG00000115760|chr2:32515171-32515171|A/-|frameshift_variant;BIRC6|p.S3504Mfs*5|1|0.15|ENSG00000115760|chr2:32513095-32513098|TAGT/-|frameshift_variant;ENSG00000115760|ENST00000421745|BIRC6;ENST00000497023.1_1_2:32727936-32730277:+|nuORF	81.52500206392136	0.09095445986635249	4				NaN	NaN	0	NaN	6560	3054	9613
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9617	26.762	NaN	6525.2	30	0	741.2	0.106	+			19621	KDIDIHEV	8	67	484.7556915636342	967.4968301940684	2	484.7555236816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KDIDIHEV_	ENSG00000153187|ENST00000640218|HNRNPU;nc|ENSG00000153187|Q00839-2|HNRNPU	71.87747018426188	0.391254423828572	4				NaN	NaN	0	NaN	6561	3054	9613
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9618	26.764	NaN	9953	30	0	3062.1	0.106	+			8545	EAVKPTVGM	9	66	466.24918800288157	930.4838230725632	2	466.2490539550781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EAVKPTVGM_	ENSG00000164323|ENST00000458385|CFAP97	131.03138772384656	0.014687601201650916	4				NaN	NaN	0	NaN	6562	3054	9613
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9619	26.766	NaN	3557.5	30	0	501.64	0.106	+			41694	SVSDLAPPR	9	57	471.255749602876	940.496946272552	2	471.2555236816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVSDLAPPR_	ENSG00000166295|ENST00000299381|ANAPC16	82.24051045832904	0.08786059719216216	4				NaN	NaN	0	NaN	6563	3054	9613
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9620	26.767	NaN	1954.3	30	0	180.98	0.035	+			2466	APLKSKMIY	9	60	525.8040556581753	1049.5935583831506	2	525.8040161132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_APLKSKMIY_	ENSG00000125868|ENST00000246069|DSTN;ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65623104-65623215:-|nuORF;ENST00000602547.1_1_12:6994092-6994545:+|nuORF;nc|ENSG00000125868|P60981-2|DSTN;nc|ENSG00000165410|Q9Y281-3|CFL2	62.107414245175825	0.1960472003779324	4				NaN	NaN	0	NaN	6564	3054	9613
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9638	26.805	NaN	97612	30	0	12117	0.214	+			50509	YANSKAVTL	9	94	483.7660479377956	965.5175429423912	2	483.7661437988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YANSKAVTL_	ENSG00000164091|ENST00000296490|WDR82;ENST00000487402.1_1_3:52291508-52301068:-|nuORF	168.25843898104137	0.0030641937004078144	4				NaN	NaN	0	NaN	6579	3057	9637
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9639	26.809	NaN	4095.4	30	0	1042	0.106	+			49425	VVVDEAIQK	9	61	500.78724487902883	999.5599368248577	2	500.7872009277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVVDEAIQK_	ENSG00000139631|ENST00000444623|CSAD;nc|ENSG00000139631|Q9Y600-2|CSAD;nc|ENSG00000139631|Q9Y600-3|CSAD	101.25262130126117	0.03792372629710479	4				NaN	NaN	0	NaN	6580	3057	9637
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9640	26.811	NaN	4534.9	30	0	737.99	0.106	+			44323	TSFRDTSL	8	56	463.7320563196134	925.4495597060268	2	463.73211669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TSFRDTSL_	ENSG00000204764|ENST00000523189|RANBP17;ENST00000443155.5_1_5:170288887-170338173:+|nuORF;ENST00000519130.5_1_5:170289037-170336799:+|nuORF;nc|ENSG00000204764|Q9H2T7-2|RANBP17;RANBP17|p.N641Tfs*35|2|0.1|ENSG00000204764|chr5:171183218-171183218|A/-|frameshift_variant	73.97473282117947	0.3737790450121076	4				NaN	NaN	0	NaN	6581	3057	9637
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9641	26.812	NaN	3978.4	30	0	758.37	0.106	+			10379	EVAKVIVSM	9	67	496.2783136572151	990.5420743812302	2	496.2783508300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_EVAKVIVSM(Oxidation (M))_	AKAP9|p.Q3083Nfs*28|1|0.15|ENSG00000127914|chr7:92089389-92089390|-/TGAATATCAAGCAGCTATGGAATGCC|frameshift_variant;AKAP9|p.T1942Lfs*3|3|0.18|ENSG00000127914|chr7:92062328-92062328|A/-|frameshift_variant;ENSG00000127914|ENST00000356239|AKAP9;ENST00000493453.1_1_7:91570251-91670224:+|nuORF;nc|ENSG00000127914|Q99996-1|AKAP9;nc|ENSG00000127914|Q99996-3|AKAP9;nc|ENSG00000127914|Q99996-4|AKAP9;nc|ENSG00000127914|Q99996-5|AKAP9;nc|ENSG00000127914|Q99996-6|AKAP9	104.74654710444128	0.034358562718640136	4				NaN	NaN	0	NaN	6582	3057	9637
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9642	26.814	NaN	4736	30	0	635.63	0.106			+	32019	QRLYLVKG	8	72	488.80026542999406	975.5859779267881	2	488.80047607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QRLYLVKG_	REV__CAPN12|p.E213K|1|0.54|ENSG00000182472|chr19:38740143-38740143|C/T|missense_variant	60.29395666154354	0.49887135096048313	4				NaN	NaN	0	NaN	6583	3057	9637
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9643	26.816	NaN	2306.2	30	0	476.88	0.106				-1	GTFGTFMAIG	10	55	509.2402878902819	1016.4660228473638	2	509.2405090332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_GTFGTFM(Oxidation (M))AIG_	ENSG00000125995|ENST00000374077|ROMO1;ENST00000374072.5_1_20:34287595-34288825:+|nuORF	34.172542307311794	0.6007644933930345	4				NaN	NaN	0	NaN	6584	3057	9637
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9644	26.818	NaN	1033.9	30	0	652.99	0.03				-1	 	0	27	329.18306999028243	656.3515870473649	2	329.18310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6585	3057	9637
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9662	26.855	NaN	39178	30	0	12607	0.215	+			15138	GTSEFITGK	9	70	470.2424961779823	938.4704394227646	2	470.24237060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTSEFITGK_	ENSG00000110002|ENST00000456829|VWA5A;VWA5A|p.D571Mfs*3|1|0.56|ENSG00000110002|chr11:124137094-124137094|A/-|frameshift_variant	154.1183686248401	0.005909203230691971	4				NaN	NaN	0	NaN	6600	3060	9661
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9663	26.859	NaN	11654	30	0	2860.4	0.106	+			38220	SQGTPISLK	9	75	465.7661162326866	929.5176795321732	2	465.76580810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SQGTPISLK_	ENSG00000167670|ENST00000301280|CHAF1A	106.68306549817024	0.032382560583716295	4				NaN	NaN	0	NaN	6601	3060	9661
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9664	26.861	NaN	2585.8	30	0	269.45	0.106	+			19239	KAARETKIL	9	72	515.3254365166011	1028.6363201000022	2	515.325927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KAARETKIL_	ENSG00000113643|ENST00000231572|RARS1;nc|ENSG00000113643|P54136-2|RARS1	47.657333605630114	0.33044192980041115	4				NaN	NaN	0	NaN	6602	3060	9661
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9665	26.863	NaN	2491.3	30	0	244.63	0.106	+			21443	KNDIRVEIV	9	60	543.3189899916606	1084.623427050121	2	543.3200073242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KNDIRVEIV_	ENSG00000149571|ENST00000525144|KIRREL3	69.6276240434122	0.14239879520340665	4				NaN	NaN	0	NaN	6603	3060	9661
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9666	26.864	NaN	10251	30	0	6392.5	0.106	+			28522	NIEFITAGG	9	66	461.23723132839206	920.4599097235841	2	461.2372741699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NIEFITAGG_	ENSG00000145555|ENST00000513610|MYO10;MYO10|p.G1223Rfs*28|1|0.25|ENSG00000145555|chr5:16694504-16694505|-/T|frameshift_variant;MYO10|p.I417Tfs*39|1|0.05|ENSG00000145555|chr5:16764326-16764327|-/ACAAATCTCTG|frameshift_variant;MYO10|p.N507Qfs*30|1|0.11|ENSG00000145555|chr5:16762613-16762614|-/TG|frameshift_variant;MYO10|p.S468Ffs*8|1|0.05|ENSG00000145555|chr5:16763679-16763680|-/A|frameshift_variant	69.6276240434122	0.14239879520340665	4				NaN	NaN	0	NaN	6604	3060	9661
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9667	26.866	NaN	1626.5	30	0	418.14	0.036			+	-1	ATGVRMIKF	9	27	346.8633728027344	NaN	0	346.8633728027344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_ATGVRM(Oxidation (M))IKF_	REV__ENSG00000125124|ENST00000245157|BBS2	32.81241826257853	0.3119040447479903	4				NaN	NaN	0	NaN	6605	3060	9661
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9668	26.867	NaN	2208.4	30	0	394.85	0.14				-1	INKAWVCD	8	58	503.2459132139653	NaN	0	503.24591064453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_INKAWVC(Carbamidomethyl (C))D_	ENSG00000168702|ENST00000389484|LRP1B;LRP1B|p.C2682Vfs*15|1|0.3|ENSG00000168702|chr2:140516994-140516994|A/-|frameshift_variant;LRP1B|p.C3762Lfs*2|1|0.32|ENSG00000168702|chr2:140358089-140358090|-/A|frameshift_variant;LRP1B|p.G4130Mfs*20|1|0.06|ENSG00000168702|chr2:140324019-140324020|-/AT|frameshift_variant;LRP1B|p.H4368Tfs*4|1|0.47|ENSG00000168702|chr2:140274465-140274465|C/-|frameshift_variant;LRP1B|p.I3028Nfs*2|1|0.39|ENSG00000168702|chr2:140492645-140492646|-/T|frameshift_variant;LRP1B|p.K2543Nfs*42|1|0.08|ENSG00000168702|chr2:140536594-140536594|T/-|frameshift_variant;LRP1B|p.N3100Kfs*6|1|0.21|ENSG00000168702|chr2:140485468-140485469|-/T|frameshift_variant;LRP1B|p.N3434Tfs*84|1|0.47|ENSG00000168702|chr2:140442617-140442617|T/-|frameshift_variant;LRP1B|p.N4135Mfs*14|1|0.13|ENSG00000168702|chr2:140324003-140324003|T/-|frameshift_variant;LRP1B|p.R3957Kfs*11|2|0.15|ENSG00000168702|chr2:140350819-140350820|-/T|frameshift_variant;LRP1B|p.T2640Pfs*5|1|0.12|ENSG00000168702|chr2:140525952-140525952|T/-|frameshift_variant;LRP1B|p.Y3120*|1|0.16|ENSG00000168702|chr2:140485402-140485408|AGTAGGG/-|frameshift_variant	65.80317337860623	1.7418937515398478	4				NaN	NaN	0	NaN	6606	3060	9661
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9686	26.904	NaN	5974.1	30	0	1247.8	0.214	+			30668	QAVQDNPAM	9	68	487.2237020527287	972.4328511722574	2	487.2236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QAVQDNPAM_	CARD17-CASP1|1|fusion;CARD17-CASP1|2|fusion;CARD17-CASP1|3|fusion;CARD17-CASP1|4|fusion;CASP1|p.N205Ifs*7|1|0.4|ENSG00000137752|chr11:105030343-105030343|T/-|frameshift_variant;CASP1|p.P124S|1|0.4|ENSG00000137752|chr11:105031248-105031248|G/A|missense_variant;ENSG00000137752|ENST00000533400|CASP1;ENST00000526511.5_1_11:104901858-104905840:-|nuORF;ENST00000528424.1_1_11:104901858-104905058:-|nuORF;nc|ENSG00000137752|P29466-2|CASP1;nc|ENSG00000137752|P29466-3|CASP1;nc|ENSG00000137752|P29466-4|CASP1;nc|ENSG00000204397|Q5EG05|CARD16	54.776311868738084	0.25715957988447635	4				NaN	NaN	0	NaN	6621	3063	9685
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9687	26.908	NaN	4659.7	30	0	1702	0.106	+			29385	PAPAPAPAPD	10	63	452.23178095113013	902.4490089690603	2	452.23138427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PAPAPAPAPD_	ENSG00000129757|ENST00000440480|CDKN1C;nc|ENSG00000129757|P49918|CDKN1C	37.15910966729921	0.575322462179216	4				NaN	NaN	0	NaN	6622	3063	9685
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9688	26.91	NaN	3422.4	30	0	842.07	0.106	+			32666	RAASPGPSWEA	11	48	376.85240099725144	1127.5353735919543	3	376.8524475097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RAASPGPSWEA_	ENSG00000183317|ENST00000373048|EPHA10;ENST00000446149.6_1_1:38181546-38201012:-|nuORF;EPHA10|p.R869Gfs*10|1|0.12|ENSG00000183317|chr1:37719566-37719566|G/-|frameshift_variant;nc|ENSG00000183317|Q5JZY3-3|EPHA10	21.780426970141523	0.7613322811393133	4				NaN	NaN	0	NaN	6623	3063	9685
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9689	26.912	NaN	4366	30	0	2541.5	0.106	+			17163	HTISPFMNK	9	64	537.7730786834364	1073.5316044336728	2	537.773681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HTISPFMNK_	ENSG00000101294|ENST00000398174|HM13;ENST00000492709.5_1_20:30126008-30136787:+|nuORF;nc|ENSG00000101294|Q8TCT9-4|HM13;nc|ENSG00000101294|Q8TCT9-5|HM13;nc|ENSG00000101294|Q8TCT9|HM13	67.49366992349736	0.1516260258713357	4				NaN	NaN	0	NaN	6624	3063	9685
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9690	26.913	NaN	4385.9	30	0	564.98	0.106	+			34609	RVPLAIVNK	9	78	505.32930339558766	1008.6440538579753	2	505.3294677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RVPLAIVNK_	DYNC1H1|p.F2635Lfs*67|1|0.16|ENSG00000197102|chr14:102017141-102017141|T/-|frameshift_variant;DYNC1H1|p.G1902Vfs*27|2|0.27|ENSG00000197102|chr14:102006154-102006154|G/-|frameshift_variant;DYNC1H1|p.K3112Hfs*3|1|0.31|ENSG00000197102|chr14:102027998-102027999|-/TCACAAG|frameshift_variant;DYNC1H1|p.W4201Gfs*43|1|0.42|ENSG00000197102|chr14:102043958-102043958|G/-|frameshift_variant;ENSG00000197102|ENST00000360184|DYNC1H1	101.60071028292904	0.0375685401170269	4				NaN	NaN	0	NaN	6625	3063	9685
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9691	26.915	NaN	3523.8	30	0	372.87	0.106			+	36906	SIIDATKK	8	59	438.26322593857196	874.511898943944	2	438.2630615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SIIDATKK_	REV__ENSG00000132972|ENST00000255324|RNF17;REV__nc|ENSG00000132972|Q9BXT8-4|RNF17;REV__nc|ENSG00000132972|Q9BXT8-5|RNF17;REV__RNF17|p.C1288Vfs*21|1|0.1|ENSG00000132972|chr13:24861352-24861352|T/-|frameshift_variant	34.172542307311794	0.6954784234644539	4				NaN	NaN	0	NaN	6626	3063	9685
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9692	26.917	NaN	12180	30	0	4836.4	0.037				-1	GTLMWHQMK	9	61	383.1840513554645	1146.5303246665935	3	383.1845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_GTLM(Oxidation (M))WHQMK_	ENST00000346169.6_1_3:184032401-184033585:+|nuORF;ENST00000352767.7_2_3:184032446-184033585:+|nuORF	45.97224482568171	0.3502073465782774	4				NaN	NaN	0	NaN	6627	3063	9685
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9710	26.955	NaN	6183.2	30	0	578.15	0.215	+			40589	SVAGLCAIGPS	11	69	487.7521670971549	973.4897812611098	2	487.7522277832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVAGLCAIGPS_	ENSG00000015532|ENST00000017003|XYLT2;ENST00000571021.1_1_17:48437265-48437649:+|nuORF	77.31757898189308	0.17473537675624723	4				NaN	NaN	0	NaN	6642	3066	9709
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9711	26.958	NaN	3698.5	30	0	590.94	0.106	+			14049	GSIDAITGK	9	53	431.2375627787748	860.4605726243497	2	431.2372131347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSIDAITGK_	ENSG00000004399|ENST00000324093|PLXND1;nc|ENSG00000004399|Q9Y4D7-2|PLXND1;PLXND1|p.P1734Hfs*40|1|0.26|ENSG00000004399|chr3:129559716-129559716|G/-|frameshift_variant;PLXND1|p.T1897Rfs*17|1|0.06|ENSG00000004399|chr3:129556402-129556402|G/-|frameshift_variant	101.25262130126117	0.03792372629710479	4				NaN	NaN	0	NaN	6643	3066	9709
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9712	26.96	NaN	1666.3	30	0	913.55	0.106	+			24604	LGRELLRLA	9	26	347.5571643148729	1039.6496635448188	3	347.55718994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LGRELLRLA_	ENSG00000215045|ENST00000457091|GRID2IP;GRID2IP|p.L1003Cfs*46|1|0.47|ENSG00000215045|chr7:6503063-6503063|A/-|frameshift_variant;GRID2IP|p.P751Hfs*78|1|0.38|ENSG00000215045|chr7:6508277-6508277|G/-|frameshift_variant;GRID2IP|p.S1123Lfs*62|1|0.41|ENSG00000215045|chr7:6501814-6501814|G/-|frameshift_variant	20.94693142431847	0.6074874384046576	4				NaN	NaN	0	NaN	6644	3066	9709
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9713	26.962	NaN	791.57	30	0	272.09	0.106				-1	 	0	29	322.19350053372375	642.3724481342475	2	322.2117614746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6645	3066	9709
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9714	26.964	NaN	1220.6	30	0	107.21	0.106	+			33707	RPESFFQQ	8	55	519.7518920898438	NaN	0	519.7518920898438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RPESFFQQ_	ENSG00000127564|ENST00000262300|PKMYT1;nc|ENSG00000127564|Q99640-2|PKMYT1;nc|ENSG00000127564|Q99640-3|PKMYT1;nc|ENSG00000127564|Q99640-4|PKMYT1	30.503639358989545	1.7418937515398478	4				NaN	NaN	0	NaN	6646	3066	9709
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9715	26.966	NaN	843.66	30	0	371.84	0.106	+			9463	EKNRGRLI	8	28	329.20128265637715	NaN	0	329.2013244628906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EKNRGRLI_	ENSG00000036448|ENST00000262113|MYOM2;ENST00000520779.1_1_8:2088796-2113099:+|nuORF	21.9598887501803	1.7418937515398478	4				NaN	NaN	0	NaN	6647	3066	9709
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9716	26.967	NaN	1605	30	0	156.91	0.035	+			51172	YPGCTKVY	8	62	494.2335197743142	986.4524866154284	2	494.23345947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_YPGC(Carbamidomethyl (C))TKVY_	ENSG00000102554|ENST00000377687|KLF5;nc|ENSG00000102554|Q13887-2|KLF5;nc|ENSG00000102554|Q13887-4|KLF5	63.30626980617807	0.4690498839812213	4				NaN	NaN	0	NaN	6648	3066	9709
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9734	27.003	NaN	15929	30	0	2770.2	0.214	+			27528	MPADTNKAF	9	72	497.73653740769777	993.4585218821956	2	497.73675537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MPADTNKAF_	ENSG00000125037|ENST00000245046|EMC3;ENST00000487465.5_1_3:10011273-10028351:-|nuORF;nc|ENSG00000125037|Q9P0I2-2|EMC3	90.60085204095205	0.06317133949006545	4				NaN	NaN	0	NaN	6663	3069	9733
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9735	27.007	NaN	6761.7	30	0	1737	0.106	+			5627	AVCYQAITK	9	63	527.2738101599194	1052.5330673866388	2	527.2743530273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_AVC(Carbamidomethyl (C))YQAITK_	ENSG00000140632|ENST00000321919|GLYR1;nc|ENSG00000140632|Q49A26-3|GLYR1;nc|ENSG00000140632|Q49A26-4|GLYR1;nc|ENSG00000140632|Q49A26-5|GLYR1	112.41091882917199	0.026537921851008135	4				NaN	NaN	0	NaN	6664	3069	9733
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9736	27.009	NaN	2343.1	30	0	273.8	0.106			+	-1	KQHRCDVQT	9	61	586.2860557159605	1170.557558498721	2	586.2871704101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_KQHRC(Carbamidomethyl (C))DVQT_	REV__ENST00000559664.5_1_15:34629408-34629573:-|nuORF	51.19269402634007	0.2889735674168909	4				NaN	NaN	0	NaN	6665	3069	9733
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9737	27.011	NaN	2249.7	30	0	254.96	0.106	+			17515	IDKTTAAF	8	53	433.73459454117835	865.4546361491567	2	433.7347412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IDKTTAAF_	ENSG00000124562|ENST00000244520|SNRPC;ENST00000474635.1_2_6:34730443-34740721:+|nuORF	82.30502934623384	0.30436709589983096	4				NaN	NaN	0	NaN	6666	3069	9733
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9738	27.012	NaN	1889	30	0	379.88	0.033	+			50920	YGPGGLHAA	9	49	421.71125548115305	841.4079580291061	2	421.71087646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YGPGGLHAA_	ENSG00000099904|ENST00000334554|ZDHHC8;ENST00000255890.8_1_22:23742600-23742699:-|nuORF;nc|ENSG00000099904|Q9ULC8-2|ZDHHC8;nc|ENSG00000099904|Q9ULC8-3|ZDHHC8;ZDHHC8|p.T459Rfs*177|6|0.31|ENSG00000099904|chr22:20142999-20142999|C/-|frameshift_variant	39.021493756699265	0.43173687394350213	4				NaN	NaN	0	NaN	6667	3069	9733
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9756	27.049	NaN	10070	30	0	1638.1	0.214	+			40615	SVAKNFFTK	9	70	521.2899219893851	1040.5652910455701	2	521.2902221679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVAKNFFTK_	ENSG00000169891|ENST00000357277|REPS2;nc|ENSG00000169891|Q8NFH8-4|REPS2	126.24258497203832	0.01742065577488747	4				NaN	NaN	0	NaN	6682	3072	9755
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9757	27.052	NaN	4509.3	30	0	1380.9	0.106				-1	 	0	58	511.2872326548083	510.2799561882083	1	511.2878112792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6683	3072	9755
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9758	27.054	NaN	2954.2	30	0	344.64	0.106	+			28003	MVVPPQPPL	9	62	489.2788158761773	976.5430788191546	2	489.2789306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MVVPPQPPL_	ENSG00000266714|ENST00000645453|MYO15B	37.15910966729921	0.4535818937225704	4				NaN	NaN	0	NaN	6684	3072	9755
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9759	27.056	NaN	6999.9	30	0	2138.5	0.106				-1	ATQMVRMILK	10	43	402.8947253388309	1205.6623466166927	3	402.8948669433594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_ATQM(Oxidation (M))VRMILK_	ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5	28.081489160057373	0.6505064946289502	4				NaN	NaN	0	NaN	6685	3072	9755
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9760	27.058	NaN	4171.2	30	0	481.1	0.106	+			16477	HETIRVAVC	9	66	514.2706998768188	1026.5268468204374	2	514.2710571289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HETIRVAVC_	ENSG00000159202|ENST00000360943|UBE2Z;ENST00000513342.5_1_17:46990150-47004493:+|nuORF;nc|ENSG00000159202|Q9H832-2|UBE2Z	64.20726635412375	0.17854274437659667	4				NaN	NaN	0	NaN	6686	3072	9755
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9761	27.06	NaN	1932.3	30	0	276.25	0.106	+			38599	SSGKFFTYK	9	60	532.7743541337362	1063.5341553342723	2	533.2766723632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSGKFFTYK_	ENSG00000106484|ENST00000223215|MEST;nc|ENSG00000106484|Q5EB52-2|MEST;nc|ENSG00000106484|Q5EB52-3|MEST	42.33807565288922	0.3928346960664841	4				NaN	NaN	0	NaN	6687	3072	9755
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9762	27.062	NaN	1415.7	30	0	387.11	0.034			+	29521	PDVRSLNI	8	51	457.258348069985	NaN	0	457.2581787109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PDVRSLNI_	REV__ENSG00000111344|ENST00000548055|RASAL1;REV__ENST00000418411.6_1_12:113540888-113573291:-|nuORF;REV__ENST00000546727.5_1_12:113557151-113573291:-|nuORF;REV__ENST00000548972.5_1_12:113545343-113573291:-|nuORF;REV__ENST00000551051.5_1_12:113546023-113565713:-|nuORF;REV__nc|ENSG00000111344|O95294-2|RASAL1;REV__nc|ENSG00000111344|O95294-3|RASAL1;REV__nc|ENSG00000111344|O95294|RASAL1	32.81241826257853	1.7418937515398478	4				NaN	NaN	0	NaN	6688	3072	9755
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9780	27.099	NaN	10887	30	0	1333.7	0.214	+			1512	AGAAVLPVK	9	60	413.26315822438477	824.5117635155696	2	413.26318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AGAAVLPVK_	ENSG00000178691|ENST00000322652|SUZ12	133.4690685054315	0.013543987435668854	4				NaN	NaN	0	NaN	6703	3075	9779
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9781	27.103	NaN	4258.1	30	0	645.62	0.106	+			50846	YETSKMKVL	9	66	549.7972691542527	1097.5799853753053	2	549.7975463867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YETSKMKVL_	ENSG00000102316|ENST00000375068|MAGED2;nc|ENSG00000102316|Q9UNF1-2|MAGED2	65.46538089061403	0.16805504838372562	4				NaN	NaN	0	NaN	6704	3075	9779
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9782	27.105	NaN	5098.9	30	0	2425.8	0.106	+			17156	HTDLPSPLK	9	60	504.27965091246716	1006.5447488917343	2	504.27978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HTDLPSPLK_	nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM	56.43379154798735	0.2433427591689151	4				NaN	NaN	0	NaN	6705	3075	9779
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9783	27.106	NaN	1233.9	30	0	98.644	0.106	+			27622	MPPYPGPGH	9	50	476.72056872779956	951.4265845223991	2	476.72076416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MPPYPGPGH_	ENSG00000171747|ENST00000307751|LGALS4	60.403631409065575	0.21025000616765316	4				NaN	NaN	0	NaN	6706	3075	9779
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9784	27.108	NaN	1137.7	30	0	74.065	0.034			+	47996	VSPYGVLAV	9	51	452.7621765136719	NaN	0	452.7621765136719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSPYGVLAV_	REV__tr|U7SL66|U7SL66_FUSNUGTPaseObgOS=FusobacteriumnucleatumCTI-5OX=1316586GN=obgPE=3SV=1	38.80614096846853	0.28164298475537564	4				NaN	NaN	0	NaN	6707	3075	9779
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9802	27.146	NaN	5233.8	30	0	1144.7	0.214	+			232	AAMEPLTAR	9	61	480.2522115263346	958.4898701194692	2	480.2523498535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAMEPLTAR_	nc|ENSG00000182872|P0DW28|RBM10	82.7504851949679	0.08565546331141553	4				NaN	NaN	0	NaN	6722	3078	9801
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9803	27.149	NaN	4903.5	30	0	810.48	0.106	+			41695	SVSDLAPPR	9	60	471.255749602876	940.496946272552	2	471.2559509277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVSDLAPPR_	ENSG00000166295|ENST00000299381|ANAPC16	79.71258880314673	0.09879134589249085	4				NaN	NaN	0	NaN	6723	3078	9801
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9804	27.151	NaN	7783.1	30	0	2414.1	0.106	+			29735	PHPPGGLQAPA	11	68	521.2774834551299	1040.5404139770596	2	521.2769775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PHPPGGLQAPA_	ENST00000318080.6_1_9:131857444-131857552:-|nuORF	40.77816245573522	0.5472954108598816	4				NaN	NaN	0	NaN	6724	3078	9801
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9805	27.153	NaN	2893.3	30	0	497.2	0.106	+			16724	HLGALLAR	8	51	425.76663897834345	849.5187250234869	2	425.766357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HLGALLAR_	ENSG00000187094|ENST00000396169|CCK;ENST00000484359.1_1_3:42304789-42306234:-|nuORF	42.47446043378293	0.6409579893742323	4				NaN	NaN	0	NaN	6725	3078	9801
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9806	27.155	NaN	1277.4	30	0	129.07	0.106			+	9049	EGGAVEVKV	9	52	444.24526179380626	NaN	0	444.2452087402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EGGAVEVKV_	REV__ENST00000486335.1_1_2:74702161-74702799:-|nuORF	58.78195531508484	0.1545138866451181	4				NaN	NaN	0	NaN	6726	3078	9801
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9807	27.157	NaN	2996.6	30	0	298.47	0.034	+			30667	QAVQATAQM	9	66	474.23472219163455	946.4548914500691	2	474.2347717285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QAVQATAQM_	ENSG00000071243|ENST00000315870|ING3	93.5975768576971	0.05472259948179787	4				NaN	NaN	0	NaN	6727	3078	9801
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9808	27.157	NaN	1994	30	0	812.56	0.14	+			38253	SQNLSISFQ	9	58	512.2590947527068	1022.5036365722136	2	512.259033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SQNLSISFQ_	ENST00000361740.8_1_22:43014893-43015193:-|nuORF	62.107414245175825	0.1960472003779324	4				NaN	NaN	0	NaN	6728	3078	9801
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9826	27.197	NaN	2072.3	30	0	184.51	0.214	+			36298	SERIKGYAL	9	56	518.794189453125	NaN	0	518.794189453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SERIKGYAL_	ENSG00000104611|ENST00000265807|SH2D4A;nc|ENSG00000104611|Q9H788-2|SH2D4A	42.86426827375447	0.2558691296974908	4				NaN	NaN	0	NaN	6743	3081	9825
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9827	27.2	NaN	1817.6	30	0	493.83	0.106			+	-1	VTSSECVMYL	10	48	396.8476257324219	NaN	0	396.8476257324219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_VTSSEC(Carbamidomethyl (C))VMYL_	REV__ENSG00000105819|ENST00000249269|PMPCB;REV__ENST00000443722.5_1_7:102939135-102952660:+|nuORF;REV__ENST00000444457.5_1_7:102938385-102969496:+|nuORF;REV__ENST00000453466.1_1_7:102939135-102952715:+|nuORF	27.047317107675042	0.41136583337917604	4				NaN	NaN	0	NaN	6744	3081	9825
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9828	27.202	NaN	1319.1	30	0	162.31	0.106			+	33292	RGNRGPAK	8	44	428.25031925241234	NaN	0	428.250244140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RGNRGPAK_	REV__ENST00000378116.8_1_10:15254933-15255023:-|nuORF	33.51558372728122	1.7418937515398478	4				NaN	NaN	0	NaN	6745	3081	9825
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9829	27.204	NaN	1637.7	30	0	179.3	0.106			+	4713	ATLVLGWVHG	10	62	526.7958917696008	1051.5772306060014	2	526.7973022460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATLVLGWVHG_	REV__ENST00000368761.9_1_6:111880407-111880587:-|nuORF	40.5726180659479	0.5438686920517214	4				NaN	NaN	0	NaN	6746	3081	9825
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9830	27.206	NaN	749.69	30	0	155.7	0.106				-1	AVGGCRLPR	9	31	329.1834411621094	NaN	0	329.1834411621094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_AVGGC(Carbamidomethyl (C))RLPR_	ENST00000435096.1_1_7:139044701-139059229:+|nuORF	15.641811463095205	0.38404136392510424	4				NaN	NaN	0	NaN	6747	3081	9825
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9831	27.208	NaN	789.79	30	0	77.67	0.036	+			40214	STSDPIMTAR	10	48	539.7637329101562	NaN	0	539.7637329101562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STSDPIMTAR_	ENSG00000176771|ENST00000409261|NCKAP5;nc|ENSG00000176771|O14513-2|NCKAP5	35.15202426646627	0.38475398474706135	4				NaN	NaN	0	NaN	6748	3081	9825
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9832	27.208	NaN	543.91	30	0	54.714	0.143				-1	VQMLCLLSQK	10	38	610.3302612304688	NaN	0	610.3302612304688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_VQMLC(Carbamidomethyl (C))LLSQK_	ENST00000325157.6_1_22:40161566-40217057:-|nuORF	37.81151784470057	0.3760215235790741	4				NaN	NaN	0	NaN	6749	3081	9825
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9850	27.247	NaN	8764	30	0	1274.3	0.214			+	8346	EAKVAQVL	8	63	429.2583547725974	856.5021566119948	2	429.2583312988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EAKVAQVL_	REV__CASKIN1|p.L618Pfs*10|1|0.31|ENSG00000167971|chr16:2181520-2181521|-/C|frameshift_variant;REV__CASKIN1|p.Q778Pfs*91|1|0.45|ENSG00000167971|chr16:2181035-2181036|-/G|frameshift_variant;REV__CASKIN1|p.Q778Rfs*27|1|0.23|ENSG00000167971|chr16:2181036-2181036|G/-|frameshift_variant;REV__ENSG00000167971|ENST00000343516|CASKIN1	87.75429964447693	0.2842685068779738	4				NaN	NaN	0	NaN	6764	3084	9849
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9851	27.251	NaN	8889.4	30	0	2035	0.106	+			31730	QPAENVNQY	9	58	531.7460870369745	1061.4776211407489	2	531.7470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QPAENVNQY_	ENSG00000130985|ENST00000335972|UBA1;nc|ENSG00000130985|P22314-2|UBA1	113.41158876095287	0.025516849225023126	4				NaN	NaN	0	NaN	6765	3084	9849
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9852	27.253	NaN	6786.2	30	0	1029.4	0.106			+	5574	AVASALTTK	9	60	431.25568384717076	860.4968147611415	2	431.2559814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVASALTTK_	REV__ENSG00000089234|ENST00000419234|BRAP	31.529811441608018	0.5085848003137583	4				NaN	NaN	0	NaN	6766	3084	9849
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9853	27.255	NaN	2653.6	30	0	330.13	0.106	+			2409	APAPPASQY	9	60	451.2241284451332	900.4337039570664	2	451.2244567871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_APAPPASQY_	ENSG00000050820|ENST00000162330|BCAR1;nc|ENSG00000050820|P56945-2|BCAR1;nc|ENSG00000050820|P56945-3|BCAR1;nc|ENSG00000050820|P56945-5|BCAR1;nc|ENSG00000050820|P56945-6|BCAR1;nc|ENSG00000050820|P56945-7|BCAR1;nc|ENSG00000050820|P56945-8|BCAR1	99.37495909608758	0.03983967222258828	4				NaN	NaN	0	NaN	6767	3084	9849
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9854	27.257	NaN	5064.3	30	0	1395.8	0.106				-1	VVCLTNMDLKR	11	67	436.56511620106414	1306.6735192033925	3	436.5653381347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_VVCLTNM(Oxidation (M))DLKR_	ENST00000550479.1_1_12:104335257-104335329:+|nuORF	35.495647763667336	0.6174708002554854	4				NaN	NaN	0	NaN	6768	3084	9849
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9855	27.258	NaN	4979.5	30	0	2147.1	0.106			+	30216	PSRRLDEWGR	10	51	424.55726501345646	1270.6499656405695	3	424.5574645996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PSRRLDEWGR_	REV__ENSG00000164694|ENST00000297267|FNDC1;REV__FNDC1|p.T1443Nfs*81|2|0.16|ENSG00000164694|chr6:159239656-159239657|-/A|frameshift_variant;REV__FNDC1|p.T1443Pfs*84|1|0.31|ENSG00000164694|chr6:159239657-159239657|A/-|frameshift_variant;REV__nc|ENSG00000164694|Q4ZHG4-2|FNDC1	28.081489160057373	0.6505064946289502	4				NaN	NaN	0	NaN	6769	3084	9849
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9856	27.26	NaN	4497.4	30	0	1004.2	0.037				-1	SLMLCILKLA	10	46	374.22056724968013	1119.6398723492405	3	374.22088623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_SLM(Oxidation (M))LCILKLA_	ENSG00000176225|ENST00000640769|RTTN;ENST00000583043.5_1_18:67684852-67806940:-|nuORF;ENST00000583765.1_1_18:67687135-67692051:-|nuORF;nc|ENSG00000176225|Q86VV8-3|RTTN	22.579656572578934	0.6954366826851017	4				NaN	NaN	0	NaN	6770	3084	9849
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9874	27.298	NaN	46889	30	0	17656	0.214	+			36913	SIILRFERA	9	73	368.8887921613775	1103.6445470843325	3	368.88885498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIILRFERA_	ENSG00000149256|ENST00000278550|TENM4;TENM4|p.R2689Gfs*41|1|0.3|ENSG00000149256|chr11:78658303-78658303|G/-|frameshift_variant	51.19269402634007	0.2889735674168909	4				NaN	NaN	0	NaN	6785	3087	9873
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9875	27.301	NaN	7126.3	30	0	1090.9	0.106	+			33390	RIATGSFLK	9	74	496.7976821191749	991.5808113051498	2	496.79742431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RIATGSFLK_	ENSG00000128050|ENST00000512576|PAICS;ENST00000517543.1_1_8:4645110-4645266:+|nuORF;nc|ENSG00000128050|P22234-2|PAICS	167.22876102047192	0.0032399547248545047	4				NaN	NaN	0	NaN	6786	3087	9873
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9876	27.303	NaN	4311.9	30	0	2340.4	0.106				-1	WLNMVRAGLLA	11	52	420.56982421875	NaN	0	420.56982421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_WLNM(Oxidation (M))VRAGLLA_	ENSG00000254986|ENST00000531863|DPP3;nc|ENSG00000254986|Q9NY33-4|DPP3	30.568863376406313	0.42918353898720446	4				NaN	NaN	0	NaN	6787	3087	9873
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9877	27.305	NaN	7680.3	30	0	993.24	0.106			+	26128	LSPMSAGAL	9	57	431.7204439844192	861.4263350356384	2	431.72015380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_LSPM(Oxidation (M))SAGAL_	REV__SLC35E4|p.S64P|1|0.42|ENSG00000100036|chr22:30636640-30636640|T/C|missense_variant	82.30502934623384	0.08758161712619916	4				NaN	NaN	0	NaN	6788	3087	9873
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9878	27.307	NaN	1124.4	30	0	112.69	0.106			+	29848	PLAVSLAGG	9	42	392.73149257901366	NaN	0	392.7315673828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PLAVSLAGG_	REV__ENSG00000130829|ENST00000342782|DUSP9	42.47446043378293	0.25855550551448697	4				NaN	NaN	0	NaN	6789	3087	9873
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9879	27.309	NaN	1409.4	30	0	295.16	0.036			+	22756	KVEEAPALKL	10	46	549.3318690229507	1096.6491851127014	2	549.331787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KVEEAPALKL_	REV__ENSG00000070444|ENST00000174618|MNT	37.81151784470057	0.569310847604193	4				NaN	NaN	0	NaN	6790	3087	9873
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9880	27.309	NaN	1991.5	30	0	239.63	0.14			+	28618	NKTIETVV	8	51	452.26068046364793	902.5068079940959	2	453.2454833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NKTIETVV_	REV__ENSG00000154134|ENST00000397801|ROBO3;REV__nc|ENSG00000154134|Q96MS0-2|ROBO3;REV__ROBO3|p.D1059Tfs*9|1|0.29|ENSG00000154134|chr11:124878121-124878121|G/-|frameshift_variant	26.79610172149135	0.7524337208463756	4				NaN	NaN	0	NaN	6791	3087	9873
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9898	27.349	NaN	4165.7	30	0	672.95	0.214	+			5843	AVIIVGSAK	9	57	429.2764625218988	856.5383721105976	2	429.2763977050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVIIVGSAK_	ENSG00000138074|ENST00000310574|SLC5A6;ENST00000464538.1_1_2:27428216-27429031:-|nuORF;ENST00000488743.6_1_2:27425876-27434347:-|nuORF	77.31757898189308	0.1091473830098891	4				NaN	NaN	0	NaN	6806	3090	9897
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9899	27.352	NaN	7623.6	30	0	1307.2	0.106	+			38518	SSCGLPLGK	9	68	459.7391080648778	917.4636631965557	2	459.73919677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SSC(Carbamidomethyl (C))GLPLGK_	ENSG00000064042|ENST00000503057|LIMCH1;nc|ENSG00000064042|Q9UPQ0-10|LIMCH1;nc|ENSG00000064042|Q9UPQ0-2|LIMCH1;nc|ENSG00000064042|Q9UPQ0-3|LIMCH1;nc|ENSG00000064042|Q9UPQ0-4|LIMCH1;nc|ENSG00000064042|Q9UPQ0-5|LIMCH1;nc|ENSG00000064042|Q9UPQ0-6|LIMCH1;nc|ENSG00000064042|Q9UPQ0-8|LIMCH1;nc|ENSG00000064042|Q9UPQ0-9|LIMCH1;nc|ENSG00000064042|Q9UPQ0|LIMCH1	101.60071028292904	0.0375685401170269	4				NaN	NaN	0	NaN	6807	3090	9897
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9900	27.354	NaN	2943.2	30	0	323.63	0.106	+			22158	KSRRALKW	8	68	522.824150811973	1043.633748690746	2	522.8248901367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KSRRALKW_	ENSG00000196169|ENST00000389916|KIF19;ENST00000359939.10_1_17:72322488-72347101:+|nuORF;ENST00000547389.1_1_17:72322488-72347101:+|nuORF;nc|ENSG00000196169|Q2TAC6-2|KIF19;nc|ENSG00000196169|Q2TAC6-3|KIF19	47.657333605630114	0.6087971902037268	4				NaN	NaN	0	NaN	6808	3090	9897
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9901	27.356	NaN	2282.2	30	0	244.55	0.106	+			34903	SAADVVVVH	9	52	448.745659062784	895.476765192368	2	448.7452087402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SAADVVVVH_	ACAA1|p.L369Wfs*7|1|0.31|ENSG00000060971|chr3:38125659-38125659|G/-|frameshift_variant;ENSG00000060971|ENST00000333167|ACAA1;ENST00000484284.5_1_3:38175441-38178607:-|nuORF;ENST00000489559.1_1_3:38175990-38178538:-|nuORF;nc|ENSG00000060971|P09110-2|ACAA1	82.30502934623384	0.08758161712619916	4				NaN	NaN	0	NaN	6809	3090	9897
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9902	27.358	NaN	7676.7	30	0	523.54	0.106	+			16132	HEADKTYML	9	72	554.2607799511361	1106.507006969072	2	554.261474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HEADKTYML_	ENSG00000143155|ENST00000367833|TIPRL	139.97047562133406	0.010493916756945389	4				NaN	NaN	0	NaN	6810	3090	9897
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9903	27.36	NaN	1514.8	30	0	186.75	0.038	+			34684	RVSTEVTLAVK	11	59	601.8584422380633	1201.7023315429265	2	601.8596801757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RVSTEVTLAVK_	ENSG00000211456|ENST00000389061|SACM1L;ENST00000438671.3_1_3:45731844-45750997:+|nuORF;ENST00000445499.2_1_3:45730957-45754662:+|nuORF;ENST00000463237.5_1_3:45730948-45754703:+|nuORF;ENST00000463347.5_1_3:45730948-45748420:+|nuORF;SACM1L|p.N346Ifs*2|1|0.35|ENSG00000211456|chr3:45732084-45732084|A/-|frameshift_variant	50.48352884301831	0.4144963662491505	4				NaN	NaN	0	NaN	6811	3090	9897
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9904	27.36	NaN	1722.5	30	0	578.56	0.144				-1	SARMLKYR	8	26	347.52587890625	NaN	0	347.52587890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_SARM(Oxidation (M))LKYR_	ENST00000425170.1_1_6:86387844-86387955:-|nuORF	24.20275056022122	1.7418937515398478	4				NaN	NaN	0	NaN	6812	3090	9897
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9922	27.399	NaN	4483.6	30	0	2698.2	0.214				-1	 	0	33	329.2195160394642	656.4244791457285	2	329.21954345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6827	3093	9921
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9923	27.402	NaN	7993.8	30	0	1893.9	0.106	+			1829	AIIENMSTK	9	65	503.7652481895361	1005.5159434458723	2	503.7652282714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AIIENMSTK_	ENSG00000116729|ENST00000262348|WLS;nc|ENSG00000116729|Q5T9L3-2|WLS;nc|ENSG00000116729|Q5T9L3-3|WLS	123.20810148215591	0.019257656778428764	4				NaN	NaN	0	NaN	6828	3093	9921
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9924	27.404	NaN	9060.9	30	0	1344.8	0.106	+			50852	YEVKSENL	8	65	491.2478620515428	980.4811711698857	2	491.24755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YEVKSENL_	ENSG00000132383|ENST00000254719|RPA1	101.60071028292904	0.24979566554663588	4				NaN	NaN	0	NaN	6829	3093	9921
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9925	27.406	NaN	2368.2	30	0	542.4	0.106	+			49433	VVVGAVGVGK	10	46	442.7816380991579	883.5487232651158	2	442.78131103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVVGAVGVGK_	KRAS|p.G12V|32|0.43|ENSG00000133703|chr12:25245350-25245350|C/A|missense_variant;NRAS|p.G12V|1|0.52|ENSG00000213281|chr1:114716126-114716126|C/A|missense_variant	71.29570347882199	0.26673431503403816	4				NaN	NaN	0	NaN	6830	3093	9921
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9926	27.408	NaN	7358.6	30	0	816.61	0.106	+			1085	AELATRAL	8	64	422.74813010138183	843.4817072695637	2	422.748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AELATRAL_	ENSG00000173801|ENST00000393931|JUP	79.71258880314673	0.32596852995588826	4				NaN	NaN	0	NaN	6831	3093	9921
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9927	27.409	NaN	1635.9	30	0	182.41	0.106	+			35984	SEHGEKLYL	9	52	538.2743440561061	1074.534135179012	2	538.2749633789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SEHGEKLYL_	ENSG00000071051|ENST00000233154|NCK2	67.49366992349736	0.1516260258713357	4				NaN	NaN	0	NaN	6832	3093	9921
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9928	27.411	NaN	2368.4	30	0	326.52	0.035	+			27529	MPADTNKAF	9	58	497.73653740769777	993.4585218821956	2	497.736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MPADTNKAF_	ENSG00000125037|ENST00000245046|EMC3;ENST00000487465.5_1_3:10011273-10028351:-|nuORF;nc|ENSG00000125037|Q9P0I2-2|EMC3	54.776311868738084	0.25715957988447635	4				NaN	NaN	0	NaN	6833	3093	9921
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9946	27.449	NaN	13446	30	0	2226.3	0.214	+			34354	RTQGLMIMK	9	75	539.2982477766965	1076.5819426201929	2	539.2994995117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTQGLMIMK_	ENSG00000137275|ENST00000259808|RIPK1;nc|ENSG00000137275|Q13546-2|RIPK1	106.88024417677582	0.032181361622142884	4				NaN	NaN	0	NaN	6848	3096	9945
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9947	27.452	NaN	7077.4	30	0	2770.1	0.106			+	47453	VPVLATIGSA	10	63	464.27870593770905	926.5428589422181	2	464.27886962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VPVLATIGSA_	REV__ENSG00000185758|ENST00000541814|CLDN24	45.9519527083369	0.4943008177357963	4				NaN	NaN	0	NaN	6849	3096	9945
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9948	27.454	NaN	1646.8	30	0	344.9	0.106	+			10339	ETTISTEKL	9	51	511.27406953555663	1020.5335861379133	2	511.27435302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ETTISTEKL_	ENSG00000146839|ENST00000613979|ZAN;ENSG00000146839|ENST00000613979|ZAN;ENSG00000146839|ENST00000613979|ZAN;nc|ENSG00000146839|Q9Y493-2|ZAN;nc|ENSG00000146839|Q9Y493-2|ZAN;nc|ENSG00000146839|Q9Y493-2|ZAN;nc|ENSG00000146839|Q9Y493-3|ZAN;nc|ENSG00000146839|Q9Y493-3|ZAN;nc|ENSG00000146839|Q9Y493-3|ZAN;nc|ENSG00000146839|Q9Y493-4|ZAN;nc|ENSG00000146839|Q9Y493-4|ZAN;nc|ENSG00000146839|Q9Y493-4|ZAN;nc|ENSG00000146839|Q9Y493-5|ZAN;nc|ENSG00000146839|Q9Y493-5|ZAN;nc|ENSG00000146839|Q9Y493-5|ZAN;nc|ENSG00000146839|Q9Y493-6|ZAN;nc|ENSG00000146839|Q9Y493-6|ZAN;nc|ENSG00000146839|Q9Y493-6|ZAN;nc|ENSG00000146839|Q9Y493-7|ZAN;nc|ENSG00000146839|Q9Y493-7|ZAN;nc|ENSG00000146839|Q9Y493-7|ZAN;ZAN|p.C2312Lfs*43|1|0.24|ENSG00000146839|chr7:100786096-100786097|-/TG|frameshift_variant;ZAN|p.C2312Lfs*43|1|0.24|ENSG00000146839|chr7:100786096-100786097|-/TG|frameshift_variant;ZAN|p.C2312Lfs*43|1|0.24|ENSG00000146839|chr7:100786096-100786097|-/TG|frameshift_variant;ZAN|p.E2695Rfs*83|1|0.15|ENSG00000146839|chr7:100794212-100794212|G/-|frameshift_variant;ZAN|p.E2695Rfs*83|1|0.15|ENSG00000146839|chr7:100794212-100794212|G/-|frameshift_variant;ZAN|p.E2695Rfs*83|1|0.15|ENSG00000146839|chr7:100794212-100794212|G/-|frameshift_variant;ZAN|p.G2740Efs*38|1|0.09|ENSG00000146839|chr7:100795285-100795285|G/-|frameshift_variant;ZAN|p.G2740Efs*38|1|0.09|ENSG00000146839|chr7:100795285-100795285|G/-|frameshift_variant;ZAN|p.G2740Efs*38|1|0.09|ENSG00000146839|chr7:100795285-100795285|G/-|frameshift_variant;ZAN|p.I1593Sfs*12|1|0.22|ENSG00000146839|chr7:100767168-100767168|G/-|frameshift_variant;ZAN|p.I1593Sfs*12|1|0.22|ENSG00000146839|chr7:100767168-100767168|G/-|frameshift_variant;ZAN|p.I1593Sfs*12|1|0.22|ENSG00000146839|chr7:100767168-100767168|G/-|frameshift_variant	37.81151784470057	0.4459294069877048	4				NaN	NaN	0	NaN	6850	3096	9945
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9949	27.456	NaN	2899.6	30	0	732.47	0.106			+	47288	VNGFGQKY	8	50	456.73213905295	911.4497251727	2	456.73193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VNGFGQKY_	REV__ENSG00000171564|ENST00000302068|FGB	25.450171626174864	0.7628259754767981	4				NaN	NaN	0	NaN	6851	3096	9945
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9950	27.458	NaN	1422.2	30	0	315.12	0.106			+	3469	ASSALSAIGL	10	53	445.2533825443883	888.4922121555766	2	445.25299072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASSALSAIGL_	REV__ENST00000393784.7_1_5:172377848-172378373:+|nuORF	42.396135135203025	0.5270658956260207	4				NaN	NaN	0	NaN	6852	3096	9945
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9951	27.46	NaN	1215.3	30	0	288.73	0.036			+	-1	SSLAQKCPAP	10	28	353.5134939031009	1057.5186523095026	3	353.5134582519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_SSLAQKC(Carbamidomethyl (C))PAP_	REV__ENSG00000168939|ENST00000695325|SPRY3	23.52269567125451	0.6877354443478558	4				NaN	NaN	0	NaN	6853	3096	9945
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9952	27.46	NaN	1308.1	30	0	819.04	0.14			+	-1	QGKLMKKK	8	20	326.2052790070704	NaN	0	326.2055358886719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_QGKLM(Oxidation (M))KKK_	REV__ARHGEF26|p.T596Nfs*3|1|0.29|ENSG00000114790|chr3:154194653-154194654|-/A|frameshift_variant;REV__ENSG00000114790|ENST00000465093|ARHGEF26;REV__nc|ENSG00000114790|Q96DR7-3|ARHGEF26;REV__nc|ENSG00000114790|Q96DR7-4|ARHGEF26	21.9598887501803	1.7418937515398478	4				NaN	NaN	0	NaN	6854	3096	9945
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9970	27.5	NaN	10291	30	0	1800.6	0.214	+			35195	SAISSPLTK	9	67	452.26068046364793	902.5068079940959	2	452.260498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAISSPLTK_	AKAP13|p.S1688C|1|0.06|ENSG00000170776|chr15:85669792-85669792|C/G|missense_variant;AKAP13|p.T2400Nfs*3|1|0.33|ENSG00000170776|chr15:85730617-85730618|-/C|frameshift_variant;ENSG00000170776|ENST00000394518|AKAP13;nc|ENSG00000170776|Q12802-2|AKAP13;nc|ENSG00000170776|Q12802-4|AKAP13	88.17693792209575	0.07000514020414955	4				NaN	NaN	0	NaN	6869	3099	9969
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9971	27.503	NaN	37930	30	0	28129	0.106				-1	 	0	47	343.1988002827666	684.3830476323333	2	343.1987609863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6870	3099	9969
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9972	27.505	NaN	4193.8	30	0	746.55	0.106	+			44488	TSSDVIEMK	9	58	505.2467804864548	1008.4790080397096	2	505.24676513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TSSDVIEMK_	ENSG00000039123|ENST00000230640|MTREX	80.45461616416974	0.09558281504443908	4				NaN	NaN	0	NaN	6871	3099	9969
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9973	27.507	NaN	10660	30	0	1561	0.106	+			27623	MPPYPGPGH	9	66	476.72056872779956	951.4265845223991	2	476.72027587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MPPYPGPGH_	ENSG00000171747|ENST00000307751|LGALS4	39.021493756699265	0.43173687394350213	4				NaN	NaN	0	NaN	6872	3099	9969
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9974	27.509	NaN	4633.2	30	0	507.58	0.106			+	20918	KIVGPLANCE	10	62	522.2792473012939	1042.5439416693878	2	522.7831420898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KIVGPLANCE_	REV__ENSG00000178852|ENST00000331493|EFCAB13;REV__ENST00000520776.5_1_17:45405719-45473360:+|nuORF;REV__nc|ENSG00000178852|Q8IY85-2|EFCAB13	27.047317107675042	0.6589519614906109	4				NaN	NaN	0	NaN	6873	3099	9969
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9975	27.511	NaN	950.42	30	0	191.92	0.035			+	11178	FGTTLGCYVG	10	46	509.2402878902819	1016.4660228473638	2	509.24041748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FGTTLGCYVG_	REV__ENSG00000117394|ENST00000426263|SLC2A1	53.351449002276354	0.42630798468005626	4				NaN	NaN	0	NaN	6874	3099	9969
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9976	27.511	NaN	1206.6	30	0	106.97	0.139	+			1984	AKAPLSTVSA	10	56	472.77391318745936	NaN	0	472.77374267578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AKAPLSTVSA_	ENSG00000157978|ENST00000374338|LDLRAP1;ENST00000474283.1_1_1:25890132-25893480:+|nuORF;ENST00000484476.5_1_1:25889538-25893480:+|nuORF;ENST00000488127.1_1_1:25880414-25890333:+|nuORF	34.172542307311794	0.38797011891751465	4				NaN	NaN	0	NaN	6875	3099	9969
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9994	27.549	NaN	13984	30	0	2976.6	0.214	+			38136	SQADGSFLK	9	82	476.74009364921744	951.4656343652349	2	476.7400817871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SQADGSFLK_	ENSG00000152818|ENST00000367545|UTRN;nc|ENSG00000152818|P46939-2|UTRN;UTRN|p.G3160*|1|0.03|ENSG00000152818|chr6:144821001-144821002|AG/-|frameshift_variant;UTRN|p.R3003Pfs*5|1|0.27|ENSG00000152818|chr6:144793915-144793916|-/C|frameshift_variant;UTRN|p.T2422Hfs*35|1|0.47|ENSG00000152818|chr6:144557282-144557282|A/-|frameshift_variant	74.1650062923329	0.12277912660386392	4				NaN	NaN	0	NaN	6890	3102	9993
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9995	27.553	NaN	2560.9	30	0	226.44	0.106			+	18743	ITITFVAHS	9	56	494.77479092817117	987.5350289231424	2	494.7750244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ITITFVAHS_	REV__ENSG00000163808|ENST00000326047|KIF15;REV__KIF15|p.D274Ifs*7|1|0.39|ENSG00000163808|chr3:44794392-44794392|A/-|frameshift_variant;REV__KIF15|p.K1251Nfs*11|1|0.08|ENSG00000163808|chr3:44848041-44848042|-/TTTCAAATTC|frameshift_variant;REV__KIF15|p.K449Rfs*10|1|0.38|ENSG00000163808|chr3:44801807-44801807|A/-|frameshift_variant;REV__nc|ENSG00000163808|Q9NS87-2|KIF15;REV__nc|ENSG00000163808|Q9NS87-4|KIF15	44.116797842482775	0.37197099687881774	4				NaN	NaN	0	NaN	6891	3102	9993
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9996	27.555	NaN	1989.7	30	0	422.04	0.106				-1	 	0	57	469.7870990628464	937.5596451924928	2	469.7866516113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6892	3102	9993
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9997	27.557	NaN	1293.6	30	0	127.31	0.106	+			48093	VSTGAVKLPS	10	58	479.78216552734375	NaN	0	479.78216552734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSTGAVKLPS_	ENSG00000171495|ENST00000399564|MROH2B;MROH2B|p.D1229Tfs*15|1|0.23|ENSG00000171495|chr5:41007378-41007378|C/-|frameshift_variant;MROH2B|p.S691Lfs*6|1|0.45|ENSG00000171495|chr5:41038879-41038879|A/-|frameshift_variant;nc|ENSG00000171495|Q7Z745-2|MROH2B	49.536043120802724	0.30853568297719935	4				NaN	NaN	0	NaN	6893	3102	9993
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9998	27.558	NaN	2264.5	30	0	281.81	0.033			+	14070	GSKQILHA	8	54	427.2485791181	NaN	0	427.21484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GSKQILHA_	REV__ENSG00000173612|ENST00000310357|GPRC6A;REV__GPRC6A|p.L564Vfs*14|1|0.08|ENSG00000173612|chr6:116793233-116793234|-/TATTTAC|frameshift_variant;REV__GPRC6A|p.V453Lfs*6|1|0.08|ENSG00000173612|chr6:116800775-116800776|-/TAAG|frameshift_variant;REV__nc|ENSG00000173612|Q5T6X5-2|GPRC6A;REV__nc|ENSG00000173612|Q5T6X5-3|GPRC6A	30.503639358989545	1.7418937515398478	4				NaN	NaN	0	NaN	6894	3102	9993
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10016	27.596	NaN	9516.5	30	0	1512.9	0.214	+			35998	SEHVKLEQL	9	78	541.7962063974793	NaN	0	541.796142578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEHVKLEQL_	ARHGAP1|p.L237Cfs*135|2|0.38|ENSG00000175220|chr11:46680674-46680674|G/-|frameshift_variant;ARHGAP1|p.L237Rfs*135|1|0.37|ENSG00000175220|chr11:46680673-46680673|A/-|frameshift_variant;ENSG00000175220|ENST00000311956|ARHGAP1	138.06239232086	0.0004957345888817657	4				NaN	NaN	0	NaN	6909	3105	10015
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10017	27.6	NaN	5570.1	30	0	1853.7	0.106	+			40383	STTVIGCVK	9	53	454.24900883240934	906.4834647316187	2	454.2491455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STTVIGCVK_	ENSG00000189339|ENST00000617444|SLC35E2B;ENST00000481276.1_1_1:1602946-1608282:-|nuORF;nc|ENSG00000215790|P0CK97-2|SLC35E2A;nc|ENSG00000215790|P0CK97|SLC35E2A	101.60071028292904	0.0375685401170269	4				NaN	NaN	0	NaN	6910	3105	10015
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10018	27.602	NaN	1863.3	30	0	357.53	0.106	+			31731	QPAENVNQY	9	51	531.7460870369745	1061.4776211407489	2	531.7462768554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QPAENVNQY_	ENSG00000130985|ENST00000335972|UBA1;nc|ENSG00000130985|P22314-2|UBA1	64.20726635412375	0.17854274437659667	4				NaN	NaN	0	NaN	6911	3105	10015
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10019	27.603	NaN	1766.4	30	0	192.9	0.106	+			5482	AVAATAVTSPV	11	55	493.7793795142933	985.5442060953866	2	493.7795715332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVAATAVTSPV_	ENST00000429709.6_1_3:179280735-179280855:+|nuORF	45.97224482568171	0.4762245054624163	4				NaN	NaN	0	NaN	6912	3105	10015
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10020	27.605	NaN	5298.1	30	0	641.35	0.106	+			39176	SSYPGLVAK	9	59	461.25541894343	920.49628495366	2	461.7568664550781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSYPGLVAK_	ENSG00000089472|ENST00000343002|HEPH;HEPH|p.R1086Qfs*4|1|0.29|ENSG00000089472|chrX:66266444-66266445|-/C|frameshift_variant;nc|ENSG00000089472|Q9BQS7-2|HEPH;nc|ENSG00000089472|Q9BQS7-3|HEPH;nc|ENSG00000089472|Q9BQS7-4|HEPH	47.657333605630114	0.33044192980041115	4				NaN	NaN	0	NaN	6913	3105	10015
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10021	27.607	NaN	726.51	30	0	64.74	0.033	+			44339	TSGLKEVV	8	42	416.7420959472656	NaN	0	416.7420959472656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TSGLKEVV_	ENST00000487064.1_1_19:33832314-33832719:+|nuORF	30.503639358989545	1.7418937515398478	4				NaN	NaN	0	NaN	6914	3105	10015
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10039	27.644	NaN	9633.9	30	0	1734.6	0.214	+			39177	SSYPGLVAK	9	60	461.25541894343	920.49628495366	2	461.2554626464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSYPGLVAK_	ENSG00000089472|ENST00000343002|HEPH;HEPH|p.R1086Qfs*4|1|0.29|ENSG00000089472|chrX:66266444-66266445|-/C|frameshift_variant;nc|ENSG00000089472|Q9BQS7-2|HEPH;nc|ENSG00000089472|Q9BQS7-3|HEPH;nc|ENSG00000089472|Q9BQS7-4|HEPH	62.107414245175825	0.1960472003779324	4				NaN	NaN	0	NaN	6929	3108	10038
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10040	27.647	NaN	3118.8	30	0	1403.8	0.106			+	23412	LAARDLVQ	8	52	443.26142276897406	884.5082926047481	2	443.2613525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LAARDLVQ_	REV__ENSG00000169994|ENST00000409816|MYO7B;REV__nc|ENSG00000169994|Q6PIF6-2|MYO7B;REV__nc|ENSG00000169994|Q6PIF6|MYO7B	45.9519527083369	0.6193794311207887	4				NaN	NaN	0	NaN	6930	3108	10038
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10041	27.649	NaN	3963.1	30	0	419.78	0.106	+			46300	VEKEGIHVL	9	62	512.2950024615039	1022.5754519898079	2	512.2957763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VEKEGIHVL_	chr1:31911841-31915895|139|19.5|0.0|20.89|-|0|None,PTP4A2|1;ENSG00000112245|ENST00000626021|PTP4A1;ENSG00000184007|ENST00000647444|PTP4A2;ENST00000484483.1_1_1:32381486-32384666:-|nuORF;nc|ENSG00000184007|Q12974-2|PTP4A2;nc|ENSG00000184007|Q12974-4|PTP4A2	120.8684288430529	0.02067403653475984	4				NaN	NaN	0	NaN	6931	3108	10038
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10042	27.651	NaN	4914.7	30	0	974.58	0.106	+			6057	AVMKDVVLIRK	11	66	424.6004263716862	1270.7794497152586	3	424.6005554199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVMKDVVLIRK_	ENSG00000068654|ENST00000263857|POLR1A;ENST00000486964.5_1_2:86305209-86332944:-|nuORF	82.49433358170734	0.13157841501534762	4				NaN	NaN	0	NaN	6932	3108	10038
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10043	27.653	NaN	2096.2	30	0	430.09	0.106	+			8178	EAAPHDIGY	9	54	486.7247547774736	971.4349566217472	2	486.7245178222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EAAPHDIGY_	ENSG00000124357|ENST00000244204|NAGK;ENST00000472519.5_1_2:71300598-71303116:+|nuORF;nc|ENSG00000124357|Q9UJ70-2|NAGK	18.324413293986947	0.6112419832031293	4				NaN	NaN	0	NaN	6933	3108	10038
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10044	27.655	NaN	2262.7	30	0	303.58	0.034			+	8038	DTVIQHGY	8	55	466.7269226013481	931.4392922694963	2	466.727294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DTVIQHGY_	REV__ENSG00000181885|ENST00000360325|CLDN7;REV__nc|ENSG00000181885|O95471-2|CLDN7	45.9519527083369	0.6193794311207887	4				NaN	NaN	0	NaN	6934	3108	10038
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10062	27.692	NaN	4841.3	30	0	517.91	0.214	+			7763	DNWSVTNL	8	59	474.7244976174576	947.4344423017152	2	474.724365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DNWSVTNL_	sp|F5H9Z4|UL20_HCMVMMembraneproteinUL20OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL20PE=3SV=1	58.78195531508484	0.5138399468736706	4				NaN	NaN	0	NaN	6949	3111	10061
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10063	27.695	NaN	7472.5	30	0	1355.2	0.106			+	23687	LASSTGSVL	9	65	417.7318377483713	833.4491225635426	2	417.7316589355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LASSTGSVL_	REV__ENSG00000177673|ENST00000313965|TEX44	76.84663266511073	0.11118375776443899	4				NaN	NaN	0	NaN	6950	3111	10061
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10064	27.697	NaN	12691	30	0	2252	0.106	+			33386	RIADIFVKK	9	63	363.8971990464137	1088.669767739441	3	363.8973693847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RIADIFVKK_	ENSG00000180263|ENST00000343958|FGD6;ENST00000451107.3_1_12:95475298-95611245:-|nuORF;nc|ENSG00000180263|Q6ZV73-2|FGD6	56.632244143249146	0.24168844994051353	4				NaN	NaN	0	NaN	6951	3111	10061
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10065	27.699	NaN	2719.5	30	0	346.06	0.106			+	20931	KKAKYKPNI	9	55	545.3428106513549	NaN	0	545.3426513671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KKAKYKPNI_	REV__ENSG00000196353|ENST00000429747|CPNE4;REV__nc|ENSG00000196353|Q96A23-2|CPNE4	37.81151784470057	0.28666463014928195	4				NaN	NaN	0	NaN	6952	3111	10061
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10066	27.701	NaN	1172.1	30	0	132.81	0.106			+	28951	NSCWRVPAL	9	49	523.2653128417342	1044.5160727502682	2	523.26513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NSCWRVPAL_	REV__ENST00000528878.1_1_7:64465174-64465315:-|nuORF	24.519189625965996	0.574102787014149	4				NaN	NaN	0	NaN	6953	3111	10061
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10067	27.703	NaN	1272	30	0	260.75	0.036			+	9663	ELSSAARIQQ	10	39	551.7960974539692	1101.5776419747383	2	552.2979736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ELSSAARIQQ_	REV__ENSG00000165197|ENST00000297904|VEGFD	30.317721548370564	0.6322445173429027	4				NaN	NaN	0	NaN	6954	3111	10061
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10085	27.74	NaN	18809	30	0	2322.9	0.214	+			37159	SIVKESILK	9	80	508.8210598961348	1015.6275668590696	2	508.82110595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIVKESILK_	ENST00000436367.5_1_6:16658088-16761588:-|nuORF	152.06079943815163	0.00638878961959199	4				NaN	NaN	0	NaN	6969	3114	10084
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10086	27.744	NaN	5051	30	0	687.41	0.106	+			12900	GESEKLVRL	9	60	515.7978941640165	1029.581235394833	2	515.7982177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GESEKLVRL_	ENSG00000102781|ENST00000380615|KATNAL1;ENSG00000186625|ENST00000367411|KATNA1;ENST00000481905.5_1_6:149919348-149924475:-|nuORF;KATNAL1|p.P379Yfs*13|1|0.23|ENSG00000102781|chr13:30227424-30227425|-/TA|frameshift_variant;nc|ENSG00000186625|O75449-2|KATNA1	98.62937762414208	0.04060045538121712	4				NaN	NaN	0	NaN	6970	3114	10084
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10087	27.746	NaN	4354.3	30	0	490.36	0.106				-1	MVDCISHV	8	60	480.7170434788474	959.4195340244949	2	480.71722412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_MVDC(Carbamidomethyl (C))ISHV_	ENST00000468435.6_1_9:6506198-6506309:+|nuORF	50.0245360154114	0.5941082100236891	4				NaN	NaN	0	NaN	6971	3114	10084
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10088	27.748	NaN	13652	30	0	2492	0.106	+			17226	HVITKTMEL	9	75	536.2966757655347	1070.5787985978693	2	536.2976684570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HVITKTMEL_	ENSG00000153201|ENST00000283195|RANBP2;RANBP2|p.F3068Lfs*10|1|0.06|ENSG00000153201|chr2:108782692-108782692|T/-|frameshift_variant;RANBP2|p.H3114Sfs*18|1|0.33|ENSG00000153201|chr2:108782827-108782828|-/T|frameshift_variant	154.1183686248401	0.005909203230691971	4				NaN	NaN	0	NaN	6972	3114	10084
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10089	27.75	NaN	2135.5	30	0	241.64	0.106	+			435	AAVDAGMAM	9	46	426.6828982950297	851.3512436568594	2	426.6829528808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_AAVDAGM(Oxidation (M))AM_	ENSG00000011304|ENST00000356948|PTBP1;ENST00000586944.5_1_19:797434-805231:+|nuORF;nc|ENSG00000011304|P26599-1|PTBP1;nc|ENSG00000011304|P26599-2|PTBP1	76.84663266511073	0.11118375776443899	4				NaN	NaN	0	NaN	6973	3114	10084
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10090	27.751	NaN	5704.4	30	0	1169	0.034			+	2199	ALPPSSPAVE	10	68	484.25805194388596	NaN	0	484.2580261230469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ALPPSSPAVE_	REV__ENSG00000083838|ENST00000594369|ZNF446;REV__ENST00000391694.4_1_19:58988585-58991546:+|nuORF;REV__nc|ENSG00000083838|Q9NWS9-2|ZNF446	45.9519527083369	0.331194823726099	4				NaN	NaN	0	NaN	6974	3114	10084
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10091	27.752	NaN	4320.8	30	0	1559.5	0.143				-1	 	0	48	343.1988002827666	684.3830476323333	2	344.20123291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6975	3114	10084
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10109	27.791	NaN	4103.6	30	0	769.31	0.214	+			47729	VSGEPLLAK	9	54	457.27107829456065	912.5276036559213	2	457.27081298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSGEPLLAK_	ENSG00000204104|ENST00000373327|TRAF3IP1;nc|ENSG00000204104|Q8TDR0-2|TRAF3IP1;TRAF3IP1|p.E258Rfs*5|2|0.24|ENSG00000204104|chr2:238329189-238329189|G/-|frameshift_variant	64.20726635412375	0.17854274437659667	4				NaN	NaN	0	NaN	6990	3117	10108
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10110	27.795	NaN	3149.7	30	0	227.63	0.106	+			13763	GQFKDIITK	9	63	525.3027347990303	1048.5909166648605	2	525.3037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GQFKDIITK_	ENSG00000070371|ENST00000427926|CLTCL1;ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000070371|P53675-2|CLTCL1;nc|ENSG00000141367|Q00610-2|CLTC	89.02883481214508	0.06760336634167786	4				NaN	NaN	0	NaN	6991	3117	10108
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10111	27.797	NaN	2397.8	30	0	413.87	0.106			+	39001	SSSFVTIEQ	9	57	499.2454596242212	996.4763663152424	2	499.2452697753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSSFVTIEQ_	REV__ENSG00000116668|ENST00000367500|SWT1	70.8162118820467	0.13725933411854815	4				NaN	NaN	0	NaN	6992	3117	10108
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10112	27.799	NaN	4066.5	30	0	743.96	0.106	+			33420	RIIAVDINK	9	65	521.3241012573997	1040.6336495815992	2	521.324951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RIIAVDINK_	ADH1B|p.A318Lfs*29|1|0.06|ENSG00000196616|chr4:99311533-99311533|C/-|frameshift_variant;ENSG00000187758|ENST00000209668|ADH1A;ENSG00000196616|ENST00000305046|ADH1B;ENSG00000248144|ENST00000515683|ADH1C;nc|ENSG00000196616|P00325-2|ADH1B	63.53385203322761	0.18415635464017938	4				NaN	NaN	0	NaN	6993	3117	10108
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10113	27.801	NaN	7467.9	30	0	2794	0.106	+			39911	STLVLNVKI	9	47	329.5461667795503	985.6166709388508	3	329.54638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STLVLNVKI_	ENST00000380916.8_1_9:14611214-14611316:-|nuORF	36.446750945000026	0.4619375763483977	4				NaN	NaN	0	NaN	6994	3117	10108
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10114	27.802	NaN	2426.2	30	0	381.29	0.106			+	4546	ATLDEDIAK	9	64	488.25271200503875	974.4908710768775	2	488.25250244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATLDEDIAK_	REV__ENSG00000154310|ENST00000436636|TNIK;REV__nc|ENSG00000154310|Q9UKE5-2|TNIK;REV__nc|ENSG00000154310|Q9UKE5-3|TNIK;REV__nc|ENSG00000154310|Q9UKE5-5|TNIK;REV__TNIK|p.E1253Kfs*13|1|0.04|ENSG00000154310|chr3:171066678-171066678|C/-|frameshift_variant;REV__TNIK|p.F1336Lfs*15|1|0.15|ENSG00000154310|chr3:171063956-171063956|A/-|frameshift_variant;REV__TNIK|p.V1263Cfs*3|1|0.42|ENSG00000154310|chr3:171066648-171066648|C/-|frameshift_variant	54.776311868738084	0.25715957988447635	4				NaN	NaN	0	NaN	6995	3117	10108
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10115	27.804	NaN	2240.5	30	0	459.54	0.035	+			33128	REPKKLDP	8	53	491.7870928188246	981.5596327044492	2	491.7869873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_REPKKLDP_	LAMA1|p.E248K|1|0.11|ENSG00000101680|chr18:7049104-7049104|C/T|missense_variant	35.61828744233558	0.6843154725607303	4				NaN	NaN	0	NaN	6996	3117	10108
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10132	27.84	NaN	51422	30	0	17590	0.214	+			40679	SVASPFTSK	9	75	462.24508428618685	922.4756156391737	2	462.244873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVASPFTSK_	ATP13A3|p.F1107Lfs*5|1|0.42|ENSG00000133657|chr3:194419960-194419960|A/-|frameshift_variant;ATP13A3|p.L1114Ffs*17|1|0.25|ENSG00000133657|chr3:194419939-194419940|-/A|frameshift_variant;ATP13A3|p.L1114Yfs*22|1|0.23|ENSG00000133657|chr3:194419940-194419940|A/-|frameshift_variant;ATP13A3|p.P1198Lfs*19|1|0.04|ENSG00000133657|chr3:194406007-194406008|-/ATATAGTA|frameshift_variant;ATP13A3|p.S1110Ffs*21|2|0.22|ENSG00000133657|chr3:194419952-194419953|-/A|frameshift_variant;ATP13A3|p.V1108Cfs*23|1|0.26|ENSG00000133657|chr3:194419959-194419960|-/A|frameshift_variant;ENSG00000127249|ENST00000342695|ATP13A4;ENSG00000133657|ENST00000645319|ATP13A3;ENSG00000187527|ENST00000342358|ATP13A5;nc|ENSG00000133657|Q9H7F0-2|ATP13A3;nc|ENSG00000133657|Q9H7F0|ATP13A3	98.58198989935565	0.04066992115528678	4				NaN	NaN	0	NaN	7010	3120	10131
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10133	27.844	NaN	4349.9	30	0	481.57	0.106	+			17633	IEKDIAAHI	9	70	505.2872292499213	1008.5599055666427	2	505.28704833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IEKDIAAHI_	ENSG00000088986|ENST00000242577|DYNLL1	115.49404669440601	0.023927554121326553	4				NaN	NaN	0	NaN	7011	3120	10131
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10134	27.846	NaN	12351	30	0	4526.3	0.106	+			45179	TVMNGALVK	9	64	466.7649466413695	931.515340349539	2	466.76483154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVMNGALVK_	ENSG00000131389|ENST00000622186|SLC6A6;SLC6A6|p.R601H|1|0.36|ENSG00000131389|chr3:14484946-14484946|G/A|missense_variant	109.47833844074708	0.029530294723441826	4				NaN	NaN	0	NaN	7012	3120	10131
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10135	27.848	NaN	2673.4	30	0	341.45	0.106	+			34471	RVAETIFVK	9	61	531.8188114028429	1061.6230698724858	2	531.8193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RVAETIFVK_	ENSG00000107954|ENST00000369780|NEURL1;nc|ENSG00000107954|O76050-2|NEURL1	41.42661286455405	0.403525789677298	4				NaN	NaN	0	NaN	7013	3120	10131
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10136	27.849	NaN	1509.9	30	0	776.49	0.106				-1	 	0	29	336.19095418218177	670.3673554311636	2	336.1910095214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7014	3120	10131
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10137	27.851	NaN	2329.2	30	0	498.22	0.106	+			39872	STLPKSLLK	9	54	493.81575885104127	985.6169647688826	2	493.8155517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STLPKSLLK_	CKAP5|p.K1126Rfs*25|1|0.46|ENSG00000175216|chr11:46767609-46767609|T/-|frameshift_variant;CKAP5|p.V1971Lfs*42|1|0.03|ENSG00000175216|chr11:46744211-46744212|-/TTGAAAAAAAG|frameshift_variant;ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5	56.632244143249146	0.24168844994051353	4				NaN	NaN	0	NaN	7015	3120	10131
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10138	27.853	NaN	6170.7	30	0	2461.9	0.036			+	42589	TASVAIRLVS	10	34	339.5411634430877	1015.6016609294632	3	339.5414123535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TASVAIRLVS_	REV__ENST00000480321.1_1_13:113699393-113699726:+|nuORF	14.137123925751023	0.7446123510383054	4				NaN	NaN	0	NaN	7016	3120	10131
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10156	27.891	NaN	6068.2	30	0	1737.6	0.214	+			29059	NTIDPSHPM	9	66	506.2317078756812	1010.4488628181624	2	506.2319641113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NTIDPSHPM_	ENSG00000090861|ENST00000261772|AARS1;nc|ENSG00000090861|P49588-2|AARS1	122.1759843771914	0.019882474861609503	4				NaN	NaN	0	NaN	7031	3123	10155
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10157	27.894	NaN	3459.9	30	0	752.64	0.106	+			48045	VSSAVILTK	9	53	459.2867915334493	916.5590301336986	2	459.2867736816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSSAVILTK_	ENSG00000120519|ENST00000335472|SLC10A7;nc|ENSG00000120519|Q0GE19-1|SLC10A7;nc|ENSG00000120519|Q0GE19-3|SLC10A7;nc|ENSG00000120519|Q0GE19-4|SLC10A7;nc|ENSG00000120519|Q0GE19-5|SLC10A7	42.86426827375447	0.38666266728046506	4				NaN	NaN	0	NaN	7032	3123	10155
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10158	27.896	NaN	5230.2	30	0	1350.3	0.106	+			32079	QSCYIAVAR	9	63	534.2688462213725	1066.523139509545	2	534.26953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_QSC(Carbamidomethyl (C))YIAVAR_	ENSG00000120694|ENST00000320027|HSPH1;HSPH1|p.G22Afs*66|1|0.43|ENSG00000120694|chr13:31161518-31161518|C/-|frameshift_variant;HSPH1|p.N45Ifs*43|2|0.34|ENSG00000120694|chr13:31158837-31158837|T/-|frameshift_variant;nc|ENSG00000120694|Q92598-2|HSPH1;nc|ENSG00000120694|Q92598-3|HSPH1	95.81516180277367	0.04847050768394289	4				NaN	NaN	0	NaN	7033	3123	10155
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10159	27.898	NaN	6153.8	30	0	762.22	0.106	+			16550	HEVRIQPSL	9	72	539.8031333454958	1077.5917137577915	2	539.8038940429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HEVRIQPSL_	ENSG00000145868|ENST00000340253|FBXO38;ENST00000502571.1_1_5:147784249-147790417:+|nuORF;FBXO38|p.N697Kfs*44|1|0.3|ENSG00000145868|chr5:148427376-148427377|-/A|frameshift_variant;FBXO38|p.N697Tfs*32|1|0.21|ENSG00000145868|chr5:148427377-148427377|A/-|frameshift_variant;FBXO38|p.S849Afs*20|1|0.38|ENSG00000145868|chr5:148427834-148427834|G/-|frameshift_variant;nc|ENSG00000145868|Q6PIJ6-2|FBXO38;nc|ENSG00000145868|Q6PIJ6-3|FBXO38	61.691277971877994	0.19951612995419254	4				NaN	NaN	0	NaN	7034	3123	10155
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10160	27.9	NaN	13632	30	0	2052.9	0.106	+			19904	KEFDGKSLV	9	77	511.7792743298085	1021.543995726417	2	511.7796325683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEFDGKSLV_	ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;ENST00000517330.1_1_5:77337712-77337985:-|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P;nc|ENSG00000205940|Q58FF8|HSP90AB2P	128.60217544463768	0.015992218256422188	4				NaN	NaN	0	NaN	7035	3123	10155
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10161	27.902	NaN	2679.4	30	0	194.72	0.034	+			27624	MPPYPGPGH	9	64	476.72056872779956	951.4265845223991	2	476.7203063964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MPPYPGPGH_	ENSG00000171747|ENST00000307751|LGALS4	49.21078951299608	0.3122205139198386	4				NaN	NaN	0	NaN	7036	3123	10155
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10162	27.902	NaN	35954	30	0	6296.5	0.137			+	37409	SLGGKVEL	8	88	401.7368991163723	NaN	0	401.73681640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SLGGKVEL_	REV__nc|ENSG00000196091|Q00872-7|MYBPC1	42.47446043378293	1.7418937515398478	4				NaN	NaN	0	NaN	7037	3123	10155
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10180	27.941	NaN	313600	30	0	45381	0.203	+			48198	VTAKELSLVNK	11	128	401.243004665703	1200.707184597309	3	401.2430725097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTAKELSLVNK_	ENSG00000050405|ENST00000341247|LIMA1;LIMA1|p.T536Lfs*38|2|0.4|ENSG00000050405|chr12:50177739-50177739|G/-|frameshift_variant;nc|ENSG00000050405|Q9UHB6-4|LIMA1	119.02804511558764	0.02204929902418289	4				NaN	NaN	0	NaN	7052	3126	10179
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10181	27.944	NaN	15236	30	0	3930.5	0.106			+	8348	EALAKAEL	8	66	422.74222967267593	843.4699064121519	2	422.7421569824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EALAKAEL_	REV__ENSG00000105856|ENST00000222574|HBP1;REV__nc|ENSG00000105856|O60381-3|HBP1	124.08010499294276	0.22872207833199332	4				NaN	NaN	0	NaN	7053	3126	10179
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10182	27.946	NaN	4019	30	0	432.23	0.106			+	31358	QKAQLSLGK	9	68	486.7951834694076	971.5758140056153	2	486.79522705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QKAQLSLGK_	REV__ENSG00000103852|ENST00000394132|TTC23;REV__ENST00000494567.1_1_15:99759074-99762030:-|nuORF;REV__nc|ENSG00000103852|Q5W5X9-2|TTC23;REV__nc|ENSG00000103852|Q5W5X9-3|TTC23;REV__TTC23|p.A114Pfs*47|1|0.26|ENSG00000103852|chr15:99219014-99219014|T/-|frameshift_variant	63.53385203322761	0.18415635464017938	4				NaN	NaN	0	NaN	7054	3126	10179
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10183	27.948	NaN	4715.6	30	0	3649	0.106	+			12198	GAPSGAIL	8	37	343.1988249710641	NaN	0	343.19879150390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GAPSGAIL_	ENST00000361524.7_1_18:22902141-22932115:-|nuORF;ENST00000538137.6_1_18:22930939-22932115:-|nuORF;ENST00000583005.5_1_18:22902106-22932121:-|nuORF	39.021493756699265	1.7418937515398478	4				NaN	NaN	0	NaN	7055	3126	10179
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10184	27.95	NaN	8317.2	30	0	1144.7	0.106	+			42402	TAKELSLVNK	10	79	551.8270018700164	1101.6394508068327	2	551.8278198242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TAKELSLVNK_	ENSG00000050405|ENST00000341247|LIMA1;LIMA1|p.T536Lfs*38|2|0.4|ENSG00000050405|chr12:50177739-50177739|G/-|frameshift_variant;nc|ENSG00000050405|Q9UHB6-4|LIMA1	136.5150327860613	0.011683253857074924	4				NaN	NaN	0	NaN	7056	3126	10179
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10185	27.952	NaN	1531.8	30	0	261.3	0.106	+			35388	SAQGKPLAL	9	44	442.76337714520076	883.5122013572015	2	442.7633972167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SAQGKPLAL_	ENSG00000100401|ENST00000356244|RANGAP1	54.776311868738084	0.25715957988447635	4				NaN	NaN	0	NaN	7057	3126	10179
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10186	27.953	NaN	1856.9	30	0	308.61	0.038	+			48199	VTAKELSLVNK	11	66	601.3604246321527	1200.7062963311052	2	601.362060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VTAKELSLVNK_	ENSG00000050405|ENST00000341247|LIMA1;LIMA1|p.T536Lfs*38|2|0.4|ENSG00000050405|chr12:50177739-50177739|G/-|frameshift_variant;nc|ENSG00000050405|Q9UHB6-4|LIMA1	105.35861542232443	0.049608935457698546	4				NaN	NaN	0	NaN	7058	3126	10179
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10204	27.989	NaN	5397.2	30	0	425.23	0.215	+			28856	NPVNYGRPY	9	75	540.2666394667997	1078.5187260003993	2	540.2670288085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NPVNYGRPY_	ENSG00000007520|ENST00000007390|TSR3	87.75429964447693	0.0711966946989736	4				NaN	NaN	0	NaN	7073	3129	10203
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10205	27.993	NaN	2612.2	30	0	429.96	0.106	+			24922	LKSAEAVGVK	10	67	501.3028814681746	1000.5912100031492	2	501.30255126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LKSAEAVGVK_	ENSG00000132383|ENST00000254719|RPA1;ENST00000571725.1_1_17:1747258-1757506:+|nuORF;RPA1|p.N274Mfs*5|1|0.18|ENSG00000132383|chr17:1879272-1879272|A/-|frameshift_variant	53.08895987439943	0.42869529153390606	4				NaN	NaN	0	NaN	7074	3129	10203
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10206	27.995	NaN	2661.2	30	0	630.28	0.106			+	-1	AEPCASHKRK	10	53	395.20358918825116	NaN	0	395.2396545410156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_AEPC(Carbamidomethyl (C))ASHKRK_	REV__ENST00000411702.7_1_17:78355638-78356025:+|nuORF	33.921630207806714	0.38879399011744475	4				NaN	NaN	0	NaN	7075	3129	10203
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10207	27.997	NaN	2599.2	30	0	450.96	0.106			+	767	AEEMIVLIQLK	11	49	429.58561363089467	1285.735011492884	3	429.5853271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEEMIVLIQLK_	REV__ENST00000327040.12_1_8:18730156-18793627:-|nuORF	27.64392233501311	0.6998289966465058	4				NaN	NaN	0	NaN	7076	3129	10203
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10208	27.998	NaN	1283.3	30	0	137.86	0.106			+	22433	KTLDPLGKVV	10	61	535.3339617028392	1068.6533704724784	2	535.3345947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KTLDPLGKVV_	REV__AACS|p.K234T|1|0.35|ENSG00000081760|chr12:125103015-125103015|A/C|missense_variant	28.081489160057373	0.6505064946289502	4				NaN	NaN	0	NaN	7077	3129	10203
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10209	28	NaN	1736.8	30	0	572.96	0.037			+	-1	GTSCGRAWRP	10	34	383.1844787597656	NaN	0	383.1844787597656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_GTSC(Carbamidomethyl (C))GRAWRP_	REV__nc|ENSG00000178287|Q08648-2|SPAG11B;REV__nc|ENSG00000178287|Q08648|SPAG11B;REV__nc|ENSG00000178287|Q6PDA7|SPAG11A	35.15202426646627	0.38475398474706135	4				NaN	NaN	0	NaN	7078	3129	10203
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10210	28.001	NaN	1520.6	30	0	261.45	0.139			+	48607	VTRNGIFR	8	50	481.7794289981278	961.5443050630556	2	481.7793884277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VTRNGIFR_	REV__ENSG00000185483|ENST00000371079|ROR1;REV__nc|ENSG00000185483|Q01973-3|ROR1	37.15910966729921	0.6739408393984688	4				NaN	NaN	0	NaN	7079	3129	10203
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10228	28.039	NaN	3678.4	30	0	1032.3	0.214	+			35265	SALPLKQA	8	54	414.2527687023277	826.4909844714555	2	414.2530212402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SALPLKQA_	ENSG00000140563|ENST00000357742|MCTP2;ENST00000456504.5_1_15:94858078-95022260:+|nuORF;MCTP2|p.L450Sfs*29|1|0.08|ENSG00000140563|chr15:94367650-94367651|-/AGTA|frameshift_variant;nc|ENSG00000140563|Q6DN12-2|MCTP2;nc|ENSG00000140563|Q6DN12-3|MCTP2;nc|ENSG00000140563|Q6DN12-4|MCTP2	57.81127852772723	0.5234495074909924	4				NaN	NaN	0	NaN	7094	3132	10227
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10229	28.043	NaN	1292.4	30	0	151.86	0.106	+			36773	SIAGSSIINK	10	55	495.2851867675781	NaN	0	495.2851867675781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SIAGSSIINK_	ENSG00000102780|ENST00000337343|DGKH;ENST00000498255.6_1_13:42772627-42773776:+|nuORF;nc|ENSG00000102780|Q86XP1-2|DGKH;nc|ENSG00000102780|Q86XP1-3|DGKH;nc|ENSG00000102780|Q86XP1-5|DGKH	65.46538089061403	0.18964705739380194	4				NaN	NaN	0	NaN	7095	3132	10227
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10230	28.045	NaN	4874.7	30	0	687.29	0.034	+			18951	IVQASVSLK	9	58	472.79236383056644	943.5701747279329	2	472.792236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IVQASVSLK_	ENSG00000103222|ENST00000399410|ABCC1;nc|ENSG00000103222|P33527-2|ABCC1;nc|ENSG00000103222|P33527-3|ABCC1;nc|ENSG00000103222|P33527-4|ABCC1;nc|ENSG00000103222|P33527-5|ABCC1;nc|ENSG00000103222|P33527-6|ABCC1;nc|ENSG00000103222|P33527-7|ABCC1;nc|ENSG00000103222|P33527-8|ABCC1;nc|ENSG00000103222|P33527-9|ABCC1	58.22992032128504	0.22837015374068087	4				NaN	NaN	0	NaN	7096	3132	10227
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10248	28.081	NaN	3158.3	30	0	454.09	0.214	+			22676	KVADFGLAR	9	62	488.7823607267127	975.5501685202254	2	488.78277587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVADFGLAR_	ENSG00000105976|ENST00000397752|MET;ENSG00000111816|ENST00000606080|FRK;ENSG00000125508|ENST00000217188|SRMS;ENSG00000164078|ENST00000296474|MST1R;ENSG00000197122|ENST00000373578|SRC;ENST00000411578.6_1_3:49924742-49933170:-|nuORF;ENST00000477066.5_1_20:36025122-36031779:+|nuORF;ENST00000493775.1_1_20:36030831-36031351:+|nuORF;nc|ENSG00000105976|P08581-2|MET;nc|ENSG00000111816|P42685-2|FRK;nc|ENSG00000164078|Q04912-2|MST1R;nc|ENSG00000164078|Q04912-7|MST1R;nc|ENSG00000197122|P12931-2|SRC;nc|ENSG00000197122|P12931-3|SRC	79.07001860377117	0.10156982336519868	4				NaN	NaN	0	NaN	7111	3135	10247
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10249	28.085	NaN	2526.7	30	0	499.8	0.106	+			25660	LRASWLRR	8	63	529.3219570210964	1056.6293611089927	2	529.3223876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LRASWLRR_	ENST00000255499.2_2_X:105969946-105970231:+|nuORF	64.20726635412375	0.4601301477144759	4				NaN	NaN	0	NaN	7112	3135	10247
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10250	28.087	NaN	800.35	30	0	100.97	0.031	+			42119	SYLLKPIQR	9	33	373.22772216796875	NaN	0	373.22772216796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SYLLKPIQR_	ENSG00000196155|ENST00000379344|PLEKHG4;ENST00000563969.5_1_16:67314567-67322708:+|nuORF;nc|ENSG00000196155|Q58EX7-2|PLEKHG4	16.473147378115264	0.38122769658151995	4				NaN	NaN	0	NaN	7113	3135	10247
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10268	28.122	NaN	10118	30	0	1902.9	0.215	+			6414	AVVQTLVAK	9	66	464.7947426952237	927.5749324572474	2	464.79473876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVVQTLVAK_	ENSG00000165671|ENST00000439151|NSD1;nc|ENSG00000165671|Q96L73-2|NSD1;nc|ENSG00000165671|Q96L73-3|NSD1	167.22876102047192	0.0032399547248545047	4				NaN	NaN	0	NaN	7128	3138	10267
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10269	28.125	NaN	4033.2	30	0	628.39	0.106			+	25799	LSAVDRAL	8	61	422.7478544293358	843.4811559254716	2	422.74755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSAVDRAL_	REV__ENST00000543164.5_1_12:6602847-6602940:-|nuORF	95.81516180277367	0.2598660847282228	4				NaN	NaN	0	NaN	7129	3138	10267
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10270	28.127	NaN	3110.9	30	0	577.87	0.106			+	46696	VGLCVLLA	8	45	394.2412329996355	NaN	0	394.24127197265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VGLCVLLA_	REV__ENSG00000173567|ENST00000651242|ADGRF3;REV__ENST00000459892.5_1_2:26531956-26538428:-|nuORF;REV__nc|ENSG00000173567|Q8IZF5-2|ADGRF3;REV__nc|ENSG00000173567|Q8IZF5-3|ADGRF3;REV__nc|ENSG00000173567|Q8IZF5|ADGRF3	33.49298260027079	1.7418937515398478	4				NaN	NaN	0	NaN	7130	3138	10267
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10271	28.129	NaN	1011.6	30	0	221.02	0.106			+	48075	VSSSVALV	8	35	381.22396374354315	760.4333745538863	2	381.2239074707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSSSVALV_	REV__ENSG00000177673|ENST00000313965|TEX44	57.452649787351945	0.526999880452039	4				NaN	NaN	0	NaN	7131	3138	10267
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10272	28.131	NaN	1561.3	30	0	192.12	0.035	+			37897	SPADPTRTF	9	62	496.2456948746463	990.4768368160926	2	496.2455139160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SPADPTRTF_	ENSG00000272333|ENST00000420124|KMT2B;KMT2B|p.A2538Pfs*76|1|0.42|ENSG00000272333|chr19:35737693-35737693|G/-|frameshift_variant	51.19269402634007	0.2889735674168909	4				NaN	NaN	0	NaN	7132	3138	10267
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10290	28.167	NaN	23297	30	0	8408.6	0.214	+			14504	GTCRDFILK	9	72	370.53036020725915	1108.5692512219775	3	370.53045654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GTC(Carbamidomethyl (C))RDFILK_	ENSG00000163359|ENST00000295550|COL6A3;ENST00000473258.1_1_2:238233419-238234407:-|nuORF;ENST00000491769.1_1_2:238233419-238250825:-|nuORF;nc|ENSG00000163359|P12111-2|COL6A3;nc|ENSG00000163359|P12111-4|COL6A3	88.17693792209575	0.07000514020414955	4				NaN	NaN	0	NaN	7147	3141	10289
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10291	28.17	NaN	8277.4	30	0	1085.3	0.106			+	20872	KINAYMQNK	9	66	555.2922617198399	1108.5699705064796	2	555.2929077148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KINAYMQNK_	REV__tr|U7SXZ0|U7SXZ0_FUSNUP-typeconjugativetransferproteinTrbJOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00887PE=4SV=1	49.44154591367651	0.3095138337212152	4				NaN	NaN	0	NaN	7148	3141	10289
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10292	28.172	NaN	3727.3	30	0	1443.2	0.106			+	39698	STILPSKLK	9	45	329.5461667795503	985.6166709388508	3	329.5462951660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STILPSKLK_	REV__ENSG00000021645|ENST00000335750|NRXN3;REV__nc|ENSG00000021645|Q9HDB5|NRXN3;REV__nc|ENSG00000021645|Q9Y4C0|NRXN3	44.377184641726394	0.36891676396732553	4				NaN	NaN	0	NaN	7149	3141	10289
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10293	28.174	NaN	3294	30	0	429.71	0.106			+	21361	KMASIWLRLA	10	71	594.8499219136445	1187.685290894089	2	594.85107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KMASIWLRLA_	REV__ENSG00000065621|ENST00000338595|GSTO2;REV__ENST00000467629.1_1_10:106054804-106059039:+|nuORF;REV__nc|ENSG00000065621|Q9H4Y5-2|GSTO2;REV__nc|ENSG00000065621|Q9H4Y5-3|GSTO2	49.44154591367651	0.46214596422418036	4				NaN	NaN	0	NaN	7150	3141	10289
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10294	28.176	NaN	1521.8	30	0	276.62	0.106			+	23759	LCFLSVLIF	9	58	527.803530688208	1053.5925084432158	2	527.8043823242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LCFLSVLIF_	REV__ENST00000576693.1_1_17:7506199-7507356:-|nuORF	33.51558372728122	0.4900267029546261	4				NaN	NaN	0	NaN	7151	3141	10289
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10295	28.178	NaN	2300.3	30	0	288.58	0.035	+			28019	MYGKVYRI	8	63	515.280996524236	1028.547440115272	2	515.2817993164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MYGKVYRI_	ENSG00000163882|ENST00000456318|POLR2H;ENST00000476003.1_1_3:184084469-184086079:+|nuORF;nc|ENSG00000163882|P52434-3|POLR2H;nc|ENSG00000163882|P52434-4|POLR2H	65.80317337860623	0.44433089765398776	4				NaN	NaN	0	NaN	7152	3141	10289
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10296	28.178	NaN	1195.2	30	0	120.33	0.141			+	26907	LYAKSALLYG	10	65	549.8128662109375	NaN	0	549.8128662109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LYAKSALLYG_	REV__ENSG00000108506|ENST00000251334|INTS2;REV__ENST00000583822.5_1_17:59949574-59962361:-|nuORF;REV__INTS2|p.F1100Lfs*26|2|0.29|ENSG00000108506|chr17:61867978-61867978|A/-|frameshift_variant;REV__nc|ENSG00000108506|Q9H0H0|INTS2	31.634271133179894	0.39630454568332174	4				NaN	NaN	0	NaN	7153	3141	10289
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10314	28.217	NaN	9538.7	30	0	1615.7	0.214	+			1700	AGVFVDATK	9	68	454.24835063660925	906.4821483400185	2	454.2475280761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AGVFVDATK_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	68.84614121027924	0.14577793175421136	4				NaN	NaN	0	NaN	7168	3144	10313
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10315	28.221	NaN	2120.8	30	0	192.48	0.106	+			50778	YELEVKRV	8	64	518.2951290808164	1034.5757052284328	2	518.2958374023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YELEVKRV_	ENSG00000075420|ENST00000415807|FNDC3B;ENST00000469491.5_1_3:171830269-172055226:+|nuORF;FNDC3B|p.T1056Hfs*16|1|0.43|ENSG00000075420|chr3:172378419-172378420|-/C|frameshift_variant;nc|ENSG00000075420|Q53EP0-2|FNDC3B	84.9155231211612	0.2928622555056503	4				NaN	NaN	0	NaN	7169	3144	10313
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10316	28.223	NaN	3978.7	30	0	1981.4	0.106	+			8781	EEIKEMHGL	9	55	543.2683684703549	1084.5221840075096	2	543.269287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EEIKEMHGL_	ENSG00000163170|ENST00000327428|BOLA3;ENST00000477685.5_1_2:74362722-74372610:-|nuORF	138.8255168832474	0.011031062795199845	4				NaN	NaN	0	NaN	7170	3144	10313
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10317	28.225	NaN	3708.1	30	0	1506.6	0.106				-1	VTSFKKRMF	9	42	387.2146911621094	NaN	0	387.2146911621094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_VTSFKKRM(Oxidation (M))F_	ENSG00000048052|ENST00000686413|HDAC9;HDAC9|p.D553Mfs*46|1|0.4|ENSG00000048052|chr7:18666406-18666412|CAGTGGA/-|frameshift_variant;nc|ENSG00000048052|Q9UKV0-10|HDAC9;nc|ENSG00000048052|Q9UKV0-2|HDAC9;nc|ENSG00000048052|Q9UKV0-3|HDAC9;nc|ENSG00000048052|Q9UKV0-4|HDAC9;nc|ENSG00000048052|Q9UKV0-5|HDAC9;nc|ENSG00000048052|Q9UKV0|HDAC9	34.172542307311794	0.30503706118289736	4				NaN	NaN	0	NaN	7171	3144	10313
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10318	28.227	NaN	1663	30	0	244.68	0.106	+			21250	KLKYELCR	8	54	526.7997796904921	1051.585006447784	2	526.8007202148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KLKYELCR_	nc|ENSG00000089177|Q96L93-2|KIF16B	47.657333605630114	0.6087971902037268	4				NaN	NaN	0	NaN	7172	3144	10313
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10319	28.228	NaN	974.78	30	0	101.74	0.036	+			47027	VLCPIWLDD	9	48	537.2686767578125	NaN	0	537.2686767578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VLCPIWLDD_	CD163L1|p.R215C|1|0.23|ENSG00000177675|chr12:7432539-7432539|G/A|missense_variant	26.79610172149135	0.34227917631780574	4				NaN	NaN	0	NaN	7173	3144	10313
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10320	28.229	NaN	1300.4	30	0	146.35	0.141	+			31803	QPMEVQEGY	9	44	548.7343668854094	1095.4541808376187	2	548.7352294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_QPM(Oxidation (M))EVQEGY_	ENSG00000130726|ENST00000253024|TRIM28;ENST00000601150.5_1_19:59059168-59060232:+|nuORF;nc|ENSG00000130726|Q13263-2|TRIM28	54.776311868738084	0.25715957988447635	4				NaN	NaN	0	NaN	7174	3144	10313
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10338	28.268	NaN	42628	30	0	6311.8	0.214	+			3744	ATADLALGR	9	84	444.2506898204516	886.4868267077032	2	444.2505187988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATADLALGR_	ENSG00000172037|ENST00000305544|LAMB2;ENST00000469665.1_1_3:49160056-49160527:-|nuORF	171.53180478179638	0.0025054460641941692	4				NaN	NaN	0	NaN	7189	3147	10337
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10339	28.272	NaN	3876.9	30	0	542.18	0.106	+			43135	TESDTAVRL	9	69	496.2557497315423	990.4969465298847	2	496.2557678222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TESDTAVRL_	ENSG00000067900|ENST00000399799|ROCK1;ROCK1|p.I1150Nfs*5|1|0.23|ENSG00000067900|chr18:20959903-20959904|-/T|frameshift_variant;ROCK1|p.K1307Nfs*3|1|0.28|ENSG00000067900|chr18:20953718-20953718|T/-|frameshift_variant;ROCK1|p.K818Efs*6|1|0.51|ENSG00000067900|chr18:20984387-20984388|TT/-|frameshift_variant;ROCK1|p.N871Kfs*14|1|0.07|ENSG00000067900|chr18:20979951-20979952|-/T|frameshift_variant;ROCK1|p.N871Tfs*5|1|0.29|ENSG00000067900|chr18:20979952-20979952|T/-|frameshift_variant;ROCK1|p.P1257Lfs*3|1|0.21|ENSG00000067900|chr18:20954866-20954866|G/-|frameshift_variant	106.88024417677582	0.032181361622142884	4				NaN	NaN	0	NaN	7190	3147	10337
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10340	28.274	NaN	2020.4	30	0	252.15	0.106	+			34897	SAAAVSMLK	9	51	439.2437859050971	876.4730188769943	2	439.2439880371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAAAVSMLK_	ENSG00000041357|ENST00000044462|PSMA4;nc|ENSG00000041357|P25789-2|PSMA4	63.53385203322761	0.18415635464017938	4				NaN	NaN	0	NaN	7191	3147	10337
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10341	28.276	NaN	3349.9	30	0	635.22	0.106				-1	QVRCAPAL	8	67	457.74716534297244	913.4797777527449	2	457.77386474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_QVRC(Carbamidomethyl (C))APAL_	ENST00000361927.8_1_1:184006627-184006753:-|nuORF	52.29916861842294	0.578018602984656	4				NaN	NaN	0	NaN	7192	3147	10337
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10342	28.278	NaN	1283.7	30	0	225.23	0.106			+	14280	GSVGAGHLHPF	11	58	539.7745358473811	1077.5345187615621	2	539.775634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GSVGAGHLHPF_	REV__ENST00000442496.1_1_22:37880295-37880663:-|nuORF	35.61828744233558	0.616184410043185	4				NaN	NaN	0	NaN	7193	3147	10337
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10343	28.279	NaN	2632.3	30	0	910.55	0.106	+			5195	ATTPSAVFR	9	55	475.2582361546323	948.5019193760646	2	475.7582092285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATTPSAVFR_	ENSG00000094914|ENST00000209873|AAAS;ENST00000546572.1_1_12:53702939-53703546:-|nuORF;ENST00000550033.5_1_12:53701834-53703447:-|nuORF;nc|ENSG00000094914|Q9NRG9-2|AAAS	49.44154591367651	0.3095138337212152	4				NaN	NaN	0	NaN	7194	3147	10337
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10344	28.281	NaN	1437	30	0	607.4	0.038			+	12530	GEFGVRGRGTK	11	39	388.5486145019531	NaN	0	388.5486145019531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GEFGVRGRGTK_	REV__ENST00000316341.7_1_16:67978295-67978643:-|nuORF	25.125986553469783	0.45344013546260314	4				NaN	NaN	0	NaN	7195	3147	10337
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10362	28.318	NaN	3689	30	0	582.95	0.214			+	-1	MTAGPGQHL	9	58	464.22100096148154	926.4274489897631	2	464.22100830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))TAGPGQHL_	REV__ENST00000466998.1_1_1:32042169-32043067:+|nuORF	47.657333605630114	0.33044192980041115	4				NaN	NaN	0	NaN	7210	3150	10361
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10363	28.321	NaN	4823.9	30	0	3709.9	0.033			+	-1	VAPCPSHL	8	44	440.7207071444358	879.4268613556716	2	440.7207336425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_VAPC(Carbamidomethyl (C))PSHL_	REV__ENST00000583487.1_1_17:27186296-27187766:+|nuORF	35.200714571348534	0.6875396545722289	4				NaN	NaN	0	NaN	7211	3150	10361
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10381	28.358	NaN	20564	30	0	4364.6	0.214	+			40546	SVAAPITVR	9	63	457.27649679977003	912.5384406663401	2	457.2764892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVAAPITVR_	ENSG00000170242|ENST00000527733|USP47;nc|ENSG00000170242|Q96K76-2|USP47;nc|ENSG00000170242|Q96K76|USP47;USP47|p.G1121Efs*22|2|0.29|ENSG00000170242|chr11:11948505-11948505|A/-|frameshift_variant	49.536043120802724	0.308405419312776	4				NaN	NaN	0	NaN	7226	3153	10380
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10382	28.362	NaN	11417	30	0	7248.9	0.106	+			15899	HAALETQTL	9	59	492.2612643219908	982.5079757107816	2	492.2611999511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HAALETQTL_	ENSG00000176945|ENST00000447234|MUC20;ENST00000457750.1_1_3:195341833-195346985:+|nuORF;nc|ENSG00000176945|Q8N307-3|MUC20	75.04331003522576	0.118981335847003	4				NaN	NaN	0	NaN	7227	3153	10380
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10383	28.364	NaN	13011	30	0	4654.2	0.106	+			24935	LKTTNAGNF	9	72	483.2559222528752	964.4972915725505	2	483.25592041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LKTTNAGNF_	ENST00000295900.10_1_3:63988382-63988544:+|nuORF	71.87747018426188	0.13267044672804276	4				NaN	NaN	0	NaN	7228	3153	10380
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10384	28.366	NaN	5978.4	30	0	1345.4	0.106	+			35063	SAFGGSLPAK	10	66	467.7528558656554	NaN	0	467.75286865234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SAFGGSLPAK_	ENSG00000147874|ENST00000380502|HAUS6;HAUS6|p.S530Vfs*12|1|0.3|ENSG00000147874|chr9:19063049-19063049|T/-|frameshift_variant;nc|ENSG00000147874|Q7Z4H7-2|HAUS6;nc|ENSG00000147874|Q7Z4H7-3|HAUS6	112.10723106719422	0.014941759800839057	4				NaN	NaN	0	NaN	7229	3153	10380
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10385	28.368	NaN	1740.8	30	0	126.8	0.106			+	32536	QVSLPRVALK	10	59	555.8536918448549	NaN	0	555.8531494140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QVSLPRVALK_	REV__ENSG00000163629|ENST00000411767|PTPN13;REV__nc|ENSG00000163629|Q12923-3|PTPN13;REV__nc|ENSG00000163629|Q12923-4|PTPN13;REV__PTPN13|p.K1535Sfs*16|1|0.38|ENSG00000163629|chr4:86769879-86769879|A/-|frameshift_variant;REV__PTPN13|p.N1374Mfs*7|1|0.15|ENSG00000163629|chr4:86764692-86764692|A/-|frameshift_variant;REV__PTPN13|p.T2330Qfs*13|1|0.12|ENSG00000163629|chr4:86807799-86807799|A/-|frameshift_variant	24.519189625965996	0.41966695327750003	4				NaN	NaN	0	NaN	7230	3153	10380
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10386	28.369	NaN	16199	30	0	2723.6	0.106	+			28053	NAAQTSVAY	9	69	462.72591653052734	923.4372801278547	2	462.72412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NAAQTSVAY_	ENSG00000113643|ENST00000231572|RARS1;nc|ENSG00000113643|P54136-2|RARS1	117.81106730687013	0.02252488733980868	4				NaN	NaN	0	NaN	7231	3153	10380
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10387	28.371	NaN	2840.6	30	0	481.29	0.034	+			40957	SVFYGAPSK	9	57	478.2475008888772	954.4804488445544	2	478.24761962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVFYGAPSK_	ENSG00000224389|ENST00000435363|C4B;ENSG00000244731|ENST00000428956|C4A;ENST00000468237.5_1_6:32001530-32003051:+|nuORF;ENST00000468936.5_1_6:31999682-32002424:+|nuORF;ENST00000496560.1_1_6:32001776-32002287:+|nuORF;nc|ENSG00000244731|P0C0L4-2|C4A	63.53385203322761	0.18415635464017938	4				NaN	NaN	0	NaN	7232	3153	10380
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10405	28.409	NaN	23202	30	0	5841.1	0.214	+			35885	SEERFRPSL	9	71	560.790889520779	1119.567226108358	2	560.7913208007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEERFRPSL_	CTNNA1|p.K493Nfs*31|1|0.19|ENSG00000044115|chr5:138917827-138917827|A/-|frameshift_variant;CTNNA1|p.T832*|1|0.29|ENSG00000044115|chr5:138933859-138933862|CAGA/-|frameshift_variant;ENSG00000044115|ENST00000302763|CTNNA1;ENST00000522730.1_1_5:138160461-138163428:+|nuORF;nc|ENSG00000044115|P35221-2|CTNNA1	70.8162118820467	0.13725933411854815	4				NaN	NaN	0	NaN	7247	3156	10404
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10406	28.412	NaN	7847.7	30	0	2379.5	0.106			+	3169	ASIPKAIQ	8	63	414.2527687023277	826.4909844714555	2	414.2527160644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASIPKAIQ_	REV__ENSG00000127124|ENST00000372583|HIVEP3;REV__HIVEP3|p.G2228Vfs*5|1|0.27|ENSG00000127124|chr1:41510989-41510989|C/-|frameshift_variant;REV__nc|ENSG00000127124|Q5T1R4-2|HIVEP3	54.776311868738084	0.5534952410049249	4				NaN	NaN	0	NaN	7248	3156	10404
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10407	28.414	NaN	7289	30	0	647.05	0.106	+			27249	MERIMKAQAL	10	73	595.8216275596635	1189.628702186127	2	595.8230590820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MERIMKAQAL_	ENSG00000080824|ENST00000216281|HSP90AA1;ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000378770.1_1_4:190394307-190396341:+|nuORF;ENST00000506915.1_1_4:190395906-190396341:+|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000205100|Q58FG1|HSP90AA4P	115.91470973250675	0.03309960411491346	4				NaN	NaN	0	NaN	7249	3156	10404
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10408	28.416	NaN	3928.7	30	0	461.76	0.106	+			39404	STDPNSVFR	9	62	511.7483591199265	1021.482165306653	2	511.7485046386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STDPNSVFR_	ENSG00000113240|ENST00000316308|CLK4;ENST00000519132.5_1_5:178032378-178044013:-|nuORF;ENST00000519583.5_1_5:178030620-178044013:-|nuORF;ENST00000520878.5_1_5:178030620-178044471:-|nuORF;ENST00000522136.5_1_5:178032355-178045581:-|nuORF	70.8162118820467	0.13725933411854815	4				NaN	NaN	0	NaN	7250	3156	10404
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10409	28.418	NaN	5115.9	30	0	1275.9	0.106			+	7765	DNYNVQKRV	9	55	379.2016935958453	1134.583251387736	3	379.2013244628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DNYNVQKRV_	REV__ENSG00000170004|ENST00000330494|CHD3;REV__ENST00000470531.5_3_17:7807732-7814900:+|nuORF;REV__ENST00000473376.1_1_17:7807732-7808542:+|nuORF;REV__nc|ENSG00000170004|Q12873-2|CHD3;REV__nc|ENSG00000170004|Q12873-3|CHD3	45.97224482568171	0.3502073465782774	4				NaN	NaN	0	NaN	7251	3156	10404
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10410	28.42	NaN	2276.8	30	0	690.01	0.036	+			33188	REVLPSTRL	9	68	535.8193314248446	1069.624109916489	2	535.8198852539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_REVLPSTRL_	ENSG00000197157|ENST00000354725|SND1;ENST00000489417.5_1_7:127726971-127732107:+|nuORF;GAS2L3-SND1|1|fusion	45.02220120713402	0.3613509778819777	4				NaN	NaN	0	NaN	7252	3156	10404
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10411	28.42	NaN	1779.1	30	0	325.81	0.139	+			13291	GKAFCAGG	8	42	355.6679176186785	709.321282304157	2	355.66815185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GKAFCAGG_	ENSG00000198130|ENST00000359678|HIBCH;nc|ENSG00000198130|Q6NVY1-2|HIBCH	15.63621529709179	0.7929342111279789	4				NaN	NaN	0	NaN	7253	3156	10404
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10429	28.459	NaN	12559	30	0	2948.6	0.214	+			35684	SDIKGSVL	8	66	409.73446034792823	817.4543677626565	2	409.7344055175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SDIKGSVL_	ENSG00000163956|ENST00000650182|LRPAP1;ENST00000296325.9_1_4:3514703-3533784:-|nuORF;ENST00000515119.5_1_4:3517776-3534065:-|nuORF	85.16082228582465	0.29211966821764696	4				NaN	NaN	0	NaN	7268	3159	10428
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10430	28.462	NaN	27040	30	0	9797	0.106	+			4560	ATLEETLVKK	10	62	377.89200143852315	1130.6541749157695	3	377.8919982910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATLEETLVKK_	ENSG00000254093|ENST00000314787|PINX1	83.6470233535746	0.16744595502813267	4				NaN	NaN	0	NaN	7269	3159	10428
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10431	28.464	NaN	2265.7	30	0	437.06	0.106			+	7480	DGCLEKIK	8	64	481.7521560740361	961.4897592148723	2	481.75213623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_DGC(Carbamidomethyl (C))LEKIK_	REV__tr|U7T739|U7T739_FUSNUNTPpyrophosphohydrolaseMazGputativecatalyticcoredomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00106PE=4SV=1	79.71258880314673	0.32596852995588826	4				NaN	NaN	0	NaN	7270	3159	10428
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10432	28.466	NaN	2668	30	0	1026.9	0.106			+	16761	HLVIETEQ	8	58	484.7555472911411	967.4965416490822	2	484.7559509277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HLVIETEQ_	REV__tr|U7SLP8|U7SLP8_FUSNUV-typeATPsynthasealphachainOS=FusobacteriumnucleatumCTI-5OX=1316586GN=atpAPE=3SV=1	33.51558372728122	0.7005509609380386	4				NaN	NaN	0	NaN	7271	3159	10428
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10433	28.468	NaN	1331.1	30	0	336.89	0.106	+			9613	ELNAVQSLLG	10	52	522.2898028109781	1042.5650526887562	2	522.29052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ELNAVQSLLG_	ENSG00000132792|ENST00000361383|CTNNBL1;ENST00000373465.2_1_X:46278845-46279157:-|nuORF;ENST00000373473.5_1_20:36374873-36393614:+|nuORF;nc|ENSG00000132792|Q8WYA6-4|CTNNBL1	35.15202426646627	0.5927656479315102	4				NaN	NaN	0	NaN	7272	3159	10428
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10434	28.47	NaN	2297.6	30	0	141.29	0.106			+	26075	LSLSVRAG	8	51	401.74260326971864	NaN	0	401.74267578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSLSVRAG_	REV__ENST00000549291.1_1_8:86157795-86157939:-|nuORF	53.351449002276354	1.7418937515398478	4				NaN	NaN	0	NaN	7273	3159	10428
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10435	28.472	NaN	3331.8	30	0	1549.7	0.037			+	50285	WRTSRLRIG	9	40	382.2272923066131	1143.6600475200394	3	382.227783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_WRTSRLRIG_	REV__ENST00000409291.5_1_15:44092113-44092284:+|nuORF	36.446750945000026	0.4619375763483977	4				NaN	NaN	0	NaN	7274	3159	10428
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10453	28.509	NaN	33246	30	0	2846.4	0.214			+	30330	PTSALWSY	8	89	462.72591653052734	923.4372801278547	2	463.2295837402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PTSALWSY_	REV__ENSG00000198570|ENST00000680073|RD3	40.5726180659479	0.6527593143185008	4				NaN	NaN	0	NaN	7289	3162	10452
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10454	28.513	NaN	14822	30	0	1905.5	0.106	+			16479	HETRLVEI	8	75	498.7770864611587	995.5396199891175	2	498.7772216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HETRLVEI_	ENSG00000160789|ENST00000368300|LMNA;nc|ENSG00000160789|P02545-2|LMNA;nc|ENSG00000160789|P02545-3|LMNA;nc|ENSG00000160789|P02545-4|LMNA;nc|ENSG00000160789|P02545-5|LMNA;nc|ENSG00000160789|P02545-6|LMNA	113.41158876095287	0.24327961457765637	4				NaN	NaN	0	NaN	7290	3162	10452
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10455	28.515	NaN	9590.9	30	0	1837.9	0.106	+			36434	SEVAMHSL	8	58	437.2103746411591	872.4061963491182	2	437.2101745605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEVAMHSL_	ENSG00000100290|ENST00000216115|BIK	102.7733458925114	0.2491487235419157	4				NaN	NaN	0	NaN	7291	3162	10452
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10456	28.517	NaN	2219.9	30	0	352.43	0.106			+	36797	SIDISQAI	8	52	423.73194714889337	845.4493413645868	2	423.7319641113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SIDISQAI_	REV__ENSG00000115760|ENST00000421745|BIRC6	79.45101966838831	0.3281480470254892	4				NaN	NaN	0	NaN	7292	3162	10452
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10457	28.518	NaN	3157.2	30	0	505.79	0.106	+			44420	TSLRERGS	8	58	453.24467536894815	904.4747978046963	2	453.244873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TSLRERGS_	ENSG00000124181|ENST00000685551|PLCG1;ENST00000608689.5_2_20:39801092-39811607:+|nuORF;nc|ENSG00000124181|P19174|PLCG1	37.15910966729921	0.6739408393984688	4				NaN	NaN	0	NaN	7293	3162	10452
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10458	28.52	NaN	8510.3	30	0	1205.5	0.106	+			41786	SVSQAVFAR	9	74	482.76383082418647	963.513108715173	2	482.7640075683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVSQAVFAR_	ENSG00000119042|ENST00000417098|SATB2;ENST00000483346.2_1_2:200213306-200233427:-|nuORF;nc|ENSG00000119042|Q9UPW6-2|SATB2	114.8945686534367	0.024290463251177924	4				NaN	NaN	0	NaN	7294	3162	10452
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10459	28.522	NaN	3798.9	30	0	790.8	0.033	+			35940	SEGKCFSV	8	61	428.6970884767184	855.3796240202369	2	428.69720458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SEGKCFSV_	ENSG00000079246|ENST00000392132|XRCC5;XRCC5|p.Q488Rfs*29|1|0.06|ENSG00000079246|chr2:216141305-216141305|C/-|frameshift_variant	77.31757898189308	0.345924878368729	4				NaN	NaN	0	NaN	7295	3162	10452
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10477	28.558	NaN	5108.9	30	0	2199.8	0.214	+			31778	QPIEGHAASF	10	56	528.759242612176	1055.5039322911518	2	528.7598876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QPIEGHAASF_	CLTC-CEP95|1|fusion;CLTC|p.A1374*|1|0.05|ENSG00000141367|chr17:59683464-59683465|-/TA|frameshift_variant;CLTC|p.D632Yfs*7|1|0.15|ENSG00000141367|chr17:59666589-59666590|-/TTACA|frameshift_variant;ENSG00000141367|ENST00000269122|CLTC;ENST00000472129.3_1_17:57725612-57733400:+|nuORF;nc|ENSG00000141367|Q00610-2|CLTC	44.377184641726394	0.5088115166961078	4				NaN	NaN	0	NaN	7310	3165	10476
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10478	28.562	NaN	7110	30	0	1046.8	0.106	+			48236	VTCPGVVLK	9	69	486.7810484496333	NaN	0	486.78094482421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_VTC(Carbamidomethyl (C))PGVVLK_	ENSG00000132122|ENST00000371847|SPATA6;ENST00000463938.5_1_1:48878802-48937680:-|nuORF;nc|ENSG00000132122|Q9NWH7-2|SPATA6	76.7741389293348	0.08243745921263976	4				NaN	NaN	0	NaN	7311	3165	10476
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10479	28.564	NaN	20031	30	0	12241	0.106	+			41568	SVQEYFVRK	9	59	385.87660405642123	1154.6079827694637	3	385.8768005371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVQEYFVRK_	ENSG00000163781|ENST00000260810|TOPBP1;TOPBP1|p.K1266Nfs*10|1|0.13|ENSG00000163781|chr3:133616887-133616887|T/-|frameshift_variant;TOPBP1|p.R1378Sfs*18|1|0.04|ENSG00000163781|chr3:133611043-133611044|-/AAAAGAGAATGTG|frameshift_variant;TOPBP1|p.R964Efs*12|1|0.19|ENSG00000163781|chr3:133624090-133624090|T/-|frameshift_variant	66.96192283764107	0.15557981141143568	4				NaN	NaN	0	NaN	7312	3165	10476
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10480	28.565	NaN	2357.5	30	0	247.81	0.106	+			34399	RTSGSVYITLK	11	63	612.8500192021223	1223.6854854710446	2	612.8509521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RTSGSVYITLK_	ENSG00000140319|ENST00000267884|SRP14;ENST00000558243.1_1_15:40330963-40331317:-|nuORF;ENST00000558527.5_1_15:40329525-40331317:-|nuORF;ENST00000559475.5_1_15:40329218-40331146:-|nuORF	92.23892857375223	0.08960911027004287	4				NaN	NaN	0	NaN	7313	3165	10476
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10481	28.567	NaN	1518.4	30	0	161.77	0.106	+			38610	SSGQAVFLK	9	52	468.7610778808594	NaN	0	468.7610778808594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSGQAVFLK_	ENST00000544662.1_1_12:132413858-132416816:+|nuORF	101.25262130126117	0.018912469721856617	4				NaN	NaN	0	NaN	7314	3165	10476
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10482	28.569	NaN	3252.8	30	0	763.75	0.034			+	1822	AIGGVFKTK	9	62	460.7815909017234	919.5486288702468	2	460.78155517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AIGGVFKTK_	REV__ENSG00000171914|ENST00000636159|TLN2	40.77816245573522	0.41113185337114944	4				NaN	NaN	0	NaN	7315	3165	10476
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10483	28.57	NaN	5261.6	30	0	1087.5	0.139	+			2065	ALANVSIEK	9	58	472.7741395294477	943.5337261256955	2	472.7742614746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ALANVSIEK_	ENSG00000129083|ENST00000439561|COPB1	72.87924865735499	0.12833875048249987	4				NaN	NaN	0	NaN	7316	3165	10476
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10501	28.608	NaN	4264.7	30	0	690.58	0.214			+	51207	YPQPELLY	8	70	511.7627545064939	1021.5109560797878	2	511.76312255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YPQPELLY_	REV__ENSG00000212123|ENST00000419421|PRR22	65.80317337860623	0.44433089765398776	4				NaN	NaN	0	NaN	7331	3168	10500
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10502	28.611	NaN	5097.3	30	0	578.27	0.106	+			2249	ALTLVMGPLD	10	69	515.2877608126199	1028.5609686920398	2	515.2881469726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ALTLVMGPLD_	ENSG00000008869|ENST00000233099|HEATR5B;ENST00000467978.1_1_2:37268272-37283611:-|nuORF;nc|ENSG00000008869|Q9P2D3-3|HEATR5B	51.33545320467046	0.4446945571623749	4				NaN	NaN	0	NaN	7332	3168	10500
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10503	28.613	NaN	1313.8	30	0	127	0.106	+			19628	KDIRKLLQ	8	61	507.32671366733257	1012.6388744014652	2	507.32708740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KDIRKLLQ_	ENST00000544902.5_1_13:114277566-114294579:+|nuORF	60.97194046774394	0.49215940876911696	4				NaN	NaN	0	NaN	7333	3168	10500
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10504	28.615	NaN	1578.8	30	0	204.52	0.106			+	32902	RDRLMALIS	9	51	537.8069067297997	NaN	0	537.8073120117188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RDRLMALIS_	REV__ENSG00000147697|ENST00000276708|GSDMC	61.691277971877994	0.14210560126578747	4				NaN	NaN	0	NaN	7334	3168	10500
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10505	28.617	NaN	1159.2	30	0	319.95	0.106				-1	VVHGGMSIFLK	11	34	602.3306832193584	1202.6468135055168	2	602.3316650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_VVHGGM(Oxidation (M))SIFLK_	ENST00000264995.7_1_3:131220431-131221595:-|nuORF	26.063383197487333	0.7164075632144343	4				NaN	NaN	0	NaN	7335	3168	10500
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10506	28.619	NaN	1191.1	30	0	306.82	0.035			+	13133	GGMGEPFPIT	10	51	503.2411193847656	NaN	0	503.2411193847656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GGMGEPFPIT_	REV__ENSG00000149196|ENST00000278483|HIKESHI;REV__ENST00000530208.1_1_11:86014499-86055761:+|nuORF	44.116797842482775	0.3427969396372342	4				NaN	NaN	0	NaN	7336	3168	10500
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10525	28.655	NaN	3527.7	30	0	547.12	0.215	+			13723	GQAEIIITK	9	63	486.7891842567363	971.5638155802726	2	486.7882080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GQAEIIITK_	ENSG00000174306|ENST00000683867|ZHX3;nc|ENSG00000174306|Q9H4I2-2|ZHX3;ZHX3|p.L445Sfs*3|1|0.19|ENSG00000174306|chr20:41203584-41203584|G/-|frameshift_variant	68.84614121027924	0.14577793175421136	4				NaN	NaN	0	NaN	7352	3171	10524
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10526	28.659	NaN	2122.3	30	0	377.58	0.106	+			7299	DASGAKLDY	9	71	470.2239990234375	NaN	0	470.2239990234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DASGAKLDY_	BZW1|p.N285Tfs*11|2|0.26|ENSG00000082153|chr2:200818782-200818782|A/-|frameshift_variant;BZW1|p.N286*|1|0.04|ENSG00000082153|chr2:200818790-200818791|-/T|frameshift_variant;BZW1|p.S325Rfs*19|1|0.04|ENSG00000082153|chr2:200819989-200819990|-/ACAATATAGAA|frameshift_variant;ENSG00000082153|ENST00000409600|BZW1;ENST00000464483.1_1_2:201677931-201680272:+|nuORF;nc|ENSG00000082153|Q7L1Q6-2|BZW1;nc|ENSG00000082153|Q7L1Q6-3|BZW1;nc|ENSG00000082153|Q7L1Q6-4|BZW1	44.377184641726394	0.24544280798894275	4				NaN	NaN	0	NaN	7353	3171	10524
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10527	28.661	NaN	4321.5	30	0	1716.4	0.106	+			16617	HGTVVALRY	9	62	508.2876692435421	1014.5607855538842	2	508.2879333496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HGTVVALRY_	ENSG00000110013|ENST00000263593|SIAE;nc|ENSG00000110013|Q9HAT2-2|SIAE	99.37495909608758	0.03983967222258828	4				NaN	NaN	0	NaN	7354	3171	10524
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10528	28.663	NaN	2214.4	30	0	218.02	0.106	+			27542	MPDEATPHY	9	67	530.7237981062345	1059.433043279269	2	530.7238159179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MPDEATPHY_	ENSG00000112893|ENST00000261483|MAN2A1;MAN2A1|p.D469*|1|0.33|ENSG00000112893|chr5:109781418-109781419|-/T|frameshift_variant;MAN2A1|p.F468Lfs*22|1|0.43|ENSG00000112893|chr5:109781419-109781419|T/-|frameshift_variant;MAN2A1|p.F842Lfs*16|1|0.14|ENSG00000112893|chr5:109823792-109823792|T/-|frameshift_variant;MAN2A1|p.W332Gfs*17|1|0.18|ENSG00000112893|chr5:109767687-109767687|T/-|frameshift_variant	71.29570347882199	0.13518600952103718	4				NaN	NaN	0	NaN	7355	3171	10524
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10529	28.664	NaN	2183.7	30	0	387.47	0.106	+			41655	SVQYTPVYK	9	52	542.7866821289062	NaN	0	542.7866821289062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVQYTPVYK_	ENSG00000213047|ENST00000620048|DENND1B	70.41160668669231	0.10491332661645121	4				NaN	NaN	0	NaN	7356	3171	10524
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10530	28.666	NaN	3417.3	30	0	677.82	0.106	+			46384	VELGTQPA	8	48	407.71887793415107	813.4232029351022	2	407.7188720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VELGTQPA_	ENSG00000158874|ENST00000367990|APOA2	87.75429964447693	0.2842685068779738	4				NaN	NaN	0	NaN	7357	3171	10524
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10531	28.668	NaN	2002.7	30	0	517.2	0.033	+			36740	SGVYKLPP	8	59	430.74714668439356	859.4797404355871	2	430.7470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SGVYKLPP_	ENSG00000171819|ENST00000376819|ANGPTL7	33.51558372728122	0.7005509609380386	4				NaN	NaN	0	NaN	7358	3171	10524
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10549	28.705	NaN	24566	30	0	7968.9	0.214	+			48836	VVAVGRAL	8	56	392.7554910808442	783.4964292284884	2	392.7555236816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVAVGRAL_	ENSG00000167986|ENST00000301764|DDB1;ENST00000414411.3_1_11:61081295-61081943:-|nuORF	105.26878712358291	0.24777199087279123	4				NaN	NaN	0	NaN	7373	3174	10548
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10550	28.709	NaN	18771	30	0	4887.4	0.106	+			32336	QTVAVGVIK	9	80	457.7867725516311	913.5589921700622	2	457.7867431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QTVAVGVIK_	ENSG00000101210|ENST00000217182|EEF1A2;ENSG00000156508|ENST00000309268|EEF1A1;ENST00000417549.1_1_13:28789725-28790031:+|nuORF;ENST00000436459.2_1_9:135895553-135896258:+|nuORF;ENST00000513637.1_1_5:43495177-43495438:-|nuORF;ENST00000567658.1_1_16:27144806-27145163:-|nuORF;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	42.396135135203025	0.392153681582562	4				NaN	NaN	0	NaN	7374	3174	10548
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10551	28.711	NaN	23184	30	0	8017.9	0.106	+			5323	ATVLYIVKK	9	60	345.55831054697217	1033.6531022411166	3	345.558349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATVLYIVKK_	ENSG00000113734|ENST00000351486|BNIP1;nc|ENSG00000113734|Q12981-1|BNIP1;nc|ENSG00000113734|Q12981-2|BNIP1;nc|ENSG00000113734|Q12981-3|BNIP1	77.31757898189308	0.1091473830098891	4				NaN	NaN	0	NaN	7375	3174	10548
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10552	28.713	NaN	5259	30	0	716.01	0.106	+			16386	HENIVIAKM	9	69	527.789104020338	1053.5636551074758	2	527.78955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HENIVIAKM_	ENSG00000185624|ENST00000331483|P4HB	146.78539889680295	0.007618400906539062	4				NaN	NaN	0	NaN	7376	3174	10548
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10553	28.715	NaN	4888.4	30	0	1222.6	0.106	+			18373	IQSTVMLDK	9	63	517.7806733494587	1033.5467937657172	2	517.7810668945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IQSTVMLDK_	ENSG00000115415|ENST00000361099|STAT1;nc|ENSG00000115415|P42224-2|STAT1;STAT1|p.D534Mfs*14|1|0.24|ENSG00000115415|chr2:190980653-190980653|G/-|frameshift_variant;STAT1|p.K567Nfs*25|2|0.2|ENSG00000115415|chr2:190979798-190979798|T/-|frameshift_variant	66.96192283764107	0.15557981141143568	4				NaN	NaN	0	NaN	7377	3174	10548
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10554	28.716	NaN	3638.1	30	0	949.1	0.106	+			4223	ATGDIYAMK	9	67	485.23913307745477	968.4637132217096	2	485.2389831542969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATGDIYAMK_	ENSG00000122966|ENST00000392521|CIT;nc|ENSG00000122966|O14578-2|CIT;nc|ENSG00000122966|O14578|CIT	60.11826168202944	0.21262886028301267	4				NaN	NaN	0	NaN	7378	3174	10548
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10555	28.718	NaN	3933.9	30	0	529.64	0.035	+			16029	HATTALLHY	9	61	513.7717990369658	1025.5290451407316	2	513.7718505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HATTALLHY_	ENSG00000160563|ENST00000292035|MED27;ENST00000514280.1_1_5:79646842-79647379:-|nuORF;nc|ENSG00000160563|Q6P2C8-2|MED27	119.55681237560556	0.021468056596162587	4				NaN	NaN	0	NaN	7379	3174	10548
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10573	28.756	NaN	228840	30	0	60449	0.169	+			4617	ATLNSIVAK	9	92	458.7766574996479	915.5387620660958	2	458.77630615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATLNSIVAK_	ENSG00000007944|ENST00000356840|MYLIP;MYLIP|p.K199Rfs*26|1|0.07|ENSG00000007944|chr6:16143150-16143151|-/GAATT|frameshift_variant;MYLIP|p.R317Kfs*8|1|0.09|ENSG00000007944|chr6:16145014-16145015|-/A|frameshift_variant	199.8913184727681	3.377773596966937E-05	4				NaN	NaN	0	NaN	7394	3177	10572
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10574	28.759	NaN	1825.2	30	0	655.7	0.106	+			30632	QASSAAFRY	9	45	500.7457753388826	999.4769977445652	2	500.74578857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QASSAAFRY_	ENSG00000054965|ENST00000356467|FAM168A;FAM168A|p.Y123Tfs*89|2|0.29|ENSG00000054965|chr11:73411475-73411475|G/-|frameshift_variant;nc|ENSG00000054965|Q92567|FAM168A	28.081489160057373	0.5408112046645406	4				NaN	NaN	0	NaN	7395	3177	10572
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10575	28.761	NaN	2705.8	30	0	901.85	0.106	+			4221	ATGDFVTVK	9	63	469.2530826343449	936.4916123354898	2	469.2530212402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATGDFVTVK_	AASDH|p.L440Gfs*15|1|0.11|ENSG00000157426|chr4:56354103-56354104|AA/-|frameshift_variant;ENSG00000157426|ENST00000205214|AASDH;ENST00000503808.5_1_4:57204874-57250274:-|nuORF;nc|ENSG00000157426|Q4L235-2|AASDH;nc|ENSG00000157426|Q4L235-3|AASDH;nc|ENSG00000157426|Q4L235-4|AASDH	56.43379154798735	0.2433427591689151	4				NaN	NaN	0	NaN	7396	3177	10572
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10576	28.762	NaN	6560.2	30	0	3532.5	0.106	+			37813	SMMDVDHQIAK	11	50	425.5337932746509	1273.5795504241528	3	425.5335998535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SMMDVDHQIAK_	ENSG00000150753|ENST00000280326|CCT5;ENST00000508451.1_1_5:10250422-10254994:+|nuORF	52.167168403610894	0.39337392184041037	4				NaN	NaN	0	NaN	7397	3177	10572
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10577	28.764	NaN	1891.7	30	0	144.28	0.106	+			44767	TTPELRVY	8	54	489.76663909104434	977.5187252488887	2	489.766357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TTPELRVY_	ENSG00000176566|ENST00000319675|DCAF4L2	50.0245360154114	0.5941082100236891	4				NaN	NaN	0	NaN	7398	3177	10572
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10578	28.766	NaN	2859.9	30	0	1006.9	0.106	+			47382	VPILVELDGD	10	52	535.2926069919648	1068.5706610507295	2	535.2933959960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VPILVELDGD_	CON__Q9U6Y5	27.882242232435846	0.6521336255503853	4				NaN	NaN	0	NaN	7399	3177	10572
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10579	28.768	NaN	2167.3	30	0	268.03	0.034	+			46570	VFLLEPEL	8	55	480.2744608743627	958.5343688155255	2	480.27410888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VFLLEPEL_	ENSG00000159322|ENST00000456471|ADPGK;nc|ENSG00000159322|Q9BRR6-2|ADPGK;nc|ENSG00000159322|Q9BRR6-6|ADPGK	52.29916861842294	0.578018602984656	4				NaN	NaN	0	NaN	7400	3177	10572
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10597	28.805	NaN	5784.2	30	0	594.45	0.214	+			36070	SEKAKDLIL	9	68	508.8031225195196	1015.5916921058392	2	508.80303955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEKAKDLIL_	ENSG00000112079|ENST00000229812|STK38;ENSG00000211455|ENST00000389032|STK38L;ENST00000536093.5_3_12:27468169-27475385:+|nuORF;nc|ENSG00000211455|Q9Y2H1-2|STK38L;STK38|p.F382Lfs*70|1|0.16|ENSG00000112079|chr6:36497806-36497806|A/-|frameshift_variant;STK38L|p.F383Lfs*9|1|0.1|ENSG00000211455|chr12:27319392-27319392|T/-|frameshift_variant	85.86182877749512	0.07653218437724067	4				NaN	NaN	0	NaN	7415	3180	10596
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10598	28.809	NaN	4309.3	30	0	733.6	0.106	+			28193	NASKGIYAM	9	67	477.7400057285198	NaN	0	477.7396545410156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NASKGIYAM_	ENSG00000142945|ENST00000372224|KIF2C;nc|ENSG00000142945|Q99661-2|KIF2C	58.22992032128504	0.15686832049467786	4				NaN	NaN	0	NaN	7416	3180	10596
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10599	28.811	NaN	3330	30	0	273.6	0.106	+			33756	RPSGKGIVEF	10	64	545.3063011635026	1088.598049393805	2	545.30712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RPSGKGIVEF_	ENSG00000147140|ENST00000276079|NONO;ENST00000471419.6_1_X:70511819-70517312:+|nuORF;nc|ENSG00000147140|Q15233-2|NONO	42.33807565288922	0.5276008846745733	4				NaN	NaN	0	NaN	7417	3180	10596
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10600	28.813	NaN	2935.7	30	0	935.22	0.106	+			29005	NSNTVVFVK	9	66	504.2797436050833	1006.5449342769666	2	504.27984619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NSNTVVFVK_	ENSG00000092203|ENST00000448790|TOX4;nc|ENSG00000092203|O94842-2|TOX4;nc|ENSG00000092203|O94842-3|TOX4	93.5975768576971	0.05472259948179787	4				NaN	NaN	0	NaN	7418	3180	10596
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10601	28.815	NaN	2595.9	30	0	318.14	0.106	+			26374	LTDGVGRR	8	60	437.2466112912074	NaN	0	437.2552185058594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LTDGVGRR_	CUBN|p.F2548Sfs*50|1|0.3|ENSG00000107611|chr10:16907570-16907570|A/-|frameshift_variant;CUBN|p.F3041Lfs*38|1|0.06|ENSG00000107611|chr10:16874487-16874488|-/GCTTTCTT|frameshift_variant;CUBN|p.L2960Ffs*41|1|0.39|ENSG00000107611|chr10:16888438-16888442|AAGTC/-|frameshift_variant;CUBN|p.N1904Tfs*7|1|0.22|ENSG00000107611|chr10:16938985-16938985|T/-|frameshift_variant;CUBN|p.V3542Cfs*18|1|0.17|ENSG00000107611|chr10:16828945-16828946|-/A|frameshift_variant;ENSG00000107611|ENST00000377833|CUBN	42.396135135203025	1.7418937515398478	4				NaN	NaN	0	NaN	7419	3180	10596
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10602	28.816	NaN	5488	30	0	2075.4	0.033	+			26349	LTAEVPLR	8	59	449.7728271484375	NaN	0	449.7728271484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LTAEVPLR_	ENST00000344642.6_1_1:22142525-22147999:+|nuORF	35.200714571348534	1.7418937515398478	4				NaN	NaN	0	NaN	7420	3180	10596
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10603	28.817	NaN	1484.7	30	0	117.34	0.139	+			35360	SAPMTHSPI	9	56	470.73116738102516	939.4477818288503	2	470.732177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SAPMTHSPI_	ENSG00000181143|ENST00000397910|MUC16;MUC16|p.F10843Sfs*11|1|0.22|ENSG00000181143|chr19:8938427-8938427|A/-|frameshift_variant;MUC16|p.H3632Pfs*17|1|0.13|ENSG00000181143|chr19:8965875-8965876|-/G|frameshift_variant;MUC16|p.I2885Dfs*9|1|0.28|ENSG00000181143|chr19:8972486-8972487|-/C|frameshift_variant;MUC16|p.K6604Rfs*26|1|0.27|ENSG00000181143|chr19:8956959-8956959|T/-|frameshift_variant;MUC16|p.L2546Kfs*23|1|0.04|ENSG00000181143|chr19:8973503-8973504|-/CCTT|frameshift_variant;MUC16|p.L8270Wfs*63|1|0.04|ENSG00000181143|chr19:8951962-8951963|-/ACCA|frameshift_variant;MUC16|p.N2936Tfs*6|1|0.17|ENSG00000181143|chr19:8972332-8972332|T/-|frameshift_variant;MUC16|p.N9430Tfs*13|1|0.14|ENSG00000181143|chr19:8948481-8948481|T/-|frameshift_variant;MUC16|p.S4774Ffs*12|1|0.01|ENSG00000181143|chr19:8962451-8962452|-/AC|frameshift_variant;MUC16|p.S6098Wfs*23|1|0.17|ENSG00000181143|chr19:8958477-8958478|-/GGTGACATCTCTTGGCCAACTGACCCTGGACACATCAACC|frameshift_variant;MUC16|p.S6614Lfs*30|1|0.04|ENSG00000181143|chr19:8956931-8956932|-/A|frameshift_variant;MUC16|p.S7713Lfs*5|1|0.45|ENSG00000181143|chr19:8953634-8953634|G/-|frameshift_variant;MUC16|p.T7968Nfs*2|1|0.41|ENSG00000181143|chr19:8952867-8952868|-/T|frameshift_variant;MUC16|p.T8791Qfs*38|1|0.31|ENSG00000181143|chr19:8950403-8950403|G/-|frameshift_variant	71.29570347882199	0.13518600952103718	4				NaN	NaN	0	NaN	7421	3180	10596
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10621	28.856	NaN	71545	30	0	25717	0.214	+			43566	TIAPALVSK	9	73	450.2813292758239	898.5481056184478	2	450.2814636230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TIAPALVSK_	ENO1|p.D318Mfs*5|1|0.43|ENSG00000074800|chr1:8864006-8864006|C/-|frameshift_variant;ENSG00000074800|ENST00000234590|ENO1;ENST00000464920.1_1_1:8921421-8930582:-|nuORF	78.26377905018397	0.10505600812668463	4				NaN	NaN	0	NaN	7436	3183	10620
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10622	28.86	NaN	5220	30	0	1503.4	0.106	+			19366	KALEAVFGK	9	66	481.7869632559341	961.5593735786682	2	481.78656005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KALEAVFGK_	ENSG00000147274|ENST00000320676|RBMX;ENST00000565907.1_1_X:135961433-135961586:-|nuORF;ENST00000567262.5_1_X:135958813-135961586:-|nuORF;nc|ENSG00000147274|P38159-2|RBMX;nc|ENSG00000147274|P38159-3|RBMX	81.52500206392136	0.09095445986635249	4				NaN	NaN	0	NaN	7437	3183	10620
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10623	28.862	NaN	5310.3	30	0	475.7	0.106	+			41481	SVNSVAVLR	9	65	472.7794387578311	NaN	0	472.77947998046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVNSVAVLR_	ENSG00000146830|ENST00000678049|GIGYF1;GIGYF1|p.G270Efs*75|1|0.29|ENSG00000146830|chr7:100686319-100686319|C/-|frameshift_variant;GIGYF1|p.L111Wfs*234|1|0.42|ENSG00000146830|chr7:100687547-100687547|G/-|frameshift_variant	68.84614121027924	0.11159004992091766	4				NaN	NaN	0	NaN	7438	3183	10620
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10624	28.864	NaN	8260.9	30	0	687.67	0.106	+			7780	DPEGSRITY	9	81	519.2481456037201	1036.4817382742401	2	519.2489013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DPEGSRITY_	ENSG00000124596|ENST00000424266|OARD1;ENST00000465893.1_1_6:41037763-41039373:-|nuORF	138.06239232086	0.011389075116295402	4				NaN	NaN	0	NaN	7439	3183	10620
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10625	28.865	NaN	2658.7	30	0	330.21	0.106	+			47414	VPPHGGGAL	9	50	402.7218370382577	803.4291211433155	2	402.721435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VPPHGGGAL_	ENSG00000204301|ENST00000375023|NOTCH4;ENST00000491215.1_1_6:32163216-32164008:-|nuORF;nc|ENSG00000204301|Q99466-2|NOTCH4	39.021493756699265	0.43173687394350213	4				NaN	NaN	0	NaN	7440	3183	10620
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10626	28.867	NaN	1846.8	30	0	708.27	0.106				-1	AVPGRSFM	8	50	440.7207071444358	879.4268613556716	2	440.7205505371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_AVPGRSFM(Oxidation (M))_	ENSG00000161681|ENST00000293441|SHANK1;nc|ENSG00000161681|Q9Y566-3|SHANK1;SHANK1|p.L2065Sfs*68|1|0.18|ENSG00000161681|chr19:50662259-50662259|C/-|frameshift_variant;SHANK1|p.T693Pfs*33|2|0.23|ENSG00000161681|chr19:50688940-50688940|G/-|frameshift_variant	38.80614096846853	0.6637206697844082	4				NaN	NaN	0	NaN	7441	3183	10620
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10627	28.869	NaN	4274.7	30	0	690.47	0.033	+			26504	LTMPGGVAK	9	64	437.2466112912074	NaN	0	437.2465515136719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LTMPGGVAK_	ENSG00000087266|ENST00000503393|SH3BP2;ENST00000511185.5_1_4:2814082-2826487:+|nuORF;ENST00000511237.5_1_4:2795936-2826487:+|nuORF;ENST00000511663.5_1_4:2811506-2826487:+|nuORF;nc|ENSG00000087266|P78314-2|SH3BP2;nc|ENSG00000087266|P78314-3|SH3BP2;nc|ENSG00000087266|P78314-4|SH3BP2;SH3BP2|p.P238Rfs*40|1|0.37|ENSG00000087266|chr4:2829615-2829615|C/-|frameshift_variant;SH3BP2|p.P368Qfs*21|1|0.28|ENSG00000087266|chr4:2830004-2830004|C/-|frameshift_variant;SH3BP2|p.R342Pfs*7|1|0.24|ENSG00000087266|chr4:2829924-2829925|-/C|frameshift_variant;SH3BP2|p.V381Rfs*14|1|0.18|ENSG00000087266|chr4:2830040-2830041|-/C|frameshift_variant;SH3BP2|p.V381Wfs*8|1|0.47|ENSG00000087266|chr4:2830041-2830041|C/-|frameshift_variant	49.44154591367651	0.21054156626303966	4				NaN	NaN	0	NaN	7442	3183	10620
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10644	28.904	NaN	11763	30	0	1933.4	0.214	+			42365	TAIGMPVEK	9	71	473.2571171856817	944.4996814381634	2	473.2571105957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAIGMPVEK_	ENSG00000109736|ENST00000355443|MFSD10;ENST00000509676.1_1_4:2934766-2935650:-|nuORF;MFSD10|p.S111Gfs*48|1|0.44|ENSG00000109736|chr4:2933125-2933147|GGGCGCCTCCCCAAGCAGTCAGA/-|frameshift_variant	43.650786325866115	0.37743712540499297	4				NaN	NaN	0	NaN	7456	3186	10643
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10645	28.908	NaN	3423.6	30	0	539.45	0.106	+			32954	REDEKPLVL	9	57	549.8114435461175	1097.608334159035	2	549.8116455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_REDEKPLVL_	ENSG00000090971|ENST00000205194|NAT14	42.86426827375447	0.38666266728046506	4				NaN	NaN	0	NaN	7457	3186	10643
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10646	28.91	NaN	2821.6	30	0	195.89	0.106	+			36093	SEKFIKAAI	9	60	503.80023792925925	1005.5859229253185	2	503.8003234863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEKFIKAAI_	ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A;TOP2A|p.K1199Efs*11|1|0.23|ENSG00000131747|chr17:40396408-40396409|-/C|frameshift_variant;TOP2A|p.T1205Hfs*19|4|0.35|ENSG00000131747|chr17:40396390-40396390|T/-|frameshift_variant	90.60085204095205	0.06317133949006545	4				NaN	NaN	0	NaN	7458	3186	10643
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10647	28.912	NaN	2542.9	30	0	217.61	0.106	+			51175	YPGQPHPAL	9	57	490.2532895322372	978.4920261312744	2	490.253173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YPGQPHPAL_	ENSG00000114315|ENST00000232424|HES1	71.37791200682192	0.13483053934309522	4				NaN	NaN	0	NaN	7459	3186	10643
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10648	28.913	NaN	2196.7	30	0	754.03	0.106				-1	MLPHVACM	8	49	487.7157802996958	973.4170076661916	2	487.7158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))LPHVAC(Carbamidomethyl (C))M_	ENST00000378883.5_1_20:5958531-5958585:+|nuORF	33.49298260027079	0.7007254697536482	4				NaN	NaN	0	NaN	7460	3186	10643
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10649	28.915	NaN	968.43	30	0	189.44	0.106	+			38764	SSLSSIFLIF	10	39	557.3113414379887	1112.6081299427774	2	557.3121337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSLSSIFLIF_	tr|U7T2I4|U7T2I4_FUSNUMajorfacilitatorsuperfamily(MFS)profiledomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00581PE=4SV=1	21.9598887501803	0.7004979571547932	4				NaN	NaN	0	NaN	7461	3186	10643
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10650	28.917	NaN	2291.1	30	0	810.77	0.035	+			31308	QILDPAASVT	10	56	507.7771633559374	NaN	0	507.7774963378906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QILDPAASVT_	chr10:128113602-128116491|398|11.56|0.71|4.03|-|ENST00000368653|MKI67,MKI67;ENSG00000148773|ENST00000368654|MKI67;MKI67|p.R3036Yfs*27|1|0.04|ENSG00000148773|chr10:128102735-128102736|-/AAAATAA|frameshift_variant;nc|ENSG00000148773|P46013-2|MKI67	31.529811441608018	0.39664753963064203	4				NaN	NaN	0	NaN	7462	3186	10643
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10668	28.953	NaN	4652.5	30	0	1460.3	0.214	+			9280	EHKNRMSQ	8	68	515.2491904078374	1028.4838278824748	2	515.2499389648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EHKNRMSQ_	EIF3A|p.R752Q|1|0.12|ENSG00000107581|chr10:119051263-119051263|C/T|missense_variant	64.20726635412375	0.4601301477144759	4				NaN	NaN	0	NaN	7477	3189	10667
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10669	28.957	NaN	7746.8	30	0	1921.8	0.106	+			40311	STSSVIMMK	9	58	492.2481472314553	982.4817415297106	2	492.2484130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STSSVIMMK_	ENST00000521804.1_1_8:142264568-142318349:-|nuORF	148.04295825190792	0.0073252839830139265	4				NaN	NaN	0	NaN	7478	3189	10667
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10670	28.959	NaN	1553.6	30	0	204.6	0.106	+			49986	WALSMGGKVP	10	62	523.2805948071065	NaN	0	523.2811889648438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_WALSMGGKVP_	ENSG00000086758|ENST00000262854|HUWE1;ENST00000218328.12_1_X:53611240-53681066:-|nuORF;HUWE1|p.R1657Mfs*13|1|0.21|ENSG00000086758|chrX:53585043-53585044|-/A|frameshift_variant;nc|ENSG00000086758|Q7Z6Z7-2|HUWE1;nc|ENSG00000086758|Q7Z6Z7-3|HUWE1	30.568863376406313	0.39980281766270914	4				NaN	NaN	0	NaN	7479	3189	10667
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10671	28.961	NaN	1094.3	30	0	356.05	0.106			+	17980	IHGTVYGL	8	42	430.23647370514396	NaN	0	430.23736572265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IHGTVYGL_	REV__CREBBP|p.Q2411Sfs*2|1|0.24|ENSG00000005339|chr16:3727816-3727816|G/-|frameshift_variant;REV__ENSG00000005339|ENST00000262367|CREBBP;REV__nc|ENSG00000005339|Q92793-2|CREBBP	21.70233525837049	1.7418937515398478	4				NaN	NaN	0	NaN	7480	3189	10667
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10672	28.963	NaN	1294.9	30	0	176.3	0.106			+	-1	PIVFIAFMI	9	45	533.806274177045	1065.59799542089	2	533.8070068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_PIVFIAFM(Oxidation (M))I_	REV__ENSG00000186509|ENST00000335397|OR9Q1	39.021493756699265	0.43173687394350213	4				NaN	NaN	0	NaN	7481	3189	10667
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10673	28.964	NaN	1250.8	30	0	227.94	0.033	+			24023	LEEGAHVL	8	43	434.23233808536276	866.4501232375255	2	434.73370361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LEEGAHVL_	ENSG00000160218|ENST00000291574|TRAPPC10;TRAPPC10|p.P1021Lfs*23|1|0.56|ENSG00000160218|chr21:44094123-44094123|C/-|frameshift_variant	54.76467175910256	0.5536104764165384	4				NaN	NaN	0	NaN	7482	3189	10667
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10674	28.965	NaN	1227.5	30	0	130.01	0.14				-1	PFCQFKAV	8	53	498.7527325089679	995.4909120847358	2	498.75384521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_PFC(Carbamidomethyl (C))QFKAV_	NUP54|p.R172Q|1|0.32|ENSG00000138750|chr4:76136193-76136193|C/T|missense_variant	44.53106598305862	0.628196326904373	4				NaN	NaN	0	NaN	7483	3189	10667
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10691	29.001	NaN	43673	30	0	6431.5	0.214	+			26385	LTDQVSVI	8	78	437.74773844514664	873.4809239570933	2	437.7475891113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LTDQVSVI_	ENSG00000099995|ENST00000215793|SF3A1;nc|ENSG00000099995|Q15459-2|SF3A1	101.60071028292904	0.24979566554663588	4				NaN	NaN	0	NaN	7497	3192	10690
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10692	29.005	NaN	11657	30	0	3787	0.106			+	-1	SSMLFRLQQ	9	51	375.86208367742927	1124.564421632488	3	375.86212158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_SSM(Oxidation (M))LFRLQQ_	REV__ENST00000380599.8_1_17:7369639-7369909:-|nuORF	62.107414245175825	0.1960472003779324	4				NaN	NaN	0	NaN	7498	3192	10690
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10693	29.006	NaN	3718	30	0	1253.6	0.106	+			30787	QEAEMAQNAV	10	64	545.7451403346245	1089.4757277360488	2	545.745849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QEAEMAQNAV_	ENSG00000168036|ENST00000349496|CTNNB1	126.24258497203832	0.01851300475414303	4				NaN	NaN	0	NaN	7499	3192	10690
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10694	29.008	NaN	3203	30	0	1037.7	0.106				-1	GEGRTIIHCL	10	39	385.8692269182885	1154.5858513550656	3	385.8695373535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_GEGRTIIHC(Carbamidomethyl (C))L_	ENSG00000152894|ENST00000368226|PTPRK;nc|ENSG00000152894|Q15262-3|PTPRK;nc|ENSG00000152894|Q15262-4|PTPRK;nc|ENSG00000152894|Q15262|PTPRK	23.52269567125451	0.6877354443478558	4				NaN	NaN	0	NaN	7500	3192	10690
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10695	29.01	NaN	4336.2	30	0	675.11	0.106	+			9734	ENAEAYLGK	9	69	497.74539069196504	993.4762284507301	2	497.74517822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ENAEAYLGK_	ENST00000442006.2_1_1:39174637-39175513:+|nuORF	56.43379154798735	0.2433427591689151	4				NaN	NaN	0	NaN	7501	3192	10690
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10696	29.012	NaN	2063.1	30	0	353.36	0.106	+			36450	SEVKLTVA	8	53	423.7503301299026	845.4861073266052	2	423.75006103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SEVKLTVA_	ENSG00000079691|ENST00000329474|CARMIL1;nc|ENSG00000079691|Q5VZK9-2|CARMIL1	44.377184641726394	0.6291511924298419	4				NaN	NaN	0	NaN	7502	3192	10690
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10697	29.014	NaN	1458.6	30	0	237.62	0.035			+	24764	LHYSQGAGGGA	11	50	509.24093757523826	1016.4673222172765	2	509.24102783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LHYSQGAGGGA_	REV__ENST00000445273.6_1_13:31729697-31736149:-|nuORF	30.317721548370564	0.6717830234747728	4				NaN	NaN	0	NaN	7503	3192	10690
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10713	29.047	NaN	8134.4	30	0	968.78	0.214	+			31484	QLASFTKVT	9	66	497.78213300119404	993.5497130691881	2	497.7818908691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QLASFTKVT_	ENSG00000064692|ENST00000261368|SNCAIP;ENST00000510003.5_1_5:121726829-121776497:+|nuORF;nc|ENSG00000064692|Q9Y6H5-3|SNCAIP;nc|ENSG00000064692|Q9Y6H5-4|SNCAIP;nc|ENSG00000064692|Q9Y6H5-6|SNCAIP	54.776311868738084	0.25715957988447635	4				NaN	NaN	0	NaN	7516	3195	10712
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10714	29.051	NaN	4948.4	30	0	1065.2	0.106	+			7178	DAGPPTHAF	9	62	456.7140624860719	911.4135720389438	2	456.7137451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DAGPPTHAF_	ENSG00000139946|ENST00000267460|PELI2;ENSG00000197329|ENST00000358912|PELI1	60.97194046774394	0.20551255781574032	4				NaN	NaN	0	NaN	7517	3195	10712
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10715	29.053	NaN	2614.8	30	0	1665.5	0.106	+			16600	HGIDPTGTY	9	49	480.72468218562557	959.4348114380512	2	480.7245178222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HGIDPTGTY_	ENSG00000104833|ENST00000264071|TUBB4A;ENSG00000188229|ENST00000340384|TUBB4B;ENSG00000196230|ENST00000327892|TUBB;ENST00000518096.1_1_8:30209523-30210210:+|nuORF;ENST00000604929.1_1_9:140135770-140136775:+|nuORF;TUBB|p.G142Afs*23|1|0.35|ENSG00000196230|chr6:30723483-30723483|G/-|frameshift_variant;TUBB4A|p.G141Vfs*24|2|0.35|ENSG00000104833|chr19:6496077-6496077|C/-|frameshift_variant	29.14955571784316	0.5308295550522326	4				NaN	NaN	0	NaN	7518	3195	10712
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10716	29.055	NaN	2483.1	30	0	659.95	0.106	+			26332	LSWLDGSGL	9	56	474.24655021584846	NaN	0	474.24560546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSWLDGSGL_	ENSG00000074201|ENST00000525428|CLNS1A	44.116797842482775	0.2472372736944149	4				NaN	NaN	0	NaN	7519	3195	10712
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10717	29.056	NaN	1981	30	0	511.79	0.106			+	47764	VSGSGPDKL	9	47	430.2298251235423	NaN	0	430.22943115234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSGSGPDKL_	REV__ENSG00000144893|ENST00000687756|MED12L;REV__MED12L|p.L1417Sfs*14|1|0.06|ENSG00000144893|chr3:151378044-151378044|C/-|frameshift_variant;REV__MED12L|p.N1494Rfs*10|1|0.1|ENSG00000144893|chr3:151380219-151380220|-/GAAATAATGCATT|frameshift_variant;REV__MED12L|p.T1760Pfs*44|1|0.42|ENSG00000144893|chr3:151388100-151388100|A/-|frameshift_variant;REV__nc|ENSG00000144893|Q86YW9-4|MED12L;REV__nc|ENSG00000144893|Q86YW9|MED12L	51.33545320467046	0.19748963086191895	4				NaN	NaN	0	NaN	7520	3195	10712
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10718	29.058	NaN	1458.6	30	0	424.6	0.106	+			3184	ASKIEALHK	9	30	332.8659502872214	995.5760214618642	3	332.8660583496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASKIEALHK_	ENSG00000101972|ENST00000371145|STAG2;nc|ENSG00000101972|Q8N3U4|STAG2;STAG2|p.T1208Kfs*3|1|0.87|ENSG00000101972|chrX:124095400-124095400|C/-|frameshift_variant	21.9598887501803	0.5980208138527809	4				NaN	NaN	0	NaN	7521	3195	10712
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10719	29.06	NaN	1759.7	30	0	257.32	0.032	+			29064	NTIEMQAITAL	11	38	402.2132263183594	NaN	0	402.2132263183594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NTIEMQAITAL_	ENSG00000107937|ENST00000360803|GTPBP4;nc|ENSG00000107937|Q9BZE4-2|GTPBP4;nc|ENSG00000107937|Q9BZE4-3|GTPBP4	25.125986553469783	0.45344013546260314	4				NaN	NaN	0	NaN	7522	3195	10712
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10737	29.097	NaN	12589	30	0	3299.2	0.214	+			23713	LAVDKSASL	9	78	452.2604585046669	902.5063640761338	2	452.2608947753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LAVDKSASL_	ENSG00000065526|ENST00000375759|SPEN;SPEN|p.A2105Lfs*33|1|0.46|ENSG00000065526|chr1:15932548-15932548|G/-|frameshift_variant;SPEN|p.A2251Qfs*102|3|0.29|ENSG00000065526|chr1:15932985-15932985|C/-|frameshift_variant	138.06239232086	0.011389075116295402	4				NaN	NaN	0	NaN	7537	3198	10736
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10738	29.101	NaN	1678.7	30	0	579.41	0.106			+	15880	GYRTFVVK	8	54	485.2792351676796	968.5439174021592	2	485.27923583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GYRTFVVK_	REV__ENSG00000110881|ENST00000447966|ASIC1;REV__nc|ENSG00000110881|P78348-1|ASIC1	37.15910966729921	0.6739408393984688	4				NaN	NaN	0	NaN	7538	3198	10736
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10739	29.103	NaN	3077.1	30	0	211.42	0.106	+			37045	SIRTFVPKN	9	65	531.3103060793352	1060.6060592254703	2	531.812744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SIRTFVPKN_	ENSG00000037474|ENST00000264670|NSUN2;ENST00000513888.5_1_5:6600041-6604993:-|nuORF;nc|ENSG00000037474|Q08J23-2|NSUN2;nc|ENSG00000037474|Q08J23-3|NSUN2	52.936696900407355	0.27249468807391813	4				NaN	NaN	0	NaN	7539	3198	10736
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10740	29.105	NaN	2097.6	30	0	345.7	0.106			+	37287	SLARQLHFN	9	63	543.2973928793795	1084.5802328255588	2	543.2987060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLARQLHFN_	REV__ENST00000392562.5_1_17:73389792-73400993:-|nuORF	37.15910966729921	0.4535818937225704	4				NaN	NaN	0	NaN	7540	3198	10736
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10741	29.106	NaN	2958.7	30	0	587.01	0.106	+			8021	DTPAQSGPL	9	57	443.2191041146669	884.4236552961338	2	443.2195129394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DTPAQSGPL_	ENSG00000183638|ENST00000382483|RP1L1;RP1L1|p.G2243Rfs*6|1|0.25|ENSG00000183638|chr8:10607371-10607372|-/T|frameshift_variant;RP1L1|p.V381Cfs*109|1|0.28|ENSG00000183638|chr8:10612957-10612957|C/-|frameshift_variant	54.776311868738084	0.25715957988447635	4				NaN	NaN	0	NaN	7541	3198	10736
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10742	29.108	NaN	4440.5	30	0	3172.1	0.106				-1	 	0	28	343.21705918535633	684.4195654375127	2	343.21728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7542	3198	10736
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10743	29.11	NaN	1662.8	30	0	163.77	0.034			+	16709	HLATDEWA	8	52	471.7194839830951	941.4244150329902	2	471.71923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HLATDEWA_	REV__nc|ENSG00000087460|P84996|GNAS	37.028477286268924	0.6747514403204248	4				NaN	NaN	0	NaN	7543	3198	10736
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10757	29.14	NaN	11569	30	0	1662.1	0.214	+			45818	VAIKAGTTL	9	74	437.27388584439984	872.5332187555997	2	437.2734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VAIKAGTTL_	ENSG00000166471|ENST00000528080|TMEM41B;ENST00000524543.5_1_11:9304973-9316821:-|nuORF;ENST00000533867.1_1_11:9304973-9309374:-|nuORF	75.04331003522576	0.118981335847003	4				NaN	NaN	0	NaN	7554	3201	10756
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10758	29.143	NaN	13770	30	0	5823.3	0.106	+			46386	VELGTQPAT	9	67	458.2426608808199	914.4707688284399	2	458.2423400878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VELGTQPAT_	ENSG00000158874|ENST00000367990|APOA2	167.22876102047192	0.0032399547248545047	4				NaN	NaN	0	NaN	7555	3201	10756
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10759	29.145	NaN	16048	30	0	3243.3	0.106			+	836	AEGGSPGLLP	10	76	449.2382140902395	896.4618752472791	2	449.2373352050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEGGSPGLLP_	REV__ENST00000367302.5_2_1:201592193-201592268:+|nuORF	73.97473282117947	0.24484687617201792	4				NaN	NaN	0	NaN	7556	3201	10756
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10760	29.147	NaN	9641.5	30	0	1013.9	0.106	+			16103	HDGLHVASL	9	69	474.7476516275542	947.4807503219084	2	474.747802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HDGLHVASL_	ENSG00000109046|ENST00000262394|WSB1;ENST00000467843.6_1_17:25636020-25639392:+|nuORF;nc|ENSG00000109046|Q9Y6I7-2|WSB1;nc|ENSG00000109046|Q9Y6I7-4|WSB1	76.7741389293348	0.11149722112137898	4				NaN	NaN	0	NaN	7557	3201	10756
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10761	29.149	NaN	6182.2	30	0	814.04	0.106			+	22417	KTKLGKFTQ	9	77	525.8189395369805	1049.6233261407608	2	525.8190307617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KTKLGKFTQ_	REV__ENSG00000275052|ENST00000616407|PPP4R3B;REV__nc|ENSG00000275052|Q5MIZ7-2|PPP4R3B;REV__nc|ENSG00000275052|Q5MIZ7-3|PPP4R3B;REV__nc|ENSG00000275052|Q5MIZ7-5|PPP4R3B	66.9202029811203	0.15592758990009112	4				NaN	NaN	0	NaN	7558	3201	10756
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10762	29.151	NaN	2528.3	30	0	681.1	0.106	+			40693	SVATWALL	8	54	430.7456456102466	859.4767382872932	2	430.7452392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVATWALL_	AP2A1|p.R538W|1|0.25|ENSG00000196961|chr19:49801448-49801448|C/T|missense_variant	44.53106598305862	0.628196326904373	4				NaN	NaN	0	NaN	7559	3201	10756
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10763	29.152	NaN	4088.7	30	0	551.18	0.035	+			15896	HAAHIISEL	9	70	495.7718116367428	989.5290703402857	2	495.771728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HAAHIISEL_	ENSG00000107164|ENST00000319725|FUBP3;ENST00000487406.2_1_9:133495824-133506568:+|nuORF;FUBP3|p.P395Lfs*27|2|0.27|ENSG00000107164|chr9:130630689-130630689|C/-|frameshift_variant	60.29395666154354	0.21116425950210296	4				NaN	NaN	0	NaN	7560	3201	10756
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10781	29.189	NaN	2448.1	30	0	402.85	0.215	+			17621	IEIEKGEAV	9	67	494.27185404906595	986.5291551649319	2	494.2718505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IEIEKGEAV_	CKAP5|p.K1126Rfs*25|1|0.46|ENSG00000175216|chr11:46767609-46767609|T/-|frameshift_variant;CKAP5|p.V1971Lfs*42|1|0.03|ENSG00000175216|chr11:46744211-46744212|-/TTGAAAAAAAG|frameshift_variant;ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5	75.04331003522576	0.118981335847003	4				NaN	NaN	0	NaN	7575	3204	10780
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10782	29.193	NaN	3261.2	30	0	685.95	0.106	+			10976	FEDAKEAL	8	58	461.73023502073426	921.4459171082685	2	461.7294006347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FEDAKEAL_	ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232319904-232323320:-|nuORF	60.11826168202944	0.5006107059937851	4				NaN	NaN	0	NaN	7576	3204	10780
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10783	29.195	NaN	3497.6	30	0	922.19	0.106	+			29231	NVYEVVNPK	9	58	531.285255955572	1060.5559589779439	2	531.2858276367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NVYEVVNPK_	ENSG00000139117|ENST00000331366|CPNE8	93.5975768576971	0.05472259948179787	4				NaN	NaN	0	NaN	7577	3204	10780
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10784	29.197	NaN	2333.2	30	0	1125.8	0.106	+			31352	QIYSVVLKK	9	34	359.89398182647835	NaN	0	359.8938903808594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QIYSVVLKK_	ENSG00000183486|ENST00000330714|MX2;ENST00000398632.3_1_21:42775383-42780157:+|nuORF;ENST00000482953.5_1_21:42762449-42780157:+|nuORF	19.1035232394073	0.3723251548669699	4				NaN	NaN	0	NaN	7578	3204	10780
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10785	29.198	NaN	1636.7	30	0	169.48	0.106	+			50159	WKSLADEY	8	52	506.24253829186245	1010.4705236505249	2	506.2426452636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_WKSLADEY_	ENSG00000095464|ENST00000371447|PDE6C	65.80317337860623	0.44433089765398776	4				NaN	NaN	0	NaN	7579	3204	10780
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10786	29.2	NaN	1728.2	30	0	274.61	0.106	+			11343	FLEPVRCLI	9	51	545.3083403138767	NaN	0	545.308837890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FLEPVRCLI_	ENSG00000135473|ENST00000440411|PAN2;ENST00000547994.5_1_12:56718022-56726878:-|nuORF;ENST00000551359.5_1_12:56713025-56726878:-|nuORF;nc|ENSG00000135473|Q504Q3-3|PAN2;nc|ENSG00000135473|Q504Q3|PAN2;PAN2|p.A1143Pfs*11|1|0.08|ENSG00000135473|chr12:56318384-56318384|C/-|frameshift_variant	63.53385203322761	0.134247007536971	4				NaN	NaN	0	NaN	7580	3204	10780
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10787	29.202	NaN	1396.4	30	0	595.44	0.037				-1	SLFMILWIA	9	36	370.53900146484375	NaN	0	370.53900146484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_SLFM(Oxidation (M))ILWIA_	ENST00000265187.4_1_20:5948143-5948194:+|nuORF	34.172542307311794	0.30503706118289736	4				NaN	NaN	0	NaN	7581	3204	10780
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10804	29.235	NaN	25140	30	0	5987.2	0.214	+			7580	DILFAFTA	8	84	449.2382140902395	896.4618752472791	2	449.23876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DILFAFTA_	ENSG00000168356|ENST00000302328|SCN11A;nc|ENSG00000168356|Q9UI33-3|SCN11A	45.9519527083369	0.6193794311207887	4				NaN	NaN	0	NaN	7595	3207	10803
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10805	29.239	NaN	7729.2	30	0	1814.7	0.106	+			44818	TTSNFTFSK	9	68	516.7530891536935	1031.491625374187	2	516.7537231445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTSNFTFSK_	ENSG00000160294|ENST00000291688|MCM3AP;MCM3AP|p.K492Efs*5|1|0.29|ENSG00000160294|chr21:46280545-46280546|-/C|frameshift_variant	120.27252224102466	0.02103478360410217	4				NaN	NaN	0	NaN	7596	3207	10803
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10806	29.241	NaN	4465.4	30	0	475.98	0.106			+	30522	QAHLVLLAQ	9	64	496.7976475535089	NaN	0	496.7979736328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QAHLVLLAQ_	REV__PAK4|p.S429L|1|0.38|ENSG00000130669|chr19:39175365-39175365|C/T|missense_variant	84.9155231211612	0.05454024040755679	4				NaN	NaN	0	NaN	7597	3207	10803
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10807	29.243	NaN	1537.7	30	0	200.49	0.034	+			36358	SESVASSQL	9	50	454.22203339882805	NaN	0	454.22222900390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SESVASSQL_	ENSG00000086666|ENST00000261749|ZFAND6;ENST00000561017.1_1_15:80414070-80415156:+|nuORF;nc|ENSG00000086666|Q6FIF0-2|ZFAND6	77.31757898189308	0.08057531075035683	4				NaN	NaN	0	NaN	7598	3207	10803
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10823	29.276	NaN	5803.5	30	0	1686.1	0.214	+			17611	IEGVTHAL	8	53	420.23452780031016	838.4545026674203	2	420.2345275878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IEGVTHAL_	ENSG00000136628|ENST00000366923|EPRS1	97.47269410471826	0.25484828363392314	4				NaN	NaN	0	NaN	7611	3210	10822
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10824	29.28	NaN	3907.3	30	0	411.07	0.106	+			47628	VSAPNIAMK	9	62	465.7574734732985	929.500394013397	2	465.7569885253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSAPNIAMK_	ENSG00000126883|ENST00000359428|NUP214;nc|ENSG00000126883|P35658-2|NUP214;nc|ENSG00000126883|P35658-3|NUP214;nc|ENSG00000126883|P35658-4|NUP214;nc|ENSG00000126883|P35658-5|NUP214;NUP214|p.P1285Rfs*3|1|0.28|ENSG00000126883|chr9:131197346-131197359|CCCAGGAGAACCTG/-|frameshift_variant	64.20726635412375	0.17854274437659667	4				NaN	NaN	0	NaN	7612	3210	10822
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10825	29.282	NaN	1441.9	30	0	741.63	0.106			+	24771	LIDKMIKCL	9	31	538.8137908676687	1075.6130288021373	2	538.8139038085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LIDKMIKCL_	REV__ENSG00000080824|ENST00000216281|HSP90AA1;REV__ENST00000554401.1_1_14:102549349-102551760:-|nuORF;REV__nc|ENSG00000080824|P07900-2|HSP90AA1	16.71738777980365	0.6112419832031293	4				NaN	NaN	0	NaN	7613	3210	10822
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10826	29.284	NaN	4540.6	30	0	549.45	0.106	+			20438	KEVAELTRL	9	68	529.8138430968694	1057.6131332605387	2	529.8135986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEVAELTRL_	ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1	91.26522074875469	0.06129826844580791	4				NaN	NaN	0	NaN	7614	3210	10822
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10827	29.285	NaN	1173	30	0	74.102	0.106	+			20307	KEQDIYTHL	9	50	573.7929127236456	1145.571272514091	2	573.7929077148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEQDIYTHL_	CDK5RAP2|p.L1409*|1|0.2|ENSG00000136861|chr9:120415111-120415111|A/-|frameshift_variant;CDK5RAP2|p.N746Kfs*10|1|0.2|ENSG00000136861|chr9:120458587-120458588|-/T|frameshift_variant;CDK5RAP2|p.P1012Lfs*62|1|0.27|ENSG00000136861|chr9:120443733-120443733|G/-|frameshift_variant;ENSG00000136861|ENST00000349780|CDK5RAP2;ENST00000483412.5_1_9:123170580-123298708:-|nuORF;nc|ENSG00000136861|Q96SN8-2|CDK5RAP2;nc|ENSG00000136861|Q96SN8-3|CDK5RAP2;nc|ENSG00000136861|Q96SN8-4|CDK5RAP2	95.81516180277367	0.04847050768394289	4				NaN	NaN	0	NaN	7615	3210	10822
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10828	29.287	NaN	471.59	30	0	67.368	0.106	+			17050	HQLWRGQAL	9	34	554.8040161132812	NaN	0	554.8040161132812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HQLWRGQAL_	ENST00000299164.3_1_11:130332473-130340845:+|nuORF	17.364965105453717	0.37820932774828947	4				NaN	NaN	0	NaN	7616	3210	10822
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10829	29.289	NaN	1349.5	30	0	283.2	0.034	+			32710	RAKRPGIY	8	46	480.78960846021215	NaN	0	480.78985595703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RAKRPGIY_	ENSG00000100312|ENST00000216139|ACR	28.2542754592877	1.7418937515398478	4				NaN	NaN	0	NaN	7617	3210	10822
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10843	29.318	NaN	1092	30	0	177.27	0.214	+			42879	TEHAEFLHC	9	47	543.7378139060565	NaN	0	543.7369995117188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEHAEFLHC_	DNM2|p.L793*|2|0.27|ENSG00000079805|chr19:10830206-10830206|C/-|frameshift_variant;DNM2|p.L793Pfs*31|1|0.35|ENSG00000079805|chr19:10830205-10830206|-/C|frameshift_variant;ENSG00000079805|ENST00000389253|DNM2;nc|ENSG00000079805|P50570-2|DNM2;nc|ENSG00000079805|P50570-3|DNM2;nc|ENSG00000079805|P50570-5|DNM2;nc|ENSG00000079805|P50570|DNM2	38.80614096846853	0.28164298475537564	4				NaN	NaN	0	NaN	7628	3213	10842
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10844	29.321	NaN	1897.1	30	0	155.05	0.106	+			18360	IQNNHVAR	8	58	476.26096729874763	950.5073816642953	2	476.26068115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IQNNHVAR_	ENST00000605357.5_1_7:20368428-20368995:-|nuORF	30.503639358989545	0.7238069182250283	4				NaN	NaN	0	NaN	7629	3213	10842
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10845	29.323	NaN	1967.4	30	0	218.54	0.106	+			38095	SPVCEKTLY	9	64	548.7712932229941	1095.5280335127882	2	548.7716674804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SPVC(Carbamidomethyl (C))EKTLY_	ENSG00000083857|ENST00000441802|FAT1;FAT1|p.N3847Yfs*7|1|0.03|ENSG00000083857|chr4:186601370-186601371|-/TTATA|frameshift_variant;FAT1|p.P3228Lfs*42|1|0.27|ENSG00000083857|chr4:186611556-186611556|G/-|frameshift_variant;FAT1|p.P4313Lfs*36|1|0.34|ENSG00000083857|chr4:186596602-186596602|G/-|frameshift_variant	85.16082228582465	0.07850854922700509	4				NaN	NaN	0	NaN	7630	3213	10842
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10846	29.325	NaN	9128.2	30	0	2792.9	0.034	+			39896	STLSTVISK	9	61	468.2738531566113	934.5331533800227	2	468.27362060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STLSTVISK_	ENSG00000174197|ENST00000703841|MGA;MGA|p.D2578Rfs*45|1|0.32|ENSG00000174197|chr15:41762342-41762343|-/A|frameshift_variant;MGA|p.S2228Kfs*5|1|0.33|ENSG00000174197|chr15:41750284-41750285|-/A|frameshift_variant;MGA|p.T1916Qfs*7|1|0.4|ENSG00000174197|chr15:41749350-41749350|A/-|frameshift_variant	172.24860141594272	0.002383092361811508	4				NaN	NaN	0	NaN	7631	3213	10842
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10863	29.36	NaN	15616	30	0	4715.9	0.214	+			3307	ASLTAALAK	9	66	423.2581444022334	844.5017358712669	2	423.25823974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASLTAALAK_	ENSG00000197892|ENST00000524189|KIF13B;nc|ENSG00000197892|Q9NQT8-2|KIF13B	158.07458414430337	0.004987072822166904	4				NaN	NaN	0	NaN	7645	3216	10862
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10864	29.364	NaN	12054	30	0	1423.3	0.106	+			36181	SELITKAV	8	66	430.75806392731084	859.5015749214217	2	430.7580871582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SELITKAV_	ENSG00000124575|ENST00000244534|H1-3;ENSG00000168298|ENST00000304218|H1-4;ENSG00000184357|ENST00000331442|H1-5;ENSG00000187837|ENST00000343677|H1-2	90.36981228632155	0.27635063874291205	4				NaN	NaN	0	NaN	7646	3216	10862
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10865	29.366	NaN	2439.7	30	0	276.25	0.106	+			23457	LAEEKAAVL	9	55	472.2766744731837	942.5387960131674	2	472.2768249511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LAEEKAAVL_	ENSG00000105357|ENST00000642316|MYH14;MYH14|p.L1950Sfs*14|1|0.34|ENSG00000105357|chr19:50309646-50309646|C/-|frameshift_variant;nc|ENSG00000105357|Q7Z406-6|MYH14;nc|ENSG00000105357|Q7Z406|MYH14	72.87924865735499	0.12833875048249987	4				NaN	NaN	0	NaN	7647	3216	10862
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10866	29.367	NaN	4780.1	30	0	1541.2	0.106			+	2789	ARRITEVECCL	11	54	646.8259895085554	1291.6374260839107	2	646.8275756835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ARRITEVECCL_	REV__ENSG00000110092|ENST00000227507|CCND1	19.1035232394073	0.7810393085260824	4				NaN	NaN	0	NaN	7648	3216	10862
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10867	29.369	NaN	3054.6	30	0	501.21	0.106			+	24547	LGLQLPVSV	9	49	463.28937337669254	924.5641938201851	2	463.2897033691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LGLQLPVSV_	REV__ENSG00000103657|ENST00000443617|HERC1	45.9519527083369	0.35044536499095585	4				NaN	NaN	0	NaN	7649	3216	10862
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10868	29.371	NaN	954.25	30	0	128.19	0.036	+			31487	QLCLDRLQL	9	47	551.3081665039062	NaN	0	551.3081665039062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QLCLDRLQL_	ENSG00000115207|ENST00000264720|GTF3C2	56.72105179125745	0.16330365735109603	4				NaN	NaN	0	NaN	7650	3216	10862
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10869	29.372	NaN	513.41	30	0	87.622	0.139	+			24992	LLELLDTR	8	32	486.7898254394531	NaN	0	486.7898254394531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LLELLDTR_	ENSG00000173898|ENST00000533211|SPTBN2;nc|ENSG00000173898|O15020-2|SPTBN2	23.04248740728303	1.7418937515398478	4				NaN	NaN	0	NaN	7651	3216	10862
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10885	29.406	NaN	8065.6	30	0	2120.3	0.214	+			41490	SVPDPELIK	9	64	499.2818460079334	996.5491390826668	2	499.2818908691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVPDPELIK_	ENSG00000073756|ENST00000367468|PTGS2	58.22992032128504	0.22837015374068087	4				NaN	NaN	0	NaN	7664	3219	10884
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10886	29.409	NaN	2778.1	30	0	508.3	0.106	+			7179	DAGPPTHAF	9	58	456.7140624860719	911.4135720389438	2	456.7138977050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DAGPPTHAF_	ENSG00000139946|ENST00000267460|PELI2;ENSG00000197329|ENST00000358912|PELI1	60.97194046774394	0.20551255781574032	4				NaN	NaN	0	NaN	7665	3219	10884
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10887	29.411	NaN	1469.2	30	0	338.69	0.106			+	8479	EASKLYAKM	9	53	520.775926626325	NaN	0	520.7755737304688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EASKLYAKM_	REV__ENSG00000142621|ENST00000688493|FHAD1;REV__FHAD1|p.P129Hfs*39|1|0.07|ENSG00000142621|chr1:15289478-15289478|C/-|frameshift_variant;REV__FHAD1|p.P130Tfs*99|1|0.22|ENSG00000142621|chr1:15289477-15289478|-/C|frameshift_variant;REV__nc|ENSG00000142621|B1AJZ9-3|FHAD1;REV__nc|ENSG00000142621|B1AJZ9-4|FHAD1;REV__nc|ENSG00000142621|B1AJZ9|FHAD1	35.61828744233558	0.29773779453147337	4				NaN	NaN	0	NaN	7666	3219	10884
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10888	29.413	NaN	2058.3	30	0	710.07	0.106				-1	CSSGLVFVR	9	53	512.7644392314425	NaN	0	512.7651977539062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_C(Carbamidomethyl (C))SSGLVFVR_	ENSG00000141458|ENST00000269228|NPC1;ENST00000540608.5_1_18:21119776-21166285:-|nuORF;nc|ENSG00000141458|O15118-2|NPC1;NPC1|p.C799Lfs*7|1|0.36|ENSG00000141458|chr18:23541186-23541187|-/A|frameshift_variant;NPC1|p.F1207Lfs*35|1|0.33|ENSG00000141458|chr18:23533488-23533488|A/-|frameshift_variant;NPC1|p.G993Efs*4|1|0.22|ENSG00000141458|chr18:23538605-23538605|C/-|frameshift_variant	29.14955571784316	0.3303970763161698	4				NaN	NaN	0	NaN	7667	3219	10884
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10889	29.415	NaN	2687.7	30	0	651.43	0.106	+			47756	VSGPTLLAK	9	56	443.2738157211197	884.5330785090395	2	443.2732238769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSGPTLLAK_	ENSG00000126790|ENST00000247194|L3HYPDH;ENST00000527981.1_1_14:59950407-59951094:-|nuORF	60.11826168202944	0.21262886028301267	4				NaN	NaN	0	NaN	7668	3219	10884
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10890	29.417	NaN	3332.3	30	0	795.18	0.106	+			4003	ATCELPLAK	9	59	501.76781456049576	1001.5210761877916	2	501.7682189941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_ATC(Carbamidomethyl (C))ELPLAK_	ENSG00000148450|ENST00000376510|MSRB2	90.36981228632155	0.0638227155548745	4				NaN	NaN	0	NaN	7669	3219	10884
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10891	29.418	NaN	1102.5	30	0	78.31	0.036			+	32840	RCPLHILLT	9	54	533.31640625	NaN	0	533.31640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RCPLHILLT_	REV__ENST00000449259.1_1_2:65131264-65131681:-|nuORF	18.324413293986947	0.3749620627292244	4				NaN	NaN	0	NaN	7670	3219	10884
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10909	29.456	NaN	49755	30	0	17242	0.214	+			40668	SVASISLTK	9	76	453.2685181851913	904.5224834371826	2	453.2682800292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVASISLTK_	ENST00000298289.6_1_14:50085755-50087389:-|nuORF	167.22876102047192	0.0032399547248545047	4				NaN	NaN	0	NaN	7685	3222	10908
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10910	29.46	NaN	4104.9	30	0	1345.2	0.106	+			49898	VYTTMAEHF	9	58	557.7476829355326	1113.480812937865	2	557.7476196289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_VYTTM(Oxidation (M))AEHF_	ENSG00000117472|ENST00000372003|TSPAN1;TSPAN1|p.T119M|1|0.33|ENSG00000117472|chr1:46184801-46184801|C/T|missense_variant	147.69337715509954	0.007406765731929437	4				NaN	NaN	0	NaN	7686	3222	10908
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10911	29.462	NaN	3251.6	30	0	493.12	0.106	+			2590	AQGAVFLGK	9	61	445.75849428799023	889.5024356427805	2	445.7579650878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AQGAVFLGK_	ENSG00000073803|ENST00000265026|MAP3K13;ENST00000433092.5_1_3:185155245-185169222:+|nuORF;ENST00000477582.1_1_3:185155245-185161425:+|nuORF;MAP3K13|p.P645Lfs*19|1|0.35|ENSG00000073803|chr3:185473261-185473261|C/-|frameshift_variant;MAP3K13|p.V334Lfs*14|1|0.29|ENSG00000073803|chr3:185447932-185447932|A/-|frameshift_variant;nc|ENSG00000073803|O43283-4|MAP3K13	104.74654710444128	0.034358562718640136	4				NaN	NaN	0	NaN	7687	3222	10908
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10912	29.463	NaN	772.15	30	0	230.36	0.03				-1	 	0	26	322.21162632087965	642.4086997085593	2	322.21197509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7688	3222	10908
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10930	29.499	NaN	18262	30	0	4909.9	0.214	+			19360	KALDFIASK	9	79	496.79277502841165	991.5709971236233	2	496.7923889160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KALDFIASK_	ACTN1|p.N119Efs*3|1|0.38|ENSG00000072110|chr14:68912228-68912229|-/TC|frameshift_variant;ENSG00000072110|ENST00000394419|ACTN1;ENSG00000130402|ENST00000252699|ACTN4;ENSG00000248746|ENST00000513398|ACTN3;ENST00000502692.5_1_11:66313918-66328094:+|nuORF;ENST00000513398.1_1_11:66314411-66328094:+|nuORF;ENST00000588618.5_1_19:39138385-39212431:+|nuORF;nc|ENSG00000072110|P12814-2|ACTN1;nc|ENSG00000072110|P12814-4|ACTN1;nc|ENSG00000072110|P12814|ACTN1	162.63603312974413	0.004023911058767669	4				NaN	NaN	0	NaN	7703	3225	10929
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10931	29.503	NaN	7076.2	30	0	2344.7	0.106			+	30174	PSGKLSAPGP	10	66	455.75309894317684	909.4916449531537	2	455.75311279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PSGKLSAPGP_	REV__ENST00000259523.10_1_8:128748556-128750522:+|nuORF;REV__ENST00000524013.1_1_8:128748556-128750522:+|nuORF	42.86426827375447	0.522752283233888	4				NaN	NaN	0	NaN	7704	3225	10929
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10932	29.505	NaN	3805.4	30	0	1043.7	0.106	+			4004	ATCELPLAK	9	54	501.76781456049576	1001.5210761877916	2	501.7677917480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_ATC(Carbamidomethyl (C))ELPLAK_	ENSG00000148450|ENST00000376510|MSRB2	118.74307786436346	0.02196067127630568	4				NaN	NaN	0	NaN	7705	3225	10929
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10933	29.507	NaN	3916.7	30	0	670.28	0.106	+			46279	VEIAAKNL	8	51	429.2576904296875	NaN	0	429.2576904296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VEIAAKNL_	ENSG00000161533|ENST00000293217|ACOX1;nc|ENSG00000161533|Q15067-3|ACOX1;nc|ENSG00000161533|Q15067|ACOX1	74.25504064058377	1.7418937515398478	4				NaN	NaN	0	NaN	7706	3225	10929
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10934	29.509	NaN	2353.7	30	0	231.94	0.106	+			18680	ITALAPSTMK	10	60	516.79232111035	NaN	0	516.7915649414062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ITALAPSTMK_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000184009|ENST00000573283|ACTG1;ENST00000415776.1_1_Y:19868883-19869072:-|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000493945.5_1_7:5567381-5567853:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2	80.45461616416974	0.09722466730825292	4				NaN	NaN	0	NaN	7707	3225	10929
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10935	29.51	NaN	1312.6	30	0	117.89	0.106			+	-1	LTLKMRAK	8	52	488.8004039128383	NaN	0	488.8004150390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_LTLKM(Oxidation (M))RAK_	REV__ENSG00000124212|ENST00000244043|PTGIS;REV__PTGIS|p.D119A|1|0.34|ENSG00000124212|chr20:49547862-49547862|T/G|missense_variant;REV__PTGIS|p.F356Sfs*34|1|0.5|ENSG00000124212|chr20:49513221-49513221|G/-|frameshift_variant	27.882242232435846	1.7418937515398478	4				NaN	NaN	0	NaN	7708	3225	10929
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10936	29.512	NaN	1340	30	0	182.36	0.036				-1	EMHIKAIQI	9	46	549.8012084960938	NaN	0	549.8012084960938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_EM(Oxidation (M))HIKAIQI_	ENSG00000062725|ENST00000083182|APPBP2	40.77816245573522	0.2702456086868081	4				NaN	NaN	0	NaN	7709	3225	10929
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10955	29.55	NaN	10138	30	0	4506.2	0.214	+			25901	LSGGNWDSI	9	65	474.72453644077916	947.4345199483583	2	474.7245178222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSGGNWDSI_	ENSG00000071242|ENST00000265678|RPS6KA2;ENST00000509742.1_1_6:166826252-166837415:-|nuORF;nc|ENSG00000071242|Q15349-2|RPS6KA2;nc|ENSG00000071242|Q15349-3|RPS6KA2	99.37495909608758	0.03983967222258828	4				NaN	NaN	0	NaN	7725	3228	10954
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10956	29.554	NaN	4524.7	30	0	1754	0.106	+			13190	GIANATPIPG	10	58	455.75309894317684	909.4916449531537	2	455.7530517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GIANATPIPG_	ENSG00000128881|ENST00000267890|TTBK2;nc|ENSG00000128881|Q6IQ55-2|TTBK2;nc|ENSG00000128881|Q6IQ55-3|TTBK2;TTBK2|p.N876Kfs*2|2|0.34|ENSG00000128881|chr15:42752618-42752619|-/T|frameshift_variant	54.776311868738084	0.41334902933431344	4				NaN	NaN	0	NaN	7726	3228	10954
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10957	29.556	NaN	2903.6	30	0	451.9	0.034	+			10990	FEGKDMAAV	9	60	484.23131733710864	966.4480817410173	2	484.7332458496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FEGKDMAAV_	ENSG00000149591|ENST00000392951|TAGLN;ENST00000533863.1_2_11:117074025-117074655:+|nuORF	42.86426827375447	0.38666266728046506	4				NaN	NaN	0	NaN	7727	3228	10954
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10975	29.592	NaN	4792.5	30	0	1252.4	0.214	+			37087	SISISVAR	8	49	416.7477083442382	831.4808637552765	2	416.7478942871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SISISVAR_	CON__P04264;ENSG00000167768|ENST00000252244|KRT1	82.24051045832904	0.30490469762271794	4				NaN	NaN	0	NaN	7742	3231	10974
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10976	29.596	NaN	2460.6	30	0	473.87	0.106	+			11937	FVHPKPVSL	9	51	512.3028434610555	1022.5911339889111	2	512.3034057617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FVHPKPVSL_	ENSG00000175727|ENST00000319080|MLXIP;ENST00000541750.1_12:122618368-122620257:+|nuORF;MLXIP|p.V645Rfs*84|1|0.4|ENSG00000175727|chr12:122135561-122135562|-/C|frameshift_variant;nc|ENSG00000175727|Q9HAP2-2|MLXIP;nc|ENSG00000175727|Q9HAP2-3|MLXIP;nc|ENSG00000175727|Q9HAP2-4|MLXIP;nc|ENSG00000175727|Q9HAP2-5|MLXIP	82.24051045832904	0.08786059719216216	4				NaN	NaN	0	NaN	7743	3231	10974
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10977	29.598	NaN	3285.7	30	0	385.42	0.106	+			9242	EGTVLLVKR	9	60	507.8189553605952	1013.6233577879905	2	507.8192138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EGTVLLVKR_	ENST00000602725.5_1_1:32373003-32373081:-|nuORF	82.7504851949679	0.08565546331141553	4				NaN	NaN	0	NaN	7744	3231	10974
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10978	29.6	NaN	938.44	30	0	157.21	0.106				-1	HSMDMKFTY	9	40	588.24755859375	NaN	0	588.24755859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_HSM(Oxidation (M))DMKFTY_	ENSG00000116016|ENST00000263734|EPAS1	30.317721548370564	0.32449924987115025	4				NaN	NaN	0	NaN	7745	3231	10974
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10979	29.602	NaN	734.93	30	0	511.16	0.106				-1	TVLINIILS	9	20	343.2171325683594	NaN	0	343.2171325683594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))TVLINIILS_	ENST00000465643.1_1_7:40132349-40134576:+|nuORF	14.137123925751023	0.3891339986947948	4				NaN	NaN	0	NaN	7746	3231	10974
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10980	29.603	NaN	1310.2	30	0	123.49	0.034			+	-1	FTVCVGDGV	9	48	477.2236022949219	NaN	0	477.2236022949219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_FTVC(Carbamidomethyl (C))VGDGV_	REV__BBS12|p.E561Kfs*77|1|0.35|ENSG00000181004|chr4:122743567-122743567|A/-|frameshift_variant;REV__ENSG00000181004|ENST00000314218|BBS12	37.15910966729921	0.2899585034171616	4				NaN	NaN	0	NaN	7747	3231	10974
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10981	29.604	NaN	1147.4	30	0	177.79	0.143	+			17318	IAFWLQWF	8	31	370.8635076735196	NaN	0	370.8636169433594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IAFWLQWF_	ENSG00000134489|ENST00000256906|HRH4;nc|ENSG00000134489|Q9H3N8-2|HRH4	25.450171626174864	1.7418937515398478	4				NaN	NaN	0	NaN	7748	3231	10974
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10999	29.643	NaN	18671	30	0	4644.1	0.214	+			4189	ATFPDPNVK	9	69	494.7586325213616	987.5027121095233	2	494.75836181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATFPDPNVK_	ENSG00000158773|ENST00000368021|USF1;ENST00000491629.5_1_1:161011414-161013065:-|nuORF;ENST00000529476.1_1_1:161011414-161013065:-|nuORF;USF1|p.G130Vfs*33|3|0.3|ENSG00000158773|chr1:161041734-161041734|C/-|frameshift_variant	98.58198989935565	0.04066992115528678	4				NaN	NaN	0	NaN	7763	3234	10998
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11000	29.647	NaN	9761.4	30	0	3509.6	0.106	+			47439	VPTDEARAF	9	74	503.2536402394968	1004.4927275457936	2	503.2535400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VPTDEARAF_	ENSG00000103769|ENST00000261890|RAB11A;ENSG00000185236|ENST00000328024|RAB11B;nc|ENSG00000103769|P62491-2|RAB11A;nc|ENSG00000185236|Q15907-2|RAB11B	136.26810882979174	0.012230845423532208	4				NaN	NaN	0	NaN	7764	3234	10998
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11001	29.649	NaN	2948.6	30	0	747.11	0.106	+			22071	KSLDLVTMK	9	56	517.7988926937176	1033.583232454235	2	517.7994995117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KSLDLVTMK_	ENSG00000125354|ENST00000394610|SEPTIN6;ENSG00000138758|ENST00000264893|SEPTIN11;ENSG00000164402|ENST00000378719|SEPTIN8;ENST00000371478.2_1_5:132097291-132101152:-|nuORF;nc|ENSG00000125354|Q14141-3|SEPTIN6;nc|ENSG00000125354|Q14141-4|SEPTIN6;nc|ENSG00000125354|Q14141|SEPTIN6;nc|ENSG00000138758|Q9NVA2-2|SEPTIN11;nc|ENSG00000164402|Q92599-2|SEPTIN8;nc|ENSG00000164402|Q92599-3|SEPTIN8;nc|ENSG00000164402|Q92599-4|SEPTIN8	123.20810148215591	0.019257656778428764	4				NaN	NaN	0	NaN	7765	3234	10998
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11002	29.651	NaN	5093.1	30	0	805.92	0.106			+	48243	VTCSVRLL	8	53	445.75849428799023	889.5024356427805	2	445.7597351074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTCSVRLL_	REV__ENSG00000179832|ENST00000326134|MROH1;REV__ENST00000536221.1_8:145474248-145485625:+|nuORF;REV__nc|ENSG00000179832|Q8NDA8-3|MROH1	37.15910966729921	0.6739408393984688	4				NaN	NaN	0	NaN	7766	3234	10998
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11003	29.652	NaN	16250	30	0	7817.7	0.106	+			29083	NTMNITISK	9	67	511.27061555596026	1020.5266781787205	2	511.2707214355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NTMNITISK_	ENSG00000129003|ENST00000644861|VPS13C;nc|ENSG00000129003|Q709C8-2|VPS13C;nc|ENSG00000129003|Q709C8-3|VPS13C;nc|ENSG00000129003|Q709C8-4|VPS13C;VPS13C|p.E2463Nfs*18|1|0.25|ENSG00000129003|chr15:61920157-61920157|C/-|frameshift_variant;VPS13C|p.N3163Sfs*6|1|0.05|ENSG00000129003|chr15:61882732-61882733|-/TTATCATCAC|frameshift_variant;VPS13C|p.P3597Lfs*3|1|0.26|ENSG00000129003|chr15:61868732-61868732|G/-|frameshift_variant	159.33581866081465	0.004693099277440949	4				NaN	NaN	0	NaN	7767	3234	10998
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11004	29.654	NaN	4361.8	30	0	990.47	0.038	+			40030	STMVDVRVMK	10	32	389.20698535966864	1164.599126679206	3	389.2070617675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STMVDVRVMK_	ENSG00000085224|ENST00000373344|ATRX;nc|ENSG00000085224|P46100-2|ATRX;nc|ENSG00000085224|P46100-3|ATRX;nc|ENSG00000085224|P46100-4|ATRX;nc|ENSG00000085224|P46100-5|ATRX	41.42661286455405	0.5359995577334734	4				NaN	NaN	0	NaN	7768	3234	10998
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11005	29.655	NaN	2445.5	30	0	385.34	0.141	+			28757	NPASGEKFAY	10	59	542.2590406485795	1082.5035283639588	2	542.7617797851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NPASGEKFAY_	ENSG00000001630|ENST00000003100|CYP51A1;ENST00000419457.1_1_13:29296686-29297403:-|nuORF;nc|ENSG00000001630|Q16850-2|CYP51A1	93.5975768576971	0.11047702954938905	4				NaN	NaN	0	NaN	7769	3234	10998
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11023	29.693	NaN	29957	30	0	11586	0.214	+			45033	TVGDVLEAK	9	69	466.25816963205443	930.5017863309089	2	466.2581787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVGDVLEAK_	ENSG00000106348|ENST00000338791|IMPDH1;ENST00000418838.1_1_X:40219448-40219874:-|nuORF;ENST00000440965.1_1_2:202003207-202003609:-|nuORF;IMPDH1|p.A247Gfs*7|1|0.06|ENSG00000106348|chr7:128398490-128398491|-/C|frameshift_variant;nc|ENSG00000106348|P20839-2|IMPDH1;nc|ENSG00000106348|P20839-3|IMPDH1;nc|ENSG00000106348|P20839-4|IMPDH1;nc|ENSG00000106348|P20839-5|IMPDH1;nc|ENSG00000106348|P20839-7|IMPDH1;nc|ENSG00000106348|P20839|IMPDH1	91.26522074875469	0.06129826844580791	4				NaN	NaN	0	NaN	7784	3237	11022
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11024	29.697	NaN	22637	30	0	9521.1	0.106	+			13529	GLREQLELFQ	10	80	411.5592089956859	1231.6557975872577	3	411.5591735839844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GLREQLELFQ_	ENSG00000107937|ENST00000360803|GTPBP4;nc|ENSG00000107937|Q9BZE4-2|GTPBP4;nc|ENSG00000107937|Q9BZE4-3|GTPBP4	34.172542307311794	0.6007644933930345	4				NaN	NaN	0	NaN	7785	3237	11022
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11025	29.699	NaN	3767.6	30	0	827.28	0.106			+	29967	PNWFLFAKQ	9	76	575.8056093570555	1149.5966657809108	2	576.3194580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PNWFLFAKQ_	REV__nc|ENSG00000163288|P18505-2|GABRB1	38.80614096846853	0.43426287593479557	4				NaN	NaN	0	NaN	7786	3237	11022
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11026	29.7	NaN	5047	30	0	756.75	0.106	+			44059	TPSEPHPVL	9	70	488.7583817632334	975.5022105932668	2	488.7584228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TPSEPHPVL_	ENSG00000198492|ENST00000373812|YTHDF2;ENST00000604759.1_1_14:39684672-39685536:+|nuORF;nc|ENSG00000198492|Q9Y5A9-2|YTHDF2;YTHDF2|p.F459Sfs*15|1|0.27|ENSG00000198492|chr1:28743643-28743643|T/-|frameshift_variant	94.00642277110589	0.05356993013874309	4				NaN	NaN	0	NaN	7787	3237	11022
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11027	29.702	NaN	3479.5	30	0	411.64	0.106	+			39165	SSVVPSVYK	9	64	483.26836501584734	964.5221770984947	2	483.26873779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSVVPSVYK_	ENSG00000159592|ENST00000355105|GPBP1L1	76.16968421966216	0.11411088698345859	4				NaN	NaN	0	NaN	7788	3237	11022
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11028	29.704	NaN	3498.1	30	0	321.51	0.033	+			7732	DLTKVSVL	8	60	437.76590482589506	873.5172567185901	2	437.76580810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DLTKVSVL_	ENST00000215906.5_1_22:26839892-26840330:+|nuORF	60.97194046774394	0.49215940876911696	4				NaN	NaN	0	NaN	7789	3237	11022
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11029	29.705	NaN	6217.1	30	0	1491.9	0.142			+	26115	LSPATVTLPEP	11	56	375.5450211706664	1123.6132341121993	3	375.54541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSPATVTLPEP_	REV__ENSG00000169398|ENST00000696786|PTK2;REV__nc|ENSG00000169398|Q05397-2|PTK2;REV__nc|ENSG00000169398|Q05397-3|PTK2;REV__nc|ENSG00000169398|Q05397-4|PTK2;REV__nc|ENSG00000169398|Q05397-5|PTK2;REV__nc|ENSG00000169398|Q05397-7|PTK2;REV__nc|ENSG00000169398|Q05397|PTK2;REV__PTK2|p.P912Lfs*17|2|0.43|ENSG00000169398|chr8:140668399-140668399|G/-|frameshift_variant	26.69291269510374	0.70980431218767	4				NaN	NaN	0	NaN	7790	3237	11022
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11047	29.744	NaN	12281	30	0	3289.2	0.214	+			15516	GVCSTLTIK	9	59	489.7675584846526	977.5205640361053	2	489.7675476074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GVC(Carbamidomethyl (C))STLTIK_	ENST00000589011.1_1_7:20201474-20224697:-|nuORF	93.1432384553994	0.056003526918089595	4				NaN	NaN	0	NaN	7805	3240	11046
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11048	29.748	NaN	7722.8	30	0	1345	0.106	+			38841	SSNLFVTGK	9	72	476.75837917119964	951.5022054091993	2	476.7582702636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSNLFVTGK_	ENST00000451596.2_1_9:74929993-74930062:+|nuORF	162.63603312974413	0.004023911058767669	4				NaN	NaN	0	NaN	7806	3240	11046
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11049	29.75	NaN	9303.7	30	0	4975.4	0.106	+			32238	QTFQRIFTK	9	49	390.2206151052991	1167.6400159160974	3	390.2205810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QTFQRIFTK_	ENSG00000101310|ENST00000650089|SEC23B	27.047317107675042	0.5504760921104335	4				NaN	NaN	0	NaN	7807	3240	11046
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11050	29.751	NaN	2732.2	30	0	511.52	0.106	+			30140	PRYIMAGFPV	10	63	575.8056093570555	1149.5966657809108	2	575.8056030273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PRYIMAGFPV_	ENSG00000174840|ENST00000311180|PDE12;nc|ENSG00000174840|Q6L8Q7-2|PDE12	45.9519527083369	0.4943008177357963	4				NaN	NaN	0	NaN	7808	3240	11046
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11051	29.753	NaN	2057.9	30	0	831.78	0.106			+	-1	PLLLPDLCD	9	60	528.2769481659327	NaN	0	527.9423217773438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_PLLLPDLC(Carbamidomethyl (C))D_	REV__ENST00000470853.1_1_7:86541162-86542454:-|nuORF	25.450171626174864	0.34907449758287085	4				NaN	NaN	0	NaN	7809	3240	11046
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11052	29.755	NaN	846.62	30	0	109.82	0.106			+	49510	VWKSNNDG	8	41	460.2184048462066	NaN	0	460.21844482421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VWKSNNDG_	REV__ENSG00000140575|ENST00000268182|IQGAP1;REV__IQGAP1|p.N941Ifs*8|1|0.43|ENSG00000140575|chr15:90476693-90476693|A/-|frameshift_variant;REV__IQGAP1|p.S1529Afs*10|1|0.15|ENSG00000140575|chr15:90492665-90492665|A/-|frameshift_variant	37.15910966729921	1.7418937515398478	4				NaN	NaN	0	NaN	7810	3240	11046
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11053	29.757	NaN	835.2	30	0	103.08	0.035			+	24716	LHLGKYVGSA	10	52	522.79541015625	NaN	0	522.79541015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LHLGKYVGSA_	REV__ENSG00000120616|ENST00000319778|EPC1;REV__EPC1|p.V808Rfs*9|1|0.18|ENSG00000120616|chr10:32271569-32271570|AC/-|frameshift_variant;REV__nc|ENSG00000120616|Q9H2F5-3|EPC1;REV__nc|ENSG00000120616|Q9H2F5|EPC1	26.69291269510374	0.4125295221340092	4				NaN	NaN	0	NaN	7811	3240	11046
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11071	29.794	NaN	28308	30	0	7667	0.214	+			28440	NEVPVKEL	8	71	464.26074038357643	926.5069278339529	2	464.2606506347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NEVPVKEL_	ENSG00000108829|ENST00000225972|LRRC59	157.32903759742106	0.1177781622133242	4				NaN	NaN	0	NaN	7826	3243	11070
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11072	29.798	NaN	9728.5	30	0	2919.8	0.106	+			4674	ATLSDLKTMEK	11	57	412.8879793612496	1235.642108683949	3	412.8882141113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATLSDLKTMEK_	ENSG00000129566|ENST00000262715|TEP1;nc|ENSG00000129566|Q99973-2|TEP1;TEP1|p.K1597Sfs*14|1|0.27|ENSG00000129566|chr14:20380448-20380448|T/-|frameshift_variant;TEP1|p.L888Wfs*31|1|0.45|ENSG00000129566|chr14:20387928-20387928|G/-|frameshift_variant;TEP1|p.N507Efs*11|1|0.29|ENSG00000129566|chr14:20401014-20401015|-/C|frameshift_variant;TEP1|p.R392Afs*22|1|0.27|ENSG00000129566|chr14:20403743-20403743|G/-|frameshift_variant;TEP1|p.V1856Lfs*45|3|0.41|ENSG00000129566|chr14:20378179-20378179|C/-|frameshift_variant	48.601550744091256	0.44024757269956427	4				NaN	NaN	0	NaN	7827	3243	11070
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11073	29.8	NaN	2202.8	30	0	1118.4	0.106	+			17181	HTQVLFIAK	9	50	528.813638568839	1055.612724204478	2	528.8133544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HTQVLFIAK_	ENSG00000105388|ENST00000221992|CEACAM5;nc|ENSG00000105388|P06731-2|CEACAM5	67.49366992349736	0.1516260258713357	4				NaN	NaN	0	NaN	7828	3243	11070
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11074	29.802	NaN	1988.2	30	0	555.48	0.106	+			8185	EAATIVAVTG	10	54	466.25816963205443	930.5017863309089	2	467.2610168457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EAATIVAVTG_	ENSG00000132003|ENST00000590508|ZSWIM4;nc|ENSG00000132003|Q9H7M6|ZSWIM4	39.252832667884924	0.5560298534376815	4				NaN	NaN	0	NaN	7829	3243	11070
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11075	29.803	NaN	883.25	30	0	81.103	0.106	+			21900	KRRRLMES	8	41	538.3107753279063	1074.6069977226125	2	538.311279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KRRRLMES_	ENSG00000176903|ENST00000316836|PNMA1	24.20275056022122	0.7724576178584145	4				NaN	NaN	0	NaN	7830	3243	11070
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11076	29.805	NaN	1183.7	30	0	104	0.036			+	-1	ALREMPAGGGM	11	47	553.2588712771403	1104.5031896210805	2	553.25830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_ALREMPAGGGM(Oxidation (M))_	REV__ENSG00000086696|ENST00000199936|HSD17B2	36.446750945000026	0.6065623449959539	4				NaN	NaN	0	NaN	7831	3243	11070
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11077	29.806	NaN	733.28	30	0	54.706	0.14	+			46144	VDQPDLDP	8	43	449.71110281526154	NaN	0	449.7110900878906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VDQPDLDP_	CDHR2|p.G788Vfs*4|1|0.31|ENSG00000074276|chr5:176584639-176584639|G/-|frameshift_variant;CDHR2|p.R383Afs*51|1|0.42|ENSG00000074276|chr5:176576133-176576133|C/-|frameshift_variant;ENSG00000074276|ENST00000261944|CDHR2	25.57405402267927	1.7418937515398478	4				NaN	NaN	0	NaN	7832	3243	11070
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11095	29.845	NaN	8578.3	30	0	1535.1	0.214				-1	 	0	75	580.7822855733431	1159.550018213486	2	580.7830200195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7847	3246	11094
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11096	29.849	NaN	6839.9	30	0	1966.6	0.106	+			1921	AISAGLIAK	9	53	422.2684242377654	842.5222955423308	2	422.2684326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AISAGLIAK_	ENSG00000204219|ENST00000450454|TCEA3	84.9155231211612	0.07920012719736333	4				NaN	NaN	0	NaN	7848	3246	11094
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11097	29.851	NaN	2611.3	30	0	701.09	0.106	+			40669	SVASISLTK	9	49	453.2685181851913	904.5224834371826	2	453.2683410644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVASISLTK_	ENST00000298289.6_1_14:50085755-50087389:-|nuORF	54.722347961057174	0.257609425301511	4				NaN	NaN	0	NaN	7849	3246	11094
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11098	29.852	NaN	4369	30	0	942.81	0.106				-1	DALLAQKVC	9	61	509.27265479137833	1016.5307566495567	2	509.2734680175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_DALLAQKVC(Carbamidomethyl (C))_	PRAMEF12|p.R94C|1|0.19|ENSG00000116726|chr1:12775147-12775147|C/T|missense_variant	38.80614096846853	0.43426287593479557	4				NaN	NaN	0	NaN	7850	3246	11094
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11099	29.854	NaN	2013.1	30	0	126.99	0.106			+	47929	VSLYIFTV	8	59	471.2685910892881	NaN	0	471.2685241699219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSLYIFTV_	REV__ENST00000592811.5_1_19:45973189-45973720:+|nuORF	65.80317337860623	1.7418937515398478	4				NaN	NaN	0	NaN	7851	3246	11094
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11100	29.856	NaN	2434.7	30	0	1228.2	0.106			+	6949	CPITDQDPI	9	55	501.23385046824836	1000.4531480032967	2	501.23382568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_CPITDQDPI_	REV__ENSG00000185737|ENST00000372141|NRG3;REV__ENST00000555784.5_1_10:84711227-84745358:+|nuORF;REV__nc|ENSG00000185737|P56975-2|NRG3;REV__nc|ENSG00000185737|P56975-3|NRG3;REV__nc|ENSG00000185737|P56975|NRG3;REV__NRG3|p.L694Pfs*18|1|0.26|ENSG00000185737|chr10:82985517-82985518|-/C|frameshift_variant	35.61828744233558	0.47037581924408073	4				NaN	NaN	0	NaN	7852	3246	11094
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11101	29.858	NaN	3168.8	30	0	525.77	0.036	+			51194	YPLEGSRSY	9	58	536.2585656402633	1070.5025783473266	2	536.2586669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YPLEGSRSY_	ENSG00000170677|ENST00000397942|SOCS6	47.657333605630114	0.33044192980041115	4				NaN	NaN	0	NaN	7853	3246	11094
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11119	29.894	NaN	9910.2	30	0	1628.5	0.214	+			17718	IENGKVVSI	9	65	479.7818524681781	957.5491520031562	2	479.7817077636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IENGKVVSI_	ENSG00000176658|ENST00000318217|MYO1D	128.60217544463768	0.015992218256422188	4				NaN	NaN	0	NaN	7868	3249	11118
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11120	29.898	NaN	3714	30	0	710.7	0.106			+	24477	LGGKTILPQ	9	64	463.78687801707423	925.5592031009485	2	463.786865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LGGKTILPQ_	REV__sp|P16848|UL31_HCMVAProteinUL31OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL31PE=1SV=2;REV__sp|Q6SWA0|UL31_HCMVMProteinUL31OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL31PE=3SV=1	44.377184641726394	0.36891676396732553	4				NaN	NaN	0	NaN	7869	3249	11118
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11121	29.9	NaN	1752.5	30	0	162	0.106				-1	GNGTWCTDL	9	60	533.2200887429744	1064.4256245527488	2	533.2212524414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))GNGTWC(Carbamidomethyl (C))TDL_	ENST00000483495.5_1_20:34219680-34219898:-|nuORF	34.172542307311794	0.4838870758800184	4				NaN	NaN	0	NaN	7870	3249	11118
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11122	29.902	NaN	3100.1	30	0	1795.3	0.106	+			49126	VVLRLASLL	9	32	328.5585105716273	NaN	0	328.5585021972656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVLRLASLL_	ENSG00000179455|ENST00000314520|MKRN3	29.14955571784316	0.3303970763161698	4				NaN	NaN	0	NaN	7871	3249	11118
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11123	29.903	NaN	1586.2	30	0	196.2	0.106			+	50328	WTPVAEGPQ	9	59	492.74279853879085	983.4710441443817	2	492.7426452636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_WTPVAEGPQ_	REV__ENST00000264956.10_2_4:5813382-5814396:+|nuORF	44.116797842482775	0.37197099687881774	4				NaN	NaN	0	NaN	7872	3249	11118
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11124	29.905	NaN	851.99	30	0	94.205	0.036			+	-1	KAHDLCIAR	9	49	542.2885477528893	NaN	0	542.2875366210938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_KAHDLC(Carbamidomethyl (C))IAR_	REV__ENSG00000124486|ENST00000378308|USP9X;REV__nc|ENSG00000124486|Q93008-3|USP9X;REV__USP9X|p.K1773Nfs*9|1|0.28|ENSG00000124486|chrX:41214693-41214693|A/-|frameshift_variant;REV__USP9X|p.K2377*|1|0.88|ENSG00000124486|chrX:41229318-41229319|-/T|frameshift_variant;REV__USP9X|p.Y1953Mfs*7|1|0.72|ENSG00000124486|chrX:41216419-41216419|T/-|frameshift_variant	27.882242232435846	0.3367954786602879	4				NaN	NaN	0	NaN	7873	3249	11118
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11142	29.943	NaN	11352	30	0	1361.1	0.214	+			50409	YAAQASQAL	9	55	461.73496046022524	921.4553679872505	2	461.7346496582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YAAQASQAL_	ENSG00000118705|ENST00000237530|RPN2;ENST00000462163.1_1_20:35807747-35832332:+|nuORF;RPN2|p.G196Afs*41|1|0.12|ENSG00000118705|chr20:37204794-37204794|G/-|frameshift_variant	143.8867514904718	0.008656634767784652	4				NaN	NaN	0	NaN	7888	3252	11141
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11143	29.946	NaN	8009	30	0	959.1	0.106			+	43095	TEPELELEI	9	75	536.7745495960262	1071.5345462588523	2	536.7747192382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEPELELEI_	REV__ENSG00000101842|ENST00000217957|VSIG1;REV__nc|ENSG00000101842|Q86XK7-2|VSIG1	53.351449002276354	0.2690372970092375	4				NaN	NaN	0	NaN	7889	3252	11141
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11144	29.948	NaN	1383.5	30	0	279.69	0.106			+	8713	EEDTSVAIQ	9	53	496.231167108765	NaN	0	496.2307434082031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EEDTSVAIQ_	REV__tr|U7SPC3|U7SPC3_FUSNUAminotransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01811PE=3SV=1	35.61828744233558	0.29773779453147337	4				NaN	NaN	0	NaN	7890	3252	11141
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11145	29.95	NaN	1625.3	30	0	158.2	0.106			+	29931	PLVPSAQPG	9	49	433.24254200642486	864.4705310796497	2	433.2424621582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PLVPSAQPG_	REV__ENSG00000181291|ENST00000631683|TMEM132E	47.657333605630114	0.33044192980041115	4				NaN	NaN	0	NaN	7891	3252	11141
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11146	29.952	NaN	3088.7	30	0	494.34	0.106	+			28266	NDTFVHVT	8	61	466.72688435994144	931.4392157866829	2	466.726806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NDTFVHVT_	ENSG00000164587|ENST00000407193|RPS14;ENST00000519690.1_1_5:149827146-149827347:-|nuORF	116.90359126533652	0.23898233959989007	4				NaN	NaN	0	NaN	7892	3252	11141
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11147	29.954	NaN	1093.6	30	0	437.9	0.106	+			14184	GSRLLQPQPT	10	35	366.209228515625	NaN	0	366.209228515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GSRLLQPQPT_	ENST00000219476.7_1_16:2138283-2138505:+|nuORF	18.262085536374414	0.4201028297492154	4				NaN	NaN	0	NaN	7893	3252	11141
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11148	29.955	NaN	3199.8	30	0	227	0.038	+			34784	RYLDKTEQW	9	76	619.8106489118971	1237.6067448905942	2	619.8126220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RYLDKTEQW_	CON__P01030;ENSG00000224389|ENST00000435363|C4B;ENSG00000244731|ENST00000428956|C4A;nc|ENSG00000244731|P0C0L4-2|C4A	74.1650062923329	0.12277912660386392	4				NaN	NaN	0	NaN	7894	3252	11141
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11164	29.989	NaN	139650	30	0	54757	0.215	+			46846	VIFTGGVGK	9	70	439.26056971666594	876.5065865001319	2	439.2607116699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VIFTGGVGK_	ENSG00000134255|ENST00000357172|CEPT1;ENST00000473474.5_1_1:111715860-111726929:+|nuORF	153.03582135801034	0.006161527642367307	4				NaN	NaN	0	NaN	7907	3255	11163
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11165	29.992	NaN	9725	30	0	3008.1	0.106			+	-1	ASAGLQVYCH	10	50	369.1744607205629	1104.5015527618887	3	369.50921630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_ASAGLQVYC(Carbamidomethyl (C))H_	REV__ENSG00000169994|ENST00000409816|MYO7B;REV__ENST00000496841.5_1_2:128377972-128392002:+|nuORF;REV__nc|ENSG00000169994|Q6PIF6-2|MYO7B;REV__nc|ENSG00000169994|Q6PIF6|MYO7B	28.081489160057373	0.6505064946289502	4				NaN	NaN	0	NaN	7908	3255	11163
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11166	29.994	NaN	3563.2	30	0	611.85	0.106			+	46244	VEEKGVAQ	8	56	430.2296454349003	858.4447379366006	2	430.22955322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VEEKGVAQ_	REV__ENST00000524662.1_1_11:67176460-67177396:+|nuORF	79.45101966838831	0.3281480470254892	4				NaN	NaN	0	NaN	7909	3255	11163
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11167	29.996	NaN	1594	30	0	307.96	0.106	+			7552	DHMASSRNN	9	62	516.2190623864707	1030.4235718397413	2	516.219482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DHMASSRNN_	ENSG00000064703|ENST00000369702|DDX20	40.77816245573522	0.41113185337114944	4				NaN	NaN	0	NaN	7910	3255	11163
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11168	29.998	NaN	1697.6	30	0	149.9	0.037	+			34621	RVQDIFTAGK	10	62	567.8168923951627	1133.6192318571252	2	567.8177490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RVQDIFTAGK_	ENSG00000092068|ENST00000316902|SLC7A8;nc|ENSG00000092068|Q9UHI5-4|SLC7A8	56.632244143249146	0.3964695498866976	4				NaN	NaN	0	NaN	7911	3255	11163
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11186	30.035	NaN	3069.9	30	0	1033.9	0.214	+			39132	SSVFLAIKK	9	37	331.5425907703934	991.6059429113802	3	331.5426940917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSVFLAIKK_	ENST00000274030.10_1_4:120160492-120160642:+|nuORF	20.94693142431847	0.6074874384046576	4				NaN	NaN	0	NaN	7926	3258	11185
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11187	30.039	NaN	2673	30	0	347.28	0.106	+			14672	GTIEVSVVK	9	54	466.2763702453663	930.5381875575326	2	466.2763366699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTIEVSVVK_	ENSG00000109452|ENST00000262992|INPP4B;ENST00000512630.5_1_4:143191861-143226631:-|nuORF;INPP4B|p.K530Efs*15|1|0.23|ENSG00000109452|chr4:142145972-142145973|-/C|frameshift_variant	72.87924865735499	0.12833875048249987	4				NaN	NaN	0	NaN	7927	3258	11185
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11188	30.041	NaN	7900.1	30	0	868.88	0.106	+			11131	FGADARAL	8	60	410.7190835992569	819.4236142653139	2	410.7190246582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FGADARAL_	ENSG00000144381|ENST00000388968|HSPD1;ENST00000461097.1_1_2:198361816-198363572:-|nuORF;ENST00000476746.5_1_2:198360008-198364584:-|nuORF;HSPD1|p.G441Vfs*14|1|0.04|ENSG00000144381|chr2:197488385-197488385|C/-|frameshift_variant;nc|ENSG00000144381|P10809-2|HSPD1	82.24051045832904	0.30490469762271794	4				NaN	NaN	0	NaN	7928	3258	11185
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11189	30.043	NaN	2289.4	30	0	472.2	0.106			+	47142	VLQMIGKA	8	57	430.2552774853395	858.496002037479	2	430.2552795410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VLQMIGKA_	REV__ENSG00000127054|ENST00000435064|INTS11;REV__ENST00000461514.6_1_1:1248044-1249114:-|nuORF;REV__ENST00000470030.6_1_1:1247241-1248711:-|nuORF;REV__ENST00000478641.5_1_1:1248044-1248711:-|nuORF;REV__ENST00000485710.5_1_1:1247522-1249186:-|nuORF;REV__nc|ENSG00000127054|Q5TA45-2|INTS11;REV__nc|ENSG00000127054|Q5TA45-3|INTS11;REV__nc|ENSG00000127054|Q5TA45-4|INTS11;REV__nc|ENSG00000127054|Q5TA45-5|INTS11	35.200714571348534	0.6875396545722289	4				NaN	NaN	0	NaN	7929	3258	11185
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11190	30.045	NaN	1605.9	30	0	577.8	0.106	+			17195	HTVDFTFNK	9	58	554.774253309815	1107.5339536864299	2	555.2755737304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HTVDFTFNK_	ENSG00000082781|ENST00000296181|ITGB5	36.446750945000026	0.4619375763483977	4				NaN	NaN	0	NaN	7930	3258	11185
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11191	30.046	NaN	877.51	30	0	99.677	0.106			+	31719	QNVLSIIQ	8	44	457.7692565917969	NaN	0	457.7692565917969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QNVLSIIQ_	REV__ENSG00000008083|ENST00000341776|JARID2;REV__nc|ENSG00000008083|Q92833-3|JARID2	38.80614096846853	1.7418937515398478	4				NaN	NaN	0	NaN	7931	3258	11185
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11192	30.048	NaN	1425.5	30	0	149.97	0.038	+			33551	RLFEGIIKGK	10	47	387.5761143922314	NaN	0	387.5759582519531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RLFEGIIKGK_	CASK|p.N757Tfs*40|1|0.18|ENSG00000147044|chrX:41534753-41534753|T/-|frameshift_variant;ENSG00000147044|ENST00000378163|CASK;ENST00000486402.1_1_X:41519640-41524682:-|nuORF;nc|ENSG00000147044|O14936-2|CASK;nc|ENSG00000147044|O14936-3|CASK;nc|ENSG00000147044|O14936-4|CASK;nc|ENSG00000147044|O14936-6|CASK	28.5767321226876	0.40634399112407993	4				NaN	NaN	0	NaN	7932	3258	11185
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11210	30.086	NaN	5408	30	0	661.82	0.214	+			24265	LEVKGTQL	8	57	444.26337775760226	886.5122025820045	2	444.2634582519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LEVKGTQL_	ENSG00000143036|ENST00000271227|SLC44A3;nc|ENSG00000143036|Q8N4M1-2|SLC44A3;nc|ENSG00000143036|Q8N4M1-3|SLC44A3;SLC44A3|p.V304Cfs*11|1|0.06|ENSG00000143036|chr1:94845296-94845297|-/T|frameshift_variant	79.71258880314673	0.32596852995588826	4				NaN	NaN	0	NaN	7947	3261	11209
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11211	30.089	NaN	5189.4	30	0	1379.8	0.106	+			45345	TVSPFAVQK	9	59	488.77661103897117	NaN	0	488.7766418457031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVSPFAVQK_	DHX57|p.L732Wfs*7|2|0.33|ENSG00000163214|chr2:38847043-38847043|A/-|frameshift_variant;DHX57|p.N296Mfs*39|1|0.37|ENSG00000163214|chr2:38861523-38861523|T/-|frameshift_variant;ENSG00000163214|ENST00000457308|DHX57;ENST00000479345.2_1_2:39084268-39090579:-|nuORF;nc|ENSG00000163214|Q6P158-2|DHX57;nc|ENSG00000163214|Q6P158-3|DHX57	39.252832667884924	0.27938773122138094	4				NaN	NaN	0	NaN	7948	3261	11209
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11212	30.091	NaN	14813	30	0	2866.6	0.106	+			11792	FSPLPFVAL	9	71	495.7860861278834	989.5576193225668	2	495.7862548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FSPLPFVAL_	ENST00000572148.1_1_17:4863453-4863890:-|nuORF	45.9519527083369	0.35044536499095585	4				NaN	NaN	0	NaN	7949	3261	11209
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11213	30.093	NaN	18370	30	0	3939.3	0.106	+			17218	HVIETLIGK	9	83	505.305524798588	1008.596496663976	2	505.305419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HVIETLIGK_	ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5	90.60085204095205	0.06317133949006545	4				NaN	NaN	0	NaN	7950	3261	11209
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11214	30.095	NaN	3213.7	30	0	573.92	0.106	+			37153	SIVELVCK	8	62	474.2648879173938	946.5152229015877	2	474.265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_SIVELVC(Carbamidomethyl (C))K_	ENSG00000135108|ENST00000622495|FBXO21;ENST00000549689.5_1_12:117612134-117624310:-|nuORF;nc|ENSG00000135108|O94952|FBXO21	63.30626980617807	0.4690498839812213	4				NaN	NaN	0	NaN	7951	3261	11209
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11215	30.097	NaN	2173.9	30	0	491.42	0.034				-1	MIGMSTKL	8	63	456.72845450346534	NaN	0	456.7279968261719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Oxidation (M)	_M(Oxidation (M))IGM(Oxidation (M))STKL_	nc|ENSG00000049656|Q96KA5-2|CLPTM1L	58.78195531508484	1.7418937515398478	4				NaN	NaN	0	NaN	7952	3261	11209
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11216	30.097	NaN	749.9	30	0	128.59	0.141	+			44012	TPIYEGRTY	9	37	550.2757568359375	NaN	0	550.2757568359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TPIYEGRTY_	ENSG00000144283|ENST00000389759|PKP4;nc|ENSG00000144283|Q99569-2|PKP4	22.579656572578934	0.3605601358598771	4				NaN	NaN	0	NaN	7953	3261	11209
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11232	30.132	NaN	24743	30	0	5983.8	0.214	+			16223	HEDLGHVAL	9	76	495.7537703359663	989.4929877387326	2	495.7537536621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HEDLGHVAL_	ENSG00000128731|ENST00000261609|HERC2;ENST00000428453.5_1_15:20588586-20667676:-|nuORF;ENST00000430598.5_1_15:20613931-20667676:-|nuORF;ENST00000524476.5_1_15:28882105-28886289:+|nuORF;ENST00000529353.1_1_15:28878360-28886587:+|nuORF;ENST00000529624.5_3_15:28877823-28916776:+|nuORF;ENST00000562687.6_3_16:32769598-32772029:+|nuORF;HERC2|p.G2202Afs*8|1|0.2|ENSG00000128731|chr15:28213923-28213923|C/-|frameshift_variant;HERC2|p.K1446R|1|0.36|ENSG00000128731|chr15:28233678-28233678|T/C|missense_variant;nc|ENSG00000290376|Q9BVR0|HERC2P3	119.55681237560556	0.021468056596162587	4				NaN	NaN	0	NaN	7966	3264	11231
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11233	30.136	NaN	1807.1	30	0	165.7	0.106			+	13794	GQITGNLLI	9	58	464.7771035664756	927.5396541997512	2	464.7767028808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GQITGNLLI_	REV__ENSG00000187527|ENST00000342358|ATP13A5	51.19269402634007	0.2889735674168909	4				NaN	NaN	0	NaN	7967	3264	11231
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11234	30.138	NaN	2401.9	30	0	455.57	0.106			+	-1	AEVCMQLI	8	60	482.2341995394625	962.453846145725	2	482.23553466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_AEVC(Carbamidomethyl (C))MQLI_	REV__ENSG00000159921|ENST00000642385|GNE;REV__nc|ENSG00000159921|Q9Y223-2|GNE;REV__nc|ENSG00000159921|Q9Y223-3|GNE;REV__nc|ENSG00000159921|Q9Y223-4|GNE;REV__nc|ENSG00000159921|Q9Y223-5|GNE	53.351449002276354	0.5676011784961348	4				NaN	NaN	0	NaN	7968	3264	11231
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11235	30.14	NaN	794.05	30	0	103	0.033	+			11875	FTGSSKIL	8	35	426.7449035644531	NaN	0	426.7449035644531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FTGSSKIL_	CDH17|p.S645Lfs*3|1|0.55|ENSG00000079112|chr8:94146163-94146163|C/-|frameshift_variant;ENSG00000079112|ENST00000027335|CDH17	32.81241826257853	1.7418937515398478	4				NaN	NaN	0	NaN	7969	3264	11231
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11251	30.173	NaN	13349	30	0	4955.8	0.214	+			4912	ATQKVNLNQIP	11	51	409.2346887945297	1224.6822369837892	3	409.2348327636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATQKVNLNQIP_	ENSG00000123178|ENST00000361840|SPRYD7;nc|ENSG00000123178|Q5W111-2|SPRYD7	42.33807565288922	0.5259510355945483	4				NaN	NaN	0	NaN	7982	3267	11250
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11252	30.176	NaN	6971	30	0	1741.8	0.106	+			1933	AISEYIATK	9	68	498.27400394549585	994.5334549577917	2	498.2742004394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AISEYIATK_	ENSG00000095002|ENST00000233146|MSH2;MSH2|p.M813Nfs*11|1|0.17|ENSG00000095002|chr2:47478497-47478498|-/A|frameshift_variant;MSH2|p.T806Kfs*4|1|0.2|ENSG00000095002|chr2:47478472-47478478|CACTCAC/-|frameshift_variant;nc|ENSG00000095002|P43246-2|MSH2	104.01359247289065	0.03510646158778409	4				NaN	NaN	0	NaN	7983	3267	11250
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11253	30.178	NaN	1283.7	30	0	230.04	0.106	+			35090	SAFSVAVTK	9	44	455.2553654535547	908.4961779739094	2	455.2552795410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAFSVAVTK_	ENSG00000145861|ENST00000652664|C1QTNF2	72.87924865735499	0.12833875048249987	4				NaN	NaN	0	NaN	7984	3267	11250
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11254	30.18	NaN	2498	30	0	285.96	0.106	+			22015	KSGPFGKK	8	56	424.75299846233975	847.4914439914795	2	424.7530212402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KSGPFGKK_	ENSG00000112984|ENST00000394894|KIF20A;nc|ENSG00000112984|O95235-2|KIF20A	65.80317337860623	0.44433089765398776	4				NaN	NaN	0	NaN	7985	3267	11250
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11255	30.182	NaN	1154.3	30	0	238.07	0.106			+	15836	GWGLSYDSV	9	48	492.22927165167755	982.4439903701551	2	492.2293701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GWGLSYDSV_	REV__ENST00000453604.6_1_19:11513241-11517469:-|nuORF	33.51558372728122	0.4900267029546261	4				NaN	NaN	0	NaN	7986	3267	11250
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11256	30.183	NaN	5014.2	30	0	3101.2	0.106	+			26189	LSRSLGAVVF	10	35	350.2096258513925	1047.6070481543775	3	350.2097473144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSRSLGAVVF_	ENSG00000104147|ENST00000220514|OIP5	30.503639358989545	0.6307262373768582	4				NaN	NaN	0	NaN	7987	3267	11250
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11257	30.185	NaN	875.83	30	0	466.5	0.031			+	25	AAAGVAAR	8	19	343.7005664326902	NaN	0	343.7005310058594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AAAGVAAR_	REV__ENST00000403734.2_1_11:62494359-62494803:-|nuORF	23.036711822280957	1.7418937515398478	4				NaN	NaN	0	NaN	7988	3267	11250
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11271	30.215	NaN	20124	30	0	6354.3	0.214	+			32210	QTAGNVFLK	9	83	489.27482129555256	976.5350896579051	2	489.2744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QTAGNVFLK_	ENSG00000120686|ENST00000239878|UFM1;nc|ENSG00000120686|P61960-2|UFM1	95.81516180277367	0.04847050768394289	4				NaN	NaN	0	NaN	7999	3270	11270
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11272	30.218	NaN	42436	30	0	7107.5	0.106	+			8190	EAAVAIKAM	9	74	452.251759293691	902.488965654182	2	452.2518615722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EAAVAIKAM_	ENSG00000132507|ENST00000336458|EIF5A;ENSG00000253626|ENST00000520547|EIF5AL1;nc|ENSG00000132507|P63241-2|EIF5A	191.6257511998002	0.00012895968667509943	4				NaN	NaN	0	NaN	8000	3270	11270
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11273	30.22	NaN	6807.5	30	0	3859.2	0.106				-1	SSYAITISC	9	64	501.23385046824836	1000.4531480032967	2	501.2340087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SSYAITISC(Carbamidomethyl (C))_	ENST00000496279.5_1_7:90338695-90338818:+|nuORF	45.9519527083369	0.35044536499095585	4				NaN	NaN	0	NaN	8001	3270	11270
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11274	30.222	NaN	25919	30	0	4491.8	0.106	+			25753	LSADPVMAK	9	77	466.24906327785675	930.4835736225135	2	466.2491760253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSADPVMAK_	ENST00000441188.2_1_X:92477682-92478501:-|nuORF	79.71258880314673	0.09879134589249085	4				NaN	NaN	0	NaN	8002	3270	11270
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11275	30.224	NaN	8908.8	30	0	2980.2	0.106	+			30958	QENSRVIVM	9	64	538.2813776028597	1074.5482022725193	2	538.2821044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QENSRVIVM_	ENSG00000111679|ENST00000318974|PTPN6;ENSG00000179295|ENST00000351677|PTPN11;ENST00000416215.6_1_12:7061038-7070080:+|nuORF;ENST00000511359.1_1_5:23303923-23304922:-|nuORF;nc|ENSG00000111679|P29350-2|PTPN6;nc|ENSG00000111679|P29350-3|PTPN6;nc|ENSG00000111679|P29350-4|PTPN6;nc|ENSG00000179295|Q06124-1|PTPN11;nc|ENSG00000179295|Q06124-3|PTPN11	68.78682469695295	0.14603441672067394	4				NaN	NaN	0	NaN	8003	3270	11270
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11276	30.226	NaN	2453.3	30	0	608.73	0.106			+	-1	GSLDNLRMF	9	38	356.8427669877532	1067.5064715634596	3	356.843017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_GSLDNLRM(Oxidation (M))F_	REV__CACNA1G|p.E1556Rfs*15|1|0.23|ENSG00000006283|chr17:50607978-50607978|G/-|frameshift_variant;REV__CACNA1G|p.E2317Rfs*47|1|0.22|ENSG00000006283|chr17:50626559-50626559|C/-|frameshift_variant;REV__CACNA1G|p.G548Wfs*31|1|0.08|ENSG00000006283|chr17:50576035-50576036|-/C|frameshift_variant;REV__CACNA1G|p.P2298Afs*13|1|0.4|ENSG00000006283|chr17:50626502-50626503|-/G|frameshift_variant;REV__CACNA1G|p.R516Gfs*48|1|0.26|ENSG00000006283|chr17:50575943-50575943|C/-|frameshift_variant;REV__ENSG00000006283|ENST00000359106|CACNA1G;REV__nc|ENSG00000006283|O43497-10|CACNA1G;REV__nc|ENSG00000006283|O43497-11|CACNA1G;REV__nc|ENSG00000006283|O43497-12|CACNA1G;REV__nc|ENSG00000006283|O43497-13|CACNA1G;REV__nc|ENSG00000006283|O43497-15|CACNA1G;REV__nc|ENSG00000006283|O43497-16|CACNA1G;REV__nc|ENSG00000006283|O43497-17|CACNA1G;REV__nc|ENSG00000006283|O43497-18|CACNA1G;REV__nc|ENSG00000006283|O43497-19|CACNA1G;REV__nc|ENSG00000006283|O43497-2|CACNA1G;REV__nc|ENSG00000006283|O43497-20|CACNA1G;REV__nc|ENSG00000006283|O43497-21|CACNA1G;REV__nc|ENSG00000006283|O43497-22|CACNA1G;REV__nc|ENSG00000006283|O43497-23|CACNA1G;REV__nc|ENSG00000006283|O43497-24|CACNA1G;REV__nc|ENSG00000006283|O43497-25|CACNA1G;REV__nc|ENSG00000006283|O43497-26|CACNA1G;REV__nc|ENSG00000006283|O43497-27|CACNA1G;REV__nc|ENSG00000006283|O43497-28|CACNA1G;REV__nc|ENSG00000006283|O43497-29|CACNA1G;REV__nc|ENSG00000006283|O43497-3|CACNA1G;REV__nc|ENSG00000006283|O43497-30|CACNA1G;REV__nc|ENSG00000006283|O43497-31|CACNA1G;REV__nc|ENSG00000006283|O43497-32|CACNA1G;REV__nc|ENSG00000006283|O43497-33|CACNA1G;REV__nc|ENSG00000006283|O43497-34|CACNA1G;REV__nc|ENSG00000006283|O43497-35|CACNA1G;REV__nc|ENSG00000006283|O43497-36|CACNA1G;REV__nc|ENSG00000006283|O43497-4|CACNA1G;REV__nc|ENSG00000006283|O43497-5|CACNA1G;REV__nc|ENSG00000006283|O43497-6|CACNA1G;REV__nc|ENSG00000006283|O43497-7|CACNA1G;REV__nc|ENSG00000006283|O43497-8|CACNA1G;REV__nc|ENSG00000006283|O43497-9|CACNA1G	19.996771675451527	0.6112419832031292	4				NaN	NaN	0	NaN	8004	3270	11270
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11277	30.227	NaN	833.52	30	0	206.06	0.035	+			14974	GTMTGMLYK	9	53	509.2411792673649	NaN	0	509.2415466308594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_GTM(Oxidation (M))TGMLYK_	ENSG00000178440|ENST00000651763|TIMM23B-AGAP6;ENSG00000204152|ENST00000651259|TIMM23B;ENSG00000265354|ENST00000580018|TIMM23;nc|ENSG00000204152|Q5SRD1-2|TIMM23B	47.657333605630114	0.2228375344433429	4				NaN	NaN	0	NaN	8005	3270	11270
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11292	30.259	NaN	12103	30	0	5061.2	0.214			+	-1	NICYINAAQ	9	70	533.7526916121051	1065.49083029101	2	533.7536010742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_NIC(Carbamidomethyl (C))YINAAQ_	REV__ENSG00000141580|ENST00000392325|WDR45B	37.15910966729921	0.4535818937225704	4				NaN	NaN	0	NaN	8017	3273	11291
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11293	30.263	NaN	5716.4	30	0	3248.9	0.106				-1	 	0	44	336.2273415448928	670.4401301565856	2	336.2273254394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8018	3273	11291
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11294	30.265	NaN	16483	30	0	9881.9	0.106	+			40738	SVCVLDLRK	9	57	363.87411403108183	1088.6005126934456	3	363.8741760253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SVC(Carbamidomethyl (C))VLDLRK_	ENSG00000101849|ENST00000645353|TBL1X;ENSG00000177565|ENST00000457928|TBL1XR1;nc|ENSG00000101849|O60907-2|TBL1X;TBL1X|p.G568S|1|0.45|ENSG00000101849|chrX:9714998-9714998|G/A|missense_variant	59.93077597824379	0.21419174904018318	4				NaN	NaN	0	NaN	8019	3273	11291
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11295	30.266	NaN	1410.5	30	0	166.15	0.033	+			2195	ALPAAQFPA	9	45	443.2467382931413	884.4789236530826	2	443.24688720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ALPAAQFPA_	ENST00000527730.1_3_8:145743395-145745348:+|nuORF;ENST00000529022.5_1_8:145743395-145745348:+|nuORF;ENST00000531310.1_1_8:145744973-145745348:+|nuORF	33.51558372728122	0.4900267029546261	4				NaN	NaN	0	NaN	8020	3273	11291
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11313	30.304	NaN	1693.2	30	0	356.2	0.214	+			24857	LKEDILELI	9	56	543.3243736561976	1084.6341943791952	2	543.32568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LKEDILELI_	CUL5|p.F72L|1|0.09|ENSG00000166266|chr11:108046349-108046349|T/C|missense_variant	27.882242232435846	0.5426732730940306	4				NaN	NaN	0	NaN	8035	3276	11312
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11314	30.307	NaN	2234.9	30	0	276.81	0.034	+			6417	AVVQVALDK	9	54	471.78419702896497	NaN	0	471.7842102050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVVQVALDK_	ABCB1|p.N809Tfs*6|1|0.33|ENSG00000085563|chr7:87536513-87536513|T/-|frameshift_variant;ABCB1|p.P1016Lfs*2|1|0.23|ENSG00000085563|chr7:87516546-87516546|G/-|frameshift_variant;ENSG00000085563|ENST00000622132|ABCB1;nc|ENSG00000085563|P08183-2|ABCB1	53.08895987439943	0.18540527177656715	4				NaN	NaN	0	NaN	8036	3276	11312
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11332	30.344	NaN	6401	30	0	949.14	0.214	+			19979	KEHQQQQRQQQ	11	66	489.2477939134392	1464.7215523405175	3	489.2474060058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEHQQQQRQQQ_	ENSG00000204442|ENST00000375915|NALF1	20.31501182869353	0.7753667161465326	4				NaN	NaN	0	NaN	8051	3279	11331
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11333	30.347	NaN	16618	30	0	4879.8	0.106	+			43826	TLRTFSLVL	9	68	350.54958533126506	1048.6269265939952	3	350.549560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TLRTFSLVL_	DYNC2LI1|p.I230Yfs*38|1|0.29|ENSG00000138036|chr2:43800870-43800870|A/-|frameshift_variant;ENSG00000138036|ENST00000260605|DYNC2LI1;nc|ENSG00000138036|Q8TCX1-2|DYNC2LI1;nc|ENSG00000138036|Q8TCX1-3|DYNC2LI1;nc|ENSG00000138036|Q8TCX1-4|DYNC2LI1	25.450171626174864	0.5654022654467333	4				NaN	NaN	0	NaN	8052	3279	11331
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11334	30.349	NaN	4034.1	30	0	823.49	0.106			+	47050	VLFDKGAK	8	58	439.26056971666594	876.5065865001319	2	439.2606201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VLFDKGAK_	REV__ENSG00000106304|ENST00000682466|SPAM1;REV__nc|ENSG00000106304|P38567-2|SPAM1;REV__SPAM1|p.K450Rfs*3|1|0.35|ENSG00000106304|chr7:123959786-123959787|AA/-|frameshift_variant	49.44154591367651	0.597725784090933	4				NaN	NaN	0	NaN	8053	3279	11331
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11335	30.351	NaN	5669.1	30	0	912.1	0.106	+			805	AEFTPAVHA	9	57	471.7377690892279	941.4609852452559	2	471.7373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEFTPAVHA_	ENSG00000188536|ENST00000251595|HBA2;ENSG00000206172|ENST00000320868|HBA1	55.50420428727701	0.2510918378945873	4				NaN	NaN	0	NaN	8054	3279	11331
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11336	30.353	NaN	3568.8	30	0	675.05	0.106	+			42243	TAAPPAQPL	9	69	433.24254200642486	864.4705310796497	2	433.2425231933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TAAPPAQPL_	BRD2|p.G595Vfs*6|1|0.59|ENSG00000204256|chr6:32978327-32978327|G/-|frameshift_variant;ENSG00000204256|ENST00000374825|BRD2;nc|ENSG00000204256|P25440-2|BRD2;nc|ENSG00000204256|P25440-3|BRD2;nc|ENSG00000204256|P25440-4|BRD2	56.72105179125745	0.24094814563026265	4				NaN	NaN	0	NaN	8055	3279	11331
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11337	30.355	NaN	3244	30	0	908.54	0.106			+	25158	LLSVVISAN	9	56	458.27907607881025	914.5435992244205	2	458.2787780761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LLSVVISAN_	REV__tr|U7T4W4|U7T4W4_FUSNUProteintranslocasesubunitSecYOS=FusobacteriumnucleatumCTI-5OX=1316586GN=secYPE=3SV=1	45.97224482568171	0.3502073465782774	4				NaN	NaN	0	NaN	8056	3279	11331
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11338	30.356	NaN	1969.9	30	0	108.9	0.036	+			16181	HEAMKLVTM	9	64	530.2693122755876	1058.524071617975	2	530.2699584960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HEAMKLVTM_	ENSG00000177963|ENST00000526104|RIC8A;ENST00000526557.1_1_11:213233-214347:+|nuORF;ENST00000530149.1_1_11:213233-213428:+|nuORF;nc|ENSG00000177963|Q9NPQ8-2|RIC8A;nc|ENSG00000177963|Q9NPQ8-3|RIC8A;nc|ENSG00000177963|Q9NPQ8-4|RIC8A	59.93077597824379	0.21419174904018318	4				NaN	NaN	0	NaN	8057	3279	11331
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11356	30.394	NaN	7753.2	30	0	1965.7	0.214	+			37058	SISAVVMEK	9	63	482.2625990926204	962.5106452520408	2	482.2628173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SISAVVMEK_	ENSG00000138688|ENST00000679879|BLTP1;KIAA1109-FSIP2|1|fusion;nc|ENSG00000138688|Q2LD37-2|BLTP1;nc|ENSG00000138688|Q2LD37-4|BLTP1;nc|ENSG00000138688|Q2LD37-6|BLTP1;nc|ENSG00000138688|Q2LD37-7|BLTP1;nc|ENSG00000138688|Q2LD37|BLTP1	98.58198989935565	0.04066992115528678	4				NaN	NaN	0	NaN	8072	3282	11355
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11357	30.397	NaN	4524.1	30	0	1399.3	0.106	+			18863	IVFVTGNAK	9	58	474.77957194172313	947.5445909502463	2	474.7795104980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IVFVTGNAK_	ENSG00000125877|ENST00000380113|ITPA;ENST00000460550.5_1_20:3190197-3194650:+|nuORF;nc|ENSG00000125877|Q9BY32-3|ITPA	96.19043198914106	0.047412499214244314	4				NaN	NaN	0	NaN	8073	3282	11355
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11358	30.399	NaN	1260.3	30	0	309.81	0.106	+			27202	MEGDDIVN	8	44	446.6894645090217	891.3643760848435	2	446.6895446777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MEGDDIVN_	CLSTN2|p.G576V|1|0.29|ENSG00000158258|chr3:140556565-140556565|G/T|missense_variant	35.61828744233558	0.6843154725607303	4				NaN	NaN	0	NaN	8074	3282	11355
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11359	30.401	NaN	2369.2	30	0	579.64	0.106	+			45678	VAAAIPKVA	9	44	420.27118785090477	838.5278227686096	2	420.27105712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VAAAIPKVA_	ENSG00000005810|ENST00000544440|MYCBP2;MYCBP2|p.N3049*|1|0.11|ENSG00000005810|chr13:77097894-77097895|TT/-|frameshift_variant;MYCBP2|p.P4047Qfs*26|2|0.35|ENSG00000005810|chr13:77067782-77067782|G/-|frameshift_variant;MYCBP2|p.T4311Pfs*37|1|0.14|ENSG00000005810|chr13:77059619-77059619|G/-|frameshift_variant;MYCBP2|p.V3749*|1|0.12|ENSG00000005810|chr13:77081486-77081486|C/-|frameshift_variant;nc|ENSG00000005810|O75592-2|MYCBP2	33.51558372728122	0.4900267029546261	4				NaN	NaN	0	NaN	8075	3282	11355
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11360	30.403	NaN	2126.6	30	0	340.91	0.106	+			34145	RSVSQSRLG	9	52	495.276090904888	988.537628876576	2	495.27618408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RSVSQSRLG_	nc|ENSG00000289721|W6CW81|PYDC5	37.81151784470057	0.4459294069877048	4				NaN	NaN	0	NaN	8076	3282	11355
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11361	30.405	NaN	915.79	30	0	155.89	0.106			+	29853	PLDDPSPPVR	10	47	546.7885131835938	NaN	0	546.7885131835938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PLDDPSPPVR_	REV__ENSG00000142765|ENST00000616558|SYTL1;REV__nc|ENSG00000142765|Q8IYJ3-2|SYTL1	31.529811441608018	0.39664753963064203	4				NaN	NaN	0	NaN	8077	3282	11355
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11362	30.407	NaN	629.79	30	0	45.562	0.037			+	20193	KELDEFNKK	9	39	575.8092651367188	NaN	0	575.8092651367188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KELDEFNKK_	REV__ENSG00000162614|ENST00000334785|NEXN;REV__nc|ENSG00000162614|Q0ZGT2-2|NEXN;REV__nc|ENSG00000162614|Q0ZGT2-3|NEXN;REV__nc|ENSG00000162614|Q0ZGT2-4|NEXN;REV__NEXN|p.E240Nfs*8|1|0.31|ENSG00000162614|chr1:77926739-77926739|A/-|frameshift_variant;REV__NEXN|p.I467*|2|0.39|ENSG00000162614|chr1:77935964-77935964|A/-|frameshift_variant;REV__NEXN|p.N590Tfs*5|1|0.2|ENSG00000162614|chr1:77942566-77942566|A/-|frameshift_variant	27.64392233501311	0.33799870628145506	4				NaN	NaN	0	NaN	8078	3282	11355
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11379	30.442	NaN	4081.4	30	0	1448.7	0.214	+			18837	IVAGTIVVK	9	57	450.3000262471914	898.5854995611828	2	450.300048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IVAGTIVVK_	ENSG00000137414|ENST00000259963|FAM8A1	79.71258880314673	0.09879134589249085	4				NaN	NaN	0	NaN	8092	3285	11378
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11380	30.445	NaN	8781.8	30	0	3258.3	0.106	+			40540	SVAALPVCK	9	56	444.25430812078594	886.4940633083719	2	444.25469970703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVAALPVCK_	ENSG00000007255|ENST00000585934|TRAPPC6A;nc|ENSG00000007255|O75865-2|TRAPPC6A	58.78195531508484	0.22376836668196862	4				NaN	NaN	0	NaN	8093	3285	11378
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11381	30.447	NaN	3118.1	30	0	585.96	0.106	+			17219	HVIETLIGK	9	65	505.305524798588	1008.596496663976	2	505.3063049316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HVIETLIGK_	ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5	104.74654710444128	0.034358562718640136	4				NaN	NaN	0	NaN	8094	3285	11378
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11382	30.449	NaN	2646.7	30	0	769.45	0.106	+			39389	STDMPAAFK	9	56	484.23115260575673	966.4477522783135	2	484.2314758300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STDMPAAFK_	ENSG00000185946|ENST00000423855|RNPC3;ENST00000533834.1_1_1:104080032-104087738:+|nuORF;ENST00000605810.1_1_3:70174691-70175321:-|nuORF;nc|ENSG00000185946|Q96LT9-2|RNPC3	84.9155231211612	0.07920012719736333	4				NaN	NaN	0	NaN	8095	3285	11378
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11383	30.451	NaN	2010.5	30	0	371.11	0.106	+			19008	IVVPKAAIVAR	11	42	568.8791417263542	1135.7437305195083	2	568.8797607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IVVPKAAIVAR_	ENSG00000265972|ENST00000582401|TXNIP;ENST00000488537.1_1_1:145440216-145440639:+|nuORF;nc|ENSG00000265972|Q9H3M7-2|TXNIP	50.033510581677724	0.4206539900604183	4				NaN	NaN	0	NaN	8096	3285	11378
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11384	30.453	NaN	2162.5	30	0	437.03	0.106	+			13085	GFRLVSTR	8	49	468.2740780903086	934.5336032474172	2	468.273681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GFRLVSTR_	KCNRG|p.H224R|1|0.29|ENSG00000198553|chr13:50020306-50020306|A/G|missense_variant	34.172542307311794	0.6954784234644539	4				NaN	NaN	0	NaN	8097	3285	11378
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11385	30.455	NaN	1898.1	30	0	675.51	0.034				-1	VVVMGLVGN	9	52	452.251759293691	902.488965654182	2	453.7561340332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_VVVM(Oxidation (M))GLVGN_	PRLHR|p.V73M|1|0.12|ENSG00000119973|chr10:118595028-118595028|C/T|missense_variant	26.79610172149135	0.5528238334041078	4				NaN	NaN	0	NaN	8098	3285	11378
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11403	30.49	NaN	19647	30	0	8921.5	0.214	+			18935	IVNDFAYMKK	10	78	410.2178781251835	NaN	0	410.21783447265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IVNDFAYMKK_	ENSG00000170348|ENST00000303575|TMED10;ENST00000534816.1_1_8:146220430-146220868:+|nuORF;ENST00000555036.1_1_14:75602424-75614456:-|nuORF;ENST00000555873.1_1_14:75601590-75605782:-|nuORF;ENST00000556969.5_1_14:75601590-75614465:-|nuORF	88.1336951990783	0.06092585671649051	4				NaN	NaN	0	NaN	8113	3288	11402
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11404	30.493	NaN	8935.5	30	0	2469.4	0.106	+			23375	LAADCAHEL	9	69	471.72102824528656	941.4275035573731	2	471.7207946777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LAADCAHEL_	ENSG00000157379|ENST00000288111|DHRS1;ENST00000558340.1_1_14:24760067-24761569:-|nuORF;ENST00000561137.5_1_14:24760413-24761527:-|nuORF;ENST00000561273.5_1_14:24760714-24761569:-|nuORF	90.77665401227738	0.06267569666681755	4				NaN	NaN	0	NaN	8114	3288	11402
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11405	30.495	NaN	12888	30	0	5496.4	0.106	+			18832	IVAGSLITK	9	57	451.2892089307508	900.5638649283017	2	451.28924560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IVAGSLITK_	ENSG00000196504|ENST00000545856|PRPF40A;nc|ENSG00000196504|O75400-2|PRPF40A;nc|ENSG00000196504|O75400|PRPF40A;PRPF40A|p.K411Sfs*40|2|0.19|ENSG00000196504|chr2:152672597-152672597|T/-|frameshift_variant;PRPF40A|p.Q412Afs*4|1|0.16|ENSG00000196504|chr2:152672596-152672597|-/T|frameshift_variant	95.81516180277367	0.04847050768394289	4				NaN	NaN	0	NaN	8115	3288	11402
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11406	30.497	NaN	4306.4	30	0	560.49	0.106	+			27549	MPEASGPKF	9	63	482.2341995394625	962.453846145725	2	482.2338562011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MPEASGPKF_	ENSG00000197077|ENST00000358431|KIAA1671;KIAA1671|p.S1569Afs*58|1|0.46|ENSG00000197077|chr22:25174289-25174289|C/-|frameshift_variant;KIAA1671|p.T1322Rfs*192|1|0.18|ENSG00000197077|chr22:25041088-25041088|A/-|frameshift_variant	82.7504851949679	0.08565546331141553	4				NaN	NaN	0	NaN	8116	3288	11402
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11407	30.499	NaN	4521.9	30	0	1034	0.106	+			32917	RDVPVVRL	8	66	477.2972332767555	NaN	0	477.2972106933594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RDVPVVRL_	ENSG00000151348|ENST00000533608|EXT2;EXT2|p.D82Ifs*30|1|0.43|ENSG00000151348|chr11:44107951-44107951|G/-|frameshift_variant;EXT2|p.N517Tfs*3|1|0.49|ENSG00000151348|chr11:44206844-44206844|A/-|frameshift_variant;nc|ENSG00000151348|Q93063-2|EXT2;nc|ENSG00000151348|Q93063-3|EXT2	62.107414245175825	1.7418937515398478	4				NaN	NaN	0	NaN	8117	3288	11402
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11408	30.501	NaN	3081.4	30	0	372.23	0.035			+	21925	KRVHAMTY	8	67	503.2702867965975	1004.526020659995	2	503.7715148925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KRVHAMTY_	REV__ENSG00000114853|ENST00000232974|ZBTB47;REV__ENSG00000198740|ENST00000430262|ZNF652;REV__nc|ENSG00000114853|Q9UFB7-2|ZBTB47	42.396135135203025	0.6414440140393314	4				NaN	NaN	0	NaN	8118	3288	11402
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11409	30.501	NaN	171150	30	0	53434	0.145			+	5079	ATSLVDQQLRL	11	89	415.2379812396985	1242.6921143192956	3	415.57269287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATSLVDQQLRL_	REV__ENST00000368750.7_1_1:153066129-153066971:-|nuORF	39.873155843976775	0.5596786644756743	4				NaN	NaN	0	NaN	8119	3288	11402
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11427	30.54	NaN	51903	30	0	6943.2	0.214			+	19970	KEGVIELQR	9	94	536.3111177795591	1070.6076826259182	2	536.3116455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEGVIELQR_	REV__ENSG00000130714|ENST00000402686|POMT1;REV__nc|ENSG00000130714|Q9Y6A1-3|POMT1;REV__nc|ENSG00000130714|Q9Y6A1-4|POMT1;REV__nc|ENSG00000130714|Q9Y6A1|POMT1	129.42129120953632	0.01549634589885217	4				NaN	NaN	0	NaN	8134	3291	11426
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11428	30.543	NaN	20810	30	0	4435.7	0.106	+			29827	PKSLTTSLHNK	11	78	409.2345478891778	1224.6818142677334	3	409.2344970703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PKSLTTSLHNK_	ENSG00000137642|ENST00000260197|SORL1;SORL1|p.F2103Lfs*44|1|0.22|ENSG00000137642|chr11:121625218-121625218|T/-|frameshift_variant	52.167168403610894	0.39337392184041037	4				NaN	NaN	0	NaN	8135	3291	11426
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11429	30.545	NaN	4949.8	30	0	759.77	0.106	+			44743	TTMDLPVSK	9	63	496.2597589383137	990.5049649434275	2	496.2595520019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TTMDLPVSK_	RGS5|p.P30Ffs*54|1|0.05|ENSG00000143248|chr1:163168325-163168326|-/AA|frameshift_variant;RGS5|p.P30Lfs*54|1|0.05|ENSG00000143248|chr1:163168324-163168325|-/TA|frameshift_variant	82.7504851949679	0.08565546331141553	4				NaN	NaN	0	NaN	8136	3291	11426
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11430	30.547	NaN	15557	30	0	1779	0.106	+			42327	TAGDGLIELRK	11	84	586.8344400629686	1171.6543271927371	2	586.834716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TAGDGLIELRK_	ENSG00000167085|ENST00000300408|PHB1	133.7523857240709	0.0010046400317632145	4				NaN	NaN	0	NaN	8137	3291	11426
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11431	30.549	NaN	11243	30	0	1095.1	0.106	+			2511	APVEVTHNF	9	80	507.25595897293374	1012.4973650126675	2	507.2560729980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_APVEVTHNF_	ENSG00000005007|ENST00000262803|UPF1;nc|ENSG00000005007|Q92900|UPF1	98.58198989935565	0.04066992115528678	4				NaN	NaN	0	NaN	8138	3291	11426
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11432	30.551	NaN	5735.5	30	0	548.37	0.038	+			30739	QDLKTELLQR	10	69	622.3525473186747	1242.6905417041494	2	622.353759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QDLKTELLQR_	EEA1|p.K257Nfs*13|2|0.34|ENSG00000102189|chr12:92851138-92851138|T/-|frameshift_variant;EEA1|p.N1389Mfs*3|1|0.33|ENSG00000102189|chr12:92776081-92776081|T/-|frameshift_variant;ENSG00000102189|ENST00000322349|EEA1	90.14881205920913	0.1302219035121668	4				NaN	NaN	0	NaN	8139	3291	11426
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11433	30.551	NaN	2605.5	30	0	353.24	0.146	+			50761	YEKLADAVRF	10	50	404.5520785833403	1210.6344063502208	3	404.5520935058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YEKLADAVRF_	ENSG00000163625|ENST00000295888|WDFY3;ENST00000426414.6_1_4:85730999-85781744:-|nuORF;nc|ENSG00000163625|Q8IZQ1-2|WDFY3;WDFY3|p.L1060Cfs*41|1|0.4|ENSG00000163625|chr4:84794968-84794968|A/-|frameshift_variant;WDFY3|p.L1842Yfs*10|1|0.19|ENSG00000163625|chr4:84755300-84755300|A/-|frameshift_variant;WDFY3|p.N1207Tfs*16|1|0.37|ENSG00000163625|chr4:84789775-84789775|T/-|frameshift_variant	28.081489160057373	0.6505064946289502	4				NaN	NaN	0	NaN	8140	3291	11426
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11468	30.627	NaN	29566	30	0	12821	0.214			+	-1	RMLSLGMGR	9	64	539.7788869743857	1077.5432210155714	2	539.7796630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))RM(Oxidation (M))LSLGMGR_	REV__ENSG00000169710|ENST00000306749|FASN;REV__FASN|p.Q502H|1|0.72|ENSG00000169710|chr17:82091056-82091056|C/A|missense_variant	27.882242232435846	0.5426732730940306	4				NaN	NaN	0	NaN	8169	3297	11467
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11469	30.631	NaN	8971.3	30	0	6174.5	0.106				-1	SLMGCLLLLL	10	39	364.54480333247903	1090.6125805976371	3	364.5450134277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_SLM(Oxidation (M))GCLLLLL_	ENSG00000105983|ENST00000353442|LMBR1;ENST00000434503.5_1_7:156480878-156685794:-|nuORF;nc|ENSG00000105983|Q8WVP7-3|LMBR1	23.52269567125451	0.6877354443478558	4				NaN	NaN	0	NaN	8170	3297	11467
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11470	30.633	NaN	6466.8	30	0	1213.4	0.106			+	42331	TAGGSRQQPP	10	81	499.7527445508319	997.4909361684638	2	499.7523193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TAGGSRQQPP_	REV__ENST00000367108.7_1_1:206809048-206811012:+|nuORF	51.19269402634007	0.44601001148513897	4				NaN	NaN	0	NaN	8171	3297	11467
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11471	30.634	NaN	3854.3	30	0	1034	0.106			+	47099	VLLDSLSIN	9	67	487.2828499965197	972.5511470598394	2	487.2817077636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VLLDSLSIN_	REV__ENSG00000054277|ENST00000366554|OPN3;REV__nc|ENSG00000203668|Q9H1Y3-2|OPN3	45.97224482568171	0.3502073465782774	4				NaN	NaN	0	NaN	8172	3297	11467
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11472	30.636	NaN	17162	30	0	2528.1	0.106	+			32381	QVAPVANSY	9	79	474.74255020808124	947.4705474829625	2	474.7423095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QVAPVANSY_	ENSG00000157557|ENST00000360938|ETS2	98.62937762414208	0.04060045538121712	4				NaN	NaN	0	NaN	8173	3297	11467
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11473	30.638	NaN	8704	30	0	4055.7	0.106	+			24984	LLDTGTTPV	9	63	458.75256034945863	NaN	0	458.7525634765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LLDTGTTPV_	BTAF1|p.Q569Sfs*23|1|0.36|ENSG00000095564|chr10:91980503-91980503|T/-|frameshift_variant;ENSG00000095564|ENST00000265990|BTAF1	50.0245360154114	0.20652386741182333	4				NaN	NaN	0	NaN	8174	3297	11467
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11474	30.64	NaN	3714.4	30	0	2101	0.031			+	24579	LGPGAQLV	8	36	377.72628755696275	753.4380221807255	2	377.7262878417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LGPGAQLV_	REV__ENSG00000197037|ENST00000394152|ZSCAN25;REV__ENST00000473646.5_1_7:99214596-99221826:+|nuORF	26.79610172149135	0.7524337208463756	4				NaN	NaN	0	NaN	8175	3297	11467
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11491	30.674	NaN	58444	30	0	8119.2	0.208	+			16014	HASDRIIAL	9	98	498.28505152234004	994.5555501114801	2	498.2850036621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HASDRIIAL_	ENSG00000163931|ENST00000462138|TKT;ENST00000460343.5_1_3:53261754-53265639:-|nuORF;ENST00000461139.5_1_3:53259774-53265639:-|nuORF;ENST00000469678.1_1_3:53259917-53265542:-|nuORF;nc|ENSG00000163931|P29401-2|TKT	90.60085204095205	0.06317133949006545	4				NaN	NaN	0	NaN	8189	3300	11490
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11492	30.677	NaN	7218	30	0	1268	0.106	+			17811	IEVNKSGTV	9	67	473.7634656852763	945.5123784373526	2	473.76361083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IEVNKSGTV_	SERPINE1|p.E353K|1|0.29|ENSG00000106366|chr7:101135771-101135771|G/A|missense_variant	87.69643885390035	0.07135982304947239	4				NaN	NaN	0	NaN	8190	3300	11490
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11493	30.679	NaN	5126.9	30	0	2532.2	0.106				-1	FTSPIMTKS	9	59	514.2612819645291	1026.508010995858	2	514.2616577148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_FTSPIM(Oxidation (M))TKS_	ENSG00000181143|ENST00000397910|MUC16;MUC16|p.F10843Sfs*11|1|0.22|ENSG00000181143|chr19:8938427-8938427|A/-|frameshift_variant;MUC16|p.K6604Rfs*26|1|0.27|ENSG00000181143|chr19:8956959-8956959|T/-|frameshift_variant;MUC16|p.L8270Wfs*63|1|0.04|ENSG00000181143|chr19:8951962-8951963|-/ACCA|frameshift_variant;MUC16|p.N9430Tfs*13|1|0.14|ENSG00000181143|chr19:8948481-8948481|T/-|frameshift_variant;MUC16|p.S6098Wfs*23|1|0.17|ENSG00000181143|chr19:8958477-8958478|-/GGTGACATCTCTTGGCCAACTGACCCTGGACACATCAACC|frameshift_variant;MUC16|p.S6614Lfs*30|1|0.04|ENSG00000181143|chr19:8956931-8956932|-/A|frameshift_variant;MUC16|p.S7713Lfs*5|1|0.45|ENSG00000181143|chr19:8953634-8953634|G/-|frameshift_variant;MUC16|p.T7968Nfs*2|1|0.41|ENSG00000181143|chr19:8952867-8952868|-/T|frameshift_variant;MUC16|p.T8791Qfs*38|1|0.31|ENSG00000181143|chr19:8950403-8950403|G/-|frameshift_variant	47.657333605630114	0.33044192980041115	4				NaN	NaN	0	NaN	8191	3300	11490
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11494	30.681	NaN	2168.6	30	0	321.6	0.106	+			33462	RIQLPVVSK	9	63	520.3344398382944	1038.6543267433888	2	520.33447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RIQLPVVSK_	chr10:128113602-128116491|398|11.56|0.71|4.03|-|ENST00000368653|MKI67,MKI67;ENSG00000148773|ENST00000368654|MKI67;MKI67|p.K319Rfs*27|1|0.35|ENSG00000148773|chr10:128115454-128115454|C/-|frameshift_variant;MKI67|p.L2374*|1|0.28|ENSG00000148773|chr10:128104719-128104719|A/-|frameshift_variant;MKI67|p.L783Hfs*49|1|0.05|ENSG00000148773|chr10:128110447-128110448|-/TG|frameshift_variant;MKI67|p.L783Yfs*49|1|0.05|ENSG00000148773|chr10:128110446-128110447|-/GT|frameshift_variant;MKI67|p.R3036Yfs*27|1|0.04|ENSG00000148773|chr10:128102735-128102736|-/AAAATAA|frameshift_variant;MKI67|p.T672Nfs*4|1|0.25|ENSG00000148773|chr10:128112000-128112001|-/T|frameshift_variant;nc|ENSG00000148773|P46013-2|MKI67	70.39856735676683	0.13906523160059378	4				NaN	NaN	0	NaN	8192	3300	11490
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11495	30.683	NaN	4811.6	30	0	1452.8	0.106			+	44709	TTKLILQKLS	10	46	382.2479716887516	1143.7220856664549	3	382.2480163574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TTKLILQKLS_	REV__ENSG00000133858|ENST00000378743|ZFC3H1;REV__nc|ENSG00000133858|O60293-2|ZFC3H1;REV__ZFC3H1|p.L1693Ffs*10|1|0.1|ENSG00000133858|chr12:71619380-71619381|-/A|frameshift_variant	21.68575002086885	0.7027366847906487	4				NaN	NaN	0	NaN	8193	3300	11490
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11496	30.685	NaN	2127.2	30	0	301.11	0.106	+			31843	QPSTSIWEC	9	54	525.7313630933289	1049.4481732534578	2	525.7313232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QPSTSIWEC_	ENSG00000189319|ENST00000337318|FAM53B;ENST00000494792.1_1_10:126307332-126395327:-|nuORF;nc|ENSG00000189319|Q14153-2|FAM53B	47.657333605630114	0.33044192980041115	4				NaN	NaN	0	NaN	8194	3300	11490
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11497	30.686	NaN	1969.6	30	0	189.66	0.035	+			41657	SVRALVDLQ	9	65	500.79278084336346	999.5710087535269	2	500.7928161621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVRALVDLQ_	ARID5A-CNNM4|1|fusion;ENSG00000158158|ENST00000377075|CNNM4;nc|ENSG00000158158|Q6P4Q7-2|CNNM4	47.95952297671804	0.32689736945648856	4				NaN	NaN	0	NaN	8195	3300	11490
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11512	30.718	NaN	18216	30	0	2242.2	0.214	+			25546	LPVFYFAR	8	87	506.786631970038	NaN	0	506.7871398925781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LPVFYFAR_	ENSG00000172046|ENST00000417901|USP19;nc|ENSG00000172046|O94966-3|USP19;nc|ENSG00000172046|O94966-4|USP19;nc|ENSG00000172046|O94966-5|USP19;nc|ENSG00000172046|O94966-7|USP19;nc|ENSG00000172046|O94966|USP19	74.51659920185547	1.7418937515398478	4				NaN	NaN	0	NaN	8207	3303	11511
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11513	30.722	NaN	4494.7	30	0	1089.6	0.106	+			49601	VYGKVDSF	8	67	457.7340830449248	913.4536131566496	2	457.7342529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYGKVDSF_	ENSG00000152127|ENST00000281923|MGAT5	60.97194046774394	0.49215940876911696	4				NaN	NaN	0	NaN	8208	3303	11511
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11514	30.724	NaN	2183.2	30	0	370.69	0.106			+	8459	EASAPNLKP	9	56	463.7501551716746	925.4857574101492	2	463.7501220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EASAPNLKP_	REV__ENSG00000134709|ENST00000371208|HOOK1;REV__ENST00000466803.1_1_1:60330814-60338634:+|nuORF;REV__nc|ENSG00000134709|Q9UJC3-2|HOOK1	66.42927471994793	0.16001998865088202	4				NaN	NaN	0	NaN	8209	3303	11511
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11515	30.725	NaN	1182.3	30	0	90.871	0.106	+			5655	AVDNADPILK	10	55	528.2905883789062	NaN	0	528.2905883789062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVDNADPILK_	AGL|p.K1407Nfs*8|1|0.39|ENSG00000162688|chr1:99915441-99915441|A/-|frameshift_variant;AGL|p.N1304Ifs*10|1|0.38|ENSG00000162688|chr1:99912472-99912472|A/-|frameshift_variant;AGL|p.N1304Kfs*7|1|0.38|ENSG00000162688|chr1:99912471-99912472|-/A|frameshift_variant;ENSG00000162688|ENST00000361915|AGL;nc|ENSG00000162688|P35573-2|AGL;nc|ENSG00000162688|P35573-3|AGL	56.632244143249146	0.2617798060632103	4				NaN	NaN	0	NaN	8210	3303	11511
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11516	30.727	NaN	936.19	30	0	75.992	0.106			+	31420	QKLTLTAP	8	44	436.2658386230469	NaN	0	436.2658386230469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QKLTLTAP_	REV__ENSG00000083099|ENST00000523377|LYRM2	26.79610172149135	1.7418937515398478	4				NaN	NaN	0	NaN	8211	3303	11511
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11517	30.729	NaN	944.2	30	0	225.9	0.037	+			11830	FSVSSASLVEV	11	31	562.7964477539062	NaN	0	562.7964477539062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FSVSSASLVEV_	ENSG00000170606|ENST00000304858|HSPA4;HSPA4|p.S737Afs*9|1|0.18|ENSG00000170606|chr5:133103911-133103911|A/-|frameshift_variant	14.137123925751023	0.456735970842152	4				NaN	NaN	0	NaN	8212	3303	11511
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11518	30.73	NaN	1081.1	30	0	120.91	0.14			+	31960	QQSSAKENE	9	54	510.7344665527344	NaN	0	510.7344665527344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QQSSAKENE_	REV__ENSG00000197935|ENST00000377179|ZNF311;REV__ENST00000483450.1_1_6:28962780-28967471:-|nuORF;REV__ZNF311|p.T306Ifs*11|1|0.04|ENSG00000197935|chr6:28996085-28996086|-/GAGA|frameshift_variant;REV__ZNF311|p.T324Pfs*83|1|0.41|ENSG00000197935|chr6:28996032-28996032|T/-|frameshift_variant	31.634271133179894	0.31785226469614103	4				NaN	NaN	0	NaN	8213	3303	11511
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11536	30.768	NaN	39257	30	0	10667	0.214	+			34888	SAAAALVLK	9	76	422.2684360317026	842.5223191302052	2	422.2683410644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAAAALVLK_	ENSG00000137076|ENST00000314888|TLN1;nc|ENSG00000137076|Q9Y490-2|TLN1;TLN1|p.P1628Rfs*20|1|0.44|ENSG00000137076|chr9:35707144-35707144|G/-|frameshift_variant	171.38481719736927	0.0025305361306121837	4				NaN	NaN	0	NaN	8228	3306	11535
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11537	30.772	NaN	7326.2	30	0	772.62	0.035	+			34545	RVLDALVAR	9	76	506.8165114676973	1011.6184700021946	2	506.8162841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RVLDALVAR_	ENSG00000181029|ENST00000596148|TRAPPC5	78.26377905018397	0.10505600812668463	4				NaN	NaN	0	NaN	8229	3306	11535
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11555	30.808	NaN	6667.9	30	0	1521.4	0.214	+			44411	TSLPSAICK	9	59	460.2495590165311	918.4845650998623	2	460.2492370605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSLPSAICK_	ENSG00000177731|ENST00000327031|FLII;ENST00000578101.5_1_17:18148454-18160363:-|nuORF;FLII|p.K628Rfs*27|1|0.37|ENSG00000177731|chr17:18249178-18249178|T/-|frameshift_variant;FLII|p.S470Afs*32|1|0.36|ENSG00000177731|chr17:18251454-18251454|G/-|frameshift_variant;nc|ENSG00000177731|Q13045-2|FLII;nc|ENSG00000177731|Q13045-3|FLII	79.71258880314673	0.09879134589249085	4				NaN	NaN	0	NaN	8244	3309	11554
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11556	30.812	NaN	6765.2	30	0	2594.3	0.106			+	18402	IRSCLTPRMS	10	51	582.305150615399	1162.595748297598	2	582.3060302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IRSCLTPRMS_	REV__ENSG00000140553|ENST00000418476|UNC45A;REV__ENST00000471780.1_1_15:91493362-91496943:+|nuORF;REV__ENST00000487875.5_1_15:91491769-91496943:+|nuORF;REV__nc|ENSG00000140553|Q9H3U1-2|UNC45A;REV__nc|ENSG00000140553|Q9H3U1-3|UNC45A	19.1035232394073	0.7193765342308498	4				NaN	NaN	0	NaN	8245	3309	11554
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11557	30.814	NaN	4791.5	30	0	1872.2	0.106	+			30466	QAEATAQTL	9	55	466.73734505445964	931.4601371757193	2	466.73724365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QAEATAQTL_	ENSG00000164694|ENST00000297267|FNDC1;FNDC1|p.R809Q|1|0.5|ENSG00000164694|chr6:159232938-159232938|G/A|missense_variant;FNDC1|p.T1443Nfs*81|2|0.16|ENSG00000164694|chr6:159239656-159239657|-/A|frameshift_variant;FNDC1|p.T1443Pfs*84|1|0.31|ENSG00000164694|chr6:159239657-159239657|A/-|frameshift_variant;nc|ENSG00000164694|Q4ZHG4-2|FNDC1	85.16082228582465	0.07850854922700509	4				NaN	NaN	0	NaN	8246	3309	11554
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11558	30.816	NaN	2283.4	30	0	262.36	0.106	+			36453	SEVKVTEL	8	54	452.7523746528218	903.4901963724436	2	452.75244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SEVKVTEL_	ENSG00000100979|ENST00000372431|PLTP;nc|ENSG00000100979|P55058-2|PLTP	58.22992032128504	0.519305013932957	4				NaN	NaN	0	NaN	8247	3309	11554
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11559	30.818	NaN	3372.1	30	0	600.71	0.106			+	-1	TLRSMRSR	8	58	511.7790393206276	1021.5435257080552	2	511.7793884277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_TLRSM(Oxidation (M))RSR_	REV__ENST00000495579.5_1_6:32094959-32095503:-|nuORF	37.15910966729921	0.6739408393984688	4				NaN	NaN	0	NaN	8248	3309	11554
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11560	30.819	NaN	1954.5	30	0	185.58	0.106	+			48393	VTIEGTSAVYK	11	58	584.3158859057338	1166.6172188782675	2	584.31640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTIEGTSAVYK_	ENSG00000125686|ENST00000300651|MED1;MED1|p.G570Vfs*9|1|0.06|ENSG00000125686|chr17:39410512-39410512|C/-|frameshift_variant;MED1|p.G814Afs*8|1|0.1|ENSG00000125686|chr17:39409779-39409780|CC/-|frameshift_variant;MED1|p.Q744Sfs*36|1|0.7|ENSG00000125686|chr17:39409991-39409991|G/-|frameshift_variant;MED1|p.S1294Yfs*16|1|0.06|ENSG00000125686|chr17:39408340-39408341|-/T|frameshift_variant;MED1|p.S616Lfs*31|1|0.21|ENSG00000125686|chr17:39410376-39410376|C/-|frameshift_variant;nc|ENSG00000125686|Q15648-3|MED1	73.90049950687481	0.20322248490973555	4				NaN	NaN	0	NaN	8249	3309	11554
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11561	30.821	NaN	893.14	30	0	71.384	0.033			+	-1	GLLNAGAPH	9	43	446.2378302471328	NaN	0	446.23760986328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))GLLNAGAPH_	REV__ENST00000458726.5_1_7:137618524-137618635:-|nuORF	33.51558372728122	0.30835390848773375	4				NaN	NaN	0	NaN	8250	3309	11554
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11575	30.851	NaN	13097	30	0	5058.2	0.214			+	5065	ATSKLITPREQ	11	50	415.2379812396985	1242.6921143192956	3	415.23822021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSKLITPREQ_	REV__ENSG00000197375|ENST00000245407|SLC22A5;REV__ENST00000461013.5_1_5:131719758-131729961:+|nuORF;REV__ENST00000475308.1_1_5:131726319-131729961:+|nuORF;REV__nc|ENSG00000197375|O76082-2|SLC22A5;REV__nc|ENSG00000197375|O76082-3|SLC22A5	22.561587123415745	0.7531385481947795	4				NaN	NaN	0	NaN	8261	3312	11574
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11576	30.854	NaN	4595.2	30	0	1624.1	0.106				-1	 	0	44	372.20153070036656	742.3885084675331	2	372.2015686035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8262	3312	11574
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11577	30.856	NaN	2560.4	30	0	600.88	0.106	+			25350	LPEKGVAAL	9	56	449.27358902297686	896.5326251127537	2	449.2735595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LPEKGVAAL_	ENSG00000109654|ENST00000338700|TRIM2;nc|ENSG00000109654|Q9C040|TRIM2;TRIM2|p.V492*|1|0.15|ENSG00000109654|chr4:153315525-153315525|G/-|frameshift_variant	96.19043198914106	0.047412499214244314	4				NaN	NaN	0	NaN	8263	3312	11574
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11578	30.858	NaN	1278.8	30	0	268.11	0.034	+			24836	LIVYYGSF	8	44	481.2552124757602	960.4958720183204	2	481.2580261230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LIVYYGSF_	ENSG00000221947|ENST00000408926|XKR9	28.2542754592877	0.7411748056684583	4				NaN	NaN	0	NaN	8264	3312	11574
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11594	30.891	NaN	18152	30	0	6967	0.214	+			29207	NVPVGKVL	8	58	413.263047761137	824.511542589074	2	413.2632141113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NVPVGKVL_	ENSG00000104517|ENST00000520539|UBR5;nc|ENSG00000104517|O95071-2|UBR5;UBR5|p.A1046Rfs*49|1|0.21|ENSG00000104517|chr8:102299518-102299519|-/G|frameshift_variant;UBR5|p.E2121Kfs*28|1|0.39|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant;UBR5|p.E2121Rfs*13|1|0.28|ENSG00000104517|chr8:102277120-102277121|-/T|frameshift_variant;UBR5|p.F2571Lfs*4|2|0.31|ENSG00000104517|chr8:102262044-102262044|A/-|frameshift_variant;UBR5|p.I1021*|1|0.41|ENSG00000104517|chr8:102300046-102300046|G/-|frameshift_variant;UBR5|p.I1021Hfs*5|1|0.23|ENSG00000104517|chr8:102300045-102300046|-/G|frameshift_variant;UBR5|p.K2120Rfs*13|1|0.24|ENSG00000104517|chr8:102277121-102277122|TT/-|frameshift_variant	40.5726180659479	0.6527593143185008	4				NaN	NaN	0	NaN	8277	3315	11593
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11595	30.894	NaN	5277.1	30	0	1499.6	0.106	+			6315	AVTDAIMSR	9	58	482.2510836316259	962.4876143300518	2	482.7582702636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVTDAIMSR_	ENSG00000162298|ENST00000377190|SYVN1;ENST00000449943.5_1_11:64897669-64899838:-|nuORF;nc|ENSG00000162298|Q86TM6-2|SYVN1;nc|ENSG00000162298|Q86TM6-3|SYVN1;SYVN1|p.N368Qfs*129|1|0.33|ENSG00000162298|chr11:65130663-65130664|-/G|frameshift_variant;SYVN1|p.N368Tfs*117|1|0.4|ENSG00000162298|chr11:65130664-65130664|G/-|frameshift_variant	56.43379154798735	0.2433427591689151	4				NaN	NaN	0	NaN	8278	3315	11593
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11596	30.896	NaN	2607.9	30	0	476.01	0.106			+	37254	SLAAAQKLL	9	62	457.7869913348368	NaN	0	457.7869567871094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLAAAQKLL_	REV__ENSG00000009780|ENST00000373954|FAM76A;REV__nc|ENSG00000009780|Q8TAV0-2|FAM76A;REV__nc|ENSG00000009780|Q8TAV0-3|FAM76A;REV__nc|ENSG00000009780|Q8TAV0-4|FAM76A;REV__nc|ENSG00000009780|Q8TAV0-5|FAM76A	37.15910966729921	0.2899585034171616	4				NaN	NaN	0	NaN	8279	3315	11593
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11597	30.898	NaN	1272.9	30	0	251.94	0.106	+			10847	FASSLVSGL	9	41	440.74169328084866	879.4688336284974	2	440.7420654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FASSLVSGL_	ENSG00000165819|ENST00000298717|METTL3;ENST00000396522.6_1_14:21967741-21972178:-|nuORF;ENST00000536201.5_1_14:21969853-21979446:-|nuORF	57.81127852772723	0.2318599694398087	4				NaN	NaN	0	NaN	8280	3315	11593
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11598	30.9	NaN	2119.5	30	0	462.24	0.106	+			37015	SIQKVIGFAK	10	38	364.2252079019964	1089.6537943061892	3	364.2254638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SIQKVIGFAK_	ENSG00000111424|ENST00000549336|VDR;ENST00000547065.1_1_12:48238531-48272768:-|nuORF;nc|ENSG00000111424|P11473-2|VDR	40.05817265558897	0.5486090488315611	4				NaN	NaN	0	NaN	8281	3315	11593
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11599	30.902	NaN	1345.2	30	0	105.99	0.106	+			38037	SPPPTAEGTS	10	54	472.22078568268785	942.4270184321757	2	472.2220458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SPPPTAEGTS_	ENSG00000169876|ENST00000306151|MUC17;ENSG00000169876|ENST00000306151|MUC17;MUC17|p.N4205Tfs*18|1|0.07|ENSG00000169876|chr7:101048918-101048918|A/-|frameshift_variant;MUC17|p.N4205Tfs*18|1|0.07|ENSG00000169876|chr7:101048918-101048918|A/-|frameshift_variant;MUC17|p.S3486Qfs*18|1|0.41|ENSG00000169876|chr7:101041869-101041870|-/C|frameshift_variant;MUC17|p.S3486Qfs*18|1|0.41|ENSG00000169876|chr7:101041869-101041870|-/C|frameshift_variant;nc|ENSG00000169876|Q685J3-2|MUC17;nc|ENSG00000169876|Q685J3-2|MUC17	27.882242232435846	0.6521336255503853	4				NaN	NaN	0	NaN	8282	3315	11593
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11600	30.903	NaN	1993.2	30	0	348.91	0.036	+			11909	FVAEQKVEY	9	55	556.7847315771415	1111.554910221083	2	556.784423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FVAEQKVEY_	ENSG00000114867|ENST00000346169|EIF4G1;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;ENST00000460829.5_1_3:184046782-184052693:+|nuORF;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1	112.41091882917199	0.026537921851008135	4				NaN	NaN	0	NaN	8283	3315	11593
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11613	30.93	NaN	2836.4	30	0	573.4	0.214	+			41421	SVNFDMTSK	9	64	514.7393224024963	1027.4640918717926	2	514.7394409179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVNFDMTSK_	ENSG00000170248|ENST00000307296|PDCD6IP;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP	61.691277971877994	0.19951612995419254	4				NaN	NaN	0	NaN	8293	3318	11612
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11614	30.934	NaN	2949	30	0	473.07	0.106	+			20434	KEVADAIRL	9	60	507.8005672599268	1013.5865815866537	2	507.80078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEVADAIRL_	ENSG00000078808|ENST00000360001|SDF4;nc|ENSG00000078808|Q9BRK5-2|SDF4;nc|ENSG00000078808|Q9BRK5-3|SDF4;nc|ENSG00000078808|Q9BRK5-4|SDF4;nc|ENSG00000078808|Q9BRK5-6|SDF4;nc|ENSG00000078808|Q9BRK5|SDF4	78.26377905018397	0.10505600812668463	4				NaN	NaN	0	NaN	8294	3318	11612
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11615	30.936	NaN	1911.2	30	0	168.41	0.106	+			40211	STSDKIFFH	9	63	541.2687753699138	1080.5229978066275	2	541.2697143554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STSDKIFFH_	ENSG00000163625|ENST00000295888|WDFY3;nc|ENSG00000163625|Q8IZQ1-2|WDFY3	96.0336014099291	0.047854655524928534	4				NaN	NaN	0	NaN	8295	3318	11612
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11616	30.938	NaN	2889.3	30	0	628.33	0.106				-1	 	0	36	361.72602954814624	721.4375061630925	2	361.7257995605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8296	3318	11612
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11617	30.939	NaN	1399	30	0	492.96	0.034			+	-1	STLKETLC	8	48	476.24573837927204	950.4769238253441	2	476.2436828613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_STLKETLC(Carbamidomethyl (C))_	REV__MX1|p.A324T|1|0.23|ENSG00000157601|chr21:41443828-41443828|G/A|missense_variant	37.15910966729921	0.6739408393984688	4				NaN	NaN	0	NaN	8297	3318	11612
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11635	30.976	NaN	241850	30	0	171020	0.214			+	-1	SLLCVLALLM	10	81	364.5448644939555	1090.6127640820666	3	364.5449523925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_SLLCVLALLM(Oxidation (M))_	REV__ENSG00000141316|ENST00000269053|SPACA3;REV__nc|ENSG00000141316|Q8IXA5-2|SPACA3	44.377184641726394	0.5088115166961078	4				NaN	NaN	0	NaN	8312	3321	11634
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11636	30.979	NaN	11219	30	0	1894.4	0.106	+			50170	WLCSKLGL	8	69	460.2579672586479	918.5013815840958	2	461.2546081542969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WLCSKLGL_	ENSG00000163449|ENST00000437356|TMEM169;TMEM169|p.C253Y|1|0.27|ENSG00000163449|chr2:216100406-216100406|G/A|missense_variant	35.61828744233558	0.6843154725607303	4				NaN	NaN	0	NaN	8313	3321	11634
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11637	30.981	NaN	18653	30	0	3627.7	0.106	+			6316	AVTDAIMSR	9	74	482.2510836316259	962.4876143300518	2	482.2496032714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVTDAIMSR_	ENSG00000162298|ENST00000377190|SYVN1;ENST00000449943.5_1_11:64897669-64899838:-|nuORF;nc|ENSG00000162298|Q86TM6-2|SYVN1;nc|ENSG00000162298|Q86TM6-3|SYVN1;SYVN1|p.N368Qfs*129|1|0.33|ENSG00000162298|chr11:65130663-65130664|-/G|frameshift_variant;SYVN1|p.N368Tfs*117|1|0.4|ENSG00000162298|chr11:65130664-65130664|G/-|frameshift_variant	58.2462437865262	0.22823408064396822	4				NaN	NaN	0	NaN	8314	3321	11634
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11638	30.983	NaN	19522	30	0	7425.6	0.106	+			10908	FDGRVVAK	8	73	446.25582402315416	890.4970951131083	2	446.2557067871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FDGRVVAK_	ENSG00000143183|ENST00000367881|TMCO1;nc|ENSG00000143183|Q9UM00-2|TMCO1;nc|ENSG00000143183|Q9UM00|TMCO1	98.62937762414208	0.25143494708580966	4				NaN	NaN	0	NaN	8315	3321	11634
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11639	30.985	NaN	4556.5	30	0	645.28	0.106			+	49346	VVSLFHLY	8	57	489.27476888976213	976.5349848463243	2	489.2742614746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVSLFHLY_	REV__ENSG00000167840|ENST00000250076|ZNF232;REV__ENST00000574735.1_1_17:5009121-5012368:-|nuORF	74.51659920185547	0.36926395944126233	4				NaN	NaN	0	NaN	8316	3321	11634
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11640	30.987	NaN	1974.8	30	0	218.21	0.106			+	13148	GGPHPRSPSRH	11	51	592.8061364839981	1183.597720034796	2	592.8075561523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GGPHPRSPSRH_	REV__ENSG00000188827|ENST00000294008|SLX4;REV__nc|ENSG00000188827|Q8IY92-2|SLX4;REV__SLX4|p.P1414Hfs*36|1|0.43|ENSG00000188827|chr16:3589397-3589397|G/-|frameshift_variant;REV__SLX4|p.P1420Qfs*30|1|0.59|ENSG00000188827|chr16:3589379-3589379|G/-|frameshift_variant	27.047317107675042	0.7060868989289394	4				NaN	NaN	0	NaN	8317	3321	11634
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11641	30.988	NaN	2676.6	30	0	815.06	0.034	+			3525	ASSLTIDKL	9	58	474.2736471474373	NaN	0	474.2731628417969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASSLTIDKL_	ENSG00000110777|ENST00000393067|POU2AF1;POU2AF1|p.A226V|2|0.19|ENSG00000110777|chr11:111354355-111354355|G/A|missense_variant	52.936696900407355	0.1864545979552969	4				NaN	NaN	0	NaN	8318	3321	11634
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11658	31.021	NaN	55769	30	0	20372	0.215	+			41205	SVLDSSALK	9	76	460.2579672586479	918.5013815840958	2	460.25775146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVLDSSALK_	ENSG00000197077|ENST00000358431|KIAA1671;ENST00000494730.2_1_22:25573299-25581087:+|nuORF;nc|ENSG00000197077|Q9BY89-2|KIAA1671	114.8945686534367	0.024290463251177924	4				NaN	NaN	0	NaN	8332	3324	11657
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11659	31.025	NaN	9738.1	30	0	1355.3	0.106	+			36830	SIFDGRVVAK	10	69	546.3140541584007	1090.6135553836014	2	546.3146362304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SIFDGRVVAK_	ENSG00000143183|ENST00000367881|TMCO1;nc|ENSG00000143183|Q9UM00-2|TMCO1;nc|ENSG00000143183|Q9UM00|TMCO1	74.1650062923329	0.2432923583094885	4				NaN	NaN	0	NaN	8333	3324	11657
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11660	31.027	NaN	7711.9	30	0	1223.1	0.106	+			3685	ASYVSPVLK	9	75	482.2789099407014	962.5432669482028	2	482.2787780761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASYVSPVLK_	ENSG00000160613|ENST00000320934|PCSK7;ENST00000533135.1_1_11:117079739-117089787:-|nuORF;ENST00000534529.5_1_11:117078449-117094061:-|nuORF;PCSK7|p.N663Tfs*9|1|0.18|ENSG00000160613|chr11:117206693-117206693|G/-|frameshift_variant;PCSK7|p.R560Afs*51|1|0.18|ENSG00000160613|chr11:117208910-117208910|G/-|frameshift_variant	80.45461616416974	0.09558281504443908	4				NaN	NaN	0	NaN	8334	3324	11657
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11661	31.028	NaN	8373.6	30	0	952.18	0.106	+			4422	ATIEELTEK	9	65	517.2739253819377	1032.5332978306753	2	517.2742919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATIEELTEK_	ENSG00000159140|ENST00000356577|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-4|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-7|SON;nc|ENSG00000159140|P18583-9|SON	159.27591364854348	0.004707062175358555	4				NaN	NaN	0	NaN	8335	3324	11657
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11662	31.03	NaN	6003.3	30	0	555.99	0.106	+			38120	SPVTLKEAY	9	64	504.2740155775799	1006.5334782219599	2	504.27386474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SPVTLKEAY_	ENSG00000183508|ENST00000369448|TENT5C	80.45461616416974	0.09558281504443908	4				NaN	NaN	0	NaN	8336	3324	11657
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11663	31.032	NaN	10641	30	0	3013.4	0.106				-1	 	0	61	315.2081524040929	628.4017518749858	2	315.2082824707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8337	3324	11657
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11664	31.034	NaN	2304.3	30	0	445.61	0.031	+			20637	KGGNIGAK	8	46	372.7216719475296	743.4287909618592	2	372.7212829589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KGGNIGAK_	ENSG00000133835|ENST00000510025|HSD17B4;ENST00000442060.7_1_5:118862877-118877689:+|nuORF;ENST00000515235.6_1_5:118829562-118961685:+|nuORF;HSD17B4|p.L703Ifs*15|1|0.06|ENSG00000133835|chr5:119536530-119536531|-/GAAAAATA|frameshift_variant;nc|ENSG00000133835|P51659-2|HSD17B4;nc|ENSG00000133835|P51659-3|HSD17B4	76.84663266511073	0.3498490246073164	4				NaN	NaN	0	NaN	8338	3324	11657
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11682	31.071	NaN	4289	30	0	1675.4	0.214	+			10404	EVFKERIGY	9	68	570.8059599364889	1139.5973669397777	2	570.8062133789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EVFKERIGY_	ENSG00000144426|ENST00000683969|NBEAL1;ENSG00000160796|ENST00000450053|NBEAL2;NBEAL1|p.A1274Qfs*17|1|0.1|ENSG00000144426|chr2:203135766-203135766|A/-|frameshift_variant;NBEAL1|p.D657Vfs*8|1|0.05|ENSG00000144426|chr2:203110256-203110257|-/TAAAAAA|frameshift_variant;NBEAL1|p.F1670Lfs*25|1|0.21|ENSG00000144426|chr2:203144843-203144843|T/-|frameshift_variant;NBEAL1|p.F2315Lfs*2|1|0.17|ENSG00000144426|chr2:203193900-203193900|T/-|frameshift_variant;NBEAL1|p.K2562Rfs*15|1|0.41|ENSG00000144426|chr2:203209306-203209306|A/-|frameshift_variant;NBEAL1|p.N2072Kfs*10|1|0.35|ENSG00000144426|chr2:203172825-203172826|-/A|frameshift_variant;NBEAL1|p.R472Sfs*8|1|0.06|ENSG00000144426|chr2:203107741-203107742|-/CAACATA|frameshift_variant;NBEAL1|p.S520Efs*20|1|0.39|ENSG00000144426|chr2:203107879-203107880|-/G|frameshift_variant;NBEAL1|p.T1311Nfs*3|1|0.08|ENSG00000144426|chr2:203135875-203135876|-/A|frameshift_variant;NBEAL2|p.C1705Vfs*45|1|0.24|ENSG00000160796|chr3:47002246-47002246|T/-|frameshift_variant;NBEAL2|p.P1303Lfs*63|1|0.21|ENSG00000160796|chr3:47000002-47000002|C/-|frameshift_variant;NBEAL2|p.Y1346Tfs*20|1|0.44|ENSG00000160796|chr3:47000132-47000132|T/-|frameshift_variant;nc|ENSG00000144426|Q6ZS30-1|NBEAL1;nc|ENSG00000144426|Q6ZS30|NBEAL1;nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2;nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2	51.19269402634007	0.2889735674168909	4				NaN	NaN	0	NaN	8353	3327	11681
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11683	31.075	NaN	1747.5	30	0	210.03	0.106	+			33463	RIQLPVVSK	9	63	520.3344398382944	1038.6543267433888	2	520.3350830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RIQLPVVSK_	chr10:128113602-128116491|398|11.56|0.71|4.03|-|ENST00000368653|MKI67,MKI67;ENSG00000148773|ENST00000368654|MKI67;MKI67|p.K319Rfs*27|1|0.35|ENSG00000148773|chr10:128115454-128115454|C/-|frameshift_variant;MKI67|p.L2374*|1|0.28|ENSG00000148773|chr10:128104719-128104719|A/-|frameshift_variant;MKI67|p.L783Hfs*49|1|0.05|ENSG00000148773|chr10:128110447-128110448|-/TG|frameshift_variant;MKI67|p.L783Yfs*49|1|0.05|ENSG00000148773|chr10:128110446-128110447|-/GT|frameshift_variant;MKI67|p.R3036Yfs*27|1|0.04|ENSG00000148773|chr10:128102735-128102736|-/AAAATAA|frameshift_variant;MKI67|p.T672Nfs*4|1|0.25|ENSG00000148773|chr10:128112000-128112001|-/T|frameshift_variant;nc|ENSG00000148773|P46013-2|MKI67	47.227680397652996	0.3354815899219835	4				NaN	NaN	0	NaN	8354	3327	11681
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11684	31.077	NaN	11462	30	0	4484.8	0.106	+			5463	ATYYGAFIKK	10	58	387.88143508855603	1160.6224758658682	3	387.8814392089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATYYGAFIKK_	ENSG00000071054|ENST00000324219|MAP4K4;ENSG00000141503|ENST00000355280|MINK1;ENSG00000154310|ENST00000436636|TNIK;ENST00000572330.5_1_17:4736842-4793277:+|nuORF;MAP4K4|p.G1177Efs*5|1|0.19|ENSG00000071054|chr2:101888826-101888826|G/-|frameshift_variant;MAP4K4|p.N722Mfs*3|1|0.46|ENSG00000071054|chr2:101867251-101867251|A/-|frameshift_variant;MINK1|p.D1112Gfs*17|1|0.14|ENSG00000141503|chr17:4895797-4895798|-/G|frameshift_variant;MINK1|p.E1253Rfs*14|1|0.42|ENSG00000141503|chr17:4896565-4896565|G/-|frameshift_variant;MINK1|p.F1308Lfs*15|1|0.19|ENSG00000141503|chr17:4897207-4897207|T/-|frameshift_variant;MINK1|p.I705Sfs*101|1|0.26|ENSG00000141503|chr17:4892425-4892425|A/-|frameshift_variant;nc|ENSG00000071054|O95819-2|MAP4K4;nc|ENSG00000071054|O95819-3|MAP4K4;nc|ENSG00000071054|O95819-4|MAP4K4;nc|ENSG00000071054|O95819-5|MAP4K4;nc|ENSG00000071054|O95819-6|MAP4K4;nc|ENSG00000071054|O95819|MAP4K4;nc|ENSG00000141503|Q8N4C8-2|MINK1;nc|ENSG00000141503|Q8N4C8-3|MINK1;nc|ENSG00000141503|Q8N4C8-4|MINK1;nc|ENSG00000141503|Q8N4C8-5|MINK1;nc|ENSG00000154310|Q9UKE5-2|TNIK;nc|ENSG00000154310|Q9UKE5-3|TNIK;nc|ENSG00000154310|Q9UKE5-4|TNIK;nc|ENSG00000154310|Q9UKE5-5|TNIK;nc|ENSG00000154310|Q9UKE5-6|TNIK;nc|ENSG00000154310|Q9UKE5-7|TNIK;nc|ENSG00000154310|Q9UKE5-8|TNIK;TNIK|p.E1253Kfs*13|1|0.04|ENSG00000154310|chr3:171066678-171066678|C/-|frameshift_variant;TNIK|p.F1336Lfs*15|1|0.15|ENSG00000154310|chr3:171063956-171063956|A/-|frameshift_variant;TNIK|p.K261Nfs*11|1|0.25|ENSG00000154310|chr3:171167261-171167261|T/-|frameshift_variant;TNIK|p.N93Efs*7|1|0.3|ENSG00000154310|chr3:171211146-171211147|-/T|frameshift_variant;TNIK|p.S560Ifs*2|1|0.05|ENSG00000154310|chr3:171128809-171128810|-/T|frameshift_variant;TNIK|p.V1263Cfs*3|1|0.42|ENSG00000154310|chr3:171066648-171066648|C/-|frameshift_variant	28.081489160057373	0.6505064946289502	4				NaN	NaN	0	NaN	8355	3327	11681
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11685	31.079	NaN	2071.3	30	0	182.72	0.106			+	17168	HTLRRHSIC	9	64	561.8009549610496	1121.587356988899	2	561.80126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HTLRRHSIC_	REV__ENSG00000196104|ENST00000357545|SPOCK3;REV__nc|ENSG00000196104|Q9BQ16-2|SPOCK3;REV__nc|ENSG00000196104|Q9BQ16-4|SPOCK3;REV__nc|ENSG00000196104|Q9BQ16-8|SPOCK3;REV__nc|ENSG00000196104|Q9BQ16-9|SPOCK3;REV__nc|ENSG00000196104|Q9BQ16|SPOCK3	40.77816245573522	0.41113185337114944	4				NaN	NaN	0	NaN	8356	3327	11681
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11686	31.08	NaN	2360.9	30	0	365.22	0.106	+			21291	KLRPHVPP	8	58	472.2944559363839	942.5743589395678	2	472.2947082519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KLRPHVPP_	ENST00000531005.5_1_11:65638277-65638940:-|nuORF	28.2542754592877	0.7411748056684583	4				NaN	NaN	0	NaN	8357	3327	11681
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11687	31.082	NaN	2209.4	30	0	280.5	0.106			+	48213	VTASKIEL	8	48	430.75803718226103	859.5015214313221	2	430.7577819824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTASKIEL_	REV__tr|U7T5L4|U7T5L4_FUSNUHeaddecorationproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00097PE=4SV=1	52.936696900407355	0.5717071646657654	4				NaN	NaN	0	NaN	8358	3327	11681
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11688	31.084	NaN	1399.9	30	0	280.11	0.033	+			35118	SAGSVGFLK	9	49	433.2428041488432	864.4710553644865	2	433.24237060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SAGSVGFLK_	ENSG00000156011|ENST00000327040|PSD3;nc|ENSG00000156011|Q9NYI0|PSD3;PSD3|p.D956Rfs*11|1|0.17|ENSG00000156011|chr8:18556274-18556275|-/G|frameshift_variant;PSD3|p.D956Tfs*14|1|0.29|ENSG00000156011|chr8:18556275-18556275|G/-|frameshift_variant;PSD3|p.F625Lfs*6|1|0.25|ENSG00000156011|chr8:18804557-18804557|A/-|frameshift_variant;PSD3|p.L776Wfs*44|1|0.35|ENSG00000156011|chr8:18632699-18632699|A/-|frameshift_variant;PSD3|p.V655Efs*3|1|0.1|ENSG00000156011|chr8:18801329-18801330|-/CT|frameshift_variant	58.22992032128504	0.22837015374068087	4				NaN	NaN	0	NaN	8359	3327	11681
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11705	31.119	NaN	4261.9	30	0	1116.6	0.214	+			27555	MPEKEPSVL	9	65	515.2676421822163	1028.5207314312324	2	515.26806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MPEKEPSVL_	ENSG00000155229|ENST00000438925|MMS19;ENST00000495415.5_1_10:99221527-99223714:-|nuORF;nc|ENSG00000155229|Q96T76-5|MMS19;nc|ENSG00000155229|Q96T76-8|MMS19;nc|ENSG00000155229|Q96T76-9|MMS19	56.43379154798735	0.2433427591689151	4				NaN	NaN	0	NaN	8373	3330	11704
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11706	31.123	NaN	2585.2	30	0	275.79	0.106	+			17564	IEAEKIAQV	9	61	500.7874853723291	999.5604178114583	2	500.7874755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IEAEKIAQV_	ENSG00000107566|ENST00000421367|ERLIN1	98.58198989935565	0.04066992115528678	4				NaN	NaN	0	NaN	8374	3330	11704
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11707	31.125	NaN	3797	30	0	1077.5	0.106	+			37432	SLHCAQIQVKL	11	52	413.90059109959213	1238.6799438989765	3	413.900634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLHCAQIQVKL_	DGKE|p.F486L|1|0.34|ENSG00000153933|chr17:56862185-56862185|C/A|missense_variant	24.231819034082204	0.7356191775841856	4				NaN	NaN	0	NaN	8375	3330	11704
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11708	31.126	NaN	2578.7	30	0	472.71	0.106				-1	SACSFTFSK	9	59	517.7341927475908	1033.4538325619815	2	517.7344970703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_SAC(Carbamidomethyl (C))SFTFSK_	ENSG00000131375|ENST00000253693|CAPN7;ENST00000443567.5_1_3:15282348-15292515:+|nuORF	32.75053402867276	0.49717649897795874	4				NaN	NaN	0	NaN	8376	3330	11704
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11709	31.128	NaN	3505.4	30	0	541.46	0.106	+			31933	QQPSNYGPM	9	54	511.2239336020633	1020.4333142709266	2	511.2243957519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QQPSNYGPM_	ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1	52.936696900407355	0.27249468807391813	4				NaN	NaN	0	NaN	8377	3330	11704
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11710	31.13	NaN	2987	30	0	830.4	0.035			+	-1	KSMVYELK	8	57	507.2702394810343	1012.5259260288686	2	507.270263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_KSM(Oxidation (M))VYELK_	REV__ENSG00000116191|ENST00000367635|RALGPS2;REV__ENST00000495034.5_1_1:178745899-178848128:+|nuORF;REV__nc|ENSG00000116191|Q86X27-2|RALGPS2;REV__nc|ENSG00000116191|Q86X27-3|RALGPS2;REV__RALGPS2|p.K475Sfs*4|1|0.39|ENSG00000116191|chr1:178894013-178894013|A/-|frameshift_variant	44.116797842482775	0.6307669463330267	4				NaN	NaN	0	NaN	8378	3330	11704
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11711	31.131	NaN	953.42	30	0	78.914	0.139			+	33771	RPWLRGPG	8	46	469.76860500652555	937.5226570798511	2	469.7687072753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RPWLRGPG_	REV__ENST00000268607.9_1_16:87425503-87425911:+|nuORF	31.954861631926434	0.7126016770032289	4				NaN	NaN	0	NaN	8379	3330	11704
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11728	31.168	NaN	8588.9	30	0	3416.9	0.214	+			41187	SVLDGAVVK	9	51	444.26335751415957	886.5121620951192	2	444.2632751464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVLDGAVVK_	ENSG00000111816|ENST00000606080|FRK	95.81516180277367	0.04847050768394289	4				NaN	NaN	0	NaN	8393	3333	11727
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11729	31.171	NaN	12883	30	0	4261	0.106	+			45314	TVSELVISK	9	63	488.2894990757292	974.5644452182585	2	488.28955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVSELVISK_	ENSG00000189180|ENST00000432900|ZNF33A;ENSG00000196693|ENST00000359467|ZNF33B;nc|ENSG00000189180|Q06730-3|ZNF33A;nc|ENSG00000189180|Q06730|ZNF33A;ZNF33A|p.E689Rfs*83|1|0.35|ENSG00000189180|chr10:38056188-38056188|G/-|frameshift_variant;ZNF33A|p.Y580Cfs*21|1|0.05|ENSG00000189180|chr10:38055865-38055866|-/GTGTGTGTTCTCTG|frameshift_variant	134.7655990226056	0.012935733000282069	4				NaN	NaN	0	NaN	8394	3333	11727
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11730	31.173	NaN	8081	30	0	910.79	0.106	+			19831	KEDSKLIAL	9	67	508.80279655618847	1015.591040179177	2	508.8028869628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEDSKLIAL_	ENSG00000090686|ENST00000308271|USP48;nc|ENSG00000090686|Q86UV5-2|USP48;nc|ENSG00000090686|Q86UV5-5|USP48;nc|ENSG00000090686|Q86UV5-8|USP48;USP48|p.L982Ffs*9|1|0.08|ENSG00000090686|chr1:21690037-21690038|-/GG|frameshift_variant	85.86182877749512	0.07653218437724067	4				NaN	NaN	0	NaN	8395	3333	11727
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11731	31.175	NaN	3781.8	30	0	1617.5	0.106	+			30865	QEILERTGV	9	60	522.7881890367287	NaN	0	522.788330078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QEILERTGV_	ENSG00000115677|ENST00000310931|HDLBP;ENST00000470710.1_1_2:242194755-242195742:-|nuORF;HDLBP|p.S551Kfs*2|1|0.11|ENSG00000115677|chr2:241248082-241248083|-/T|frameshift_variant	65.46538089061403	0.1260090208616529	4				NaN	NaN	0	NaN	8396	3333	11727
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11732	31.177	NaN	1920.6	30	0	167.98	0.106	+			35296	SAMDVAKAY	9	56	478.231067971838	954.447583010476	2	478.2314758300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SAMDVAKAY_	ANKEF1|p.Y712Sfs*5|1|0.07|ENSG00000132623|chr20:10054561-10054562|-/CCTGGAA|frameshift_variant;ENSG00000132623|ENST00000378392|ANKEF1	85.16082228582465	0.07850854922700509	4				NaN	NaN	0	NaN	8397	3333	11727
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11733	31.179	NaN	1556.7	30	0	194.27	0.106				-1	 	0	43	402.7014315481575	803.388310163115	2	402.7015380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8398	3333	11727
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11734	31.18	NaN	1615.5	30	0	365.47	0.034			+	7851	DQSVICNPA	9	57	473.71825859761896	NaN	0	473.71832275390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DQSVICNPA_	REV__ENSG00000135074|ENST00000257527|ADAM19;REV__nc|ENSG00000135074|Q9H013|ADAM19	34.172542307311794	0.30503706118289736	4				NaN	NaN	0	NaN	8399	3333	11727
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11749	31.212	NaN	10441	30	0	1530.3	0.214	+			48754	VTVQEMVTK	9	73	517.7806880877862	1033.5468232423723	2	517.7813110351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTVQEMVTK_	ENSG00000137076|ENST00000314888|TLN1;ENST00000486788.2_1_9:35704327-35706084:-|nuORF;nc|ENSG00000137076|Q9Y490-2|TLN1	204.78781133344324	1.3064049516750017E-05	4				NaN	NaN	0	NaN	8411	3336	11748
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11750	31.216	NaN	4959	30	0	698.67	0.106			+	41905	SVVEVMGQL	9	65	481.2552124757602	960.4958720183204	2	481.25537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVVEVMGQL_	REV__RYR3|p.A2740S|1|0.29|ENSG00000198838|chr15:33749997-33749997|G/T|missense_variant	64.20726635412375	0.17854274437659667	4				NaN	NaN	0	NaN	8412	3336	11748
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11751	31.218	NaN	3551	30	0	743.28	0.106	+			50001	WAPESAPLK	9	70	499.76870584519855	997.5228587571971	2	499.768798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_WAPESAPLK_	ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;nc|ENSG00000165410|Q9Y281-3|CFL2	69.6276240434122	0.14239879520340665	4				NaN	NaN	0	NaN	8413	3336	11748
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11752	31.219	NaN	1268.9	30	0	99.973	0.036			+	48169	VTAAALYSVGC	11	56	527.765766396805	1053.51697986041	2	528.2689208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTAAALYSVGC_	REV__ENSG00000163635|ENST00000674280|ATXN7;REV__ENST00000474112.5_1_3:63898274-63982174:+|nuORF;REV__nc|ENSG00000163635|O15265-2|ATXN7;REV__nc|ENSG00000163635|O15265-3|ATXN7	39.252832667884924	0.5681665794958463	4				NaN	NaN	0	NaN	8414	3336	11748
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11769	31.254	NaN	30474	30	0	12868	0.215	+			37382	SLFSSKLST	9	62	485.26617342467176	968.5177939161435	2	485.2657470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLFSSKLST_	ENSG00000058804|ENST00000371429|NDC1;nc|ENSG00000058804|Q9BTX1-2|NDC1;nc|ENSG00000058804|Q9BTX1-4|NDC1;nc|ENSG00000058804|Q9BTX1-5|NDC1;nc|ENSG00000058804|Q9BTX1-6|NDC1	82.24051045832904	0.08786059719216216	4				NaN	NaN	0	NaN	8428	3339	11768
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11770	31.258	NaN	2662.9	30	0	1674.5	0.106	+			45773	VAGAEIPS	8	42	372.20157654099364	NaN	0	372.2014465332031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VAGAEIPS_	ENSG00000143341|ENST00000271588|HMCN1;HMCN1|p.G3718Afs*6|1|0.04|ENSG00000143341|chr1:186113995-186113995|G/-|frameshift_variant;HMCN1|p.L3491Hfs*10|1|0.12|ENSG00000143341|chr1:186095419-186095420|-/ATAT|frameshift_variant;HMCN1|p.S4801Rfs*11|1|0.07|ENSG00000143341|chr1:186145536-186145537|-/AGAATAA|frameshift_variant;nc|ENSG00000143341|Q96RW7-2|HMCN1	21.70233525837049	1.7418937515398478	4				NaN	NaN	0	NaN	8429	3339	11768
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11771	31.26	NaN	5458.7	30	0	619.26	0.034	+			2502	APSVVKVSY	9	59	475.2719575339104	948.5293621346208	2	475.2709045410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_APSVVKVSY_	ENSG00000127616|ENST00000344626|SMARCA4;ENST00000592604.5_1_19:11123597-11172489:+|nuORF;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;nc|ENSG00000127616|P51532-5|SMARCA4;SMARCA4|p.G1136Afs*4|1|0.27|ENSG00000127616|chr19:11030751-11030751|G/-|frameshift_variant;SMARCA4|p.P1453Lfs*10|1|0.31|ENSG00000127616|chr19:11041491-11041491|C/-|frameshift_variant	88.17693792209575	0.07000514020414955	4				NaN	NaN	0	NaN	8430	3339	11768
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11786	31.291	NaN	10065	30	0	3896.8	0.214				-1	 	0	44	350.20663382964136	698.3987147260827	2	350.20672607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8442	3342	11785
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11787	31.295	NaN	1936.7	30	0	109.44	0.106	+			163	AAISQLLPN	9	62	463.7687629715532	925.5229730099064	2	463.7678527832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAISQLLPN_	ENSG00000127585|ENST00000397621|FBXL16;nc|ENSG00000127585|Q8N461-2|FBXL16	56.72105179125745	0.24094814563026265	4				NaN	NaN	0	NaN	8443	3342	11785
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11788	31.297	NaN	1580.5	30	0	117.1	0.106	+			10772	FAGKVLRL	8	56	452.29177501737206	NaN	0	452.29193115234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FAGKVLRL_	ENSG00000130560|ENST00000371756|UBAC1	55.50420428727701	1.7418937515398478	4				NaN	NaN	0	NaN	8444	3342	11785
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11789	31.299	NaN	1086.2	30	0	93.863	0.106	+			42909	TEHYDIPKV	9	46	551.2824096679688	NaN	0	551.2824096679688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TEHYDIPKV_	ENSG00000105058|ENST00000263384|FAM32A;nc|ENSG00000105058|Q9Y421-3|FAM32A	56.72105179125745	0.16330365735109603	4				NaN	NaN	0	NaN	8445	3342	11785
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11790	31.301	NaN	985.69	30	0	61.266	0.035				-1	VPNSDPPCY	9	48	524.723734607142	1047.4329162810839	2	524.7243041992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_VPNSDPPC(Carbamidomethyl (C))Y_	ENST00000427910.1_1_X:35077528-35077942:+|nuORF	26.69291269510374	0.5537881896960711	4				NaN	NaN	0	NaN	8446	3342	11785
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11802	31.326	NaN	8133.2	30	0	5416.9	0.214			+	37442	SLIAMLVVVM	10	34	364.5448644939555	1090.6127640820666	3	364.5452880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_SLIAM(Oxidation (M))LVVVM_	REV__ENSG00000145495|ENST00000274140|MARCHF6;REV__nc|ENSG00000145495|O60337-5|MARCHF6;REV__nc|ENSG00000145495|O60337-6|MARCHF6	45.97224482568171	0.49411383603842696	4				NaN	NaN	0	NaN	8455	3345	11801
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11803	31.329	NaN	3251.4	30	0	670.47	0.106	+			1121	AELNTHVNV	9	68	498.7584362802073	995.5023196272147	2	498.7582092285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AELNTHVNV_	ENSG00000196141|ENST00000409140|SPATS2L;ENST00000459656.5_1_2:201171456-201254069:+|nuORF;nc|ENSG00000196141|Q9NUQ6-2|SPATS2L;nc|ENSG00000196141|Q9NUQ6-3|SPATS2L;nc|ENSG00000196141|Q9NUQ6-4|SPATS2L	40.77816245573522	0.41113185337114944	4				NaN	NaN	0	NaN	8456	3345	11801
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11804	31.331	NaN	1347.6	30	0	337.21	0.106			+	25241	LNGVFVSR	8	53	446.25582402315416	890.4970951131083	2	446.2562561035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LNGVFVSR_	REV__ENSG00000188739|ENST00000408888|RBM34;REV__ENST00000495224.1_1_1:235295030-235299397:-|nuORF	31.954861631926434	0.7126016770032289	4				NaN	NaN	0	NaN	8457	3345	11801
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11805	31.333	NaN	2723.8	30	0	796.75	0.106	+			3272	ASLPGGVLK	9	39	421.26066572976	840.50677852632	2	421.26116943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASLPGGVLK_	ENSG00000185477|ENST00000609438|GPRIN3;GPRIN3|p.Q666Afs*23|1|0.42|ENSG00000185477|chr4:89248116-89248117|-/T|frameshift_variant	44.116797842482775	0.37197099687881774	4				NaN	NaN	0	NaN	8458	3345	11801
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11806	31.335	NaN	1136.1	30	0	447.26	0.106				-1	 	0	32	358.1857550030103	714.3569570728206	2	358.1859436035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8459	3345	11801
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11807	31.337	NaN	1361	30	0	286	0.036	+			49466	VVYEFSTTK	9	52	537.2797536126791	1072.544954292158	2	537.2798461914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VVYEFSTTK_	ENSG00000164151|ENST00000296564|ICE1;ICE1|p.H1965Afs*55|1|0.29|ENSG00000164151|chr5:5465219-5465220|-/A|frameshift_variant	54.776311868738084	0.25715957988447635	4				NaN	NaN	0	NaN	8460	3345	11801
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11808	31.337	NaN	1129.6	30	0	237.25	0.139	+			18333	IPVGTHEF	8	47	450.234635143882	898.454717354564	2	450.23492431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IPVGTHEF_	ENSG00000273749|ENST00000617928|CYFIP1;KBTBD2-CYFIP1|1|fusion;nc|ENSG00000273749|Q7L576-2|CYFIP1;nc|ENSG00000273749|Q7L576-3|CYFIP1	50.0245360154114	0.5941082100236891	4				NaN	NaN	0	NaN	8461	3345	11801
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11825	31.374	NaN	18200	30	0	2290.7	0.214	+			4653	ATLQEALAH	9	78	477.2559491158605	952.497345298521	2	477.2558288574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATLQEALAH_	ENSG00000137497|ENST00000393695|NUMA1;nc|ENSG00000137497|Q14980-2|NUMA1;nc|ENSG00000137497|Q14980-3|NUMA1;nc|ENSG00000137497|Q14980-4|NUMA1;NUMA1|p.K1766Rfs*2|1|0.39|ENSG00000137497|chr11:72007357-72007357|G/-|frameshift_variant;NUMA1|p.L1786Pfs*18|1|0.23|ENSG00000137497|chr11:72007295-72007296|-/G|frameshift_variant	141.52041321563706	0.009766778904176347	4				NaN	NaN	0	NaN	8475	3348	11824
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11826	31.378	NaN	2087.5	30	0	1249.4	0.106				-1	 	0	31	336.1909813405099	670.3674097478198	2	336.191162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8476	3348	11824
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11827	31.38	NaN	2936.4	30	0	748.35	0.106	+			40798	SVDSLPLAK	9	50	465.26862900524367	928.5227050772874	2	465.2683410644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVDSLPLAK_	ENSG00000110723|ENST00000265843|EXPH5;nc|ENSG00000110723|Q8NEV8-2|EXPH5	54.776311868738084	0.25715957988447635	4				NaN	NaN	0	NaN	8477	3348	11824
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11828	31.382	NaN	2162.5	30	0	535.14	0.106	+			2294	AMAPLLPPAM	10	61	506.270957900976	1010.527362868752	2	506.270751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AMAPLLPPAM_	ENST00000361937.7_1_15:41388526-41408484:-|nuORF	65.89745868150666	0.31220354485832413	4				NaN	NaN	0	NaN	8478	3348	11824
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11829	31.383	NaN	1420.2	30	0	198.37	0.106			+	45380	TVTITSNV	8	49	417.7318420410156	NaN	0	417.7318420410156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TVTITSNV_	REV__DOCK11|p.E284Gfs*9|1|0.24|ENSG00000147251|chrX:118566152-118566153|-/A|frameshift_variant;REV__DOCK11|p.K283Rfs*4|1|0.69|ENSG00000147251|chrX:118566153-118566153|A/-|frameshift_variant;REV__ENSG00000147251|ENST00000276202|DOCK11	47.91560031466742	1.7418937515398478	4				NaN	NaN	0	NaN	8479	3348	11824
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11830	31.385	NaN	3426	30	0	874.83	0.038	+			33111	REMDEQIRL	9	62	595.3023976625194	1188.5902423918387	2	595.3040771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_REMDEQIRL_	ENST00000413233.1_1_7:116612221-116612569:-|nuORF;ENST00000600996.1_1_19:42012510-42012810:+|nuORF;nc|ENSG00000143549|P06753-2|TPM3;nc|ENSG00000143549|P06753-3|TPM3;nc|ENSG00000143549|P06753-6|TPM3	106.68306549817024	0.032382560583716295	4				NaN	NaN	0	NaN	8480	3348	11824
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11831	31.386	NaN	1113.5	30	0	103.69	0.141	+			11177	FGSKDSDL	8	45	434.705078125	NaN	0	434.705078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FGSKDSDL_	ENSG00000121892|ENST00000303538|PDS5A;ENST00000508625.1_1_4:39911831-39915298:-|nuORF;nc|ENSG00000121892|Q29RF7-3|PDS5A	37.15910966729921	1.7418937515398478	4				NaN	NaN	0	NaN	8481	3348	11824
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11848	31.424	NaN	2011.1	30	0	186.91	0.214	+			40445	STVNRVSFS	9	63	498.75823974609375	NaN	0	498.75823974609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STVNRVSFS_	ENSG00000255833|ENST00000537858|TIFAB	20.94693142431847	0.3660861156085067	4				NaN	NaN	0	NaN	8495	3351	11847
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11849	31.427	NaN	3169.6	30	0	548.81	0.033	+			21460	KNGESLSM	8	53	433.20785856156795	864.4011641899359	2	433.20867919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KNGESLSM_	ENSG00000197969|ENST00000360280|VPS13A;nc|ENSG00000197969|Q96RL7-2|VPS13A;nc|ENSG00000197969|Q96RL7-3|VPS13A;nc|ENSG00000197969|Q96RL7-4|VPS13A;VPS13A|p.N2071Tfs*18|2|0.32|ENSG00000197969|chr9:77337367-77337367|A/-|frameshift_variant;VPS13A|p.Y2315Ifs*2|1|0.09|ENSG00000197969|chr9:77340463-77340463|T/-|frameshift_variant	73.97473282117947	0.3737790450121076	4				NaN	NaN	0	NaN	8496	3351	11847
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11867	31.464	NaN	29638	30	0	3247.2	0.214	+			16109	HDLVIKSL	8	86	462.77906707979787	923.5435812263958	2	462.7789611816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HDLVIKSL_	ENSG00000100342|ENST00000397278|APOL1;nc|ENSG00000100342|O14791-2|APOL1;nc|ENSG00000100342|O14791-3|APOL1	157.32903759742106	0.1177781622133242	4				NaN	NaN	0	NaN	8511	3354	11866
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11868	31.468	NaN	27283	30	0	5831.3	0.106	+			47938	VSMDYAISK	9	79	507.25190866741417	1012.4892644016284	2	507.2523498535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSMDYAISK_	ENSG00000196453|ENST00000247930|ZNF777;ZNF777|p.P504Rfs*5|1|0.44|ENSG00000196453|chr7:149432761-149432761|G/-|frameshift_variant	146.78539889680295	0.007618400906539062	4				NaN	NaN	0	NaN	8512	3354	11866
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11869	31.47	NaN	5839.5	30	0	1614.7	0.106	+			27394	MKNLLTEK	8	61	488.77792668147	975.54130042974	2	488.7781982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MKNLLTEK_	ENSG00000198089|ENST00000400288|SFI1;ENST00000382162.7_1_22:31904270-32000328:+|nuORF;ENST00000465437.5_1_22:31904270-31924785:+|nuORF;ENST00000465646.5_1_22:31904270-31924850:+|nuORF;nc|ENSG00000198089|A8K8P3-10|SFI1;nc|ENSG00000198089|A8K8P3-2|SFI1;nc|ENSG00000198089|A8K8P3-3|SFI1;nc|ENSG00000198089|A8K8P3-4|SFI1;nc|ENSG00000198089|A8K8P3-5|SFI1;nc|ENSG00000198089|A8K8P3-9|SFI1	66.42927471994793	0.4381325844043345	4				NaN	NaN	0	NaN	8513	3354	11866
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11870	31.472	NaN	2360.3	30	0	247.19	0.106	+			22032	KSIDFPLTK	9	67	524.8053298414776	1047.596106749755	2	524.8057250976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KSIDFPLTK_	ENSG00000084073|ENST00000372759|ZMPSTE24	45.908116695636124	0.35095954387056183	4				NaN	NaN	0	NaN	8514	3354	11866
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11871	31.474	NaN	2425	30	0	1104.8	0.106				-1	TKLRKMVD	8	52	503.78757455191493	1005.5605961706299	2	503.78717041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_TKLRKM(Oxidation (M))VD_	ENSG00000263001|ENST00000573035|GTF2I;ENST00000544802.5_1_7:72593260-72619478:+|nuORF;nc|ENSG00000263001|P78347-2|GTF2I;nc|ENSG00000263001|P78347-3|GTF2I;nc|ENSG00000263001|P78347-4|GTF2I	33.51558372728122	0.7005509609380386	4				NaN	NaN	0	NaN	8515	3354	11866
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11872	31.475	NaN	1724.6	30	0	279.77	0.106			+	-1	EAMIDKPPI	9	55	515.2676421822163	1028.5207314312324	2	515.2675170898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_EAM(Oxidation (M))IDKPPI_	REV__ASXL3|p.P2037Hfs*43|1|0.33|ENSG00000141431|chr18:33745951-33745951|C/-|frameshift_variant;REV__ASXL3|p.V876Cfs*59|3|0.42|ENSG00000141431|chr18:33740022-33740022|A/-|frameshift_variant;REV__ENSG00000141431|ENST00000269197|ASXL3	52.936696900407355	0.27249468807391813	4				NaN	NaN	0	NaN	8516	3354	11866
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11873	31.477	NaN	3299.4	30	0	2043.2	0.034	+			18075	IKGDGEVLE	9	51	480.2556425918725	958.496732250545	2	480.2557678222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IKGDGEVLE_	chr12:122982045-122982469|268|100.74|0.0|23.26|+|1|None,ARL6IP4|1;ENSG00000182196|ENST00000315580|ARL6IP4;ENST00000442210.2_1_12:123465790-123467130:+|nuORF;ENST00000539576.5_1_12:123466944-123467220:+|nuORF;ENST00000540708.5_1_12:123466944-123467130:+|nuORF;nc|ENSG00000182196|Q66PJ3-1|ARL6IP4;nc|ENSG00000182196|Q66PJ3-10|ARL6IP4;nc|ENSG00000182196|Q66PJ3-2|ARL6IP4;nc|ENSG00000182196|Q66PJ3-3|ARL6IP4;nc|ENSG00000182196|Q66PJ3-4|ARL6IP4;nc|ENSG00000182196|Q66PJ3-5|ARL6IP4;nc|ENSG00000182196|Q66PJ3-7|ARL6IP4;nc|ENSG00000182196|Q66PJ3-9|ARL6IP4	67.49366992349736	0.1516260258713357	4				NaN	NaN	0	NaN	8517	3354	11866
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11889	31.51	NaN	17529	30	0	7981.8	0.214	+			7387	DDVTVITNL	9	60	495.2608942623249	988.5072355914498	2	495.2611389160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DDVTVITNL_	ENSG00000145934|ENST00000518659|TENM2;nc|ENSG00000145934|Q9NT68-2|TENM2;TENM2|p.R1740C|1|0.17|ENSG00000145934|chr5:168226197-168226197|C/T|missense_variant	27.882242232435846	0.5426732730940306	4				NaN	NaN	0	NaN	8530	3357	11888
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11890	31.513	NaN	7032.8	30	0	1021.2	0.106	+			46507	VEVEKESVL	9	66	516.2845971434174	1030.5546413536347	2	516.2850952148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VEVEKESVL_	ENSG00000156017|ENST00000376834|CARNMT1	70.8162118820467	0.13725933411854815	4				NaN	NaN	0	NaN	8531	3357	11888
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11891	31.515	NaN	2741.4	30	0	516.85	0.106	+			6791	CFQAASSTM	9	55	501.7045537507992	1001.3945545683985	2	501.7042541503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_C(Carbamidomethyl (C))FQAASSTM_	ENSG00000112685|ENST00000230449|EXOC2	56.72105179125745	0.24094814563026265	4				NaN	NaN	0	NaN	8532	3357	11888
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11892	31.517	NaN	1861.4	30	0	317.46	0.034			+	-1	VSKQMPTL	8	43	460.2499920968747	NaN	0	460.249755859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_VSKQM(Oxidation (M))PTL_	REV__ENSG00000109171|ENST00000264313|SLAIN2	53.351449002276354	1.7418937515398478	4				NaN	NaN	0	NaN	8533	3357	11888
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11907	31.549	NaN	3717.6	30	0	392.81	0.214	+			16049	HAVVLLTHY	9	65	526.7978664900673	1051.5811800469346	2	526.7984619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HAVVLLTHY_	ENSG00000080546|ENST00000436639|SESN1;nc|ENSG00000080546|Q9Y6P5-3|SESN1;nc|ENSG00000080546|Q9Y6P5|SESN1	123.9887779854562	0.018785054595953452	4				NaN	NaN	0	NaN	8545	3360	11906
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11908	31.552	NaN	4007.7	30	0	2548.1	0.106	+			36722	SGTTVIHL	8	51	414.23457357331165	826.4545942134233	2	414.2346496582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SGTTVIHL_	ENSG00000196159|ENST00000394329|FAT4;FAT4|p.D3606Sfs*31|1|0.07|ENSG00000196159|chr4:125451831-125451832|-/AGTAAAGG|frameshift_variant;FAT4|p.E3388Gfs*4|1|0.35|ENSG00000196159|chr4:125451179-125451179|A/-|frameshift_variant;FAT4|p.E4539Rfs*31|1|0.12|ENSG00000196159|chr4:125490431-125490431|C/-|frameshift_variant;FAT4|p.K4477Rfs*15|1|0.36|ENSG00000196159|chr4:125490247-125490247|G/-|frameshift_variant;FAT4|p.K4532Efs*21|1|0.37|ENSG00000196159|chr4:125490410-125490411|-/G|frameshift_variant;FAT4|p.K4532Rfs*38|1|0.19|ENSG00000196159|chr4:125490411-125490411|G/-|frameshift_variant;FAT4|p.L3734Ffs*22|1|0.27|ENSG00000196159|chr4:125452211-125452212|-/T|frameshift_variant;FAT4|p.L3734Yfs*8|2|0.3|ENSG00000196159|chr4:125452212-125452212|T/-|frameshift_variant;FAT4|p.Q4906Rfs*14|1|0.49|ENSG00000196159|chr4:125491536-125491536|C/-|frameshift_variant;FAT4|p.T3555Pfs*6|1|0.21|ENSG00000196159|chr4:125451679-125451679|A/-|frameshift_variant;nc|ENSG00000196159|Q6V0I7-2|FAT4;nc|ENSG00000196159|Q6V0I7-3|FAT4;nc|ENSG00000196159|Q6V0I7|FAT4	55.50420428727701	0.5462892107279674	4				NaN	NaN	0	NaN	8546	3360	11906
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11909	31.554	NaN	3597	30	0	395.15	0.106			+	25883	LSGALLICG	9	66	452.2528605034156	902.4911680736312	2	452.2536926269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LSGALLIC(Carbamidomethyl (C))G_	REV__ENSG00000198569|ENST00000673835|SLC34A3	68.484700416344	0.1473408039581241	4				NaN	NaN	0	NaN	8547	3360	11906
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11910	31.556	NaN	4989.6	30	0	403.39	0.106	+			35138	SAIAAVIAR	9	56	436.271275111232	870.527997289264	2	436.27130126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SAIAAVIAR_	ENSG00000165949|ENST00000612813|IFI27;nc|ENSG00000165949|P40305-1|IFI27;nc|ENSG00000165949|P40305-3|IFI27;nc|ENSG00000165949|P40305-4|IFI27	98.62937762414208	0.04060045538121712	4				NaN	NaN	0	NaN	8548	3360	11906
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11911	31.558	NaN	2339.2	30	0	281.79	0.106	+			46022	VAVQVRAL	8	58	428.27432386879667	854.5340948043934	2	428.27410888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VAVQVRAL_	ENST00000561142.5_1_14:24605441-24607359:+|nuORF	83.28718786952967	0.2977916691876266	4				NaN	NaN	0	NaN	8549	3360	11906
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11912	31.56	NaN	539.64	30	0	60.68	0.106	+			35381	SAPVGAQL	8	29	371.70829767949897	NaN	0	371.7083435058594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SAPVGAQL_	ENSG00000164078|ENST00000296474|MST1R;MST1R|p.G755Vfs*19|3|0.19|ENSG00000164078|chr3:49896810-49896810|C/-|frameshift_variant;MST1R|p.S761Pfs*11|1|0.43|ENSG00000164078|chr3:49896794-49896800|ACCAGGT/-|frameshift_variant;nc|ENSG00000164078|Q04912-2|MST1R;nc|ENSG00000164078|Q04912-3|MST1R;nc|ENSG00000164078|Q04912-4|MST1R;nc|ENSG00000164078|Q04912-5|MST1R;nc|ENSG00000164078|Q04912-6|MST1R;nc|ENSG00000164078|Q04912-7|MST1R	40.5726180659479	1.7418937515398478	4				NaN	NaN	0	NaN	8550	3360	11906
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11913	31.562	NaN	1075.1	30	0	565.89	0.037	+			6638	AYTPFHAVLK	10	40	573.8184667087879	1145.6223804843758	2	573.8195190429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AYTPFHAVLK_	ENSG00000138614|ENST00000313182|INTS14;nc|ENSG00000138614|Q96SY0-3|INTS14;nc|ENSG00000138614|Q96SY0-4|INTS14	26.063383197487333	0.6669871633831898	4				NaN	NaN	0	NaN	8551	3360	11906
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11931	31.599	NaN	12385	30	0	7572.7	0.214			+	24308	LFGTRNTL	8	47	461.26103915840906	920.5075253836181	2	461.26104736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LFGTRNTL_	REV__ENSG00000203985|ENST00000371360|LDLRAD1;REV__nc|ENSG00000203985|Q5T700-2|LDLRAD1;REV__nc|ENSG00000203985|Q5T700-4|LDLRAD1	68.78682469695295	0.41700713582915416	4				NaN	NaN	0	NaN	8566	3363	11930
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11932	31.603	NaN	12152	30	0	3171.7	0.106			+	14436	GTATLYKLS	9	67	477.2684780127211	952.5224030922423	2	477.26837158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTATLYKLS_	REV__ENST00000507036.1_1_5:7867877-7868021:-|nuORF	75.04331003522576	0.118981335847003	4				NaN	NaN	0	NaN	8567	3363	11930
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11933	31.605	NaN	2340.6	30	0	903.06	0.106	+			37603	SLPPVAGSLE	10	47	485.26617342467176	968.5177939161435	2	485.2659912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLPPVAGSLE_	ENST00000514480.1_2_4:76439745-76440060:+|nuORF	39.252832667884924	0.5560298534376815	4				NaN	NaN	0	NaN	8568	3363	11930
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11934	31.606	NaN	7100.9	30	0	1900.5	0.106	+			39105	SSSVVVLAGL	10	60	466.27638047345306	930.5382080137061	2	466.27606201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSSVVVLAGL_	ENST00000585357.1_1_19:38782298-38782643:+|nuORF	53.351449002276354	0.42630798468005626	4				NaN	NaN	0	NaN	8569	3363	11930
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11935	31.608	NaN	1561.5	30	0	250.49	0.106	+			41885	SVTPDTPATM	10	54	510.23955463384266	1018.4645563344853	2	510.23944091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVTPDTPATM_	CMYA5|p.F390L|1|0.29|ENSG00000164309|chr5:79729933-79729933|T/C|missense_variant;CMYA5|p.I3735Hfs*2|1|0.08|ENSG00000164309|chr5:79758842-79758843|-/T|frameshift_variant;CMYA5|p.K1823Rfs*17|2|0.34|ENSG00000164309|chr5:79734227-79734227|A/-|frameshift_variant;CMYA5|p.M1226Wfs*13|1|0.22|ENSG00000164309|chr5:79732436-79732436|A/-|frameshift_variant;CMYA5|p.N2399Ifs*16|1|0.46|ENSG00000164309|chr5:79735957-79735957|A/-|frameshift_variant;CMYA5|p.P4051Nfs*8|1|0.05|ENSG00000164309|chr5:79799555-79799561|AACCTGG/-|frameshift_variant;CMYA5|p.S3683Pfs*17|1|0.14|ENSG00000164309|chr5:79752728-79752728|T/-|frameshift_variant;ENSG00000164309|ENST00000446378|CMYA5	42.396135135203025	0.5270658956260207	4				NaN	NaN	0	NaN	8570	3363	11930
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11936	31.61	NaN	1605.3	30	0	556.25	0.106			+	50857	YEVNLTKGA	9	49	497.7643129295041	NaN	0	497.76385498046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YEVNLTKGA_	REV__tr|U7SWR2|U7SWR2_FUSNUAutotransporterdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00953PE=4SV=1	34.172542307311794	0.30503706118289736	4				NaN	NaN	0	NaN	8571	3363	11930
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11937	31.612	NaN	1322.8	30	0	96.251	0.036	+			21283	KLQKNFLTQ	9	60	560.3297708985855	1118.6449888639709	2	560.3302612304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KLQKNFLTQ_	ENSG00000203942|ENST00000370640|C10orf62	47.95952297671804	0.32689736945648856	4				NaN	NaN	0	NaN	8572	3363	11930
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11955	31.647	NaN	3239.4	30	0	780.92	0.214			+	18116	ILDKENLK	8	61	486.7897439268529	971.5649349205058	2	486.78936767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ILDKENLK_	REV__tr|U7T133|U7T133_FUSNUAAA-ATPase-likedomain-containingprotein(Fragment)OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00786PE=4SV=1	94.00642277110589	0.2653416297186628	4				NaN	NaN	0	NaN	8587	3366	11954
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11956	31.651	NaN	2501.1	30	0	895.38	0.106				-1	 	0	34	350.20663382964136	698.3987147260827	2	350.2065734863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8588	3366	11954
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11957	31.653	NaN	2737.3	30	0	596.31	0.106	+			18897	IVLNTKIL	8	54	457.3074877135444	912.6004224938888	2	457.30731201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IVLNTKIL_	ENST00000368346.7_1_1:155305486-155305633:-|nuORF	47.91560031466742	0.6071945918984287	4				NaN	NaN	0	NaN	8589	3366	11954
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11958	31.655	NaN	1514.4	30	0	188.35	0.106	+			28761	NPDSDKIIY	9	55	532.7660442249893	1063.5175355167785	2	532.7666625976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NPDSDKIIY_	ENSG00000088256|ENST00000078429|GNA11;ENSG00000156052|ENST00000286548|GNAQ;ENST00000586180.1_1_19:3118803-3121174:+|nuORF;ENST00000590534.1_1_19:3119101-3121174:+|nuORF	75.04331003522576	0.118981335847003	4				NaN	NaN	0	NaN	8590	3366	11954
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11959	31.657	NaN	8059.1	30	0	1175	0.106	+			45478	TYDKGYQF	8	66	511.2348810066008	1020.4552090800016	2	511.234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TYDKGYQF_	ENSG00000139197|ENST00000675855|PEX5;nc|ENSG00000139197|P50542-2|PEX5;nc|ENSG00000139197|P50542-3|PEX5;nc|ENSG00000139197|P50542-4|PEX5	71.87747018426188	0.391254423828572	4				NaN	NaN	0	NaN	8591	3366	11954
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11960	31.658	NaN	1261.4	30	0	94.493	0.034	+			17282	IAAPNMKAM	9	52	473.74571189094326	945.4768708486865	2	473.74603271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IAAPNMKAM_	ENSG00000072501|ENST00000322213|SMC1A	52.29916861842294	0.2778091507991977	4				NaN	NaN	0	NaN	8592	3366	11954
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11978	31.695	NaN	13284	30	0	3017.7	0.214	+			18813	ITVGDIGPK	9	67	450.2632610168081	898.5119691004162	2	450.2630920410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ITVGDIGPK_	ACOX1|p.N501Tfs*6|1|0.47|ENSG00000161533|chr17:75949577-75949577|T/-|frameshift_variant;ENSG00000161533|ENST00000293217|ACOX1;nc|ENSG00000161533|Q15067-3|ACOX1;nc|ENSG00000161533|Q15067|ACOX1	136.26810882979174	0.012230845423532208	4				NaN	NaN	0	NaN	8607	3369	11977
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11979	31.699	NaN	4517.2	30	0	1054.4	0.106	+			25540	LPVAKDVSY	9	65	496.27649689874465	990.5384408642893	2	496.2764892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LPVAKDVSY_	ENSG00000169764|ENST00000337130|UGP2;ENST00000475550.5_1_2:64069329-64114799:+|nuORF;nc|ENSG00000169764|Q16851-2|UGP2;UGP2|p.N469Kfs*16|1|0.3|ENSG00000169764|chr2:63890166-63890167|-/A|frameshift_variant;UGP2|p.N469Mfs*4|1|0.39|ENSG00000169764|chr2:63890167-63890167|A/-|frameshift_variant	101.60071028292904	0.0375685401170269	4				NaN	NaN	0	NaN	8608	3369	11977
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11980	31.701	NaN	3321.5	30	0	991.99	0.106	+			14833	GTLKTPPK	8	46	421.26066572976	840.50677852632	2	421.26055908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTLKTPPK_	nc|ENSG00000178177|Q8N3X6-2|LCORL;nc|ENSG00000178177|Q8N3X6|LCORL	58.78195531508484	0.5138399468736706	4				NaN	NaN	0	NaN	8609	3369	11977
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11981	31.702	NaN	4296.5	30	0	892.39	0.106			+	-1	YIFPKGCQK	9	53	380.8682858702726	NaN	0	380.8682556152344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_YIFPKGC(Carbamidomethyl (C))QK_	REV__ENST00000430298.6_1_19:12222347-12224207:+|nuORF	37.81151784470057	0.28666463014928195	4				NaN	NaN	0	NaN	8610	3369	11977
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11982	31.704	NaN	3327	30	0	1901	0.106				-1	SIMCLILLL	9	33	364.5448644939555	1090.6127640820666	3	364.5450134277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C),Oxidation (M)	_SIM(Oxidation (M))C(Carbamidomethyl (C))LILLL_	ENST00000472149.1_1_3:197475113-197475194:-|nuORF	20.94693142431847	0.6074874384046576	4				NaN	NaN	0	NaN	8611	3369	11977
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11983	31.706	NaN	1057.9	30	0	87.681	0.035	+			18531	ISLKEIQVL	9	48	521.8288608885323	1041.6431688438645	2	521.8296508789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ISLKEIQVL_	nc|ENSG00000078699|O43439|CBFA2T2	71.87747018426188	0.13267044672804276	4				NaN	NaN	0	NaN	8612	3369	11977
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11984	31.707	NaN	712.42	30	0	79.509	0.141				-1	EHARLFMY	8	38	541.7585943916193	NaN	0	541.7579956054688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_EHARLFM(Oxidation (M))Y_	ENSG00000069956|ENST00000261845|MAPK6;MAPK6|p.P206*|1|0.03|ENSG00000069956|chr15:52050053-52050054|CC/-|frameshift_variant	37.028477286268924	1.7418937515398478	4				NaN	NaN	0	NaN	8613	3369	11977
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12002	31.746	NaN	4783	30	0	1064.5	0.214	+			25859	LSFDRILKK	9	42	373.90093811230395	1118.6809849371118	3	373.9009704589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSFDRILKK_	ENSG00000162434|ENST00000342505|JAK1;JAK1|p.K860Nfs*16|3|0.29|ENSG00000162434|chr1:64841314-64841314|T/-|frameshift_variant	24.519189625965996	0.574102787014149	4				NaN	NaN	0	NaN	8628	3372	12001
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12003	31.749	NaN	1768.7	30	0	173.97	0.106	+			7289	DAQKAYIM	8	54	470.2335134283513	938.4524739235026	2	470.2333679199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DAQKAYIM_	ENSG00000128578|ENST00000249344|STRIP2;nc|ENSG00000128578|Q9ULQ0-2|STRIP2;STRIP2|p.Y154Ifs*25|1|0.03|ENSG00000128578|chr7:129453276-129453277|-/ATCT|frameshift_variant	58.78195531508484	0.5138399468736706	4				NaN	NaN	0	NaN	8629	3372	12001
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12004	31.751	NaN	3097.2	30	0	525.41	0.106	+			41953	SVVTLEVAK	9	60	473.2836664177807	NaN	0	473.2834777832031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVVTLEVAK_	ENSG00000130396|ENST00000683244|AFDN;nc|ENSG00000130396|P55196-1|AFDN;nc|ENSG00000130396|P55196-2|AFDN;nc|ENSG00000130396|P55196-3|AFDN;nc|ENSG00000130396|P55196-5|AFDN;nc|ENSG00000130396|P55196-6|AFDN;nc|ENSG00000130396|P55196|AFDN	37.81151784470057	0.28666463014928195	4				NaN	NaN	0	NaN	8630	3372	12001
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12005	31.753	NaN	1625.9	30	0	183.9	0.106	+			27561	MPEPDAQRF	9	58	545.7525996220639	1089.4906463109278	2	545.7529907226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MPEPDAQRF_	CHEK1|p.I234Nfs*11|1|0.24|ENSG00000149554|chr11:125635508-125635509|-/A|frameshift_variant;ENSG00000149554|ENST00000438015|CHEK1;nc|ENSG00000149554|O14757-2|CHEK1;nc|ENSG00000149554|O14757-3|CHEK1	56.43379154798735	0.2433427591689151	4				NaN	NaN	0	NaN	8631	3372	12001
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12006	31.755	NaN	2109.7	30	0	433.14	0.035	+			27759	MQYALAVSK	9	53	505.76993399581767	1009.5253150584354	2	505.76983642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MQYALAVSK_	ENSG00000241945|ENST00000291576|PWP2	88.17693792209575	0.07000514020414955	4				NaN	NaN	0	NaN	8632	3372	12001
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12023	31.79	NaN	8148.3	30	0	2494.7	0.214	+			50039	WEEAAHDL	8	70	485.7168081479017	969.4190633626034	2	485.71649169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WEEAAHDL_	ENSG00000100380|ENST00000216218|ST13;nc|ENSG00000212789|Q8NFI4|ST13P5;nc|ENSG00000232150|Q8IZP2|ST13P4;ST13|p.G306Efs*50|1|0.18|ENSG00000100380|chr22:40827160-40827160|C/-|frameshift_variant	87.75429964447693	0.2842685068779738	4				NaN	NaN	0	NaN	8646	3375	12022
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12024	31.794	NaN	14441	30	0	8310.1	0.106	+			194	AALDWVTKK	9	50	344.5340887836622	1030.5804369511866	3	344.5342712402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AALDWVTKK_	ENSG00000227057|ENST00000374617|WDR46;ENST00000488944.5_1_6:33255341-33255794:-|nuORF	39.252832667884924	0.4290233611298554	4				NaN	NaN	0	NaN	8647	3375	12022
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12025	31.796	NaN	2349.1	30	0	325.32	0.106	+			22875	KVLETFLAK	9	66	524.8239448977565	1047.633336862313	2	524.8239135742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KVLETFLAK_	ENSG00000121060|ENST00000316881|TRIM25;ENST00000572021.5_1_17:54969063-54989474:-|nuORF	56.43379154798735	0.2433427591689151	4				NaN	NaN	0	NaN	8648	3375	12022
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12026	31.798	NaN	998.48	30	0	389.61	0.106	+			31855	QPVDEIRNY	9	42	567.282411778229	1132.5502706232578	2	567.2826538085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QPVDEIRNY_	ANO9|p.D688Ifs*44|1|0.15|ENSG00000185101|chr11:418789-418789|G/-|frameshift_variant;ENSG00000185101|ENST00000332826|ANO9;ENST00000528927.5_1_11:418373-431830:-|nuORF;ENST00000532094.5_1_11:420655-431830:-|nuORF	47.657333605630114	0.33044192980041115	4				NaN	NaN	0	NaN	8649	3375	12022
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12027	31.799	NaN	1063.6	30	0	322.86	0.035			+	29597	PFRGRASGPG	10	47	501.26665671065496	1000.5187604881099	2	501.2664489746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PFRGRASGPG_	REV__ENSG00000272333|ENST00000420124|KMT2B;REV__KMT2B|p.A1049Gfs*39|1|0.32|ENSG00000272333|chr19:35723812-35723813|-/G|frameshift_variant;REV__KMT2B|p.A2538Pfs*76|1|0.42|ENSG00000272333|chr19:35737693-35737693|G/-|frameshift_variant;REV__KMT2B|p.D1589Gfs*89|1|0.28|ENSG00000272333|chr19:35729058-35729059|-/G|frameshift_variant;REV__KMT2B|p.G1199Afs*156|1|0.16|ENSG00000272333|chr19:35725283-35725283|G/-|frameshift_variant;REV__KMT2B|p.G1879Vfs*16|5|0.4|ENSG00000272333|chr19:35732101-35732101|G/-|frameshift_variant;REV__KMT2B|p.G2123Vfs*30|1|0.34|ENSG00000272333|chr19:35732913-35732913|G/-|frameshift_variant;REV__KMT2B|p.G934Efs*52|1|0.1|ENSG00000272333|chr19:35723069-35723069|G/-|frameshift_variant;REV__KMT2B|p.K553Qfs*46|1|0.45|ENSG00000272333|chr19:35720996-35720997|-/C|frameshift_variant;REV__KMT2B|p.L2136Pfs*17|1|0.27|ENSG00000272333|chr19:35732956-35732956|T/-|frameshift_variant;REV__KMT2B|p.P1201Rfs*154|1|0.37|ENSG00000272333|chr19:35725288-35725288|C/-|frameshift_variant;REV__KMT2B|p.P174Qfs*20|1|0.38|ENSG00000272333|chr19:35719862-35719862|C/-|frameshift_variant;REV__KMT2B|p.P1821Hfs*74|1|0.36|ENSG00000272333|chr19:35731927-35731927|C/-|frameshift_variant;REV__KMT2B|p.R1055Gfs*127|1|0.46|ENSG00000272333|chr19:35723827-35723827|G/-|frameshift_variant;REV__KMT2B|p.R1911Dfs*23|1|0.18|ENSG00000272333|chr19:35732274-35732274|C/-|frameshift_variant	25.57405402267927	0.6709832231498071	4				NaN	NaN	0	NaN	8650	3375	12022
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12045	31.837	NaN	3480.5	30	0	1468.5	0.214	+			36712	SGSTIAILK	9	62	445.27111564383085	888.5276783544617	2	445.27099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SGSTIAILK_	ENSG00000070019|ENST00000261170|GUCY2C;GUCY2C|p.L1022Sfs*34|1|0.04|ENSG00000070019|chr12:14613274-14613275|-/GCTG|frameshift_variant;GUCY2C|p.R974I|1|0.31|ENSG00000070019|chr12:14616682-14616682|C/A|missense_variant	58.22992032128504	0.22837015374068087	4				NaN	NaN	0	NaN	8665	3378	12044
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12046	31.841	NaN	1516.8	30	0	350.31	0.106	+			46549	VFHDQLHTF	9	40	572.2829526835433	1142.5513524338864	2	572.2833251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VFHDQLHTF_	ENSG00000100784|ENST00000614987|RPS6KA5;nc|ENSG00000100784|O75582-2|RPS6KA5;nc|ENSG00000100784|O75582-3|RPS6KA5	67.49366992349736	0.1516260258713357	4				NaN	NaN	0	NaN	8666	3378	12044
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12047	31.843	NaN	1183.3	30	0	93.126	0.106	+			21491	KNKSAPKV	8	51	436.271275111232	870.527997289264	2	436.2659606933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KNKSAPKV_	ENSG00000163092|ENST00000409195|XIRP2;nc|ENSG00000163092|A4UGR9-2|XIRP2;nc|ENSG00000163092|A4UGR9-3|XIRP2;nc|ENSG00000163092|A4UGR9|XIRP2	37.15910966729921	0.6739408393984688	4				NaN	NaN	0	NaN	8667	3378	12044
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12048	31.844	NaN	1521	30	0	267.09	0.106			+	49008	VVGPPAVVPA	10	55	453.27583724197774	NaN	0	453.2758483886719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVGPPAVVPA_	REV__EIF2B5|p.L605Pfs*9|1|0.26|ENSG00000145191|chr3:184143504-184143505|-/C|frameshift_variant;REV__ENSG00000145191|ENST00000648915|EIF2B5;REV__ENST00000481054.5_1_3:183853173-183856676:+|nuORF;REV__ENST00000491144.5_1_3:183853173-183855624:+|nuORF	44.53106598305862	0.34017787621393314	4				NaN	NaN	0	NaN	8668	3378	12044
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12049	31.846	NaN	1284.8	30	0	154.97	0.106			+	8059	DVGGRSGAEP	10	55	472.7269187792101	943.4392846252202	2	472.72772216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DVGGRSGAEP_	REV__ENSG00000255690|ENST00000539664|TRIL;REV__TRIL|p.G796Afs*4|1|0.12|ENSG00000255690|chr7:28955660-28955660|C/-|frameshift_variant	32.81241826257853	0.6118718159329168	4				NaN	NaN	0	NaN	8669	3378	12044
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12050	31.848	NaN	1156	30	0	311.33	0.035	+			19992	KEIEGIFHA	9	54	522.2800627436075	1042.5455725540148	2	522.2794799804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KEIEGIFHA_	ENSG00000155380|ENST00000369626|SLC16A1;nc|ENSG00000155380|P53985-2|SLC16A1;SLC16A1|p.F275Lfs*37|1|0.39|ENSG00000155380|chr1:112917581-112917581|A/-|frameshift_variant	35.61828744233558	0.47037581924408073	4				NaN	NaN	0	NaN	8670	3378	12044
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12051	31.849	NaN	1178	30	0	109.54	0.139	+			41233	SVLFLPML	8	50	460.271351908523	NaN	0	460.27105712890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVLFLPML_	ENST00000488457.1_1_2:25600201-25602432:-|nuORF	52.29916861842294	1.7418937515398478	4				NaN	NaN	0	NaN	8671	3378	12044
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12069	31.888	NaN	49669	30	0	5666.2	0.215	+			40653	SVAQVVLSR	9	87	479.7874417383823	957.5603305435646	2	479.7872619628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVAQVVLSR_	ENSG00000165272|ENST00000297991|AQP3;ENST00000463983.5_1_9:33443205-33447528:-|nuORF;ENST00000493581.1_1_9:33443725-33447528:-|nuORF;nc|ENSG00000165272|Q92482-2|AQP3	169.6522961985778	0.0028262690464207238	4				NaN	NaN	0	NaN	8686	3381	12068
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12070	31.891	NaN	5949.2	30	0	1597.1	0.106	+			48962	VVGAVVFQK	9	65	473.7888693058837	945.5631856785674	2	473.78924560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVGAVVFQK_	ENSG00000169223|ENST00000303127|LMAN2;ENST00000504071.1_1_5:176759089-176761465:-|nuORF;ENST00000515209.5_1_5:176759089-176761331:-|nuORF	143.01937276914788	0.00906355689373299	4				NaN	NaN	0	NaN	8687	3381	12068
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12071	31.893	NaN	6815.5	30	0	1635	0.106	+			2247	ALTLSTVKY	9	60	498.2921485233189	994.5697441134378	2	498.29217529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ALTLSTVKY_	ENSG00000110076|ENST00000265459|NRXN2;ENST00000466324.1_1_11:64444212-64481216:-|nuORF;nc|ENSG00000110076|Q9P2S2-2|NRXN2;NRXN2|p.T1508Rfs*58|2|0.16|ENSG00000110076|chr11:64607814-64607814|G/-|frameshift_variant	79.71258880314673	0.09879134589249085	4				NaN	NaN	0	NaN	8688	3381	12068
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12072	31.895	NaN	3434.7	30	0	547.69	0.106	+			5932	AVLHTVLLH	9	62	501.8084580382168	1001.6023631432337	2	501.8085021972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVLHTVLLH_	ENSG00000123395|ENST00000336854|ATG101	128.81572412613596	0.015862941183890658	4				NaN	NaN	0	NaN	8689	3381	12068
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12073	31.897	NaN	1091.1	30	0	97.2	0.106			+	44769	TTPIGQQL	8	43	429.240094418184	856.465635903168	2	429.2398986816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TTPIGQQL_	REV__EPHB3|p.L956Pfs*228|1|0.32|ENSG00000182580|chr3:184581384-184581385|-/C|frameshift_variant	47.91560031466742	0.6071945918984287	4				NaN	NaN	0	NaN	8690	3381	12068
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12074	31.899	NaN	807.69	30	0	82.532	0.037	+			32307	QTQIDAVCCR	10	46	568.7646520372222	1135.5147511412442	2	568.7652587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QTQIDAVCCR_	ENSG00000129493|ENST00000543095|HEATR5A;ENST00000549185.5_3_14:31803609-31872202:-|nuORF;HEATR5A|p.A970Vfs*19|1|0.07|ENSG00000129493|chr14:31345236-31345237|-/AGCTA|frameshift_variant;HEATR5A|p.R359C|1|0.46|ENSG00000129493|chr14:31387234-31387234|G/A|missense_variant;nc|ENSG00000129493|Q86XA9-2|HEATR5A;nc|ENSG00000129493|Q86XA9|HEATR5A	64.20726635412375	0.3275756395432415	4				NaN	NaN	0	NaN	8691	3381	12068
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12075	31.9	NaN	461.75	30	0	391.69	0.138	+			45888	VAPGGVSG	8	6	322.1753739968848	NaN	0	322.1752624511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VAPGGVSG_	ENSG00000104973|ENST00000312865|MED25;ENST00000599722.1_1_19:50334108-50335279:+|nuORF;nc|ENSG00000104973|Q71SY5-4|MED25;nc|ENSG00000104973|Q71SY5-5|MED25;nc|ENSG00000104973|Q71SY5-6|MED25	4.6817480819748125	1.7418937515398478	4				NaN	NaN	0	NaN	8692	3381	12068
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12093	31.939	NaN	2932.1	30	0	362.87	0.214	+			31038	QEVGQVSV	8	54	423.2217964342775	844.429039935355	2	423.2217102050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QEVGQVSV_	ENSG00000138448|ENST00000261023|ITGAV;ITGAV|p.G401Efs*13|1|0.4|ENSG00000138448|chr2:186646721-186646721|A/-|frameshift_variant;ITGAV|p.G561Dfs*2|4|0.23|ENSG00000138448|chr2:186656358-186656358|G/-|frameshift_variant;ITGAV|p.V806Hfs*11|1|0.07|ENSG00000138448|chr2:186667758-186667759|-/CATTTTCAAAA|frameshift_variant;nc|ENSG00000138448|P06756-2|ITGAV;nc|ENSG00000138448|P06756-3|ITGAV	76.7741389293348	0.3504530765139327	4				NaN	NaN	0	NaN	8707	3384	12092
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12094	31.942	NaN	3507.6	30	0	842.35	0.106	+			47486	VQEDQRDLIFK	11	60	464.24882676835756	1389.7246509052727	3	464.2486877441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VQEDQRDLIFK_	ENSG00000083750|ENST00000374941|RRAGB;ENSG00000155876|ENST00000380527|RRAGA;ENST00000474757.1_1_X:55757854-55777647:+|nuORF;nc|ENSG00000083750|Q5VZM2|RRAGB	70.41160668669231	0.23230827815249774	4				NaN	NaN	0	NaN	8708	3384	12092
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12095	31.944	NaN	1151.6	30	0	179.39	0.106	+			11079	FETKITQV	8	50	483.2683673009236	NaN	0	483.26824951171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FETKITQV_	ENSG00000224389|ENST00000435363|C4B;ENSG00000244731|ENST00000428956|C4A;ENST00000468237.5_1_6:32001530-32003051:+|nuORF;ENST00000468936.5_1_6:31999682-32002424:+|nuORF;nc|ENSG00000244731|P0C0L4-2|C4A	42.86426827375447	1.7418937515398478	4				NaN	NaN	0	NaN	8709	3384	12092
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12096	31.946	NaN	1556.5	30	0	142.51	0.106	+			28988	NSLPAEWCE	9	64	524.723734607142	1047.4329162810839	2	524.72412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NSLPAEWCE_	ENSG00000109686|ENST00000604030|SH3D19;ENST00000478503.6_1_4:152043245-152086876:-|nuORF;LRBA-SH3D19|1|fusion;LRBA-SH3D19|2|fusion;LRBA-SH3D19|3|fusion;LRBA-SH3D19|4|fusion;nc|ENSG00000109686|Q5HYK7-2|SH3D19;nc|ENSG00000109686|Q5HYK7-3|SH3D19;nc|ENSG00000109686|Q5HYK7-4|SH3D19;nc|ENSG00000109686|Q5HYK7-5|SH3D19;nc|ENSG00000109686|Q5HYK7|SH3D19	21.9598887501803	0.5980208138527809	4				NaN	NaN	0	NaN	8710	3384	12092
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12097	31.948	NaN	1537.5	30	0	628.1	0.106			+	-1	TGAIISCLVKH	11	29	400.22479248046875	NaN	0	400.22479248046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_TGAIISC(Carbamidomethyl (C))LVKH_	REV__ADGRE2|p.I749Rfs*49|1|0.1|ENSG00000127507|chr19:14743716-14743722|TGCAAGA/-|frameshift_variant;REV__ENSG00000127507|ENST00000315576|ADGRE2;REV__nc|ENSG00000127507|Q9UHX3-2|ADGRE2;REV__nc|ENSG00000127507|Q9UHX3-3|ADGRE2;REV__nc|ENSG00000127507|Q9UHX3-4|ADGRE2;REV__nc|ENSG00000127507|Q9UHX3-5|ADGRE2;REV__nc|ENSG00000127507|Q9UHX3-6|ADGRE2	18.531049691330335	0.456735970842152	4				NaN	NaN	0	NaN	8711	3384	12092
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12098	31.95	NaN	1489	30	0	283.98	0.106			+	-1	VMVKGSLVS	9	54	468.26357950976626	934.5126060863325	2	468.2637023925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_VM(Oxidation (M))VKGSLVS_	REV__ENSG00000138688|ENST00000679879|BLTP1;REV__KIAA1109-FSIP2|1|fusion;REV__nc|ENSG00000138688|Q2LD37-2|BLTP1;REV__nc|ENSG00000138688|Q2LD37-4|BLTP1;REV__nc|ENSG00000138688|Q2LD37-5|BLTP1;REV__nc|ENSG00000138688|Q2LD37-6|BLTP1;REV__nc|ENSG00000138688|Q2LD37-7|BLTP1;REV__nc|ENSG00000138688|Q2LD37|BLTP1	51.33545320467046	0.2872990594074956	4				NaN	NaN	0	NaN	8712	3384	12092
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12099	31.951	NaN	1747.2	30	0	385.98	0.037	+			32952	REDDPVRML	9	51	565.7847009989765	1129.554849064753	2	565.7853393554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_REDDPVRML_	ENSG00000005700|ENST00000306270|IBTK;ENST00000369751.2_1_6:82901346-82950269:-|nuORF;IBTK|p.K1213Sfs*50|1|0.13|ENSG00000005700|chr6:82181966-82181966|T/-|frameshift_variant;IBTK|p.M1160*|1|0.13|ENSG00000005700|chr6:82191170-82191170|T/-|frameshift_variant;nc|ENSG00000005700|Q9P2D0-2|IBTK	27.047317107675042	0.5504760921104335	4				NaN	NaN	0	NaN	8713	3384	12092
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12116	31.987	NaN	10118	30	0	4973.3	0.214			+	-1	RSQYEQDGM	9	60	586.2375804106035	1170.460607888007	2	586.239013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))RSQYEQDGM(Oxidation (M))_	REV__ENSG00000101115|ENST00000217086|SALL4;REV__SALL4|p.S765A|1|0.34|ENSG00000101115|chr20:51790190-51790190|A/C|missense_variant	29.14955571784316	0.5308295550522326	4				NaN	NaN	0	NaN	8727	3387	12115
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12117	31.99	NaN	2785.7	30	0	230.86	0.106	+			24657	LGTSALRFH	9	53	501.27981677055726	1000.5450806079145	2	501.2802429199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LGTSALRFH_	ENST00000398810.6_1_7:50659566-50659797:-|nuORF	47.91560031466742	0.327412564698279	4				NaN	NaN	0	NaN	8728	3387	12115
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12118	31.992	NaN	960.87	30	0	260.05	0.106	+			48997	VVGLPNVGK	9	37	441.77409513155095	881.5336373299019	2	441.7737121582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVGLPNVGK_	ENSG00000130119|ENST00000360845|GNL3L	45.9519527083369	0.35044536499095585	4				NaN	NaN	0	NaN	8729	3387	12115
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12119	31.994	NaN	1519.1	30	0	288.71	0.035	+			2593	AQGEPKVYN	9	62	503.25401336312103	1004.4934737930421	2	504.2618408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AQGEPKVYN_	ENSG00000125454|ENST00000416858|SLC25A19;SLC25A19|p.T164Pfs*19|1|0.3|ENSG00000125454|chr17:75278306-75278306|C/-|frameshift_variant	31.529811441608018	0.5085848003137583	4				NaN	NaN	0	NaN	8730	3387	12115
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12134	32.026	NaN	4936.7	30	0	1176.7	0.214	+			40630	SVANPAFLK	9	66	473.77145168985976	NaN	0	473.7711486816406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVANPAFLK_	ENSG00000108559|ENST00000573584|NUP88;ENST00000574867.5_1_17:5292093-5322970:-|nuORF;ENST00000576862.5_1_17:5290923-5298221:-|nuORF	69.6276240434122	0.10825701912424071	4				NaN	NaN	0	NaN	8742	3390	12133
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12135	32.029	NaN	3009.7	30	0	319.65	0.106	+			45479	TYDKGYQF	8	65	511.2348810066008	1020.4552090800016	2	511.2353210449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TYDKGYQF_	ENSG00000139197|ENST00000675855|PEX5;nc|ENSG00000139197|P50542-2|PEX5;nc|ENSG00000139197|P50542-3|PEX5;nc|ENSG00000139197|P50542-4|PEX5	99.37495909608758	0.2510236104623939	4				NaN	NaN	0	NaN	8743	3390	12133
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12136	32.031	NaN	4473.1	30	0	1057	0.106	+			38141	SQAEALLMK	9	67	495.7676452304159	989.5207375276318	2	495.7676086425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SQAEALLMK_	ENSG00000169519|ENST00000407364|METTL15;nc|ENSG00000169519|A6NJ78-2|METTL15;nc|ENSG00000169519|A6NJ78-4|METTL15;nc|ENSG00000174912|P0C7V9|METTL15P1	117.5257442709337	0.022697614825424036	4				NaN	NaN	0	NaN	8744	3390	12133
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12137	32.033	NaN	2893.5	30	0	179.86	0.106			+	47688	VSEASPLRM	9	61	503.25401336312103	1004.4934737930421	2	503.2538146972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_VSEASPLRM(Oxidation (M))_	REV__ENSG00000186648|ENST00000342740|CARMIL3	45.97224482568171	0.3502073465782774	4				NaN	NaN	0	NaN	8745	3390	12133
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12138	32.035	NaN	2923.8	30	0	275.15	0.106	+			18570	ISNWTVSY	8	66	485.2363469981628	968.4581410631256	2	485.2351379394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ISNWTVSY_	ENSG00000137216|ENST00000323267|TMEM63B;ENST00000534326.5_1_6:44102273-44116742:+|nuORF;nc|ENSG00000137216|Q5T3F8-2|TMEM63B;nc|ENSG00000137216|Q5T3F8-3|TMEM63B	79.45101966838831	0.3281480470254892	4				NaN	NaN	0	NaN	8746	3390	12133
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12139	32.037	NaN	17531	30	0	10861	0.038	+			49753	VYPEKLATKF	10	49	399.2287524248259	1194.6644278746778	3	399.2286071777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VYPEKLATKF_	ENSG00000136813|ENST00000684092|ECPAS;nc|ENSG00000136813|Q5VYK3|ECPAS	25.125986553469783	0.6746423231557295	4				NaN	NaN	0	NaN	8747	3390	12133
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12140	32.037	NaN	641.92	30	0	77.038	0.141				-1	KRKPTTCML	9	39	547.2949829101562	NaN	0	547.2949829101562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_KRKPTTCM(Oxidation (M))L_	ENSG00000116731|ENST00000311066|PRDM2;nc|ENSG00000116731|Q13029-2|PRDM2;nc|ENSG00000116731|Q13029-3|PRDM2;nc|ENSG00000116731|Q13029-5|PRDM2;PRDM2|p.G1390Efs*14|1|0.21|ENSG00000116731|chr1:13781963-13781964|GG/-|frameshift_variant;PRDM2|p.N1426Ifs*3|1|0.17|ENSG00000116731|chr1:13782065-13782065|A/-|frameshift_variant;PRDM2|p.P1648Qfs*14|1|0.24|ENSG00000116731|chr1:13782731-13782731|G/-|frameshift_variant	35.61828744233558	0.29773779453147337	4				NaN	NaN	0	NaN	8748	3390	12133
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12157	32.074	NaN	11002	30	0	5992.4	0.214	+			38077	SPSSVSNTF	9	55	463.2167078956707	924.4188628581414	2	463.21630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SPSSVSNTF_	ENSG00000145113|ENST00000463781|MUC4;MUC4|p.L3985Ffs*274|1|0.3|ENSG00000145113|chr3:195779627-195779627|G/-|frameshift_variant;MUC4|p.N4902Tfs*8|1|0.37|ENSG00000145113|chr3:195761027-195761027|T/-|frameshift_variant;nc|ENSG00000145113|Q99102-10|MUC4;nc|ENSG00000145113|Q99102-11|MUC4;nc|ENSG00000145113|Q99102-15|MUC4;nc|ENSG00000145113|Q99102-16|MUC4;nc|ENSG00000145113|Q99102-17|MUC4;nc|ENSG00000145113|Q99102-2|MUC4;nc|ENSG00000145113|Q99102-3|MUC4;nc|ENSG00000145113|Q99102-5|MUC4;nc|ENSG00000145113|Q99102-7|MUC4;nc|ENSG00000145113|Q99102-8|MUC4;nc|ENSG00000145113|Q99102-9|MUC4	95.81516180277367	0.04847050768394289	4				NaN	NaN	0	NaN	8762	3393	12156
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12158	32.078	NaN	2490.6	30	0	380.4	0.106	+			22844	KVIGIAIMK	9	60	486.81690097669053	971.6192490201811	2	486.8170471191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVIGIAIMK_	ENSG00000138050|ENST00000505747|THUMPD2;ENST00000460072.5_1_2:39984490-39995716:-|nuORF;nc|ENSG00000138050|Q9BTF0-2|THUMPD2	66.42927471994793	0.16001998865088202	4				NaN	NaN	0	NaN	8763	3393	12156
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12159	32.08	NaN	3571.6	30	0	295.11	0.106	+			48147	VSWVLCPR	8	69	480.26098676814104	958.5074206030821	2	480.2611999511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSWVLCPR_	ENST00000577486.1_1_17:38228403-38233770:+|nuORF;ENST00000584985.5_1_17:38219164-38233770:+|nuORF;ENST00000585047.5_1_17:38218205-38233770:+|nuORF	47.91560031466742	0.6071945918984287	4				NaN	NaN	0	NaN	8764	3393	12156
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12160	32.081	NaN	7560.6	30	0	616.4	0.106	+			30235	PSSSWSSVA	9	69	454.2113134594009	906.4080739856018	2	454.2109680175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PSSSWSSVA_	ENSG00000162924|ENST00000394479|REL;nc|ENSG00000162924|Q04864|REL	82.30502934623384	0.08758161712619916	4				NaN	NaN	0	NaN	8765	3393	12156
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12161	32.083	NaN	3179.7	30	0	337.74	0.106	+			5292	ATVISLPAK	9	63	450.28169407437275	898.5488352155455	2	450.2814025878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATVISLPAK_	ENSG00000020256|ENST00000216923|ZFP64;ENST00000477786.5_1_20:50705508-50792496:-|nuORF;nc|ENSG00000020256|Q9NTW7-3|ZFP64;nc|ENSG00000020256|Q9NTW7-4|ZFP64;nc|ENSG00000020256|Q9NTW7|ZFP64;ZFP64|p.D633Lfs*3|1|0.04|ENSG00000020256|chr20:52152295-52152296|-/ATTCAAG|frameshift_variant	77.31757898189308	0.1091473830098891	4				NaN	NaN	0	NaN	8766	3393	12156
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12162	32.085	NaN	3380.8	30	0	1332.4	0.039	+			24658	LGTSKLQP	8	60	422.24951171875	NaN	0	422.24951171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LGTSKLQP_	nc|ENSG00000188086|Q7RTY3-2|PRSS45P;nc|ENSG00000188086|Q7RTY3|PRSS45P	60.97194046774394	1.7418937515398478	4				NaN	NaN	0	NaN	8767	3393	12156
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12163	32.086	NaN	1880.8	30	0	149.7	0.141			+	21248	KLKQLNLEQ	9	54	557.335000657892	1112.655448382584	2	557.3352661132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KLKQLNLEQ_	REV__ENSG00000165115|ENST00000297814|KIF27;REV__KIF27|p.K1223Tfs*2|1|0.11|ENSG00000165115|chr9:83842289-83842290|TT/-|frameshift_variant;REV__KIF27|p.M726Nfs*7|1|0.18|ENSG00000165115|chr9:83887103-83887104|-/T|frameshift_variant;REV__nc|ENSG00000165115|Q86VH2-2|KIF27;REV__nc|ENSG00000165115|Q86VH2-3|KIF27;REV__nc|ENSG00000165115|Q86VH2-4|KIF27	70.8162118820467	0.13725933411854815	4				NaN	NaN	0	NaN	8768	3393	12156
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12178	32.119	NaN	11203	30	0	3228.1	0.214	+			27942	MVGKTFTY	8	68	473.73852997931385	945.4625070254277	2	473.7383728027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MVGKTFTY_	CYP51A1|p.L333Wfs*13|1|0.15|ENSG00000001630|chr7:92123208-92123208|A/-|frameshift_variant;ENSG00000001630|ENST00000003100|CYP51A1;ENST00000419457.1_1_13:29297642-29297861:-|nuORF;nc|ENSG00000001630|Q16850-2|CYP51A1	110.11987700582712	0.24509564897437786	4				NaN	NaN	0	NaN	8780	3396	12177
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12179	32.123	NaN	28337	30	0	5874.2	0.106	+			14066	GSISDKFFQK	10	56	386.2047251863668	1155.5923461593004	3	386.2046813964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSISDKFFQK_	ENSG00000089472|ENST00000343002|HEPH;HEPH|p.R1086Qfs*4|1|0.29|ENSG00000089472|chrX:66266444-66266445|-/C|frameshift_variant;nc|ENSG00000089472|Q9BQS7-2|HEPH;nc|ENSG00000089472|Q9BQS7-3|HEPH;nc|ENSG00000089472|Q9BQS7-4|HEPH	85.16082228582465	0.15877915086237185	4				NaN	NaN	0	NaN	8781	3396	12177
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12180	32.125	NaN	4938.3	30	0	2104.8	0.106	+			32366	QVAEIVSKY	9	68	518.7871172685228	1035.5596816038455	2	518.7874145507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QVAEIVSKY_	ENSG00000138448|ENST00000261023|ITGAV;ITGAV|p.G401Efs*13|1|0.4|ENSG00000138448|chr2:186646721-186646721|A/-|frameshift_variant;ITGAV|p.G561Dfs*2|4|0.23|ENSG00000138448|chr2:186656358-186656358|G/-|frameshift_variant;ITGAV|p.V806Hfs*11|1|0.07|ENSG00000138448|chr2:186667758-186667759|-/CATTTTCAAAA|frameshift_variant;nc|ENSG00000138448|P06756-2|ITGAV;nc|ENSG00000138448|P06756-3|ITGAV	109.43880257439609	0.029570636687953285	4				NaN	NaN	0	NaN	8782	3396	12177
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12181	32.127	NaN	9539.7	30	0	1586	0.106			+	24829	LISYDTGRA	9	70	498.2619674804197	994.5093820276394	2	498.2608337402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LISYDTGRA_	REV__ENSG00000083857|ENST00000441802|FAT1;REV__FAT1|p.P4313Lfs*36|1|0.34|ENSG00000083857|chr4:186596602-186596602|G/-|frameshift_variant	90.77665401227738	0.06267569666681755	4				NaN	NaN	0	NaN	8783	3396	12177
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12182	32.128	NaN	3424.2	30	0	513.66	0.106			+	51053	YLGHLVKTS	9	54	509.2918497624896	NaN	0	509.2916259765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YLGHLVKTS_	REV__ENSG00000198853|ENST00000361226|RUSC2	37.15910966729921	0.2899585034171616	4				NaN	NaN	0	NaN	8784	3396	12177
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12183	32.13	NaN	1582	30	0	227.28	0.034			+	39798	STLDIKEK	8	47	467.2674039614416	932.5202549896832	2	467.2671813964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STLDIKEK_	REV__ENSG00000166750|ENST00000299977|SLFN5;REV__nc|ENSG00000166750|Q08AF3-2|SLFN5;REV__SLFN5|p.P698Lfs*21|1|0.46|ENSG00000166750|chr17:35265300-35265300|C/-|frameshift_variant;REV__SLFN5|p.Q524Sfs*11|1|0.73|ENSG00000166750|chr17:35264609-35264609|C/-|frameshift_variant	49.44154591367651	0.597725784090933	4				NaN	NaN	0	NaN	8785	3396	12177
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12184	32.131	NaN	1619.8	30	0	106.76	0.145			+	11327	FLAWCPFCCLL	11	54	439.20595494790996	1314.5960354439298	3	439.2052001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FLAWCPFCCLL_	REV__ENSG00000142494|ENST00000270570|SLC47A1;REV__ENST00000497548.5_1_17:19437252-19459239:+|nuORF;REV__ENST00000571335.5_1_17:19445708-19459199:+|nuORF;REV__nc|ENSG00000142494|Q96FL8-2|SLC47A1;REV__nc|ENSG00000142494|Q96FL8-3|SLC47A1	27.047317107675042	0.7060868989289394	4				NaN	NaN	0	NaN	8786	3396	12177
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12201	32.168	NaN	3867	30	0	475.53	0.214	+			35711	SDLKVIVM	8	58	460.75976721747	919.5049815017401	2	460.7595520019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_SDLKVIVM(Oxidation (M))_	ENSG00000109606|ENST00000336812|DHX15	87.75429964447693	0.2842685068779738	4				NaN	NaN	0	NaN	8800	3399	12200
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12202	32.171	NaN	2407.3	30	0	251.78	0.106			+	10997	FEGTTIDAY	9	53	508.7306866958738	NaN	0	508.7304382324219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FEGTTIDAY_	REV__tr|U7STA6|U7STA6_FUSNUDNAmismatchrepairproteinMutSOS=FusobacteriumnucleatumCTI-5OX=1316586GN=mutSPE=3SV=1	53.351449002276354	0.18359631779194618	4				NaN	NaN	0	NaN	8801	3399	12200
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12203	32.173	NaN	1325.7	30	0	186.78	0.106	+			47127	VLPASVQLK	9	53	477.802637374194	953.590721815188	2	477.80279541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VLPASVQLK_	ENSG00000172955|ENST00000394899|ADH6;nc|ENSG00000172955|P28332|ADH6	42.396135135203025	0.392153681582562	4				NaN	NaN	0	NaN	8802	3399	12200
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12204	32.175	NaN	575.24	30	0	276.98	0.106				-1	 	0	15	350.20663382964136	698.3987147260827	2	350.2069091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8803	3399	12200
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12205	32.177	NaN	936.55	30	0	337.93	0.106	+			16949	HPNSAIILHY	10	38	582.8121675637932	NaN	0	582.812255859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HPNSAIILHY_	CNOT1|p.Q904Sfs*9|4|0.29|ENSG00000125107|chr16:58555436-58555436|A/-|frameshift_variant;ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1;nc|ENSG00000125107|A5YKK6-4|CNOT1	51.19269402634007	0.2980620950593832	4				NaN	NaN	0	NaN	8804	3399	12200
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12206	32.179	NaN	717.1	30	0	77.218	0.106			+	-1	TISSPLMQ	8	39	446.7245064566909	891.4344599801818	2	446.7242126464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_TISSPLM(Oxidation (M))Q_	REV__ENSG00000092203|ENST00000448790|TOX4;REV__nc|ENSG00000092203|O94842-2|TOX4;REV__nc|ENSG00000092203|O94842-3|TOX4;REV__TOX4|p.Q486Hfs*16|1|0.55|ENSG00000092203|chr14:21493073-21493073|A/-|frameshift_variant;REV__TOX4|p.T456Dfs*60|1|0.38|ENSG00000092203|chr14:21492975-21492976|-/C|frameshift_variant	24.20275056022122	0.7724576178584145	4				NaN	NaN	0	NaN	8805	3399	12200
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12207	32.181	NaN	1027.2	30	0	122.59	0.035			+	8930	EEVVALAEK	9	62	494.27149650752466	986.5284400818493	2	494.2719421386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EEVVALAEK_	REV__tr|U7T299|U7T299_FUSNULargeribosomalsubunitproteinuL4OS=FusobacteriumnucleatumCTI-5OX=1316586GN=rplDPE=3SV=1	44.116797842482775	0.37197099687881774	4				NaN	NaN	0	NaN	8806	3399	12200
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12225	32.218	NaN	6069.4	30	0	1262.3	0.214	+			30284	PTIHPSQY	8	60	471.7377318437354	941.4609107542708	2	471.7377624511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PTIHPSQY_	ENSG00000064393|ENST00000406875|HIPK2;nc|ENSG00000064393|Q9H2X6-3|HIPK2	32.81241826257853	0.7059802730411993	4				NaN	NaN	0	NaN	8821	3402	12224
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12226	32.222	NaN	1933.9	30	0	184.3	0.106	+			36660	SGMDVTIVK	9	61	475.2545318938728	NaN	0	475.255126953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SGMDVTIVK_	ENSG00000006530|ENST00000649286|AGK;ENST00000465241.5_1_7:141255266-141315366:+|nuORF	46.45678178249821	0.2311111838007999	4				NaN	NaN	0	NaN	8822	3402	12224
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12227	32.224	NaN	2049.5	30	0	213.1	0.106			+	24777	LIENSLAR	8	53	458.26675727284356	914.5189616124871	2	458.266845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LIENSLAR_	REV__ENSG00000169884|ENST00000301061|WNT10B;REV__nc|ENSG00000169884|O00744-2|WNT10B	82.30502934623384	0.30436709589983096	4				NaN	NaN	0	NaN	8823	3402	12224
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12228	32.226	NaN	1832.8	30	0	646.14	0.106	+			48616	VTSEKCSL	8	46	433.7167430304864	865.4189331277728	2	433.7163391113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTSEKCSL_	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42|TTN;TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;TTN|p.I24998Nfs*2|1|0.35|ENSG00000155657|chr2:178566216-178566217|-/T|frameshift_variant;TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;TTN|p.K26626Nfs*34|1|0.34|ENSG00000155657|chr2:178561331-178561331|T/-|frameshift_variant;TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant;TTN|p.V27442Cfs*4|1|0.05|ENSG00000155657|chr2:178558107-178558108|-/A|frameshift_variant	60.29395666154354	0.49887135096048313	4				NaN	NaN	0	NaN	8824	3402	12224
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12229	32.227	NaN	5218	30	0	861.79	0.106	+			3778	ATAEVLNIGK	10	67	508.29320905342365	1014.5718651736473	2	508.29376220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATAEVLNIGK_	ENSG00000128050|ENST00000512576|PAICS;ENST00000510584.1_1_4:57302478-57308067:+|nuORF;nc|ENSG00000128050|P22234-2|PAICS	78.26377905018397	0.20980573808910843	4				NaN	NaN	0	NaN	8825	3402	12224
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12230	32.229	NaN	8195.8	30	0	2691.3	0.037				-1	SAKLSTVKTM	10	37	361.20177445534193	1080.583493966226	3	361.2016906738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_SAKLSTVKTM(Oxidation (M))_	ENSG00000102053|ENST00000338957|ZC3H12B;nc|ENSG00000102053|Q5HYM0-2|ZC3H12B;ZC3H12B|p.S479Afs*71|1|0.28|ENSG00000102053|chrX:65502124-65502124|C/-|frameshift_variant;ZC3H12B|p.V574Cfs*14|1|0.11|ENSG00000102053|chrX:65502413-65502413|G/-|frameshift_variant	21.68575002086885	0.7027366847906487	4				NaN	NaN	0	NaN	8826	3402	12224
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12231	32.23	NaN	1704.8	30	0	94.107	0.141	+			34780	RYITKGNLF	9	56	556.3172605329253	NaN	0	556.317626953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RYITKGNLF_	ENSG00000275052|ENST00000616407|PPP4R3B;ENST00000482826.1_1_2:55795287-55800821:-|nuORF;nc|ENSG00000275052|Q5MIZ7-2|PPP4R3B;nc|ENSG00000275052|Q5MIZ7-3|PPP4R3B;nc|ENSG00000275052|Q5MIZ7-5|PPP4R3B	39.252832667884924	0.27938773122138094	4				NaN	NaN	0	NaN	8827	3402	12224
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12249	32.269	NaN	3609	30	0	469.02	0.214	+			27225	MEKIQPAL	8	60	465.26011745156063	928.5056819699213	2	465.26007080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MEKIQPAL_	ENSG00000123349|ENST00000334478|PFDN5;ENST00000552341.5_1_12:53691573-53693126:+|nuORF;ENST00000553171.1_1_12:53691669-53691972:+|nuORF;nc|ENSG00000123349|Q99471-3|PFDN5	79.71258880314673	0.32596852995588826	4				NaN	NaN	0	NaN	8842	3405	12248
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12250	32.273	NaN	3108.3	30	0	654.22	0.106	+			50526	YAPSGNYV	8	49	435.70357549299257	869.3925980527852	2	435.7036437988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YAPSGNYV_	ENSG00000078369|ENST00000378609|GNB1;ENSG00000114450|ENST00000232564|GNB4;nc|ENSG00000078369|P62873-2|GNB1	79.45101966838831	0.3281480470254892	4				NaN	NaN	0	NaN	8843	3405	12248
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12251	32.275	NaN	1955.5	30	0	738.9	0.106	+			49319	VVSDSTFLAK	10	51	533.7931721109442	1065.5717912886882	2	533.7937622070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVSDSTFLAK_	ENSG00000166866|ENST00000300119|MYO1A	62.107414245175825	0.3466735403679669	4				NaN	NaN	0	NaN	8844	3405	12248
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12252	32.277	NaN	977.04	30	0	55.933	0.106	+			44062	TPSPEIVKY	9	54	517.2822511470018	1032.5499493608036	2	517.2827758789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TPSPEIVKY_	ENSG00000138035|ENST00000447944|PNPT1;ENST00000260604.8_1_2:55870335-55906871:-|nuORF	87.69643885390035	0.07135982304947239	4				NaN	NaN	0	NaN	8845	3405	12248
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12253	32.278	NaN	1353.1	30	0	173.32	0.035			+	32894	RDPPLARFA	9	52	521.79349471171	NaN	0	521.79296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RDPPLARFA_	REV__ENSG00000010327|ENST00000321725|STAB1;REV__ENST00000481626.5_1_3:52553496-52554202:+|nuORF;REV__STAB1|p.F2001Lfs*111|1|0.35|ENSG00000010327|chr3:52521452-52521452|T/-|frameshift_variant	40.77816245573522	0.2702456086868081	4				NaN	NaN	0	NaN	8846	3405	12248
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12271	32.316	NaN	3994.7	30	0	524.14	0.214	+			6935	CPCGWGPLCL	10	65	524.723734607142	1047.4329162810839	2	524.7247314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CPCGWGPLCL_	ENST00000441012.6_1_11:47279523-47282064:+|nuORF;ENST00000525441.5_1_11:47279523-47282818:+|nuORF	26.79610172149135	0.6610034878437611	4				NaN	NaN	0	NaN	8861	3408	12270
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12272	32.32	NaN	2767.1	30	0	283.81	0.106	+			27609	MPNSPAPHF	9	60	499.2313373368945	996.448121740589	2	499.2326354980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MPNSPAPHF_	ENSG00000112297|ENST00000633556|CRYBG1;nc|ENSG00000112297|Q9Y4K1-1|CRYBG1	49.536043120802724	0.308405419312776	4				NaN	NaN	0	NaN	8862	3408	12270
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12273	32.322	NaN	11916	30	0	5327.6	0.106	+			50924	YGQKDLLFK	9	52	371.20953267644524	1110.6067686295357	3	371.2096252441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YGQKDLLFK_	ENSG00000163975|ENST00000296350|MELTF;MFI2|p.V627Cfs*29|1|0.15|ENSG00000163975|chr3:197006608-197006609|-/A|frameshift_variant;MFI2|p.Y365Tfs*54|2|0.47|ENSG00000163975|chr3:197015506-197015506|G/-|frameshift_variant	62.107414245175825	0.1960472003779324	4				NaN	NaN	0	NaN	8863	3408	12270
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12274	32.323	NaN	5268.7	30	0	1266	0.106	+			28421	NETVAIHSL	9	62	492.26207819712414	982.5096034610483	2	492.26263427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NETVAIHSL_	ENSG00000082269|ENST00000418814|FAM135A;FAM135A|p.N1165Ifs*3|1|0.07|ENSG00000082269|chr6:70526577-70526578|-/T|frameshift_variant;FAM135A|p.N999Ifs*5|1|0.39|ENSG00000082269|chr6:70526073-70526073|A/-|frameshift_variant;FAM135A|p.N999Kfs*2|1|0.18|ENSG00000082269|chr6:70526072-70526073|-/A|frameshift_variant;nc|ENSG00000082269|Q9P2D6-2|FAM135A;nc|ENSG00000082269|Q9P2D6-3|FAM135A;nc|ENSG00000082269|Q9P2D6-4|FAM135A	120.8684288430529	0.02067403653475984	4				NaN	NaN	0	NaN	8864	3408	12270
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12275	32.325	NaN	5590.4	30	0	527.68	0.036	+			16312	HEIEALKSF	9	74	537.2846705792832	1072.5547882253663	2	537.28564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HEIEALKSF_	ENSG00000078618|ENST00000352171|NRDC;nc|ENSG00000078618|O43847-2|NRDC	158.07458414430337	0.004987072822166904	4				NaN	NaN	0	NaN	8865	3408	12270
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12288	32.353	NaN	13902	30	0	2757.8	0.214	+			42860	TEGKTFQL	8	73	462.2450018599218	922.4754507866436	2	462.2450866699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEGKTFQL_	ENSG00000106105|ENST00000389266|GARS1;nc|ENSG00000106105|P41250-2|GARS1	85.16082228582465	0.29211966821764696	4				NaN	NaN	0	NaN	8875	3411	12287
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12289	32.356	NaN	4365.2	30	0	1434.5	0.106	+			48998	VVGLPNVGK	9	54	441.77409513155095	881.5336373299019	2	441.7738037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVGLPNVGK_	ENSG00000130119|ENST00000360845|GNL3L	47.91560031466742	0.327412564698279	4				NaN	NaN	0	NaN	8876	3411	12287
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12290	32.358	NaN	4151.8	30	0	1278.2	0.106	+			29531	PEERPKAL	8	54	470.26626283598296	938.5179727387659	2	470.26654052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PEERPKAL_	ENST00000473501.1_1_3:196753297-196754890:-|nuORF	42.47446043378293	0.6409579893742323	4				NaN	NaN	0	NaN	8877	3411	12287
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12291	32.36	NaN	2810.2	30	0	583.37	0.106	+			18625	ISSTKRPY	8	57	476.2662419677626	NaN	0	476.2662658691406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ISSTKRPY_	ENSG00000206075|ENST00000382771|SERPINB5;nc|ENSG00000206075|P36952-2|SERPINB5;SERPINB5|p.N223Ifs*59|1|0.37|ENSG00000206075|chr18:63499217-63499217|A/-|frameshift_variant	60.97194046774394	1.7418937515398478	4				NaN	NaN	0	NaN	8878	3411	12287
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12292	32.362	NaN	2557.8	30	0	484.22	0.106	+			4302	ATGIILPAR	9	49	456.28695715359567	910.5593613739914	2	456.2870788574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATGIILPAR_	ENSG00000163909|ENST00000372852|HEYL	49.44154591367651	0.3095138337212152	4				NaN	NaN	0	NaN	8879	3411	12287
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12293	32.364	NaN	1716.3	30	0	541.84	0.038	+			39325	STAVFLRKGVD	11	39	398.2278489005844	1191.661717301953	3	398.56231689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STAVFLRKGVD_	ENST00000472831.5_1_5:176884436-176895158:-|nuORF	23.37791116691581	0.7445759747191538	4				NaN	NaN	0	NaN	8880	3411	12287
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12294	32.364	NaN	1386.2	30	0	203.14	0.138			+	18422	ISALGLVASA	10	53	451.2708534487936	NaN	0	451.2704772949219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ISALGLVASA_	REV__ENSG00000121207|ENST00000336356|LRAT;REV__ENST00000502474.5_1_4:155669525-155670285:+|nuORF	40.77816245573522	0.36390427802201647	4				NaN	NaN	0	NaN	8881	3411	12287
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12308	32.395	NaN	163390	30	0	38376	0.164	+			6140	AVQEFGLAR	9	87	495.7717967614978	989.5290405897956	2	495.7718505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVQEFGLAR_	ENSG00000169230|ENST00000303204|PRELID1;nc|ENSG00000169230|Q9Y255-2|PRELID1	138.06239232086	0.011389075116295402	4				NaN	NaN	0	NaN	8892	3414	12307
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12309	32.398	NaN	11913	30	0	5393.1	0.106				-1	 	0	61	490.2232860542005	978.432019175201	2	490.2232971191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8893	3414	12307
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12310	32.4	NaN	6563.8	30	0	1941.7	0.106	+			39348	STCIGILAK	9	65	481.770188615722	961.5258242982441	2	481.77020263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_STC(Carbamidomethyl (C))IGILAK_	EDC4|p.D801Mfs*15|1|0.26|ENSG00000038358|chr16:67880857-67880857|G/-|frameshift_variant;EDC4|p.Q792Sfs*24|1|0.37|ENSG00000038358|chr16:67880829-67880829|C/-|frameshift_variant;ENSG00000038358|ENST00000358933|EDC4;ENST00000536072.6_1_16:67909906-67914140:+|nuORF;ENST00000572221.5_1_16:67909733-67911757:+|nuORF	101.60071028292904	0.0375685401170269	4				NaN	NaN	0	NaN	8894	3414	12307
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12311	32.402	NaN	4791.9	30	0	2812.4	0.106			+	47619	VSAFGPSR	8	48	410.7190230426827	819.4234931521654	2	410.718994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSAFGPSR_	REV__ENST00000608517.1_1_1:178695276-178695324:-|nuORF	47.657333605630114	0.6087971902037268	4				NaN	NaN	0	NaN	8895	3414	12307
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12312	32.403	NaN	2309.3	30	0	716.74	0.106				-1	RALINFMLD	9	34	370.1985396962819	1107.5737896890457	3	370.1986083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_RALINFM(Oxidation (M))LD_	tr|U7T1L4|U7T1L4_FUSNUSerine--tRNAligaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=serSPE=3SV=1	32.81241826257853	0.4965981579233955	4				NaN	NaN	0	NaN	8896	3414	12307
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12313	32.405	NaN	1614.9	30	0	120.64	0.106	+			45480	TYDKGYQF	8	61	511.2348810066008	1020.4552090800016	2	511.2352294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TYDKGYQF_	ENSG00000139197|ENST00000675855|PEX5;nc|ENSG00000139197|P50542-2|PEX5;nc|ENSG00000139197|P50542-3|PEX5;nc|ENSG00000139197|P50542-4|PEX5	42.396135135203025	0.6414440140393314	4				NaN	NaN	0	NaN	8897	3414	12307
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12314	32.407	NaN	1624.8	30	0	310.31	0.036	+			32912	RDVIMREF	8	53	533.2785996369925	1064.5426463407848	2	533.278564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RDVIMREF_	ENSG00000156976|ENST00000323963|EIF4A2;ENSG00000161960|ENST00000293831|EIF4A1;ENST00000461021.1_1_3:186505247-186505672:+|nuORF;ENST00000468362.5_1_3:186503755-186505556:+|nuORF;ENST00000485101.5_1_3:186505247-186505556:+|nuORF;ENST00000492144.5_1_3:186503809-186505672:+|nuORF;ENST00000494445.1_1_3:186505247-186506105:+|nuORF;ENST00000578324.5_1_17:7477602-7481249:+|nuORF;ENST00000581544.5_1_17:7477924-7481249:+|nuORF;ENST00000581621.1_1_17:7476159-7481249:+|nuORF;ENST00000581808.1_1_17:7481021-7481457:+|nuORF;ENST00000587313.1_1_18:12913551-12913704:+|nuORF;nc|ENSG00000156976|Q14240-2|EIF4A2;nc|ENSG00000161960|P60842-2|EIF4A1	31.529811441608018	0.715883593221515	4				NaN	NaN	0	NaN	8898	3414	12307
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12331	32.442	NaN	46529	30	0	14057	0.214	+			3275	ASLPLAVTK	9	80	450.2814633311323	898.5483737290646	2	450.28125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASLPLAVTK_	ENSG00000160796|ENST00000450053|NBEAL2;nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2;nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2	120.30596017624542	0.02101454110788768	4				NaN	NaN	0	NaN	8912	3417	12330
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12332	32.446	NaN	2754	30	0	243.57	0.106	+			50820	YESAKVLNV	9	63	511.77885343839495	1021.5431539435899	2	511.77874755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YESAKVLNV_	ENSG00000130222|ENST00000252506|GADD45G	53.08895987439943	0.27122541748218487	4				NaN	NaN	0	NaN	8913	3417	12330
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12333	32.448	NaN	1681.5	30	0	434.84	0.106			+	22945	KVQQQQPQ	8	55	492.2682188077039	982.5218846822078	2	492.2677001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KVQQQQPQ_	REV__ENSG00000169474|ENST00000368762|SPRR1A	68.484700416344	0.4195245774506064	4				NaN	NaN	0	NaN	8914	3417	12330
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12334	32.449	NaN	1373.9	30	0	206.94	0.106	+			40469	STVTPSSAL	9	43	431.7291789793794	NaN	0	431.7287292480469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STVTPSSAL_	ENSG00000117983|ENST00000529681|MUC5B;ENSG00000117983|ENST00000529681|MUC5B;ENSG00000117983|ENST00000529681|MUC5B;MUC5B|p.E2929Gfs*98|1|0.13|ENSG00000117983|chr11:1245660-1245661|-/GC|frameshift_variant;MUC5B|p.P3417Qfs*3|1|0.41|ENSG00000117983|chr11:1247125-1247125|C/-|frameshift_variant;MUC5B|p.S3126Pfs*13|1|0.37|ENSG00000117983|chr11:1246251-1246251|C/-|frameshift_variant;MUC5B|p.S3878Pfs*27|1|0.13|ENSG00000117983|chr11:1248507-1248507|C/-|frameshift_variant;MUC5B|p.S3878Pfs*27|1|0.13|ENSG00000117983|chr11:1248507-1248507|C/-|frameshift_variant;MUC5B|p.S4017Lfs*56|1|0.22|ENSG00000117983|chr11:1248928-1248929|-/C|frameshift_variant;MUC5B|p.S4017Lfs*56|1|0.22|ENSG00000117983|chr11:1248928-1248929|-/C|frameshift_variant;MUC5B|p.S4017Lfs*56|1|0.22|ENSG00000117983|chr11:1248928-1248929|-/C|frameshift_variant;MUC5B|p.T4706Pfs*4|2|0.37|ENSG00000117983|chr11:1250996-1250996|A/-|frameshift_variant;MUC5B|p.T4706Pfs*4|2|0.37|ENSG00000117983|chr11:1250996-1250996|A/-|frameshift_variant;MUC5B|p.T4706Pfs*4|2|0.37|ENSG00000117983|chr11:1250996-1250996|A/-|frameshift_variant	58.78195531508484	0.1545138866451181	4				NaN	NaN	0	NaN	8915	3417	12330
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12335	32.451	NaN	1356.7	30	0	140.48	0.036			+	31111	QFSKLTKFI	9	51	556.3287295875373	1110.6429062418745	2	556.329833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QFSKLTKFI_	REV__ENST00000532672.5_1_11:102219446-102220646:+|nuORF	32.81241826257853	0.4965981579233955	4				NaN	NaN	0	NaN	8916	3417	12330
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12352	32.486	NaN	1599.7	30	0	250.36	0.214	+			7020	CSASVIYHY	9	60	550.2482253910126	1098.4818978488252	2	550.2488403320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_C(Carbamidomethyl (C))SASVIYHY_	ENSG00000167632|ENST00000438773|TRAPPC9;nc|ENSG00000167632|Q96Q05-2|TRAPPC9;nc|ENSG00000167632|Q96Q05-3|TRAPPC9;TRAPPC9|p.Q563Hfs*5|1|0.04|ENSG00000167632|chr8:140300548-140300549|-/ATGCATGTGCA|frameshift_variant	53.351449002276354	0.2690372970092375	4				NaN	NaN	0	NaN	8930	3420	12351
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12353	32.489	NaN	5166.8	30	0	1702.7	0.034	+			20243	KELVLQTV	8	59	465.28681411022353	928.5590752872471	2	465.2869567871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KELVLQTV_	nc|ENSG00000180376|A2RUB6-2|CCDC66	64.20726635412375	0.4601301477144759	4				NaN	NaN	0	NaN	8931	3420	12351
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12368	32.521	NaN	5570.7	30	0	1825	0.215				-1	 	0	59	454.24925670764725	906.4839604820945	2	454.2491760253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8943	3423	12367
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12369	32.525	NaN	3115.3	30	0	323.52	0.106	+			19937	KEFIKIVEA	9	72	538.8210848858453	1075.6276168384904	2	538.822509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEFIKIVEA_	ENSG00000198898|ENST00000361183|CAPZA2;ENST00000426421.5_1_7:116544367-116557918:+|nuORF	102.0615471778698	0.03709830720253279	4				NaN	NaN	0	NaN	8944	3423	12367
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12370	32.527	NaN	1042.8	30	0	130.95	0.035			+	11917	FVAKEQEY	8	54	507.25096726665583	1012.4873816001117	2	507.24884033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FVAKEQEY_	REV__ENSG00000158716|ENST00000368107|DUSP23	37.15910966729921	0.6739408393984688	4				NaN	NaN	0	NaN	8945	3423	12367
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12382	32.552	NaN	3716.4	30	0	612.12	0.214			+	26170	LSRELAIA	8	59	436.7635317917424	871.5125106502849	2	436.7634582519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSRELAIA_	REV__ENSG00000178394|ENST00000323865|HTR1A;REV__ENSG00000180739|ENST00000333430|S1PR5;REV__HTR1A|p.V57M|2|0.22|ENSG00000178394|chr5:63961551-63961551|C/T|missense_variant;REV__nc|ENSG00000180739|Q9H228-2|S1PR5	62.107414245175825	0.4809183816468817	4				NaN	NaN	0	NaN	8954	3426	12381
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12383	32.556	NaN	1281.9	30	0	181.26	0.106			+	36876	SIGERERSK	9	51	531.290283203125	NaN	0	531.290283203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SIGERERSK_	REV__ENSG00000197168|ENST00000684899|NEK5	45.97224482568171	0.23445038899310136	4				NaN	NaN	0	NaN	8955	3426	12381
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12384	32.558	NaN	643.13	30	0	171.29	0.031				-1	 	0	21	350.20663382964136	698.3987147260827	2	350.2067565917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8956	3426	12381
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12401	32.593	NaN	26092	30	0	5528.9	0.214	+			12588	GEHGLIIRV	9	74	497.2954937183295	992.576434503459	2	497.2954406738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEHGLIIRV_	ENSG00000078618|ENST00000352171|NRDC;nc|ENSG00000078618|O43847-2|NRDC	106.68306549817024	0.032382560583716295	4				NaN	NaN	0	NaN	8970	3429	12400
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12402	32.596	NaN	4761.5	30	0	1465.4	0.106	+			45056	TVGVLLAAK	9	57	436.2840771054297	870.5536012776594	2	436.28399658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVGVLLAAK_	ENSG00000138674|ENST00000395310|SEC31A;nc|ENSG00000138674|O94979-10|SEC31A;nc|ENSG00000138674|O94979-2|SEC31A;nc|ENSG00000138674|O94979-3|SEC31A;nc|ENSG00000138674|O94979-4|SEC31A;nc|ENSG00000138674|O94979-6|SEC31A;nc|ENSG00000138674|O94979-7|SEC31A;nc|ENSG00000138674|O94979-8|SEC31A;nc|ENSG00000138674|O94979-9|SEC31A;SEC31A|p.P1058Qfs*62|1|0.4|ENSG00000138674|chr4:82827487-82827487|G/-|frameshift_variant	32.81241826257853	0.4965981579233955	4				NaN	NaN	0	NaN	8971	3429	12400
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12403	32.598	NaN	2160.7	30	0	485.53	0.106	+			43839	TLSVVSASLA	10	60	474.27337234526885	946.5321917573377	2	474.2737731933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TLSVVSASLA_	ENSG00000185085|ENST00000330574|INTS5;INTS5|p.A801Hfs*4|1|0.19|ENSG00000185085|chr11:62647679-62647679|C/-|frameshift_variant	62.107414245175825	0.3466735403679669	4				NaN	NaN	0	NaN	8972	3429	12400
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12404	32.6	NaN	2434.1	30	0	322.62	0.037	+			33522	RKTGHFVQR	9	64	564.8223087074152	1127.6300644816304	2	564.8231201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RKTGHFVQR_	ENST00000434748.2_2_12:133160750-133160867:+|nuORF	39.252832667884924	0.4290233611298554	4				NaN	NaN	0	NaN	8973	3429	12400
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12422	32.638	NaN	4095.2	30	0	1011.2	0.214	+			10979	FEEASNQL	8	55	469.21676178110806	936.4189706290161	2	469.216064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FEEASNQL_	ENSG00000079246|ENST00000392132|XRCC5	110.11987700582712	0.24509564897437786	4				NaN	NaN	0	NaN	8988	3432	12421
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12423	32.641	NaN	2194.7	30	0	379.62	0.035	+			41257	SVLHGMVFK	9	55	509.28141160878414	1016.5482702843683	2	509.2807312011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVLHGMVFK_	ENSG00000156261|ENST00000286788|CCT8;nc|ENSG00000156261|P50990-2|CCT8;nc|ENSG00000156261|P50990-3|CCT8	51.33545320467046	0.2872990594074956	4				NaN	NaN	0	NaN	8989	3432	12421
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12440	32.676	NaN	7342.7	30	0	2095.6	0.214	+			18277	IPIKNVEM	8	66	472.2674184905141	942.5202840478282	2	472.2678527832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IPIKNVEM_	ENSG00000089472|ENST00000343002|HEPH;nc|ENSG00000089472|Q9BQS7-2|HEPH;nc|ENSG00000089472|Q9BQS7-3|HEPH;nc|ENSG00000089472|Q9BQS7-4|HEPH	82.24051045832904	0.30490469762271794	4				NaN	NaN	0	NaN	9003	3435	12439
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12441	32.68	NaN	8769	30	0	2917.2	0.106	+			44803	TTQVVGILK	9	63	479.80008730876796	957.5856216843359	2	479.80078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTQVVGILK_	ENSG00000198898|ENST00000361183|CAPZA2;ENST00000426421.5_1_7:116544367-116557918:+|nuORF	104.01359247289065	0.03510646158778409	4				NaN	NaN	0	NaN	9004	3435	12439
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12442	32.682	NaN	3390.3	30	0	1384.7	0.036			+	28720	NNKVYLDLK	9	54	553.8141190943993	1105.6136852555985	2	553.81494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NNKVYLDLK_	REV__tr|U7SUJ2|U7SUJ2_FUSNUSmallconductancemechanosensitivechannelOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01189PE=3SV=1	40.77816245573522	0.41113185337114944	4				NaN	NaN	0	NaN	9005	3435	12439
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12456	32.712	NaN	18124	30	0	2870.5	0.214	+			38832	SSNIFTVAK	9	70	483.7661524321267	965.5177519310535	2	483.76629638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSNIFTVAK_	ENSG00000100280|ENST00000357586|AP1B1;ENST00000482818.1_1_22:29726183-29727937:-|nuORF;nc|ENSG00000100280|Q10567-2|AP1B1;nc|ENSG00000100280|Q10567-3|AP1B1;nc|ENSG00000100280|Q10567-4|AP1B1	142.36107225718385	0.009372392051035914	4				NaN	NaN	0	NaN	9016	3438	12455
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12457	32.715	NaN	6715.6	30	0	2013.6	0.106	+			802	AEFTKSIAKF	10	45	381.213052182116	NaN	0	381.213134765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEFTKSIAKF_	ENSG00000118363|ENST00000263672|SPCS2	77.53327743719008	0.11160061521804975	4				NaN	NaN	0	NaN	9017	3438	12455
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12458	32.717	NaN	2991.6	30	0	586.17	0.106	+			49102	VVLGLVQSL	9	58	464.29723138835914	926.5799098435183	2	464.29718017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVLGLVQSL_	ADCY8|p.A1194V|1|0.21|ENSG00000155897|chr8:130780565-130780565|G/A|missense_variant;ENSG00000155897|ENST00000286355|ADCY8	66.42927471994793	0.16001998865088202	4				NaN	NaN	0	NaN	9018	3438	12455
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12459	32.719	NaN	2277.3	30	0	192.05	0.106	+			1224	AEQLVHVV	8	57	447.7554593975123	893.4963658618246	2	447.755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEQLVHVV_	ENSG00000132549|ENST00000357162|VPS13B;ENST00000521932.1_1_8:100168860-100253210:+|nuORF;nc|ENSG00000132549|Q7Z7G8-3|VPS13B;nc|ENSG00000132549|Q7Z7G8-4|VPS13B;nc|ENSG00000132549|Q7Z7G8-6|VPS13B;nc|ENSG00000132549|Q7Z7G8|VPS13B;VPS13B|p.I1913*|1|0.3|ENSG00000132549|chr8:99642246-99642246|A/-|frameshift_variant;VPS13B|p.M3156Ifs*2|1|0.07|ENSG00000132549|chr8:99832427-99832428|-/TA|frameshift_variant;VPS13B|p.S3988Lfs*4|1|0.55|ENSG00000132549|chr8:99875552-99875553|-/C|frameshift_variant;VPS13B|p.S3988Pfs*25|1|0.11|ENSG00000132549|chr8:99875553-99875553|C/-|frameshift_variant	66.42927471994793	0.4381325844043345	4				NaN	NaN	0	NaN	9019	3438	12455
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12460	32.721	NaN	4201.1	30	0	526.55	0.106				-1	 	0	68	485.7998882579981	969.5852235827962	2	485.7998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9020	3438	12455
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12461	32.722	NaN	760.64	30	0	197.15	0.036			+	-1	PLVVEGGTYC	10	44	547.7636596967334	NaN	0	547.7626342773438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_PLVVEGGTYC(Carbamidomethyl (C))_	REV__ENSG00000166743|ENST00000520010|ACSM1	21.9598887501803	0.4201028297492154	4				NaN	NaN	0	NaN	9021	3438	12455
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12476	32.753	NaN	5940.8	30	0	790.35	0.214	+			6976	CPTKLVKSA	9	66	502.2831007337235	1002.551648534247	2	502.78094482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_C(Carbamidomethyl (C))PTKLVKSA_	AHCTF1|p.E1870Kfs*19|1|0.27|ENSG00000153207|chr1:246850426-246850426|T/-|frameshift_variant;ENSG00000153207|ENST00000648844|AHCTF1;ENST00000420969.1_1_2:162357792-162360000:-|nuORF;ENST00000470300.5_1_1:247004234-247028597:-|nuORF;nc|ENSG00000153207|Q8WYP5-2|AHCTF1;nc|ENSG00000153207|Q8WYP5-3|AHCTF1	51.33545320467046	0.2872990594074956	4				NaN	NaN	0	NaN	9033	3441	12475
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12477	32.757	NaN	2597.8	30	0	425.4	0.106	+			7952	DSMVLAILGKG	11	60	552.3104391102487	1102.6063252872973	2	552.3101806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DSMVLAILGKG_	ENSG00000183960|ENST00000328405|KCNH8	54.776311868738084	0.3700837260462177	4				NaN	NaN	0	NaN	9034	3441	12475
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12478	32.759	NaN	10651	30	0	2882.8	0.106	+			5148	ATSVITIVK	9	59	466.294565683353	930.5745784335061	2	466.79656982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATSVITIVK_	ENSG00000197063|ENST00000357736|MAFG	88.17693792209575	0.07000514020414955	4				NaN	NaN	0	NaN	9035	3441	12475
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12479	32.761	NaN	1865.6	30	0	239.42	0.106	+			28319	NEFTTHVM	8	58	489.72123390601854	977.4279148788371	2	489.7208557128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NEFTTHVM_	ENSG00000167081|ENST00000373489|PBX3;ENSG00000185630|ENST00000420696|PBX1;ENSG00000204304|ENST00000375050|PBX2;ENST00000478678.5_1_6:32154995-32157692:-|nuORF;ENST00000538998.1_1_9:128606084-128725334:+|nuORF;nc|ENSG00000167081|P40426-2|PBX3;nc|ENSG00000167081|P40426-5|PBX3;nc|ENSG00000185630|P40424-2|PBX1;nc|ENSG00000185630|P40424-3|PBX1	71.29570347882199	0.39610197767395533	4				NaN	NaN	0	NaN	9036	3441	12475
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12480	32.763	NaN	1977	30	0	754	0.106			+	25446	LPPSPPAAY	9	53	456.7446876909807	911.4748224487614	2	456.74462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LPPSPPAAY_	REV__ECM1|p.P169Lfs*9|1|0.16|ENSG00000143369|chr1:150510991-150510991|C/-|frameshift_variant;REV__ENSG00000143369|ENST00000369047|ECM1;REV__ENST00000470432.5_1_1:150480640-150482267:+|nuORF;REV__nc|ENSG00000143369|Q16610-2|ECM1;REV__nc|ENSG00000143369|Q16610-4|ECM1	33.51558372728122	0.4900267029546261	4				NaN	NaN	0	NaN	9037	3441	12475
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12481	32.764	NaN	4620.4	30	0	2245.7	0.039			+	36980	SINDQKRRHL	10	55	422.9066957436089	NaN	0	423.2411193847656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SINDQKRRHL_	REV__ENSG00000168137|ENST00000402198|SETD5;REV__ENST00000443339.5_1_3:9475802-9506425:+|nuORF;REV__nc|ENSG00000168137|Q9C0A6-2|SETD5;REV__nc|ENSG00000168137|Q9C0A6-3|SETD5;REV__SETD5|p.K1129Nfs*15|1|0.41|ENSG00000168137|chr3:9473422-9473422|A/-|frameshift_variant;REV__SETD5|p.T1366Kfs*4|1|0.35|ENSG00000168137|chr3:9475859-9475859|C/-|frameshift_variant	21.9598887501803	0.4201028297492154	4				NaN	NaN	0	NaN	9038	3441	12475
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12494	32.792	NaN	7101.8	30	0	1377.8	0.14	+			17368	IALVGKAM	8	59	401.7462878630889	801.4780227929779	2	401.7463684082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IALVGKAM_	ENSG00000163527|ENST00000295770|STT3B;STT3B|p.E758Nfs*18|1|0.05|ENSG00000163527|chr3:31633017-31633018|-/AAACATTC|frameshift_variant	62.97842346883844	0.4722955155785405	4				NaN	NaN	0	NaN	9048	3444	12493
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12510	32.827	NaN	10952	30	0	2246.7	0.214	+			31842	QPSTIATSM	9	69	468.22849038418013	934.4424278351603	2	468.2286071777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QPSTIATSM_	ENSG00000242372|ENST00000374450|EIF6;nc|ENSG00000242372|P56537-2|EIF6	110.11987700582712	0.028875675806141952	4				NaN	NaN	0	NaN	9061	3447	12509
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12511	32.831	NaN	4775.7	30	0	1395.7	0.106	+			25502	LPSKEVIK	8	64	457.28955067392985	912.5645484146597	2	457.28961181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LPSKEVIK_	ATP2C2|p.E482Rfs*13|1|0.43|ENSG00000064270|chr16:84446364-84446364|A/-|frameshift_variant;ATP2C2|p.Y727Tfs*11|2|0.26|ENSG00000064270|chr16:84459146-84459146|T/-|frameshift_variant;ENSG00000064270|ENST00000262429|ATP2C2;nc|ENSG00000064270|O75185-2|ATP2C2;nc|ENSG00000064270|O75185-3|ATP2C2	45.9519527083369	0.6193794311207887	4				NaN	NaN	0	NaN	9062	3447	12509
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12512	32.833	NaN	3183.4	30	0	606.47	0.106	+			5329	ATVNEIVLK	9	63	493.7975997853913	NaN	0	493.7973327636719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATVNEIVLK_	ARHGEF18-MAPKAP1|1|fusion;ARHGEF18-MAPKAP1|2|fusion;ENSG00000119487|ENST00000265960|MAPKAP1;ENST00000497932.5_1_9:128201168-128209649:-|nuORF;nc|ENSG00000119487|Q9BPZ7-2|MAPKAP1;nc|ENSG00000119487|Q9BPZ7-3|MAPKAP1;nc|ENSG00000119487|Q9BPZ7-4|MAPKAP1	125.71293069911285	0.001249134308510144	4				NaN	NaN	0	NaN	9063	3447	12509
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12513	32.835	NaN	1407.9	30	0	560.82	0.106	+			29381	PALPGLKLS	9	47	448.28411751921425	NaN	0	448.2839050292969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PALPGLKLS_	ENSG00000240505|ENST00000261652|TNFRSF13B;nc|ENSG00000240505|O14836-2|TNFRSF13B;TNFRSF13B|p.D191Ifs*30|1|0.38|ENSG00000240505|chr17:16940386-16940386|C/-|frameshift_variant	37.15910966729921	0.2899585034171616	4				NaN	NaN	0	NaN	9064	3447	12509
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12514	32.836	NaN	2316	30	0	380.9	0.106	+			42774	TEAEIDAHL	9	61	499.74310167980065	997.4716504264013	2	499.7430419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TEAEIDAHL_	ENSG00000100902|ENST00000261479|PSMA6;ENST00000400275.2_1_Y:15398697-15399255:+|nuORF;ENST00000554457.1_1_14:35786443-35786509:+|nuORF;nc|ENSG00000100902|P60900-2|PSMA6;nc|ENSG00000100902|P60900-3|PSMA6	87.75429964447693	0.0711966946989736	4				NaN	NaN	0	NaN	9065	3447	12509
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12515	32.838	NaN	1675.3	30	0	239.91	0.036	+			34571	RVMDLICEK	9	60	553.7886028795502	NaN	0	553.7891845703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RVMDLICEK_	ENSG00000106524|ENST00000306999|ANKMY2	63.42647028704847	0.13470499157941143	4				NaN	NaN	0	NaN	9066	3447	12509
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12516	32.839	NaN	982.41	30	0	124.44	0.14				-1	GTFKHRKM	8	49	510.77252197265625	NaN	0	510.77252197265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_GTFKHRKM(Oxidation (M))_	ENSG00000140284|ENST00000267842|SLC27A2;nc|ENSG00000140284|O14975-2|SLC27A2	31.954861631926434	1.7418937515398478	4				NaN	NaN	0	NaN	9067	3447	12509
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12548	32.911	NaN	41760	30	0	5897.6	0.214	+			50463	YAEVGRVL	8	83	453.7555022256857	905.4964515181714	2	453.7557373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YAEVGRVL_	ANKRD17|p.L2249Yfs*84|1|0.34|ENSG00000132466|chr4:73090884-73090884|G/-|frameshift_variant;ENSG00000131503|ENST00000360839|ANKHD1;ENSG00000132466|ENST00000358602|ANKRD17;ENST00000514252.1_1_4:73978989-74017230:-|nuORF;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1;nc|ENSG00000132466|O75179-2|ANKRD17;nc|ENSG00000132466|O75179-6|ANKRD17;nc|ENSG00000132466|O75179-7|ANKRD17	104.74654710444128	0.24806011021879068	4				NaN	NaN	0	NaN	9093	3453	12547
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12549	32.914	NaN	4379.4	30	0	668.91	0.106	+			27651	MPSAVHPSPA	10	69	497.24589381032024	992.4772346874405	2	497.2461242675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MPSAVHPSPA_	ENST00000474140.1_1_1:3808157-3808313:-|nuORF	54.776311868738084	0.41334902933431344	4				NaN	NaN	0	NaN	9094	3453	12547
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12550	32.916	NaN	1780.3	30	0	745.14	0.106	+			8521	EATWNPSL	8	57	459.22335659188934	916.4321602505787	2	459.2232666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EATWNPSL_	ENST00000520622.5_1_13:45944147-45944267:+|nuORF	85.35947970620816	0.2915182781752196	4				NaN	NaN	0	NaN	9095	3453	12547
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12551	32.918	NaN	2153.5	30	0	308.95	0.106	+			9833	EPLSSETQY	9	64	527.2400942874222	1052.4656356416442	2	527.2409057617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EPLSSETQY_	ENSG00000143398|ENST00000368888|PIP5K1A;ENST00000480546.1_1_10:95718567-95721153:-|nuORF;nc|ENSG00000143398|Q99755-2|PIP5K1A;nc|ENSG00000143398|Q99755-3|PIP5K1A;nc|ENSG00000143398|Q99755-4|PIP5K1A;nc|ENSG00000180764|A2A3N6|PIPSL	62.107414245175825	0.1960472003779324	4				NaN	NaN	0	NaN	9096	3453	12547
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12552	32.92	NaN	1646.3	30	0	238.97	0.106	+			18954	IVQDEILAH	9	52	519.2842841165483	1036.5540152998965	2	519.786376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IVQDEILAH_	ENSG00000171453|ENST00000642195|POLR1C;ENST00000481352.6_1_6:43484832-43487644:+|nuORF;nc|ENSG00000171453|O15160-2|POLR1C	63.42647028704847	0.1850514934184437	4				NaN	NaN	0	NaN	9097	3453	12547
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12553	32.922	NaN	1860.6	30	0	210.74	0.106			+	620	ADVHEPPL	8	43	439.22435156662704	876.4341502000541	2	439.224365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ADVHEPPL_	REV__USH2A|p.S2148A|1|0.2|ENSG00000042781|chr1:216000446-216000446|A/C|missense_variant	46.76643321282427	0.6143254112625767	4				NaN	NaN	0	NaN	9098	3453	12547
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12554	32.923	NaN	1632.9	30	0	906.12	0.036	+			8695	EEAPRPALLN	10	43	555.3006606254235	NaN	0	555.301025390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EEAPRPALLN_	ENSG00000089041|ENST00000328963|P2RX7;ENST00000538011.5_1_12:121592718-121622602:+|nuORF;ENST00000539606.5_1_12:121592718-121615069:+|nuORF;ENST00000539695.5_1_12:121600150-121613220:+|nuORF;nc|ENSG00000089041|Q99572-2|P2RX7;nc|ENSG00000089041|Q99572-5|P2RX7;nc|ENSG00000089041|Q99572-7|P2RX7;nc|ENSG00000089041|Q99572-8|P2RX7	27.882242232435846	0.4086243523356342	4				NaN	NaN	0	NaN	9099	3453	12547
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12570	32.957	NaN	5707.2	30	0	1322.5	0.214	+			24228	LESKGLTL	8	56	430.75800578943716	859.5014586456743	2	430.75787353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LESKGLTL_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;CLCA4|p.S847Kfs*4|1|0.28|ENSG00000016602|chr1:86580120-86580121|-/A|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1;ENSG00000016602|ENST00000370563|CLCA4	93.1432384553994	0.2679547234115296	4				NaN	NaN	0	NaN	9112	3456	12569
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12571	32.96	NaN	2710.3	30	0	1544.9	0.106	+			31543	QLLLQPQL	8	53	476.79477512698	951.5749973207601	2	476.7947692871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QLLLQPQL_	PCM1|p.K787Nfs*31|2|0.32|ENSG00000078674|chr8:17962067-17962067|A/-|frameshift_variant	47.91560031466742	0.6071945918984287	4				NaN	NaN	0	NaN	9113	3456	12569
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12572	32.962	NaN	1703.3	30	0	166.55	0.106	+			24953	LLAKVFITK	9	62	516.8442495200778	1031.6739461069556	2	516.8453369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LLAKVFITK_	ENSG00000187736|ENST00000356853|NHEJ1;nc|ENSG00000187736|Q9H9Q4-2|NHEJ1	70.8162118820467	0.13725933411854815	4				NaN	NaN	0	NaN	9114	3456	12569
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12573	32.964	NaN	1237.8	30	0	145.31	0.106			+	50872	YFEVLLME	8	55	522.2613818334128	1042.5082107336254	2	522.260986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YFEVLLME_	REV__nc|ENSG00000008382|Q8N594|MPND	50.0245360154114	0.5941082100236891	4				NaN	NaN	0	NaN	9115	3456	12569
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12574	32.966	NaN	985.12	30	0	213.17	0.106				-1	GTMTGMLYK	9	44	509.24044007324693	1016.4663272132939	2	509.2416076660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_GTM(Oxidation (M))TGMLYK_	ENSG00000178440|ENST00000651763|TIMM23B-AGAP6;ENSG00000204152|ENST00000651259|TIMM23B;ENSG00000265354|ENST00000580018|TIMM23;nc|ENSG00000204152|Q5SRD1-2|TIMM23B	27.882242232435846	0.5426732730940306	4				NaN	NaN	0	NaN	9116	3456	12569
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12575	32.968	NaN	1341.9	30	0	161.3	0.035			+	43770	TLHHKLKF	8	56	512.308215742031	NaN	0	512.3084716796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TLHHKLKF_	REV__ENSG00000213588|ENST00000395064|ZBTB9	40.5726180659479	1.7418937515398478	4				NaN	NaN	0	NaN	9117	3456	12569
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12590	32.997	NaN	21746	30	0	11112	0.214	+			32475	QVMSLGLQK	9	67	502.2831007337235	1002.551648534247	2	502.28375244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QVMSLGLQK_	ENST00000314423.11_1_16:69166475-69170710:+|nuORF;ENST00000562237.5_1_16:69166520-69170710:+|nuORF	158.07458414430337	0.004987072822166904	4				NaN	NaN	0	NaN	9129	3459	12589
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12591	33	NaN	16516	30	0	2226	0.106				-1	SECGKAFSL	9	75	499.733869469968	997.453186006736	2	499.7337951660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SEC(Carbamidomethyl (C))GKAFSL_	ENSG00000106261|ENST00000324306|ZKSCAN1;ENSG00000186230|ENST00000334181|ZNF749;ENSG00000186272|ENST00000307658|ZNF17;ENSG00000186812|ENST00000330501|ZNF397;ENSG00000198393|ENST00000328654|ZNF26;ENST00000602050.1_1_19:57930944-57932846:+|nuORF;nc|ENSG00000186272|P17021-3|ZNF17;nc|ENSG00000186272|P17021|ZNF17;ZNF852|p.G393S|1|0.24|ENSG00000178917|chr3:44499600-44499600|C/T|missense_variant	114.8945686534367	0.024290463251177924	4				NaN	NaN	0	NaN	9130	3459	12589
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12592	33.002	NaN	5713.6	30	0	1365.3	0.106	+			24263	LEVHVDPVG	9	66	482.7583236093101	963.5020942854202	2	482.75830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LEVHVDPVG_	ENSG00000105696|ENST00000262817|TMEM59L;ENST00000598660.1_1_19:18723732-18729158:+|nuORF	40.5726180659479	0.4135428067754104	4				NaN	NaN	0	NaN	9131	3459	12589
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12593	33.004	NaN	4730.8	30	0	1354.4	0.106	+			25998	LSKKTSLPN	9	58	494.29616286930235	986.5777728054047	2	494.29486083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSKKTSLPN_	DLEC1|p.Y1310Mfs*121|1|0.59|ENSG00000008226|chr3:38116521-38116521|T/-|frameshift_variant;ENSG00000008226|ENST00000308059|DLEC1;nc|ENSG00000008226|Q9Y238-3|DLEC1	52.936696900407355	0.27249468807391813	4				NaN	NaN	0	NaN	9132	3459	12589
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12594	33.006	NaN	4686.3	30	0	801.76	0.106	+			1709	AGVNFAIAK	9	67	445.7580124304841	889.5014719277682	2	445.7579345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AGVNFAIAK_	ENSG00000138375|ENST00000357276|SMARCAL1	152.47061609516894	0.006293267927334181	4				NaN	NaN	0	NaN	9133	3459	12589
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12595	33.008	NaN	1676.6	30	0	248.61	0.035			+	3784	ATAEVTFLK	9	59	490.2763010413547	978.5380491495094	2	490.2762451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATAEVTFLK_	REV__ENSG00000161270|ENST00000378910|NPHS1;REV__nc|ENSG00000161270|O60500-2|NPHS1;REV__NPHS1|p.Q839Rfs*8|1|0.46|ENSG00000161270|chr19:35842272-35842272|G/-|frameshift_variant;REV__NPHS1|p.S1186Vfs*10|1|0.44|ENSG00000161270|chr19:35830883-35830884|-/G|frameshift_variant	42.396135135203025	0.392153681582562	4				NaN	NaN	0	NaN	9134	3459	12589
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12596	33.008	NaN	3072.4	30	0	449.06	0.14	+			28293	NECGKAFSL	9	61	513.2392585361966	1024.4639641391932	2	513.2396240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_NEC(Carbamidomethyl (C))GKAFSL_	ENSG00000197062|ENST00000421553|ZSCAN26;ENSG00000197782|ENST00000683561|ZNF780A;nc|ENSG00000197062|Q16670-2|ZSCAN26;nc|ENSG00000197062|Q16670|ZSCAN26;nc|ENSG00000197782|O75290-3|ZNF780A	81.52500206392136	0.09095445986635249	4				NaN	NaN	0	NaN	9135	3459	12589
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12614	33.046	NaN	63084	30	0	18256	0.214	+			44831	TTSVITIVK	9	77	481.2998966340328	960.5852403348656	2	481.2998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTSVITIVK_	ENSG00000198517|ENST00000343242|MAFK	154.1183686248401	0.005909203230691971	4				NaN	NaN	0	NaN	9150	3462	12613
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12615	33.05	NaN	7358.4	30	0	662.59	0.106	+			39565	STGHVGFIFK	10	63	546.7954337398337	1091.5763145464673	2	546.7957763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STGHVGFIFK_	ENSG00000137575|ENST00000260130|SDCBP;ENST00000523441.1_1_8:59490633-59492419:+|nuORF;nc|ENSG00000137575|O00560-2|SDCBP;nc|ENSG00000137575|O00560-3|SDCBP	65.46538089061403	0.31613324008013116	4				NaN	NaN	0	NaN	9151	3462	12613
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12616	33.052	NaN	4189.2	30	0	885.8	0.106			+	24973	LLCLPCEIF	9	65	525.7719225468486	1049.529292160497	2	525.7717895507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LLCLPCEIF_	REV__ENSG00000034677|ENST00000341084|RNF19A;REV__nc|ENSG00000034677|Q9NV58-2|RNF19A;REV__nc|ENSG00000034677|Q9NV58-3|RNF19A	62.97842346883844	0.18878643064686845	4				NaN	NaN	0	NaN	9152	3462	12613
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12617	33.054	NaN	2701	30	0	1467.3	0.106			+	7396	DEEKKAEVK	9	60	538.2837073048905	1074.552861676581	2	538.28466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DEEKKAEVK_	REV__NEFH|p.A897D|1|0.4|ENSG00000100285|chr22:29490330-29490330|C/A|missense_variant	69.6276240434122	0.14239879520340665	4				NaN	NaN	0	NaN	9153	3462	12613
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12618	33.056	NaN	649.17	30	0	57.301	0.106			+	-1	MWIMKGYP	8	43	521.2467586177901	NaN	0	521.246826171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_M(Oxidation (M))WIMKGYP_	REV__CNTN4|p.G935Dfs*35|1|0.41|ENSG00000144619|chr3:3043692-3043692|A/-|frameshift_variant;REV__ENSG00000144619|ENST00000418658|CNTN4;REV__ENST00000484686.1_1_3:3081693-3097901:+|nuORF;REV__nc|ENSG00000144619|Q8IWV2-3|CNTN4;REV__nc|ENSG00000144619|Q8IWV2-4|CNTN4	39.021493756699265	1.7418937515398478	4				NaN	NaN	0	NaN	9154	3462	12613
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12619	33.057	NaN	896.92	30	0	151.15	0.038			+	51122	YMTRRIHDI	9	30	402.21239961716134	NaN	0	402.2127685546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YMTRRIHDI_	REV__ENSG00000087303|ENST00000216286|NID2;REV__nc|ENSG00000087303|Q14112-2|NID2;REV__NID2|p.K1297Nfs*26|1|0.42|ENSG00000087303|chr14:52006650-52006650|T/-|frameshift_variant;REV__NID2|p.T1203M|1|0.35|ENSG00000087303|chr14:52010990-52010990|G/A|missense_variant	17.364965105453717	0.37820932774828947	4				NaN	NaN	0	NaN	9155	3462	12613
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12635	33.089	NaN	255320	30	0	51252	0.142				-1	 	0	86	485.7998882579981	969.5852235827962	2	485.7996826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9168	3465	12634
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12636	33.092	NaN	1224.9	30	0	148.36	0.106	+			24633	LGSQVGGAM	9	40	410.20472898383736	NaN	0	410.2049255371094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LGSQVGGAM_	ENST00000441344.1_1_2:110551979-110561026:+|nuORF	34.172542307311794	0.30503706118289736	4				NaN	NaN	0	NaN	9169	3465	12634
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12637	33.094	NaN	2799.4	30	0	234.15	0.106			+	37460	SLISTNVAL	9	61	459.2669364926398	916.5193200520796	2	459.2662048339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLISTNVAL_	REV__ENSG00000212864|ENST00000391553|RNF208	71.87747018426188	0.13267044672804276	4				NaN	NaN	0	NaN	9170	3465	12634
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12638	33.095	NaN	1537.8	30	0	395.33	0.106			+	47106	VLLPFVGSL	9	51	472.7959899902344	NaN	0	472.7959899902344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VLLPFVGSL_	REV__ENSG00000165915|ENST00000362021|SLC39A13;REV__nc|ENSG00000165915|Q96H72-2|SLC39A13;REV__SLC39A13|p.Q301Vfs*38|1|0.53|ENSG00000165915|chr11:47414891-47414892|CA/-|frameshift_variant	26.79610172149135	0.34227917631780574	4				NaN	NaN	0	NaN	9171	3465	12634
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12639	33.097	NaN	1604.6	30	0	238.14	0.106	+			17906	IGGLVAGVIG	10	52	428.2685302506147	854.5225075680294	2	428.2685852050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IGGLVAGVIG_	tr|U7T6Y8|U7T6Y8_FUSNUBranched-chainaminoacidtransportsystempermeaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00056PE=4SV=1	54.76467175910256	0.41345489472286195	4				NaN	NaN	0	NaN	9172	3465	12634
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12640	33.099	NaN	1489.8	30	0	192.51	0.035	+			6141	AVQEFGLAR	9	56	495.7717967614978	989.5290405897956	2	495.7694396972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AVQEFGLAR_	ENSG00000169230|ENST00000303204|PRELID1;nc|ENSG00000169230|Q9Y255-2|PRELID1	59.93077597824379	0.21419174904018318	4				NaN	NaN	0	NaN	9173	3465	12634
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12659	33.134	NaN	4260.3	30	0	909.41	0.214	+			39541	STFSSLVAK	9	63	470.2609179295701	938.5072829259402	2	470.26031494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STFSSLVAK_	ENST00000529306.5_1_11:502127-506619:-|nuORF	67.49366992349736	0.1516260258713357	4				NaN	NaN	0	NaN	9189	3468	12658
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12660	33.138	NaN	1128.2	30	0	181.53	0.106	+			47184	VLVIPSSN	8	40	414.7447846930851	NaN	0	414.74462890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VLVIPSSN_	ENSG00000137414|ENST00000259963|FAM8A1	30.503639358989545	1.7418937515398478	4				NaN	NaN	0	NaN	9190	3468	12658
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12661	33.139	NaN	850.59	30	0	211.77	0.106	+			25367	LPGKTYSF	8	45	456.7443542480469	NaN	0	456.7443542480469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LPGKTYSF_	ENSG00000102531|ENST00000492622|FNDC3A;FNDC3A|p.R736C|1|0.09|ENSG00000102531|chr13:49191364-49191364|C/T|missense_variant;nc|ENSG00000102531|Q9Y2H6-2|FNDC3A	47.91560031466742	1.7418937515398478	4				NaN	NaN	0	NaN	9191	3468	12658
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12662	33.141	NaN	716.14	30	0	55.061	0.106	+			42354	TAHSRNNPD	9	45	506.23419189453125	NaN	0	506.23419189453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TAHSRNNPD_	ENST00000458048.1_1_1:77660646-77660778:+|nuORF	30.317721548370564	0.32449924987115025	4				NaN	NaN	0	NaN	9192	3468	12658
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12663	33.143	NaN	597.8	30	0	41.605	0.033			+	40447	STVPGKVLP	9	33	449.27392578125	NaN	0	449.27392578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STVPGKVLP_	REV__ENSG00000075420|ENST00000415807|FNDC3B;REV__ENST00000469491.5_1_3:171830269-172055226:+|nuORF;REV__ENST00000494000.1_1_3:172048292-172052928:+|nuORF;REV__FNDC3B|p.T1056Hfs*16|1|0.43|ENSG00000075420|chr3:172378419-172378420|-/C|frameshift_variant;REV__nc|ENSG00000075420|Q53EP0-2|FNDC3B	23.04248740728303	0.3589936788096251	4				NaN	NaN	0	NaN	9193	3468	12658
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12679	33.175	NaN	3498.6	30	0	1541.6	0.145	+			32281	QTMESVNLMK	10	62	590.7881204370607	1179.5616879409213	2	590.7885131835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QTMESVNLMK_	ENSG00000158006|ENST00000374282|PAFAH2	68.84614121027924	0.2867470276772903	4				NaN	NaN	0	NaN	9206	3471	12678
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12697	33.214	NaN	2511.5	30	0	366.57	0.214	+			42828	TECGKAFSL	9	62	506.74237898727847	1011.470205041357	2	506.74261474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_TEC(Carbamidomethyl (C))GKAFSL_	ENSG00000196150|ENST00000417550|ZNF250;nc|ENSG00000196150|P15622-2|ZNF250;nc|ENSG00000196150|P15622|ZNF250	58.22992032128504	0.22837015374068087	4				NaN	NaN	0	NaN	9221	3474	12696
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12698	33.217	NaN	2134.8	30	0	302.79	0.106	+			27674	MPTTERVTL	9	57	524.2794385889956	1046.5443242447911	2	524.2799072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MPTTERVTL_	CARD17-CASP1|1|fusion;CARD17-CASP1|2|fusion;CARD17-CASP1|3|fusion;CARD17-CASP1|4|fusion;CARD17-CASP1|5|fusion;ENSG00000137752|ENST00000533400|CASP1;nc|ENSG00000137752|P29466-2|CASP1;nc|ENSG00000137752|P29466-3|CASP1;nc|ENSG00000137752|P29466-4|CASP1;nc|ENSG00000137752|P29466-5|CASP1	65.46538089061403	0.16805504838372562	4				NaN	NaN	0	NaN	9222	3474	12696
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12699	33.219	NaN	2419.8	30	0	699.35	0.106	+			28838	NPSGNLTETY	10	46	548.2519331890346	1094.4893134448691	2	548.2520751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NPSGNLTETY_	ENSG00000196924|ENST00000369850|FLNA;FLNA|p.G2237Efs*109|1|0.28|ENSG00000196924|chrX:154352240-154352240|C/-|frameshift_variant;FLNA|p.Q1716Sfs*23|2|0.38|ENSG00000196924|chrX:154354896-154354896|G/-|frameshift_variant;FLNA|p.R2520Vfs*16|1|0.7|ENSG00000196924|chrX:154349560-154349560|G/-|frameshift_variant;nc|ENSG00000196924|P21333-2|FLNA	47.95952297671804	0.47580206326914537	4				NaN	NaN	0	NaN	9223	3474	12696
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12700	33.221	NaN	2136	30	0	263.94	0.106	+			25161	LLTRTGGAY	9	55	476.26630675993783	950.5180605866757	2	476.76824951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LLTRTGGAY_	ENSG00000163510|ENST00000410053|CWC22	51.33545320467046	0.2872990594074956	4				NaN	NaN	0	NaN	9224	3474	12696
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12701	33.223	NaN	947.17	30	0	137.7	0.106	+			7544	DGVVVTINK	9	43	472.7742614746094	NaN	0	472.7742614746094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DGVVVTINK_	ENSG00000055957|ENST00000273283|ITIH1;nc|ENSG00000055957|P19827-2|ITIH1;nc|ENSG00000055957|P19827-3|ITIH1	42.396135135203025	0.2590952873412954	4				NaN	NaN	0	NaN	9225	3474	12696
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12702	33.225	NaN	4503.9	30	0	1019.3	0.038	+			48468	VTLQQLHCLK	10	42	394.893680461403	1181.659211984409	3	394.89373779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTLQQLHCLK_	ENST00000310613.7_1_4:70626187-70626241:-|nuORF	22.579656572578934	0.6954366826851017	4				NaN	NaN	0	NaN	9226	3474	12696
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12703	33.225	NaN	1394.5	30	0	153.08	0.139	+			30637	QASSTLLLV	9	53	466.276521132419	930.5384893316381	2	466.2778015136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QASSTLLLV_	ENST00000261839.11_1_15:52548900-52553134:-|nuORF	31.954861631926434	0.5046124803899898	4				NaN	NaN	0	NaN	9227	3474	12696
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12717	33.257	NaN	4348	30	0	745.99	0.214	+			7097	CVYHGTLLG	9	70	481.74163067656895	961.4687084199379	2	481.7416687011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CVYHGTLLG_	MET|p.D1099G|1|0.23|ENSG00000105976|chr7:116777425-116777425|A/G|missense_variant	50.0245360154114	0.3026755932229825	4				NaN	NaN	0	NaN	9238	3477	12716
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12718	33.26	NaN	2616.9	30	0	390.35	0.106	+			50464	YAEVGRVL	8	53	453.7555022256857	905.4964515181714	2	453.755615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YAEVGRVL_	ANKRD17|p.L2249Yfs*84|1|0.34|ENSG00000132466|chr4:73090884-73090884|G/-|frameshift_variant;ENSG00000131503|ENST00000360839|ANKHD1;ENSG00000132466|ENST00000358602|ANKRD17;ENST00000514252.1_1_4:73978989-74017230:-|nuORF;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1;nc|ENSG00000132466|O75179-2|ANKRD17;nc|ENSG00000132466|O75179-6|ANKRD17;nc|ENSG00000132466|O75179-7|ANKRD17	82.24051045832904	0.30490469762271794	4				NaN	NaN	0	NaN	9239	3477	12716
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12719	33.262	NaN	1172.9	30	0	237.11	0.035	+			17127	HSPVRPVW	8	51	489.2684046206705	976.522256308141	2	489.2680969238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HSPVRPVW_	ENST00000394691.6_2_14:65210564-65210660:+|nuORF	42.47446043378293	0.6409579893742323	4				NaN	NaN	0	NaN	9240	3477	12716
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12734	33.294	NaN	5826.5	30	0	3555.9	0.214	+			35504	SATTSPFFK	9	49	493.2532393516461	984.4919257700922	2	493.2536926269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SATTSPFFK_	ENSG00000133961|ENST00000555238|NUMB;nc|ENSG00000133961|P49757-2|NUMB;nc|ENSG00000133961|P49757-3|NUMB;nc|ENSG00000133961|P49757-4|NUMB;nc|ENSG00000133961|P49757-5|NUMB;nc|ENSG00000133961|P49757-6|NUMB;nc|ENSG00000133961|P49757-7|NUMB;nc|ENSG00000133961|P49757-8|NUMB;nc|ENSG00000133961|P49757-9|NUMB	45.97224482568171	0.3502073465782774	4				NaN	NaN	0	NaN	9252	3480	12733
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12735	33.297	NaN	3516.1	30	0	1162.1	0.106			+	45950	VASILSQLG	9	52	444.2636364281461	886.5127199230923	2	444.26385498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VASILSQLG_	REV__ENSG00000149150|ENST00000278426|SLC43A1;REV__nc|ENSG00000149150|O75387-2|SLC43A1	37.81151784470057	0.4459294069877048	4				NaN	NaN	0	NaN	9253	3480	12733
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12736	33.299	NaN	2289.1	30	0	342.59	0.035	+			32389	QVCDVVLNH	9	59	513.7559545188583	NaN	0	513.75634765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QVCDVVLNH_	ENSG00000050327|ENST00000056217|ARHGEF5;nc|ENSG00000050327|Q12774-2|ARHGEF5	49.44154591367651	0.21054156626303966	4				NaN	NaN	0	NaN	9254	3480	12733
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12754	33.337	NaN	2522.4	30	0	858.14	0.214	+			32086	QSESEDTLP	9	45	503.22072920692295	1004.4269054806459	2	503.22100830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QSESEDTLP_	ENSG00000116095|ENST00000234453|PLEKHA3	27.882242232435846	0.5426732730940306	4				NaN	NaN	0	NaN	9269	3483	12753
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12755	33.34	NaN	3991.7	30	0	382.93	0.106	+			36474	SEVSKIVTV	9	69	481.28199576799113	960.5494386027823	2	481.28167724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEVSKIVTV_	ENSG00000163535|ENST00000357799|SGO2;nc|ENSG00000163535|Q562F6-2|SGO2	75.04331003522576	0.118981335847003	4				NaN	NaN	0	NaN	9270	3483	12753
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12756	33.342	NaN	3892.4	30	0	730.95	0.106	+			27108	MANGAVIHL	9	55	471.2471743845699	940.4797958359399	2	471.24713134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))ANGAVIHL_	ENSG00000099995|ENST00000215793|SF3A1;nc|ENSG00000099995|Q15459-2|SF3A1	71.37791200682192	0.13483053934309522	4				NaN	NaN	0	NaN	9271	3483	12753
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12757	33.344	NaN	2135	30	0	722.6	0.106	+			7800	DPHVLLAVA	9	43	467.7714315247777	933.5283101163554	2	467.7708740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DPHVLLAVA_	ENSG00000101161|ENST00000266079|PRPF6;nc|ENSG00000101161|O94906-2|PRPF6	25.450171626174864	0.5654022654467333	4				NaN	NaN	0	NaN	9272	3483	12753
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12758	33.346	NaN	1089.5	30	0	155.23	0.035	+			17202	HVDDMPNAL	9	50	506.2325134277344	NaN	0	506.2325134277344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HVDDMPNAL_	ENSG00000188536|ENST00000251595|HBA2;ENSG00000206172|ENST00000320868|HBA1;ENST00000487791.1_1_16:226802-227261:+|nuORF	27.882242232435846	0.3367954786602879	4				NaN	NaN	0	NaN	9273	3483	12753
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12773	33.383	NaN	6599.4	30	0	835.99	0.214	+			39767	STIVPVTPR	9	70	485.28927637466484	NaN	0	485.28985595703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STIVPVTPR_	ENST00000564397.5_1_16:5075481-5078139:-|nuORF	40.77816245573522	0.2702456086868081	4				NaN	NaN	0	NaN	9285	3486	12772
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12774	33.387	NaN	9436.7	30	0	3317.1	0.106				-1	 	0	58	472.9206951647998	1415.7402560945993	3	472.9210205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9286	3486	12772
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12775	33.389	NaN	1294.1	30	0	141.46	0.106	+			17294	IADIFVKKG	9	57	495.80281333222575	989.5910737312515	2	495.80267333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IADIFVKKG_	ENSG00000180263|ENST00000343958|FGD6;ENST00000451107.3_1_12:95475298-95611245:-|nuORF;nc|ENSG00000180263|Q6ZV73-2|FGD6	53.351449002276354	0.2690372970092375	4				NaN	NaN	0	NaN	9287	3486	12772
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12776	33.391	NaN	3578.2	30	0	1145.7	0.106	+			44954	TVAVPLVGK	9	46	442.2846312908478	882.5547096484956	2	442.2842102050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TVAVPLVGK_	ENSG00000136986|ENST00000259512|DERL1;nc|ENSG00000136986|Q9BUN8-2|DERL1	66.42927471994793	0.16001998865088202	4				NaN	NaN	0	NaN	9288	3486	12772
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12777	33.392	NaN	966.89	30	0	109.19	0.035			+	29857	PLELWCHF	8	44	522.752083420556	NaN	0	522.7528686523438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PLELWCHF_	REV__ENSG00000198753|ENST00000361971|PLXNB3;REV__nc|ENSG00000198753|Q9ULL4-2|PLXNB3;REV__PLXNB3|p.G1176Afs*22|1|0.15|ENSG00000198753|chrX:153774191-153774191|G/-|frameshift_variant;REV__PLXNB3|p.L1091Cfs*36|1|0.53|ENSG00000198753|chrX:153773699-153773699|G/-|frameshift_variant;REV__PLXNB3|p.V1655Cfs*7|1|0.56|ENSG00000198753|chrX:153777236-153777236|G/-|frameshift_variant	29.841539824830324	1.7418937515398478	4				NaN	NaN	0	NaN	9289	3486	12772
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12794	33.428	NaN	26765	30	0	6730.2	0.214	+			36732	SGVSLAALK	9	68	423.25816092584574	844.5017689184915	2	423.2579345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SGVSLAALK_	ENSG00000124575|ENST00000244534|H1-3;ENSG00000168298|ENST00000304218|H1-4;ENSG00000187837|ENST00000343677|H1-2	145.15565482312357	0.00806134135205793	4				NaN	NaN	0	NaN	9303	3489	12793
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12795	33.432	NaN	2529.9	30	0	455.38	0.106	+			9524	ELALAKKQ	8	50	450.7792062034036	899.5438594736072	2	450.7791442871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ELALAKKQ_	ENSG00000163263|ENST00000368525|CFAP141	58.78195531508484	0.5138399468736706	4				NaN	NaN	0	NaN	9304	3489	12793
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12796	33.434	NaN	1729.5	30	0	230.46	0.106				-1	LLCDFFQNTCK	11	64	463.55033301483184	1387.6291696446956	3	463.5507507324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LLCDFFQNTC(Carbamidomethyl (C))K_	ENST00000254908.10_1_5:134296357-134296411:+|nuORF	25.125986553469783	0.7262400895305658	4				NaN	NaN	0	NaN	9305	3489	12793
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12797	33.435	NaN	1248.4	30	0	362.72	0.106	+			47070	VLIDSAIGK	9	46	458.2791298621766	914.5437067911532	2	458.27880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VLIDSAIGK_	ALG8|p.V512G|1|0.34|ENSG00000159063|chr11:78101010-78101010|A/C|missense_variant;ENSG00000159063|ENST00000299626|ALG8	40.77816245573522	0.41113185337114944	4				NaN	NaN	0	NaN	9306	3489	12793
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12798	33.437	NaN	585.59	30	0	77.55	0.036	+			10400	EVEPGVHLGR	10	35	546.795166015625	NaN	0	546.795166015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EVEPGVHLGR_	ENSG00000143398|ENST00000368888|PIP5K1A;nc|ENSG00000143398|Q99755-3|PIP5K1A;nc|ENSG00000143398|Q99755-4|PIP5K1A	15.641811463095205	0.4201028297492154	4				NaN	NaN	0	NaN	9307	3489	12793
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12815	33.474	NaN	12819	30	0	3800.3	0.214	+			37360	SLFGSPVAK	9	59	453.25802356951004	904.5014942058201	2	453.2580871582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLFGSPVAK_	ENSG00000186260|ENST00000571589|MRTFB;nc|ENSG00000186260|Q9ULH7-4|MRTFB;nc|ENSG00000186260|Q9ULH7|MRTFB	56.43379154798735	0.2433427591689151	4				NaN	NaN	0	NaN	9321	3492	12814
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12816	33.477	NaN	2137.1	30	0	157	0.106			+	10366	ETYGLIGKL	9	58	497.28442674312754	992.5543005530551	2	497.2841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ETYGLIGKL_	REV__ENSG00000111640|ENST00000229239|GAPDH;REV__ENST00000452570.1_1_X:39646388-39646742:-|nuORF;REV__ENST00000466525.1_1_12:6646524-6647333:+|nuORF;REV__nc|ENSG00000111640|P04406-2|GAPDH	47.657333605630114	0.33044192980041115	4				NaN	NaN	0	NaN	9322	3492	12814
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12817	33.479	NaN	1001.8	30	0	97.62	0.106	+			25551	LPVSAIRSGY	10	45	531.8016143660617	NaN	0	531.8015747070312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LPVSAIRSGY_	ENSG00000149782|ENST00000279230|PLCB3;nc|ENSG00000149782|Q01970-2|PLCB3;PLCB3|p.R918Afs*95|5|0.32|ENSG00000149782|chr11:64265045-64265045|C/-|frameshift_variant	54.722347961057174	0.27574710963839943	4				NaN	NaN	0	NaN	9323	3492	12814
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12818	33.481	NaN	1054.2	30	0	156.6	0.106	+			32142	QSNGPIIYY	9	46	527.7661257166444	NaN	0	527.7661743164062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QSNGPIIYY_	ENSG00000042781|ENST00000307340|USH2A;nc|ENSG00000042781|O75445-3|USH2A;USH2A|p.E5096Gfs*82|1|0.44|ENSG00000042781|chr1:215634469-215634470|-/C|frameshift_variant;USH2A|p.T3753Lfs*31|1|0.37|ENSG00000042781|chr1:215758727-215758727|T/-|frameshift_variant	27.882242232435846	0.3367954786602879	4				NaN	NaN	0	NaN	9324	3492	12814
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12819	33.483	NaN	1981.9	30	0	1086.4	0.106			+	17737	IEPRLFSNEGA	11	43	616.8160452444812	1231.6175375557623	2	616.81689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IEPRLFSNEGA_	REV__ENSG00000167077|ENST00000401548|MEI1;REV__nc|ENSG00000167077|Q5TIA1-2|MEI1;REV__nc|ENSG00000167077|Q5TIA1-3|MEI1;REV__nc|ENSG00000167077|Q5TIA1-5|MEI1;REV__nc|ENSG00000167077|Q5TIA1-7|MEI1	45.02220120713402	0.4892240028381124	4				NaN	NaN	0	NaN	9325	3492	12814
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12820	33.485	NaN	706.97	30	0	61.747	0.037	+			16513	HEVEDVIIKC	10	40	592.8023414200355	NaN	0	592.8026733398438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HEVEDVIIKC_	ENSG00000005007|ENST00000262803|UPF1;ENST00000594243.1_1_19:18965730-18966052:+|nuORF;nc|ENSG00000005007|Q92900|UPF1	51.19269402634007	0.2980620950593832	4				NaN	NaN	0	NaN	9326	3492	12814
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12836	33.519	NaN	48813	30	0	22343	0.214	+			32436	QVIGVVLQK	9	80	492.31606839825963	982.6175838633193	2	492.31585693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QVIGVVLQK_	ENST00000297857.3_1_8:124268339-124279533:-|nuORF	176.41073772950895	0.0016726359177844747	4				NaN	NaN	0	NaN	9339	3495	12835
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12837	33.522	NaN	3159.9	30	0	1201.4	0.106	+			31777	QPIDSIRGY	9	57	524.7745390197956	1047.5345251063911	2	524.7757568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QPIDSIRGY_	ANO10|p.R285Gfs*49|1|0.15|ENSG00000160746|chr3:43577001-43577001|G/-|frameshift_variant;ENSG00000160746|ENST00000292246|ANO10;nc|ENSG00000160746|Q9NW15-3|ANO10;nc|ENSG00000160746|Q9NW15-4|ANO10;nc|ENSG00000160746|Q9NW15-5|ANO10	39.252832667884924	0.4290233611298554	4				NaN	NaN	0	NaN	9340	3495	12835
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12838	33.524	NaN	1794.2	30	0	206.35	0.035	+			28913	NQSREVEM	8	57	496.72877324377464	991.4429935543493	2	496.7284851074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NQSREVEM_	ENSG00000161640|ENST00000447370|SIGLEC11;nc|ENSG00000161640|Q96RL6-2|SIGLEC11;SIGLEC11|p.S508Afs*11|1|0.32|ENSG00000161640|chr19:49958413-49958413|G/-|frameshift_variant	49.44154591367651	0.597725784090933	4				NaN	NaN	0	NaN	9341	3495	12835
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12853	33.556	NaN	6636.6	30	0	803.68	0.214			+	21123	KKSFSIKK	8	70	483.31076050756707	964.6069680819342	2	483.3103942871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KKSFSIKK_	REV__ENSG00000163629|ENST00000411767|PTPN13;REV__nc|ENSG00000163629|Q12923-2|PTPN13;REV__nc|ENSG00000163629|Q12923-3|PTPN13;REV__nc|ENSG00000163629|Q12923-4|PTPN13;REV__PTPN13|p.K1535Sfs*16|1|0.38|ENSG00000163629|chr4:86769879-86769879|A/-|frameshift_variant;REV__PTPN13|p.N1374Mfs*7|1|0.15|ENSG00000163629|chr4:86764692-86764692|A/-|frameshift_variant;REV__PTPN13|p.T2330Qfs*13|1|0.12|ENSG00000163629|chr4:86807799-86807799|A/-|frameshift_variant	47.657333605630114	0.6087971902037268	4				NaN	NaN	0	NaN	9353	3498	12852
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12854	33.56	NaN	3333.2	30	0	526.75	0.106	+			28815	NPLAATHEF	9	57	500.2481720363845	998.481791139569	2	500.2482604980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NPLAATHEF_	ENSG00000100403|ENST00000352645|ZC3H7B;ZC3H7B|p.G531Vfs*13|1|0.19|ENSG00000100403|chr22:41346130-41346130|G/-|frameshift_variant	87.69643885390035	0.07135982304947239	4				NaN	NaN	0	NaN	9354	3498	12852
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12855	33.562	NaN	2106.1	30	0	257.84	0.106	+			19822	KEDLRVLM	8	63	502.28360918182557	1002.5526654304512	2	502.2833251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEDLRVLM_	ENSG00000197747|ENST00000368811|S100A10;ENST00000478348.1_1_1:151957748-151958706:-|nuORF;ENST00000478574.5_1_1:151956596-151958706:-|nuORF	44.116797842482775	0.6307669463330267	4				NaN	NaN	0	NaN	9355	3498	12852
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12856	33.564	NaN	3090	30	0	519.97	0.106	+			20262	KENDVTAVL	9	65	494.7698792282653	987.5252055233307	2	495.274658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KENDVTAVL_	ENSG00000233757|ENST00000425953|ZNF892	35.61828744233558	0.47037581924408073	4				NaN	NaN	0	NaN	9356	3498	12852
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12857	33.565	NaN	1726.9	30	0	165.84	0.037	+			33423	RIIEETLALK	10	67	593.363227252664	1184.711901572128	2	593.363037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RIIEETLALK_	ENSG00000163466|ENST00000315717|ARPC2;ENST00000465395.5_1_2:219082193-219103574:+|nuORF;ENST00000489598.5_1_2:219082193-219099125:+|nuORF;ENST00000491780.5_1_2:219082193-219100082:+|nuORF	45.908116695636124	0.4947047446361497	4				NaN	NaN	0	NaN	9357	3498	12852
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12874	33.601	NaN	26362	30	0	9750.4	0.214	+			4658	ATLQLRQQK	9	46	362.5522703042435	1084.6349815129306	3	362.5524597167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATLQLRQQK_	CCDC168|p.G4714Rfs*2|1|0.22|ENSG00000175820|chr13:102736557-102736558|-/T|frameshift_variant;CCDC168|p.G6141Lfs*25|1|0.03|ENSG00000175820|chr13:102732276-102732277|-/AGGAAAAATCACCAAACACTAG|frameshift_variant;CCDC168|p.K5937Nfs*10|1|0.37|ENSG00000175820|chr13:102732886-102732886|T/-|frameshift_variant;CCDC168|p.K6236Nfs*3|1|0.42|ENSG00000175820|chr13:102731989-102731989|T/-|frameshift_variant;CCDC168|p.L5048Ifs*6|1|0.12|ENSG00000175820|chr13:102735555-102735556|-/T|frameshift_variant;CCDC168|p.L5234*|1|0.12|ENSG00000175820|chr13:102735001-102735001|A/-|frameshift_variant;CCDC168|p.M5025Cfs*8|1|0.29|ENSG00000175820|chr13:102735624-102735624|T/-|frameshift_variant;CCDC168|p.T4543Lfs*5|1|0.1|ENSG00000175820|chr13:102737070-102737070|T/-|frameshift_variant;ENSG00000175820|ENST00000322527|CCDC168	27.882242232435846	0.5426732730940306	4				NaN	NaN	0	NaN	9371	3501	12873
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12875	33.605	NaN	5800.5	30	0	998.65	0.106	+			25755	LSADVVSLK	9	60	466.276521132419	930.5384893316381	2	466.27630615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSADVVSLK_	NFIL3|p.E443D|1|0.5|ENSG00000165030|chr9:91409406-91409406|C/A|missense_variant	49.44154591367651	0.3095138337212152	4				NaN	NaN	0	NaN	9372	3501	12873
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12876	33.607	NaN	6340	30	0	760.36	0.106	+			44870	TTVESLIQK	9	68	509.79243709670664	1017.5703212602133	2	509.79302978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TTVESLIQK_	ENSG00000157107|ENST00000430046|FCHO2;nc|ENSG00000157107|Q0JRZ9-2|FCHO2;nc|ENSG00000157107|Q0JRZ9-3|FCHO2	162.25246889848123	0.0040893836092247005	4				NaN	NaN	0	NaN	9373	3501	12873
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12877	33.608	NaN	2665.9	30	0	859.88	0.035	+			26571	LTTEVHPEL	9	58	519.776776319745	1037.5389997062898	2	519.77783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LTTEVHPEL_	ENSG00000125991|ENST00000348547|ERGIC3;ENST00000486268.5_1_20:34129846-34130758:+|nuORF;nc|ENSG00000125991|Q9Y282-2|ERGIC3;nc|ENSG00000125991|Q9Y282-3|ERGIC3	56.72105179125745	0.24094814563026265	4				NaN	NaN	0	NaN	9374	3501	12873
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12894	33.644	NaN	6955.9	30	0	3351	0.214	+			30850	QEGDKILSV	9	66	494.7698792282653	987.5252055233307	2	494.7688293457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QEGDKILSV_	ENSG00000213463|ENST00000256366|SYNJ2BP	69.6276240434122	0.14239879520340665	4				NaN	NaN	0	NaN	9388	3504	12893
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12895	33.647	NaN	1628.6	30	0	284.96	0.037			+	-1	IILSICCYL	9	27	366.52906290152623	1096.5653593047787	3	366.5295104980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_IILSIC(Carbamidomethyl (C))CYL_	REV__ENST00000320892.10_1_2:7180578-7180827:+|nuORF	35.61828744233558	0.47037581924408073	4				NaN	NaN	0	NaN	9389	3504	12893
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12909	33.677	NaN	3235.9	30	0	622.94	0.214	+			17555	IDVKVTSM	8	58	446.7438599689854	891.4731670047709	2	446.7439270019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IDVKVTSM_	ENSG00000151176|ENST00000280800|PLBD2;nc|ENSG00000151176|Q8NHP8-2|PLBD2	112.41091882917199	0.2438316832735406	4				NaN	NaN	0	NaN	9400	3507	12908
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12910	33.681	NaN	3398.2	30	0	381.46	0.106			+	48183	VTAEAAKPQ	9	55	457.7507933083891	913.4870336835783	2	457.7510070800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTAEAAKPQ_	REV__ENSG00000116580|ENST00000368331|GON4L;REV__ENST00000473267.1_1_1:155721749-155721992:-|nuORF;REV__nc|ENSG00000116580|Q3T8J9-3|GON4L	84.9155231211612	0.07920012719736333	4				NaN	NaN	0	NaN	9401	3507	12908
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12911	33.683	NaN	2339.2	30	0	352.42	0.106	+			48861	VVCVEGIVTK	10	57	552.3106448453949	1102.6067367575897	2	552.3109130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_VVC(Carbamidomethyl (C))VEGIVTK_	ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3	78.26377905018397	0.20980573808910843	4				NaN	NaN	0	NaN	9402	3507	12908
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12912	33.685	NaN	4243.3	30	0	2584.9	0.039	+			12086	GAAPIGIPR	9	44	426.25655722761616	NaN	0	425.9225158691406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GAAPIGIPR_	ENSG00000100968|ENST00000250373|NFATC4;ENST00000440487.6_1_14:24834883-24840960:+|nuORF;ENST00000554655.5_1_14:24837525-24841293:+|nuORF;ENST00000556302.5_1_14:24838518-24843333:+|nuORF;ENST00000556957.5_1_14:24836547-24843333:+|nuORF;ENST00000557028.5_1_14:24837525-24843333:+|nuORF;nc|ENSG00000100968|Q14934-10|NFATC4;nc|ENSG00000100968|Q14934-11|NFATC4;nc|ENSG00000100968|Q14934-14|NFATC4;nc|ENSG00000100968|Q14934-15|NFATC4;nc|ENSG00000100968|Q14934-16|NFATC4;nc|ENSG00000100968|Q14934-17|NFATC4;nc|ENSG00000100968|Q14934-2|NFATC4;nc|ENSG00000100968|Q14934-3|NFATC4;nc|ENSG00000100968|Q14934-4|NFATC4;nc|ENSG00000100968|Q14934-5|NFATC4;nc|ENSG00000100968|Q14934-6|NFATC4;nc|ENSG00000100968|Q14934-7|NFATC4;nc|ENSG00000100968|Q14934-8|NFATC4;nc|ENSG00000100968|Q14934-9|NFATC4;NFATC4|p.A853Gfs*31|1|0.47|ENSG00000100968|chr14:24376789-24376790|-/G|frameshift_variant;NFATC4|p.F811Lfs*13|1|0.48|ENSG00000100968|chr14:24376662-24376663|-/C|frameshift_variant;NFATC4|p.Y722Tfs*122|1|0.43|ENSG00000100968|chr14:24376395-24376395|C/-|frameshift_variant	44.53106598305862	0.24438232876904814	4				NaN	NaN	0	NaN	9403	3507	12908
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12925	33.712	NaN	3482.2	30	0	393.8	0.142	+			27665	MPSSAVRVL	9	56	480.2703851989242	958.5262174646484	2	480.269775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MPSSAVRVL_	ENSG00000144451|ENST00000331683|SPAG16;ENST00000413312.5_1_2:214149168-214161993:+|nuORF;nc|ENSG00000144451|Q8N0X2-4|SPAG16;nc|ENSG00000144451|Q8N0X2-5|SPAG16;SPAG16|p.F348Lfs*8|1|0.2|ENSG00000144451|chr2:213490060-213490060|T/-|frameshift_variant;SPAG16|p.N166Rfs*6|1|0.15|ENSG00000144451|chr2:213317316-213317317|-/GGGTTTATATC|frameshift_variant;SPAG16|p.N207Tfs*3|1|0.37|ENSG00000144451|chr2:213340240-213340240|A/-|frameshift_variant	80.45461616416974	0.09558281504443908	4				NaN	NaN	0	NaN	9413	3510	12924
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12941	33.747	NaN	5529	30	0	1986.3	0.214	+			28601	NKPLVLSL	8	59	442.2846312908478	882.5547096484956	2	442.2840270996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NKPLVLSL_	ENSG00000180999|ENST00000367727|C1orf105	42.47446043378293	0.6409579893742323	4				NaN	NaN	0	NaN	9426	3513	12940
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12942	33.75	NaN	6604.8	30	0	2888.5	0.106	+			31755	QPESVVNTM	9	59	502.73936724350926	1003.4641815538185	2	503.2413024902344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QPESVVNTM_	ENSG00000198380|ENST00000357308|GFPT1;nc|ENSG00000198380|Q06210-2|GFPT1	70.8162118820467	0.13725933411854815	4				NaN	NaN	0	NaN	9427	3513	12940
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12943	33.752	NaN	23454	30	0	15750	0.106	+			41321	SVLQGLLKK	9	50	329.21818959853204	984.6327393957961	3	329.2182922363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVLQGLLKK_	ENSG00000108175|ENST00000334512|ZMIZ1;ENSG00000122515|ENST00000309315|ZMIZ2;ENST00000463056.5_1_7:44799906-44807219:+|nuORF;ENST00000478045.5_1_7:44801192-44807219:+|nuORF;ENST00000480964.5_1_7:44801441-44805210:+|nuORF;nc|ENSG00000108175|Q9ULJ6-3|ZMIZ1;nc|ENSG00000122515|Q8NF64-2|ZMIZ2;nc|ENSG00000122515|Q8NF64-3|ZMIZ2	40.77816245573522	0.41113185337114944	4				NaN	NaN	0	NaN	9428	3513	12940
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12944	33.754	NaN	5537.1	30	0	2610.5	0.106	+			32080	QSCYIIISK	9	59	556.2947530672338	1110.5749532012676	2	556.2952880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_QSC(Carbamidomethyl (C))YIIISK_	ENSG00000158987|ENST00000509018|RAPGEF6;nc|ENSG00000158987|Q8TEU7-2|RAPGEF6;nc|ENSG00000158987|Q8TEU7-3|RAPGEF6;nc|ENSG00000158987|Q8TEU7-4|RAPGEF6;nc|ENSG00000158987|Q8TEU7-5|RAPGEF6;nc|ENSG00000158987|Q8TEU7-6|RAPGEF6;RAPGEF6|p.L1388*|1|0.25|ENSG00000158987|chr5:131431161-131431161|A/-|frameshift_variant;RAPGEF6|p.N832Ifs*17|2|0.4|ENSG00000158987|chr5:131462074-131462074|T/-|frameshift_variant	46.45678178249821	0.34452392205506005	4				NaN	NaN	0	NaN	9429	3513	12940
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12945	33.756	NaN	2971.1	30	0	947.49	0.106	+			44980	TVCLTLTAK	9	53	475.27269561651127	948.5308382998226	2	475.2723083496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TVCLTLTAK_	ATP1A3|p.I582Tfs*73|1|0.04|ENSG00000105409|chr19:41978212-41978212|A/-|frameshift_variant;ATP1A4|p.E557Nfs*4|1|0.1|ENSG00000132681|chr1:160171424-160171424|G/-|frameshift_variant;ATP1A4|p.P701Lfs*20|1|0.3|ENSG00000132681|chr1:160174218-160174218|C/-|frameshift_variant;ENSG00000018625|ENST00000361216|ATP1A2;ENSG00000105409|ENST00000648268|ATP1A3;ENSG00000132681|ENST00000368081|ATP1A4;ENSG00000163399|ENST00000295598|ATP1A1;ENST00000472488.5_1_1:160085570-160106822:+|nuORF;nc|ENSG00000105409|P13637-2|ATP1A3;nc|ENSG00000105409|P13637-3|ATP1A3;nc|ENSG00000163399|P05023-2|ATP1A1;nc|ENSG00000163399|P05023-3|ATP1A1;nc|ENSG00000163399|P05023-4|ATP1A1	65.46538089061403	0.16805504838372562	4				NaN	NaN	0	NaN	9430	3513	12940
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12946	33.758	NaN	1099.2	30	0	199.61	0.106	+			41050	SVIELTCTK	9	40	497.26777206511275	992.5209911970255	2	497.26727294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVIELTCTK_	ENSG00000197081|ENST00000356956|IGF2R;IGF2R|p.A2088T|1|0.28|ENSG00000197081|chr6:160088089-160088089|G/A|missense_variant;IGF2R|p.D2163Tfs*2|1|0.16|ENSG00000197081|chr6:160089932-160089932|G/-|frameshift_variant;IGF2R|p.G2426Efs*10|1|0.25|ENSG00000197081|chr6:160104882-160104882|G/-|frameshift_variant	56.43379154798735	0.2433427591689151	4				NaN	NaN	0	NaN	9431	3513	12940
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12947	33.76	NaN	1872.3	30	0	350.42	0.036	+			33961	RSDLKVIVM	9	51	530.8129207637576	1059.611288594315	2	530.8128662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RSDLKVIVM_	ENSG00000109606|ENST00000336812|DHX15	56.43379154798735	0.2433427591689151	4				NaN	NaN	0	NaN	9432	3513	12940
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12966	33.794	NaN	6165.6	30	0	1011.9	0.214	+			7157	DAFKASVY	8	62	450.7267701050481	899.4389872768962	2	450.72674560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DAFKASVY_	ENSG00000163029|ENST00000448223|SMC6;nc|ENSG00000163029|Q96SB8-2|SMC6;SMC6|p.D983Lfs*3|1|0.06|ENSG00000163029|chr2:17670539-17670540|-/AG|frameshift_variant	90.36981228632155	0.27635063874291205	4				NaN	NaN	0	NaN	9448	3516	12965
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12967	33.797	NaN	1667.9	30	0	354.32	0.106			+	-1	LPYSMLMPI	9	55	540.7771797741644	1079.5398066151288	2	540.7784423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LPYSMLM(Oxidation (M))PI_	REV__nc|ENSG00000198848|P23141-3|CES1	57.81127852772723	0.2318599694398087	4				NaN	NaN	0	NaN	9449	3516	12965
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12968	33.799	NaN	2503.8	30	0	749.81	0.106			+	26507	LTNELDIKEWR	11	47	472.9206951647998	1415.7402560945993	3	472.9206848144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LTNELDIKEWR_	REV__CCDC6|p.R197W|1|0.14|ENSG00000108091|chr10:59814749-59814749|G/A|missense_variant	16.52985593315525	0.793090074565524	4				NaN	NaN	0	NaN	9450	3516	12965
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12969	33.801	NaN	1983.1	30	0	267.63	0.106			+	31740	QPAPGPQEPL	10	52	517.269362582552	1032.524172231904	2	517.2706298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QPAPGPQEPL_	REV__ENSG00000171872|ENST00000372299|KLF17	58.22992032128504	0.38193887838457763	4				NaN	NaN	0	NaN	9451	3516	12965
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12970	33.803	NaN	1236.5	30	0	202.21	0.032			+	20794	KIAIGLGK	8	54	400.27357195977675	798.5325909863535	2	400.2733154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KIAIGLGK_	REV__ENSG00000140157|ENST00000337451|NIPA2;REV__ENSG00000163293|ENST00000295461|NIPAL1;REV__nc|ENSG00000140157|Q8N8Q9-2|NIPA2;REV__NIPAL1|p.S365Nfs*17|1|0.05|ENSG00000163293|chr4:48036032-48036033|-/ATAAGATG|frameshift_variant	50.0245360154114	0.5941082100236891	4				NaN	NaN	0	NaN	9452	3516	12965
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12982	33.826	NaN	9191.5	30	0	1926.4	0.214	+			42558	TASESSYQL	9	67	493.2275770930231	984.4406012528462	2	493.2271728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TASESSYQL_	ENSG00000137501|ENST00000359152|SYTL2;nc|ENSG00000137501|Q9HCH5-12|SYTL2;nc|ENSG00000137501|Q9HCH5-13|SYTL2;nc|ENSG00000137501|Q9HCH5-14|SYTL2;nc|ENSG00000137501|Q9HCH5-2|SYTL2;nc|ENSG00000137501|Q9HCH5-7|SYTL2;nc|ENSG00000137501|Q9HCH5-8|SYTL2;nc|ENSG00000137501|Q9HCH5-9|SYTL2;nc|ENSG00000137501|Q9HCH5|SYTL2;SYTL2|p.Q663Tfs*35|1|0.14|ENSG00000137501|chr11:85709344-85709345|-/T|frameshift_variant	98.58198989935565	0.04066992115528678	4				NaN	NaN	0	NaN	9461	3519	12981
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12983	33.83	NaN	2057	30	0	469.07	0.106			+	16955	HPPLITDL	8	55	453.25802356951004	904.5014942058201	2	453.2579040527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HPPLITDL_	REV__EEF1A2|p.T239Hfs*50|1|0.26|ENSG00000101210|chr20:63493194-63493195|-/G|frameshift_variant	44.53106598305862	0.628196326904373	4				NaN	NaN	0	NaN	9462	3519	12981
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12984	33.832	NaN	866.43	30	0	158.99	0.036				-1	MVANLLYEK	9	44	548.7894791593551	NaN	0	548.7894897460938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))VANLLYEK_	ENSG00000277791|ENST00000619426|PSMB3	37.81151784470057	0.28666463014928195	4				NaN	NaN	0	NaN	9463	3519	12981
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12998	33.861	NaN	7096.7	30	0	770.5	0.214			+	49417	VVVAVGLLGG	10	56	442.2846312908478	882.5547096484956	2	442.2892761230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVVAVGLLGG_	REV__ENST00000282096.8_1_11:14665308-14793517:+|nuORF	77.94384346573518	0.21241958424364343	4				NaN	NaN	0	NaN	9474	3522	12997
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12999	33.864	NaN	878.55	30	0	56.91	0.106				-1	 	0	46	505.30559652425	504.29832005765	1	505.3058166503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9475	3522	12997
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13000	33.866	NaN	3535	30	0	544.71	0.106	+			48858	VVCGTPLFK	9	68	510.7806858675051	1019.5468188018102	2	510.78179931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_VVC(Carbamidomethyl (C))GTPLFK_	ENSG00000174099|ENST00000308259|MSRB3;nc|ENSG00000174099|Q8IXL7|MSRB3	54.776311868738084	0.25715957988447635	4				NaN	NaN	0	NaN	9476	3522	12997
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13001	33.868	NaN	888.44	30	0	157.85	0.106			+	36534	SFGSSKKI	8	38	427.2427548842926	852.4709568353852	2	427.2424011230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SFGSSKKI_	REV__ENSG00000145833|ENST00000452510|DDX46;REV__nc|ENSG00000145833|Q7L014|DDX46	33.51558372728122	0.7005509609380386	4				NaN	NaN	0	NaN	9477	3522	12997
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13002	33.87	NaN	814.58	30	0	104.51	0.034	+			7579	DIKTTTTM	8	48	455.7313537597656	NaN	0	455.7313537597656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DIKTTTTM_	ENST00000550106.5_1_12:95612049-95636028:+|nuORF	33.51558372728122	1.7418937515398478	4				NaN	NaN	0	NaN	9478	3522	12997
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13017	33.901	NaN	33154	30	0	9797.4	0.214	+			265	AAMPGFIAK	9	70	453.2490084694056	904.4834640056113	2	453.2493896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAMPGFIAK_	ENSG00000122008|ENST00000241436|POLK;ENST00000506928.5_1_5:74842847-74879138:+|nuORF;ENST00000508867.5_1_5:74842847-74877278:+|nuORF;nc|ENSG00000122008|Q9UBT6-2|POLK;nc|ENSG00000122008|Q9UBT6-3|POLK;nc|ENSG00000122008|Q9UBT6-4|POLK;nc|ENSG00000122008|Q9UBT6-5|POLK;nc|ENSG00000122008|Q9UBT6-6|POLK;nc|ENSG00000122008|Q9UBT6-7|POLK;nc|ENSG00000122008|Q9UBT6-8|POLK;POLK|p.K571Nfs*18|1|0.29|ENSG00000122008|chr5:75596401-75596401|A/-|frameshift_variant	97.47269410471826	0.04379738608259218	4				NaN	NaN	0	NaN	9490	3525	13016
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13018	33.905	NaN	10606	30	0	2306	0.106	+			5918	AVLEADFAK	9	70	482.26014125878913	962.5057295843783	2	482.2609558105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVLEADFAK_	ENSG00000136930|ENST00000259457|PSMB7;ENST00000498485.5_1_9:127146904-127177393:-|nuORF;nc|ENSG00000136930|Q99436-2|PSMB7	110.11987700582712	0.028875675806141952	4				NaN	NaN	0	NaN	9491	3525	13016
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13019	33.907	NaN	11705	30	0	4306.4	0.106	+			45435	TVYEEMMAK	9	73	551.2510656837268	1100.4875784342535	2	551.2523803710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVYEEMMAK_	ENSG00000144659|ENST00000650617|SLC25A38;SLC25A38|p.G301V|1|0.09|ENSG00000144659|chr3:39396507-39396507|G/T|missense_variant	98.58198989935565	0.04066992115528678	4				NaN	NaN	0	NaN	9492	3525	13016
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13020	33.908	NaN	3393.7	30	0	488.64	0.106	+			28409	NESSVLHTL	9	58	500.2589879528527	998.5034229725054	2	500.25897216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NESSVLHTL_	ENSG00000196535|ENST00000527372|MYO18A;nc|ENSG00000196535|Q92614-2|MYO18A;nc|ENSG00000196535|Q92614-3|MYO18A;nc|ENSG00000196535|Q92614-4|MYO18A	132.757866228626	0.013877640931359021	4				NaN	NaN	0	NaN	9493	3525	13016
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13021	33.91	NaN	1448	30	0	375.66	0.106	+			37278	SLAHVVPAY	9	37	478.76329490486677	955.5120368765336	2	478.7633056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SLAHVVPAY_	ENST00000466012.5_1_2:219142848-219157252:-|nuORF	42.47446043378293	0.39123495718708534	4				NaN	NaN	0	NaN	9494	3525	13016
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13022	33.912	NaN	1185.7	30	0	71.852	0.035	+			25288	LNSVYIGPAG	10	52	495.76799460288	989.52143627256	2	495.767333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LNSVYIGPAG_	ENSG00000104903|ENST00000264824|LYL1	45.97224482568171	0.49411383603842696	4				NaN	NaN	0	NaN	9495	3525	13016
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13038	33.945	NaN	3010.6	30	0	1158.8	0.214	+			22846	KVIGVNLIQ	9	63	492.31606839825963	982.6175838633193	2	492.31591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVIGVNLIQ_	ENST00000526677.1_1_11:59948933-59950490:-|nuORF	53.351449002276354	0.2690372970092375	4				NaN	NaN	0	NaN	9508	3528	13037
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13039	33.949	NaN	2744	30	0	538.89	0.106	+			24769	LICDVALGK	9	62	494.77843727455297	987.542321615906	2	494.7780456542969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LIC(Carbamidomethyl (C))DVALGK_	ENSG00000102699|ENST00000381989|PARP4	60.11826168202944	0.21262886028301267	4				NaN	NaN	0	NaN	9509	3528	13037
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13040	33.951	NaN	2284.2	30	0	262.12	0.106			+	17622	IEILSMSK	8	56	460.75974006015247	NaN	0	460.7596130371094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IEILSMSK_	REV__ADAMTS2|p.D535Gfs*13|1|0.23|ENSG00000087116|chr5:179152171-179152172|-/G|frameshift_variant;REV__ADAMTS2|p.H646Pfs*31|1|0.46|ENSG00000087116|chr5:179137783-179137784|-/G|frameshift_variant;REV__ADAMTS2|p.L1140Pfs*24|1|0.29|ENSG00000087116|chr5:179114084-179114085|-/G|frameshift_variant;REV__ADAMTS2|p.L1140Wfs*22|1|0.07|ENSG00000087116|chr5:179114085-179114085|G/-|frameshift_variant;REV__ADAMTS2|p.L534Wfs*20|2|0.31|ENSG00000087116|chr5:179152172-179152172|G/-|frameshift_variant;REV__ADAMTS2|p.R598Pfs*24|1|0.33|ENSG00000087116|chr5:179137929-179137930|-/C|frameshift_variant;REV__ADAMTS2|p.V1075Sfs*32|1|0.38|ENSG00000087116|chr5:179114280-179114280|C/-|frameshift_variant;REV__ENSG00000087116|ENST00000251582|ADAMTS2;REV__nc|ENSG00000087116|O95450-2|ADAMTS2	60.97194046774394	1.7418937515398478	4				NaN	NaN	0	NaN	9510	3528	13037
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13041	33.953	NaN	1921	30	0	817.13	0.106	+			16855	HPEVTPLRF	9	49	548.3006923085281	1094.5868316838562	2	548.3005981445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HPEVTPLRF_	ENSG00000104884|ENST00000391945|ERCC2;ENST00000586441.1_1_19:45867568-45872241:-|nuORF;nc|ENSG00000104884|P18074-2|ERCC2	25.57405402267927	0.5642445186134241	4				NaN	NaN	0	NaN	9511	3528	13037
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13042	33.954	NaN	958.72	30	0	75.404	0.036	+			10229	ETHVGLLGEY	10	51	559.2793171557237	1116.5440813782473	2	559.2799072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ETHVGLLGEY_	ENSG00000103723|ENST00000535359|AP3B2	47.657333605630114	0.47858658696240314	4				NaN	NaN	0	NaN	9512	3528	13037
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13060	33.991	NaN	5522	30	0	913.27	0.214	+			8944	EEYPDRIM	8	55	526.7390082670146	1051.463463600829	2	526.7394409179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EEYPDRIM_	ENSG00000101162|ENST00000217133|TUBB1;ENSG00000137267|ENST00000333628|TUBB2A;ENSG00000137285|ENST00000259818|TUBB2B;ENSG00000188229|ENST00000340384|TUBB4B;ENSG00000196230|ENST00000327892|TUBB;ENSG00000258947|ENST00000315491|TUBB3;ENST00000404155.1_1_6:3177457-3179994:-|nuORF;ENST00000518096.1_1_8:30209523-30210210:+|nuORF;ENST00000604929.1_1_9:140136931-140138005:+|nuORF;nc|ENSG00000258947|Q13509-2|TUBB3;TUBB2B|p.D177Hfs*21|1|0.32|ENSG00000137285|chr6:3225559-3225560|TC/-|frameshift_variant	152.47061609516894	0.18319083952648163	4				NaN	NaN	0	NaN	9527	3531	13059
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13061	33.995	NaN	5672.5	30	0	417.91	0.106			+	24180	LEPLHELA	8	72	461.2555241688162	NaN	0	461.2554016113281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LEPLHELA_	REV__ENSG00000204033|ENST00000372113|LRIT2;REV__nc|ENSG00000204033|A6NDA9-2|LRIT2	50.0245360154114	1.7418937515398478	4				NaN	NaN	0	NaN	9528	3531	13059
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13062	33.997	NaN	2087.5	30	0	237.57	0.106	+			35849	SEDGAIHVI	9	53	470.7401213273559	939.4656897215118	2	470.7402038574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEDGAIHVI_	ENSG00000129657|ENST00000436233|SEC14L1;nc|ENSG00000129657|Q92503-2|SEC14L1;nc|ENSG00000129657|Q92503-3|SEC14L1;SEC14L1|p.G159Efs*12|1|0.17|ENSG00000129657|chr17:77193544-77193544|A/-|frameshift_variant;SEC14L1|p.I147Lfs*3|1|0.38|ENSG00000129657|chr17:77193509-77193509|A/-|frameshift_variant	106.41520541750704	0.03265588207292361	4				NaN	NaN	0	NaN	9529	3531	13059
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13063	33.999	NaN	1148.2	30	0	203.66	0.106	+			7169	DAGITTKLL	9	45	466.276521132419	930.5384893316381	2	466.276123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DAGITTKLL_	ENSG00000105926|ENST00000222644|PALS2	35.15202426646627	0.4747332964206883	4				NaN	NaN	0	NaN	9530	3531	13059
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13064	34	NaN	1128.8	30	0	175.44	0.106			+	33836	RRAGSRVP	8	48	449.76929731284787	NaN	0	449.7706298828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RRAGSRVP_	REV__ENST00000491668.1_1_3:127771425-127771617:+|nuORF	19.359975847455235	1.7418937515398478	4				NaN	NaN	0	NaN	9531	3531	13059
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13065	34.002	NaN	1459.1	30	0	201.25	0.034	+			1897	AIMKISSSL	9	53	475.27269561651127	948.5308382998226	2	475.7734680175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AIMKISSSL_	ENST00000373783.2_1_10:64565811-64565997:+|nuORF	37.15910966729921	0.4535818937225704	4				NaN	NaN	0	NaN	9532	3531	13059
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13084	34.038	NaN	3188.1	30	0	803.63	0.214	+			35477	SATETCYTY	9	53	519.7074213121872	1037.4002896911743	2	519.7078857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SATETCYTY_	ENSG00000132465|ENST00000254801|JCHAIN	111.64827973302667	0.027316110422332632	4				NaN	NaN	0	NaN	9548	3534	13083
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13085	34.041	NaN	4774.4	30	0	459.89	0.106	+			44103	TPVGLIVSH	9	62	461.7712240288987	921.5278951245974	2	461.7711181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TPVGLIVSH_	ENSG00000136718|ENST00000259239|IMP4;ENST00000460766.5_1_2:131100637-131104038:+|nuORF	116.90359126533652	0.02307425081617795	4				NaN	NaN	0	NaN	9549	3534	13083
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13086	34.043	NaN	2761.7	30	0	340.46	0.106				-1	LICDGIIQG	9	59	494.7599255515039	NaN	0	494.7599792480469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LIC(Carbamidomethyl (C))DGIIQG_	ENSG00000196415|ENST00000234347|PRTN3	51.33545320467046	0.19748963086191895	4				NaN	NaN	0	NaN	9550	3534	13083
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13087	34.045	NaN	2517.6	30	0	530.75	0.106			+	-1	RCHFVVVSF	9	40	384.19962508794066	1149.577045864022	3	384.19970703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_RC(Carbamidomethyl (C))HFVVVSF_	REV__ENSG00000006715|ENST00000310301|VPS41;REV__ENST00000490924.1_1_7:38765848-38766604:-|nuORF;REV__nc|ENSG00000006715|P49754-3|VPS41	39.252832667884924	0.4290233611298554	4				NaN	NaN	0	NaN	9551	3534	13083
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13088	34.047	NaN	1746	30	0	222.62	0.106	+			20020	KEILKEIGV	9	61	514.821044921875	NaN	0	514.821044921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEILKEIGV_	ENSG00000188342|ENST00000340473|GTF2F2	59.93077597824379	0.14961415694175798	4				NaN	NaN	0	NaN	9552	3534	13083
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13089	34.049	NaN	898.01	30	0	85.077	0.036			+	2228	ALSETLILAR	10	55	543.8302612304688	NaN	0	543.8302612304688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ALSETLILAR_	REV__sp|F5HF62|US28_HCMVMEnvelopeproteinUS28OS=Humancytomegalovirus(strainMerlin)OX=295027GN=US28PE=3SV=1	34.172542307311794	0.38797011891751465	4				NaN	NaN	0	NaN	9553	3534	13083
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13090	34.049	NaN	1234	30	0	134.69	0.139	+			29949	PMSVSVGGAF	10	55	476.2350357657914	NaN	0	476.2357482910156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PMSVSVGGAF_	ARHGEF17|p.D364V|1|0.19|ENSG00000110237|chr11:73309729-73309729|A/T|missense_variant	53.351449002276354	0.2844141321977336	4				NaN	NaN	0	NaN	9554	3534	13083
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13108	34.087	NaN	13677	30	0	1974.9	0.214	+			23477	LAEVGRVL	8	55	428.76616279265727	855.5177726521146	2	428.7657775878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LAEVGRVL_	ENSG00000010165|ENST00000361735|METTL13;METTL13|p.L636Pfs*8|1|0.12|ENSG00000010165|chr1:171796557-171796558|-/C|frameshift_variant;nc|ENSG00000010165|Q8N6R0-1|METTL13;nc|ENSG00000010165|Q8N6R0-2|METTL13;nc|ENSG00000010165|Q8N6R0-3|METTL13;nc|ENSG00000010165|Q8N6R0-4|METTL13	104.74654710444128	0.24806011021879068	4				NaN	NaN	0	NaN	9569	3537	13107
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13109	34.091	NaN	4672.7	30	0	537.34	0.106	+			31800	QPMEVQEGY	9	62	540.736472517491	1079.458392101782	2	540.7371215820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QPMEVQEGY_	ENSG00000130726|ENST00000253024|TRIM28;ENST00000601150.5_1_19:59059168-59060232:+|nuORF;nc|ENSG00000130726|Q13263-2|TRIM28	136.26810882979174	0.012230845423532208	4				NaN	NaN	0	NaN	9570	3537	13107
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13110	34.093	NaN	3298.4	30	0	414.55	0.106	+			51390	YTNGKCVIL	9	62	505.7703212564096	1009.5260895796192	2	505.7706604003906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YTNGKCVIL_	ENSG00000071127|ENST00000499869|WDR1;ENST00000509600.1_1_4:10117520-10118290:-|nuORF;ENST00000514319.5_1_4:10110004-10118075:-|nuORF;nc|ENSG00000071127|O75083-3|WDR1	79.45101966838831	0.09992237243120712	4				NaN	NaN	0	NaN	9571	3537	13107
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13111	34.095	NaN	718.26	30	0	122.08	0.106			+	-1	QLDLMVKY	8	47	513.2704467773438	NaN	0	513.2704467773438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_QLDLM(Oxidation (M))VKY_	REV__HTT|p.T1253M|1|0.07|ENSG00000197386|chr4:3160286-3160286|C/T|missense_variant	34.172542307311794	1.7418937515398478	4				NaN	NaN	0	NaN	9572	3537	13107
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13112	34.096	NaN	1786.4	30	0	235.94	0.036			+	24380	LFSLFFYM	8	60	534.2662682064333	1066.5179834796666	2	534.2675170898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LFSLFFYM_	REV__ENSG00000171496|ENST00000641027|OR1L8;REV__ENSG00000174982|ENST00000641692|OR4S2;REV__OR1L8|p.T58A|1|0.25|ENSG00000171496|chr9:122568306-122568306|T/C|missense_variant	46.76643321282427	0.6143254112625767	4				NaN	NaN	0	NaN	9573	3537	13107
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13129	34.131	NaN	1274.8	30	0	169.61	0.214	+			23795	LCLWGIAL	8	54	444.7543640136719	NaN	0	444.7543640136719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LCLWGIAL_	ENSG00000121900|ENST00000373463|TMEM54;ENST00000482771.1_1_1:33360408-33361058:-|nuORF;nc|ENSG00000121900|Q969K7-2|TMEM54;nc|ENSG00000121900|Q969K7-3|TMEM54	43.626045697637714	1.7418937515398478	4				NaN	NaN	0	NaN	9587	3540	13128
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13130	34.135	NaN	3068.8	30	0	535.15	0.106	+			28830	NPNSPSITY	9	50	496.73767289279664	991.4607928523933	2	496.7374572753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NPNSPSITY_	ENSG00000100632|ENST00000557016|ERH;ENST00000216520.6_1_14:69847257-69864987:-|nuORF	74.25504064058377	0.12238981753128622	4				NaN	NaN	0	NaN	9588	3540	13128
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13131	34.137	NaN	1656.3	30	0	192.39	0.035			+	25535	LPTLTTVASP	10	59	500.2904488742176	NaN	0	500.29083251953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LPTLTTVASP_	REV__ENST00000282605.8_2_5:133861409-133887760:+|nuORF;REV__ENST00000395003.5_2_5:133861968-133887760:+|nuORF	58.78195531508484	0.24422493511477816	4				NaN	NaN	0	NaN	9589	3540	13128
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13148	34.171	NaN	3342.9	30	0	511.71	0.214	+			50628	YEAVREVL	8	50	489.76624972289386	977.5179465125877	2	489.7659606933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YEAVREVL_	ENSG00000198755|ENST00000322203|RPL10A;ENST00000464112.5_1_6:35436546-35438524:+|nuORF;ENST00000467020.5_1_6:35436211-35436817:+|nuORF;ENST00000472730.1_1_3:61728131-61728755:-|nuORF;ENST00000490335.4_1_6:35436211-35436651:+|nuORF;RPL10A|p.P135Lfs*17|1|0.35|ENSG00000198755|chr6:35470270-35470270|C/-|frameshift_variant	93.1432384553994	0.2679547234115296	4				NaN	NaN	0	NaN	9603	3543	13147
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13149	34.175	NaN	1690.2	30	0	376.74	0.035				-1	VMTGSYNNF	9	50	524.723506415653	1047.432459898106	2	524.72412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_VM(Oxidation (M))TGSYNNF_	ABHD12-PPP2R2A|1|fusion;ENSG00000221914|ENST00000380737|PPP2R2A;ENST00000517754.1_1_8:26221160-26227926:+|nuORF;nc|ENSG00000221914|P63151-2|PPP2R2A	52.936696900407355	0.27249468807391813	4				NaN	NaN	0	NaN	9604	3543	13147
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13167	34.21	NaN	5305	30	0	779.43	0.214	+			50498	YAMKAEVL	8	59	462.74599163211803	923.4774303310361	2	462.74609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YAMKAEVL_	ENSG00000183576|ENST00000331768|SETD3	74.25504064058377	0.37144338840759816	4				NaN	NaN	0	NaN	9619	3546	13166
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13168	34.214	NaN	1131.1	30	0	156.21	0.106	+			18104	IKVGNLEI	8	50	443.27374267578125	NaN	0	443.27374267578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IKVGNLEI_	tr|U7SGN9|U7SGN9_FUSNU4-hydroxy-3-methylbut-2-en-1-yldiphosphatesynthase(flavodoxin)OS=FusobacteriumnucleatumCTI-5OX=1316586GN=ispGPE=3SV=1	53.351449002276354	1.7418937515398478	4				NaN	NaN	0	NaN	9620	3546	13166
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13169	34.216	NaN	1194.2	30	0	299.81	0.036				-1	LCALFLSSR	9	59	533.7911429089675	1065.5677328847348	2	534.293212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LC(Carbamidomethyl (C))ALFLSSR_	ENST00000472823.5_1_6:29570561-29570969:-|nuORF	27.882242232435846	0.5426732730940306	4				NaN	NaN	0	NaN	9621	3546	13166
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13187	34.251	NaN	2752.5	30	0	668.6	0.214			+	12798	GELYEQLLA	9	53	518.2713457081013	1034.5281384830025	2	518.2715454101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GELYEQLLA_	REV__ANKS1B|p.T279A|1|0.2|ENSG00000185046|chr12:99779883-99779883|T/C|missense_variant	60.97194046774394	0.20551255781574032	4				NaN	NaN	0	NaN	9636	3549	13186
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13188	34.255	NaN	5123	30	0	1079.3	0.106	+			45252	TVQELAIYK	9	60	532.8029675182821	1063.5913821033641	2	532.803466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVQELAIYK_	ENSG00000102595|ENST00000376747|UGGT2;nc|ENSG00000102595|Q9NYU1-2|UGGT2;UGGT2|p.N1268Ifs*10|1|0.3|ENSG00000102595|chr13:95859613-95859613|T/-|frameshift_variant	134.7655990226056	0.012935733000282069	4				NaN	NaN	0	NaN	9637	3549	13186
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13189	34.257	NaN	7036.1	30	0	2750.6	0.106	+			41286	SVLLFVTKK	9	42	345.55831561929926	1033.6531174580978	3	345.5585021972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVLLFVTKK_	ENSG00000198231|ENST00000389924|DDX42;ENST00000578593.1_1_17:61889231-61895755:+|nuORF;nc|ENSG00000198231|Q86XP3-2|DDX42	45.02220120713402	0.3613509778819777	4				NaN	NaN	0	NaN	9638	3549	13186
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13190	34.259	NaN	2625.5	30	0	629.83	0.106	+			17121	HSMDMKFTY	9	64	580.2489140135599	1158.4832750939197	2	580.2498779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HSMDMKFTY_	ENSG00000116016|ENST00000263734|EPAS1	112.41091882917199	0.026537921851008135	4				NaN	NaN	0	NaN	9639	3549	13186
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13191	34.26	NaN	3364.3	30	0	355.93	0.106	+			30672	QAYSGIQQY	9	52	529.251162185411	1056.4877714376219	2	529.2515869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QAYSGIQQY_	CELF2|p.A423Gfs*31|1|0.4|ENSG00000048740|chr10:11325842-11325843|-/G|frameshift_variant;ENSG00000048740|ENST00000633077|CELF2;ENSG00000149187|ENST00000687097|CELF1;nc|ENSG00000048740|O95319-2|CELF2;nc|ENSG00000048740|O95319-3|CELF2;nc|ENSG00000048740|O95319-4|CELF2;nc|ENSG00000048740|O95319-5|CELF2;nc|ENSG00000048740|O95319|CELF2;nc|ENSG00000149187|Q92879-2|CELF1;nc|ENSG00000149187|Q92879-3|CELF1;nc|ENSG00000149187|Q92879-4|CELF1;nc|ENSG00000149187|Q92879-5|CELF1;nc|ENSG00000149187|Q92879-6|CELF1;nc|ENSG00000149187|Q92879|CELF1	87.69643885390035	0.07135982304947239	4				NaN	NaN	0	NaN	9640	3549	13186
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13192	34.262	NaN	1250.1	30	0	130.79	0.035	+			26559	LTSLYVFY	8	54	503.26632443479923	NaN	0	503.26678466796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LTSLYVFY_	ENSG00000153976|ENST00000284110|HS3ST3A1;HS3ST3A1|p.T371Mfs*31|1|0.2|ENSG00000153976|chr17:13496306-13496307|-/ATGGATAACCA|frameshift_variant	37.028477286268924	1.7418937515398478	4				NaN	NaN	0	NaN	9641	3549	13186
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13193	34.263	NaN	1194.9	30	0	204.6	0.139	+			23648	LARLRSVF	8	52	481.2986145019531	NaN	0	481.2986145019531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LARLRSVF_	ENSG00000165105|ENST00000376447|RASEF;nc|ENSG00000165105|Q8IZ41-2|RASEF	35.61828744233558	1.7418937515398478	4				NaN	NaN	0	NaN	9642	3549	13186
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13211	34.3	NaN	6053.8	30	0	886.11	0.214	+			8475	EASKLVMSY	9	64	514.2600678601793	1026.5055827871586	2	514.2603759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EASKLVMSY_	ENSG00000128641|ENST00000392318|MYO1B;ENSG00000166866|ENST00000300119|MYO1A;ENST00000471904.1_1_2:192128111-192215016:+|nuORF;MYO1B|p.A603Sfs*37|1|0.42|ENSG00000128641|chr2:191390310-191390311|-/A|frameshift_variant;MYO1B|p.F948Cfs*47|1|0.41|ENSG00000128641|chr2:191411140-191411141|-/TG|frameshift_variant;MYO1B|p.S730Afs*4|2|0.4|ENSG00000128641|chr2:191393178-191393178|A/-|frameshift_variant;nc|ENSG00000128641|O43795-2|MYO1B	190.51785368661015	0.00024017880420896124	4				NaN	NaN	0	NaN	9657	3552	13210
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13212	34.304	NaN	3291.9	30	0	354.34	0.106	+			34688	RVTDLFIGK	9	64	524.8112796579433	1047.6080063826864	2	524.811767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RVTDLFIGK_	ENSG00000176225|ENST00000640769|RTTN;nc|ENSG00000176225|Q86VV8-3|RTTN;nc|ENSG00000176225|Q86VV8-4|RTTN;RTTN|p.Y1487Mfs*4|1|0.38|ENSG00000176225|chr18:70075457-70075457|A/-|frameshift_variant	72.87924865735499	0.12833875048249987	4				NaN	NaN	0	NaN	9658	3552	13210
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13213	34.306	NaN	704.44	30	0	175.13	0.033			+	24799	LILKPPAP	8	34	424.7833822325733	NaN	0	424.7835388183594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LILKPPAP_	REV__ENSG00000197483|ENST00000598519|ZNF628	28.2542754592877	1.7418937515398478	4				NaN	NaN	0	NaN	9659	3552	13210
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13226	34.333	NaN	4954.2	30	0	734.1	0.214	+			47879	VSLGTPIMK	9	60	473.2756719128606	944.5367908925213	2	473.2756042480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSLGTPIMK_	ECT2|p.K832Rfs*25|1|0.1|ENSG00000114346|chr3:172815693-172815693|A/-|frameshift_variant;ENSG00000114346|ENST00000392692|ECT2;nc|ENSG00000114346|Q9H8V3-2|ECT2;nc|ENSG00000114346|Q9H8V3-3|ECT2;nc|ENSG00000114346|Q9H8V3-4|ECT2	118.74307786436346	0.02196067127630568	4				NaN	NaN	0	NaN	9669	3555	13225
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13227	34.337	NaN	3448.5	30	0	712.07	0.106			+	13367	GLALLEDIK	9	61	486.29225516669214	970.5699574001843	2	486.29241943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GLALLEDIK_	REV__TPR|p.T205I|1|0.21|ENSG00000047410|chr1:186362919-186362919|G/A|missense_variant	47.91560031466742	0.327412564698279	4				NaN	NaN	0	NaN	9670	3555	13225
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13228	34.339	NaN	1414.1	30	0	516.33	0.036	+			32375	QVAKVFDQY	9	54	549.2855662835892	1096.5565796339783	2	549.2860107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QVAKVFDQY_	ENSG00000092108|ENST00000458591|SCFD1;nc|ENSG00000092108|Q8WVM8-2|SCFD1;nc|ENSG00000092108|Q8WVM8-3|SCFD1;SCFD1|p.V202Cfs*43|1|0.35|ENSG00000092108|chr14:30643389-30643390|-/T|frameshift_variant	65.46538089061403	0.16805504838372562	4				NaN	NaN	0	NaN	9671	3555	13225
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13242	34.368	NaN	2384.2	30	0	235.68	0.214	+			25498	LPSGLHSLQ	9	60	476.2667385327502	950.5189241323004	2	476.26666259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LPSGLHSLQ_	ENST00000416600.6_1_20:3847373-3847754:+|nuORF	42.396135135203025	0.392153681582562	4				NaN	NaN	0	NaN	9682	3558	13241
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13243	34.372	NaN	3608.2	30	0	398.34	0.106	+			9836	EPMDIRSAY	9	63	541.2528435749289	1080.4911342166577	2	541.2533569335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EPMDIRSAY_	ENSG00000120549|ENST00000376454|KIAA1217;KIAA1217|p.N1661Tfs*23|1|0.07|ENSG00000120549|chr10:24544247-24544247|A/-|frameshift_variant;nc|ENSG00000120549|Q5T5P2-3|KIAA1217	74.25504064058377	0.12238981753128622	4				NaN	NaN	0	NaN	9683	3558	13241
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13244	34.374	NaN	4542.1	30	0	1227.6	0.106	+			48171	VTAAPSQPP	9	58	434.23254979741387	866.4505466616278	2	434.23248291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTAAPSQPP_	ENSG00000196428|ENST00000688009|TSC22D2;nc|ENSG00000196428|O75157|TSC22D2	66.42927471994793	0.16001998865088202	4				NaN	NaN	0	NaN	9684	3558	13241
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13245	34.376	NaN	3945.2	30	0	2646.4	0.106	+			29422	PCARQGGL	8	38	401.2048060987926	800.3950592643852	2	401.2047424316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PCARQGGL_	ENST00000295087.12_1_2:152684749-152684917:-|nuORF	15.63621529709179	0.7929342111279789	4				NaN	NaN	0	NaN	9685	3558	13241
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13246	34.377	NaN	1145.8	30	0	253.28	0.035				-1	KQQMLENQ	8	40	517.7523908996177	1033.4902288660353	2	517.7534790039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_KQQM(Oxidation (M))LENQ_	ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1	40.5726180659479	0.6527593143185008	4				NaN	NaN	0	NaN	9686	3558	13241
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13261	34.409	NaN	3630.9	30	0	369.99	0.214	+			37413	SLGLKWLF	8	62	482.28459441670185	NaN	0	482.284912109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLGLKWLF_	ENST00000465933.1_1_3:57678941-57679028:+|nuORF	57.81127852772723	1.7418937515398478	4				NaN	NaN	0	NaN	9698	3561	13260
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13262	34.413	NaN	2533.8	30	0	352.29	0.106	+			43916	TPAEIREEF	9	66	546.2722400518618	1090.5299271705235	2	546.2731323242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TPAEIREEF_	ENSG00000007923|ENST00000377577|DNAJC11;ENST00000460594.5_1_1:6714320-6761860:-|nuORF;ENST00000485073.5_1_1:6713895-6761860:-|nuORF;nc|ENSG00000007923|Q9NVH1-2|DNAJC11;nc|ENSG00000007923|Q9NVH1-3|DNAJC11	76.16968421966216	0.11411088698345859	4				NaN	NaN	0	NaN	9699	3561	13260
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13263	34.415	NaN	1375	30	0	275.28	0.036			+	35544	SAVPTQQQVV	10	57	528.7870421052043	NaN	0	528.78759765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAVPTQQQVV_	REV__ENSG00000183495|ENST00000389561|EP400;REV__nc|ENSG00000183495|Q96L91-3|EP400;REV__nc|ENSG00000183495|Q96L91-4|EP400;REV__nc|ENSG00000183495|Q96L91-5|EP400;REV__nc|ENSG00000183495|Q96L91|EP400	32.81241826257853	0.3924360933802784	4				NaN	NaN	0	NaN	9700	3561	13260
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13280	34.45	NaN	13241	30	0	2845.3	0.214	+			5762	AVGLVLPAK	9	64	434.28671273755026	866.5588725419005	2	434.28704833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVGLVLPAK_	ENSG00000162496|ENST00000616661|DHRS3;nc|ENSG00000162496|O75911-2|DHRS3	94.00642277110589	0.05356993013874309	4				NaN	NaN	0	NaN	9714	3564	13279
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13281	34.453	NaN	3877.8	30	0	1847.2	0.106				-1	KAMSRNSSVA	10	56	533.7668469383826	1065.5191409435652	2	533.7682495117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_KAM(Oxidation (M))SRNSSVA_	ENSG00000105650|ENST00000262805|PDE4C;ENST00000597360.5_1_19:18331913-18333093:-|nuORF;nc|ENSG00000285188|Q08493-2|PDE4C;nc|ENSG00000285188|Q08493|PDE4C	26.063383197487333	0.6669871633831898	4				NaN	NaN	0	NaN	9715	3564	13279
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13282	34.455	NaN	10224	30	0	3424.7	0.106	+			38772	SSLYIILKK	9	47	355.56183927215926	1063.6636884166778	3	355.5621643066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSLYIILKK_	ENSG00000155561|ENST00000285968|NUP205	69.6276240434122	0.14239879520340665	4				NaN	NaN	0	NaN	9716	3564	13279
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13283	34.457	NaN	19025	30	0	11567	0.106	+			47701	VSFDKLKLT	9	53	350.87775841865994	1049.61144585618	3	350.8780822753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSFDKLKLT_	ENSG00000092607|ENST00000369429|TBX15;ENSG00000167800|ENST00000335385|TBX10;ENSG00000184058|ENST00000649276|TBX1;nc|ENSG00000092607|Q96SF7-2|TBX15;nc|ENSG00000184058|O43435-2|TBX1;nc|ENSG00000184058|O43435-3|TBX1;nc|ENSG00000184058|O43435|TBX1;TBX10|p.P319Rfs*20|1|0.14|ENSG00000167800|chr11:67631807-67631807|G/-|frameshift_variant;TBX15|p.N507Cfs*20|1|0.07|ENSG00000092607|chr1:118885021-118885022|TT/-|frameshift_variant;TBX15|p.T524Hfs*4|1|0.48|ENSG00000092607|chr1:118884971-118884972|-/G|frameshift_variant	45.02220120713402	0.3613509778819777	4				NaN	NaN	0	NaN	9717	3564	13279
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13284	34.459	NaN	1856.6	30	0	355.15	0.035			+	26197	LSRYLRGL	8	65	489.2978703205294	NaN	0	489.298828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSRYLRGL_	REV__ENSG00000133687|ENST00000539277|TMTC1;REV__nc|ENSG00000133687|Q8IUR5-1|TMTC1;REV__nc|ENSG00000133687|Q8IUR5-2|TMTC1;REV__nc|ENSG00000133687|Q8IUR5-4|TMTC1;REV__TMTC1|p.E735Kfs*5|1|0.3|ENSG00000133687|chr12:29516454-29516454|T/-|frameshift_variant	47.95952297671804	1.7418937515398478	4				NaN	NaN	0	NaN	9718	3564	13279
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13299	34.49	NaN	5666.7	30	0	2724.6	0.214	+			14830	GTLKDLIYK	9	69	525.8131321671397	1049.6117114010792	2	525.81298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTLKDLIYK_	ENSG00000168297|ENST00000356151|PXK;nc|ENSG00000168297|Q7Z7A4-2|PXK;nc|ENSG00000168297|Q7Z7A4-3|PXK;nc|ENSG00000168297|Q7Z7A4-4|PXK;nc|ENSG00000168297|Q7Z7A4-5|PXK;nc|ENSG00000168297|Q7Z7A4-6|PXK;nc|ENSG00000168297|Q7Z7A4-7|PXK	81.52500206392136	0.09095445986635249	4				NaN	NaN	0	NaN	9730	3567	13298
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13300	34.494	NaN	5727.5	30	0	669.38	0.106	+			8174	EAANTMVNY	9	64	506.72363515074505	1011.4327173682901	2	506.7236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EAANTMVNY_	ENSG00000011304|ENST00000356948|PTBP1;ENST00000586944.5_1_19:797434-805231:+|nuORF;nc|ENSG00000011304|P26599-1|PTBP1;nc|ENSG00000011304|P26599-2|PTBP1	136.26810882979174	0.012230845423532208	4				NaN	NaN	0	NaN	9731	3567	13298
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13301	34.496	NaN	1571.1	30	0	195.82	0.106			+	36739	SGVSLSVPLK	10	58	493.7970988016997	985.5796446701994	2	493.7963562011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SGVSLSVPLK_	REV__ENSG00000105198|ENST00000221797|LGALS13;REV__ENSG00000249861|ENST00000392051|LGALS16;REV__LGALS16|p.K87Nfs*15|1|0.15|ENSG00000249861|chr19:39658627-39658630|AACC/-|frameshift_variant	58.22992032128504	0.38193887838457763	4				NaN	NaN	0	NaN	9732	3567	13298
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13302	34.498	NaN	1211	30	0	86.66	0.106				-1	CFEPANQM	8	47	498.6988775653514	NaN	0	498.69866943359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_C(Carbamidomethyl (C))FEPANQM_	ENSG00000075886|ENST00000321253|TUBA3D;ENSG00000123416|ENST00000336023|TUBA1B;ENSG00000127824|ENST00000248437|TUBA4A;ENSG00000152086|ENST00000312988|TUBA3E;ENSG00000167552|ENST00000301071|TUBA1A;ENSG00000167553|ENST00000301072|TUBA1C;ENSG00000198033|ENST00000400113|TUBA3C;nc|ENSG00000123416|P68363-2|TUBA1B;nc|ENSG00000127824|P68366-2|TUBA4A;nc|ENSG00000167552|Q71U36-2|TUBA1A;nc|ENSG00000198033|P0DPH7-2|TUBA3C;TUBA3C|p.T361Rfs*18|1|0.17|ENSG00000198033|chr13:19174136-19174136|G/-|frameshift_variant;TUBA3D|p.G366Efs*13|1|0.17|ENSG00000075886|chr2:131482588-131482588|G/-|frameshift_variant;TUBA3D|p.V328Pfs*54|1|0.45|ENSG00000075886|chr2:131480665-131480666|-/CCCAAAGA|frameshift_variant	37.15910966729921	1.7418937515398478	4				NaN	NaN	0	NaN	9733	3567	13298
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13303	34.5	NaN	732.18	30	0	95.106	0.033	+			18409	ISAAFNIV	8	37	417.73938342554646	NaN	0	417.7393798828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ISAAFNIV_	ENSG00000163393|ENST00000369503|SLC22A15	38.80614096846853	1.7418937515398478	4				NaN	NaN	0	NaN	9734	3567	13298
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13315	34.525	NaN	4367.7	30	0	1522.5	0.214			+	36650	SGLPPPPRAA	10	64	502.77958290692527	1003.5446128806506	2	502.779541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SGLPPPPRAA_	REV__ENST00000396203.6_1_3:40498851-40498923:+|nuORF	56.72105179125745	0.3956618550748046	4				NaN	NaN	0	NaN	9743	3570	13314
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13316	34.529	NaN	14663	30	0	4475.5	0.106	+			15950	HAGLVYEY	8	67	476.2319558462451	950.4493587592902	2	476.2314758300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HAGLVYEY_	ENSG00000132141|ENST00000314144|CCT6B;ENSG00000146731|ENST00000275603|CCT6A;ENST00000492618.5_1_7:56127237-56129562:+|nuORF;ENST00000577307.1_1_17:33266566-33269658:-|nuORF;nc|ENSG00000132141|Q92526-2|CCT6B;nc|ENSG00000132141|Q92526-3|CCT6B;nc|ENSG00000146731|P40227-2|CCT6A	65.89745868150666	0.44339748671293633	4				NaN	NaN	0	NaN	9744	3570	13314
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13317	34.531	NaN	1342.4	30	0	225.54	0.106	+			7691	DLIVAQPY	8	47	459.75131463335686	917.4880763335137	2	459.7516174316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DLIVAQPY_	ENST00000273368.8_1_3:111717934-111718274:+|nuORF	44.116797842482775	0.6307669463330267	4				NaN	NaN	0	NaN	9745	3570	13314
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13318	34.533	NaN	1357.8	30	0	326.78	0.106			+	7466	DGADVLAQQI	10	50	515.2635785378125	1028.5126041424248	2	515.2634887695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DGADVLAQQI_	REV__ENSG00000109775|ENST00000264689|UFSP2	44.377184641726394	0.5088115166961078	4				NaN	NaN	0	NaN	9746	3570	13314
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13319	34.534	NaN	1111.8	30	0	121.88	0.034			+	25074	LLLNCAMF	8	47	462.7359924316406	NaN	0	462.7359924316406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LLLNCAMF_	REV__ENSG00000135801|ENST00000258281|TAF5L	28.2542754592877	1.7418937515398478	4				NaN	NaN	0	NaN	9747	3570	13314
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13332	34.562	NaN	4535.7	30	0	671.73	0.214	+			20907	KITDFLQTK	9	70	547.3161598261661	1092.617766719132	2	547.3167724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KITDFLQTK_	ENSG00000164296|ENST00000296736|TIGD6	113.67052763333328	0.025252630838926	4				NaN	NaN	0	NaN	9757	3573	13331
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13333	34.565	NaN	10155	30	0	2301.2	0.106	+			41841	SVSTPLIIK	9	73	479.3025616020887	956.5905702709774	2	479.3025207519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVSTPLIIK_	ENSG00000029639|ENST00000367166|TFB1M	52.936696900407355	0.27249468807391813	4				NaN	NaN	0	NaN	9758	3573	13331
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13334	34.567	NaN	5733	30	0	593.12	0.106	+			34029	RSLDNFFAK	9	66	549.2906174718695	1096.566682010539	2	549.2906494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RSLDNFFAK_	ENSG00000091527|ENST00000264993|CDV3;nc|ENSG00000091527|Q9UKY7-2|CDV3	109.43880257439609	0.029570636687953285	4				NaN	NaN	0	NaN	9759	3573	13331
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13335	34.569	NaN	2512	30	0	408.62	0.106	+			11849	FTAPPVLGK	9	56	465.27584712378416	928.5371413143683	2	465.2754821777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FTAPPVLGK_	ENSG00000126883|ENST00000359428|NUP214;nc|ENSG00000126883|P35658-2|NUP214;nc|ENSG00000126883|P35658-3|NUP214;nc|ENSG00000126883|P35658-4|NUP214;nc|ENSG00000126883|P35658-5|NUP214	51.33545320467046	0.2872990594074956	4				NaN	NaN	0	NaN	9760	3573	13331
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13336	34.571	NaN	1498.2	30	0	255.1	0.106			+	48351	VTGLVVAPR	9	46	456.2869323467643	910.5593117603286	2	456.7884521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTGLVVAPR_	REV__ENST00000264956.10_2_4:5815433-5815706:+|nuORF	45.9519527083369	0.35044536499095585	4				NaN	NaN	0	NaN	9761	3573	13331
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13337	34.573	NaN	1345	30	0	167.99	0.036	+			21387	KMLEVLVVK	9	59	529.8361153646362	NaN	0	529.8358154296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KMLEVLVVK_	ENSG00000142185|ENST00000397928|TRPM2;nc|ENSG00000142185|O94759-2|TRPM2	76.16968421966216	0.08450868013726211	4				NaN	NaN	0	NaN	9762	3573	13331
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13338	34.573	NaN	975.63	30	0	206.06	0.14	+			49266	VVPVSGSCCGS	11	49	497.71876512765937	NaN	0	497.71795654296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VVPVSGSCCGS_	ENST00000561708.1_1_16:70433404-70456862:-|nuORF	56.72105179125745	0.2643439005903171	4				NaN	NaN	0	NaN	9763	3573	13331
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13356	34.613	NaN	2577.1	30	0	375.68	0.214	+			45141	TVLKEIFAK	9	61	524.8237322463142	1047.6329115594283	2	524.8242797851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVLKEIFAK_	ENSG00000132698|ENST00000361084|RAB25	76.16968421966216	0.11411088698345859	4				NaN	NaN	0	NaN	9778	3576	13355
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13357	34.616	NaN	4001	30	0	1375.2	0.106	+			18885	IVIETGPLK	9	52	485.30173168747314	968.5889104417463	2	485.3021545410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IVIETGPLK_	ENSG00000151657|ENST00000379562|KIN	77.31757898189308	0.1091473830098891	4				NaN	NaN	0	NaN	9779	3576	13355
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13358	34.618	NaN	1290.5	30	0	151.11	0.035			+	31409	QKLKELSW	8	56	516.29726319602	1030.57997345884	2	516.2974853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QKLKELSW_	REV__ENSG00000054523|ENST00000676179|KIF1B;REV__nc|ENSG00000054523|O60333-2|KIF1B;REV__nc|ENSG00000054523|O60333-4|KIF1B	51.33545320467046	0.5859736979383976	4				NaN	NaN	0	NaN	9780	3576	13355
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13371	34.645	NaN	2918	30	0	619.6	0.214				-1	EALNVICVS	9	61	502.7566121744894	1003.4986714157789	2	502.75640869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_EALNVIC(Carbamidomethyl (C))VS_	ENSG00000174373|ENST00000680220|RALGAPA1;ENST00000443361.1_1_9:108285096-108287232:+|nuORF;nc|ENSG00000174373|Q6GYQ0-2|RALGAPA1;nc|ENSG00000174373|Q6GYQ0-4|RALGAPA1;nc|ENSG00000174373|Q6GYQ0-5|RALGAPA1;nc|ENSG00000174373|Q6GYQ0-6|RALGAPA1;nc|ENSG00000174373|Q6GYQ0-7|RALGAPA1;nc|ENSG00000174373|Q6GYQ0|RALGAPA1;RALGAPA1|p.N1861Tfs*6|1|0.34|ENSG00000174373|chr14:35595743-35595743|T/-|frameshift_variant	47.657333605630114	0.33044192980041115	4				NaN	NaN	0	NaN	9790	3579	13370
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13372	34.649	NaN	1496.6	30	0	224.47	0.106	+			28846	NPVDWKEQY	9	57	589.777266365249	1177.539979797298	2	590.2791748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NPVDWKEQY_	ENSG00000106397|ENST00000223127|PLOD3;ENST00000460132.5_1_7:100853286-100853899:-|nuORF	101.25262130126117	0.03792372629710479	4				NaN	NaN	0	NaN	9791	3579	13370
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13373	34.651	NaN	1999.4	30	0	295.94	0.035	+			25292	LNVKNVPLK	9	57	512.8293062050417	1023.6440594768834	2	513.331298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LNVKNVPLK_	ENSG00000173821|ENST00000582970|RNF213;nc|ENSG00000173821|Q63HN8-4|RNF213;nc|ENSG00000173821|Q63HN8|RNF213;RNF213|p.C5022Lfs*7|1|0.3|ENSG00000173821|chr17:80389237-80389237|G/-|frameshift_variant;RNF213|p.P2167Lfs*64|1|0.09|ENSG00000173821|chr17:80344834-80344835|-/T|frameshift_variant	42.396135135203025	0.392153681582562	4				NaN	NaN	0	NaN	9792	3579	13370
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13387	34.681	NaN	9598.1	30	0	1927.7	0.214	+			47850	VSLDYAISK	9	67	498.2740337913136	994.5335146494273	2	498.27392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSLDYAISK_	ENSG00000181220|ENST00000458143|ZNF746;ENSG00000204946|ENST00000434415|ZNF783;ENST00000472212.5_1_7:149248897-149318218:-|nuORF;ENST00000481762.5_1_7:149260692-149318218:-|nuORF;ENST00000486492.5_1_7:149255763-149318218:-|nuORF;ENST00000493198.5_1_7:149316940-149318218:-|nuORF;nc|ENSG00000181220|Q6NUN9-2|ZNF746;nc|ENSG00000181220|Q6NUN9|ZNF746;nc|ENSG00000204946|Q6ZMS7-1|ZNF783	146.78539889680295	0.007618400906539062	4				NaN	NaN	0	NaN	9803	3582	13386
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13388	34.684	NaN	4239.7	30	0	1253.2	0.106	+			49386	VVTDSMLIK	9	60	503.28589882297035	1004.5572447127407	2	503.2857666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVTDSMLIK_	ENSG00000110628|ENST00000649076|SLC22A18	32.81241826257853	0.4965981579233955	4				NaN	NaN	0	NaN	9804	3582	13386
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13389	34.686	NaN	3544.6	30	0	673.2	0.106	+			47039	VLELEAKM	8	54	466.75986386461045	931.5051747960209	2	466.7601318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VLELEAKM_	CLIP1|p.E992Lfs*32|1|0.2|ENSG00000130779|chr12:122328315-122328321|TGCTTCT/-|frameshift_variant;CLIP1|p.M1151Wfs*8|1|0.31|ENSG00000130779|chr12:122316771-122316771|T/-|frameshift_variant;ENSG00000130779|ENST00000620786|CLIP1;nc|ENSG00000130779|P30622-1|CLIP1;nc|ENSG00000130779|P30622-2|CLIP1	83.28718786952967	0.2977916691876266	4				NaN	NaN	0	NaN	9805	3582	13386
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13390	34.688	NaN	871.92	30	0	84.321	0.106	+			37272	SLAGLGIDL	9	42	429.7503254321923	857.4860979311846	2	429.7500915527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLAGLGIDL_	ENST00000473996.1_1_3:48454981-48455344:-|nuORF	51.33545320467046	0.2872990594074956	4				NaN	NaN	0	NaN	9806	3582	13386
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13391	34.69	NaN	1030.5	30	0	86.728	0.106	+			27536	MPAKATIF	8	48	439.7437402636865	877.472927594173	2	439.742919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MPAKATIF_	EIF2A|p.I537Sfs*4|1|0.78|ENSG00000144895|chr3:150581723-150581723|A/-|frameshift_variant;EIF2A|p.Y349Hfs*7|1|0.06|ENSG00000144895|chr3:150572190-150572191|-/CATA|frameshift_variant;ENSG00000144895|ENST00000460851|EIF2A;nc|ENSG00000144895|Q9BY44-2|EIF2A;nc|ENSG00000144895|Q9BY44-3|EIF2A;nc|ENSG00000144895|Q9BY44-4|EIF2A	44.116797842482775	0.6307669463330267	4				NaN	NaN	0	NaN	9807	3582	13386
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13392	34.692	NaN	1398.3	30	0	402.82	0.034			+	2743	ARARQPKL	8	44	470.29498291015625	NaN	0	470.29498291015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ARARQPKL_	REV__ENST00000494253.1_1_10:71144437-71146246:+|nuORF	31.954861631926434	1.7418937515398478	4				NaN	NaN	0	NaN	9808	3582	13386
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13407	34.723	NaN	6543.9	30	0	1107.9	0.214	+			44080	TPTGIKVVM	9	66	473.27506751683774	944.5355821004755	2	473.2752380371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TPTGIKVVM_	ENSG00000170043|ENST00000303731|TRAPPC1	96.19043198914106	0.047412499214244314	4				NaN	NaN	0	NaN	9820	3585	13406
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13408	34.727	NaN	1442.5	30	0	294.33	0.106	+			49256	VVNVSPYLK	9	50	509.7997116799299	1017.5848704266598	2	509.79986572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVNVSPYLK_	ENSG00000167861|ENST00000425042|HID1;HID1|p.P773Lfs*8|1|0.17|ENSG00000167861|chr17:74951619-74951619|G/-|frameshift_variant;nc|ENSG00000167861|Q8IV36-2|HID1;nc|ENSG00000167861|Q8IV36-3|HID1	53.08895987439943	0.27122541748218487	4				NaN	NaN	0	NaN	9821	3585	13406
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13409	34.729	NaN	1562.7	30	0	126.57	0.106	+			7833	DPVVADYKY	9	59	535.2639293303938	1068.5133057275875	2	535.2650756835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DPVVADYKY_	ENSG00000132170|ENST00000651735|PPARG;ENST00000477039.5_1_3:12393091-12447643:+|nuORF;nc|ENSG00000132170|P37231-2|PPARG;nc|ENSG00000132170|P37231-3|PPARG;nc|ENSG00000132170|P37231|PPARG;PPARG|p.L298Cfs*38|1|0.26|ENSG00000132170|chr3:12416771-12416771|C/-|frameshift_variant;PPARG|p.S186Vfs*47|1|0.08|ENSG00000132170|chr3:12392683-12392683|A/-|frameshift_variant	84.81729255234993	0.07947707105691067	4				NaN	NaN	0	NaN	9822	3585	13406
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13410	34.731	NaN	6209.3	30	0	2058.2	0.032			+	13112	GGGGGRSGAL	10	44	394.7040523227236	787.3935517122472	2	394.703857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GGGGGRSGAL_	REV__ENST00000342160.7_2_X:53707007-53711004:-|nuORF	29.14955571784316	0.6417842315402807	4				NaN	NaN	0	NaN	9823	3585	13406
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13422	34.756	NaN	26908	30	0	2823.9	0.214	+			5243	ATVAVPLVGK	10	74	477.80258077506375	953.5906086169275	2	477.8022766113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATVAVPLVGK_	ENSG00000136986|ENST00000259512|DERL1;nc|ENSG00000136986|Q9BUN8-2|DERL1	107.00750918261382	0.05688644658934505	4				NaN	NaN	0	NaN	9832	3588	13421
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13423	34.76	NaN	1868.3	30	0	322.53	0.106	+			16606	HGLVEVASY	9	54	487.75046105066764	973.4863691681353	2	487.750244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HGLVEVASY_	ENSG00000099860|ENST00000215631|GADD45B;ENST00000592937.1_1_19:2477233-2477596:+|nuORF	68.78682469695295	0.14603441672067394	4				NaN	NaN	0	NaN	9833	3588	13421
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13424	34.762	NaN	2907.8	30	0	649.61	0.106	+			27694	MPVNTNQNF	9	55	532.745360057723	1063.476167182246	2	532.7461547851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MPVNTNQNF_	ENSG00000136021|ENST00000360820|SCYL2	79.71258880314673	0.09879134589249085	4				NaN	NaN	0	NaN	9834	3588	13421
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13425	34.764	NaN	1665.3	30	0	502.84	0.106	+			26419	LTFTQKWN	8	47	519.2738833660675	1036.5332137989349	2	519.273681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LTFTQKWN_	ENSG00000078668|ENST00000022615|VDAC3;ENST00000521348.5_1_8:42251729-42259534:+|nuORF;ENST00000603132.1_1_12:55196819-55197167:-|nuORF;nc|ENSG00000078668|Q9Y277-2|VDAC3	23.04248740728303	0.7814162927298575	4				NaN	NaN	0	NaN	9835	3588	13421
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13426	34.765	NaN	1095.5	30	0	88.278	0.036	+			17361	IALHFEPPQ	9	50	526.2843509334347	NaN	0	526.28369140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IALHFEPPQ_	BCL6|p.N320Qfs*11|1|0.27|ENSG00000113916|chr3:187729447-187729448|-/G|frameshift_variant	27.882242232435846	0.3367954786602879	4				NaN	NaN	0	NaN	9836	3588	13421
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13439	34.793	NaN	6119.7	30	0	567.39	0.214	+			2498	APSVVKISY	9	72	482.27952008937206	962.5444872455441	2	482.279052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_APSVVKISY_	ENSG00000080503|ENST00000349721|SMARCA2;nc|ENSG00000080503|P51531-2|SMARCA2	104.01359247289065	0.03510646158778409	4				NaN	NaN	0	NaN	9846	3591	13438
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13440	34.796	NaN	8931.5	30	0	2092.9	0.033			+	1078	AELAKVEL	8	57	436.7581776881813	871.5018024431627	2	436.7578430175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AELAKVEL_	REV__TNRC6B|p.L546Sfs*63|1|0.35|ENSG00000100354|chr22:40265862-40265862|C/-|frameshift_variant	112.41091882917199	0.2438316832735406	4				NaN	NaN	0	NaN	9847	3591	13438
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13456	34.83	NaN	9113.2	30	0	2721.3	0.214	+			38590	SSGDIFLEK	9	64	498.25581703946096	994.497081145722	2	498.2555847167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSGDIFLEK_	AP3M2|p.V318Sfs*2|1|0.39|ENSG00000070718|chr8:42167308-42167308|G/-|frameshift_variant;ENSG00000070718|ENST00000396926|AP3M2;nc|ENSG00000070718|P53677-2|AP3M2	155.5846463517096	0.005567437401040498	4				NaN	NaN	0	NaN	9860	3594	13455
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13457	34.833	NaN	1231.6	30	0	216.86	0.035	+			38084	SPTEVVERL	9	48	515.2821299835775	1028.549707033955	2	515.2818603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SPTEVVERL_	ENSG00000055917|ENST00000361078|PUM2;nc|ENSG00000055917|Q8TB72-2|PUM2;nc|ENSG00000055917|Q8TB72-4|PUM2;nc|ENSG00000055917|Q8TB72|PUM2	44.377184641726394	0.36891676396732553	4				NaN	NaN	0	NaN	9861	3594	13455
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13483	34.891	NaN	5784	30	0	1698	0.141			+	10257	ETLGPLLR	8	54	449.7715634976715	897.528574062143	2	449.7715148925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ETLGPLLR_	REV__ENST00000588933.5_1_19:9529933-9544772:-|nuORF	50.0245360154114	0.5941082100236891	4				NaN	NaN	0	NaN	9881	3600	13482
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13497	34.922	NaN	2410.2	30	0	464.76	0.215	+			15951	HAGLVYEY	8	53	476.2319558462451	950.4493587592902	2	476.2323303222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HAGLVYEY_	ENSG00000132141|ENST00000314144|CCT6B;ENSG00000146731|ENST00000275603|CCT6A;ENST00000492618.5_1_7:56127237-56129562:+|nuORF;ENST00000577307.1_1_17:33266566-33269658:-|nuORF;nc|ENSG00000132141|Q92526-2|CCT6B;nc|ENSG00000132141|Q92526-3|CCT6B;nc|ENSG00000146731|P40227-2|CCT6A	37.028477286268924	0.6747514403204248	4				NaN	NaN	0	NaN	9892	3603	13496
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13498	34.926	NaN	1191.8	30	0	442.9	0.035			+	18211	IMWIQHVP	8	48	512.2776489257812	NaN	0	512.2776489257812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IMWIQHVP_	REV__ENST00000325083.12_1_8:17815084-17817658:+|nuORF	37.028477286268924	1.7418937515398478	4				NaN	NaN	0	NaN	9893	3603	13496
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13513	34.957	NaN	7609.6	30	0	3043.1	0.214				-1	 	0	34	379.2095318105949	756.4045106879898	2	379.2098083496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9905	3606	13512
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13514	34.961	NaN	5356.7	30	0	714.11	0.034	+			1908	AIQLPISSK	9	56	478.79236932081136	955.5701857084227	2	478.7926025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AIQLPISSK_	ENST00000518468.1_3_8:53599460-53658116:-|nuORF	52.936696900407355	0.27249468807391813	4				NaN	NaN	0	NaN	9906	3606	13512
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13531	34.996	NaN	2186.8	30	0	390.58	0.214	+			25390	LPIEAPIRM	9	51	528.2995358984075	1054.584518863615	2	528.298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LPIEAPIRM(Oxidation (M))_	ENSG00000198712|ENST00000361739|MT-CO2	52.936696900407355	0.27249468807391813	4				NaN	NaN	0	NaN	9920	3609	13530
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13532	35	NaN	3352.1	30	0	1531.3	0.032			+	44467	TSPWGGVI	8	40	408.71615696463215	815.4177609960643	2	408.7160339355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TSPWGGVI_	REV__ENST00000393818.2_2_17:40716095-40716503:+|nuORF;REV__ENST00000591753.1_2_17:40716095-40716197:+|nuORF	29.841539824830324	0.7289191502596711	4				NaN	NaN	0	NaN	9921	3609	13530
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13544	35.025	NaN	3136.7	30	0	508.98	0.214	+			33411	RIGGISGIFK	10	58	524.3192092377896	1046.623865542379	2	524.31884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RIGGISGIFK_	DBR1|p.S129F|1|0.37|ENSG00000138231|chr3:138171650-138171650|G/A|missense_variant;DBR1|p.S224Lfs*6|1|0.26|ENSG00000138231|chr3:138167125-138167125|A/-|frameshift_variant;DBR1|p.Y142Lfs*2|1|0.38|ENSG00000138231|chr3:138170173-138170174|-/G|frameshift_variant;ENSG00000138231|ENST00000260803|DBR1;ENST00000463982.2_1_3:137890290-137893637:-|nuORF	70.41160668669231	0.27395730963879994	4				NaN	NaN	0	NaN	9930	3612	13543
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13545	35.029	NaN	1231.5	30	0	81.512	0.106	+			29415	PAWTFDIN	8	48	482.23191505904424	962.4492771848885	2	482.2309265136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PAWTFDIN_	FAM171B|p.M296I|1|0.37|ENSG00000144369|chr2:186751297-186751297|G/T|missense_variant	40.5726180659479	0.6527593143185008	4				NaN	NaN	0	NaN	9931	3612	13543
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13546	35.031	NaN	2884.9	30	0	729.69	0.035	+			29676	PGRAGVPGLR	10	58	490.2948008680365	978.575048802873	2	490.79559326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PGRAGVPGLR_	COL16A1|p.K598R|1|0.4|ENSG00000084636|chr1:31688477-31688477|T/C|missense_variant	40.77816245573522	0.5419747034533848	4				NaN	NaN	0	NaN	9932	3612	13543
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13561	35.063	NaN	15693	30	0	2314.6	0.214			+	13475	GLLGATAIIK	10	72	478.8106493372739	955.6067457413478	2	478.8109436035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GLLGATAIIK_	REV__tr|U7ST96|U7ST96_FUSNUHeavymetaltranslocatingP-typeATPaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01272PE=3SV=1	93.1432384553994	0.11307820852620741	4				NaN	NaN	0	NaN	9944	3615	13560
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13562	35.066	NaN	1106.2	30	0	238.5	0.037	+			42455	TAMDVVYALK	10	46	563.7956981539716	NaN	0	563.7955932617188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_TAM(Oxidation (M))DVVYALK_	ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2	47.95952297671804	0.31850267256932663	4				NaN	NaN	0	NaN	9945	3615	13560
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13578	35.1	NaN	10959	30	0	3670	0.214	+			4589	ATLGDLKLVEK	11	41	396.23950440386125	1185.6966838117837	3	396.239501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATLGDLKLVEK_	ENSG00000129083|ENST00000439561|COPB1	37.81151784470057	0.5878881669006212	4				NaN	NaN	0	NaN	9958	3618	13577
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13579	35.103	NaN	1668.2	30	0	203.58	0.106			+	-1	KTTLIKVMK	9	60	539.3371079836804	1076.6596630341608	2	539.3380126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_KTTLIKVM(Oxidation (M))K_	REV__DNAH11|p.A2559Sfs*4|1|0.42|ENSG00000105877|chr7:21738723-21738724|-/A|frameshift_variant;REV__DNAH11|p.A4348Tfs*8|1|0.06|ENSG00000105877|chr7:21894990-21894991|-/CACTTTA|frameshift_variant;REV__DNAH11|p.C1251Mfs*5|1|0.41|ENSG00000105877|chr7:21606521-21606522|-/A|frameshift_variant;REV__DNAH11|p.C1849Sfs*8|1|0.05|ENSG00000105877|chr7:21683868-21683869|-/CTAAAATTCTCATAAATAG|frameshift_variant;REV__DNAH11|p.E3097Nfs*4|1|0.21|ENSG00000105877|chr7:21773946-21773946|A/-|frameshift_variant;REV__DNAH11|p.K1250Nfs*43|1|0.63|ENSG00000105877|chr7:21606522-21606522|A/-|frameshift_variant;REV__DNAH11|p.K873Nfs*4|1|0.31|ENSG00000105877|chr7:21591523-21591523|A/-|frameshift_variant;REV__DNAH11|p.L3180Sfs*6|1|0.05|ENSG00000105877|chr7:21784481-21784482|-/CAGA|frameshift_variant;REV__DNAH11|p.L441Ifs*25|1|0.26|ENSG00000105877|chr7:21570187-21570188|-/A|frameshift_variant;REV__DNAH11|p.N2201Kfs*6|1|0.04|ENSG00000105877|chr7:21707754-21707755|-/AGTAAAAGATTTC|frameshift_variant;REV__DNAH11|p.N3090Kfs*2|1|0.09|ENSG00000105877|chr7:21773928-21773929|-/A|frameshift_variant;REV__DNAH11|p.N833Tfs*2|1|0.17|ENSG00000105877|chr7:21591404-21591404|A/-|frameshift_variant;REV__DNAH11|p.Q945Kfs*4|1|0.32|ENSG00000105877|chr7:21599946-21599946|T/-|frameshift_variant;REV__DNAH11|p.S2374Qfs*2|1|0.14|ENSG00000105877|chr7:21717910-21717911|-/C|frameshift_variant;REV__DNAH11|p.S312N|1|0.23|ENSG00000105877|chr7:21561123-21561123|G/A|missense_variant;REV__DNAH11|p.T4414Nfs*34|1|0.37|ENSG00000105877|chr7:21900050-21900051|-/A|frameshift_variant;REV__DNAH11|p.T4414Qfs*72|3|0.34|ENSG00000105877|chr7:21900051-21900051|A/-|frameshift_variant;REV__DNAH11|p.W2255Mfs*9|1|0.04|ENSG00000105877|chr7:21710627-21710628|-/A|frameshift_variant;REV__ENSG00000105877|ENST00000409508|DNAH11	26.69291269510374	0.5537881896960711	4				NaN	NaN	0	NaN	9959	3618	13577
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13580	35.105	NaN	1361.9	30	0	234.38	0.034	+			11136	FGAFYIPL	8	42	464.25139358042304	NaN	0	464.25164794921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FGAFYIPL_	ENSG00000178394|ENST00000323865|HTR1A;ENSG00000179097|ENST00000319595|HTR1F;HTR1F|p.F310Lfs*2|2|0.41|ENSG00000179097|chr3:87991673-87991673|T/-|frameshift_variant;HTR1F|p.L332Wfs*11|1|0.39|ENSG00000179097|chr3:87991739-87991739|T/-|frameshift_variant	43.626045697637714	1.7418937515398478	4				NaN	NaN	0	NaN	9960	3618	13577
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13593	35.133	NaN	7469	30	0	1675.7	0.214			+	-1	VTLMKLILQ	9	59	358.8911678111092	1073.6516740335276	3	358.8916320800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_VTLM(Oxidation (M))KLILQ_	REV__ENSG00000188906|ENST00000298910|LRRK2;REV__LRRK2|p.A352Tfs*4|1|0.06|ENSG00000188906|chr12:40251327-40251333|GCCTGTT/-|frameshift_variant;REV__LRRK2|p.I435Yfs*9|1|0.39|ENSG00000188906|chr12:40257258-40257258|A/-|frameshift_variant;REV__LRRK2|p.K1328Rfs*8|1|0.21|ENSG00000188906|chr12:40308485-40308485|A/-|frameshift_variant;REV__LRRK2|p.K535Nfs*13|2|0.28|ENSG00000188906|chr12:40263845-40263845|A/-|frameshift_variant;REV__LRRK2|p.K906Rfs*8|1|0.29|ENSG00000188906|chr12:40293568-40293568|A/-|frameshift_variant;REV__LRRK2|p.L818Dfs*10|1|0.07|ENSG00000188906|chr12:40284084-40284085|-/GACTGCT|frameshift_variant;REV__LRRK2|p.N2261Kfs*9|1|0.28|ENSG00000188906|chr12:40356119-40356120|-/A|frameshift_variant;REV__LRRK2|p.N710Mfs*2|1|0.49|ENSG00000188906|chr12:40278144-40278144|A/-|frameshift_variant;REV__LRRK2|p.R1639Gfs*15|1|0.59|ENSG00000188906|chr12:40320068-40320068|A/-|frameshift_variant;REV__LRRK2|p.R1639Kfs*13|1|0.36|ENSG00000188906|chr12:40320067-40320068|-/A|frameshift_variant	53.08895987439943	0.27122541748218487	4				NaN	NaN	0	NaN	9970	3621	13592
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13594	35.136	NaN	3823.9	30	0	774.67	0.106	+			48486	VTMKEILLK	9	66	537.8332407731812	1073.6519286131622	2	537.8338012695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTMKEILLK_	ENSG00000119487|ENST00000265960|MAPKAP1;nc|ENSG00000119487|Q9BPZ7-2|MAPKAP1;nc|ENSG00000119487|Q9BPZ7-3|MAPKAP1;nc|ENSG00000119487|Q9BPZ7-4|MAPKAP1;nc|ENSG00000119487|Q9BPZ7-5|MAPKAP1;nc|ENSG00000119487|Q9BPZ7-6|MAPKAP1	141.52041321563706	0.009766778904176347	4				NaN	NaN	0	NaN	9971	3621	13592
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13595	35.138	NaN	2311.5	30	0	479.15	0.106			+	27838	MSVWVKVL	8	59	481.28191100532274	960.5492690774455	2	481.28192138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MSVWVKVL_	REV__nc|ENSG00000242485|Q9BYC9-2|MRPL20	60.97194046774394	0.49215940876911696	4				NaN	NaN	0	NaN	9972	3621	13592
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13596	35.14	NaN	529.63	30	0	73.369	0.036			+	-1	PCCFLPLLP	9	36	558.7850952148438	NaN	0	558.7850952148438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_PC(Carbamidomethyl (C))C(Carbamidomethyl (C))FLPLLP_	REV__nc|ENSG00000172367|Q86UT5-4|NHERF4;REV__nc|ENSG00000172367|Q86UT5|NHERF4	21.70233525837049	0.3635294413921169	4				NaN	NaN	0	NaN	9973	3621	13592
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13612	35.173	NaN	2745	30	0	483.98	0.214	+			35910	SEFPAARL	8	52	445.7401390366843	889.4657251401686	2	445.73974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEFPAARL_	BCOR|p.K1061Sfs*52|1|0.28|ENSG00000183337|chrX:40071029-40071029|T/-|frameshift_variant;BCOR|p.K839Qfs*5|1|0.26|ENSG00000183337|chrX:40072831-40072832|-/G|frameshift_variant;BCOR|p.K839Sfs*17|1|0.41|ENSG00000183337|chrX:40072832-40072832|G/-|frameshift_variant;BCOR|p.L1646Sfs*28|1|0.06|ENSG00000183337|chrX:40053926-40053926|G/-|frameshift_variant;BCOR|p.L487Hfs*13|1|0.67|ENSG00000183337|chrX:40073886-40073887|-/GTGT|frameshift_variant;BCOR|p.N529Tfs*60|1|0.51|ENSG00000183337|chrX:40073760-40073760|T/-|frameshift_variant;BCOR|p.P1621Qfs*53|2|0.52|ENSG00000183337|chrX:40054000-40054000|G/-|frameshift_variant;BCOR|p.R1215Kfs*30|1|0.14|ENSG00000183337|chrX:40063811-40063812|-/T|frameshift_variant;ENSG00000183337|ENST00000378444|BCOR;ENST00000490976.5_1_X:39931586-39937182:-|nuORF;nc|ENSG00000183337|Q6W2J9-2|BCOR;nc|ENSG00000183337|Q6W2J9-3|BCOR;nc|ENSG00000183337|Q6W2J9-4|BCOR	42.396135135203025	0.6414440140393314	4				NaN	NaN	0	NaN	9986	3624	13611
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13613	35.177	NaN	1795.5	30	0	313.15	0.106	+			17817	IEWTLEQL	8	58	516.2762901309554	1030.5380273287108	2	516.2765502929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IEWTLEQL_	DRP2|p.R228W|1|0.14|ENSG00000102385|chrX:101241790-101241790|C/T|missense_variant	82.24051045832904	0.30490469762271794	4				NaN	NaN	0	NaN	9987	3624	13611
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13614	35.179	NaN	1278.2	30	0	190.59	0.106	+			47261	VMSATFAKF	9	50	509.2570961972119	NaN	0	509.2566833496094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_VM(Oxidation (M))SATFAKF_	ENSG00000077380|ENST00000397119|DYNC1I2;ENST00000435916.1_1_10:52025510-52026503:+|nuORF;ENST00000479806.1_1_2:172583261-172604396:+|nuORF;nc|ENSG00000077380|Q13409-2|DYNC1I2;nc|ENSG00000077380|Q13409-3|DYNC1I2;nc|ENSG00000077380|Q13409-5|DYNC1I2;nc|ENSG00000077380|Q13409-6|DYNC1I2;nc|ENSG00000077380|Q13409-7|DYNC1I2	62.107414245175825	0.1403307765918332	4				NaN	NaN	0	NaN	9988	3624	13611
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13615	35.181	NaN	1722.2	30	0	277.03	0.106	+			25465	LPQVQNTAM	9	50	501.25839289110326	1000.5022328490065	2	501.25787353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LPQVQNTAM_	ENSG00000173933|ENST00000310092|RBM4;nc|ENSG00000239306|Q96PK6-5|RBM14	51.19269402634007	0.2889735674168909	4				NaN	NaN	0	NaN	9989	3624	13611
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13616	35.182	NaN	996.27	30	0	139.33	0.035	+			11353	FLGFASEASL	10	48	521.2681703131727	NaN	0	521.2678833007812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FLGFASEASL_	ENST00000307149.9_1_16:23464350-23464488:-|nuORF	40.77816245573522	0.36390427802201647	4				NaN	NaN	0	NaN	9990	3624	13611
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13630	35.212	NaN	3063.9	30	0	691.13	0.214	+			42783	TEAGALHVL	9	60	455.75365477668555	909.4927566201711	2	455.7532958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEAGALHVL_	ENSG00000105639|ENST00000458235|JAK3;ENST00000526008.5_1_19:17949989-17958765:-|nuORF;ENST00000527031.5_1_19:17947866-17955268:-|nuORF;ENST00000528293.1_1_19:17953965-17958870:-|nuORF;JAK3|p.Q39Pfs*13|1|0.25|ENSG00000105639|chr19:17844302-17844303|-/G|frameshift_variant;JAK3|p.Q39Sfs*108|1|0.12|ENSG00000105639|chr19:17844303-17844303|G/-|frameshift_variant;nc|ENSG00000105639|P52333-2|JAK3;nc|ENSG00000105639|P52333-4|JAK3	94.00642277110589	0.05356993013874309	4				NaN	NaN	0	NaN	10001	3627	13629
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13631	35.216	NaN	1420.8	30	0	210.33	0.034	+			17430	IATNGTPEL	9	49	458.24292963595394	NaN	0	458.2428283691406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IATNGTPEL_	ENSG00000077264|ENST00000372007|PAK3;ENSG00000149269|ENST00000356341|PAK1;ENSG00000180370|ENST00000327134|PAK2;nc|ENSG00000077264|O75914-3|PAK3;nc|ENSG00000077264|O75914-4|PAK3;nc|ENSG00000077264|O75914|PAK3;nc|ENSG00000149269|Q13153-2|PAK1;PAK2|p.R488Gfs*13|1|0.32|ENSG00000180370|chr3:196827302-196827302|A/-|frameshift_variant	69.6276240434122	0.10825701912424071	4				NaN	NaN	0	NaN	10002	3627	13629
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13647	35.249	NaN	2338.6	30	0	329.87	0.143				-1	 	0	47	490.2641379925067	489.2568615259067	1	490.26507568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10015	3630	13646
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13676	35.314	NaN	7781.3	30	0	1402.3	0.214	+			44945	TVATAVEQY	9	62	491.2479498075497	980.4813466818994	2	491.2480163574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVATAVEQY_	ENSG00000116209|ENST00000234831|TMEM59	167.22876102047192	0.0032399547248545047	4				NaN	NaN	0	NaN	10038	3636	13675
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13677	35.317	NaN	16859	30	0	1702	0.106	+			4668	ATLQYIVGR	9	84	510.7954491447573	1019.5763453563146	2	510.7966003417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATLQYIVGR_	ENSG00000085377|ENST00000652536|PREP;PREP|p.L670Cfs*20|1|0.16|ENSG00000085377|chr6:105278269-105278269|G/-|frameshift_variant	172.24860141594272	0.002383092361811508	4				NaN	NaN	0	NaN	10039	3636	13675
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13678	35.319	NaN	3787.6	30	0	976.05	0.106	+			18303	IPQQSGALY	9	57	488.7587125668447	975.5028722004894	2	488.759033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IPQQSGALY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	54.776311868738084	0.25715957988447635	4				NaN	NaN	0	NaN	10040	3636	13675
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13679	35.321	NaN	3185.7	30	0	1506.3	0.106	+			9923	EQTFILKG	8	61	468.2631081290295	934.511663324859	2	468.263427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EQTFILKG_	ENSG00000136643|ENST00000366960|RPS6KC1;nc|ENSG00000136643|Q96S38-2|RPS6KC1;RPS6KC1|p.F1056Lfs*9|1|0.05|ENSG00000136643|chr1:213272596-213272596|T/-|frameshift_variant	66.42927471994793	0.4381325844043345	4				NaN	NaN	0	NaN	10041	3636	13675
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13680	35.323	NaN	2255.4	30	0	334.92	0.034			+	5356	ATVVEETAV	9	52	459.74275729116545	917.4709616491309	2	459.7430419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATVVEETAV_	REV__ENSG00000104064|ENST00000380877|GABPB1;REV__nc|ENSG00000104064|Q06547-3|GABPB1;REV__nc|ENSG00000104064|Q06547-4|GABPB1;REV__nc|ENSG00000104064|Q06547|GABPB1	73.97473282117947	0.12360187025703594	4				NaN	NaN	0	NaN	10042	3636	13675
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13693	35.35	NaN	3010.9	30	0	844.01	0.214	+			23507	LAGTTVTIV	9	54	437.76582393188465	873.5170949305693	2	437.765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LAGTTVTIV_	ENSG00000158113|ENST00000339777|LRRC43;LRRC43|p.I561Sfs*10|2|0.27|ENSG00000158113|chr12:122200799-122200799|C/-|frameshift_variant;nc|ENSG00000158113|Q8N309-2|LRRC43;nc|ENSG00000158113|Q8N309-3|LRRC43	55.50420428727701	0.2510918378945873	4				NaN	NaN	0	NaN	10052	3639	13692
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13694	35.354	NaN	1585.1	30	0	503.69	0.035	+			28841	NPSSNFESM	9	41	506.705706142734	1011.396859352268	2	506.7054443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NPSSNFESM_	ENSG00000124766|ENST00000244745|SOX4	64.20726635412375	0.17854274437659667	4				NaN	NaN	0	NaN	10053	3639	13692
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13706	35.379	NaN	17842	30	0	2797.6	0.214	+			10993	FEGKTLVSV	9	74	490.2764937968125	978.538434660425	2	490.2762756347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FEGKTLVSV_	ENSG00000080824|ENST00000216281|HSP90AA1;ENST00000378770.1_1_4:190394307-190396341:+|nuORF;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000205100|Q58FG1|HSP90AA4P	85.86182877749512	0.07653218437724067	4				NaN	NaN	0	NaN	10062	3642	13705
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13707	35.383	NaN	2894.3	30	0	546.33	0.106	+			46227	VEAPMPKL	8	49	442.7493349445533	883.4841169559066	2	442.74896240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VEAPMPKL_	ENSG00000106211|ENST00000248553|HSPB1;ENST00000423240.1_1_9:74622799-74623024:-|nuORF	58.78195531508484	0.5138399468736706	4				NaN	NaN	0	NaN	10063	3642	13705
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13708	35.385	NaN	1962.1	30	0	245.17	0.035	+			18489	ISGNVYILK	9	51	503.80000576380974	NaN	0	503.79998779296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ISGNVYILK_	ENSG00000129534|ENST00000310806|MIS18BP1;MIS18BP1|p.K1063Nfs*18|1|0.14|ENSG00000129534|chr14:45206134-45206134|T/-|frameshift_variant;MIS18BP1|p.S991Nfs*17|1|0.35|ENSG00000129534|chr14:45217046-45217050|TGTAC/-|frameshift_variant;MIS18BP1|p.V839Sfs*20|1|0.14|ENSG00000129534|chr14:45224073-45224073|G/-|frameshift_variant	58.22992032128504	0.15686832049467786	4				NaN	NaN	0	NaN	10064	3642	13705
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13724	35.418	NaN	2991.4	30	0	518.16	0.214	+			31603	QLVDAFLKL	9	62	523.8183523368573	NaN	0	523.8181762695312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QLVDAFLKL_	ENSG00000198690|ENST00000362065|FAN1;ENST00000565280.5_1_15:31198658-31229456:+|nuORF;nc|ENSG00000198690|Q9Y2M0-2|FAN1	79.71258880314673	0.07236858429579222	4				NaN	NaN	0	NaN	10077	3645	13723
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13725	35.422	NaN	6462.5	30	0	1662.2	0.106	+			5552	AVALPVAVGR	10	65	476.8007321995917	951.5869114659835	2	476.8000793457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVALPVAVGR_	ENSG00000275395|ENST00000616721|FCGBP;nc|ENSG00000275395|Q9Y6R7|FCGBP	71.29570347882199	0.26673431503403816	4				NaN	NaN	0	NaN	10078	3645	13723
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13726	35.424	NaN	1230.4	30	0	294.56	0.106	+			50791	YENPTYKF	8	56	531.2498831144683	1060.4852132957365	2	531.2503662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YENPTYKF_	APP|p.Q767R|1|0.1|ENSG00000142192|chr21:25881683-25881683|T/C|missense_variant;ENSG00000142192|ENST00000346798|APP;nc|ENSG00000142192|P05067-10|APP;nc|ENSG00000142192|P05067-11|APP;nc|ENSG00000142192|P05067-3|APP;nc|ENSG00000142192|P05067-4|APP;nc|ENSG00000142192|P05067-5|APP;nc|ENSG00000142192|P05067-6|APP;nc|ENSG00000142192|P05067-7|APP;nc|ENSG00000142192|P05067-8|APP;nc|ENSG00000142192|P05067-9|APP	45.9519527083369	0.6193794311207887	4				NaN	NaN	0	NaN	10079	3645	13723
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13727	35.426	NaN	996.76	30	0	185.97	0.036			+	39882	STLPSQINLK	10	51	550.8193359375	NaN	0	550.8193359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STLPSQINLK_	REV__ENSG00000127511|ENST00000248054|SIN3B;REV__nc|ENSG00000127511|O75182-3|SIN3B;REV__nc|ENSG00000127511|O75182|SIN3B;REV__SIN3B|p.F776Lfs*21|1|0.31|ENSG00000127511|chr19:16869880-16869880|T/-|frameshift_variant;REV__SIN3B|p.P742Qfs*55|1|0.37|ENSG00000127511|chr19:16869777-16869777|C/-|frameshift_variant	40.05817265558897	0.3684561582319974	4				NaN	NaN	0	NaN	10080	3645	13723
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13742	35.457	NaN	2252.5	30	0	355.45	0.214	+			41096	SVINPGAIYR	10	58	545.3069097961074	1088.5992666590148	2	545.307861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVINPGAIYR_	ENSG00000115232|ENST00000397033|ITGA4;ENST00000465522.5_1_2:182322141-182350724:+|nuORF;ENST00000476089.1_1_2:182321937-182323202:+|nuORF;ENST00000484404.1_1_2:182322441-182339919:+|nuORF;ITGA4|p.T615Nfs*11|1|0.22|ENSG00000115232|chr2:181509798-181509799|-/A|frameshift_variant;nc|ENSG00000115232|P13612-2|ITGA4	65.46538089061403	0.31613324008013116	4				NaN	NaN	0	NaN	10092	3648	13741
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13743	35.461	NaN	2298.4	30	0	1075.1	0.035	+			28158	NAMEDAQTL	9	46	496.72202414296567	NaN	0	496.7222595214844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NAMEDAQTL_	ENSG00000196975|ENST00000394295|ANXA4;nc|ENSG00000196975|P09525|ANXA4	42.86426827375447	0.2558691296974908	4				NaN	NaN	0	NaN	10093	3648	13741
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13755	35.486	NaN	1774.3	30	0	568.86	0.214	+			30499	QAFGEKITM	9	53	512.7607058290063	1023.5068587248126	2	512.7611694335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QAFGEKITM_	ENSG00000137575|ENST00000260130|SDCBP;ENST00000424643.3_1_8:70855645-70855750:+|nuORF;ENST00000519115.5_1_8:59477592-59490768:+|nuORF;ENST00000523441.1_1_8:59490633-59492419:+|nuORF;nc|ENSG00000137575|O00560-2|SDCBP;nc|ENSG00000137575|O00560-3|SDCBP	53.08895987439943	0.27122541748218487	4				NaN	NaN	0	NaN	10102	3651	13754
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13756	35.49	NaN	3066.9	30	0	1183	0.106				-1	RSLEMGLL	8	54	467.7536051994281	NaN	0	467.753662109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_RSLEM(Oxidation (M))GLL_	ENSG00000213096|ENST00000357002|ZNF254;nc|ENSG00000213096|O75437-2|ZNF254;ZNF254|p.P5T|1|0.45|ENSG00000213096|chr19:24087320-24087320|C/A|missense_variant	50.0245360154114	1.7418937515398478	4				NaN	NaN	0	NaN	10103	3651	13754
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13757	35.492	NaN	2466.8	30	0	231.1	0.106	+			8380	EAMQAAVQY	9	68	505.7345225710798	1009.4544922089597	2	505.7339172363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EAMQAAVQY_	DST|p.K5076Nfs*24|1|0.31|ENSG00000151914|chr6:56472218-56472218|T/-|frameshift_variant;DST|p.T4428Nfs*23|1|0.12|ENSG00000151914|chr6:56497896-56497897|-/T|frameshift_variant;ENSG00000151914|ENST00000680361|DST;nc|ENSG00000151914|Q03001-14|DST;nc|ENSG00000151914|Q03001-8|DST;nc|ENSG00000151914|Q03001|DST	85.16082228582465	0.07850854922700509	4				NaN	NaN	0	NaN	10104	3651	13754
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13758	35.494	NaN	4213.1	30	0	935.85	0.034	+			6386	AVVELVTVK	9	56	479.30277141932675	956.5909899054535	2	479.3042907714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVVELVTVK_	ENSG00000182220|ENST00000636580|ATP6AP2;nc|ENSG00000182220|O75787-2|ATP6AP2	109.47833844074708	0.029530294723441826	4				NaN	NaN	0	NaN	10105	3651	13754
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13775	35.528	NaN	8695.3	30	0	2818.1	0.214	+			38160	SQAPVRILP	9	71	490.798137302725	979.5817216722501	2	490.7982482910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SQAPVRILP_	ENST00000440097.5_1_3:45636669-45636975:+|nuORF	56.72105179125745	0.24094814563026265	4				NaN	NaN	0	NaN	10119	3654	13774
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13776	35.532	NaN	2569.4	30	0	899.95	0.106	+			45031	TVGAFFASK	9	49	464.2504970973539	926.4864412615078	2	464.2506408691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVGAFFASK_	ENSG00000129473|ENST00000250405|BCL2L2	46.45678178249821	0.34452392205506005	4				NaN	NaN	0	NaN	10120	3654	13774
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13777	35.534	NaN	2803.2	30	0	408.54	0.106			+	48517	VTNIVTAKY	9	68	504.7903202254219	1007.5660875176438	2	504.7909240722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTNIVTAKY_	REV__L1MB4_dup8351|chr19:41723964-41725199:-|4.338323541633806|0.1814582314154843|4.58|482.0|37|3|sense	36.446750945000026	0.4619375763483977	4				NaN	NaN	0	NaN	10121	3654	13774
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13778	35.536	NaN	1410.5	30	0	161.8	0.034			+	2193	ALNVLLGIAG	10	50	470.7950552870412	NaN	0	470.79547119140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ALNVLLGIAG_	REV__RXFP4|p.G56V|1|0.24|ENSG00000173080|chr1:155941876-155941876|G/T|missense_variant	37.15910966729921	0.3781637092648983	4				NaN	NaN	0	NaN	10122	3654	13774
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13794	35.568	NaN	7119.9	30	0	2175.3	0.214	+			39900	STLTDSLVCK	10	67	533.7765792544411	1065.5386055756821	2	533.7767333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STLTDSLVCK_	EEF2|p.E241Rfs*13|1|0.26|ENSG00000167658|chr19:3982316-3982316|C/-|frameshift_variant;ENSG00000167658|ENST00000309311|EEF2;ENST00000594885.1_1_19:3984132-3985378:-|nuORF	109.47833844074708	0.04954876308859735	4				NaN	NaN	0	NaN	10135	3657	13793
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13795	35.572	NaN	3688.1	30	0	502.73	0.106	+			44004	TPIEGMLSH	9	66	492.7444320506788	983.4743111681577	2	492.7441101074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TPIEGMLSH_	ENSG00000170515|ENST00000303305|PA2G4;nc|ENSG00000170515|Q9UQ80-2|PA2G4;PA2G4|p.K373Efs*19|1|0.43|ENSG00000170515|chr12:56111517-56111518|-/A|frameshift_variant;PA2G4|p.T200Pfs*58|1|0.29|ENSG00000170515|chr12:56109899-56109899|A/-|frameshift_variant	108.08749611321984	0.03094949498378333	4				NaN	NaN	0	NaN	10136	3657	13793
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13796	35.574	NaN	945.39	30	0	176.62	0.035			+	-1	KGCEKCSY	8	42	516.2199100007058	NaN	0	516.2198486328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_KGC(Carbamidomethyl (C))EKC(Carbamidomethyl (C))SY_	REV__ENSG00000184939|ENST00000563169|ZFP90;REV__ENSG00000267041|ENST00000591344|ZNF850;REV__ENST00000571720.2_1_16:68596924-68598598:+|nuORF;REV__ZFP90|p.N617Kfs*10|1|0.27|ENSG00000184939|chr16:68564632-68564633|-/A|frameshift_variant	35.61828744233558	1.7418937515398478	4				NaN	NaN	0	NaN	10137	3657	13793
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13809	35.601	NaN	2572.1	30	0	299.02	0.214	+			19682	KDPLTSVSY	9	59	505.2635638449204	NaN	0	505.2635498046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KDPLTSVSY_	ENSG00000260314|ENST00000569591|MRC1;MRC1|p.Q384Lfs*12|1|0.03|ENSG00000260314|chr10:17849663-17849664|-/TTTAAAAGATTTGATTAAAA|frameshift_variant;nc|ENSG00000260314|P22897-2|MRC1	64.20726635412375	0.13137488984569443	4				NaN	NaN	0	NaN	10147	3660	13808
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13810	35.605	NaN	2166.4	30	0	367.04	0.106	+			44374	TSLASVLKI	9	65	466.29501099286614	930.5754690525323	2	466.2948913574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TSLASVLKI_	ENST00000470296.5_1_3:48964979-48999061:+|nuORF	60.11826168202944	0.21262886028301267	4				NaN	NaN	0	NaN	10148	3660	13808
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13811	35.607	NaN	3792.6	30	0	2548.1	0.106				-1	 	0	42	379.2097344911711	756.4049160491422	2	379.2099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10149	3660	13808
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13812	35.608	NaN	870.04	30	0	175.92	0.036			+	24759	LHVAGQLVLQ	10	41	539.3261315817264	NaN	0	539.3258056640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LHVAGQLVLQ_	REV__ENST00000379977.7_3_10:6008214-6019471:-|nuORF;REV__ENST00000525219.6_1_10:6008214-6019867:-|nuORF	27.047317107675042	0.41136583337917604	4				NaN	NaN	0	NaN	10150	3660	13808
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13823	35.634	NaN	2166	30	0	1051.3	0.214				-1	MKIHVLVM	8	48	501.7773478235556	1001.5401427139112	2	501.7769775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_M(Oxidation (M))KIHVLVM(Oxidation (M))_	ENST00000354386.10_1_14:58965663-58975311:+|nuORF	37.028477286268924	0.6747514403204248	4				NaN	NaN	0	NaN	10158	3663	13822
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13824	35.637	NaN	3480.5	30	0	937.85	0.106			+	-1	ETNLLIMIP	9	64	530.2919256623651	1058.56929839153	2	530.2921752929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_ETNLLIM(Oxidation (M))IP_	REV__ENSG00000254656|ENST00000649591|RTL1;REV__RTL1|p.Q1207Rfs*77|4|0.14|ENSG00000254656|chr14:100881170-100881170|G/-|frameshift_variant	71.87747018426188	0.13267044672804276	4				NaN	NaN	0	NaN	10159	3663	13822
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13825	35.639	NaN	3085.3	30	0	432.5	0.106	+			8739	EEFKGEIAV	9	59	511.26405641753496	1020.5135599018699	2	511.26422119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EEFKGEIAV_	ENSG00000119471|ENST00000398805|HSDL2;ENST00000480881.1_1_9:115179142-115201087:+|nuORF;nc|ENSG00000119471|Q6YN16-2|HSDL2	87.75429964447693	0.0711966946989736	4				NaN	NaN	0	NaN	10160	3663	13822
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13826	35.641	NaN	2735.3	30	0	864.79	0.034	+			42012	SVYSDIVGK	9	55	484.2589207319611	966.5032885307222	2	484.2591552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVYSDIVGK_	ENSG00000162065|ENST00000646147|TBC1D24;nc|ENSG00000162065|Q9ULP9-2|TBC1D24	87.69643885390035	0.07135982304947239	4				NaN	NaN	0	NaN	10161	3663	13822
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13841	35.672	NaN	2966.4	30	0	531.92	0.214	+			38714	SSLDVNVLK	9	55	487.77955991028955	973.5445668873791	2	487.77972412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSLDVNVLK_	ENSG00000179562|ENST00000321407|GCC1;GCC1|p.T633Afs*8|1|0.05|ENSG00000179562|chr7:127582446-127582447|-/CA|frameshift_variant	107.00750918261382	0.032051501805654005	4				NaN	NaN	0	NaN	10173	3666	13840
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13842	35.676	NaN	1608	30	0	936.96	0.106			+	45131	TVKPPPGAYS	10	36	508.77439097365783	1015.5342290141157	2	508.7742614746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVKPPPGAYS_	REV__ENSG00000168014|ENST00000334126|C2CD3;REV__ENST00000415191.6_1_11:73824618-73881837:-|nuORF;REV__nc|ENSG00000168014|Q4AC94-1|C2CD3;REV__nc|ENSG00000168014|Q4AC94-2|C2CD3;REV__nc|ENSG00000168014|Q4AC94-3|C2CD3;REV__nc|ENSG00000168014|Q4AC94-4|C2CD3	31.529811441608018	0.6223461015008678	4				NaN	NaN	0	NaN	10174	3666	13840
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13843	35.678	NaN	1251.6	30	0	156.52	0.106	+			48342	VTGGYAALI	9	46	432.74505825609066	863.4755635789813	2	432.74468994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTGGYAALI_	ENSG00000138095|ENST00000260665|LRPPRC	71.37791200682192	0.13483053934309522	4				NaN	NaN	0	NaN	10175	3666	13840
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13844	35.68	NaN	1310.9	30	0	210.73	0.034			+	9529	ELAQTGPSL	9	45	458.242958934925	914.47136493665	2	458.2432556152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ELAQTGPSL_	REV__ENST00000245441.9_2_14:51288794-51297818:-|nuORF	56.72105179125745	0.24094814563026265	4				NaN	NaN	0	NaN	10176	3666	13840
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13856	35.705	NaN	8952.7	30	0	1956.4	0.214	+			50646	YEDLKAEL	8	71	490.75030962526193	979.4860663173239	2	490.75067138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YEDLKAEL_	ENSG00000127831|ENST00000248444|VIL1	80.45461616416974	0.3197856089436126	4				NaN	NaN	0	NaN	10185	3669	13855
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13857	35.708	NaN	4310.4	30	0	343.95	0.037				-1	ITPEALSCSF	10	75	562.7682890316922	1123.5220251301844	2	562.7692260742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_ITPEALSC(Carbamidomethyl (C))SF_	ENSG00000122145|ENST00000373296|TBX22;nc|ENSG00000122145|Q9Y458-2|TBX22	101.60071028292904	0.07294315263144992	4				NaN	NaN	0	NaN	10186	3669	13855
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13872	35.74	NaN	2323.6	30	0	338.93	0.214			+	25687	LRGWGGPGAP	10	58	484.2589207319611	966.5032885307222	2	484.25823974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LRGWGGPGAP_	REV__ENST00000505456.6_1_17:48624586-48625477:+|nuORF	35.61828744233558	0.588957954432594	4				NaN	NaN	0	NaN	10198	3672	13871
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13873	35.743	NaN	1437.2	30	0	178.6	0.106	+			46228	VEAPMPKL	8	39	442.7493349445533	883.4841169559066	2	442.7486572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VEAPMPKL_	ENSG00000106211|ENST00000248553|HSPB1;ENST00000423240.1_1_9:74622799-74623024:-|nuORF	45.9519527083369	0.6193794311207887	4				NaN	NaN	0	NaN	10199	3672	13871
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13874	35.745	NaN	2335.5	30	0	441.71	0.106			+	27708	MQDQPQTV	8	54	473.71827864640244	945.4220043596049	2	473.7187194824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MQDQPQTV_	REV__ENSG00000154134|ENST00000397801|ROBO3;REV__nc|ENSG00000154134|Q96MS0-2|ROBO3;REV__ROBO3|p.D1059Tfs*9|1|0.29|ENSG00000154134|chr11:124878121-124878121|G/-|frameshift_variant;REV__ROBO3|p.P376Tfs*35|1|0.25|ENSG00000154134|chr11:124871098-124871099|-/C|frameshift_variant	49.536043120802724	0.597139409391072	4				NaN	NaN	0	NaN	10200	3672	13871
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13875	35.747	NaN	5004.3	30	0	793.09	0.106	+			28828	NPNSGDFRF	9	63	527.2414609047582	1052.4683688763164	2	527.2412719726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NPNSGDFRF_	ENSG00000131263|ENST00000332687|RLIM	114.8945686534367	0.024290463251177924	4				NaN	NaN	0	NaN	10201	3672	13871
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13876	35.749	NaN	1387.7	30	0	118.19	0.035	+			12355	GDPGGSAFLKV	11	54	524.2781495634571	NaN	0	524.2779541015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GDPGGSAFLKV_	ENSG00000061455|ENST00000407847|PRDM6;PRDM6|p.N450Tfs*67|1|0.26|ENSG00000061455|chr5:123170957-123170957|A/-|frameshift_variant	54.776311868738084	0.2810134756352116	4				NaN	NaN	0	NaN	10202	3672	13871
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13894	35.786	NaN	15968	30	0	3101.9	0.214	+			45280	TVQVYIITK	9	74	532.8211546783642	1063.6277564235284	2	532.8223266601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVQVYIITK_	ENSG00000114388|ENST00000232501|NPRL2;ENST00000479512.5_1_3:50387244-50387426:-|nuORF;ENST00000487632.5_1_3:50386870-50387426:-|nuORF	117.7056744995986	0.022588689529990102	4				NaN	NaN	0	NaN	10217	3675	13893
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13895	35.789	NaN	1594.1	30	0	395.34	0.036	+			21614	KPNKPLILAN	10	49	554.348525270652	1106.6824976081039	2	554.348876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KPNKPLILAN_	ENSG00000172586|ENST00000372833|CHCHD1	32.81241826257853	0.6118718159329168	4				NaN	NaN	0	NaN	10218	3675	13893
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13909	35.818	NaN	1380.3	30	0	286.41	0.142	+			18667	ISWFPLPP	8	51	478.767578125	NaN	0	478.767578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ISWFPLPP_	ENST00000519860.3_2_5:172324967-172325219:+|nuORF	29.841539824830324	1.7418937515398478	4				NaN	NaN	0	NaN	10229	3678	13908
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13925	35.852	NaN	2007.6	30	0	596.14	0.15			+	8570	EAWSLELYPRW	11	52	483.9105804762131	1448.7099120288394	3	483.91021728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EAWSLELYPRW_	REV__ENSG00000168517|ENST00000589230|HEXIM2	17.833141474888023	0.7869876583333034	4				NaN	NaN	0	NaN	10242	3681	13924
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13936	35.878	NaN	3662.5	30	0	609.64	0.214			+	34426	RTVEPPPL	8	55	454.76373018955724	907.5129074459145	2	454.7633361816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTVEPPPL_	REV__ENST00000581960.1_1_18:812149-812320:-|nuORF	35.200714571348534	0.6875396545722289	4				NaN	NaN	0	NaN	10250	3684	13935
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13937	35.882	NaN	736.8	30	0	84.575	0.106	+			2529	APVPTGEVY	9	40	466.73978472368276	NaN	0	466.7398376464844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_APVPTGEVY_	CANX|p.D436*|1|0.11|ENSG00000127022|chr5:179722918-179722919|-/T|frameshift_variant;ENSG00000127022|ENST00000247461|CANX;nc|ENSG00000127022|P27824-2|CANX	35.200714571348534	0.2998460331538257	4				NaN	NaN	0	NaN	10251	3684	13935
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13938	35.884	NaN	1151.8	30	0	167.82	0.106	+			28834	NPQVNEPLP	9	44	504.2622230937318	1006.5098932542636	2	504.2620544433594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NPQVNEPLP_	tr|U7T2D7|U7T2D7_FUSNUAutotransporterdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00531PE=4SV=1	47.95952297671804	0.32689736945648856	4				NaN	NaN	0	NaN	10252	3684	13935
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13939	35.886	NaN	1276.5	30	0	233.21	0.106			+	30064	PQGNVSVIY	9	53	488.7587125668447	975.5028722004894	2	488.75830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PQGNVSVIY_	REV__ENSG00000158106|ENST00000289013|RHPN1;REV__ENST00000522335.5_1_8:144462155-144464818:+|nuORF	40.77816245573522	0.41113185337114944	4				NaN	NaN	0	NaN	10253	3684	13935
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13940	35.888	NaN	1502.1	30	0	174.47	0.106				-1	VCAIFNCY	8	53	516.2204536017356	1030.426354270271	2	515.72314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))VCAIFNC(Carbamidomethyl (C))Y_	ENST00000282516.12_2_5:37049402-37051939:+|nuORF	35.200714571348534	0.6875396545722289	4				NaN	NaN	0	NaN	10254	3684	13935
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13941	35.889	NaN	860.59	30	0	121.14	0.035	+			2158	ALLLLTLAY	9	42	495.81585693359375	NaN	0	495.81585693359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ALLLLTLAY_	ENSG00000148795|ENST00000369887|CYP17A1	20.481830146152948	0.3676602570045296	4				NaN	NaN	0	NaN	10255	3684	13935
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13971	35.955	NaN	5092.6	30	0	1086	0.215	+			28843	NPTSSSEFY	9	63	516.2204536017356	1030.426354270271	2	516.220947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NPTSSSEFY_	AMOT|p.L850Cfs*59|1|0.13|ENSG00000126016|chrX:112779606-112779606|G/-|frameshift_variant;AMOT|p.P239Hfs*14|2|0.34|ENSG00000126016|chrX:112822411-112822411|G/-|frameshift_variant;AMOT|p.Q392Lfs*49|1|0.09|ENSG00000126016|chrX:112815575-112815576|-/TCCA|frameshift_variant;AMOT|p.S319Pfs*56|1|0.11|ENSG00000126016|chrX:112815796-112815796|C/-|frameshift_variant;ENSG00000126016|ENST00000371959|AMOT	66.42927471994793	0.16001998865088202	4				NaN	NaN	0	NaN	10279	3690	13970
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13972	35.958	NaN	1391	30	0	98.198	0.035	+			44098	TPVFGKGVAY	10	61	519.7852797664626	1037.5560065997252	2	519.7858276367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TPVFGKGVAY_	CYP51A1|p.L333Wfs*13|1|0.15|ENSG00000001630|chr7:92123208-92123208|A/-|frameshift_variant;ENSG00000001630|ENST00000003100|CYP51A1;ENST00000419457.1_1_13:29297642-29297861:-|nuORF;nc|ENSG00000001630|Q16850-2|CYP51A1	75.65223720490533	0.23114180991572172	4				NaN	NaN	0	NaN	10280	3690	13970
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13984	35.983	NaN	10484	30	0	3152.4	0.214	+			18049	IISTVEVLK	9	62	501.3160997910072	1000.6176466488145	2	501.3154602050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IISTVEVLK_	ENSG00000141279|ENST00000322157|NPEPPS;ENST00000530514.5_1_17:45668242-45699283:+|nuORF;ENST00000531486.1_1_17:45681241-45696545:+|nuORF;nc|ENSG00000141279|P55786-2|NPEPPS	72.87924865735499	0.12833875048249987	4				NaN	NaN	0	NaN	10289	3693	13983
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13985	35.987	NaN	862.8	30	0	89.869	0.037				-1	SDIWALGCVM	10	45	576.265625	NaN	0	576.265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SDIWALGC(Carbamidomethyl (C))VM_	ENSG00000145632|ENST00000274289|PLK2	24.20275056022122	0.4201028297492154	4				NaN	NaN	0	NaN	10290	3693	13983
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14000	36.017	NaN	1428.4	30	0	182.34	0.214	+			47734	VSGGILGII	9	42	414.76335412190355	NaN	0	414.7636413574219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSGGILGII_	tr|U7SLP3|U7SLP3_FUSNUV-typeATPsynthasesubunitIOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02120PE=3SV=1	71.37791200682192	0.10092813839350395	4				NaN	NaN	0	NaN	10302	3696	13999
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14001	36.02	NaN	1682.4	30	0	274.53	0.106	+			665	AEAIIHGL	8	42	412.2374734620443	NaN	0	412.237548828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEAIIHGL_	ENSG00000147601|ENST00000276603|TERF1;ENST00000583350.1_1_18:14377547-14378720:-|nuORF;nc|ENSG00000147601|P54274-2|TERF1	71.37791200682192	1.7418937515398478	4				NaN	NaN	0	NaN	10303	3696	13999
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14002	36.022	NaN	1105.7	30	0	249.24	0.032				-1	 	0	34	392.71600795164665	NaN	0	392.7158508300781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10304	3696	13999
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14027	36.078	NaN	2296.5	30	0	237.51	0.144	+			28860	NPWDNKAVY	9	57	553.7671033748002	1105.5196538164003	2	553.7681274414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NPWDNKAVY_	ENSG00000162298|ENST00000377190|SYVN1;ENST00000449943.5_1_11:64897669-64899838:-|nuORF;ENST00000529207.5_1_11:64898917-64899817:-|nuORF;nc|ENSG00000162298|Q86TM6-2|SYVN1;nc|ENSG00000162298|Q86TM6-3|SYVN1;SYVN1|p.N368Qfs*129|1|0.33|ENSG00000162298|chr11:65130663-65130664|-/G|frameshift_variant;SYVN1|p.N368Tfs*117|1|0.4|ENSG00000162298|chr11:65130664-65130664|G/-|frameshift_variant	49.536043120802724	0.308405419312776	4				NaN	NaN	0	NaN	10323	3702	14026
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14042	36.111	NaN	2507.4	30	0	351.75	0.214			+	18119	ILDSKDVVI	9	52	501.2973538727197	1000.5801548122395	2	501.2967224121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ILDSKDVVI_	REV__ENSG00000095627|ENST00000695399|TDRD1;REV__nc|ENSG00000095627|Q9BXT4-2|TDRD1;REV__nc|ENSG00000095627|Q9BXT4-3|TDRD1;REV__nc|ENSG00000095627|Q9BXT4-4|TDRD1	45.97224482568171	0.3502073465782774	4				NaN	NaN	0	NaN	10335	3705	14041
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14043	36.115	NaN	1079.1	30	0	127.65	0.034			+	26814	LVSSGGISVL	10	49	466.2760925292969	NaN	0	466.2760925292969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LVSSGGISVL_	REV__ENST00000565573.1_1_16:30900076-30905983:+|nuORF	42.396135135203025	0.3536752194735987	4				NaN	NaN	0	NaN	10336	3705	14041
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14080	36.2	NaN	1831.1	30	0	647.76	0.214	+			44575	TTATGVFSLK	10	51	512.7878026965968	1023.5610524599937	2	512.7879638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTATGVFSLK_	ENSG00000049768|ENST00000376207|FOXP3;nc|ENSG00000290184|Q9BZS1-2|FOXP3;nc|ENSG00000290184|Q9BZS1-3|FOXP3;nc|ENSG00000290184|Q9BZS1-4|FOXP3	53.08895987439943	0.42869529153390606	4				NaN	NaN	0	NaN	10364	3714	14079
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14081	36.204	NaN	1258.7	30	0	141.76	0.035	+			44096	TPTVIAVHY	9	51	500.776621913906	999.538690894612	2	500.777099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TPTVIAVHY_	C3|p.A1045Pfs*26|1|0.09|ENSG00000125730|chr19:6694452-6694452|C/-|frameshift_variant;CON__Q2UVX4;ENSG00000125730|ENST00000245907|C3	85.35947970620816	0.07794846947388434	4				NaN	NaN	0	NaN	10365	3714	14079
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14099	36.241	NaN	2243.4	30	0	300.89	0.214	+			50786	YENKALML	8	55	491.25718349805237	980.4998140629048	2	491.2572937011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YENKALML_	ENSG00000108679|ENST00000262776|LGALS3BP;ENST00000586720.5_1_17:76967660-76975958:-|nuORF;ENST00000587251.5_1_17:76967660-76972124:-|nuORF	40.77816245573522	0.6514838689002179	4				NaN	NaN	0	NaN	10380	3717	14098
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14100	36.244	NaN	1052.9	30	0	142.09	0.037			+	-1	PNKMFEEVK	9	42	569.2823343205512	NaN	0	569.2827758789062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_PNKM(Oxidation (M))FEEVK_	REV__tr|U7SXX5|U7SXX5_FUSNUToprimdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00872PE=4SV=1	25.57405402267927	0.3484490411150625	4				NaN	NaN	0	NaN	10381	3717	14098
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14118	36.28	NaN	10570	30	0	2878.6	0.214	+			45360	TVTAQILLK	9	58	493.8157308062413	985.6169086792826	2	493.8154602050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVTAQILLK_	ENSG00000178982|ENST00000248342|EIF3K;ENST00000514461.1_1_4:116964948-116965134:-|nuORF;ENST00000586932.5_1_19:39109833-39116793:+|nuORF;ENST00000593062.5_1_19:39109833-39121488:+|nuORF;nc|ENSG00000178982|Q9UBQ5-2|EIF3K	86.88156770896713	0.07365720931774442	4				NaN	NaN	0	NaN	10396	3720	14117
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14119	36.284	NaN	2822	30	0	1221.2	0.106	+			26130	LSPQKVTLY	9	59	524.8053991346588	1047.5962453361176	2	524.80615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSPQKVTLY_	ENSG00000160255|ENST00000652462|ITGB2;ENST00000498666.5_1_21:46314678-46340855:-|nuORF	37.15910966729921	0.4535818937225704	4				NaN	NaN	0	NaN	10397	3720	14117
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14120	36.286	NaN	1392.1	30	0	215.17	0.106	+			30567	QAMDVSNQL	9	42	503.23646629633964	1004.4583796594793	2	503.2369079589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QAMDVSNQL_	ENSG00000168765|ENST00000369836|GSTM4;ENST00000479578.5_1_1:110200431-110200590:+|nuORF;nc|ENSG00000168765|Q03013-2|GSTM4	75.04331003522576	0.118981335847003	4				NaN	NaN	0	NaN	10398	3720	14117
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14121	36.287	NaN	2479	30	0	607.1	0.034	+			40845	SVELVDIGK	9	53	480.2737822466548	NaN	0	480.2733154296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVELVDIGK_	ENSG00000133313|ENST00000324262|CNDP2;ENST00000582620.5_1_18:72167208-72179735:+|nuORF;nc|ENSG00000133313|Q96KP4-2|CNDP2	49.536043120802724	0.20989033510253738	4				NaN	NaN	0	NaN	10399	3720	14117
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14132	36.312	NaN	17392	30	0	2471.7	0.214	+			27101	MANGAVIHL	9	70	463.24948706165463	924.4844211901093	2	463.2494201660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MANGAVIHL_	ENSG00000099995|ENST00000215793|SF3A1;nc|ENSG00000099995|Q15459-2|SF3A1	180.49460243208492	0.0012463884455128954	4				NaN	NaN	0	NaN	10407	3723	14131
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14133	36.315	NaN	8497.8	30	0	2373.9	0.106	+			27687	MPVASSEASTL	11	62	546.7658888447435	1091.5172247562869	2	546.765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MPVASSEASTL_	ENSG00000169876|ENST00000306151|MUC17;ENSG00000169876|ENST00000306151|MUC17;ENSG00000169876|ENST00000306151|MUC17;MUC17|p.N4205Tfs*18|1|0.07|ENSG00000169876|chr7:101048918-101048918|A/-|frameshift_variant;MUC17|p.N4205Tfs*18|1|0.07|ENSG00000169876|chr7:101048918-101048918|A/-|frameshift_variant;MUC17|p.N4205Tfs*18|1|0.07|ENSG00000169876|chr7:101048918-101048918|A/-|frameshift_variant;MUC17|p.S3486Qfs*18|1|0.41|ENSG00000169876|chr7:101041869-101041870|-/C|frameshift_variant;MUC17|p.S3486Qfs*18|1|0.41|ENSG00000169876|chr7:101041869-101041870|-/C|frameshift_variant;MUC17|p.S3486Qfs*18|1|0.41|ENSG00000169876|chr7:101041869-101041870|-/C|frameshift_variant;nc|ENSG00000169876|Q685J3-2|MUC17;nc|ENSG00000169876|Q685J3-2|MUC17;nc|ENSG00000169876|Q685J3-2|MUC17	104.0567914643314	0.05230027148140989	4				NaN	NaN	0	NaN	10408	3723	14131
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14134	36.317	NaN	3008.2	30	0	610.75	0.106	+			10705	FAADAVKL	8	52	417.73951687193136	NaN	0	417.7397155761719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FAADAVKL_	ENSG00000177156|ENST00000319006|TALDO1;ENST00000530666.1_1_11:764238-764842:+|nuORF;nc|ENSG00000177156|P37837-2|TALDO1	76.7741389293348	1.7418937515398478	4				NaN	NaN	0	NaN	10409	3723	14131
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14135	36.319	NaN	2022.2	30	0	439.61	0.034	+			48227	VTAVNLVLL	9	54	471.30497972047533	940.5954065077507	2	471.305419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTAVNLVLL_	COL1A1|p.R304Vfs*237|1|0.57|ENSG00000108821|chr17:50196361-50196361|G/-|frameshift_variant	71.29570347882199	0.13518600952103718	4				NaN	NaN	0	NaN	10410	3723	14131
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14147	36.344	NaN	9735.4	30	0	1411.1	0.214	+			10376	EVAKVIVSM	9	66	488.279422459904	974.5442919866081	2	488.2804870605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EVAKVIVSM_	AKAP9|p.Q3083Nfs*28|1|0.15|ENSG00000127914|chr7:92089389-92089390|-/TGAATATCAAGCAGCTATGGAATGCC|frameshift_variant;AKAP9|p.T1942Lfs*3|3|0.18|ENSG00000127914|chr7:92062328-92062328|A/-|frameshift_variant;ENSG00000127914|ENST00000356239|AKAP9;ENST00000493453.1_1_7:91570251-91670224:+|nuORF;nc|ENSG00000127914|Q99996-1|AKAP9;nc|ENSG00000127914|Q99996-3|AKAP9;nc|ENSG00000127914|Q99996-4|AKAP9;nc|ENSG00000127914|Q99996-5|AKAP9;nc|ENSG00000127914|Q99996-6|AKAP9	131.03138772384656	0.014687601201650916	4				NaN	NaN	0	NaN	10419	3726	14146
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14148	36.347	NaN	3645.9	30	0	896.66	0.106	+			1451	AFAKLSEL	8	48	439.75272533454904	877.4908977358981	2	439.7523193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AFAKLSEL_	ENSG00000213931|ENST00000396895|HBE1	94.00642277110589	0.2653416297186628	4				NaN	NaN	0	NaN	10420	3726	14146
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14149	36.349	NaN	1896.1	30	0	294.37	0.106			+	46951	VKEGRWKG	8	56	480.2737822466548	NaN	0	480.2925720214844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VKEGRWKG_	REV__ENSG00000107779|ENST00000372037|BMPR1A;REV__ENSG00000138696|ENST00000515059|BMPR1B;REV__nc|ENSG00000138696|O00238-2|BMPR1B	37.15910966729921	1.7418937515398478	4				NaN	NaN	0	NaN	10421	3726	14146
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14150	36.351	NaN	2844.7	30	0	365.84	0.106	+			25312	LPAPVNCGDL	10	66	499.7521638742425	997.489774815285	2	499.7525329589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LPAPVNCGDL_	ENSG00000116032|ENST00000234389|GRIN3B	49.44154591367651	0.46214596422418036	4				NaN	NaN	0	NaN	10422	3726	14146
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14151	36.353	NaN	2744.4	30	0	888.64	0.106				-1	VTHGCIVSTIK	11	52	405.55634947380855	NaN	0	405.55670166015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_VTHGC(Carbamidomethyl (C))IVSTIK_	ENSG00000163681|ENST00000671191|SLMAP;ENST00000467901.1_1_3:57743378-57875870:+|nuORF;nc|ENSG00000163681|Q14BN4-2|SLMAP;nc|ENSG00000163681|Q14BN4-3|SLMAP;nc|ENSG00000163681|Q14BN4-6|SLMAP;nc|ENSG00000163681|Q14BN4-7|SLMAP;nc|ENSG00000163681|Q14BN4|SLMAP	31.634271133179894	0.4244354679066847	4				NaN	NaN	0	NaN	10423	3726	14146
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14152	36.355	NaN	1803.4	30	0	763.57	0.038			+	48815	VVALLDRDSSI	11	44	594.3336096330919	1186.6526663329837	2	594.3345947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VVALLDRDSSI_	REV__ENSG00000196419|ENST00000360079|XRCC6;REV__ENST00000457831.1_1_X:149400805-149400952:-|nuORF;REV__XRCC6|p.H486Pfs*12|1|0.12|ENSG00000196419|chr22:41658287-41658287|A/-|frameshift_variant;REV__XRCC6|p.R403Afs*25|1|0.35|ENSG00000196419|chr22:41653603-41653603|C/-|frameshift_variant	27.64392233501311	0.6998289966465058	4				NaN	NaN	0	NaN	10424	3726	14146
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14165	36.382	NaN	8149.9	30	0	2580.3	0.214	+			18975	IVSDFTIGR	9	63	504.2795730418517	1006.5445931505034	2	504.279541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IVSDFTIGR_	ENSG00000110713|ENST00000324932|NUP98;nc|ENSG00000110713|P52948-2|NUP98;nc|ENSG00000110713|P52948-3|NUP98;nc|ENSG00000110713|P52948-4|NUP98;nc|ENSG00000110713|P52948-6|NUP98;nc|ENSG00000110713|P52948|NUP98;NUP98|p.N1328Tfs*89|2|0.22|ENSG00000110713|chr11:3699159-3699159|T/-|frameshift_variant	129.42129120953632	0.01549634589885217	4				NaN	NaN	0	NaN	10434	3729	14164
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14166	36.385	NaN	4359.7	30	0	519.57	0.106	+			44440	TSMLYVVGK	9	66	499.27279831634746	996.531043699495	2	499.27288818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TSMLYVVGK_	ENSG00000106789|ENST00000375077|CORO2A	98.62937762414208	0.04060045538121712	4				NaN	NaN	0	NaN	10435	3729	14164
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14167	36.387	NaN	2599	30	0	639.69	0.106	+			17098	HSGPVIPVY	9	48	484.7634557252439	967.5123585172878	2	484.76318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HSGPVIPVY_	ENSG00000114315|ENST00000232424|HES1	50.0245360154114	0.3026755932229825	4				NaN	NaN	0	NaN	10436	3729	14164
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14168	36.389	NaN	638.23	30	0	142.58	0.034			+	18501	ISHVLTKN	8	33	456.26933577884915	NaN	0	456.2690734863281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ISHVLTKN_	REV__ENSG00000166069|ENST00000319669|TMCO5A;REV__nc|ENSG00000166069|Q8N6Q1-2|TMCO5A	21.9598887501803	1.7418937515398478	4				NaN	NaN	0	NaN	10437	3729	14164
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14181	36.416	NaN	6345.6	30	0	1238.6	0.214			+	25664	LRCGLTAVL	9	68	473.2830006066358	944.5514482800717	2	473.2841491699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LRCGLTAVL_	REV__ENST00000437099.6_1_17:9819253-9819832:-|nuORF	74.25504064058377	0.12238981753128622	4				NaN	NaN	0	NaN	10447	3732	14180
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14182	36.42	NaN	4565	30	0	629.91	0.106	+			6540	AYGKDFHLI	9	67	532.2822294162206	1062.5499058992411	2	532.2828369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AYGKDFHLI_	ENSG00000198160|ENST00000401041|MIER1;nc|ENSG00000198160|Q8N108-13|MIER1;nc|ENSG00000198160|Q8N108-14|MIER1;nc|ENSG00000198160|Q8N108-15|MIER1;nc|ENSG00000198160|Q8N108-16|MIER1;nc|ENSG00000198160|Q8N108-17|MIER1;nc|ENSG00000198160|Q8N108-18|MIER1;nc|ENSG00000198160|Q8N108-19|MIER1;nc|ENSG00000198160|Q8N108|MIER1	45.97224482568171	0.3502073465782774	4				NaN	NaN	0	NaN	10448	3732	14180
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14183	36.421	NaN	1128.8	30	0	147.31	0.106	+			37258	SLAALSKVI	9	46	451.2894592285156	NaN	0	451.2894592285156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLAALSKVI_	ENSG00000187240|ENST00000375735|DYNC2H1;nc|ENSG00000187240|Q8NCM8-2|DYNC2H1	58.78195531508484	0.1545138866451181	4				NaN	NaN	0	NaN	10449	3732	14180
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14184	36.423	NaN	1283.6	30	0	217.75	0.034			+	48494	VTNALAFAL	9	51	460.26800576640045	918.5214585996009	2	460.2679138183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTNALAFAL_	REV__SIGMAR1|p.D188N|1|0.34|ENSG00000147955|chr9:34635742-34635742|C/T|missense_variant	45.9519527083369	0.35044536499095585	4				NaN	NaN	0	NaN	10450	3732	14180
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14196	36.449	NaN	6015.6	30	0	940.13	0.214	+			10466	EVNSGFFYK	9	69	545.7645004313661	NaN	0	545.7642822265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EVNSGFFYK_	CCT6A|p.I274*|1|0.21|ENSG00000146731|chr7:56058450-56058450|A/-|frameshift_variant;CCT6B|p.I274*|1|0.1|ENSG00000132141|chr17:34942549-34942549|T/-|frameshift_variant;ENSG00000132141|ENST00000314144|CCT6B;ENSG00000146731|ENST00000275603|CCT6A;ENST00000482776.1_1_7:56124009-56126486:+|nuORF;nc|ENSG00000132141|Q92526-2|CCT6B;nc|ENSG00000132141|Q92526-3|CCT6B;nc|ENSG00000146731|P40227-2|CCT6A	101.60071028292904	0.0182107634719595	4				NaN	NaN	0	NaN	10459	3735	14195
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14197	36.452	NaN	3185.5	30	0	285.4	0.106	+			38083	SPSYSVTQM	9	54	500.2260966712098	998.4376404092196	2	500.2260437011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SPSYSVTQM_	ENSG00000145113|ENST00000463781|MUC4;MUC4|p.L3985Ffs*274|1|0.3|ENSG00000145113|chr3:195779627-195779627|G/-|frameshift_variant;MUC4|p.N4902Tfs*8|1|0.37|ENSG00000145113|chr3:195761027-195761027|T/-|frameshift_variant;nc|ENSG00000145113|Q99102-10|MUC4;nc|ENSG00000145113|Q99102-11|MUC4;nc|ENSG00000145113|Q99102-15|MUC4;nc|ENSG00000145113|Q99102-16|MUC4;nc|ENSG00000145113|Q99102-17|MUC4;nc|ENSG00000145113|Q99102-2|MUC4;nc|ENSG00000145113|Q99102-3|MUC4;nc|ENSG00000145113|Q99102-5|MUC4;nc|ENSG00000145113|Q99102-7|MUC4;nc|ENSG00000145113|Q99102-8|MUC4;nc|ENSG00000145113|Q99102-9|MUC4	74.25504064058377	0.12238981753128622	4				NaN	NaN	0	NaN	10460	3735	14195
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14198	36.454	NaN	1692.2	30	0	207.39	0.106	+			28861	NPWDNKAVY	9	47	553.7671033748002	1105.5196538164003	2	553.767822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NPWDNKAVY_	ENSG00000162298|ENST00000377190|SYVN1;ENST00000449943.5_1_11:64897669-64899838:-|nuORF;ENST00000529207.5_1_11:64898917-64899817:-|nuORF;nc|ENSG00000162298|Q86TM6-2|SYVN1;nc|ENSG00000162298|Q86TM6-3|SYVN1;SYVN1|p.N368Qfs*129|1|0.33|ENSG00000162298|chr11:65130663-65130664|-/G|frameshift_variant;SYVN1|p.N368Tfs*117|1|0.4|ENSG00000162298|chr11:65130664-65130664|G/-|frameshift_variant	45.97224482568171	0.3502073465782774	4				NaN	NaN	0	NaN	10461	3735	14195
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14199	36.456	NaN	3033.6	30	0	505.81	0.106			+	31013	QESSSEKAY	9	57	514.7289883218233	NaN	0	514.7286376953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QESSSEKAY_	REV__ENSG00000182446|ENST00000331134|NPLOC4;REV__ENST00000572351.1_1_17:79555189-79563202:-|nuORF;REV__nc|ENSG00000182446|Q8TAT6-2|NPLOC4	58.78195531508484	0.1545138866451181	4				NaN	NaN	0	NaN	10462	3735	14195
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14200	36.458	NaN	2102.7	30	0	229.81	0.106			+	48204	VTAKMLTSV	9	56	475.2726780747493	948.5308032162986	2	475.2731018066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTAKMLTSV_	REV__ENSG00000141698|ENST00000435506|NT5C3B;REV__ENST00000393910.5_1_17:39983688-39992209:-|nuORF;REV__ENST00000476921.5_1_17:39991516-39992209:-|nuORF	56.72105179125745	0.24094814563026265	4				NaN	NaN	0	NaN	10463	3735	14195
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14201	36.46	NaN	1572.3	30	0	382.88	0.106			+	10309	ETQSYKSI	8	52	478.2393160063494	954.4640790794988	2	478.23907470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ETQSYKSI_	REV__ATP13A3|p.F1107Lfs*5|1|0.42|ENSG00000133657|chr3:194419960-194419960|A/-|frameshift_variant;REV__ATP13A3|p.I476Sfs*11|1|0.19|ENSG00000133657|chr3:194446998-194446998|T/-|frameshift_variant;REV__ATP13A3|p.L1114Ffs*17|1|0.25|ENSG00000133657|chr3:194419939-194419940|-/A|frameshift_variant;REV__ATP13A3|p.L1114Yfs*22|1|0.23|ENSG00000133657|chr3:194419940-194419940|A/-|frameshift_variant;REV__ATP13A3|p.P1198Lfs*19|1|0.04|ENSG00000133657|chr3:194406007-194406008|-/ATATAGTA|frameshift_variant;REV__ATP13A3|p.S1110Ffs*21|2|0.22|ENSG00000133657|chr3:194419952-194419953|-/A|frameshift_variant;REV__ATP13A3|p.V1108Cfs*23|1|0.26|ENSG00000133657|chr3:194419959-194419960|-/A|frameshift_variant;REV__ENSG00000133657|ENST00000645319|ATP13A3;REV__nc|ENSG00000133657|Q9H7F0|ATP13A3	63.30626980617807	0.4690498839812213	4				NaN	NaN	0	NaN	10464	3735	14195
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14202	36.461	NaN	1623.8	30	0	250.41	0.033			+	1865	AILDNKVI	8	54	443.2736339029108	884.5327148726216	2	443.273193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AILDNKVI_	REV__ENSG00000008294|ENST00000262013|SPAG9;REV__ENST00000514613.5_1_17:49067015-49156972:-|nuORF;REV__nc|ENSG00000008294|O60271-2|SPAG9;REV__nc|ENSG00000008294|O60271-3|SPAG9;REV__nc|ENSG00000008294|O60271-4|SPAG9;REV__nc|ENSG00000008294|O60271-5|SPAG9;REV__nc|ENSG00000008294|O60271-9|SPAG9;REV__SPAG9|p.N750Ifs*8|1|0.15|ENSG00000008294|chr17:50993913-50993913|T/-|frameshift_variant;REV__SPAG9|p.R484Kfs*7|1|0.28|ENSG00000008294|chr17:51005237-51005238|-/T|frameshift_variant	90.77665401227738	0.27511901818546464	4				NaN	NaN	0	NaN	10465	3735	14195
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14220	36.499	NaN	5066	30	0	2639	0.214				-1	 	0	39	372.7174566086048	743.4203602840096	2	372.71783447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10480	3738	14219
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14221	36.502	NaN	4310.2	30	0	463.17	0.106	+			46207	VEAGGMQAL	9	51	438.2181659193475	874.421778905495	2	438.7195739746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VEAGGMQAL_	ENSG00000168036|ENST00000349496|CTNNB1;ENSG00000173801|ENST00000393931|JUP	69.6276240434122	0.14239879520340665	4				NaN	NaN	0	NaN	10481	3738	14219
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14222	36.504	NaN	3049.5	30	0	502.98	0.035	+			30465	QADPTKLEL	9	60	507.77551202536375	1013.5364711175275	2	508.2763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QADPTKLEL_	ENSG00000164609|ENST00000297151|SLU7;ENST00000520841.1_1_5:159833399-159835410:-|nuORF;ENST00000523219.1_1_5:159833399-159834623:-|nuORF	71.87747018426188	0.13267044672804276	4				NaN	NaN	0	NaN	10482	3738	14219
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14233	36.529	NaN	3865.1	30	0	1042.7	0.214			+	45379	TVTINYVAV	9	55	490.2764175492437	978.5382821652875	2	490.2766418457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVTINYVAV_	REV__ENSG00000243232|ENST00000289269|PCDHAC2;REV__nc|ENSG00000243232|Q9Y5I4-2|PCDHAC2;REV__PCDHAC2|p.R431W|1|0.32|ENSG00000243232|chr5:140968057-140968057|C/T|missense_variant;REV__PCDHAC2|p.Y622Lfs*8|1|0.23|ENSG00000243232|chr5:140968624-140968625|-/T|frameshift_variant	58.78195531508484	0.22376836668196862	4				NaN	NaN	0	NaN	10490	3741	14232
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14234	36.533	NaN	1293.8	30	0	177.88	0.106			+	32779	RASCELYAVA	10	53	541.7661743164062	NaN	0	541.7661743164062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RASCELYAVA_	REV__ENSG00000173156|ENST00000308831|RHOD	39.252832667884924	0.37128895876774715	4				NaN	NaN	0	NaN	10491	3741	14232
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14235	36.535	NaN	2699.3	30	0	449.67	0.035	+			24309	LFGVFMRY	8	50	516.7713109920221	1031.5280690508441	2	516.771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LFGVFMRY_	RHCG|p.V30M|2|0.24|ENSG00000140519|chr15:89496457-89496457|C/T|missense_variant	39.021493756699265	0.6623843612266921	4				NaN	NaN	0	NaN	10492	3741	14232
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14247	36.56	NaN	19907	30	0	4613.7	0.214	+			28999	NSNDVFVLK	9	74	518.2768532978897	1034.5391536625793	2	518.2777709960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NSNDVFVLK_	ENSG00000006747|ENST00000297029|SCIN;ENSG00000127831|ENST00000248444|VIL1;nc|ENSG00000006747|Q9Y6U3-3|SCIN	177.3047273071476	0.0015666121956477066	4				NaN	NaN	0	NaN	10501	3744	14246
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14248	36.564	NaN	7505.1	30	0	1032	0.106			+	48225	VTAVLSGLPS	10	68	472.27636013030997	942.53816732742	2	472.2765197753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTAVLSGLPS_	REV__ENSG00000272674|ENST00000609684|PCDHB16	98.62937762414208	0.0817671936103422	4				NaN	NaN	0	NaN	10502	3744	14246
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14249	36.565	NaN	2445.7	30	0	708.33	0.106			+	2028	AKPLETDQI	9	63	507.77551202536375	1013.5364711175275	2	507.77679443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AKPLETDQI_	REV__ENSG00000186197|ENST00000334232|EDARADD;REV__nc|ENSG00000186197|Q8WWZ3-2|EDARADD	58.78195531508484	0.22376836668196862	4				NaN	NaN	0	NaN	10503	3744	14246
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14250	36.567	NaN	3633.1	30	0	1067.8	0.034			+	49443	VVVLEGGALL	10	60	485.30225672970425	968.5899605262085	2	485.302490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVVLEGGALL_	REV__ENST00000442326.1_1_2:70321210-70322104:-|nuORF;REV__ENST00000457870.5_1_2:70321210-70322104:-|nuORF	51.33545320467046	0.4446945571623749	4				NaN	NaN	0	NaN	10504	3744	14246
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14262	36.593	NaN	10614	30	0	2464.4	0.214	+			34847	RYQDIIHSI	9	65	572.8087215311004	1143.6028901290008	2	572.8092651367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RYQDIIHSI_	BAZ1B|p.A1298Cfs*10|1|0.16|ENSG00000009954|chr7:73444083-73444084|-/G|frameshift_variant;ENSG00000009954|ENST00000339594|BAZ1B;ENST00000466844.1_1_7:72877242-72880699:-|nuORF;nc|ENSG00000009954|Q9UIG0-2|BAZ1B	91.26522074875469	0.06129826844580791	4				NaN	NaN	0	NaN	10513	3747	14261
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14263	36.596	NaN	4326.1	30	0	1690.8	0.106			+	2653	AQLQRLEL	8	60	485.78748776773654	969.5604226022731	2	485.78717041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AQLQRLEL_	REV__ENSG00000149930|ENST00000308893|TAOK2;REV__nc|ENSG00000149930|Q9UL54-2|TAOK2;REV__nc|ENSG00000149930|Q9UL54-3|TAOK2;REV__nc|ENSG00000149930|Q9UL54-4|TAOK2;REV__TAOK2|p.G983Vfs*50|1|0.43|ENSG00000149930|chr16:29987216-29987216|G/-|frameshift_variant	66.42927471994793	0.4381325844043345	4				NaN	NaN	0	NaN	10514	3747	14261
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14264	36.598	NaN	1212.9	30	0	279.78	0.106	+			24436	LGCNPSLP	8	44	429.21303802598055	856.4115231187611	2	429.2127990722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LGC(Carbamidomethyl (C))NPSLP_	ENSG00000095951|ENST00000379388|HIVEP1;HIVEP1|p.I2404Sfs*57|1|0.23|ENSG00000095951|chr6:12163508-12163508|G/-|frameshift_variant	55.50420428727701	0.5462892107279674	4				NaN	NaN	0	NaN	10515	3747	14261
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14265	36.6	NaN	1526.6	30	0	293.33	0.106	+			27669	MPTAYNTDY	9	45	538.2231148349179	1074.4316767366356	2	538.2237548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MPTAYNTDY_	ENSG00000068305|ENST00000557942|MEF2A;ENSG00000116604|ENST00000348159|MEF2D;ENST00000561125.2_1_15:100246921-100252973:+|nuORF;nc|ENSG00000068305|Q02078-3|MEF2A;nc|ENSG00000068305|Q02078-4|MEF2A;nc|ENSG00000068305|Q02078-5|MEF2A;nc|ENSG00000068305|Q02078-6|MEF2A;nc|ENSG00000068305|Q02078-7|MEF2A;nc|ENSG00000068305|Q02078-8|MEF2A;nc|ENSG00000068305|Q02078|MEF2A;nc|ENSG00000116604|Q14814-2|MEF2D;nc|ENSG00000116604|Q14814-3|MEF2D;nc|ENSG00000116604|Q14814-4|MEF2D;nc|ENSG00000116604|Q14814-5|MEF2D;nc|ENSG00000116604|Q14814-6|MEF2D	37.81151784470057	0.4459294069877048	4				NaN	NaN	0	NaN	10516	3747	14261
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14266	36.602	NaN	998.81	30	0	180.87	0.035	+			30963	QEPVTYTAI	9	50	511.2652282714844	NaN	0	511.2652282714844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QEPVTYTAI_	CACHD1|p.Q1185Sfs*23|1|0.37|ENSG00000158966|chr1:64691433-64691434|-/C|frameshift_variant;ENSG00000158966|ENST00000651257|CACHD1;nc|ENSG00000158966|Q5VU97-2|CACHD1	58.78195531508484	0.1545138866451181	4				NaN	NaN	0	NaN	10517	3747	14261
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14282	36.635	NaN	8288.8	30	0	4066.5	0.214	+			32220	QTAQIFFTK	9	62	542.2949984839628	1082.5754440347255	2	542.295654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QTAQIFFTK_	ENSG00000167778|ENST00000301463|SPRYD3	59.93077597824379	0.21419174904018318	4				NaN	NaN	0	NaN	10530	3750	14281
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14283	36.638	NaN	739.55	30	0	69.616	0.106	+			31359	QKATETEF	8	47	477.2322855771071	952.4500182210143	2	477.2320861816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QKATETEF_	ENSG00000136478|ENST00000584379|TEX2;ENST00000584498.5_1_17:62228191-62232353:-|nuORF;nc|ENSG00000136478|Q8IWB9-2|TEX2	40.5726180659479	0.6527593143185008	4				NaN	NaN	0	NaN	10531	3750	14281
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14284	36.64	NaN	6627.7	30	0	654.87	0.106	+			32581	QYAPSTAQF	9	63	506.7402521566933	1011.4659513801867	2	506.7403869628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QYAPSTAQF_	ENSG00000122515|ENST00000309315|ZMIZ2;nc|ENSG00000122515|Q8NF64-2|ZMIZ2;nc|ENSG00000122515|Q8NF64-3|ZMIZ2	132.757866228626	0.013877640931359021	4				NaN	NaN	0	NaN	10532	3750	14281
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14285	36.642	NaN	1330.3	30	0	146.06	0.035			+	44952	TVAVLKVKE	9	49	493.8157308062413	985.6169086792826	2	493.8150329589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TVAVLKVKE_	REV__tr|U7SJI0|U7SJI0_FUSNUPyridoxalphosphatehomeostasisproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02052PE=3SV=1	33.921630207806714	0.48623198279849766	4				NaN	NaN	0	NaN	10533	3750	14281
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14300	36.674	NaN	1797.6	30	0	386.71	0.214			+	-1	MKGVQAVVF	9	56	497.773390995821	993.532229058442	2	498.2745056152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))KGVQAVVF_	REV__tr|U7T1S7|U7T1S7_FUSNUTRAPC4-dicarboxylatetransportsystempermeaseDctMsubunitdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00560PE=4SV=1	38.80614096846853	0.43426287593479557	4				NaN	NaN	0	NaN	10545	3753	14299
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14301	36.677	NaN	1157.8	30	0	120.16	0.106	+			17253	HYAALAHYF	9	53	546.7658888447435	1091.5172247562869	2	546.7664794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HYAALAHYF_	ENSG00000131941|ENST00000254260|RHPN2;ENST00000566346.2_1_16:33401403-33412789:+|nuORF;nc|ENSG00000131941|Q8IUC4-2|RHPN2	60.403631409065575	0.21025000616765316	4				NaN	NaN	0	NaN	10546	3753	14299
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14302	36.679	NaN	1170.1	30	0	245.54	0.036			+	11098	FFFTNTEY	8	45	534.7376930709008	NaN	0	534.7368774414062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FFFTNTEY_	REV__ENSG00000164776|ENST00000297373|PHKG1;REV__ENST00000467726.1_1_7:56154661-56156634:-|nuORF;REV__nc|ENSG00000164776|Q16816-2|PHKG1	60.97194046774394	1.7418937515398478	4				NaN	NaN	0	NaN	10547	3753	14299
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14314	36.704	NaN	2709.7	30	0	474.85	0.142	+			48540	VTNVTSLLK	9	61	487.79760421016874	NaN	0	487.79736328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTNVTSLLK_	ENSG00000137076|ENST00000314888|TLN1;ENSG00000171914|ENST00000636159|TLN2;nc|ENSG00000137076|Q9Y490-2|TLN1	66.96192283764107	0.11962625698446946	4				NaN	NaN	0	NaN	10556	3756	14313
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14330	36.739	NaN	1230.1	30	0	155.56	0.214	+			18706	ITEGGVSIN	9	42	445.2351557524623	NaN	0	445.234619140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ITEGGVSIN_	ENSG00000139131|ENST00000324868|YARS2;YARS2|p.R427L|1|0.1|ENSG00000139131|chr12:32747358-32747358|C/A|missense_variant	47.657333605630114	0.2228375344433429	4				NaN	NaN	0	NaN	10569	3759	14329
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14331	36.743	NaN	1338.3	30	0	348.1	0.034			+	12322	GDGVIVIKL	9	48	457.28942737116876	912.5643018091375	2	457.2897644042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GDGVIVIKL_	REV__ENSG00000139725|ENST00000267205|RHOF;REV__nc|ENSG00000139725|Q9HBH0-2|RHOF	34.172542307311794	0.4838870758800184	4				NaN	NaN	0	NaN	10570	3759	14329
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14344	36.77	NaN	3636.3	30	0	557.98	0.143	+			14490	GTCLFVAVK	9	56	497.773390995821	993.532229058442	2	498.2752990722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GTC(Carbamidomethyl (C))LFVAVK_	ENSG00000198752|ENST00000361246|CDC42BPB	110.11987700582712	0.028875675806141952	4				NaN	NaN	0	NaN	10580	3762	14343
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14356	36.798	NaN	6738.1	30	0	842	0.214	+			51158	YPAQGVQQF	9	62	519.2561105141629	1036.4976680951256	2	519.2570190429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YPAQGVQQF_	EIF4G1|p.P1229Qfs*2|1|0.18|ENSG00000114867|chr3:184327606-184327606|C/-|frameshift_variant;EIF4G1|p.T436Hfs*40|1|0.21|ENSG00000114867|chr3:184321883-184321884|-/C|frameshift_variant;ENSG00000114867|ENST00000346169|EIF4G1;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1	128.8611167810002	0.015835461597062447	4				NaN	NaN	0	NaN	10589	3765	14355
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14357	36.801	NaN	596.25	30	0	84.755	0.106	+			37805	SMGAVQQF	8	30	434.2056299536437	866.3967069740875	2	434.2056579589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SMGAVQQF_	ENSG00000138190|ENST00000260762|EXOC6;nc|ENSG00000138190|Q8TAG9-2|EXOC6	44.116797842482775	0.6307669463330267	4				NaN	NaN	0	NaN	10590	3765	14355
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14358	36.803	NaN	1086.8	30	0	155.71	0.106			+	49480	VVYSLLHR	8	44	493.7943115234375	NaN	0	493.7943115234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVYSLLHR_	REV__ENST00000348035.8_1_7:6442384-6442585:+|nuORF	53.351449002276354	1.7418937515398478	4				NaN	NaN	0	NaN	10591	3765	14355
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14359	36.805	NaN	1658.9	30	0	378.63	0.035	+			44068	TPSQPLPTY	9	39	502.25841126042206	1002.5022695876442	2	502.2591247558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TPSQPLPTY_	ENSG00000173821|ENST00000582970|RNF213;nc|ENSG00000173821|Q63HN8-4|RNF213;nc|ENSG00000173821|Q63HN8|RNF213;RNF213|p.C5022Lfs*7|1|0.3|ENSG00000173821|chr17:80389237-80389237|G/-|frameshift_variant;RNF213|p.P2167Lfs*64|1|0.09|ENSG00000173821|chr17:80344834-80344835|-/T|frameshift_variant;RNF213|p.Q1953Rfs*50|2|0.13|ENSG00000173821|chr17:80340219-80340219|C/-|frameshift_variant	87.69643885390035	0.07135982304947239	4				NaN	NaN	0	NaN	10592	3765	14355
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14371	36.83	NaN	6361.3	30	0	1323.6	0.142	+			28129	NAISVTTSY	9	55	478.2401945813547	954.4658362295094	2	478.240478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAISVTTSY_	ENSG00000198730|ENST00000361367|CTR9	166.67852932204877	0.003333876602083393	4				NaN	NaN	0	NaN	10601	3768	14370
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14385	36.861	NaN	1420.1	30	0	158.79	0.143	+			43444	TGLSKHVED	9	48	493.25326211733966	NaN	0	493.25286865234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TGLSKHVED_	ENSG00000160862|ENST00000292401|AZGP1;ENST00000495765.1_1_7:99569363-99573643:-|nuORF	35.61828744233558	0.29773779453147337	4				NaN	NaN	0	NaN	10612	3771	14384
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14399	36.892	NaN	3946.2	30	0	1320	0.214	+			4887	ATQDILKALSK	11	35	396.5712522881109	1186.6919274645327	3	396.5714111328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATQDILKALSK_	ENSG00000085276|ENST00000651503|MECOM;MECOM|p.G611Efs*33|1|0.39|ENSG00000085276|chr3:169115476-169115476|C/-|frameshift_variant;MECOM|p.G614Efs*30|5|0.4|ENSG00000085276|chr3:169115469-169115469|T/-|frameshift_variant;MECOM|p.P513Qfs*15|2|0.39|ENSG00000085276|chr3:169115772-169115772|A/-|frameshift_variant;MECOM|p.S389Rfs*46|1|0.33|ENSG00000085276|chr3:169116140-169116143|CTGA/-|frameshift_variant;MECOM|p.V498Sfs*27|1|0.34|ENSG00000085276|chr3:169115816-169115817|-/T|frameshift_variant;nc|ENSG00000085276|Q03112-1|MECOM;nc|ENSG00000085276|Q03112-4|MECOM;nc|ENSG00000085276|Q03112-5|MECOM;nc|ENSG00000085276|Q03112-6|MECOM;nc|ENSG00000085276|Q03112-8|MECOM;nc|ENSG00000085276|Q03112|MECOM	24.231819034082204	0.7356191775841856	4				NaN	NaN	0	NaN	10623	3774	14398
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14400	36.896	NaN	2727.9	30	0	360.83	0.035	+			50683	YEEKISVL	8	56	490.7684256423287	979.5222983514574	2	490.76922607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YEEKISVL_	ENSG00000144674|ENST00000361924|GOLGA4;GOLGA4|p.N1805Kfs*18|1|0.11|ENSG00000144674|chr3:37327293-37327294|-/A|frameshift_variant;GOLGA4|p.N1805Tfs*6|1|0.38|ENSG00000144674|chr3:37327294-37327294|A/-|frameshift_variant;nc|ENSG00000144674|Q13439-3|GOLGA4;nc|ENSG00000144674|Q13439-4|GOLGA4;nc|ENSG00000144674|Q13439-5|GOLGA4	79.71258880314673	0.32596852995588826	4				NaN	NaN	0	NaN	10624	3774	14398
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14414	36.925	NaN	11343	30	0	2674.8	0.214			+	50054	WEVGFSRA	8	57	476.23751640998967	950.4604798867794	2	476.2375793457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WEVGFSRA_	REV__ENSG00000117091|ENST00000368046|CD48	40.5726180659479	0.6527593143185008	4				NaN	NaN	0	NaN	10635	3777	14413
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14415	36.929	NaN	1879	30	0	614.32	0.106			+	44994	TVDQSKIF	8	44	469.25322793743135	936.4919029416627	2	469.25347900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVDQSKIF_	REV__ENSG00000146530|ENST00000275358|VWDE;REV__VWDE|p.N589*|1|0.33|ENSG00000146530|chr7:12370687-12370688|-/A|frameshift_variant	34.172542307311794	0.6954784234644539	4				NaN	NaN	0	NaN	10636	3777	14413
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14416	36.931	NaN	1115.5	30	0	130.23	0.106			+	28934	NRLCKYCF	8	54	523.7473754882812	NaN	0	523.7473754882812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NRLCKYCF_	REV__ENSG00000139517|ENST00000316334|LNX2;REV__LNX2|p.L374Wfs*8|1|0.37|ENSG00000139517|chr13:27562518-27562518|C/-|frameshift_variant	40.5726180659479	1.7418937515398478	4				NaN	NaN	0	NaN	10637	3777	14413
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14417	36.933	NaN	1291	30	0	256.06	0.106			+	-1	EGKAGRCG	8	37	417.6981203916282	NaN	0	417.6981506347656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_EGKAGRC(Carbamidomethyl (C))G_	REV__ENST00000482862.1_1_7:104909300-105029811:-|nuORF	38.80614096846853	1.7418937515398478	4				NaN	NaN	0	NaN	10638	3777	14413
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14418	36.935	NaN	893.69	30	0	170.86	0.033			+	25296	LPAAGSLLF	9	45	444.7629125862529	NaN	0	444.7631530761719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LPAAGSLLF_	REV__ENSG00000114013|ENST00000330540|CD86;REV__nc|ENSG00000114013|P42081-3|CD86;REV__nc|ENSG00000114013|P42081-4|CD86	47.91560031466742	0.22105767942158736	4				NaN	NaN	0	NaN	10639	3777	14413
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14429	36.96	NaN	4439.3	30	0	1383.6	0.214			+	46621	VGAAAALV	8	37	336.2078086834084	670.4010644336169	2	336.2078857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VGAAAALV_	REV__ENST00000393196.7_1_17:49230915-49231008:+|nuORF	33.49298260027079	0.7007254697536482	4				NaN	NaN	0	NaN	10647	3780	14428
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14430	36.963	NaN	6684.7	30	0	1796.9	0.106	+			41684	SVSDIIVVAK	10	53	515.8105602506585	1029.6065675681168	2	515.8111572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVSDIIVVAK_	ENSG00000006042|ENST00000579849|TMEM98;ENST00000583120.1_1_17:31258522-31263466:+|nuORF	128.3478880297481	0.01553957493207534	4				NaN	NaN	0	NaN	10648	3780	14428
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14431	36.965	NaN	1311.9	30	0	334.97	0.036	+			16083	HDCGMYRGF	9	55	543.2176757035343	1084.4207984738684	2	543.2168579101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HDCGMYRGF_	sp|Q6RJQ3|UL141_HCMVMProteinUL141OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL141PE=1SV=2	37.15910966729921	0.4535818937225704	4				NaN	NaN	0	NaN	10649	3780	14428
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14458	37.026	NaN	3680.8	30	0	642.43	0.214	+			27843	MTADVIELK	9	64	510.2759560464371	1018.5373591596742	2	510.27557373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MTADVIELK_	ENSG00000067704|ENST00000366922|IARS2	98.58198989935565	0.04066992115528678	4				NaN	NaN	0	NaN	10670	3786	14457
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14459	37.029	NaN	1902.4	30	0	153.48	0.037	+			16515	HEVEKMFTL	9	62	567.2860078252926	1132.557462717385	2	567.2861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HEVEKMFTL_	ENSG00000139719|ENST00000267199|VPS33A;ENST00000544349.5_1_12:122735394-122750988:-|nuORF;VPS33A|p.F371Lfs*4|1|0.18|ENSG00000139719|chr12:122239929-122239929|A/-|frameshift_variant;VPS33A|p.F82Lfs*6|1|0.44|ENSG00000139719|chr12:122263622-122263622|A/-|frameshift_variant;VPS33A|p.G459Afs*86|7|0.14|ENSG00000139719|chr12:122235850-122235850|C/-|frameshift_variant;VPS33A|p.G552Afs*2|1|0.26|ENSG00000139719|chr12:122232382-122232382|C/-|frameshift_variant;VPS33A|p.R460Qfs*17|2|0.28|ENSG00000139719|chr12:122235849-122235850|-/C|frameshift_variant	106.68306549817024	0.032382560583716295	4				NaN	NaN	0	NaN	10671	3786	14457
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14472	37.057	NaN	3597.5	30	0	798.44	0.214			+	-1	LSSVVCIAI	9	55	481.27283203727404	960.5311111413481	2	481.2739562988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_LSSVVC(Carbamidomethyl (C))IAI_	REV__ENSG00000249158|ENST00000398640|PCDHA11;REV__nc|ENSG00000249158|Q9Y5I1-2|PCDHA11;REV__PCDHA2|p.A706V|1|0.39|ENSG00000204969|chr5:140797081-140797081|C/T|missense_variant	50.0245360154114	0.3026755932229825	4				NaN	NaN	0	NaN	10681	3789	14471
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14473	37.06	NaN	2308.7	30	0	927.23	0.035			+	27163	MCVLATELG	9	56	497.2428924145285	NaN	0	497.2432861328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_MC(Carbamidomethyl (C))VLATELG_	REV__ENST00000588038.5_1_18:31206668-31206954:+|nuORF	55.50420428727701	0.16876052142120426	4				NaN	NaN	0	NaN	10682	3789	14471
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14485	37.086	NaN	12149	30	0	3688.1	0.142	+			5358	ATVVGLLAAV	10	65	457.28942737116876	912.5643018091375	2	457.2890930175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATVVGLLAAV_	ENSG00000114544|ENST00000360370|SLC41A3;ENST00000514023.5_1_3:125743683-125802950:-|nuORF;nc|ENSG00000114544|Q96GZ6-2|SLC41A3;nc|ENSG00000114544|Q96GZ6-3|SLC41A3;nc|ENSG00000114544|Q96GZ6-4|SLC41A3;nc|ENSG00000114544|Q96GZ6-5|SLC41A3;nc|ENSG00000114544|Q96GZ6-6|SLC41A3;nc|ENSG00000114544|Q96GZ6-7|SLC41A3;nc|ENSG00000114544|Q96GZ6-8|SLC41A3;nc|ENSG00000114544|Q96GZ6|SLC41A3	55.50420428727701	0.4067289358710215	4				NaN	NaN	0	NaN	10691	3792	14484
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14500	37.119	NaN	1682.1	30	0	776.97	0.144			+	10027	ERVLIVEGF	9	47	531.3049072458122	1060.5952615584242	2	531.3065185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ERVLIVEGF_	REV__AKT3|p.K161E|1|0.5|ENSG00000117020|chr1:243637691-243637691|T/C|missense_variant	26.69291269510374	0.5537881896960711	4				NaN	NaN	0	NaN	10703	3795	14499
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14513	37.148	NaN	5000.6	30	0	1143.5	0.214	+			41123	SVISSPLLK	9	64	472.2946237333818	942.5746945335636	2	472.29473876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVISSPLLK_	BRD2|p.G595Vfs*6|1|0.59|ENSG00000204256|chr6:32978327-32978327|G/-|frameshift_variant;ENSG00000204256|ENST00000374825|BRD2;nc|ENSG00000204256|P25440-2|BRD2;nc|ENSG00000204256|P25440-3|BRD2;nc|ENSG00000204256|P25440-4|BRD2	52.936696900407355	0.27249468807391813	4				NaN	NaN	0	NaN	10713	3798	14512
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14514	37.152	NaN	5608.9	30	0	1585	0.106	+			6033	AVMGAYVLLK	10	63	540.8094852372054	1079.6044175412108	2	540.8101196289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_AVM(Oxidation (M))GAYVLLK_	ENSG00000166562|ENST00000587834|SEC11C;ENST00000591406.1_1_18:56822908-56825914:+|nuORF	94.00642277110589	0.10813630424565351	4				NaN	NaN	0	NaN	10714	3798	14512
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14515	37.154	NaN	1367.1	30	0	187.6	0.106			+	50053	WETQAKQF	8	59	519.2561105141629	1036.4976680951256	2	519.2548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_WETQAKQF_	REV__ENSG00000227500|ENST00000316097|SCAMP4;REV__ENST00000472442.2_1_19:1922970-1924280:+|nuORF;REV__nc|ENSG00000227500|Q969E2-2|SCAMP4	51.33545320467046	0.5859736979383976	4				NaN	NaN	0	NaN	10715	3798	14512
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14516	37.156	NaN	1442.7	30	0	203.54	0.106	+			28807	NPIGDTGVKF	10	55	524.2768177906187	1046.5390826480373	2	524.2783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NPIGDTGVKF_	ENSG00000167634|ENST00000588756|NLRP7;nc|ENSG00000167634|Q8WX94-2|NLRP7;nc|ENSG00000167634|Q8WX94|NLRP7	56.43379154798735	0.3982744522255666	4				NaN	NaN	0	NaN	10716	3798	14512
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14517	37.158	NaN	1847	30	0	675.56	0.106			+	1082	AELANVVKL	9	49	478.79206173036704	NaN	0	478.7915344238281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AELANVVKL_	REV__ENSG00000171109|ENST00000471841|MFN1;REV__MFN1|p.E266D|1|0.3|ENSG00000171109|chr3:179367483-179367483|G/T|missense_variant;REV__nc|ENSG00000171109|Q8IWA4-2|MFN1;REV__nc|ENSG00000171109|Q8IWA4-3|MFN1	40.77816245573522	0.2702456086868081	4				NaN	NaN	0	NaN	10717	3798	14512
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14518	37.159	NaN	1274.1	30	0	262.26	0.106	+			13255	GIPELTKLL	9	45	492.3103529418439	982.6061529504879	2	492.3103942871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GIPELTKLL_	CTNNB1|p.A152G|1|0.67|ENSG00000168036|chr3:41225167-41225167|C/G|missense_variant	42.396135135203025	0.392153681582562	4				NaN	NaN	0	NaN	10718	3798	14512
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14519	37.161	NaN	816.1	30	0	70.438	0.034	+			38352	SRLTPAVAI	9	43	464.28398575508936	NaN	0	464.2840881347656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SRLTPAVAI_	ENST00000492310.5_1_7:43153648-43477745:+|nuORF	39.252832667884924	0.27938773122138094	4				NaN	NaN	0	NaN	10719	3798	14512
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14532	37.188	NaN	1994.3	30	0	160.55	0.215	+			28030	NAAEIKLTM	9	55	495.7681562739176	989.5217596146352	2	495.76873779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAAEIKLTM_	ENSG00000174780|ENST00000642900|SRP72;ENST00000580060.1_1_18:47022337-47022472:-|nuORF;nc|ENSG00000174780|O76094-2|SRP72	104.01359247289065	0.03510646158778409	4				NaN	NaN	0	NaN	10729	3801	14531
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14533	37.192	NaN	1116.7	30	0	510.74	0.106	+			5277	ATVGGQII	8	37	379.72520997295385	757.4358670127077	2	379.7252197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATVGGQII_	ENSG00000130818|ENST00000253115|ZNF426	21.70233525837049	0.7917639344264583	4				NaN	NaN	0	NaN	10730	3801	14531
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14534	37.194	NaN	1265.7	30	0	159.27	0.035			+	51297	YSCQDCHF	8	51	501.6758876431401	1001.3372223530802	2	501.67626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YSCQDCHF_	REV__ENST00000508784.5_1_4:146681933-146682710:-|nuORF	29.14955571784316	0.7342621283720113	4				NaN	NaN	0	NaN	10731	3801	14531
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14548	37.224	NaN	16824	30	0	3389.2	0.214				-1	GMMVTLLSK	9	71	506.26397352712536	1010.5133941210507	2	506.26422119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_GM(Oxidation (M))M(Oxidation (M))VTLLSK_	ENST00000309137.12_1_16:57207702-57219797:-|nuORF;ENST00000566584.5_2_16:57207702-57208599:-|nuORF;ENST00000567439.5_1_16:57207705-57219792:-|nuORF	71.87747018426188	0.13267044672804276	4				NaN	NaN	0	NaN	10742	3804	14547
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14549	37.227	NaN	1705.4	30	0	191.95	0.106	+			5618	AVCMFLASK	9	61	513.7586538147323	1025.5027546962644	2	513.75927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_AVC(Carbamidomethyl (C))MFLASK_	ENSG00000118971|ENST00000261254|CCND2;nc|ENSG00000118971|P30279-2|CCND2	58.78195531508484	0.22376836668196862	4				NaN	NaN	0	NaN	10743	3804	14547
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14550	37.229	NaN	1020	30	0	279.72	0.034	+			29034	NSTSPPLKL	9	48	478.7740478515625	NaN	0	478.7740478515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NSTSPPLKL_	ENSG00000124406|ENST00000381668|ATP8A1;nc|ENSG00000124406|Q9Y2Q0-2|ATP8A1;nc|ENSG00000124406|Q9Y2Q0-3|ATP8A1	51.19269402634007	0.19847346126499396	4				NaN	NaN	0	NaN	10744	3804	14547
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14566	37.261	NaN	3462	30	0	952.11	0.214	+			44969	TVCDLVLGK	9	59	502.77550846662	1003.53646400004	2	502.77569580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_TVC(Carbamidomethyl (C))DLVLGK_	ENST00000482547.1_1_10:131265539-131334642:+|nuORF;ENST00000482653.1_1_10:131265539-131362121:+|nuORF	90.36981228632155	0.0638227155548745	4				NaN	NaN	0	NaN	10757	3807	14565
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14567	37.264	NaN	1971.5	30	0	347.35	0.034	+			48611	VTSAFLLAK	9	52	475.2892484298407	948.5639439264814	2	475.2889709472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTSAFLLAK_	ENSG00000010270|ENST00000009041|STARD3NL;nc|ENSG00000010270|O95772-2|STARD3NL	60.97194046774394	0.20551255781574032	4				NaN	NaN	0	NaN	10758	3807	14565
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14581	37.294	NaN	1955.1	30	0	794.13	0.213	+			32361	QVADSTFTVLK	11	58	604.8287489489638	1207.6429449647276	2	604.8291625976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QVADSTFTVLK_	ENSG00000050748|ENST00000452135|MAPK9;nc|ENSG00000050748|P45984-2|MAPK9;nc|ENSG00000050748|P45984-3|MAPK9;nc|ENSG00000050748|P45984-4|MAPK9;nc|ENSG00000050748|P45984-5|MAPK9	61.691277971877994	0.30835813808799384	4				NaN	NaN	0	NaN	10769	3810	14580
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14582	37.297	NaN	2135.4	30	0	575.17	0.034	+			41213	SVLEGVLSK	9	57	466.2766518825462	930.5387508318925	2	466.2761535644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVLEGVLSK_	CADPS2|p.N1185Tfs*15|1|0.4|ENSG00000081803|chr7:122345632-122345632|T/-|frameshift_variant;ENSG00000081803|ENST00000449022|CADPS2;nc|ENSG00000081803|Q86UW7-2|CADPS2;nc|ENSG00000081803|Q86UW7-3|CADPS2	96.0336014099291	0.047854655524928534	4				NaN	NaN	0	NaN	10770	3810	14580
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14596	37.327	NaN	893.71	30	0	150.91	0.143	+			7622	DKGFKYTY	8	42	511.2531540567274	NaN	0	511.2532653808594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DKGFKYTY_	tr|U7SYY3|U7SYY3_FUSNUHistidinekinasedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00807PE=4SV=1	39.252832667884924	1.7418937515398478	4				NaN	NaN	0	NaN	10781	3813	14595
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14621	37.386	NaN	1818.5	30	0	428.79	0.143	+			2317	AMLDTVVFK	9	48	520.2783037577216	1038.542054582243	2	520.2793579101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_AM(Oxidation (M))LDTVVFK_	ENSG00000115233|ENST00000409682|PSMD14;ENST00000477232.5_1_2:162241962-162267908:+|nuORF;ENST00000492908.1_1_2:162265323-162267908:+|nuORF	82.24051045832904	0.08786059719216216	4				NaN	NaN	0	NaN	10800	3819	14620
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14632	37.413	NaN	7461.2	30	0	1736.2	0.214			+	18824	ITYKPLDLQ	9	58	545.8128428278694	1089.6111327225387	2	545.814208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ITYKPLDLQ_	REV__ENSG00000182568|ENST00000338745|SATB1;REV__nc|ENSG00000182568|Q01826-2|SATB1	126.24258497203832	0.01742065577488747	4				NaN	NaN	0	NaN	10808	3822	14631
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14633	37.417	NaN	1071.3	30	0	157.42	0.106			+	48669	VTSTDYLY	8	49	481.2284250834299	NaN	0	481.2724304199219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTSTDYLY_	REV__ENST00000342374.4_1_20:43128471-43128573:-|nuORF	44.53106598305862	1.7418937515398478	4				NaN	NaN	0	NaN	10809	3822	14631
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14634	37.419	NaN	1197.8	30	0	170.52	0.106				-1	KGEKGIMVL	9	55	495.7871398925781	NaN	0	495.7871398925781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_KGEKGIM(Oxidation (M))VL_	ENSG00000145912|ENST00000274606|NHP2;ENST00000396362.3_1_7:27087888-27088119:+|nuORF	49.44154591367651	0.21054156626303966	4				NaN	NaN	0	NaN	10810	3822	14631
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14635	37.42	NaN	1455.5	30	0	198.4	0.035	+			29197	NVNAKDNEL	9	46	508.75591119974604	NaN	0	508.7556457519531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NVNAKDNEL_	ENSG00000101445|ENST00000299824|PPP1R16B;nc|ENSG00000101445|Q96T49-2|PPP1R16B;PPP1R16B|p.F497Sfs*24|1|0.06|ENSG00000101445|chr20:38918447-38918447|C/-|frameshift_variant	32.81241826257853	0.3119040447479903	4				NaN	NaN	0	NaN	10811	3822	14631
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14650	37.452	NaN	15069	30	0	2452.6	0.214	+			28433	NEVKIYSL	8	71	483.26850946584295	964.5224659984859	2	483.2689514160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NEVKIYSL_	ENSG00000115761|ENST00000381685|NOL10;ENST00000473087.1_1_2:10822102-10830002:-|nuORF;nc|ENSG00000115761|Q9BSC4-2|NOL10;nc|ENSG00000115761|Q9BSC4-4|NOL10	167.22876102047192	0.09964652365204046	4				NaN	NaN	0	NaN	10823	3825	14649
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14651	37.455	NaN	10373	30	0	2067.7	0.106	+			23554	LAKVGIAL	8	54	392.76809253093705	783.5216321286741	2	392.7684020996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LAKVGIAL_	ENSG00000089154|ENST00000300648|GCN1	134.11898256796542	0.23640168232941985	4				NaN	NaN	0	NaN	10824	3825	14649
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14652	37.457	NaN	3265.3	30	0	1623.9	0.106	+			30512	QAGALLHVY	9	53	486.2690891717361	970.5236254102722	2	486.26934814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QAGALLHVY_	ENSG00000158125|ENST00000379416|XDH	100.27268790702828	0.038923639587553176	4				NaN	NaN	0	NaN	10825	3825	14649
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14653	37.459	NaN	2564.4	30	0	632.64	0.034	+			18899	IVLSAVITK	9	54	472.3127443250697	942.6109357169394	2	472.3133850097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IVLSAVITK_	ENSG00000173821|ENST00000582970|RNF213;ENST00000559070.5_1_17:78261823-78310301:+|nuORF;nc|ENSG00000173821|Q63HN8-4|RNF213;nc|ENSG00000173821|Q63HN8|RNF213;RNF213|p.C5022Lfs*7|1|0.3|ENSG00000173821|chr17:80389237-80389237|G/-|frameshift_variant;RNF213|p.P2167Lfs*64|1|0.09|ENSG00000173821|chr17:80344834-80344835|-/T|frameshift_variant;RNF213|p.Q1953Rfs*50|2|0.13|ENSG00000173821|chr17:80340219-80340219|C/-|frameshift_variant	65.46538089061403	0.16805504838372562	4				NaN	NaN	0	NaN	10826	3825	14649
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14667	37.487	NaN	36110	30	0	10632	0.215	+			20825	KIFYNSGPK	9	73	527.2899690656287	1052.5653851980574	2	527.2903442382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KIFYNSGPK_	ENSG00000083544|ENST00000377881|TDRD3;ENST00000471710.2_1_13:61103135-61109406:+|nuORF;nc|ENSG00000083544|Q9H7E2-2|TDRD3;nc|ENSG00000083544|Q9H7E2|TDRD3	96.19043198914106	0.047412499214244314	4				NaN	NaN	0	NaN	10837	3828	14666
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14668	37.491	NaN	976.93	30	0	197.14	0.106	+			50521	YAPSGNFV	8	37	427.7056188436124	NaN	0	427.70562744140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YAPSGNFV_	ENSG00000111664|ENST00000229264|GNB3;ENSG00000172354|ENST00000303210|GNB2;ENST00000470354.1_1_7:100275135-100275402:+|nuORF;nc|ENSG00000111664|P16520-2|GNB3;nc|ENSG00000172354|P62879-2|GNB2	30.503639358989545	1.7418937515398478	4				NaN	NaN	0	NaN	10838	3828	14666
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14669	37.493	NaN	1456.9	30	0	535.68	0.035	+			36799	SIDKSVSVF	9	48	491.2675004443032	NaN	0	491.2677917480469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SIDKSVSVF_	nc|ENSG00000254769|Q8NGN8|OR4A4P	55.50420428727701	0.16876052142120426	4				NaN	NaN	0	NaN	10839	3828	14666
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14682	37.52	NaN	15719	30	0	5522.8	0.214	+			30635	QASSQTLTL	9	57	474.7533296067088	947.4921062802176	2	474.7529602050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QASSQTLTL_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	112.41091882917199	0.026537921851008135	4				NaN	NaN	0	NaN	10849	3831	14681
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14683	37.524	NaN	2675.2	30	0	1067	0.106	+			18244	IPAAVKLTY	9	60	488.296946108595	974.5793392839901	2	488.297119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IPAAVKLTY_	ENSG00000104517|ENST00000520539|UBR5;nc|ENSG00000104517|O95071-2|UBR5;UBR5|p.E2121Kfs*28|1|0.39|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant;UBR5|p.E2121Rfs*13|1|0.28|ENSG00000104517|chr8:102277120-102277121|-/T|frameshift_variant;UBR5|p.F2571Lfs*4|2|0.31|ENSG00000104517|chr8:102262044-102262044|A/-|frameshift_variant;UBR5|p.K2120Rfs*13|1|0.24|ENSG00000104517|chr8:102277121-102277122|TT/-|frameshift_variant	65.15724298150197	0.17062369902793603	4				NaN	NaN	0	NaN	10850	3831	14681
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14684	37.526	NaN	2572.1	30	0	980.06	0.106			+	13657	GNGLSELLQ	9	57	465.748320599871	929.4820882665421	2	465.7477111816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GNGLSELLQ_	REV__BRAF|p.A404Cfs*9|1|0.18|ENSG00000157764|chr7:140783126-140783127|-/G|frameshift_variant;REV__BRAF|p.P403Cfs*9|1|0.28|ENSG00000157764|chr7:140783127-140783128|GG/-|frameshift_variant;REV__BRAF|p.P403Lfs*8|1|0.35|ENSG00000157764|chr7:140783127-140783127|G/-|frameshift_variant;REV__ENSG00000157764|ENST00000646891|BRAF;REV__ENST00000469930.1_1_7:140534396-140624503:-|nuORF	25.57405402267927	0.5642445186134241	4				NaN	NaN	0	NaN	10851	3831	14681
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14685	37.528	NaN	1892.5	30	0	196.47	0.033	+			29730	PHPDGVTD	8	40	419.1919860839844	NaN	0	419.1919860839844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PHPDGVTD_	L1MEc_dup3336|chr2:240608187-240609964:-|1.13586293163383|0.2420686587065728|2.23|478.0|18|1|sense	50.0245360154114	1.7418937515398478	4				NaN	NaN	0	NaN	10852	3831	14681
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14700	37.559	NaN	2412.2	30	0	469.38	0.141	+			17571	IEALLHTV	8	50	448.2662975958964	894.5180422585928	2	448.26556396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IEALLHTV_	ENSG00000241258|ENST00000395326|CRCP;ENST00000492264.1_1_7:65615923-65617341:+|nuORF;nc|ENSG00000241258|O75575-2|CRCP;nc|ENSG00000241258|O75575-3|CRCP;nc|ENSG00000241258|O75575-4|CRCP	99.37495909608758	0.2510236104623939	4				NaN	NaN	0	NaN	10864	3834	14699
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14726	37.62	NaN	4167.1	30	0	1070.5	0.142	+			12682	GEKGEPGAIL	10	51	485.7640590558805	969.5135651785611	2	485.7637023925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEKGEPGAIL_	COL15A1|p.E1069Rfs*84|1|0.36|ENSG00000204291|chr9:99056264-99056264|A/-|frameshift_variant;COL15A1|p.G1040Efs*113|1|0.1|ENSG00000204291|chr9:99055293-99055293|A/-|frameshift_variant;COL15A1|p.L1176Ifs*39|1|0.32|ENSG00000204291|chr9:99062087-99062088|-/A|frameshift_variant;ENSG00000204291|ENST00000375001|COL15A1	62.107414245175825	0.3466735403679669	4				NaN	NaN	0	NaN	10884	3840	14725
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14754	37.684	NaN	1545.3	30	0	351.91	0.142			+	45824	VAISALSIVA	10	49	472.295092425098	942.575631916996	2	472.2949523925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VAISALSIVA_	REV__ENSG00000175928|ENST00000319331|LRRN1	38.80614096846853	0.5601458937078225	4				NaN	NaN	0	NaN	10906	3846	14753
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14792	37.773	NaN	1501.7	30	0	287.31	0.214			+	25970	LSIQLAGGL	9	52	436.26585516356886	NaN	0	436.2658996582031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSIQLAGGL_	REV__ENST00000333055.8_1_5:180235916-180242536:-|nuORF;REV__ENST00000508090.1_1_5:180236019-180242536:-|nuORF;REV__ENST00000513431.5_1_5:180220053-180242536:-|nuORF;REV__ENST00000514438.1_2_5:180220073-180242536:-|nuORF;REV__ENST00000514760.1_1_5:180222720-180242536:-|nuORF	62.107414245175825	0.1403307765918332	4				NaN	NaN	0	NaN	10935	3855	14791
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14793	37.776	NaN	2149.9	30	0	494.57	0.106			+	27835	MSTQFFISF	9	60	554.2618747367776	1106.509196540355	2	554.2611083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MSTQFFISF_	REV__ENST00000401449.5_1_18:3458286-3458364:+|nuORF	51.33545320467046	0.2872990594074956	4				NaN	NaN	0	NaN	10936	3855	14791
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14794	37.778	NaN	2283.7	30	0	233.81	0.034			+	14913	GTLTSLFSL	9	63	469.76336674048724	NaN	0	469.7640686035156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTLTSLFSL_	REV__CENPP|p.V174Cfs*5|1|0.18|ENSG00000188312|chr9:92379807-92379808|-/T|frameshift_variant;REV__ENSG00000188312|ENST00000375587|CENPP	76.7741389293348	0.08243745921263976	4				NaN	NaN	0	NaN	10937	3855	14791
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14808	37.808	NaN	2754.9	30	0	414.16	0.214	+			7810	DPNEIKVVY	9	60	538.7851437304873	1075.5557345277746	2	538.785888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DPNEIKVVY_	ENSG00000197958|ENST00000361436|RPL12;nc|ENSG00000197958|P30050-2|RPL12;RPL12|p.V42Lfs*15|1|0.26|ENSG00000197958|chr9:127449697-127449697|T/-|frameshift_variant	85.16082228582465	0.07850854922700509	4				NaN	NaN	0	NaN	10948	3858	14807
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14809	37.812	NaN	1251.1	30	0	156.73	0.034	+			43905	TNLKELVL	8	52	465.2869519911601	NaN	0	465.2871398925781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TNLKELVL_	ENST00000409891.5_1_2:175439955-175446055:-|nuORF	68.78682469695295	1.7418937515398478	4				NaN	NaN	0	NaN	10949	3858	14807
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14824	37.843	NaN	4569.6	30	0	849.42	0.214	+			19954	KEGEIIHLI	9	56	526.3113772652565	1050.608201597313	2	526.3123168945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEGEIIHLI_	ENSG00000198087|ENST00000359314|CD2AP;ENST00000463175.1_1_6:47544277-47547315:+|nuORF	66.42927471994793	0.16001998865088202	4				NaN	NaN	0	NaN	10961	3861	14823
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14825	37.847	NaN	3460	30	0	594.77	0.106	+			42319	TAFSSGFLK	9	57	479.25605416434655	NaN	0	479.2558898925781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAFSSGFLK_	ENSG00000138641|ENST00000402738|HERC3	65.46538089061403	0.1260090208616529	4				NaN	NaN	0	NaN	10962	3861	14823
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14826	37.849	NaN	737.26	30	0	153.49	0.036			+	-1	QRNCTKLY	8	37	541.7728271484375	NaN	0	541.7728271484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_QRNC(Carbamidomethyl (C))TKLY_	REV__DNAH7|p.I2732Lfs*15|1|0.34|ENSG00000118997|chr2:195857597-195857597|T/-|frameshift_variant;REV__DNAH7|p.P1564Tfs*5|1|0.25|ENSG00000118997|chr2:195895182-195895183|-/T|frameshift_variant;REV__DNAH7|p.P2310Tfs*50|1|0.14|ENSG00000118997|chr2:195864727-195864728|-/T|frameshift_variant;REV__DNAH7|p.S3691Afs*11|1|0.37|ENSG00000118997|chr2:195775977-195775977|T/-|frameshift_variant;REV__DNAH7|p.T2935Ifs*12|1|0.24|ENSG00000118997|chr2:195845142-195845143|AG/-|frameshift_variant;REV__ENSG00000118997|ENST00000312428|DNAH7	37.15910966729921	1.7418937515398478	4				NaN	NaN	0	NaN	10963	3861	14823
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14838	37.873	NaN	1635.1	30	0	163.38	0.142	+			22593	KTSVFQALA	9	54	482.7767608957206	NaN	0	482.77691650390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTSVFQALA_	ENST00000492333.5_1_3:45879526-45957062:-|nuORF	45.97224482568171	0.23445038899310136	4				NaN	NaN	0	NaN	10972	3864	14837
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14849	37.899	NaN	4022.1	30	0	611.9	0.214				-1	KNRFMLVIA	9	66	554.3200306520138	1106.6255083708274	2	554.3203735351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_KNRFM(Oxidation (M))LVIA_	ENST00000396821.7_1_22:38879728-38879824:-|nuORF	47.91560031466742	0.327412564698279	4				NaN	NaN	0	NaN	10980	3867	14848
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14850	37.903	NaN	1012	30	0	160.52	0.034			+	7649	DKQFVLGK	8	50	467.7715379280841	NaN	0	467.7724304199219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DKQFVLGK_	REV__ENSG00000107960|ENST00000224950|STN1;REV__ENST00000466828.5_1_10:105642444-105658073:-|nuORF	71.87747018426188	1.7418937515398478	4				NaN	NaN	0	NaN	10981	3867	14848
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14861	37.927	NaN	4415.4	30	0	899.98	0.214	+			16269	HEGDIILKI	9	61	519.3033782320614	1036.5922035309227	2	519.3037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HEGDIILKI_	ENSG00000119139|ENST00000377245|TJP2;nc|ENSG00000119139|Q9UDY2-2|TJP2;nc|ENSG00000119139|Q9UDY2-3|TJP2;nc|ENSG00000119139|Q9UDY2-4|TJP2;nc|ENSG00000119139|Q9UDY2-5|TJP2;nc|ENSG00000119139|Q9UDY2-6|TJP2;nc|ENSG00000119139|Q9UDY2-7|TJP2;TJP2|p.F813Sfs*12|1|0.23|ENSG00000119139|chr9:69240013-69240013|T/-|frameshift_variant;TJP2|p.P484Qfs*30|1|0.18|ENSG00000119139|chr9:69228107-69228107|C/-|frameshift_variant;TJP2|p.T849Rfs*12|1|0.32|ENSG00000119139|chr9:69240120-69240120|A/-|frameshift_variant	104.01359247289065	0.03510646158778409	4				NaN	NaN	0	NaN	10989	3870	14860
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14862	37.931	NaN	3981.9	30	0	559.24	0.106	+			51066	YLKQVLGQ	8	62	474.7796881673149	947.5448234014298	2	474.7796936035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YLKQVLGQ_	ENSG00000159377|ENST00000290541|PSMB4;ENST00000476467.1_1_1:151372063-151372664:+|nuORF;ENST00000493673.1_1_1:151372075-151372920:+|nuORF;ENST00000495288.5_1_1:151372054-151373071:+|nuORF	55.50420428727701	0.5462892107279674	4				NaN	NaN	0	NaN	10990	3870	14860
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14863	37.933	NaN	878.46	30	0	396.51	0.035	+			30565	QAMAKYMAL	9	40	513.7592229727984	1025.5038930123967	2	513.7593383789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QAMAKYMAL_	ENSG00000145555|ENST00000513610|MYO10;nc|ENSG00000145555|Q9HD67-3|MYO10	31.954861631926434	0.5046124803899898	4				NaN	NaN	0	NaN	10991	3870	14860
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14874	37.957	NaN	3110.2	30	0	615.08	0.142	+			46440	VESGKLFSV	9	64	483.26907408293056	964.5235952326611	2	483.2690734863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VESGKLFSV_	ENSG00000030066|ENST00000378460|NUP160;ENST00000529863.1_1_11:47861610-47869870:-|nuORF;nc|ENSG00000030066|Q12769-2|NUP160;nc|ENSG00000030066|Q12769|NUP160	81.52500206392136	0.09095445986635249	4				NaN	NaN	0	NaN	10999	3873	14873
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14896	38.01	NaN	4273.3	30	0	843.98	0.214	+			35073	SAFGVIIEK	9	51	482.27920125918536	962.5438495851707	2	482.279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAFGVIIEK_	ENSG00000178440|ENST00000651763|TIMM23B-AGAP6;ENSG00000204152|ENST00000651259|TIMM23B;ENSG00000265354|ENST00000580018|TIMM23;nc|ENSG00000204152|Q5SRD1-2|TIMM23B	120.30596017624542	0.02101454110788768	4				NaN	NaN	0	NaN	11015	3879	14895
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14897	38.014	NaN	1195	30	0	186.01	0.034	+			28873	NQAADDHAL	9	53	477.7176062388277	NaN	0	477.7176818847656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NQAADDHAL_	ENSG00000123360|ENST00000243052|PDE1B;nc|ENSG00000123360|Q01064-2|PDE1B	42.396135135203025	0.2590952873412954	4				NaN	NaN	0	NaN	11016	3879	14895
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14918	38.065	NaN	6300.4	30	0	1535.2	0.214	+			37376	SLFSGSFSK	9	60	480.24522677608604	958.4759006189721	2	480.2449035644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLFSGSFSK_	ENST00000264716.8_1_2:28615973-28616156:+|nuORF	70.8162118820467	0.13725933411854815	4				NaN	NaN	0	NaN	11031	3885	14917
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14919	38.068	NaN	1632.9	30	0	625.49	0.106	+			35677	SDGKIALPEK	10	52	529.2988924838531	NaN	0	529.2984008789062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SDGKIALPEK_	ENSG00000143952|ENST00000272322|VPS54;nc|ENSG00000143952|Q9P1Q0-2|VPS54;nc|ENSG00000143952|Q9P1Q0-3|VPS54;nc|ENSG00000143952|Q9P1Q0-4|VPS54	41.42661286455405	0.3598046802465243	4				NaN	NaN	0	NaN	11032	3885	14917
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14920	38.07	NaN	1403.1	30	0	194.42	0.106	+			12019	FWNPPVEM	8	56	510.2386779785156	NaN	0	510.2386779785156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FWNPPVEM_	ENST00000383678.6_1_3:112718384-112719759:+|nuORF	50.0245360154114	1.7418937515398478	4				NaN	NaN	0	NaN	11033	3885	14917
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14921	38.072	NaN	1447.6	30	0	117.05	0.106	+			24030	LEETIIQK	8	53	487.2811279296875	NaN	0	487.2811279296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LEETIIQK_	ENSG00000107862|ENST00000369983|GBF1;GBF1|p.D1798Tfs*11|1|0.46|ENSG00000107862|chr10:102382143-102382143|C/-|frameshift_variant;GBF1|p.S1486Tfs*46|1|0.17|ENSG00000107862|chr10:102377105-102377106|-/C|frameshift_variant;nc|ENSG00000107862|Q92538-1|GBF1;nc|ENSG00000107862|Q92538-2|GBF1;nc|ENSG00000107862|Q92538-3|GBF1	47.91560031466742	1.7418937515398478	4				NaN	NaN	0	NaN	11034	3885	14917
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14922	38.074	NaN	1009.7	30	0	69.601	0.106				-1	SGFCSITLF	9	50	516.2454223632812	NaN	0	516.2454223632812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_SGFC(Carbamidomethyl (C))SITLF_	L1MC1_dup2138|chr3:11203375-11203979:-|1.868897465743888|0.2278259033593264|3.04|481.0|25|1|anti-sense	37.15910966729921	0.2899585034171616	4				NaN	NaN	0	NaN	11035	3885	14917
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14923	38.076	NaN	1532.8	30	0	187.34	0.035	+			30458	QAAMPQVSY	9	50	497.73626828224747	993.457983631295	2	497.7365417480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QAAMPQVSY_	ENSG00000176903|ENST00000316836|PNMA1	54.776311868738084	0.25715957988447635	4				NaN	NaN	0	NaN	11036	3885	14917
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14936	38.102	NaN	29422	30	0	5109.4	0.214	+			7259	DALVITHY	8	65	466.2475917742045	930.4806306152091	2	466.24749755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DALVITHY_	ENSG00000109917|ENST00000227322|ZPR1	148.20599733432147	0.2406086923697642	4				NaN	NaN	0	NaN	11046	3888	14935
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14937	38.106	NaN	3406.9	30	0	623.04	0.106	+			31029	QETTYVSNL	9	59	527.7559150601661	1053.497277187132	2	527.7564086914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QETTYVSNL_	ENSG00000198522|ENST00000610189|GPN1;nc|ENSG00000198522|Q9HCN4-2|GPN1;nc|ENSG00000198522|Q9HCN4-3|GPN1;nc|ENSG00000198522|Q9HCN4-4|GPN1;nc|ENSG00000198522|Q9HCN4-5|GPN1	101.25262130126117	0.03792372629710479	4				NaN	NaN	0	NaN	11047	3888	14935
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14938	38.108	NaN	1158	30	0	100.83	0.106	+			35943	SEGKCFSVL	9	50	485.2388636297752	NaN	0	485.23883056640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEGKCFSVL_	ENSG00000079246|ENST00000392132|XRCC5;XRCC5|p.Q488Rfs*29|1|0.06|ENSG00000079246|chr2:216141305-216141305|C/-|frameshift_variant	52.936696900407355	0.1864545979552969	4				NaN	NaN	0	NaN	11048	3888	14935
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14939	38.11	NaN	1562.5	30	0	294.89	0.106	+			21207	KLFDFVNAK	9	54	541.3053116831709	1080.5960704331417	2	541.3054809570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KLFDFVNAK_	ENSG00000149136|ENST00000278412|SSRP1;ENST00000293880.9_1_11:57098199-57100416:-|nuORF	30.317721548370564	0.5199124245378496	4				NaN	NaN	0	NaN	11049	3888	14935
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14940	38.111	NaN	1306.9	30	0	147.14	0.106	+			18420	ISAKVFIDK	9	57	510.80865757498776	NaN	0	510.7403259277344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ISAKVFIDK_	ENSG00000048740|ENST00000633077|CELF2;nc|ENSG00000048740|O95319-2|CELF2;nc|ENSG00000048740|O95319-3|CELF2;nc|ENSG00000048740|O95319-4|CELF2;nc|ENSG00000048740|O95319-5|CELF2;nc|ENSG00000048740|O95319|CELF2	67.49366992349736	0.1173583512313808	4				NaN	NaN	0	NaN	11050	3888	14935
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14941	38.113	NaN	1625.4	30	0	540.57	0.034	+			9423	EKITLSPR	8	56	472.28168069448196	942.548808455764	2	472.2815856933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EKITLSPR_	nc|nan|Q8WVX3-2|C4orf3	44.377184641726394	0.6291511924298419	4				NaN	NaN	0	NaN	11051	3888	14935
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14952	38.137	NaN	8279	30	0	1776.7	0.214	+			245	AAMLDTVVFK	10	63	555.7968820720581	1109.5792112109161	2	555.7973022460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_AAM(Oxidation (M))LDTVVFK_	ENSG00000115233|ENST00000409682|PSMD14;ENST00000477232.5_1_2:162241962-162267908:+|nuORF;ENST00000492908.1_1_2:162265323-162267908:+|nuORF	120.8684288430529	0.026103207050128037	4				NaN	NaN	0	NaN	11059	3891	14951
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14953	38.141	NaN	1234.7	30	0	243.02	0.035			+	45135	TVKVQSFLV	9	43	510.80865757498776	NaN	0	510.8078308105469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVKVQSFLV_	REV__ENSG00000157212|ENST00000404141|PAXIP1;REV__ENST00000457196.5_1_7:154735861-154782774:-|nuORF;REV__ENST00000475066.1_1_7:154759501-154775093:-|nuORF;REV__nc|ENSG00000157212|Q6ZW49-1|PAXIP1;REV__nc|ENSG00000157212|Q6ZW49-2|PAXIP1	45.97224482568171	0.23445038899310136	4				NaN	NaN	0	NaN	11060	3891	14951
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14964	38.166	NaN	753.56	30	0	131.67	0.214	+			37275	SLAGPLQK	8	34	407.2447509765625	NaN	0	407.2447509765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLAGPLQK_	nc|ENSG00000003137|Q9NR63-3|CYP26B1	26.79610172149135	1.7418937515398478	4				NaN	NaN	0	NaN	11068	3894	14963
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14965	38.169	NaN	645.34	30	0	105.55	0.034			+	41987	SVYGPVTAL	9	35	453.7513732910156	NaN	0	453.7513732910156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVYGPVTAL_	REV__ENSG00000003400|ENST00000286186|CASP10;REV__nc|ENSG00000003400|Q92851-2|CASP10;REV__nc|ENSG00000003400|Q92851-5|CASP10;REV__nc|ENSG00000003400|Q92851-6|CASP10;REV__nc|ENSG00000003400|Q92851|CASP10	51.33545320467046	0.19748963086191895	4				NaN	NaN	0	NaN	11069	3894	14963
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14988	38.222	NaN	1171.1	30	0	314.02	0.143			+	47743	VSGLGVISPL	10	45	471.2867878857109	940.5590228382218	2	471.28692626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSGLGVISPL_	REV__ENST00000378700.7_2_6:19837725-19837965:+|nuORF	40.77816245573522	0.5419747034533848	4				NaN	NaN	0	NaN	11086	3900	14987
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15011	38.276	NaN	1058.8	30	0	372.38	0.143			+	43628	TINYHPSY	8	48	497.73626828224747	993.457983631295	2	498.2377014160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TINYHPSY_	REV__HDAC11|p.R23H|1|0.1|ENSG00000163517|chr3:13481311-13481311|G/A|missense_variant	34.172542307311794	0.6954784234644539	4				NaN	NaN	0	NaN	11103	3906	15010
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15023	38.303	NaN	4142.9	30	0	656.74	0.214	+			1415	AEVVLAHL	8	49	426.2528189019385	850.491084870677	2	426.2528381347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEVVLAHL_	ENSG00000163902|ENST00000296255|RPN1;ENST00000481168.1_1_3:128363760-128369658:-|nuORF;ENST00000497415.1_1_3:128359957-128369658:-|nuORF	119.22118168366049	0.23566888071072137	4				NaN	NaN	0	NaN	11112	3909	15022
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15024	38.306	NaN	3560.5	30	0	778.46	0.036	+			40858	SVFEDPVISK	10	56	560.7984034092729	1119.5822538853456	2	560.798583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVFEDPVISK_	ENSG00000125445|ENST00000245539|MRPS7;MRPS7|p.L162Pfs*29|1|0.05|ENSG00000125445|chr17:75263482-75263483|-/C|frameshift_variant	68.62578634547417	0.2885473079336931	4				NaN	NaN	0	NaN	11113	3909	15022
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15035	38.331	NaN	2437.6	30	0	264.95	0.214			+	31418	QKLQLVIQK	9	59	549.3561409133866	1096.6977288935732	2	549.3564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QKLQLVIQK_	REV__CCBE1|p.T211I|1|0.3|ENSG00000183287|chr18:59454873-59454873|G/A|missense_variant	104.0567914643314	0.03506238181059741	4				NaN	NaN	0	NaN	11121	3912	15034
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15036	38.335	NaN	1886.8	30	0	777.88	0.036			+	46169	VDVGDLAVTY	10	41	526.2686092875628	1050.5226656419254	2	526.27001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VDVGDLAVTY_	REV__ENST00000261439.8_1_4:38139186-38139444:+|nuORF	34.172542307311794	0.6007644933930345	4				NaN	NaN	0	NaN	11122	3912	15034
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15048	38.36	NaN	3036.3	30	0	431.75	0.142	+			40552	SVADLAFAH	9	57	465.7381786616989	929.4618043901978	2	465.73773193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVADLAFAH_	EDC4|p.D801Mfs*15|1|0.26|ENSG00000038358|chr16:67880857-67880857|G/-|frameshift_variant;EDC4|p.Q792Sfs*24|1|0.37|ENSG00000038358|chr16:67880829-67880829|C/-|frameshift_variant;ENSG00000038358|ENST00000358933|EDC4;ENST00000536072.6_1_16:67909906-67914140:+|nuORF;ENST00000572221.5_1_16:67909733-67911757:+|nuORF	82.30502934623384	0.08758161712619916	4				NaN	NaN	0	NaN	11131	3915	15047
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15070	38.413	NaN	1009.7	30	0	164.66	0.214			+	36193	SELKVVSL	8	42	437.7656658545182	NaN	0	437.76605224609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SELKVVSL_	REV__ENSG00000117000|ENST00000372771|RLF;REV__RLF|p.N1741Ifs*21|1|0.18|ENSG00000117000|chr1:40239919-40239919|A/-|frameshift_variant;REV__RLF|p.V1739Kfs*12|1|0.09|ENSG00000117000|chr1:40239916-40239917|TG/-|frameshift_variant	60.97194046774394	1.7418937515398478	4				NaN	NaN	0	NaN	11147	3921	15069
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15071	38.417	NaN	2029	30	0	933.4	0.036	+			30647	QATKLILNY	9	53	532.312188487001	NaN	0	532.3132934570312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QATKLILNY_	ENSG00000196712|ENST00000358273|NF1;ENST00000493220.5_2_17:29552193-29556516:+|nuORF;ENST00000495910.6_1_17:29490228-29576996:+|nuORF;nc|ENSG00000196712|P21359-2|NF1;nc|ENSG00000196712|P21359-4|NF1;nc|ENSG00000196712|P21359-6|NF1;NF1|p.D946*|1|0.2|ENSG00000196712|chr17:31229444-31229445|-/T|frameshift_variant;NF1|p.F2429Qfs*7|1|0.17|ENSG00000196712|chr17:31349214-31349215|-/CAAGTAAGAATTAATT|frameshift_variant;NF1|p.K1386Rfs*20|1|0.33|ENSG00000196712|chr17:31252978-31252978|A/-|frameshift_variant	64.20726635412375	0.13137488984569443	4				NaN	NaN	0	NaN	11148	3921	15069
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15084	38.444	NaN	1913.7	30	0	189.78	0.143	+			14274	GSVELPIVGK	10	61	499.79752290621946	997.5804928792389	2	499.7983703613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSVELPIVGK_	ENSG00000240849|ENST00000371652|PEDS1;ENST00000453505.6_1_20:48741597-48767785:-|nuORF	80.45461616416974	0.1919067876629769	4				NaN	NaN	0	NaN	11158	3924	15083
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15109	38.504	NaN	2265.5	30	0	374.42	0.144	+			246	AAMLDTVVFK	10	64	555.7968820720581	1109.5792112109161	2	555.7979125976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_AAM(Oxidation (M))LDTVVFK_	ENSG00000115233|ENST00000409682|PSMD14;ENST00000477232.5_1_2:162241962-162267908:+|nuORF;ENST00000492908.1_1_2:162265323-162267908:+|nuORF	68.84614121027924	0.2867470276772903	4				NaN	NaN	0	NaN	11177	3930	15108
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15136	38.565	NaN	15004	30	0	4829.1	0.214	+			40838	SVELPIVGK	9	63	471.2867878857109	940.5590228382218	2	471.28662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVELPIVGK_	ENSG00000240849|ENST00000371652|PEDS1;ENST00000453505.6_1_20:48741597-48767785:-|nuORF	64.20726635412375	0.17854274437659667	4				NaN	NaN	0	NaN	11198	3936	15135
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15137	38.568	NaN	1094.2	30	0	137.78	0.035	+			49149	VVMEWAGVK	9	53	509.7731283531391	NaN	0	509.7730712890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVMEWAGVK_	ENST00000436108.6_1_11:908570-910828:-|nuORF;ENST00000528426.5_1_11:908570-910751:-|nuORF;ENST00000531859.5_2_11:908570-908654:-|nuORF	47.657333605630114	0.2228375344433429	4				NaN	NaN	0	NaN	11199	3936	15135
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15150	38.595	NaN	1209.4	30	0	176.94	0.143				-1	QHYVTMEL	8	51	518.7421367723299	1035.4697206114597	2	518.742431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_QHYVTM(Oxidation (M))EL_	ENSG00000198793|ENST00000361445|MTOR;MTOR|p.F821Lfs*34|1|0.28|ENSG00000198793|chr1:11232487-11232487|A/-|frameshift_variant;MTOR|p.R53Q|1|0.2|ENSG00000198793|chr1:11259252-11259252|C/T|missense_variant	42.47446043378293	0.6409579893742323	4				NaN	NaN	0	NaN	11209	3939	15149
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15161	38.621	NaN	1751	30	0	234.73	0.144	+			27673	MPTQEVQEL	9	49	537.7597386539808	1073.5049243747615	2	537.7606811523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MPTQEVQEL_	ENSG00000109046|ENST00000262394|WSB1;ENST00000467843.6_1_17:25636020-25639392:+|nuORF;nc|ENSG00000109046|Q9Y6I7-2|WSB1;nc|ENSG00000109046|Q9Y6I7-4|WSB1	56.632244143249146	0.24168844994051353	4				NaN	NaN	0	NaN	11217	3942	15160
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15172	38.648	NaN	1127.2	30	0	223.39	0.214	+			27573	MPFVHVVY	8	43	504.25423316694497	1006.49391340069	2	504.2550964355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))PFVHVVY_	ENST00000602122.5_1_19:35739636-35739768:+|nuORF	67.3271909547111	0.42924334279516513	4				NaN	NaN	0	NaN	11225	3945	15171
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15173	38.651	NaN	2048.6	30	0	380.67	0.035	+			47067	VLHFGKYR	8	66	510.2945145840437	1018.5744762348875	2	510.7960510253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VLHFGKYR_	ENSG00000197771|ENST00000369077|MCMBP;ENST00000466047.5_1_10:121609046-121633060:-|nuORF;nc|ENSG00000197771|Q9BTE3|MCMBP	33.51558372728122	0.7005509609380386	4				NaN	NaN	0	NaN	11226	3945	15171
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15184	38.676	NaN	1289.3	30	0	100.68	0.145	+			28870	NPYSGDLTKF	10	56	571.279855129812	1140.5451573264238	2	571.2801513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NPYSGDLTKF_	ENSG00000143569|ENST00000428931|UBAP2L;nc|ENSG00000143569|Q14157-1|UBAP2L;nc|ENSG00000143569|Q14157-3|UBAP2L;nc|ENSG00000143569|Q14157-4|UBAP2L;nc|ENSG00000143569|Q14157-5|UBAP2L	49.46582953369473	0.46192220282894864	4				NaN	NaN	0	NaN	11234	3948	15183
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15197	38.705	NaN	1533.4	30	0	249.98	0.214	+			42497	TANSIMASY	9	55	479.2207743618881	NaN	0	479.2207946777344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TANSIMASY_	ENSG00000070061|ENST00000374647|ELP1	85.16082228582465	0.053699699744190164	4				NaN	NaN	0	NaN	11244	3951	15196
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15198	38.708	NaN	3355.7	30	0	1284	0.034	+			11073	FETFNTPA	8	48	463.7160011223049	925.4174493114098	2	463.71551513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FETFNTPA_	ACTB|p.M132T|1|0.15|ENSG00000075624|chr7:5528688-5528688|A/G|missense_variant;ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196604|ENST00000409914|POTEF;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000403258.1_1_6:88986231-88986483:-|nuORF;ENST00000415776.1_1_Y:19869357-19869702:-|nuORF;ENST00000418987.2_1_9:103493819-103494230:+|nuORF;ENST00000428275.1_1_X:53172669-53172729:-|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000570019.1_1_15:34666200-34666557:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENST00000587663.1_1_18:60109485-60109668:+|nuORF;nc|ENSG00000204434|Q9BYX7|POTEKP	82.24051045832904	0.30490469762271794	4				NaN	NaN	0	NaN	11245	3951	15196
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15220	38.76	NaN	3432.3	30	0	592.27	0.143	+			31774	QPIAPQTTF	9	60	501.7661710875991	1001.5177892419982	2	501.7660217285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QPIAPQTTF_	CCAR1|p.E816Kfs*75|1|0.25|ENSG00000060339|chr10:68771347-68771347|A/-|frameshift_variant;CCAR1|p.S739Vfs*11|1|0.47|ENSG00000060339|chr10:68765992-68765992|A/-|frameshift_variant;ENSG00000060339|ENST00000265872|CCAR1;nc|ENSG00000060339|Q8IX12-2|CCAR1	101.60071028292904	0.0375685401170269	4				NaN	NaN	0	NaN	11261	3957	15219
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15231	38.787	NaN	3097	30	0	420.79	0.214	+			14275	GSVELPIVGK	10	56	499.79752290621946	997.5804928792389	2	499.7975158691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSVELPIVGK_	ENSG00000240849|ENST00000371652|PEDS1;ENST00000453505.6_1_20:48741597-48767785:-|nuORF	107.00750918261382	0.05688644658934505	4				NaN	NaN	0	NaN	11269	3960	15230
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15232	38.79	NaN	1138.4	30	0	141.42	0.106	+			51100	YLSVCNPL	8	35	454.73063472456505	NaN	0	454.7304992675781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YLSVCNPL_	ENSG00000197081|ENST00000356956|IGF2R;IGF2R|p.D1317Tfs*27|3|0.42|ENSG00000197081|chr6:160064456-160064456|G/-|frameshift_variant;IGF2R|p.D2163Tfs*2|1|0.16|ENSG00000197081|chr6:160089932-160089932|G/-|frameshift_variant;IGF2R|p.G2426Efs*10|1|0.25|ENSG00000197081|chr6:160104882-160104882|G/-|frameshift_variant	57.81127852772723	1.7418937515398478	4				NaN	NaN	0	NaN	11270	3960	15230
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15233	38.792	NaN	635.1	30	0	71.2	0.106	+			46760	VGSTLGGLL	9	35	408.74578857421875	NaN	0	408.74578857421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VGSTLGGLL_	ENSG00000137809|ENST00000315757|ITGA11;nc|ENSG00000137809|Q9UKX5-2|ITGA11	20.481830146152948	0.3676602570045296	4				NaN	NaN	0	NaN	11271	3960	15230
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15234	38.794	NaN	1023.5	30	0	199.03	0.106			+	21304	KLSPQGESL	9	43	479.76364851453224	957.5127440958645	2	479.7630615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KLSPQGESL_	REV__ENSG00000120211|ENST00000239316|INSL4	44.116797842482775	0.37197099687881774	4				NaN	NaN	0	NaN	11272	3960	15230
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15235	38.796	NaN	816.5	30	0	126.09	0.035			+	18873	IVGSPDERL	9	42	493.2702941894531	NaN	0	493.2702941894531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IVGSPDERL_	REV__CNKSR2|p.Y594Ifs*15|1|0.62|ENSG00000149970|chrX:21591137-21591138|-/A|frameshift_variant;REV__ENSG00000149970|ENST00000379510|CNKSR2;REV__nc|ENSG00000149970|Q8WXI2-2|CNKSR2;REV__nc|ENSG00000149970|Q8WXI2-5|CNKSR2	30.317721548370564	0.32449924987115025	4				NaN	NaN	0	NaN	11273	3960	15230
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15244	38.816	NaN	1100	30	0	484.28	0.143	+			9509	EKVINYLV	8	39	489.28659328874954	NaN	0	489.28680419921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EKVINYLV_	ENSG00000123584|ENST00000243314|MAGEA9;ENSG00000267978|ENST00000595065|MAGEA9B	37.15910966729921	1.7418937515398478	4				NaN	NaN	0	NaN	11279	3963	15243
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15252	38.836	NaN	1546.9	30	0	355.93	0.143	+			21010	KKGTTGCTDV	10	52	505.2533626566239	1008.4921723800478	2	505.2533874511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KKGTTGCTDV_	ENSG00000138829|ENST00000262464|FBN2;FBN2|p.D2138Tfs*111|3|0.3|ENSG00000138829|chr5:128290765-128290765|C/-|frameshift_variant;FBN2|p.I2832Sfs*65|1|0.4|ENSG00000138829|chr5:128259700-128259700|T/-|frameshift_variant;FBN2|p.Y2717Lfs*24|1|0.17|ENSG00000138829|chr5:128263469-128263470|-/C|frameshift_variant;nc|ENSG00000138829|P35556-2|FBN2	45.02220120713402	0.5028680121232791	4				NaN	NaN	0	NaN	11284	3966	15251
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15265	38.865	NaN	1748.2	30	0	657.44	0.144	+			30801	QEALKYTVL	9	55	532.8033036821645	1063.5920544311289	2	532.8043823242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QEALKYTVL_	ENSG00000162542|ENST00000294543|TMCO4;nc|ENSG00000162542|Q5TGY1-2|TMCO4;TMCO4|p.F412Lfs*180|1|0.26|ENSG00000162542|chr1:19737399-19737400|AG/-|frameshift_variant	42.86426827375447	0.38666266728046506	4				NaN	NaN	0	NaN	11294	3969	15264
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15285	38.916	NaN	11574	30	0	4033.6	0.214	+			40839	SVELPIVGK	9	63	471.2867878857109	940.5590228382218	2	471.2867126464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVELPIVGK_	ENSG00000240849|ENST00000371652|PEDS1;ENST00000453505.6_1_20:48741597-48767785:-|nuORF	95.81516180277367	0.04847050768394289	4				NaN	NaN	0	NaN	11308	3975	15284
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15286	38.919	NaN	987.27	30	0	82.47	0.106	+			37568	SLMSALAAR	9	47	460.25408935546875	NaN	0	460.25408935546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLMSALAAR_	ENSG00000065911|ENST00000394053|MTHFD2;ENST00000477455.5_1_2:74425768-74433128:+|nuORF;ENST00000488086.1_1_2:74425768-74433063:+|nuORF	52.936696900407355	0.1864545979552969	4				NaN	NaN	0	NaN	11309	3975	15284
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15287	38.921	NaN	1005.3	30	0	222.84	0.106			+	-1	LTDGLCSRI	9	43	517.7665405273438	NaN	0	517.7665405273438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LTDGLC(Carbamidomethyl (C))SRI_	REV__ENSG00000146830|ENST00000678049|GIGYF1	39.252832667884924	0.27938773122138094	4				NaN	NaN	0	NaN	11310	3975	15284
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15288	38.923	NaN	920.98	30	0	217.42	0.035	+			48618	VTSFAELAKG	10	41	511.7792309345493	1021.5439089358986	2	511.77947998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTSFAELAKG_	ENSG00000198853|ENST00000361226|RUSC2;RUSC2|p.A585Pfs*62|2|0.49|ENSG00000198853|chr9:35548269-35548269|G/-|frameshift_variant	47.657333605630114	0.47858658696240314	4				NaN	NaN	0	NaN	11311	3975	15284
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15300	38.948	NaN	6052.3	30	0	2636.6	0.214			+	44938	TVAQLILK	8	45	443.2922946376693	884.5700363421386	2	443.291748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVAQLILK_	REV__ENSG00000000460|ENST00000359326|C1orf112;REV__ENST00000498289.5_1_1:169773308-169819597:+|nuORF;REV__nc|ENSG00000000460|Q9NSG2-2|FIRRM;REV__nc|ENSG00000000460|Q9NSG2-3|FIRRM	82.30502934623384	0.30436709589983096	4				NaN	NaN	0	NaN	11320	3978	15299
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15301	38.952	NaN	2083.7	30	0	482.94	0.106	+			3095	ASGGIFVLK	9	46	446.2685241699219	NaN	0	446.2685241699219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASGGIFVLK_	ENSG00000030066|ENST00000378460|NUP160;ENST00000526870.1_3_11:47861380-47861614:-|nuORF;nc|ENSG00000030066|Q12769|NUP160	122.1759843771914	0.0017947759793136662	4				NaN	NaN	0	NaN	11321	3978	15299
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15302	38.954	NaN	885.05	30	0	184.95	0.106			+	16548	HEVPGESQM	9	39	515.2185033750887	NaN	0	515.2186889648438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_HEVPGESQM(Oxidation (M))_	REV__ENSG00000047410|ENST00000367478|TPR;REV__TPR|p.P2083Qfs*3|1|0.31|ENSG00000047410|chr1:186323735-186323735|G/-|frameshift_variant;REV__TPR|p.T2133Lfs*63|1|0.03|ENSG00000047410|chr1:186322382-186322383|-/GTACTAATAAG|frameshift_variant	45.9519527083369	0.2345902329052062	4				NaN	NaN	0	NaN	11322	3978	15299
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15303	38.956	NaN	1226.1	30	0	520.88	0.031	+			17871	IGAAAGIAL	9	39	378.73588841463635	NaN	0	378.7360534667969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IGAAAGIAL_	ENSG00000130055|ENST00000374382|GDPD2;GDPD2|p.M234Cfs*8|2|0.19|ENSG00000130055|chrX:70427004-70427004|C/-|frameshift_variant;nc|ENSG00000130055|Q9HCC8-2|GDPD2;nc|ENSG00000130055|Q9HCC8-3|GDPD2	21.70233525837049	0.3635294413921169	4				NaN	NaN	0	NaN	11323	3978	15299
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15315	38.981	NaN	5270.8	30	0	1011.3	0.143	+			38721	SSLFSLLSK	9	63	491.28458502862077	980.5546171240416	2	491.7862243652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSLFSLLSK_	ENSG00000141627|ENST00000675505|DYM	93.19546047674547	0.05585629608842056	4				NaN	NaN	0	NaN	11332	3981	15314
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15330	39.015	NaN	927.14	30	0	176.57	0.142	+			2506	APTSSAYEF	9	46	486.7189573306881	NaN	0	486.7192687988281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_APTSSAYEF_	ENSG00000104973|ENST00000312865|MED25;ENST00000593636.1_1_19:50321571-50322554:+|nuORF;MED25|p.A202Gfs*197|1|0.36|ENSG00000104973|chr19:49829855-49829856|-/C|frameshift_variant;MED25|p.P201Rfs*13|3|0.22|ENSG00000104973|chr19:49829856-49829856|C/-|frameshift_variant;nc|ENSG00000104973|Q71SY5-4|MED25;nc|ENSG00000104973|Q71SY5-5|MED25	63.30626980617807	0.13521764763214936	4				NaN	NaN	0	NaN	11344	3984	15329
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15345	39.048	NaN	1641.4	30	0	238.57	0.214	+			27784	MRRSDNKM	8	54	519.2517993573654	1036.4890457815306	2	519.2522583007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MRRSDNKM_	ENST00000357388.7_1_3:160117314-160117401:+|nuORF	45.9519527083369	0.6193794311207887	4				NaN	NaN	0	NaN	11356	3987	15344
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15346	39.052	NaN	1850	30	0	214.91	0.034	+			35558	SAVTALWGK	9	54	466.76418267410975	931.5138124150195	2	466.76385498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAVTALWGK_	ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF	93.1432384553994	0.056003526918089595	4				NaN	NaN	0	NaN	11357	3987	15344
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15358	39.077	NaN	2738.9	30	0	518.22	0.144	+			48495	VTNDFVMLK	9	63	533.783972418056	1065.553391902912	2	533.7850952148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTNDFVMLK_	ENSG00000100316|ENST00000216146|RPL3;ENST00000417615.1_1_14:99439218-99439536:-|nuORF;ENST00000473638.5_1_22:39708982-39709710:-|nuORF	123.20810148215591	0.019257656778428764	4				NaN	NaN	0	NaN	11366	3990	15357
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15371	39.106	NaN	1376.7	30	0	318.35	0.143	+			31054	QEWEVKAL	8	45	501.76655956655287	NaN	0	501.76678466796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QEWEVKAL_	ENSG00000227057|ENST00000374617|WDR46	51.33545320467046	1.7418937515398478	4				NaN	NaN	0	NaN	11376	3993	15370
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15389	39.153	NaN	2937.1	30	0	831.84	0.214	+			41944	SVVSIVIGK	9	56	451.28961532289077	900.5646777125816	2	451.28955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVVSIVIGK_	nc|ENSG00000136144|Q8NDN9-2|RCBTB1	87.69643885390035	0.07135982304947239	4				NaN	NaN	0	NaN	11388	3999	15388
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15390	39.157	NaN	2486	30	0	1064.7	0.106	+			38122	SPVTPVPTM	9	47	464.74410586717664	NaN	0	464.7444152832031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SPVTPVPTM_	ENSG00000170608|ENST00000302177|FOXA3;FOXA3|p.P52Lfs*87|1|0.2|ENSG00000170608|chr19:45872156-45872156|C/-|frameshift_variant	45.9519527083369	0.2345902329052062	4				NaN	NaN	0	NaN	11389	3999	15388
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15391	39.159	NaN	1375.4	30	0	342.53	0.035	+			25336	LPDTLKVTY	9	58	525.297541855164	1048.580530777128	2	525.2972412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LPDTLKVTY_	ENSG00000160255|ENST00000652462|ITGB2;ENST00000475170.5_1_21:46306285-46313576:-|nuORF;ENST00000498666.5_1_21:46313282-46313576:-|nuORF	68.84614121027924	0.14577793175421136	4				NaN	NaN	0	NaN	11390	3999	15388
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15406	39.189	NaN	2725.1	30	0	631.82	0.144			+	42296	TAEQVNFLF	9	55	534.7715954980862	1067.5286380629723	2	534.7723999023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAEQVNFLF_	REV__ENST00000529077.5_1_11:134231258-134237194:+|nuORF	53.351449002276354	0.2690372970092375	4				NaN	NaN	0	NaN	11402	4002	15405
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15418	39.217	NaN	6939.8	30	0	1581.7	0.214	+			39511	STFNVFVGK	9	62	499.76890521232144	997.5232574914429	2	499.7694091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STFNVFVGK_	ENSG00000122642|ENST00000242209|FKBP9;ENST00000494374.5_1_7:32997059-33028356:+|nuORF;FKBP9|p.N129Ifs*10|7|0.31|ENSG00000122642|chr7:32975192-32975192|C/-|frameshift_variant;FKBP9|p.P380Lfs*6|1|0.38|ENSG00000122642|chr7:32996258-32996258|C/-|frameshift_variant;nc|ENSG00000122642|O95302-3|FKBP9	106.68306549817024	0.032382560583716295	4				NaN	NaN	0	NaN	11411	4005	15417
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15419	39.22	NaN	3014.8	30	0	970.39	0.106	+			7843	DQPPLGGLPLA	11	66	539.3004120270108	1076.5862711208215	2	539.301513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DQPPLGGLPLA_	ENST00000265052.9_1_3:127410590-127410752:-|nuORF	44.377184641726394	0.49804979881800077	4				NaN	NaN	0	NaN	11412	4005	15417
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15420	39.222	NaN	2192.8	30	0	388.7	0.034	+			27263	MEVEAPVAN	9	48	480.2286357427794	958.4427185523588	2	480.2287292480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MEVEAPVAN_	ENSG00000103449|ENST00000251020|SALL1;ENST00000438101.1_1_X:49432665-49432995:-|nuORF;nc|ENSG00000103449|Q9NSC2-2|SALL1;SALL1|p.A362Pfs*19|1|0.3|ENSG00000103449|chr16:51141138-51141138|C/-|frameshift_variant;SALL1|p.P561Qfs*45|1|0.26|ENSG00000103449|chr16:51140540-51140540|G/-|frameshift_variant;SALL1|p.T412Nfs*26|1|0.26|ENSG00000103449|chr16:51140987-51140988|-/T|frameshift_variant;SALL1|p.V965Sfs*11|1|0.18|ENSG00000103449|chr16:51139330-51139331|-/G|frameshift_variant	68.78682469695295	0.14603441672067394	4				NaN	NaN	0	NaN	11413	4005	15417
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15431	39.247	NaN	4368.4	30	0	990.18	0.214	+			46223	VEALIHAI	8	53	433.2608649609366	864.5071769886732	2	433.2604675292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VEALIHAI_	ENSG00000173801|ENST00000393931|JUP	83.28718786952967	0.2977916691876266	4				NaN	NaN	0	NaN	11421	4008	15430
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15432	39.251	NaN	2325.2	30	0	391.2	0.106	+			3969	ATATLQVL	8	42	408.7447700196073	815.4749871060146	2	408.7449951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATATLQVL_	ENSG00000113248|ENST00000231173|PCDHB15;ENSG00000197479|ENST00000354757|PCDHB11;nc|ENSG00000197479|Q9Y5F2-2|PCDHB11	96.19043198914106	0.25873003980794995	4				NaN	NaN	0	NaN	11422	4008	15430
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15433	39.253	NaN	1390.7	30	0	198.12	0.036			+	6496	AWLVLLVLK	9	52	527.8533022401504	1053.6920515471006	2	527.8529052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AWLVLLVLK_	REV__ENST00000374866.7_1_2:189926334-189927746:-|nuORF	33.51558372728122	0.4900267029546261	4				NaN	NaN	0	NaN	11423	4008	15430
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15462	39.325	NaN	69928	30	0	17987	0.214	+			37138	SITSVFITK	9	79	498.2926256640741	994.5706983949482	2	498.29205322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SITSVFITK_	ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;TRRAP-ASNS|1|fusion;TRRAP-ASNS|2|fusion;TRRAP|p.K3443Sfs*19|1|0.28|ENSG00000196367|chr7:99004246-99004246|A/-|frameshift_variant	176.44474024533739	0.0016668318535579616	4				NaN	NaN	0	NaN	11443	4017	15461
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15463	39.329	NaN	1917.4	30	0	247.67	0.034			+	27880	MTKVSNGVL	9	53	482.75851857189406	NaN	0	482.75860595703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_M(Oxidation (M))TKVSNGVL_	REV__NCAPG|p.L316Nfs*11|1|0.05|ENSG00000109805|chr4:17817429-17817430|-/CA|frameshift_variant	60.97194046774394	0.14517358171632622	4				NaN	NaN	0	NaN	11444	4017	15461
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15477	39.358	NaN	2383	30	0	443.03	0.214			+	48226	VTAVMVLTK	9	63	489.28793300558027	976.5613130779606	2	489.28887939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_VTAVM(Oxidation (M))VLTK_	REV__MYBL1|p.N420Tfs*13|1|0.23|ENSG00000185697|chr8:66576218-66576218|T/-|frameshift_variant	87.69643885390035	0.07135982304947239	4				NaN	NaN	0	NaN	11455	4020	15476
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15478	39.361	NaN	1510.7	30	0	354.89	0.106			+	7829	DPVQAGLSSL	10	42	493.7613709944902	985.5081890557805	2	493.76177978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DPVQAGLSSL_	REV__ENSG00000118705|ENST00000237530|RPN2;REV__ENST00000456102.5_1_20:35806883-35832332:+|nuORF;REV__ENST00000462163.1_1_20:35807747-35832332:+|nuORF;REV__nc|ENSG00000118705|P04844-2|RPN2;REV__RPN2|p.G196Afs*41|1|0.12|ENSG00000118705|chr20:37204794-37204794|G/-|frameshift_variant	64.20726635412375	0.3275756395432415	4				NaN	NaN	0	NaN	11456	4020	15476
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15479	39.363	NaN	588.72	30	0	72.599	0.035	+			8147	EAAFGTTHPV	10	35	515.2540354508282	NaN	0	515.2542724609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EAAFGTTHPV_	ENST00000595618.5_2_19:17323713-17323878:+|nuORF	21.9598887501803	0.4201028297492154	4				NaN	NaN	0	NaN	11457	4020	15476
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15494	39.395	NaN	1379.5	30	0	140.51	0.214			+	25023	LLGTDNLTY	9	45	505.2642489703418	1008.5139450074836	2	505.26385498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LLGTDNLTY_	REV__ENSG00000196576|ENST00000359337|PLXNB2;REV__ENST00000479701.5_1_22:50714135-50720918:-|nuORF	53.351449002276354	0.2690372970092375	4				NaN	NaN	0	NaN	11469	4023	15493
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15495	39.398	NaN	1041.7	30	0	261.76	0.034	+			18180	ILWNVSSL	8	49	466.2680123251346	930.5214717170692	2	466.2678527832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ILWNVSSL_	APC|p.R640W|1|0.37|ENSG00000134982|chr5:112835125-112835125|C/T|missense_variant	38.80614096846853	0.6637206697844082	4				NaN	NaN	0	NaN	11470	4023	15493
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15509	39.427	NaN	1823.2	30	0	189.61	0.143	+			47460	VPVSVVSDSY	10	52	526.2691409676062	1050.5237290020123	2	526.2693481445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VPVSVVSDSY_	ENSG00000105835|ENST00000222553|NAMPT;ENST00000491027.5_1_7:105903822-105925330:-|nuORF	90.36981228632155	0.12895663264417576	4				NaN	NaN	0	NaN	11481	4026	15508
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15521	39.455	NaN	3536.4	30	0	580.57	0.142	+			23994	LEAAKALVL	9	54	464.29724731713793	926.5799417010759	2	464.2972412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LEAAKALVL_	ENSG00000166888|ENST00000300134|STAT6;ENST00000555641.1_1_12:57499966-57502061:-|nuORF;nc|ENSG00000166888|P42226-2|STAT6;nc|ENSG00000166888|P42226-3|STAT6;STAT6|p.G815Efs*27|3|0.31|ENSG00000166888|chr12:57096672-57096672|C/-|frameshift_variant	134.81075121484326	0.012914550297035062	4				NaN	NaN	0	NaN	11490	4029	15520
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15542	39.508	NaN	6026.3	30	0	1289.1	0.214	+			50390	YAAEYANAL	9	61	493.2343444824219	NaN	0	493.2343444824219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YAAEYANAL_	ENSG00000140274|ENST00000323030|DUOXA2	157.20854538584396	0.008273836010966634	4				NaN	NaN	0	NaN	11505	4035	15541
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15543	39.511	NaN	2350.3	30	0	507.45	0.034	+			46518	VEVVITHL	8	55	455.27377544160845	908.5329979500169	2	455.2739562988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VEVVITHL_	ENSG00000153048|ENST00000311052|CARHSP1	90.77665401227738	0.27511901818546464	4				NaN	NaN	0	NaN	11506	4035	15541
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15555	39.537	NaN	538	30	0	65.073	0.214	+			43079	TELVNVTHL	9	34	513.2852172851562	NaN	0	513.2852172851562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TELVNVTHL_	CDK12|p.G1271Dfs*23|2|0.26|ENSG00000167258|chr17:39530648-39530648|C/-|frameshift_variant;CDK12|p.P1267Lfs*27|1|0.33|ENSG00000167258|chr17:39530639-39530639|C/-|frameshift_variant;CDK12|p.P526Lfs*84|1|0.16|ENSG00000167258|chr17:39471406-39471406|C/-|frameshift_variant;CDK12|p.P536Hfs*74|1|0.37|ENSG00000167258|chr17:39471435-39471435|C/-|frameshift_variant;CDK12|p.P538Lfs*72|1|0.39|ENSG00000167258|chr17:39471441-39471441|C/-|frameshift_variant;CDK12|p.P683Qfs*70|1|0.34|ENSG00000167258|chr17:39490669-39490669|C/-|frameshift_variant;CDK12|p.Q937Kfs*9|1|0.2|ENSG00000167258|chr17:39515766-39515766|T/-|frameshift_variant;ENSG00000167258|ENST00000447079|CDK12;nc|ENSG00000167258|Q9NYV4-2|CDK12;nc|ENSG00000167258|Q9NYV4-3|CDK12	51.19269402634007	0.19847346126499396	4				NaN	NaN	0	NaN	11515	4038	15554
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15556	39.54	NaN	1009.1	30	0	216.99	0.034	+			25482	LPSDKALVL	9	41	478.29489488864016	954.5752368440803	2	478.294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LPSDKALVL_	DST|p.K5076Nfs*24|1|0.31|ENSG00000151914|chr6:56472218-56472218|T/-|frameshift_variant;DST|p.T4428Nfs*23|1|0.12|ENSG00000151914|chr6:56497896-56497897|-/T|frameshift_variant;ENSG00000151914|ENST00000680361|DST;nc|ENSG00000151914|Q03001-14|DST;nc|ENSG00000151914|Q03001-8|DST;nc|ENSG00000151914|Q03001|DST	49.536043120802724	0.308405419312776	4				NaN	NaN	0	NaN	11516	4038	15554
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15570	39.57	NaN	3333.9	30	0	598.76	0.142	+			36068	SEIYIHGL	8	52	466.24785486684874	930.4811568004975	2	466.247314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEIYIHGL_	ENSG00000172336|ENST00000303151|POP7	83.28718786952967	0.2977916691876266	4				NaN	NaN	0	NaN	11527	4041	15569
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15610	39.671	NaN	3358.1	30	0	769.66	0.143	+			37139	SITSVFITK	9	54	498.2926256640741	994.5706983949482	2	498.29278564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SITSVFITK_	ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;TRRAP-ASNS|1|fusion;TRRAP-ASNS|2|fusion;TRRAP|p.K3443Sfs*19|1|0.28|ENSG00000196367|chr7:99004246-99004246|A/-|frameshift_variant	90.60085204095205	0.06317133949006545	4				NaN	NaN	0	NaN	11555	4053	15609
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15635	39.73	NaN	1390.7	30	0	374.88	0.214	+			45514	TYGSGFHF	8	36	458.2037512336993	914.3929495341986	2	458.20343017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TYGSGFHF_	nc|ENSG00000284753|P0DPD7|EEF1AKMT4	42.47446043378293	0.6409579893742323	4				NaN	NaN	0	NaN	11574	4059	15634
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15636	39.733	NaN	1797.2	30	0	345.4	0.106	+			17575	IEAPIRMM	8	46	480.75371506451705	959.4928771958341	2	480.7532958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IEAPIRMM_	ENSG00000198712|ENST00000361739|MT-CO2	40.77816245573522	0.6514838689002179	4				NaN	NaN	0	NaN	11575	4059	15634
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15637	39.735	NaN	3133.5	30	0	427.2	0.035	+			45148	TVLQYVVGR	9	62	517.8032639113192	1033.5919748894382	2	517.8049926757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVLQYVVGR_	ENSG00000155561|ENST00000285968|NUP205;NUP205|p.S1260N|1|0.36|ENSG00000155561|chr7:135618419-135618419|G/A|missense_variant	106.68306549817024	0.032382560583716295	4				NaN	NaN	0	NaN	11576	4059	15634
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15650	39.762	NaN	7398.3	30	0	3328.7	0.144	+			29111	NTQDVLIFK	9	62	539.3006403500395	1076.586727766879	2	539.30126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NTQDVLIFK_	ENSG00000156958|ENST00000560031|GALK2;nc|ENSG00000156958|Q01415-2|GALK2	143.37361013837676	0.008897369944672323	4				NaN	NaN	0	NaN	11586	4062	15649
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15661	39.789	NaN	2157.6	30	0	341.2	0.143	+			44254	TSAFMPVLK	9	59	497.27536553153584	992.5361781298717	2	497.27581787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSAFMPVLK_	ENSG00000138674|ENST00000395310|SEC31A;ENST00000505479.1_1_4:83740229-83742267:-|nuORF;nc|ENSG00000138674|O94979-10|SEC31A;nc|ENSG00000138674|O94979-2|SEC31A;nc|ENSG00000138674|O94979-3|SEC31A;nc|ENSG00000138674|O94979-4|SEC31A;nc|ENSG00000138674|O94979-6|SEC31A;nc|ENSG00000138674|O94979-7|SEC31A;nc|ENSG00000138674|O94979-8|SEC31A;nc|ENSG00000138674|O94979-9|SEC31A	90.36981228632155	0.0638227155548745	4				NaN	NaN	0	NaN	11594	4065	15660
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15677	39.825	NaN	6152.5	30	0	931.08	0.142	+			42725	TDGKVFQF	8	63	471.2401113976069	940.4656698620138	2	471.23974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TDGKVFQF_	ENSG00000114391|ENST00000394077|RPL24	113.41158876095287	0.24327961457765637	4				NaN	NaN	0	NaN	11607	4068	15676
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15690	39.854	NaN	2010.2	30	0	1094.1	0.214	+			18901	IVLTFKKPL	9	28	353.57073974609375	NaN	0	353.57073974609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IVLTFKKPL_	ENSG00000174004|ENST00000328557|NRROS	42.396135135203025	0.2590952873412954	4				NaN	NaN	0	NaN	11617	4071	15689
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15691	39.857	NaN	904.38	30	0	271.72	0.035			+	20505	KFFGGRGGY	9	36	494.7529325267747	NaN	0	494.75299072265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KFFGGRGGY_	REV__ENST00000519948.3_1_12:74934905-74935118:+|nuORF	24.20275056022122	0.35506675290109213	4				NaN	NaN	0	NaN	11618	4071	15689
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15720	39.928	NaN	7871	30	0	2171.2	0.143	+			21958	KSAWRAFK	8	61	497.284331160692	992.554109388184	2	497.2840270996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSAWRAFK_	ENSG00000154856|ENST00000355285|APCDD1	45.9519527083369	0.6193794311207887	4				NaN	NaN	0	NaN	11638	4080	15719
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15732	39.955	NaN	4232	30	0	545.77	0.144	+			16051	HAVVNLINY	9	58	521.787512396449	1041.5604718596978	2	522.2896728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HAVVNLINY_	CTNNB1|p.L301Hfs*16|1|0.05|ENSG00000168036|chr3:41225827-41225831|TTCAA/-|frameshift_variant;CTNNB1|p.M271Wfs*5|1|0.08|ENSG00000168036|chr3:41225733-41225733|A/-|frameshift_variant;ENSG00000168036|ENST00000349496|CTNNB1	44.116797842482775	0.37197099687881774	4				NaN	NaN	0	NaN	11647	4083	15731
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15748	39.991	NaN	1505	30	0	559.33	0.143	+			18083	IKMHLAPGR	9	55	511.79835388493836	NaN	0	511.7980651855469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IKMHLAPGR_	ENSG00000165970|ENST00000525748|SLC6A5;nc|ENSG00000165970|Q9Y345-2|SLC6A5;nc|ENSG00000165970|Q9Y345-3|SLC6A5	21.9598887501803	0.3626577482100488	4				NaN	NaN	0	NaN	11660	4086	15747
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15772	40.047	NaN	10735	30	0	1390.1	0.143	+			35537	SAVLFTITK	9	62	490.2949126420808	978.5752723509617	2	490.2942199707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAVLFTITK_	ENSG00000177189|ENST00000379565|RPS6KA3;RPS6KA3|p.N713Rfs*13|1|0.08|ENSG00000177189|chrX:20155483-20155484|-/AGCACAAGTTC|frameshift_variant	129.42129120953632	0.01549634589885217	4				NaN	NaN	0	NaN	11678	4092	15771
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15799	40.109	NaN	1684.8	30	0	359.83	0.214	+			8385	EAMVACRQL	9	57	510.7501792985701	NaN	0	510.7501220703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EAMVACRQL_	ENSG00000115318|ENST00000264094|LOXL3;ENSG00000138131|ENST00000260702|LOXL4;nc|ENSG00000115318|P58215-2|LOXL3;nc|ENSG00000115318|P58215-3|LOXL3	66.42927471994793	0.121898005645852	4				NaN	NaN	0	NaN	11699	4098	15798
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15800	40.113	NaN	536.2	30	0	172.57	0.036			+	33204	RFCCLLIPL	9	30	539.3015747070312	NaN	0	539.3015747070312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RFCCLLIPL_	REV__ENSG00000171053|ENST00000305738|PATE1;REV__nc|ENSG00000171053|Q8WXA2-2|PATE1	13.775330524044264	0.3903584932235582	4				NaN	NaN	0	NaN	11700	4098	15798
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15813	40.14	NaN	475.99	30	0	64.528	0.141	+			36996	SIPGGYNAL	9	30	446.23245269589114	890.4503524585823	2	446.2322692871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIPGGYNAL_	ENSG00000135018|ENST00000376395|UBQLN1;ENSG00000160803|ENST00000368309|UBQLN4;ENSG00000188021|ENST00000338222|UBQLN2;ENST00000533705.5_1_9:86284090-86294929:-|nuORF;nc|ENSG00000135018|Q9UMX0-2|UBQLN1;nc|ENSG00000135018|Q9UMX0-3|UBQLN1;UBQLN2|p.N281Sfs*92|1|0.34|ENSG00000188021|chrX:56564713-56564725|GAATGCCGCACAA/-|frameshift_variant;UBQLN2|p.P525Lfs*71|10|0.37|ENSG00000188021|chrX:56565441-56565441|C/-|frameshift_variant;UBQLN4|p.A385Pfs*7|1|0.03|ENSG00000160803|chr1:156042886-156042887|GC/-|frameshift_variant;UBQLN4|p.R283H|1|0.14|ENSG00000160803|chr1:156048553-156048553|C/T|missense_variant	31.529811441608018	0.5085848003137583	4				NaN	NaN	0	NaN	11710	4101	15812
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15824	40.167	NaN	1124.1	30	0	211.97	0.14			+	26357	LTASTVIL	8	42	409.25496258264036	NaN	0	409.25494384765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LTASTVIL_	REV__ENSG00000067596|ENST00000262415|DHX8;REV__ENST00000587044.1_1_17:41568567-41594747:+|nuORF	44.53106598305862	1.7418937515398478	4				NaN	NaN	0	NaN	11718	4104	15823
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15837	40.196	NaN	3431.1	30	0	625.34	0.141	+			11764	FSKIGGIL	8	56	417.7580464765759	833.5015400199518	2	417.75787353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FSKIGGIL_	ENSG00000140575|ENST00000268182|IQGAP1;ENSG00000145703|ENST00000274364|IQGAP2;ENSG00000183856|ENST00000361170|IQGAP3;IQGAP1|p.N941Ifs*8|1|0.43|ENSG00000140575|chr15:90476693-90476693|A/-|frameshift_variant;IQGAP1|p.S1529Afs*10|1|0.15|ENSG00000140575|chr15:90492665-90492665|A/-|frameshift_variant;IQGAP2|p.K608Nfs*42|1|0.36|ENSG00000145703|chr5:76637072-76637072|A/-|frameshift_variant;IQGAP2|p.Q1499Rfs*15|1|0.05|ENSG00000145703|chr5:76701201-76701202|-/CCGAG|frameshift_variant;IQGAP2|p.T881Hfs*2|2|0.3|ENSG00000145703|chr5:76665133-76665133|A/-|frameshift_variant;IQGAP3|p.Q1205Sfs*31|1|0.4|ENSG00000183856|chr1:156534628-156534628|G/-|frameshift_variant;REV__ENSG00000134452|ENST00000362091|FBH1;REV__ENST00000475867.5_1_10:5963439-5965826:+|nuORF;REV__nc|ENSG00000134452|Q8NFZ0-2|FBH1	104.74654710444128	0.24806011021879068	4				NaN	NaN	0	NaN	11728	4107	15836
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15868	40.273	NaN	2094.1	30	0	650.65	0.142	+			18878	IVGTVLIIK	9	42	478.3309880279523	954.6474231227046	2	478.3318176269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IVGTVLIIK_	ENSG00000231389|ENST00000419277|HLA-DPA1	104.74654710444128	0.034358562718640136	4				NaN	NaN	0	NaN	11750	4116	15867
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15876	40.294	NaN	454.79	30	0	61.846	0.141			+	16642	HHQSAPAL	8	23	430.72181475354347	NaN	0	430.7229309082031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HHQSAPAL_	REV__ENST00000549307.5_1_12:58109828-58113249:+|nuORF	37.15910966729921	1.7418937515398478	4				NaN	NaN	0	NaN	11755	4119	15875
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15885	40.316	NaN	1165	30	0	285.29	0.142	+			44050	TPQGGIVVY	9	39	467.25514653515364	NaN	0	467.25567626953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TPQGGIVVY_	ENSG00000104731|ENST00000270583|KLHDC4;ENST00000562913.5_1_16:87744798-87760508:-|nuORF;ENST00000566349.5_1_16:87741959-87776602:-|nuORF;KLHDC4|p.R361Qfs*9|1|0.36|ENSG00000104731|chr16:87709632-87709633|-/C|frameshift_variant;KLHDC4|p.R412Gfs*28|1|0.34|ENSG00000104731|chr16:87709478-87709478|G/-|frameshift_variant;nc|ENSG00000104731|Q8TBB5-2|KLHDC4;nc|ENSG00000104731|Q8TBB5-3|KLHDC4	35.61828744233558	0.29773779453147337	4				NaN	NaN	0	NaN	11761	4122	15884
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15902	40.361	NaN	3268.3	30	0	356.42	0.214	+			28040	NAAKVFNLY	9	60	520.2821110295871	1038.549669125974	2	520.2823486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAAKVFNLY_	ENSG00000092964|ENST00000521913|DPYSL2;nc|ENSG00000092964|Q16555-2|DPYSL2;nc|ENSG00000092964|Q16555|DPYSL2	132.757866228626	0.013877640931359021	4				NaN	NaN	0	NaN	11772	4128	15901
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15903	40.364	NaN	1275.5	30	0	277.11	0.036	+			45394	TVTSYVFLK	9	41	529.3001647951886	1056.5857766571771	2	529.300537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVTSYVFLK_	ABCB6|p.G318Vfs*9|1|0.69|ENSG00000115657|chr2:219216381-219216381|C/-|frameshift_variant;ABCB6|p.G319Wfs*115|1|0.24|ENSG00000115657|chr2:219216380-219216381|-/C|frameshift_variant;ENSG00000115657|ENST00000265316|ABCB6;ENST00000417678.5_1_2:220079697-220081182:-|nuORF;ENST00000446716.5_1_2:220075515-220081188:-|nuORF;nc|ENSG00000115657|Q9NP58-4|ABCB6	82.24051045832904	0.08786059719216216	4				NaN	NaN	0	NaN	11773	4128	15901
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15915	40.39	NaN	5683	30	0	2732.8	0.143	+			31788	QPLKLDTSF	9	53	524.7872291467681	1047.5599053603362	2	524.7870483398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QPLKLDTSF_	ENSG00000126581|ENST00000590099|BECN1;ENST00000591307.5_1_17:40972740-40975895:-|nuORF	66.42927471994793	0.16001998865088202	4				NaN	NaN	0	NaN	11782	4131	15914
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15928	40.419	NaN	2912.1	30	0	615.6	0.142	+			35914	SEFPIRTL	8	46	481.76876269588416	961.5229724585683	2	481.76849365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEFPIRTL_	CKAP5|p.V1971Lfs*42|1|0.03|ENSG00000175216|chr11:46744211-46744212|-/TTGAAAAAAAG|frameshift_variant;ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5	45.97224482568171	0.6192535143389125	4				NaN	NaN	0	NaN	11792	4134	15927
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15936	40.44	NaN	1414.1	30	0	298.55	0.142	+			17765	IESIVHAF	8	51	458.25079345703125	NaN	0	458.25079345703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IESIVHAF_	ENSG00000162928|ENST00000295030|PEX13	100.27268790702828	1.7418937515398478	4				NaN	NaN	0	NaN	11797	4137	15935
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15958	40.493	NaN	1947.5	30	0	249.67	0.214	+			31644	QMSNITVTY	9	56	528.7547636994028	1055.4949744656055	2	528.75537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QMSNITVTY_	ENSG00000100028|ENST00000215829|SNRPD3;nc|ENSG00000286070|P62318-2|SNRPD3	47.95952297671804	0.32689736945648856	4				NaN	NaN	0	NaN	11813	4143	15957
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15959	40.497	NaN	832.91	30	0	101.69	0.033	+			36904	SIHSTFSL	8	36	446.23218830496324	890.4498236767265	2	446.23223876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SIHSTFSL_	ENST00000391959.5_2_1:202549704-202549908:+|nuORF	57.81127852772723	0.5234495074909924	4				NaN	NaN	0	NaN	11814	4143	15957
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15968	40.516	NaN	12667	30	0	3642	0.214	+			35715	SDLKVIVM	8	61	452.76195161577107	903.5093502983422	2	452.7619934082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SDLKVIVM_	ENSG00000109606|ENST00000336812|DHX15	104.74654710444128	0.24806011021879068	4				NaN	NaN	0	NaN	11820	4146	15967
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15969	40.52	NaN	2494.9	30	0	603.64	0.106	+			45878	VANPNSAIF	9	51	466.74542707742495	931.4763012216499	2	466.7456970214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VANPNSAIF_	ENSG00000106682|ENST00000265753|EIF4H;nc|ENSG00000106682|Q15056-2|EIF4H	49.44154591367651	0.3095138337212152	4				NaN	NaN	0	NaN	11821	4146	15967
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15970	40.522	NaN	667.44	30	0	103.05	0.034			+	7854	DQVEVEAAL	9	29	487.24569188734154	972.4768308414831	2	487.2452697753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DQVEVEAAL_	REV__CYC1|p.E254Rfs*3|1|0.5|ENSG00000179091|chr8:144096730-144096731|-/A|frameshift_variant;REV__ENSG00000179091|ENST00000318911|CYC1;REV__ENST00000533444.1_1_8:145150729-145152236:+|nuORF	35.61828744233558	0.47037581924408073	4				NaN	NaN	0	NaN	11822	4146	15967
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15977	40.539	NaN	1186	30	0	104.53	0.142	+			27173	MDIVVHTL	8	45	464.25200935315354	926.4894657731071	2	464.2513122558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MDIVVHTL_	ENSG00000151502|ENST00000281187|VPS26B;ENST00000527586.1_1_11:134109936-134113358:+|nuORF;VPS26B|p.E144K|1|0.33|ENSG00000151502|chr11:134240040-134240040|G/A|missense_variant	90.77665401227738	0.27511901818546464	4				NaN	NaN	0	NaN	11826	4149	15976
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16008	40.616	NaN	4015.5	30	0	971.78	0.142	+			1288	AESKVFYL	8	59	478.758022370117	955.501491807034	2	478.75762939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AESKVFYL_	ENSG00000164924|ENST00000395958|YWHAZ;ENST00000392459.3_1_6:127676988-127677414:+|nuORF;ENST00000440317.1_1_2:127315208-127315727:-|nuORF;ENST00000480304.5_1_8:101936173-101961117:-|nuORF;ENST00000517727.5_1_8:101936341-101962760:-|nuORF;nc|ENSG00000164924|P63104-2|YWHAZ	64.20726635412375	0.4601301477144759	4				NaN	NaN	0	NaN	11848	4158	16007
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16031	40.67	NaN	2257.1	30	0	340.24	0.14			+	25916	LSGPSAEAL	9	42	422.724320151434	843.434087369668	2	422.7239685058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSGPSAEAL_	REV__ENST00000517549.1_1_8:134050771-134052457:-|nuORF	63.30626980617807	0.18605348971131092	4				NaN	NaN	0	NaN	11865	4164	16030
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16061	40.755	NaN	3089.9	30	0	383.89	0.143	+			35078	SAFLCGVMK	9	62	478.2405513262444	954.4665497192888	2	478.24102783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAFLCGVMK_	ENSG00000125944|ENST00000302271|HNRNPR;ENSG00000135316|ENST00000369622|SYNCRIP;HNRNPR|p.L367Qfs*19|1|0.05|ENSG00000125944|chr1:23313620-23313621|-/TTTAATCTCT|frameshift_variant;HNRNPR|p.W594Gfs*15|1|0.23|ENSG00000125944|chr1:23310575-23310576|CA/-|frameshift_variant;nc|ENSG00000125944|O43390-2|HNRNPR;nc|ENSG00000125944|O43390-3|HNRNPR;nc|ENSG00000271793|O60506-2|SYNCRIP;nc|ENSG00000271793|O60506-3|SYNCRIP;nc|ENSG00000271793|O60506-4|SYNCRIP	64.20726635412375	0.17854274437659667	4				NaN	NaN	0	NaN	11883	4176	16060
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16091	40.921	NaN	705.81	30	0	86.309	0.143			+	44320	TSFIGGGFIV	10	44	499.2722473144531	NaN	0	499.2722473144531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSFIGGGFIV_	REV__tr|U7T6J7|U7T6J7_FUSNUAGCSfamilyalanineorglycine:cationsymporterOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00264PE=3SV=1	37.15910966729921	0.3781637092648983	4				NaN	NaN	0	NaN	11904	4185	16090
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16102	40.948	NaN	14164	30	0	2304.8	0.214	+			8470	EASKLLLTY	9	69	519.2976187243662	1036.5806845155323	2	519.2977294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EASKLLLTY_	ENSG00000151092|ENST00000280700|NGLY1;ENST00000463611.1_1_3:25824608-25824881:-|nuORF;ENST00000474611.1_1_3:25819310-25824959:-|nuORF;ENST00000478991.1_1_3:25819998-25824881:-|nuORF;ENST00000493324.5_1_3:25778798-25824881:-|nuORF;nc|ENSG00000151092|Q96IV0-2|NGLY1;nc|ENSG00000151092|Q96IV0-3|NGLY1;NGLY1|p.I101Nfs*3|1|0.22|ENSG00000151092|chr3:25764256-25764257|-/T|frameshift_variant	205.58201149802446	9.704336011985736E-06	4				NaN	NaN	0	NaN	11912	4188	16101
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16103	40.952	NaN	1008.5	30	0	245.03	0.106	+			26663	LVFAIAAAAY	10	37	505.2891769527869	NaN	0	505.28912353515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LVFAIAAAAY_	ENSG00000105726|ENST00000357324|ATP13A1;ENST00000473243.5_1_19:19766211-19767540:-|nuORF;ENST00000496082.5_1_19:19764878-19766379:-|nuORF;nc|ENSG00000105726|Q9HD20-2|ATP13A1	35.200714571348534	0.3845941098745963	4				NaN	NaN	0	NaN	11913	4188	16101
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16104	40.953	NaN	1537.1	30	0	367.76	0.034	+			42444	TALSSFLTK	9	51	484.27667496374016	NaN	0	484.2768249511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TALSSFLTK_	ENSG00000132382|ENST00000254718|MYBBP1A;ENST00000574547.5_1_17:4442712-4447986:-|nuORF;nc|ENSG00000132382|Q9BQG0-2|MYBBP1A	54.776311868738084	0.17377682019723872	4				NaN	NaN	0	NaN	11914	4188	16101
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16164	41.107	NaN	1315.5	30	0	128.97	0.143	+			5283	ATVIFIVTK	9	52	496.31330781338534	990.6120626935707	2	496.3131103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATVIFIVTK_	ENSG00000171234|ENST00000305231|UGT2B7	95.81516180277367	0.04847050768394289	4				NaN	NaN	0	NaN	11956	4206	16163
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16186	41.16	NaN	553.45	30	0	71.375	0.214			+	23693	LATDGPVVY	9	30	467.7475970870178	NaN	0	467.74774169921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LATDGPVVY_	REV__ENST00000489116.1_1_6:28415047-28415581:+|nuORF	33.51558372728122	0.30835390848773375	4				NaN	NaN	0	NaN	11972	4212	16185
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16187	41.163	NaN	1126.6	30	0	341.53	0.106	+			29409	PATVPSVPI	9	30	440.7612095856835	879.507866238167	2	440.7608642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PATVPSVPI_	EEF1A2|p.F190S|1|0.12|ENSG00000101210|chr20:63494857-63494857|A/G|missense_variant	37.15910966729921	0.4535818937225704	4				NaN	NaN	0	NaN	11973	4212	16185
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16188	41.165	NaN	1921.7	30	0	520.11	0.035	+			25517	LPSSTRITY	9	58	519.2876072186647	NaN	0	519.2877807617188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LPSSTRITY_	CIC|p.E1288Gfs*56|1|0.3|ENSG00000079432|chr19:42293654-42293655|-/G|frameshift_variant;CIC|p.P1248Hfs*54|3|0.34|ENSG00000079432|chr19:42293224-42293224|C/-|frameshift_variant;CIC|p.T1217Nfs*6|1|0.23|ENSG00000079432|chr19:42293133-42293134|-/A|frameshift_variant;ENSG00000079432|ENST00000681038|CIC;nc|ENSG00000079432|Q96RK0-2|CIC	85.16082228582465	0.053699699744190164	4				NaN	NaN	0	NaN	11974	4212	16185
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16202	41.195	NaN	1337.8	30	0	243.35	0.214			+	51509	YVQSGPVQL	9	45	495.7666262096393	989.5186994860786	2	495.76727294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YVQSGPVQL_	REV__ENSG00000204634|ENST00000409318|TBC1D8;REV__nc|ENSG00000204634|O95759|TBC1D8	29.170058357718403	0.5306379469863586	4				NaN	NaN	0	NaN	11985	4215	16201
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16203	41.199	NaN	634.7	30	0	173.71	0.035	+			47082	VLIPPHARI	9	32	508.3240051269531	NaN	0	508.3240051269531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VLIPPHARI_	GSK3B|p.I376V|1|0.21|ENSG00000082701|chr3:119843324-119843324|T/C|missense_variant	35.200714571348534	0.2998460331538257	4				NaN	NaN	0	NaN	11986	4215	16201
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16212	41.219	NaN	2490.5	30	0	625.14	0.143	+			28811	NPITVQTVY	9	42	517.7798842411441	1033.5452155490882	2	517.78076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NPITVQTVY_	ENSG00000189067|ENST00000622633|LITAF;nc|ENSG00000189067|Q99732-2|LITAF;nc|ENSG00000189067|Q99732-3|LITAF	51.19269402634007	0.2889735674168909	4				NaN	NaN	0	NaN	11992	4218	16211
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16225	41.258	NaN	1893.6	30	0	744.3	0.214	+			18662	ISVMCTLIK	9	43	532.7963219730341	1063.578091012868	2	532.7974853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_ISVMC(Carbamidomethyl (C))TLIK_	ENST00000525506.1_1_1:33116898-33123241:+|nuORF	56.72105179125745	0.24094814563026265	4				NaN	NaN	0	NaN	11999	4224	16224
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16226	41.262	NaN	1509.2	30	0	107.22	0.036	+			44028	TPMFVVKAY	9	51	528.2842818098349	1054.5540106864696	2	528.2847900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TPMFVVKAY_	ENSG00000167658|ENST00000309311|EEF2	87.69643885390035	0.07135982304947239	4				NaN	NaN	0	NaN	12000	4224	16224
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16233	41.278	NaN	1740.2	30	0	677.57	0.143	+			2305	AMGDVVIFK	9	53	490.2679455055537	978.5213380779074	2	490.26812744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AMGDVVIFK_	ENSG00000163946|ENST00000683822|TASOR;nc|ENSG00000163946|Q9UK61-3|TASOR;nc|ENSG00000163946|Q9UK61-4|TASOR	90.36981228632155	0.0638227155548745	4				NaN	NaN	0	NaN	12004	4227	16232
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16262	41.361	NaN	1642.8	30	0	259.29	0.214			+	13108	GGFLSYAI	8	36	414.218820503378	826.4230880735561	2	414.2189636230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GGFLSYAI_	REV__ENSG00000144290|ENST00000446997|SLC4A10;REV__ENST00000446228.5_1_2:162758621-162834241:+|nuORF;REV__nc|ENSG00000144290|Q6U841-2|SLC4A10;REV__nc|ENSG00000144290|Q6U841-3|SLC4A10	46.76643321282427	0.6143254112625767	4				NaN	NaN	0	NaN	12021	4239	16261
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16263	41.365	NaN	900.17	30	0	193.68	0.036			+	-1	QELMSMPGY	9	41	536.2286271241799	NaN	0	536.22802734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_QELM(Oxidation (M))SMPGY_	REV__ENSG00000118217|ENST00000367942|ATF6	35.61828744233558	0.29773779453147337	4				NaN	NaN	0	NaN	12022	4239	16261
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16281	41.41	NaN	2164.7	30	0	589.32	0.141			+	37991	SPKDIGAPI	9	37	449.25582277800925	896.4970926228185	2	449.2557373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SPKDIGAPI_	REV__ENST00000369724.4_1_6:83904036-83904183:+|nuORF	45.9519527083369	0.35044536499095585	4				NaN	NaN	0	NaN	12034	4245	16280
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16332	41.536	NaN	540.62	30	0	135.55	0.143			+	11591	FPRGRRPL	8	28	499.80346730297174	NaN	0	499.80328369140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FPRGRRPL_	REV__ENST00000293826.4_1_17:7464569-7464860:+|nuORF	26.79610172149135	1.7418937515398478	4				NaN	NaN	0	NaN	12070	4260	16331
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16399	41.709	NaN	2454	30	0	757.21	0.142	+			11606	FPSSVTNTL	9	42	483.25082489962244	964.4870968660449	2	483.2503356933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FPSSVTNTL_	ENSG00000145113|ENST00000463781|MUC4;MUC4|p.L3985Ffs*274|1|0.3|ENSG00000145113|chr3:195779627-195779627|G/-|frameshift_variant;MUC4|p.N4902Tfs*8|1|0.37|ENSG00000145113|chr3:195761027-195761027|T/-|frameshift_variant;nc|ENSG00000145113|Q99102-10|MUC4;nc|ENSG00000145113|Q99102-11|MUC4;nc|ENSG00000145113|Q99102-15|MUC4;nc|ENSG00000145113|Q99102-16|MUC4;nc|ENSG00000145113|Q99102-17|MUC4;nc|ENSG00000145113|Q99102-2|MUC4;nc|ENSG00000145113|Q99102-3|MUC4;nc|ENSG00000145113|Q99102-5|MUC4;nc|ENSG00000145113|Q99102-7|MUC4;nc|ENSG00000145113|Q99102-8|MUC4;nc|ENSG00000145113|Q99102-9|MUC4	58.22992032128504	0.22837015374068087	4				NaN	NaN	0	NaN	12116	4281	16398
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16437	41.821	NaN	1095.9	30	0	195.63	0.144			+	-1	LGFSADLDTM	10	48	543.2450940358644	NaN	0	543.2449340820312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LGFSADLDTM(Oxidation (M))_	REV__ENSG00000091732|ENST00000358303|ZC3HC1;REV__nc|ENSG00000091732|Q86WB0-2|ZC3HC1;REV__nc|ENSG00000091732|Q86WB0-3|ZC3HC1	44.116797842482775	0.3427969396372342	4				NaN	NaN	0	NaN	12139	4296	16436
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16449	41.849	NaN	3922.8	30	0	802	0.214	+			27520	MPAAQEGAVAF	11	47	546.263615639473	1090.5126783457458	2	546.2649536132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MPAAQEGAVAF_	ENSG00000231925|ENST00000434618|TAPBP;ENST00000480730.5_1_6:33272736-33281818:-|nuORF;nc|ENSG00000231925|O15533-2|TAPBP;nc|ENSG00000231925|O15533-3|TAPBP;nc|ENSG00000231925|O15533-4|TAPBP	63.53385203322761	0.2919106290768168	4				NaN	NaN	0	NaN	12148	4299	16448
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16450	41.852	NaN	857.8	30	0	131.65	0.034				-1	IESKVQPM	8	53	474.2454549660771	NaN	0	474.2458190917969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_IESKVQPM(Oxidation (M))_	ENSG00000186862|ENST00000619208|PDZD7	65.80317337860623	1.7418937515398478	4				NaN	NaN	0	NaN	12149	4299	16448
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16515	42.03	NaN	3354.9	30	0	1410.9	0.144	+			32402	QVEEIFNLK	9	45	560.3065501958837	1118.5985474585673	2	560.307373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QVEEIFNLK_	ENSG00000263001|ENST00000573035|GTF2I;ENST00000544802.5_1_7:72593260-72619478:+|nuORF;nc|ENSG00000263001|P78347-2|GTF2I;nc|ENSG00000263001|P78347-3|GTF2I;nc|ENSG00000263001|P78347-4|GTF2I	45.02220120713402	0.3613509778819777	4				NaN	NaN	0	NaN	12190	4323	16514
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16531	42.073	NaN	611.64	30	0	140.78	0.142	+			25411	LPLARLAAV	9	32	462.3056945800781	NaN	0	462.3056945800781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LPLARLAAV_	ENSG00000198788|ENST00000675028|MUC2;nc|ENSG00000198788|Q02817|MUC2	24.20275056022122	0.35506675290109213	4				NaN	NaN	0	NaN	12200	4329	16530
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16593	42.259	NaN	2913.8	30	0	577.5	0.143	+			18450	ISEALNTVY	9	55	505.2638611376143	1008.5131693420286	2	505.26422119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ISEALNTVY_	ABCA13|p.A4442Pfs*3|1|0.06|ENSG00000179869|chr7:48506365-48506365|G/-|frameshift_variant;ABCA13|p.E1535Lfs*6|1|0.06|ENSG00000179869|chr7:48274267-48274268|-/TTTAGGTTTCTTCTCT|frameshift_variant;ABCA13|p.H2188Ifs*3|1|0.11|ENSG00000179869|chr7:48276226-48276226|C/-|frameshift_variant;ABCA13|p.K1949Rfs*10|1|0.04|ENSG00000179869|chr7:48275509-48275510|-/TCGGG|frameshift_variant;ABCA13|p.K3855Nfs*139|1|0.3|ENSG00000179869|chr7:48389131-48389153|GGCTGTGGTCCAAGACCTCAGCC/-|frameshift_variant;ABCA13|p.L1248Tfs*2|1|0.16|ENSG00000179869|chr7:48273400-48273401|-/A|frameshift_variant;ABCA13|p.N1764Tfs*18|1|0.33|ENSG00000179869|chr7:48274953-48274953|A/-|frameshift_variant;ABCA13|p.P1447Tfs*22|1|0.49|ENSG00000179869|chr7:48273997-48273998|-/A|frameshift_variant;ABCA13|p.S1533Lfs*16|1|0.1|ENSG00000179869|chr7:48274262-48274263|-/CT|frameshift_variant;ENSG00000179869|ENST00000435803|ABCA13;nc|ENSG00000179869|Q86UQ4-4|ABCA13;nc|ENSG00000179869|Q86UQ4|ABCA13	84.9155231211612	0.07920012719736333	4				NaN	NaN	0	NaN	12235	4356	16592
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16642	42.4	NaN	3460.9	30	0	1028.6	0.142	+			37703	SLSPVILIK	9	44	485.32077219188193	968.6269914505639	2	485.3206481933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLSPVILIK_	ENSG00000112297|ENST00000633556|CRYBG1;nc|ENSG00000112297|Q9Y4K1-1|CRYBG1	58.78195531508484	0.22376836668196862	4				NaN	NaN	0	NaN	12263	4377	16641
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16663	42.459	NaN	4577.6	30	0	609.45	0.143	+			41104	SVINVFVGR	9	64	495.79002114806997	989.56548936294	2	495.7912902832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVINVFVGR_	ENSG00000135540|ENST00000343505|NHSL1;nc|ENSG00000135540|Q5SYE7|NHSL1;NHSL1|p.E1312Gfs*27|1|0.12|ENSG00000135540|chr6:138430422-138430423|-/C|frameshift_variant;NHSL1|p.I1199Ffs*26|1|0.44|ENSG00000135540|chr6:138430763-138430763|G/-|frameshift_variant;NHSL1|p.P932Rfs*70|1|0.13|ENSG00000135540|chr6:138431562-138431562|G/-|frameshift_variant	126.24258497203832	0.01742065577488747	4				NaN	NaN	0	NaN	12275	4386	16662
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16671	42.48	NaN	5503.3	30	0	2861.1	0.144	+			30596	QAQEVFFLK	9	68	555.3032987909788	1108.5920446487576	2	555.3055419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QAQEVFFLK_	ENSG00000170248|ENST00000307296|PDCD6IP;ENST00000459659.1_1_3:33863478-33868168:+|nuORF;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP;nc|ENSG00000170248|Q8WUM4-3|PDCD6IP;PDCD6IP|p.F351Nfs*37|1|0.08|ENSG00000170248|chr3:33836259-33836260|-/AATCC|frameshift_variant	79.71258880314673	0.09879134589249085	4				NaN	NaN	0	NaN	12280	4389	16670
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16679	42.499	NaN	2817.4	30	0	1281.2	0.214	+			30463	QADFSVLHY	9	48	540.2612150597039	1078.5078771862077	2	540.2625732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QADFSVLHY_	ENSG00000105357|ENST00000642316|MYH14;MYH14|p.L1950Sfs*14|1|0.34|ENSG00000105357|chr19:50309646-50309646|C/-|frameshift_variant;MYH14|p.M997*|1|0.19|ENSG00000105357|chr19:50271483-50271483|A/-|frameshift_variant;MYH14|p.R929Gfs*44|1|0.38|ENSG00000105357|chr19:50268237-50268237|G/-|frameshift_variant;nc|ENSG00000105357|Q7Z406-4|MYH14;nc|ENSG00000105357|Q7Z406-5|MYH14;nc|ENSG00000105357|Q7Z406-6|MYH14;nc|ENSG00000105357|Q7Z406|MYH14	47.91560031466742	0.327412564698279	4				NaN	NaN	0	NaN	12285	4392	16678
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16680	42.503	NaN	2274.7	30	0	695.93	0.035	+			18288	IPNEIIHAL	9	53	510.2977852045119	1018.5810174758238	2	510.7995300292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IPNEIIHAL_	ENSG00000099783|ENST00000325495|HNRNPM;HNRNPM|p.M346Wfs*22|1|0.25|ENSG00000099783|chr19:8473699-8473699|A/-|frameshift_variant	72.87924865735499	0.12833875048249987	4				NaN	NaN	0	NaN	12286	4392	16678
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16686	42.518	NaN	965.51	30	0	74.287	0.214	+			37996	SPLAARLLY	9	49	502.29998595314964	NaN	0	502.29986572265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SPLAARLLY_	ENSG00000100300|ENST00000337554|TSPO	32.81241826257853	0.3119040447479903	4				NaN	NaN	0	NaN	12289	4395	16685
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16687	42.522	NaN	1135.1	30	0	292.14	0.033	+			49999	WAPESAPL	8	31	435.7213439941406	NaN	0	435.7213439941406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WAPESAPL_	ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;nc|ENSG00000165410|Q9Y281-3|CFL2	71.37791200682192	1.7418937515398478	4				NaN	NaN	0	NaN	12290	4395	16685
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16748	42.697	NaN	1254.4	30	0	157.75	0.143	+			27614	MPNVKVAVF	9	52	502.7841732204882	1003.5537935077764	2	502.7845458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MPNVKVAVF_	DDX39B|p.F149Lfs*13|4|0.27|ENSG00000198563|chr6:31536669-31536669|A/-|frameshift_variant;ENSG00000198563|ENST00000396172|DDX39B;ENST00000481456.1_1_6:31503008-31508408:-|nuORF;nc|ENSG00000198563|Q13838-2|DDX39B	58.22992032128504	0.22837015374068087	4				NaN	NaN	0	NaN	12324	4422	16747
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16761	42.735	NaN	4221.5	30	0	650.68	0.143	+			28776	NPEIEKKY	8	58	510.77211316584345	1019.5296733984869	2	510.77191162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NPEIEKKY_	ENSG00000100483|ENST00000395860|VCPKMT;nc|ENSG00000100483|Q9H867-2|VCPKMT;nc|ENSG00000100483|Q9H867-5|VCPKMT;VCPKMT|p.K180E|1|0.05|ENSG00000100483|chr14:50114317-50114317|T/C|missense_variant	118.74307786436346	0.2363524257139583	4				NaN	NaN	0	NaN	12331	4428	16760
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16806	42.852	NaN	1259.1	30	0	271.7	0.143			+	25572	LQEIQLTY	8	38	504.2745361328125	NaN	0	504.2745361328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LQEIQLTY_	REV__ENST00000396959.2_1_3:12829056-12829584:-|nuORF	42.396135135203025	1.7418937515398478	4				NaN	NaN	0	NaN	12361	4443	16805
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16871	43.06	NaN	2981.6	30	0	460.5	0.142	+			11637	FQGASNLTL	9	49	475.75091828666194	949.4872836401239	2	476.25189208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FQGASNLTL_	DDX18|p.K110Efs*11|1|0.42|ENSG00000088205|chr2:117817678-117817679|-/A|frameshift_variant;ENSG00000088205|ENST00000263239|DDX18	63.53385203322761	0.18415635464017938	4				NaN	NaN	0	NaN	12393	4476	16870
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16903	43.147	NaN	2820.2	30	0	542.34	0.143	+			25392	LPIEAPIRM	9	58	520.3025536863063	1038.5905544394125	2	520.3031616210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LPIEAPIRM_	ENSG00000198712|ENST00000361739|MT-CO2	64.20726635412375	0.17854274437659667	4				NaN	NaN	0	NaN	12413	4488	16902
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16930	43.229	NaN	1918.9	30	0	389.73	0.144	+			42457	TAMDVVYALK	10	54	555.7980413670555	1109.5815298009109	2	555.7982788085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAMDVVYALK_	ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2	54.722347961057174	0.4138398245444204	4				NaN	NaN	0	NaN	12428	4500	16929
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16936	43.245	NaN	516.49	30	0	90.155	0.143				-1	EGRMCLGTL	9	29	498.23768633833794	994.4608197434759	2	498.2380065917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_EGRM(Oxidation (M))CLGTL_	ENST00000460833.1_1_3:64670856-64785255:+|nuORF;ENST00000485174.5_1_3:64670856-64727150:+|nuORF	39.252832667884924	0.4290233611298554	4				NaN	NaN	0	NaN	12431	4503	16935
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16961	43.344	NaN	1623	30	0	235.97	0.143	+			50824	YESKVFYL	8	55	524.7716331667217	1047.5287134002433	2	524.77197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YESKVFYL_	ENSG00000128245|ENST00000248975|YWHAH;ENSG00000170027|ENST00000307630|YWHAG;ENST00000397492.1_1_22:32346295-32352776:+|nuORF	58.78195531508484	0.5138399468736706	4				NaN	NaN	0	NaN	12438	4521	16960
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16975	43.396	NaN	2306.8	30	0	484.87	0.143			+	50826	YESVGKLIL	9	53	511.3008280502171	1020.5871031672342	2	511.80242919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YESVGKLIL_	REV__CMYA5|p.I3735Hfs*2|1|0.08|ENSG00000164309|chr5:79758842-79758843|-/T|frameshift_variant;REV__CMYA5|p.K1823Rfs*17|2|0.34|ENSG00000164309|chr5:79734227-79734227|A/-|frameshift_variant;REV__CMYA5|p.M1226Wfs*13|1|0.22|ENSG00000164309|chr5:79732436-79732436|A/-|frameshift_variant;REV__CMYA5|p.N2399Ifs*16|1|0.46|ENSG00000164309|chr5:79735957-79735957|A/-|frameshift_variant;REV__CMYA5|p.P4051Nfs*8|1|0.05|ENSG00000164309|chr5:79799555-79799561|AACCTGG/-|frameshift_variant;REV__CMYA5|p.S3683Pfs*17|1|0.14|ENSG00000164309|chr5:79752728-79752728|T/-|frameshift_variant;REV__ENSG00000164309|ENST00000446378|CMYA5	44.116797842482775	0.37197099687881774	4				NaN	NaN	0	NaN	12443	4530	16974
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17010	43.498	NaN	2060.2	30	0	304.12	0.14	+			7339	DAVVSQVL	8	48	415.7349480568989	829.4553431805978	2	415.7347412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DAVVSQVL_	ENSG00000130724|ENST00000312547|CHMP2A	82.24051045832904	0.30490469762271794	4				NaN	NaN	0	NaN	12463	4545	17009
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17058	43.651	NaN	2343.7	30	0	886.17	0.145	+			32589	QYESKVFYL	9	52	588.8006413897198	1175.5867298462395	2	588.8015747070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QYESKVFYL_	ENSG00000128245|ENST00000248975|YWHAH;ENSG00000170027|ENST00000307630|YWHAG;ENST00000397492.1_1_22:32346295-32352776:+|nuORF	64.20726635412375	0.17854274437659667	4				NaN	NaN	0	NaN	12487	4569	17057
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17064	43.668	NaN	5733	30	0	2917.1	0.145	+			32590	QYESKVFYL	9	58	588.8006413897198	1175.5867298462395	2	589.3023681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QYESKVFYL_	ENSG00000128245|ENST00000248975|YWHAH;ENSG00000170027|ENST00000307630|YWHAG;ENST00000397492.1_1_22:32346295-32352776:+|nuORF	122.1759843771914	0.019882474861609503	4				NaN	NaN	0	NaN	12490	4572	17063
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17075	43.703	NaN	1998.2	30	0	987.65	0.144			+	-1	LILPCPPDK	9	46	526.7929924166538	1051.5714319001074	2	526.793212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_LILPC(Carbamidomethyl (C))PPDK_	REV__SSH2|p.M625Cfs*32|1|0.2|ENSG00000141298|chr17:29636277-29636277|G/-|frameshift_variant	37.15910966729921	0.4535818937225704	4				NaN	NaN	0	NaN	12495	4578	17074
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17126	43.869	NaN	4957.9	30	0	493.01	0.214	+			43139	TESGLNVTL	9	51	467.2482003702968	NaN	0	467.2483215332031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TESGLNVTL_	ENSG00000169564|ENST00000303577|PCBP1	115.49404669440601	0.004735551190337385	4				NaN	NaN	0	NaN	12519	4605	17125
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17127	43.873	NaN	699.25	30	0	95.857	0.034	+			46687	VGIDIFTGK	9	39	475.27161868686596	NaN	0	475.2715148925781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VGIDIFTGK_	EIF5AL1|p.K68T|1|0.33|ENSG00000253626|chr10:79512852-79512852|A/C|missense_variant;EIF5AL1|p.L114Sfs*3|1|0.07|ENSG00000253626|chr10:79512986-79512987|-/G|frameshift_variant;ENSG00000132507|ENST00000336458|EIF5A;ENSG00000163577|ENST00000295822|EIF5A2;ENSG00000253626|ENST00000520547|EIF5AL1;nc|ENSG00000132507|P63241-2|EIF5A	65.46538089061403	0.1260090208616529	4				NaN	NaN	0	NaN	12520	4605	17125
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17199	44.08	NaN	1428.1	30	0	587.02	0.144	+			30822	QEELVKISL	9	39	529.8087731270086	1057.6029933208172	2	529.8096923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QEELVKISL_	COL6A3|p.A2956Lfs*45|1|0.33|ENSG00000163359|chr2:237336234-237336234|C/-|frameshift_variant;COL6A3|p.A2957Lfs*44|1|0.33|ENSG00000163359|chr2:237336232-237336232|A/-|frameshift_variant;COL6A3|p.G1770Vfs*12|1|0.05|ENSG00000163359|chr2:237366878-237366879|-/TGGTGTAA|frameshift_variant;COL6A3|p.G2207Efs*35|1|0.22|ENSG00000163359|chr2:237354908-237354908|G/-|frameshift_variant;COL6A3|p.G3016Vfs*19|1|0.34|ENSG00000163359|chr2:237334810-237334810|G/-|frameshift_variant;COL6A3|p.P2319Qfs*12|1|0.06|ENSG00000163359|chr2:237348359-237348359|G/-|frameshift_variant;COL6A3|p.V1771Sfs*8|3|0.08|ENSG00000163359|chr2:237366876-237366876|C/-|frameshift_variant;ENSG00000163359|ENST00000295550|COL6A3;nc|ENSG00000163359|P12111-2|COL6A3;nc|ENSG00000163359|P12111-3|COL6A3;nc|ENSG00000163359|P12111-4|COL6A3;nc|ENSG00000163359|P12111-5|COL6A3	45.908116695636124	0.35095954387056183	4				NaN	NaN	0	NaN	12562	4635	17198
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17447	44.957	NaN	1308.2	30	0	150.96	0.144	+			43929	TPALVNAAVTY	11	32	560.3067959108947	NaN	0	560.3076171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TPALVNAAVTY_	ENSG00000167283|ENST00000300688|ATP5MG;ENSG00000249222|ENST00000505920|ATP5MGL;ENST00000533172.5_1_11:118272380-118279724:+|nuORF;ENST00000534385.1_1_11:118272380-118277824:+|nuORF	48.18798116849167	0.3283333270526623	4				NaN	NaN	0	NaN	12663	4782	17446
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17475	45.049	NaN	1079	30	0	193.22	0.142			+	35758	SDVLLKLM	8	43	459.7701635121105	917.525774091021	2	459.770263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SDVLLKLM_	REV__tr|U7SV52|U7SV52_FUSNUGlucose-1-phosphateadenylyltransferase,GlgDsubunitOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01132PE=3SV=1	45.9519527083369	0.6193794311207887	4				NaN	NaN	0	NaN	12676	4797	17474
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17665	45.729	NaN	1864.4	30	0	257.53	0.142	+			42500	TANSITVTF	9	43	477.2506161130996	952.4866792929993	2	477.25042724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TANSITVTF_	ENSG00000100307|ENST00000216133|CBX7;ENST00000490741.1_1_22:39529898-39530769:-|nuORF	104.74654710444128	0.034358562718640136	4				NaN	NaN	0	NaN	12749	4914	17664
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17681	45.781	NaN	2027.4	30	0	541.79	0.14	+			19236	KAAPGQGR	8	36	392.72519438193274	783.4358358306655	2	392.72509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAAPGQGR_	ENST00000518025.5_1_5:141017849-141019494:+|nuORF	12.959181472943097	0.7887000251064199	4				NaN	NaN	0	NaN	12756	4923	17680
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17694	45.831	NaN	2375.8	30	0	516.92	0.143	+			41303	SVLNLVIVK	9	45	492.8267093526089	983.6388657720178	2	492.82659912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVLNLVIVK_	ENSG00000137154|ENST00000380394|RPS6;ENST00000464444.1_1_19:13005132-13005321:+|nuORF	117.81106730687013	0.02252488733980868	4				NaN	NaN	0	NaN	12760	4932	17693
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17758	46.072	NaN	447.76	30	0	45.882	0.142	+			15860	GYGGGFGNF	9	32	438.1876525878906	NaN	0	438.1876525878906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GYGGGFGNF_	ENSG00000115271|ENST00000437150|GCA;ENST00000479199.1_1_2:163200728-163213435:+|nuORF;ENST00000481161.5_1_2:163200677-163213018:+|nuORF;ENST00000487445.6_1_2:163200677-163215720:+|nuORF	68.484700416344	0.11313159791952428	4				NaN	NaN	0	NaN	12782	4974	17757
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17799	46.257	NaN	1222.1	30	0	291.17	0.143			+	51129	YNILDQIL	8	36	496.27672228278846	990.5388916323769	2	496.2763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YNILDQIL_	REV__ENSG00000140650|ENST00000268261|PMM2;REV__ENST00000562448.1_1_16:8895761-8900277:+|nuORF;REV__ENST00000564030.5_1_16:8891706-8900277:+|nuORF;REV__nc|ENSG00000140650|O15305-2|PMM2	44.377184641726394	0.6291511924298419	4				NaN	NaN	0	NaN	12790	5007	17798
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18104	47.379	NaN	589.68	30	0	83.109	0.141	+			42479	TANALALAM	9	38	438.23614501953125	NaN	0	438.23614501953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TANALALAM_	ENSG00000142507|ENST00000270586|PSMB6;ENST00000575643.1_1_17:4701246-4701714:+|nuORF	56.72105179125745	0.16330365735109603	4				NaN	NaN	0	NaN	12903	5199	18103
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18235	47.966	NaN	3181.9	30	0	646.88	0.14	+			43569	TIASIILS	8	42	409.25525768207814	816.4959624309563	2	409.2548522949219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TIASIILS_	tr|U7SV29|U7SV29_FUSNUEamAdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01107PE=4SV=1	85.35947970620816	0.2915182781752196	4				NaN	NaN	0	NaN	12929	5304	18234
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18666	49.648	NaN	1735.9	30	0	610.87	0.143	+			18012	IIGTIFIIK	9	40	509.3399489970637	NaN	0	509.3404235839844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IIGTIFIIK_	ENSG00000204287|ENST00000395388|HLA-DRA	79.45101966838831	0.07326487554222888	4				NaN	NaN	0	NaN	13075	5589	18665
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	1967	10.324	NaN	1290.6	30	0	245.15	0.145	+			20099	KEKKEEEKM	9	43	597.8066441211469	NaN	0	597.806396484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_KEKKEEEKM(Oxidation (M))_	ENSG00000173692|ENST00000308696|PSMD1;nc|ENSG00000173692|Q99460-2|PSMD1	101.45984612302182	0.018494728971010316	4				NaN	NaN	0	NaN	4	1961	1966
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	1986	10.419	NaN	241.67	30	0	55.226	0.154				-1	 	0	13	785.5761108398438	NaN	0	785.5761108398438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5	1979	1985
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	1995	10.452	NaN	14881	30	0	4563.3	0.143				-1	KSSDRHGMV	9	61	516.7479295598336	1031.481306186467	2	516.7486572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_KSSDRHGM(Oxidation (M))V_	ENST00000560723.5_1_15:81605599-81615081:-|nuORF	68.78682469695295	0.14603441672067394	4				NaN	NaN	0	NaN	8	1985	1994
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2001	10.471	NaN	742.25	30	0	93.526	0.211				-1	 	0	35	813.2813110351562	NaN	0	813.2813110351562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11	1988	2000
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2002	10.474	NaN	1370.1	30	0	276.29	0.106			+	22808	KVFKDLCVL	9	39	532.8112146591885	NaN	0	532.8114013671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVFKDLCVL_	REV__ENSG00000012983|ENST00000682126|MAP4K5;REV__ENST00000554990.5_1_14:50886739-50915587:-|nuORF;REV__MAP4K5|p.T738A|1|0.11|ENSG00000012983|chr14:50429213-50429213|T/C|missense_variant	47.657333605630114	0.2228375344433429	4				NaN	NaN	0	NaN	12	1988	2000
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2003	10.476	NaN	4732.2	30	0	261.11	0.049				-1	 	0	102	834.2556680174968	NaN	0	834.2525024414062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13	1988	2000
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2007	10.491	NaN	4830.7	30	0	520.37	0.211				-1	 	0	65	817.615887066437	2449.825831799511	3	817.9520263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	14	1991	2006
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2008	10.495	NaN	1924.8	30	0	191.08	0.106				-1	 	0	63	839.2572631835938	NaN	0	839.2572631835938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	15	1991	2006
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2009	10.497	NaN	355.62	30	0	68.224	0.106				-1	 	0	22	825.2775268554688	NaN	0	825.2775268554688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	16	1991	2006
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2010	10.498	NaN	113.68	30	0	20.793	0.106				-1	 	0	9	830.2670288085938	NaN	0	830.2670288085938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	17	1991	2006
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2011	10.5	NaN	644.83	30	0	327.86	0.106	+			22559	KTSKSAVKK	9	23	488.8110046386719	NaN	0	488.8110046386719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KTSKSAVKK_	ENSG00000166197|ENST00000605788|NOLC1;nc|ENSG00000166197|Q14978-2|NOLC1;nc|ENSG00000166197|Q14978-3|NOLC1	37.50817390946774	0.28819615062043347	4				NaN	NaN	0	NaN	18	1991	2006
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2012	10.502	NaN	74.233	30	0	22.081	0.049				-1	 	0	5	843.2428588867188	NaN	0	843.2428588867188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	19	1991	2006
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2017	10.517	NaN	3213.1	30	0	647.85	0.145	+			32075	QSAVKSLKRPL	11	65	613.883544921875	NaN	0	613.883544921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QSAVKSLKRPL_	nc|ENSG00000152601|Q9NR56|MBNL1	51.19269402634007	0.30675235723580535	4				NaN	NaN	0	NaN	21	1994	2016
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2021	10.533	NaN	983.2	30	0	147.47	0.142	+			40362	STTSHTTAK	9	36	467.2358703613281	NaN	0	467.2358703613281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STTSHTTAK_	ENSG00000155975|ENST00000324849|VPS37A;ENST00000520639.1_1_5:153873511-153874012:+|nuORF;nc|ENSG00000155975|Q8NEZ2-2|VPS37A	47.657333605630114	0.2228375344433429	4				NaN	NaN	0	NaN	22	1997	2020
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2026	10.55	NaN	17861	30	0	2993	0.214			+	21803	KRAAASQGPL	10	75	499.7902287782031	997.5659046232062	2	499.7905578613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KRAAASQGPL_	REV__ENST00000543661.1_1_11:67231974-67232409:-|nuORF	66.96192283764107	0.30252237217063654	4				NaN	NaN	0	NaN	24	2000	2025
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2027	10.553	NaN	3321	30	0	666.74	0.106				-1	KNSPLMEDF	9	41	548.7506571333349	1095.4867613334698	2	548.75146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_KNSPLM(Oxidation (M))EDF_	ENSG00000142528|ENST00000270617|ZNF473;ZNF473|p.D680Efs*13|1|0.22|ENSG00000142528|chr19:50046482-50046483|AC/-|frameshift_variant;ZNF473|p.F384Lfs*35|1|0.08|ENSG00000142528|chr19:50045591-50045591|T/-|frameshift_variant;ZNF473|p.F545Lfs*2|1|0.3|ENSG00000142528|chr19:50046073-50046073|T/-|frameshift_variant;ZNF473|p.H533Rfs*30|1|0.46|ENSG00000142528|chr19:50046040-50046041|CA/-|frameshift_variant	27.882242232435846	0.5426732730940306	4				NaN	NaN	0	NaN	25	2000	2025
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2028	10.555	NaN	1360.4	30	0	684.32	0.106			+	-1	IVSMAVTQR	9	28	510.7814080222761	NaN	0	510.78131103515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_IVSM(Oxidation (M))AVTQR_	REV__ENST00000475365.1_1_7:144344281-144344407:-|nuORF	23.04248740728303	0.3589936788096251	4				NaN	NaN	0	NaN	26	2000	2025
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2029	10.557	NaN	169.47	30	0	36.156	0.036				-1	FCCGMVIPV	9	13	541.7447509765625	NaN	0	541.7447509765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_FC(Carbamidomethyl (C))C(Carbamidomethyl (C))GMVIPV_	ENST00000298573.8_1_12:12674277-12674340:-|nuORF	8.822329726475273	0.4071219895973803	4				NaN	NaN	0	NaN	27	2000	2025
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2036	10.575	NaN	21662	30	0	4648	0.214	+			21953	KSAPAPKKGSK	11	80	549.8346466180114	1097.6547403028228	2	549.83544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSAPAPKKGSK_	ENSG00000124635|ENST00000339812|H2BC11;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000196890|ENST00000693095|H2BC26;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;ENST00000609585.1_1_1:149399050-149399179:-|nuORF;nc|ENSG00000203814|Q5QNW6-2|H2BC18	152.69292282917763	6.602793133983423E-05	4				NaN	NaN	0	NaN	31	2003	2035
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2037	10.578	NaN	160.25	30	0	26.616	0.035			+	50016	WCFIILGK	8	7	490.2747802734375	NaN	0	490.2747802734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WCFIILGK_	REV__ENST00000433031.1_1_7:57215791-57215998:-|nuORF	5.08689130490037	1.7418937515398478	4				NaN	NaN	0	NaN	32	2003	2035
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2045	10.597	NaN	3924.7	30	0	921.65	0.141	+			44337	TSGKPKQR	8	50	451.2644775287157	NaN	0	451.26446533203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSGKPKQR_	ENST00000327026.7_1_17:80112845-80113109:-|nuORF	53.351449002276354	1.7418937515398478	4				NaN	NaN	0	NaN	37	2006	2044
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2050	10.613	NaN	591.14	30	0	233.45	0.143			+	-1	MLHFLNHV	8	21	526.7716674804688	NaN	0	526.7716674804688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))MLHFLNHV_	REV__ENST00000566316.5_1_16:10481472-10481541:+|nuORF	9.47055586587303	1.741893751539848	4				NaN	NaN	0	NaN	39	2009	2049
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2054	10.63	NaN	901.41	30	0	92.126	0.145	+			2645	AQKGQKAPAQK	11	43	577.836669921875	NaN	0	577.836669921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AQKGQKAPAQK_	ENSG00000188846|ENST00000396203|RPL14	60.11826168202944	0.2317136047664224	4				NaN	NaN	0	NaN	40	2012	2053
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2061	10.65	NaN	337.14	30	0	81.281	0.214	+			48835	VVAVFVQGPA	10	24	493.78546142578125	NaN	0	493.78546142578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVAVFVQGPA_	ENSG00000134371|ENST00000367435|CDC73	24.20275056022122	0.4201028297492154	4				NaN	NaN	0	NaN	44	2015	2060
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2062	10.653	NaN	1187	30	0	341.8	0.106	+			22703	KVAKSPKKAK	10	42	542.8649291992188	NaN	0	542.8649291992188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVAKSPKKAK_	ENSG00000184357|ENST00000331442|H1-5;ENSG00000187837|ENST00000343677|H1-2	46.45678178249821	0.32800322091223805	4				NaN	NaN	0	NaN	45	2015	2060
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2063	10.655	NaN	2667	30	0	789.93	0.106	+			22751	KVDSPSKKK	9	50	508.80841466544337	1015.6022763976868	2	508.8089294433594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KVDSPSKKK_	ENSG00000101577|ENST00000677752|LPIN2;LPIN2|p.I662Yfs*22|1|0.08|ENSG00000101577|chr18:2924502-2924503|-/G|frameshift_variant	88.17693792209575	0.07000514020414955	4				NaN	NaN	0	NaN	46	2015	2060
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2064	10.657	NaN	235.43	30	0	59.264	0.106	+			42032	SWAPALRLQ	9	14	521.294189453125	NaN	0	521.294189453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SWAPALRLQ_	ENST00000505306.5_1_17:48154293-48154716:+|nuORF	10.865556482863946	0.40020666175442315	4				NaN	NaN	0	NaN	47	2015	2060
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2065	10.659	NaN	251.7	30	0	29.848	0.035	+			13361	GLAATLYSLK	10	15	518.8051147460938	NaN	0	518.8051147460938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GLAATLYSLK_	ENSG00000112972|ENST00000325110|HMGCS1;ENST00000508319.1_1_5:43294149-43294911:-|nuORF	9.705651100619752	0.4201028297492154	4				NaN	NaN	0	NaN	48	2015	2060
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2072	10.675	NaN	1539.8	30	0	349.26	0.142	+			19221	KAAGGATPKK	10	42	464.7822212204949	NaN	0	464.7821960449219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAAGGATPKK_	ENSG00000187837|ENST00000343677|H1-2	66.96192283764107	0.17742606645642828	4				NaN	NaN	0	NaN	52	2018	2071
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2084	10.703	NaN	3048.6	30	0	1059	0.214	+			19612	KDGKRITFI	9	43	539.3245239257812	NaN	0	539.3245239257812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KDGKRITFI_	tr|U7T0U8|U7T0U8_FUSNUTranslationinitiationfactorIF-2OS=FusobacteriumnucleatumCTI-5OX=1316586GN=infBPE=3SV=1	32.75053402867276	0.3122164853807509	4				NaN	NaN	0	NaN	61	2021	2083
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2085	10.706	NaN	294.86	30	0	157.93	0.106	+			9424	EKKASEVGR	9	16	502.28033447265625	NaN	0	502.28033447265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EKKASEVGR_	ALK|p.Q908Rfs*3|1|0.19|ENSG00000171094|chr2:29228977-29228977|G/-|frameshift_variant;ALK|p.R620Mfs*7|1|0.03|ENSG00000171094|chr2:29275455-29275456|-/A|frameshift_variant;ALK|p.W915Gfs*24|1|0.42|ENSG00000171094|chr2:29228957-29228957|C/-|frameshift_variant;ENSG00000171094|ENST00000389048|ALK	14.137123925751023	0.3891339986947948	4				NaN	NaN	0	NaN	62	2021	2083
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2086	10.708	NaN	1650.7	30	0	339.34	0.106	+			48001	VSQHLLFHL	9	19	547.308837890625	NaN	0	547.308837890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSQHLLFHL_	LY75|p.R74L|1|0.28|ENSG00000054219|chr2:159898933-159898933|C/A|missense_variant	7.690282842768113	0.40727630907727536	4				NaN	NaN	0	NaN	63	2021	2083
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2087	10.71	NaN	1289.3	30	0	194.67	0.037			+	-1	QNRMLIHEP	9	30	577.2935180664062	NaN	0	577.2935180664062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_QNRM(Oxidation (M))LIHEP_	REV__nc|ENSG00000072952|Q9Y6F6-8|IRAG1	20.94693142431847	0.3660861156085067	4				NaN	NaN	0	NaN	64	2021	2083
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2095	10.819	NaN	3822.8	30	0	780.39	0.214	+			19511	KAVKKTPKKA	10	67	549.8716960463648	1097.7288391595296	2	549.8723754882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAVKKTPKKA_	ENSG00000184357|ENST00000331442|H1-5	89.02883481214508	0.13663399911061233	4				NaN	NaN	0	NaN	69	2024	2094
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2096	10.823	NaN	802.68	30	0	201.04	0.106			+	22545	KTRSAAVRRST	11	39	616.8621215820312	NaN	0	616.8621215820312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTRSAAVRRST_	REV__ENSG00000187808|ENST00000343905|SOWAHD	41.42661286455405	0.376895999158515	4				NaN	NaN	0	NaN	70	2024	2094
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2097	10.825	NaN	349.46	30	0	106.19	0.106			+	143	AAGRRGRG	8	18	400.73486328125	NaN	0	400.73486328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AAGRRGRG_	REV__ENST00000578430.1_1_17:56083680-56084618:-|nuORF	26.79610172149135	1.7418937515398478	4				NaN	NaN	0	NaN	71	2024	2094
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2098	10.827	NaN	967.39	30	0	168.79	0.035	+			21034	KKKKKFSF	8	40	520.8330688476562	NaN	0	520.8330688476562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KKKKKFSF_	ENSG00000175130|ENST00000329421|MARCKSL1	56.72105179125745	1.7418937515398478	4				NaN	NaN	0	NaN	72	2024	2094
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2105	10.843	NaN	18059	30	0	3337.8	0.214	+			22291	KTDPSAAGRKK	11	87	579.8323630589913	1157.6501731847825	2	579.834228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTDPSAAGRKK_	ENSG00000183495|ENST00000389561|EP400;EP400|p.P2793Rfs*46|1|0.3|ENSG00000183495|chr12:132064707-132064707|C/-|frameshift_variant;nc|ENSG00000183495|Q96L91-3|EP400;nc|ENSG00000183495|Q96L91-4|EP400;nc|ENSG00000183495|Q96L91-5|EP400;nc|ENSG00000183495|Q96L91|EP400	163.46403022179925	4.564038370676518E-05	4				NaN	NaN	0	NaN	76	2027	2104
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2106	10.847	NaN	17077	30	0	6660.4	0.106			+	31407	QKLCTILDPK	10	63	386.8909035059921	1157.6508811181764	3	386.89117431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QKLCTILDPK_	REV__ENSG00000196350|ENST00000601693|ZNF729	66.96192283764107	0.30252237217063654	4				NaN	NaN	0	NaN	77	2027	2104
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2107	10.849	NaN	2731.5	30	0	796.62	0.036	+			19497	KATKSPAKPK	10	56	528.3320302866016	1054.649507640003	2	528.8348388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KATKSPAKPK_	ENSG00000184357|ENST00000331442|H1-5	60.69067153575145	0.3595586438680871	4				NaN	NaN	0	NaN	78	2027	2104
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2118	10.874	NaN	574.62	30	0	127.55	0.214				-1	LRPCTAHGRL	10	26	590.8238525390625	NaN	0	590.8238525390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_LRPC(Carbamidomethyl (C))TAHGRL_	ENST00000484758.6_1_1:223441989-223537415:-|nuORF	14.137123925751023	0.4201028297492154	4				NaN	NaN	0	NaN	86	2030	2117
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2119	10.877	NaN	864.21	30	0	205.09	0.106			+	12128	GAGPPPKDK	9	22	433.73858642578125	NaN	0	433.73858642578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GAGPPPKDK_	REV__ENSG00000168502|ENST00000695636|MTCL1;REV__MTCL1|p.G1084Vfs*116|1|0.23|ENSG00000168502|chr18:8798144-8798144|G/-|frameshift_variant;REV__MTCL1|p.G604Afs*38|1|0.5|ENSG00000168502|chr18:8783840-8783840|G/-|frameshift_variant;REV__MTCL1|p.L1858Wfs*5|1|0.26|ENSG00000168502|chr18:8826125-8826125|C/-|frameshift_variant;REV__MTCL1|p.L694Cfs*5|1|0.37|ENSG00000168502|chr18:8784107-8784107|C/-|frameshift_variant;REV__MTCL1|p.P1448Afs*83|1|0.4|ENSG00000168502|chr18:8824888-8824889|-/G|frameshift_variant;REV__MTCL1|p.P1841Lfs*22|1|0.05|ENSG00000168502|chr18:8826071-8826071|C/-|frameshift_variant;REV__MTCL1|p.W1259Efs*14|1|0.09|ENSG00000168502|chr18:8813191-8813192|-/GAGCC|frameshift_variant;REV__nc|ENSG00000168502|Q9Y4B5|MTCL1	10.265252068803164	0.4022383999429647	4				NaN	NaN	0	NaN	87	2030	2117
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2120	10.879	NaN	300.94	30	0	39.601	0.038	+			51035	YKYIGMHTGK	10	21	599.3090209960938	NaN	0	599.3090209960938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YKYIGMHTGK_	tr|U7STV9|U7STV9_FUSNUBiotinsynthaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=bioBPE=3SV=1	12.206681093483082	0.4201028297492154	4				NaN	NaN	0	NaN	88	2030	2117
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2128	10.91	NaN	6817.5	30	0	1808.9	0.213	+			22670	KTYTGHKNEK	10	66	603.3179413411872	1204.6213297491743	2	603.318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTYTGHKNEK_	ENSG00000196363|ENST00000358625|WDR5;ENSG00000196981|ENST00000330689|WDR5B	169.20524454927062	0.003938167316102242	4				NaN	NaN	0	NaN	90	2036	2127
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2129	10.913	NaN	4763.9	30	0	863.35	0.035	+			40136	STQEGVRKK	9	58	516.7926824924282	1031.5708120516563	2	516.7946166992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STQEGVRKK_	ENSG00000136813|ENST00000684092|ECPAS;nc|ENSG00000136813|Q5VYK3|ECPAS	101.25262130126117	0.03792372629710479	4				NaN	NaN	0	NaN	91	2036	2127
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2133	10.927	NaN	1859.9	30	0	767.84	0.143	+			4132	ATEKSVKTK	9	45	496.292931161138	990.571309389076	2	496.29351806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATEKSVKTK_	ENSG00000164611|ENST00000352433|PTTG1;ENST00000519287.1_1_5:159849240-159855685:+|nuORF;ENST00000523659.5_1_5:159849319-159851384:+|nuORF;ENST00000524244.5_1_5:159849319-159849927:+|nuORF	63.53385203322761	0.18415635464017938	4				NaN	NaN	0	NaN	92	2039	2132
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2141	10.959	NaN	1944.3	30	0	958.25	0.142			+	46962	VKGSRNRP	8	34	457.269773911388	912.524994889576	2	457.270263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VKGSRNRP_	REV__ENST00000306085.10_3_7:100737901-100738075:+|nuORF	23.04248740728303	0.7814162927298575	4				NaN	NaN	0	NaN	94	2045	2140
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2146	10.976	NaN	11435	30	0	2364.4	0.214	+			13949	GSAEPTKTRK	10	73	537.7982666015881	1073.5819802699762	2	537.800048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSAEPTKTRK_	ENSG00000101199|ENST00000370283|ARFGAP1;ENST00000370275.8_2_20:61917492-61919222:+|nuORF;ENST00000395285.3_1_20:61917669-61919222:+|nuORF;ENST00000468975.6_1_20:61915834-61919222:+|nuORF;ENST00000518618.2_1_20:61917181-61919222:+|nuORF;nc|ENSG00000101199|Q8N6T3-2|ARFGAP1;nc|ENSG00000101199|Q8N6T3-4|ARFGAP1;nc|ENSG00000101199|Q8N6T3-5|ARFGAP1	89.02883481214508	0.13663399911061233	4				NaN	NaN	0	NaN	96	2048	2145
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2147	10.98	NaN	6400.5	30	0	1332.8	0.106	+			1849	AIKKNNPRK	9	59	534.835436053342	1067.656319173484	2	534.8364868164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AIKKNNPRK_	ENSG00000060138|ENST00000228251|YBX3;ENSG00000065978|ENST00000321358|YBX1;ENST00000542002.5_1_12:10853889-10868397:-|nuORF;nc|ENSG00000060138|P16989-2|YBX3;nc|ENSG00000060138|P16989-3|YBX3	76.7741389293348	0.11149722112137898	4				NaN	NaN	0	NaN	97	2048	2145
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2148	10.982	NaN	1563.6	30	0	573.56	0.035	+			40766	SVDKSKPDK	9	42	502.2741055067007	1002.5336580802015	2	502.27496337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVDKSKPDK_	ENSG00000023608|ENST00000216294|SNAPC1;SNAPC1|p.D214*|1|0.21|ENSG00000023608|chr14:61776192-61776193|-/T|frameshift_variant;SNAPC1|p.F213Lfs*7|2|0.15|ENSG00000023608|chr14:61776193-61776193|T/-|frameshift_variant	63.42647028704847	0.1850514934184437	4				NaN	NaN	0	NaN	98	2048	2145
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2157	11.003	NaN	2219.2	30	0	434.21	0.214	+			4529	ATKSPAKPK	9	48	464.2843287147586	926.5541044963172	2	464.2843017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATKSPAKPK_	ENSG00000184357|ENST00000331442|H1-5	95.81516180277367	0.04847050768394289	4				NaN	NaN	0	NaN	104	2051	2156
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2158	11.007	NaN	4510.9	30	0	1334.3	0.106				-1	SGLDLPMKVV	10	34	358.86764763725375	1073.5811135119613	3	358.8680725097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_SGLDLPM(Oxidation (M))KVV_	ENSG00000033011|ENST00000262374|ALG1;ENSG00000251287|ENST00000425059|ALG1L2;ENST00000482834.1_1_3:155761946-155762456:-|nuORF;nc|ENSG00000033011|Q9BT22-2|ALG1	22.579656572578934	0.6954366826851017	4				NaN	NaN	0	NaN	105	2051	2156
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2159	11.009	NaN	1100.6	30	0	729.87	0.106			+	14007	GSETSVKKK	9	28	482.2767410286924	NaN	0	482.27667236328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GSETSVKKK_	REV__ENST00000478272.1_1_13:101287253-101288829:-|nuORF	20.94693142431847	0.3660861156085067	4				NaN	NaN	0	NaN	106	2051	2156
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2160	11.01	NaN	1029	30	0	109.47	0.034	+			22702	KVAKSPKKA	9	38	478.8154296875	NaN	0	478.8154296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KVAKSPKKA_	ENSG00000184357|ENST00000331442|H1-5;ENSG00000187837|ENST00000343677|H1-2	52.936696900407355	0.1864545979552969	4				NaN	NaN	0	NaN	107	2051	2156
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2166	11.025	NaN	5766.4	30	0	733.21	0.214	+			16240	HEEHSRAAA	9	61	504.2357507501734	1006.4569485671468	2	504.2363586425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HEEHSRAAA_	COL4A1|p.G1369Rfs*33|1|0.53|ENSG00000187498|chr13:110164908-110164909|-/G|frameshift_variant;COL4A1|p.P1437Qfs*12|2|0.09|ENSG00000187498|chr13:110162382-110162382|G/-|frameshift_variant;ENSG00000187498|ENST00000375820|COL4A1;nc|ENSG00000187498|P02462-2|COL4A1	117.5257442709337	0.022697614825424036	4				NaN	NaN	0	NaN	110	2054	2165
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2167	11.029	NaN	2608.3	30	0	733.27	0.106				-1	MNTMCVMMA	9	30	553.1980778882058	NaN	0	553.19775390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term),2 Oxidation (M)	_(Acetyl (Protein N-term))MNTM(Oxidation (M))CVM(Oxidation (M))MA_	DNAJC28|p.Y5C|1|0.15|ENSG00000177692|chr21:33489380-33489380|T/C|missense_variant	12.959181472943097	0.3931207604263714	4				NaN	NaN	0	NaN	111	2054	2165
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2168	11.031	NaN	1492.3	30	0	422.76	0.106	+			19489	KATGAATPKK	10	43	486.7950057479026	971.5754585626053	2	486.79534912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KATGAATPKK_	ENSG00000168298|ENST00000304218|H1-4	109.43880257439609	0.049666173740610824	4				NaN	NaN	0	NaN	112	2054	2165
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2169	11.032	NaN	2217.8	30	0	500.85	0.106	+			45129	TVKPGAKKDTK	11	52	586.8534692923847	1171.6923856515693	2	587.3555297851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TVKPGAKKDTK_	ENSG00000106541|ENST00000419304|AGR2	63.42647028704847	0.292869158926425	4				NaN	NaN	0	NaN	113	2054	2165
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2170	11.034	NaN	843.57	30	0	64.813	0.036			+	-1	RCLISSSGGN	10	36	525.754329023495	NaN	0	525.7540283203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_RC(Carbamidomethyl (C))LISSSGGN_	REV__SNTB2|p.Y481C|1|0.26|ENSG00000168807|chr16:69299686-69299686|A/G|missense_variant	24.519189625965996	0.41966695327750003	4				NaN	NaN	0	NaN	114	2054	2165
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2179	11.056	NaN	893.97	30	0	392.9	0.215	+			38420	SSAGTSQK	8	17	383.1905530049803	764.3665530767606	2	383.1907958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSAGTSQK_	nc|ENSG00000075651|Q13393-3|PLD1	8.822329726475273	0.7821568878176242	4				NaN	NaN	0	NaN	120	2057	2178
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2180	11.059	NaN	1010.3	30	0	242.25	0.034			+	31435	QKPNGLKK	8	25	456.7853698730469	NaN	0	456.7853698730469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QKPNGLKK_	REV__ENSG00000083642|ENST00000315596|PDS5B;REV__nc|ENSG00000083642|Q9NTI5-2|PDS5B;REV__PDS5B|p.G721Dfs*35|1|0.13|ENSG00000083642|chr13:32732132-32732132|A/-|frameshift_variant;REV__PDS5B|p.K1268Rfs*8|1|0.07|ENSG00000083642|chr13:32770296-32770296|A/-|frameshift_variant;REV__PDS5B|p.K1287Rfs*22|1|0.26|ENSG00000083642|chr13:32770351-32770351|A/-|frameshift_variant;REV__PDS5B|p.K693Qfs*8|1|0.11|ENSG00000083642|chr13:32710054-32710055|-/T|frameshift_variant;REV__PDS5B|p.N1390Cfs*12|1|0.44|ENSG00000083642|chr13:32770750-32770751|AA/-|frameshift_variant;REV__PDS5B|p.S1198Vfs*10|1|0.28|ENSG00000083642|chr13:32764556-32764556|A/-|frameshift_variant	19.359975847455235	1.7418937515398478	4				NaN	NaN	0	NaN	121	2057	2178
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2187	11.077	NaN	6027.7	30	0	2985.9	0.214	+			19490	KATGAATPKK	10	46	324.86557932405026	971.5749085723508	3	324.86590576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KATGAATPKK_	ENSG00000168298|ENST00000304218|H1-4	51.52775601994872	0.4429225830406686	4				NaN	NaN	0	NaN	125	2060	2186
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2188	11.081	NaN	1868.8	30	0	488.31	0.106	+			19566	KCSEPQSSK	9	49	497.2363586994873	992.4581644657746	2	497.2369384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KCSEPQSSK_	ENSG00000008517|ENST00000525643|IL32;nc|ENSG00000008517|P24001-3|IL32;nc|ENSG00000008517|P24001-4|IL32;nc|ENSG00000008517|P24001-5|IL32;nc|ENSG00000008517|P24001-6|IL32;nc|ENSG00000008517|P24001-7|IL32;nc|ENSG00000008517|P24001|IL32	59.93077597824379	0.21419174904018318	4				NaN	NaN	0	NaN	126	2060	2186
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2189	11.083	NaN	1383.3	30	0	661.4	0.106	+			6735	CAPKTFWVN	9	29	533.2632932505895	1064.512033567979	2	533.264404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_CAPKTFWVN_	ENSG00000124006|ENST00000404537|OBSL1;ENST00000465149.1_1_2:220420747-220435459:-|nuORF;nc|ENSG00000124006|O75147-1|OBSL1;nc|ENSG00000124006|O75147-2|OBSL1;nc|ENSG00000124006|O75147-4|OBSL1;OBSL1-MRPL2|1|fusion	35.61828744233558	0.47037581924408073	4				NaN	NaN	0	NaN	127	2060	2186
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2190	11.085	NaN	598.95	30	0	83.962	0.036			+	9318	EIEGRRLTL	9	35	543.8182373046875	NaN	0	543.8182373046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EIEGRRLTL_	REV__ENSG00000106665|ENST00000223398|CLIP2;REV__nc|ENSG00000106665|Q9UDT6-2|CLIP2	25.125986553469783	0.3507112406247533	4				NaN	NaN	0	NaN	128	2060	2186
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2203	11.112	NaN	7128.2	30	0	2260.2	0.214	+			3518	ASSKDAIKKK	10	66	538.3269616541265	1074.639370375053	2	538.3274536132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASSKDAIKKK_	DSTN|p.Y117H|1|0.26|ENSG00000125868|chr20:17604592-17604592|T/C|missense_variant;ENSG00000125868|ENST00000246069|DSTN;ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65623104-65623215:-|nuORF;nc|ENSG00000125868|P60981-2|DSTN;nc|ENSG00000165410|Q9Y281-3|CFL2	109.43880257439609	0.049666173740610824	4				NaN	NaN	0	NaN	138	2063	2202
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2204	11.115	NaN	5358.2	30	0	762.6	0.106	+			41612	SVQKQANEK	9	65	516.2776281102277	1030.5407032872554	2	516.2775268554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVQKQANEK_	ENSG00000120800|ENST00000261637|UTP20	169.6522961985778	0.0028262690464207238	4				NaN	NaN	0	NaN	139	2063	2202
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2205	11.117	NaN	2509.9	30	0	406.81	0.106	+			2706	AQRIMISRQ	9	32	368.208251953125	NaN	0	368.208251953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AQRIMISRQ_	tr|U7STY0|U7STY0_FUSNU4-hydroxybutyryl-CoAdehydratase/vinylacetyl-CoA-Delta-isomeraseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01228PE=4SV=1	28.081489160057373	0.33578952234132536	4				NaN	NaN	0	NaN	140	2063	2202
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2206	11.119	NaN	508.68	30	0	360.94	0.106			+	47496	VQGVQNKI	8	11	443.2610778808594	NaN	0	443.2610778808594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VQGVQNKI_	REV__ENST00000551130.1_1_12:52635330-52637101:+|nuORF	4.6817480819748125	1.7418937515398478	4				NaN	NaN	0	NaN	141	2063	2202
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2207	11.121	NaN	581.55	30	0	122.68	0.036			+	49307	VVQSLNTLTGA	11	24	551.8090209960938	NaN	0	551.8090209960938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVQSLNTLTGA_	REV__ENSG00000100359|ENST00000248929|SGSM3;REV__nc|ENSG00000100359|Q96HU1-2|SGSM3	31.634271133179894	0.4244354679066847	4				NaN	NaN	0	NaN	142	2063	2202
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2219	11.147	NaN	5285.1	30	0	1574.8	0.214			+	6181	AVQMEKKKK	9	62	545.326228812112	1088.637904691024	2	545.3270263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVQMEKKKK_	REV__ENSG00000115970|ENST00000405975|THADA;REV__nc|ENSG00000115970|Q6YHU6-3|THADA;REV__nc|ENSG00000115970|Q6YHU6-5|THADA;REV__nc|ENSG00000115970|Q6YHU6-6|THADA;REV__THADA|p.A593Lfs*5|2|0.35|ENSG00000115970|chr2:43572945-43572945|C/-|frameshift_variant	117.5257442709337	0.022697614825424036	4				NaN	NaN	0	NaN	151	2066	2218
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2220	11.15	NaN	3305.3	30	0	1193.1	0.106			+	6182	AVQMEKKKK	9	38	363.8862499977415	1088.6369205934245	3	363.8866882324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVQMEKKKK_	REV__ENSG00000115970|ENST00000405975|THADA;REV__nc|ENSG00000115970|Q6YHU6-3|THADA;REV__nc|ENSG00000115970|Q6YHU6-5|THADA;REV__nc|ENSG00000115970|Q6YHU6-6|THADA;REV__THADA|p.A593Lfs*5|2|0.35|ENSG00000115970|chr2:43572945-43572945|C/-|frameshift_variant	56.72105179125745	0.24094814563026265	4				NaN	NaN	0	NaN	152	2066	2218
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2221	11.152	NaN	557.61	30	0	238.09	0.106	+			4735	ATMLLLSLTL	10	22	359.22052001953125	NaN	0	359.22052001953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATMLLLSLTL_	ENST00000572144.5_1_16:67965629-67965878:-|nuORF;ENST00000576408.1_1_16:67964677-67965878:-|nuORF	11.635926663890343	0.4201028297492154	4				NaN	NaN	0	NaN	153	2066	2218
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2222	11.154	NaN	717.18	30	0	124.54	0.035			+	9448	EKLQNVRQ	8	40	507.7882080078125	NaN	0	507.7882080078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EKLQNVRQ_	REV__ENSG00000153879|ENST00000284000|CEBPG	27.882242232435846	1.7418937515398478	4				NaN	NaN	0	NaN	154	2066	2218
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2234	11.179	NaN	1044.5	30	0	514.73	0.214			+	31360	QKCKLPKE	8	27	487.281005174399	NaN	0	487.2810363769531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QKCKLPKE_	REV__ENSG00000168661|ENST00000601142|ZNF30;REV__ENST00000601957.5_1_19:35433558-35435739:+|nuORF;REV__nc|ENSG00000168661|P17039-2|ZNF30;REV__ZNF30|p.K600Nfs*16|4|0.2|ENSG00000168661|chr19:34944761-34944761|A/-|frameshift_variant	38.80614096846853	1.7418937515398478	4				NaN	NaN	0	NaN	163	2069	2233
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2235	11.183	NaN	279.59	30	0	85.844	0.106			+	30289	PTKQQPQQ	8	16	477.7532653808594	NaN	0	477.7532653808594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PTKQQPQQ_	REV__ENSG00000070444|ENST00000174618|MNT	12.959181472943097	1.7418937515398478	4				NaN	NaN	0	NaN	164	2069	2233
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2236	11.185	NaN	19879	30	0	4399.6	0.106	+			40144	STQKGQIKK	9	69	509.3056034556157	1016.5966539780314	2	509.3072814941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STQKGQIKK_	ENSG00000171241|ENST00000303383|SHCBP1	162.25246889848123	0.0040893836092247005	4				NaN	NaN	0	NaN	165	2069	2233
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2237	11.187	NaN	3907.6	30	0	1199.9	0.106	+			19414	KAPKSPAKAK	10	48	342.5533107779587	1024.6381029340762	3	342.55419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KAPKSPAKAK_	ENSG00000168298|ENST00000304218|H1-4	48.601550744091256	0.46988609897316763	4				NaN	NaN	0	NaN	166	2069	2233
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2238	11.188	NaN	2081.1	30	0	581.63	0.035	+			4524	ATKQKSNSK	9	52	496.2804860484853	990.5464191637706	2	496.28082275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATKQKSNSK_	ENST00000267843.8_1_15:49715598-49716258:+|nuORF	56.72105179125745	0.24094814563026265	4				NaN	NaN	0	NaN	167	2069	2233
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2250	11.214	NaN	3015.5	30	0	849.77	0.214	+			22362	KTHGKSTLK	9	47	500.3002385022912	998.5859240713825	2	500.30059814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTHGKSTLK_	ENSG00000197724|ENST00000359246|PHF2;PHF2|p.K492Dfs*21|1|0.2|ENSG00000197724|chr9:93660330-93660331|AA/-|frameshift_variant;PHF2|p.K492Rfs*6|1|0.4|ENSG00000197724|chr9:93660330-93660330|A/-|frameshift_variant;PHF2|p.S954Efs*9|1|0.47|ENSG00000197724|chr9:93676611-93676612|-/A|frameshift_variant	51.52775601994872	0.28504342437107444	4				NaN	NaN	0	NaN	176	2072	2249
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2251	11.218	NaN	2237.9	30	0	543.56	0.106			+	31907	QQIPQGLQK	9	46	520.297770482919	NaN	0	520.2977905273438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QQIPQGLQK_	REV__ENSG00000113716|ENST00000502717|HMGXB3	60.97194046774394	0.14517358171632622	4				NaN	NaN	0	NaN	177	2072	2249
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2252	11.22	NaN	11443	30	0	1799.2	0.106	+			5489	AVADAQKRK	9	67	493.7904293591986	985.5663057851972	2	493.791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVADAQKRK_	ENSG00000161526|ENST00000584667|SAP30BP;ENST00000293208.13_1_17:73701692-73702598:+|nuORF;ENST00000578756.5_1_17:73699860-73702598:+|nuORF;ENST00000580322.5_1_17:73702024-73702598:+|nuORF;ENST00000580601.5_1_17:73689468-73702598:+|nuORF;ENST00000583329.5_1_17:73699767-73702598:+|nuORF;nc|ENSG00000161526|Q9UHR5-2|SAP30BP	138.06239232086	0.011389075116295402	4				NaN	NaN	0	NaN	178	2072	2249
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2253	11.221	NaN	343.13	30	0	64.252	0.106			+	28609	NKRHGLHHG	9	20	528.2840576171875	NaN	0	528.2840576171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NKRHGLHHG_	REV__sp|P16810|IR12_HCMVAUncharacterizedproteinIRL12OS=Humancytomegalovirus(strainAD169)OX=10360PE=4SV=1	8.231297230196988	0.4072763090772754	4				NaN	NaN	0	NaN	179	2072	2249
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2254	11.223	NaN	408.38	30	0	55.758	0.039			+	-1	ELCGQSAIYTK	11	31	635.3115479097368	NaN	0	635.3119506835938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_ELC(Carbamidomethyl (C))GQSAIYTK_	REV__ENSG00000111679|ENST00000318974|PTPN6;REV__ENST00000416215.6_1_12:7061038-7070080:+|nuORF;REV__nc|ENSG00000111679|P29350-2|PTPN6;REV__nc|ENSG00000111679|P29350-3|PTPN6;REV__nc|ENSG00000111679|P29350-4|PTPN6	35.15202426646627	0.40875833226131825	4				NaN	NaN	0	NaN	180	2072	2249
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2272	11.278	NaN	3266	30	0	911.63	0.214	+			14659	GTIDKTKNNK	10	60	559.8120188171614	1117.6094847011227	2	559.812744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTIDKTKNNK_	ENSG00000151806|ENST00000281543|GUF1;GUF1|p.K645Sfs*2|5|0.23|ENSG00000151806|chr4:44698598-44698598|A/-|frameshift_variant;GUF1|p.L162Yfs*15|1|0.15|ENSG00000151806|chr4:44681178-44681178|T/-|frameshift_variant;GUF1|p.P246Sfs*2|1|0.21|ENSG00000151806|chr4:44686017-44686018|-/C|frameshift_variant	112.10723106719422	0.0417416748461292	4				NaN	NaN	0	NaN	189	2081	2271
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2273	11.282	NaN	1723.5	30	0	419.77	0.106	+			4213	ATGAATPKK	9	41	422.747586778554	843.4806206239081	2	422.7481994628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATGAATPKK_	ENSG00000168298|ENST00000304218|H1-4	101.25262130126117	0.03792372629710479	4				NaN	NaN	0	NaN	190	2081	2271
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2274	11.284	NaN	1325.8	30	0	309.18	0.035	+			36805	SIDSSRKNK	9	52	517.782681461117	1033.550809989034	2	517.78271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SIDSSRKNK_	nc|ENSG00000189195|Q5XKL5-4|BTBD8;nc|ENSG00000189195|Q5XKL5|BTBD8	56.72105179125745	0.24094814563026265	4				NaN	NaN	0	NaN	191	2081	2271
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2284	11.307	NaN	5512.6	30	0	2086.1	0.214	+			15395	GTYEKAKQK	9	63	526.7903520410647	1051.5661511489293	2	526.791748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTYEKAKQK_	ENSG00000179562|ENST00000321407|GCC1;GCC1|p.T633Afs*8|1|0.05|ENSG00000179562|chr7:127582446-127582447|-/CA|frameshift_variant	104.0567914643314	0.03506238181059741	4				NaN	NaN	0	NaN	198	2084	2283
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2285	11.311	NaN	1195.8	30	0	181.38	0.036	+			17184	HTREYQEK	8	30	545.7652587890625	NaN	0	545.7652587890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HTREYQEK_	ENST00000525002.5_1_6:135521662-135539115:+|nuORF	21.9598887501803	1.7418937515398478	4				NaN	NaN	0	NaN	199	2084	2283
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2292	11.328	NaN	8406.2	30	0	2719.7	0.214			+	10331	ETSRMLLVA	9	60	510.28259667163843	1018.5506404100769	2	510.2834167480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ETSRMLLVA_	REV__ENSG00000177201|ENST00000641276|OR2T12;REV__OR2T12|p.R232H|1|0.1|ENSG00000177201|chr1:248294884-248294884|C/T|missense_variant	38.80614096846853	0.43426287593479557	4				NaN	NaN	0	NaN	203	2087	2291
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2293	11.331	NaN	6236.5	30	0	2401.4	0.034	+			19214	KAAGAGKVTK	10	56	465.7896152736082	929.5646776140164	2	465.7901611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KAAGAGKVTK_	ENSG00000156508|ENST00000309268|EEF1A1;ENST00000359165.5_1_12:19609181-19609565:-|nuORF;ENST00000436459.2_1_9:135895553-135896258:+|nuORF;ENST00000447052.1_1_21:24762753-24763314:+|nuORF;ENST00000547505.2_1_12:44054544-44054901:+|nuORF;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	140.11223852658463	0.010724162804194332	4				NaN	NaN	0	NaN	204	2087	2291
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2304	11.355	NaN	5214.2	30	0	1873.1	0.215				-1	KKMTSIKT	8	43	476.7786198788358	951.5426868244716	2	476.7784423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_KKM(Oxidation (M))TSIKT_	PPIG|p.N420Mfs*33|1|0.4|ENSG00000138398|chr2:169636512-169636512|A/-|frameshift_variant	44.116797842482775	0.6307669463330267	4				NaN	NaN	0	NaN	212	2090	2303
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2305	11.358	NaN	2034	30	0	562.69	0.106			+	31609	QLWSPLQP	8	34	484.7641029046447	NaN	0	484.7642517089844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QLWSPLQP_	REV__ENSG00000104147|ENST00000220514|OIP5	23.04248740728303	1.7418937515398478	4				NaN	NaN	0	NaN	213	2090	2303
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2306	11.36	NaN	1161.4	30	0	394.51	0.106			+	4381	ATHAVAPKPQ	10	20	340.5244140625	NaN	0	340.5244140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATHAVAPKPQ_	REV__ENSG00000140022|ENST00000614646|STON2;REV__ENST00000555284.1_1_14:81736911-81745120:-|nuORF;REV__nc|ENSG00000140022|Q8WXE9-3|STON2;REV__nc|ENSG00000140022|Q8WXE9|STON2	28.081489160057373	0.40797012399963245	4				NaN	NaN	0	NaN	214	2090	2303
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2307	11.362	NaN	1418.6	30	0	820.42	0.106			+	27773	MRNPLFLA	8	22	481.26903800744714	960.5235230816943	2	481.26922607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MRNPLFLA_	REV__ENSG00000173253|ENST00000358146|DMRT2;REV__ENST00000259622.10_2_9:1056133-1057270:+|nuORF;REV__ENST00000382255.7_2_9:1055783-1057270:+|nuORF;REV__nc|ENSG00000173253|Q9Y5R5-3|DMRT2	9.47055586587303	0.7831821681235687	4				NaN	NaN	0	NaN	215	2090	2303
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2308	11.364	NaN	6038.1	30	0	668.41	0.106	+			41819	SVSSRQAQK	9	68	495.7698690913143	989.5251852494287	2	495.7708740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVSSRQAQK_	ENSG00000046604|ENST00000261590|DSG2	106.68306549817024	0.032382560583716295	4				NaN	NaN	0	NaN	216	2090	2303
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2309	11.366	NaN	1811	30	0	498.95	0.035	+			3204	ASKKPLKEK	9	52	514.8273315429688	NaN	0	514.8273315429688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASKKPLKEK_	ENSG00000120029|ENST00000370033|ARMH3	56.43379154798735	0.16452882468284893	4				NaN	NaN	0	NaN	217	2090	2303
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2320	11.391	NaN	452.73	30	0	130.16	0.143				-1	CLKVGEVTA	9	19	488.7605285644531	NaN	0	488.7605285644531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_C(Carbamidomethyl (C))LKVGEVTA_	ENST00000305135.9_1_3:183529275-183529383:+|nuORF	12.206847966760668	0.39566704307768535	4				NaN	NaN	0	NaN	225	2093	2319
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2329	11.413	NaN	4995.4	30	0	2193.1	0.214			+	37598	SLPNVFSM	8	39	447.72182499278574	893.4290970523715	2	447.7231140136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLPNVFSM_	REV__ENSG00000172399|ENST00000307128|MYOZ2	25.450171626174864	0.7628259754767981	4				NaN	NaN	0	NaN	231	2096	2328
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2330	11.417	NaN	4779.8	30	0	965.66	0.106	+			41455	SVNNKVSKK	9	60	502.298043304757	1002.581533676314	2	502.299072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVNNKVSKK_	ENSG00000188938|ENST00000375412|FAM120AOS	128.60217544463768	0.015992218256422188	4				NaN	NaN	0	NaN	232	2096	2328
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2331	11.419	NaN	2393.8	30	0	506.14	0.106			+	44163	TQPPCHLD	8	24	455.70681872353276	NaN	0	455.70672607421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TQPPCHLD_	REV__ENST00000535984.1_1_11:113285130-113295217:-|nuORF	11.511019455917149	1.7418937515398478	4				NaN	NaN	0	NaN	233	2096	2328
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2332	11.42	NaN	1379.1	30	0	372.64	0.106	+			1580	AGIPGVPGAGA	11	42	433.7383610004915	865.4621690677831	2	433.73907470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AGIPGVPGAGA_	ENSG00000081059|ENST00000342854|TCF7;nc|ENSG00000081059|P36402-11|TCF7;nc|ENSG00000081059|P36402-13|TCF7;nc|ENSG00000081059|P36402-15|TCF7;nc|ENSG00000081059|P36402-3|TCF7;nc|ENSG00000081059|P36402-7|TCF7;nc|ENSG00000081059|P36402-9|TCF7;nc|ENSG00000081059|P36402|TCF7;TCF7|p.L162Tfs*36|1|0.17|ENSG00000081059|chr5:134138095-134138098|CTCT/-|frameshift_variant;TCF7|p.S135Rfs*64|3|0.16|ENSG00000081059|chr5:134115989-134115989|C/-|frameshift_variant	50.0245360154114	0.4207767895280948	4				NaN	NaN	0	NaN	234	2096	2328
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2333	11.422	NaN	973.99	30	0	125.42	0.031	+			13683	GPGRAGVT	8	38	357.69771253085776	713.3808721285155	2	357.6982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GPGRAGVT_	ENST00000494373.1_1_2:54014190-54014463:+|nuORF	65.89745868150666	0.44339748671293633	4				NaN	NaN	0	NaN	235	2096	2328
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2345	11.448	NaN	2365.2	30	0	883.28	0.214	+			36682	SGPAGREK	8	43	401.2140035870992	800.4134542409985	2	401.21417236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SGPAGREK_	ENSG00000136826|ENST00000374672|KLF4;KLF4|p.D429Lfs*13|1|0.08|ENSG00000136826|chr9:107485905-107485906|TC/-|frameshift_variant;nc|ENSG00000136826|O43474-5|KLF4;nc|ENSG00000136826|O43474-6|KLF4;nc|ENSG00000136826|O43474|KLF4	77.31757898189308	0.345924878368729	4				NaN	NaN	0	NaN	244	2099	2344
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2346	11.451	NaN	1641.5	30	0	844.31	0.106			+	2393	ANSTAIIKQ	9	38	473.2714272703931	NaN	0	473.2713317871094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ANSTAIIKQ_	REV__tr|U7SFV5|U7SFV5_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02248PE=4SV=1	31.529811441608018	0.3183796599642538	4				NaN	NaN	0	NaN	245	2099	2344
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2347	11.453	NaN	3005.6	30	0	1131.4	0.106	+			51251	YQPGNDQP	8	20	459.7026811253756	NaN	0	459.70257568359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YQPGNDQP_	ENSG00000205108|ENST00000378788|FAM205A;nc|ENSG00000257198|Q63HN1|SPATA31F2P	25.450171626174864	1.7418937515398478	4				NaN	NaN	0	NaN	246	2099	2344
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2348	11.455	NaN	2590.6	30	0	310.24	0.106	+			6160	AVQGHASQEK	10	51	527.7670735668652	NaN	0	527.7671508789062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVQGHASQEK_	ENSG00000137076|ENST00000314888|TLN1;nc|ENSG00000137076|Q9Y490-2|TLN1;TLN1|p.L2424_I2425insETY|1|0.09|ENSG00000137076|chr9:35698422-35698423|-/TATGTTTCT|inframe_insertion	96.66504779109242	0.028658552827671036	4				NaN	NaN	0	NaN	247	2099	2344
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2349	11.457	NaN	1401.2	30	0	188.15	0.106				-1	KLCTCQDC	8	20	485.6931545785796	NaN	0	485.69268798828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_KLC(Carbamidomethyl (C))TCQDC_	ENSG00000012963|ENST00000013070|UBR7	17.364965105453717	1.7418937515398478	4				NaN	NaN	0	NaN	248	2099	2344
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2350	11.459	NaN	1116.6	30	0	362.83	0.035			+	31813	QPPSALRRA	9	34	498.29004609544995	994.5655392576999	2	498.2904357910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QPPSALRRA_	REV__ENST00000424094.6_1_20:57394171-57417508:-|nuORF	19.996771675451527	0.6112419832031292	4				NaN	NaN	0	NaN	249	2099	2344
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2364	11.488	NaN	48535	30	0	14818	0.215	+			22900	KVMKDAKTK	9	82	524.8120795468748	1047.6096061605494	2	524.8131103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVMKDAKTK_	ENSG00000198900|ENST00000361337|TOP1	204.4243087208965	1.4601778531241419E-05	4				NaN	NaN	0	NaN	260	2102	2363
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2365	11.492	NaN	4852.7	30	0	802.42	0.106	+			30817	QEEIEKIRQT	10	73	637.3401562419011	1272.6657595506022	2	637.3411254882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QEEIEKIRQT_	CEP350|p.I2751Nfs*29|1|0.24|ENSG00000135837|chr1:180094350-180094351|-/A|frameshift_variant;CEP350|p.N2889Ifs*10|1|0.38|ENSG00000135837|chr1:180095671-180095671|A/-|frameshift_variant;CEP350|p.R2078Gfs*6|1|0.43|ENSG00000135837|chr1:180084119-180084119|A/-|frameshift_variant;CEP350|p.Y2613Mfs*8|1|0.07|ENSG00000135837|chr1:180093938-180093938|T/-|frameshift_variant;ENSG00000135837|ENST00000367607|CEP350	63.53385203322761	0.33370026130094593	4				NaN	NaN	0	NaN	261	2102	2363
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2366	11.494	NaN	3077.8	30	0	258.21	0.106	+			19509	KAVEKQQP	8	53	464.2660718444098	926.5175907556196	2	464.2659606933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KAVEKQQP_	ENSG00000166197|ENST00000605788|NOLC1;nc|ENSG00000166197|Q14978-2|NOLC1;nc|ENSG00000166197|Q14978-3|NOLC1	35.61828744233558	0.6843154725607303	4				NaN	NaN	0	NaN	262	2102	2363
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2367	11.496	NaN	3334.6	30	0	824.56	0.106	+			31697	QNLLRQADL	9	55	535.802490234375	NaN	0	535.802490234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QNLLRQADL_	DNAH1|p.K1480Sfs*13|1|0.07|ENSG00000114841|chr3:52359941-52359941|G/-|frameshift_variant;ENSG00000114841|ENST00000420323|DNAH1;ENST00000486752.5_1_3:52350520-52422757:+|nuORF;ENST00000497875.1_1_3:52356446-52387784:+|nuORF;nc|ENSG00000114841|Q9P2D7-3|DNAH1;nc|ENSG00000114841|Q9P2D7-6|DNAH1;nc|ENSG00000114841|Q9P2D7-8|DNAH1	58.78195531508484	0.1545138866451181	4				NaN	NaN	0	NaN	263	2102	2363
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2368	11.497	NaN	913.85	30	0	162.17	0.106			+	41489	SVPCHSQGQ	9	39	471.7084655761719	NaN	0	471.7084655761719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVPCHSQGQ_	REV__ENST00000570769.5_1_16:3690834-3690951:+|nuORF	26.69291269510374	0.34280015626154364	4				NaN	NaN	0	NaN	264	2102	2363
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2369	11.499	NaN	622.38	30	0	124.78	0.034	+			32621	QYPAPHPY	8	27	486.7314147949219	NaN	0	486.7314147949219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QYPAPHPY_	DVL2|p.A601Qfs*80|1|0.48|ENSG00000004975|chr17:7226275-7226275|C/-|frameshift_variant;DVL2|p.S562N|1|0.1|ENSG00000004975|chr17:7226498-7226498|C/T|missense_variant;ENSG00000004975|ENST00000005340|DVL2	14.664097394203935	1.7418937515398478	4				NaN	NaN	0	NaN	265	2102	2363
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2370	11.5	NaN	774.13	30	0	87.528	0.139	+			20093	KEKITFIT	8	35	490.29266357421875	NaN	0	490.29266357421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KEKITFIT_	CLASRP|p.E323K|1|0.5|ENSG00000104859|chr19:45064073-45064073|G/A|missense_variant	26.79610172149135	1.7418937515398478	4				NaN	NaN	0	NaN	266	2102	2363
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2382	11.527	NaN	20680	30	0	8080.6	0.214	+			4604	ATLKGHTKK	9	72	492.3031688330269	982.5917847328539	2	492.3031921386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATLKGHTKK_	ENSG00000110107|ENST00000227524|PRPF19;PRPF19|p.S440Hfs*2|1|0.3|ENSG00000110107|chr11:60897945-60897945|A/-|frameshift_variant	76.16968421966216	0.11411088698345859	4				NaN	NaN	0	NaN	275	2105	2381
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2383	11.531	NaN	4155.2	30	0	792.02	0.106				-1	 	0	53	463.2818532127783	924.5491534923566	2	463.28253173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	276	2105	2381
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2384	11.533	NaN	1373.1	30	0	346.8	0.106				-1	 	0	33	354.7237243652344	NaN	0	354.7237243652344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	277	2105	2381
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2385	11.534	NaN	1060.6	30	0	187.05	0.106	+			11227	FIEVETQK	8	48	497.2640380859375	NaN	0	497.2640380859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FIEVETQK_	ENSG00000126953|ENST00000372902|TIMM8A;ENST00000419283.1_1_2:162933923-162934139:-|nuORF;ENST00000480575.1_1_X:100603377-100603652:-|nuORF	35.61828744233558	1.7418937515398478	4				NaN	NaN	0	NaN	278	2105	2381
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2386	11.536	NaN	2615.6	30	0	646.77	0.106			+	13433	GLGVLWECQIR	11	39	425.22935252248783	1272.6662281676636	3	425.229736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GLGVLWECQIR_	REV__ENST00000550614.5_2_14:105455660-105455831:+|nuORF	26.69291269510374	0.70980431218767	4				NaN	NaN	0	NaN	279	2105	2381
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2387	11.538	NaN	1276.3	30	0	331.07	0.035			+	21117	KKRTTKEK	8	39	509.8214791915357	1017.6284054498714	2	509.7987365722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KKRTTKEK_	REV__ENSG00000224389|ENST00000435363|C4B;REV__ENSG00000244731|ENST00000428956|C4A;REV__ENST00000460841.1_1_6:31959958-31961603:+|nuORF;REV__nc|ENSG00000244731|P0C0L4-2|C4A	23.04248740728303	0.7814162927298575	4				NaN	NaN	0	NaN	280	2105	2381
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2399	11.563	NaN	6008.4	30	0	824.04	0.214	+			44823	TTSRTSWE	8	59	484.227377295688	966.440201658176	2	484.2283020019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTSRTSWE_	TAX1BP1|p.T157Nfs*34|1|0.64|ENSG00000106052|chr7:27769687-27769688|-/A|frameshift_variant	51.33545320467046	0.5859736979383976	4				NaN	NaN	0	NaN	289	2108	2398
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2400	11.567	NaN	1536.3	30	0	538	0.106	+			33565	RLGERQIPAG	10	35	548.8157432784628	NaN	0	548.81591796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RLGERQIPAG_	ENSG00000015532|ENST00000017003|XYLT2;nc|ENSG00000015532|Q9H1B5-2|XYLT2;XYLT2|p.G529Afs*78|21|0.31|ENSG00000015532|chr17:50356606-50356606|C/-|frameshift_variant	25.57405402267927	0.4162033004763879	4				NaN	NaN	0	NaN	290	2108	2398
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2401	11.569	NaN	3198.5	30	0	537.71	0.106	+			41860	SVTGHTSQK	9	52	472.74298635161523	943.4714197700305	2	472.74365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVTGHTSQK_	BIRC6|p.A1071Lfs*23|1|0.39|ENSG00000115760|chr2:32431053-32431053|G/-|frameshift_variant;BIRC6|p.I2261Yfs*13|1|0.3|ENSG00000115760|chr2:32476268-32476268|A/-|frameshift_variant;BIRC6|p.I914Yfs*2|1|0.07|ENSG00000115760|chr2:32416027-32416027|A/-|frameshift_variant;BIRC6|p.K3585Sfs*8|1|0.32|ENSG00000115760|chr2:32515171-32515171|A/-|frameshift_variant;BIRC6|p.P1736Qfs*17|1|0.37|ENSG00000115760|chr2:32464770-32464770|C/-|frameshift_variant;BIRC6|p.R1406Dfs*3|1|0.35|ENSG00000115760|chr2:32442431-32442431|C/-|frameshift_variant;BIRC6|p.S2648Ffs*25|1|0.08|ENSG00000115760|chr2:32487769-32487770|-/T|frameshift_variant;BIRC6|p.S3504Mfs*5|1|0.15|ENSG00000115760|chr2:32513095-32513098|TAGT/-|frameshift_variant;BIRC6|p.T1339Qfs*21|1|0.44|ENSG00000115760|chr2:32442131-32442131|A/-|frameshift_variant;ENSG00000115760|ENST00000421745|BIRC6	95.81516180277367	0.04847050768394289	4				NaN	NaN	0	NaN	291	2108	2398
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2402	11.571	NaN	5190.6	30	0	914.14	0.106			+	31785	QPLIPTVSP	9	56	476.281159535652	950.5477661381041	2	476.7839660644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QPLIPTVSP_	REV__CGB5|p.D159V|1|0.07|ENSG00000196337|chr19:49045272-49045272|A/T|missense_variant	79.45101966838831	0.09992237243120712	4				NaN	NaN	0	NaN	292	2108	2398
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2403	11.572	NaN	1545.2	30	0	427.24	0.036			+	44718	TTLIQELIT	9	27	344.5368488447338	NaN	0	344.5368957519531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TTLIQELIT_	REV__HERV35I-int_dup77|chr3:106541134-106546233:+|1.3860853119714591|0.1976016791882729|2.81|468.0|325|3|anti-sense	26.69291269510374	0.34280015626154364	4				NaN	NaN	0	NaN	293	2108	2398
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2415	11.598	NaN	4907	30	0	1023.5	0.214	+			10715	FAAYLGAALA	10	35	484.26594694683774	966.5173409604755	2	484.2660217285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FAAYLGAALA_	ENSG00000132874|ENST00000255226|SLC14A2;nc|ENSG00000132874|Q15849-2|SLC14A2	19.359975847455235	0.718073418909716	4				NaN	NaN	0	NaN	302	2111	2414
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2416	11.602	NaN	26869	30	0	18805	0.106	+			4844	ATPKKSIKK	9	49	500.8287210213876	999.6428891095752	2	500.8294372558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATPKKSIKK_	ENSG00000124575|ENST00000244534|H1-3	106.68306549817024	0.032382560583716295	4				NaN	NaN	0	NaN	303	2111	2414
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2417	11.603	NaN	2199.2	30	0	931.1	0.106	+			30511	QAFLLPPVF	9	35	516.3019019289981	1030.589250924796	2	516.302001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QAFLLPPVF_	ENSG00000142166|ENST00000270139|IFNAR1;nc|ENSG00000142166|P17181-2|IFNAR1;nc|ENSG00000142166|P17181-3|IFNAR1;nc|ENSG00000142166|P17181-4|IFNAR1	26.69291269510374	0.5537881896960711	4				NaN	NaN	0	NaN	304	2111	2414
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2418	11.605	NaN	998.57	30	0	87.109	0.035	+			31210	QGRSEGEGKP	10	49	522.756847333113	1043.499141733026	2	522.7569580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QGRSEGEGKP_	ENSG00000196507|ENST00000372627|TCEAL3	51.52775601994872	0.4429225830406686	4				NaN	NaN	0	NaN	305	2111	2414
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2429	11.63	NaN	144630	30	0	85720	0.214				-1	 	0	75	334.2213304332296	999.6421618998888	3	334.2218322753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	313	2114	2428
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2430	11.634	NaN	30275	30	0	8462.2	0.106				-1	 	0	80	328.21787920135006	981.6318082042502	3	328.2184143066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	314	2114	2428
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2431	11.636	NaN	10213	30	0	1210.8	0.106				-1	 	0	61	549.7891759146931	1097.5637988961862	2	549.7900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	315	2114	2428
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2432	11.638	NaN	9793.6	30	0	4777.3	0.106				-1	 	0	55	511.8196019118623	1021.6246508905247	2	511.8204345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	316	2114	2428
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2433	11.64	NaN	1058.2	30	0	95.756	0.106			+	31276	QHWATGSLQ	9	27	514.2527465820312	NaN	0	514.2527465820312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QHWATGSLQ_	REV__ENST00000373703.4_1_1:32095783-32096005:-|nuORF	18.324413293986947	0.3749620627292244	4				NaN	NaN	0	NaN	317	2114	2428
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2434	11.641	NaN	5852.9	30	0	2196.3	0.106			+	-1	LLCARLHR	8	37	519.8040837962764	NaN	0	519.8033447265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_LLC(Carbamidomethyl (C))ARLHR_	REV__ENSG00000213246|ENST00000225504|SUPT4H1;REV__ENST00000577396.5_1_17:56428865-56429553:-|nuORF	13.775330524044264	1.7418937515398478	4				NaN	NaN	0	NaN	318	2114	2428
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2435	11.643	NaN	2814.4	30	0	983.44	0.036			+	50131	WICRKRKK	8	43	559.3432085475697	1116.6718641619393	2	559.343994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_WICRKRKK_	REV__ENSG00000135899|ENST00000258381|SP110;REV__ENST00000486146.2_1_2:231068050-231077551:-|nuORF;REV__ENST00000490880.5_1_2:231065532-231076254:-|nuORF;REV__nc|ENSG00000135899|Q9HB58-2|SP110;REV__nc|ENSG00000135899|Q9HB58-3|SP110;REV__nc|ENSG00000135899|Q9HB58-4|SP110;REV__nc|ENSG00000135899|Q9HB58-5|SP110;REV__nc|ENSG00000135899|Q9HB58-7|SP110;REV__nc|ENSG00000135899|Q9HB58|SP110	17.364965105453717	0.7956685240855921	4				NaN	NaN	0	NaN	319	2114	2428
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2449	11.673	NaN	10798	30	0	3077.5	0.214	+			37120	SITAKAKK	8	54	423.77333842673204	845.5321239202641	2	423.7737731933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SITAKAKK_	ENSG00000173692|ENST00000308696|PSMD1;nc|ENSG00000173692|Q99460-2|PSMD1;PSMD1|p.K849Rfs*44|1|0.38|ENSG00000173692|chr2:231165258-231165258|A/-|frameshift_variant	87.75429964447693	0.2842685068779738	4				NaN	NaN	0	NaN	330	2117	2448
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2450	11.677	NaN	36394	30	0	6316.8	0.106	+			42887	TEHAKRKTV	9	82	535.3087302890203	1068.6029076448406	2	535.309814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEHAKRKTV_	ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000275663|ENST00000611444|H4C7;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2	117.81106730687013	0.02252488733980868	4				NaN	NaN	0	NaN	331	2117	2448
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2451	11.679	NaN	1848.7	30	0	538.58	0.106			+	1597	AGLKLAKK	8	41	414.7866516113281	NaN	0	414.7866516113281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AGLKLAKK_	REV__ASS1|p.Q138Rfs*2|2|0.18|ENSG00000130707|chr9:130464154-130464154|C/-|frameshift_variant;REV__ENSG00000130707|ENST00000352480|ASS1	33.51558372728122	1.7418937515398478	4				NaN	NaN	0	NaN	332	2117	2448
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2452	11.68	NaN	941.51	30	0	78.196	0.106				-1	MCVFLSEQ	8	35	507.2269287109375	NaN	0	507.2269287109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_MC(Carbamidomethyl (C))VFLSEQ_	ENST00000361887.5_2_X:152157706-152158048:-|nuORF	31.954861631926434	1.7418937515398478	4				NaN	NaN	0	NaN	333	2117	2448
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2453	11.682	NaN	1139.3	30	0	317.77	0.106			+	33476	RIVPIKVTG	9	37	491.8228454589844	NaN	0	491.8228454589844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RIVPIKVTG_	REV__ENSG00000138759|ENST00000512123|FRAS1;REV__FRAS1|p.C3202Afs*11|1|0.32|ENSG00000138759|chr4:78508825-78508825|C/-|frameshift_variant;REV__FRAS1|p.G3456Afs*3|1|0.28|ENSG00000138759|chr4:78515987-78515987|G/-|frameshift_variant;REV__FRAS1|p.P3289Lfs*45|1|0.05|ENSG00000138759|chr4:78511358-78511359|-/T|frameshift_variant;REV__nc|ENSG00000138759|Q86XX4|FRAS1	16.473147378115264	0.38122769658151995	4				NaN	NaN	0	NaN	334	2117	2448
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2454	11.684	NaN	1431.1	30	0	583.96	0.036				-1	EKCRSRTK	8	29	532.7868041992188	NaN	0	532.7868041992188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_EKC(Carbamidomethyl (C))RSRTK_	DGKD|p.G855Vfs*48|1|0.29|ENSG00000077044|chr2:233457306-233457306|G/-|frameshift_variant;ENSG00000077044|ENST00000264057|DGKD;ENSG00000102780|ENST00000337343|DGKH;ENST00000490764.5_1_2:234327938-234366271:+|nuORF;nc|ENSG00000077044|Q16760-2|DGKD;nc|ENSG00000102780|Q86XP1-2|DGKH;nc|ENSG00000102780|Q86XP1-3|DGKH;nc|ENSG00000102780|Q86XP1-5|DGKH	42.396135135203025	1.7418937515398478	4				NaN	NaN	0	NaN	335	2117	2448
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2455	11.685	NaN	1772.9	30	0	511.98	0.139			+	29681	PGRVVKAG	8	32	392.2449453481278	782.4753377630557	2	392.2451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PGRVVKAG_	REV__ENSG00000197530|ENST00000355826|MIB2;REV__ENST00000507229.5_1_1:1551767-1563881:+|nuORF;REV__ENST00000511502.5_1_1:1550926-1563560:+|nuORF;REV__MIB2|p.D840Tfs*22|1|0.39|ENSG00000197530|chr1:1628687-1628687|G/-|frameshift_variant;REV__nc|ENSG00000197530|Q96AX9-10|MIB2;REV__nc|ENSG00000197530|Q96AX9-3|MIB2;REV__nc|ENSG00000197530|Q96AX9-4|MIB2;REV__nc|ENSG00000197530|Q96AX9-5|MIB2;REV__nc|ENSG00000197530|Q96AX9-6|MIB2;REV__nc|ENSG00000197530|Q96AX9-7|MIB2;REV__nc|ENSG00000197530|Q96AX9-8|MIB2;REV__nc|ENSG00000197530|Q96AX9-9|MIB2	44.53106598305862	0.628196326904373	4				NaN	NaN	0	NaN	336	2117	2448
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2469	11.716	NaN	12045	30	0	2307.2	0.214	+			14737	GTKAQVERK	9	66	508.7959289550781	NaN	0	508.7959289550781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTKAQVERK_	ENSG00000158769|ENST00000368026|F11R;ENST00000335772.3_1_1:160972398-160990872:-|nuORF;ENST00000602966.1_1_1:160970859-160990872:-|nuORF;nc|ENSG00000158769|Q9Y624-2|F11R	96.66504779109242	0.02816047575905831	4				NaN	NaN	0	NaN	347	2120	2468
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2470	11.719	NaN	3287.7	30	0	657.91	0.106	+			10541	EWWHEAQK	8	52	557.2593383362647	NaN	0	557.2591552734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EWWHEAQK_	ENSG00000134899|ENST00000652225|ERCC5;nc|ENSG00000134899|P28715-2|ERCC5	90.77665401227738	1.7418937515398478	4				NaN	NaN	0	NaN	348	2120	2468
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2471	11.721	NaN	599.82	30	0	102.4	0.106	+			46642	VGCWKNLID	9	35	524.2705078125	NaN	0	524.2705078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VGCWKNLID_	ARFGEF3|p.E1064Sfs*10|1|0.29|ENSG00000112379|chr6:138291869-138291869|C/-|frameshift_variant;ARFGEF3|p.F1125*|1|0.07|ENSG00000112379|chr6:138293997-138293998|TT/-|frameshift_variant;ENSG00000112379|ENST00000251691|ARFGEF3	24.20275056022122	0.35506675290109213	4				NaN	NaN	0	NaN	349	2120	2468
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2472	11.723	NaN	580.96	30	0	170.68	0.106				-1	SLGLALALCL	10	20	515.8037719726562	NaN	0	515.8037719726562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_SLGLALALC(Carbamidomethyl (C))L_	ENSG00000250722|ENST00000514985|SELENOP;ENST00000505309.1_1_5:42808281-42808491:-|nuORF;ENST00000510965.1_1_5:42808281-42811941:-|nuORF;ENST00000514218.5_3_5:42808281-42887487:-|nuORF	10.865556482863946	0.4201028297492154	4				NaN	NaN	0	NaN	350	2120	2468
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2473	11.725	NaN	1568.3	30	0	233.69	0.106	+			19830	KEDSKKTK	8	49	482.2764716184849	962.5383903037698	2	482.2769775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEDSKKTK_	ENSG00000186439|ENST00000334268|TRDN;TRDN|p.E519Gfs*9|1|0.07|ENSG00000186439|chr6:123278331-123278332|-/T|frameshift_variant;TRDN|p.E606Sfs*14|1|0.05|ENSG00000186439|chr6:123260627-123260628|-/CCAAAAGGCT|frameshift_variant;TRDN|p.P386Tfs*34|1|0.13|ENSG00000186439|chr6:123382127-123382128|-/T|frameshift_variant;TRDN|p.T573Nfs*11|1|0.39|ENSG00000186439|chr6:123271141-123271142|-/T|frameshift_variant;TRDN|p.V538Cfs*8|1|0.28|ENSG00000186439|chr6:123273350-123273350|T/-|frameshift_variant	39.252832667884924	0.6609488554722044	4				NaN	NaN	0	NaN	351	2120	2468
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2474	11.727	NaN	298.13	30	0	68.994	0.035	+			9289	EHMNHKLV	8	21	504.2594909667969	NaN	0	504.2594909667969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EHMNHKLV_	APOB|p.A2932Pfs*19|1|0.36|ENSG00000084674|chr2:21008074-21008074|C/-|frameshift_variant	14.864876125193954	1.7418937515398478	4				NaN	NaN	0	NaN	352	2120	2468
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2475	11.727	NaN	12096	30	0	1411.3	0.139	+			40291	STSSKSPPR	9	69	473.75082270962366	945.4870924860473	2	473.7509460449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STSSKSPPR_	ENSG00000263001|ENST00000573035|GTF2I;ENST00000544802.5_1_7:72593260-72619478:+|nuORF;nc|ENSG00000263001|P78347-2|GTF2I;nc|ENSG00000263001|P78347-3|GTF2I;nc|ENSG00000263001|P78347-4|GTF2I	82.7504851949679	0.08565546331141553	4				NaN	NaN	0	NaN	353	2120	2468
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2486	11.754	NaN	13249	30	0	1699.8	0.215	+			40322	STSTSSMKK	9	73	478.7388258357647	955.4630987383294	2	478.7391662597656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STSTSSMKK_	ENSG00000047849|ENST00000683076|MAP4;MAP4|p.R919Gfs*14|1|0.44|ENSG00000047849|chr3:47870917-47870917|G/-|frameshift_variant;MAP4|p.T960Qfs*35|1|0.3|ENSG00000047849|chr3:47869309-47869309|T/-|frameshift_variant;MAP4|p.V999*|1|0.25|ENSG00000047849|chr3:47867318-47867318|T/-|frameshift_variant;nc|ENSG00000047849|P27816-2|MAP4;nc|ENSG00000047849|P27816-4|MAP4;nc|ENSG00000047849|P27816-5|MAP4;nc|ENSG00000047849|P27816-6|MAP4;nc|ENSG00000047849|P27816|MAP4	104.0567914643314	0.03506238181059741	4				NaN	NaN	0	NaN	361	2123	2485
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2487	11.758	NaN	1999.8	30	0	692.71	0.034	+			20358	KESKDTKK	8	48	482.2764716184849	962.5383903037698	2	482.259033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KESKDTKK_	ENSG00000137776|ENST00000380516|SLTM;nc|ENSG00000137776|Q9NWH9-3|SLTM	47.657333605630114	0.6087971902037268	4				NaN	NaN	0	NaN	362	2123	2485
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2496	11.78	NaN	5505.8	30	0	1864.7	0.214			+	21100	KKQRTERE	8	51	537.8037290400457	1073.5929051468913	2	537.80419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KKQRTERE_	REV__ENSG00000211455|ENST00000389032|STK38L;REV__STK38L|p.F383Lfs*9|1|0.1|ENSG00000211455|chr12:27319392-27319392|T/-|frameshift_variant	47.657333605630114	0.6087971902037268	4				NaN	NaN	0	NaN	368	2126	2495
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2497	11.783	NaN	3297.8	30	0	686.77	0.106	+			3972	ATATPSKTR	9	47	466.7621271815276	931.5097014298552	2	466.7611389160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATATPSKTR_	ENSG00000117983|ENST00000529681|MUC5B;ENSG00000117983|ENST00000529681|MUC5B;ENSG00000117983|ENST00000529681|MUC5B;ENSG00000117983|ENST00000529681|MUC5B;MUC5B|p.E2447Vfs*233|1|0.15|ENSG00000117983|chr11:1244218-1244219|TG/-|frameshift_variant;MUC5B|p.E2929Gfs*98|1|0.13|ENSG00000117983|chr11:1245660-1245661|-/GC|frameshift_variant;MUC5B|p.E2929Gfs*98|1|0.13|ENSG00000117983|chr11:1245660-1245661|-/GC|frameshift_variant;MUC5B|p.P2717Qfs*3|2|0.21|ENSG00000117983|chr11:1245025-1245025|C/-|frameshift_variant;MUC5B|p.P3417Qfs*3|1|0.41|ENSG00000117983|chr11:1247125-1247125|C/-|frameshift_variant;MUC5B|p.P3417Qfs*3|1|0.41|ENSG00000117983|chr11:1247125-1247125|C/-|frameshift_variant;MUC5B|p.S3126Pfs*13|1|0.37|ENSG00000117983|chr11:1246251-1246251|C/-|frameshift_variant;MUC5B|p.S3126Pfs*13|1|0.37|ENSG00000117983|chr11:1246251-1246251|C/-|frameshift_variant;MUC5B|p.S3878Pfs*27|1|0.13|ENSG00000117983|chr11:1248507-1248507|C/-|frameshift_variant;MUC5B|p.S3878Pfs*27|1|0.13|ENSG00000117983|chr11:1248507-1248507|C/-|frameshift_variant;MUC5B|p.S3878Pfs*27|1|0.13|ENSG00000117983|chr11:1248507-1248507|C/-|frameshift_variant;MUC5B|p.S4017Lfs*56|1|0.22|ENSG00000117983|chr11:1248928-1248929|-/C|frameshift_variant;MUC5B|p.S4017Lfs*56|1|0.22|ENSG00000117983|chr11:1248928-1248929|-/C|frameshift_variant;MUC5B|p.S4017Lfs*56|1|0.22|ENSG00000117983|chr11:1248928-1248929|-/C|frameshift_variant;MUC5B|p.T4706Pfs*4|2|0.37|ENSG00000117983|chr11:1250996-1250996|A/-|frameshift_variant;MUC5B|p.T4706Pfs*4|2|0.37|ENSG00000117983|chr11:1250996-1250996|A/-|frameshift_variant;MUC5B|p.T4706Pfs*4|2|0.37|ENSG00000117983|chr11:1250996-1250996|A/-|frameshift_variant;MUC5B|p.T4706Pfs*4|2|0.37|ENSG00000117983|chr11:1250996-1250996|A/-|frameshift_variant	65.46538089061403	0.16805504838372562	4				NaN	NaN	0	NaN	369	2126	2495
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2498	11.785	NaN	902.94	30	0	128.23	0.106			+	31119	QFVNEGDAV	9	36	489.7299236099353	977.4452942866707	2	489.73028564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QFVNEGDAV_	REV__GON4L|p.A1241V|1|0.39|ENSG00000116580|chr1:155765751-155765751|G/A|missense_variant	29.14955571784316	0.5308295550522326	4				NaN	NaN	0	NaN	370	2126	2495
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2499	11.787	NaN	2215	30	0	662.04	0.106	+			8560	EAVVNAVFI	9	25	481.26939938557933	960.5242458379587	2	481.2688903808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EAVVNAVFI_	ENSG00000197603|ENST00000651892|CPLANE1;nc|ENSG00000197603|Q9H799-5|CPLANE1;nc|ENSG00000197603|Q9H799|CPLANE1	11.511019455917149	0.6112419832031292	4				NaN	NaN	0	NaN	371	2126	2495
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2500	11.789	NaN	2649.3	30	0	1128.6	0.106	+			42259	TAARSECKR	9	39	511.26314477658264	1020.5117366199653	2	511.765380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TAARSECKR_	ENSG00000180644|ENST00000441259|PRF1;PRF1|p.D430Tfs*10|1|0.24|ENSG00000180644|chr10:70598433-70598433|C/-|frameshift_variant;PRF1|p.L478*|1|0.29|ENSG00000180644|chr10:70598293-70598293|C/-|frameshift_variant	19.996771675451527	0.6112419832031292	4				NaN	NaN	0	NaN	372	2126	2495
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2501	11.79	NaN	1234.5	30	0	255.72	0.034	+			19440	KAQTKAPPK	9	41	484.7973776855092	967.5802024378185	2	484.79766845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KAQTKAPPK_	ENSG00000166197|ENST00000605788|NOLC1;nc|ENSG00000166197|Q14978-2|NOLC1;nc|ENSG00000166197|Q14978-3|NOLC1	41.42661286455405	0.403525789677298	4				NaN	NaN	0	NaN	373	2126	2495
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2510	11.812	NaN	5238.7	30	0	1214.7	0.144	+			21150	KKTKTKQQQ	9	52	559.3376125129741	1116.6606720927482	2	559.3381958007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KKTKTKQQQ_	ENST00000455332.6_1_11:119227426-119227513:-|nuORF	82.7504851949679	0.08565546331141553	4				NaN	NaN	0	NaN	379	2129	2509
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2522	11.84	NaN	170820	30	0	49187	0.214	+			3504	ASSKDAIKK	9	116	474.2790312021183	946.5435094710366	2	474.2793273925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASSKDAIKK_	DSTN|p.Y117H|1|0.26|ENSG00000125868|chr20:17604592-17604592|T/C|missense_variant;ENSG00000125868|ENST00000246069|DSTN;ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000400899.2_1_1:11051144-11051557:-|nuORF;ENST00000530945.1_1_11:65623104-65623215:-|nuORF;nc|ENSG00000125868|P60981-2|DSTN;nc|ENSG00000165410|Q9Y281-3|CFL2	112.10723106719422	0.02684780151337622	4				NaN	NaN	0	NaN	388	2132	2521
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2523	11.843	NaN	18838	30	0	3985	0.106	+			14807	GTLERSKNK	9	72	516.7930614985971	1031.5715700639942	2	516.793701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTLERSKNK_	ENSG00000221963|ENST00000409652|APOL6	101.25262130126117	0.03792372629710479	4				NaN	NaN	0	NaN	389	2132	2521
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2524	11.845	NaN	5409.2	30	0	1598.7	0.106				-1	 	0	39	344.8643268348067	1031.5711511046202	3	344.86468505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	390	2132	2521
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2525	11.847	NaN	568.19	30	0	110.82	0.106			+	20555	KFQQSEQVL	9	29	553.7935791015625	NaN	0	553.7935791015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KFQQSEQVL_	REV__ENSG00000149639|ENST00000237536|SOGA1;REV__nc|ENSG00000149639|O94964-1|MTCL2;REV__nc|ENSG00000149639|O94964-4|MTCL2;REV__SOGA1|p.D1221Gfs*26|1|0.3|ENSG00000149639|chr20:36794420-36794421|-/C|frameshift_variant	34.172542307311794	0.30503706118289736	4				NaN	NaN	0	NaN	391	2132	2521
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2526	11.849	NaN	2071.3	30	0	1264.5	0.106				-1	AAMPCFVII	9	27	341.17789464668573	1020.5118545402572	3	341.17822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_AAMPC(Carbamidomethyl (C))FVII_	ENSG00000204516|ENST00000252229|MICB;nc|ENSG00000204516|Q29980-2|MICB	29.14955571784316	0.5308295550522326	4				NaN	NaN	0	NaN	392	2132	2521
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2527	11.851	NaN	1238.1	30	0	188.61	0.037			+	19505	KATTQNILNK	10	38	565.8292663974811	1129.643979861762	2	565.8305053710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KATTQNILNK_	REV__ARFGEF1|p.F1680Lfs*8|1|0.29|ENSG00000066777|chr8:67203171-67203171|A/-|frameshift_variant;REV__ARFGEF1|p.F501Lfs*19|1|0.46|ENSG00000066777|chr8:67271771-67271771|A/-|frameshift_variant;REV__ARFGEF1|p.G612Vfs*2|1|0.33|ENSG00000066777|chr8:67266964-67266964|T/-|frameshift_variant;REV__ARFGEF1|p.K888Rfs*10|1|0.36|ENSG00000066777|chr8:67253485-67253486|TT/-|frameshift_variant;REV__ARFGEF2|p.Q1130Hfs*19|1|0.05|ENSG00000124198|chr20:48998462-48998463|-/CAAGCAAAGCCTC|frameshift_variant;REV__ENSG00000066777|ENST00000262215|ARFGEF1;REV__ENSG00000124198|ENST00000371917|ARFGEF2	16.006774744331256	0.7351120747673535	4				NaN	NaN	0	NaN	393	2132	2521
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2528	11.851	NaN	590.06	30	0	120.38	0.141	+			27479	MLTRWRHP	8	19	548.7955932617188	NaN	0	548.7955932617188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MLTRWRHP_	ENST00000540986.5_1_16:786364-787196:-|nuORF	13.775330524044264	1.7418937515398478	4				NaN	NaN	0	NaN	394	2132	2521
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2540	11.878	NaN	70643	30	0	21962	0.214				-1	 	0	90	485.2701690673419	968.5257852014838	2	485.2707214355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	403	2135	2539
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2541	11.881	NaN	172260	30	0	84986	0.106				-1	 	0	128	334.8849200795191	1001.6329308387573	3	334.8855285644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	404	2135	2539
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2542	11.883	NaN	92635	30	0	16614	0.106			+	21104	KKQTNKKK	8	82	501.8240002306335	1001.633447528067	2	501.8249206542969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KKQTNKKK_	REV__ENST00000395442.5_1_10:55568369-55568990:-|nuORF	143.8867514904718	0.2724165679903577	4				NaN	NaN	0	NaN	405	2135	2539
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2543	11.885	NaN	41430	30	0	16241	0.106	+			28236	NCRSHLKQ	8	60	493.254277865588	984.494002797976	2	493.25421142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NCRSHLKQ_	ENSG00000197714|ENST00000360338|ZNF460;nc|ENSG00000197714|Q14592-2|ZNF460;ZNF460|p.Y476Mfs*57|1|0.28|ENSG00000197714|chr19:57291964-57291964|C/-|frameshift_variant;ZNF543|p.R406C|1|0.07|ENSG00000178229|chr19:57328678-57328678|C/T|missense_variant	51.33545320467046	0.5859736979383976	4				NaN	NaN	0	NaN	406	2135	2539
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2544	11.887	NaN	33664	30	0	5844.3	0.106			+	-1	QDKAAAQCGP	10	69	523.2396308808374	1044.4647088284746	2	523.2405395507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_QDKAAAQC(Carbamidomethyl (C))GP_	REV__ENST00000502380.1_1_5:176936187-176937359:-|nuORF;REV__ENST00000512660.1_1_5:176936187-176936779:-|nuORF	40.77816245573522	0.5419747034533848	4				NaN	NaN	0	NaN	407	2135	2539
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2545	11.889	NaN	58199	30	0	13729	0.106				-1	 	0	90	438.7605383916695	875.506523850139	2	438.7610168457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	408	2135	2539
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2546	11.891	NaN	15761	30	0	4282.3	0.034	+			48068	VSSPSKSKK	9	77	474.2790312021183	946.5435094710366	2	476.7688903808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VSSPSKSKK_	ENSG00000164164|ENST00000447906|OTUD4;ENST00000237841.5_1_12:3949907-3950609:+|nuORF;ENST00000455611.6_1_4:146049153-146095893:-|nuORF;nc|ENSG00000164164|Q01804-3|OTUD4;nc|ENSG00000164164|Q01804-5|OTUD4	49.44154591367651	0.3095138337212152	4				NaN	NaN	0	NaN	409	2135	2539
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2585	11.977	NaN	24038	30	0	6399.8	0.14			+	22213	KSTVVKAG	8	71	395.24497663620554	788.4754003392111	2	395.2449035644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSTVVKAG_	REV__ENST00000569494.5_3_16:57679871-57684200:+|nuORF	102.7733458925114	0.2491487235419157	4				NaN	NaN	0	NaN	439	2144	2584
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2596	12.002	NaN	345930	30	0	48900	0.147	+			43517	TGSRSVVQAG	10	93	481.2559573130244	960.4973616928488	2	481.256591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TGSRSVVQAG_	ENST00000496525.1_1_13:20244500-20245123:+|nuORF;nc|ENSG00000196199|Q99549-2|MPHOSPH8	124.08010499294276	0.021567188538240013	4				NaN	NaN	0	NaN	447	2147	2595
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2597	12.005	NaN	96870	30	0	37722	0.106	+			34936	SAAKAVKPK	9	88	450.2869433387148	898.5593337442297	2	450.2874450683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAAKAVKPK_	ENSG00000187837|ENST00000343677|H1-2	96.0336014099291	0.047854655524928534	4				NaN	NaN	0	NaN	448	2147	2595
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2598	12.007	NaN	59798	30	0	10419	0.106				-1	CQSYDMKQ	8	55	530.217259796422	NaN	0	530.2176513671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_C(Carbamidomethyl (C))QSYDMKQ_	ENSG00000061987|ENST00000393630|MON2;ENST00000547095.5_1_12:62864501-62986526:+|nuORF;MON2|p.A1027Vfs*94|1|0.03|ENSG00000061987|chr12:62553043-62553044|-/TTCTTTTT|frameshift_variant;MON2|p.E989Nfs*2|1|0.16|ENSG00000061987|chr12:62552924-62552924|A/-|frameshift_variant;MON2|p.T1274Qfs*3|1|0.36|ENSG00000061987|chr12:62560894-62560894|T/-|frameshift_variant;MON2|p.V1435Afs*17|1|0.03|ENSG00000061987|chr12:62566430-62566431|-/CATCT|frameshift_variant;nc|ENSG00000061987|Q7Z3U7-2|MON2;nc|ENSG00000061987|Q7Z3U7-5|MON2;nc|ENSG00000061987|Q7Z3U7-6|MON2	42.396135135203025	1.7418937515398478	4				NaN	NaN	0	NaN	449	2147	2595
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2599	12.009	NaN	2504.9	30	0	399.88	0.106	+			22288	KTDNRPLKK	9	62	550.3324143287299	1098.6502757242597	2	550.3333740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTDNRPLKK_	BAZ2A|p.K1507Qfs*26|1|0.27|ENSG00000076108|chr12:56600770-56600771|-/G|frameshift_variant;BAZ2A|p.V772Sfs*9|1|0.34|ENSG00000076108|chr12:56606016-56606016|T/-|frameshift_variant;ENSG00000076108|ENST00000549884|BAZ2A;ENST00000549763.1_1_12:57000128-57003565:-|nuORF;nc|ENSG00000076108|Q9UIF9-2|BAZ2A;nc|ENSG00000076108|Q9UIF9-3|BAZ2A;nc|ENSG00000076108|Q9UIF9|BAZ2A	65.15724298150197	0.17062369902793603	4				NaN	NaN	0	NaN	450	2147	2595
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2600	12.01	NaN	3138.6	30	0	435.76	0.106				-1	EKPMTREN	8	44	510.7428037976749	NaN	0	510.7430725097656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_EKPM(Oxidation (M))TREN_	tr|U7SM61|U7SM61_FUSNUYhcH/YjgK/YiaLfamilyproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02093PE=4SV=1	29.14955571784316	1.7418937515398478	4				NaN	NaN	0	NaN	451	2147	2595
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2601	12.012	NaN	44515	30	0	28320	0.106			+	-1	ASGCQALKK	9	54	321.5072970094294	961.5000616284883	3	321.5080261230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_ASGC(Carbamidomethyl (C))QALKK_	REV__AluJb_dup115673|chr19:17814641-17814928:+|5.091546338129726|0.4649285931816585|3.45|481.0|11|3|sense	36.446750945000026	0.4619375763483977	4				NaN	NaN	0	NaN	452	2147	2595
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2602	12.014	NaN	9940	30	0	2053.7	0.032	+			129	AAGAGKVTK	9	63	401.742202922024	801.469852910848	2	401.7427062988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AAGAGKVTK_	ENSG00000156508|ENST00000309268|EEF1A1;ENST00000359165.5_1_12:19609181-19609565:-|nuORF;ENST00000436459.2_1_9:135895553-135896258:+|nuORF;ENST00000447052.1_1_21:24762753-24763314:+|nuORF;ENST00000547505.2_1_12:44054544-44054901:+|nuORF;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	101.25262130126117	0.03792372629710479	4				NaN	NaN	0	NaN	453	2147	2595
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2613	12.039	NaN	7174.7	30	0	2843.8	0.214			+	19706	KDSPYNLF	8	61	492.24737548828125	NaN	0	492.24737548828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KDSPYNLF_	REV__CCDC141|p.A1228Hfs*19|1|0.36|ENSG00000163492|chr2:178837541-178837541|A/-|frameshift_variant;REV__ENSG00000163492|ENST00000443758|CCDC141;REV__nc|ENSG00000163492|Q6ZP82-1|CCDC141	37.15910966729921	1.7418937515398478	4				NaN	NaN	0	NaN	461	2150	2612
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2614	12.043	NaN	45980	30	0	12956	0.106	+			14657	GTIAKSGTK	9	70	431.7530152010786	NaN	0	431.75299072265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTIAKSGTK_	ENSG00000080824|ENST00000216281|HSP90AA1;ENSG00000096384|ENST00000371646|HSP90AB1;HSP90AA1|p.K419Nfs*3|1|0.25|ENSG00000080824|chr14:102083874-102083874|T/-|frameshift_variant;HSP90AA1|p.S330Qfs*48|1|0.21|ENSG00000080824|chr14:102084558-102084558|A/-|frameshift_variant;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000224411|Q14568|HSP90AA2P	186.41076107051632	0.0018316092787035866	4				NaN	NaN	0	NaN	462	2150	2612
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2615	12.045	NaN	2612.1	30	0	395.46	0.106				-1	MCARDAEMP	9	23	541.2083129882812	NaN	0	541.2083129882812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))M(Oxidation (M))CARDAEMP_	ENST00000284856.3_1_Y:15815597-15815699:+|nuORF	12.206847966760668	0.39566704307768535	4				NaN	NaN	0	NaN	463	2150	2612
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2616	12.046	NaN	10498	30	0	1777	0.106				-1	PCQGAGVKK	9	71	315.5042724609375	NaN	0	315.5042724609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_PC(Carbamidomethyl (C))QGAGVKK_	ENST00000529983.2_1_12:89918135-89918465:-|nuORF	45.97224482568171	0.23445038899310136	4				NaN	NaN	0	NaN	464	2150	2612
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2617	12.048	NaN	1269.4	30	0	249.53	0.106				-1	HACFCQKQ	8	31	511.22149658203125	NaN	0	511.22149658203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_HACFC(Carbamidomethyl (C))QKQ_	ENSG00000108423|ENST00000325752|TUBD1;ENST00000591611.5_1_17:57955667-57970063:-|nuORF;nc|ENSG00000108423|Q9UJT1-2|TUBD1;nc|ENSG00000108423|Q9UJT1-5|TUBD1;nc|ENSG00000108423|Q9UJT1-6|TUBD1	13.775330524044264	1.7418937515398478	4				NaN	NaN	0	NaN	465	2150	2612
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2618	12.05	NaN	11194	30	0	2926.3	0.036	+			38996	SSSEYTHHK	9	80	538.2431770140948	1074.4718010949896	2	538.244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSSEYTHHK_	ENSG00000153922|ENST00000614616|CHD1;nc|ENSG00000153922|O14646-2|CHD1	134.81075121484326	0.012914550297035062	4				NaN	NaN	0	NaN	466	2150	2612
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2619	12.051	NaN	1667.1	30	0	366.35	0.143			+	4820	ATNVSPEKAP	10	43	338.5150146484375	NaN	0	338.5150146484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATNVSPEKAP_	REV__ENSG00000151623|ENST00000358102|NR3C2;REV__ENST00000503313.1_1_4:149067883-149122244:-|nuORF;REV__nc|ENSG00000151623|P08235-3|NR3C2;REV__NR3C2|p.A712T|1|0.36|ENSG00000151623|chr4:148154782-148154782|C/T|missense_variant;REV__NR3C2|p.L875Cfs*4|1|0.38|ENSG00000151623|chr4:148120175-148120175|A/-|frameshift_variant	20.94693142431847	0.4201028297492154	4				NaN	NaN	0	NaN	467	2150	2612
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2630	12.078	NaN	5112.4	30	0	776.32	0.214	+			20049	KEKDKDSKL	9	60	545.8080406825625	1089.6015284319249	2	545.8091430664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEKDKDSKL_	ENSG00000143799|ENST00000366794|PARP1;PARP1|p.E360Rfs*29|1|0.22|ENSG00000143799|chr1:226383118-226383119|-/G|frameshift_variant;PARP1|p.K352Nfs*29|1|0.12|ENSG00000143799|chr1:226383139-226383139|T/-|frameshift_variant;PARP1|p.S507Afs*17|2|0.28|ENSG00000143799|chr1:226379946-226379946|T/-|frameshift_variant;PARP1|p.T799Lfs*41|1|0.39|ENSG00000143799|chr1:226367491-226367491|T/-|frameshift_variant	101.45984612302182	0.0377122763612125	4				NaN	NaN	0	NaN	475	2153	2629
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2631	12.081	NaN	1233.2	30	0	186.5	0.106				-1	ENIMKKRG	8	43	496.27060383734823	990.5266547414965	2	497.2421569824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_ENIM(Oxidation (M))KKRG_	tr|U7SLX9|U7SLX9_FUSNUATPasedynein-relatedAAAdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01982PE=4SV=1	19.359975847455235	0.7988239741663654	4				NaN	NaN	0	NaN	476	2153	2629
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2632	12.083	NaN	5932.7	30	0	2127.9	0.106	+			15075	GTPRAAPKK	9	52	463.2818838561416	924.5492147790832	2	463.2820739746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTPRAAPKK_	ENSG00000146278|ENST00000336032|PNRC1;nc|ENSG00000146278|Q12796-2|PNRC1;PNRC1|p.K251Sfs*14|2|0.25|ENSG00000146278|chr6:89083958-89083958|A/-|frameshift_variant	49.44154591367651	0.3095138337212152	4				NaN	NaN	0	NaN	477	2153	2629
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2633	12.085	NaN	9469.5	30	0	1085.5	0.106	+			13036	GEVSHPRKT	9	74	505.77190427320954	1009.5292556132191	2	505.77252197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEVSHPRKT_	ENSG00000145192|ENST00000411641|AHSG	48.601550744091256	0.3193666407755445	4				NaN	NaN	0	NaN	478	2153	2629
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2634	12.087	NaN	1224	30	0	371.11	0.106			+	37607	SLPSLILNPC	10	29	352.8648376464844	NaN	0	352.8648376464844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SLPSLILNPC_	REV__ENSG00000167711|ENST00000453066|SERPINF2	28.081489160057373	0.40797012399963245	4				NaN	NaN	0	NaN	479	2153	2629
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2635	12.089	NaN	658.45	30	0	275.12	0.037	+			16916	HPLQFLRSV	9	26	366.2120361328125	NaN	0	366.2120361328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HPLQFLRSV_	ENST00000485029.5_1_3:47545746-47555080:-|nuORF	30.317721548370564	0.32449924987115025	4				NaN	NaN	0	NaN	480	2153	2629
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2636	12.089	NaN	9282.4	30	0	6126.3	0.139	+			30576	QANGPVAKK	9	51	456.76607165087887	911.5175903685578	2	456.76605224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QANGPVAKK_	ENSG00000166197|ENST00000605788|NOLC1;nc|ENSG00000166197|Q14978-2|NOLC1;nc|ENSG00000166197|Q14978-3|NOLC1	102.7733458925114	0.03637199559902695	4				NaN	NaN	0	NaN	481	2153	2629
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2650	12.12	NaN	2438.5	30	0	497.84	0.214	+			20546	KFMANIKK	8	53	490.29241943359375	NaN	0	490.29241943359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KFMANIKK_	tr|U7SWT0|U7SWT0_FUSNUDihydroorotatedehydrogenaseB(NAD(+)),electrontransfersubunitOS=FusobacteriumnucleatumCTI-5OX=1316586GN=pyrKPE=3SV=1	40.5726180659479	1.7418937515398478	4				NaN	NaN	0	NaN	492	2156	2649
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2651	12.124	NaN	11305	30	0	1407.9	0.106	+			38993	SSSEPVHAKK	10	78	535.2848081396692	1068.5550633461382	2	535.2863159179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSSEPVHAKK_	ENSG00000173145|ENST00000371361|NOC3L;NOC3L|p.K235Nfs*2|1|0.43|ENSG00000173145|chr10:94353049-94353049|T/-|frameshift_variant;NOC3L|p.L425Yfs*3|1|0.14|ENSG00000173145|chr10:94346540-94346540|A/-|frameshift_variant;NOC3L|p.T423Hfs*5|1|0.09|ENSG00000173145|chr10:94346547-94346547|T/-|frameshift_variant	144.76815839617436	0.009482796195788205	4				NaN	NaN	0	NaN	493	2156	2649
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2652	12.126	NaN	1632.3	30	0	343.62	0.106				-1	VGIHLLLLM	9	45	512.8132807861588	1023.6120086391176	2	512.8146362304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_VGIHLLLLM(Oxidation (M))_	ENSG00000226479|ENST00000426077|TMEM185B;ENSG00000269556|ENST00000600449|TMEM185A;ENST00000502900.2_1_X:148688442-148693021:-|nuORF;ENST00000517359.1_1_X:148690238-148690502:-|nuORF;TMEM185B|p.P341Lfs*4|3|0.55|ENSG00000226479|chr2:120221955-120221955|G/-|frameshift_variant	21.70233525837049	0.6004277881119521	4				NaN	NaN	0	NaN	494	2156	2649
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2653	12.128	NaN	661.47	30	0	145.1	0.106	+			24345	LFLHPPHM	8	27	496.26147750055054	990.5084020679011	2	496.2624206542969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LFLHPPHM_	ENST00000532315.1_1_11:121975901-121976138:-|nuORF	24.504012794735996	0.7701314986472447	4				NaN	NaN	0	NaN	495	2156	2649
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2654	12.13	NaN	813.04	30	0	110.51	0.106			+	8992	EFRQSVEAL	9	28	539.7786254882812	NaN	0	539.7786254882812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EFRQSVEAL_	REV__ENSG00000127603|ENST00000564288|MACF1;REV__ENST00000476350.1_1_1:39768622-39838291:+|nuORF;REV__MACF1|p.A5223Lfs*8|1|0.21|ENSG00000127603|chr1:39388486-39388486|G/-|frameshift_variant;REV__MACF1|p.N4824Kfs*19|1|0.33|ENSG00000127603|chr1:39387292-39387293|-/A|frameshift_variant;REV__MACF1|p.T4896Lfs*29|1|0.27|ENSG00000127603|chr1:39387507-39387507|A/-|frameshift_variant;REV__nc|ENSG00000127603|Q9UPN3-2|MACF1;REV__nc|ENSG00000127603|Q9UPN3-3|MACF1;REV__nc|ENSG00000127603|Q9UPN3-4|MACF1;REV__nc|ENSG00000127603|Q9UPN3-5|MACF1;REV__nc|ENSG00000127603|Q9UPN3|MACF1	24.20275056022122	0.35506675290109213	4				NaN	NaN	0	NaN	496	2156	2649
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2655	12.131	NaN	11448	30	0	2672.4	0.036			+	38442	SSALSFSRSK	10	53	357.19266464017085	NaN	0	357.19268798828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSALSFSRSK_	REV__ENSG00000144909|ENST00000296220|OSBPL11;REV__OSBPL11|p.F196Lfs*11|1|0.14|ENSG00000144909|chr3:125576267-125576267|A/-|frameshift_variant;REV__OSBPL11|p.N308Mfs*29|1|0.27|ENSG00000144909|chr3:125563789-125563789|T/-|frameshift_variant	40.05817265558897	0.3684561582319974	4				NaN	NaN	0	NaN	497	2156	2649
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2669	12.161	NaN	1660.7	30	0	354.93	0.214	+			20097	KEKKEEEKM	9	53	589.8074457635892	1177.6003385939782	2	589.8084106445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEKKEEEKM_	ENSG00000173692|ENST00000308696|PSMD1;nc|ENSG00000173692|Q99460-2|PSMD1	92.23892857375223	0.05855307001735979	4				NaN	NaN	0	NaN	508	2159	2668
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2670	12.165	NaN	3628.7	30	0	734.27	0.106	+			40263	STSPSQPRK	9	62	494.26397705078125	NaN	0	494.26397705078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STSPSQPRK_	CREBBP|p.Q2411Sfs*2|1|0.24|ENSG00000005339|chr16:3727816-3727816|G/-|frameshift_variant;ENSG00000005339|ENST00000262367|CREBBP;ENST00000573672.1_1_16:3817649-3820675:-|nuORF;nc|ENSG00000005339|Q92793-2|CREBBP	68.78682469695295	0.1118430353446351	4				NaN	NaN	0	NaN	509	2159	2668
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2671	12.167	NaN	8419.3	30	0	1414.8	0.106	+			22060	KSKNHKKTA	9	67	521.3111252679499	1040.6076976026998	2	521.3121337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KSKNHKKTA_	ENST00000565120.1_1_17:42015742-42016079:+|nuORF	72.87924865735499	0.12833875048249987	4				NaN	NaN	0	NaN	510	2159	2668
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2672	12.169	NaN	4513.5	30	0	678.07	0.106			+	30591	QAPTRFWW	8	65	546.2759485919107	1090.5373442506213	2	546.2770385742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QAPTRFWW_	REV__ENST00000481757.5_1_2:241513848-241514670:+|nuORF	50.0245360154114	0.5941082100236891	4				NaN	NaN	0	NaN	511	2159	2668
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2673	12.17	NaN	7168.8	30	0	1677.1	0.106	+			21766	KQQTIPLK	8	70	478.29993682430785	954.5853207154157	2	478.3001403808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KQQTIPLK_	ENSG00000152240|ENST00000282058|HAUS1;ENST00000439908.1_1_X:18884431-18884560:+|nuORF;nc|ENSG00000152240|Q96CS2-2|HAUS1	71.87747018426188	0.391254423828572	4				NaN	NaN	0	NaN	512	2159	2668
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2674	12.172	NaN	2537.3	30	0	528.9	0.036				-1	 	0	41	347.87633702342555	1040.6071816704766	3	347.8768615722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	513	2159	2668
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2675	12.173	NaN	809.2	30	0	165.49	0.142	+			2713	AQSLHREATK	10	39	570.8103637695312	NaN	0	570.8103637695312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AQSLHREATK_	ENSG00000035403|ENST00000211998|VCL;VCL|p.A969V|1|0.31|ENSG00000035403|chr10:74112069-74112069|C/T|missense_variant	43.41853373365257	0.34721146686759025	4				NaN	NaN	0	NaN	514	2159	2668
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2688	12.202	NaN	104090	30	0	33997	0.159	+			3505	ASSKDAIKK	9	90	474.2790312021183	946.5435094710366	2	474.279052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASSKDAIKK_	DSTN|p.Y117H|1|0.26|ENSG00000125868|chr20:17604592-17604592|T/C|missense_variant;ENSG00000125868|ENST00000246069|DSTN;ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000400899.2_1_1:11051144-11051557:-|nuORF;ENST00000530945.1_1_11:65623104-65623215:-|nuORF;nc|ENSG00000125868|P60981-2|DSTN;nc|ENSG00000165410|Q9Y281-3|CFL2	109.43880257439609	0.029570636687953285	4				NaN	NaN	0	NaN	524	2162	2687
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2689	12.205	NaN	354270	30	0	38506	0.106				-1	 	0	140	464.74516209918886	927.4757712651777	2	464.74554443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	525	2162	2687
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2690	12.207	NaN	84494	30	0	12831	0.106				-1	 	0	113	509.7847889833897	1017.5550250335795	2	509.7854309082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	526	2162	2687
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2691	12.208	NaN	21452	30	0	3006.9	0.106	+			27265	MEVKQLDK	8	84	495.76961541300875	NaN	0	495.7696533203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MEVKQLDK_	ENSG00000197457|ENST00000370053|STMN3;nc|ENSG00000197457|Q9NZ72-2|STMN3	108.08749611321984	1.7418937515398478	4				NaN	NaN	0	NaN	527	2162	2687
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2692	12.21	NaN	6171.6	30	0	728.58	0.106				-1	 	0	72	515.8028744726856	1029.5911960121712	2	515.8035888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	528	2162	2687
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2693	12.212	NaN	7790.7	30	0	1081.1	0.106			+	33821	RQSSTAKKLG	10	66	538.3148193359375	NaN	0	538.3148193359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RQSSTAKKLG_	REV__ENST00000494655.5_1_3:46966643-47018222:-|nuORF	75.04331003522576	0.12385377892588857	4				NaN	NaN	0	NaN	529	2162	2687
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2694	12.214	NaN	4648.1	30	0	640.45	0.035	+			34260	RTHGSNIAK	9	62	492.2719215422253	982.5292901512506	2	492.272216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RTHGSNIAK_	ENSG00000143079|ENST00000271277|CTTNBP2NL	88.1336951990783	0.07012705547711102	4				NaN	NaN	0	NaN	530	2162	2687
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2711	12.248	NaN	21771	30	0	6121.9	0.214			+	44214	TRLDIEKK	8	80	334.8690436919632	1001.5853016760897	3	334.8694763183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TRLDIEKK_	REV__AGAP9|p.S439Lfs*10|1|0.07|ENSG00000204172|chr10:47502950-47502950|G/-|frameshift_variant;REV__ENSG00000172650|ENST00000374094|AGAP5;REV__ENSG00000204172|ENST00000452145|AGAP9;REV__nc|ENSG00000204172|Q5VTM2|AGAP9;REV__nc|ENSG00000261011|Q8TF27|AGAP11	68.78682469695295	0.41700713582915416	4				NaN	NaN	0	NaN	544	2165	2710
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2712	12.252	NaN	3548.7	30	0	587.09	0.106	+			4101	ATDRSHYAK	9	65	524.762376921923	NaN	0	524.76220703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATDRSHYAK_	ENSG00000120265|ENST00000464889|PCMT1;nc|ENSG00000120265|P22061-2|PCMT1	69.6276240434122	0.10825701912424071	4				NaN	NaN	0	NaN	545	2165	2710
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2713	12.254	NaN	3668.8	30	0	392.86	0.106				-1	WSQAVCLPR	9	66	558.7850560193615	1115.555559105523	2	558.7860107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_WSQAVC(Carbamidomethyl (C))LPR_	ENST00000321287.12_1_19:52839700-52851056:+|nuORF;ENST00000594919.1_1_19:52839677-52851056:+|nuORF	60.11826168202944	0.21262886028301267	4				NaN	NaN	0	NaN	546	2165	2710
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2714	12.256	NaN	2664.9	30	0	791.66	0.106	+			21909	KRSSHRQA	8	51	485.2701690673419	968.5257852014838	2	485.27032470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KRSSHRQA_	CHD1|p.R233H|1|0.29|ENSG00000153922|chr5:98900972-98900972|C/T|missense_variant	37.15910966729921	0.6739408393984688	4				NaN	NaN	0	NaN	547	2165	2710
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2715	12.257	NaN	10482	30	0	2817.5	0.106			+	30779	QDSRQRRP	8	71	521.7793046726987	1041.5440564121973	2	521.780029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QDSRQRRP_	REV__ENSG00000198730|ENST00000361367|CTR9	51.33545320467046	0.5859736979383976	4				NaN	NaN	0	NaN	548	2165	2710
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2716	12.259	NaN	3525.1	30	0	701.41	0.106			+	21406	KMQAQKSR	8	58	488.7708846111132	975.5272162890265	2	488.7710876464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KMQAQKSR_	REV__ENSG00000165182|ENST00000379211|CXorf58	79.45101966838831	0.3281480470254892	4				NaN	NaN	0	NaN	549	2165	2710
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2717	12.261	NaN	1062.6	30	0	106.29	0.036			+	31117	QFTLGEILR	9	41	538.8068237304688	NaN	0	538.8068237304688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QFTLGEILR_	REV__ENSG00000144749|ENST00000273261|LRIG1;REV__LRIG1|p.H868Qfs*44|1|0.18|ENSG00000144749|chr3:66382276-66382286|TGCTCTCAATG/-|frameshift_variant;REV__nc|ENSG00000144749|Q96JA1-2|LRIG1	35.15202426646627	0.3000918603816441	4				NaN	NaN	0	NaN	550	2165	2710
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2728	12.286	NaN	65965	30	0	22457	0.214	+			20352	KESDESIK	8	83	468.2377012075371	934.4608494818742	2	468.23822021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KESDESIK_	tr|U7SSQ6|U7SSQ6_FUSNUDUF5673domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01454PE=4SV=1	99.37495909608758	0.2510236104623939	4				NaN	NaN	0	NaN	558	2168	2727
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2729	12.29	NaN	6105.4	30	0	1819.6	0.106	+			15184	GTSKSSELKK	10	70	532.8006518016972	1063.5867506701943	2	532.8016967773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTSKSSELKK_	CCDC92|p.I268Sfs*40|1|0.29|ENSG00000119242|chr12:123937253-123937253|G/-|frameshift_variant;CCDC92|p.S183Afs*24|1|0.43|ENSG00000119242|chr12:123937508-123937508|C/-|frameshift_variant;ENSG00000119242|ENST00000238156|CCDC92;nc|ENSG00000119242|Q53HC0-2|CCDC92	83.6470233535746	0.16744595502813267	4				NaN	NaN	0	NaN	559	2168	2727
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2730	12.292	NaN	3797.7	30	0	1057.8	0.106	+			19707	KDSRKLKK	8	54	501.8240002306335	1001.633447528067	2	501.82470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KDSRKLKK_	ENST00000482232.1_1_7:74167428-74167473:+|nuORF	90.77665401227738	0.27511901818546464	4				NaN	NaN	0	NaN	560	2168	2727
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2731	12.294	NaN	1074.2	30	0	491.56	0.106			+	-1	WLFGLERFV	9	27	604.827876828044	NaN	0	604.8278198242188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))WLFGLERFV_	REV__ENST00000324300.9_1_4:148453668-148453713:+|nuORF	21.9598887501803	0.3626577482100488	4				NaN	NaN	0	NaN	561	2168	2727
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2732	12.295	NaN	401.16	30	0	96.033	0.106	+			37257	SLAAGGGAAL	10	22	394.2189938967338	786.4234348602677	2	394.2192687988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SLAAGGGAAL_	ENSG00000113430|ENST00000231357|IRX4;nc|ENSG00000113430|P78413-2|IRX4	12.959181472943097	0.7505978423513068	4				NaN	NaN	0	NaN	562	2168	2727
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2733	12.297	NaN	503.98	30	0	90.795	0.039	+			22179	KSSSHQDLLFK	11	24	645.344482421875	NaN	0	645.344482421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KSSSHQDLLFK_	ENST00000296861.2_1_6:47199552-47199924:-|nuORF	17.468008924990375	0.456735970842152	4				NaN	NaN	0	NaN	563	2168	2727
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2734	12.298	NaN	2267.1	30	0	377.72	0.142				-1	YQAWCGPCR	9	36	570.7396757348383	1139.4647985364766	2	570.741455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_YQAWC(Carbamidomethyl (C))GPCR_	ENSG00000086288|ENST00000199447|NME8;NME8|p.R175Kfs*15|1|0.35|ENSG00000086288|chr7:37864412-37864413|-/A|frameshift_variant	18.324413293986947	0.6112419832031293	4				NaN	NaN	0	NaN	564	2168	2727
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2745	12.325	NaN	6888.1	30	0	1478.1	0.214	+			35598	SAYSGHNTK	9	64	482.7273386574908	963.4401243817816	2	482.7275695800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAYSGHNTK_	ENSG00000130038|ENST00000440314|CRACR2A	112.10723106719422	0.02684780151337622	4				NaN	NaN	0	NaN	572	2171	2744
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2746	12.328	NaN	6317.6	30	0	2887.1	0.106			+	31971	QQVQASPSPQ	10	41	371.18494498813476	1110.5330055646043	3	371.1854248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))QQVQASPSPQ_	REV__nc|ENSG00000109339|P53779-2|MAPK10	50.033510581677724	0.4566913063131936	4				NaN	NaN	0	NaN	573	2171	2744
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2747	12.33	NaN	3562.2	30	0	843.59	0.106			+	19684	KDPQLPSVPG	10	62	519.2857474039535	1036.5569418747068	2	519.2869262695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KDPQLPSVPG_	REV__sp|P16753|SCAF_HCMVACapsidscaffoldingproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL80PE=1SV=1;REV__sp|Q6SW62|SCAF_HCMVMCapsidscaffoldingproteinOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL80PE=3SV=1	56.632244143249146	0.3964695498866976	4				NaN	NaN	0	NaN	574	2171	2744
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2748	12.332	NaN	5724.4	30	0	2476.8	0.106				-1	 	0	52	334.8849200795191	1001.6329308387573	3	334.8852233886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	575	2171	2744
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2749	12.334	NaN	453.29	30	0	47.826	0.106				-1	MKQEIKEIM	9	23	389.2037048339844	NaN	0	389.2037048339844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_MKQEIKEIM(Oxidation (M))_	ENSG00000155974|ENST00000359742|GRIP1;nc|ENSG00000155974|Q9Y3R0-2|GRIP1;nc|ENSG00000155974|Q9Y3R0-3|GRIP1	30.317721548370564	0.32449924987115025	4				NaN	NaN	0	NaN	576	2171	2744
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2750	12.336	NaN	755.01	30	0	181.09	0.035			+	-1	TGPARMRC	8	23	322.15368045098296	963.439211953149	3	322.1540832519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),Oxidation (M)	_TGPARM(Oxidation (M))RC(Carbamidomethyl (C))_	REV__ENST00000581298.5_1_17:46189951-46190729:+|nuORF	18.324413293986947	0.7971860551947066	4				NaN	NaN	0	NaN	577	2171	2744
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2751	12.336	NaN	1528.6	30	0	457.95	0.14	+			25828	LSDQRPMAP	9	50	507.7568968244351	1013.4992407156702	2	507.7572326660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSDQRPMAP_	ENST00000495200.1_1_2:198365246-198365531:+|nuORF	60.97194046774394	0.20551255781574032	4				NaN	NaN	0	NaN	578	2171	2744
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2763	12.364	NaN	29538	30	0	4285.9	0.214	+			14167	GSNPEVQKK	9	85	493.7665267640407	NaN	0	493.7665100097656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSNPEVQKK_	CYP4V2|p.K471Sfs*4|1|0.3|ENSG00000145476|chr4:186210472-186210472|A/-|frameshift_variant;ENSG00000145476|ENST00000378802|CYP4V2;ENST00000502665.1_1_4:187126176-187131792:+|nuORF;nc|ENSG00000145476|Q6ZWL3-2|CYP4V2	117.5257442709337	0.0029007600543599623	4				NaN	NaN	0	NaN	587	2174	2762
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2764	12.367	NaN	17320	30	0	4935.1	0.106	+			32488	QVNITVQK	8	67	465.27384821813627	928.5331435030726	2	465.274169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QVNITVQK_	ENSG00000074696|ENST00000261875|HACD3;HACD3|p.Q75K|1|0.24|ENSG00000074696|chr15:65556757-65556757|C/A|missense_variant	74.25504064058377	0.37144338840759816	4				NaN	NaN	0	NaN	588	2174	2762
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2765	12.369	NaN	3931.9	30	0	660.27	0.106	+			21679	KQDSNNKK	8	59	481.2559573130244	960.4973616928488	2	481.25628662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KQDSNNKK_	ENSG00000174948|ENST00000389740|GPR149;GPR149|p.I582Nfs*6|1|0.33|ENSG00000174948|chr3:154338150-154338151|-/T|frameshift_variant	90.36981228632155	0.27635063874291205	4				NaN	NaN	0	NaN	589	2174	2762
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2766	12.371	NaN	6591.5	30	0	933.6	0.106	+			40189	STRDSKEGGK	10	69	532.7704156471183	1063.5262783610365	2	532.7708740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STRDSKEGGK_	nc|ENSG00000015153|Q8IY57-4|YAF2	35.15202426646627	0.5927656479315102	4				NaN	NaN	0	NaN	590	2174	2762
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2767	12.373	NaN	2399.4	30	0	792.53	0.106	+			20617	KGEHLPKSLE	10	33	379.8789520906158	NaN	0	379.8789978027344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KGEHLPKSLE_	ENSG00000162944|ENST00000295049|RFTN2	28.081489160057373	0.40797012399963245	4				NaN	NaN	0	NaN	591	2174	2762
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2768	12.375	NaN	4110.9	30	0	831.66	0.037	+			14645	GTHASEHAVNK	11	67	575.7829369074993	1149.5513208817986	2	575.7841186523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTHASEHAVNK_	ENSG00000166595|ENST00000422424|CIAO2B;ENST00000562362.5_1_16:66966108-66968009:-|nuORF	89.02883481214508	0.10275031849113642	4				NaN	NaN	0	NaN	592	2174	2762
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2769	12.375	NaN	4353.9	30	0	1494.3	0.14				-1	 	0	48	461.76394360365356	921.5133342741071	2	461.76409912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	593	2174	2762
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2784	12.409	NaN	54806	30	0	16777	0.159			+	19730	KDTSKLKK	8	80	474.29713541527894	946.5797178973579	2	474.29742431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KDTSKLKK_	REV__tr|U7T3W5|U7T3W5_FUSNUProteaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00640PE=4SV=1	87.69643885390035	0.28444366722805053	4				NaN	NaN	0	NaN	605	2177	2783
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2785	12.411	NaN	2709.1	30	0	581.6	0.106				-1	 	0	43	427.7395399018698	853.4645268705397	2	427.74005126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	606	2177	2783
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2786	12.413	NaN	2100.1	30	0	690.99	0.106				-1	 	0	54	485.2701690673419	968.5257852014838	2	485.2887878417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	607	2177	2783
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2787	12.415	NaN	2524.8	30	0	208.11	0.106				-1	IYMGFDCQE	9	29	581.730687400899	1161.446821868598	2	581.7321166992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_IYMGFDC(Carbamidomethyl (C))QE_	MYOM2|p.L928M|1|0.16|ENSG00000036448|chr8:2106289-2106289|C/A|missense_variant	16.473147378115264	0.6112419832031293	4				NaN	NaN	0	NaN	608	2177	2783
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2788	12.417	NaN	1461.9	30	0	364.65	0.106			+	12250	GATLLIMM	8	35	425.23185688668974	848.4491608401795	2	425.2322692871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GATLLIMM_	REV__ENSG00000130023|ENST00000366773|ERMARD;REV__ERMARD|p.Q439Tfs*6|1|0.4|ENSG00000130023|chr6:169773393-169773394|-/A|frameshift_variant;REV__nc|ENSG00000130023|Q5T6L9-2|ERMARD;REV__nc|ENSG00000130023|Q5T6L9-3|ERMARD;REV__nc|ENSG00000130023|Q5T6L9-4|ERMARD	29.841539824830324	0.7289191502596711	4				NaN	NaN	0	NaN	609	2177	2783
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2789	12.419	NaN	1726.6	30	0	363.1	0.106			+	40272	STSQNIILIT	10	43	363.876181127353	NaN	0	363.8756408691406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STSQNIILIT_	REV__ENST00000502346.1_1_5:82352385-82352481:-|nuORF	27.882242232435846	0.4086243523356342	4				NaN	NaN	0	NaN	610	2177	2783
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2790	12.42	NaN	553.42	30	0	84.665	0.037			+	16577	HFVRGLGLFE	10	15	587.8241526004625	NaN	0	588.2929077148438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HFVRGLGLFE_	REV__ENSG00000235961|ENST00000421798|PNMA6A	15.641811463095205	0.4201028297492154	4				NaN	NaN	0	NaN	611	2177	2783
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2804	12.449	NaN	95951	30	0	30777	0.214	+			38784	SSMPSSRHK	9	109	508.74993659459705	1015.4853202559941	2	508.750732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSMPSSRHK_	AFF4|p.R689Gfs*28|1|0.29|ENSG00000072364|chr5:132896566-132896566|A/-|frameshift_variant;ENSG00000072364|ENST00000265343|AFF4;nc|ENSG00000072364|Q9UHB7-2|AFF4	112.10723106719422	0.02684780151337622	4				NaN	NaN	0	NaN	622	2180	2803
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2805	12.453	NaN	49861	30	0	12267	0.106	+			38785	SSMPSSRHK	9	78	339.5022065045835	1015.4847901139506	3	339.5028991699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSMPSSRHK_	AFF4|p.R689Gfs*28|1|0.29|ENSG00000072364|chr5:132896566-132896566|A/-|frameshift_variant;ENSG00000072364|ENST00000265343|AFF4;nc|ENSG00000072364|Q9UHB7-2|AFF4	58.22992032128504	0.22837015374068087	4				NaN	NaN	0	NaN	623	2180	2803
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2806	12.455	NaN	3663.6	30	0	1032.2	0.106			+	30355	PVCLVSRI	8	53	443.7629809894656	NaN	0	443.7630310058594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PVCLVSRI_	REV__ENSG00000128655|ENST00000286063|PDE11A;REV__ENST00000497003.5_1_2:178552959-178791632:-|nuORF;REV__nc|ENSG00000128655|Q9HCR9-2|PDE11A;REV__nc|ENSG00000128655|Q9HCR9-3|PDE11A;REV__nc|ENSG00000128655|Q9HCR9-4|PDE11A	35.200714571348534	1.7418937515398478	4				NaN	NaN	0	NaN	624	2180	2803
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2807	12.456	NaN	3680.8	30	0	855.83	0.106	+			22617	KTTQQRES	8	57	489.25446084008814	976.4943687469763	2	489.25469970703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTTQQRES_	NUAK1|p.K470T|1|0.31|ENSG00000074590|chr12:106067379-106067379|T/G|missense_variant	47.657333605630114	0.6087971902037268	4				NaN	NaN	0	NaN	625	2180	2803
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2808	12.458	NaN	1779.6	30	0	704.51	0.106			+	43713	TKQLGKPQ	8	39	450.2686322326371	898.5227115320743	2	450.2689208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TKQLGKPQ_	REV__ENSG00000135336|ENST00000392844|ORC3;REV__nc|ENSG00000135336|Q9UBD5-2|ORC3;REV__nc|ENSG00000135336|Q9UBD5-3|ORC3	31.529811441608018	0.715883593221515	4				NaN	NaN	0	NaN	626	2180	2803
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2809	12.46	NaN	1995.3	30	0	352.25	0.106			+	29386	PAPDAAKK	8	44	399.2293056441267	NaN	0	399.2293395996094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PAPDAAKK_	REV__ENST00000422983.1_1_1:53038862-53039237:+|nuORF	79.45101966838831	1.7418937515398478	4				NaN	NaN	0	NaN	627	2180	2803
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2810	12.462	NaN	768.1	30	0	150.25	0.036			+	20858	KILYNDLLS	9	27	360.2082824707031	NaN	0	360.2082824707031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KILYNDLLS_	REV__ENSG00000170027|ENST00000307630|YWHAG	18.262085536374414	0.37517301184500873	4				NaN	NaN	0	NaN	628	2180	2803
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2825	12.494	NaN	37573	30	0	7266.8	0.175	+			10700	EYWSKIKCK	9	82	592.8104659068288	1183.6063788804574	2	592.811279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EYWSKIKCK_	ENSG00000147548|ENST00000317025|NSD3;ENST00000528828.1_1_8:38133161-38137268:-|nuORF;nc|ENSG00000147548|Q9BZ95-2|NSD3;nc|ENSG00000147548|Q9BZ95-4|NSD3;nc|ENSG00000147548|Q9BZ95-5|NSD3	70.8162118820467	0.13725933411854815	4				NaN	NaN	0	NaN	640	2183	2824
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2826	12.496	NaN	11190	30	0	4517.1	0.106				-1	 	0	64	348.5445108403142	1042.6117031211427	3	348.54498291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	641	2183	2824
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2827	12.498	NaN	2927	30	0	621.55	0.106			+	32810	RAVMGHAEQ	9	39	333.49865963315096	997.4741494996529	3	333.49932861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RAVMGHAEQ_	REV__ENSG00000070182|ENST00000644917|SPTB;REV__nc|ENSG00000070182|P11277-3|SPTB;REV__nc|ENSG00000070182|P11277|SPTB	29.170058357718403	0.5306379469863586	4				NaN	NaN	0	NaN	642	2183	2824
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2828	12.5	NaN	1878.3	30	0	411.39	0.106			+	9323	EIFESSDPM	9	23	527.7251586914062	NaN	0	527.7251586914062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EIFESSDPM_	REV__ENST00000426528.5_1_X:102139368-102152590:+|nuORF	12.206847966760668	0.39566704307768535	4				NaN	NaN	0	NaN	643	2183	2824
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2829	12.502	NaN	1537.7	30	0	387.42	0.106			+	-1	LCQQLVCSQK	10	48	603.8020468870463	1205.5895408408926	2	603.8023071289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_LCQQLVC(Carbamidomethyl (C))SQK_	REV__KDM2A|p.R607Q|1|0.13|ENSG00000173120|chr11:67245445-67245445|G/A|missense_variant	36.446750945000026	0.5818864909973037	4				NaN	NaN	0	NaN	644	2183	2824
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2830	12.504	NaN	1293.8	30	0	525.28	0.106	+			27580	MPKCLPPG	8	37	421.7184753417969	NaN	0	421.7184753417969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MPKCLPPG_	NCOA6|p.R514C|1|0.15|ENSG00000198646|chr20:34754857-34754857|G/A|missense_variant	37.028477286268924	1.7418937515398478	4				NaN	NaN	0	NaN	645	2183	2824
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2831	12.506	NaN	66341	30	0	26827	0.036	+			22064	KSKSETKNK	9	53	350.5362675497681	1048.5869732495044	3	350.5367126464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KSKSETKNK_	ENSG00000078795|ENST00000508883|PKD2L2;nc|ENSG00000078795|Q9NZM6-2|PKD2L2;nc|ENSG00000078795|Q9NZM6-5|PKD2L2;nc|ENSG00000078795|Q9NZM6-6|PKD2L2;nc|ENSG00000078795|Q9NZM6-7|PKD2L2;PKD2L2|p.A379Cfs*12|1|0.25|ENSG00000078795|chr5:137907894-137907895|-/T|frameshift_variant;PKD2L2|p.F477Lfs*7|1|0.39|ENSG00000078795|chr5:137921733-137921733|T/-|frameshift_variant	30.317721548370564	0.5199124245378496	4				NaN	NaN	0	NaN	646	2183	2824
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2843	12.531	NaN	48577	30	0	14618	0.21				-1	 	0	75	525.3009968432208	1048.5874407532415	2	525.3020629882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	655	2186	2842
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2844	12.535	NaN	2215.1	30	0	478.38	0.106	+			22493	KTNPNSIKK	9	53	515.305436538966	1028.5963201447319	2	515.3060913085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTNPNSIKK_	ENSG00000065328|ENST00000378714|MCM10;ENST00000481292.1_1_10:13237140-13243699:+|nuORF;MCM10|p.N701Tfs*35|2|0.27|ENSG00000065328|chr10:13197741-13197741|A/-|frameshift_variant;MCM10|p.R719Gfs*17|1|0.35|ENSG00000065328|chr10:13198715-13198715|A/-|frameshift_variant;nc|ENSG00000065328|Q7L590|MCM10	90.60085204095205	0.06317133949006545	4				NaN	NaN	0	NaN	656	2186	2842
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2845	12.537	NaN	5445.6	30	0	681.42	0.106			+	30604	QAQTRPSIG	9	68	479.2585792074997	956.5026054817994	2	479.25921630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QAQTRPSIG_	REV__ENST00000250894.8_2_16:1819320-1819737:+|nuORF	60.97194046774394	0.20551255781574032	4				NaN	NaN	0	NaN	657	2186	2842
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2846	12.538	NaN	6073	30	0	750.79	0.106	+			38616	SSGSTAIKK	9	59	439.7493517306582	877.4841505281164	2	440.2487487792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSGSTAIKK_	ENSG00000131171|ENST00000373212|SH3BGRL;SH3BGRL|p.K19T|1|0.55|ENSG00000131171|chrX:81276994-81276994|A/C|missense_variant	49.536043120802724	0.308405419312776	4				NaN	NaN	0	NaN	658	2186	2842
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2847	12.54	NaN	956.53	30	0	183.95	0.106	+			20570	KFSTEHRTK	9	45	567.3087158203125	NaN	0	567.3087158203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KFSTEHRTK_	DNAJC13|p.E92K|1|0.4|ENSG00000138246|chr3:132447450-132447450|G/A|missense_variant	32.75053402867276	0.3122164853807509	4				NaN	NaN	0	NaN	659	2186	2842
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2848	12.542	NaN	1281.5	30	0	71.716	0.106				-1	KCNLAFQR	8	47	346.18346123846845	1035.5285543156053	3	346.1844482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_KC(Carbamidomethyl (C))NLAFQR_	ENSG00000135968|ENST00000309863|GCC2	29.14955571784316	0.7342621283720113	4				NaN	NaN	0	NaN	660	2186	2842
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2849	12.544	NaN	2001.8	30	0	305.49	0.036	+			12013	FWGAQLPRP	9	54	536.2917628198953	1070.5689727065906	2	536.2932739257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FWGAQLPRP_	ENST00000590650.1_1_19:36235732-36236187:-|nuORF	25.450171626174864	0.5654022654467333	4				NaN	NaN	0	NaN	661	2186	2842
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2861	12.569	NaN	27078	30	0	8731.3	0.214	+			3506	ASSKDAIKK	9	79	474.2790312021183	946.5435094710366	2	474.2792053222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASSKDAIKK_	DSTN|p.Y117H|1|0.26|ENSG00000125868|chr20:17604592-17604592|T/C|missense_variant;ENSG00000125868|ENST00000246069|DSTN;ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000400899.2_1_1:11051144-11051557:-|nuORF;ENST00000530945.1_1_11:65623104-65623215:-|nuORF;nc|ENSG00000125868|P60981-2|DSTN;nc|ENSG00000165410|Q9Y281-3|CFL2	120.30596017624542	0.02101454110788768	4				NaN	NaN	0	NaN	670	2189	2860
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2862	12.573	NaN	4329	30	0	745.41	0.106	+			38617	SSGSTAIKK	9	52	439.7493517306582	877.4841505281164	2	439.7506103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSGSTAIKK_	ENSG00000131171|ENST00000373212|SH3BGRL;SH3BGRL|p.K19T|1|0.55|ENSG00000131171|chrX:81276994-81276994|A/C|missense_variant	98.62937762414208	0.04060045538121712	4				NaN	NaN	0	NaN	671	2189	2860
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2863	12.575	NaN	2101.5	30	0	457.68	0.106				-1	 	0	60	464.74516209918886	927.4757712651777	2	464.7456359863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	672	2189	2860
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2864	12.577	NaN	3911.4	30	0	976.46	0.106	+			21788	KQVCEIIE	8	67	481.2559573130244	960.4973616928488	2	481.75762939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KQVCEIIE_	ENSG00000168090|ENST00000303904|COPS6;ENST00000496358.1_1_7:99686670-99688376:+|nuORF	55.50420428727701	0.5462892107279674	4				NaN	NaN	0	NaN	673	2189	2860
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2865	12.578	NaN	4837.5	30	0	624.21	0.106	+			34118	RSSDSSSKLAK	11	73	583.3117255270558	1164.6088981209116	2	583.3126831054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RSSDSSSKLAK_	AFF1|p.R820Tfs*98|1|0.12|ENSG00000172493|chr4:87125045-87125048|AGAA/-|frameshift_variant;ENSG00000172493|ENST00000395146|AFF1;ENST00000503369.1_1_4:88036121-88046296:+|nuORF;nc|ENSG00000172493|P51825-3|AFF1;nc|ENSG00000172493|P51825|AFF1	82.49433358170734	0.13157841501534762	4				NaN	NaN	0	NaN	674	2189	2860
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2866	12.58	NaN	2233.7	30	0	279.32	0.106	+			13122	GGGSKVPQK	9	49	429.24500564035816	856.4754583475163	2	429.245361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GGGSKVPQK_	ENSG00000181163|ENST00000296930|NPM1;ENST00000403105.1_1_6:70415475-70415688:-|nuORF;ENST00000438918.1_1_2:204637659-204638058:-|nuORF;ENST00000458237.1_1_X:32224171-32224564:+|nuORF;nc|ENSG00000181163|P06748-2|NPM1;nc|ENSG00000181163|P06748-3|NPM1;NPM1|p.A160Tfs*3|1|0.11|ENSG00000181163|chr5:171392931-171392932|-/ACCA|frameshift_variant	79.71258880314673	0.09879134589249085	4				NaN	NaN	0	NaN	675	2189	2860
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2867	12.582	NaN	1723.8	30	0	665.71	0.036	+			31263	QHRGSCRSR	9	33	543.7691935681672	1085.5238342031344	2	543.7706298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QHRGSCRSR_	ENST00000392973.7_1_16:90075326-90076003:-|nuORF	31.529811441608018	0.5085848003137583	4				NaN	NaN	0	NaN	676	2189	2860
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2881	12.612	NaN	4575.9	30	0	1490.3	0.214	+			40808	SVDYGKKSK	9	62	506.27655912216886	1010.5385653111377	2	506.2769470214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVDYGKKSK_	ENSG00000075886|ENST00000321253|TUBA3D;ENSG00000123416|ENST00000336023|TUBA1B;ENSG00000127824|ENST00000248437|TUBA4A;ENSG00000167552|ENST00000301071|TUBA1A;ENSG00000167553|ENST00000301072|TUBA1C;ENSG00000198033|ENST00000400113|TUBA3C;ENST00000442739.1_1_22:21363397-21363730:-|nuORF;nc|ENSG00000127824|P68366-2|TUBA4A;nc|ENSG00000167552|Q71U36-2|TUBA1A;nc|ENSG00000198033|P0DPH7-2|TUBA3C;TUBA3C|p.T361Rfs*18|1|0.17|ENSG00000198033|chr13:19174136-19174136|G/-|frameshift_variant;TUBA3D|p.G366Efs*13|1|0.17|ENSG00000075886|chr2:131482588-131482588|G/-|frameshift_variant;TUBA3D|p.V328Pfs*54|1|0.45|ENSG00000075886|chr2:131480665-131480666|-/CCCAAAGA|frameshift_variant;TUBA4A|p.V182Gfs*32|1|0.04|ENSG00000127824|chr2:219251156-219251157|-/TACACCA|frameshift_variant	106.68306549817024	0.032382560583716295	4				NaN	NaN	0	NaN	687	2192	2880
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2882	12.615	NaN	7868.4	30	0	1296.3	0.106				-1	 	0	67	521.7793046726987	1041.5440564121973	2	521.7805786132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	688	2192	2880
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2883	12.617	NaN	7541.3	30	0	1688.7	0.106	+			3418	ASQKNFKAK	9	57	341.19723987608756	1020.5698902284628	3	341.1977233886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASQKNFKAK_	ENSG00000176731|ENST00000619594|RBIS;ENST00000523245.1_1_8:86129602-86132627:-|nuORF;nc|ENSG00000176731|Q8N0T1-2|RBIS	31.529811441608018	0.5085848003137583	4				NaN	NaN	0	NaN	689	2192	2880
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2884	12.619	NaN	1458.6	30	0	366.23	0.106	+			9154	EGNHRNTR	8	51	492.2400337131185	NaN	0	492.2398681640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EGNHRNTR_	ENSG00000173681|ENST00000379682|BCLAF3;nc|ENSG00000173681|A2AJT9-2|BCLAF3	44.377184641726394	1.7418937515398478	4				NaN	NaN	0	NaN	690	2192	2880
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2885	12.621	NaN	2264	30	0	412.17	0.106			+	43675	TKDKGQAG	8	49	402.7140040823882	NaN	0	402.7140808105469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TKDKGQAG_	REV__ENSG00000079313|ENST00000170168|REXO1	88.64286706044652	1.7418937515398478	4				NaN	NaN	0	NaN	691	2192	2880
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2886	12.623	NaN	2013.4	30	0	341.43	0.036			+	21946	KSAELKQQK	9	51	530.3120528013222	NaN	0	530.3120727539062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KSAELKQQK_	REV__ENSG00000100665|ENST00000557004|SERPINA4	49.536043120802724	0.20989033510253738	4				NaN	NaN	0	NaN	692	2192	2880
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2887	12.623	NaN	1584.2	30	0	200.57	0.141			+	31950	QQRLLGEAPG	10	58	534.7928580706146	1067.571163208029	2	535.249755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QQRLLGEAPG_	REV__ENSG00000074201|ENST00000525428|CLNS1A	42.396135135203025	0.5270658956260207	4				NaN	NaN	0	NaN	693	2192	2880
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2900	12.652	NaN	24215	30	0	3752.9	0.214	+			1536	AGCGKTYTK	9	84	493.24156052001985	984.4685681068397	2	493.24188232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_AGC(Carbamidomethyl (C))GKTYTK_	ENSG00000127528|ENST00000248071|KLF2;ENSG00000136826|ENST00000374672|KLF4;ENST00000497048.5_1_9:110248034-110250560:-|nuORF;KLF4|p.D429Lfs*13|1|0.08|ENSG00000136826|chr9:107485905-107485906|TC/-|frameshift_variant;nc|ENSG00000136826|O43474-4|KLF4;nc|ENSG00000136826|O43474|KLF4	181.4070731898895	0.0011547877412507563	4				NaN	NaN	0	NaN	703	2195	2899
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2901	12.656	NaN	3000.1	30	0	712.91	0.106	+			22172	KSSKIGKRV	9	60	501.8240002306335	1001.633447528067	2	502.2979431152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KSSKIGKRV_	ENSG00000164306|ENST00000314970|PRIMPOL;nc|ENSG00000164306|Q96LW4-2|PRIMPOL;PRIMPOL|p.L523*|1|0.1|ENSG00000164306|chr4:184694659-184694659|T/-|frameshift_variant	39.252832667884924	0.4290233611298554	4				NaN	NaN	0	NaN	704	2195	2899
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2902	12.658	NaN	2112.7	30	0	273.18	0.106	+			44857	TTTTTSVKK	9	51	483.77648322355293	NaN	0	483.7763366699219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TTTTTSVKK_	ENSG00000103549|ENST00000324685|RNF40;ENST00000493683.5_1_16:30773821-30780773:+|nuORF;nc|ENSG00000103549|O75150-3|RNF40;nc|ENSG00000103549|O75150-4|RNF40	65.46538089061403	0.1260090208616529	4				NaN	NaN	0	NaN	705	2195	2899
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2903	12.66	NaN	1658.2	30	0	281.71	0.106			+	9832	EPLPQLCHR	9	54	546.782389688189	1091.550226443178	2	546.782958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EPLPQLCHR_	REV__ENSG00000137218|ENST00000373018|FRS3	44.116797842482775	0.37197099687881774	4				NaN	NaN	0	NaN	706	2195	2899
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2904	12.661	NaN	2245.6	30	0	344.64	0.106	+			8386	EAMVACRQL	9	60	510.7512902101517	1019.4880274871034	2	510.7843322753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EAMVACRQL_	ENSG00000115318|ENST00000264094|LOXL3;ENSG00000138131|ENST00000260702|LOXL4;nc|ENSG00000115318|P58215-2|LOXL3;nc|ENSG00000115318|P58215-3|LOXL3	35.61828744233558	0.47037581924408073	4				NaN	NaN	0	NaN	707	2195	2899
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2905	12.663	NaN	755.12	30	0	98.013	0.106			+	-1	ISFISMRK	8	32	333.1897830429414	NaN	0	333.1898193359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_ISFISM(Oxidation (M))RK_	REV__tr|U7SHC7|U7SHC7_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02262PE=4SV=1	30.503639358989545	1.7418937515398478	4				NaN	NaN	0	NaN	708	2195	2899
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2906	12.665	NaN	1244	30	0	198.04	0.038	+			8863	EERKHKGALQ	10	42	598.3302033484538	1194.6458537637075	2	598.3306274414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EERKHKGALQ_	HYDIN|p.E2293Q|1|0.18|ENSG00000157423|chr16:70938732-70938732|C/G|missense_variant	56.43379154798735	0.3982744522255666	4				NaN	NaN	0	NaN	709	2195	2899
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2919	12.693	NaN	13575	30	0	3464.2	0.214			+	1681	AGSSWWKK	8	71	475.2469863626578	948.4794197921157	2	475.2475891113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AGSSWWKK_	REV__ENSG00000240303|ENST00000264990|ACAD11;REV__ENST00000469042.5_1_3:132298334-132378619:-|nuORF;REV__nc|ENSG00000240303|Q709F0-2|ACAD11;REV__nc|ENSG00000240303|Q709F0-3|ACAD11	58.78195531508484	0.5138399468736706	4				NaN	NaN	0	NaN	719	2198	2918
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2920	12.696	NaN	8829.8	30	0	1521.4	0.106	+			22681	KVADHSGQVK	10	67	534.7928580706146	1067.571163208029	2	534.7938842773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVADHSGQVK_	ENSG00000188243|ENST00000682242|COMMD6;ENST00000477377.1_1_13:76104099-76111947:-|nuORF;nc|ENSG00000188243|Q7Z4G1-2|COMMD6	131.115847015877	0.013122790858444951	4				NaN	NaN	0	NaN	720	2198	2918
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2921	12.698	NaN	14414	30	0	1806.5	0.106	+			22956	KVQSVSQNK	9	83	509.2876409482824	NaN	0	509.2878723144531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KVQSVSQNK_	ENSG00000225921|ENST00000451315|NOL7;NOL7|p.K238Nfs*16|1|0.31|ENSG00000225921|chr6:13620760-13620760|A/-|frameshift_variant;NOL7|p.N240Mfs*14|1|0.23|ENSG00000225921|chr6:13620769-13620769|A/-|frameshift_variant	120.63048641472336	0.0020331986223823292	4				NaN	NaN	0	NaN	721	2198	2918
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2922	12.7	NaN	6825.9	30	0	994.68	0.106			+	12210	GARGPRHK	8	70	439.75657507392543	877.4985972146509	2	439.7568054199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GARGPRHK_	REV__ENST00000529681.5_1_11:1263596-1263746:+|nuORF	44.53106598305862	0.628196326904373	4				NaN	NaN	0	NaN	722	2198	2918
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2923	12.702	NaN	1142.4	30	0	331.32	0.106	+			16255	HEENLKTK	8	44	499.76690673828125	NaN	0	499.76690673828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HEENLKTK_	ENSG00000136942|ENST00000348462|RPL35;ENST00000373570.8_1_9:127620199-127620799:-|nuORF;ENST00000433398.1_1_7:66071742-66071856:-|nuORF;ENST00000487431.1_1_9:127620199-127623861:-|nuORF	66.42927471994793	1.7418937515398478	4				NaN	NaN	0	NaN	723	2198	2918
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2924	12.704	NaN	36686	30	0	24585	0.037				-1	 	0	64	383.19564791576136	1146.565114347484	3	383.1958312988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	724	2198	2918
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2925	12.704	NaN	21659	30	0	12586	0.142			+	34001	RSHMSIVCKS	10	63	574.2894853583583	1146.5644177835165	2	574.2908935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RSHMSIVCKS_	REV__nc|ENSG00000223519|B7ZC32|KIF28P	50.79123845855914	0.44970922346023856	4				NaN	NaN	0	NaN	725	2198	2918
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2937	12.732	NaN	173050	30	0	44175	0.214	+			38821	SSNDKVIKK	9	108	509.79756159879224	1017.5805702643845	2	509.79815673828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSNDKVIKK_	ALDH3A1|p.P445Rfs*6|4|0.31|ENSG00000108602|chr17:19738336-19738336|G/-|frameshift_variant;ENSG00000108602|ENST00000225740|ALDH3A1;ENST00000479677.6_1_17:19641536-19646703:-|nuORF	155.5846463517096	0.005567437401040498	4				NaN	NaN	0	NaN	734	2201	2936
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2938	12.735	NaN	1413.8	30	0	152.4	0.106	+			40271	STSQMTSHK	9	59	503.7346496582031	NaN	0	503.7346496582031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STSQMTSHK_	CASZ1|p.Y1191*|1|0.04|ENSG00000130940|chr1:10646251-10646251|G/-|frameshift_variant;ENSG00000130940|ENST00000377022|CASZ1;ENST00000496432.6_1_1:10713095-10754402:-|nuORF;nc|ENSG00000130940|Q86V15-2|CASZ1	98.62937762414208	0.024200618960070384	4				NaN	NaN	0	NaN	735	2201	2936
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2939	12.737	NaN	35191	30	0	6596.8	0.106				-1	 	0	76	340.200719870077	1017.5803302104312	3	340.20111083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	736	2201	2936
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2940	12.739	NaN	1115.8	30	0	241.58	0.106			+	22182	KSSSVTKIQ	9	43	489.2848407257813	NaN	0	489.28472900390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KSSSVTKIQ_	REV__ENSG00000172159|ENST00000304195|FRMD3;REV__FRMD3|p.I435Nfs*10|1|0.21|ENSG00000172159|chr9:83248408-83248409|-/T|frameshift_variant;REV__nc|ENSG00000172159|A2A2Y4-2|FRMD3;REV__nc|ENSG00000172159|A2A2Y4-3|FRMD3;REV__nc|ENSG00000172159|A2A2Y4-5|FRMD3	34.172542307311794	0.30503706118289736	4				NaN	NaN	0	NaN	737	2201	2936
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2941	12.741	NaN	1663.2	30	0	241.72	0.106	+			1584	AGKKPVVGK	9	43	442.2897033691406	NaN	0	442.2897033691406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AGKKPVVGK_	ENSG00000174444|ENST00000307961|RPL4;ENST00000422486.1_1_3:185135285-185135612:-|nuORF;ENST00000567229.5_1_15:66791747-66793486:-|nuORF	35.61828744233558	0.29773779453147337	4				NaN	NaN	0	NaN	738	2201	2936
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2942	12.742	NaN	3653.4	30	0	399.64	0.033				-1	 	0	53	444.7481402739165	887.481727614633	2	444.7483215332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	739	2201	2936
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2943	12.743	NaN	1078.5	30	0	459.65	0.143			+	-1	WCHLSEENH	9	19	606.2477250535185	1210.4808971738369	2	606.2479248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_WC(Carbamidomethyl (C))HLSEENH_	REV__ENST00000256644.8_1_1:110948947-110950258:-|nuORF	6.735540347417125	0.6112419832031293	4				NaN	NaN	0	NaN	740	2201	2936
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2960	12.78	NaN	29902	30	0	15940	0.214	+			5206	ATTSNTVSK	9	67	454.7372268189646	907.4599007047292	2	454.7375183105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATTSNTVSK_	ENSG00000177469|ENST00000357037|CAVIN1	126.24258497203832	0.01742065577488747	4				NaN	NaN	0	NaN	754	2204	2959
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2961	12.784	NaN	37654	30	0	5606.7	0.106				-1	 	0	83	488.2639637460706	974.5133745589412	2	488.2642822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	755	2204	2959
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2962	12.786	NaN	3230.8	30	0	303.93	0.106			+	21448	KNEKLCEI	8	72	517.2724170192697	1032.5302811053393	2	517.2732543945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_KNEKLC(Carbamidomethyl (C))EI_	REV__ENSG00000090863|ENST00000422840|GLG1;REV__ENST00000561481.1_1_16:74497146-74501752:-|nuORF;REV__ENST00000562090.5_1_16:74487067-74506519:-|nuORF;REV__GLG1|p.A842T|2|0.26|ENSG00000090863|chr16:74467761-74467761|C/T|missense_variant;REV__nc|ENSG00000090863|Q92896-2|GLG1;REV__nc|ENSG00000090863|Q92896-3|GLG1	87.75429964447693	0.2842685068779738	4				NaN	NaN	0	NaN	756	2204	2959
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2963	12.787	NaN	1779.4	30	0	372.85	0.106	+			17090	HSCPESVKK	9	58	536.2656829623529	1070.5168129915057	2	536.2669067382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_HSC(Carbamidomethyl (C))PESVKK_	ENSG00000178425|ENST00000319550|NT5DC1;nc|ENSG00000178425|Q5TFE4-2|NT5DC1;NT5DC1|p.F379Lfs*74|1|0.1|ENSG00000178425|chr6:116239002-116239002|T/-|frameshift_variant	79.71258880314673	0.09879134589249085	4				NaN	NaN	0	NaN	757	2204	2959
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2964	12.789	NaN	1147.4	30	0	207.32	0.106	+			9062	EGGIEDLVR	9	45	494.2574157714844	NaN	0	494.2574157714844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EGGIEDLVR_	ENSG00000186862|ENST00000619208|PDZD7	42.396135135203025	0.2590952873412954	4				NaN	NaN	0	NaN	758	2204	2959
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2965	12.791	NaN	1052.8	30	0	128.76	0.035			+	-1	KSSFMRRI	8	43	520.7893676757812	NaN	0	520.7893676757812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_KSSFM(Oxidation (M))RRI_	REV__ENSG00000163104|ENST00000354268|SMARCAD1;REV__nc|ENSG00000163104|Q9H4L7-2|SMARCAD1;REV__nc|ENSG00000163104|Q9H4L7-3|SMARCAD1;REV__SMARCAD1|p.K734Qfs*6|1|0.31|ENSG00000163104|chr4:94278630-94278631|-/C|frameshift_variant	38.80614096846853	1.7418937515398478	4				NaN	NaN	0	NaN	759	2204	2959
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2966	12.792	NaN	8376.8	30	0	1817.6	0.141	+			51170	YPFFRAKAK	9	45	564.3222640041217	1126.6299750750434	2	564.323974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YPFFRAKAK_	ENSG00000137809|ENST00000315757|ITGA11;nc|ENSG00000137809|Q9UKX5-2|ITGA11	25.57405402267927	0.5642445186134241	4				NaN	NaN	0	NaN	760	2204	2959
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2981	12.825	NaN	8541.8	30	0	3657.5	0.214				-1	 	0	58	324.2058485981704	969.5957163947112	3	324.2062683105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	772	2207	2980
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2982	12.829	NaN	1757	30	0	175.9	0.106			+	18068	IKEISLCCY	9	53	536.2656829623529	1070.5168129915057	2	537.2254638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IKEISLCCY_	REV__ENST00000423432.6_1_X:71483217-71483493:+|nuORF	23.04248740728303	0.5879033540491928	4				NaN	NaN	0	NaN	773	2207	2980
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2983	12.831	NaN	2769	30	0	392.52	0.106	+			22690	KVAGAATPKK	10	64	485.8051768034598	969.5958006737196	2	485.8052062988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KVAGAATPKK_	ENSG00000124575|ENST00000244534|H1-3	76.16968421966216	0.22691431239609447	4				NaN	NaN	0	NaN	774	2207	2980
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2984	12.832	NaN	1844.6	30	0	396.09	0.106	+			39123	SSTSSLAAPG	10	44	439.2161183616199	876.4176837900399	2	439.2166748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSTSSLAAPG_	ENSG00000100346|ENST00000402142|CACNA1I;nc|ENSG00000100346|Q9P0X4-4|CACNA1I	29.14955571784316	0.6417842315402807	4				NaN	NaN	0	NaN	775	2207	2980
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2985	12.834	NaN	2737.3	30	0	442.71	0.106			+	21795	KQVQSILKKQ	10	58	600.3767741812957	1198.7389954293913	2	600.3775024414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KQVQSILKKQ_	REV__ENSG00000151503|ENST00000534548|NCAPD3;REV__ENST00000525964.6_1_11:134022841-134052943:-|nuORF	75.04331003522576	0.23611669241777622	4				NaN	NaN	0	NaN	776	2207	2980
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2986	12.836	NaN	840.51	30	0	97.14	0.037			+	9955	ERDMIKELQ	9	34	581.2976684570312	NaN	0	581.2976684570312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ERDMIKELQ_	REV__ENST00000264167.8_1_2:178364445-178370280:+|nuORF	15.641811463095205	0.38404136392510424	4				NaN	NaN	0	NaN	777	2207	2980
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2987	12.837	NaN	735.22	30	0	118.02	0.14			+	32869	RDELAEKH	8	34	499.2555236816406	NaN	0	499.2555236816406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RDELAEKH_	REV__CARD11|p.R309H|1|0.19|ENSG00000198286|chr7:2938770-2938770|C/T|missense_variant	23.04248740728303	1.7418937515398478	4				NaN	NaN	0	NaN	778	2207	2980
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2999	12.864	NaN	11105	30	0	3072.6	0.214				-1	 	0	62	466.28163103556346	930.548709137927	2	466.28192138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	787	2210	2998
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3000	12.867	NaN	2422	30	0	454.75	0.106	+			14110	GSLNHAASK	9	46	442.7324523925781	NaN	0	442.7324523925781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSLNHAASK_	ENSG00000031698|ENST00000234677|SARS1	99.01295224348159	0.023427377858318825	4				NaN	NaN	0	NaN	788	2210	2998
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3001	12.869	NaN	7038.1	30	0	1413.1	0.106	+			22259	KTATAVAHCK	10	64	543.7892714866815	1085.563990040163	2	543.7902221679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_KTATAVAHC(Carbamidomethyl (C))K_	chr19:39435705-39435848|468|276.17|0.0|24.72|-|0|RPS16,RPS16|1;ENSG00000105193|ENST00000251453|RPS16;ENST00000601390.1_1_19:39926180-39926535:-|nuORF	123.11161354013207	0.02293503976405718	4				NaN	NaN	0	NaN	789	2210	2998
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3002	12.871	NaN	1927.9	30	0	258.6	0.106			+	31959	QQSRAVQAK	9	56	508.28536142153894	1014.5561699098779	2	508.2860107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QQSRAVQAK_	REV__CCDC57|p.A501Hfs*12|1|0.38|ENSG00000176155|chr17:82178479-82178479|C/-|frameshift_variant;REV__ENSG00000176155|ENST00000694881|CCDC57;REV__ENST00000327026.7_1_17:80136426-80141741:-|nuORF;REV__nc|ENSG00000176155|Q2TAC2-2|CCDC57;REV__nc|ENSG00000176155|Q2TAC2|CCDC57	39.252832667884924	0.4290233611298554	4				NaN	NaN	0	NaN	790	2210	2998
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3003	12.873	NaN	8236.4	30	0	3356.4	0.106				-1	 	0	49	456.2322025664122	910.4498521996244	2	456.2325439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	791	2210	2998
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3004	12.875	NaN	9281.7	30	0	1932.8	0.037				-1	 	0	34	376.55088150572305	1126.6308151173691	3	376.5510559082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	792	2210	2998
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3005	12.875	NaN	2751.6	30	0	719.8	0.143	+			33073	REKKTENSKL	10	57	616.8510507469482	1231.6875485606963	2	616.8517456054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_REKKTENSKL_	ENSG00000105835|ENST00000222553|NAMPT;ENST00000393618.5_1_7:105910735-105925330:-|nuORF;ENST00000486949.5_1_7:105912936-105925330:-|nuORF;ENST00000489358.5_1_7:105912543-105925330:-|nuORF;ENST00000489732.1_1_7:105917445-105925330:-|nuORF	92.23892857375223	0.11825556496531454	4				NaN	NaN	0	NaN	793	2210	2998
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3020	12.909	NaN	9930.1	30	0	962.51	0.214				-1	 	0	73	495.76939286596377	989.5242327987276	2	495.76983642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	805	2213	3019
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3021	12.912	NaN	7527.4	30	0	1246.1	0.106	+			22783	KVFEKSRNK	9	76	568.3323416229532	1134.6501303127063	2	568.33349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVFEKSRNK_	ENSG00000164506|ENST00000321680|STXBP5;nc|ENSG00000164506|Q5T5C0-2|STXBP5;nc|ENSG00000164506|Q5T5C0-3|STXBP5	63.42647028704847	0.1850514934184437	4				NaN	NaN	0	NaN	806	2213	3019
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3022	12.914	NaN	21628	30	0	4254.8	0.106	+			4777	ATNGKVLKK	9	82	479.8051319239158	957.5957109146316	2	479.8055419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATNGKVLKK_	ENSG00000115008|ENST00000263339|IL1A	132.757866228626	0.013877640931359021	4				NaN	NaN	0	NaN	807	2213	3019
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3023	12.916	NaN	4953.7	30	0	875.35	0.106	+			2695	AQPESLLRE	9	67	521.7793461895799	1041.5441394459597	2	521.8045043945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AQPESLLRE_	ENST00000550853.1_2_9:136891668-136894151:+|nuORF;ENST00000603928.2_2_9:136893890-136894151:+|nuORF	49.44154591367651	0.3095138337212152	4				NaN	NaN	0	NaN	808	2213	3019
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3024	12.918	NaN	1310.8	30	0	517	0.106			+	-1	FLLFGTCI	8	28	506.7608947753906	NaN	0	506.7608947753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))FLLFGTC(Carbamidomethyl (C))I_	REV__tr|U7SM82|U7SM82_FUSNUShort-chainfattyacidstransporterOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01859PE=4SV=1	14.664097394203935	1.7418937515398478	4				NaN	NaN	0	NaN	809	2213	3019
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3025	12.92	NaN	2080	30	0	518.12	0.036	+			19632	KDKDGQLVR	9	55	529.8010366689982	1057.5875204047964	2	529.8014526367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KDKDGQLVR_	TRIM3|p.R353Q|1|0.32|ENSG00000110171|chr11:6456668-6456668|C/T|missense_variant	74.25504064058377	0.12238981753128622	4				NaN	NaN	0	NaN	810	2213	3019
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3026	12.92	NaN	2115.5	30	0	739.5	0.14			+	31267	QHSAYGPLR	9	46	514.7665622143027	1027.5185714954052	2	514.7676391601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QHSAYGPLR_	REV__ENSG00000170917|ENST00000304430|NUDT6;REV__ENST00000503370.5_1_4:123814341-123838767:-|nuORF;REV__ENST00000513517.1_1_4:123818758-123838869:-|nuORF	49.44154591367651	0.3095138337212152	4				NaN	NaN	0	NaN	811	2213	3019
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3040	12.952	NaN	11609	30	0	5034.4	0.199	+			5345	ATVTKKVAK	9	65	473.3075771579466	944.6006013826932	2	473.3077392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATVTKKVAK_	ENSG00000187837|ENST00000343677|H1-2	82.7504851949679	0.08565546331141553	4				NaN	NaN	0	NaN	822	2216	3039
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3041	12.955	NaN	4381.8	30	0	1901.2	0.106				-1	KTCQEKFKK	9	42	399.55316162109375	NaN	0	399.55316162109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_KTC(Carbamidomethyl (C))QEKFKK_	ENSG00000109180|ENST00000264312|OCIAD1;ENST00000512981.5_1_4:48833247-48854006:+|nuORF;nc|ENSG00000109180|Q9NX40-2|OCIAD1;nc|ENSG00000109180|Q9NX40-3|OCIAD1;nc|ENSG00000109180|Q9NX40-4|OCIAD1;OCIAD1|p.E233Kfs*4|2|0.22|ENSG00000109180|chr4:48857355-48857355|A/-|frameshift_variant	45.97224482568171	0.23445038899310136	4				NaN	NaN	0	NaN	823	2216	3039
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3042	12.957	NaN	1095	30	0	157.53	0.106			+	2490	APRQLARR	8	42	484.29833984375	NaN	0	484.29833984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_APRQLARR_	REV__ENST00000330115.3_1_3:194349151-194354396:-|nuORF	19.359975847455235	1.7418937515398478	4				NaN	NaN	0	NaN	824	2216	3039
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3043	12.959	NaN	1062	30	0	187.88	0.106	+			12383	GDWIFTIR	8	38	504.2682189941406	NaN	0	504.2682189941406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GDWIFTIR_	ENSG00000102572|ENST00000539966|STK24;nc|ENSG00000102572|Q9Y6E0|STK24	16.473147378115264	1.7418937515398478	4				NaN	NaN	0	NaN	825	2216	3039
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3044	12.961	NaN	1594.4	30	0	262.43	0.106			+	19791	KEAPSAGAAKD	11	51	522.7706909179688	NaN	0	522.7706909179688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEAPSAGAAKD_	REV__ENSG00000169918|ENST00000307050|OTUD7A;REV__nc|ENSG00000169918|Q8TE49|OTUD7A	38.753607047826485	0.39270760338352134	4				NaN	NaN	0	NaN	826	2216	3039
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3045	12.963	NaN	860.52	30	0	103.12	0.106			+	21508	KNMFVAKV	8	40	468.7713623046875	NaN	0	468.7713623046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KNMFVAKV_	REV__ENSG00000138604|ENST00000261858|GLCE	26.79610172149135	1.7418937515398478	4				NaN	NaN	0	NaN	827	2216	3039
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3046	12.965	NaN	449.54	30	0	112.65	0.033	+			33250	RGDISEPK	8	30	451.2403259277344	NaN	0	451.2403259277344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RGDISEPK_	ENSG00000006837|ENST00000265334|CDKL3;ENST00000518409.1_1_5:133640182-133644414:-|nuORF;ENST00000520515.5_1_5:133541561-133657575:-|nuORF;ENST00000520693.5_1_5:133622066-133644414:-|nuORF;nc|ENSG00000273345|Q8IVW4-2|CDKL3	17.364965105453717	1.7418937515398478	4				NaN	NaN	0	NaN	828	2216	3039
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3060	12.994	NaN	250860	30	0	33929	0.214	+			33952	RSASSATQVHK	11	161	391.21040677509757	1170.6093909254928	3	391.21075439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RSASSATQVHK_	ENST00000361272.8_2_8:17102747-17104366:-|nuORF	175.3250769318428	1.3930512482767607E-05	4				NaN	NaN	0	NaN	839	2219	3059
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3061	12.998	NaN	14351	30	0	4415.7	0.106	+			3507	ASSKDAIKK	9	75	474.2790312021183	946.5435094710366	2	474.2794494628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASSKDAIKK_	DSTN|p.Y117H|1|0.26|ENSG00000125868|chr20:17604592-17604592|T/C|missense_variant;ENSG00000125868|ENST00000246069|DSTN;ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000400899.2_1_1:11051144-11051557:-|nuORF;ENST00000530945.1_1_11:65623104-65623215:-|nuORF;nc|ENSG00000125868|P60981-2|DSTN;nc|ENSG00000165410|Q9Y281-3|CFL2	109.43880257439609	0.029570636687953285	4				NaN	NaN	0	NaN	840	2219	3059
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3062	13	NaN	4566.7	30	0	1308.2	0.106				-1	 	0	63	495.76939286596377	989.5242327987276	2	496.772705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	841	2219	3059
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3063	13.002	NaN	1307.1	30	0	174.24	0.106				-1	 	0	47	581.3319227538307	580.3246462872306	1	581.3329467773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	842	2219	3059
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3064	13.003	NaN	1195.8	30	0	186.61	0.106				-1	QMAGCLEHC	9	40	524.7046100654096	NaN	0	524.803955078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_QMAGC(Carbamidomethyl (C))LEHC_	ENST00000578759.1_1_17:60217316-60217976:-|nuORF	23.04248740728303	0.3589936788096251	4				NaN	NaN	0	NaN	843	2219	3059
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3065	13.005	NaN	4636.4	30	0	2588.8	0.106	+			43698	TKISRGTTE	9	39	331.51725941188016	991.5299488358405	3	331.5176696777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TKISRGTTE_	ENST00000459899.1_1_14:35857513-35858113:-|nuORF	23.04248740728303	0.5879033540491928	4				NaN	NaN	0	NaN	844	2219	3059
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3066	13.007	NaN	2077.8	30	0	611.12	0.037	+			23439	LADFPGLPWK	10	39	572.3145225671893	1142.6144922011786	2	572.3156127929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LADFPGLPWK_	ENST00000409161.5_1_11:70508092-70508251:-|nuORF	27.047317107675042	0.6589519614906109	4				NaN	NaN	0	NaN	845	2219	3059
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3079	13.035	NaN	46570	30	0	6686.4	0.214				-1	 	0	92	467.2710811089594	932.5276092847188	2	467.27142333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	855	2222	3078
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3080	13.038	NaN	5891.7	30	0	651.97	0.106	+			40609	SVAKETARR	9	75	509.2933624165316	NaN	0	509.29339599609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVAKETARR_	ENSG00000143553|ENST00000368685|SNAPIN;ENST00000478558.1_1_1:153631742-153633774:+|nuORF	93.5975768576971	0.03434413464716124	4				NaN	NaN	0	NaN	856	2222	3078
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3081	13.04	NaN	21823	30	0	5491.7	0.106			+	21028	KKKGCRLVS	9	73	538.3230828645194	1074.6316127958387	2	538.3241577148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_KKKGC(Carbamidomethyl (C))RLVS_	REV__chr17:39202445-39202994|380|13.56|0.73|4.21|+|ENST00000678012|RPL19,RPL19;REV__ENSG00000108298|ENST00000225430|RPL19;REV__ENST00000580333.1_1_17:37356597-37358721:+|nuORF	116.90359126533652	0.02307425081617795	4				NaN	NaN	0	NaN	857	2222	3078
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3082	13.042	NaN	29848	30	0	12173	0.106			+	-1	KKGMIQARK	9	61	359.21758490152985	1074.6309253047896	3	359.2182312011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_KKGM(Oxidation (M))IQARK_	REV__ENST00000505525.1_1_4:84380895-84382208:+|nuORF	54.776311868738084	0.25715957988447635	4				NaN	NaN	0	NaN	858	2222	3078
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3083	13.044	NaN	5076.6	30	0	2138.5	0.106	+			32517	QVQPVSRKK	9	64	535.3270974295739	1068.6396419259477	2	535.3280639648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QVQPVSRKK_	ENSG00000157456|ENST00000288207|CCNB2	104.01359247289065	0.03510646158778409	4				NaN	NaN	0	NaN	859	2222	3078
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3084	13.045	NaN	1576.7	30	0	340.88	0.038	+			33041	REKEEQKKL	9	49	594.3403178738533	1186.6660828145066	2	594.34130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_REKEEQKKL_	ENSG00000198730|ENST00000361367|CTR9;ENST00000529898.1_1_11:10794082-10795717:+|nuORF	60.1669710687717	0.2122228167747824	4				NaN	NaN	0	NaN	860	2222	3078
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3085	13.046	NaN	884.72	30	0	171.18	0.14			+	50361	WVQNSISKVE	10	42	397.2134704589844	NaN	0	397.2134704589844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_WVQNSISKVE_	REV__ENSG00000083067|ENST00000677713|TRPM3;REV__ENSG00000134160|ENST00000256552|TRPM1;REV__nc|ENSG00000083067|Q9HCF6-10|TRPM3;REV__nc|ENSG00000083067|Q9HCF6-11|TRPM3;REV__nc|ENSG00000083067|Q9HCF6-2|TRPM3;REV__nc|ENSG00000083067|Q9HCF6-4|TRPM3;REV__nc|ENSG00000083067|Q9HCF6-5|TRPM3;REV__nc|ENSG00000083067|Q9HCF6-6|TRPM3;REV__nc|ENSG00000083067|Q9HCF6-7|TRPM3;REV__nc|ENSG00000083067|Q9HCF6-8|TRPM3;REV__nc|ENSG00000083067|Q9HCF6|TRPM3;REV__nc|ENSG00000134160|Q7Z4N2-2|TRPM1;REV__nc|ENSG00000134160|Q7Z4N2-3|TRPM1;REV__nc|ENSG00000134160|Q7Z4N2-5|TRPM1;REV__nc|ENSG00000134160|Q7Z4N2|TRPM1;REV__TRPM3|p.S1466Ffs*8|1|0.04|ENSG00000083067|chr9:70536682-70536683|-/CGTTCCAAAA|frameshift_variant	27.047317107675042	0.41136583337917604	4				NaN	NaN	0	NaN	861	2222	3078
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3099	13.078	NaN	12121	30	0	3884.7	0.214	+			47277	VMVFTSINK	9	73	519.7867801822002	1037.5590074312004	2	519.7882080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VMVFTSINK_	tr|U7SM98|U7SM98_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01874PE=4SV=1	82.30502934623384	0.08758161712619916	4				NaN	NaN	0	NaN	872	2225	3098
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3100	13.081	NaN	5805	30	0	552.75	0.106				-1	CLTVPRYK	8	69	346.1920708285786	1035.5543830859358	3	346.861083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_C(Carbamidomethyl (C))LTVPRYK_	ENSG00000108854|ENST00000262435|SMURF2;ENST00000582081.5_1_17:62541968-62590137:-|nuORF	30.503639358989545	0.7238069182250283	4				NaN	NaN	0	NaN	873	2225	3098
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3101	13.083	NaN	4725.2	30	0	1322.6	0.106			+	1664	AGQTHRSSR	9	68	500.25713401706065	998.4997151009213	2	500.2572326660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AGQTHRSSR_	REV__ENSG00000277363|ENST00000617146|SRCIN1;REV__SRCIN1|p.K846Rfs*3|1|0.3|ENSG00000277363|chr17:38552078-38552078|G/-|frameshift_variant;REV__SRCIN1|p.P868Rfs*2|1|0.47|ENSG00000277363|chr17:38552010-38552010|G/-|frameshift_variant;REV__SRCIN1|p.S866Afs*4|3|0.35|ENSG00000277363|chr17:38552018-38552018|G/-|frameshift_variant	54.776311868738084	0.25715957988447635	4				NaN	NaN	0	NaN	874	2225	3098
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3102	13.085	NaN	1899.7	30	0	328.02	0.106	+			5752	AVGKNKRLTK	10	42	557.8557035913998	1113.6968542495995	2	557.8564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVGKNKRLTK_	ENSG00000145425|ENST00000274065|RPS3A;ENST00000507485.1_1_4:152020792-152024033:+|nuORF	35.15202426646627	0.5927656479315102	4				NaN	NaN	0	NaN	875	2225	3098
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3103	13.087	NaN	805.48	30	0	222.13	0.106			+	21683	KQEHSITL	8	37	478.26208338787524	954.5096138425505	2	478.2623596191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KQEHSITL_	REV__ENST00000596960.1_1:149575518-149575569:+|nuORF	33.51558372728122	0.7005509609380386	4				NaN	NaN	0	NaN	876	2225	3098
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3104	13.089	NaN	725.01	30	0	168.36	0.036			+	-1	NEHCIVCPE	9	33	550.7305908203125	NaN	0	550.7305908203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_NEHC(Carbamidomethyl (C))IVCPE_	REV__ENSG00000198919|ENST00000361582|DZIP3	25.57405402267927	0.3484490411150625	4				NaN	NaN	0	NaN	877	2225	3098
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3105	13.089	NaN	1470.2	30	0	190.55	0.14	+			9874	EQHKRIHT	8	60	524.7857666015625	NaN	0	524.7857666015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EQHKRIHT_	ENSG00000196670|ENST00000502412|ZFP62;nc|ENSG00000278970|Q8NB50-3|ZFP62	37.15910966729921	1.7418937515398478	4				NaN	NaN	0	NaN	878	2225	3098
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3120	13.122	NaN	6036.5	30	0	1055.7	0.215	+			46790	VHKEKGANK	9	73	505.79013071700035	1009.5657085008007	2	505.79071044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VHKEKGANK_	ENSG00000005889|ENST00000304543|ZFX;ENSG00000067646|ENST00000155093|ZFY;nc|ENSG00000005889|P17010-2|ZFX;nc|ENSG00000005889|P17010-3|ZFX;nc|ENSG00000067646|P08048-2|ZFY;nc|ENSG00000067646|P08048-3|ZFY;ZFY|p.M685Cfs*17|2|0.62|ENSG00000067646|chrY:2979634-2979634|A/-|frameshift_variant	46.45678178249821	0.34452392205506005	4				NaN	NaN	0	NaN	890	2228	3119
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3121	13.126	NaN	58858	30	0	8372.6	0.106				-1	 	0	107	438.7479508578496	875.4813487824993	2	438.7483215332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	891	2228	3119
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3122	13.128	NaN	2162	30	0	785.78	0.106	+			22911	KVNEIAKHK	9	60	533.8214831341634	1065.6284133351267	2	533.8224487304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KVNEIAKHK_	ENSG00000175203|ENST00000548249|DCTN2;ENST00000550988.5_1_12:57926276-57926769:-|nuORF;nc|ENSG00000175203|Q13561-2|DCTN2;nc|ENSG00000175203|Q13561-3|DCTN2	51.19269402634007	0.2889735674168909	4				NaN	NaN	0	NaN	892	2228	3119
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3123	13.13	NaN	2229.5	30	0	502.03	0.106				-1	 	0	48	337.52898498594925	1009.5651255580478	3	337.5295104980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	893	2228	3119
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3124	13.132	NaN	4957.1	30	0	1987.9	0.106				-1	ATSLPQTVVM	10	40	354.8555415648949	1061.5447952948848	3	354.8560485839844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_ATSLPQTVVM(Oxidation (M))_	ATF1|p.T261Lfs*2|1|0.16|ENSG00000123268|chr12:50819740-50819740|A/-|frameshift_variant;ENSG00000123268|ENST00000262053|ATF1;nc|ENSG00000123268|P18846-2|ATF1	23.52269567125451	0.6877354443478558	4				NaN	NaN	0	NaN	894	2228	3119
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3125	13.133	NaN	981.01	30	0	164.92	0.035				-1	MAVPPKYR	8	33	326.5131165527265	976.5175202583796	3	326.5135498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_M(Oxidation (M))AVPPKYR_	DBR1|p.S224Lfs*6|1|0.26|ENSG00000138231|chr3:138167125-138167125|A/-|frameshift_variant;DBR1|p.Y142Lfs*2|1|0.38|ENSG00000138231|chr3:138170173-138170174|-/G|frameshift_variant;ENSG00000138231|ENST00000260803|DBR1;ENST00000463982.2_1_3:137890290-137893637:-|nuORF	18.324413293986947	0.7971860551947066	4				NaN	NaN	0	NaN	895	2228	3119
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3126	13.134	NaN	12377	30	0	1966.4	0.139				-1	AGEMGHRNS	9	69	487.70854125637027	973.4025295795406	2	487.70880126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_AGEM(Oxidation (M))GHRNS_	ENST00000575838.1_1_16:69761062-69776276:+|nuORF	30.503639358989545	0.5181749237905803	4				NaN	NaN	0	NaN	896	2228	3119
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3142	13.169	NaN	13528	30	0	4085.5	0.214				-1	MGRTCVRTP	9	49	359.84845149181984	1076.5235250756596	3	359.848876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_MGRTC(Carbamidomethyl (C))VRTP_	ENST00000396987.7_1_8:41479072-41479165:+|nuORF	31.529811441608018	0.5085848003137583	4				NaN	NaN	0	NaN	909	2231	3141
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3143	13.173	NaN	13225	30	0	2772.1	0.106	+			22620	KTTTATATPK	10	74	510.28970528791774	1018.5648576426355	2	510.2903137207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTTTATATPK_	ENST00000262126.8_1_18:9136811-9136937:+|nuORF	109.82975700811294	0.04850514657194457	4				NaN	NaN	0	NaN	910	2231	3141
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3144	13.175	NaN	14085	30	0	2238	0.106				-1	 	0	85	452.7453487182239	903.4761445032478	2	452.7456359863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	911	2231	3141
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3145	13.177	NaN	2268.7	30	0	715.5	0.106	+			15082	GTQAPPRRPG	10	42	346.1920708285786	1035.5543830859358	3	346.1925048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTQAPPRRPG_	ENST00000566104.1_1_16:67189803-67193780:-|nuORF	27.047317107675042	0.6589519614906109	4				NaN	NaN	0	NaN	912	2231	3141
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3146	13.178	NaN	2658.3	30	0	539.63	0.106			+	-1	SVGFMTKL	8	53	449.7389350780314	NaN	0	449.7386779785156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_SVGFM(Oxidation (M))TKL_	REV__ENSG00000176402|ENST00000312891|GJC3	33.51558372728122	1.7418937515398478	4				NaN	NaN	0	NaN	913	2231	3141
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3147	13.18	NaN	5236.4	30	0	1054.7	0.037			+	24373	LFRLPAWPQ	9	54	564.3222640041217	1126.6299750750434	2	564.3234252929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LFRLPAWPQ_	REV__ENST00000461013.5_1_5:131713711-131714174:+|nuORF	19.996771675451527	0.6112419832031292	4				NaN	NaN	0	NaN	914	2231	3141
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3148	13.181	NaN	2292.2	30	0	353.12	0.14			+	18008	IIFFLCAGL	9	59	498.7825012207031	NaN	0	498.7825012207031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IIFFLCAGL_	REV__ENST00000335793.3_1_17:71280809-71281388:-|nuORF	49.21078951299608	0.21213183292994464	4				NaN	NaN	0	NaN	915	2231	3141
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3163	13.212	NaN	210640	30	0	94271	0.082	+			35460	SASSATQVHK	10	70	339.1764898005827	1014.5076400019482	3	339.1772155761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SASSATQVHK_	ENST00000361272.8_2_8:17102747-17104366:-|nuORF	84.81729255234993	0.1607459278640679	4				NaN	NaN	0	NaN	927	2234	3162
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3164	13.214	NaN	107240	30	0	68732	0.05			+	29679	PGRSKRRL	8	54	323.87400415817194	968.6001830747159	3	323.8745422363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PGRSKRRL_	REV__ENST00000590714.1_1_19:56110838-56111102:-|nuORF	26.79610172149135	0.7524337208463756	4				NaN	NaN	0	NaN	928	2234	3162
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3165	13.215	NaN	111470	30	0	80878	0.106	+			4852	ATPKKTVPK	9	48	485.3075734542493	968.6005939752986	2	485.30780029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATPKKTVPK_	ENSG00000166197|ENST00000605788|NOLC1;nc|ENSG00000166197|Q14978-3|NOLC1	101.60071028292904	0.0375685401170269	4				NaN	NaN	0	NaN	929	2234	3162
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3166	13.217	NaN	14403	30	0	1747.3	0.106				-1	 	0	79	333.173035852405	996.497278157415	3	333.173583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	930	2234	3162
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3167	13.219	NaN	11069	30	0	1691.3	0.106				-1	 	0	61	429.2267839445546	856.4390149559092	2	429.2272033691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	931	2234	3162
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3168	13.22	NaN	16656	30	0	8637.9	0.106				-1	AVCGKVKCK	9	46	350.5239462970429	1048.5500094913289	3	350.52459716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Carbamidomethyl (C)	_AVC(Carbamidomethyl (C))GKVKC(Carbamidomethyl (C))K_	ENSG00000135317|ENST00000314673|SNX14;ENST00000508980.5_1_6:86270935-86284080:-|nuORF;nc|ENSG00000135317|Q9Y5W7-2|SNX14;nc|ENSG00000135317|Q9Y5W7-3|SNX14;nc|ENSG00000135317|Q9Y5W7-4|SNX14;SNX14|p.F173Lfs*5|3|0.42|ENSG00000135317|chr6:85565362-85565362|A/-|frameshift_variant	40.77816245573522	0.41113185337114944	4				NaN	NaN	0	NaN	932	2234	3162
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3169	13.222	NaN	8519.7	30	0	1404.4	0.106	+			44681	TTHVTKTVK	9	72	507.7997703473327	1013.5849877614654	2	507.8005676269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TTHVTKTVK_	ENSG00000088367|ENST00000338074|EPB41L1;nc|ENSG00000088367|Q9H4G0-2|EPB41L1;nc|ENSG00000088367|Q9H4G0-3|EPB41L1;nc|ENSG00000088367|Q9H4G0-4|EPB41L1	93.1432384553994	0.056003526918089595	4				NaN	NaN	0	NaN	933	2234	3162
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3170	13.224	NaN	4347.9	30	0	1031.2	0.032			+	12194	GAPLKIAK	8	51	399.26553021410274	796.5165074950055	2	399.2657775878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_GAPLKIAK_	REV__nc|ENSG00000011347|O43581|SYT7	62.97842346883844	0.4722955155785405	4				NaN	NaN	0	NaN	934	2234	3162
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3188	13.261	NaN	35592	30	0	5678.4	0.214	+			1002	AEKKTKQTL	9	87	523.8132689197271	1045.611984906254	2	523.8140869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEKKTKQTL_	ENSG00000165525|ENST00000298310|NEMF;ENST00000556925.5_1_14:50285084-50295410:-|nuORF;ENST00000557380.5_1_14:50292586-50301128:-|nuORF;nc|ENSG00000165525|O60524-3|NEMF;nc|ENSG00000165525|O60524-4|NEMF;nc|ENSG00000165525|O60524-5|NEMF;NEMF|p.K641Rfs*9|1|0.15|ENSG00000165525|chr14:49802721-49802721|T/-|frameshift_variant;NEMF|p.M879*|1|0.12|ENSG00000165525|chr14:49789558-49789558|T/-|frameshift_variant;NEMF|p.M879Nfs*10|1|0.13|ENSG00000165525|chr14:49789557-49789558|-/T|frameshift_variant	148.6902309647307	0.00717441509122429	4				NaN	NaN	0	NaN	949	2237	3187
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3189	13.264	NaN	76195	30	0	18225	0.106	+			32798	RATKPTVQK	9	118	343.54460614157097	1027.6119890249129	3	343.545166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RATKPTVQK_	ENST00000263196.11_1_22:19055732-19076988:-|nuORF	66.96192283764107	0.15557981141143568	4				NaN	NaN	0	NaN	950	2237	3187
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3190	13.266	NaN	2962.5	30	0	420.34	0.106	+			36374	SETGAGKHV	9	54	443.2244336865829	884.4343144399659	2	443.22467041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SETGAGKHV_	ENSG00000075886|ENST00000321253|TUBA3D;ENSG00000123416|ENST00000336023|TUBA1B;ENSG00000152086|ENST00000312988|TUBA3E;ENSG00000167552|ENST00000301071|TUBA1A;ENSG00000167553|ENST00000301072|TUBA1C;ENSG00000198033|ENST00000400113|TUBA3C;ENST00000530835.1_1_11:90015825-90016947:+|nuORF;ENST00000548363.1_1_12:49580068-49582762:-|nuORF;ENST00000550254.1_1_12:49580073-49582762:-|nuORF;ENST00000551324.5_1_12:49523262-49525083:-|nuORF;nc|ENSG00000123416|P68363-2|TUBA1B;nc|ENSG00000167552|Q71U36-2|TUBA1A;nc|ENSG00000198033|P0DPH7-2|TUBA3C;TUBA3C|p.G144Afs*24|1|0.32|ENSG00000198033|chr13:19177554-19177554|A/-|frameshift_variant;TUBA3C|p.T361Rfs*18|1|0.17|ENSG00000198033|chr13:19174136-19174136|G/-|frameshift_variant;TUBA3D|p.G366Efs*13|1|0.17|ENSG00000075886|chr2:131482588-131482588|G/-|frameshift_variant;TUBA3D|p.V328Pfs*54|1|0.45|ENSG00000075886|chr2:131480665-131480666|-/CCCAAAGA|frameshift_variant;TUBA3E|p.Q176Rfs*14|1|0.58|ENSG00000152086|chr2:130194316-130194316|G/-|frameshift_variant	51.33545320467046	0.2872990594074956	4				NaN	NaN	0	NaN	951	2237	3187
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3191	13.268	NaN	20126	30	0	4228.5	0.106	+			6253	AVSKEVTRK	9	78	509.3054070162616	1016.5962610993232	2	509.30615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVSKEVTRK_	ENSG00000114850|ENST00000265044|SSR3;ENST00000467733.1_1_3:156262080-156272878:-|nuORF;ENST00000498205.5_1_3:156260994-156266845:-|nuORF;nc|ENSG00000114850|Q9UNL2-2|SSR3	104.01359247289065	0.03510646158778409	4				NaN	NaN	0	NaN	952	2237	3187
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3192	13.27	NaN	3833.8	30	0	658	0.106				-1	 	0	52	349.54447112457933	1045.611583973938	3	349.54498291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	953	2237	3187
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3193	13.272	NaN	9268.5	30	0	1298	0.034				-1	 	0	60	487.23239091313104	972.4502288930621	2	487.23260498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	954	2237	3187
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3194	13.272	NaN	3054.7	30	0	1009.7	0.14			+	30838	QEFTLIKR	8	61	517.8045156721315	1033.594478411063	2	517.8051147460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QEFTLIKR_	REV__ENSG00000166012|ENST00000448108|TAF1D	60.97194046774394	0.49215940876911696	4				NaN	NaN	0	NaN	955	2237	3187
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3210	13.307	NaN	23822	30	0	4977.7	0.214	+			40429	STVKENMKK	9	80	532.7906120283141	1063.566671123428	2	532.7923583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STVKENMKK_	ENST00000590996.5_2_17:41329998-41338351:+|nuORF	159.27591364854348	0.004707062175358555	4				NaN	NaN	0	NaN	968	2240	3209
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3211	13.31	NaN	20871	30	0	12680	0.106			+	32684	RAGAQAGPLLP	11	71	525.8053813631115	NaN	0	525.805419921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RAGAQAGPLLP_	REV__KCNG1|p.L244Tfs*274|1|0.11|ENSG00000026559|chr20:51009609-51009610|-/CACCTTTCAAAATGTCAGCCGCTGACAGGAATGGTTGTTTTCCTATATGCAATGT|frameshift_variant	56.72105179125745	0.2643439005903171	4				NaN	NaN	0	NaN	969	2240	3209
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3212	13.312	NaN	15494	30	0	3472.9	0.106	+			40430	STVKENMKK	9	68	355.5299746360238	1063.5680945082713	3	355.5304870605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STVKENMKK_	ENST00000590996.5_2_17:41329998-41338351:+|nuORF	39.252832667884924	0.4290233611298554	4				NaN	NaN	0	NaN	970	2240	3209
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3213	13.314	NaN	28395	30	0	7354.4	0.106			+	45062	TVHHIIGNE	9	74	510.26682260542634	1018.5190922776527	2	510.2671203613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TVHHIIGNE_	REV__ENSG00000046889|ENST00000288368|PREX2;REV__ENST00000517617.1_1_8:68864752-69023167:+|nuORF;REV__ENST00000529398.5_1_8:68864629-69017594:+|nuORF;REV__nc|ENSG00000046889|Q70Z35-3|PREX2;REV__nc|ENSG00000046889|Q70Z35-4|PREX2;REV__PREX2|p.S552Kfs*6|1|0.33|ENSG00000046889|chr8:68080448-68080449|-/A|frameshift_variant;REV__PREX2|p.S565Rfs*10|1|0.31|ENSG00000046889|chr8:68080486-68080486|T/-|frameshift_variant	84.9155231211612	0.07920012719736333	4				NaN	NaN	0	NaN	971	2240	3209
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3214	13.316	NaN	10447	30	0	2502.9	0.106	+			9355	EISELQPSSH	10	62	563.7738236646451	1125.53309439609	2	563.7752075195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EISELQPSSH_	ENST00000503848.5_1_5:145435703-145442068:+|nuORF	40.05817265558897	0.5486090488315611	4				NaN	NaN	0	NaN	972	2240	3209
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3215	13.318	NaN	7667.4	30	0	1067.3	0.035	+			32799	RATKPTVQK	9	71	514.8135467082668	1027.6125404833335	2	514.814208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RATKPTVQK_	ENST00000263196.11_1_22:19055732-19076988:-|nuORF	70.8162118820467	0.13725933411854815	4				NaN	NaN	0	NaN	973	2240	3209
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3216	13.318	NaN	4448.9	30	0	2988.9	0.141				-1	MLLPPCVTF	9	46	547.2754844678674	1092.5364160025347	2	547.2763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))LLPPC(Carbamidomethyl (C))VTF_	ENST00000254806.7_2_17:73842232-73842808:-|nuORF	18.324413293986947	0.6112419832031293	4				NaN	NaN	0	NaN	974	2240	3209
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3235	13.359	NaN	11698	30	0	3680.7	0.214	+			19729	KDTSKIKQ	8	72	474.2790312021183	946.5435094710366	2	474.2793884277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KDTSKIKQ_	ENST00000414939.1_1_10:18944066-18947184:-|nuORF;ENST00000449529.1_1_10:18944066-18948134:-|nuORF	74.25504064058377	0.37144338840759816	4				NaN	NaN	0	NaN	990	2243	3234
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3236	13.363	NaN	11286	30	0	1842.3	0.106	+			13934	GRSGPILK	8	70	414.2580204941775	826.501488055155	2	414.25848388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GRSGPILK_	ENST00000301905.8_1_8:27690647-27695270:-|nuORF;ENST00000522944.5_1_8:27690613-27695270:-|nuORF	27.882242232435846	0.7440473649773525	4				NaN	NaN	0	NaN	991	2243	3234
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3237	13.365	NaN	7676.2	30	0	1425.2	0.106				-1	 	0	60	450.74794001598445	899.4813270987689	2	450.7484436035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	992	2243	3234
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3238	13.366	NaN	1307.3	30	0	195.93	0.106			+	20336	KERIHVEQ	8	45	519.7867801822002	1037.5590074312004	2	520.2860717773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KERIHVEQ_	REV__ENSG00000197385|ENST00000360311|ZNF860	47.657333605630114	0.6087971902037268	4				NaN	NaN	0	NaN	993	2243	3234
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3239	13.368	NaN	3851.3	30	0	603.01	0.106	+			45771	VAGAATPKK	9	49	421.7579409964826	841.5013290597652	2	421.7582702636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VAGAATPKK_	ENSG00000124575|ENST00000244534|H1-3	118.74307786436346	0.02196067127630568	4				NaN	NaN	0	NaN	994	2243	3234
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3240	13.37	NaN	5526.3	30	0	970.01	0.038				-1	 	0	71	621.8191722214805	1241.6237915097608	2	621.8198852539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	995	2243	3234
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3254	13.4	NaN	10186	30	0	1466.7	0.214	+			3089	ASGGAKELK	9	65	430.74528853836136	NaN	0	430.7452697753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASGGAKELK_	ENSG00000197102|ENST00000360184|DYNC1H1;ENST00000555062.1_1_14:102514125-102516009:+|nuORF	154.1183686248401	0.005714644813043012	4				NaN	NaN	0	NaN	1006	2246	3253
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3255	13.403	NaN	10348	30	0	1247	0.106			+	-1	QDHNNCRKQ	9	76	600.2726415681211	1198.5307302030421	2	600.2734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_QDHNNC(Carbamidomethyl (C))RKQ_	REV__ADAM21|p.L684Cfs*3|4|0.25|ENSG00000139985|chr14:70459544-70459544|T/-|frameshift_variant;REV__ENSG00000139985|ENST00000603540|ADAM21;REV__ENST00000529267.2_1_14:70712472-70713909:-|nuORF	58.78195531508484	0.22376836668196862	4				NaN	NaN	0	NaN	1007	2246	3253
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3256	13.405	NaN	73412	30	0	5032.7	0.106			+	-1	MDYREKDAV	9	98	571.7614354809732	1141.5083180287463	2	571.7627563476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))DYREKDAV_	REV__ADAM9|p.V220A|1|0.33|ENSG00000168615|chr8:39018905-39018905|T/C|missense_variant	79.45101966838831	0.09992237243120712	4				NaN	NaN	0	NaN	1008	2246	3253
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3257	13.407	NaN	9133.2	30	0	1628	0.106				-1	 	0	65	452.75796711432815	903.5013812954563	2	452.7581787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1009	2246	3253
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3258	13.409	NaN	2093.9	30	0	214.54	0.106	+			39170	SSYGEHPKR	9	60	530.7617689164282	1059.5089848996563	2	530.7625732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSYGEHPKR_	ENSG00000070495|ENST00000397625|JMJD6;nc|ENSG00000070495|Q6NYC1-2|JMJD6;nc|ENSG00000070495|Q6NYC1-3|JMJD6	47.95952297671804	0.32689736945648856	4				NaN	NaN	0	NaN	1010	2246	3253
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3259	13.411	NaN	20687	30	0	5028.7	0.039			+	-1	PCQPCRRARV	10	72	414.88184779600044	1241.6237139882014	3	414.8821105957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_PCQPC(Carbamidomethyl (C))RRARV_	REV__DCBLD2|p.K459Lfs*3|1|0.04|ENSG00000057019|chr3:98811543-98811544|-/ATGTTAA|frameshift_variant;REV__ENSG00000057019|ENST00000326840|DCBLD2;REV__nc|ENSG00000057019|Q96PD2-2|DCBLD2	30.317721548370564	0.6322445173429027	4				NaN	NaN	0	NaN	1011	2246	3253
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3260	13.411	NaN	6522.8	30	0	1033.3	0.141	+			41772	SVSPASAGKRK	11	71	544.3138116610999	1086.6130703889996	2	544.3151245117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVSPASAGKRK_	ENSG00000147649|ENST00000336273|MTDH;MTDH|p.K447Rfs*19|1|0.29|ENSG00000147649|chr8:97713722-97713722|A/-|frameshift_variant;MTDH|p.N505Ifs*18|1|0.48|ENSG00000147649|chr8:97719178-97719178|A/-|frameshift_variant	83.6470233535746	0.12478191950840195	4				NaN	NaN	0	NaN	1012	2246	3253
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3274	13.443	NaN	12991	30	0	1752.8	0.214	+			33046	REKEKEKEL	9	79	594.8321777309582	1187.6498025287162	2	594.8329467773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_REKEKEKEL_	DHX15|p.T231Pfs*6|1|0.27|ENSG00000109606|chr4:24570664-24570664|T/-|frameshift_variant;ENSG00000109606|ENST00000336812|DHX15	89.02883481214508	0.06760336634167786	4				NaN	NaN	0	NaN	1023	2249	3273
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3275	13.447	NaN	5557.8	30	0	1865.3	0.106			+	36404	SETLPASSYST	11	53	381.5105850096601	1141.5099256291803	3	381.51092529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SETLPASSYST_	REV__ENSG00000175820|ENST00000322527|CCDC168	35.17822180527639	0.6208003396870814	4				NaN	NaN	0	NaN	1024	2249	3273
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3276	13.448	NaN	1412.4	30	0	154.84	0.106			+	31132	QGDLRVLGDG	10	52	515.2692919548153	1028.5240309764306	2	515.2702026367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QGDLRVLGDG_	REV__ENSG00000102802|ENST00000380482|MEDAG	44.377184641726394	0.5088115166961078	4				NaN	NaN	0	NaN	1025	2249	3273
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3277	13.45	NaN	4047.4	30	0	758.65	0.106	+			3976	ATATTSTATSK	11	57	520.2660253326499	1038.5174977320996	2	520.2667846679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATATTSTATSK_	ENSG00000064393|ENST00000406875|HIPK2;nc|ENSG00000064393|Q9H2X6-2|HIPK2;nc|ENSG00000064393|Q9H2X6-3|HIPK2	79.07001860377117	0.16012584326255155	4				NaN	NaN	0	NaN	1026	2249	3273
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3278	13.452	NaN	3598.3	30	0	1271.2	0.106				-1	KGFPVLSKM	9	41	341.5289215391681	1021.5649352177043	3	341.5294494628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_KGFPVLSKM(Oxidation (M))_	ENSG00000100462|ENST00000324366|PRMT5;nc|ENSG00000100462|O14744-2|PRMT5;nc|ENSG00000100462|O14744-3|PRMT5;nc|ENSG00000100462|O14744-5|PRMT5	23.52269567125451	0.5834155526130771	4				NaN	NaN	0	NaN	1027	2249	3273
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3279	13.454	NaN	1220	30	0	187.1	0.036			+	6977	CPTVLTMGKA	10	46	539.2755737304688	NaN	0	539.2755737304688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_C(Carbamidomethyl (C))PTVLTMGKA_	REV__DHX9|p.L1065Cfs*20|1|0.41|ENSG00000135829|chr1:182883563-182883563|C/-|frameshift_variant	47.657333605630114	0.3204131577145918	4				NaN	NaN	0	NaN	1028	2249	3273
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3280	13.454	NaN	566.88	30	0	140.71	0.14				-1	LLFCSSVP	8	26	461.73846371844087	921.4623745036818	2	462.698974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_LLFC(Carbamidomethyl (C))SSVP_	ENST00000491144.5_1_3:183855641-183858240:+|nuORF	13.775330524044264	0.789990904165365	4				NaN	NaN	0	NaN	1029	2249	3273
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3294	13.486	NaN	7908.1	30	0	1207.3	0.214	+			98	AADKRSKAL	9	63	480.28454029302515	958.5545276528503	2	480.2849426269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AADKRSKAL_	ENSG00000156411|ENST00000286953|ATP5MJ;nc|ENSG00000156411|P56378-2|ATP5MJ	60.11826168202944	0.21262886028301267	4				NaN	NaN	0	NaN	1040	2252	3293
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3295	13.49	NaN	9030.2	30	0	1443.3	0.106	+			5240	ATVASSTQK	9	57	446.73988499773344	891.4652170622669	2	446.7401428222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATVASSTQK_	ENSG00000184640|ENST00000427177|SEPTIN9;nc|ENSG00000184640|Q9UHD8-2|SEPTIN9;nc|ENSG00000184640|Q9UHD8-5|SEPTIN9;nc|ENSG00000184640|Q9UHD8-7|SEPTIN9	143.8867514904718	0.008656634767784652	4				NaN	NaN	0	NaN	1041	2252	3293
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3296	13.492	NaN	9520.2	30	0	1759.9	0.106	+			26817	LVSSTGAK	8	55	381.7212508385599	761.4279487439198	2	381.7213134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LVSSTGAK_	ENSG00000166828|ENST00000300061|SCNN1G;SCNN1G|p.H439Sfs*28|1|0.07|ENSG00000166828|chr16:23212696-23212697|-/CTCTG|frameshift_variant;SCNN1G|p.K626Qfs*23|1|0.1|ENSG00000166828|chr16:23215388-23215389|-/C|frameshift_variant	60.97194046774394	0.49215940876911696	4				NaN	NaN	0	NaN	1042	2252	3293
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3297	13.493	NaN	14822	30	0	3689.2	0.106				-1	 	0	78	486.7517156641404	971.4888783950809	2	486.7519226074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1043	2252	3293
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3298	13.495	NaN	8407.3	30	0	1366	0.106	+			16328	HEKQEKGTL	9	62	535.2849423940306	1068.5553318548612	2	535.2858276367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HEKQEKGTL_	ENSG00000121931|ENST00000369763|LRIF1;nc|ENSG00000121931|Q5T3J3-2|LRIF1	80.45461616416974	0.09558281504443908	4				NaN	NaN	0	NaN	1044	2252	3293
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3299	13.497	NaN	3190.4	30	0	291.54	0.036				-1	FKYKCIDK	8	60	551.2916639451313	NaN	0	551.291748046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_FKYKC(Carbamidomethyl (C))IDK_	tr|U7SUG2|U7SUG2_FUSNUAcylcarrierproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01144PE=4SV=1	39.252832667884924	1.7418937515398478	4				NaN	NaN	0	NaN	1045	2252	3293
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3300	13.498	NaN	15417	30	0	1961.5	0.14	+			48022	VSRIADSEK	9	73	502.77165794581055	1003.5287629584211	2	502.7722473144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VSRIADSEK_	ENSG00000134444|ENST00000644646|RELCH;ENST00000592479.5_1_18:59895775-59902130:+|nuORF;nc|ENSG00000134444|Q9P260-2|RELCH;nc|ENSG00000134444|Q9P260|RELCH	87.69643885390035	0.07135982304947239	4				NaN	NaN	0	NaN	1046	2252	3293
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3313	13.527	NaN	9347.2	30	0	1596.8	0.214	+			22464	KTLSPRTLQ	9	68	522.3134001554189	1042.6122473776377	2	522.314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTLSPRTLQ_	ENSG00000148120|ENST00000375315|AOPEP;ENST00000460573.5_1_9:97767442-97823116:+|nuORF;ENST00000463372.5_1_9:97767418-97844994:+|nuORF;ENST00000468164.1_1_9:97818730-97844994:+|nuORF;nc|ENSG00000148120|Q8N6M6-2|AOPEP;nc|ENSG00000148120|Q8N6M6-4|AOPEP	74.1650062923329	0.12277912660386392	4				NaN	NaN	0	NaN	1056	2255	3312
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3314	13.53	NaN	2585.9	30	0	549.96	0.106				-1	ERECMCAR	8	63	535.7123799927534	1069.4102070523068	2	535.71337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_EREC(Carbamidomethyl (C))M(Oxidation (M))CAR_	ENST00000376048.9_1_1:14149675-14149816:+|nuORF	24.20275056022122	0.7724576178584145	4				NaN	NaN	0	NaN	1057	2255	3312
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3315	13.532	NaN	3973	30	0	1299	0.106			+	44530	TSVRAEVQQ	9	59	509.2693454577945	1016.524137982389	2	509.270263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TSVRAEVQQ_	REV__ABI3|p.R84Q|1|0.15|ENSG00000108798|chr17:49216664-49216664|G/A|missense_variant	37.81151784470057	0.4459294069877048	4				NaN	NaN	0	NaN	1058	2255	3312
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3316	13.534	NaN	909.08	30	0	120.73	0.106				-1	 	0	32	325.1787983365012	648.3430437398024	2	325.1793518066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1059	2255	3312
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3317	13.536	NaN	10387	30	0	1195.3	0.106	+			22916	KVPDQKGTPK	10	73	549.3189748458097	1096.6233967584194	2	549.3199462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KVPDQKGTPK_	ENSG00000177570|ENST00000314727|SAMD12	63.53385203322761	0.33370026130094593	4				NaN	NaN	0	NaN	1060	2255	3312
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3318	13.538	NaN	1134.3	30	0	179.45	0.035			+	-1	SVPVCCAPR	9	46	494.7382507324219	NaN	0	494.7382507324219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_SVPVCC(Carbamidomethyl (C))APR_	REV__ENSG00000221837|ENST00000397911|KRTAP10-9	38.80614096846853	0.28164298475537564	4				NaN	NaN	0	NaN	1061	2255	3312
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3319	13.538	NaN	3058.1	30	0	585.76	0.143			+	44992	TVDKLQEIGDM	11	65	632.8098267906342	1263.6051006480684	2	632.8106689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_TVDKLQEIGDM(Oxidation (M))_	REV__ENSG00000145375|ENST00000274008|SPATA5;REV__ENST00000422835.2_1_4:123844270-124023368:+|nuORF;REV__nc|ENSG00000145375|Q8NB90-2|AFG2A	41.42661286455405	0.5384226294179143	4				NaN	NaN	0	NaN	1062	2255	3312
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3332	13.568	NaN	11097	30	0	3194.4	0.214	+			14011	GSFGKDQAHK	10	70	537.7705370631821	NaN	0	537.7703857421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSFGKDQAHK_	ENSG00000134987|ENST00000513710|WDR36;ENST00000505303.5_1_5:110428043-110447004:+|nuORF;nc|ENSG00000134987|Q8NI36|WDR36	99.01295224348159	0.019778302521515547	4				NaN	NaN	0	NaN	1072	2258	3331
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3333	13.571	NaN	5973.6	30	0	1108.1	0.106	+			48919	VVDNGSGMCK	10	67	541.7327098202059	1081.4508667072116	2	541.7342529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_VVDNGSGM(Oxidation (M))C(Carbamidomethyl (C))K_	ACTBL2|p.R29Gfs*7|1|0.37|ENSG00000169067|chr5:57482623-57482623|G/-|frameshift_variant;ENSG00000075624|ENST00000646664|ACTB;ENSG00000169067|ENST00000423391|ACTBL2;ENST00000418351.1_1_15:44282253-44282364:-|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000477812.1_1_7:5569027-5569288:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF	145.46060221211434	0.009301538339246195	4				NaN	NaN	0	NaN	1073	2258	3331
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3334	13.573	NaN	27572	30	0	4558.8	0.106	+			44907	TVAEKAVKK	9	89	487.305029057271	972.595505181342	2	487.305419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVAEKAVKK_	ENSG00000101596|ENST00000320876|SMCHD1;ENST00000577300.1_1_18:2703698-2706469:+|nuORF;nc|ENSG00000101596|A6NHR9-2|SMCHD1;SMCHD1|p.D1006Kfs*40|1|0.32|ENSG00000101596|chr18:2729370-2729371|-/AA|frameshift_variant;SMCHD1|p.D1006Tfs*39|2|0.32|ENSG00000101596|chr18:2729371-2729371|A/-|frameshift_variant;SMCHD1|p.G727Rfs*21|1|0.3|ENSG00000101596|chr18:2707832-2707833|-/A|frameshift_variant;SMCHD1|p.M779Wfs*12|1|0.38|ENSG00000101596|chr18:2718226-2718226|A/-|frameshift_variant	104.01359247289065	0.03510646158778409	4				NaN	NaN	0	NaN	1074	2258	3331
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3335	13.575	NaN	2207.7	30	0	991.35	0.106	+			22465	KTLSPRTLQ	9	42	348.5450744628906	NaN	0	348.5450744628906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTLSPRTLQ_	ENSG00000148120|ENST00000375315|AOPEP;ENST00000460573.5_1_9:97767442-97823116:+|nuORF;ENST00000463372.5_1_9:97767418-97844994:+|nuORF;ENST00000468164.1_1_9:97818730-97844994:+|nuORF;nc|ENSG00000148120|Q8N6M6-2|AOPEP;nc|ENSG00000148120|Q8N6M6-4|AOPEP	35.15202426646627	0.3000918603816441	4				NaN	NaN	0	NaN	1075	2258	3331
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3336	13.577	NaN	7000.5	30	0	1768.4	0.106	+			2867	ASAPPQEQK	9	59	478.2458345285835	954.477116123967	2	478.245361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASAPPQEQK_	ENSG00000070756|ENST00000318607|PABPC1;nc|ENSG00000070756|P11940-2|PABPC1	72.87924865735499	0.12833875048249987	4				NaN	NaN	0	NaN	1076	2258	3331
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3337	13.579	NaN	3099.6	30	0	605.55	0.036	+			31737	QPAMQALALGP	11	57	548.796875	NaN	0	548.796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QPAMQALALGP_	nc|ENSG00000189348|A6NNH2|FAM90A27P	42.396135135203025	0.3699325281549567	4				NaN	NaN	0	NaN	1077	2258	3331
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3338	13.579	NaN	9287.9	30	0	1170.1	0.14	+			36106	SEKKNSGAL	9	64	467.2530715275167	932.4915901218334	2	467.2533874511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SEKKNSGAL_	ENSG00000103415|ENST00000570646|HMOX2;HMOX2|p.Q165Pfs*26|1|0.31|ENSG00000103415|chr16:4507993-4507994|-/G|frameshift_variant	118.74307786436346	0.02196067127630568	4				NaN	NaN	0	NaN	1078	2258	3331
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3356	13.618	NaN	10271	30	0	942.38	0.214	+			48942	VVEKPQPKK	9	74	526.8259110531579	1051.6372691731158	2	526.8270874023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVEKPQPKK_	ENSG00000197622|ENST00000357235|CDC42SE1	104.74654710444128	0.034358562718640136	4				NaN	NaN	0	NaN	1093	2261	3355
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3357	13.622	NaN	5960	30	0	1351.1	0.106	+			13848	GQTPKVAKQEK	11	57	405.2346496582031	NaN	0	405.2346496582031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GQTPKVAKQEK_	ENSG00000149806|ENST00000529639|FAU	40.05817265558897	0.3867246477658885	4				NaN	NaN	0	NaN	1094	2261	3355
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3358	13.624	NaN	1551.6	30	0	290.12	0.106				-1	 	0	50	490.31086038340925	978.6071678336185	2	490.3111572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1095	2261	3355
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3359	13.626	NaN	2630.1	30	0	724.33	0.106	+			13847	GQTPKVAKQEK	11	68	607.3478828085894	1212.6812126839786	2	607.3486938476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GQTPKVAKQEK_	ENSG00000149806|ENST00000529639|FAU	106.88024417677582	0.046463184254991054	4				NaN	NaN	0	NaN	1096	2261	3355
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3360	13.628	NaN	4100.6	30	0	611.15	0.106	+			34255	RTGSVSVHK	9	59	324.18566504612244	NaN	0	324.1856689453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RTGSVSVHK_	ENSG00000167393|ENST00000390665|PPP2R3B;ENST00000445792.7_1_X:305849-322301:-|nuORF	41.080066990542036	0.2681650218997241	4				NaN	NaN	0	NaN	1097	2261	3355
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3361	13.629	NaN	1259.6	30	0	333.93	0.037				-1	RKAPGATLCC	10	30	378.52520739840367	NaN	0	378.191650390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Carbamidomethyl (C)	_RKAPGATLC(Carbamidomethyl (C))C(Carbamidomethyl (C))_	KCNQ1|p.R401Gfs*18|2|0.35|ENSG00000053918|chr11:2587637-2587637|C/-|frameshift_variant	21.68575002086885	0.4201028297492154	4				NaN	NaN	0	NaN	1098	2261	3355
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3362	13.63	NaN	2108.4	30	0	283.52	0.14	+			43513	TGSPSSPQQK	10	55	508.7518000903283	1015.4890472474566	2	508.2742614746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TGSPSSPQQK_	ENSG00000133401|ENST00000438447|PDZD2;ENST00000502489.5_1_5:31983264-32077762:+|nuORF;nc|ENSG00000133401|O15018-2|PDZD2;PDZD2|p.D2774Rfs*7|1|0.29|ENSG00000133401|chr5:32101201-32101202|-/G|frameshift_variant;PDZD2|p.E2629Kfs*37|1|0.23|ENSG00000133401|chr5:32097314-32097314|A/-|frameshift_variant;PDZD2|p.K1843Rfs*31|3|0.26|ENSG00000133401|chr5:32088970-32088970|A/-|frameshift_variant;PDZD2|p.S2770Gfs*12|1|0.04|ENSG00000133401|chr5:32101193-32101194|-/GGGT|frameshift_variant;PDZD2|p.V1845Rfs*6|2|0.38|ENSG00000133401|chr5:32088969-32088970|-/A|frameshift_variant	49.536043120802724	0.461275219792494	4				NaN	NaN	0	NaN	1099	2261	3355
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3377	13.663	NaN	3198.9	30	0	786.32	0.214	+			2882	ASASKGLEK	9	58	445.75036767618855	NaN	0	445.7503662109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASASKGLEK_	ENSG00000101294|ENST00000398174|HM13;ENST00000335574.9_2_20:30154038-30157019:+|nuORF;ENST00000460389.5_1_20:30136650-30157019:+|nuORF;ENST00000487281.1_1_20:30155508-30157019:+|nuORF;ENST00000492709.5_1_20:30132820-30157019:+|nuORF;nc|ENSG00000101294|Q8TCT9-5|HM13;nc|ENSG00000101294|Q8TCT9|HM13	56.43379154798735	0.16452882468284893	4				NaN	NaN	0	NaN	1111	2264	3376
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3378	13.667	NaN	13525	30	0	4025.1	0.106	+			22263	KTATAVAHCK	10	74	515.278262669149	1028.5419724050978	2	515.279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTATAVAHCK_	chr19:39435705-39435848|468|276.17|0.0|24.72|-|0|RPS16,RPS16|1;ENSG00000105193|ENST00000251453|RPS16;ENST00000601390.1_1_19:39926180-39926535:-|nuORF	131.4175700721456	0.013042345116780782	4				NaN	NaN	0	NaN	1112	2264	3376
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3379	13.669	NaN	3559.7	30	0	897.68	0.106	+			38219	SQGSTNYGK	9	56	471.2196979782026	NaN	0	471.2193298339844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SQGSTNYGK_	ENSG00000197451|ENST00000358344|HNRNPAB;nc|ENSG00000197451|Q99729|HNRNPAB	56.43379154798735	0.16452882468284893	4				NaN	NaN	0	NaN	1113	2264	3376
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3380	13.671	NaN	7773.1	30	0	840.59	0.106	+			16453	HESSSHHDL	9	59	524.7251886287333	1047.4358243242666	2	524.7261352539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HESSSHHDL_	ENSG00000050344|ENST00000056233|NFE2L3;ENST00000606261.1_1_7:26224125-26225400:+|nuORF;NFE2L3|p.G654Rfs*2|1|0.18|ENSG00000050344|chr7:26185655-26185656|-/A|frameshift_variant	68.78682469695295	0.14603441672067394	4				NaN	NaN	0	NaN	1114	2264	3376
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3381	13.673	NaN	2434.1	30	0	407.69	0.106			+	33242	RGAKAGVSP	9	45	421.7451158478914	841.4756787625828	2	421.7453308105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RGAKAGVSP_	REV__ENSG00000066735|ENST00000423312|KIF26A	51.33545320467046	0.2872990594074956	4				NaN	NaN	0	NaN	1115	2264	3376
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3382	13.674	NaN	13679	30	0	4215.2	0.036	+			22264	KTATAVAHCK	10	77	343.8544807046741	1028.5416127142223	3	343.85504150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KTATAVAHCK_	chr19:39435705-39435848|468|276.17|0.0|24.72|-|0|RPS16,RPS16|1;ENSG00000105193|ENST00000251453|RPS16;ENST00000601390.1_1_19:39926180-39926535:-|nuORF	70.41160668669231	0.27395730963879994	4				NaN	NaN	0	NaN	1116	2264	3376
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3383	13.675	NaN	3131.4	30	0	895.43	0.142				-1	 	0	52	575.2638843940618	574.2566079274618	1	575.2644653320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1117	2264	3376
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3401	13.715	NaN	12869	30	0	2209	0.214	+			5382	ATYETKESK	9	76	528.7643321995578	NaN	0	528.7643432617188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATYETKESK_	ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65623404-65625570:-|nuORF;nc|ENSG00000165410|Q9Y281-3|CFL2	155.5846463517096	0.006928971805488876	4				NaN	NaN	0	NaN	1132	2267	3400
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3402	13.718	NaN	27706	30	0	8544.5	0.106	+			5381	ATYETKESK	9	65	352.8445575397924	1055.5118432195773	3	352.8450622558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATYETKESK_	ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65623404-65625570:-|nuORF;nc|ENSG00000165410|Q9Y281-3|CFL2	47.657333605630114	0.33044192980041115	4				NaN	NaN	0	NaN	1133	2267	3400
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3403	13.72	NaN	21588	30	0	11419	0.106	+			29250	NWYPFQKKLG	10	63	427.564803803847	1279.672582011741	3	427.5652160644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NWYPFQKKLG_	ENST00000317135.12_1_X:114418990-114419065:-|nuORF	22.579656572578934	0.6954366826851017	4				NaN	NaN	0	NaN	1134	2267	3400
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3404	13.722	NaN	8651	30	0	2475	0.106	+			3508	ASSKDAIKK	9	61	474.2790312021183	946.5435094710366	2	474.279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASSKDAIKK_	DSTN|p.Y117H|1|0.26|ENSG00000125868|chr20:17604592-17604592|T/C|missense_variant;ENSG00000125868|ENST00000246069|DSTN;ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000400899.2_1_1:11051144-11051557:-|nuORF;ENST00000530945.1_1_11:65623104-65623215:-|nuORF;nc|ENSG00000125868|P60981-2|DSTN;nc|ENSG00000165410|Q9Y281-3|CFL2	81.52500206392136	0.09095445986635249	4				NaN	NaN	0	NaN	1135	2267	3400
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3405	13.724	NaN	9865.7	30	0	1835	0.106	+			36743	SGYEVHHQK	9	78	542.7614003999809	1083.5082478667616	2	542.762451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SGYEVHHQK_	ENSG00000142192|ENST00000346798|APP;nc|ENSG00000142192|P05067-10|APP;nc|ENSG00000142192|P05067-11|APP;nc|ENSG00000142192|P05067-3|APP;nc|ENSG00000142192|P05067-4|APP;nc|ENSG00000142192|P05067-5|APP;nc|ENSG00000142192|P05067-6|APP;nc|ENSG00000142192|P05067-7|APP;nc|ENSG00000142192|P05067-8|APP;nc|ENSG00000142192|P05067-9|APP	52.936696900407355	0.27249468807391813	4				NaN	NaN	0	NaN	1136	2267	3400
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3406	13.726	NaN	1373.6	30	0	363.33	0.031	+			46622	VGAALRPA	8	36	377.73170473279663	753.4488565323933	2	377.7319641113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VGAALRPA_	ENSG00000008869|ENST00000233099|HEATR5B;ENSG00000129493|ENST00000543095|HEATR5A;nc|ENSG00000008869|Q9P2D3-3|HEATR5B;nc|ENSG00000129493|Q86XA9-2|HEATR5A;nc|ENSG00000129493|Q86XA9|HEATR5A	21.70233525837049	0.7917639344264583	4				NaN	NaN	0	NaN	1137	2267	3400
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3407	13.726	NaN	2167.8	30	0	496.25	0.141			+	8812	EELDKIKCL	9	43	545.7921514103537	1089.5697498875072	2	545.7930908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EELDKIKCL_	REV__ENST00000573177.1_1_18:3603669-3604008:+|nuORF	19.1035232394073	0.6112419832031293	4				NaN	NaN	0	NaN	1138	2267	3400
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3422	13.758	NaN	77345	30	0	36175	0.214				-1	 	0	63	412.69789860325295	823.3812442733059	2	412.6982727050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1150	2270	3421
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3423	13.762	NaN	4158.6	30	0	717.58	0.106	+			6133	AVQDKGSIHK	10	76	541.8005931846899	1081.5866334361797	2	541.8018188476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVQDKGSIHK_	ENSG00000178035|ENST00000326739|IMPDH2;ENST00000466147.5_1_3:49062090-49062580:-|nuORF;ENST00000484872.1_1_3:49061926-49062670:-|nuORF	93.5975768576971	0.11047702954938905	4				NaN	NaN	0	NaN	1151	2270	3421
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3424	13.764	NaN	3849	30	0	1175.3	0.106	+			31262	QHRGRGKT	8	56	470.2645145028024	938.5144760724048	2	470.2648010253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QHRGRGKT_	ENST00000579695.5_1_17:38077365-38077797:-|nuORF	45.9519527083369	0.6193794311207887	4				NaN	NaN	0	NaN	1152	2270	3421
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3425	13.765	NaN	1774.9	30	0	243.53	0.106			+	40390	STVAGAKK	8	50	381.22931038361503	NaN	0	381.22930908203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STVAGAKK_	REV__ENSG00000111110|ENST00000228705|PPM1H;REV__PPM1H|p.T227Hfs*30|2|0.16|ENSG00000111110|chr12:62801894-62801894|G/-|frameshift_variant	58.78195531508484	1.7418937515398478	4				NaN	NaN	0	NaN	1153	2270	3421
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3426	13.767	NaN	10985	30	0	3229.5	0.106				-1	GTCAEKLKK	9	64	517.7869400206388	NaN	0	517.786865234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_GTC(Carbamidomethyl (C))AEKLKK_	ENSG00000076984|ENST00000397979|MAP2K7;ENST00000468058.1_1_19:7975099-7977313:+|nuORF;MAP2K7|p.P292Qfs*119|2|0.25|ENSG00000076984|chr19:7911264-7911264|C/-|frameshift_variant;nc|ENSG00000076984|O14733-2|MAP2K7;nc|ENSG00000076984|O14733-3|MAP2K7;nc|ENSG00000076984|O14733-4|MAP2K7	109.47833844074708	0.010168233843482827	4				NaN	NaN	0	NaN	1154	2270	3421
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3427	13.769	NaN	3858.1	30	0	877.78	0.037				-1	 	0	46	361.535900345961	1081.585871638083	3	361.5364074707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1155	2270	3421
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3428	13.77	NaN	15184	30	0	3475.8	0.14	+			3757	ATAEKCLHK	9	76	529.2756943954948	1056.5368358577896	2	529.2763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_ATAEKC(Carbamidomethyl (C))LHK_	ENSG00000180098|ENST00000373830|TRNAU1AP;ENST00000464880.5_1_1:28879622-28887433:+|nuORF;ENST00000480930.5_1_1:28879622-28887666:+|nuORF;ENST00000484775.1_1_1:28887181-28904036:+|nuORF;ENST00000491577.5_1_1:28879622-28887259:+|nuORF;ENST00000495995.5_1_1:28880088-28887666:+|nuORF;TRNAU1AP|p.Q222Sfs*29|1|0.24|ENSG00000180098|chr1:28571305-28571305|C/-|frameshift_variant	72.87924865735499	0.12833875048249987	4				NaN	NaN	0	NaN	1156	2270	3421
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3443	13.803	NaN	91368	30	0	28923	0.179				-1	 	0	92	438.7605707899716	875.5065886467432	2	438.7608642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1168	2273	3442
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3444	13.806	NaN	4362.9	30	0	909.01	0.106				-1	VVMRDPNTK	9	52	538.2810515830909	1074.5475502329816	2	538.2823486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_VVM(Oxidation (M))RDPNTK_	chr12:54282662-54282800|482|460.96|0.0|25.46|+|ENST00000677249|HNRNPA1,HNRNPA1;ENSG00000135486|ENST00000340913|HNRNPA1;ENSG00000139675|ENST00000357495|HNRNPA1L2;ENSG00000224578|ENST00000565308|HNRNPA1L3;ENST00000441603.1_1_11:5593122-5593311:-|nuORF;ENST00000452488.1_1_2:41383770-41384067:+|nuORF;ENST00000457695.2_1_X:100110922-100111255:-|nuORF;ENST00000575692.1_1_17:2210089-2210875:+|nuORF;nc|ENSG00000135486|P09651-2|HNRNPA1;nc|ENSG00000135486|P09651-3|HNRNPA1	36.446750945000026	0.4619375763483977	4				NaN	NaN	0	NaN	1169	2273	3442
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3445	13.808	NaN	10928	30	0	2266.4	0.106	+			17510	IDINSKKI	8	62	465.78394406693394	929.5533352006679	2	465.78411865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IDINSKKI_	tr|U7T4B6|U7T4B6_FUSNUTranscriptionalregulatorOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00410PE=4SV=1	93.19546047674547	0.2677966331495483	4				NaN	NaN	0	NaN	1170	2273	3442
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3446	13.81	NaN	23566	30	0	10558	0.106	+			3909	ATARPRPVK	9	74	498.3084065907965	994.602260248393	2	498.30889892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATARPRPVK_	ENSG00000170892|ENST00000396388|TSEN34	56.43379154798735	0.2433427591689151	4				NaN	NaN	0	NaN	1171	2273	3442
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3447	13.812	NaN	5527.5	30	0	1596.5	0.106	+			20484	KEYLFYLN	8	70	545.2836474604704	1088.5527419877408	2	545.2847290039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEYLFYLN_	ENSG00000197081|ENST00000356956|IGF2R;IGF2R|p.D1317Tfs*27|3|0.42|ENSG00000197081|chr6:160064456-160064456|G/-|frameshift_variant;IGF2R|p.D2163Tfs*2|1|0.16|ENSG00000197081|chr6:160089932-160089932|G/-|frameshift_variant;IGF2R|p.G2426Efs*10|1|0.25|ENSG00000197081|chr6:160104882-160104882|G/-|frameshift_variant	58.78195531508484	0.5138399468736706	4				NaN	NaN	0	NaN	1172	2273	3442
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3448	13.813	NaN	4027.7	30	0	541.64	0.106	+			20428	KETTLRELK	9	66	559.3316781315492	1116.6488033298983	2	559.3329467773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KETTLRELK_	ENSG00000008086|ENST00000623535|CDKL5;nc|ENSG00000008086|O76039-1|CDKL5	65.46538089061403	0.16805504838372562	4				NaN	NaN	0	NaN	1173	2273	3442
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3449	13.815	NaN	6204.1	30	0	684.69	0.039	+			34358	RTQHIQQPRK	10	76	431.2487143131483	1290.724313539645	3	431.2493591308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RTQHIQQPRK_	ENSG00000112977|ENST00000230895|DAP	55.08391021199286	0.41055145962533396	4				NaN	NaN	0	NaN	1174	2273	3442
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3466	13.85	NaN	39824	30	0	10679	0.214	+			5048	ATSGSTGSVEK	11	92	512.2508805446968	1022.4872081561936	2	512.2516479492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSGSTGSVEK_	ENSG00000147548|ENST00000317025|NSD3;nc|ENSG00000147548|Q9BZ95-2|NSD3;nc|ENSG00000147548|Q9BZ95-3|NSD3;nc|ENSG00000147548|Q9BZ95-4|NSD3;nc|ENSG00000147548|Q9BZ95-5|NSD3	154.0112374973812	6.383267724898207E-05	4				NaN	NaN	0	NaN	1188	2276	3465
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3467	13.854	NaN	8507.5	30	0	1656.9	0.106	+			41648	SVQTKTIKK	9	65	344.8852233886719	NaN	0	344.8852233886719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVQTKTIKK_	ENSG00000069869|ENST00000435532|NEDD4;ENST00000513957.1_1_15:56216842-56258681:-|nuORF	58.22992032128504	0.15686832049467786	4				NaN	NaN	0	NaN	1189	2276	3465
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3468	13.856	NaN	13117	30	0	3035.5	0.106				-1	 	0	71	421.75786655815546	841.5011801831109	2	421.75836181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1190	2276	3465
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3469	13.858	NaN	8054.5	30	0	4828.7	0.106				-1	RAGSRFLRM	9	62	555.3059320935367	1108.5973112538734	2	555.3068237304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_RAGSRFLRM(Oxidation (M))_	ENST00000527372.6_2_17:27400982-27401243:-|nuORF	27.882242232435846	0.5426732730940306	4				NaN	NaN	0	NaN	1191	2276	3465
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3470	13.86	NaN	2839.7	30	0	518.96	0.106			+	-1	KVSCGRRLM	9	63	533.2888504041031	NaN	0	533.2889404296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_KVSCGRRLM(Oxidation (M))_	REV__nc|ENSG00000151532|Q96AJ9-1|VTI1A	68.78682469695295	0.1118430353446351	4				NaN	NaN	0	NaN	1192	2276	3465
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3471	13.862	NaN	2924	30	0	874.22	0.038	+			13514	GLPSGSCRDKK	11	46	402.2082824707031	NaN	0	402.2082824707031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_GLPSGSC(Carbamidomethyl (C))RDKK_	ENSG00000174099|ENST00000308259|MSRB3	45.908116695636124	0.34470816508309304	4				NaN	NaN	0	NaN	1193	2276	3465
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3472	13.862	NaN	4809.5	30	0	1223.6	0.141	+			34140	RSVHLGHSK	9	61	340.8616323368479	NaN	0	340.8617248535156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RSVHLGHSK_	ENST00000409711.1_1_2:101619263-101620675:+|nuORF	77.53327743719008	0.07983619970221587	4				NaN	NaN	0	NaN	1194	2276	3465
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3489	13.899	NaN	17058	30	0	2228.2	0.214	+			33033	REKANGTTV	9	79	488.2639076426552	974.5132623521105	2	488.2641906738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_REKANGTTV_	ENSG00000037241|ENST00000265100|RPL26L1;ENSG00000161970|ENST00000648839|RPL26;ENST00000584906.5_1_17:8280884-8283916:-|nuORF;ENST00000602923.1_1_11:2356544-2356979:-|nuORF	120.8684288430529	0.02067403653475984	4				NaN	NaN	0	NaN	1208	2279	3488
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3490	13.903	NaN	9724.7	30	0	2022	0.106			+	27899	MTSGMGMGTQ	10	69	500.69742916705195	999.3803054009039	2	500.69818115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MTSGMGMGTQ_	REV__ENSG00000197901|ENST00000360421|SLC22A6;REV__nc|ENSG00000197901|Q4U2R8|SLC22A6	60.11826168202944	0.36476464221954025	4				NaN	NaN	0	NaN	1209	2279	3488
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3491	13.905	NaN	3487.2	30	0	383.64	0.106				-1	 	0	65	479.3075494152115	956.600545897223	2	479.307861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1210	2279	3488
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3492	13.907	NaN	2280.8	30	0	369.19	0.106	+			19447	KARCFPKS	8	55	468.7587871697951	NaN	0	468.7587585449219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KARCFPKS_	ENST00000296509.10_1_4:120980928-120980979:-|nuORF	30.503639358989545	1.7418937515398478	4				NaN	NaN	0	NaN	1211	2279	3488
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3493	13.908	NaN	6636.9	30	0	2659	0.106				-1	 	0	54	427.6905354614625	853.366517989725	2	427.69091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1212	2279	3488
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3494	13.91	NaN	37935	30	0	7473.1	0.035				-1	 	0	82	329.528958454775	985.5650459645251	3	329.5295104980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1213	2279	3488
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3495	13.911	NaN	2157.9	30	0	363.77	0.142	+			6379	AVVEETRALR	10	38	381.8866233381883	NaN	0	381.55230712890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AVVEETRALR_	ENSG00000166263|ENST00000376352|STXBP4;STXBP4|p.K404Rfs*31|1|0.1|ENSG00000166263|chr17:55078095-55078095|A/-|frameshift_variant	28.081489160057373	0.40797012399963245	4				NaN	NaN	0	NaN	1214	2279	3488
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3513	13.95	NaN	5768.6	30	0	800.18	0.214	+			39266	STAQKAIGK	9	70	452.2662587649464	NaN	0	452.2662658691406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STAQKAIGK_	DPYSL3|p.A516Qfs*15|1|0.31|ENSG00000113657|chr5:147395638-147395638|G/-|frameshift_variant;ENSG00000113657|ENST00000343218|DPYSL3;nc|ENSG00000113657|Q14195|DPYSL3	98.58198989935565	0.02429614701295995	4				NaN	NaN	0	NaN	1229	2282	3512
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3514	13.954	NaN	5338.4	30	0	1015.5	0.106	+			9484	EKRQEQIAK	9	61	565.3192354506724	1128.6239179681447	2	565.3201293945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EKRQEQIAK_	ENSG00000137154|ENST00000380394|RPS6;ENST00000393214.2_1_X:73595962-73596157:-|nuORF;ENST00000498815.1_1_9:19376293-19376674:-|nuORF	69.6276240434122	0.14239879520340665	4				NaN	NaN	0	NaN	1230	2282	3512
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3515	13.956	NaN	2505.9	30	0	453.97	0.106	+			48808	VVADKSCEK	9	60	489.74902673610194	977.4835005390039	2	489.7496032714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVADKSCEK_	ENSG00000205220|ENST00000358514|PSMB10;ENST00000575556.1_1_16:67970119-67970555:-|nuORF	39.252832667884924	0.4290233611298554	4				NaN	NaN	0	NaN	1231	2282	3512
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3516	13.957	NaN	16170	30	0	5460.6	0.106				-1	 	0	59	447.7294080698499	893.4442632064998	2	447.7297058105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1232	2282	3512
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3517	13.959	NaN	14954	30	0	3228.5	0.106				-1	 	0	62	328.8775901413767	983.61094102433	3	328.87811279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1233	2282	3512
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3518	13.961	NaN	2242.5	30	0	357.39	0.037			+	-1	FRPICPRLA	9	28	377.21532832981404	1128.6241555896422	3	377.215576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_FRPIC(Carbamidomethyl (C))PRLA_	REV__ENSG00000100033|ENST00000357068|PRODH;REV__ENST00000491604.5_1_22:18909836-18923800:-|nuORF	27.882242232435846	0.5426732730940306	4				NaN	NaN	0	NaN	1234	2282	3512
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3519	13.962	NaN	1148	30	0	262.16	0.139			+	19590	KDEFESVS	8	49	470.7185363769531	NaN	0	470.7185363769531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KDEFESVS_	REV__ENSG00000131018|ENST00000367255|SYNE1;REV__ENST00000461872.6_1_6:152697909-152949466:-|nuORF;REV__nc|ENSG00000131018|Q8NF91-10|SYNE1;REV__nc|ENSG00000131018|Q8NF91-4|SYNE1;REV__nc|ENSG00000131018|Q8NF91-6|SYNE1;REV__nc|ENSG00000131018|Q8NF91-7|SYNE1;REV__SYNE1|p.A3854Lfs*20|1|0.4|ENSG00000131018|chr6:152352048-152352048|T/-|frameshift_variant;REV__SYNE1|p.E4738Kfs*25|1|0.12|ENSG00000131018|chr6:152330474-152330474|T/-|frameshift_variant;REV__SYNE1|p.E5862Gfs*83|1|0.12|ENSG00000131018|chr6:152300729-152300738|CCAGACTCCT/-|frameshift_variant;REV__SYNE1|p.G6773Wfs*7|1|0.44|ENSG00000131018|chr6:152236186-152236187|-/A|frameshift_variant;REV__SYNE1|p.I2756*|1|0.12|ENSG00000131018|chr6:152387293-152387293|T/-|frameshift_variant;REV__SYNE1|p.K3606Sfs*5|1|0.25|ENSG00000131018|chr6:152354768-152354768|T/-|frameshift_variant;REV__SYNE1|p.K6871Rfs*22|2|0.52|ENSG00000131018|chr6:152233881-152233881|T/-|frameshift_variant;REV__SYNE1|p.L8283Pfs*8|1|0.19|ENSG00000131018|chr6:152148173-152148174|-/G|frameshift_variant;REV__SYNE1|p.M2832Nfs*53|1|0.25|ENSG00000131018|chr6:152385831-152385832|-/T|frameshift_variant;REV__SYNE1|p.M5602Nfs*13|2|0.32|ENSG00000131018|chr6:152310779-152310780|-/T|frameshift_variant;REV__SYNE1|p.N2333Kfs*2|1|0.32|ENSG00000131018|chr6:152401168-152401169|-/T|frameshift_variant;REV__SYNE1|p.S2126Pfs*10|1|0.33|ENSG00000131018|chr6:152409564-152409564|A/-|frameshift_variant;REV__SYNE1|p.V8635Sfs*12|1|0.15|ENSG00000131018|chr6:152133375-152133375|T/-|frameshift_variant	29.14955571784316	1.7418937515398478	4				NaN	NaN	0	NaN	1235	2282	3512
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3537	14.001	NaN	9467.4	30	0	1105.3	0.208				-1	 	0	73	339.87261401953276	1016.5960126587984	3	339.8731384277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1250	2285	3536
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3538	14.005	NaN	83841	30	0	24542	0.106				-1	 	0	103	420.2214934499586	838.4284339667172	2	420.2218933105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1251	2285	3536
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3539	14.007	NaN	13639	30	0	3502.4	0.106	+			2295	AMAPPSHRK	9	78	497.76543373804276	993.5163145428855	2	497.765869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AMAPPSHRK_	ENSG00000141456|ENST00000572293|PELP1;ENST00000573523.5_1_17:4574736-4578861:-|nuORF	42.86426827375447	0.38666266728046506	4				NaN	NaN	0	NaN	1252	2285	3536
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3540	14.008	NaN	6197.2	30	0	1956.8	0.106	+			4909	ATQKPLVSKK	10	72	550.3455440283801	NaN	0	550.3455810546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATQKPLVSKK_	ENSG00000159166|ENST00000391967|LAD1;LAD1|p.G152Afs*67|1|0.17|ENSG00000159166|chr1:201386906-201386906|C/-|frameshift_variant	66.96192283764107	0.17742606645642828	4				NaN	NaN	0	NaN	1253	2285	3536
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3541	14.01	NaN	2084.6	30	0	200.92	0.106			+	-1	QKRHMSPSE	9	72	558.2667846679688	NaN	0	558.2667846679688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_QKRHM(Oxidation (M))SPSE_	REV__ENSG00000186472|ENST00000333891|PCLO;REV__nc|ENSG00000186472|Q9Y6V0-6|PCLO;REV__PCLO|p.E1944Sfs*8|1|0.34|ENSG00000186472|chr7:82955124-82955124|T/-|frameshift_variant;REV__PCLO|p.I247Lfs*42|1|0.14|ENSG00000186472|chr7:83155902-83155902|T/-|frameshift_variant;REV__PCLO|p.K2442Sfs*2|4|0.29|ENSG00000186472|chr7:82953628-82953628|T/-|frameshift_variant;REV__PCLO|p.K3621Ifs*26|1|0.04|ENSG00000186472|chr7:82949726-82949727|-/CCAGATA|frameshift_variant;REV__PCLO|p.K4306Gfs*8|1|0.04|ENSG00000186472|chr7:82915067-82915070|TTTT/-|frameshift_variant;REV__PCLO|p.M3036Tfs*24|1|0.06|ENSG00000186472|chr7:82951481-82951482|-/G|frameshift_variant;REV__PCLO|p.N4248Kfs*31|1|0.28|ENSG00000186472|chr7:82915242-82915243|-/T|frameshift_variant;REV__PCLO|p.P1234Afs*11|1|0.31|ENSG00000186472|chr7:82966089-82966090|-/T|frameshift_variant;REV__PCLO|p.P2408Lfs*36|1|0.44|ENSG00000186472|chr7:82953730-82953730|G/-|frameshift_variant;REV__PCLO|p.Q3062Tfs*25|1|0.2|ENSG00000186472|chr7:82951405-82951406|-/G|frameshift_variant;REV__PCLO|p.S1913Vfs*9|1|0.32|ENSG00000186472|chr7:82955216-82955216|T/-|frameshift_variant;REV__PCLO|p.T3933Nfs*47|1|0.06|ENSG00000186472|chr7:82916188-82916189|-/T|frameshift_variant;REV__PCLO|p.T5069Qfs*20|1|0.11|ENSG00000186472|chr7:82760722-82760722|T/-|frameshift_variant;REV__PCLO|p.V1883Ffs*29|1|0.09|ENSG00000186472|chr7:82955307-82955307|T/-|frameshift_variant;REV__PCLO|p.Y3007Lfs*2|1|0.28|ENSG00000186472|chr7:82951935-82951936|-/A|frameshift_variant	42.86426827375447	0.2558691296974908	4				NaN	NaN	0	NaN	1254	2285	3536
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3542	14.012	NaN	16475	30	0	1987.4	0.106				-1	 	0	77	461.76320904415365	921.5118651551073	2	461.7635192871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1255	2285	3536
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3543	14.014	NaN	5323.1	30	0	1685.7	0.032				-1	 	0	59	413.77846995335517	825.5423869735104	2	413.7789306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1256	2285	3536
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3561	14.051	NaN	4904.6	30	0	795.75	0.214	+			16462	HETEQKRL	8	65	520.7770835089998	1039.5396140847995	2	520.77783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HETEQKRL_	ENSG00000139644|ENST00000267115|TMBIM6;ENST00000553022.1_1_12:50146843-50152319:+|nuORF;nc|ENSG00000139644|P55061-2|TMBIM6	120.62098272573253	0.23366758524054274	4				NaN	NaN	0	NaN	1271	2288	3560
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3562	14.055	NaN	74854	30	0	10654	0.106				-1	 	0	109	517.795019206877	1033.5754854805539	2	517.795654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1272	2288	3560
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3563	14.057	NaN	11070	30	0	2506.7	0.106	+			13106	GGERNSVS	8	65	403.19304425607095	804.3715355789419	2	403.1933898925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GGERNSVS_	ENST00000258991.7_1_17:62225787-62225874:-|nuORF	44.116797842482775	0.6307669463330267	4				NaN	NaN	0	NaN	1273	2288	3560
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3564	14.059	NaN	22264	30	0	4710.4	0.106				-1	 	0	73	341.1869530469344	680.3593531606688	2	341.18743896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1274	2288	3560
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3565	14.061	NaN	15867	30	0	3496.8	0.106	+			49153	VVMGKQQSK	9	83	502.78095092572437	1003.5473489182488	2	502.7814636230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVMGKQQSK_	ENSG00000148225|ENST00000374193|WDR31;nc|ENSG00000148225|Q8NA23-2|WDR31	163.1509380574825	0.003936019289634439	4				NaN	NaN	0	NaN	1275	2288	3560
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3566	14.062	NaN	10624	30	0	2800.7	0.033	+			39555	STGGHPVVK	9	74	441.2450846151815	880.475616297163	2	441.24530029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STGGHPVVK_	ENSG00000072736|ENST00000346183|NFATC3;ENST00000379165.8_1_16:68119584-68225707:+|nuORF;ENST00000553077.5_1_16:68118971-68225707:+|nuORF;ENST00000563288.5_1_16:68120670-68248329:+|nuORF;ENST00000563319.5_1_16:68118971-68248329:+|nuORF;ENST00000569766.5_1_16:68118971-68260371:+|nuORF;nc|ENSG00000072736|Q12968-2|NFATC3;nc|ENSG00000072736|Q12968-3|NFATC3;nc|ENSG00000072736|Q12968-4|NFATC3;nc|ENSG00000072736|Q12968-5|NFATC3;nc|ENSG00000072736|Q12968-6|NFATC3;NFATC3|p.L634Sfs*2|1|0.27|ENSG00000072736|chr16:68174493-68174494|-/T|frameshift_variant	52.936696900407355	0.27249468807391813	4				NaN	NaN	0	NaN	1276	2288	3560
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3567	14.063	NaN	13194	30	0	3510	0.14	+			22358	KTGTLTENK	9	70	496.27426108886266	NaN	0	496.76312255859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KTGTLTENK_	ATP10A|p.K791Rfs*28|1|0.23|ENSG00000206190|chr15:25708273-25708273|T/-|frameshift_variant;ATP10D|p.L1148*|1|0.28|ENSG00000145246|chr4:47576846-47576846|T/-|frameshift_variant;ATP10D|p.L617Cfs*41|2|0.28|ENSG00000145246|chr4:47557681-47557681|G/-|frameshift_variant;ATP10D|p.L863*|1|0.21|ENSG00000145246|chr4:47560990-47560990|T/-|frameshift_variant;ATP10D|p.L863Ffs*3|1|0.28|ENSG00000145246|chr4:47560989-47560990|-/T|frameshift_variant;ENSG00000118322|ENST00000327245|ATP10B;ENSG00000145246|ENST00000273859|ATP10D;ENSG00000206190|ENST00000555815|ATP10A;ENST00000521033.5_1_5:160061154-160212677:-|nuORF;nc|ENSG00000118322|O94823-2|ATP10B;nc|ENSG00000118322|O94823-3|ATP10B;nc|ENSG00000145246|Q9P241-2|ATP10D	126.24258497203832	0.0011674249988053026	4				NaN	NaN	0	NaN	1277	2288	3560
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3584	14.1	NaN	9569.9	30	0	3363.6	0.214	+			4355	ATGSANMTK	9	68	440.7127838081453	879.4110146830906	2	440.713134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATGSANMTK_	ENSG00000147059|ENST00000374906|SPIN2A;ENSG00000186787|ENST00000434397|SPIN2B;SPIN2B|p.L82Ifs*3|1|0.16|ENSG00000186787|chrX:57120383-57120386|AAAG/-|frameshift_variant	168.25843898104137	0.0030641937004078144	4				NaN	NaN	0	NaN	1291	2291	3583
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3585	14.103	NaN	4880.2	30	0	710.94	0.106	+			22359	KTGTLTENK	9	63	496.27426108886266	NaN	0	496.2743225097656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTGTLTENK_	ATP10A|p.K791Rfs*28|1|0.23|ENSG00000206190|chr15:25708273-25708273|T/-|frameshift_variant;ATP10D|p.L1148*|1|0.28|ENSG00000145246|chr4:47576846-47576846|T/-|frameshift_variant;ATP10D|p.L617Cfs*41|2|0.28|ENSG00000145246|chr4:47557681-47557681|G/-|frameshift_variant;ATP10D|p.L863*|1|0.21|ENSG00000145246|chr4:47560990-47560990|T/-|frameshift_variant;ATP10D|p.L863Ffs*3|1|0.28|ENSG00000145246|chr4:47560989-47560990|-/T|frameshift_variant;ENSG00000118322|ENST00000327245|ATP10B;ENSG00000145246|ENST00000273859|ATP10D;ENSG00000206190|ENST00000555815|ATP10A;ENST00000521033.5_1_5:160061154-160212677:-|nuORF;nc|ENSG00000118322|O94823-2|ATP10B;nc|ENSG00000118322|O94823-3|ATP10B;nc|ENSG00000145246|Q9P241-2|ATP10D	77.31757898189308	0.08057531075035683	4				NaN	NaN	0	NaN	1292	2291	3583
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3586	14.105	NaN	5804.5	30	0	1014.7	0.106	+			22635	KTVKDVQKA	9	66	508.8075367088981	1015.6005204845962	2	508.8082580566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KTVKDVQKA_	CCDC14|p.D363V|1|0.13|ENSG00000175455|chr3:123946937-123946937|T/A|missense_variant;CCDC14|p.E558Rfs*13|1|0.03|ENSG00000175455|chr3:123931229-123931230|-/T|frameshift_variant;CCDC14|p.E558Vfs*7|1|0.04|ENSG00000175455|chr3:123931228-123931229|-/TTGAATAA|frameshift_variant;CCDC14|p.N382Mfs*2|1|0.33|ENSG00000175455|chr3:123946880-123946880|T/-|frameshift_variant;CCDC14|p.V615Afs*13|1|0.05|ENSG00000175455|chr3:123915674-123915675|-/TAATGAG|frameshift_variant;ENSG00000175455|ENST00000409697|CCDC14;ENST00000495381.5_1_3:123633936-123674711:-|nuORF;nc|ENSG00000175455|Q49A88-2|CCDC14;nc|ENSG00000175455|Q49A88-3|CCDC14;nc|ENSG00000175455|Q49A88-4|CCDC14;nc|ENSG00000175455|Q49A88-6|CCDC14;nc|ENSG00000175455|Q49A88|CCDC14	74.1650062923329	0.12277912660386392	4				NaN	NaN	0	NaN	1293	2291	3583
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3587	14.107	NaN	6384.1	30	0	2081.4	0.106	+			32114	QSITKDKK	8	67	474.2790312021183	946.5435094710366	2	474.2792663574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QSITKDKK_	ENSG00000188738|ENST00000424728|FSIP2;FSIP2|p.D5579Mfs*10|1|0.09|ENSG00000188738|chr2:185806029-185806029|A/-|frameshift_variant;FSIP2|p.K6152Rfs*27|1|0.43|ENSG00000188738|chr2:185807758-185807758|A/-|frameshift_variant;FSIP2|p.K6528Nfs*5|1|0.33|ENSG00000188738|chr2:185808884-185808884|A/-|frameshift_variant;FSIP2|p.V5734Yfs*24|2|0.23|ENSG00000188738|chr2:185806499-185806499|A/-|frameshift_variant;FSIP2|p.V6322*|1|0.42|ENSG00000188738|chr2:185808265-185808265|A/-|frameshift_variant	87.75429964447693	0.2842685068779738	4				NaN	NaN	0	NaN	1294	2291	3583
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3588	14.109	NaN	884.17	30	0	126.75	0.106			+	31465	QKVLGKVK	8	46	450.3054504394531	NaN	0	450.3054504394531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QKVLGKVK_	REV__ENSG00000013503|ENST00000228347|POLR3B;REV__POLR3B|p.K691Nfs*7|1|0.25|ENSG00000013503|chr12:106444574-106444574|G/-|frameshift_variant;REV__POLR3B|p.M1020Nfs*18|1|0.13|ENSG00000013503|chr12:106501392-106501393|-/A|frameshift_variant;REV__POLR3B|p.T279Hfs*46|1|0.25|ENSG00000013503|chr12:106393136-106393137|-/T|frameshift_variant;REV__POLR3B|p.V869Sfs*8|1|0.27|ENSG00000013503|chr12:106463506-106463507|-/A|frameshift_variant	26.79610172149135	1.7418937515398478	4				NaN	NaN	0	NaN	1295	2291	3583
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3589	14.111	NaN	2342.1	30	0	267.41	0.035	+			41028	SVIAERNKK	9	66	522.8120401242503	NaN	0	522.812255859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVIAERNKK_	ENSG00000012779|ENST00000374391|ALOX5;nc|ENSG00000012779|P09917-2|ALOX5;nc|ENSG00000012779|P09917-3|ALOX5	60.11826168202944	0.14881452885248947	4				NaN	NaN	0	NaN	1296	2291	3583
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3590	14.111	NaN	1758.5	30	0	633.11	0.144	+			29353	PAAPPAVVRAP	11	39	349.2111024489996	NaN	0	348.8769836425781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PAAPPAVVRAP_	ENSG00000168314|ENST00000684792|MOBP;nc|ENSG00000168314|Q13875-2|MOBP;nc|ENSG00000168314|Q13875-4|MOBP	15.641811463095205	0.456735970842152	4				NaN	NaN	0	NaN	1297	2291	3583
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3604	14.143	NaN	26185	30	0	3692.2	0.214	+			19810	KEDEKKQEL	9	83	573.8031496439751	1145.59174635475	2	573.8038940429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEDEKKQEL_	ENSG00000138640|ENST00000264344|FAM13A;ENST00000508360.5_1_4:89653076-89671014:-|nuORF;ENST00000511573.5_1_4:89649686-89680064:-|nuORF;nc|ENSG00000138640|O94988-1|FAM13A;nc|ENSG00000138640|O94988-3|FAM13A;nc|ENSG00000138640|O94988-5|FAM13A;nc|ENSG00000138640|O94988-6|FAM13A	237.92461705609963	9.159202943229575E-14	4				NaN	NaN	0	NaN	1308	2294	3603
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3605	14.147	NaN	23936	30	0	18244	0.106	+			31541	QLLKGHDHLQ	10	58	396.887367844883	1187.640274134849	3	396.8876037597656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QLLKGHDHLQ_	ENSG00000116580|ENST00000368331|GON4L;ENST00000483032.1_1_1:155726967-155727102:-|nuORF;GON4L|p.E1831Rfs*8|1|0.18|ENSG00000116580|chr1:155756984-155756985|-/T|frameshift_variant;nc|ENSG00000116580|Q3T8J9-3|GON4L	35.15202426646627	0.5927656479315102	4				NaN	NaN	0	NaN	1309	2294	3603
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3606	14.149	NaN	9529.8	30	0	3687.3	0.106	+			10370	ETYNKRHLK	9	71	594.8272964422135	1187.640039951227	2	594.8280029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ETYNKRHLK_	ENST00000299505.6_1_19:34745491-34790780:+|nuORF;ENST00000592124.1_1_19:34756504-34790780:+|nuORF	101.45984612302182	0.0377122763612125	4				NaN	NaN	0	NaN	1310	2294	3603
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3607	14.151	NaN	10936	30	0	2473.6	0.106	+			49188	VVMRDPQTK	9	57	545.2891208737593	1088.5636888143185	2	545.2902221679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_VVM(Oxidation (M))RDPQTK_	ENSG00000170144|ENST00000392524|HNRNPA3;ENST00000437410.2_1_1:54441353-54441674:-|nuORF;ENST00000472163.1_1_3:75263799-75264780:+|nuORF;HNRNPA3|p.K200Rfs*147|1|0.13|ENSG00000170144|chr2:177216544-177216544|A/-|frameshift_variant;HNRNPA3|p.Y267Lfs*2|1|0.62|ENSG00000170144|chr2:177216918-177216919|-/T|frameshift_variant;nc|ENSG00000170144|P51991-2|HNRNPA3	72.87924865735499	0.12833875048249987	4				NaN	NaN	0	NaN	1311	2294	3603
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3608	14.152	NaN	41044	30	0	11146	0.106			+	5742	AVGAPAVAGVR	11	78	484.28730784506524	966.5600627569305	2	484.2876281738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVGAPAVAGVR_	REV__ENST00000357575.8_1_18:77663724-77663979:-|nuORF	60.97194046774394	0.3147792151722205	4				NaN	NaN	0	NaN	1312	2294	3603
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3609	14.154	NaN	18931	30	0	5558.9	0.037	+			46748	VGSEGLSKEQL	11	63	382.87142492221165	1145.592445366835	3	382.8715515136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VGSEGLSKEQL_	BCL9L|p.G442Afs*21|2|0.19|ENSG00000186174|chr11:118902418-118902418|C/-|frameshift_variant;BCL9L|p.G481Afs*21|1|0.4|ENSG00000186174|chr11:118902301-118902301|C/-|frameshift_variant;BCL9L|p.P1127Hfs*21|1|0.43|ENSG00000186174|chr11:118899943-118899943|G/-|frameshift_variant;BCL9L|p.P1198Lfs*5|3|0.34|ENSG00000186174|chr11:118899327-118899327|C/-|frameshift_variant;BCL9L|p.P1249Lfs*32|1|0.58|ENSG00000186174|chr11:118899171-118899171|C/-|frameshift_variant;BCL9L|p.P1355Lfs*6|1|0.23|ENSG00000186174|chr11:118898851-118898851|G/-|frameshift_variant;BCL9L|p.P449Lfs*14|1|0.26|ENSG00000186174|chr11:118902397-118902397|G/-|frameshift_variant;BCL9L|p.P483Rfs*19|1|0.35|ENSG00000186174|chr11:118902295-118902295|G/-|frameshift_variant;BCL9L|p.P894Lfs*17|1|0.29|ENSG00000186174|chr11:118901062-118901062|G/-|frameshift_variant;BCL9L|p.Q452Sfs*11|3|0.43|ENSG00000186174|chr11:118902389-118902389|G/-|frameshift_variant;ENSG00000186174|ENST00000683865|BCL9L;nc|ENSG00000186174|Q86UU0-2|BCL9L;nc|ENSG00000186174|Q86UU0-3|BCL9L;nc|ENSG00000186174|Q86UU0-4|BCL9L	39.252832667884924	0.5681665794958463	4				NaN	NaN	0	NaN	1313	2294	3603
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3610	14.155	NaN	6351.5	30	0	734.21	0.141	+			27051	MAAVVENVVK	10	68	530.2994886321642	NaN	0	530.2993774414062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MAAVVENVVK_	ENSG00000133884|ENST00000528416|DPF2;ENST00000444314.6_1_11:65101357-65109054:+|nuORF;ENST00000530993.5_1_11:65101357-65108506:+|nuORF;nc|ENSG00000133884|Q92785-2|DPF2	38.753607047826485	0.3729281687199363	4				NaN	NaN	0	NaN	1314	2294	3603
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3628	14.194	NaN	39062	30	0	5937.9	0.214	+			20994	KKGKADTGKK	10	80	530.8268123901718	1059.6390718471434	2	530.8280029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KKGKADTGKK_	ENST00000398005.3_1_13:59584546-59584735:+|nuORF	112.10723106719422	0.0417416748461292	4				NaN	NaN	0	NaN	1329	2297	3627
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3629	14.198	NaN	115690	30	0	49516	0.106			+	26042	LSLIYSAEN	9	79	337.1780867933315	1008.5124309801945	3	337.17864990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSLIYSAEN_	REV__ENST00000250495.9_1_14:24686256-24686349:-|nuORF	21.9598887501803	0.5980208138527809	4				NaN	NaN	0	NaN	1330	2297	3627
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3630	14.2	NaN	7277.9	30	0	1300.2	0.106	+			16337	HEKTEDNKL	9	69	557.280481039167	1112.5464091451338	2	557.2811279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HEKTEDNKL_	ENSG00000123200|ENST00000679008|ZC3H13;nc|ENSG00000123200|Q5T200|ZC3H13	117.81106730687013	0.02252488733980868	4				NaN	NaN	0	NaN	1331	2297	3627
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3631	14.201	NaN	15253	30	0	1351.4	0.106	+			43284	TFGKKKGPNA	10	88	524.2988923975436	1046.583231861887	2	524.3014526367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TFGKKKGPNA_	ENSG00000149806|ENST00000529639|FAU	133.7523857240709	0.012419833933541829	4				NaN	NaN	0	NaN	1332	2297	3627
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3632	14.203	NaN	9176.7	30	0	1318.1	0.106	+			40408	STVGGQSVKK	10	81	495.78218094897005	989.5498089647401	2	495.7823486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STVGGQSVKK_	ENSG00000048649|ENST00000308488|RSF1;nc|ENSG00000048649|Q96T23-2|RSF1;nc|ENSG00000048649|Q96T23-3|RSF1;RSF1|p.V664Sfs*11|1|0.19|ENSG00000048649|chr11:77701239-77701240|-/T|frameshift_variant	101.45984612302182	0.07336148045341315	4				NaN	NaN	0	NaN	1333	2297	3627
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3633	14.205	NaN	5119.8	30	0	707.63	0.037	+			16338	HEKTEDNKL	9	63	371.8558345780352	1112.5456743343057	3	371.85614013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HEKTEDNKL_	ENSG00000123200|ENST00000679008|ZC3H13;nc|ENSG00000123200|Q5T200|ZC3H13	32.81241826257853	0.4965981579233955	4				NaN	NaN	0	NaN	1334	2297	3627
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3634	14.206	NaN	5767.5	30	0	1993.6	0.141	+			13317	GKISTNYLNP	10	60	553.794716583712	1105.5748802342239	2	553.795654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GKISTNYLNP_	ZSCAN26|p.E207Tfs*44|1|0.08|ENSG00000197062|chr6:28276276-28276277|-/CACCAATTACT|frameshift_variant	37.81151784470057	0.569310847604193	4				NaN	NaN	0	NaN	1335	2297	3627
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3652	14.244	NaN	15553	30	0	2190.2	0.214	+			34210	RTDTASRLK	9	69	349.86731926247603	1046.580128387628	3	349.8683166503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTDTASRLK_	ENSG00000054654|ENST00000555002|SYNE2;ENST00000394768.6_2_14:64542710-64692241:+|nuORF;ENST00000554805.6_2_14:64676062-64692241:+|nuORF;ENST00000555022.5_2_14:64671104-64692241:+|nuORF;nc|ENSG00000054654|Q8WXH0-13|SYNE2;nc|ENSG00000054654|Q8WXH0-3|SYNE2;nc|ENSG00000054654|Q8WXH0-4|SYNE2;nc|ENSG00000054654|Q8WXH0-7|SYNE2;nc|ENSG00000054654|Q8WXH0|SYNE2;SYNE2|p.S6651Rfs*83|1|0.29|ENSG00000054654|chr14:64220596-64220597|-/G|frameshift_variant	86.88156770896713	0.07365720931774442	4				NaN	NaN	0	NaN	1350	2300	3651
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3653	14.248	NaN	3041.4	30	0	1054.1	0.106				-1	VTDCVSCK	8	57	484.7121302717811	967.4097076103623	2	484.7125549316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_VTDC(Carbamidomethyl (C))VSC(Carbamidomethyl (C))K_	nc|ENSG00000160179|P45844-8|ABCG1	47.91560031466742	0.6071945918984287	4				NaN	NaN	0	NaN	1351	2300	3651
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3654	14.25	NaN	5529	30	0	944.99	0.106			+	43278	TFGGRGGGG	9	49	383.1853374412296	764.3561219492592	2	383.18548583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TFGGRGGGG_	REV__AluSx_dup71151|chr11:64318596-64318908:-|1.2767231101948278|0.4573538105707593|1.48|479.0|9|3|sense	31.954861631926434	0.5046124803899898	4				NaN	NaN	0	NaN	1352	2300	3651
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3655	14.251	NaN	3335.6	30	0	900.35	0.106	+			40371	STTTSSTPPK	10	54	503.75534521715923	1005.4961375011185	2	503.7562561035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STTTSSTPPK_	ENSG00000121957|ENST00000264126|GPSM2;GPSM2|p.F632Sfs*31|1|0.44|ENSG00000121957|chr1:108929776-108929776|T/-|frameshift_variant	65.15724298150197	0.31893571707528906	4				NaN	NaN	0	NaN	1353	2300	3651
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3656	14.253	NaN	4928.3	30	0	431.74	0.106	+			35650	SCQKPIAGK	9	64	466.25438433842686	930.4942157436537	2	466.2549133300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SCQKPIAGK_	ENSG00000110031|ENST00000395074|LPXN;ENST00000530561.5_1_11:58294929-58321330:-|nuORF;nc|ENSG00000110031|O60711-2|LPXN	47.95952297671804	0.32689736945648856	4				NaN	NaN	0	NaN	1354	2300	3651
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3657	14.255	NaN	2547.2	30	0	371.15	0.034	+			3544	ASSVRTPAK	9	55	458.7636283593614	915.5127037855228	2	458.76409912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASSVRTPAK_	ENST00000589838.5_1_19:11548789-11552125:+|nuORF	74.1650062923329	0.12277912660386392	4				NaN	NaN	0	NaN	1355	2300	3651
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3658	14.256	NaN	8024	30	0	3004.3	0.143				-1	AVLRLSCR	8	57	325.52393288693133	973.549969260994	3	325.525146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_AVLRLSC(Carbamidomethyl (C))R_	ENSG00000135476|ENST00000257934|ESPL1;nc|ENSG00000135476|Q14674-2|ESPL1	38.80614096846853	0.6637206697844082	4				NaN	NaN	0	NaN	1356	2300	3651
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3676	14.294	NaN	36041	30	0	5577	0.214	+			39382	STDKQTCLK	9	83	540.7704771771245	1079.5264014210488	2	540.7716674804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_STDKQTC(Carbamidomethyl (C))LK_	ENSG00000198788|ENST00000675028|MUC2;nc|ENSG00000198788|Q02817|MUC2	176.44474024533739	0.0016668318535579616	4				NaN	NaN	0	NaN	1371	2303	3675
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3677	14.298	NaN	13023	30	0	4246.4	0.106	+			25205	LMKVMKTK	8	77	497.79272767995104	993.5709024267021	2	497.79290771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LM(Oxidation (M))KVMKTK_	CENPF|p.S2957Afs*6|1|0.52|ENSG00000117724|chr1:214657310-214657310|A/-|frameshift_variant;CENPF|p.T1974Pfs*11|1|0.22|ENSG00000117724|chr1:214645483-214645483|A/-|frameshift_variant;CENPF|p.T2189Hfs*3|1|0.28|ENSG00000117724|chr1:214646131-214646131|A/-|frameshift_variant;ENSG00000117724|ENST00000366955|CENPF	55.50420428727701	0.5462892107279674	4				NaN	NaN	0	NaN	1372	2303	3675
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3678	14.3	NaN	8588.4	30	0	1712.1	0.106			+	9958	EREAGPAPTQQ	11	77	592.2888901806035	1182.563227428007	2	592.2897338867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EREAGPAPTQQ_	REV__nc|ENSG00000112425|B3EWF7|EPM2A	37.50817390946774	0.5920388381045607	4				NaN	NaN	0	NaN	1373	2303	3675
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3679	14.302	NaN	1796.9	30	0	289.57	0.106			+	-1	QLSPMMPR	8	66	488.2404520482806	NaN	0	488.24041748046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_QLSPM(Oxidation (M))MPR_	REV__ENST00000374601.7_1_1:23730426-23730582:-|nuORF	63.30626980617807	1.7418937515398478	4				NaN	NaN	0	NaN	1374	2303	3675
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3680	14.303	NaN	3053.7	30	0	354.18	0.106			+	30617	QARRVSEAAGL	11	65	579.3233993383475	NaN	0	579.3233032226562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QARRVSEAAGL_	REV__ENSG00000179163|ENST00000374479|FUCA1	33.03940026070387	0.41817340257782254	4				NaN	NaN	0	NaN	1375	2303	3675
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3681	14.305	NaN	4634.2	30	0	999.26	0.035				-1	KMLIVLVQS	9	69	523.8199651508586	NaN	0	523.820068359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_KM(Oxidation (M))LIVLVQS_	ENST00000421852.5_1_3:185208641-185208755:-|nuORF	44.116797842482775	0.2472372736944149	4				NaN	NaN	0	NaN	1376	2303	3675
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3682	14.306	NaN	2076.9	30	0	543.19	0.139				-1	 	0	47	436.23463771239295	870.4547224915859	2	436.23486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1377	2303	3675
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3699	14.342	NaN	4029.6	30	0	2734.2	0.214				-1	 	0	41	326.68636075936183	651.3581685855237	2	326.6868591308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1391	2306	3698
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3700	14.345	NaN	9900.2	30	0	3960.3	0.106			+	5327	ATVMFYLAP	9	48	338.17661572581494	1011.5080177776449	3	338.1771545410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATVMFYLAP_	REV__ENST00000480599.6_1_7:80276056-80276293:+|nuORF	35.61828744233558	0.47037581924408073	4				NaN	NaN	0	NaN	1392	2306	3698
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3701	14.347	NaN	2399.7	30	0	521.67	0.106	+			7625	DKGSSSHNKPK	11	55	592.8043212890625	NaN	0	592.8043212890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DKGSSSHNKPK_	CYLD|p.I702*|1|0.1|ENSG00000083799|chr16:50787844-50787844|A/-|frameshift_variant;CYLD|p.N722Mfs*13|3|0.37|ENSG00000083799|chr16:50791608-50791608|A/-|frameshift_variant;CYLD|p.T340Nfs*11|1|0.11|ENSG00000083799|chr16:50776272-50776273|-/AAAT|frameshift_variant;ENSG00000083799|ENST00000427738|CYLD;ENST00000563629.1_1_16:50783909-50820919:+|nuORF;ENST00000563976.1_1_16:50810130-50811860:+|nuORF;ENST00000569891.5_1_16:50783609-50818363:+|nuORF;nc|ENSG00000083799|Q9NQC7-2|CYLD	63.53385203322761	0.1989067641070983	4				NaN	NaN	0	NaN	1393	2306	3698
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3702	14.349	NaN	5868.9	30	0	1075.2	0.106	+			38776	SSMAETQSK	9	62	484.7203493684538	967.4261458037076	2	484.7207946777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSMAETQSK_	ENST00000507863.1_1_5:10378003-10378912:+|nuORF	120.30596017624542	0.02101454110788768	4				NaN	NaN	0	NaN	1394	2306	3698
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3703	14.351	NaN	1665.8	30	0	382.61	0.106			+	-1	KVFLLCQK	8	50	518.3055614785618	1034.5965700239235	2	518.301025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_KVFLLC(Carbamidomethyl (C))QK_	REV__ENST00000485245.2_1_2:98376091-98376469:-|nuORF	42.47446043378293	0.6409579893742323	4				NaN	NaN	0	NaN	1395	2306	3698
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3704	14.353	NaN	1519.8	30	0	285.3	0.032				-1	 	0	42	414.17906219095386	826.3435714487077	2	413.7117919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1396	2306	3698
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3705	14.353	NaN	10803	30	0	2359.6	0.14				-1	LSDCSVKSC	9	68	528.228204605611	1054.441856278022	2	528.229248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C)	_LSDC(Carbamidomethyl (C))SVKSC(Carbamidomethyl (C))_	ENST00000514430.5_1_4:103552967-103553108:-|nuORF	44.116797842482775	0.37197099687881774	4				NaN	NaN	0	NaN	1397	2306	3698
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3720	14.387	NaN	138590	30	0	34290	0.192	+			6173	AVQKKTFTK	9	99	525.8183232417606	1049.622093550321	2	525.8190307617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVQKKTFTK_	ENSG00000115306|ENST00000356805|SPTBN1;ENSG00000160460|ENST00000598249|SPTBN4;ENSG00000173898|ENST00000533211|SPTBN2;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1;nc|ENSG00000160460|Q9H254-2|SPTBN4;nc|ENSG00000160460|Q9H254-4|SPTBN4;nc|ENSG00000173898|O15020-2|SPTBN2;SPTBN1|p.K503Rfs*24|1|0.06|ENSG00000115306|chr2:54626095-54626095|G/-|frameshift_variant;SPTBN2|p.P924Qfs*35|1|0.39|ENSG00000173898|chr11:66701629-66701629|G/-|frameshift_variant	171.33049012695201	0.0025398094975457087	4				NaN	NaN	0	NaN	1409	2309	3719
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3721	14.39	NaN	152940	30	0	26867	0.106				-1	 	0	116	350.88115452065847	1049.6216341621755	3	350.8816223144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1410	2309	3719
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3722	14.392	NaN	11421	30	0	1933.2	0.106	+			39737	STISSNASK	9	61	447.72960698296384	893.4446610327277	2	447.7297668457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STISSNASK_	ENSG00000101166|ENST00000355937|PRELID3B;nc|ENSG00000101166|Q9Y3B1-2|PRELID3B	89.02883481214508	0.06760336634167786	4				NaN	NaN	0	NaN	1411	2309	3719
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3723	14.394	NaN	12301	30	0	2120.5	0.106	+			3874	ATAPAPTAHK	10	68	482.76283817578513	963.5111234183703	2	482.76385498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATAPAPTAHK_	ENSG00000184897|ENST00000333762|H1-10	120.8684288430529	0.026103207050128037	4				NaN	NaN	0	NaN	1412	2309	3719
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3724	14.395	NaN	12177	30	0	3157.7	0.106				-1	RSRCSSCC	8	54	479.6879953076451	957.3614376820902	2	479.6873779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_RSRCSSC(Carbamidomethyl (C))C_	ENST00000511525.1_1_5:43446326-43483989:-|nuORF	37.15910966729921	0.6739408393984688	4				NaN	NaN	0	NaN	1413	2309	3719
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3725	14.397	NaN	4495.3	30	0	399.39	0.106			+	39893	STLSSTPSH	9	67	458.7209754057973	915.4273978783946	2	458.72064208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STLSSTPSH_	REV__AMOT|p.L850Cfs*59|1|0.13|ENSG00000126016|chrX:112779606-112779606|G/-|frameshift_variant;REV__AMOT|p.Q392Lfs*49|1|0.09|ENSG00000126016|chrX:112815575-112815576|-/TCCA|frameshift_variant;REV__AMOT|p.S319Pfs*56|1|0.11|ENSG00000126016|chrX:112815796-112815796|C/-|frameshift_variant;REV__ENSG00000126016|ENST00000371959|AMOT	65.80317337860623	0.1652391959156183	4				NaN	NaN	0	NaN	1414	2309	3719
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3726	14.399	NaN	4952.6	30	0	1194.8	0.032	+			140	AAGPVSQGK	9	54	407.72400295471516	813.4334529762303	2	407.724365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AAGPVSQGK_	ENSG00000100393|ENST00000263253|EP300	69.6276240434122	0.14239879520340665	4				NaN	NaN	0	NaN	1415	2309	3719
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3741	14.431	NaN	35488	30	0	12161	0.214	+			13959	GSAKPGLQK	9	80	443.26081659610395	884.5070802590079	2	443.2610778808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSAKPGLQK_	ENSG00000104267|ENST00000285379|CA2	143.8867514904718	0.008656634767784652	4				NaN	NaN	0	NaN	1427	2312	3740
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3742	14.434	NaN	26698	30	0	15562	0.106	+			20623	KGEVSARRL	9	67	508.30335164852977	1014.5921503638596	2	508.3039245605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KGEVSARRL_	ENST00000469852.5_1_20:61463352-61467329:+|nuORF;ENST00000472880.1_1_20:61464332-61467329:+|nuORF;ENST00000481800.1_1_20:61463177-61467329:+|nuORF	45.97224482568171	0.3502073465782774	4				NaN	NaN	0	NaN	1428	2312	3740
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3743	14.436	NaN	27296	30	0	9272	0.106				-1	 	0	61	339.20443644249764	1014.591479927693	3	339.2050476074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1429	2312	3740
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3744	14.438	NaN	4583.2	30	0	758.56	0.106	+			21969	KSDPVDPDK	9	66	500.7505408534242	999.4865287736484	2	500.75091552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KSDPVDPDK_	ENSG00000065526|ENST00000375759|SPEN;SPEN|p.A2251Qfs*102|3|0.29|ENSG00000065526|chr1:15932985-15932985|C/-|frameshift_variant	70.8162118820467	0.13725933411854815	4				NaN	NaN	0	NaN	1430	2312	3740
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3745	14.44	NaN	7517	30	0	2114.2	0.106	+			16089	HDELEAPSMKT	11	84	637.2910066707873	1272.5674604083745	2	637.2919311523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_HDELEAPSM(Oxidation (M))KT_	ENSG00000189068|ENST00000338372|VSTM1;nc|ENSG00000189068|Q6UX27-2|VSTM1;nc|ENSG00000189068|Q6UX27-3|VSTM1	82.24051045832904	0.13369445791701148	4				NaN	NaN	0	NaN	1431	2312	3740
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3746	14.442	NaN	1226.8	30	0	247.61	0.036			+	11930	FVGPSVTPRL	10	43	536.8101806640625	NaN	0	536.8101806640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FVGPSVTPRL_	REV__ENST00000265195.9_1_5:138532141-138532198:-|nuORF	20.94693142431847	0.4201028297492154	4				NaN	NaN	0	NaN	1432	2312	3740
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3747	14.442	NaN	5272	30	0	2500	0.14			+	7394	DEDKIMKM	8	65	505.23803651730145	1008.4615201014029	2	505.23834228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DEDKIMKM_	REV__ENSG00000178175|ENST00000318442|ZNF366;REV__ZNF366|p.F198Ifs*43|1|0.37|ENSG00000178175|chr5:72460905-72460906|-/T|frameshift_variant;REV__ZNF366|p.S715Lfs*13|1|0.09|ENSG00000178175|chr5:72443848-72443848|A/-|frameshift_variant	49.44154591367651	0.597725784090933	4				NaN	NaN	0	NaN	1433	2312	3740
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3761	14.474	NaN	13098	30	0	4048.4	0.214	+			5000	ATSAPEETK	9	61	467.2293268113051	932.4441006894102	2	467.2295837402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSAPEETK_	ENSG00000021776|ENST00000156471|AQR;ENST00000543879.6_1_15:35148995-35166226:-|nuORF	131.03138772384656	0.014687601201650916	4				NaN	NaN	0	NaN	1444	2315	3760
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3762	14.477	NaN	10554	30	0	988.88	0.106	+			5113	ATSQQPLRK	9	78	514.7952019259696	1027.5758509187392	2	514.7959594726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATSQQPLRK_	ENSG00000164402|ENST00000378719|SEPTIN8;nc|ENSG00000164402|Q92599-2|SEPTIN8;nc|ENSG00000164402|Q92599-3|SEPTIN8;nc|ENSG00000164402|Q92599-4|SEPTIN8	61.691277971877994	0.19951612995419254	4				NaN	NaN	0	NaN	1445	2315	3760
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3763	14.479	NaN	17238	30	0	1450.7	0.106	+			19869	KEELYKLL	8	81	518.3055614785618	1034.5965700239235	2	518.306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEELYKLL_	ENST00000568971.5_1_16:19075311-19078921:-|nuORF	82.24051045832904	0.30490469762271794	4				NaN	NaN	0	NaN	1446	2315	3760
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3764	14.481	NaN	18638	30	0	7730.5	0.106				-1	MILVMVVILQ	10	80	397.5675785477284	1189.6809062433852	3	397.56793212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Oxidation (M)	_M(Oxidation (M))ILVM(Oxidation (M))VVILQ_	SLAMF1|p.I253V|1|0.37|ENSG00000117090|chr1:160624129-160624129|T/C|missense_variant	58.22992032128504	0.38193887838457763	4				NaN	NaN	0	NaN	1447	2315	3760
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3765	14.483	NaN	8101	30	0	1913.8	0.106	+			3509	ASSKDAIKK	9	74	474.2790312021183	946.5435094710366	2	474.27947998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASSKDAIKK_	DSTN|p.Y117H|1|0.26|ENSG00000125868|chr20:17604592-17604592|T/C|missense_variant;ENSG00000125868|ENST00000246069|DSTN;ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000400899.2_1_1:11051144-11051557:-|nuORF;ENST00000530945.1_1_11:65623104-65623215:-|nuORF;nc|ENSG00000125868|P60981-2|DSTN;nc|ENSG00000165410|Q9Y281-3|CFL2	58.2462437865262	0.22823408064396822	4				NaN	NaN	0	NaN	1448	2315	3760
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3766	14.485	NaN	6765.3	30	0	694.35	0.106	+			24287	LEYKNVPT	8	77	482.25935588179567	NaN	0	482.25933837890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LEYKNVPT_	ENSG00000164303|ENST00000296741|ENPP6	47.657333605630114	1.7418937515398478	4				NaN	NaN	0	NaN	1449	2315	3760
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3767	14.486	NaN	5966.9	30	0	1072.7	0.038	+			23167	KVYTKSSHLK	10	66	595.8475726158933	1189.6805922985866	2	595.8485107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KVYTKSSHLK_	ENSG00000067082|ENST00000497571|KLF6;ENSG00000102349|ENST00000468660|KLF8;ENSG00000102554|ENST00000377687|KLF5;ENSG00000109787|ENST00000261438|KLF3;ENSG00000118263|ENST00000309446|KLF7;ENSG00000118922|ENST00000703967|KLF12;ENST00000358094.7_1_X:56295423-56310924:+|nuORF;ENST00000462627.5_1_X:56295800-56310924:+|nuORF;nc|ENSG00000067082|Q99612-2|KLF6;nc|ENSG00000067082|Q99612-3|KLF6;nc|ENSG00000102554|Q13887-2|KLF5;nc|ENSG00000102554|Q13887-4|KLF5;nc|ENSG00000118263|O75840-2|KLF7;nc|ENSG00000118263|O75840-4|KLF7	136.98908636845044	0.01155686115611441	4				NaN	NaN	0	NaN	1450	2315	3760
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3782	14.518	NaN	35881	30	0	13930	0.214				-1	 	0	64	326.18171952454935	975.5233291738481	3	326.18218994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1462	2318	3781
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3783	14.522	NaN	6874.9	30	0	1312.7	0.106	+			20023	KEIRDIMF	8	74	526.284532587394	1050.5545122415879	2	526.2852783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEIRDIMF_	tr|U7SVT1|U7SVT1_FUSNUHD/PDEasedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01329PE=4SV=1	50.0245360154114	0.5941082100236891	4				NaN	NaN	0	NaN	1463	2318	3781
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3784	14.524	NaN	29630	30	0	6035.2	0.106	+			21699	KQFYSLLVT	9	78	549.812889244098	1097.6112255549958	2	549.8139038085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KQFYSLLVT_	ENSG00000061987|ENST00000393630|MON2;ENST00000547095.5_1_12:62864501-62986526:+|nuORF;MON2|p.A1027Vfs*94|1|0.03|ENSG00000061987|chr12:62553043-62553044|-/TTCTTTTT|frameshift_variant;MON2|p.E989Nfs*2|1|0.16|ENSG00000061987|chr12:62552924-62552924|A/-|frameshift_variant;MON2|p.T1274Qfs*3|1|0.36|ENSG00000061987|chr12:62560894-62560894|T/-|frameshift_variant;MON2|p.V1435Afs*17|1|0.03|ENSG00000061987|chr12:62566430-62566431|-/CATCT|frameshift_variant;nc|ENSG00000061987|Q7Z3U7-2|MON2;nc|ENSG00000061987|Q7Z3U7-5|MON2;nc|ENSG00000061987|Q7Z3U7-6|MON2	96.0336014099291	0.047854655524928534	4				NaN	NaN	0	NaN	1464	2318	3781
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3785	14.526	NaN	25492	30	0	12048	0.106			+	19354	KAKRHMEAK	9	77	366.8776891606941	1097.6112380822824	3	366.8780517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KAKRHMEAK_	REV__ARCN1|p.R160H|1|0.39|ENSG00000095139|chr11:118583840-118583840|G/A|missense_variant	69.6276240434122	0.14239879520340665	4				NaN	NaN	0	NaN	1465	2318	3781
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3786	14.527	NaN	9632.4	30	0	1836.6	0.106				-1	 	0	75	544.3320233694822	1086.6494938057642	2	544.3330688476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1466	2318	3781
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3787	14.529	NaN	31814	30	0	6893.4	0.034				-1	 	0	87	478.30546002009294	954.5963671069859	2	478.30548095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1467	2318	3781
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3788	14.53	NaN	3729.7	30	0	1325.3	0.143			+	-1	KMLAIIESY	9	46	375.86761058477657	NaN	0	375.8680419921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))KM(Oxidation (M))LAIIESY_	REV__ENSG00000204020|ENST00000404459|LIPN;REV__LIPN|p.R385Q|1|0.17|ENSG00000204020|chr10:88778199-88778199|G/A|missense_variant	25.57405402267927	0.3484490411150625	4				NaN	NaN	0	NaN	1468	2318	3781
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3804	14.563	NaN	279780	30	0	83723	0.08	+			15386	GTYDAKVKK	9	57	337.1934514598142	1008.5585249796426	3	337.1941833496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTYDAKVKK_	ENSG00000159713|ENST00000393957|TPPP3	45.9519527083369	0.35044536499095585	4				NaN	NaN	0	NaN	1481	2321	3803
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3805	14.564	NaN	59953	30	0	18300	0.066				-1	 	0	67	505.2868145737785	1008.559076214357	2	505.2872619628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1482	2321	3803
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3806	14.566	NaN	44362	30	0	11134	0.106				-1	 	0	63	331.19005249935856	990.5483280982758	3	331.1905517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1483	2321	3803
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3807	14.568	NaN	11606	30	0	3855.3	0.106				-1	 	0	71	426.2524108737419	850.4902688142838	2	426.2528076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1484	2321	3803
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3808	14.569	NaN	7590.6	30	0	2703.1	0.106			+	21087	KKNTTGPASQ	10	69	516.2777721592082	1030.5409913852163	2	516.2785034179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KKNTTGPASQ_	REV__ENST00000508970.1_1_2:79924974-80004158:+|nuORF	88.17693792209575	0.14151128060301246	4				NaN	NaN	0	NaN	1485	2321	3803
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3809	14.571	NaN	8205.6	30	0	2353.3	0.106				-1	PEDDTSMAIL	10	59	554.2474110034393	1106.4802690736785	2	554.2482299804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_PEDDTSM(Oxidation (M))AIL_	ENSG00000186642|ENST00000334456|PDE2A;ENST00000539367.5_1_11:72287653-72353469:-|nuORF;nc|ENSG00000186642|O00408-2|PDE2A;nc|ENSG00000186642|O00408-3|PDE2A;nc|ENSG00000186642|O00408-4|PDE2A;nc|ENSG00000186642|O00408-5|PDE2A;nc|ENSG00000186642|O00408-6|PDE2A	23.04248740728303	0.69165701907106	4				NaN	NaN	0	NaN	1486	2321	3803
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3810	14.573	NaN	8822.2	30	0	2117.2	0.106	+			3088	ASGGAAYTK	9	75	413.20807461693136	824.4015963006627	2	413.2086181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASGGAAYTK_	ENSG00000054118|ENST00000354618|THRAP3;THRAP3|p.T757Nfs*6|1|0.18|ENSG00000054118|chr1:36296730-36296731|-/A|frameshift_variant	129.42129120953632	0.01549634589885217	4				NaN	NaN	0	NaN	1487	2321	3803
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3811	14.575	NaN	2880	30	0	358.13	0.037	+			9868	EQETSVRKR	9	58	566.8063860554919	1131.5982191777837	2	566.807373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_EQETSVRKR_	DST|p.K5076Nfs*24|1|0.31|ENSG00000151914|chr6:56472218-56472218|T/-|frameshift_variant;DST|p.L1539Ffs*11|1|0.39|ENSG00000151914|chr6:56611525-56611526|-/A|frameshift_variant;DST|p.N1220Tfs*9|1|0.23|ENSG00000151914|chr6:56630354-56630354|T/-|frameshift_variant;DST|p.T4428Nfs*23|1|0.12|ENSG00000151914|chr6:56497896-56497897|-/T|frameshift_variant;ENSG00000151914|ENST00000680361|DST;nc|ENSG00000151914|Q03001-11|DST	42.86426827375447	0.38666266728046506	4				NaN	NaN	0	NaN	1488	2321	3803
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3826	14.606	NaN	52189	30	0	10534	0.214	+			43762	TLGPCPQVDPG	11	101	542.2611931273163	1082.5078333214326	2	542.2625732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TLGPCPQVDPG_	ENST00000514938.1_1_22:50943492-50943879:-|nuORF	101.25262130126117	0.05809749477734788	4				NaN	NaN	0	NaN	1500	2324	3825
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3827	14.61	NaN	12867	30	0	4035	0.106	+			49335	VVSETNDTK	9	63	496.7477955586088	991.4810381840176	2	496.748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVSETNDTK_	ENSG00000111057|ENST00000388835|KRT18;ENST00000453838.2_1_1:182928211-182928406:-|nuORF	114.85826248499774	0.024312442104607014	4				NaN	NaN	0	NaN	1501	2324	3825
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3828	14.612	NaN	6838.9	30	0	1693	0.106			+	30093	PQVMGPQDVGP	11	78	570.7718279709575	1139.5291030087149	2	570.7732543945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_PQVM(Oxidation (M))GPQDVGP_	REV__ENSG00000129646|ENST00000680821|QRICH2;REV__nc|ENSG00000129646|Q9H0J4-2|QRICH2;REV__nc|ENSG00000129646|Q9H0J4|QRICH2	95.81516180277367	0.07496903150603954	4				NaN	NaN	0	NaN	1502	2324	3825
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3829	14.614	NaN	2189.3	30	0	479.48	0.106			+	38732	SSLKQELPLGE	11	39	600.8258056640625	NaN	0	600.8258056640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSLKQELPLGE_	REV__ENST00000262494.12_3_16:56381453-56381795:+|nuORF	40.05817265558897	0.3867246477658885	4				NaN	NaN	0	NaN	1503	2324	3825
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3830	14.616	NaN	7204.6	30	0	942.21	0.106				-1	 	0	63	440.76569614496844	879.5168393567369	2	440.76593017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1504	2324	3825
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3831	14.617	NaN	3198.5	30	0	326.49	0.035			+	47570	VRGVHLVGAQ	10	63	518.3055614785618	1034.5965700239235	2	518.76416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VRGVHLVGAQ_	REV__ENSG00000175766|ENST00000318682|EIF4E1B	49.44154591367651	0.46214596422418036	4				NaN	NaN	0	NaN	1505	2324	3825
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3832	14.618	NaN	7225.6	30	0	1216.3	0.139			+	51355	YTAAGDAR	8	66	412.6980792732777	823.3816056133554	2	412.6983337402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YTAAGDAR_	REV__ENSG00000063176|ENST00000245222|SPHK2;REV__nc|ENSG00000063176|Q9NRA0-2|SPHK2;REV__nc|ENSG00000063176|Q9NRA0-3|SPHK2;REV__nc|ENSG00000063176|Q9NRA0-4|SPHK2;REV__nc|ENSG00000063176|Q9NRA0-5|SPHK2;REV__SPHK2|p.V492*|1|0.22|ENSG00000063176|chr19:48629277-48629277|C/-|frameshift_variant	45.9519527083369	0.6193794311207887	4				NaN	NaN	0	NaN	1506	2324	3825
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3850	14.657	NaN	30744	30	0	13285	0.201	+			3754	ATAEKCLHK	9	79	500.7650883087824	999.5156236843649	2	500.76568603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATAEKCLHK_	ENSG00000180098|ENST00000373830|TRNAU1AP;ENST00000464880.5_1_1:28879622-28887433:+|nuORF;ENST00000480930.5_1_1:28879622-28887666:+|nuORF;ENST00000484775.1_1_1:28887181-28904036:+|nuORF;ENST00000491577.5_1_1:28879622-28887259:+|nuORF;ENST00000495995.5_1_1:28880088-28887666:+|nuORF;TRNAU1AP|p.Q222Sfs*29|1|0.24|ENSG00000180098|chr1:28571305-28571305|C/-|frameshift_variant	139.97047562133406	0.010493916756945389	4				NaN	NaN	0	NaN	1521	2327	3849
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3851	14.66	NaN	14710	30	0	3654	0.106			+	46638	VGCFPLRLI	9	53	339.86891050508984	1016.5849021154695	3	339.8694152832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VGCFPLRLI_	REV__ENSG00000277932|ENST00000610445|OR52E5	26.79610172149135	0.5528238334041078	4				NaN	NaN	0	NaN	1522	2327	3849
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3852	14.662	NaN	19762	30	0	3521.5	0.106	+			23134	KVVVSPTKK	9	71	493.32328956129055	984.6320261893811	2	493.3235168457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KVVVSPTKK_	ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232323706-232327997:-|nuORF	146.78539889680295	0.007618400906539062	4				NaN	NaN	0	NaN	1523	2327	3849
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3853	14.664	NaN	8160.9	30	0	1164	0.106	+			20041	KEKAKETAL	9	63	509.29978257318976	1016.5850122131795	2	509.3003234863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEKAKETAL_	ENSG00000169230|ENST00000303204|PRELID1;ENST00000503853.1_1_5:176733373-176733568:+|nuORF;ENST00000567272.1_1_6:126965256-126965442:+|nuORF;nc|ENSG00000169230|Q9Y255-2|PRELID1	83.6470233535746	0.08277643980271215	4				NaN	NaN	0	NaN	1524	2327	3849
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3854	14.666	NaN	42508	30	0	4027.5	0.106	+			44704	TTKKPPLAQK	10	102	371.2325082035359	1110.6756952108076	3	371.2325744628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TTKKPPLAQK_	ENSG00000130787|ENST00000253083|HIP1R;ENST00000538236.1_1_12:123345767-123346160:+|nuORF	96.0336014099291	0.09653029772959643	4				NaN	NaN	0	NaN	1525	2327	3849
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3855	14.668	NaN	6396.9	30	0	1825.9	0.106				-1	SGLLPCTPR	9	50	334.17892711573984	999.5149519474196	3	334.1795654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_SGLLPC(Carbamidomethyl (C))TPR_	ENST00000522491.1_1_5:149900453-149900525:+|nuORF	31.529811441608018	0.5085848003137583	4				NaN	NaN	0	NaN	1526	2327	3849
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3856	14.669	NaN	37816	30	0	5867.9	0.036	+			44705	TTKKPPLAQK	10	95	556.3447917812824	1110.6750306293648	2	556.3455200195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TTKKPPLAQK_	ENSG00000130787|ENST00000253083|HIP1R;ENST00000538236.1_1_12:123345767-123346160:+|nuORF	146.78539889680295	0.009066311176022962	4				NaN	NaN	0	NaN	1527	2327	3849
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3874	14.707	NaN	39404	30	0	7728.5	0.214	+			21420	KMTVMEAVD	9	81	512.2457641772777	1022.4769754213554	2	512.2463989257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KMTVMEAVD_	ENSG00000100253|ENST00000216075|MIOX;nc|ENSG00000100253|Q9UGB7-2|MIOX	44.377184641726394	0.36891676396732553	4				NaN	NaN	0	NaN	1542	2330	3873
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3875	14.711	NaN	3395.9	30	0	696.93	0.106	+			44697	TTISAEKVKKK	11	47	411.59011823716787	1231.7485253117036	3	411.590576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTISAEKVKKK_	ENSG00000120800|ENST00000261637|UTP20;UTP20|p.A1865Sfs*12|1|0.08|ENSG00000120800|chr12:101356982-101356983|-/ATCCTTTAGTC|frameshift_variant	27.64392233501311	0.6998289966465058	4				NaN	NaN	0	NaN	1543	2330	3873
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3876	14.713	NaN	2972.8	30	0	464.29	0.106			+	22353	KTGTKNTY	8	56	456.742401140234	911.470249347268	2	456.7426452636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KTGTKNTY_	REV__ENST00000517831.5_1_8:86133134-86133284:+|nuORF	47.657333605630114	0.6087971902037268	4				NaN	NaN	0	NaN	1544	2330	3873
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3877	14.714	NaN	2552.7	30	0	295.35	0.106			+	-1	MLPPAPLGVEP	11	74	568.8070678710938	NaN	0	568.8070678710938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_M(Oxidation (M))LPPAPLGVEP_	REV__ENSG00000104044|ENST00000354638|OCA2;REV__nc|ENSG00000104044|Q04671-2|OCA2;REV__OCA2|p.F810Sfs*7|1|0.32|ENSG00000104044|chr15:27844962-27844962|A/-|frameshift_variant	42.396135135203025	0.3699325281549567	4				NaN	NaN	0	NaN	1545	2330	3873
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3878	14.716	NaN	9593.8	30	0	1448.1	0.106	+			10511	EVVERLLSV	9	65	348.5409570436684	1042.6010417312052	3	348.54119873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EVVERLLSV_	ENSG00000203485|ENST00000392634|INF2;INF2|p.G1056Afs*31|1|0.29|ENSG00000203485|chr14:104714323-104714323|C/-|frameshift_variant;INF2|p.G1212Dfs*19|1|0.9|ENSG00000203485|chr14:104714794-104714810|GGGGCCGGGCCTCAAAG/-|frameshift_variant;INF2|p.P438Lfs*120|1|1.0|ENSG00000203485|chr14:104707576-104707576|C/-|frameshift_variant;INF2|p.P472Qfs*86|1|0.43|ENSG00000203485|chr14:104707676-104707676|C/-|frameshift_variant;INF2|p.V530Wfs*28|3|0.32|ENSG00000203485|chr14:104707848-104707848|C/-|frameshift_variant;nc|ENSG00000203485|Q27J81-2|INF2	51.33545320467046	0.2872990594074956	4				NaN	NaN	0	NaN	1546	2330	3873
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3879	14.718	NaN	10518	30	0	1208	0.035	+			46329	VEKKKEPSV	9	85	522.3078032801685	1042.601053627137	2	522.3088989257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VEKKKEPSV_	ENSG00000167674|ENST00000616600|HDGFL2;nc|ENSG00000167674|Q7Z4V5-2|HDGFL2;nc|ENSG00000167674|Q7Z4V5-3|HDGFL2;nc|ENSG00000167674|Q7Z4V5-4|HDGFL2	85.86182877749512	0.07653218437724067	4				NaN	NaN	0	NaN	1547	2330	3873
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3880	14.719	NaN	20714	30	0	3620.6	0.145			+	37488	SLKRPRGRK	9	82	366.5724765141357	1096.6956001426072	3	366.57275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SLKRPRGRK_	REV__ELF3|p.L306Cfs*19|1|0.41|ENSG00000163435|chr1:202013938-202013938|C/-|frameshift_variant;REV__ENSG00000163435|ENST00000367284|ELF3;REV__nc|ENSG00000163435|P78545-2|ELF3	33.921630207806714	0.48623198279849766	4				NaN	NaN	0	NaN	1548	2330	3873
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3898	14.759	NaN	16016	30	0	2170.8	0.214	+			2824	ASAAGVQR	8	67	380.2088124996721	758.4030720661442	2	380.2090148925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASAAGVQR_	nc|ENSG00000105993|O75190-3|DNAJB6	120.62098272573253	0.23366758524054274	4				NaN	NaN	0	NaN	1563	2333	3897
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3899	14.763	NaN	6484.1	30	0	744.1	0.106	+			43018	TEKRSTVAC	9	73	497.7519206323059	993.4892883314118	2	497.7527160644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEKRSTVAC_	ENSG00000112799|ENST00000230568|LY86	40.77816245573522	0.41113185337114944	4				NaN	NaN	0	NaN	1564	2333	3897
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3900	14.765	NaN	3704.7	30	0	487.75	0.106	+			36748	SHETNTVLR	9	68	549.7812031773151	NaN	0	549.7810668945312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SHETNTVLR_	BPIFB4|p.T29M|1|0.09|ENSG00000186191|chr20:33081612-33081612|C/T|missense_variant;ENSG00000186191|ENST00000375483|BPIFB4	79.45101966838831	0.07326487554222888	4				NaN	NaN	0	NaN	1565	2333	3897
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3901	14.766	NaN	3578.8	30	0	384.18	0.106	+			30628	QASPAPSLR	9	63	463.7560729980469	NaN	0	463.7560729980469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QASPAPSLR_	ENSG00000142512|ENST00000339313|SIGLEC10;ENSG00000161640|ENST00000447370|SIGLEC11;ENST00000357375.4_1_19:51914355-51919928:-|nuORF;nc|ENSG00000142512|Q96LC7-3|SIGLEC10;nc|ENSG00000142512|Q96LC7-4|SIGLEC10;SIGLEC11|p.S508Afs*11|1|0.32|ENSG00000161640|chr19:49958413-49958413|G/-|frameshift_variant	52.936696900407355	0.1864545979552969	4				NaN	NaN	0	NaN	1566	2333	3897
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3902	14.768	NaN	4743.2	30	0	539.26	0.106				-1	EFHMHLRL	8	56	366.8556625251245	1097.5451581755735	3	366.8561096191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_EFHM(Oxidation (M))HLRL_	CON__ENSEMBL:ENSBTAP00000007350;CON__P01030	31.954861631926434	0.7126016770032289	4				NaN	NaN	0	NaN	1567	2333	3897
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3903	14.77	NaN	24505	30	0	5583.1	0.036			+	20329	KERDLSKKL	9	75	558.8397552550053	1115.6649575768106	2	558.8406372070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KERDLSKKL_	REV__ENSG00000249158|ENST00000398640|PCDHA11;REV__nc|ENSG00000249158|Q9Y5I1-2|PCDHA11	120.8684288430529	0.02067403653475984	4				NaN	NaN	0	NaN	1568	2333	3897
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3921	14.807	NaN	369660	30	0	61823	0.131	+			3657	ASYGVSKGK	9	89	448.74480219227684	895.4750514513537	2	448.7452087402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASYGVSKGK_	ENSG00000153187|ENST00000640218|HNRNPU;nc|ENSG00000153187|Q00839-2|HNRNPU	143.37361013837676	0.008897369944672323	4				NaN	NaN	0	NaN	1583	2336	3920
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3922	14.81	NaN	71660	30	0	30316	0.106			+	13083	GFPNCRVQ	8	62	460.72404159723663	919.4335302612733	2	460.7243347167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GFPNCRVQ_	REV__ENSG00000006016|ENST00000392386|CRLF1	33.51558372728122	0.7005509609380386	4				NaN	NaN	0	NaN	1584	2336	3920
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3923	14.812	NaN	15549	30	0	3034.1	0.106				-1	 	0	74	457.73192451944385	913.4492961056877	2	457.7322998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1585	2336	3920
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3924	14.814	NaN	25686	30	0	10462	0.106				-1	 	0	62	368.8642655967022	1103.5709673903066	3	368.8646240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1586	2336	3920
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3925	14.816	NaN	16524	30	0	3075.8	0.106			+	8923	EEVMDVESG	9	65	497.70537695178916	993.3962009703783	2	497.7057800292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EEVMDVESG_	REV__C5|p.W1228Gfs*21|1|0.25|ENSG00000106804|chr9:120976882-120976882|A/-|frameshift_variant;REV__CON__Q1A7A4;REV__ENSG00000106804|ENST00000223642|C5	18.324413293986947	0.6112419832031293	4				NaN	NaN	0	NaN	1587	2336	3920
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3926	14.818	NaN	11977	30	0	2102.6	0.106	+			48790	VTYTEHAKR	9	73	552.7937359080805	NaN	0	552.793701171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTYTEHAKR_	ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2	145.15565482312357	0.0012548246736834398	4				NaN	NaN	0	NaN	1588	2336	3920
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3927	14.819	NaN	5894.8	30	0	787.71	0.034				-1	 	0	71	452.77617108763747	903.537789242075	2	452.7764892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1589	2336	3920
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3945	14.856	NaN	33867	30	0	4718.4	0.215				-1	 	0	88	491.2824467431158	980.5503405530317	2	491.28271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1604	2339	3944
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3946	14.859	NaN	17895	30	0	4536.8	0.106	+			48528	VTNPKRIAK	9	75	513.8239865913703	1025.6334202495404	2	513.824462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTNPKRIAK_	ENSG00000074800|ENST00000234590|ENO1;ENST00000464920.1_1_1:8921421-8930582:-|nuORF;nc|ENSG00000074800|P06733-2|ENO1	128.60217544463768	0.015992218256422188	4				NaN	NaN	0	NaN	1605	2339	3944
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3947	14.861	NaN	22500	30	0	5011.3	0.106	+			38676	SSIRHMIRK	9	69	381.88505365522224	1142.6333315658667	3	381.88525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_SSIRHM(Oxidation (M))IRK_	ENSG00000108107|ENST00000344063|RPL28;nc|ENSG00000108107|P46779-2|RPL28;nc|ENSG00000108107|P46779-3|RPL28	58.22992032128504	0.22837015374068087	4				NaN	NaN	0	NaN	1606	2339	3944
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3948	14.863	NaN	17445	30	0	4723.3	0.106	+			26040	LSLIPRTRA	9	67	342.8849936015536	1025.6331514048609	3	342.8853454589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSLIPRTRA_	ENST00000359114.8_1_22:38087588-38087750:+|nuORF	51.19269402634007	0.2889735674168909	4				NaN	NaN	0	NaN	1607	2339	3944
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3949	14.865	NaN	22499	30	0	2512.4	0.106	+			38512	SSCGKFQTK	9	101	521.7519527829008	1041.4893526326016	2	521.7530517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_SSC(Carbamidomethyl (C))GKFQTK_	DDX24|p.A177Rfs*34|1|0.2|ENSG00000089737|chr14:94079221-94079221|G/-|frameshift_variant;DDX24|p.S507Ffs*17|1|0.26|ENSG00000089737|chr14:94060491-94060492|-/A|frameshift_variant;ENSG00000089737|ENST00000621632|DDX24;ENST00000555324.1_1_14:94545323-94547480:-|nuORF;ENST00000555762.1_1_14:94524146-94547480:-|nuORF;nc|ENSG00000089737|Q9GZR7-2|DDX24	117.81106730687013	0.02252488733980868	4				NaN	NaN	0	NaN	1608	2339	3944
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3950	14.867	NaN	19946	30	0	2149	0.106				-1	 	0	71	458.2840806335293	914.5536083338586	2	458.28436279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1609	2339	3944
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3951	14.869	NaN	5739.9	30	0	1232.3	0.034	+			21965	KSDLKTQK	8	66	474.2790312021183	946.5435094710366	2	474.2792053222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KSDLKTQK_	ENST00000415694.1_1_9:109932192-109932378:-|nuORF	82.24051045832904	0.30490469762271794	4				NaN	NaN	0	NaN	1610	2339	3944
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3968	14.904	NaN	21835	30	0	5487.4	0.214	+			38979	SSSALHVHK	9	80	483.26111371072886	964.5076744882577	2	483.2613830566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSSALHVHK_	ENSG00000173480|ENST00000312026|ZNF417;ENSG00000198466|ENST00000339656|ZNF587;nc|ENSG00000173480|Q8TAU3-2|ZNF417;nc|ENSG00000198466|Q96SQ5-2|ZNF587;ZNF417|p.R546Kfs*4|1|0.34|ENSG00000173480|chr19:57908641-57908642|-/T|frameshift_variant	131.61620852596164	0.014413238321579053	4				NaN	NaN	0	NaN	1624	2342	3967
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3969	14.907	NaN	57123	30	0	13673	0.106				-1	 	0	66	442.6903177256304	883.3660825180608	2	442.6905517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1625	2342	3967
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3970	14.909	NaN	286870	30	0	64692	0.106				-1	 	0	128	367.55678277554586	1099.6485189268376	3	367.5572204589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1626	2342	3967
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3971	14.911	NaN	183240	30	0	34510	0.106	+			22800	KVFGGTVHKK	10	107	550.8314949126301	1099.64843689206	2	550.8324584960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KVFGGTVHKK_	ENSG00000163655|ENST00000496455|GMPS;GMPS|p.S473Lfs*26|1|0.37|ENSG00000163655|chr3:155922281-155922281|T/-|frameshift_variant;nc|ENSG00000163655|P49915-2|GMPS	175.3250769318428	0.0019924018525480686	4				NaN	NaN	0	NaN	1627	2342	3967
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3972	14.913	NaN	10830	30	0	2654.7	0.106	+			38476	SSASVTSLLT	10	43	322.5097215220037	964.5073351662111	3	322.5102233886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSASVTSLLT_	ENSG00000181143|ENST00000397910|MUC16;MUC16|p.F10843Sfs*11|1|0.22|ENSG00000181143|chr19:8938427-8938427|A/-|frameshift_variant;MUC16|p.L8270Wfs*63|1|0.04|ENSG00000181143|chr19:8951962-8951963|-/ACCA|frameshift_variant;MUC16|p.N9430Tfs*13|1|0.14|ENSG00000181143|chr19:8948481-8948481|T/-|frameshift_variant;MUC16|p.S7713Lfs*5|1|0.45|ENSG00000181143|chr19:8953634-8953634|G/-|frameshift_variant;MUC16|p.T7968Nfs*2|1|0.41|ENSG00000181143|chr19:8952867-8952868|-/T|frameshift_variant;MUC16|p.T8791Qfs*38|1|0.31|ENSG00000181143|chr19:8950403-8950403|G/-|frameshift_variant	29.170058357718403	0.6416167986984785	4				NaN	NaN	0	NaN	1628	2342	3967
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3973	14.915	NaN	3516.2	30	0	1049.2	0.106	+			40024	STMTSGQAR	9	49	469.7209531608275	937.427353388455	2	469.7212219238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STMTSGQAR_	ENSG00000106609|ENST00000341567|TMEM248;nc|ENSG00000106609|Q9NWD8-2|TMEM248	80.45461616416974	0.09558281504443908	4				NaN	NaN	0	NaN	1629	2342	3967
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3974	14.917	NaN	7957	30	0	1874.6	0.034	+			40242	STSGGCNLK	9	64	462.21539232594614	922.4162317186923	2	462.2157897949219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_STSGGC(Carbamidomethyl (C))NLK_	ENSG00000196586|ENST00000369977|MYO6;nc|ENSG00000196586|Q9UM54-2|MYO6;nc|ENSG00000196586|Q9UM54-4|MYO6;nc|ENSG00000196586|Q9UM54-5|MYO6;nc|ENSG00000196586|Q9UM54-6|MYO6;nc|ENSG00000196586|Q9UM54|MYO6	118.74307786436346	0.02196067127630568	4				NaN	NaN	0	NaN	1630	2342	3967
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3992	14.953	NaN	69658	30	0	19143	0.214				-1	 	0	82	335.18483075991486	1002.5326628799446	3	335.185302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1645	2345	3991
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3993	14.957	NaN	3013.1	30	0	526.22	0.106	+			26231	LSSNCVRQI	9	64	510.2701362805445	1018.525719627889	2	510.2718200683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSSNCVRQI_	RPA1|p.C77R|1|0.13|ENSG00000132383|chr17:1844643-1844643|T/C|missense_variant	76.7741389293348	0.11149722112137898	4				NaN	NaN	0	NaN	1646	2345	3991
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3994	14.959	NaN	3381.7	30	0	649.66	0.106			+	25128	LLQRLSHQQ	9	63	561.8227143956656	1121.630875858131	2	561.8237915039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LLQRLSHQQ_	REV__ENSG00000101280|ENST00000381922|ANGPT4;REV__nc|ENSG00000101280|Q9Y264-2|ANGPT4	69.6276240434122	0.14239879520340665	4				NaN	NaN	0	NaN	1647	2345	3991
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3995	14.961	NaN	5372.7	30	0	1021.9	0.106	+			1297	AESRAEKNRL	10	67	587.319593065829	1172.624633198458	2	587.3203735351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AESRAEKNRL_	ENSG00000116260|ENST00000367602|QSOX1	49.46582953369473	0.46192220282894864	4				NaN	NaN	0	NaN	1648	2345	3991
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3996	14.963	NaN	9268.9	30	0	2937.6	0.106	+			38731	SSLKPIKNK	9	69	507.8181627441788	1013.6217725551576	2	507.8186340332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSLKPIKNK_	ENSG00000164190|ENST00000282516|NIPBL;ENST00000504430.5_1_5:36961623-36995905:+|nuORF;nc|ENSG00000164190|Q6KC79-2|NIPBL;nc|ENSG00000164190|Q6KC79-3|NIPBL;NIPBL|p.F1423Lfs*15|1|0.43|ENSG00000164190|chr5:37008032-37008032|T/-|frameshift_variant;NIPBL|p.I2776Lfs*3|1|0.17|ENSG00000164190|chr5:37064797-37064797|A/-|frameshift_variant;NIPBL|p.L2220Ffs*3|1|0.21|ENSG00000164190|chr5:37048567-37048568|-/T|frameshift_variant	114.8945686534367	0.024290463251177924	4				NaN	NaN	0	NaN	1649	2345	3991
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3997	14.964	NaN	6399.4	30	0	2765.5	0.036	+			48529	VTNPKRIAK	9	59	342.8849936015536	1025.6331514048609	3	342.8865661621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTNPKRIAK_	ENSG00000074800|ENST00000234590|ENO1;ENST00000464920.1_1_1:8921421-8930582:-|nuORF;nc|ENSG00000074800|P06733-2|ENO1	51.19269402634007	0.2889735674168909	4				NaN	NaN	0	NaN	1650	2345	3991
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3998	14.965	NaN	16429	30	0	3216.3	0.14	+			5614	AVCKAGAVEK	10	69	516.7791675425578	NaN	0	516.779296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_AVC(Carbamidomethyl (C))KAGAVEK_	ENO1|p.D318Mfs*5|1|0.43|ENSG00000074800|chr1:8864006-8864006|C/-|frameshift_variant;ENSG00000074800|ENST00000234590|ENO1;ENST00000464920.1_1_1:8921421-8930582:-|nuORF;nc|ENSG00000074800|P06733-2|ENO1	93.5975768576971	0.04026034934357614	4				NaN	NaN	0	NaN	1651	2345	3991
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4016	15.004	NaN	3756.8	30	0	791.66	0.214	+			33086	REKRTTVVA	9	68	530.3166073751399	1058.6186618170798	2	530.3174438476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_REKRTTVVA_	ENSG00000104408|ENST00000220849|EIF3E;ENST00000518442.5_1_8:109247181-109261015:-|nuORF	39.252832667884924	0.4290233611298554	4				NaN	NaN	0	NaN	1666	2348	4015
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4017	15.008	NaN	35793	30	0	10174	0.106				-1	STLSDTKNMEI	11	74	418.86739248053334	1253.5803480418	3	418.867919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_STLSDTKNM(Oxidation (M))EI_	ENSG00000129873|ENST00000382867|CDY2B;ENSG00000182415|ENST00000250838|CDY2A	35.17822180527639	0.6208003396870814	4				NaN	NaN	0	NaN	1667	2348	4015
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4018	15.01	NaN	9802.2	30	0	2596.6	0.106	+			2293	AMANRAAGK	9	66	445.23749510443554	888.4604372756711	2	445.23480224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AMANRAAGK_	ENSG00000003987|ENST00000180173|MTMR7;ENSG00000102043|ENST00000374852|MTMR8;ENSG00000139505|ENST00000381801|MTMR6;ENST00000461403.1_1_X:63557232-63569902:-|nuORF;nc|ENSG00000003987|Q9Y216-2|MTMR7;nc|ENSG00000139505|Q9Y217-2|MTMR6	47.91560031466742	0.327412564698279	4				NaN	NaN	0	NaN	1668	2348	4015
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4019	15.012	NaN	11534	30	0	1841.6	0.106	+			18780	ITQGKDAAVSK	11	81	559.3144205137944	NaN	0	559.3143920898438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ITQGKDAAVSK_	ENSG00000140464|ENST00000268058|PML;ENST00000564725.1_1_15:74290377-74317280:+|nuORF;nc|ENSG00000140464|P29590-10|PML;nc|ENSG00000140464|P29590-11|PML;nc|ENSG00000140464|P29590-12|PML;nc|ENSG00000140464|P29590-13|PML;nc|ENSG00000140464|P29590-14|PML;nc|ENSG00000140464|P29590-2|PML;nc|ENSG00000140464|P29590-3|PML;nc|ENSG00000140464|P29590-4|PML;nc|ENSG00000140464|P29590-5|PML;nc|ENSG00000140464|P29590-8|PML;nc|ENSG00000140464|P29590-9|PML	139.3066351666995	4.638535287531934E-05	4				NaN	NaN	0	NaN	1669	2348	4015
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4020	15.014	NaN	4715.6	30	0	813.75	0.106				-1	 	0	48	323.8777087083813	968.6112967253439	3	323.8783264160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1670	2348	4015
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4021	15.015	NaN	3125.4	30	0	876.87	0.033			+	3706	ATAALNLGQ	9	59	429.7369260694809	857.4592992057618	2	429.7194519042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATAALNLGQ_	REV__ENSG00000165476|ENST00000373758|REEP3;REV__nc|ENSG00000165476|Q6NUK4-2|REEP3	56.72105179125745	0.24094814563026265	4				NaN	NaN	0	NaN	1671	2348	4015
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4022	15.016	NaN	1969.3	30	0	186.3	0.142			+	12972	GETKIEPVEL	10	45	372.20572512256354	1113.5953459678906	3	372.2060241699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GETKIEPVEL_	REV__ENSG00000147488|ENST00000689386|ST18;REV__ST18|p.E810Kfs*5|1|0.31|ENSG00000147488|chr8:52133074-52133074|T/-|frameshift_variant;REV__ST18|p.F884Lfs*27|1|0.33|ENSG00000147488|chr8:52131972-52131972|A/-|frameshift_variant;REV__ST18|p.L941Hfs*8|1|0.04|ENSG00000147488|chr8:52118375-52118376|-/AACTTGTGTGAAAATATAT|frameshift_variant;REV__ST18|p.N621Ifs*10|2|0.23|ENSG00000147488|chr8:52149922-52149922|T/-|frameshift_variant	42.396135135203025	0.5270658956260207	4				NaN	NaN	0	NaN	1672	2348	4015
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4040	15.055	NaN	24215	30	0	2633.9	0.215	+			4037	ATDDSKAVCR	10	98	533.2525286007376	1064.4905042682751	2	533.2536010742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATDDSKAVCR_	ENSG00000115758|ENST00000234111|ODC1	109.82975700811294	0.04850514657194457	4				NaN	NaN	0	NaN	1687	2351	4039
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4041	15.059	NaN	15239	30	0	3677.1	0.106			+	-1	QPEMHSAYQ	9	85	553.7330167975862	1105.4514806619723	2	553.7342529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_QPEM(Oxidation (M))HSAYQ_	REV__ENSG00000136710|ENST00000259229|CCDC115;REV__ENST00000465315.1_1_2:131099412-131099547:-|nuORF;REV__nc|ENSG00000136710|Q96NT0-2|CCDC115	51.33545320467046	0.2872990594074956	4				NaN	NaN	0	NaN	1688	2351	4039
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4042	15.061	NaN	12867	30	0	1817.3	0.106	+			34023	RSLASARPG	9	81	457.761373220799	913.508193508398	2	457.7617492675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RSLASARPG_	ENST00000251879.10_1_9:5629124-5629262:+|nuORF	110.11987700582712	0.028875675806141952	4				NaN	NaN	0	NaN	1689	2351	4039
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4043	15.063	NaN	23607	30	0	10805	0.106	+			39378	STDKQTCLK	9	65	341.8417562997314	1022.5034394993943	3	341.8427429199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STDKQTCLK_	ENSG00000198788|ENST00000675028|MUC2;nc|ENSG00000198788|Q02817|MUC2	49.536043120802724	0.308405419312776	4				NaN	NaN	0	NaN	1690	2351	4039
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4044	15.065	NaN	10444	30	0	1807.2	0.106	+			27859	MTGSSAPCK	9	69	469.706215868271	937.397878803342	2	469.7067565917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_MTGSSAPC(Carbamidomethyl (C))K_	ENST00000392001.6_1_2:238499129-238499162:-|nuORF	104.0567914643314	0.03506238181059741	4				NaN	NaN	0	NaN	1691	2351	4039
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4045	15.066	NaN	72434	30	0	10245	0.036	+			19283	KAFQATQQK	9	108	525.2896147432936	1048.564676553387	2	525.2916870117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KAFQATQQK_	ENSG00000145391|ENST00000274031|SETD7	209.1949250693894	5.5435209957013866E-08	4				NaN	NaN	0	NaN	1692	2351	4039
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4046	15.067	NaN	5818.5	30	0	1630.8	0.14			+	20811	KIETENEE	8	67	496.23262387763174	990.4506948220635	2	496.2330017089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KIETENEE_	REV__ARID4B|p.N659Kfs*3|1|0.25|ENSG00000054267|chr1:235194161-235194162|-/T|frameshift_variant;REV__ARID4B|p.T939Rfs*2|2|0.22|ENSG00000054267|chr1:235182104-235182104|T/-|frameshift_variant;REV__ENSG00000054267|ENST00000264183|ARID4B;REV__ENST00000491632.5_1_1:235341091-235490234:-|nuORF;REV__nc|ENSG00000054267|Q4LE39-2|ARID4B;REV__nc|ENSG00000054267|Q4LE39-3|ARID4B;REV__nc|ENSG00000054267|Q4LE39-4|ARID4B	42.396135135203025	0.6414440140393314	4				NaN	NaN	0	NaN	1693	2351	4039
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4064	15.106	NaN	7236.5	30	0	374.62	0.214	+			43007	TEKQKESTL	9	75	532.2845041956923	1062.5544554581845	2	532.2854614257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEKQKESTL_	ENSG00000153046|ENST00000397588|CDYL;nc|ENSG00000153046|Q9Y232|CDYL	114.8945686534367	0.024290463251177924	4				NaN	NaN	0	NaN	1708	2354	4063
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4065	15.11	NaN	6816.8	30	0	1208.9	0.106	+			48511	VTNDKLTSK	9	69	503.2816029657952	1004.5486529983904	2	503.2821960449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTNDKLTSK_	ENSG00000135899|ENST00000258381|SP110;ENST00000486146.2_1_2:231068050-231077551:-|nuORF;nc|ENSG00000135899|Q9HB58-3|SP110;nc|ENSG00000135899|Q9HB58-5|SP110;nc|ENSG00000135899|Q9HB58-7|SP110;nc|ENSG00000135899|Q9HB58|SP110	114.85826248499774	0.024312442104607014	4				NaN	NaN	0	NaN	1709	2354	4063
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4066	15.112	NaN	16430	30	0	6308.6	0.106			+	3707	ATAALNLGQ	9	68	429.7369260694809	857.4592992057618	2	429.7373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATAALNLGQ_	REV__ENSG00000165476|ENST00000373758|REEP3;REV__nc|ENSG00000165476|Q6NUK4-2|REEP3	108.08749611321984	0.03094949498378333	4				NaN	NaN	0	NaN	1710	2354	4063
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4067	15.114	NaN	3214.2	30	0	594.51	0.106			+	-1	KLTIRWLM	8	64	538.8183996949741	1075.6222464567481	2	538.8193969726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_KLTIRWLM(Oxidation (M))_	REV__ENST00000367874.4_1_1:166829552-166831501:-|nuORF	35.200714571348534	0.6875396545722289	4				NaN	NaN	0	NaN	1711	2354	4063
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4068	15.116	NaN	15230	30	0	7720	0.106	+			5460	ATYVQPRRK	9	70	559.8242812276395	1117.634009522079	2	559.8253173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATYVQPRRK_	CPSF2|p.I552Sfs*5|1|0.38|ENSG00000165934|chr14:92157711-92157711|A/-|frameshift_variant;ENSG00000165934|ENST00000298875|CPSF2	56.43379154798735	0.2433427591689151	4				NaN	NaN	0	NaN	1712	2354	4063
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4069	15.117	NaN	14425	30	0	5537.3	0.037	+			4947	ATQRQIVFR	9	43	373.55209435870194	1117.6344536763058	3	373.5522766113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATQRQIVFR_	sp|P09717|US16_HCMVAUncharacterizedproteinHVLF2OS=Humancytomegalovirus(strainAD169)OX=10360GN=US16PE=3SV=2;sp|Q6SVZ0|US16_HCMVMProteinUS16OS=Humancytomegalovirus(strainMerlin)OX=295027GN=US16PE=3SV=1	25.57405402267927	0.5642445186134241	4				NaN	NaN	0	NaN	1713	2354	4063
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4070	15.118	NaN	8869.9	30	0	2214	0.139				-1	MVSTDLMS	8	59	471.201016524323	940.387480115446	2	471.2013244628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))MVSTDLM(Oxidation (M))S_	ENST00000548860.5_1_12:49218876-49221679:+|nuORF;ENST00000552480.1_1_12:49218912-49220219:+|nuORF	28.2542754592877	0.7411748056684583	4				NaN	NaN	0	NaN	1714	2354	4063
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4088	15.157	NaN	180680	30	0	29921	0.214	+			6340	AVTKYTSSK	9	126	492.77124856596714	983.5279441987343	2	492.7713928222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVTKYTSSK_	ENSG00000146047|ENST00000274764|H2BC1;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000196890|ENST00000693095|H2BC26;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000436555.1_1_1:228651916-228652012:-|nuORF;nc|ENSG00000203814|Q5QNW6-2|H2BC18;nc|ENSG00000285480|A0A2R8Y619|H2BK1	218.57678817001025	1.90064538600055E-08	4				NaN	NaN	0	NaN	1729	2357	4087
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4089	15.161	NaN	8434.6	30	0	1756.7	0.106			+	24729	LHPQPMPSAGL	11	76	574.3003735849861	1146.5861942367721	2	574.3016967773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LHPQPMPSAGL_	REV__LPCAT4|p.H491Tfs*75|1|0.14|ENSG00000176454|chr15:34359232-34359233|-/G|frameshift_variant	51.19269402634007	0.4047928213175833	4				NaN	NaN	0	NaN	1730	2357	4087
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4090	15.163	NaN	17116	30	0	4039.9	0.106	+			5660	AVDPSSGHPR	10	78	511.7534524125599	1021.4923518919198	2	511.7544250488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVDPSSGHPR_	ENSG00000164323|ENST00000458385|CFAP97	85.86182877749512	0.1547657473298402	4				NaN	NaN	0	NaN	1731	2357	4087
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4091	15.165	NaN	2548.8	30	0	375.43	0.106	+			32074	QSASSKQKK	9	54	496.28202498398815	NaN	0	496.281982421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QSASSKQKK_	ENSG00000011258|ENST00000586178|MBTD1;ENST00000586898.1_1_17:49269519-49270175:-|nuORF	42.86426827375447	0.2558691296974908	4				NaN	NaN	0	NaN	1732	2357	4087
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4092	15.167	NaN	5587.5	30	0	1323.6	0.106	+			44307	TSDTKVVQ	8	70	439.23463608833123	NaN	0	439.23468017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TSDTKVVQ_	POLQ|p.K1013T|1|0.06|ENSG00000051341|chr3:121489893-121489893|T/G|missense_variant	99.37495909608758	1.7418937515398478	4				NaN	NaN	0	NaN	1733	2357	4087
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4093	15.168	NaN	1908.4	30	0	715.53	0.035			+	-1	SICFIGRK	8	34	327.5157087474131	979.5252968424393	3	327.5163269042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_SIC(Carbamidomethyl (C))FIGRK_	REV__ENSG00000127249|ENST00000342695|ATP13A4;REV__nc|ENSG00000127249|Q4VNC1-2|ATP13A4;REV__nc|ENSG00000127249|Q4VNC1-3|ATP13A4	37.15910966729921	0.6739408393984688	4				NaN	NaN	0	NaN	1734	2357	4087
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4094	15.169	NaN	7384.2	30	0	3332.1	0.138			+	-1	TTIAGMCV	8	47	426.70097678456625	851.3874006359325	2	426.701416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_TTIAGMC(Carbamidomethyl (C))V_	REV__MARVELD2|p.A205Pfs*58|1|0.3|ENSG00000152939|chr5:69419994-69419994|G/-|frameshift_variant	39.021493756699265	0.6623843612266921	4				NaN	NaN	0	NaN	1735	2357	4087
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4111	15.206	NaN	21455	30	0	8257.2	0.214			+	18856	IVDRGKHK	8	66	476.78761082873507	951.5606687242702	2	476.78753662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IVDRGKHK_	REV__ENSG00000149294|ENST00000316851|NCAM1;REV__nc|ENSG00000149294|P13591-1|NCAM1;REV__nc|ENSG00000149294|P13591-3|NCAM1;REV__nc|ENSG00000149294|P13591-4|NCAM1;REV__nc|ENSG00000149294|P13591-5|NCAM1;REV__nc|ENSG00000149294|P13591-6|NCAM1;REV__NCAM1|p.A767Pfs*49|1|0.19|ENSG00000149294|chr11:113270352-113270352|G/-|frameshift_variant	53.351449002276354	0.5676011784961348	4				NaN	NaN	0	NaN	1749	2360	4110
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4112	15.209	NaN	12438	30	0	2158.4	0.106				-1	 	0	70	500.81041541368256	999.6062778941651	2	500.8108825683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1750	2360	4110
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4113	15.211	NaN	5046.8	30	0	733.38	0.106	+			43120	TEREQKNSL	9	74	552.7851247733939	1103.5556966135878	2	552.7860717773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TEREQKNSL_	BICD2|p.R258C|1|0.42|ENSG00000185963|chr9:92720590-92720590|G/A|missense_variant;ENSG00000185963|ENST00000356884|BICD2;nc|ENSG00000185963|Q8TD16|BICD2	104.42354056486148	0.0346881550498418	4				NaN	NaN	0	NaN	1751	2360	4110
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4114	15.213	NaN	9015.6	30	0	1608.3	0.106	+			44546	TTADFRTKK	9	47	356.5324983289027	1066.5756655869081	3	356.5328674316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TTADFRTKK_	ENSG00000011243|ENST00000397410|AKAP8L;ENST00000593845.5_1_19:15510111-15529746:-|nuORF;ENST00000594893.5_1_19:15511079-15529746:-|nuORF;ENST00000598292.1_1_19:15511553-15512083:-|nuORF;nc|ENSG00000011243|Q9ULX6-2|AKAP8L	40.77816245573522	0.41113185337114944	4				NaN	NaN	0	NaN	1752	2360	4110
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4115	15.215	NaN	5198.9	30	0	934.8	0.106				-1	 	0	74	589.3190378001539	1176.6235226671076	2	589.3199462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1753	2360	4110
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4116	15.217	NaN	4193.2	30	0	405.25	0.038	+			50120	WHQAPWGEFS	10	71	622.7780684451544	1243.5415839571087	2	622.7786865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_WHQAPWGEFS_	ENST00000376861.5_1_6:29690684-29691103:+|nuORF	51.33545320467046	0.4446945571623749	4				NaN	NaN	0	NaN	1754	2360	4110
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4117	15.217	NaN	6591.5	30	0	982.34	0.142	+			9776	ENPLWTCL	8	69	516.7450664366036	1031.475579940007	2	516.7457885742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_ENPLWTC(Carbamidomethyl (C))L_	nc|ENSG00000155307|Q9NSI8-3|SAMSN1	65.80317337860623	0.44433089765398776	4				NaN	NaN	0	NaN	1755	2360	4110
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4133	15.253	NaN	12040	30	0	1466.9	0.214	+			21509	KNMRTTPK	8	81	496.27049044879277	990.5264279643856	2	496.2710876464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_KNM(Oxidation (M))RTTPK_	ENSG00000164743|ENST00000297324|C8orf48	118.74307786436346	0.2363524257139583	4				NaN	NaN	0	NaN	1768	2363	4132
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4134	15.256	NaN	7458.7	30	0	2132.7	0.106	+			26618	LVADVVQDVL	10	48	357.54161972434724	NaN	0	357.5416259765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LVADVVQDVL_	ENSG00000101407|ENST00000373447|TTI1;TTI1|p.L924Wfs*37|2|0.15|ENSG00000101407|chr20:37999211-37999211|G/-|frameshift_variant	37.81151784470057	0.3760215235790741	4				NaN	NaN	0	NaN	1769	2363	4132
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4135	15.258	NaN	4695.3	30	0	1861	0.106	+			25049	LLKFTPGAVML	11	63	595.3535652947603	1188.6925776563205	2	595.3543701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LLKFTPGAVML_	ENSG00000123200|ENST00000679008|ZC3H13;nc|ENSG00000123200|Q5T200-2|ZC3H13;nc|ENSG00000123200|Q5T200|ZC3H13	29.550750289552195	0.6798279264880025	4				NaN	NaN	0	NaN	1770	2363	4132
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4136	15.26	NaN	2228.3	30	0	285.48	0.106	+			33291	RGNILNLN	8	70	457.26383289583646	912.5131128584729	2	458.2480773925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RGNILNLN_	ENSG00000086205|ENST00000256999|FOLH1;ENST00000526226.1_1_11:49207215-49208312:-|nuORF;ENST00000529567.5_1_11:89372457-89431764:+|nuORF;FOLH1|p.K499Ifs*16|1|0.06|ENSG00000086205|chr11:49157988-49157989|-/GAAAA|frameshift_variant;FOLH1|p.S338Yfs*13|1|0.37|ENSG00000086205|chr11:49175866-49175867|AA/-|frameshift_variant;FOLH1|p.S501Kfs*20|1|0.27|ENSG00000086205|chr11:49157982-49157983|-/T|frameshift_variant;FOLH1|p.S501Vfs*12|1|0.15|ENSG00000086205|chr11:49157983-49157983|T/-|frameshift_variant;nc|ENSG00000086205|Q04609-3|FOLH1;nc|ENSG00000086205|Q04609-6|FOLH1;nc|ENSG00000086205|Q04609-7|FOLH1;nc|ENSG00000086205|Q04609-8|FOLH1;nc|ENSG00000086205|Q04609-9|FOLH1	33.51558372728122	0.7005509609380386	4				NaN	NaN	0	NaN	1771	2363	4132
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4137	15.262	NaN	6203.6	30	0	1293.4	0.106	+			21966	KSDLKTQK	8	72	474.2790312021183	946.5435094710366	2	474.2791748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KSDLKTQK_	ENST00000415694.1_1_9:109932192-109932378:-|nuORF	71.87747018426188	0.391254423828572	4				NaN	NaN	0	NaN	1772	2363	4132
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4138	15.264	NaN	7955.5	30	0	1384.3	0.036			+	30715	QDGPEKKKR	9	70	543.305948757457	1084.597344581714	2	543.3070068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QDGPEKKKR_	REV__CHD6|p.I2312Sfs*13|1|0.15|ENSG00000124177|chr20:41415191-41415191|T/-|frameshift_variant;REV__CHD6|p.N481Tfs*10|1|0.23|ENSG00000124177|chr20:41490016-41490016|T/-|frameshift_variant;REV__ENSG00000124177|ENST00000373233|CHD6;REV__nc|ENSG00000124177|Q8TD26-2|CHD6;REV__nc|ENSG00000124177|Q8TD26-3|CHD6	75.04331003522576	0.118981335847003	4				NaN	NaN	0	NaN	1773	2363	4132
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4139	15.264	NaN	3845.5	30	0	996.27	0.141			+	35667	SDCKMSVADL	10	63	534.7379426581534	1067.4613323831068	2	534.73876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SDCKMSVADL_	REV__ENSG00000127603|ENST00000564288|MACF1;REV__ENST00000476350.1_1_1:39768622-39838291:+|nuORF;REV__MACF1|p.A5223Lfs*8|1|0.21|ENSG00000127603|chr1:39388486-39388486|G/-|frameshift_variant;REV__MACF1|p.N4824Kfs*19|1|0.33|ENSG00000127603|chr1:39387292-39387293|-/A|frameshift_variant;REV__MACF1|p.S2157Ffs*3|1|0.37|ENSG00000127603|chr1:39333036-39333037|-/T|frameshift_variant;REV__MACF1|p.T4896Lfs*29|1|0.27|ENSG00000127603|chr1:39387507-39387507|A/-|frameshift_variant;REV__nc|ENSG00000127603|Q9UPN3-2|MACF1;REV__nc|ENSG00000127603|Q9UPN3-3|MACF1;REV__nc|ENSG00000127603|Q9UPN3-4|MACF1;REV__nc|ENSG00000127603|Q9UPN3|MACF1	45.02220120713402	0.5028680121232791	4				NaN	NaN	0	NaN	1774	2363	4132
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4155	15.299	NaN	14116	30	0	3892.9	0.214				-1	 	0	60	433.2160748641707	864.4175967951414	2	433.2164611816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1787	2366	4154
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4156	15.303	NaN	26679	30	0	3890.5	0.106	+			42959	TEKAKEERL	9	86	552.3058716481946	1102.5971903631892	2	552.3067626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEKAKEERL_	ENSG00000149503|ENST00000394818|INCENP;INCENP|p.E620D|1|0.06|ENSG00000149503|chr11:62145652-62145652|G/T|missense_variant;nc|ENSG00000149503|Q9NQS7-2|INCENP	155.5846463517096	0.005567437401040498	4				NaN	NaN	0	NaN	1788	2366	4154
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4157	15.305	NaN	6283.5	30	0	857.14	0.106				-1	 	0	63	491.2824467431158	980.5503405530317	2	491.2828674316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1789	2366	4154
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4158	15.307	NaN	3178	30	0	565.06	0.106	+			19731	KDTSPKQRI	9	69	536.8096879599343	NaN	0	536.8096313476562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KDTSPKQRI_	ENSG00000102385|ENST00000395209|DRP2;nc|ENSG00000102385|Q13474-2|DRP2	58.22992032128504	0.15686832049467786	4				NaN	NaN	0	NaN	1790	2366	4154
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4159	15.309	NaN	34021	30	0	4983.1	0.106			+	44692	TTILESAGGRV	11	97	368.53956884448786	1102.5968771336636	3	368.53997802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TTILESAGGRV_	REV__C8B|p.H434L|1|0.07|ENSG00000021852|chr1:56940946-56940946|T/A|missense_variant	28.081489160057373	0.6952392775027776	4				NaN	NaN	0	NaN	1791	2366	4154
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4160	15.31	NaN	3485.8	30	0	824.85	0.106				-1	 	0	37	326.16344935856813	650.3123457839363	2	326.16400146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1792	2366	4154
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4161	15.312	NaN	3972.8	30	0	618.12	0.038	+			34451	RTYDGDGYKK	10	59	601.793159814637	1201.5717666960738	2	601.7935180664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RTYDGDGYKK_	ENSG00000272325|ENST00000607016|NUDT3;NUDT3|p.T76Hfs*5|1|0.07|ENSG00000272325|chr6:34295674-34295674|T/-|frameshift_variant	70.8162118820467	0.27065172005956	4				NaN	NaN	0	NaN	1793	2366	4154
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4179	15.35	NaN	56891	30	0	15473	0.193				-1	 	0	89	507.80007150534925	1013.5855900774985	2	507.8006591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1808	2369	4178
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4180	15.353	NaN	42463	30	0	13860	0.106				-1	 	0	83	338.86904303459124	1013.5852997039738	3	338.86956787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1809	2369	4178
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4181	15.355	NaN	20020	30	0	5348.4	0.106	+			50755	YEKKAAKL	8	69	475.7868023053858	949.5590516775716	2	475.7868957519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YEKKAAKL_	ENSG00000189403|ENST00000341423|HMGB1;nc|ENSG00000067066|P23497|SP100	87.69643885390035	0.28444366722805053	4				NaN	NaN	0	NaN	1810	2369	4178
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4182	15.357	NaN	49958	30	0	9120.6	0.106				-1	 	0	77	458.2239091611933	914.4332653891867	2	458.2243957519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1811	2369	4178
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4183	15.359	NaN	5442.1	30	0	895.47	0.106	+			48208	VTAPGGHPR	9	58	446.24276141340425	890.4709698936085	2	446.24310302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTAPGGHPR_	ENSG00000204469|ENST00000376033|PRRC2A;nc|ENSG00000204469|P48634-2|PRRC2A;nc|ENSG00000204469|P48634-3|PRRC2A;nc|ENSG00000204469|P48634-4|PRRC2A;PRRC2A|p.A1596Gfs*24|1|0.1|ENSG00000204469|chr6:31634300-31634301|-/G|frameshift_variant;PRRC2A|p.G1731Wfs*35|1|0.59|ENSG00000204469|chr6:31635155-31635156|-/C|frameshift_variant;PRRC2A|p.G1884Afs*12|1|0.18|ENSG00000204469|chr6:31636228-31636228|C/-|frameshift_variant;PRRC2A|p.K1685Rfs*9|1|0.21|ENSG00000204469|chr6:31634864-31634864|C/-|frameshift_variant	64.20726635412375	0.17854274437659667	4				NaN	NaN	0	NaN	1812	2369	4178
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4184	15.36	NaN	48289	30	0	4833.3	0.106	+			2665	AQNAKVIEK	9	88	500.79309287226897	NaN	0	500.79296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AQNAKVIEK_	ENSG00000018610|ENST00000644802|STEEP1;ENST00000469448.1_1_X:118673692-118676584:-|nuORF;nc|ENSG00000018610|Q9H5V9-2|STEEP1;nc|ENSG00000018610|Q9H5V9-3|STEEP1	155.5846463517096	0.006928971805488876	4				NaN	NaN	0	NaN	1813	2369	4178
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4185	15.362	NaN	13300	30	0	4835.4	0.037				-1	 	0	49	362.53968997256544	1084.5972405178964	3	362.5401306152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1814	2369	4178
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4201	15.395	NaN	59559	30	0	3481.9	0.161	+			30457	QAAKDLVTR	9	95	501.2905096930047	1000.5664664528094	2	501.79559326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QAAKDLVTR_	ENSG00000164076|ENST00000477224|CAMKV;ENST00000475665.5_1_3:49896753-49898557:-|nuORF;nc|ENSG00000164076|Q8NCB2-2|CAMKV;nc|ENSG00000164076|Q8NCB2-3|CAMKV	88.17693792209575	0.07000514020414955	4				NaN	NaN	0	NaN	1827	2372	4200
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4202	15.397	NaN	26020	30	0	9904.2	0.106			+	39766	STIVPTTDTR	10	50	364.1956863812971	1089.5652297440913	3	364.19610595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STIVPTTDTR_	REV__ENSG00000163867|ENST00000357182|ZMYM6;REV__ENST00000493328.5_1_1:35455862-35480681:-|nuORF;REV__nc|ENSG00000163867|O95789-1|ZMYM6;REV__ZMYM6|p.F804Lfs*6|1|0.38|ENSG00000163867|chr1:34988670-34988670|A/-|frameshift_variant;REV__ZMYM6|p.I637Yfs*14|1|0.36|ENSG00000163867|chr1:35005177-35005177|T/-|frameshift_variant;REV__ZMYM6|p.L686Ifs*41|1|0.03|ENSG00000163867|chr1:34992324-34992325|-/GAAAGGAAAAGAAAAT|frameshift_variant;REV__ZMYM6|p.N1298Ifs*9|1|0.15|ENSG00000163867|chr1:34987189-34987189|T/-|frameshift_variant;REV__ZMYM6|p.N724Mfs*15|1|0.42|ENSG00000163867|chr1:34988911-34988911|T/-|frameshift_variant	26.69291269510374	0.6618461711292317	4				NaN	NaN	0	NaN	1828	2372	4200
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4203	15.399	NaN	33024	30	0	3991.9	0.106			+	30683	QCIGGRLFTK	10	87	561.808535596606	1121.602518260012	2	561.8095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QCIGGRLFTK_	REV__ENST00000414876.5_1_2:231850605-231851715:-|nuORF	71.87747018426188	0.26198133118427214	4				NaN	NaN	0	NaN	1829	2372	4200
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4204	15.401	NaN	6385.6	30	0	1060.9	0.106	+			19616	KDGSFITLR	9	71	518.7930564729186	1035.571560012637	2	518.7930908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KDGSFITLR_	ENSG00000133794|ENST00000403290|BMAL1;nc|ENSG00000133794|O00327-1|BMAL1;nc|ENSG00000133794|O00327-4|BMAL1;nc|ENSG00000133794|O00327-6|BMAL1;nc|ENSG00000133794|O00327-7|BMAL1;nc|ENSG00000133794|O00327-8|BMAL1;nc|ENSG00000133794|O00327-9|BMAL1	61.691277971877994	0.19951612995419254	4				NaN	NaN	0	NaN	1830	2372	4200
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4205	15.403	NaN	4103.3	30	0	1304.5	0.106				-1	 	0	49	346.19736230461996	345.19008583801997	1	346.19757080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1831	2372	4200
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4206	15.405	NaN	7318.4	30	0	924	0.106			+	26724	LVLHCKECK	9	74	358.19212183136847	1071.5545360943054	3	358.1925354003906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LVLHCKECK_	REV__ENSG00000131323|ENST00000392745|TRAF3;REV__nc|ENSG00000131323|Q13114-2|TRAF3;REV__TRAF3|p.F475Lfs*20|1|0.28|ENSG00000131323|chr14:102905497-102905497|T/-|frameshift_variant;REV__TRAF3|p.N285Kfs*13|1|0.37|ENSG00000131323|chr14:102897288-102897289|-/A|frameshift_variant	40.5726180659479	0.4135428067754104	4				NaN	NaN	0	NaN	1832	2372	4200
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4207	15.406	NaN	3335.9	30	0	339.04	0.036	+			10302	ETQALKQKI	9	61	529.8141479492188	NaN	0	529.8141479492188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ETQALKQKI_	ENSG00000180096|ENST00000321367|SEPTIN1;ENST00000573615.5_1_16:30391180-30392483:-|nuORF	52.936696900407355	0.1864545979552969	4				NaN	NaN	0	NaN	1833	2372	4200
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4224	15.445	NaN	32358	30	0	8714.7	0.214	+			35366	SAPRHGSL	8	72	412.72235309116644	NaN	0	412.7222595214844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAPRHGSL_	ENSG00000100316|ENST00000216146|RPL3;ENST00000460589.5_1_22:39713464-39715412:-|nuORF;ENST00000465618.5_1_22:39712851-39715803:-|nuORF;ENST00000484615.5_1_22:39713464-39715605:-|nuORF	64.20726635412375	1.7418937515398478	4				NaN	NaN	0	NaN	1847	2375	4223
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4225	15.449	NaN	13596	30	0	2320.5	0.106	+			3391	ASQEGTIQK	9	72	481.25055652071444	960.4865601082289	2	481.2509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASQEGTIQK_	ENSG00000172349|ENST00000683961|IL16;nc|ENSG00000172349|Q14005-2|IL16;nc|ENSG00000172349|Q14005-3|IL16;nc|ENSG00000172349|Q14005-4|IL16	142.36107225718385	0.009372392051035914	4				NaN	NaN	0	NaN	1848	2375	4223
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4226	15.451	NaN	17945	30	0	9758.9	0.106	+			26992	LYNAWEDAQF	10	71	649.7882767416361	1297.562000550072	2	649.7896118164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LYNAWEDAQF_	ENST00000263967.3_1_3:178921342-178921384:+|nuORF	60.11826168202944	0.36476464221954025	4				NaN	NaN	0	NaN	1849	2375	4223
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4227	15.453	NaN	4246.7	30	0	850.88	0.106			+	570	ADHGAELG	8	58	385.17728378920293	768.3400146452059	2	385.1773376464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ADHGAELG_	REV__ENST00000400109.2_1_13:19879361-19879751:-|nuORF	52.29916861842294	0.578018602984656	4				NaN	NaN	0	NaN	1850	2375	4223
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4228	15.455	NaN	5341.3	30	0	1284.6	0.106	+			13038	GEVTIRNTK	9	67	509.28722154568857	1016.5598901581772	2	509.28814697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GEVTIRNTK_	ENSG00000079156|ENST00000190611|OSBPL6;nc|ENSG00000079156|Q9BZF3-2|OSBPL6;nc|ENSG00000079156|Q9BZF3-3|OSBPL6;nc|ENSG00000079156|Q9BZF3-4|OSBPL6;nc|ENSG00000079156|Q9BZF3-5|OSBPL6;OSBPL6|p.F898Lfs*31|1|0.36|ENSG00000079156|chr2:178394428-178394428|T/-|frameshift_variant	49.536043120802724	0.308405419312776	4				NaN	NaN	0	NaN	1851	2375	4223
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4229	15.456	NaN	16216	30	0	2761.2	0.036	+			44593	TTCSKVFKK	9	81	549.8022885568855	1097.590024180571	2	549.8026733398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_TTC(Carbamidomethyl (C))SKVFKK_	ENSG00000167625|ENST00000301215|ZNF526	141.52041321563706	0.009766778904176347	4				NaN	NaN	0	NaN	1852	2375	4223
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4247	15.495	NaN	62207	30	0	5947.1	0.164	+			22144	KSQQALVQK	9	91	515.3057481380455	1028.5969433428909	2	515.3065185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSQQALVQK_	ENSG00000116459|ENST00000369722|ATP5PB;ENST00000567372.1_1_18:65945123-65945423:-|nuORF	112.10723106719422	0.02684780151337622	4				NaN	NaN	0	NaN	1867	2378	4246
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4248	15.497	NaN	28110	30	0	15700	0.106			+	2405	APAPANINQK	10	73	512.2809891052983	1022.5474252773967	2	512.281982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_APAPANINQK_	REV__ENSG00000100249|ENST00000216071|C22orf31	49.44154591367651	0.46214596422418036	4				NaN	NaN	0	NaN	1868	2378	4246
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4249	15.499	NaN	27336	30	0	5018.2	0.106	+			14907	GTLTPARQK	9	85	486.28485715627824	970.5551613793565	2	486.2854309082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTLTPARQK_	ENSG00000100417|ENST00000216259|PMM1;ENST00000478337.1_1_22:41980122-41985809:-|nuORF;ENST00000485648.5_1_22:41980283-41985809:-|nuORF;PMM1|p.E103Sfs*6|1|0.05|ENSG00000100417|chr22:41584348-41584348|C/-|frameshift_variant	95.81516180277367	0.04847050768394289	4				NaN	NaN	0	NaN	1869	2378	4246
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4250	15.501	NaN	32801	30	0	5044	0.106				-1	QQSAHCLQQ	9	78	550.2506327451785	1098.4867125571568	2	550.2516479492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_QQSAHC(Carbamidomethyl (C))LQQ_	ENST00000556018.5_1_14:92280121-92302810:-|nuORF	49.44154591367651	0.3095138337212152	4				NaN	NaN	0	NaN	1870	2378	4246
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4251	15.503	NaN	5131.9	30	0	905.86	0.106	+			15559	GVFKETKQK	9	69	532.8083906069925	1063.6022282807849	2	532.8093872070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GVFKETKQK_	ENSG00000119927|ENST00000348367|GPAM	77.31757898189308	0.1091473830098891	4				NaN	NaN	0	NaN	1871	2378	4246
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4252	15.505	NaN	3872.6	30	0	476.95	0.106	+			38695	SSKKSTALSR	10	50	355.54102295450826	1063.6012394637248	3	355.54150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSKKSTALSR_	ENSG00000198554|ENST00000360586|WDHD1;nc|ENSG00000198554|O75717-2|WDHD1	19.996771675451527	0.7148376616046445	4				NaN	NaN	0	NaN	1872	2378	4246
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4253	15.507	NaN	3306.3	30	0	426.3	0.033			+	39095	SSSTRPAH	8	59	421.7090920277395	841.403631122279	2	421.70947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSSTRPAH_	REV__ENSG00000156599|ENST00000287169|ZDHHC5;REV__ENST00000529480.1_1_11:57457792-57467500:+|nuORF;REV__nc|ENSG00000156599|Q9C0B5-2|ZDHHC5	63.30626980617807	0.4690498839812213	4				NaN	NaN	0	NaN	1873	2378	4246
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4271	15.545	NaN	94044	30	0	50420	0.139	+			13420	GLGLCLPPGP	10	67	462.25509993805923	922.4956469429185	2	462.25537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GLGLCLPPGP_	ENST00000471717.1_1_7:99772169-99774834:-|nuORF	44.53106598305862	0.5073935772121767	4				NaN	NaN	0	NaN	1888	2381	4270
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4272	15.547	NaN	86785	30	0	12605	0.104				-1	 	0	100	470.7579589340252	939.5013649348505	2	470.7581787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1889	2381	4270
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4273	15.549	NaN	62284	30	0	40970	0.106				-1	 	0	61	413.2263071292638	824.4380613253276	2	413.2265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1890	2381	4270
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4274	15.551	NaN	11552	30	0	1235.6	0.106				-1	VLCILPVMK	9	89	358.2139795459107	1071.6201092379322	3	358.2146911621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_VLC(Carbamidomethyl (C))ILPVMK_	ENSG00000137492|ENST00000260045|THAP12	51.33545320467046	0.2872990594074956	4				NaN	NaN	0	NaN	1891	2381	4270
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4275	15.553	NaN	70648	30	0	13995	0.106	+			2922	ASCNQTLSK	9	93	504.74167346171527	1007.4687939902306	2	504.7420959472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_ASC(Carbamidomethyl (C))NQTLSK_	ENSG00000155256|ENST00000684270|ZFYVE27;ENST00000477521.5_1_10:99516996-99519054:+|nuORF;nc|ENSG00000155256|Q5T4F4-2|ZFYVE27;nc|ENSG00000155256|Q5T4F4-3|ZFYVE27;nc|ENSG00000155256|Q5T4F4-5|ZFYVE27;nc|ENSG00000155256|Q5T4F4-6|ZFYVE27;nc|ENSG00000155256|Q5T4F4-7|ZFYVE27;nc|ENSG00000155256|Q5T4F4-8|ZFYVE27	187.50397467658743	0.0005427347354732084	4				NaN	NaN	0	NaN	1892	2381	4270
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4276	15.554	NaN	4371.2	30	0	584.81	0.106	+			32239	QTGLVRRSR	9	74	536.8183844459643	1071.6222159587285	2	536.818603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QTGLVRRSR_	ENSG00000185950|ENST00000375856|IRS2	44.377184641726394	0.36891676396732553	4				NaN	NaN	0	NaN	1893	2381	4270
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4277	15.556	NaN	4692	30	0	1062.9	0.035	+			36120	SEKNNSNSL	9	68	496.7359379159406	NaN	0	496.7357177734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SEKNNSNSL_	ENSG00000163605|ENST00000356692|PPP4R2;ENST00000429866.1_1_3:195664216-195664672:+|nuORF;ENST00000504656.1_1_5:289217-290334:-|nuORF;nc|ENSG00000163605|Q9NY27-2|PPP4R2;nc|ENSG00000163605|Q9NY27-3|PPP4R2	109.47833844074708	0.010168233843482827	4				NaN	NaN	0	NaN	1894	2381	4270
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4295	15.594	NaN	11995	30	0	2856.2	0.197	+			5266	ATVDKTVCK	9	71	511.27040637725474	1020.5262598213095	2	511.2710266113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_ATVDKTVC(Carbamidomethyl (C))K_	ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1670Tfs*23|1|0.29|ENSG00000174231|chr17:1659487-1659487|C/-|frameshift_variant	167.22876102047192	0.0032399547248545047	4				NaN	NaN	0	NaN	1909	2384	4294
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4296	15.598	NaN	14398	30	0	3730.9	0.106	+			38587	SSFYNTKKK	9	68	551.7979058978202	1101.5812588624403	2	551.7986450195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSFYNTKKK_	ENSG00000169692|ENST00000371696|AGPAT2;ENST00000472820.1_1_9:139568206-139571631:-|nuORF;nc|ENSG00000169692|O15120-2|AGPAT2	158.07458414430337	0.004987072822166904	4				NaN	NaN	0	NaN	1910	2384	4294
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4297	15.6	NaN	12411	30	0	2793.2	0.106				-1	 	0	68	327.1839445107783	652.3533360883566	2	327.1844177246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1911	2384	4294
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4298	15.601	NaN	22021	30	0	5419.7	0.106	+			22741	KVCMLCSVGYH	11	88	656.7961394247494	1311.5777259162987	2	656.7976684570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_KVC(Carbamidomethyl (C))M(Oxidation (M))LCSVGYH_	ENST00000512760.5_1_4:79841695-79860421:-|nuORF	52.936696900407355	0.3865048210802777	4				NaN	NaN	0	NaN	1912	2384	4294
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4299	15.603	NaN	20545	30	0	3152.1	0.106			+	-1	GIYLDSTPTWC	11	76	438.20031714921186	1311.5791220478357	3	438.2005920410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_GIYLDSTPTWC(Carbamidomethyl (C))_	REV__CFAP43|p.D1520Ifs*15|1|0.35|ENSG00000197748|chr10:104133658-104133658|C/-|frameshift_variant;REV__CFAP43|p.S792Afs*19|1|0.25|ENSG00000197748|chr10:104179848-104179848|T/-|frameshift_variant;REV__CFAP43|p.V1381Wfs*7|1|0.2|ENSG00000197748|chr10:104143444-104143444|T/-|frameshift_variant;REV__ENSG00000197748|ENST00000357060|CFAP43;REV__nc|ENSG00000197748|Q8NDM7-2|CFAP43;REV__nc|ENSG00000197748|Q8NDM7-3|CFAP43;REV__nc|ENSG00000197748|Q8NDM7-4|CFAP43;REV__nc|ENSG00000197748|Q8NDM7-5|CFAP43	43.650786325866115	0.5079891456189096	4				NaN	NaN	0	NaN	1913	2384	4294
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4300	15.605	NaN	54607	30	0	8311.2	0.106				-1	 	0	82	525.8056814043373	1049.5968098754745	2	525.806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1914	2384	4294
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4301	15.607	NaN	5380.2	30	0	2687.1	0.038				-1	EKLCDRLEL	9	49	392.5408336686024	1174.6006716060072	3	392.20684814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_EKLC(Carbamidomethyl (C))DRLEL_	ENSG00000105821|ENST00000379263|DNAJC2;ENST00000475065.5_1_7:102953018-102963086:-|nuORF	29.170058357718403	0.5306379469863586	4				NaN	NaN	0	NaN	1915	2384	4294
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4319	15.645	NaN	98594	30	0	28403	0.214	+			41603	SVQHVDAAEK	10	91	361.85213548853227	1082.5345770657968	3	361.8523864746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVQHVDAAEK_	ENST00000585682.5_1_4:159092526-159092595:-|nuORF	99.78786539795823	0.07832680346773438	4				NaN	NaN	0	NaN	1930	2387	4318
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4320	15.649	NaN	60321	30	0	11966	0.106			+	-1	WKHDKLCP	8	94	542.2741444619612	1082.5337359907223	2	542.2752075195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_WKHDKLC(Carbamidomethyl (C))P_	REV__TTF1|p.K279Rfs*144|2|0.29|ENSG00000125482|chr9:132401986-132401986|T/-|frameshift_variant	60.97194046774394	0.49215940876911696	4				NaN	NaN	0	NaN	1931	2387	4318
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4321	15.651	NaN	20894	30	0	2571	0.106				-1	 	0	81	419.2320466957121	836.4495404582242	2	419.2322998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1932	2387	4318
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4322	15.652	NaN	8236.5	30	0	1450.8	0.106	+			6092	AVNKQLADK	9	75	493.7844936819841	985.5544344307682	2	493.7848815917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVNKQLADK_	ENSG00000166595|ENST00000422424|CIAO2B;ENST00000562362.5_1_16:66966108-66968009:-|nuORF	96.0336014099291	0.047854655524928534	4				NaN	NaN	0	NaN	1933	2387	4318
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4323	15.654	NaN	6076.9	30	0	709.45	0.106	+			14175	GSQAGGSQTLK	11	71	517.2666478787962	1032.5187428243923	2	517.267333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GSQAGGSQTLK_	ENSG00000125354|ENST00000394610|SEPTIN6;ENST00000467310.1_1_X:118753883-118767379:-|nuORF;ENST00000481072.1_1_X:118763279-118767388:-|nuORF;nc|ENSG00000125354|Q14141-4|SEPTIN6;nc|ENSG00000125354|Q14141|SEPTIN6	98.18246007543235	0.06527798761987352	4				NaN	NaN	0	NaN	1934	2387	4318
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4324	15.656	NaN	10006	30	0	3298.1	0.035	+			33623	RLSSWCLK	8	73	496.7719254259167	NaN	0	496.7718505859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RLSSWCLK_	ENSG00000165699|ENST00000298552|TSC1;ENST00000493467.5_1_9:135785858-135804259:-|nuORF;nc|ENSG00000165699|Q92574-2|TSC1;TSC1|p.L203Cfs*7|1|0.29|ENSG00000165699|chr9:132921874-132921874|A/-|frameshift_variant;TSC1|p.L463*|1|0.4|ENSG00000165699|chr9:132906781-132906781|A/-|frameshift_variant;TSC1|p.L910Wfs*21|1|0.36|ENSG00000165699|chr9:132897507-132897507|A/-|frameshift_variant	60.97194046774394	1.7418937515398478	4				NaN	NaN	0	NaN	1935	2387	4318
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4325	15.657	NaN	12225	30	0	2621.9	0.141			+	40260	STSPFGAGCLQ	11	78	534.2456580753086	1066.476763217417	2	534.2468872070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STSPFGAGCLQ_	REV__BACE1|p.L222Sfs*14|1|0.29|ENSG00000186318|chr11:117293912-117293912|G/-|frameshift_variant	69.6276240434122	0.23884409287757344	4				NaN	NaN	0	NaN	1936	2387	4318
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4343	15.697	NaN	212340	30	0	148960	0.157				-1	 	0	89	364.2076971025352	1089.6012619078056	3	364.2081298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1951	2390	4342
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4344	15.699	NaN	306960	30	0	76216	0.106	+			6239	AVSEGTKAVTK	11	122	545.8077425406127	1089.6009321480253	2	545.8089599609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVSEGTKAVTK_	ENSG00000124635|ENST00000339812|H2BC11;ENSG00000146047|ENST00000274764|H2BC1;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000196890|ENST00000693095|H2BC26;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000369385.5_1_1:149814898-149814982:+|nuORF;ENST00000436555.1_1_1:228651916-228652012:-|nuORF;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;nc|ENSG00000203814|Q5QNW6-2|H2BC18;nc|ENSG00000285480|A0A2R8Y619|H2BK1	176.59839592901017	1.0526362544376656E-05	4				NaN	NaN	0	NaN	1952	2390	4342
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4345	15.701	NaN	27830	30	0	11208	0.106				-1	 	0	69	334.5410243794937	1000.6012437386812	3	334.54150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1953	2390	4342
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4346	15.703	NaN	28696	30	0	3933.8	0.106				-1	 	0	91	501.30814892840743	1000.6017449236149	2	501.30865478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1954	2390	4342
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4347	15.705	NaN	29743	30	0	3839.1	0.106	+			35972	SEGTKAVTK	9	94	460.7553587578208	919.4961645824416	2	460.75567626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SEGTKAVTK_	ENSG00000124635|ENST00000339812|H2BC11;ENSG00000146047|ENST00000274764|H2BC1;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000196890|ENST00000693095|H2BC26;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000369385.5_1_1:149814898-149814982:+|nuORF;ENST00000436555.1_1_1:228651916-228652012:-|nuORF;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;HIST1H2BD|p.Y122H|1|0.36|ENSG00000158373|chr6:26158533-26158533|T/C|missense_variant;nc|ENSG00000203814|Q5QNW6-2|H2BC18;nc|ENSG00000285480|A0A2R8Y619|H2BK1	204.78781133344324	1.3064049516750017E-05	4				NaN	NaN	0	NaN	1955	2390	4342
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4348	15.707	NaN	5936	30	0	597.8	0.106			+	9886	EQLEILGTQ	9	73	515.7741457276029	1029.5337385220057	2	515.7767333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EQLEILGTQ_	REV__ENST00000521266.1_1_5:158588592-158600998:-|nuORF	61.691277971877994	0.19951612995419254	4				NaN	NaN	0	NaN	1956	2390	4342
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4349	15.708	NaN	3597.9	30	0	1044.8	0.036			+	-1	GEYSCPKGLG	10	51	356.49959751272445	1066.4769631383733	3	356.5001220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_GEYSC(Carbamidomethyl (C))PKGLG_	REV__ENSG00000138759|ENST00000512123|FRAS1;REV__FRAS1|p.C3202Afs*11|1|0.32|ENSG00000138759|chr4:78508825-78508825|C/-|frameshift_variant;REV__FRAS1|p.G3456Afs*3|1|0.28|ENSG00000138759|chr4:78515987-78515987|G/-|frameshift_variant;REV__FRAS1|p.P3289Lfs*45|1|0.05|ENSG00000138759|chr4:78511358-78511359|-/T|frameshift_variant;REV__FRAS1|p.V2385Sfs*37|1|0.28|ENSG00000138759|chr4:78466329-78466329|G/-|frameshift_variant;REV__nc|ENSG00000138759|Q86XX4-4|FRAS1;REV__nc|ENSG00000138759|Q86XX4-5|FRAS1;REV__nc|ENSG00000138759|Q86XX4-6|FRAS1;REV__nc|ENSG00000138759|Q86XX4|FRAS1	35.15202426646627	0.5927656479315102	4				NaN	NaN	0	NaN	1957	2390	4342
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4367	15.747	NaN	357070	30	0	86204	0.135				-1	 	0	95	685.306570784627	1368.5985886360538	2	685.3080444335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1972	2393	4366
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4368	15.749	NaN	35762	30	0	4914.5	0.106	+			27266	MEVSNMTTV	9	82	535.230254067993	1068.4459552027859	2	535.2311401367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))M(Oxidation (M))EVSNMTTV_	ENSG00000198678|ENST00000328207|OR5BS1P	49.44154591367651	0.3095138337212152	4				NaN	NaN	0	NaN	1973	2393	4366
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4369	15.751	NaN	10268	30	0	6804.4	0.106			+	34073	RSPMTPRAA	9	61	493.76302907984314	985.5115052264863	2	493.7635192871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RSPMTPRAA_	REV__RIMBP2|p.G774Efs*16|1|0.62|ENSG00000060709|chr12:130428219-130428219|C/-|frameshift_variant	34.172542307311794	0.4838870758800184	4				NaN	NaN	0	NaN	1974	2393	4366
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4370	15.753	NaN	7410	30	0	863.49	0.106	+			50590	YDILHDVSCA	10	79	568.2590056588685	1134.503458384537	2	568.2601928710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YDILHDVSCA_	ENSG00000198198|ENST00000634258|SZT2;nc|ENSG00000198198|Q5T011-4|SZT2;nc|ENSG00000198198|Q5T011-5|SZT2;SZT2|p.A1115Lfs*4|1|0.26|ENSG00000198198|chr1:43427358-43427358|G/-|frameshift_variant;SZT2|p.H875Tfs*13|1|0.16|ENSG00000198198|chr1:43425177-43425178|-/C|frameshift_variant;SZT2|p.L1644Ffs*4|1|0.36|ENSG00000198198|chr1:43431727-43431728|-/T|frameshift_variant;SZT2|p.P2844Rfs*9|1|0.34|ENSG00000198198|chr1:43443669-43443669|C/-|frameshift_variant;SZT2|p.R3241Afs*11|1|0.33|ENSG00000198198|chr1:43448401-43448401|G/-|frameshift_variant	45.97224482568171	0.49411383603842696	4				NaN	NaN	0	NaN	1975	2393	4366
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4371	15.755	NaN	5215.1	30	0	1580.9	0.106			+	22280	KTDALGMHNEG	11	60	594.76947748907	NaN	0	594.7694702148438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_KTDALGM(Oxidation (M))HNEG_	REV__ENSG00000042781|ENST00000307340|USH2A	74.1650062923329	0.11071438290901224	4				NaN	NaN	0	NaN	1976	2393	4366
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4372	15.756	NaN	2758.4	30	0	574.7	0.106	+			20932	KKALNLQK	8	62	471.8082275390625	NaN	0	471.8082275390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KKALNLQK_	ENSG00000183495|ENST00000389561|EP400;EP400|p.F1094Lfs*4|2|0.18|ENSG00000183495|chr12:132006849-132006849|T/-|frameshift_variant;EP400|p.L2071Rfs*37|1|0.23|ENSG00000183495|chr12:132043308-132043326|TCAAGAGTATTGAGTATCT/-|frameshift_variant;EP400|p.P2793Rfs*46|1|0.3|ENSG00000183495|chr12:132064707-132064707|C/-|frameshift_variant;EP400|p.Q1630Sfs*11|1|0.4|ENSG00000183495|chr12:132025670-132025670|C/-|frameshift_variant;nc|ENSG00000183495|Q96L91-3|EP400;nc|ENSG00000183495|Q96L91-4|EP400;nc|ENSG00000183495|Q96L91-5|EP400;nc|ENSG00000183495|Q96L91|EP400	55.50420428727701	1.7418937515398478	4				NaN	NaN	0	NaN	1977	2393	4366
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4373	15.758	NaN	9367	30	0	888.35	0.036				-1	KSCDLEEVM	9	76	535.230254067993	1068.4459552027859	2	536.8278198242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_KSCDLEEVM(Oxidation (M))_	ENSG00000070985|ENST00000696290|TRPM5;nc|ENSG00000070985|Q9NZQ8-2|TRPM5;nc|ENSG00000070985|Q9NZQ8-3|TRPM5	35.61828744233558	0.47037581924408073	4				NaN	NaN	0	NaN	1978	2393	4366
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4391	15.796	NaN	35340	30	0	12603	0.191	+			5302	ATVKLEHAK	9	80	498.7949061806442	995.5752594280884	2	498.79534912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATVKLEHAK_	ENSG00000118705|ENST00000237530|RPN2;nc|ENSG00000118705|P04844-2|RPN2	132.757866228626	0.013877640931359021	4				NaN	NaN	0	NaN	1993	2396	4390
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4392	15.8	NaN	38938	30	0	5784.2	0.106	+			13741	GQCGNQIGAK	10	82	516.7473355959561	1031.480118258712	2	516.748291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GQC(Carbamidomethyl (C))GNQIGAK_	CON__ENSEMBL:ENSBTAP00000025008;ENSG00000101162|ENST00000217133|TUBB1;ENSG00000104833|ENST00000264071|TUBB4A;ENSG00000137267|ENST00000333628|TUBB2A;ENSG00000137285|ENST00000259818|TUBB2B;ENSG00000173213|ENST00000308911|TUBB8B;ENSG00000188229|ENST00000340384|TUBB4B;ENSG00000196230|ENST00000327892|TUBB;ENSG00000258947|ENST00000315491|TUBB3;ENSG00000261456|ENST00000568584|TUBB8;ENST00000489942.1_1_6:3155224-3157697:-|nuORF;ENST00000554116.5_1_16:89989809-89998148:+|nuORF;ENST00000554927.1_1_16:89989809-89999206:+|nuORF;ENST00000604929.1_1_9:140135770-140136775:+|nuORF;TUBB|p.G142Afs*23|1|0.35|ENSG00000196230|chr6:30723483-30723483|G/-|frameshift_variant;TUBB2B|p.D177Hfs*21|1|0.32|ENSG00000137285|chr6:3225559-3225560|TC/-|frameshift_variant;TUBB4A|p.G141Vfs*24|2|0.35|ENSG00000104833|chr19:6496077-6496077|C/-|frameshift_variant	166.67852932204877	0.004741521871917433	4				NaN	NaN	0	NaN	1994	2396	4390
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4393	15.802	NaN	10750	30	0	2998.3	0.106			+	30184	PSKSAKPGPK	10	61	332.86551706516104	995.5747217956832	3	332.86602783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PSKSAKPGPK_	REV__ENSG00000187527|ENST00000342358|ATP13A5	24.519189625965996	0.6795976720565101	4				NaN	NaN	0	NaN	1995	2396	4390
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4394	15.804	NaN	16561	30	0	3186.8	0.106	+			18916	IVNASTTNK	9	76	474.2608920717769	946.5072312103538	2	474.26116943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IVNASTTNK_	ENSG00000078269|ENST00000355585|SYNJ2;nc|ENSG00000078269|O15056-2|SYNJ2;nc|ENSG00000078269|O15056-3|SYNJ2;SYNJ2|p.L1226Tfs*32|1|0.22|ENSG00000078269|chr6:158093029-158093030|-/C|frameshift_variant;SYNJ2|p.P1225Hfs*19|1|0.23|ENSG00000078269|chr6:158093030-158093030|C/-|frameshift_variant	99.01295224348159	0.040209060045561164	4				NaN	NaN	0	NaN	1996	2396	4390
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4395	15.805	NaN	7315	30	0	1704.5	0.106	+			14513	GTDEHVVCK	9	75	522.7418557695518	1043.4691586059034	2	522.742919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_GTDEHVVC(Carbamidomethyl (C))K_	nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM	87.69643885390035	0.07135982304947239	4				NaN	NaN	0	NaN	1997	2396	4390
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4396	15.807	NaN	11589	30	0	3256.4	0.106			+	1682	AGSYRKTP	8	65	440.23723307146224	878.4599132097245	2	440.2375793457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AGSYRKTP_	REV__CPSF7|p.S220Kfs*99|1|0.2|ENSG00000149532|chr11:61416411-61416412|-/T|frameshift_variant	56.72105179125745	0.5342425954139568	4				NaN	NaN	0	NaN	1998	2396	4390
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4397	15.809	NaN	26887	30	0	10161	0.038			+	17074	HRLLGSSQSFS	11	103	406.87850004487615	1217.6136707348285	3	406.8790283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HRLLGSSQSFS_	REV__ENSG00000183647|ENST00000597700|ZNF530;REV__ENST00000598297.1_1_19:58116980-58118690:+|nuORF;REV__nc|ENSG00000183647|Q6P9A1|ZNF530	30.139142570347243	0.6736561713168612	4				NaN	NaN	0	NaN	1999	2396	4390
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4413	15.843	NaN	15873	30	0	2028.1	0.214	+			30085	PQQLTHNQ	8	67	483.24303754154636	964.4715221498927	2	483.2434387207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PQQLTHNQ_	MED1|p.Q744Sfs*36|1|0.7|ENSG00000125686|chr17:39409991-39409991|G/-|frameshift_variant	76.84663266511073	0.3498490246073164	4				NaN	NaN	0	NaN	2012	2399	4412
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4414	15.847	NaN	13897	30	0	3021	0.106	+			22558	KTSGSNVKIVK	11	77	580.8521396176675	1159.6897263021349	2	580.8534545898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTSGSNVKIVK_	ENSG00000124172|ENST00000243997|ATP5F1E	125.71293069911285	0.009199108266606413	4				NaN	NaN	0	NaN	2013	2399	4412
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4415	15.849	NaN	6133.5	30	0	1988.1	0.106	+			14694	GTIGKKFARK	10	62	369.23243410847215	1104.6754729256165	3	369.2327880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTIGKKFARK_	ENSG00000135698|ENST00000258169|MPHOSPH6	42.396135135203025	0.5270658956260207	4				NaN	NaN	0	NaN	2014	2399	4412
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4416	15.851	NaN	4307.9	30	0	1857.5	0.106	+			22248	KTALKACKTPQ	11	51	396.89715576171875	NaN	0	396.89715576171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTALKACKTPQ_	ENSG00000173821|ENST00000582970|RNF213;nc|ENSG00000173821|Q63HN8-4|RNF213;nc|ENSG00000173821|Q63HN8|RNF213;RNF213|p.C5022Lfs*7|1|0.3|ENSG00000173821|chr17:80389237-80389237|G/-|frameshift_variant	26.749707702089633	0.4462038980881566	4				NaN	NaN	0	NaN	2015	2399	4412
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4417	15.852	NaN	3106.4	30	0	227.01	0.106			+	17960	IGTDPHVQK	9	71	497.7690564753222	NaN	0	497.77410888671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IGTDPHVQK_	REV__ENSG00000124635|ENST00000339812|H2BC11;REV__ENSG00000146047|ENST00000274764|H2BC1;REV__ENSG00000158373|ENST00000377777|H2BC5;REV__ENSG00000180596|ENST00000396984|H2BC4;REV__ENSG00000184678|ENST00000369155|H2BC21;REV__ENSG00000185130|ENST00000377401|H2BC13;REV__ENSG00000196890|ENST00000693095|H2BC26;REV__ENSG00000197903|ENST00000356950|H2BC12;REV__ENSG00000203814|ENST00000369167|H2BC18;REV__ENSG00000233822|ENST00000612898|H2BC15;REV__ENSG00000234289|ENST00000599962|H2BC12L;REV__ENSG00000273703|ENST00000621112|H2BC14;REV__ENSG00000273802|ENST00000541790|H2BC8;REV__ENSG00000274290|ENST00000614097|H2BC6;REV__ENSG00000274641|ENST00000616182|H2BC17;REV__ENSG00000275713|ENST00000619466|H2BC9;REV__ENSG00000276410|ENST00000615966|H2BC3;REV__ENSG00000277224|ENST00000356530|H2BC7;REV__ENSG00000278588|ENST00000377733|H2BC10;REV__ENST00000436555.1_1_1:228651947-228652295:-|nuORF;REV__ENST00000469483.1_1_1:149775510-149783878:-|nuORF;REV__nc|ENSG00000203814|Q5QNW6-2|H2BC18	60.97194046774394	0.14517358171632622	4				NaN	NaN	0	NaN	2016	2399	4412
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4418	15.854	NaN	8141.7	30	0	2273.1	0.033	+			15190	GTSNTTAIK	9	57	446.7400749565425	NaN	0	446.7401123046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTSNTTAIK_	ENSG00000117222|ENST00000264515|RBBP5;nc|ENSG00000117222|Q15291-2|RBBP5;RBBP5|p.P419Hfs*9|2|0.3|ENSG00000117222|chr1:205096822-205096822|G/-|frameshift_variant	74.1650062923329	0.09137789763820878	4				NaN	NaN	0	NaN	2017	2399	4412
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4435	15.889	NaN	41914	30	0	8411.8	0.214	+			39819	STLGSQGQTGK	11	94	532.2719015246344	1062.5292501160686	2	532.2728271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STLGSQGQTGK_	ENSG00000124641|ENST00000265350|MED20;nc|ENSG00000288721|Q9H944-2|MED20	215.71603211341287	2.0157296340413544E-12	4				NaN	NaN	0	NaN	2031	2402	4434
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4436	15.893	NaN	24421	30	0	16674	0.106				-1	 	0	59	413.2263071292638	824.4380613253276	2	413.2266845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2032	2402	4434
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4437	15.895	NaN	28109	30	0	3839.9	0.106				-1	 	0	83	473.2711154351004	944.5276779370008	2	473.2714538574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2033	2402	4434
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4438	15.897	NaN	10785	30	0	805.48	0.106			+	21767	KQQVYRDTT	9	78	569.7965053023212	NaN	0	569.7965087890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KQQVYRDTT_	REV__ENSG00000057935|ENST00000405094|MTA3;REV__ENSG00000182979|ENST00000331320|MTA1;REV__ENST00000472767.5_1_2:42922919-42924972:+|nuORF;REV__ENST00000475383.5_1_2:42922919-42935079:+|nuORF;REV__MTA1|p.R546Afs*8|1|0.13|ENSG00000182979|chr14:105466433-105466433|C/-|frameshift_variant;REV__MTA1|p.T578Pfs*18|1|0.07|ENSG00000182979|chr14:105466528-105466528|C/-|frameshift_variant;REV__MTA3|p.G456Lfs*48|1|0.05|ENSG00000057935|chr2:42708935-42708936|-/ATTACTG|frameshift_variant;REV__nc|ENSG00000057935|Q9BTC8-2|MTA3;REV__nc|ENSG00000182979|Q13330-2|MTA1;REV__nc|ENSG00000182979|Q13330-3|MTA1	99.37495909608758	0.022697614825424036	4				NaN	NaN	0	NaN	2034	2402	4434
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4439	15.899	NaN	12749	30	0	1281.7	0.106	+			997	AEKKQTEQL	9	87	537.7926859364602	1073.5708189397203	2	537.7936401367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEKKQTEQL_	CENPF|p.S2957Afs*6|1|0.52|ENSG00000117724|chr1:214657310-214657310|A/-|frameshift_variant;CENPF|p.T1974Pfs*11|1|0.22|ENSG00000117724|chr1:214645483-214645483|A/-|frameshift_variant;CENPF|p.T2189Hfs*3|1|0.28|ENSG00000117724|chr1:214646131-214646131|A/-|frameshift_variant;ENSG00000117724|ENST00000366955|CENPF	98.58198989935565	0.04066992115528678	4				NaN	NaN	0	NaN	2035	2402	4434
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4440	15.9	NaN	3028.4	30	0	291.22	0.035			+	32317	QTRPPCGQS	9	62	515.7405274092526	NaN	0	515.7402954101562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_QTRPPC(Carbamidomethyl (C))GQS_	REV__ENSG00000169220|ENST00000408923|RGS14;REV__ENST00000425155.6_1_5:176795054-176799073:+|nuORF;REV__ENST00000514102.5_1_5:176797843-176799073:+|nuORF;REV__nc|ENSG00000169220|O43566-5|RGS14;REV__nc|ENSG00000169220|O43566-6|RGS14	52.936696900407355	0.1864545979552969	4				NaN	NaN	0	NaN	2036	2402	4434
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4441	15.901	NaN	22744	30	0	5394.3	0.14				-1	 	0	79	499.76054958131925	997.5065462294385	2	499.7611083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2037	2402	4434
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4458	15.939	NaN	32719	30	0	14741	0.214	+			4907	ATQKPLVSK	9	89	486.2972756224861	970.5799983117722	2	486.2975158691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATQKPLVSK_	ENSG00000159166|ENST00000391967|LAD1;LAD1|p.G152Afs*67|1|0.17|ENSG00000159166|chr1:201386906-201386906|C/-|frameshift_variant	131.61620852596164	0.014413238321579053	4				NaN	NaN	0	NaN	2051	2405	4457
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4459	15.943	NaN	10991	30	0	773.02	0.106	+			35053	SAEQHQRTL	9	71	535.2722489431967	1068.5299449531933	2	535.2732543945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAEQHQRTL_	ENSG00000135968|ENST00000309863|GCC2;ENST00000393321.2_3_2:109102933-109106471:+|nuORF	50.033510581677724	0.3025703251535696	4				NaN	NaN	0	NaN	2052	2405	4457
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4460	15.945	NaN	6917.3	30	0	2301.8	0.106			+	40194	STRQIYTRK	9	41	384.8874302992001	1151.6404614978003	3	384.88751220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STRQIYTRK_	REV__ENST00000503900.1_1_5:75207117-75207609:+|nuORF	35.61828744233558	0.47037581924408073	4				NaN	NaN	0	NaN	2053	2405	4457
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4461	15.946	NaN	15082	30	0	1925.5	0.106	+			16295	HEHGQLHSM	9	82	538.239720993929	1074.464889054658	2	538.24072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HEHGQLHSM_	ENSG00000196504|ENST00000545856|PRPF40A;nc|ENSG00000196504|O75400-2|PRPF40A;nc|ENSG00000196504|O75400-3|PRPF40A;nc|ENSG00000196504|O75400|PRPF40A	98.58198989935565	0.04066992115528678	4				NaN	NaN	0	NaN	2054	2405	4457
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4462	15.948	NaN	5179.3	30	0	704.6	0.106			+	44443	TSMSFSSHK	9	69	506.23122389443904	1010.4478948556781	2	506.2318420410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TSMSFSSHK_	REV__ENST00000445995.2_1_9:98056039-98057089:+|nuORF	53.351449002276354	0.2690372970092375	4				NaN	NaN	0	NaN	2055	2405	4457
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4463	15.95	NaN	65314	30	0	25268	0.037				-1	 	0	94	362.90400558652516	1085.6901873597756	3	362.9044189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2056	2405	4457
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4464	15.951	NaN	2067.5	30	0	198.73	0.142	+			31259	QHQRGRSKR	9	60	576.827023181984	1151.639493430768	2	576.828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QHQRGRSKR_	ENST00000525109.1_1_15:66585988-66599106:+|nuORF	38.753607047826485	0.4348790777924195	4				NaN	NaN	0	NaN	2057	2405	4457
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4483	15.989	NaN	11688	30	0	2260	0.215				-1	 	0	78	543.8525681857839	1085.6905834383676	2	543.8536376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2073	2408	4482
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4484	15.993	NaN	19345	30	0	6138.2	0.106				-1	 	0	61	369.5604182323848	1105.6594252973543	3	369.5608215332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2074	2408	4482
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4485	15.995	NaN	9948.7	30	0	1581.6	0.106	+			20579	KFTVQTKVR	9	70	553.8373802350916	1105.660207536983	2	553.8381958007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KFTVQTKVR_	ENST00000524729.1_1_11:65601488-65617212:+|nuORF;ENST00000531503.5_1_11:65603108-65617212:+|nuORF	68.84614121027924	0.14577793175421136	4				NaN	NaN	0	NaN	2075	2408	4482
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4486	15.996	NaN	2691.4	30	0	317.58	0.106			+	20230	KELRTELE	8	74	509.2825012207031	NaN	0	509.2825012207031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KELRTELE_	REV__ENSG00000072818|ENST00000158762|ACAP1;REV__ENST00000576628.1_1_17:7240053-7245794:+|nuORF	66.42927471994793	1.7418937515398478	4				NaN	NaN	0	NaN	2076	2408	4482
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4487	15.998	NaN	2645.6	30	0	584.67	0.106				-1	 	0	45	327.1839445107783	652.3533360883566	2	327.1844482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2077	2408	4482
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4488	16	NaN	5050.6	30	0	682.5	0.034	+			40550	SVACPGAQK	9	59	459.2282474522474	916.4419419712948	2	459.2287292480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_SVAC(Carbamidomethyl (C))PGAQK_	ENSG00000127993|ENST00000265732|RBM48;nc|ENSG00000127993|Q5RL73-2|RBM48	64.20726635412375	0.17854274437659667	4				NaN	NaN	0	NaN	2078	2408	4482
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4489	16.001	NaN	5119.2	30	0	1127.7	0.139			+	21322	KLTNESKK	8	69	474.2790312021183	946.5435094710366	2	474.278564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KLTNESKK_	REV__tr|U7SLV3|U7SLV3_FUSNUYwqI/YxiCfamilyproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01902PE=4SV=1;REV__tr|U7T3K6|U7T3K6_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00699PE=4SV=1	74.25504064058377	0.37144338840759816	4				NaN	NaN	0	NaN	2079	2408	4482
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4507	16.04	NaN	19645	30	0	3072.7	0.214	+			3140	ASHTGSSL	8	69	380.1849492978692	758.3553456625384	2	380.1851806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASHTGSSL_	ENSG00000168062|ENST00000301887|BATF2;nc|ENSG00000168062|Q8N1L9-2|BATF2	94.00642277110589	0.2653416297186628	4				NaN	NaN	0	NaN	2094	2411	4506
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4508	16.044	NaN	34851	30	0	14935	0.106			+	-1	KEALPKMKV	9	85	530.3170392654076	1058.6195255976152	2	530.3173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_KEALPKM(Oxidation (M))KV_	REV__tr|U7T180|U7T180_FUSNUValine--tRNAligaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=valSPE=3SV=1	51.33545320467046	0.2872990594074956	4				NaN	NaN	0	NaN	2095	2411	4506
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4509	16.046	NaN	36770	30	0	13799	0.106				-1	 	0	94	353.87989954790555	1058.6178692439166	3	353.8804016113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2096	2411	4506
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4510	16.047	NaN	2904.2	30	0	265.92	0.106			+	30784	QDYTEQKPI	9	67	561.2782594327944	1120.5419659323886	2	561.279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QDYTEQKPI_	REV__nc|ENSG00000291014|Q9Y6N3|CLCA3P	69.6276240434122	0.14239879520340665	4				NaN	NaN	0	NaN	2097	2411	4506
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4511	16.049	NaN	6174.4	30	0	583.92	0.106	+			38190	SQEEQIARK	9	72	544.7891367229624	NaN	0	544.7886352539062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SQEEQIARK_	ENSG00000118898|ENST00000345988|PPL;PPL|p.K1530Gfs*18|1|0.27|ENSG00000118898|chr16:4884058-4884068|GCTCGCGCTTG/-|frameshift_variant	69.6276240434122	0.10825701912424071	4				NaN	NaN	0	NaN	2098	2411	4506
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4512	16.051	NaN	11643	30	0	1867.1	0.036	+			989	AEKKEMKTI	9	80	539.3013860918522	1076.5882192505044	2	539.3025512695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEKKEMKTI_	ENSG00000163466|ENST00000315717|ARPC2;ENST00000487321.1_1_2:219114510-219118635:+|nuORF	150.36159442982594	0.006784847064083231	4				NaN	NaN	0	NaN	2099	2411	4506
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4513	16.052	NaN	15209	30	0	2028.2	0.14	+			16060	HAYEHSLGK	9	81	521.259150417815	1040.50374790243	2	521.2594604492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HAYEHSLGK_	ENSG00000105355|ENST00000221957|PLIN3;nc|ENSG00000105355|O60664-2|PLIN3;nc|ENSG00000105355|O60664-3|PLIN3;nc|ENSG00000105355|O60664-4|PLIN3	124.08010499294276	0.018729767491916592	4				NaN	NaN	0	NaN	2100	2411	4506
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4531	16.09	NaN	25172	30	0	2181.1	0.213				-1	 	0	98	626.3065316345909	1250.5985103359817	2	626.3074951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2115	2414	4530
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4532	16.094	NaN	9586.5	30	0	4282.2	0.106			+	50727	YEHSCPLKRL	10	62	415.88542945367976	1244.6344589612393	3	415.8857727050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YEHSCPLKRL_	REV__ENSG00000131263|ENST00000332687|RLIM;REV__ENST00000558657.1_1_15:50088089-50088203:+|nuORF;REV__nc|ENSG00000131263|Q9NVW2-2|RLIM	21.9598887501803	0.7004979571547932	4				NaN	NaN	0	NaN	2116	2414	4530
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4533	16.096	NaN	23697	30	0	4437.8	0.106	+			42543	TARREDESY	9	88	563.7590389673122	1125.5035250014244	2	563.76025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TARREDESY_	ENSG00000171824|ENST00000376936|EXOSC10;ENST00000485606.1_1_1:11140819-11141291:-|nuORF;nc|ENSG00000171824|Q01780-2|EXOSC10	30.317721548370564	0.5199124245378496	4				NaN	NaN	0	NaN	2117	2414	4530
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4534	16.098	NaN	8049.5	30	0	1124.7	0.106	+			20316	KEQEQAQKL	9	74	551.298025403956	1100.5814978747119	2	551.2989501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEQEQAQKL_	ENSG00000136021|ENST00000360820|SCYL2	181.4070731898895	0.0011547877412507563	4				NaN	NaN	0	NaN	2118	2414	4530
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4535	16.099	NaN	5942.5	30	0	1003.4	0.106	+			30267	PTDNAQDFYD	10	72	593.2371799978845	1184.4598070625689	2	593.2386474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PTDNAQDFYD_	ENSG00000127948|ENST00000461988|POR;POR|p.I444Sfs*101|1|0.44|ENSG00000127948|chr7:75985133-75985133|C/-|frameshift_variant	62.107414245175825	0.3466735403679669	4				NaN	NaN	0	NaN	2119	2414	4530
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4536	16.101	NaN	14760	30	0	4913.3	0.037			+	25891	LSGDLIRRQG	10	58	372.21539429643894	1113.6243534895168	3	372.21575927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSGDLIRRQG_	REV__ENSG00000133195|ENST00000255559|SLC39A11;REV__ENST00000581005.1_1_17:71069947-71084903:-|nuORF;REV__nc|ENSG00000133195|Q8N1S5|SLC39A11	41.42661286455405	0.5359995577334734	4				NaN	NaN	0	NaN	2120	2414	4530
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4537	16.102	NaN	4021.3	30	0	668.06	0.139			+	13560	GLSTDKQIG	9	58	459.7474860273816	917.4804191215633	2	459.7479248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GLSTDKQIG_	REV__ENST00000466125.1_1_17:61932188-61934782:+|nuORF;REV__ENST00000469014.1_1_17:61926730-61934782:+|nuORF;REV__ENST00000482005.5_1_17:61932137-61934782:+|nuORF	87.75429964447693	0.0711966946989736	4				NaN	NaN	0	NaN	2121	2414	4530
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4554	16.139	NaN	14942	30	0	5140.2	0.214	+			14473	GTCGKAFSR	9	74	492.23909027973684	982.4636276262737	2	492.239501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GTC(Carbamidomethyl (C))GKAFSR_	ENSG00000124216|ENST00000244050|SNAI1	99.01295224348159	0.040209060045561164	4				NaN	NaN	0	NaN	2135	2417	4553
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4555	16.142	NaN	10607	30	0	3378.2	0.106	+			15300	GTVDKKMVEK	10	77	567.8121375499699	1133.6097221667396	2	567.8132934570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTVDKKMVEK_	CBL|p.L272*|1|0.25|ENSG00000110395|chr11:119274894-119274894|T/-|frameshift_variant;CBL|p.V581Cfs*4|1|0.08|ENSG00000110395|chr11:119285359-119285360|-/C|frameshift_variant;ENSG00000110395|ENST00000264033|CBL	166.0711670676379	0.0049346292030699205	4				NaN	NaN	0	NaN	2136	2417	4553
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4556	16.144	NaN	5000.5	30	0	1180.8	0.106			+	42610	TATGLGGPK	9	53	401.22644166736075	800.4383304015215	2	401.2268371582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TATGLGGPK_	REV__tr|U7ST66|U7ST66_FUSNU2-dehydro-3-deoxyphosphooctonatealdolaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=kdsAPE=3SV=1	42.396135135203025	0.392153681582562	4				NaN	NaN	0	NaN	2137	2417	4553
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4557	16.146	NaN	2837.7	30	0	368.13	0.106			+	40396	STVDWARR	8	61	495.7615676154543	989.5085822977086	2	495.7637023925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STVDWARR_	REV__ENSG00000179709|ENST00000291971|NLRP8;REV__nc|ENSG00000179709|Q86W28-2|NLRP8;REV__NLRP8|p.F1005Sfs*20|1|0.05|ENSG00000179709|chr19:55979528-55979528|C/-|frameshift_variant;REV__NLRP8|p.K222Rfs*2|1|0.12|ENSG00000179709|chr19:55954719-55954719|A/-|frameshift_variant	37.15910966729921	0.6739408393984688	4				NaN	NaN	0	NaN	2138	2417	4553
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4558	16.148	NaN	3284	30	0	452.26	0.106	+			16302	HEHPVNKI	8	60	487.2637971897349	972.5130414462698	2	487.26422119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HEHPVNKI_	DAB2|p.F398Lfs*15|1|0.36|ENSG00000153071|chr5:39382765-39382765|A/-|frameshift_variant;ENSG00000153071|ENST00000320816|DAB2;nc|ENSG00000153071|P98082-2|DAB2;nc|ENSG00000153071|P98082-3|DAB2	45.97224482568171	0.6192535143389125	4				NaN	NaN	0	NaN	2139	2417	4553
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4559	16.15	NaN	4706.7	30	0	1280.5	0.036			+	37181	SIYLSKTIQ	9	43	351.53674811313533	NaN	0	351.53668212890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SIYLSKTIQ_	REV__ENSG00000167065|ENST00000334679|DUSP18	31.529811441608018	0.3183796599642538	4				NaN	NaN	0	NaN	2140	2417	4553
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4560	16.15	NaN	2669.3	30	0	481.01	0.143	+			48525	VTNPDIAAKKK	11	47	395.5710803182429	1183.6914115549287	3	395.5712585449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VTNPDIAAKKK_	ENSG00000120800|ENST00000261637|UTP20	31.634271133179894	0.6579734920221648	4				NaN	NaN	0	NaN	2141	2417	4553
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4578	16.19	NaN	6748.3	30	0	847.65	0.213	+			34187	RTCWETTKK	9	76	605.3054673038097	1208.5963816744193	2	605.3060302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_RTC(Carbamidomethyl (C))WETTKK_	ENST00000504956.5_1_4:87869676-87967907:+|nuORF;ENST00000511442.1_2_4:87869713-87967910:+|nuORF	75.04331003522576	0.118981335847003	4				NaN	NaN	0	NaN	2156	2420	4577
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4579	16.193	NaN	8757.8	30	0	1000	0.106				-1	CENEKEMKSSI	11	78	685.799013029449	1369.583473125698	2	685.800537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_C(Carbamidomethyl (C))ENEKEM(Oxidation (M))KSSI_	ENSG00000117139|ENST00000367265|KDM5B;KDM5B|p.A303Pfs*37|1|0.17|ENSG00000117139|chr1:202762711-202762711|T/-|frameshift_variant;KDM5B|p.K293Rfs*51|1|0.03|ENSG00000117139|chr1:202762741-202762742|-/TTCCCTTCCTT|frameshift_variant;nc|ENSG00000117139|Q9UGL1-2|KDM5B	49.536043120802724	0.4274608637932522	4				NaN	NaN	0	NaN	2157	2420	4577
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4580	16.195	NaN	16102	30	0	5593.1	0.106	+			9025	EGDQGPQGPQG	11	74	535.2302967077105	1068.446040482221	2	535.2311401367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EGDQGPQGPQG_	ENSG00000092758|ENST00000649368|COL9A3;ENST00000466192.5_1_20:61463352-61472081:+|nuORF;ENST00000467819.5_1_20:61467799-61472081:+|nuORF	75.04331003522576	0.19369523587789836	4				NaN	NaN	0	NaN	2158	2420	4577
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4581	16.197	NaN	7387.2	30	0	1273.2	0.106	+			34188	RTCWETTKK	9	78	403.872378676087	1208.595306628461	3	403.8728942871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_RTC(Carbamidomethyl (C))WETTKK_	ENST00000504956.5_1_4:87869676-87967907:+|nuORF;ENST00000511442.1_2_4:87869713-87967910:+|nuORF	97.59673978297657	0.04344766104981724	4				NaN	NaN	0	NaN	2159	2420	4577
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4582	16.199	NaN	8406.2	30	0	934.71	0.106				-1	 	0	66	435.77342674415496	869.5323005551099	2	435.7737731933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2160	2420	4577
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4583	16.201	NaN	10923	30	0	840.88	0.037			+	46969	VKKKKKNDL	9	79	367.5760082342342	1099.7061953029026	3	367.5763854980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VKKKKKNDL_	REV__tr|U7SSX4|U7SSX4_FUSNUDUF3102domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01534PE=4SV=1	47.95952297671804	0.32689736945648856	4				NaN	NaN	0	NaN	2161	2420	4577
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4584	16.201	NaN	7425.3	30	0	1552	0.139	+			35331	SANTNTVPK	9	66	466.24615286263986	930.4777527920797	2	466.2456970214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SANTNTVPK_	ENSG00000165417|ENST00000553612|GTF2A1	104.01359247289065	0.03510646158778409	4				NaN	NaN	0	NaN	2162	2420	4577
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4602	16.24	NaN	21566	30	0	3744	0.214				-1	 	0	82	494.79238481355395	987.5702166939079	2	494.7926940917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2177	2423	4601
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4603	16.244	NaN	22523	30	0	2516.1	0.106	+			12680	GEKDTAKSL	9	88	474.75300910194727	NaN	0	474.75311279296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEKDTAKSL_	ENSG00000013364|ENST00000357402|MVP	99.01295224348159	0.023427377858318825	4				NaN	NaN	0	NaN	2178	2423	4601
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4604	16.246	NaN	21381	30	0	5533.5	0.106				-1	 	0	76	505.74793934959825	1009.4813257659965	2	505.74847412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2179	2423	4601
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4605	16.248	NaN	5404	30	0	602.81	0.106			+	-1	GVLMKAELE	9	74	503.2664955141024	NaN	0	503.2663879394531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_GVLM(Oxidation (M))KAELE_	REV__tr|U7SUC6|U7SUC6_FUSNUABCtransporterATP-bindingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01185PE=4SV=1	37.15910966729921	0.2899585034171616	4				NaN	NaN	0	NaN	2180	2423	4601
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4606	16.249	NaN	7131.8	30	0	3082.8	0.106	+			32690	RAGGVMKIVR	10	61	551.8288153986348	1101.6430778640695	2	551.8297729492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_RAGGVM(Oxidation (M))KIVR_	DIS3|p.F775Lfs*30|1|0.43|ENSG00000083520|chr13:72761940-72761940|A/-|frameshift_variant;ENSG00000083520|ENST00000377767|DIS3;ENST00000545453.5_2_13:73355107-73355970:-|nuORF;nc|ENSG00000083520|Q9Y2L1-2|DIS3	66.42927471994793	0.3073667423445326	4				NaN	NaN	0	NaN	2181	2423	4601
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4607	16.251	NaN	5387.3	30	0	1524.3	0.034			+	31753	QPEPRSKP	8	63	469.7557723795152	937.4969918258304	2	469.7561340332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QPEPRSKP_	REV__ENSG00000111981|ENST00000229708|ULBP1;REV__ULBP1|p.P215Qfs*27|1|0.37|ENSG00000111981|chr6:149970031-149970031|C/-|frameshift_variant	60.97194046774394	0.49215940876911696	4				NaN	NaN	0	NaN	2182	2423	4601
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4608	16.252	NaN	9688.5	30	0	2935.2	0.141	+			30859	QEHQGHQTF	9	62	556.24875473304	1110.4829565328798	2	556.2496337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QEHQGHQTF_	ENSG00000132274|ENST00000379965|TRIM22;ENST00000460454.1_1_11:5717462-5717939:+|nuORF;ENST00000480395.5_1_11:5717822-5718591:+|nuORF;nc|ENSG00000132274|Q8IYM9-2|TRIM22;TRIM22|p.S376Tfs*3|1|0.09|ENSG00000132274|chr11:5709277-5709278|-/CATG|frameshift_variant	47.95952297671804	0.32689736945648856	4				NaN	NaN	0	NaN	2183	2423	4601
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4626	16.291	NaN	63377	30	0	18585	0.2			+	1989	AKELATIKK	9	86	334.54990718893123	NaN	0	334.5498962402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AKELATIKK_	REV__TEKT1|p.N295K|1|0.18|ENSG00000167858|chr17:6800911-6800911|A/T|missense_variant	52.936696900407355	0.1864545979552969	4				NaN	NaN	0	NaN	2198	2426	4625
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4627	16.294	NaN	15928	30	0	2837.2	0.106				-1	 	0	67	501.32080600077427	500.3135295341743	1	501.3212585449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2199	2426	4625
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4628	16.296	NaN	10331	30	0	2908	0.106	+			15102	GTQKQQGLMK	10	65	559.8024364178873	1117.5903199025745	2	559.8034057617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTQKQQGLMK_	ENSG00000134398|ENST00000256797|ERN2;ERN2|p.L515Wfs*48|1|0.41|ENSG00000134398|chr16:23700665-23700665|G/-|frameshift_variant;ERN2|p.Q822Rfs*35|1|0.26|ENSG00000134398|chr16:23692019-23692019|G/-|frameshift_variant	93.1432384553994	0.11307820852620741	4				NaN	NaN	0	NaN	2200	2426	4625
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4629	16.298	NaN	10185	30	0	3258	0.106				-1	 	0	52	418.2291150322456	834.4436771312912	2	418.2294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2201	2426	4625
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4630	16.3	NaN	8941.2	30	0	5033.4	0.106	+			30878	QEKEEQHQL	9	58	584.7833446623047	NaN	0	584.783447265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QEKEEQHQL_	ENSG00000107581|ENST00000369144|EIF3A;nc|ENSG00000107581|Q14152-2|EIF3A	74.1650062923329	0.09137789763820878	4				NaN	NaN	0	NaN	2202	2426	4625
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4631	16.301	NaN	3302.6	30	0	362.38	0.106	+			18000	IIAKVTAKK	9	68	486.3336703436437	970.6527877540874	2	486.3338928222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IIAKVTAKK_	ENSG00000155008|ENST00000373173|APOOL	62.107414245175825	0.1960472003779324	4				NaN	NaN	0	NaN	2203	2426	4625
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4632	16.303	NaN	11482	30	0	4070.7	0.038	+			35501	SATSTDVV	8	54	390.1912158481586	NaN	0	390.1911926269531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SATSTDVV_	tr|U7SU48|U7SU48_FUSNUTrimericautotransporteradhesinYadA-likeC-terminalmembraneanchordomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01019PE=3SV=1	44.53106598305862	1.7418937515398478	4				NaN	NaN	0	NaN	2204	2426	4625
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4650	16.341	NaN	292940	30	0	51363	0.062	+			44987	TVDEKNYTK	9	79	549.2759633808744	1096.5373738285487	2	549.2769775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVDEKNYTK_	ENSG00000182551|ENST00000327435|ADI1;nc|ENSG00000182551|Q9BV57-2|ADI1	169.6522961985778	0.0028262690464207238	4				NaN	NaN	0	NaN	2219	2429	4649
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4651	16.342	NaN	230620	30	0	74242	0.106			+	-1	SIDKMMRGK	9	100	366.5200594250483	1096.538348875345	3	366.5205383300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Oxidation (M)	_SIDKM(Oxidation (M))M(Oxidation (M))RGK_	REV__ENSG00000197106|ENST00000331565|SLC6A17	37.81151784470057	0.4459294069877048	4				NaN	NaN	0	NaN	2220	2429	4649
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4652	16.344	NaN	22337	30	0	6613.8	0.106			+	44292	TSAQLQHYQP	10	59	391.52774183743657	1171.5613961125098	3	391.52783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TSAQLQHYQP_	REV__ENSG00000109111|ENST00000314616|SUPT6H;REV__nc|ENSG00000109111|Q7KZ85-2|SUPT6H;REV__nc|ENSG00000109111|Q7KZ85-3|SUPT6H;REV__SUPT6H|p.T1632A|1|0.39|ENSG00000109111|chr17:28701028-28701028|A/G|missense_variant	23.04248740728303	0.69165701907106	4				NaN	NaN	0	NaN	2221	2429	4649
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4653	16.346	NaN	29577	30	0	3614.6	0.106	+			41075	SVIKTQETK	9	85	517.2973776846284	1032.5802024360567	2	517.298095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVIKTQETK_	ENSG00000120690|ENST00000239882|ELF1;nc|ENSG00000120690|P32519-2|ELF1	182.3913890336628	0.0010559746847940753	4				NaN	NaN	0	NaN	2222	2429	4649
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4654	16.348	NaN	41299	30	0	17278	0.106	+			375	AARRHLHTRPN	11	87	443.5853788050545	1327.7343070153636	3	443.585693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AARRHLHTRPN_	ENST00000267396.8_1_14:23356244-23356376:+|nuORF	19.1035232394073	0.7810393085260824	4				NaN	NaN	0	NaN	2223	2429	4649
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4655	16.349	NaN	6263.3	30	0	864.08	0.106	+			40491	STYGTHIHEK	10	76	586.7876437727386	1171.5607346122772	2	586.7883911132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STYGTHIHEK_	ENSG00000119203|ENST00000238112|CPSF3	106.68306549817024	0.05784995512091477	4				NaN	NaN	0	NaN	2224	2429	4649
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4656	16.351	NaN	11002	30	0	2196.2	0.106	+			4944	ATQQPVTADK	10	74	529.7773200217696	NaN	0	529.764892578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATQQPVTADK_	ENSG00000095787|ENST00000354911|WAC;ENST00000345541.6_1_10:28900683-28903615:+|nuORF;nc|ENSG00000095787|Q9BTA9-2|WAC;nc|ENSG00000095787|Q9BTA9-5|WAC	72.2432373244024	0.13763297510833816	4				NaN	NaN	0	NaN	2225	2429	4649
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4657	16.353	NaN	15998	30	0	2464.5	0.036			+	-1	SVDMLDQPM	9	84	526.2248926138046	1050.4352322944092	2	526.225830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Oxidation (M)	_SVDMLDQPM(Oxidation (M))_	REV__nc|ENSG00000167037|Q2NKQ1|SGSM1	45.9519527083369	0.35044536499095585	4				NaN	NaN	0	NaN	2226	2429	4649
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4675	16.39	NaN	27480	30	0	2308.3	0.214	+			34421	RTTHNIIEK	9	95	556.3138721345954	1110.6131913359907	2	556.3148193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTTHNIIEK_	ENSG00000198911|ENST00000361204|SREBF2;nc|ENSG00000198911|Q12772-2|SREBF2	125.71293069911285	0.017741295328254008	4				NaN	NaN	0	NaN	2241	2432	4674
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4676	16.393	NaN	10835	30	0	961.39	0.106	+			42969	TEKEGKDQEL	10	88	588.7895913566637	1175.5646297801272	2	588.7909545898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEKEGKDQEL_	ENSG00000137497|ENST00000393695|NUMA1;nc|ENSG00000137497|Q14980-2|NUMA1;nc|ENSG00000137497|Q14980-3|NUMA1;nc|ENSG00000137497|Q14980-4|NUMA1;NUMA1|p.A1067S|1|0.25|ENSG00000137497|chr11:72014304-72014304|C/A|missense_variant;NUMA1|p.K1766Rfs*2|1|0.39|ENSG00000137497|chr11:72007357-72007357|G/-|frameshift_variant;NUMA1|p.L1786Pfs*18|1|0.23|ENSG00000137497|chr11:72007295-72007296|-/G|frameshift_variant	136.98908636845044	0.01155686115611441	4				NaN	NaN	0	NaN	2242	2432	4674
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4677	16.395	NaN	8113.4	30	0	2963.4	0.106				-1	 	0	56	383.5348241024061	1147.5826429074184	3	383.534912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2243	2432	4674
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4678	16.397	NaN	5038.8	30	0	803.23	0.106				-1	 	0	52	428.21891526363817	854.4232775940764	2	428.2193908691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2244	2432	4674
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4679	16.399	NaN	2191.5	30	0	443.28	0.106			+	9436	EKKRLVIVA	9	68	528.3504028320312	NaN	0	528.3504028320312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EKKRLVIVA_	REV__tr|U7SU28|U7SU28_FUSNUGlutamate/gamma-aminobutyrateantiporterOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00994PE=4SV=1	27.882242232435846	0.3367954786602879	4				NaN	NaN	0	NaN	2245	2432	4674
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4680	16.401	NaN	4385.7	30	0	1071.6	0.036			+	23679	LASLLTLTTK	10	59	354.2260856448955	1059.6564275348865	3	354.2267150878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LASLLTLTTK_	REV__ENST00000360057.7_1_7:144320275-144380050:-|nuORF;REV__TPK1|p.L64Cfs*49|1|0.23|ENSG00000196511|chr7:144648874-144648874|A/-|frameshift_variant	32.75053402867276	0.6123771875927935	4				NaN	NaN	0	NaN	2246	2432	4674
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4681	16.401	NaN	4092.5	30	0	521.24	0.143	+			9248	EGVLGQGWDSK	11	59	392.5268752312239	1174.5587962938719	3	392.86285400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EGVLGQGWDSK_	APOBR|p.L868Ffs*2|1|0.24|ENSG00000184730|chr16:28497664-28497664|G/-|frameshift_variant;ENSG00000184730|ENST00000564831|APOBR;nc|ENSG00000184730|Q0VD83-2|APOBR;nc|ENSG00000184730|Q0VD83-3|APOBR	32.03412808689991	0.6537793186749145	4				NaN	NaN	0	NaN	2247	2432	4674
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4699	16.441	NaN	29444	30	0	7799.3	0.195				-1	 	0	75	479.3076701620858	956.6007873909716	2	479.30792236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2262	2435	4698
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4700	16.444	NaN	30656	30	0	6204.7	0.106	+			14718	GTINDISVLRV	11	73	396.2308842234291	1185.6708232704873	3	396.2310791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTINDISVLRV_	ENSG00000266967|ENST00000427569|AARSD1;ENST00000416949.5_1_17:41109156-41116489:-|nuORF;ENST00000441280.7_1_17:41108193-41116457:-|nuORF;nc|ENSG00000266967|Q9BTE6-2|AARSD1;nc|ENSG00000266967|Q9BTE6-3|AARSD1	37.50817390946774	0.5920388381045607	4				NaN	NaN	0	NaN	2263	2435	4698
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4701	16.446	NaN	21138	30	0	5619.1	0.106	+			5257	ATVDKTVCK	9	88	482.7595990938416	963.5046452544832	2	482.760009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATVDKTVCK_	ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1670Tfs*23|1|0.29|ENSG00000174231|chr17:1659487-1659487|C/-|frameshift_variant	164.45504665044191	0.003713414289755139	4				NaN	NaN	0	NaN	2264	2435	4698
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4702	16.448	NaN	40103	30	0	25328	0.106	+			32447	QVITETAKK	9	80	509.2999273887181	1016.5853018442363	2	509.3004150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QVITETAKK_	ENSG00000120675|ENST00000379221|DNAJC15;ENST00000474320.1_1_13:43597726-43652825:+|nuORF	146.78539889680295	0.007618400906539062	4				NaN	NaN	0	NaN	2265	2435	4698
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4703	16.45	NaN	27496	30	0	4630.3	0.106				-1	 	0	85	631.3602552184949	1260.7059575037897	2	631.3613891601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2266	2435	4698
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4704	16.451	NaN	4829.5	30	0	586.47	0.106			+	-1	SSGAQGPPHL	10	66	496.74452337096085	991.4744938087217	2	496.7450256347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SSGAQGPPHL_	REV__ENST00000473223.5_1_1:155187710-155188755:-|nuORF	54.776311868738084	0.41334902933431344	4				NaN	NaN	0	NaN	2267	2435	4698
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4705	16.453	NaN	37566	30	0	10502	0.039				-1	 	0	98	421.2427241552879	1260.7063430660637	3	421.2431335449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2268	2435	4698
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4723	16.491	NaN	26568	30	0	3947.6	0.214	+			2719	AQTGTRWNK	9	99	531.2774925548838	1060.5404321765675	2	531.2783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AQTGTRWNK_	ENSG00000198258|ENST00000586895|UBL5;ENST00000588141.1_1_19:9939136-9939570:+|nuORF;ENST00000588595.5_1_19:9939136-9939352:+|nuORF;ENST00000589372.1_1_19:9939013-9939570:+|nuORF	101.25262130126117	0.03792372629710479	4				NaN	NaN	0	NaN	2283	2438	4722
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4724	16.494	NaN	24822	30	0	6311.7	0.106				-1	NPCLSGGTCY	10	83	376.8202144601899	1127.4388139807697	3	376.82086181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_NPC(Carbamidomethyl (C))LSGGTC(Carbamidomethyl (C))Y_	VCAN|p.N3100S|1|0.24|ENSG00000038427|chr5:83545570-83545570|A/G|missense_variant	29.550750289552195	0.6385079145554603	4				NaN	NaN	0	NaN	2284	2438	4722
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4725	16.496	NaN	21511	30	0	4461.8	0.106			+	2729	AQWCLALSL	9	96	354.52106429500685	NaN	0	354.52105712890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_AQWC(Carbamidomethyl (C))LALSL_	REV__nc|ENSG00000006625|O75223-4|GGCT	56.72105179125745	0.16330365735109603	4				NaN	NaN	0	NaN	2285	2438	4722
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4726	16.498	NaN	5048.6	30	0	677.23	0.106	+			36132	SEKRKQISV	9	75	537.8164245516188	1073.6182961700374	2	537.8174438476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SEKRKQISV_	ENSG00000100994|ENST00000216962|PYGB;PYGB-C20orf152|1|fusion;PYGB-C20orf152|2|fusion;PYGB|p.T677Kfs*4|1|0.44|ENSG00000100994|chr20:25292466-25292466|C/-|frameshift_variant	46.45678178249821	0.34452392205506005	4				NaN	NaN	0	NaN	2286	2438	4722
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4727	16.5	NaN	9911.6	30	0	1014.2	0.106			+	47592	VRQIRGPQK	9	93	361.22478111724354	1080.6525139519306	3	361.2253723144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VRQIRGPQK_	REV__ENSG00000100883|ENST00000216774|SRP54;REV__nc|ENSG00000100883|P61011-2|SRP54	34.172542307311794	0.4838870758800184	4				NaN	NaN	0	NaN	2287	2438	4722
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4728	16.502	NaN	2252.4	30	0	298.7	0.036			+	21065	KKLICLLDE	9	45	358.88006593562295	1073.6183684070688	3	358.8804016113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KKLICLLDE_	REV__TNFSF8|p.R92K|1|0.23|ENSG00000106952|chr9:114905863-114905863|C/T|missense_variant	23.04248740728303	0.5879033540491928	4				NaN	NaN	0	NaN	2288	2438	4722
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4729	16.502	NaN	9355.8	30	0	2221.6	0.142				-1	MGNSHCVPQAP	11	81	578.7464102179896	1155.478267502779	2	578.747314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_M(Oxidation (M))GNSHCVPQAP_	ENSG00000187583|ENST00000379410|PLEKHN1;nc|ENSG00000187583|Q494U1-2|PLEKHN1;nc|ENSG00000187583|Q494U1-3|PLEKHN1;PLEKHN1|p.P235Rfs*25|1|0.16|ENSG00000187583|chr1:970971-970971|G/-|frameshift_variant	47.95952297671804	0.44903247279694136	4				NaN	NaN	0	NaN	2289	2438	4722
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4746	16.54	NaN	128080	30	0	90204	0.197	+			291	AAPEGKRSL	9	74	464.7630403055779	927.5115276779558	2	464.76385498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAPEGKRSL_	ENSG00000255302|ENST00000530028|EID1	70.8162118820467	0.13725933411854815	4				NaN	NaN	0	NaN	2303	2441	4745
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4747	16.544	NaN	63132	30	0	7746.4	0.106	+			35862	SEDKKRPSL	9	97	530.2929737653405	1058.571394597481	2	530.2936401367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEDKKRPSL_	ENSG00000140682|ENST00000394863|TGFB1I1;ENST00000564176.5_1_16:31485144-31486093:+|nuORF;ENST00000567066.6_1_16:31483405-31488894:+|nuORF;ENST00000568142.2_1_16:31484766-31486093:+|nuORF;nc|ENSG00000140682|O43294-2|TGFB1I1	104.0567914643314	0.03506238181059741	4				NaN	NaN	0	NaN	2304	2441	4745
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4748	16.546	NaN	33435	30	0	6027.1	0.106	+			339	AAQAHTREL	9	91	498.76443609767574	NaN	0	498.7644958496094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AAQAHTREL_	ENSG00000103549|ENST00000324685|RNF40;ENST00000493683.5_1_16:30773821-30780773:+|nuORF;nc|ENSG00000103549|O75150-3|RNF40;nc|ENSG00000103549|O75150-4|RNF40	138.06239232086	0.0004957345888817657	4				NaN	NaN	0	NaN	2305	2441	4745
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4749	16.548	NaN	10048	30	0	1869.4	0.106	+			48640	VTSMSTQTK	9	62	491.7466124908492	981.4786720484984	2	491.7471008300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTSMSTQTK_	ENSG00000083937|ENST00000263780|CHMP2B;nc|ENSG00000083937|Q9UQN3-2|CHMP2B	79.48907831485694	0.09975780661107167	4				NaN	NaN	0	NaN	2306	2441	4745
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4750	16.549	NaN	20556	30	0	3806.3	0.106			+	8041	DTVTGRLVQA	10	89	353.8642608892508	1058.5709532679523	3	353.8645324707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DTVTGRLVQA_	REV__ENSG00000164111|ENST00000296511|ANXA5;REV__ENST00000513428.5_1_4:122602814-122617744:-|nuORF	51.33545320467046	0.4446945571623749	4				NaN	NaN	0	NaN	2307	2441	4745
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4751	16.551	NaN	4265.7	30	0	365.35	0.106	+			42653	TAVKHEQEY	9	73	552.7699792431067	NaN	0	552.77001953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TAVKHEQEY_	ENSG00000086598|ENST00000262225|TMED2	106.68306549817024	0.012692596758972883	4				NaN	NaN	0	NaN	2308	2441	4745
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4752	16.553	NaN	8266	30	0	804.43	0.036	+			20117	KEKKVINKL	9	88	550.3631858948646	1098.7118188565291	2	550.3639526367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KEKKVINKL_	ENSG00000106031|ENST00000649031|HOXA13	83.6470233535746	0.08277643980271215	4				NaN	NaN	0	NaN	2309	2441	4745
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4770	16.59	NaN	32732	30	0	5757.2	0.2	+			23010	KVSKELVEK	9	90	530.3235477799427	1058.6325426266853	2	530.3243408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVSKELVEK_	ENSG00000125844|ENST00000377813|RRBP1;nc|ENSG00000125844|Q9P2E9-3|RRBP1;RRBP1|p.A628Gfs*69|1|0.35|ENSG00000125844|chr20:17621915-17621916|-/T|frameshift_variant	150.15188659993407	0.0068337265970353	4				NaN	NaN	0	NaN	2324	2444	4769
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4771	16.593	NaN	17636	30	0	3159.2	0.106				-1	 	0	66	486.26094725960826	970.5073415860165	2	486.26123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2325	2444	4769
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4772	16.595	NaN	6322	30	0	755.38	0.106	+			41878	SVTKTALNK	9	68	481.2868725954632	960.5591922577264	2	481.2872314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVTKTALNK_	ENSG00000187164|ENST00000355371|SHTN1;nc|ENSG00000187164|A0MZ66-3|SHTN1;nc|ENSG00000187164|A0MZ66-4|SHTN1;nc|ENSG00000187164|A0MZ66-5|SHTN1;nc|ENSG00000187164|A0MZ66-6|SHTN1;nc|ENSG00000187164|A0MZ66-7|SHTN1;nc|ENSG00000187164|A0MZ66-8|SHTN1	67.49366992349736	0.1516260258713357	4				NaN	NaN	0	NaN	2326	2444	4769
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4773	16.597	NaN	23494	30	0	7678.3	0.106	+			14508	GTDEHVVCK	9	78	494.2312748661305	986.447996799061	2	494.23162841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTDEHVVCK_	nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM	195.8139193141414	5.102640151833004E-05	4				NaN	NaN	0	NaN	2327	2444	4769
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4774	16.599	NaN	24108	30	0	2995	0.106	+			38412	SSAEYSVHK	9	89	504.2426169250529	1006.4706809169058	2	504.2434997558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSAEYSVHK_	ENSG00000058085|ENST00000264144|LAMC2;LAMC2|p.V488Sfs*24|1|0.32|ENSG00000058085|chr1:183227688-183227688|G/-|frameshift_variant;nc|ENSG00000058085|Q13753-2|LAMC2	200.15690381979954	3.265422741743988E-05	4				NaN	NaN	0	NaN	2328	2444	4769
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4775	16.601	NaN	7925.9	30	0	3926.9	0.106				-1	VSYEIKDMCIK	11	66	467.8962301235782	1400.6668609709347	3	467.89654541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),Oxidation (M)	_VSYEIKDM(Oxidation (M))C(Carbamidomethyl (C))IK_	ENSG00000206530|ENST00000393845|CFAP44;nc|ENSG00000206530|Q96MT7-1|CFAP44	25.125986553469783	0.7262400895305658	4				NaN	NaN	0	NaN	2329	2444	4769
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4776	16.602	NaN	1813.4	30	0	244.12	0.037				-1	LGNCSTTAMKL	11	67	577.7801967605488	1153.5458405878976	2	577.78125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_LGNCSTTAM(Oxidation (M))KL_	ENSG00000113441|ENST00000231368|LNPEP;LNPEP|p.T870Lfs*15|1|0.37|ENSG00000113441|chr5:97024563-97024563|A/-|frameshift_variant;nc|ENSG00000113441|Q9UIQ6-2|LNPEP;nc|ENSG00000113441|Q9UIQ6-3|LNPEP	32.75053402867276	0.6462648045997152	4				NaN	NaN	0	NaN	2330	2444	4769
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4794	16.64	NaN	837710	30	0	106260	0.123	+			38874	SSNSYAIKK	9	99	499.268866940362	996.523180947524	2	499.2700500488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSNSYAIKK_	ENSG00000083845|ENST00000196551|RPS5;ENST00000599232.1_1_19:58906030-58906114:+|nuORF	188.9123650225555	0.0004013498785194686	4				NaN	NaN	0	NaN	2345	2447	4793
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4795	16.642	NaN	39957	30	0	9091.2	0.106	+			36665	SGMGSTVSK	9	81	427.2070039380357	852.3994549428714	2	427.2074890136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SGMGSTVSK_	ENSG00000132383|ENST00000254719|RPA1;RPA1|p.N274Mfs*5|1|0.18|ENSG00000132383|chr17:1879272-1879272|A/-|frameshift_variant	120.30596017624542	0.02101454110788768	4				NaN	NaN	0	NaN	2346	2447	4793
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4796	16.644	NaN	14112	30	0	1378.7	0.106			+	20499	KFDPMVVR	8	79	496.27424443822247	990.533935943245	2	496.2746887207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KFDPMVVR_	REV__ENSG00000178177|ENST00000635767|LCORL	98.62937762414208	0.25143494708580966	4				NaN	NaN	0	NaN	2347	2447	4793
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4797	16.646	NaN	46428	30	0	7325.3	0.106	+			5538	AVAIKAMAK	9	80	459.7750669173902	917.5355809015804	2	459.7752685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_AVAIKAM(Oxidation (M))AK_	EIF5A|p.A145P|1|0.15|ENSG00000132507|chr17:7311608-7311608|G/C|missense_variant;ENSG00000132507|ENST00000336458|EIF5A;ENSG00000253626|ENST00000520547|EIF5AL1;nc|ENSG00000132507|P63241-2|EIF5A	76.7741389293348	0.11149722112137898	4				NaN	NaN	0	NaN	2348	2447	4793
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4798	16.648	NaN	12746	30	0	1863.6	0.106	+			20160	KEKRPPQTL	9	81	548.8266279508647	1095.6387029685293	2	548.827392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEKRPPQTL_	ENSG00000173467|ENST00000310398|AGR3	123.11161354013207	0.019316068184164998	4				NaN	NaN	0	NaN	2349	2447	4793
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4799	16.65	NaN	10132	30	0	1788.2	0.106	+			38947	SSQQSVMSK	9	72	491.2367278629038	980.4589027926077	2	491.2369689941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSQQSVMSK_	ENSG00000173193|ENST00000474629|PARP14;nc|ENSG00000173193|Q460N5-1|PARP14;nc|ENSG00000173193|Q460N5-3|PARP14;nc|ENSG00000173193|Q460N5-4|PARP14;nc|ENSG00000173193|Q460N5-5|PARP14;PARP14|p.N1416Efs*19|1|0.2|ENSG00000173193|chr3:122718388-122718389|-/A|frameshift_variant	142.36107225718385	0.009372392051035914	4				NaN	NaN	0	NaN	2350	2447	4793
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4800	16.651	NaN	10227	30	0	2936.2	0.037				-1	 	0	49	366.22017049014573	1095.6386820706373	3	366.220458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2351	2447	4793
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4801	16.652	NaN	5726.3	30	0	941.2	0.14	+			41998	SVYHISGKK	9	74	509.7873850160579	NaN	0	509.7872619628906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_SVYHISGKK_	ENSG00000113810|ENST00000357388|SMC4;ENST00000468653.5_1_3:160117521-160130242:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4;SMC4|p.D465Efs*32|1|0.12|ENSG00000113810|chr3:160416372-160416373|-/GCATACATCTT|frameshift_variant;SMC4|p.K628Nfs*23|1|0.11|ENSG00000113810|chr3:160420762-160420762|A/-|frameshift_variant	63.42647028704847	0.13470499157941143	4				NaN	NaN	0	NaN	2352	2447	4793
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4819	16.69	NaN	1487800	30	0	312140	0.082			+	13650	GMSWVDGKK	9	87	504.2531607256452	1006.4917685180905	2	504.2537536621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GMSWVDGKK_	REV__ENSG00000162526|ENST00000373534|TSSK3	99.37495909608758	0.03983967222258828	4				NaN	NaN	0	NaN	2367	2450	4818
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4820	16.692	NaN	78727	30	0	14619	0.086	+			39672	STIGETSNR	9	86	482.7376789943281	963.4608050554563	2	482.7383117675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STIGETSNR_	ENST00000556687.5_1_14:23375339-23380602:-|nuORF;nc|ENSG00000100461|Q86U06-2|RBM23;nc|ENSG00000100461|Q86U06-4|RBM23	190.2614974402762	0.00026591377982909756	4				NaN	NaN	0	NaN	2368	2450	4818
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4821	16.693	NaN	150150	30	0	101670	0.106				-1	 	0	64	334.86201776069254	1001.5642238822777	3	334.86260986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2369	2450	4818
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4822	16.695	NaN	39204	30	0	6215.4	0.106	+			21918	KRTTGQAG	8	92	409.7290683989062	NaN	0	409.72967529296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KRTTGQAG_	ENSG00000160957|ENST00000617875|RECQL4;ENST00000534270.1_1_8:145742403-145742869:-|nuORF;ENST00000534538.1_2_8:145741967-145742869:-|nuORF;RECQL4|p.H81Ifs*2|1|0.12|ENSG00000160957|chr8:144517167-144517167|C/-|frameshift_variant;RECQL4|p.Q880Sfs*4|1|0.25|ENSG00000160957|chr8:144512965-144512966|-/G|frameshift_variant	45.9519527083369	1.7418937515398478	4				NaN	NaN	0	NaN	2370	2450	4818
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4823	16.697	NaN	4123	30	0	2383.7	0.106				-1	ATKSCGKIN	9	48	326.83837890625	NaN	0	326.83837890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_ATKSC(Carbamidomethyl (C))GKIN_	ENSG00000134207|ENST00000610222|SYT6;nc|ENSG00000134207|Q5T7P8-2|SYT6	23.52269567125451	0.3573684076213556	4				NaN	NaN	0	NaN	2371	2450	4818
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4824	16.699	NaN	6344.8	30	0	1189.4	0.106	+			16508	HEVDPVRRA	9	70	539.7907045055524	1077.5668560779047	2	539.7921142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HEVDPVRRA_	ENSG00000118971|ENST00000261254|CCND2;nc|ENSG00000118971|P30279-2|CCND2	74.25504064058377	0.12238981753128622	4				NaN	NaN	0	NaN	2372	2450	4818
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4825	16.7	NaN	14292	30	0	1617.1	0.106	+			51289	YSAARSAAA	9	78	434.21907190225215	866.4235908713043	2	434.21954345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YSAARSAAA_	ENSG00000189143|ENST00000340958|CLDN4	68.84614121027924	0.14577793175421136	4				NaN	NaN	0	NaN	2373	2450	4818
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4826	16.702	NaN	306680	30	0	33261	0.034			+	33705	RPEQLAAGV	9	133	470.7633319244156	939.5121109156312	2	470.76416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_RPEQLAAGV_	REV__ENSG00000187714|ENST00000374115|SLC18A3;REV__SLC18A3|p.A20D|1|0.42|ENSG00000187714|chr10:49610799-49610799|C/A|missense_variant	93.19546047674547	0.05585629608842056	4				NaN	NaN	0	NaN	2374	2450	4818
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4844	16.738	NaN	136250	30	0	23389	0.135	+			9161	EGNTDLHEH	9	76	526.2248507384988	1050.4351485437976	2	526.2256469726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EGNTDLHEH_	ENST00000437864.1_1_9:100396806-100398280:-|nuORF	51.33545320467046	0.2872990594074956	4				NaN	NaN	0	NaN	2389	2453	4843
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4845	16.741	NaN	53829	30	0	6284.8	0.106			+	30202	PSPTQIAR	8	97	435.24491549044046	868.475278047681	2	435.2451477050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PSPTQIAR_	REV__ENST00000528737.5_1_11:58912187-58912370:+|nuORF	111.64827973302667	0.24425243057279236	4				NaN	NaN	0	NaN	2390	2453	4843
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4846	16.743	NaN	23874	30	0	2687.8	0.106	+			39223	STAGRVIGK	9	90	444.76600716318666	887.5174613931733	2	444.76629638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STAGRVIGK_	ENSG00000073792|ENST00000382199|IGF2BP2;ENST00000435000.2_1_1:146523764-146523956:+|nuORF;ENST00000440915.1_1_8:100245318-100245837:-|nuORF;ENST00000464166.1_1_3:185364758-185367298:-|nuORF;ENST00000550858.1_1_12:42681771-42682359:+|nuORF;nc|ENSG00000073792|Q9Y6M1-1|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-3|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-4|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-5|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-6|IGF2BP2	88.17693792209575	0.07000514020414955	4				NaN	NaN	0	NaN	2391	2453	4843
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4847	16.745	NaN	39675	30	0	6144.4	0.106	+			14811	GTLGAVHK	8	86	391.7293022756631	781.4440516181262	2	391.7294616699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTLGAVHK_	ENSG00000099785|ENST00000215555|MARCHF2;nc|ENSG00000099785|Q9P0N8-2|MARCHF2	94.00642277110589	0.2653416297186628	4				NaN	NaN	0	NaN	2392	2453	4843
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4848	16.747	NaN	40819	30	0	12116	0.106	+			14060	GSIKGELRK	9	85	494.30013366598615	986.5857143987723	2	494.3003234863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GSIKGELRK_	CHD1|p.E1321Kfs*22|3|0.3|ENSG00000153922|chr5:98870705-98870705|T/-|frameshift_variant;CHD1|p.E1321Rfs*17|1|0.48|ENSG00000153922|chr5:98870704-98870705|-/T|frameshift_variant;CHD1|p.V947Tfs*15|1|0.21|ENSG00000153922|chr5:98882003-98882004|CT/-|frameshift_variant;ENSG00000153922|ENST00000614616|CHD1;nc|ENSG00000153922|O14646-2|CHD1	101.45984612302182	0.0377122763612125	4				NaN	NaN	0	NaN	2393	2453	4843
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4849	16.749	NaN	28523	30	0	18136	0.106	+			1555	AGFRALAQ	8	66	417.2343577007947	832.4541624683894	2	417.234619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AGFRALAQ_	nc|ENSG00000254827|Q8N1D0-2|SLC22A18AS;nc|ENSG00000254827|Q8N1D0|SLC22A18AS	35.200714571348534	0.6875396545722289	4				NaN	NaN	0	NaN	2394	2453	4843
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4850	16.751	NaN	2605.9	30	0	446.03	0.035	+			19563	KCQHQESLG	9	65	515.244158972992	1028.4737650127838	2	515.2444458007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KCQHQESLG_	ENSG00000116691|ENST00000235332|MIIP;ENST00000466860.5_1_1:12082310-12089454:+|nuORF;nc|ENSG00000116691|Q5JXC2-2|MIIP	53.351449002276354	0.2690372970092375	4				NaN	NaN	0	NaN	2395	2453	4843
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4864	16.779	NaN	674100	30	0	183750	0.061				-1	 	0	89	565.8230503999188	1129.6315478666374	2	565.8241577148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2406	2456	4863
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4865	16.78	NaN	1105400	30	0	505340	0.106			+	30891	QEKLDEKKI	9	84	377.55164751458193	1129.6331131439458	3	377.5519104003906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QEKLDEKKI_	REV__ENSG00000136449|ENST00000323776|MYCBPAP;REV__ENST00000470609.5_1_17:48585906-48599496:+|nuORF;REV__nc|ENSG00000136449|Q8TBZ2|MYCBPAP	88.17693792209575	0.07000514020414955	4				NaN	NaN	0	NaN	2407	2456	4863
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4866	16.782	NaN	20045	30	0	7962.7	0.106	+			5602	AVCEKTFKH	9	84	373.85830361137647	1118.5530814343294	3	373.8586120605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_AVC(Carbamidomethyl (C))EKTFKH_	ENSG00000166188|ENST00000299237|ZNF319	47.95952297671804	0.32689736945648856	4				NaN	NaN	0	NaN	2408	2456	4863
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4867	16.784	NaN	12931	30	0	6084	0.106	+			22859	KVKHFMKQH	9	55	400.2223151980104	1197.6451161942312	3	400.2226257324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_KVKHFM(Oxidation (M))KQH_	ACAD11|p.W537Mfs*57|1|0.25|ENSG00000240303|chr3:132603241-132603242|-/T|frameshift_variant;ENSG00000240303|ENST00000264990|ACAD11;ENST00000469042.5_1_3:132298334-132378619:-|nuORF;ENST00000471702.2_2_3:132339980-132400782:-|nuORF;nc|ENSG00000240303|Q709F0-2|ACAD11;nc|ENSG00000240303|Q709F0-3|ACAD11	56.72105179125745	0.24094814563026265	4				NaN	NaN	0	NaN	2409	2456	4863
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4868	16.786	NaN	4931.3	30	0	625.61	0.106				-1	 	0	63	357.72134344015194	713.4281339471039	2	357.7221374511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2410	2456	4863
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4869	16.788	NaN	5220.5	30	0	378.02	0.106	+			35440	SASDVMSHK	9	59	481.22338520389377	960.4322174745876	2	481.2237854003906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SASDVMSHK_	ENSG00000156675|ENST00000330843|RAB11FIP1;nc|ENSG00000156675|Q6WKZ4-2|RAB11FIP1;nc|ENSG00000156675|Q6WKZ4-3|RAB11FIP1;RAB11FIP1|p.E639Rfs*27|1|0.12|ENSG00000156675|chr8:37872887-37872888|-/T|frameshift_variant;RAB11FIP1|p.Q714Tfs*22|1|0.3|ENSG00000156675|chr8:37872662-37872663|-/T|frameshift_variant	47.95952297671804	0.32689736945648856	4				NaN	NaN	0	NaN	2411	2456	4863
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4870	16.79	NaN	10200	30	0	1372.5	0.106			+	31454	QKSYSIGAK	9	72	491.27058139193446	980.5266098506689	2	491.2713928222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QKSYSIGAK_	REV__ENST00000511685.5_2_4:183522223-183549997:+|nuORF	64.20726635412375	0.17854274437659667	4				NaN	NaN	0	NaN	2412	2456	4863
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4871	16.791	NaN	14491	30	0	3883.5	0.034	+			34953	SAAKSLLKK	9	76	473.30764318940896	944.600733445618	2	473.30780029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_SAAKSLLKK_	ENSG00000145349|ENST00000511664|CAMK2D;nc|ENSG00000145349|Q13557-10|CAMK2D;nc|ENSG00000145349|Q13557-11|CAMK2D;nc|ENSG00000145349|Q13557-12|CAMK2D;nc|ENSG00000145349|Q13557-3|CAMK2D;nc|ENSG00000145349|Q13557-4|CAMK2D;nc|ENSG00000145349|Q13557-5|CAMK2D;nc|ENSG00000145349|Q13557-6|CAMK2D;nc|ENSG00000145349|Q13557-8|CAMK2D;nc|ENSG00000145349|Q13557-9|CAMK2D;nc|ENSG00000145349|Q13557|CAMK2D	79.48907831485694	0.09975780661107167	4				NaN	NaN	0	NaN	2413	2456	4863
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4889	16.828	NaN	4160.2	30	0	1861.1	0.214	+			6228	AVRRHSRI	8	38	332.205718194818	993.595325184654	3	332.2062683105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVRRHSRI_	CNTNAP1|p.G828Afs*57|1|0.19|ENSG00000108797|chr17:42691939-42691939|G/-|frameshift_variant;ENSG00000108797|ENST00000264638|CNTNAP1	25.450171626174864	0.7628259754767981	4				NaN	NaN	0	NaN	2428	2459	4888
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4890	16.832	NaN	6078.6	30	0	880.07	0.106			+	30997	QESAPRRR	8	61	500.2757790352171	NaN	0	500.27642822265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QESAPRRR_	REV__ENSG00000167971|ENST00000343516|CASKIN1	85.35947970620816	1.7418937515398478	4				NaN	NaN	0	NaN	2429	2459	4888
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4891	16.834	NaN	7135.8	30	0	1352.2	0.106	+			20556	KFQVTMRGL	9	59	365.8718591344036	NaN	0	365.871826171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_KFQVTM(Oxidation (M))RGL_	ENSG00000177294|ENST00000321535|FBXO39;FBXO39|p.A172Pfs*3|1|0.13|ENSG00000177294|chr17:6780375-6780375|A/-|frameshift_variant	40.05817265558897	0.275207446262312	4				NaN	NaN	0	NaN	2430	2459	4888
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4892	16.836	NaN	11427	30	0	916.36	0.106	+			31148	QGGPLMVIVE	10	86	529.7823353794507	1057.5501178257014	2	529.2823486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_QGGPLM(Oxidation (M))VIVE_	ENSG00000102755|ENST00000282397|FLT1;FLT1|p.L977Efs*2|1|0.31|ENSG00000102755|chr13:28322817-28322818|TT/-|frameshift_variant;nc|ENSG00000102755|P17948-5|FLT1;nc|ENSG00000102755|P17948-6|FLT1	68.78682469695295	0.28723163847957256	4				NaN	NaN	0	NaN	2431	2459	4888
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4893	16.837	NaN	3143.5	30	0	366.95	0.106				-1	 	0	68	497.8051452471007	993.5957375610014	2	497.80560302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2432	2459	4888
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4894	16.839	NaN	6522.2	30	0	637.56	0.036			+	19548	KCHRRWLP	8	75	548.3030556803758	1094.5915584275515	2	548.3045043945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KCHRRWLP_	REV__ENSG00000110429|ENST00000265651|FBXO3;REV__ENST00000526952.1_2_11:33789164-33793404:-|nuORF;REV__ENST00000530013.5_1_11:33775932-33796043:-|nuORF;REV__FBXO3|p.C199Lfs*22|1|0.36|ENSG00000110429|chr11:33755853-33755854|-/A|frameshift_variant;REV__nc|ENSG00000110429|Q9UK99-2|FBXO3;REV__nc|ENSG00000110429|Q9UK99-3|FBXO3	45.9519527083369	0.6193794311207887	4				NaN	NaN	0	NaN	2433	2459	4888
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4895	16.84	NaN	4438.2	30	0	653.72	0.146			+	2952	ASEDAKSLKQL	11	48	397.2192470341073	1188.635911702522	3	397.21929931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASEDAKSLKQL_	REV__ENSG00000144061|ENST00000445609|NPHP1;REV__ENST00000496524.5_1_2:110922048-110962545:-|nuORF;REV__nc|ENSG00000144061|O15259-4|NPHP1;REV__nc|ENSG00000144061|O15259|NPHP1;REV__NPHP1|p.P186Tfs*2|1|0.33|ENSG00000144061|chr2:110168520-110168521|-/T|frameshift_variant	29.550750289552195	0.6798279264880025	4				NaN	NaN	0	NaN	2434	2459	4888
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4910	16.873	NaN	421900	30	0	116170	0.099	+			3031	ASFDKAKLKK	10	89	379.23232394558636	1134.675142436959	3	379.2326965332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASFDKAKLKK_	ENSG00000034510|ENST00000233143|TMSB10	89.02883481214508	0.13663399911061233	4				NaN	NaN	0	NaN	2446	2462	4909
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4911	16.875	NaN	111230	30	0	32690	0.106	+			3032	ASFDKAKLKK	10	89	568.344468309537	1134.6743836858739	2	568.3453979492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASFDKAKLKK_	ENSG00000034510|ENST00000233143|TMSB10	176.59839592901017	0.0015875574101036562	4				NaN	NaN	0	NaN	2447	2462	4909
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4912	16.877	NaN	29001	30	0	13982	0.106				-1	 	0	66	406.20035628760434	810.3861596420087	2	406.2008056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2448	2462	4909
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4913	16.879	NaN	12073	30	0	2095.6	0.106	+			5042	ATSGGSAEQIK	11	81	524.766472588715	1047.51839224423	2	524.767333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATSGGSAEQIK_	ENSG00000114030|ENST00000344337|KPNA1	117.7056744995986	0.02459125945945966	4				NaN	NaN	0	NaN	2449	2462	4909
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4914	16.88	NaN	33322	30	0	3676	0.106			+	13314	GKGWCRPAAL	10	92	529.7823353794507	1057.5501178257014	2	529.783447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GKGWCRPAAL_	REV__ENST00000486818.5_1_7:72951459-72951579:-|nuORF	66.42927471994793	0.3073667423445326	4				NaN	NaN	0	NaN	2450	2462	4909
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4915	16.882	NaN	13300	30	0	2990.7	0.106	+			20712	KGRVKKGHAH	10	72	373.22886664765747	1116.6647705431724	3	373.2293701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KGRVKKGHAH_	ENSG00000157423|ENST00000393567|HYDIN;HYDIN|p.E2653Kfs*4|1|0.27|ENSG00000157423|chr16:70918259-70918259|T/-|frameshift_variant;HYDIN|p.F4256Vfs*111|1|0.27|ENSG00000157423|chr16:70849833-70849834|-/C|frameshift_variant;HYDIN|p.I1986Nfs*6|1|0.45|ENSG00000157423|chr16:70961970-70961971|-/T|frameshift_variant;HYDIN|p.R1703Lfs*51|1|0.5|ENSG00000157423|chr16:70973950-70973951|-/GA|frameshift_variant;HYDIN|p.V3416Gfs*64|1|0.15|ENSG00000157423|chr16:70879725-70879726|-/ACTCC|frameshift_variant;nc|ENSG00000157423|Q4G0P3-5|HYDIN	27.047317107675042	0.6589519614906109	4				NaN	NaN	0	NaN	2451	2462	4909
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4916	16.884	NaN	9379.2	30	0	1117.5	0.106	+			39974	STMKTMEDK	9	73	535.7457195147061	1069.4768860962122	2	535.7468872070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STMKTMEDK_	EAPP|p.F278Sfs*4|1|0.34|ENSG00000129518|chr14:34516335-34516335|A/-|frameshift_variant;ENSG00000129518|ENST00000250454|EAPP;ENST00000555683.1_1_14:35005207-35008876:-|nuORF	143.37361013837676	0.008897369944672323	4				NaN	NaN	0	NaN	2452	2462	4909
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4917	16.886	NaN	3471.4	30	0	322.87	0.036			+	23827	LCTFLPRQN	9	68	546.2877988889594	1090.5610448447187	2	546.2887573242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_LCTFLPRQN_	REV__SVA_D_dup628|chr7:140430960-140432406:+|1.004965212380795|0.4952733165024275|1.02|477.0|40|3|sense	60.11826168202944	0.21262886028301267	4				NaN	NaN	0	NaN	2453	2462	4909
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4935	16.923	NaN	62567	30	0	10457	0.214				-1	 	0	94	497.27134672307443	992.5281405129489	2	497.2716979980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2468	2465	4934
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4936	16.927	NaN	13893	30	0	2969.5	0.106	+			38290	SQQSKKVW	8	65	330.84987465690983	989.5277945709295	3	330.8504333496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SQQSKKVW_	nc|ENSG00000026508|P16070-19|CD44	47.91560031466742	0.6071945918984287	4				NaN	NaN	0	NaN	2469	2465	4934
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4937	16.929	NaN	16208	30	0	1168.9	0.106	+			41420	SVNERIENK	9	95	544.7876197491679	1087.5606865651357	2	544.7884521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVNERIENK_	ENSG00000114054|ENST00000251654|PCCB;nc|ENSG00000114054|P05166-2|PCCB;PCCB|p.A153Lfs*3|1|0.38|ENSG00000114054|chr3:136261975-136261975|G/-|frameshift_variant	78.26377905018397	0.10505600812668463	4				NaN	NaN	0	NaN	2470	2465	4934
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4938	16.931	NaN	20574	30	0	2345.7	0.106	+			3493	ASSHVPIQK	9	96	483.77151359776633	965.5284742623327	2	483.7718811035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASSHVPIQK_	ENSG00000158290|ENST00000371322|CUL4B;nc|ENSG00000158290|Q13620|CUL4B	76.16968421966216	0.11411088698345859	4				NaN	NaN	0	NaN	2471	2465	4934
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4939	16.932	NaN	7187.8	30	0	1123	0.106			+	31591	QLSTVIGAK	9	73	458.7761697995075	915.537786665815	2	458.7767028808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QLSTVIGAK_	REV__ENSG00000073111|ENST00000265056|MCM2;REV__ENST00000473785.1_1_3:127335898-127336307:+|nuORF;REV__ENST00000474964.5_1_3:127323572-127340613:+|nuORF;REV__ENST00000477668.5_1_3:127323572-127337961:+|nuORF	71.87747018426188	0.13267044672804276	4				NaN	NaN	0	NaN	2472	2465	4934
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4940	16.934	NaN	3877.1	30	0	482.69	0.038	+			34516	RVGEFCHNR	9	68	392.1891055734516	1173.545487320555	3	392.1893310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_RVGEFC(Carbamidomethyl (C))HNR_	ENSG00000130985|ENST00000335972|UBA1;nc|ENSG00000130985|P22314-2|UBA1	58.2462437865262	0.22823408064396822	4				NaN	NaN	0	NaN	2473	2465	4934
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4941	16.935	NaN	5411.4	30	0	576.66	0.139	+			12397	GEAARTSTM	9	65	462.2157668726682	922.4169808121364	2	462.2160339355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GEAARTSTM_	ENSG00000120690|ENST00000239882|ELF1;nc|ENSG00000120690|P32519-2|ELF1	98.58198989935565	0.04066992115528678	4				NaN	NaN	0	NaN	2474	2465	4934
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4959	16.974	NaN	240970	30	0	58445	0.129				-1	 	0	100	573.2854136759537	1144.5562744187073	2	573.2865600585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2489	2468	4958
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4960	16.976	NaN	153160	30	0	48794	0.106				-1	 	0	80	486.7844216563179	971.5542903794358	2	486.78466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2490	2468	4958
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4961	16.979	NaN	230660	30	0	80770	0.106				-1	 	0	133	324.85849766680457	971.5536636006137	3	324.8590393066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2491	2468	4958
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4962	16.98	NaN	87219	30	0	43939	0.106			+	-1	MREWCLQGPMA	11	86	697.8043108406413	1393.5940687480825	2	697.8060302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))REWC(Carbamidomethyl (C))LQGPMA_	REV__ENST00000246194.7_1_20:32659989-32661416:+|nuORF	41.42661286455405	0.5384226294179143	4				NaN	NaN	0	NaN	2492	2468	4958
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4963	16.982	NaN	18065	30	0	3131.2	0.106			+	11662	FQPERPDAQ	9	78	544.2627734960449	1086.5109940588898	2	544.2639770507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FQPERPDAQ_	REV__DENND5A|p.K895Sfs*7|2|0.23|ENSG00000184014|chr11:9150132-9150132|T/-|frameshift_variant;REV__DENND5A|p.L896Vfs*14|1|0.2|ENSG00000184014|chr11:9150131-9150132|-/T|frameshift_variant;REV__ENSG00000184014|ENST00000328194|DENND5A;REV__ENST00000532696.1_1_11:9225120-9228222:-|nuORF;REV__nc|ENSG00000184014|Q6IQ26-2|DENND5A	64.20726635412375	0.17854274437659667	4				NaN	NaN	0	NaN	2493	2468	4958
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4964	16.984	NaN	40325	30	0	13641	0.106				-1	LKCNPVQRI	9	73	376.55158951034184	NaN	0	376.523193359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_LKC(Carbamidomethyl (C))NPVQRI_	ENSG00000164885|ENST00000485972|CDK5;nc|ENSG00000164885|Q00535-2|CDK5	47.657333605630114	0.2228375344433429	4				NaN	NaN	0	NaN	2494	2468	4958
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4965	16.986	NaN	5232.5	30	0	1307.5	0.035	+			47876	VSLGRYTPT	9	55	331.8504542666128	NaN	0	331.85040283203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VSLGRYTPT_	ABLIM2|p.D469Mfs*94|1|0.32|ENSG00000163995|chr4:8008170-8008170|C/-|frameshift_variant;ABLIM2|p.S399Afs*29|1|0.08|ENSG00000163995|chr4:8020278-8020278|G/-|frameshift_variant;ENSG00000163995|ENST00000447017|ABLIM2;nc|ENSG00000163995|Q6H8Q1-2|ABLIM2;nc|ENSG00000163995|Q6H8Q1-3|ABLIM2;nc|ENSG00000163995|Q6H8Q1-4|ABLIM2;nc|ENSG00000163995|Q6H8Q1-5|ABLIM2;nc|ENSG00000163995|Q6H8Q1-6|ABLIM2;nc|ENSG00000163995|Q6H8Q1-7|ABLIM2;nc|ENSG00000163995|Q6H8Q1-8|ABLIM2;nc|ENSG00000163995|Q6H8Q1|ABLIM2	24.20275056022122	0.35506675290109213	4				NaN	NaN	0	NaN	2495	2468	4958
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4983	17.023	NaN	9429.8	30	0	1678.7	0.214	+			14630	GTGNMEIKK	9	65	489.25704806885676	976.4995432045135	2	489.2575378417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTGNMEIKK_	ENSG00000138496|ENST00000682323|PARP9;nc|ENSG00000138496|Q8IXQ6-3|PARP9;nc|ENSG00000138496|Q8IXQ6|PARP9;PARP9|p.T633Pfs*5|2|0.22|ENSG00000138496|chr3:122537047-122537047|T/-|frameshift_variant	120.30596017624542	0.02101454110788768	4				NaN	NaN	0	NaN	2510	2471	4982
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4984	17.027	NaN	23117	30	0	5429.5	0.106	+			22715	KVAPAPAVVKK	11	85	369.9127784531348	1106.7165059596045	3	369.9130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVAPAPAVVKK_	ENSG00000148303|ENST00000323345|RPL7A;ENST00000424041.1_1_20:36073469-36073910:-|nuORF;ENST00000463740.5_1_9:136215098-136217195:+|nuORF	183.72194652814687	5.7103426921105755E-06	4				NaN	NaN	0	NaN	2511	2471	4982
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4985	17.029	NaN	33721	30	0	5293.2	0.106			+	49974	WAFQIPAGL	9	91	501.77430116942384	1001.5340494056477	2	502.2753601074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_WAFQIPAGL_	REV__ENSG00000157796|ENST00000399820|WDR19;REV__ENST00000502389.1_1_4:39184171-39196284:+|nuORF;REV__nc|ENSG00000157796|Q8NEZ3-2|WDR19;REV__WDR19|p.L214Ffs*2|1|0.19|ENSG00000157796|chr4:39205183-39205184|-/TT|frameshift_variant;REV__WDR19|p.L214Ffs*5|2|0.34|ENSG00000157796|chr4:39205183-39205184|-/T|frameshift_variant;REV__WDR19|p.N1166Mfs*5|1|0.21|ENSG00000157796|chr4:39272989-39272989|A/-|frameshift_variant;REV__WDR19|p.T24Nfs*12|1|0.35|ENSG00000157796|chr4:39185783-39185784|-/A|frameshift_variant	54.776311868738084	0.25715957988447635	4				NaN	NaN	0	NaN	2512	2471	4982
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4986	17.031	NaN	13174	30	0	1501.6	0.106				-1	 	0	83	554.3653787182072	1106.7162045032144	2	554.3663330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2513	2471	4982
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4987	17.033	NaN	6269.9	30	0	766.12	0.106	+			47978	VSPGQTARI	9	62	464.7630403055779	927.5115276779558	2	465.2559814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSPGQTARI_	nc|ENSG00000211658|P01718|IGLV3-27;nc|ENSG00000211659|P01717|IGLV3-25;nc|ENSG00000211661|A0A075B6J6|IGLV3-22;nc|ENSG00000211669|A0A075B6K4|IGLV3-10	49.536043120802724	0.308405419312776	4				NaN	NaN	0	NaN	2514	2471	4982
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4988	17.034	NaN	2550.2	30	0	683.94	0.036	+			41888	SVTRVVVHK	9	37	342.21354754854354	NaN	0	342.21356201171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVTRVVVHK_	ENSG00000079819|ENST00000337057|EPB41L2;ENST00000368126.2_1_6:131179278-131186801:-|nuORF;ENST00000452150.6_1_6:131179278-131188835:-|nuORF;nc|ENSG00000079819|O43491-2|EPB41L2;nc|ENSG00000079819|O43491-3|EPB41L2;nc|ENSG00000079819|O43491-4|EPB41L2	21.9598887501803	0.3626577482100488	4				NaN	NaN	0	NaN	2515	2471	4982
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4989	17.035	NaN	4427.1	30	0	508.56	0.138			+	12108	GAEECHLK	8	68	443.7078990400583	NaN	0	443.7893371582031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GAEECHLK_	REV__ENST00000355540.7_1_7:98529083-98530886:+|nuORF	40.5726180659479	1.7418937515398478	4				NaN	NaN	0	NaN	2516	2471	4982
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5007	17.074	NaN	31325	30	0	5722.1	0.214				-1	 	0	70	322.84987909650874	965.5278078897263	3	322.8503723144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2531	2474	5006
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5008	17.078	NaN	58422	30	0	18694	0.106			+	32115	QSKALDWDIT	10	86	588.7982482546134	1175.5819435760268	2	588.7991333007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QSKALDWDIT_	REV__ENST00000395395.6_1_9:97062480-97062831:+|nuORF	86.88156770896713	0.14892753630261096	4				NaN	NaN	0	NaN	2532	2474	5006
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5009	17.08	NaN	6521.7	30	0	762.87	0.106			+	9462	EKNQVTNVA	9	73	501.7645154032786	NaN	0	501.77667236328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EKNQVTNVA_	REV__DNA2|p.L697Ffs*28|1|0.35|ENSG00000138346|chr10:68430553-68430554|-/A|frameshift_variant;REV__ENSG00000138346|ENST00000358410|DNA2;REV__nc|ENSG00000138346|P51530-2|DNA2;REV__nc|ENSG00000138346|P51530-3|DNA2;REV__nc|ENSG00000138346|P51530-4|DNA2	69.6276240434122	0.10825701912424071	4				NaN	NaN	0	NaN	2533	2474	5006
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5010	17.081	NaN	15970	30	0	3322.7	0.106				-1	 	0	79	448.21083651235335	894.4071200915067	2	448.2110290527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2534	2474	5006
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5011	17.083	NaN	10805	30	0	1485.5	0.106				-1	 	0	54	332.6737194232289	663.3328859132578	2	332.6741943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2535	2474	5006
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5012	17.085	NaN	9586	30	0	3724	0.036				-1	KIPDLFCGL	9	58	354.8603604356279	1061.5592519070838	3	354.86114501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_KIPDLFC(Carbamidomethyl (C))GL_	ENSG00000167363|ENST00000300784|FN3K;FN3K|p.F255Sfs*32|1|0.24|ENSG00000167363|chr17:82750582-82750582|G/-|frameshift_variant	31.529811441608018	0.5085848003137583	4				NaN	NaN	0	NaN	2536	2474	5006
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5013	17.086	NaN	17300	30	0	3170.3	0.143	+			38257	SQNPRFYHK	9	77	392.8682884238739	1175.5830358718217	3	392.86834716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SQNPRFYHK_	ENSG00000132522|ENST00000380728|GPS2;ENST00000571697.5_1_17:7216077-7216449:-|nuORF;ENST00000573807.5_1_17:7216077-7216773:-|nuORF;ENST00000574458.1_1_17:7216077-7216212:-|nuORF	77.31757898189308	0.1091473830098891	4				NaN	NaN	0	NaN	2537	2474	5006
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5031	17.125	NaN	36819	30	0	6983	0.214				-1	 	0	97	485.7653072149159	969.5160614966318	2	485.765869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2552	2477	5030
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5032	17.129	NaN	13873	30	0	4179.1	0.106				-1	 	0	78	475.74241562472696	949.4702783162539	2	475.74267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2553	2477	5030
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5033	17.131	NaN	34665	30	0	5983	0.106			+	43545	THGPDRSRR	9	85	541.2845567275427	1080.5545605218854	2	541.2858276367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_THGPDRSRR_	REV__ENST00000440097.5_1_3:45636669-45636975:+|nuORF	59.93077597824379	0.21419174904018318	4				NaN	NaN	0	NaN	2554	2477	5030
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5034	17.133	NaN	6957.5	30	0	1033.9	0.106	+			45018	TVFKNGKVTK	10	71	561.3368055763773	1120.6590582195545	2	561.3377075195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TVFKNGKVTK_	ENSG00000105835|ENST00000222553|NAMPT;ENST00000440465.1_1_10:36811746-36813066:-|nuORF	104.42354056486148	0.06456012287859861	4				NaN	NaN	0	NaN	2555	2477	5030
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5035	17.134	NaN	10413	30	0	984.69	0.106	+			6894	CLQCRKPTI	9	76	531.2829753030148	NaN	0	531.2832641601562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_CLQCRKPTI_	ENST00000504719.6_1_8:128806950-128867457:+|nuORF;ENST00000524165.5_1_8:128808194-128867457:+|nuORF	79.45101966838831	0.07326487554222888	4				NaN	NaN	0	NaN	2556	2477	5030
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5036	17.136	NaN	33573	30	0	4607.9	0.035				-1	 	0	84	499.2322934984676	996.4500340637352	2	499.232666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2557	2477	5030
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5037	17.137	NaN	19263	30	0	3193	0.139	+			14369	GTAEPGGSMK	10	80	467.71781017405095	933.4210674149019	2	467.7182312011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GTAEPGGSMK_	ENSG00000183963|ENST00000333137|SMTN;ENST00000460658.5_1_22:31484094-31491444:+|nuORF;ENST00000489337.5_1_22:31484532-31494796:+|nuORF;nc|ENSG00000183963|P53814-6|SMTN;nc|ENSG00000183963|P53814|SMTN;SMTN|p.S536Vfs*33|1|0.33|ENSG00000183963|chr22:31091813-31091813|C/-|frameshift_variant	41.42661286455405	0.5359995577334734	4				NaN	NaN	0	NaN	2558	2477	5030
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5055	17.176	NaN	16751	30	0	5034.7	0.214				-1	 	0	82	361.19219511902054	1080.5547559572617	3	361.1926574707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2573	2480	5054
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5056	17.18	NaN	7029.7	30	0	2803.1	0.106				-1	 	0	56	417.2394206083041	832.4642882834082	2	417.23980712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2574	2480	5054
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5057	17.182	NaN	8811.2	30	0	1518.2	0.106				-1	 	0	68	400.71279561561965	799.4110382980393	2	400.7132873535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2575	2480	5054
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5058	17.183	NaN	9754.7	30	0	918.87	0.106	+			43239	TEVRQKQQL	9	80	565.3199786501257	NaN	0	565.3198852539062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TEVRQKQQL_	ENSG00000133106|ENST00000313624|EPSTI1;EPSTI1|p.L289Sfs*24|1|0.42|ENSG00000133106|chr13:42895092-42895093|-/A|frameshift_variant;EPSTI1|p.R138Efs*5|1|0.36|ENSG00000133106|chr13:42963332-42963332|T/-|frameshift_variant;nc|ENSG00000133106|Q96J88-3|EPSTI1;nc|ENSG00000133106|Q96J88|EPSTI1	110.11987700582712	0.00958887139988123	4				NaN	NaN	0	NaN	2576	2480	5054
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5059	17.185	NaN	3870.4	30	0	859.29	0.106				-1	 	0	66	559.3028682199815	1116.591183506763	2	559.3038330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2577	2480	5054
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5060	17.187	NaN	5977.5	30	0	2779.8	0.036	+			22415	KTKKVVESK	9	52	349.5565865316536	1045.6479301951608	3	349.5570068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KTKKVVESK_	ENSG00000198900|ENST00000361337|TOP1	42.86426827375447	0.38666266728046506	4				NaN	NaN	0	NaN	2578	2480	5054
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5061	17.188	NaN	11046	30	0	4069.3	0.141	+			37205	SKEVKKPSH	9	61	347.20077529902693	1038.5804964972808	3	347.2012634277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SKEVKKPSH_	ENSG00000197563|ENST00000640252|PIGN	32.81241826257853	0.4965981579233955	4				NaN	NaN	0	NaN	2579	2480	5054
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5079	17.227	NaN	25527	30	0	3432.5	0.214				-1	 	0	86	543.7980461783703	1085.5815394235406	2	543.7991333007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2594	2483	5078
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5080	17.231	NaN	70670	30	0	16446	0.106	+			35157	SAIDKMTKK	9	98	511.2893306482249	NaN	0	511.289306640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAIDKMTKK_	CTNNA1|p.K493Nfs*31|1|0.19|ENSG00000044115|chr5:138917827-138917827|A/-|frameshift_variant;CTNNA1|p.T832*|1|0.29|ENSG00000044115|chr5:138933859-138933862|CAGA/-|frameshift_variant;ENSG00000044115|ENST00000302763|CTNNA1;ENST00000515849.2_1_5:114726864-114727050:-|nuORF;ENST00000517534.5_1_5:138163374-138223382:+|nuORF;nc|ENSG00000044115|P35221-2|CTNNA1	152.06079943815163	0.0040106280661235455	4				NaN	NaN	0	NaN	2595	2483	5078
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5081	17.233	NaN	28106	30	0	7080.9	0.106				-1	 	0	63	413.1899718491796	824.3653907651592	2	413.1903991699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2596	2483	5078
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5082	17.234	NaN	35246	30	0	7521.1	0.106	+			20092	KEKISDTQ	8	86	474.7527213640354	947.4908897948708	2	474.753173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEKISDTQ_	ENSG00000165807|ENST00000298705|PPP1R36	84.9155231211612	0.2928622555056503	4				NaN	NaN	0	NaN	2597	2483	5078
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5083	17.236	NaN	7541	30	0	2033.6	0.106	+			27846	MTAEEMKATE	10	63	570.7486131575038	1139.4826733818074	2	570.7498168945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MTAEEMKATE_	ENSG00000004478|ENST00000001008|FKBP4	40.05817265558897	0.5486090488315611	4				NaN	NaN	0	NaN	2598	2483	5078
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5084	17.238	NaN	14264	30	0	3569.9	0.035				-1	 	0	64	329.507214718362	985.499814755286	3	329.50775146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2599	2483	5078
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5085	17.239	NaN	5455	30	0	1766.3	0.138	+			1327	AETGSGKTL	9	63	432.2264556256135	862.438358318027	2	432.2269287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AETGSGKTL_	DDX24|p.S507Ffs*17|1|0.26|ENSG00000089737|chr14:94060491-94060492|-/A|frameshift_variant;ENSG00000089737|ENST00000621632|DDX24;ENSG00000182810|ENST00000332395|DDX28;ENST00000555762.1_1_14:94524146-94547480:-|nuORF;nc|ENSG00000089737|Q9GZR7-2|DDX24	43.650786325866115	0.37743712540499297	4				NaN	NaN	0	NaN	2600	2483	5078
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5103	17.278	NaN	36932	30	0	7736.5	0.214			+	-1	VSLLMDDM	8	78	478.20885876300326	954.4031645928065	2	478.20916748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_VSLLM(Oxidation (M))DDM(Oxidation (M))_	REV__ENSG00000237521|ENST00000456448|OR7E24;REV__OR7E24|p.F168Lfs*12|2|0.36|ENSG00000237521|chr19:9251541-9251541|T/-|frameshift_variant;REV__OR7E24|p.L148Cfs*7|1|0.26|ENSG00000237521|chr19:9251481-9251481|C/-|frameshift_variant	52.29916861842294	0.578018602984656	4				NaN	NaN	0	NaN	2615	2486	5102
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5104	17.282	NaN	70230	30	0	11978	0.106	+			11954	FVKHSCGGK	9	85	481.74797225225467	961.4813915713094	2	481.7484436035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FVKHSCGGK_	ENST00000535011.6_1_7:128409877-128409916:+|nuORF	71.87747018426188	0.13267044672804276	4				NaN	NaN	0	NaN	2616	2486	5102
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5105	17.284	NaN	33535	30	0	8323.7	0.106				-1	 	0	90	364.21289569320743	1089.6168576798223	3	364.2132873535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2617	2486	5102
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5106	17.285	NaN	8435.3	30	0	964.52	0.106	+			13748	GQCPMRVQK	9	87	552.2751468086667	1102.5357406841333	2	552.2763061523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_GQC(Carbamidomethyl (C))PMRVQK_	ENSG00000165475|ENST00000298248|CRYL1;nc|ENSG00000165475|Q9Y2S2-2|CRYL1	87.75429964447693	0.0711966946989736	4				NaN	NaN	0	NaN	2618	2486	5102
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5107	17.287	NaN	6368	30	0	642.61	0.106	+			22776	KVFDAKPSAK	10	70	545.8157334851201	1089.61691403704	2	545.8169555664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KVFDAKPSAK_	ENSG00000143889|ENST00000449105|HNRNPLL;nc|ENSG00000143889|Q8WVV9-4|HNRNPLL;nc|ENSG00000143889|Q8WVV9-5|HNRNPLL	65.69465075029274	0.3140480584506322	4				NaN	NaN	0	NaN	2619	2486	5102
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5108	17.289	NaN	3903.8	30	0	698.2	0.036	+			10028	ERVLRDLR	8	67	528.8169653195689	1055.6193777059377	2	528.8176879882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ERVLRDLR_	ACADVL|p.F461*|1|0.27|ENSG00000072778|chr17:7224016-7224017|TT/-|frameshift_variant;ENSG00000072778|ENST00000356839|ACADVL;ENST00000583850.5_1_17:7127146-7127844:+|nuORF;nc|ENSG00000072778|P49748-2|ACADVL;nc|ENSG00000072778|P49748-3|ACADVL	39.252832667884924	0.6609488554722044	4				NaN	NaN	0	NaN	2620	2486	5102
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5109	17.29	NaN	6475.3	30	0	412.24	0.141	+			39343	STCGKCGYPAK	11	71	557.7539404533314	1113.4933279734628	2	557.755126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STCGKCGYPAK_	ENSG00000145592|ENST00000274242|RPL37;ENST00000504562.1_1_5:40832608-40835123:-|nuORF;ENST00000507642.5_1_5:40832592-40834660:-|nuORF	89.02883481214508	0.10275031849113642	4				NaN	NaN	0	NaN	2621	2486	5102
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5127	17.328	NaN	762440	30	0	126610	0.193	+			41431	SVNGKVLSK	9	142	466.28156558436575	930.5485782355315	2	466.2819519042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVNGKVLSK_	ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2;NOMO1|p.P1102Hfs*42|1|0.36|ENSG00000103512|chr16:14886838-14886838|C/-|frameshift_variant;NOMO1|p.P141Sfs*12|1|0.33|ENSG00000103512|chr16:14846592-14846593|-/AG|frameshift_variant	136.5150327860613	0.012115003498012726	4				NaN	NaN	0	NaN	2636	2489	5126
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5128	17.331	NaN	33203	30	0	11339	0.106	+			387	AASEAGRAM	9	95	432.20552576472403	NaN	0	432.2055358886719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AASEAGRAM_	ENSG00000071859|ENST00000393600|FAM50A	77.31757898189308	0.08057531075035683	4				NaN	NaN	0	NaN	2637	2489	5126
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5129	17.333	NaN	27353	30	0	3470.2	0.106	+			42451	TAMAAAKAPTK	11	83	530.7934477415082	1059.5723425498163	2	530.7949829101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TAMAAAKAPTK_	ENSG00000114391|ENST00000394077|RPL24	205.12087461578943	8.611177169029147E-09	4				NaN	NaN	0	NaN	2638	2489	5126
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5130	17.335	NaN	4137.2	30	0	443.51	0.106			+	-1	EMVEVVSQAMR	11	75	655.8076171875	NaN	0	655.8076171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Oxidation (M)	_EM(Oxidation (M))VEVVSQAM(Oxidation (M))R_	REV__ENSG00000143882|ENST00000272238|ATP6V1C2;REV__nc|ENSG00000143882|Q8NEY4-2|ATP6V1C2	63.53385203322761	0.1989067641070983	4				NaN	NaN	0	NaN	2639	2489	5126
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5131	17.337	NaN	7110.9	30	0	857.89	0.106			+	49123	VVLQRMCGA	9	83	517.268164455438	1032.5217759776758	2	517.2877197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_VVLQRMC(Carbamidomethyl (C))GA_	REV__ENSG00000154358|ENST00000680850|OBSCN;REV__nc|ENSG00000154358|Q5VST9-2|OBSCN;REV__nc|ENSG00000154358|Q5VST9-3|OBSCN;REV__nc|ENSG00000154358|Q5VST9-5|OBSCN;REV__nc|ENSG00000154358|Q5VST9-6|OBSCN;REV__nc|ENSG00000154358|Q5VST9|OBSCN;REV__OBSCN|p.E4688Dfs*35|1|0.03|ENSG00000154358|chr1:228318105-228318106|-/CATCTTC|frameshift_variant;REV__OBSCN|p.E4729Rfs*7|1|0.37|ENSG00000154358|chr1:228318930-228318931|-/C|frameshift_variant;REV__OBSCN|p.G1702Vfs*37|2|0.36|ENSG00000154358|chr1:228268769-228268769|G/-|frameshift_variant;REV__OBSCN|p.H7050Tfs*22|1|0.11|ENSG00000154358|chr1:228371922-228371922|C/-|frameshift_variant;REV__OBSCN|p.P6994Lfs*78|1|0.15|ENSG00000154358|chr1:228371756-228371756|C/-|frameshift_variant;REV__OBSCN|p.S5232Ffs*24|1|0.21|ENSG00000154358|chr1:228332900-228332901|-/T|frameshift_variant;REV__OBSCN|p.V3709Sfs*15|1|0.03|ENSG00000154358|chr1:228293609-228293610|-/A|frameshift_variant	63.30626980617807	0.18605348971131092	4				NaN	NaN	0	NaN	2640	2489	5126
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5132	17.339	NaN	4676.8	30	0	691.5	0.106			+	-1	LSRQNPLLM	9	61	363.20123291015625	NaN	0	363.20123291015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_LSRQNPLLM(Oxidation (M))_	REV__ENST00000461019.5_1_7:149567380-149567437:-|nuORF	27.047317107675042	0.34101084205454363	4				NaN	NaN	0	NaN	2641	2489	5126
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5133	17.341	NaN	1880.5	30	0	176.64	0.037	+			20941	KKAYEQAKGK	10	65	575.833251953125	NaN	0	575.833251953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KKAYEQAKGK_	ENSG00000183091|ENST00000397345|NEB;nc|ENSG00000183091|P20929-1|NEB;nc|ENSG00000183091|P20929-3|NEB;nc|ENSG00000183091|P20929-4|NEB;NEB|p.L4198Cfs*51|1|0.35|ENSG00000183091|chr2:151568357-151568357|G/-|frameshift_variant;NEB|p.N3442Tfs*4|1|0.2|ENSG00000183091|chr2:151618297-151618297|T/-|frameshift_variant	63.42647028704847	0.20629711391763655	4				NaN	NaN	0	NaN	2642	2489	5126
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5168	17.415	NaN	69026	30	0	18659	0.214				-1	 	0	91	453.74753032439753	905.4805077155951	2	453.7479553222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2671	2495	5167
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5169	17.418	NaN	27666	30	0	4978.7	0.106			+	26290	LSTVKVEPLQ	10	88	371.88960136035536	1112.646974681266	3	371.89013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSTVKVEPLQ_	REV__ENSG00000188770|ENST00000367222|OPTC	44.377184641726394	0.5088115166961078	4				NaN	NaN	0	NaN	2672	2495	5167
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5170	17.42	NaN	14286	30	0	2516.9	0.106	+			35010	SACHKYFEK	9	89	390.5181619991291	1168.5326565975874	3	390.5184020996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SAC(Carbamidomethyl (C))HKYFEK_	ENSG00000163993|ENST00000296370|S100P;ENST00000513778.1_1_4:6695618-6698766:+|nuORF;S100P|p.T82M|1|0.3|ENSG00000163993|chr4:6696999-6696999|C/T|missense_variant	99.01295224348159	0.040209060045561164	4				NaN	NaN	0	NaN	2673	2495	5167
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5171	17.422	NaN	42497	30	0	15621	0.106	+			40374	STTTTQITK	9	84	490.7660934021398	979.5176338710796	2	490.76629638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STTTTQITK_	ENSG00000159023|ENST00000343067|EPB41;ENST00000462032.1_1_1:29424324-29436027:+|nuORF;nc|ENSG00000159023|P11171-2|EPB41;nc|ENSG00000159023|P11171-3|EPB41;nc|ENSG00000159023|P11171-5|EPB41;nc|ENSG00000159023|P11171-6|EPB41	176.44474024533739	0.0016668318535579616	4				NaN	NaN	0	NaN	2674	2495	5167
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5172	17.424	NaN	12999	30	0	4169.4	0.106				-1	 	0	69	444.7424160158209	887.4702790984418	2	444.7426452636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2675	2495	5167
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5173	17.425	NaN	15715	30	0	6734.2	0.035				-1	 	0	64	326.53401128360275	976.5802044510083	3	326.53448486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2676	2495	5167
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5174	17.426	NaN	5598	30	0	544.73	0.139				-1	 	0	75	471.29192750386665	940.5693020745333	2	471.292236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2677	2495	5167
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5189	17.46	NaN	74536	30	0	31092	0.214	+			30546	QAKQESTEY	9	90	542.2505035635855	1082.486454193971	2	542.2515869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QAKQESTEY_	ENSG00000026025|ENST00000544301|VIM;ENST00000421459.2_2_10:17272631-17276850:+|nuORF;VIM|p.R310C|1|0.13|ENSG00000026025|chr10:17234738-17234738|C/T|missense_variant	182.3913890336628	0.0010559746847940753	4				NaN	NaN	0	NaN	2689	2498	5188
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5190	17.463	NaN	21876	30	0	9722.7	0.106				-1	 	0	63	349.216424002821	1044.627442608663	3	349.2169189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2690	2498	5188
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5191	17.465	NaN	13929	30	0	1505.1	0.106	+			35981	SEHAVNKQL	9	88	513.27157301348	1024.5285930937598	2	513.2721557617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEHAVNKQL_	ENSG00000166595|ENST00000422424|CIAO2B;ENST00000562362.5_1_16:66966108-66968009:-|nuORF	87.69643885390035	0.07135982304947239	4				NaN	NaN	0	NaN	2691	2498	5188
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5192	17.467	NaN	7284.4	30	0	1752.5	0.106			+	22356	KTGTLIEKR	9	70	523.3211359673707	1044.6277190015412	2	523.3221435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTGTLIEKR_	REV__ENSG00000196169|ENST00000389916|KIF19	88.17693792209575	0.07000514020414955	4				NaN	NaN	0	NaN	2692	2498	5188
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5193	17.469	NaN	50840	30	0	7767.4	0.106				-1	 	0	114	368.88845060052176	1103.6435224017653	3	368.8888854980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2693	2498	5188
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5194	17.471	NaN	17544	30	0	4554.2	0.034			+	20985	KKFNNLAQ	8	73	481.77593887698845	NaN	0	481.77593994140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KKFNNLAQ_	REV__tr|U7SQT4|U7SQT4_FUSNUtypeIsite-specificdeoxyribonucleaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01572PE=3SV=1	55.50420428727701	1.7418937515398478	4				NaN	NaN	0	NaN	2694	2498	5188
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5195	17.471	NaN	5954.7	30	0	1040.6	0.141			+	19963	KEGNQRNIV	9	68	529.2900221191965	1056.5654913051928	2	529.2911376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KEGNQRNIV_	REV__ENSG00000196218|ENST00000359596|RYR1;REV__nc|ENSG00000196218|P21817-2|RYR1	49.44154591367651	0.3095138337212152	4				NaN	NaN	0	NaN	2695	2498	5188
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5213	17.511	NaN	31468	30	0	10552	0.214	+			20128	KEKLSKSE	8	92	474.77101741935303	947.5274819055061	2	474.7712707519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEKLSKSE_	CASP8AP2|p.D1810Mfs*3|1|0.43|ENSG00000118412|chr6:89868711-89868711|A/-|frameshift_variant;CASP8AP2|p.E1628Mfs*58|1|0.49|ENSG00000118412|chr6:89868163-89868164|-/AT|frameshift_variant;CASP8AP2|p.N1236Ifs*9|1|0.3|ENSG00000118412|chr6:89866990-89866990|A/-|frameshift_variant;CASP8AP2|p.N1917Kfs*4|1|0.24|ENSG00000118412|chr6:89869034-89869035|-/A|frameshift_variant;ENSG00000118412|ENST00000551025|CASP8AP2;ENST00000237177.10_1_6:90556308-90583533:+|nuORF;nc|ENSG00000118412|Q9UKL3|CASP8AP2	131.03138772384656	0.22501736558723914	4				NaN	NaN	0	NaN	2710	2501	5212
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5214	17.514	NaN	60606	30	0	26102	0.106	+			36396	SETKNANSL	9	91	482.2400885061184	962.4656240790368	2	482.2402038574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SETKNANSL_	ENSG00000137673|ENST00000260227|MMP7;ENST00000531200.1_1_11:102398162-102401431:-|nuORF;ENST00000533366.5_1_11:102395628-102401431:-|nuORF	141.52041321563706	0.009766778904176347	4				NaN	NaN	0	NaN	2711	2501	5212
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5215	17.516	NaN	44660	30	0	3893.4	0.106	+			45247	TVQEKTFNK	9	99	547.7947672008044	1093.5749814684086	2	547.7958374023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVQEKTFNK_	ENSG00000163104|ENST00000354268|SMARCAD1;nc|ENSG00000163104|Q9H4L7-2|SMARCAD1;SMARCAD1|p.K230Rfs*28|1|0.26|ENSG00000163104|chr4:94240985-94240985|A/-|frameshift_variant;SMARCAD1|p.K734Qfs*6|1|0.31|ENSG00000163104|chr4:94278630-94278631|-/C|frameshift_variant	101.45984612302182	0.0377122763612125	4				NaN	NaN	0	NaN	2712	2501	5212
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5216	17.518	NaN	12483	30	0	1134.2	0.106	+			46420	VEQTKEHAL	9	78	527.779162460578	1053.543771987956	2	527.7800903320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VEQTKEHAL_	ENSG00000136811|ENST00000351030|ODF2;ENST00000488909.1_1_9:131260677-131262531:+|nuORF;nc|ENSG00000136811|Q5BJF6-2|ODF2;nc|ENSG00000136811|Q5BJF6-3|ODF2;nc|ENSG00000136811|Q5BJF6-4|ODF2;nc|ENSG00000136811|Q5BJF6|ODF2	98.58198989935565	0.04066992115528678	4				NaN	NaN	0	NaN	2713	2501	5212
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5217	17.52	NaN	3720.4	30	0	442.22	0.106			+	30945	QEMELETKK	9	73	568.2880325154399	1134.5615120976797	2	568.2891845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QEMELETKK_	REV__ENST00000556211.1_1_14:35627286-35627364:-|nuORF	80.45461616416974	0.09558281504443908	4				NaN	NaN	0	NaN	2714	2501	5212
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5218	17.521	NaN	11424	30	0	2054.8	0.034				-1	 	0	77	485.7653072149159	969.5160614966318	2	485.7656555175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2715	2501	5212
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5219	17.522	NaN	6356.6	30	0	1089.3	0.142			+	19785	KEANRFVKL	9	85	552.8293804931033	1103.6442080530064	2	552.830322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KEANRFVKL_	REV__ENSG00000116539|ENST00000392403|ASH1L;REV__nc|ENSG00000116539|Q9NR48|ASH1L	82.7504851949679	0.08565546331141553	4				NaN	NaN	0	NaN	2716	2501	5212
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5237	17.561	NaN	123330	30	0	14809	0.195	+			38674	SSIRHMIRK	9	107	376.55307568804034	1126.637397664321	3	376.55364990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSIRHMIRK_	ENSG00000108107|ENST00000344063|RPL28;nc|ENSG00000108107|P46779-2|RPL28;nc|ENSG00000108107|P46779-3|RPL28	84.9155231211612	0.07920012719736333	4				NaN	NaN	0	NaN	2731	2504	5236
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5238	17.564	NaN	27701	30	0	3557.1	0.106	+			17773	IESSEETDQG	10	84	547.7279399357167	1093.4413269382333	2	547.7288818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IESSEETDQG_	ENSG00000105426|ENST00000262963|PTPRS;ENST00000588552.5_1_19:5159112-5286160:-|nuORF;nc|ENSG00000105426|Q13332-2|PTPRS;nc|ENSG00000105426|Q13332-3|PTPRS;nc|ENSG00000105426|Q13332-4|PTPRS;nc|ENSG00000105426|Q13332-5|PTPRS;nc|ENSG00000105426|Q13332-6|PTPRS;nc|ENSG00000105426|Q13332-7|PTPRS;PTPRS|p.P676Rfs*134|2|0.2|ENSG00000105426|chr19:5231438-5231438|G/-|frameshift_variant;PTPRS|p.S414Afs*30|3|0.23|ENSG00000105426|chr19:5244238-5244238|C/-|frameshift_variant	84.9155231211612	0.16018353804806162	4				NaN	NaN	0	NaN	2732	2504	5236
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5239	17.566	NaN	25907	30	0	7626.3	0.106	+			39713	STIPPHVQK	9	83	503.78723234379197	1005.559911754384	2	503.78759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STIPPHVQK_	ENSG00000163513|ENST00000295754|TGFBR2;nc|ENSG00000163513|P37173-2|TGFBR2;nc|ENSG00000163513|P37173-3|TGFBR2;TGFBR2|p.H523Rfs*19|1|0.27|ENSG00000163513|chr3:30691458-30691459|-/GACC|frameshift_variant	157.32903759742106	0.0051608477690748295	4				NaN	NaN	0	NaN	2733	2504	5236
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5240	17.568	NaN	18208	30	0	1786.1	0.106	+			34163	RTASFAVRK	9	93	345.8733437514789	NaN	0	345.87335205078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RTASFAVRK_	ENSG00000100347|ENST00000350028|SAMM50;ENST00000474323.5_1_22:44371844-44392260:+|nuORF	96.0336014099291	0.029433397039169355	4				NaN	NaN	0	NaN	2734	2504	5236
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5241	17.57	NaN	13362	30	0	6384.1	0.106				-1	 	0	76	518.3059783451099	1034.5974037570197	2	518.3067016601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2735	2504	5236
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5242	17.572	NaN	21982	30	0	12104	0.106	+			8517	EATLRIGTAVP	11	70	564.3254012897418	1126.6362496462834	2	564.3271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EATLRIGTAVP_	ENST00000395938.6_1_17:15164028-15165863:-|nuORF	79.71258880314673	0.15476893924564336	4				NaN	NaN	0	NaN	2736	2504	5236
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5243	17.573	NaN	13410	30	0	2798.8	0.035	+			49004	VVGPELHHK	9	70	508.2871585264115	1014.559764119623	2	508.2882385253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VVGPELHHK_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	104.74654710444128	0.034358562718640136	4				NaN	NaN	0	NaN	2737	2504	5236
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5261	17.611	NaN	22268	30	0	3715.3	0.214	+			44796	TTQRPLHINK	10	76	403.2345731178414	1206.6818899537243	3	403.2350158691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTQRPLHINK_	CACNA1C|p.A2072Pfs*18|1|0.55|ENSG00000151067|chr12:2688729-2688729|G/-|frameshift_variant;CACNA1C|p.P2073Qfs*17|1|0.21|ENSG00000151067|chr12:2688733-2688733|C/-|frameshift_variant;ENSG00000151067|ENST00000399655|CACNA1C;nc|ENSG00000151067|Q13936-10|CACNA1C;nc|ENSG00000151067|Q13936-11|CACNA1C;nc|ENSG00000151067|Q13936-13|CACNA1C;nc|ENSG00000151067|Q13936-14|CACNA1C;nc|ENSG00000151067|Q13936-15|CACNA1C;nc|ENSG00000151067|Q13936-16|CACNA1C;nc|ENSG00000151067|Q13936-17|CACNA1C;nc|ENSG00000151067|Q13936-18|CACNA1C;nc|ENSG00000151067|Q13936-19|CACNA1C;nc|ENSG00000151067|Q13936-2|CACNA1C;nc|ENSG00000151067|Q13936-20|CACNA1C;nc|ENSG00000151067|Q13936-21|CACNA1C;nc|ENSG00000151067|Q13936-22|CACNA1C;nc|ENSG00000151067|Q13936-23|CACNA1C;nc|ENSG00000151067|Q13936-24|CACNA1C;nc|ENSG00000151067|Q13936-25|CACNA1C;nc|ENSG00000151067|Q13936-26|CACNA1C;nc|ENSG00000151067|Q13936-27|CACNA1C;nc|ENSG00000151067|Q13936-28|CACNA1C;nc|ENSG00000151067|Q13936-29|CACNA1C;nc|ENSG00000151067|Q13936-3|CACNA1C;nc|ENSG00000151067|Q13936-30|CACNA1C;nc|ENSG00000151067|Q13936-31|CACNA1C;nc|ENSG00000151067|Q13936-32|CACNA1C;nc|ENSG00000151067|Q13936-33|CACNA1C;nc|ENSG00000151067|Q13936-34|CACNA1C;nc|ENSG00000151067|Q13936-35|CACNA1C;nc|ENSG00000151067|Q13936-36|CACNA1C;nc|ENSG00000151067|Q13936-37|CACNA1C;nc|ENSG00000151067|Q13936-4|CACNA1C;nc|ENSG00000151067|Q13936-5|CACNA1C;nc|ENSG00000151067|Q13936-6|CACNA1C;nc|ENSG00000151067|Q13936-7|CACNA1C;nc|ENSG00000151067|Q13936-8|CACNA1C;nc|ENSG00000151067|Q13936-9|CACNA1C;nc|ENSG00000151067|Q13936|CACNA1C	65.15724298150197	0.31893571707528906	4				NaN	NaN	0	NaN	2752	2507	5260
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5262	17.614	NaN	28733	30	0	10780	0.106			+	30293	PTKVLLEES	9	70	339.1937447689775	1014.5594049071326	3	339.1942138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PTKVLLEES_	REV__ENSG00000165671|ENST00000439151|NSD1;REV__nc|ENSG00000165671|Q96L73-2|NSD1;REV__nc|ENSG00000165671|Q96L73-3|NSD1;REV__NSD1|p.E1388A|1|0.34|ENSG00000165671|chr5:177238478-177238478|A/C|missense_variant;REV__NSD1|p.K1753Sfs*10|1|0.17|ENSG00000165671|chr5:177267669-177267669|A/-|frameshift_variant	34.172542307311794	0.4838870758800184	4				NaN	NaN	0	NaN	2753	2507	5260
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5263	17.616	NaN	24741	30	0	4499.2	0.106	+			44616	TTEGRNALIHK	11	86	413.89783533667423	1238.6716766102227	3	413.898193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TTEGRNALIHK_	DHX9|p.L1065Cfs*20|1|0.41|ENSG00000135829|chr1:182883563-182883563|C/-|frameshift_variant;ENSG00000135829|ENST00000367549|DHX9;ENST00000485081.5_1_1:182847108-182856566:+|nuORF	42.86426827375447	0.5187511139693657	4				NaN	NaN	0	NaN	2754	2507	5260
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5264	17.618	NaN	5609.6	30	0	1161.8	0.106	+			10086	ESKQDKAAS	9	71	482.2400885061184	962.4656240790368	2	482.26800537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ESKQDKAAS_	ENSG00000137871|ENST00000267807|ZNF280D;nc|ENSG00000285253|Q6N043-2|ZNF280D;nc|ENSG00000285253|Q6N043-5|ZNF280D	62.107414245175825	0.1960472003779324	4				NaN	NaN	0	NaN	2755	2507	5260
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5265	17.62	NaN	4159.7	30	0	620.94	0.106	+			21342	KLWMKFIIE	9	69	604.348647385216	1206.682741837232	2	604.34912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KLWMKFIIE_	ENST00000278616.8_1_11:108151731-108151785:+|nuORF	71.87747018426188	0.13267044672804276	4				NaN	NaN	0	NaN	2756	2507	5260
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5266	17.622	NaN	6970.5	30	0	3929.5	0.035				-1	 	0	59	515.766837399056	1029.519121864912	2	515.767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2757	2507	5260
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5267	17.622	NaN	2498.5	30	0	291.66	0.139	+			8198	EADALKHK	8	53	456.2507629394531	NaN	0	456.2507629394531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EADALKHK_	ATG5|p.K235Rfs*4|1|0.33|ENSG00000057663|chr6:106186664-106186664|T/-|frameshift_variant;ATG5|p.N236Efs*9|1|0.28|ENSG00000057663|chr6:106186663-106186664|-/T|frameshift_variant;ENSG00000057663|ENST00000369076|ATG5;ENST00000476518.1_1_6:106649790-106727677:-|nuORF;nc|ENSG00000057663|Q9H1Y0-2|ATG5	40.5726180659479	1.7418937515398478	4				NaN	NaN	0	NaN	2758	2507	5260
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5285	17.661	NaN	35120	30	0	5927.1	0.214	+			22338	KTGEVLDTK	9	90	495.7766909874869	989.5388290417739	2	495.7769470214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTGEVLDTK_	ENSG00000196937|ENST00000359943|FAM3C	101.45984612302182	0.0377122763612125	4				NaN	NaN	0	NaN	2773	2510	5284
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5286	17.665	NaN	38389	30	0	6825.9	0.106	+			40055	STNNIAQAR	9	84	487.7540657067186	973.4935784802373	2	487.75445556640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STNNIAQAR_	ENSG00000172380|ENST00000370982|GNG12;GNG12|p.F63Efs*8|1|0.1|ENSG00000172380|chr1:67705483-67705484|-/GAGATTTACCTTC|frameshift_variant	176.44474024533739	0.0016668318535579616	4				NaN	NaN	0	NaN	2774	2510	5284
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5287	17.667	NaN	40372	30	0	6364.8	0.106			+	12440	GEATPIHP	8	78	411.2113141613914	NaN	0	411.2113037109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEATPIHP_	REV__ENST00000477553.1_1_9:124091151-124091454:+|nuORF	62.97842346883844	1.7418937515398478	4				NaN	NaN	0	NaN	2775	2510	5284
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5288	17.669	NaN	13962	30	0	3391.6	0.106	+			2872	ASAPVTVKR	9	77	464.7819458863147	927.5493388394294	2	464.78228759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASAPVTVKR_	ENSG00000174579|ENST00000309993|MSL2;MSL2|p.K455Nfs*37|1|0.08|ENSG00000174579|chr3:136151516-136151516|T/-|frameshift_variant;MSL2|p.L557*|1|0.09|ENSG00000174579|chr3:136151211-136151211|A/-|frameshift_variant;nc|ENSG00000174579|Q9HCI7-2|MSL2	109.47833844074708	0.029530294723441826	4				NaN	NaN	0	NaN	2776	2510	5284
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5289	17.67	NaN	10070	30	0	1525.7	0.106			+	4214	ATGALAAAVG	10	58	401.2266290265221	800.4387051198443	2	401.22698974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATGALAAAVG_	REV__ENST00000388752.7_1_6:43027369-43027471:-|nuORF	63.30626980617807	0.33577009411590547	4				NaN	NaN	0	NaN	2777	2510	5284
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5290	17.672	NaN	13270	30	0	1769.3	0.036	+			19608	KDFSSEVLE	9	84	527.2606189576767	1052.5066849821533	2	527.2615356445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KDFSSEVLE_	DIS3L2|p.S345_D346insKSK|1|0.06|ENSG00000144535|chr2:232163543-232163544|-/AAAAGTAAA|inframe_insertion	74.25504064058377	0.12238981753128622	4				NaN	NaN	0	NaN	2778	2510	5284
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5291	17.673	NaN	3408	30	0	344.08	0.141			+	47303	VNQHHPQNV	9	70	536.7697800052524	NaN	0	536.3179321289062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VNQHHPQNV_	REV__ENSG00000128791|ENST00000262120|TWSG1	45.9519527083369	0.2345902329052062	4				NaN	NaN	0	NaN	2779	2510	5284
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5309	17.711	NaN	13526	30	0	2405	0.214	+			5522	AVAHALTEK	9	73	470.26534189083264	938.5161308484653	2	470.2663269042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVAHALTEK_	ENSG00000163468|ENST00000295688|CCT3;nc|ENSG00000163468|P49368-2|CCT3	143.8867514904718	0.008656634767784652	4				NaN	NaN	0	NaN	2794	2513	5308
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5310	17.715	NaN	22750	30	0	5932.3	0.106	+			41805	SVSRSPVPEK	10	83	543.3004628501203	1084.5863727670405	2	543.3013305664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVSRSPVPEK_	ENSG00000100650|ENST00000557154|SRSF5;ENST00000554465.5_1_14:70237039-70238175:+|nuORF;ENST00000554929.1_1_14:70237619-70238175:+|nuORF;nc|ENSG00000100650|Q13243-3|SRSF5	112.2953585152457	0.0411829880542106	4				NaN	NaN	0	NaN	2795	2513	5308
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5311	17.717	NaN	8051.9	30	0	1703	0.106	+			43404	TGIKTTSELK	10	55	359.87650643872917	1076.6076899163875	3	359.876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TGIKTTSELK_	tr|U7SHB1|U7SHB1_FUSNUAlkalineshockresponsemembraneanchorproteinAmaPOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02326PE=4SV=1	31.634271133179894	0.6214930414500597	4				NaN	NaN	0	NaN	2796	2513	5308
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5312	17.719	NaN	15889	30	0	6564	0.106	+			41806	SVSRSPVPEK	10	63	362.5360688150321	1084.5863770452963	3	362.53643798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVSRSPVPEK_	ENSG00000100650|ENST00000557154|SRSF5;ENST00000554465.5_1_14:70237039-70238175:+|nuORF;ENST00000554929.1_1_14:70237619-70238175:+|nuORF;nc|ENSG00000100650|Q13243-3|SRSF5	56.632244143249146	0.3964695498866976	4				NaN	NaN	0	NaN	2797	2513	5308
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5313	17.721	NaN	7604.7	30	0	994.87	0.106	+			41432	SVNGKVLSK	9	67	466.28156558436575	930.5485782355315	2	466.281982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVNGKVLSK_	ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2;NOMO1|p.P1102Hfs*42|1|0.36|ENSG00000103512|chr16:14886838-14886838|C/-|frameshift_variant;NOMO1|p.P141Sfs*12|1|0.33|ENSG00000103512|chr16:14846592-14846593|-/AG|frameshift_variant	120.30596017624542	0.02101454110788768	4				NaN	NaN	0	NaN	2798	2513	5308
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5314	17.722	NaN	6169.3	30	0	2048.7	0.036	+			42791	TEAKIKQKL	9	61	353.5566456817394	1057.6481076454181	3	353.5571594238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TEAKIKQKL_	ENSG00000072501|ENST00000322213|SMC1A;SMC1A|p.R426W|1|0.44|ENSG00000072501|chrX:53409482-53409482|G/A|missense_variant	32.81241826257853	0.4965981579233955	4				NaN	NaN	0	NaN	2799	2513	5308
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5315	17.723	NaN	3158.2	30	0	509.4	0.141				-1	PTPCPLTLK	9	52	342.86058374685797	1025.559921840774	3	342.8612060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_PTPC(Carbamidomethyl (C))PLTLK_	CNKSR1|p.H694Tfs*16|1|0.42|ENSG00000142675|chr1:26189460-26189460|C/-|frameshift_variant	36.446750945000026	0.4619375763483977	4				NaN	NaN	0	NaN	2800	2513	5308
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5333	17.762	NaN	10439	30	0	2943.2	0.214				-1	 	0	46	327.5376722045629	979.5911872138888	3	327.53814697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2815	2516	5332
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5334	17.765	NaN	18058	30	0	7133.3	0.106			+	-1	VCLTFRRTL	9	55	389.2216198275696	1164.6430300829088	3	389.2217712402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_VC(Carbamidomethyl (C))LTFRRTL_	REV__ENST00000552801.6_1_12:112369427-112370497:-|nuORF	27.882242232435846	0.5426732730940306	4				NaN	NaN	0	NaN	2816	2516	5332
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5335	17.768	NaN	61131	30	0	34727	0.106			+	-1	MEVTQEWDQR	10	82	669.2934535708608	1336.5723542085216	2	669.2952270507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))EVTQEWDQR_	REV__ENSG00000168026|ENST00000683103|TTC21A;REV__ENST00000459702.1_1_3:39149250-39159704:+|nuORF;REV__ENST00000479954.5_1_3:39149250-39159704:+|nuORF;REV__ENST00000493337.5_1_3:39150687-39159704:+|nuORF;REV__nc|ENSG00000168026|Q8NDW8-5|TTC21A;REV__nc|ENSG00000168026|Q8NDW8-6|TTC21A;REV__nc|ENSG00000168026|Q8NDW8-7|TTC21A;REV__nc|ENSG00000168026|Q8NDW8|TTC21A;REV__TTC21A|p.L505Pfs*116|1|0.3|ENSG00000168026|chr3:39126352-39126353|-/C|frameshift_variant	63.53385203322761	0.33370026130094593	4				NaN	NaN	0	NaN	2817	2516	5332
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5336	17.769	NaN	6915.8	30	0	892.5	0.106	+			41116	SVISHQHLSK	10	68	568.3150566796769	NaN	0	568.3150024414062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVISHQHLSK_	ENSG00000164749|ENST00000396423|HNF4G;nc|ENSG00000164749|Q14541-2|HNF4G;nc|ENSG00000164749|Q14541|HNF4G	107.45493779368988	0.011042689615346683	4				NaN	NaN	0	NaN	2818	2516	5332
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5337	17.771	NaN	4360.5	30	0	529.4	0.106	+			40517	STYSSQIRK	9	63	535.2857987147037	NaN	0	535.285888671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STYSSQIRK_	ENST00000469130.5_1_1:201751782-201763782:+|nuORF;nc|ENSG00000134369|Q8NEY1-2|NAV1;nc|ENSG00000134369|Q8NEY1-6|NAV1;nc|ENSG00000134369|Q8NEY1-7|NAV1	59.93077597824379	0.14961415694175798	4				NaN	NaN	0	NaN	2819	2516	5332
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5338	17.773	NaN	8846.3	30	0	2922.4	0.034	+			4055	ATDGTFSSK	9	62	457.21616691219504	912.4177808911901	2	457.21661376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATDGTFSSK_	ENSG00000083857|ENST00000441802|FAT1;FAT1|p.N3847Yfs*7|1|0.03|ENSG00000083857|chr4:186601370-186601371|-/TTATA|frameshift_variant;FAT1|p.P3228Lfs*42|1|0.27|ENSG00000083857|chr4:186611556-186611556|G/-|frameshift_variant;FAT1|p.P4313Lfs*36|1|0.34|ENSG00000083857|chr4:186596602-186596602|G/-|frameshift_variant	150.36159442982594	0.006784847064083231	4				NaN	NaN	0	NaN	2820	2516	5332
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5339	17.773	NaN	2086.7	30	0	556.58	0.137				-1	 	0	52	404.76072321046183	807.5068934877237	2	404.7611389160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2821	2516	5332
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5357	17.813	NaN	6629.4	30	0	685.95	0.214	+			44605	TTDRYIQQK	9	79	576.8029604163238	1151.5913678994475	2	576.8041381835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTDRYIQQK_	ENSG00000149480|ENST00000278823|MTA2;MTA2|p.A568Qfs*29|1|0.23|ENSG00000149480|chr11:62594402-62594402|T/-|frameshift_variant;MTA2|p.I556Hfs*8|1|0.29|ENSG00000149480|chr11:62594543-62594544|-/C|frameshift_variant;nc|ENSG00000149480|O94776-2|MTA2	114.85826248499774	0.024312442104607014	4				NaN	NaN	0	NaN	2836	2519	5356
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5358	17.816	NaN	22456	30	0	7144.4	0.106	+			40748	SVDGPVSQK	9	66	458.73987550499135	915.4651980767827	2	458.74005126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVDGPVSQK_	ENSG00000119231|ENST00000323460|SENP5;nc|ENSG00000119231|Q96HI0-2|SENP5	104.0567914643314	0.03506238181059741	4				NaN	NaN	0	NaN	2837	2519	5356
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5359	17.818	NaN	29525	30	0	7910.7	0.106	+			49178	VVMRDPNTK	9	81	530.2834360858636	1058.5523192385272	2	530.2846069335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVMRDPNTK_	chr12:54282662-54282800|482|460.96|0.0|25.46|+|ENST00000677249|HNRNPA1,HNRNPA1;ENSG00000135486|ENST00000340913|HNRNPA1;ENSG00000139675|ENST00000357495|HNRNPA1L2;ENSG00000224578|ENST00000565308|HNRNPA1L3;ENST00000441603.1_1_11:5593122-5593311:-|nuORF;ENST00000452488.1_1_2:41383770-41384067:+|nuORF;ENST00000457695.2_1_X:100110922-100111255:-|nuORF;ENST00000575692.1_1_17:2210089-2210875:+|nuORF;nc|ENSG00000135486|P09651-2|HNRNPA1;nc|ENSG00000135486|P09651-3|HNRNPA1	115.23196543181992	0.024086211614104236	4				NaN	NaN	0	NaN	2838	2519	5356
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5360	17.82	NaN	7962.9	30	0	1920.7	0.106	+			32127	QSLGDAFPELK	11	80	602.814455804911	1203.6143586766218	2	602.8148803710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QSLGDAFPELK_	ENSG00000090861|ENST00000261772|AARS1;nc|ENSG00000090861|P49588-2|AARS1	65.69465075029274	0.27262252711350304	4				NaN	NaN	0	NaN	2839	2519	5356
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5361	17.822	NaN	6164.1	30	0	1492.8	0.106			+	44839	TTTATTTLETL	11	71	384.8716753291129	1151.5931965875388	3	384.8716125488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TTTATTTLETL_	REV__ENSG00000117983|ENST00000529681|MUC5B;REV__ENSG00000117983|ENST00000529681|MUC5B;REV__ENSG00000117983|ENST00000529681|MUC5B;REV__ENSG00000117983|ENST00000529681|MUC5B;REV__MUC5B|p.E2447Vfs*233|1|0.15|ENSG00000117983|chr11:1244218-1244219|TG/-|frameshift_variant;REV__MUC5B|p.E2929Gfs*98|1|0.13|ENSG00000117983|chr11:1245660-1245661|-/GC|frameshift_variant;REV__MUC5B|p.P2717Qfs*3|2|0.21|ENSG00000117983|chr11:1245025-1245025|C/-|frameshift_variant;REV__MUC5B|p.P3417Qfs*3|1|0.41|ENSG00000117983|chr11:1247125-1247125|C/-|frameshift_variant;REV__MUC5B|p.S3126Pfs*13|1|0.37|ENSG00000117983|chr11:1246251-1246251|C/-|frameshift_variant;REV__MUC5B|p.S3878Pfs*27|1|0.13|ENSG00000117983|chr11:1248507-1248507|C/-|frameshift_variant;REV__MUC5B|p.S4017Lfs*56|1|0.22|ENSG00000117983|chr11:1248928-1248929|-/C|frameshift_variant;REV__MUC5B|p.T4706Pfs*4|2|0.37|ENSG00000117983|chr11:1250996-1250996|A/-|frameshift_variant;REV__MUC5B|p.T4706Pfs*4|2|0.37|ENSG00000117983|chr11:1250996-1250996|A/-|frameshift_variant;REV__MUC5B|p.T4706Pfs*4|2|0.37|ENSG00000117983|chr11:1250996-1250996|A/-|frameshift_variant	48.601550744091256	0.44024757269956427	4				NaN	NaN	0	NaN	2840	2519	5356
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5362	17.824	NaN	6541.5	30	0	2216.5	0.033			+	16688	HITGAPHK	8	65	430.74031067132654	NaN	0	430.7402648925781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HITGAPHK_	REV__ENSG00000103494|ENST00000647211|RPGRIP1L;REV__nc|ENSG00000103494|Q68CZ1-2|RPGRIP1L	50.0245360154114	1.7418937515398478	4				NaN	NaN	0	NaN	2841	2519	5356
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5363	17.824	NaN	56321	30	0	10967	0.14	+			38266	SQNTDMVQK	9	101	525.746702362959	1049.478851792718	2	525.7477416992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SQNTDMVQK_	ENSG00000113282|ENST00000411809|CLINT1	177.3047273071476	0.0015666121956477066	4				NaN	NaN	0	NaN	2842	2519	5356
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5381	17.864	NaN	18711	30	0	4764.2	0.214	+			24502	LGILMGVAIRT	11	77	387.2336945896661	NaN	0	387.2337951660156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LGILM(Oxidation (M))GVAIRT_	ENSG00000103657|ENST00000443617|HERC1	54.722347961057174	0.2814010645723107	4				NaN	NaN	0	NaN	2857	2522	5380
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5382	17.867	NaN	24768	30	0	4701.3	0.106	+			40062	STNNMAYNK	9	79	521.7339080315967	1041.4532631299933	2	521.735107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STNNMAYNK_	ENSG00000163110|ENST00000317968|PDLIM5	199.70438780651162	3.456851077920069E-05	4				NaN	NaN	0	NaN	2858	2522	5380
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5383	17.869	NaN	6041.3	30	0	1056	0.106			+	18741	ITIERIGA	8	64	436.7630626268083	871.5115723204166	2	436.763427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ITIERIGA_	REV__CON__Q9DCV7	87.75429964447693	0.2842685068779738	4				NaN	NaN	0	NaN	2859	2522	5380
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5384	17.871	NaN	8440	30	0	1727.4	0.106				-1	 	0	69	485.7653072149159	969.5160614966318	2	485.76605224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2860	2522	5380
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5385	17.873	NaN	11655	30	0	1373.2	0.106	+			19260	KAEEVDVTK	9	77	509.773593089226	1017.532633245252	2	509.7743225097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KAEEVDVTK_	ENSG00000131711|ENST00000296755|MAP1B;MAP1B|p.E2165Gfs*3|1|0.32|ENSG00000131711|chr5:72199841-72199842|-/C|frameshift_variant;MAP1B|p.E871Afs*22|1|0.13|ENSG00000131711|chr5:72195965-72195966|TG/-|frameshift_variant;MAP1B|p.P1789Hfs*34|1|0.31|ENSG00000131711|chr5:72198718-72198718|C/-|frameshift_variant;MAP1B|p.Y2023Afs*214|1|0.03|ENSG00000131711|chr5:72199421-72199422|-/GC|frameshift_variant	99.01295224348159	0.040209060045561164	4				NaN	NaN	0	NaN	2861	2522	5380
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5386	17.875	NaN	9485.8	30	0	1961.7	0.036			+	13511	GLPPSMLTLM	10	58	353.85799083131326	1058.5521430941399	3	353.8585510253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GLPPSMLTLM_	REV__ENSG00000198216|ENST00000367573|CACNA1E;REV__nc|ENSG00000198216|Q15878-2|CACNA1E;REV__nc|ENSG00000198216|Q15878-3|CACNA1E	30.317721548370564	0.6322445173429027	4				NaN	NaN	0	NaN	2862	2522	5380
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5387	17.875	NaN	2479.2	30	0	462.7	0.138	+			4051	ATDGSFANK	9	55	455.7161950799825	909.4178372267651	2	455.71661376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATDGSFANK_	ENSG00000178104|ENST00000695795|PDE4DIP;nc|ENSG00000178104|Q5VU43-3|PDE4DIP;nc|ENSG00000178104|Q5VU43-4|PDE4DIP;nc|ENSG00000178104|Q5VU43|PDE4DIP	64.20726635412375	0.17854274437659667	4				NaN	NaN	0	NaN	2863	2522	5380
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5405	17.915	NaN	218190	30	0	109490	0.113			+	27764	MREWCLQGPMA	11	95	697.8039524612634	1393.5933519893267	2	697.8056030273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))REWC(Carbamidomethyl (C))LQGPMA_	REV__ENST00000246194.7_1_20:32659989-32661416:+|nuORF	67.49366992349736	0.25663419177724	4				NaN	NaN	0	NaN	2878	2525	5404
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5406	17.917	NaN	29450	30	0	4483.8	0.106	+			3715	ATAASSSSLEK	11	89	526.2661889965606	1050.517825059921	2	526.26708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATAASSSSLEK_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENST00000417985.1_1_X:46147855-46148119:-|nuORF;ENST00000418987.2_1_9:103493819-103494230:+|nuORF;ENST00000423183.1_1_3:12112396-12112453:+|nuORF;ENST00000450451.1_1_1:238090483-238090852:+|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2	107.45493779368988	0.045275086874925735	4				NaN	NaN	0	NaN	2879	2525	5404
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5407	17.919	NaN	157890	30	0	54640	0.106	+			15779	GVTRVTIRK	9	106	343.88837247828235	1028.6432880350471	3	343.8890075683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GVTRVTIRK_	ENSG00000196531|ENST00000454682|NACA;ENST00000419462.1_1_8:102381113-102381542:+|nuORF;nc|ENSG00000196531|E9PAV3-2|NACA;nc|ENSG00000196531|Q13765|NACA;nc|ENSG00000228224|Q9BZK3|NACA4P	76.16968421966216	0.11411088698345859	4				NaN	NaN	0	NaN	2880	2525	5404
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5408	17.921	NaN	25683	30	0	11992	0.106				-1	 	0	68	418.2290632508643	834.4435735685286	2	418.2294616699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2881	2525	5404
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5409	17.922	NaN	39880	30	0	5475.6	0.106	+			30682	QCIGAQHKWI	10	96	592.3061122117912	1182.5976714903823	2	592.30712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QCIGAQHKWI_	ENSG00000112685|ENST00000230449|EXOC2	51.33545320467046	0.4446945571623749	4				NaN	NaN	0	NaN	2882	2525	5404
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5410	17.924	NaN	38559	30	0	16432	0.106				-1	 	0	78	395.20673200271267	1182.598366608338	3	395.2069396972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2883	2525	5404
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5411	17.926	NaN	17157	30	0	2873.5	0.035	+			39714	STIPPHVQK	9	83	503.78723234379197	1005.559911754384	2	503.7876281738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STIPPHVQK_	ENSG00000163513|ENST00000295754|TGFBR2;nc|ENSG00000163513|P37173-2|TGFBR2;nc|ENSG00000163513|P37173-3|TGFBR2;TGFBR2|p.H523Rfs*19|1|0.27|ENSG00000163513|chr3:30691458-30691459|-/GACC|frameshift_variant	113.41158876095287	0.025516849225023126	4				NaN	NaN	0	NaN	2884	2525	5404
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5412	17.927	NaN	13427	30	0	1742.2	0.139				-1	 	0	64	358.73640332772754	715.4582537222551	2	358.7368469238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2885	2525	5404
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5430	17.964	NaN	76512	30	0	26526	0.214				-1	 	0	93	450.2265467187696	898.4385405043392	2	450.22686767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2900	2528	5429
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5431	17.968	NaN	83742	30	0	13951	0.106	+			40203	STSCPVVQK	9	94	503.2545608169375	1004.494568700675	2	503.2552185058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_STSC(Carbamidomethyl (C))PVVQK_	ENSG00000130935|ENST00000253247|NOL11;ENST00000583108.5_1_17:65733963-65734484:+|nuORF	161.89823264540465	0.004149850016316161	4				NaN	NaN	0	NaN	2901	2528	5429
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5432	17.97	NaN	84812	30	0	7818.3	0.106	+			15429	GTYRDANIK	9	101	519.2717547181168	1036.5289565030334	2	519.2723388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTYRDANIK_	ENSG00000112531|ENST00000361752|QKI;nc|ENSG00000112531|Q96PU8-3|QKI;nc|ENSG00000112531|Q96PU8-5|QKI;nc|ENSG00000112531|Q96PU8-6|QKI;nc|ENSG00000112531|Q96PU8-8|QKI;nc|ENSG00000112531|Q96PU8-9|QKI	125.71293069911285	0.017741295328254008	4				NaN	NaN	0	NaN	2902	2528	5429
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5433	17.972	NaN	15843	30	0	7023	0.106	+			10136	ESQRTFSAR	9	71	541.2731628175299	1080.5317727018596	2	541.2741088867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ESQRTFSAR_	ENSG00000164050|ENST00000296440|PLXNB1;ENST00000461261.1_1_3:48453511-48454330:-|nuORF;ENST00000485535.5_1_3:48445895-48454598:-|nuORF;nc|ENSG00000164050|O43157-2|PLXNB1;PLXNB1|p.R1634H|1|0.29|ENSG00000164050|chr3:48412574-48412574|C/T|missense_variant	71.87747018426188	0.13267044672804276	4				NaN	NaN	0	NaN	2903	2528	5429
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5434	17.973	NaN	74924	30	0	12475	0.106				-1	 	0	102	473.74502427559474	945.4754956179895	2	473.7451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2904	2528	5429
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5435	17.975	NaN	3931.5	30	0	1596.9	0.036			+	-1	TVGRPGPACR	10	44	357.52169942377014	1069.5432688715105	3	357.5221252441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_TVGRPGPAC(Carbamidomethyl (C))R_	REV__ENST00000394685.7_1_15:81071845-81165978:+|nuORF	28.081489160057373	0.6505064946289502	4				NaN	NaN	0	NaN	2905	2528	5429
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5436	17.976	NaN	6486.5	30	0	1432.5	0.138	+			3542	ASSTPGLNK	9	60	437.7346927952356	873.4548326572713	2	437.7348327636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASSTPGLNK_	ENSG00000167799|ENST00000376693|NUDT8;ENST00000301490.8_2_11:67395419-67395788:-|nuORF	60.11826168202944	0.21262886028301267	4				NaN	NaN	0	NaN	2906	2528	5429
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5454	18.015	NaN	99496	30	0	43928	0.105			+	-1	TGLVMMILQ	9	66	346.5167751755276	1036.5284961267828	3	346.517333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_TGLVM(Oxidation (M))M(Oxidation (M))ILQ_	REV__ENSG00000166484|ENST00000395604|MAPK7;REV__ENST00000490660.2_1_17:19282213-19285121:+|nuORF;REV__ENST00000570306.5_1_17:19283765-19285121:+|nuORF;REV__nc|ENSG00000166484|Q13164-2|MAPK7;REV__nc|ENSG00000166484|Q13164-3|MAPK7;REV__nc|ENSG00000166484|Q13164-4|MAPK7	45.97224482568171	0.3502073465782774	4				NaN	NaN	0	NaN	2921	2531	5453
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5455	18.017	NaN	153310	30	0	38802	0.106	+			48901	VVDNGSGMCK	10	85	533.7353650064481	1065.456177079696	2	533.7366943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_VVDNGSGMC(Carbamidomethyl (C))K_	ACTBL2|p.R29Gfs*7|1|0.37|ENSG00000169067|chr5:57482623-57482623|G/-|frameshift_variant;ENSG00000075624|ENST00000646664|ACTB;ENSG00000169067|ENST00000423391|ACTBL2;ENST00000418351.1_1_15:44282253-44282364:-|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000477812.1_1_7:5569027-5569288:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF	166.0711670676379	0.0049346292030699205	4				NaN	NaN	0	NaN	2922	2531	5453
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5456	18.019	NaN	10548	30	0	864.76	0.106			+	3546	ASTAEDSLLI	10	94	340.51333712791023	1018.5181819839307	3	340.5138854980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASTAEDSLLI_	REV__tr|U7SWZ0|U7SWZ0_FUSNUMethionineimportATP-bindingproteinMetNOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01221PE=4SV=1	40.77816245573522	0.5419747034533848	4				NaN	NaN	0	NaN	2923	2531	5453
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5457	18.021	NaN	46268	30	0	11130	0.106			+	19549	KCIECKFCTSH	11	89	706.8095098531621	1411.6044667731242	2	706.81103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_KCIEC(Carbamidomethyl (C))KFC(Carbamidomethyl (C))TSH_	REV__ENSG00000136155|ENST00000349847|SCEL;REV__nc|ENSG00000136155|O95171-2|SCEL;REV__nc|ENSG00000136155|O95171-3|SCEL	45.97224482568171	0.4762245054624163	4				NaN	NaN	0	NaN	2924	2531	5453
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5458	18.022	NaN	6159.6	30	0	826.12	0.106	+			17404	IAQDHRSSL	9	72	513.7711975765249	1025.5278422198496	2	513.7702026367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IAQDHRSSL_	ARHGEF10|p.E997Gfs*16|1|0.43|ENSG00000104728|chr8:1928644-1928644|A/-|frameshift_variant;ARHGEF10|p.P976Rfs*8|1|0.14|ENSG00000104728|chr8:1928577-1928577|C/-|frameshift_variant;ENSG00000104728|ENST00000349830|ARHGEF10;ENST00000523711.5_1_8:1824717-1874701:+|nuORF;nc|ENSG00000104728|O15013-4|ARHGEF10;nc|ENSG00000104728|O15013-6|ARHGEF10;nc|ENSG00000104728|O15013-7|ARHGEF10;nc|ENSG00000104728|O15013|ARHGEF10	37.50817390946774	0.44948750990682723	4				NaN	NaN	0	NaN	2925	2531	5453
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5459	18.024	NaN	5124.8	30	0	590.21	0.106	+			3567	ASTSQAFNK	9	66	477.2373614027054	952.4601698722108	2	477.23779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASTSQAFNK_	CLMN|p.H819Mfs*29|1|0.43|ENSG00000165959|chr14:95202894-95202894|G/-|frameshift_variant;CLMN|p.K865Rfs*10|2|0.35|ENSG00000165959|chr14:95196612-95196612|T/-|frameshift_variant;ENSG00000165959|ENST00000298912|CLMN;ENST00000556454.1_1_14:95660863-95677170:-|nuORF	63.53385203322761	0.18415635464017938	4				NaN	NaN	0	NaN	2926	2531	5453
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5460	18.026	NaN	8433.7	30	0	2303.1	0.033	+			4296	ATGGWSSSK	9	68	440.71117318267864	879.4077934321573	2	440.71136474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATGGWSSSK_	BAHD1|p.P431Lfs*16|1|0.42|ENSG00000140320|chr15:40459754-40459754|C/-|frameshift_variant;ENSG00000140320|ENST00000416165|BAHD1;nc|ENSG00000140320|Q8TBE0-2|BAHD1;nc|ENSG00000140320|Q8TBE0-3|BAHD1	93.5975768576971	0.05472259948179787	4				NaN	NaN	0	NaN	2927	2531	5453
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5461	18.027	NaN	4980.7	30	0	740.34	0.142	+			30772	QDRRMMFPP	9	73	589.2841534775268	1176.5537540218536	2	589.2855834960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_QDRRMMFPP_	ENSG00000150527|ENST00000640607|MIA2;ENSG00000236761|ENST00000314099|CTAGE9;ENST00000435712.1_1_10:131904549-131906742:+|nuORF;nc|ENSG00000150527|Q96PC5-10|MIA2;nc|ENSG00000150527|Q96PC5-11|MIA2;nc|ENSG00000150527|Q96PC5-12|MIA2;nc|ENSG00000150527|Q96PC5-13|MIA2;nc|ENSG00000150527|Q96PC5-14|MIA2;nc|ENSG00000150527|Q96PC5-5|MIA2;nc|ENSG00000150527|Q96PC5-6|MIA2;nc|ENSG00000150527|Q96PC5-7|MIA2;nc|ENSG00000150527|Q96PC5-8|MIA2;nc|ENSG00000150527|Q96PC5-9|MIA2;nc|ENSG00000288784|Q8IX94|CTAGE4;nc|ENSG00000289604|P0CG41|CTAGE8	102.7733458925114	0.03637199559902695	4				NaN	NaN	0	NaN	2928	2531	5453
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5479	18.066	NaN	220970	30	0	25917	0.072	+			34368	RTQNVLGEK	9	89	522.7926677141436	1043.570782495087	2	522.7935180664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTQNVLGEK_	ENSG00000149273|ENST00000531188|RPS3;ENST00000407940.1_1_6:7339375-7339741:-|nuORF;ENST00000529173.5_1_11:75110591-75112804:+|nuORF;nc|ENSG00000149273|P23396-2|RPS3	156.16072019525166	0.005433163824165674	4				NaN	NaN	0	NaN	2943	2534	5478
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5480	18.067	NaN	105940	30	0	23904	0.106	+			38985	SSSDEETL	8	56	455.1878251249312	908.3610973166624	2	455.1882019042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SSSDEETL_	nc|ENSG00000127603|Q9UPN3-2|MACF1;nc|ENSG00000127603|Q9UPN3-4|MACF1;nc|ENSG00000127603|Q9UPN3|MACF1	50.0245360154114	0.5941082100236891	4				NaN	NaN	0	NaN	2944	2534	5478
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5481	18.069	NaN	18997	30	0	2792.3	0.106				-1	 	0	83	485.7653072149159	969.5160614966318	2	486.2669372558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2945	2534	5478
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5482	18.071	NaN	23616	30	0	5685.4	0.106			+	19550	KCIECKFCTSH	11	77	678.2988256090151	1354.5830982848302	2	678.3003540039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_KC(Carbamidomethyl (C))IECKFCTSH_	REV__ENSG00000136155|ENST00000349847|SCEL;REV__nc|ENSG00000136155|O95171-2|SCEL;REV__nc|ENSG00000136155|O95171-3|SCEL	49.536043120802724	0.4274608637932522	4				NaN	NaN	0	NaN	2946	2534	5478
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5483	18.073	NaN	19885	30	0	6617.5	0.106				-1	 	0	87	351.22506891618247	1050.6533773487474	3	351.2255554199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2947	2534	5478
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5484	18.075	NaN	20929	30	0	2817.8	0.106			+	9512	EKVRSPKPK	9	91	534.8298107408823	1067.6450685485645	2	535.837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EKVRSPKPK_	REV__ENSG00000090889|ENST00000374403|KIF4A;REV__ENSG00000226650|ENST00000435029|KIF4B;REV__nc|ENSG00000090889|O95239-2|KIF4A	36.446750945000026	0.4619375763483977	4				NaN	NaN	0	NaN	2948	2534	5478
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5485	18.076	NaN	9412	30	0	2280	0.106			+	25962	LSINELIRDK	10	65	400.90252325085316	1199.6857403527595	3	400.90301513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSINELIRDK_	REV__ENSG00000116786|ENST00000375799|PLEKHM2;REV__ENST00000462455.1_1_1:16011053-16044472:+|nuORF;REV__nc|ENSG00000116786|Q8IWE5-2|PLEKHM2;REV__PLEKHM2|p.E769Rfs*51|2|0.23|ENSG00000116786|chr1:15730622-15730622|C/-|frameshift_variant;REV__PLEKHM2|p.Q373Rfs*22|1|0.57|ENSG00000116786|chr1:15727184-15727184|C/-|frameshift_variant	53.08895987439943	0.42869529153390606	4				NaN	NaN	0	NaN	2949	2534	5478
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5486	18.078	NaN	3210.7	30	0	248.77	0.034			+	-1	QERCLTGP	8	59	480.7319146915796	NaN	0	480.7716369628906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Carbamidomethyl (C)	_QERC(Carbamidomethyl (C))LTGP_	REV__ADAM19|p.P794Lfs*18|1|0.07|ENSG00000135074|chr5:157488434-157488434|G/-|frameshift_variant;REV__ENSG00000135074|ENST00000257527|ADAM19;REV__ENST00000517951.5_1_5:156822576-156936463:-|nuORF;REV__nc|ENSG00000135074|Q9H013|ADAM19	63.30626980617807	1.7418937515398478	4				NaN	NaN	0	NaN	2950	2534	5478
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5504	18.116	NaN	208760	30	0	71870	0.209				-1	 	0	109	343.188580563458	1026.543912290574	3	343.18914794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2965	2537	5503
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5505	18.119	NaN	30546	30	0	13487	0.106	+			14246	GSSSVAAMK	9	71	419.20972895177925	836.4049049703585	2	419.2101745605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSSSVAAMK_	ENSG00000174021|ENST00000370645|GNG5;GNG5-NMI|1|fusion	122.1759843771914	0.019882474861609503	4				NaN	NaN	0	NaN	2966	2537	5503
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5506	18.121	NaN	18771	30	0	8640.8	0.106				-1	 	0	63	359.2199661588535	1074.6380690767605	3	359.2204284667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2967	2537	5503
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5507	18.123	NaN	26283	30	0	4682.2	0.106			+	23180	KWMRTILK	8	82	538.3263145947009	1074.6380762562017	2	538.3272705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KWMRTILK_	REV__nc|ENSG00000166387|Q8ND30-3|PPFIBP2	58.78195531508484	0.5138399468736706	4				NaN	NaN	0	NaN	2968	2537	5503
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5508	18.125	NaN	17838	30	0	3528.1	0.106				-1	 	0	82	361.8678151676304	1082.5816161030912	3	361.8682556152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2969	2537	5503
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5509	18.127	NaN	10045	30	0	1482.6	0.106	+			30389	PVPVGDTS	8	64	386.1978147857413	770.3810766382826	2	386.19781494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PVPVGDTS_	ENSG00000081148|ENST00000193391|IMPG2;IMPG2|p.F1232Lfs*2|1|0.3|ENSG00000081148|chr3:101228814-101228814|A/-|frameshift_variant	33.51558372728122	0.7005509609380386	4				NaN	NaN	0	NaN	2970	2537	5503
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5510	18.129	NaN	6846.1	30	0	1090.8	0.036			+	10118	ESMHLLLIGA	10	67	542.2980191157232	1082.5814852982462	2	542.2991333007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ESMHLLLIGA_	REV__ENSG00000065882|ENST00000698857|TBC1D1;REV__ENST00000401554.5_1_4:38112345-38138953:+|nuORF;REV__ENST00000407365.5_1_4:38113700-38138953:+|nuORF;REV__nc|ENSG00000065882|Q86TI0-2|TBC1D1;REV__nc|ENSG00000065882|Q86TI0|TBC1D1	55.50420428727701	0.4067289358710215	4				NaN	NaN	0	NaN	2971	2537	5503
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5528	18.166	NaN	56273	30	0	10125	0.214				-1	 	0	80	463.73190120740264	925.4492494816053	2	463.7322082519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2986	2540	5527
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5529	18.17	NaN	13318	30	0	3585.5	0.106	+			40716	SVCGKGFSR	9	76	499.24712850791406	996.4797040826281	2	499.2476501464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SVC(Carbamidomethyl (C))GKGFSR_	ENSG00000136451|ENST00000581208|VEZF1;ENST00000423931.1_1_3:192873384-192874521:-|nuORF	81.52500206392136	0.09095445986635249	4				NaN	NaN	0	NaN	2987	2540	5527
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5530	18.172	NaN	42122	30	0	7421.5	0.106	+			1860	AILDKTTNK	9	91	502.29183864524845	1002.5691243572969	2	502.2926025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AILDKTTNK_	ENSG00000076067|ENST00000262031|RBMS2;ENSG00000153250|ENST00000348849|RBMS1;nc|ENSG00000153250|P29558-2|RBMS1	180.09051358498644	0.0012869539350500664	4				NaN	NaN	0	NaN	2988	2540	5527
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5531	18.174	NaN	4138.6	30	0	496.47	0.106				-1	 	0	68	435.24501215830134	868.4754713834027	2	435.24542236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2989	2540	5527
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5532	18.175	NaN	22459	30	0	4933.3	0.106				-1	 	0	70	356.88845824435725	1067.6435453332717	3	356.8889465332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2990	2540	5527
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5533	18.177	NaN	8893.6	30	0	2942.9	0.035				-1	 	0	68	515.2714125209766	514.2641360543765	1	515.2720947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2991	2540	5527
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5534	18.178	NaN	16197	30	0	2871.6	0.141			+	21712	KQITSHVKK	9	78	534.8298107408823	1067.6450685485645	2	534.8301391601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KQITSHVKK_	REV__ENSG00000068784|ENST00000263736|SRBD1;REV__SRBD1|p.T783Ifs*12|1|0.05|ENSG00000068784|chr2:45413279-45413280|-/CCAAA|frameshift_variant	75.04331003522576	0.118981335847003	4				NaN	NaN	0	NaN	2992	2540	5527
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5553	18.217	NaN	1142800	30	0	296990	0.126	+			4072	ATDKSFVEK	9	112	342.1812698996776	1023.5219802992328	3	342.1817626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATDKSFVEK_	ENSG00000100345|ENST00000216181|MYH9;ENSG00000105357|ENST00000642316|MYH14;ENSG00000133392|ENST00000300036|MYH11;MYH14|p.L1950Sfs*14|1|0.34|ENSG00000105357|chr19:50309646-50309646|C/-|frameshift_variant;MYH14|p.M997*|1|0.19|ENSG00000105357|chr19:50271483-50271483|A/-|frameshift_variant;MYH14|p.R929Gfs*44|1|0.38|ENSG00000105357|chr19:50268237-50268237|G/-|frameshift_variant;MYH9|p.I784*|1|0.07|ENSG00000100345|chr22:36304036-36304036|G/-|frameshift_variant;nc|ENSG00000100345|P35579-2|MYH9;nc|ENSG00000105357|Q7Z406-4|MYH14;nc|ENSG00000105357|Q7Z406-5|MYH14;nc|ENSG00000105357|Q7Z406-6|MYH14;nc|ENSG00000105357|Q7Z406|MYH14;nc|ENSG00000133392|P35749-2|MYH11;nc|ENSG00000133392|P35749-3|MYH11;nc|ENSG00000133392|P35749-4|MYH11	74.1650062923329	0.12277912660386392	4				NaN	NaN	0	NaN	3008	2543	5552
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5554	18.22	NaN	52997	30	0	23624	0.106				-1	 	0	93	336.1778025736067	1005.5115783210201	3	336.1783447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3009	2543	5552
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5555	18.222	NaN	77778	30	0	24821	0.106			+	2280	ALYRPQPTQ	9	77	537.2911924805906	1072.567832027981	2	537.2927856445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ALYRPQPTQ_	REV__ENSG00000141622|ENST00000269439|RNF165;REV__RNF165|p.E286Rfs*22|1|0.34|ENSG00000141622|chr18:46456009-46456009|G/-|frameshift_variant	80.45461616416974	0.09558281504443908	4				NaN	NaN	0	NaN	3010	2543	5552
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5556	18.223	NaN	57231	30	0	8127.7	0.106				-1	 	0	95	426.7262127995294	851.4378726658588	2	426.7265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3011	2543	5552
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5557	18.225	NaN	29232	30	0	5386.8	0.106				-1	AVEPSSSE	8	78	424.1877915032159	846.3610300732319	2	424.1881408691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))AVEPSSSE_	nc|ENSG00000196353|Q96A23-2|CPNE4	42.47446043378293	0.6409579893742323	4				NaN	NaN	0	NaN	3012	2543	5552
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5558	18.227	NaN	51322	30	0	6404.2	0.106	+			42739	TDKSFVEK	8	96	477.25006393617934	952.4855749391587	2	477.25030517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TDKSFVEK_	ENSG00000100345|ENST00000216181|MYH9;ENSG00000105357|ENST00000642316|MYH14;ENSG00000133392|ENST00000300036|MYH11;MYH14|p.L1950Sfs*14|1|0.34|ENSG00000105357|chr19:50309646-50309646|C/-|frameshift_variant;MYH14|p.M997*|1|0.19|ENSG00000105357|chr19:50271483-50271483|A/-|frameshift_variant;MYH14|p.R929Gfs*44|1|0.38|ENSG00000105357|chr19:50268237-50268237|G/-|frameshift_variant;MYH9|p.I784*|1|0.07|ENSG00000100345|chr22:36304036-36304036|G/-|frameshift_variant;nc|ENSG00000100345|P35579-2|MYH9;nc|ENSG00000105357|Q7Z406-4|MYH14;nc|ENSG00000105357|Q7Z406-5|MYH14;nc|ENSG00000105357|Q7Z406-6|MYH14;nc|ENSG00000105357|Q7Z406|MYH14;nc|ENSG00000133392|P35749-2|MYH11;nc|ENSG00000133392|P35749-3|MYH11;nc|ENSG00000133392|P35749-4|MYH11	209.1949250693894	0.00017645867821249856	4				NaN	NaN	0	NaN	3013	2543	5552
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5559	18.229	NaN	32012	30	0	9096.2	0.035				-1	 	0	84	512.7685729563444	1023.5225929794889	2	512.7692260742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3014	2543	5552
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5560	18.229	NaN	57555	30	0	36637	0.14	+			30470	QAEEKAHAF	9	75	515.7507215990136	1029.486890264827	2	515.7515258789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_QAEEKAHAF_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	134.81075121484326	0.012914550297035062	4				NaN	NaN	0	NaN	3015	2543	5552
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5578	18.269	NaN	40421	30	0	11580	0.214	+			35604	SCCPVGCAK	9	83	491.200288680527	980.3860244278541	2	491.20111083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_SCC(Carbamidomethyl (C))PVGC(Carbamidomethyl (C))AK_	CON__P67983;ENSG00000125144|ENST00000379811|MT1G;ENSG00000125148|ENST00000245185|MT2A;ENSG00000169688|ENST00000334346|MT1B;ENSG00000187193|ENST00000394485|MT1X;ENSG00000205364|ENST00000379818|MT1M;ENST00000330439.6_1_16:56660742-56660880:+|nuORF;ENST00000562017.1_1_16:56643131-56643263:+|nuORF;ENST00000563985.1_1_16:56642884-56643263:+|nuORF;ENST00000567300.1_1_16:56642646-56643263:+|nuORF;nc|ENSG00000125144|P13640-2|MT1G;nc|ENSG00000169715|P04732|MT1E	118.74307786436346	0.02196067127630568	4				NaN	NaN	0	NaN	3030	2546	5577
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5579	18.272	NaN	60671	30	0	21054	0.106				-1	 	0	96	456.76611110124713	911.5176692692943	2	456.7666320800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3031	2546	5577
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5580	18.274	NaN	27587	30	0	5667.5	0.106				-1	 	0	85	434.2372560663211	866.4599591994422	2	434.2376708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3032	2546	5577
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5581	18.276	NaN	11153	30	0	2441.2	0.106			+	21929	KRYEQLVA	8	81	503.78723234379197	1005.559911754384	2	503.7873840332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KRYEQLVA_	REV__ENSG00000175054|ENST00000350721|ATR;REV__nc|ENSG00000175054|Q13535-2|ATR;REV__nc|ENSG00000175054|Q13535-3|ATR	63.30626980617807	0.4690498839812213	4				NaN	NaN	0	NaN	3033	2546	5577
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5582	18.278	NaN	7772.7	30	0	1178.4	0.106	+			31207	QGRLGSVPAT	10	75	493.27440509314465	984.5342572530893	2	493.2746276855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QGRLGSVPAT_	ENST00000491449.5_1_22:50658476-50664613:-|nuORF	25.57405402267927	0.6709832231498071	4				NaN	NaN	0	NaN	3034	2546	5577
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5583	18.28	NaN	2593.7	30	0	270.34	0.036	+			30630	QASREAPAQR	10	70	557.2940637057513	NaN	0	557.3533935546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QASREAPAQR_	ENSG00000168754|ENST00000490605|FAM178B;FAM178B|p.A733Gfs*2|1|0.12|ENSG00000168754|chr2:96893950-96893951|-/T|frameshift_variant;FAM178B|p.G341Afs*92|1|0.45|ENSG00000168754|chr2:96970764-96970764|C/-|frameshift_variant;FAM178B|p.K398Sfs*35|1|0.13|ENSG00000168754|chr2:96960426-96960426|T/-|frameshift_variant	44.377184641726394	0.34115073642966565	4				NaN	NaN	0	NaN	3035	2546	5577
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5584	18.28	NaN	8414.6	30	0	1026.3	0.14				-1	 	0	70	485.7653072149159	969.5160614966318	2	485.7659606933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3036	2546	5577
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5602	18.319	NaN	104880	30	0	27657	0.152				-1	 	0	71	369.8922034586754	1106.6547809762262	3	369.892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3051	2549	5601
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5603	18.322	NaN	68295	30	0	9514.1	0.106				-1	 	0	82	572.3266908401719	1142.6388287471436	2	572.327880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3052	2549	5601
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5604	18.324	NaN	162170	30	0	24997	0.106				-1	 	0	107	524.7739971129403	1047.5334412926804	2	524.7750244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3053	2549	5601
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5605	18.326	NaN	76637	30	0	24779	0.106				-1	 	0	91	353.2164565838794	1056.6275403518382	3	353.2170104980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3054	2549	5601
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5606	18.328	NaN	155120	30	0	56788	0.106				-1	 	0	110	350.1850597546655	1047.5333498641965	3	350.1856689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3055	2549	5601
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5607	18.329	NaN	17933	30	0	5040.4	0.106	+			49304	VVQRVEIHK	9	77	554.3347981585977	1106.6550433839952	2	554.3356323242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VVQRVEIHK_	ENSG00000213977|ENST00000225525|TAX1BP3	80.45461616416974	0.09558281504443908	4				NaN	NaN	0	NaN	3056	2549	5601
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5608	18.331	NaN	57050	30	0	9247.4	0.036	+			19229	KAAKELELR	9	111	529.3212593281469	1056.6279657230937	2	529.322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KAAKELELR_	tr|U7SFT1|U7SFT1_FUSNUDNA3'-5'helicaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02223PE=3SV=1	106.68306549817024	0.032382560583716295	4				NaN	NaN	0	NaN	3057	2549	5601
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5609	18.332	NaN	22300	30	0	7430.2	0.145	+			20182	KEKYEKDIAA	10	72	398.8834020341069	1193.6283767025207	3	398.88372802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_KEKYEKDIAA_	ENSG00000164104|ENST00000296503|HMGB2;ENSG00000189403|ENST00000341423|HMGB1;ENST00000502313.1_1_5:77940194-77940227:-|nuORF;ENST00000522557.1_1_20:56063450-56063633:-|nuORF;nc|ENSG00000124097|B2RPK0|HMGB1P1	36.446750945000026	0.5818864909973037	4				NaN	NaN	0	NaN	3058	2549	5601
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5627	18.371	NaN	38104	30	0	10248	0.193				-1	 	0	68	464.19310678923136	926.3716606452628	2	464.193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3073	2552	5626
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5628	18.374	NaN	98081	30	0	13547	0.106			+	9055	EGGGDDRQGW	10	104	538.7227666187746	1075.430980304349	2	538.7239990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EGGGDDRQGW_	REV__CON__ENSEMBL:ENSBTAP00000018574	63.53385203322761	0.33370026130094593	4				NaN	NaN	0	NaN	3074	2552	5626
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5629	18.376	NaN	9647.6	30	0	1962.6	0.106	+			5176	ATTGKILEK	9	74	480.78958904155456	NaN	0	480.7896423339844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATTGKILEK_	ENSG00000115827|ENST00000375255|DCAF17;ENST00000468592.5_1_2:172300063-172325523:+|nuORF;ENST00000480855.1_1_2:172299988-172306494:+|nuORF	63.42647028704847	0.13470499157941143	4				NaN	NaN	0	NaN	3075	2552	5626
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5630	18.378	NaN	20664	30	0	1693	0.106	+			21490	KNKPSKSNK	9	93	515.8030455940439	1029.5915382548876	2	515.8037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KNKPSKSNK_	ENSG00000164190|ENST00000282516|NIPBL;ENST00000504430.5_1_5:36961623-36995905:+|nuORF;nc|ENSG00000164190|Q6KC79-2|NIPBL;nc|ENSG00000164190|Q6KC79-3|NIPBL;NIPBL|p.F1423Lfs*15|1|0.43|ENSG00000164190|chr5:37008032-37008032|T/-|frameshift_variant;NIPBL|p.I2776Lfs*3|1|0.17|ENSG00000164190|chr5:37064797-37064797|A/-|frameshift_variant;NIPBL|p.L2220Ffs*3|1|0.21|ENSG00000164190|chr5:37048567-37048568|-/T|frameshift_variant	65.46538089061403	0.16805504838372562	4				NaN	NaN	0	NaN	3076	2552	5626
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5631	18.38	NaN	30493	30	0	7340.6	0.106			+	38317	SRDSIKLQ	8	93	473.7693509174862	945.5241489017724	2	473.7690734863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SRDSIKLQ_	REV__ENSG00000109689|ENST00000467087|STIM2;REV__nc|ENSG00000109689|Q9P246-2|STIM2;REV__nc|ENSG00000109689|Q9P246-3|STIM2;REV__STIM2|p.H411Tfs*13|1|0.38|ENSG00000109689|chr4:27008508-27008508|C/-|frameshift_variant;REV__STIM2|p.H537Tfs*64|2|0.26|ENSG00000109689|chr4:27017825-27017825|C/-|frameshift_variant;REV__STIM2|p.S735Lfs*9|1|0.08|ENSG00000109689|chr4:27022958-27022959|-/TGTA|frameshift_variant	79.45101966838831	0.3281480470254892	4				NaN	NaN	0	NaN	3077	2552	5626
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5632	18.382	NaN	6142.1	30	0	905.99	0.106			+	29619	PGAGRALL	8	58	377.73179191227894	753.4490308913579	2	377.7320251464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PGAGRALL_	REV__ENSG00000185915|ENST00000379499|KLHL34;REV__KLHL34|p.R288Afs*7|3|0.44|ENSG00000185915|chrX:21656928-21656928|C/-|frameshift_variant	39.021493756699265	0.6623843612266921	4				NaN	NaN	0	NaN	3078	2552	5626
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5633	18.383	NaN	2321.2	30	0	503.63	0.035	+			4768	ATNDSVVADK	10	64	510.25332859917347	1018.492104265147	2	510.2538757324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATNDSVVADK_	ENSG00000205220|ENST00000358514|PSMB10;ENST00000575556.1_1_16:67970119-67970555:-|nuORF	54.00501255817391	0.42036390322784395	4				NaN	NaN	0	NaN	3079	2552	5626
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5651	18.421	NaN	393250	30	0	116620	0.145				-1	 	0	90	474.2607750369539	946.5069971407078	2	474.2610778808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3094	2555	5650
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5652	18.424	NaN	27244	30	0	1970.3	0.106	+			49544	VYAQKHQQL	9	84	557.8042117041422	NaN	0	557.8042602539062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYAQKHQQL_	ENSG00000197323|ENST00000358465|TRIM33;nc|ENSG00000197323|Q9UPN9-2|TRIM33;TRIM33|p.L700Efs*5|1|0.07|ENSG00000197323|chr1:114410281-114410282|-/CAGAATTCTCC|frameshift_variant	101.60071028292904	0.0182107634719595	4				NaN	NaN	0	NaN	3095	2555	5650
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5653	18.426	NaN	24250	30	0	2423	0.106	+			13781	GQGVNNVPK	9	86	456.74825167611715	911.4819504190343	2	456.74822998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GQGVNNVPK_	ENSG00000179119|ENST00000336349|SPTY2D1;ENST00000536336.5_1_11:18633859-18655855:-|nuORF;nc|ENSG00000179119|Q68D10-2|SPTY2D1;nc|ENSG00000179119|Q68D10-3|SPTY2D1;SPTY2D1|p.P485Rfs*12|1|0.3|ENSG00000179119|chr11:18614820-18614820|G/-|frameshift_variant	104.74654710444128	0.034358562718640136	4				NaN	NaN	0	NaN	3096	2555	5650
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5654	18.427	NaN	7307.9	30	0	1538.4	0.106	+			22045	KSIQSGPLK	9	66	479.28927790052785	956.5640028678557	2	479.28985595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KSIQSGPLK_	ENSG00000132305|ENST00000410111|IMMT;ENST00000474969.5_1_2:86385703-86422514:-|nuORF;ENST00000486633.1_1_2:86400704-86422514:-|nuORF;nc|ENSG00000132305|Q16891-2|IMMT;nc|ENSG00000132305|Q16891-3|IMMT;nc|ENSG00000132305|Q16891-4|IMMT	68.84614121027924	0.14577793175421136	4				NaN	NaN	0	NaN	3097	2555	5650
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5655	18.429	NaN	28375	30	0	7407.4	0.106			+	47278	VMVFYCPL	8	76	486.23987798208657	970.4652030309732	2	486.2401428222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VMVFYCPL_	REV__ENSG00000109762|ENST00000652585|SNX25;REV__ENST00000504959.5_1_4:186260544-186290945:+|nuORF;REV__GALNT7-SNX25|1|fusion;REV__nc|ENSG00000109762|Q9H3E2-2|SNX25;REV__nc|ENSG00000109762|Q9H3E2|SNX25	43.626045697637714	0.6338121648150432	4				NaN	NaN	0	NaN	3098	2555	5650
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5656	18.431	NaN	5802.6	30	0	969.61	0.106	+			8556	EAVSPERL	8	61	450.7420027989445	899.469452664689	2	450.74261474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EAVSPERL_	ENSG00000161021|ENST00000292599|MAML1;MAML1|p.A378Qfs*63|1|0.17|ENSG00000161021|chr5:179766137-179766137|C/-|frameshift_variant;MAML1|p.L161Sfs*23|1|0.31|ENSG00000161021|chr5:179765486-179765486|C/-|frameshift_variant;MAML1|p.P424Rfs*17|1|0.25|ENSG00000161021|chr5:179766278-179766278|C/-|frameshift_variant	47.91560031466742	0.6071945918984287	4				NaN	NaN	0	NaN	3099	2555	5650
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5657	18.433	NaN	22207	30	0	5296.1	0.036	+			20153	KEKQDKVVL	9	79	543.8285422358518	1085.6425315385036	2	543.8300170898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KEKQDKVVL_	ENSG00000105738|ENST00000222345|SIPA1L3;ENST00000596403.1_1_19:38694578-38696877:+|nuORF	112.10723106719422	0.02684780151337622	4				NaN	NaN	0	NaN	3100	2555	5650
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5675	18.47	NaN	75906	30	0	19864	0.214				-1	 	0	98	446.2296025628348	890.4446521924697	2	446.2298278808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3115	2558	5674
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5676	18.473	NaN	25876	30	0	6905.6	0.106	+			5911	AVLDKVKTK	9	83	501.3206921202512	1000.6268313073024	2	501.3210754394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVLDKVKTK_	ENSG00000051382|ENST00000674063|PIK3CB;PIK3CB|p.T930Lfs*62|1|0.47|ENSG00000051382|chr3:138663914-138663914|T/-|frameshift_variant	173.39201167336012	0.002187917786942103	4				NaN	NaN	0	NaN	3116	2558	5674
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5677	18.475	NaN	50131	30	0	12163	0.106				-1	 	0	73	376.18992822014184	750.3653035070837	2	376.190185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3117	2558	5674
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5678	18.477	NaN	42174	30	0	6870.3	0.106	+			1270	AESGRGQVM	9	81	467.72450189755125	933.4344508619025	2	467.72393798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AESGRGQVM_	ENSG00000008517|ENST00000525643|IL32;nc|ENSG00000008517|P24001-3|IL32;nc|ENSG00000008517|P24001-4|IL32;nc|ENSG00000008517|P24001|IL32	82.24051045832904	0.08786059719216216	4				NaN	NaN	0	NaN	3118	2558	5674
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5679	18.479	NaN	5685.4	30	0	649.91	0.106			+	19652	KDLLELEKK	9	73	558.337167546807	1114.659782160414	2	558.3380737304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KDLLELEKK_	REV__tr|U7SED7|U7SED7_FUSNUCoproporphyrinogendehydrogenaseHemZOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02333PE=4SV=1	53.08895987439943	0.27122541748218487	4				NaN	NaN	0	NaN	3119	2558	5674
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5680	18.481	NaN	8297.9	30	0	1812.3	0.036				-1	 	0	68	360.21268206154707	1077.6162167848413	3	360.2132263183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3120	2558	5674
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5681	18.481	NaN	3694.2	30	0	397.62	0.141	+			21542	KNSTLDLINL	10	74	565.8244277941121	1129.6343026550242	2	566.3038330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KNSTLDLINL_	ENSG00000188452|ENST00000410087|CERKL;nc|ENSG00000188452|Q49MI3-3|CERKL;nc|ENSG00000188452|Q49MI3-4|CERKL;nc|ENSG00000188452|Q49MI3-5|CERKL;nc|ENSG00000188452|Q49MI3-7|CERKL;nc|ENSG00000188452|Q49MI3-8|CERKL;nc|ENSG00000188452|Q49MI3-9|CERKL;nc|ENSG00000188452|Q49MI3|CERKL	58.2462437865262	0.38179041844353556	4				NaN	NaN	0	NaN	3121	2558	5674
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5699	18.521	NaN	171720	30	0	39993	0.215	+			34931	SAAGHVLVK	9	107	441.2633538158314	880.5121546984628	2	441.26348876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAAGHVLVK_	ENSG00000183508|ENST00000369448|TENT5C	143.8867514904718	0.008656634767784652	4				NaN	NaN	0	NaN	3136	2561	5698
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5700	18.524	NaN	8576	30	0	725.05	0.106	+			39364	STCQRFVEK	9	78	577.7837333941783	1153.5529138551565	2	577.784912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_STC(Carbamidomethyl (C))QRFVEK_	ENSG00000181610|ENST00000313608|MRPS23	76.16968421966216	0.11411088698345859	4				NaN	NaN	0	NaN	3137	2561	5698
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5701	18.526	NaN	32444	30	0	7184.8	0.106				-1	 	0	78	414.73738668465523	827.4602204361105	2	414.73773193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3138	2561	5698
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5702	18.528	NaN	27320	30	0	21367	0.106				-1	 	0	60	424.22905929111755	846.4435656490351	2	424.2293701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3139	2561	5698
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5703	18.53	NaN	12963	30	0	3846.2	0.106	+			48470	VTLRCWTP	8	77	488.2582244213585	974.501895909517	2	488.258544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTLRCWTP_	ENSG00000248385|ENST00000432826|TARM1;nc|ENSG00000248385|B6A8C7-2|TARM1	45.9519527083369	0.6193794311207887	4				NaN	NaN	0	NaN	3140	2561	5698
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5704	18.532	NaN	12740	30	0	1844.4	0.036	+			22384	KTIEQSLLE	9	77	530.8001280724859	1059.5857032117717	2	531.3018798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KTIEQSLLE_	ENSG00000130363|ENST00000367069|RSPH3;nc|ENSG00000130363|Q86UC2-2|RSPH3;nc|ENSG00000130363|Q86UC2|RSPH3	76.16968421966216	0.11411088698345859	4				NaN	NaN	0	NaN	3141	2561	5698
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5705	18.532	NaN	12558	30	0	7946.1	0.139	+			32428	QVIAGAVHK	9	64	461.7764879606553	921.5384229881106	2	461.77679443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QVIAGAVHK_	ENSG00000165943|ENST00000298894|MOAP1	116.90359126533652	0.02307425081617795	4				NaN	NaN	0	NaN	3142	2561	5698
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5723	18.571	NaN	131790	30	0	23340	0.214	+			48594	VTQSEIAQK	9	106	502.27410787206327	1002.5336628109266	2	502.2745056152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTQSEIAQK_	ENSG00000197702|ENST00000334956|PARVA;ENST00000533345.5_1_11:12419899-12534890:+|nuORF	251.5565004879006	1.1402702076691379E-19	4				NaN	NaN	0	NaN	3157	2564	5722
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5724	18.575	NaN	19493	30	0	3210.1	0.106	+			40940	SVFSQSGNSR	10	81	534.7564357941146	1067.4983186550292	2	534.7575073242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVFSQSGNSR_	CDC27|p.I404Sfs*15|1|0.44|ENSG00000004897|chr17:47142397-47142397|T/-|frameshift_variant;CDC27|p.P360Lfs*7|1|0.33|ENSG00000004897|chr17:47143976-47143977|-/AATTTAAA|frameshift_variant;ENSG00000004897|ENST00000066544|CDC27;ENST00000525495.6_2_17:45219385-45266538:-|nuORF;ENST00000533415.5_1_17:45198303-45266605:-|nuORF;nc|ENSG00000004897|P30260-2|CDC27	58.2462437865262	0.38179041844353556	4				NaN	NaN	0	NaN	3158	2564	5722
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5725	18.577	NaN	12657	30	0	2166.8	0.106	+			14306	GSYESTLKK	9	65	506.7685444673376	1011.5225360014753	2	506.7690124511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GSYESTLKK_	ENSG00000184898|ENST00000331426|RBM43	107.00750918261382	0.032051501805654005	4				NaN	NaN	0	NaN	3159	2564	5722
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5726	18.579	NaN	4324.4	30	0	526.55	0.106	+			16534	HEVKKVTL	8	65	477.2920283610721	952.5695037889442	2	477.29241943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HEVKKVTL_	ENSG00000100813|ENST00000605057|ACIN1;nc|ENSG00000100813|Q9UKV3-2|ACIN1;nc|ENSG00000100813|Q9UKV3-3|ACIN1;nc|ENSG00000100813|Q9UKV3-5|ACIN1;nc|ENSG00000100813|Q9UKV3|ACIN1	95.81516180277367	0.2598660847282228	4				NaN	NaN	0	NaN	3160	2564	5722
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5727	18.58	NaN	6923.9	30	0	832.83	0.106	+			1257	AERVKQENL	9	75	543.7980681793094	1085.5815834254188	2	543.7991333007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AERVKQENL_	ENSG00000153574|ENST00000283646|RPIA	88.17693792209575	0.07000514020414955	4				NaN	NaN	0	NaN	3161	2564	5722
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5728	18.582	NaN	10855	30	0	2553.7	0.035	+			48633	VTSKVLTTK	9	78	488.8049189071975	975.595284881195	2	488.8053894042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTSKVLTTK_	ENSG00000167632|ENST00000438773|TRAPPC9;ENST00000521667.5_1_8:140743306-141301208:-|nuORF;nc|ENSG00000167632|Q96Q05-2|TRAPPC9;nc|ENSG00000167632|Q96Q05-3|TRAPPC9	89.02883481214508	0.06760336634167786	4				NaN	NaN	0	NaN	3162	2564	5722
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5729	18.583	NaN	7396.8	30	0	892.34	0.141	+			39480	STFESKSYK	9	75	538.765930818002	1075.5173087028038	2	538.7669677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STFESKSYK_	ENSG00000171560|ENST00000403106|FGA;nc|ENSG00000171560|P02671|FGA	72.87924865735499	0.12833875048249987	4				NaN	NaN	0	NaN	3163	2564	5722
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5747	18.621	NaN	49119	30	0	11191	0.185				-1	 	0	88	580.8113186478497	1159.6080843624993	2	580.8121948242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3178	2567	5746
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5748	18.624	NaN	36750	30	0	12797	0.106	+			5123	ATSSTLVSK	9	76	447.25002526192907	892.4854975906582	2	447.2503356933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATSSTLVSK_	ENST00000332782.6_1_12:57640633-57642538:-|nuORF	124.08010499294276	0.018729767491916592	4				NaN	NaN	0	NaN	3179	2567	5746
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5749	18.626	NaN	14285	30	0	3156.6	0.106	+			3430	ASQKVYAMK	9	81	513.2752645684485	1024.535976203697	2	513.2760009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASQKVYAMK_	ENSG00000134318|ENST00000315872|ROCK2;ROCK2|p.K1351Sfs*17|1|0.34|ENSG00000134318|chr2:11192259-11192259|T/-|frameshift_variant;ROCK2|p.S684Afs*5|1|0.34|ENSG00000134318|chr2:11211834-11211834|T/-|frameshift_variant	47.95952297671804	0.32689736945648856	4				NaN	NaN	0	NaN	3180	2567	5746
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5750	18.628	NaN	11234	30	0	3154.4	0.106	+			2173	ALMEKFKKK	9	60	374.89432367899576	1121.6611416371873	3	374.8948059082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ALMEKFKKK_	ENSG00000145779|ENST00000504771|TNFAIP8;ENST00000415806.2_1_5:118727135-118729073:+|nuORF;nc|ENSG00000145779|O95379-2|TNFAIP8;nc|ENSG00000145779|O95379-3|TNFAIP8;nc|ENSG00000145779|O95379-4|TNFAIP8	37.81151784470057	0.4459294069877048	4				NaN	NaN	0	NaN	3181	2567	5746
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5751	18.63	NaN	7580.3	30	0	2220.7	0.106			+	21368	KMEPNNTIGL	10	75	558.7889251056741	1115.5632972781482	2	558.7899780273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KMEPNNTIGL_	REV__ENSG00000187612|ENST00000344514|OR5W2	63.53385203322761	0.33370026130094593	4				NaN	NaN	0	NaN	3182	2567	5746
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5752	18.632	NaN	6763.5	30	0	1133.5	0.106	+			18944	IVNRGITPK	9	71	499.31069217588265	996.6068314185653	2	499.3111267089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IVNRGITPK_	ENSG00000135241|ENST00000257694|PNPLA8;nc|ENSG00000135241|Q9NP80-3|PNPLA8;PNPLA8|p.T757Qfs*10|1|0.38|ENSG00000135241|chr7:108472481-108472481|T/-|frameshift_variant	88.17693792209575	0.07000514020414955	4				NaN	NaN	0	NaN	3183	2567	5746
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5753	18.634	NaN	12961	30	0	2456.8	0.038			+	43325	TGASNTRPWGL	11	80	387.19983698651896	1158.577681559757	3	387.19989013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TGASNTRPWGL_	REV__ENST00000470525.1_1_3:48452064-48453367:-|nuORF	23.37791116691581	0.7445759747191538	4				NaN	NaN	0	NaN	3184	2567	5746
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5771	18.671	NaN	125930	30	0	21553	0.197				-1	 	0	107	363.86572524531704	1088.5753463361511	3	363.8661193847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3199	2570	5770
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5772	18.674	NaN	57210	30	0	13432	0.106	+			3336	ASMPDNTAAQK	11	91	567.2654609163344	1132.5163688994687	2	567.2669677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASMPDNTAAQK_	ENSG00000100345|ENST00000216181|MYH9;ENSG00000133392|ENST00000300036|MYH11;MYH9|p.I784*|1|0.07|ENSG00000100345|chr22:36304036-36304036|G/-|frameshift_variant;nc|ENSG00000100345|P35579-2|MYH9;nc|ENSG00000133392|P35749-2|MYH11;nc|ENSG00000133392|P35749-3|MYH11;nc|ENSG00000133392|P35749-4|MYH11	153.1020116777495	6.534671767362118E-05	4				NaN	NaN	0	NaN	3200	2570	5770
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5773	18.677	NaN	24317	30	0	6870.9	0.106			+	44858	TTTVEKTK	8	76	454.2578692041743	906.5011854751486	2	454.2580871582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TTTVEKTK_	REV__ENSG00000106086|ENST00000449726|PLEKHA8;REV__ENST00000256692.5_1_12:45566975-45568244:-|nuORF;REV__ENST00000498106.1_1_7:30085848-30088836:+|nuORF;REV__nc|ENSG00000106086|Q96JA3-2|PLEKHA8;REV__nc|ENSG00000106086|Q96JA3-3|PLEKHA8;REV__nc|ENSG00000293316|O95397|PLEKHA8P1	60.97194046774394	0.49215940876911696	4				NaN	NaN	0	NaN	3201	2570	5770
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5774	18.678	NaN	10648	30	0	4522	0.106				-1	 	0	61	334.7635862373176	667.5126195414352	2	334.7640075683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3202	2570	5770
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5775	18.68	NaN	13347	30	0	3157.2	0.106	+			3661	ASYLADKKK	9	77	512.294502449459	1022.5744519657179	2	512.2950439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASYLADKKK_	ENSG00000179562|ENST00000321407|GCC1;GCC1|p.T633Afs*8|1|0.05|ENSG00000179562|chr7:127582446-127582447|-/CA|frameshift_variant	69.6276240434122	0.14239879520340665	4				NaN	NaN	0	NaN	3203	2570	5770
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5776	18.682	NaN	49925	30	0	17305	0.106	+			14480	GTCGKSLISK	10	96	525.7832698230659	1049.5519867129317	2	525.7843627929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_GTC(Carbamidomethyl (C))GKSLISK_	ENSG00000118322|ENST00000327245|ATP10B	162.63603312974413	0.006026810256601855	4				NaN	NaN	0	NaN	3204	2570	5770
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5777	18.684	NaN	12056	30	0	1674.3	0.038	+			46266	VEHEKQRIL	9	74	384.5554783510241	1150.6446056532723	3	384.55584716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VEHEKQRIL_	ENSG00000204616|ENST00000376734|TRIM31;nc|ENSG00000204616|Q9BZY9-2|TRIM31	35.15202426646627	0.4747332964206883	4				NaN	NaN	0	NaN	3205	2570	5770
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5795	18.721	NaN	27665	30	0	7007.7	0.215				-1	 	0	69	464.19310678923136	926.3716606452628	2	464.1934509277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3220	2573	5794
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5796	18.725	NaN	26787	30	0	4592.5	0.106	+			47948	VSMGHSISK	9	94	473.2441357440517	944.4737185549034	2	473.2444152832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSMGHSISK_	ENSG00000186017|ENST00000452939|ZNF566;ZNF566|p.F128Lfs*25|1|0.12|ENSG00000186017|chr19:36449850-36449850|A/-|frameshift_variant;ZNF566|p.P52Q|1|0.3|ENSG00000186017|chr19:36472988-36472988|G/T|missense_variant	83.6470233535746	0.08277643980271215	4				NaN	NaN	0	NaN	3221	2573	5794
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5797	18.727	NaN	13352	30	0	4140	0.106			+	-1	TVMRVTIGAS	10	73	350.8579471931383	1049.5520121796148	3	350.8585510253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_TVM(Oxidation (M))RVTIGAS_	REV__ATP2B1|p.R699S|1|0.33|ENSG00000070961|chr12:89611343-89611343|C/A|missense_variant	42.33807565288922	0.5276008846745733	4				NaN	NaN	0	NaN	3222	2573	5794
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5798	18.729	NaN	12176	30	0	2007.3	0.106	+			40574	SVAEHPLSR	9	80	498.2669222681573	994.5192916031147	2	498.2669677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVAEHPLSR_	ENSG00000142207|ENST00000382751|URB1;URB1|p.R2106W|1|0.08|ENSG00000142207|chr21:32316784-32316784|G/A|missense_variant	98.58198989935565	0.04066992115528678	4				NaN	NaN	0	NaN	3223	2573	5794
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5799	18.731	NaN	10862	30	0	1158.6	0.106	+			17660	IEKKATATI	9	75	487.7973315680466	973.5801102028933	2	487.7973327636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IEKKATATI_	ENSG00000084463|ENST00000261167|WBP11;ENST00000412499.1_1_2:128007051-128007162:+|nuORF	114.8945686534367	0.024290463251177924	4				NaN	NaN	0	NaN	3224	2573	5794
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5800	18.732	NaN	89723	30	0	29427	0.035			+	51519	YVSAQRLIG	9	89	503.78723234379197	1005.559911754384	2	503.78741455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YVSAQRLIG_	REV__FBXW7|p.V485Ffs*13|1|0.25|ENSG00000109670|chr4:152326197-152326197|C/-|frameshift_variant	51.33545320467046	0.2872990594074956	4				NaN	NaN	0	NaN	3225	2573	5794
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5801	18.733	NaN	9621.9	30	0	2027.2	0.138	+			4345	ATGPALDNK	9	74	443.7347023827147	885.4548518322295	2	443.73486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATGPALDNK_	ENSG00000196576|ENST00000359337|PLXNB2;PLXNB2|p.G308Vfs*83|1|0.39|ENSG00000196576|chr22:50289664-50289664|G/-|frameshift_variant;PLXNB2|p.G872Vfs*42|1|0.08|ENSG00000196576|chr22:50283401-50283401|C/-|frameshift_variant;PLXNB2|p.L1362Rfs*32|1|0.1|ENSG00000196576|chr22:50280578-50280579|CA/-|frameshift_variant;PLXNB2|p.V873Cfs*66|1|0.2|ENSG00000196576|chr22:50283400-50283401|-/C|frameshift_variant;PLXNB2|p.V928Cfs*3|1|0.71|ENSG00000196576|chr22:50283084-50283084|C/-|frameshift_variant	109.47833844074708	0.029530294723441826	4				NaN	NaN	0	NaN	3226	2573	5794
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5819	18.771	NaN	10161000	30	0	3683700	0.045	+			2989	ASFDKAKLK	9	89	504.2975271769007	1006.5805014206014	2	504.2994384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASFDKAKLK_	ENSG00000034510|ENST00000233143|TMSB10	168.25843898104137	0.0030641937004078144	4				NaN	NaN	0	NaN	3241	2576	5818
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5820	18.772	NaN	9078400	30	0	1584200	0.073	+			3333	ASMKKVKSL	9	86	336.53452294941934	NaN	0	336.5347900390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_ASM(Oxidation (M))KKVKSL_	ENST00000369426.9_1_1:119575536-119588262:-|nuORF	45.97224482568171	0.23445038899310136	4				NaN	NaN	0	NaN	3242	2576	5818
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5821	18.773	NaN	257050	30	0	82105	0.047			+	28480	NGFLAVKIQ	9	122	330.53034496033183	988.5692054811955	3	330.5310363769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NGFLAVKIQ_	REV__ENSG00000187021|ENST00000358834|PNLIPRP1	45.9519527083369	0.35044536499095585	4				NaN	NaN	0	NaN	3243	2576	5818
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5822	18.774	NaN	456570	30	0	189190	0.106	+			36512	SFDKAKLK	8	105	468.778932102356	935.543311271512	2	468.7793273925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SFDKAKLK_	CON__P21752;ENSG00000034510|ENST00000233143|TMSB10	139.97047562133406	0.25797680915057813	4				NaN	NaN	0	NaN	3244	2576	5818
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5823	18.776	NaN	58263	30	0	28447	0.106	+			14442	GTATTMVSK	9	75	448.2312670554733	NaN	0	448.2313537597656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTATTMVSK_	ENSG00000204217|ENST00000374580|BMPR2	150.36159442982594	0.0026033977239465623	4				NaN	NaN	0	NaN	3245	2576	5818
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5824	18.778	NaN	181690	30	0	79696	0.106	+			51459	YVGAAKLK	8	108	425.26277234426806	848.5109917553361	2	425.2633972167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YVGAAKLK_	ENSG00000100938|ENST00000399440|GMPR2;ENSG00000137198|ENST00000259727|GMPR;ENST00000543191.5_1_6:16258277-16295414:+|nuORF;ENST00000544145.1_1_6:16289789-16295414:+|nuORF;nc|ENSG00000100938|Q9P2T1-2|GMPR2;nc|ENSG00000100938|Q9P2T1-3|GMPR2	88.64286706044652	0.2815785716369046	4				NaN	NaN	0	NaN	3246	2576	5818
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5825	18.779	NaN	15571	30	0	3431	0.106	+			43371	TGELKVSRGL	10	76	353.8768310546875	NaN	0	353.8768310546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TGELKVSRGL_	ENST00000463007.5_1_2:240011659-240219867:-|nuORF	34.172542307311794	0.38797011891751465	4				NaN	NaN	0	NaN	3247	2576	5818
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5826	18.781	NaN	15761	30	0	5448.4	0.106	+			43177	TETQEKNTL	9	87	532.2672729492188	NaN	0	532.2672729492188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_TETQEKNTL_	CON__P21752;ENSG00000034510|ENST00000233143|TMSB10;ENST00000415070.1_1_2:236791008-236791086:-|nuORF	154.1183686248401	0.005714644813043012	4				NaN	NaN	0	NaN	3248	2576	5818
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5827	18.783	NaN	17795	30	0	6479.2	0.036			+	32458	QVLAKLAKR	9	85	342.8975830078125	NaN	0	342.8975830078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	9	Unmodified	_QVLAKLAKR_	REV__ENST00000419303.5_1_22:22348995-22398182:-|nuORF	30.317721548370564	0.32449924987115025	4				NaN	NaN	0	NaN	3249	2576	5818
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5856	18.844	NaN	20383	30	0	3950	0.214	+			22409	KTKDNILAK	9	87	515.8159607166526	1029.6173685001052	2	515.816650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTKDNILAK_	tr|U7SZ64|U7SZ64_FUSNUYhcGPDDEXKnucleasedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00860PE=4SV=1	80.45461616416974	0.09558281504443908	4				NaN	NaN	0	NaN	3272	2582	5855
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5857	18.847	NaN	11108	30	0	1244.2	0.106			+	30677	QCCRWVNEG	9	75	547.7290279518869	NaN	0	547.7290649414062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QCCRWVNEG_	REV__ENSG00000141750|ENST00000333461|STAC2;REV__nc|ENSG00000141750|Q6ZMT1-2|STAC2	63.30626980617807	0.13521764763214936	4				NaN	NaN	0	NaN	3273	2582	5855
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5858	18.849	NaN	39913	30	0	9559.6	0.106	+			3729	ATAAVSSMK	9	75	433.22553588873154	864.4365188442631	2	433.2259216308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATAAVSSMK_	ADD3-MXI1|1|fusion;ENSG00000148700|ENST00000356080|ADD3;nc|ENSG00000148700|Q9UEY8-2|ADD3	172.24860141594272	0.002383092361811508	4				NaN	NaN	0	NaN	3274	2582	5855
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5859	18.851	NaN	32836	30	0	8017.9	0.106			+	-1	SNEQPCYGL	9	92	534.227759668883	1066.4409664045659	2	534.2291870117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_SNEQPC(Carbamidomethyl (C))YGL_	REV__ENSG00000154263|ENST00000690296|ABCA10;REV__ENST00000519732.5_1_17:67144970-67171813:-|nuORF;REV__ENST00000522406.5_1_17:67144970-67178294:-|nuORF;REV__nc|ENSG00000154263|Q8WWZ4-2|ABCA10	60.97194046774394	0.20551255781574032	4				NaN	NaN	0	NaN	3275	2582	5855
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5860	18.853	NaN	9730.9	30	0	2129.1	0.106				-1	QQVLAMLK	8	85	473.7726796449857	945.5308063567714	2	473.77105712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_QQVLAM(Oxidation (M))LK_	ENSG00000178177|ENST00000635767|LCORL	57.81127852772723	0.5234495074909924	4				NaN	NaN	0	NaN	3276	2582	5855
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5861	18.855	NaN	9011.5	30	0	983.03	0.036	+			4757	ATNAAAQNAIK	11	81	536.7919329401341	NaN	0	536.792236328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATNAAAQNAIK_	ENSG00000137076|ENST00000314888|TLN1;ENSG00000171914|ENST00000636159|TLN2;nc|ENSG00000137076|Q9Y490-2|TLN1;TLN1|p.P1628Rfs*20|1|0.44|ENSG00000137076|chr9:35707144-35707144|G/-|frameshift_variant	128.3478880297481	0.00031537782518006044	4				NaN	NaN	0	NaN	3277	2582	5855
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5862	18.856	NaN	8407.8	30	0	1269.4	0.14	+			42281	TADPSHQTM	9	78	494.21313570868074	986.4117184841615	2	494.2138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TADPSHQTM_	ENSG00000196141|ENST00000409140|SPATS2L;nc|ENSG00000196141|Q9NUQ6-2|SPATS2L;nc|ENSG00000196141|Q9NUQ6-3|SPATS2L;nc|ENSG00000196141|Q9NUQ6-4|SPATS2L	87.69643885390035	0.07135982304947239	4				NaN	NaN	0	NaN	3278	2582	5855
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5880	18.893	NaN	69217	30	0	13961	0.214	+			4998	ATSAFQTQK	9	97	491.253391935107	980.492230937014	2	491.25390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSAFQTQK_	ENSG00000139687|ENST00000267163|RB1;RB1|p.V654Cfs*4|1|0.33|ENSG00000139687|chr13:48456343-48456343|A/-|frameshift_variant	199.8913184727681	3.377773596966937E-05	4				NaN	NaN	0	NaN	3293	2585	5879
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5881	18.897	NaN	24225	30	0	3880	0.106			+	43674	TKDCEKCK	8	77	477.72235621085025	953.4301594885005	2	477.7228698730469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TKDCEKCK_	REV__ENSG00000167232|ENST00000300619|ZNF91;REV__nc|ENSG00000167232|Q05481-2|ZNF91;REV__ZNF91|p.F695L|1|0.1|ENSG00000167232|chr19:23360896-23360896|A/G|missense_variant;REV__ZNF91|p.K749*|1|0.1|ENSG00000167232|chr19:23360734-23360735|-/TA|frameshift_variant;REV__ZNF91|p.P685L|1|0.22|ENSG00000167232|chr19:23360925-23360925|G/A|missense_variant	66.42927471994793	0.4381325844043345	4				NaN	NaN	0	NaN	3294	2585	5879
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5882	18.899	NaN	23848	30	0	3215.2	0.106	+			40094	STNSPVGVSK	10	87	488.25867482269905	974.5027967121981	2	488.2591247558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STNSPVGVSK_	ENSG00000165671|ENST00000439151|NSD1;nc|ENSG00000165671|Q96L73-2|NSD1;nc|ENSG00000165671|Q96L73-3|NSD1;NSD1|p.K1753Sfs*10|1|0.17|ENSG00000165671|chr5:177267669-177267669|A/-|frameshift_variant	90.14881205920913	0.1302219035121668	4				NaN	NaN	0	NaN	3295	2585	5879
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5883	18.901	NaN	8693.7	30	0	1407	0.106			+	36919	SIIVKRYGK	9	67	355.22577196636655	NaN	0	355.2257995605469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SIIVKRYGK_	REV__ENSG00000005100|ENST00000225296|DHX33;REV__ENST00000575153.5_1_17:5347527-5364435:-|nuORF;REV__nc|ENSG00000005100|Q9H6R0-2|DHX33	31.529811441608018	0.3183796599642538	4				NaN	NaN	0	NaN	3296	2585	5879
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5884	18.903	NaN	8981.1	30	0	991.95	0.106	+			19986	KEIDKEEHL	9	77	570.7980730536686	1139.5815931741372	2	570.7992553710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEIDKEEHL_	ENSG00000154545|ENST00000471932|MAGED4;ENSG00000179222|ENST00000326587|MAGED1;ENSG00000187243|ENST00000335504|MAGED4B;ENST00000470594.5_1_X:51805328-51809606:-|nuORF;ENST00000479281.5_1_X:51931784-51932886:+|nuORF;ENST00000485420.5_1_X:51636757-51640983:+|nuORF;ENST00000494718.5_1_X:51640434-51640983:+|nuORF;MAGED1|p.P628Rfs*18|1|0.09|ENSG00000179222|chrX:51900215-51900215|C/-|frameshift_variant;nc|ENSG00000179222|Q9Y5V3-2|MAGED1;nc|ENSG00000187243|Q96JG8-2|MAGED4;nc|ENSG00000187243|Q96JG8-4|MAGED4	190.62248201133156	0.00022967542297918066	4				NaN	NaN	0	NaN	3297	2585	5879
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5885	18.904	NaN	22074	30	0	2900.1	0.034	+			37687	SLSESSPPK	9	80	466.2396501597432	930.4647473862864	2	466.2403259277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLSESSPPK_	ENSG00000050405|ENST00000341247|LIMA1;LIMA1|p.T536Lfs*38|2|0.4|ENSG00000050405|chr12:50177739-50177739|G/-|frameshift_variant;nc|ENSG00000050405|Q9UHB6-2|LIMA1;nc|ENSG00000050405|Q9UHB6-3|LIMA1;nc|ENSG00000050405|Q9UHB6-4|LIMA1;nc|ENSG00000050405|Q9UHB6-5|LIMA1	67.49366992349736	0.1516260258713357	4				NaN	NaN	0	NaN	3298	2585	5879
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5886	18.905	NaN	11907	30	0	5005.7	0.143			+	8925	EEVPHEPPFM	10	72	606.272993725959	1210.531434518718	2	606.2741088867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EEVPHEPPFM_	REV__ENSG00000128731|ENST00000261609|HERC2;REV__ENST00000428453.5_1_15:20588586-20667676:-|nuORF;REV__ENST00000430598.5_1_15:20613931-20667676:-|nuORF;REV__ENST00000524476.5_1_15:28882105-28886289:+|nuORF;REV__ENST00000529353.1_1_15:28878360-28886587:+|nuORF;REV__ENST00000529624.5_3_15:28877823-28916776:+|nuORF;REV__ENST00000562687.6_3_16:32769598-32772029:+|nuORF;REV__HERC2|p.G2202Afs*8|1|0.2|ENSG00000128731|chr15:28213923-28213923|C/-|frameshift_variant;REV__nc|ENSG00000290376|Q9BVR0|HERC2P3	63.53385203322761	0.33370026130094593	4				NaN	NaN	0	NaN	3299	2585	5879
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5904	18.944	NaN	25366	30	0	8934.8	0.214			+	5354	ATVTTTVIATA	11	68	350.2008952782351	1047.5808564349054	3	350.2013854980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATVTTTVIATA_	REV__AFF2|p.Q1237Pfs*15|1|0.14|ENSG00000155966|chrX:148987448-148987449|-/C|frameshift_variant;REV__ENSG00000155966|ENST00000370460|AFF2;REV__nc|ENSG00000155966|P51816-2|AFF2;REV__nc|ENSG00000155966|P51816-3|AFF2;REV__nc|ENSG00000155966|P51816-5|AFF2;REV__nc|ENSG00000155966|P51816-6|AFF2;REV__nc|ENSG00000155966|P51816-7|AFF2	29.550750289552195	0.6798279264880025	4				NaN	NaN	0	NaN	3314	2588	5903
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5905	18.948	NaN	48843	30	0	6753.6	0.106				-1	 	0	92	451.73195293815877	901.4493529431176	2	451.7322692871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3315	2588	5903
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5906	18.95	NaN	5405.5	30	0	601.35	0.106			+	37335	SLELDQRKA	9	63	530.2926487853205	1058.5707446374408	2	530.2935791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLELDQRKA_	REV__RAD52|p.P198L|1|0.15|ENSG00000002016|chr12:916771-916771|G/A|missense_variant	69.6276240434122	0.14239879520340665	4				NaN	NaN	0	NaN	3316	2588	5903
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5907	18.952	NaN	17856	30	0	1476	0.106	+			33045	REKEIKSEL	9	84	566.3217542405289	1130.6289555478577	2	566.3225708007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_REKEIKSEL_	ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC;PRKDC|p.K3681Nfs*6|1|0.32|ENSG00000253729|chr8:47785174-47785177|TTCT/-|frameshift_variant;PRKDC|p.M3670*|1|0.5|ENSG00000253729|chr8:47785212-47785212|T/-|frameshift_variant;PRKDC|p.M3846Cfs*12|1|0.13|ENSG00000253729|chr8:47779047-47779047|T/-|frameshift_variant;PRKDC|p.M4020Cfs*2|1|0.31|ENSG00000253729|chr8:47776968-47776968|T/-|frameshift_variant;PRKDC|p.N3605Kfs*3|1|0.22|ENSG00000253729|chr8:47788993-47788994|-/T|frameshift_variant;PRKDC|p.N4037Ifs*15|1|0.17|ENSG00000253729|chr8:47776916-47776916|T/-|frameshift_variant;PRKDC|p.S3402Ifs*16|1|0.04|ENSG00000253729|chr8:47799302-47799303|-/AAACCGTGAGTTAGAGGAGGTAA|frameshift_variant;PRKDC|p.S4099Qfs*6|1|0.25|ENSG00000253729|chr8:47774265-47774265|A/-|frameshift_variant;PRKDC|p.T3268Pfs*7|1|0.5|ENSG00000253729|chr8:47803426-47803426|T/-|frameshift_variant;PRKDC|p.W3401Cfs*4|1|0.01|ENSG00000253729|chr8:47799304-47799305|-/AATGAATA|frameshift_variant	104.42354056486148	0.0346881550498418	4				NaN	NaN	0	NaN	3317	2588	5903
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5908	18.954	NaN	3001	30	0	529.6	0.106				-1	AEMLPIIEK	9	48	353.8645324707031	NaN	0	353.8645324707031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_AEM(Oxidation (M))LPIIEK_	tr|U7SKY3|U7SKY3_FUSNUOxaloacetatedecarboxylase,alphasubunitOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01990PE=4SV=1	18.262085536374414	0.37517301184500873	4				NaN	NaN	0	NaN	3318	2588	5903
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5909	18.955	NaN	13487	30	0	1451.1	0.033			+	2671	AQNDLSVK	8	78	437.73445832751486	873.4543637218297	2	437.73480224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AQNDLSVK_	REV__CLEC16A|p.L611Wfs*11|4|0.33|ENSG00000038532|chr16:11047302-11047302|T/-|frameshift_variant;REV__CLEC16A|p.Y604Ifs*18|1|0.23|ENSG00000038532|chr16:11044063-11044063|T/-|frameshift_variant;REV__ENSG00000038532|ENST00000409790|CLEC16A	65.46538089061403	0.44767499471257033	4				NaN	NaN	0	NaN	3319	2588	5903
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5910	18.956	NaN	9845.2	30	0	1029.6	0.139	+			7139	DAAYSHHY	8	80	482.2007468227101	962.3869407122202	2	482.20111083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DAAYSHHY_	ENSG00000059378|ENST00000263549|PARP12	92.19062340807069	0.27083854825242376	4				NaN	NaN	0	NaN	3320	2588	5903
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5928	18.995	NaN	88529	30	0	11255	0.186				-1	 	0	94	434.1951092552845	866.375665577369	2	434.1954650878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3335	2591	5927
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5929	18.998	NaN	42217	30	0	7563.4	0.106				-1	 	0	96	472.26892387524646	942.5232948172929	2	472.2692565917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3336	2591	5927
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5930	19	NaN	23672	30	0	3091.9	0.106	+			20140	KEKPEEESL	9	82	544.7762608236895	1087.537968714179	2	544.7774047851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEKPEEESL_	ENSG00000148396|ENST00000684901|SEC16A;nc|ENSG00000148396|O15027-2|SEC16A;nc|ENSG00000148396|O15027-3|SEC16A;nc|ENSG00000148396|O15027-4|SEC16A;nc|ENSG00000148396|O15027-5|SEC16A;SEC16A|p.P2155Hfs*25|1|0.25|ENSG00000148396|chr9:136447664-136447664|G/-|frameshift_variant	104.0567914643314	0.03506238181059741	4				NaN	NaN	0	NaN	3337	2591	5927
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5931	19.001	NaN	9909.8	30	0	2363.3	0.106	+			9263	EGYQNQGQG	9	73	490.70635234504937	979.3981517568988	2	490.7068176269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EGYQNQGQG_	ENSG00000215853|ENST00000316073|RPTN	38.80614096846853	0.43426287593479557	4				NaN	NaN	0	NaN	3338	2591	5927
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5932	19.003	NaN	42466	30	0	5973.5	0.106				-1	 	0	107	362.23217914018176	1083.6747080207454	3	362.2326354980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3339	2591	5927
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5933	19.005	NaN	17709	30	0	2266	0.106	+			39999	STMSACASTAR	11	76	571.7486765876979	1141.4828002421957	2	571.750244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_STMSAC(Carbamidomethyl (C))ASTAR_	ENST00000566749.5_1_16:30094754-30094823:+|nuORF	180.09051358498644	8.12049839671008E-06	4				NaN	NaN	0	NaN	3340	2591	5927
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5934	19.007	NaN	22992	30	0	14509	0.038	+			19866	KEELMERLK	9	68	392.5536147870836	1174.6390149614508	3	392.5534362792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KEELMERLK_	ENSG00000137710|ENST00000645495|RDX;ENSG00000147065|ENST00000360270|MSN;nc|ENSG00000137710|P35241-4|RDX;nc|ENSG00000137710|P35241-5|RDX;RDX|p.R342C|1|0.2|ENSG00000137710|chr11:110247769-110247769|G/A|missense_variant	42.86426827375447	0.38666266728046506	4				NaN	NaN	0	NaN	3341	2591	5927
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5952	19.044	NaN	66398	30	0	8847.1	0.191	+			20174	KEKVSTQNL	9	106	523.7949874465537	1045.5754219599073	2	523.7957763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEKVSTQNL_	ENSG00000100342|ENST00000397278|APOL1;nc|ENSG00000100342|O14791-2|APOL1;nc|ENSG00000100342|O14791-3|APOL1	168.25843898104137	0.0030641937004078144	4				NaN	NaN	0	NaN	3356	2594	5951
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5953	19.048	NaN	12889	30	0	1084	0.106	+			4751	ATMQGDREQLK	11	86	638.8181243559367	1275.6216957786733	2	638.8192138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATMQGDREQLK_	ADNP|p.Y1033Mfs*48|1|0.33|ENSG00000101126|chr20:50891618-50891618|G/-|frameshift_variant;ENSG00000101126|ENST00000621696|ADNP	142.76334254051145	0.00028926960707674297	4				NaN	NaN	0	NaN	3357	2594	5951
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5954	19.05	NaN	38307	30	0	7158.7	0.106	+			39988	STMPHTSGMNR	11	85	609.7705349935361	1217.526517053872	2	609.7713623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STMPHTSGMNR_	ENSG00000150907|ENST00000379561|FOXO1	131.115847015877	0.0012139520786195257	4				NaN	NaN	0	NaN	3358	2594	5951
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5955	19.051	NaN	47055	30	0	25219	0.106			+	22973	KVREVEIEK	9	77	377.2227326361101	NaN	0	377.223876953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KVREVEIEK_	REV__ENSG00000117228|ENST00000370473|GBP1	58.22992032128504	0.15686832049467786	4				NaN	NaN	0	NaN	3359	2594	5951
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5956	19.053	NaN	6730	30	0	1063.6	0.106	+			8807	EEKTQVKTF	9	66	555.2949302735235	1108.575307613847	2	555.2959594726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EEKTQVKTF_	ENSG00000133858|ENST00000378743|ZFC3H1;nc|ENSG00000133858|O60293-2|ZFC3H1;nc|ENSG00000133858|O60293-4|ZFC3H1;ZFC3H1|p.E1034Dfs*26|1|0.04|ENSG00000133858|chr12:71632230-71632231|-/AATAAAAATACTG|frameshift_variant;ZFC3H1|p.E390Nfs*4|1|0.39|ENSG00000133858|chr12:71644989-71644989|T/-|frameshift_variant;ZFC3H1|p.K385Nfs*9|5|0.36|ENSG00000133858|chr12:71645001-71645001|T/-|frameshift_variant;ZFC3H1|p.L1048*|1|0.18|ENSG00000133858|chr12:71632189-71632189|A/-|frameshift_variant;ZFC3H1|p.L1693Ffs*10|1|0.1|ENSG00000133858|chr12:71619380-71619381|-/A|frameshift_variant;ZFC3H1|p.V320Sfs*2|1|0.13|ENSG00000133858|chr12:71656942-71656943|-/T|frameshift_variant;ZFC3H1|p.V423Sfs*2|1|0.32|ENSG00000133858|chr12:71644889-71644890|-/T|frameshift_variant	47.657333605630114	0.33044192980041115	4				NaN	NaN	0	NaN	3360	2594	5951
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5957	19.055	NaN	1921.6	30	0	339.6	0.106	+			37448	SLIGGPGSHIG	11	39	332.1819763183594	NaN	0	332.1819763183594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLIGGPGSHIG_	ENSG00000196876|ENST00000627620|SCN8A;nc|ENSG00000196876|Q9UQD0-3|SCN8A;nc|ENSG00000196876|Q9UQD0-4|SCN8A;nc|ENSG00000196876|Q9UQD0-5|SCN8A;nc|ENSG00000196876|Q9UQD0|SCN8A	27.882242232435846	0.44115667141176046	4				NaN	NaN	0	NaN	3361	2594	5951
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5958	19.057	NaN	6232.8	30	0	840.57	0.035	+			10077	ESILKEAQI	9	72	515.7927632499973	1029.5709735667945	2	515.79296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ESILKEAQI_	ENSG00000114487|ENST00000232603|MORC1;MORC1|p.K745Rfs*6|1|0.31|ENSG00000114487|chr3:108986903-108986903|T/-|frameshift_variant;MORC1|p.N978Kfs*2|2|0.38|ENSG00000114487|chr3:108958986-108958987|-/T|frameshift_variant;nc|ENSG00000114487|Q86VD1-2|MORC1	68.78682469695295	0.14603441672067394	4				NaN	NaN	0	NaN	3362	2594	5951
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5976	19.093	NaN	329300	30	0	134570	0.14	+			3980	ATATVSVGK	9	75	417.23948989360315	832.4644268540063	2	417.2398986816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATATVSVGK_	ENSG00000261150|ENST00000615648|EPPK1;EPPK1|p.G2015Vfs*36|2|0.33|ENSG00000261150|chr8:143867210-143867210|C/-|frameshift_variant;EPPK1|p.Q829Rfs*8|1|0.05|ENSG00000261150|chr8:143870770-143870770|C/-|frameshift_variant;EPPK1|p.Y695Ifs*68|1|0.36|ENSG00000261150|chr8:143871171-143871172|-/T|frameshift_variant	126.24258497203832	0.01742065577488747	4				NaN	NaN	0	NaN	3377	2597	5975
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5977	19.095	NaN	12166	30	0	900.35	0.106			+	-1	MEYQQLQPCMK	11	99	736.3226061848151	1470.63065943643	2	736.3243408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_MEYQQLQPC(Carbamidomethyl (C))M(Oxidation (M))K_	REV__ENSG00000175899|ENST00000318602|A2M	30.317721548370564	0.6717830234747728	4				NaN	NaN	0	NaN	3378	2597	5975
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5978	19.097	NaN	7127.6	30	0	1509.2	0.106				-1	 	0	73	522.2260106406021	1042.4374683480041	2	522.2268676757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3379	2597	5975
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5979	19.099	NaN	18978	30	0	2491.1	0.106	+			38647	SSIEKTISK	9	79	496.7855153478575	991.556477762515	2	496.7846984863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSIEKTISK_	nc|ENSG00000211892|P01861-1|IGHG4;nc|ENSG00000211892|P01861|IGHG4	186.41076107051632	0.0006524797715399015	4				NaN	NaN	0	NaN	3380	2597	5975
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5980	19.101	NaN	7531.7	30	0	890.96	0.106	+			6716	CADNTGAKNL	10	73	532.2450736694963	1062.4755944057924	2	532.2460327148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_C(Carbamidomethyl (C))ADNTGAKNL_	ENSG00000125691|ENST00000479035|RPL23;ENST00000584912.5_1_17:37008851-37009963:-|nuORF	75.04331003522576	0.23611669241777622	4				NaN	NaN	0	NaN	3381	2597	5975
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5981	19.103	NaN	6642.2	30	0	923.75	0.106			+	19656	KDLNETKI	8	69	480.7710428884225	959.5275328436451	2	480.7713928222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KDLNETKI_	REV__ENSG00000196335|ENST00000355870|STK31;REV__nc|ENSG00000196335|Q9BXU1-2|STK31;REV__nc|ENSG00000196335|Q9BXU1-3|STK31	54.776311868738084	0.5534952410049249	4				NaN	NaN	0	NaN	3382	2597	5975
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5982	19.105	NaN	19064	30	0	6461	0.038	+			39680	STIGPEGVHQK	11	70	384.8717417472568	1151.5933958419705	3	384.87176513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STIGPEGVHQK_	nc|ENSG00000157654|Q9Y2D5-8|PALM2AKAP2;nc|ENSG00000157654|Q9Y2D5-9|PALM2AKAP2	63.42647028704847	0.292869158926425	4				NaN	NaN	0	NaN	3383	2597	5975
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6000	19.142	NaN	61775	30	0	23382	0.163	+			49322	VVSEKQFSK	9	83	351.19714617880413	1050.5696091366124	3	351.19757080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVSEKQFSK_	ENSG00000163584|ENST00000295830|RPL22L1	88.17693792209575	0.07000514020414955	4				NaN	NaN	0	NaN	3398	2600	5999
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6001	19.145	NaN	58272	30	0	19978	0.091	+			2990	ASFDKAKLK	9	85	504.2975271769007	1006.5805014206014	2	504.2977294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASFDKAKLK_	ENSG00000034510|ENST00000233143|TMSB10	101.45984612302182	0.0377122763612125	4				NaN	NaN	0	NaN	3399	2600	5999
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6002	19.147	NaN	96091	30	0	30899	0.106	+			3457	ASRPHRKGV	9	87	336.53452294941934	NaN	0	336.53448486328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASRPHRKGV_	ENST00000382038.6_1_5:34914962-34915626:-|nuORF	38.80614096846853	0.28164298475537564	4				NaN	NaN	0	NaN	3400	2600	5999
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6003	19.149	NaN	37634	30	0	3560.4	0.106	+			49323	VVSEKQFSK	9	93	526.2910158090752	1050.5674786849504	2	526.2926635742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVSEKQFSK_	ENSG00000163584|ENST00000295830|RPL22L1	122.93914200107957	0.019420478173996256	4				NaN	NaN	0	NaN	3401	2600	5999
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6004	19.15	NaN	11337	30	0	2188.4	0.106			+	-1	WCESINRRYN	10	77	699.3226027723799	1396.6306526115598	2	699.3242797851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_WC(Carbamidomethyl (C))ESINRRYN_	REV__ENST00000506401.6_1_17:48148218-48152910:+|nuORF	20.94693142431847	0.7087701759873708	4				NaN	NaN	0	NaN	3402	2600	5999
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6005	19.152	NaN	7572.8	30	0	628.22	0.106	+			24104	LEKLEDTVK	9	76	358.8728789239074	1073.5968073719223	3	358.8733825683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LEKLEDTVK_	ENSG00000197879|ENST00000648651|MYO1C;ENST00000573961.1_1_17:1380797-1381223:-|nuORF;nc|ENSG00000197879|O00159-2|MYO1C;nc|ENSG00000197879|O00159-3|MYO1C	31.529811441608018	0.5085848003137583	4				NaN	NaN	0	NaN	3403	2600	5999
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6006	19.154	NaN	14980	30	0	2824.6	0.036	+			36970	SIMELPPQL	9	61	343.18918782493637	NaN	0	343.189208984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SIMELPPQL_	ENST00000238714.7_1_2:60983626-60987372:+|nuORF	37.15910966729921	0.2899585034171616	4				NaN	NaN	0	NaN	3404	2600	5999
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6024	19.191	NaN	59411	30	0	13333	0.214	+			38848	SSNLPVNNK	9	84	486.7587475266387	971.5029421200774	2	486.7589416503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSNLPVNNK_	ENSG00000135974|ENST00000258457|C2orf49	132.757866228626	0.013877640931359021	4				NaN	NaN	0	NaN	3419	2603	6023
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6025	19.194	NaN	20962	30	0	2919.2	0.106				-1	 	0	87	537.2821963120977	536.2749198454976	1	537.2785034179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3420	2603	6023
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6026	19.196	NaN	12530	30	0	1281.6	0.106				-1	 	0	64	422.74758181910994	843.4806107050199	2	422.7479248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3421	2603	6023
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6027	19.198	NaN	15124	30	0	1849.7	0.106			+	11863	FTDENVVGSPC	11	74	612.7650987695735	1223.5156446059468	2	612.7658081054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_FTDENVVGSPC(Carbamidomethyl (C))_	REV__ENSG00000182132|ENST00000328939|KCNIP1;REV__nc|ENSG00000182132|Q9NZI2-3|KCNIP1;REV__nc|ENSG00000182132|Q9NZI2-4|KCNIP1;REV__nc|ENSG00000182132|Q9NZI2-5|KCNIP1;REV__nc|ENSG00000182132|Q9NZI2|KCNIP1	75.04331003522576	0.19369523587789836	4				NaN	NaN	0	NaN	3422	2603	6023
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6028	19.2	NaN	5759.8	30	0	878.31	0.106			+	25879	LSFTEVSRL	9	78	526.2910158090752	1050.5674786849504	2	525.7844848632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSFTEVSRL_	REV__ENST00000540675.5_2_18:61442852-61442879:+|nuORF	49.536043120802724	0.308405419312776	4				NaN	NaN	0	NaN	3423	2603	6023
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6029	19.202	NaN	4939.3	30	0	642.58	0.034	+			12457	GEDGSGKTTL	10	61	482.73133767222873	963.4481224112575	2	482.7324523925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GEDGSGKTTL_	ENSG00000135720|ENST00000258198|DYNC1LI2;nc|ENSG00000135720|O43237-2|DYNC1LI2	89.02883481214508	0.13663399911061233	4				NaN	NaN	0	NaN	3424	2603	6023
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6030	19.202	NaN	3264.9	30	0	674.5	0.139	+			14536	GTDSHLVVK	9	62	478.2635751010865	954.512597268973	2	478.26385498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GTDSHLVVK_	ENSG00000186635|ENST00000393609|ARAP1;ENST00000465814.5_1_11:72396711-72407721:-|nuORF;ENST00000544958.5_1_11:72404190-72406109:-|nuORF;nc|ENSG00000186635|Q96P48-1|ARAP1;nc|ENSG00000186635|Q96P48-2|ARAP1;nc|ENSG00000186635|Q96P48-3|ARAP1;nc|ENSG00000186635|Q96P48-4|ARAP1;nc|ENSG00000186635|Q96P48-5|ARAP1;nc|ENSG00000186635|Q96P48-7|ARAP1	69.6276240434122	0.14239879520340665	4				NaN	NaN	0	NaN	3425	2603	6023
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6048	19.241	NaN	73145	30	0	20781	0.182				-1	 	0	79	438.2504517407071	874.4863505482142	2	438.250732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3440	2606	6047
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6049	19.244	NaN	197440	30	0	64253	0.106	+			19301	KAGEVFIHK	9	138	343.53388422695195	1027.579823281056	3	343.5344543457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KAGEVFIHK_	ENSG00000147140|ENST00000276079|NONO;ENST00000486613.6_1_X:70504267-70513876:+|nuORF;ENST00000566277.2_1_16:69791529-69791679:-|nuORF;nc|ENSG00000147140|Q15233-2|NONO	125.71293069911285	0.017741295328254008	4				NaN	NaN	0	NaN	3441	2606	6047
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6050	19.246	NaN	52547	30	0	14755	0.106			+	18668	ISWVPYHGA	9	93	515.2631613833045	1028.5117698334088	2	515.264404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ISWVPYHGA_	REV__ENSG00000102575|ENST00000648477|ACP5	83.28718786952967	0.08379093283639245	4				NaN	NaN	0	NaN	3442	2606	6047
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6051	19.248	NaN	8057.2	30	0	693.69	0.106			+	33990	RSGLASPL	8	76	400.73459994581646	799.4546469584329	2	400.7348327636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RSGLASPL_	REV__ENSG00000132825|ENST00000370996|PPP1R3D	66.42927471994793	0.4381325844043345	4				NaN	NaN	0	NaN	3443	2606	6047
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6052	19.25	NaN	21639	30	0	2404.1	0.106			+	29947	PMSKLKEKM	9	102	369.8679646512813	1106.5820645540439	3	369.8682861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_PM(Oxidation (M))SKLKEKM_	REV__AK7|p.R462I|1|0.1|ENSG00000140057|chr14:96471505-96471505|G/T|missense_variant;REV__ENSG00000140057|ENST00000267584|AK7	80.45461616416974	0.09558281504443908	4				NaN	NaN	0	NaN	3444	2606	6047
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6053	19.252	NaN	10846	30	0	1173.5	0.106	+			16525	HEVKEAQTL	9	81	527.7794563451164	1053.5443597570327	2	527.7803955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HEVKEAQTL_	ENSG00000127603|ENST00000564288|MACF1;MACF1|p.A5223Lfs*8|1|0.21|ENSG00000127603|chr1:39388486-39388486|G/-|frameshift_variant;MACF1|p.N4824Kfs*19|1|0.33|ENSG00000127603|chr1:39387292-39387293|-/A|frameshift_variant;MACF1|p.T4896Lfs*29|1|0.27|ENSG00000127603|chr1:39387507-39387507|A/-|frameshift_variant;nc|ENSG00000127603|Q9UPN3-2|MACF1;nc|ENSG00000127603|Q9UPN3-3|MACF1;nc|ENSG00000127603|Q9UPN3-4|MACF1;nc|ENSG00000127603|Q9UPN3-5|MACF1;nc|ENSG00000127603|Q9UPN3|MACF1	65.46538089061403	0.16805504838372562	4				NaN	NaN	0	NaN	3445	2606	6047
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6054	19.253	NaN	14467	30	0	2602.6	0.034	+			36345	SESSPPKAM	9	74	467.2201799899879	932.4258070467758	2	467.22088623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SESSPPKAM_	ENSG00000050405|ENST00000341247|LIMA1;LIMA1|p.T536Lfs*38|2|0.4|ENSG00000050405|chr12:50177739-50177739|G/-|frameshift_variant;nc|ENSG00000050405|Q9UHB6-2|LIMA1;nc|ENSG00000050405|Q9UHB6-3|LIMA1;nc|ENSG00000050405|Q9UHB6-4|LIMA1;nc|ENSG00000050405|Q9UHB6-5|LIMA1	60.11826168202944	0.21262886028301267	4				NaN	NaN	0	NaN	3446	2606	6047
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6072	19.291	NaN	492150	30	0	197270	0.1			+	47141	VLQLTAALLAH	11	86	383.90438725092537	1148.6913323529761	3	383.904541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VLQLTAALLAH_	REV__nc|ENSG00000105778|Q8NBF6-2|AVL9	40.77816245573522	0.5472954108598816	4				NaN	NaN	0	NaN	3461	2609	6071
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6073	19.293	NaN	212750	30	0	31977	0.071	+			46929	VIYEKTIRK	9	95	575.3524643092327	1148.6903756852653	2	575.3532104492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VIYEKTIRK_	ENSG00000124429|ENST00000262753|POF1B;nc|ENSG00000124429|Q8WVV4-1|POF1B;nc|ENSG00000124429|Q8WVV4-3|POF1B	146.78539889680295	0.007618400906539062	4				NaN	NaN	0	NaN	3462	2609	6071
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6074	19.294	NaN	39333	30	0	7505	0.106	+			19302	KAGEVFIHK	9	79	514.7972613537421	1027.579969774284	2	514.7979125976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KAGEVFIHK_	ENSG00000147140|ENST00000276079|NONO;ENST00000486613.6_1_X:70504267-70513876:+|nuORF;ENST00000566277.2_1_16:69791529-69791679:-|nuORF;nc|ENSG00000147140|Q15233-2|NONO	136.98908636845044	0.011892605960677736	4				NaN	NaN	0	NaN	3463	2609	6071
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6075	19.296	NaN	18260	30	0	4096.8	0.106			+	21684	KQEIQFRL	8	84	531.3110959590495	1060.6076389848988	2	531.31396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KQEIQFRL_	REV__CSPP1|p.E750Q|1|0.05|ENSG00000104218|chr8:67158468-67158468|G/C|missense_variant	76.7741389293348	0.3504530765139327	4				NaN	NaN	0	NaN	3464	2609	6071
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6076	19.298	NaN	14426	30	0	3386.7	0.106				-1	LQSRMALVK	9	69	354.5440195227028	1060.6102291683085	3	354.5448303222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_LQSRM(Oxidation (M))ALVK_	ENSG00000187535|ENST00000426508|IFT140;ENST00000565298.5_1_16:1560947-1574065:-|nuORF;nc|ENSG00000187535|Q96RY7-2|IFT140	45.97224482568171	0.3502073465782774	4				NaN	NaN	0	NaN	3465	2609	6071
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6077	19.3	NaN	10629	30	0	1940	0.106	+			5178	ATTHEIMGPK	10	79	542.7754710659766	1083.536389198753	2	542.7766723632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATTHEIMGPK_	ENSG00000073921|ENST00000393346|PICALM;ENST00000528411.1_1_11:85734561-85780352:-|nuORF;nc|ENSG00000073921|Q13492-2|PICALM;nc|ENSG00000073921|Q13492-3|PICALM;nc|ENSG00000073921|Q13492-5|PICALM;PICALM|p.L275Gfs*3|1|0.14|ENSG00000073921|chr11:86003436-86003437|-/TTCC|frameshift_variant	70.8162118820467	0.27065172005956	4				NaN	NaN	0	NaN	3466	2609	6071
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6078	19.301	NaN	13226	30	0	2573.1	0.106				-1	 	0	77	475.73196686350786	949.4493807938157	2	475.73223876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3467	2609	6071
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6079	19.303	NaN	30844	30	0	10212	0.035	+			40449	STVPPSLRK	9	83	492.79483043636276	983.5751079395255	2	492.79510498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_STVPPSLRK_	ENSG00000213676|ENST00000375203|ATF6B;nc|ENSG00000213676|Q99941-2|ATF6B	148.98678547993487	0.0071052929883181565	4				NaN	NaN	0	NaN	3468	2609	6071
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6097	19.341	NaN	78742	30	0	10162	0.199			+	-1	ACSFCYKAMK	10	89	641.2751522904317	1280.5357516476633	2	641.2763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C),Oxidation (M)	_AC(Carbamidomethyl (C))SFC(Carbamidomethyl (C))YKAM(Oxidation (M))K_	REV__ENST00000251507.8_1_1:174927133-174927199:+|nuORF	56.72105179125745	0.3956618550748046	4				NaN	NaN	0	NaN	3483	2612	6096
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6098	19.344	NaN	18047	30	0	7210.8	0.106				-1	 	0	67	328.86557001506554	983.5748806453967	3	328.8660888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3484	2612	6096
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6099	19.346	NaN	14723	30	0	2108.5	0.106	+			38286	SQQNATVLK	9	86	494.77417528736044	987.5337976415209	2	494.7745361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SQQNATVLK_	ENST00000427574.6_1_11:76156149-76164398:+|nuORF	152.06079943815163	0.00638878961959199	4				NaN	NaN	0	NaN	3485	2612	6096
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6100	19.348	NaN	10048	30	0	1238.6	0.106	+			39372	STDGAKVFSK	10	80	520.2748597655894	1038.5351665979788	2	520.2747192382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STDGAKVFSK_	ENSG00000100883|ENST00000216774|SRP54;nc|ENSG00000100883|P61011-2|SRP54	136.5150327860613	0.011683253857074924	4				NaN	NaN	0	NaN	3486	2612	6096
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6101	19.35	NaN	11060	30	0	2394.9	0.106	+			13696	GPQGRAFVH	9	68	484.7561068527358	967.4976607722716	2	484.7566223144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GPQGRAFVH_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	68.484700416344	0.1473408039581241	4				NaN	NaN	0	NaN	3487	2612	6096
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6102	19.351	NaN	14424	30	0	2646.8	0.106			+	10895	FCTCLVKGPL	10	74	540.7848977986512	1079.5552426641023	2	541.2901611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FCTCLVKGPL_	REV__ENST00000438023.5_2_9:6757647-6757842:+|nuORF	47.657333605630114	0.47858658696240314	4				NaN	NaN	0	NaN	3488	2612	6096
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6103	19.353	NaN	11959	30	0	2323	0.037	+			7600	DIVVHRLLM	9	63	365.88213903823254	1094.6245877148976	3	365.882080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DIVVHRLLM_	ENSG00000166938|ENST00000319212|DIS3L;ENST00000564945.1_1_15:66621377-66621779:+|nuORF;nc|ENSG00000166938|Q8TF46-2|DIS3L;nc|ENSG00000166938|Q8TF46-4|DIS3L	25.450171626174864	0.5654022654467333	4				NaN	NaN	0	NaN	3489	2612	6096
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6121	19.391	NaN	473120	30	0	205010	0.126			+	10879	FCAGLYKQ	8	88	465.23234317220056	928.4501334112011	2	465.2328796386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FCAGLYKQ_	REV__ENST00000539664.2_1_7:28994760-28994901:-|nuORF	52.29916861842294	0.578018602984656	4				NaN	NaN	0	NaN	3504	2615	6120
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6122	19.393	NaN	10543	30	0	3085.1	0.106	+			28909	NQQQFIKAV	9	48	359.20130173449905	NaN	0	359.2012939453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NQQQFIKAV_	tr|U7SSD2|U7SSD2_FUSNUPyruvate:ferredoxin(Flavodoxin)oxidoreductaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01591PE=3SV=1	32.81241826257853	0.3119040447479903	4				NaN	NaN	0	NaN	3505	2615	6120
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6123	19.395	NaN	18911	30	0	6917.9	0.106	+			10677	EYSKQMQRF	9	80	616.7893593066957	1231.5641656801913	2	616.7901000976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_EYSKQM(Oxidation (M))QRF_	ENSG00000116478|ENST00000373548|HDAC1;ENSG00000196591|ENST00000519065|HDAC2;ENST00000463172.5_1_1:32757770-32792715:+|nuORF;ENST00000481281.5_1_1:32757770-32793222:+|nuORF;nc|ENSG00000196591|Q92769-3|HDAC2	120.62098272573253	0.020823834273767324	4				NaN	NaN	0	NaN	3506	2615	6120
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6124	19.397	NaN	11455	30	0	1656.8	0.106	+			27841	MTADMAVSVN	10	74	556.7333081661922	1111.4520633991842	2	556.7341918945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term),2 Oxidation (M)	_(Acetyl (Protein N-term))M(Oxidation (M))TADM(Oxidation (M))AVSVN_	ENST00000396941.8_1_14:24587614-24587671:+|nuORF	79.71258880314673	0.19796908725841375	4				NaN	NaN	0	NaN	3507	2615	6120
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6125	19.399	NaN	8023.5	30	0	701.99	0.106			+	20303	KEPVSGPNNR	10	75	549.2878412996723	1096.5611296661446	2	549.2887573242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEPVSGPNNR_	REV__ENSG00000158286|ENST00000377939|RNF207	44.377184641726394	0.5088115166961078	4				NaN	NaN	0	NaN	3508	2615	6120
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6126	19.4	NaN	13640	30	0	3415.4	0.106	+			26108	LSNSHSQL	8	66	443.2243582015037	884.4341634698075	2	443.2247009277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSNSHSQL_	ENSG00000182521|ENST00000247219|TBPL2;TBPL2|p.K373*|1|0.38|ENSG00000182521|chr14:55414390-55414391|-/A|frameshift_variant	71.29570347882199	0.39610197767395533	4				NaN	NaN	0	NaN	3509	2615	6120
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6127	19.402	NaN	21562	30	0	4430.8	0.037			+	20759	KHECFRIEA	9	76	566.7824697700063	1131.5503866068125	2	566.7835083007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KHECFRIEA_	REV__DHX9|p.L1065Cfs*20|1|0.41|ENSG00000135829|chr1:182883563-182883563|C/-|frameshift_variant;REV__ENSG00000135829|ENST00000367549|DHX9;REV__ENST00000473076.1_1_1:182850471-182852465:+|nuORF;REV__ENST00000485081.5_1_1:182847108-182856566:+|nuORF	66.96192283764107	0.15557981141143568	4				NaN	NaN	0	NaN	3510	2615	6120
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6145	19.44	NaN	10080	30	0	5707.1	0.214			+	24288	LEYLLDIPA	9	55	349.53002474341827	1045.568244830455	3	349.5306701660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LEYLLDIPA_	REV__ENSG00000011451|ENST00000673675|WIZ;REV__nc|ENSG00000011451|O95785-3|WIZ;REV__nc|ENSG00000011451|O95785-4|WIZ;REV__nc|ENSG00000011451|O95785|WIZ	34.172542307311794	0.4838870758800184	4				NaN	NaN	0	NaN	3525	2618	6144
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6146	19.444	NaN	16201	30	0	4972.7	0.106				-1	 	0	67	479.2440901100188	956.4736272868377	2	479.24444580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3526	2618	6144
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6147	19.446	NaN	9376.7	30	0	3276.6	0.106	+			22913	KVNSGNKYN	9	78	512.2640266080538	1022.5135002829076	2	512.2648315429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KVNSGNKYN_	ENSG00000012963|ENST00000013070|UBR7	42.86426827375447	0.38666266728046506	4				NaN	NaN	0	NaN	3527	2618	6144
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6148	19.447	NaN	15392	30	0	3206.4	0.106	+			4472	ATIQNETPK	9	79	501.2663178167444	1000.5180827002888	2	501.26666259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATIQNETPK_	ENSG00000077458|ENST00000358780|FAM76B;ENST00000535919.1_1_11:95512769-95516347:-|nuORF;nc|ENSG00000077458|Q5HYJ3-2|FAM76B;nc|ENSG00000077458|Q5HYJ3-3|FAM76B	148.6902309647307	0.00717441509122429	4				NaN	NaN	0	NaN	3528	2618	6144
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6149	19.449	NaN	14006	30	0	1833.4	0.106	+			35810	SEAPPTNQA	9	77	457.7140073835549	913.4134618339098	2	457.7141418457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SEAPPTNQA_	ENSG00000179222|ENST00000326587|MAGED1;ENST00000485420.5_1_X:51636757-51640983:+|nuORF;ENST00000494718.5_1_X:51637400-51640272:+|nuORF;MAGED1|p.P628Rfs*18|1|0.09|ENSG00000179222|chrX:51900215-51900215|C/-|frameshift_variant;nc|ENSG00000179222|Q9Y5V3-2|MAGED1	117.81106730687013	0.02252488733980868	4				NaN	NaN	0	NaN	3529	2618	6144
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6150	19.451	NaN	7249.7	30	0	2329.3	0.033	+			37340	SLELSQAL	8	65	430.7413226626107	859.4680923920214	2	430.7419738769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLELSQAL_	ENSG00000121446|ENST00000294854|RGSL1;nc|ENSG00000121446|A5PLK6-2|RGSL1;nc|ENSG00000121446|A5PLK6-5|RGSL1	66.42927471994793	0.4381325844043345	4				NaN	NaN	0	NaN	3530	2618	6144
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6151	19.452	NaN	5643.5	30	0	1532	0.142			+	9867	EQETEQRLQ	9	68	580.7800767552524	1159.5456005773046	2	580.7809448242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EQETEQRLQ_	REV__ENSG00000159450|ENST00000614923|TCHH;REV__TCHH|p.E1728K|1|0.1|ENSG00000159450|chr1:152108035-152108035|C/T|missense_variant	45.97224482568171	0.3502073465782774	4				NaN	NaN	0	NaN	3531	2618	6144
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6169	19.489	NaN	102360	30	0	34563	0.156	+			34579	RVMKALVNR	9	102	543.8310835913271	1085.6476142494541	2	543.8318481445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVMKALVNR_	ENSG00000149136|ENST00000278412|SSRP1;ENST00000293880.9_1_11:57098199-57100416:-|nuORF	167.22876102047192	0.0032399547248545047	4				NaN	NaN	0	NaN	3546	2621	6168
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6170	19.492	NaN	109790	30	0	15010	0.106				-1	 	0	110	440.7531349896776	879.4917170461553	2	440.7533874511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3547	2621	6168
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6171	19.494	NaN	25159	30	0	16330	0.106	+			42516	TAPQAEHAM	9	77	478.2180344482014	954.4215159632029	2	478.21844482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TAPQAEHAM_	CLUH|p.D1252Tfs*5|1|0.42|ENSG00000132361|chr17:2690771-2690771|T/-|frameshift_variant;CLUH|p.K974Rfs*21|1|0.3|ENSG00000132361|chr17:2694178-2694178|G/-|frameshift_variant;CLUH|p.P878Rfs*12|1|0.23|ENSG00000132361|chr17:2694959-2694959|G/-|frameshift_variant;ENSG00000132361|ENST00000651024|CLUH;nc|ENSG00000132361|O75153|CLUH	78.26377905018397	0.10505600812668463	4				NaN	NaN	0	NaN	3548	2621	6168
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6172	19.496	NaN	29367	30	0	5840.1	0.106	+			2991	ASFDKAKLK	9	84	504.2975271769007	1006.5805014206014	2	504.2973937988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASFDKAKLK_	ENSG00000034510|ENST00000233143|TMSB10	112.10723106719422	0.02684780151337622	4				NaN	NaN	0	NaN	3549	2621	6168
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6173	19.498	NaN	40616	30	0	9582.4	0.106	+			2994	ASFDKAKLK	9	77	336.53452294941934	NaN	0	336.5343322753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASFDKAKLK_	ENSG00000034510|ENST00000233143|TMSB10	40.77816245573522	0.2702456086868081	4				NaN	NaN	0	NaN	3550	2621	6168
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6174	19.499	NaN	20811	30	0	1765.5	0.106	+			49139	VVMAADRSLKK	11	86	609.3547402881015	1216.694927643003	2	609.3554077148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VVMAADRSLKK_	ENSG00000189241|ENST00000368608|TSPYL1	122.17797606160879	0.015994264420551	4				NaN	NaN	0	NaN	3551	2621	6168
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6175	19.501	NaN	48580	30	0	33448	0.038			+	-1	AGCGARSRRGL	11	62	387.5400386629642	1159.5982865890926	3	387.5400695800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_AGC(Carbamidomethyl (C))GARSRRGL_	REV__ENST00000287652.8_1_3:10290066-10290432:+|nuORF	30.568863376406313	0.6691487505135859	4				NaN	NaN	0	NaN	3552	2621	6168
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6193	19.537	NaN	93979	30	0	21060	0.166				-1	 	0	106	523.812951371643	1045.6113498100858	2	523.8139038085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3567	2624	6192
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6194	19.54	NaN	68053	30	0	14353	0.096				-1	 	0	77	479.76325501234646	957.511957091493	2	479.7635803222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3568	2624	6192
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6195	19.542	NaN	18551	30	0	4524.1	0.106	+			5412	ATYHGSFSTK	10	69	549.7637472012027	1097.5129414692053	2	549.7647094726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATYHGSFSTK_	ENSG00000163359|ENST00000295550|COL6A3;ENST00000491769.1_1_2:238233419-238250825:-|nuORF;ENST00000493608.1_1_2:238242084-238243404:-|nuORF;nc|ENSG00000163359|P12111-2|COL6A3;nc|ENSG00000163359|P12111-4|COL6A3	112.84542089569574	0.03954945403314285	4				NaN	NaN	0	NaN	3569	2624	6192
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6196	19.544	NaN	16779	30	0	3100.5	0.106	+			22331	KTFTVQTTK	9	81	527.300448132841	1052.5863433324819	2	527.301025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTFTVQTTK_	ENST00000395002.6_1_4:89744147-89744438:-|nuORF	79.48907831485694	0.09975780661107167	4				NaN	NaN	0	NaN	3570	2624	6192
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6197	19.546	NaN	134200	30	0	41327	0.106				-1	 	0	103	563.2851899982385	1124.5558270632769	2	563.2862548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3571	2624	6192
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6198	19.547	NaN	86582	30	0	19038	0.106	+			30213	PSRPSEAREP	10	79	375.85940578327137	1124.5563879500141	3	375.8597412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PSRPSEAREP_	NPPC|p.G112Rfs*?|1|0.41|ENSG00000163273|chr2:231925473-231925474|-/A|frameshift_variant	34.172542307311794	0.6007644933930345	4				NaN	NaN	0	NaN	3572	2624	6192
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6199	19.549	NaN	21478	30	0	3098.2	0.035	+			22708	KVAPAPAVVK	10	85	490.3180927109376	978.6216324886752	2	490.31842041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KVAPAPAVVK_	ENSG00000148303|ENST00000323345|RPL7A;ENST00000424041.1_1_20:36073469-36073910:-|nuORF;ENST00000463740.5_1_9:136215098-136217195:+|nuORF	115.49404669440601	0.03369372856552391	4				NaN	NaN	0	NaN	3573	2624	6192
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6217	19.587	NaN	44104	30	0	4689.5	0.162	+			28078	NAESGRGQVM	10	73	524.7448139995277	1047.4750750658552	2	524.745849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAESGRGQVM_	ENSG00000008517|ENST00000525643|IL32;nc|ENSG00000008517|P24001-3|IL32;nc|ENSG00000008517|P24001-4|IL32;nc|ENSG00000008517|P24001|IL32	101.45984612302182	0.07336148045341315	4				NaN	NaN	0	NaN	3588	2627	6216
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6218	19.59	NaN	14013	30	0	4002.8	0.106				-1	 	0	64	447.26331485730236	892.5120767814047	2	447.2635192871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3589	2627	6216
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6219	19.592	NaN	6331.5	30	0	488.39	0.106				-1	 	0	72	508.29203660070095	1014.5695202682019	2	508.29248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3590	2627	6216
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6220	19.593	NaN	10236	30	0	954.89	0.106			+	32438	QVIKEHATF	9	81	536.7936110814869	1071.5726692297737	2	536.7948608398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QVIKEHATF_	REV__ENSG00000083635|ENST00000379161|NUFIP1;REV__NUFIP1|p.D481Rfs*8|1|0.19|ENSG00000083635|chr13:44941253-44941254|-/T|frameshift_variant	68.78682469695295	0.14603441672067394	4				NaN	NaN	0	NaN	3591	2627	6216
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6221	19.595	NaN	6384.8	30	0	916.07	0.106	+			5868	AVIRGVTTK	9	68	472.79736279637007	943.5801726595402	2	472.79754638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVIRGVTTK_	ENSG00000175854|ENST00000418976|SWI5;nc|ENSG00000175854|Q1ZZU3|SWI5	80.45461616416974	0.09558281504443908	4				NaN	NaN	0	NaN	3592	2627	6216
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6222	19.597	NaN	3570	30	0	413.89	0.106			+	45945	VASAASASAAI	11	66	459.7474480641276	917.4803431950552	2	459.74774169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VASAASASAAI_	REV__ENST00000296933.10_1_5:171433486-171433849:-|nuORF	49.44154591367651	0.42875387410569	4				NaN	NaN	0	NaN	3593	2627	6216
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6223	19.599	NaN	4676.5	30	0	572.34	0.034	+			5011	ATSAVTVTR	9	64	453.2556523973535	NaN	0	453.2557678222656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATSAVTVTR_	ENSG00000123444|ENST00000430070|KBTBD4;nc|ENSG00000123444|Q9NVX7-1|KBTBD4;nc|ENSG00000123444|Q9NVX7-3|KBTBD4	65.46538089061403	0.1260090208616529	4				NaN	NaN	0	NaN	3594	2627	6216
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6241	19.636	NaN	36070	30	0	8354	0.197	+			48912	VVDNGSGMCK	10	80	505.2248455003759	1008.4351380675519	2	505.2257995605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVDNGSGMCK_	ACTBL2|p.R29Gfs*7|1|0.37|ENSG00000169067|chr5:57482623-57482623|G/-|frameshift_variant;ENSG00000075624|ENST00000646664|ACTB;ENSG00000169067|ENST00000423391|ACTBL2;ENST00000418351.1_1_15:44282253-44282364:-|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000477812.1_1_7:5569027-5569288:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF	94.4091291819064	0.10583072883246657	4				NaN	NaN	0	NaN	3609	2630	6240
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6242	19.639	NaN	12228	30	0	1465	0.106	+			11452	FNDPNAKEM	9	75	541.2337813376561	1080.453009742112	2	541.2349243164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_FNDPNAKEM(Oxidation (M))_	ENSG00000056097|ENST00000265069|ZFR	199.8913184727681	3.377773596966937E-05	4				NaN	NaN	0	NaN	3610	2630	6240
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6243	19.641	NaN	7924.1	30	0	901.53	0.106				-1	 	0	76	487.2564655748771	486.2491891082771	1	487.256591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3611	2630	6240
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6244	19.643	NaN	20640	30	0	3720.4	0.106				-1	TSEGGKCRR	9	91	525.7584951488626	1049.5024373645251	2	525.759033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_TSEGGKC(Carbamidomethyl (C))RR_	ENST00000220244.7_1_15:81241617-81241845:+|nuORF	51.33545320467046	0.2872990594074956	4				NaN	NaN	0	NaN	3612	2630	6240
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6245	19.645	NaN	10862	30	0	4939.8	0.106	+			18586	ISPSVSRG	8	55	401.72386615252566	801.4331793718513	2	401.72442626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ISPSVSRG_	ENST00000452721.2_1_12:110815522-110815708:-|nuORF	39.252832667884924	0.6609488554722044	4				NaN	NaN	0	NaN	3613	2630	6240
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6246	19.647	NaN	4659.6	30	0	525.58	0.106	+			50588	YDDYMQVYEGL	11	79	698.291044518367	1394.567536103534	2	698.29248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YDDYMQVYEGL_	LRP3|p.V308M|1|0.23|ENSG00000130881|chr19:33205692-33205692|G/A|missense_variant	41.42661286455405	0.5384226294179143	4				NaN	NaN	0	NaN	3614	2630	6240
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6247	19.648	NaN	4899	30	0	1627.7	0.038			+	17055	HQQLLRDKQG	10	60	611.8371277305419	1221.6597025278836	2	611.8394775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HQQLLRDKQG_	REV__ENSG00000150764|ENST00000440460|DIXDC1;REV__ENST00000526500.5_1_11:111859671-111889757:+|nuORF;REV__nc|ENSG00000150764|Q155Q3-2|DIXDC1	35.17822180527639	0.5925517082438457	4				NaN	NaN	0	NaN	3615	2630	6240
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6265	19.686	NaN	14223	30	0	6125.7	0.214				-1	 	0	65	363.1886499878852	1086.5441205638556	3	363.1891174316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3630	2633	6264
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6266	19.69	NaN	26477	30	0	5567.2	0.106	+			14224	GSSPVAMQK	9	83	452.7307264721444	903.4469000110888	2	452.7311706542969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSSPVAMQK_	ENSG00000035403|ENST00000211998|VCL;nc|ENSG00000035403|P18206-2|VCL	60.11826168202944	0.21262886028301267	4				NaN	NaN	0	NaN	3631	2633	6264
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6267	19.692	NaN	9960.8	30	0	1628.3	0.106	+			3359	ASNLHALAH	9	68	467.2474180055964	932.4802830779928	2	467.24822998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASNLHALAH_	ENSG00000152518|ENST00000282388|ZFP36L2;ZFP36L2|p.E103Gfs*23|2|0.66|ENSG00000152518|chr2:43225498-43225499|-/T|frameshift_variant;ZFP36L2|p.F119Ifs*7|1|0.3|ENSG00000152518|chr2:43225449-43225450|-/T|frameshift_variant;ZFP36L2|p.F162Sfs*314|1|0.37|ENSG00000152518|chr2:43225319-43225320|-/AGGGCCG|frameshift_variant;ZFP36L2|p.G144Afs*43|5|0.19|ENSG00000152518|chr2:43225373-43225373|C/-|frameshift_variant;ZFP36L2|p.G145Rfs*329|1|0.41|ENSG00000152518|chr2:43225372-43225373|-/C|frameshift_variant;ZFP36L2|p.H201Pfs*259|1|0.56|ENSG00000152518|chr2:43225199-43225202|GTAT/-|frameshift_variant;ZFP36L2|p.I215Hfs*259|1|0.31|ENSG00000152518|chr2:43225162-43225163|-/A|frameshift_variant;ZFP36L2|p.K173Vfs*300|1|0.38|ENSG00000152518|chr2:43225286-43225287|TT/-|frameshift_variant;ZFP36L2|p.Q138Afs*336|1|0.38|ENSG00000152518|chr2:43225393-43225394|-/A|frameshift_variant;ZFP36L2|p.S151Yfs*323|1|0.23|ENSG00000152518|chr2:43225352-43225353|-/T|frameshift_variant;ZFP36L2|p.S89Gfs*11|1|0.44|ENSG00000152518|chr2:43225532-43225539|GCCGCGCT/-|frameshift_variant;ZFP36L2|p.Y98Lfs*86|1|0.3|ENSG00000152518|chr2:43225502-43225511|AGGGTGCCGT/-|frameshift_variant;ZFP36L2|p.Y98Rfs*4|1|0.14|ENSG00000152518|chr2:43225512-43225513|AG/-|frameshift_variant	93.1432384553994	0.056003526918089595	4				NaN	NaN	0	NaN	3632	2633	6264
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6268	19.693	NaN	25267	30	0	4188.3	0.106	+			29490	PCSRFKRK	8	87	511.28863370902775	1020.5627144848555	2	511.28912353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PCSRFKRK_	ENST00000598285.1_1_19:48259921-48260259:+|nuORF	60.97194046774394	0.49215940876911696	4				NaN	NaN	0	NaN	3633	2633	6264
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6269	19.695	NaN	7026.8	30	0	986.69	0.106				-1	AELEHCLK	8	71	500.2496901315141	NaN	0	500.2497253417969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_AELEHC(Carbamidomethyl (C))LK_	ENSG00000183423|ENST00000594814|LRIT3;LRIT3|p.R245Q|1|0.33|ENSG00000183423|chr4:109867785-109867785|G/A|missense_variant;nc|ENSG00000183423|Q3SXY7-2|LRIT3	38.80614096846853	1.7418937515398478	4				NaN	NaN	0	NaN	3634	2633	6264
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6270	19.697	NaN	19225	30	0	4577.7	0.038	+			33898	RRRLELQLQ	9	79	404.58291416117913	1210.7269130837374	3	404.5832214355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RRRLELQLQ_	ENSG00000105357|ENST00000642316|MYH14;MYH14|p.L1950Sfs*14|1|0.34|ENSG00000105357|chr19:50309646-50309646|C/-|frameshift_variant;nc|ENSG00000105357|Q7Z406-4|MYH14;nc|ENSG00000105357|Q7Z406-5|MYH14;nc|ENSG00000105357|Q7Z406-6|MYH14;nc|ENSG00000105357|Q7Z406|MYH14	61.691277971877994	0.19951612995419254	4				NaN	NaN	0	NaN	3635	2633	6264
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6271	19.698	NaN	5364.8	30	0	1217.1	0.142	+			24034	LEEWAKRAD	9	64	373.192354209417	1116.555233228451	3	373.19268798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LEEWAKRAD_	tr|U7SSJ3|U7SSJ3_FUSNUSignalrecognitionparticlereceptorFtsYOS=FusobacteriumnucleatumCTI-5OX=1316586GN=ftsYPE=3SV=1	41.42661286455405	0.403525789677298	4				NaN	NaN	0	NaN	3636	2633	6264
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6289	19.735	NaN	82994	30	0	10583	0.176	+			8089	DWAFVPAPC	9	84	503.2288736201304	1004.4431943070608	2	503.2295227050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DWAFVPAPC_	ENSG00000162849|ENST00000407071|KIF26B;ENST00000479506.1_1_1:245517197-245533964:+|nuORF;KIF26B|p.A1835Pfs*41|1|0.22|ENSG00000162849|chr1:245688480-245688480|G/-|frameshift_variant;KIF26B|p.G746Efs*98|1|0.05|ENSG00000162849|chr1:245646258-245646259|-/AGAT|frameshift_variant;KIF26B|p.R1067Gfs*65|1|0.27|ENSG00000162849|chr1:245686177-245686177|C/-|frameshift_variant;KIF26B|p.T254I|1|0.25|ENSG00000162849|chr1:245367129-245367129|C/T|missense_variant	44.53106598305862	0.36711179743858174	4				NaN	NaN	0	NaN	3651	2636	6288
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6290	19.738	NaN	90082	30	0	10130	0.106	+			38857	SSNSMQTIQK	10	85	562.2731372822021	1122.5317216312042	2	562.274658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSNSMQTIQK_	ENSG00000111057|ENST00000388835|KRT18;ENST00000446618.1_1_22:19245879-19246326:+|nuORF;ENST00000447938.1_1_21:21797263-21797497:-|nuORF;ENST00000506277.1_1_5:36886275-36886596:+|nuORF	237.5086108886737	2.0746155927826986E-16	4				NaN	NaN	0	NaN	3652	2636	6288
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6291	19.74	NaN	53248	30	0	12857	0.106			+	9056	EGGGDDRQGW	10	81	538.7225079006638	1075.4304628681275	2	538.7237548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EGGGDDRQGW_	REV__CON__ENSEMBL:ENSBTAP00000018574	64.20726635412375	0.3275756395432415	4				NaN	NaN	0	NaN	3653	2636	6288
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6292	19.742	NaN	20984	30	0	5811.4	0.106	+			40416	STVGTSNLK	9	85	453.7477823503515	905.481011767503	2	453.74810791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STVGTSNLK_	ENSG00000135111|ENST00000349155|TBX3;nc|ENSG00000135111|O15119-3|TBX3;nc|ENSG00000135111|O15119|TBX3;TBX3|p.K714Rfs*15|1|0.12|ENSG00000135111|chr12:114671931-114671932|TT/-|frameshift_variant;TBX3|p.S443Afs*194|1|1.0|ENSG00000135111|chr12:114674609-114674610|-/ATGGTGGCGGGGCT|frameshift_variant	104.01359247289065	0.03510646158778409	4				NaN	NaN	0	NaN	3654	2636	6288
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6293	19.744	NaN	82213	30	0	11931	0.106	+			5767	AVGNIKVTK	9	111	465.29193573751513	928.5693185418303	2	465.29248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVGNIKVTK_	DDX18|p.K110Efs*11|1|0.42|ENSG00000088205|chr2:117817678-117817679|-/A|frameshift_variant;ENSG00000088205|ENST00000263239|DDX18	134.7655990226056	0.012935733000282069	4				NaN	NaN	0	NaN	3655	2636	6288
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6294	19.746	NaN	21129	30	0	3627.7	0.106	+			3450	ASQQNATVLK	10	74	530.2938384232108	NaN	0	530.2938842773438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASQQNATVLK_	ENST00000427574.6_1_11:76156149-76164398:+|nuORF	200.56263349563793	8.462817923481957E-10	4				NaN	NaN	0	NaN	3656	2636	6288
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6295	19.747	NaN	6216	30	0	654.93	0.036	+			36792	SICGKTFNK	9	73	527.771603644491	1053.528654355782	2	527.7718505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_SIC(Carbamidomethyl (C))GKTFNK_	ENSG00000185219|ENST00000396077|ZNF445	67.49366992349736	0.1516260258713357	4				NaN	NaN	0	NaN	3657	2636	6288
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6313	19.785	NaN	20818	30	0	3515.1	0.214	+			27872	MTKCDVTGGK	10	83	520.2480235763994	1038.4814942195987	2	520.2491455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MTKCDVTGGK_	ITGB8|p.K437T|1|0.33|ENSG00000105855|chr7:20401749-20401749|A/C|missense_variant	110.11987700582712	0.04764356995208832	4				NaN	NaN	0	NaN	3672	2639	6312
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6314	19.789	NaN	29212	30	0	13002	0.106			+	2538	AQAGARHAQR	10	67	355.8604856266394	1064.5596274801183	3	355.86102294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AQAGARHAQR_	REV__CNNM2|p.W228Vfs*183|1|0.44|ENSG00000148842|chr10:102919155-102919156|-/C|frameshift_variant	56.43379154798735	0.3982744522255666	4				NaN	NaN	0	NaN	3673	2639	6312
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6315	19.791	NaN	64329	30	0	16726	0.106				-1	 	0	89	478.2725409965552	954.5305290599105	2	478.27301025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3674	2639	6312
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6316	19.793	NaN	10549	30	0	880.74	0.106				-1	SLMVLVAIG	9	82	459.7713309328814	NaN	0	459.77099609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_SLM(Oxidation (M))VLVAIG_	ENSG00000101425|ENST00000642449|BPI;nc|ENSG00000101425|P17213|BPI	50.0245360154114	0.20652386741182333	4				NaN	NaN	0	NaN	3675	2639	6312
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6317	19.794	NaN	47029	30	0	14289	0.106	+			16809	HPDKKIVAY	9	87	535.8024402205765	1069.590327507953	2	535.8035278320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HPDKKIVAY_	ATXN10|p.F455Lfs*10|1|0.3|ENSG00000130638|chr22:45843115-45843115|T/-|frameshift_variant;ENSG00000130638|ENST00000252934|ATXN10;nc|ENSG00000130638|Q9UBB4-2|ATXN10	129.42129120953632	0.01549634589885217	4				NaN	NaN	0	NaN	3676	2639	6312
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6318	19.796	NaN	17556	30	0	1812.1	0.035			+	20707	KGRKSKRR	8	90	508.33401080394026	1014.6534686746805	2	508.33453369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KGRKSKRR_	REV__ENSG00000196365|ENST00000360614|LONP1;REV__ENST00000590558.5_1_19:5692045-5712033:-|nuORF;REV__nc|ENSG00000196365|P36776-2|LONP1;REV__nc|ENSG00000196365|P36776-3|LONP1	71.87747018426188	0.391254423828572	4				NaN	NaN	0	NaN	3677	2639	6312
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6319	19.797	NaN	16248	30	0	3097.3	0.14			+	-1	LCDNMIQQ	8	80	511.2268644865002	NaN	0	511.2266845703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_LC(Carbamidomethyl (C))DNMIQQ_	REV__ENSG00000163867|ENST00000357182|ZMYM6;REV__ENST00000493328.5_1_1:35455862-35480681:-|nuORF;REV__nc|ENSG00000163867|O95789-1|ZMYM6;REV__ZMYM6|p.F804Lfs*6|1|0.38|ENSG00000163867|chr1:34988670-34988670|A/-|frameshift_variant;REV__ZMYM6|p.I637Yfs*14|1|0.36|ENSG00000163867|chr1:35005177-35005177|T/-|frameshift_variant;REV__ZMYM6|p.L686Ifs*41|1|0.03|ENSG00000163867|chr1:34992324-34992325|-/GAAAGGAAAAGAAAAT|frameshift_variant;REV__ZMYM6|p.N1298Ifs*9|1|0.15|ENSG00000163867|chr1:34987189-34987189|T/-|frameshift_variant;REV__ZMYM6|p.N724Mfs*15|1|0.42|ENSG00000163867|chr1:34988911-34988911|T/-|frameshift_variant	64.20726635412375	1.7418937515398478	4				NaN	NaN	0	NaN	3678	2639	6312
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6337	19.836	NaN	29892	30	0	14146	0.214				-1	 	0	76	451.72866944364597	901.442785954092	2	451.72900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3693	2642	6336
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6338	19.84	NaN	39542	30	0	8712.7	0.106	+			40358	STTRLYLRK	9	86	379.8958726454153	1136.665788536446	3	379.89605712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STTRLYLRK_	ENSG00000051180|ENST00000267868|RAD51;nc|ENSG00000051180|Q06609-2|RAD51;nc|ENSG00000051180|Q06609-4|RAD51	78.26377905018397	0.10505600812668463	4				NaN	NaN	0	NaN	3694	2642	6336
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6339	19.842	NaN	19749	30	0	4343.1	0.106	+			14668	GTIEKSKLITK	11	90	609.3762189469481	1216.7378849606962	2	609.3767700195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTIEKSKLITK_	ENSG00000144426|ENST00000683969|NBEAL1;NBEAL1|p.A1274Qfs*17|1|0.1|ENSG00000144426|chr2:203135766-203135766|A/-|frameshift_variant;NBEAL1|p.F1670Lfs*25|1|0.21|ENSG00000144426|chr2:203144843-203144843|T/-|frameshift_variant;NBEAL1|p.F2315Lfs*2|1|0.17|ENSG00000144426|chr2:203193900-203193900|T/-|frameshift_variant;NBEAL1|p.K2562Rfs*15|1|0.41|ENSG00000144426|chr2:203209306-203209306|A/-|frameshift_variant;NBEAL1|p.N2072Kfs*10|1|0.35|ENSG00000144426|chr2:203172825-203172826|-/A|frameshift_variant;NBEAL1|p.T1311Nfs*3|1|0.08|ENSG00000144426|chr2:203135875-203135876|-/A|frameshift_variant;nc|ENSG00000144426|Q6ZS30-1|NBEAL1;nc|ENSG00000144426|Q6ZS30|NBEAL1	203.02985463924185	1.5177725950747195E-08	4				NaN	NaN	0	NaN	3695	2642	6336
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6340	19.843	NaN	4961.7	30	0	1269.6	0.106			+	24522	LGKWKNRRRE	10	61	448.26456318412636	1341.7718601525792	3	448.2646179199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LGKWKNRRRE_	REV__ENSG00000104218|ENST00000678616|CSPP1;REV__ENST00000521168.5_1_8:68070723-68107652:+|nuORF;REV__nc|ENSG00000104218|Q1MSJ5-1|CSPP1;REV__nc|ENSG00000104218|Q1MSJ5-2|CSPP1;REV__nc|ENSG00000104218|Q1MSJ5|CSPP1	18.262085536374414	0.7236521404371882	4				NaN	NaN	0	NaN	3696	2642	6336
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6341	19.845	NaN	40587	30	0	5477.8	0.106	+			42919	TEIEKARAV	9	91	508.78980958496425	1015.5650662367285	2	508.7901916503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TEIEKARAV_	ENSG00000148843|ENST00000369797|PDCD11	148.6902309647307	0.00717441509122429	4				NaN	NaN	0	NaN	3697	2642	6336
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6342	19.847	NaN	8326.9	30	0	752.21	0.034	+			41183	SVLAQQAAK	9	74	458.26618917343734	NaN	0	458.2662048339844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVLAQQAAK_	ENSG00000134248|ENST00000602318|LAMTOR5;ENST00000531779.1_1_1:110946539-110950281:-|nuORF	62.107414245175825	0.1403307765918332	4				NaN	NaN	0	NaN	3698	2642	6336
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6343	19.848	NaN	7188.9	30	0	1366.5	0.139	+			33627	RLTLKEQP	8	77	492.79483043636276	983.5751079395255	2	492.7951965332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RLTLKEQP_	ENSG00000096996|ENST00000593993|IL12RB1;ENSG00000204613|ENST00000449742|TRIM10;IL12RB1|p.Y481Lfs*8|1|0.07|ENSG00000096996|chr19:18066583-18066584|-/A|frameshift_variant;nc|ENSG00000096996|P42701-2|IL12RB1;nc|ENSG00000096996|P42701-3|IL12RB1	44.377184641726394	0.6291511924298419	4				NaN	NaN	0	NaN	3699	2642	6336
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6361	19.887	NaN	28582	30	0	17871	0.214				-1	 	0	60	446.2421979029494	890.4698428726988	2	446.2424621582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3714	2645	6360
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6362	19.891	NaN	11739	30	0	1468.6	0.106	+			32394	QVDGLNIIR	9	80	514.2974438594161	1026.5803347856322	2	514.2984008789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QVDGLNIIR_	tr|U7SQT4|U7SQT4_FUSNUtypeIsite-specificdeoxyribonucleaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01572PE=3SV=1	90.36981228632155	0.0638227155548745	4				NaN	NaN	0	NaN	3715	2645	6360
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6363	19.893	NaN	12350	30	0	2819	0.106				-1	AKLIYLCK	8	71	336.8676326900219	1007.5810686702657	3	336.5342712402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_AKLIYLC(Carbamidomethyl (C))K_	ENSG00000196187|ENST00000366835|TMEM63A	23.04248740728303	0.7814162927298575	4				NaN	NaN	0	NaN	3716	2645	6360
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6364	19.894	NaN	11801	30	0	1870.5	0.106	+			15913	HAASNPPAQY	10	78	528.2476227650383	1054.4806925968765	2	528.2489013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HAASNPPAQY_	CEACAM6|p.S270T|1|0.25|ENSG00000086548|chr19:41762073-41762073|T/A|missense_variant;ENSG00000086548|ENST00000199764|CEACAM6;ENSG00000105388|ENST00000221992|CEACAM5;ENSG00000105388|ENST00000221992|CEACAM5;nc|ENSG00000105388|P06731-2|CEACAM5;nc|ENSG00000105388|P06731-2|CEACAM5	76.16968421966216	0.22691431239609447	4				NaN	NaN	0	NaN	3717	2645	6360
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6365	19.896	NaN	9096.5	30	0	2342.9	0.106			+	11471	FNQPGGRGP	9	74	465.23234317220056	928.4501334112011	2	465.23272705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FNQPGGRGP_	REV__ENST00000336798.11_2_1:31350222-31350498:-|nuORF	31.954861631926434	0.5046124803899898	4				NaN	NaN	0	NaN	3718	2645	6360
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6366	19.898	NaN	13148	30	0	2501.7	0.033				-1	 	0	67	437.725589686815	873.43662644043	2	437.7259521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3719	2645	6360
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6367	19.899	NaN	8604.5	30	0	3161.1	0.141				-1	 	0	66	543.815759854553	1085.616966775906	2	543.8168334960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3720	2645	6360
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6385	19.938	NaN	85722	30	0	8612.7	0.214				-1	 	0	101	451.7683050204387	901.5220571076774	2	451.7685852050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3735	2648	6384
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6386	19.941	NaN	20644	30	0	2539.2	0.106	+			5368	ATYAGVGANK	10	88	476.24649942473815	950.4784459162763	2	476.2478942871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATYAGVGANK_	ENSG00000178038|ENST00000318962|ALS2CL;ENST00000383742.7_2_3:46712476-46718839:-|nuORF;ENST00000434140.5_2_3:46717393-46723043:-|nuORF;ENST00000486301.5_1_3:46717393-46718248:-|nuORF;nc|ENSG00000178038|Q60I27-2|ALS2CL;nc|ENSG00000178038|Q60I27-3|ALS2CL;nc|ENSG00000178038|Q60I27-6|ALS2CL	141.52041321563706	0.010348713679906373	4				NaN	NaN	0	NaN	3736	2648	6384
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6387	19.943	NaN	55225	30	0	15681	0.106				-1	 	0	100	437.75265476161127	873.4907565900226	2	437.7529602050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3737	2648	6384
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6388	19.945	NaN	19485	30	0	10270	0.106	+			330	AAPTAQKSL	9	67	443.7526508616652	885.4907487901304	2	443.7528991699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AAPTAQKSL_	ENSG00000158615|ENST00000367188|PPP1R15B	59.93077597824379	0.21419174904018318	4				NaN	NaN	0	NaN	3738	2648	6384
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6389	19.947	NaN	26880	30	0	6203.5	0.106				-1	 	0	69	379.21345195428603	756.4123509753721	2	379.2135925292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3739	2648	6384
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6390	19.949	NaN	23015	30	0	3851.6	0.035	+			2992	ASFDKAKLK	9	90	504.2975271769007	1006.5805014206014	2	504.2968444824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASFDKAKLK_	ENSG00000034510|ENST00000233143|TMSB10	88.17693792209575	0.07000514020414955	4				NaN	NaN	0	NaN	3740	2648	6384
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6391	19.949	NaN	6153.3	30	0	648.45	0.139	+			43085	TEMGHGTHL	9	60	491.72344087051493	981.4323288078299	2	491.723876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TEMGHGTHL_	ACOX1|p.N501Tfs*6|1|0.47|ENSG00000161533|chr17:75949577-75949577|T/-|frameshift_variant;ENSG00000161533|ENST00000293217|ACOX1;ENST00000591857.5_1_17:73953534-73975166:-|nuORF;nc|ENSG00000161533|Q15067-3|ACOX1;nc|ENSG00000161533|Q15067|ACOX1	82.30502934623384	0.08758161712619916	4				NaN	NaN	0	NaN	3741	2648	6384
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6409	19.989	NaN	47991	30	0	17786	0.194	+			21339	KLVRQPNIQ	9	78	548.334466725101	1094.654380517002	2	548.3352661132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KLVRQPNIQ_	ENSG00000127124|ENST00000372583|HIVEP3;HIVEP3|p.G2228Vfs*5|1|0.27|ENSG00000127124|chr1:41510989-41510989|C/-|frameshift_variant;nc|ENSG00000127124|Q5T1R4-2|HIVEP3	82.30502934623384	0.08758161712619916	4				NaN	NaN	0	NaN	3756	2651	6408
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6410	19.992	NaN	15269	30	0	7801.1	0.106	+			45682	VAADGRVEPG	10	68	485.7506902098135	969.486827486427	2	485.7509460449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VAADGRVEPG_	DVL2|p.I311V|1|0.16|ENSG00000004975|chr17:7229161-7229161|T/C|missense_variant	47.657333605630114	0.47858658696240314	4				NaN	NaN	0	NaN	3757	2651	6408
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6411	19.994	NaN	57903	30	0	9835	0.106				-1	 	0	106	476.26605281707316	950.5175527009463	2	476.2662353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3758	2651	6408
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6412	19.996	NaN	16216	30	0	2184.7	0.106				-1	 	0	66	332.71016848300883	663.4057840328177	2	332.71051025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3759	2651	6408
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6413	19.997	NaN	19437	30	0	9054	0.106				-1	 	0	60	399.2109209710919	796.4072890089839	2	399.2110595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3760	2651	6408
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6414	19.999	NaN	7997.4	30	0	859.28	0.106	+			9731	EMWNNLNDSEK	11	68	698.2963322646957	1394.5781115961913	2	698.2978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_EM(Oxidation (M))WNNLNDSEK_	ENSG00000029993|ENST00000325307|HMGB3	44.377184641726394	0.49804979881800077	4				NaN	NaN	0	NaN	3761	2651	6408
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6415	20.001	NaN	8969	30	0	2646.7	0.035				-1	 	0	64	326.5180860223306	976.5324286671918	3	326.51849365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3762	2651	6408
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6433	20.039	NaN	26580	30	0	6120.8	0.214	+			41792	SVSQKLMAK	9	82	496.28317349342404	990.5517940536481	2	496.28375244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSQKLMAK_	ENSG00000137200|ENST00000373451|CMTR1	163.1509380574825	0.003936019289634439	4				NaN	NaN	0	NaN	3777	2654	6432
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6434	20.042	NaN	19799	30	0	3645.4	0.106	+			22197	KSTELLIRK	9	83	544.344555537318	1086.674558141436	2	544.345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KSTELLIRK_	ENSG00000132475|ENST00000254810|H3-3B;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000168148|ENST00000366696|H3-4;ENSG00000183598|ENST00000331491|H3C13;ENSG00000188375|ENST00000340398|H3-5;ENSG00000197153|ENST00000359303|H3C12;ENSG00000197409|ENST00000356476|H3C4;ENSG00000203811|ENST00000369158|H3C14;ENSG00000203852|ENST00000403683|H3C15;ENSG00000273983|ENST00000614378|H3C8;ENSG00000274750|ENST00000614911|H3C6;ENSG00000275379|ENST00000616365|H3C11;ENSG00000275714|ENST00000613854|H3C1;ENSG00000277775|ENST00000618052|H3C7;ENSG00000278828|ENST00000685041|H3C10;ENST00000401004.2_1:120904811-120905087:+|nuORF;ENST00000586518.1_1_17:73774674-73775034:-|nuORF;nc|ENSG00000273213|Q5TEC6|H3-7	114.8945686534367	0.024290463251177924	4				NaN	NaN	0	NaN	3778	2654	6432
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6435	20.044	NaN	21613	30	0	7629.9	0.106	+			49011	VVGPVGAGK	9	71	392.2396393981203	782.4647258630406	2	392.2397766113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVGPVGAGK_	ABCC4|p.L883Wfs*7|2|0.22|ENSG00000125257|chr13:95083178-95083178|A/-|frameshift_variant;ABCC4|p.T775Rfs*21|1|0.09|ENSG00000125257|chr13:95161322-95161323|-/AGTATGTCTT|frameshift_variant;ABCC6|p.L780Wfs*31|1|0.44|ENSG00000091262|chr16:16178875-16178875|G/-|frameshift_variant;ENSG00000091262|ENST00000205557|ABCC6;ENSG00000125257|ENST00000645237|ABCC4;nc|ENSG00000091262|O95255-3|ABCC6;nc|ENSG00000125257|O15439-2|ABCC4;nc|ENSG00000125257|O15439-3|ABCC4;nc|ENSG00000125257|O15439-4|ABCC4	47.91560031466742	0.327412564698279	4				NaN	NaN	0	NaN	3779	2654	6432
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6436	20.046	NaN	10606	30	0	1246.6	0.106	+			15424	GTYQDRLTK	9	75	541.2849006284135	1080.555248323627	2	541.2860107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTYQDRLTK_	ENSG00000164758|ENST00000297347|MED30;ENST00000519879.1_1_8:118533115-118541135:+|nuORF;nc|ENSG00000164758|Q96HR3-2|MED30	72.09557110113691	0.13172737702934978	4				NaN	NaN	0	NaN	3780	2654	6432
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6437	20.048	NaN	9348.9	30	0	2198.6	0.106	+			35393	SAQGNVYVK	9	67	483.25536795039153	964.4961829675831	2	483.2559509277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SAQGNVYVK_	ENSG00000131051|ENST00000253363|RBM39;ENST00000397254.2_1_X:43889279-43890164:+|nuORF;ENST00000429968.5_1_20:34292405-34322136:-|nuORF;ENST00000492779.5_1_20:34292405-34320086:-|nuORF;ENST00000496183.5_1_20:34292405-34295154:-|nuORF;nc|ENSG00000131051|Q14498-2|RBM39;nc|ENSG00000131051|Q14498-3|RBM39;NDUFS1-RBM39|1|fusion;NDUFS1-RBM39|2|fusion;NDUFS1-RBM39|3|fusion;NDUFS1-RBM39|4|fusion	106.68306549817024	0.032382560583716295	4				NaN	NaN	0	NaN	3781	2654	6432
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6438	20.05	NaN	38785	30	0	4897	0.035	+			35826	SEDAEKKVL	9	89	509.7742598430237	1017.5339667528474	2	509.7744445800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SEDAEKKVL_	ENSG00000060138|ENST00000228251|YBX3;ENST00000566722.1_1_16:31580383-31580761:-|nuORF;nc|ENSG00000060138|P16989-2|YBX3;nc|ENSG00000060138|P16989-3|YBX3	127.46168284122857	0.016682644177004526	4				NaN	NaN	0	NaN	3782	2654	6432
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6439	20.05	NaN	3379.7	30	0	525.9	0.144			+	-1	CICLPQGTRR	10	73	651.824162769405	1301.63377260561	2	651.8256225585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term),2 Carbamidomethyl (C)	_(Acetyl (Protein N-term))C(Carbamidomethyl (C))IC(Carbamidomethyl (C))LPQGTRR_	REV__ENSG00000170445|ENST00000504156|HARS1;REV__ENST00000509087.1_1_5:140053844-140054778:-|nuORF;REV__nc|ENSG00000170445|P12081-2|HARS1;REV__nc|ENSG00000170445|P12081-3|HARS1;REV__nc|ENSG00000170445|P12081-4|HARS1	34.172542307311794	0.6007644933930345	4				NaN	NaN	0	NaN	3783	2654	6432
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6457	20.09	NaN	125680	30	0	34761	0.18	+			39833	STLKSIMKK	9	93	518.314325746816	1034.614098560432	2	518.315185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STLKSIMKK_	ENSG00000107104|ENST00000382297|KANK1;ENST00000354485.5_1_9:730997-731267:+|nuORF;ENST00000489369.5_1_9:676972-732786:+|nuORF;nc|ENSG00000107104|Q14678-2|KANK1	157.3448221729694	0.005157168637584854	4				NaN	NaN	0	NaN	3798	2657	6456
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6458	20.093	NaN	68898	30	0	13527	0.106	+			39834	STLKSIMKK	9	121	345.87862438803757	1034.6140437643128	3	345.879150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STLKSIMKK_	ENSG00000107104|ENST00000382297|KANK1;ENST00000354485.5_1_9:730997-731267:+|nuORF;ENST00000489369.5_1_9:676972-732786:+|nuORF;nc|ENSG00000107104|Q14678-2|KANK1	104.01359247289065	0.03510646158778409	4				NaN	NaN	0	NaN	3799	2657	6456
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6459	20.095	NaN	84754	30	0	25629	0.106				-1	 	0	87	450.23217874886615	898.4498045645323	2	450.2325744628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3800	2657	6456
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6460	20.097	NaN	42974	30	0	13093	0.106				-1	LPICMLEL	8	117	335.5096952084906	1003.5072562256719	3	335.5101318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_LPIC(Carbamidomethyl (C))M(Oxidation (M))LEL_	ENSG00000224420|ENST00000420022|ADM5	47.91560031466742	0.6071945918984287	4				NaN	NaN	0	NaN	3801	2657	6456
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6461	20.098	NaN	19587	30	0	11602	0.106				-1	ENDEPCKEI	9	72	567.2430955062557	1132.4716380793113	2	567.244384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_ENDEPC(Carbamidomethyl (C))KEI_	C5|p.W1228Gfs*21|1|0.25|ENSG00000106804|chr9:120976882-120976882|A/-|frameshift_variant;CON__Q1A7A4;ENSG00000106804|ENST00000223642|C5	65.46538089061403	0.16805504838372562	4				NaN	NaN	0	NaN	3802	2657	6456
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6462	20.1	NaN	9875	30	0	1188.6	0.106	+			27055	MADENKNEY	9	85	557.228607826593	1112.442662719986	2	557.2296142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MADENKNEY_	ENSG00000137942|ENST00000271234|FNBP1L;FNBP1L|p.T313Pfs*3|1|0.22|ENSG00000137942|chr1:93534852-93534852|A/-|frameshift_variant;nc|ENSG00000137942|Q5T0N5-2|FNBP1L;nc|ENSG00000137942|Q5T0N5-3|FNBP1L;nc|ENSG00000137942|Q5T0N5-4|FNBP1L;nc|ENSG00000137942|Q5T0N5-5|FNBP1L	112.41091882917199	0.026537921851008135	4				NaN	NaN	0	NaN	3803	2657	6456
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6463	20.102	NaN	64767	30	0	7963.4	0.037				-1	 	0	97	579.8086811074069	1157.6028092816136	2	579.8096313476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3804	2657	6456
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6481	20.139	NaN	32236	30	0	5308.7	0.191				-1	 	0	89	489.29209400857644	976.5696350839529	2	489.2923889160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3819	2660	6480
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6482	20.142	NaN	20415	30	0	1920.4	0.106				-1	 	0	95	405.5795908455746	1213.7169431369239	3	405.5799865722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3820	2660	6480
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6483	20.144	NaN	29200	30	0	3893.2	0.106			+	44355	TSIEVELGIN	10	94	537.7872915679609	1073.5600302027217	2	537.7886962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TSIEVELGIN_	REV__CCDC62|p.S16L|1|0.21|ENSG00000130783|chr12:122777501-122777501|C/T|missense_variant	96.19043198914106	0.09563241103653833	4				NaN	NaN	0	NaN	3821	2660	6480
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6484	20.146	NaN	21377	30	0	6003.8	0.106			+	12550	GEGGWRWSC	9	78	547.7277489085831	1093.440944883966	2	547.72900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_GEGGWRWSC(Carbamidomethyl (C))_	REV__ENST00000261778.1_1_16:69117891-69118167:+|nuORF	44.116797842482775	0.37197099687881774	4				NaN	NaN	0	NaN	3822	2660	6480
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6485	20.147	NaN	4340	30	0	753.75	0.106			+	-1	TLRACWLV	8	58	340.1885479074076	1017.5438143224228	3	340.1890563964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_TLRAC(Carbamidomethyl (C))WLV_	REV__ENST00000338700.9_1_4:154125656-154191601:+|nuORF;REV__ENST00000437508.6_2_4:154074414-154191598:+|nuORF;REV__ENST00000441616.5_2_4:154073684-154191601:+|nuORF;REV__ENST00000502281.2_2_4:154178898-154191598:+|nuORF	26.79610172149135	0.7524337208463756	4				NaN	NaN	0	NaN	3823	2660	6480
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6486	20.149	NaN	8736.1	30	0	2239.8	0.106	+			12912	GESGKSTIV	9	61	439.2344547522844	876.4543565713689	2	439.23480224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GESGKSTIV_	ENSG00000065135|ENST00000369851|GNAI3;ENSG00000087258|ENST00000262493|GNAO1;ENSG00000087460|ENST00000371085|GNAS;ENSG00000114349|ENST00000232461|GNAT1;ENSG00000114353|ENST00000313601|GNAI2;ENSG00000127955|ENST00000649796|GNAI1;ENSG00000141404|ENST00000334049|GNAL;ENSG00000214415|ENST00000398291|GNAT3;ENST00000313949.11_1_20:57415898-57485881:+|nuORF;ENST00000371075.7_3_20:57415898-57485881:+|nuORF;ENST00000371098.6_1_20:57415898-57475007:+|nuORF;ENST00000464960.5_1_20:57463863-57475007:+|nuORF;ENST00000477931.5_1_20:57464155-57485881:+|nuORF;ENST00000480975.5_1_20:57464272-57485881:+|nuORF;ENST00000484504.5_1_20:57464299-57475007:+|nuORF;ENST00000491348.5_1_20:57416812-57475007:+|nuORF;ENST00000493744.5_1_20:57416812-57475007:+|nuORF;GNAL|p.L333*|1|0.17|ENSG00000141404|chr18:11876683-11876683|T/-|frameshift_variant;GNAT1|p.Q90Pfs*16|1|0.34|ENSG00000114349|chr3:50193378-50193379|-/CATCC|frameshift_variant;nc|ENSG00000087258|P09471-2|GNAO1;nc|ENSG00000087460|P63092-2|GNAS;nc|ENSG00000087460|P63092-3|GNAS;nc|ENSG00000087460|P63092-4|GNAS;nc|ENSG00000087460|Q5JWF2-2|GNAS;nc|ENSG00000087460|Q5JWF2|GNAS;nc|ENSG00000114353|P04899-2|GNAI2;nc|ENSG00000114353|P04899-3|GNAI2;nc|ENSG00000114353|P04899-4|GNAI2;nc|ENSG00000114353|P04899-5|GNAI2;nc|ENSG00000134183|P19087|GNAT2;nc|ENSG00000141404|P38405|GNAL	62.107414245175825	0.1960472003779324	4				NaN	NaN	0	NaN	3824	2660	6480
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6487	20.151	NaN	18609	30	0	6228	0.036				-1	 	0	69	358.8605917981183	1073.559945994555	3	358.8611755371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3825	2660	6480
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6505	20.189	NaN	72327	30	0	27116	0.215	+			3943	ATATELTTK	9	86	468.25527241243867	934.4959918916774	2	468.2556457519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATATELTTK_	ENSG00000133606|ENST00000255977|MKRN1;ENST00000475010.5_1_7:140155450-140179030:-|nuORF;nc|ENSG00000133606|Q9UHC7-2|MKRN1;nc|ENSG00000133606|Q9UHC7-3|MKRN1;nc|ENSG00000133606|Q9UHC7-4|MKRN1;nc|ENSG00000238222|Q13434|MKRN4P	159.27591364854348	0.004707062175358555	4				NaN	NaN	0	NaN	3840	2663	6504
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6506	20.192	NaN	22455	30	0	3848	0.106	+			27633	MPQGGGQHY	9	77	487.7109809627194	973.4074089922389	2	487.71099853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MPQGGGQHY_	ENSG00000141380|ENST00000415083|SS18;nc|ENSG00000141380|Q15532-2|SS18	106.41520541750704	0.03265588207292361	4				NaN	NaN	0	NaN	3841	2663	6504
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6507	20.194	NaN	10265	30	0	1751.6	0.106	+			5316	ATVLTSVKK	9	79	473.79967494583764	945.5847969584753	2	473.7999267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATVLTSVKK_	ENSG00000092201|ENST00000216297|SUPT16H;ENST00000537175.1_1_12:16553955-16554369:-|nuORF;SUPT16H|p.Y764Cfs*2|1|0.36|ENSG00000092201|chr14:21359493-21359494|AT/-|frameshift_variant	93.1432384553994	0.056003526918089595	4				NaN	NaN	0	NaN	3842	2663	6504
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6508	20.196	NaN	9686.4	30	0	1035.2	0.106	+			40231	STSERTLLK	9	71	517.7950598916022	1033.5755668500044	2	517.7960205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STSERTLLK_	EDC4|p.D801Mfs*15|1|0.26|ENSG00000038358|chr16:67880857-67880857|G/-|frameshift_variant;EDC4|p.Q792Sfs*24|1|0.37|ENSG00000038358|chr16:67880829-67880829|C/-|frameshift_variant;ENSG00000038358|ENST00000358933|EDC4;ENST00000536072.6_1_16:67909906-67914140:+|nuORF;ENST00000572221.5_1_16:67909733-67911757:+|nuORF	74.1650062923329	0.12277912660386392	4				NaN	NaN	0	NaN	3843	2663	6504
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6509	20.198	NaN	15066	30	0	7760.7	0.106			+	2113	ALGRPNTLNK	10	60	361.88123853624325	1082.6218862089297	3	361.8818054199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ALGRPNTLNK_	REV__ENSG00000081479|ENST00000649046|LRP2	35.15202426646627	0.5927656479315102	4				NaN	NaN	0	NaN	3844	2663	6504
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6510	20.2	NaN	23892	30	0	6744.2	0.033				-1	 	0	73	437.23691424028937	872.4592755473788	2	437.23736572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3845	2663	6504
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6511	20.2	NaN	16324	30	0	3822.8	0.142				-1	 	0	77	342.2091548852086	1023.6056352558257	3	342.2096252441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3846	2663	6504
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6529	20.24	NaN	21112	30	0	4314.7	0.214	+			36789	SICGKSFTK	9	81	514.2648451116638	1026.5151372901275	2	514.265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SIC(Carbamidomethyl (C))GKSFTK_	ENSG00000127081|ENST00000375495|ZNF484;nc|ENSG00000127081|Q5JVG2-2|ZNF484;nc|ENSG00000127081|Q5JVG2-3|ZNF484	112.10723106719422	0.02684780151337622	4				NaN	NaN	0	NaN	3861	2666	6528
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6530	20.243	NaN	15348	30	0	1241.8	0.106	+			48786	VTYNGVDNNK	10	75	562.2723134288362	1122.5300739244724	2	562.2730712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTYNGVDNNK_	ENSG00000122545|ENST00000350320|SEPTIN7;ENST00000425198.1_1_7:35872473-35938044:+|nuORF;ENST00000469999.1_1_7:152065296-152065533:+|nuORF;ENST00000492940.1_1_7:35930257-35938044:+|nuORF;nc|ENSG00000122545|Q16181-2|SEPTIN7	142.36107225718385	0.01012457621782354	4				NaN	NaN	0	NaN	3862	2666	6528
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6531	20.245	NaN	26740	30	0	3894.7	0.106	+			42004	SVYKEAIQK	9	89	533.3006903619076	NaN	0	533.3007202148438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVYKEAIQK_	ENSG00000179104|ENST00000321196|TMTC2;ENST00000551915.5_1_12:83081308-83379891:+|nuORF;TMTC2|p.A737Qfs*4|1|0.25|ENSG00000179104|chr12:83050953-83050953|A/-|frameshift_variant	101.45984612302182	0.018494728971010316	4				NaN	NaN	0	NaN	3863	2666	6528
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6532	20.247	NaN	72995	30	0	42022	0.106			+	-1	PTRMAQRFM	9	71	385.19194491602553	1152.5540053482766	3	385.1921691894531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_PTRMAQRFM(Oxidation (M))_	REV__ENSG00000148498|ENST00000374788|PARD3;REV__nc|ENSG00000148498|Q8TEW0-10|PARD3;REV__nc|ENSG00000148498|Q8TEW0-11|PARD3;REV__nc|ENSG00000148498|Q8TEW0-3|PARD3;REV__nc|ENSG00000148498|Q8TEW0-4|PARD3;REV__nc|ENSG00000148498|Q8TEW0-5|PARD3;REV__nc|ENSG00000148498|Q8TEW0-6|PARD3;REV__nc|ENSG00000148498|Q8TEW0-7|PARD3;REV__nc|ENSG00000148498|Q8TEW0-8|PARD3;REV__nc|ENSG00000148498|Q8TEW0-9|PARD3;REV__nc|ENSG00000148498|Q8TEW0|PARD3;REV__PARD3|p.I456*|1|0.04|ENSG00000148498|chr10:34382573-34382573|T/-|frameshift_variant;REV__PARD3|p.S1335Lfs*15|1|0.17|ENSG00000148498|chr10:34111237-34111238|-/G|frameshift_variant	39.252832667884924	0.4290233611298554	4				NaN	NaN	0	NaN	3864	2666	6528
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6533	20.249	NaN	9412.7	30	0	2364.1	0.106	+			40340	STTGCVLNK	9	79	490.24761602675807	978.4806791203162	2	490.2474060058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_STTGC(Carbamidomethyl (C))VLNK_	CEPT1|p.C185Lfs*28|1|0.43|ENSG00000134255|chr1:111161213-111161214|-/T|frameshift_variant;CEPT1|p.C185Vfs*26|1|0.36|ENSG00000134255|chr1:111161214-111161214|T/-|frameshift_variant;ENSG00000134255|ENST00000357172|CEPT1;ENST00000480324.5_1_1:111690336-111702181:+|nuORF	101.60071028292904	0.0375685401170269	4				NaN	NaN	0	NaN	3865	2666	6528
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6534	20.251	NaN	9780.9	30	0	2254.1	0.032				-1	 	0	61	400.23680928839104	798.4590656435821	2	400.2370910644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3866	2666	6528
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6535	20.251	NaN	13602	30	0	2906.3	0.14	+			12095	GAAVLHQRR	9	76	336.5342518593517	NaN	0	336.5343322753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GAAVLHQRR_	ENST00000480991.1_1_1:1597188-1601283:-|nuORF	24.20275056022122	0.35506675290109213	4				NaN	NaN	0	NaN	3867	2666	6528
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6553	20.29	NaN	13397	30	0	2428.9	0.214				-1	 	0	86	521.8030421040804	1041.5915312749607	2	521.803955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3882	2669	6552
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6554	20.294	NaN	12568	30	0	2268.1	0.106			+	1465	AFGTRSTSP	9	64	462.23380571158043	NaN	0	462.2340393066406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AFGTRSTSP_	REV__ENSG00000048342|ENST00000424120|CC2D2A;REV__ENST00000513811.5_1_4:15471657-15545375:+|nuORF;REV__ENST00000514450.2_1_4:15471657-15513157:+|nuORF;REV__nc|ENSG00000048342|Q9P2K1-2|CC2D2A	90.36981228632155	0.04085092656593507	4				NaN	NaN	0	NaN	3883	2669	6552
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6555	20.296	NaN	25163	30	0	4354.8	0.106				-1	 	0	91	530.3107636956388	1058.6069744580775	2	530.3115844726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3884	2669	6552
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6556	20.297	NaN	15791	30	0	1316.5	0.106	+			21497	KNLFSVDMI	9	85	533.7858243525054	NaN	0	533.7857055664062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KNLFSVDMI_	tr|U7STV7|U7STV7_FUSNUGlutamyl-tRNAreductaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=hemAPE=3SV=1	49.44154591367651	0.21054156626303966	4				NaN	NaN	0	NaN	3885	2669	6552
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6557	20.299	NaN	90357	30	0	14553	0.106			+	17916	IGIRLLDEST	10	139	372.8801659758847	1115.6186685278542	3	372.88043212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IGIRLLDEST_	REV__ENSG00000154928|ENST00000398015|EPHB1;REV__nc|ENSG00000154928|P54762-5|EPHB1	34.172542307311794	0.6007644933930345	4				NaN	NaN	0	NaN	3886	2669	6552
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6558	20.301	NaN	12869	30	0	4292	0.036				-1	 	0	55	348.20445576156874	1041.5915378849063	3	348.2049255371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3887	2669	6552
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6559	20.302	NaN	4915.1	30	0	593.49	0.144	+			31317	QIMKSIIPVVM	11	87	637.8649935950183	1273.7154342568365	2	637.8660888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_QIMKSIIPVVM(Oxidation (M))_	ENSG00000185883|ENST00000330398|ATP6V0C	65.46538089061403	0.2746690761028526	4				NaN	NaN	0	NaN	3888	2669	6552
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6577	20.341	NaN	164510	30	0	28287	0.214			+	37808	SMKGSMVM	8	100	451.6926331888532	901.3707134445065	2	451.6929626464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_SM(Oxidation (M))KGSMVM(Oxidation (M))_	REV__nc|ENSG00000178177|Q8N3X6-2|LCORL;REV__nc|ENSG00000178177|Q8N3X6|LCORL	47.91560031466742	0.6071945918984287	4				NaN	NaN	0	NaN	3903	2672	6576
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6578	20.345	NaN	100680	30	0	20797	0.106				-1	 	0	115	346.8606096965036	1037.5599996897108	3	346.86114501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3904	2672	6576
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6579	20.347	NaN	44327	30	0	6817.8	0.106	+			18181	ILYDHAHVK	9	96	548.3002289199238	1094.5859049066476	2	548.3011474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ILYDHAHVK_	ENSG00000115758|ENST00000234111|ODC1	110.11987700582712	0.028875675806141952	4				NaN	NaN	0	NaN	3905	2672	6576
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6580	20.348	NaN	45270	30	0	8446.8	0.106			+	17988	IHRCFIHL	8	89	519.787340769149	1037.5601286050978	2	519.7882080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IHRCFIHL_	REV__ENST00000529652.1_1_17:80551717-80553973:+|nuORF	52.29916861842294	0.578018602984656	4				NaN	NaN	0	NaN	3906	2672	6576
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6581	20.35	NaN	28659	30	0	6427.1	0.106	+			4775	ATNGAKFLK	9	75	475.2765268534138	948.5385007736277	2	475.27667236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATNGAKFLK_	ENSG00000006282|ENST00000006658|SPATA20;ENST00000503063.5_1_17:48628810-48629053:+|nuORF;ENST00000504271.1_1_17:48628191-48629053:+|nuORF;ENST00000504334.5_1_17:48627490-48633020:+|nuORF;ENST00000511937.5_1_17:48628543-48633020:+|nuORF;nc|ENSG00000006282|Q8TB22-3|SPATA20;nc|ENSG00000006282|Q8TB22|SPATA20;SPATA20|p.S677Pfs*29|1|0.12|ENSG00000006282|chr17:50554367-50554367|T/-|frameshift_variant	176.44474024533739	0.0016668318535579616	4				NaN	NaN	0	NaN	3907	2672	6576
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6582	20.352	NaN	11268	30	0	1312.1	0.035				-1	 	0	77	502.27390560710677	1002.5332582810136	2	502.2744445800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3908	2672	6576
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6583	20.353	NaN	13001	30	0	6971.7	0.142	+			30922	QELEKQRQL	9	72	586.324505445639	1170.634457958078	2	586.3253784179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QELEKQRQL_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	109.47833844074708	0.029530294723441826	4				NaN	NaN	0	NaN	3909	2672	6576
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6600	20.391	NaN	129060	30	0	45625	0.156	+			48846	VVAVTLDPDT	10	109	343.8535479549254	1028.5388144649762	3	343.85406494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVAVTLDPDT_	ERMAP|p.F237V|1|0.3|ENSG00000164010|chr1:42840293-42840293|T/G|missense_variant	37.50817390946774	0.5721060100277453	4				NaN	NaN	0	NaN	3923	2675	6599
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6601	20.393	NaN	42185	30	0	22433	0.106			+	-1	LGVMEKRLLA	10	76	382.5615607712501	1144.6628529139502	3	382.5618591308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LGVM(Oxidation (M))EKRLLA_	REV__ENSG00000182118|ENST00000366654|FAM89A	36.446750945000026	0.5818864909973037	4				NaN	NaN	0	NaN	3924	2675	6599
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6602	20.395	NaN	15456	30	0	2773.4	0.106	+			15455	GTYVKPLSNK	10	75	553.8131382637201	1105.6117235942402	2	553.8140869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTYVKPLSNK_	ACOX1|p.N501Tfs*6|1|0.47|ENSG00000161533|chr17:75949577-75949577|T/-|frameshift_variant;ENSG00000161533|ENST00000293217|ACOX1;ENST00000589744.1_1_17:73949530-73951667:-|nuORF;nc|ENSG00000161533|Q15067-3|ACOX1;nc|ENSG00000161533|Q15067|ACOX1	112.10723106719422	0.0417416748461292	4				NaN	NaN	0	NaN	3925	2675	6599
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6603	20.397	NaN	18900	30	0	2734	0.106	+			650	AEAEKKVQL	9	95	508.29254407565736	NaN	0	508.2926330566406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEAEKKVQL_	ENSG00000144747|ENST00000398559|TMF1;nc|ENSG00000144747|P82094-2|TMF1;TMF1|p.R506I|1|0.23|ENSG00000144747|chr3:69043811-69043811|C/A|missense_variant	88.17693792209575	0.04527150213038833	4				NaN	NaN	0	NaN	3926	2675	6599
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6604	20.399	NaN	18236	30	0	5176	0.106	+			49021	VVGPVGCGK	9	71	436.7363186795708	NaN	0	436.7362976074219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_VVGPVGC(Carbamidomethyl (C))GK_	ABCC3|p.A658D|1|0.1|ENSG00000108846|chr17:50669175-50669175|C/A|missense_variant;ABCC3|p.L968Afs*31|1|0.33|ENSG00000108846|chr17:50675920-50675921|-/G|frameshift_variant;ENSG00000108846|ENST00000285238|ABCC3;ENST00000502426.5_1_17:48736553-48755440:+|nuORF;nc|ENSG00000108846|O15438-2|ABCC3;nc|ENSG00000108846|O15438-4|ABCC3	73.97473282117947	0.09202988758641674	4				NaN	NaN	0	NaN	3927	2675	6599
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6605	20.401	NaN	19580	30	0	4832.1	0.106			+	31925	QQLYSKLK	8	82	504.2975271769007	1006.5805014206014	2	504.29718017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QQLYSKLK_	REV__ENSG00000164113|ENST00000296513|ADAD1;REV__nc|ENSG00000164113|Q96M93-2|ADAD1;REV__nc|ENSG00000164113|Q96M93-3|ADAD1	54.776311868738084	0.5534952410049249	4				NaN	NaN	0	NaN	3928	2675	6599
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6606	20.402	NaN	6506.2	30	0	1885.3	0.036				-1	 	0	60	352.85705264130127	1055.5493285241039	3	352.8575744628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3929	2675	6599
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6624	20.438	NaN	21027	30	0	3491.2	0.214			+	-1	QSLKMQMNA	9	85	541.7514540056906	1081.488355078181	2	541.7525024414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_QSLKM(Oxidation (M))QM(Oxidation (M))NA_	REV__ENSG00000198838|ENST00000634891|RYR3;REV__nc|ENSG00000198838|Q15413-2|RYR3;REV__nc|ENSG00000198838|Q15413-3|RYR3;REV__RYR3|p.E3943Rfs*18|1|0.12|ENSG00000198838|chr15:33837800-33837801|-/A|frameshift_variant;REV__RYR3|p.N4580Mfs*8|1|0.37|ENSG00000198838|chr15:33853618-33853618|A/-|frameshift_variant	60.97194046774394	0.20551255781574032	4				NaN	NaN	0	NaN	3944	2678	6623
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6625	20.442	NaN	11413	30	0	2654.8	0.106	+			48879	VVDCGTGYTK	10	83	550.2577416319864	1098.5009303307727	2	550.258544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_VVDC(Carbamidomethyl (C))GTGYTK_	ACTR3B-JMJD1C|1|fusion;ENSG00000115091|ENST00000263238|ACTR3;ENSG00000133627|ENST00000256001|ACTR3B;nc|ENSG00000133627|Q9P1U1-3|ACTR3B	148.6902309647307	0.008728094565931875	4				NaN	NaN	0	NaN	3945	2678	6623
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6626	20.444	NaN	16283	30	0	2172.5	0.106	+			2549	AQAQPFGSK	9	84	467.24257177604346	932.470590618887	2	467.2427978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AQAQPFGSK_	ENSG00000115648|ENST00000264605|MLPH;ENST00000468178.5_1_2:238402069-238454213:+|nuORF;nc|ENSG00000115648|Q9BV36-2|MLPH;nc|ENSG00000115648|Q9BV36-3|MLPH;nc|ENSG00000115648|Q9BV36-4|MLPH;nc|ENSG00000115648|Q9BV36-5|MLPH	78.26377905018397	0.10505600812668463	4				NaN	NaN	0	NaN	3946	2678	6623
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6627	20.446	NaN	5261.2	30	0	1971.5	0.106	+			8926	EEVQFLGDRG	10	65	575.2809686784977	1148.5473844237954	2	575.2822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EEVQFLGDRG_	AK9|p.A1133V|1|0.3|ENSG00000155085|chr6:109533423-109533423|G/A|missense_variant	87.69643885390035	0.14426223466775756	4				NaN	NaN	0	NaN	3947	2678	6623
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6628	20.448	NaN	18283	30	0	6326.3	0.106				-1	 	0	75	364.737787989	727.4610230448001	2	364.7380676269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3948	2678	6623
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6629	20.45	NaN	15141	30	0	2148.4	0.034	+			29765	PHYHSFDG	8	84	480.2033143768914	958.3920758205828	2	480.2034606933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PHYHSFDG_	ENSG00000275395|ENST00000616721|FCGBP;ENSG00000275395|ENST00000616721|FCGBP;FCGBP-ACSS2|1|fusion;FCGBP-ACSS2|1|fusion;nc|ENSG00000275395|Q9Y6R7|FCGBP;nc|ENSG00000275395|Q9Y6R7|FCGBP;nc|ENSG00000275395|Q9Y6R7|FCGBP	105.26878712358291	0.24777199087279123	4				NaN	NaN	0	NaN	3949	2678	6623
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6630	20.45	NaN	6560.8	30	0	1155.4	0.138			+	29636	PGGFPRKQ	8	64	443.7477373524146	885.4809217716293	2	443.74798583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PGGFPRKQ_	REV__nc|ENSG00000129673|Q16613-2|AANAT	42.47446043378293	0.6409579893742323	4				NaN	NaN	0	NaN	3950	2678	6623
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6648	20.489	NaN	35563	30	0	6572.8	0.215				-1	 	0	102	457.78652758277383	913.5585022323477	2	457.7868347167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3965	2681	6647
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6649	20.492	NaN	17464	30	0	2109.8	0.106	+			20960	KKEEEELVA	9	88	537.7872915679609	1073.5600302027217	2	537.788330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KKEEEELVA_	ENSG00000105048|ENST00000588981|TNNT1;ENSG00000130595|ENST00000278317|TNNT3;ENST00000592920.5_1_19:55652034-55658489:-|nuORF;nc|ENSG00000105048|P13805-2|TNNT1;nc|ENSG00000105048|P13805-3|TNNT1;nc|ENSG00000130595|P45378-3|TNNT3;nc|ENSG00000130595|P45378-4|TNNT3;nc|ENSG00000130595|P45378-5|TNNT3;nc|ENSG00000130595|P45378-6|TNNT3;nc|ENSG00000130595|P45378-7|TNNT3;nc|ENSG00000130595|P45378|TNNT3	64.20726635412375	0.17854274437659667	4				NaN	NaN	0	NaN	3966	2681	6647
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6650	20.494	NaN	17940	30	0	3946.7	0.106	+			29696	PGYKIKSRV	9	74	349.8813065102391	1046.6220901309173	3	349.8817443847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PGYKIKSRV_	ENSG00000146285|ENST00000369020|SCML4	36.446750945000026	0.4619375763483977	4				NaN	NaN	0	NaN	3967	2681	6647
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6651	20.496	NaN	29449	30	0	7394.9	0.106	+			39253	STAMNGNLAK	10	89	503.7520046506512	1005.4894563681024	2	503.7528381347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STAMNGNLAK_	ENSG00000184675|ENST00000374869|AMER1	118.74307786436346	0.029104951601466193	4				NaN	NaN	0	NaN	3968	2681	6647
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6652	20.498	NaN	18594	30	0	2494	0.106	+			46993	VKSFRVLQA	9	83	524.3183316130319	1046.6221102928637	2	524.3192138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VKSFRVLQA_	ENSG00000139163|ENST00000266517|ETNK1;nc|ENSG00000139163|Q9HBU6-2|ETNK1;nc|ENSG00000139163|Q9HBU6|ETNK1	66.96192283764107	0.15557981141143568	4				NaN	NaN	0	NaN	3969	2681	6647
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6653	20.5	NaN	13103	30	0	1624.1	0.035	+			1074	AEKYAKESL	9	75	519.7765768340848	1037.5386007349696	2	519.7772216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEKYAKESL_	ENSG00000100567|ENST00000216455|PSMA3;ENST00000557290.1_1_14:58737043-58738610:+|nuORF;nc|ENSG00000100567|P25788-2|PSMA3	117.5257442709337	0.022697614825424036	4				NaN	NaN	0	NaN	3970	2681	6647
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6654	20.5	NaN	24803	30	0	5973.5	0.139				-1	 	0	90	441.7372686884451	881.4599844436902	2	441.7373352050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3971	2681	6647
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6672	20.54	NaN	208650	30	0	26443	0.173				-1	 	0	111	544.7713388942705	1087.5281248553408	2	544.7723999023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3986	2684	6671
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6673	20.543	NaN	104900	30	0	21803	0.106				-1	 	0	95	363.5166364751215	1087.5280800255646	3	363.5172119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3987	2684	6671
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6674	20.545	NaN	45201	30	0	9945.9	0.106	+			48988	VVGKPIEVQK	10	99	548.8395032719457	1095.6644536106912	2	548.8405151367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVGKPIEVQK_	ENSG00000166391|ENST00000198801|MOGAT2;nc|ENSG00000166391|Q3SYC2-2|MOGAT2	139.15298810987372	0.010979919232517382	4				NaN	NaN	0	NaN	3988	2684	6671
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6675	20.546	NaN	31380	30	0	9814	0.106			+	-1	LCSLDMPEG	9	75	490.70652313426706	979.3984933353341	2	490.7069396972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_LCSLDM(Oxidation (M))PEG_	REV__CC2D1A|p.V306M|1|0.31|ENSG00000132024|chr19:13918546-13918546|G/A|missense_variant	38.80614096846853	0.43426287593479557	4				NaN	NaN	0	NaN	3989	2684	6671
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6676	20.548	NaN	33098	30	0	6844.1	0.106	+			29680	PGRSLTPC	8	83	415.7129833707906	NaN	0	415.7130126953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PGRSLTPC_	ENST00000394986.5_1_4:90757962-90758253:-|nuORF;ENST00000394991.7_1_4:90756762-90758367:-|nuORF	68.484700416344	1.7418937515398478	4				NaN	NaN	0	NaN	3990	2684	6671
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6677	20.55	NaN	34837	30	0	17005	0.106				-1	 	0	79	366.2285394839344	1095.6637890520033	3	366.2289733886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3991	2684	6671
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6678	20.552	NaN	6753.1	30	0	578.32	0.034	+			562	ADGKKLLVQ	9	81	486.2975568692327	970.5805608052655	2	486.2977294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ADGKKLLVQ_	DNAH3|p.E3315Dfs*37|1|0.1|ENSG00000158486|chr16:20963939-20963940|-/A|frameshift_variant;DNAH3|p.V2829Yfs*9|1|0.43|ENSG00000158486|chr16:20965399-20965399|C/-|frameshift_variant;ENSG00000158486|ENST00000698260|DNAH3;nc|ENSG00000158486|Q8TD57|DNAH3	42.396135135203025	0.392153681582562	4				NaN	NaN	0	NaN	3992	2684	6671
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6696	20.588	NaN	31992	30	0	27883	0.215	+			42570	TASNTIACIQI	11	58	378.8649516387079	NaN	0	378.8648681640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TASNTIACIQI_	ENST00000494730.2_1_22:25436553-25570783:+|nuORF	29.170058357718403	0.43541742044178583	4				NaN	NaN	0	NaN	4007	2687	6695
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6697	20.592	NaN	39520	30	0	13210	0.106				-1	SAVLMARIYR	10	64	399.2270977923738	1194.6594639773214	3	399.2274475097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_SAVLM(Oxidation (M))ARIYR_	ENST00000418040.5_1_7:134331590-134346220:+|nuORF	35.15202426646627	0.5927656479315102	4				NaN	NaN	0	NaN	4008	2687	6695
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6698	20.594	NaN	9753.6	30	0	1427.5	0.106			+	10197	ETDRYFLQ	8	88	357.8412426028676	1070.5018984088028	3	357.84173583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ETDRYFLQ_	REV__ENSG00000197694|ENST00000372739|SPTAN1;REV__nc|ENSG00000197694|Q13813-3|SPTAN1;REV__nc|ENSG00000197694|Q13813|SPTAN1;REV__SPTAN1|p.T595Lfs*44|1|0.28|ENSG00000197694|chr9:128582823-128582823|A/-|frameshift_variant	34.172542307311794	0.6954784234644539	4				NaN	NaN	0	NaN	4009	2687	6695
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6699	20.596	NaN	17093	30	0	2547.6	0.106	+			14756	GTKGPSNVFK	10	87	517.7846766092293	1033.5548002852586	2	517.7852783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTKGPSNVFK_	ENSG00000039123|ENST00000230640|MTREX	77.28774426308219	0.21777985819004636	4				NaN	NaN	0	NaN	4010	2687	6695
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6700	20.598	NaN	5559.8	30	0	496.72	0.106			+	45932	VAQWRDRW	8	63	372.86107500824187	1115.5613956249256	3	372.861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VAQWRDRW_	REV__nc|ENSG00000105711|Q07699-2|SCN1B	25.450171626174864	0.7628259754767981	4				NaN	NaN	0	NaN	4011	2687	6695
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6701	20.6	NaN	3803.2	30	0	864.47	0.04			+	-1	SVMVNKPQLLR	11	56	434.2524523757227	1299.7355277273682	3	434.2528076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_SVM(Oxidation (M))VNKPQLLR_	REV__ENSG00000037042|ENST00000251412|TUBG2;REV__ENSG00000131462|ENST00000251413|TUBG1	27.64392233501311	0.6998289966465058	4				NaN	NaN	0	NaN	4012	2687	6695
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6702	20.6	NaN	9494.4	30	0	1716.2	0.142			+	31761	QPFTASLQSVG	11	70	567.7930202204668	1133.5714875077335	2	567.7940063476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QPFTASLQSVG_	REV__ENSG00000179583|ENST00000324288|CIITA;REV__nc|ENSG00000179583|P33076-3|CIITA;REV__nc|ENSG00000179583|P33076|CIITA	51.19269402634007	0.4047928213175833	4				NaN	NaN	0	NaN	4013	2687	6695
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6720	20.64	NaN	69898	30	0	14148	0.168	+			14325	GSYSKAFAR	9	94	493.7560614128716	985.4975698925432	2	493.7564392089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSYSKAFAR_	ENSG00000005175|ENST00000005386|RPAP3;nc|ENSG00000005175|Q9H6T3-2|RPAP3;nc|ENSG00000005175|Q9H6T3-3|RPAP3	166.0711670676379	0.003437550387609957	4				NaN	NaN	0	NaN	4028	2690	6719
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6721	20.642	NaN	31104	30	0	12305	0.106			+	10043	ESCLAKHA	8	78	458.2204560402044	914.4263591472088	2	458.72210693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_ESC(Carbamidomethyl (C))LAKHA_	REV__CON__P00711	42.47446043378293	0.6409579893742323	4				NaN	NaN	0	NaN	4029	2690	6719
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6722	20.644	NaN	14908	30	0	3779.8	0.106	+			14326	GSYSKAFAR	9	53	329.50623902968533	985.496887689256	3	329.5066833496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GSYSKAFAR_	ENSG00000005175|ENST00000005386|RPAP3;nc|ENSG00000005175|Q9H6T3-2|RPAP3;nc|ENSG00000005175|Q9H6T3-3|RPAP3	67.49366992349736	0.1516260258713357	4				NaN	NaN	0	NaN	4030	2690	6719
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6723	20.646	NaN	7427.7	30	0	1363.6	0.106	+			34672	RVSEVLQNR	9	88	550.8130851415995	NaN	0	550.81298828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RVSEVLQNR_	ENSG00000197586|ENST00000376652|ENTPD6;ENST00000471478.1_1_20:25196340-25204798:+|nuORF;ENST00000485936.5_1_20:25203457-25206230:+|nuORF;nc|ENSG00000197586|O75354-2|ENTPD6;nc|ENSG00000197586|O75354-3|ENTPD6	83.6470233535746	0.058886874190800687	4				NaN	NaN	0	NaN	4031	2690	6719
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6724	20.648	NaN	8942	30	0	775.65	0.106	+			46219	VEAKAQQLQ	9	74	507.7819119242885	1013.5492709153771	2	507.78265380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VEAKAQQLQ_	ENSG00000187860|ENST00000338306|CCDC157;ENST00000475975.5_1_22:30767625-30771497:+|nuORF	85.86182877749512	0.07653218437724067	4				NaN	NaN	0	NaN	4032	2690	6719
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6725	20.65	NaN	9984.5	30	0	2158.3	0.106	+			5563	AVAPPTPASK	10	66	469.76830258081435	937.5220522284287	2	469.7689208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AVAPPTPASK_	ENSG00000173894|ENST00000310942|CBX2	60.11826168202944	0.36476464221954025	4				NaN	NaN	0	NaN	4033	2690	6719
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6726	20.652	NaN	5451.8	30	0	2140.5	0.036			+	44309	TSELPYRKS	9	70	540.787117975697	1079.559683018194	2	541.2911376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TSELPYRKS_	REV__ENSG00000184445|ENST00000333479|KNTC1;REV__KNTC1|p.K1646Nfs*2|2|0.35|ENSG00000184445|chr12:122603073-122603073|A/-|frameshift_variant;REV__KNTC1|p.K1646Tfs*12|1|0.13|ENSG00000184445|chr12:122603073-122603074|AA/-|frameshift_variant;REV__KNTC1|p.L1647Tfs*12|1|0.3|ENSG00000184445|chr12:122603072-122603073|-/A|frameshift_variant	27.882242232435846	0.5426732730940306	4				NaN	NaN	0	NaN	4034	2690	6719
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6744	20.689	NaN	27565	30	0	4305.5	0.214	+			44132	TQATIYVHK	9	89	530.7926887313632	1059.5708245295264	2	530.7931518554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TQATIYVHK_	ENSG00000090686|ENST00000308271|USP48;nc|ENSG00000090686|Q86UV5-2|USP48;nc|ENSG00000090686|Q86UV5-5|USP48;nc|ENSG00000090686|Q86UV5-8|USP48;USP48|p.L982Ffs*9|1|0.08|ENSG00000090686|chr1:21690037-21690038|-/GG|frameshift_variant	190.2614974402762	0.00026591377982909756	4				NaN	NaN	0	NaN	4049	2693	6743
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6745	20.693	NaN	35522	30	0	9268	0.106	+			5785	AVGTLQEAK	9	83	458.7580453871483	915.5015378410966	2	458.7583312988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVGTLQEAK_	ENSG00000168453|ENST00000381418|HR;nc|ENSG00000168453|O43593-2|HR	104.01359247289065	0.03510646158778409	4				NaN	NaN	0	NaN	4050	2693	6743
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6746	20.695	NaN	28292	30	0	6407.8	0.106	+			44133	TQATIYVHK	9	104	354.1978675287725	NaN	0	354.1976318359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TQATIYVHK_	ENSG00000090686|ENST00000308271|USP48;nc|ENSG00000090686|Q86UV5-2|USP48;nc|ENSG00000090686|Q86UV5-5|USP48;nc|ENSG00000090686|Q86UV5-8|USP48;USP48|p.L982Ffs*9|1|0.08|ENSG00000090686|chr1:21690037-21690038|-/GG|frameshift_variant	95.81516180277367	0.029873745472008544	4				NaN	NaN	0	NaN	4051	2693	6743
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6747	20.697	NaN	11042	30	0	1858.2	0.106			+	9048	EGGADTGRL	9	66	438.21396977642576	874.4133866196515	2	438.2141418457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EGGADTGRL_	REV__ENST00000447595.1_1_1:179054682-179054961:+|nuORF	47.657333605630114	0.33044192980041115	4				NaN	NaN	0	NaN	4052	2693	6743
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6748	20.698	NaN	18283	30	0	4691.3	0.106	+			18462	ISENSTTCRK	10	82	380.188979437862	1137.545108913786	3	380.1889953613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ISENSTTCRK_	ENST00000499522.6_1_8:104258868-104279674:-|nuORF	40.77816245573522	0.5419747034533848	4				NaN	NaN	0	NaN	4053	2693	6743
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6749	20.7	NaN	9594.9	30	0	2005.8	0.035	+			43343	TGATLYLLR	9	71	336.5342518593517	NaN	0	336.5342712402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TGATLYLLR_	ENSG00000189043|ENST00000339600|NDUFA4;ENST00000486007.1_1_7:10977674-10979684:-|nuORF;NDUFA4|p.A37T|1|0.4|ENSG00000189043|chr7:10938830-10938830|C/T|missense_variant	24.20275056022122	0.35506675290109213	4				NaN	NaN	0	NaN	4054	2693	6743
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6750	20.701	NaN	5911.4	30	0	667.82	0.14			+	45718	VAASFLSFK	9	82	485.2720174990594	968.5294820649189	2	485.27166748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VAASFLSFK_	REV__ENSG00000164051|ENST00000395694|CCDC51;REV__nc|ENSG00000164051|Q96ER9-2|CCDC51	53.351449002276354	0.2690372970092375	4				NaN	NaN	0	NaN	4055	2693	6743
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6768	20.74	NaN	122750	30	0	91161	0.214	+			45883	VAPEEHPV	8	78	439.2239699336072	876.4333869340144	2	439.2240295410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VAPEEHPV_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;POTEF|p.L804P|1|0.35|ENSG00000196604|chr2:130075061-130075061|A/G|missense_variant	88.64286706044652	0.2815785716369046	4				NaN	NaN	0	NaN	4070	2696	6767
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6769	20.744	NaN	43976	30	0	3838	0.106	+			34315	RTMSEAALVRK	11	105	421.24017486295907	1260.6986951890772	3	421.2396545410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RTMSEAALVRK_	ENSG00000169435|ENST00000307439|RASSF6;nc|ENSG00000169435|Q6ZTQ3-3|RASSF6;nc|ENSG00000169435|Q6ZTQ3-4|RASSF6;nc|ENSG00000169435|Q6ZTQ3|RASSF6;RASSF6|p.K253Nfs*25|1|0.16|ENSG00000169435|chr4:73582195-73582195|T/-|frameshift_variant	99.73179938255973	0.06124157796180628	4				NaN	NaN	0	NaN	4071	2696	6767
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6770	20.746	NaN	30268	30	0	11334	0.106				-1	ANMASLSAMGK	11	88	548.7590229860889	1095.5034930389777	2	548.760009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_ANMASLSAM(Oxidation (M))GK_	CREBBP|p.Q2411Sfs*2|1|0.24|ENSG00000005339|chr16:3727816-3727816|G/-|frameshift_variant;CREBBP|p.S976Pfs*22|1|0.09|ENSG00000005339|chr16:3769309-3769309|G/-|frameshift_variant;ENSG00000005339|ENST00000262367|CREBBP;nc|ENSG00000005339|Q92793-2|CREBBP	70.8162118820467	0.22893521292419713	4				NaN	NaN	0	NaN	4072	2696	6767
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6771	20.748	NaN	101920	30	0	39645	0.106	+			15169	GTSGLSSLK	9	82	425.23700471598175	848.4594564987635	2	425.2372131347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTSGLSSLK_	ENSG00000173064|ENST00000682272|HECTD4;HECTD4|p.A3108Gfs*4|1|0.12|ENSG00000173064|chr12:112185242-112185243|CC/-|frameshift_variant;HECTD4|p.A3108Rfs*26|1|0.37|ENSG00000173064|chr12:112185242-112185242|C/-|frameshift_variant;HECTD4|p.A4187Pfs*44|1|0.07|ENSG00000173064|chr12:112163201-112163201|C/-|frameshift_variant;HECTD4|p.L1880Pfs*22|1|0.19|ENSG00000173064|chr12:112231674-112231675|-/TAGGA|frameshift_variant;nc|ENSG00000173064|Q9Y4D8-2|HECTD4;nc|ENSG00000173064|Q9Y4D8-3|HECTD4;nc|ENSG00000173064|Q9Y4D8-4|HECTD4;nc|ENSG00000173064|Q9Y4D8-5|HECTD4;nc|ENSG00000173064|Q9Y4D8|HECTD4	161.89823264540465	0.004149850016316161	4				NaN	NaN	0	NaN	4073	2696	6767
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6772	20.749	NaN	20827	30	0	4665.4	0.106				-1	EAAAGCISNI	10	83	503.2364163195617	1004.4582797059235	2	503.23699951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_EAAAGC(Carbamidomethyl (C))ISNI_	ENSG00000169126|ENST00000305242|ODAD2	77.31757898189308	0.2175361111083648	4				NaN	NaN	0	NaN	4074	2696	6767
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6773	20.751	NaN	10631	30	0	1058.2	0.034				-1	TLVSFCEV	8	70	477.73487789009295	953.4552028469859	2	477.735107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_TLVSFC(Carbamidomethyl (C))EV_	ENST00000225737.10_1_17:19844264-19845154:-|nuORF	40.5726180659479	0.6527593143185008	4				NaN	NaN	0	NaN	4075	2696	6767
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6774	20.752	NaN	16038	30	0	4245.3	0.143			+	18817	ITVSCHLKNV	10	90	371.8727891125389	1112.5965379378167	3	371.8731689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ITVSCHLKNV_	REV__nc|ENSG00000179915|Q9ULB1-3|NRXN1	33.921630207806714	0.6028135429846169	4				NaN	NaN	0	NaN	4076	2696	6767
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6792	20.792	NaN	29789	30	0	6361.7	0.214				-1	 	0	74	326.53406196727775	976.5803565020333	3	326.53466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4091	2699	6791
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6793	20.796	NaN	28295	30	0	3332.9	0.106	+			22131	KSPEKDVPM	9	89	515.7645554688222	1029.5145580044443	2	515.765869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KSPEKDVPM_	ENSG00000065000|ENST00000643116|AP3D1;nc|ENSG00000065000|O14617-2|AP3D1;nc|ENSG00000065000|O14617-3|AP3D1;nc|ENSG00000065000|O14617|AP3D1	109.47833844074708	0.029530294723441826	4				NaN	NaN	0	NaN	4092	2699	6791
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6794	20.798	NaN	17146	30	0	2375.8	0.106	+			36293	SEREMRNTL	9	92	568.2792755170019	1134.5439981008037	2	568.280517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEREMRNTL_	ENSG00000113810|ENST00000357388|SMC4;ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4	82.7504851949679	0.08565546331141553	4				NaN	NaN	0	NaN	4093	2699	6791
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6795	20.8	NaN	42678	30	0	15458	0.106	+			19224	KAAHLSLKQ	9	88	332.53805155185944	994.5923252557784	3	332.5383605957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KAAHLSLKQ_	CNTN4|p.G935Dfs*35|1|0.41|ENSG00000144619|chr3:3043692-3043692|A/-|frameshift_variant	39.252832667884924	0.4290233611298554	4				NaN	NaN	0	NaN	4094	2699	6791
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6796	20.802	NaN	14711	30	0	4837.1	0.106	+			15235	GTSTGIISK	9	64	432.24482699962357	862.4751010660472	2	432.2453308105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTSTGIISK_	ENSG00000116141|ENST00000366917|MARK1;nc|ENSG00000116141|Q9P0L2-2|MARK1;nc|ENSG00000116141|Q9P0L2-3|MARK1	80.45461616416974	0.09558281504443908	4				NaN	NaN	0	NaN	4095	2699	6791
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6797	20.803	NaN	8945.8	30	0	1059.5	0.037			+	9011	EGAKVRITKL	10	73	372.2360621778967	1113.6863571338902	3	372.23638916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EGAKVRITKL_	REV__ENSG00000166035|ENST00000299022|LIPC	41.080066990542036	0.5391928043837881	4				NaN	NaN	0	NaN	4096	2699	6791
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6815	20.841	NaN	1766200	30	0	424880	0.067	+			5529	AVAIKAMAK	9	94	451.7773227601475	901.540092587095	2	451.7781982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVAIKAMAK_	EIF5A|p.A145P|1|0.15|ENSG00000132507|chr17:7311608-7311608|G/C|missense_variant;ENSG00000132507|ENST00000336458|EIF5A;ENSG00000253626|ENST00000520547|EIF5AL1;nc|ENSG00000132507|P63241-2|EIF5A	143.10689835833298	0.00902249513149409	4				NaN	NaN	0	NaN	4111	2702	6814
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6816	20.842	NaN	593110	30	0	92655	0.048	+			47517	VQNGKHFKF	9	140	368.86974969982356	NaN	0	368.8697204589844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VQNGKHFKF_	ENSG00000163586|ENST00000295834|FABP1	77.31757898189308	0.08057531075035683	4				NaN	NaN	0	NaN	4112	2702	6814
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6817	20.843	NaN	170330	30	0	26106	0.082	+			41084	SVINKVTEK	9	108	509.29978730913274	1016.5850216850655	2	509.30023193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVINKVTEK_	ENSG00000124784|ENST00000379834|RIOK1;RIOK1|p.E533Rfs*20|1|0.19|ENSG00000124784|chr6:7414384-7414385|-/A|frameshift_variant	139.38205640894643	0.01076996779551382	4				NaN	NaN	0	NaN	4113	2702	6814
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6818	20.844	NaN	98331	30	0	27609	0.105	+			12369	GDRGKRGRGRL	11	67	409.9097926438306	1226.7075485316918	3	409.9102783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GDRGKRGRGRL_	SVA_D_dup628|chr7:140430960-140432406:+|1.004965212380795|0.4952733165024275|1.02|477.0|60|2|anti-sense	23.37791116691581	0.7445759747191538	4				NaN	NaN	0	NaN	4114	2702	6814
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6819	20.846	NaN	153250	30	0	32521	0.106			+	47506	VQLEYVPKE	9	112	552.8003505302244	1103.5861481272486	2	552.8011474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VQLEYVPKE_	REV__ENSG00000254415|ENST00000360844|SIGLEC14;REV__nc|ENSG00000268500|O15389|SIGLEC5;REV__SIGLEC14|p.L365Sfs*29|1|0.68|ENSG00000254415|chr19:51643592-51643593|-/A|frameshift_variant;REV__SIGLEC14|p.R203Gfs*13|1|0.26|ENSG00000254415|chr19:51645876-51645876|G/-|frameshift_variant	90.36981228632155	0.0638227155548745	4				NaN	NaN	0	NaN	4115	2702	6814
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6820	20.848	NaN	17398	30	0	1677.6	0.106	+			9465	EKPRDKSY	8	81	511.7680600219697	NaN	0	511.7677307128906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EKPRDKSY_	ENSG00000079150|ENST00000424785|FKBP7;nc|ENSG00000079150|Q9Y680-3|FKBP7	63.30626980617807	1.7418937515398478	4				NaN	NaN	0	NaN	4116	2702	6814
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6821	20.85	NaN	4958.8	30	0	629.3	0.106	+			20013	KEIKGLQNY	9	73	546.8055089740087	1091.5964650148173	2	546.80615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KEIKGLQNY_	ENSG00000164124|ENST00000296529|TMEM144;ENST00000503404.5_1_4:159156813-159174676:+|nuORF	76.7741389293348	0.11149722112137898	4				NaN	NaN	0	NaN	4117	2702	6814
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6822	20.852	NaN	7643.6	30	0	1112.8	0.106			+	21621	KPQLEKPR	8	78	498.30417415505207	994.5937953769042	2	498.3046569824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_KPQLEKPR_	REV__ENSG00000006194|ENST00000219069|ZNF263	60.97194046774394	0.49215940876911696	4				NaN	NaN	0	NaN	4118	2702	6814
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6823	20.853	NaN	13477	30	0	4122.1	0.033			+	24618	LGSAPLRK	8	84	421.2659241376409	840.5172953420819	2	421.26611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	9	Unmodified	_LGSAPLRK_	REV__ENST00000373381.8_2_1:33999406-34006153:-|nuORF	47.91560031466742	0.6071945918984287	4				NaN	NaN	0	NaN	4119	2702	6814
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6841	20.89	NaN	93531	30	0	20992	0.213				-1	 	0	97	473.76323586549034	945.5119187977807	2	473.763427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4134	2705	6840
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6842	20.893	NaN	68945	30	0	21847	0.106				-1	 	0	76	403.55883417003315	1207.6546731102994	3	403.5592346191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4135	2705	6840
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6843	20.895	NaN	13119	30	0	2494.9	0.106	+			48583	VTQNGGLYK	9	79	490.2635515897669	978.5125502463338	2	490.2637634277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTQNGGLYK_	ENSG00000100596|ENST00000216484|SPTLC2	155.5846463517096	0.005567437401040498	4				NaN	NaN	0	NaN	4136	2705	6840
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6844	20.897	NaN	53894	30	0	12999	0.106			+	-1	AVSSCVMK	8	90	449.2119226315389	896.4092923298779	2	449.21209716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_AVSSC(Carbamidomethyl (C))VM(Oxidation (M))K_	REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-10|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-13|TTN;REV__nc|ENSG00000155657|Q8WZ42-2|TTN;REV__nc|ENSG00000155657|Q8WZ42-3|TTN;REV__nc|ENSG00000155657|Q8WZ42-4|TTN;REV__nc|ENSG00000155657|Q8WZ42-5|TTN;REV__nc|ENSG00000155657|Q8WZ42-7|TTN;REV__nc|ENSG00000155657|Q8WZ42-8|TTN;REV__nc|ENSG00000155657|Q8WZ42-9|TTN;REV__nc|ENSG00000155657|Q8WZ42|TTN;REV__TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;REV__TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;REV__TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;REV__TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;REV__TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;REV__TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant	71.29570347882199	0.39610197767395533	4				NaN	NaN	0	NaN	4137	2705	6840
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6845	20.899	NaN	22969	30	0	3359.8	0.106	+			47669	VSDPSSPQYGK	11	86	582.7796939891108	1163.5448350450215	2	582.7803955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSDPSSPQYGK_	ENSG00000166340|ENST00000299427|TPP1;ENST00000428886.6_1_11:6638445-6640631:-|nuORF;TPP1|p.I484Sfs*4|1|0.24|ENSG00000166340|chr11:6614968-6614968|C/-|frameshift_variant	183.72194652814687	5.7103426921105755E-06	4				NaN	NaN	0	NaN	4138	2705	6840
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6846	20.901	NaN	17319	30	0	5598.7	0.037			+	-1	ILYTLLLLC	9	62	374.5604438313741	1120.6595020943223	3	374.5606689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_ILYTLLLLC(Carbamidomethyl (C))_	REV__ENSG00000119812|ENST00000238823|FAM98A	35.61828744233558	0.47037581924408073	4				NaN	NaN	0	NaN	4139	2705	6840
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6847	20.901	NaN	23751	30	0	2264.3	0.14	+			21726	KQLEDGRTL	9	90	530.2937131872885	NaN	0	530.2937622070312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KQLEDGRTL_	ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000399822.2_1_9:22012279-22012411:+|nuORF;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;UBB|p.D191Tfs*35|2|0.18|ENSG00000170315|chr17:16382471-16382471|C/-|frameshift_variant;UBB|p.D191Tfs*35|2|0.18|ENSG00000170315|chr17:16382471-16382471|C/-|frameshift_variant	90.60085204095205	0.040385177724871185	4				NaN	NaN	0	NaN	4140	2705	6840
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6865	20.94	NaN	889780	30	0	522080	0.12				-1	 	0	64	384.7719980002254	767.5294430672508	2	384.7724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4155	2708	6864
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6866	20.942	NaN	83342	30	0	19737	0.106	+			5350	ATVTPSPVK	9	98	450.26306588224935	898.5115788312987	2	450.2635192871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATVTPSPVK_	ENSG00000069275|ENST00000367142|NUCKS1;nc|ENSG00000069275|Q9H1E3-2|NUCKS1	104.0567914643314	0.03506238181059741	4				NaN	NaN	0	NaN	4156	2708	6864
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6867	20.944	NaN	28997	30	0	15641	0.106	+			34641	RVQEAVESMVK	11	84	646.336346428492	1290.658139923784	2	646.337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_RVQEAVESM(Oxidation (M))VK_	ENSG00000035141|ENST00000430566|FAM136A;ENST00000460307.1_1_2:70528513-70529143:-|nuORF;ENST00000498665.1_1_2:70527944-70529143:-|nuORF;nc|ENSG00000035141|Q96C01|FAM136A	116.83681978309235	0.026261437461494754	4				NaN	NaN	0	NaN	4157	2708	6864
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6868	20.946	NaN	10412	30	0	1721	0.106	+			46346	VEKPAETHL	9	70	512.275599275666	1022.536645618132	2	512.27734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VEKPAETHL_	ENSG00000198171|ENST00000354488|DDRGK1;nc|ENSG00000198171|Q96HY6-2|DDRGK1	93.1432384553994	0.056003526918089595	4				NaN	NaN	0	NaN	4158	2708	6864
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6869	20.948	NaN	11013	30	0	3190.4	0.106	+			32424	QVHNWKAG	8	68	470.2427251725385	938.470897411877	2	470.24285888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QVHNWKAG_	ENST00000271688.10_1_1:150938750-150939000:-|nuORF	42.47446043378293	0.6409579893742323	4				NaN	NaN	0	NaN	4159	2708	6864
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6870	20.949	NaN	11430	30	0	1773.8	0.106	+			37178	SIYKPGQTVK	10	80	560.8210762883317	1119.6275996434633	2	560.822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SIYKPGQTVK_	ENSG00000175899|ENST00000318602|A2M	72.2432373244024	0.2589930451692646	4				NaN	NaN	0	NaN	4160	2708	6864
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6871	20.951	NaN	18667	30	0	3569	0.034	+			39585	STGPTLQAR	9	85	465.7527302895555	929.490907645911	2	465.75372314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STGPTLQAR_	CFTR|p.E1044Dfs*20|1|0.04|ENSG00000001626|chr7:117610661-117610662|-/TCAAAGAAAAC|frameshift_variant;CFTR|p.G1208Afs*3|1|0.3|ENSG00000001626|chr7:117627672-117627672|G/-|frameshift_variant;CFTR|p.L1258Ffs*7|1|0.26|ENSG00000001626|chr7:117642487-117642488|-/T|frameshift_variant;CFTR|p.S1297Lfs*31|1|0.28|ENSG00000001626|chr7:117652852-117652852|T/-|frameshift_variant;ENSG00000001626|ENST00000003084|CFTR;nc|ENSG00000001626|P13569-2|CFTR	68.84614121027924	0.14577793175421136	4				NaN	NaN	0	NaN	4161	2708	6864
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6872	20.952	NaN	7163.3	30	0	2228.2	0.138				-1	 	0	61	334.72741694238795	667.4402809515759	2	334.72784423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4162	2708	6864
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6890	20.989	NaN	197400	30	0	27992	0.138	+			6075	AVNAHSNILK	10	86	533.8029791471657	1065.5914053611314	2	533.8037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVNAHSNILK_	ENSG00000132305|ENST00000410111|IMMT;ENST00000409258.2_1_2:86386442-86398424:-|nuORF;ENST00000435590.1_1_21:46097057-46097849:-|nuORF;ENST00000474969.5_1_2:86385703-86422514:-|nuORF;ENST00000490238.5_1_2:86389097-86393741:-|nuORF;nc|ENSG00000132305|Q16891-2|IMMT;nc|ENSG00000132305|Q16891-3|IMMT;nc|ENSG00000132305|Q16891-4|IMMT	140.11223852658463	0.010724162804194332	4				NaN	NaN	0	NaN	4177	2711	6889
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6891	20.992	NaN	34630	30	0	12359	0.106			+	48136	VSVRYVSQT	9	64	346.85704134703394	1037.549294641302	3	346.8575134277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSVRYVSQT_	REV__ENSG00000253873|ENST00000398587|PCDHGA11;REV__nc|ENSG00000253873|Q9Y5H2-2|PCDHGA11;REV__nc|ENSG00000253873|Q9Y5H2-3|PCDHGA11;REV__PCDHGA11|p.N380Kfs*10|1|0.29|ENSG00000253873|chr5:141422362-141422363|-/A|frameshift_variant;REV__PCDHGA11|p.R724Afs*19|1|0.34|ENSG00000253873|chr5:141423397-141423397|C/-|frameshift_variant	24.519189625965996	0.574102787014149	4				NaN	NaN	0	NaN	4178	2711	6889
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6892	20.994	NaN	45860	30	0	6580.3	0.106	+			36083	SEKDTKQIL	9	93	531.2948279809895	1060.5751030287788	2	531.2957763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEKDTKQIL_	ENSG00000183207|ENST00000595090|RUVBL2;ENST00000596247.5_1_19:49507512-49519096:+|nuORF;nc|ENSG00000183207|Q9Y230-2|RUVBL2	131.115847015877	0.014647977962315902	4				NaN	NaN	0	NaN	4179	2711	6889
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6893	20.995	NaN	25596	30	0	9927.4	0.106			+	23817	LCRCIVLEL	9	90	354.53262891767224	NaN	0	354.53277587890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LCRCIVLEL_	REV__ENSG00000236396|ENST00000588001|SLC35G4	58.78195531508484	0.1545138866451181	4				NaN	NaN	0	NaN	4180	2711	6889
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6894	20.997	NaN	9177.4	30	0	957.11	0.106	+			11143	FGGLGSKSK	9	79	440.7476399781838	879.4807270231677	2	440.74786376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FGGLGSKSK_	ENSG00000124942|ENST00000378024|AHNAK	136.26810882979174	0.012230845423532208	4				NaN	NaN	0	NaN	4181	2711	6889
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6895	20.999	NaN	17635	30	0	3069.6	0.106	+			16140	HEAEGHIVTC	10	82	548.2471695431346	1094.4797861530692	2	548.2481689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HEAEGHIVTC_	ENSG00000100028|ENST00000215829|SNRPD3;ENST00000468770.1_1_22:24953642-24953888:+|nuORF;nc|ENSG00000286070|P62318-2|SNRPD3	125.81401957644128	0.019118290118313203	4				NaN	NaN	0	NaN	4182	2711	6889
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6896	21.001	NaN	5325.6	30	0	455.96	0.038	+			33189	REVSSLKNKL	10	69	391.9029620661284	1172.6870567985852	3	391.9031677246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_REVSSLKNKL_	ENSG00000100345|ENST00000216181|MYH9;nc|ENSG00000100345|P35579-2|MYH9;SYNDIG1-MYH9|1|fusion	54.343338949951054	0.4172868656359992	4				NaN	NaN	0	NaN	4183	2711	6889
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6914	21.038	NaN	16878	30	0	3393.2	0.214				-1	 	0	84	511.27928912444514	1020.5440253156903	2	511.2799377441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4198	2714	6913
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6915	21.042	NaN	12114	30	0	1410.3	0.106			+	-1	GMLAPSRPR	9	90	500.7707558978957	999.5269588625914	2	500.77130126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_GM(Oxidation (M))LAPSRPR_	REV__IQCE|p.C514Afs*50|1|0.24|ENSG00000106012|chr7:2598559-2598559|C/-|frameshift_variant	37.81151784470057	0.4459294069877048	4				NaN	NaN	0	NaN	4199	2714	6913
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6916	21.044	NaN	9344.2	30	0	2623.8	0.106	+			14035	GSGKVTFPK	9	80	460.76306609951286	919.5115792658257	2	460.7634582519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GSGKVTFPK_	AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK	117.5257442709337	0.022697614825424036	4				NaN	NaN	0	NaN	4200	2714	6913
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6917	21.046	NaN	15616	30	0	4483.3	0.106			+	21029	KKKGLNSELLF	11	78	426.2593874068034	1275.7563328206102	3	426.2598571777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KKKGLNSELLF_	REV__ENSG00000134294|ENST00000256689|SLC38A2;REV__SLC38A2|p.F332Cfs*28|1|0.09|ENSG00000134294|chr12:46363785-46363786|-/CAAAAACAAAAAC|frameshift_variant	29.550750289552195	0.6798279264880025	4				NaN	NaN	0	NaN	4201	2714	6913
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6918	21.048	NaN	10473	30	0	5059	0.106				-1	 	0	62	444.2448356571194	886.4751183810388	2	444.2449035644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4202	2714	6913
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6919	21.049	NaN	15222	30	0	2551.2	0.035	+			12602	GEHPKRRK	8	83	504.2975271769007	1006.5805014206014	2	504.2955627441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GEHPKRRK_	ENSG00000070495|ENST00000397625|JMJD6;nc|ENSG00000070495|Q6NYC1-2|JMJD6;nc|ENSG00000070495|Q6NYC1-3|JMJD6	56.72105179125745	0.5342425954139568	4				NaN	NaN	0	NaN	4203	2714	6913
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6920	21.05	NaN	6313.4	30	0	722.79	0.144	+			17448	IAYKNKLTQ	9	59	360.21273648871613	1077.6163800663485	3	360.21331787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IAYKNKLTQ_	ENSG00000129003|ENST00000644861|VPS13C;nc|ENSG00000129003|Q709C8-2|VPS13C;nc|ENSG00000129003|Q709C8-3|VPS13C;nc|ENSG00000129003|Q709C8-4|VPS13C;VPS13C|p.D1169Ifs*15|1|0.38|ENSG00000129003|chr15:61962469-61962469|C/-|frameshift_variant;VPS13C|p.E2463Nfs*18|1|0.25|ENSG00000129003|chr15:61920157-61920157|C/-|frameshift_variant;VPS13C|p.N1066Ifs*25|2|0.27|ENSG00000129003|chr15:61964716-61964716|T/-|frameshift_variant;VPS13C|p.N3163Sfs*6|1|0.05|ENSG00000129003|chr15:61882732-61882733|-/TTATCATCAC|frameshift_variant;VPS13C|p.P3597Lfs*3|1|0.26|ENSG00000129003|chr15:61868732-61868732|G/-|frameshift_variant;VPS13C|p.S1021Hfs*3|1|0.08|ENSG00000129003|chr15:61964852-61964852|A/-|frameshift_variant;VPS13C|p.S463Vfs*3|1|0.39|ENSG00000129003|chr15:61991770-61991771|-/T|frameshift_variant	25.57405402267927	0.5642445186134241	4				NaN	NaN	0	NaN	4204	2714	6913
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6938	21.089	NaN	164600	30	0	19471	0.215	+			1179	AENKEIQKL	9	123	536.8025748144473	1071.5905966956946	2	536.8037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AENKEIQKL_	ENSG00000106541|ENST00000419304|AGR2	201.61192446435922	2.6499037923345906E-05	4				NaN	NaN	0	NaN	4219	2717	6937
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6939	21.092	NaN	12410	30	0	2363	0.106	+			4797	ATNNMNLSR	9	78	510.7478937767106	1019.4812346202212	2	510.7486572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATNNMNLSR_	ENSG00000092148|ENST00000399332|HECTD1;ENST00000556004.1_1_14:31596982-31597923:-|nuORF;HECTD1|p.F2271Lfs*13|1|0.16|ENSG00000092148|chr14:31107059-31107059|A/-|frameshift_variant;HECTD1|p.I2041Lfs*27|1|0.36|ENSG00000092148|chr14:31113133-31113133|T/-|frameshift_variant;HECTD1|p.N1559H|1|0.32|ENSG00000092148|chr14:31128696-31128696|T/G|missense_variant	131.115847015877	0.014647977962315902	4				NaN	NaN	0	NaN	4220	2717	6937
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6940	21.094	NaN	134690	30	0	29710	0.106				-1	 	0	121	358.2041716764463	1071.590685629539	3	358.2044677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4221	2717	6937
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6941	21.096	NaN	22491	30	0	8304.5	0.106	+			20787	KIADMGHLK	9	71	338.19166707129887	NaN	0	338.1916809082031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KIADMGHLK_	ENSG00000132646|ENST00000379143|PCNA	51.19269402634007	0.19847346126499396	4				NaN	NaN	0	NaN	4222	2717	6937
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6942	21.098	NaN	14360	30	0	2186.8	0.106	+			20786	KIADMGHLK	9	76	506.7835058381897	1011.5524587431794	2	506.7839660644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KIADMGHLK_	ENSG00000132646|ENST00000379143|PCNA	131.61620852596164	0.014413238321579053	4				NaN	NaN	0	NaN	4223	2717	6937
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6943	21.1	NaN	20526	30	0	2210.7	0.035	+			33438	RILACGVAK	9	83	494.2918638575071	NaN	0	494.291748046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_RILAC(Carbamidomethyl (C))GVAK_	ENSG00000265972|ENST00000582401|TXNIP	131.03138772384656	0.00042866051192282686	4				NaN	NaN	0	NaN	4224	2717	6937
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6944	21.1	NaN	14347	30	0	960.88	0.138			+	5573	AVARAGTGAE	10	81	451.73780207840065	NaN	0	451.7378845214844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AVARAGTGAE_	REV__ENST00000341485.9_1_1:154155564-154155654:-|nuORF	42.396135135203025	0.3536752194735987	4				NaN	NaN	0	NaN	4225	2717	6937
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6962	21.138	NaN	249760	30	0	136700	0.148				-1	 	0	76	558.8159457802619	1115.6173386273238	2	558.8170776367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4240	2720	6961
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6963	21.141	NaN	33119	30	0	5623.6	0.094	+			40645	SVAQTVVQK	9	83	480.2788617510736	958.5431705689472	2	480.2790222167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVAQTVVQK_	ENSG00000057294|ENST00000340811|PKP2;nc|ENSG00000057294|Q99959|PKP2	181.4070731898895	0.0011547877412507563	4				NaN	NaN	0	NaN	4241	2720	6961
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6964	21.143	NaN	50496	30	0	6824.4	0.106	+			39359	STCNTKLTLK	10	98	583.3152611085012	1164.6159692838023	2	583.8175048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_STC(Carbamidomethyl (C))NTKLTLK_	ENSG00000169756|ENST00000544547|LIMS1;ENSG00000256671|ENST00000632897|LIMS4;ENSG00000256977|ENST00000480744|LIMS3;nc|ENSG00000169756|P48059-3|LIMS1;nc|ENSG00000169756|P48059-4|LIMS1;nc|ENSG00000169756|P48059-5|LIMS1;nc|ENSG00000169756|P48059|LIMS1	106.88024417677582	0.05726438866303799	4				NaN	NaN	0	NaN	4242	2720	6961
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6965	21.144	NaN	20629	30	0	2349.8	0.106	+			40899	SVFNHAIRH	9	86	540.7878527944944	1079.5611526557886	2	540.7888793945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVFNHAIRH_	ENSG00000273749|ENST00000617928|CYFIP1;KBTBD2-CYFIP1|1|fusion	101.25262130126117	0.03792372629710479	4				NaN	NaN	0	NaN	4243	2720	6961
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6966	21.146	NaN	67130	30	0	7648.6	0.106	+			49777	VYQNHVQHL	9	97	569.2927725792297	1136.5709922252593	2	569.2935180664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VYQNHVQHL_	ARHGAP5|p.E893*|2|0.24|ENSG00000100852|chr14:32093338-32093339|-/T|frameshift_variant;ARHGAP5|p.F892Lfs*9|2|0.33|ENSG00000100852|chr14:32093339-32093339|T/-|frameshift_variant;ARHGAP5|p.F935Lfs*5|1|0.32|ENSG00000100852|chr14:32093469-32093469|T/-|frameshift_variant;ARHGAP5|p.N943Kfs*10|1|0.43|ENSG00000100852|chr14:32093489-32093490|-/A|frameshift_variant;ARHGAP5|p.S936*|1|0.32|ENSG00000100852|chr14:32093468-32093469|-/T|frameshift_variant;ARHGAP5|p.Y502Mfs*3|1|0.31|ENSG00000100852|chr14:32092168-32092168|T/-|frameshift_variant;ENSG00000100852|ENST00000345122|ARHGAP5;nc|ENSG00000100852|Q13017-2|ARHGAP5	177.70704754147502	0.0015262242528143724	4				NaN	NaN	0	NaN	4244	2720	6961
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6967	21.148	NaN	28283	30	0	12625	0.106	+			40900	SVFNHAIRH	9	64	360.8610586024306	1079.5613464074918	3	360.86138916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVFNHAIRH_	ENSG00000273749|ENST00000617928|CYFIP1;KBTBD2-CYFIP1|1|fusion	49.44154591367651	0.3095138337212152	4				NaN	NaN	0	NaN	4245	2720	6961
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6968	21.15	NaN	96675	30	0	23972	0.037			+	-1	VCDPKFKMI	9	92	379.86467269928414	1136.5721886980525	3	379.86456298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_VC(Carbamidomethyl (C))DPKFKMI_	REV__ENSG00000065150|ENST00000651721|IPO5;REV__ENST00000468620.1_1_13:98670849-98672064:+|nuORF;REV__ENST00000493122.1_1_13:98671845-98673393:+|nuORF;REV__nc|ENSG00000065150|O00410-2|IPO5;REV__nc|ENSG00000065150|O00410-3|IPO5	42.396135135203025	0.392153681582562	4				NaN	NaN	0	NaN	4246	2720	6961
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6986	21.186	NaN	252410	30	0	39776	0.174				-1	 	0	111	405.7447065511096	809.4748601690192	2	405.74517822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4261	2723	6985
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6987	21.189	NaN	43702	30	0	7745.9	0.106				-1	 	0	88	587.8424473950344	1173.6703418568686	2	587.8433227539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4262	2723	6985
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6988	21.191	NaN	161420	30	0	18165	0.106	+			14205	GSSDVIIHR	9	115	492.26656497652556	982.5185770198511	2	492.26690673828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GSSDVIIHR_	ENSG00000070047|ENST00000264555|PHRF1;ENST00000532550.1_1_11:601671-606691:+|nuORF;nc|ENSG00000070047|Q9P1Y6-2|PHRF1;nc|ENSG00000070047|Q9P1Y6-3|PHRF1;PHRF1|p.E1225Kfs*62|1|0.36|ENSG00000070047|chr11:609125-609125|G/-|frameshift_variant;PHRF1|p.L1393Cfs*8|1|0.38|ENSG00000070047|chr11:609628-609628|C/-|frameshift_variant;PHRF1|p.P938Qfs*23|2|0.45|ENSG00000070047|chr11:608263-608263|C/-|frameshift_variant;PHRF1|p.T1126Pfs*73|1|0.36|ENSG00000070047|chr11:608827-608827|C/-|frameshift_variant	120.8684288430529	0.02067403653475984	4				NaN	NaN	0	NaN	4263	2723	6985
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6989	21.192	NaN	19638	30	0	1243	0.106	+			17752	IEQGNTKAL	9	87	487.26900737177994	NaN	0	487.2690734863281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IEQGNTKAL_	ENSG00000178896|ENST00000316052|EXOSC4	83.6470233535746	0.058886874190800687	4				NaN	NaN	0	NaN	4264	2723	6985
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6990	21.194	NaN	21321	30	0	3356.2	0.106	+			2616	AQIENSAAVEK	11	87	580.3006572399411	1158.586761546682	2	580.3015747070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AQIENSAAVEK_	ENSG00000162645|ENST00000370466|GBP2	204.55985046991364	1.037299315497568E-08	4				NaN	NaN	0	NaN	4265	2723	6985
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6991	21.196	NaN	23847	30	0	2823.2	0.106	+			47518	VQNGKHFKF	9	88	368.86974969982356	NaN	0	368.8697814941406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VQNGKHFKF_	ENSG00000163586|ENST00000295834|FABP1	54.776311868738084	0.17377682019723872	4				NaN	NaN	0	NaN	4266	2723	6985
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6992	21.198	NaN	21586	30	0	8950.3	0.036			+	51431	YVAELEAEL	9	72	346.17799138703714	1035.5121447613114	3	346.17852783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YVAELEAEL_	REV__ENSG00000065989|ENST00000380702|PDE4A;REV__nc|ENSG00000065989|P27815-2|PDE4A;REV__nc|ENSG00000065989|P27815-3|PDE4A;REV__nc|ENSG00000065989|P27815-4|PDE4A;REV__nc|ENSG00000065989|P27815-6|PDE4A;REV__nc|ENSG00000065989|P27815-7|PDE4A	35.200714571348534	0.47427825964483533	4				NaN	NaN	0	NaN	4267	2723	6985
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7010	21.235	NaN	179950	30	0	29686	0.061	+			33937	RSAFTVIRK	9	75	359.88841625052265	1076.643419351768	3	359.88916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RSAFTVIRK_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	84.81729255234993	0.07947707105691067	4				NaN	NaN	0	NaN	4282	2726	7009
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7011	21.236	NaN	109490	30	0	56116	0.068				-1	 	0	48	328.5132054512155	982.5177869538466	3	328.51373291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4283	2726	7009
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7012	21.237	NaN	31066	30	0	12072	0.057	+			12379	GDVIPDDPEI	10	68	357.17316371606205	1068.4976617483862	3	357.1736755371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GDVIPDDPEI_	ENSG00000196338|ENST00000358741|NLGN3;nc|ENSG00000196338|Q9NZ94-2|NLGN3;nc|ENSG00000196338|Q9NZ94-3|NLGN3;NLGN3|p.C544Afs*15|1|0.5|ENSG00000196338|chrX:71167723-71167723|C/-|frameshift_variant	29.14955571784316	0.6417842315402807	4				NaN	NaN	0	NaN	4284	2726	7009
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7013	21.238	NaN	91575	30	0	51408	0.074	+			33938	RSAFTVIRK	9	85	539.3291495281414	1076.6437461230828	2	539.330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RSAFTVIRK_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	60.1669710687717	0.2122228167747824	4				NaN	NaN	0	NaN	4285	2726	7009
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7014	21.239	NaN	28979	30	0	3842.4	0.088	+			46737	VGQPRVSP	8	70	420.23972416117647	838.464895389153	2	420.2401123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VGQPRVSP_	ENST00000461200.5_1_11:2337241-2339151:+|nuORF;ENST00000493924.5_1_11:2337619-2338684:+|nuORF	50.0245360154114	0.5941082100236891	4				NaN	NaN	0	NaN	4286	2726	7009
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7015	21.241	NaN	43153	30	0	5158.5	0.106				-1	 	0	92	535.2559362957518	1068.4973196583035	2	535.2568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4287	2726	7009
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7016	21.242	NaN	13062	30	0	2666.9	0.106				-1	 	0	69	322.50972846740325	964.5073560024098	3	322.51019287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4288	2726	7009
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7017	21.244	NaN	83681	30	0	32647	0.106				-1	 	0	99	316.50625049693497	946.496922091005	3	316.5067138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4289	2726	7009
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7018	21.246	NaN	11530	30	0	2801.2	0.038	+			8246	EAFREHQQY	9	85	604.2778658577741	1206.5411787823482	2	604.2782592773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	9	Unmodified	_EAFREHQQY_	ENSG00000133106|ENST00000313624|EPSTI1;ENST00000535677.5_1_13:43491732-43537592:-|nuORF;EPSTI1|p.L289Sfs*24|1|0.42|ENSG00000133106|chr13:42895092-42895093|-/A|frameshift_variant;nc|ENSG00000133106|Q96J88-3|EPSTI1;nc|ENSG00000133106|Q96J88|EPSTI1	126.24258497203832	0.01742065577488747	4				NaN	NaN	0	NaN	4290	2726	7009
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7036	21.284	NaN	13959	30	0	2391.8	0.213	+			6012	AVMDNKNPTIK	11	83	615.82833296334	1229.64211299348	2	615.8290405273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVMDNKNPTIK_	CKAP5|p.K1126Rfs*25|1|0.46|ENSG00000175216|chr11:46767609-46767609|T/-|frameshift_variant;CKAP5|p.V1971Lfs*42|1|0.03|ENSG00000175216|chr11:46744211-46744212|-/TTGAAAAAAAG|frameshift_variant;ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5	191.3291680699648	6.614849320638974E-07	4				NaN	NaN	0	NaN	4305	2729	7035
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7037	21.287	NaN	25030	30	0	13554	0.106				-1	 	0	72	384.7719980002254	767.5294430672508	2	384.77197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4306	2729	7035
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7038	21.289	NaN	26907	30	0	10645	0.106	+			14962	GTMTGMLYK	9	76	517.2376716517601	1032.4607903703202	2	517.238525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Oxidation (M)	_GTM(Oxidation (M))TGM(Oxidation (M))LYK_	ENSG00000178440|ENST00000651763|TIMM23B-AGAP6;ENSG00000204152|ENST00000651259|TIMM23B;ENSG00000265354|ENST00000580018|TIMM23;nc|ENSG00000204152|Q5SRD1-2|TIMM23B	131.03138772384656	0.014687601201650916	4				NaN	NaN	0	NaN	4307	2729	7035
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7039	21.291	NaN	11181	30	0	3064.4	0.106	+			16837	HPDTGISSKAM	11	78	572.2758771382704	1142.5372013433407	2	572.2769165039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HPDTGISSKAM_	ENSG00000124635|ENST00000339812|H2BC11;ENSG00000146047|ENST00000274764|H2BC1;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000196890|ENST00000693095|H2BC26;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000436555.1_1_1:228651947-228652295:-|nuORF;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;nc|ENSG00000203814|Q5QNW6-2|H2BC18	128.60217544463768	0.003645184319602832	4				NaN	NaN	0	NaN	4308	2729	7035
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7040	21.293	NaN	5521.6	30	0	840.23	0.106			+	9017	EGASKSKIE	9	74	474.7535829715039	947.4926130098078	2	474.75323486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EGASKSKIE_	REV__ENST00000490827.1_1_10:62631931-62634780:-|nuORF	75.04331003522576	0.118981335847003	4				NaN	NaN	0	NaN	4309	2729	7035
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7041	21.295	NaN	36606	30	0	6133.6	0.034	+			35805	SEAPGQRAL	9	88	464.74534989927037	NaN	0	464.74542236328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SEAPGQRAL_	ENSG00000114867|ENST00000346169|EIF4G1;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;ENST00000460829.5_1_3:184046782-184052693:+|nuORF;ENST00000478291.1_1_3:184049262-184049734:+|nuORF;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1	95.81516180277367	0.029873745472008544	4				NaN	NaN	0	NaN	4310	2729	7035
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7042	21.295	NaN	7860.7	30	0	986.15	0.139	+			2847	ASALGSSSYK	10	79	485.745214719303	969.4758765054061	2	485.745361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASALGSSSYK_	ENSG00000122965|ENST00000261741|RBM19;RBM19|p.F841Sfs*18|1|0.28|ENSG00000122965|chr12:113915007-113915007|G/-|frameshift_variant	63.42647028704847	0.33467688528802414	4				NaN	NaN	0	NaN	4311	2729	7035
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7060	21.335	NaN	80116	30	0	15848	0.196	+			3070	ASFQSTSVK	9	99	477.74783665822594	953.4811203832519	2	477.7481994628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASFQSTSVK_	ENSG00000050405|ENST00000341247|LIMA1;nc|ENSG00000050405|Q9UHB6-2|LIMA1;nc|ENSG00000050405|Q9UHB6-3|LIMA1;nc|ENSG00000050405|Q9UHB6-4|LIMA1;nc|ENSG00000050405|Q9UHB6-5|LIMA1	131.115847015877	0.014647977962315902	4				NaN	NaN	0	NaN	4326	2732	7059
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7061	21.338	NaN	107060	30	0	64370	0.106	+			23690	LASVSRGPS	9	90	437.2425084198161	872.4704639064322	2	437.24310302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LASVSRGPS_	ENST00000234040.8_1_2:242082343-242082406:-|nuORF	76.7741389293348	0.11149722112137898	4				NaN	NaN	0	NaN	4327	2732	7059
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7062	21.34	NaN	205300	30	0	59274	0.106	+			37106	SISSGPIQK	9	101	458.75786635775586	915.5011797823117	2	458.7586364746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SISSGPIQK_	ENSG00000006611|ENST00000005226|USH1C;nc|ENSG00000006611|Q9Y6N9-2|USH1C;nc|ENSG00000006611|Q9Y6N9-3|USH1C;nc|ENSG00000006611|Q9Y6N9-4|USH1C;nc|ENSG00000006611|Q9Y6N9|USH1C	157.32903759742106	0.0051608477690748295	4				NaN	NaN	0	NaN	4328	2732	7059
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7063	21.342	NaN	8508	30	0	826.94	0.106	+			27204	MEGKINKQL	9	86	530.7946993682923	NaN	0	530.7952270507812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MEGKINKQL_	ENSG00000055044|ENST00000264279|NOP58;ENST00000472050.5_1_2:203130664-203149064:+|nuORF;ENST00000478941.1_1_2:203147084-203155055:+|nuORF;ENST00000488403.5_1_2:203130664-203149205:+|nuORF	89.02883481214508	0.043554178677197526	4				NaN	NaN	0	NaN	4329	2732	7059
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7064	21.344	NaN	19612	30	0	10405	0.106	+			30529	QAIKNGQAL	9	69	471.77153861647514	941.5285242997503	2	471.77203369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QAIKNGQAL_	ENSG00000127603|ENST00000564288|MACF1;nc|ENSG00000127603|O94854|MACF1;nc|ENSG00000127603|Q9UPN3-2|MACF1;nc|ENSG00000127603|Q9UPN3-3|MACF1;nc|ENSG00000127603|Q9UPN3-4|MACF1;nc|ENSG00000127603|Q9UPN3-5|MACF1;nc|ENSG00000127603|Q9UPN3|MACF1	71.29570347882199	0.13518600952103718	4				NaN	NaN	0	NaN	4330	2732	7059
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7065	21.345	NaN	22289	30	0	7245	0.106			+	-1	ENMKLTIGM	9	85	526.7599272818481	1051.5053016304962	2	526.7609252929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_ENM(Oxidation (M))KLTIGM_	REV__CASK|p.N757Tfs*40|1|0.18|ENSG00000147044|chrX:41534753-41534753|T/-|frameshift_variant;REV__ENSG00000147044|ENST00000378163|CASK;REV__ENST00000472704.1_1_X:41411986-41437658:-|nuORF;REV__nc|ENSG00000147044|O14936-2|CASK;REV__nc|ENSG00000147044|O14936-3|CASK;REV__nc|ENSG00000147044|O14936-4|CASK;REV__nc|ENSG00000147044|O14936-5|CASK;REV__nc|ENSG00000147044|O14936-6|CASK	47.657333605630114	0.33044192980041115	4				NaN	NaN	0	NaN	4331	2732	7059
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7066	21.347	NaN	10116	30	0	1205	0.034	+			48653	VTSQVSNLK	9	74	488.27684397099347	974.539135008787	2	488.2772216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VTSQVSNLK_	ENSG00000132952|ENST00000255304|USPL1;nc|ENSG00000132952|Q5W0Q7-2|USPL1	109.43880257439609	0.029570636687953285	4				NaN	NaN	0	NaN	4332	2732	7059
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7084	21.383	NaN	45442	30	0	4617.3	0.214				-1	 	0	103	513.7820115630386	1025.5494701928772	2	513.7825927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4347	2735	7083
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7085	21.387	NaN	17858	30	0	2554.7	0.106	+			42621	TAVCHTDAY	9	86	519.2205056621997	1036.4264583911993	2	519.2215576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_TAVC(Carbamidomethyl (C))HTDAY_	ENSG00000197894|ENST00000296412|ADH5;ENST00000507102.5_2_4:100003111-100009857:-|nuORF;ENST00000508511.5_1_4:99997418-100009857:-|nuORF;ENST00000512621.5_1_4:99993722-100006301:-|nuORF	120.62098272573253	0.020823834273767324	4				NaN	NaN	0	NaN	4348	2735	7083
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7086	21.389	NaN	6625.7	30	0	1570.4	0.106			+	-1	PTKKKLMDD	9	62	364.53127763232374	1090.5720034971712	3	364.5319519042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_PTKKKLM(Oxidation (M))DD_	REV__ENSG00000257591|ENST00000439556|ZNF625;REV__nc|ENSG00000257591|Q96I27|ZNF625;REV__ZNF625|p.K161Nfs*23|1|0.41|ENSG00000257591|chr19:12145936-12145936|C/-|frameshift_variant	29.170058357718403	0.5306379469863586	4				NaN	NaN	0	NaN	4349	2735	7083
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7087	21.391	NaN	31011	30	0	6011.5	0.106			+	29078	NTLMRQMIQ	9	85	575.7894498742621	1149.5643468153241	2	575.7909545898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_NTLMRQM(Oxidation (M))IQ_	REV__TMEFF2|p.I184Tfs*72|1|0.06|ENSG00000144339|chr2:191999194-191999195|-/GG|frameshift_variant	101.60071028292904	0.0375685401170269	4				NaN	NaN	0	NaN	4350	2735	7083
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7088	21.392	NaN	7181.2	30	0	570.53	0.106				-1	QQQMKQQI	8	77	524.2656897593389	1046.5168265854777	2	524.2664184570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_QQQM(Oxidation (M))KQQI_	CREBBP|p.Q2411Sfs*2|1|0.24|ENSG00000005339|chr16:3727816-3727816|G/-|frameshift_variant;ENSG00000005339|ENST00000262367|CREBBP;nc|ENSG00000005339|Q92793-2|CREBBP	50.0245360154114	0.5941082100236891	4				NaN	NaN	0	NaN	4351	2735	7083
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7089	21.394	NaN	8607.6	30	0	1769.7	0.035	+			43417	TGKISFKNL	9	67	336.5342518593517	NaN	0	336.5342712402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TGKISFKNL_	ENSG00000147400|ENST00000370277|CETN2;ENSG00000177143|ENST00000327228|CETN1;ENST00000493482.1_1_X:151996387-151997293:-|nuORF	30.503639358989545	0.3235605894931338	4				NaN	NaN	0	NaN	4352	2735	7083
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7090	21.395	NaN	11091	30	0	2101.1	0.14			+	-1	ETFCVLQL	8	71	505.255978236508	1008.497403539816	2	505.2566223144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_ETFC(Carbamidomethyl (C))VLQL_	REV__EFCAB7|p.F431Lfs*3|2|0.41|ENSG00000203965|chr1:63557186-63557186|T/-|frameshift_variant;REV__ENSG00000203965|ENST00000371088|EFCAB7;REV__ENST00000496956.1_1_1:63999833-64017523:+|nuORF;REV__nc|ENSG00000203965|A8K855-2|EFCAB7	57.81127852772723	0.5234495074909924	4				NaN	NaN	0	NaN	4353	2735	7083
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7108	21.434	NaN	14413	30	0	4504.3	0.214				-1	 	0	70	342.8569074395382	1025.5488929188145	3	342.8573913574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4368	2738	7107
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7109	21.438	NaN	23359	30	0	6888.7	0.106	+			7631	DKILLFTTT	9	78	351.20590417688027	1050.5958831308408	3	351.20635986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DKILLFTTT_	COL21A1|p.E790Dfs*24|1|0.04|ENSG00000124749|chr6:56060778-56060779|-/AGAGGATATAAGTGAGGTGAAGAAGAAAACAGATAACA|frameshift_variant;COL21A1|p.G902Mfs*52|1|0.44|ENSG00000124749|chr6:56057828-56057829|-/GGAGGGCCCTCTGGACCTAAGATGGGACATT|frameshift_variant;COL21A1|p.K712Rfs*48|1|0.1|ENSG00000124749|chr6:56064615-56064615|T/-|frameshift_variant;ENSG00000124749|ENST00000244728|COL21A1;nc|ENSG00000124749|Q96P44-3|COL21A1	27.882242232435846	0.5426732730940306	4				NaN	NaN	0	NaN	4369	2738	7107
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7110	21.44	NaN	7572.3	30	0	1056	0.106	+			46277	VEHKVETF	8	70	494.7583479033755	987.5021428735511	2	494.75836181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VEHKVETF_	ENSG00000171863|ENST00000645674|RPS7;ENST00000444127.1_1_1:68708159-68708657:-|nuORF;ENST00000484240.1_1_17:44798950-44799232:-|nuORF	79.71258880314673	0.32596852995588826	4				NaN	NaN	0	NaN	4370	2738	7107
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7111	21.441	NaN	18553	30	0	1924.8	0.106	+			23019	KVSQVIMEK	9	84	531.3039407535334	1060.5933285738668	2	531.3049926757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KVSQVIMEK_	ENSG00000164985|ENST00000380733|PSIP1	145.46060221211434	0.007927189773590037	4				NaN	NaN	0	NaN	4371	2738	7107
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7112	21.443	NaN	22229	30	0	6467.5	0.106	+			16305	HEHQANLL	8	69	481.2455799672458	960.4766070012917	2	481.24591064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HEHQANLL_	ENSG00000116560|ENST00000357214|SFPQ;nc|ENSG00000116560|P23246-2|SFPQ;SFPQ|p.R536C|1|0.22|ENSG00000116560|chr1:35189192-35189192|G/A|missense_variant	82.24051045832904	0.30490469762271794	4				NaN	NaN	0	NaN	4372	2738	7107
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7113	21.445	NaN	16697	30	0	1498.6	0.036	+			16248	HEEKVFRAV	9	78	557.8036764277134	1113.5927999222267	2	557.8040771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HEEKVFRAV_	ENSG00000095139|ENST00000264028|ARCN1;nc|ENSG00000095139|P48444-2|ARCN1	163.1509380574825	0.003936019289634439	4				NaN	NaN	0	NaN	4373	2738	7107
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7114	21.446	NaN	15224	30	0	4931.6	0.145	+			34657	RVRDVFEAK	9	90	373.8798444285351	1118.6177038858052	3	373.8802185058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RVRDVFEAK_	ENSG00000178035|ENST00000326739|IMPDH2;ENST00000491610.1_1_3:49064384-49065376:-|nuORF	65.46538089061403	0.16805504838372562	4				NaN	NaN	0	NaN	4374	2738	7107
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7132	21.485	NaN	20600	30	0	4174.3	0.214	+			38169	SQCDSPYVTK	10	88	592.7654698362853	1183.5163867393705	2	592.7664794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SQC(Carbamidomethyl (C))DSPYVTK_	ENSG00000102572|ENST00000539966|STK24;ENST00000481288.1_1_13:99161185-99171658:-|nuORF;nc|ENSG00000102572|Q9Y6E0|STK24	181.87364410229196	0.0010491195229426484	4				NaN	NaN	0	NaN	4389	2741	7131
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7133	21.489	NaN	30576	30	0	8867	0.106			+	44451	TSNIIAKAG	9	85	437.7524667491399	873.4903805650798	2	437.75262451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TSNIIAKAG_	REV__ENSG00000051128|ENST00000392351|HOMER3;REV__nc|ENSG00000051128|Q9NSC5-2|HOMER3;REV__nc|ENSG00000051128|Q9NSC5-3|HOMER3;REV__nc|ENSG00000051128|Q9NSC5-4|HOMER3;REV__nc|ENSG00000051128|Q9NSC5-5|HOMER3	87.75429964447693	0.0711966946989736	4				NaN	NaN	0	NaN	4390	2741	7131
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7134	21.491	NaN	6650.1	30	0	547.6	0.106				-1	ACLSFWYHMY	10	73	689.291152040325	1376.5677511474498	2	689.2926025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_AC(Carbamidomethyl (C))LSFWYHMY_	ENSG00000154646|ENST00000284885|TMPRSS15;TMPRSS15|p.K775Nfs*58|1|0.41|ENSG00000154646|chr21:18294431-18294431|T/-|frameshift_variant;TMPRSS15|p.L776Tfs*15|1|0.21|ENSG00000154646|chr21:18294430-18294431|-/T|frameshift_variant;TMPRSS15|p.N484Tfs*4|1|0.28|ENSG00000154646|chr21:18341526-18341526|T/-|frameshift_variant;TMPRSS15|p.P420S|1|0.07|ENSG00000154646|chr21:18343974-18343974|G/A|missense_variant	57.81127852772723	0.38574637483653407	4				NaN	NaN	0	NaN	4391	2741	7131
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7135	21.493	NaN	38919	30	0	13182	0.106				-1	 	0	85	411.7209171112693	821.4272812893386	2	411.721435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4392	2741	7131
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7136	21.494	NaN	9160.8	30	0	2685.7	0.106			+	32191	QSTRDYEE	8	75	514.2203054829151	1026.4260580326302	2	514.2205810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QSTRDYEE_	REV__ACE|p.P1103Qfs*69|1|0.14|ENSG00000159640|chr17:63494393-63494393|C/-|frameshift_variant;REV__ACE|p.S903Rfs*9|1|0.07|ENSG00000159640|chr17:63491014-63491014|C/-|frameshift_variant;REV__ENSG00000159640|ENST00000290866|ACE;REV__ENST00000578839.5_1_17:61562212-61574724:+|nuORF;REV__ENST00000579726.5_2_17:61562598-61563979:+|nuORF;REV__ENST00000582678.5_1_17:61557143-61562826:+|nuORF;REV__nc|ENSG00000159640|P12821-2|ACE;REV__nc|ENSG00000159640|P12821-3|ACE;REV__nc|ENSG00000159640|P12821-4|ACE	68.78682469695295	0.41700713582915416	4				NaN	NaN	0	NaN	4393	2741	7131
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7137	21.496	NaN	13776	30	0	7932.6	0.037				-1	FEMGMKITAM	10	75	587.7690170056541	1173.523481078108	2	587.769775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_FEMGMKITAM(Oxidation (M))_	ENSG00000218823|ENST00000404991|PAPOLB	33.921630207806714	0.6028135429846169	4				NaN	NaN	0	NaN	4394	2741	7131
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7138	21.497	NaN	12815	30	0	2172.3	0.141	+			44340	TSGPTTPLK	9	87	451.251970498154	900.489388063108	2	451.2529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TSGPTTPLK_	ENSG00000188112|ENST00000341865|C6orf132	98.62937762414208	0.04060045538121712	4				NaN	NaN	0	NaN	4395	2741	7131
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7156	21.536	NaN	294180	30	0	61122	0.151	+			48410	VTIKEGSQLK	10	100	551.8261070796984	1101.6376612261968	2	551.8270874023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTIKEGSQLK_	ENSG00000100138|ENST00000401959|SNU13	180.09051358498644	0.001227893244234508	4				NaN	NaN	0	NaN	4410	2744	7155
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7157	21.539	NaN	61612	30	0	12405	0.106	+			4127	ATEHLSTLSEK	11	88	608.3140842472449	1214.6136155612896	2	608.3145141601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATEHLSTLSEK_	ENSG00000118137|ENST00000236850|APOA1	171.33049012695201	2.4609825723217833E-05	4				NaN	NaN	0	NaN	4411	2744	7155
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7158	21.541	NaN	14433	30	0	2776.5	0.106				-1	 	0	80	582.2800186420835	1162.545484350967	2	582.2808837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4412	2744	7155
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7159	21.543	NaN	33089	30	0	4963.9	0.106	+			40398	STVEKIAMK	9	93	503.7864258452199	NaN	0	503.7845458984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STVEKIAMK_	ENSG00000129657|ENST00000436233|SEC14L1;nc|ENSG00000129657|Q92503-2|SEC14L1;nc|ENSG00000129657|Q92503-3|SEC14L1;SEC14L1|p.G159Efs*12|1|0.17|ENSG00000129657|chr17:77193544-77193544|A/-|frameshift_variant	114.8945686534367	0.005276929498059453	4				NaN	NaN	0	NaN	4413	2744	7155
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7160	21.544	NaN	17539	30	0	12217	0.106	+			35345	SAPEARTL	8	64	422.72922020129926	843.4438874693985	2	422.72967529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SAPEARTL_	ENSG00000014914|ENST00000439741|MTMR11;ENST00000490310.1_1_1:149903106-149903271:-|nuORF;nc|ENSG00000014914|A4FU01-4|MTMR11	65.46538089061403	0.44767499471257033	4				NaN	NaN	0	NaN	4414	2744	7155
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7161	21.546	NaN	8179.7	30	0	1035.3	0.106				-1	 	0	70	507.30256453815207	1012.5905761431042	2	507.3031921386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4415	2744	7155
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7162	21.548	NaN	8703.5	30	0	1064.4	0.037	+			20063	KEKEPEEEL	9	74	565.7820441830605	1129.549535432921	2	565.7827758789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KEKEPEEEL_	ENSG00000149781|ENST00000345728|FERMT3;FERMT3|p.R510Pfs*105|1|0.28|ENSG00000149781|chr11:64220634-64220635|-/C|frameshift_variant;nc|ENSG00000149781|Q86UX7|FERMT3	117.81106730687013	0.02252488733980868	4				NaN	NaN	0	NaN	4416	2744	7155
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7180	21.586	NaN	77745	30	0	14060	0.17				-1	 	0	94	481.79714454904985	961.5797361648997	2	481.7974853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4431	2747	7179
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7181	21.589	NaN	81712	30	0	10437	0.106			+	7397	DEEVLADQY	9	79	541.2378306318782	1080.4611083305563	2	541.2388916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DEEVLADQY_	REV__ENSG00000162105|ENST00000601538|SHANK2;REV__nc|ENSG00000162105|Q9UPX8-1|SHANK2;REV__nc|ENSG00000162105|Q9UPX8-4|SHANK2	63.30626980617807	0.18605348971131092	4				NaN	NaN	0	NaN	4432	2747	7179
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7182	21.591	NaN	20408	30	0	6047.2	0.106				-1	 	0	82	397.7236783341956	793.4328037351912	2	397.7239990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4433	2747	7179
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7183	21.592	NaN	21998	30	0	4295.7	0.106			+	35040	SADLESSKR	9	76	496.75431186113417	991.4940707890684	2	496.75531005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SADLESSKR_	REV__ENSG00000075413|ENST00000429436|MARK3;REV__ENST00000558953.1_1_14:103932392-103935580:+|nuORF;REV__MARK3|p.A425Sfs*19|1|0.22|ENSG00000075413|chr14:103474997-103474998|-/C|frameshift_variant;REV__nc|ENSG00000075413|P27448-2|MARK3;REV__nc|ENSG00000075413|P27448-3|MARK3;REV__nc|ENSG00000075413|P27448-4|MARK3;REV__nc|ENSG00000075413|P27448-8|MARK3	51.19269402634007	0.2889735674168909	4				NaN	NaN	0	NaN	4434	2747	7179
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7184	21.594	NaN	15863	30	0	1553.4	0.106				-1	 	0	80	416.21345995922303	830.4123669852461	2	416.2138366699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4435	2747	7179
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7185	21.596	NaN	27854	30	0	5115.6	0.106	+			26337	LSYAWEPRC	9	78	562.7648900679741	NaN	0	562.764892578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSYAWEPRC_	RASGRP4|p.R429W|1|0.22|ENSG00000171777|chr19:38413420-38413420|G/A|missense_variant	94.00642277110589	0.0335199496031268	4				NaN	NaN	0	NaN	4436	2747	7179
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7186	21.598	NaN	4120.7	30	0	2111.6	0.041				-1	YLHQEMQNSKE	11	60	711.8197457592828	1421.6249385853655	2	711.82177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_YLHQEM(Oxidation (M))QNSKE_	ENSG00000121446|ENST00000294854|RGSL1;nc|ENSG00000121446|A5PLK6-2|RGSL1;nc|ENSG00000121446|A5PLK6-3|RGSL1;nc|ENSG00000121446|A5PLK6-4|RGSL1;nc|ENSG00000121446|A5PLK6-5|RGSL1	27.047317107675042	0.7060868989289394	4				NaN	NaN	0	NaN	4437	2747	7179
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7204	21.636	NaN	43100	30	0	7835.1	0.214	+			4897	ATQGATEIVK	10	85	509.2818916204951	1016.5492303077903	2	509.2823791503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATQGATEIVK_	ENSG00000104321|ENST00000262209|TRPA1;TRPA1|p.G505Rfs*7|1|0.38|ENSG00000104321|chr8:72055452-72055453|-/T|frameshift_variant;TRPA1|p.L1023Ffs*15|1|0.42|ENSG00000104321|chr8:72023894-72023895|-/A|frameshift_variant;TRPA1|p.N377Ifs*25|1|0.08|ENSG00000104321|chr8:72056981-72056982|-/AAACTAATTTTGTTTATTA|frameshift_variant;TRPA1|p.T673Hfs*23|1|0.45|ENSG00000104321|chr8:72046557-72046557|T/-|frameshift_variant;TRPA1|p.Y327*|1|0.36|ENSG00000104321|chr8:72059399-72059402|TAAA/-|frameshift_variant	219.71546104229412	3.1987213481512477E-10	4				NaN	NaN	0	NaN	4452	2750	7203
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7205	21.639	NaN	28753	30	0	12247	0.106				-1	 	0	57	323.2010544127796	644.3875558923593	2	323.2013854980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4453	2750	7203
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7206	21.641	NaN	32427	30	0	2981.3	0.106	+			33171	RETVIKQTM	9	94	553.304799956696	1104.595046980192	2	553.3056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RETVIKQTM_	ENSG00000198498|ENST00000358572|TMA16;ENST00000508652.5_1_4:164415907-164436651:+|nuORF	96.66504779109242	0.04607440320619715	4				NaN	NaN	0	NaN	4454	2750	7203
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7207	21.643	NaN	24795	30	0	2605.4	0.106	+			3364	ASNPATFQR	9	85	496.25119095249073	NaN	0	496.2512512207031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASNPATFQR_	nc|ENSG00000286140|P0CG12|DERPC	61.76455937419982	0.141793055474112	4				NaN	NaN	0	NaN	4455	2750	7203
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7208	21.645	NaN	15435	30	0	5276.6	0.106	+			1815	AIFQGKLEKK	10	71	387.9045413712907	1160.691794714072	3	387.9045104980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AIFQGKLEKK_	ENSG00000118322|ENST00000327245|ATP10B	41.080066990542036	0.5391928043837881	4				NaN	NaN	0	NaN	4456	2750	7203
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7209	21.647	NaN	23260	30	0	15695	0.034	+			35379	SAPTETHSL	9	70	471.7294877454774	941.4444225577548	2	471.72979736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SAPTETHSL_	ENSG00000184451|ENST00000332438|CCR10	82.24051045832904	0.08786059719216216	4				NaN	NaN	0	NaN	4457	2750	7203
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7210	21.647	NaN	36696	30	0	6865.4	0.143	+			49237	VVNKVPLTGK	10	95	352.22505652344034	1053.653340170521	3	352.22540283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VVNKVPLTGK_	ENSG00000151135|ENST00000280756|TMEM263	37.50817390946774	0.5721060100277453	4				NaN	NaN	0	NaN	4458	2750	7203
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7228	21.685	NaN	58233	30	0	15156	0.214			+	26175	LSRFVQRVL	9	104	373.23274535756343	1116.6764066728904	3	373.2328796386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSRFVQRVL_	REV__ENST00000593183.2_1_19:16013215-16014022:-|nuORF	35.61828744233558	0.47037581924408073	4				NaN	NaN	0	NaN	4473	2753	7227
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7229	21.689	NaN	10738	30	0	2174.3	0.106	+			5110	ATSPLHINK	9	89	490.77930575136656	979.5440585695331	2	490.779541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATSPLHINK_	ENSG00000089177|ENST00000354981|KIF16B;nc|ENSG00000089177|Q96L93-4|KIF16B;nc|ENSG00000089177|Q96L93-5|KIF16B;nc|ENSG00000089177|Q96L93-6|KIF16B	85.16082228582465	0.07850854922700509	4				NaN	NaN	0	NaN	4474	2753	7227
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7230	21.691	NaN	4506.7	30	0	775.36	0.106				-1	KTMRMRLC	8	71	548.2842635895489	1094.5539742458977	2	548.2850341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_KTMRMRLC(Carbamidomethyl (C))_	ENSG00000104067|ENST00000614355|TJP1;nc|ENSG00000104067|Q07157-2|TJP1;nc|ENSG00000104067|Q07157|TJP1	45.9519527083369	0.6193794311207887	4				NaN	NaN	0	NaN	4475	2753	7227
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7231	21.693	NaN	8221.5	30	0	4165.3	0.106			+	31812	QPPRSGGL	8	56	406.2233812917745	810.432209650349	2	406.2245788574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QPPRSGGL_	REV__ENST00000526463.5_1_11:118881994-118885721:+|nuORF;REV__ENST00000532132.5_1_11:118881994-118886068:+|nuORF;REV__ENST00000580556.5_1_11:118881994-118885036:+|nuORF;REV__ENST00000583842.1_1_11:118881994-118882714:+|nuORF	49.44154591367651	0.597725784090933	4				NaN	NaN	0	NaN	4476	2753	7227
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7232	21.694	NaN	6701.5	30	0	1682.7	0.106	+			45206	TVNPVAIHK	9	62	326.8620954814162	977.5644570444485	3	326.8624572753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TVNPVAIHK_	ENSG00000074047|ENST00000361492|GLI2;ENST00000438299.5_1_2:121728002-121748192:+|nuORF;ENST00000452692.5_1_2:121728002-121748192:+|nuORF;GLI2|p.R1387Lfs*143|1|0.1|ENSG00000074047|chr2:120990074-120990074|G/-|frameshift_variant;nc|ENSG00000074047|P10070-1|GLI2;nc|ENSG00000074047|P10070-2|GLI2;nc|ENSG00000074047|P10070-3|GLI2;nc|ENSG00000074047|P10070-4|GLI2;nc|ENSG00000074047|P10070|GLI2	65.46538089061403	0.16805504838372562	4				NaN	NaN	0	NaN	4477	2753	7227
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7233	21.696	NaN	10947	30	0	1714.2	0.035			+	44426	TSLSRTSKK	9	71	504.29453388131145	1006.5745148294229	2	504.2965393066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TSLSRTSKK_	REV__ENSG00000133401|ENST00000438447|PDZD2;REV__ENST00000502489.5_1_5:31983264-32077762:+|nuORF;REV__nc|ENSG00000133401|O15018-2|PDZD2;REV__PDZD2|p.D2774Rfs*7|1|0.29|ENSG00000133401|chr5:32101201-32101202|-/G|frameshift_variant;REV__PDZD2|p.E2629Kfs*37|1|0.23|ENSG00000133401|chr5:32097314-32097314|A/-|frameshift_variant;REV__PDZD2|p.G594Afs*45|1|0.09|ENSG00000133401|chr5:32052720-32052720|A/-|frameshift_variant;REV__PDZD2|p.K1843Rfs*31|3|0.26|ENSG00000133401|chr5:32088970-32088970|A/-|frameshift_variant;REV__PDZD2|p.Q1108Sfs*17|1|0.35|ENSG00000133401|chr5:32074423-32074423|C/-|frameshift_variant;REV__PDZD2|p.S2770Gfs*12|1|0.04|ENSG00000133401|chr5:32101193-32101194|-/GGGT|frameshift_variant;REV__PDZD2|p.V1845Rfs*6|2|0.38|ENSG00000133401|chr5:32088969-32088970|-/A|frameshift_variant	66.42927471994793	0.16001998865088202	4				NaN	NaN	0	NaN	4478	2753	7227
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7234	21.697	NaN	12079	30	0	4976.4	0.144	+			23109	KVVKVTIMK	9	76	349.2310736761094	1044.6713916285282	3	349.2315368652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KVVKVTIMK_	ENSG00000139168|ENST00000266529|ZCRB1;ZCRB1|p.K141Efs*4|1|0.29|ENSG00000139168|chr12:42313900-42313901|-/T|frameshift_variant;ZCRB1|p.W185Mfs*13|2|0.39|ENSG00000139168|chr12:42313168-42313169|-/T|frameshift_variant	72.2432373244024	0.13108886737667413	4				NaN	NaN	0	NaN	4479	2753	7227
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7252	21.736	NaN	56632	30	0	19612	0.214	+			38197	SQFLAPKAMKK	11	92	416.9086871196546	1247.7042319591637	3	416.9097900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SQFLAPKAMKK_	ENSG00000214530|ENST00000334805|STARD10;ENST00000535075.1_1_11:72465944-72466832:-|nuORF;ENST00000543089.1_1_11:72465944-72468974:-|nuORF	72.09557110113691	0.21826960075221502	4				NaN	NaN	0	NaN	4494	2756	7251
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7253	21.739	NaN	8021.8	30	0	4021	0.106			+	-1	ATLLLCLLA	9	47	329.86932806834216	986.5861548052264	3	329.8700256347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_ATLLLC(Carbamidomethyl (C))LLA_	REV__ENSG00000108688|ENST00000378569|CCL7	26.69291269510374	0.5537881896960711	4				NaN	NaN	0	NaN	4495	2756	7251
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7254	21.741	NaN	11561	30	0	1930.5	0.106			+	26936	LYGDYHAN	8	73	476.7111551233726	951.4077573135452	2	476.71209716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LYGDYHAN_	REV__ENSG00000079150|ENST00000424785|FKBP7;REV__ENST00000464248.1_1_2:179330632-179343265:-|nuORF;REV__ENST00000470945.1_1_2:179330657-179343310:-|nuORF;REV__nc|ENSG00000079150|Q9Y680-1|FKBP7;REV__nc|ENSG00000079150|Q9Y680-3|FKBP7	38.80614096846853	0.6637206697844082	4				NaN	NaN	0	NaN	4496	2756	7251
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7255	21.743	NaN	8724.7	30	0	655.85	0.106			+	47765	VSGSLGKKVP	10	85	486.297911763065	970.58127059293	2	486.298583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSGSLGKKVP_	REV__tr|U7T4M0|U7T4M0_FUSNUCobW/HypB/UreGnucleotide-bindingdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00363PE=4SV=1	46.45678178249821	0.4896490706773647	4				NaN	NaN	0	NaN	4497	2756	7251
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7256	21.745	NaN	6304.6	30	0	932.01	0.106			+	10986	FEFPSDFH	8	72	513.2227591420199	NaN	0	513.2227172851562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FEFPSDFH_	REV__ENSG00000105993|ENST00000262177|DNAJB6;REV__ENST00000485817.1_1_3:125063303-125063474:-|nuORF;REV__ENST00000488001.5_1_7:157151266-157161444:+|nuORF;REV__ENST00000526843.2_1_11:127810983-127811547:-|nuORF;REV__nc|ENSG00000105993|O75190-2|DNAJB6;REV__nc|ENSG00000105993|O75190-3|DNAJB6;REV__nc|ENSG00000105993|O75190-4|DNAJB6	42.47446043378293	1.7418937515398478	4				NaN	NaN	0	NaN	4498	2756	7251
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7257	21.747	NaN	18857	30	0	10301	0.036				-1	 	0	68	357.2043331878024	1068.591170163607	3	357.2052307128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4499	2756	7251
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7258	21.747	NaN	9797.9	30	0	1673.7	0.138			+	48017	VSQVSSHL	8	65	428.72988398292074	855.4452150326415	2	428.73028564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VSQVSSHL_	REV__nc|ENSG802|Q902F9|HERVK_113_env;REV__nc|ENSG811|Q9UKH3|ERVK-9_env;REV__nc|ENSG815|Q902F8|ERVK-8_env;REV__nc|ENSG819|P61567|ERVK-7_env;REV__nc|ENSG821|P63135|ERVK-7_pol;REV__nc|ENSG825|Q69384|ERVK-6_env;REV__nc|ENSG833|P61570|ERVK-25_env;REV__nc|ENSG836|P61566|ERVK-24_env;REV__nc|ENSG845|O71037|ERVK-19_env;REV__nc|ENSG849|O42043|ERVK-18_env	60.97194046774394	0.49215940876911696	4				NaN	NaN	0	NaN	4500	2756	7251
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7276	21.786	NaN	13813	30	0	2417.2	0.214	+			36882	SIGNLTQLQ	9	87	487.2689727954482	972.5233926576964	2	487.2692565917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIGNLTQLQ_	ENSG00000148356|ENST00000300417|LRSAM1;nc|ENSG00000148356|Q6UWE0-2|LRSAM1	87.69643885390035	0.07135982304947239	4				NaN	NaN	0	NaN	4515	2759	7275
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7277	21.79	NaN	35459	30	0	5196.9	0.106	+			17690	IEKVEHSDL	9	88	535.2789515479311	1068.5433501626621	2	535.2802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IEKVEHSDL_	B2M|p.Y98Lfs*5|1|0.08|ENSG00000166710|chr15:44715648-44715648|A/-|frameshift_variant;ENSG00000166710|ENST00000648006|B2M;ENST00000559720.5_1_15:45003705-45007919:+|nuORF	155.5846463517096	0.005567437401040498	4				NaN	NaN	0	NaN	4516	2759	7275
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7278	21.792	NaN	9349.4	30	0	1649.2	0.106	+			46398	VEMHHEAL	8	75	483.2284714456339	964.4423899580678	2	483.22882080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VEMHHEAL_	ENSG00000101210|ENST00000217182|EEF1A2;ENSG00000156508|ENST00000309268|EEF1A1;ENST00000395772.3_1_X:97645409-97645481:+|nuORF;ENST00000436459.2_1_9:135895553-135896258:+|nuORF;ENST00000447052.1_1_21:24762753-24763314:+|nuORF;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	63.30626980617807	0.4690498839812213	4				NaN	NaN	0	NaN	4517	2759	7275
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7279	21.794	NaN	7659.9	30	0	3298.7	0.106			+	26005	LSKQVSKKG	9	60	325.5375528128589	973.5908290387767	3	325.5378723144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSKQVSKKG_	REV__CDCA2|p.N847Mfs*14|1|0.15|ENSG00000184661|chr8:25507200-25507200|A/-|frameshift_variant;REV__ENSG00000184661|ENST00000330560|CDCA2	49.536043120802724	0.308405419312776	4				NaN	NaN	0	NaN	4518	2759	7275
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7280	21.795	NaN	14971	30	0	1289.6	0.106	+			8905	EEVAQQKSL	9	91	516.271166701841	1030.527780470482	2	516.2720947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EEVAQQKSL_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	185.71840793949184	0.0007219834064317508	4				NaN	NaN	0	NaN	4519	2759	7275
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7281	21.797	NaN	56307	30	0	33623	0.038	+			21187	KLASSIAFTYN	11	88	405.5520391815112	1213.6342881447335	3	405.5524597167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KLASSIAFTYN_	ENSG00000172915|ENST00000379939|NBEA;ENST00000497540.1_1_13:35644101-35644990:+|nuORF;NBEA|p.N1121Kfs*2|1|0.35|ENSG00000172915|chr13:35159525-35159526|-/A|frameshift_variant;NBEA|p.N1121Mfs*9|2|0.36|ENSG00000172915|chr13:35159526-35159526|A/-|frameshift_variant;NBEA|p.N718Kfs*4|1|0.12|ENSG00000172915|chr13:35118380-35118381|-/A|frameshift_variant;NBEA|p.N854Kfs*18|1|0.22|ENSG00000172915|chr13:35156110-35156111|-/A|frameshift_variant;NBEA|p.V2250Lfs*10|1|0.36|ENSG00000172915|chr13:35550967-35550967|A/-|frameshift_variant;nc|ENSG00000172915|Q8NFP9|NBEA	30.568863376406313	0.6691487505135859	4				NaN	NaN	0	NaN	4520	2759	7275
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7282	21.798	NaN	12618	30	0	4908	0.137				-1	 	0	73	384.7719980002254	767.5294430672508	2	384.7721252441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4521	2759	7275
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7300	21.836	NaN	1481900	30	0	203960	0.047	+			6203	AVQRTLLEK	9	94	529.3208797093913	1056.6272064855825	2	529.3230590820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVQRTLLEK_	ENSG00000002586|ENST00000381192|CD99;ENST00000381177.6_1_X:2656215-2658842:+|nuORF;nc|ENSG00000292348|P14209-3|CD99	104.42354056486148	0.0346881550498418	4				NaN	NaN	0	NaN	4536	2762	7299
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7301	21.837	NaN	1131200	30	0	220950	0.106				-1	 	0	82	453.255526716997	904.496500500794	2	453.25592041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4537	2762	7299
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7302	21.838	NaN	12488	30	0	2468.1	0.106			+	9169	EGPLRSPK	8	79	442.2533231435116	882.4920933538232	2	443.2102355957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EGPLRSPK_	REV__sp|P09695|TRS1_HCMVAProteinHHLF1OS=Humancytomegalovirus(strainAD169)OX=10360GN=TRS1PE=1SV=1	27.882242232435846	0.7440473649773525	4				NaN	NaN	0	NaN	4538	2762	7299
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7303	21.84	NaN	36678	30	0	18304	0.106			+	45787	VAGLALSGLRT	11	73	353.21647094707896	1056.6275834414369	3	353.2168884277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VAGLALSGLRT_	REV__nc|ENSG00000267493|Q8TBR5|CIRBP-AS1	39.252832667884924	0.5681665794958463	4				NaN	NaN	0	NaN	4539	2762	7299
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7304	21.842	NaN	5261.6	30	0	724	0.106	+			27401	MKRKLCGKG	9	66	510.79471119596906	1019.5748694587381	2	510.7955322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MKRKLCGKG_	ENST00000485230.5_2_3:112970233-112970398:+|nuORF	58.78195531508484	0.22376836668196862	4				NaN	NaN	0	NaN	4540	2762	7299
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7305	21.844	NaN	11387	30	0	1840.7	0.106	+			21305	KLSQDDQTT	9	73	518.2508324624283	1034.4871119916565	2	518.2520141601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KLSQDDQTT_	ENSG00000120051|ENST00000369704|CFAP58	84.9155231211612	0.07920012719736333	4				NaN	NaN	0	NaN	4541	2762	7299
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7306	21.846	NaN	6493.6	30	0	1363.4	0.106	+			45052	TVGQSSLKP	9	60	458.75786635775586	915.5011797823117	2	458.75830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TVGQSSLKP_	CCSER1|p.R822Q|1|0.22|ENSG00000184305|chr4:91598819-91598819|G/A|missense_variant;ENSG00000184305|ENST00000509176|CCSER1	58.22992032128504	0.22837015374068087	4				NaN	NaN	0	NaN	4542	2762	7299
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7307	21.848	NaN	5158.1	30	0	1148.4	0.034	+			12012	FWAREVGP	8	66	481.2499590819506	960.4853652307012	2	481.2508544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_FWAREVGP_	ENST00000392263.6_2_2:202098244-202098831:+|nuORF	33.51558372728122	0.7005509609380386	4				NaN	NaN	0	NaN	4543	2762	7299
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7325	21.884	NaN	61655	30	0	7721.8	0.211	+			7121	DAAKNQVAM	9	103	474.23364938807146	946.4527458429429	2	474.234130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DAAKNQVAM_	ENSG00000109971|ENST00000534624|HSPA8;ENSG00000126803|ENST00000247207|HSPA2;ENSG00000204390|ENST00000375654|HSPA1L;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000531063.1_1_11:122931759-122932032:-|nuORF;ENST00000532167.5_1_11:122930938-122932032:-|nuORF;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;ENST00000533238.5_1_11:122929516-122932032:-|nuORF;HSPA2|p.G138Afs*8|3|0.33|ENSG00000126803|chr14:64541257-64541257|G/-|frameshift_variant;HSPA8|p.K569Dfs*6|1|0.3|ENSG00000109971|chr11:123058302-123058303|TC/-|frameshift_variant;nc|ENSG00000109971|P11142-2|HSPA8	139.97047562133406	0.010493916756945389	4				NaN	NaN	0	NaN	4558	2765	7324
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7326	21.887	NaN	88820	30	0	14561	0.106	+			41829	SVSTHLITK	9	111	493.2870828091629	984.5596126851258	2	493.2873229980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVSTHLITK_	ENSG00000177873|ENST00000432264|ZNF619;ENST00000494154.6_1_3:40523704-40529729:+|nuORF;nc|ENSG00000177873|Q8N2I2-2|ZNF619;nc|ENSG00000177873|Q8N2I2-4|ZNF619;nc|ENSG00000177873|Q8N2I2|ZNF619	146.78539889680295	0.007618400906539062	4				NaN	NaN	0	NaN	4559	2765	7324
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7327	21.889	NaN	40848	30	0	3604.1	0.106			+	48660	VTSSKRLLQ	9	102	516.3135582526577	1030.6125635721153	2	516.314208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTSSKRLLQ_	REV__ENSG00000176771|ENST00000409261|NCKAP5	81.52500206392136	0.09095445986635249	4				NaN	NaN	0	NaN	4560	2765	7324
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7328	21.891	NaN	13426	30	0	2995.8	0.106	+			25157	LLSVGRQD	8	87	444.25027035954787	886.4859877858958	2	444.250732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LLSVGRQD_	ENST00000541763.6_1_12:109994935-109999613:-|nuORF	54.776311868738084	0.5534952410049249	4				NaN	NaN	0	NaN	4561	2765	7324
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7329	21.893	NaN	34191	30	0	11338	0.106	+			39157	SSVRTKLIQ	9	89	344.54451435348693	1030.6117136606608	3	344.545166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSVRTKLIQ_	ENSG00000142207|ENST00000382751|URB1	63.53385203322761	0.18415635464017938	4				NaN	NaN	0	NaN	4562	2765	7324
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7330	21.895	NaN	17821	30	0	7160.2	0.035	+			38333	SRHKSHDN	8	81	490.7374296080844	979.4603062829689	2	490.7378234863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SRHKSHDN_	ENSG00000144824|ENST00000431670|PHLDB2;nc|ENSG00000144824|Q86SQ0-2|PHLDB2;nc|ENSG00000144824|Q86SQ0-3|PHLDB2;PHLDB2|p.K1064Nfs*28|1|0.29|ENSG00000144824|chr3:111967696-111967696|A/-|frameshift_variant;PHLDB2|p.K665Rfs*6|1|0.22|ENSG00000144824|chr3:111920409-111920409|A/-|frameshift_variant;PHLDB2|p.P552Hfs*18|1|0.06|ENSG00000144824|chr3:111913637-111913638|-/AT|frameshift_variant;PHLDB2|p.S734Ifs*5|1|0.07|ENSG00000144824|chr3:111939544-111939545|-/TAACT|frameshift_variant;PHLDB2|p.V822Lfs*6|1|0.1|ENSG00000144824|chr3:111945316-111945316|G/-|frameshift_variant	37.15910966729921	0.6739408393984688	4				NaN	NaN	0	NaN	4563	2765	7324
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7331	21.895	NaN	9790.4	30	0	1837	0.138			+	43394	TGGMGIPKN	9	71	437.72559180919137	873.4366306851828	2	437.72576904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TGGMGIPKN_	REV__ENSG00000182919|ENST00000354421|C11orf54;REV__nc|nan|Q9H0W9-2|C11orf54;REV__nc|nan|Q9H0W9-4|C11orf54	58.78195531508484	0.22376836668196862	4				NaN	NaN	0	NaN	4564	2765	7324
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7349	21.933	NaN	97591	30	0	10253	0.197	+			4407	ATIDGSVNPK	10	124	501.2662547378668	1000.5179565425336	2	501.26654052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATIDGSVNPK_	ENSG00000116830|ENST00000369466|TTF2;ENST00000463696.1_1_1:117637951-117640053:+|nuORF;ENST00000492682.5_1_1:117635418-117640830:+|nuORF;TTF2|p.K1134Efs*22|1|0.25|ENSG00000116830|chr1:117101426-117101427|-/A|frameshift_variant	145.46060221211434	0.009301538339246195	4				NaN	NaN	0	NaN	4579	2768	7348
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7350	21.936	NaN	30597	30	0	2909.2	0.106	+			16177	HEALKENGVT	10	107	549.2824455908589	1096.5503382485176	2	549.2831420898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HEALKENGVT_	ENSG00000108828|ENST00000355653|VAT1;nc|ENSG00000108828|Q99536-2|VAT1;nc|ENSG00000108828|Q99536-3|VAT1	143.37361013837676	0.009854612225601756	4				NaN	NaN	0	NaN	4580	2768	7348
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7351	21.938	NaN	20391	30	0	2486.2	0.106				-1	 	0	86	517.2667212286221	1032.5188895240442	2	517.2673950195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4581	2768	7348
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7352	21.94	NaN	12681	30	0	1862.4	0.106				-1	 	0	70	364.7378007739755	727.461048614751	2	364.7381591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4582	2768	7348
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7353	21.942	NaN	9301.2	30	0	846.03	0.106			+	31687	QNKVIENFI	9	85	552.8060273696066	NaN	0	552.8074951171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QNKVIENFI_	REV__ITGB6|p.R222I|1|0.37|ENSG00000115221|chr2:160174068-160174068|C/A|missense_variant	70.8162118820467	0.10318768208603292	4				NaN	NaN	0	NaN	4583	2768	7348
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7354	21.943	NaN	12339	30	0	938.51	0.106	+			31701	QNNANGNLIQ	10	80	543.2712904700359	1084.5280280068716	2	543.2724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QNNANGNLIQ_	ENSG00000185842|ENST00000682510|DNAH14;nc|ENSG00000185842|Q0VDD8-4|DNAH14;nc|ENSG00000185842|Q0VDD8|DNAH14	58.78195531508484	0.37691818691852547	4				NaN	NaN	0	NaN	4584	2768	7348
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7355	21.945	NaN	21790	30	0	3529.7	0.037				-1	ADCLLFSFL	9	80	362.51667681626134	1084.528201048984	3	362.5172424316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_ADC(Carbamidomethyl (C))LLFSFL_	UTP20|p.R2433C|1|0.21|ENSG00000120800|chr12:101375657-101375657|C/T|missense_variant	39.252832667884924	0.4290233611298554	4				NaN	NaN	0	NaN	4585	2768	7348
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7373	21.983	NaN	61622	30	0	10110	0.173			+	-1	KTRKTMMVQ	9	83	569.8077034735177	1137.6008540138353	2	569.808837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_KTRKTM(Oxidation (M))MVQ_	REV__ENST00000469448.1_1_X:118673692-118676584:-|nuORF	96.19043198914106	0.047412499214244314	4				NaN	NaN	0	NaN	4600	2771	7372
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7374	21.986	NaN	20546	30	0	2389.4	0.106	+			16207	HECASINRI	9	92	550.2685256878165	1098.5224984424328	2	550.26953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_HEC(Carbamidomethyl (C))ASINRI_	ENSG00000172531|ENST00000376745|PPP1CA;ENSG00000186298|ENST00000335007|PPP1CC;ENSG00000213639|ENST00000395366|PPP1CB;ENST00000526510.5_1_11:67166008-67168740:-|nuORF;ENST00000532446.5_1_11:67166008-67168991:-|nuORF;nc|ENSG00000172531|P62136-2|PPP1CA;nc|ENSG00000172531|P62136-3|PPP1CA;nc|ENSG00000186298|P36873-2|PPP1CC;PPP1CB|p.E217Rfs*3|1|0.29|ENSG00000213639|chr2:28788708-28788709|-/G|frameshift_variant	82.7504851949679	0.08565546331141553	4				NaN	NaN	0	NaN	4601	2771	7372
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7375	21.988	NaN	12283	30	0	2420.8	0.106				-1	 	0	79	476.259995269979	475.252718803379	1	476.2606201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4602	2771	7372
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7376	21.99	NaN	31603	30	0	4022.4	0.106	+			22315	KTFEGNLTTK	10	104	380.20825267437226	NaN	0	380.20819091796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTFEGNLTTK_	ENSG00000174231|ENST00000304992|PRPF8	92.23892857375223	0.045399032405053316	4				NaN	NaN	0	NaN	4603	2771	7372
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7377	21.992	NaN	18307	30	0	2826.3	0.106			+	43876	TMLACAVER	9	87	497.24594126568826	992.4773295981765	2	497.24652099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TMLACAVER_	REV__SLC29A2|p.G431C|1|0.37|ENSG00000174669|chr11:66363516-66363516|C/A|missense_variant	76.16968421966216	0.11411088698345859	4				NaN	NaN	0	NaN	4604	2771	7372
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7378	21.993	NaN	9407	30	0	1086.1	0.106	+			15373	GTVYFKEGK	9	77	514.7727456690708	NaN	0	514.7737426757812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTVYFKEGK_	ENSG00000004478|ENST00000001008|FKBP4	85.16082228582465	0.053699699744190164	4				NaN	NaN	0	NaN	4605	2771	7372
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7379	21.995	NaN	12238	30	0	783.81	0.034			+	9075	EGGSVQKLI	9	78	465.7656696156354	929.5167862980708	2	465.76617431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EGGSVQKLI_	REV__ENSG00000164190|ENST00000282516|NIPBL;REV__nc|ENSG00000164190|Q6KC79-2|NIPBL;REV__NIPBL|p.E1635K|1|0.05|ENSG00000164190|chr5:37017145-37017145|G/A|missense_variant;REV__NIPBL|p.I2776Lfs*3|1|0.17|ENSG00000164190|chr5:37064797-37064797|A/-|frameshift_variant;REV__NIPBL|p.L2220Ffs*3|1|0.21|ENSG00000164190|chr5:37048567-37048568|-/T|frameshift_variant;REV__NIPBL|p.R1636H|1|0.37|ENSG00000164190|chr5:37017149-37017149|G/A|missense_variant	62.107414245175825	0.1960472003779324	4				NaN	NaN	0	NaN	4606	2771	7372
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7397	22.031	NaN	48185	30	0	7813	0.201				-1	 	0	106	481.25812445929927	960.5016959853986	2	481.2584533691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4621	2774	7396
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7398	22.035	NaN	32169	30	0	2883.5	0.106	+			46905	VISRAISVK	9	83	486.8126822942857	971.6108116553714	2	486.8135070800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VISRAISVK_	ENST00000530759.1_1_11:76155338-76155506:-|nuORF	82.7504851949679	0.08565546331141553	4				NaN	NaN	0	NaN	4622	2774	7396
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7399	22.037	NaN	31798	30	0	10136	0.106	+			45748	VAEALRAPRA	10	60	351.87610511675376	1052.6064859504613	3	351.876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VAEALRAPRA_	ENSG00000128309|ENST00000429360|MPST;ENST00000485587.1_1_22:37419962-37421138:+|nuORF;nc|ENSG00000128309|P25325|MPST	29.170058357718403	0.6416167986984785	4				NaN	NaN	0	NaN	4623	2774	7396
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7400	22.038	NaN	34277	30	0	7300.2	0.106				-1	 	0	89	527.3111094674296	1052.607666001659	2	527.3118896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4624	2774	7396
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7401	22.04	NaN	19941	30	0	9279	0.106	+			5200	ATTRVSLRT	9	60	335.53253041342896	1003.5757618404868	3	335.5330810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATTRVSLRT_	ENST00000541815.1_1_12:14407988-14408030:+|nuORF	19.1035232394073	0.6112419832031293	4				NaN	NaN	0	NaN	4625	2774	7396
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7402	22.042	NaN	32508	30	0	14030	0.106				-1	 	0	68	408.22520814474893	814.4358633562979	2	408.22576904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4626	2774	7396
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7403	22.044	NaN	18459	30	0	2672.9	0.036	+			23333	KYSLVKNKI	9	87	546.8417281913462	1091.6689034494923	2	546.8428344726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KYSLVKNKI_	ENSG00000188643|ENST00000368706|S100A16;ENST00000474991.1_1_1:153580188-153585458:-|nuORF	145.15565482312357	0.00806134135205793	4				NaN	NaN	0	NaN	4627	2774	7396
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7421	22.08	NaN	140120	30	0	14940	0.148	+			24208	LERKVESL	8	99	487.286858524006	972.559164114812	2	487.287353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LERKVESL_	ENSG00000026025|ENST00000544301|VIM;ENST00000421459.2_2_10:17272631-17276850:+|nuORF	115.49404669440601	0.24099756539272307	4				NaN	NaN	0	NaN	4642	2777	7420
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7422	22.083	NaN	73269	30	0	8477.5	0.106				-1	 	0	104	525.7763950682237	1049.5382372032473	2	525.77734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4643	2777	7420
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7423	22.085	NaN	41611	30	0	12222	0.106				-1	 	0	85	418.59025058559365	1252.748922356981	3	418.5906677246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4644	2777	7420
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7424	22.087	NaN	12099	30	0	2969.6	0.106	+			7244	DALLRQIR	8	81	492.79997248159407	983.5853920299882	2	492.8008728027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DALLRQIR_	ENSG00000101972|ENST00000371145|STAG2;nc|ENSG00000101972|Q8N3U4|STAG2;STAG2|p.T1208Kfs*3|1|0.87|ENSG00000101972|chrX:124095400-124095400|C/-|frameshift_variant	44.116797842482775	0.6307669463330267	4				NaN	NaN	0	NaN	4645	2777	7420
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7425	22.089	NaN	54359	30	0	11188	0.106	+			12892	GESAVGKSSL	10	83	467.7450812340267	933.4756095348534	2	467.7454833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GESAVGKSSL_	ENSG00000108774|ENST00000346213|RAB5C;ENSG00000111540|ENST00000360299|RAB5B;ENSG00000144566|ENST00000273047|RAB5A;ENST00000476544.1_1_3:19992384-19992582:+|nuORF;ENST00000546810.1_1_12:56367874-56383936:+|nuORF;ENST00000550013.1_1_17:40282343-40282577:-|nuORF;nc|ENSG00000108774|P51148-2|RAB5C;nc|ENSG00000111540|P61020-2|RAB5B;nc|ENSG00000144566|P20339-2|RAB5A	133.9934435666947	0.012355562819581703	4				NaN	NaN	0	NaN	4646	2777	7420
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7426	22.09	NaN	25809	30	0	6493	0.106				-1	 	0	77	325.19356718256586	972.5588721478975	3	325.194091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4647	2777	7420
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7427	22.092	NaN	17991	30	0	1867.3	0.038	+			38104	SPVNSSKQPSY	11	81	597.2928764340205	1192.571199934841	2	597.2936401367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SPVNSSKQPSY_	ENSG00000159199|ENST00000393366|ATP5MC1;ENST00000502964.5_1_17:46971694-46973128:+|nuORF;ENST00000513781.5_1_17:46970480-46973128:+|nuORF	176.59839592901017	1.0526362544376656E-05	4				NaN	NaN	0	NaN	4648	2777	7420
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7445	22.13	NaN	73492	30	0	9493.7	0.214			+	-1	NLRKVIMNN	9	129	373.2093743519648	1116.6062936560945	3	373.5416564941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_NLRKVIM(Oxidation (M))NN_	REV__ENSG00000181016|ENST00000312849|LSMEM1	30.317721548370564	0.5199124245378496	4				NaN	NaN	0	NaN	4663	2780	7444
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7446	22.133	NaN	19386	30	0	3368.1	0.106	+			4724	ATMEVKVGR	9	82	495.7730259471554	989.5314989611109	2	495.7734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATMEVKVGR_	ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1	98.58198989935565	0.04066992115528678	4				NaN	NaN	0	NaN	4664	2780	7444
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7447	22.135	NaN	14529	30	0	3381.1	0.106				-1	 	0	62	350.8531813275475	1049.5377145828425	3	350.8536682128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4665	2780	7444
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7448	22.137	NaN	18413	30	0	3415.7	0.106	+			34772	RYIAQVKHL	9	93	376.56069141129785	1126.6602448340936	3	376.56097412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RYIAQVKHL_	ENST00000267068.5_2_13:33110791-33110824:-|nuORF	75.04331003522576	0.118981335847003	4				NaN	NaN	0	NaN	4666	2780	7444
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7449	22.139	NaN	17462	30	0	5941.9	0.106	+			4725	ATMEVKVGR	9	56	330.85090907935864	989.5308978382759	3	330.8515930175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATMEVKVGR_	ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1	44.116797842482775	0.37197099687881774	4				NaN	NaN	0	NaN	4667	2780	7444
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7450	22.141	NaN	23906	30	0	4178.2	0.036	+			2459	APLKSKMIY	9	87	533.8012745100233	1065.5879960868465	2	533.8021850585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_APLKSKM(Oxidation (M))IY_	ENSG00000125868|ENST00000246069|DSTN;ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65623104-65623215:-|nuORF;ENST00000602547.1_1_12:6994092-6994545:+|nuORF;nc|ENSG00000125868|P60981-2|DSTN;nc|ENSG00000165410|Q9Y281-3|CFL2	98.62937762414208	0.04060045538121712	4				NaN	NaN	0	NaN	4668	2780	7444
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7451	22.141	NaN	7586.3	30	0	1902.6	0.145			+	46627	VGAERLLHLP	10	55	368.8890291602065	NaN	0	368.8889465332031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VGAERLLHLP_	REV__ENST00000580011.1_1_17:62082465-62082525:-|nuORF	44.377184641726394	0.34115073642966565	4				NaN	NaN	0	NaN	4669	2780	7444
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7469	22.181	NaN	52700	30	0	17717	0.214			+	21292	KLRRGEAHK	9	110	365.5566127918398	1093.6480089757194	3	365.55706787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KLRRGEAHK_	REV__ENST00000416295.1_1_3:50312110-50312520:+|nuORF	58.78195531508484	0.22376836668196862	4				NaN	NaN	0	NaN	4684	2783	7468
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7470	22.184	NaN	6941.1	30	0	1002.9	0.106	+			38922	SSPTGRRASP	10	69	508.2684360075904	1014.5223190819809	2	508.31640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSPTGRRASP_	RBM24|p.L18Cfs*66|1|0.05|ENSG00000112183|chr6:17281627-17281627|G/-|frameshift_variant	64.20726635412375	0.3275756395432415	4				NaN	NaN	0	NaN	4685	2783	7468
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7471	22.186	NaN	8673.3	30	0	763.29	0.106	+			6204	AVQRTLLEK	9	74	529.3208797093913	1056.6272064855825	2	529.322021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVQRTLLEK_	ENSG00000002586|ENST00000381192|CD99;ENST00000381177.6_1_X:2656215-2658842:+|nuORF;nc|ENSG00000292348|P14209-3|CD99	79.48907831485694	0.09975780661107167	4				NaN	NaN	0	NaN	4686	2783	7468
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7472	22.188	NaN	14456	30	0	3851.3	0.106			+	27809	MSHGVQSP	8	78	421.6942500433992	841.3739471535985	2	421.6947937011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MSHGVQSP_	REV__ENST00000342537.7_1_14:105268810-105268885:+|nuORF	42.396135135203025	0.6414440140393314	4				NaN	NaN	0	NaN	4687	2783	7468
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7473	22.19	NaN	9269.8	30	0	875.51	0.106	+			48312	VTETAKVNI	9	79	487.7792800308304	NaN	0	487.79278564453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTETAKVNI_	ENSG00000185775|ENST00000332857|SPATA31A6;ENSG00000204849|ENST00000377647|SPATA31A1;ENSG00000275969|ENST00000428649|SPATA31A3;ENSG00000276040|ENST00000619167|SPATA31A7;ENSG00000276581|ENST00000437823|SPATA31A5;SPATA31A1|p.T1192Nfs*14|1|0.28|ENSG00000204849|chr9:39361333-39361334|-/A|frameshift_variant;SPATA31A1|p.T1192Qfs*2|2|0.24|ENSG00000204849|chr9:39361334-39361334|A/-|frameshift_variant;SPATA31A3|p.S1180Kfs*9|1|0.25|ENSG00000275969|chr9:66986959-66986960|-/T|frameshift_variant;SPATA31A6|p.N1191Tfs*16|1|0.12|ENSG00000185775|chr9:42189269-42189269|A/-|frameshift_variant;SPATA31A6|p.T1188Qfs*2|1|0.26|ENSG00000185775|chr9:42189259-42189259|A/-|frameshift_variant	53.351449002276354	0.18359631779194618	4				NaN	NaN	0	NaN	4688	2783	7468
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7474	22.192	NaN	15183	30	0	2908.6	0.036				-1	 	0	88	339.5096070656434	1015.5069917971302	3	339.5101013183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4689	2783	7468
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7475	22.192	NaN	9791.7	30	0	887.57	0.141	+			20840	KIIEVHVEK	9	79	547.8315189890922	1093.6484850449842	2	547.8323974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KIIEVHVEK_	ENSG00000140403|ENST00000394852|DNAJA4;ENST00000485075.1_1_15:78562865-78566840:+|nuORF;nc|ENSG00000140403|Q8WW22-2|DNAJA4;nc|ENSG00000140403|Q8WW22-3|DNAJA4	82.83050618871818	0.08530945204495013	4				NaN	NaN	0	NaN	4690	2783	7468
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7493	22.23	NaN	678020	30	0	175570	0.102	+			12341	GDKGRLCLQK	10	98	373.2093743519648	1116.6062936560945	3	373.20977783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GDKGRLCLQK_	AluSc_dup13832|chr7:33006087-33006413:-|3.3176111198493|0.4159080058002372|3.0|482.0|7|2|sense	53.08895987439943	0.42869529153390606	4				NaN	NaN	0	NaN	4705	2786	7492
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7494	22.232	NaN	82096	30	0	14371	0.106	+			12942	GESSGKNVTL	10	95	496.2555099671223	990.4964670010446	2	496.2560729980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GESSGKNVTL_	ENSG00000174444|ENST00000307961|RPL4;ENST00000561554.5_1_15:66795666-66797161:-|nuORF;ENST00000561775.5_1_15:66795189-66797161:-|nuORF;ENST00000564439.5_1_15:66793756-66797161:-|nuORF;ENST00000566039.5_1_15:66793707-66797161:-|nuORF;ENST00000566622.5_1_15:66794044-66797161:-|nuORF;ENST00000566624.5_1_15:66794944-66797161:-|nuORF;ENST00000567229.5_1_15:66795359-66797161:-|nuORF	98.75417337143367	0.08139658455556813	4				NaN	NaN	0	NaN	4706	2786	7492
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7495	22.234	NaN	122010	30	0	54543	0.106				-1	 	0	79	327.1937325813481	978.5593683442444	3	327.19415283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4707	2786	7492
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7496	22.236	NaN	38633	30	0	4552.3	0.106			+	13907	GRKPAPAP	8	75	397.2372568752877	792.4599608173754	2	397.23748779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GRKPAPAP_	REV__ENSG00000129028|ENST00000249861|THAP10	15.63621529709179	0.7929342111279789	4				NaN	NaN	0	NaN	4708	2786	7492
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7497	22.237	NaN	19499	30	0	3927.4	0.106	+			19275	KAFNQGKIFK	10	94	590.8444946016003	1179.6744362700006	2	590.8455200195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KAFNQGKIFK_	ENSG00000254772|ENST00000329251|EEF1G;ENST00000526409.5_1_11:62327153-62342310:-|nuORF;nc|ENSG00000254772|P26641-2|EEF1G;NCEH1-EEF1G|1|fusion	157.32903759742106	0.007194212422862153	4				NaN	NaN	0	NaN	4709	2786	7492
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7498	22.239	NaN	68060	30	0	15187	0.106				-1	 	0	92	486.3154210365702	970.6162891399405	2	486.3155517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4710	2786	7492
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7499	22.241	NaN	126240	30	0	56526	0.035				-1	 	0	94	324.54593220959293	970.6159672289789	3	324.54638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4711	2786	7492
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7500	22.242	NaN	24710	30	0	7199	0.141	+			31098	QFQHLVAFK	9	86	559.3097943558705	1116.605035778541	2	559.3114624023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_QFQHLVAFK_	ENST00000352732.9_1_15:89738886-89738976:+|nuORF	102.7733458925114	0.03637199559902695	4				NaN	NaN	0	NaN	4712	2786	7492
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7518	22.279	NaN	26015	30	0	4373.8	0.214	+			46857	VIIAKVTAK	9	90	471.82046010062925	941.6263672680585	2	471.8206481933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VIIAKVTAK_	ENSG00000155008|ENST00000373173|APOOL	145.15565482312357	0.00806134135205793	4				NaN	NaN	0	NaN	4727	2789	7517
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7519	22.282	NaN	15367	30	0	9327.7	0.106	+			281	AAPATRAAL	9	66	421.2477706004425	840.480988267685	2	421.2480163574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAPATRAAL_	ENSG00000139370|ENST00000266771|SLC15A4	67.49366992349736	0.1516260258713357	4				NaN	NaN	0	NaN	4728	2789	7517
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7520	22.284	NaN	12143	30	0	3005.4	0.106			+	49083	VVKTLAGK	8	75	408.2705380965134	814.5265232598268	2	408.2710266113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVKTLAGK_	REV__OR1F1|p.K302T|1|0.21|ENSG00000168124|chr16:3205151-3205151|A/C|missense_variant	71.87747018426188	0.391254423828572	4				NaN	NaN	0	NaN	4729	2789	7517
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7521	22.286	NaN	18712	30	0	6989.5	0.106	+			15250	GTTAVLTEK	9	75	460.2577053691689	918.5008578051378	2	460.2581481933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTTAVLTEK_	ENSG00000136930|ENST00000259457|PSMB7	72.87924865735499	0.12833875048249987	4				NaN	NaN	0	NaN	4730	2789	7517
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7522	22.288	NaN	18723	30	0	5074.4	0.106	+			6365	AVTTVVNPK	9	71	464.7761970255942	927.5378411179884	2	464.7763366699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVTTVVNPK_	ENSG00000150093|ENST00000302278|ITGB1	118.74307786436346	0.02196067127630568	4				NaN	NaN	0	NaN	4731	2789	7517
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7523	22.29	NaN	15071	30	0	4690	0.037	+			46762	VGSVKENSRI	10	69	363.54073039694447	1087.6003617910335	3	363.5413513183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VGSVKENSRI_	ENSG00000165323|ENST00000525166|FAT3;FAT3|p.A1047Cfs*51|2|0.18|ENSG00000165323|chr11:92524922-92524923|-/T|frameshift_variant;FAT3|p.F1046Lfs*9|1|0.5|ENSG00000165323|chr11:92524923-92524923|T/-|frameshift_variant;FAT3|p.N1793Kfs*14|1|0.21|ENSG00000165323|chr11:92798835-92798836|-/A|frameshift_variant;FAT3|p.P4078Rfs*36|1|0.42|ENSG00000165323|chr11:92883135-92883135|C/-|frameshift_variant;FAT3|p.V1884Sfs*21|1|0.26|ENSG00000165323|chr11:92799110-92799110|G/-|frameshift_variant;FAT3|p.V4082Rfs*13|1|0.23|ENSG00000165323|chr11:92883145-92883146|-/C|frameshift_variant;FAT3|p.V4210Cfs*6|1|0.05|ENSG00000165323|chr11:92889212-92889213|-/T|frameshift_variant;nc|ENSG00000165323|Q8TDW7-2|FAT3;nc|ENSG00000165323|Q8TDW7|FAT3	31.634271133179894	0.6214930414500597	4				NaN	NaN	0	NaN	4732	2789	7517
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7524	22.29	NaN	8360.6	30	0	837.47	0.138	+			12420	GEAPGRASL	9	70	429.2267440357858	856.4389351383717	2	429.2272644042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GEAPGRASL_	ENST00000577380.5_1_17:73467910-73481983:+|nuORF;ENST00000585277.1_1_17:73467910-73481792:+|nuORF	65.46538089061403	0.16805504838372562	4				NaN	NaN	0	NaN	4733	2789	7517
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7542	22.328	NaN	165300	30	0	37347	0.167	+			22296	KTDVDPLDE	9	113	516.2482761521389	1030.4819993710778	2	516.2489013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTDVDPLDE_	DENND4C|p.F1650Yfs*12|1|0.38|ENSG00000137145|chr9:19358095-19358096|TT/-|frameshift_variant;DENND4C|p.R1677Dfs*12|1|0.24|ENSG00000137145|chr9:19360255-19360255|A/-|frameshift_variant;ENSG00000137145|ENST00000434457|DENND4C;ENST00000380437.8_1_9:19290781-19335045:+|nuORF;nc|ENSG00000137145|Q5VZ89-3|DENND4C;nc|ENSG00000137145|Q5VZ89-5|DENND4C;nc|ENSG00000137145|Q5VZ89|DENND4C	75.04331003522576	0.118981335847003	4				NaN	NaN	0	NaN	4748	2792	7541
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7543	22.331	NaN	189020	30	0	65610	0.106				-1	 	0	100	437.21386398505416	872.4131750369083	2	437.2141418457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4749	2792	7541
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7544	22.333	NaN	100300	30	0	40002	0.106	+			22297	KTDVDPLDE	9	89	344.5011355782545	1030.4815773349635	3	344.5015869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KTDVDPLDE_	DENND4C|p.F1650Yfs*12|1|0.38|ENSG00000137145|chr9:19358095-19358096|TT/-|frameshift_variant;DENND4C|p.R1677Dfs*12|1|0.24|ENSG00000137145|chr9:19360255-19360255|A/-|frameshift_variant;ENSG00000137145|ENST00000434457|DENND4C;ENST00000380437.8_1_9:19290781-19335045:+|nuORF;nc|ENSG00000137145|Q5VZ89-3|DENND4C;nc|ENSG00000137145|Q5VZ89-5|DENND4C;nc|ENSG00000137145|Q5VZ89|DENND4C	31.529811441608018	0.5085848003137583	4				NaN	NaN	0	NaN	4750	2792	7541
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7545	22.334	NaN	9866.4	30	0	936.49	0.106	+			23252	KYIQRQETI	9	77	589.8294566735889	1177.6443604139777	2	589.8301391601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KYIQRQETI_	ENSG00000157601|ENST00000398598|MX1;MX1|p.G282Afs*9|1|0.29|ENSG00000157601|chr21:41441827-41441827|G/-|frameshift_variant;MX1|p.M372Cfs*4|1|0.37|ENSG00000157601|chr21:41445548-41445548|A/-|frameshift_variant;nc|ENSG00000157601|P20591-2|MX1	166.67852932204877	0.003333876602083393	4				NaN	NaN	0	NaN	4751	2792	7541
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7546	22.336	NaN	9129.9	30	0	944.08	0.106			+	28650	NLISNKRKE	9	71	551.3221782345846	1100.6298035359691	2	551.32275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NLISNKRKE_	REV__CFTR|p.E1044Dfs*20|1|0.04|ENSG00000001626|chr7:117610661-117610662|-/TCAAAGAAAAC|frameshift_variant;REV__CFTR|p.G1208Afs*3|1|0.3|ENSG00000001626|chr7:117627672-117627672|G/-|frameshift_variant;REV__CFTR|p.G694_E695insVL|1|0.08|ENSG00000001626|chr7:117592248-117592249|-/AGTTCT|inframe_insertion;REV__CFTR|p.L1258Ffs*7|1|0.26|ENSG00000001626|chr7:117642487-117642488|-/T|frameshift_variant;REV__CFTR|p.S1297Lfs*31|1|0.28|ENSG00000001626|chr7:117652852-117652852|T/-|frameshift_variant;REV__ENSG00000001626|ENST00000003084|CFTR;REV__nc|ENSG00000001626|P13569-2|CFTR	49.536043120802724	0.308405419312776	4				NaN	NaN	0	NaN	4752	2792	7541
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7547	22.338	NaN	10810	30	0	917.45	0.106	+			36233	SEMCKVVFA	9	75	338.49765283455037	1012.4711291038511	3	338.4981384277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SEMCKVVFA_	ENSG00000138823|ENST00000265517|MTTP;MTTP|p.N874K|1|0.16|ENSG00000138823|chr4:99622785-99622785|C/A|missense_variant	40.77816245573522	0.41113185337114944	4				NaN	NaN	0	NaN	4753	2792	7541
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7548	22.34	NaN	10290	30	0	1899.1	0.033			+	46024	VAVRPAEL	8	65	427.75765135486716	853.5007497765343	2	427.7580871582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VAVRPAEL_	REV__RHPN1|p.V681Sfs*93|1|0.37|ENSG00000158106|chr8:143382598-143382599|-/C|frameshift_variant	55.50420428727701	0.5462892107279674	4				NaN	NaN	0	NaN	4754	2792	7541
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7566	22.377	NaN	33733	30	0	9680.1	0.214	+			39716	STIPSTAMHTR	11	73	401.20413644216694	1200.590579926701	3	401.20458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STIPSTAMHTR_	ENSG00000145113|ENST00000463781|MUC4;MUC4|p.N4902Tfs*8|1|0.37|ENSG00000145113|chr3:195761027-195761027|T/-|frameshift_variant;nc|ENSG00000145113|Q99102-10|MUC4;nc|ENSG00000145113|Q99102-11|MUC4;nc|ENSG00000145113|Q99102-13|MUC4;nc|ENSG00000145113|Q99102-15|MUC4;nc|ENSG00000145113|Q99102-16|MUC4;nc|ENSG00000145113|Q99102-17|MUC4;nc|ENSG00000145113|Q99102-2|MUC4;nc|ENSG00000145113|Q99102-3|MUC4;nc|ENSG00000145113|Q99102-5|MUC4;nc|ENSG00000145113|Q99102-7|MUC4;nc|ENSG00000145113|Q99102-8|MUC4;nc|ENSG00000145113|Q99102-9|MUC4	48.601550744091256	0.44024757269956427	4				NaN	NaN	0	NaN	4769	2795	7565
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7567	22.381	NaN	31575	30	0	3438.7	0.106	+			34167	RTATIMIQK	9	98	531.3095638767367	1060.6045748202732	2	531.310791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RTATIMIQK_	ENSG00000167306|ENST00000285039|MYO5B	114.85826248499774	0.024312442104607014	4				NaN	NaN	0	NaN	4770	2795	7565
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7568	22.383	NaN	10925	30	0	2604.8	0.106	+			46833	VIEHIQVNK	9	77	360.54467147404375	1078.6121850223312	3	360.54510498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VIEHIQVNK_	ENSG00000265681|ENST00000580261|RPL17;ENST00000394133.2_1_10:95043842-95044274:-|nuORF;ENST00000414070.1_1_1:109535017-109535455:+|nuORF;ENST00000446498.1_1_1:26781156-26781564:-|nuORF;nc|ENSG00000265681|P18621-2|RPL17;nc|ENSG00000265681|P18621-3|RPL17	40.77816245573522	0.41113185337114944	4				NaN	NaN	0	NaN	4771	2795	7565
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7569	22.385	NaN	8434.4	30	0	1874.9	0.106	+			8070	DVNIRNTY	8	66	497.7507655549518	993.4869781767036	2	497.75115966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DVNIRNTY_	CASKIN2|p.P339Rfs*95|3|0.33|ENSG00000177303|chr17:75504988-75504988|G/-|frameshift_variant;ENSG00000177303|ENST00000321617|CASKIN2;nc|ENSG00000177303|Q8WXE0-2|CASKIN2	73.97473282117947	0.3737790450121076	4				NaN	NaN	0	NaN	4772	2795	7565
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7570	22.386	NaN	15490	30	0	1463.7	0.106	+			34478	RVCDAVKALK	10	88	387.2252290292309	1158.6538576878927	3	387.2254638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_RVC(Carbamidomethyl (C))DAVKALK_	ENSG00000023697|ENST00000428559|DERA;ENST00000528821.5_1_12:16109876-16185684:+|nuORF	77.53327743719008	0.21577387331637743	4				NaN	NaN	0	NaN	4773	2795	7565
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7571	22.388	NaN	10608	30	0	614.44	0.036	+			46834	VIEHIQVNK	9	73	540.3135427411388	1078.6125325490775	2	540.3143310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VIEHIQVNK_	ENSG00000265681|ENST00000580261|RPL17;ENST00000394133.2_1_10:95043842-95044274:-|nuORF;ENST00000414070.1_1_1:109535017-109535455:+|nuORF;ENST00000446498.1_1_1:26781156-26781564:-|nuORF;nc|ENSG00000265681|P18621-2|RPL17;nc|ENSG00000265681|P18621-3|RPL17	104.0567914643314	0.03506238181059741	4				NaN	NaN	0	NaN	4774	2795	7565
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7572	22.389	NaN	26128	30	0	5467.1	0.14	+			5006	ATSAPLVSR	9	88	451.25755540547715	900.5005578777543	2	451.2581481933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATSAPLVSR_	CELSR1|p.G1602Vfs*104|1|0.17|ENSG00000075275|chr22:46410526-46410526|C/-|frameshift_variant;CELSR1|p.I2650Sfs*5|1|0.42|ENSG00000075275|chr22:46369187-46369187|T/-|frameshift_variant;CELSR1|p.R2275Qfs*18|1|0.18|ENSG00000075275|chr22:46384603-46384604|-/G|frameshift_variant;CELSR1|p.T1849Rfs*8|2|0.25|ENSG00000075275|chr22:46397831-46397831|C/-|frameshift_variant;CELSR2-KIAA1324|1|fusion;CELSR2|p.G1044Vfs*17|1|0.42|ENSG00000143126|chr1:109253206-109253206|G/-|frameshift_variant;CELSR2|p.P2879Lfs*14|1|0.28|ENSG00000143126|chr1:109273557-109273557|C/-|frameshift_variant;CELSR2|p.V2215Wfs*26|2|0.42|ENSG00000143126|chr1:109269115-109269115|C/-|frameshift_variant;CELSR3|p.A2340Pfs*45|1|0.25|ENSG00000008300|chr3:48647952-48647952|C/-|frameshift_variant;CELSR3|p.R2529Pfs*2|1|0.34|ENSG00000008300|chr3:48645746-48645747|-/G|frameshift_variant;CELSR3|p.S1935Afs*4|1|0.38|ENSG00000008300|chr3:48651998-48651998|G/-|frameshift_variant;ENSG00000008300|ENST00000164024|CELSR3;ENSG00000075275|ENST00000674500|CELSR1;ENSG00000143126|ENST00000271332|CELSR2;ENST00000497509.1_1_22:46926386-46930076:-|nuORF;nc|ENSG00000008300|Q9NYQ7-2|CELSR3;nc|ENSG00000075275|Q9NYQ6-2|CELSR1;nc|ENSG00000075275|Q9NYQ6|CELSR1	67.49366992349736	0.1516260258713357	4				NaN	NaN	0	NaN	4775	2795	7565
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7590	22.428	NaN	77668	30	0	14657	0.214			+	33396	RICGYHVVQ	9	94	537.779785056045	1073.5450171788898	2	537.7809448242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RICGYHVVQ_	REV__CUL3|p.R153H|1|0.25|ENSG00000036257|chr2:224514693-224514693|C/T|missense_variant	63.30626980617807	0.18605348971131092	4				NaN	NaN	0	NaN	4790	2798	7589
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7591	22.431	NaN	28225	30	0	11008	0.106				-1	 	0	79	487.2504254962531	972.4862980593063	2	487.2509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4791	2798	7589
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7592	22.433	NaN	48131	30	0	21338	0.106				-1	 	0	70	462.7661625229621	923.5177721127242	2	462.76654052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4792	2798	7589
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7593	22.435	NaN	13532	30	0	1805.2	0.106	+			36677	SGMQNMSIHTK	11	92	411.8613316849303	1232.5621656549908	3	411.86199951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SGMQNMSIHTK_	CON__H-INV:HIT000292931;CON__P05787;CON__REFSEQ:XP_092267;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	109.38876744936951	0.041277168889090256	4				NaN	NaN	0	NaN	4793	2798	7589
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7594	22.437	NaN	25732	30	0	3061.9	0.106				-1	MDLMSFAQI	9	102	363.164802708493	1086.472578725679	3	363.165283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Oxidation (M)	_M(Oxidation (M))DLM(Oxidation (M))SFAQI_	tr|U7SNH4|U7SNH4_FUSNUCitrate-sodiumsymporterOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01991PE=4SV=1	34.172542307311794	0.4838870758800184	4				NaN	NaN	0	NaN	4794	2798	7589
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7595	22.439	NaN	14718	30	0	1499.6	0.036	+			12177	GAMEHFHMK	9	77	544.2433954916274	1086.4722380500548	2	544.244873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GAMEHFHMK_	ENSG00000185825|ENST00000345046|BCAP31;nc|ENSG00000185825|P51572-2|BCAP31	98.58198989935565	0.04066992115528678	4				NaN	NaN	0	NaN	4795	2798	7589
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7596	22.439	NaN	11625	30	0	2776.1	0.145			+	41483	SVNVIRSPASE	11	79	386.87563239845224	1157.6050677955568	3	386.87445068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVNVIRSPASE_	REV__ENSG00000072042|ENST00000381346|RDH11;REV__ENST00000553578.5_1_14:68152963-68157118:-|nuORF;REV__nc|ENSG00000072042|Q8TC12-2|RDH11	31.529811441608018	0.6590691889962369	4				NaN	NaN	0	NaN	4796	2798	7589
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7614	22.479	NaN	164810	30	0	38100	0.186	+			38181	SQCGSLIGK	9	96	475.24134535142696	948.4681377696539	2	475.2419128417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SQC(Carbamidomethyl (C))GSLIGK_	ENSG00000090097|ENST00000461554|PCBP4;ENSG00000183570|ENST00000681687|PCBP3;ENSG00000197111|ENST00000546463|PCBP2;ENST00000468429.5_1_21:47321003-47359956:+|nuORF;ENST00000492809.5_1_3:51992079-51994784:-|nuORF;ENST00000497390.5_1_3:51992079-51994784:-|nuORF;ENST00000547717.1_1_12:53848575-53861193:+|nuORF;ENST00000548190.1_1_12:53849722-53854210:+|nuORF;nc|ENSG00000090097|P57723-2|PCBP4;nc|ENSG00000183570|P57721-2|PCBP3;nc|ENSG00000183570|P57721-3|PCBP3;nc|ENSG00000183570|P57721-4|PCBP3;nc|ENSG00000183570|P57721-5|PCBP3;nc|ENSG00000197111|Q15366-2|PCBP2;nc|ENSG00000197111|Q15366-4|PCBP2;nc|ENSG00000197111|Q15366-5|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;nc|ENSG00000197111|Q15366-7|PCBP2;nc|ENSG00000197111|Q15366-8|PCBP2;nc|ENSG00000197111|Q15366|PCBP2;PCBP2|p.T202Kfs*26|1|0.32|ENSG00000197111|chr12:53464773-53464773|C/-|frameshift_variant;PCBP4|p.G203Efs*11|1|0.1|ENSG00000090097|chr3:51959397-51959398|-/CTCT|frameshift_variant	120.30596017624542	0.02101454110788768	4				NaN	NaN	0	NaN	4811	2801	7613
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7615	22.482	NaN	35764	30	0	8028.5	0.106				-1	 	0	82	447.7370621656669	893.4595713981338	2	447.7373352050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4812	2801	7613
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7616	22.484	NaN	39516	30	0	22164	0.106				-1	KSPRFRMP	8	74	345.5240288850442	1033.5502572553326	3	345.52471923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_KSPRFRM(Oxidation (M))P_	nc|ENSG00000189348|A6NNH2|FAM90A27P	20.94693142431847	0.7975965917238792	4				NaN	NaN	0	NaN	4813	2801	7613
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7617	22.485	NaN	63976	30	0	6160.3	0.106				-1	 	0	98	470.2841883988598	938.5538238645196	2	470.28436279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4814	2801	7613
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7618	22.487	NaN	15132	30	0	1725.1	0.106	+			33064	REKITAQSI	9	93	523.3025788575444	1044.5906047818887	2	523.3038330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_REKITAQSI_	ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC;PRKDC|p.D2437Wfs*3|1|0.11|ENSG00000253729|chr8:47840161-47840162|-/CA|frameshift_variant;PRKDC|p.E1557Sfs*16|1|0.16|ENSG00000253729|chr8:47886051-47886051|C/-|frameshift_variant;PRKDC|p.K3681Nfs*6|1|0.32|ENSG00000253729|chr8:47785174-47785177|TTCT/-|frameshift_variant;PRKDC|p.M3670*|1|0.5|ENSG00000253729|chr8:47785212-47785212|T/-|frameshift_variant;PRKDC|p.M3846Cfs*12|1|0.13|ENSG00000253729|chr8:47779047-47779047|T/-|frameshift_variant;PRKDC|p.M4020Cfs*2|1|0.31|ENSG00000253729|chr8:47776968-47776968|T/-|frameshift_variant;PRKDC|p.N3605Kfs*3|1|0.22|ENSG00000253729|chr8:47788993-47788994|-/T|frameshift_variant;PRKDC|p.N4037Ifs*15|1|0.17|ENSG00000253729|chr8:47776916-47776916|T/-|frameshift_variant;PRKDC|p.R2704Gfs*13|2|0.34|ENSG00000253729|chr8:47834238-47834238|T/-|frameshift_variant;PRKDC|p.S3402Ifs*16|1|0.04|ENSG00000253729|chr8:47799302-47799303|-/AAACCGTGAGTTAGAGGAGGTAA|frameshift_variant;PRKDC|p.S4099Qfs*6|1|0.25|ENSG00000253729|chr8:47774265-47774265|A/-|frameshift_variant;PRKDC|p.T3268Pfs*7|1|0.5|ENSG00000253729|chr8:47803426-47803426|T/-|frameshift_variant;PRKDC|p.W3401Cfs*4|1|0.01|ENSG00000253729|chr8:47799304-47799305|-/AATGAATA|frameshift_variant	76.16968421966216	0.11411088698345859	4				NaN	NaN	0	NaN	4815	2801	7613
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7619	22.489	NaN	11087	30	0	1742.7	0.106	+			48781	VTYMIPLGL	9	83	503.7873531118969	NaN	0	503.7874755859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTYMIPLGL_	ENSG00000180638|ENST00000433844|SLC47A2;nc|ENSG00000180638|Q86VL8-2|SLC47A2;nc|ENSG00000180638|Q86VL8|SLC47A2	45.9519527083369	0.2345902329052062	4				NaN	NaN	0	NaN	4816	2801	7613
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7620	22.491	NaN	9557	30	0	1068.7	0.036			+	-1	EGTQEPVMW	9	78	546.7377763831298	1091.4609998330595	2	546.7390747070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_EGTQEPVM(Oxidation (M))W_	REV__ENST00000412495.5_1_20:61143906-61144038:-|nuORF	58.78195531508484	0.22376836668196862	4				NaN	NaN	0	NaN	4817	2801	7613
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7638	22.528	NaN	43866	30	0	4141	0.193	+			35300	SAMERICEK	9	88	533.755042837171	NaN	0	533.7548217773438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAMERICEK_	ENSG00000169710|ENST00000306749|FASN;FASN|p.A2037V|1|0.35|ENSG00000169710|chr17:82082062-82082062|G/A|missense_variant;FASN|p.R2049Q|1|0.55|ENSG00000169710|chr17:82082026-82082026|C/T|missense_variant	122.93914200107957	0.0016770443082379867	4				NaN	NaN	0	NaN	4832	2804	7637
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7639	22.531	NaN	37982	30	0	5872.2	0.106	+			46355	VEKPVGVAA	9	86	435.25781535984686	868.5010777864937	2	435.25811767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VEKPVGVAA_	ENSG00000131149|ENST00000253458|GSE1;ENST00000562659.1_1_16:85698640-85699994:+|nuORF;GSE1|p.P1093Qfs*45|1|0.45|ENSG00000131149|chr16:85668282-85668282|C/-|frameshift_variant;nc|ENSG00000131149|Q14687-2|GSE1;nc|ENSG00000131149|Q14687-3|GSE1	62.107414245175825	0.1960472003779324	4				NaN	NaN	0	NaN	4833	2804	7637
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7640	22.533	NaN	41925	30	0	16459	0.106	+			6400	AVVGGLDIHKK	11	75	379.5642911642613	1135.671044092984	3	379.5643615722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVVGGLDIHKK_	ENSG00000221823|ENST00000234310|PPP3R1	43.650786325866115	0.5079891456189096	4				NaN	NaN	0	NaN	4834	2804	7637
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7641	22.535	NaN	16586	30	0	3148.1	0.106	+			35318	SAMSNPRAM	9	81	482.71952237112316	963.4244918090463	2	482.72027587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SAMSNPRAM_	ENSG00000135018|ENST00000376395|UBQLN1;ENSG00000188021|ENST00000338222|UBQLN2;nc|ENSG00000135018|Q9UMX0-2|UBQLN1;nc|ENSG00000135018|Q9UMX0-3|UBQLN1;UBQLN2|p.P525Lfs*71|10|0.37|ENSG00000188021|chrX:56565441-56565441|C/-|frameshift_variant	98.58198989935565	0.04066992115528678	4				NaN	NaN	0	NaN	4835	2804	7637
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7642	22.537	NaN	12915	30	0	1387.9	0.106	+			46426	VERGPDEAM	9	84	502.2285943532859	1002.4426357733719	2	502.2291564941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VERGPDEAM_	ENSG00000024422|ENST00000263277|EHD2;ENST00000540884.1_1_19:48232905-48244686:+|nuORF;nc|ENSG00000024422|Q9NZN4-2|EHD2	72.87924865735499	0.12833875048249987	4				NaN	NaN	0	NaN	4836	2804	7637
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7643	22.539	NaN	8908.3	30	0	904.97	0.106	+			36382	SETHKAIQAL	10	76	549.3010980618908	1096.5876431905815	2	549.3013916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SETHKAIQAL_	ENSG00000179950|ENST00000526683|PUF60;nc|ENSG00000179950|Q9UHX1-2|PUF60;nc|ENSG00000179950|Q9UHX1-3|PUF60;nc|ENSG00000179950|Q9UHX1-4|PUF60;nc|ENSG00000179950|Q9UHX1-5|PUF60;nc|ENSG00000179950|Q9UHX1-6|PUF60	109.82975700811294	0.04850514657194457	4				NaN	NaN	0	NaN	4837	2804	7637
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7644	22.54	NaN	61287	30	0	22100	0.035				-1	 	0	82	327.5362661900375	979.5869691703126	3	327.536865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4838	2804	7637
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7662	22.577	NaN	72172	30	0	9287.1	0.214	+			3384	ASQCGSLIGK	10	96	510.7598363460439	1019.5051197588879	2	510.7606201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_ASQC(Carbamidomethyl (C))GSLIGK_	ENSG00000090097|ENST00000461554|PCBP4;ENSG00000183570|ENST00000681687|PCBP3;ENSG00000197111|ENST00000546463|PCBP2;ENST00000468429.5_1_21:47321003-47359956:+|nuORF;ENST00000492809.5_1_3:51992079-51994784:-|nuORF;ENST00000497390.5_1_3:51992079-51994784:-|nuORF;ENST00000547717.1_1_12:53848575-53861193:+|nuORF;ENST00000548190.1_1_12:53849722-53854210:+|nuORF;nc|ENSG00000090097|P57723-2|PCBP4;nc|ENSG00000183570|P57721-2|PCBP3;nc|ENSG00000183570|P57721-3|PCBP3;nc|ENSG00000183570|P57721-4|PCBP3;nc|ENSG00000183570|P57721-5|PCBP3;nc|ENSG00000197111|Q15366-2|PCBP2;nc|ENSG00000197111|Q15366-4|PCBP2;nc|ENSG00000197111|Q15366-5|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;nc|ENSG00000197111|Q15366-7|PCBP2;nc|ENSG00000197111|Q15366-8|PCBP2;nc|ENSG00000197111|Q15366|PCBP2;PCBP2|p.T202Kfs*26|1|0.32|ENSG00000197111|chr12:53464773-53464773|C/-|frameshift_variant;PCBP4|p.G203Efs*11|1|0.1|ENSG00000090097|chr3:51959397-51959398|-/CTCT|frameshift_variant	167.93327368760816	0.004342583126626421	4				NaN	NaN	0	NaN	4853	2807	7661
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7663	22.581	NaN	100880	30	0	55366	0.106	+			32340	QTVQGTFSK	9	90	498.2612517644429	NaN	0	498.2611389160156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QTVQGTFSK_	ENSG00000188112|ENST00000341865|C6orf132;nc|nan|Q5T0Z8-2|C6orf132;nc|nan|Q5T0Z8-4|C6orf132	123.20810148215591	0.0016355521601317592	4				NaN	NaN	0	NaN	4854	2807	7661
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7664	22.583	NaN	42404	30	0	12003	0.106				-1	GSRGVKLLCQ	10	99	373.2093743519648	1116.6062936560945	3	373.2098693847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_GSRGVKLLC(Carbamidomethyl (C))Q_	ENSG00000142405|ENST00000324134|NLRP12;ENST00000492915.1_1_19:54308952-54310969:-|nuORF;nc|ENSG00000142405|P59046-2|NLRP12;nc|ENSG00000142405|P59046-3|NLRP12;nc|ENSG00000142405|P59046-4|NLRP12;nc|ENSG00000142405|P59046-6|NLRP12;nc|ENSG00000142405|P59046-7|NLRP12	33.921630207806714	0.6028135429846169	4				NaN	NaN	0	NaN	4855	2807	7661
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7665	22.585	NaN	93643	30	0	27268	0.106				-1	 	0	89	479.27122490491723	956.5278968766345	2	479.2716064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4856	2807	7661
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7666	22.587	NaN	40971	30	0	3750.9	0.106	+			35870	SEDPSHPSM	9	98	493.6972080746901	985.3798632161802	2	493.6976318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SEDPSHPSM_	ENSG00000111642|ENST00000544040|CHD4;nc|ENSG00000111642|Q14839-2|CHD4	47.657333605630114	0.33044192980041115	4				NaN	NaN	0	NaN	4857	2807	7661
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7667	22.588	NaN	27156	30	0	9032.8	0.035	+			7730	DLTKHQTY	8	83	503.2526249205668	1004.4906969079336	2	503.25335693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DLTKHQTY_	ENSG00000132698|ENST00000361084|RAB25;ENST00000487325.5_1_1:156038076-156039544:+|nuORF	51.33545320467046	0.5859736979383976	4				NaN	NaN	0	NaN	4858	2807	7661
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7668	22.589	NaN	19247	30	0	3218.2	0.139				-1	 	0	88	384.72529218354777	767.4360314338956	2	384.72540283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4859	2807	7661
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7683	22.621	NaN	76986	30	0	24558	0.212			+	7328	DATYCVASI	9	90	500.22871490106735	NaN	0	500.22869873046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_DATYC(Carbamidomethyl (C))VASI_	REV__ENSG00000047936|ENST00000368507|ROS1;REV__nc|ENSG00000047936|P08922|ROS1;REV__ROS1|p.N1247Mfs*14|1|0.11|ENSG00000047936|chr6:117357918-117357918|T/-|frameshift_variant;REV__ROS1|p.N1821Tfs*2|1|0.44|ENSG00000047936|chr6:117326319-117326319|T/-|frameshift_variant	60.97194046774394	0.14517358171632622	4				NaN	NaN	0	NaN	4871	2810	7682
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7684	22.625	NaN	29804	30	0	6176.6	0.106	+			37051	SIRVTQKSYK	10	85	626.3556100016312	1250.6966670700624	2	626.3563842773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SIRVTQKSYK_	CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000550170.5_1_12:53294858-53298765:-|nuORF;KRT8|p.R18Gfs*56|1|0.24|ENSG00000170421|chr12:52904930-52904930|G/-|frameshift_variant;nc|ENSG00000170421|P05787-2|KRT8	105.16503226865211	0.06235809640390954	4				NaN	NaN	0	NaN	4872	2810	7682
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7685	22.627	NaN	61081	30	0	5613.7	0.106				-1	 	0	115	494.25834792584476	986.5021429184895	2	494.25885009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4873	2810	7682
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7686	22.628	NaN	21211	30	0	2795.2	0.106	+			11525	FPEEDKKTY	9	79	578.7791549915748	1155.5437570499496	2	578.7799072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FPEEDKKTY_	ENSG00000151366|ENST00000281031|NDUFC2;nc|ENSG00000151366|O95298-2|NDUFC2	159.27591364854348	0.004707062175358555	4				NaN	NaN	0	NaN	4874	2810	7682
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7687	22.63	NaN	55046	30	0	9196.8	0.106				-1	 	0	115	537.3312393521034	1072.6479257710066	2	537.3323364257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4875	2810	7682
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7688	22.632	NaN	48658	30	0	8900.7	0.038	+			11527	FPEEDKKTY	9	118	386.1888530914613	1155.544729874584	3	386.18890380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FPEEDKKTY_	ENSG00000151366|ENST00000281031|NDUFC2;nc|ENSG00000151366|O95298-2|NDUFC2	47.657333605630114	0.33044192980041115	4				NaN	NaN	0	NaN	4876	2810	7682
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7689	22.633	NaN	12276	30	0	731.61	0.141				-1	MGAPLSLVLSP	11	78	550.8060462888867	1099.5975396445733	2	550.8070068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_M(Oxidation (M))GAPLSLVLSP_	ENST00000593726.5_1_19:41305476-41306130:+|nuORF	62.107414245175825	0.30464354921554965	4				NaN	NaN	0	NaN	4877	2810	7682
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7707	22.671	NaN	180290	30	0	52665	0.196	+			3805	ATAGIIGVNRK	11	103	367.22368455933656	1098.6492242782097	3	367.2242126464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATAGIIGVNRK_	CLTC-CEP95|1|fusion;CLTC|p.A1374*|1|0.05|ENSG00000141367|chr17:59683464-59683465|-/TA|frameshift_variant;CLTC|p.D632Yfs*7|1|0.15|ENSG00000141367|chr17:59666589-59666590|-/TTACA|frameshift_variant;ENSG00000141367|ENST00000269122|CLTC;ENST00000472129.3_1_17:57725612-57733400:+|nuORF;nc|ENSG00000141367|Q00610-2|CLTC	77.53327743719008	0.17293716712445248	4				NaN	NaN	0	NaN	4892	2813	7706
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7708	22.674	NaN	77668	30	0	37862	0.106				-1	 	0	101	346.5251186285971	1036.5535264859914	3	346.5256652832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4893	2813	7706
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7709	22.676	NaN	73068	30	0	18579	0.106	+			15043	GTNPGIITK	9	92	450.7607238070731	899.5068946809462	2	450.7608642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTNPGIITK_	ENSG00000136247|ENST00000335965|ZDHHC4;ENST00000474097.5_1_7:6620192-6623202:+|nuORF	154.0112374973812	0.005934173778894772	4				NaN	NaN	0	NaN	4894	2813	7706
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7710	22.678	NaN	37222	30	0	13729	0.106	+			4209	ATFYGPVKK	9	67	337.5265246084584	1009.5577444255752	3	337.527099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATFYGPVKK_	ENSG00000036257|ENST00000264414|CUL3;ENST00000487558.1_1_2:225360464-225362517:-|nuORF;nc|ENSG00000036257|Q13618-2|CUL3;nc|ENSG00000036257|Q13618-3|CUL3	29.14955571784316	0.5308295550522326	4				NaN	NaN	0	NaN	4895	2813	7706
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7711	22.68	NaN	41906	30	0	10352	0.106				-1	CTLPGRHLRP	10	92	402.8893614492056	1205.6462549478167	3	402.8898620605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_C(Carbamidomethyl (C))TLPGRHLRP_	ENST00000178640.9_1_15:67835333-67835654:+|nuORF	37.50817390946774	0.5721060100277453	4				NaN	NaN	0	NaN	4896	2813	7706
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7712	22.682	NaN	49399	30	0	13422	0.106				-1	 	0	86	560.2743596903174	1118.5341664474347	2	560.2752685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4897	2813	7706
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7713	22.683	NaN	18484	30	0	5248.3	0.037				-1	 	0	81	361.2201671734877	1080.6386721206632	3	361.22076416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4898	2813	7706
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7731	22.721	NaN	55071	30	0	26432	0.215				-1	 	0	96	362.75848408115706	723.5024152291141	2	362.7589416503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4913	2816	7730
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7732	22.725	NaN	48814	30	0	8359.7	0.106	+			40947	SVFTSVRQK	9	93	526.2974335274387	1050.5803141216772	2	526.2982177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVFTSVRQK_	ENSG00000127616|ENST00000344626|SMARCA4;ENST00000585799.5_1_19:11132109-11172489:+|nuORF;ENST00000591595.5_1_19:11130023-11172489:+|nuORF;ENST00000592604.5_1_19:11123597-11172489:+|nuORF;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;nc|ENSG00000127616|P51532-5|SMARCA4	132.757866228626	0.013877640931359021	4				NaN	NaN	0	NaN	4914	2816	7730
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7733	22.727	NaN	91719	30	0	12455	0.106			+	4542	ATLCIMII	8	101	475.7558268430368	949.4971007528736	2	475.7560729980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_ATLC(Carbamidomethyl (C))IM(Oxidation (M))II_	REV__DUOXA1|p.F31C|1|0.05|ENSG00000140254|chr15:45122923-45122923|A/C|missense_variant	74.51659920185547	0.36926395944126233	4				NaN	NaN	0	NaN	4915	2816	7730
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7734	22.728	NaN	30554	30	0	13688	0.106				-1	 	0	59	351.20084767334254	1050.5807136202277	3	351.2012939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4916	2816	7730
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7735	22.73	NaN	9174.2	30	0	987.76	0.106	+			40930	SVFSDKLHSK	10	81	574.3086249688188	1146.6026970044375	2	574.3091430664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVFSDKLHSK_	ENSG00000187257|ENST00000334955|RSBN1L;nc|ENSG00000187257|Q6PCB5-2|RSBN1L;PTPN12-RSBN1L|1|fusion;PTPN12-RSBN1L|2|fusion;PTPN12-RSBN1L|3|fusion;PTPN12-RSBN1L|4|fusion;PTPN12-RSBN1L|5|fusion;PTPN12-RSBN1L|6|fusion;PTPN12-RSBN1L|7|fusion;PTPN12-RSBN1L|8|fusion	100.08592035916087	0.07744166218816861	4				NaN	NaN	0	NaN	4917	2816	7730
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7736	22.732	NaN	12072	30	0	1909.6	0.034	+			42107	SYKVSTSGP	9	66	463.2343227722952	924.4540926113904	2	463.2347106933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SYKVSTSGP_	CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000550170.5_1_12:53294858-53298765:-|nuORF;ENST00000562022.1_1_15:43093683-43094592:-|nuORF;KRT8|p.R18Gfs*56|1|0.24|ENSG00000170421|chr12:52904930-52904930|G/-|frameshift_variant;nc|ENSG00000170421|P05787-2|KRT8	134.7655990226056	0.012935733000282069	4				NaN	NaN	0	NaN	4918	2816	7730
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7737	22.733	NaN	13766	30	0	2622.1	0.139	+			44140	TQCGSLIGK	9	76	482.24884349155656	962.4831340499131	2	482.2497253417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_TQC(Carbamidomethyl (C))GSLIGK_	ENSG00000169564|ENST00000303577|PCBP1	76.16968421966216	0.11411088698345859	4				NaN	NaN	0	NaN	4919	2816	7730
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7755	22.77	NaN	32390	30	0	2708.9	0.214	+			42827	TEAVVKEKL	9	86	508.80234368652253	1015.5901344398451	2	508.8029479980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEAVVKEKL_	ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1	159.27591364854348	0.004707062175358555	4				NaN	NaN	0	NaN	4934	2819	7754
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7756	22.774	NaN	67558	30	0	20244	0.106	+			15414	GTYHGMTLK	9	92	504.25178558618546	1006.489018239171	2	504.25250244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTYHGMTLK_	ENSG00000134371|ENST00000367435|CDC73	75.04331003522576	0.118981335847003	4				NaN	NaN	0	NaN	4935	2819	7754
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7757	22.776	NaN	65777	30	0	11667	0.106	+			50221	WNLTPHLCRPG	11	105	647.3295715118137	1292.6445900904273	2	647.3312377929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_WNLTPHLCRPG_	ENST00000610085.1_1_7:148395177-148395648:-|nuORF	74.1650062923329	0.2010173757047072	4				NaN	NaN	0	NaN	4936	2819	7754
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7758	22.778	NaN	27271	30	0	9922.5	0.106	+			37969	SPHKGSYLY	9	86	526.2634039628988	1050.5122549925975	2	526.2642822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SPHKGSYLY_	ENSG00000103089|ENST00000219368|FA2H;ENST00000562145.1_1_16:74748090-74750623:-|nuORF;nc|ENSG00000103089|Q7L5A8-2|FA2H	51.19269402634007	0.2889735674168909	4				NaN	NaN	0	NaN	4937	2819	7754
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7759	22.779	NaN	27040	30	0	5597.6	0.106	+			34463	RTYVGSMPGR	10	91	562.2864142511366	1122.5582755690732	2	562.2877197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RTYVGSMPGR_	ENSG00000102910|ENST00000285737|LONP2;LONP2|p.D678Efs*7|1|0.07|ENSG00000102910|chr16:48347601-48347602|-/GT|frameshift_variant;nc|ENSG00000102910|Q86WA8-2|LONP2	92.23892857375223	0.11825556496531454	4				NaN	NaN	0	NaN	4938	2819	7754
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7760	22.781	NaN	17715	30	0	1453.3	0.035	+			38932	SSQNAFMQK	9	80	520.744360012316	1039.4741670914318	2	520.7454833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSQNAFMQK_	ENST00000533415.5_1_17:45247369-45258963:-|nuORF	176.44474024533739	0.0016668318535579616	4				NaN	NaN	0	NaN	4939	2819	7754
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7761	22.782	NaN	47491	30	0	17341	0.145	+			44867	TTVDKLIKKT	10	73	382.90817369371695	1145.7026916813509	3	382.9082946777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TTVDKLIKKT_	ENSG00000100678|ENST00000356921|SLC8A3;nc|ENSG00000100678|P57103-4|SLC8A3;nc|ENSG00000100678|P57103-5|SLC8A3;nc|ENSG00000100678|P57103-6|SLC8A3;nc|ENSG00000100678|P57103-7|SLC8A3;nc|ENSG00000100678|P57103|SLC8A3	19.1035232394073	0.7193765342308498	4				NaN	NaN	0	NaN	4940	2819	7754
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7779	22.821	NaN	29900	30	0	5123.8	0.215	+			2910	ASAYSIAQK	9	103	469.7503875341422	NaN	0	469.7503356933594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASAYSIAQK_	ENSG00000162813|ENST00000322067|BPNT1;nc|ENSG00000162813|O95861-2|BPNT1;nc|ENSG00000162813|O95861-4|BPNT1	195.06343300570734	0.00020972593520343112	4				NaN	NaN	0	NaN	4955	2822	7778
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7780	22.825	NaN	45914	30	0	27074	0.106			+	30120	PRPSRDPHP	9	94	529.778655296123	1057.542757659046	2	529.7797241210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PRPSRDPHP_	REV__ENSG00000174332|ENST00000628545|GLIS1;REV__GLIS1|p.H410Ifs*53|1|0.33|ENSG00000174332|chr1:53514755-53514755|G/-|frameshift_variant	51.33545320467046	0.2872990594074956	4				NaN	NaN	0	NaN	4956	2822	7778
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7781	22.827	NaN	23935	30	0	8030.5	0.106	+			5956	AVLKPGAWSRK	11	80	404.9114870087706	1211.712631626512	3	404.9117431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVLKPGAWSRK_	ENST00000308521.9_1_22:39436844-39436913:+|nuORF	58.62960593111931	0.3356877741313683	4				NaN	NaN	0	NaN	4957	2822	7778
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7782	22.829	NaN	15100	30	0	1607.3	0.106	+			1614	AGMALGIQK	9	67	452.7496017054101	903.4846504776202	2	452.7493591308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_AGM(Oxidation (M))ALGIQK_	ENSG00000174851|ENST00000376901|YIF1A	153.88471797397582	0.005963663451343155	4				NaN	NaN	0	NaN	4958	2822	7778
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7783	22.83	NaN	13936	30	0	2674.4	0.106			+	1210	AEQKLAEVD	9	65	501.7584443303668	1001.5023357275336	2	501.7586669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEQKLAEVD_	REV__COG7|p.R71H|1|0.38|ENSG00000168434|chr16:23445919-23445919|C/T|missense_variant;REV__ENSG00000168434|ENST00000307149|COG7	75.04331003522576	0.118981335847003	4				NaN	NaN	0	NaN	4959	2822	7778
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7784	22.832	NaN	7267.4	30	0	691.1	0.034			+	50580	YCPPPQRL	8	78	487.2504254962531	972.4862980593063	2	487.7520446777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YCPPPQRL_	REV__ENSG00000138073|ENST00000260643|PREB;REV__ENST00000468045.5_1_2:27354838-27356101:-|nuORF	26.79610172149135	0.7524337208463756	4				NaN	NaN	0	NaN	4960	2822	7778
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7785	22.833	NaN	7016.4	30	0	1589	0.141	+			9937	EQWDGVRVV	9	69	544.2796036838749	1086.5446544345498	2	544.2805786132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EQWDGVRVV_	tr|U7T4A5|U7T4A5_FUSNUBenzoyl-CoAreductase,subunitCOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00400PE=3SV=1	63.53385203322761	0.18415635464017938	4				NaN	NaN	0	NaN	4961	2822	7778
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7803	22.872	NaN	78531	30	0	16567	0.189	+			39091	SSSSVLINK	9	88	467.76325221059454	933.5119514879891	2	467.7635192871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSSSVLINK_	ENSG00000120278|ENST00000696526|PLEKHG1	195.06343300570734	5.420119182691198E-05	4				NaN	NaN	0	NaN	4976	2825	7802
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7804	22.875	NaN	70507	30	0	15583	0.106	+			17005	HPTDDTTTL	9	82	500.7320831585555	999.449613383911	2	500.7325439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HPTDDTTTL_	ENSG00000089327|ENST00000392219|FXYD5;ENST00000591716.6_1_19:35651643-35657154:+|nuORF;nc|ENSG00000089327|Q96DB9-2|FXYD5	102.7733458925114	0.03637199559902695	4				NaN	NaN	0	NaN	4977	2825	7802
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7805	22.877	NaN	28269	30	0	14380	0.106			+	10981	FEEINNEKL	9	69	379.19267905552266	1134.556207766768	3	379.1929016113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FEEINNEKL_	REV__tr|U7SLF7|U7SLF7_FUSNUAAA-ATPase-likedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01916PE=4SV=1	54.722347961057174	0.257609425301511	4				NaN	NaN	0	NaN	4978	2825	7802
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7806	22.879	NaN	35848	30	0	7464.9	0.106	+			34283	RTLDLTYRK	9	76	389.22752951742166	1164.660759152465	3	389.2276916503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RTLDLTYRK_	ENST00000369183.8_1_10:120095785-120095896:-|nuORF	97.59673978297657	0.04344766104981724	4				NaN	NaN	0	NaN	4979	2825	7802
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7807	22.881	NaN	15429	30	0	7886.6	0.106	+			32613	QYNPHVHQL	9	70	568.2851068752095	1134.555660817219	2	568.2859497070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QYNPHVHQL_	DLG5|p.F1661Ifs*9|1|0.12|ENSG00000151208|chr10:77805849-77805850|-/C|frameshift_variant;ENSG00000151208|ENST00000372391|DLG5;ENST00000459739.5_1_10:79567604-79581271:-|nuORF;ENST00000463362.5_1_10:79552200-79579794:-|nuORF;ENST00000475613.6_1_10:79552200-79579275:-|nuORF;nc|ENSG00000151208|Q8TDM6-2|DLG5;nc|ENSG00000151208|Q8TDM6-4|DLG5;nc|ENSG00000151208|Q8TDM6-5|DLG5	167.22876102047192	0.0032399547248545047	4				NaN	NaN	0	NaN	4980	2825	7802
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7808	22.883	NaN	16837	30	0	2203	0.106	+			36153	SEKVDRAVL	9	84	508.78966479872406	1015.5647766642481	2	508.79022216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SEKVDRAVL_	ENSG00000123240|ENST00000378747|OPTN;nc|ENSG00000123240|Q96CV9-2|OPTN;nc|ENSG00000123240|Q96CV9-3|OPTN	82.83050618871818	0.08530945204495013	4				NaN	NaN	0	NaN	4981	2825	7802
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7809	22.885	NaN	25696	30	0	3580.7	0.035	+			49374	VVSTVGMQR	9	90	488.7654147633606	975.5162765935212	2	488.7657470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VVSTVGMQR_	CON__P35900;ENSG00000171431|ENST00000167588|KRT20	104.0567914643314	0.03506238181059741	4				NaN	NaN	0	NaN	4982	2825	7802
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7827	22.921	NaN	37038	30	0	6237.5	0.214	+			23089	KVVDSLYNK	9	93	533.3001063351902	1064.5856597371803	2	533.3009033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVVDSLYNK_	ENSG00000108671|ENST00000261712|PSMD11;ENST00000585265.1_1_17:30807457-30807646:+|nuORF;nc|ENSG00000108671|O00231-2|PSMD11	190.2614974402762	0.00026591377982909756	4				NaN	NaN	0	NaN	4997	2828	7826
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7828	22.924	NaN	14857	30	0	1827.8	0.106				-1	 	0	69	546.7795042537576	1091.5444555743152	2	546.7805786132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4998	2828	7826
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7829	22.926	NaN	12674	30	0	1453.3	0.106	+			36077	SEKDHMVTM	9	81	539.2375268647178	1076.4605007962355	2	539.2391357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEKDHMVTM_	ENSG00000130826|ENST00000369550|DKC1;nc|ENSG00000130826|O60832-2|DKC1	95.81516180277367	0.04847050768394289	4				NaN	NaN	0	NaN	4999	2828	7826
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7830	22.928	NaN	12887	30	0	2175.8	0.106	+			19899	KEFDGKSL	8	79	462.2444950671022	922.4744372010044	2	462.2449645996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEFDGKSL_	ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;ENST00000517330.1_1_5:77337712-77337985:-|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P;nc|ENSG00000205940|Q58FF8|HSP90AB2P;nc|ENSG00000282100|Q58FF6|HSP90AB4P	117.81106730687013	0.23768492115495982	4				NaN	NaN	0	NaN	5000	2828	7826
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7831	22.93	NaN	6079.1	30	0	613.76	0.106	+			11429	FLTIVCMEE	9	76	550.7532340197926	1099.491915106385	2	550.7542114257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_FLTIVCM(Oxidation (M))EE_	ENSG00000216490|ENST00000407280|IFI30;ENST00000600463.1_1_19:18285864-18288180:+|nuORF	40.5726180659479	0.4135428067754104	4				NaN	NaN	0	NaN	5001	2828	7826
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7832	22.932	NaN	13030	30	0	3764.3	0.033				-1	 	0	65	435.24505308678516	868.4755532403703	2	435.2455139160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5002	2828	7826
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7833	22.932	NaN	14284	30	0	1965.5	0.14	+			5399	ATYGDTINR	9	78	505.74775949861186	1009.4809660640237	2	505.74859619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATYGDTINR_	ENSG00000071189|ENST00000428135|SNX13;nc|ENSG00000071189|Q9Y5W8|SNX13;SNX13|p.E913Qfs*13|1|0.04|ENSG00000071189|chr7:17794182-17794183|-/TTTG|frameshift_variant;SNX13|p.F895Lfs*9|1|0.23|ENSG00000071189|chr7:17794234-17794234|A/-|frameshift_variant;SNX13|p.F911Wfs*5|1|0.02|ENSG00000071189|chr7:17794184-17794187|AAGA/-|frameshift_variant	120.8684288430529	0.02067403653475984	4				NaN	NaN	0	NaN	5003	2828	7826
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7851	22.971	NaN	32195	30	0	14378	0.214	+			42597	TATATNHVL	9	77	464.2477592489352	926.4809655646704	2	464.2480163574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TATATNHVL_	ENSG00000004700|ENST00000444129|RECQL	95.81516180277367	0.04847050768394289	4				NaN	NaN	0	NaN	5018	2831	7850
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7852	22.975	NaN	25944	30	0	14814	0.106	+			32328	QTTEFGIHK	9	79	530.7745949456042	1059.5346369580084	2	530.7747802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QTTEFGIHK_	ENSG00000156675|ENST00000330843|RAB11FIP1;ENST00000522774.1_1_8:37728794-37730726:-|nuORF;ENST00000523182.5_1_8:37720415-37730726:-|nuORF;nc|ENSG00000156675|Q6WKZ4-1|RAB11FIP1	102.0615471778698	0.03709830720253279	4				NaN	NaN	0	NaN	5019	2831	7850
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7853	22.977	NaN	47750	30	0	6455.5	0.106	+			4880	ATQCGSLIGK	10	91	517.7679195075347	1033.5212860818692	2	517.7684936523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_ATQC(Carbamidomethyl (C))GSLIGK_	ENSG00000169564|ENST00000303577|PCBP1	145.46060221211434	0.009301538339246195	4				NaN	NaN	0	NaN	5020	2831	7850
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7854	22.978	NaN	11896	30	0	2705.4	0.106	+			12342	GDKGRLCLQK	10	78	373.2093743519648	1116.6062936560945	3	373.2099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GDKGRLCLQK_	AluSc_dup13832|chr7:33006087-33006413:-|3.3176111198493|0.4159080058002372|3.0|482.0|7|2|sense	40.05817265558897	0.5486090488315611	4				NaN	NaN	0	NaN	5021	2831	7850
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7855	22.98	NaN	30873	30	0	10587	0.106				-1	 	0	65	346.5532291893304	1036.6378581681913	3	346.5535888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5022	2831	7850
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7856	22.982	NaN	12791	30	0	5523	0.036	+			10357	ETVLELEVE	9	60	354.18494920668314	1059.5330182202495	3	354.1854553222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ETVLELEVE_	DLEC1|p.N951Mfs*67|1|0.31|ENSG00000008226|chr3:38100410-38100410|A/-|frameshift_variant;DLEC1|p.Y1310Mfs*121|1|0.59|ENSG00000008226|chr3:38116521-38116521|T/-|frameshift_variant;ENSG00000008226|ENST00000308059|DLEC1;nc|ENSG00000008226|Q9Y238-3|DLEC1	25.57405402267927	0.5642445186134241	4				NaN	NaN	0	NaN	5023	2831	7850
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7857	22.983	NaN	13973	30	0	7936.2	0.138			+	30282	PTGQKAQAP	9	69	449.24295716894414	896.4713614046883	2	449.2427978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PTGQKAQAP_	REV__ENSG00000161010|ENST00000292586|MRNIP;REV__nc|ENSG00000161010|Q6NTE8-3|MRNIP	68.78682469695295	0.14603441672067394	4				NaN	NaN	0	NaN	5024	2831	7850
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7875	23.022	NaN	209500	30	0	24127	0.195	+			50709	YEEVARKL	8	108	504.2795261255881	1006.5444993179763	2	504.2799072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YEEVARKL_	CON__Q3SX28;ENSG00000140416|ENST00000403994|TPM1;ENSG00000143549|ENST00000651641|TPM3;ENSG00000167460|ENST00000643579|TPM4;ENSG00000198467|ENST00000645482|TPM2;ENST00000391998.3_1_19:53982901-53983033:+|nuORF;ENST00000469717.5_1_1:154145382-154155531:-|nuORF;ENST00000471212.5_1_9:35684790-35689844:-|nuORF;ENST00000473036.2_1_1:154145382-154155604:-|nuORF;ENST00000558868.5_1_15:63340774-63353139:+|nuORF;ENST00000560975.5_1_15:63335715-63353895:+|nuORF;ENST00000587201.5_1_19:16187360-16198908:+|nuORF;ENST00000604975.1_1_9:35685264-35689844:-|nuORF;nc|ENSG00000140416|P09493-10|TPM1;nc|ENSG00000140416|P09493-2|TPM1;nc|ENSG00000140416|P09493-3|TPM1;nc|ENSG00000140416|P09493-4|TPM1;nc|ENSG00000140416|P09493-5|TPM1;nc|ENSG00000140416|P09493-6|TPM1;nc|ENSG00000140416|P09493-7|TPM1;nc|ENSG00000140416|P09493-8|TPM1;nc|ENSG00000140416|P09493-9|TPM1;nc|ENSG00000143549|P06753-2|TPM3;nc|ENSG00000143549|P06753-3|TPM3;nc|ENSG00000143549|P06753-4|TPM3;nc|ENSG00000143549|P06753-5|TPM3;nc|ENSG00000143549|P06753-6|TPM3;nc|ENSG00000143549|P06753-7|TPM3;nc|ENSG00000167460|P67936-2|TPM4;nc|ENSG00000198467|P07951-2|TPM2;nc|ENSG00000198467|P07951-3|TPM2;TPM1|p.R160C|1|0.32|ENSG00000140416|chr15:63059666-63059666|C/T|missense_variant	90.36981228632155	0.27635063874291205	4				NaN	NaN	0	NaN	5039	2834	7874
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7876	23.025	NaN	32792	30	0	7618.7	0.106	+			20208	KELGLQVPA	9	90	477.7841580950118	953.5537632568236	2	477.78436279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KELGLQVPA_	AluSx1_dup108546|chr19:48960184-48960360:-|1.1583690759143794|0.0026454172374457|8.77|474.0|10|1|anti-sense	79.45101966838831	0.09992237243120712	4				NaN	NaN	0	NaN	5040	2834	7874
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7877	23.027	NaN	42052	30	0	22119	0.106	+			33266	RGGGGRRLLQ	10	57	357.21643890708503	1068.6274873214552	3	357.2169494628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RGGGGRRLLQ_	ENST00000460939.5_1_11:62369776-62370417:-|nuORF	16.006774744331256	0.7351120747673535	4				NaN	NaN	0	NaN	5041	2834	7874
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7878	23.029	NaN	13348	30	0	9561.4	0.106				-1	 	0	52	323.200993106905	644.38743328061	2	323.201416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5042	2834	7874
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7879	23.031	NaN	10446	30	0	1551.5	0.106			+	37702	SLSPATITAG	10	69	459.2497935748572	916.4850342165145	2	459.2501220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SLSPATITAG_	REV__CTNNB1|p.T41I|1|0.48|ENSG00000168036|chr3:41224634-41224634|C/T|missense_variant	58.78195531508484	0.37691818691852547	4				NaN	NaN	0	NaN	5043	2834	7874
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7880	23.033	NaN	9468.7	30	0	2865.2	0.106	+			4363	ATGSVFTGK	9	74	434.23169157903334	866.4488302248667	2	434.23187255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATGSVFTGK_	ENSG00000126790|ENST00000247194|L3HYPDH	150.36159442982594	0.006784847064083231	4				NaN	NaN	0	NaN	5044	2834	7874
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7881	23.034	NaN	9134.9	30	0	1334.9	0.037	+			11526	FPEEDKKTY	9	82	578.7791549915748	1155.5437570499496	2	578.7799682617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FPEEDKKTY_	ENSG00000151366|ENST00000281031|NDUFC2;nc|ENSG00000151366|O95298-2|NDUFC2	129.42129120953632	0.01549634589885217	4				NaN	NaN	0	NaN	5045	2834	7874
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7899	23.071	NaN	91499	30	0	35191	0.212	+			39477	STFDTQITKK	10	95	390.21171934770234	1167.613328643307	3	390.2119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STFDTQITKK_	ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC;PRKDC|p.D2437Wfs*3|1|0.11|ENSG00000253729|chr8:47840161-47840162|-/CA|frameshift_variant;PRKDC|p.K3681Nfs*6|1|0.32|ENSG00000253729|chr8:47785174-47785177|TTCT/-|frameshift_variant;PRKDC|p.M3670*|1|0.5|ENSG00000253729|chr8:47785212-47785212|T/-|frameshift_variant;PRKDC|p.M3846Cfs*12|1|0.13|ENSG00000253729|chr8:47779047-47779047|T/-|frameshift_variant;PRKDC|p.M4020Cfs*2|1|0.31|ENSG00000253729|chr8:47776968-47776968|T/-|frameshift_variant;PRKDC|p.N3605Kfs*3|1|0.22|ENSG00000253729|chr8:47788993-47788994|-/T|frameshift_variant;PRKDC|p.N4037Ifs*15|1|0.17|ENSG00000253729|chr8:47776916-47776916|T/-|frameshift_variant;PRKDC|p.R2704Gfs*13|2|0.34|ENSG00000253729|chr8:47834238-47834238|T/-|frameshift_variant;PRKDC|p.S3402Ifs*16|1|0.04|ENSG00000253729|chr8:47799302-47799303|-/AAACCGTGAGTTAGAGGAGGTAA|frameshift_variant;PRKDC|p.S4099Qfs*6|1|0.25|ENSG00000253729|chr8:47774265-47774265|A/-|frameshift_variant;PRKDC|p.T3268Pfs*7|1|0.5|ENSG00000253729|chr8:47803426-47803426|T/-|frameshift_variant;PRKDC|p.W3401Cfs*4|1|0.01|ENSG00000253729|chr8:47799304-47799305|-/AATGAATA|frameshift_variant	86.88156770896713	0.14892753630261096	4				NaN	NaN	0	NaN	5060	2837	7898
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7900	23.075	NaN	56024	30	0	6651.6	0.106	+			24496	LGHQYLVEK	9	127	362.86912730248423	1085.5855525076527	3	362.8697204589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LGHQYLVEK_	tr|U7T8F8|U7T8F8_FUSNU[Citrate[pro-3S]-lyase]ligaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00040PE=4SV=1	87.75429964447693	0.0711966946989736	4				NaN	NaN	0	NaN	5061	2837	7898
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7901	23.077	NaN	46136	30	0	15329	0.106	+			26693	LVHQVFSEK	9	83	543.800214317644	1085.5858757020878	2	543.8014526367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LVHQVFSEK_	ENSG00000170324|ENST00000374201|FRMPD2;FRMPD2|p.K602Sfs*61|1|0.27|ENSG00000170324|chr10:48201377-48201377|T/-|frameshift_variant;FRMPD2|p.N579Tfs*84|1|0.32|ENSG00000170324|chr10:48206809-48206809|T/-|frameshift_variant;nc|ENSG00000170324|Q68DX3-2|FRMPD2	101.60071028292904	0.0375685401170269	4				NaN	NaN	0	NaN	5062	2837	7898
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7902	23.079	NaN	21941	30	0	3300.2	0.106	+			12690	GEKGPVKVL	9	79	463.78646146069224	925.5583699881845	2	463.7871398925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEKGPVKVL_	ENSG00000141232|ENST00000499247|TOB1;TOB1|p.F274Yfs*52|1|0.06|ENSG00000141232|chr17:50863197-50863198|-/CATGCAGT|frameshift_variant	82.7504851949679	0.08565546331141553	4				NaN	NaN	0	NaN	5063	2837	7898
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7903	23.081	NaN	24845	30	0	4368.3	0.106	+			46648	VGDPGQRTL	9	71	471.75334722990016	941.4921415266003	2	471.75384521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VGDPGQRTL_	ARID1A|p.F2141Sfs*59|5|0.26|ENSG00000117713|chr1:26780313-26780313|C/-|frameshift_variant;ARID1A|p.P2114Rfs*21|1|0.46|ENSG00000117713|chr1:26780236-26780236|C/-|frameshift_variant;ARID1A|p.V2244Gfs*34|1|0.31|ENSG00000117713|chr1:26780626-26780627|-/G|frameshift_variant;ENSG00000117713|ENST00000324856|ARID1A;nc|ENSG00000117713|O14497-2|ARID1A;nc|ENSG00000117713|O14497-3|ARID1A	74.1650062923329	0.12277912660386392	4				NaN	NaN	0	NaN	5064	2837	7898
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7904	23.082	NaN	28065	30	0	5094.9	0.033	+			30336	PTSPLVRK	8	85	449.2790378419018	896.5435227506036	2	449.2795715332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PTSPLVRK_	ENST00000430335.1_3_22:38699202-38712683:-|nuORF	51.33545320467046	0.5859736979383976	4				NaN	NaN	0	NaN	5065	2837	7898
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7905	23.083	NaN	6223.9	30	0	1136.5	0.139			+	48460	VTLKLAGLR	9	73	485.823644346311	969.6327357594221	2	485.82415771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VTLKLAGLR_	REV__nc|ENSG00000170234|Q96N64-2|PWWP2A	71.87747018426188	0.13267044672804276	4				NaN	NaN	0	NaN	5066	2837	7898
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7923	23.122	NaN	71845	30	0	8094.3	0.215				-1	 	0	88	490.7388517101345	979.463150487069	2	490.73919677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5081	2840	7922
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7924	23.125	NaN	26687	30	0	3116.4	0.106			+	-1	MLGPLCLSL	9	85	510.2662806197113	1018.5180083062227	2	510.26678466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))LGPLC(Carbamidomethyl (C))LSL_	REV__ENST00000472820.1_1_9:139568206-139571631:-|nuORF	47.91560031466742	0.327412564698279	4				NaN	NaN	0	NaN	5082	2840	7922
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7925	23.127	NaN	42251	30	0	7616.2	0.106				-1	 	0	90	448.24723769043806	894.4799224476761	2	448.24755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5083	2840	7922
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7926	23.129	NaN	36502	30	0	9411.6	0.106			+	32908	RDTSARSR	8	95	474.75277237234553	947.4909918114911	2	474.7530212402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RDTSARSR_	REV__ENST00000309352.3_1_17:73901088-73901211:-|nuORF	68.78682469695295	0.41700713582915416	4				NaN	NaN	0	NaN	5084	2840	7922
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7927	23.131	NaN	25901	30	0	13855	0.106				-1	 	0	65	425.7239728858057	849.4333928384115	2	425.7242736816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5085	2840	7922
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7928	23.133	NaN	10151	30	0	3849.3	0.034	+			14240	GSSSSTFIK	9	65	457.2344779978152	912.4544030624304	2	457.234619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GSSSSTFIK_	ENSG00000134853|ENST00000257290|PDGFRA	62.107414245175825	0.1960472003779324	4				NaN	NaN	0	NaN	5086	2840	7922
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7929	23.133	NaN	7905.2	30	0	2071.4	0.139			+	46405	VENKLDVL	8	83	465.26767890258486	928.5208048719697	2	465.2684020996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VENKLDVL_	REV__ENSG00000164306|ENST00000314970|PRIMPOL;REV__nc|ENSG00000164306|Q96LW4-2|PRIMPOL;REV__PRIMPOL|p.L523*|1|0.1|ENSG00000164306|chr4:184694659-184694659|T/-|frameshift_variant	71.29570347882199	0.39610197767395533	4				NaN	NaN	0	NaN	5087	2840	7922
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7947	23.173	NaN	82468	30	0	12482	0.189	+			28771	NPEHASVAM	9	90	478.21791575265416	954.4212785721083	2	478.2182922363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NPEHASVAM_	ENSG00000102317|ENST00000376759|RBM3;ENST00000466764.5_1_X:48433568-48434262:+|nuORF;ENST00000488216.5_1_X:48433568-48434199:+|nuORF;ENST00000491240.5_1_X:48433911-48434199:+|nuORF	93.19546047674547	0.05585629608842056	4				NaN	NaN	0	NaN	5102	2843	7946
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7948	23.176	NaN	22803	30	0	5575.2	0.106	+			36014	SEIERQAQV	9	85	530.275307987713	NaN	0	530.2753295898438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEIERQAQV_	ENSG00000149182|ENST00000524782|ARFGAP2;ENST00000395449.7_1_11:47187835-47198404:-|nuORF;nc|ENSG00000149182|Q8N6H7-2|ARFGAP2	145.15565482312357	0.0012548246736834398	4				NaN	NaN	0	NaN	5103	2843	7946
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7949	23.178	NaN	20231	30	0	3527.9	0.106	+			347	AAQDSTDLVAK	11	79	559.7874867176848	1117.5604205021696	2	559.788330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AAQDSTDLVAK_	ENSG00000120438|ENST00000321394|TCP1;ENST00000546204.1_1_6:160200657-160201127:-|nuORF	115.91470973250675	0.028033986879349545	4				NaN	NaN	0	NaN	5104	2843	7946
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7950	23.18	NaN	6361.5	30	0	1630.4	0.106	+			1643	AGPKSMEV	8	56	409.70687476661317	817.3991966000264	2	409.7073974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AGPKSMEV_	ENSG00000104419|ENST00000323851|NDRG1;ENST00000519278.5_1_8:134251123-134266883:-|nuORF;nc|ENSG00000104419|Q92597-2|NDRG1;nc|ENSG00000104419|Q92597-3|NDRG1	53.351449002276354	0.5676011784961348	4				NaN	NaN	0	NaN	5105	2843	7946
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7951	23.182	NaN	20558	30	0	1427.8	0.106			+	32558	QVVGVRVKD	9	83	500.3004681258212	998.5863833184425	2	500.30078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QVVGVRVKD_	REV__ENSG00000172752|ENST00000373157|COL6A5;REV__nc|ENSG00000172752|A8TX70-2|COL6A5;REV__nc|ENSG00000172752|A8TX70|COL6A5	56.72105179125745	0.24094814563026265	4				NaN	NaN	0	NaN	5106	2843	7946
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7952	23.183	NaN	4211.7	30	0	1547.3	0.106	+			21553	KNVKAEIPLN	10	67	563.3340967941772	1124.6536406551543	2	563.3350219726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KNVKAEIPLN_	ENSG00000143970|ENST00000435504|ASXL2;nc|ENSG00000143970|Q76L83-2|ASXL2	61.76455937419982	0.3497917639301274	4				NaN	NaN	0	NaN	5107	2843	7946
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7953	23.185	NaN	9958	30	0	1571.9	0.035	+			20080	KEKGSTLDL	9	74	495.7763898668479	989.5382268004959	2	495.7767639160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KEKGSTLDL_	ENSG00000099194|ENST00000370355|SCD	70.8162118820467	0.13725933411854815	4				NaN	NaN	0	NaN	5108	2843	7946
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7971	23.223	NaN	1087900	30	0	222840	0.097			+	24996	LLEQELHLL	9	113	369.88463504027766	1106.632075721033	3	369.88531494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LLEQELHLL_	REV__ENST00000356136.7_2_11:75854004-75854214:+|nuORF	74.25504064058377	0.12238981753128622	4				NaN	NaN	0	NaN	5123	2846	7970
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7972	23.224	NaN	364630	30	0	66708	0.106				-1	 	0	103	554.3233990177388	1106.6322451022775	2	554.3243408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5124	2846	7970
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7973	23.226	NaN	115270	30	0	15297	0.106				-1	 	0	131	374.56873382333504	1120.6843720702052	3	374.5690002441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5125	2846	7970
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7974	23.228	NaN	69708	30	0	9634.5	0.106				-1	 	0	94	535.7789702303323	1069.5433875274646	2	535.7798461914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5126	2846	7970
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7975	23.23	NaN	56227	30	0	8320.3	0.106	+			12921	GESHVSGTTTL	11	95	544.7638169384195	1087.513080943639	2	544.7655029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GESHVSGTTTL_	ENSG00000124422|ENST00000261497|USP22;ENST00000478443.1_1_17:20910195-20914666:-|nuORF;nc|ENSG00000124422|Q9UPT9-2|USP22	104.0567914643314	0.05230027148140989	4				NaN	NaN	0	NaN	5127	2846	7970
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7976	23.232	NaN	24761	30	0	4014.5	0.106	+			35031	SADDRCKVL	9	85	503.75167455602923	1005.4887961788585	2	503.7530212402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SADDRCKVL_	ENSG00000111605|ENST00000435070|CPSF6;nc|ENSG00000111605|Q16630-2|CPSF6;nc|ENSG00000111605|Q16630-3|CPSF6	56.43379154798735	0.2433427591689151	4				NaN	NaN	0	NaN	5128	2846	7970
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7977	23.234	NaN	6109.4	30	0	830.12	0.038	+			19471	KASSEMALYQK	11	80	628.3198313954708	1254.6251098577416	2	628.3212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KASSEMALYQK_	ENSG00000155463|ENST00000612549|OXA1L;ENST00000473744.5_1_14:23235910-23239613:+|nuORF;ENST00000481218.1_1_14:23236498-23239613:+|nuORF;ENST00000495424.5_1_14:23235916-23239613:+|nuORF;nc|ENSG00000155463|Q15070-2|OXA1L;nc|ENSG00000155463|Q15070-3|OXA1L;OXA1L|p.N431Mfs*4|1|0.29|ENSG00000155463|chr14:22771273-22771273|A/-|frameshift_variant	128.3478880297481	0.0041339947484058445	4				NaN	NaN	0	NaN	5129	2846	7970
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7978	23.234	NaN	7253.4	30	0	699	0.145				-1	QAHCGRRLT	9	68	366.8577448298736	NaN	0	366.85772705078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Carbamidomethyl (C)	_QAHC(Carbamidomethyl (C))GRRLT_	ENST00000436100.1_1_10:101874528-101874642:-|nuORF	24.519189625965996	0.35377483217337163	4				NaN	NaN	0	NaN	5130	2846	7970
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7996	23.272	NaN	25513	30	0	11438	0.214	+			9399	EKFDKSKL	8	87	497.7812644012652	993.5479758693305	2	497.7819519042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EKFDKSKL_	ENSG00000154620|ENST00000284856|TMSB4Y;ENSG00000205542|ENST00000451311|TMSB4X;ENST00000323496.5_1_9:131104444-131104642:+|nuORF	90.60085204095205	0.2756512185673585	4				NaN	NaN	0	NaN	5145	2849	7995
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7997	23.276	NaN	11538	30	0	1375.6	0.106	+			12561	GEGKPTPAL	9	74	435.23929655756683	868.4640401819337	2	435.2392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEGKPTPAL_	ENSG00000132305|ENST00000410111|IMMT;ENST00000409258.2_1_2:86386442-86398424:-|nuORF;ENST00000474969.5_1_2:86385703-86422514:-|nuORF;nc|ENSG00000132305|Q16891-2|IMMT;nc|ENSG00000132305|Q16891-3|IMMT;nc|ENSG00000132305|Q16891-4|IMMT	118.74307786436346	0.02196067127630568	4				NaN	NaN	0	NaN	5146	2849	7995
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7998	23.278	NaN	5411.2	30	0	1075.5	0.106	+			10818	FANGHVNSV	9	67	472.73154238234326	943.4485318314865	2	472.7315368652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FANGHVNSV_	BAZ1A|p.E200Nfs*25|1|0.39|ENSG00000198604|chr14:34810976-34810976|T/-|frameshift_variant;BAZ1A|p.E440Gfs*4|1|0.21|ENSG00000198604|chr14:34794793-34794794|-/C|frameshift_variant;BAZ1A|p.F1348Hfs*8|1|0.02|ENSG00000198604|chr14:34761959-34761960|-/CAAGTGA|frameshift_variant;BAZ1A|p.F476Sfs*3|1|0.51|ENSG00000198604|chr14:34792858-34792858|A/-|frameshift_variant;BAZ1A|p.I355Nfs*3|1|0.16|ENSG00000198604|chr14:34800288-34800289|-/T|frameshift_variant;BAZ1A|p.L1455*|1|0.27|ENSG00000198604|chr14:34758726-34758726|A/-|frameshift_variant;BAZ1A|p.M682*|1|0.4|ENSG00000198604|chr14:34783186-34783186|T/-|frameshift_variant;BAZ1A|p.R1409Kfs*11|1|0.36|ENSG00000198604|chr14:34761774-34761774|C/-|frameshift_variant;BAZ1A|p.S944Qfs*34|1|0.38|ENSG00000198604|chr14:34775922-34775922|A/-|frameshift_variant;ENSG00000198604|ENST00000360310|BAZ1A;nc|ENSG00000198604|Q9NRL2-2|BAZ1A	115.49404669440601	0.023927554121326553	4				NaN	NaN	0	NaN	5147	2849	7995
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7999	23.28	NaN	9375.6	30	0	5152.7	0.106	+			2177	ALMGYATHK	9	51	331.1719362230517	990.4939792693551	3	331.17254638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ALMGYATHK_	ENSG00000126709|ENST00000361157|IFI6;nc|ENSG00000126709|P09912-2|IFI6;nc|ENSG00000126709|P09912-3|IFI6	42.396135135203025	0.392153681582562	4				NaN	NaN	0	NaN	5148	2849	7995
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8000	23.281	NaN	10178	30	0	961.92	0.106			+	11314	FKVVGKSEA	9	84	482.7758311331602	963.5371093331204	2	482.7760009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FKVVGKSEA_	REV__ENSG00000064651|ENST00000262461|SLC12A2;REV__nc|ENSG00000064651|P55011-3|SLC12A2;REV__SLC12A2|p.E1119Rfs*7|1|0.47|ENSG00000064651|chr5:128184417-128184418|-/A|frameshift_variant;REV__SLC12A2|p.F466Lfs*59|1|0.11|ENSG00000064651|chr5:128135793-128135793|T/-|frameshift_variant;REV__SLC12A2|p.P1171Sfs*18|1|0.38|ENSG00000064651|chr5:128186498-128186499|-/TC|frameshift_variant	66.42927471994793	0.16001998865088202	4				NaN	NaN	0	NaN	5149	2849	7995
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8001	23.283	NaN	4868.2	30	0	768.03	0.037	+			9503	EKTVLNSEVL	10	71	566.316719203506	NaN	0	566.3158569335938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EKTVLNSEVL_	ENSG00000187164|ENST00000355371|SHTN1;nc|ENSG00000187164|A0MZ66-2|SHTN1;nc|ENSG00000187164|A0MZ66-3|SHTN1;nc|ENSG00000187164|A0MZ66-4|SHTN1;nc|ENSG00000187164|A0MZ66-5|SHTN1;nc|ENSG00000187164|A0MZ66-6|SHTN1;nc|ENSG00000187164|A0MZ66-8|SHTN1	85.16082228582465	0.07406536248925066	4				NaN	NaN	0	NaN	5150	2849	7995
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8002	23.284	NaN	13757	30	0	2813.3	0.14	+			40151	STQNGPVFAK	10	84	524.777070516591	NaN	0	524.7776489257812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STQNGPVFAK_	ENSG00000099942|ENST00000354336|CRKL	123.20810148215591	0.017570947977374466	4				NaN	NaN	0	NaN	5151	2849	7995
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8020	23.323	NaN	191910	30	0	70847	0.169				-1	 	0	75	458.77616011419366	915.5377672951873	2	458.7763977050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5166	2852	8019
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8021	23.325	NaN	18737	30	0	2101.4	0.106	+			50674	YEEEVKKTL	9	82	569.8020506780173	1137.5895484228345	2	569.8032836914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YEEEVKKTL_	ECHDC1|p.N109Ifs*9|1|0.19|ENSG00000093144|chr6:127327057-127327057|T/-|frameshift_variant;ECHDC1|p.N222Mfs*3|1|0.46|ENSG00000093144|chr6:127290128-127290128|T/-|frameshift_variant;ENSG00000093144|ENST00000454859|ECHDC1;ENST00000368287.1_1_6:127648134-127664493:-|nuORF;nc|ENSG00000093144|Q9NTX5-5|ECHDC1;nc|ENSG00000093144|Q9NTX5-6|ECHDC1;nc|ENSG00000093144|Q9NTX5|ECHDC1	152.06079943815163	0.00638878961959199	4				NaN	NaN	0	NaN	5167	2852	8019
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8022	23.327	NaN	17489	30	0	1658.8	0.106	+			19753	KDVNQQEF	8	83	504.2430151637516	1006.4714773943032	2	504.2433166503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KDVNQQEF_	ENSG00000105372|ENST00000598742|RPS19	80.45461616416974	0.3197856089436126	4				NaN	NaN	0	NaN	5168	2852	8019
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8023	23.329	NaN	8723.6	30	0	2166.5	0.106	+			16229	HEDPGQATL	9	65	484.22702872019966	966.4395045071993	2	484.2273864746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HEDPGQATL_	ENSG00000124177|ENST00000373233|CHD6;ENST00000480022.1_1_20:40033235-40042188:-|nuORF	69.6276240434122	0.14239879520340665	4				NaN	NaN	0	NaN	5169	2852	8019
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8024	23.331	NaN	5405.2	30	0	370.53	0.106	+			28883	NQERELKA	8	66	494.26461919174886	NaN	0	494.2645263671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NQERELKA_	tr|U7SPW7|U7SPW7_FUSNUChemotaxisproteinMotBOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01670PE=4SV=1	37.81151784470057	1.7418937515398478	4				NaN	NaN	0	NaN	5170	2852	8019
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8025	23.333	NaN	4951.8	30	0	1071.6	0.106			+	35212	SAKSIFNKL	9	56	336.5342518593517	NaN	0	336.5342712402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SAKSIFNKL_	REV__ENSG00000136161|ENST00000344532|RCBTB2;REV__nc|ENSG00000136161|O95199-2|RCBTB2	24.20275056022122	0.35506675290109213	4				NaN	NaN	0	NaN	5171	2852	8019
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8026	23.335	NaN	7475.1	30	0	1010.5	0.033	+			12404	GEAGITRSV	9	67	445.2398603284411	888.4651677236823	2	445.2402648925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GEAGITRSV_	ENSG00000105939|ENST00000242351|ZC3HAV1;nc|ENSG00000105939|Q7Z2W4-2|ZC3HAV1;nc|ENSG00000105939|Q7Z2W4-3|ZC3HAV1;ZC3HAV1|p.F145Lfs*49|2|0.2|ENSG00000105939|chr7:139089633-139089633|A/-|frameshift_variant	93.5975768576971	0.05472259948179787	4				NaN	NaN	0	NaN	5172	2852	8019
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8044	23.372	NaN	83147	30	0	7831.8	0.214			+	44433	TSLTDWLKH	9	110	550.7908605257961	1099.5671681183921	2	550.7923583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSLTDWLKH_	REV__ENST00000551046.5_1_14:105452161-105455990:+|nuORF	111.64827973302667	0.027316110422332632	4				NaN	NaN	0	NaN	5187	2855	8043
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8045	23.375	NaN	20558	30	0	3289.4	0.106			+	30754	QDNKQPKL	8	78	485.7687193488082	969.5228857644164	2	485.7691345214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QDNKQPKL_	REV__ENSG00000166436|ENST00000646038|TRIM66;REV__nc|ENSG00000166436|O15016-2|TRIM66;REV__nc|ENSG00000166436|O15016|TRIM66;REV__TRIM66|p.P964Qfs*4|1|0.37|ENSG00000166436|chr11:8621158-8621158|G/-|frameshift_variant	108.08749611321984	0.24621691167378246	4				NaN	NaN	0	NaN	5188	2855	8043
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8046	23.377	NaN	8303.6	30	0	697.32	0.106			+	1359	AEVEKLKKA	9	80	508.31037507034154	1014.6061972074831	2	508.3108825683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEVEKLKKA_	REV__ENSG00000100266|ENST00000263246|PACSIN2;REV__nc|ENSG00000100266|Q9UNF0-2|PACSIN2	77.53327743719008	0.1082147015697554	4				NaN	NaN	0	NaN	5189	2855	8043
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8047	23.379	NaN	9525.8	30	0	628.93	0.106			+	-1	LMVGRYLD	8	78	491.75481611788234	NaN	0	491.7548828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_LM(Oxidation (M))VGRYLD_	REV__ZNF404|p.D33G|1|0.42|ENSG00000176222|chr19:43880048-43880048|T/C|missense_variant	68.484700416344	1.7418937515398478	4				NaN	NaN	0	NaN	5190	2855	8043
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8048	23.381	NaN	7107.4	30	0	387.97	0.106			+	-1	AGDGVLVCKVG	11	77	537.783550086384	1073.552547239568	2	537.7831420898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_AGDGVLVC(Carbamidomethyl (C))KVG_	REV__ENSG00000116574|ENST00000366691|RHOU	44.377184641726394	0.49804979881800077	4				NaN	NaN	0	NaN	5191	2855	8043
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8049	23.383	NaN	46565	30	0	5295.3	0.036	+			49394	VVTEHLINK	9	106	526.808562314109	1051.602571695018	2	526.8087768554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VVTEHLINK_	ENSG00000036257|ENST00000264414|CUL3;nc|ENSG00000036257|Q13618-2|CUL3	120.30596017624542	0.02101454110788768	4				NaN	NaN	0	NaN	5192	2855	8043
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8050	23.383	NaN	5685.3	30	0	429.65	0.14			+	25628	LQQIPTSEN	9	69	515.2641941896482	NaN	0	515.2643432617188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LQQIPTSEN_	REV__ENSG00000028310|ENST00000467963|BRD9;REV__ENST00000466684.5_1_5:879980-889814:-|nuORF;REV__ENST00000483173.5_3_5:889166-892639:-|nuORF;REV__ENST00000490814.6_1_5:888486-889814:-|nuORF;REV__ENST00000495265.5_1_5:864585-889814:-|nuORF;REV__ENST00000495794.5_1_5:883971-889814:-|nuORF;REV__nc|ENSG00000028310|Q9H8M2-1|BRD9;REV__nc|ENSG00000028310|Q9H8M2-3|BRD9;REV__nc|ENSG00000028310|Q9H8M2-4|BRD9	34.172542307311794	0.30503706118289736	4				NaN	NaN	0	NaN	5193	2855	8043
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8068	23.422	NaN	103570	30	0	46336	0.185				-1	QTALPCQILG	10	80	367.5298898599351	1099.5678401800053	3	367.53045654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_QTALPC(Carbamidomethyl (C))QILG_	ENSG00000178764|ENST00000314393|ZHX2;ZHX2|p.K736Sfs*11|1|0.35|ENSG00000178764|chr8:122953713-122953713|A/-|frameshift_variant;ZHX2|p.M716Wfs*31|1|0.71|ENSG00000178764|chr8:122953653-122953653|C/-|frameshift_variant;ZHX2|p.Q413Pfs*31|1|0.32|ENSG00000178764|chr8:122952743-122952744|-/C|frameshift_variant;ZHX2|p.Q531Rfs*19|1|0.33|ENSG00000178764|chr8:122953096-122953096|C/-|frameshift_variant;ZHX2|p.T685Rfs*4|1|0.18|ENSG00000178764|chr8:122953560-122953560|A/-|frameshift_variant	33.921630207806714	0.6028135429846169	4				NaN	NaN	0	NaN	5208	2858	8067
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8069	23.426	NaN	101320	30	0	18011	0.106	+			4625	ATLNVSTTR	9	94	481.76611567691555	961.5176784206311	2	481.7665710449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATLNVSTTR_	ENSG00000088448|ENST00000267339|ANKRD10;ENST00000460846.1_1_13:111557570-111567134:-|nuORF;nc|ENSG00000088448|Q9NXR5-2|ANKRD10	174.8648734531126	0.001936507438084573	4				NaN	NaN	0	NaN	5209	2858	8067
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8070	23.428	NaN	103370	30	0	9899.3	0.106	+			8849	EENSHLTSV	9	103	508.2375981451621	1014.4606433571242	2	508.23809814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EENSHLTSV_	ENSG00000157557|ENST00000360938|ETS2	180.92599232761785	0.0012030822705978085	4				NaN	NaN	0	NaN	5210	2858	8067
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8071	23.429	NaN	15754	30	0	6924.4	0.106	+			49128	VVLSPKQGQP	10	62	351.54090294506096	1051.600879435383	3	351.5413513183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVLSPKQGQP_	ENSG00000118407|ENST00000237172|FILIP1;nc|ENSG00000118407|Q7Z7B0-2|FILIP1;nc|ENSG00000118407|Q7Z7B0-3|FILIP1	33.921630207806714	0.6028135429846169	4				NaN	NaN	0	NaN	5211	2858	8067
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8072	23.431	NaN	20907	30	0	12091	0.106	+			332	AAPTPGRAL	9	61	427.24755947600585	852.4805660188117	2	427.2479553222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AAPTPGRAL_	ENSG00000174705|ENST00000311601|SH3PXD2B;SH3PXD2B|p.G814Afs*37|1|0.38|ENSG00000174705|chr5:172338664-172338664|C/-|frameshift_variant	47.657333605630114	0.33044192980041115	4				NaN	NaN	0	NaN	5212	2858	8067
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8073	23.433	NaN	7482.8	30	0	1658.5	0.106				-1	ALVAGLSAHMP	11	66	361.52661886465273	NaN	0	361.5267639160156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_ALVAGLSAHM(Oxidation (M))P_	tr|U7SNL5|U7SNL5_FUSNUNa+/H+antiporterNhaC-likeC-terminaldomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01803PE=4SV=1	31.634271133179894	0.4244354679066847	4				NaN	NaN	0	NaN	5213	2858	8067
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8074	23.435	NaN	3043.1	30	0	277.37	0.037			+	8859	EEQKRIQLQ	9	75	586.3243853974816	NaN	0	586.3255615234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EEQKRIQLQ_	REV__ENSG00000089177|ENST00000354981|KIF16B;REV__KIF16B|p.F1272Sfs*3|1|0.36|ENSG00000089177|chr20:16273392-16273392|A/-|frameshift_variant;REV__nc|ENSG00000089177|Q96L93-2|KIF16B;REV__nc|ENSG00000089177|Q96L93-4|KIF16B;REV__nc|ENSG00000089177|Q96L93-5|KIF16B;REV__nc|ENSG00000089177|Q96L93-6|KIF16B	56.72105179125745	0.16330365735109603	4				NaN	NaN	0	NaN	5214	2858	8067
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8092	23.472	NaN	135850	30	0	71498	0.214	+			17397	IAPTGHSL	8	78	398.2211945858578	794.4278362385156	2	398.2214660644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IAPTGHSL_	ENSG00000125354|ENST00000394610|SEPTIN6;ENSG00000138758|ENST00000264893|SEPTIN11;nc|ENSG00000125354|Q14141-3|SEPTIN6;nc|ENSG00000125354|Q14141-4|SEPTIN6;nc|ENSG00000125354|Q14141|SEPTIN6;nc|ENSG00000138758|Q9NVA2-2|SEPTIN11	76.84663266511073	0.3498490246073164	4				NaN	NaN	0	NaN	5229	2861	8091
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8093	23.476	NaN	69987	30	0	47633	0.106	+			319	AAPSAAREL	9	71	443.24252293071817	884.4704929282364	2	443.24273681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAPSAAREL_	ENSG00000107960|ENST00000224950|STN1	109.47833844074708	0.029530294723441826	4				NaN	NaN	0	NaN	5230	2861	8091
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8094	23.478	NaN	25980	30	0	11068	0.106	+			45459	TYAEKLHRL	9	77	377.54902350319924	NaN	0	377.5487060546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TYAEKLHRL_	DST|p.K5076Nfs*24|1|0.31|ENSG00000151914|chr6:56472218-56472218|T/-|frameshift_variant;DST|p.L1539Ffs*11|1|0.39|ENSG00000151914|chr6:56611525-56611526|-/A|frameshift_variant;DST|p.N1220Tfs*9|1|0.23|ENSG00000151914|chr6:56630354-56630354|T/-|frameshift_variant;DST|p.T4428Nfs*23|1|0.12|ENSG00000151914|chr6:56497896-56497897|-/T|frameshift_variant;ENSG00000151914|ENST00000680361|DST;ENST00000521104.1_1_6:56504020-56557947:-|nuORF;ENST00000523967.5_1_6:56504020-56716372:-|nuORF;nc|ENSG00000151914|Q03001-13|DST;nc|ENSG00000151914|Q03001-14|DST;nc|ENSG00000151914|Q03001-3|DST;nc|ENSG00000151914|Q03001-8|DST;nc|ENSG00000151914|Q03001-9|DST;nc|ENSG00000151914|Q03001|DST	56.72105179125745	0.16330365735109603	4				NaN	NaN	0	NaN	5231	2861	8091
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8095	23.48	NaN	7861.2	30	0	2401.5	0.106				-1	 	0	59	328.70893228421414	655.4033116352283	2	328.7093811035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5232	2861	8091
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8096	23.482	NaN	21392	30	0	12276	0.106			+	851	AEGSQQSIIS	10	64	340.5045333997116	1018.4917707993347	3	340.5051574707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEGSQQSIIS_	REV__ENSG00000186472|ENST00000333891|PCLO;REV__nc|ENSG00000186472|Q9Y6V0-6|PCLO;REV__PCLO|p.T5069Qfs*20|1|0.11|ENSG00000186472|chr7:82760722-82760722|T/-|frameshift_variant	41.080066990542036	0.5391928043837881	4				NaN	NaN	0	NaN	5233	2861	8091
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8097	23.483	NaN	13784	30	0	2381.9	0.036	+			28793	NPHEVQPSY	9	81	535.7480764588619	1069.4815999845237	2	535.7486572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NPHEVQPSY_	EGLN3|p.A203T|1|0.27|ENSG00000129521|chr14:33929083-33929083|C/T|missense_variant;ENSG00000129521|ENST00000250457|EGLN3	56.43379154798735	0.2433427591689151	4				NaN	NaN	0	NaN	5234	2861	8091
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8098	23.484	NaN	8500	30	0	809.45	0.141			+	47241	VMNRIQPFL	9	72	559.3134133883835	1116.612273843567	2	559.314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VMNRIQPFL_	REV__ENST00000597244.1_1_19:16688878-16689301:-|nuORF	66.42927471994793	0.16001998865088202	4				NaN	NaN	0	NaN	5235	2861	8091
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8116	23.523	NaN	138250	30	0	23176	0.162				-1	 	0	95	439.2527226876898	876.4908924421796	2	439.2529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5250	2864	8115
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8117	23.526	NaN	144870	30	0	35568	0.106	+			14137	GSMGSFSEK	9	104	465.20466733984364	928.3947817464873	2	465.205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSMGSFSEK_	EMC1|p.F608Lfs*7|1|0.38|ENSG00000127463|chr1:19231381-19231381|A/-|frameshift_variant;EMC1|p.F974Lfs*4|1|0.22|ENSG00000127463|chr1:19219363-19219363|A/-|frameshift_variant;ENSG00000127463|ENST00000477853|EMC1;nc|ENSG00000127463|Q8N766-2|EMC1;nc|ENSG00000127463|Q8N766-3|EMC1;nc|ENSG00000127463|Q8N766-4|EMC1	96.0336014099291	0.047854655524928534	4				NaN	NaN	0	NaN	5251	2864	8115
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8118	23.528	NaN	17902	30	0	2360.2	0.106	+			42421	TAKSVTCTY	9	88	487.2359184025179	972.4572838718358	2	487.2364196777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TAKSVTCTY_	ENSG00000141510|ENST00000269305|TP53;ENST00000505014.5_1_17:7578140-7579834:-|nuORF;nc|ENSG00000141510|P04637-2|TP53;nc|ENSG00000141510|P04637-3|TP53;nc|ENSG00000141510|P04637-4|TP53;nc|ENSG00000141510|P04637-5|TP53;nc|ENSG00000141510|P04637-6|TP53;TP53|p.C229Yfs*10|1|0.59|ENSG00000141510|chr17:7674276-7674277|AC/-|frameshift_variant;TP53|p.C242Afs*5|1|0.54|ENSG00000141510|chr17:7674240-7674240|G/-|frameshift_variant;TP53|p.E198Gfs*11|1|0.43|ENSG00000141510|chr17:7674938-7674939|-/C|frameshift_variant;TP53|p.E336Sfs*9|1|0.15|ENSG00000141510|chr17:7670704-7670704|A/-|frameshift_variant;TP53|p.G302Rfs*4|1|0.13|ENSG00000141510|chr17:7673717-7673718|-/G|frameshift_variant;TP53|p.H178Tfs*69|1|0.68|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant;TP53|p.I195Nfs*14|1|0.81|ENSG00000141510|chr17:7674947-7674948|-/T|frameshift_variant;TP53|p.P151Rfs*27|1|0.46|ENSG00000141510|chr17:7675153-7675160|GGGCGGGG/-|frameshift_variant;TP53|p.P153Afs*28|1|0.62|ENSG00000141510|chr17:7675156-7675157|-/G|frameshift_variant;TP53|p.P301Qfs*44|1|0.5|ENSG00000141510|chr17:7673718-7673718|G/-|frameshift_variant;TP53|p.P322Hfs*23|1|0.53|ENSG00000141510|chr17:7673563-7673563|G/-|frameshift_variant;TP53|p.Q331Sfs*6|1|0.66|ENSG00000141510|chr17:7673537-7673538|-/A|frameshift_variant;TP53|p.R280Kfs*59|1|0.41|ENSG00000141510|chr17:7673763-7673781|TCCTCTGTGCGCCGGTCTC/-|frameshift_variant;TP53|p.R290Kfs*53|1|0.62|ENSG00000141510|chr17:7673747-7673753|CTTGCGG/-|frameshift_variant;TP53|p.R335Lfs*10|1|0.74|ENSG00000141510|chr17:7670705-7670705|C/-|frameshift_variant;TP53|p.S127F|1|0.75|ENSG00000141510|chr17:7675232-7675232|G/A|missense_variant;TP53|p.S127T|1|0.68|ENSG00000141510|chr17:7675233-7675233|A/T|missense_variant	96.0336014099291	0.047854655524928534	4				NaN	NaN	0	NaN	5252	2864	8115
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8119	23.53	NaN	52969	30	0	32802	0.106			+	50249	WPQPLLHQI	9	92	377.8805551853213	1130.619836156164	3	377.8807678222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_WPQPLLHQI_	REV__ENSG00000105088|ENST00000264833|OLFM2	37.15910966729921	0.4535818937225704	4				NaN	NaN	0	NaN	5253	2864	8115
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8120	23.532	NaN	7651	30	0	716.09	0.106	+			12780	GELSKVTKV	9	71	480.78924580802175	959.5639386828435	2	480.7895812988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GELSKVTKV_	ENSG00000119421|ENST00000373768|NDUFA8	59.93077597824379	0.21419174904018318	4				NaN	NaN	0	NaN	5254	2864	8115
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8121	23.534	NaN	8672.3	30	0	789.36	0.106	+			7072	CVGPLPCMLLL	11	84	579.8081475668906	1157.6017422005812	2	579.8094482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_CVGPLPCMLLL_	ENST00000438378.2_1_2:132275414-132277996:+|nuORF	60.29395666154354	0.3208311535967446	4				NaN	NaN	0	NaN	5255	2864	8115
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8122	23.535	NaN	13549	30	0	4185.6	0.04	+			22534	KTRDRTCPVHE	11	70	447.8945092868579	1340.6616984607738	3	447.8948059082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KTRDRTCPVHE_	ENSG00000116580|ENST00000368331|GON4L;ENST00000473267.1_1_1:155721749-155721992:-|nuORF;ENST00000500626.2_1_1:155585459-155586181:-|nuORF;nc|ENSG00000116580|Q3T8J9-3|GON4L	28.5767321226876	0.690044582712672	4				NaN	NaN	0	NaN	5256	2864	8115
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8140	23.572	NaN	83748	30	0	17163	0.177			+	33216	RFKFPSVK	8	88	504.8051771821181	NaN	0	504.8080139160156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RFKFPSVK_	REV__nc|ENSG00000204962|Q9Y5H6-2|PCDHA8	73.97473282117947	1.7418937515398478	4				NaN	NaN	0	NaN	5271	2867	8139
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8141	23.575	NaN	40588	30	0	10010	0.106				-1	 	0	91	640.3402158218587	1278.6658787105173	2	640.3414306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5272	2867	8139
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8142	23.577	NaN	41384	30	0	8451.4	0.106				-1	 	0	85	443.75277732221934	885.4910017112387	2	443.7530822753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5273	2867	8139
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8143	23.579	NaN	31864	30	0	7077.5	0.106	+			32294	QTNPTYLAK	9	96	518.2763720899359	1034.5381912466717	2	518.2772827148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QTNPTYLAK_	ENSG00000140575|ENST00000268182|IQGAP1;IQGAP1|p.S1529Afs*10|1|0.15|ENSG00000140575|chr15:90492665-90492665|A/-|frameshift_variant	59.93077597824379	0.21419174904018318	4				NaN	NaN	0	NaN	5274	2867	8139
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8144	23.581	NaN	13383	30	0	1556.8	0.106	+			22126	KSPEIQRAL	9	73	521.3053190083826	1040.5960850835652	2	521.3064575195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KSPEIQRAL_	ENSG00000174444|ENST00000307961|RPL4;ENST00000422486.1_1_3:185135660-185136437:-|nuORF;ENST00000567229.5_1_15:66791747-66793486:-|nuORF	107.00750918261382	0.032051501805654005	4				NaN	NaN	0	NaN	5275	2867	8139
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8145	23.583	NaN	31896	30	0	3386.4	0.106				-1	 	0	78	430.2473154493906	858.4800779655812	2	430.2477111816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5276	2867	8139
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8146	23.585	NaN	13156	30	0	2790.9	0.037	+			17651	IEKFDKSKL	9	79	369.88463504027766	1106.632075721033	3	369.8851318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IEKFDKSKL_	ENSG00000154620|ENST00000284856|TMSB4Y;ENSG00000205542|ENST00000451311|TMSB4X;ENST00000323496.5_1_9:131104444-131104642:+|nuORF;TMSB4X|p.A8V|1|0.09|ENSG00000205542|chrX:12976284-12976284|C/T|missense_variant	53.08895987439943	0.27122541748218487	4				NaN	NaN	0	NaN	5277	2867	8139
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8164	23.622	NaN	111110	30	0	10618	0.215	+			40761	SVDKLVIQK	9	123	515.3182721309321	1028.621991328664	2	515.3189697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVDKLVIQK_	ENST00000523612.1_1_8:142469282-142469963:+|nuORF	143.37361013837676	0.008897369944672323	4				NaN	NaN	0	NaN	5292	2870	8163
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8165	23.626	NaN	78940	30	0	24488	0.106				-1	 	0	109	343.8810630479616	1028.6213597440849	3	343.8816223144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5293	2870	8163
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8166	23.628	NaN	17492	30	0	2859.3	0.106	+			26810	LVSPEQPPK	9	83	497.7812644012652	993.5479758693305	2	497.78179931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LVSPEQPPK_	ENSG00000079819|ENST00000337057|EPB41L2;nc|ENSG00000079819|O43491-2|EPB41L2;nc|ENSG00000079819|O43491-3|EPB41L2;nc|ENSG00000079819|O43491-4|EPB41L2	54.722347961057174	0.257609425301511	4				NaN	NaN	0	NaN	5294	2870	8163
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8167	23.629	NaN	18158	30	0	9776.7	0.106				-1	 	0	75	439.2527226876898	876.4908924421796	2	440.2558288574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5295	2870	8163
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8168	23.631	NaN	22880	30	0	10398	0.106				-1	 	0	65	420.6898281958365	839.3651034584731	2	420.69024658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5296	2870	8163
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8169	23.633	NaN	35904	30	0	5534.6	0.036	+			1444	AEYSTKNNAL	10	81	555.7752330779538	NaN	0	555.7754516601562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEYSTKNNAL_	ENSG00000129128|ENST00000503362|SPCS3;ENST00000507678.5_1_4:177243228-177249478:+|nuORF;ENST00000513139.1_1_4:177241188-177248429:+|nuORF	117.81106730687013	0.019722124347440237	4				NaN	NaN	0	NaN	5297	2870	8163
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8170	23.634	NaN	14251	30	0	4685.8	0.146				-1	 	0	71	400.5829925346537	1198.7271482041613	3	400.58331298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5298	2870	8163
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8188	23.673	NaN	163500	30	0	32377	0.159	+			36409	SETNDTKVL	9	101	503.75574336462466	1005.4969337960493	2	503.75634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SETNDTKVL_	ENSG00000111057|ENST00000388835|KRT18;ENST00000453838.2_1_1:182928211-182928406:-|nuORF	112.41091882917199	0.026537921851008135	4				NaN	NaN	0	NaN	5313	2873	8187
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8189	23.676	NaN	29309	30	0	2490.5	0.106	+			44643	TTFTKIVNK	9	90	526.3112314624702	NaN	0	526.3111572265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTFTKIVNK_	ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1670Tfs*23|1|0.29|ENSG00000174231|chr17:1659487-1659487|C/-|frameshift_variant	98.58198989935565	0.02429614701295995	4				NaN	NaN	0	NaN	5314	2873	8187
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8190	23.678	NaN	21262	30	0	13591	0.106				-1	 	0	74	470.74541830805964	939.4762836829193	2	470.74566650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5315	2873	8187
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8191	23.68	NaN	28328	30	0	6802.8	0.106	+			31831	QPRENPFQN	9	88	565.2728527057899	1128.5311524783797	2	565.2740478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QPRENPFQN_	ENSG00000067369|ENST00000382044|TP53BP1;ENST00000411772.5_2_15:43699583-43738985:-|nuORF;nc|ENSG00000067369|Q12888-3|TP53BP1;nc|ENSG00000067369|Q12888|TP53BP1	66.42927471994793	0.16001998865088202	4				NaN	NaN	0	NaN	5316	2873	8187
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8192	23.681	NaN	7712	30	0	1903.9	0.106			+	47636	VSARRGHIGV	10	67	351.20909737123975	1050.6054627139192	3	351.20965576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSARRGHIGV_	REV__ENST00000506216.5_1_4:5858033-5890143:-|nuORF	16.473147378115264	0.7327422906225664	4				NaN	NaN	0	NaN	5317	2873	8187
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8193	23.683	NaN	18882	30	0	3020.1	0.106				-1	 	0	66	436.2472647951229	870.4799766570458	2	436.24755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5318	2873	8187
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8194	23.685	NaN	16808	30	0	6533.9	0.035	+			35493	SATQAVFQK	9	70	490.2638028676552	NaN	0	490.2637023925781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SATQAVFQK_	ENSG00000100949|ENST00000216840|RABGGTA;ENST00000558534.5_1_14:24738716-24740321:-|nuORF;ENST00000560998.5_1_14:24737570-24740321:-|nuORF;RABGGTA|p.P160Lfs*5|1|0.17|ENSG00000100949|chr14:24269643-24269643|G/-|frameshift_variant;RABGGTA|p.Q194Sfs*43|1|0.31|ENSG00000100949|chr14:24269542-24269542|G/-|frameshift_variant	131.115847015877	0.0004156310494928369	4				NaN	NaN	0	NaN	5319	2873	8187
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8212	23.722	NaN	28302	30	0	3059.7	0.215	+			35842	SEDEPTRSL	9	101	517.2424845924068	1032.4704162516134	2	517.2435302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEDEPTRSL_	ENSG00000083312|ENST00000337273|TNPO1;ENSG00000105576|ENST00000425528|TNPO2;ENST00000588484.1_1_19:12826020-12830096:-|nuORF;ENST00000589956.5_1_19:12822112-12831764:-|nuORF;nc|ENSG00000083312|Q92973-2|TNPO1;nc|ENSG00000105576|O14787-2|TNPO2;TNPO1|p.C844Vfs*45|4|0.31|ENSG00000083312|chr5:72903718-72903718|T/-|frameshift_variant;TNPO2|p.H347Pfs*4|1|0.35|ENSG00000105576|chr19:12711373-12711374|-/G|frameshift_variant	109.47833844074708	0.029530294723441826	4				NaN	NaN	0	NaN	5334	2876	8211
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8213	23.725	NaN	49298	30	0	30323	0.106				-1	 	0	78	459.249925485792	916.485298038384	2	459.25018310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5335	2876	8211
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8214	23.727	NaN	22817	30	0	3758.5	0.106	+			16471	HETGTKITI	9	96	500.2768785739982	998.5392042147964	2	500.2769470214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HETGTKITI_	ENSG00000073792|ENST00000382199|IGF2BP2;ENST00000496495.1_1_3:185393074-185393625:-|nuORF;ENST00000550858.1_1_12:42681476-42682067:+|nuORF;nc|ENSG00000073792|Q9Y6M1-1|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-3|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-4|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-5|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-6|IGF2BP2	104.0567914643314	0.03506238181059741	4				NaN	NaN	0	NaN	5336	2876	8211
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8215	23.729	NaN	13795	30	0	1753.1	0.106			+	9384	EKEARVGPSP	10	80	535.285210126807	1068.5558673204139	2	535.2855224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EKEARVGPSP_	REV__ENSG00000158258|ENST00000458420|CLSTN2;REV__ENST00000511524.1_1_3:139654198-140275504:+|nuORF	57.885488727062594	0.385071442053863	4				NaN	NaN	0	NaN	5337	2876	8211
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8216	23.731	NaN	7925.5	30	0	630.64	0.106				-1	 	0	75	492.2553209585629	982.4960889839258	2	492.255615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5338	2876	8211
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8217	23.733	NaN	84812	30	0	28231	0.035				-1	 	0	97	488.78667148084327	975.5587900284866	2	488.78692626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5339	2876	8211
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8218	23.733	NaN	14793	30	0	3328.6	0.138	+			26433	LTGPPGVGK	9	85	413.24454546327837	824.4745379933568	2	413.2449035644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LTGPPGVGK_	ENSG00000135778|ENST00000366628|NTPCR	54.776311868738084	0.25715957988447635	4				NaN	NaN	0	NaN	5340	2876	8211
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8236	23.773	NaN	33717	30	0	8372	0.214				-1	 	0	89	469.78640912850386	937.5582653238077	2	469.7866516113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5355	2879	8235
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8237	23.776	NaN	27141	30	0	4671	0.106				-1	 	0	92	465.72436252139573	929.4341721095915	2	465.7247314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5356	2879	8235
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8238	23.778	NaN	24312	30	0	3534.1	0.106				-1	 	0	99	515.7868570978326	1029.559161262465	2	515.78759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5357	2879	8235
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8239	23.78	NaN	19758	30	0	3678.6	0.106			+	-1	SMLHSKYTK	9	88	555.7829675408354	NaN	0	555.7828979492188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_SM(Oxidation (M))LHSKYTK_	REV__ENSG00000154803|ENST00000285071|FLCN	75.04331003522576	0.0883683072398826	4				NaN	NaN	0	NaN	5358	2879	8235
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8240	23.782	NaN	13003	30	0	3003.1	0.106				-1	REKLQEEML	9	86	596.3052798676583	1190.5960068021166	2	596.3054809570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_REKLQEEM(Oxidation (M))L_	ENSG00000026025|ENST00000544301|VIM;ENST00000485947.1_1_10:17271421-17272784:+|nuORF	85.86182877749512	0.07653218437724067	4				NaN	NaN	0	NaN	5359	2879	8235
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8241	23.784	NaN	10975	30	0	3442.7	0.039			+	-1	RLPSVEMCVGQ	11	82	638.3132432048012	1274.6119334764023	2	638.3142700195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_RLPSVEMC(Carbamidomethyl (C))VGQ_	REV__ENSG00000278619|ENST00000614766|MRM1	35.15202426646627	0.6210751305041943	4				NaN	NaN	0	NaN	5360	2879	8235
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8242	23.784	NaN	7551	30	0	1077.9	0.141				-1	 	0	64	439.2527226876898	876.4908924421796	2	441.2579040527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5361	2879	8235
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8260	23.823	NaN	21541	30	0	8397.6	0.214	+			3920	ATASLGVIHK	10	73	332.8660062901966	NaN	0	332.8659973144531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATASLGVIHK_	ENSG00000173692|ENST00000308696|PSMD1;nc|ENSG00000173692|Q99460-2|PSMD1;PSMD1-NHEJ1|1|fusion;PSMD1|p.K849Rfs*44|1|0.38|ENSG00000173692|chr2:231165258-231165258|A/-|frameshift_variant;PSMD1|p.L603Afs*7|1|0.19|ENSG00000173692|chr2:231085100-231085101|-/T|frameshift_variant	42.396135135203025	0.3536752194735987	4				NaN	NaN	0	NaN	5376	2882	8259
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8261	23.827	NaN	21984	30	0	5287.6	0.106	+			39408	STDPSVLGK	9	90	452.2430093044692	902.4714656757384	2	452.2425537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STDPSVLGK_	ENSG00000114315|ENST00000232424|HES1;HES1|p.Y110C|1|0.27|ENSG00000114315|chr3:194137719-194137719|A/G|missense_variant	104.0567914643314	0.03506238181059741	4				NaN	NaN	0	NaN	5377	2882	8259
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8262	23.829	NaN	18092	30	0	3712.9	0.106	+			1016	AEKLGETEKL	10	91	373.20921630523026	1116.6058195158907	3	373.20965576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEKLGETEKL_	ENSG00000182481|ENST00000330459|KPNA2;ENST00000578492.5_1_17:62746826-62750158:-|nuORF	49.536043120802724	0.461275219792494	4				NaN	NaN	0	NaN	5378	2882	8259
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8263	23.83	NaN	27953	30	0	5481.7	0.106				-1	LGRQHCSILE	10	73	404.8764460576511	1211.6075087731533	3	404.8767395019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_LGRQHC(Carbamidomethyl (C))SILE_	ENSG00000047662|ENST00000265018|FAM184B;FAM184B|p.L536Ffs*5|1|0.1|ENSG00000047662|chr4:17664648-17664649|-/A|frameshift_variant	38.753607047826485	0.5606299674732264	4				NaN	NaN	0	NaN	5379	2882	8259
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8264	23.832	NaN	5179.8	30	0	1915.2	0.106	+			23640	LAQRSLYK	8	59	326.8622326018724	977.5648684058172	3	326.8625183105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LAQRSLYK_	ENSG00000197016|ENST00000330619|ZNF470;nc|ENSG00000197016|Q6ECI4-2|ZNF470	44.116797842482775	0.6307669463330267	4				NaN	NaN	0	NaN	5380	2882	8259
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8265	23.834	NaN	7174.3	30	0	1445	0.037	+			46683	VGHDDPEVKF	10	68	381.51962318961245	NaN	0	381.51959228515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VGHDDPEVKF_	CON__ENSEMBL:ENSBTAP00000024462;CON__ENSEMBL:ENSBTAP00000024466	36.446750945000026	0.3805027428805705	4				NaN	NaN	0	NaN	5381	2882	8259
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8266	23.835	NaN	4778.2	30	0	849.3	0.14			+	28625	NKVKKYDL	8	46	336.5342518593517	NaN	0	336.53424072265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NKVKKYDL_	REV__ENST00000566430.2_1_16:68349882-68355449:+|nuORF	28.2542754592877	1.7418937515398478	4				NaN	NaN	0	NaN	5382	2882	8259
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8284	23.874	NaN	19528	30	0	5893.1	0.214				-1	VCLDCLLEI	9	79	359.8484833777892	1076.5236207335677	3	359.8489990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_VCLDC(Carbamidomethyl (C))LLEI_	ENST00000446495.1_1_X:115827133-115828152:-|nuORF	40.77816245573522	0.41113185337114944	4				NaN	NaN	0	NaN	5397	2885	8283
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8285	23.878	NaN	26193	30	0	9187	0.106				-1	 	0	95	350.22140549562283	1047.6423870870685	3	350.221923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5398	2885	8283
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8286	23.88	NaN	17777	30	0	2442.5	0.106	+			18801	ITSPVVTQK	9	83	486.7892019056396	971.5638508780792	2	486.7897033691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ITSPVVTQK_	ENSG00000113161|ENST00000287936|HMGCR;ENST00000504466.1_1_5:74645886-74647190:+|nuORF;nc|ENSG00000113161|P04035-2|HMGCR;nc|ENSG00000113161|P04035-3|HMGCR	82.7504851949679	0.08565546331141553	4				NaN	NaN	0	NaN	5399	2885	8283
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8287	23.881	NaN	23350	30	0	3453.2	0.106				-1	 	0	91	539.2692488642402	1076.5239447952804	2	539.270263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5400	2885	8283
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8288	23.883	NaN	20439	30	0	2750.7	0.106			+	-1	KKSLMKPDTKQ	11	85	440.58366267789484	1318.7291586338845	3	440.58355712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_KKSLM(Oxidation (M))KPDTKQ_	REV__ENSG00000135336|ENST00000392844|ORC3;REV__ENST00000478028.1_1_6:88317392-88318948:+|nuORF;REV__nc|ENSG00000135336|Q9UBD5-2|ORC3;REV__nc|ENSG00000135336|Q9UBD5-3|ORC3;REV__ORC3|p.R204Gfs*16|2|0.19|ENSG00000135336|chr6:87609120-87609120|A/-|frameshift_variant	47.227680397652996	0.4590463137409202	4				NaN	NaN	0	NaN	5401	2885	8283
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8289	23.885	NaN	10868	30	0	2514.8	0.036	+			4937	ATQQEFYAK	9	85	543.2665531601185	1084.518553387037	2	543.2673950195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATQQEFYAK_	ENSG00000130787|ENST00000253083|HIP1R;ENST00000538236.1_1_12:123344649-123345071:+|nuORF;HIP1R|p.E1021Vfs*2|1|0.32|ENSG00000130787|chr12:122861412-122861445|AGAGGAGGTGGCCATCCGGCCCAGCACTGCCCCC/-|frameshift_variant	136.98908636845044	0.011892605960677736	4				NaN	NaN	0	NaN	5402	2885	8283
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8290	23.886	NaN	17472	30	0	3355.5	0.145	+			44713	TTLAFKPIKK	10	74	382.91267762971916	1145.7162034893574	3	382.9129333496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TTLAFKPIKK_	ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A	51.52775601994872	0.4429225830406686	4				NaN	NaN	0	NaN	5403	2885	8283
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8308	23.925	NaN	118450	30	0	14296	0.177	+			15527	GVDDKFYSK	9	101	529.7604655817372	1057.5063782302743	2	529.7614135742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVDDKFYSK_	ENSG00000105254|ENST00000221855|TBCB;ENST00000392178.8_1_19:36606435-36612715:+|nuORF;ENST00000481742.1_1_19:36606435-36607215:+|nuORF;ENST00000589308.1_1_19:36606815-36612715:+|nuORF;nc|ENSG00000105254|Q99426-2|TBCB	136.98908636845044	0.011892605960677736	4				NaN	NaN	0	NaN	5418	2888	8307
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8309	23.928	NaN	34078	30	0	5780.8	0.106				-1	 	0	89	332.2057568758612	993.5954412277836	3	332.206298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5419	2888	8307
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8310	23.93	NaN	13861	30	0	1755.6	0.106	+			13788	GQHTVLLVK	9	80	497.80528557922077	993.5960182252416	2	497.805908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GQHTVLLVK_	ENSG00000180198|ENST00000683442|RCC1;nc|ENSG00000180198|P18754-2|RCC1	112.2953585152457	0.026655838328212944	4				NaN	NaN	0	NaN	5420	2888	8307
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8311	23.932	NaN	16428	30	0	1095.5	0.106	+			13855	GQWKEEQKL	9	89	573.3003856304155	1144.5862183276308	2	573.3015747070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GQWKEEQKL_	ENSG00000157020|ENST00000350697|SEC13;ENST00000477547.6_1_3:10345637-10359739:-|nuORF;ENST00000479868.6_1_3:10342947-10354476:-|nuORF;nc|ENSG00000157020|P55735-2|SEC13;nc|ENSG00000157020|P55735-3|SEC13;nc|ENSG00000157020|P55735-4|SEC13	134.7655990226056	0.012935733000282069	4				NaN	NaN	0	NaN	5421	2888	8307
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8312	23.934	NaN	25031	30	0	15415	0.106				-1	 	0	75	353.5094010526677	1057.5063737582032	3	353.50994873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5422	2888	8307
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8313	23.936	NaN	12108	30	0	1975.2	0.106			+	34281	RTKTDYMTITY	11	91	704.842876617599	1407.671200301998	2	704.8446044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_RTKTDYM(Oxidation (M))TITY_	REV__ENSG00000178607|ENST00000433197|ERN1;REV__ENST00000579249.1_1_17:62145505-62149428:-|nuORF	44.377184641726394	0.49804979881800077	4				NaN	NaN	0	NaN	5423	2888	8307
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8314	23.937	NaN	8085.1	30	0	859.25	0.035	+			22160	KSSAEVTPDL	10	78	523.7719123504523	NaN	0	523.7688598632812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KSSAEVTPDL_	ENSG00000249437|ENST00000517649|NAIP;ENST00000511830.2_1_5:69390488-69422514:-|nuORF;ENST00000512908.2_1_5:70398727-70422449:-|nuORF;nc|ENSG00000249437|Q13075-2|NAIP	58.22992032128504	0.24873293749302264	4				NaN	NaN	0	NaN	5424	2888	8307
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8331	23.973	NaN	77402	30	0	11042	0.199	+			14869	GTLNQPLTK	9	100	486.27918047907116	970.5438080249423	2	486.2792663574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTLNQPLTK_	ENSG00000103671|ENST00000261884|TRIP4	140.11223852658463	0.010427410095706195	4				NaN	NaN	0	NaN	5438	2891	8330
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8332	23.976	NaN	12593	30	0	1385.7	0.106			+	33369	RHRIRGAS	8	85	476.78163352761015	951.5487141220203	2	476.78204345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RHRIRGAS_	REV__ENST00000591608.1_1_19:11474500-11475052:+|nuORF;REV__nc|ENSG00000105520|Q96GM1|PLPPR2	57.81127852772723	0.5234495074909924	4				NaN	NaN	0	NaN	5439	2891	8330
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8333	23.978	NaN	45005	30	0	6492.6	0.106	+			29433	PCGASQSMTLK	11	85	561.7664954062815	1121.5184378793629	2	561.7679443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PCGASQSMTLK_	ENST00000601799.5_1_19:57742659-57743507:+|nuORF	107.00750918261382	0.0462000819417584	4				NaN	NaN	0	NaN	5440	2891	8330
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8334	23.98	NaN	27471	30	0	7150.7	0.106	+			10338	ETTIKFAP	8	89	453.7511178454298	NaN	0	453.7422180175781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ETTIKFAP_	ENSG00000064115|ENST00000343028|TM7SF3	40.5726180659479	1.7418937515398478	4				NaN	NaN	0	NaN	5441	2891	8330
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8335	23.981	NaN	30113	30	0	5149.1	0.106	+			41192	SVLDKSLTK	9	87	495.79442242850206	989.5742919238041	2	495.79425048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVLDKSLTK_	ENSG00000198265|ENST00000358691|HELZ;ENST00000578938.1_1_17:65172688-65184471:-|nuORF;HELZ|p.L1089Ffs*20|1|0.05|ENSG00000198265|chr17:67128771-67128772|-/GTTAATG|frameshift_variant;nc|ENSG00000198265|P42694-2|HELZ	125.71293069911285	0.017741295328254008	4				NaN	NaN	0	NaN	5442	2891	8330
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8336	23.983	NaN	12831	30	0	1285.3	0.106				-1	 	0	87	509.79187408174425	1017.5691952302885	2	509.7925109863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5443	2891	8330
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8337	23.985	NaN	13809	30	0	1151.4	0.035				-1	 	0	80	502.7549288907401	1003.4953048482802	2	502.755615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5444	2891	8330
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8355	24.022	NaN	120940	30	0	41191	0.215			+	44800	TTQRTGRARQW	11	110	454.24487139030236	1359.7127847711072	3	454.24530029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTQRTGRARQW_	REV__ENST00000577174.1_1_16:10935241-10935388:-|nuORF	39.873155843976775	0.5596786644756743	4				NaN	NaN	0	NaN	5459	2894	8354
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8356	24.026	NaN	33315	30	0	4561.6	0.106				-1	 	0	91	433.2656795576942	864.5168061821885	2	433.2661437988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5460	2894	8354
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8357	24.028	NaN	16753	30	0	4297.9	0.106			+	37690	SLSGTISAGAL	11	76	488.76836599252937	975.5221790518588	2	488.7687683105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLSGTISAGAL_	REV__ENSG00000034677|ENST00000341084|RNF19A;REV__nc|ENSG00000034677|Q9NV58-2|RNF19A;REV__nc|ENSG00000034677|Q9NV58-3|RNF19A	31.529811441608018	0.6590691889962369	4				NaN	NaN	0	NaN	5461	2894	8354
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8358	24.029	NaN	24829	30	0	5264.9	0.106	+			4920	ATQLLKLAHK	10	100	374.90416448375845	1121.6906640514753	3	374.9045715332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATQLLKLAHK_	ENSG00000148303|ENST00000323345|RPL7A;ENST00000424559.2_1_22:19780074-19780431:+|nuORF;ENST00000434317.1_1_7:102395625-102396051:+|nuORF;ENST00000437848.1_1_1:46117146-46117242:-|nuORF;ENST00000463740.5_1_9:136215098-136217195:+|nuORF;ENST00000468834.1_1_10:33346560-33347304:-|nuORF;ENST00000473054.1_1_14:68805457-68806021:-|nuORF;ENST00000485706.5_1_9:136216467-136216912:+|nuORF;ENST00000486157.1_1_5:78825151-78825526:+|nuORF	72.09557110113691	0.26019946548822415	4				NaN	NaN	0	NaN	5462	2894	8354
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8359	24.031	NaN	18948	30	0	2475.1	0.106	+			43961	TPEEKIREY	9	87	582.7985050974793	NaN	0	582.798583984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TPEEKIREY_	ENSG00000138668|ENST00000313899|HNRNPD;ENST00000514325.1_1_4:83279715-83279970:-|nuORF;nc|ENSG00000138668|Q14103-2|HNRNPD;nc|ENSG00000138668|Q14103-3|HNRNPD;nc|ENSG00000138668|Q14103-4|HNRNPD	139.97047562133406	0.0006999293601740031	4				NaN	NaN	0	NaN	5463	2894	8354
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8360	24.033	NaN	6643.7	30	0	951.66	0.036				-1	 	0	73	558.78502247664	1115.55549202008	2	558.785888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5464	2894	8354
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8361	24.034	NaN	3993.4	30	0	375.68	0.142	+			20056	KEKEFEETM	9	71	585.7705110072217	1169.5264690812432	2	585.7711791992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KEKEFEETM_	ENSG00000204843|ENST00000628224|DCTN1;nc|ENSG00000204843|Q14203-2|DCTN1;nc|ENSG00000204843|Q14203-3|DCTN1;nc|ENSG00000204843|Q14203-4|DCTN1;nc|ENSG00000204843|Q14203-5|DCTN1;nc|ENSG00000204843|Q14203-6|DCTN1	80.45461616416974	0.09558281504443908	4				NaN	NaN	0	NaN	5465	2894	8354
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8379	24.072	NaN	30499	30	0	5087	0.214				-1	 	0	79	504.71641214113896	1007.4182713490779	2	504.7167663574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5480	2897	8378
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8380	24.076	NaN	17006	30	0	2091	0.106	+			34796	RYLEKNVKL	9	93	388.2360731667982	1161.6863901005945	3	388.23614501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RYLEKNVKL_	ENSG00000137574|ENST00000260129|TGS1;ENST00000523948.5_1_8:56686169-56737149:+|nuORF;TGS1|p.G559Rfs*2|1|0.17|ENSG00000137574|chr8:55799039-55799040|-/A|frameshift_variant	120.30596017624542	0.02101454110788768	4				NaN	NaN	0	NaN	5481	2897	8378
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8381	24.078	NaN	8993.7	30	0	611.12	0.106	+			3624	ASVVAIDNK	9	79	458.75802777714097	915.501502621082	2	458.75823974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASVVAIDNK_	ENSG00000102804|ENST00000458659|TSC22D1;ENSG00000157514|ENST00000372383|TSC22D3;ENST00000487881.2_1_13:45010128-45010713:-|nuORF;nc|ENSG00000102804|Q15714-2|TSC22D1;nc|ENSG00000102804|Q15714-3|TSC22D1;nc|ENSG00000157514|Q99576|TSC22D3	120.8684288430529	0.02067403653475984	4				NaN	NaN	0	NaN	5482	2897	8378
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8382	24.08	NaN	17078	30	0	3934	0.106	+			15584	GVHASASAI	9	72	406.7161593484737	811.4177657637474	2	406.7164001464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GVHASASAI_	ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;TRRAP|p.K3443Sfs*19|1|0.28|ENSG00000196367|chr7:99004246-99004246|A/-|frameshift_variant	60.29395666154354	0.21116425950210296	4				NaN	NaN	0	NaN	5483	2897	8378
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8383	24.082	NaN	14246	30	0	1080.7	0.106	+			3900	ATAQNIMNPK	10	78	544.2806359810802	1086.5467190289603	2	544.2821044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATAQNIMNPK_	ENSG00000175311|ENST00000311620|ANKS4B	112.10723106719422	0.0417416748461292	4				NaN	NaN	0	NaN	5484	2897	8378
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8384	24.083	NaN	9268.9	30	0	865.04	0.034				-1	 	0	58	462.2264904922992	922.4384280513984	2	462.2267761230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5485	2897	8378
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8385	24.084	NaN	13959	30	0	4696.2	0.144			+	-1	QCLLFSSVSTV	11	68	414.2135723864181	1239.6188877594543	3	414.21417236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_QC(Carbamidomethyl (C))LLFSSVSTV_	REV__ENST00000368653.7_1_10:129921217-129923846:-|nuORF	34.08650109265054	0.6322515996262609	4				NaN	NaN	0	NaN	5486	2897	8378
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8403	24.123	NaN	58426	30	0	13420	0.214	+			36090	SEKEKQIVL	9	94	537.3122138625473	1072.6098747918945	2	537.3140869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEKEKQIVL_	ENSG00000167861|ENST00000425042|HID1;HID1|p.L141Wfs*62|1|0.54|ENSG00000167861|chr17:74963048-74963048|G/-|frameshift_variant;HID1|p.P773Lfs*8|1|0.17|ENSG00000167861|chr17:74951619-74951619|G/-|frameshift_variant;nc|ENSG00000167861|Q8IV36-2|HID1	102.0615471778698	0.03709830720253279	4				NaN	NaN	0	NaN	5501	2900	8402
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8404	24.127	NaN	27181	30	0	2557.3	0.106	+			14710	GTIIVSGSTEK	11	89	546.2997782469798	1090.5850035607596	2	546.3012084960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTIIVSGSTEK_	ENSG00000114742|ENST00000302313|WDR48;nc|ENSG00000114742|Q8TAF3-3|WDR48;nc|ENSG00000114742|Q8TAF3-4|WDR48	128.3478880297481	0.0041339947484058445	4				NaN	NaN	0	NaN	5502	2900	8402
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8405	24.129	NaN	30949	30	0	17596	0.106				-1	 	0	74	465.25542023470575	928.4962875362115	2	465.2557678222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5503	2900	8402
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8406	24.131	NaN	22710	30	0	2947.3	0.106				-1	 	0	87	471.7656762576429	941.5167995820858	2	471.7659912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5504	2900	8402
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8407	24.132	NaN	12357	30	0	1301.1	0.106	+			10391	EVDPDTKEM	9	77	532.2333813444028	1062.4522097556055	2	532.2345581054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EVDPDTKEM_	ENSG00000182774|ENST00000647841|RPS17;ENST00000396783.2_1_6:29457050-29457287:-|nuORF;ENST00000423610.1_1_22:32435574-32435880:+|nuORF;ENST00000461663.1_1_5:116052154-116052343:+|nuORF;ENST00000561068.5_3_15:83205554-83208094:-|nuORF	148.98678547993487	0.0071052929883181565	4				NaN	NaN	0	NaN	5505	2900	8402
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8408	24.134	NaN	6178.5	30	0	2689.2	0.035	+			26588	LTVHIEQAN	9	69	512.7737759636132	1023.5329989940263	2	512.7747192382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LTVHIEQAN_	ENSG00000083857|ENST00000441802|FAT1;FAT1|p.G2934Vfs*3|2|0.37|ENSG00000083857|chr4:186617787-186617787|T/-|frameshift_variant;FAT1|p.K1225Nfs*9|1|0.03|ENSG00000083857|chr4:186636885-186636885|G/-|frameshift_variant;FAT1|p.N3847Yfs*7|1|0.03|ENSG00000083857|chr4:186601370-186601371|-/TTATA|frameshift_variant;FAT1|p.P3228Lfs*42|1|0.27|ENSG00000083857|chr4:186611556-186611556|G/-|frameshift_variant;FAT1|p.P4313Lfs*36|1|0.34|ENSG00000083857|chr4:186596602-186596602|G/-|frameshift_variant;FAT1|p.Q2933Hfs*14|1|0.33|ENSG00000083857|chr4:186617787-186617788|-/G|frameshift_variant;FAT1|p.T1364Yfs*8|1|0.23|ENSG00000083857|chr4:186636118-186636119|-/A|frameshift_variant;FAT1|p.V1878Cfs*8|2|0.22|ENSG00000083857|chr4:186620955-186620956|-/G|frameshift_variant	49.536043120802724	0.308405419312776	4				NaN	NaN	0	NaN	5506	2900	8402
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8409	24.135	NaN	7534	30	0	1040.5	0.141				-1	LPDLCMTLD	9	80	539.2509029364284	1076.4872529396566	2	539.2518920898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_LPDLC(Carbamidomethyl (C))MTLD_	ENSG00000007202|ENST00000528896|BLTP2;nc|ENSG00000007202|Q14667-2|BLTP2	31.954861631926434	0.5046124803899898	4				NaN	NaN	0	NaN	5507	2900	8402
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8427	24.174	NaN	119480	30	0	69508	0.209				-1	 	0	94	349.8775178235186	1046.6107240707559	3	349.8780822753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5522	2903	8426
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8428	24.177	NaN	22541	30	0	5273	0.106				-1	 	0	72	430.7448530836686	859.4751532341372	2	430.7452697753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5523	2903	8426
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8429	24.179	NaN	18239	30	0	1686.7	0.106			+	9064	EGGKKVDGSI	10	91	495.2660180764387	988.5174832196774	2	495.2667236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EGGKKVDGSI_	REV__ENST00000440972.1_1_2:65659170-65659719:-|nuORF	68.84614121027924	0.2867470276772903	4				NaN	NaN	0	NaN	5524	2903	8426
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8430	24.181	NaN	22684	30	0	3274.6	0.106	+			34832	RYPDNLKHL	9	101	385.88048982371834	NaN	0	385.88055419921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RYPDNLKHL_	CCDC59|p.N163Ifs*5|1|0.04|ENSG00000133773|chr12:82354571-82354572|-/CCTAAATATA|frameshift_variant;ENSG00000133773|ENST00000256151|CCDC59;ENST00000406807.2_1_6:149812705-149813218:-|nuORF;ENST00000552606.1_1_12:82750710-82752155:-|nuORF	98.58198989935565	0.02429614701295995	4				NaN	NaN	0	NaN	5525	2903	8426
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8431	24.183	NaN	12746	30	0	2847.1	0.106	+			34247	RTGPPMGSRF	10	96	553.2815804342588	1104.5486079353175	2	553.282470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RTGPPMGSRF_	ENSG00000106682|ENST00000265753|EIF4H;nc|ENSG00000106682|Q15056-2|EIF4H	75.65223720490533	0.23114180991572172	4				NaN	NaN	0	NaN	5526	2903	8426
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8432	24.185	NaN	37832	30	0	9992.8	0.106				-1	 	0	90	422.7130773928554	843.4116018525108	2	422.7134094238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5527	2903	8426
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8433	24.186	NaN	13970	30	0	1140.4	0.035	+			51508	YVQQLKID	8	102	503.7820056897157	NaN	0	503.7820739746094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YVQQLKID_	ENSG00000054654|ENST00000555002|SYNE2;nc|ENSG00000054654|Q8WXH0|SYNE2;SYNE2|p.A5240Qfs*5|1|0.07|ENSG00000054654|chr14:64152639-64152639|G/-|frameshift_variant;SYNE2|p.D3074Ffs*8|1|0.07|ENSG00000054654|chr14:64053132-64053133|-/TTTCTTTTTCAAATACTTG|frameshift_variant;SYNE2|p.F2563Ifs*28|1|0.34|ENSG00000054654|chr14:64051593-64051594|-/A|frameshift_variant;SYNE2|p.F2840Lfs*3|1|0.38|ENSG00000054654|chr14:64052427-64052427|T/-|frameshift_variant;SYNE2|p.F4992Lfs*13|1|0.39|ENSG00000054654|chr14:64140067-64140067|T/-|frameshift_variant;SYNE2|p.K1189Sfs*4|1|0.35|ENSG00000054654|chr14:64000642-64000642|A/-|frameshift_variant;SYNE2|p.L5308Ifs*18|1|0.12|ENSG00000054654|chr14:64158750-64158751|GG/-|frameshift_variant;SYNE2|p.M1669Wfs*6|1|0.36|ENSG00000054654|chr14:64017707-64017707|A/-|frameshift_variant;SYNE2|p.N1656Mfs*19|1|0.18|ENSG00000054654|chr14:64017669-64017669|A/-|frameshift_variant;SYNE2|p.S1830Kfs*9|1|0.34|ENSG00000054654|chr14:64021985-64021986|-/A|frameshift_variant;SYNE2|p.S6651Rfs*83|1|0.29|ENSG00000054654|chr14:64220596-64220597|-/G|frameshift_variant	44.116797842482775	1.7418937515398478	4				NaN	NaN	0	NaN	5528	2903	8426
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8451	24.223	NaN	28284	30	0	3261.7	0.214				-1	 	0	89	424.2549025274901	846.4952521217803	2	424.2552185058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5543	2906	8450
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8452	24.227	NaN	59520	30	0	22649	0.106				-1	 	0	75	406.21843762106215	810.4223223089243	2	406.2188720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5544	2906	8450
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8453	24.229	NaN	24415	30	0	6570.4	0.106			+	10409	EVFYSLLNVL	10	69	399.5565410666137	1195.6477938000412	3	399.5570373535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EVFYSLLNVL_	REV__APOA2|p.F86L|1|0.23|ENSG00000158874|chr1:161222450-161222450|G/T|missense_variant	33.921630207806714	0.6028135429846169	4				NaN	NaN	0	NaN	5545	2906	8450
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8454	24.231	NaN	31590	30	0	4968.6	0.106	+			43233	TEVQKNQVL	9	84	529.7944701012129	1057.5743872692258	2	529.7945556640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TEVQKNQVL_	ENSG00000137364|ENST00000309983|TPMT;TPMT|p.F100Lfs*49|1|0.16|ENSG00000137364|chr6:18143662-18143662|A/-|frameshift_variant	82.7504851949679	0.08565546331141553	4				NaN	NaN	0	NaN	5546	2906	8450
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8455	24.233	NaN	26612	30	0	4347.5	0.106			+	26415	LTETTSASL	9	87	461.74001925179584	921.4654855703917	2	461.7403259277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LTETTSASL_	REV__COL12A1|p.F2273Lfs*20|1|0.26|ENSG00000111799|chr6:75124000-75124000|A/-|frameshift_variant;REV__COL12A1|p.G2777Wfs*37|1|0.15|ENSG00000111799|chr6:75102684-75102685|-/G|frameshift_variant;REV__COL12A1|p.G3027Wfs*19|1|0.1|ENSG00000111799|chr6:75087680-75087681|-/G|frameshift_variant;REV__COL12A1|p.I210Nfs*4|1|0.18|ENSG00000111799|chr6:75189581-75189582|-/T|frameshift_variant;REV__COL12A1|p.L2085Hfs*4|1|0.22|ENSG00000111799|chr6:75128382-75128383|-/T|frameshift_variant;REV__COL12A1|p.P2307Lfs*21|1|0.25|ENSG00000111799|chr6:75123356-75123356|G/-|frameshift_variant;REV__COL12A1|p.T1046Qfs*7|2|0.22|ENSG00000111799|chr6:75156372-75156372|G/-|frameshift_variant;REV__ENSG00000111799|ENST00000322507|COL12A1;REV__nc|ENSG00000111799|Q99715-4|COL12A1	44.116797842482775	0.37197099687881774	4				NaN	NaN	0	NaN	5547	2906	8450
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8456	24.234	NaN	10162	30	0	3010.6	0.106	+			50251	WPRRLRRASS	10	80	428.91831080512304	1283.7331030155692	3	428.9185791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_WPRRLRRASS_	ENST00000489456.1_1_2:220434036-220439523:+|nuORF;INHA|p.G66Afs*61|1|0.29|ENSG00000123999|chr2:219572566-219572566|G/-|frameshift_variant	26.063383197487333	0.6669871633831898	4				NaN	NaN	0	NaN	5548	2906	8450
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8457	24.236	NaN	7581.8	30	0	2748.2	0.033	+			16986	HPSGATPTL	9	50	440.7293378256291	879.4441227180582	2	440.7295227050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HPSGATPTL_	ARID1B|p.K1095Rfs*9|1|0.39|ENSG00000049618|chr6:157181155-157181156|AA/-|frameshift_variant;ARID1B|p.P722Hfs*10|1|0.36|ENSG00000049618|chr6:157084826-157084826|C/-|frameshift_variant;ENSG00000049618|ENST00000636930|ARID1B;nc|ENSG00000049618|Q8NFD5-1|ARID1B;nc|ENSG00000049618|Q8NFD5-2|ARID1B;nc|ENSG00000049618|Q8NFD5|ARID1B	63.30626980617807	0.18605348971131092	4				NaN	NaN	0	NaN	5549	2906	8450
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8475	24.272	NaN	148160	30	0	55896	0.17				-1	 	0	64	334.2008594118995	999.5807488358985	3	334.20135498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5564	2909	8474
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8476	24.275	NaN	45207	30	0	4754.9	0.106				-1	 	0	93	502.25562565103047	1002.496698368861	2	502.2561950683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5565	2909	8474
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8477	24.277	NaN	106720	30	0	63308	0.106				-1	 	0	96	430.2653509978032	858.5161490624064	2	430.2657470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5566	2909	8474
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8478	24.279	NaN	150140	30	0	27670	0.106	+			5455	ATYSVGMQK	9	110	492.7439988611637	983.4734447891274	2	492.74432373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATYSVGMQK_	ENSG00000131941|ENST00000254260|RHPN2;ENST00000592247.1_1_19:33470904-33481620:-|nuORF;nc|ENSG00000131941|Q8IUC4-2|RHPN2;nc|ENSG00000258628|A8MT19|RHPN2P1	215.3904343047913	3.137872006661207E-08	4				NaN	NaN	0	NaN	5567	2909	8474
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8479	24.281	NaN	118790	30	0	58395	0.106	+			27978	MVMIMASVGFV	11	100	608.7918281107569	1215.5691032883137	2	608.7925415039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Oxidation (M)	_M(Oxidation (M))VM(Oxidation (M))IMASVGFV_	ENST00000603963.1_1_12:120902595-120903561:-|nuORF	71.29570347882199	0.22493784351096352	4				NaN	NaN	0	NaN	5568	2909	8474
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8480	24.282	NaN	42473	30	0	8668.2	0.106	+			44353	TSHQPLLPAPP	11	94	386.5485683531029	1156.6238756595087	3	386.54864501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TSHQPLLPAPP_	ENSG00000183060|ENST00000684762|LYSMD4;nc|ENSG00000183060|Q5XG99-2|LYSMD4	35.61828744233558	0.616184410043185	4				NaN	NaN	0	NaN	5569	2909	8474
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8481	24.284	NaN	33099	30	0	4896.9	0.037			+	38627	SSGYFCQPKE	10	86	573.2508333948737	1144.4871138565472	2	573.2520141601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSGYFCQPKE_	REV__ENSG00000149557|ENST00000278919|FEZ1;REV__ENST00000392709.8_1_11:125325619-125359673:-|nuORF;REV__ENST00000532981.1_1_11:125333376-125359673:-|nuORF;REV__nc|ENSG00000149557|Q99689-2|FEZ1	56.72105179125745	0.3956618550748046	4				NaN	NaN	0	NaN	5570	2909	8474
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8499	24.32	NaN	51264	30	0	5132.6	0.214				-1	 	0	96	516.3027471496916	1030.5909413661832	2	516.3034057617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5585	2912	8498
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8500	24.323	NaN	52498	30	0	10663	0.106	+			39859	STLNVGVNK	9	92	466.2628828705456	930.5112128078912	2	466.26361083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STLNVGVNK_	AGBL5|p.R813Gfs*68|1|0.4|ENSG00000084693|chr2:27069649-27069649|C/-|frameshift_variant;ENSG00000084693|ENST00000360131|AGBL5;nc|ENSG00000084693|Q8NDL9-2|AGBL5;nc|ENSG00000084693|Q8NDL9-3|AGBL5	229.3272233562966	7.724902870478276E-13	4				NaN	NaN	0	NaN	5586	2912	8498
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8501	24.325	NaN	24376	30	0	4040	0.106				-1	 	0	86	475.24478316225327	948.4750133913066	2	475.2450256347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5587	2912	8498
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8502	24.327	NaN	29862	30	0	4515.7	0.106	+			39353	STCIYGGAPK	10	87	527.2548472888946	1052.495141644589	2	527.2554931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_STC(Carbamidomethyl (C))IYGGAPK_	DDX5|p.D424Ifs*31|1|0.03|ENSG00000108654|chr17:64500720-64500721|-/AAGCAATTAAT|frameshift_variant;DDX5|p.D572Nfs*6|1|0.04|ENSG00000108654|chr17:64500054-64500055|-/TGACAAGATAGTT|frameshift_variant;DDX5|p.R502Gfs*87|1|0.21|ENSG00000108654|chr17:64500264-64500264|T/-|frameshift_variant;ENSG00000100201|ENST00000403230|DDX17;ENSG00000108654|ENST00000225792|DDX5;ENST00000216019.11_1_22:38888049-38902242:-|nuORF;ENST00000432525.5_1_22:38886367-38903636:-|nuORF;ENST00000581230.5_1_17:62498125-62502378:-|nuORF;ENST00000583894.1_1_17:62499542-62500133:-|nuORF;nc|ENSG00000100201|Q92841-1|DDX17;nc|ENSG00000100201|Q92841-2|DDX17;nc|ENSG00000100201|Q92841-3|DDX17;nc|ENSG00000108654|P17844-2|DDX5	136.26810882979174	0.01174908900087339	4				NaN	NaN	0	NaN	5588	2912	8498
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8503	24.329	NaN	181070	30	0	38056	0.106	+			14726	GTISAITSK	9	98	439.25256745453174	876.4905819758635	2	439.2528076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTISAITSK_	ENSG00000145113|ENST00000463781|MUC4;MUC4|p.L3985Ffs*274|1|0.3|ENSG00000145113|chr3:195779627-195779627|G/-|frameshift_variant;MUC4|p.N4902Tfs*8|1|0.37|ENSG00000145113|chr3:195761027-195761027|T/-|frameshift_variant;nc|ENSG00000145113|Q99102-10|MUC4;nc|ENSG00000145113|Q99102-11|MUC4;nc|ENSG00000145113|Q99102-15|MUC4;nc|ENSG00000145113|Q99102-16|MUC4;nc|ENSG00000145113|Q99102-17|MUC4;nc|ENSG00000145113|Q99102-2|MUC4;nc|ENSG00000145113|Q99102-3|MUC4;nc|ENSG00000145113|Q99102-5|MUC4;nc|ENSG00000145113|Q99102-7|MUC4;nc|ENSG00000145113|Q99102-8|MUC4;nc|ENSG00000145113|Q99102-9|MUC4	176.44474024533739	0.0016668318535579616	4				NaN	NaN	0	NaN	5589	2912	8498
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8504	24.331	NaN	13839	30	0	1817.1	0.036	+			20587	KFYHCINT	8	83	541.7582748328016	1081.501996732403	2	541.7593994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_KFYHC(Carbamidomethyl (C))INT_	ENSG00000144285|ENST00000674923|SCN1A;nc|ENSG00000144285|P35498-2|SCN1A;nc|ENSG00000144285|P35498-3|SCN1A	79.45101966838831	0.3281480470254892	4				NaN	NaN	0	NaN	5590	2912	8498
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8505	24.331	NaN	58837	30	0	23021	0.145				-1	 	0	106	365.544494115937	1093.6116529480112	3	365.5448913574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5591	2912	8498
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8523	24.371	NaN	113270	30	0	15481	0.184	+			23257	KYISKPENL	9	95	546.3076496686447	1090.6007464040893	2	546.30859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KYISKPENL_	ENSG00000102547|ENST00000409308|CAB39L;ENSG00000135932|ENST00000258418|CAB39;ENST00000493540.1_1_2:231678823-231682621:+|nuORF	159.27591364854348	0.004707062175358555	4				NaN	NaN	0	NaN	5606	2915	8522
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8524	24.374	NaN	123210	30	0	17157	0.106			+	50191	WLPLRAACGPS	11	113	585.8083410303238	1169.6021291274476	2	585.809326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WLPLRAACGPS_	REV__ENST00000545703.5_1_X:117079506-117250600:-|nuORF	66.9202029811203	0.26168278700588427	4				NaN	NaN	0	NaN	5607	2915	8522
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8525	24.376	NaN	13180	30	0	1384.4	0.106	+			11972	FVNDDRHVM	9	72	566.7627568192798	1131.5109607053596	2	566.76416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FVNDDRHVM_	ENSG00000129351|ENST00000588657|ILF3;ENST00000587928.5_1_19:10781281-10792148:+|nuORF;nc|ENSG00000129351|Q12906-2|ILF3;nc|ENSG00000129351|Q12906-3|ILF3;nc|ENSG00000129351|Q12906-4|ILF3;nc|ENSG00000129351|Q12906-5|ILF3;nc|ENSG00000129351|Q12906-6|ILF3;nc|ENSG00000129351|Q12906|ILF3	88.17693792209575	0.07000514020414955	4				NaN	NaN	0	NaN	5608	2915	8522
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8526	24.378	NaN	13293	30	0	821.27	0.106			+	8954	EFAQGVTSIIS	11	84	576.301137457625	1150.58772198205	2	576.3015747070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EFAQGVTSIIS_	REV__ENSG00000129946|ENST00000264554|SHC2;REV__ENST00000590113.4_1_19:435948-439002:-|nuORF	93.5975768576971	0.08404719173293068	4				NaN	NaN	0	NaN	5609	2915	8522
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8527	24.379	NaN	44538	30	0	9558.1	0.106	+			14468	GTCFGKFTK	9	101	523.2607537607151	1044.5069545882302	2	523.2628173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_GTC(Carbamidomethyl (C))FGKFTK_	ENSG00000132603|ENST00000254940|NIP7;ENST00000565034.1_1_16:69373956-69375289:+|nuORF;nc|ENSG00000132603|Q9Y221-2|NIP7	96.0336014099291	0.047854655524928534	4				NaN	NaN	0	NaN	5610	2915	8522
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8528	24.381	NaN	14173	30	0	5525.1	0.106			+	32532	QVRLYAKVK	9	83	368.90109912796805	NaN	0	368.901123046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QVRLYAKVK_	REV__ENSG00000132821|ENST00000373461|VSTM2L;REV__nc|ENSG00000132821|Q96N03-2|VSTM2L	39.252832667884924	0.27938773122138094	4				NaN	NaN	0	NaN	5611	2915	8522
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8529	24.383	NaN	12357	30	0	2398.9	0.038	+			11011	FEKDVKGESL	10	75	384.5361895557172	1150.5867392673517	3	384.5362243652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FEKDVKGESL_	ENSG00000119888|ENST00000263735|EPCAM	26.69291269510374	0.6618461711292317	4				NaN	NaN	0	NaN	5612	2915	8522
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8547	24.421	NaN	171910	30	0	33636	0.114	+			40922	SVFQTTDTK	9	79	513.7581536420843	1025.5017543509684	2	513.7586669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVFQTTDTK_	ENSG00000153130|ENST00000608372|SCOC;nc|ENSG00000153130|Q9UIL1-2|SCOC;nc|ENSG00000153130|Q9UIL1-3|SCOC;nc|ENSG00000153130|Q9UIL1-4|SCOC;nc|ENSG00000153130|Q9UIL1|SCOC	187.50397467658743	0.0005427347354732084	4				NaN	NaN	0	NaN	5627	2918	8546
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8548	24.423	NaN	303700	30	0	74566	0.106	+			28202	NASRDQVVY	9	84	526.2613577187691	1050.508162504338	2	526.2623901367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NASRDQVVY_	ENSG00000167608|ENST00000619895|TMC4;nc|ENSG00000167608|Q7Z404-1|TMC4;nc|ENSG00000167608|Q7Z404|TMC4;TMC4|p.F240Lfs*221|1|0.42|ENSG00000167608|chr19:54168267-54168268|AA/-|frameshift_variant;TMC4|p.Q383Rfs*6|1|0.37|ENSG00000167608|chr19:54163872-54163872|G/-|frameshift_variant	83.6470233535746	0.08277643980271215	4				NaN	NaN	0	NaN	5628	2918	8546
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8549	24.424	NaN	45875	30	0	3336.6	0.106	+			10398	EVEKSLVLAEK	11	110	415.5746484953946	1243.702116086384	3	415.5750427246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EVEKSLVLAEK_	ENSG00000112159|ENST00000369393|MDN1;MDN1|p.E2692*|2|0.32|ENSG00000112159|chr6:89706133-89706134|-/A|frameshift_variant;MDN1|p.F2691Lfs*7|2|0.37|ENSG00000112159|chr6:89706134-89706134|A/-|frameshift_variant;MDN1|p.K2642Nfs*17|2|0.29|ENSG00000112159|chr6:89707449-89707449|T/-|frameshift_variant;MDN1|p.L4077Cfs*15|1|0.16|ENSG00000112159|chr6:89680625-89680625|G/-|frameshift_variant;MDN1|p.L5278Ffs*6|1|0.18|ENSG00000112159|chr6:89652273-89652274|-/A|frameshift_variant	73.90049950687481	0.20322248490973555	4				NaN	NaN	0	NaN	5629	2918	8546
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8550	24.426	NaN	54832	30	0	14545	0.106	+			5852	AVIPNCGTPK	10	90	528.7779699239577	1055.5413869147153	2	528.7791748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_AVIPNC(Carbamidomethyl (C))GTPK_	ENSG00000168386|ENST00000477258|FILIP1L;nc|ENSG00000168386|Q4L180-2|FILIP1L;nc|ENSG00000168386|Q4L180-3|FILIP1L;nc|ENSG00000168386|Q4L180-5|FILIP1L;nc|ENSG00000168386|Q4L180-6|FILIP1L;nc|ENSG00000168386|Q4L180-7|FILIP1L;nc|ENSG00000168386|Q4L180|FILIP1L	65.46538089061403	0.31613324008013116	4				NaN	NaN	0	NaN	5630	2918	8546
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8551	24.428	NaN	21759	30	0	1209.5	0.106	+			36228	SELVQKAKL	9	85	508.31009486378616	1014.6056367943723	2	508.3107604980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SELVQKAKL_	ENSG00000166913|ENST00000353703|YWHAB;nc|ENSG00000166913|P31946-2|YWHAB	104.01359247289065	0.03510646158778409	4				NaN	NaN	0	NaN	5631	2918	8546
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8552	24.43	NaN	28836	30	0	7874.6	0.106	+			34365	RTQMPDPKTFK	11	91	450.23886104009114	1347.6947537204735	3	450.2384338378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RTQMPDPKTFK_	ENSG00000120963|ENST00000311212|ZNF706	49.280055037864464	0.43096356235087463	4				NaN	NaN	0	NaN	5632	2918	8546
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8553	24.432	NaN	10746	30	0	3462	0.036				-1	GVWTNPVLC	9	53	349.17538091125095	1044.504313333953	3	349.1759948730469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_GVWTNPVLC(Carbamidomethyl (C))_	ZNF292|p.K162T|1|0.38|ENSG00000188994|chr6:87218678-87218678|A/C|missense_variant	34.172542307311794	0.4838870758800184	4				NaN	NaN	0	NaN	5633	2918	8546
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8554	24.432	NaN	4682.4	30	0	1938.5	0.139			+	19701	KDSKPTRE	8	66	480.7603997619113	959.5062465906226	2	480.76092529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_KDSKPTRE_	REV__ENSG00000125676|ENST00000245838|THOC2;REV__nc|ENSG00000125676|Q8NI27-2|THOC2	42.396135135203025	0.6414440140393314	4				NaN	NaN	0	NaN	5634	2918	8546
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8568	24.471	NaN	60179	30	0	7009.8	0.181				-1	 	0	97	465.78965325491845	929.5647535766369	2	465.7900085449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5645	2921	8567
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8569	24.474	NaN	19591	30	0	2961.9	0.106	+			42231	TAALAHTSY	9	89	467.73472327839403	933.4548936235881	2	467.73480224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAALAHTSY_	ENSG00000205277|ENST00000536621|MUC12;nc|ENSG00000205277|Q9UKN1|MUC12	134.81075121484326	0.012914550297035062	4				NaN	NaN	0	NaN	5646	2921	8567
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8570	24.476	NaN	34831	30	0	8150.4	0.106				-1	 	0	81	520.2375585027409	1038.4605640722816	2	520.2384643554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5647	2921	8567
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8571	24.478	NaN	33876	30	0	7774.9	0.106	+			41965	SVWHGTLSK	9	99	507.7712657319635	1013.5279785307271	2	507.7721252441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVWHGTLSK_	ENSG00000136270|ENST00000258770|TBRG4;nc|ENSG00000136270|Q969Z0-2|TBRG4;TBRG4|p.L492Cfs*9|2|0.32|ENSG00000136270|chr7:45101918-45101918|G/-|frameshift_variant	124.08010499294276	0.018729767491916592	4				NaN	NaN	0	NaN	5648	2921	8567
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8572	24.48	NaN	23601	30	0	3262.8	0.106	+			34848	RYQKSTELL	9	87	569.3153359642824	1136.6161189953648	2	569.3167724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RYQKSTELL_	ENSG00000132475|ENST00000254810|H3-3B;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000168148|ENST00000366696|H3-4;ENSG00000183598|ENST00000331491|H3C13;ENSG00000188375|ENST00000340398|H3-5;ENSG00000197153|ENST00000359303|H3C12;ENSG00000197409|ENST00000356476|H3C4;ENSG00000203811|ENST00000369158|H3C14;ENSG00000203852|ENST00000403683|H3C15;ENSG00000273983|ENST00000614378|H3C8;ENSG00000274750|ENST00000614911|H3C6;ENSG00000275379|ENST00000616365|H3C11;ENSG00000275714|ENST00000613854|H3C1;ENSG00000277775|ENST00000618052|H3C7;ENSG00000278828|ENST00000685041|H3C10;ENST00000401004.2_1:120904811-120905087:+|nuORF;ENST00000586518.1_1_17:73774674-73775034:-|nuORF;nc|ENSG00000273213|Q5TEC6|H3-7	117.5257442709337	0.022697614825424036	4				NaN	NaN	0	NaN	5649	2921	8567
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8573	24.482	NaN	23983	30	0	5348.8	0.106			+	46472	VETFLHRP	8	78	499.7758117877994	997.5370706423988	2	499.7760314941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VETFLHRP_	REV__ENST00000513421.5_1_4:54457561-54482691:-|nuORF	37.15910966729921	0.6739408393984688	4				NaN	NaN	0	NaN	5650	2921	8567
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8574	24.483	NaN	36716	30	0	4589.7	0.035	+			51358	YTAPPLQSK	9	99	502.77364653395176	1003.5327401347035	2	502.7742614746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YTAPPLQSK_	ENSG00000155008|ENST00000373173|APOOL	66.9202029811203	0.15592758990009112	4				NaN	NaN	0	NaN	5651	2921	8567
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8592	24.521	NaN	92942	30	0	10183	0.215	+			3598	ASVNTLVNK	9	111	473.27164472570956	944.5287365182191	2	473.2716369628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASVNTLVNK_	ARFIP1|p.K303Nfs*13|1|0.22|ENSG00000164144|chr4:152888246-152888246|A/-|frameshift_variant;ENSG00000164144|ENST00000353617|ARFIP1;nc|ENSG00000164144|P53367-2|ARFIP1;nc|ENSG00000164144|P53367-3|ARFIP1	159.27591364854348	0.004707062175358555	4				NaN	NaN	0	NaN	5666	2924	8591
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8593	24.525	NaN	18966	30	0	2714.8	0.106				-1	 	0	72	398.7735009210743	795.5324489089486	2	398.7737731933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5667	2924	8591
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8594	24.527	NaN	205320	30	0	43034	0.106	+			45172	TVMDKTRAL	9	123	517.7860987512223	1033.5576445692445	2	517.7870483398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVMDKTRAL_	CARD17-CASP1|1|fusion;CARD17-CASP1|2|fusion;CASP1|p.N205Ifs*7|1|0.4|ENSG00000137752|chr11:105030343-105030343|T/-|frameshift_variant;ENSG00000137752|ENST00000533400|CASP1;ENSG00000204397|ENST00000673097|CARD16;ENST00000526511.5_1_11:104901858-104905840:-|nuORF;ENST00000527065.1_1_11:104915107-104915377:-|nuORF;nc|ENSG00000137752|P29466-2|CASP1;nc|ENSG00000204397|Q5EG05|CARD16	120.30596017624542	0.02101454110788768	4				NaN	NaN	0	NaN	5668	2924	8591
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8595	24.529	NaN	47467	30	0	7840.9	0.106	+			33676	RNPIYTVR	8	108	509.79310119854546	1017.5716494638909	2	509.79351806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RNPIYTVR_	DLG5|p.F1661Ifs*9|1|0.12|ENSG00000151208|chr10:77805849-77805850|-/C|frameshift_variant;ENSG00000151208|ENST00000372391|DLG5;ENST00000459739.5_1_10:79567604-79581271:-|nuORF;ENST00000463362.5_1_10:79552200-79579794:-|nuORF;ENST00000475613.6_1_10:79552200-79579275:-|nuORF;ENST00000476354.2_1_10:79575932-79579275:-|nuORF;nc|ENSG00000151208|Q8TDM6-2|DLG5;nc|ENSG00000151208|Q8TDM6-4|DLG5	79.45101966838831	0.3281480470254892	4				NaN	NaN	0	NaN	5669	2924	8591
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8596	24.531	NaN	13477	30	0	1210.4	0.106			+	34227	RTFSSQME	8	83	493.22358588127435	984.4326188293487	2	493.2239685058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RTFSSQME_	REV__ENSG00000087206|ENST00000511320|UIMC1;REV__ENST00000510376.1_1_5:176332285-176333139:-|nuORF;REV__nc|ENSG00000087206|Q96RL1-2|UIMC1;REV__nc|ENSG00000087206|Q96RL1-3|UIMC1;REV__nc|ENSG00000087206|Q96RL1-4|UIMC1	60.11826168202944	0.5006107059937851	4				NaN	NaN	0	NaN	5670	2924	8591
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8597	24.533	NaN	7740	30	0	1628	0.039			+	-1	RMASPRIDNMA	11	83	647.3060003379824	1292.5974477427646	2	647.3072509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Oxidation (M)	_RM(Oxidation (M))ASPRIDNM(Oxidation (M))A_	REV__ENSG00000145375|ENST00000274008|SPATA5;REV__ENST00000422835.2_1_4:123844270-124023368:+|nuORF;REV__nc|ENSG00000145375|Q8NB90-2|AFG2A;REV__nc|ENSG00000145375|Q8NB90-3|AFG2A	51.19269402634007	0.4047928213175833	4				NaN	NaN	0	NaN	5671	2924	8591
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8598	24.533	NaN	19109	30	0	2487.9	0.141				-1	 	0	85	428.2680539705688	854.5215550079376	2	428.2685241699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5672	2924	8591
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8615	24.571	NaN	151350	30	0	82738	0.17			+	-1	LSCVRSLSL	9	82	345.52662737795526	1033.5580527340658	3	345.5269775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_LSC(Carbamidomethyl (C))VRSLSL_	REV__ENST00000344111.3_1_7:1007687-1008335:-|nuORF	60.11826168202944	0.21262886028301267	4				NaN	NaN	0	NaN	5686	2927	8614
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8616	24.573	NaN	9644	30	0	1441	0.106			+	7903	DSAKTLVQK	9	67	495.2842704846295	988.553988036059	2	495.2847900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DSAKTLVQK_	REV__ENSG00000185775|ENST00000332857|SPATA31A6;REV__ENSG00000204849|ENST00000377647|SPATA31A1;REV__ENSG00000275969|ENST00000428649|SPATA31A3;REV__ENSG00000276040|ENST00000619167|SPATA31A7;REV__ENSG00000276581|ENST00000437823|SPATA31A5;REV__SPATA31A1|p.T1192Nfs*14|1|0.28|ENSG00000204849|chr9:39361333-39361334|-/A|frameshift_variant;REV__SPATA31A1|p.T1192Qfs*2|2|0.24|ENSG00000204849|chr9:39361334-39361334|A/-|frameshift_variant;REV__SPATA31A3|p.S1180Kfs*9|1|0.25|ENSG00000275969|chr9:66986959-66986960|-/T|frameshift_variant;REV__SPATA31A6|p.N1191Tfs*16|1|0.12|ENSG00000185775|chr9:42189269-42189269|A/-|frameshift_variant;REV__SPATA31A6|p.T1188Qfs*2|1|0.26|ENSG00000185775|chr9:42189259-42189259|A/-|frameshift_variant	75.04331003522576	0.118981335847003	4				NaN	NaN	0	NaN	5687	2927	8614
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8617	24.576	NaN	14076	30	0	3420.3	0.106				-1	 	0	67	379.7419583923513	757.4693638515026	2	379.74212646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5688	2927	8614
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8618	24.577	NaN	7309.1	30	0	4125.9	0.106			+	-1	LTGRMHMRSPP	11	63	433.5535061761209	1297.6386891285626	3	433.5539245605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_LTGRM(Oxidation (M))HMRSPP_	REV__ENST00000573951.1_1_16:3313772-3314576:+|nuORF	21.0322348234405	0.7691802065814517	4				NaN	NaN	0	NaN	5689	2927	8614
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8619	24.579	NaN	3356.7	30	0	242.51	0.106	+			22938	KVQEMNYIQK	10	79	640.8362345047159	1279.6579160762317	2	640.8373413085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KVQEMNYIQK_	ENSG00000068366|ENST00000672401|ACSL4;nc|ENSG00000068366|O60488|ACSL4	120.30596017624542	0.026897611020491978	4				NaN	NaN	0	NaN	5690	2927	8614
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8620	24.581	NaN	7787.1	30	0	2330.7	0.106	+			30496	QAFESSQKY	9	87	544.2563403314731	1086.498127729746	2	544.2569580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QAFESSQKY_	ENSG00000090238|ENST00000398841|YPEL3;ENST00000565479.5_1_16:30104033-30107516:-|nuORF;nc|ENSG00000090238|P61236|YPEL3	95.81516180277367	0.04847050768394289	4				NaN	NaN	0	NaN	5691	2927	8614
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8621	24.583	NaN	5793.8	30	0	1333.9	0.039			+	40327	STSVVAKRQKR	11	59	420.5901360799493	1258.748578840048	3	420.5904235839844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STSVVAKRQKR_	REV__ENSG00000132334|ENST00000254667|PTPRE;REV__nc|ENSG00000132334|P23469-2|PTPRE	23.37791116691581	0.7445759747191538	4				NaN	NaN	0	NaN	5692	2927	8614
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8639	24.621	NaN	14386	30	0	2233	0.215	+			34911	SAAELRHVM	9	85	507.262764944058	1012.510976954916	2	507.2634582519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAAELRHVM_	CALML3|p.E115Rfs*3|1|0.35|ENSG00000178363|chr10:5525424-5525424|G/-|frameshift_variant;ENSG00000143933|ENST00000272298|CALM2;ENSG00000160014|ENST00000291295|CALM3;ENSG00000178363|ENST00000315238|CALML3;ENSG00000198668|ENST00000356978|CALM1;ENST00000482532.5_1_2:47387917-47389823:-|nuORF;ENST00000597868.5_1_19:47111871-47112407:+|nuORF	47.95952297671804	0.32689736945648856	4				NaN	NaN	0	NaN	5707	2930	8638
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8640	24.624	NaN	15120	30	0	2020.4	0.106			+	9310	EIDEENKPQ	9	82	551.2560728148115	1100.497592696423	2	551.2568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EIDEENKPQ_	REV__ENSG00000156738|ENST00000345732|MS4A1;REV__nc|ENSG00000156738|P11836-2|MS4A1	71.87747018426188	0.13267044672804276	4				NaN	NaN	0	NaN	5708	2930	8638
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8641	24.627	NaN	14256	30	0	1343.9	0.106	+			2940	ASDPHIIIK	9	88	497.2897008090664	992.5648486849328	2	497.2901306152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASDPHIIIK_	ENSG00000134313|ENST00000256707|KIDINS220;ENST00000488729.5_1_2:8870852-8965899:-|nuORF;KIDINS220|p.K1581Rfs*8|1|0.28|ENSG00000134313|chr2:8731294-8731294|T/-|frameshift_variant;KIDINS220|p.P1081Rfs*48|1|0.22|ENSG00000134313|chr2:8750284-8750284|G/-|frameshift_variant;KIDINS220|p.R1551Efs*38|1|0.08|ENSG00000134313|chr2:8731386-8731386|C/-|frameshift_variant;nc|ENSG00000134313|Q9ULH0-2|KIDINS220;nc|ENSG00000134313|Q9ULH0-3|KIDINS220;nc|ENSG00000134313|Q9ULH0-4|KIDINS220	75.04331003522576	0.118981335847003	4				NaN	NaN	0	NaN	5709	2930	8638
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8642	24.628	NaN	9955.3	30	0	1072.8	0.106			+	-1	SMANIQLH	8	73	465.2311801912475	NaN	0	465.2275695800781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_SM(Oxidation (M))ANIQLH_	REV__PHKB|p.V175M|1|0.37|ENSG00000102893|chr16:47515530-47515530|G/A|missense_variant	37.15910966729921	1.7418937515398478	4				NaN	NaN	0	NaN	5710	2930	8638
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8643	24.63	NaN	6496.1	30	0	866.49	0.106	+			46059	VCGRPGAAL	9	60	422.228891237497	842.443229541794	2	422.2286376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VCGRPGAAL_	ENSG00000089063|ENST00000342308|TMEM230;ENST00000202834.11_1_20:5090072-5093674:-|nuORF;ENST00000379299.6_1_20:5093602-5093659:-|nuORF	55.50420428727701	0.2510918378945873	4				NaN	NaN	0	NaN	5711	2930	8638
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8644	24.632	NaN	18471	30	0	6363.6	0.036			+	37637	SLQKPSKNY	9	76	532.7898121284952	1063.5650713237903	2	533.7930297851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLQKPSKNY_	REV__ENSG00000213096|ENST00000357002|ZNF254;REV__nc|ENSG00000213096|O75437-2|ZNF254	71.87747018426188	0.13267044672804276	4				NaN	NaN	0	NaN	5712	2930	8638
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8645	24.633	NaN	6135.1	30	0	1066	0.143	+			21337	KLVKAAGFSS	10	61	336.53385173438676	1006.5797258033604	3	336.5342712402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KLVKAAGFSS_	ENSG00000067248|ENST00000251636|DHX29;ENST00000504778.5_1_5:54552318-54579000:-|nuORF	20.94693142431847	0.7087701759873708	4				NaN	NaN	0	NaN	5713	2930	8638
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8662	24.67	NaN	23580	30	0	2307.9	0.214	+			26135	LSPRYDPDSG	10	87	553.7587681634088	1105.5029833936176	2	553.7597045898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSPRYDPDSG_	TRIM46|p.I626L|1|0.27|ENSG00000163462|chr1:155182139-155182139|A/C|missense_variant	47.657333605630114	0.47858658696240314	4				NaN	NaN	0	NaN	5727	2933	8661
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8663	24.674	NaN	22207	30	0	4077.3	0.106	+			23163	KVYNGILEK	9	94	532.3106095844572	1062.6066662357143	2	532.3113403320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVYNGILEK_	ENSG00000109689|ENST00000467087|STIM2;ENST00000467011.5_1_4:27022655-27024615:+|nuORF;nc|ENSG00000109689|Q9P246-2|STIM2;STIM2|p.S735Lfs*9|1|0.08|ENSG00000109689|chr4:27022958-27022959|-/TGTA|frameshift_variant	120.8684288430529	0.02067403653475984	4				NaN	NaN	0	NaN	5728	2933	8661
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8664	24.676	NaN	18551	30	0	2820.4	0.106	+			12775	GELPEHAKI	9	98	497.2706705338592	992.5267881345184	2	497.2718505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GELPEHAKI_	ENSG00000173674|ENST00000379607|EIF1AX;ENSG00000198692|ENST00000361365|EIF1AY;ENST00000485584.1_1_Y:22749894-22754229:+|nuORF	93.1432384553994	0.056003526918089595	4				NaN	NaN	0	NaN	5729	2933	8661
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8665	24.678	NaN	12149	30	0	1537.9	0.106	+			20862	KIMKDILEK	9	81	559.335384853355	1116.6562167735099	2	559.3365478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KIMKDILEK_	ENSG00000080824|ENST00000216281|HSP90AA1;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1	195.57289506066198	5.204600901213804E-05	4				NaN	NaN	0	NaN	5730	2933	8661
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8666	24.68	NaN	6490.5	30	0	907.29	0.106	+			3295	ASLSGSLSAK	10	78	460.7557076209175	919.4968623086351	2	460.7558898925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASLSGSLSAK_	ENST00000588822.1_1_17:74723429-74729181:+|nuORF;ENST00000589977.5_1_17:74725800-74729181:+|nuORF;ENST00000590964.5_1_17:74722977-74729181:+|nuORF	53.08895987439943	0.42869529153390606	4				NaN	NaN	0	NaN	5731	2933	8661
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8667	24.681	NaN	6088.2	30	0	2663.8	0.037			+	32232	QTERDKELE	9	68	574.2842703563866	1146.5539877795732	2	574.2854614257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QTERDKELE_	REV__ENSG00000126001|ENST00000397527|CEP250;REV__nc|ENSG00000126001|Q9BV73-2|CEP250	74.25504064058377	0.12238981753128622	4				NaN	NaN	0	NaN	5732	2933	8661
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8668	24.682	NaN	6240.2	30	0	903.33	0.145			+	8709	EEDERNSRL	9	61	383.1823199786664	1146.5251305361992	3	383.1923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EEDERNSRL_	REV__ENST00000530485.1_1_1:32849551-32859717:-|nuORF	30.503639358989545	0.5181749237905803	4				NaN	NaN	0	NaN	5733	2933	8661
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8686	24.722	NaN	34706	30	0	2635.3	0.215	+			43925	TPAGVVNKY	9	107	474.76051597951704	947.5064790258341	2	474.7609558105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TPAGVVNKY_	ENSG00000172893|ENST00000355527|DHCR7	139.97047562133406	0.010493916756945389	4				NaN	NaN	0	NaN	5748	2936	8685
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8687	24.726	NaN	25650	30	0	4062.2	0.106	+			45094	TVIHFNNPK	9	89	535.2928410891831	1068.571129245166	2	535.2938842773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVIHFNNPK_	ENSG00000134717|ENST00000313334|BTF3L4;ENSG00000145741|ENST00000380591|BTF3;ENST00000418879.1_1_6:137865036-137865375:-|nuORF;nc|ENSG00000134717|Q96K17-2|BTF3L4;nc|ENSG00000145741|P20290-2|BTF3	120.30596017624542	0.02101454110788768	4				NaN	NaN	0	NaN	5749	2936	8685
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8688	24.728	NaN	29962	30	0	4042.4	0.106			+	21183	KLANMMPYL	9	91	540.7819435297695	1079.5493341263389	2	540.7818603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KLANMMPYL_	REV__ENSG00000117139|ENST00000367265|KDM5B;REV__KDM5B|p.D740V|1|0.37|ENSG00000117139|chr1:202745962-202745962|T/A|missense_variant;REV__nc|ENSG00000117139|Q9UGL1-2|KDM5B	45.9519527083369	0.35044536499095585	4				NaN	NaN	0	NaN	5750	2936	8685
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8689	24.73	NaN	43699	30	0	5071.7	0.106	+			37151	SITYHSSI	8	93	454.2315144090993	906.4484758849986	2	454.233154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SITYHSSI_	ENSG00000007202|ENST00000528896|BLTP2;nc|ENSG00000007202|Q14667-2|BLTP2	79.9392285194092	0.32408006123154964	4				NaN	NaN	0	NaN	5751	2936	8685
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8690	24.731	NaN	12002	30	0	1901.6	0.106	+			47325	VPAEHQVAM	9	75	491.24461103350524	980.4746691338105	2	491.24462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VPAEHQVAM_	ENSG00000196943|ENST00000267425|NOP9;nc|ENSG00000196943|Q86U38-2|NOP9	79.71258880314673	0.09879134589249085	4				NaN	NaN	0	NaN	5752	2936	8685
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8691	24.733	NaN	22002	30	0	6018.1	0.034	+			41777	SVSPGLYSK	9	79	469.2527059106347	936.4908588880694	2	469.2529602050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVSPGLYSK_	ENSG00000101311|ENST00000217289|FERMT1;nc|ENSG00000101311|Q9BQL6-2|FERMT1;nc|ENSG00000101311|Q9BQL6-4|FERMT1	65.15724298150197	0.17062369902793603	4				NaN	NaN	0	NaN	5753	2936	8685
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8692	24.734	NaN	9521.8	30	0	1792.1	0.139			+	9092	EGIRNESL	8	72	459.238250689114	916.461948445028	2	459.2378234863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EGIRNESL_	REV__ENSG00000177311|ENST00000321464|ZBTB38	87.69643885390035	0.28444366722805053	4				NaN	NaN	0	NaN	5754	2936	8685
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8709	24.772	NaN	102160	30	0	9384.8	0.182				-1	 	0	77	561.312989825974	1120.611426718748	2	561.3139038085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5768	2939	8708
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8710	24.775	NaN	40004	30	0	6516.7	0.106	+			10734	FAEDGARTV	9	78	483.23774031807045	964.4609277029409	2	483.2377624511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FAEDGARTV_	ENSG00000157240|ENST00000287934|FZD1	101.45984612302182	0.0377122763612125	4				NaN	NaN	0	NaN	5769	2939	8708
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8711	24.777	NaN	16895	30	0	2034.7	0.106	+			42200	TAAETHYTY	9	77	528.7347625426657	1055.4549721521314	2	528.7356567382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TAAETHYTY_	ENSG00000158773|ENST00000368021|USF1;ENST00000491629.5_1_1:161011414-161013065:-|nuORF;ENST00000529476.1_1_1:161011414-161013065:-|nuORF;nc|ENSG00000158773|P22415-2|USF1;USF1|p.G130Vfs*33|3|0.3|ENSG00000158773|chr1:161041734-161041734|C/-|frameshift_variant	129.68262048586715	0.015338143639892752	4				NaN	NaN	0	NaN	5770	2939	8708
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8712	24.779	NaN	33557	30	0	6962.7	0.106	+			6052	AVMGNPVTR	9	94	472.75229819146097	943.490043449722	2	472.7524719238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVMGNPVTR_	ENSG00000136021|ENST00000360820|SCYL2	82.24051045832904	0.08786059719216216	4				NaN	NaN	0	NaN	5771	2939	8708
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8713	24.78	NaN	11090	30	0	2036.5	0.106	+			1376	AEVKERVTL	9	76	522.805521471351	1043.5964900095018	2	522.8063354492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEVKERVTL_	EIF2B5|p.L605Pfs*9|1|0.26|ENSG00000145191|chr3:184143504-184143505|-/C|frameshift_variant;ENSG00000145191|ENST00000648915|EIF2B5;ENST00000491144.5_1_3:183857994-183862728:+|nuORF;ENST00000492773.5_1_3:183859720-183860594:+|nuORF	66.96192283764107	0.15557981141143568	4				NaN	NaN	0	NaN	5772	2939	8708
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8714	24.782	NaN	31110	30	0	17611	0.106				-1	 	0	60	447.9204954794848	1340.7396570386545	3	447.9208068847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5773	2939	8708
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8715	24.784	NaN	7268.8	30	0	1762.9	0.036	+			37288	SLARQRKW	8	63	348.8729337358803	NaN	0	348.8729553222656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SLARQRKW_	ENSG00000116544|ENST00000373347|DLGAP3	30.503639358989545	1.7418937515398478	4				NaN	NaN	0	NaN	5774	2939	8708
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8732	24.82	NaN	200120	30	0	34317	0.162	+			29138	NVADLHEKY	9	104	544.7713600420719	1087.5281671509438	2	544.7722778320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NVADLHEKY_	ENSG00000100804|ENST00000361611|PSMB5;ENST00000493471.2_1_14:23495300-23497005:-|nuORF;nc|ENSG00000100804|P28074-3|PSMB5	145.46060221211434	0.007927189773590037	4				NaN	NaN	0	NaN	5788	2942	8731
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8733	24.823	NaN	37140	30	0	15462	0.106	+			19848	KEEHEVAVL	9	86	527.2826948737002	NaN	0	527.2827758789062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEEHEVAVL_	ENSG00000142089|ENST00000399808|IFITM3;ENSG00000185885|ENST00000408968|IFITM1;IFITM1|p.S16Afs*9|1|0.39|ENSG00000185885|chr11:314210-314210|C/-|frameshift_variant	42.86426827375447	0.2558691296974908	4				NaN	NaN	0	NaN	5789	2942	8731
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8734	24.825	NaN	28404	30	0	6348	0.106	+			42030	SVYYNEATGGK	11	76	594.7796987440377	1187.5448445548752	2	594.7804565429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVYYNEATGGK_	ENSG00000196230|ENST00000327892|TUBB;TUBB|p.G142Afs*23|1|0.35|ENSG00000196230|chr6:30723483-30723483|G/-|frameshift_variant	133.9117890846969	0.0009919851659026422	4				NaN	NaN	0	NaN	5790	2942	8731
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8735	24.827	NaN	28142	30	0	8932.3	0.106	+			38048	SPQQEKQPRL	10	87	605.8302023098994	1209.6458516865987	2	605.8309326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SPQQEKQPRL_	ENST00000537638.6_1_12:57881132-57881282:+|nuORF	46.45678178249821	0.4896490706773647	4				NaN	NaN	0	NaN	5791	2942	8731
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8736	24.829	NaN	13404	30	0	1131.5	0.106	+			36258	SENKAQVSL	9	84	488.2574177577644	974.5002825823289	2	488.2586364746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SENKAQVSL_	ENSG00000152818|ENST00000367545|UTRN;nc|ENSG00000152818|P46939-2|UTRN;UTRN|p.G3160*|1|0.03|ENSG00000152818|chr6:144821001-144821002|AG/-|frameshift_variant;UTRN|p.K1847Ffs*66|1|0.07|ENSG00000152818|chr6:144516945-144516946|-/TTTAA|frameshift_variant;UTRN|p.K951Rfs*32|2|0.22|ENSG00000152818|chr6:144461335-144461335|A/-|frameshift_variant;UTRN|p.L985Wfs*4|1|0.07|ENSG00000152818|chr6:144462753-144462754|-/GGGC|frameshift_variant;UTRN|p.R3003Pfs*5|1|0.27|ENSG00000152818|chr6:144793915-144793916|-/C|frameshift_variant;UTRN|p.T2422Hfs*35|1|0.47|ENSG00000152818|chr6:144557282-144557282|A/-|frameshift_variant	76.16968421966216	0.11411088698345859	4				NaN	NaN	0	NaN	5792	2942	8731
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8737	24.831	NaN	22879	30	0	11079	0.106	+			15706	GVNRFCLSK	9	70	360.85806420496885	1079.5523632151067	3	360.8587951660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_GVNRFC(Carbamidomethyl (C))LSK_	ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;nc|ENSG00000185164|Q5JPE7-3|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2;NOMO1|p.P1102Hfs*42|1|0.36|ENSG00000103512|chr16:14886838-14886838|C/-|frameshift_variant	80.45461616416974	0.09558281504443908	4				NaN	NaN	0	NaN	5793	2942	8731
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8738	24.832	NaN	38615	30	0	7918.4	0.033				-1	 	0	89	438.2160672721	874.4175816110001	2	438.21630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5794	2942	8731
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8754	24.867	NaN	100130	30	0	18278	0.115	+			42550	TASAVVQHM	9	86	472.2363253894488	942.4580978456976	2	472.2366027832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TASAVVQHM_	ENSG00000115524|ENST00000335508|SF3B1	131.03138772384656	0.014687601201650916	4				NaN	NaN	0	NaN	5807	2945	8753
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8755	24.868	NaN	115430	30	0	35164	0.085	+			19637	KDKEYEEIL	9	84	389.53605924149724	1165.5863483246917	3	389.53607177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KDKEYEEIL_	tr|U7T128|U7T128_FUSNUPrepilin-typeN-terminalcleavage/methylationdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00781PE=4SV=1	106.68306549817024	0.032382560583716295	4				NaN	NaN	0	NaN	5808	2945	8753
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8756	24.87	NaN	80364	30	0	17020	0.096			+	28969	NSGGIVYLKN	10	103	532.7898121284952	1063.5650713237903	2	532.7905883789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NSGGIVYLKN_	REV__ENSG00000099910|ENST00000328879|KLHL22;REV__nc|ENSG00000099910|Q53GT1-3|KLHL22	104.0567914643314	0.06564926686336217	4				NaN	NaN	0	NaN	5809	2945	8753
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8757	24.872	NaN	37435	30	0	4890	0.106			+	50167	WLCLAQVR	8	84	494.77404067993416	987.5335284266683	2	494.7743225097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_WLCLAQVR_	REV__ENSG00000085511|ENST00000392142|MAP3K4;REV__nc|ENSG00000085511|Q9Y6R4-2|MAP3K4	68.484700416344	0.4195245774506064	4				NaN	NaN	0	NaN	5810	2945	8753
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8758	24.874	NaN	44764	30	0	23759	0.106				-1	 	0	79	435.2449953073438	868.4754376814876	2	435.2453918457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5811	2945	8753
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8759	24.875	NaN	29719	30	0	5707.6	0.106			+	15552	GVFGLLGTRI	10	94	344.87860071547414	1031.6139727466225	3	344.8792419433594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GVFGLLGTRI_	REV__DIP2C|p.H1200Lfs*7|1|0.08|ENSG00000151240|chr10:329587-329588|-/GCCCA|frameshift_variant;REV__ENSG00000151240|ENST00000280886|DIP2C;REV__nc|ENSG00000151240|Q9Y2E4-2|DIP2C	31.529811441608018	0.6223461015008678	4				NaN	NaN	0	NaN	5812	2945	8753
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8760	24.877	NaN	10967	30	0	2051.7	0.036	+			26161	LSQSLHLQF	9	83	358.19705950427795	1071.569349113034	3	358.197509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSQSLHLQF_	ENST00000529940.5_1_11:8752463-8832809:-|nuORF	51.33545320467046	0.2872990594074956	4				NaN	NaN	0	NaN	5813	2945	8753
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8761	24.878	NaN	7449	30	0	1493.4	0.142	+			31145	QGGKDWSPTL	10	69	363.51674578798026	1087.5284079641408	3	363.5171203613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_QGGKDWSPTL_	ENSG00000115159|ENST00000438166|GPD2;nc|ENSG00000115159|P43304-2|GPD2	29.14955571784316	0.6417842315402807	4				NaN	NaN	0	NaN	5814	2945	8753
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8779	24.918	NaN	82509	30	0	8030.6	0.195	+			23597	LANGQTKVL	9	97	472.2817108331421	942.5488687330842	2	472.28204345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LANGQTKVL_	ENSG00000265972|ENST00000582401|TXNIP;ENST00000488537.1_1_1:145440216-145440639:+|nuORF;nc|ENSG00000265972|Q9H3M7-2|TXNIP	101.25262130126117	0.03792372629710479	4				NaN	NaN	0	NaN	5829	2948	8778
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8780	24.921	NaN	58422	30	0	14536	0.106			+	11744	FSGTGARL	8	88	404.71919013519465	NaN	0	404.7192687988281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FSGTGARL_	REV__ENST00000240055.7_1_12:104529243-104532019:-|nuORF	58.78195531508484	1.7418937515398478	4				NaN	NaN	0	NaN	5830	2948	8778
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8781	24.923	NaN	14284	30	0	1511.5	0.106	+			8548	EAVKQYSSY	9	85	537.7586253277362	1073.5026977222724	2	537.7593383789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EAVKQYSSY_	ENSG00000170525|ENST00000379775|PFKFB3;nc|ENSG00000170525|Q16875-2|PFKFB3;nc|ENSG00000170525|Q16875-3|PFKFB3;nc|ENSG00000170525|Q16875-4|PFKFB3	195.06343300570734	5.420119182691198E-05	4				NaN	NaN	0	NaN	5831	2948	8778
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8782	24.925	NaN	21280	30	0	3094.2	0.106			+	11668	FQQFFASCSL	10	96	412.18927890293537	1233.5460073090062	3	412.19000244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_FQQFFASC(Carbamidomethyl (C))SL_	REV__ENSG00000121671|ENST00000616080|CRY2;REV__nc|ENSG00000121671|Q49AN0-2|CRY2	63.53385203322761	0.33370026130094593	4				NaN	NaN	0	NaN	5832	2948	8778
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8783	24.927	NaN	12521	30	0	2358.3	0.106	+			11854	FTAPSTVGK	9	77	454.2473844403471	906.4802159474942	2	454.2477111816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FTAPSTVGK_	ENSG00000140694|ENST00000437198|PARN;nc|ENSG00000140694|O95453-2|PARN;nc|ENSG00000140694|O95453-3|PARN;nc|ENSG00000140694|O95453-4|PARN	93.1432384553994	0.056003526918089595	4				NaN	NaN	0	NaN	5833	2948	8778
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8784	24.928	NaN	7216.2	30	0	1380.5	0.106			+	38378	SRSRQPSPAI	10	72	549.8039913157843	1097.5934296983685	2	549.8049926757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SRSRQPSPAI_	REV__EIF2AK3|p.D965Gfs*7|1|0.04|ENSG00000172071|chr2:88570965-88570966|-/GTTTTCATTAAAATAC|frameshift_variant;REV__ENSG00000172071|ENST00000303236|EIF2AK3	42.86426827375447	0.522752283233888	4				NaN	NaN	0	NaN	5834	2948	8778
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8785	24.93	NaN	36795	30	0	10062	0.034				-1	 	0	93	482.75795889173236	963.5013648502647	2	482.75860595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5835	2948	8778
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8803	24.967	NaN	13541	30	0	1225.6	0.213	+			34306	RTLSDYNIQK	10	80	619.3297362446534	1236.6449195561067	2	619.3303833007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTLSDYNIQK_	ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000392399.3_1_2:137087013-137087097:-|nuORF;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000597285.1_1_19:7730614-7730836:+|nuORF;UBB|p.D191Tfs*35|2|0.18|ENSG00000170315|chr17:16382471-16382471|C/-|frameshift_variant;UBB|p.D191Tfs*35|2|0.18|ENSG00000170315|chr17:16382471-16382471|C/-|frameshift_variant	120.63048641472336	0.026439265609364573	4				NaN	NaN	0	NaN	5850	2951	8802
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8804	24.971	NaN	10735	30	0	1840.9	0.106	+			16588	HGFGNVHAY	9	78	501.2326089826093	1000.4506650320186	2	501.2328796386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HGFGNVHAY_	ENSG00000144354|ENST00000306721|CDCA7;nc|ENSG00000144354|Q9BWT1-3|CDCA7;nc|ENSG00000144354|Q9BWT1-5|CDCA7;nc|ENSG00000144354|Q9BWT1-6|CDCA7;nc|ENSG00000144354|Q9BWT1|CDCA7	73.97473282117947	0.12360187025703594	4				NaN	NaN	0	NaN	5851	2951	8802
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8805	24.973	NaN	17570	30	0	5258	0.106			+	24825	LISNQYNKI	9	88	546.8060736895434	1091.5975944458867	2	546.3087158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LISNQYNKI_	REV__tr|U7T2L5|U7T2L5_FUSNUCelldivisionproteinFtsZOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00616PE=4SV=1	53.351449002276354	0.2690372970092375	4				NaN	NaN	0	NaN	5852	2951	8802
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8806	24.974	NaN	15768	30	0	2042.4	0.106	+			13869	GQYGNPLNK	9	93	495.7534751987194	989.4923974642388	2	495.7538146972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GQYGNPLNK_	ADAM10|p.P631Lfs*17|1|0.5|ENSG00000137845|chr15:58610430-58610430|G/-|frameshift_variant;ENSG00000137845|ENST00000260408|ADAM10;ENST00000558733.5_1_15:58947546-59041769:-|nuORF;ENST00000560608.5_1_15:58971480-59041769:-|nuORF;ENST00000561149.1_1_15:58974496-59041769:-|nuORF	104.74654710444128	0.034358562718640136	4				NaN	NaN	0	NaN	5853	2951	8802
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8807	24.976	NaN	54175	30	0	15621	0.106			+	8557	EAVTDEPAK	9	100	480.2384588895892	958.4623648459784	2	480.2376708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EAVTDEPAK_	REV__ENSG00000166963|ENST00000300231|MAP1A;REV__MAP1A|p.G2418Afs*36|1|0.26|ENSG00000166963|chr15:43528722-43528722|G/-|frameshift_variant;REV__MAP1A|p.K1546Rfs*6|1|0.28|ENSG00000166963|chr15:43526107-43526107|A/-|frameshift_variant;REV__MAP1A|p.L1905Pfs*9|1|0.27|ENSG00000166963|chr15:43527180-43527181|-/C|frameshift_variant;REV__MAP1A|p.R2065Vfs*5|1|0.25|ENSG00000166963|chr15:43527660-43527660|C/-|frameshift_variant;REV__MAP1A|p.S2460Ifs*4|1|0.32|ENSG00000166963|chr15:43528844-43528845|-/C|frameshift_variant;REV__nc|ENSG00000166963|P78559-2|MAP1A	63.53385203322761	0.18415635464017938	4				NaN	NaN	0	NaN	5854	2951	8802
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8808	24.978	NaN	4717.1	30	0	400.17	0.038	+			33777	RQAELAQWQK	10	81	629.3379331345953	1256.6613133359906	2	629.3389282226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RQAELAQWQK_	ENSG00000183978|ENST00000328434|COA3	91.46909648831856	0.1226630089017797	4				NaN	NaN	0	NaN	5855	2951	8802
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8809	24.979	NaN	11537	30	0	1593.7	0.142	+			44430	TSLSVSTPK	9	80	460.2578877504403	918.5012225676807	2	460.2583312988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TSLSVSTPK_	ENSG00000136021|ENST00000360820|SCYL2;ENST00000392253.2_1_2:202275598-202275970:-|nuORF	72.87924865735499	0.12833875048249987	4				NaN	NaN	0	NaN	5856	2951	8802
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8827	25.018	NaN	113340	30	0	33804	0.162	+			39938	STMGYMAAK	9	86	480.2193312251121	958.4241095170242	2	480.219970703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STMGYMAAK_	ENSG00000080824|ENST00000216281|HSP90AA1;ENST00000436135.1_1_1:158495283-158495625:+|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1	153.03582135801034	0.006161527642367307	4				NaN	NaN	0	NaN	5871	2954	8826
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8828	25.021	NaN	26378	30	0	5078.6	0.106			+	39770	STKDKGNTAGA	11	86	525.2657320032956	1048.5169110733912	2	525.2666625976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STKDKGNTAGA_	REV__ENSG00000183036|ENST00000328619|PCP4	76.16968421966216	0.18430501143391895	4				NaN	NaN	0	NaN	5872	2954	8826
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8829	25.023	NaN	10370	30	0	1194.6	0.106				-1	TVICSTINK	9	76	518.2781551004886	1034.541757267777	2	518.2789916992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_TVIC(Carbamidomethyl (C))STINK_	ACTR3B-JMJD1C|1|fusion;ENSG00000171988|ENST00000399262|JMJD1C;JMJD1C|p.A2114Cfs*5|1|0.04|ENSG00000171988|chr10:63189399-63189400|-/T|frameshift_variant;JMJD1C|p.I2113Kfs*18|1|0.04|ENSG00000171988|chr10:63189400-63189401|-/TT|frameshift_variant;nc|ENSG00000171988|Q15652-2|JMJD1C;nc|ENSG00000171988|Q15652-3|JMJD1C	65.46538089061403	0.16805504838372562	4				NaN	NaN	0	NaN	5873	2954	8826
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8830	25.025	NaN	8864.1	30	0	1069.9	0.106			+	48007	VSQSQQVL	8	77	444.7434126590477	887.4722723848954	2	444.7426452636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSQSQQVL_	REV__ENSG00000197603|ENST00000651892|CPLANE1;REV__nc|ENSG00000197603|Q9H799-5|CPLANE1;REV__nc|ENSG00000197603|Q9H799|CPLANE1	62.107414245175825	0.4809183816468817	4				NaN	NaN	0	NaN	5874	2954	8826
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8831	25.027	NaN	7716.4	30	0	1545	0.106	+			14570	GTFQTTMTK	9	83	507.7496585094492	NaN	0	507.7496337890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTFQTTMTK_	ENSG00000085719|ENST00000517490|CPNE3;ENST00000517862.1_1_8:87552529-87557099:+|nuORF	77.53327743719008	0.07983619970221587	4				NaN	NaN	0	NaN	5875	2954	8826
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8832	25.028	NaN	31393	30	0	9345.7	0.106	+			39420	STDRLTVLK	9	80	344.8727273818839	1031.5963527458518	3	344.8731689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STDRLTVLK_	ENSG00000138670|ENST00000264400|RASGEF1B;nc|ENSG00000138670|Q0VAM2-2|RASGEF1B;nc|ENSG00000138670|Q0VAM2-3|RASGEF1B;RASGEF1B|p.T323Lfs*5|1|0.3|ENSG00000138670|chr4:81442338-81442338|T/-|frameshift_variant	68.84614121027924	0.14577793175421136	4				NaN	NaN	0	NaN	5876	2954	8826
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8833	25.03	NaN	16452	30	0	3843.1	0.037				-1	 	0	71	376.54512286934334	1126.6135392082301	3	376.54522705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5877	2954	8826
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8851	25.066	NaN	47384	30	0	16675	0.214	+			46480	VETGVLKPG	9	92	450.26275429616567	898.5109556591314	2	450.2633056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VETGVLKPG_	ENSG00000156508|ENST00000309268|EEF1A1;ENST00000436459.2_1_9:135895553-135896258:+|nuORF;ENST00000450915.1_1_7:88268512-88269193:+|nuORF;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	131.03138772384656	0.014687601201650916	4				NaN	NaN	0	NaN	5892	2957	8850
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8852	25.07	NaN	28763	30	0	8440.8	0.106			+	5020	ATSDLLMGGK	10	78	504.75468824724015	1007.4948235612803	2	504.7551574707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_ATSDLLM(Oxidation (M))GGK_	REV__ENSG00000078269|ENST00000355585|SYNJ2;REV__nc|ENSG00000078269|O15056-2|SYNJ2;REV__nc|ENSG00000078269|O15056-3|SYNJ2;REV__SYNJ2|p.L1226Tfs*32|1|0.22|ENSG00000078269|chr6:158093029-158093030|-/C|frameshift_variant;REV__SYNJ2|p.P1225Hfs*19|1|0.23|ENSG00000078269|chr6:158093030-158093030|C/-|frameshift_variant	87.69643885390035	0.14426223466775756	4				NaN	NaN	0	NaN	5893	2957	8850
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8853	25.072	NaN	14595	30	0	2323.6	0.106				-1	 	0	88	458.72931957388187	915.4440862145638	2	458.7296447753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5894	2957	8850
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8854	25.074	NaN	11707	30	0	2564.1	0.106	+			16944	HPNNVVSVKY	10	81	578.808553689292	1155.602554445384	2	578.8095092773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HPNNVVSVKY_	ENSG00000139116|ENST00000361418|KIF21A;ENST00000547733.1_1_12:39688228-39705384:-|nuORF;KIF21A|p.P1541Lfs*6|1|0.27|ENSG00000139116|chr12:39303074-39303074|G/-|frameshift_variant;nc|ENSG00000139116|Q7Z4S6-2|KIF21A;nc|ENSG00000139116|Q7Z4S6-3|KIF21A;nc|ENSG00000139116|Q7Z4S6-4|KIF21A;nc|ENSG00000139116|Q7Z4S6-5|KIF21A;nc|ENSG00000139116|Q7Z4S6-6|KIF21A	125.71293069911285	0.01926106323661889	4				NaN	NaN	0	NaN	5895	2957	8850
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8855	25.075	NaN	10508	30	0	1374.5	0.106	+			14056	GSIGGTFAK	9	71	419.22655990427427	836.4385668753486	2	419.2267761230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GSIGGTFAK_	ENSG00000137992|ENST00000370132|DBT	85.16082228582465	0.07850854922700509	4				NaN	NaN	0	NaN	5896	2957	8850
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8856	25.077	NaN	17456	30	0	1307.8	0.106	+			8763	EEGPLFHN	8	86	471.71884351211696	941.423134091034	2	471.71923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EEGPLFHN_	CPAMD8|p.G174Afs*21|1|0.29|ENSG00000160111|chr19:17011645-17011645|C/-|frameshift_variant;CPAMD8|p.H1052Afs*30|1|0.33|ENSG00000160111|chr19:16929073-16929074|-/C|frameshift_variant;CPAMD8|p.H1052Ifs*127|3|0.34|ENSG00000160111|chr19:16929074-16929074|C/-|frameshift_variant;CPAMD8|p.H593Lfs*4|1|0.13|ENSG00000160111|chr19:16977489-16977489|T/-|frameshift_variant;CPAMD8|p.M1571Cfs*32|1|0.32|ENSG00000160111|chr19:16902765-16902765|G/-|frameshift_variant;ENSG00000160111|ENST00000443236|CPAMD8;nc|ENSG00000160111|Q8IZJ3-2|CPAMD8	31.954861631926434	0.7126016770032289	4				NaN	NaN	0	NaN	5897	2957	8850
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8857	25.079	NaN	20210	30	0	4852.1	0.037			+	45984	VATGAVRELLP	11	72	375.89196480761177	1124.6540650230354	3	375.892333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VATGAVRELLP_	REV__ENSG00000059588|ENST00000040877|TARBP1;REV__TARBP1|p.S411Hfs*12|1|0.06|ENSG00000059588|chr1:234467519-234467519|A/-|frameshift_variant	34.08650109265054	0.6322515996262609	4				NaN	NaN	0	NaN	5898	2957	8850
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8875	25.116	NaN	693870	30	0	312510	0.142				-1	 	0	72	322.1931087932889	642.3716646533778	2	322.1935729980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5913	2960	8874
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8876	25.119	NaN	51907	30	0	4794.7	0.106				-1	 	0	95	515.8102481274518	1029.6059433217035	2	515.8109741210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5914	2960	8874
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8877	25.121	NaN	47460	30	0	17903	0.106	+			9652	ELSKAKEII	9	97	344.2092948246353	NaN	0	344.2095642089844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ELSKAKEII_	DST|p.K5076Nfs*24|1|0.31|ENSG00000151914|chr6:56472218-56472218|T/-|frameshift_variant;DST|p.T4428Nfs*23|1|0.12|ENSG00000151914|chr6:56497896-56497897|-/T|frameshift_variant;ENSG00000151914|ENST00000680361|DST;nc|ENSG00000151914|Q03001-9|DST;nc|ENSG00000151914|Q03001|DST	95.81516180277367	0.029873745472008544	4				NaN	NaN	0	NaN	5915	2960	8874
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8878	25.123	NaN	11157	30	0	1011.2	0.106	+			37889	SNYNLPMHK	9	82	552.268407159909	1102.5222613866179	2	552.2689819335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SNYNLPMHK_	ENSG00000174444|ENST00000307961|RPL4;ENST00000422486.1_1_3:185135660-185136437:-|nuORF;ENST00000567229.5_1_15:66791747-66793486:-|nuORF	117.5257442709337	0.022697614825424036	4				NaN	NaN	0	NaN	5916	2960	8874
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8879	25.124	NaN	8866.1	30	0	1108.2	0.106			+	6956	CPLRGAGTVA	10	85	472.75229819146097	943.490043449722	2	473.253173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_CPLRGAGTVA_	REV__ENSG00000138496|ENST00000682323|PARP9;REV__nc|ENSG00000138496|Q8IXQ6-3|PARP9;REV__nc|ENSG00000138496|Q8IXQ6|PARP9;REV__PARP9|p.T633Pfs*5|2|0.22|ENSG00000138496|chr3:122537047-122537047|T/-|frameshift_variant	44.116797842482775	0.5112108506279902	4				NaN	NaN	0	NaN	5917	2960	8874
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8880	25.126	NaN	6172.5	30	0	982.86	0.106	+			40175	STQSLSLQR	9	73	510.27871621379484	1018.5428794943897	2	510.2781982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STQSLSLQR_	ENSG00000187479|ENST00000617612|C11orf96;nc|nan|Q7Z7L8|C11orf96	58.22992032128504	0.22837015374068087	4				NaN	NaN	0	NaN	5918	2960	8874
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8881	25.128	NaN	19999	30	0	4955.5	0.035	+			42342	TAHDLLPIK	9	78	336.53385173438676	1006.5797258033604	3	336.53662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TAHDLLPIK_	ENST00000454544.2_1_1:147907560-147907839:+|nuORF	30.503639358989545	0.5181749237905803	4				NaN	NaN	0	NaN	5919	2960	8874
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8899	25.165	NaN	40396	30	0	9158.8	0.209			+	2342	AMSNIRDI	8	93	460.2362634105791	918.4579738879582	2	460.2366638183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AMSNIRDI_	REV__DAAM2|p.P525Lfs*11|1|0.48|ENSG00000146122|chr6:39879202-39879202|C/-|frameshift_variant;REV__ENSG00000146122|ENST00000274867|DAAM2;REV__nc|ENSG00000146122|Q86T65-4|DAAM2	76.7741389293348	0.3504530765139327	4				NaN	NaN	0	NaN	5934	2963	8898
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8900	25.168	NaN	29947	30	0	2523	0.106				-1	 	0	86	517.2608926746738	1032.5072324161474	2	517.2616577148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5935	2963	8898
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8901	25.17	NaN	51644	30	0	8506.4	0.106	+			33963	RSDTPLIYK	9	104	546.8060736895434	1091.5975944458867	2	546.8063354492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RSDTPLIYK_	ENSG00000196305|ENST00000443024|IARS1	81.52500206392136	0.09095445986635249	4				NaN	NaN	0	NaN	5936	2963	8898
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8902	25.172	NaN	20532	30	0	2692.8	0.106	+			8870	EERPPAQAL	9	72	505.7660075342476	1009.5174621352952	2	505.76654052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EERPPAQAL_	ENSG00000047849|ENST00000683076|MAP4;MAP4|p.R919Gfs*14|1|0.44|ENSG00000047849|chr3:47870917-47870917|G/-|frameshift_variant;MAP4|p.T960Qfs*35|1|0.3|ENSG00000047849|chr3:47869309-47869309|T/-|frameshift_variant;MAP4|p.V999*|1|0.25|ENSG00000047849|chr3:47867318-47867318|T/-|frameshift_variant;nc|ENSG00000047849|P27816-2|MAP4;nc|ENSG00000047849|P27816-5|MAP4;nc|ENSG00000047849|P27816-6|MAP4;nc|ENSG00000047849|P27816|MAP4	143.10689835833298	0.00902249513149409	4				NaN	NaN	0	NaN	5937	2963	8898
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8903	25.174	NaN	8371.2	30	0	1262.8	0.106	+			534	ADAPWSWGTH	10	80	564.2484035412816	NaN	0	564.2484130859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ADAPWSWGTH_	ARHGEF1|p.L344Wfs*12|2|0.31|ENSG00000076928|chr19:41896386-41896386|C/-|frameshift_variant	49.44154591367651	0.30913310806145605	4				NaN	NaN	0	NaN	5938	2963	8898
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8904	25.176	NaN	7512.4	30	0	771.04	0.036	+			50384	YAACQSHAF	9	83	527.7233495170321	1053.4321461008642	2	527.7245483398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_YAAC(Carbamidomethyl (C))QSHAF_	ENSG00000244187|ENST00000290079|TMEM141;ENST00000465017.5_1_9:139685862-139687281:+|nuORF;ENST00000489739.1_1_9:139685858-139686514:+|nuORF	115.49404669440601	0.023927554121326553	4				NaN	NaN	0	NaN	5939	2963	8898
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8905	25.176	NaN	52052	30	0	18701	0.145				-1	 	0	102	398.89914528337687	1193.6756064503306	3	398.89947509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5940	2963	8898
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8923	25.216	NaN	46879	30	0	12089	0.214				-1	 	0	96	434.7795535706364	867.5445542080728	2	434.77984619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5955	2966	8922
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8924	25.219	NaN	9377.9	30	0	1053.4	0.106	+			44687	TTIEEDKSVLK	11	85	631.8438988169936	1261.673244700787	2	631.845458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTIEEDKSVLK_	ENSG00000183576|ENST00000331768|SETD3	125.68205650279488	0.009258456973060042	4				NaN	NaN	0	NaN	5956	2966	8922
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8925	25.221	NaN	30238	30	0	3309.8	0.106			+	39245	STAKWAPQ	8	96	444.7317169627037	887.4488809922074	2	444.7319641113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STAKWAPQ_	REV__ENSG00000135976|ENST00000420699|ANKRD36;REV__ENSG00000196912|ENST00000359901|ANKRD36B;REV__ENST00000421946.2_1_2:97879127-97913404:+|nuORF;REV__nc|ENSG00000135976|A6QL64-3|ANKRD36;REV__nc|ENSG00000196912|Q8N2N9-2|ANKRD36B;REV__nc|ENSG00000196912|Q8N2N9-3|ANKRD36B	51.33545320467046	0.5859736979383976	4				NaN	NaN	0	NaN	5957	2966	8922
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8926	25.223	NaN	13316	30	0	2658.8	0.106	+			33124	RENTQTTIKL	10	83	602.3378600391189	1202.6611671450378	2	602.3383178710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RENTQTTIKL_	ENSG00000165119|ENST00000376263|HNRNPK;ENST00000485383.1_1_3:96068520-96068997:+|nuORF;nc|ENSG00000165119|P61978-3|HNRNPK;nc|ENSG00000165119|P61978|HNRNPK	114.85826248499774	0.03459167991829056	4				NaN	NaN	0	NaN	5958	2966	8922
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8927	25.225	NaN	9598.7	30	0	2175.3	0.106				-1	 	0	79	467.2843464572673	932.5541399813346	2	467.2846984863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5959	2966	8922
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8928	25.227	NaN	10861	30	0	1083.2	0.036	+			30867	QEILQVEQQ	9	82	557.7888063419662	1113.5630597507322	2	557.790771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QEILQVEQQ_	ECEL1|p.P567Hfs*48|2|0.32|ENSG00000171551|chr2:232482594-232482594|G/-|frameshift_variant;ENSG00000171551|ENST00000304546|ECEL1;nc|ENSG00000171551|O95672-2|ECEL1	117.81106730687013	0.02252488733980868	4				NaN	NaN	0	NaN	5960	2966	8922
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8929	25.227	NaN	10463	30	0	3119.5	0.144			+	4385	ATHIVVHAGAV	11	63	358.87375529254257	1073.5994364778278	3	358.8742980957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATHIVVHAGAV_	REV__ENSG00000099377|ENST00000297679|HSD3B7;REV__HSD3B7|p.L182Cfs*4|1|0.23|ENSG00000099377|chr16:30986846-30986846|G/-|frameshift_variant;REV__nc|ENSG00000099377|Q9H2F3-2|HSD3B7	26.063383197487333	0.7164075632144343	4				NaN	NaN	0	NaN	5961	2966	8922
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8947	25.267	NaN	43799	30	0	9911.2	0.214				-1	 	0	80	501.2842916696072	1000.5540304060145	2	501.2847900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5976	2969	8946
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8948	25.27	NaN	14651	30	0	2238.6	0.106				-1	 	0	79	560.329024994825	1118.6434970564499	2	560.330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5977	2969	8946
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8949	25.272	NaN	24638	30	0	5040.4	0.106				-1	 	0	77	422.2555060083901	842.4964590835802	2	422.255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5978	2969	8946
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8950	25.274	NaN	11935	30	0	1320.1	0.106	+			24099	LEKKLEIS	8	90	480.2916966854065	958.5688404376131	2	480.29193115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LEKKLEIS_	tr|U7SLD7|U7SLD7_FUSNUHelicaseSNFOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01975PE=4SV=1	68.78682469695295	0.41700713582915416	4				NaN	NaN	0	NaN	5979	2969	8946
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8951	25.276	NaN	16556	30	0	3589.8	0.106	+			42829	TECSVRNGS	9	79	476.7110012290621	951.4074495249242	2	476.7113952636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TECSVRNGS_	ENSG00000197081|ENST00000356956|IGF2R;IGF2R|p.D2163Tfs*2|1|0.16|ENSG00000197081|chr6:160089932-160089932|G/-|frameshift_variant;IGF2R|p.G2426Efs*10|1|0.25|ENSG00000197081|chr6:160104882-160104882|G/-|frameshift_variant	47.657333605630114	0.33044192980041115	4				NaN	NaN	0	NaN	5980	2969	8946
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8952	25.278	NaN	18592	30	0	3214.4	0.036	+			23386	LAADMDLHC	9	80	531.222187551138	1060.4298221690758	2	531.2235107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),Oxidation (M)	_LAADM(Oxidation (M))DLHC(Carbamidomethyl (C))_	AMER2|p.S94Afs*8|1|0.33|ENSG00000165566|chr13:25171344-25171344|C/-|frameshift_variant;ENSG00000165566|ENST00000515384|AMER2;nc|ENSG00000165566|Q8N7J2-2|AMER2	65.80317337860623	0.1652391959156183	4				NaN	NaN	0	NaN	5981	2969	8946
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8953	25.278	NaN	89639	30	0	30167	0.14	+			23245	KYIHSANVL	9	94	522.7948121837505	1043.575071434301	2	522.7954711914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KYIHSANVL_	ENSG00000069956|ENST00000261845|MAPK6;ENSG00000100030|ENST00000215832|MAPK1;ENSG00000102882|ENST00000263025|MAPK3;ENSG00000141639|ENST00000400384|MAPK4;ENST00000478356.5_2_16:30128576-30134273:-|nuORF;ENST00000483869.1_1_16:30129346-30134419:-|nuORF;MAPK6|p.P206*|1|0.03|ENSG00000069956|chr15:52050053-52050054|CC/-|frameshift_variant;nc|ENSG00000100030|P28482-2|MAPK1;nc|ENSG00000102882|P27361-2|MAPK3;nc|ENSG00000102882|P27361-3|MAPK3	114.8945686534367	0.024290463251177924	4				NaN	NaN	0	NaN	5982	2969	8946
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8971	25.318	NaN	32705	30	0	3841.9	0.214	+			13870	GQYGNPLNK	9	83	495.7534751987194	989.4923974642388	2	495.7536926269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GQYGNPLNK_	ADAM10|p.P631Lfs*17|1|0.5|ENSG00000137845|chr15:58610430-58610430|G/-|frameshift_variant;ENSG00000137845|ENST00000260408|ADAM10;ENST00000558733.5_1_15:58947546-59041769:-|nuORF;ENST00000560608.5_1_15:58971480-59041769:-|nuORF;ENST00000561149.1_1_15:58974496-59041769:-|nuORF	104.74654710444128	0.034358562718640136	4				NaN	NaN	0	NaN	5997	2972	8970
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8972	25.321	NaN	7685.8	30	0	609.42	0.106	+			6168	AVQKAIPMYK	10	69	574.8277856032862	1147.6410182733723	2	574.828857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVQKAIPMYK_	ENSG00000131100|ENST00000253413|ATP6V1E1;ENST00000439215.1_1_1:43369124-43369580:+|nuORF;ENST00000481365.5_1_22:18080958-18102283:-|nuORF;nc|ENSG00000131100|P36543-2|ATP6V1E1;nc|ENSG00000131100|P36543-3|ATP6V1E1	98.62937762414208	0.0817671936103422	4				NaN	NaN	0	NaN	5998	2972	8970
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8973	25.323	NaN	13443	30	0	5399.1	0.106			+	26323	LSVVRGPRQP	10	78	370.2228529739098	1107.6467295219295	3	370.2239990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSVVRGPRQP_	REV__ENSG00000174791|ENST00000311320|RIN1;REV__nc|ENSG00000174791|Q13671-2|RIN1	32.75053402867276	0.6123771875927935	4				NaN	NaN	0	NaN	5999	2972	8970
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8974	25.325	NaN	14048	30	0	2658.8	0.106	+			26389	LTEAPLNPK	9	76	491.7815469505274	981.5485409678548	2	491.7816162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LTEAPLNPK_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000403258.1_1_6:88986231-88986483:-|nuORF;ENST00000446382.2_1_9:6834760-6835018:+|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000502306.1_1_5:15450853-15451165:+|nuORF;ENST00000567299.1_1_19:9629420-9629708:+|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;nc|ENSG00000204434|Q9BYX7|POTEKP	110.11987700582712	0.028875675806141952	4				NaN	NaN	0	NaN	6000	2972	8970
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8975	25.327	NaN	6048.3	30	0	814.96	0.106				-1	LAEGPGPTCC	10	62	354.4837364440349	1060.4293799323048	3	354.48431396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C)	_LAEGPGPTC(Carbamidomethyl (C))C(Carbamidomethyl (C))_	ENSG00000174332|ENST00000628545|GLIS1;GLIS1|p.H410Ifs*53|1|0.33|ENSG00000174332|chr1:53514755-53514755|G/-|frameshift_variant	29.170058357718403	0.6416167986984785	4				NaN	NaN	0	NaN	6001	2972	8970
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8976	25.329	NaN	10406	30	0	1078.6	0.036			+	19839	KEEEKAKLE	9	87	552.3029155010106	NaN	0	552.301025390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KEEEKAKLE_	REV__ENSG00000166960|ENST00000383096|CCDC178;REV__nc|ENSG00000166960|Q5BJE1-2|CCDC178;REV__nc|ENSG00000166960|Q5BJE1-3|CCDC178;REV__nc|ENSG00000166960|Q5BJE1-4|CCDC178	67.49366992349736	0.1173583512313808	4				NaN	NaN	0	NaN	6002	2972	8970
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8977	25.329	NaN	7517.9	30	0	919.06	0.145			+	29516	PDRELLHRI	9	69	383.55467291705725	1147.6421893513718	3	383.5544738769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PDRELLHRI_	REV__ENSG00000130822|ENST00000340888|PNCK;REV__ENST00000466074.5_1_X:152935914-152937529:-|nuORF;REV__ENST00000472324.5_1_X:152935914-152936728:-|nuORF;REV__nc|ENSG00000130822|Q6P2M8-2|PNCK;REV__nc|ENSG00000130822|Q6P2M8-3|PNCK;REV__nc|ENSG00000130822|Q6P2M8-5|PNCK;REV__nc|ENSG00000130822|Q6P2M8-6|PNCK	41.42661286455405	0.403525789677298	4				NaN	NaN	0	NaN	6003	2972	8970
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8995	25.369	NaN	100180	30	0	16516	0.214	+			39547	STFSTNYR	8	110	488.22955810833315	974.4445632834663	2	488.2301025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STFSTNYR_	ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53342924-53344195:+|nuORF	69.6276240434122	0.4100012001731381	4				NaN	NaN	0	NaN	6018	2975	8994
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8996	25.372	NaN	62023	30	0	21945	0.106			+	-1	GTVPHKCTVK	10	87	376.2049464773246	1125.5930100321739	3	376.2053527832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GTVPHKC(Carbamidomethyl (C))TVK_	REV__ENSG00000052126|ENST00000429027|PLEKHA5;REV__ENST00000539256.5_1_12:19282733-19418734:+|nuORF;REV__nc|ENSG00000052126|Q9HAU0-2|PLEKHA5;REV__nc|ENSG00000052126|Q9HAU0-3|PLEKHA5;REV__nc|ENSG00000052126|Q9HAU0-4|PLEKHA5;REV__nc|ENSG00000052126|Q9HAU0-5|PLEKHA5;REV__nc|ENSG00000052126|Q9HAU0|PLEKHA5;REV__PLEKHA5|p.K320Rfs*3|1|0.28|ENSG00000052126|chr12:19274641-19274641|A/-|frameshift_variant;REV__PLEKHA5|p.N310Kfs*8|2|0.26|ENSG00000052126|chr12:19274610-19274611|-/A|frameshift_variant;REV__PLEKHA5|p.N310Tfs*4|1|0.15|ENSG00000052126|chr12:19274611-19274611|A/-|frameshift_variant;REV__PLEKHA5|p.V152Ffs*33|1|0.35|ENSG00000052126|chr12:19257447-19257447|A/-|frameshift_variant	53.08895987439943	0.42869529153390606	4				NaN	NaN	0	NaN	6019	2975	8994
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8997	25.374	NaN	33856	30	0	12194	0.106				-1	 	0	71	342.19852003903554	1023.5737307173067	3	342.1990966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6020	2975	8994
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8998	25.376	NaN	46782	30	0	8441.4	0.106	+			15318	GTVIHFNNPK	10	107	563.8033016901124	1125.5920504470248	2	563.8048706054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTVIHFNNPK_	ENSG00000134717|ENST00000313334|BTF3L4;ENSG00000145741|ENST00000380591|BTF3;nc|ENSG00000134717|Q96K17-2|BTF3L4;nc|ENSG00000145741|P20290-2|BTF3	172.24860141594272	0.0029705495262254346	4				NaN	NaN	0	NaN	6021	2975	8994
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8999	25.378	NaN	137280	30	0	18553	0.106	+			15463	GTYVSSVPR	9	94	483.25577728462065	964.4970016360413	2	483.2561950683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTYVSSVPR_	ENSG00000204252|ENST00000229829|HLA-DOA;ENST00000485901.1_1_6:32974617-32975137:-|nuORF	132.757866228626	0.013877640931359021	4				NaN	NaN	0	NaN	6022	2975	8994
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9000	25.38	NaN	10836	30	0	4193.5	0.036			+	-1	LTMALAIALP	10	73	343.8731695388175	NaN	0	343.8731689453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_LTM(Oxidation (M))ALAIALP_	REV__tr|U7T5S3|U7T5S3_FUSNUPTSsystem,fructose-specificIICcomponentOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00064PE=4SV=1	23.52269567125451	0.42010282974921537	4				NaN	NaN	0	NaN	6023	2975	8994
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9001	25.38	NaN	17775	30	0	3471.9	0.138	+			10790	FAHGNAEL	8	71	429.70867739493593	NaN	0	429.70880126953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FAHGNAEL_	ENSG00000122299|ENST00000355758|ZC3H7A;nc|ENSG00000122299|Q8IWR0-2|ZC3H7A	99.37495909608758	1.7418937515398478	4				NaN	NaN	0	NaN	6024	2975	8994
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9019	25.42	NaN	170490	30	0	90254	0.163				-1	 	0	78	487.26854095328247	972.522528973365	2	487.268798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6039	2978	9018
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9020	25.422	NaN	13704	30	0	1692.9	0.106	+			36099	SEKHIEVEV	9	89	535.2801365883203	NaN	0	535.2798461914062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEKHIEVEV_	ENSG00000130935|ENST00000253247|NOL11;ENST00000583108.5_1_17:65733207-65733809:+|nuORF	110.11987700582712	0.00958887139988123	4				NaN	NaN	0	NaN	6040	2978	9018
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9021	25.425	NaN	13589	30	0	1535.8	0.106			+	45008	TVETKSATY	9	87	500.2526997589469	998.4908465846938	2	500.2529602050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVETKSATY_	REV__ENSG00000188803|ENST00000441885|SHISA6;REV__nc|ENSG00000188803|Q6ZSJ9-2|SHISA6;REV__nc|ENSG00000188803|Q6ZSJ9|SHISA6	49.44154591367651	0.3095138337212152	4				NaN	NaN	0	NaN	6041	2978	9018
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9022	25.426	NaN	10916	30	0	2256.5	0.106	+			8443	EARKQVEVF	9	76	553.3034836788494	1104.5924144244987	2	553.3037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EARKQVEVF_	ENSG00000100911|ENST00000216802|PSME2;ENST00000471700.6_1_14:24612807-24615772:-|nuORF;ENST00000558931.5_1_14:24615401-24615790:-|nuORF;ENST00000559493.5_1_14:24614434-24615772:-|nuORF;ENST00000560592.5_1_14:24614852-24615790:-|nuORF	101.45984612302182	0.0377122763612125	4				NaN	NaN	0	NaN	6042	2978	9018
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9023	25.428	NaN	8858	30	0	890.84	0.106	+			17299	IADPSSKTL	9	62	466.25778002109803	930.5010071089961	2	466.2580261230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IADPSSKTL_	COL12A1|p.G2777Wfs*37|1|0.15|ENSG00000111799|chr6:75102684-75102685|-/G|frameshift_variant;COL12A1|p.G3027Wfs*19|1|0.1|ENSG00000111799|chr6:75087680-75087681|-/G|frameshift_variant;ENSG00000111799|ENST00000322507|COL12A1;nc|ENSG00000111799|Q99715-2|COL12A1;nc|ENSG00000111799|Q99715-4|COL12A1	72.87924865735499	0.12833875048249987	4				NaN	NaN	0	NaN	6043	2978	9018
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9024	25.43	NaN	17455	30	0	1568	0.106	+			10460	EVNPNTRVM	9	86	530.2654465392058	1058.5163401452114	2	530.266357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EVNPNTRVM_	ENSG00000123353|ENST00000243045|ORMDL2;ENSG00000128699|ENST00000392349|ORMDL1;ENSG00000172057|ENST00000304046|ORMDL3;nc|ENSG00000172057|Q8N138-4|ORMDL3	122.1759843771914	0.019882474861609503	4				NaN	NaN	0	NaN	6044	2978	9018
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9025	25.432	NaN	13973	30	0	1786.7	0.035	+			27979	MVNFTSQAN	9	81	506.2317111393882	NaN	0	506.2315673828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MVNFTSQAN_	ENSG00000165970|ENST00000525748|SLC6A5;nc|ENSG00000165970|Q9Y345-2|SLC6A5;nc|ENSG00000165970|Q9Y345-3|SLC6A5	51.33545320467046	0.19748963086191895	4				NaN	NaN	0	NaN	6045	2978	9018
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9043	25.469	NaN	39656	30	0	6231.3	0.214	+			39951	STMGYMMAK	9	101	518.2177263276815	1034.4208997221629	2	518.2191772460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_STMGYMM(Oxidation (M))AK_	ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;ENST00000518337.1_1_8:74128289-74128592:-|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P	129.68262048586715	0.015338143639892752	4				NaN	NaN	0	NaN	6060	2981	9042
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9044	25.473	NaN	28321	30	0	9438.6	0.106	+			29838	PLAGHLAL	8	70	396.2420999157545	790.4696468983091	2	396.2423095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PLAGHLAL_	ENSG00000142910|ENST00000271064|TINAGL1;ENST00000466998.1_1_1:32042169-32043067:+|nuORF;ENST00000481165.5_1_1:32042638-32048843:+|nuORF;nc|ENSG00000142910|Q9GZM7-3|TINAGL1	43.626045697637714	0.6338121648150432	4				NaN	NaN	0	NaN	6061	2981	9042
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9045	25.475	NaN	41883	30	0	3303.3	0.106	+			43225	TEVLKTHGL	9	109	499.286917153996	996.559281374792	2	499.2875061035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TEVLKTHGL_	ENSG00000142541|ENST00000391857|RPL13A	166.0711670676379	0.003437550387609957	4				NaN	NaN	0	NaN	6062	2981	9042
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9046	25.477	NaN	12044	30	0	2923.5	0.106				-1	 	0	68	425.26273870327117	848.5109244733424	2	425.26318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6063	2981	9042
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9047	25.479	NaN	52610	30	0	10672	0.106	+			32999	REFGANDNM	9	94	527.2237619166872	1052.4329709001743	2	527.224853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_REFGANDNM_	ENSG00000162896|ENST00000356495|PIGR	96.66504779109242	0.04607440320619715	4				NaN	NaN	0	NaN	6064	2981	9042
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9048	25.48	NaN	17354	30	0	1879.1	0.036	+			32455	QVKQFADIQ	9	93	538.7915228004881	1075.5684926677761	2	538.7927856445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QVKQFADIQ_	tr|U7SZH4|U7SZH4_FUSNUHelicaseATP-bindingdomain-containingprotein(Fragment)OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00871PE=4SV=1;tr|U7T6K5|U7T6K5_FUSNUHelicaseC-terminaldomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00274PE=4SV=1	75.04331003522576	0.118981335847003	4				NaN	NaN	0	NaN	6065	2981	9042
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9049	25.481	NaN	73861	30	0	6189.4	0.139	+			10744	FAEGQGRAL	9	107	474.7483473832059	947.4821418332118	2	474.7514343261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FAEGQGRAL_	ENSG00000103335|ENST00000301015|PIEZO1;PIEZO1|p.A2395Pfs*117|1|0.37|ENSG00000103335|chr16:88716061-88716067|CCCCGCA/-|frameshift_variant;PIEZO1|p.F1977Lfs*33|1|0.38|ENSG00000103335|chr16:88720403-88720403|A/-|frameshift_variant	75.04331003522576	0.118981335847003	4				NaN	NaN	0	NaN	6066	2981	9042
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9064	25.513	NaN	125180	30	0	12961	0.096	+			10745	FAEGQGRAL	9	87	474.7483473832059	947.4821418332118	2	474.7486877441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FAEGQGRAL_	ENSG00000103335|ENST00000301015|PIEZO1;PIEZO1|p.A2395Pfs*117|1|0.37|ENSG00000103335|chr16:88716061-88716067|CCCCGCA/-|frameshift_variant;PIEZO1|p.F1977Lfs*33|1|0.38|ENSG00000103335|chr16:88720403-88720403|A/-|frameshift_variant	80.45461616416974	0.09558281504443908	4				NaN	NaN	0	NaN	6078	2984	9063
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9065	25.515	NaN	167320	30	0	21880	0.106	+			40012	STMSTNGIPR	10	98	532.2629281183812	1062.5113033035623	2	532.2643432617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STMSTNGIPR_	ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF	148.6902309647307	0.008728094565931875	4				NaN	NaN	0	NaN	6079	2984	9063
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9066	25.516	NaN	86028	30	0	13058	0.106	+			14259	GSSYPVCVSK	10	91	542.2598180041158	1082.5050830750315	2	542.2608642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_GSSYPVC(Carbamidomethyl (C))VSK_	ENSG00000089127|ENST00000202917|OAS1;ENST00000549820.1_1_12:113344820-113354315:+|nuORF;nc|ENSG00000089127|P00973-2|OAS1;nc|ENSG00000089127|P00973-3|OAS1;nc|ENSG00000089127|P00973-4|OAS1;OAS1|p.N280Tfs*8|1|0.07|ENSG00000089127|chr12:112916689-112916689|A/-|frameshift_variant	134.7655990226056	0.012149689860786373	4				NaN	NaN	0	NaN	6080	2984	9063
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9067	25.519	NaN	27394	30	0	12498	0.106			+	18747	ITKNLSALYL	10	86	379.2289644872213	1134.6650640618639	3	379.2288818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ITKNLSALYL_	REV__L1PB1_dup10508|chr13:43056899-43059152:-|2.941020511291588|0.4940460713329822|2.57|483.0|28|1|sense	41.42661286455405	0.5359995577334734	4				NaN	NaN	0	NaN	6081	2984	9063
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9068	25.52	NaN	47692	30	0	16291	0.106	+			46149	VDREVPVAA	9	78	478.26362408953213	954.5126952458643	2	478.2637023925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VDREVPVAA_	ENSG00000122711|ENST00000379721|SPINK4	77.31757898189308	0.1091473830098891	4				NaN	NaN	0	NaN	6082	2984	9063
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9069	25.522	NaN	22685	30	0	8499.1	0.106	+			4286	ATGGTFVVK	9	74	440.25010142605464	878.4856499189093	2	440.25018310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATGGTFVVK_	ENSG00000198208|ENST00000557413|RPS6KL1;ENST00000555834.5_1_14:75375979-75389943:-|nuORF;nc|ENSG00000198208|Q9Y6S9-2|RPS6KL1;nc|ENSG00000198208|Q9Y6S9-4|RPS6KL1	180.92599232761785	0.0012030822705978085	4				NaN	NaN	0	NaN	6083	2984	9063
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9070	25.524	NaN	19017	30	0	4408.6	0.106			+	16733	HLLNLKAE	8	82	469.2763134499322	936.5380739666645	2	469.27667236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HLLNLKAE_	REV__ENSG00000169918|ENST00000307050|OTUD7A;REV__nc|ENSG00000169918|Q8TE49|OTUD7A;REV__OTUD7A|p.V467Cfs*62|1|0.44|ENSG00000169918|chr15:31484676-31484676|C/-|frameshift_variant	87.75429964447693	0.2842685068779738	4				NaN	NaN	0	NaN	6084	2984	9063
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9071	25.526	NaN	13275	30	0	2223.4	0.036	+			38829	SSNDWNVEK	9	84	539.7429749146281	1077.4713968960561	2	539.7437744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_SSNDWNVEK_	ENSG00000151348|ENST00000533608|EXT2;EXT2|p.D82Ifs*30|1|0.43|ENSG00000151348|chr11:44107951-44107951|G/-|frameshift_variant;EXT2|p.N517Tfs*3|1|0.49|ENSG00000151348|chr11:44206844-44206844|A/-|frameshift_variant;nc|ENSG00000151348|Q93063-2|EXT2;nc|ENSG00000151348|Q93063-3|EXT2	133.9934435666947	0.013297982075521412	4				NaN	NaN	0	NaN	6085	2984	9063
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9089	25.563	NaN	26815	30	0	15546	0.214	+			24786	LIGITGHGIP	10	78	489.2921079988977	976.5696630645954	2	489.2927551269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LIGITGHGIP_	ENSG00000160539|ENST00000372264|PLPP7	47.91560031466742	0.4762067885998563	4				NaN	NaN	0	NaN	6100	2987	9088
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9090	25.566	NaN	101020	30	0	26103	0.106	+			15212	GTSSMIVPK	9	98	460.24947944854216	918.4844059638843	2	460.25030517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTSSMIVPK_	ENSG00000166167|ENST00000370187|BTRC;nc|ENSG00000166167|Q9Y297-2|BTRC	90.36981228632155	0.0638227155548745	4				NaN	NaN	0	NaN	6101	2987	9088
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9091	25.568	NaN	21362	30	0	8128.3	0.106	+			14949	GTMKAQGVLLK	11	80	573.3384115564036	1144.662270179607	2	573.3399658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTMKAQGVLLK_	nc|ENSG00000166482|P55083-2|MFAP4	157.3448221729694	5.828160088399005E-05	4				NaN	NaN	0	NaN	6102	2987	9088
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9092	25.57	NaN	34326	30	0	7145.3	0.106	+			23850	LDCAHTAASF	10	91	518.2309590798366	1034.447365226473	2	518.2322998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LDCAHTAASF_	ENST00000336812.4_1_4:24586045-24586090:-|nuORF	66.42927471994793	0.3073667423445326	4				NaN	NaN	0	NaN	6103	2987	9088
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9093	25.572	NaN	21396	30	0	5333.6	0.106	+			36956	SILSGGTPK	9	68	430.24665203301015	858.4787511328203	2	430.247802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SILSGGTPK_	ENSG00000158402|ENST00000323760|CDC25C;nc|ENSG00000158402|P30307-2|CDC25C	101.25262130126117	0.03792372629710479	4				NaN	NaN	0	NaN	6104	2987	9088
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9094	25.574	NaN	22827	30	0	1831.9	0.037				-1	 	0	102	367.9091907652437	1100.705742895931	3	367.90972900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6105	2987	9088
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9095	25.574	NaN	22930	30	0	12073	0.138	+			40126	STPVAREL	8	74	436.74499674584916	871.4754405584983	2	436.7454833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STPVAREL_	ENSG00000058600|ENST00000299853|POLR3E;ENST00000564061.5_1_16:22308800-22337695:+|nuORF;nc|ENSG00000058600|Q9NVU0-2|POLR3E;nc|ENSG00000058600|Q9NVU0-3|POLR3E;nc|ENSG00000058600|Q9NVU0-4|POLR3E;nc|ENSG00000058600|Q9NVU0-5|POLR3E;POLR3E|p.G595Afs*51|1|0.33|ENSG00000058600|chr16:22326189-22326189|C/-|frameshift_variant	71.87747018426188	0.391254423828572	4				NaN	NaN	0	NaN	6106	2987	9088
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9113	25.613	NaN	28131	30	0	2888	0.214	+			20278	KENQVIVRM	9	95	558.8124337451068	1115.6103145570135	2	558.8135986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KENQVIVRM_	ENSG00000104413|ENST00000433389|ESRP1;ESRP1|p.L333Sfs*55|1|0.35|ENSG00000104413|chr8:94668009-94668009|G/-|frameshift_variant;ESRP1|p.N512Hfs*7|2|0.33|ENSG00000104413|chr8:94674383-94674384|AA/-|frameshift_variant;ESRP1|p.N512Kfs*8|1|0.48|ENSG00000104413|chr8:94674382-94674383|-/A|frameshift_variant;ESRP1|p.N512Tfs*2|2|0.36|ENSG00000104413|chr8:94674383-94674383|A/-|frameshift_variant;nc|ENSG00000104413|Q6NXG1-2|ESRP1;nc|ENSG00000104413|Q6NXG1-3|ESRP1;nc|ENSG00000104413|Q6NXG1-4|ESRP1;nc|ENSG00000104413|Q6NXG1-5|ESRP1	185.54966270084765	0.0007389233275946833	4				NaN	NaN	0	NaN	6121	2990	9112
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9114	25.617	NaN	13716	30	0	1841.9	0.106			+	47990	VSPRSVEI	8	87	443.7524304284994	885.4903079237988	2	443.75311279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSPRSVEI_	REV__sp|F5HBC6|PP71_HCMVMProteinpp71OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL82PE=3SV=1;REV__sp|P06726|PP71_HCMVAProteinpp71OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL82PE=1SV=2	58.78195531508484	0.5138399468736706	4				NaN	NaN	0	NaN	6122	2990	9112
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9115	25.619	NaN	26389	30	0	7971.4	0.106	+			32264	QTLPNAAYNNR	11	83	631.3168547309035	1260.619156528607	2	631.3179321289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QTLPNAAYNNR_	ENSG00000102837|ENST00000219022|OLFM4	160.8219353732433	5.249152120016251E-05	4				NaN	NaN	0	NaN	6123	2990	9112
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9116	25.62	NaN	13110	30	0	1721.2	0.106			+	48891	VVDGRRLAL	9	79	499.80834768425194	997.6021424353039	2	499.8087158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVDGRRLAL_	REV__ENSG00000214193|ENST00000453908|SH3D21;REV__nc|ENSG00000214193|A4FU49-3|SH3D21;REV__nc|ENSG00000214193|A4FU49-5|SH3D21;REV__nc|ENSG00000214193|A4FU49|SH3D21;REV__SH3D21|p.H471Tfs*31|1|0.4|ENSG00000214193|chr1:36320403-36320403|C/-|frameshift_variant	54.776311868738084	0.25715957988447635	4				NaN	NaN	0	NaN	6124	2990	9112
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9117	25.622	NaN	10862	30	0	6022.5	0.106				-1	 	0	48	333.54113844553183	997.6015859367956	3	333.54168701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6125	2990	9112
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9118	25.624	NaN	15006	30	0	3947.2	0.036	+			27795	MSCMCWPNS	9	92	537.679314357996	1073.3440757827918	2	537.6812744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_MSCM(Oxidation (M))CWPNS_	ENST00000450053.7_2_3:47030372-47030588:+|nuORF	44.377184641726394	0.36891676396732553	4				NaN	NaN	0	NaN	6126	2990	9112
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9119	25.625	NaN	11126	30	0	2103.7	0.14				-1	EALTALMSR	9	86	504.2621388290365	1006.509724724873	2	504.2629699707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_EALTALM(Oxidation (M))SR_	ENSG00000113812|ENST00000335754|ACTR8;ENST00000495993.1_1_3:53905208-53907064:-|nuORF;nc|ENSG00000113812|Q9H981-2|ACTR8;nc|ENSG00000113812|Q9H981-3|ACTR8	79.71258880314673	0.09879134589249085	4				NaN	NaN	0	NaN	6127	2990	9112
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9137	25.663	NaN	22676	30	0	3366.2	0.214	+			35521	SAVEPKTAL	9	83	458.26024099466207	914.5059290561242	2	458.2606506347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAVEPKTAL_	ENSG00000136153|ENST00000377534|LMO7;ENST00000563635.5_1_13:76195947-76378681:+|nuORF;LMO7|p.D282Mfs*3|1|0.16|ENSG00000136153|chr13:75807821-75807821|A/-|frameshift_variant;nc|ENSG00000136153|Q8WWI1-2|LMO7;nc|ENSG00000136153|Q8WWI1-3|LMO7;nc|ENSG00000136153|Q8WWI1-4|LMO7;nc|ENSG00000136153|Q8WWI1-5|LMO7;nc|ENSG00000136153|Q8WWI1|LMO7	104.0567914643314	0.03506238181059741	4				NaN	NaN	0	NaN	6142	2993	9136
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9138	25.667	NaN	45968	30	0	13184	0.106				-1	 	0	91	519.3081052646857	1036.6016575961712	2	519.308837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6143	2993	9136
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9139	25.669	NaN	9459.5	30	0	1074.7	0.106	+			16628	HHEELAAAL	9	76	495.7534751987194	989.4923974642388	2	495.75823974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HHEELAAAL_	ENST00000249601.8_1_10:49791013-49812893:-|nuORF;ENST00000435790.6_1_10:49791013-49860397:-|nuORF	50.0245360154114	0.3026755932229825	4				NaN	NaN	0	NaN	6144	2993	9136
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9140	25.671	NaN	14054	30	0	1778.7	0.106	+			36806	SIDVLLLTT	9	69	487.79213947463904	973.5697260160781	2	487.79248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SIDVLLLTT_	ENSG00000095564|ENST00000265990|BTAF1;nc|ENSG00000095564|O14981-2|BTAF1	24.20275056022122	0.577060078256802	4				NaN	NaN	0	NaN	6145	2993	9136
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9141	25.672	NaN	12755	30	0	4931.1	0.106	+			45634	TYRDVAIEFS	10	70	400.8676655426171	1199.5811672280513	3	400.8679504394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TYRDVAIEFS_	ZNF91|p.F15Y|1|0.38|ENSG00000167232|chr19:23374751-23374751|A/T|missense_variant	32.75053402867276	0.6123771875927935	4				NaN	NaN	0	NaN	6146	2993	9136
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9142	25.674	NaN	14437	30	0	2929.8	0.036			+	-1	DSGMSLLCIL	10	89	534.2595113183191	NaN	0	534.259521484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_DSGM(Oxidation (M))SLLCIL_	REV__DNAH5|p.F4486Lfs*7|2|0.23|ENSG00000039139|chr5:13701317-13701317|A/-|frameshift_variant;REV__DNAH5|p.I4068*|1|0.07|ENSG00000039139|chr5:13721077-13721077|T/-|frameshift_variant;REV__ENSG00000039139|ENST00000265104|DNAH5	60.97194046774394	0.22634118066553113	4				NaN	NaN	0	NaN	6147	2993	9136
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9143	25.675	NaN	3810.7	30	0	1126.3	0.144			+	37426	SLGSGLRRGR	10	54	353.5444619207483	1057.6115563624448	3	353.544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SLGSGLRRGR_	REV__ENST00000592495.1_1_19:11959591-11959708:+|nuORF	40.77816245573522	0.5419747034533848	4				NaN	NaN	0	NaN	6148	2993	9136
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9161	25.714	NaN	17733	30	0	2126	0.214	+			8584	EAYTDHATY	9	84	535.7244929892998	1069.4344330453996	2	535.7255249023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EAYTDHATY_	ENSG00000196576|ENST00000359337|PLXNB2;PLXNB2|p.G308Vfs*83|1|0.39|ENSG00000196576|chr22:50289664-50289664|G/-|frameshift_variant;PLXNB2|p.G872Vfs*42|1|0.08|ENSG00000196576|chr22:50283401-50283401|C/-|frameshift_variant;PLXNB2|p.L1362Rfs*32|1|0.1|ENSG00000196576|chr22:50280578-50280579|CA/-|frameshift_variant;PLXNB2|p.V873Cfs*66|1|0.2|ENSG00000196576|chr22:50283400-50283401|-/C|frameshift_variant;PLXNB2|p.V928Cfs*3|1|0.71|ENSG00000196576|chr22:50283084-50283084|C/-|frameshift_variant	90.77665401227738	0.06267569666681755	4				NaN	NaN	0	NaN	6163	2996	9160
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9162	25.718	NaN	9394.5	30	0	3072	0.106	+			35695	SDITIMFEETQ	11	75	438.5356775421766	1312.5852032267298	3	439.2528991699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SDITIMFEETQ_	ENSG00000130005|ENST00000252288|GAMT	19.1035232394073	0.7810393085260824	4				NaN	NaN	0	NaN	6164	2996	9160
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9163	25.72	NaN	10828	30	0	1751.6	0.106			+	44045	TPQARLFDATK	11	89	624.3401971534686	1246.665841373737	2	624.3410034179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TPQARLFDATK_	REV__ENST00000395255.7_1_10:64239676-64239931:+|nuORF	85.86182877749512	0.11571513784830015	4				NaN	NaN	0	NaN	6165	2996	9160
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9164	25.722	NaN	7890.8	30	0	3076.2	0.106			+	-1	ESKPMLYAI	9	48	356.5202391019253	1066.538887905976	3	356.520751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_ESKPM(Oxidation (M))LYAI_	REV__nc|ENSG00000158731|Q8NGY7|OR10J6P	39.252832667884924	0.4290233611298554	4				NaN	NaN	0	NaN	6166	2996	9160
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9165	25.723	NaN	6825.9	30	0	682.19	0.106	+			2073	ALASVVIHK	9	76	469.2945001941008	936.5744474550016	2	469.29486083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ALASVVIHK_	ENSG00000132436|ENST00000433017|FIGNL1;FIGNL1|p.K309Sfs*16|2|0.21|ENSG00000132436|chr7:50446362-50446362|T/-|frameshift_variant;nc|ENSG00000132436|Q6PIW4-2|FIGNL1	71.87747018426188	0.13267044672804276	4				NaN	NaN	0	NaN	6167	2996	9160
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9166	25.725	NaN	13949	30	0	698.94	0.035	+			42999	TEKKIQVGL	9	94	508.3101923226047	1014.6058317120094	2	508.3108825683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TEKKIQVGL_	ENSG00000044090|ENST00000265348|CUL7;nc|ENSG00000044090|Q14999-2|CUL7	106.68306549817024	0.032382560583716295	4				NaN	NaN	0	NaN	6168	2996	9160
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9167	25.726	NaN	8425.4	30	0	1280.3	0.142			+	48050	VSSEKIPSQGQ	11	84	580.3020714961913	1158.5895900591825	2	580.8082275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VSSEKIPSQGQ_	REV__ENST00000442358.5_1_1:158102111-158102970:-|nuORF	73.84112541714126	0.20371746787051248	4				NaN	NaN	0	NaN	6169	2996	9160
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9185	25.765	NaN	77762	30	0	17112	0.214				-1	 	0	101	354.8508809494452	1061.5308134485356	3	354.8514404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6184	2999	9184
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9186	25.769	NaN	45985	30	0	23311	0.106	+			10422	EVINDEQQAL	10	94	579.7842848353187	1157.5540167374372	2	579.784912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EVINDEQQAL_	ENSG00000183495|ENST00000389561|EP400;EP400|p.F1094Lfs*4|2|0.18|ENSG00000183495|chr12:132006849-132006849|T/-|frameshift_variant;EP400|p.L2071Rfs*37|1|0.23|ENSG00000183495|chr12:132043308-132043326|TCAAGAGTATTGAGTATCT/-|frameshift_variant;EP400|p.P2793Rfs*46|1|0.3|ENSG00000183495|chr12:132064707-132064707|C/-|frameshift_variant;EP400|p.Q1630Sfs*11|1|0.4|ENSG00000183495|chr12:132025670-132025670|C/-|frameshift_variant;nc|ENSG00000183495|Q96L91-4|EP400	45.02220120713402	0.5028680121232791	4				NaN	NaN	0	NaN	6185	2999	9184
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9187	25.771	NaN	14215	30	0	2599.8	0.106	+			778	AEFAERSVA	9	74	490.2454001816148	978.4762474300296	2	490.2454528808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEFAERSVA_	CON__Q3SX28;ENSG00000143549|ENST00000651641|TPM3;ENSG00000198467|ENST00000645482|TPM2;ENST00000397772.2_1_20:32500135-32500381:-|nuORF;ENST00000469717.5_1_1:154130117-154143232:-|nuORF;ENST00000600996.1_1_19:42012510-42012810:+|nuORF;nc|ENSG00000143549|P06753-2|TPM3;nc|ENSG00000143549|P06753-3|TPM3;nc|ENSG00000143549|P06753-4|TPM3;nc|ENSG00000143549|P06753-5|TPM3;nc|ENSG00000143549|P06753-6|TPM3;nc|ENSG00000143549|P06753-7|TPM3;nc|ENSG00000198467|P07951-2|TPM2;nc|ENSG00000198467|P07951-3|TPM2;TPM3|p.R239H|1|0.1|ENSG00000143549|chr1:154170459-154170459|C/T|missense_variant	109.82975700811294	0.02917171107062681	4				NaN	NaN	0	NaN	6186	2999	9184
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9188	25.773	NaN	10440	30	0	1607.4	0.106	+			50772	YEKQDTLLK	9	84	379.87628560980306	1136.6070274296092	3	379.87640380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YEKQDTLLK_	ENSG00000134910|ENST00000392708|STT3A;ENST00000534472.5_1_11:125465789-125479519:+|nuORF;STT3A|p.F106Sfs*45|2|0.41|ENSG00000134910|chr11:125602843-125602843|T/-|frameshift_variant	47.95952297671804	0.32689736945648856	4				NaN	NaN	0	NaN	6187	2999	9184
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9189	25.774	NaN	15420	30	0	1024.6	0.106			+	25987	LSKEYANK	8	87	476.7580718014644	951.5015906697288	2	476.7582092285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSKEYANK_	REV__MYH7|p.E1490K|1|0.41|ENSG00000092054|chr14:23417204-23417204|C/T|missense_variant	51.19269402634007	0.5868595481438337	4				NaN	NaN	0	NaN	6188	2999	9184
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9190	25.776	NaN	12334	30	0	1666.8	0.036	+			43005	TEKQESVQL	9	79	531.2772669566135	NaN	0	531.2772827148438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TEKQESVQL_	ENSG00000123607|ENST00000243344|TTC21B	86.88156770896713	0.04788281539324305	4				NaN	NaN	0	NaN	6189	2999	9184
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9191	25.777	NaN	11848	30	0	2020.5	0.145	+			8210	EADPTAVDPVL	11	63	376.1920055493831	1125.5541872483493	3	375.8923034667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EADPTAVDPVL_	PPRC1|p.G598D|1|0.38|ENSG00000148840|chr10:102140301-102140301|G/A|missense_variant	39.252832667884924	0.5681665794958463	4				NaN	NaN	0	NaN	6190	2999	9184
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9203	25.895	NaN	32140	30	0	4046.4	0.194	+			23053	KVTEGSFVYK	10	88	579.3129150872974	1156.6112772413946	2	579.3137817382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVTEGSFVYK_	ENSG00000057608|ENST00000380191|GDI2;GDI2|p.S222Afs*20|1|0.1|ENSG00000057608|chr10:5785197-5785197|T/-|frameshift_variant	223.3641303927214	9.136932883671575E-12	4				NaN	NaN	0	NaN	6199	3002	9202
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9204	25.898	NaN	39075	30	0	3389.7	0.106	+			1558	AGGASGSRAKR	11	96	509.2814867301994	1016.5484205271988	2	509.2820739746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AGGASGSRAKR_	ENSG00000105538|ENST00000222145|RASIP1	75.04331003522576	0.19369523587789836	4				NaN	NaN	0	NaN	6200	3002	9202
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9205	25.9	NaN	37596	30	0	8171.1	0.106	+			40083	STNSFALNK	9	101	491.25276741090084	980.4909818886017	2	491.2532043457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STNSFALNK_	BPTF|p.D2844Afs*20|1|0.08|ENSG00000171634|chr17:67959766-67959767|-/C|frameshift_variant;BPTF|p.K2718Nfs*36|3|0.12|ENSG00000171634|chr17:67948150-67948150|A/-|frameshift_variant;ENSG00000171634|ENST00000306378|BPTF;ENST00000579209.1_1_17:62758032-62758825:-|nuORF;nc|ENSG00000171634|Q12830-4|BPTF;nc|ENSG00000171634|Q12830|BPTF	131.61620852596164	0.014413238321579053	4				NaN	NaN	0	NaN	6201	3002	9202
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9206	25.902	NaN	17150	30	0	4033	0.106	+			15106	GTQPGPLLK	9	78	455.77093932503305	909.5273257168661	2	455.77117919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTQPGPLLK_	ENSG00000123243|ENST00000397146|ITIH5;ENST00000476417.5_1_10:7615057-7659255:-|nuORF;ENST00000492668.5_1_10:7611547-7618533:-|nuORF;ITIH5|p.L690*|1|0.49|ENSG00000123243|chr10:7569749-7569749|G/-|frameshift_variant;nc|ENSG00000123243|Q86UX2-2|ITIH5;nc|ENSG00000123243|Q86UX2-3|ITIH5;nc|ENSG00000123243|Q86UX2-4|ITIH5;nc|ENSG00000123243|Q86UX2|ITIH5	107.00750918261382	0.032051501805654005	4				NaN	NaN	0	NaN	6202	3002	9202
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9207	25.903	NaN	27308	30	0	4004.7	0.106			+	-1	NVGCDMAL	8	93	440.1878502793167	878.3611476254334	2	440.1883850097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_NVGC(Carbamidomethyl (C))DMAL_	REV__ENSG00000165140|ENST00000375326|FBP1;REV__FBP1|p.G294Efs*11|1|0.11|ENSG00000165140|chr9:94603517-94603517|C/-|frameshift_variant	44.116797842482775	0.6307669463330267	4				NaN	NaN	0	NaN	6203	3002	9202
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9208	25.905	NaN	14151	30	0	1381.4	0.106			+	8662	EDSKLGLGKI	10	85	530.305447067604	1058.5963412020078	2	530.30615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EDSKLGLGKI_	REV__ENSG00000242110|ENST00000335606|AMACR;REV__nc|ENSG00000242110|Q9UHK6-5|AMACR	70.8162118820467	0.27065172005956	4				NaN	NaN	0	NaN	6204	3002	9202
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9209	25.907	NaN	10872	30	0	1278.2	0.036	+			31886	QQAMRYLR	8	84	533.2842456386655	1064.553938344131	2	533.2850341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QQAMRYLR_	ENSG00000130052|ENST00000374599|STARD8;ENSG00000164741|ENST00000276297|DLC1;nc|ENSG00000130052|Q92502|STARD8;nc|ENSG00000164741|Q96QB1-1|DLC1;nc|ENSG00000164741|Q96QB1-4|DLC1;nc|ENSG00000164741|Q96QB1-6|DLC1;STARD8|p.A874Sfs*16|1|0.42|ENSG00000130052|chrX:68723677-68723678|-/C|frameshift_variant;STARD8|p.L976Afs*8|1|0.27|ENSG00000130052|chrX:68724090-68724091|-/G|frameshift_variant	57.81127852772723	0.5234495074909924	4				NaN	NaN	0	NaN	6205	3002	9202
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9227	25.945	NaN	82671	30	0	17340	0.172				-1	 	0	73	425.2445749749104	848.4745970166208	2	425.2449645996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6220	3005	9226
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9228	25.948	NaN	50635	30	0	7992.8	0.106	+			1763	AIANFTNQK	9	87	503.768847661492	1005.523142389784	2	503.7694396972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AIANFTNQK_	ENSG00000138756|ENST00000502613|BMP2K;nc|ENSG00000138756|Q9NSY1-2|BMP2K;nc|ENSG00000138756|Q9NSY1-3|BMP2K	185.71840793949184	0.0007219834064317508	4				NaN	NaN	0	NaN	6221	3005	9226
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9229	25.95	NaN	20341	30	0	4595.7	0.106	+			46939	VIYNEQMASK	10	93	591.794012949966	1181.573472966732	2	591.7951049804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VIYNEQMASK_	ENSG00000185432|ENST00000332160|METTL7A	167.93327368760816	0.004342583126626421	4				NaN	NaN	0	NaN	6222	3005	9226
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9230	25.951	NaN	30339	30	0	2954.2	0.106	+			42706	TDAVVKHVL	9	93	491.28958386765436	980.5646148021087	2	491.28985595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TDAVVKHVL_	ENSG00000122218|ENST00000241704|COPA;nc|ENSG00000122218|P53621-2|COPA	84.9155231211612	0.07920012719736333	4				NaN	NaN	0	NaN	6223	3005	9226
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9231	25.953	NaN	34145	30	0	13103	0.106	+			21202	KLEDGPKFLK	10	86	392.23245375113595	1173.675531853608	3	392.2327575683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KLEDGPKFLK_	ENSG00000156508|ENST00000309268|EEF1A1;ENST00000417549.1_1_13:28789725-28790031:+|nuORF;ENST00000436459.2_1_9:135895553-135896258:+|nuORF;ENST00000513637.1_1_5:43495177-43495438:-|nuORF;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	92.23892857375223	0.11825556496531454	4				NaN	NaN	0	NaN	6224	3005	9226
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9232	25.955	NaN	18346	30	0	2215.9	0.106	+			20146	KEKPPITVV	9	77	505.8153318125936	1009.6161106919873	2	505.8159484863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KEKPPITVV_	ENSG00000141127|ENST00000268835|PRPSAP2;ENSG00000161542|ENST00000446526|PRPSAP1;ENST00000472686.1_1_17:74309820-74324990:-|nuORF;ENST00000592474.1_1_17:74309820-74309979:-|nuORF;nc|ENSG00000141127|O60256-2|PRPSAP2;nc|ENSG00000141127|O60256-3|PRPSAP2;nc|ENSG00000141127|O60256-4|PRPSAP2;nc|ENSG00000161542|Q14558|PRPSAP1	72.87924865735499	0.12833875048249987	4				NaN	NaN	0	NaN	6225	3005	9226
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9233	25.957	NaN	7671.8	30	0	621.76	0.034	+			15691	GVMVGMGQK	9	65	453.7293294635366	905.4441059938732	2	453.7303161621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GVMVGMGQK_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENST00000457622.1_1_6:46172676-46173294:+|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000473016.1_1_2:74120109-74129648:+|nuORF;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000488967.5_1_10:90706975-90712518:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF	88.64286706044652	0.06869153472052109	4				NaN	NaN	0	NaN	6226	3005	9226
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9251	25.994	NaN	29762	30	0	3373.8	0.214				-1	 	0	96	521.8214126697361	1041.6282724062721	2	521.8222045898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6241	3008	9250
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9252	25.997	NaN	46437	30	0	10164	0.106			+	28370	NELATISGAV	10	90	487.76105872425484	NaN	0	487.76104736328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NELATISGAV_	REV__tr|U7SSK2|U7SSK2_FUSNUProbablelipidIIflippaseMurJOS=FusobacteriumnucleatumCTI-5OX=1316586GN=murJPE=3SV=1	77.31757898189308	0.11266207027252037	4				NaN	NaN	0	NaN	6242	3008	9250
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9253	25.999	NaN	15326	30	0	3111.8	0.106	+			12966	GETGLGKSTL	10	77	481.7607278788827	961.5069028245654	2	481.7610778808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GETGLGKSTL_	ENSG00000125354|ENST00000394610|SEPTIN6;nc|ENSG00000125354|Q14141-3|SEPTIN6;nc|ENSG00000125354|Q14141-4|SEPTIN6;nc|ENSG00000125354|Q14141|SEPTIN6	128.60217544463768	0.01518043149187549	4				NaN	NaN	0	NaN	6243	3008	9250
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9254	26.001	NaN	28821	30	0	3559.9	0.106			+	-1	GCCRCCCR	8	97	537.679314357996	1073.3440757827918	2	537.6812133789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	3 Carbamidomethyl (C)	_GC(Carbamidomethyl (C))C(Carbamidomethyl (C))RC(Carbamidomethyl (C))CCR_	REV__ENST00000243776.10_1_2:220408184-220408394:-|nuORF	20.481830146152948	0.8005983782650069	4				NaN	NaN	0	NaN	6244	3008	9250
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9255	26.003	NaN	34820	30	0	13641	0.106	+			32524	QVQVVLNQK	9	87	528.3135976966228	1054.6126424600454	2	528.3143310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QVQVVLNQK_	ENSG00000140688|ENST00000327237|RUSF1;ENST00000568491.1_1_16:31502158-31504599:-|nuORF;nc|ENSG00000140688|Q96GQ5-2|RUSF1	166.78253343968296	0.0033161236045811926	4				NaN	NaN	0	NaN	6245	3008	9250
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9256	26.005	NaN	41393	30	0	8600.6	0.033				-1	 	0	93	451.73207269041575	901.4495924476315	2	451.7323303222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6246	3008	9250
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9257	26.005	NaN	18780	30	0	2690.7	0.14			+	17440	IAVGVDNENQ	10	102	529.759194362899	1057.503835792598	2	529.7597045898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IAVGVDNENQ_	REV__ENST00000429105.1_1_1:224762276-224762375:+|nuORF	47.657333605630114	0.47858658696240314	4				NaN	NaN	0	NaN	6247	3008	9250
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9275	26.045	NaN	55008	30	0	8669.2	0.196			+	5796	AVHPAMNLGS	10	100	498.75101496201177	995.4874769908236	2	499.25091552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVHPAMNLGS_	REV__ENSG00000154914|ENST00000285199|USP43;REV__nc|ENSG00000154914|Q70EL4-2|USP43;REV__nc|ENSG00000154914|Q70EL4-3|USP43;REV__nc|ENSG00000154914|Q70EL4-4|USP43;REV__USP43|p.V1023Sfs*4|1|0.39|ENSG00000154914|chr17:9728679-9728679|C/-|frameshift_variant	40.77816245573522	0.5419747034533848	4				NaN	NaN	0	NaN	6262	3011	9274
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9276	26.048	NaN	44067	30	0	30724	0.106	+			1766	AIAQAESLRYK	11	71	417.2343572497733	1248.68124234952	3	417.23480224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AIAQAESLRYK_	ENSG00000149273|ENST00000531188|RPS3;ENST00000433853.1_1_3:183867695-183868220:+|nuORF;ENST00000487417.1_1_12:62415587-62415818:-|nuORF;nc|ENSG00000149273|P23396-2|RPS3	42.33807565288922	0.5259510355945483	4				NaN	NaN	0	NaN	6263	3011	9274
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9277	26.05	NaN	51567	30	0	8057.1	0.106				-1	 	0	94	490.26855272234064	978.5225525114813	2	490.2687683105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6264	3011	9274
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9278	26.052	NaN	14992	30	0	1370.6	0.106	+			15772	GVTALACGMIA	11	72	503.7569971828988	NaN	0	503.7566223144531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GVTALACGMIA_	ENSG00000175166|ENST00000310118|PSMD2;ENST00000451892.1_1_1:240307039-240307453:-|nuORF;nc|ENSG00000175166|Q13200-2|PSMD2;nc|ENSG00000175166|Q13200-3|PSMD2	63.30626980617807	0.20109269775019145	4				NaN	NaN	0	NaN	6265	3011	9274
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9279	26.054	NaN	18638	30	0	1669	0.106	+			50689	YEENAKAEL	9	91	533.7561083030397	1065.4976636728793	2	533.756591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YEENAKAEL_	BBS2|p.F575Lfs*8|1|0.19|ENSG00000125124|chr16:56497815-56497815|A/-|frameshift_variant;ENSG00000125124|ENST00000245157|BBS2	96.0336014099291	0.047854655524928534	4				NaN	NaN	0	NaN	6266	3011	9274
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9280	26.055	NaN	10402	30	0	1205.3	0.106			+	24088	LEKGLKEA	8	73	444.2631050928959	886.5116572525918	2	444.2633361816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LEKGLKEA_	REV__DDIAS|p.L534Yfs*16|2|0.29|ENSG00000165490|chr11:82932934-82932934|T/-|frameshift_variant;REV__ENSG00000165490|ENST00000533655|DDIAS	104.0567914643314	0.248440647781298	4				NaN	NaN	0	NaN	6267	3011	9274
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9281	26.057	NaN	7026	30	0	875.81	0.034	+			7993	DTATLSGPR	9	81	459.2373916294344	916.4602303256688	2	459.23779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DTATLSGPR_	ENSG00000048707|ENST00000620676|VPS13D;nc|ENSG00000048707|Q5THJ4-2|VPS13D	39.252832667884924	0.4290233611298554	4				NaN	NaN	0	NaN	6268	3011	9274
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9299	26.094	NaN	35741	30	0	3895.8	0.214	+			49919	VYVDKVEKM	9	74	555.7965863155862	1109.5786196979723	2	555.7974243164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYVDKVEKM_	AMOT|p.L850Cfs*59|1|0.13|ENSG00000126016|chrX:112779606-112779606|G/-|frameshift_variant;ENSG00000126016|ENST00000371959|AMOT;nc|ENSG00000126016|Q4VCS5-2|AMOT	109.43880257439609	0.029570636687953285	4				NaN	NaN	0	NaN	6283	3014	9298
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9300	26.098	NaN	39381	30	0	13447	0.106	+			14975	GTMTGMLYK	9	83	509.24144773149504	1016.4683425297901	2	509.24169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_GTM(Oxidation (M))TGMLYK_	ENSG00000178440|ENST00000651763|TIMM23B-AGAP6;ENSG00000204152|ENST00000651259|TIMM23B;ENSG00000265354|ENST00000580018|TIMM23;nc|ENSG00000204152|Q5SRD1-2|TIMM23B	118.74307786436346	0.02196067127630568	4				NaN	NaN	0	NaN	6284	3014	9298
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9301	26.1	NaN	51309	30	0	6101.4	0.106				-1	 	0	100	544.2738763403887	1086.5331997475773	2	544.2750854492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6285	3014	9298
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9302	26.101	NaN	8542.5	30	0	1198.2	0.106	+			42000	SVYITLKK	8	72	476.29682965467754	950.5791063761551	2	476.29718017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVYITLKK_	ENSG00000140319|ENST00000267884|SRP14;ENST00000558243.1_1_15:40330963-40331317:-|nuORF;ENST00000558527.5_1_15:40329525-40331317:-|nuORF;ENST00000559475.5_1_15:40329218-40331146:-|nuORF	76.7741389293348	0.3504530765139327	4				NaN	NaN	0	NaN	6286	3014	9298
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9303	26.103	NaN	46423	30	0	12767	0.106				-1	 	0	83	413.91458900657835	1238.721937619935	3	413.91510009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6287	3014	9298
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9304	26.105	NaN	15485	30	0	2338.9	0.034				-1	 	0	69	460.21251892577516	918.4104849183503	2	460.2129821777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6288	3014	9298
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9305	26.106	NaN	21706	30	0	2503.6	0.14	+			1212	AEQKLQQTL	9	87	529.795993042629	1057.577433152058	2	529.7963256835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AEQKLQQTL_	ENSG00000131626|ENST00000253925|PPFIA1;nc|ENSG00000131626|Q13136-2|PPFIA1	65.15724298150197	0.17062369902793603	4				NaN	NaN	0	NaN	6289	3014	9298
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9323	26.144	NaN	44482	30	0	21678	0.214				-1	RVAEACKY	8	96	498.75101496201177	995.4874769908236	2	498.7535095214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_RVAEAC(Carbamidomethyl (C))KY_	ENSG00000117501|ENST00000367759|MROH9;MROH9|p.L759*|1|0.19|ENSG00000117501|chr1:171025412-171025412|T/-|frameshift_variant;MROH9|p.L824Cfs*10|1|0.03|ENSG00000117501|chr1:171064224-171064224|T/-|frameshift_variant	73.97473282117947	0.3737790450121076	4				NaN	NaN	0	NaN	6304	3017	9322
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9324	26.148	NaN	18305	30	0	6839.1	0.106	+			3950	ATATGTEILK	10	85	502.7842538998014	1003.5539548664028	2	502.78485107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATATGTEILK_	ENSG00000159593|ENST00000290810|NAE1;ENST00000562757.5_1_16:66857380-66864856:-|nuORF;ENST00000563419.5_1_16:66858748-66864862:-|nuORF;ENST00000564040.6_1_16:66857135-66864856:-|nuORF;ENST00000569963.1_1_16:66860370-66864856:-|nuORF;nc|ENSG00000159593|Q13564-2|NAE1;nc|ENSG00000159593|Q13564-4|NAE1	185.71840793949184	0.0006636498492458346	4				NaN	NaN	0	NaN	6305	3017	9322
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9325	26.15	NaN	32623	30	0	4518.8	0.106				-1	 	0	76	416.21347338427233	830.4123938353447	2	416.21392822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6306	3017	9322
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9326	26.152	NaN	20236	30	0	4625.2	0.106				-1	VMVSYPTM	8	75	480.21404755065953	958.4135421681191	2	480.21435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Oxidation (M)	_VM(Oxidation (M))VSYPTM(Oxidation (M))_	ENSG00000172995|ENST00000684406|ARPP21;ENST00000476052.1_1_3:35833836-35835447:+|nuORF;nc|ENSG00000172995|Q9UBL0-3|ARPP21;nc|ENSG00000172995|Q9UBL0-4|ARPP21;nc|ENSG00000172995|Q9UBL0-5|ARPP21;nc|ENSG00000172995|Q9UBL0|ARPP21	54.76467175910256	0.5536104764165384	4				NaN	NaN	0	NaN	6307	3017	9322
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9327	26.153	NaN	17107	30	0	3316.2	0.106	+			19980	KEHVIEAL	8	79	469.76891735890655	937.5232817846131	2	469.7687683105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEHVIEAL_	ENSG00000147403|ENST00000369817|RPL10;ENST00000431607.1_1_9:119942983-119943337:-|nuORF;ENST00000444036.1_1_21:34213912-34214044:-|nuORF;ENST00000467168.5_1_X:153626860-153629039:+|nuORF;ENST00000491035.5_1_X:153628724-153629192:+|nuORF;RPL10L|p.E145K|1|0.08|ENSG00000165496|chr14:46651304-46651304|C/T|missense_variant	143.8867514904718	0.2724165679903577	4				NaN	NaN	0	NaN	6308	3017	9322
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9328	26.155	NaN	19566	30	0	1653.6	0.035	+			42868	TEGQVVNKL	9	83	494.27651140797474	986.5384698827495	2	494.2769775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TEGQVVNKL_	ENSG00000183963|ENST00000333137|SMTN;ENST00000460658.5_1_22:31484094-31491444:+|nuORF;ENST00000489337.5_1_22:31484532-31494796:+|nuORF;nc|ENSG00000183963|P53814-6|SMTN;nc|ENSG00000183963|P53814|SMTN;SMTN|p.A318Pfs*39|1|0.29|ENSG00000183963|chr22:31090967-31090967|C/-|frameshift_variant;SMTN|p.G455Afs*3|1|0.38|ENSG00000183963|chr22:31091383-31091383|G/-|frameshift_variant;SMTN|p.L317Pfs*24|1|0.4|ENSG00000183963|chr22:31090966-31090967|-/C|frameshift_variant;SMTN|p.S536Vfs*33|1|0.33|ENSG00000183963|chr22:31091813-31091813|C/-|frameshift_variant	120.8684288430529	0.02067403653475984	4				NaN	NaN	0	NaN	6309	3017	9322
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9329	26.156	NaN	17922	30	0	1741.7	0.141	+			12882	GERLNQDQL	9	95	536.772559946359	1071.530566959518	2	536.7734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GERLNQDQL_	ENSG00000135387|ENST00000341394|CAPRIN1;nc|ENSG00000135387|Q14444-2|CAPRIN1	89.02883481214508	0.06760336634167786	4				NaN	NaN	0	NaN	6310	3017	9322
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9347	26.195	NaN	19663	30	0	1448.6	0.214	+			34991	SAASEQHVF	9	87	488.2297147185959	974.4448765039918	2	488.2298583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAASEQHVF_	DHX38|p.A739Pfs*17|1|0.38|ENSG00000140829|chr16:72105086-72105086|G/-|frameshift_variant;DHX38|p.G603Efs*22|1|0.36|ENSG00000140829|chr16:72103767-72103767|G/-|frameshift_variant;DHX38|p.G697Wfs*16|1|0.38|ENSG00000140829|chr16:72104557-72104558|-/T|frameshift_variant;ENSG00000140829|ENST00000268482|DHX38;nc|ENSG00000140829|Q92620-2|DHX38	109.47833844074708	0.029530294723441826	4				NaN	NaN	0	NaN	6325	3020	9346
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9348	26.199	NaN	18494	30	0	3987.1	0.106	+			27207	MEHAMETM	8	90	490.18676007802185	978.3589672228437	2	490.1874084472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MEHAMETM_	ENSG00000197747|ENST00000368811|S100A10;ENST00000478348.1_1_1:151957748-151958706:-|nuORF;ENST00000478574.5_1_1:151956596-151958706:-|nuORF	97.47269410471826	0.25484828363392314	4				NaN	NaN	0	NaN	6326	3020	9346
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9349	26.201	NaN	18093	30	0	6132.2	0.106	+			2240	ALSTPVVEK	9	78	472.2762533985278	942.5379538638556	2	472.2762756347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ALSTPVVEK_	ENSG00000197265|ENST00000355904|GTF2E2	69.6276240434122	0.14239879520340665	4				NaN	NaN	0	NaN	6327	3020	9346
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9350	26.203	NaN	19760	30	0	9894.1	0.106	+			8798	EEKKIKVIL	9	75	550.3576428331273	1098.7007327330546	2	550.3580932617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EEKKIKVIL_	ENSG00000162434|ENST00000342505|JAK1;JAK1|p.K860Nfs*16|3|0.29|ENSG00000162434|chr1:64841314-64841314|T/-|frameshift_variant	101.60071028292904	0.0375685401170269	4				NaN	NaN	0	NaN	6328	3020	9346
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9351	26.204	NaN	46092	30	0	5707.2	0.106	+			45755	VAEENTRVL	9	90	515.7799797071576	1029.5454064811152	2	515.7799072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VAEENTRVL_	ENSG00000156256|ENST00000399976|USP16;ENST00000485067.1_1_21:30426080-30426505:+|nuORF;nc|ENSG00000156256|Q9Y5T5-2|USP16;nc|ENSG00000156256|Q9Y5T5-3|USP16;nc|ENSG00000156256|Q9Y5T5-4|USP16	112.10723106719422	0.02684780151337622	4				NaN	NaN	0	NaN	6329	3020	9346
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9352	26.206	NaN	8287	30	0	862.61	0.034	+			20476	KEYAVNEV	8	67	476.2420470898758	950.4695412465517	2	476.2422180175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KEYAVNEV_	ENSG00000123562|ENST00000441076|MORF4L2;ENSG00000185787|ENST00000426013|MORF4L1;ENST00000447135.2_1_4:174537089-174537971:-|nuORF;ENST00000525966.1_1_11:14695245-14695548:-|nuORF;ENST00000560710.1_1_15:79184565-79186592:+|nuORF;nc|ENSG00000185787|Q9UBU8-3|MORF4L1;nc|ENSG00000185787|Q9UBU8|MORF4L1	96.0336014099291	0.25920480862606965	4				NaN	NaN	0	NaN	6330	3020	9346
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9353	26.207	NaN	11798	30	0	1968.1	0.14	+			12476	GEDRSPPTAL	10	83	521.7630084244228	1041.5114639156454	2	521.7620239257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GEDRSPPTAL_	ENSG00000079277|ENST00000371945|MKNK1;nc|ENSG00000079277|Q9BUB5-2|MKNK1;nc|ENSG00000079277|Q9BUB5|MKNK1	48.601550744091256	0.46988609897316763	4				NaN	NaN	0	NaN	6331	3020	9346
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9369	26.242	NaN	21483	30	0	4772.7	0.214	+			15806	GVVQPGRSL	9	70	456.7661890350979	911.5178251369958	2	456.76654052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVVQPGRSL_	nc|ENSG00000211955|P01772|IGHV3-33;nc|ENSG00000211955|P0DP02|IGHV3-30-3;nc|ENSG00000270550|P0DP03|IGHV3-30-5	54.776311868738084	0.25715957988447635	4				NaN	NaN	0	NaN	6344	3023	9368
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9370	26.246	NaN	30049	30	0	6108	0.106	+			39180	SSYPVCVSK	9	77	485.23847387529156	968.4623948173831	2	485.2389221191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSYPVCVSK_	ENSG00000089127|ENST00000202917|OAS1;ENST00000549820.1_1_12:113344820-113354315:+|nuORF;nc|ENSG00000089127|P00973-2|OAS1;nc|ENSG00000089127|P00973-3|OAS1;nc|ENSG00000089127|P00973-4|OAS1;OAS1|p.N280Tfs*8|1|0.07|ENSG00000089127|chr12:112916689-112916689|A/-|frameshift_variant	104.01359247289065	0.03510646158778409	4				NaN	NaN	0	NaN	6345	3023	9368
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9371	26.247	NaN	9939.6	30	0	3284.9	0.106			+	11115	FFPDRDQPPP	10	82	608.2949396362178	1214.5753263392355	2	608.2969360351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FFPDRDQPPP_	REV__ENSG00000184863|ENST00000401878|RBM33;REV__ENST00000307403.6_1_7:155500050-155531112:+|nuORF;REV__RBM33|p.G1030Afs*52|1|0.29|ENSG00000184863|chr7:155763915-155763915|G/-|frameshift_variant;REV__RBM33|p.L1031Pfs*109|1|0.35|ENSG00000184863|chr7:155763914-155763915|-/G|frameshift_variant;REV__RBM33|p.P840Qfs*31|1|0.17|ENSG00000184863|chr7:155745138-155745138|C/-|frameshift_variant;REV__RBM33|p.T776Qfs*17|1|0.24|ENSG00000184863|chr7:155742091-155742091|A/-|frameshift_variant	42.86426827375447	0.522752283233888	4				NaN	NaN	0	NaN	6346	3023	9368
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9372	26.249	NaN	5239.8	30	0	1250.7	0.106			+	33374	RHRVQLAQ	8	44	336.53385173438676	1006.5797258033604	3	336.5343017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RHRVQLAQ_	REV__nc|ENSG00000132000|Q6PEZ8-2|PODNL1;REV__nc|ENSG00000132000|Q6PEZ8-3|PODNL1;REV__nc|ENSG00000132000|Q6PEZ8|PODNL1	19.359975847455235	0.7988239741663654	4				NaN	NaN	0	NaN	6347	3023	9368
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9373	26.251	NaN	10389	30	0	2880.7	0.106			+	-1	IAYPGLLMVP	10	70	363.87292804151167	1088.596954724735	3	363.8731994628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_IAYPGLLM(Oxidation (M))VP_	REV__ENST00000280606.6_1_16:31097395-31098001:-|nuORF;REV__PRSS53|p.V111Wfs*148|1|0.27|ENSG00000151006|chr16:31086810-31086810|C/-|frameshift_variant	24.519189625965996	0.6795976720565101	4				NaN	NaN	0	NaN	6348	3023	9368
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9374	26.253	NaN	5164	30	0	346.79	0.036			+	26646	LVDVVMEYI	9	77	540.7847293631645	1079.554905793129	2	540.7861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LVDVVMEYI_	REV__ENSG00000070214|ENST00000374720|SLC44A1;REV__nc|ENSG00000070214|Q8WWI5-2|SLC44A1;REV__nc|ENSG00000070214|Q8WWI5-3|SLC44A1	39.252832667884924	0.4290233611298554	4				NaN	NaN	0	NaN	6349	3023	9368
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9375	26.254	NaN	4326.1	30	0	523.71	0.144	+			46761	VGSVFSLRSE	10	56	360.86060010699254	1079.5599709211776	3	360.861083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VGSVFSLRSE_	ENST00000242592.8_1_12:121177481-121177736:+|nuORF	27.882242232435846	0.6521336255503853	4				NaN	NaN	0	NaN	6350	3023	9368
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9390	26.287	NaN	171940	30	0	23399	0.146	+			48502	VTNDGATILK	10	84	516.2892611469035	1030.563969360607	2	516.2896118164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTNDGATILK_	ENSG00000166226|ENST00000299300|CCT2;ENST00000546859.5_1_12:69979244-69981900:+|nuORF;ENST00000550455.5_1_12:69979244-69981425:+|nuORF;ENST00000550638.5_1_12:69979244-69982049:+|nuORF;ENST00000551620.5_1_12:69979244-69983508:+|nuORF;nc|ENSG00000166226|P78371-2|CCT2	125.68205650279488	0.01930466848182481	4				NaN	NaN	0	NaN	6362	3026	9389
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9391	26.289	NaN	26055	30	0	4431.9	0.106	+			44881	TTVPHVFSK	9	100	508.2814473663512	1014.5483417995024	2	508.2826232910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTVPHVFSK_	ENSG00000095015|ENST00000399503|MAP3K1	98.58198989935565	0.04066992115528678	4				NaN	NaN	0	NaN	6363	3026	9389
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9392	26.291	NaN	35689	30	0	14527	0.106				-1	 	0	69	364.55673133551505	1090.6483646067452	3	364.55731201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6364	3026	9389
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9393	26.293	NaN	8075.6	30	0	921.35	0.106	+			24568	LGNGLRQSI	9	77	479.2770330785836	956.5395132239672	2	479.27728271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LGNGLRQSI_	ENSG00000167114|ENST00000300456|SLC27A4;SLC27A4|p.L457Cfs*36|2|0.21|ENSG00000167114|chr9:128355093-128355093|C/-|frameshift_variant	75.04331003522576	0.118981335847003	4				NaN	NaN	0	NaN	6365	3026	9389
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9394	26.295	NaN	7507.8	30	0	1393.9	0.106	+			13948	GSADTIQIGK	10	82	495.2657216977729	988.5168904623458	2	495.26666259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GSADTIQIGK_	ENST00000552975.5_1_12:47599848-47610169:-|nuORF	65.15724298150197	0.31893571707528906	4				NaN	NaN	0	NaN	6366	3026	9389
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9395	26.297	NaN	22186	30	0	6793.3	0.106			+	47971	VSPDAALK	8	79	400.72894603481666	799.4433391364333	2	400.7294006347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VSPDAALK_	REV__ENSG00000137944|ENST00000260508|KYAT3;REV__ENST00000446900.6_1_1:89430347-89454033:-|nuORF;REV__nc|ENSG00000137944|Q6YP21-2|KYAT3;REV__nc|ENSG00000137944|Q6YP21-3|KYAT3	76.84663266511073	0.3498490246073164	4				NaN	NaN	0	NaN	6367	3026	9389
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9396	26.299	NaN	4905.2	30	0	1025.1	0.038	+			49119	VVLNQINKNF	10	59	396.89710665342596	1187.669490560478	3	396.8974304199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VVLNQINKNF_	tr|U7SN32|U7SN32_FUSNURibbon-helix-helixproteinCopGdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01849PE=4SV=1	44.377184641726394	0.5088115166961078	4				NaN	NaN	0	NaN	6368	3026	9389
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9414	26.336	NaN	115130	30	0	38638	0.194				-1	 	0	86	401.2446721024711	800.4747912717422	2	401.2449951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6383	3029	9413
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9415	26.34	NaN	31206	30	0	4217.1	0.106			+	31564	QLNSIHFSL	9	92	529.7858550225176	1057.557157111835	2	529.7870483398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QLNSIHFSL_	REV__ENSG00000185499|ENST00000620103|MUC1;REV__nc|ENSG00000185499|P15941-13|MUC1;REV__nc|ENSG00000185499|P15941-2|MUC1;REV__nc|ENSG00000185499|P15941-3|MUC1;REV__nc|ENSG00000185499|P15941-4|MUC1;REV__nc|ENSG00000185499|P15941-5|MUC1;REV__nc|ENSG00000185499|P15941-8|MUC1;REV__nc|ENSG00000185499|P15941-9|MUC1;REV__nc|ENSG00000185499|P15941|MUC1	79.45101966838831	0.09992237243120712	4				NaN	NaN	0	NaN	6384	3029	9413
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9416	26.342	NaN	14781	30	0	1425.1	0.106			+	-1	SAQVHSPEL	9	91	505.25082191369455	NaN	0	505.25079345703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SAQVHSPEL_	REV__ENSG00000186895|ENST00000334134|FGF3;REV__FGF3|p.D218N|1|0.1|ENSG00000186895|chr11:69810373-69810373|C/T|missense_variant	58.78195531508484	0.1545138866451181	4				NaN	NaN	0	NaN	6385	3029	9413
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9417	26.343	NaN	17868	30	0	5824.8	0.106			+	9706	EMISLVLLM	9	72	524.7921158459434	1047.5696787586867	2	524.79296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EMISLVLLM_	REV__ENST00000492366.5_1_4:104012383-104013811:-|nuORF	50.0245360154114	0.3026755932229825	4				NaN	NaN	0	NaN	6386	3029	9413
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9418	26.345	NaN	20849	30	0	4464.3	0.106				-1	 	0	86	460.2578535719632	918.5011542107264	2	460.2581787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6387	3029	9413
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9419	26.347	NaN	3614.9	30	0	510.68	0.106			+	43991	TPGQGWHRW	9	66	562.7706313744446	1123.5267098156892	2	563.275146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TPGQGWHRW_	REV__L1PA8_dup4178|chr8:94121319-94127043:-|4.057818296907117|0.2856926403965029|3.83|481.0|232|1|anti-sense	27.882242232435846	0.5426732730940306	4				NaN	NaN	0	NaN	6388	3029	9413
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9420	26.349	NaN	4880.2	30	0	366.33	0.034			+	21829	KRFLGATL	8	71	453.28157614904364	904.5485993648873	2	453.28204345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KRFLGATL_	REV__ENST00000225724.9_1_17:28849705-28849786:+|nuORF	38.80614096846853	0.6637206697844082	4				NaN	NaN	0	NaN	6389	3029	9413
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9438	26.386	NaN	27338	30	0	2998.8	0.214				-1	 	0	94	569.2873274787956	1136.5601020243912	2	569.2885131835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6404	3032	9437
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9439	26.39	NaN	65534	30	0	16288	0.106				-1	 	0	98	350.8714085993073	1049.592396398122	3	350.8720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6405	3032	9437
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9440	26.392	NaN	23493	30	0	2878.4	0.106	+			35580	SAYGSVKAY	9	86	473.236994206835	944.45943548047	2	473.2372741699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAYGSVKAY_	ENSG00000182718|ENST00000451270|ANXA2;ENST00000557937.5_1_15:60655071-60678274:-|nuORF;nc|ENSG00000182718|P07355-2|ANXA2;nc|ENSG00000231991|A6NMY6|ANXA2P2;NPTN-ANXA2|1|fusion	101.25262130126117	0.03792372629710479	4				NaN	NaN	0	NaN	6406	3032	9437
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9441	26.394	NaN	46373	30	0	4439.4	0.106				-1	 	0	105	504.8072087915362	1007.5998646498724	2	504.8077087402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6407	3032	9437
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9442	26.396	NaN	30857	30	0	3747.5	0.106	+			45584	TYNQKHSLF	9	90	379.8608749686373	1136.5607955061118	3	379.8611755371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TYNQKHSLF_	ENSG00000165175|ENST00000614558|MID1IP1	35.61828744233558	0.47037581924408073	4				NaN	NaN	0	NaN	6408	3032	9437
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9443	26.397	NaN	12476	30	0	5378.4	0.033				-1	 	0	71	434.7796819114632	867.5448108897264	2	434.7799987792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6409	3032	9437
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9444	26.398	NaN	46069	30	0	14569	0.138				-1	 	0	84	424.247294101646	846.480035270092	2	424.2477722167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6410	3032	9437
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9462	26.437	NaN	58652	30	0	16716	0.214				-1	 	0	85	513.7490365314786	1025.4835201297572	2	513.7498168945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6425	3035	9461
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9463	26.44	NaN	60928	30	0	8934.7	0.106				-1	 	0	104	579.7741970712559	1157.5338412093117	2	579.7752075195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6426	3035	9461
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9464	26.442	NaN	42086	30	0	10184	0.106	+			6305	AVSTLGISK	9	86	438.26290357577324	874.5112542183465	2	438.26318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVSTLGISK_	ENSG00000103160|ENST00000219439|HSDL1;nc|ENSG00000103160|Q3SXM5-2|HSDL1	101.45984612302182	0.0377122763612125	4				NaN	NaN	0	NaN	6427	3035	9461
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9465	26.444	NaN	26447	30	0	8655.6	0.106	+			31901	QQHEGGVQEL	10	85	562.7706313744446	1123.5267098156892	2	562.7709350585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QQHEGGVQEL_	ENSG00000090273|ENST00000321265|NUDC;NUDC-MICU1|1|fusion	96.0336014099291	0.09653029772959643	4				NaN	NaN	0	NaN	6428	3035	9461
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9466	26.446	NaN	10551	30	0	877.22	0.106	+			1582	AGISFSVKK	9	78	468.7805900037103	935.5466270742206	2	468.7792053222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AGISFSVKK_	ENSG00000076242|ENST00000231790|MLH1;MLH1|p.N287Tfs*10|1|0.36|ENSG00000076242|chr3:37017571-37017571|A/-|frameshift_variant;MLH1|p.Q197Tfs*7|1|0.48|ENSG00000076242|chr3:37011856-37011857|-/A|frameshift_variant;nc|ENSG00000076242|P40692-3|MLH1	82.7504851949679	0.08565546331141553	4				NaN	NaN	0	NaN	6429	3035	9461
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9467	26.448	NaN	35357	30	0	9135.8	0.035	+			784	AEFAERTVA	9	79	497.25305447097037	992.4915560087408	2	497.2535705566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEFAERTVA_	ENSG00000167460|ENST00000643579|TPM4;ENST00000368528.3_1_3:27674554-27675208:+|nuORF;ENST00000520239.1_1_8:70042334-70042577:+|nuORF;nc|ENSG00000167460|P67936-2|TPM4	115.49404669440601	0.023927554121326553	4				NaN	NaN	0	NaN	6430	3035	9461
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9468	26.448	NaN	23216	30	0	4994.2	0.14	+			39553	STGGAHASLTH	11	85	519.7504257539388	1037.4862985746774	2	519.7516479492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STGGAHASLTH_	ENST00000481804.5_1_16:772680-773505:-|nuORF;ENST00000482878.5_1_16:772872-773550:-|nuORF	56.632244143249146	0.3535169766007185	4				NaN	NaN	0	NaN	6431	3035	9461
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9486	26.488	NaN	317060	30	0	98101	0.147				-1	 	0	68	412.2184444075615	822.422335881923	2	412.2189025878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6446	3038	9485
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9487	26.49	NaN	38173	30	0	5399.1	0.106	+			33005	REFGANDNMGA	11	83	591.2527928634954	1180.4910327937907	2	591.25390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_REFGANDNMGA_	ENSG00000162896|ENST00000356495|PIGR	107.45493779368988	0.045275086874925735	4				NaN	NaN	0	NaN	6447	3038	9485
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9488	26.492	NaN	25418	30	0	6900	0.106	+			1658	AGPSRAVR	8	83	407.2397516506941	812.4649503681882	2	407.2400817871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AGPSRAVR_	ENSG00000102119|ENST00000369842|EMD;ENST00000486738.5_1_X:153608322-153609415:+|nuORF;ENST00000494443.5_1_X:153608322-153608766:+|nuORF;REV__HCN4|p.A21Pfs*211|2|0.22|ENSG00000138622|chr15:73368210-73368210|C/-|frameshift_variant	44.116797842482775	0.6307669463330267	4				NaN	NaN	0	NaN	6448	3038	9485
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9489	26.494	NaN	19557	30	0	2124.6	0.106				-1	 	0	103	504.7765636474948	1007.5385743617896	2	504.77716064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6449	3038	9485
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9490	26.496	NaN	11176	30	0	2857.3	0.106			+	35027	SACYGTPLGL	10	65	346.83600773260787	1037.4861937980236	3	346.83673095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_SAC(Carbamidomethyl (C))YGTPLGL_	REV__ENST00000514442.5_1_5:149772206-149772383:+|nuORF	54.722347961057174	0.4138398245444204	4				NaN	NaN	0	NaN	6450	3038	9485
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9491	26.498	NaN	13337	30	0	1534.8	0.106				-1	 	0	92	551.7792294694467	1101.5439060056933	2	551.7802124023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6451	3038	9485
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9492	26.499	NaN	20390	30	0	4399.6	0.034				-1	 	0	81	459.76585989358585	917.5171668539717	2	459.7662658691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6452	3038	9485
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9510	26.536	NaN	58996	30	0	27440	0.214			+	7438	DFETRIDEL	9	95	379.8520434181917	1136.5343008547752	3	379.85247802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DFETRIDEL_	REV__ENSG00000156510|ENST00000354624|HKDC1;REV__ENSG00000156515|ENST00000359426|HK1;REV__ENST00000494253.1_1_10:71098016-71144300:+|nuORF;REV__nc|ENSG00000156510|Q2TB90-2|HKDC1;REV__nc|ENSG00000156510|Q2TB90-3|HKDC1;REV__nc|ENSG00000156515|P19367-2|HK1;REV__nc|ENSG00000156515|P19367-3|HK1;REV__nc|ENSG00000156515|P19367-4|HK1	56.43379154798735	0.2433427591689151	4				NaN	NaN	0	NaN	6467	3041	9509
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9511	26.54	NaN	15583	30	0	4603.9	0.106				-1	 	0	67	431.25508451523854	860.4956160972771	2	431.2554931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6468	3041	9509
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9512	26.542	NaN	15568	30	0	5778.3	0.106	+			6494	AWFLVNNNC	9	88	540.7519889045877	1079.4894248759754	2	540.7533569335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AWFLVNNNC_	ENST00000572440.1_1_17:44055640-44055811:+|nuORF;ENST00000576518.1_1_17:44055640-44101534:+|nuORF	60.29395666154354	0.21116425950210296	4				NaN	NaN	0	NaN	6469	3041	9509
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9513	26.544	NaN	23542	30	0	1995	0.106			+	51451	YVENDEKQL	9	87	569.2744670289405	1136.534381124681	2	569.2755737304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YVENDEKQL_	REV__VNN2|p.E378D|1|0.25|ENSG00000112303|chr6:132751211-132751211|C/A|missense_variant	63.53385203322761	0.18415635464017938	4				NaN	NaN	0	NaN	6470	3041	9509
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9514	26.546	NaN	15683	30	0	8832.8	0.106				-1	LSKTFCLNT	9	69	361.8548329400004	NaN	0	361.8548278808594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_LSKTFC(Carbamidomethyl (C))LNT_	ENST00000326765.10_1_12:12940582-12940885:+|nuORF	29.170058357718403	0.3302935627494407	4				NaN	NaN	0	NaN	6471	3041	9509
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9515	26.547	NaN	24124	30	0	4825.7	0.036			+	-1	MLVKMASRI	9	91	355.5372579712285	1063.5899445138855	3	355.5377197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_MLVKM(Oxidation (M))ASRI_	REV__ENSG00000137474|ENST00000409709|MYO7A;REV__nc|ENSG00000137474|Q13402-2|MYO7A;REV__nc|ENSG00000137474|Q13402-3|MYO7A;REV__nc|ENSG00000137474|Q13402-4|MYO7A;REV__nc|ENSG00000137474|Q13402-6|MYO7A;REV__nc|ENSG00000137474|Q13402-7|MYO7A;REV__nc|ENSG00000137474|Q13402-8|MYO7A	32.81241826257853	0.4965981579233955	4				NaN	NaN	0	NaN	6472	3041	9509
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9516	26.548	NaN	12506	30	0	1538.1	0.138			+	2106	ALGESSPKL	9	84	451.2526685064869	900.4907840797738	2	452.25579833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ALGESSPKL_	REV__ENSG00000116747|ENST00000400968|RO60;REV__nc|ENSG00000116747|P10155-3|RO60;REV__nc|ENSG00000116747|P10155-4|RO60;REV__nc|ENSG00000116747|P10155-5|RO60;REV__TROVE2|p.K316Rfs*10|1|0.16|ENSG00000116747|chr1:193076641-193076641|A/-|frameshift_variant	47.91560031466742	0.327412564698279	4				NaN	NaN	0	NaN	6473	3041	9509
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9534	26.587	NaN	39218	30	0	14343	0.214			+	9590	ELKQEKELL	9	88	377.219660939899	1128.637153419897	3	377.2201232910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ELKQEKELL_	REV__ENSG00000048052|ENST00000686413|HDAC9;REV__ENST00000461159.6_1_7:18330122-18868840:+|nuORF;REV__HDAC9|p.D553Mfs*46|1|0.4|ENSG00000048052|chr7:18666406-18666412|CAGTGGA/-|frameshift_variant;REV__nc|ENSG00000048052|Q9UKV0-10|HDAC9;REV__nc|ENSG00000048052|Q9UKV0-11|HDAC9;REV__nc|ENSG00000048052|Q9UKV0-2|HDAC9;REV__nc|ENSG00000048052|Q9UKV0-3|HDAC9;REV__nc|ENSG00000048052|Q9UKV0-4|HDAC9;REV__nc|ENSG00000048052|Q9UKV0-5|HDAC9;REV__nc|ENSG00000048052|Q9UKV0-6|HDAC9;REV__nc|ENSG00000048052|Q9UKV0-8|HDAC9;REV__nc|ENSG00000048052|Q9UKV0-9|HDAC9;REV__nc|ENSG00000048052|Q9UKV0|HDAC9	58.78195531508484	0.22376836668196862	4				NaN	NaN	0	NaN	6488	3044	9533
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9535	26.591	NaN	18467	30	0	1661.9	0.106	+			42913	TEIEGTQKL	9	94	509.77361408561114	1017.5326752380223	2	509.7740173339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEIEGTQKL_	ENSG00000120899|ENST00000346049|PTK2B;nc|ENSG00000120899|Q14289-2|PTK2B	104.0567914643314	0.03506238181059741	4				NaN	NaN	0	NaN	6489	3044	9533
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9536	26.593	NaN	11117	30	0	1058.3	0.106	+			11710	FSAESSRSL	9	80	492.24271297618475	982.4708730191695	2	492.242919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FSAESSRSL_	DOCK7|p.F1836Dfs*12|1|0.05|ENSG00000116641|chr1:62477795-62477796|-/TGTC|frameshift_variant;ENSG00000116641|ENST00000635253|DOCK7;nc|ENSG00000116641|Q96N67-2|DOCK7;nc|ENSG00000116641|Q96N67-3|DOCK7;nc|ENSG00000116641|Q96N67-4|DOCK7;nc|ENSG00000116641|Q96N67-5|DOCK7;nc|ENSG00000116641|Q96N67-6|DOCK7	74.1650062923329	0.12277912660386392	4				NaN	NaN	0	NaN	6490	3044	9533
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9537	26.595	NaN	17950	30	0	1924.7	0.106	+			35147	SAIASTKVM	9	81	454.25016232597704	NaN	0	454.2491149902344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SAIASTKVM_	ENSG00000104442|ENST00000276569|ARMC1;nc|ENSG00000104442|Q9NVT9-2|ARMC1	80.45461616416974	0.0698259577396595	4				NaN	NaN	0	NaN	6491	3044	9533
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9538	26.597	NaN	11259	30	0	1173	0.106	+			7276	DANRQISEY	9	78	548.2561635829629	1094.4977742327258	2	548.2572631835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DANRQISEY_	ENSG00000093167|ENST00000336686|LRRFIP2;ENST00000496479.5_1_3:37095344-37107514:-|nuORF;LRRFIP2|p.V671Sfs*2|1|0.12|ENSG00000093167|chr3:37054455-37054456|-/T|frameshift_variant;nc|ENSG00000093167|Q9Y608-2|LRRFIP2;nc|ENSG00000093167|Q9Y608-3|LRRFIP2;nc|ENSG00000093167|Q9Y608-4|LRRFIP2;nc|ENSG00000093167|Q9Y608-5|LRRFIP2	78.26377905018397	0.10505600812668463	4				NaN	NaN	0	NaN	6492	3044	9533
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9539	26.598	NaN	8908.1	30	0	524.5	0.037				-1	 	0	82	571.3370917642013	1140.6596305952025	2	571.3381958007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6493	3044	9533
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9540	26.599	NaN	19925	30	0	2916.5	0.141				-1	 	0	95	565.8234008581496	1129.6322487830992	2	565.8248291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6494	3044	9533
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9558	26.639	NaN	434960	30	0	321910	0.158				-1	 	0	75	322.19311494920123	642.3716769652025	2	322.1935119628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6509	3047	9557
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9559	26.641	NaN	45378	30	0	11376	0.106				-1	 	0	100	433.8901979966868	1298.6487645902605	3	433.8905944824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6510	3047	9557
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9560	26.643	NaN	17103	30	0	2022.1	0.106			+	13769	GQGKLQELE	9	90	501.2659624393829	1000.5173719455659	2	501.2665100097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GQGKLQELE_	REV__ENSG00000026025|ENST00000544301|VIM;REV__ENST00000485947.1_1_10:17271421-17272784:+|nuORF	69.6276240434122	0.14239879520340665	4				NaN	NaN	0	NaN	6511	3047	9557
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9561	26.645	NaN	21388	30	0	2981.2	0.106	+			1234	AEREIVRDI	9	88	367.53983166516775	1099.5976655957033	3	367.54010009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEREIVRDI_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196604|ENST00000409914|POTEF;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2	44.377184641726394	0.36891676396732553	4				NaN	NaN	0	NaN	6512	3047	9557
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9562	26.647	NaN	28527	30	0	9313.9	0.106	+			38892	SSPCHIEM	8	84	480.69839049379664	959.3822280543933	2	480.69903564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_SSPC(Carbamidomethyl (C))HIEM_	ENSG00000265681|ENST00000580261|RPL17;ENST00000414070.1_1_1:109535017-109535455:+|nuORF;ENST00000446498.1_1_1:26781156-26781564:-|nuORF;ENST00000452862.1_1_3:197577273-197577471:-|nuORF;ENST00000498256.1_1_8:29489773-29490157:+|nuORF;nc|ENSG00000265681|P18621-2|RPL17;nc|ENSG00000265681|P18621-3|RPL17	76.84663266511073	0.3498490246073164	4				NaN	NaN	0	NaN	6513	3047	9557
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9563	26.649	NaN	13289	30	0	3469.4	0.106			+	9931	EQVKERLQA	9	75	550.8061320454021	1099.5977111576042	2	550.806884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EQVKERLQA_	REV__ENSG00000177990|ENST00000324472|DPY19L2	69.6276240434122	0.14239879520340665	4				NaN	NaN	0	NaN	6514	3047	9557
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9564	26.65	NaN	9815.5	30	0	1104.8	0.035				-1	 	0	77	517.2865790869305	1032.5586052406609	2	517.287353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6515	3047	9557
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9582	26.687	NaN	32260	30	0	5126.4	0.214	+			991	AEKKIEVVM	9	91	523.7984533601739	1045.5823537871477	2	523.799560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEKKIEVVM_	ENSG00000075539|ENST00000358350|FRYL;ENST00000302806.5_1_4:48621203-48655803:-|nuORF;FRYL|p.K2264Qfs*11|1|0.13|ENSG00000075539|chr4:48531269-48531270|-/G|frameshift_variant;FRYL|p.L330*|1|0.33|ENSG00000075539|chr4:48602066-48602066|A/-|frameshift_variant;FRYL|p.L330Ffs*3|1|0.35|ENSG00000075539|chr4:48602065-48602066|-/A|frameshift_variant;FRYL|p.P2464Efs*13|1|0.04|ENSG00000075539|chr4:48523032-48523033|-/TATACAATTC|frameshift_variant	109.47833844074708	0.029530294723441826	4				NaN	NaN	0	NaN	6530	3050	9581
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9583	26.691	NaN	25941	30	0	3550.3	0.106	+			36537	SFHNIHNTF	9	85	558.7638510495592	1115.5131491659183	2	558.7648315429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SFHNIHNTF_	ENSG00000154473|ENST00000368865|BUB3;ENST00000481952.1_1_10:124921781-124922345:+|nuORF;nc|ENSG00000154473|O43684-2|BUB3	123.20810148215591	0.019257656778428764	4				NaN	NaN	0	NaN	6531	3050	9581
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9584	26.693	NaN	15363	30	0	2397.6	0.106			+	25836	LSDVRNQL	8	94	472.76181300442073	943.5090730756415	2	472.76190185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSDVRNQL_	REV__CENPF|p.S2957Afs*6|1|0.52|ENSG00000117724|chr1:214657310-214657310|A/-|frameshift_variant;REV__CENPF|p.T1974Pfs*11|1|0.22|ENSG00000117724|chr1:214645483-214645483|A/-|frameshift_variant;REV__CENPF|p.T2189Hfs*3|1|0.28|ENSG00000117724|chr1:214646131-214646131|A/-|frameshift_variant;REV__ENSG00000117724|ENST00000366955|CENPF	56.72105179125745	0.5342425954139568	4				NaN	NaN	0	NaN	6532	3050	9581
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9585	26.695	NaN	13572	30	0	1153.7	0.106	+			51573	YYKSTSSAF	9	87	527.2487088263775	1052.482864719555	2	527.2481689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YYKSTSSAF_	ENSG00000197093|ENST00000360039|GAL3ST4;ENST00000423751.2_1_7:99757553-99764836:-|nuORF;GAL3ST4|p.F427Sfs*17|1|0.32|ENSG00000197093|chr7:100160111-100160111|G/-|frameshift_variant;nc|ENSG00000197093|Q96RP7-2|GAL3ST4	124.08010499294276	0.018729767491916592	4				NaN	NaN	0	NaN	6533	3050	9581
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9586	26.696	NaN	7278.5	30	0	720.27	0.106	+			16334	HEKQVYDIAA	10	77	587.2982717694068	1172.5819906056136	2	587.2986450195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HEKQVYDIAA_	ENSG00000018510|ENST00000264167|AGPS	48.601550744091256	0.46988609897316763	4				NaN	NaN	0	NaN	6534	3050	9581
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9587	26.698	NaN	13139	30	0	1744.1	0.037	+			36965	SIMDPNQNVK	10	84	573.2835113603969	1144.5524697875937	2	573.2843017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SIMDPNQNVK_	ENSG00000115963|ENST00000263895|RND3	51.52775601994872	0.4429225830406686	4				NaN	NaN	0	NaN	6535	3050	9581
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9588	26.699	NaN	14616	30	0	1996.2	0.14				-1	 	0	84	449.27334838338936	896.5321438335787	2	449.27349853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6536	3050	9581
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9606	26.738	NaN	69638	30	0	19701	0.214	+			41992	SVYGYGVQK	9	90	500.75800121430643	999.5014494954129	2	500.7584533691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVYGYGVQK_	ENSG00000107164|ENST00000319725|FUBP3;FUBP3|p.P395Lfs*27|2|0.27|ENSG00000107164|chr9:130630689-130630689|C/-|frameshift_variant	131.03138772384656	0.014687601201650916	4				NaN	NaN	0	NaN	6551	3053	9605
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9607	26.741	NaN	41075	30	0	7995.1	0.106	+			24065	LEKAENQVL	9	86	522.2895387493435	1042.5645245654869	2	522.2904052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LEKAENQVL_	ENSG00000185825|ENST00000345046|BCAP31;ENST00000563143.2_1_16:32882346-32883351:+|nuORF;nc|ENSG00000185825|P51572-2|BCAP31	123.20810148215591	0.019257656778428764	4				NaN	NaN	0	NaN	6552	3053	9605
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9608	26.743	NaN	11445	30	0	1641.8	0.106	+			6437	AVYADSGNFK	10	78	536.2585213056136	1070.5024896780271	2	536.2595825195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVYADSGNFK_	ENSG00000145780|ENST00000274457|FEM1C	85.86182877749512	0.1547657473298402	4				NaN	NaN	0	NaN	6553	3053	9605
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9609	26.745	NaN	11749	30	0	2908.8	0.106	+			46469	VETEIQRV	8	81	487.2688274315056	972.5231019298112	2	487.26904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VETEIQRV_	AMOT|p.L850Cfs*59|1|0.13|ENSG00000126016|chrX:112779606-112779606|G/-|frameshift_variant;ENSG00000126016|ENST00000371959|AMOT;nc|ENSG00000126016|Q4VCS5-2|AMOT	69.6276240434122	0.4100012001731381	4				NaN	NaN	0	NaN	6554	3053	9605
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9610	26.747	NaN	8820.2	30	0	659.94	0.106	+			1187	AENPGKYNI	9	89	503.25305420499603	1004.4915554767921	2	503.25341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AENPGKYNI_	ENSG00000153187|ENST00000640218|HNRNPU;nc|ENSG00000153187|Q00839-2|HNRNPU	69.6276240434122	0.14239879520340665	4				NaN	NaN	0	NaN	6555	3053	9605
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9611	26.749	NaN	8798.3	30	0	5251.7	0.036			+	21314	KLTEIPHPK	9	50	354.8816309080739	NaN	0	354.8817138671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KLTEIPHPK_	REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-13|TTN;REV__nc|ENSG00000155657|Q8WZ42-2|TTN;REV__nc|ENSG00000155657|Q8WZ42-4|TTN;REV__nc|ENSG00000155657|Q8WZ42-5|TTN;REV__nc|ENSG00000155657|Q8WZ42-7|TTN;REV__nc|ENSG00000155657|Q8WZ42-8|TTN;REV__nc|ENSG00000155657|Q8WZ42|TTN;REV__TTN|p.A12650Gfs*4|1|0.4|ENSG00000155657|chr2:178633489-178633490|-/T|frameshift_variant;REV__TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;REV__TTN|p.D20259Rfs*40|1|0.44|ENSG00000155657|chr2:178583105-178583106|-/T|frameshift_variant;REV__TTN|p.D21555Ifs*6|1|0.33|ENSG00000155657|chr2:178576659-178576659|G/-|frameshift_variant;REV__TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;REV__TTN|p.D9026Afs*9|1|0.26|ENSG00000155657|chr2:178711205-178711208|CTGT/-|frameshift_variant;REV__TTN|p.E15132Sfs*22|1|0.27|ENSG00000155657|chr2:178612094-178612094|C/-|frameshift_variant;REV__TTN|p.E20392Dfs*6|1|0.04|ENSG00000155657|chr2:178582357-178582358|-/TTTAAAATTA|frameshift_variant;REV__TTN|p.E20392Kfs*4|1|0.02|ENSG00000155657|chr2:178582359-178582360|-/TTTT|frameshift_variant;REV__TTN|p.E9224Gfs*8|1|0.04|ENSG00000155657|chr2:178709697-178709698|-/TCTTATGATATCTTGAC|frameshift_variant;REV__TTN|p.F18705Lfs*8|1|0.37|ENSG00000155657|chr2:178590687-178590687|A/-|frameshift_variant;REV__TTN|p.G12742Vfs*2|1|0.05|ENSG00000155657|chr2:178632983-178632983|C/-|frameshift_variant;REV__TTN|p.G14712Dfs*11|1|0.37|ENSG00000155657|chr2:178614341-178614341|G/-|frameshift_variant;REV__TTN|p.G19920Afs*12|1|0.42|ENSG00000155657|chr2:178584961-178584961|G/-|frameshift_variant;REV__TTN|p.G22029Efs*22|2|0.13|ENSG00000155657|chr2:178575125-178575125|T/-|frameshift_variant;REV__TTN|p.I10495Nfs*4|1|0.37|ENSG00000155657|chr2:178685288-178685289|-/T|frameshift_variant;REV__TTN|p.I24998Nfs*2|1|0.35|ENSG00000155657|chr2:178566216-178566217|-/T|frameshift_variant;REV__TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;REV__TTN|p.I9225Cfs*34|1|0.06|ENSG00000155657|chr2:178709695-178709696|-/ATATCCATGAGCA|frameshift_variant;REV__TTN|p.K10923Rfs*104|2|0.23|ENSG00000155657|chr2:178679362-178679362|T/-|frameshift_variant;REV__TTN|p.K11381Nfs*25|1|0.07|ENSG00000155657|chr2:178671133-178671133|T/-|frameshift_variant;REV__TTN|p.K11556Sfs*15|1|0.39|ENSG00000155657|chr2:178652287-178652287|T/-|frameshift_variant;REV__TTN|p.K14271Qfs*5|1|0.02|ENSG00000155657|chr2:178617351-178617352|-/G|frameshift_variant;REV__TTN|p.K26626Nfs*34|1|0.34|ENSG00000155657|chr2:178561331-178561331|T/-|frameshift_variant;REV__TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;REV__TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;REV__TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant;REV__TTN|p.N13487Tfs*49|1|0.34|ENSG00000155657|chr2:178621335-178621335|T/-|frameshift_variant;REV__TTN|p.N15496Ifs*16|1|0.09|ENSG00000155657|chr2:178610116-178610116|T/-|frameshift_variant;REV__TTN|p.N8964Tfs*27|1|0.11|ENSG00000155657|chr2:178711988-178711988|T/-|frameshift_variant;REV__TTN|p.P16126Rfs*3|1|0.25|ENSG00000155657|chr2:178607301-178607302|TG/-|frameshift_variant;REV__TTN|p.P22810Hfs*10|1|0.03|ENSG00000155657|chr2:178572780-178572781|-/AAAT|frameshift_variant;REV__TTN|p.V10632Yfs*16|1|0.16|ENSG00000155657|chr2:178683254-178683254|T/-|frameshift_variant;REV__TTN|p.V11008Sfs*13|1|0.33|ENSG00000155657|chr2:178678146-178678147|-/T|frameshift_variant;REV__TTN|p.V11345Ffs*4|1|0.4|ENSG00000155657|chr2:178672044-178672044|T/-|frameshift_variant;REV__TTN|p.V13823*|1|0.28|ENSG00000155657|chr2:178620027-178620027|C/-|frameshift_variant;REV__TTN|p.V22573Cfs*4|2|0.31|ENSG00000155657|chr2:178573492-178573492|C/-|frameshift_variant;REV__TTN|p.V27442Cfs*4|1|0.05|ENSG00000155657|chr2:178558107-178558108|-/A|frameshift_variant	30.503639358989545	0.3235605894931338	4				NaN	NaN	0	NaN	6556	3053	9605
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9612	26.749	NaN	6851.2	30	0	672.49	0.138	+			12729	GEKTVAAVM	9	80	453.2414608747843	NaN	0	453.2414855957031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GEKTVAAVM_	EMC1|p.F608Lfs*7|1|0.38|ENSG00000127463|chr1:19231381-19231381|A/-|frameshift_variant;EMC1|p.F974Lfs*4|1|0.22|ENSG00000127463|chr1:19219363-19219363|A/-|frameshift_variant;ENSG00000127463|ENST00000477853|EMC1;ENST00000467423.1_1_1:19565574-19565811:-|nuORF;nc|ENSG00000127463|Q8N766-2|EMC1;nc|ENSG00000127463|Q8N766-3|EMC1;nc|ENSG00000127463|Q8N766-4|EMC1	36.446750945000026	0.29355505452396785	4				NaN	NaN	0	NaN	6557	3053	9605
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9630	26.788	NaN	28694	30	0	3297.2	0.215	+			35949	SEGPKVVSV	9	90	451.2526685064869	900.4907840797738	2	451.2528381347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEGPKVVSV_	ENSG00000143373|ENST00000336715|ZNF687;nc|ENSG00000143373|Q8N1G0-2|ZNF687;ZNF687|p.A639Pfs*74|1|0.27|ENSG00000143373|chr1:151288202-151288202|G/-|frameshift_variant;ZNF687|p.H733Mfs*30|1|0.58|ENSG00000143373|chr1:151288603-151288603|C/-|frameshift_variant;ZNF687|p.P960Lfs*23|1|0.3|ENSG00000143373|chr1:151289915-151289915|G/-|frameshift_variant;ZNF687|p.R871Gfs*29|1|0.1|ENSG00000143373|chr1:151289512-151289512|A/-|frameshift_variant;ZNF687|p.R939Vfs*10|1|0.08|ENSG00000143373|chr1:151289852-151289852|C/-|frameshift_variant	82.7504851949679	0.08565546331141553	4				NaN	NaN	0	NaN	6572	3056	9629
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9631	26.792	NaN	10935	30	0	1850.1	0.106	+			13952	GSAFSTSISK	10	70	492.7525840236791	983.4906151141582	2	492.75299072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSAFSTSISK_	ENSG00000179115|ENST00000314606|FARSA;ENST00000592662.5_1_19:13039347-13044510:-|nuORF	94.4091291819064	0.10583072883246657	4				NaN	NaN	0	NaN	6573	3056	9629
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9632	26.794	NaN	14570	30	0	1551	0.106	+			8113	DYMKTTSNF	9	78	561.7412046808199	1121.4678564284397	2	561.742431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_DYM(Oxidation (M))KTTSNF_	ENSG00000165525|ENST00000298310|NEMF;nc|ENSG00000165525|O60524-3|NEMF;nc|ENSG00000165525|O60524-4|NEMF;NEMF|p.K641Rfs*9|1|0.15|ENSG00000165525|chr14:49802721-49802721|T/-|frameshift_variant;NEMF|p.M879*|1|0.12|ENSG00000165525|chr14:49789558-49789558|T/-|frameshift_variant;NEMF|p.M879Nfs*10|1|0.13|ENSG00000165525|chr14:49789557-49789558|-/T|frameshift_variant	129.42129120953632	0.01549634589885217	4				NaN	NaN	0	NaN	6574	3056	9629
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9633	26.795	NaN	70637	30	0	24617	0.106				-1	 	0	109	377.19242644457904	1128.555449933937	3	377.192626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6575	3056	9629
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9634	26.797	NaN	69078	30	0	7748.4	0.106	+			50510	YANSKAVTL	9	99	483.76581077601315	965.5170686188263	2	483.7663879394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YANSKAVTL_	ENSG00000164091|ENST00000296490|WDR82;ENST00000487402.1_1_3:52291508-52301068:-|nuORF	143.37361013837676	0.008897369944672323	4				NaN	NaN	0	NaN	6576	3056	9629
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9635	26.799	NaN	27678	30	0	4874.1	0.037			+	47304	VNQVHEEFK	9	82	565.2847372715484	1128.5549216098966	2	565.2855834960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VNQVHEEFK_	REV__ENST00000446006.1_1_7:64324607-64324745:+|nuORF	53.351449002276354	0.2690372970092375	4				NaN	NaN	0	NaN	6577	3056	9629
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9636	26.8	NaN	4831.3	30	0	632.65	0.14	+			15471	GVAELGVTK	9	69	437.25521030796375	872.4958676827275	2	437.25543212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GVAELGVTK_	ENSG00000105058|ENST00000263384|FAM32A;ENST00000589852.5_1_19:16296199-16296328:+|nuORF;nc|ENSG00000105058|Q9Y421-2|FAM32A	82.7504851949679	0.08565546331141553	4				NaN	NaN	0	NaN	6578	3056	9629
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9654	26.838	NaN	44400	30	0	25537	0.214	+			30846	QEGAKMAVRL	10	84	551.804795882726	1101.595038832252	2	551.8058471679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QEGAKMAVRL_	CTNNB1|p.L301Hfs*16|1|0.05|ENSG00000168036|chr3:41225827-41225831|TTCAA/-|frameshift_variant;ENSG00000168036|ENST00000349496|CTNNB1;ENSG00000173801|ENST00000393931|JUP	150.81021883065287	0.008351675499118036	4				NaN	NaN	0	NaN	6593	3059	9653
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9655	26.842	NaN	63213	30	0	20840	0.106	+			15139	GTSEFITGK	9	82	470.2422583569895	938.469963780779	2	470.2426452636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTSEFITGK_	ENSG00000110002|ENST00000456829|VWA5A;VWA5A|p.D571Mfs*3|1|0.56|ENSG00000110002|chr11:124137094-124137094|A/-|frameshift_variant	129.42129120953632	0.01549634589885217	4				NaN	NaN	0	NaN	6594	3059	9653
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9656	26.844	NaN	15617	30	0	1946.9	0.106				-1	 	0	85	493.7661907443991	985.5178285555983	2	493.7666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6595	3059	9653
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9657	26.846	NaN	13923	30	0	2070.1	0.106	+			38176	SQCEFSMGK	9	90	537.2223814346768	1072.4302099361535	2	537.2235717773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_SQC(Carbamidomethyl (C))EFSMGK_	ENSG00000163634|ENST00000295899|THOC7;ENST00000487570.1_1_3:63824036-63825384:-|nuORF;THOC7|p.M198Ifs*5|1|0.05|ENSG00000163634|chr3:63834152-63834153|CC/-|frameshift_variant;THOC7|p.N115Kfs*6|1|0.12|ENSG00000163634|chr3:63837983-63837984|-/T|frameshift_variant;THOC7|p.Q105Afs*16|1|0.29|ENSG00000163634|chr3:63838016-63838017|-/T|frameshift_variant	84.81729255234993	0.07947707105691067	4				NaN	NaN	0	NaN	6596	3059	9653
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9658	26.848	NaN	12752	30	0	993.57	0.106	+			12874	GEQYDQAKL	9	78	526.2573185101162	NaN	0	526.2567749023438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GEQYDQAKL_	CNOT1|p.Q904Sfs*9|4|0.29|ENSG00000125107|chr16:58555436-58555436|A/-|frameshift_variant;ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1;nc|ENSG00000125107|A5YKK6-4|CNOT1	91.26522074875469	0.03904588892501484	4				NaN	NaN	0	NaN	6597	3059	9653
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9659	26.849	NaN	9960	30	0	785.52	0.034	+			41346	SVLVSAGNVK	10	78	487.2874606025093	NaN	0	487.2873229980469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVLVSAGNVK_	DYNC1H1|p.F2635Lfs*67|1|0.16|ENSG00000197102|chr14:102017141-102017141|T/-|frameshift_variant;DYNC1H1|p.K3112Hfs*3|1|0.31|ENSG00000197102|chr14:102027998-102027999|-/TCACAAG|frameshift_variant;DYNC1H1|p.W4201Gfs*43|1|0.42|ENSG00000197102|chr14:102043958-102043958|G/-|frameshift_variant;ENSG00000197102|ENST00000360184|DYNC1H1	74.1650062923329	0.1281759236810302	4				NaN	NaN	0	NaN	6598	3059	9653
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9660	26.85	NaN	12456	30	0	2351.5	0.144	+			33593	RLMSLPIAKK	10	81	386.24579337684963	1155.7155507307489	3	386.2458801269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RLMSLPIAKK_	ENSG00000198663|ENST00000480824|C6orf89;nc|nan|Q6UWU4-2|C6orf89	48.18798116849167	0.47369693546262365	4				NaN	NaN	0	NaN	6599	3059	9653
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9678	26.889	NaN	202240	30	0	32415	0.164				-1	 	0	94	560.7648978125009	1119.5152426918016	2	560.7661743164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6614	3062	9677
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9679	26.892	NaN	66047	30	0	24369	0.106			+	-1	LSTIVYSMSI	10	95	377.1990637005525	1128.5753617018574	3	377.1993408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LSTIVYSM(Oxidation (M))SI_	REV__ENSG00000125522|ENST00000684052|NPBWR2	37.50817390946774	0.5721060100277453	4				NaN	NaN	0	NaN	6615	3062	9677
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9680	26.894	NaN	21967	30	0	6764.5	0.106			+	17908	IGGNPTYIP	9	78	466.2494975271346	930.4844421210693	2	466.2494201660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IGGNPTYIP_	REV__ENSG00000185070|ENST00000330753|FLRT2	68.78682469695295	0.14603441672067394	4				NaN	NaN	0	NaN	6616	3062	9677
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9681	26.896	NaN	68718	30	0	34262	0.106				-1	 	0	85	431.2550857652436	860.4956185972873	2	431.2554626464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6617	3062	9677
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9682	26.898	NaN	21199	30	0	4178.8	0.106	+			17419	IASSRSVDL	9	92	474.26046344637047	946.506373959541	2	474.2605895996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IASSRSVDL_	ENSG00000135052|ENST00000388712|GOLM1;GOLM1|p.K180Nfs*4|1|0.16|ENSG00000135052|chr9:86040796-86040797|-/A|frameshift_variant;GOLM1|p.N182Efs*2|1|0.23|ENSG00000135052|chr9:86040796-86040797|-/T|frameshift_variant;nc|ENSG00000135052|Q8NBJ4-2|GOLM1	78.26377905018397	0.10505600812668463	4				NaN	NaN	0	NaN	6618	3062	9677
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9683	26.899	NaN	65421	30	0	14190	0.106	+			42797	TEALPENRLS	10	106	565.2948142863254	1128.5750756394507	2	565.2953491210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TEALPENRLS_	ENSG00000184445|ENST00000333479|KNTC1;KNTC1|p.K1646Nfs*2|2|0.35|ENSG00000184445|chr12:122603073-122603073|A/-|frameshift_variant;KNTC1|p.K1646Tfs*12|1|0.13|ENSG00000184445|chr12:122603073-122603074|AA/-|frameshift_variant;KNTC1|p.L1647Tfs*12|1|0.3|ENSG00000184445|chr12:122603072-122603073|-/A|frameshift_variant;KNTC1|p.L554Yfs*3|1|0.11|ENSG00000184445|chr12:122568311-122568311|T/-|frameshift_variant;KNTC1|p.T659Nfs*33|1|0.07|ENSG00000184445|chr12:122571076-122571077|-/A|frameshift_variant	82.24051045832904	0.17731618517892733	4				NaN	NaN	0	NaN	6619	3062	9677
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9684	26.901	NaN	35730	30	0	4240.7	0.036	+			34751	RYASINTHL	9	108	537.7871491139567	1073.5597452947134	2	537.7883911132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RYASINTHL_	CSNK1D|p.R358Gfs*12|1|0.25|ENSG00000141551|chr17:82249000-82249000|G/-|frameshift_variant;CSNK1D|p.T344Hfs*26|1|0.26|ENSG00000141551|chr17:82249459-82249459|G/-|frameshift_variant;ENSG00000141551|ENST00000314028|CSNK1D;ENSG00000213923|ENST00000396832|CSNK1E;ENST00000578904.1_1_17:80208040-80213403:-|nuORF;ENST00000581241.5_1_17:80206597-80211051:-|nuORF;ENST00000584377.5_1_17:80203885-80211156:-|nuORF;nc|ENSG00000141551|P48730-2|CSNK1D	56.43379154798735	0.2433427591689151	4				NaN	NaN	0	NaN	6620	3062	9677
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9702	26.938	NaN	15203	30	0	5414.5	0.214	+			34809	RYLEKPMEI	9	79	597.812211393878	1193.6098698545559	2	597.8132934570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_RYLEKPM(Oxidation (M))EI_	ENSG00000168610|ENST00000264657|STAT3;nc|ENSG00000168610|P40763-2|STAT3;nc|ENSG00000168610|P40763-3|STAT3;STAT3|p.R729Afs*3|2|0.33|ENSG00000168610|chr17:42316861-42316861|G/-|frameshift_variant	53.08895987439943	0.27122541748218487	4				NaN	NaN	0	NaN	6635	3065	9701
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9703	26.941	NaN	35441	30	0	11346	0.106	+			29090	NTMNQFVNK	9	89	548.2654140549399	1094.5162751766798	2	548.2666625976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NTMNQFVNK_	ENSG00000168090|ENST00000303904|COPS6	163.1509380574825	0.003936019289634439	4				NaN	NaN	0	NaN	6636	3065	9701
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9704	26.943	NaN	6532.2	30	0	433.76	0.106				-1	 	0	73	576.3149634814122	1150.6153740296243	2	576.3160400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6637	3065	9701
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9705	26.945	NaN	8388.4	30	0	1140.1	0.106	+			40232	STSFGVPNAN	10	83	497.2349032566969	992.4552535801938	2	497.2354431152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STSFGVPNAN_	ENSG00000183963|ENST00000333137|SMTN;ENST00000460658.5_1_22:31492537-31495228:+|nuORF;nc|ENSG00000183963|P53814-2|SMTN;nc|ENSG00000183963|P53814-6|SMTN;nc|ENSG00000183963|P53814|SMTN	58.22992032128504	0.38193887838457763	4				NaN	NaN	0	NaN	6638	3065	9701
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9706	26.947	NaN	5930.4	30	0	2245.6	0.106			+	326	AAPSATAACM	10	65	455.1930231676792	908.3714934021584	2	455.1936950683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_AAPSATAACM(Oxidation (M))_	REV__ENSG00000005810|ENST00000544440|MYCBP2;REV__MYCBP2|p.C1064Ifs*31|1|0.09|ENSG00000005810|chr13:77211267-77211279|TTATCAGAAGGCA/-|frameshift_variant;REV__MYCBP2|p.G54Afs*15|1|0.3|ENSG00000005810|chr13:77326501-77326501|C/-|frameshift_variant;REV__MYCBP2|p.G651Efs*24|1|0.04|ENSG00000005810|chr13:77257781-77257782|-/ATTAGTTTTT|frameshift_variant;REV__MYCBP2|p.K375Sfs*4|1|0.3|ENSG00000005810|chr13:77270014-77270014|T/-|frameshift_variant;REV__MYCBP2|p.N1867Tfs*9|1|0.15|ENSG00000005810|chr13:77171572-77171572|T/-|frameshift_variant;REV__MYCBP2|p.N3049*|1|0.11|ENSG00000005810|chr13:77097894-77097895|TT/-|frameshift_variant;REV__MYCBP2|p.P4047Qfs*26|2|0.35|ENSG00000005810|chr13:77067782-77067782|G/-|frameshift_variant;REV__MYCBP2|p.T1507Ffs*24|1|0.04|ENSG00000005810|chr13:77185189-77185190|-/TTGTAAA|frameshift_variant;REV__MYCBP2|p.T4311Pfs*37|1|0.14|ENSG00000005810|chr13:77059619-77059619|G/-|frameshift_variant;REV__MYCBP2|p.V3749*|1|0.12|ENSG00000005810|chr13:77081486-77081486|C/-|frameshift_variant;REV__nc|ENSG00000005810|O75592-2|MYCBP2	42.396135135203025	0.5270658956260207	4				NaN	NaN	0	NaN	6639	3065	9701
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9707	26.949	NaN	7065.4	30	0	1302.3	0.04	+			8364	EALNKEYLSIK	11	77	436.57773999018787	1306.7113905707636	3	436.5780944824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EALNKEYLSIK_	tr|U7SIN4|U7SIN4_FUSNUThiazolebiosynthesisproteinThiHOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02117PE=4SV=1	36.527901853580055	0.6054519527965578	4				NaN	NaN	0	NaN	6640	3065	9701
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9708	26.949	NaN	12703	30	0	2110.7	0.144			+	-1	LSINALSCMAC	11	67	419.1866489540406	1254.538117462322	3	419.1875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C),Oxidation (M)	_LSINALSC(Carbamidomethyl (C))M(Oxidation (M))AC(Carbamidomethyl (C))_	REV__ENSG00000078725|ENST00000265922|BRINP1;REV__nc|ENSG00000078725|O60477-3|BRINP1	42.33807565288922	0.5259510355945483	4				NaN	NaN	0	NaN	6641	3065	9701
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9726	26.988	NaN	265520	30	0	56928	0.143				-1	 	0	66	322.19311494920123	642.3716769652025	2	322.193603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6656	3068	9725
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9727	26.991	NaN	50735	30	0	26145	0.106				-1	 	0	79	519.7761508556506	1037.537748778101	2	519.7772827148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6657	3068	9725
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9728	26.993	NaN	11140	30	0	615.69	0.106	+			672	AEAITSQKL	9	73	480.7706174607031	959.5266819882062	2	480.7713623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEAITSQKL_	ENSG00000203697|ENST00000366872|CAPN8	120.8684288430529	0.02067403653475984	4				NaN	NaN	0	NaN	6658	3068	9725
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9729	26.994	NaN	33991	30	0	5044.1	0.106	+			13823	GQQRQRGGAA	10	88	514.771348377953	1027.528143822706	2	514.7725219726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GQQRQRGGAA_	ENST00000372469.5_1_9:132427956-132481510:+|nuORF	49.44154591367651	0.46214596422418036	4				NaN	NaN	0	NaN	6659	3068	9725
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9730	26.996	NaN	7353.5	30	0	1037.4	0.106	+			35586	SAYLGSEQYK	10	76	573.2762762963848	1144.5379996595696	2	573.2781372070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SAYLGSEQYK_	ENSG00000171202|ENST00000304511|TMEM126A;nc|ENSG00000171202|Q9H061-2|TMEM126A	99.01295224348159	0.08062808246117298	4				NaN	NaN	0	NaN	6660	3068	9725
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9731	26.998	NaN	16263	30	0	2026.5	0.106	+			49289	VVQGDPREL	9	76	506.7742179720466	1011.5338830108932	2	506.77459716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VVQGDPREL_	ENSG00000137642|ENST00000260197|SORL1;ENST00000532451.1_1_11:121323091-121416136:+|nuORF;SORL1|p.F2103Lfs*44|1|0.22|ENSG00000137642|chr11:121625218-121625218|T/-|frameshift_variant;SORL1|p.M1581Cfs*34|2|0.28|ENSG00000137642|chr11:121605196-121605196|A/-|frameshift_variant	51.19269402634007	0.2889735674168909	4				NaN	NaN	0	NaN	6661	3068	9725
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9732	27	NaN	4882.7	30	0	500.07	0.035	+			42593	TATAGMNMY	9	72	496.1960017161152	990.3774504990304	2	496.1965637207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Oxidation (M)	_TATAGM(Oxidation (M))NM(Oxidation (M))Y_	BIRC6|p.A1071Lfs*23|1|0.39|ENSG00000115760|chr2:32431053-32431053|G/-|frameshift_variant;ENST00000421745.6_1_2:32656112-32658743:+|nuORF	51.33545320467046	0.2872990594074956	4				NaN	NaN	0	NaN	6662	3068	9725
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9748	27.033	NaN	58559	30	0	24227	0.214	+			14976	GTMTGMLYK	9	89	509.2397912474969	1016.4650295617938	2	509.24053955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_GTMTGM(Oxidation (M))LYK_	ENSG00000178440|ENST00000651763|TIMM23B-AGAP6;ENSG00000204152|ENST00000651259|TIMM23B;ENSG00000265354|ENST00000580018|TIMM23;nc|ENSG00000204152|Q5SRD1-2|TIMM23B	118.74307786436346	0.02196067127630568	4				NaN	NaN	0	NaN	6675	3071	9747
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9749	27.037	NaN	19426	30	0	2531.2	0.106				-1	 	0	87	578.3233598786892	1154.6321668241783	2	578.32421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6676	3071	9747
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9750	27.039	NaN	5567.4	30	0	517.26	0.106	+			35878	SEEGGHVVL	9	61	463.7318587094893	925.4491644857786	2	463.73211669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEEGGHVVL_	ENSG00000053747|ENST00000313654|LAMA3;nc|ENSG00000053747|Q16787-1|LAMA3;nc|ENSG00000053747|Q16787-3|LAMA3;nc|ENSG00000053747|Q16787-4|LAMA3	76.84663266511073	0.11118375776443899	4				NaN	NaN	0	NaN	6677	3071	9747
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9751	27.04	NaN	14966	30	0	1838.7	0.106	+			44445	TSMSKMFVK	9	90	529.7715501214994	1057.5285473097988	2	529.7723999023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TSMSKMFVK_	ATP2A2|p.I1027Cfs*4|1|0.37|ENSG00000174437|chr12:110346394-110346395|-/TGTGCTGCTCATAATGCCCCTGG|frameshift_variant;ENSG00000174437|ENST00000539276|ATP2A2;nc|ENSG00000174437|P16615-2|ATP2A2;nc|ENSG00000174437|P16615-3|ATP2A2;nc|ENSG00000174437|P16615-4|ATP2A2;nc|ENSG00000174437|P16615-5|ATP2A2	82.7504851949679	0.08565546331141553	4				NaN	NaN	0	NaN	6678	3071	9747
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9752	27.042	NaN	14422	30	0	2566.8	0.106			+	8678	EDVSGNRPQ	9	96	501.23704965744787	1000.4595463816958	2	501.23773193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EDVSGNRPQ_	REV__ENSG00000157106|ENST00000446231|SMG1;REV__nc|ENSG00000157106|Q96Q15-2|SMG1;REV__nc|ENSG00000157106|Q96Q15-3|SMG1;REV__nc|ENSG00000157106|Q96Q15-4|SMG1;REV__SMG1|p.A3214Rfs*29|1|0.06|ENSG00000157106|chr16:18828132-18828133|-/ATTTTCT|frameshift_variant	67.49366992349736	0.1516260258713357	4				NaN	NaN	0	NaN	6679	3071	9747
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9753	27.044	NaN	6349.3	30	0	786.87	0.106			+	26597	LTVTGGPAV	9	68	407.73661229828474	813.4586716633695	2	407.7369079589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LTVTGGPAV_	REV__AGER|p.S283Afs*4|1|0.17|ENSG00000204305|chr6:32182365-32182365|G/-|frameshift_variant;REV__ENSG00000204305|ENST00000375076|AGER;REV__nc|ENSG00000204305|Q15109-10|AGER;REV__nc|ENSG00000204305|Q15109-2|AGER;REV__nc|ENSG00000204305|Q15109-3|AGER;REV__nc|ENSG00000204305|Q15109-4|AGER;REV__nc|ENSG00000204305|Q15109-6|AGER;REV__nc|ENSG00000204305|Q15109-7|AGER;REV__nc|ENSG00000204305|Q15109-8|AGER;REV__nc|ENSG00000204305|Q15109-9|AGER	65.80317337860623	0.1652391959156183	4				NaN	NaN	0	NaN	6680	3071	9747
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9754	27.046	NaN	4875.3	30	0	571.94	0.033			+	-1	IMGIAPII	8	63	422.25497241592876	842.4953918986575	2	422.2556457519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_IM(Oxidation (M))GIAPII_	REV__ENSG00000162692|ENST00000294728|VCAM1;REV__ENST00000603679.1_1_1:101203653-101203836:+|nuORF;REV__nc|ENSG00000162692|P19320-2|VCAM1;REV__nc|ENSG00000162692|P19320-3|VCAM1	54.89457262308372	0.5523244765420926	4				NaN	NaN	0	NaN	6681	3071	9747
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9772	27.082	NaN	11744	30	0	3379	0.214			+	49358	VVSRVSRLSF	10	64	383.8955452787523	1148.664806436457	3	383.8960266113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVSRVSRLSF_	REV__ENSG00000168569|ENST00000307366|TMEM223	33.921630207806714	0.6028135429846169	4				NaN	NaN	0	NaN	6696	3074	9771
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9773	27.086	NaN	17780	30	0	3788.3	0.106	+			28447	NFDFSIFNK	9	92	377.8535870490066	1130.5389317472197	3	377.853759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NFDFSIFNK_	ENSG00000100350|ENST00000397224|FOXRED2;nc|ENSG00000100350|Q8IWF2-2|FOXRED2	52.936696900407355	0.27249468807391813	4				NaN	NaN	0	NaN	6697	3074	9771
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9774	27.088	NaN	17723	30	0	7686.8	0.106	+			31366	QKDLARVEK	9	88	362.88043729205356	NaN	0	362.8803405761719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QKDLARVEK_	ENSG00000127124|ENST00000372583|HIVEP3;ENST00000460604.1_1_1:41984149-42045569:-|nuORF;HIVEP3|p.G2228Vfs*5|1|0.27|ENSG00000127124|chr1:41510989-41510989|C/-|frameshift_variant;nc|ENSG00000127124|Q5T1R4-2|HIVEP3	33.921630207806714	0.3063038642147651	4				NaN	NaN	0	NaN	6698	3074	9771
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9775	27.09	NaN	19066	30	0	1322.8	0.106	+			4973	ATQVAVSVPK	10	86	500.29592363603876	NaN	0	500.2951965332031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATQVAVSVPK_	EIF4G1|p.P1229Qfs*2|1|0.18|ENSG00000114867|chr3:184327606-184327606|C/-|frameshift_variant;ENSG00000114867|ENST00000346169|EIF4G1;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1	110.54063921016906	0.013628804824988862	4				NaN	NaN	0	NaN	6699	3074	9771
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9776	27.091	NaN	25191	30	0	8884.5	0.106				-1	 	0	75	464.77615852359327	927.5377641139866	2	464.7765808105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6700	3074	9771
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9777	27.093	NaN	6404.7	30	0	414.61	0.036	+			27705	MPYSHPSSY	9	80	534.7255982907001	1067.4366436482	2	534.7267456054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MPYSHPSSY_	ENSG00000164190|ENST00000282516|NIPBL;ENST00000504430.5_1_5:36961623-36995905:+|nuORF;nc|ENSG00000164190|Q6KC79-2|NIPBL;nc|ENSG00000164190|Q6KC79-3|NIPBL;NIPBL|p.F1423Lfs*15|1|0.43|ENSG00000164190|chr5:37008032-37008032|T/-|frameshift_variant;NIPBL|p.I2776Lfs*3|1|0.17|ENSG00000164190|chr5:37064797-37064797|A/-|frameshift_variant;NIPBL|p.K603Sfs*11|2|0.29|ENSG00000164190|chr5:36984981-36984981|A/-|frameshift_variant;NIPBL|p.L2220Ffs*3|1|0.21|ENSG00000164190|chr5:37048567-37048568|-/T|frameshift_variant;NIPBL|p.R505Efs*35|1|0.19|ENSG00000164190|chr5:36984687-36984687|A/-|frameshift_variant	128.8611167810002	0.015835461597062447	4				NaN	NaN	0	NaN	6701	3074	9771
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9778	27.094	NaN	6407.9	30	0	1076.3	0.144			+	12959	GESVVKVSVVA	11	72	358.543623858539	1072.609042175817	3	358.544677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GESVVKVSVVA_	REV__ENST00000490764.5_1_2:234327938-234366271:+|nuORF	53.59686742100583	0.38061189074210516	4				NaN	NaN	0	NaN	6702	3074	9771
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9794	27.129	NaN	117550	30	0	58407	0.21	+			8772	EEIAKVEKL	9	100	529.8082917209799	1057.6020305087598	2	529.8085327148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EEIAKVEKL_	ENSG00000170348|ENST00000303575|TMED10;ENST00000555036.1_1_14:75602424-75614456:-|nuORF;ENST00000556969.5_1_14:75601590-75614465:-|nuORF	200.56263349563793	3.093786480258617E-05	4				NaN	NaN	0	NaN	6715	3077	9793
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9795	27.132	NaN	51720	30	0	4558.3	0.106	+			36577	SFSTVHEKF	9	103	541.2687502272986	1080.522947521397	2	541.269287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SFSTVHEKF_	ENSG00000134987|ENST00000513710|WDR36;ENST00000505303.5_1_5:110428043-110447004:+|nuORF;nc|ENSG00000134987|Q8NI36|WDR36	120.27252224102466	0.02103478360410217	4				NaN	NaN	0	NaN	6716	3077	9793
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9796	27.134	NaN	20966	30	0	3123.6	0.106	+			41911	SVVGNFQEK	9	87	504.2608032643165	NaN	0	504.26129150390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVVGNFQEK_	ENSG00000180061|ENST00000326652|TMEM150B	61.76455937419982	0.141793055474112	4				NaN	NaN	0	NaN	6717	3077	9793
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9797	27.136	NaN	11934	30	0	4406.2	0.106				-1	 	0	72	477.7712200767673	953.5278872203346	2	477.77154541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6718	3077	9793
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9798	27.138	NaN	6590.3	30	0	845.63	0.106	+			45083	TVIDSQTHY	9	82	532.2565260844885	1062.498499235777	2	532.2566528320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TVIDSQTHY_	ENSG00000166557|ENST00000299705|TMED3	82.7504851949679	0.08565546331141553	4				NaN	NaN	0	NaN	6719	3077	9793
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9799	27.14	NaN	9798.2	30	0	1311	0.037	+			18355	IQNDRQLQY	9	81	589.3001133333206	1176.5856737334411	2	589.3014526367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IQNDRQLQY_	ENSG00000100109|ENST00000407690|TFIP11;TFIP11|p.N538Tfs*75|1|0.26|ENSG00000100109|chr22:26496309-26496309|T/-|frameshift_variant	69.6276240434122	0.14239879520340665	4				NaN	NaN	0	NaN	6720	3077	9793
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9800	27.14	NaN	39098	30	0	16555	0.145				-1	STLQVCNWF	9	89	385.51566405039284	1153.5251627513785	3	385.51580810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_STLQVC(Carbamidomethyl (C))NWF_	ENSG00000177426|ENST00000343820|TGIF1;nc|ENSG00000177426|Q15583-3|TGIF1;nc|ENSG00000177426|Q15583-4|TGIF1;nc|ENSG00000177426|Q15583|TGIF1;TGIF1|p.G352Lfs*32|1|0.87|ENSG00000177426|chr18:3457784-3457785|-/TC|frameshift_variant;TGIF1|p.N260Rfs*10|1|0.36|ENSG00000177426|chr18:3457501-3457502|-/GGGCATCAAAA|frameshift_variant;TGIF1|p.S291Vfs*61|1|0.52|ENSG00000177426|chr18:3457598-3457599|-/CCGT|frameshift_variant	49.44154591367651	0.3095138337212152	4				NaN	NaN	0	NaN	6721	3077	9793
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9818	27.18	NaN	54976	30	0	11545	0.214	+			14313	GSYNKVFLAK	10	92	563.8158503936604	1125.6171478541207	2	563.816650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSYNKVFLAK_	ENSG00000099341|ENST00000215071|PSMD8;ENST00000592001.5_1_19:38865430-38871817:+|nuORF	162.63603312974413	0.006026810256601855	4				NaN	NaN	0	NaN	6736	3080	9817
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9819	27.183	NaN	75145	30	0	11140	0.106	+			3440	ASQLVGIEK	9	96	472.7736022944308	943.5326516556617	2	472.77386474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASQLVGIEK_	ENSG00000077152|ENST00000646651|UBE2T	171.33049012695201	0.0025398094975457087	4				NaN	NaN	0	NaN	6737	3080	9817
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9820	27.185	NaN	80368	30	0	18110	0.106	+			14314	GSYNKVFLAK	10	97	376.21327656771535	NaN	0	376.2132568359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GSYNKVFLAK_	ENSG00000099341|ENST00000215071|PSMD8;ENST00000592001.5_1_19:38865430-38871817:+|nuORF	109.43880257439609	0.012705359521079733	4				NaN	NaN	0	NaN	6738	3080	9817
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9821	27.187	NaN	25934	30	0	5437.8	0.106	+			4547	ATLDIDGVRK	10	97	363.2084520551298	NaN	0	363.20831298828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATLDIDGVRK_	ENSG00000171723|ENST00000478722|GPHN;MPP5-GPHN|1|fusion;MPP5-GPHN|2|fusion;MPP5-GPHN|7|fusion;MPP5-GPHN|8|fusion;nc|ENSG00000171723|Q9NQX3|GPHN	51.52775601994872	0.29594378441454594	4				NaN	NaN	0	NaN	6739	3080	9817
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9822	27.189	NaN	26625	30	0	9047.7	0.106	+			14153	GSMTVVTVK	9	77	461.256401577041	920.498250220882	2	461.2568664550781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GSMTVVTVK_	ENSG00000001461|ENST00000374399|NIPAL3;nc|ENSG00000001461|Q6P499-2|NIPAL3	129.42129120953632	0.01549634589885217	4				NaN	NaN	0	NaN	6740	3080	9817
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9823	27.191	NaN	7237	30	0	1694.2	0.038	+			32921	REAEALTQRL	10	77	593.8298689758813	1185.6451850185624	2	593.8309326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_REAEALTQRL_	ENSG00000105357|ENST00000642316|MYH14;MYH14|p.L1950Sfs*14|1|0.34|ENSG00000105357|chr19:50309646-50309646|C/-|frameshift_variant;nc|ENSG00000105357|Q7Z406-5|MYH14;nc|ENSG00000105357|Q7Z406-6|MYH14;nc|ENSG00000105357|Q7Z406|MYH14	56.632244143249146	0.3964695498866976	4				NaN	NaN	0	NaN	6741	3080	9817
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9824	27.191	NaN	48266	30	0	21563	0.145			+	29911	PLQDIHIGQV	10	100	373.8768615109956	1118.6087551331868	3	373.8768310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PLQDIHIGQV_	REV__ENSG00000174842|ENST00000370360|GLMN;REV__nc|ENSG00000174842|Q92990-2|GLMN	32.81241826257853	0.6118718159329168	4				NaN	NaN	0	NaN	6742	3080	9817
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9842	27.231	NaN	28820	30	0	3585.2	0.214	+			23445	LADPENRQL	9	85	528.2771925599073	1054.5398321866146	2	528.2780151367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LADPENRQL_	ENSG00000172164|ENST00000517992|SNTB1;ENST00000519177.5_1_8:121583594-121823792:-|nuORF;nc|ENSG00000172164|Q13884-2|SNTB1	101.25262130126117	0.03792372629710479	4				NaN	NaN	0	NaN	6757	3083	9841
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9843	27.234	NaN	18143	30	0	5370.1	0.106	+			29768	PHYTTFDG	8	76	469.20562546976674	936.3966980063335	2	469.2060852050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PHYTTFDG_	ENSG00000275395|ENST00000616721|FCGBP;ENSG00000275395|ENST00000616721|FCGBP;ENSG00000275395|ENST00000616721|FCGBP;FCGBP-ACSS2|1|fusion;FCGBP-ACSS2|1|fusion;FCGBP-ACSS2|1|fusion;FCGBP-ACSS2|1|fusion;nc|ENSG00000275395|Q9Y6R7|FCGBP;nc|ENSG00000275395|Q9Y6R7|FCGBP;nc|ENSG00000275395|Q9Y6R7|FCGBP;nc|ENSG00000275395|Q9Y6R7|FCGBP	123.9887779854562	0.22885264854939885	4				NaN	NaN	0	NaN	6758	3083	9841
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9844	27.236	NaN	20266	30	0	10674	0.106	+			5495	AVADKVHLMYK	11	72	425.56842846216364	1273.683455986691	3	425.56903076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVADKVHLMYK_	ENSG00000121060|ENST00000316881|TRIM25;ENST00000572021.5_1_17:54969063-54989474:-|nuORF	63.42647028704847	0.292869158926425	4				NaN	NaN	0	NaN	6759	3083	9841
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9845	27.238	NaN	12435	30	0	5115.6	0.106				-1	PLMTQLLMK	9	72	369.5363876283874	1105.5873334853623	3	369.53662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Oxidation (M)	_PLM(Oxidation (M))TQLLM(Oxidation (M))K_	ENST00000506857.5_1_5:61654086-61657088:+|nuORF	31.529811441608018	0.5085848003137583	4				NaN	NaN	0	NaN	6760	3083	9841
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9846	27.24	NaN	15826	30	0	7514	0.106	+			14287	GSVSLWSLLL	10	79	537.811386147534	1073.608219361868	2	538.3169555664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GSVSLWSLLL_	ASXL1|p.G1376Vfs*74|1|0.09|ENSG00000171456|chr20:32436834-32436834|G/-|frameshift_variant	41.42661286455405	0.5359995577334734	4				NaN	NaN	0	NaN	6761	3083	9841
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9847	27.242	NaN	4754.8	30	0	653.94	0.034	+			512	ACLKKIRM	8	71	481.7863665473317	961.5581801614634	2	481.7870178222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ACLKKIRM_	ENSG00000166946|ENST00000300213|CCNDBP1;ENST00000563065.5_1_15:43477607-43487036:+|nuORF;ENST00000564630.5_1_15:43478389-43485079:+|nuORF;ENST00000566882.5_1_15:43482236-43485079:+|nuORF;ENST00000568936.1_1_15:43482505-43485079:+|nuORF;ENST00000569745.5_1_15:43477607-43487036:+|nuORF;nc|ENSG00000166946|O95273-2|CCNDBP1;nc|ENSG00000166946|O95273-3|CCNDBP1;nc|ENSG00000166946|O95273-4|CCNDBP1	44.53106598305862	0.628196326904373	4				NaN	NaN	0	NaN	6762	3083	9841
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9848	27.242	NaN	5094.9	30	0	1136.5	0.138				-1	 	0	56	344.2297152950653	343.22243882846533	1	344.22491455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6763	3083	9841
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9866	27.281	NaN	18792	30	0	1761.9	0.214			+	38293	SQSQEATKNQ	10	99	560.7648978125009	1119.5152426918016	2	560.7661743164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SQSQEATKNQ_	REV__ENST00000432012.1_1_1:24792390-24792576:+|nuORF	50.033510581677724	0.4566913063131936	4				NaN	NaN	0	NaN	6778	3086	9865
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9867	27.284	NaN	18207	30	0	4327.1	0.106				-1	 	0	76	361.55654418207274	1081.6478031464183	3	361.55706787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6779	3086	9865
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9868	27.286	NaN	13843	30	0	1117.2	0.106			+	50750	YEKILVKN	8	85	503.8001169757714	NaN	0	503.7999572753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YEKILVKN_	REV__ENSG00000180543|ENST00000322128|TSPYL5	68.78682469695295	1.7418937515398478	4				NaN	NaN	0	NaN	6780	3086	9865
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9869	27.288	NaN	21298	30	0	4893.7	0.106	+			22236	KSYFSGLSK	9	96	508.77355452111794	NaN	0	508.77398681640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KSYFSGLSK_	ENSG00000023330|ENST00000484952|ALAS1	72.2432373244024	0.09796301979040985	4				NaN	NaN	0	NaN	6781	3086	9865
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9870	27.29	NaN	13977	30	0	2075.9	0.106			+	35701	SDKMGLEK	8	75	454.23110521101705	906.4476574888341	2	454.2308654785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SDKMGLEK_	REV__ENSG00000169495|ENST00000302495|HTRA4	115.49404669440601	0.24099756539272307	4				NaN	NaN	0	NaN	6782	3086	9865
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9871	27.292	NaN	32641	30	0	6544.5	0.036	+			40565	SVAECQLMK	9	92	533.2558692432798	1064.4971855533595	2	533.2576293945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_SVAEC(Carbamidomethyl (C))QLMK_	ENSG00000105221|ENST00000392038|AKT2;ENST00000391844.8_1_19:40739781-40791100:-|nuORF;ENST00000537834.5_1_19:40745726-40771198:-|nuORF;nc|ENSG00000105221|P31751-2|AKT2	150.36159442982594	0.006784847064083231	4				NaN	NaN	0	NaN	6783	3086	9865
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9872	27.292	NaN	20186	30	0	3709.8	0.139	+			6295	AVSTFAMVK	9	81	485.25688393731195	968.4992149414239	2	485.257080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_AVSTFAM(Oxidation (M))VK_	ENSG00000172893|ENST00000355527|DHCR7;ENST00000534701.1_1_11:71149825-71152361:-|nuORF	107.00750918261382	0.032051501805654005	4				NaN	NaN	0	NaN	6784	3086	9865
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9890	27.332	NaN	35851	30	0	4574.2	0.214	+			21230	KLIDRTESL	9	86	537.811386147534	1073.608219361868	2	537.8117065429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KLIDRTESL_	ENSG00000130592|ENST00000311604|LSP1;ENST00000485341.5_1_11:1902588-1908790:+|nuORF;nc|ENSG00000130592|P33241-2|LSP1;nc|ENSG00000130592|P33241-3|LSP1	141.52041321563706	0.009766778904176347	4				NaN	NaN	0	NaN	6799	3089	9889
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9891	27.335	NaN	23881	30	0	6700.6	0.106				-1	 	0	80	438.26291257269423	874.5112722121885	2	438.2631530761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6800	3089	9889
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9892	27.337	NaN	10688	30	0	1174.6	0.106	+			23946	LDRETEEL	8	79	502.7478274673702	1003.4811020015404	2	502.7482604980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LDRETEEL_	ENSG00000107223|ENST00000224073|EDF1;nc|ENSG00000107223|O60869-2|EDF1;nc|ENSG00000107223|O60869-3|EDF1	98.62937762414208	0.25143494708580966	4				NaN	NaN	0	NaN	6801	3089	9889
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9893	27.339	NaN	12693	30	0	3062.5	0.106	+			9032	EGEGISKVQR	10	82	551.7956958912529	1101.5768388493057	2	551.7964477539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EGEGISKVQR_	DOCK8|p.E1615Dfs*7|1|0.05|ENSG00000107099|chr9:433933-433934|-/C|frameshift_variant;ENSG00000107099|ENST00000432829|DOCK8;nc|ENSG00000107099|Q8NF50-2|DOCK8;nc|ENSG00000107099|Q8NF50-3|DOCK8;nc|ENSG00000107099|Q8NF50-4|DOCK8	49.536043120802724	0.461275219792494	4				NaN	NaN	0	NaN	6802	3089	9889
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9894	27.341	NaN	6356.9	30	0	1230.5	0.106				-1	 	0	57	351.19590166015456	350.18862519355457	1	351.1963195800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6803	3089	9889
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9895	27.343	NaN	20529	30	0	1782.1	0.036			+	29514	PDPLPPSQFP	10	87	547.7811507431699	1093.5477485531396	2	547.7826538085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PDPLPPSQFP_	REV__ENST00000392133.7_1_2:217070291-217070480:+|nuORF	82.7504851949679	0.1731497355276012	4				NaN	NaN	0	NaN	6804	3089	9889
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9896	27.343	NaN	6616.5	30	0	1938.2	0.143	+			8661	EDSGSDPEDTY	11	76	607.7200013190906	1213.425449704981	2	607.7208251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EDSGSDPEDTY_	ENSG00000105486|ENST00000263274|LIG1;ENST00000599322.5_1_19:48618908-48621044:-|nuORF;nc|ENSG00000105486|P18858-3|LIG1	49.44154591367651	0.42875387410569	4				NaN	NaN	0	NaN	6805	3089	9889
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9914	27.383	NaN	73068	30	0	36130	0.179	+			6218	AVQTAAKELLK	11	94	391.23946465419795	1170.6965645627938	3	391.2396240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVQTAAKELLK_	ENSG00000123992|ENST00000273075|DNPEP;ENST00000430206.5_1_2:220251659-220252065:-|nuORF;ENST00000460963.5_1_2:220250088-220252486:-|nuORF;ENST00000523527.5_1_2:220250965-220252516:-|nuORF;nc|ENSG00000123992|Q9ULA0-2|DNPEP	73.90049950687481	0.20322248490973555	4				NaN	NaN	0	NaN	6820	3092	9913
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9915	27.386	NaN	64408	30	0	12973	0.106				-1	 	0	89	509.29998222179864	1016.5854115103973	2	509.300537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6821	3092	9913
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9916	27.388	NaN	11940	30	0	1104	0.106	+			25792	LSASGTLTSGR	11	85	525.2837631217723	1048.5529733103444	2	525.28515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSASGTLTSGR_	ENST00000405409.6_2_22:36174106-36177783:-|nuORF	80.45461616416974	0.1485828924062742	4				NaN	NaN	0	NaN	6822	3092	9913
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9917	27.39	NaN	21994	30	0	2274.7	0.106	+			12469	GEDKTSAQVSL	11	81	567.7847558740443	1133.5549588148886	2	567.785400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEDKTSAQVSL_	ENSG00000110002|ENST00000456829|VWA5A;nc|ENSG00000110002|O00534-2|VWA5A;nc|ENSG00000110002|O00534-3|VWA5A;nc|ENSG00000110002|O00534-4|VWA5A;VWA5A|p.D273Ifs*24|1|0.19|ENSG00000110002|chr11:124123014-124123014|A/-|frameshift_variant;VWA5A|p.D571Mfs*3|1|0.56|ENSG00000110002|chr11:124137094-124137094|A/-|frameshift_variant;VWA5A|p.G366Afs*38|1|0.21|ENSG00000110002|chr11:124123733-124123733|G/-|frameshift_variant	147.30332882356183	7.500266899103772E-05	4				NaN	NaN	0	NaN	6823	3092	9913
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9918	27.391	NaN	7130	30	0	644.84	0.106	+			27646	MPRVQTQQY	9	77	575.7859804959784	1149.5574080587567	2	575.7877197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MPRVQTQQY_	ENSG00000138674|ENST00000395310|SEC31A;nc|ENSG00000138674|O94979-10|SEC31A;nc|ENSG00000138674|O94979-2|SEC31A;nc|ENSG00000138674|O94979-3|SEC31A;nc|ENSG00000138674|O94979-4|SEC31A;nc|ENSG00000138674|O94979-6|SEC31A;nc|ENSG00000138674|O94979-7|SEC31A;nc|ENSG00000138674|O94979-8|SEC31A;nc|ENSG00000138674|O94979-9|SEC31A;SEC31A|p.P1058Qfs*62|1|0.4|ENSG00000138674|chr4:82827487-82827487|G/-|frameshift_variant	82.7504851949679	0.08565546331141553	4				NaN	NaN	0	NaN	6824	3092	9913
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9919	27.393	NaN	13207	30	0	1854.9	0.106	+			23382	LAADCAHEL	9	86	500.2319735588104	998.4493941844208	2	500.2316589355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_LAADC(Carbamidomethyl (C))AHEL_	ENSG00000157379|ENST00000288111|DHRS1;ENST00000558340.1_1_14:24760067-24761569:-|nuORF;ENST00000561137.5_1_14:24760413-24761527:-|nuORF;ENST00000561273.5_1_14:24760714-24761569:-|nuORF	93.19546047674547	0.05585629608842056	4				NaN	NaN	0	NaN	6825	3092	9913
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9920	27.395	NaN	8357.6	30	0	946.23	0.036	+			25533	LPTKQNEEF	9	84	553.2793089481545	1104.544064963109	2	553.2801513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LPTKQNEEF_	ENSG00000157916|ENST00000605895|RER1	98.58198989935565	0.04066992115528678	4				NaN	NaN	0	NaN	6826	3092	9913
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9938	27.432	NaN	14543	30	0	1938.4	0.214			+	50844	YETRVPPGY	9	82	541.2687502272986	1080.522947521397	2	541.773193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YETRVPPGY_	REV__ENSG00000124193|ENST00000244020|SRSF6;REV__nc|ENSG00000124193|Q13247-3|SRSF6;REV__SRSF6|p.A312Gfs*18|1|0.11|ENSG00000124193|chr20:43460957-43460958|-/A|frameshift_variant;REV__SRSF6|p.G240Afs*50|1|0.35|ENSG00000124193|chr20:43460742-43460742|A/-|frameshift_variant	67.49366992349736	0.1516260258713357	4				NaN	NaN	0	NaN	6841	3095	9937
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9939	27.436	NaN	14181	30	0	4533.1	0.106	+			2902	ASAVLHERYL	10	72	386.8802760838523	1157.618998851757	3	386.88037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASAVLHERYL_	ENSG00000140323|ENST00000267889|DISP2	40.77816245573522	0.5419747034533848	4				NaN	NaN	0	NaN	6842	3095	9937
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9940	27.438	NaN	22727	30	0	3868.2	0.106				-1	 	0	81	533.2816721402257	1064.5487913472514	2	533.2827758789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6843	3095	9937
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9941	27.439	NaN	6781.5	30	0	704.96	0.106	+			38434	SSALHSLLK	9	77	478.28160703185404	954.5486611305081	2	478.2820129394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSALHSLLK_	ENSG00000164944|ENST00000297591|VIRMA;ENST00000521080.5_1_8:95511544-95524374:-|nuORF;nc|ENSG00000164944|Q69YN4-3|VIRMA	68.84614121027924	0.14577793175421136	4				NaN	NaN	0	NaN	6844	3095	9937
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9942	27.441	NaN	9591	30	0	1662.3	0.106				-1	 	0	77	539.299179452356	538.291902985756	1	539.2994995117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6845	3095	9937
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9943	27.443	NaN	8768.9	30	0	1066.1	0.034			+	-1	VTMRMTSP	8	76	469.72472497193934	937.4348970106787	2	469.7253723144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_VTMRM(Oxidation (M))TSP_	REV__ENSG00000131686|ENST00000377443|CA6;REV__nc|ENSG00000131686|P23280-2|CA6;REV__nc|ENSG00000131686|P23280-3|CA6	64.20726635412375	0.4601301477144759	4				NaN	NaN	0	NaN	6846	3095	9937
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9944	27.444	NaN	15583	30	0	5494.6	0.143				-1	 	0	88	620.8658673110839	1239.7171816889677	2	620.8667602539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6847	3095	9937
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9962	27.483	NaN	52925	30	0	24667	0.214	+			48694	VTTGSEGLLK	10	83	502.78296832673857	1003.5513837202772	2	502.7844543457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTTGSEGLLK_	ENSG00000134987|ENST00000513710|WDR36;ENST00000505303.5_1_5:110428043-110447004:+|nuORF;nc|ENSG00000134987|Q8NI36|WDR36	190.62248201133156	0.00017197548059753575	4				NaN	NaN	0	NaN	6862	3098	9961
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9963	27.487	NaN	31269	30	0	4745.9	0.106	+			39298	STASMGGWTK	10	92	513.2389181826435	1024.4632834320869	2	513.239501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STASMGGWTK_	ENSG00000166348|ENST00000687698|USP54;ENST00000498143.5_1_10:75279553-75335416:-|nuORF;nc|ENSG00000166348|Q70EL1-6|USP54;nc|ENSG00000166348|Q70EL1-7|USP54;USP54|p.R831Tfs*6|1|0.07|ENSG00000166348|chr10:73519973-73519983|CAGGGCAAGTC/-|frameshift_variant	139.38205640894643	0.010918844784185366	4				NaN	NaN	0	NaN	6863	3098	9961
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9964	27.489	NaN	14455	30	0	3372.6	0.106				-1	 	0	78	498.29719989475296	994.579846856306	2	498.2975769042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6864	3098	9961
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9965	27.49	NaN	10567	30	0	1160.2	0.106				-1	 	0	78	554.8266566073856	1107.6387602815712	2	554.8275756835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6865	3098	9961
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9966	27.492	NaN	26590	30	0	15968	0.106	+			41405	SVMRPEQIMK	10	81	406.8818164413831	1217.6236199243492	3	406.88232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVMRPEQIMK_	ENSG00000185883|ENST00000330398|ATP6V0C	41.080066990542036	0.5391928043837881	4				NaN	NaN	0	NaN	6866	3098	9961
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9967	27.494	NaN	6766.9	30	0	735.49	0.034	+			363	AAQNSRLSL	9	69	480.2663803116115	958.518207690023	2	480.2669372558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AAQNSRLSL_	ENSG00000008869|ENST00000233099|HEATR5B;nc|ENSG00000008869|Q9P2D3-2|HEATR5B;nc|ENSG00000008869|Q9P2D3-3|HEATR5B	58.2462437865262	0.22823408064396822	4				NaN	NaN	0	NaN	6867	3098	9961
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9968	27.495	NaN	12995	30	0	1282.9	0.139				-1	 	0	78	467.7707227712112	933.5268926092224	2	467.77093505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6868	3098	9961
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9986	27.532	NaN	61591	30	0	32416	0.214	+			48687	VTTGGMVLK	9	84	453.25916600551994	904.5037790778399	2	453.25958251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTTGGMVLK_	ENSG00000173369|ENST00000509305|C1QB;nc|ENSG00000173369|P02746|C1QB	131.03138772384656	0.014687601201650916	4				NaN	NaN	0	NaN	6883	3101	9985
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9987	27.536	NaN	47117	30	0	5039	0.106				-1	 	0	94	550.2921563054699	1098.5697596777397	2	550.29296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6884	3101	9985
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9988	27.538	NaN	37505	30	0	4207.1	0.106				-1	 	0	89	543.8179773752521	1085.621401817304	2	543.8191528320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6885	3101	9985
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9989	27.54	NaN	20738	30	0	4972.7	0.106	+			36499	SEYIHAQVA	9	77	509.25255202334074	1016.4905511134815	2	509.2535400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SEYIHAQVA_	ENSG00000122642|ENST00000242209|FKBP9;ENST00000455909.5_1_7:55750344-55756724:-|nuORF;ENST00000471066.1_1_7:33042511-33044960:+|nuORF;ENST00000475220.1_1_7:33038205-33044960:+|nuORF;nc|ENSG00000122642|O95302-2|FKBP9;nc|ENSG00000122642|O95302-3|FKBP9;nc|ENSG00000291029|Q75LS8|FKBP9P1	60.11826168202944	0.21262886028301267	4				NaN	NaN	0	NaN	6886	3101	9985
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9990	27.542	NaN	45328	30	0	6142.4	0.106	+			15670	GVMRVGLVAK	10	101	515.3146421365877	1028.6147313399754	2	515.3154907226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GVMRVGLVAK_	ENSG00000129351|ENST00000588657|ILF3;ENST00000587928.5_1_19:10781281-10792148:+|nuORF;nc|ENSG00000129351|Q12906-2|ILF3;nc|ENSG00000129351|Q12906-3|ILF3;nc|ENSG00000129351|Q12906-4|ILF3;nc|ENSG00000129351|Q12906-5|ILF3;nc|ENSG00000129351|Q12906-6|ILF3;nc|ENSG00000129351|Q12906|ILF3	115.49404669440601	0.03369372856552391	4				NaN	NaN	0	NaN	6887	3101	9985
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9991	27.543	NaN	17652	30	0	1452	0.034	+			12871	GEQVAVKSL	9	90	465.7657226457566	929.5168923583133	2	465.7661437988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GEQVAVKSL_	ENSG00000162434|ENST00000342505|JAK1;ENST00000481702.1_1_1:65305238-65306936:-|nuORF	84.81729255234993	0.07947707105691067	4				NaN	NaN	0	NaN	6888	3101	9985
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9992	27.544	NaN	34388	30	0	7346.6	0.138				-1	 	0	67	435.7369434323939	869.4593339315878	2	435.7373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6889	3101	9985
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10008	27.579	NaN	26929	30	0	16269	0.214	+			15671	GVMRVGLVAK	10	77	343.8784197859921	1028.6134299581763	3	343.8792724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVMRVGLVAK_	ENSG00000129351|ENST00000588657|ILF3;ENST00000587928.5_1_19:10781281-10792148:+|nuORF;nc|ENSG00000129351|Q12906-2|ILF3;nc|ENSG00000129351|Q12906-3|ILF3;nc|ENSG00000129351|Q12906-4|ILF3;nc|ENSG00000129351|Q12906-5|ILF3;nc|ENSG00000129351|Q12906-6|ILF3;nc|ENSG00000129351|Q12906|ILF3	74.25504064058377	0.24255678544297835	4				NaN	NaN	0	NaN	6902	3104	10007
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10009	27.583	NaN	16894	30	0	2647.5	0.106	+			42314	TAFGHPQAY	9	82	496.2346844475301	990.4548159618603	2	496.2350158691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAFGHPQAY_	ENSG00000130340|ENST00000392185|SNX9	101.60071028292904	0.0375685401170269	4				NaN	NaN	0	NaN	6903	3104	10007
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10010	27.585	NaN	14097	30	0	1895.9	0.106				-1	 	0	79	510.2806830916856	509.2734066250856	1	510.2812194824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6904	3104	10007
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10011	27.587	NaN	13772	30	0	1334.2	0.106	+			50697	YEEQHPEL	8	88	522.7356744226031	1043.456795912006	2	522.7374877929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YEEQHPEL_	ENSG00000008517|ENST00000525643|IL32;nc|ENSG00000008517|P24001-3|IL32;nc|ENSG00000008517|P24001-4|IL32;nc|ENSG00000008517|P24001-5|IL32;nc|ENSG00000008517|P24001-6|IL32;nc|ENSG00000008517|P24001|IL32	87.69643885390035	0.28444366722805053	4				NaN	NaN	0	NaN	6905	3104	10007
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10012	27.588	NaN	14602	30	0	1484.4	0.106	+			1166	AENGKSNFL	9	81	490.24529968094924	978.4760464286985	2	490.24554443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AENGKSNFL_	B2M|p.V69Sfs*21|1|0.67|ENSG00000166710|chr15:44715554-44715555|-/A|frameshift_variant;B2M|p.V69Wfs*34|1|0.32|ENSG00000166710|chr15:44715555-44715555|A/-|frameshift_variant;B2M|p.Y98Lfs*5|1|0.08|ENSG00000166710|chr15:44715648-44715648|A/-|frameshift_variant;ENSG00000166710|ENST00000648006|B2M;ENST00000559720.5_1_15:45003705-45007919:+|nuORF	86.88156770896713	0.07365720931774442	4				NaN	NaN	0	NaN	6906	3104	10007
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10013	27.59	NaN	18735	30	0	4080.2	0.034	+			17615	IEHGQAVSL	9	73	477.2555832169714	952.4966135007428	2	477.2558898925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IEHGQAVSL_	ENSG00000112851|ENST00000284037|ERBIN;ENST00000506744.1_1_5:65372690-65374355:+|nuORF;nc|ENSG00000112851|Q96RT1-2|ERBIN;nc|ENSG00000112851|Q96RT1-3|ERBIN;nc|ENSG00000112851|Q96RT1-4|ERBIN;nc|ENSG00000112851|Q96RT1-5|ERBIN;nc|ENSG00000112851|Q96RT1-6|ERBIN;nc|ENSG00000112851|Q96RT1-7|ERBIN;nc|ENSG00000112851|Q96RT1-8|ERBIN;nc|ENSG00000112851|Q96RT1-9|ERBIN	82.7504851949679	0.08565546331141553	4				NaN	NaN	0	NaN	6907	3104	10007
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10014	27.591	NaN	9525.8	30	0	1949.1	0.14	+			51528	YVYEGVEAK	9	74	529.2642989588069	NaN	0	529.2639770507812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YVYEGVEAK_	ENSG00000145384|ENST00000274024|FABP2	72.87924865735499	0.09578366712754152	4				NaN	NaN	0	NaN	6908	3104	10007
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10031	27.627	NaN	26501	30	0	3718.5	0.214	+			38810	SSMVFTTSK	9	80	494.24371127530674	986.4728696174135	2	494.2441711425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSMVFTTSK_	ENSG00000112818|ENST00000230588|MEP1A	112.10723106719422	0.02684780151337622	4				NaN	NaN	0	NaN	6922	3107	10030
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10032	27.631	NaN	14300	30	0	2213.4	0.106				-1	 	0	76	412.7342454953069	823.4539380574138	2	412.7347106933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6923	3107	10030
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10033	27.633	NaN	20474	30	0	8614.3	0.106				-1	 	0	73	362.56861761985374	1084.6840234597612	3	362.569091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6924	3107	10030
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10034	27.635	NaN	18137	30	0	3875.7	0.106				-1	 	0	89	459.25559983392276	916.4966467346455	2	459.2558898925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6925	3107	10030
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10035	27.637	NaN	6596.8	30	0	616.18	0.106	+			41406	SVMRPEQIMK	10	80	609.8189307523347	1217.6233085714694	2	609.8202514648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVMRPEQIMK_	ENSG00000185883|ENST00000330398|ATP6V0C	115.91470973250675	0.03309960411491346	4				NaN	NaN	0	NaN	6926	3107	10030
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10036	27.638	NaN	10299	30	0	5904.6	0.106			+	23442	LADLMPLL	8	70	443.26103285689754	NaN	0	443.26104736328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LADLMPLL_	REV__ENSG00000175826|ENST00000574322|CTDNEP1;REV__ENST00000478867.1_1_3:113604431-113604875:+|nuORF;REV__ENST00000570484.1_1_17:7147506-7148078:-|nuORF	65.89745868150666	1.7418937515398478	4				NaN	NaN	0	NaN	6927	3107	10030
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10037	27.64	NaN	10072	30	0	2632.4	0.036	+			40779	SVDPNQYYK	9	77	557.2628903679159	1112.5112278026318	2	557.7642822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVDPNQYYK_	ENSG00000065427|ENST00000302445|KARS1;ENST00000566560.5_1_16:75668010-75682538:-|nuORF;nc|ENSG00000065427|Q15046-2|KARS1	34.172542307311794	0.4838870758800184	4				NaN	NaN	0	NaN	6928	3107	10030
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10054	27.675	NaN	120780	30	0	84371	0.214				-1	 	0	83	460.2527968158888	918.4910406985776	2	460.2533874511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6942	3110	10053
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10055	27.679	NaN	38870	30	0	3847.5	0.106	+			15331	GTVIVDSTVGK	11	91	538.3027019282879	1074.5908509233757	2	538.3037719726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTVIVDSTVGK_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	134.38175178908594	0.0009546753189824793	4				NaN	NaN	0	NaN	6943	3110	10053
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10056	27.681	NaN	12653	30	0	1865.9	0.106			+	18417	ISAGYKRII	9	82	510.81501128438583	NaN	0	510.80792236328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ISAGYKRII_	REV__tr|U7T3L5|U7T3L5_FUSNUMethioninesynthaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00451PE=3SV=1	46.45678178249821	0.2311111838007999	4				NaN	NaN	0	NaN	6944	3110	10053
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10057	27.683	NaN	10520	30	0	2235.3	0.106				-1	 	0	73	543.3494195182556	1084.684286103311	2	543.3505249023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6945	3110	10053
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10058	27.685	NaN	10756	30	0	1391.5	0.106	+			13785	GQHRTRGVL	9	70	341.8653974669385	1022.5743630010154	3	341.86590576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GQHRTRGVL_	ENST00000325321.7_1_19:51379973-51380176:+|nuORF	40.77816245573522	0.41113185337114944	4				NaN	NaN	0	NaN	6946	3110	10053
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10059	27.686	NaN	6902.2	30	0	554.98	0.106				-1	KNGAATGM	8	62	383.1819159040292	764.3492788748584	2	383.1819152832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_KNGAATGM(Oxidation (M))_	ENSG00000181143|ENST00000397910|MUC16	29.841539824830324	0.7289191502596711	4				NaN	NaN	0	NaN	6947	3110	10053
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10060	27.688	NaN	5985.8	30	0	2697.2	0.035				-1	 	0	52	328.8776428850814	983.6110992554443	3	328.8780517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6948	3110	10053
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10077	27.723	NaN	59237	30	0	15813	0.214	+			39748	STITGVMDK	9	98	476.2438805895463	950.4732082458926	2	476.244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STITGVMDK_	ENSG00000147872|ENST00000276914|PLIN2;PLIN2|p.V348*|1|0.15|ENSG00000147872|chr9:19116520-19116520|C/-|frameshift_variant	120.30596017624542	0.02101454110788768	4				NaN	NaN	0	NaN	6962	3113	10076
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10078	27.727	NaN	16512	30	0	4339.3	0.106	+			29406	PATAHPAL	8	68	389.2162816216547	776.4180103101094	2	389.21630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PATAHPAL_	ENST00000574902.5_1_16:3191344-3191665:+|nuORF	33.51558372728122	0.7005509609380386	4				NaN	NaN	0	NaN	6963	3113	10076
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10079	27.729	NaN	41633	30	0	28651	0.106				-1	 	0	71	340.868022649886	1019.582238549858	3	340.8684997558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6964	3113	10076
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10080	27.731	NaN	25831	30	0	11124	0.106	+			44495	TSSILTSK	8	80	418.73839846418304	NaN	0	418.73834228515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TSSILTSK_	ENST00000342085.8_1_16:2649834-2650143:+|nuORF	76.84663266511073	1.7418937515398478	4				NaN	NaN	0	NaN	6965	3113	10076
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10081	27.733	NaN	18595	30	0	3400.6	0.106	+			19852	KEEIIKTL	8	88	487.2995807251439	972.5846085170879	2	487.2997131347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEEIIKTL_	ENSG00000108298|ENST00000225430|RPL19;ENST00000423330.1_1_9:133527641-133527767:+|nuORF;ENST00000424919.1_1_X:150162237-150162561:+|nuORF;ENST00000432746.1_1_7:102781798-102782185:-|nuORF;ENST00000433839.1_1_10:122892628-122892781:-|nuORF;ENST00000498753.1_1_3:141762467-141763034:-|nuORF;ENST00000577759.1_1_17:37360679-37360898:+|nuORF	117.81106730687013	0.23768492115495982	4				NaN	NaN	0	NaN	6966	3113	10076
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10082	27.734	NaN	13413	30	0	946.34	0.037	+			50692	YEENSHLTSV	10	86	589.7687841241142	1177.5230153150283	2	589.7699584960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YEENSHLTSV_	ENSG00000157557|ENST00000360938|ETS2	136.98908636845044	0.01155686115611441	4				NaN	NaN	0	NaN	6967	3113	10076
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10083	27.735	NaN	18871	30	0	1659.6	0.141				-1	 	0	84	519.3026209633932	1036.5906889935864	2	519.3034057617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6968	3113	10076
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10101	27.775	NaN	37276	30	0	6356.5	0.214				-1	 	0	96	494.8050746401741	987.5955963471482	2	494.80535888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6983	3116	10100
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10102	27.778	NaN	46377	30	0	6367.6	0.106	+			10655	EYQKVGQSF	9	94	543.2661157310818	1084.5176785289634	2	543.26708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EYQKVGQSF_	ENSG00000178996|ENST00000381410|SNX18;nc|ENSG00000178996|Q96RF0-3|SNX18;nc|ENSG00000178996|Q96RF0|SNX18	254.97835724822855	3.69099526385709E-27	4				NaN	NaN	0	NaN	6984	3116	10100
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10103	27.78	NaN	20921	30	0	5649.7	0.106	+			4483	ATITDKELLK	10	77	377.89193707377615	1130.6539818215285	3	377.8921813964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATITDKELLK_	ENSG00000131503|ENST00000360839|ANKHD1;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	44.639436926238396	0.506394993251866	4				NaN	NaN	0	NaN	6985	3116	10100
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10104	27.782	NaN	11166	30	0	1971.2	0.106	+			4152	ATESGMLYH	9	87	504.72553278361033	1007.4365126340207	2	504.72607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATESGMLYH_	ENSG00000108559|ENST00000573584|NUP88;ENST00000574867.5_1_17:5292093-5322970:-|nuORF	138.4795579985376	0.011193365975340062	4				NaN	NaN	0	NaN	6986	3116	10100
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10105	27.784	NaN	9553.8	30	0	1917.7	0.106	+			4484	ATITDKELLK	10	77	566.3339984022182	1130.6534438712363	2	566.3348999023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATITDKELLK_	ENSG00000131503|ENST00000360839|ANKHD1;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	136.80661076175005	0.011605513008240568	4				NaN	NaN	0	NaN	6987	3116	10100
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10106	27.786	NaN	7086	30	0	2899.4	0.036	+			23626	LAPVRQQEL	9	74	527.3054406285498	1052.5963283238996	2	527.3067626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LAPVRQQEL_	ENSG00000163346|ENST00000368463|PBXIP1;nc|ENSG00000163346|Q96AQ6-2|PBXIP1	51.19269402634007	0.2889735674168909	4				NaN	NaN	0	NaN	6988	3116	10100
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10107	27.786	NaN	12532	30	0	1742.9	0.139			+	32933	REAHLVDP	8	72	468.7476254367043	935.4806979402086	2	468.7483215332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_REAHLVDP_	REV__CR1|p.P1583Lfs*44|1|0.22|ENSG00000203710|chr1:207609487-207609487|C/-|frameshift_variant;REV__CR1|p.P1583Lfs*44|1|0.22|ENSG00000203710|chr1:207609487-207609487|C/-|frameshift_variant;REV__CR1|p.P1583Lfs*44|1|0.22|ENSG00000203710|chr1:207609487-207609487|C/-|frameshift_variant;REV__ENSG00000197721|ENST00000508064|CR1L;REV__ENSG00000203710|ENST00000367049|CR1;REV__ENSG00000203710|ENST00000367049|CR1;REV__ENSG00000203710|ENST00000367049|CR1;REV__ENST00000367050.8_1_1:207669597-207732429:+|nuORF;REV__ENST00000434033.5_1_1:207669690-207707642:+|nuORF;REV__ENST00000436595.1_1_1:207669690-207743292:+|nuORF;REV__nc|ENSG00000197721|Q2VPA4-2|CR1L;REV__nc|ENSG00000197721|Q2VPA4-3|CR1L;REV__nc|ENSG00000203710|P17927|CR1;REV__nc|ENSG00000203710|P17927|CR1	45.9519527083369	0.6193794311207887	4				NaN	NaN	0	NaN	6989	3116	10100
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10125	27.826	NaN	25674	30	0	5903.2	0.214	+			48923	VVDQTTLMK	9	80	517.7805171016681	1033.5464812701362	2	517.781494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVDQTTLMK_	ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;TRRAP-ASNS|1|fusion;TRRAP-ASNS|2|fusion;TRRAP|p.A1620Cfs*35|1|0.27|ENSG00000196367|chr7:98949499-98949500|-/G|frameshift_variant;TRRAP|p.I564Hfs*9|1|0.29|ENSG00000196367|chr7:98910389-98910390|-/G|frameshift_variant;TRRAP|p.K3443Sfs*19|1|0.28|ENSG00000196367|chr7:99004246-99004246|A/-|frameshift_variant;TRRAP|p.L291*|1|0.36|ENSG00000196367|chr7:98900691-98900691|T/-|frameshift_variant;TRRAP|p.P1292Lfs*17|1|0.44|ENSG00000196367|chr7:98933258-98933258|C/-|frameshift_variant;TRRAP|p.P1360Afs*14|1|0.05|ENSG00000196367|chr7:98935641-98935642|-/GCAAATAA|frameshift_variant	160.8219353732433	0.004346709298329381	4				NaN	NaN	0	NaN	7004	3119	10124
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10126	27.829	NaN	36912	30	0	8874.8	0.106				-1	 	0	74	399.194725252807	796.374897572414	2	399.1950378417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7005	3119	10124
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10127	27.831	NaN	20141	30	0	2838.7	0.106	+			3637	ASWGGTIEK	9	92	474.7434239986045	947.472295064009	2	474.7428894042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASWGGTIEK_	ENSG00000144426|ENST00000683969|NBEAL1;NBEAL1|p.A1274Qfs*17|1|0.1|ENSG00000144426|chr2:203135766-203135766|A/-|frameshift_variant;NBEAL1|p.F1670Lfs*25|1|0.21|ENSG00000144426|chr2:203144843-203144843|T/-|frameshift_variant;NBEAL1|p.F2315Lfs*2|1|0.17|ENSG00000144426|chr2:203193900-203193900|T/-|frameshift_variant;NBEAL1|p.K2562Rfs*15|1|0.41|ENSG00000144426|chr2:203209306-203209306|A/-|frameshift_variant;NBEAL1|p.N2072Kfs*10|1|0.35|ENSG00000144426|chr2:203172825-203172826|-/A|frameshift_variant;NBEAL1|p.T1311Nfs*3|1|0.08|ENSG00000144426|chr2:203135875-203135876|-/A|frameshift_variant;nc|ENSG00000144426|Q6ZS30-1|NBEAL1;nc|ENSG00000144426|Q6ZS30|NBEAL1	101.25262130126117	0.03792372629710479	4				NaN	NaN	0	NaN	7006	3119	10124
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10128	27.833	NaN	13271	30	0	1826.3	0.106			+	-1	KSCLLHQTL	9	83	550.3025084579365	1098.5904639826729	2	550.3038940429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_KSC(Carbamidomethyl (C))LLHQTL_	REV__ENST00000321348.8_1_2:172412147-172412255:+|nuORF	85.16082228582465	0.07850854922700509	4				NaN	NaN	0	NaN	7007	3119	10124
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10129	27.835	NaN	17467	30	0	2718.1	0.106	+			30587	QAPQPQSSL	9	80	478.245252280447	954.475951627694	2	478.2457275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QAPQPQSSL_	ENSG00000143614|ENST00000368655|GATAD2B	110.11987700582712	0.028875675806141952	4				NaN	NaN	0	NaN	7008	3119	10124
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10130	27.837	NaN	12666	30	0	2918.3	0.03				-1	 	0	74	329.2192350043827	656.4239170755654	2	329.2197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7009	3119	10124
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10148	27.874	NaN	149850	30	0	60809	0.214	+			15243	GTTAVFINK	9	109	475.7682707220484	949.5219885108968	2	475.7685852050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTTAVFINK_	ASH1L|p.H1793Ifs*7|1|0.13|ENSG00000116539|chr1:155438778-155438778|G/-|frameshift_variant;ASH1L|p.I970Lfs*9|1|0.2|ENSG00000116539|chr1:155479962-155479962|T/-|frameshift_variant;ASH1L|p.K1222Rfs*11|4|0.27|ENSG00000116539|chr1:155479205-155479205|T/-|frameshift_variant;ASH1L|p.K1533Sfs*17|1|0.25|ENSG00000116539|chr1:155478272-155478272|T/-|frameshift_variant;ASH1L|p.K2377Nfs*5|1|0.28|ENSG00000116539|chr1:155354570-155354570|T/-|frameshift_variant;ASH1L|p.N1822Tfs*2|1|0.33|ENSG00000116539|chr1:155438690-155438690|T/-|frameshift_variant;ASH1L|p.R712Efs*23|3|0.35|ENSG00000116539|chr1:155480736-155480736|T/-|frameshift_variant;ASH1L|p.S2309Ifs*11|1|0.64|ENSG00000116539|chr1:155357635-155357636|-/T|frameshift_variant;ENSG00000116539|ENST00000392403|ASH1L;nc|ENSG00000116539|Q9NR48|ASH1L	139.97047562133406	0.010493916756945389	4				NaN	NaN	0	NaN	7024	3122	10147
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10149	27.877	NaN	25908	30	0	10569	0.106				-1	 	0	72	330.87413430850035	989.6005735257011	3	330.8746643066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7025	3122	10147
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10150	27.879	NaN	30409	30	0	3206.2	0.106	+			42844	TEEVELKF	8	91	497.75831843389614	993.5020839345923	2	497.7586364746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TEEVELKF_	ENSG00000025796|ENST00000369002|SEC63	60.97194046774394	0.49215940876911696	4				NaN	NaN	0	NaN	7026	3122	10147
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10151	27.881	NaN	28775	30	0	4892.5	0.106	+			6193	AVQQPFINK	9	95	522.7947385433463	1043.5749241534925	2	522.7957153320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVQQPFINK_	ENSG00000186260|ENST00000571589|MRTFB;nc|ENSG00000186260|Q9ULH7-4|MRTFB;nc|ENSG00000186260|Q9ULH7|MRTFB	111.64827973302667	0.027316110422332632	4				NaN	NaN	0	NaN	7027	3122	10147
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10152	27.883	NaN	12731	30	0	1529.3	0.106	+			24316	LFHPSNVEM	9	74	545.2544524871213	1088.4943520410425	2	545.255615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_LFHPSNVEM(Oxidation (M))_	ENSG00000151694|ENST00000310823|ADAM17	90.36981228632155	0.0638227155548745	4				NaN	NaN	0	NaN	7028	3122	10147
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10153	27.885	NaN	18823	30	0	2542.3	0.035	+			11186	FGWTCYLK	8	90	509.2469795450002	1016.4794061568005	2	509.2474060058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FGWTCYLK_	ENST00000374875.5_1_10:33468482-33468866:-|nuORF	71.29570347882199	0.39610197767395533	4				NaN	NaN	0	NaN	7029	3122	10147
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10154	27.885	NaN	42545	30	0	16835	0.144				-1	 	0	68	359.23719546719695	1074.689757001791	3	359.2376403808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7030	3122	10147
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10172	27.925	NaN	202730	30	0	33637	0.151			+	13875	GRAATMTD	8	65	440.6950401295779	879.3755273259558	2	440.6952209472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))GRAATM(Oxidation (M))TD_	REV__ENST00000380752.9_1_13:30087970-30088375:-|nuORF	68.78682469695295	0.41700713582915416	4				NaN	NaN	0	NaN	7045	3125	10171
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10173	27.928	NaN	34254	30	0	6308	0.106	+			720	AEAVKFVAENP	11	88	392.20811008462556	1173.6025008540767	3	392.2082824707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEAVKFVAENP_	tr|U7SZP6|U7SZP6_FUSNUEthanolamineutilizationproteinEutLOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00823PE=4SV=1	65.46538089061403	0.2746690761028526	4				NaN	NaN	0	NaN	7046	3125	10171
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10174	27.93	NaN	24295	30	0	2928.6	0.106	+			46522	VEWNKKEEL	9	97	587.8077697147165	1173.600986496233	2	587.8091430664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VEWNKKEEL_	BZW1|p.S325Rfs*19|1|0.04|ENSG00000082153|chr2:200819989-200819990|-/ACAATATAGAA|frameshift_variant;ENSG00000082153|ENST00000409600|BZW1;ENSG00000136261|ENST00000258761|BZW2;nc|ENSG00000082153|Q7L1Q6-3|BZW1;nc|ENSG00000082153|Q7L1Q6-4|BZW1	152.06079943815163	0.00638878961959199	4				NaN	NaN	0	NaN	7047	3125	10171
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10175	27.932	NaN	22187	30	0	3547.7	0.106				-1	 	0	88	511.77895981331875	1021.5433666934375	2	511.7796325683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7048	3125	10171
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10176	27.934	NaN	34098	30	0	14717	0.106			+	-1	IHRCVCKLT	9	88	557.7985994461238	NaN	0	557.7986450195312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))IHRCVCKLT_	REV__ENST00000526103.1_1_11:77064519-77066893:-|nuORF	56.72105179125745	0.16330365735109603	4				NaN	NaN	0	NaN	7049	3125	10171
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10177	27.935	NaN	14843	30	0	4672.8	0.106			+	33863	RRKTKAKV	8	77	329.55795626364164	985.652039391125	3	329.5584411621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RRKTKAKV_	REV__ENSG00000187742|ENST00000375807|SECISBP2;REV__ENST00000498819.1_1_9:91963122-91972225:+|nuORF;REV__nc|ENSG00000187742|Q96T21-2|SECISBP2;REV__nc|ENSG00000187742|Q96T21-3|SECISBP2	12.959181472943097	0.7887000251064199	4				NaN	NaN	0	NaN	7050	3125	10171
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10178	27.937	NaN	14832	30	0	1272.1	0.036			+	7268	DANAFVSAVR	10	90	525.2718474314713	1048.5291419297425	2	525.2728271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DANAFVSAVR_	REV__ENSG00000163939|ENST00000707071|PBRM1;REV__ENST00000462207.1_1_3:52620428-52643468:-|nuORF;REV__nc|ENSG00000163939|Q86U86-2|PBRM1;REV__nc|ENSG00000163939|Q86U86-3|PBRM1;REV__nc|ENSG00000163939|Q86U86-4|PBRM1;REV__nc|ENSG00000163939|Q86U86-5|PBRM1;REV__nc|ENSG00000163939|Q86U86-7|PBRM1;REV__nc|ENSG00000163939|Q86U86-8|PBRM1;REV__nc|ENSG00000163939|Q86U86-9|PBRM1;REV__nc|ENSG00000163939|Q86U86|PBRM1;REV__PBRM1|p.H1521Pfs*95|1|0.12|ENSG00000163939|chr3:52554771-52554772|-/G|frameshift_variant;REV__PBRM1|p.L1349Wfs*35|1|0.5|ENSG00000163939|chr3:52563324-52563324|G/-|frameshift_variant	60.11826168202944	0.36476464221954025	4				NaN	NaN	0	NaN	7051	3125	10171
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10196	27.974	NaN	414310	30	0	323350	0.148				-1	 	0	70	343.1983934912441	684.3822340492882	2	343.1988830566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7066	3128	10195
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10197	27.976	NaN	61711	30	0	14444	0.106	+			16846	HPEKLATVL	9	98	504.29745623900806	1006.5803595448161	2	504.2978820800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HPEKLATVL_	ENSG00000164934|ENST00000612750|DCAF13;ENST00000521716.1_1_8:104427674-104432721:+|nuORF;nc|ENSG00000164934|Q9NV06-2|DCAF13	77.31757898189308	0.1091473830098891	4				NaN	NaN	0	NaN	7067	3128	10195
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10198	27.978	NaN	29927	30	0	3756.2	0.106	+			14606	GTGASGSFKLN	11	89	519.7637955442726	1037.5130381553452	2	519.7647705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTGASGSFKLN_	ENSG00000124575|ENST00000244534|H1-3;ENSG00000124610|ENST00000244573|H1-1;ENSG00000168298|ENST00000304218|H1-4;ENSG00000184357|ENST00000331442|H1-5;ENSG00000187837|ENST00000343677|H1-2	86.88156770896713	0.11154061753057586	4				NaN	NaN	0	NaN	7068	3128	10195
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10199	27.98	NaN	16418	30	0	2770.7	0.106	+			48200	VTAKELSLVNK	11	86	601.3609304845004	1200.7073080358007	2	601.3615112304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTAKELSLVNK_	ENSG00000050405|ENST00000341247|LIMA1;LIMA1|p.T536Lfs*38|2|0.4|ENSG00000050405|chr12:50177739-50177739|G/-|frameshift_variant;nc|ENSG00000050405|Q9UHB6-4|LIMA1	147.57670432137974	7.454744483674588E-05	4				NaN	NaN	0	NaN	7069	3128	10195
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10200	27.982	NaN	8911.8	30	0	918.28	0.106	+			78	AAAYPHTSL	9	77	465.7370650784313	929.4595772236627	2	465.73736572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AAAYPHTSL_	ENSG00000142599|ENST00000400908|RERE;nc|ENSG00000142599|Q9P2R6-2|RERE;RERE|p.Q899L|1|0.36|ENSG00000142599|chr1:8360811-8360811|T/A|missense_variant;RERE|p.S1084Rfs*173|1|0.21|ENSG00000142599|chr1:8360258-8360258|C/-|frameshift_variant;RERE|p.T1358Dfs*37|1|0.36|ENSG00000142599|chr1:8358464-8358465|-/G|frameshift_variant	55.50420428727701	0.2510918378945873	4				NaN	NaN	0	NaN	7070	3128	10195
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10201	27.984	NaN	13795	30	0	1292.9	0.106	+			34494	RVFSWSQAK	9	97	554.7978054569644	1107.5810579807287	2	554.7991943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RVFSWSQAK_	ENST00000286692.8_1_1:111682258-111682414:-|nuORF	112.10723106719422	0.02684780151337622	4				NaN	NaN	0	NaN	7071	3128	10195
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10202	27.986	NaN	23836	30	0	5743.6	0.034				-1	 	0	89	458.7580571414194	915.5015613496388	2	458.75848388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7072	3128	10195
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10220	28.022	NaN	22369	30	0	4106.4	0.215				-1	PENTVGQRM	9	96	524.2477039032184	1046.4808548732367	2	525.2398681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_PENTVGQRM(Oxidation (M))_	ENST00000470944.1_1_21:33038770-33039596:+|nuORF	37.15910966729921	0.4535818937225704	4				NaN	NaN	0	NaN	7087	3131	10219
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10221	28.026	NaN	12855	30	0	917.77	0.106	+			4761	ATNAACASLLK	11	87	560.2940665827043	1118.5735802322085	2	560.2952270507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_ATNAAC(Carbamidomethyl (C))ASLLK_	ENSG00000134996|ENST00000346234|OSTF1;OSTF1|p.K191Rfs*11|1|0.32|ENSG00000134996|chr9:75140914-75140914|A/-|frameshift_variant	160.9127304478731	5.2340329482572136E-05	4				NaN	NaN	0	NaN	7088	3131	10219
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10222	28.028	NaN	12302	30	0	1190.7	0.106	+			35251	SALHIAIEK	9	81	491.29092354504587	980.5672941568918	2	491.28997802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SALHIAIEK_	ENSG00000187688|ENST00000338560|TRPV2;TRPV2|p.I444Sfs*23|3|0.39|ENSG00000187688|chr17:16427521-16427521|G/-|frameshift_variant	40.05817265558897	0.419577045485086	4				NaN	NaN	0	NaN	7089	3131	10219
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10223	28.03	NaN	9175.6	30	0	1254.6	0.106	+			20575	KFTPVASKF	9	91	512.7944070529062	1023.5742611726124	2	512.7948608398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KFTPVASKF_	ENSG00000159840|ENST00000322764|ZYX;ENST00000446634.1_1_7:143080130-143081191:+|nuORF;nc|ENSG00000159840|Q15942-2|ZYX	120.30596017624542	0.02101454110788768	4				NaN	NaN	0	NaN	7090	3131	10219
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10224	28.031	NaN	9548	30	0	1760.2	0.106	+			16545	HEVMEQQTL	9	79	557.7627769014226	1113.5110008696452	2	557.7635498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HEVMEQQTL_	ENSG00000104738|ENST00000649973|MCM4;MCM4|p.T629Qfs*18|2|0.31|ENSG00000104738|chr8:47971419-47971419|A/-|frameshift_variant	54.722347961057174	0.257609425301511	4				NaN	NaN	0	NaN	7091	3131	10219
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10225	28.033	NaN	16538	30	0	1441.8	0.035	+			36200	SELLKRTAL	9	91	515.8158167432695	1029.6170805533388	2	515.8165893554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SELLKRTAL_	ENSG00000115947|ENST00000392857|ORC4;ENST00000495601.1_1_2:148716324-148733527:-|nuORF	82.7504851949679	0.08565546331141553	4				NaN	NaN	0	NaN	7092	3131	10219
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10226	28.034	NaN	28169	30	0	5044.6	0.141	+			29311	NYNNQSSNF	9	86	544.2250496995297	1086.4355464658593	2	544.2259521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NYNNQSSNF_	chr12:54282662-54282800|482|460.96|0.0|25.46|+|ENST00000677249|HNRNPA1,HNRNPA1;ENSG00000135486|ENST00000340913|HNRNPA1;ENSG00000139675|ENST00000357495|HNRNPA1L2;ENSG00000224578|ENST00000565308|HNRNPA1L3;ENST00000411857.2_1_1:179425361-179425934:-|nuORF;ENST00000432375.1_1_6:32293532-32293889:+|nuORF;ENST00000444886.1_1_9:128358610-128358904:+|nuORF;nc|ENSG00000135486|P09651-2|HNRNPA1;nc|ENSG00000135486|P09651-3|HNRNPA1	154.1183686248401	0.005909203230691971	4				NaN	NaN	0	NaN	7093	3131	10219
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10240	28.065	NaN	85843	30	0	19189	0.172	+			41736	SVSHFGKQAAL	11	95	572.8096858119878	1143.6048186907756	2	572.810791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSHFGKQAAL_	PTPRZ1|p.R205H|1|0.16|ENSG00000106278|chr7:121976846-121976846|G/A|missense_variant	80.91624569148213	0.14473443340275	4				NaN	NaN	0	NaN	7104	3134	10239
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10241	28.068	NaN	68411	30	0	18265	0.106	+			44504	TSSRVDHVM	9	91	524.2477039032184	1046.4808548732367	2	524.24853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_TSSRVDHVM(Oxidation (M))_	ENSG00000109674|ENST00000264596|NEIL3	71.29570347882199	0.13518600952103718	4				NaN	NaN	0	NaN	7105	3134	10239
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10242	28.07	NaN	30680	30	0	6519.4	0.106	+			11655	FQHVGQTL	8	80	465.24486047333596	928.475168013472	2	465.2454528808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FQHVGQTL_	ENSG00000112159|ENST00000369393|MDN1;MDN1|p.L4077Cfs*15|1|0.16|ENSG00000112159|chr6:89680625-89680625|G/-|frameshift_variant;MDN1|p.L5278Ffs*6|1|0.18|ENSG00000112159|chr6:89652273-89652274|-/A|frameshift_variant	111.64827973302667	0.24425243057279236	4				NaN	NaN	0	NaN	7106	3134	10239
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10243	28.072	NaN	16697	30	0	2916.9	0.106	+			1884	AILTTVTQK	9	83	487.79719921505057	973.5798454969012	2	487.7974853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AILTTVTQK_	ENSG00000198677|ENST00000358746|SKIC3;ENST00000513232.1_1_5:94857997-94861145:-|nuORF	112.41091882917199	0.026537921851008135	4				NaN	NaN	0	NaN	7107	3134	10239
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10244	28.074	NaN	38485	30	0	6217.4	0.106	+			15365	GTVVGLVNK	9	86	443.77120997017323	885.5278670071465	2	443.7712707519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTVVGLVNK_	ASH1L|p.H1793Ifs*7|1|0.13|ENSG00000116539|chr1:155438778-155438778|G/-|frameshift_variant;ASH1L|p.I970Lfs*9|1|0.2|ENSG00000116539|chr1:155479962-155479962|T/-|frameshift_variant;ASH1L|p.K1222Rfs*11|4|0.27|ENSG00000116539|chr1:155479205-155479205|T/-|frameshift_variant;ASH1L|p.K1533Sfs*17|1|0.25|ENSG00000116539|chr1:155478272-155478272|T/-|frameshift_variant;ASH1L|p.K2377Nfs*5|1|0.28|ENSG00000116539|chr1:155354570-155354570|T/-|frameshift_variant;ASH1L|p.N1822Tfs*2|1|0.33|ENSG00000116539|chr1:155438690-155438690|T/-|frameshift_variant;ASH1L|p.R712Efs*23|3|0.35|ENSG00000116539|chr1:155480736-155480736|T/-|frameshift_variant;ASH1L|p.S2309Ifs*11|1|0.64|ENSG00000116539|chr1:155357635-155357636|-/T|frameshift_variant;ENSG00000116539|ENST00000392403|ASH1L;nc|ENSG00000116539|Q9NR48|ASH1L	131.03138772384656	0.014687601201650916	4				NaN	NaN	0	NaN	7108	3134	10239
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10245	28.076	NaN	12703	30	0	2257.4	0.106	+			39528	STFSAPLNK	9	77	482.75659393062955	963.4986349280591	2	482.7581481933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STFSAPLNK_	ENSG00000163026|ENST00000295148|WDCP;nc|ENSG00000163026|Q9H6R7-2|WDCP	101.25262130126117	0.03792372629710479	4				NaN	NaN	0	NaN	7109	3134	10239
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10246	28.077	NaN	26473	30	0	21052	0.039	+			50780	YEMAVKILEE	10	57	408.8775055803563	1223.6106873412689	3	408.8779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YEMAVKILEE_	NAA15|p.A168V|1|0.26|ENSG00000164134|chr4:139342926-139342926|C/T|missense_variant	29.170058357718403	0.6416167986984785	4				NaN	NaN	0	NaN	7110	3134	10239
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10260	28.106	NaN	184090	30	0	49515	0.155	+			39466	STFDTQITK	9	92	520.7658525469985	1039.517152160797	2	520.7665405273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STFDTQITK_	ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC;PRKDC|p.D2437Wfs*3|1|0.11|ENSG00000253729|chr8:47840161-47840162|-/CA|frameshift_variant;PRKDC|p.K3681Nfs*6|1|0.32|ENSG00000253729|chr8:47785174-47785177|TTCT/-|frameshift_variant;PRKDC|p.M3670*|1|0.5|ENSG00000253729|chr8:47785212-47785212|T/-|frameshift_variant;PRKDC|p.M3846Cfs*12|1|0.13|ENSG00000253729|chr8:47779047-47779047|T/-|frameshift_variant;PRKDC|p.M4020Cfs*2|1|0.31|ENSG00000253729|chr8:47776968-47776968|T/-|frameshift_variant;PRKDC|p.N3605Kfs*3|1|0.22|ENSG00000253729|chr8:47788993-47788994|-/T|frameshift_variant;PRKDC|p.N4037Ifs*15|1|0.17|ENSG00000253729|chr8:47776916-47776916|T/-|frameshift_variant;PRKDC|p.R2704Gfs*13|2|0.34|ENSG00000253729|chr8:47834238-47834238|T/-|frameshift_variant;PRKDC|p.S3402Ifs*16|1|0.04|ENSG00000253729|chr8:47799302-47799303|-/AAACCGTGAGTTAGAGGAGGTAA|frameshift_variant;PRKDC|p.S4099Qfs*6|1|0.25|ENSG00000253729|chr8:47774265-47774265|A/-|frameshift_variant;PRKDC|p.T3268Pfs*7|1|0.5|ENSG00000253729|chr8:47803426-47803426|T/-|frameshift_variant;PRKDC|p.W3401Cfs*4|1|0.01|ENSG00000253729|chr8:47799304-47799305|-/AATGAATA|frameshift_variant	253.04765968294507	5.977823884745978E-20	4				NaN	NaN	0	NaN	7121	3137	10259
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10261	28.109	NaN	52251	30	0	18464	0.106	+			33026	REIQTAVRL	9	102	543.3242573047244	1084.6339616762486	2	543.3253784179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_REIQTAVRL_	ENSG00000124635|ENST00000339812|H2BC11;ENSG00000146047|ENST00000274764|H2BC1;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;nc|ENSG00000203814|Q5QNW6-2|H2BC18	90.14881205920913	0.06444578693273594	4				NaN	NaN	0	NaN	7122	3137	10259
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10262	28.111	NaN	25015	30	0	2795.2	0.106	+			16497	HETSNINDF	9	92	538.7352973379476	1075.456041742695	2	538.7360229492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HETSNINDF_	ENSG00000135821|ENST00000331872|GLUL;ENST00000603996.1_1_5:151230113-151230284:+|nuORF	58.22992032128504	0.22837015374068087	4				NaN	NaN	0	NaN	7123	3137	10259
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10263	28.113	NaN	11231	30	0	1782.8	0.106	+			7272	DANPETHAF	9	75	501.2192310969074	1000.4239092606148	2	501.2195739746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DANPETHAF_	ENSG00000100412|ENST00000216254|ACO2	54.722347961057174	0.257609425301511	4				NaN	NaN	0	NaN	7124	3137	10259
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10264	28.115	NaN	8795.8	30	0	1230.6	0.106				-1	LVNLFGCF	8	79	485.24703228088316	968.4795116285663	2	485.24774169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_LVNLFGC(Carbamidomethyl (C))F_	ENSG00000123143|ENST00000242783|PKN1;ENST00000585839.5_1_19:14578398-14580330:+|nuORF;nc|ENSG00000123143|Q16512-2|PKN1	44.53106598305862	0.628196326904373	4				NaN	NaN	0	NaN	7125	3137	10259
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10265	28.116	NaN	17238	30	0	8614.2	0.106			+	25415	LPLGDPSVVPT	11	74	365.541221095996	1093.601833888188	3	365.5415344238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LPLGDPSVVPT_	REV__ENSG00000164694|ENST00000297267|FNDC1;REV__FNDC1|p.T1443Nfs*81|2|0.16|ENSG00000164694|chr6:159239656-159239657|-/A|frameshift_variant;REV__FNDC1|p.T1443Pfs*84|1|0.31|ENSG00000164694|chr6:159239657-159239657|A/-|frameshift_variant;REV__nc|ENSG00000164694|Q4ZHG4-2|FNDC1	25.57405402267927	0.7215402271931856	4				NaN	NaN	0	NaN	7126	3137	10259
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10266	28.118	NaN	8412.8	30	0	1182.7	0.034				-1	 	0	62	454.78685275979933	907.5591525863987	2	454.78729248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7127	3137	10259
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10282	28.151	NaN	272740	30	0	68567	0.139	+			22654	KTYGEIFEK	9	81	557.7919481306453	1113.5693433280906	2	557.7928466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTYGEIFEK_	ENSG00000151366|ENST00000281031|NDUFC2;nc|ENSG00000151366|O95298-2|NDUFC2	171.33049012695201	0.0025398094975457087	4				NaN	NaN	0	NaN	7140	3140	10281
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10283	28.154	NaN	76515	30	0	12424	0.106	+			22655	KTYGEIFEK	9	106	372.1972156044211	1113.5698174134634	3	372.1976623535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTYGEIFEK_	ENSG00000151366|ENST00000281031|NDUFC2;nc|ENSG00000151366|O95298-2|NDUFC2	117.81106730687013	0.02252488733980868	4				NaN	NaN	0	NaN	7141	3140	10281
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10284	28.156	NaN	21345	30	0	10837	0.106			+	48097	VSTIKLGVD	9	82	466.2761561146167	930.5377592960334	2	466.2764892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSTIKLGVD_	REV__nc|ENSG00000166130|Q70UQ0-2|IKBIP;REV__nc|ENSG00000166130|Q70UQ0|IKBIP	52.936696900407355	0.27249468807391813	4				NaN	NaN	0	NaN	7142	3140	10281
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10285	28.158	NaN	15615	30	0	1876	0.106	+			46166	VDVEQHTL	8	77	470.7395057184125	939.464458503625	2	470.7403564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VDVEQHTL_	ENSG00000134057|ENST00000256442|CCNB1;ENSG00000157456|ENST00000288207|CCNB2;nc|ENSG00000134057|P14635-2|CCNB1	136.26810882979174	0.24432575764330772	4				NaN	NaN	0	NaN	7143	3140	10281
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10286	28.159	NaN	10536	30	0	1385.1	0.106				-1	 	0	78	493.77902784663746	985.543502760075	2	493.7796630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7144	3140	10281
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10287	28.161	NaN	5428.2	30	0	493.36	0.106	+			33798	RQIPYTMMK	9	71	584.3039699084998	1166.5933868837994	2	584.3052368164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RQIPYTMMK_	ENSG00000075415|ENST00000552981|SLC25A3;ENST00000546766.5_1_12:98989476-98995303:+|nuORF;ENST00000551123.5_1_12:98989412-98995303:+|nuORF;nc|ENSG00000075415|Q00325|SLC25A3	96.0336014099291	0.047854655524928534	4				NaN	NaN	0	NaN	7145	3140	10281
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10288	28.163	NaN	4877.8	30	0	801.09	0.035			+	3192	ASKKIEGKF	9	51	336.53385173438676	1006.5797258033604	3	336.5343933105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASKKIEGKF_	REV__tr|U7SUA5|U7SUA5_FUSNUOligopeptidaseFOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01160PE=3SV=1	23.04248740728303	0.5879033540491928	4				NaN	NaN	0	NaN	7146	3140	10281
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10306	28.2	NaN	38873	30	0	3814.8	0.214			+	8146	EAAEVARDVK	10	100	544.2899463055969	1086.5653396779937	2	544.2908935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EAAEVARDVK_	REV__ENSG00000154118|ENST00000284262|JPH3;REV__JPH3|p.T482Pfs*127|1|0.4|ENSG00000154118|chr16:87689800-87689800|C/-|frameshift_variant	85.86182877749512	0.1547657473298402	4				NaN	NaN	0	NaN	7161	3143	10305
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10307	28.204	NaN	18973	30	0	1445.1	0.106			+	25625	LQQAYAKEI	9	87	532.2920932091226	1062.5696334850452	2	532.29296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LQQAYAKEI_	REV__ENSG00000100266|ENST00000263246|PACSIN2;REV__ENSG00000165912|ENST00000298838|PACSIN3;REV__nc|ENSG00000100266|Q9UNF0-2|PACSIN2;REV__PACSIN2|p.R50H|1|0.36|ENSG00000100266|chr22:42893525-42893525|C/T|missense_variant;REV__PACSIN3|p.A47T|2|0.36|ENSG00000165912|chr11:47182475-47182475|C/T|missense_variant	136.26810882979174	0.012230845423532208	4				NaN	NaN	0	NaN	7162	3143	10305
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10308	28.206	NaN	26080	30	0	2708.6	0.106	+			24617	LGSALLGWGA	10	78	472.7634036191885	943.5122543051771	2	472.7629699707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LGSALLGWGA_	ENST00000542868.1_1_12:6950213-6950600:+|nuORF	65.80317337860623	0.313061058278602	4				NaN	NaN	0	NaN	7163	3143	10305
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10309	28.208	NaN	15298	30	0	1773.1	0.106	+			3232	ASLATTLTK	9	75	453.26811264688286	904.5216723605657	2	453.26837158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASLATTLTK_	ENSG00000129083|ENST00000439561|COPB1;ENST00000526191.1_1_11:14496007-14497407:-|nuORF	129.42129120953632	0.01549634589885217	4				NaN	NaN	0	NaN	7164	3143	10305
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10310	28.21	NaN	10951	30	0	1425.6	0.106	+			47169	VLSTCKNI	8	64	439.24358793483054	876.4726229364611	2	439.24395751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VLSTCKNI_	ENSG00000091106|ENST00000402280|NLRC4;NLRC4|p.F931Lfs*6|1|0.34|ENSG00000091106|chr2:32224755-32224755|A/-|frameshift_variant;NLRC4|p.L964Rfs*6|1|0.05|ENSG00000091106|chr2:32224657-32224658|-/ATAAAGTGTACTC|frameshift_variant	71.29570347882199	0.39610197767395533	4				NaN	NaN	0	NaN	7165	3143	10305
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10311	28.211	NaN	8672.1	30	0	1415.7	0.038				-1	WDPAAGHHCAL	11	72	617.7755394239517	1233.5365259147034	2	617.7759399414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_WDPAAGHHC(Carbamidomethyl (C))AL_	ENST00000572976.5_1_17:79872158-79873644:-|nuORF;ENST00000574992.5_1_17:79871999-79873399:-|nuORF	34.172542307311794	0.6313490974540716	4				NaN	NaN	0	NaN	7166	3143	10305
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10312	28.212	NaN	20441	30	0	1545.1	0.142			+	49482	VVYSREPY	8	95	506.758695950093	NaN	0	506.7524108886719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VVYSREPY_	REV__ENSG00000196455|ENST00000356763|PIK3R4;REV__ENST00000512362.5_1_3:130399450-130405229:-|nuORF;REV__ENST00000512677.1_1_3:130399450-130405071:-|nuORF	79.9392285194092	1.7418937515398478	4				NaN	NaN	0	NaN	7167	3143	10305
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10330	28.251	NaN	35984	30	0	4061.6	0.214	+			2686	AQNSVIIVDK	10	104	543.8108087614988	1085.6070645897976	2	543.811767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AQNSVIIVDK_	ENSG00000072274|ENST00000360110|TFRC	176.59839592901017	0.0015875574101036562	4				NaN	NaN	0	NaN	7182	3146	10329
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10331	28.255	NaN	43156	30	0	23577	0.106	+			34513	RVFVVGVGMTK	11	99	604.8441887676651	1207.67382460213	2	604.8446655273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_RVFVVGVGM(Oxidation (M))TK_	ENSG00000116171|ENST00000371514|SCP2;ENST00000528311.5_1_1:53392996-53413692:+|nuORF;nc|ENSG00000116171|P22307-3|SCP2;nc|ENSG00000116171|P22307-7|SCP2;nc|ENSG00000116171|P22307-8|SCP2	79.07001860377117	0.16012584326255155	4				NaN	NaN	0	NaN	7183	3146	10329
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10332	28.257	NaN	26696	30	0	2052.2	0.106			+	49483	VVYSREPY	8	96	506.758695950093	NaN	0	506.7582702636719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVYSREPY_	REV__ENSG00000196455|ENST00000356763|PIK3R4;REV__ENST00000512362.5_1_3:130399450-130405229:-|nuORF;REV__ENST00000512677.1_1_3:130399450-130405071:-|nuORF	68.484700416344	1.7418937515398478	4				NaN	NaN	0	NaN	7184	3146	10329
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10333	28.259	NaN	28237	30	0	3250.8	0.106				-1	 	0	76	403.56498069452766	1207.673112683783	3	403.56549072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7185	3146	10329
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10334	28.261	NaN	15428	30	0	1632.5	0.106	+			11019	FEKIHQETF	9	84	589.7950601978987	1177.5755674625973	2	589.7960815429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FEKIHQETF_	ENSG00000189091|ENST00000302516|SF3B3;nc|ENSG00000189091|Q15393-2|SF3B3	131.08727773389177	0.014661380957658584	4				NaN	NaN	0	NaN	7186	3146	10329
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10335	28.262	NaN	59043	30	0	8447.9	0.033				-1	 	0	88	444.2504151638847	886.4862773945695	2	444.2505798339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7187	3146	10329
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10336	28.263	NaN	9199.8	30	0	788.28	0.138				-1	 	0	71	454.246832581443	906.479112229686	2	454.2470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7188	3146	10329
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10354	28.302	NaN	101180	30	0	10041	0.182				-1	 	0	103	533.797614359475	1065.58067578575	2	533.7984619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7203	3149	10353
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10355	28.305	NaN	73015	30	0	9062.7	0.106				-1	 	0	97	576.258669661695	1150.5027863901898	2	576.2595825195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7204	3149	10353
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10356	28.307	NaN	36892	30	0	4106.6	0.106	+			21592	KPITTGGVTY	10	86	518.7869682856677	1035.5593836381354	2	518.7874755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KPITTGGVTY_	ENSG00000115641|ENST00000530340|FHL2	91.26522074875469	0.12383023862516404	4				NaN	NaN	0	NaN	7205	3149	10353
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10357	28.309	NaN	21649	30	0	2825	0.106	+			3616	ASVSTVLTSK	10	88	496.783971053002	991.553389172804	2	496.78460693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASVSTVLTSK_	ENSG00000188536|ENST00000251595|HBA2;ENSG00000206172|ENST00000320868|HBA1	154.0112374973812	0.007783311651969589	4				NaN	NaN	0	NaN	7206	3149	10353
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10358	28.311	NaN	13262	30	0	1542.7	0.106	+			27567	MPFKKGAAF	9	74	498.7697245991784	995.5248962651568	2	498.77032470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MPFKKGAAF_	ENSG00000171747|ENST00000307751|LGALS4	106.41520541750704	0.03265588207292361	4				NaN	NaN	0	NaN	7207	3149	10353
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10359	28.312	NaN	16401	30	0	1551.7	0.106	+			25561	LPWPPPAPV	9	90	487.27734518130643	972.5401374294129	2	487.2770080566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LPWPPPAPV_	LRRC14|p.S445P|1|0.14|ENSG00000160959|chr8:144521329-144521329|T/C|missense_variant	45.9519527083369	0.35044536499095585	4				NaN	NaN	0	NaN	7208	3149	10353
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10360	28.314	NaN	8066.5	30	0	382.36	0.036	+			2209	ALQEIYNQK	9	74	553.7951377290266	1105.575722524853	2	553.7958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ALQEIYNQK_	ENSG00000160216|ENST00000291572|AGPAT3;ENST00000484865.1_1_21:45391291-45401085:+|nuORF;nc|ENSG00000160216|Q9NRZ7-2|AGPAT3;nc|ENSG00000160216|Q9NRZ7-3|AGPAT3	82.7504851949679	0.08565546331141553	4				NaN	NaN	0	NaN	7209	3149	10353
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10373	28.342	NaN	58728	30	0	30876	0.214	+			15900	HAALETQTL	9	79	492.26097197549313	982.5073910177863	2	492.26123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HAALETQTL_	ENSG00000176945|ENST00000447234|MUC20;ENST00000457750.1_1_3:195341833-195346985:+|nuORF;nc|ENSG00000176945|Q8N307-3|MUC20	65.46538089061403	0.16805504838372562	4				NaN	NaN	0	NaN	7219	3152	10372
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10374	28.345	NaN	20134	30	0	7849.9	0.106	+			2341	AMSDEEHSYL	10	67	591.2427511453529	1180.4709493575058	2	591.2440185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AMSDEEHSYL_	tr|U7SMV2|U7SMV2_FUSNUMobA/MobLproteindomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01839PE=3SV=1	45.9519527083369	0.4943008177357963	4				NaN	NaN	0	NaN	7220	3152	10372
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10375	28.347	NaN	52648	30	0	5594.6	0.106	+			34631	RVQEAVESMVK	11	108	425.89501985920793	1274.6632301778238	3	425.89556884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RVQEAVESMVK_	ENSG00000035141|ENST00000430566|FAM136A;ENST00000460307.1_1_2:70528513-70529143:-|nuORF;ENST00000498665.1_1_2:70527944-70529143:-|nuORF;nc|ENSG00000035141|Q96C01|FAM136A	120.63048641472336	0.018968965619156397	4				NaN	NaN	0	NaN	7221	3152	10372
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10376	28.349	NaN	18343	30	0	3935	0.106	+			41675	SVSAVNLPK	9	83	457.76881380533086	913.5230746774618	2	457.76873779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVSAVNLPK_	ENSG00000116871|ENST00000474796|MAP7D1;MAP7D1|p.A565Rfs*10|1|0.29|ENSG00000116871|chr1:36178180-36178180|C/-|frameshift_variant;MAP7D1|p.C481Afs*94|2|0.29|ENSG00000116871|chr1:36177929-36177929|C/-|frameshift_variant;MAP7D1|p.R498Efs*77|2|0.32|ENSG00000116871|chr1:36177980-36177980|C/-|frameshift_variant;nc|ENSG00000116871|Q3KQU3-4|MAP7D1;nc|ENSG00000116871|Q3KQU3|MAP7D1	120.8684288430529	0.02067403653475984	4				NaN	NaN	0	NaN	7222	3152	10372
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10377	28.351	NaN	26549	30	0	6594.9	0.106	+			47962	VSMVALKFMT	10	98	563.8030594563702	1125.5915659795403	2	563.8042602539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSMVALKFMT_	SV2B|p.P298T|1|0.09|ENSG00000185518|chr15:91258528-91258528|C/A|missense_variant	39.252832667884924	0.5560298534376815	4				NaN	NaN	0	NaN	7223	3152	10372
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10378	28.353	NaN	26048	30	0	2018.8	0.034			+	6886	CLLVGNGLF	9	96	468.25510402673694	934.4956551202739	2	468.2554626464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_CLLVGNGLF_	REV__ENSG00000057252|ENST00000367619|SOAT1;REV__nc|ENSG00000057252|P35610-2|SOAT1;REV__nc|ENSG00000057252|P35610-3|SOAT1	40.5726180659479	0.4135428067754104	4				NaN	NaN	0	NaN	7224	3152	10372
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10379	28.353	NaN	9079.7	30	0	5351.6	0.138				-1	 	0	62	343.1983934912441	684.3822340492882	2	343.19891357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7225	3152	10372
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10397	28.392	NaN	28934	30	0	4986.9	0.214	+			17686	IEKSVSEAL	9	101	488.27185538483945	NaN	0	488.27142333984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IEKSVSEAL_	ENSG00000271601|ENST00000604000|LIX1L	66.96192283764107	0.11962625698446946	4				NaN	NaN	0	NaN	7240	3155	10396
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10398	28.396	NaN	67598	30	0	19333	0.106			+	10111	ESLSSDLVALS	11	100	374.1959973968819	1119.5661627908457	3	374.1963806152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ESLSSDLVALS_	REV__ENSG00000116455|ENST00000235090|WDR77;REV__nc|ENSG00000116455|Q9BQA1-2|WDR77	48.601550744091256	0.44024757269956427	4				NaN	NaN	0	NaN	7241	3155	10396
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10399	28.398	NaN	19357	30	0	7683.3	0.106			+	34851	RYSQDVTF	8	79	508.2453546828051	1014.4761564324102	2	508.24591064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RYSQDVTF_	REV__ENSG00000074276|ENST00000261944|CDHR2	53.351449002276354	0.5676011784961348	4				NaN	NaN	0	NaN	7242	3155	10396
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10400	28.399	NaN	36852	30	0	2970.1	0.106			+	-1	TCKQKMIQEL	10	94	647.8287100682686	1293.6428672033371	2	647.8297729492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_TC(Carbamidomethyl (C))KQKM(Oxidation (M))IQEL_	REV__ENSG00000136603|ENST00000259119|SKIL;REV__nc|ENSG00000136603|P12757-3|SKIL;REV__nc|ENSG00000136603|P12757-5|SKIL;REV__SKIL|p.C617Y|1|0.18|ENSG00000136603|chr3:170391214-170391214|G/A|missense_variant	117.81106730687013	0.030421278947300796	4				NaN	NaN	0	NaN	7243	3155	10396
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10401	28.401	NaN	7011.1	30	0	1448.4	0.106	+			20654	KGKNTPYINE	10	60	388.5398636620503	1162.597761586351	3	388.53997802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KGKNTPYINE_	tr|U7SXB5|U7SXB5_FUSNUDihydroorotaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=pyrCPE=3SV=1	40.77816245573522	0.5419747034533848	4				NaN	NaN	0	NaN	7244	3155	10396
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10402	28.403	NaN	11960	30	0	1605.4	0.034	+			24839	LIYGTPRAA	9	75	481.275506077348	960.536459221496	2	481.2761535644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LIYGTPRAA_	ENSG00000108946|ENST00000589228|PRKAR1A;ENSG00000188191|ENST00000537384|PRKAR1B;nc|ENSG00000108946|P10644-2|PRKAR1A	58.78195531508484	0.22376836668196862	4				NaN	NaN	0	NaN	7245	3155	10396
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10403	28.404	NaN	20423	30	0	7141.8	0.144	+			2553	AQARELMKML	10	80	397.5505916940383	1189.6299456823149	3	397.5511779785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AQARELMKML_	ENSG00000142207|ENST00000382751|URB1	61.691277971877994	0.35045824941635534	4				NaN	NaN	0	NaN	7246	3155	10396
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10421	28.443	NaN	67175	30	0	18545	0.194	+			44415	TSLPSAICK	9	98	488.7590540660979	975.5035551989959	2	488.7601013183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_TSLPSAIC(Carbamidomethyl (C))K_	ENSG00000177731|ENST00000327031|FLII;ENST00000578101.5_1_17:18148454-18160363:-|nuORF;FLII|p.K628Rfs*27|1|0.37|ENSG00000177731|chr17:18249178-18249178|T/-|frameshift_variant;FLII|p.S470Afs*32|1|0.36|ENSG00000177731|chr17:18251454-18251454|G/-|frameshift_variant;nc|ENSG00000177731|Q13045-2|FLII;nc|ENSG00000177731|Q13045-3|FLII	124.08010499294276	0.018729767491916592	4				NaN	NaN	0	NaN	7261	3158	10420
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10422	28.446	NaN	51166	30	0	5899.9	0.106	+			11024	FEKKYVATL	9	97	549.8131659967847	1097.6117790603694	2	549.8137817382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FEKKYVATL_	ENSG00000132341|ENST00000543796|RAN	125.68205650279488	0.017759985800556374	4				NaN	NaN	0	NaN	7262	3158	10420
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10423	28.448	NaN	25313	30	0	6015.6	0.106	+			44505	TSSRVDHVM	9	90	524.2477039032184	1046.4808548732367	2	524.2489013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_TSSRVDHVM(Oxidation (M))_	ENSG00000109674|ENST00000264596|NEIL3	51.33545320467046	0.2872990594074956	4				NaN	NaN	0	NaN	7263	3158	10420
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10424	28.45	NaN	18744	30	0	4553.9	0.106			+	50987	YINLKYATL	9	88	366.877571572848	1097.610885318744	3	366.8779602050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YINLKYATL_	REV__ENST00000523153.2_1_8:54885384-54885555:+|nuORF	49.44154591367651	0.3095138337212152	4				NaN	NaN	0	NaN	7264	3158	10420
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10425	28.452	NaN	9610	30	0	1312.5	0.106			+	9382	EKDWVTKEE	9	82	582.2823843582133	1162.5502157832266	2	582.283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EKDWVTKEE_	REV__TXLNA|p.R453W|1|0.08|ENSG00000084652|chr1:32194911-32194911|C/T|missense_variant	95.81516180277367	0.04847050768394289	4				NaN	NaN	0	NaN	7265	3158	10420
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10426	28.454	NaN	7457.9	30	0	958.87	0.106			+	8130	DYVFYTEDKF	10	78	663.7982040777322	1325.5818552222643	2	663.7996826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DYVFYTEDKF_	REV__ENSG00000166479|ENST00000299608|TMX3;REV__ENST00000566887.1_1_18:66356235-66358580:-|nuORF;REV__ENST00000569053.5_1_18:66357168-66367709:-|nuORF	37.81151784470057	0.569310847604193	4				NaN	NaN	0	NaN	7266	3158	10420
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10427	28.455	NaN	20148	30	0	12745	0.034			+	6121	AVPGVRKLS	9	67	463.79216989351875	925.5697868538375	2	463.7925109863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AVPGVRKLS_	REV__ENSG00000105655|ENST00000338128|ISYNA1;REV__ENST00000577820.5_1_19:18545725-18548921:-|nuORF;REV__ENST00000582287.6_1_19:18545725-18546537:-|nuORF;REV__nc|ENSG00000105655|Q9NPH2-2|ISYNA1;REV__nc|ENSG00000105655|Q9NPH2-3|ISYNA1	37.15910966729921	0.4535818937225704	4				NaN	NaN	0	NaN	7267	3158	10420
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10445	28.492	NaN	74265	30	0	20761	0.214	+			38802	SSMTAVLQK	9	103	482.7596821435112	963.5048113538224	2	482.7601318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSMTAVLQK_	ENST00000470658.1_1_21:44293721-44296875:-|nuORF	185.54966270084765	0.0007389233275946833	4				NaN	NaN	0	NaN	7282	3161	10444
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10446	28.496	NaN	44836	30	0	5751.3	0.106	+			10835	FASHVSPEV	9	94	486.7425349372824	971.4705169413648	2	486.74273681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FASHVSPEV_	ARFGAP3|p.G224Afs*32|1|0.31|ENSG00000242247|chr22:42823659-42823659|T/-|frameshift_variant;ENSG00000242247|ENST00000263245|ARFGAP3;nc|ENSG00000242247|Q9NP61-2|ARFGAP3	102.7733458925114	0.03637199559902695	4				NaN	NaN	0	NaN	7283	3161	10444
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10447	28.498	NaN	28421	30	0	5086.2	0.106	+			42388	TAIREAQTF	9	102	518.7739946288074	1035.5334363244147	2	518.7749633789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TAIREAQTF_	BAZ1B|p.A1298Cfs*10|1|0.16|ENSG00000009954|chr7:73444083-73444084|-/G|frameshift_variant;ENSG00000009954|ENST00000339594|BAZ1B;nc|ENSG00000009954|Q9UIG0-2|BAZ1B	76.16968421966216	0.11411088698345859	4				NaN	NaN	0	NaN	7284	3161	10444
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10448	28.5	NaN	17787	30	0	1734.8	0.106	+			13013	GEVEKYQQL	9	74	547.2797241600098	1092.5448953868195	2	547.2802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEVEKYQQL_	ENSG00000204220|ENST00000374606|PFDN6;ENST00000395134.3_1_6:33257633-33258228:+|nuORF;ENST00000491382.1_1_6:33257633-33258228:+|nuORF	127.46168284122857	0.016682644177004526	4				NaN	NaN	0	NaN	7285	3161	10444
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10449	28.502	NaN	25608	30	0	5366.2	0.106	+			25456	LPQHQVPAY	9	82	526.7794203858397	1051.5442878384792	2	526.7802124023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LPQHQVPAY_	ENSG00000130522|ENST00000252818|JUND	76.84663266511073	0.11118375776443899	4				NaN	NaN	0	NaN	7286	3161	10444
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10450	28.503	NaN	24189	30	0	7588.6	0.034	+			13211	GIFIFNVV	8	84	454.7641756611755	907.513798389151	2	454.76348876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GIFIFNVV_	ENSG00000130821|ENST00000253122|SLC6A8;ENST00000431994.5_1_16:32890029-32891910:-|nuORF;ENST00000485324.1_1_X:152959908-152960666:+|nuORF;nc|ENSG00000130821|P48029-2|SLC6A8;nc|ENSG00000130821|P48029-3|SLC6A8;nc|ENSG00000130821|P48029-4|SLC6A8	54.76467175910256	0.5536104764165384	4				NaN	NaN	0	NaN	7287	3161	10444
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10451	28.504	NaN	5071.5	30	0	776.34	0.137	+			23512	LAHAGVAL	8	59	376.22629399599157	750.4380350587832	2	376.2265930175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LAHAGVAL_	ENSG00000006062|ENST00000344686|MAP3K14	67.3271909547111	0.42924334279516513	4				NaN	NaN	0	NaN	7288	3161	10444
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10469	28.543	NaN	290980	30	0	35755	0.159	+			3798	ATAGIIGVNR	10	99	486.2847840016881	970.5550150701762	2	486.2852783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATAGIIGVNR_	CLTC-CEP95|1|fusion;CLTC|p.A1374*|1|0.05|ENSG00000141367|chr17:59683464-59683465|-/TA|frameshift_variant;CLTC|p.D632Yfs*7|1|0.15|ENSG00000141367|chr17:59666589-59666590|-/TTACA|frameshift_variant;ENSG00000141367|ENST00000269122|CLTC;ENST00000472129.3_1_17:57725612-57733400:+|nuORF;nc|ENSG00000141367|Q00610-2|CLTC	159.27591364854348	0.006848530601684873	4				NaN	NaN	0	NaN	7303	3164	10468
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10470	28.545	NaN	101560	30	0	14575	0.106	+			36059	SEITTKDL	8	111	453.7422091197622	905.4698653063244	2	453.7425842285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEITTKDL_	ENSG00000187514|ENST00000409115|PTMA;ENST00000468027.5_1_2:232573416-232577283:+|nuORF;nc|ENSG00000187514|P06454|PTMA	148.98678547993487	0.23009633913008076	4				NaN	NaN	0	NaN	7304	3164	10468
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10471	28.547	NaN	59856	30	0	6196.3	0.106	+			33079	REKLQEEML	9	97	588.3077754749214	1174.6009980166427	2	588.3087158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_REKLQEEML_	ENSG00000026025|ENST00000544301|VIM;ENST00000485947.1_1_10:17271421-17272784:+|nuORF	159.33581866081465	0.004693099277440949	4				NaN	NaN	0	NaN	7305	3164	10468
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10472	28.549	NaN	31424	30	0	2804.4	0.106	+			43039	TELAMRQSV	9	91	517.7691378739439	NaN	0	517.769287109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TELAMRQSV_	CON__P05784;ENSG00000111057|ENST00000388835|KRT18;ENST00000396959.2_1_3:12829511-12830132:-|nuORF;ENST00000424695.1_1_1:238654935-238655424:+|nuORF;ENST00000427733.1_1_13:90882929-90883235:+|nuORF;ENST00000549078.5_1_12:53344429-53346127:+|nuORF	172.24860141594272	0.009104089201406795	4				NaN	NaN	0	NaN	7306	3164	10468
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10473	28.551	NaN	13433	30	0	6660	0.106				-1	 	0	74	493.77902784663746	985.543502760075	2	493.7795715332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7307	3164	10468
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10474	28.553	NaN	14068	30	0	5220.2	0.106			+	6268	AVSLASRSRK	10	66	358.88550241701887	NaN	0	358.8855895996094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AVSLASRSRK_	REV__nc|ENSG00000065989|P27815-7|PDE4A	29.170058357718403	0.40439580130713204	4				NaN	NaN	0	NaN	7308	3164	10468
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10475	28.554	NaN	10429	30	0	886.5	0.036	+			28700	NNEKLEGDAA	10	69	530.7489310087781	1059.483309084356	2	530.7499389648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NNEKLEGDAA_	ENST00000379452.3_1_3:32795167-32795302:+|nuORF	70.8162118820467	0.27065172005956	4				NaN	NaN	0	NaN	7309	3164	10468
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10493	28.591	NaN	25627	30	0	2797.5	0.214	+			3257	ASLGLKFNK	9	88	489.2923324510994	976.5701119689988	2	489.29254150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASLGLKFNK_	ENSG00000247077|ENST00000498926|PGAM5;nc|ENSG00000247077|Q96HS1-2|PGAM5	65.46538089061403	0.16805504838372562	4				NaN	NaN	0	NaN	7324	3167	10492
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10494	28.594	NaN	16756	30	0	1844	0.106			+	10401	EVEQEHLL	8	89	498.7526276111287	995.4907022890574	2	498.7528076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EVEQEHLL_	REV__ENSG00000120370|ENST00000367763|GORAB	71.29570347882199	0.39610197767395533	4				NaN	NaN	0	NaN	7325	3167	10492
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10495	28.596	NaN	24669	30	0	9216.7	0.106	+			49491	VVYTSHLQLK	10	63	396.56424110482436	1186.6708939146731	3	396.8984069824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVYTSHLQLK_	ENSG00000015568|ENST00000016946|RGPD5;ENSG00000153165|ENST00000409886|RGPD3;ENSG00000153201|ENST00000283195|RANBP2;ENSG00000169629|ENST00000302558|RGPD8;ENSG00000183054|ENST00000329516|RGPD6;ENSG00000185304|ENST00000398146|RGPD2;ENSG00000187627|ENST00000641458|RGPD1;ENSG00000196862|ENST00000408999|RGPD4;ENST00000522286.5_1_2:113158797-113161561:-|nuORF;nc|ENSG00000183054|Q99666-2|RGPD5;nc|ENSG00000187627|P0DJD0|RGPD1;RANBP2|p.A864Lfs*3|1|0.3|ENSG00000153201|chr2:108758533-108758533|G/-|frameshift_variant;RANBP2|p.C2737Vfs*35|1|0.18|ENSG00000153201|chr2:108772957-108772957|T/-|frameshift_variant;RANBP2|p.F3068Lfs*10|1|0.06|ENSG00000153201|chr2:108782692-108782692|T/-|frameshift_variant;RANBP2|p.H3114Sfs*18|1|0.33|ENSG00000153201|chr2:108782827-108782828|-/T|frameshift_variant;RANBP2|p.K1989Nfs*9|1|0.05|ENSG00000153201|chr2:108766505-108766506|-/TATCCTG|frameshift_variant;RANBP2|p.K2576Nfs*63|2|0.22|ENSG00000153201|chr2:108768262-108768262|A/-|frameshift_variant;RANBP2|p.S1486Rfs*51|1|0.05|ENSG00000153201|chr2:108764996-108764997|-/ATTTTGTATTC|frameshift_variant;RGPD2|p.F1350Lfs*25|1|0.25|ENSG00000185304|chr2:87782974-87782974|A/-|frameshift_variant;RGPD3|p.V1441*|1|0.45|ENSG00000153165|chr2:106423647-106423647|T/-|frameshift_variant;RGPD4|p.K568Nfs*33|1|0.14|ENSG00000196862|chr2:107859787-107859787|A/-|frameshift_variant	31.634271133179894	0.6214930414500597	4				NaN	NaN	0	NaN	7326	3167	10492
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10496	28.598	NaN	9928.2	30	0	1212.4	0.106			+	37166	SIVSTFHTI	9	77	502.77361112855846	1003.5326693239169	2	502.77606201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SIVSTFHTI_	REV__ENST00000251047.5_1_18:56996763-56996880:-|nuORF	69.6276240434122	0.14239879520340665	4				NaN	NaN	0	NaN	7327	3167	10492
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10497	28.6	NaN	7580.5	30	0	839.96	0.106	+			36121	SEKNPSEVTL	10	73	552.2828941596317	1102.5512353860634	2	552.2835693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SEKNPSEVTL_	ENSG00000080200|ENST00000389622|CRYBG3	77.53327743719008	0.21577387331637743	4				NaN	NaN	0	NaN	7328	3167	10492
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10498	28.602	NaN	10861	30	0	1040.8	0.034	+			1263	AESDKPVVI	9	91	479.2660641278305	956.517575322461	2	479.26654052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AESDKPVVI_	ENSG00000112297|ENST00000633556|CRYBG1;nc|ENSG00000112297|Q9Y4K1-1|CRYBG1	67.49366992349736	0.1516260258713357	4				NaN	NaN	0	NaN	7329	3167	10492
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10499	28.602	NaN	6335.6	30	0	630.39	0.143	+			33589	RLMEIYQEK	9	80	605.3185361160087	1208.6225192988172	2	605.3184814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RLMEIYQEK_	ENSG00000089154|ENST00000300648|GCN1;ENST00000548132.1_1_12:120592933-120593466:-|nuORF	74.1650062923329	0.12277912660386392	4				NaN	NaN	0	NaN	7330	3167	10492
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10516	28.638	NaN	333220	30	0	61199	0.122	+			12306	GDAGLGKLIK	10	75	486.2973773459277	970.5802017586554	2	486.2972717285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GDAGLGKLIK_	ENSG00000163565|ENST00000295809|IFI16;ENST00000493884.5_1_1:158984458-159022017:+|nuORF;IFI16|p.I227Nfs*42|1|0.46|ENSG00000163565|chr1:159018351-159018352|-/A|frameshift_variant;nc|ENSG00000163565|Q16666-2|IFI16;nc|ENSG00000163565|Q16666-3|IFI16;nc|ENSG00000163565|Q16666-6|IFI16	145.15565482312357	0.00937948146126426	4				NaN	NaN	0	NaN	7344	3170	10515
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10517	28.64	NaN	52993	30	0	10750	0.106	+			49205	VVMVNQGLTK	10	80	544.8098661468943	1087.6051793605884	2	544.8111572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVMVNQGLTK_	ENSG00000134057|ENST00000256442|CCNB1	167.93327368760816	0.004342583126626421	4				NaN	NaN	0	NaN	7345	3170	10515
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10518	28.642	NaN	28230	30	0	9148.1	0.106	+			7300	DASGAKLDY	9	88	470.22435215177615	938.4341513703523	2	470.224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DASGAKLDY_	BZW1|p.N285Tfs*11|2|0.26|ENSG00000082153|chr2:200818782-200818782|A/-|frameshift_variant;BZW1|p.N286*|1|0.04|ENSG00000082153|chr2:200818790-200818791|-/T|frameshift_variant;BZW1|p.S325Rfs*19|1|0.04|ENSG00000082153|chr2:200819989-200819990|-/ACAATATAGAA|frameshift_variant;ENSG00000082153|ENST00000409600|BZW1;ENST00000464483.1_1_2:201677931-201680272:+|nuORF;nc|ENSG00000082153|Q7L1Q6-2|BZW1;nc|ENSG00000082153|Q7L1Q6-3|BZW1;nc|ENSG00000082153|Q7L1Q6-4|BZW1	163.1509380574825	0.003936019289634439	4				NaN	NaN	0	NaN	7346	3170	10515
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10519	28.644	NaN	25776	30	0	3905.3	0.106			+	29955	PNGRLGPP	8	84	404.2269032038284	806.4392534744568	2	404.2273864746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PNGRLGPP_	REV__COL5A2|p.D946N|1|0.08|ENSG00000204262|chr2:189051415-189051415|C/T|missense_variant	37.15910966729921	0.6739408393984688	4				NaN	NaN	0	NaN	7347	3170	10515
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10520	28.646	NaN	29891	30	0	2723.8	0.106	+			42750	TDLYTHQV	8	98	488.7401553571537	975.4657577811074	2	488.740478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TDLYTHQV_	nc|ENSG00000293504|Q99463|NPY6R	44.116797842482775	0.6307669463330267	4				NaN	NaN	0	NaN	7348	3170	10515
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10521	28.648	NaN	37610	30	0	23961	0.106			+	12384	GDWLQRVVP	9	69	357.1974392214227	1068.5704882644682	3	357.1979064941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GDWLQRVVP_	REV__ENSG00000104951|ENST00000391826|IL4I1;REV__nc|ENSG00000104951|Q96RQ9-2|IL4I1	37.81151784470057	0.4459294069877048	4				NaN	NaN	0	NaN	7349	3170	10515
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10522	28.649	NaN	16793	30	0	3079.9	0.035			+	17076	HRLWSMAL	8	79	507.27187105536524	1012.5291891775305	2	507.2727355957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HRLWSMAL_	REV__ENST00000337540.11_1_10:99520017-99520263:+|nuORF	58.78195531508484	0.5138399468736706	4				NaN	NaN	0	NaN	7350	3170	10515
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10523	28.65	NaN	73235	30	0	13882	0.141	+			5702	AVFDGAQVTSK	11	106	561.7927575842807	1121.5709622353613	2	561.7940673828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_AVFDGAQVTSK_	ENSG00000175274|ENST00000525680|TP53I11	188.9123650225555	2.265499584896125E-06	4				NaN	NaN	0	NaN	7351	3170	10515
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10541	28.689	NaN	46808	30	0	7680.2	0.215			+	7047	CSYQGALSR	9	98	492.7315094427906	983.4484659523812	2	492.7322082519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CSYQGALSR_	REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-13|TTN;REV__nc|ENSG00000155657|Q8WZ42-2|TTN;REV__nc|ENSG00000155657|Q8WZ42-4|TTN;REV__nc|ENSG00000155657|Q8WZ42-5|TTN;REV__nc|ENSG00000155657|Q8WZ42-7|TTN;REV__nc|ENSG00000155657|Q8WZ42-8|TTN;REV__nc|ENSG00000155657|Q8WZ42|TTN;REV__TTN|p.A12650Gfs*4|1|0.4|ENSG00000155657|chr2:178633489-178633490|-/T|frameshift_variant;REV__TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;REV__TTN|p.D20259Rfs*40|1|0.44|ENSG00000155657|chr2:178583105-178583106|-/T|frameshift_variant;REV__TTN|p.D21555Ifs*6|1|0.33|ENSG00000155657|chr2:178576659-178576659|G/-|frameshift_variant;REV__TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;REV__TTN|p.E15132Sfs*22|1|0.27|ENSG00000155657|chr2:178612094-178612094|C/-|frameshift_variant;REV__TTN|p.E20392Dfs*6|1|0.04|ENSG00000155657|chr2:178582357-178582358|-/TTTAAAATTA|frameshift_variant;REV__TTN|p.E20392Kfs*4|1|0.02|ENSG00000155657|chr2:178582359-178582360|-/TTTT|frameshift_variant;REV__TTN|p.E9224Gfs*8|1|0.04|ENSG00000155657|chr2:178709697-178709698|-/TCTTATGATATCTTGAC|frameshift_variant;REV__TTN|p.F18705Lfs*8|1|0.37|ENSG00000155657|chr2:178590687-178590687|A/-|frameshift_variant;REV__TTN|p.G12742Vfs*2|1|0.05|ENSG00000155657|chr2:178632983-178632983|C/-|frameshift_variant;REV__TTN|p.G14712Dfs*11|1|0.37|ENSG00000155657|chr2:178614341-178614341|G/-|frameshift_variant;REV__TTN|p.G19920Afs*12|1|0.42|ENSG00000155657|chr2:178584961-178584961|G/-|frameshift_variant;REV__TTN|p.G22029Efs*22|2|0.13|ENSG00000155657|chr2:178575125-178575125|T/-|frameshift_variant;REV__TTN|p.I10495Nfs*4|1|0.37|ENSG00000155657|chr2:178685288-178685289|-/T|frameshift_variant;REV__TTN|p.I24998Nfs*2|1|0.35|ENSG00000155657|chr2:178566216-178566217|-/T|frameshift_variant;REV__TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;REV__TTN|p.I9225Cfs*34|1|0.06|ENSG00000155657|chr2:178709695-178709696|-/ATATCCATGAGCA|frameshift_variant;REV__TTN|p.K10923Rfs*104|2|0.23|ENSG00000155657|chr2:178679362-178679362|T/-|frameshift_variant;REV__TTN|p.K11381Nfs*25|1|0.07|ENSG00000155657|chr2:178671133-178671133|T/-|frameshift_variant;REV__TTN|p.K11556Sfs*15|1|0.39|ENSG00000155657|chr2:178652287-178652287|T/-|frameshift_variant;REV__TTN|p.K14271Qfs*5|1|0.02|ENSG00000155657|chr2:178617351-178617352|-/G|frameshift_variant;REV__TTN|p.K26626Nfs*34|1|0.34|ENSG00000155657|chr2:178561331-178561331|T/-|frameshift_variant;REV__TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;REV__TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;REV__TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant;REV__TTN|p.N13487Tfs*49|1|0.34|ENSG00000155657|chr2:178621335-178621335|T/-|frameshift_variant;REV__TTN|p.N15496Ifs*16|1|0.09|ENSG00000155657|chr2:178610116-178610116|T/-|frameshift_variant;REV__TTN|p.P16126Rfs*3|1|0.25|ENSG00000155657|chr2:178607301-178607302|TG/-|frameshift_variant;REV__TTN|p.P22810Hfs*10|1|0.03|ENSG00000155657|chr2:178572780-178572781|-/AAAT|frameshift_variant;REV__TTN|p.V10632Yfs*16|1|0.16|ENSG00000155657|chr2:178683254-178683254|T/-|frameshift_variant;REV__TTN|p.V11008Sfs*13|1|0.33|ENSG00000155657|chr2:178678146-178678147|-/T|frameshift_variant;REV__TTN|p.V11345Ffs*4|1|0.4|ENSG00000155657|chr2:178672044-178672044|T/-|frameshift_variant;REV__TTN|p.V13823*|1|0.28|ENSG00000155657|chr2:178620027-178620027|C/-|frameshift_variant;REV__TTN|p.V22573Cfs*4|2|0.31|ENSG00000155657|chr2:178573492-178573492|C/-|frameshift_variant;REV__TTN|p.V27442Cfs*4|1|0.05|ENSG00000155657|chr2:178558107-178558108|-/A|frameshift_variant	107.00750918261382	0.032051501805654005	4				NaN	NaN	0	NaN	7366	3173	10540
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10542	28.692	NaN	9232.6	30	0	3749.8	0.106	+			37610	SLPSRAAAL	9	65	443.2611013038866	884.5076496745733	2	443.2613830566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLPSRAAAL_	ENSG00000105397|ENST00000525621|TYK2	69.6276240434122	0.14239879520340665	4				NaN	NaN	0	NaN	7367	3173	10540
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10543	28.694	NaN	21649	30	0	1363	0.106				-1	MNPQNGLKI	9	95	515.7711413872134	NaN	0	515.772216796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))NPQNGLKI_	ENSG00000164332|ENST00000296786|UBLCP1;ENST00000519276.1_1_5:158701561-158711936:+|nuORF	49.44154591367651	0.21054156626303966	4				NaN	NaN	0	NaN	7368	3173	10540
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10544	28.696	NaN	19303	30	0	1872.7	0.106			+	24871	LKFDLSQPG	9	90	502.77361112855846	1003.5326693239169	2	503.27435302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LKFDLSQPG_	REV__tr|U7T3P5|U7T3P5_FUSNUPhospho-2-dehydro-3-deoxyheptonatealdolaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00192PE=4SV=1	72.87924865735499	0.12833875048249987	4				NaN	NaN	0	NaN	7369	3173	10540
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10545	28.698	NaN	4732.1	30	0	1516.2	0.106				-1	 	0	53	329.846332648679	986.5171685462369	3	329.8468933105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7370	3173	10540
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10546	28.7	NaN	11791	30	0	2642	0.033			+	27956	MVIVLARG	8	85	429.76474648585526	857.5149400385105	2	429.765380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MVIVLARG_	REV__nc|ENSG00000070087|P35080-2|PFN2	52.29916861842294	0.578018602984656	4				NaN	NaN	0	NaN	7371	3173	10540
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10547	28.7	NaN	7062	30	0	1023.9	0.14				-1	 	0	80	498.7697245991784	995.5248962651568	2	498.7709655761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7372	3173	10540
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10565	28.739	NaN	26105	30	0	10565	0.214	+			45977	VATEKAVEL	9	83	480.2732273980873	958.5319018629746	2	480.27374267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VATEKAVEL_	ENSG00000163931|ENST00000462138|TKT;ENST00000460243.1_1_3:53262881-53263452:-|nuORF;ENST00000460343.5_1_3:53261754-53265639:-|nuORF;ENST00000461139.5_1_3:53259774-53265639:-|nuORF;ENST00000469678.1_1_3:53259917-53265542:-|nuORF;nc|ENSG00000163931|P29401-2|TKT	93.5975768576971	0.05472259948179787	4				NaN	NaN	0	NaN	7387	3176	10564
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10566	28.742	NaN	42329	30	0	4521.6	0.106				-1	VSQLLMCR	8	91	503.7615495605237	1005.5085461878474	2	503.7621765136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_VSQLLMC(Carbamidomethyl (C))R_	ENST00000472364.1_1_21:47974114-47978399:+|nuORF;ENST00000481883.1_1_21:47977249-47978399:+|nuORF	60.97194046774394	0.49215940876911696	4				NaN	NaN	0	NaN	7388	3176	10564
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10567	28.745	NaN	20418	30	0	2653.6	0.106	+			49551	VYASDRATF	9	88	515.2534825922346	NaN	0	515.2537841796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYASDRATF_	ENSG00000198721|ENST00000380118|ECI2;ENST00000380120.6_1_6:4116110-4130812:-|nuORF;ENST00000464057.5_1_6:4116110-4125894:-|nuORF;ENST00000464583.5_1_6:4119386-4125894:-|nuORF;ENST00000496241.6_1_6:4116110-4130478:-|nuORF;nc|ENSG00000198721|O75521-2|ECI2	63.53385203322761	0.134247007536971	4				NaN	NaN	0	NaN	7389	3176	10564
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10568	28.746	NaN	18277	30	0	2702	0.106	+			8860	EERAEVSEL	9	96	531.2586488071964	1060.5027446811928	2	531.259521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EERAEVSEL_	ENSG00000167460|ENST00000643579|TPM4;ENST00000587201.5_1_19:16187360-16198908:+|nuORF;nc|ENSG00000167460|P67936-2|TPM4	131.03138772384656	0.014687601201650916	4				NaN	NaN	0	NaN	7390	3176	10564
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10569	28.748	NaN	9790.9	30	0	1344.6	0.106			+	24951	LLAGPHILS	9	73	460.78156501510927	919.5485770970186	2	460.78155517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LLAGPHILS_	REV__ENSG00000166783|ENST00000396368|MARF1;REV__ENST00000548216.2_1_16:15729470-15733102:-|nuORF;REV__nc|ENSG00000166783|Q9Y4F3-3|MARF1;REV__nc|ENSG00000166783|Q9Y4F3-4|MARF1;REV__nc|ENSG00000166783|Q9Y4F3-5|MARF1;REV__nc|ENSG00000166783|Q9Y4F3-6|MARF1	40.5726180659479	0.4135428067754104	4				NaN	NaN	0	NaN	7391	3176	10564
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10570	28.75	NaN	9726.5	30	0	1010.9	0.034	+			3225	ASLADIMAK	9	75	468.24636161188903	934.4781702905781	2	468.2466735839844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_ASLADIM(Oxidation (M))AK_	ENSG00000114391|ENST00000394077|RPL24;ENST00000446071.1_1_9:72832122-72832404:+|nuORF	70.8162118820467	0.13725933411854815	4				NaN	NaN	0	NaN	7392	3176	10564
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10571	28.75	NaN	9357.5	30	0	1150.9	0.138	+			45677	VAAAHSVVL	9	67	433.7576969756161	865.5008410180322	2	433.7581787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VAAAHSVVL_	ENSG00000131558|ENST00000253861|EXOC4;ENST00000462055.5_1_7:132937857-133164897:+|nuORF;ENST00000486013.5_1_7:132937857-133314895:+|nuORF;EXOC4|p.N439Ifs*15|1|0.39|ENSG00000131558|chr7:133475456-133475456|A/-|frameshift_variant;EXOC4|p.N439Kfs*28|1|0.17|ENSG00000131558|chr7:133475455-133475456|-/A|frameshift_variant;nc|ENSG00000131558|Q96A65-2|EXOC4	68.484700416344	0.1473408039581241	4				NaN	NaN	0	NaN	7393	3176	10564
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10589	28.788	NaN	59218	30	0	6169.6	0.215	+			25319	LPAREATQF	9	99	516.7776830509332	1031.5408131686663	2	516.7772827148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LPAREATQF_	ENSG00000183087|ENST00000327773|GAS6;ENST00000476291.1_1_13:114550749-114566917:-|nuORF;GAS6|p.G150Afs*49|1|0.17|ENSG00000183087|chr13:113839745-113839745|C/-|frameshift_variant;GAS6|p.N106Kfs*13|1|0.39|ENSG00000183087|chr13:113846552-113846553|-/T|frameshift_variant;GAS6|p.R151Pfs*27|1|0.41|ENSG00000183087|chr13:113839744-113839745|-/C|frameshift_variant;nc|ENSG00000183087|Q14393-1|GAS6	90.60085204095205	0.06317133949006545	4				NaN	NaN	0	NaN	7408	3179	10588
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10590	28.792	NaN	28612	30	0	5609	0.106	+			4618	ATLNSIVAK	9	101	458.77606814783996	915.53758336248	2	458.7763977050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATLNSIVAK_	ENSG00000007944|ENST00000356840|MYLIP;MYLIP|p.K199Rfs*26|1|0.07|ENSG00000007944|chr6:16143150-16143151|-/GAATT|frameshift_variant;MYLIP|p.R317Kfs*8|1|0.09|ENSG00000007944|chr6:16145014-16145015|-/A|frameshift_variant	120.30596017624542	0.02101454110788768	4				NaN	NaN	0	NaN	7409	3179	10588
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10591	28.794	NaN	31876	30	0	5568.3	0.106	+			7422	DERANLPEI	9	97	528.7694431169069	1055.5243333006138	2	528.769775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DERANLPEI_	ENST00000587908.1_1_19:56832840-56833431:-|nuORF	96.19043198914106	0.047412499214244314	4				NaN	NaN	0	NaN	7410	3179	10588
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10592	28.796	NaN	31958	30	0	10538	0.106				-1	 	0	92	488.76855245286845	975.5225519725369	2	488.7688293457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7411	3179	10588
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10593	28.798	NaN	17443	30	0	1395.6	0.106	+			732	AEAYLGKTV	9	97	476.2607730841555	950.506993235111	2	476.7637634277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEAYLGKTV_	ENSG00000109971|ENST00000534624|HSPA8;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;ENST00000456928.2_1_12:4206979-4207195:+|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;HSPA8|p.K569Dfs*6|1|0.3|ENSG00000109971|chr11:123058302-123058303|TC/-|frameshift_variant;nc|ENSG00000109971|P11142-2|HSPA8	76.16968421966216	0.11411088698345859	4				NaN	NaN	0	NaN	7412	3179	10588
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10594	28.799	NaN	9331.7	30	0	1295.1	0.037			+	23948	LDRLFAGVDV	10	80	368.8723319332787	1103.595166400036	3	368.8737487792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LDRLFAGVDV_	REV__ENSG00000102901|ENST00000562787|CENPT;REV__ENST00000562513.6_1_16:67862078-67865741:-|nuORF;REV__ENST00000562947.5_1_16:67864542-67866179:-|nuORF;REV__ENST00000565157.5_1_16:67864257-67867798:-|nuORF;REV__ENST00000569862.5_1_16:67865068-67866179:-|nuORF;REV__nc|ENSG00000102901|Q96BT3-2|CENPT	61.691277971877994	0.35045824941635534	4				NaN	NaN	0	NaN	7413	3179	10588
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10595	28.8	NaN	20759	30	0	6678.7	0.143	+			31001	QESEARIQQL	10	86	601.3118114286133	1200.6090699240265	2	601.312255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QESEARIQQL_	ENSG00000100242|ENST00000689035|SUN2;ENST00000469086.5_1_22:39136824-39138467:-|nuORF;ENST00000477262.5_1_22:39135390-39138407:-|nuORF;nc|ENSG00000100242|Q9UH99-2|SUN2;nc|ENSG00000100242|Q9UH99-3|SUN2	154.1183686248401	0.007764289751102599	4				NaN	NaN	0	NaN	7414	3179	10588
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10613	28.839	NaN	35491	30	0	5757.5	0.214	+			733	AEAYLGKTV	9	82	476.2607730841555	950.506993235111	2	476.2607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEAYLGKTV_	ENSG00000109971|ENST00000534624|HSPA8;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;ENST00000456928.2_1_12:4206979-4207195:+|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;HSPA8|p.K569Dfs*6|1|0.3|ENSG00000109971|chr11:123058302-123058303|TC/-|frameshift_variant;nc|ENSG00000109971|P11142-2|HSPA8	99.01295224348159	0.040209060045561164	4				NaN	NaN	0	NaN	7429	3182	10612
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10614	28.843	NaN	20082	30	0	8073.9	0.106			+	754	AEEAPTHTL	9	79	484.73727676429326	967.4600005953865	2	484.7375793457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEEAPTHTL_	REV__ENST00000572440.1_1_17:44055640-44055811:+|nuORF;REV__ENST00000576518.1_1_17:44055640-44101534:+|nuORF	55.50420428727701	0.2510918378945873	4				NaN	NaN	0	NaN	7430	3182	10612
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10615	28.845	NaN	12715	30	0	1469.9	0.106	+			16938	HPNGNITEL	9	84	497.7514271743757	993.4883014155514	2	497.7515869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HPNGNITEL_	ENSG00000197157|ENST00000354725|SND1;GAS2L3-SND1|1|fusion;SND1|p.A514Qfs*156|1|0.37|ENSG00000197157|chr7:127929195-127929195|A/-|frameshift_variant	49.44154591367651	0.3095138337212152	4				NaN	NaN	0	NaN	7431	3182	10612
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10616	28.847	NaN	16225	30	0	2821	0.106	+			47886	VSLGTPIMK	9	78	481.2723321481962	NaN	0	481.27239990234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_VSLGTPIM(Oxidation (M))K_	ECT2|p.K832Rfs*25|1|0.1|ENSG00000114346|chr3:172815693-172815693|A/-|frameshift_variant;ENSG00000114346|ENST00000392692|ECT2;nc|ENSG00000114346|Q9H8V3-2|ECT2;nc|ENSG00000114346|Q9H8V3-3|ECT2;nc|ENSG00000114346|Q9H8V3-4|ECT2	95.81516180277367	0.029873745472008544	4				NaN	NaN	0	NaN	7432	3182	10612
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10617	28.849	NaN	8919.5	30	0	966.96	0.106	+			33695	RPDEKAIMTY	10	80	612.307800635559	1222.601048337918	2	612.3082275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RPDEKAIMTY_	ENSG00000072110|ENST00000394419|ACTN1;ENSG00000130402|ENST00000252699|ACTN4;ENST00000554508.5_1_14:69367621-69387744:-|nuORF;ENST00000588618.5_1_19:39138385-39212431:+|nuORF;nc|ENSG00000072110|P12814-2|ACTN1;nc|ENSG00000072110|P12814-4|ACTN1;nc|ENSG00000072110|P12814|ACTN1	102.0615471778698	0.07157459376830236	4				NaN	NaN	0	NaN	7433	3182	10612
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10618	28.85	NaN	7731.3	30	0	1625.9	0.034	+			34082	RSPPPGMGL	9	62	456.2410129515761	910.4674729699523	2	456.2418518066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RSPPPGMGL_	ENSG00000116560|ENST00000357214|SFPQ;nc|ENSG00000116560|P23246-2|SFPQ	56.72105179125745	0.24094814563026265	4				NaN	NaN	0	NaN	7434	3182	10612
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10619	28.851	NaN	6126	30	0	1257.4	0.139			+	25747	LSAALLDQP	9	63	464.2604453470424	926.5063377608848	2	464.260986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSAALLDQP_	REV__ENSG00000134398|ENST00000256797|ERN2;REV__ERN2|p.L515Wfs*48|1|0.41|ENSG00000134398|chr16:23700665-23700665|G/-|frameshift_variant;REV__ERN2|p.Q822Rfs*35|1|0.26|ENSG00000134398|chr16:23692019-23692019|G/-|frameshift_variant	79.71258880314673	0.09879134589249085	4				NaN	NaN	0	NaN	7435	3182	10612
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10636	28.887	NaN	13799	30	0	1851	0.214				-1	RSALKMIME	9	81	547.7892050567802	1093.5638571803604	2	547.790283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_RSALKMIM(Oxidation (M))E_	ENSG00000006715|ENST00000310301|VPS41;nc|ENSG00000006715|P49754-2|VPS41;nc|ENSG00000006715|P49754-3|VPS41	79.71258880314673	0.09879134589249085	4				NaN	NaN	0	NaN	7449	3185	10635
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10637	28.891	NaN	13607	30	0	6952.9	0.106	+			26475	LTLDHRLN	8	85	491.27732383326685	980.5400947333337	2	491.2772216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LTLDHRLN_	CADPS|p.L1098Vfs*5|1|0.37|ENSG00000163618|chr3:62478299-62478300|-/T|frameshift_variant;CADPS|p.R687C|1|0.2|ENSG00000163618|chr3:62536489-62536489|G/A|missense_variant;CADPS|p.R687H|1|0.3|ENSG00000163618|chr3:62536488-62536488|C/T|missense_variant;ENSG00000163618|ENST00000383710|CADPS;ENST00000490424.1_1_3:62521978-62535788:-|nuORF;nc|ENSG00000163618|Q9ULU8-3|CADPS;nc|ENSG00000163618|Q9ULU8-4|CADPS	35.61828744233558	0.6843154725607303	4				NaN	NaN	0	NaN	7450	3185	10635
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10638	28.893	NaN	10160	30	0	632.09	0.106	+			18507	ISIHVGQAG	9	62	441.2453170991903	880.4760812651806	2	441.2455139160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ISIHVGQAG_	ENSG00000075886|ENST00000321253|TUBA3D;ENSG00000123416|ENST00000336023|TUBA1B;ENSG00000152086|ENST00000312988|TUBA3E;ENSG00000167552|ENST00000301071|TUBA1A;ENSG00000167553|ENST00000301072|TUBA1C;ENSG00000198033|ENST00000400113|TUBA3C;ENST00000430114.1_1_1:202827276-202830656:-|nuORF;ENST00000443294.5_1_1:202822362-202830656:-|nuORF;ENST00000548363.1_1_12:49580068-49582762:-|nuORF;ENST00000550254.1_1_12:49580073-49582762:-|nuORF;ENST00000551324.5_1_12:49523262-49525083:-|nuORF;nc|ENSG00000123416|P68363-2|TUBA1B;nc|ENSG00000198033|P0DPH7-2|TUBA3C;TUBA3C|p.G144Afs*24|1|0.32|ENSG00000198033|chr13:19177554-19177554|A/-|frameshift_variant;TUBA3C|p.T361Rfs*18|1|0.17|ENSG00000198033|chr13:19174136-19174136|G/-|frameshift_variant;TUBA3D|p.G366Efs*13|1|0.17|ENSG00000075886|chr2:131482588-131482588|G/-|frameshift_variant;TUBA3D|p.V328Pfs*54|1|0.45|ENSG00000075886|chr2:131480665-131480666|-/CCCAAAGA|frameshift_variant;TUBA3E|p.Q176Rfs*14|1|0.58|ENSG00000152086|chr2:130194316-130194316|G/-|frameshift_variant	64.20726635412375	0.17854274437659667	4				NaN	NaN	0	NaN	7451	3185	10635
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10639	28.895	NaN	13398	30	0	2723.5	0.106	+			1305	AESVVPARM	9	80	480.2522248220178	958.4898967108356	2	480.2522888183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AESVVPARM_	ENSG00000167508|ENST00000301012|MVD;ENST00000565149.5_1_16:88718935-88722722:-|nuORF	82.24051045832904	0.08786059719216216	4				NaN	NaN	0	NaN	7452	3185	10635
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10640	28.897	NaN	15200	30	0	6233.2	0.106				-1	VVAMDKLRKM	10	71	408.2268362360211	1221.6586793082633	3	408.2272644042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Oxidation (M)	_VVAM(Oxidation (M))DKLRKM(Oxidation (M))_	ENSG00000125538|ENST00000263341|IL1B;ENST00000487639.1_1_2:113588742-113591137:-|nuORF;ENST00000491056.5_1_2:113590945-113593908:-|nuORF;ENST00000496280.5_1_2:113590945-113594323:-|nuORF	30.317721548370564	0.6322445173429027	4				NaN	NaN	0	NaN	7453	3185	10635
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10641	28.898	NaN	5507.8	30	0	720.39	0.035			+	3193	ASKKIEGKF	9	54	336.53385173438676	1006.5797258033604	3	336.5343322753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASKKIEGKF_	REV__tr|U7SUA5|U7SUA5_FUSNUOligopeptidaseFOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01160PE=3SV=1	16.473147378115264	0.6112419832031293	4				NaN	NaN	0	NaN	7454	3185	10635
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10642	28.899	NaN	18517	30	0	5696	0.138	+			51338	YSPEGHVL	8	86	451.2241741709818	900.4337954087637	2	451.2239685058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YSPEGHVL_	ENSG00000203485|ENST00000392634|INF2;INF2|p.G1056Afs*31|1|0.29|ENSG00000203485|chr14:104714323-104714323|C/-|frameshift_variant;INF2|p.G1212Dfs*19|1|0.9|ENSG00000203485|chr14:104714794-104714810|GGGGCCGGGCCTCAAAG/-|frameshift_variant;INF2|p.P438Lfs*120|1|1.0|ENSG00000203485|chr14:104707576-104707576|C/-|frameshift_variant;INF2|p.P472Qfs*86|1|0.43|ENSG00000203485|chr14:104707676-104707676|C/-|frameshift_variant;INF2|p.V530Wfs*28|3|0.32|ENSG00000203485|chr14:104707848-104707848|C/-|frameshift_variant;nc|ENSG00000203485|Q27J81-2|INF2;nc|ENSG00000203485|Q27J81-3|INF2	50.0245360154114	0.5941082100236891	4				NaN	NaN	0	NaN	7455	3185	10635
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10660	28.938	NaN	116170	30	0	14575	0.174	+			50450	YADVGGKQF	9	101	492.74312724836994	983.4717015635399	2	492.7427062988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YADVGGKQF_	ENSG00000180879|ENST00000370086|SSR4;ENST00000460616.5_1_X:153061851-153063636:+|nuORF;ENST00000485612.5_1_X:153061851-153063885:+|nuORF	148.98678547993487	0.0071052929883181565	4				NaN	NaN	0	NaN	7470	3188	10659
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10661	28.941	NaN	15479	30	0	4717.2	0.106	+			39006	SSSGFVAIK	9	63	448.24782537559787	894.4810978179958	2	448.2476501464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSSGFVAIK_	ENSG00000198478|ENST00000369838|SH3BGRL2;SH3BGRL2|p.P55Rfs*41|2|0.28|ENSG00000198478|chr6:79673727-79673727|C/-|frameshift_variant	104.0567914643314	0.03506238181059741	4				NaN	NaN	0	NaN	7471	3188	10659
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10662	28.943	NaN	20214	30	0	3728.6	0.106	+			41680	SVSDFNYSR	9	85	537.7451643960258	1073.4757758588514	2	537.7462768554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVSDFNYSR_	ENSG00000112851|ENST00000284037|ERBIN;nc|ENSG00000112851|Q96RT1-2|ERBIN;nc|ENSG00000112851|Q96RT1-3|ERBIN;nc|ENSG00000112851|Q96RT1-4|ERBIN;nc|ENSG00000112851|Q96RT1-5|ERBIN;nc|ENSG00000112851|Q96RT1-6|ERBIN;nc|ENSG00000112851|Q96RT1-7|ERBIN;nc|ENSG00000112851|Q96RT1-8|ERBIN;nc|ENSG00000112851|Q96RT1-9|ERBIN	63.53385203322761	0.18415635464017938	4				NaN	NaN	0	NaN	7472	3188	10659
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10663	28.944	NaN	37868	30	0	3553.7	0.106	+			42102	SYISRTNQL	9	90	541.2856551227798	1080.5567573123594	2	541.2857666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SYISRTNQL_	AHCTF1|p.E1870Kfs*19|1|0.27|ENSG00000153207|chr1:246850426-246850426|T/-|frameshift_variant;AHCTF1|p.G1113Wfs*13|1|0.07|ENSG00000153207|chr1:246867281-246867282|-/A|frameshift_variant;ENSG00000153207|ENST00000648844|AHCTF1;nc|ENSG00000153207|Q8WYP5-2|AHCTF1;nc|ENSG00000153207|Q8WYP5-3|AHCTF1	150.81021883065287	0.006680279908938716	4				NaN	NaN	0	NaN	7473	3188	10659
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10664	28.946	NaN	11661	30	0	1384.3	0.106	+			43329	TGASVIRAY	9	74	469.2571059802373	936.4996590272747	2	469.2585754394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TGASVIRAY_	ENSG00000108846|ENST00000285238|ABCC3;ENST00000502426.5_1_17:48736553-48755440:+|nuORF;nc|ENSG00000108846|O15438-2|ABCC3;nc|ENSG00000108846|O15438-4|ABCC3	120.8684288430529	0.02067403653475984	4				NaN	NaN	0	NaN	7474	3188	10659
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10665	28.948	NaN	13614	30	0	1641.8	0.106	+			26703	LVIDNGSGMCK	11	84	597.2868318197089	NaN	0	597.2863159179688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_LVIDNGSGMC(Carbamidomethyl (C))K_	ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196604|ENST00000409914|POTEF;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000204434|Q9BYX7|POTEKP;POTEE|p.N792Kfs*34|1|0.2|ENSG00000188219|chr2:131263828-131263829|-/A|frameshift_variant;POTEF|p.R728Gfs*16|3|0.06|ENSG00000196604|chr2:130075290-130075290|G/-|frameshift_variant	120.63048641472336	0.0006686135291203531	4				NaN	NaN	0	NaN	7475	3188	10659
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10666	28.95	NaN	6234.7	30	0	622.57	0.037	+			9400	EKFGLYGLAE	10	74	563.7936242661732	1125.5726955991463	2	563.7979125976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EKFGLYGLAE_	ENSG00000173809|ENST00000639142|TDRD12;nc|ENSG00000173809|Q587J7|TDRD12	42.33807565288922	0.5276008846745733	4				NaN	NaN	0	NaN	7476	3188	10659
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10683	28.985	NaN	110280	30	0	24534	0.186	+			40279	STSQTFIYK	9	95	537.7764470968433	1073.5383412604865	2	537.7781372070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STSQTFIYK_	ENSG00000004487|ENST00000400181|KDM1A;nc|ENSG00000004487|O60341|KDM1A	204.4243087208965	1.4601778531241419E-05	4				NaN	NaN	0	NaN	7490	3191	10682
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10684	28.988	NaN	45270	30	0	9869.7	0.106	+			41245	SVLGQAMEK	9	93	481.7533788509379	961.4922047686758	2	481.75286865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVLGQAMEK_	CYP51A1|p.L333Wfs*13|1|0.15|ENSG00000001630|chr7:92123208-92123208|A/-|frameshift_variant;ENSG00000001630|ENST00000003100|CYP51A1	131.61620852596164	0.014413238321579053	4				NaN	NaN	0	NaN	7491	3191	10682
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10685	28.99	NaN	58002	30	0	7502.8	0.106				-1	 	0	92	478.76107148522436	955.5075900372487	2	478.76214599609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7492	3191	10682
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10686	28.992	NaN	12870	30	0	2023.7	0.106	+			37793	SLYSVPEGQSK	11	75	597.8040364805922	1193.5935200279844	2	597.8056030273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLYSVPEGQSK_	ENSG00000184831|ENST00000379226|APOO;nc|ENSG00000184831|Q9BUR5-2|APOO	75.65223720490533	0.18861880313260296	4				NaN	NaN	0	NaN	7493	3191	10682
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10687	28.994	NaN	7530.5	30	0	779.77	0.106	+			47286	VNDGDMRLAD	10	79	553.2515116085046	1104.4884702838092	2	553.2522583007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VNDGDMRLAD_	ENSG00000108679|ENST00000262776|LGALS3BP	58.62960593111931	0.3783037861296717	4				NaN	NaN	0	NaN	7494	3191	10682
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10688	28.996	NaN	11473	30	0	968.33	0.106	+			9370	EKAHNQDLGL	10	87	562.7864683075094	1123.5583836818187	2	563.2913208007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EKAHNQDLGL_	ENSG00000081052|ENST00000396625|COL4A4;ENSG00000134871|ENST00000360467|COL4A2;ENST00000480609.1_1_13:111158832-111160640:+|nuORF	32.75053402867276	0.6123771875927935	4				NaN	NaN	0	NaN	7495	3191	10682
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10689	28.997	NaN	16054	30	0	1803.4	0.038			+	37346	SLESLIQEPVS	11	86	601.3188383290806	1200.623123724961	2	601.3202514648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SLESLIQEPVS_	REV__ENST00000606011.1_1_13:96328766-96328880:-|nuORF	81.52500206392136	0.13965942453989383	4				NaN	NaN	0	NaN	7496	3191	10682
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10705	29.03	NaN	100940	30	0	38337	0.214				-1	 	0	82	432.2341803409051	862.4538077486102	2	432.23455810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7509	3194	10704
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10706	29.034	NaN	56837	30	0	28023	0.106				-1	 	0	90	448.2711425065078	894.5277320798156	2	448.2714538574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7510	3194	10704
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10707	29.036	NaN	22485	30	0	2882.9	0.106	+			10968	FEAQGKPEL	9	86	509.76317125627344	1017.5117895793469	2	509.76409912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FEAQGKPEL_	ENSG00000088356|ENST00000202017|PDRG1	115.23196543181992	0.024086211614104236	4				NaN	NaN	0	NaN	7511	3194	10704
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10708	29.038	NaN	31172	30	0	2515.8	0.106	+			12435	GEASKLQQF	9	90	504.2613460299555	NaN	0	504.2613220214844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEASKLQQF_	ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1	145.46060221211434	0.0012874588161947572	4				NaN	NaN	0	NaN	7512	3194	10704
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10709	29.039	NaN	42633	30	0	3725.8	0.106				-1	 	0	87	528.3153442413667	1054.6161355495333	2	528.31640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7513	3194	10704
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10710	29.041	NaN	18881	30	0	4395	0.037	+			42850	TEFRNIQKL	9	90	383.55210127608234	1147.634474428447	3	383.5522155761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TEFRNIQKL_	chr10:128113602-128116491|398|11.56|0.71|4.03|-|ENST00000368653|MKI67,MKI67;ENSG00000148773|ENST00000368654|MKI67;MKI67|p.L2374*|1|0.28|ENSG00000148773|chr10:128104719-128104719|A/-|frameshift_variant;MKI67|p.R3036Yfs*27|1|0.04|ENSG00000148773|chr10:128102735-128102736|-/AAAATAA|frameshift_variant;nc|ENSG00000148773|P46013-2|MKI67	42.396135135203025	0.392153681582562	4				NaN	NaN	0	NaN	7514	3194	10704
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10711	29.042	NaN	17965	30	0	2029.3	0.139	+			16965	HPQPGAVEL	9	70	474.25010880395183	946.4856646747037	2	474.2505798339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HPQPGAVEL_	ENSG00000084774|ENST00000264705|CAD	64.20726635412375	0.17854274437659667	4				NaN	NaN	0	NaN	7515	3194	10704
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10729	29.08	NaN	130410	30	0	29852	0.214				-1	 	0	90	352.5458112941022	1054.6156044825066	3	352.5464172363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7530	3197	10728
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10730	29.084	NaN	64709	30	0	29043	0.106			+	-1	CIAVLKHPLAP	11	77	406.9060391066805	1217.6962879202415	3	406.9064636230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_C(Carbamidomethyl (C))IAVLKHPLAP_	REV__AASS|p.L740Ifs*13|1|0.21|ENSG00000008311|chr7:122081562-122081563|-/T|frameshift_variant;REV__AASS|p.P693Qfs*3|2|0.34|ENSG00000008311|chr7:122086120-122086120|A/-|frameshift_variant;REV__ENSG00000008311|ENST00000417368|AASS	26.063383197487333	0.7164075632144343	4				NaN	NaN	0	NaN	7531	3197	10728
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10731	29.086	NaN	19073	30	0	4369.7	0.106	+			23714	LAVDKSASL	9	80	452.2603431938392	902.5061334544785	2	452.2607727050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LAVDKSASL_	ENSG00000065526|ENST00000375759|SPEN;SPEN|p.A2105Lfs*33|1|0.46|ENSG00000065526|chr1:15932548-15932548|G/-|frameshift_variant;SPEN|p.A2251Qfs*102|3|0.29|ENSG00000065526|chr1:15932985-15932985|C/-|frameshift_variant	93.5975768576971	0.05472259948179787	4				NaN	NaN	0	NaN	7532	3197	10728
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10732	29.088	NaN	29869	30	0	5542.6	0.106			+	13360	GLAAMVGAISG	11	100	481.7533788509379	961.4922047686758	2	482.26025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_GLAAM(Oxidation (M))VGAISG_	REV__ENSG00000175505|ENST00000312438|CLCF1;REV__nc|ENSG00000175505|Q9UBD9-2|CLCF1	47.657333605630114	0.4531673460382624	4				NaN	NaN	0	NaN	7533	3197	10728
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10733	29.09	NaN	38444	30	0	9194	0.106	+			31657	QNARSTNSL	9	92	495.7531408681897	989.4917288031794	2	495.7551574707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QNARSTNSL_	THE1B-int_dup1996|chr7:8345870-8347393:+|1.2346957743909006|0.2358979979729452|2.39|457.0|6|1|sense	93.19546047674547	0.05585629608842056	4				NaN	NaN	0	NaN	7534	3197	10728
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10734	29.091	NaN	25313	30	0	3322.1	0.034	+			36187	SELITKAVA	9	97	466.27633566026196	930.538118387324	2	466.2764892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SELITKAVA_	ENSG00000124575|ENST00000244534|H1-3;ENSG00000168298|ENST00000304218|H1-4;ENSG00000184357|ENST00000331442|H1-5;ENSG00000187837|ENST00000343677|H1-2	61.691277971877994	0.19951612995419254	4				NaN	NaN	0	NaN	7535	3197	10728
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10735	29.092	NaN	26617	30	0	6221	0.14	+			32309	QTQPIYLAK	9	97	531.3027241232915	1060.5908953133828	2	531.3037719726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QTQPIYLAK_	ENSG00000183856|ENST00000361170|IQGAP3;IQGAP3|p.Q1205Sfs*31|1|0.4|ENSG00000183856|chr1:156534628-156534628|G/-|frameshift_variant	87.69643885390035	0.07135982304947239	4				NaN	NaN	0	NaN	7536	3197	10728
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10749	29.123	NaN	56294	30	0	10174	0.214	+			2179	ALMIWKGLI	9	100	522.8176972632281	1043.620841593256	2	522.8186645507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ALMIWKGLI_	ENSG00000166562|ENST00000587834|SEC11C;ENST00000585864.1_1_18:56807180-56819918:+|nuORF	66.42927471994793	0.16001998865088202	4				NaN	NaN	0	NaN	7547	3200	10748
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10750	29.126	NaN	17334	30	0	1850.1	0.106	+			43966	TPEEKSAVTAL	11	90	573.305236011735	1144.59591909027	2	573.3062744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TPEEKSAVTAL_	ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF	75.65223720490533	0.18861880313260296	4				NaN	NaN	0	NaN	7548	3200	10748
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10751	29.128	NaN	29668	30	0	4634.7	0.106	+			5469	AVAAFQVEK	9	97	481.7686316572902	NaN	0	481.7685852050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVAAFQVEK_	ENSG00000185000|ENST00000528718|DGAT1;ENST00000525371.1_1_8:145542007-145542573:-|nuORF;ENST00000531896.5_1_8:145541583-145550314:-|nuORF	101.25262130126117	0.018912469721856617	4				NaN	NaN	0	NaN	7549	3200	10748
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10752	29.13	NaN	22564	30	0	16153	0.106				-1	EVWCLVLCR	9	74	589.2966669167463	1176.5787809002925	2	589.2977905273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_EVWC(Carbamidomethyl (C))LVLCR_	ENST00000487189.5_1_16:11118684-11138007:+|nuORF	49.44154591367651	0.3095138337212152	4				NaN	NaN	0	NaN	7550	3200	10748
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10753	29.132	NaN	21537	30	0	3291	0.106	+			49695	VYKPAQNSW	9	89	546.7760438875736	NaN	0	546.777587890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VYKPAQNSW_	ENSG00000120696|ENST00000379483|KBTBD7;ENSG00000165572|ENST00000379485|KBTBD6;KBTBD6|p.C613Afs*34|1|0.51|ENSG00000165572|chr13:41130675-41130675|A/-|frameshift_variant	106.68306549817024	0.012692596758972883	4				NaN	NaN	0	NaN	7551	3200	10748
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10754	29.134	NaN	22220	30	0	1829	0.034				-1	 	0	90	456.7136478342461	911.4127427352922	2	456.7140197753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7552	3200	10748
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10755	29.134	NaN	33099	30	0	4994.6	0.139	+			41376	SVMGVTVSR	9	85	468.25200138476737	934.4894498363348	2	468.25213623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVMGVTVSR_	DIP2B|p.A1021Cfs*11|1|0.32|ENSG00000066084|chr12:50721279-50721280|-/CTGTATGCAC|frameshift_variant;DIP2B|p.I979Afs*17|1|0.13|ENSG00000066084|chr12:50718790-50718815|AAATAGAAGAGAATGATTTGGTGAGG/-|frameshift_variant;DIP2B|p.V1240Dfs*9|1|0.05|ENSG00000066084|chr12:50731445-50731446|-/ATATTTAC|frameshift_variant;DIP2B|p.V893Gfs*91|1|0.06|ENSG00000066084|chr12:50714417-50714418|-/G|frameshift_variant;ENSG00000066084|ENST00000301180|DIP2B	126.24258497203832	0.01742065577488747	4				NaN	NaN	0	NaN	7553	3200	10748
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10773	29.172	NaN	26777	30	0	2136.6	0.214	+			36600	SGATIRIFK	9	95	496.7972067824553	991.5798606317106	2	496.79779052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SGATIRIFK_	ENSG00000100596|ENST00000216484|SPTLC2;ENSG00000172296|ENST00000399002|SPTLC3	101.45984612302182	0.0377122763612125	4				NaN	NaN	0	NaN	7568	3203	10772
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10774	29.176	NaN	23488	30	0	2742.2	0.106	+			43207	TEVIQVKP	8	96	457.2707279259843	912.5269029187687	2	457.27105712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEVIQVKP_	ENSG00000187527|ENST00000342358|ATP13A5	44.116797842482775	0.6307669463330267	4				NaN	NaN	0	NaN	7569	3203	10772
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10775	29.178	NaN	7679.6	30	0	2788.1	0.106				-1	 	0	46	340.20562952012017	1017.5950591605606	3	340.2062072753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7570	3203	10772
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10776	29.18	NaN	6148.6	30	0	761.88	0.106	+			45109	TVIQSTQGMYK	11	74	628.3203933878739	1254.6262338425477	2	628.3213500976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TVIQSTQGMYK_	ENSG00000165434|ENST00000298198|PGM2L1;PGM2L1|p.S149Qfs*22|1|0.29|ENSG00000165434|chr11:74370928-74370928|A/-|frameshift_variant;PGM2L1|p.S299Lfs*19|1|0.24|ENSG00000165434|chr11:74347192-74347192|A/-|frameshift_variant	102.95473732560676	0.05457861179418332	4				NaN	NaN	0	NaN	7571	3203	10772
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10777	29.182	NaN	28209	30	0	3316.4	0.106	+			28366	NEKVIEHIM	9	86	556.7910984631076	1111.567643993015	2	556.79248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NEKVIEHIM_	ENSG00000163220|ENST00000368738|S100A9	145.46060221211434	0.007927189773590037	4				NaN	NaN	0	NaN	7572	3203	10772
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10778	29.183	NaN	10019	30	0	1907.1	0.034				-1	 	0	67	462.7680632230154	923.5215735128309	2	462.768310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7573	3203	10772
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10779	29.184	NaN	9427.3	30	0	1114	0.14	+			27604	MPNGTVQRF	9	86	525.2626972790794	1048.5108416249586	2	525.263427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MPNGTVQRF_	BPTF|p.D2844Afs*20|1|0.08|ENSG00000171634|chr17:67959766-67959767|-/C|frameshift_variant;BPTF|p.K2718Nfs*36|3|0.12|ENSG00000171634|chr17:67948150-67948150|A/-|frameshift_variant;ENSG00000171634|ENST00000306378|BPTF;ENST00000582406.1_1_17:65940388-65941531:+|nuORF;ENST00000584931.1_1_17:65936727-65940601:+|nuORF;nc|ENSG00000171634|Q12830-4|BPTF;nc|ENSG00000171634|Q12830|BPTF	88.17693792209575	0.07000514020414955	4				NaN	NaN	0	NaN	7574	3203	10772
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10796	29.22	NaN	375220	30	0	122790	0.144				-1	GEMVARGSN	9	79	468.71350500886206	935.4124570845241	2	468.7138366699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_GEM(Oxidation (M))VARGSN_	ENSG00000137674|ENST00000260228|MMP20	56.72105179125745	0.24094814563026265	4				NaN	NaN	0	NaN	7588	3206	10795
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10797	29.223	NaN	24051	30	0	4151.5	0.106	+			16325	HEKFSEVL	8	93	494.7572564595321	987.4999599858642	2	494.7583312988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HEKFSEVL_	CKB|p.G303D|1|0.22|ENSG00000166165|chr14:103520181-103520181|C/T|missense_variant;ENSG00000166165|ENST00000348956|CKB	96.19043198914106	0.25873003980794995	4				NaN	NaN	0	NaN	7589	3206	10795
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10798	29.225	NaN	16461	30	0	4148.8	0.106	+			44819	TTSNFTFSK	9	79	516.7533763518379	1031.4921997704757	2	516.753662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TTSNFTFSK_	ENSG00000160294|ENST00000291688|MCM3AP;MCM3AP|p.K492Efs*5|1|0.29|ENSG00000160294|chr21:46280545-46280546|-/C|frameshift_variant	91.26522074875469	0.06129826844580791	4				NaN	NaN	0	NaN	7590	3206	10795
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10799	29.226	NaN	14351	30	0	2146.8	0.106	+			23985	LDVSGPKV	8	79	407.73670257914824	813.4588522250965	2	407.7369384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LDVSGPKV_	AHNAK|p.A4215V|1|0.31|ENSG00000124942|chr11:62521773-62521773|G/A|missense_variant;AHNAK|p.I4226V|1|0.1|ENSG00000124942|chr11:62521741-62521741|T/C|missense_variant;AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK;ENSG00000124942|ENST00000378024|AHNAK;ENSG00000124942|ENST00000378024|AHNAK;ENSG00000124942|ENST00000378024|AHNAK;ENSG00000124942|ENST00000378024|AHNAK	110.11987700582712	0.24509564897437786	4				NaN	NaN	0	NaN	7591	3206	10795
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10800	29.228	NaN	11243	30	0	4263.6	0.106	+			30907	QEKVSDYEM	9	78	564.7464452331061	1127.478337533012	2	564.7477416992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QEKVSDYEM_	ENSG00000132646|ENST00000379143|PCNA	112.41091882917199	0.026537921851008135	4				NaN	NaN	0	NaN	7592	3206	10795
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10801	29.23	NaN	22342	30	0	2619.1	0.106				-1	 	0	99	537.3205799315219	1072.6266069298438	2	537.3216552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7593	3206	10795
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10802	29.232	NaN	12315	30	0	1424.7	0.037	+			36391	SETKKGFYSL	10	79	580.302599296098	1158.590645658996	2	580.3034057617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SETKKGFYSL_	ENSG00000155926|ENST00000338087|SLA;nc|ENSG00000155926|Q13239-2|SLA;nc|ENSG00000155926|Q13239-3|SLA;nc|ENSG00000155926|Q13239-5|SLA	104.01359247289065	0.06577755598965461	4				NaN	NaN	0	NaN	7594	3206	10795
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10815	29.259	NaN	21696	30	0	2979.7	0.214				-1	 	0	79	521.7792452772289	1041.5439376212578	2	521.7801513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7604	3209	10814
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10816	29.263	NaN	16057	30	0	2437.5	0.106	+			43255	TEYETQVKV	9	78	548.7785757444119	1095.5425985556237	2	548.77978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEYETQVKV_	ENSG00000120948|ENST00000240185|TARDBP;nc|ENSG00000120948|Q13148-4|TARDBP	112.10723106719422	0.02684780151337622	4				NaN	NaN	0	NaN	7605	3209	10814
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10817	29.265	NaN	26118	30	0	5434.1	0.106				-1	 	0	92	450.7785393341356	899.5425257350712	2	450.77886962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7606	3209	10814
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10818	29.267	NaN	14968	30	0	2366	0.106	+			42901	TEHINIHQL	9	73	552.7927944695416	1103.5710360058831	2	552.7938842773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TEHINIHQL_	ENSG00000180353|ENST00000314583|HCLS1;ENST00000481314.5_1_3:121363541-121379717:-|nuORF;ENST00000487290.5_1_3:121363549-121379717:-|nuORF;nc|ENSG00000180353|P14317-2|HCLS1	87.69643885390035	0.07135982304947239	4				NaN	NaN	0	NaN	7607	3209	10814
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10819	29.268	NaN	7324	30	0	1241.3	0.106			+	44466	TSPWCTLLALP	11	84	601.3188383290806	1200.623123724961	2	601.822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TSPWCTLLALP_	REV__nc|ENSG00000165966|Q6ZMN7-4|PDZRN4	44.377184641726394	0.49804979881800077	4				NaN	NaN	0	NaN	7608	3209	10814
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10820	29.27	NaN	10775	30	0	2307.7	0.038			+	-1	CSARGPRKVE	10	76	387.20460861929894	1158.591996458097	3	387.20458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_C(Carbamidomethyl (C))SARGPRKVE_	REV__ENST00000513392.1_1_5:56873683-56910006:+|nuORF	28.5767321226876	0.6464621404813697	4				NaN	NaN	0	NaN	7609	3209	10814
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10821	29.271	NaN	5087.8	30	0	1124.4	0.14	+			2045	AKSLKQSVF	9	57	336.53385173438676	1006.5797258033604	3	336.53424072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AKSLKQSVF_	MTBP|p.K383Sfs*12|1|0.11|ENSG00000172167|chr8:120470916-120470916|A/-|frameshift_variant	24.519189625965996	0.574102787014149	4				NaN	NaN	0	NaN	7610	3209	10814
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10835	29.302	NaN	57492	30	0	5284	0.186	+			35960	SEGRTFEM	8	103	478.7100012322629	955.4054495313259	2	478.7104797363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEGRTFEM_	ENSG00000136068|ENST00000295956|FLNB;ENST00000481470.5_1_3:58118395-58154450:+|nuORF;nc|ENSG00000136068|O75369-2|FLNB;nc|ENSG00000136068|O75369-3|FLNB;nc|ENSG00000136068|O75369-4|FLNB;nc|ENSG00000136068|O75369-5|FLNB;nc|ENSG00000136068|O75369-6|FLNB;nc|ENSG00000136068|O75369-7|FLNB;nc|ENSG00000136068|O75369-8|FLNB;nc|ENSG00000136068|O75369-9|FLNB	60.11826168202944	0.5006107059937851	4				NaN	NaN	0	NaN	7621	3212	10834
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10836	29.305	NaN	95181	30	0	28415	0.106	+			49661	VYISEHEHF	9	92	387.51706500573744	1159.5293656174124	3	387.51715087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYISEHEHF_	ENSG00000104853|ENST00000337392|CLPTM1;nc|ENSG00000104853|O96005-3|CLPTM1;nc|ENSG00000104853|O96005-4|CLPTM1	84.9155231211612	0.07920012719736333	4				NaN	NaN	0	NaN	7622	3212	10834
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10837	29.307	NaN	22472	30	0	3589.2	0.106	+			14025	GSGAFGTVYK	10	89	493.7495205240517	985.4844881149035	2	493.75030517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GSGAFGTVYK_	ENSG00000141736|ENST00000269571|ERBB2;ENSG00000146648|ENST00000275493|EGFR;ENSG00000178568|ENST00000342788|ERBB4;ENST00000484594.5_1_2:212426591-213403254:-|nuORF;ENST00000583038.5_1_17:37872360-37881463:+|nuORF;ERBB4|p.H801Mfs*27|1|0.39|ENSG00000178568|chr2:211561989-211561989|G/-|frameshift_variant;ERBB4|p.N1177Mfs*27|1|0.33|ENSG00000178568|chr2:211384012-211384012|T/-|frameshift_variant;nc|ENSG00000141736|P04626-2|ERBB2;nc|ENSG00000141736|P04626-3|ERBB2;nc|ENSG00000141736|P04626-4|ERBB2;nc|ENSG00000141736|P04626-5|ERBB2;nc|ENSG00000141736|P04626-6|ERBB2;nc|ENSG00000178568|Q15303-2|ERBB4;nc|ENSG00000178568|Q15303-3|ERBB4;nc|ENSG00000178568|Q15303-4|ERBB4	131.61620852596164	0.01298938390812184	4				NaN	NaN	0	NaN	7623	3212	10834
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10838	29.309	NaN	17246	30	0	3261.5	0.106	+			1925	AISDVIGNK	9	77	458.75803472659595	915.5015165199919	2	458.75836181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AISDVIGNK_	ENSG00000089902|ENST00000262241|RCOR1	107.00750918261382	0.032051501805654005	4				NaN	NaN	0	NaN	7624	3212	10834
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10839	29.311	NaN	20151	30	0	3240.8	0.106				-1	 	0	91	451.223667980834	450.21639151423403	1	451.22406005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7625	3212	10834
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10840	29.312	NaN	13747	30	0	5864.3	0.106				-1	 	0	73	430.73937066940977	859.4641884056196	2	430.7396545410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7626	3212	10834
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10841	29.314	NaN	20365	30	0	5517.7	0.035	+			49789	VYSGPIGTAI	10	77	489.27002317007145	976.5254934069429	2	489.26849365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VYSGPIGTAI_	ENSG00000187616|ENST00000339996|MYMK	70.8162118820467	0.27065172005956	4				NaN	NaN	0	NaN	7627	3212	10834
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10855	29.343	NaN	35417	30	0	6137.9	0.214				-1	 	0	93	551.773887926048	1101.533222918896	2	551.7747192382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7638	3215	10854
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10856	29.347	NaN	6875.6	30	0	3704.1	0.106	+			18134	ILIDHLRAP	9	59	349.88099115325195	1046.621144059956	3	349.8817138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ILIDHLRAP_	ENSG00000125967|ENST00000246190|NECAB3;ENST00000483813.5_1_20:32245637-32250053:-|nuORF;ENST00000485399.5_1_20:32245637-32248074:-|nuORF;ENST00000485976.5_1_20:32245637-32251387:-|nuORF;ENST00000494174.5_1_20:32245637-32248074:-|nuORF;ENST00000606525.5_1_20:32245637-32250053:-|nuORF;nc|ENSG00000125967|Q96P71-2|NECAB3	26.69291269510374	0.5537881896960711	4				NaN	NaN	0	NaN	7639	3215	10854
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10857	29.349	NaN	5821.7	30	0	1825.3	0.106	+			20613	KGDHPLQV	8	70	447.2446641845235	892.474775435847	2	447.2452392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KGDHPLQV_	ENST00000377365.3_1_5:169311764-169407338:-|nuORF	49.44154591367651	0.597725784090933	4				NaN	NaN	0	NaN	7640	3215	10854
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10858	29.351	NaN	5967	30	0	1371.6	0.106	+			19148	IYNRSQPVL	9	77	545.3054806523252	1088.5964083714503	2	545.3062744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IYNRSQPVL_	ENSG00000197142|ENST00000354655|ACSL5;ENST00000496328.1_1_10:114181742-114186129:+|nuORF;nc|ENSG00000197142|Q9ULC5-3|ACSL5;nc|ENSG00000197142|Q9ULC5-4|ACSL5	42.396135135203025	0.392153681582562	4				NaN	NaN	0	NaN	7641	3215	10854
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10859	29.353	NaN	8119.9	30	0	1265.6	0.106			+	27255	MESETRRH	8	79	531.2425247530457	1060.4704965728913	2	531.2382202148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_M(Oxidation (M))ESETRRH_	REV__ENSG00000176915|ENST00000357997|ANKLE2;REV__nc|ENSG00000176915|Q86XL3-3|ANKLE2	60.97194046774394	0.49215940876911696	4				NaN	NaN	0	NaN	7642	3215	10854
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10860	29.354	NaN	1563	30	0	893.79	0.03				-1	 	0	38	329.21908389379405	656.4236148543881	2	329.2195739746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7643	3215	10854
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10861	29.355	NaN	4401.8	30	0	357.29	0.142	+			49662	VYISEHEHF	9	76	580.7715512088145	1159.5285494844288	2	580.77294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VYISEHEHF_	ENSG00000104853|ENST00000337392|CLPTM1;nc|ENSG00000104853|O96005-3|CLPTM1;nc|ENSG00000104853|O96005-4|CLPTM1	82.24051045832904	0.08786059719216216	4				NaN	NaN	0	NaN	7644	3215	10854
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10877	29.39	NaN	69625	30	0	13154	0.194	+			36182	SELITKAV	8	98	430.75718215925315	859.4998113853063	2	430.75775146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SELITKAV_	ENSG00000124575|ENST00000244534|H1-3;ENSG00000168298|ENST00000304218|H1-4;ENSG00000184357|ENST00000331442|H1-5;ENSG00000187837|ENST00000343677|H1-2	69.6276240434122	0.4100012001731381	4				NaN	NaN	0	NaN	7657	3218	10876
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10878	29.393	NaN	28181	30	0	15829	0.106	+			45886	VAPEEHPVL	9	80	495.76569611443205	989.5168392956641	2	495.76611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VAPEEHPVL_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF	53.351449002276354	0.2690372970092375	4				NaN	NaN	0	NaN	7658	3218	10876
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10879	29.395	NaN	35013	30	0	4011.7	0.106				-1	 	0	83	526.3103164173589	1050.6060799015177	2	526.3111572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7659	3218	10876
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10880	29.397	NaN	45169	30	0	6464.1	0.106			+	18282	IPLAMSSIM	9	88	489.75312424083256	977.4916955484651	2	489.7534484863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_IPLAM(Oxidation (M))SSIM_	REV__ENSG00000171657|ENST00000302548|GPR82;REV__GPR82|p.T48Hfs*11|1|0.4|ENSG00000171657|chrX:41727162-41727162|A/-|frameshift_variant	40.5726180659479	0.4135428067754104	4				NaN	NaN	0	NaN	7660	3218	10876
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10881	29.399	NaN	18267	30	0	1241.2	0.106				-1	 	0	80	528.3153442413667	1054.6161355495333	2	528.3162841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7661	3218	10876
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10882	29.4	NaN	14446	30	0	2076.2	0.106				-1	REKMTQIMF	9	81	600.2984369252069	1198.5823209172138	2	600.29931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_REKM(Oxidation (M))TQIMF_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196604|ENST00000409914|POTEF;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000415776.1_1_Y:19869357-19869702:-|nuORF;ENST00000446382.2_1_9:6834760-6835018:+|nuORF;ENST00000457622.1_1_6:46172676-46173294:+|nuORF;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;nc|ENSG00000204434|Q9BYX7|POTEKP	38.753607047826485	0.4348790777924195	4				NaN	NaN	0	NaN	7662	3218	10876
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10883	29.402	NaN	15011	30	0	2956.4	0.033	+			3308	ASLTAALAK	9	80	423.25775652715527	844.5009601211106	2	423.2580261230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASLTAALAK_	ENSG00000197892|ENST00000524189|KIF13B;nc|ENSG00000197892|Q9NQT8-2|KIF13B	85.16082228582465	0.07850854922700509	4				NaN	NaN	0	NaN	7663	3218	10876
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10901	29.439	NaN	41819	30	0	10353	0.214				-1	 	0	101	501.3023487732266	1000.5901446132532	2	501.3028259277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7678	3221	10900
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10902	29.443	NaN	44045	30	0	20451	0.106			+	-1	MLAMVIALD	9	82	496.7611084716588	991.5076640101177	2	496.76165771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_MLAM(Oxidation (M))VIALD_	REV__ENST00000440965.1_1_2:202003207-202003609:-|nuORF	47.91560031466742	0.327412564698279	4				NaN	NaN	0	NaN	7679	3221	10900
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10903	29.445	NaN	60924	30	0	11139	0.106				-1	 	0	83	422.71314126067597	843.411729588152	2	422.71343994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7680	3221	10900
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10904	29.446	NaN	21737	30	0	3303.4	0.106	+			15445	GTYVGLTCK	9	70	471.2409368089415	940.467320684683	2	471.2413330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTYVGLTCK_	ENSG00000221926|ENST00000649191|TRIM16;nc|ENSG00000221926|O95361-2|TRIM16;nc|ENSG00000291110|Q309B1|TRIM16L	61.691277971877994	0.19951612995419254	4				NaN	NaN	0	NaN	7681	3221	10900
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10905	29.448	NaN	13987	30	0	5059.5	0.106	+			32602	QYLEQSSKL	9	78	548.2868085874994	1094.5590642417988	2	548.287841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QYLEQSSKL_	CSTF3|p.K439Nfs*33|4|0.35|ENSG00000176102|chr11:33096364-33096364|T/-|frameshift_variant;ENSG00000176102|ENST00000323959|CSTF3	104.01359247289065	0.03510646158778409	4				NaN	NaN	0	NaN	7682	3221	10900
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10906	29.45	NaN	32651	30	0	6604.3	0.034	+			14787	GTLASSFAR	9	86	455.242453579088	NaN	0	455.2427673339844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTLASSFAR_	ENST00000563117.5_1_16:20817227-20817782:-|nuORF;ENST00000565884.5_1_16:20817227-20817407:-|nuORF	109.47833844074708	0.010168233843482827	4				NaN	NaN	0	NaN	7683	3221	10900
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10907	29.451	NaN	28347	30	0	12831	0.142				-1	 	0	66	363.219997786789	1086.638163960567	3	363.22039794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7684	3221	10900
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10922	29.484	NaN	176770	30	0	31657	0.166	+			3825	ATAIGMPVEK	10	96	508.7752440363934	1015.5359351395869	2	508.77581787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATAIGMPVEK_	ENSG00000109736|ENST00000355443|MFSD10;ENST00000509676.1_1_4:2934766-2935650:-|nuORF;MFSD10|p.S111Gfs*48|1|0.44|ENSG00000109736|chr4:2933125-2933147|GGGCGCCTCCCCAAGCAGTCAGA/-|frameshift_variant	133.9934435666947	0.012355562819581703	4				NaN	NaN	0	NaN	7696	3224	10921
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10923	29.487	NaN	60715	30	0	25663	0.106	+			30986	QERLATAL	8	90	451.2582508915002	900.5019488498004	2	451.2584533691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QERLATAL_	CON__Q3SX28;ENSG00000140416|ENST00000403994|TPM1;ENSG00000143549|ENST00000651641|TPM3;ENSG00000167460|ENST00000643579|TPM4;ENSG00000198467|ENST00000645482|TPM2;ENST00000391998.3_1_19:53982744-53982942:+|nuORF;ENST00000471212.5_1_9:35684790-35689844:-|nuORF;ENST00000473036.2_1_1:154145382-154155604:-|nuORF;ENST00000520239.1_1_8:70041855-70042335:+|nuORF;ENST00000558400.1_1_15:63349204-63351954:+|nuORF;ENST00000558868.5_1_15:63340774-63353139:+|nuORF;ENST00000560975.5_1_15:63335715-63353895:+|nuORF;ENST00000587201.5_1_19:16187360-16198908:+|nuORF;nc|ENSG00000140416|P09493-10|TPM1;nc|ENSG00000140416|P09493-2|TPM1;nc|ENSG00000140416|P09493-3|TPM1;nc|ENSG00000140416|P09493-4|TPM1;nc|ENSG00000140416|P09493-5|TPM1;nc|ENSG00000140416|P09493-6|TPM1;nc|ENSG00000140416|P09493-7|TPM1;nc|ENSG00000140416|P09493-8|TPM1;nc|ENSG00000140416|P09493-9|TPM1;nc|ENSG00000143549|P06753-2|TPM3;nc|ENSG00000143549|P06753-3|TPM3;nc|ENSG00000143549|P06753-4|TPM3;nc|ENSG00000143549|P06753-5|TPM3;nc|ENSG00000143549|P06753-6|TPM3;nc|ENSG00000167460|P67936-2|TPM4;nc|ENSG00000198467|P07951-2|TPM2;nc|ENSG00000198467|P07951-3|TPM2	101.60071028292904	0.24979566554663588	4				NaN	NaN	0	NaN	7697	3224	10921
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10924	29.489	NaN	18987	30	0	2824.3	0.106			+	31883	QQAAPAEGAL	10	80	478.2451177931209	954.4756826530419	2	478.2454528808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QQAAPAEGAL_	REV__nc|ENSG00000118557|Q8TBY8-1|PMFBP1	47.657333605630114	0.47858658696240314	4				NaN	NaN	0	NaN	7698	3224	10921
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10925	29.49	NaN	11924	30	0	4432.1	0.106	+			26092	LSNAAREL	8	69	437.24249849906573	872.4704440649315	2	437.24273681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSNAAREL_	ENSG00000124532|ENST00000378386|MRS2;ENST00000483634.1_1_6:24408642-24418827:+|nuORF;MRS2|p.K414Rfs*11|2|0.26|ENSG00000124532|chr6:24423599-24423599|A/-|frameshift_variant;nc|ENSG00000124532|Q9HD23-2|MRS2;nc|ENSG00000124532|Q9HD23-4|MRS2	82.30502934623384	0.30436709589983096	4				NaN	NaN	0	NaN	7699	3224	10921
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10926	29.492	NaN	20529	30	0	2328.3	0.106	+			13656	GNDLHVGSE	9	81	464.2114707606265	926.4083885880531	2	464.2120056152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GNDLHVGSE_	ENSG00000004399|ENST00000324093|PLXND1;nc|ENSG00000004399|Q9Y4D7-2|PLXND1;PLXND1|p.P1734Hfs*40|1|0.26|ENSG00000004399|chr3:129559716-129559716|G/-|frameshift_variant;PLXND1|p.S1268Qfs*34|1|0.3|ENSG00000004399|chr3:129569907-129569908|-/C|frameshift_variant;PLXND1|p.T1897Rfs*17|1|0.06|ENSG00000004399|chr3:129556402-129556402|G/-|frameshift_variant	42.86426827375447	0.38666266728046506	4				NaN	NaN	0	NaN	7700	3224	10921
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10927	29.494	NaN	22996	30	0	1955.3	0.106			+	7008	CRRRGSRRRK	10	87	444.2666551367446	NaN	0	444.2681579589844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_CRRRGSRRRK_	REV__CPLX2|p.G22Efs*51|1|0.33|ENSG00000145920|chr5:175878936-175878936|G/-|frameshift_variant;REV__CPLX2|p.K33Rfs*40|1|0.12|ENSG00000145920|chr5:175878970-175878970|A/-|frameshift_variant	51.52775601994872	0.29594378441454594	4				NaN	NaN	0	NaN	7701	3224	10921
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10928	29.496	NaN	6638.1	30	0	556.68	0.035	+			11783	FSNGRDLLI	9	77	517.7838158783568	1033.5530788235135	2	517.7853393554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FSNGRDLLI_	ENSG00000081479|ENST00000649046|LRP2;LRP2|p.E535Gfs*3|1|0.12|ENSG00000081479|chr2:169277913-169277914|-/C|frameshift_variant;LRP2|p.S714Hfs*51|1|0.34|ENSG00000081479|chr2:169271084-169271084|A/-|frameshift_variant	65.46538089061403	0.16805504838372562	4				NaN	NaN	0	NaN	7702	3224	10921
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10946	29.532	NaN	297650	30	0	30273	0.171	+			1623	AGMALGIQK	9	111	444.75149899341966	887.4884450536393	2	444.7521667480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AGMALGIQK_	ENSG00000174851|ENST00000376901|YIF1A	148.20599733432147	0.007287282186870133	4				NaN	NaN	0	NaN	7717	3227	10945
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10947	29.535	NaN	12337	30	0	1018.8	0.106	+			45060	TVHGVTQAF	9	81	480.2507177035546	958.4868824739092	2	480.2508850097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVHGVTQAF_	ENSG00000006015|ENST00000358607|REX1BD;ENST00000597371.1_1_19:18699887-18702987:+|nuORF;ENST00000598375.5_1_19:18699887-18701110:+|nuORF;ENST00000600997.5_1_19:18699887-18701744:+|nuORF;nc|ENSG00000006015|Q96EN9-2|REX1BD;nc|ENSG00000006015|Q96EN9-3|REX1BD	65.46538089061403	0.16805504838372562	4				NaN	NaN	0	NaN	7718	3227	10945
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10948	29.537	NaN	9622.7	30	0	1667.5	0.106	+			12699	GEKLLRPSL	9	61	338.2095007860229	1011.6066729582687	3	338.2098083496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEKLLRPSL_	ENSG00000064651|ENST00000262461|SLC12A2;nc|ENSG00000064651|P55011-3|SLC12A2;SLC12A2|p.E1119Rfs*7|1|0.47|ENSG00000064651|chr5:128184417-128184418|-/A|frameshift_variant;SLC12A2|p.F466Lfs*59|1|0.11|ENSG00000064651|chr5:128135793-128135793|T/-|frameshift_variant;SLC12A2|p.P1171Sfs*18|1|0.38|ENSG00000064651|chr5:128186498-128186499|-/TC|frameshift_variant	65.46538089061403	0.16805504838372562	4				NaN	NaN	0	NaN	7719	3227	10945
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10949	29.539	NaN	13166	30	0	2006.2	0.106	+			43021	TEKSPEVTL	9	73	502.2682801698745	1002.522007406549	2	502.26910400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TEKSPEVTL_	ENSG00000096996|ENST00000593993|IL12RB1;IL12RB1|p.P237Hfs*5|1|0.35|ENSG00000096996|chr19:18073590-18073590|G/-|frameshift_variant;IL12RB1|p.Y481Lfs*8|1|0.07|ENSG00000096996|chr19:18066583-18066584|-/A|frameshift_variant;nc|ENSG00000096996|P42701-2|IL12RB1;nc|ENSG00000096996|P42701-3|IL12RB1	101.25262130126117	0.03792372629710479	4				NaN	NaN	0	NaN	7720	3227	10945
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10950	29.541	NaN	12723	30	0	1665.3	0.106	+			14759	GTKLPGLLK	9	78	463.80486843207194	925.5951839309439	2	463.8052673339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTKLPGLLK_	ENSG00000161204|ENST00000429586|ABCF3;ENST00000466416.1_1_3:183903995-183905333:+|nuORF;ENST00000478288.5_1_3:183903968-183905333:+|nuORF;ENST00000498136.5_1_3:183903995-183905550:+|nuORF;nc|ENSG00000161204|Q9NUQ8-2|ABCF3	62.107414245175825	0.1960472003779324	4				NaN	NaN	0	NaN	7721	3227	10945
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10951	29.542	NaN	10858	30	0	3265.5	0.106			+	18618	ISSLVGGNSN	10	66	474.24333293859985	946.4721129439997	2	474.2432556152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ISSLVGGNSN_	REV__ENSG00000104067|ENST00000614355|TJP1;REV__nc|ENSG00000104067|Q07157-2|TJP1;REV__nc|ENSG00000104067|Q07157|TJP1	69.6276240434122	0.2803623802747859	4				NaN	NaN	0	NaN	7722	3227	10945
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10952	29.544	NaN	5161	30	0	659.28	0.038	+			8947	EEYQRIYTT	9	80	601.7881869199092	1201.5618209066183	2	601.7889404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EEYQRIYTT_	AHNAK|p.I657Nfs*25|1|0.36|ENSG00000124942|chr11:62532447-62532448|-/T|frameshift_variant;AHNAK|p.K2311Rfs*11|1|0.33|ENSG00000124942|chr11:62527487-62527487|G/-|frameshift_variant;AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;AHNAK|p.L2124Ifs*37|1|0.04|ENSG00000124942|chr11:62528048-62528049|-/ATGCCTGATA|frameshift_variant;AHNAK|p.S1888Qfs*8|1|0.11|ENSG00000124942|chr11:62528755-62528756|-/G|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK	98.62937762414208	0.04060045538121712	4				NaN	NaN	0	NaN	7723	3227	10945
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10953	29.545	NaN	7826	30	0	3526.1	0.142	+			8795	EEKHPVSSPAP	11	74	589.2966669167463	1176.5787809002925	2	589.2984619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_EEKHPVSSPAP_	ENST00000264716.8_1_2:28616232-28616613:+|nuORF	32.75053402867276	0.6462648045997152	4				NaN	NaN	0	NaN	7724	3227	10945
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10967	29.575	NaN	23335	30	0	5820.4	0.214				-1	VRNGMASEG	9	79	468.71350500886206	935.4124570845241	2	468.7138366699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_VRNGM(Oxidation (M))ASEG_	ENSG00000146005|ENST00000274710|PSD2;PSD2|p.A211Qfs*25|1|0.28|ENSG00000146005|chr5:139813564-139813564|G/-|frameshift_variant;PSD2|p.D258Mfs*13|2|0.49|ENSG00000146005|chr5:139813703-139813703|G/-|frameshift_variant	35.61828744233558	0.47037581924408073	4				NaN	NaN	0	NaN	7735	3230	10966
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10968	29.579	NaN	14805	30	0	2301.5	0.106	+			14921	GTMAMTVVTK	10	77	519.7679670385529	1037.5213811439057	2	519.7698364257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTMAMTVVTK_	ENSG00000175115|ENST00000320580|PACS1;nc|ENSG00000175115|Q6VY07-2|PACS1	133.9934435666947	0.012355562819581703	4				NaN	NaN	0	NaN	7736	3230	10966
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10969	29.581	NaN	11911	30	0	1707.7	0.106	+			16996	HPSLQPEEY	9	79	550.2559655878938	1098.4973782425875	2	550.2567138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HPSLQPEEY_	ENSG00000135506|ENST00000315970|OS9;ENST00000549307.5_1_12:58089922-58109758:+|nuORF;ENST00000552787.5_1_12:58089581-58109758:+|nuORF;nc|ENSG00000135506|Q13438-2|OS9;nc|ENSG00000135506|Q13438-3|OS9;nc|ENSG00000135506|Q13438-4|OS9;nc|ENSG00000135506|Q13438-5|OS9;nc|ENSG00000135506|Q13438-6|OS9;nc|ENSG00000135506|Q13438-7|OS9;nc|ENSG00000135506|Q13438-8|OS9	85.16082228582465	0.07850854922700509	4				NaN	NaN	0	NaN	7737	3230	10966
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10970	29.583	NaN	13176	30	0	7479.3	0.106			+	26621	LVAGVGGI	8	66	343.2162566208694	684.4179603085388	2	343.2170715332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LVAGVGGI_	REV__tr|U7SJW1|U7SJW1_FUSNUFerrousirontransportproteinBOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02106PE=3SV=1	10.184766708764876	0.7843118145031319	4				NaN	NaN	0	NaN	7738	3230	10966
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10971	29.585	NaN	7999.2	30	0	1271.8	0.106				-1	NFFKMGMKL	9	65	377.86066467580264	1130.560164627608	3	377.86083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_NFFKM(Oxidation (M))GMKL_	ENSG00000010803|ENST00000695335|SCMH1;nc|ENSG00000010803|Q96GD3-2|SCMH1;nc|ENSG00000010803|Q96GD3-3|SCMH1;nc|ENSG00000010803|Q96GD3-4|SCMH1;nc|ENSG00000010803|Q96GD3-5|SCMH1;nc|ENSG00000010803|Q96GD3|SCMH1	51.33545320467046	0.2872990594074956	4				NaN	NaN	0	NaN	7739	3230	10966
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10972	29.586	NaN	27564	30	0	9665.6	0.035				-1	 	0	65	332.1936143896788	993.5590137692366	3	332.194091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7740	3230	10966
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10973	29.587	NaN	5617.6	30	0	1312.4	0.143				-1	SALECLLQRI	10	66	401.5565470322959	1201.6478116970877	3	401.5567932128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_SALEC(Carbamidomethyl (C))LLQRI_	ENSG00000197181|ENST00000356766|PIWIL2;nc|ENSG00000197181|Q8TC59-2|PIWIL2	27.047317107675042	0.6589519614906109	4				NaN	NaN	0	NaN	7741	3230	10966
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10991	29.626	NaN	22150	30	0	2888.4	0.214				-1	 	0	90	531.2425247530457	1060.4704965728913	2	531.24365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7756	3233	10990
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10992	29.63	NaN	9517.6	30	0	740.43	0.106			+	8793	EEKEEKKL	8	82	516.7816294210473	NaN	0	516.781982421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EEKEEKKL_	REV__ENSG00000161914|ENST00000293771|ZNF653;REV__ENST00000590548.5_1_19:11594499-11598073:-|nuORF	104.74654710444128	1.7418937515398478	4				NaN	NaN	0	NaN	7757	3233	10990
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10993	29.632	NaN	7687.4	30	0	668.87	0.106			+	-1	SSRAAIALGA	10	82	479.7686367590171	957.5227205848342	2	479.769287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SSRAAIALGA_	REV__ENST00000534141.5_1_11:82782877-82782961:-|nuORF	45.9519527083369	0.4943008177357963	4				NaN	NaN	0	NaN	7758	3233	10990
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10994	29.634	NaN	38230	30	0	9360.9	0.106				-1	 	0	91	601.277306476814	1200.540060020428	2	601.2780151367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7759	3233	10990
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10995	29.636	NaN	5743.5	30	0	711.66	0.106				-1	 	0	69	407.73657182505076	813.4585907169015	2	407.73699951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7760	3233	10990
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10996	29.637	NaN	1762.3	30	0	647.38	0.035			+	12351	GDLQLFRK	8	45	326.1902017851991	975.5487759557974	3	326.19073486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GDLQLFRK_	REV__ABCA13|p.A4442Pfs*3|1|0.06|ENSG00000179869|chr7:48506365-48506365|G/-|frameshift_variant;REV__ABCA13|p.E1535Lfs*6|1|0.06|ENSG00000179869|chr7:48274267-48274268|-/TTTAGGTTTCTTCTCT|frameshift_variant;REV__ABCA13|p.H2188Ifs*3|1|0.11|ENSG00000179869|chr7:48276226-48276226|C/-|frameshift_variant;REV__ABCA13|p.K1949Rfs*10|1|0.04|ENSG00000179869|chr7:48275509-48275510|-/TCGGG|frameshift_variant;REV__ABCA13|p.K3855Nfs*139|1|0.3|ENSG00000179869|chr7:48389131-48389153|GGCTGTGGTCCAAGACCTCAGCC/-|frameshift_variant;REV__ABCA13|p.L1248Tfs*2|1|0.16|ENSG00000179869|chr7:48273400-48273401|-/A|frameshift_variant;REV__ABCA13|p.N1764Tfs*18|1|0.33|ENSG00000179869|chr7:48274953-48274953|A/-|frameshift_variant;REV__ABCA13|p.P1447Tfs*22|1|0.49|ENSG00000179869|chr7:48273997-48273998|-/A|frameshift_variant;REV__ABCA13|p.S1533Lfs*16|1|0.1|ENSG00000179869|chr7:48274262-48274263|-/CT|frameshift_variant;REV__ENSG00000179869|ENST00000435803|ABCA13;REV__nc|ENSG00000179869|Q86UQ4-4|ABCA13;REV__nc|ENSG00000179869|Q86UQ4|ABCA13	34.172542307311794	0.6954784234644539	4				NaN	NaN	0	NaN	7761	3233	10990
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10997	29.638	NaN	3840.1	30	0	400.45	0.139	+			8462	EASGLSLHY	9	63	488.7399071324891	975.4652613317783	2	488.7401428222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EASGLSLHY_	ENSG00000101596|ENST00000320876|SMCHD1;nc|ENSG00000101596|A6NHR9-2|SMCHD1;SMCHD1|p.D1006Kfs*40|1|0.32|ENSG00000101596|chr18:2729370-2729371|-/AA|frameshift_variant;SMCHD1|p.D1006Tfs*39|2|0.32|ENSG00000101596|chr18:2729371-2729371|A/-|frameshift_variant	55.50420428727701	0.2510918378945873	4				NaN	NaN	0	NaN	7762	3233	10990
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11015	29.677	NaN	182120	30	0	19845	0.178				-1	 	0	104	616.8345826283154	1231.6546123234307	2	616.8353271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7777	3236	11014
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11016	29.68	NaN	98378	30	0	7921.7	0.106			+	22105	KSNCSSLSMGF	11	104	580.756009732625	1159.4974665320499	2	580.757568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KSNCSSLSMGF_	REV__ENST00000580335.1_1_18:67624287-67624371:-|nuORF	54.722347961057174	0.3705654281804646	4				NaN	NaN	0	NaN	7778	3236	11014
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11017	29.682	NaN	20364	30	0	7822.8	0.106	+			10597	EYLDRAEKL	9	87	568.8001078246908	1135.5856627161816	2	568.8011474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EYLDRAEKL_	ENSG00000119541|ENST00000238497|VPS4B;ENST00000591475.5_1_18:61064221-61089576:-|nuORF	150.36159442982594	0.006784847064083231	4				NaN	NaN	0	NaN	7779	3236	11014
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11018	29.684	NaN	16121	30	0	1502.8	0.106	+			475	AAVSTHVAL	9	71	434.7471386564259	867.4797243796518	2	434.7477722167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AAVSTHVAL_	ENSG00000163501|ENST00000295731|IHH;IHH|p.E379Rfs*18|2|0.25|ENSG00000163501|chr2:219055308-219055308|C/-|frameshift_variant;IHH|p.Q386Sfs*11|1|0.4|ENSG00000163501|chr2:219055287-219055287|G/-|frameshift_variant	94.00642277110589	0.05356993013874309	4				NaN	NaN	0	NaN	7780	3236	11014
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11019	29.686	NaN	29796	30	0	9705.9	0.106			+	-1	AGFPCKKICI	10	68	379.53623717461585	1135.5868821240476	3	379.5363464355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_AGFPCKKIC(Carbamidomethyl (C))I_	REV__ABCE1|p.L313Wfs*10|1|0.22|ENSG00000164163|chr4:145119941-145119941|T/-|frameshift_variant;REV__ENSG00000164163|ENST00000296577|ABCE1	30.317721548370564	0.6322445173429027	4				NaN	NaN	0	NaN	7781	3236	11014
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11020	29.688	NaN	47126	30	0	4430.3	0.106	+			7560	DHVTQEGLDE	10	108	381.50330810934935	1141.488094928248	3	381.5037841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DHVTQEGLDE_	ENSG00000107731|ENST00000335350|UNC5B;nc|ENSG00000107731|Q8IZJ1-2|UNC5B	44.377184641726394	0.5088115166961078	4				NaN	NaN	0	NaN	7782	3236	11014
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11021	29.689	NaN	9926.5	30	0	1506.2	0.036			+	23730	LAVRAPYVHG	10	89	541.8087214369625	1081.602889940725	2	541.8099975585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LAVRAPYVHG_	REV__nc|ENSG00000157193|Q14114-2|LRP8;REV__nc|ENSG00000157193|Q14114-3|LRP8	35.61828744233558	0.588957954432594	4				NaN	NaN	0	NaN	7783	3236	11014
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11039	29.727	NaN	55432	30	0	12278	0.214				-1	 	0	99	522.7583131346637	1043.5020733361273	2	522.75927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7798	3239	11038
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11040	29.731	NaN	35889	30	0	15146	0.106			+	39724	STISCFHKL	9	91	364.8545625909747	1091.5418583731241	3	364.85504150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_STISC(Carbamidomethyl (C))FHKL_	REV__ENSG00000165181|ENST00000682961|SHOC1;REV__nc|ENSG00000165181|Q5VXU9-3|SHOC1;REV__nc|ENSG00000165181|Q5VXU9|SHOC1	71.87747018426188	0.13267044672804276	4				NaN	NaN	0	NaN	7799	3239	11038
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11041	29.733	NaN	30286	30	0	4308.9	0.106	+			19139	IYNGKVTSI	9	81	497.78200464174034	NaN	0	497.7819519042969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IYNGKVTSI_	ENSG00000067596|ENST00000262415|DHX8;ENST00000587044.1_1_17:41568567-41594747:+|nuORF	120.8684288430529	0.001996491448359331	4				NaN	NaN	0	NaN	7800	3239	11038
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11042	29.735	NaN	11540	30	0	1361.1	0.106	+			38718	SSLDVSLQK	9	87	488.76887340985866	NaN	0	488.76885986328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSLDVSLQK_	CENPJ|p.L906*|1|0.48|ENSG00000151849|chr13:24904034-24904034|A/-|frameshift_variant;ENSG00000151849|ENST00000381884|CENPJ;nc|ENSG00000151849|Q9HC77-2|CENPJ	90.60085204095205	0.040385177724871185	4				NaN	NaN	0	NaN	7801	3239	11038
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11043	29.736	NaN	28651	30	0	3753	0.106	+			25399	LPKLCHAW	8	81	512.7740915880257	1023.5336302428515	2	512.7747802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_LPKLC(Carbamidomethyl (C))HAW_	ENSG00000141371|ENST00000269127|CHCT1	46.76643321282427	0.6143254112625767	4				NaN	NaN	0	NaN	7802	3239	11038
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11044	29.738	NaN	11812	30	0	1312.6	0.034			+	563	ADGLSKPRE	9	80	486.75855452070937	971.5025561082188	2	486.7589111328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ADGLSKPRE_	REV__ENSG00000197380|ENST00000391916|DACT3	66.42927471994793	0.16001998865088202	4				NaN	NaN	0	NaN	7803	3239	11038
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11045	29.739	NaN	22459	30	0	2849.7	0.139	+			17016	HPTSVISGY	9	81	480.742887311774	959.471221690348	2	480.74267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HPTSVISGY_	ENSG00000120438|ENST00000321394|TCP1;ENST00000412860.1_1_7:42834686-42835559:+|nuORF;TCP1|p.A232Gfs*7|1|0.05|ENSG00000120438|chr6:159784043-159784044|-/C|frameshift_variant	97.47269410471826	0.04379738608259218	4				NaN	NaN	0	NaN	7804	3239	11038
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11063	29.777	NaN	46073	30	0	21016	0.214				-1	 	0	85	468.7603935145409	935.5062340958818	2	468.76068115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7819	3242	11062
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11064	29.781	NaN	18982	30	0	4647.8	0.106			+	34139	RSVGVCVLP	9	76	465.26539609869553	928.5162392641911	2	465.263427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RSVGVCVLP_	REV__ENSG00000011566|ENST00000263881|MAP4K3;REV__nc|ENSG00000011566|Q8IVH8-2|MAP4K3;REV__nc|ENSG00000011566|Q8IVH8-3|MAP4K3	37.15910966729921	0.4535818937225704	4				NaN	NaN	0	NaN	7820	3242	11062
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11065	29.783	NaN	16705	30	0	2322.7	0.106	+			48179	VTADGALAMEK	11	84	553.2806124741096	1104.546672015019	2	553.2821044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTADGALAMEK_	ENSG00000058085|ENST00000264144|LAMC2;nc|ENSG00000058085|Q13753-2|LAMC2	197.79262163027192	3.1624506192132604E-08	4				NaN	NaN	0	NaN	7821	3242	11062
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11066	29.785	NaN	9298.6	30	0	1849.8	0.106	+			1434	AEYGPQGRAF	10	77	548.2640300272662	1094.5135071213324	2	548.2646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEYGPQGRAF_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	82.7504851949679	0.1731497355276012	4				NaN	NaN	0	NaN	7822	3242	11062
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11067	29.787	NaN	19470	30	0	1094.2	0.106	+			33217	RFKTQPVTF	9	91	562.3149039666123	1122.6152550000245	2	562.31689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RFKTQPVTF_	ENSG00000187479|ENST00000617612|C11orf96;nc|nan|Q7Z7L8|C11orf96	51.19269402634007	0.2889735674168909	4				NaN	NaN	0	NaN	7823	3242	11062
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11068	29.788	NaN	12018	30	0	1531.5	0.033	+			24079	LEKEVAAL	8	77	436.75747896908473	871.5004050049695	2	436.7578430175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LEKEVAAL_	ENSG00000196419|ENST00000360079|XRCC6;nc|ENSG00000196419|P12956-2|XRCC6;XRCC6|p.H486Pfs*12|1|0.12|ENSG00000196419|chr22:41658287-41658287|A/-|frameshift_variant;XRCC6|p.R403Afs*25|1|0.35|ENSG00000196419|chr22:41653603-41653603|C/-|frameshift_variant	98.62937762414208	0.25143494708580966	4				NaN	NaN	0	NaN	7824	3242	11062
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11069	29.789	NaN	7846.4	30	0	1421.2	0.143	+			35871	SEDRARASLVL	11	76	608.835354105884	1215.656155278568	2	608.8360595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SEDRARASLVL_	ENSG00000139192|ENST00000266556|TAPBPL;ENST00000539384.5_1_12:6560901-6571312:+|nuORF;ENST00000545700.5_1_12:6562264-6567817:+|nuORF;nc|ENSG00000139192|Q9BX59-2|TAPBPL;nc|ENSG00000139192|Q9BX59-3|TAPBPL;nc|ENSG00000139192|Q9BX59-4|TAPBPL;nc|ENSG00000139192|Q9BX59-5|TAPBPL;nc|ENSG00000139192|Q9BX59-6|TAPBPL;nc|ENSG00000139192|Q9BX59-7|TAPBPL	57.148748479083515	0.34890646465650643	4				NaN	NaN	0	NaN	7825	3242	11062
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11087	29.828	NaN	197790	30	0	73723	0.214	+			19197	IYTSSVNRL	9	87	526.7896352400486	1051.564717546897	2	526.7906494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IYTSSVNRL_	ENSG00000184432|ENST00000333188|COPB2;nc|ENSG00000184432|P35606-2|COPB2	132.757866228626	0.013877640931359021	4				NaN	NaN	0	NaN	7840	3245	11086
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11088	29.832	NaN	60481	30	0	23873	0.106				-1	CRETCNCQSG	10	97	579.2088078170611	1156.4030627009222	2	579.2100219726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_CRETCNC(Carbamidomethyl (C))QSG_	ENSG00000164283|ENST00000381405|ESM1	69.6276240434122	0.2803623802747859	4				NaN	NaN	0	NaN	7841	3245	11086
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11089	29.834	NaN	48740	30	0	13077	0.106	+			16799	HPDEKSIITY	10	95	601.805935850927	1201.5973187686538	2	601.8063354492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HPDEKSIITY_	ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1;SPTBN1|p.K503Rfs*24|1|0.06|ENSG00000115306|chr2:54626095-54626095|G/-|frameshift_variant	101.25262130126117	0.07397688119410509	4				NaN	NaN	0	NaN	7842	3245	11086
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11090	29.836	NaN	13447	30	0	1717	0.106				-1	RMAAEKHY	8	87	511.2474382291651	1020.4803235251302	2	511.75048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_RM(Oxidation (M))AAEKHY_	ENSG00000170264|ENST00000404929|FAM161A;nc|ENSG00000170264|Q3B820-2|FAM161A;nc|ENSG00000170264|Q3B820|FAM161A	57.81127852772723	0.5234495074909924	4				NaN	NaN	0	NaN	7843	3245	11086
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11091	29.837	NaN	12033	30	0	1508.2	0.106	+			50505	YANIGKTL	8	69	440.24973167505823	878.4849104169165	2	440.2501220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YANIGKTL_	ENSG00000115841|ENST00000354545|RMDN2;ENST00000440353.5_1_2:38177721-38224681:+|nuORF;nc|ENSG00000115841|Q96LZ7-2|RMDN2;nc|ENSG00000115841|Q96LZ7-3|RMDN2;nc|ENSG00000115841|Q96LZ7-4|RMDN2;RMDN2|p.F331Efs*33|1|0.12|ENSG00000115841|chr2:37997459-37997462|TGTT/-|frameshift_variant	107.00750918261382	0.24681273948614665	4				NaN	NaN	0	NaN	7844	3245	11086
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11092	29.839	NaN	14940	30	0	4606	0.035				-1	 	0	79	516.2791286886298	515.2718522220298	1	516.27978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7845	3245	11086
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11093	29.84	NaN	21172	30	0	2509.8	0.14	+			38467	SSASALTGLTK	11	95	518.287222586581	1034.559892239962	2	518.28759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSASALTGLTK_	ENSG00000164880|ENST00000404767|INTS1;INTS1|p.Q467Afs*140|1|0.05|ENSG00000164880|chr7:1498439-1498440|-/A|frameshift_variant;INTS1|p.R843Pfs*31|1|0.39|ENSG00000164880|chr7:1487438-1487439|-/G|frameshift_variant	99.78786539795823	0.061125669442822994	4				NaN	NaN	0	NaN	7846	3245	11086
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11111	29.877	NaN	54360	30	0	14352	0.214	+			37653	SLQREGLSP	9	88	493.766793339103	985.519033745006	2	493.7667541503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLQREGLSP_	ENSG00000151006|ENST00000280606|PRSS53;ENST00000533518.5_3_16:31095113-31102425:-|nuORF;PRSS53|p.V111Wfs*148|1|0.27|ENSG00000151006|chr16:31086810-31086810|C/-|frameshift_variant	61.691277971877994	0.19951612995419254	4				NaN	NaN	0	NaN	7861	3248	11110
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11112	29.881	NaN	20126	30	0	15209	0.106	+			303	AAPGPHVAL	9	62	416.73696906704953	831.4593852008991	2	416.7373352050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAPGPHVAL_	ENSG00000156381|ENST00000286918|ANKRD9	116.12168088208365	0.02354759995895761	4				NaN	NaN	0	NaN	7862	3248	11110
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11113	29.883	NaN	14790	30	0	2492.6	0.106	+			5669	AVDSQILPK	9	78	485.78198675957265	969.5494205859453	2	485.78155517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVDSQILPK_	ENSG00000089009|ENST00000202773|RPL6;ENST00000456481.1_1_7:137407104-137407545:+|nuORF;ENST00000489915.1_1_18:6462145-6462637:-|nuORF	117.81106730687013	0.02252488733980868	4				NaN	NaN	0	NaN	7863	3248	11110
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11114	29.885	NaN	6131.4	30	0	949.28	0.106			+	48519	VTNKVIVS	8	66	430.2654554347247	858.5163579362494	2	430.2658386230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTNKVIVS_	REV__ENSG00000143373|ENST00000336715|ZNF687;REV__nc|ENSG00000143373|Q8N1G0-2|ZNF687;REV__ZNF687|p.A639Pfs*74|1|0.27|ENSG00000143373|chr1:151288202-151288202|G/-|frameshift_variant;REV__ZNF687|p.H733Mfs*30|1|0.58|ENSG00000143373|chr1:151288603-151288603|C/-|frameshift_variant;REV__ZNF687|p.P960Lfs*23|1|0.3|ENSG00000143373|chr1:151289915-151289915|G/-|frameshift_variant;REV__ZNF687|p.R871Gfs*29|1|0.1|ENSG00000143373|chr1:151289512-151289512|A/-|frameshift_variant;REV__ZNF687|p.R939Vfs*10|1|0.08|ENSG00000143373|chr1:151289852-151289852|C/-|frameshift_variant	63.30626980617807	0.4690498839812213	4				NaN	NaN	0	NaN	7864	3248	11110
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11115	29.887	NaN	6154.2	30	0	601.65	0.106	+			11750	FSHQGVQL	8	72	458.23716413672537	914.4597753402508	2	458.2375793457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FSHQGVQL_	ENSG00000106263|ENST00000360876|EIF3B;ENST00000463026.5_1_7:2404000-2406084:+|nuORF;nc|ENSG00000106263|P55884-2|EIF3B	54.776311868738084	0.5534952410049249	4				NaN	NaN	0	NaN	7865	3248	11110
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11116	29.888	NaN	6336.7	30	0	2386.2	0.036				-1	 	0	61	353.91397565257427	1058.7200975579228	3	353.9142761230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7866	3248	11110
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11117	29.889	NaN	9906.1	30	0	1749.7	0.14			+	18163	ILQSNIPPN	9	68	498.279338252657	994.544123572114	2	498.77728271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ILQSNIPPN_	REV__tr|U7T1Q1|U7T1Q1_FUSNUAutotransporterdomain-containingprotein(Fragment)OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00530PE=4SV=1	36.446750945000026	0.4619375763483977	4				NaN	NaN	0	NaN	7867	3248	11110
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11134	29.926	NaN	9242.1	30	0	3772.9	0.214	+			12226	GASDVVLYK	9	68	476.25956138959424	950.5045698459885	2	476.2608947753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GASDVVLYK_	ENSG00000116120|ENST00000281828|FARSB;FARSB|p.I265*|1|0.36|ENSG00000116120|chr2:222630168-222630168|T/-|frameshift_variant;FARSB|p.I364Nfs*7|1|0.04|ENSG00000116120|chr2:222624353-222624354|-/AACACTCCTTATTG|frameshift_variant	107.00750918261382	0.032051501805654005	4				NaN	NaN	0	NaN	7881	3251	11133
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11135	29.93	NaN	13345	30	0	3101.3	0.106	+			19177	IYTKGTPEI	9	79	511.28179256838985	NaN	0	511.28216552734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IYTKGTPEI_	ENSG00000156011|ENST00000327040|PSD3;nc|ENSG00000156011|Q9NYI0|PSD3;PSD3|p.D956Rfs*11|1|0.17|ENSG00000156011|chr8:18556274-18556275|-/G|frameshift_variant;PSD3|p.D956Tfs*14|1|0.29|ENSG00000156011|chr8:18556275-18556275|G/-|frameshift_variant;PSD3|p.F625Lfs*6|1|0.25|ENSG00000156011|chr8:18804557-18804557|A/-|frameshift_variant;PSD3|p.L776Wfs*44|1|0.35|ENSG00000156011|chr8:18632699-18632699|A/-|frameshift_variant;PSD3|p.V655Efs*3|1|0.1|ENSG00000156011|chr8:18801329-18801330|-/CT|frameshift_variant	90.77665401227738	0.04003078172695098	4				NaN	NaN	0	NaN	7882	3251	11133
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11136	29.932	NaN	10645	30	0	1209.9	0.106	+			20426	KETTGIVSM	9	76	483.2525526186136	964.4905523040272	2	483.25250244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KETTGIVSM_	ENSG00000136631|ENST00000644510|VPS45;ENST00000460366.5_1_1:150039914-150049098:+|nuORF;ENST00000497638.2_1_1:150039914-150048408:+|nuORF	69.6276240434122	0.14239879520340665	4				NaN	NaN	0	NaN	7883	3251	11133
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11137	29.933	NaN	16222	30	0	2681.8	0.106			+	27205	MEGSRINN	8	81	468.71350500886206	935.4124570845241	2	468.7142028808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_M(Oxidation (M))EGSRINN_	REV__ENSG00000099949|ENST00000646124|LZTR1;REV__ENST00000479606.5_1_22:21333956-21351634:+|nuORF;REV__ENST00000492480.1_1_22:21346070-21348237:+|nuORF	47.91560031466742	0.6071945918984287	4				NaN	NaN	0	NaN	7884	3251	11133
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11138	29.935	NaN	7581.2	30	0	469.38	0.106	+			700	AEALVSKGL	9	81	444.2633532114304	886.5121534896608	2	444.2635803222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEALVSKGL_	ENSG00000197157|ENST00000354725|SND1;GAS2L3-SND1|1|fusion;SND1|p.A514Qfs*156|1|0.37|ENSG00000197157|chr7:127929195-127929195|A/-|frameshift_variant	78.26377905018397	0.10505600812668463	4				NaN	NaN	0	NaN	7885	3251	11133
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11139	29.937	NaN	6533.1	30	0	694.59	0.037	+			19878	KEEQFKQVF	9	84	591.8122223104966	1181.6098916877932	2	591.8126220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KEEQFKQVF_	ENSG00000168090|ENST00000303904|COPS6;ENST00000496358.1_1_7:99686670-99688376:+|nuORF	114.85826248499774	0.024312442104607014	4				NaN	NaN	0	NaN	7886	3251	11133
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11140	29.938	NaN	18969	30	0	6544	0.141	+			14215	GSSGSFYLK	9	83	473.23714442461926	944.4597359160385	2	473.2373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GSSGSFYLK_	ENSG00000129422|ENST00000693296|MTUS1;ENST00000518975.1_1_8:17566427-17579410:-|nuORF;nc|ENSG00000129422|Q9ULD2-2|MTUS1;nc|ENSG00000129422|Q9ULD2-6|MTUS1	104.0567914643314	0.03506238181059741	4				NaN	NaN	0	NaN	7887	3251	11133
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11156	29.972	NaN	20820	30	0	1960.5	0.214	+			50410	YAAQASQAL	9	71	461.7348865506473	921.4552201680946	2	461.7349548339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YAAQASQAL_	ENSG00000118705|ENST00000237530|RPN2;ENST00000462163.1_1_20:35807747-35832332:+|nuORF;RPN2|p.G196Afs*41|1|0.12|ENSG00000118705|chr20:37204794-37204794|G/-|frameshift_variant	131.03138772384656	0.014687601201650916	4				NaN	NaN	0	NaN	7900	3254	11155
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11157	29.976	NaN	38186	30	0	13137	0.106	+			46847	VIFTGGVGK	9	83	439.26027688208427	876.5060008309686	2	439.2607727050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VIFTGGVGK_	ENSG00000134255|ENST00000357172|CEPT1;ENST00000473474.5_1_1:111715860-111726929:+|nuORF	104.0567914643314	0.03506238181059741	4				NaN	NaN	0	NaN	7901	3254	11155
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11158	29.977	NaN	11856	30	0	1643.5	0.106	+			25525	LPTENVDKM	9	75	523.7620567945568	1045.5095606559134	2	523.7633056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LPTENVDKM_	ENSG00000198420|ENST00000479870|TCAF1;ENST00000392900.3_1_7:143551228-143582358:-|nuORF;ENST00000414990.2_3_7:143295168-143301929:+|nuORF;nc|ENSG00000198420|Q9Y4C2-2|TCAF1	120.30596017624542	0.02101454110788768	4				NaN	NaN	0	NaN	7902	3254	11155
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11159	29.979	NaN	14690	30	0	1420.9	0.106	+			37034	SIQVVVVQK	9	79	500.31303245710154	998.6115119810031	2	500.3133239746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SIQVVVVQK_	ENSG00000197702|ENST00000334956|PARVA;ENST00000533345.5_1_11:12419899-12534890:+|nuORF	76.16968421966216	0.11411088698345859	4				NaN	NaN	0	NaN	7903	3254	11155
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11160	29.981	NaN	8259.4	30	0	631.97	0.106	+			36810	SIEGPSQAKI	10	80	515.2834662409784	1028.5523795487568	2	515.2835693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SIEGPSQAKI_	ENSG00000128591|ENST00000325888|FLNC;FLNC|p.A1081Rfs*17|1|0.11|ENSG00000128591|chr7:128844701-128844701|C/-|frameshift_variant;FLNC|p.H2471Tfs*58|1|0.18|ENSG00000128591|chr7:128856767-128856767|C/-|frameshift_variant;FLNC|p.R1426Gfs*12|1|0.33|ENSG00000128591|chr7:128846887-128846887|G/-|frameshift_variant;FLNC|p.V1896Wfs*57|1|0.04|ENSG00000128591|chr7:128851472-128851472|G/-|frameshift_variant;nc|ENSG00000128591|Q14315-2|FLNC	54.722347961057174	0.4138398245444204	4				NaN	NaN	0	NaN	7904	3254	11155
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11161	29.983	NaN	10909	30	0	3366.9	0.036	+			45948	VASHPQCTLC	10	80	529.7434132988938	1057.4722736645874	2	529.7452392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VASHPQCTLC_	ENST00000551077.1_1_15:25309923-25312611:+|nuORF	34.172542307311794	0.6007644933930345	4				NaN	NaN	0	NaN	7905	3254	11155
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11162	29.984	NaN	4383.8	30	0	685.64	0.139	+			42089	SYGQQSSF	8	66	452.195281360059	902.3760097869181	2	452.1959228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SYGQQSSF_	ENSG00000182944|ENST00000397938|EWSR1;ENST00000479135.5_1_22:29673993-29684776:+|nuORF;ENST00000483415.5_1_22:29664325-29684776:+|nuORF;EWSR1|p.M605Hfs*40|1|0.09|ENSG00000182944|chr22:29299731-29299732|-/C|frameshift_variant;EWSR1|p.M605Tfs*41|1|0.09|ENSG00000182944|chr22:29299733-29299734|-/CCTC|frameshift_variant;EWSR1|p.P622Lfs*4|1|0.39|ENSG00000182944|chr22:29299775-29299775|G/-|frameshift_variant;nc|ENSG00000182944|Q01844-3|EWSR1;nc|ENSG00000182944|Q01844-4|EWSR1;nc|ENSG00000182944|Q01844-5|EWSR1;nc|ENSG00000182944|Q01844-6|EWSR1	73.97473282117947	0.3737790450121076	4				NaN	NaN	0	NaN	7906	3254	11155
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11178	30.019	NaN	62518	30	0	8105.1	0.213	+			6025	AVMEMMSQK	9	97	527.7392835633212	1053.4640141934424	2	527.7409057617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVMEMMSQK_	ENSG00000123349|ENST00000334478|PFDN5;ENST00000552341.5_1_12:53691573-53693126:+|nuORF;nc|ENSG00000123349|Q99471-3|PFDN5	136.26810882979174	0.012230845423532208	4				NaN	NaN	0	NaN	7919	3257	11177
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11179	30.022	NaN	8920	30	0	1650.6	0.106	+			50843	YETQVKVM	8	71	499.2538185511592	996.4930841691184	2	499.2549133300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YETQVKVM_	ENSG00000120948|ENST00000240185|TARDBP;nc|ENSG00000120948|Q13148-4|TARDBP	84.9155231211612	0.2928622555056503	4				NaN	NaN	0	NaN	7920	3257	11177
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11180	30.024	NaN	6325.2	30	0	1012.3	0.106	+			16122	HDVVVENNL	9	70	519.7641715435478	1037.5137901538956	2	519.7650146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HDVVVENNL_	ENSG00000163918|ENST00000296273|RFC4	60.11826168202944	0.21262886028301267	4				NaN	NaN	0	NaN	7921	3257	11177
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11181	30.026	NaN	13096	30	0	1313.8	0.106			+	35682	SDHYAVINA	9	84	495.23757082644823	988.4605887196965	2	495.23822021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SDHYAVINA_	REV__ENSG00000126261|ENST00000246548|UBA2;REV__ENST00000592841.5_1_19:34919394-34922879:+|nuORF	44.116797842482775	0.37197099687881774	4				NaN	NaN	0	NaN	7922	3257	11177
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11182	30.028	NaN	12359	30	0	1951.4	0.106	+			18478	ISFPATGCQK	10	77	554.7762867140801	1107.5380204949602	2	554.7775268554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_ISFPATGC(Carbamidomethyl (C))QK_	ENSG00000137154|ENST00000380394|RPS6	114.8945686534367	0.03454040281423369	4				NaN	NaN	0	NaN	7923	3257	11177
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11183	30.03	NaN	9677.4	30	0	1321.8	0.036	+			5204	ATTSNFTFSK	10	77	552.2722181621557	1102.5298833911113	2	552.27294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATTSNFTFSK_	ENSG00000160294|ENST00000291688|MCM3AP;MCM3AP|p.K492Efs*5|1|0.29|ENSG00000160294|chr21:46280545-46280546|-/C|frameshift_variant	47.227680397652996	0.4825456260682108	4				NaN	NaN	0	NaN	7924	3257	11177
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11184	30.03	NaN	6405	30	0	701.46	0.139	+			18643	ISTNSHPIL	9	72	491.27234362710794	980.5301343210159	2	491.2720642089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ISTNSHPIL_	ENSG00000138081|ENST00000403359|FBXO11;nc|ENSG00000138081|Q86XK2-5|FBXO11;nc|ENSG00000138081|Q86XK2-6|FBXO11	107.00750918261382	0.032051501805654005	4				NaN	NaN	0	NaN	7925	3257	11177
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11202	30.069	NaN	48609	30	0	5273.9	0.214				-1	 	0	76	436.27106865861003	870.5275843840201	2	436.271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7940	3260	11201
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11203	30.073	NaN	22410	30	0	6615	0.106	+			15732	GVSAAFAVK	9	69	425.2444106032196	848.4742682732392	2	425.2448425292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GVSAAFAVK_	BZW1|p.L189P|1|0.05|ENSG00000082153|chr2:200818001-200818001|T/C|missense_variant;BZW1|p.N285Tfs*11|2|0.26|ENSG00000082153|chr2:200818782-200818782|A/-|frameshift_variant;BZW1|p.N286*|1|0.04|ENSG00000082153|chr2:200818790-200818791|-/T|frameshift_variant;BZW1|p.S325Rfs*19|1|0.04|ENSG00000082153|chr2:200819989-200819990|-/ACAATATAGAA|frameshift_variant;ENSG00000082153|ENST00000409600|BZW1;nc|ENSG00000082153|Q7L1Q6-2|BZW1;nc|ENSG00000082153|Q7L1Q6-3|BZW1;nc|ENSG00000082153|Q7L1Q6-4|BZW1	134.81075121484326	0.012914550297035062	4				NaN	NaN	0	NaN	7941	3260	11201
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11204	30.075	NaN	28535	30	0	5119.1	0.106	+			37423	SLGQLSSSRA	10	85	503.27086566508916	1004.5271783969783	2	503.2716369628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLGQLSSSRA_	ENSG00000146410|ENST00000420702|MTFR2	104.01359247289065	0.06577755598965461	4				NaN	NaN	0	NaN	7942	3260	11201
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11205	30.076	NaN	8434.1	30	0	1411.5	0.106	+			40475	STWEGIQAGK	10	76	538.7713220691819	1075.5280912051637	2	538.7724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STWEGIQAGK_	ENSG00000177156|ENST00000319006|TALDO1;ENST00000530119.5_1_11:747481-760254:+|nuORF;ENST00000533796.1_1_11:755745-760254:+|nuORF;nc|ENSG00000177156|P37837-2|TALDO1	65.15724298150197	0.31893571707528906	4				NaN	NaN	0	NaN	7943	3260	11201
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11206	30.078	NaN	11466	30	0	1380.2	0.106	+			50977	YILCCLFF	8	80	511.2474382291651	1020.4803235251302	2	511.2461853027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YILCCLFF_	ENST00000508935.1_1_5:102509572-102509677:+|nuORF	80.99701575658668	0.31526608040172566	4				NaN	NaN	0	NaN	7944	3260	11201
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11207	30.08	NaN	9314.5	30	0	1733.7	0.033	+			41908	SVVGGLAVGK	10	74	443.7709875557008	885.5274221782016	2	443.771240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVVGGLAVGK_	ENSG00000103249|ENST00000382745|CLCN7;ENST00000563822.1_1_16:1505719-1509320:-|nuORF;ENST00000564968.1_1_16:1507514-1509320:-|nuORF;nc|ENSG00000103249|P51798-2|CLCN7;RBCK1-CLCN7|1|fusion;RBCK1-CLCN7|2|fusion	65.46538089061403	0.31613324008013116	4				NaN	NaN	0	NaN	7945	3260	11201
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11208	30.08	NaN	16458	30	0	2979.2	0.142	+			49785	VYRQDCETF	9	86	580.756009732625	1159.4974665320499	2	580.756103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VYRQDCETF_	ENSG00000134283|ENST00000358314|PPHLN1;nc|ENSG00000134283|Q8NEY8-2|PPHLN1;nc|ENSG00000134283|Q8NEY8-3|PPHLN1;nc|ENSG00000134283|Q8NEY8-6|PPHLN1;nc|ENSG00000134283|Q8NEY8-9|PPHLN1;nc|ENSG00000134283|Q8NEY8|PPHLN1;PPHLN1|p.D323Ifs*4|1|0.17|ENSG00000134283|chr12:42441367-42441367|A/-|frameshift_variant	112.41091882917199	0.026537921851008135	4				NaN	NaN	0	NaN	7946	3260	11201
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11224	30.116	NaN	47292	30	0	9220.3	0.214	+			49278	VVQEPGQVFK	10	92	565.8131800212474	1129.6118071092947	2	565.8140258789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVQEPGQVFK_	ENSG00000169180|ENST00000304658|XPO6;ENST00000570007.1_1_16:28117306-28117714:-|nuORF;nc|ENSG00000169180|Q96QU8-2|XPO6;XPO6|p.P1120Lfs*4|1|0.28|ENSG00000169180|chr16:28098557-28098557|G/-|frameshift_variant	109.43880257439609	0.049666173740610824	4				NaN	NaN	0	NaN	7959	3263	11223
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11225	30.119	NaN	33476	30	0	6222.8	0.106	+			5101	ATSPALFNR	9	85	488.7635731875757	975.5125934419514	2	488.7638244628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATSPALFNR_	DYNC1H1|p.K3112Hfs*3|1|0.31|ENSG00000197102|chr14:102027998-102027999|-/TCACAAG|frameshift_variant;DYNC1H1|p.R3078W|1|0.11|ENSG00000197102|chr14:102027802-102027802|C/T|missense_variant;DYNC1H1|p.W4201Gfs*43|1|0.42|ENSG00000197102|chr14:102043958-102043958|G/-|frameshift_variant;ENSG00000197102|ENST00000360184|DYNC1H1	116.90359126533652	0.02307425081617795	4				NaN	NaN	0	NaN	7960	3263	11223
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11226	30.121	NaN	16762	30	0	4136.7	0.106	+			38490	SSATLNSIVAK	11	84	545.8073690541396	1089.600185175079	2	545.8088989257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSATLNSIVAK_	ENSG00000007944|ENST00000356840|MYLIP;MYLIP|p.K199Rfs*26|1|0.07|ENSG00000007944|chr6:16143150-16143151|-/GAATT|frameshift_variant;MYLIP|p.R317Kfs*8|1|0.09|ENSG00000007944|chr6:16145014-16145015|-/A|frameshift_variant	139.15298810987372	0.0005758918642827448	4				NaN	NaN	0	NaN	7961	3263	11223
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11227	30.123	NaN	12399	30	0	1726.3	0.106			+	10665	EYRRRTSA	8	83	519.7760976914079	1037.5376424496158	2	519.7770385742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EYRRRTSA_	REV__ENSG00000128829|ENST00000263791|EIF2AK4;REV__nc|ENSG00000128829|Q9P2K8-2|EIF2AK4	51.33545320467046	0.5859736979383976	4				NaN	NaN	0	NaN	7962	3263	11223
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11228	30.125	NaN	11074	30	0	3529.4	0.106				-1	NVRCESEVF	9	87	570.2615769609823	NaN	0	570.261474609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_NVRC(Carbamidomethyl (C))ESEVF_	ENSG00000079999|ENST00000171111|KEAP1	63.53385203322761	0.134247007536971	4				NaN	NaN	0	NaN	7963	3263	11223
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11229	30.127	NaN	12238	30	0	2655.3	0.034	+			15037	GTNPFATVK	9	76	467.7529886434718	933.4914243537436	2	467.7529602050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTNPFATVK_	ENSG00000128298|ENST00000381669|BAIAP2L2;nc|ENSG00000128298|Q6UXY1-2|BAIAP2L2	91.26522074875469	0.06129826844580791	4				NaN	NaN	0	NaN	7964	3263	11223
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11230	30.127	NaN	15493	30	0	5122.2	0.139	+			24864	LKEMPVNK	8	79	479.77330622117273	957.5320595091455	2	480.27935791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LKEMPVNK_	tr|U7T661|U7T661_FUSNUWingedhelix-turn-helixtranscriptionalregulatorOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00118PE=4SV=1	82.30502934623384	0.30436709589983096	4				NaN	NaN	0	NaN	7965	3263	11223
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11243	30.156	NaN	74197	30	0	13594	0.214	+			10496	EVSKIVQTY	9	91	533.792225995063	1065.5698990569258	2	533.7928466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EVSKIVQTY_	ENSG00000072110|ENST00000394419|ACTN1;nc|ENSG00000072110|P12814-2|ACTN1;nc|ENSG00000072110|P12814-4|ACTN1;nc|ENSG00000072110|P12814|ACTN1	186.41076107051632	0.0006524797715399015	4				NaN	NaN	0	NaN	7975	3266	11242
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11244	30.16	NaN	51630	30	0	11427	0.106	+			48301	VTEGSFVYK	9	88	515.2658069743131	1028.5170610154262	2	515.2661743164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTEGSFVYK_	ENSG00000057608|ENST00000380191|GDI2;GDI2|p.S222Afs*20|1|0.1|ENSG00000057608|chr10:5785197-5785197|T/-|frameshift_variant	154.1183686248401	0.005909203230691971	4				NaN	NaN	0	NaN	7976	3266	11242
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11245	30.162	NaN	10729	30	0	768.17	0.106	+			26233	LSSPALGQLP	10	74	491.78152881585623	981.5485046985125	2	491.7817077636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSSPALGQLP_	ENST00000561730.1_1_16:58541858-58542949:+|nuORF	62.107414245175825	0.3466735403679669	4				NaN	NaN	0	NaN	7977	3266	11242
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11246	30.164	NaN	10123	30	0	1047.9	0.106			+	19169	IYRPGPNL	8	75	465.26539609869553	928.5162392641911	2	465.2659606933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IYRPGPNL_	REV__ENSG00000162687|ENST00000294725|KCNT2;REV__ENST00000498426.5_1_1:196286396-196434478:-|nuORF;REV__ENST00000610076.1_1_1:196227273-196577439:-|nuORF;REV__nc|ENSG00000162687|Q6UVM3-2|KCNT2;REV__nc|ENSG00000162687|Q6UVM3-3|KCNT2;REV__nc|ENSG00000162687|Q6UVM3-4|KCNT2	40.5726180659479	0.6527593143185008	4				NaN	NaN	0	NaN	7978	3266	11242
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11247	30.165	NaN	9802.4	30	0	2107.5	0.106	+			4687	ATLSICSPK	9	69	460.2490831585451	918.4836133838902	2	460.2492370605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATLSICSPK_	ENSG00000121060|ENST00000316881|TRIM25;ENST00000572021.5_1_17:54969063-54989474:-|nuORF;TRIM25|p.G621D|1|0.15|ENSG00000121060|chr17:56891731-56891731|C/T|missense_variant	90.60085204095205	0.06317133949006545	4				NaN	NaN	0	NaN	7979	3266	11242
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11248	30.167	NaN	14982	30	0	2444.6	0.037	+			43745	TLCPNGRQET	10	90	373.5133575740966	1117.5182433224898	3	373.5135803222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TLCPNGRQET_	ENST00000565167.1_1_15:41809585-41809717:-|nuORF	29.170058357718403	0.6416167986984785	4				NaN	NaN	0	NaN	7980	3266	11242
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11249	30.168	NaN	9770.8	30	0	5010.2	0.135				-1	 	0	63	343.19844758882914	684.3823422444583	2	343.1988220214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7981	3266	11242
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11263	30.198	NaN	66530	30	0	25037	0.21	+			42176	SYTSVKENF	9	107	537.7582360280143	1073.5019191228284	2	537.7597045898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SYTSVKENF_	ENSG00000112584|ENST00000476287|FAM120B;FAM120B|p.Y298Ifs*24|1|0.3|ENSG00000112584|chr6:170318277-170318277|T/-|frameshift_variant;nc|ENSG00000112584|Q96EK7-2|FAM120B	120.8684288430529	0.02067403653475984	4				NaN	NaN	0	NaN	7992	3269	11262
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11264	30.202	NaN	50011	30	0	5720.8	0.106	+			30697	QDAKMAGIGI	10	100	502.26580401191103	NaN	0	502.2660827636719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QDAKMAGIGI_	CON__P19012	77.31757898189308	0.11266207027252037	4				NaN	NaN	0	NaN	7993	3269	11262
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11265	30.204	NaN	20934	30	0	1692.9	0.106	+			8565	EAWASKDATY	10	94	571.2611143705053	1140.5076758078105	2	571.2625732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EAWASKDATY_	ENSG00000166508|ENST00000303887|MCM7;nc|ENSG00000166508|P33993-3|MCM7	160.8219353732433	0.006574023344242491	4				NaN	NaN	0	NaN	7994	3269	11262
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11266	30.205	NaN	15540	30	0	2375.9	0.106	+			5373	ATYAPVISAEK	11	97	575.3103330867964	1148.6061132403927	2	575.311767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATYAPVISAEK_	ENSG00000075886|ENST00000321253|TUBA3D;ENSG00000123416|ENST00000336023|TUBA1B;ENSG00000127824|ENST00000248437|TUBA4A;ENSG00000152086|ENST00000312988|TUBA3E;ENSG00000167552|ENST00000301071|TUBA1A;ENSG00000167553|ENST00000301072|TUBA1C;ENSG00000198033|ENST00000400113|TUBA3C;ENST00000530835.1_1_11:90015825-90016947:+|nuORF;nc|ENSG00000123416|P68363-2|TUBA1B;nc|ENSG00000127824|P68366-2|TUBA4A;nc|ENSG00000167552|Q71U36-2|TUBA1A;nc|ENSG00000198033|P0DPH7-2|TUBA3C;TUBA3C|p.T361Rfs*18|1|0.17|ENSG00000198033|chr13:19174136-19174136|G/-|frameshift_variant;TUBA3D|p.G366Efs*13|1|0.17|ENSG00000075886|chr2:131482588-131482588|G/-|frameshift_variant;TUBA3D|p.V328Pfs*54|1|0.45|ENSG00000075886|chr2:131480665-131480666|-/CCCAAAGA|frameshift_variant	65.15724298150197	0.2774196309614691	4				NaN	NaN	0	NaN	7995	3269	11262
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11267	30.207	NaN	14516	30	0	1250.3	0.106	+			36865	SIFRTPISK	9	91	524.8107086071769	1047.6068642811538	2	524.8120727539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SIFRTPISK_	ASPM|p.I1717Nfs*24|1|0.43|ENSG00000066279|chr1:197104101-197104102|-/T|frameshift_variant;ASPM|p.I3229Nfs*2|1|0.48|ENSG00000066279|chr1:197090339-197090340|-/T|frameshift_variant;ASPM|p.K671Nfs*3|1|0.21|ENSG00000066279|chr1:197139780-197139780|T/-|frameshift_variant;ASPM|p.L1872Ffs*24|1|0.43|ENSG00000066279|chr1:197103635-197103636|-/A|frameshift_variant;ASPM|p.M2261*|1|0.44|ENSG00000066279|chr1:197102470-197102470|T/-|frameshift_variant;ASPM|p.N1062Rfs*28|1|0.1|ENSG00000066279|chr1:197124311-197124315|TAAGT/-|frameshift_variant;ASPM|p.N1680Kfs*11|1|0.33|ENSG00000066279|chr1:197104211-197104212|-/T|frameshift_variant;ASPM|p.Q2620Nfs*22|1|0.15|ENSG00000066279|chr1:197101393-197101394|-/TT|frameshift_variant;ASPM|p.Q2620Tfs*17|1|0.19|ENSG00000066279|chr1:197101393-197101394|-/T|frameshift_variant;ENSG00000066279|ENST00000367409|ASPM;nc|ENSG00000066279|Q8IZT6-2|ASPM	90.60085204095205	0.06317133949006545	4				NaN	NaN	0	NaN	7996	3269	11262
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11268	30.209	NaN	11803	30	0	1974.5	0.036	+			38491	SSATLNSIVAK	11	81	545.8073690541396	1089.600185175079	2	545.3011474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSATLNSIVAK_	ENSG00000007944|ENST00000356840|MYLIP;MYLIP|p.K199Rfs*26|1|0.07|ENSG00000007944|chr6:16143150-16143151|-/GAATT|frameshift_variant;MYLIP|p.R317Kfs*8|1|0.09|ENSG00000007944|chr6:16145014-16145015|-/A|frameshift_variant	63.42647028704847	0.292869158926425	4				NaN	NaN	0	NaN	7997	3269	11262
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11269	30.21	NaN	47807	30	0	7152.6	0.14	+			8191	EAAVAIKAM	9	88	452.25148401140024	902.4884150896005	2	452.2519836425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EAAVAIKAM_	ENSG00000132507|ENST00000336458|EIF5A;ENSG00000253626|ENST00000520547|EIF5AL1;nc|ENSG00000132507|P63241-2|EIF5A	176.41073772950895	0.0016726359177844747	4				NaN	NaN	0	NaN	7998	3269	11262
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11284	30.242	NaN	59778	30	0	13648	0.214				-1	 	0	94	572.3394147627286	1142.664276592257	2	572.3404541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8010	3272	11283
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11285	30.246	NaN	31509	30	0	15307	0.106				-1	 	0	77	414.252292811537	826.490032689874	2	414.25274658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8011	3272	11283
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11286	30.248	NaN	27541	30	0	2197.6	0.106				-1	 	0	100	523.2973535907366	1044.5801542482732	2	523.298095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8012	3272	11283
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11287	30.249	NaN	12068	30	0	2539.9	0.106	+			16969	HPQPTQVQF	9	79	541.2741465386615	1080.533740144123	2	541.275146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HPQPTQVQF_	ENSG00000172534|ENST00000310441|HCFC1;HCFC1|p.P1894Lfs*22|1|0.06|ENSG00000172534|chrX:153950835-153950835|G/-|frameshift_variant;nc|ENSG00000172534|P51610-2|HCFC1;nc|ENSG00000172534|P51610-4|HCFC1	58.22992032128504	0.22837015374068087	4				NaN	NaN	0	NaN	8013	3272	11283
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11288	30.251	NaN	13059	30	0	1170.1	0.106			+	29444	PCKLMQVAL	9	87	501.77663039402194	NaN	0	501.7767028808594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PCKLMQVAL_	REV__ENST00000308406.9_1_17:19284741-19284873:+|nuORF	53.351449002276354	0.18359631779194618	4				NaN	NaN	0	NaN	8014	3272	11283
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11289	30.253	NaN	9566.8	30	0	1307	0.036			+	6596	AYMDLPSMK	9	78	528.248145331764	1054.481737730328	2	528.249267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AYMDLPSMK_	REV__ENST00000573989.1_1_17:7834648-7835228:-|nuORF	53.351449002276354	0.2690372970092375	4				NaN	NaN	0	NaN	8015	3272	11283
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11290	30.254	NaN	10591	30	0	914.34	0.141	+			29536	PEGLVEFEAQ	10	83	559.7719658388671	1117.5293787445341	2	559.772705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PEGLVEFEAQ_	sp|F5HA93|TRX1_HCMVMTriplexcapsidprotein1OS=Humancytomegalovirus(strainMerlin)OX=295027GN=TRX1PE=3SV=1;sp|P16783|TRX1_HCMVATriplexcapsidprotein1OS=Humancytomegalovirus(strainAD169)OX=10360GN=TRX1PE=1SV=1	37.50817390946774	0.5721060100277453	4				NaN	NaN	0	NaN	8016	3272	11283
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11305	30.287	NaN	26044	30	0	10184	0.214				-1	 	0	78	363.8737082667858	1088.5992954005574	3	363.874267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8028	3275	11304
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11306	30.291	NaN	16413	30	0	2097.6	0.106	+			51344	YSSAQALSTF	10	90	537.7582360280143	1073.5019191228284	2	537.7589721679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YSSAQALSTF_	ENST00000216121.11_1_22:29951692-29951776:-|nuORF	56.72105179125745	0.3956618550748046	4				NaN	NaN	0	NaN	8029	3275	11304
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11307	30.293	NaN	11758	30	0	1374.3	0.106	+			209	AALNQQILK	9	84	499.8048038664755	997.595054799751	2	499.8031005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AALNQQILK_	ENSG00000131941|ENST00000254260|RHPN2;RHPN2|p.L194Pfs*53|1|0.13|ENSG00000131941|chr19:33011691-33011691|A/-|frameshift_variant	111.64827973302667	0.027316110422332632	4				NaN	NaN	0	NaN	8030	3275	11304
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11308	30.294	NaN	19816	30	0	2827	0.106	+			19610	KDGAKMVAAV	10	83	495.275464541463	988.536376149726	2	495.776611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KDGAKMVAAV_	ENSG00000131844|ENST00000340941|MCCC2;nc|ENSG00000131844|Q9HCC0-2|MCCC2	45.97224482568171	0.49411383603842696	4				NaN	NaN	0	NaN	8031	3275	11304
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11309	30.296	NaN	25040	30	0	2907.2	0.106				-1	 	0	86	563.2923648227645	1124.570176712329	2	563.2931518554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8032	3275	11304
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11310	30.298	NaN	4493.1	30	0	1041.2	0.035	+			21540	KNSSLLAKF	9	42	336.53385173438676	1006.5797258033604	3	336.5341491699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KNSSLLAKF_	tr|U7SW10|U7SW10_FUSNU23SrRNApseudouridine955/2504/2580synthaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01414PE=3SV=1	21.9598887501803	0.5980208138527809	4				NaN	NaN	0	NaN	8033	3275	11304
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11311	30.299	NaN	10621	30	0	796.2	0.14				-1	EAMRIMGIP	9	77	517.2609451100311	1032.5073372868621	2	517.7591552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_EAM(Oxidation (M))RIMGIP_	ENSG00000100345|ENST00000216181|MYH9;MYH9|p.I784*|1|0.07|ENSG00000100345|chr22:36304036-36304036|G/-|frameshift_variant;nc|ENSG00000100345|P35579-2|MYH9	42.47446043378293	0.39123495718708534	4				NaN	NaN	0	NaN	8034	3275	11304
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11324	30.328	NaN	106040	30	0	21374	0.214				-1	 	0	125	447.2452347474853	892.4759165617706	2	447.2454528808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8044	3278	11323
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11325	30.331	NaN	114920	30	0	17712	0.092	+			1030	AEKLGGSAVI	10	99	472.7737828143001	943.5330126954002	2	472.7739562988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEKLGGSAVI_	ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65622809-65623088:-|nuORF	102.0615471778698	0.07157459376830236	4				NaN	NaN	0	NaN	8045	3278	11323
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11326	30.333	NaN	44933	30	0	6667.4	0.106	+			33688	RPAPVEVTY	9	98	516.2790306130966	1030.543508292993	2	516.2796630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RPAPVEVTY_	ENSG00000112245|ENST00000626021|PTP4A1	79.71258880314673	0.09879134589249085	4				NaN	NaN	0	NaN	8046	3278	11323
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11327	30.335	NaN	22819	30	0	3671.5	0.106	+			14682	GTIGDMMQK	9	80	490.72986981443444	979.4451866956689	2	490.73040771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTIGDMMQK_	ENSG00000107874|ENST00000369937|CUEDC2;ENST00000477994.1_1_10:104183924-104192326:-|nuORF	145.15565482312357	0.00806134135205793	4				NaN	NaN	0	NaN	8047	3278	11323
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11328	30.337	NaN	35883	30	0	3229.9	0.106	+			10815	FANDANKVL	9	102	496.2631426226506	990.5117323121012	2	496.2637023925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FANDANKVL_	ENSG00000123104|ENST00000381340|ITPR2;ITPR2|p.D636Afs*14|1|0.07|ENSG00000123104|chr12:26658110-26658111|-/AATGG|frameshift_variant;ITPR2|p.F471Lfs*2|1|0.21|ENSG00000123104|chr12:26666048-26666048|A/-|frameshift_variant;ITPR2|p.K1802Sfs*13|2|0.65|ENSG00000123104|chr12:26487217-26487217|T/-|frameshift_variant;ITPR2|p.L1313Ffs*10|1|0.43|ENSG00000123104|chr12:26599208-26599209|-/A|frameshift_variant;ITPR2|p.L479Ffs*33|1|0.04|ENSG00000123104|chr12:26666026-26666027|-/GGAACAAA|frameshift_variant;ITPR2|p.N1390Mfs*17|1|0.07|ENSG00000123104|chr12:26596973-26596973|C/-|frameshift_variant;ITPR2|p.N858Kfs*2|1|0.38|ENSG00000123104|chr12:26655723-26655724|-/T|frameshift_variant;ITPR2|p.R1837Gfs*7|1|0.09|ENSG00000123104|chr12:26487113-26487113|T/-|frameshift_variant;ITPR2|p.R1837Kfs*4|1|0.24|ENSG00000123104|chr12:26487112-26487113|-/T|frameshift_variant	69.6276240434122	0.14239879520340665	4				NaN	NaN	0	NaN	8048	3278	11323
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11329	30.338	NaN	26676	30	0	3175	0.106	+			6003	AVMDGNVITAK	11	90	559.7971186686068	1117.5796844040135	2	559.7979125976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AVMDGNVITAK_	ENSG00000103316|ENST00000572914|CRYM;ENST00000571666.1_1_16:21273345-21289551:-|nuORF	91.09343320243018	0.09429844158206832	4				NaN	NaN	0	NaN	8049	3278	11323
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11330	30.34	NaN	12575	30	0	2396.1	0.034	+			48256	VTDGFSSLK	9	88	477.25023128925596	952.485909645312	2	477.2503967285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VTDGFSSLK_	ENSG00000110245|ENST00000227667|APOC3	88.17693792209575	0.07000514020414955	4				NaN	NaN	0	NaN	8050	3278	11323
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11348	30.377	NaN	64729	30	0	10431	0.214	+			14499	GTCLLIANK	9	95	495.275464541463	988.536376149726	2	495.2759704589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GTC(Carbamidomethyl (C))LLIANK_	CARM1|p.I452Sfs*12|1|0.18|ENSG00000142453|chr19:10920679-10920683|TTGTG/-|frameshift_variant;ENSG00000142453|ENST00000327064|CARM1;nc|ENSG00000142453|Q86X55-1|CARM1	171.38481719736927	0.0025305361306121837	4				NaN	NaN	0	NaN	8065	3281	11347
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11349	30.381	NaN	27537	30	0	2937	0.106	+			2638	AQINSVFNK	9	96	510.776842198933	1019.5391314646661	2	510.7774963378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AQINSVFNK_	ENSG00000117597|ENST00000491415|UTP25	45.02220120713402	0.3613509778819777	4				NaN	NaN	0	NaN	8066	3281	11347
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11350	30.383	NaN	18604	30	0	5590.1	0.106	+			39220	STAGLIIGK	9	80	430.2654873587364	858.5164217842728	2	430.265869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STAGLIIGK_	ENSG00000104967|ENST00000263257|NOVA2;ENSG00000139910|ENST00000539517|NOVA1;nc|ENSG00000139910|P51513-5|NOVA1	129.68262048586715	0.015338143639892752	4				NaN	NaN	0	NaN	8067	3281	11347
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11351	30.384	NaN	28746	30	0	11297	0.106	+			19009	IVVPKAAIVAR	11	86	379.5884170174959	1135.7434216526876	3	379.5887451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IVVPKAAIVAR_	ENSG00000265972|ENST00000582401|TXNIP;ENST00000488537.1_1_1:145440216-145440639:+|nuORF;nc|ENSG00000265972|Q9H3M7-2|TXNIP	81.52500206392136	0.13965942453989383	4				NaN	NaN	0	NaN	8068	3281	11347
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11352	30.386	NaN	8472	30	0	807.89	0.106	+			8784	EEINQQSQL	9	75	544.764323595247	1087.514094257294	2	544.765380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EEINQQSQL_	ENSG00000170759|ENST00000302418|KIF5B;KIF5B|p.M622Wfs*8|1|0.15|ENSG00000170759|chr10:32022898-32022898|T/-|frameshift_variant	145.46060221211434	0.007927189773590037	4				NaN	NaN	0	NaN	8069	3281	11347
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11353	30.388	NaN	12172	30	0	828.82	0.036	+			40905	SVFNKTLLK	9	90	525.3200010876635	1048.625449242127	2	525.32080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVFNKTLLK_	ENSG00000121316|ENST00000240617|PLBD1	42.86426827375447	0.38666266728046506	4				NaN	NaN	0	NaN	8070	3281	11347
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11354	30.389	NaN	6609.3	30	0	1337.1	0.139			+	27206	MEGSRINN	8	70	468.71350500886206	935.4124570845241	2	468.71441650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_M(Oxidation (M))EGSRINN_	REV__ENSG00000099949|ENST00000646124|LZTR1;REV__ENST00000479606.5_1_22:21333956-21351634:+|nuORF;REV__ENST00000492480.1_1_22:21346070-21348237:+|nuORF	44.116797842482775	0.6307669463330267	4				NaN	NaN	0	NaN	8071	3281	11347
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11371	30.425	NaN	107990	30	0	29453	0.214	+			39961	STMGYMMAK	9	104	510.22092023603517	1018.4272875388704	2	510.222412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STMGYMMAK_	ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;ENST00000518337.1_1_8:74128289-74128592:-|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P	195.8139193141414	5.102640151833004E-05	4				NaN	NaN	0	NaN	8085	3284	11370
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11372	30.429	NaN	36116	30	0	15049	0.106	+			32386	QVCDVVLNH	9	93	542.2654964906545	1082.516440048109	2	542.2669677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_QVC(Carbamidomethyl (C))DVVLNH_	ENSG00000050327|ENST00000056217|ARHGEF5;nc|ENSG00000050327|Q12774-2|ARHGEF5	162.25246889848123	0.0040893836092247005	4				NaN	NaN	0	NaN	8086	3284	11370
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11373	30.431	NaN	21860	30	0	2751.6	0.106	+			35127	SAHSHFISL	9	89	499.7546901705892	997.4948274079784	2	499.7565002441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAHSHFISL_	ARID2|p.L370Ffs*18|1|0.33|ENSG00000189079|chr12:45837401-45837402|-/T|frameshift_variant;ARID2|p.N1778Ifs*13|1|0.15|ENSG00000189079|chr12:45893686-45893686|A/-|frameshift_variant;ARID2|p.P851Hfs*4|1|0.36|ENSG00000189079|chr12:45850671-45850671|C/-|frameshift_variant;ARID2|p.Q686Hfs*19|1|0.04|ENSG00000189079|chr12:45850180-45850181|-/TGAAATGACTG|frameshift_variant;ENSG00000189079|ENST00000334344|ARID2;ENST00000479608.5_1_12:46230576-46239804:+|nuORF;nc|ENSG00000189079|Q68CP9-3|ARID2	120.62098272573253	0.020823834273767324	4				NaN	NaN	0	NaN	8087	3284	11370
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11374	30.432	NaN	19933	30	0	2318.2	0.106	+			45929	VAQSTRIIY	9	91	525.8003197573006	1049.586086581401	2	525.8013305664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VAQSTRIIY_	ENSG00000111669|ENST00000396705|TPI1;nc|ENSG00000111669|P60174-3|TPI1;nc|ENSG00000111669|P60174-4|TPI1	74.1650062923329	0.12277912660386392	4				NaN	NaN	0	NaN	8088	3284	11370
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11375	30.434	NaN	21968	30	0	2394	0.106	+			28094	NAFKEITTM	9	82	535.7632443218178	NaN	0	535.7635498046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_NAFKEITTM(Oxidation (M))_	ENSG00000137947|ENST00000370500|GTF2B;ENST00000486078.1_1_1:89325774-89329699:-|nuORF;ENST00000494819.5_1_1:89324456-89357188:-|nuORF	176.44474024533739	0.005964492135656625	4				NaN	NaN	0	NaN	8089	3284	11370
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11376	30.436	NaN	8346.1	30	0	823.16	0.034	+			50592	YDIRTNAV	8	76	476.2487576489065	NaN	0	476.24853515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YDIRTNAV_	ENSG00000117472|ENST00000372003|TSPAN1;ENST00000470318.1_1_1:46650565-46651202:+|nuORF	54.776311868738084	1.7418937515398478	4				NaN	NaN	0	NaN	8090	3284	11370
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11377	30.437	NaN	17453	30	0	1683.8	0.141	+			8581	EAYPDHTQF	9	83	554.2405496226853	1106.4665463121705	2	554.2416381835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EAYPDHTQF_	ENSG00000151500|ENST00000341541|THYN1;ENST00000533975.1_1_11:134119036-134122923:-|nuORF;nc|ENSG00000151500|Q9P016-2|THYN1;THYN1|p.N194Ifs*15|2|0.22|ENSG00000151500|chr11:134248859-134248859|T/-|frameshift_variant	69.6276240434122	0.14239879520340665	4				NaN	NaN	0	NaN	8091	3284	11370
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11394	30.473	NaN	647700	30	0	80327	0.126				-1	 	0	90	543.7938267451044	1085.5731005570087	2	543.794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8105	3287	11393
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11395	30.475	NaN	84056	30	0	42582	0.106				-1	 	0	94	350.8582596354191	1049.5529495064573	3	350.8587646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8106	3287	11393
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11396	30.477	NaN	44351	30	0	12600	0.106	+			44737	TTLTSQYIK	9	90	527.7919236548772	1053.5692943765544	2	527.79296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TTLTSQYIK_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	150.36159442982594	0.006784847064083231	4				NaN	NaN	0	NaN	8107	3287	11393
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11397	30.479	NaN	21568	30	0	2678.2	0.106	+			43462	TGNPTVIKM	9	87	480.7613117509996	959.5080705687992	2	480.7625427246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TGNPTVIKM_	ENSG00000140575|ENST00000268182|IQGAP1;ENSG00000145703|ENST00000274364|IQGAP2;ENST00000512383.1_1_5:75964652-75969784:+|nuORF;IQGAP1|p.S1529Afs*10|1|0.15|ENSG00000140575|chr15:90492665-90492665|A/-|frameshift_variant;IQGAP2|p.Q1499Rfs*15|1|0.05|ENSG00000145703|chr5:76701201-76701202|-/CCGAG|frameshift_variant;nc|ENSG00000145703|Q13576-2|IQGAP2;nc|ENSG00000145703|Q13576-3|IQGAP2	131.61620852596164	0.014413238321579053	4				NaN	NaN	0	NaN	8108	3287	11393
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11398	30.48	NaN	8296.7	30	0	1202.5	0.106			+	-1	RDKEPRHML	9	76	399.87660513166884	1196.6079859952065	3	399.8768615722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_RDKEPRHM(Oxidation (M))L_	REV__ENSG00000184838|ENST00000407149|PRR16;REV__nc|ENSG00000184838|Q569H4-2|PRR16;REV__nc|ENSG00000184838|Q569H4-3|PRR16	21.68575002086885	0.60058278597072	4				NaN	NaN	0	NaN	8109	3287	11393
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11399	30.482	NaN	19438	30	0	3838.4	0.106	+			30936	QELQELNRV	9	81	564.8033182619151	1127.5920835906302	2	564.8041381835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QELQELNRV_	ENST00000486498.1_1_2:171811278-171813015:+|nuORF	106.68306549817024	0.032382560583716295	4				NaN	NaN	0	NaN	8110	3287	11393
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11400	30.484	NaN	10361	30	0	1251.7	0.036				-1	 	0	87	343.6992850083592	2056.1520512505554	6	343.8662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8111	3287	11393
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11401	30.485	NaN	7217.6	30	0	1920.1	0.142			+	8065	DVKKFDKNL	9	77	369.544909341061	1105.612898623383	3	369.54498291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_DVKKFDKNL_	REV__ENST00000325117.8_1_X:101802327-101802774:-|nuORF	25.57405402267927	0.5642445186134241	4				NaN	NaN	0	NaN	8112	3287	11393
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11419	30.523	NaN	58922	30	0	24552	0.214				-1	 	0	76	451.288900370099	900.563247806998	2	451.2892150878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8127	3290	11418
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11420	30.526	NaN	40320	30	0	6736.4	0.106	+			7249	DALRCVNNY	9	93	562.7604860706925	1123.506419208185	2	562.7615356445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_DALRC(Carbamidomethyl (C))VNNY_	ENSG00000143155|ENST00000367833|TIPRL;nc|ENSG00000143155|O75663-2|TIPRL;TIPRL|p.F156Lfs*13|1|0.33|ENSG00000143155|chr1:168191448-168191448|T/-|frameshift_variant	90.60085204095205	0.06317133949006545	4				NaN	NaN	0	NaN	8128	3290	11418
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11421	30.528	NaN	19306	30	0	1575.7	0.106	+			12820	GENADSQIKL	10	88	537.7741413135597	1073.5337296939192	2	537.7749633789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GENADSQIKL_	ENSG00000189060|ENST00000340857|H1-0;nc|ENSG00000189060|P07305-2|H1-0	97.59673978297657	0.0875810153152853	4				NaN	NaN	0	NaN	8129	3290	11418
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11422	30.53	NaN	28502	30	0	6592.9	0.106			+	10182	ETALVSKQN	9	83	495.2667139871008	988.5188750410016	2	495.26739501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ETALVSKQN_	REV__nc|ENSG00000164621|Q9Y6J3|SMAD5-AS1	66.42927471994793	0.16001998865088202	4				NaN	NaN	0	NaN	8130	3290	11418
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11423	30.532	NaN	41259	30	0	14531	0.106	+			50705	YEERVQAVV	9	92	546.7870826945608	1091.5596124559215	2	546.7884521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YEERVQAVV_	ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1;SPTBN1|p.K503Rfs*24|1|0.06|ENSG00000115306|chr2:54626095-54626095|G/-|frameshift_variant	63.42647028704847	0.1850514934184437	4				NaN	NaN	0	NaN	8131	3290	11418
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11424	30.534	NaN	21629	30	0	13092	0.036				-1	 	0	64	356.86174702726566	1067.563411681997	3	356.8622131347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8132	3290	11418
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11425	30.534	NaN	12276	30	0	1193.3	0.141	+			22996	KVSDYILQH	9	84	551.7975790520567	1101.5806051709133	2	551.7982788085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KVSDYILQH_	ENSG00000148219|ENST00000313400|ASTN2;nc|ENSG00000148219|O75129-2|ASTN2;nc|ENSG00000148219|O75129-3|ASTN2;nc|ENSG00000148219|O75129-4|ASTN2;nc|ENSG00000148219|O75129-6|ASTN2	101.45984612302182	0.0377122763612125	4				NaN	NaN	0	NaN	8133	3290	11418
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11443	30.573	NaN	16977	30	0	2700.2	0.214	+			43202	TEVIHTGTL	9	83	485.7631504249478	969.5117479166956	2	485.7635498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEVIHTGTL_	ENSG00000182986|ENST00000682928|ZNF320;ENSG00000189190|ENST00000692063|ZNF600;ENSG00000203326|ENST00000474037|ZNF525;ENSG00000204604|ENST00000595646|ZNF468;ENSG00000213020|ENST00000652185|ZNF611;ENSG00000213793|ENST00000638862|ZNF888;ENSG00000213799|ENST00000458035|ZNF845;nc|ENSG00000189190|Q6ZNG1|ZNF600;nc|ENSG00000204604|Q5VIY5-2|ZNF468;nc|ENSG00000213020|Q8N823-2|ZNF611;nc|ENSG00000293246|Q8N8H1|ZNF321P;ZNF468|p.K232Nfs*4|1|0.3|ENSG00000204604|chr19:52841598-52841598|T/-|frameshift_variant;ZNF525|p.S149Yfs*51|1|0.05|ENSG00000203326|chr19:53381024-53381025|-/ATTGC|frameshift_variant;ZNF611|p.F463Lfs*36|1|0.09|ENSG00000213020|chr19:52705666-52705666|A/-|frameshift_variant;ZNF611|p.K221Nfs*6|1|0.35|ENSG00000213020|chr19:52706392-52706392|T/-|frameshift_variant	138.8255168832474	0.011031062795199845	4				NaN	NaN	0	NaN	8148	3293	11442
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11444	30.577	NaN	21469	30	0	5155.1	0.106			+	-1	QHMEIGKNF	9	84	560.2682699462458	1118.5219869592916	2	560.2695922851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_QHM(Oxidation (M))EIGKNF_	REV__ENSG00000149547|ENST00000278903|EI24;REV__nc|ENSG00000149547|O14681-3|EI24	60.97194046774394	0.20551255781574032	4				NaN	NaN	0	NaN	8149	3293	11442
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11445	30.579	NaN	19460	30	0	2805.7	0.106	+			27591	MPLAKDGLAM	10	84	531.769140368167	1061.5237278031339	2	531.7698364257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_MPLAKDGLAM(Oxidation (M))_	COL8A1|p.H599Mfs*24|2|0.46|ENSG00000144810|chr3:99795690-99795690|C/-|frameshift_variant;COL8A1|p.I509Lfs*24|1|0.12|ENSG00000144810|chr3:99795422-99795422|C/-|frameshift_variant;COL8A1|p.P576Lfs*20|1|0.09|ENSG00000144810|chr3:99795624-99795624|C/-|frameshift_variant;ENSG00000144810|ENST00000652472|COL8A1	60.11826168202944	0.36476464221954025	4				NaN	NaN	0	NaN	8150	3293	11442
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11446	30.58	NaN	12924	30	0	1912.4	0.106				-1	 	0	65	407.7364520124111	813.4583510916223	2	407.7368469238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8151	3293	11442
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11447	30.582	NaN	24571	30	0	4167.2	0.106			+	27850	MTGSGSKNTQ	10	85	505.73184420107947	1009.449135468959	2	505.7323303222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MTGSGSKNTQ_	REV__ENSG00000077549|ENST00000264202|CAPZB;REV__nc|ENSG00000077549|P47756-1|CAPZB	30.568863376406313	0.6301935916953115	4				NaN	NaN	0	NaN	8152	3293	11442
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11448	30.584	NaN	12353	30	0	1964	0.106	+			50076	WGCSWRSY	8	86	522.7217369041654	1043.4289208751306	2	522.7225341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_WGCSWRSY_	ENST00000280083.7_2_14:39736586-39746165:+|nuORF	57.81127852772723	0.5234495074909924	4				NaN	NaN	0	NaN	8153	3293	11442
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11449	30.586	NaN	12523	30	0	3630.5	0.034	+			14613	GTGFTPMVK	9	68	469.2442879900659	936.4740230469318	2	469.24285888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GTGFTPMVK_	ENSG00000065615|ENST00000369681|CYB5R4	69.6276240434122	0.14239879520340665	4				NaN	NaN	0	NaN	8154	3293	11442
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11460	30.611	NaN	30372	30	0	4500.9	0.204	+			5664	AVDQIAFQK	9	99	510.2791352427818	1018.5437175523637	2	510.27960205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVDQIAFQK_	ENSG00000144554|ENST00000675286|FANCD2;FANCD2|p.I1249Nfs*2|1|0.48|ENSG00000144554|chr3:10090346-10090347|-/A|frameshift_variant;FANCD2|p.N890Ifs*14|1|0.36|ENSG00000144554|chr3:10073312-10073312|A/-|frameshift_variant;nc|ENSG00000144554|Q9BXW9-1|FANCD2;nc|ENSG00000144554|Q9BXW9-3|FANCD2;nc|ENSG00000144554|Q9BXW9-4|FANCD2	102.0615471778698	0.03709830720253279	4				NaN	NaN	0	NaN	8162	3296	11459
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11461	30.614	NaN	40133	30	0	6151.6	0.106	+			23434	LADDSVRSL	9	94	488.2586081888147	974.5026634444295	2	488.2587585449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LADDSVRSL_	ENSG00000138078|ENST00000409411|PREPL;nc|ENSG00000138078|Q4J6C6-2|PREPL;nc|ENSG00000138078|Q4J6C6|PREPL	101.45984612302182	0.0377122763612125	4				NaN	NaN	0	NaN	8163	3296	11459
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11462	30.616	NaN	18557	30	0	2702	0.106	+			36220	SELTQPKL	8	90	458.2603216627001	NaN	0	458.2605895996094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SELTQPKL_	ENSG00000197601|ENST00000354817|FAR1;ENST00000524933.1_1_11:13716477-13732426:+|nuORF	122.1759843771914	1.7418937515398478	4				NaN	NaN	0	NaN	8164	3296	11459
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11463	30.618	NaN	9903.3	30	0	944.92	0.106	+			11700	FRSPAAPSP	9	81	465.2448309759159	928.4751090186318	2	465.2451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FRSPAAPSP_	ENSG00000109171|ENST00000264313|SLAIN2	39.252832667884924	0.4290233611298554	4				NaN	NaN	0	NaN	8165	3296	11459
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11464	30.62	NaN	11451	30	0	3213.5	0.106				-1	 	0	68	421.247481418968	840.480409904736	2	421.2479553222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8166	3296	11459
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11465	30.622	NaN	91244	30	0	38922	0.106				-1	 	0	97	366.88958638851096	1097.646929765733	3	366.89007568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8167	3296	11459
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11466	30.624	NaN	7733.7	30	0	474.45	0.036	+			42929	TEIIRQQGL	9	77	529.3029267773042	1056.5913006214082	2	529.3038940429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TEIIRQQGL_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	85.16082228582465	0.07850854922700509	4				NaN	NaN	0	NaN	8168	3296	11459
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11483	30.658	NaN	118690	30	0	34458	0.172	+			42029	SVYVYKVLK	9	83	549.8309222289432	1097.6472915246864	2	549.8316650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVYVYKVLK_	ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;nc|ENSG00000203814|Q5QNW6-2|H2BC18	177.3047273071476	0.0015666121956477066	4				NaN	NaN	0	NaN	8182	3299	11482
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11484	30.661	NaN	56779	30	0	4670.4	0.106	+			13007	GEVDVEQHTL	10	95	563.7718463049445	1125.5291396766888	2	563.7726440429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEVDVEQHTL_	ENSG00000134057|ENST00000256442|CCNB1;ENSG00000157456|ENST00000288207|CCNB2;nc|ENSG00000134057|P14635-2|CCNB1	223.32071464388096	1.2834390829910734E-11	4				NaN	NaN	0	NaN	8183	3299	11482
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11485	30.663	NaN	38605	30	0	5992.8	0.106	+			5427	ATYILEAGK	9	93	483.26847917592175	964.5224054186435	2	483.268310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATYILEAGK_	ENSG00000148444|ENST00000376836|COMMD3;ENST00000463409.6_1_10:22605382-22615407:+|nuORF;ENST00000470045.1_1_10:22605346-22607030:+|nuORF;ENST00000472673.5_1_10:22606461-22607284:+|nuORF;ENST00000479958.6_1_10:22605346-22607121:+|nuORF;ENST00000483684.1_1_10:22606823-22607748:+|nuORF;ENST00000496071.5_1_10:22605382-22607284:+|nuORF;ENST00000602574.5_1_10:22605346-22607236:+|nuORF	131.115847015877	0.014647977962315902	4				NaN	NaN	0	NaN	8184	3299	11482
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11486	30.665	NaN	30266	30	0	17566	0.106	+			6124	AVPTNIIAAK	10	71	499.30520170069207	996.5958504681842	2	499.30535888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVPTNIIAAK_	ENSG00000047249|ENST00000359530|ATP6V1H;ENST00000521335.1_1_8:54745492-54754250:-|nuORF;nc|ENSG00000047249|Q9UI12-2|ATP6V1H	63.69406221917213	0.3322431690470481	4				NaN	NaN	0	NaN	8185	3299	11482
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11487	30.667	NaN	31890	30	0	5380.8	0.106				-1	 	0	91	477.29203638440305	952.5695198356061	2	477.29217529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8186	3299	11482
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11488	30.669	NaN	16419	30	0	5923.5	0.106	+			37561	SLMHSFILK	9	85	364.5345080700707	1090.581694810412	3	364.53533935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_SLM(Oxidation (M))HSFILK_	ENSG00000125971|ENST00000357156|DYNLRB1;ENST00000480759.1_1_20:33117938-33128425:+|nuORF	80.45461616416974	0.09558281504443908	4				NaN	NaN	0	NaN	8187	3299	11482
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11489	30.67	NaN	27500	30	0	2631.3	0.034			+	17268	IAAELKEGL	9	83	472.2763797666982	NaN	0	472.2762451171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IAAELKEGL_	REV__ENSG00000153446|ENST00000472572|C16orf89;REV__ENST00000591875.1_1_16:5110243-5115909:-|nuORF;REV__nc|nan|Q6UX73|C16orf89	72.87924865735499	0.09578366712754152	4				NaN	NaN	0	NaN	8188	3299	11482
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11504	30.701	NaN	47342	30	0	4366.2	0.214				-1	 	0	95	531.8003209811329	1061.5860890290658	2	531.8011474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8200	3302	11503
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11505	30.705	NaN	47919	30	0	32761	0.106				-1	 	0	76	521.2816121201256	1040.548671307051	2	521.2826538085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8201	3302	11503
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11506	30.707	NaN	32129	30	0	5960.3	0.106	+			50818	YERVDGSVR	9	76	540.7757816967822	NaN	0	540.7757568359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YERVDGSVR_	ENSG00000131778|ENST00000369258|CHD1L;nc|ENSG00000131778|Q86WJ1-3|CHD1L;nc|ENSG00000131778|Q86WJ1-4|CHD1L;nc|ENSG00000131778|Q86WJ1-5|CHD1L	101.25262130126117	0.018912469721856617	4				NaN	NaN	0	NaN	8202	3302	11503
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11507	30.708	NaN	27591	30	0	3677.1	0.106			+	23775	LCLAWIAK	8	96	459.26768003985177	916.5208071465036	2	459.26806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LCLAWIAK_	REV__ENST00000394808.2_1_6:53072259-53072454:-|nuORF	104.94421144257274	0.24795105898230474	4				NaN	NaN	0	NaN	8203	3302	11503
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11508	30.71	NaN	11827	30	0	1901.1	0.106	+			51334	YSMPSTHAM	9	84	512.7139358351542	1023.4133187371084	2	512.7151489257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YSMPSTHAM_	ENSG00000126821|ENST00000247225|SGPP1;SGPP1|p.I357Lfs*3|2|0.18|ENSG00000126821|chr14:63686363-63686363|G/-|frameshift_variant	82.30502934623384	0.08758161712619916	4				NaN	NaN	0	NaN	8204	3302	11503
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11509	30.712	NaN	8408.6	30	0	2648	0.036	+			30940	QELQKVQEL	9	81	557.8080746748756	1113.601596416551	2	557.8092041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QELQKVQEL_	ENSG00000105357|ENST00000642316|MYH14;MYH14|p.L1950Sfs*14|1|0.34|ENSG00000105357|chr19:50309646-50309646|C/-|frameshift_variant;MYH14|p.M997*|1|0.19|ENSG00000105357|chr19:50271483-50271483|A/-|frameshift_variant;MYH14|p.R929Gfs*44|1|0.38|ENSG00000105357|chr19:50268237-50268237|G/-|frameshift_variant;nc|ENSG00000105357|Q7Z406-4|MYH14;nc|ENSG00000105357|Q7Z406-5|MYH14;nc|ENSG00000105357|Q7Z406-6|MYH14;nc|ENSG00000105357|Q7Z406|MYH14	101.25262130126117	0.03792372629710479	4				NaN	NaN	0	NaN	8205	3302	11503
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11510	30.713	NaN	6006.8	30	0	562.53	0.14				-1	 	0	65	405.2106319253775	808.4067109175551	2	405.2111511230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8206	3302	11503
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11528	30.752	NaN	78584	30	0	8669.2	0.2				-1	 	0	116	501.75811474106933	1001.5016765489387	2	501.7586669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8221	3305	11527
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11529	30.755	NaN	38757	30	0	7145.9	0.106	+			24191	LEQKLATL	8	89	458.2787157939306	914.5428786546612	2	458.2789611816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LEQKLATL_	ENSG00000163681|ENST00000671191|SLMAP;ENST00000467901.1_1_3:57743378-57875870:+|nuORF;nc|ENSG00000163681|Q14BN4-2|SLMAP;nc|ENSG00000163681|Q14BN4-3|SLMAP;nc|ENSG00000163681|Q14BN4-6|SLMAP;nc|ENSG00000163681|Q14BN4-7|SLMAP;nc|ENSG00000163681|Q14BN4|SLMAP	107.00750918261382	0.24681273948614665	4				NaN	NaN	0	NaN	8222	3305	11527
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11530	30.757	NaN	18217	30	0	1766.5	0.106				-1	 	0	78	507.8001240757223	1013.5856952182446	2	507.8006896972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8223	3305	11527
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11531	30.759	NaN	16363	30	0	3633.7	0.106	+			18931	IVNDFAYMK	9	72	558.7726625450172	1115.5307721568342	2	558.77392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_IVNDFAYM(Oxidation (M))K_	ENSG00000170348|ENST00000303575|TMED10;ENST00000534816.1_1_8:146220430-146220868:+|nuORF;ENST00000555036.1_1_14:75602424-75614456:-|nuORF;ENST00000555873.1_1_14:75601590-75605782:-|nuORF;ENST00000556969.5_1_14:75601590-75614465:-|nuORF	123.20810148215591	0.019257656778428764	4				NaN	NaN	0	NaN	8224	3305	11527
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11532	30.761	NaN	21272	30	0	8691.4	0.106	+			27116	MAPERVASL	9	74	487.2600497011594	972.5055464691188	2	487.26031494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MAPERVASL_	ENSG00000158169|ENST00000289081|FANCC;FANCC|p.V449Cfs*22|1|0.07|ENSG00000158169|chr9:95107254-95107254|C/-|frameshift_variant	66.96192283764107	0.15557981141143568	4				NaN	NaN	0	NaN	8225	3305	11527
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11533	30.763	NaN	21660	30	0	12650	0.106				-1	 	0	67	358.5615343925111	1072.6627737777333	3	358.56207275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8226	3305	11527
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11534	30.765	NaN	14342	30	0	5901	0.036				-1	 	0	88	537.3388518534822	1072.6631507737643	2	537.33984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8227	3305	11527
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11547	30.792	NaN	16746	30	0	8190.7	0.214				-1	 	0	63	354.2093480605307	1059.6062147817922	3	354.2098388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8237	3308	11546
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11548	30.795	NaN	16952	30	0	2968.7	0.106				-1	 	0	83	471.27381530316563	940.5330776731313	2	471.27410888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8238	3308	11546
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11549	30.797	NaN	15856	30	0	3303.4	0.106	+			627	ADVKVHIL	8	85	447.77359897364323	893.5326450140865	2	447.7738952636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ADVKVHIL_	ENSG00000115946|ENST00000263657|PNO1	71.29570347882199	0.39610197767395533	4				NaN	NaN	0	NaN	8239	3308	11546
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11550	30.799	NaN	22801	30	0	1813.7	0.106	+			25511	LPSPVTAQKY	10	99	552.3067562058555	1102.598959478511	2	552.3086547851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LPSPVTAQKY_	ENSG00000167658|ENST00000309311|EEF2;ENST00000598182.5_1_19:3980752-3982305:-|nuORF	123.20810148215591	0.02279876478776198	4				NaN	NaN	0	NaN	8240	3308	11546
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11551	30.801	NaN	31481	30	0	3052.3	0.106	+			26851	LVVRFYRN	8	97	533.8110934176075	1065.6076339020149	2	533.8121948242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LVVRFYRN_	ENSG00000183856|ENST00000361170|IQGAP3;IQGAP3|p.Q1205Sfs*31|1|0.4|ENSG00000183856|chr1:156534628-156534628|G/-|frameshift_variant	60.29395666154354	0.49887135096048313	4				NaN	NaN	0	NaN	8241	3308	11546
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11552	30.803	NaN	29351	30	0	5245	0.036	+			13988	GSCSDFQFK	9	81	538.2284393156398	1074.4423256980795	2	538.2298583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_GSC(Carbamidomethyl (C))SDFQFK_	ENSG00000124429|ENST00000262753|POF1B;nc|ENSG00000124429|Q8WVV4-1|POF1B	148.98678547993487	0.0071052929883181565	4				NaN	NaN	0	NaN	8242	3308	11546
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11553	30.803	NaN	11018	30	0	2069.3	0.141	+			37562	SLMHSFILK	9	77	546.2986533802233	1090.5827538272465	2	546.3001098632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_SLM(Oxidation (M))HSFILK_	ENSG00000125971|ENST00000357156|DYNLRB1;ENST00000480759.1_1_20:33117938-33128425:+|nuORF	107.00750918261382	0.032051501805654005	4				NaN	NaN	0	NaN	8243	3308	11546
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11567	30.834	NaN	44063	30	0	9590.7	0.214	+			35069	SAFGQAFSK	9	85	471.73722802503653	941.4599031168731	2	471.7374572753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAFGQAFSK_	ENSG00000129696|ENST00000431156|TTI2	142.36107225718385	0.009372392051035914	4				NaN	NaN	0	NaN	8254	3311	11566
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11568	30.838	NaN	28632	30	0	8299.5	0.106	+			1342	AETRAGLTL	9	93	466.2634296098841	930.5123062865682	2	466.2637634277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AETRAGLTL_	ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;nc|ENSG00000185164|Q5JPE7-3|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2;NOMO1|p.P1102Hfs*42|1|0.36|ENSG00000103512|chr16:14886838-14886838|C/-|frameshift_variant	115.49404669440601	0.023927554121326553	4				NaN	NaN	0	NaN	8255	3311	11566
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11569	30.839	NaN	18072	30	0	2114.2	0.106				-1	 	0	86	488.7779008551304	975.5412487770608	2	488.77825927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8256	3311	11566
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11570	30.841	NaN	15708	30	0	1797.3	0.106			+	32165	QSQVHRGKF	9	78	543.7938267451044	1085.5731005570087	2	543.79541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QSQVHRGKF_	REV__ENST00000339950.4_1_1:62902551-62902854:+|nuORF	64.20726635412375	0.17854274437659667	4				NaN	NaN	0	NaN	8257	3311	11566
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11571	30.843	NaN	38587	30	0	17185	0.106				-1	 	0	78	575.2971334133769	1148.5797138935536	2	575.298095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8258	3311	11566
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11572	30.845	NaN	29834	30	0	9226.1	0.037	+			19155	IYQKAFEHL	9	75	383.5414345813888	1147.6024743443663	3	383.5416259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IYQKAFEHL_	BBS4|p.E506Vfs*5|1|0.05|ENSG00000140463|chr15:72737544-72737545|AA/-|frameshift_variant;ENSG00000140463|ENST00000268057|BBS4;nc|ENSG00000140463|Q96RK4-2|BBS4;nc|ENSG00000140463|Q96RK4-3|BBS4	54.776311868738084	0.25715957988447635	4				NaN	NaN	0	NaN	8259	3311	11566
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11573	30.846	NaN	9170.9	30	0	1434.5	0.142	+			20571	KFTFLSMQPS	10	75	593.30327575637	1184.59199857954	2	593.3042602539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KFTFLSMQPS_	ENST00000480178.1_1_X:9716007-9727427:-|nuORF	49.536043120802724	0.461275219792494	4				NaN	NaN	0	NaN	8260	3311	11566
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11586	30.874	NaN	55990	30	0	15997	0.214				-1	 	0	84	413.2627256531612	824.5108983731225	2	413.26318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8270	3314	11585
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11587	30.878	NaN	28533	30	0	15413	0.106			+	28414	NETIAIDVI	9	86	494.27108625052136	986.5276195678427	2	494.27117919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NETIAIDVI_	REV__nc|ENSG00000151067|Q13936-15|CACNA1C	40.77816245573522	0.41113185337114944	4				NaN	NaN	0	NaN	8271	3314	11585
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11588	30.879	NaN	13889	30	0	1659.7	0.106			+	7638	DKLDQQSAL	9	75	509.2621186046759	1016.5096842761518	2	509.26434326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DKLDQQSAL_	REV__ENSG00000176681|ENST00000320254|LRRC37A;REV__ENSG00000176809|ENST00000584306|LRRC37A3;REV__ENSG00000238083|ENST00000576629|LRRC37A2;REV__LRRC37A3|p.F1359Cfs*8|1|0.04|ENSG00000176809|chr17:64860070-64860071|-/ACACAAACTAC|frameshift_variant;REV__LRRC37A3|p.K1304Nfs*11|2|0.36|ENSG00000176809|chr17:64860234-64860234|T/-|frameshift_variant	76.16968421966216	0.11411088698345859	4				NaN	NaN	0	NaN	8272	3314	11585
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11589	30.881	NaN	8115.3	30	0	1152.3	0.106	+			13968	GSAQGMDSMLK	11	81	562.7572244128825	NaN	0	562.7577514648438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GSAQGMDSMLK_	ENSG00000153046|ENST00000397588|CDYL;ENST00000472453.5_1_6:4776866-4954287:+|nuORF;nc|ENSG00000153046|Q9Y232-3|CDYL;nc|ENSG00000153046|Q9Y232-4|CDYL;nc|ENSG00000153046|Q9Y232|CDYL	128.51354385984777	0.00030779553820368407	4				NaN	NaN	0	NaN	8273	3314	11585
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11590	30.883	NaN	9260.2	30	0	815.14	0.106	+			10964	FEAPDQKTL	9	68	524.7698222343053	1047.5250915354104	2	524.7710571289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FEAPDQKTL_	ENSG00000117523|ENST00000647382|PRRC2C;nc|ENSG00000117523|Q9Y520-2|PRRC2C;nc|ENSG00000117523|Q9Y520-3|PRRC2C;nc|ENSG00000117523|Q9Y520-4|PRRC2C;nc|ENSG00000117523|Q9Y520-5|PRRC2C;nc|ENSG00000117523|Q9Y520-6|PRRC2C;nc|ENSG00000117523|Q9Y520|PRRC2C;PRRC2C|p.K1018Nfs*7|1|0.21|ENSG00000117523|chr1:171540521-171540521|A/-|frameshift_variant;PRRC2C|p.P2791Lfs*5|1|0.1|ENSG00000117523|chr1:171591761-171591761|C/-|frameshift_variant	89.02883481214508	0.06760336634167786	4				NaN	NaN	0	NaN	8274	3314	11585
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11591	30.885	NaN	13928	30	0	2308	0.036	+			30900	QEKTIEEQL	9	74	559.289821563365	1116.5650901935298	2	559.290283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QEKTIEEQL_	nc|ENSG00000157654|Q9Y2D5-3|PALM2AKAP2;nc|ENSG00000157654|Q9Y2D5-5|PALM2AKAP2;nc|ENSG00000157654|Q9Y2D5-6|PALM2AKAP2;nc|ENSG00000157654|Q9Y2D5-7|PALM2AKAP2;nc|ENSG00000157654|Q9Y2D5|PALM2AKAP2	107.00750918261382	0.032051501805654005	4				NaN	NaN	0	NaN	8275	3314	11585
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11592	30.886	NaN	6283.8	30	0	909.1	0.14			+	18602	ISRPNNTL	8	64	457.75626941378556	NaN	0	457.75665283203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ISRPNNTL_	REV__ENSG00000131951|ENST00000570145|LRRC9	51.33545320467046	1.7418937515398478	4				NaN	NaN	0	NaN	8276	3314	11585
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11605	30.914	NaN	38300	30	0	10151	0.214	+			6317	AVTDAIMSR	9	87	482.2499029438807	962.4852529545615	2	482.24969482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVTDAIMSR_	ENSG00000162298|ENST00000377190|SYVN1;ENST00000449943.5_1_11:64897669-64899838:-|nuORF;nc|ENSG00000162298|Q86TM6-2|SYVN1;nc|ENSG00000162298|Q86TM6-3|SYVN1;SYVN1|p.N368Qfs*129|1|0.33|ENSG00000162298|chr11:65130663-65130664|-/G|frameshift_variant;SYVN1|p.N368Tfs*117|1|0.4|ENSG00000162298|chr11:65130664-65130664|G/-|frameshift_variant	96.0336014099291	0.047854655524928534	4				NaN	NaN	0	NaN	8286	3317	11604
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11606	30.918	NaN	30420	30	0	5403	0.106				-1	 	0	90	502.2814794025063	1002.5484058718126	2	502.2820739746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8287	3317	11604
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11607	30.92	NaN	27763	30	0	2186.9	0.106	+			49531	VYANGIRNI	9	93	510.28408492748355	1018.5536169217671	2	510.28509521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYANGIRNI_	ENSG00000145495|ENST00000274140|MARCHF6;nc|ENSG00000145495|O60337-5|MARCHF6;nc|ENSG00000145495|O60337-6|MARCHF6	115.49404669440601	0.023927554121326553	4				NaN	NaN	0	NaN	8288	3317	11604
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11608	30.921	NaN	16111	30	0	2492.1	0.106	+			24268	LEVKTESL	8	82	459.76022336302145	917.5058937928429	2	459.7603759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LEVKTESL_	ENSG00000213676|ENST00000375203|ATF6B;ENST00000495579.5_1_6:32088425-32095984:-|nuORF;nc|ENSG00000213676|Q99941-2|ATF6B	69.6276240434122	0.4100012001731381	4				NaN	NaN	0	NaN	8289	3317	11604
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11609	30.923	NaN	13554	30	0	1698.3	0.106	+			41199	SVLDLSVHK	9	74	499.28708050876753	996.5596080843351	2	499.28717041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVLDLSVHK_	ENSG00000116731|ENST00000311066|PRDM2;nc|ENSG00000116731|Q13029-2|PRDM2;nc|ENSG00000116731|Q13029-3|PRDM2;nc|ENSG00000116731|Q13029-5|PRDM2;PRDM2|p.G1390Efs*14|1|0.21|ENSG00000116731|chr1:13781963-13781964|GG/-|frameshift_variant;PRDM2|p.N1426Ifs*3|1|0.17|ENSG00000116731|chr1:13782065-13782065|A/-|frameshift_variant;PRDM2|p.P1648Qfs*14|1|0.24|ENSG00000116731|chr1:13782731-13782731|G/-|frameshift_variant	131.61620852596164	0.014413238321579053	4				NaN	NaN	0	NaN	8290	3317	11604
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11610	30.925	NaN	15238	30	0	3754.8	0.106	+			24743	LHSGNEQF	8	81	466.21664672032693	930.4187405074539	2	466.2167053222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LHSGNEQF_	ADGRE3|p.F254Lfs*12|1|0.18|ENSG00000131355|chr19:14647301-14647301|A/-|frameshift_variant;ENSG00000131355|ENST00000253673|ADGRE3;ENST00000599900.5_1_19:14769312-14779653:-|nuORF;nc|ENSG00000131355|Q9BY15-3|ADGRE3	63.30626980617807	0.4690498839812213	4				NaN	NaN	0	NaN	8291	3317	11604
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11611	30.927	NaN	10737	30	0	1282.7	0.036	+			11910	FVAEQKVEY	9	82	556.7840150836491	1111.5534772340982	2	556.7845458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FVAEQKVEY_	ENSG00000114867|ENST00000346169|EIF4G1;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;ENST00000460829.5_1_3:184046782-184052693:+|nuORF;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1	106.68306549817024	0.032382560583716295	4				NaN	NaN	0	NaN	8292	3317	11604
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11627	30.959	NaN	85674	30	0	23082	0.214				-1	 	0	88	475.27066006034585	948.5267671874917	2	475.2712707519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8305	3320	11626
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11628	30.962	NaN	24174	30	0	8807.4	0.106	+			30826	QEENITRAL	9	81	537.2824116383879	1072.5502703435757	2	537.283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QEENITRAL_	ENSG00000099817|ENST00000615234|POLR2E;ENST00000586817.5_1_19:1089487-1094188:-|nuORF	112.10723106719422	0.02684780151337622	4				NaN	NaN	0	NaN	8306	3320	11626
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11629	30.964	NaN	17802	30	0	2248.9	0.106				-1	 	0	76	459.2374465838499	916.4603402344998	2	459.2377624511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8307	3320	11626
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11630	30.966	NaN	6324.8	30	0	3306.5	0.106	+			15661	GVMRIGLVAK	10	52	348.55086323859865	1042.630760315996	3	348.5513000488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GVMRIGLVAK_	ENSG00000165209|ENST00000348403|STRBP;ENST00000407982.6_1_9:125930502-125941310:-|nuORF;nc|ENSG00000165209|Q96SI9-2|STRBP	70.8162118820467	0.27065172005956	4				NaN	NaN	0	NaN	8308	3320	11626
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11631	30.968	NaN	11452	30	0	1943.6	0.106	+			1361	AEVELASRV	9	87	487.2677406490573	972.5209283649147	2	487.26898193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEVELASRV_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	85.86182877749512	0.07653218437724067	4				NaN	NaN	0	NaN	8309	3320	11626
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11632	30.97	NaN	5218.7	30	0	1767.6	0.037			+	-1	CPKNKYTCI	9	73	563.7718463049445	1125.5291396766888	2	564.2739868164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_C(Carbamidomethyl (C))PKNKYTCI_	REV__ADAMTS6|p.D907Gfs*10|1|0.25|ENSG00000049192|chr5:65188206-65188207|-/C|frameshift_variant;REV__ADAMTS6|p.E952Sfs*89|1|0.1|ENSG00000049192|chr5:65188073-65188073|T/-|frameshift_variant;REV__ADAMTS6|p.I1077Ffs*10|1|0.37|ENSG00000049192|chr5:65170633-65170633|G/-|frameshift_variant;REV__ENSG00000049192|ENST00000381055|ADAMTS6;REV__ENST00000381052.8_1_5:64593037-64747992:-|nuORF;REV__ENST00000470597.5_1_5:64558740-64769500:-|nuORF;REV__nc|ENSG00000049192|Q9UKP5-2|ADAMTS6;REV__nc|ENSG00000049192|Q9UKP5-3|ADAMTS6	30.317721548370564	0.5199124245378496	4				NaN	NaN	0	NaN	8310	3320	11626
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11633	30.97	NaN	4321.7	30	0	315.43	0.14			+	2585	AQFKIDSV	8	65	454.24712140950624	906.4796898858125	2	454.24737548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AQFKIDSV_	REV__ENSG00000241839|ENST00000323544|PLEKHO2;REV__ENST00000502574.1_1_15:65134152-65214443:+|nuORF;REV__nc|ENSG00000241839|Q8TD55-2|PLEKHO2	40.77816245573522	0.6514838689002179	4				NaN	NaN	0	NaN	8311	3320	11626
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11650	31.005	NaN	14471	30	0	2100.2	0.214	+			451	AAVGYIMEK	9	84	491.257161667767	NaN	0	491.2572021484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAVGYIMEK_	ENSG00000111361|ENST00000424014|EIF2B1	104.0567914643314	0.015064339666778382	4				NaN	NaN	0	NaN	8325	3323	11649
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11651	31.009	NaN	26596	30	0	1565	0.106	+			36831	SIFDGRVVAK	10	97	546.3130691081209	1090.6115852830417	2	546.3140258789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SIFDGRVVAK_	ENSG00000143183|ENST00000367881|TMCO1;nc|ENSG00000143183|Q9UM00-2|TMCO1;nc|ENSG00000143183|Q9UM00|TMCO1	68.84614121027924	0.2867470276772903	4				NaN	NaN	0	NaN	8326	3323	11649
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11652	31.011	NaN	36486	30	0	10046	0.106				-1	 	0	91	508.8155766554676	1015.6166003777353	2	508.8161315917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8327	3323	11649
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11653	31.013	NaN	29964	30	0	2589.1	0.106				-1	 	0	91	543.7938267451044	1085.5731005570087	2	543.7828979492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8328	3323	11649
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11654	31.014	NaN	6770.7	30	0	688.1	0.106	+			958	AEKAFVSV	8	68	425.7365425690174	849.4585322048348	2	425.73699951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEKAFVSV_	ABCC3|p.L968Afs*31|1|0.33|ENSG00000108846|chr17:50675920-50675921|-/G|frameshift_variant;ENSG00000108846|ENST00000285238|ABCC3;ENST00000502426.5_1_17:48736553-48755440:+|nuORF;nc|ENSG00000108846|O15438-2|ABCC3;nc|ENSG00000108846|O15438-4|ABCC3	125.81401957644128	0.2262431007506538	4				NaN	NaN	0	NaN	8329	3323	11649
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11655	31.016	NaN	20605	30	0	2613.8	0.106				-1	IPNPFPELCC	10	72	595.2738455551926	1188.533138177185	2	595.27490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_IPNPFPELC(Carbamidomethyl (C))C_	ENSG00000115290|ENST00000263915|GRB14;ENST00000488342.5_1_2:165365032-165477819:-|nuORF;GRB14|p.E402Rfs*18|1|0.29|ENSG00000115290|chr2:164497391-164497392|-/T|frameshift_variant	35.61828744233558	0.588957954432594	4				NaN	NaN	0	NaN	8330	3323	11649
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11656	31.018	NaN	7272.8	30	0	1603.7	0.033	+			5581	AVATALGLK	9	74	422.26811027475554	842.5216676163111	2	422.26837158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AVATALGLK_	ENSG00000107819|ENST00000393459|SFXN3	96.19043198914106	0.047412499214244314	4				NaN	NaN	0	NaN	8331	3323	11649
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11674	31.054	NaN	43117	30	0	2746.3	0.215	+			24369	LFQNITLED	9	100	546.781127090131	1091.547701247062	2	546.7820434570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LFQNITLED_	ENSG00000105352|ENST00000221954|CEACAM4;ENST00000472081.1_1_19:42131969-42133331:-|nuORF	90.36981228632155	0.0638227155548745	4				NaN	NaN	0	NaN	8346	3326	11673
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11675	31.058	NaN	26551	30	0	9466.9	0.106	+			11275	FIVKMWRL	8	68	364.88477752000324	1091.6325031602098	3	364.8851623535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FIVKMWRL_	ENSG00000119707|ENST00000261973|RBM25	30.503639358989545	0.7238069182250283	4				NaN	NaN	0	NaN	8347	3326	11673
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11676	31.06	NaN	14755	30	0	2564.4	0.106				-1	 	0	78	554.2456616603907	1106.4767703875814	2	554.2463989257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8348	3326	11673
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11677	31.062	NaN	12677	30	0	7687.1	0.106				-1	 	0	73	521.2816121201256	1040.548671307051	2	521.2825317382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8349	3326	11673
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11678	31.064	NaN	21708	30	0	11025	0.106	+			32347	QTYEEALYK	9	69	572.7785218764553	1143.5424908197106	2	572.7796630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QTYEEALYK_	ENSG00000106541|ENST00000419304|AGR2	136.26810882979174	0.012230845423532208	4				NaN	NaN	0	NaN	8350	3326	11673
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11679	31.065	NaN	17200	30	0	1458.1	0.035	+			7567	DIFTIREE	8	83	511.76278611006353	1021.5110192869271	2	511.7656555175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DIFTIREE_	ENSG00000084774|ENST00000264705|CAD	71.29570347882199	0.39610197767395533	4				NaN	NaN	0	NaN	8351	3326	11673
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11680	31.066	NaN	21164	30	0	2088.8	0.141	+			7111	DAAAEERPPD	10	87	535.7406619633932	1069.4667709935864	2	535.7412719726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DAAAEERPPD_	ENST00000555759.1_1_14:95912279-95916550:-|nuORF	67.49366992349736	0.29779660154124327	4				NaN	NaN	0	NaN	8352	3326	11673
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11697	31.102	NaN	17635	30	0	6262.7	0.214				-1	 	0	70	455.29154132076513	908.5685297083303	2	455.2920227050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8366	3329	11696
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11698	31.106	NaN	42350	30	0	3699.6	0.106	+			50434	YACEVTHQGL	10	94	560.7578425787426	1119.5011322242851	2	560.7586669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YACEVTHQGL_	nc|ENSG00000211592|P01834|IGKC	146.78539889680295	0.009066311176022962	4				NaN	NaN	0	NaN	8367	3329	11696
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11699	31.108	NaN	21562	30	0	2826.2	0.106				-1	AEKSKVVFC	9	87	534.2803585064405	1066.546164079681	2	535.2802124023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_AEKSKVVFC(Carbamidomethyl (C))_	ENST00000375963.7_1_9:88953844-88955005:-|nuORF	44.116797842482775	0.37197099687881774	4				NaN	NaN	0	NaN	8368	3329	11696
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11700	31.11	NaN	11518	30	0	2034.9	0.106	+			35021	SACSFTFSK	9	77	517.733182702179	1033.4518124711578	2	517.7344360351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_SAC(Carbamidomethyl (C))SFTFSK_	ENSG00000131375|ENST00000253693|CAPN7;ENST00000443567.5_1_3:15282348-15292515:+|nuORF	80.45461616416974	0.09558281504443908	4				NaN	NaN	0	NaN	8369	3329	11696
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11701	31.111	NaN	14920	30	0	1241	0.106	+			27408	MKSVVCKM	8	82	463.23565072409167	924.4567485149834	2	463.73956298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MKSVVCKM_	ENSG00000102452|ENST00000251127|NALCN	55.50420428727701	0.5462892107279674	4				NaN	NaN	0	NaN	8370	3329	11696
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11702	31.113	NaN	11589	30	0	1309.6	0.037			+	9576	ELIIISQTKQ	10	81	586.8482041940634	1171.6818554549268	2	586.8489990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ELIIISQTKQ_	REV__ENSG00000107290|ENST00000224140|SETX;REV__nc|ENSG00000107290|Q7Z333-3|SETX;REV__nc|ENSG00000107290|Q7Z333-4|SETX;REV__SETX|p.T2478Sfs*35|1|0.35|ENSG00000107290|chr9:132264836-132264840|TATGG/-|frameshift_variant	35.15202426646627	0.5927656479315102	4				NaN	NaN	0	NaN	8371	3329	11696
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11703	31.114	NaN	8367.8	30	0	493.88	0.141	+			17461	ICIVCSAIY	9	76	492.7469576350415	NaN	0	492.7482604980469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ICIVCSAIY_	ENST00000536683.5_1_11:94966793-94966961:+|nuORF	50.0245360154114	0.20652386741182333	4				NaN	NaN	0	NaN	8372	3329	11696
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11720	31.151	NaN	81165	30	0	7952.4	0.214				-1	 	0	106	474.2646374610739	946.5147219889478	2	474.264892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8386	3332	11719
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11721	31.154	NaN	20158	30	0	3308.8	0.106			+	15238	GTSYQSAVL	9	76	463.23565072409167	924.4567485149834	2	463.23480224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTSYQSAVL_	REV__EHD2|p.G65S|1|0.27|ENSG00000024422|chr19:47716805-47716805|G/A|missense_variant	82.24051045832904	0.08786059719216216	4				NaN	NaN	0	NaN	8387	3332	11719
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11722	31.156	NaN	27757	30	0	3364.4	0.106	+			23583	LALTMVKVF	9	100	511.30947634931437	1020.6043997654288	2	511.31011962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LALTMVKVF_	ENSG00000173281|ENST00000310455|PPP1R3B	45.9519527083369	0.35044536499095585	4				NaN	NaN	0	NaN	8388	3332	11719
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11723	31.158	NaN	9946.2	30	0	1579.7	0.106	+			21334	KLTYIYIQK	9	82	585.3498104448179	1168.6850679564357	2	585.3502807617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KLTYIYIQK_	ENST00000383746.7_2_3:44396236-44396287:+|nuORF	168.25843898104137	0.0030641937004078144	4				NaN	NaN	0	NaN	8389	3332	11719
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11724	31.16	NaN	8203.1	30	0	1246.3	0.106				-1	 	0	77	477.29203638440305	952.5695198356061	2	477.29217529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8390	3332	11719
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11725	31.162	NaN	7894.9	30	0	753.09	0.038	+			16352	HELQEKLSPL	10	82	597.3296211988995	1192.644689464599	2	597.3303833007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HELQEKLSPL_	ENSG00000118137|ENST00000236850|APOA1	204.78781133344324	1.6955929219748032E-06	4				NaN	NaN	0	NaN	8391	3332	11719
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11726	31.162	NaN	3663.3	30	0	759.54	0.143				-1	 	0	45	336.53376358563514	1006.5794613571054	3	336.5343322753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8392	3332	11719
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11741	31.195	NaN	123340	30	0	13987	0.214	+			3764	ATAELIMSR	9	105	496.2653990017689	990.5162450703378	2	496.2654724121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATAELIMSR_	ENSG00000105677|ENST00000222284|TMEM147;ENST00000477168.6_1_19:36036641-36037810:+|nuORF;ENST00000595467.1_1_19:36037522-36037810:+|nuORF;nc|ENSG00000105677|Q9BVK8-2|TMEM147	209.1949250693894	5.5435209957013866E-08	4				NaN	NaN	0	NaN	8404	3335	11740
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11742	31.199	NaN	78157	30	0	15167	0.106	+			51394	YTNGKCVIL	9	98	534.2803585064405	1066.546164079681	2	534.28173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_YTNGKC(Carbamidomethyl (C))VIL_	ENSG00000071127|ENST00000499869|WDR1;ENST00000509600.1_1_4:10117520-10118290:-|nuORF;ENST00000514319.5_1_4:10110004-10118075:-|nuORF;nc|ENSG00000071127|O75083-3|WDR1	82.7504851949679	0.08565546331141553	4				NaN	NaN	0	NaN	8405	3335	11740
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11743	31.201	NaN	11598	30	0	1294.1	0.106			+	24075	LEKEIREQ	8	82	522.7887124366657	1043.5628719401313	2	522.7892456054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LEKEIREQ_	REV__ENSG00000157470|ENST00000288228|FAM81A	79.71258880314673	0.32596852995588826	4				NaN	NaN	0	NaN	8406	3335	11740
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11744	31.202	NaN	13653	30	0	982.98	0.106			+	30641	QASWPSSSL	9	76	481.7321440904184	961.4497352476368	2	481.7323303222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QASWPSSSL_	REV__ENSG00000185133|ENST00000331075|INPP5J;REV__nc|ENSG00000185133|Q15735-2|INPP5J	79.71258880314673	0.09879134589249085	4				NaN	NaN	0	NaN	8407	3335	11740
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11745	31.204	NaN	6127.5	30	0	1373.2	0.106	+			45830	VAKESIPL	8	54	428.7600411999663	855.5055294667326	2	428.760498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VAKESIPL_	ENSG00000274070|ENST00000616305|CASTOR2;ENST00000328453.9_1_7:99831276-99869601:-|nuORF;ENST00000544802.5_1_7:72569162-72589455:+|nuORF	110.33723246496265	0.24497573416425186	4				NaN	NaN	0	NaN	8408	3335	11740
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11746	31.206	NaN	15627	30	0	3528.2	0.035	+			29654	PGLALAEPSR	10	83	505.7845911944476	1009.5546294556952	2	505.785400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PGLALAEPSR_	ENST00000563630.5_2_16:2051172-2051695:-|nuORF	54.776311868738084	0.41334902933431344	4				NaN	NaN	0	NaN	8409	3335	11740
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11747	31.207	NaN	6226.4	30	0	884.3	0.142	+			26702	LVIDNGSGMCK	11	73	568.7743115142617	1135.5340700953234	2	568.7760009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LVIDNGSGMCK_	ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196604|ENST00000409914|POTEF;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000204434|Q9BYX7|POTEKP;POTEE|p.N792Kfs*34|1|0.2|ENSG00000188219|chr2:131263828-131263829|-/A|frameshift_variant;POTEF|p.R728Gfs*16|3|0.06|ENSG00000196604|chr2:130075290-130075290|G/-|frameshift_variant	63.53385203322761	0.2919106290768168	4				NaN	NaN	0	NaN	8410	3335	11740
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11761	31.238	NaN	30003	30	0	14400	0.214	+			10606	EYLTKVDKL	9	91	554.8157173396145	1107.6168817460289	2	554.816650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EYLTKVDKL_	ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000141367|Q00610-2|CLTC	155.5846463517096	0.005567437401040498	4				NaN	NaN	0	NaN	8421	3338	11760
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11762	31.241	NaN	21394	30	0	2448.9	0.106	+			10240	ETKDKTQKL	9	91	545.8109945936008	NaN	0	545.8113403320312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ETKDKTQKL_	ENSG00000166535|ENST00000299698|A2ML1	120.8684288430529	0.001996491448359331	4				NaN	NaN	0	NaN	8422	3338	11760
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11763	31.243	NaN	11803	30	0	1680.9	0.106	+			26796	LVSESSDVLPK	11	81	587.3210832340638	1172.6276135349276	2	587.3223266601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LVSESSDVLPK_	CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000425226.1_1_2:203705056-203705395:-|nuORF;ENST00000489121.1_1_3:137820322-137820643:-|nuORF;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	122.93914200107957	0.014531093899805671	4				NaN	NaN	0	NaN	8423	3338	11760
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11764	31.245	NaN	10560	30	0	1242.2	0.106			+	26080	LSMAKAGLGL	10	84	488.7767876692784	NaN	0	488.7770690917969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_LSM(Oxidation (M))AKAGLGL_	REV__ENSG00000068137|ENST00000591022|PLEKHH3;REV__ENST00000591476.5_1_17:40820147-40821663:-|nuORF;REV__ENST00000591490.5_1_17:40821363-40821663:-|nuORF	49.44154591367651	0.30913310806145605	4				NaN	NaN	0	NaN	8424	3338	11760
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11765	31.247	NaN	7146.9	30	0	2500.9	0.106	+			35987	SEHPDQAQAIL	11	72	604.7986144538778	1207.5826759745555	2	604.7994995117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SEHPDQAQAIL_	ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1	46.45678178249821	0.46959456050452836	4				NaN	NaN	0	NaN	8425	3338	11760
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11766	31.249	NaN	7731.9	30	0	854.64	0.035				-1	ASATCSSATAA	11	76	499.21758741021864	996.4206218872373	2	499.2184143066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_ASATC(Carbamidomethyl (C))SSATAA_	ENSG00000068308|ENST00000376488|OTUD5;nc|ENSG00000068308|Q96G74-2|OTUD5;nc|ENSG00000068308|Q96G74-3|OTUD5;nc|ENSG00000068308|Q96G74-4|OTUD5;nc|ENSG00000068308|Q96G74|OTUD5	40.05817265558897	0.5571470695993369	4				NaN	NaN	0	NaN	8426	3338	11760
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11767	31.249	NaN	8569.4	30	0	747.52	0.14			+	10075	ESIKERDY	8	79	520.2556344134798	1038.4967158937595	2	520.2570190429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ESIKERDY_	REV__ENSG00000197808|ENST00000588268|ZNF461;REV__nc|ENSG00000197808|Q8TAF7-2|ZNF461;REV__ZNF461|p.S208Tfs*62|1|0.18|ENSG00000197808|chr19:36639722-36639723|-/AAATGCAATGAGTG|frameshift_variant	53.351449002276354	0.5676011784961348	4				NaN	NaN	0	NaN	8427	3338	11760
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11778	31.275	NaN	13108	30	0	1973	0.214	+			7214	DAISKTYSY	9	82	524.2525200512429	1046.4904871692856	2	524.2536010742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DAISKTYSY_	ENSG00000140988|ENST00000343262|RPS2;ENST00000397318.4_1_X:40794237-40794825:-|nuORF;ENST00000438210.1_1_1:40428398-40429073:+|nuORF;ENST00000441047.1_1_17:51834352-51834658:-|nuORF;ENST00000443417.1_1_9:102879039-102879699:-|nuORF;ENST00000475555.1_1_4:144270430-144270667:-|nuORF;ENST00000494359.1_1_11:17250107-17250695:+|nuORF;ENST00000529806.5_1_16:2012098-2012518:-|nuORF;ENST00000532746.5_2_16:2012101-2013785:-|nuORF;ENST00000533872.5_1_16:2012101-2013018:-|nuORF;RPL18-RPS2|1|fusion	93.5975768576971	0.05472259948179787	4				NaN	NaN	0	NaN	8435	3341	11777
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11779	31.278	NaN	8147.6	30	0	1876.1	0.106	+			11062	FERTEVLAA	9	76	518.276028651142	1034.537504369084	2	518.277099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FERTEVLAA_	ENSG00000124145|ENST00000372733|SDC4	36.446750945000026	0.4619375763483977	4				NaN	NaN	0	NaN	8436	3341	11777
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11780	31.28	NaN	7909.5	30	0	982.1	0.106				-1	 	0	65	442.252885369397	882.491217805594	2	442.2532043457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8437	3341	11777
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11781	31.282	NaN	7742.7	30	0	1230.9	0.106	+			8519	EATLWTFTS	9	74	528.2549742882	1054.4953956431998	2	528.2562255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EATLWTFTS_	ENST00000520134.1_1_5:179228789-179233279:-|nuORF;ENST00000521305.5_1_5:179228789-179229839:-|nuORF	45.9519527083369	0.35044536499095585	4				NaN	NaN	0	NaN	8438	3341	11777
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11782	31.284	NaN	13639	30	0	1511.7	0.106			+	23768	LCHGPPGAGGL	11	82	489.7463336052925	NaN	0	489.74700927734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LCHGPPGAGGL_	REV__ENSG00000184507|ENST00000537011|NUTM1;REV__nc|ENSG00000184507|Q86Y26-3|NUTM1;REV__nc|ENSG00000184507|Q86Y26|NUTM1;REV__NUTM1|p.M697Wfs*28|1|0.12|ENSG00000184507|chr15:34356176-34356176|C/-|frameshift_variant;REV__NUTM1|p.Q931Kfs*53|1|0.37|ENSG00000184507|chr15:34356879-34356879|C/-|frameshift_variant	40.5726180659479	0.38302970871559716	4				NaN	NaN	0	NaN	8439	3341	11777
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11783	31.286	NaN	7133.2	30	0	2040.1	0.036	+			18536	ISLNFLHLT	9	58	353.2056674514136	1056.5951729544408	3	353.2060852050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ISLNFLHLT_	ENST00000361523.8_1_17:40962415-40962475:-|nuORF	27.882242232435846	0.5426732730940306	4				NaN	NaN	0	NaN	8440	3341	11777
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11784	31.286	NaN	5978	30	0	1075.2	0.138			+	42336	TAGPALRPI	9	53	448.27124430099866	894.5279356687973	2	448.2714538574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TAGPALRPI_	REV__ENST00000257897.7_2_12:58119581-58120334:-|nuORF	40.77816245573522	0.41113185337114944	4				NaN	NaN	0	NaN	8441	3341	11777
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11794	31.309	NaN	22290	30	0	6467	0.214	+			37383	SLFSSKLST	9	82	485.2656493449541	968.5167457567082	2	485.2657165527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLFSSKLST_	ENSG00000058804|ENST00000371429|NDC1;nc|ENSG00000058804|Q9BTX1-2|NDC1;nc|ENSG00000058804|Q9BTX1-4|NDC1;nc|ENSG00000058804|Q9BTX1-5|NDC1;nc|ENSG00000058804|Q9BTX1-6|NDC1	51.33545320467046	0.2872990594074956	4				NaN	NaN	0	NaN	8448	3344	11793
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11795	31.313	NaN	17053	30	0	1447.2	0.106				-1	 	0	88	474.2646374610739	946.5147219889478	2	474.26470947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8449	3344	11793
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11796	31.315	NaN	9079.2	30	0	830.04	0.106	+			4047	ATDELSSALAK	11	84	553.2898673034832	1104.5651816737663	2	553.290283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATDELSSALAK_	ENSG00000073614|ENST00000399788|KDM5A;nc|ENSG00000073614|P29375-2|KDM5A	147.73206827945663	7.428873318560114E-05	4				NaN	NaN	0	NaN	8450	3344	11793
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11797	31.317	NaN	8081.4	30	0	1072.3	0.106			+	10581	EYIRTCVV	8	80	491.7536386300155	981.492724326831	2	491.75506591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EYIRTCVV_	REV__ENSG00000147588|ENST00000256103|PMP2	42.396135135203025	0.6414440140393314	4				NaN	NaN	0	NaN	8451	3344	11793
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11798	31.319	NaN	9267.5	30	0	1187	0.106			+	26237	LSSPVLLY	8	78	446.2610900580939	890.5076271829878	2	446.26123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSSPVLLY_	REV__ENSG00000188906|ENST00000298910|LRRK2;REV__ENST00000479187.5_1_12:40692272-40758932:+|nuORF;REV__LRRK2|p.N2261Kfs*9|1|0.28|ENSG00000188906|chr12:40356119-40356120|-/A|frameshift_variant	86.93460362436232	0.2867499496721195	4				NaN	NaN	0	NaN	8452	3344	11793
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11799	31.32	NaN	10423	30	0	1001.8	0.106			+	32166	QSQVHRGKF	9	85	543.7938267451044	1085.5731005570087	2	543.7952880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QSQVHRGKF_	REV__ENST00000339950.4_1_1:62902551-62902854:+|nuORF	54.776311868738084	0.25715957988447635	4				NaN	NaN	0	NaN	8453	3344	11793
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11800	31.322	NaN	8709	30	0	1521.7	0.035			+	20302	KEPVISNIK	9	63	514.3107245206146	1026.606896108029	2	514.3108520507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KEPVISNIK_	REV__tr|U7STZ0|U7STZ0_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01250PE=4SV=1	40.05817265558897	0.419577045485086	4				NaN	NaN	0	NaN	8454	3344	11793
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11817	31.357	NaN	19088	30	0	4766.4	0.214				-1	 	0	91	508.8155766554676	1015.6166003777353	2	508.8160095214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8468	3347	11816
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11818	31.361	NaN	31120	30	0	3168.8	0.106	+			28308	NEFEATQKL	9	86	540.2703297053175	1078.526106477435	2	540.2723999023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NEFEATQKL_	ENSG00000165030|ENST00000297689|NFIL3	178.54760496737404	0.0014418427517892064	4				NaN	NaN	0	NaN	8469	3347	11816
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11819	31.363	NaN	15866	30	0	1919	0.106	+			8540	EAVKLCDSY	9	87	542.7515214161706	1083.488489899141	2	542.7529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_EAVKLC(Carbamidomethyl (C))DSY_	ENSG00000125944|ENST00000302271|HNRNPR;HNRNPR|p.L367Qfs*19|1|0.05|ENSG00000125944|chr1:23313620-23313621|-/TTTAATCTCT|frameshift_variant;HNRNPR|p.W594Gfs*15|1|0.23|ENSG00000125944|chr1:23310575-23310576|CA/-|frameshift_variant;nc|ENSG00000125944|O43390-2|HNRNPR;nc|ENSG00000125944|O43390-3|HNRNPR;nc|ENSG00000125944|O43390-4|HNRNPR	190.51785368661015	0.00024017880420896124	4				NaN	NaN	0	NaN	8470	3347	11816
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11820	31.365	NaN	19083	30	0	2267.4	0.106	+			4654	ATLQEALAH	9	96	477.2556196286523	952.4966863241046	2	477.255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATLQEALAH_	ENSG00000137497|ENST00000393695|NUMA1;nc|ENSG00000137497|Q14980-2|NUMA1;nc|ENSG00000137497|Q14980-3|NUMA1;nc|ENSG00000137497|Q14980-4|NUMA1;NUMA1|p.K1766Rfs*2|1|0.39|ENSG00000137497|chr11:72007357-72007357|G/-|frameshift_variant;NUMA1|p.L1786Pfs*18|1|0.23|ENSG00000137497|chr11:72007295-72007296|-/G|frameshift_variant	167.22876102047192	0.0032399547248545047	4				NaN	NaN	0	NaN	8471	3347	11816
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11821	31.367	NaN	100320	30	0	23963	0.106				-1	 	0	100	374.22023874404124	1119.6388868323238	3	374.2206115722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8472	3347	11816
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11822	31.368	NaN	16597	30	0	2761.3	0.038				-1	REKMTQIMF	9	89	600.2984178259492	1198.5822827186983	2	600.2991333007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_REKMTQIM(Oxidation (M))F_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196604|ENST00000409914|POTEF;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000415776.1_1_Y:19869357-19869702:-|nuORF;ENST00000446382.2_1_9:6834760-6835018:+|nuORF;ENST00000457622.1_1_6:46172676-46173294:+|nuORF;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;nc|ENSG00000204434|Q9BYX7|POTEKP	49.536043120802724	0.308405419312776	4				NaN	NaN	0	NaN	8473	3347	11816
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11823	31.369	NaN	22515	30	0	6407.4	0.146	+			37655	SLQSIIHKFL	10	87	395.904175554756	1184.690697264468	3	395.9043884277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SLQSIIHKFL_	ENSG00000095787|ENST00000354911|WAC;nc|ENSG00000095787|Q9BTA9-2|WAC;nc|ENSG00000095787|Q9BTA9-3|WAC;nc|ENSG00000095787|Q9BTA9-5|WAC	38.753607047826485	0.5606299674732264	4				NaN	NaN	0	NaN	8474	3347	11816
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11840	31.407	NaN	41823	30	0	12267	0.214	+			13774	GQGTFTKIFK	10	80	376.2131622772921	1125.6176574320764	3	376.2132873535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GQGTFTKIFK_	ENSG00000096968|ENST00000381652|JAK2	41.080066990542036	0.5391928043837881	4				NaN	NaN	0	NaN	8488	3350	11839
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11841	31.411	NaN	52730	30	0	6968.5	0.106				-1	 	0	106	458.74739396945813	915.4802350057163	2	458.7478332519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8489	3350	11839
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11842	31.412	NaN	22684	30	0	6713.4	0.106	+			32717	RALLGCAKAES	11	81	559.8027732733884	1117.5909936135768	2	559.8038940429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RALLGCAKAES_	ENSG00000072310|ENST00000261646|SREBF1;ENST00000395756.5_1_17:17715938-17721122:-|nuORF;nc|ENSG00000072310|P36956-2|SREBF1;nc|ENSG00000072310|P36956-3|SREBF1;nc|ENSG00000072310|P36956-4|SREBF1	52.936696900407355	0.3865048210802777	4				NaN	NaN	0	NaN	8490	3350	11839
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11843	31.414	NaN	16531	30	0	1407.8	0.106				-1	AIVDAVGTML	10	84	503.2667075786305	1004.518862224061	2	503.2679443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_AIVDAVGTM(Oxidation (M))L_	ENSG00000128965|ENST00000617768|CHAC1;nc|ENSG00000128965|Q9BUX1-2|CHAC1	56.72105179125745	0.3956618550748046	4				NaN	NaN	0	NaN	8491	3350	11839
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11844	31.416	NaN	27213	30	0	6299.8	0.106				-1	 	0	85	529.7950454940357	1057.5755380548712	2	529.796142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8492	3350	11839
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11845	31.418	NaN	19808	30	0	6426.8	0.036	+			48720	VTTTTTTVTK	10	93	526.7957746726396	1051.576996412079	2	526.7967529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTTTTTTVTK_	BPTF|p.D2844Afs*20|1|0.08|ENSG00000171634|chr17:67959766-67959767|-/C|frameshift_variant;BPTF|p.K2718Nfs*36|3|0.12|ENSG00000171634|chr17:67948150-67948150|A/-|frameshift_variant;ENSG00000171634|ENST00000306378|BPTF;nc|ENSG00000171634|Q12830-4|BPTF;nc|ENSG00000171634|Q12830|BPTF	60.11826168202944	0.36476464221954025	4				NaN	NaN	0	NaN	8493	3350	11839
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11846	31.419	NaN	15989	30	0	2922.7	0.143	+			51554	YYEEQHPEL	9	78	604.2666993888695	1206.5188458445389	2	604.267333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YYEEQHPEL_	ENSG00000008517|ENST00000525643|IL32;nc|ENSG00000008517|P24001-3|IL32;nc|ENSG00000008517|P24001-4|IL32;nc|ENSG00000008517|P24001-5|IL32;nc|ENSG00000008517|P24001-6|IL32;nc|ENSG00000008517|P24001|IL32	138.06239232086	0.011389075116295402	4				NaN	NaN	0	NaN	8494	3350	11839
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11859	31.448	NaN	19588	30	0	1518.9	0.214	+			12788	GELTGEVRM	9	81	496.2468181345377	990.4790833358754	2	496.24713134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GELTGEVRM_	ENSG00000128591|ENST00000325888|FLNC;FLNC|p.H2471Tfs*58|1|0.18|ENSG00000128591|chr7:128856767-128856767|C/-|frameshift_variant;FLNC|p.V1896Wfs*57|1|0.04|ENSG00000128591|chr7:128851472-128851472|G/-|frameshift_variant;nc|ENSG00000128591|Q14315-2|FLNC	88.17693792209575	0.07000514020414955	4				NaN	NaN	0	NaN	8504	3353	11858
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11860	31.451	NaN	12370	30	0	4726.7	0.106				-1	 	0	81	572.757255467382	1143.499958001564	2	572.7584838867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8505	3353	11858
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11861	31.453	NaN	13847	30	0	1166.7	0.106	+			4459	ATINNPNLLTK	11	88	599.8430021544701	1197.6714513757402	2	599.8433227539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATINNPNLLTK_	DDX60L|p.A1208Vfs*33|1|0.16|ENSG00000181381|chr4:168395993-168395994|-/CTTTGACA|frameshift_variant;DDX60L|p.F1291Lfs*11|1|0.38|ENSG00000181381|chr4:168391582-168391582|A/-|frameshift_variant;DDX60L|p.N1040Kfs*4|1|0.03|ENSG00000181381|chr4:168406043-168406044|-/AT|frameshift_variant;DDX60L|p.N1168Tfs*25|2|0.3|ENSG00000181381|chr4:168396113-168396113|T/-|frameshift_variant;DDX60L|p.N1642Mfs*9|1|0.2|ENSG00000181381|chr4:168371615-168371615|T/-|frameshift_variant;DDX60L|p.R1122Efs*29|1|0.05|ENSG00000181381|chr4:168400953-168400953|T/-|frameshift_variant;ENSG00000181381|ENST00000682922|DDX60L;nc|ENSG00000181381|Q5H9U9-2|DDX60L	120.63048641472336	0.018968965619156397	4				NaN	NaN	0	NaN	8506	3353	11858
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11862	31.455	NaN	12586	30	0	1589.8	0.106	+			25313	LPAQKTEVF	9	80	516.7880233651198	1031.5614937970395	2	516.7894287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LPAQKTEVF_	ENSG00000158125|ENST00000379416|XDH;XDH|p.P555Qfs*67|1|0.27|ENSG00000158125|chr2:31373895-31373895|G/-|frameshift_variant;XDH|p.Q919Rfs*10|1|0.37|ENSG00000158125|chr2:31350104-31350104|C/-|frameshift_variant	85.16082228582465	0.07850854922700509	4				NaN	NaN	0	NaN	8507	3353	11858
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11863	31.457	NaN	16913	30	0	1815.3	0.106			+	26240	LSSRADLSLI	10	89	537.810683941152	1073.6068149491039	2	537.8117065429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSSRADLSLI_	REV__ENSG00000158008|ENST00000374280|EXTL1	85.86182877749512	0.1547657473298402	4				NaN	NaN	0	NaN	8508	3353	11858
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11864	31.459	NaN	10333	30	0	971.76	0.037	+			45566	TYMGHTGAVW	10	89	569.7524527546843	1137.4903525761686	2	569.75341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_TYM(Oxidation (M))GHTGAVW_	ENSG00000084623|ENST00000677711|EIF3I;ENST00000474371.1_1_1:32688150-32694122:+|nuORF;ENST00000489353.5_1_1:32688042-32691823:+|nuORF	66.42927471994793	0.3073667423445326	4				NaN	NaN	0	NaN	8509	3353	11858
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11865	31.459	NaN	18358	30	0	2846.2	0.141	+			2927	ASCQYSLLK	9	83	535.270428813348	1068.5263046934958	2	535.2714233398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_ASC(Carbamidomethyl (C))QYSLLK_	ENSG00000100731|ENST00000304743|PCNX1;ENSG00000135749|ENST00000258229|PCNX2;ENSG00000197136|ENST00000355703|PCNX3;ENST00000324142.4_1_1:233337898-233388268:-|nuORF;ENST00000475463.6_1_1:233201380-233353905:-|nuORF;ENST00000519530.1_1_1:233353734-233362997:-|nuORF;nc|ENSG00000100731|Q96RV3-3|PCNX1;nc|ENSG00000100731|Q96RV3-4|PCNX1;nc|ENSG00000135749|A6NKB5-2|PCNX2;nc|ENSG00000135749|A6NKB5-5|PCNX2;nc|ENSG00000197136|Q9H6A9-2|PCNX3	199.8913184727681	3.377773596966937E-05	4				NaN	NaN	0	NaN	8510	3353	11858
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11881	31.494	NaN	45187	30	0	15123	0.205				-1	NLLKMVRDN	9	92	373.537833672665	1117.591671618195	3	373.5379638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_NLLKM(Oxidation (M))VRDN_	ENSG00000115020|ENST00000264380|PIKFYVE	44.377184641726394	0.36891676396732553	4				NaN	NaN	0	NaN	8523	3356	11880
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11882	31.497	NaN	32817	30	0	8308.2	0.106			+	31036	QEVDVKEL	8	74	480.2555363756384	958.4965198180769	2	480.2557678222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QEVDVKEL_	REV__ENSG00000187446|ENST00000334660|CHP1;REV__ENST00000558351.5_1_15:41556426-41571584:+|nuORF	85.16082228582465	0.29211966821764696	4				NaN	NaN	0	NaN	8524	3356	11880
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11883	31.499	NaN	17516	30	0	1672.7	0.106	+			13028	GEVLRTNQF	9	83	532.2800846366318	1062.5456163400636	2	532.279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEVLRTNQF_	ENSG00000125991|ENST00000348547|ERGIC3;nc|ENSG00000125991|Q9Y282-3|ERGIC3	83.6470233535746	0.08277643980271215	4				NaN	NaN	0	NaN	8525	3356	11880
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11884	31.501	NaN	29588	30	0	4018.3	0.106			+	12993	GEVDDKFLE	9	91	526.2507932963982	1050.4870336595964	2	526.2512817382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEVDDKFLE_	REV__CHD5|p.P1887Rfs*14|1|0.5|ENSG00000116254|chr1:6106698-6106698|G/-|frameshift_variant;REV__ENSG00000116254|ENST00000262450|CHD5	74.25504064058377	0.12238981753128622	4				NaN	NaN	0	NaN	8526	3356	11880
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11885	31.503	NaN	10941	30	0	1061.7	0.106				-1	LMRQMREL	8	78	546.7868565719795	1091.5591602107588	2	546.7879028320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_LMRQM(Oxidation (M))REL_	ENSG00000175084|ENST00000373960|DES	71.29570347882199	0.39610197767395533	4				NaN	NaN	0	NaN	8527	3356	11880
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11886	31.505	NaN	6254.3	30	0	1240.2	0.106				-1	 	0	81	455.29154132076513	908.5685297083303	2	455.2918395996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8528	3356	11880
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11887	31.506	NaN	4497.7	30	0	654.53	0.034	+			7902	DSAGERACK	9	62	468.71350500886206	935.4124570845241	2	468.714111328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DSAGERACK_	ENSG00000159915|ENST00000683810|ZNF233	26.69291269510374	0.5537881896960711	4				NaN	NaN	0	NaN	8529	3356	11880
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11899	31.532	NaN	19198	30	0	1099.1	0.214	+			46376	VELAESRAL	9	93	494.27705935057213	986.5395657679443	2	494.2774963378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VELAESRAL_	ENST00000340533.8_2_18:71959085-71959217:-|nuORF	72.87924865735499	0.12833875048249987	4				NaN	NaN	0	NaN	8538	3359	11898
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11900	31.535	NaN	24575	30	0	3630.7	0.106	+			35408	SAQSFFENK	9	80	529.2506420490536	1056.486731164907	2	529.2517700195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAQSFFENK_	ENSG00000136758|ENST00000376016|YME1L1;nc|ENSG00000136758|Q96TA2-3|YME1L1;nc|ENSG00000136758|Q96TA2|YME1L1;YME1L1|p.N311Tfs*18|1|0.26|ENSG00000136758|chr10:27134053-27134053|T/-|frameshift_variant	125.71293069911285	0.017741295328254008	4				NaN	NaN	0	NaN	8539	3359	11898
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11901	31.537	NaN	12415	30	0	1044.9	0.106	+			50435	YACEVTHQGL	10	77	560.7578425787426	1119.5011322242851	2	560.7591552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YACEVTHQGL_	nc|ENSG00000211592|P01834|IGKC	91.26522074875469	0.12383023862516404	4				NaN	NaN	0	NaN	8540	3359	11898
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11902	31.539	NaN	7981.4	30	0	710.79	0.106	+			35377	SAPSTQQVL	9	73	465.7477082406399	929.4808635480798	2	465.74798583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SAPSTQQVL_	ENSG00000106290|ENST00000453269|TAF6;nc|ENSG00000106290|P49848-2|TAF6;nc|ENSG00000106290|P49848-3|TAF6;nc|ENSG00000106290|P49848-4|TAF6	95.81516180277367	0.04847050768394289	4				NaN	NaN	0	NaN	8541	3359	11898
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11903	31.541	NaN	23230	30	0	8450.2	0.106				-1	 	0	75	423.2156245722739	844.4166962113478	2	423.21600341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8542	3359	11898
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11904	31.543	NaN	5443.3	30	0	1649.2	0.033				-1	 	0	73	450.2340920346054	898.4536311360108	2	450.234619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8543	3359	11898
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11905	31.543	NaN	8014	30	0	2265.8	0.142				-1	 	0	61	343.1971182541532	342.18984178755323	1	343.1978759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8544	3359	11898
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11923	31.582	NaN	82224	30	0	13301	0.214	+			11	AAAAPTEL	8	84	372.20158875049253	742.3886245677851	2	372.20159912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAAAPTEL_	ENSG00000198431|ENST00000525566|TXNRD1;ENST00000525566.5_2_12:104609571-104742190:+|nuORF	28.2542754592877	0.7411748056684583	4				NaN	NaN	0	NaN	8559	3362	11922
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11924	31.586	NaN	162430	30	0	122850	0.106				-1	 	0	89	350.2062499793319	698.3979470254638	2	350.2066955566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8560	3362	11922
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11925	31.588	NaN	59666	30	0	13247	0.106				-1	 	0	103	458.26588987949424	914.5172268257885	2	458.26617431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8561	3362	11922
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11926	31.59	NaN	61929	30	0	8757.8	0.106			+	101	AADSETKKIIQ	11	88	602.3321919898157	1202.6498310464312	2	602.3327026367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AADSETKKIIQ_	REV__ENSG00000186951|ENST00000407236|PPARA	93.1432384553994	0.08590712355761482	4				NaN	NaN	0	NaN	8562	3362	11922
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11927	31.591	NaN	10302	30	0	2639.3	0.106	+			48935	VVEGSFVYK	9	70	514.2763028999758	1026.5380528667515	2	514.276611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVEGSFVYK_	ENSG00000203879|ENST00000447750|GDI1;ENST00000491154.1_1_X:153666748-153668487:+|nuORF;GDI1|p.G114D|1|0.12|ENSG00000203879|chrX:154439093-154439093|G/A|missense_variant	58.22992032128504	0.22837015374068087	4				NaN	NaN	0	NaN	8563	3362	11922
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11928	31.593	NaN	4582	30	0	1758.9	0.032	+			46204	VEAEPSVP	8	63	414.21016335598404	826.4057737787681	2	414.2106018066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VEAEPSVP_	ENST00000348354.6_1_21:18981451-18985174:-|nuORF	52.29916861842294	0.578018602984656	4				NaN	NaN	0	NaN	8564	3362	11922
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11929	31.594	NaN	15326	30	0	2018.2	0.141	+			934	AEILQESRM	9	82	538.7738151515739	NaN	0	538.7742919921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AEILQESRM_	ENSG00000171530|ENST00000380377|TBCA;ENST00000436520.1_1_X:33059580-33059835:+|nuORF;nc|ENSG00000171530|O75347-2|TBCA	131.61620852596164	0.00033844070914861534	4				NaN	NaN	0	NaN	8565	3362	11922
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11947	31.632	NaN	344940	30	0	58540	0.134			+	26229	LSSLTHDAKQ	10	93	550.2915656097358	1098.5685782862715	2	550.29248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSSLTHDAKQ_	REV__ENSG00000162819|ENST00000340934|BROX;REV__nc|ENSG00000162819|Q5VW32-2|BROX	90.36981228632155	0.12895663264417576	4				NaN	NaN	0	NaN	8580	3365	11946
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11948	31.635	NaN	39097	30	0	3110.2	0.106				-1	 	0	86	466.2576314797769	930.5007100263538	2	466.258056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8581	3365	11946
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11949	31.637	NaN	10703	30	0	768.76	0.106			+	23971	LDTVVVDAR	9	74	494.27705935057213	986.5395657679443	2	495.2795104980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LDTVVVDAR_	REV__ENST00000484763.1_1_14:50582563-50582965:-|nuORF;REV__nc|ENSG00000100483|Q9H867-2|VCPKMT	39.252832667884924	0.4290233611298554	4				NaN	NaN	0	NaN	8582	3365	11946
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11950	31.638	NaN	7628.4	30	0	1785.4	0.106	+			8977	EFLTKTAKF	9	81	542.8048159541028	1083.5950789750054	2	542.8057861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EFLTKTAKF_	ENSG00000100796|ENST00000554943|PPP4R3A;ENSG00000275052|ENST00000616407|PPP4R3B;ENST00000554574.1_1_14:91942052-91948315:-|nuORF;nc|ENSG00000100796|Q6IN85-2|PPP4R3A;nc|ENSG00000100796|Q6IN85-5|PPP4R3A;nc|ENSG00000275052|Q5MIZ7-2|PPP4R3B;nc|ENSG00000275052|Q5MIZ7-3|PPP4R3B	67.49366992349736	0.1516260258713357	4				NaN	NaN	0	NaN	8583	3365	11946
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11951	31.64	NaN	24127	30	0	8447.3	0.106				-1	 	0	77	367.19719402287075	1098.5697526688123	3	367.1976318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8584	3365	11946
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11952	31.642	NaN	10705	30	0	770.69	0.106	+			27832	MSSPCHIEM	9	81	546.2183231688242	1090.4220934044483	2	546.2198486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_MSSPC(Carbamidomethyl (C))HIEM_	ENSG00000265681|ENST00000580261|RPL17;ENST00000414070.1_1_1:109535017-109535455:+|nuORF;ENST00000446498.1_1_1:26781156-26781564:-|nuORF;ENST00000452862.1_1_3:197577273-197577471:-|nuORF;ENST00000498256.1_1_8:29489773-29490157:+|nuORF;nc|ENSG00000265681|P18621-2|RPL17;nc|ENSG00000265681|P18621-3|RPL17	56.72105179125745	0.24094814563026265	4				NaN	NaN	0	NaN	8585	3365	11946
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11953	31.644	NaN	9275.3	30	0	1078.5	0.034	+			2234	ALSNPILNK	9	76	485.28935427159837	968.5641556099968	2	485.28973388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ALSNPILNK_	ENSG00000132436|ENST00000433017|FIGNL1;FIGNL1|p.K309Sfs*16|2|0.21|ENSG00000132436|chr7:50446362-50446362|T/-|frameshift_variant;nc|ENSG00000132436|Q6PIW4-2|FIGNL1	75.04331003522576	0.118981335847003	4				NaN	NaN	0	NaN	8586	3365	11946
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11970	31.678	NaN	16149	30	0	2230.9	0.214				-1	 	0	84	511.2343529589725	510.22707649237253	1	511.2348937988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8600	3368	11969
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11971	31.682	NaN	9037.2	30	0	3841.4	0.106				-1	 	0	64	412.24919667976906	822.4838404263381	2	412.24969482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8601	3368	11969
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11972	31.684	NaN	8246.1	30	0	1031.8	0.106	+			7771	DPDATSLKY	9	79	505.24504015540043	1008.4755273776009	2	505.2451477050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DPDATSLKY_	ENSG00000131778|ENST00000369258|CHD1L;nc|ENSG00000131778|Q86WJ1-2|CHD1L;nc|ENSG00000131778|Q86WJ1-3|CHD1L;nc|ENSG00000131778|Q86WJ1-4|CHD1L;nc|ENSG00000131778|Q86WJ1-5|CHD1L	101.25262130126117	0.03792372629710479	4				NaN	NaN	0	NaN	8602	3368	11969
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11973	31.685	NaN	7175.9	30	0	838.97	0.106	+			17444	IAVNKAGP	8	60	385.23143829990744	768.4483236666149	2	385.2319030761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IAVNKAGP_	ENSG00000179057|ENST00000513874|IGSF22;nc|ENSG00000179057|Q8N9C0|IGSF22	31.57888975003103	0.7155046476286219	4				NaN	NaN	0	NaN	8603	3368	11969
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11974	31.687	NaN	7617.5	30	0	875.9	0.106				-1	 	0	63	336.53376358563514	1006.5794613571054	3	336.53424072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8604	3368	11969
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11975	31.689	NaN	6704.3	30	0	2065.1	0.034	+			12851	GEPFASHSL	9	78	472.7266716063347	943.4387902794695	2	472.7267761230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GEPFASHSL_	ENSG00000089682|ENST00000685964|RBM41;nc|ENSG00000089682|Q96IZ5-2|RBM41;nc|ENSG00000089682|Q96IZ5|RBM41;RBM41|p.M298Vfs*5|1|0.21|ENSG00000089682|chrX:107088470-107088471|AT/-|frameshift_variant	53.351449002276354	0.2690372970092375	4				NaN	NaN	0	NaN	8605	3368	11969
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11976	31.69	NaN	9116.2	30	0	2020.6	0.142	+			34837	RYPDSHQLF	9	72	581.7852314950363	1161.5559100568726	2	581.7860107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RYPDSHQLF_	ENSG00000138757|ENST00000359707|G3BP2;nc|ENSG00000138757|Q9UN86-2|G3BP2	49.536043120802724	0.308405419312776	4				NaN	NaN	0	NaN	8606	3368	11969
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11994	31.729	NaN	15860	30	0	948.49	0.214	+			10636	EYNTVASKF	9	82	529.7592486583153	1057.5039443834305	2	529.7600708007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EYNTVASKF_	ENSG00000173193|ENST00000474629|PARP14;ENST00000475640.1_1_3:122437249-122439770:+|nuORF;nc|ENSG00000173193|Q460N5-1|PARP14;nc|ENSG00000173193|Q460N5-3|PARP14;nc|ENSG00000173193|Q460N5-4|PARP14;nc|ENSG00000173193|Q460N5-5|PARP14	90.60085204095205	0.06317133949006545	4				NaN	NaN	0	NaN	8621	3371	11993
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11995	31.733	NaN	6993.7	30	0	630.68	0.106			+	6763	CEGARKTKMR	10	74	626.8166913888106	1251.618829844421	2	626.8175048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_C(Carbamidomethyl (C))EGARKTKM(Oxidation (M))R_	REV__ENST00000534591.1_1_11:64876790-64877821:+|nuORF	85.16082228582465	0.15877915086237185	4				NaN	NaN	0	NaN	8622	3371	11993
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11996	31.735	NaN	11948	30	0	1009.7	0.106				-1	 	0	84	589.8146997910396	1177.6148466488792	2	589.8157348632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8623	3371	11993
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11997	31.736	NaN	9943.6	30	0	1367	0.106			+	23845	LDAHCSIR	8	72	457.73047412584106	913.4463953184821	2	457.7321472167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LDAHCSIR_	REV__ENSG00000064655|ENST00000327619|EYA2;REV__nc|ENSG00000064655|O00167-2|EYA2;REV__nc|ENSG00000064655|O00167-3|EYA2	40.5726180659479	0.6527593143185008	4				NaN	NaN	0	NaN	8624	3371	11993
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11998	31.738	NaN	5635.6	30	0	444.7	0.106			+	37410	SLGGNRRQGG	10	74	501.26613940950136	1000.5177258858027	2	501.2666931152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SLGGNRRQGG_	REV__ENST00000358912.4_1_2:64335509-64371369:-|nuORF;REV__ENST00000468869.2_1_2:64370626-64371369:-|nuORF	70.8162118820467	0.27065172005956	4				NaN	NaN	0	NaN	8625	3371	11993
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11999	31.74	NaN	10069	30	0	810.48	0.036	+			20969	KKEISPGVMI	10	81	559.317241494228	1116.619930055256	2	559.3184814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_KKEISPGVM(Oxidation (M))I_	CHD9|p.F760Lfs*16|3|0.47|ENSG00000177200|chr16:53229088-53229088|T/-|frameshift_variant;CHD9|p.M2707Tfs*40|1|0.1|ENSG00000177200|chr16:53324320-53324321|-/C|frameshift_variant;CHD9|p.N1798Tfs*17|1|0.12|ENSG00000177200|chr16:53292931-53292931|A/-|frameshift_variant;CHD9|p.R2541Kfs*9|1|0.11|ENSG00000177200|chr16:53318242-53318243|-/A|frameshift_variant;CHD9|p.R2632Dfs*28|1|0.35|ENSG00000177200|chr16:53324090-53324090|G/-|frameshift_variant;ENSG00000177200|ENST00000447540|CHD9;nc|ENSG00000177200|Q3L8U1-2|CHD9;nc|ENSG00000177200|Q3L8U1-3|CHD9	104.0567914643314	0.06564926686336217	4				NaN	NaN	0	NaN	8626	3371	11993
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12000	31.741	NaN	25900	30	0	2616.1	0.141				-1	 	0	84	544.8077649492355	1087.600976965271	2	544.8085327148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8627	3371	11993
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12015	31.773	NaN	29941	30	0	4951.1	0.214	+			48552	VTNWDDMEK	9	98	569.246631771106	1136.4787106090118	2	569.2478637695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTNWDDMEK_	ACTB|p.I85T|1|0.1|ENSG00000075624|chr7:5529270-5529270|A/G|missense_variant;ENSG00000075624|ENST00000646664|ACTB;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENST00000436287.1_1_1:224052226-224052508:-|nuORF;ENST00000457622.1_1_6:46172676-46173294:+|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000502306.1_1_5:15450853-15451165:+|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF	174.8648734531126	0.001936507438084573	4				NaN	NaN	0	NaN	8639	3374	12014
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12016	31.777	NaN	34843	30	0	26635	0.106				-1	 	0	75	485.2712572529614	968.5279615727228	2	485.2715759277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8640	3374	12014
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12017	31.779	NaN	21131	30	0	5366	0.106				-1	 	0	61	363.5408968671234	1087.6008612015703	3	363.5413818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8641	3374	12014
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12018	31.781	NaN	22807	30	0	3092.8	0.106	+			51186	YPIEHGIITN	10	100	578.8027509338458	1155.5909489344915	2	578.8036499023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YPIEHGIITN_	ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENST00000473016.1_1_2:74120109-74129648:+|nuORF;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000488967.5_1_10:90706975-90712518:-|nuORF	59.93077597824379	0.36646980200755325	4				NaN	NaN	0	NaN	8642	3374	12014
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12019	31.782	NaN	6526.8	30	0	2587.5	0.106			+	18594	ISQHNSVI	8	50	449.2425776069114	896.4706022806229	2	449.2427673339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ISQHNSVI_	REV__ENSG00000169692|ENST00000371696|AGPAT2;REV__ENST00000470861.1_1_9:139571827-139581809:-|nuORF;REV__nc|ENSG00000169692|O15120-2|AGPAT2	56.72105179125745	0.5342425954139568	4				NaN	NaN	0	NaN	8643	3374	12014
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12020	31.784	NaN	8198.3	30	0	2343	0.034			+	44247	TRYPGPGPL	9	71	479.26046190291197	956.506370872624	2	479.2608642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TRYPGPGPL_	REV__nc|ENSG00000241350|Q13670|PMS2P11	45.9519527083369	0.35044536499095585	4				NaN	NaN	0	NaN	8644	3374	12014
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12021	31.785	NaN	7222.9	30	0	934.29	0.14	+			38521	SSCGSVLFH	9	70	497.22607537375274	992.4375978143055	2	497.2264404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_SSC(Carbamidomethyl (C))GSVLFH_	ENSG00000136636|ENST00000259154|KCTD3;KCTD3|p.G267Efs*15|1|0.26|ENSG00000136636|chr1:215586664-215586664|G/-|frameshift_variant;KCTD3|p.R348Afs*5|1|0.41|ENSG00000136636|chr1:215602097-215602098|-/C|frameshift_variant;nc|ENSG00000136636|Q9Y597-2|KCTD3	65.80317337860623	0.1652391959156183	4				NaN	NaN	0	NaN	8645	3374	12014
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12037	31.82	NaN	22617	30	0	3618.8	0.214	+			19767	KEAERTAEL	9	92	523.7777989706249	NaN	0	523.77783203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEAERTAEL_	CEP290|p.E1553Kfs*4|1|0.52|ENSG00000198707|chr12:88084634-88084634|T/-|frameshift_variant;CEP290|p.I2385*|1|0.37|ENSG00000198707|chr12:88050410-88050410|T/-|frameshift_variant;CEP290|p.L2448Tfs*8|1|0.11|ENSG00000198707|chr12:88049282-88049283|-/T|frameshift_variant;CEP290|p.M1079Cfs*9|1|0.24|ENSG00000198707|chr12:88093844-88093844|T/-|frameshift_variant;CEP290|p.N882Ifs*10|1|0.2|ENSG00000198707|chr12:88106847-88106847|T/-|frameshift_variant;CEP290|p.R2306Nfs*40|1|0.14|ENSG00000198707|chr12:88055616-88055619|TCTC/-|frameshift_variant;ENSG00000198707|ENST00000552810|CEP290	107.00750918261382	0.012399597248013027	4				NaN	NaN	0	NaN	8658	3377	12036
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12038	31.824	NaN	28056	30	0	3745.7	0.106				-1	 	0	68	432.69732834273174	863.3801037522635	2	432.6977233886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8659	3377	12036
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12039	31.826	NaN	25822	30	0	5867.4	0.106				-1	 	0	71	382.56056251728415	1144.6598581520525	3	382.5606994628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8660	3377	12036
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12040	31.827	NaN	7985.3	30	0	410.5	0.106	+			27078	MAIEAQQKF	9	78	533.2744852878863	1064.5344176425724	2	533.27392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MAIEAQQKF_	ENST00000457761.6_1_2:172821936-172844354:+|nuORF	120.8684288430529	0.02067403653475984	4				NaN	NaN	0	NaN	8661	3377	12036
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12041	31.829	NaN	4874	30	0	443.15	0.106			+	32645	QYVSCFPSHP	10	74	611.2722102990218	1220.5298676648436	2	611.2728881835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_QYVSC(Carbamidomethyl (C))FPSHP_	REV__chr1:152984125-152985198|126|31.17|0.0|21.57|+|0|SPRR1A,SPRR1A|1;REV__chr1:152984125-152985212|122|36.73|0.0|21.81|+|0|SPRR1A,SPRR1A|1	47.657333605630114	0.47858658696240314	4				NaN	NaN	0	NaN	8662	3377	12036
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12042	31.831	NaN	22951	30	0	2978.3	0.036	+			1219	AEQKVEYTL	9	83	540.7810092382427	1079.5474655432854	2	540.7823486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEQKVEYTL_	ENSG00000114867|ENST00000346169|EIF4G1;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;ENST00000460829.5_1_3:184046782-184052693:+|nuORF;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1	123.20810148215591	0.019257656778428764	4				NaN	NaN	0	NaN	8663	3377	12036
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12043	31.832	NaN	6087.1	30	0	1802.2	0.142				-1	 	0	72	572.757255467382	1143.499958001564	2	572.758544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8664	3377	12036
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12061	31.871	NaN	86325	30	0	26758	0.214				-1	 	0	89	473.7890871518909	945.5636213705818	2	473.78924560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8679	3380	12060
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12062	31.875	NaN	20637	30	0	4515.1	0.106				-1	 	0	83	463.24350332895773	924.4724537247155	2	463.24371337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8680	3380	12060
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12063	31.877	NaN	9701.5	30	0	4160.9	0.106				-1	 	0	56	345.8471689624191	1034.5196774874573	3	345.8476867675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8681	3380	12060
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12064	31.878	NaN	5268.1	30	0	3514.7	0.106	+			24721	LHNPTRVK	8	50	322.1935235579135	NaN	0	322.19354248046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LHNPTRVK_	ENSG00000204681|ENST00000377034|GABBR1;ENST00000472823.5_1_6:29576484-29596894:-|nuORF;GABBR1|p.A575Sfs*2|3|0.31|ENSG00000204681|chr6:29609366-29609367|-/G|frameshift_variant;GABBR1|p.P574Qfs*32|1|0.18|ENSG00000204681|chr6:29609367-29609367|G/-|frameshift_variant;nc|ENSG00000204681|Q9UBS5-2|GABBR1;nc|ENSG00000204681|Q9UBS5-3|GABBR1;nc|ENSG00000204681|Q9UBS5-4|GABBR1;nc|ENSG00000204681|Q9UBS5-5|GABBR1	16.473147378115264	1.7418937515398478	4				NaN	NaN	0	NaN	8682	3380	12060
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12065	31.88	NaN	10001	30	0	3936.9	0.106				-1	ASCPRSLRDT	10	56	388.19268278995935	1161.5562189700781	3	388.1927490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_ASC(Carbamidomethyl (C))PRSLRDT_	ENST00000335565.4_2_X:144903251-144903611:+|nuORF;ENST00000370490.1_1_X:144903476-144903611:+|nuORF	26.063383197487333	0.6669871633831898	4				NaN	NaN	0	NaN	8683	3380	12060
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12066	31.882	NaN	12671	30	0	1697.1	0.037				-1	 	0	74	573.3366986455756	1144.658844357951	2	573.3375854492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8684	3380	12060
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12067	31.883	NaN	11357	30	0	1276.6	0.141			+	2308	AMGPKINVVF	10	89	538.3028844943063	NaN	0	538.3029174804688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AMGPKINVVF_	REV__TRPA1|p.L736F|1|0.3|ENSG00000104321|chr8:72038954-72038954|G/A|missense_variant	45.9519527083369	0.331194823726099	4				NaN	NaN	0	NaN	8685	3380	12060
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12085	31.922	NaN	35446	30	0	8131.9	0.215				-1	 	0	97	362.8811806054778	1085.6217124166335	3	362.8817138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8700	3383	12084
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12086	31.925	NaN	46998	30	0	5206	0.106				-1	 	0	105	480.2732940528344	958.5320351724688	2	480.27362060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8701	3383	12084
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12087	31.927	NaN	14302	30	0	1482.4	0.106			+	-1	ESIQCHFSI	9	86	560.7578425787426	1119.5011322242851	2	560.760009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_ESIQC(Carbamidomethyl (C))HFSI_	REV__ENST00000476355.5_1_7:14027842-14028049:-|nuORF	54.776311868738084	0.25715957988447635	4				NaN	NaN	0	NaN	8702	3383	12084
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12088	31.929	NaN	19633	30	0	2254.3	0.106			+	11812	FSSVCVSSLM	10	90	538.2449005833449	1074.4752482334898	2	538.2472534179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_FSSVCVSSLM(Oxidation (M))_	REV__ENSG00000131398|ENST00000477616|KCNC3;REV__KCNC3|p.G627Efs*27|3|0.37|ENSG00000131398|chr19:50323073-50323073|C/-|frameshift_variant;REV__KCNC3|p.V354Cfs*74|1|0.26|ENSG00000131398|chr19:50323893-50323893|C/-|frameshift_variant	66.42927471994793	0.3073667423445326	4				NaN	NaN	0	NaN	8703	3383	12084
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12089	31.931	NaN	9644.9	30	0	2002.4	0.106	+			50834	YETKTALL	8	80	469.76226653143647	937.509980129673	2	469.7630615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YETKTALL_	ENSG00000100242|ENST00000689035|SUN2;nc|ENSG00000100242|Q9UH99-2|SUN2;nc|ENSG00000100242|Q9UH99-3|SUN2	56.72105179125745	0.5342425954139568	4				NaN	NaN	0	NaN	8704	3383	12084
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12090	31.933	NaN	10391	30	0	863.55	0.036			+	27616	MPPAQIQSPP	10	85	533.2744852878863	1064.5344176425724	2	533.7799682617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MPPAQIQSPP_	REV__ENSG00000084463|ENST00000261167|WBP11	37.81151784470057	0.569310847604193	4				NaN	NaN	0	NaN	8705	3383	12084
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12091	31.933	NaN	7740.6	30	0	1010.8	0.14			+	-1	FKSSSQMII	9	78	528.7721018803494	1055.5296508274987	2	528.7721557617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_FKSSSQM(Oxidation (M))II_	REV__ENSG00000131023|ENST00000543571|LATS1;REV__ENST00000441107.5_1_6:149982867-150018260:-|nuORF;REV__ENST00000542747.5_1_6:149997344-150023094:-|nuORF;REV__LATS1|p.E689Nfs*18|1|0.35|ENSG00000131023|chr6:149680404-149680404|T/-|frameshift_variant;REV__LATS1|p.F1039Lfs*19|1|0.19|ENSG00000131023|chr6:149662005-149662005|A/-|frameshift_variant;REV__LATS1|p.K662Nfs*3|1|0.44|ENSG00000131023|chr6:149683103-149683103|T/-|frameshift_variant;REV__LATS1|p.Y808Nfs*12|1|0.09|ENSG00000131023|chr6:149680046-149680047|-/ATTTATT|frameshift_variant;REV__nc|ENSG00000131023|O95835-2|LATS1	39.252832667884924	0.4290233611298554	4				NaN	NaN	0	NaN	8706	3383	12084
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12108	31.97	NaN	47899	30	0	6309.6	0.214	+			12667	GEITGEVHM	9	92	486.72569587219203	971.4368388111841	2	486.7261657714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEITGEVHM_	ENSG00000136068|ENST00000295956|FLNB;ENST00000481470.5_1_3:58118395-58154450:+|nuORF;nc|ENSG00000136068|O75369-2|FLNB;nc|ENSG00000136068|O75369-3|FLNB;nc|ENSG00000136068|O75369-4|FLNB;nc|ENSG00000136068|O75369-5|FLNB;nc|ENSG00000136068|O75369-6|FLNB;nc|ENSG00000136068|O75369-7|FLNB;nc|ENSG00000136068|O75369-8|FLNB;nc|ENSG00000136068|O75369-9|FLNB	133.8126618989323	0.013382794002272486	4				NaN	NaN	0	NaN	8720	3386	12107
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12109	31.973	NaN	21818	30	0	10785	0.106				-1	 	0	69	350.2062499793319	698.3979470254638	2	350.20672607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8721	3386	12107
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12110	31.975	NaN	16294	30	0	8109.5	0.106	+			6122	AVPLTIRGP	9	74	462.286463385917	922.558373838634	2	462.28692626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVPLTIRGP_	ENST00000577043.1_1_16:2867692-2871170:+|nuORF	51.33545320467046	0.2872990594074956	4				NaN	NaN	0	NaN	8722	3386	12107
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12111	31.977	NaN	10554	30	0	655.07	0.106	+			51495	YVLKGHIAVS	10	88	543.8184944233642	1085.6224359135283	2	543.8197021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YVLKGHIAVS_	ENSG00000108039|ENST00000502935|XPNPEP1;nc|ENSG00000108039|Q9NQW7-2|XPNPEP1;nc|ENSG00000108039|Q9NQW7-4|XPNPEP1;nc|ENSG00000108039|Q9NQW7|XPNPEP1	62.107414245175825	0.3466735403679669	4				NaN	NaN	0	NaN	8723	3386	12107
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12112	31.979	NaN	49289	30	0	8487.8	0.106	+			42816	TEARFGAQL	9	104	496.7608673837495	991.507181834299	2	496.7615661621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TEARFGAQL_	CON__P08727;ENSG00000171345|ENST00000361566|KRT19	80.45461616416974	0.09558281504443908	4				NaN	NaN	0	NaN	8724	3386	12107
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12113	31.981	NaN	29013	30	0	5824.2	0.035	+			5439	ATYQTTLLH	9	90	524.2769830916724	1046.5394132501447	2	524.2799072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATYQTTLLH_	ENSG00000003147|ENST00000402384|ICA1;ENST00000562640.1_1_16:22010196-22010523:+|nuORF;ICA1|p.E307Lfs*26|1|0.05|ENSG00000003147|chr7:8141801-8141802|-/TTTTTCAA|frameshift_variant;nc|ENSG00000003147|Q05084-2|ICA1;nc|ENSG00000003147|Q05084-3|ICA1	96.0336014099291	0.047854655524928534	4				NaN	NaN	0	NaN	8725	3386	12107
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12114	31.981	NaN	8829.8	30	0	1196.3	0.139	+			36198	SELLITKA	8	62	437.76529908987266	873.5160452465453	2	437.7654724121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SELLITKA_	ENSG00000197879|ENST00000648651|MYO1C;nc|ENSG00000197879|O00159-2|MYO1C;nc|ENSG00000197879|O00159-3|MYO1C	87.69643885390035	0.28444366722805053	4				NaN	NaN	0	NaN	8726	3386	12107
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12126	32.009	NaN	23584	30	0	3998.3	0.214				-1	 	0	82	548.217996326525	1094.42143971985	2	548.2190551757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8735	3389	12125
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12127	32.012	NaN	17398	30	0	2689	0.106	+			9583	ELKDRLQY	8	86	532.7897288308517	1063.5649047285033	2	532.790771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ELKDRLQY_	nc|ENSG00000090863|Q92896-2|GLG1;nc|ENSG00000090863|Q92896-3|GLG1	54.776311868738084	0.5534952410049249	4				NaN	NaN	0	NaN	8736	3389	12125
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12128	32.014	NaN	24032	30	0	4278.1	0.106	+			1320	AETEPIVKM	9	91	509.2671185973728	1016.5196842615456	2	509.2677001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AETEPIVKM_	ENSG00000104408|ENST00000220849|EIF3E;ENST00000518442.5_1_8:109247181-109261015:-|nuORF	110.11987700582712	0.028875675806141952	4				NaN	NaN	0	NaN	8737	3389	12125
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12129	32.016	NaN	32797	30	0	6209.2	0.106	+			1138	AEMAQNAVRL	10	96	551.7866977464907	1101.5588425597814	2	551.7879028320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEMAQNAVRL_	ENSG00000168036|ENST00000349496|CTNNB1	143.37361013837676	0.009854612225601756	4				NaN	NaN	0	NaN	8738	3389	12125
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12130	32.018	NaN	14741	30	0	2209	0.106	+			40966	SVGEKIFKT	9	88	504.78951649532763	1007.5644800574553	2	504.7899169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVGEKIFKT_	ENSG00000133661|ENST00000372292|SFTPD	69.6276240434122	0.14239879520340665	4				NaN	NaN	0	NaN	8739	3389	12125
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12131	32.02	NaN	11995	30	0	1609.4	0.033	+			647	AEAEASSPK	9	81	445.2165392823214	888.4185256314428	2	445.2169189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEAEASSPK_	ENSG00000124942|ENST00000378024|AHNAK;ENST00000525875.1_1_11:62201326-62284770:-|nuORF	60.11826168202944	0.21262886028301267	4				NaN	NaN	0	NaN	8740	3389	12125
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12132	32.02	NaN	6359.2	30	0	798.47	0.14	+			43681	TKEEYVEK	8	72	513.2602882698806	1024.506023606561	2	513.260986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TKEEYVEK_	tr|U7SUI5|U7SUI5_FUSNUTIGR01212familyradicalSAMproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01174PE=4SV=1	51.33545320467046	0.5859736979383976	4				NaN	NaN	0	NaN	8741	3389	12125
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12149	32.057	NaN	30210	30	0	18989	0.214				-1	 	0	64	335.21435966646754	1002.6212495996026	3	335.21478271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8755	3392	12148
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12150	32.061	NaN	17463	30	0	7889.6	0.106	+			22882	KVLLDRLF	8	76	502.3180151742179	1002.6214774152359	2	502.3183898925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVLLDRLF_	BNC2|p.I188V|1|0.4|ENSG00000173068|chr9:16552637-16552637|T/C|missense_variant	51.33545320467046	0.5859736979383976	4				NaN	NaN	0	NaN	8756	3392	12148
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12151	32.063	NaN	30322	30	0	2480.7	0.106	+			43894	TNFEDRNAF	9	92	557.2511442494958	1112.4877355657916	2	557.2518920898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TNFEDRNAF_	CYFIP1|p.K121Nfs*2|1|0.14|ENSG00000273749|chr15:22944582-22944582|T/-|frameshift_variant;CYFIP2|p.Q484Rfs*7|1|0.08|ENSG00000055163|chr5:157319855-157319856|-/GA|frameshift_variant;ENSG00000055163|ENST00000620254|CYFIP2;ENSG00000273749|ENST00000617928|CYFIP1;nc|ENSG00000055163|Q96F07|CYFIP2	112.10723106719422	0.02684780151337622	4				NaN	NaN	0	NaN	8757	3392	12148
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12152	32.065	NaN	47769	30	0	6443.2	0.106			+	6724	CAKLKKGL	8	92	430.7722484774941	859.5299440217882	2	430.7726745605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_CAKLKKGL_	REV__BRIP1|p.I504Nfs*7|1|0.53|ENSG00000136492|chr17:61784387-61784388|-/T|frameshift_variant;REV__ENSG00000136492|ENST00000259008|BRIP1;REV__nc|ENSG00000136492|Q9BX63-2|BRIP1	60.29395666154354	0.49887135096048313	4				NaN	NaN	0	NaN	8758	3392	12148
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12153	32.066	NaN	14094	30	0	3130.2	0.106	+			34838	RYPDSHQLF	9	81	581.7852314950363	1161.5559100568726	2	581.7857666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RYPDSHQLF_	ENSG00000138757|ENST00000359707|G3BP2;nc|ENSG00000138757|Q9UN86-2|G3BP2	59.93077597824379	0.21419174904018318	4				NaN	NaN	0	NaN	8759	3392	12148
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12154	32.068	NaN	4477.2	30	0	501.24	0.035			+	1676	AGSLRIKLQ	9	62	329.2105991921425	984.6099681766276	3	329.21136474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AGSLRIKLQ_	REV__ENSG00000196544|ENST00000389017|BORCS6	49.536043120802724	0.308405419312776	4				NaN	NaN	0	NaN	8760	3392	12148
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12155	32.069	NaN	8613.6	30	0	999.5	0.14	+			27801	MSDTTFKAL	9	75	515.2492197195629	1028.4838865059257	2	515.2501220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_M(Oxidation (M))SDTTFKAL_	CAPZA1|p.R259H|1|0.31|ENSG00000116489|chr1:112670047-112670047|G/A|missense_variant;CAPZA2|p.R259C|1|0.25|ENSG00000198898|chr7:116917781-116917781|C/T|missense_variant;ENSG00000116489|ENST00000263168|CAPZA1;ENSG00000198898|ENST00000361183|CAPZA2;ENST00000426421.5_1_7:116544367-116557918:+|nuORF;ENST00000466066.1_1_1:113202257-113212751:+|nuORF;ENST00000565906.2_1_15:89532752-89533049:-|nuORF	80.45461616416974	0.09558281504443908	4				NaN	NaN	0	NaN	8761	3392	12148
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12170	32.102	NaN	12156	30	0	1616.9	0.214	+			23327	KYSLIKGNF	9	77	535.3047380628472	1068.5949231924942	2	535.3062133789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KYSLIKGNF_	ENSG00000143546|ENST00000368733|S100A8	85.86182877749512	0.07653218437724067	4				NaN	NaN	0	NaN	8773	3395	12169
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12171	32.106	NaN	12358	30	0	1452.1	0.106	+			51417	YTTLERGY	8	79	501.7476338566115	1001.480714780023	2	501.748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YTTLERGY_	ASTN2|p.L572M|1|0.37|ENSG00000148219|chr9:116976151-116976151|G/T|missense_variant;ENSG00000148219|ENST00000313400|ASTN2;nc|ENSG00000148219|O75129-2|ASTN2;nc|ENSG00000148219|O75129-3|ASTN2	55.50420428727701	0.5462892107279674	4				NaN	NaN	0	NaN	8774	3395	12169
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12172	32.108	NaN	5515	30	0	626.05	0.106	+			1139	AEMAQNAVRL	10	67	551.7866977464907	1101.5588425597814	2	551.7884521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEMAQNAVRL_	ENSG00000168036|ENST00000349496|CTNNB1	104.01359247289065	0.06577755598965461	4				NaN	NaN	0	NaN	8775	3395	12169
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12173	32.11	NaN	10018	30	0	3925.6	0.106	+			32367	QVAEIVSKY	9	85	518.7867314360856	1035.558909938971	2	518.7876586914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QVAEIVSKY_	ENSG00000138448|ENST00000261023|ITGAV;ITGAV|p.G401Efs*13|1|0.4|ENSG00000138448|chr2:186646721-186646721|A/-|frameshift_variant;ITGAV|p.G561Dfs*2|4|0.23|ENSG00000138448|chr2:186656358-186656358|G/-|frameshift_variant;ITGAV|p.V806Hfs*11|1|0.07|ENSG00000138448|chr2:186667758-186667759|-/CATTTTCAAAA|frameshift_variant;nc|ENSG00000138448|P06756-2|ITGAV;nc|ENSG00000138448|P06756-3|ITGAV	126.24258497203832	0.01742065577488747	4				NaN	NaN	0	NaN	8776	3395	12169
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12174	32.111	NaN	8408.9	30	0	1123.8	0.106			+	25710	LRNNAESI	8	83	458.74750320975124	915.4804534863025	2	458.7478942871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LRNNAESI_	REV__tr|U7T8N3|U7T8N3_FUSNUVirulence-associatedproteinE-likedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00110PE=4SV=1	50.0245360154114	0.5941082100236891	4				NaN	NaN	0	NaN	8777	3395	12169
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12175	32.113	NaN	6744.1	30	0	431.47	0.037				-1	 	0	78	589.8146997910396	1177.6148466488792	2	589.8162231445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8778	3395	12169
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12176	32.114	NaN	17193	30	0	3310.6	0.141	+			12975	GETKMVETAL	10	76	539.7757361917934	1077.5369194503867	2	539.77734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GETKMVETAL_	ENSG00000132465|ENST00000254801|JCHAIN	89.02883481214508	0.13663399911061233	4				NaN	NaN	0	NaN	8779	3395	12169
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12193	32.151	NaN	32944	30	0	5670.5	0.214	+			26439	LTGPVMPVR	9	83	485.27996333905025	968.5453737449005	2	485.28070068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LTGPVMPVR_	ENSG00000167526|ENST00000311528|RPL13;ENST00000399461.8_1_16:89627605-89629447:+|nuORF;ENST00000484610.5_1_16:89627907-89629447:+|nuORF;ENST00000570149.1_1_16:89628679-89629447:+|nuORF;nc|ENSG00000167526|P26373-2|RPL13	118.74307786436346	0.02196067127630568	4				NaN	NaN	0	NaN	8793	3398	12192
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12194	32.154	NaN	16869	30	0	1336.7	0.106	+			50640	YEDATKITV	9	88	520.2682223740161	1038.521891814832	2	520.2688598632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YEDATKITV_	ENSG00000132383|ENST00000254719|RPA1	123.20810148215591	0.019257656778428764	4				NaN	NaN	0	NaN	8794	3398	12192
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12195	32.156	NaN	9948.6	30	0	1226.2	0.106				-1	LPFPVRCPLY	10	80	631.342203659644	1260.669854386088	2	631.3428955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LPFPVRC(Carbamidomethyl (C))PLY_	ENST00000475214.5_1_3:135974226-136045892:+|nuORF	45.9519527083369	0.4943008177357963	4				NaN	NaN	0	NaN	8795	3398	12192
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12196	32.158	NaN	17761	30	0	2278.9	0.106	+			46434	VERVIQQL	8	86	492.79498577159154	983.5754186099831	2	492.79486083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VERVIQQL_	ENSG00000131459|ENST00000253778|GFPT2;ENSG00000198380|ENST00000357308|GFPT1;nc|ENSG00000198380|Q06210-2|GFPT1	69.6276240434122	0.4100012001731381	4				NaN	NaN	0	NaN	8796	3398	12192
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12197	32.16	NaN	8521.2	30	0	703.47	0.106			+	29948	PMSVRTPEL	9	84	515.2739592336197	1028.5333655340394	2	515.2743530273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PMSVRTPEL_	REV__ADGRL2|p.L775Pfs*5|1|0.25|ENSG00000117114|chr1:81966592-81966593|-/C|frameshift_variant;REV__ADGRL2|p.N1313Kfs*37|1|0.3|ENSG00000117114|chr1:81990701-81990702|-/A|frameshift_variant;REV__ADGRL2|p.R873Pfs*6|1|0.17|ENSG00000117114|chr1:81969276-81969277|-/T|frameshift_variant;REV__ENSG00000117114|ENST00000686636|ADGRL2;REV__nc|ENSG00000117114|O95490-2|ADGRL2;REV__nc|ENSG00000117114|O95490-3|ADGRL2;REV__nc|ENSG00000117114|O95490-4|ADGRL2;REV__nc|ENSG00000117114|O95490-5|ADGRL2;REV__nc|ENSG00000117114|O95490-6|ADGRL2;REV__nc|ENSG00000117114|O95490-7|ADGRL2;REV__nc|ENSG00000117114|O95490|ADGRL2	63.30626980617807	0.18605348971131092	4				NaN	NaN	0	NaN	8797	3398	12192
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12198	32.162	NaN	4285.3	30	0	547.73	0.037	+			10649	EYQIKTNQL	9	70	568.8001168193028	1135.5856807054056	2	568.8010864257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EYQIKTNQL_	ENSG00000148444|ENST00000376836|COMMD3;ENST00000463409.6_1_10:22605382-22615407:+|nuORF;ENST00000496071.5_1_10:22607528-22608924:+|nuORF;ENST00000602395.1_1_10:22607528-22615407:+|nuORF;ENST00000602574.5_1_10:22607528-22607842:+|nuORF	67.49366992349736	0.1516260258713357	4				NaN	NaN	0	NaN	8798	3398	12192
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12199	32.163	NaN	5942.9	30	0	914.14	0.141	+			28315	NEFQSQQNI	9	73	554.2563383921828	1106.4981238511655	2	554.257080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NEFQSQQNI_	ENSG00000075292|ENST00000264447|ZNF638;nc|ENSG00000075292|Q14966-2|ZNF638;nc|ENSG00000075292|Q14966-3|ZNF638;nc|ENSG00000075292|Q14966-4|ZNF638;nc|ENSG00000075292|Q14966-6|ZNF638;ZNF638|p.A1154Qfs*28|1|0.42|ENSG00000075292|chr2:71422969-71422969|A/-|frameshift_variant;ZNF638|p.E1606Lfs*12|1|0.06|ENSG00000075292|chr2:71426683-71426684|-/CCTGAGAA|frameshift_variant;ZNF638|p.G1305Rfs*2|2|0.26|ENSG00000075292|chr2:71423418-71423419|-/A|frameshift_variant;ZNF638|p.G1305Vfs*22|2|0.39|ENSG00000075292|chr2:71423419-71423419|A/-|frameshift_variant;ZNF638|p.K292Dfs*14|1|0.07|ENSG00000075292|chr2:71349827-71349828|CA/-|frameshift_variant;ZNF638|p.K640Tfs*45|1|0.04|ENSG00000075292|chr2:71365629-71365630|-/CTACATCTTCT|frameshift_variant	140.11223852658463	0.010427410095706195	4				NaN	NaN	0	NaN	8799	3398	12192
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12217	32.201	NaN	31304	30	0	2689.6	0.214	+			45624	TYQEVAQKF	9	99	557.2821431626472	1112.5497333920944	2	557.2830200195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TYQEVAQKF_	ENSG00000093072|ENST00000399837|ADA2;nc|ENSG00000093072|Q9NZK5-2|ADA2	122.93914200107957	0.019420478173996256	4				NaN	NaN	0	NaN	8814	3401	12216
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12218	32.205	NaN	27380	30	0	8753.1	0.106	+			13139	GGMSIFLKK	9	87	327.5241588937944	979.5506472815832	3	327.5247802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GGMSIFLKK_	ENST00000264995.7_1_3:131220431-131221595:-|nuORF	51.33545320467046	0.2872990594074956	4				NaN	NaN	0	NaN	8815	3401	12216
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12219	32.207	NaN	20215	30	0	6053.1	0.106	+			31351	QIYQSLIAFG	10	59	380.5412098282533	1138.60180008496	3	380.5413818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QIYQSLIAFG_	tr|U7T3K2|U7T3K2_FUSNUCelldivisionproteinFtsWOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00694PE=4SV=1	28.081489160057373	0.6505064946289502	4				NaN	NaN	0	NaN	8816	3401	12216
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12220	32.209	NaN	12781	30	0	1405.6	0.106	+			24123	LEKSMEPSL	9	90	517.2647683129064	1032.5149836926128	2	517.2655639648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LEKSMEPSL_	ENSG00000123338|ENST00000293373|NCKAP1L;ENST00000547500.1_1_12:54891564-54894436:+|nuORF;NCKAP1L|p.L134Sfs*11|1|0.04|ENSG00000123338|chr12:54508424-54508425|-/AGTGCTCAATATATTCCGAGTGAATCTAT|frameshift_variant	117.81106730687013	0.02252488733980868	4				NaN	NaN	0	NaN	8817	3401	12216
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12221	32.211	NaN	18128	30	0	6828.6	0.106	+			9433	EKKPRRTK	8	76	521.8264408086098	1041.6383286840196	2	522.3270874023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EKKPRRTK_	ENSG00000170385|ENST00000367001|SLC30A1	37.15910966729921	0.6739408393984688	4				NaN	NaN	0	NaN	8818	3401	12216
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12222	32.212	NaN	10977	30	0	958.61	0.033	+			10777	FAGPCKVI	8	74	446.24077019821857	890.4669874632372	2	446.2413024902344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_FAGPC(Carbamidomethyl (C))KVI_	ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC;PRKDC|p.D2437Wfs*3|1|0.11|ENSG00000253729|chr8:47840161-47840162|-/CA|frameshift_variant;PRKDC|p.E1557Sfs*16|1|0.16|ENSG00000253729|chr8:47886051-47886051|C/-|frameshift_variant;PRKDC|p.G1227Vfs*50|2|0.31|ENSG00000253729|chr8:47893306-47893306|C/-|frameshift_variant;PRKDC|p.K3681Nfs*6|1|0.32|ENSG00000253729|chr8:47785174-47785177|TTCT/-|frameshift_variant;PRKDC|p.M3670*|1|0.5|ENSG00000253729|chr8:47785212-47785212|T/-|frameshift_variant;PRKDC|p.M3846Cfs*12|1|0.13|ENSG00000253729|chr8:47779047-47779047|T/-|frameshift_variant;PRKDC|p.M4020Cfs*2|1|0.31|ENSG00000253729|chr8:47776968-47776968|T/-|frameshift_variant;PRKDC|p.N3605Kfs*3|1|0.22|ENSG00000253729|chr8:47788993-47788994|-/T|frameshift_variant;PRKDC|p.N4037Ifs*15|1|0.17|ENSG00000253729|chr8:47776916-47776916|T/-|frameshift_variant;PRKDC|p.R2704Gfs*13|2|0.34|ENSG00000253729|chr8:47834238-47834238|T/-|frameshift_variant;PRKDC|p.S3402Ifs*16|1|0.04|ENSG00000253729|chr8:47799302-47799303|-/AAACCGTGAGTTAGAGGAGGTAA|frameshift_variant;PRKDC|p.S4099Qfs*6|1|0.25|ENSG00000253729|chr8:47774265-47774265|A/-|frameshift_variant;PRKDC|p.T3268Pfs*7|1|0.5|ENSG00000253729|chr8:47803426-47803426|T/-|frameshift_variant;PRKDC|p.W3401Cfs*4|1|0.01|ENSG00000253729|chr8:47799304-47799305|-/AATGAATA|frameshift_variant	71.37791200682192	0.3954169775488141	4				NaN	NaN	0	NaN	8819	3401	12216
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12223	32.213	NaN	12057	30	0	3783.7	0.142	+			8747	EEFQFIKKA	9	79	570.3078994234518	1138.6012459137035	2	570.308837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EEFQFIKKA_	ENSG00000140259|ENST00000267812|MFAP1	159.27591364854348	0.004707062175358555	4				NaN	NaN	0	NaN	8820	3401	12216
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12241	32.252	NaN	56273	30	0	17551	0.214	+			15148	GTSELLLAK	9	83	466.2765496926788	930.5385464521577	2	466.27642822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTSELLLAK_	ASAP1|p.P792Lfs*20|1|0.1|ENSG00000153317|chr8:130112120-130112120|G/-|frameshift_variant;ASAP2|p.H548Qfs*57|1|0.14|ENSG00000151693|chr2:9374842-9374842|C/-|frameshift_variant;ASAP2|p.L787Afs*16|1|0.31|ENSG00000151693|chr2:9388513-9388514|-/C|frameshift_variant;ENSG00000151693|ENST00000281419|ASAP2;ENSG00000153317|ENST00000518721|ASAP1;nc|ENSG00000151693|O43150-2|ASAP2;nc|ENSG00000153317|Q9ULH1-2|ASAP1	104.0567914643314	0.03506238181059741	4				NaN	NaN	0	NaN	8835	3404	12240
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12242	32.256	NaN	15333	30	0	3064	0.106				-1	 	0	68	448.7450134528789	895.4754739725578	2	448.7452697753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8836	3404	12240
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12243	32.258	NaN	12598	30	0	2571.5	0.106	+			16662	HIIAGAGEL	9	74	440.7475485595251	879.4805441858502	2	440.7478332519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HIIAGAGEL_	ENSG00000167658|ENST00000309311|EEF2	79.9392285194092	0.09781135437301468	4				NaN	NaN	0	NaN	8837	3404	12240
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12244	32.26	NaN	10969	30	0	1638.9	0.106	+			41493	SVPEAQSAL	9	68	451.2345923519274	900.4546317706548	2	451.23486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVPEAQSAL_	ENSG00000086666|ENST00000261749|ZFAND6;ENST00000561017.1_1_15:80414070-80415156:+|nuORF;nc|ENSG00000086666|Q6FIF0-2|ZFAND6	104.0567914643314	0.03506238181059741	4				NaN	NaN	0	NaN	8838	3404	12240
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12245	32.262	NaN	9889.7	30	0	1738.9	0.106	+			49995	WANVGKSL	8	86	437.74261215638717	873.4706713795744	2	437.74261474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_WANVGKSL_	ENSG00000109452|ENST00000262992|INPP4B;ENST00000512630.5_1_4:143007384-143094853:-|nuORF	52.936696900407355	0.5717071646657654	4				NaN	NaN	0	NaN	8839	3404	12240
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12246	32.263	NaN	8248.7	30	0	536.59	0.035	+			3779	ATAEVLNIGK	10	76	508.29306654370737	1014.5715801542148	2	508.2928161621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATAEVLNIGK_	ENSG00000128050|ENST00000512576|PAICS;ENST00000510584.1_1_4:57302478-57308067:+|nuORF;nc|ENSG00000128050|P22234-2|PAICS	77.53327743719008	0.21577387331637743	4				NaN	NaN	0	NaN	8840	3404	12240
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12247	32.264	NaN	5612.9	30	0	394.79	0.139			+	47024	VLAYNAIAQ	9	66	481.7679907197621	961.5214285063242	2	482.2665100097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VLAYNAIAQ_	REV__ENSG00000148357|ENST00000683500|HMCN2;REV__HMCN2|p.P4784Qfs*22|1|0.32|ENSG00000148357|chr9:130430363-130430363|C/-|frameshift_variant;REV__nc|ENSG00000148357|Q8NDA2-1|HMCN2;REV__nc|ENSG00000148357|Q8NDA2-4|HMCN2	40.5726180659479	0.4135428067754104	4				NaN	NaN	0	NaN	8841	3404	12240
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12263	32.299	NaN	11095	30	0	1397	0.214	+			17602	IEFSDKESV	9	74	527.2580841863409	1052.5016154394816	2	527.2591552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IEFSDKESV_	ENSG00000100836|ENST00000216727|PABPN1;ENSG00000258643|ENST00000678502|BCL2L2-PABPN1;ENST00000391782.2_1_X:70640109-70640352:-|nuORF;nc|ENSG00000100836|Q86U42-2|PABPN1;nc|ENSG00000258643|Q92843-2|BCL2L2	59.93077597824379	0.21419174904018318	4				NaN	NaN	0	NaN	8854	3407	12262
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12264	32.303	NaN	7054.9	30	0	4122.2	0.106	+			23499	LAGLAVHQI	9	59	461.2796896896536	920.5448264461072	2	461.27960205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LAGLAVHQI_	ENST00000425327.6_2_3:118619838-118620162:-|nuORF	40.5726180659479	0.4135428067754104	4				NaN	NaN	0	NaN	8855	3407	12262
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12265	32.305	NaN	10826	30	0	2471.6	0.106			+	27757	MQYAHLAQLS	10	75	581.2913280766995	NaN	0	581.2913818359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MQYAHLAQLS_	REV__ENST00000433118.5_1_2:130917171-130932539:-|nuORF	66.42927471994793	0.1817757526326617	4				NaN	NaN	0	NaN	8856	3407	12262
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12266	32.306	NaN	8777.8	30	0	1228.4	0.106	+			27422	MLAKRPLIT	9	73	521.8264408086098	1041.6383286840196	2	521.82958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MLAKRPLIT_	sp|F5HCM1|VIE1_HCMVMImmediateearlyproteinIE1OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL123PE=3SV=1;sp|P13202|VIE1_HCMVAImmediateearlyproteinIE1OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL123PE=1SV=1	51.19269402634007	0.2889735674168909	4				NaN	NaN	0	NaN	8857	3407	12262
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12267	32.308	NaN	7853.1	30	0	493.91	0.106	+			35945	SEGNLVVREV	10	72	551.2973117393536	1100.5800705455072	2	551.2989501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SEGNLVVREV_	ENSG00000127831|ENST00000248444|VIL1;nc|ENSG00000127831|P09327-2|VIL1	159.33581866081465	0.006837894036646432	4				NaN	NaN	0	NaN	8858	3407	12262
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12268	32.31	NaN	3024.5	30	0	355.03	0.033	+			22206	KSTQKPGL	8	53	429.75531341488244	857.4960738965649	2	429.75579833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KSTQKPGL_	ENST00000449260.6_1_12:56355419-56359775:-|nuORF	49.44154591367651	0.597725784090933	4				NaN	NaN	0	NaN	8859	3407	12262
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12269	32.311	NaN	4406.7	30	0	1072.3	0.141	+			10418	EVHNKVGSTN	10	71	542.7711821496652	1083.5278113661302	2	542.7703857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EVHNKVGSTN_	ENSG00000183853|ENST00000359209|KIRREL1;nc|ENSG00000183853|Q96J84-2|KIRREL1;nc|ENSG00000183853|Q96J84-3|KIRREL1	41.42661286455405	0.5359995577334734	4				NaN	NaN	0	NaN	8860	3407	12262
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12280	32.336	NaN	50631	30	0	11017	0.214	+			6142	AVQEFGLAR	9	85	495.7716876073053	989.5288222814106	2	495.77166748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVQEFGLAR_	ENSG00000169230|ENST00000303204|PRELID1;nc|ENSG00000169230|Q9Y255-2|PRELID1	163.1509380574825	0.003936019289634439	4				NaN	NaN	0	NaN	8868	3410	12279
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12281	32.34	NaN	14664	30	0	4567.9	0.106			+	-1	VPCTKALQCF	10	74	389.52778378157484	1165.5615219449246	3	389.5279846191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_VPCTKALQC(Carbamidomethyl (C))F_	REV__ENSG00000141510|ENST00000269305|TP53;REV__ENST00000505014.5_1_17:7578140-7579834:-|nuORF;REV__nc|ENSG00000141510|P04637-2|TP53;REV__nc|ENSG00000141510|P04637-3|TP53;REV__nc|ENSG00000141510|P04637-4|TP53;REV__nc|ENSG00000141510|P04637-5|TP53;REV__nc|ENSG00000141510|P04637-6|TP53;REV__nc|ENSG00000141510|P04637-7|TP53;REV__nc|ENSG00000141510|P04637-8|TP53;REV__nc|ENSG00000141510|P04637-9|TP53;REV__TP53|p.C229Yfs*10|1|0.59|ENSG00000141510|chr17:7674276-7674277|AC/-|frameshift_variant;REV__TP53|p.C242Afs*5|1|0.54|ENSG00000141510|chr17:7674240-7674240|G/-|frameshift_variant;REV__TP53|p.E198Gfs*11|1|0.43|ENSG00000141510|chr17:7674938-7674939|-/C|frameshift_variant;REV__TP53|p.E336Sfs*9|1|0.15|ENSG00000141510|chr17:7670704-7670704|A/-|frameshift_variant;REV__TP53|p.G302Rfs*4|1|0.13|ENSG00000141510|chr17:7673717-7673718|-/G|frameshift_variant;REV__TP53|p.H178Tfs*69|1|0.68|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant;REV__TP53|p.I195Nfs*14|1|0.81|ENSG00000141510|chr17:7674947-7674948|-/T|frameshift_variant;REV__TP53|p.M133R|1|0.71|ENSG00000141510|chr17:7675214-7675214|A/C|missense_variant;REV__TP53|p.P151Rfs*27|1|0.46|ENSG00000141510|chr17:7675153-7675160|GGGCGGGG/-|frameshift_variant;REV__TP53|p.P153Afs*28|1|0.62|ENSG00000141510|chr17:7675156-7675157|-/G|frameshift_variant;REV__TP53|p.P301Qfs*44|1|0.5|ENSG00000141510|chr17:7673718-7673718|G/-|frameshift_variant;REV__TP53|p.P322Hfs*23|1|0.53|ENSG00000141510|chr17:7673563-7673563|G/-|frameshift_variant;REV__TP53|p.Q144_L145dup|1|0.56|ENSG00000141510|chr17:7675176-7675177|-/CAGCTG|inframe_insertion;REV__TP53|p.Q331Sfs*6|1|0.66|ENSG00000141510|chr17:7673537-7673538|-/A|frameshift_variant;REV__TP53|p.R280Kfs*59|1|0.41|ENSG00000141510|chr17:7673763-7673781|TCCTCTGTGCGCCGGTCTC/-|frameshift_variant;REV__TP53|p.R290Kfs*53|1|0.62|ENSG00000141510|chr17:7673747-7673753|CTTGCGG/-|frameshift_variant;REV__TP53|p.R335Lfs*10|1|0.74|ENSG00000141510|chr17:7670705-7670705|C/-|frameshift_variant	39.252832667884924	0.5560298534376815	4				NaN	NaN	0	NaN	8869	3410	12279
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12282	32.342	NaN	11916	30	0	1739.2	0.106			+	11361	FLHCQVKEY	9	77	583.7878328863351	1165.56111283947	2	583.7885131835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FLHCQVKEY_	REV__ENST00000511316.1_1_4:174253953-174254163:-|nuORF	51.33545320467046	0.2872990594074956	4				NaN	NaN	0	NaN	8870	3410	12279
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12283	32.344	NaN	11497	30	0	5336.7	0.106	+			22763	KVEYKLGFQ	9	73	556.3105104097432	1110.6064678862863	2	556.3112182617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KVEYKLGFQ_	ENSG00000163785|ENST00000623711|RYK;nc|ENSG00000163785|P34925-2|RYK;RYK|p.N182Ifs*5|1|0.28|ENSG00000163785|chr3:134209739-134209739|T/-|frameshift_variant	53.08895987439943	0.27122541748218487	4				NaN	NaN	0	NaN	8871	3410	12279
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12284	32.345	NaN	8095.5	30	0	883.68	0.106	+			28422	NETVAIHSL	9	87	492.2606929179229	982.5068329026458	2	492.26080322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NETVAIHSL_	ENSG00000082269|ENST00000418814|FAM135A;FAM135A|p.N1165Ifs*3|1|0.07|ENSG00000082269|chr6:70526577-70526578|-/T|frameshift_variant;FAM135A|p.N999Ifs*5|1|0.39|ENSG00000082269|chr6:70526073-70526073|A/-|frameshift_variant;FAM135A|p.N999Kfs*2|1|0.18|ENSG00000082269|chr6:70526072-70526073|-/A|frameshift_variant;nc|ENSG00000082269|Q9P2D6-2|FAM135A;nc|ENSG00000082269|Q9P2D6-3|FAM135A;nc|ENSG00000082269|Q9P2D6-4|FAM135A	124.08010499294276	0.018729767491916592	4				NaN	NaN	0	NaN	8872	3410	12279
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12285	32.347	NaN	6994.1	30	0	669.54	0.106	+			16313	HEIEALKSF	9	83	537.2839190380636	1072.553285142927	2	537.2850341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HEIEALKSF_	ENSG00000078618|ENST00000352171|NRDC;nc|ENSG00000078618|O43847-2|NRDC	138.06239232086	0.011389075116295402	4				NaN	NaN	0	NaN	8873	3410	12279
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12286	32.349	NaN	5280.9	30	0	2411	0.038	+			35573	SAYFAEKLYK	10	55	407.2161895135206	1218.6267391407619	3	407.216552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SAYFAEKLYK_	ENSG00000196975|ENST00000394295|ANXA4;ENST00000471395.1_1_2:70045687-70052644:+|nuORF;ENST00000477632.5_1_2:70037634-70052644:+|nuORF;nc|ENSG00000196975|P09525-2|ANXA4;nc|ENSG00000196975|P09525|ANXA4	36.31764250033197	0.5830761606467809	4				NaN	NaN	0	NaN	8874	3410	12279
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12300	32.379	NaN	10941	30	0	1035.6	0.214	+			20119	KEKLCYVAL	9	78	562.3118207405576	1122.609088547915	2	562.3135986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_KEKLC(Carbamidomethyl (C))YVAL_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196604|ENST00000409914|POTEF;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000418987.2_1_9:103493819-103494230:+|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;nc|ENSG00000204434|Q9BYX7|POTEKP	85.16082228582465	0.07850854922700509	4				NaN	NaN	0	NaN	8885	3413	12299
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12301	32.382	NaN	7748.7	30	0	611.75	0.106	+			10592	EYKNTNEMF	9	83	588.2547205820078	1174.4948882308156	2	588.2562255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EYKNTNEMF_	ENSG00000065243|ENST00000370521|PKN2;nc|ENSG00000065243|Q16513-2|PKN2;nc|ENSG00000065243|Q16513-3|PKN2;nc|ENSG00000065243|Q16513-4|PKN2;nc|ENSG00000065243|Q16513-5|PKN2	127.46168284122857	0.016682644177004526	4				NaN	NaN	0	NaN	8886	3413	12299
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12302	32.384	NaN	11980	30	0	660.03	0.106	+			29695	PGWVHPRGV	9	73	502.7744696933948	NaN	0	502.7735595703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PGWVHPRGV_	ENSG00000149541|ENST00000265471|B3GAT3;ENST00000532585.5_1_11:62383175-62388587:-|nuORF;nc|ENSG00000149541|O94766-2|B3GAT3	42.47446043378293	0.25855550551448697	4				NaN	NaN	0	NaN	8887	3413	12299
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12303	32.386	NaN	8925.7	30	0	1204.5	0.106			+	19819	KEDLFIRDG	9	83	546.7869746225623	1091.5593963119245	2	546.7885131835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEDLFIRDG_	REV__tr|U7SJ90|U7SJ90_FUSNUtRNA(Ile)-lysidinesynthaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=tilSPE=3SV=1	68.84614121027924	0.14577793175421136	4				NaN	NaN	0	NaN	8888	3413	12299
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12304	32.388	NaN	9077	30	0	1042.2	0.106	+			29274	NYGPMKGGSF	10	84	529.2419603669728	1056.4693678007454	2	529.2428588867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NYGPMKGGSF_	ENSG00000170144|ENST00000392524|HNRNPA3;ENST00000451198.2_1_20:35249346-35249823:+|nuORF;ENST00000472163.1_1_3:75263799-75264780:+|nuORF;nc|ENSG00000170144|P51991-2|HNRNPA3	87.69643885390035	0.14426223466775756	4				NaN	NaN	0	NaN	8889	3413	12299
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12305	32.39	NaN	10346	30	0	1599.8	0.106			+	50110	WGSPCPPIQI	10	79	549.2749566350236	1096.5353603368471	2	549.2748413085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_WGSPCPPIQI_	REV__ENSG00000187498|ENST00000375820|COL4A1	54.776311868738084	0.41334902933431344	4				NaN	NaN	0	NaN	8890	3413	12299
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12306	32.392	NaN	5216.1	30	0	526.77	0.034	+			23581	LALRSMRP	8	58	472.27890133880646	942.543249744413	2	472.2799072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LALRSMRP_	ENST00000288235.8_1_15:59664913-59665042:-|nuORF	57.81127852772723	0.5234495074909924	4				NaN	NaN	0	NaN	8891	3413	12299
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12323	32.425	NaN	26243	30	0	6922.4	0.214	+			3962	ATATLIIEH	9	78	484.773861819597	NaN	0	484.7738952636719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATATLIIEH_	ENSG00000100522|ENST00000216410|GNPNAT1;ENST00000553987.1_1_14:53248483-53250189:-|nuORF	224.4268277125307	2.0555513867849767E-10	4				NaN	NaN	0	NaN	8905	3416	12322
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12324	32.429	NaN	18140	30	0	4116.8	0.106			+	27992	MVTGIRAWP	9	84	515.7790151426173	1029.5434773520344	2	515.7799072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MVTGIRAWP_	REV__ENST00000442832.8_1_19:58341801-58341915:+|nuORF	58.78195531508484	0.22376836668196862	4				NaN	NaN	0	NaN	8906	3416	12322
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12325	32.431	NaN	39747	30	0	10998	0.106	+			14191	GSSAINILK	9	91	451.7690885155746	901.5236240979492	2	451.7684326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GSSAINILK_	ENSG00000167522|ENST00000301030|ANKRD11;ENST00000330736.9_1_16:89334888-89371640:-|nuORF	95.81516180277367	0.04847050768394289	4				NaN	NaN	0	NaN	8907	3416	12322
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12326	32.433	NaN	22334	30	0	6079.3	0.106	+			51581	YYLGKKNY	8	97	524.7762060139813	1047.5378590947626	2	524.7752075195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YYLGKKNY_	tr|U7T2G3|U7T2G3_FUSNUMultidrugexportproteinMepAOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00556PE=3SV=1	55.50420428727701	0.5462892107279674	4				NaN	NaN	0	NaN	8908	3416	12322
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12327	32.434	NaN	24703	30	0	5076.1	0.106	+			30451	PYTKVEESF	9	92	550.2686677265007	1098.5227825198012	2	550.2701416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PYTKVEESF_	ENSG00000182858|ENST00000330817|ALG12	163.1509380574825	0.003936019289634439	4				NaN	NaN	0	NaN	8909	3416	12322
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12328	32.436	NaN	8259.3	30	0	1285.5	0.034			+	23682	LASRVLVPG	9	67	456.28657928213926	910.5586056310785	2	456.28692626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LASRVLVPG_	REV__ENST00000566749.5_1_16:30094185-30096380:+|nuORF	66.42927471994793	0.16001998865088202	4				NaN	NaN	0	NaN	8910	3416	12322
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12329	32.437	NaN	9255.5	30	0	1157.7	0.141				-1	 	0	70	543.8183080062129	1085.6220630792257	2	543.8192138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8911	3416	12322
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12344	32.47	NaN	29575	30	0	4781	0.214				-1	 	0	87	457.7864881088575	913.558423284515	2	457.7868347167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8923	3419	12343
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12345	32.473	NaN	25410	30	0	4357.7	0.106				-1	 	0	87	541.3247062077347	1080.6348594822693	2	541.3258666992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8924	3419	12343
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12346	32.475	NaN	15115	30	0	1044.8	0.106	+			49677	VYKCLSENI	9	85	563.2832161821121	1124.5518794310242	2	563.2843627929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_VYKC(Carbamidomethyl (C))LSENI_	ENSG00000082898|ENST00000401558|XPO1;ENST00000428210.5_1_2:61705957-61719950:-|nuORF;ENST00000461407.5_1_2:61712881-61715780:-|nuORF	136.26810882979174	0.012230845423532208	4				NaN	NaN	0	NaN	8925	3419	12343
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12347	32.477	NaN	27370	30	0	4800.6	0.106				-1	 	0	73	470.7943000282794	939.5740471233588	2	470.7945251464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8926	3419	12343
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12348	32.479	NaN	20104	30	0	2737.8	0.106	+			46232	VEAVEQNTL	9	82	501.75828499727913	1001.5020170613583	2	501.7585754394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VEAVEQNTL_	ENSG00000142669|ENST00000270792|SH3BGRL3;ENST00000319041.6_1_1:26607416-26607611:+|nuORF	106.68306549817024	0.032382560583716295	4				NaN	NaN	0	NaN	8927	3419	12343
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12349	32.48	NaN	6776.3	30	0	1621.4	0.106				-1	 	0	68	478.2711211693284	954.5276894054568	2	478.2713928222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8928	3419	12343
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12350	32.482	NaN	12395	30	0	1555.5	0.034	+			2561	AQATISFPK	9	85	481.7679907197621	961.5214285063242	2	481.76873779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AQATISFPK_	CDC6|p.P86Lfs*17|1|0.14|ENSG00000094804|chr17:40291132-40291132|C/-|frameshift_variant;ENSG00000094804|ENST00000209728|CDC6	85.16082228582465	0.07850854922700509	4				NaN	NaN	0	NaN	8929	3419	12343
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12360	32.504	NaN	26906	30	0	4300.5	0.214	+			17747	IEQEQKLAL	9	81	536.3053825439578	1070.5962121547154	2	536.30615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IEQEQKLAL_	ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2	114.8945686534367	0.024290463251177924	4				NaN	NaN	0	NaN	8936	3422	12359
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12361	32.508	NaN	11541	30	0	3347.7	0.106	+			45038	TVGEVFYTK	9	78	522.2732657798875	1042.531978626575	2	522.2739868164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVGEVFYTK_	ENSG00000204385|ENST00000229729|SLC44A4;nc|ENSG00000204385|Q53GD3-3|SLC44A4;SLC44A4|p.F618Sfs*25|1|0.43|ENSG00000204385|chr6:31864889-31864889|A/-|frameshift_variant;SLC44A4|p.G398Afs*7|1|0.29|ENSG00000204385|chr6:31869197-31869197|G/-|frameshift_variant;SLC44A4|p.N144Kfs*55|2|0.31|ENSG00000204385|chr6:31874757-31874758|-/T|frameshift_variant;SLC44A4|p.S619Lfs*9|1|0.31|ENSG00000204385|chr6:31864888-31864889|-/A|frameshift_variant	76.16968421966216	0.11411088698345859	4				NaN	NaN	0	NaN	8937	3422	12359
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12362	32.51	NaN	13038	30	0	1249	0.106	+			43190	TETVLRQAI	9	80	515.7978604792959	1029.5811680253917	2	515.7985229492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TETVLRQAI_	EEF2|p.E241Rfs*13|1|0.26|ENSG00000167658|chr19:3982316-3982316|C/-|frameshift_variant;ENSG00000167658|ENST00000309311|EEF2	51.19269402634007	0.2889735674168909	4				NaN	NaN	0	NaN	8938	3422	12359
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12363	32.512	NaN	8414.1	30	0	1998.7	0.106				-1	 	0	68	462.7968572532101	923.5791615732202	2	462.79705810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8939	3422	12359
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12364	32.513	NaN	4247.9	30	0	938.54	0.106				-1	 	0	52	336.53376358563514	1006.5794613571054	3	336.5343017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8940	3422	12359
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12365	32.515	NaN	6491.2	30	0	678.85	0.036	+			40896	SVFMSQNLK	9	73	527.2732783600605	1052.532003786921	2	527.2732543945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVFMSQNLK_	ENST00000586255.5_1_19:9448675-9449241:+|nuORF	77.53327743719008	0.1082147015697554	4				NaN	NaN	0	NaN	8941	3422	12359
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12366	32.516	NaN	3880.8	30	0	941.81	0.139				-1	 	0	50	350.2062499793319	698.3979470254638	2	350.2066345214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8942	3422	12359
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12374	32.536	NaN	13658	30	0	2721.2	0.214	+			5445	ATYSEDGLLK	10	74	548.7803602700458	NaN	0	548.7800903320312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATYSEDGLLK_	ENSG00000122692|ENST00000397149|SMU1;nc|ENSG00000122692|Q2TAY7-2|SMU1	72.87924865735499	0.13450315462291293	4				NaN	NaN	0	NaN	8947	3425	12373
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12375	32.539	NaN	8426.3	30	0	1003.4	0.106	+			12805	GEMKGAIGL	9	67	438.23511680664603	874.4556806800921	2	438.2361145019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEMKGAIGL_	ENSG00000005020|ENST00000345317|SKAP2	98.62937762414208	0.04060045538121712	4				NaN	NaN	0	NaN	8948	3425	12373
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12376	32.541	NaN	7983.2	30	0	1737.4	0.106			+	38272	SQPASIQPVV	10	72	513.2845950803231	1024.5546372274462	2	513.284912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SQPASIQPVV_	REV__ENSG00000102900|ENST00000308159|NUP93;REV__nc|ENSG00000102900|Q8N1F7-2|NUP93;REV__NUP93|p.F699Lfs*19|1|0.34|ENSG00000102900|chr16:56839025-56839025|T/-|frameshift_variant	56.72105179125745	0.3956618550748046	4				NaN	NaN	0	NaN	8949	3425	12373
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12377	32.543	NaN	8129.4	30	0	1125	0.106				-1	LQWQACSAL	9	77	538.7652154179826	NaN	0	538.7652587890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_LQWQAC(Carbamidomethyl (C))SAL_	ENST00000302351.8_1_5:73936381-73936522:-|nuORF	47.657333605630114	0.2228375344433429	4				NaN	NaN	0	NaN	8950	3425	12373
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12378	32.545	NaN	12100	30	0	1301.2	0.106	+			27781	MRQTVAVDV	9	83	509.7697831841821	1017.5250134351642	2	509.7710266113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MRQTVAVDV_	ENST00000359165.5_1_12:19609181-19609565:-|nuORF	51.52775601994872	0.28504342437107444	4				NaN	NaN	0	NaN	8951	3425	12373
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12379	32.547	NaN	9054.9	30	0	3069.3	0.106				-1	 	0	77	517.2733730659087	516.2660965993086	1	517.2750244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8952	3425	12373
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12380	32.548	NaN	8537.6	30	0	924.82	0.037	+			18365	IQPINHTTLQ	10	79	582.8215326004416	1163.6285122676832	2	582.8228149414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IQPINHTTLQ_	ENSG00000145780|ENST00000274457|FEM1C	49.536043120802724	0.461275219792494	4				NaN	NaN	0	NaN	8953	3425	12373
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12393	32.576	NaN	12291	30	0	1302.9	0.214	+			26473	LTLAVQAVSI	10	79	507.81283055010107	1013.6111081670022	2	507.813232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LTLAVQAVSI_	ENSG00000136861|ENST00000349780|CDK5RAP2;ENST00000483412.5_1_9:123169248-123169542:-|nuORF;nc|ENSG00000136861|Q96SN8-2|CDK5RAP2;nc|ENSG00000136861|Q96SN8-3|CDK5RAP2	104.0567914643314	0.06564926686336217	4				NaN	NaN	0	NaN	8963	3428	12392
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12394	32.579	NaN	9112	30	0	622	0.106	+			11670	FQRAITGASL	10	83	532.2974147826078	1062.5802766320155	2	532.29931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FQRAITGASL_	ENSG00000114391|ENST00000394077|RPL24;ENST00000446071.1_1_9:72832122-72832404:+|nuORF	78.26377905018397	0.20980573808910843	4				NaN	NaN	0	NaN	8964	3428	12392
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12395	32.581	NaN	5845.2	30	0	582.27	0.106			+	41255	SVLGVKSIE	9	68	466.2765496926788	930.5385464521577	2	466.2817687988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVLGVKSIE_	REV__ENSG00000104888|ENST00000221485|SLC17A7;REV__nc|ENSG00000104888|Q9P2U7-2|SLC17A7;REV__nc|ENSG00000104888|Q9P2U7-3|SLC17A7;REV__SLC17A7|p.I357Nfs*105|1|0.22|ENSG00000104888|chr19:49432599-49432600|-/T|frameshift_variant	79.71258880314673	0.09879134589249085	4				NaN	NaN	0	NaN	8965	3428	12392
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12396	32.583	NaN	8145.2	30	0	1987.2	0.106				-1	 	0	50	331.86559289221657	992.5749492768498	3	331.86614990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8966	3428	12392
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12397	32.585	NaN	7131.9	30	0	2824.7	0.106			+	-1	EMLHKLIRS	9	60	381.55000780987467	1141.628194029824	3	381.550048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_EM(Oxidation (M))LHKLIRS_	REV__ENST00000479967.5_1_3:127434467-127541990:-|nuORF	30.317721548370564	0.5199124245378496	4				NaN	NaN	0	NaN	8967	3428	12392
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12398	32.587	NaN	5141.6	30	0	784.14	0.037			+	8165	EAALASAL	8	62	373.2096998251392	NaN	0	373.209716796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EAALASAL_	REV__ENST00000254616.10_1_11:6503555-6503747:+|nuORF	35.200714571348534	1.7418937515398478	4				NaN	NaN	0	NaN	8968	3428	12392
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12399	32.587	NaN	23282	30	0	11979	0.141			+	-1	SMSLLEVSVT	10	78	361.18652179216093	1080.5377359766828	3	361.187255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_SM(Oxidation (M))SLLEVSVT_	REV__ENSG00000136273|ENST00000258774|HUS1;REV__nc|ENSG00000136273|O60921-2|HUS1	26.063383197487333	0.6669871633831898	4				NaN	NaN	0	NaN	8969	3428	12392
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12414	32.621	NaN	37160	30	0	3989	0.216	+			35310	SAMKAVTEL	9	84	475.25402500935303	948.4934970855061	2	475.2545166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAMKAVTEL_	ENSG00000128245|ENST00000248975|YWHAH	104.01359247289065	0.03510646158778409	4				NaN	NaN	0	NaN	8981	3431	12413
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12415	32.624	NaN	23309	30	0	3597.6	0.106			+	10126	ESNRIDLSL	9	92	523.7765008143704	1045.5384486955406	2	523.7776489257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ESNRIDLSL_	REV__ENSG00000147724|ENST00000395297|FAM135B;REV__ENST00000482951.6_1_8:139144838-139379577:-|nuORF;REV__FAM135B|p.A704Cfs*7|1|0.18|ENSG00000147724|chr8:138152365-138152366|-/A|frameshift_variant;REV__nc|ENSG00000147724|Q49AJ0-2|FAM135B;REV__nc|ENSG00000147724|Q49AJ0-3|FAM135B;REV__nc|ENSG00000147724|Q49AJ0-4|FAM135B	72.87924865735499	0.12833875048249987	4				NaN	NaN	0	NaN	8982	3431	12413
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12416	32.626	NaN	23820	30	0	1970.9	0.106	+			11777	FSLSNARMGV	10	97	541.276156490194	1080.537760047188	2	541.2769775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FSLSNARMGV_	nc|ENSG00000211951|A0A0B4J1V2|IGHV2-26	74.25504064058377	0.24255678544297835	4				NaN	NaN	0	NaN	8983	3431	12413
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12417	32.628	NaN	15682	30	0	1587.9	0.106				-1	 	0	79	507.7310208380199	1013.4474887428398	2	507.7314758300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8984	3431	12413
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12418	32.63	NaN	22056	30	0	3046.2	0.106				-1	 	0	74	527.7506324924864	1053.4867120517727	2	527.7512817382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8985	3431	12413
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12419	32.632	NaN	11664	30	0	1993.1	0.035			+	10199	ETEIIIER	8	79	501.7756874797965	1001.536822026393	2	501.7767333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ETEIIIER_	REV__SLC8A3|p.G272E|1|0.3|ENSG00000100678|chr14:70167608-70167608|C/T|missense_variant	68.78682469695295	0.41700713582915416	4				NaN	NaN	0	NaN	8986	3431	12413
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12420	32.632	NaN	11401	30	0	1705.4	0.138			+	-1	ATRGPAKM	8	74	424.22617734346613	846.4378017537323	2	424.2265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_ATRGPAKM(Oxidation (M))_	REV__ENST00000321276.7_1_2:223289259-223339308:+|nuORF	38.80614096846853	0.6637206697844082	4				NaN	NaN	0	NaN	8987	3431	12413
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12432	32.659	NaN	25322	30	0	3678.4	0.214	+			187	AALDKATVL	9	84	451.27045760067864	NaN	0	451.2709655761719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AALDKATVL_	ENSG00000150593|ENST00000280154|PDCD4;ENST00000489049.5_1_10:112647518-112650449:+|nuORF;nc|ENSG00000150593|Q53EL6-2|PDCD4	90.60085204095205	0.040385177724871185	4				NaN	NaN	0	NaN	8996	3434	12431
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12433	32.663	NaN	56271	30	0	24365	0.106				-1	 	0	84	401.91977286620664	1202.73748919882	3	401.9200744628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8997	3434	12431
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12434	32.665	NaN	55524	30	0	9803.9	0.106	+			47782	VSHVCSPSF	9	95	510.2337984480275	1018.4530439628551	2	510.2343444824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_VSHVC(Carbamidomethyl (C))SPSF_	AluJr_dup79343|chr19:41725353-41725661:-|1.3460544452102|0.0536068752531314|4.65|480.0|2|1|sense	90.77665401227738	0.06267569666681755	4				NaN	NaN	0	NaN	8998	3434	12431
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12435	32.667	NaN	21434	30	0	2913.3	0.106	+			41264	SVLIQKQIFK	10	97	602.3764343122807	1202.7383156913613	2	602.3766479492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVLIQKQIFK_	ENSG00000205339|ENST00000379719|IPO7;ENST00000528833.1_1_11:9431619-9435997:+|nuORF;IPO7|p.D430Mfs*6|1|0.18|ENSG00000205339|chr11:9425208-9425208|A/-|frameshift_variant;IPO7|p.M511Cfs*3|1|0.19|ENSG00000205339|chr11:9429134-9429134|A/-|frameshift_variant	105.16503226865211	0.06235809640390954	4				NaN	NaN	0	NaN	8999	3434	12431
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12436	32.669	NaN	12419	30	0	1634.7	0.106				-1	 	0	76	437.27333798758957	436.2660615209896	1	437.2736511230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9000	3434	12431
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12437	32.67	NaN	6730.3	30	0	836.82	0.035	+			36378	SETGHVYTF	9	77	520.737718151835	1039.46088337047	2	520.7379760742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SETGHVYTF_	ENSG00000112658|ENST00000265354|SRF	58.78195531508484	0.22376836668196862	4				NaN	NaN	0	NaN	9001	3434	12431
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12438	32.671	NaN	10858	30	0	4373.4	0.139	+			13978	GSATSLVFK	9	68	455.2552353883915	908.495917843583	2	455.25543212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GSATSLVFK_	ENSG00000227345|ENST00000616448|PARG;PARG|p.D904Tfs*4|1|0.16|ENSG00000227345|chr10:49820231-49820231|C/-|frameshift_variant;PARG|p.N277Mfs*5|3|0.4|ENSG00000227345|chr10:49933618-49933618|T/-|frameshift_variant	115.49404669440601	0.023927554121326553	4				NaN	NaN	0	NaN	9002	3434	12431
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12448	32.695	NaN	7231.2	30	0	706.46	0.214	+			6143	AVQEFGLAR	9	80	495.7716876073053	989.5288222814106	2	495.7718505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVQEFGLAR_	ENSG00000169230|ENST00000303204|PRELID1;nc|ENSG00000169230|Q9Y255-2|PRELID1	120.8684288430529	0.02067403653475984	4				NaN	NaN	0	NaN	9009	3437	12447
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12449	32.698	NaN	8356	30	0	1689.8	0.106	+			51208	YPQPPSQSY	9	84	533.7457902947064	1065.4770276562126	2	533.7459106445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YPQPPSQSY_	ENSG00000138279|ENST00000372921|ANXA7;nc|ENSG00000138279|P20073|ANXA7	52.936696900407355	0.27249468807391813	4				NaN	NaN	0	NaN	9010	3437	12447
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12450	32.7	NaN	12303	30	0	1955.8	0.106	+			28173	NAPLVHATL	9	73	468.2685125765597	934.5224722199195	2	468.2688903808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NAPLVHATL_	ENSG00000082898|ENST00000401558|XPO1;ENST00000428210.5_1_2:61720980-61752425:-|nuORF	93.19546047674547	0.05585629608842056	4				NaN	NaN	0	NaN	9011	3437	12447
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12451	32.702	NaN	5637	30	0	1072.8	0.106	+			38189	SQEDAKLLIK	10	72	572.8313437691944	1143.6481346051887	2	572.832275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SQEDAKLLIK_	ENSG00000162753|ENST00000367714|SLC9C2;SLC9C2|p.K843Nfs*2|1|0.57|ENSG00000162753|chr1:173524080-173524080|T/-|frameshift_variant	78.26377905018397	0.20980573808910843	4				NaN	NaN	0	NaN	9012	3437	12447
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12452	32.704	NaN	4580.8	30	0	603.24	0.106	+			20939	KKAVPSAS	8	50	394.2368899497403	786.4592269662807	2	394.2371520996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KKAVPSAS_	CCDC180|p.K1351Sfs*28|1|0.14|ENSG00000197816|chr9:97364063-97364063|C/-|frameshift_variant;CCDC180|p.K1583Nfs*17|3|0.32|ENSG00000197816|chr9:97374551-97374551|C/-|frameshift_variant;ENSG00000197816|ENST00000529487|CCDC180;ENST00000375206.6_1_9:100053158-100139173:+|nuORF;nc|ENSG00000197816|Q9P1Z9|CCDC180	57.81127852772723	0.5234495074909924	4				NaN	NaN	0	NaN	9013	3437	12447
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12453	32.706	NaN	8021.2	30	0	1090	0.035	+			28320	NEFTTHVM	8	79	489.7201713539303	977.4257897746606	2	489.720947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NEFTTHVM_	ENSG00000167081|ENST00000373489|PBX3;ENSG00000185630|ENST00000420696|PBX1;ENSG00000204304|ENST00000375050|PBX2;ENST00000478678.5_1_6:32154995-32157692:-|nuORF;ENST00000538998.1_1_9:128606084-128725334:+|nuORF;nc|ENSG00000167081|P40426-2|PBX3;nc|ENSG00000167081|P40426-5|PBX3;nc|ENSG00000185630|P40424-2|PBX1;nc|ENSG00000185630|P40424-3|PBX1	102.7733458925114	0.2491487235419157	4				NaN	NaN	0	NaN	9014	3437	12447
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12454	32.706	NaN	6117.8	30	0	793.51	0.142	+			14396	GTALLHIYDK	10	77	565.8133840971205	1129.612215261041	2	565.8145141601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GTALLHIYDK_	ENSG00000165816|ENST00000392982|VWA2;nc|ENSG00000165816|Q5GFL6-2|VWA2;nc|ENSG00000165816|Q5GFL6-3|VWA2	65.15724298150197	0.31893571707528906	4				NaN	NaN	0	NaN	9015	3437	12447
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12468	32.737	NaN	57784	30	0	5697.4	0.214				-1	 	0	103	596.8463898826448	1191.6782268320894	2	596.8472900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9026	3440	12467
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12469	32.741	NaN	37204	30	0	4632.2	0.106	+			34507	RVFVVGVGMTK	11	64	398.233426625187	1191.678450475761	3	398.2337951660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RVFVVGVGMTK_	ENSG00000116171|ENST00000371514|SCP2;ENST00000528311.5_1_1:53392996-53413692:+|nuORF;nc|ENSG00000116171|P22307-3|SCP2;nc|ENSG00000116171|P22307-7|SCP2;nc|ENSG00000116171|P22307-8|SCP2	87.71336657091298	0.10813547024994734	4				NaN	NaN	0	NaN	9027	3440	12467
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12470	32.743	NaN	23214	30	0	4508.9	0.106				-1	 	0	77	539.7629206147124	1077.5112882962246	2	539.7638549804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9028	3440	12467
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12471	32.744	NaN	12070	30	0	2709.4	0.106	+			503	ACFEPANQMVK	11	79	619.287872851591	1236.561192769982	2	619.2886962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ACFEPANQMVK_	ENSG00000075886|ENST00000321253|TUBA3D;ENSG00000123416|ENST00000336023|TUBA1B;ENSG00000127824|ENST00000248437|TUBA4A;ENSG00000152086|ENST00000312988|TUBA3E;ENSG00000167552|ENST00000301071|TUBA1A;ENSG00000167553|ENST00000301072|TUBA1C;ENSG00000198033|ENST00000400113|TUBA3C;nc|ENSG00000123416|P68363-2|TUBA1B;nc|ENSG00000127824|P68366-2|TUBA4A;nc|ENSG00000167552|Q71U36-2|TUBA1A;nc|ENSG00000198033|P0DPH7-2|TUBA3C;TUBA3C|p.T361Rfs*18|1|0.17|ENSG00000198033|chr13:19174136-19174136|G/-|frameshift_variant;TUBA3D|p.G366Efs*13|1|0.17|ENSG00000075886|chr2:131482588-131482588|G/-|frameshift_variant;TUBA3D|p.V328Pfs*54|1|0.45|ENSG00000075886|chr2:131480665-131480666|-/CCCAAAGA|frameshift_variant	79.48907831485694	0.15663227531959176	4				NaN	NaN	0	NaN	9029	3440	12467
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12472	32.746	NaN	12978	30	0	4853.2	0.106	+			30798	QEALHTQML	9	78	535.767519873282	1069.520486813364	2	535.7686767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QEALHTQML_	ENSG00000137076|ENST00000314888|TLN1;nc|ENSG00000137076|Q9Y490-2|TLN1	72.87924865735499	0.12833875048249987	4				NaN	NaN	0	NaN	9030	3440	12467
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12473	32.748	NaN	14767	30	0	2219.5	0.106	+			44269	TSALPIIQK	9	86	485.79980184304253	969.5850507528851	2	485.79998779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TSALPIIQK_	ENSG00000147872|ENST00000276914|PLIN2;ENST00000472715.1_1_9:19126103-19127487:-|nuORF;ENST00000475923.1_1_9:19126103-19126313:-|nuORF;PLIN2|p.V348*|1|0.15|ENSG00000147872|chr9:19116520-19116520|C/-|frameshift_variant	98.62937762414208	0.04060045538121712	4				NaN	NaN	0	NaN	9031	3440	12467
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12474	32.75	NaN	10113	30	0	1649.2	0.036	+			26138	LSPTTIETAM	10	79	532.2704763561615	1062.5263997791228	2	532.27099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSPTTIETAM_	ENSG00000138378|ENST00000392320|STAT4	74.25504064058377	0.24255678544297835	4				NaN	NaN	0	NaN	9032	3440	12467
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12486	32.776	NaN	69554	30	0	25099	0.214	+			5149	ATSVITIVK	9	89	466.2941980970905	930.573843260981	2	466.2945251464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSVITIVK_	ENSG00000197063|ENST00000357736|MAFG	167.22876102047192	0.0032399547248545047	4				NaN	NaN	0	NaN	9041	3443	12485
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12487	32.779	NaN	17107	30	0	2534.1	0.106				-1	 	0	86	543.8183080062129	1085.6220630792257	2	543.8193969726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9042	3443	12485
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12488	32.781	NaN	25620	30	0	3675.4	0.106	+			36263	SENKLPAEL	9	93	500.7684878962806	999.5224228593612	2	500.7691955566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SENKLPAEL_	ENSG00000100823|ENST00000216714|APEX1;ENST00000557159.5_1_14:20924026-20925664:+|nuORF	112.10723106719422	0.02684780151337622	4				NaN	NaN	0	NaN	9043	3443	12485
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12489	32.783	NaN	13080	30	0	668.6	0.106	+			8681	EEAAVAIKAM	10	83	516.7756088164928	1031.5366646997854	2	516.7736206054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EEAAVAIKAM_	ENSG00000132507|ENST00000336458|EIF5A;ENSG00000253626|ENST00000520547|EIF5AL1;nc|ENSG00000132507|P63241-2|EIF5A	90.36981228632155	0.12895663264417576	4				NaN	NaN	0	NaN	9044	3443	12485
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12490	32.785	NaN	9761.2	30	0	1246.5	0.106				-1	 	0	81	522.3158366957633	1042.6171204583266	2	522.3164672851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9045	3443	12485
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12491	32.787	NaN	11249	30	0	1281.3	0.106	+			50669	YEEEMREL	8	85	549.7416059561891	1097.4686589791781	2	549.742431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YEEEMREL_	ENSG00000026025|ENST00000544301|VIM;ENST00000485947.1_1_10:17271421-17272784:+|nuORF	87.69643885390035	0.28444366722805053	4				NaN	NaN	0	NaN	9046	3443	12485
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12492	32.788	NaN	3294.3	30	0	354.45	0.038	+			41111	SVIRDYLVQK	10	73	610.8533058809028	1219.6920588286055	2	610.853759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVIRDYLVQK_	ENSG00000160695|ENST00000621676|VPS11;nc|ENSG00000160695|Q9H270|VPS11	51.72707519102574	0.4410859567146454	4				NaN	NaN	0	NaN	9047	3443	12485
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12502	32.81	NaN	6040.6	30	0	435.91	0.214	+			42113	SYLEKVRTL	9	82	554.8208676119282	1107.6271822906563	2	554.82177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SYLEKVRTL_	CON__P35900;ENSG00000171431|ENST00000167588|KRT20	93.5975768576971	0.05472259948179787	4				NaN	NaN	0	NaN	9054	3446	12501
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12503	32.814	NaN	5052.4	30	0	796.94	0.106			+	25996	LSKKNEFIY	9	74	571.3145589886444	1140.6145650440887	2	571.3145751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSKKNEFIY_	REV__tr|U7SFR8|U7SFR8_FUSNUBacterialtypeIIsecretionsystemproteinEdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02332PE=3SV=1	58.2462437865262	0.22823408064396822	4				NaN	NaN	0	NaN	9055	3446	12501
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12504	32.816	NaN	5833.5	30	0	808.61	0.106				-1	 	0	63	460.78124532802207	919.5479377228442	2	460.7816467285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9056	3446	12501
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12505	32.818	NaN	4699.6	30	0	1093.1	0.106				-1	 	0	68	385.89717925027986	1154.6697083510396	3	385.8974304199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9057	3446	12501
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12506	32.819	NaN	3354	30	0	291.28	0.106	+			38816	SSMVGVNLPQK	11	64	580.3098310539077	1158.6051091746153	2	580.3109741210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSMVGVNLPQK_	ENSG00000102144|ENST00000373316|PGK1;nc|ENSG00000102144|P00558-2|PGK1	82.7504851949679	0.12944296023181348	4				NaN	NaN	0	NaN	9058	3446	12501
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12507	32.821	NaN	3988.8	30	0	841.26	0.038	+			43468	TGNTSPFGHPF	11	40	387.8481952304977	1160.5227562916932	3	387.8482971191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TGNTSPFGHPF_	CREBBP|p.Q278H|1|0.06|ENSG00000005339|chr16:3810744-3810744|C/A|missense_variant	40.05817265558897	0.5571470695993369	4				NaN	NaN	0	NaN	9059	3446	12501
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12508	32.822	NaN	3743.2	30	0	778.63	0.145				-1	AIMDPLPLRTK	11	61	424.24390674319903	1269.7098908297971	3	424.2438049316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_AIM(Oxidation (M))DPLPLRTK_	AHR|p.D549Vfs*28|1|0.18|ENSG00000106546|chr7:17339471-17339474|ATTT/-|frameshift_variant;AHR|p.F562Sfs*16|1|0.24|ENSG00000106546|chr7:17339506-17339506|T/-|frameshift_variant;ENSG00000106546|ENST00000242057|AHR	31.068146907933308	0.6639116734509778	4				NaN	NaN	0	NaN	9060	3446	12501
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12524	32.857	NaN	17342	30	0	2654.8	0.214	+			45329	TVSGIQVRY	9	87	511.78410827727697	1021.553663621354	2	511.7854309082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVSGIQVRY_	ENSG00000129354|ENST00000250244|AP1M2;nc|ENSG00000129354|Q9Y6Q5-2|AP1M2	127.46168284122857	0.016682644177004526	4				NaN	NaN	0	NaN	9073	3449	12523
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12525	32.861	NaN	9374.3	30	0	1746.4	0.106				-1	 	0	75	478.2711211693284	954.5276894054568	2	478.2715759277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9074	3449	12523
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12526	32.863	NaN	6965.1	30	0	1553	0.106	+			7324	DATIVVKSY	9	79	498.27330924915816	994.5320655651163	2	498.27435302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DATIVVKSY_	ENSG00000130762|ENST00000378378|ARHGEF16	129.42129120953632	0.01549634589885217	4				NaN	NaN	0	NaN	9075	3449	12523
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12527	32.864	NaN	13413	30	0	1417.2	0.106	+			44127	TQAQSQKAK	9	78	495.27411408205444	NaN	0	495.2750244140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TQAQSQKAK_	RPL34|p.A109T|1|0.28|ENSG00000109475|chr4:108625183-108625183|G/A|missense_variant	65.46538089061403	0.1260090208616529	4				NaN	NaN	0	NaN	9076	3449	12523
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12528	32.866	NaN	17709	30	0	1481	0.106	+			39809	STLESIYQR	9	80	548.784824053234	1095.555095173268	2	548.7860107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STLESIYQR_	ENSG00000166888|ENST00000300134|STAT6;ENST00000555641.1_1_12:57499966-57502061:-|nuORF;STAT6|p.G815Efs*27|3|0.31|ENSG00000166888|chr12:57096672-57096672|C/-|frameshift_variant	176.44474024533739	0.0016668318535579616	4				NaN	NaN	0	NaN	9077	3449	12523
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12529	32.868	NaN	12175	30	0	1330.8	0.034			+	24590	LGPSGGGALVL	11	75	470.77638284417856	939.5382127551571	2	470.77667236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LGPSGGGALVL_	REV__ENSG00000174938|ENST00000617533|SEZ6L2;REV__nc|ENSG00000174938|Q6UXD5-2|SEZ6L2;REV__nc|ENSG00000174938|Q6UXD5-3|SEZ6L2;REV__nc|ENSG00000174938|Q6UXD5-4|SEZ6L2;REV__nc|ENSG00000174938|Q6UXD5-5|SEZ6L2;REV__nc|ENSG00000174938|Q6UXD5|SEZ6L2	58.78195531508484	0.3343278462358323	4				NaN	NaN	0	NaN	9078	3449	12523
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12530	32.869	NaN	8657.7	30	0	685.12	0.14			+	21558	KNYNDKIY	8	81	529.2688039144809	1056.5230548957618	2	529.27001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KNYNDKIY_	REV__tr|U7SRZ8|U7SRZ8_FUSNUDNA3'-5'helicaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01488PE=3SV=1	53.351449002276354	0.5676011784961348	4				NaN	NaN	0	NaN	9079	3449	12523
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12540	32.894	NaN	19091	30	0	5666.1	0.214	+			17459	ICHELDAIS	9	84	500.740549820649	999.466546708098	2	500.7420654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ICHELDAIS_	ENST00000439523.1_1_1:247206892-247207219:+|nuORF	63.30626980617807	0.18605348971131092	4				NaN	NaN	0	NaN	9086	3452	12539
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12541	32.897	NaN	23329	30	0	4245.7	0.106	+			16889	HPIEGSTTVF	10	71	544.2739184548277	1086.5332839764553	2	544.275146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HPIEGSTTVF_	ENSG00000169710|ENST00000306749|FASN	45.9519527083369	0.4943008177357963	4				NaN	NaN	0	NaN	9087	3452	12539
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12542	32.899	NaN	25841	30	0	2638.4	0.106	+			30219	PSRYALTI	8	80	460.7627154922366	919.5108780512733	2	460.76336669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PSRYALTI_	ENST00000488342.5_1_2:165365032-165477819:-|nuORF	84.9155231211612	0.2928622555056503	4				NaN	NaN	0	NaN	9088	3452	12539
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12543	32.901	NaN	9679.7	30	0	5006.2	0.106	+			41986	SVYENKLLNLT	11	65	431.9060213917734	1292.6962347755202	3	431.9065246582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVYENKLLNLT_	OLFM4|p.K132N|1|0.23|ENSG00000102837|chr13:53041948-53041948|G/T|missense_variant	27.64392233501311	0.6998289966465058	4				NaN	NaN	0	NaN	9089	3452	12539
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12544	32.903	NaN	4575.5	30	0	886.15	0.106	+			155	AAIEASQSL	9	63	445.23440375181855	888.4542545704371	2	445.2346496582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AAIEASQSL_	ENSG00000168297|ENST00000356151|PXK;nc|ENSG00000168297|Q7Z7A4-2|PXK;nc|ENSG00000168297|Q7Z7A4-4|PXK;nc|ENSG00000168297|Q7Z7A4-6|PXK	98.58198989935565	0.04066992115528678	4				NaN	NaN	0	NaN	9090	3452	12539
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12545	32.905	NaN	8046.6	30	0	945.3	0.034	+			12978	GETKSIVEL	9	68	488.2715768890081	NaN	0	488.2712707519531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GETKSIVEL_	BNC2|p.P330Lfs*7|1|0.75|ENSG00000173068|chr9:16437205-16437205|G/-|frameshift_variant;BNC2|p.P606Rfs*7|2|0.28|ENSG00000173068|chr9:16436377-16436377|G/-|frameshift_variant;ENSG00000169594|ENST00000345382|BNC1;ENSG00000173068|ENST00000380672|BNC2;nc|ENSG00000173068|Q6ZN30-2|BNC2	90.36981228632155	0.04085092656593507	4				NaN	NaN	0	NaN	9091	3452	12539
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12546	32.905	NaN	13330	30	0	964.95	0.138	+			18816	ITVGPRGPL	9	82	455.2788345526507	908.5431161721015	2	455.2791748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ITVGPRGPL_	ENSG00000121691|ENST00000241052|CAT	71.87747018426188	0.13267044672804276	4				NaN	NaN	0	NaN	9092	3452	12539
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12562	32.94	NaN	137510	30	0	19642	0.209	+			50465	YAEVGRVL	8	105	453.7550333403469	905.4955137474939	2	453.7554626464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YAEVGRVL_	ANKRD17|p.L2249Yfs*84|1|0.34|ENSG00000132466|chr4:73090884-73090884|G/-|frameshift_variant;ENSG00000131503|ENST00000360839|ANKHD1;ENSG00000132466|ENST00000358602|ANKRD17;ENST00000514252.1_1_4:73978989-74017230:-|nuORF;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1;nc|ENSG00000132466|O75179-2|ANKRD17;nc|ENSG00000132466|O75179-6|ANKRD17;nc|ENSG00000132466|O75179-7|ANKRD17	93.19546047674547	0.2677966331495483	4				NaN	NaN	0	NaN	9105	3455	12561
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12563	32.943	NaN	73242	30	0	7920.3	0.106	+			12997	GEVDPKVAL	9	94	464.2603520951895	926.506151257179	2	464.260498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEVDPKVAL_	ENSG00000099795|ENST00000215565|NDUFB7;ENST00000593353.5_1_19:14676947-14682853:-|nuORF	104.0567914643314	0.03506238181059741	4				NaN	NaN	0	NaN	9106	3455	12561
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12564	32.945	NaN	19173	30	0	8140.7	0.106			+	7870	DRHRKPFQ	8	63	361.8654394116423	1082.5744888351269	3	361.86590576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DRHRKPFQ_	REV__ENST00000305877.12_2_22:23522425-23523292:+|nuORF	18.324413293986947	0.7971860551947066	4				NaN	NaN	0	NaN	9107	3455	12561
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12565	32.947	NaN	12311	30	0	1642.1	0.106	+			12402	GEAEGLMKV	9	73	467.238465407588	932.4623778819761	2	467.2386779785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEAEGLMKV_	ENSG00000157637|ENST00000374759|SLC38A10;nc|ENSG00000157637|Q9HBR0-2|SLC38A10;nc|ENSG00000157637|Q9HBR0-3|SLC38A10;SLC38A10|p.R413W|1|0.54|ENSG00000157637|chr17:81260289-81260289|G/A|missense_variant	107.00750918261382	0.032051501805654005	4				NaN	NaN	0	NaN	9108	3455	12561
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12566	32.949	NaN	13752	30	0	1159.9	0.106			+	50951	YIDKARVA	8	85	468.2685125765597	934.5224722199195	2	469.2708740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YIDKARVA_	REV__ATF7IP|p.R1251H|1|0.38|ENSG00000171681|chr12:14498012-14498012|G/A|missense_variant;REV__ENSG00000171681|ENST00000261168|ATF7IP;REV__nc|ENSG00000171681|Q6VMQ6-4|ATF7IP;REV__nc|ENSG00000171681|Q6VMQ6-5|ATF7IP	44.53106598305862	0.628196326904373	4				NaN	NaN	0	NaN	9109	3455	12561
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12567	32.951	NaN	8521.8	30	0	920.73	0.035	+			45502	TYETKTALL	9	78	520.2864319619509	1038.5583109907018	2	520.2874755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TYETKTALL_	ENSG00000100242|ENST00000689035|SUN2;nc|ENSG00000100242|Q9UH99-2|SUN2;nc|ENSG00000100242|Q9UH99-3|SUN2	67.49366992349736	0.1516260258713357	4				NaN	NaN	0	NaN	9110	3455	12561
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12568	32.951	NaN	8761.4	30	0	1390.2	0.14	+			1309	AETARLTSF	9	84	498.26113667810756	994.5077204230151	2	498.2611389160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AETARLTSF_	ENSG00000166226|ENST00000299300|CCT2;ENST00000546859.5_1_12:69979244-69981900:+|nuORF;ENST00000549933.5_1_12:69979244-69980637:+|nuORF;ENST00000550455.5_1_12:69979244-69981425:+|nuORF;ENST00000550638.5_1_12:69979244-69982049:+|nuORF;ENST00000551620.5_1_12:69979244-69983508:+|nuORF	93.5975768576971	0.05472259948179787	4				NaN	NaN	0	NaN	9111	3455	12561
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12582	32.982	NaN	250370	30	0	38453	0.144	+			12617	GEIDGNKVTL	10	86	523.2794252782139	1044.5442976232277	2	523.2801513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEIDGNKVTL_	ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232319904-232323320:-|nuORF	128.60217544463768	0.01518043149187549	4				NaN	NaN	0	NaN	9122	3458	12581
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12583	32.984	NaN	31141	30	0	6943.3	0.106	+			24229	LESKGLTL	8	78	430.7575056202173	859.5004583072346	2	430.7576904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LESKGLTL_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;CLCA4|p.S847Kfs*4|1|0.28|ENSG00000016602|chr1:86580120-86580121|-/A|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1;ENSG00000016602|ENST00000370563|CLCA4	127.46168284122857	0.2238874366747666	4				NaN	NaN	0	NaN	9123	3458	12581
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12584	32.986	NaN	17347	30	0	5922.8	0.106	+			40121	STPLAGLAPK	10	82	477.7841526251416	953.5537523170832	2	477.7843322753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STPLAGLAPK_	BAZ2A|p.K1507Qfs*26|1|0.27|ENSG00000076108|chr12:56600770-56600771|-/G|frameshift_variant;ENSG00000076108|ENST00000549884|BAZ2A;nc|ENSG00000076108|Q9UIF9-2|BAZ2A;nc|ENSG00000076108|Q9UIF9-3|BAZ2A;nc|ENSG00000076108|Q9UIF9|BAZ2A	67.49366992349736	0.29779660154124327	4				NaN	NaN	0	NaN	9124	3458	12581
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12585	32.988	NaN	9034.3	30	0	846.68	0.106				-1	 	0	83	507.7310208380199	1013.4474887428398	2	507.7314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9125	3458	12581
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12586	32.99	NaN	9126.6	30	0	1237.7	0.106	+			25375	LPHAPGVQM	9	81	475.2492555940085	948.483958254817	2	475.2495422363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LPHAPGVQM_	ENSG00000116478|ENST00000373548|HDAC1;ENSG00000196591|ENST00000519065|HDAC2;ENST00000471488.1_1_1:32797142-32797421:+|nuORF;nc|ENSG00000196591|Q92769-3|HDAC2	68.484700416344	0.1473408039581241	4				NaN	NaN	0	NaN	9126	3458	12581
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12587	32.991	NaN	8393.6	30	0	641.63	0.106	+			49617	VYGVSKETF	9	82	515.2654870314313	1028.5164211296626	2	515.2664184570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VYGVSKETF_	ENSG00000164292|ENST00000379982|RHOBTB3;RHOBTB3|p.K539Rfs*53|1|0.25|ENSG00000164292|chr5:95783952-95783952|A/-|frameshift_variant	56.72105179125745	0.24094814563026265	4				NaN	NaN	0	NaN	9127	3458	12581
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12588	32.993	NaN	16596	30	0	3643.7	0.038	+			34819	RYLEQLHQL	9	84	600.3299021161951	1198.64525129919	2	600.3307495117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RYLEQLHQL_	ENSG00000168610|ENST00000264657|STAT3;nc|ENSG00000168610|P40763-2|STAT3;nc|ENSG00000168610|P40763-3|STAT3;STAT3|p.R729Afs*3|2|0.33|ENSG00000168610|chr17:42316861-42316861|G/-|frameshift_variant	91.26522074875469	0.06129826844580791	4				NaN	NaN	0	NaN	9128	3458	12581
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12606	33.03	NaN	23025	30	0	2985.2	0.214				-1	SECGKAFSL	9	82	499.7335296111752	997.4525062891504	2	499.7345275878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SEC(Carbamidomethyl (C))GKAFSL_	ENSG00000106261|ENST00000324306|ZKSCAN1;ENSG00000186230|ENST00000334181|ZNF749;ENSG00000186272|ENST00000307658|ZNF17;ENSG00000186812|ENST00000330501|ZNF397;ENSG00000198393|ENST00000328654|ZNF26;ENST00000602050.1_1_19:57930944-57932846:+|nuORF;nc|ENSG00000186272|P17021-3|ZNF17;nc|ENSG00000186272|P17021|ZNF17;ZNF852|p.G393S|1|0.24|ENSG00000178917|chr3:44499600-44499600|C/T|missense_variant	104.01359247289065	0.03510646158778409	4				NaN	NaN	0	NaN	9143	3461	12605
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12607	33.033	NaN	16635	30	0	4858.7	0.106			+	46467	VETCGSNKKG	10	83	511.7501215008112	1021.4856900684224	2	511.7508850097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VETCGSNKKG_	REV__ENSG00000145283|ENST00000273905|SLC10A6	75.04331003522576	0.23611669241777622	4				NaN	NaN	0	NaN	9144	3461	12605
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12608	33.035	NaN	17215	30	0	7887.3	0.106				-1	IIMLNVIFL	9	57	364.5571589259734	NaN	0	364.5572509765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_IIM(Oxidation (M))LNVIFL_	ADGRL3|p.H1275Lfs*11|1|0.08|ENSG00000150471|chr4:62070322-62070322|A/-|frameshift_variant;ENSG00000150471|ENST00000683033|ADGRL3;nc|ENSG00000150471|Q9HAR2-2|ADGRL3;nc|ENSG00000150471|Q9HAR2-4|ADGRL3;nc|ENSG00000150471|Q9HAR2|ADGRL3	44.116797842482775	0.2472372736944149	4				NaN	NaN	0	NaN	9145	3461	12605
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12609	33.037	NaN	6335.5	30	0	740.81	0.106	+			13024	GEVLISRV	8	61	436.7631335571065	871.5117141810131	2	436.763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEVLISRV_	AP2M1|p.I386Hfs*6|1|0.17|ENSG00000161203|chr3:184182844-184182845|-/C|frameshift_variant;ENSG00000161203|ENST00000292807|AP2M1;ENST00000466598.5_1_3:183894781-183896942:+|nuORF;ENST00000472560.5_1_3:183894781-183898834:+|nuORF;ENST00000484469.5_1_3:183894781-183895400:+|nuORF;ENST00000487958.5_1_3:183894781-183898060:+|nuORF;nc|ENSG00000161203|Q96CW1-2|AP2M1	77.31757898189308	0.345924878368729	4				NaN	NaN	0	NaN	9146	3461	12605
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12610	33.039	NaN	10802	30	0	1095.7	0.106	+			31722	QNVVAFDVY	9	88	527.7629095933956	1053.5112662535912	2	527.7642822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QNVVAFDVY_	ENSG00000185915|ENST00000379499|KLHL34	35.61828744233558	0.47037581924408073	4				NaN	NaN	0	NaN	9147	3461	12605
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12611	33.041	NaN	13447	30	0	996.12	0.038	+			34820	RYLEQLHQL	9	79	400.5553578712538	1198.6442442139614	3	400.55596923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RYLEQLHQL_	ENSG00000168610|ENST00000264657|STAT3;nc|ENSG00000168610|P40763-2|STAT3;nc|ENSG00000168610|P40763-3|STAT3;STAT3|p.R729Afs*3|2|0.33|ENSG00000168610|chr17:42316861-42316861|G/-|frameshift_variant	64.20726635412375	0.17854274437659667	4				NaN	NaN	0	NaN	9148	3461	12605
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12612	33.041	NaN	11725	30	0	2896.9	0.14	+			32476	QVMSLGLQK	9	90	502.2832397345483	1002.5519265358967	2	502.28411865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QVMSLGLQK_	ENST00000314423.11_1_16:69166475-69170710:+|nuORF;ENST00000562237.5_1_16:69166520-69170710:+|nuORF	82.7504851949679	0.08565546331141553	4				NaN	NaN	0	NaN	9149	3461	12605
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12627	33.073	NaN	181950	30	0	37958	0.199	+			39504	STFNQVVLK	9	113	518.2950198125425	1034.5754866918849	2	518.2954711914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STFNQVVLK_	ENSG00000063177|ENST00000549920|RPL18;ENST00000478088.1_1_16:76269257-76269449:-|nuORF;ENST00000547892.1_1_19:49120227-49120731:-|nuORF;ENST00000552347.5_1_19:49120227-49122400:-|nuORF;ENST00000552705.5_1_19:49119841-49122400:-|nuORF;ENST00000552851.1_1_19:49119841-49122400:-|nuORF;nc|ENSG00000063177|Q07020-2|RPL18	199.70438780651162	3.456851077920069E-05	4				NaN	NaN	0	NaN	9161	3464	12626
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12628	33.077	NaN	131170	30	0	29060	0.106	+			6287	AVSTFAMVK	9	100	477.2593214751536	952.5040900171073	2	477.2593688964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVSTFAMVK_	ENSG00000172893|ENST00000355527|DHCR7;ENST00000534701.1_1_11:71149825-71152361:-|nuORF	136.26810882979174	0.012230845423532208	4				NaN	NaN	0	NaN	9162	3464	12626
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12629	33.079	NaN	27853	30	0	2254.8	0.106	+			42854	TEFTNKNML	9	94	549.2662536027883	1096.5179542723765	2	549.267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TEFTNKNML_	ENSG00000167600|ENST00000310054|CYP2S1;nc|ENSG00000167600|Q96SQ9-2|CYP2S1	107.00750918261382	0.032051501805654005	4				NaN	NaN	0	NaN	9163	3464	12626
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12630	33.08	NaN	14181	30	0	1902.7	0.106	+			34830	RYMEVSGNL	9	75	534.760187366181	1067.5058217991618	2	534.7607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RYMEVSGNL_	ENSG00000183431|ENST00000373019|SF3A3	72.87924865735499	0.12833875048249987	4				NaN	NaN	0	NaN	9164	3464	12626
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12631	33.082	NaN	8239.9	30	0	772	0.106	+			10628	EYNSDLHQF	9	79	576.7520894656432	NaN	0	576.751708984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EYNSDLHQF_	BUB1|p.V819Gfs*61|1|0.11|ENSG00000169679|chr2:110642126-110642127|-/C|frameshift_variant;ENSG00000169679|ENST00000302759|BUB1;ENST00000465029.5_1_2:111419157-111435602:-|nuORF;nc|ENSG00000169679|O43683-2|BUB1;nc|ENSG00000169679|O43683-3|BUB1	176.44474024533739	0.005964492135656625	4				NaN	NaN	0	NaN	9165	3464	12626
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12632	33.084	NaN	7623.1	30	0	1107.9	0.106			+	11091	FFAPPFALFM	10	74	602.2999875149989	NaN	0	602.2998657226562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_FFAPPFALFM(Oxidation (M))_	REV__ENST00000254801.8_1_4:71521590-71521722:-|nuORF	54.76467175910256	0.2754795324328683	4				NaN	NaN	0	NaN	9166	3464	12626
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12633	33.086	NaN	9151.6	30	0	4998.8	0.036	+			3549	ASTGISDKPR	10	52	344.52222633496757	NaN	0	344.5221862792969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASTGISDKPR_	ENST00000322310.9_1_9:140084384-140084663:+|nuORF	32.81241826257853	0.3924360933802784	4				NaN	NaN	0	NaN	9167	3464	12626
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12650	33.118	NaN	1501800	30	0	600780	0.052	+			14993	GTMTGMLYK	9	80	501.2429407896773	1000.4713286461546	2	501.2439270019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTMTGMLYK_	ENSG00000178440|ENST00000651763|TIMM23B-AGAP6;ENSG00000204152|ENST00000651259|TIMM23B;ENSG00000265354|ENST00000580018|TIMM23;nc|ENSG00000204152|Q5SRD1-2|TIMM23B	131.03138772384656	0.014687601201650916	4				NaN	NaN	0	NaN	9181	3467	12649
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12651	33.119	NaN	423210	30	0	80336	0.106	+			44270	TSALPIIQK	9	81	485.79980184304253	969.5850507528851	2	485.8003845214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TSALPIIQK_	ENSG00000147872|ENST00000276914|PLIN2;ENST00000472715.1_1_9:19126103-19127487:-|nuORF;ENST00000475923.1_1_9:19126103-19126313:-|nuORF;PLIN2|p.V348*|1|0.15|ENSG00000147872|chr9:19116520-19116520|C/-|frameshift_variant	186.08907774512184	0.000684772772607045	4				NaN	NaN	0	NaN	9182	3467	12649
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12652	33.121	NaN	20677	30	0	3347.1	0.106	+			8643	EDKTISYQ	8	82	492.2375859428784	982.4606189525568	2	492.2371520996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EDKTISYQ_	MYO10|p.D302Y|1|0.3|ENSG00000145555|chr5:16779571-16779571|C/A|missense_variant	54.776311868738084	0.5534952410049249	4				NaN	NaN	0	NaN	9183	3467	12649
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12653	33.123	NaN	6658.2	30	0	2631.9	0.106	+			26755	LVPASRVAL	9	62	463.2942585227213	924.5739641122426	2	463.2948303222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LVPASRVAL_	ENSG00000158828|ENST00000321556|PINK1;ENST00000492302.1_1_1:20966360-20975203:+|nuORF;PINK1|p.G513Vfs*5|1|0.29|ENSG00000158828|chr1:20650480-20650480|G/-|frameshift_variant	51.33545320467046	0.2872990594074956	4				NaN	NaN	0	NaN	9184	3467	12649
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12654	33.125	NaN	5791.9	30	0	2094.4	0.106			+	-1	VVAFMVFLL	9	41	352.2058029398776	1053.5955794198328	3	352.20623779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_VVAFM(Oxidation (M))VFLL_	REV__ENSG00000172292|ENST00000305747|CERS6;REV__nc|ENSG00000172292|Q6ZMG9-2|CERS6	21.9598887501803	0.5980208138527809	4				NaN	NaN	0	NaN	9185	3467	12649
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12655	33.127	NaN	14039	30	0	1143.5	0.106	+			43107	TERDLREVF	9	81	582.8039123696698	1163.5932718061395	2	582.8047485351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TERDLREVF_	ENSG00000136527|ENST00000453386|TRA2B;ENSG00000164548|ENST00000297071|TRA2A;ENST00000494255.5_1_7:23547037-23556014:-|nuORF;nc|ENSG00000136527|P62995-3|TRA2B;nc|ENSG00000164548|Q13595-2|TRA2A;nc|ENSG00000164548|Q13595-3|TRA2A;nc|ENSG00000164548|Q13595-4|TRA2A	101.45984612302182	0.0377122763612125	4				NaN	NaN	0	NaN	9186	3467	12649
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12656	33.129	NaN	9215.1	30	0	2522.3	0.106	+			37571	SLMVVYTPI	9	84	511.78410827727697	1021.553663621354	2	511.28411865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SLMVVYTPI_	ABCA6|p.D1552Gfs*18|1|0.04|ENSG00000154262|chr17:69081107-69081108|-/C|frameshift_variant;ABCA6|p.I1144Mfs*6|1|0.11|ENSG00000154262|chr17:69091239-69091240|-/CTTTTCCC|frameshift_variant;ABCA6|p.N544Kfs*4|1|0.41|ENSG00000154262|chr17:69114912-69114913|-/T|frameshift_variant;ENSG00000154262|ENST00000284425|ABCA6;nc|ENSG00000154262|Q8N139-2|ABCA6;nc|ENSG00000154262|Q8N139-3|ABCA6	53.351449002276354	0.2690372970092375	4				NaN	NaN	0	NaN	9187	3467	12649
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12657	33.13	NaN	7958.9	30	0	789.29	0.036			+	24854	LKDTREVDE	9	80	552.7797561170307	1103.5449593008614	2	552.7802124023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_LKDTREVDE_	REV__tr|U7T3E3|U7T3E3_FUSNUPeptide/nickeltransportsystemsubstrate-bindingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00609PE=3SV=1	51.19269402634007	0.2889735674168909	4				NaN	NaN	0	NaN	9188	3467	12649
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12671	33.159	NaN	96538	30	0	19135	0.209	+			51513	YVRELYTV	8	120	521.7816267930388	1041.5487006528774	2	521.782470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YVRELYTV_	ENSG00000101977|ENST00000519895|MCF2;MCF2|p.R820Kfs*12|1|0.54|ENSG00000101977|chrX:139587779-139587780|-/T|frameshift_variant;nc|ENSG00000101977|P10911-2|MCF2;nc|ENSG00000101977|P10911-3|MCF2;nc|ENSG00000101977|P10911-4|MCF2;nc|ENSG00000101977|P10911-6|MCF2;nc|ENSG00000101977|P10911|MCF2	45.97224482568171	0.6192535143389125	4				NaN	NaN	0	NaN	9199	3470	12670
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12672	33.162	NaN	17343	30	0	1001.3	0.106	+			8299	EAIREAVVY	9	91	525.2850743879877	NaN	0	525.2852172851562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EAIREAVVY_	ENSG00000080608|ENST00000397885|PUM3	82.7504851949679	0.061958946529908215	4				NaN	NaN	0	NaN	9200	3470	12670
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12673	33.164	NaN	19867	30	0	4092.6	0.106	+			47596	VRRETEEVF	9	90	388.87175176183	1163.59342588569	3	388.871826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VRRETEEVF_	ENSG00000158055|ENST00000361548|GRHL3;nc|ENSG00000158055|Q8TE85-2|GRHL3;nc|ENSG00000158055|Q8TE85-3|GRHL3;nc|ENSG00000158055|Q8TE85-4|GRHL3;nc|ENSG00000158055|Q8TE85|GRHL3	27.882242232435846	0.5426732730940306	4				NaN	NaN	0	NaN	9201	3470	12670
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12674	33.166	NaN	10443	30	0	1118	0.106				-1	 	0	67	460.78124532802207	919.5479377228442	2	460.78167724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9202	3470	12670
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12675	33.168	NaN	4017.5	30	0	1007.6	0.106	+			21016	KKIFMLAAS	9	48	336.86812635045385	1007.5825496515615	3	336.86883544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KKIFMLAAS_	ENSG00000205189|ENST00000455036|ZBTB10;nc|ENSG00000205189|Q96DT7-2|ZBTB10;nc|ENSG00000205189|Q96DT7-3|ZBTB10;nc|ENSG00000205189|Q96DT7-4|ZBTB10	20.94693142431847	0.6074874384046576	4				NaN	NaN	0	NaN	9203	3470	12670
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12676	33.17	NaN	8306.2	30	0	814.01	0.035	+			26095	LSNHSTQVM	9	87	508.7468448955768	NaN	0	508.7470397949219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSNHSTQVM_	ENST00000381341.6_1_2:15746298-15747313:+|nuORF	40.77816245573522	0.2702456086868081	4				NaN	NaN	0	NaN	9204	3470	12670
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12677	33.17	NaN	14293	30	0	783.41	0.143	+			19914	KEFDGKSLVSV	11	85	604.829652486177	1207.644752039154	2	604.8307495117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KEFDGKSLVSV_	ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;ENST00000517330.1_1_5:77337712-77337985:-|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P;nc|ENSG00000205940|Q58FF8|HSP90AB2P	147.73206827945663	7.428873318560114E-05	4				NaN	NaN	0	NaN	9205	3470	12670
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12689	33.197	NaN	69008	30	0	16728	0.214	+			11213	FIAPTGHSL	9	76	471.75536774005786	941.4961825469157	2	471.7557067871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FIAPTGHSL_	ENSG00000125354|ENST00000394610|SEPTIN6;ENSG00000138758|ENST00000264893|SEPTIN11;nc|ENSG00000125354|Q14141-3|SEPTIN6;nc|ENSG00000125354|Q14141-4|SEPTIN6;nc|ENSG00000125354|Q14141|SEPTIN6;nc|ENSG00000138758|Q9NVA2-2|SEPTIN11	124.59426212874841	0.018418509520798258	4				NaN	NaN	0	NaN	9214	3473	12688
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12690	33.2	NaN	39264	30	0	5718.5	0.106				-1	 	0	100	505.2446476328573	1008.4747423325147	2	505.245361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9215	3473	12688
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12691	33.202	NaN	19054	30	0	6306.3	0.106				-1	 	0	57	361.86906550252326	1082.5853671077698	3	361.86956787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9216	3473	12688
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12692	33.204	NaN	9400	30	0	2058.8	0.106	+			38081	SPSVVHCL	8	66	421.21510219981747	840.415651466435	2	421.21563720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SPSVVHCL_	ENST00000590168.5_1_17:74467717-74469013:-|nuORF	46.76643321282427	0.6143254112625767	4				NaN	NaN	0	NaN	9217	3473	12688
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12693	33.206	NaN	6335.8	30	0	1215.2	0.106	+			49975	WAGATSLAAL	10	67	480.7608491882873	959.5071454433746	2	480.76104736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_WAGATSLAAL_	ENSG00000125864|ENST00000377873|BFSP1	44.116797842482775	0.5112108506279902	4				NaN	NaN	0	NaN	9218	3473	12688
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12694	33.208	NaN	5399.1	30	0	781.05	0.037			+	9039	EGEVQLALER	10	76	572.3031959252461	1142.591838917292	2	572.3038940429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EGEVQLALER_	REV__DDX43|p.G365Vfs*2|2|0.35|ENSG00000080007|chr6:73408009-73408009|A/-|frameshift_variant;REV__ENSG00000080007|ENST00000370336|DDX43	51.52775601994872	0.4429225830406686	4				NaN	NaN	0	NaN	9219	3473	12688
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12695	33.208	NaN	4407.6	30	0	285.38	0.14			+	28714	NNKHAEDVV	9	70	513.2525634765625	NaN	0	513.2525634765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NNKHAEDVV_	REV__tr|U7SVK6|U7SVK6_FUSNURibosomalRNAsmallsubunitmethyltransferaseIOS=FusobacteriumnucleatumCTI-5OX=1316586GN=rsmIPE=3SV=1	39.252832667884924	0.27938773122138094	4				NaN	NaN	0	NaN	9220	3473	12688
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12709	33.24	NaN	18702	30	0	5135	0.214	+			46462	VETAKVYQL	9	79	525.7940338819359	1049.5735148306717	2	525.7950439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VETAKVYQL_	ENSG00000137815|ENST00000389629|RTF1;RTF1|p.D528Ifs*12|1|0.29|ENSG00000137815|chr15:41477182-41477182|G/-|frameshift_variant	124.08010499294276	0.018729767491916592	4				NaN	NaN	0	NaN	9231	3476	12708
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12710	33.243	NaN	10974	30	0	1919.3	0.106	+			17787	IETLTKTAL	9	81	495.2972715585993	988.5799901839986	2	495.29766845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IETLTKTAL_	ENSG00000197879|ENST00000648651|MYO1C;nc|ENSG00000197879|O00159-2|MYO1C;nc|ENSG00000197879|O00159-3|MYO1C	82.7504851949679	0.08565546331141553	4				NaN	NaN	0	NaN	9232	3476	12708
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12711	33.245	NaN	11358	30	0	1189.6	0.106	+			28057	NAARDFVNY	9	79	535.256269949979	1068.497986966758	2	535.2574462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NAARDFVNY_	DHX9|p.L1065Cfs*20|1|0.41|ENSG00000135829|chr1:182883563-182883563|C/-|frameshift_variant;DHX9|p.L657Ffs*44|1|0.34|ENSG00000135829|chr1:182876197-182876198|-/T|frameshift_variant;DHX9|p.Q155Lfs*8|1|0.08|ENSG00000135829|chr1:182853404-182853405|-/TG|frameshift_variant;ENSG00000135829|ENST00000367549|DHX9	96.66504779109242	0.04607440320619715	4				NaN	NaN	0	NaN	9233	3476	12708
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12712	33.247	NaN	8069.3	30	0	665.32	0.106	+			8745	EEFPNTCKM	9	88	549.7331942525517	1097.4518355719033	2	549.73388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EEFPNTCKM_	ENSG00000102910|ENST00000285737|LONP2;LONP2|p.D678Efs*7|1|0.07|ENSG00000102910|chr16:48347601-48347602|-/GT|frameshift_variant;nc|ENSG00000102910|Q86WA8-2|LONP2	56.43379154798735	0.2433427591689151	4				NaN	NaN	0	NaN	9234	3476	12708
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12713	33.249	NaN	9825.1	30	0	1345.4	0.106	+			47866	VSLGLAVSK	9	73	437.2733157399134	872.5320785466268	2	437.2736511230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSLGLAVSK_	ENSG00000018869|ENST00000586929|ZNF582;ENSG00000197302|ENST00000316491|KRBOX5;ENSG00000197566|ENST00000311331|ZNF624;ENST00000529943.6_1_16:31724760-31765604:+|nuORF;ENST00000534277.5_1_16:31724760-31767037:+|nuORF;ENST00000579983.1_1_17:16534952-16537956:-|nuORF;ZNF624|p.I325Nfs*9|1|0.21|ENSG00000197566|chr17:16623912-16623913|-/T|frameshift_variant;ZNF624|p.I325Sfs*167|1|0.46|ENSG00000197566|chr17:16623913-16623913|T/-|frameshift_variant;ZNF624|p.K498Nfs*74|1|0.49|ENSG00000197566|chr17:16623392-16623392|T/-|frameshift_variant;ZNF624|p.K666Nfs*130|1|0.46|ENSG00000197566|chr17:16622888-16622888|T/-|frameshift_variant;ZNF624|p.K787Ifs*14|1|0.11|ENSG00000197566|chr17:16622526-16622527|-/ATAAATGTAATGAA|frameshift_variant	83.6470233535746	0.08277643980271215	4				NaN	NaN	0	NaN	9235	3476	12708
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12714	33.251	NaN	7961.9	30	0	1243.9	0.037			+	17494	IDEDRSNLVL	10	72	587.3086803771097	1172.6028078210193	2	587.3090209960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IDEDRSNLVL_	REV__CCDC168|p.G6141Lfs*25|1|0.03|ENSG00000175820|chr13:102732276-102732277|-/AGGAAAAATCACCAAACACTAG|frameshift_variant;REV__CCDC168|p.K5937Nfs*10|1|0.37|ENSG00000175820|chr13:102732886-102732886|T/-|frameshift_variant;REV__CCDC168|p.K6236Nfs*3|1|0.42|ENSG00000175820|chr13:102731989-102731989|T/-|frameshift_variant;REV__ENSG00000175820|ENST00000322527|CCDC168	63.53385203322761	0.33370026130094593	4				NaN	NaN	0	NaN	9236	3476	12708
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12715	33.251	NaN	6516.9	30	0	774.62	0.141	+			36361	SESVLKVM	8	63	446.7438379599568	891.4731229867136	2	446.7441101074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SESVLKVM_	ENST00000449643.1_1_10:25464657-25465068:-|nuORF	73.97473282117947	0.3737790450121076	4				NaN	NaN	0	NaN	9237	3476	12708
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12726	33.277	NaN	34566	30	0	3271	0.214				-1	 	0	89	521.3362720365021	1040.6579911398042	2	521.337158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9245	3479	12725
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12727	33.28	NaN	5953	30	0	850.96	0.106	+			41239	SVLGISTPK	9	71	451.2707937579266	900.5270345826532	2	451.270751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVLGISTPK_	ENSG00000151327|ENST00000280987|FAM177A1;nc|ENSG00000151327|Q8N128|FAM177A1	80.45461616416974	0.09558281504443908	4				NaN	NaN	0	NaN	9246	3479	12725
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12728	33.282	NaN	7187	30	0	904.28	0.106	+			42997	TEKKIPVVF	9	82	530.823174135642	1059.631795338084	2	530.8239135742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TEKKIPVVF_	ENSG00000139684|ENST00000378720|ESD	58.78195531508484	0.22376836668196862	4				NaN	NaN	0	NaN	9247	3479	12725
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12729	33.284	NaN	6528.9	30	0	727.88	0.106	+			51042	YLCNVRHIF	9	71	582.8039123696698	1163.5932718061395	2	582.8050537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YLCNVRHIF_	ENSG00000029639|ENST00000367166|TFB1M	44.116797842482775	0.37197099687881774	4				NaN	NaN	0	NaN	9248	3479	12725
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12730	33.286	NaN	4067.3	30	0	370.62	0.106	+			27095	MANADLVKY	9	74	512.7618036259039	1023.5090543186078	2	512.760498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MANADLVKY_	ENSG00000145868|ENST00000340253|FBXO38;FBXO38|p.N697Kfs*44|1|0.3|ENSG00000145868|chr5:148427376-148427377|-/A|frameshift_variant;FBXO38|p.N697Tfs*32|1|0.21|ENSG00000145868|chr5:148427377-148427377|A/-|frameshift_variant;FBXO38|p.S849Afs*20|1|0.38|ENSG00000145868|chr5:148427834-148427834|G/-|frameshift_variant;nc|ENSG00000145868|Q6PIJ6-2|FBXO38;nc|ENSG00000145868|Q6PIJ6-3|FBXO38	63.53385203322761	0.18415635464017938	4				NaN	NaN	0	NaN	9249	3479	12725
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12731	33.288	NaN	5919.9	30	0	857.93	0.037			+	42670	TAWDRIVLF	9	83	374.2105015024932	1119.6096751076795	3	374.2124938964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TAWDRIVLF_	REV__ENST00000216484.6_1_14:77974806-77974902:-|nuORF	38.80614096846853	0.43426287593479557	4				NaN	NaN	0	NaN	9250	3479	12725
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12732	33.288	NaN	6626.2	30	0	534.12	0.139			+	4764	ATNARRQL	8	76	465.2665481888867	NaN	0	465.26513671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATNARRQL_	REV__AARS2|p.T871Nfs*21|1|0.42|ENSG00000124608|chr6:44301451-44301452|-/T|frameshift_variant;REV__ENSG00000124608|ENST00000244571|AARS2	34.172542307311794	1.7418937515398478	4				NaN	NaN	0	NaN	9251	3479	12725
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12746	33.32	NaN	20066	30	0	1656.1	0.214	+			41461	SVNNSIFYR	9	93	550.2810588332895	1098.547564733379	2	550.2805786132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVNNSIFYR_	DHX16|p.I1033*|5|0.32|ENSG00000204560|chr6:30653271-30653271|T/-|frameshift_variant;DHX16|p.R868Lfs*15|1|0.04|ENSG00000204560|chr6:30655493-30655493|C/-|frameshift_variant;ENSG00000204560|ENST00000376442|DHX16	96.0336014099291	0.047854655524928534	4				NaN	NaN	0	NaN	9262	3482	12745
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12747	33.323	NaN	11379	30	0	4676.6	0.106	+			7153	DAFGYATLK	9	73	493.25230600550447	984.490059077809	2	493.2530212402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DAFGYATLK_	ENSG00000164327|ENST00000357387|RICTOR;nc|ENSG00000164327|Q6R327-3|RICTOR;RICTOR|p.S1495Pfs*13|1|0.05|ENSG00000164327|chr5:38945642-38945643|-/ATTCTGGG|frameshift_variant	42.396135135203025	0.392153681582562	4				NaN	NaN	0	NaN	9263	3482	12745
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12748	33.325	NaN	7063.1	30	0	766.98	0.106	+			5935	AVLHYGLAH	9	70	490.7690447356382	979.5235365380764	2	490.7692565917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVLHYGLAH_	DNHD1|p.S3597Rfs*6|1|0.1|ENSG00000179532|chr11:6565718-6565719|-/AG|frameshift_variant;DNHD1|p.T4259Pfs*33|2|0.33|ENSG00000179532|chr11:6568772-6568772|C/-|frameshift_variant;ENSG00000179532|ENST00000254579|DNHD1	60.403631409065575	0.21025000616765316	4				NaN	NaN	0	NaN	9264	3482	12745
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12749	33.327	NaN	6070.4	30	0	2593.3	0.106			+	37180	SIYKYIVKV	9	68	371.5615835193053	1111.662921158116	3	371.56207275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SIYKYIVKV_	REV__ENST00000480440.5_1_1:86847891-86851212:-|nuORF	37.81151784470057	0.4459294069877048	4				NaN	NaN	0	NaN	9265	3482	12745
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12750	33.329	NaN	9021.8	30	0	823.06	0.106	+			36475	SEVSKIVTV	9	79	481.2810925877832	960.5476322423664	2	481.2809753417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SEVSKIVTV_	ENSG00000163535|ENST00000357799|SGO2;nc|ENSG00000163535|Q562F6-2|SGO2	85.86182877749512	0.07653218437724067	4				NaN	NaN	0	NaN	9266	3482	12745
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12751	33.331	NaN	6082.9	30	0	816.45	0.036	+			17758	IERPTYTNL	9	83	553.794466016823	1105.5743791004459	2	553.7962036132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IERPTYTNL_	ENSG00000075886|ENST00000321253|TUBA3D;ENSG00000123416|ENST00000336023|TUBA1B;ENSG00000127824|ENST00000248437|TUBA4A;ENSG00000152086|ENST00000312988|TUBA3E;ENSG00000167552|ENST00000301071|TUBA1A;ENSG00000167553|ENST00000301072|TUBA1C;ENSG00000183785|ENST00000330423|TUBA8;ENSG00000198033|ENST00000400113|TUBA3C;ENSG00000243910|ENST00000490341|TUBA4B;ENST00000530835.1_1_11:90015825-90016947:+|nuORF;nc|ENSG00000127824|P68366-2|TUBA4A;nc|ENSG00000167552|Q71U36-2|TUBA1A;nc|ENSG00000183785|Q9NY65-2|TUBA8;nc|ENSG00000198033|P0DPH7-2|TUBA3C;TUBA3C|p.T361Rfs*18|1|0.17|ENSG00000198033|chr13:19174136-19174136|G/-|frameshift_variant;TUBA3D|p.G366Efs*13|1|0.17|ENSG00000075886|chr2:131482588-131482588|G/-|frameshift_variant;TUBA3D|p.V328Pfs*54|1|0.45|ENSG00000075886|chr2:131480665-131480666|-/CCCAAAGA|frameshift_variant;TUBA4A|p.R229H|1|0.38|ENSG00000127824|chr2:219251013-219251013|C/T|missense_variant	83.6470233535746	0.08277643980271215	4				NaN	NaN	0	NaN	9267	3482	12745
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12752	33.331	NaN	3572.6	30	0	562.02	0.14	+			49023	VVGPVSLPR	9	69	462.28676444763823	922.5589759620765	2	462.2870178222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VVGPVSLPR_	ENSG00000170776|ENST00000394518|AKAP13;nc|ENSG00000170776|Q12802-2|AKAP13;nc|ENSG00000170776|Q12802-4|AKAP13	54.776311868738084	0.25715957988447635	4				NaN	NaN	0	NaN	9268	3482	12745
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12765	33.366	NaN	69874	30	0	10671	0.214	+			8503	EATGQFHVY	9	105	526.2453780788209	1050.4762032244416	2	526.2466430664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EATGQFHVY_	CEACAM6|p.I217Mfs*11|3|0.07|ENSG00000086548|chr19:41761474-41761475|-/G|frameshift_variant;chr19:41756959-41758061|166|203.57|0.0|24.28|+|2|CEACAM6,None|1;ENSG00000079385|ENST00000161559|CEACAM1;ENSG00000086548|ENST00000199764|CEACAM6;ENSG00000170956|ENST00000357396|CEACAM3;ENST00000344391.9_1_19:43023158-43032553:-|nuORF;ENST00000377806.7_1_19:43023094-43032607:-|nuORF;ENST00000403136.1_1_19:43025413-43032607:-|nuORF;nc|ENSG00000079385|P13688-10|CEACAM1;nc|ENSG00000079385|P13688-11|CEACAM1;nc|ENSG00000079385|P13688-2|CEACAM1;nc|ENSG00000079385|P13688-3|CEACAM1;nc|ENSG00000079385|P13688-4|CEACAM1;nc|ENSG00000079385|P13688-5|CEACAM1;nc|ENSG00000079385|P13688-6|CEACAM1;nc|ENSG00000079385|P13688-7|CEACAM1;nc|ENSG00000079385|P13688-8|CEACAM1;nc|ENSG00000079385|P13688-9|CEACAM1;nc|ENSG00000170956|P40198-2|CEACAM3;nc|ENSG00000170956|P40198-3|CEACAM3	172.03106254824962	0.0024202251894594514	4				NaN	NaN	0	NaN	9278	3485	12764
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12766	33.37	NaN	18893	30	0	2456.4	0.106	+			17374	IALVHTDSY	9	89	509.76352819438586	1017.5125034555717	2	509.7643737792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IALVHTDSY_	ENSG00000198961|ENST00000361189|PJA2;nc|ENSG00000198961|O43164-2|PJA2;PJA2|p.D450Rfs*6|1|0.16|ENSG00000198961|chr5:109368682-109368683|-/T|frameshift_variant	143.8867514904718	0.008656634767784652	4				NaN	NaN	0	NaN	9279	3485	12764
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12767	33.372	NaN	23666	30	0	3761.4	0.106	+			36844	SIFGGAKPV	9	73	438.2524841934206	874.4904154536413	2	438.2529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SIFGGAKPV_	ENSG00000063046|ENST00000262056|EIF4B;ENST00000432132.2_1_9:98909238-98910135:+|nuORF;ENST00000432307.1_1_X:110862947-110863739:-|nuORF;nc|ENSG00000063046|P23588-2|EIF4B	82.24051045832904	0.08786059719216216	4				NaN	NaN	0	NaN	9280	3485	12764
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12768	33.374	NaN	21408	30	0	3174.6	0.106				-1	 	0	85	522.7997703437227	1043.5849877542453	2	522.8012084960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9281	3485	12764
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12769	33.375	NaN	14252	30	0	1027.1	0.106			+	29493	PCVKRVEL	8	78	472.2731625129574	942.5317720927148	2	472.2740173339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PCVKRVEL_	REV__ENSG00000101236|ENST00000358395|RNF24;REV__nc|ENSG00000101236|Q9Y225-2|RNF24	55.50420428727701	0.5462892107279674	4				NaN	NaN	0	NaN	9282	3485	12764
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12770	33.377	NaN	37791	30	0	14214	0.036	+			30663	QAVILDQKY	9	96	539.2998950781024	1076.5852372230047	2	539.3012084960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QAVILDQKY_	ENSG00000127831|ENST00000248444|VIL1	181.4070731898895	0.0011547877412507563	4				NaN	NaN	0	NaN	9283	3485	12764
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12771	33.378	NaN	16197	30	0	1730	0.14	+			24910	LKNYINSH	8	83	494.76273936639376	987.5109257995875	2	494.7655029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LKNYINSH_	tr|U7SU67|U7SU67_FUSNUNon-specificserine/threonineproteinkinaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01120PE=4SV=1	74.25504064058377	0.37144338840759816	4				NaN	NaN	0	NaN	9284	3485	12764
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12786	33.411	NaN	52102	30	0	5774.2	0.201	+			14826	GTLIDNQFK	9	88	518.2762717325073	NaN	0	518.277099609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTLIDNQFK_	ENSG00000018610|ENST00000644802|STEEP1;ENST00000469448.1_1_X:118673692-118676584:-|nuORF;nc|ENSG00000018610|Q9H5V9-2|STEEP1;nc|ENSG00000018610|Q9H5V9-3|STEEP1	93.5975768576971	0.03434413464716124	4				NaN	NaN	0	NaN	9296	3488	12785
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12787	33.415	NaN	8334.5	30	0	700.4	0.106			+	6750	CDPCRHPR	8	69	492.218947096751	982.423341260302	2	492.21917724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_CDPCRHPR_	REV__ENSG00000176472|ENST00000314228|ZNF575	60.97194046774394	0.49215940876911696	4				NaN	NaN	0	NaN	9297	3488	12785
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12788	33.417	NaN	5415.1	30	0	975.57	0.106	+			26549	LTSGIFETK	9	70	498.2735947522085	994.532636571217	2	498.2738342285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LTSGIFETK_	ENSG00000087460|ENST00000371085|GNAS;ENST00000313949.11_1_20:57415898-57485881:+|nuORF;ENST00000371075.7_3_20:57415898-57485881:+|nuORF;ENST00000476196.5_1_20:57478538-57485881:+|nuORF;ENST00000477931.5_1_20:57464155-57485881:+|nuORF;ENST00000480975.5_1_20:57464272-57485881:+|nuORF;ENST00000487981.5_1_20:57478601-57484479:+|nuORF;ENST00000496934.5_1_20:57473969-57485881:+|nuORF;GNAS|p.R201C|2|0.33|ENSG00000087460|chr20:58909365-58909365|C/T|missense_variant;nc|ENSG00000087460|P63092-2|GNAS;nc|ENSG00000087460|P63092-3|GNAS;nc|ENSG00000087460|P63092-4|GNAS;nc|ENSG00000087460|Q5JWF2-2|GNAS;nc|ENSG00000087460|Q5JWF2|GNAS	70.8162118820467	0.13725933411854815	4				NaN	NaN	0	NaN	9298	3488	12785
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12789	33.418	NaN	15725	30	0	3314	0.106	+			16940	HPNLVVGGTY	10	77	528.7766696967226	1055.538786460245	2	528.77734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HPNLVVGGTY_	ENSG00000077380|ENST00000397119|DYNC1I2;ENSG00000158560|ENST00000447467|DYNC1I1;ENST00000435916.1_1_10:52025510-52026503:+|nuORF;ENST00000479806.1_1_2:172583261-172604396:+|nuORF;nc|ENSG00000077380|Q13409-2|DYNC1I2;nc|ENSG00000077380|Q13409-3|DYNC1I2;nc|ENSG00000077380|Q13409-5|DYNC1I2;nc|ENSG00000077380|Q13409-6|DYNC1I2;nc|ENSG00000077380|Q13409-7|DYNC1I2;nc|ENSG00000158560|O14576-3|DYNC1I1;nc|ENSG00000158560|O14576-4|DYNC1I1;nc|ENSG00000158560|O14576-5|DYNC1I1;nc|ENSG00000158560|O14576|DYNC1I1	60.1669710687717	0.3643216362415131	4				NaN	NaN	0	NaN	9299	3488	12785
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12790	33.42	NaN	12170	30	0	1354	0.106	+			48725	VTVAAETVLA	10	88	487.2808297767442	972.5471066202884	2	487.2813415527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTVAAETVLA_	ENST00000360415.7_1_7:65617938-65618154:+|nuORF	56.72105179125745	0.3956618550748046	4				NaN	NaN	0	NaN	9300	3488	12785
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12791	33.422	NaN	6241.9	30	0	1024.9	0.037	+			47359	VPESSLAGHSF	11	79	565.7768519199742	1129.5391509067483	2	565.77783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VPESSLAGHSF_	ENSG00000184900|ENST00000332859|SUMO3;ENST00000397898.7_1_21:46226868-46228953:-|nuORF;nc|ENSG00000184900|P55854-2|SUMO3	132.757866228626	0.0010835938929688693	4				NaN	NaN	0	NaN	9301	3488	12785
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12792	33.423	NaN	15163	30	0	4335.8	0.146				-1	 	0	60	402.2356268625888	1203.6850511879663	3	402.2359313964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9302	3488	12785
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12808	33.459	NaN	90234	30	0	18307	0.214				-1	 	0	106	569.7897080299044	1137.5648631266088	2	569.790771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9315	3491	12807
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12809	33.463	NaN	28993	30	0	2832.1	0.106	+			23421	LACGVAKVL	9	80	465.77475137782153	929.5349498224431	2	465.7751159667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LAC(Carbamidomethyl (C))GVAKVL_	ENSG00000265972|ENST00000582401|TXNIP	119.55681237560556	0.021468056596162587	4				NaN	NaN	0	NaN	9316	3491	12807
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12810	33.465	NaN	41869	30	0	12577	0.106	+			38499	SSATTSPFFK	10	96	536.768608038054	1071.522663142908	2	536.769287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSATTSPFFK_	ENSG00000133961|ENST00000555238|NUMB;nc|ENSG00000133961|P49757-2|NUMB;nc|ENSG00000133961|P49757-3|NUMB;nc|ENSG00000133961|P49757-4|NUMB;nc|ENSG00000133961|P49757-5|NUMB;nc|ENSG00000133961|P49757-6|NUMB;nc|ENSG00000133961|P49757-7|NUMB;nc|ENSG00000133961|P49757-8|NUMB;nc|ENSG00000133961|P49757-9|NUMB	163.1509380574825	0.005863099200027773	4				NaN	NaN	0	NaN	9317	3491	12807
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12811	33.467	NaN	26289	30	0	6770.4	0.106				-1	 	0	83	542.7684518006663	1083.5223506681325	2	542.7694091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9318	3491	12807
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12812	33.468	NaN	22794	30	0	5028.5	0.106	+			13129	GGLPERSVSL	10	88	507.78156150585903	1013.5485700785181	2	507.7822570800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GGLPERSVSL_	ENSG00000088247|ENST00000600480|KHSRP;KHSRP|p.G221Rfs*37|1|0.43|ENSG00000088247|chr19:6418822-6418823|-/G|frameshift_variant;KHSRP|p.G663Vfs*60|1|0.14|ENSG00000088247|chr19:6415280-6415280|C/-|frameshift_variant;KHSRP|p.Q699Sfs*24|1|0.35|ENSG00000088247|chr19:6415173-6415173|G/-|frameshift_variant;nc|ENSG00000088247|Q92945|KHSRP	51.52775601994872	0.4429225830406686	4				NaN	NaN	0	NaN	9319	3491	12807
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12813	33.47	NaN	10816	30	0	1433.7	0.035			+	8214	EAEATILEL	9	80	494.76273936639376	987.5109257995875	2	495.2625427246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EAEATILEL_	REV__ENSG00000135951|ENST00000393483|TSGA10;REV__ENST00000489546.5_1_2:99635091-99688291:-|nuORF	68.78682469695295	0.14603441672067394	4				NaN	NaN	0	NaN	9320	3491	12807
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12828	33.502	NaN	41281	30	0	4373.5	0.214	+			10728	FADQEVRSL	9	94	532.7716387288747	1063.5287245245493	2	532.7725830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FADQEVRSL_	ENSG00000011405|ENST00000691414|PIK3C2A	136.98908636845044	0.011892605960677736	4				NaN	NaN	0	NaN	9332	3494	12827
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12829	33.505	NaN	13685	30	0	2599.1	0.106				-1	 	0	73	459.2863783671855	916.558203801171	2	459.28662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9333	3494	12827
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12830	33.507	NaN	26980	30	0	6077.9	0.106	+			14994	GTMTGMLYK	9	82	501.2429407896773	1000.4713286461546	2	501.2430419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTMTGMLYK_	ENSG00000178440|ENST00000651763|TIMM23B-AGAP6;ENSG00000204152|ENST00000651259|TIMM23B;ENSG00000265354|ENST00000580018|TIMM23;nc|ENSG00000204152|Q5SRD1-2|TIMM23B	67.49366992349736	0.1516260258713357	4				NaN	NaN	0	NaN	9334	3494	12827
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12831	33.509	NaN	16667	30	0	3243.1	0.106	+			9605	ELLQFNINV	9	80	545.3000036001878	1088.5854542671755	2	545.3009033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ELLQFNINV_	ENSG00000108100|ENST00000374704|CCNY;ENSG00000163249|ENST00000295414|CCNYL1;ENST00000468768.1_1_2:208615415-208618419:+|nuORF;ENST00000596710.1_1_19:21934351-21934702:+|nuORF;nc|ENSG00000108100|Q8ND76-2|CCNY;nc|ENSG00000108100|Q8ND76-3|CCNY;nc|ENSG00000163249|Q8N7R7-2|CCNYL1;nc|ENSG00000163249|Q8N7R7-3|CCNYL1	45.9519527083369	0.35044536499095585	4				NaN	NaN	0	NaN	9335	3494	12827
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12832	33.511	NaN	12733	30	0	1983.1	0.106	+			29031	NSTFNQVVLK	10	89	575.3157529131707	1148.6169528931414	2	575.3171997070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NSTFNQVVLK_	ENSG00000063177|ENST00000549920|RPL18;ENST00000547892.1_1_19:49120227-49120731:-|nuORF;ENST00000552347.5_1_19:49120227-49122400:-|nuORF;ENST00000552705.5_1_19:49119841-49122400:-|nuORF;ENST00000552851.1_1_19:49119841-49122400:-|nuORF;nc|ENSG00000063177|Q07020-2|RPL18	91.26522074875469	0.12383023862516404	4				NaN	NaN	0	NaN	9336	3494	12827
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12833	33.513	NaN	8436.7	30	0	1765.6	0.033				-1	 	0	62	450.234089811678	898.453626690156	2	450.2345275878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9337	3494	12827
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12834	33.513	NaN	13854	30	0	5520.7	0.141	+			27989	MVSRMVSTM	9	70	558.2483298903677	1114.4821068475353	2	558.2491455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term),2 Oxidation (M)	_(Acetyl (Protein N-term))M(Oxidation (M))VSRMVSTM(Oxidation (M))_	ENSG00000166922|ENST00000300175|SCG5;nc|ENSG00000166922|P05408-2|SCG5;SCG5|p.E75Vfs*25|1|0.15|ENSG00000166922|chr15:32643815-32643816|-/TC|frameshift_variant	60.97194046774394	0.20551255781574032	4				NaN	NaN	0	NaN	9338	3494	12827
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12845	33.539	NaN	26282	30	0	8210.6	0.214			+	32722	RAMILWNP	8	77	500.7745110786048	999.5344692240096	2	500.77459716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RAMILWNP_	REV__ENST00000392876.7_1_12:104187029-104187729:-|nuORF	47.91560031466742	0.6071945918984287	4				NaN	NaN	0	NaN	9346	3497	12844
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12846	33.543	NaN	6508.6	30	0	1104.4	0.106	+			2218	ALRKSFEM	8	75	491.2615919542461	980.5086309752922	2	491.2623596191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ALRKSFEM_	ENSG00000278311|ENST00000613102|GGNBP2;GGNBP2|p.D388Vfs*15|1|0.2|ENSG00000278311|chr17:36581474-36581475|-/GT|frameshift_variant;GGNBP2|p.V346Yfs*20|2|0.22|ENSG00000278311|chr17:36581354-36581354|A/-|frameshift_variant;nc|ENSG00000278311|Q9H3C7-3|GGNBP2	31.954861631926434	0.7126016770032289	4				NaN	NaN	0	NaN	9347	3497	12844
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12847	33.545	NaN	10166	30	0	730.66	0.106			+	44257	TSALALLGKP	10	75	485.79980184304253	969.5850507528851	2	485.7992858886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TSALALLGKP_	REV__ENST00000404251.1_1_7:72856149-72856371:-|nuORF	58.78195531508484	0.37691818691852547	4				NaN	NaN	0	NaN	9348	3497	12844
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12848	33.547	NaN	6182.2	30	0	326.33	0.106			+	30727	QDKRQSLR	8	80	515.7917607020481	1029.5689684708962	2	515.78955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QDKRQSLR_	REV__ENSG00000128567|ENST00000378555|PODXL;REV__ENST00000446198.5_1_7:131189072-131193853:-|nuORF;REV__ENST00000484346.1_1_7:131189072-131190857:-|nuORF;REV__nc|ENSG00000128567|O00592-2|PODXL	45.97224482568171	0.6192535143389125	4				NaN	NaN	0	NaN	9349	3497	12844
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12849	33.548	NaN	3894.4	30	0	294.7	0.106			+	26041	LSLISPNV	8	63	421.7522768005634	841.4900006679268	2	421.7524719238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSLISPNV_	REV__tr|U7SUG6|U7SUG6_FUSNUMFStransporter,AGZAfamily,xanthine/uracilpermeaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01415PE=3SV=1	63.30626980617807	0.4690498839812213	4				NaN	NaN	0	NaN	9350	3497	12844
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12850	33.55	NaN	4263.6	30	0	877.28	0.035				-1	 	0	46	336.53376358563514	1006.5794613571054	3	336.5340881347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9351	3497	12844
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12851	33.551	NaN	7684.3	30	0	584.42	0.139				-1	 	0	70	478.77924915245814	955.5439453717163	2	479.271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9352	3497	12844
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12866	33.584	NaN	32105	30	0	9307.9	0.214			+	43881	TMRDMIKK	8	91	519.7761262031519	1037.5376994731037	2	519.777099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_TMRDM(Oxidation (M))IKK_	REV__ENSG00000106927|ENST00000265132|AMBP;REV__ENST00000540645.5_1_9:116823569-116838999:-|nuORF	68.78682469695295	0.41700713582915416	4				NaN	NaN	0	NaN	9364	3500	12865
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12867	33.588	NaN	52664	30	0	5512.6	0.106	+			8122	DYMKTTSNF	9	101	553.7440377724545	1105.4735226117089	2	553.7449951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DYMKTTSNF_	ENSG00000165525|ENST00000298310|NEMF;nc|ENSG00000165525|O60524-3|NEMF;nc|ENSG00000165525|O60524-4|NEMF;NEMF|p.K641Rfs*9|1|0.15|ENSG00000165525|chr14:49802721-49802721|T/-|frameshift_variant;NEMF|p.M879*|1|0.12|ENSG00000165525|chr14:49789558-49789558|T/-|frameshift_variant;NEMF|p.M879Nfs*10|1|0.13|ENSG00000165525|chr14:49789557-49789558|-/T|frameshift_variant	204.4243087208965	1.4601778531241419E-05	4				NaN	NaN	0	NaN	9365	3500	12865
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12868	33.59	NaN	9958.8	30	0	1596	0.106	+			7404	DEHAGVISV	9	76	463.7320322997589	925.4495116663178	2	463.7322692871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DEHAGVISV_	ENSG00000134248|ENST00000602318|LAMTOR5;ENST00000531779.1_1_1:110946539-110950281:-|nuORF	56.72105179125745	0.24094814563026265	4				NaN	NaN	0	NaN	9366	3500	12865
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12869	33.591	NaN	31638	30	0	3708	0.106				-1	 	0	85	478.77924915245814	955.5439453717163	2	478.779541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9367	3500	12865
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12870	33.593	NaN	12806	30	0	1977.2	0.106	+			29804	PKCDGQVL	8	68	430.2201523151669	858.4257516971338	2	430.2206115722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PKCDGQVL_	ENSG00000006607|ENST00000264042|FARP2;ENST00000473082.5_1_2:242312627-242344774:+|nuORF;nc|ENSG00000006607|O94887-2|FARP2;nc|ENSG00000006607|O94887-3|FARP2	71.29570347882199	0.39610197767395533	4				NaN	NaN	0	NaN	9368	3500	12865
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12871	33.595	NaN	8160.6	30	0	804.62	0.033	+			10919	FDKPVSPL	8	75	451.7523006410694	901.4900483489388	2	451.7525634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FDKPVSPL_	ENSG00000104879|ENST00000221476|CKM;ENSG00000131730|ENST00000254035|CKMT2;ENSG00000166165|ENST00000348956|CKB;ENSG00000223572|ENST00000413453|CKMT1A;ENSG00000237289|ENST00000441322|CKMT1B;nc|ENSG00000237289|P12532-2|CKMT1A	64.20726635412375	0.4601301477144759	4				NaN	NaN	0	NaN	9369	3500	12865
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12872	33.596	NaN	7499.5	30	0	895.6	0.139	+			9897	EQLTKSVL	8	91	459.26796865482646	916.5213843764529	2	459.2681884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EQLTKSVL_	ENST00000217426.6_1_20:32868554-32868599:-|nuORF	82.7504851949679	0.3006553482314138	4				NaN	NaN	0	NaN	9370	3500	12865
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12886	33.627	NaN	238630	30	0	25130	0.214				-1	 	0	108	466.7555490472209	931.4965451612418	2	466.75579833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9381	3503	12885
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12887	33.631	NaN	21333	30	0	9302.3	0.106	+			31862	QPVKVLGENY	10	79	573.8106396816484	1145.6067264300966	2	573.8117065429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QPVKVLGENY_	ENSG00000108883|ENST00000426333|EFTUD2;ENST00000586276.5_1_17:42937766-42940268:-|nuORF;ENST00000590367.5_1_17:42931463-42950195:-|nuORF;nc|ENSG00000108883|Q15029-2|EFTUD2;nc|ENSG00000108883|Q15029-3|EFTUD2	72.87924865735499	0.25379688738724415	4				NaN	NaN	0	NaN	9382	3503	12885
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12888	33.633	NaN	10002	30	0	663.74	0.106	+			35437	SASDLRWLK	9	77	538.2975643318123	1074.5805757304245	2	538.2987670898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SASDLRWLK_	ENST00000312037.5_1_5:149826506-149829126:-|nuORF;ENST00000407193.5_1_5:149826506-149829126:-|nuORF	86.88156770896713	0.07365720931774442	4				NaN	NaN	0	NaN	9383	3503	12885
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12889	33.634	NaN	11984	30	0	2654.9	0.106				-1	 	0	62	359.2007831300169	1074.5805199902507	3	359.2012939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9384	3503	12885
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12890	33.636	NaN	8805.8	30	0	1415.9	0.106			+	26032	LSLGLVAPGL	10	77	470.2972210830263	NaN	0	470.2972717285156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSLGLVAPGL_	REV__ENSG00000169962|ENST00000339381|TAS1R3;REV__TAS1R3|p.H387Sfs*13|1|0.24|ENSG00000169962|chr1:1332688-1332689|-/T|frameshift_variant;REV__TAS1R3|p.L606Wfs*43|1|0.42|ENSG00000169962|chr1:1333711-1333711|G/-|frameshift_variant	58.78195531508484	0.24422493511477816	4				NaN	NaN	0	NaN	9385	3503	12885
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12891	33.638	NaN	9908.8	30	0	1500.4	0.037	+			17039	HPVSEGTLMY	10	74	567.2676873801767	1132.5208218271532	2	567.2689819335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HPVSEGTLMY_	CHPF2|p.N513Kfs*133|1|0.29|ENSG00000033100|chr7:151237898-151237899|-/A|frameshift_variant;ENSG00000033100|ENST00000035307|CHPF2;nc|ENSG00000033100|Q9P2E5-2|CHPF2	84.9155231211612	0.16018353804806162	4				NaN	NaN	0	NaN	9386	3503	12885
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12892	33.639	NaN	9281.9	30	0	758.72	0.141	+			50493	YALQVHCY	8	84	527.2450423640119	1052.4755317948236	2	527.2452392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_YALQVHC(Carbamidomethyl (C))Y_	ENSG00000110321|ENST00000339995|EIF4G2;ENST00000525606.5_1_11:10819365-10820979:-|nuORF;ENST00000534470.1_1_11:10820460-10820850:-|nuORF;nc|ENSG00000110321|P78344-2|EIF4G2	134.11898256796542	0.23640168232941985	4				NaN	NaN	0	NaN	9387	3503	12885
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12901	33.661	NaN	13047	30	0	1925	0.214	+			14773	GTKYIFMVK	9	69	362.87143710789417	1085.5924819238826	3	362.8721008300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTKYIFMVK_	ENSG00000101871|ENST00000317552|MID1;nc|ENSG00000101871|O15344-2|MID1	51.52775601994872	0.28504342437107444	4				NaN	NaN	0	NaN	9393	3506	12900
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12902	33.664	NaN	13728	30	0	3142.4	0.106			+	28706	NNIAYRLR	8	79	510.2911699447236	1018.5677869562472	2	510.2923278808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NNIAYRLR_	REV__ENSG00000103657|ENST00000443617|HERC1	57.81127852772723	0.5234495074909924	4				NaN	NaN	0	NaN	9394	3506	12900
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12903	33.666	NaN	13171	30	0	3751.7	0.106			+	25202	LMKRIAMSN	9	87	532.2919735241583	1062.5693941151164	2	532.2930908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LMKRIAMSN_	REV__tr|U7SUG2|U7SUG2_FUSNUAcylcarrierproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01144PE=4SV=1	42.396135135203025	0.392153681582562	4				NaN	NaN	0	NaN	9395	3506	12900
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12904	33.668	NaN	21179	30	0	10327	0.106	+			43607	TIMPKDIQLAR	11	73	429.24752805419007	1284.7207547627702	3	429.2481384277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TIMPKDIQLAR_	ENSG00000132475|ENST00000254810|H3-3B;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000168148|ENST00000366696|H3-4;ENSG00000183598|ENST00000331491|H3C13;ENSG00000188375|ENST00000340398|H3-5;ENSG00000197153|ENST00000359303|H3C12;ENSG00000197409|ENST00000356476|H3C4;ENSG00000203811|ENST00000369158|H3C14;ENSG00000203852|ENST00000403683|H3C15;ENSG00000273983|ENST00000614378|H3C8;ENSG00000274750|ENST00000614911|H3C6;ENSG00000275379|ENST00000616365|H3C11;ENSG00000275714|ENST00000613854|H3C1;ENSG00000277775|ENST00000618052|H3C7;ENSG00000278828|ENST00000685041|H3C10;ENST00000404612.1_1_6:26322106-26322214:-|nuORF;ENST00000593254.1_1_17:73774678-73775846:-|nuORF	31.634271133179894	0.6579734920221648	4				NaN	NaN	0	NaN	9396	3506	12900
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12905	33.67	NaN	11332	30	0	2316.5	0.106	+			42252	TAAQGLGPSL	10	68	457.7511644903258	NaN	0	457.750732421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TAAQGLGPSL_	ENST00000375001.7_1_9:101763171-101765741:+|nuORF	85.16082228582465	0.07406536248925066	4				NaN	NaN	0	NaN	9397	3506	12900
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12906	33.672	NaN	16846	30	0	4758.6	0.034	+			13202	GIATTFINK	9	84	482.7762814095846	963.5380098859692	2	482.7766418457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GIATTFINK_	ENSG00000183258|ENST00000330503|DDX41;ENST00000503078.5_1_5:176938794-176943460:-|nuORF;ENST00000505081.5_1_5:176938794-176940626:-|nuORF;ENST00000507900.5_1_5:176938794-176942272:-|nuORF	104.0567914643314	0.03506238181059741	4				NaN	NaN	0	NaN	9398	3506	12900
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12907	33.672	NaN	5692.5	30	0	695.68	0.142				-1	ATCPQPWRY	9	66	589.7737819344404	1177.5330109356807	2	589.7747802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_ATC(Carbamidomethyl (C))PQPWRY_	ENC1|p.G499Vfs*26|1|0.12|ENSG00000171617|chr5:74634990-74634990|C/-|frameshift_variant;ENSG00000171617|ENST00000302351|ENC1;nc|ENSG00000171617|O14682-2|ENC1	36.446750945000026	0.4619375763483977	4				NaN	NaN	0	NaN	9399	3506	12900
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12917	33.696	NaN	48585	30	0	17267	0.214				-1	 	0	105	329.21782158317654	984.6316353497297	3	329.21826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9406	3509	12916
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12918	33.699	NaN	19249	30	0	1867.8	0.106	+			49970	WAEEGQRVL	9	93	544.2802733184028	NaN	0	544.2800903320312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WAEEGQRVL_	ENSG00000196155|ENST00000379344|PLEKHG4;ENST00000563969.5_1_16:67314567-67322708:+|nuORF;nc|ENSG00000196155|Q58EX7-2|PLEKHG4;PLEKHG4|p.L616Wfs*32|1|0.43|ENSG00000196155|chr16:67284862-67284862|G/-|frameshift_variant	86.88156770896713	0.04788281539324305	4				NaN	NaN	0	NaN	9407	3509	12916
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12919	33.701	NaN	11111	30	0	1647	0.106	+			6887	CLLVWAQL	8	74	473.2644322349346	944.5143115366692	2	473.2654724121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_CLLVWAQL_	ENST00000521792.2_1_8:43125532-43126024:-|nuORF	90.93900077235594	0.2746275503875687	4				NaN	NaN	0	NaN	9408	3509	12916
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12920	33.703	NaN	6495.4	30	0	850.51	0.106	+			12316	GDFKEISSV	9	70	491.24822343656047	980.481893939921	2	491.24774169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GDFKEISSV_	ENSG00000148773|ENST00000368654|MKI67;MKI67|p.K319Rfs*27|1|0.35|ENSG00000148773|chr10:128115454-128115454|C/-|frameshift_variant;MKI67|p.L2374*|1|0.28|ENSG00000148773|chr10:128104719-128104719|A/-|frameshift_variant;MKI67|p.L783Hfs*49|1|0.05|ENSG00000148773|chr10:128110447-128110448|-/TG|frameshift_variant;MKI67|p.L783Yfs*49|1|0.05|ENSG00000148773|chr10:128110446-128110447|-/GT|frameshift_variant;MKI67|p.R3036Yfs*27|1|0.04|ENSG00000148773|chr10:128102735-128102736|-/AAAATAA|frameshift_variant;MKI67|p.T672Nfs*4|1|0.25|ENSG00000148773|chr10:128112000-128112001|-/T|frameshift_variant	80.45461616416974	0.09558281504443908	4				NaN	NaN	0	NaN	9409	3509	12916
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12921	33.705	NaN	33061	30	0	8887.8	0.106	+			40351	STTQVVGILK	10	85	523.3156284589378	1044.6167039846755	2	523.3162231445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STTQVVGILK_	ENSG00000198898|ENST00000361183|CAPZA2;ENST00000426421.5_1_7:116544367-116557918:+|nuORF	117.5257442709337	0.03082425562130952	4				NaN	NaN	0	NaN	9410	3509	12916
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12922	33.707	NaN	21604	30	0	2783.7	0.106	+			17020	HPTVVISAY	9	83	493.7685149292026	985.5224769252052	2	493.7683410644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HPTVVISAY_	CCT3|p.A379Lfs*9|1|0.21|ENSG00000163468|chr1:156312061-156312061|C/-|frameshift_variant;CCT3|p.K197Nfs*23|1|0.17|ENSG00000163468|chr1:156320857-156320857|T/-|frameshift_variant;CCT3|p.L350Ffs*9|1|0.49|ENSG00000163468|chr1:156312146-156312147|-/A|frameshift_variant;ENSG00000163468|ENST00000295688|CCT3;nc|ENSG00000163468|P49368-2|CCT3	63.30626980617807	0.18605348971131092	4				NaN	NaN	0	NaN	9411	3509	12916
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12923	33.709	NaN	14706	30	0	4131.2	0.037			+	-1	QVLTPAQLMQ	10	69	382.20715052821754	1143.5996221848527	3	382.2070007324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_QVLTPAQLM(Oxidation (M))Q_	REV__ENSG00000178904|ENST00000392250|DPY19L3;REV__nc|ENSG00000178904|Q6ZPD9-2|DPY19L3	45.02220120713402	0.5028680121232791	4				NaN	NaN	0	NaN	9412	3509	12916
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12934	33.732	NaN	189140	30	0	28381	0.214	+			29171	NVIRDAVTY	9	113	525.781766082046	1049.548979230892	2	525.7828369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NVIRDAVTY_	ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2	104.01359247289065	0.03510646158778409	4				NaN	NaN	0	NaN	9420	3512	12933
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12935	33.736	NaN	55746	30	0	6765.9	0.106	+			44316	TSFDGSLIQK	10	90	548.2878989136655	1094.5612448941308	2	548.2879028320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TSFDGSLIQK_	ENSG00000177485|ENST00000557385|ZBTB33	173.39201167336012	0.002607008819474693	4				NaN	NaN	0	NaN	9421	3512	12933
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12936	33.738	NaN	23318	30	0	3105.1	0.106			+	19011	IVVRRDYF	8	77	534.3033232337658	1066.5920935343315	2	534.3040771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IVVRRDYF_	REV__ENSG00000157014|ENST00000448281|TATDN2	44.116797842482775	0.6307669463330267	4				NaN	NaN	0	NaN	9422	3512	12933
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12937	33.74	NaN	3397.9	30	0	347.07	0.106			+	-1	IGPMGAIHLPC	11	67	583.29736328125	NaN	0	583.29736328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_IGPMGAIHLPC(Carbamidomethyl (C))_	REV__ENSG00000175189|ENST00000309668|INHBC	31.954861631926434	0.423006731851301	4				NaN	NaN	0	NaN	9423	3512	12933
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12938	33.742	NaN	6653.3	30	0	656.69	0.106	+			36775	SIALFKKV	8	72	453.29405272687	904.57355252054	2	453.29376220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SIALFKKV_	SMPDL3B|p.G173Vfs*31|1|0.33|ENSG00000130768|chr1:27953352-27953352|A/-|frameshift_variant	33.51558372728122	0.7005509609380386	4				NaN	NaN	0	NaN	9424	3512	12933
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12939	33.744	NaN	10955	30	0	822.43	0.034	+			35934	SEGIRVQAL	9	85	486.77866953291397	NaN	0	486.77789306640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SEGIRVQAL_	ENSG00000198589|ENST00000651943|LRBA;LRBA|p.L2590*|1|0.41|ENSG00000198589|chr4:150310342-150310342|A/-|frameshift_variant;LRBA|p.T2011Qfs*11|1|0.19|ENSG00000198589|chr4:150599022-150599022|T/-|frameshift_variant;nc|ENSG00000198589|P50851-2|LRBA;nc|ENSG00000198589|P50851|LRBA	87.69643885390035	0.04624013146650493	4				NaN	NaN	0	NaN	9425	3512	12933
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12957	33.78	NaN	302070	30	0	119650	0.064				-1	 	0	78	329.21782158317654	984.6316353497297	3	329.2184143066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9440	3515	12956
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12958	33.781	NaN	392590	30	0	34763	0.055	+			6685	AYVHMVTHF	9	110	552.7677574953982	1103.5209620575963	2	552.76904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AYVHMVTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	180.49460243208492	0.0012463884455128954	4				NaN	NaN	0	NaN	9441	3515	12956
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12959	33.782	NaN	122470	30	0	17466	0.106	+			46558	VFIDKQTNL	9	89	539.2999335413439	1076.5853141494877	2	539.3012084960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VFIDKQTNL_	ENSG00000048740|ENST00000633077|CELF2;ENSG00000149187|ENST00000687097|CELF1;nc|ENSG00000048740|O95319-2|CELF2;nc|ENSG00000048740|O95319-3|CELF2;nc|ENSG00000048740|O95319-4|CELF2;nc|ENSG00000048740|O95319-5|CELF2;nc|ENSG00000048740|O95319|CELF2;nc|ENSG00000149187|Q92879-2|CELF1;nc|ENSG00000149187|Q92879-3|CELF1;nc|ENSG00000149187|Q92879-4|CELF1;nc|ENSG00000149187|Q92879-5|CELF1;nc|ENSG00000149187|Q92879-6|CELF1;nc|ENSG00000149187|Q92879|CELF1	143.37361013837676	0.008897369944672323	4				NaN	NaN	0	NaN	9442	3515	12956
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12960	33.784	NaN	17205	30	0	9818.6	0.106	+			18086	IKNGLVKL	8	70	442.7995799319975	883.5846069307951	2	442.7999572753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IKNGLVKL_	ENSG00000150961|ENST00000280551|SEC24D;nc|ENSG00000150961|O94855-2|SEC24D	105.26878712358291	0.24777199087279123	4				NaN	NaN	0	NaN	9443	3515	12956
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12961	33.786	NaN	5505.9	30	0	987.06	0.106				-1	 	0	53	378.2782925633327	754.5420321934654	2	378.2785339355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9444	3515	12956
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12962	33.788	NaN	4944.9	30	0	1266.2	0.106			+	26653	LVEPLLKR	8	45	323.214272345069	966.620987635407	3	323.2147521972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LVEPLLKR_	REV__ENSG00000092096|ENST00000354772|SLC22A17;REV__nc|ENSG00000092096|Q8WUG5|SLC22A17	31.954861631926434	0.7126016770032289	4				NaN	NaN	0	NaN	9445	3515	12956
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12963	33.789	NaN	17913	30	0	2130.7	0.106	+			42046	SWNAVPASI	9	79	472.74502070932965	943.4754884854593	2	472.74566650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SWNAVPASI_	ENSG00000185873|ENST00000332644|TMPRSS11B	62.107414245175825	0.1960472003779324	4				NaN	NaN	0	NaN	9446	3515	12956
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12964	33.791	NaN	13262	30	0	2969.6	0.033	+			47835	VSLANTKH	8	71	435.2451876720856	868.4758224109712	2	435.24591064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_VSLANTKH_	nc|ENSG00000002079|Q9H6N6|MYH16	47.657333605630114	0.6087971902037268	4				NaN	NaN	0	NaN	9447	3515	12956
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12974	33.811	NaN	70631	30	0	25563	0.191	+			5213	ATTSVITIVK	10	103	516.8180420268576	1031.621531120515	2	516.8187255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATTSVITIVK_	ENSG00000198517|ENST00000343242|MAFK	94.4091291819064	0.10583072883246657	4				NaN	NaN	0	NaN	9454	3518	12973
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12975	33.814	NaN	31308	30	0	4668.4	0.106				-1	 	0	85	472.2816129736061	942.5486730140123	2	472.28173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9455	3518	12973
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12976	33.816	NaN	16920	30	0	1487.9	0.106	+			36462	SEVMGEPHL	9	84	499.73367652681793	997.4528001204359	2	499.7345886230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEVMGEPHL_	ENSG00000132963|ENST00000380842|POMP	53.351449002276354	0.2690372970092375	4				NaN	NaN	0	NaN	9456	3518	12973
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12977	33.818	NaN	14870	30	0	3340.5	0.106	+			51104	YLTVQNTV	8	73	469.25187272674583	936.4891925202917	2	469.2525634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YLTVQNTV_	ENSG00000123130|ENST00000379303|ACOT9;nc|ENSG00000123130|Q9Y305-2|ACOT9;nc|ENSG00000123130|Q9Y305-3|ACOT9;nc|ENSG00000123130|Q9Y305|ACOT9	53.351449002276354	0.5676011784961348	4				NaN	NaN	0	NaN	9457	3518	12973
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12978	33.82	NaN	12344	30	0	927.57	0.106	+			13040	GEVVKELSV	9	77	480.2738183618943	958.5330837905886	2	480.273681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GEVVKELSV_	ENSG00000050405|ENST00000341247|LIMA1;nc|ENSG00000050405|Q9UHB6-2|LIMA1;nc|ENSG00000050405|Q9UHB6-3|LIMA1;nc|ENSG00000050405|Q9UHB6-4|LIMA1;nc|ENSG00000050405|Q9UHB6-5|LIMA1	85.86182877749512	0.07653218437724067	4				NaN	NaN	0	NaN	9458	3518	12973
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12979	33.822	NaN	4870.3	30	0	629.08	0.106	+			37131	SITSEVFNK	9	77	512.7698688905789	1023.5251848479578	2	512.7693481445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SITSEVFNK_	ENSG00000092201|ENST00000216297|SUPT16H;ENST00000556217.5_1_14:21837875-21852161:-|nuORF;SUPT16H|p.K393Sfs*29|2|0.2|ENSG00000092201|chr14:21364882-21364882|T/-|frameshift_variant;SUPT16H|p.L305Cfs*9|1|0.16|ENSG00000092201|chr14:21368310-21368310|A/-|frameshift_variant;SUPT16H|p.S365Mfs*24|1|0.04|ENSG00000092201|chr14:21365096-21365097|-/A|frameshift_variant;SUPT16H|p.Y764Cfs*2|1|0.36|ENSG00000092201|chr14:21359493-21359494|AT/-|frameshift_variant	85.16082228582465	0.07850854922700509	4				NaN	NaN	0	NaN	9459	3518	12973
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12980	33.824	NaN	6785.8	30	0	534.55	0.035			+	15827	GWAGPVSSLSG	11	86	509.25359174869686	1016.4926305641937	2	509.25341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GWAGPVSSLSG_	REV__ENST00000401088.8_1_1:16722851-16723172:+|nuORF	47.657333605630114	0.4531673460382624	4				NaN	NaN	0	NaN	9460	3518	12973
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12990	33.844	NaN	43410	30	0	10378	0.214	+			4816	ATNTVYVFAK	10	92	557.2994380431063	1112.5843231530125	2	557.30078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATNTVYVFAK_	ENSG00000047315|ENST00000314595|POLR2B;POLR2B|p.A362Pfs*21|1|0.34|ENSG00000047315|chr4:57005423-57005423|A/-|frameshift_variant;POLR2B|p.K211Rfs*66|1|0.1|ENSG00000047315|chr4:56995302-56995302|A/-|frameshift_variant;POLR2B|p.N1030Sfs*23|1|0.07|ENSG00000047315|chr4:57025384-57025385|-/CT|frameshift_variant;POLR2B|p.P303Tfs*5|1|0.16|ENSG00000047315|chr4:57005248-57005249|-/A|frameshift_variant	191.44940797552337	8.906924887938949E-05	4				NaN	NaN	0	NaN	9467	3521	12989
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12991	33.848	NaN	8594.9	30	0	1721.8	0.106	+			49421	VVVAVGRAL	9	61	442.28948857851606	NaN	0	442.28961181640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVVAVGRAL_	ENSG00000167986|ENST00000301764|DDB1;ENST00000414411.3_1_11:61081295-61081943:-|nuORF	110.33723246496265	0.009392581423269769	4				NaN	NaN	0	NaN	9468	3521	12989
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12992	33.85	NaN	17305	30	0	1042.6	0.106	+			16284	HEGLVLTKL	9	94	505.30482199873626	1008.5950910642725	2	505.80645751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HEGLVLTKL_	ENSG00000149932|ENST00000279396|TMEM219	72.87924865735499	0.12833875048249987	4				NaN	NaN	0	NaN	9469	3521	12989
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12993	33.852	NaN	5389.9	30	0	573.19	0.106			+	37764	SLVPLIASLQ	10	74	520.8204070143846	1039.6262610955691	2	520.8212280273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLVPLIASLQ_	REV__ENSG00000182330|ENST00000357367|PRAMEF8;REV__ENSG00000204510|ENST00000697200|PRAMEF7	39.252832667884924	0.5560298534376815	4				NaN	NaN	0	NaN	9470	3521	12989
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12994	33.853	NaN	3926.8	30	0	298.04	0.106	+			17990	IHSDSNGLGIQ	11	73	570.7891595551981	NaN	0	570.7891235351562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IHSDSNGLGIQ_	ENSG00000188992|ENST00000681601|LIPI;LIPI|p.L306Ffs*6|1|0.35|ENSG00000188992|chr21:14165269-14165270|-/A|frameshift_variant;LIPI|p.L347Ffs*23|1|0.4|ENSG00000188992|chr21:14163447-14163448|-/A|frameshift_variant;nc|ENSG00000188992|Q6XZB0-2|LIPI;nc|ENSG00000188992|Q6XZB0-3|LIPI;nc|ENSG00000188992|Q6XZB0-4|LIPI;nc|ENSG00000188992|Q6XZB0-6|LIPI;nc|ENSG00000188992|Q6XZB0-7|LIPI;nc|ENSG00000188992|Q6XZB0-8|LIPI	41.42661286455405	0.376895999158515	4				NaN	NaN	0	NaN	9471	3521	12989
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12995	33.855	NaN	5961.3	30	0	907.32	0.036			+	25909	LSGLNEKGQL	10	73	529.7960915386174	NaN	0	529.7955932617188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSGLNEKGQL_	REV__ENST00000375151.4_1_X:54471110-54471305:+|nuORF	41.42661286455405	0.3598046802465243	4				NaN	NaN	0	NaN	9472	3521	12989
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12996	33.856	NaN	6220.3	30	0	866.9	0.141			+	46095	VDAQRQELN	9	76	536.7731956474576	NaN	0	536.7731323242188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VDAQRQELN_	REV__ENSG00000100139|ENST00000215957|MICALL1	51.19269402634007	0.19847346126499396	4				NaN	NaN	0	NaN	9473	3521	12989
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13009	33.884	NaN	8174.7	30	0	861.65	0.214	+			16285	HEGLVLTKL	9	78	505.30482199873626	1008.5950910642725	2	505.30560302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HEGLVLTKL_	ENSG00000149932|ENST00000279396|TMEM219	68.84614121027924	0.14577793175421136	4				NaN	NaN	0	NaN	9483	3524	13008
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13010	33.888	NaN	9029	30	0	1063.3	0.106	+			24139	LEKYKNIN	8	77	511.28655749283706	1020.5585620524741	2	511.2869567871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LEKYKNIN_	tr|U7SKK3|U7SKK3_FUSNUDUF4253domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02059PE=4SV=1	51.33545320467046	0.5859736979383976	4				NaN	NaN	0	NaN	9484	3524	13008
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13011	33.89	NaN	3555.5	30	0	595.82	0.106				-1	 	0	42	341.7154370966661	681.4163212601322	2	341.7159423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9485	3524	13008
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13012	33.892	NaN	6241.7	30	0	739.72	0.106			+	8263	EAGNILVMPI	10	79	528.7933257730568	1055.5720986129136	2	529.2971801757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EAGNILVMPI_	REV__ENSG00000077097|ENST00000264331|TOP2B;REV__ENSG00000131747|ENST00000423485|TOP2A;REV__nc|ENSG00000077097|Q02880-2|TOP2B;REV__nc|ENSG00000131747|P11388-2|TOP2A;REV__nc|ENSG00000131747|P11388-3|TOP2A;REV__nc|ENSG00000131747|P11388-4|TOP2A;REV__TOP2A|p.K1199Efs*11|1|0.23|ENSG00000131747|chr17:40396408-40396409|-/C|frameshift_variant;REV__TOP2A|p.T1205Hfs*19|4|0.35|ENSG00000131747|chr17:40396390-40396390|T/-|frameshift_variant;REV__TOP2B|p.S1441Kfs*20|1|0.32|ENSG00000077097|chr3:25606099-25606100|-/T|frameshift_variant;REV__TOP2B|p.S1441Vfs*41|4|0.13|ENSG00000077097|chr3:25606100-25606100|T/-|frameshift_variant;REV__TOP2B|p.S1476Ffs*11|2|0.3|ENSG00000077097|chr3:25604822-25604823|-/A|frameshift_variant	56.43379154798735	0.3982744522255666	4				NaN	NaN	0	NaN	9486	3524	13008
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13013	33.893	NaN	4086	30	0	400.3	0.106	+			25760	LSAGLGPGLL	10	66	449.2735743284604	896.5325957237209	2	449.2737121582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSAGLGPGLL_	ENSG00000135912|ENST00000392102|TTLL4;TTLL4|p.S144Kfs*71|1|0.21|ENSG00000135912|chr2:218738100-218738101|-/A|frameshift_variant	53.351449002276354	0.42630798468005626	4				NaN	NaN	0	NaN	9487	3524	13008
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13014	33.895	NaN	4522.2	30	0	296.78	0.037			+	8726	EEEMGLSNEE	10	74	583.7272747144326	1165.4399964956651	2	583.728271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EEEMGLSNEE_	REV__SCN5A|p.T1069M|1|0.31|ENSG00000183873|chr3:38580953-38580953|G/A|missense_variant	51.19269402634007	0.44601001148513897	4				NaN	NaN	0	NaN	9488	3524	13008
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13015	33.896	NaN	4593.8	30	0	475.16	0.141	+			36778	SIAPPVPLK	9	60	461.2915106637781	920.5684683943563	2	461.2920837402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SIAPPVPLK_	BUB1|p.V819Gfs*61|1|0.11|ENSG00000169679|chr2:110642126-110642127|-/C|frameshift_variant;ENSG00000169679|ENST00000302759|BUB1;ENST00000465029.5_1_2:111419157-111435602:-|nuORF;nc|ENSG00000169679|O43683-2|BUB1;nc|ENSG00000169679|O43683-3|BUB1	51.33545320467046	0.2872990594074956	4				NaN	NaN	0	NaN	9489	3524	13008
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13030	33.928	NaN	179340	30	0	59497	0.21			+	-1	SRPREKKGK	9	102	564.3363310335735	1126.658109133947	2	564.3372802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SRPREKKGK_	REV__ENSG00000186468|ENST00000296674|RPS23;REV__ENST00000429775.2_1_X:70182861-70183140:+|nuORF;REV__ENST00000491662.1_1_8:98877671-98877710:+|nuORF	47.657333605630114	0.33044192980041115	4				NaN	NaN	0	NaN	9501	3527	13029
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13031	33.932	NaN	24123	30	0	4793.7	0.106	+			36870	SIFSKFTSK	9	87	522.7894133187915	1043.564273704383	2	522.7900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SIFSKFTSK_	ENSG00000072518|ENST00000402010|MARK2;nc|ENSG00000072518|Q7KZI7-10|MARK2;nc|ENSG00000072518|Q7KZI7-11|MARK2;nc|ENSG00000072518|Q7KZI7-12|MARK2;nc|ENSG00000072518|Q7KZI7-13|MARK2;nc|ENSG00000072518|Q7KZI7-14|MARK2;nc|ENSG00000072518|Q7KZI7-15|MARK2;nc|ENSG00000072518|Q7KZI7-16|MARK2;nc|ENSG00000072518|Q7KZI7-2|MARK2;nc|ENSG00000072518|Q7KZI7-3|MARK2;nc|ENSG00000072518|Q7KZI7-4|MARK2;nc|ENSG00000072518|Q7KZI7-5|MARK2;nc|ENSG00000072518|Q7KZI7-6|MARK2;nc|ENSG00000072518|Q7KZI7-7|MARK2;nc|ENSG00000072518|Q7KZI7-8|MARK2;nc|ENSG00000072518|Q7KZI7-9|MARK2	96.66504779109242	0.04607440320619715	4				NaN	NaN	0	NaN	9502	3527	13029
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13032	33.934	NaN	18225	30	0	4746.9	0.106				-1	AKCKMDMTV	9	80	558.2483298903677	1114.4821068475353	2	558.2490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),2 Oxidation (M)	_AKC(Carbamidomethyl (C))KM(Oxidation (M))DM(Oxidation (M))TV_	ASTN1|p.T567M|1|0.29|ENSG00000152092|chr1:176958381-176958381|G/A|missense_variant	66.42927471994793	0.16001998865088202	4				NaN	NaN	0	NaN	9503	3527	13029
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13033	33.936	NaN	19245	30	0	2831.6	0.106	+			17804	IEVENKEVL	9	75	536.7984219399792	NaN	0	536.7984619140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IEVENKEVL_	ENSG00000173193|ENST00000474629|PARP14;nc|ENSG00000173193|Q460N5-1|PARP14;nc|ENSG00000173193|Q460N5-3|PARP14;nc|ENSG00000173193|Q460N5-4|PARP14;PARP14|p.N1416Efs*19|1|0.2|ENSG00000173193|chr3:122718388-122718389|-/A|frameshift_variant	122.93914200107957	0.0016770443082379867	4				NaN	NaN	0	NaN	9504	3527	13029
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13034	33.938	NaN	8910.3	30	0	928.75	0.106	+			12451	GEDEPLHAL	9	72	490.7375763880536	979.4605998429072	2	490.7374572753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GEDEPLHAL_	ENSG00000168066|ENST00000377390|SF1;nc|ENSG00000168066|Q15637-2|SF1;nc|ENSG00000168066|Q15637-3|SF1;nc|ENSG00000168066|Q15637-4|SF1;nc|ENSG00000168066|Q15637-5|SF1;nc|ENSG00000168066|Q15637-6|SF1;nc|ENSG00000168066|Q15637-7|SF1;SF1|p.V573Sfs*23|1|0.22|ENSG00000168066|chr11:64766025-64766025|G/-|frameshift_variant	106.41520541750704	0.03265588207292361	4				NaN	NaN	0	NaN	9505	3527	13029
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13035	33.939	NaN	4252.6	30	0	913.4	0.035				-1	 	0	47	336.53376358563514	1006.5794613571054	3	336.53411865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9506	3527	13029
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13036	33.94	NaN	3236.1	30	0	1604.8	0.141				-1	MNRQRVPK	8	45	348.8618195480873	1043.563629244462	3	348.862060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_M(Oxidation (M))NRQRVPK_	EFHC1|p.D408Rfs*4|1|0.32|ENSG00000096093|chr6:52469409-52469410|-/A|frameshift_variant;EFHC1|p.D408Tfs*7|6|0.29|ENSG00000096093|chr6:52469410-52469410|A/-|frameshift_variant;EFHC1|p.S488Vfs*8|1|0.09|ENSG00000096093|chr6:52479216-52479216|C/-|frameshift_variant;ENSG00000096093|ENST00000371068|EFHC1;nc|ENSG00000096093|Q5JVL4-3|EFHC1	29.14955571784316	0.7342621283720113	4				NaN	NaN	0	NaN	9507	3527	13029
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13052	33.974	NaN	33486	30	0	6102.8	0.214	+			20819	KIFSGVFVK	9	88	512.8127309198235	1023.610908906447	2	512.813232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KIFSGVFVK_	ENSG00000146223|ENST00000493763|RPL7L1;ENST00000397415.7_1_6:42848808-42854199:+|nuORF;ENST00000462348.1_1_6:42848614-42854030:+|nuORF;ENST00000530523.1_1_8:42580956-42581139:-|nuORF;nc|ENSG00000146223|Q6DKI1-2|RPL7L1;RPL7L1|p.Q126Pfs*38|1|0.24|ENSG00000146223|chr6:42884698-42884699|-/C|frameshift_variant	104.01359247289065	0.03510646158778409	4				NaN	NaN	0	NaN	9520	3530	13051
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13053	33.978	NaN	39118	30	0	11958	0.106	+			48672	VTSTFIIEK	9	90	519.2971177189776	1036.579682504755	2	519.2976684570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTSTFIIEK_	ENSG00000126561|ENST00000590949|STAT5A;ENSG00000173757|ENST00000293328|STAT5B;ENST00000468312.1_1_17:40370167-40384145:-|nuORF;nc|ENSG00000126561|P42229-2|STAT5A;STAT5B|p.H584Tfs*8|3|0.33|ENSG00000173757|chr17:42210428-42210429|-/T|frameshift_variant;STAT5B|p.K583Nfs*16|2|0.34|ENSG00000173757|chr17:42210429-42210429|T/-|frameshift_variant	106.68306549817024	0.032382560583716295	4				NaN	NaN	0	NaN	9521	3530	13051
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13054	33.98	NaN	8133.4	30	0	1550.2	0.106	+			30001	PPITISSK	8	69	421.752488875929	841.490424818658	2	421.7527160644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PPITISSK_	ENSG00000104722|ENST00000221166|NEFM;nc|ENSG00000104722|P07197-2|NEFM;NEFM|p.G845Vfs*10|1|0.22|ENSG00000104722|chr8:24918384-24918384|G/-|frameshift_variant;NEFM|p.I861Nfs*4|1|0.3|ENSG00000104722|chr8:24918430-24918431|-/A|frameshift_variant;NEFM|p.K721Rfs*18|1|0.25|ENSG00000104722|chr8:24918013-24918013|A/-|frameshift_variant;NEFM|p.K843Nfs*4|1|0.11|ENSG00000104722|chr8:24918383-24918384|-/T|frameshift_variant	124.59426212874841	0.22798698790419603	4				NaN	NaN	0	NaN	9522	3530	13051
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13055	33.982	NaN	6966.5	30	0	2429.9	0.106	+			32619	QYNPKFQTL	9	74	569.7968591357502	1137.5791653383003	2	569.7979125976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QYNPKFQTL_	ENSG00000116580|ENST00000368331|GON4L;ENSG00000163374|ENST00000355499|YY1AP1;ENST00000436865.5_1_1:155629450-155649007:-|nuORF;ENST00000496324.5_1_1:155642327-155650230:-|nuORF;GON4L|p.E1831Rfs*8|1|0.18|ENSG00000116580|chr1:155756984-155756985|-/T|frameshift_variant;GON4L|p.P1077Lfs*24|1|0.34|ENSG00000116580|chr1:155766243-155766243|G/-|frameshift_variant;nc|ENSG00000116580|Q3T8J9-2|GON4L;nc|ENSG00000116580|Q3T8J9-3|GON4L;nc|ENSG00000163374|Q9H869-3|YY1AP1;nc|ENSG00000163374|Q9H869-4|YY1AP1;nc|ENSG00000163374|Q9H869-5|YY1AP1;nc|ENSG00000163374|Q9H869-6|YY1AP1;nc|ENSG00000163374|Q9H869-8|YY1AP1;nc|ENSG00000163374|Q9H869-9|YY1AP1;nc|ENSG00000163374|Q9H869|YY1AP1	74.25504064058377	0.12238981753128622	4				NaN	NaN	0	NaN	9523	3530	13051
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13056	33.983	NaN	13499	30	0	1186.6	0.106	+			44104	TPVGLIVSH	9	79	461.7704555949432	921.5263582566864	2	461.77142333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TPVGLIVSH_	ENSG00000136718|ENST00000259239|IMP4;ENST00000460766.5_1_2:131100637-131104038:+|nuORF	104.74654710444128	0.034358562718640136	4				NaN	NaN	0	NaN	9524	3530	13051
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13057	33.985	NaN	7376.3	30	0	1460.5	0.037	+			47345	VPDSSGPERIL	11	83	585.31130399882	1168.60805506444	2	585.3120727539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VPDSSGPERIL_	ENSG00000165119|ENST00000376263|HNRNPK;nc|ENSG00000165119|P61978-3|HNRNPK;nc|ENSG00000165119|P61978|HNRNPK	75.65223720490533	0.18861880313260296	4				NaN	NaN	0	NaN	9525	3530	13051
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13058	33.986	NaN	7026	30	0	476.41	0.142	+			45647	TYSPALNKMF	10	78	594.2909243557704	1186.5672957783406	2	594.2924194335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_TYSPALNKM(Oxidation (M))F_	ENSG00000141510|ENST00000269305|TP53;ENST00000505014.5_1_17:7578140-7579834:-|nuORF;nc|ENSG00000141510|P04637-2|TP53;nc|ENSG00000141510|P04637-3|TP53;nc|ENSG00000141510|P04637-4|TP53;nc|ENSG00000141510|P04637-5|TP53;nc|ENSG00000141510|P04637-6|TP53;TP53|p.C124G|1|0.84|ENSG00000141510|chr17:7675999-7675999|A/C|missense_variant;TP53|p.C135Y|1|0.64|ENSG00000141510|chr17:7675208-7675208|C/T|missense_variant;TP53|p.C229Yfs*10|1|0.59|ENSG00000141510|chr17:7674276-7674277|AC/-|frameshift_variant;TP53|p.C242Afs*5|1|0.54|ENSG00000141510|chr17:7674240-7674240|G/-|frameshift_variant;TP53|p.E198Gfs*11|1|0.43|ENSG00000141510|chr17:7674938-7674939|-/C|frameshift_variant;TP53|p.E336Sfs*9|1|0.15|ENSG00000141510|chr17:7670704-7670704|A/-|frameshift_variant;TP53|p.G302Rfs*4|1|0.13|ENSG00000141510|chr17:7673717-7673718|-/G|frameshift_variant;TP53|p.H178Tfs*69|1|0.68|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant;TP53|p.I195Nfs*14|1|0.81|ENSG00000141510|chr17:7674947-7674948|-/T|frameshift_variant;TP53|p.P151Rfs*27|1|0.46|ENSG00000141510|chr17:7675153-7675160|GGGCGGGG/-|frameshift_variant;TP53|p.P153Afs*28|1|0.62|ENSG00000141510|chr17:7675156-7675157|-/G|frameshift_variant;TP53|p.P301Qfs*44|1|0.5|ENSG00000141510|chr17:7673718-7673718|G/-|frameshift_variant;TP53|p.P322Hfs*23|1|0.53|ENSG00000141510|chr17:7673563-7673563|G/-|frameshift_variant;TP53|p.Q331Sfs*6|1|0.66|ENSG00000141510|chr17:7673537-7673538|-/A|frameshift_variant;TP53|p.R280Kfs*59|1|0.41|ENSG00000141510|chr17:7673763-7673781|TCCTCTGTGCGCCGGTCTC/-|frameshift_variant;TP53|p.R290Kfs*53|1|0.62|ENSG00000141510|chr17:7673747-7673753|CTTGCGG/-|frameshift_variant;TP53|p.R335Lfs*10|1|0.74|ENSG00000141510|chr17:7670705-7670705|C/-|frameshift_variant	93.1432384553994	0.11307820852620741	4				NaN	NaN	0	NaN	9526	3530	13051
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13075	34.022	NaN	494210	30	0	75296	0.08	+			36045	SEISNIARV	9	112	494.7747719972049	987.5349910612098	2	494.77471923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEISNIARV_	ENSG00000016490|ENST00000394711|CLCA1	141.52041321563706	0.009766778904176347	4				NaN	NaN	0	NaN	9540	3533	13074
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13076	34.023	NaN	168890	30	0	49724	0.106	+			5816	AVIGADSVTLK	11	83	537.3133128169269	1072.6120727006537	2	537.3141479492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVIGADSVTLK_	ENSG00000108651|ENST00000261708|UTP6;ENST00000477860.1_1_17:30200326-30200766:-|nuORF	121.28727682496555	0.0177064336051218	4				NaN	NaN	0	NaN	9541	3533	13074
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13077	34.025	NaN	35496	30	0	2308.1	0.106	+			26245	LSSRSAVLLV	10	100	522.8237082825586	1043.6328636319172	2	522.82470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSSRSAVLLV_	ENST00000406197.5_2_7:155266987-155295794:-|nuORF	68.78682469695295	0.28723163847957256	4				NaN	NaN	0	NaN	9542	3533	13074
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13078	34.027	NaN	15041	30	0	2567.5	0.106			+	8728	EEEPPEQLF	9	82	559.2565080475191	NaN	0	559.25830078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EEEPPEQLF_	REV__ENSG00000196990|ENST00000673969|FAM163B	44.116797842482775	0.2472372736944149	4				NaN	NaN	0	NaN	9543	3533	13074
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13079	34.029	NaN	10447	30	0	1123.3	0.106			+	11762	FSKIDLSASQ	10	72	548.2878989136655	1094.5612448941308	2	548.2943725585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FSKIDLSASQ_	REV__ENSG00000129657|ENST00000436233|SEC14L1;REV__nc|ENSG00000129657|Q92503-2|SEC14L1;REV__nc|ENSG00000129657|Q92503-3|SEC14L1;REV__SEC14L1|p.G159Efs*12|1|0.17|ENSG00000129657|chr17:77193544-77193544|A/-|frameshift_variant;REV__SEC14L1|p.I147Lfs*3|1|0.38|ENSG00000129657|chr17:77193509-77193509|A/-|frameshift_variant	70.8162118820467	0.27065172005956	4				NaN	NaN	0	NaN	9544	3533	13074
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13080	34.03	NaN	12925	30	0	2255.8	0.106	+			35350	SAPGQPPAAM	10	64	463.7232112264379	925.4318695196758	2	463.72344970703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SAPGQPPAAM_	ENST00000462770.5_1_3:133661447-133748739:-|nuORF;ENST00000464676.5_1_3:133698382-133748739:-|nuORF	45.97224482568171	0.49411383603842696	4				NaN	NaN	0	NaN	9545	3533	13074
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13081	34.032	NaN	6131.4	30	0	963.16	0.106	+			4791	ATNKITIIFK	10	77	574.8549558276328	1147.6953587220655	2	574.8560791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATNKITIIFK_	ENSG00000174136|ENST00000513185|RGMB;RGMB|p.E393Gfs*29|1|0.64|ENSG00000174136|chr5:98793614-98793615|-/G|frameshift_variant	84.31045756130733	0.1636476603981187	4				NaN	NaN	0	NaN	9546	3533	13074
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13082	34.034	NaN	11819	30	0	2131.2	0.037	+			4792	ATNKITIIFK	10	72	383.572467240843	1147.695572322729	3	383.9073181152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_ATNKITIIFK_	ENSG00000174136|ENST00000513185|RGMB;RGMB|p.E393Gfs*29|1|0.64|ENSG00000174136|chr5:98793614-98793615|-/G|frameshift_variant	80.91624569148213	0.18813531420570515	4				NaN	NaN	0	NaN	9547	3533	13074
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13100	34.07	NaN	11693	30	0	3678.6	0.214	+			23969	LDTPRQAA	8	65	436.23482501556606	870.4550970979321	2	436.2352294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LDTPRQAA_	ENSG00000101624|ENST00000262127|CEP76;ENST00000590143.5_1_18:12662154-12700964:-|nuORF;nc|ENSG00000101624|Q8TAP6-2|CEP76;nc|ENSG00000101624|Q8TAP6-3|CEP76	60.29395666154354	0.49887135096048313	4				NaN	NaN	0	NaN	9562	3536	13099
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13101	34.074	NaN	18271	30	0	2876.2	0.106	+			15894	HAAGFAYTY	9	76	500.7312284274892	NaN	0	500.73016357421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HAAGFAYTY_	ENSG00000166801|ENST00000675163|FAM111A	47.91560031466742	0.22105767942158736	4				NaN	NaN	0	NaN	9563	3536	13099
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13102	34.076	NaN	19035	30	0	1772.8	0.106	+			42338	TAGRVLEL	8	83	429.7553728958775	857.496192858555	2	429.75592041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TAGRVLEL_	CPSF2|p.I552Sfs*5|1|0.38|ENSG00000165934|chr14:92157711-92157711|A/-|frameshift_variant;ENSG00000165934|ENST00000298875|CPSF2	49.536043120802724	0.597139409391072	4				NaN	NaN	0	NaN	9564	3536	13099
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13103	34.078	NaN	13548	30	0	2067.9	0.106			+	48311	VTEQPRQL	8	70	485.7704584312641	969.5263639293282	2	485.7694091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTEQPRQL_	REV__ENSG00000130396|ENST00000683244|AFDN;REV__nc|ENSG00000130396|P55196-1|AFDN;REV__nc|ENSG00000130396|P55196-2|AFDN;REV__nc|ENSG00000130396|P55196-3|AFDN;REV__nc|ENSG00000130396|P55196-5|AFDN;REV__nc|ENSG00000130396|P55196-6|AFDN;REV__nc|ENSG00000130396|P55196|AFDN	68.78682469695295	0.41700713582915416	4				NaN	NaN	0	NaN	9565	3536	13099
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13104	34.079	NaN	7426.5	30	0	728.87	0.106	+			27690	MPVGMTHGL	9	79	471.7297824504232	941.4450119676465	2	471.7303771972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MPVGMTHGL_	ENSG00000092203|ENST00000448790|TOX4;nc|ENSG00000092203|O94842-2|TOX4;TOX4|p.G159Vfs*126|1|0.32|ENSG00000092203|chr14:21488743-21488743|G/-|frameshift_variant;TOX4|p.Q486Hfs*16|1|0.55|ENSG00000092203|chr14:21493073-21493073|A/-|frameshift_variant;TOX4|p.T456Dfs*60|1|0.38|ENSG00000092203|chr14:21492975-21492976|-/C|frameshift_variant	63.30626980617807	0.18605348971131092	4				NaN	NaN	0	NaN	9566	3536	13099
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13105	34.081	NaN	8082.9	30	0	632.29	0.034				-1	SMVPPLAIM	9	71	487.7562771779516	973.4980014227032	2	487.7569885253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_SMVPPLAIM(Oxidation (M))_	ENSG00000187391|ENST00000354212|MAGI2;ENST00000520379.2_1_7:77814916-78119132:-|nuORF;MAGI2|p.D644Vfs*8|1|0.05|ENSG00000187391|chr7:78256059-78256060|-/AAGACAAACA|frameshift_variant;MAGI2|p.P1095Rfs*80|1|0.48|ENSG00000187391|chr7:78127336-78127336|G/-|frameshift_variant;nc|ENSG00000187391|Q86UL8-2|MAGI2	50.0245360154114	0.3026755932229825	4				NaN	NaN	0	NaN	9567	3536	13099
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13106	34.082	NaN	9845.2	30	0	3488.2	0.14				-1	ASGQFVNKL	9	82	503.27166354034347	1004.528774147487	2	503.27178955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))ASGQFVNKL_	ENSG00000204616|ENST00000376734|TRIM31;nc|ENSG00000204616|Q9BZY9-2|TRIM31	54.776311868738084	0.25715957988447635	4				NaN	NaN	0	NaN	9568	3536	13099
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13121	34.114	NaN	67525	30	0	45351	0.214				-1	 	0	61	339.21426172417694	1014.6209557727309	3	339.21484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9580	3539	13120
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13122	34.118	NaN	31691	30	0	3986.2	0.106	+			29172	NVIRDAVTY	9	89	525.781766082046	1049.548979230892	2	525.783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NVIRDAVTY_	ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2	82.7504851949679	0.08565546331141553	4				NaN	NaN	0	NaN	9581	3539	13120
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13123	34.12	NaN	37559	30	0	8360.9	0.106	+			5989	AVLSWKLAK	9	91	508.31796838964203	1014.6213838460841	2	508.3189392089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVLSWKLAK_	ENSG00000188725|ENST00000339020|SMIM15;SMIM15|p.M47T|1|0.4|ENSG00000188725|chr5:61160032-61160032|A/G|missense_variant	167.22876102047192	0.0032399547248545047	4				NaN	NaN	0	NaN	9582	3539	13120
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13124	34.122	NaN	25481	30	0	5727.3	0.106				-1	 	0	81	542.3233155229968	1082.6320781127936	2	542.3246459960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9583	3539	13120
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13125	34.124	NaN	64548	30	0	10453	0.106				-1	 	0	89	450.7498849722781	899.4852170113562	2	450.75048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9584	3539	13120
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13126	34.125	NaN	30384	30	0	7899.2	0.035				-1	 	0	88	500.2658882263678	998.5172235195356	2	500.2666320800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9585	3539	13120
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13127	34.126	NaN	21444	30	0	6418.2	0.14	+			1284	AESKNGWTL	9	82	503.25303709269366	1004.4915212521873	2	503.25360107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AESKNGWTL_	ENSG00000110048|ENST00000263847|OSBP	109.47833844074708	0.029530294723441826	4				NaN	NaN	0	NaN	9586	3539	13120
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13140	34.155	NaN	24923	30	0	3683.7	0.215	+			12503	GEEKLIASV	9	83	473.26573061504916	944.5169082968984	2	473.265869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEEKLIASV_	ENSG00000130713|ENST00000372358|EXOSC2;ENST00000430138.6_1_9:133569178-133570981:+|nuORF;ENST00000463488.1_1_9:133569202-133574940:+|nuORF;ENST00000491115.6_1_9:133569178-133574746:+|nuORF;nc|ENSG00000130713|Q13868-2|EXOSC2;nc|ENSG00000130713|Q13868-3|EXOSC2	109.47833844074708	0.029530294723441826	4				NaN	NaN	0	NaN	9596	3542	13139
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13141	34.159	NaN	8003.3	30	0	1432	0.106				-1	 	0	63	423.265419432173	844.5162859311461	2	423.2657470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9597	3542	13139
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13142	34.16	NaN	11900	30	0	1334.2	0.106	+			483	AAYDSLVVGK	10	79	511.7797019386125	NaN	0	511.7794494628906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AAYDSLVVGK_	ENSG00000128283|ENST00000249014|CDC42EP1;nc|ENSG00000128283|Q00587-2|CDC42EP1	78.26377905018397	0.10800580676963668	4				NaN	NaN	0	NaN	9598	3542	13139
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13143	34.162	NaN	4753.7	30	0	1337.1	0.106				-1	 	0	59	329.21782158317654	984.6316353497297	3	329.2182922363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9599	3542	13139
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13144	34.164	NaN	13147	30	0	1073.1	0.106	+			6686	AYVHMVTHF	9	78	552.7677574953982	1103.5209620575963	2	552.7687377929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AYVHMVTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	163.84426431716093	0.003817671866125946	4				NaN	NaN	0	NaN	9600	3542	13139
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13145	34.166	NaN	6557.4	30	0	723.84	0.106			+	18591	ISQELVQI	8	79	465.2688911057447	928.5232292782894	2	465.2685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ISQELVQI_	REV__ENSG00000099260|ENST00000263174|PALMD;REV__ENST00000605613.1_1_1:100133206-100133335:+|nuORF	74.25504064058377	0.37144338840759816	4				NaN	NaN	0	NaN	9601	3542	13139
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13146	34.168	NaN	9664.4	30	0	1287.5	0.035	+			50629	YEAVREVL	8	68	489.7659932575951	977.5174335819902	2	489.76611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YEAVREVL_	ENSG00000198755|ENST00000322203|RPL10A;ENST00000464112.5_1_6:35436546-35438524:+|nuORF;ENST00000467020.5_1_6:35436211-35436817:+|nuORF;ENST00000472730.1_1_3:61728131-61728755:-|nuORF;ENST00000490335.4_1_6:35436211-35436651:+|nuORF;RPL10A|p.P135Lfs*17|1|0.35|ENSG00000198755|chr6:35470270-35470270|C/-|frameshift_variant	75.04331003522576	0.3648751570195447	4				NaN	NaN	0	NaN	9602	3542	13139
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13159	34.195	NaN	640740	30	0	66900	0.149	+			39647	STIEYVIQR	9	101	554.8024455135477	1107.5903380938953	2	554.8033447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STIEYVIQR_	ENSG00000101310|ENST00000650089|SEC23B	237.81334533030096	1.004045517924065E-13	4				NaN	NaN	0	NaN	9612	3545	13158
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13160	34.197	NaN	5792.3	30	0	707.47	0.106				-1	CAVLWVLV	8	70	480.2738183618943	958.5330837905886	2	480.2738952636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_C(Carbamidomethyl (C))AVLWVLV_	ENSG00000178623|ENST00000407714|GPR35;GPR35|p.V136M|1|0.59|ENSG00000178623|chr2:240630358-240630358|G/A|missense_variant;nc|ENSG00000178623|Q9HC97-2|GPR35	54.89457262308372	0.5523244765420926	4				NaN	NaN	0	NaN	9613	3545	13158
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13161	34.199	NaN	9715.4	30	0	1768.7	0.106	+			4327	ATGLPISMK	9	79	459.25959056797905	916.5046282027581	2	459.2597351074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATGLPISMK_	CD40LG|p.I33Sfs*4|1|0.75|ENSG00000102245|chrX:136648337-136648337|T/-|frameshift_variant;ENSG00000102245|ENST00000370629|CD40LG	75.04331003522576	0.118981335847003	4				NaN	NaN	0	NaN	9614	3545	13158
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13162	34.201	NaN	9166.8	30	0	1558.3	0.106				-1	 	0	84	454.2652913611327	906.5160297890654	2	454.26556396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9615	3545	13158
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13163	34.203	NaN	11227	30	0	1369	0.106	+			48269	VTDINLGKL	9	77	486.7912534615059	971.5679539898118	2	486.7904968261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTDINLGKL_	ENSG00000120254|ENST00000367321|MTHFD1L;MTHFD1L|p.I587*|1|0.1|ENSG00000120254|chr6:150956023-150956023|A/-|frameshift_variant;nc|ENSG00000120254|Q6UB35-2|MTHFD1L	65.46538089061403	0.16805504838372562	4				NaN	NaN	0	NaN	9616	3545	13158
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13164	34.205	NaN	7289.2	30	0	436.89	0.106			+	48928	VVDSNDIYY	9	83	544.2503233044737	1086.4860936757473	2	544.2560424804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VVDSNDIYY_	REV__tr|U7SRG6|U7SRG6_FUSNULong-chainacyl-CoAsynthetaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01594PE=4SV=1	51.33545320467046	0.2872990594074956	4				NaN	NaN	0	NaN	9617	3545	13158
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13165	34.207	NaN	5046.2	30	0	385.04	0.038	+			42069	SYASLQQNKW	10	79	612.8037010151544	1223.5928490971087	2	612.8045654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SYASLQQNKW_	ENSG00000104133|ENST00000261866|SPG11;nc|ENSG00000104133|Q96JI7-2|SPG11;nc|ENSG00000104133|Q96JI7-3|SPG11;SPG11|p.L950Wfs*13|2|0.21|ENSG00000104133|chr15:44615552-44615552|A/-|frameshift_variant	101.45984612302182	0.07336148045341315	4				NaN	NaN	0	NaN	9618	3545	13158
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13179	34.235	NaN	106720	30	0	18331	0.195	+			36318	SESLPVRTL	9	98	501.284452883748	1000.554352834296	2	501.28436279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SESLPVRTL_	ENSG00000075420|ENST00000415807|FNDC3B;FNDC3B|p.T1056Hfs*16|1|0.43|ENSG00000075420|chr3:172378419-172378420|-/C|frameshift_variant	114.8945686534367	0.024290463251177924	4				NaN	NaN	0	NaN	9629	3548	13178
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13180	34.238	NaN	21249	30	0	3429.9	0.106			+	33531	RLAAVAEL	8	71	421.75712176757315	841.4996906019463	2	421.75787353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RLAAVAEL_	REV__ENST00000481869.1_1_1:934427-935027:-|nuORF	55.50420428727701	0.5462892107279674	4				NaN	NaN	0	NaN	9630	3548	13178
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13181	34.24	NaN	17580	30	0	2484.9	0.106	+			26021	LSLEGKPL	8	72	428.7616352222481	855.5087175112963	2	428.7604064941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSLEGKPL_	ENSG00000154783|ENST00000285046|FGD5;FGD5|p.D818*|1|0.19|ENSG00000154783|chr3:14821521-14821522|-/C|frameshift_variant;FGD5|p.T1238Pfs*9|1|0.25|ENSG00000154783|chr3:14922447-14922447|C/-|frameshift_variant	125.81401957644128	0.2262431007506538	4				NaN	NaN	0	NaN	9631	3548	13178
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13182	34.242	NaN	20358	30	0	3332.7	0.106	+			3046	ASFILGTGK	9	76	447.25781492743306	892.5010769216661	2	447.25762939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASFILGTGK_	CDCA2|p.N847Mfs*14|1|0.15|ENSG00000184661|chr8:25507200-25507200|A/-|frameshift_variant;ENSG00000184661|ENST00000330560|CDCA2;nc|ENSG00000184661|Q69YH5-2|CDCA2	104.01359247289065	0.03510646158778409	4				NaN	NaN	0	NaN	9632	3548	13178
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13183	34.244	NaN	16754	30	0	4305.2	0.106	+			18640	ISTNLKIP	8	77	443.2735276359465	884.532502338693	2	443.27337646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ISTNLKIP_	nc|ENSG00000237621|Q8NGU1|OR9A1P	101.60071028292904	0.24979566554663588	4				NaN	NaN	0	NaN	9633	3548	13178
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13184	34.246	NaN	9996.6	30	0	1662	0.106	+			37415	SLGLQPWIG	9	70	485.7704584312641	969.5263639293282	2	486.273193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLGLQPWIG_	nc|ENSG00000153487|Q9UK53|ING1	50.0245360154114	0.3026755932229825	4				NaN	NaN	0	NaN	9634	3548	13178
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13185	34.248	NaN	6328.6	30	0	373.31	0.035	+			826	AEGEIYTKL	9	73	512.2734407508228	NaN	0	512.2726440429688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AEGEIYTKL_	ENSG00000138190|ENST00000260762|EXOC6;EXOC6|p.L640Ffs*39|1|0.37|ENSG00000138190|chr10:92974192-92974193|-/T|frameshift_variant;nc|ENSG00000138190|Q8TAG9-2|EXOC6	54.722347961057174	0.17414871455573902	4				NaN	NaN	0	NaN	9635	3548	13178
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13203	34.284	NaN	91579	30	0	29445	0.2			+	38360	SRPREKKGK	9	86	564.3363310335735	1126.658109133947	2	564.3375854492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SRPREKKGK_	REV__ENSG00000186468|ENST00000296674|RPS23;REV__ENST00000429775.2_1_X:70182861-70183140:+|nuORF;REV__ENST00000491662.1_1_8:98877671-98877710:+|nuORF	49.536043120802724	0.308405419312776	4				NaN	NaN	0	NaN	9650	3551	13202
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13204	34.287	NaN	31931	30	0	3916.3	0.106				-1	 	0	92	508.27343442025904	507.26615795365905	1	508.2743225097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9651	3551	13202
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13205	34.289	NaN	19022	30	0	1234.7	0.106	+			13863	GQWKKGFVL	9	92	531.8081529780382	1061.6017530228762	2	531.8093872070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GQWKKGFVL_	ENSG00000142864|ENST00000361219|SERBP1;ENST00000484880.1_1_1:67885652-67890638:-|nuORF;nc|ENSG00000142864|Q8NC51-2|SERBP1;nc|ENSG00000142864|Q8NC51-4|SERBP1;nc|ENSG00000142864|Q8NC51|SERBP1	58.78195531508484	0.22376836668196862	4				NaN	NaN	0	NaN	9652	3551	13202
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13206	34.291	NaN	13279	30	0	1747.2	0.106	+			36469	SEVQDRVML	9	81	538.7733367032299	1075.5321204732597	2	538.7742309570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SEVQDRVML_	ENSG00000119801|ENST00000261353|YPEL5	90.60085204095205	0.06317133949006545	4				NaN	NaN	0	NaN	9653	3551	13202
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13207	34.293	NaN	17967	30	0	2032.3	0.106			+	42045	SWLWRVSTC	9	87	569.2769349354203	1136.5393169376405	2	569.2775268554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SWLWRVSTC_	REV__POR|p.I444Sfs*101|1|0.44|ENSG00000127948|chr7:75985133-75985133|C/-|frameshift_variant	51.33545320467046	0.2872990594074956	4				NaN	NaN	0	NaN	9654	3551	13202
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13208	34.295	NaN	12383	30	0	793.53	0.106	+			35782	SEAEKVYIV	9	81	519.2794260043194	1036.5442990754386	2	519.2805786132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SEAEKVYIV_	ENSG00000075914|ENST00000265564|EXOSC7	56.43379154798735	0.2433427591689151	4				NaN	NaN	0	NaN	9655	3551	13202
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13209	34.297	NaN	7610	30	0	1668.4	0.036			+	8561	EAVYSEPGTY	10	76	558.2483298903677	1114.4821068475353	2	558.2496948242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EAVYSEPGTY_	REV__ENSG00000150995|ENST00000649015|ITPR1;REV__ENST00000493491.5_1_3:4841632-4887906:+|nuORF;REV__nc|ENSG00000150995|Q14643-2|ITPR1;REV__nc|ENSG00000150995|Q14643-3|ITPR1;REV__nc|ENSG00000150995|Q14643-4|ITPR1;REV__nc|ENSG00000150995|Q14643-5|ITPR1;REV__nc|ENSG00000150995|Q14643-6|ITPR1;REV__nc|ENSG00000150995|Q14643-7|ITPR1;REV__nc|ENSG00000150995|Q14643-8|ITPR1	34.172542307311794	0.6007644933930345	4				NaN	NaN	0	NaN	9656	3551	13202
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13218	34.317	NaN	22348	30	0	4933	0.214	+			42874	TEGYQPPPV	9	78	494.2425366336347	986.4705203340694	2	494.2430114746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEGYQPPPV_	ENSG00000108639|ENST00000225777|SYNGR2;ENST00000592456.1_1_17:76167504-76168014:+|nuORF	72.87924865735499	0.12833875048249987	4				NaN	NaN	0	NaN	9662	3554	13217
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13219	34.32	NaN	18081	30	0	1616.3	0.106	+			46283	VEIAEKNVL	9	83	507.7953114190283	NaN	0	507.79534912109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VEIAEKNVL_	AKAP9|p.Q3083Nfs*28|1|0.15|ENSG00000127914|chr7:92089389-92089390|-/TGAATATCAAGCAGCTATGGAATGCC|frameshift_variant;ENSG00000127914|ENST00000356239|AKAP9;nc|ENSG00000127914|Q99996-1|AKAP9;nc|ENSG00000127914|Q99996-3|AKAP9;nc|ENSG00000127914|Q99996-5|AKAP9;nc|ENSG00000127914|Q99996-6|AKAP9	56.43379154798735	0.16452882468284893	4				NaN	NaN	0	NaN	9663	3554	13217
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13220	34.322	NaN	19041	30	0	2949.8	0.106	+			47880	VSLGTPIMK	9	85	473.2749957443418	944.5354385554837	2	473.2754821777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSLGTPIMK_	ECT2|p.K832Rfs*25|1|0.1|ENSG00000114346|chr3:172815693-172815693|A/-|frameshift_variant;ENSG00000114346|ENST00000392692|ECT2;nc|ENSG00000114346|Q9H8V3-2|ECT2;nc|ENSG00000114346|Q9H8V3-3|ECT2;nc|ENSG00000114346|Q9H8V3-4|ECT2	67.49366992349736	0.1516260258713357	4				NaN	NaN	0	NaN	9664	3554	13217
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13221	34.324	NaN	7335.6	30	0	507.19	0.106	+			41287	SVLLFVTKK	9	75	517.8336938499632	1033.6528347667263	2	517.8343505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVLLFVTKK_	ENSG00000198231|ENST00000389924|DDX42;ENST00000578593.1_1_17:61889231-61895755:+|nuORF;nc|ENSG00000198231|Q86XP3-2|DDX42	70.39856735676683	0.13906523160059378	4				NaN	NaN	0	NaN	9665	3554	13217
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13222	34.326	NaN	12570	30	0	1293.7	0.106				-1	TDATSVCTAL	10	76	519.7409059793997	NaN	0	519.7410278320312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_TDATSVC(Carbamidomethyl (C))TAL_	ENSG00000153339|ENST00000283351|TRAPPC8;TRAPPC8|p.I1181Lfs*4|1|0.23|ENSG00000153339|chr18:31852462-31852466|ATGAT/-|frameshift_variant	64.20726635412375	0.1999210135493042	4				NaN	NaN	0	NaN	9666	3554	13217
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13223	34.328	NaN	14124	30	0	3013.9	0.106			+	26052	LSLNLDKL	8	72	458.2788435891367	914.5431342450735	2	458.279052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSLNLDKL_	REV__ENSG00000102290|ENST00000682573|PCDH11X;REV__ENST00000361724.3_1_X:91090458-91134302:+|nuORF;REV__nc|ENSG00000099715|Q9BZA8-2|PCDH11Y;REV__nc|ENSG00000099715|Q9BZA8-3|PCDH11Y;REV__nc|ENSG00000099715|Q9BZA8-4|PCDH11Y;REV__nc|ENSG00000099715|Q9BZA8|PCDH11Y;REV__nc|ENSG00000102290|Q9BZA7-2|PCDH11X;REV__nc|ENSG00000102290|Q9BZA7-3|PCDH11X;REV__nc|ENSG00000102290|Q9BZA7-4|PCDH11X;REV__nc|ENSG00000102290|Q9BZA7-5|PCDH11X;REV__nc|ENSG00000102290|Q9BZA7-6|PCDH11X;REV__nc|ENSG00000102290|Q9BZA7-7|PCDH11X;REV__nc|ENSG00000102290|Q9BZA7-8|PCDH11X;REV__PCDH11X|p.N183Tfs*19|1|0.47|ENSG00000102290|chrX:91876785-91876785|A/-|frameshift_variant;REV__PCDH11X|p.N460Mfs*12|1|0.6|ENSG00000102290|chrX:91877616-91877616|A/-|frameshift_variant	60.97194046774394	0.49215940876911696	4				NaN	NaN	0	NaN	9667	3554	13217
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13224	34.329	NaN	11644	30	0	507.98	0.036	+			46394	VELRQVTQM	9	80	552.2975872101962	1102.5806214871923	2	552.298583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VELRQVTQM_	DSP|p.R1458Q|1|0.27|ENSG00000096696|chr6:7580563-7580563|G/A|missense_variant;ENSG00000096696|ENST00000379802|DSP	45.908116695636124	0.35095954387056183	4				NaN	NaN	0	NaN	9668	3554	13217
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13234	34.351	NaN	19657	30	0	6416.4	0.214	+			25186	LMAQLDPLF	9	81	524.2804338634726	1046.546314793745	2	524.284423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LMAQLDPLF_	ENSG00000159884|ENST00000426546|CCDC107;ENST00000421582.2_2_9:35660480-35660645:+|nuORF;nc|ENSG00000159884|Q8WV48-2|CCDC107;nc|ENSG00000159884|Q8WV48-3|CCDC107;nc|ENSG00000159884|Q8WV48-5|CCDC107	76.7741389293348	0.11149722112137898	4				NaN	NaN	0	NaN	9675	3557	13233
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13235	34.355	NaN	35829	30	0	8495.5	0.106				-1	 	0	65	461.25503875685433	920.4955245805087	2	461.25567626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9676	3557	13233
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13236	34.357	NaN	9131.9	30	0	1932.7	0.106	+			47346	VPDSSGPERIL	11	79	585.31130399882	1168.60805506444	2	585.3125610351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VPDSSGPERIL_	ENSG00000165119|ENST00000376263|HNRNPK;nc|ENSG00000165119|P61978-3|HNRNPK;nc|ENSG00000165119|P61978|HNRNPK	82.83050618871818	0.12877585057862004	4				NaN	NaN	0	NaN	9677	3557	13233
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13237	34.359	NaN	9413.4	30	0	1070.2	0.106			+	7719	DLSILGLIAG	10	78	486.2917786525399	970.5690043718798	2	486.2926025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DLSILGLIAG_	REV__ENSG00000212807|ENST00000641810|OR2A42;REV__ENSG00000221970|ENST00000641044|OR2A1;REV__OR2A1|p.V68Sfs*30|1|0.04|ENSG00000221970|chr7:144318325-144318325|C/-|frameshift_variant	138.24224950522367	0.011222741386778076	4				NaN	NaN	0	NaN	9678	3557	13233
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13238	34.361	NaN	5456.6	30	0	744.02	0.106	+			1365	AEVGAAETTL	10	66	481.24486730679723	960.4751816803945	2	481.2453308105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEVGAAETTL_	ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF	65.46538089061403	0.31613324008013116	4				NaN	NaN	0	NaN	9679	3557	13233
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13239	34.362	NaN	3283.1	30	0	674.91	0.039				-1	EEMGSGVHQLF	11	60	417.1885397480378	1248.5437898443133	3	417.18896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_EEM(Oxidation (M))GSGVHQLF_	ENSG00000271503|ENST00000651122|CCL5	22.561587123415745	0.7531385481947795	4				NaN	NaN	0	NaN	9680	3557	13233
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13240	34.363	NaN	2055.6	30	0	606.15	0.141				-1	 	0	46	329.21782158317654	984.6316353497297	3	329.21832275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9681	3557	13233
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13253	34.392	NaN	26730	30	0	12211	0.214	+			23467	LAELGLLEQ	9	88	493.2815622763258	984.5485716194516	2	493.2818603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LAELGLLEQ_	ENST00000598734.1_1_19:39421606-39422228:+|nuORF	94.00642277110589	0.05356993013874309	4				NaN	NaN	0	NaN	9691	3560	13252
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13254	34.396	NaN	13850	30	0	3992.5	0.106				-1	 	0	79	500.2948103606547	998.5750677881094	2	500.2954406738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9692	3560	13252
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13255	34.398	NaN	6491.6	30	0	1220.7	0.106				-1	 	0	50	341.7154082154329	681.4162634976658	2	341.7159118652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9693	3560	13252
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13256	34.4	NaN	12468	30	0	1147	0.106	+			44927	TVAKLYHGAQ	10	94	544.297767280208	1086.5809816272158	2	544.2988891601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TVAKLYHGAQ_	ENST00000570217.1_1_16:89972581-89984411:+|nuORF	49.536043120802724	0.461275219792494	4				NaN	NaN	0	NaN	9694	3560	13252
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13257	34.401	NaN	13674	30	0	3843.7	0.106	+			19091	IYIKQIKTF	9	72	385.2374281282216	1152.6904549848648	3	385.23760986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IYIKQIKTF_	ENSG00000103479|ENST00000262133|RBL2	47.95952297671804	0.32689736945648856	4				NaN	NaN	0	NaN	9695	3560	13252
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13258	34.403	NaN	5133.4	30	0	512.71	0.035	+			9277	EHIAIEGIM	9	70	506.7597963469323	1011.5050397606647	2	506.7599182128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EHIAIEGIM_	ENSG00000080200|ENST00000389622|CRYBG3	57.81127852772723	0.2318599694398087	4				NaN	NaN	0	NaN	9696	3560	13252
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13259	34.404	NaN	6077.5	30	0	643.45	0.14	+			23362	KYVKGLISI	9	71	510.8256235048482	1019.6366940764964	2	510.8263244628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KYVKGLISI_	ENSG00000118965|ENST00000281405|WDR35;nc|ENSG00000118965|Q9P2L0|WDR35;WDR35|p.R782*|1|0.2|ENSG00000118965|chr2:19936322-19936323|-/A|frameshift_variant	51.19269402634007	0.2889735674168909	4				NaN	NaN	0	NaN	9697	3560	13252
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13272	34.433	NaN	13698	30	0	3070.9	0.214				-1	 	0	66	434.28622578630177	866.5578986394036	2	434.28662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9707	3563	13271
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13273	34.436	NaN	8818.8	30	0	2141.2	0.106			+	42049	SWQTLGVI	8	73	452.25043363429586	902.4863143353917	2	452.2504577636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SWQTLGVI_	REV__ENSG00000117016|ENST00000372684|RIMS3;REV__nc|ENSG00000117016|Q9UJD0-2|RIMS3	40.5726180659479	0.6527593143185008	4				NaN	NaN	0	NaN	9708	3563	13271
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13274	34.438	NaN	8670.6	30	0	1931.7	0.106	+			49759	VYPSSLSKI	9	70	497.28372676403075	992.5529005948615	2	497.284423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYPSSLSKI_	ENSG00000111530|ENST00000545606|CAND1;nc|ENSG00000111530|Q86VP6-2|CAND1	71.87747018426188	0.13267044672804276	4				NaN	NaN	0	NaN	9709	3563	13271
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13275	34.44	NaN	5129.8	30	0	993.61	0.106	+			10360	ETVTKILR	8	60	480.2964594384519	958.5783659437038	2	480.297607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ETVTKILR_	ENSG00000185958|ENST00000327337|FAM186A;FAM186A|p.K741Rfs*10|1|0.13|ENSG00000185958|chr12:50354610-50354610|T/-|frameshift_variant;FAM186A|p.K754Rfs*2|2|0.18|ENSG00000185958|chr12:50354571-50354571|T/-|frameshift_variant;FAM186A|p.M1001Nfs*25|1|0.32|ENSG00000185958|chr12:50353830-50353831|-/T|frameshift_variant	79.71258880314673	0.32596852995588826	4				NaN	NaN	0	NaN	9710	3563	13271
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13276	34.442	NaN	5854.3	30	0	622.2	0.106			+	-1	GKVHKCGM	8	71	466.72672844636037	931.4389039595208	2	466.72705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C),Oxidation (M)	_GKVHKC(Carbamidomethyl (C))GM(Oxidation (M))_	REV__ENSG00000073969|ENST00000398238|NSF;REV__nc|ENSG00000073969|P46459-2|NSF;REV__NSF|p.I556Lfs*18|1|0.09|ENSG00000073969|chr17:46713887-46713887|A/-|frameshift_variant	42.47446043378293	0.6409579893742323	4				NaN	NaN	0	NaN	9711	3563	13271
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13277	34.444	NaN	3895.3	30	0	456.64	0.04	+			29527	PECQRLLPPWP	11	72	668.3472195633417	1334.6798861934833	2	668.348388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PECQRLLPPWP_	TP53|p.P60Qfs*63|1|0.38|ENSG00000141510|chr17:7676190-7676190|G/-|frameshift_variant	31.529811441608018	0.6590691889962369	4				NaN	NaN	0	NaN	9712	3563	13271
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13278	34.444	NaN	2990.3	30	0	314.03	0.142	+			38295	SQSTYLIR	8	56	484.26309393657397	966.511634939948	2	484.26348876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SQSTYLIR_	ENSG00000141040|ENST00000395825|ZNF287	45.97224482568171	0.6192535143389125	4				NaN	NaN	0	NaN	9713	3563	13271
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13291	34.474	NaN	57238	30	0	10970	0.214	+			47702	VSFDKLKLT	9	103	525.8127647893176	1049.6109766454351	2	525.8135986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSFDKLKLT_	ENSG00000092607|ENST00000369429|TBX15;ENSG00000167800|ENST00000335385|TBX10;ENSG00000184058|ENST00000649276|TBX1;nc|ENSG00000092607|Q96SF7-2|TBX15;nc|ENSG00000184058|O43435-2|TBX1;nc|ENSG00000184058|O43435-3|TBX1;nc|ENSG00000184058|O43435|TBX1;TBX10|p.P319Rfs*20|1|0.14|ENSG00000167800|chr11:67631807-67631807|G/-|frameshift_variant;TBX15|p.N507Cfs*20|1|0.07|ENSG00000092607|chr1:118885021-118885022|TT/-|frameshift_variant;TBX15|p.T524Hfs*4|1|0.48|ENSG00000092607|chr1:118884971-118884972|-/G|frameshift_variant	58.2462437865262	0.22823408064396822	4				NaN	NaN	0	NaN	9723	3566	13290
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13292	34.477	NaN	41471	30	0	5873.2	0.106	+			41140	SVIVQPFSK	9	94	502.7917046795594	1003.5688564259189	2	502.7923278808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVIVQPFSK_	ENSG00000137871|ENST00000267807|ZNF280D;nc|ENSG00000285253|Q6N043-2|ZNF280D;nc|ENSG00000285253|Q6N043-3|ZNF280D;nc|ENSG00000285253|Q6N043-6|ZNF280D	65.15724298150197	0.17062369902793603	4				NaN	NaN	0	NaN	9724	3566	13290
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13293	34.479	NaN	13362	30	0	2205.2	0.106			+	8180	EAAQKYHKL	9	87	544.297767280208	1086.5809816272158	2	544.2986450195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EAAQKYHKL_	REV__nc|ENSG00000144451|Q8N0X2-4|SPAG16	51.33545320467046	0.2872990594074956	4				NaN	NaN	0	NaN	9725	3566	13290
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13294	34.481	NaN	10642	30	0	1545.8	0.106	+			28746	NPADSISHVAY	11	84	587.2789514987154	1172.5433500642307	2	587.2804565429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NPADSISHVAY_	ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;TRRAP-ASNS|1|fusion;TRRAP-ASNS|2|fusion;TRRAP|p.A1620Cfs*35|1|0.27|ENSG00000196367|chr7:98949499-98949500|-/G|frameshift_variant;TRRAP|p.K3443Sfs*19|1|0.28|ENSG00000196367|chr7:99004246-99004246|A/-|frameshift_variant;TRRAP|p.P1292Lfs*17|1|0.44|ENSG00000196367|chr7:98933258-98933258|C/-|frameshift_variant;TRRAP|p.P1360Afs*14|1|0.05|ENSG00000196367|chr7:98935641-98935642|-/GCAAATAA|frameshift_variant	131.61620852596164	0.001174228902351169	4				NaN	NaN	0	NaN	9726	3566	13290
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13295	34.483	NaN	12536	30	0	2070.9	0.106	+			14883	GTLQPPFTAR	10	86	544.297767280208	1086.5809816272158	2	544.80029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTLQPPFTAR_	ENSG00000185085|ENST00000330574|INTS5;INTS5|p.A801Hfs*4|1|0.19|ENSG00000185085|chr11:62647679-62647679|C/-|frameshift_variant	72.2432373244024	0.2589930451692646	4				NaN	NaN	0	NaN	9727	3566	13290
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13296	34.484	NaN	5886.2	30	0	562.32	0.034	+			18945	IVNSWGTPG	9	70	465.7366050946303	929.4586572560606	2	465.7376403808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IVNSWGTPG_	ENST00000338154.10_1_X:53965491-53965584:-|nuORF	57.81127852772723	0.2318599694398087	4				NaN	NaN	0	NaN	9728	3566	13290
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13297	34.485	NaN	2000.5	30	0	711.49	0.143				-1	 	0	40	339.21426172417694	1014.6209557727309	3	339.2147521972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9729	3566	13290
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13307	34.509	NaN	27983	30	0	5721.7	0.217				-1	 	0	72	495.78400018620874	989.5534474392175	2	495.7843017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9736	3569	13306
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13308	34.512	NaN	16518	30	0	2170.7	0.106	+			23409	LAAPGAFQAQ	10	79	487.25825898770495	972.5019650422099	2	487.2585754394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LAAPGAFQAQ_	ENST00000505443.1_1_5:3531983-3536103:-|nuORF	51.33545320467046	0.4446945571623749	4				NaN	NaN	0	NaN	9737	3569	13306
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13309	34.514	NaN	7929.7	30	0	1333.1	0.106				-1	 	0	70	509.2803600052587	508.2730835386587	1	509.2823791503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9738	3569	13306
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13310	34.516	NaN	5990.9	30	0	762.13	0.106	+			32790	RASSGSINIY	10	78	534.2791125925121	1066.543672251824	2	534.2802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RASSGSINIY_	ENC1|p.G499Vfs*26|1|0.12|ENSG00000171617|chr5:74634990-74634990|C/-|frameshift_variant;ENC1|p.R348Gfs*39|1|0.42|ENSG00000171617|chr5:74635445-74635445|C/-|frameshift_variant;ENC1|p.S350Lfs*37|1|0.18|ENSG00000171617|chr5:74635439-74635439|C/-|frameshift_variant;ENSG00000171617|ENST00000302351|ENC1	66.96192283764107	0.30252237217063654	4				NaN	NaN	0	NaN	9739	3569	13306
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13311	34.518	NaN	3836.5	30	0	335.73	0.106				-1	 	0	60	450.7498849722781	899.4852170113562	2	450.7503662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9740	3569	13306
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13312	34.52	NaN	4938	30	0	390.39	0.106			+	26202	LSSALSIGLVL	11	75	536.83382555461	1071.65309817602	2	536.8348999023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSSALSIGLVL_	REV__nc|ENSG858|P60608|ERVFC1-1	25.57405402267927	0.7215402271931856	4				NaN	NaN	0	NaN	9741	3569	13306
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13313	34.522	NaN	8336.5	30	0	736.8	0.035	+			51094	YLSENKVW	8	85	519.7660953286196	1037.517637724039	2	520.2748413085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YLSENKVW_	tr|U7SSL3|U7SSL3_FUSNUProbableRNA2'-phosphotransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=kptAPE=3SV=1	30.503639358989545	0.7238069182250283	4				NaN	NaN	0	NaN	9742	3569	13306
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13324	34.545	NaN	21076	30	0	3248	0.214	+			30266	PTDKLGLI	8	80	428.7616352222481	855.5087175112963	2	429.7679443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PTDKLGLI_	ENST00000547657.1_1_21:37741970-37758388:+|nuORF	71.37791200682192	0.3954169775488141	4				NaN	NaN	0	NaN	9750	3572	13323
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13325	34.549	NaN	18262	30	0	2036	0.106	+			39648	STIEYVIQR	9	82	554.8024455135477	1107.5903380938953	2	554.8040771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STIEYVIQR_	ENSG00000101310|ENST00000650089|SEC23B	136.26810882979174	0.012230845423532208	4				NaN	NaN	0	NaN	9751	3572	13323
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13326	34.551	NaN	16614	30	0	1937	0.106	+			39885	STLQVGSLNVK	11	79	573.3291940310116	1144.6438351288232	2	573.3302612304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STLQVGSLNVK_	ENSG00000063854|ENST00000397356|HAGH;ENST00000569700.5_1_16:1869077-1876788:-|nuORF;nc|ENSG00000063854|Q16775-2|HAGH	144.55000592163006	0.00014742827238178115	4				NaN	NaN	0	NaN	9752	3572	13323
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13327	34.553	NaN	16902	30	0	2584.8	0.106	+			875	AEHFLEQQM	9	71	566.7574813735171	1131.500409813834	2	566.7586059570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEHFLEQQM_	CCT3|p.A379Lfs*9|1|0.21|ENSG00000163468|chr1:156312061-156312061|C/-|frameshift_variant;CCT3|p.K197Nfs*23|1|0.17|ENSG00000163468|chr1:156320857-156320857|T/-|frameshift_variant;CCT3|p.L350Ffs*9|1|0.49|ENSG00000163468|chr1:156312146-156312147|-/A|frameshift_variant;ENSG00000163468|ENST00000295688|CCT3;nc|ENSG00000163468|P49368-2|CCT3	73.84112541714126	0.12417958948937492	4				NaN	NaN	0	NaN	9753	3572	13323
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13328	34.554	NaN	11366	30	0	2595.6	0.106	+			14899	GTLSSYIVK	9	69	484.276357430839	966.5381619284781	2	484.2763977050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTLSSYIVK_	ENSG00000082068|ENST00000265107|WDR70	104.0567914643314	0.03506238181059741	4				NaN	NaN	0	NaN	9754	3572	13323
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13329	34.556	NaN	8988.7	30	0	817.57	0.106	+			49769	VYQHGLTGF	9	77	511.25888414268854	1020.5032153521771	2	511.258544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VYQHGLTGF_	ENSG00000030110|ENST00000374467|BAK1	101.60071028292904	0.0375685401170269	4				NaN	NaN	0	NaN	9755	3572	13323
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13330	34.558	NaN	5946.1	30	0	553.16	0.033	+			46602	VFRVSSSL	8	65	447.75528557521255	893.4960182172251	2	447.7556457519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VFRVSSSL_	ENSG00000196214|ENST00000439461|ZNF766;ENSG00000198464|ENST00000595962|ZNF480;ENSG00000198633|ENST00000433050|ZNF534;ENST00000599581.5_1_19:52786637-52794448:+|nuORF;nc|ENSG00000198464|Q8WV37-2|ZNF480;nc|ENSG00000198464|Q8WV37-3|ZNF480;nc|ENSG00000198633|Q76KX8|ZNF534;ZNF534|p.R421Gfs*23|1|0.32|ENSG00000198633|chr19:52438676-52438676|G/-|frameshift_variant	125.81401957644128	0.2262431007506538	4				NaN	NaN	0	NaN	9756	3572	13323
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13348	34.596	NaN	22717	30	0	1784.6	0.214	+			8275	EAIALAEKY	9	84	504.2736396098535	1006.532726286507	2	504.2739562988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EAIALAEKY_	ENSG00000069974|ENST00000336787|RAB27A	158.07458414430337	0.004987072822166904	4				NaN	NaN	0	NaN	9771	3575	13347
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13349	34.599	NaN	19033	30	0	4040.2	0.106	+			50828	YETEGIRGL	9	95	519.2673853061184	NaN	0	519.26708984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YETEGIRGL_	ENSG00000076003|ENST00000264156|MCM6;MCM6|p.K365Nfs*6|1|0.23|ENSG00000076003|chr2:135862732-135862732|T/-|frameshift_variant;MCM6|p.R771Efs*3|1|0.33|ENSG00000076003|chr2:135844583-135844583|T/-|frameshift_variant	77.31757898189308	0.08057531075035683	4				NaN	NaN	0	NaN	9772	3575	13347
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13350	34.601	NaN	7216	30	0	1094.1	0.106			+	26044	LSLKGEIP	8	70	428.7616352222481	855.5087175112963	2	428.760498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSLKGEIP_	REV__ENSG00000122970|ENST00000242591|IFT81;REV__ENST00000549009.1_1_12:110574622-110600787:+|nuORF;REV__IFT81|p.L493Tfs*7|1|0.42|ENSG00000122970|chr12:110192619-110192620|-/A|frameshift_variant;REV__nc|ENSG00000122970|Q8WYA0-3|IFT81	71.87747018426188	0.391254423828572	4				NaN	NaN	0	NaN	9773	3575	13347
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13351	34.603	NaN	11856	30	0	1222	0.106				-1	MALVPCQVL	9	81	536.7812736553698	NaN	0	536.7809448242188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))MALVPC(Carbamidomethyl (C))QVL_	ENSG00000146416|ENST00000357847|AIG1;nc|ENSG00000146416|Q9NVV5-1|AIG1;nc|ENSG00000146416|Q9NVV5-3|AIG1;nc|ENSG00000146416|Q9NVV5-5|AIG1;nc|ENSG00000146416|Q9NVV5-6|AIG1	57.81127852772723	0.15865383123342353	4				NaN	NaN	0	NaN	9774	3575	13347
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13352	34.605	NaN	2565.9	30	0	239.85	0.106				-1	 	0	43	402.7577726179857	803.5009923027715	2	402.7581481933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9775	3575	13347
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13353	34.607	NaN	5199.1	30	0	691.73	0.036	+			36373	SETEYVIRC	9	69	550.2583760908523	1098.5021992485044	2	550.259033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SETEYVIRC_	ENSG00000181789|ENST00000314797|COPG1	56.72105179125745	0.24094814563026265	4				NaN	NaN	0	NaN	9776	3575	13347
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13354	34.607	NaN	3064.3	30	0	698.93	0.143			+	21801	KQYKAIKE	8	43	336.53426418257783	NaN	0	336.5342102050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KQYKAIKE_	REV__ENSG00000134697|ENST00000373062|GNL2	18.324413293986947	1.7418937515398478	4				NaN	NaN	0	NaN	9777	3575	13347
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13363	34.629	NaN	66837	30	0	21361	0.214			+	38361	SRPREKKGK	9	86	564.3363310335735	1126.658109133947	2	564.3375854492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SRPREKKGK_	REV__ENSG00000186468|ENST00000296674|RPS23;REV__ENST00000429775.2_1_X:70182861-70183140:+|nuORF;REV__ENST00000491662.1_1_8:98877671-98877710:+|nuORF	47.657333605630114	0.33044192980041115	4				NaN	NaN	0	NaN	9783	3578	13362
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13364	34.633	NaN	13815	30	0	1272.4	0.106	+			23284	KYLSGIAHF	9	85	518.284294053493	1034.554035173786	2	518.2850952148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KYLSGIAHF_	ENSG00000165688|ENST00000371717|PMPCA;ENST00000371720.5_1_9:139305120-139310743:+|nuORF;PMPCA|p.E101D|1|0.05|ENSG00000165688|chr9:136412518-136412518|A/C|missense_variant	104.74654710444128	0.034358562718640136	4				NaN	NaN	0	NaN	9784	3578	13362
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13365	34.635	NaN	12810	30	0	2380	0.106				-1	 	0	75	436.26549399693357	870.5164350606672	2	436.2657775878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9785	3578	13362
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13366	34.637	NaN	8466.1	30	0	1135.9	0.106				-1	 	0	60	350.720738552296	699.426924171392	2	350.72119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9786	3578	13362
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13367	34.638	NaN	20814	30	0	6504.6	0.106	+			32235	QTFLLQTTK	9	87	540.3071655968357	1078.5997782604713	2	540.3087158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QTFLLQTTK_	ENSG00000149480|ENST00000278823|MTA2;MTA2|p.A568Qfs*29|1|0.23|ENSG00000149480|chr11:62594402-62594402|T/-|frameshift_variant;MTA2|p.I556Hfs*8|1|0.29|ENSG00000149480|chr11:62594543-62594544|-/C|frameshift_variant;nc|ENSG00000149480|O94776-2|MTA2	120.30596017624542	0.02101454110788768	4				NaN	NaN	0	NaN	9787	3578	13362
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13368	34.64	NaN	15068	30	0	1069.4	0.106	+			29173	NVIRDAVTY	9	96	525.781766082046	1049.548979230892	2	525.783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NVIRDAVTY_	ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2	51.19269402634007	0.2889735674168909	4				NaN	NaN	0	NaN	9788	3578	13362
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13369	34.642	NaN	7450.2	30	0	1491	0.035	+			12183	GANSLFLEK	9	67	489.7662703596379	977.5179877860758	2	489.7663269042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GANSLFLEK_	ENSG00000183864|ENST00000327492|TOB2	148.6902309647307	0.00717441509122429	4				NaN	NaN	0	NaN	9789	3578	13362
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13379	34.664	NaN	26189	30	0	3283.2	0.214	+			27219	MEKGDMVTL	9	81	512.2448887736084	1022.4752246140168	2	512.2461547851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MEKGDMVTL_	ENSG00000182551|ENST00000327435|ADI1;nc|ENSG00000182551|Q9BV57-2|ADI1	88.17693792209575	0.07000514020414955	4				NaN	NaN	0	NaN	9796	3581	13378
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13380	34.667	NaN	12975	30	0	1220.9	0.106	+			26300	LSVFCWHI	8	83	502.75522217006926	1003.4958914069385	2	502.755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSVFCWHI_	FLRT2|p.M566I|1|0.29|ENSG00000185070|chr14:85623212-85623212|G/A|missense_variant	37.028477286268924	0.6747514403204248	4				NaN	NaN	0	NaN	9797	3581	13378
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13381	34.669	NaN	12408	30	0	1886.6	0.106				-1	 	0	75	524.2945513731449	1046.5745498130898	2	524.2955932617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9798	3581	13378
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13382	34.671	NaN	10115	30	0	4153.1	0.106				-1	 	0	67	464.7760801914185	927.537607449637	2	464.7763977050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9799	3581	13378
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13383	34.673	NaN	7251.5	30	0	598.77	0.106			+	1486	AFPEDLLIF	9	79	532.7868858586633	1063.5592187841264	2	532.7905883789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AFPEDLLIF_	REV__tr|U7SVN4|U7SVN4_FUSNULipopolysaccharideexportsystemATP-bindingproteinLptBOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01284PE=3SV=1	47.657333605630114	0.33044192980041115	4				NaN	NaN	0	NaN	9800	3581	13378
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13384	34.675	NaN	8745.3	30	0	533.42	0.034				-1	 	0	69	477.8020334664641	953.5895139997282	2	477.80224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9801	3581	13378
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13385	34.675	NaN	4404.9	30	0	341.8	0.14	+			37867	SNRRLERK	8	74	529.813296440785	1057.61203994837	2	529.8140869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SNRRLERK_	ENSG00000128849|ENST00000281282|CGNL1;nc|ENSG00000128849|Q0VF96-2|CGNL1	45.9519527083369	0.6193794311207887	4				NaN	NaN	0	NaN	9802	3581	13378
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13399	34.706	NaN	59601	30	0	26204	0.214	+			49889	VYTSGVYHI	9	91	519.7660953286196	1037.517637724039	2	519.7665405273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYTSGVYHI_	ENSG00000111077|ENST00000314250|TNS2;ENST00000549311.7_1_12:53443879-53456445:+|nuORF;nc|ENSG00000111077|Q63HR2-2|TNS2;nc|ENSG00000111077|Q63HR2-4|TNS2;nc|ENSG00000111077|Q63HR2-5|TNS2;nc|ENSG00000111077|Q63HR2-6|TNS2;TNS2|p.G362Rfs*43|1|0.33|ENSG00000111077|chr12:53058087-53058088|-/A|frameshift_variant;TNS2|p.K660Nfs*96|1|0.2|ENSG00000111077|chr12:53059615-53059615|G/-|frameshift_variant;TNS2|p.P495Rfs*25|2|0.33|ENSG00000111077|chr12:53059119-53059119|C/-|frameshift_variant	115.45897859103373	0.02394878348088707	4				NaN	NaN	0	NaN	9813	3584	13398
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13400	34.71	NaN	20818	30	0	2483.2	0.106	+			35836	SEDDVKMAL	9	88	504.2379155591153	1006.4612781850307	2	504.23895263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEDDVKMAL_	ENSG00000169813|ENST00000682386|HNRNPF	104.0567914643314	0.03506238181059741	4				NaN	NaN	0	NaN	9814	3584	13398
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13401	34.712	NaN	35263	30	0	4393.2	0.106				-1	MDASSLRRP	9	86	524.7636266239346	1047.512700314669	2	524.7640380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))DASSLRRP_	ENST00000373625.7_1_1:32637764-32637932:+|nuORF	96.19043198914106	0.047412499214244314	4				NaN	NaN	0	NaN	9815	3584	13398
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13402	34.714	NaN	9653.3	30	0	1431.1	0.106	+			42311	TAFENAYLK	9	69	528.7714571643615	1055.528361395523	2	528.7722778320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TAFENAYLK_	ATM|p.C1838Vfs*8|1|0.42|ENSG00000149311|chr11:108304687-108304687|T/-|frameshift_variant;ATM|p.G1642Wfs*23|1|0.78|ENSG00000149311|chr11:108297299-108297300|-/T|frameshift_variant;ATM|p.G2425Vfs*15|1|0.33|ENSG00000149311|chr11:108329204-108329204|G/-|frameshift_variant;ATM|p.I1581Sfs*20|1|0.25|ENSG00000149311|chr11:108293437-108293437|A/-|frameshift_variant;ATM|p.K1170Nfs*11|1|0.26|ENSG00000149311|chr11:108281098-108281098|A/-|frameshift_variant;ATM|p.K2303Rfs*7|2|0.24|ENSG00000149311|chr11:108326153-108326153|A/-|frameshift_variant;ATM|p.K2413Tfs*11|1|0.06|ENSG00000149311|chr11:108329168-108329169|-/CAACCAATTTAAATTAT|frameshift_variant;ATM|p.K2811Sfs*46|1|0.34|ENSG00000149311|chr11:108345750-108345750|A/-|frameshift_variant;ATM|p.L2231Wfs*4|1|0.52|ENSG00000149311|chr11:108325426-108325426|T/-|frameshift_variant;ATM|p.P1587Ffs*13|1|0.08|ENSG00000149311|chr11:108293459-108293462|ACCC/-|frameshift_variant;ATM|p.R1973Efs*17|1|0.26|ENSG00000149311|chr11:108310311-108310311|A/-|frameshift_variant;ATM|p.T1609*|1|0.23|ENSG00000149311|chr11:108294972-108294973|-/TG|frameshift_variant;ATM|p.V1446Cfs*2|1|0.25|ENSG00000149311|chr11:108289697-108289698|-/T|frameshift_variant;ENSG00000149311|ENST00000675843|ATM	68.84614121027924	0.14577793175421136	4				NaN	NaN	0	NaN	9816	3584	13398
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13403	34.716	NaN	5439.4	30	0	1135.1	0.106				-1	 	0	60	461.25503875685433	920.4955245805087	2	461.2552185058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9817	3584	13398
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13404	34.717	NaN	9474.5	30	0	640.21	0.034			+	10433	EVKLEQLL	8	81	486.2917786525399	970.5690043718798	2	486.2920837402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EVKLEQLL_	REV__KLHL1|p.V144L|1|0.04|ENSG00000150361|chr13:70107270-70107270|C/G|missense_variant	71.87747018426188	0.391254423828572	4				NaN	NaN	0	NaN	9818	3584	13398
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13405	34.718	NaN	21535	30	0	2577.5	0.143				-1	 	0	91	602.7953981864806	1203.5762434397611	2	602.795654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9819	3584	13398
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13414	34.74	NaN	16317	30	0	2297.4	0.214				-1	 	0	73	471.2576342896231	940.5007156460463	2	471.2579345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9825	3587	13413
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13415	34.743	NaN	24271	30	0	3576.8	0.106				-1	 	0	89	552.7964594246858	1103.5783659161716	2	552.7972412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9826	3587	13413
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13416	34.745	NaN	8503.8	30	0	1273.8	0.106	+			739	AEAYVRKY	8	82	500.2660070182494	998.5174611032988	2	500.2663879394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEAYVRKY_	tr|U7T0A5|U7T0A5_FUSNUDNApolymeraseIIIPolC-typeOS=FusobacteriumnucleatumCTI-5OX=1316586GN=polCPE=3SV=1	73.97473282117947	0.3737790450121076	4				NaN	NaN	0	NaN	9827	3587	13413
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13417	34.747	NaN	6384.5	30	0	726.68	0.106				-1	ALALPCSHL	9	72	491.26243188375423	980.5103108343085	2	491.26275634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_ALALPC(Carbamidomethyl (C))SHL_	ENST00000477184.5_1_7:102122979-102123225:-|nuORF	68.484700416344	0.1473408039581241	4				NaN	NaN	0	NaN	9828	3587	13413
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13418	34.749	NaN	10288	30	0	896.24	0.106	+			47622	VSAGPSSQQL	10	84	487.25118206171425	NaN	0	487.2511291503906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSAGPSSQQL_	nc|ENSG00000142230|Q9UBE0-3|SAE1	72.87924865735499	0.13450315462291293	4				NaN	NaN	0	NaN	9829	3587	13413
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13419	34.751	NaN	6549.7	30	0	616.08	0.106	+			29149	NVDKKQGI	8	68	451.25771206801176	900.5008712028235	2	451.25830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NVDKKQGI_	ENSG00000145331|ENST00000394876|TRMT10A;ENST00000507394.1_1_4:100479199-100480495:-|nuORF;TRMT10A|p.K68Nfs*7|1|0.12|ENSG00000145331|chr4:99558193-99558193|T/-|frameshift_variant	58.78195531508484	0.5138399468736706	4				NaN	NaN	0	NaN	9830	3587	13413
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13420	34.753	NaN	8950.7	30	0	1435.5	0.036	+			4929	ATQNQLLFH	9	77	536.2820689546863	NaN	0	536.2830810546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATQNQLLFH_	ENSG00000139116|ENST00000361418|KIF21A;KIF21A|p.L1270Sfs*13|1|0.12|ENSG00000139116|chr12:39318174-39318175|-/G|frameshift_variant;KIF21A|p.P1541Lfs*6|1|0.27|ENSG00000139116|chr12:39303074-39303074|G/-|frameshift_variant;nc|ENSG00000139116|Q7Z4S6-2|KIF21A;nc|ENSG00000139116|Q7Z4S6-3|KIF21A;nc|ENSG00000139116|Q7Z4S6-4|KIF21A;nc|ENSG00000139116|Q7Z4S6-5|KIF21A;nc|ENSG00000139116|Q7Z4S6-6|KIF21A	138.24224950522367	0.0005149821220566962	4				NaN	NaN	0	NaN	9831	3587	13413
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13431	34.776	NaN	23529	30	0	4387.4	0.214	+			49927	VYVERAEVL	9	88	539.2998315961465	1076.585110259093	2	539.3008422851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYVERAEVL_	ENSG00000089234|ENST00000419234|BRAP	109.47833844074708	0.029530294723441826	4				NaN	NaN	0	NaN	9839	3590	13430
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13432	34.78	NaN	19168	30	0	1793.6	0.106			+	10898	FDAPKPHIMQ	10	83	592.3004901267554	1182.5864273203108	2	592.3016357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FDAPKPHIMQ_	REV__ENSG00000149262|ENST00000534064|INTS4	47.657333605630114	0.47858658696240314	4				NaN	NaN	0	NaN	9840	3590	13430
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13433	34.782	NaN	10100	30	0	2155.8	0.106	+			37631	SLQGFPSEK	9	73	496.75707910124015	991.4996052692803	2	498.2560729980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLQGFPSEK_	ENSG00000039319|ENST00000505560|ZFYVE16	49.536043120802724	0.308405419312776	4				NaN	NaN	0	NaN	9841	3590	13430
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13434	34.784	NaN	6491	30	0	921.15	0.106	+			5159	ATSVVSFVR	9	65	483.2736221745848	964.5326914159696	2	483.2738952636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATSVVSFVR_	ENSG00000162817|ENST00000294889|C1orf115	101.25262130126117	0.03792372629710479	4				NaN	NaN	0	NaN	9842	3590	13430
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13435	34.785	NaN	4438.2	30	0	1800.7	0.106	+			8378	EAMEWVIHK	9	70	571.7857922882197	1141.5570316432393	2	571.7871704101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EAMEWVIHK_	ENSG00000101166|ENST00000355937|PRELID3B;nc|ENSG00000101166|Q9Y3B1-2|PRELID3B	104.74654710444128	0.034358562718640136	4				NaN	NaN	0	NaN	9843	3590	13430
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13436	34.787	NaN	8468.4	30	0	1239.3	0.106	+			5728	AVFQELKV	8	71	467.27267229432755	932.5307916554551	2	467.2731628417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AVFQELKV_	ENSG00000139211|ENST00000550413|AMIGO2	66.42927471994793	0.4381325844043345	4				NaN	NaN	0	NaN	9844	3590	13430
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13437	34.789	NaN	4727.2	30	0	951.45	0.036			+	-1	ERGQPGQPCS	10	74	558.2483298903677	1114.4821068475353	2	558.249267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_ERGQPGQPC(Carbamidomethyl (C))S_	REV__ENSG00000171813|ENST00000305233|PWWP2B;REV__nc|ENSG00000171813|Q6NUJ5-2|PWWP2B	39.252832667884924	0.5560298534376815	4				NaN	NaN	0	NaN	9845	3590	13430
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13448	34.813	NaN	118630	30	0	34279	0.213	+			4242	ATGDMSGLLK	10	104	496.75707910124015	991.4996052692803	2	496.75750732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATGDMSGLLK_	ENSG00000127837|ENST00000248450|AAMP;ENST00000475678.5_1_2:219131145-219134809:-|nuORF;ENST00000489767.5_1_2:219130391-219134818:-|nuORF	136.98908636845044	0.01155686115611441	4				NaN	NaN	0	NaN	9853	3593	13447
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13449	34.816	NaN	14369	30	0	4592.6	0.106	+			46489	VETQKTFTL	9	80	533.7916263019015	1065.5686996706029	2	533.7926025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VETQKTFTL_	ENSG00000128833|ENST00000261839|MYO5C;ENST00000558902.5_1_15:52548900-52571163:-|nuORF;ENST00000560809.5_1_15:52557394-52562028:-|nuORF;MYO5C|p.E1050Sfs*8|1|0.32|ENSG00000128833|chr15:52229192-52229192|C/-|frameshift_variant;MYO5C|p.I480Nfs*10|1|0.5|ENSG00000128833|chr15:52253414-52253415|-/T|frameshift_variant;MYO5C|p.L1151Wfs*19|1|0.17|ENSG00000128833|chr15:52223719-52223719|A/-|frameshift_variant;MYO5C|p.L933Hfs*33|1|0.04|ENSG00000128833|chr15:52237552-52237553|-/T|frameshift_variant;MYO5C|p.L933Sfs*35|1|0.04|ENSG00000128833|chr15:52237553-52237554|-/AAGTGGA|frameshift_variant;nc|ENSG00000128833|Q9NQX4-2|MYO5C	77.53327743719008	0.1082147015697554	4				NaN	NaN	0	NaN	9854	3593	13447
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13450	34.818	NaN	7699.4	30	0	570.62	0.106				-1	SVCRCDRK	8	84	512.2448887736084	1022.4752246140168	2	512.24609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SVC(Carbamidomethyl (C))RCDRK_	FLRT2|p.N45K|1|0.36|ENSG00000185070|chr14:85621649-85621649|C/A|missense_variant	44.116797842482775	0.6307669463330267	4				NaN	NaN	0	NaN	9855	3593	13447
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13451	34.82	NaN	7801.6	30	0	1092.5	0.106	+			2275	ALYGVVNVK	9	79	481.7857852629141	961.5570175926282	2	481.7870178222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ALYGVVNVK_	ENSG00000135108|ENST00000622495|FBXO21;nc|ENSG00000135108|O94952|FBXO21	102.7733458925114	0.03637199559902695	4				NaN	NaN	0	NaN	9856	3593	13447
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13452	34.822	NaN	5574	30	0	631.14	0.106	+			7192	DAHMLDTQY	9	65	547.234153181039	1092.453753428878	2	547.2352905273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DAHMLDTQY_	ENSG00000130589|ENST00000467148|HELZ2;ENST00000478861.1_1_20:62190259-62192809:-|nuORF;nc|ENSG00000130589|Q9BYK8-2|HELZ2;nc|ENSG00000130589|Q9BYK8|HELZ2	82.24051045832904	0.08786059719216216	4				NaN	NaN	0	NaN	9857	3593	13447
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13453	34.824	NaN	7254.1	30	0	617.26	0.037	+			51118	YMNRRASQM	9	82	586.7720169780927	NaN	0	586.7739868164062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_YMNRRASQM(Oxidation (M))_	ENSG00000149742|ENST00000279178|SLC22A9	53.351449002276354	0.18359631779194618	4				NaN	NaN	0	NaN	9858	3593	13447
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13454	34.824	NaN	8644.9	30	0	713.08	0.141			+	13575	GLTSPNITN	9	85	458.73865725254757	915.4627615718952	2	458.74017333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GLTSPNITN_	REV__ENSG00000152763|ENST00000371026|DNAI4;REV__ENST00000531980.5_1_1:67337151-67359009:-|nuORF;REV__nc|ENSG00000152763|Q5VTH9-2|DNAI4	54.776311868738084	0.25715957988447635	4				NaN	NaN	0	NaN	9859	3593	13447
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13463	34.846	NaN	27675	30	0	3681.3	0.214	+			50663	YEEELREL	8	91	540.7636087388225	1079.512664544445	2	540.7642822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YEEELREL_	ENSG00000175084|ENST00000373960|DES	90.60085204095205	0.2756512185673585	4				NaN	NaN	0	NaN	9865	3596	13462
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13464	34.85	NaN	9206.6	30	0	671.78	0.106				-1	 	0	81	499.8333360798105	997.6521192264211	2	499.83392333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9866	3596	13462
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13465	34.851	NaN	8383.3	30	0	1468.4	0.106	+			12813	GEMTLKSAL	9	79	475.2560581824105	948.4975634316211	2	475.25445556640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEMTLKSAL_	ENSG00000041357|ENST00000044462|PSMA4;nc|ENSG00000041357|P25789-2|PSMA4	106.68306549817024	0.032382560583716295	4				NaN	NaN	0	NaN	9867	3596	13462
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13466	34.853	NaN	15279	30	0	2005.5	0.106	+			12577	GEGVKLQVM	9	83	480.7621598253881	959.5097667175762	2	480.762939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEGVKLQVM_	ENSG00000065427|ENST00000302445|KARS1;ENST00000451871.1_1_13:42499863-42500601:+|nuORF;ENST00000566560.5_1_16:75668010-75682538:-|nuORF;nc|ENSG00000065427|Q15046-2|KARS1	75.04331003522576	0.118981335847003	4				NaN	NaN	0	NaN	9868	3596	13462
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13467	34.855	NaN	6371.1	30	0	710.03	0.106			+	48128	VSVNSFEKI	9	83	511.7787530564782	1021.5429531797564	2	511.780029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSVNSFEKI_	REV__ATP2C2|p.E482Rfs*13|1|0.43|ENSG00000064270|chr16:84446364-84446364|A/-|frameshift_variant;REV__ATP2C2|p.Y727Tfs*11|2|0.26|ENSG00000064270|chr16:84459146-84459146|T/-|frameshift_variant;REV__ENSG00000064270|ENST00000262429|ATP2C2;REV__nc|ENSG00000064270|O75185-2|ATP2C2;REV__nc|ENSG00000064270|O75185-3|ATP2C2	49.536043120802724	0.308405419312776	4				NaN	NaN	0	NaN	9869	3596	13462
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13468	34.857	NaN	3413.9	30	0	279.22	0.106				-1	LAALIPSCH	9	72	491.26243188375423	980.5103108343085	2	491.26348876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_LAALIPSC(Carbamidomethyl (C))H_	ENST00000555222.5_1_12:57492966-57496222:-|nuORF	60.29395666154354	0.21116425950210296	4				NaN	NaN	0	NaN	9870	3596	13462
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13469	34.859	NaN	5051.1	30	0	940.75	0.038	+			18178	ILVTIQFEDV	10	55	392.888828984017	1175.644657552251	3	392.888916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ILVTIQFEDV_	ENST00000360663.9_2_10:75230495-75230888:-|nuORF	23.04248740728303	0.69165701907106	4				NaN	NaN	0	NaN	9871	3596	13462
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13475	34.875	NaN	6805.6	30	0	554.95	0.214	+			26178	LSRHSDAPLR	10	74	576.3180687935844	1150.6215846539687	2	576.3189697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSRHSDAPLR_	ENST00000309311.6_1_19:3976399-3976465:-|nuORF	59.93077597824379	0.36646980200755325	4				NaN	NaN	0	NaN	9874	3599	13474
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13476	34.878	NaN	16487	30	0	1400.4	0.106				-1	 	0	89	522.8178885289152	1043.6212241246303	2	522.818603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9875	3599	13474
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13477	34.88	NaN	10468	30	0	2853.8	0.106				-1	 	0	80	348.88085263725384	1043.6207285119615	3	348.8813171386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9876	3599	13474
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13478	34.882	NaN	5956.8	30	0	1421.7	0.106			+	11255	FILTYPLTF	9	75	557.8137501945179	1113.6129474558356	2	557.814697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FILTYPLTF_	REV__ENST00000587557.5_1_19:9454019-9454262:+|nuORF	40.5726180659479	0.4135428067754104	4				NaN	NaN	0	NaN	9877	3599	13474
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13479	34.884	NaN	6361.4	30	0	525.59	0.106	+			43356	TGDMSGLLK	9	66	461.2381607315609	920.4617685299219	2	461.23858642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TGDMSGLLK_	ENSG00000127837|ENST00000248450|AAMP;ENST00000475678.5_1_2:219131145-219134809:-|nuORF;ENST00000489767.5_1_2:219130391-219134818:-|nuORF	65.46538089061403	0.16805504838372562	4				NaN	NaN	0	NaN	9878	3599	13474
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13480	34.886	NaN	4772.2	30	0	1105.4	0.106			+	-1	FHEDDSAMLSI	11	72	640.7763644946372	1279.5381760560742	2	640.7772216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_FHEDDSAM(Oxidation (M))LSI_	REV__chr15:53523322-53540662|232|17.27|0.17|6.68|-|2|TE_info:L1PA2,L1PA2_dup4399,L1,LINE,donor,+,53540662,53546677|WDR72,None|5;REV__L1PA3_dup1115|chr2:110017555-110020014:+|1.763195504976095|0.4680770941019235|1.91|454.0|80|1|anti-sense;REV__L1PA3_dup1120|chr2:110351377-110353837:-|1.852683732690941|0.4358200479832063|2.09|470.0|80|1|anti-sense;REV__L1PA3_dup1321|chr2:173527290-173533317:-|1.892281258594111|0.2637255971055219|2.84|482.0|171|1|anti-sense;REV__L1PA5_dup2765|chr4:69723015-69726028:+|1.903650506224423|0.171219590839865|3.47|472.0|90|1|anti-sense	24.519189625965996	0.7326048944360514	4				NaN	NaN	0	NaN	9879	3599	13474
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13481	34.887	NaN	4837.3	30	0	773.04	0.035	+			8311	EAISQSTQF	9	76	505.7427917800322	NaN	0	505.7426452636719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EAISQSTQF_	DST|p.K5076Nfs*24|1|0.31|ENSG00000151914|chr6:56472218-56472218|T/-|frameshift_variant;DST|p.T4428Nfs*23|1|0.12|ENSG00000151914|chr6:56497896-56497897|-/T|frameshift_variant;ENSG00000151914|ENST00000680361|DST;nc|ENSG00000151914|Q03001-14|DST;nc|ENSG00000151914|Q03001-8|DST;nc|ENSG00000151914|Q03001|DST	76.16968421966216	0.08450868013726211	4				NaN	NaN	0	NaN	9880	3599	13474
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13489	34.905	NaN	44278	30	0	22058	0.214	+			30489	QAFAQVFNK	9	95	526.7792556163645	1051.5439582995289	2	526.7799682617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QAFAQVFNK_	BZW1|p.N285Tfs*11|2|0.26|ENSG00000082153|chr2:200818782-200818782|A/-|frameshift_variant;BZW1|p.N286*|1|0.04|ENSG00000082153|chr2:200818790-200818791|-/T|frameshift_variant;BZW1|p.S325Rfs*19|1|0.04|ENSG00000082153|chr2:200819989-200819990|-/ACAATATAGAA|frameshift_variant;ENSG00000082153|ENST00000409600|BZW1;nc|ENSG00000082153|Q7L1Q6-2|BZW1;nc|ENSG00000082153|Q7L1Q6-3|BZW1;nc|ENSG00000082153|Q7L1Q6-4|BZW1	166.78253343968296	0.0033161236045811926	4				NaN	NaN	0	NaN	9885	3602	13488
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13490	34.909	NaN	19136	30	0	2718.3	0.106				-1	 	0	89	569.2886102093944	1136.5626674855887	2	569.2899169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9886	3602	13488
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13491	34.911	NaN	8124	30	0	1249.2	0.106	+			18448	ISDTFPGKI	9	78	489.26835600783016	NaN	0	489.2683410644531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ISDTFPGKI_	ENSG00000197077|ENST00000358431|KIAA1671;ENST00000494730.2_1_22:25436553-25570783:+|nuORF;KIAA1671|p.S1569Afs*58|1|0.46|ENSG00000197077|chr22:25174289-25174289|C/-|frameshift_variant;KIAA1671|p.T1322Rfs*192|1|0.18|ENSG00000197077|chr22:25041088-25041088|A/-|frameshift_variant	61.691277971877994	0.14210560126578747	4				NaN	NaN	0	NaN	9887	3602	13488
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13492	34.913	NaN	7397.3	30	0	1305.4	0.106	+			36482	SEVTAALRV	9	65	473.270203184764	944.525853436328	2	473.2713317871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SEVTAALRV_	EEF2|p.E241Rfs*13|1|0.26|ENSG00000167658|chr19:3982316-3982316|C/-|frameshift_variant;ENSG00000167658|ENST00000309311|EEF2	93.1432384553994	0.056003526918089595	4				NaN	NaN	0	NaN	9888	3602	13488
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13493	34.914	NaN	7990.9	30	0	904.17	0.106			+	47575	VRLGGLMAGDP	11	81	543.2923935817201	1084.5702342302402	2	543.2921142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VRLGGLMAGDP_	REV__ENST00000569969.5_2_16:28993234-28993426:+|nuORF	40.77816245573522	0.5472954108598816	4				NaN	NaN	0	NaN	9889	3602	13488
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13494	34.916	NaN	6298.3	30	0	461.54	0.035	+			2421	APEEHPVLL	9	74	502.7736277313963	1003.5327025295926	2	502.7733154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_APEEHPVLL_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF	45.97224482568171	0.3502073465782774	4				NaN	NaN	0	NaN	9890	3602	13488
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13495	34.917	NaN	2520.6	30	0	459.65	0.139			+	20720	KGSSFKSAL	9	58	462.76046599174606	NaN	0	462.760498046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KGSSFKSAL_	REV__ENST00000493892.5_1_1:26310515-26324519:-|nuORF	29.170058357718403	0.3302935627494407	4				NaN	NaN	0	NaN	9891	3602	13488
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13505	34.941	NaN	22403	30	0	2186.2	0.214			+	36893	SIHFREAL	8	85	486.76743186221734	971.5203107912347	2	486.76800537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIHFREAL_	REV__ENSG00000065485|ENST00000316218|PDIA5;REV__ENST00000467157.1_1_3:122864388-122880365:+|nuORF	55.50420428727701	0.5462892107279674	4				NaN	NaN	0	NaN	9898	3605	13504
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13506	34.944	NaN	23461	30	0	6349.4	0.106	+			14575	GTFSKLFGK	9	92	492.7791155314152	983.5436781296304	2	492.7790222167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTFSKLFGK_	ENSG00000188112|ENST00000341865|C6orf132;nc|nan|Q5T0Z8-2|C6orf132;nc|nan|Q5T0Z8-4|C6orf132	106.68306549817024	0.032382560583716295	4				NaN	NaN	0	NaN	9899	3605	13504
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13507	34.946	NaN	14103	30	0	1313.8	0.106	+			11505	FPDKPITQY	9	91	554.7869747924786	1107.5593966517572	2	554.7872314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FPDKPITQY_	ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656-2|DDOST;nc|ENSG00000244038|P39656-3|DDOST;nc|ENSG00000244038|P39656|DDOST	82.7504851949679	0.08565546331141553	4				NaN	NaN	0	NaN	9900	3605	13504
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13508	34.948	NaN	7723.2	30	0	2013.6	0.106				-1	 	0	77	597.3054594267841	1192.596365920368	2	597.3060913085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9901	3605	13504
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13509	34.95	NaN	7079.3	30	0	2884.2	0.106			+	-1	VMSPPAMLVKA	11	63	387.21190941555443	1158.6138988468633	3	387.2120361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_VMSPPAM(Oxidation (M))LVKA_	REV__ENSG00000132953|ENST00000255305|XPO4;REV__ENST00000465018.1_1_13:21442666-21476877:-|nuORF;REV__ENST00000490513.1_1_13:21437227-21476877:-|nuORF;REV__XPO4|p.C1022Afs*8|1|0.21|ENSG00000132953|chr13:20787582-20787582|A/-|frameshift_variant	20.030474535948922	0.7766990143561855	4				NaN	NaN	0	NaN	9902	3605	13504
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13510	34.951	NaN	6935.7	30	0	556.4	0.037	+			33942	RSAPMDFALN	10	80	561.2731916336905	1120.531830334181	2	561.2739868164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RSAPMDFALN_	ARHGEF11|p.P1384Lfs*41|1|0.34|ENSG00000132694|chr1:156937418-156937418|G/-|frameshift_variant;ARHGEF11|p.P557Lfs*9|1|0.24|ENSG00000132694|chr1:156954900-156954900|G/-|frameshift_variant;ENSG00000132694|ENST00000368194|ARHGEF11;nc|ENSG00000132694|O15085|ARHGEF11	44.377184641726394	0.5088115166961078	4				NaN	NaN	0	NaN	9903	3605	13504
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13511	34.952	NaN	943.19	30	0	258.02	0.143	+			33357	RHLKCLLP	8	37	327.2011075432538	NaN	0	327.2012023925781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RHLKCLLP_	MSTB_dup6501|chr13:43061603-43061850:-|1.279567223268373|0.2367443632259002|2.43|470.0|9|3|sense	10.184766708764876	1.7418937515398478	4				NaN	NaN	0	NaN	9904	3605	13504
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13523	34.979	NaN	31380	30	0	8845.9	0.214	+			27270	MFGKKIKLY	9	90	564.3363310335735	1126.658109133947	2	564.3375244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MFGKKIKLY_	tr|U7SMP1|U7SMP1_FUSNUNodBhomologydomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01766PE=4SV=1	37.15910966729921	0.4535818937225704	4				NaN	NaN	0	NaN	9913	3608	13522
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13524	34.983	NaN	5842.8	30	0	542.72	0.106	+			7822	DPTSPATKY	9	72	490.2397736630934	978.4649943929868	2	490.2402038574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DPTSPATKY_	tr|U7T6T2|U7T6T2_FUSNUAutotransporterdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00158PE=4SV=1	42.396135135203025	0.392153681582562	4				NaN	NaN	0	NaN	9914	3608	13522
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13525	34.985	NaN	7438.4	30	0	2286.7	0.106	+			25282	LNSEYNLID	9	77	540.7636087388225	1079.512664544445	2	540.267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LNSEYNLID_	tr|U7SSS3|U7SSS3_FUSNUToxin-antitoxinsystemYwqKfamilyantitoxinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01474PE=4SV=1	44.377184641726394	0.36891676396732553	4				NaN	NaN	0	NaN	9915	3608	13522
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13526	34.987	NaN	5791.4	30	0	302.35	0.106			+	47611	VRVVTEPTVY	10	78	581.8258537755269	1161.6371546178536	2	581.827392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VRVVTEPTVY_	REV__CON__Q9N2I2	47.657333605630114	0.47858658696240314	4				NaN	NaN	0	NaN	9916	3608	13522
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13527	34.989	NaN	2896	30	0	609.72	0.106			+	9601	ELLIILMY	8	43	336.53426418257783	NaN	0	336.5342102050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ELLIILMY_	REV__ENST00000599328.1_1_19:53744649-53744913:-|nuORF	23.036711822280957	1.7418937515398478	4				NaN	NaN	0	NaN	9917	3608	13522
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13528	34.99	NaN	7777.6	30	0	1003.4	0.036	+			12593	GEHIIAGAGEL	11	71	533.7799900750625	1065.545427216925	2	533.7803955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GEHIIAGAGEL_	ENSG00000167658|ENST00000309311|EEF2	68.84614121027924	0.24535906747804975	4				NaN	NaN	0	NaN	9918	3608	13522
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13529	34.991	NaN	3158.1	30	0	412.41	0.139	+			45720	VAASLQALK	9	60	450.7786084366363	899.5426639400727	2	450.7790222167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VAASLQALK_	ENSG00000129493|ENST00000543095|HEATR5A;nc|ENSG00000129493|Q86XA9|HEATR5A	76.7741389293348	0.11149722112137898	4				NaN	NaN	0	NaN	9919	3608	13522
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13536	35.009	NaN	15361	30	0	4312.4	0.214	+			6910	CLVSYHVNM	9	80	561.756158157337	1121.497763381474	2	561.7568969726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_C(Carbamidomethyl (C))LVSYHVNM_	ENST00000519324.1_1_8:99264547-99306317:-|nuORF	74.25504064058377	0.12238981753128622	4				NaN	NaN	0	NaN	9923	3611	13535
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13537	35.013	NaN	9711.7	30	0	1270.7	0.106				-1	 	0	72	436.2710207699002	870.5274886066004	2	436.2713928222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9924	3611	13535
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13538	35.015	NaN	6992.5	30	0	760.13	0.106	+			10752	FAENGTVQY	9	72	514.7379105788056	NaN	0	514.73779296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FAENGTVQY_	ENSG00000100417|ENST00000216259|PMM1;ENST00000472620.5_1_22:41980283-41985061:-|nuORF;ENST00000478337.1_1_22:41980122-41985809:-|nuORF;ENST00000482178.5_1_22:41980283-41980722:-|nuORF;ENST00000485648.5_1_22:41980283-41985809:-|nuORF;PMM1|p.E103Sfs*6|1|0.05|ENSG00000100417|chr22:41584348-41584348|C/-|frameshift_variant	107.00750918261382	0.012399597248013027	4				NaN	NaN	0	NaN	9925	3611	13535
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13539	35.016	NaN	7811.9	30	0	547.38	0.106	+			6565	AYLDKSPQF	9	75	534.7713492185376	1067.528145503875	2	534.7725219726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AYLDKSPQF_	ENSG00000067248|ENST00000251636|DHX29;ENST00000504778.5_1_5:54552318-54579000:-|nuORF;ENST00000513447.1_1_5:54569247-54572159:-|nuORF	68.84614121027924	0.14577793175421136	4				NaN	NaN	0	NaN	9926	3611	13535
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13540	35.018	NaN	8233.8	30	0	728.07	0.106			+	13078	GFLQAFQKF	9	81	543.2923935817201	1084.5702342302402	2	543.7952270507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GFLQAFQKF_	REV__ENSG00000082512|ENST00000261464|TRAF5;REV__nc|ENSG00000082512|O00463-2|TRAF5;REV__nc|ENSG00000082512|O00463-3|TRAF5	33.51558372728122	0.4900267029546261	4				NaN	NaN	0	NaN	9927	3611	13535
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13541	35.02	NaN	7007.4	30	0	1004.8	0.106			+	32131	QSLLDLNKY	9	77	547.2963464873485	1092.578140041497	2	547.2987060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QSLLDLNKY_	REV__ENSG00000154710|ENST00000284957|RABGEF1;REV__nc|ENSG00000154710|Q9UJ41-3|RABGEF1;REV__nc|ENSG00000154710|Q9UJ41-4|RABGEF1	52.936696900407355	0.27249468807391813	4				NaN	NaN	0	NaN	9928	3611	13535
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13542	35.022	NaN	3050.4	30	0	751.71	0.035	+			20641	KGHFRRSP	8	49	328.8547257305596	983.5423477918789	3	328.85516357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KGHFRRSP_	ENST00000367240.6_1_1:203045582-203045954:+|nuORF;ENST00000594572.1_1_1:203045188-203045954:+|nuORF	14.664097394203935	0.7913966407026132	4				NaN	NaN	0	NaN	9929	3611	13535
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13553	35.046	NaN	26240	30	0	3539.3	0.214	+			7195	DAHPTLVTY	9	88	508.75497785816134	1015.4954027831227	2	508.7559509277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DAHPTLVTY_	ENSG00000165819|ENST00000298717|METTL3;ENST00000396522.6_1_14:21967741-21972178:-|nuORF;ENST00000536201.5_1_14:21969853-21979446:-|nuORF	76.7741389293348	0.11149722112137898	4				NaN	NaN	0	NaN	9937	3614	13552
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13554	35.049	NaN	16583	30	0	2202.1	0.106	+			42382	TAIRALETY	9	84	519.2848265139397	1036.5551000946793	2	519.28564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAIRALETY_	ELL2|p.H478Afs*4|1|0.2|ENSG00000118985|chr5:95898334-95898335|-/T|frameshift_variant;ELL2|p.K468Nfs*8|1|0.32|ENSG00000118985|chr5:95898361-95898361|T/-|frameshift_variant;ENSG00000118985|ENST00000237853|ELL2;ENST00000506628.1_1_5:95242411-95297425:-|nuORF;nc|ENSG00000118985|O00472-2|ELL2	70.39856735676683	0.13906523160059378	4				NaN	NaN	0	NaN	9938	3614	13552
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13555	35.051	NaN	3464.6	30	0	368.01	0.106			+	9530	ELARLALQ	8	55	457.2765180013152	NaN	0	457.2766418457031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ELARLALQ_	REV__ENSG00000104518|ENST00000262580|GSDMD;REV__ENST00000524846.5_1_8:144643499-144644514:+|nuORF;REV__ENST00000531184.5_1_8:144643499-144645071:+|nuORF;REV__GSDMD|p.R321Q|1|0.54|ENSG00000104518|chr8:143562097-143562097|G/A|missense_variant	64.20726635412375	1.7418937515398478	4				NaN	NaN	0	NaN	9939	3614	13552
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13556	35.053	NaN	5029.2	30	0	441.31	0.106	+			20493	KEYVGIVRL	9	73	538.8264188547457	1075.6382847762914	2	538.827392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEYVGIVRL_	ENSG00000130826|ENST00000369550|DKC1;nc|ENSG00000130826|O60832-2|DKC1	60.11826168202944	0.21262886028301267	4				NaN	NaN	0	NaN	9940	3614	13552
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13557	35.055	NaN	2161.7	30	0	195.66	0.106	+			46183	VDVSVPKV	8	54	421.75228017978884	841.4900074263777	2	421.7522277832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VDVSVPKV_	AHNAK|p.K2311Rfs*11|1|0.33|ENSG00000124942|chr11:62527487-62527487|G/-|frameshift_variant;AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;AHNAK|p.L2124Ifs*37|1|0.04|ENSG00000124942|chr11:62528048-62528049|-/ATGCCTGATA|frameshift_variant;AHNAK|p.S1888Qfs*8|1|0.11|ENSG00000124942|chr11:62528755-62528756|-/G|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK	64.20726635412375	0.4601301477144759	4				NaN	NaN	0	NaN	9941	3614	13552
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13558	35.057	NaN	3580.7	30	0	279.3	0.037	+			51234	YPVKYTQTF	9	76	573.7938513826558	1145.5731498321115	2	573.7960205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YPVKYTQTF_	ENSG00000112378|ENST00000421351|PERP	68.78682469695295	0.14603441672067394	4				NaN	NaN	0	NaN	9942	3614	13552
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13559	35.057	NaN	2948.7	30	0	228.97	0.146	+			51582	YYLNDILVEA	10	52	404.8771091436271	1211.6094980310813	3	404.8778381347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YYLNDILVEA_	tr|U7T2Z5|U7T2Z5_FUSNUAdenylate-formingenzymeOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00518PE=4SV=1	22.579656572578934	0.6954366826851017	4				NaN	NaN	0	NaN	9943	3614	13552
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13570	35.083	NaN	9342.7	30	0	845.17	0.214			+	18414	ISAETLNVI	9	90	480.2752981251088	958.5360433170176	2	480.2752990722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ISAETLNVI_	REV__ENSG00000170927|ENST00000371117|PKHD1;REV__nc|ENSG00000170927|P08F94-2|PKHD1;REV__PKHD1|p.F1531Lfs*61|1|0.39|ENSG00000170927|chr6:52025217-52025217|A/-|frameshift_variant;REV__PKHD1|p.H2893Pfs*2|1|0.4|ENSG00000170927|chr6:51754903-51754904|-/G|frameshift_variant;REV__PKHD1|p.P1545Qfs*47|1|0.37|ENSG00000170927|chr6:52025176-52025176|G/-|frameshift_variant	90.36981228632155	0.0638227155548745	4				NaN	NaN	0	NaN	9951	3617	13569
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13571	35.086	NaN	10590	30	0	1757.4	0.106	+			10252	ETLAPIKR	8	74	464.2845771819652	926.5546014307304	2	464.7763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ETLAPIKR_	ENST00000259895.8_1_6:30876031-30876811:+|nuORF;ENST00000376316.5_1_6:30876031-30877229:+|nuORF;REV__ENSG00000113163|ENST00000643780|CERT1;REV__nc|ENSG00000113163|Q9Y5P4-2|CERT1;REV__nc|ENSG00000113163|Q9Y5P4-3|CERT1	65.80317337860623	0.44433089765398776	4				NaN	NaN	0	NaN	9952	3617	13569
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13572	35.088	NaN	5489.9	30	0	439.42	0.106	+			10078	ESILVRNL	8	75	472.281799699457	942.549046465714	2	472.2813415527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ESILVRNL_	ZNF420|p.K361Nfs*214|1|0.5|ENSG00000197050|chr19:37128070-37128070|A/-|frameshift_variant	90.36981228632155	0.27635063874291205	4				NaN	NaN	0	NaN	9953	3617	13569
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13573	35.09	NaN	2307	30	0	312.49	0.106				-1	 	0	72	602.7953981864806	1203.5762434397611	2	602.7957763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9954	3617	13569
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13574	35.092	NaN	6212.4	30	0	500.84	0.106	+			50782	YEMEVSQRL	9	78	577.7784305411984	1153.5423081491967	2	577.7796630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YEMEVSQRL_	ENSG00000102910|ENST00000285737|LONP2;LONP2|p.D678Efs*7|1|0.07|ENSG00000102910|chr16:48347601-48347602|-/GT|frameshift_variant;nc|ENSG00000102910|Q86WA8-2|LONP2	59.93077597824379	0.21419174904018318	4				NaN	NaN	0	NaN	9955	3617	13569
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13575	35.094	NaN	2597.7	30	0	443.24	0.037			+	13549	GLSLYDEEPGS	11	75	583.7624297056242	1165.5103064780483	2	583.7627563476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GLSLYDEEPGS_	REV__ENSG00000172403|ENST00000307142|SYNPO2;REV__nc|ENSG00000172403|Q9UMS6-3|SYNPO2;REV__nc|ENSG00000172403|Q9UMS6-4|SYNPO2;REV__nc|ENSG00000172403|Q9UMS6-5|SYNPO2;REV__nc|ENSG00000172403|Q9UMS6|SYNPO2	45.97224482568171	0.4762245054624163	4				NaN	NaN	0	NaN	9956	3617	13569
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13576	35.094	NaN	3902.6	30	0	569.77	0.141			+	10503	EVTAPLYR	8	69	474.7601349544192	947.5057169756384	2	475.7593078613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EVTAPLYR_	REV__ENSG00000101435|ENST00000376979|CST9L	33.51558372728122	0.7005509609380386	4				NaN	NaN	0	NaN	9957	3617	13569
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13585	35.116	NaN	26330	30	0	6630	0.214			+	39847	STLLPLQR	8	78	464.2845771819652	926.5546014307304	2	464.2846984863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STLLPLQR_	REV__ENSG00000165271|ENST00000297990|NOL6;REV__nc|ENSG00000165271|Q9H6R4-2|NOL6;REV__nc|ENSG00000165271|Q9H6R4-4|NOL6;REV__NOL6|p.Q953Kfs*32|4|0.2|ENSG00000165271|chr9:33464084-33464084|G/-|frameshift_variant	76.84663266511073	0.3498490246073164	4				NaN	NaN	0	NaN	9963	3620	13584
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13586	35.12	NaN	12959	30	0	8274.1	0.106				-1	 	0	58	379.20939412819894	756.4042353231979	2	379.20965576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9964	3620	13584
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13587	35.122	NaN	7080.8	30	0	914.06	0.106	+			1189	AENPGKYNIL	10	80	559.7953679663443	1117.5761829994885	2	559.7964477539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AENPGKYNIL_	ENSG00000153187|ENST00000640218|HNRNPU;nc|ENSG00000153187|Q00839-2|HNRNPU	78.26377905018397	0.20980573808910843	4				NaN	NaN	0	NaN	9965	3620	13584
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13588	35.124	NaN	11261	30	0	3098.5	0.106	+			8530	EAVDTGRVL	9	80	480.26182475598426	NaN	0	480.2619323730469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EAVDTGRVL_	CSPG4|p.E1665Sfs*10|1|0.39|ENSG00000173546|chr15:75677845-75677845|G/-|frameshift_variant;ENSG00000173546|ENST00000308508|CSPG4	79.45101966838831	0.07326487554222888	4				NaN	NaN	0	NaN	9966	3620	13584
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13589	35.125	NaN	7879.9	30	0	614.61	0.106	+			42831	TECVKQICL	9	80	547.2721022653564	1092.5296515975126	2	547.2734985351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_TEC(Carbamidomethyl (C))VKQICL_	ENSG00000169564|ENST00000303577|PCBP1	69.6276240434122	0.14239879520340665	4				NaN	NaN	0	NaN	9967	3620	13584
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13590	35.127	NaN	6049.1	30	0	913.78	0.106	+			24221	LESAAARRA	9	70	472.76782778404447	NaN	0	472.7685241699219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LESAAARRA_	ENST00000484662.1_1_1:78445136-78445292:+|nuORF	76.7741389293348	0.08243745921263976	4				NaN	NaN	0	NaN	9968	3620	13584
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13591	35.129	NaN	3801.1	30	0	219.09	0.037			+	23696	LATIEEEHNK	10	69	592.3004901267554	1182.5864273203108	2	592.3019409179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LATIEEEHNK_	REV__CON__P19001	37.81151784470057	0.569310847604193	4				NaN	NaN	0	NaN	9969	3620	13584
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13604	35.156	NaN	57083	30	0	4379.1	0.214	+			45551	TYLEKAIKI	9	99	539.8284082624377	1077.6422635916754	2	539.829345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TYLEKAIKI_	ENSG00000187555|ENST00000344836|USP7;ENST00000565455.5_1_16:8987857-9023250:-|nuORF;nc|ENSG00000187555|Q93009-3|USP7;USP7|p.R1090H|1|0.23|ENSG00000187555|chr16:8894038-8894038|C/T|missense_variant	139.38205640894643	0.01076996779551382	4				NaN	NaN	0	NaN	9979	3623	13603
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13605	35.16	NaN	34991	30	0	3993.6	0.106	+			12808	GEMKSGVPVL	10	96	508.77614481044014	1015.5377366876803	2	508.7760009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEMKSGVPVL_	ENSG00000150593|ENST00000280154|PDCD4;ENST00000462577.5_1_10:112645037-112653861:+|nuORF;nc|ENSG00000150593|Q53EL6-2|PDCD4	76.16968421966216	0.22691431239609447	4				NaN	NaN	0	NaN	9980	3623	13603
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13606	35.162	NaN	48430	30	0	14197	0.106				-1	 	0	97	360.2212858758349	1077.6420282277047	3	360.2217102050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9981	3623	13603
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13607	35.164	NaN	13667	30	0	2606.1	0.106	+			17900	IGFLENKI	8	62	467.27267229432755	932.5307916554551	2	467.27362060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IGFLENKI_	ENST00000502444.1_1_4:122782546-122791468:-|nuORF	42.47446043378293	0.6409579893742323	4				NaN	NaN	0	NaN	9982	3623	13603
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13608	35.166	NaN	18310	30	0	1622.3	0.106	+			25307	LPAPPTQNM	9	88	484.7479088909357	967.4812648486715	2	484.74688720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LPAPPTQNM_	ENSG00000141380|ENST00000415083|SS18;ENSG00000184402|ENST00000331758|SS18L1;nc|ENSG00000141380|Q15532-2|SS18;nc|ENSG00000184402|O75177-2|SS18L1;nc|ENSG00000184402|O75177-5|SS18L1;SS18|p.G113Vfs*11|1|0.35|ENSG00000141380|chr18:26057636-26057636|C/-|frameshift_variant	104.74654710444128	0.034358562718640136	4				NaN	NaN	0	NaN	9983	3623	13603
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13609	35.167	NaN	8223.2	30	0	1179.2	0.035	+			4243	ATGDMSGLLK	10	81	496.75707910124015	991.4996052692803	2	496.7574157714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATGDMSGLLK_	ENSG00000127837|ENST00000248450|AAMP;ENST00000475678.5_1_2:219131145-219134809:-|nuORF;ENST00000489767.5_1_2:219130391-219134818:-|nuORF	81.52500206392136	0.18316182710238588	4				NaN	NaN	0	NaN	9984	3623	13603
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13610	35.168	NaN	52432	30	0	8663.6	0.141	+			24117	LEKRLTLEP	9	92	549.8289189078956	1097.6432848825912	2	549.8301391601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LEKRLTLEP_	ENSG00000128881|ENST00000267890|TTBK2;nc|ENSG00000128881|Q6IQ55-2|TTBK2;nc|ENSG00000128881|Q6IQ55-3|TTBK2;TTBK2|p.N876Kfs*2|2|0.34|ENSG00000128881|chr15:42752618-42752619|-/T|frameshift_variant	112.41091882917199	0.026537921851008135	4				NaN	NaN	0	NaN	9985	3623	13603
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13622	35.195	NaN	51743	30	0	9185.4	0.214				-1	 	0	86	537.2570908134915	1072.4996286937828	2	537.258056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9994	3626	13621
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13623	35.199	NaN	61039	30	0	6170.3	0.106	+			12758	GELGNGNIKL	10	93	507.78104745671754	1013.5475419802351	2	507.7824401855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GELGNGNIKL_	ENSG00000132646|ENST00000379143|PCNA	146.78539889680295	0.009066311176022962	4				NaN	NaN	0	NaN	9995	3626	13621
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13624	35.201	NaN	18121	30	0	2209.5	0.106	+			40524	STYYGSFVTR	10	76	590.7848726908134	1179.5551924484266	2	590.785400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STYYGSFVTR_	EIF3H|p.S183Pfs*5|1|0.05|ENSG00000147677|chr8:116657225-116657225|A/-|frameshift_variant;ENSG00000147677|ENST00000521861|EIF3H;ENST00000517974.1_1_8:117671049-117768052:-|nuORF;ENST00000518034.5_1_8:117671049-117768048:-|nuORF	174.8648734531126	0.002138720898421076	4				NaN	NaN	0	NaN	9996	3626	13621
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13625	35.203	NaN	6935.9	30	0	1169.7	0.106	+			16361	HENDTIYSL	9	77	546.2532803678608	1090.4920078025216	2	546.254150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HENDTIYSL_	ENSG00000162365|ENST00000371891|CYP4A22;nc|ENSG00000162365|Q5TCH4-2|CYP4A22	44.377184641726394	0.36891676396732553	4				NaN	NaN	0	NaN	9997	3626	13621
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13626	35.204	NaN	8793	30	0	571.92	0.106	+			36234	SEMDTSVKF	9	80	522.2387442804238	1042.4629356276475	2	522.2396240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SEMDTSVKF_	ENSG00000138448|ENST00000261023|ITGAV;ENST00000460641.1_1_2:187529903-187532515:+|nuORF;ITGAV|p.V806Hfs*11|1|0.07|ENSG00000138448|chr2:186667758-186667759|-/CATTTTCAAAA|frameshift_variant;nc|ENSG00000138448|P06756-2|ITGAV;nc|ENSG00000138448|P06756-3|ITGAV	60.11826168202944	0.21262886028301267	4				NaN	NaN	0	NaN	9998	3626	13621
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13627	35.206	NaN	7896.2	30	0	680.36	0.035			+	11230	FIGKSFPLK	9	81	518.8125499065814	1035.6105468799626	2	518.8130493164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FIGKSFPLK_	REV__DOCK4|p.K1325Nfs*6|1|0.17|ENSG00000128512|chr7:111765136-111765136|T/-|frameshift_variant;REV__ENSG00000128512|ENST00000428084|DOCK4;REV__ENST00000476846.1_7:111503332-111846439:-|nuORF;REV__nc|ENSG00000128512|Q8N1I0-2|DOCK4;REV__nc|ENSG00000128512|Q8N1I0|DOCK4	27.882242232435846	0.5426732730940306	4				NaN	NaN	0	NaN	9999	3626	13621
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13628	35.207	NaN	5516.4	30	0	1169.4	0.139			+	26271	LSTILQLQ	8	61	458.27861427622884	914.5426756192577	2	458.2789001464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSTILQLQ_	REV__ENSG00000187164|ENST00000355371|SHTN1;REV__nc|ENSG00000187164|A0MZ66-2|SHTN1;REV__nc|ENSG00000187164|A0MZ66-3|SHTN1;REV__nc|ENSG00000187164|A0MZ66-4|SHTN1	82.24051045832904	0.30490469762271794	4				NaN	NaN	0	NaN	10000	3626	13621
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13639	35.232	NaN	49670	30	0	8159.6	0.214				-1	 	0	84	460.25275631609117	918.4909596989824	2	460.2533874511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10008	3629	13638
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13640	35.236	NaN	14865	30	0	2011	0.106			+	13209	GIFGTVGAIV	10	80	467.27267229432755	932.5307916554551	2	467.7723693847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GIFGTVGAIV_	REV__ENSG00000198513|ENST00000358385|ATL1;REV__nc|ENSG00000198513|Q8WXF7-2|ATL1	47.91560031466742	0.4762067885998563	4				NaN	NaN	0	NaN	10009	3629	13638
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13641	35.238	NaN	27686	30	0	2728.4	0.106	+			45959	VASPSPSGSVL	11	86	500.7683502970243	999.5221476608486	2	500.76922607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VASPSPSGSVL_	ENSG00000160194|ENST00000354250|NDUFV3	101.25262130126117	0.05809749477734788	4				NaN	NaN	0	NaN	10010	3629	13638
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13642	35.24	NaN	8598.7	30	0	1451.9	0.106			+	8658	EDRVLFGL	8	84	474.7601349544192	947.5057169756384	2	474.76092529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EDRVLFGL_	REV__ENSG00000105483|ENST00000651546|CARD8;REV__ENST00000377461.8_1_19:48718626-48735356:-|nuORF;REV__ENST00000517510.5_1_19:48707456-48744240:-|nuORF;REV__ENST00000522051.5_1_19:48714969-48735770:-|nuORF;REV__ENST00000522773.5_1_19:48714969-48736545:-|nuORF;REV__nc|ENSG00000105483|Q9Y2G2-1|CARD8;REV__nc|ENSG00000105483|Q9Y2G2-2|CARD8;REV__nc|ENSG00000105483|Q9Y2G2-3|CARD8;REV__nc|ENSG00000105483|Q9Y2G2-4|CARD8;REV__nc|ENSG00000105483|Q9Y2G2-7|CARD8	53.351449002276354	0.5676011784961348	4				NaN	NaN	0	NaN	10011	3629	13638
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13643	35.241	NaN	10912	30	0	1654.3	0.106	+			46350	VEKPSPLTL	9	74	492.2924299072436	982.5703068812873	2	492.2926940917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VEKPSPLTL_	ENSG00000129083|ENST00000439561|COPB1	63.53385203322761	0.18415635464017938	4				NaN	NaN	0	NaN	10012	3629	13638
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13644	35.243	NaN	11529	30	0	1619.5	0.035			+	23590	LAMQQPHSL	9	76	512.7653144458106	1023.5160759584213	2	512.7694091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LAMQQPHSL_	REV__ENSG00000137076|ENST00000314888|TLN1;REV__nc|ENSG00000137076|Q9Y490-2|TLN1	52.936696900407355	0.27249468807391813	4				NaN	NaN	0	NaN	10013	3629	13638
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13645	35.244	NaN	9958.2	30	0	775.1	0.139				-1	 	0	82	487.26867340495704	486.26139693835705	1	487.2691650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10014	3629	13638
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13654	35.266	NaN	134550	30	0	8031.5	0.146	+			26905	LYADVGGKQF	10	90	549.2844077172863	1096.5542625013725	2	549.284912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LYADVGGKQF_	ENSG00000180879|ENST00000370086|SSR4;ENST00000460616.5_1_X:153061851-153063636:+|nuORF;ENST00000485612.5_1_X:153061851-153063885:+|nuORF	126.24258497203832	0.01851300475414303	4				NaN	NaN	0	NaN	10020	3632	13653
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13655	35.268	NaN	27517	30	0	2828.9	0.106				-1	 	0	76	566.7700289134316	1131.525504893663	2	566.7713012695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10021	3632	13653
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13656	35.27	NaN	10221	30	0	1284.4	0.106	+			923	AEIEQYRL	8	80	511.26815388295466	1020.5217548327093	2	511.269287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEIEQYRL_	ENSG00000136888|ENST00000374050|ATP6V1G1	98.62937762414208	0.25143494708580966	4				NaN	NaN	0	NaN	10022	3632	13653
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13657	35.272	NaN	11306	30	0	1533.9	0.106				-1	 	0	79	489.269876662955	976.5252003927101	2	489.2702331542969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10023	3632	13653
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13658	35.274	NaN	9801.2	30	0	947.53	0.106	+			51229	YPVEIHEY	8	82	525.2508615179476	1048.487170102695	2	525.250732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YPVEIHEY_	C1D|p.W68Gfs*16|1|0.11|ENSG00000197223|chr2:68046347-68046347|A/-|frameshift_variant;ENSG00000197223|ENST00000410067|C1D;ENST00000485709.1_1_2:68273401-68290109:-|nuORF	85.35947970620816	0.2915182781752196	4				NaN	NaN	0	NaN	10024	3632	13653
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13659	35.275	NaN	6447.6	30	0	1224.4	0.106				-1	 	0	72	455.78906490170067	909.5635768702014	2	455.7894592285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10025	3632	13653
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13660	35.277	NaN	7184.5	30	0	830.08	0.036	+			26494	LTMGQLYEK	9	82	541.7802926106373	1081.5460322880745	2	541.7816162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LTMGQLYEK_	ENSG00000034713|ENST00000037243|GABARAPL2	58.2462437865262	0.22823408064396822	4				NaN	NaN	0	NaN	10026	3632	13653
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13668	35.297	NaN	30971	30	0	2343.3	0.214	+			24092	LEKIADPTL	9	94	500.2879703555184	998.5613877778368	2	500.2894287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LEKIADPTL_	ENSG00000179889|ENST00000396410|PDXDC1;ENST00000530079.5_1_16:70072981-70099679:-|nuORF;ENST00000531894.5_1_16:70030360-70099817:-|nuORF;ENST00000533264.5_1_16:70069634-70099679:-|nuORF;ENST00000570001.5_1_16:15069056-15125764:+|nuORF;nc|ENSG00000179889|Q6P996-2|PDXDC1;nc|ENSG00000179889|Q6P996-4|PDXDC1;nc|ENSG00000179889|Q6P996-5|PDXDC1;nc|ENSG00000255185|Q6P474|PDXDC2P;PDXDC1|p.P706Tfs*3|1|0.06|ENSG00000179889|chr16:15036023-15036024|-/A|frameshift_variant	101.45984612302182	0.0377122763612125	4				NaN	NaN	0	NaN	10031	3635	13667
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13669	35.301	NaN	16745	30	0	1476.8	0.106	+			11506	FPDKPITQY	9	97	554.7869747924786	1107.5593966517572	2	554.7875366210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FPDKPITQY_	ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656-2|DDOST;nc|ENSG00000244038|P39656-3|DDOST;nc|ENSG00000244038|P39656|DDOST	89.02883481214508	0.06760336634167786	4				NaN	NaN	0	NaN	10032	3635	13667
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13670	35.303	NaN	15852	30	0	1426.9	0.106			+	-1	PMFVSIVCL	9	77	512.7653144458106	1023.5160759584213	2	513.2666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_PM(Oxidation (M))FVSIVCL_	REV__ENSG00000138449|ENST00000261024|SLC40A1;REV__SLC40A1|p.L398Wfs*55|1|0.2|ENSG00000138449|chr2:189563794-189563794|G/-|frameshift_variant	50.0245360154114	0.3026755932229825	4				NaN	NaN	0	NaN	10033	3635	13667
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13671	35.304	NaN	8340.7	30	0	2023.3	0.106			+	31605	QLVGAPLTK	9	64	463.786841869887	NaN	0	463.7867431640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QLVGAPLTK_	REV__DCANP1|p.R82Q|1|0.29|ENSG00000251380|chr5:135446864-135446864|C/T|missense_variant	56.72105179125745	0.16330365735109603	4				NaN	NaN	0	NaN	10034	3635	13667
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13672	35.306	NaN	7983.9	30	0	4619.3	0.106				-1	 	0	63	452.2513608451792	902.4881687571584	2	452.25177001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10035	3635	13667
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13673	35.308	NaN	6896.1	30	0	931.79	0.035				-1	 	0	79	504.25186392889515	503.24458746229516	1	504.25311279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10036	3635	13667
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13674	35.309	NaN	5530.3	30	0	1102.8	0.138	+			834	AEGFVRAL	8	53	431.7421702176007	861.4697875020014	2	431.74237060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AEGFVRAL_	ENSG00000177606|ENST00000371222|JUN;JUN|p.R257Kfs*53|1|0.31|ENSG00000177606|chr1:58782301-58782302|-/T|frameshift_variant	66.42927471994793	0.4381325844043345	4				NaN	NaN	0	NaN	10037	3635	13667
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13685	35.334	NaN	53539	30	0	5959.9	0.214	+			28284	NEASVLHNL	9	103	498.7585212409348	995.5024895486696	2	498.7586669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NEASVLHNL_	ENSG00000078814|ENST00000262873|MYH7B;ENSG00000100345|ENST00000216181|MYH9;ENSG00000105357|ENST00000642316|MYH14;ENSG00000133026|ENST00000360416|MYH10;ENSG00000133392|ENST00000300036|MYH11;MYH10|p.A411Pfs*11|1|0.15|ENSG00000133026|chr17:8546562-8546562|T/-|frameshift_variant;MYH14|p.G549Wfs*8|1|0.23|ENSG00000105357|chr19:50250519-50250520|-/C|frameshift_variant;MYH14|p.L1950Sfs*14|1|0.34|ENSG00000105357|chr19:50309646-50309646|C/-|frameshift_variant;MYH14|p.M997*|1|0.19|ENSG00000105357|chr19:50271483-50271483|A/-|frameshift_variant;MYH14|p.P548Lfs*25|2|0.32|ENSG00000105357|chr19:50250520-50250520|C/-|frameshift_variant;MYH14|p.R929Gfs*44|1|0.38|ENSG00000105357|chr19:50268237-50268237|G/-|frameshift_variant;MYH9|p.C91Y|1|0.25|ENSG00000100345|chr22:36348965-36348965|C/T|missense_variant;MYH9|p.I784*|1|0.07|ENSG00000100345|chr22:36304036-36304036|G/-|frameshift_variant;nc|ENSG00000078814|A7E2Y1-2|MYH7B;nc|ENSG00000078814|A7E2Y1|MYH7B;nc|ENSG00000105357|Q7Z406-4|MYH14;nc|ENSG00000105357|Q7Z406-5|MYH14;nc|ENSG00000105357|Q7Z406-6|MYH14;nc|ENSG00000105357|Q7Z406|MYH14;nc|ENSG00000133026|P35580-2|MYH10;nc|ENSG00000133026|P35580-3|MYH10;nc|ENSG00000133026|P35580-5|MYH10;nc|ENSG00000133026|P35580|MYH10;nc|ENSG00000133392|P35749-2|MYH11;nc|ENSG00000133392|P35749-3|MYH11;nc|ENSG00000133392|P35749-4|MYH11	154.1183686248401	0.005909203230691971	4				NaN	NaN	0	NaN	10045	3638	13684
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13686	35.338	NaN	16256	30	0	4390.9	0.106			+	10024	ERTSRPLRI	9	82	564.3363310335735	1126.658109133947	2	564.33740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ERTSRPLRI_	REV__ENST00000542454.2_2_14:96671156-96704150:+|nuORF	49.44154591367651	0.3095138337212152	4				NaN	NaN	0	NaN	10046	3638	13684
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13687	35.34	NaN	14284	30	0	2780.7	0.106	+			46879	VIMNSLITK	9	92	509.80138966435385	1017.5882263955077	2	509.80181884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VIMNSLITK_	ENSG00000122203|ENST00000298569|KIAA1191;KIAA1191|p.K274Qfs*18|1|0.61|ENSG00000122203|chr5:176347698-176347699|-/G|frameshift_variant;nc|ENSG00000122203|Q96A73-2|KIAA1191	63.42647028704847	0.1850514934184437	4				NaN	NaN	0	NaN	10047	3638	13684
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13688	35.341	NaN	12878	30	0	1183.5	0.106	+			2517	APVGGHILSY	10	89	507.2737324735464	NaN	0	507.2742919921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_APVGGHILSY_	ENSG00000197879|ENST00000648651|MYO1C;nc|ENSG00000197879|O00159-2|MYO1C;nc|ENSG00000197879|O00159-3|MYO1C	82.30502934623384	0.08811875868106066	4				NaN	NaN	0	NaN	10048	3638	13684
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13689	35.343	NaN	12872	30	0	1090.4	0.106	+			713	AEASMISKL	9	90	475.2545787489735	948.494604564747	2	475.25494384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEASMISKL_	ENSG00000055130|ENST00000325222|CUL1	101.45984612302182	0.0377122763612125	4				NaN	NaN	0	NaN	10049	3638	13684
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13690	35.345	NaN	7375.1	30	0	1168.8	0.106	+			49024	VVGPWIQTK	9	79	514.2997649685818	1026.5849770039636	2	514.3001708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VVGPWIQTK_	ENSG00000130402|ENST00000252699|ACTN4;nc|ENSG00000130402|O43707-2|ACTN4;nc|ENSG00000130402|O43707-3|ACTN4	47.95952297671804	0.32689736945648856	4				NaN	NaN	0	NaN	10050	3638	13684
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13691	35.347	NaN	9936.3	30	0	2177.8	0.035	+			48726	VTVAAETVLAA	11	81	522.7993295614185	1043.584106189637	2	522.8003540039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VTVAAETVLAA_	ENST00000360415.7_1_7:65617938-65618154:+|nuORF	77.31757898189308	0.17473537675624723	4				NaN	NaN	0	NaN	10051	3638	13684
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13698	35.363	NaN	27894	30	0	6282	0.214				-1	 	0	78	487.2814007901035	972.548248647007	2	487.2816162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10055	3641	13697
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13699	35.367	NaN	21164	30	0	2895.4	0.106				-1	 	0	78	479.7995664934618	957.5845800537236	2	479.800048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10056	3641	13697
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13700	35.369	NaN	11365	30	0	1263.6	0.106	+			9044	EGFSDCLRY	9	87	545.2364049508307	1088.4582569684612	2	545.2376708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EGFSDCLRY_	ENST00000455858.2_2_12:117467953-117468139:+|nuORF	54.776311868738084	0.25715957988447635	4				NaN	NaN	0	NaN	10057	3641	13697
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13701	35.371	NaN	8775.2	30	0	1497.2	0.106	+			3064	ASFNDTFVH	9	75	519.2374524695401	1036.4603520058802	2	519.2380981445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASFNDTFVH_	ENSG00000164587|ENST00000407193|RPS14;ENST00000519690.1_1_5:149827146-149827347:-|nuORF	85.16082228582465	0.07850854922700509	4				NaN	NaN	0	NaN	10058	3641	13697
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13702	35.372	NaN	8845.5	30	0	724.76	0.106	+			9151	EGNELTKTLIK	11	86	623.3554566279961	1244.696360322792	2	623.3561401367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EGNELTKTLIK_	ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC;PRKDC|p.D2437Wfs*3|1|0.11|ENSG00000253729|chr8:47840161-47840162|-/CA|frameshift_variant;PRKDC|p.K3681Nfs*6|1|0.32|ENSG00000253729|chr8:47785174-47785177|TTCT/-|frameshift_variant;PRKDC|p.M3670*|1|0.5|ENSG00000253729|chr8:47785212-47785212|T/-|frameshift_variant;PRKDC|p.M3846Cfs*12|1|0.13|ENSG00000253729|chr8:47779047-47779047|T/-|frameshift_variant;PRKDC|p.M4020Cfs*2|1|0.31|ENSG00000253729|chr8:47776968-47776968|T/-|frameshift_variant;PRKDC|p.N3605Kfs*3|1|0.22|ENSG00000253729|chr8:47788993-47788994|-/T|frameshift_variant;PRKDC|p.N4037Ifs*15|1|0.17|ENSG00000253729|chr8:47776916-47776916|T/-|frameshift_variant;PRKDC|p.R2704Gfs*13|2|0.34|ENSG00000253729|chr8:47834238-47834238|T/-|frameshift_variant;PRKDC|p.S3402Ifs*16|1|0.04|ENSG00000253729|chr8:47799302-47799303|-/AAACCGTGAGTTAGAGGAGGTAA|frameshift_variant;PRKDC|p.S4099Qfs*6|1|0.25|ENSG00000253729|chr8:47774265-47774265|A/-|frameshift_variant;PRKDC|p.T3268Pfs*7|1|0.5|ENSG00000253729|chr8:47803426-47803426|T/-|frameshift_variant;PRKDC|p.W3401Cfs*4|1|0.01|ENSG00000253729|chr8:47799304-47799305|-/AATGAATA|frameshift_variant	91.26522074875469	0.0935951923676557	4				NaN	NaN	0	NaN	10059	3641	13697
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13703	35.374	NaN	3354.3	30	0	668.34	0.106	+			7939	DSKLSLVL	8	69	437.7652766841838	873.5160004351676	2	437.76568603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DSKLSLVL_	AHNAK2|p.E5149Gfs*8|1|0.32|ENSG00000185567|chr14:104940005-104940006|-/C|frameshift_variant;AHNAK2|p.E5446Gfs*7|1|0.32|ENSG00000185567|chr14:104939114-104939115|-/C|frameshift_variant;ENSG00000185567|ENST00000333244|AHNAK2;nc|ENSG00000185567|Q8IVF2-3|AHNAK2	63.30626980617807	0.4690498839812213	4				NaN	NaN	0	NaN	10060	3641	13697
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13704	35.376	NaN	3532.7	30	0	862.99	0.035	+			34968	SAALLKNKY	9	42	336.53426418257783	NaN	0	336.5342712402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SAALLKNKY_	tr|U7SWF0|U7SWF0_FUSNUAmidophosphoribosyltransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=purFPE=3SV=1	18.324413293986947	0.3749620627292244	4				NaN	NaN	0	NaN	10061	3641	13697
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13716	35.402	NaN	37279	30	0	7340.8	0.214	+			12463	GEDKTGIVY	9	86	491.24750735511594	980.4804617770319	2	491.247802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEDKTGIVY_	ITGAV|p.K400T|1|0.12|ENSG00000138448|chr2:186646725-186646725|A/C|missense_variant	87.75429964447693	0.0711966946989736	4				NaN	NaN	0	NaN	10070	3644	13715
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13717	35.405	NaN	11358	30	0	2541.6	0.106	+			12957	GESVTKLTL	9	86	474.27391971032404	946.5332864874481	2	474.27398681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GESVTKLTL_	ENSG00000116830|ENST00000369466|TTF2;ENST00000480701.1_1_1:117641440-117644143:+|nuORF;ENST00000492682.5_1_1:117640837-117644143:+|nuORF	70.8162118820467	0.13725933411854815	4				NaN	NaN	0	NaN	10071	3644	13715
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13718	35.407	NaN	13874	30	0	1294.9	0.106	+			28163	NAMNMQETY	9	75	551.2196940726609	1100.4248352121217	2	551.220947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NAMNMQETY_	ENSG00000114520|ENST00000251775|SNX4;ENST00000473417.5_1_3:125188296-125239016:-|nuORF	117.81106730687013	0.02252488733980868	4				NaN	NaN	0	NaN	10072	3644	13715
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13719	35.409	NaN	9781.8	30	0	2079.9	0.106			+	15879	GYRSPINTF	9	78	527.7688150675592	1053.5230772019183	2	527.7698364257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GYRSPINTF_	REV__ENSG00000152683|ENST00000282587|SLC30A6;REV__nc|ENSG00000152683|Q6NXT4-2|SLC30A6;REV__nc|ENSG00000152683|Q6NXT4-3|SLC30A6;REV__nc|ENSG00000152683|Q6NXT4-4|SLC30A6	60.11826168202944	0.21262886028301267	4				NaN	NaN	0	NaN	10073	3644	13715
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13720	35.411	NaN	3482.7	30	0	344.18	0.106	+			49477	VVYQYWNTK	9	75	600.8062528988313	NaN	0	600.8062744140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVYQYWNTK_	EMC1|p.F974Lfs*4|1|0.22|ENSG00000127463|chr1:19219363-19219363|A/-|frameshift_variant;ENSG00000127463|ENST00000477853|EMC1;nc|ENSG00000127463|Q8N766-2|EMC1;nc|ENSG00000127463|Q8N766-3|EMC1;nc|ENSG00000127463|Q8N766-4|EMC1	83.6470233535746	0.058886874190800687	4				NaN	NaN	0	NaN	10074	3644	13715
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13721	35.413	NaN	2326	30	0	850.52	0.03			+	15614	GVKHRGGRI	9	42	327.2011075432538	NaN	0	327.2016906738281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GVKHRGGRI_	REV__ENST00000269033.7_1_17:27957016-27957265:-|nuORF	19.996771675451527	0.3693019437812985	4				NaN	NaN	0	NaN	10075	3644	13715
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13722	35.413	NaN	2010.9	30	0	739.18	0.144			+	32851	RCSGLNQFIHM	11	49	653.3129163410671	1304.611279748934	2	653.3147583007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RCSGLNQFIHM_	REV__ENSG00000120436|ENST00000366834|GPR31	18.262085536374414	0.7849791996189919	4				NaN	NaN	0	NaN	10076	3644	13715
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13734	35.44	NaN	10545	30	0	1274.2	0.214	+			50619	YEAELRTTL	9	76	548.2871232186258	1094.5596935040514	2	548.2881469726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YEAELRTTL_	ENSG00000232629|ENST00000437316|HLA-DQB2;nc|ENSG00000232629|P05538-2|HLA-DQB2;nc|ENSG00000232629|P05538|HLA-DQB2	109.43880257439609	0.029570636687953285	4				NaN	NaN	0	NaN	10085	3647	13733
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13735	35.444	NaN	17398	30	0	5123.3	0.106				-1	 	0	85	522.7766772292514	1043.5388015253027	2	522.7772827148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10086	3647	13733
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13736	35.446	NaN	19830	30	0	6528.1	0.106				-1	YQFCFSNEF	9	81	414.50299695173	1240.48716145539	3	414.5035400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_YQFC(Carbamidomethyl (C))FSNEF_	ENSG00000166557|ENST00000299705|TMED3;nc|ENSG00000166557|Q9Y3Q3-2|TMED3	45.97224482568171	0.3502073465782774	4				NaN	NaN	0	NaN	10087	3647	13733
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13737	35.448	NaN	13544	30	0	1250.6	0.106	+			41097	SVINPGAIYR	10	98	545.3054212387043	1088.5962895442085	2	545.3067016601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVINPGAIYR_	ENSG00000115232|ENST00000397033|ITGA4;ENST00000465522.5_1_2:182322141-182350724:+|nuORF;ENST00000476089.1_1_2:182321937-182323202:+|nuORF;ENST00000484404.1_1_2:182322441-182339919:+|nuORF;ITGA4|p.T615Nfs*11|1|0.22|ENSG00000115232|chr2:181509798-181509799|-/A|frameshift_variant;nc|ENSG00000115232|P13612-2|ITGA4	75.04331003522576	0.23611669241777622	4				NaN	NaN	0	NaN	10088	3647	13733
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13738	35.45	NaN	8522.7	30	0	1092	0.106	+			23805	LCPLCRLPF	9	80	531.2859695259614	1060.5573861187227	2	531.28662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LCPLCRLPF_	ENSG00000158717|ENST00000312838|RNF166	60.29395666154354	0.21116425950210296	4				NaN	NaN	0	NaN	10089	3647	13733
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13739	35.451	NaN	8134	30	0	4395.7	0.038	+			45451	TWPCSFPMADS	11	69	621.2511533920326	1240.4877538508651	2	621.2518310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TWPCSFPMADS_	COQ6|p.P179S|1|0.21|ENSG00000119723|chr14:73958200-73958200|C/T|missense_variant	34.08650109265054	0.6322515996262609	4				NaN	NaN	0	NaN	10090	3647	13733
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13740	35.452	NaN	6285.2	30	0	670.82	0.141	+			42256	TAARAWAL	8	68	430.2422943170416	858.4700357008833	2	430.24261474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TAARAWAL_	ENSG00000244038|ENST00000602624|DDOST;ENST00000477229.1_1_1:20987242-20987843:-|nuORF;nc|ENSG00000244038|P39656-2|DDOST;nc|ENSG00000244038|P39656-3|DDOST;nc|ENSG00000244038|P39656|DDOST	102.7733458925114	0.2491487235419157	4				NaN	NaN	0	NaN	10091	3647	13733
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13747	35.47	NaN	21025	30	0	3339.4	0.214	+			41562	SVQETVLPIK	10	84	557.3288173047389	1112.6430816762777	2	557.329833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVQETVLPIK_	ENSG00000169057|ENST00000453960|MECP2;MECP2|p.E432Afs*3|1|0.03|ENSG00000169057|chrX:154030534-154030535|CC/-|frameshift_variant;MECP2|p.K449Sfs*33|1|0.2|ENSG00000169057|chrX:154030482-154030482|T/-|frameshift_variant;nc|ENSG00000169057|P51608|MECP2	150.81021883065287	0.008351675499118036	4				NaN	NaN	0	NaN	10095	3650	13746
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13748	35.474	NaN	19906	30	0	2193.1	0.106	+			4538	ATLAAVLQR	9	80	471.789591386585	941.56462983997	2	471.7899169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATLAAVLQR_	ENSG00000159399|ENST00000290573|HK2	148.98678547993487	0.0071052929883181565	4				NaN	NaN	0	NaN	10096	3650	13746
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13749	35.476	NaN	14245	30	0	1644.2	0.106	+			35942	SEGKCFSVL	9	84	513.7487613952346	1025.4829698572692	2	513.7499389648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SEGKC(Carbamidomethyl (C))FSVL_	ENSG00000079246|ENST00000392132|XRCC5;XRCC5|p.Q488Rfs*29|1|0.06|ENSG00000079246|chr2:216141305-216141305|C/-|frameshift_variant	62.107414245175825	0.1960472003779324	4				NaN	NaN	0	NaN	10097	3650	13746
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13750	35.478	NaN	8957.5	30	0	1236.8	0.106	+			39495	STFLSNTLK	9	76	505.77852278060135	1009.5424926280027	2	505.77947998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STFLSNTLK_	ENSG00000122482|ENST00000337393|ZNF644;nc|ENSG00000122482|Q9H582-2|ZNF644;ZNF644|p.K1068Lfs*15|1|0.05|ENSG00000122482|chr1:90937971-90937972|-/GTAG|frameshift_variant	75.04331003522576	0.118981335847003	4				NaN	NaN	0	NaN	10098	3650	13746
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13751	35.479	NaN	4226.4	30	0	281.11	0.106	+			19383	KAMAIKTDVDV	11	78	595.8254226093165	1189.636292285433	2	595.8264770507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KAMAIKTDVDV_	ENSG00000133302|ENST00000265140|SLF1	76.16968421966216	0.18430501143391895	4				NaN	NaN	0	NaN	10099	3650	13746
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13752	35.481	NaN	3714.6	30	0	987.93	0.106			+	27126	MAQPSERIQT	10	67	580.7888887239819	1159.5632245147638	2	580.7904052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MAQPSERIQT_	REV__ENSG00000168754|ENST00000490605|FAM178B;REV__ENST00000494172.1_1_2:97543530-97560824:-|nuORF;REV__nc|ENSG00000168754|Q8IXR5-2|FAM178B;REV__nc|ENSG00000168754|Q8IXR5-4|FAM178B	45.97224482568171	0.49411383603842696	4				NaN	NaN	0	NaN	10100	3650	13746
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13753	35.483	NaN	4332.8	30	0	904.3	0.033	+			23719	LAVEGGQSL	9	64	437.2370742301871	872.4595955271742	2	437.23724365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LAVEGGQSL_	ENSG00000104691|ENST00000265616|UBXN8;nc|ENSG00000104691|O00124-2|UBXN8;nc|ENSG00000104691|O00124-3|UBXN8;nc|ENSG00000104691|O00124|UBXN8	65.46538089061403	0.16805504838372562	4				NaN	NaN	0	NaN	10101	3650	13746
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13767	35.512	NaN	10481	30	0	1709.6	0.214	+			48339	VTGGIFSVTK	10	79	504.7895147652888	1007.5644765973776	2	504.7900085449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTGGIFSVTK_	ENSG00000151135|ENST00000280756|TMEM263	125.71293069911285	0.01926106323661889	4				NaN	NaN	0	NaN	10112	3653	13766
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13768	35.516	NaN	7214	30	0	1500	0.106	+			18045	IIQPNYPA	8	68	458.2498368590091	914.4851207848183	2	458.2501220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IIQPNYPA_	ENSG00000148824|ENST00000317502|MTG1;ENST00000460848.5_1_10:135215574-135233666:+|nuORF;ENST00000473735.1_1_10:135216152-135233666:+|nuORF	44.53106598305862	0.628196326904373	4				NaN	NaN	0	NaN	10113	3653	13766
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13769	35.517	NaN	4399.8	30	0	852.25	0.106	+			28159	NAMEDAQTL	9	67	496.72060344509686	991.4266539569937	2	496.7208251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NAMEDAQTL_	ENSG00000196975|ENST00000394295|ANXA4;nc|ENSG00000196975|P09525|ANXA4	58.2462437865262	0.22823408064396822	4				NaN	NaN	0	NaN	10114	3653	13766
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13770	35.519	NaN	6834.4	30	0	531.63	0.106			+	45531	TYIKLISAAV	10	80	539.8284082624377	1077.6422635916754	2	539.8292846679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TYIKLISAAV_	REV__UBXN6|p.M159L|1|0.18|ENSG00000167671|chr19:4448382-4448382|T/A|missense_variant	55.08391021199286	0.41055145962533396	4				NaN	NaN	0	NaN	10115	3653	13766
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13771	35.521	NaN	9617	30	0	3367.4	0.106	+			39700	STIPGIHILK	10	63	360.2239945003671	1077.6501541013013	3	360.5582580566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STIPGIHILK_	ENSG00000016490|ENST00000394711|CLCA1	32.75053402867276	0.6123771875927935	4				NaN	NaN	0	NaN	10116	3653	13766
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13772	35.523	NaN	2396.6	30	0	317.43	0.106	+			45800	VAHPATLI	8	50	411.24711326603904	820.4796735988781	2	411.2477111816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VAHPATLI_	tr|U7SSZ7|U7SSZ7_FUSNUMFStransporter,AGZAfamily,xanthine/uracilpermeaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01653PE=3SV=1	37.028477286268924	0.6747514403204248	4				NaN	NaN	0	NaN	10117	3653	13766
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13773	35.525	NaN	3299.6	30	0	522.02	0.037			+	-1	FLWSSHCCL	9	70	576.7521330451729	1151.4897131571456	2	576.7535400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_FLWSSHC(Carbamidomethyl (C))CL_	REV__ENST00000475941.1_1_22:20096259-20097628:+|nuORF	33.51558372728122	0.4900267029546261	4				NaN	NaN	0	NaN	10118	3653	13766
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13786	35.552	NaN	26838	30	0	3210.2	0.211			+	10235	ETIGILISH	9	86	491.781361158958	981.5481693847161	2	491.7815856933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ETIGILISH_	REV__ENSG00000185133|ENST00000331075|INPP5J;REV__ENST00000461241.1_1_22:31523357-31529733:+|nuORF;REV__nc|ENSG00000185133|Q15735-2|INPP5J;REV__nc|ENSG00000185133|Q15735-3|INPP5J	40.77816245573522	0.41113185337114944	4				NaN	NaN	0	NaN	10128	3656	13785
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13787	35.555	NaN	37552	30	0	6132	0.106				-1	 	0	65	379.20935354994356	756.4041541666871	2	379.20941162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10129	3656	13785
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13788	35.557	NaN	5176.7	30	0	509.29	0.106	+			4607	ATLLASNEAFK	11	68	582.8156204339613	1163.6166879347224	2	582.816650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATLLASNEAFK_	ENSG00000185825|ENST00000345046|BCAP31;nc|ENSG00000185825|P51572-2|BCAP31	112.2953585152457	0.03526820493220478	4				NaN	NaN	0	NaN	10130	3656	13785
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13789	35.559	NaN	6303.4	30	0	979.6	0.106	+			18016	IIIAEVVNK	9	69	499.8153006893981	997.6160484455962	2	499.8154602050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IIIAEVVNK_	ENSG00000128641|ENST00000392318|MYO1B;nc|ENSG00000128641|O43795-2|MYO1B	87.69643885390035	0.07135982304947239	4				NaN	NaN	0	NaN	10131	3656	13785
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13790	35.561	NaN	5189.8	30	0	403.6	0.106	+			28563	NKEVQELLE	9	74	551.2924573251148	1100.5703617170295	2	551.29345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NKEVQELLE_	ENSG00000136444|ENST00000258955|RSAD1;ENST00000513650.1_1_17:48561664-48562219:+|nuORF;ENST00000515221.2_1_17:48560779-48561997:+|nuORF	68.84614121027924	0.14577793175421136	4				NaN	NaN	0	NaN	10132	3656	13785
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13791	35.563	NaN	3527.5	30	0	361.7	0.106	+			13051	GEYAVHVL	8	61	444.23429620546744	886.4540394777349	2	444.2340087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GEYAVHVL_	ENSG00000196924|ENST00000369850|FLNA;FLNA|p.A1026Lfs*20|1|0.42|ENSG00000196924|chrX:154361439-154361439|C/-|frameshift_variant;FLNA|p.G2237Efs*109|1|0.28|ENSG00000196924|chrX:154352240-154352240|C/-|frameshift_variant;FLNA|p.Q1716Sfs*23|2|0.38|ENSG00000196924|chrX:154354896-154354896|G/-|frameshift_variant;FLNA|p.R2520Vfs*16|1|0.7|ENSG00000196924|chrX:154349560-154349560|G/-|frameshift_variant;nc|ENSG00000196924|P21333-2|FLNA	96.04771818265245	0.25916207331555047	4				NaN	NaN	0	NaN	10133	3656	13785
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13792	35.565	NaN	8017.3	30	0	1069.2	0.036	+			39901	STLTDSLVCK	10	77	533.7756355983217	1065.5367182634434	2	533.77587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STLTDSLVCK_	EEF2|p.E241Rfs*13|1|0.26|ENSG00000167658|chr19:3982316-3982316|C/-|frameshift_variant;ENSG00000167658|ENST00000309311|EEF2;ENST00000594885.1_1_19:3984132-3985378:-|nuORF	45.02220120713402	0.5028680121232791	4				NaN	NaN	0	NaN	10134	3656	13785
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13801	35.585	NaN	22945	30	0	2560.7	0.214	+			11725	FSEGGERLL	9	97	504.26108595988495	1006.5076189865699	2	504.2616882324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FSEGGERLL_	ENSG00000185650|ENST00000439696|ZFP36L1;ENST00000555997.1_1_14:69256252-69257717:-|nuORF;ZFP36L1|p.G271Vfs*36|1|0.32|ENSG00000185650|chr14:68789738-68789738|C/-|frameshift_variant;ZFP36L1|p.H177Tfs*56|1|0.79|ENSG00000185650|chr14:68790021-68790021|G/-|frameshift_variant;ZFP36L1|p.P274Rfs*33|1|0.26|ENSG00000185650|chr14:68789729-68789729|G/-|frameshift_variant;ZFP36L1|p.S294Afs*13|1|0.33|ENSG00000185650|chr14:68789671-68789671|G/-|frameshift_variant	104.42354056486148	0.0346881550498418	4				NaN	NaN	0	NaN	10140	3659	13800
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13802	35.588	NaN	11151	30	0	2309.4	0.106	+			13495	GLLVALVGAQ	10	66	470.7943494349899	939.5741459367798	2	470.7948913574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GLLVALVGAQ_	ENSG00000165215|ENST00000395145|CLDN3	76.84663266511073	0.2213837019327327	4				NaN	NaN	0	NaN	10141	3659	13800
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13803	35.59	NaN	10917	30	0	1127.4	0.106	+			36554	SFNTGSAVIY	10	88	529.7596553163063	1057.5047576994125	2	529.7604370117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SFNTGSAVIY_	ENSG00000196792|ENST00000357479|STRN3;nc|ENSG00000196792|Q13033-2|STRN3	51.19269402634007	0.44601001148513897	4				NaN	NaN	0	NaN	10142	3659	13800
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13804	35.592	NaN	4325.3	30	0	533.38	0.106			+	12926	GESKSPKTL	9	72	473.7631534525448	945.5117539718897	2	473.7637634277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GESKSPKTL_	REV__ENST00000359426.6_1_10:71128346-71129014:+|nuORF	42.396135135203025	0.392153681582562	4				NaN	NaN	0	NaN	10143	3659	13800
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13805	35.594	NaN	4656.8	30	0	450.12	0.106				-1	 	0	60	432.2523673338272	862.4901817344544	2	432.2528076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10144	3659	13800
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13806	35.596	NaN	9032.5	30	0	1221.6	0.106	+			23298	KYNDFGNSF	9	70	546.2427845632276	1090.471016193255	2	546.2445068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KYNDFGNSF_	ENSG00000166526|ENST00000299667|ZNF3;ENST00000487620.1_1_7:99668768-99673049:-|nuORF	96.0336014099291	0.047854655524928534	4				NaN	NaN	0	NaN	10145	3659	13800
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13807	35.598	NaN	8733.1	30	0	1323	0.034	+			551	ADFETVRM	8	76	484.7282932415031	967.4420335498062	2	484.7289733886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ADFETVRM_	ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2	131.03138772384656	0.22501736558723914	4				NaN	NaN	0	NaN	10146	3659	13800
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13815	35.617	NaN	27805	30	0	2949.1	0.214	+			4025	ATDAVGIVLK	10	85	493.79651347658034	985.5784740199607	2	493.7975769042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATDAVGIVLK_	ENSG00000132676|ENST00000368336|DAP3;ENST00000462978.1_1_1:155697409-155701908:+|nuORF;nc|ENSG00000132676|P51398-2|DAP3;nc|ENSG00000132676|P51398-3|DAP3	146.78539889680295	0.009066311176022962	4				NaN	NaN	0	NaN	10151	3662	13814
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13816	35.621	NaN	17674	30	0	3441.9	0.106				-1	 	0	67	440.7656865783671	879.5168202235342	2	440.76605224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10152	3662	13814
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13817	35.623	NaN	28107	30	0	3864.4	0.106			+	26288	LSTTLPSVY	9	91	490.7704819348477	979.5264109364954	2	490.7700500488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSTTLPSVY_	REV__ENSG00000197136|ENST00000355703|PCNX3;REV__ENST00000439247.2_1_11:65394334-65404446:+|nuORF;REV__nc|ENSG00000197136|Q9H6A9-3|PCNX3	50.0245360154114	0.3026755932229825	4				NaN	NaN	0	NaN	10153	3662	13814
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13818	35.625	NaN	15406	30	0	1946.9	0.106	+			1010	AEKLEALSV	9	79	480.27356155281774	958.5325701724355	2	480.27392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEKLEALSV_	ENSG00000099901|ENST00000430524|RANBP1;ENST00000435265.5_1_22:20114425-20114572:+|nuORF;ENST00000448394.2_1_22:20110177-20114572:+|nuORF;nc|ENSG00000099901|P43487-2|RANBP1;nc|ENSG00000099901|P43487|RANBP1	93.5975768576971	0.05472259948179787	4				NaN	NaN	0	NaN	10154	3662	13814
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13819	35.627	NaN	15987	30	0	1544.5	0.106	+			1382	AEVKGVYQF	9	74	520.7736181329565	1039.5326833327128	2	520.7744750976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEVKGVYQF_	ENSG00000166557|ENST00000299705|TMED3;nc|ENSG00000166557|Q9Y3Q3-2|TMED3	115.49404669440601	0.023927554121326553	4				NaN	NaN	0	NaN	10155	3662	13814
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13820	35.628	NaN	5902.9	30	0	787.25	0.106	+			18715	ITFFSSSSAK	10	76	537.7771114202748	1073.5396699073494	2	537.7783813476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ITFFSSSSAK_	ENST00000439559.2_1_10:89102840-89103146:+|nuORF;ENST00000605920.1_1_10:81586793-81587114:+|nuORF;ENST00000609350.1_1_2:128644229-128644535:+|nuORF	51.52775601994872	0.4429225830406686	4				NaN	NaN	0	NaN	10156	3662	13814
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13821	35.63	NaN	4838.2	30	0	379.07	0.035	+			14382	GTAIIQLPSK	10	71	514.3101757329242	1026.6057985326484	2	514.3112182617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GTAIIQLPSK_	ENSG00000112651|ENST00000388752|MRPL2;ENST00000485654.1_1_6:43022014-43023405:-|nuORF;MRPL2|p.M292*|1|0.49|ENSG00000112651|chr6:43054319-43054319|G/-|frameshift_variant;OBSL1-MRPL2|1|fusion	77.53327743719008	0.21577387331637743	4				NaN	NaN	0	NaN	10157	3662	13814
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13833	35.656	NaN	14532	30	0	4653.9	0.215				-1	 	0	82	505.8152704506104	1009.6159879680208	2	505.8158874511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10166	3665	13832
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13834	35.659	NaN	12884	30	0	987.58	0.106	+			11507	FPDKPITQY	9	86	554.7869747924786	1107.5593966517572	2	554.7877807617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FPDKPITQY_	ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656-2|DDOST;nc|ENSG00000244038|P39656-3|DDOST;nc|ENSG00000244038|P39656|DDOST	98.58198989935565	0.04066992115528678	4				NaN	NaN	0	NaN	10167	3665	13832
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13835	35.661	NaN	7700.4	30	0	791.49	0.106				-1	 	0	81	487.2814007901035	972.548248647007	2	487.780517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10168	3665	13832
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13836	35.663	NaN	4442	30	0	793.04	0.106			+	46160	VDTKYPDDY	9	72	558.2483298903677	1114.4821068475353	2	558.2491455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VDTKYPDDY_	REV__ENSG00000198734|ENST00000367797|F5;REV__F5|p.G1754Efs*13|1|0.41|ENSG00000198734|chr1:169529768-169529768|T/-|frameshift_variant;REV__F5|p.S1606Pfs*5|1|0.07|ENSG00000198734|chr1:169536662-169536663|-/CTGAAGTGGA|frameshift_variant	44.116797842482775	0.37197099687881774	4				NaN	NaN	0	NaN	10169	3665	13832
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13837	35.665	NaN	3649.1	30	0	575.24	0.106	+			30204	PSQPVVTEITK	11	70	599.8371064552724	1197.6596599773447	2	599.8377685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PSQPVVTEITK_	ENSG00000154134|ENST00000397801|ROBO3;nc|ENSG00000154134|Q96MS0-2|ROBO3;ROBO3|p.D1059Tfs*9|1|0.29|ENSG00000154134|chr11:124878121-124878121|G/-|frameshift_variant	30.85791745080538	0.6661168090068051	4				NaN	NaN	0	NaN	10170	3665	13832
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13838	35.667	NaN	2323.3	30	0	308.66	0.033	+			1367	AEVGRVLL	8	57	428.7652457895563	855.5159386459126	2	428.765869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEVGRVLL_	ANKRD17|p.L2249Yfs*84|1|0.34|ENSG00000132466|chr4:73090884-73090884|G/-|frameshift_variant;ENSG00000131503|ENST00000360839|ANKHD1;ENSG00000132466|ENST00000358602|ANKRD17;ENST00000514252.1_1_4:73978989-74017230:-|nuORF;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1;nc|ENSG00000132466|O75179-2|ANKRD17;nc|ENSG00000132466|O75179-6|ANKRD17;nc|ENSG00000132466|O75179-7|ANKRD17	82.30502934623384	0.30436709589983096	4				NaN	NaN	0	NaN	10171	3665	13832
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13839	35.667	NaN	4360.3	30	0	781.76	0.136				-1	 	0	53	357.21411003024565	712.4136671272913	2	357.2143859863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10172	3665	13832
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13848	35.689	NaN	90853	30	0	17799	0.186				-1	 	0	93	529.2812133449071	1056.547873756614	2	529.2820434570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10178	3668	13847
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13849	35.692	NaN	14535	30	0	1325.9	0.106				-1	 	0	75	514.7735231248865	1027.532493316573	2	514.7740478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10179	3668	13847
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13850	35.694	NaN	8450	30	0	1654.1	0.106	+			33133	RERAVREVL	9	79	564.3363310335735	1126.658109133947	2	564.3374633789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RERAVREVL_	ENSG00000164403|ENST00000378679|SHROOM1;nc|ENSG00000164403|Q2M3G4-2|SHROOM1	35.61828744233558	0.47037581924408073	4				NaN	NaN	0	NaN	10180	3668	13847
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13851	35.696	NaN	7758.3	30	0	586.11	0.106			+	24544	LGLLWTASI	9	84	487.2877659949407	972.5609790566814	2	487.2891540527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LGLLWTASI_	REV__ENSG00000075275|ENST00000674500|CELSR1;REV__nc|ENSG00000075275|Q9NYQ6|CELSR1	76.84663266511073	0.11118375776443899	4				NaN	NaN	0	NaN	10181	3668	13847
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13852	35.698	NaN	6039.4	30	0	1273.2	0.106	+			5078	ATSLVAVAP	9	61	414.74450868381405	827.4744644344281	2	414.7447814941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATSLVAVAP_	ENST00000545366.1_1_11:64055563-64055821:+|nuORF	73.97473282117947	0.12360187025703594	4				NaN	NaN	0	NaN	10182	3668	13847
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13853	35.699	NaN	3487.8	30	0	610.43	0.106				-1	 	0	56	427.71082481793854	853.4070967026771	2	427.7110900878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10183	3668	13847
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13854	35.701	NaN	5528.5	30	0	1598.5	0.036			+	13472	GLLFVQIAKS	10	60	359.221146207252	1074.641609221956	3	359.2216491699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GLLFVQIAKS_	REV__ENSG00000130702|ENST00000252999|LAMA5;REV__LAMA5|p.A3459Qfs*25|1|0.42|ENSG00000130702|chr20:62310736-62310736|C/-|frameshift_variant;REV__LAMA5|p.P3242Rfs*47|1|0.41|ENSG00000130702|chr20:62311700-62311700|C/-|frameshift_variant	31.954861631926434	0.6188749698950511	4				NaN	NaN	0	NaN	10184	3668	13847
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13864	35.723	NaN	19955	30	0	4480.6	0.214	+			7836	DQDPKPALV	9	83	491.76344288813624	981.5123328430725	2	491.76373291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DQDPKPALV_	ENSG00000129465|ENST00000216274|RIPK3;ENST00000557624.1_1_14:24808148-24809140:-|nuORF;nc|ENSG00000129465|Q9Y572-2|RIPK3;nc|ENSG00000129465|Q9Y572-3|RIPK3	37.15910966729921	0.4535818937225704	4				NaN	NaN	0	NaN	10191	3671	13863
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13865	35.727	NaN	34596	30	0	6579.2	0.106				-1	 	0	92	479.7812973634551	957.5480417937102	2	479.7816467285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10192	3671	13863
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13866	35.729	NaN	22778	30	0	3312.9	0.106	+			38565	SSFGNMIYK	9	84	523.7526198681376	1045.490686803075	2	523.7527465820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSFGNMIYK_	ENSG00000120137|ENST00000239231|PANK3	114.8945686534367	0.024290463251177924	4				NaN	NaN	0	NaN	10193	3671	13863
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13867	35.73	NaN	10917	30	0	774.27	0.106	+			36300	SERLTLLAP	9	76	500.29470201646654	998.5748510997331	2	500.294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SERLTLLAP_	ENSG00000120708|ENST00000442011|TGFBI;ENST00000515433.1_1_5:135385061-135390565:+|nuORF	68.78682469695295	0.14603441672067394	4				NaN	NaN	0	NaN	10194	3671	13863
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13868	35.732	NaN	4106.2	30	0	630.5	0.106	+			28151	NALNEQRVEF	10	81	610.3066821302081	1218.598811327216	2	610.3070068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NALNEQRVEF_	ENSG00000137497|ENST00000393695|NUMA1;nc|ENSG00000137497|Q14980-2|NUMA1;nc|ENSG00000137497|Q14980-3|NUMA1;nc|ENSG00000137497|Q14980-4|NUMA1;NUMA1|p.K1766Rfs*2|1|0.39|ENSG00000137497|chr11:72007357-72007357|G/-|frameshift_variant;NUMA1|p.L1786Pfs*18|1|0.23|ENSG00000137497|chr11:72007295-72007296|-/G|frameshift_variant	112.2953585152457	0.0411829880542106	4				NaN	NaN	0	NaN	10195	3671	13863
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13869	35.734	NaN	3100.1	30	0	650.09	0.035	+			43344	TGATLYLLR	9	38	336.53426418257783	NaN	0	336.5342712402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TGATLYLLR_	ENSG00000189043|ENST00000339600|NDUFA4;ENST00000486007.1_1_7:10977674-10979684:-|nuORF;NDUFA4|p.A37T|1|0.4|ENSG00000189043|chr7:10938830-10938830|C/T|missense_variant	24.20275056022122	0.35506675290109213	4				NaN	NaN	0	NaN	10196	3671	13863
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13870	35.735	NaN	3618.9	30	0	543.45	0.142	+			13719	GPVVVTSS	8	53	373.2099491294646	NaN	0	373.2099609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GPVVVTSS_	nc|ENSG00000100987|Q9NZR4-3|VSX1	29.841539824830324	1.7418937515398478	4				NaN	NaN	0	NaN	10197	3671	13863
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13886	35.769	NaN	24340	30	0	1973.2	0.214			+	25651	LQVPNSVLVT	10	95	535.3176724966526	NaN	0	535.3165893554688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LQVPNSVLVT_	REV__ENSG00000143341|ENST00000271588|HMCN1;REV__HMCN1|p.G3718Afs*6|1|0.04|ENSG00000143341|chr1:186113995-186113995|G/-|frameshift_variant;REV__HMCN1|p.L3491Hfs*10|1|0.12|ENSG00000143341|chr1:186095419-186095420|-/ATAT|frameshift_variant;REV__HMCN1|p.S4801Rfs*11|1|0.07|ENSG00000143341|chr1:186145536-186145537|-/AGAATAA|frameshift_variant;REV__HMCN1|p.Y2955Ifs*3|1|0.29|ENSG00000143341|chr1:186082933-186082934|-/A|frameshift_variant;REV__nc|ENSG00000143341|Q96RW7-2|HMCN1	63.42647028704847	0.20629711391763655	4				NaN	NaN	0	NaN	10210	3674	13885
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13887	35.772	NaN	5490.9	30	0	447.06	0.106	+			38645	SSIDPSLLSTK	11	88	574.3129501971628	1146.6113474611254	2	574.3141479492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSIDPSLLSTK_	ENSG00000134369|ENST00000685211|NAV1;NAV1|p.K1211Efs*5|1|0.68|ENSG00000134369|chr1:201803700-201803701|AA/-|frameshift_variant;nc|ENSG00000134369|Q8NEY1-2|NAV1;nc|ENSG00000134369|Q8NEY1-3|NAV1;nc|ENSG00000134369|Q8NEY1-4|NAV1;nc|ENSG00000134369|Q8NEY1-5|NAV1;nc|ENSG00000134369|Q8NEY1-6|NAV1;nc|ENSG00000134369|Q8NEY1-7|NAV1;nc|ENSG00000134369|Q8NEY1|NAV1	75.65223720490533	0.18861880313260296	4				NaN	NaN	0	NaN	10211	3674	13885
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13888	35.774	NaN	7035.8	30	0	1101.9	0.106	+			39493	STFLKDAPGE	10	86	532.7678279453025	1063.521102957405	2	532.76904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STFLKDAPGE_	CAPN10|p.S532Qfs*38|1|0.23|ENSG00000142330|chr2:240596785-240596786|-/G|frameshift_variant;ENSG00000142330|ENST00000391984|CAPN10;ENST00000416591.5_1_2:241535566-241537362:+|nuORF;ENST00000483602.1_1_2:241534571-241535939:+|nuORF;nc|ENSG00000142330|Q9HC96-2|CAPN10;nc|ENSG00000142330|Q9HC96-4|CAPN10	51.19269402634007	0.44601001148513897	4				NaN	NaN	0	NaN	10212	3674	13885
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13889	35.776	NaN	3495.1	30	0	286.19	0.106	+			34844	RYQDAIRVF	9	75	584.3161520809615	1166.617751228723	2	584.31689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RYQDAIRVF_	EIF3L|p.A337T|1|0.18|ENSG00000100129|chr22:37875943-37875943|G/A|missense_variant;ENSG00000100129|ENST00000652021|EIF3L;ENST00000457262.1_1_10:43062145-43062928:+|nuORF;nc|ENSG00000100129|Q9Y262-2|EIF3L	74.1650062923329	0.12277912660386392	4				NaN	NaN	0	NaN	10213	3674	13885
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13890	35.778	NaN	2964.8	30	0	345.63	0.106			+	25642	LQSPKNLK	8	59	464.2840314092957	926.5535098853915	2	464.2843322753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LQSPKNLK_	REV__ENSG00000175426|ENST00000311106|PCSK1;REV__ENST00000513085.1_1_5:95728707-95748688:-|nuORF;REV__nc|ENSG00000175426|P29120-2|PCSK1;REV__PCSK1|p.D715Y|1|0.07|ENSG00000175426|chr5:96393120-96393120|C/A|missense_variant;REV__PCSK1|p.Y729Ifs*21|2|0.31|ENSG00000175426|chr5:96393078-96393078|A/-|frameshift_variant	30.503639358989545	0.7238069182250283	4				NaN	NaN	0	NaN	10214	3674	13885
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13891	35.78	NaN	2205.9	30	0	241.1	0.033	+			2155	ALLKDSIK	8	58	444.28128332981544	886.5480137264309	2	444.2814636230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ALLKDSIK_	TMTC1|p.T569A|1|0.2|ENSG00000133687|chr12:29536289-29536289|T/C|missense_variant	30.503639358989545	0.7238069182250283	4				NaN	NaN	0	NaN	10215	3674	13885
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13892	35.78	NaN	6342.5	30	0	600.97	0.14			+	27962	MVLAAVLVDS	10	71	509.28546878384	1016.55638463448	2	509.2854309082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MVLAAVLVDS_	REV__ENSG00000157219|ENST00000287907|HTR5A	37.15910966729921	0.575322462179216	4				NaN	NaN	0	NaN	10216	3674	13885
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13901	35.802	NaN	160440	30	0	18027	0.164				-1	 	0	92	535.7606786211537	1069.5068043091073	2	535.7617797851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10222	3677	13900
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13902	35.805	NaN	33884	30	0	4585	0.106	+			27799	MSDTTFKAL	9	88	507.2516074150449	1012.4886618968898	2	507.2522277832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MSDTTFKAL_	CAPZA1|p.R259H|1|0.31|ENSG00000116489|chr1:112670047-112670047|G/A|missense_variant;CAPZA2|p.R259C|1|0.25|ENSG00000198898|chr7:116917781-116917781|C/T|missense_variant;ENSG00000116489|ENST00000263168|CAPZA1;ENSG00000198898|ENST00000361183|CAPZA2;ENST00000426421.5_1_7:116544367-116557918:+|nuORF;ENST00000466066.1_1_1:113202257-113212751:+|nuORF;ENST00000565906.2_1_15:89532752-89533049:-|nuORF	129.42129120953632	0.01549634589885217	4				NaN	NaN	0	NaN	10223	3677	13900
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13903	35.807	NaN	19720	30	0	5018.7	0.106			+	-1	FAGSRLGLI	9	83	488.2843882147683	974.5542234963366	2	488.28466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))FAGSRLGLI_	REV__ENST00000531905.1_1_11:65631192-65631594:+|nuORF	45.9519527083369	0.35044536499095585	4				NaN	NaN	0	NaN	10224	3677	13900
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13904	35.809	NaN	25864	30	0	3107.7	0.106	+			42306	TAFDVAEKY	9	83	522.2553483815904	1042.4961438299806	2	522.256103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TAFDVAEKY_	ENSG00000072110|ENST00000394419|ACTN1;ENST00000554508.5_1_14:69367621-69387744:-|nuORF;nc|ENSG00000072110|P12814-2|ACTN1;nc|ENSG00000072110|P12814-4|ACTN1;nc|ENSG00000072110|P12814|ACTN1	81.52500206392136	0.09095445986635249	4				NaN	NaN	0	NaN	10225	3677	13900
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13905	35.81	NaN	33455	30	0	8359.8	0.106				-1	 	0	70	466.2710414662056	930.5275299992112	2	466.2714538574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10226	3677	13900
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13906	35.812	NaN	18769	30	0	2018.7	0.106	+			42986	TEKIISAEL	9	88	502.2865547364611	1002.5585565397222	2	502.2871398925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TEKIISAEL_	ENSG00000073614|ENST00000399788|KDM5A;nc|ENSG00000073614|P29375-2|KDM5A	83.6470233535746	0.08277643980271215	4				NaN	NaN	0	NaN	10227	3677	13900
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13907	35.814	NaN	8134.9	30	0	849.35	0.037			+	-1	VFYRYDHM	8	78	573.7560817718705	1145.497610610541	2	573.7576293945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_VFYRYDHM(Oxidation (M))_	REV__ADAM18|p.N559Mfs*23|1|0.28|ENSG00000168619|chr8:39680077-39680077|A/-|frameshift_variant;REV__ENSG00000168619|ENST00000265707|ADAM18;REV__nc|ENSG00000168619|Q9Y3Q7-2|ADAM18	38.80614096846853	0.6637206697844082	4				NaN	NaN	0	NaN	10228	3677	13900
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13917	35.836	NaN	10241	30	0	1362	0.214	+			21652	KPVDPIVGY	9	79	494.2782272071881	986.5419014811762	2	494.2790832519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KPVDPIVGY_	COL12A1|p.F2273Lfs*20|1|0.26|ENSG00000111799|chr6:75124000-75124000|A/-|frameshift_variant;COL12A1|p.G2777Wfs*37|1|0.15|ENSG00000111799|chr6:75102684-75102685|-/G|frameshift_variant;COL12A1|p.G3027Wfs*19|1|0.1|ENSG00000111799|chr6:75087680-75087681|-/G|frameshift_variant;COL12A1|p.I210Nfs*4|1|0.18|ENSG00000111799|chr6:75189581-75189582|-/T|frameshift_variant;COL12A1|p.I57T|1|0.14|ENSG00000111799|chr6:75194851-75194851|A/G|missense_variant;COL12A1|p.L2085Hfs*4|1|0.22|ENSG00000111799|chr6:75128382-75128383|-/T|frameshift_variant;COL12A1|p.P2307Lfs*21|1|0.25|ENSG00000111799|chr6:75123356-75123356|G/-|frameshift_variant;COL12A1|p.R56I|1|0.31|ENSG00000111799|chr6:75194854-75194854|C/A|missense_variant;COL12A1|p.T1046Qfs*7|2|0.22|ENSG00000111799|chr6:75156372-75156372|G/-|frameshift_variant;ENSG00000111799|ENST00000322507|COL12A1;nc|ENSG00000111799|Q99715-4|COL12A1	54.776311868738084	0.25715957988447635	4				NaN	NaN	0	NaN	10235	3680	13916
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13918	35.839	NaN	8878	30	0	769.54	0.106	+			51382	YTLRDGVGGL	10	86	525.7823301196199	1049.5501073060398	2	526.2866821289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YTLRDGVGGL_	ENSG00000198585|ENST00000521288|NUDT16;ENST00000502852.1_1_3:131101978-131102182:+|nuORF;nc|ENSG00000198585|Q96DE0-3|NUDT16	58.78195531508484	0.37691818691852547	4				NaN	NaN	0	NaN	10236	3680	13916
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13919	35.841	NaN	4404.2	30	0	562.09	0.106	+			25477	LPSAATLRY	9	73	496.28009772482136	990.5456425164427	2	496.2820739746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LPSAATLRY_	ENSG00000167608|ENST00000619895|TMC4;nc|ENSG00000167608|Q7Z404-1|TMC4;nc|ENSG00000167608|Q7Z404|TMC4;TMC4|p.F240Lfs*221|1|0.42|ENSG00000167608|chr19:54168267-54168268|AA/-|frameshift_variant;TMC4|p.Q383Rfs*6|1|0.37|ENSG00000167608|chr19:54163872-54163872|G/-|frameshift_variant	67.49366992349736	0.1516260258713357	4				NaN	NaN	0	NaN	10237	3680	13916
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13920	35.843	NaN	6253.1	30	0	1081.6	0.106	+			42677	TAYWMPAEK	9	69	548.7598453471212	1095.5051377610423	2	548.7606201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TAYWMPAEK_	ENSG00000121316|ENST00000240617|PLBD1;PLBD1|p.N214Tfs*4|1|0.06|ENSG00000121316|chr12:14536628-14536628|T/-|frameshift_variant;PLBD1|p.Y42H|1|0.35|ENSG00000121316|chr12:14553404-14553404|A/G|missense_variant	72.87924865735499	0.12833875048249987	4				NaN	NaN	0	NaN	10238	3680	13916
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13921	35.845	NaN	6413.3	30	0	478.69	0.106			+	9546	ELEGHLVGPK	10	68	539.7978448085341	1077.5811366838682	2	539.7987670898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ELEGHLVGPK_	REV__nc|ENSG00000184385|Q8N2C9|UMODL1-AS1	64.20726635412375	0.3275756395432415	4				NaN	NaN	0	NaN	10239	3680	13916
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13922	35.847	NaN	3515.5	30	0	318.99	0.106			+	10113	ESLVRANL	8	61	451.25784911463506	900.5011452960701	2	451.25830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ESLVRANL_	REV__ENSG00000145675|ENST00000521381|PIK3R1;REV__nc|ENSG00000145675|P27986-4|PIK3R1;REV__PIK3R1|p.S460Kfs*5|1|0.33|ENSG00000145675|chr5:68293781-68293782|-/A|frameshift_variant	47.657333605630114	0.6087971902037268	4				NaN	NaN	0	NaN	10240	3680	13916
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13923	35.849	NaN	5134.7	30	0	859.52	0.037				-1	VFCNACGKTF	10	62	382.8404705677583	1145.4995823034749	3	383.1747741699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_VFC(Carbamidomethyl (C))NACGKTF_	BNC2|p.P606Rfs*7|2|0.28|ENSG00000173068|chr9:16436377-16436377|G/-|frameshift_variant;ENSG00000173068|ENST00000380672|BNC2;nc|ENSG00000173068|Q6ZN30-2|BNC2	36.446750945000026	0.5818864909973037	4				NaN	NaN	0	NaN	10241	3680	13916
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13928	35.863	NaN	286960	30	0	97646	0.138				-1	 	0	77	520.3102082861058	1038.6058636390114	2	520.310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10243	3683	13927
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13929	35.866	NaN	7070.7	30	0	2269.9	0.106			+	43078	TELVHVKP	8	65	461.76981150454566	921.5250700758913	2	461.77105712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TELVHVKP_	REV__ENST00000415202.1_1_1:211849190-211858945:+|nuORF	40.5726180659479	0.6527593143185008	4				NaN	NaN	0	NaN	10244	3683	13927
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13930	35.868	NaN	9620	30	0	902.12	0.106	+			236	AAMKALQAL	9	67	458.76731616133515	915.5200793894703	2	458.76763916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AAMKALQAL_	ENSG00000040341|ENST00000524300|STAU2;ENST00000521451.5_1_8:74528012-74659064:-|nuORF;nc|ENSG00000040341|Q9NUL3-2|STAU2;nc|ENSG00000040341|Q9NUL3-3|STAU2;nc|ENSG00000040341|Q9NUL3-7|STAU2;nc|ENSG00000040341|Q9NUL3-8|STAU2;STAU2|p.C491Lfs*31|1|0.39|ENSG00000040341|chr8:73552072-73552073|-/G|frameshift_variant;STAU2|p.K274Nfs*22|1|0.09|ENSG00000040341|chr8:73613813-73613813|T/-|frameshift_variant;STAU2|p.K410Ifs*9|1|0.07|ENSG00000040341|chr8:73552313-73552314|-/A|frameshift_variant;STAU2|p.L259Tfs*15|2|0.48|ENSG00000040341|chr8:73613860-73613861|-/T|frameshift_variant	111.64827973302667	0.027316110422332632	4				NaN	NaN	0	NaN	10245	3683	13927
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13931	35.87	NaN	6108.3	30	0	958.1	0.106				-1	 	0	58	429.754947978231	857.495343023262	2	429.75537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10246	3683	13927
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13932	35.871	NaN	6880.2	30	0	414.02	0.106				-1	FHMVQNVSM	9	75	554.7487135884928	1107.4828742437855	2	554.7479248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_FHMVQNVSM(Oxidation (M))_	ENSG00000004399|ENST00000324093|PLXND1;nc|ENSG00000004399|Q9Y4D7-2|PLXND1;PLXND1|p.P1734Hfs*40|1|0.26|ENSG00000004399|chr3:129559716-129559716|G/-|frameshift_variant;PLXND1|p.S1268Qfs*34|1|0.3|ENSG00000004399|chr3:129569907-129569908|-/C|frameshift_variant;PLXND1|p.T1897Rfs*17|1|0.06|ENSG00000004399|chr3:129556402-129556402|G/-|frameshift_variant	42.396135135203025	0.392153681582562	4				NaN	NaN	0	NaN	10247	3683	13927
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13933	35.873	NaN	2978.9	30	0	545.39	0.106	+			8084	DVTPHKSEL	9	66	513.266456147681	1024.5183593621618	2	513.2659301757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DVTPHKSEL_	ENST00000303575.8_1_14:75601016-75601088:-|nuORF	47.657333605630114	0.33044192980041115	4				NaN	NaN	0	NaN	10248	3683	13927
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13934	35.875	NaN	6256.7	30	0	635.48	0.036			+	43508	TGSGRFLQSI	10	71	533.2903774114178	NaN	0	533.290771484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TGSGRFLQSI_	REV__ENSG00000105538|ENST00000222145|RASIP1	41.080066990542036	0.36199559365313844	4				NaN	NaN	0	NaN	10249	3683	13927
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13948	35.903	NaN	8294.7	30	0	803.68	0.214	+			34947	SAAKLLTEY	9	70	498.2735756540494	994.5325983748988	2	498.2735595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAAKLLTEY_	ENSG00000189221|ENST00000338702|MAOA;MAOA|p.G405Afs*12|1|0.26|ENSG00000189221|chrX:43741995-43741995|G/-|frameshift_variant	93.5975768576971	0.05472259948179787	4				NaN	NaN	0	NaN	10260	3686	13947
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13949	35.907	NaN	3065	30	0	630.59	0.106				-1	 	0	45	352.70764540823495	703.4007378832699	2	352.70794677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10261	3686	13947
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13950	35.909	NaN	3274.6	30	0	494.07	0.106			+	2472	APLLHGPA	8	47	388.2266227591071	774.4386925850142	2	388.226806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_APLLHGPA_	REV__CNNM2|p.W228Vfs*183|1|0.44|ENSG00000148842|chr10:102919155-102919156|-/C|frameshift_variant	33.49298260027079	0.7007254697536482	4				NaN	NaN	0	NaN	10262	3686	13947
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13951	35.911	NaN	4465.3	30	0	712.16	0.106	+			43722	TKSVYTRSVI	10	67	577.3314881300902	1152.6484233269803	2	577.3328857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TKSVYTRSVI_	ENSG00000149269|ENST00000356341|PAK1;nc|ENSG00000149269|Q13153-2|PAK1	38.753607047826485	0.5606299674732264	4				NaN	NaN	0	NaN	10263	3686	13947
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13952	35.913	NaN	3230.9	30	0	155.96	0.106	+			34203	RTDNISFMLK	10	74	612.8231466996202	1223.6317404660404	2	613.3252563476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RTDNISFMLK_	ENSG00000162434|ENST00000342505|JAK1;JAK1|p.K860Nfs*16|3|0.29|ENSG00000162434|chr1:64841314-64841314|T/-|frameshift_variant	74.1650062923329	0.2432923583094885	4				NaN	NaN	0	NaN	10264	3686	13947
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13953	35.914	NaN	2597.3	30	0	299.58	0.036	+			28715	NNKILPMHF	9	66	557.2955932617188	NaN	0	557.2955932617188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NNKILPMHF_	ENSG00000141441|ENST00000269209|GAREM1;nc|ENSG00000141441|Q9H706-2|GAREM1;nc|ENSG00000141441|Q9H706-3|GAREM1	31.954861631926434	0.3162336699109506	4				NaN	NaN	0	NaN	10265	3686	13947
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13954	35.915	NaN	4674.7	30	0	609.77	0.14			+	37683	SLSAVPYLV	9	74	474.7741609745492	947.5337690158984	2	475.2750244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SLSAVPYLV_	REV__ENSG00000063601|ENST00000445323|MTMR1;REV__ENST00000488357.1_3_X:149924253-149933206:+|nuORF;REV__nc|ENSG00000063601|Q13613|MTMR1	38.80614096846853	0.43426287593479557	4				NaN	NaN	0	NaN	10266	3686	13947
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13963	35.938	NaN	17088	30	0	1330.5	0.214	+			10454	EVNKFQMAY	9	80	565.2701883463196	1128.5258237594392	2	565.2713623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EVNKFQMAY_	ENSG00000140319|ENST00000267884|SRP14	197.59988572304982	4.347120859510897E-05	4				NaN	NaN	0	NaN	10272	3689	13962
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13964	35.941	NaN	17213	30	0	3597.5	0.106	+			11234	FIIDSSRSV	9	78	512.2763736903643	1022.5381944475286	2	512.2767333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FIIDSSRSV_	ENSG00000132031|ENST00000407540|MATN3;ENSG00000132561|ENST00000254898|MATN2;MATN3|p.T387Hfs*10|2|0.28|ENSG00000132031|chr2:20000450-20000450|T/-|frameshift_variant;nc|ENSG00000132031|O15232-2|MATN3;nc|ENSG00000132561|O00339-2|MATN2;nc|ENSG00000132561|O00339-3|MATN2	93.5975768576971	0.05472259948179787	4				NaN	NaN	0	NaN	10273	3689	13962
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13965	35.943	NaN	7708.8	30	0	932.15	0.106	+			11041	FEMATRAAL	9	77	505.25952951580257	1008.5045060984052	2	505.26043701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FEMATRAAL_	ENSG00000067560|ENST00000418115|RHOA	70.8162118820467	0.13725933411854815	4				NaN	NaN	0	NaN	10274	3689	13962
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13966	35.945	NaN	6187.5	30	0	288.98	0.106	+			45643	TYRTPSVLN	9	83	525.7823301196199	1049.5501073060398	2	525.7789306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TYRTPSVLN_	DLGAP2|p.T341Hfs*6|1|0.11|ENSG00000198010|chr8:1565708-1565709|-/C|frameshift_variant;ENSG00000198010|ENST00000637795|DLGAP2;nc|ENSG00000198010|Q9P1A6-2|DLGAP2;nc|ENSG00000198010|Q9P1A6-3|DLGAP2;nc|ENSG00000198010|Q9P1A6|DLGAP2	84.9155231211612	0.07920012719736333	4				NaN	NaN	0	NaN	10275	3689	13962
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13967	35.947	NaN	14896	30	0	3628.8	0.106	+			47984	VSPIRVNAL	9	83	484.79763684615097	967.580720759102	2	484.7978210449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSPIRVNAL_	ADAMTS9|p.C1222Lfs*15|1|0.3|ENSG00000163638|chr3:64604004-64604004|C/-|frameshift_variant;ADAMTS9|p.L487*|1|0.4|ENSG00000163638|chr3:64651020-64651020|A/-|frameshift_variant;ADAMTS9|p.S1884Ffs*2|1|0.35|ENSG00000163638|chr3:64533233-64533233|G/-|frameshift_variant;ENSG00000163638|ENST00000498707|ADAMTS9;ENST00000475557.5_1_3:64600969-64673333:-|nuORF;nc|ENSG00000163638|Q9P2N4-1|ADAMTS9;nc|ENSG00000163638|Q9P2N4-2|ADAMTS9;nc|ENSG00000163638|Q9P2N4-4|ADAMTS9	41.42661286455405	0.403525789677298	4				NaN	NaN	0	NaN	10276	3689	13962
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13968	35.949	NaN	10363	30	0	840.88	0.035	+			10716	FACLFLSTL	9	75	507.77229357904366	1013.5300342248873	2	507.77239990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FACLFLSTL_	ENSG00000198400|ENST00000524377|NTRK1;ENST00000530298.5_1_1:156807654-156845592:+|nuORF;nc|ENSG00000198400|P04629-2|NTRK1;nc|ENSG00000198400|P04629-3|NTRK1;nc|ENSG00000198400|P04629-4|NTRK1	55.50420428727701	0.2510918378945873	4				NaN	NaN	0	NaN	10277	3689	13962
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13969	35.949	NaN	4471.8	30	0	1154.8	0.138				-1	 	0	52	412.8015131973871	823.5884734615743	2	412.8017272949219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10278	3689	13962
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13976	35.967	NaN	30631	30	0	12275	0.214	+			49904	VYTTMAEHF	9	81	549.7492847931762	1097.4840166531524	2	549.7503662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYTTMAEHF_	ENSG00000117472|ENST00000372003|TSPAN1;TSPAN1|p.T119M|1|0.33|ENSG00000117472|chr1:46184801-46184801|C/T|missense_variant	133.8126618989323	0.013382794002272486	4				NaN	NaN	0	NaN	10282	3692	13975
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13977	35.971	NaN	23180	30	0	3662.2	0.106	+			11872	FTGLIGPMK	9	74	482.2696891142186	962.5248252952372	2	482.2699890136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FTGLIGPMK_	CON__ENSEMBL:ENSBTAP00000031900;ENSG00000047457|ENST00000264613|CP;ENST00000467010.2_1_8:92169620-92169905:+|nuORF;ENST00000489736.5_1_3:148904295-148925363:-|nuORF;ENST00000490639.5_1_3:148895590-148939579:-|nuORF;ENST00000497797.5_1_3:148905800-148917562:-|nuORF	52.936696900407355	0.27249468807391813	4				NaN	NaN	0	NaN	10283	3692	13975
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13978	35.972	NaN	16375	30	0	9135.9	0.106				-1	 	0	61	337.57005742690234	1009.688342880907	3	337.57049560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10284	3692	13975
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13979	35.974	NaN	15918	30	0	3693.7	0.106	+			14426	GTAQLTLLH	9	81	477.2739493014799	952.5333456697598	2	477.2740478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTAQLTLLH_	ENSG00000254470|ENST00000532090|AP5B1;ENST00000316846.2_11:65545618-65547282:-|nuORF	185.54966270084765	0.0007389233275946833	4				NaN	NaN	0	NaN	10285	3692	13975
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13980	35.976	NaN	20268	30	0	12945	0.106			+	-1	CRRRFVFVFYW	11	76	559.9549383359027	1676.842985607908	3	559.9557495117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))C(Carbamidomethyl (C))RRRFVFVFYW_	REV__ENST00000507721.5_1_4:83346026-83346083:-|nuORF	0.37141330420238305	0.902963125519592	4				NaN	NaN	0	NaN	10286	3692	13975
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13981	35.978	NaN	9532.8	30	0	875.83	0.106				-1	 	0	72	421.75214713075627	841.4897413283126	2	421.75250244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10287	3692	13975
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13982	35.98	NaN	2995.1	30	0	287.93	0.034			+	24376	LFSGFLPK	8	63	454.7636392990308	907.5127256648616	2	454.76348876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LFSGFLPK_	REV__ENSG00000183024|ENST00000328890|OR1G1	42.47446043378293	0.6409579893742323	4				NaN	NaN	0	NaN	10288	3692	13975
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13992	36.001	NaN	17874	30	0	2012.3	0.214				-1	 	0	67	422.26808536521855	842.5216177972371	2	422.2687072753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10295	3695	13991
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13993	36.005	NaN	12368	30	0	1153	0.106	+			1088	AELCTIWKN	9	79	539.2723486084046	NaN	0	539.2562255859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AELCTIWKN_	ENST00000264255.7_1_2:99949665-99952760:-|nuORF	47.657333605630114	0.2228375344433429	4				NaN	NaN	0	NaN	10296	3695	13991
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13994	36.007	NaN	10094	30	0	1829.5	0.106	+			49735	VYNPTPNSL	9	77	502.7556844794511	1003.4968160257022	2	502.7562561035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYNPTPNSL_	COL12A1|p.F2273Lfs*20|1|0.26|ENSG00000111799|chr6:75124000-75124000|A/-|frameshift_variant;COL12A1|p.G2777Wfs*37|1|0.15|ENSG00000111799|chr6:75102684-75102685|-/G|frameshift_variant;COL12A1|p.G3027Wfs*19|1|0.1|ENSG00000111799|chr6:75087680-75087681|-/G|frameshift_variant;COL12A1|p.L2085Hfs*4|1|0.22|ENSG00000111799|chr6:75128382-75128383|-/T|frameshift_variant;COL12A1|p.P2307Lfs*21|1|0.25|ENSG00000111799|chr6:75123356-75123356|G/-|frameshift_variant;ENSG00000111799|ENST00000322507|COL12A1;nc|ENSG00000111799|Q99715-2|COL12A1;nc|ENSG00000111799|Q99715-4|COL12A1	104.0567914643314	0.03506238181059741	4				NaN	NaN	0	NaN	10297	3695	13991
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13995	36.009	NaN	7489.8	30	0	601.19	0.034			+	43972	TPEVYKVL	8	78	474.7741609745492	947.5337690158984	2	474.7742004394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TPEVYKVL_	REV__ENST00000468415.6_1_3:58739536-58855213:-|nuORF	51.33545320467046	0.5859736979383976	4				NaN	NaN	0	NaN	10298	3695	13991
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13996	36.009	NaN	79682	30	0	23612	0.106			+	47224	VMHLSELVN	9	66	521.2735356854064	NaN	0	521.2726440429688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VMHLSELVN_	REV__E2F8|p.T831Ifs*21|1|0.05|ENSG00000129173|chr11:19224770-19224771|-/TTTAA|frameshift_variant;REV__ENSG00000129173|ENST00000250024|E2F8	51.33545320467046	0.19748963086191895	4				NaN	NaN	0	NaN	10299	3695	13991
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13997	36.011	NaN	2497.7	30	0	540.68	0.106	+			3283	ASLPSELIVHI	11	48	393.5641370004006	1177.6705816014019	3	393.5644836425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASLPSELIVHI_	ENSG00000165355|ENST00000298097|FBXO33	31.634271133179894	0.6579734920221648	4				NaN	NaN	0	NaN	10300	3695	13991
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13998	36.013	NaN	2788.6	30	0	448.91	0.038			+	-1	MMAKKAREET	10	73	613.7954978720934	1225.5764428109867	2	613.794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Oxidation (M)	_M(Oxidation (M))M(Oxidation (M))AKKAREET_	REV__nc|ENSG00000002079|Q9H6N6|MYH16	35.15202426646627	0.5927656479315102	4				NaN	NaN	0	NaN	10301	3695	13991
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14008	36.035	NaN	21023	30	0	2069.6	0.214				-1	 	0	94	484.281468705919	966.548384478638	2	484.2818603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10308	3698	14007
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14009	36.039	NaN	19399	30	0	5543	0.106				-1	 	0	66	447.25771282733484	892.5008727214697	2	447.2579040527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10309	3698	14007
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14010	36.04	NaN	18422	30	0	1563.2	0.106	+			15855	GYFGNPQKF	9	87	529.2588342621485	1056.503115591097	2	529.2592163085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GYFGNPQKF_	ENSG00000053747|ENST00000313654|LAMA3;LAMA3|p.E2016Rfs*13|1|0.27|ENSG00000053747|chr18:23901164-23901164|G/-|frameshift_variant;LAMA3|p.T2580Hfs*68|1|0.55|ENSG00000053747|chr18:23915376-23915376|A/-|frameshift_variant;nc|ENSG00000053747|Q16787-1|LAMA3;nc|ENSG00000053747|Q16787-3|LAMA3;nc|ENSG00000053747|Q16787-4|LAMA3	128.8611167810002	0.015835461597062447	4				NaN	NaN	0	NaN	10310	3698	14007
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14011	36.042	NaN	7742.6	30	0	737.23	0.106			+	51007	YIYAIVFY	8	78	526.2793355457696	1050.5441181583392	2	526.2798461914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YIYAIVFY_	REV__GPR180|p.C186Y|1|0.2|ENSG00000152749|chr13:94619201-94619201|G/A|missense_variant	67.3271909547111	0.42924334279516513	4				NaN	NaN	0	NaN	10311	3698	14007
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14012	36.044	NaN	4145.9	30	0	473.32	0.106			+	7430	DEVSRLTVI	9	71	516.2893745198683	1030.5641961065364	2	516.2906494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DEVSRLTVI_	REV__ENSG00000137571|ENST00000260126|SLCO5A1;REV__nc|ENSG00000137571|Q9H2Y9-2|SLCO5A1	51.19269402634007	0.2889735674168909	4				NaN	NaN	0	NaN	10312	3698	14007
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14013	36.046	NaN	7554.3	30	0	1211.4	0.036			+	28415	NETNSSSPLK	10	75	538.7652629155742	NaN	0	538.7655639648438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NETNSSSPLK_	REV__ENST00000395468.8_1_14:55532579-55532627:+|nuORF	56.43379154798735	0.2634004003759929	4				NaN	NaN	0	NaN	10313	3698	14007
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14014	36.046	NaN	12887	30	0	1104.7	0.142	+			27268	MEWLRMLW	8	75	590.7861774378295	1179.5578019424588	2	590.7872924804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_MEWLRM(Oxidation (M))LW_	ENSG00000119969|ENST00000348459|HELLS;HELLS|p.E229K|1|0.43|ENSG00000119969|chr10:94574167-94574167|G/A|missense_variant;nc|ENSG00000119969|Q9NRZ9-2|HELLS;nc|ENSG00000119969|Q9NRZ9-3|HELLS;nc|ENSG00000119969|Q9NRZ9-4|HELLS;nc|ENSG00000119969|Q9NRZ9-5|HELLS;nc|ENSG00000119969|Q9NRZ9-6|HELLS;nc|ENSG00000119969|Q9NRZ9-7|HELLS;nc|ENSG00000119969|Q9NRZ9-8|HELLS	51.33545320467046	0.5859736979383976	4				NaN	NaN	0	NaN	10314	3698	14007
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14019	36.062	NaN	12979	30	0	4106.2	0.214	+			32635	QYTQALEKF	9	74	564.2896122370546	1126.564671540909	2	564.29052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QYTQALEKF_	ASAP2|p.H548Qfs*57|1|0.14|ENSG00000151693|chr2:9374842-9374842|C/-|frameshift_variant;ASAP2|p.L787Afs*16|1|0.31|ENSG00000151693|chr2:9388513-9388514|-/C|frameshift_variant;ENSG00000151693|ENST00000281419|ASAP2;nc|ENSG00000151693|O43150-2|ASAP2	93.1432384553994	0.056003526918089595	4				NaN	NaN	0	NaN	10316	3701	14018
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14020	36.066	NaN	6318.1	30	0	796.23	0.106			+	37101	SISRSLFL	8	68	461.76981150454566	921.5250700758913	2	462.2697448730469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SISRSLFL_	REV__ENSG00000149201|ENST00000445632|CCDC81	44.116797842482775	0.6307669463330267	4				NaN	NaN	0	NaN	10317	3701	14018
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14021	36.068	NaN	6366.6	30	0	923.35	0.106	+			27065	MAETEERSL	9	69	554.2519819744593	NaN	0	554.2518920898438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))MAETEERSL_	ENSG00000091527|ENST00000264993|CDV3;nc|ENSG00000091527|Q9UKY7-2|CDV3	49.44154591367651	0.21054156626303966	4				NaN	NaN	0	NaN	10318	3701	14018
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14022	36.069	NaN	5740.4	30	0	514.09	0.106	+			35173	SAIFRSDSL	9	68	498.26147378030066	NaN	0	498.2612609863281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SAIFRSDSL_	ENSG00000180921|ENST00000388913|FAM83H	43.650786325866115	0.2504488100985368	4				NaN	NaN	0	NaN	10319	3701	14018
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14023	36.071	NaN	6222	30	0	952.93	0.106				-1	LWKAILMPG	9	69	522.7995190303526	1043.584485127505	2	522.8007202148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_LWKAILM(Oxidation (M))PG_	ENST00000290510.9_1_12:6948642-6948927:+|nuORF	33.51558372728122	0.4900267029546261	4				NaN	NaN	0	NaN	10320	3701	14018
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14024	36.073	NaN	4392.1	30	0	788.39	0.106				-1	VSMLNVYLK	9	70	541.7982273334836	1081.5819017337672	2	541.7994384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_VSM(Oxidation (M))LNVYLK_	ENSG00000111775|ENST00000229379|COX6A1;ENST00000550009.1_1_12:120875908-120876378:+|nuORF	52.936696900407355	0.27249468807391813	4				NaN	NaN	0	NaN	10321	3701	14018
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14025	36.075	NaN	4394.4	30	0	363.17	0.032				-1	 	0	56	407.7545946093546	813.4946362855093	2	407.7549133300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10322	3701	14018
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14034	36.095	NaN	7488.5	30	0	752.33	0.214	+			35895	SEFATTNQI	9	82	505.74261124696227	1009.4706695607246	2	505.7433166503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEFATTNQI_	ENSG00000149600|ENST00000278980|COMMD7;ENST00000610160.1_1_20:31291624-31315937:-|nuORF;nc|ENSG00000149600|Q86VX2-2|COMMD7	112.41091882917199	0.026537921851008135	4				NaN	NaN	0	NaN	10328	3704	14033
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14035	36.098	NaN	10134	30	0	1783.5	0.106	+			25329	LPDKTIASL	9	73	479.2844156845271	NaN	0	479.2846374511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LPDKTIASL_	ENSG00000117625|ENST00000419091|RCOR3;nc|ENSG00000117625|Q9P2K3-2|RCOR3;nc|ENSG00000117625|Q9P2K3-4|RCOR3;nc|ENSG00000117625|Q9P2K3|RCOR3;RCOR3|p.T133Lfs*7|1|0.26|ENSG00000117625|chr1:211278165-211278165|A/-|frameshift_variant	53.08895987439943	0.18540527177656715	4				NaN	NaN	0	NaN	10329	3704	14033
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14036	36.1	NaN	2824.5	30	0	981.15	0.106			+	-1	YVTCLQAGPCT	11	60	635.2825666691621	1268.550580405124	2	635.283935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_YVTC(Carbamidomethyl (C))LQAGPC(Carbamidomethyl (C))T_	REV__ENSG00000169710|ENST00000306749|FASN	38.753607047826485	0.5749975102143227	4				NaN	NaN	0	NaN	10330	3704	14033
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14037	36.102	NaN	3640.8	30	0	724.69	0.106	+			43735	TLAIEAAG	8	53	373.2099491294646	NaN	0	373.21002197265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TLAIEAAG_	ENSG00000197993|ENST00000355265|KEL;ENST00000479768.6_1_7:142643674-142659293:-|nuORF;ENST00000494148.1_1_7:142651443-142655450:-|nuORF	33.51558372728122	1.7418937515398478	4				NaN	NaN	0	NaN	10331	3704	14033
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14038	36.104	NaN	1316.5	30	0	329.72	0.106				-1	 	0	38	357.21411003024565	712.4136671272913	2	357.2142333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10332	3704	14033
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14039	36.105	NaN	1268.8	30	0	200.6	0.036	+			50517	YAPLKEIPP	9	41	343.19849746683855	NaN	0	343.19854736328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YAPLKEIPP_	ENSG00000186416|ENST00000688521|NKRF;nc|ENSG00000186416|O15226-2|NKRF;nc|ENSG00000186416|O15226|NKRF;NKRF|p.R664Dfs*7|1|0.22|ENSG00000186416|chrX:119589435-119589435|T/-|frameshift_variant	29.14955571784316	0.3303970763161698	4				NaN	NaN	0	NaN	10333	3704	14033
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14040	36.106	NaN	2498.3	30	0	209.84	0.141				-1	IIDHFLCDP	9	64	565.2701883463196	1128.5258237594392	2	566.77734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_IIDHFLC(Carbamidomethyl (C))DP_	ENSG00000196832|ENST00000641879|OR11G2;nc|ENSG00000196832|Q8NGC1|OR11G2	23.04248740728303	0.5879033540491928	4				NaN	NaN	0	NaN	10334	3704	14033
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14047	36.124	NaN	18464	30	0	1515.3	0.214	+			51327	YSLVSREL	8	80	483.7661798607782	965.5178067883564	2	483.76605224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YSLVSREL_	ENSG00000119777|ENST00000238788|TMEM214	136.26810882979174	0.24432575764330772	4				NaN	NaN	0	NaN	10338	3707	14046
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14048	36.128	NaN	10553	30	0	2372.5	0.106			+	19024	IWSHPIDSY	9	78	559.2686623983881	1116.522771863576	2	559.7695922851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IWSHPIDSY_	REV__ACTR3B-JMJD1C|1|fusion;REV__ENSG00000171988|ENST00000399262|JMJD1C;REV__nc|ENSG00000171988|Q15652-3|JMJD1C	47.91560031466742	0.327412564698279	4				NaN	NaN	0	NaN	10339	3707	14046
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14049	36.13	NaN	8734.8	30	0	452.05	0.106	+			11386	FLLTPTAPY	9	78	511.78354433304435	1021.5525357328887	2	511.78436279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FLLTPTAPY_	ENST00000453571.5_1_11:47290775-47295429:+|nuORF	50.0245360154114	0.3026755932229825	4				NaN	NaN	0	NaN	10340	3707	14046
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14050	36.132	NaN	3570.9	30	0	726.14	0.106	+			15570	GVGGYLPL	8	54	388.2212364825641	774.4279200319282	2	388.2210388183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GVGGYLPL_	HERVH-int_dup3527|chrX:4542813-4545870:-|8.094520876636611|0.0139942278604804|9.18|476.0|154|3|anti-sense	33.49298260027079	0.7007254697536482	4				NaN	NaN	0	NaN	10341	3707	14046
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14051	36.133	NaN	2897.3	30	0	176.18	0.106	+			27197	MEDIKFPRT	9	75	568.7917542828659	1135.5689556325317	2	568.79296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MEDIKFPRT_	ENSG00000117020|ENST00000673466|AKT3;nc|ENSG00000117020|Q9Y243-2|AKT3	44.377184641726394	0.36891676396732553	4				NaN	NaN	0	NaN	10342	3707	14046
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14052	36.135	NaN	4078.2	30	0	396.15	0.106			+	2161	ALLLPQPKP	9	67	488.8126918146411	975.6108306960822	2	488.813232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ALLLPQPKP_	REV__ENST00000418045.5_3_2:201390872-201390965:+|nuORF	53.351449002276354	0.2690372970092375	4				NaN	NaN	0	NaN	10343	3707	14046
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14053	36.137	NaN	2350.5	30	0	260.69	0.034			+	44256	TSAGASCSPR	10	65	468.71359763805856	935.4126423429171	2	468.7140808105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TSAGASCSPR_	REV__ENSG00000163564|ENST00000368140|PYHIN1;REV__nc|ENSG00000163564|Q6K0P9-2|PYHIN1;REV__nc|ENSG00000163564|Q6K0P9-3|PYHIN1;REV__nc|ENSG00000163564|Q6K0P9-4|PYHIN1;REV__nc|ENSG00000163564|Q6K0P9-5|PYHIN1;REV__nc|ENSG00000163564|Q6K0P9-6|PYHIN1	37.81151784470057	0.569310847604193	4				NaN	NaN	0	NaN	10344	3707	14046
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14060	36.155	NaN	9504.1	30	0	2253.1	0.214			+	-1	VFAQGRMKMT	10	77	592.800119547479	1183.5856861617578	2	592.8009643554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_VFAQGRMKM(Oxidation (M))T_	REV__ENSG00000125870|ENST00000246071|SNRPB2;REV__ENST00000478522.1_1_20:16710709-16713038:+|nuORF	44.377184641726394	0.5088115166961078	4				NaN	NaN	0	NaN	10348	3710	14059
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14061	36.158	NaN	21871	30	0	4196.4	0.106	+			37342	SLEQRRGEA	9	82	523.2734950482161	1044.532437163232	2	523.2745971679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLEQRRGEA_	ENST00000261038.5_1_3:122514002-122525788:+|nuORF;ENST00000477647.1_1_3:122514002-122598222:+|nuORF	72.87924865735499	0.12833875048249987	4				NaN	NaN	0	NaN	10349	3710	14059
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14062	36.16	NaN	9555.1	30	0	506.57	0.106			+	-1	LCGQVMCPY	9	80	535.7276736712596	1069.440794409319	2	535.7286987304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LCGQVMC(Carbamidomethyl (C))PY_	REV__ENSG00000117000|ENST00000372771|RLF;REV__RLF|p.N1741Ifs*21|1|0.18|ENSG00000117000|chr1:40239919-40239919|A/-|frameshift_variant;REV__RLF|p.V1739Kfs*12|1|0.09|ENSG00000117000|chr1:40239916-40239917|TG/-|frameshift_variant	40.5726180659479	0.4135428067754104	4				NaN	NaN	0	NaN	10350	3710	14059
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14063	36.162	NaN	6680.9	30	0	949.09	0.106			+	29600	PFRTPSIN	8	67	466.25420479829745	NaN	0	466.2713623046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PFRTPSIN_	REV__ENST00000561370.5_1_14:68048786-68054020:+|nuORF	66.42927471994793	1.7418937515398478	4				NaN	NaN	0	NaN	10351	3710	14059
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14064	36.164	NaN	6294	30	0	606.13	0.106			+	37774	SLVTFGVVGL	10	71	496.29447992902897	990.574406924858	2	496.29461669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SLVTFGVVGL_	REV__ENSG00000172457|ENST00000641668|OR9G4;REV__nc|ENSG00000172457|Q8NGQ1|OR9G4	51.33545320467046	0.4446945571623749	4				NaN	NaN	0	NaN	10352	3710	14059
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14065	36.166	NaN	3873.7	30	0	260.28	0.106	+			12675	GEIVIKNL	8	58	443.27344725177386	884.5323415703477	2	443.27374267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GEIVIKNL_	ENSG00000070882|ENST00000313367|OSBPL3;ENST00000409863.5_1_7:24839804-24873723:-|nuORF;nc|ENSG00000070882|Q9H4L5-2|OSBPL3;nc|ENSG00000070882|Q9H4L5-3|OSBPL3;nc|ENSG00000070882|Q9H4L5-4|OSBPL3	84.9155231211612	0.2928622555056503	4				NaN	NaN	0	NaN	10353	3710	14059
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14066	36.168	NaN	5387.6	30	0	706.29	0.038	+			29569	PFFFFAAICL	10	64	392.53618062343554	1174.5867124705067	3	392.5364685058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PFFFFAAICL_	ENSG00000160326|ENST00000371899|SLC2A6;ENST00000485978.1_1_9:136337145-136339092:-|nuORF;nc|ENSG00000160326|Q9UGQ3-2|SLC2A6	31.529811441608018	0.6223461015008678	4				NaN	NaN	0	NaN	10354	3710	14059
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14072	36.184	NaN	11508	30	0	2033.4	0.214				-1	 	0	74	506.7578024659232	1011.5010519986464	2	506.7583312988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10357	3713	14071
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14073	36.187	NaN	19987	30	0	2301.5	0.106				-1	 	0	81	485.7525188918462	969.4904848504924	2	485.7528381347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10358	3713	14071
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14074	36.189	NaN	9039.3	30	0	1826	0.106	+			16300	HEHIEILTV	9	69	545.7986975449919	NaN	0	545.798583984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HEHIEILTV_	ENSG00000232119|ENST00000371317|MCTS1;ENST00000487133.1_1_X:119739298-119742228:+|nuORF;MCTS1|p.F71Lfs*12|1|0.37|ENSG00000232119|chrX:120606122-120606122|T/-|frameshift_variant;nc|ENSG00000232119|Q9ULC4-2|MCTS1;nc|ENSG00000232119|Q9ULC4-3|MCTS1	74.25504064058377	0.09106938647426577	4				NaN	NaN	0	NaN	10359	3713	14071
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14075	36.191	NaN	11345	30	0	1996.3	0.106	+			6546	AYGTVHYF	8	86	479.22626004880266	956.4379671644053	2	479.2265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AYGTVHYF_	ENSG00000100258|ENST00000474879|LMF2;ENST00000514938.1_1_22:50943733-50944613:-|nuORF;nc|ENSG00000100258|Q9BU23-2|LMF2;nc|ENSG00000100258|Q9BU23-3|LMF2	46.76643321282427	0.6143254112625767	4				NaN	NaN	0	NaN	10360	3713	14071
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14076	36.193	NaN	4893.6	30	0	419.68	0.106	+			21653	KPVDPIVGY	9	68	494.2782272071881	986.5419014811762	2	494.2787780761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KPVDPIVGY_	COL12A1|p.F2273Lfs*20|1|0.26|ENSG00000111799|chr6:75124000-75124000|A/-|frameshift_variant;COL12A1|p.G2777Wfs*37|1|0.15|ENSG00000111799|chr6:75102684-75102685|-/G|frameshift_variant;COL12A1|p.G3027Wfs*19|1|0.1|ENSG00000111799|chr6:75087680-75087681|-/G|frameshift_variant;COL12A1|p.I210Nfs*4|1|0.18|ENSG00000111799|chr6:75189581-75189582|-/T|frameshift_variant;COL12A1|p.I57T|1|0.14|ENSG00000111799|chr6:75194851-75194851|A/G|missense_variant;COL12A1|p.L2085Hfs*4|1|0.22|ENSG00000111799|chr6:75128382-75128383|-/T|frameshift_variant;COL12A1|p.P2307Lfs*21|1|0.25|ENSG00000111799|chr6:75123356-75123356|G/-|frameshift_variant;COL12A1|p.R56I|1|0.31|ENSG00000111799|chr6:75194854-75194854|C/A|missense_variant;COL12A1|p.T1046Qfs*7|2|0.22|ENSG00000111799|chr6:75156372-75156372|G/-|frameshift_variant;ENSG00000111799|ENST00000322507|COL12A1;nc|ENSG00000111799|Q99715-4|COL12A1	53.351449002276354	0.2690372970092375	4				NaN	NaN	0	NaN	10361	3713	14071
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14077	36.195	NaN	6138.3	30	0	336.72	0.106				-1	 	0	73	535.7606786211537	1069.5068043091073	2	535.7616577148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10362	3713	14071
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14078	36.196	NaN	6428	30	0	388.27	0.035	+			34916	SAAESFMKY	9	76	517.236763920645	1032.4589749080899	2	517.2366943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SAAESFMKY_	ENSG00000007171|ENST00000313735|NOS2;nc|ENSG00000007171|P35228-2|NOS2;NOS2|p.A650Pfs*53|1|0.21|ENSG00000007171|chr17:27769063-27769063|C/-|frameshift_variant;NOS2|p.Y709*|1|0.33|ENSG00000007171|chr17:27767745-27767745|G/-|frameshift_variant	61.691277971877994	0.19951612995419254	4				NaN	NaN	0	NaN	10363	3713	14071
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14091	36.224	NaN	30777	30	0	8303.3	0.214				-1	 	0	84	520.3102082861058	1038.6058636390114	2	520.3109130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10373	3716	14090
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14092	36.227	NaN	9772	30	0	2435.5	0.106	+			45128	TVKNRGESH	9	79	514.2679949775932	1026.5214370219862	2	514.26904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVKNRGESH_	ENST00000541607.1_1_9:37575600-37576341:-|nuORF	79.45101966838831	0.09992237243120712	4				NaN	NaN	0	NaN	10374	3716	14090
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14093	36.229	NaN	11757	30	0	5695.9	0.106			+	17950	IGQAAVYFQRL	11	58	422.57102234097715	1264.6912376231314	3	422.5714111328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IGQAAVYFQRL_	REV__ENSG00000198734|ENST00000367797|F5;REV__F5|p.G1754Efs*13|1|0.41|ENSG00000198734|chr1:169529768-169529768|T/-|frameshift_variant;REV__F5|p.S1606Pfs*5|1|0.07|ENSG00000198734|chr1:169536662-169536663|-/CTGAAGTGGA|frameshift_variant	36.31764250033197	0.6083289427130232	4				NaN	NaN	0	NaN	10375	3716	14090
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14094	36.231	NaN	9382.5	30	0	1259.7	0.106			+	-1	ERTPCVTSAP	10	84	559.2686623983881	1116.522771863576	2	559.2713012695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_ERTPC(Carbamidomethyl (C))VTSAP_	REV__ENSG00000102145|ENST00000376670|GATA1;REV__nc|ENSG00000102145|P15976-2|GATA1;REV__nc|ENSG00000102145|P15976-3|GATA1	44.377184641726394	0.5088115166961078	4				NaN	NaN	0	NaN	10376	3716	14090
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14095	36.233	NaN	5276.5	30	0	771.92	0.106	+			18615	ISSLFPTRA	9	65	496.2816244052225	990.548695877245	2	496.2818298339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ISSLFPTRA_	ENSG00000179709|ENST00000291971|NLRP8;nc|ENSG00000179709|Q86W28-2|NLRP8;NLRP8|p.E440A|1|0.21|ENSG00000179709|chr19:55955377-55955377|A/C|missense_variant;NLRP8|p.F1005Sfs*20|1|0.05|ENSG00000179709|chr19:55979528-55979528|C/-|frameshift_variant	44.377184641726394	0.36891676396732553	4				NaN	NaN	0	NaN	10377	3716	14090
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14096	36.235	NaN	4876.6	30	0	393.51	0.036	+			6567	AYLDSTERF	9	77	551.2634816987988	1100.5124104643976	2	551.2642211914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AYLDSTERF_	CUL5|p.N565Ifs*18|1|0.28|ENSG00000166266|chr11:108094931-108094931|A/-|frameshift_variant;CUL5|p.N565Kfs*3|1|0.32|ENSG00000166266|chr11:108094930-108094931|-/A|frameshift_variant;ENSG00000166266|ENST00000393094|CUL5	75.04331003522576	0.118981335847003	4				NaN	NaN	0	NaN	10378	3716	14090
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14097	36.235	NaN	10195	30	0	1636.5	0.139	+			48327	VTFVKSEE	8	73	469.74438836678064	937.4742238003613	2	469.7447204589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VTFVKSEE_	ENSG00000163380|ENST00000420581|LMOD3;LMOD3|p.I213Yfs*4|1|0.13|ENSG00000163380|chr3:69119718-69119718|T/-|frameshift_variant;nc|ENSG00000163380|Q0VAK6-2|LMOD3	94.00642277110589	0.2653416297186628	4				NaN	NaN	0	NaN	10379	3716	14090
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14110	36.264	NaN	53118	30	0	17341	0.214	+			51010	YIYDGELVSK	10	86	593.8024672008532	1185.5903814685064	2	593.8031616210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YIYDGELVSK_	ENSG00000117620|ENST00000533028|SLC35A3;nc|ENSG00000283761|Q9Y2D2-2|SLC35A3	140.11223852658463	0.010724162804194332	4				NaN	NaN	0	NaN	10389	3719	14109
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14111	36.268	NaN	44878	30	0	4359.1	0.106	+			39231	STAKHSTTRG	10	85	523.2734950482161	1044.532437163232	2	524.7782592773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STAKHSTTRG_	SIPA1L1|p.A565T|1|0.21|ENSG00000197555|chr14:71624111-71624111|G/A|missense_variant	71.87747018426188	0.26198133118427214	4				NaN	NaN	0	NaN	10390	3719	14109
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14112	36.269	NaN	31734	30	0	2649.5	0.106	+			38112	SPVSKGILQY	10	86	546.3074351364585	1090.6003173397169	2	546.3077392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SPVSKGILQY_	ENSG00000167325|ENST00000300738|RRM1	91.26522074875469	0.12383023862516404	4				NaN	NaN	0	NaN	10391	3719	14109
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14113	36.271	NaN	17352	30	0	2003.7	0.106				-1	 	0	81	464.7817247810213	927.5488966288426	2	464.7818298339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10392	3719	14109
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14114	36.273	NaN	7103.4	30	0	1056.1	0.106	+			24842	LIYVAGGLTK	10	72	517.8150331662035	1033.615513399207	2	517.8154907226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LIYVAGGLTK_	ENSG00000114796|ENST00000242810|KLHL24;nc|ENSG00000114796|Q6TFL4-2|KLHL24	51.19269402634007	0.44601001148513897	4				NaN	NaN	0	NaN	10393	3719	14109
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14115	36.275	NaN	6328.2	30	0	585.69	0.034	+			27147	MAVRLIAEG	9	71	480.27040951221073	958.5262660912215	2	480.2706604003906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MAVRLIAEG_	ENST00000484724.5_1_3:125872139-125877285:-|nuORF	58.78195531508484	0.22376836668196862	4				NaN	NaN	0	NaN	10394	3719	14109
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14116	36.275	NaN	5574.4	30	0	499.88	0.143	+			40486	STYEQVDLIGK	11	77	626.8239054180349	1251.6332579028697	2	626.8248901367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STYEQVDLIGK_	ENSG00000165732|ENST00000354185|DDX21;nc|ENSG00000165732|Q9NR30-2|DDX21	147.30332882356183	7.500266899103772E-05	4				NaN	NaN	0	NaN	10395	3719	14109
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14124	36.296	NaN	15625	30	0	3767.8	0.214	+			37622	SLQATLLLK	9	73	493.81541591542435	985.6162788976487	2	493.81561279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLQATLLLK_	nc|ENSG00000197520|A6PVY3-2|FAM177B	91.26522074875469	0.06129826844580791	4				NaN	NaN	0	NaN	10400	3722	14123
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14125	36.3	NaN	32896	30	0	2284.1	0.106	+			26097	LSNIERLK	8	95	486.7949459838303	971.5753390344606	2	486.79522705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSNIERLK_	ENSG00000125733|ENST00000313244|TRIP10;ENST00000595305.5_1_19:6739772-6750443:+|nuORF;ENST00000600677.5_1_19:6744980-6751219:+|nuORF;nc|ENSG00000125733|Q15642-2|TRIP10;nc|ENSG00000125733|Q15642-3|TRIP10;nc|ENSG00000125733|Q15642-4|TRIP10	71.87747018426188	0.391254423828572	4				NaN	NaN	0	NaN	10401	3722	14123
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14126	36.302	NaN	14719	30	0	3309.3	0.106	+			31059	QEYAQVIKM	9	78	555.2859807719685	1108.557408610737	2	555.2869262695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QEYAQVIKM_	ENSG00000173674|ENST00000379607|EIF1AX;ENSG00000198692|ENST00000361365|EIF1AY;ENST00000465253.1_1_Y:22737757-22750047:+|nuORF	88.17693792209575	0.07000514020414955	4				NaN	NaN	0	NaN	10402	3722	14123
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14127	36.304	NaN	15878	30	0	2331.8	0.106				-1	 	0	69	575.8500121097472	1149.6854712862944	2	575.85107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10403	3722	14123
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14128	36.305	NaN	9691.8	30	0	1143.2	0.106			+	10926	FDLVSHVTI	9	78	515.7817474503723	NaN	0	515.7818603515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FDLVSHVTI_	REV__COL20A1|p.G1120Afs*17|1|0.32|ENSG00000101203|chr20:63325673-63325673|C/-|frameshift_variant;REV__COL20A1|p.L895Yfs*27|1|0.14|ENSG00000101203|chr20:63319072-63319072|C/-|frameshift_variant;REV__COL20A1|p.P1149Lfs*53|1|0.06|ENSG00000101203|chr20:63326135-63326135|C/-|frameshift_variant;REV__COL20A1|p.P560Rfs*9|2|0.11|ENSG00000101203|chr20:63311925-63311925|C/-|frameshift_variant;REV__COL20A1|p.R561Efs*168|2|0.4|ENSG00000101203|chr20:63311924-63311925|-/C|frameshift_variant;REV__ENSG00000101203|ENST00000358894|COL20A1;REV__ENST00000479501.5_1_20:61926459-61943880:+|nuORF;REV__nc|ENSG00000101203|Q9P218-2|COL20A1;REV__nc|ENSG00000101203|Q9P218-3|COL20A1	44.116797842482775	0.2472372736944149	4				NaN	NaN	0	NaN	10404	3722	14123
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14129	36.307	NaN	11170	30	0	2872.9	0.106	+			39119	SSTMWTTLK	9	73	527.764577475535	1053.51460201787	2	527.7657470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSTMWTTLK_	ENST00000587750.5_1_17:76198611-76202102:+|nuORF;ENST00000589664.5_1_17:76200913-76202102:+|nuORF	120.8684288430529	0.02067403653475984	4				NaN	NaN	0	NaN	10405	3722	14123
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14130	36.309	NaN	7590.2	30	0	1045.8	0.034	+			42240	TAAPGRFSF	9	66	477.24515696275523	952.4757609923105	2	477.2453918457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TAAPGRFSF_	DCTPP1|p.E15D|1|0.42|ENSG00000179958|chr16:30429936-30429936|C/A|missense_variant;DCTPP1|p.Q82Kfs*25|1|0.35|ENSG00000179958|chr16:30424502-30424502|G/-|frameshift_variant;ENSG00000179958|ENST00000319285|DCTPP1;ENST00000565758.1_1_16:30441199-30441310:-|nuORF	42.86426827375447	0.38666266728046506	4				NaN	NaN	0	NaN	10406	3722	14123
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14139	36.328	NaN	72424	30	0	13461	0.213	+			49609	VYGSFASKL	9	98	486.26291460687037	970.5112762805408	2	486.2630920410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYGSFASKL_	ENSG00000155096|ENST00000337198|AZIN1	129.42129120953632	0.01549634589885217	4				NaN	NaN	0	NaN	10412	3725	14138
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14140	36.332	NaN	23826	30	0	2844.1	0.106	+			42297	TAERGLIVY	9	86	511.2868864434639	1020.5592199537278	2	511.287841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAERGLIVY_	ENSG00000101146|ENST00000395841|RAE1;RAE1|p.N351Ifs*12|2|0.32|ENSG00000101146|chr20:57378037-57378037|A/-|frameshift_variant;RAE1|p.P248Rfs*29|2|0.32|ENSG00000101146|chr20:57373570-57373570|C/-|frameshift_variant	64.20726635412375	0.17854274437659667	4				NaN	NaN	0	NaN	10413	3725	14138
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14141	36.334	NaN	9593.1	30	0	1651.8	0.106	+			45571	TYMGHTGAVW	10	81	561.7550367708845	1121.495520608569	2	561.7559814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TYMGHTGAVW_	ENSG00000084623|ENST00000677711|EIF3I;ENST00000474371.1_1_1:32688150-32694122:+|nuORF;ENST00000489353.5_1_1:32688042-32691823:+|nuORF	101.60071028292904	0.07294315263144992	4				NaN	NaN	0	NaN	10414	3725	14138
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14142	36.336	NaN	10989	30	0	1127.2	0.106	+			12398	GEAEFNRIM	9	83	533.7528802764094	1065.4912076196188	2	533.7534790039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEAEFNRIM_	ENSG00000130402|ENST00000252699|ACTN4;ENST00000497637.5_1_19:39218501-39220069:+|nuORF;nc|ENSG00000130402|O43707-2|ACTN4;nc|ENSG00000130402|O43707-3|ACTN4	77.31757898189308	0.1091473830098891	4				NaN	NaN	0	NaN	10415	3725	14138
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14143	36.337	NaN	12462	30	0	1351.6	0.106	+			11359	FLGVCLGMQL	10	84	540.7817861305858	1079.5490193279716	2	540.7826538085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FLGVCLGMQL_	CTPS1|p.D577*|1|0.1|ENSG00000171793|chr1:41010192-41010193|-/C|frameshift_variant;CTPS2|p.L488Pfs*6|1|0.03|ENSG00000047230|chrX:16617235-16617236|-/A|frameshift_variant;ENSG00000047230|ENST00000359276|CTPS2;ENSG00000171793|ENST00000650070|CTPS1;ENST00000463285.5_1_1:41461708-41469783:+|nuORF;nc|ENSG00000171793|P17812-2|CTPS1	53.351449002276354	0.42630798468005626	4				NaN	NaN	0	NaN	10416	3725	14138
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14144	36.339	NaN	7580.8	30	0	1194.7	0.106	+			47481	VQCPVFNIK	9	80	552.7966949106657	1103.5788368881313	2	552.7979125976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_VQC(Carbamidomethyl (C))PVFNIK_	ENST00000310015.10_1_2:174820725-174820848:-|nuORF	90.77665401227738	0.06267569666681755	4				NaN	NaN	0	NaN	10417	3725	14138
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14145	36.341	NaN	5129.2	30	0	594.74	0.034	+			47706	VSFGESVLK	9	64	483.26864479317373	NaN	0	483.2687072753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VSFGESVLK_	ENSG00000105856|ENST00000222574|HBP1;nc|ENSG00000105856|O60381-2|HBP1;nc|ENSG00000105856|O60381-3|HBP1	99.01295224348159	0.023427377858318825	4				NaN	NaN	0	NaN	10418	3725	14138
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14157	36.366	NaN	8693.3	30	0	797.8	0.214	+			50563	YAVHEGLGL	9	86	479.75267473700825	957.4907965408165	2	479.7529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YAVHEGLGL_	ENSG00000125630|ENST00000263331|POLR1B;nc|ENSG00000125630|Q9H9Y6-2|POLR1B;nc|ENSG00000125630|Q9H9Y6-3|POLR1B;nc|ENSG00000125630|Q9H9Y6-5|POLR1B;POLR1B|p.F613Lfs*14|1|0.08|ENSG00000125630|chr2:112568055-112568055|T/-|frameshift_variant;POLR1B|p.I264Sfs*26|1|0.05|ENSG00000125630|chr2:112551802-112551803|-/GTAAACTC|frameshift_variant;POLR1B|p.K311Nfs*26|1|0.28|ENSG00000125630|chr2:112551942-112551942|A/-|frameshift_variant	106.41520541750704	0.03265588207292361	4				NaN	NaN	0	NaN	10427	3728	14156
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14158	36.369	NaN	6823.6	30	0	432.08	0.106	+			6548	AYINKVEEL	9	83	539.7924194047248	1077.5702858762495	2	539.7928466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AYINKVEEL_	DBI|p.K82N|1|0.47|ENSG00000155368|chr2:119372300-119372300|G/T|missense_variant;DBI|p.Y85Ifs*19|1|0.22|ENSG00000155368|chr2:119372300-119372301|-/A|frameshift_variant;ENSG00000155368|ENST00000355857|DBI;nc|ENSG00000155368|P07108-2|DBI;nc|ENSG00000155368|P07108-3|DBI;nc|ENSG00000155368|P07108-4|DBI;nc|ENSG00000155368|P07108-5|DBI	107.00750918261382	0.032051501805654005	4				NaN	NaN	0	NaN	10428	3728	14156
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14159	36.371	NaN	5582.3	30	0	1030.4	0.106				-1	 	0	62	463.2492281514073	924.4839033696146	2	463.2495422363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10429	3728	14156
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14160	36.373	NaN	14922	30	0	1340.1	0.106	+			3401	ASQELWLNH	9	79	549.2718856531986	1096.5292183731972	2	549.2730712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASQELWLNH_	ENSG00000105732|ENST00000359044|ZNF574;nc|ENSG00000105732|Q6ZN55-2|ZNF574	134.7655990226056	0.012935733000282069	4				NaN	NaN	0	NaN	10430	3728	14156
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14161	36.375	NaN	5861.4	30	0	859.89	0.106			+	22499	KTPDVTPLVDK	11	75	606.8452087644104	1211.6758645956206	2	606.8455200195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KTPDVTPLVDK_	REV__ENSG00000151327|ENST00000280987|FAM177A1;REV__nc|ENSG00000151327|Q8N128|FAM177A1	36.31764250033197	0.6083289427130232	4				NaN	NaN	0	NaN	10431	3728	14156
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14162	36.377	NaN	6222	30	0	516.17	0.106			+	46671	VGGLHAVF	8	54	400.22637672965857	798.4382005261172	2	400.2266540527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VGGLHAVF_	REV__ENSG00000141314|ENST00000269051|RHBDL3;REV__nc|ENSG00000141314|P58872-2|RHBDL3;REV__nc|ENSG00000141314|P58872-3|RHBDL3	43.626045697637714	0.6338121648150432	4				NaN	NaN	0	NaN	10432	3728	14156
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14163	36.379	NaN	5141.7	30	0	706.56	0.038	+			49031	VVHGGMSIFLK	11	72	396.5579600823495	1186.6520508472486	3	396.5584716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VVHGGMSIFLK_	ENST00000264995.7_1_3:131220431-131221595:-|nuORF	63.42647028704847	0.292869158926425	4				NaN	NaN	0	NaN	10433	3728	14156
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14173	36.4	NaN	35746	30	0	6373.4	0.214	+			43440	TGLGKYFQ	8	77	457.2421089758374	912.4696650184749	2	457.24212646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TGLGKYFQ_	ENSG00000180881|ENST00000699294|CAPS2;ENST00000409004.5_1_12:75670025-75710066:-|nuORF;nc|ENSG00000180881|Q9BXY5-2|CAPS2;nc|ENSG00000180881|Q9BXY5-3|CAPS2;nc|ENSG00000180881|Q9BXY5-5|CAPS2;nc|ENSG00000180881|Q9BXY5|CAPS2	71.29570347882199	0.39610197767395533	4				NaN	NaN	0	NaN	10440	3731	14172
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14174	36.404	NaN	20659	30	0	5886.4	0.106	+			43366	TGEAMLVIK	9	82	481.27267866060726	960.5308043880145	2	481.272705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TGEAMLVIK_	tr|U7T480|U7T480_FUSNUhistidinekinaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00375PE=4SV=1	118.74307786436346	0.02196067127630568	4				NaN	NaN	0	NaN	10441	3731	14172
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14175	36.405	NaN	23850	30	0	5968.8	0.106			+	7891	DRSSKREK	8	78	503.27426189593854	1004.5339708586771	2	503.2716064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DRSSKREK_	REV__ACTR3B-JMJD1C|1|fusion;REV__ENSG00000171988|ENST00000399262|JMJD1C;REV__JMJD1C|p.A2114Cfs*5|1|0.04|ENSG00000171988|chr10:63189399-63189400|-/T|frameshift_variant;REV__JMJD1C|p.I2113Kfs*18|1|0.04|ENSG00000171988|chr10:63189400-63189401|-/TT|frameshift_variant;REV__nc|ENSG00000171988|Q15652-3|JMJD1C	79.71258880314673	0.32596852995588826	4				NaN	NaN	0	NaN	10442	3731	14172
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14176	36.407	NaN	13927	30	0	1579.3	0.106	+			1447	AEYTAKIAL	9	72	490.2761610459294	978.5377691586589	2	490.27618408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEYTAKIAL_	ENSG00000092820|ENST00000367075|EZR	104.0567914643314	0.03506238181059741	4				NaN	NaN	0	NaN	10443	3731	14172
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14177	36.409	NaN	8862.6	30	0	1737.3	0.106			+	42934	TEILKQTL	8	82	473.2825465149479	944.5505400966958	2	473.2839660644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TEILKQTL_	REV__ENSG00000090060|ENST00000216277|PAPOLA;REV__ENST00000554130.5_1_14:96968887-96993844:+|nuORF;REV__nc|ENSG00000090060|P51003-2|PAPOLA	85.16082228582465	0.29211966821764696	4				NaN	NaN	0	NaN	10444	3731	14172
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14178	36.411	NaN	21366	30	0	8791.9	0.106				-1	 	0	72	355.19005807014616	1062.5483448106386	3	355.1904602050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10445	3731	14172
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14179	36.413	NaN	14935	30	0	1975.4	0.037	+			2356	AMYTYFQAK	9	86	561.767535096304	NaN	0	561.7682495117188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AMYTYFQAK_	ENSG00000116260|ENST00000367602|QSOX1	118.74307786436346	0.002324367518139777	4				NaN	NaN	0	NaN	10446	3731	14172
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14188	36.432	NaN	34278	30	0	10173	0.214	+			17099	HSGPVIPVY	9	67	484.76315259993225	967.5117522666645	2	484.7632751464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HSGPVIPVY_	ENSG00000114315|ENST00000232424|HES1	101.21157088398209	0.03796561369277615	4				NaN	NaN	0	NaN	10452	3734	14187
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14189	36.436	NaN	17835	30	0	3397.6	0.106			+	22161	KSSAILKAPD	10	77	515.3001178783896	1028.5856828235792	2	515.300537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KSSAILKAPD_	REV__tr|U7T076|U7T076_FUSNUUDP-glucose4-epimeraseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00758PE=3SV=1	59.93077597824379	0.36646980200755325	4				NaN	NaN	0	NaN	10453	3734	14187
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14190	36.438	NaN	5972.3	30	0	967.33	0.106			+	10663	EYRGQSEASKM	11	74	651.2938564048835	1300.573159876567	2	651.2952270507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_EYRGQSEASKM(Oxidation (M))_	REV__ENSG00000129493|ENST00000543095|HEATR5A;REV__ENST00000549185.5_3_14:31803609-31872202:-|nuORF;REV__HEATR5A|p.A970Vfs*19|1|0.07|ENSG00000129493|chr14:31345236-31345237|-/AGCTA|frameshift_variant;REV__HEATR5A|p.S334Lfs*4|1|0.18|ENSG00000129493|chr14:31387309-31387309|A/-|frameshift_variant;REV__nc|ENSG00000129493|Q86XA9-2|HEATR5A;REV__nc|ENSG00000129493|Q86XA9|HEATR5A	75.04331003522576	0.19369523587789836	4				NaN	NaN	0	NaN	10454	3734	14187
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14191	36.44	NaN	8871.2	30	0	598.16	0.106			+	-1	MICLVEVLS	9	87	532.2819338575016	1062.549314781803	2	532.282470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_MIC(Carbamidomethyl (C))LVEVLS_	REV__ENST00000502976.5_1_3:128889071-128889110:-|nuORF	55.50420428727701	0.2510918378945873	4				NaN	NaN	0	NaN	10455	3734	14187
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14192	36.442	NaN	7707.9	30	0	412.18	0.106	+			38113	SPVSKGILQY	10	77	546.3074351364585	1090.6003173397169	2	546.3084716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SPVSKGILQY_	ENSG00000167325|ENST00000300738|RRM1	45.02220120713402	0.5028680121232791	4				NaN	NaN	0	NaN	10456	3734	14187
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14193	36.443	NaN	4416.6	30	0	479.15	0.106	+			47874	VSLGLVVSK	9	62	451.2889918824868	900.5634308317736	2	451.2891845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VSLGLVVSK_	ENSG00000185947|ENST00000300870|ZNF267;ENST00000566541.5_3_16:31886566-31901532:+|nuORF;ZNF267|p.L310Sfs*2|1|0.08|ENSG00000185947|chr16:31915175-31915176|-/T|frameshift_variant	68.84614121027924	0.14577793175421136	4				NaN	NaN	0	NaN	10457	3734	14187
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14194	36.445	NaN	3235.7	30	0	714.37	0.035			+	18021	IILENHVAV	9	42	336.53426418257783	NaN	0	336.5342712402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IILENHVAV_	REV__ENSG00000151025|ENST00000376351|GPR158;REV__GPR158|p.A1124Lfs*2|1|0.07|ENSG00000151025|chr10:25598987-25598987|C/-|frameshift_variant;REV__GPR158|p.K1143Rfs*23|1|0.32|ENSG00000151025|chr10:25599048-25599048|A/-|frameshift_variant	18.324413293986947	0.3749620627292244	4				NaN	NaN	0	NaN	10458	3734	14187
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14212	36.482	NaN	6999.5	30	0	1034.8	0.214	+			35177	SAIGRAMEL	9	72	474.25235771340226	946.4901624936045	2	474.2525939941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAIGRAMEL_	ARHGEF12|p.G1290Afs*71|1|0.09|ENSG00000196914|chr11:120480061-120480062|-/CTGCAAGAATTAAATTA|frameshift_variant;ENSG00000196914|ENST00000397843|ARHGEF12;ENST00000529970.5_1_11:120278459-120348246:+|nuORF;nc|ENSG00000196914|Q9NZN5-2|ARHGEF12	54.722347961057174	0.257609425301511	4				NaN	NaN	0	NaN	10473	3737	14211
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14213	36.486	NaN	6133	30	0	521.24	0.106	+			42355	TAIEAQHLL	9	68	498.27918726053593	994.5438215878719	2	498.279541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAIEAQHLL_	ENSG00000104812|ENST00000323798|GYS1;nc|ENSG00000104812|P13807-2|GYS1	80.45461616416974	0.09558281504443908	4				NaN	NaN	0	NaN	10474	3737	14211
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14214	36.488	NaN	4580.5	30	0	621.84	0.106	+			43979	TPFQQPSGY	9	63	512.7416564179001	1023.4687599026003	2	512.7403564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TPFQQPSGY_	ENSG00000143569|ENST00000428931|UBAP2L;nc|ENSG00000143569|Q14157-1|UBAP2L;nc|ENSG00000143569|Q14157-3|UBAP2L;nc|ENSG00000143569|Q14157-4|UBAP2L;nc|ENSG00000143569|Q14157-5|UBAP2L	53.08895987439943	0.27122541748218487	4				NaN	NaN	0	NaN	10475	3737	14211
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14215	36.489	NaN	3307.5	30	0	1861.7	0.106				-1	 	0	41	329.20106286843975	656.3875728036795	2	329.201416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10476	3737	14211
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14216	36.491	NaN	3479.1	30	0	718.28	0.106			+	7835	DPVVAQYQ	8	51	460.2293894462292	NaN	0	460.2290954589844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DPVVAQYQ_	REV__ENSG00000089902|ENST00000262241|RCOR1;REV__RCOR1|p.E299Kfs*40|1|0.42|ENSG00000089902|chr14:102714453-102714453|A/-|frameshift_variant;REV__RCOR1|p.N307Ifs*32|1|0.37|ENSG00000089902|chr14:102714480-102714480|A/-|frameshift_variant;REV__RCOR1|p.R311Gfs*28|1|0.35|ENSG00000089902|chr14:102714491-102714491|A/-|frameshift_variant	33.51558372728122	1.7418937515398478	4				NaN	NaN	0	NaN	10477	3737	14211
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14217	36.493	NaN	2194.7	30	0	491.39	0.037			+	47609	VRVPKKMDK	9	52	367.55729156070896	NaN	0	367.55767822265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VRVPKKMDK_	REV__ENSG00000168724|ENST00000648817|DNAJC21;REV__ENST00000506762.1_1_5:34950367-34954151:+|nuORF;REV__ENST00000509626.1_1_5:34954007-34954816:+|nuORF;REV__nc|ENSG00000168724|Q5F1R6-2|DNAJC21;REV__nc|ENSG00000168724|Q5F1R6-3|DNAJC21	30.503639358989545	0.3235605894931338	4				NaN	NaN	0	NaN	10478	3737	14211
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14218	36.494	NaN	5001.7	30	0	357.84	0.141				-1	 	0	79	535.7606786211537	1069.5068043091073	2	535.7620239257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10479	3737	14211
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14225	36.513	NaN	14693	30	0	2914	0.214	+			8233	EAEVGASRAR	10	87	523.2734950482161	1044.532437163232	2	523.27490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EAEVGASRAR_	ENST00000588450.1_1_19:2235759-2236247:-|nuORF	75.04331003522576	0.23611669241777622	4				NaN	NaN	0	NaN	10483	3740	14224
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14226	36.517	NaN	13927	30	0	1166.1	0.106	+			23570	LALLGAPPPK	10	82	488.8126918146411	975.6108306960822	2	488.8132629394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LALLGAPPPK_	ENST00000595973.2_1_19:18493140-18496906:+|nuORF	63.30626980617807	0.33577009411590547	4				NaN	NaN	0	NaN	10484	3740	14224
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14227	36.519	NaN	9284.1	30	0	886.21	0.106				-1	RICASLVL	8	81	466.2718699339956	930.5291869347913	2	466.2763977050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_RIC(Carbamidomethyl (C))ASLVL_	NBPF4|p.R591C|1|0.25|ENSG00000196427|chr1:108226783-108226783|G/A|missense_variant	71.29570347882199	0.39610197767395533	4				NaN	NaN	0	NaN	10485	3740	14224
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14228	36.521	NaN	13440	30	0	2009.7	0.106	+			8782	EEIKTWGTV	9	81	531.779053394446	NaN	0	531.7794189453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EEIKTWGTV_	ENSG00000129167|ENST00000682019|TPH1;nc|ENSG00000129167|P17752-2|TPH1	47.95952297671804	0.22075498469600283	4				NaN	NaN	0	NaN	10486	3740	14224
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14229	36.522	NaN	3066.9	30	0	212.91	0.106	+			17331	IAIDGGKVL	9	54	443.27392094061196	884.5332889480239	2	443.2738952636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IAIDGGKVL_	ENSG00000132952|ENST00000255304|USPL1;USPL1|p.N138S|1|0.29|ENSG00000132952|chr13:30631019-30631019|A/G|missense_variant	74.25504064058377	0.12238981753128622	4				NaN	NaN	0	NaN	10487	3740	14224
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14230	36.524	NaN	9961.6	30	0	1108.9	0.106	+			17626	IEIYVQKV	8	86	496.29442908484384	990.5743052364877	2	496.294677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IEIYVQKV_	CLTC|p.A1374*|1|0.05|ENSG00000141367|chr17:59683464-59683465|-/TA|frameshift_variant;CLTCL1|p.H915Ifs*56|1|0.35|ENSG00000070371|chr22:19221430-19221430|G/-|frameshift_variant;ENSG00000070371|ENST00000427926|CLTCL1;ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000070371|P53675-2|CLTCL1;nc|ENSG00000141367|Q00610-2|CLTC	101.60071028292904	0.24979566554663588	4				NaN	NaN	0	NaN	10488	3740	14224
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14231	36.526	NaN	2947.9	30	0	603.23	0.037			+	17415	IASLTSGP	8	58	373.2099491294646	NaN	0	373.20989990234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IASLTSGP_	REV__ENST00000475007.5_1_7:150500316-150501569:+|nuORF	26.79610172149135	1.7418937515398478	4				NaN	NaN	0	NaN	10489	3740	14224
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14239	36.544	NaN	48562	30	0	11000	0.214	+			19082	IYIGGQEHF	9	93	532.263595414828	1062.512637896456	2	532.2645263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IYIGGQEHF_	ENSG00000158125|ENST00000379416|XDH;XDH|p.Q919Rfs*10|1|0.37|ENSG00000158125|chr2:31350104-31350104|C/-|frameshift_variant	153.03582135801034	0.006161527642367307	4				NaN	NaN	0	NaN	10494	3743	14238
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14240	36.548	NaN	7868	30	0	659.83	0.106	+			46188	VDWLTEKM	8	75	519.2526490548106	1036.4907451764211	2	519.2527465820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_VDWLTEKM(Oxidation (M))_	ENSG00000141543|ENST00000649764|EIF4A3;ENSG00000156976|ENST00000323963|EIF4A2;ENSG00000161960|ENST00000293831|EIF4A1;ENST00000429589.5_1_3:186502413-186505273:+|nuORF;ENST00000468362.5_1_3:186503755-186505556:+|nuORF;ENST00000475653.5_1_3:186502413-186505086:+|nuORF;ENST00000492144.5_1_3:186503809-186505672:+|nuORF;ENST00000497177.1_1_3:186504924-186505672:+|nuORF;ENST00000575978.1_1_17:78111144-78112096:-|nuORF;ENST00000578324.5_1_17:7477602-7481249:+|nuORF;ENST00000581544.5_1_17:7477924-7481249:+|nuORF;ENST00000581621.1_1_17:7476159-7481249:+|nuORF;nc|ENSG00000156976|Q14240-2|EIF4A2;nc|ENSG00000161960|P60842-2|EIF4A1	131.03138772384656	0.22501736558723914	4				NaN	NaN	0	NaN	10495	3743	14238
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14241	36.55	NaN	6759.7	30	0	694.05	0.106	+			1126	AELQEVVKV	9	78	507.7941274110032	1013.5737018888065	2	507.7955017089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AELQEVVKV_	CDC5L|p.Q359Cfs*22|1|0.06|ENSG00000096401|chr6:44408614-44408615|-/TG|frameshift_variant;ENSG00000096401|ENST00000371477|CDC5L	93.5975768576971	0.05472259948179787	4				NaN	NaN	0	NaN	10496	3743	14238
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14242	36.551	NaN	6429.7	30	0	947.85	0.106	+			46208	VEAGGMQAL	9	64	438.2176573817742	874.4207618303484	2	438.2178649902344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VEAGGMQAL_	ENSG00000168036|ENST00000349496|CTNNB1;ENSG00000173801|ENST00000393931|JUP	113.41158876095287	0.025516849225023126	4				NaN	NaN	0	NaN	10497	3743	14238
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14243	36.553	NaN	6929.5	30	0	1078.9	0.106			+	-1	LEKCLTAAM	9	82	526.7607314402057	1051.5069099472114	2	526.76220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C),Oxidation (M)	_LEKC(Carbamidomethyl (C))LTAAM(Oxidation (M))_	REV__ENST00000263063.8_1_10:30602469-30602541:-|nuORF	51.33545320467046	0.2872990594074956	4				NaN	NaN	0	NaN	10498	3743	14238
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14244	36.555	NaN	8089.1	30	0	804.51	0.106	+			655	AEAEKVLAL	9	73	472.2760021286051	942.5374513240102	2	472.27655029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEAEKVLAL_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	72.87924865735499	0.12833875048249987	4				NaN	NaN	0	NaN	10499	3743	14238
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14245	36.557	NaN	10243	30	0	1077.8	0.037	+			51587	YYNKVSTVF	9	79	560.786790657693	1119.559028382186	2	560.7871704101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YYNKVSTVF_	ENSG00000107581|ENST00000369144|EIF3A;nc|ENSG00000107581|Q14152-2|EIF3A	80.45461616416974	0.09558281504443908	4				NaN	NaN	0	NaN	10500	3743	14238
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14254	36.576	NaN	24909	30	0	4945	0.214	+			15391	GTYDILVTK	9	82	505.28140384409846	1008.548254754997	2	505.2818603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTYDILVTK_	ENSG00000114302|ENST00000265563|PRKAR2A;nc|ENSG00000114302|P13861-2|PRKAR2A	126.24258497203832	0.01742065577488747	4				NaN	NaN	0	NaN	10506	3746	14253
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14255	36.58	NaN	16153	30	0	1841.8	0.106	+			35516	SAVDVHINM	9	75	493.24172508900864	984.4688972448173	2	493.2420654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAVDVHINM_	ENSG00000204463|ENST00000676615|BAG6;nc|ENSG00000204463|P46379-2|BAG6;nc|ENSG00000204463|P46379-4|BAG6;nc|ENSG00000204463|P46379-5|BAG6;nc|ENSG00000204463|P46379|BAG6	104.0567914643314	0.03506238181059741	4				NaN	NaN	0	NaN	10507	3746	14253
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14256	36.582	NaN	21936	30	0	2180.1	0.106	+			45542	TYKVISNEF	9	82	550.7845281759858	1099.5545034187714	2	550.78515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TYKVISNEF_	ENSG00000114062|ENST00000648336|UBE3A;ENST00000429033.1_1_21:32434669-32435362:-|nuORF;nc|ENSG00000114062|Q05086-2|UBE3A;nc|ENSG00000114062|Q05086|UBE3A	125.71293069911285	0.017741295328254008	4				NaN	NaN	0	NaN	10508	3746	14253
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14257	36.584	NaN	6528.2	30	0	718.08	0.106	+			23236	KYIDQKFVL	9	76	577.3339941663603	1152.6534353995205	2	577.3348388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KYIDQKFVL_	ENSG00000078304|ENST00000694906|PPP2R5C;ENSG00000112640|ENST00000485511|PPP2R5D;ENSG00000154001|ENST00000337537|PPP2R5E;ENST00000467447.1_1_6:42974755-42975804:+|nuORF;ENST00000495716.1_1_3:52407964-52408519:+|nuORF;nc|ENSG00000078304|Q13362-2|PPP2R5C;nc|ENSG00000078304|Q13362-3|PPP2R5C;nc|ENSG00000078304|Q13362-4|PPP2R5C;nc|ENSG00000078304|Q13362-5|PPP2R5C;nc|ENSG00000078304|Q13362|PPP2R5C;nc|ENSG00000112640|Q14738-2|PPP2R5D;nc|ENSG00000112640|Q14738-3|PPP2R5D;nc|ENSG00000154001|Q16537-2|PPP2R5E;nc|ENSG00000154001|Q16537-3|PPP2R5E;PPP2R5C|p.H504Qfs*14|1|0.07|ENSG00000078304|chr14:101925207-101925208|-/A|frameshift_variant;PPP2R5E|p.K449Nfs*7|1|0.22|ENSG00000154001|chr14:63376066-63376066|T/-|frameshift_variant;PPP2R5E|p.T201Qfs*26|1|0.36|ENSG00000154001|chr14:63396665-63396665|T/-|frameshift_variant	88.17693792209575	0.07000514020414955	4				NaN	NaN	0	NaN	10509	3746	14253
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14258	36.586	NaN	3721.1	30	0	593.62	0.106			+	37233	SKQTRCLKGP	10	67	373.2099491294646	NaN	0	373.2098693847656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SKQTRCLKGP_	REV__DCLRE1A|p.C207Nfs*7|1|0.07|ENSG00000198924|chr10:113850487-113850488|-/TTTACAGATTTTGTTG|frameshift_variant;REV__DCLRE1A|p.K636Rfs*31|1|0.2|ENSG00000198924|chr10:113849198-113849198|T/-|frameshift_variant;REV__DCLRE1A|p.V898Wfs*37|1|0.34|ENSG00000198924|chr10:113841535-113841535|T/-|frameshift_variant;REV__ENSG00000198924|ENST00000361384|DCLRE1A	32.75053402867276	0.3926392905881664	4				NaN	NaN	0	NaN	10510	3746	14253
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14259	36.587	NaN	6478.1	30	0	418.08	0.106	+			5542	AVALINAAIQK	11	74	556.3452606825749	1110.6759684319497	2	556.3460083007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AVALINAAIQK_	ENSG00000140575|ENST00000268182|IQGAP1;IQGAP1|p.N941Ifs*8|1|0.43|ENSG00000140575|chr15:90476693-90476693|A/-|frameshift_variant;IQGAP1|p.S1529Afs*10|1|0.15|ENSG00000140575|chr15:90492665-90492665|A/-|frameshift_variant	162.25246889848123	4.887942782163736E-05	4				NaN	NaN	0	NaN	10511	3746	14253
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14260	36.589	NaN	4631.3	30	0	460.09	0.037			+	29719	PHLEQSVNVY	10	78	593.2984891104904	1184.5824252877808	2	593.8021240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PHLEQSVNVY_	REV__ENSG00000213658|ENST00000395456|LAT;REV__ENST00000562701.5_1_16:28997691-29001330:+|nuORF;REV__ENST00000564447.5_1_16:29000600-29001330:+|nuORF;REV__LAT|p.A252Lfs*10|1|0.11|ENSG00000213658|chr16:28989973-28989973|G/-|frameshift_variant;REV__nc|ENSG00000213658|O43561-3|LAT;REV__nc|ENSG00000213658|O43561-4|LAT;REV__nc|ENSG00000213658|O43561-5|LAT;REV__nc|ENSG00000213658|O43561|LAT	31.529811441608018	0.6223461015008678	4				NaN	NaN	0	NaN	10512	3746	14253
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14274	36.618	NaN	13571	30	0	3083.4	0.214	+			16697	HKLWMIVI	8	78	520.3102082861058	1038.6058636390114	2	520.3115844726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HKLWMIVI_	ADAM28|p.N75Kfs*54|1|0.14|ENSG00000042980|chr8:24309959-24309960|-/AA|frameshift_variant;ADAM28|p.N75Tfs*53|1|0.31|ENSG00000042980|chr8:24309960-24309960|A/-|frameshift_variant	35.200714571348534	0.6875396545722289	4				NaN	NaN	0	NaN	10523	3749	14273
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14275	36.622	NaN	16164	30	0	2965.4	0.106	+			28134	NAIVIHEVY	9	86	529.2860958688016	1056.557638804403	2	529.287841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NAIVIHEVY_	ENSG00000132849|ENST00000642238|PATJ;ENST00000484562.5_1_1:62228564-62579919:+|nuORF;nc|ENSG00000132849|Q8NI35-2|PATJ;nc|ENSG00000132849|Q8NI35-3|PATJ;nc|ENSG00000132849|Q8NI35-5|PATJ;nc|ENSG00000132849|Q8NI35|PATJ	98.62937762414208	0.04060045538121712	4				NaN	NaN	0	NaN	10524	3749	14273
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14276	36.624	NaN	11427	30	0	1038.9	0.106	+			51300	YSDDIPHAL	9	83	515.7451423897306	1029.4757318462612	2	515.7459716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YSDDIPHAL_	ENSG00000104408|ENST00000220849|EIF3E;ENST00000518442.5_1_8:109247181-109261015:-|nuORF	167.82442114527325	0.0031382784359891723	4				NaN	NaN	0	NaN	10525	3749	14273
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14277	36.625	NaN	4587.8	30	0	474.74	0.106	+			45351	TVSSVNEAF	9	65	477.232146809377	952.449740685554	2	477.2322998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TVSSVNEAF_	ENSG00000136045|ENST00000412830|PWP1	69.6276240434122	0.14239879520340665	4				NaN	NaN	0	NaN	10526	3749	14273
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14278	36.627	NaN	3626.6	30	0	231.06	0.106			+	2382	ANNQQKTNK	9	74	523.2734950482161	1044.532437163232	2	525.7832641601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ANNQQKTNK_	REV__ENSG00000112782|ENST00000339561|CLIC5;REV__nc|ENSG00000112782|Q9NZA1-3|CLIC5;REV__nc|ENSG00000112782|Q9NZA1|CLIC5	42.396135135203025	0.392153681582562	4				NaN	NaN	0	NaN	10527	3749	14273
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14279	36.629	NaN	4292.4	30	0	309.78	0.034	+			43147	TESPENVAL	9	74	480.2369297828524	958.4593066325049	2	480.2374572753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TESPENVAL_	ENSG00000117597|ENST00000491415|UTP25	60.11826168202944	0.21262886028301267	4				NaN	NaN	0	NaN	10528	3749	14273
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14280	36.63	NaN	4190.9	30	0	374.25	0.141				-1	 	0	70	535.7606786211537	1069.5068043091073	2	535.76416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10529	3749	14273
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14292	36.657	NaN	12438	30	0	2705.7	0.214	+			43378	TGFNGKLVY	9	71	499.76825828140693	997.5219636296139	2	499.76885986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TGFNGKLVY_	ENSG00000083857|ENST00000441802|FAT1;FAT1|p.G2934Vfs*3|2|0.37|ENSG00000083857|chr4:186617787-186617787|T/-|frameshift_variant;FAT1|p.K1225Nfs*9|1|0.03|ENSG00000083857|chr4:186636885-186636885|G/-|frameshift_variant;FAT1|p.N3847Yfs*7|1|0.03|ENSG00000083857|chr4:186601370-186601371|-/TTATA|frameshift_variant;FAT1|p.P3228Lfs*42|1|0.27|ENSG00000083857|chr4:186611556-186611556|G/-|frameshift_variant;FAT1|p.P4313Lfs*36|1|0.34|ENSG00000083857|chr4:186596602-186596602|G/-|frameshift_variant;FAT1|p.Q2933Hfs*14|1|0.33|ENSG00000083857|chr4:186617787-186617788|-/G|frameshift_variant;FAT1|p.T1364Yfs*8|1|0.23|ENSG00000083857|chr4:186636118-186636119|-/A|frameshift_variant;FAT1|p.V1878Cfs*8|2|0.22|ENSG00000083857|chr4:186620955-186620956|-/G|frameshift_variant	80.45461616416974	0.09558281504443908	4				NaN	NaN	0	NaN	10538	3752	14291
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14293	36.66	NaN	23277	30	0	4395.5	0.106			+	9983	ERKCRRTF	8	91	548.2961054805172	1094.5776580278343	2	548.2973022460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ERKCRRTF_	REV__ENST00000237163.9_1_6:83839045-83839090:+|nuORF	49.44154591367651	0.597725784090933	4				NaN	NaN	0	NaN	10539	3752	14291
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14294	36.662	NaN	14172	30	0	1295.1	0.106	+			45814	VAIIARTDL	9	79	486.29735260975036	970.5801522863007	2	486.29779052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VAIIARTDL_	ENSG00000106348|ENST00000338791|IMPDH1;ENSG00000178035|ENST00000326739|IMPDH2;ENST00000469328.5_1_7:128033063-128040541:-|nuORF;ENST00000484496.5_1_7:128032984-128040541:-|nuORF;IMPDH1|p.A247Gfs*7|1|0.06|ENSG00000106348|chr7:128398490-128398491|-/C|frameshift_variant;nc|ENSG00000106348|P20839-2|IMPDH1;nc|ENSG00000106348|P20839-3|IMPDH1;nc|ENSG00000106348|P20839-4|IMPDH1;nc|ENSG00000106348|P20839-5|IMPDH1;nc|ENSG00000106348|P20839-7|IMPDH1;nc|ENSG00000106348|P20839|IMPDH1	124.08010499294276	0.018729767491916592	4				NaN	NaN	0	NaN	10540	3752	14291
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14295	36.664	NaN	15097	30	0	2000.9	0.106	+			44630	TTFLLPGQK	9	85	502.79199985105777	1003.5694467689156	2	502.79217529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TTFLLPGQK_	ENSG00000074964|ENST00000361221|ARHGEF10L;ENST00000469726.5_1_1:17942561-18023872:+|nuORF;nc|ENSG00000074964|Q9HCE6-2|ARHGEF10L;nc|ENSG00000074964|Q9HCE6-3|ARHGEF10L;nc|ENSG00000074964|Q9HCE6-4|ARHGEF10L	54.776311868738084	0.25715957988447635	4				NaN	NaN	0	NaN	10541	3752	14291
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14296	36.666	NaN	4566.6	30	0	359.27	0.106	+			51615	YYVNGTYRL	9	67	574.789794821978	1147.565036710756	2	574.7909545898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YYVNGTYRL_	ENSG00000145860|ENST00000424310|RNF145;ENST00000518062.1_1_5:158588183-158590023:-|nuORF;nc|ENSG00000145860|Q96MT1-2|RNF145;nc|ENSG00000145860|Q96MT1-3|RNF145;nc|ENSG00000145860|Q96MT1-4|RNF145;nc|ENSG00000145860|Q96MT1-5|RNF145;RNF145|p.T570Sfs*23|1|0.07|ENSG00000145860|chr5:159158953-159158954|-/AGCATAC|frameshift_variant	66.96192283764107	0.15557981141143568	4				NaN	NaN	0	NaN	10542	3752	14291
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14297	36.668	NaN	4913.2	30	0	1205	0.033				-1	 	0	56	424.2185910828141	846.4226292324282	2	424.21893310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10543	3752	14291
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14298	36.668	NaN	2955.4	30	0	314.72	0.142	+			10758	FAFEHSEEY	9	66	579.7402230425972	1157.4658931519944	2	579.7412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FAFEHSEEY_	ENSG00000141002|ENST00000263346|TCF25;ENST00000568870.1_1_16:89958640-89960287:+|nuORF;TCF25|p.S448Lfs*3|1|0.21|ENSG00000141002|chr16:89900755-89900755|T/-|frameshift_variant	97.47269410471826	0.04379738608259218	4				NaN	NaN	0	NaN	10544	3752	14291
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14306	36.688	NaN	30365	30	0	4957.4	0.215				-1	 	0	71	507.2661118709366	1012.5176708086732	2	507.2665710449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10549	3755	14305
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14307	36.692	NaN	6207.4	30	0	1007.7	0.106				-1	 	0	62	468.796949607965	935.5793462827301	2	468.79730224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10550	3755	14305
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14308	36.694	NaN	5883.4	30	0	697.18	0.106	+			26800	LVSGVLYYK	9	75	521.3021862782562	1040.5898196233122	2	521.3028564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LVSGVLYYK_	ENSG00000131269|ENST00000373394|ABCB7;nc|ENSG00000131269|O75027-2|ABCB7;nc|ENSG00000131269|O75027-3|ABCB7	71.87747018426188	0.13267044672804276	4				NaN	NaN	0	NaN	10551	3755	14305
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14309	36.696	NaN	8718.7	30	0	1030.6	0.106	+			19035	IYATEAHVF	9	70	525.7657157824575	1049.516878631715	2	525.7665405273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IYATEAHVF_	ENSG00000058804|ENST00000371429|NDC1;nc|ENSG00000058804|Q9BTX1-2|NDC1;nc|ENSG00000058804|Q9BTX1-3|NDC1;nc|ENSG00000058804|Q9BTX1-4|NDC1;nc|ENSG00000058804|Q9BTX1-5|NDC1;nc|ENSG00000058804|Q9BTX1-6|NDC1	106.41520541750704	0.03265588207292361	4				NaN	NaN	0	NaN	10552	3755	14305
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14310	36.697	NaN	6165.6	30	0	419.39	0.106	+			50903	YGFQEKEAF	9	70	559.7601615225093	1117.5057701118185	2	559.7611083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YGFQEKEAF_	ENSG00000163481|ENST00000295704|RNF25;RNF25|p.G250Efs*29|4|0.29|ENSG00000163481|chr2:218664791-218664791|C/-|frameshift_variant	106.68306549817024	0.032382560583716295	4				NaN	NaN	0	NaN	10553	3755	14305
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14311	36.699	NaN	8260.4	30	0	4315.4	0.106				-1	 	0	60	418.91221067413403	1253.714802622602	3	418.91265869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10554	3755	14305
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14312	36.701	NaN	5699.2	30	0	621.77	0.035			+	16767	HMTSLKEY	8	78	512.7416564179001	1023.4687599026003	2	513.2482299804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_HM(Oxidation (M))TSLKEY_	REV__ENSG00000147202|ENST00000324765|DIAPH2;REV__nc|ENSG00000147202|O60879-2|DIAPH2;REV__nc|ENSG00000147202|O60879-3|DIAPH2	50.0245360154114	0.5941082100236891	4				NaN	NaN	0	NaN	10555	3755	14305
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14322	36.723	NaN	18695	30	0	2993.9	0.214	+			14298	GSWASLVQK	9	87	488.2664103766544	974.5182678201088	2	488.2663879394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSWASLVQK_	BRD4|p.P1210L|1|0.19|ENSG00000141867|chr19:15239212-15239212|G/A|missense_variant;ENSG00000141867|ENST00000679869|BRD4	93.1432384553994	0.056003526918089595	4				NaN	NaN	0	NaN	10562	3758	14321
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14323	36.726	NaN	4592	30	0	584.58	0.106	+			800	AEFRTNKTL	9	81	540.2937343817487	1078.5729158302972	2	540.7935180664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEFRTNKTL_	ENSG00000156802|ENST00000287394|ATAD2;ENST00000517666.5_1_8:124333376-124408650:-|nuORF;ENST00000521496.5_1_8:124357024-124408597:-|nuORF	66.42927471994793	0.16001998865088202	4				NaN	NaN	0	NaN	10563	3758	14321
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14324	36.728	NaN	3545.2	30	0	232.38	0.106	+			16736	HLLTERNEV	9	69	555.7972133388838	NaN	0	555.7980346679688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HLLTERNEV_	nc|ENSG00000114529|Q5BVD1-3|TTMP	53.351449002276354	0.18359631779194618	4				NaN	NaN	0	NaN	10564	3758	14321
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14325	36.73	NaN	1792.9	30	0	266.61	0.106	+			8270	EAGTTRTF	8	59	441.71952875902707	881.4245045848542	2	441.7203369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EAGTTRTF_	ENSG00000138162|ENST00000369005|TACC2;nc|ENSG00000138162|O95359-3|TACC2;TACC2|p.E1974Rfs*22|1|0.37|ENSG00000138162|chr10:122195118-122195119|-/C|frameshift_variant;TACC2|p.V2229Cfs*22|1|0.07|ENSG00000138162|chr10:122211108-122211109|-/A|frameshift_variant	42.396135135203025	0.6414440140393314	4				NaN	NaN	0	NaN	10565	3758	14321
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14326	36.732	NaN	3025.5	30	0	232.95	0.106			+	27456	MLMASRWQL	9	67	576.2880828332826	NaN	0	576.2885131835938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_M(Oxidation (M))LMASRWQL_	REV__ENSG00000114656|ENST00000645291|CFAP92	55.50420428727701	0.16876052142120426	4				NaN	NaN	0	NaN	10566	3758	14321
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14327	36.734	NaN	3787.3	30	0	310.83	0.033	+			27189	MDVSVPKV	8	67	437.7380884956392	873.4616240580784	2	437.7388916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MDVSVPKV_	AHNAK|p.K2311Rfs*11|1|0.33|ENSG00000124942|chr11:62527487-62527487|G/-|frameshift_variant;AHNAK|p.K2311Rfs*11|1|0.33|ENSG00000124942|chr11:62527487-62527487|G/-|frameshift_variant;AHNAK|p.K2311Rfs*11|1|0.33|ENSG00000124942|chr11:62527487-62527487|G/-|frameshift_variant;AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;AHNAK|p.L2124Ifs*37|1|0.04|ENSG00000124942|chr11:62528048-62528049|-/ATGCCTGATA|frameshift_variant;AHNAK|p.L2124Ifs*37|1|0.04|ENSG00000124942|chr11:62528048-62528049|-/ATGCCTGATA|frameshift_variant;AHNAK|p.S1888Qfs*8|1|0.11|ENSG00000124942|chr11:62528755-62528756|-/G|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK;ENSG00000124942|ENST00000378024|AHNAK;ENSG00000124942|ENST00000378024|AHNAK	56.72105179125745	0.5342425954139568	4				NaN	NaN	0	NaN	10567	3758	14321
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14328	36.734	NaN	2472.4	30	0	197.23	0.142	+			25610	LQMERRARP	9	67	586.8185838041469	1171.6226146750937	2	586.8209838867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_LQM(Oxidation (M))ERRARP_	ENST00000262585.6_3_8:142205376-142205649:+|nuORF	56.72105179125745	0.24094814563026265	4				NaN	NaN	0	NaN	10568	3758	14321
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14336	36.754	NaN	23149	30	0	2179.5	0.214	+			19164	IYRELEKN	8	81	532.7895177815883	1063.5644826299765	2	532.7908935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IYRELEKN_	tr|U7SV17|U7SV17_FUSNUFAD-dependentproteinC-terminaldomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01092PE=4SV=1	79.45101966838831	0.3281480470254892	4				NaN	NaN	0	NaN	10573	3761	14335
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14337	36.758	NaN	7682.8	30	0	1847.8	0.106	+			19116	IYLEKLKTI	9	60	374.23692262765604	1119.6889384831682	3	374.2373352050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IYLEKLKTI_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	51.19269402634007	0.2889735674168909	4				NaN	NaN	0	NaN	10574	3761	14335
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14338	36.76	NaN	7039.9	30	0	1583.1	0.106				-1	 	0	79	571.3372380876364	1140.6599232420726	2	571.3384399414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10575	3761	14335
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14339	36.761	NaN	20244	30	0	2386.1	0.106				-1	 	0	86	525.7943981665086	1049.574243399817	2	525.7955322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10576	3761	14335
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14340	36.763	NaN	3639.9	30	0	279.89	0.106	+			24588	LGPSAAQEL	9	57	443.2369926658674	884.4594323985348	2	443.23687744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LGPSAAQEL_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	85.16082228582465	0.07850854922700509	4				NaN	NaN	0	NaN	10577	3761	14335
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14341	36.765	NaN	7047.8	30	0	613.56	0.106	+			19117	IYLEKLKTI	9	79	560.8518405482974	1119.6891281633948	2	560.8526000976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IYLEKLKTI_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	85.86182877749512	0.07653218437724067	4				NaN	NaN	0	NaN	10578	3761	14335
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14342	36.767	NaN	10437	30	0	1396.1	0.036	+			19102	IYKDSSTFL	9	73	537.2790823298355	1072.543611726471	2	537.2796630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IYKDSSTFL_	ENSG00000145388|ENST00000388822|METTL14	158.07458414430337	0.004987072822166904	4				NaN	NaN	0	NaN	10579	3761	14335
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14348	36.781	NaN	11859	30	0	2012.4	0.214	+			14491	GTCLFVAVK	9	70	497.7722829480178	993.5300129628356	2	497.7728271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GTC(Carbamidomethyl (C))LFVAVK_	ENSG00000198752|ENST00000361246|CDC42BPB	134.81075121484326	0.012914550297035062	4				NaN	NaN	0	NaN	10582	3764	14347
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14349	36.785	NaN	8774.2	30	0	1616.6	0.106	+			24722	LHNSYTDVM	9	70	540.2442749800924	1078.4739970269848	2	540.2452392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LHNSYTDVM_	ENSG00000167515|ENST00000696289|TRAPPC2L;ENST00000563514.1_1_16:88926246-88927364:+|nuORF;ENST00000565205.5_1_16:88925858-88927364:+|nuORF;nc|ENSG00000167515|Q9UL33|TRAPPC2L	27.882242232435846	0.5426732730940306	4				NaN	NaN	0	NaN	10583	3764	14347
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14350	36.787	NaN	3939.4	30	0	784.85	0.106				-1	 	0	62	452.7290031602478	903.4434533872957	2	452.7292785644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10584	3764	14347
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14351	36.789	NaN	2682.8	30	0	663.32	0.106			+	2800	ARSSPLLP	8	43	420.749808891665	839.48506485013	2	420.7502746582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ARSSPLLP_	REV__ENSG00000114933|ENST00000403263|INO80D;REV__INO80D|p.V883Gfs*2|1|0.31|ENSG00000114933|chr2:206004804-206004804|A/-|frameshift_variant	30.503639358989545	0.7238069182250283	4				NaN	NaN	0	NaN	10585	3764	14347
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14352	36.791	NaN	2928	30	0	901.58	0.106	+			10285	ETMMFTFHK	9	59	586.26656213691	1170.51857134062	2	586.2677001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ETMMFTFHK_	ENSG00000197747|ENST00000368811|S100A10;ENST00000478348.1_1_1:151957748-151958706:-|nuORF;ENST00000478574.5_1_1:151956596-151958706:-|nuORF	31.634271133179894	0.507608568980346	4				NaN	NaN	0	NaN	10586	3764	14347
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14353	36.792	NaN	3582.6	30	0	325.65	0.106	+			32585	QYDTSSKTHS	10	69	577.2612281792588	1152.5079034253174	2	577.2633666992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QYDTSSKTHS_	AFF1|p.K607Nfs*39|1|0.33|ENSG00000172493|chr4:87114670-87114670|A/-|frameshift_variant;AFF1|p.R820Tfs*98|1|0.12|ENSG00000172493|chr4:87125045-87125048|AGAA/-|frameshift_variant;ENSG00000172493|ENST00000395146|AFF1;nc|ENSG00000172493|P51825-3|AFF1;nc|ENSG00000172493|P51825|AFF1	45.02220120713402	0.5028680121232791	4				NaN	NaN	0	NaN	10587	3764	14347
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14354	36.794	NaN	3251.6	30	0	877.67	0.035			+	31375	QKFGLSKLS	9	39	336.53426418257783	NaN	0	336.53399658203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QKFGLSKLS_	REV__WDR11|p.N1189S|1|0.06|ENSG00000120008|chr10:120908604-120908604|A/G|missense_variant	17.364965105453717	0.37820932774828947	4				NaN	NaN	0	NaN	10588	3764	14347
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14363	36.814	NaN	12592	30	0	5739.1	0.214	+			23573	LALLPGQHE	9	71	489.2737290217528	976.5329051103056	2	489.27264404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LALLPGQHE_	ENST00000577198.5_1_17:26603697-26633156:-|nuORF	47.91560031466742	0.327412564698279	4				NaN	NaN	0	NaN	10594	3767	14362
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14364	36.818	NaN	5050.5	30	0	473.92	0.106				-1	 	0	68	511.7423639782933	1021.4701750233867	2	511.7427978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10595	3767	14362
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14365	36.82	NaN	4179.4	30	0	334.27	0.106	+			23425	LACGVAKVL	9	65	437.26429579398206	872.5140386547641	2	437.26458740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LACGVAKVL_	ENSG00000265972|ENST00000582401|TXNIP	106.41520541750704	0.03265588207292361	4				NaN	NaN	0	NaN	10596	3767	14362
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14366	36.821	NaN	3279.4	30	0	302.21	0.106	+			42734	TDISARIL	8	61	444.7610387242585	887.5075245153171	2	444.76080322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TDISARIL_	ENSG00000167986|ENST00000301764|DDB1;ENST00000414411.3_1_11:61081295-61081943:-|nuORF	66.42927471994793	0.4381325844043345	4				NaN	NaN	0	NaN	10597	3767	14362
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14367	36.823	NaN	1873.2	30	0	209.3	0.106			+	37875	SNTLYLKAALN	11	45	403.2263502112838	NaN	0	403.2263488769531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SNTLYLKAALN_	REV__ENSG00000103723|ENST00000535359|AP3B2;REV__ENST00000543938.5_1_15:83328314-83349061:-|nuORF;REV__nc|ENSG00000103723|Q13367-3|AP3B2;REV__nc|ENSG00000103723|Q13367|AP3B2	33.03940026070387	0.41817340257782254	4				NaN	NaN	0	NaN	10598	3767	14362
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14368	36.825	NaN	2229.2	30	0	169.16	0.106			+	6598	AYNHCLEEFT	10	71	613.7603080421214	1225.5060631510428	2	613.7606811523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AYNHCLEEFT_	REV__ENSG00000133454|ENST00000335473|MYO18B;REV__MYO18B|p.I1502Ffs*3|1|0.09|ENSG00000133454|chr22:25891370-25891370|A/-|frameshift_variant;REV__MYO18B|p.K1556Sfs*19|1|0.16|ENSG00000133454|chr22:25895276-25895276|A/-|frameshift_variant;REV__nc|ENSG00000133454|Q8IUG5-2|MYO18B;REV__nc|ENSG00000133454|Q8IUG5-3|MYO18B	32.81241826257853	0.6118718159329168	4				NaN	NaN	0	NaN	10599	3767	14362
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14369	36.827	NaN	3371.9	30	0	243.55	0.035	+			27699	MPVRDVRL	8	63	493.28511968572184	984.5556864382437	2	493.2857666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MPVRDVRL_	ENST00000277541.6_1_9:139389036-139389225:-|nuORF	37.15910966729921	0.6739408393984688	4				NaN	NaN	0	NaN	10600	3767	14362
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14377	36.845	NaN	15578	30	0	2056.6	0.214	+			12947	GESSLRNFTM	10	81	571.2683921521792	1140.5222313711583	2	571.269287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GESSLRNFTM_	ENSG00000153147|ENST00000283131|SMARCA5;ENST00000515531.1_1_4:144464789-144465131:+|nuORF	77.53327743719008	0.21577387331637743	4				NaN	NaN	0	NaN	10605	3770	14376
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14378	36.849	NaN	7524.1	30	0	750.09	0.106	+			36443	SEVELMKV	8	71	467.7488117617694	933.4830705903388	2	467.7489318847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEVELMKV_	ENSG00000115758|ENST00000234111|ODC1	134.81075121484326	0.23895231276701365	4				NaN	NaN	0	NaN	10606	3770	14376
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14379	36.851	NaN	7747.4	30	0	1295.1	0.106	+			37368	SLFLEDEV	8	69	476.23717765881497	950.45980238443	2	476.2372741699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLFLEDEV_	tr|U7T0U1|U7T0U1_FUSNUDNA-directedRNApolymerasesubunitbeta'OS=FusobacteriumnucleatumCTI-5OX=1316586GN=rpoCPE=3SV=1	33.51558372728122	0.7005509609380386	4				NaN	NaN	0	NaN	10607	3770	14376
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14380	36.852	NaN	2339.8	30	0	217.7	0.106	+			12762	GELILKSAM	9	59	481.27222795402844	960.5299029748569	2	481.2725524902344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GELILKSAM_	ENSG00000104880|ENST00000668164|ARHGEF18;nc|ENSG00000104880|Q6ZSZ5-1|ARHGEF18;nc|ENSG00000104880|Q6ZSZ5-2|ARHGEF18;nc|ENSG00000104880|Q6ZSZ5-5|ARHGEF18;nc|ENSG00000104880|Q6ZSZ5-6|ARHGEF18	53.08895987439943	0.27122541748218487	4				NaN	NaN	0	NaN	10608	3770	14376
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14381	36.854	NaN	4649.2	30	0	828.06	0.106			+	29754	PHSPLVGL	8	53	410.2392055472321	818.4638581612642	2	410.2393798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PHSPLVGL_	REV__ACTL6B|p.G51Rfs*61|1|0.32|ENSG00000077080|chr7:100655539-100655540|-/C|frameshift_variant	35.200714571348534	0.6875396545722289	4				NaN	NaN	0	NaN	10609	3770	14376
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14382	36.856	NaN	5254.6	30	0	468.4	0.106			+	-1	LKKRCTPC	8	75	503.27116936196853	1004.5277857907371	2	503.2721252441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_LKKRC(Carbamidomethyl (C))TPC_	REV__ENSG00000121481|ENST00000367510|RNF2;REV__ENSG00000204227|ENST00000374656|RING1;REV__nc|ENSG00000204227|Q06587-2|RING1;REV__RING1|p.G217Efs*68|1|0.23|ENSG00000204227|chr6:33211348-33211348|G/-|frameshift_variant;REV__RING1|p.G322Afs*54|1|0.31|ENSG00000204227|chr6:33211844-33211844|G/-|frameshift_variant;REV__RING1|p.P247Qfs*38|2|0.55|ENSG00000204227|chr6:33211437-33211437|C/-|frameshift_variant;REV__RNF2|p.S310Lfs*12|1|0.35|ENSG00000121481|chr1:185100214-185100214|T/-|frameshift_variant	47.91560031466742	0.6071945918984287	4				NaN	NaN	0	NaN	10610	3770	14376
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14383	36.858	NaN	1721.3	30	0	174.62	0.034	+			18582	ISPPPTANL	9	61	455.2550530210327	908.4955531088655	2	455.2556457519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ISPPPTANL_	ENSG00000169398|ENST00000696786|PTK2;nc|ENSG00000169398|Q05397-2|PTK2;nc|ENSG00000169398|Q05397-5|PTK2;nc|ENSG00000169398|Q05397-6|PTK2;nc|ENSG00000169398|Q05397-7|PTK2;nc|ENSG00000169398|Q05397|PTK2	37.81151784470057	0.4459294069877048	4				NaN	NaN	0	NaN	10611	3770	14376
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14391	36.876	NaN	20201	30	0	2572.2	0.214	+			45535	TYITSVSRL	9	91	520.2921409724481	1038.5697290116962	2	520.292724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TYITSVSRL_	ENSG00000164823|ENST00000451899|OSGIN2;nc|ENSG00000164823|Q9Y236|OSGIN2	106.68306549817024	0.032382560583716295	4				NaN	NaN	0	NaN	10616	3773	14390
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14392	36.879	NaN	9116.8	30	0	1053.3	0.106	+			42123	SYLNSVQRL	9	75	540.2937343817487	1078.5729158302972	2	540.2962036132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SYLNSVQRL_	ENSG00000136243|ENST00000258742|NUP42;nc|ENSG00000136243|O15504-2|NUP42	56.43379154798735	0.2433427591689151	4				NaN	NaN	0	NaN	10617	3773	14390
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14393	36.881	NaN	5433	30	0	586.17	0.106			+	9489	EKSIQGAPSM	10	76	524.2604024205298	1046.5062519078595	2	524.2611694335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EKSIQGAPSM_	REV__ENSG00000173230|ENST00000614479|GOLGB1;REV__GOLGB1|p.D2495Tfs*21|1|0.22|ENSG00000173230|chr3:121691867-121691867|T/-|frameshift_variant;REV__GOLGB1|p.E1174Gfs*19|1|0.24|ENSG00000173230|chr3:121696989-121696990|-/T|frameshift_variant;REV__GOLGB1|p.E1375Sfs*20|1|0.04|ENSG00000173230|chr3:121696385-121696386|-/TGGA|frameshift_variant;REV__GOLGB1|p.E1375Vfs*20|1|0.02|ENSG00000173230|chr3:121696386-121696387|-/AACTTAGTGAGAAAGAAGCAGCTCTCACT|frameshift_variant;REV__GOLGB1|p.K2450Rfs*27|1|0.37|ENSG00000173230|chr3:121692000-121692000|T/-|frameshift_variant;REV__GOLGB1|p.Q2186Sfs*19|1|0.31|ENSG00000173230|chr3:121693952-121693952|G/-|frameshift_variant;REV__GOLGB1|p.S1501Vfs*38|1|0.2|ENSG00000173230|chr3:121696007-121696007|T/-|frameshift_variant;REV__nc|ENSG00000173230|Q14789-2|GOLGB1;REV__nc|ENSG00000173230|Q14789-3|GOLGB1;REV__nc|ENSG00000173230|Q14789-4|GOLGB1;REV__nc|ENSG00000173230|Q14789|GOLGB1	56.43379154798735	0.3982744522255666	4				NaN	NaN	0	NaN	10618	3773	14390
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14394	36.883	NaN	3774.3	30	0	375.59	0.106	+			47471	VQALKYENF	9	82	556.2917162205251	1110.5688795078502	2	556.2922973632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VQALKYENF_	ENSG00000078142|ENST00000262039|PIK3C3;PIK3C3|p.F623Lfs*43|2|0.38|ENSG00000078142|chr18:42037716-42037716|T/-|frameshift_variant	124.08010499294276	0.018729767491916592	4				NaN	NaN	0	NaN	10619	3773	14390
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14395	36.885	NaN	4587.2	30	0	779.92	0.106			+	6928	CNIINEVISKG	11	51	416.2198180329565	1245.6376246990694	3	416.22015380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_C(Carbamidomethyl (C))NIINEVISKG_	REV__ENSG00000174130|ENST00000508254|TLR6	50.79123845855914	0.4102859592092987	4				NaN	NaN	0	NaN	10620	3773	14390
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14396	36.887	NaN	1865.9	30	0	154.04	0.106	+			14449	GTAVVGVVL	9	48	407.75517631241496	NaN	0	407.7549133300781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTAVVGVVL_	ENSG00000196411|ENST00000358173|EPHB4;ENST00000487222.5_1_7:100401085-100421908:-|nuORF	33.51558372728122	0.30835390848773375	4				NaN	NaN	0	NaN	10621	3773	14390
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14397	36.888	NaN	2501.5	30	0	230.84	0.036	+			6623	AYRLLQHW	8	65	543.7946448001273	1085.5747366670546	2	543.3258056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AYRLLQHW_	ENST00000376281.8_1_9:86593159-86595479:-|nuORF	26.79610172149135	0.7524337208463756	4				NaN	NaN	0	NaN	10622	3773	14390
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14406	36.909	NaN	7231.2	30	0	2641	0.214	+			49910	VYTTTVHW	8	72	503.75275010611256	1005.4909472790251	2	503.75372314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYTTTVHW_	ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1670Tfs*23|1|0.29|ENSG00000174231|chr17:1659487-1659487|C/-|frameshift_variant	40.5726180659479	0.6527593143185008	4				NaN	NaN	0	NaN	10628	3776	14405
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14407	36.912	NaN	6206.9	30	0	593.62	0.106	+			19083	IYIGGQEHF	9	68	532.263595414828	1062.512637896456	2	532.2648315429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IYIGGQEHF_	ENSG00000158125|ENST00000379416|XDH;XDH|p.Q919Rfs*10|1|0.37|ENSG00000158125|chr2:31350104-31350104|C/-|frameshift_variant	37.15910966729921	0.4535818937225704	4				NaN	NaN	0	NaN	10629	3776	14405
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14408	36.914	NaN	6496	30	0	2383	0.106	+			17511	IDKDVIVAL	9	70	493.2994239401294	984.5842949470588	2	493.3001403808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IDKDVIVAL_	ENSG00000197233|ENST00000335302|OR1J2	42.86426827375447	0.38666266728046506	4				NaN	NaN	0	NaN	10630	3776	14405
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14409	36.916	NaN	3865.1	30	0	392.69	0.106			+	-1	MMLGTTAAVMT	11	66	381.5135569262952	1141.5188413790856	3	381.5140380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_MMLGTTAAVM(Oxidation (M))T_	REV__COL1A1|p.G1181Afs*58|1|0.37|ENSG00000108821|chr17:50186914-50186914|G/-|frameshift_variant	37.50817390946774	0.5920388381045607	4				NaN	NaN	0	NaN	10631	3776	14405
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14410	36.918	NaN	3901.8	30	0	264.91	0.106			+	32769	RARCRPAVE	9	79	529.2860958688016	1056.557638804403	2	529.7857666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RARCRPAVE_	REV__ENST00000334116.7_2_19:37064077-37064176:-|nuORF	44.116797842482775	0.37197099687881774	4				NaN	NaN	0	NaN	10632	3776	14405
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14411	36.919	NaN	1109.3	30	0	95.842	0.036				-1	 	0	39	355.19005807014616	1062.5483448106386	3	355.1903991699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10633	3776	14405
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14412	36.92	NaN	1501.1	30	0	135.18	0.141	+			24577	LGPATAAV	8	44	350.2066750103161	NaN	0	350.20660400390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LGPATAAV_	ENST00000379081.5_1_9:34405939-34458505:-|nuORF;ENST00000379089.5_1_9:34405939-34458505:-|nuORF	28.2542754592877	1.7418937515398478	4				NaN	NaN	0	NaN	10634	3776	14405
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14421	36.943	NaN	15790	30	0	1815.2	0.214			+	17178	HTQKYAEVY	9	81	569.7807813411291	1137.5470097490581	2	569.7818603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HTQKYAEVY_	REV__ENSG00000196235|ENST00000432763|SUPT5H;REV__nc|ENSG00000196235|O00267-2|SUPT5H;REV__SUPT5H|p.P800Hfs*154|1|0.21|ENSG00000196235|chr19:39473425-39473425|C/-|frameshift_variant	87.75429964447693	0.0711966946989736	4				NaN	NaN	0	NaN	10640	3779	14420
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14422	36.947	NaN	4631.4	30	0	330	0.106				-1	NVVLVMAYGS	10	71	534.7727866411717	1067.5310203491433	2	534.7732543945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_NVVLVM(Oxidation (M))AYGS_	ENSG00000143612|ENST00000368521|C1orf43;nc|nan|Q9BWL3-2|C1orf43;nc|nan|Q9BWL3-3|C1orf43;nc|nan|Q9BWL3-4|C1orf43;nc|nan|Q9BWL3-5|C1orf43	49.44154591367651	0.46214596422418036	4				NaN	NaN	0	NaN	10641	3779	14420
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14423	36.949	NaN	4352.8	30	0	447.66	0.106	+			23347	KYTKIFNDF	9	74	588.3078203118656	1174.6010876905311	2	588.3082275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KYTKIFNDF_	ENSG00000015171|ENST00000381604|ZMYND11;nc|ENSG00000015171|Q15326-2|ZMYND11;nc|ENSG00000015171|Q15326-3|ZMYND11;nc|ENSG00000015171|Q15326-4|ZMYND11;nc|ENSG00000015171|Q15326-5|ZMYND11;nc|ENSG00000015171|Q15326-6|ZMYND11;ZMYND11|p.L498Afs*3|1|0.3|ENSG00000015171|chr10:248592-248602|GAGAAGCTCTG/-|frameshift_variant	66.9202029811203	0.15592758990009112	4				NaN	NaN	0	NaN	10642	3779	14420
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14424	36.951	NaN	4745	30	0	322.73	0.106	+			31198	QGQRPRPVAL	10	78	561.3313060341831	1120.648059135166	2	561.3323974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QGQRPRPVAL_	ENST00000511685.5_2_4:183721546-183721825:+|nuORF	35.15202426646627	0.5927656479315102	4				NaN	NaN	0	NaN	10643	3779	14420
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14425	36.953	NaN	1934.6	30	0	155.59	0.106				-1	 	0	55	460.77553815441996	919.53652337564	2	460.776123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10644	3779	14420
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14426	36.954	NaN	1986.1	30	0	155.28	0.106				-1	NECGKTFYL	9	68	566.2595186754753	1130.5044844177505	2	566.2611694335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_NEC(Carbamidomethyl (C))GKTFYL_	ENSG00000164631|ENST00000405858|ZNF12;nc|ENSG00000164631|P17014-3|ZNF12;nc|ENSG00000164631|P17014-4|ZNF12;nc|ENSG00000164631|P17014-5|ZNF12;ZNF12|p.F670Ifs*15|1|0.56|ENSG00000164631|chr7:6690934-6690935|-/T|frameshift_variant	46.45678178249821	0.34452392205506005	4				NaN	NaN	0	NaN	10645	3779	14420
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14427	36.956	NaN	3357.6	30	0	274.69	0.036			+	28312	NEFNNKDLI	9	74	553.7762481990638	1105.5379434649276	2	553.7770385742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NEFNNKDLI_	REV__tr|U7SIY9|U7SIY9_FUSNUDelta-aminolevulinicaciddehydrataseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02281PE=3SV=1	77.31757898189308	0.1091473830098891	4				NaN	NaN	0	NaN	10646	3779	14420
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14435	36.974	NaN	10887	30	0	2652.1	0.214	+			41685	SVSDIIVVAK	10	78	515.810231650776	1029.605910368352	2	515.810791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSDIIVVAK_	ENSG00000006042|ENST00000579849|TMEM98;ENST00000583120.1_1_17:31258522-31263466:+|nuORF	117.7056744995986	0.030570130731382417	4				NaN	NaN	0	NaN	10651	3782	14434
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14436	36.978	NaN	10610	30	0	1759.2	0.106	+			1953	AIVAYGLYK	9	73	499.28897979582666	996.5634066584533	2	499.2890319824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AIVAYGLYK_	ENSG00000181061|ENST00000321331|HIGD1A;ENST00000470543.1_1_3:42826765-42845976:-|nuORF;nc|ENSG00000181061|Q9Y241-2|HIGD1A	110.33723246496265	0.028653888678955353	4				NaN	NaN	0	NaN	10652	3782	14434
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14437	36.98	NaN	7535.8	30	0	2021.4	0.106	+			46498	VETVYTHVL	9	71	530.7868352664914	1059.5591175997827	2	530.7874145507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VETVYTHVL_	ENSG00000163902|ENST00000296255|RPN1	143.10689835833298	0.00902249513149409	4				NaN	NaN	0	NaN	10653	3782	14434
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14438	36.982	NaN	5899.4	30	0	361.36	0.106	+			47364	VPFHSDLGY	9	79	517.7512169125326	1033.4878808918652	2	517.7508544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VPFHSDLGY_	ENSG00000100997|ENST00000339157|ABHD12;nc|ENSG00000100997|Q8N2K0-2|ABHD12;nc|ENSG00000100997|Q8N2K0-3|ABHD12	73.97473282117947	0.12360187025703594	4				NaN	NaN	0	NaN	10654	3782	14434
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14439	36.983	NaN	4021.6	30	0	664.61	0.106	+			9360	EISQASHYF	9	66	541.2505383732347	1080.4865238132693	2	541.2509155273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EISQASHYF_	ENSG00000100385|ENST00000216223|IL2RB;IL2RB|p.P489Lfs*43|1|0.23|ENSG00000100385|chr22:37128286-37128286|G/-|frameshift_variant	56.72105179125745	0.24094814563026265	4				NaN	NaN	0	NaN	10655	3782	14434
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14440	36.985	NaN	3470.8	30	0	699.6	0.106				-1	TALKGICRAQ	10	51	373.2094262372505	1116.6064493119516	3	373.2097473144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_TALKGIC(Carbamidomethyl (C))RAQ_	ENSG00000142871|ENST00000451137|CCN1	21.68575002086885	0.7027366847906487	4				NaN	NaN	0	NaN	10656	3782	14434
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14441	36.987	NaN	4080.3	30	0	318.8	0.036				-1	FEPNCLRR	8	70	546.2724328446035	1090.5303127560069	2	546.2734985351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_FEPNC(Carbamidomethyl (C))LRR_	ENSG00000110841|ENST00000228425|PPFIBP1;nc|ENSG00000110841|Q86W92-3|PPFIBP1;nc|ENSG00000110841|Q86W92-4|PPFIBP1;nc|ENSG00000110841|Q86W92|PPFIBP1	39.252832667884924	0.6609488554722044	4				NaN	NaN	0	NaN	10657	3782	14434
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14450	37.009	NaN	9535.4	30	0	673.62	0.214			+	50151	WKDLMMKV	8	80	525.7768957247195	1049.5392385162388	2	525.7771606445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WKDLMMKV_	REV__ENSG00000186377|ENST00000371901|CYP4X1;REV__nc|ENSG00000186377|Q8N118-2|CYP4X1;REV__nc|ENSG00000186377|Q8N118-3|CYP4X1	56.72105179125745	0.5342425954139568	4				NaN	NaN	0	NaN	10663	3785	14449
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14451	37.012	NaN	3051.3	30	0	450.9	0.106	+			25386	LPHVTASF	8	63	436.236894555293	870.4592361773861	2	436.2372741699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LPHVTASF_	ENSG00000198788|ENST00000675028|MUC2;nc|ENSG00000198788|Q02817|MUC2	83.28718786952967	0.2977916691876266	4				NaN	NaN	0	NaN	10664	3785	14449
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14452	37.014	NaN	8231.6	30	0	1167.1	0.106	+			26580	LTTQDSQIV	9	82	502.7665544093839	1003.5185558855678	2	502.7668762207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LTTQDSQIV_	nc|ENSG00000255221|Q5XLA6|CARD17P	113.41158876095287	0.025516849225023126	4				NaN	NaN	0	NaN	10665	3785	14449
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14453	37.016	NaN	3844.2	30	0	435.42	0.106			+	-1	QCTEESHKF	9	75	583.2521646622391	1164.4897763912782	2	583.2528686523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_QC(Carbamidomethyl (C))TEESHKF_	REV__ENSG00000004139|ENST00000585482|SARM1;REV__ENST00000379061.8_1_17:26708312-26722930:+|nuORF;REV__nc|ENSG00000004139|Q6SZW1-2|SARM1	31.529811441608018	0.5085848003137583	4				NaN	NaN	0	NaN	10666	3785	14449
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14454	37.018	NaN	6406.3	30	0	674.86	0.106				-1	ADIKIHGM	8	66	450.73263432841026	NaN	0	450.7331848144531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_ADIKIHGM(Oxidation (M))_	ENSG00000129003|ENST00000644861|VPS13C;nc|ENSG00000129003|Q709C8-2|VPS13C;nc|ENSG00000129003|Q709C8-3|VPS13C;nc|ENSG00000129003|Q709C8-4|VPS13C;VPS13C|p.E2463Nfs*18|1|0.25|ENSG00000129003|chr15:61920157-61920157|C/-|frameshift_variant;VPS13C|p.N3163Sfs*6|1|0.05|ENSG00000129003|chr15:61882732-61882733|-/TTATCATCAC|frameshift_variant;VPS13C|p.P3597Lfs*3|1|0.26|ENSG00000129003|chr15:61868732-61868732|G/-|frameshift_variant	42.396135135203025	1.7418937515398478	4				NaN	NaN	0	NaN	10667	3785	14449
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14455	37.02	NaN	1828.4	30	0	168.7	0.038			+	22638	KTVKPSGWSQE	11	52	623.8258886955116	1245.637224457823	2	623.8261108398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KTVKPSGWSQE_	REV__ENSG00000144381|ENST00000388968|HSPD1;REV__ENST00000388967.3_1_3:36809324-36810203:-|nuORF;REV__ENST00000461097.1_1_2:198361816-198363572:-|nuORF;REV__ENST00000476746.5_1_2:198360008-198364584:-|nuORF;REV__HSPD1|p.G441Vfs*14|1|0.04|ENSG00000144381|chr2:197488385-197488385|C/-|frameshift_variant;REV__nc|ENSG00000144381|P10809-2|HSPD1	25.125986553469783	0.7262400895305658	4				NaN	NaN	0	NaN	10668	3785	14449
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14456	37.02	NaN	2938.8	30	0	260.88	0.141	+			1601	AGLLAAASLV	10	64	443.27331607453544	884.5320792158709	2	443.2728576660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AGLLAAASLV_	ENSG00000133328|ENST00000255695|PLAAT2	47.91560031466742	0.4762067885998563	4				NaN	NaN	0	NaN	10669	3785	14449
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14464	37.04	NaN	8762	30	0	934.71	0.214			+	47825	VSKQEELL	8	66	473.26567990415424	944.5168068751085	2	473.26629638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSKQEELL_	REV__ENSG00000188878|ENST00000636174|FBF1;REV__ENST00000585990.5_1_17:73910371-73916335:-|nuORF;REV__ENST00000593076.1_1_17:73910704-73911112:-|nuORF;REV__nc|ENSG00000188878|Q8TES7-2|FBF1;REV__nc|ENSG00000188878|Q8TES7-5|FBF1;REV__nc|ENSG00000188878|Q8TES7|FBF1	62.107414245175825	0.4809183816468817	4				NaN	NaN	0	NaN	10674	3788	14463
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14465	37.044	NaN	6981.1	30	0	840.66	0.106			+	46573	VFLQPAPQ	8	64	450.2522890054392	898.4900250776784	2	450.2529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VFLQPAPQ_	REV__ENST00000472524.1_1_11:64122844-64124563:+|nuORF;REV__ENST00000479965.5_1_11:64120415-64123189:+|nuORF	50.0245360154114	0.5941082100236891	4				NaN	NaN	0	NaN	10675	3788	14463
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14466	37.046	NaN	5923	30	0	535.96	0.106			+	525	ACTSLAKCLM	10	71	549.2589204249895	1096.5032879167788	2	549.2606201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_ACTSLAKC(Carbamidomethyl (C))LM_	REV__ENSG00000280236|ENST00000642051|OR12D2	64.20726635412375	0.3275756395432415	4				NaN	NaN	0	NaN	10676	3788	14463
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14467	37.048	NaN	6437.5	30	0	587.47	0.106	+			21666	KQALKYFNL	9	83	562.8261085581022	1123.6376641830043	2	562.8275756835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KQALKYFNL_	ENSG00000071537|ENST00000336735|SEL1L	71.29570347882199	0.13518600952103718	4				NaN	NaN	0	NaN	10677	3788	14463
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14468	37.05	NaN	6959.2	30	0	807.02	0.106			+	20771	KHRLGVRSS	9	81	520.3098627076381	1038.6051724820761	2	520.3118896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KHRLGVRSS_	REV__ENSG00000141429|ENST00000269195|GALNT1	42.396135135203025	0.392153681582562	4				NaN	NaN	0	NaN	10678	3788	14463
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14469	37.051	NaN	3706.9	30	0	450.41	0.106	+			28517	NIDMGHIL	8	61	456.73357797351207	911.4526030138242	2	456.7338562011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NIDMGHIL_	tr|U7STY8|U7STY8_FUSNUAAAdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01035PE=4SV=1	50.0245360154114	0.5941082100236891	4				NaN	NaN	0	NaN	10679	3788	14463
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14470	37.053	NaN	3796.1	30	0	324.39	0.036	+			42097	SYILQKSTF	9	71	543.7946448001273	1085.5747366670546	2	543.7958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SYILQKSTF_	BRCA2|p.E3316Rfs*11|1|0.3|ENSG00000139618|chr13:32398452-32398453|-/A|frameshift_variant;BRCA2|p.K1691Nfs*15|1|0.11|ENSG00000139618|chr13:32339422-32339422|A/-|frameshift_variant;BRCA2|p.N1544Tfs*24|1|0.22|ENSG00000139618|chr13:32338982-32338982|A/-|frameshift_variant;BRCA2|p.N1642Mfs*2|1|0.08|ENSG00000139618|chr13:32339277-32339277|A/-|frameshift_variant;BRCA2|p.N1784Tfs*7|1|0.4|ENSG00000139618|chr13:32339700-32339700|A/-|frameshift_variant;BRCA2|p.T2515Nfs*24|1|0.35|ENSG00000139618|chr13:32356530-32356531|-/A|frameshift_variant;BRCA2|p.T2685Hfs*9|1|0.05|ENSG00000139618|chr13:32363251-32363251|A/-|frameshift_variant;ENSG00000139618|ENST00000380152|BRCA2	68.84614121027924	0.14577793175421136	4				NaN	NaN	0	NaN	10680	3788	14463
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14477	37.07	NaN	9774.2	30	0	1630.8	0.214	+			16006	HAQDYVLTY	9	81	555.2662921817894	1108.5180314303786	2	555.2672119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HAQDYVLTY_	ENSG00000134755|ENST00000280904|DSC2	69.6276240434122	0.14239879520340665	4				NaN	NaN	0	NaN	10684	3791	14476
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14478	37.073	NaN	5318.6	30	0	698.27	0.106			+	7432	DFAVNLFRL	9	69	547.8038616464087	1093.5931703596173	2	547.8052978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DFAVNLFRL_	REV__ENSG00000156787|ENST00000287380|TBC1D31;REV__ENST00000518099.5_1_8:124085009-124113262:+|nuORF;REV__nc|ENSG00000156787|Q96DN5-2|TBC1D31;REV__nc|ENSG00000156787|Q96DN5-3|TBC1D31;REV__TBC1D31|p.F193Lfs*30|1|0.08|ENSG00000156787|chr8:123093646-123093646|T/-|frameshift_variant	55.50420428727701	0.2510918378945873	4				NaN	NaN	0	NaN	10685	3791	14476
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14479	37.075	NaN	2521.1	30	0	288.01	0.106	+			46001	VAVDSTGTYM	10	67	522.2386570366735	1042.462761140147	2	522.2390747070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VAVDSTGTYM_	ENSG00000227057|ENST00000374617|WDR46;ENST00000489905.1_1_6:33248421-33255161:-|nuORF	56.72105179125745	0.3956618550748046	4				NaN	NaN	0	NaN	10686	3791	14476
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14480	37.077	NaN	3119.4	30	0	470.38	0.106	+			16957	HPPRHCRSL	9	69	551.7912350183552	NaN	0	551.7904663085938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HPPRHCRSL_	ENST00000433688.2_2_11:63531028-63531832:-|nuORF	60.97194046774394	0.14517358171632622	4				NaN	NaN	0	NaN	10687	3791	14476
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14481	37.079	NaN	4564.5	30	0	366.93	0.106				-1	 	0	81	464.28380406182043	926.5530551904409	2	464.2840881347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10688	3791	14476
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14482	37.08	NaN	5008.8	30	0	353.89	0.106	+			32831	RCKNQISSMG	10	67	590.7813084831483	NaN	0	590.7794799804688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_RC(Carbamidomethyl (C))KNQISSMG_	ENST00000422732.2_10:47098417-47099340:-|nuORF	54.776311868738084	0.27540594196716844	4				NaN	NaN	0	NaN	10689	3791	14476
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14483	37.082	NaN	5351.3	30	0	600.04	0.035	+			27015	LYRMPGMF	8	76	507.74769126599796	1013.4808295987959	2	507.74749755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LYRMPGMF_	FOXS1|p.T323M|1|0.4|ENSG00000179772|chr20:31844575-31844575|G/A|missense_variant	47.91560031466742	0.6071945918984287	4				NaN	NaN	0	NaN	10690	3791	14476
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14492	37.102	NaN	6001.3	30	0	1260	0.214				-1	 	0	73	469.786432058965	937.55831118473	2	469.7867736816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10696	3794	14491
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14493	37.106	NaN	9329.9	30	0	3759.3	0.106			+	-1	FNDAYAMMVI	10	70	603.7614539838665	1205.508355034533	2	603.7620849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Oxidation (M)	_FNDAYAM(Oxidation (M))M(Oxidation (M))VI_	REV__ENSG00000151812|ENST00000556826|SLC35F4;REV__nc|ENSG00000151812|A4IF30-2|SLC35F4;REV__nc|ENSG00000151812|A4IF30|SLC35F4	34.172542307311794	0.6007644933930345	4				NaN	NaN	0	NaN	10697	3794	14491
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14494	37.108	NaN	3740.2	30	0	406.72	0.106	+			21211	KLFHGSLEEL	10	72	586.8185838041469	1171.6226146750937	2	586.8192138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KLFHGSLEEL_	ARHGAP9|p.H688Pfs*20|1|0.35|ENSG00000123329|chr12:57472650-57472651|-/G|frameshift_variant;ENSG00000123329|ENST00000393791|ARHGAP9;ENST00000552420.5_1_12:57870791-57873587:-|nuORF;nc|ENSG00000123329|Q9BRR9-5|ARHGAP9;nc|ENSG00000123329|Q9BRR9|ARHGAP9	58.2462437865262	0.38179041844353556	4				NaN	NaN	0	NaN	10698	3794	14491
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14495	37.11	NaN	4322.5	30	0	392.5	0.106	+			12565	GEGPDVHMTL	10	71	528.2449558430957	1054.4753587529913	2	528.747314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEGPDVHMTL_	AHNAK|p.I657Nfs*25|1|0.36|ENSG00000124942|chr11:62532447-62532448|-/T|frameshift_variant;AHNAK|p.K2311Rfs*11|1|0.33|ENSG00000124942|chr11:62527487-62527487|G/-|frameshift_variant;AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;AHNAK|p.L2124Ifs*37|1|0.04|ENSG00000124942|chr11:62528048-62528049|-/ATGCCTGATA|frameshift_variant;AHNAK|p.S1888Qfs*8|1|0.11|ENSG00000124942|chr11:62528755-62528756|-/G|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK	42.86426827375447	0.522752283233888	4				NaN	NaN	0	NaN	10699	3794	14491
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14496	37.111	NaN	1972.4	30	0	251.13	0.106	+			23885	LDIAGLAAV	9	55	421.75229287046926	841.4900328077385	2	421.7526550292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LDIAGLAAV_	ENSG00000048707|ENST00000620676|VPS13D;nc|ENSG00000048707|Q5THJ4-2|VPS13D;VPS13D|p.K3964Nfs*34|1|0.09|ENSG00000048707|chr1:12403831-12403831|A/-|frameshift_variant	47.91560031466742	0.327412564698279	4				NaN	NaN	0	NaN	10700	3794	14491
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14497	37.113	NaN	1459.8	30	0	244.1	0.041			+	-1	YATKQMMPNCF	11	63	711.7945988237792	1421.5746447143583	2	711.7964477539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),2 Oxidation (M)	_YATKQM(Oxidation (M))M(Oxidation (M))PNC(Carbamidomethyl (C))F_	REV__ADCY10|p.N1597Tfs*4|1|0.07|ENSG00000143199|chr1:167809721-167809721|T/-|frameshift_variant;REV__ADCY10|p.P1022Sfs*2|1|0.28|ENSG00000143199|chr1:167837262-167837263|-/A|frameshift_variant;REV__ENSG00000143199|ENST00000367851|ADCY10;REV__nc|ENSG00000143199|Q96PN6-2|ADCY10;REV__nc|ENSG00000143199|Q96PN6-4|ADCY10	23.52269567125451	0.7430573033454468	4				NaN	NaN	0	NaN	10701	3794	14491
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14498	37.114	NaN	3069.2	30	0	210.69	0.142	+			27066	MAFVNSVAK	9	65	491.75709628057456	981.4996396279491	2	491.7579345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_M(Oxidation (M))AFVNSVAK_	ENSG00000011007|ENST00000613537|ELOA;nc|ENSG00000011007|Q14241-1|ELOA	54.776311868738084	0.25715957988447635	4				NaN	NaN	0	NaN	10702	3794	14491
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14505	37.132	NaN	15966	30	0	1449.2	0.214	+			18436	ISCVNLAFK	9	89	526.2842666023727	NaN	0	526.2838745117188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_ISC(Carbamidomethyl (C))VNLAFK_	ENST00000227758.6_3_11:102219989-102220022:+|nuORF	154.1183686248401	0.005714644813043012	4				NaN	NaN	0	NaN	10706	3797	14504
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14506	37.136	NaN	9341.5	30	0	978.37	0.106	+			42462	TAMFIASKY	9	80	516.2645967224161	1030.514640511632	2	516.2652587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAMFIASKY_	ENSG00000134057|ENST00000256442|CCNB1;nc|ENSG00000134057|P14635-2|CCNB1	76.16968421966216	0.11411088698345859	4				NaN	NaN	0	NaN	10707	3797	14504
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14507	37.138	NaN	9507.3	30	0	540.16	0.106				-1	EMARALRGPG	10	87	537.2790823298355	1072.543611726471	2	538.2941284179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_EM(Oxidation (M))ARALRGPG_	ENSG00000112659|ENST00000252050|CUL9;ENST00000515773.5_1_6:43152048-43164205:+|nuORF;nc|ENSG00000112659|Q8IWT3-3|CUL9	51.33545320467046	0.4446945571623749	4				NaN	NaN	0	NaN	10708	3797	14504
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14508	37.14	NaN	10618	30	0	1018.1	0.106	+			42925	TEIGRVIQV	9	85	507.7998049392334	1013.5850569452668	2	507.8009338378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TEIGRVIQV_	ENSG00000111275|ENST00000261733|ALDH2;ENST00000548536.1_1_12:112213467-112247376:+|nuORF;nc|ENSG00000111275|P05091-2|ALDH2	51.19269402634007	0.2889735674168909	4				NaN	NaN	0	NaN	10709	3797	14504
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14509	37.141	NaN	4419.9	30	0	404.84	0.106	+			51601	YYQHIVTTL	9	76	569.2995574712975	1136.5845620093949	2	569.3007202148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YYQHIVTTL_	ENSG00000116005|ENST00000433351|PCYOX1;nc|ENSG00000116005|Q9UHG3-2|PCYOX1	62.107414245175825	0.1960472003779324	4				NaN	NaN	0	NaN	10710	3797	14504
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14510	37.143	NaN	3279.4	30	0	705.14	0.106			+	-1	STRLPVAGL	9	65	478.28163430515013	NaN	0	478.28173828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))STRLPVAGL_	REV__ENST00000367302.5_2_1:201789190-201789238:+|nuORF	56.72105179125745	0.16330365735109603	4				NaN	NaN	0	NaN	10711	3797	14504
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14511	37.145	NaN	3614.8	30	0	778.28	0.035			+	-1	KRMGIMKK	8	40	336.53426418257783	NaN	0	336.53424072265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_KRMGIM(Oxidation (M))KK_	REV__CCAR1|p.E816Kfs*75|1|0.25|ENSG00000060339|chr10:68771347-68771347|A/-|frameshift_variant	20.94693142431847	1.7418937515398478	4				NaN	NaN	0	NaN	10712	3797	14504
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14524	37.172	NaN	22344	30	0	2921.1	0.214				-1	 	0	76	439.75784408278554	877.5011352323711	2	439.7580871582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10722	3800	14523
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14525	37.176	NaN	14155	30	0	1351.9	0.106				-1	 	0	86	511.7423639782933	1021.4701750233867	2	511.7429504394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10723	3800	14523
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14526	37.178	NaN	16307	30	0	2744.9	0.106	+			42209	TAAGLMHTF	9	78	474.7332100632393	947.4518671932786	2	474.73370361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TAAGLMHTF_	ENSG00000086475|ENST00000327347|SEPHS1;ENSG00000179918|ENST00000478753|SEPHS2;ENST00000446112.1_1_X:72989760-72990255:+|nuORF;nc|ENSG00000086475|P49903-3|SEPHS1;nc|ENSG00000086475|P49903-4|SEPHS1	161.89823264540465	0.004149850016316161	4				NaN	NaN	0	NaN	10724	3800	14523
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14527	37.18	NaN	8780.7	30	0	1538.7	0.106	+			23230	KYGSVTVW	8	69	470.250516164238	938.486479395276	2	470.24981689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KYGSVTVW_	ENSG00000149923|ENST00000279387|PPP4C;ENST00000566749.5_1_16:30094185-30096380:+|nuORF;ENST00000567040.5_1_16:30087698-30094972:+|nuORF	56.72105179125745	0.5342425954139568	4				NaN	NaN	0	NaN	10725	3800	14523
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14528	37.181	NaN	4355.2	30	0	374.3	0.106	+			7739	DMARVCNTTTD	11	74	613.7603080421214	1225.5060631510428	2	613.7608642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DMARVCNTTTD_	ENSG00000123104|ENST00000381340|ITPR2;ITPR2|p.K1802Sfs*13|2|0.65|ENSG00000123104|chr12:26487217-26487217|T/-|frameshift_variant;ITPR2|p.R1837Gfs*7|1|0.09|ENSG00000123104|chr12:26487113-26487113|T/-|frameshift_variant;ITPR2|p.R1837Kfs*4|1|0.24|ENSG00000123104|chr12:26487112-26487113|-/T|frameshift_variant	44.377184641726394	0.49804979881800077	4				NaN	NaN	0	NaN	10726	3800	14523
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14529	37.183	NaN	5102.5	30	0	1978.7	0.106			+	25568	LQAPPNPQL	9	71	489.2737290217528	976.5329051103056	2	489.27392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LQAPPNPQL_	REV__ENSG00000135596|ENST00000358807|MICAL1;REV__ENST00000456101.6_1_6:109773431-109775944:-|nuORF;REV__MICAL1|p.T754Qfs*150|1|0.53|ENSG00000135596|chr6:109446741-109446741|C/-|frameshift_variant;REV__nc|ENSG00000135596|Q8TDZ2-2|MICAL1;REV__nc|ENSG00000135596|Q8TDZ2-4|MICAL1	40.77816245573522	0.41113185337114944	4				NaN	NaN	0	NaN	10727	3800	14523
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14530	37.185	NaN	5397.5	30	0	565.14	0.033	+			1081	AELALKTL	8	58	429.7678358511035	857.521118769007	2	429.7681884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AELALKTL_	ENSG00000136813|ENST00000684092|ECPAS;nc|ENSG00000136813|Q5VYK3|ECPAS	101.25262130126117	0.2499877059228457	4				NaN	NaN	0	NaN	10728	3800	14523
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14540	37.207	NaN	8095.8	30	0	702.47	0.214	+			23912	LDLKATQAL	9	71	486.7895349859131	971.5645170386263	2	486.7899169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LDLKATQAL_	ENSG00000161960|ENST00000293831|EIF4A1;ENST00000428062.1_1_13:37513331-37513424:-|nuORF;ENST00000550578.1_1_12:53547103-53547616:+|nuORF;ENST00000578324.5_1_17:7477602-7481249:+|nuORF;ENST00000578754.5_2_17:7476163-7480421:+|nuORF;ENST00000580461.5_1_17:7476163-7478717:+|nuORF;ENST00000581621.1_1_17:7476159-7481249:+|nuORF;ENST00000582848.5_1_17:7476159-7480015:+|nuORF;ENST00000584712.5_1_17:7476159-7478717:+|nuORF;ENST00000584901.5_1_17:7476159-7480015:+|nuORF;nc|ENSG00000161960|P60842-2|EIF4A1	90.60085204095205	0.06317133949006545	4				NaN	NaN	0	NaN	10735	3803	14539
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14541	37.21	NaN	7303.9	30	0	1165.7	0.106			+	-1	RHNISCYQI	9	81	595.7908721402163	1189.5671913472324	2	595.7919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_RHNISC(Carbamidomethyl (C))YQI_	REV__TPCN2|p.R60C|1|0.26|ENSG00000162341|chr11:69054724-69054724|C/T|missense_variant	32.81241826257853	0.4965981579233955	4				NaN	NaN	0	NaN	10736	3803	14539
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14542	37.212	NaN	5344.8	30	0	380.39	0.106	+			49681	VYKETCISF	9	77	573.777504456308	1145.5404559794158	2	573.7791748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_VYKETC(Carbamidomethyl (C))ISF_	ENSG00000127324|ENST00000247829|TSPAN8;ENST00000552128.2_1_12:71519116-71532942:-|nuORF	93.5975768576971	0.05472259948179787	4				NaN	NaN	0	NaN	10737	3803	14539
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14543	37.214	NaN	9357.8	30	0	959.64	0.106	+			24687	LHALTELVD	9	73	505.7796788336876	NaN	0	505.77923583984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LHALTELVD_	CEP72|p.R176Efs*23|1|0.42|ENSG00000112877|chr5:633778-633778|C/-|frameshift_variant;ENSG00000112877|ENST00000264935|CEP72;nc|ENSG00000112877|Q9P209-2|CEP72	53.351449002276354	0.18359631779194618	4				NaN	NaN	0	NaN	10738	3803	14539
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14544	37.216	NaN	7721.4	30	0	999.62	0.106	+			28249	NDIVISKL	8	76	451.27038758993746	900.5262222466749	2	451.2711181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NDIVISKL_	ENSG00000113141|ENST00000417647|IK	96.0336014099291	0.25920480862606965	4				NaN	NaN	0	NaN	10739	3803	14539
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14545	37.218	NaN	4039.2	30	0	1121	0.037			+	-1	MQSLGGPAQQM	11	78	590.2599480009178	1178.5053430686355	2	590.2608642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Oxidation (M)	_M(Oxidation (M))QSLGGPAQQM(Oxidation (M))_	REV__CACNA1B|p.P2044Lfs*125|1|0.41|ENSG00000148408|chr9:138120261-138120261|C/-|frameshift_variant;REV__ENSG00000148408|ENST00000371372|CACNA1B;REV__nc|ENSG00000148408|Q00975-2|CACNA1B	40.05817265558897	0.5571470695993369	4				NaN	NaN	0	NaN	10740	3803	14539
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14546	37.218	NaN	6611.4	30	0	998.69	0.141	+			47448	VPVDLQHQF	9	81	541.7843187759157	1081.5540846186314	2	541.7854614257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VPVDLQHQF_	ENSG00000132326|ENST00000254657|PER2;PER2|p.P894Hfs*125|1|0.41|ENSG00000132326|chr2:238253342-238253342|G/-|frameshift_variant	104.0567914643314	0.03506238181059741	4				NaN	NaN	0	NaN	10741	3803	14539
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14558	37.245	NaN	198270	30	0	41630	0.162				-1	 	0	87	524.8102664283163	1047.6059799234324	2	524.8109130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10750	3806	14557
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14559	37.248	NaN	19008	30	0	2581	0.106			+	9732	EMYKILSQ	8	80	506.263520462811	1010.512487992422	2	506.2641906738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EMYKILSQ_	REV__ENSG00000106560|ENST00000223293|GIMAP2	74.25504064058377	0.37144338840759816	4				NaN	NaN	0	NaN	10751	3806	14557
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14560	37.25	NaN	8423.1	30	0	898.43	0.106				-1	 	0	69	501.30235400553426	1000.5901550778685	2	501.3029479980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10752	3806	14557
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14561	37.252	NaN	5391.3	30	0	577.49	0.106				-1	 	0	61	421.77600966576125	841.5374663983225	2	421.77630615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10753	3806	14557
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14562	37.254	NaN	6649.2	30	0	487.34	0.106	+			42810	TEAQANQISL	10	79	537.7752930161237	1073.5360330990472	2	537.7754516601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TEAQANQISL_	ENSG00000110442|ENST00000263401|COMMD9;nc|ENSG00000110442|Q9P000-2|COMMD9	90.14881205920913	0.1302219035121668	4				NaN	NaN	0	NaN	10754	3806	14557
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14563	37.255	NaN	9952.9	30	0	959.43	0.106	+			27671	MPTKTIEVL	9	86	516.293282636146	1030.572012339092	2	516.2942504882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MPTKTIEVL_	ENSG00000175581|ENST00000310614|MRPL48;ENST00000544140.5_1_11:73555872-73571072:+|nuORF;nc|ENSG00000175581|Q96GC5-3|MRPL48	65.46538089061403	0.16805504838372562	4				NaN	NaN	0	NaN	10755	3806	14557
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14564	37.257	NaN	5716.1	30	0	1005.1	0.035	+			28065	NAATIKDVF	9	72	489.76626435778866	977.5179757823773	2	489.76666259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NAATIKDVF_	ENSG00000005700|ENST00000306270|IBTK;ENST00000369751.2_1_6:82901346-82950269:-|nuORF;ENST00000505222.5_1_6:82901346-82950269:-|nuORF;IBTK|p.F642Vfs*29|1|0.2|ENSG00000005700|chr6:82214507-82214508|-/C|frameshift_variant;IBTK|p.K1213Sfs*50|1|0.13|ENSG00000005700|chr6:82181966-82181966|T/-|frameshift_variant;IBTK|p.M1160*|1|0.13|ENSG00000005700|chr6:82191170-82191170|T/-|frameshift_variant;IBTK|p.Q590Sfs*9|1|0.41|ENSG00000005700|chr6:82214663-82214664|-/A|frameshift_variant;IBTK|p.Y96Mfs*11|1|0.09|ENSG00000005700|chr6:82240201-82240201|A/-|frameshift_variant;nc|ENSG00000005700|Q9P2D0-2|IBTK	46.45678178249821	0.34452392205506005	4				NaN	NaN	0	NaN	10756	3806	14557
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14573	37.277	NaN	9224.8	30	0	2654.6	0.214			+	28716	NNKKLLDPY	9	79	552.8039599018288	1103.5933668704574	2	552.806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NNKKLLDPY_	REV__ENSG00000158055|ENST00000361548|GRHL3;REV__nc|ENSG00000158055|Q8TE85-2|GRHL3;REV__nc|ENSG00000158055|Q8TE85-3|GRHL3;REV__nc|ENSG00000158055|Q8TE85-4|GRHL3;REV__nc|ENSG00000158055|Q8TE85|GRHL3	36.446750945000026	0.4619375763483977	4				NaN	NaN	0	NaN	10762	3809	14572
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14574	37.281	NaN	5622.1	30	0	508.02	0.106				-1	 	0	72	479.7379307591273	957.4613085850547	2	479.7384338378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10763	3809	14572
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14575	37.283	NaN	7021.7	30	0	1469.4	0.106				-1	 	0	75	466.2759871656243	930.5374213980487	2	466.2762756347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10764	3809	14572
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14576	37.284	NaN	5841	30	0	2873.7	0.106			+	1821	AIGGLYRL	8	50	431.7602001513899	861.5058473695798	2	431.7604675292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AIGGLYRL_	REV__ENSG00000077616|ENST00000534061|NAALAD2;REV__NAALAD2|p.K562Nfs*33|1|0.35|ENSG00000077616|chr11:90177940-90177940|A/-|frameshift_variant;REV__NAALAD2|p.Q563Tfs*14|1|0.14|ENSG00000077616|chr11:90177939-90177940|-/A|frameshift_variant	35.200714571348534	0.6875396545722289	4				NaN	NaN	0	NaN	10765	3809	14572
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14577	37.286	NaN	3497.8	30	0	609.6	0.106			+	6841	CILALRNGQ	9	76	494.2754906534521	986.5364283737042	2	494.2766418457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_CILALRNGQ_	REV__ENST00000594950.5_1_19:58865471-58865783:+|nuORF	37.15910966729921	0.4535818937225704	4				NaN	NaN	0	NaN	10766	3809	14572
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14578	37.288	NaN	2943.9	30	0	220	0.036			+	-1	GLALFAMLIF	10	75	556.3127175090794	1110.6108820849588	2	556.3103637695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_GLALFAM(Oxidation (M))LIF_	REV__tr|U7T308|U7T308_FUSNUCation/H+exchangerdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00349PE=4SV=1	44.53106598305862	0.5073935772121767	4				NaN	NaN	0	NaN	10767	3809	14572
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14579	37.289	NaN	2659.1	30	0	170.04	0.141	+			10985	FEFKAHVEG	9	63	532.263595414828	1062.512637896456	2	532.2639770507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FEFKAHVEG_	ENSG00000101596|ENST00000320876|SMCHD1;nc|ENSG00000101596|A6NHR9-2|SMCHD1;SMCHD1|p.D1006Kfs*40|1|0.32|ENSG00000101596|chr18:2729370-2729371|-/AA|frameshift_variant;SMCHD1|p.D1006Tfs*39|2|0.32|ENSG00000101596|chr18:2729371-2729371|A/-|frameshift_variant;SMCHD1|p.G727Rfs*21|1|0.3|ENSG00000101596|chr18:2707832-2707833|-/A|frameshift_variant;SMCHD1|p.K680Nfs*3|2|0.26|ENSG00000101596|chr18:2706442-2706442|A/-|frameshift_variant;SMCHD1|p.M779Wfs*12|1|0.38|ENSG00000101596|chr18:2718226-2718226|A/-|frameshift_variant	42.396135135203025	0.392153681582562	4				NaN	NaN	0	NaN	10768	3809	14572
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14588	37.31	NaN	12228	30	0	1840.3	0.214				-1	 	0	75	454.26541027412185	906.5162676150437	2	454.2657470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10774	3812	14587
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14589	37.314	NaN	18713	30	0	4999.9	0.106				-1	 	0	82	550.7751525834766	1099.535752233753	2	550.7762451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10775	3812	14587
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14590	37.316	NaN	4015.3	30	0	236.07	0.106				-1	 	0	61	460.77553815441996	919.53652337564	2	460.7760009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10776	3812	14587
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14591	37.318	NaN	2805.4	30	0	224.46	0.106	+			30640	QASVISCYI	9	66	520.7592125359691	1039.5038721387382	2	521.2623901367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_QASVISC(Carbamidomethyl (C))YI_	ENST00000448553.5_1_15:44087200-44089477:-|nuORF;nc|ENSG00000184716|A6NH21-2|SERINC4;nc|ENSG00000184716|A6NH21|SERINC4	60.97194046774394	0.20551255781574032	4				NaN	NaN	0	NaN	10777	3812	14587
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14592	37.319	NaN	3891.6	30	0	323.69	0.106			+	33465	RIRRNERF	8	80	573.8344017037554	1145.6542504743106	2	573.835693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RIRRNERF_	REV__ENSG00000121289|ENST00000305768|CEP89;REV__nc|ENSG00000121289|Q96ST8-2|CEP89	54.776311868738084	0.5534952410049249	4				NaN	NaN	0	NaN	10778	3812	14587
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14593	37.321	NaN	4103.6	30	0	453.08	0.037	+			35923	SEFYKHIVL	9	81	568.3086014895255	1134.6026500458509	2	568.3112182617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SEFYKHIVL_	ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2	54.776311868738084	0.25715957988447635	4				NaN	NaN	0	NaN	10779	3812	14587
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14594	37.322	NaN	3256.6	30	0	639.72	0.146			+	3787	ATAGALMARQK	11	50	373.2094262372505	1116.6064493119516	3	373.2102355957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATAGALMARQK_	REV__ENSG00000113522|ENST00000378823|RAD50;REV__nc|ENSG00000113522|Q92878-2|RAD50;REV__nc|ENSG00000113522|Q92878-3|RAD50;REV__RAD50|p.K722Gfs*5|1|0.35|ENSG00000113522|chr5:132595760-132595761|AA/-|frameshift_variant;REV__RAD50|p.N934Ifs*6|1|0.26|ENSG00000113522|chr5:132608690-132608690|A/-|frameshift_variant	24.231819034082204	0.7356191775841856	4				NaN	NaN	0	NaN	10780	3812	14587
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14602	37.342	NaN	2397.4	30	0	326.76	0.214	+			28711	NNIVVILL	8	63	449.2914911048605	896.568429276521	2	449.291748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NNIVVILL_	ENSG00000001461|ENST00000374399|NIPAL3;nc|ENSG00000001461|Q6P499-2|NIPAL3;nc|ENSG00000001461|Q6P499-3|NIPAL3	50.0245360154114	0.5941082100236891	4				NaN	NaN	0	NaN	10785	3815	14601
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14603	37.345	NaN	3697.9	30	0	635.75	0.106			+	34261	RTHIKCHQI	9	66	379.20949499595395	1134.6066555880618	3	379.5439147949219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RTHIKCHQI_	REV__ENST00000426361.6_2_8:146202527-146225127:-|nuORF;REV__ENST00000427606.2_1_8:146202527-146219907:-|nuORF	32.81241826257853	0.4965981579233955	4				NaN	NaN	0	NaN	10786	3815	14601
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14604	37.347	NaN	2561.4	30	0	201.87	0.106	+			2607	AQGQSASLLAE	11	66	537.7752930161237	1073.5360330990472	2	537.7771606445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AQGQSASLLAE_	ENSG00000124920|ENST00000278836|MYRF	49.536043120802724	0.4274608637932522	4				NaN	NaN	0	NaN	10787	3815	14601
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14605	37.349	NaN	2875.2	30	0	287.03	0.106			+	23567	LALHPDTLL	9	63	496.79228702101733	991.5700211088347	2	496.7922668457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LALHPDTLL_	REV__ENSG00000010932|ENST00000617670|FMO1;REV__nc|ENSG00000010932|Q01740-2|FMO1	40.5726180659479	0.4135428067754104	4				NaN	NaN	0	NaN	10788	3815	14601
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14606	37.351	NaN	2366.3	30	0	361.59	0.106	+			9701	EMGKSCIKM	9	64	558.2493875290542	NaN	0	558.2490844726562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C),2 Oxidation (M)	_EM(Oxidation (M))GKSC(Carbamidomethyl (C))IKM(Oxidation (M))_	ZFYVE16|p.I1258M|1|0.36|ENSG00000039319|chr5:80456544-80456544|A/G|missense_variant	45.9519527083369	0.2345902329052062	4				NaN	NaN	0	NaN	10789	3815	14601
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14607	37.353	NaN	2932.2	30	0	278.85	0.037	+			29889	PLLNGLDYTV	10	62	368.8693701152937	1103.5862809460812	3	368.8697509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PLLNGLDYTV_	ENSG00000121454|ENST00000263726|LHX4;LHX4|p.A324T|3|0.26|ENSG00000121454|chr1:180274376-180274376|G/A|missense_variant	30.503639358989545	0.6307262373768582	4				NaN	NaN	0	NaN	10790	3815	14601
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14608	37.353	NaN	2693.5	30	0	249.03	0.142	+			9626	ELQDWDGQSP	10	70	587.7538724240491	1173.493191914898	2	587.754638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ELQDWDGQSP_	ENSG00000188641|ENST00000370192|DPYD	35.15202426646627	0.5927656479315102	4				NaN	NaN	0	NaN	10791	3815	14601
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14613	37.37	NaN	13255	30	0	2945.6	0.214	+			11844	FTAIREASL	9	81	504.27847220090933	1006.5423914686187	2	504.27801513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FTAIREASL_	CDK14|p.E269Sfs*2|1|0.3|ENSG00000058091|chr7:90917699-90917699|G/-|frameshift_variant;CDK14|p.L228Cfs*6|1|0.16|ENSG00000058091|chr7:90899327-90899327|G/-|frameshift_variant;CDK15|p.C410Wfs*2|1|0.09|ENSG00000138395|chr2:201890832-201890833|-/G|frameshift_variant;ENSG00000058091|ENST00000380050|CDK14;ENSG00000138395|ENST00000652192|CDK15;ENST00000451080.5_1_2:202672326-202741280:+|nuORF;ENST00000488419.1_1_2:202671387-202725552:+|nuORF;nc|ENSG00000058091|O94921-2|CDK14;nc|ENSG00000058091|O94921-3|CDK14;nc|ENSG00000138395|Q96Q40-3|CDK15;nc|ENSG00000138395|Q96Q40-4|CDK15;nc|ENSG00000138395|Q96Q40-5|CDK15;nc|ENSG00000138395|Q96Q40-6|CDK15	72.87924865735499	0.12833875048249987	4				NaN	NaN	0	NaN	10793	3818	14612
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14614	37.373	NaN	6847.2	30	0	1661.3	0.106	+			2092	ALFDGVVSK	9	64	468.26300366397885	934.5114543947577	2	468.2630920410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ALFDGVVSK_	ENSG00000151806|ENST00000281543|GUF1;ENST00000506793.5_1_4:44680541-44700695:+|nuORF;GUF1|p.K645Sfs*2|5|0.23|ENSG00000151806|chr4:44698598-44698598|A/-|frameshift_variant	67.49366992349736	0.1516260258713357	4				NaN	NaN	0	NaN	10794	3818	14612
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14615	37.375	NaN	5957.1	30	0	845.1	0.106	+			10621	EYNKSWQTF	9	75	601.7771404533921	1201.5397279735841	2	601.7776489257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EYNKSWQTF_	ENSG00000198440|ENST00000333201|ZNF583	158.07458414430337	0.004987072822166904	4				NaN	NaN	0	NaN	10795	3818	14612
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14616	37.377	NaN	2937	30	0	283.1	0.106			+	-1	SILSCVVF	8	57	462.74805512610556	923.4815573190111	2	462.7444152832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_SILSC(Carbamidomethyl (C))VVF_	REV__tr|U7T4V1|U7T4V1_FUSNUCPA1familymonovalentcation:H+antiporterOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00189PE=4SV=1	52.29916861842294	0.578018602984656	4				NaN	NaN	0	NaN	10796	3818	14612
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14617	37.379	NaN	3653.7	30	0	590.24	0.106				-1	MLDQCPHPAF	10	71	392.1719039008833	1173.49388230285	3	392.50653076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_M(Oxidation (M))LDQCPHPAF_	ENSG00000197653|ENST00000673944|DNAH10;ENST00000492261.5_1_12:124409716-124414381:+|nuORF;ENST00000545078.1_1_12:124411346-124414067:+|nuORF;nc|ENSG00000197653|Q8IVF4|DNAH10	32.75053402867276	0.6123771875927935	4				NaN	NaN	0	NaN	10797	3818	14612
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14618	37.381	NaN	4646.2	30	0	2237.5	0.106				-1	LLMVCGVLIL	10	45	382.8924395743105	1145.6554893231316	3	382.8923645019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),Oxidation (M)	_LLM(Oxidation (M))VC(Carbamidomethyl (C))GVLIL_	ENSG00000062524|ENST00000263800|LTK;ENST00000563518.5_1_15:41799676-41805922:-|nuORF;LTK|p.D681Tfs*76|1|0.2|ENSG00000062524|chr15:41504852-41504852|C/-|frameshift_variant;nc|ENSG00000062524|P29376-4|LTK;nc|ENSG00000062524|P29376-5|LTK	39.252832667884924	0.5560298534376815	4				NaN	NaN	0	NaN	10798	3818	14612
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14619	37.382	NaN	5521.6	30	0	1171.3	0.037	+			9624	ELPSPLITFT	10	65	373.2094262372505	1116.6064493119516	3	373.5437927246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ELPSPLITFT_	ENSG00000275004|ENST00000626650|ZNF280B	21.9598887501803	0.7004979571547932	4				NaN	NaN	0	NaN	10799	3818	14612
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14624	37.397	NaN	5312.9	30	0	975.16	0.214	+			12725	GEKTISVVL	9	62	473.28387486324243	944.5531967932849	2	473.28424072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEKTISVVL_	ENSG00000073050|ENST00000262887|XRCC1;ENST00000594511.1_1_19:44078923-44079610:-|nuORF;ENST00000595789.5_1_19:44056953-44079610:-|nuORF	69.6276240434122	0.14239879520340665	4				NaN	NaN	0	NaN	10801	3821	14623
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14625	37.4	NaN	3938.5	30	0	611.16	0.106	+			23895	LDKATVLL	8	66	436.77572274560947	871.536892558019	2	436.7758483886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LDKATVLL_	ENSG00000150593|ENST00000280154|PDCD4;ENST00000489049.5_1_10:112647518-112650449:+|nuORF;nc|ENSG00000150593|Q53EL6-2|PDCD4	134.81075121484326	0.23895231276701365	4				NaN	NaN	0	NaN	10802	3821	14623
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14626	37.402	NaN	5324.3	30	0	504.54	0.106			+	10343	ETTPILLPR	9	65	520.3098627076381	1038.6051724820761	2	520.3099975585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ETTPILLPR_	REV__ENST00000322048.11_1_16:4847335-4847443:-|nuORF	40.77816245573522	0.41113185337114944	4				NaN	NaN	0	NaN	10803	3821	14623
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14627	37.404	NaN	6908.6	30	0	1351.4	0.106			+	26366	LTCLTELIK	9	74	545.8114195465874	1089.6082861599748	2	545.8128662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_LTC(Carbamidomethyl (C))LTELIK_	REV__ENSG00000158863|ENST00000289921|FHIP2B;REV__ENST00000488968.1_1_8:21953801-21954290:+|nuORF;REV__ENST00000498344.2_1_8:21946698-21954290:+|nuORF	69.6276240434122	0.14239879520340665	4				NaN	NaN	0	NaN	10804	3821	14623
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14628	37.406	NaN	5839	30	0	496.38	0.106	+			49226	VVNGRVLEL	9	83	499.8027399962056	997.5909270592113	2	499.8028259277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVNGRVLEL_	ENSG00000135597|ENST00000450536|REPS1;ENST00000531675.1_1_6:139272213-139308858:-|nuORF;nc|ENSG00000135597|Q96D71-2|REPS1;nc|ENSG00000135597|Q96D71-3|REPS1;nc|ENSG00000135597|Q96D71-4|REPS1;REPS1|p.F519Yfs*3|1|0.21|ENSG00000135597|chr6:138917599-138917600|AA/-|frameshift_variant;REPS1|p.P550Lfs*14|1|0.22|ENSG00000135597|chr6:138915929-138915929|G/-|frameshift_variant	66.42927471994793	0.16001998865088202	4				NaN	NaN	0	NaN	10805	3821	14623
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14629	37.408	NaN	4072.4	30	0	375.72	0.106			+	5465	AVAAAKVSSL	10	74	458.77608288107655	915.5376128289531	2	458.7764892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AVAAAKVSSL_	REV__ENSG00000215474|ENST00000425639|SKOR2	56.72105179125745	0.3956618550748046	4				NaN	NaN	0	NaN	10806	3821	14623
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14630	37.409	NaN	5197.4	30	0	494.18	0.037				-1	KMKGMNMPGR	10	73	591.2839863566247	1180.5534197800494	2	591.2848510742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Oxidation (M)	_KM(Oxidation (M))KGMNM(Oxidation (M))PGR_	ENST00000394718.4_1_14:64934934-64935021:+|nuORF	32.81241826257853	0.6118718159329168	4				NaN	NaN	0	NaN	10807	3821	14623
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14642	37.435	NaN	6982.4	30	0	856.76	0.214	+			42572	TASQDKILF	9	79	511.7786379916391	1021.5427230500782	2	511.7793884277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TASQDKILF_	ENSG00000168404|ENST00000308807|MLKL;nc|ENSG00000168404|Q8NB16-2|MLKL	53.08895987439943	0.27122541748218487	4				NaN	NaN	0	NaN	10816	3824	14641
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14643	37.439	NaN	5369.5	30	0	536.6	0.106			+	23868	LDEVRKLEG	9	68	529.7950907928383	1057.5756286524766	2	529.7959594726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LDEVRKLEG_	REV__ENSG00000224470|ENST00000427980|ATXN1L	44.377184641726394	0.36891676396732553	4				NaN	NaN	0	NaN	10817	3824	14641
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14644	37.44	NaN	7510	30	0	1470.8	0.106	+			44390	TSLKFFLNK	9	63	366.5496911257668	1096.6272439775005	3	366.5501403808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TSLKFFLNK_	ENSG00000164292|ENST00000379982|RHOBTB3;RHOBTB3|p.K539Rfs*53|1|0.25|ENSG00000164292|chr5:95783952-95783952|A/-|frameshift_variant	37.81151784470057	0.4459294069877048	4				NaN	NaN	0	NaN	10818	3824	14641
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14645	37.442	NaN	5793.7	30	0	635.62	0.106	+			12004	FVTSSHLQL	9	67	516.2787785343462	1030.5430041354923	2	516.2793579101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FVTSSHLQL_	ENSG00000142207|ENST00000382751|URB1	65.46538089061403	0.16805504838372562	4				NaN	NaN	0	NaN	10819	3824	14641
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14646	37.444	NaN	3443.1	30	0	378.11	0.106	+			33103	RELLWGKGG	9	64	508.2876422444942	NaN	0	508.2875671386719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RELLWGKGG_	chr11:430403-430860|103|12.48|0.37|5.06|-|0|ANO9,None|1	31.529811441608018	0.3183796599642538	4				NaN	NaN	0	NaN	10820	3824	14641
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14647	37.446	NaN	6834.9	30	0	930.08	0.036	+			44782	TTQKLVLEY	9	74	547.8076372102769	1093.6007214873537	2	547.8084106445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TTQKLVLEY_	ENSG00000136848|ENST00000408936|DAB2IP;nc|ENSG00000136848|Q5VWQ8-2|DAB2IP;nc|ENSG00000136848|Q5VWQ8-3|DAB2IP;nc|ENSG00000136848|Q5VWQ8-4|DAB2IP;nc|ENSG00000136848|Q5VWQ8-5|DAB2IP	85.16082228582465	0.07850854922700509	4				NaN	NaN	0	NaN	10821	3824	14641
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14648	37.447	NaN	22038	30	0	2075	0.14	+			529	ADADLLLRY	9	85	525.2837617030718	1048.5529704729436	2	525.786865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ADADLLLRY_	ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1	70.8162118820467	0.13725933411854815	4				NaN	NaN	0	NaN	10822	3824	14641
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14659	37.472	NaN	130840	30	0	41530	0.171	+			41702	SVSDLFNTK	9	92	505.7607910001407	1009.5070290670815	2	505.7618408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSDLFNTK_	ENSG00000054654|ENST00000555002|SYNE2;ENST00000557005.1_1_14:64469755-64489638:+|nuORF;nc|ENSG00000054654|Q8WXH0|SYNE2;SYNE2|p.A5240Qfs*5|1|0.07|ENSG00000054654|chr14:64152639-64152639|G/-|frameshift_variant;SYNE2|p.D3074Ffs*8|1|0.07|ENSG00000054654|chr14:64053132-64053133|-/TTTCTTTTTCAAATACTTG|frameshift_variant;SYNE2|p.F2563Ifs*28|1|0.34|ENSG00000054654|chr14:64051593-64051594|-/A|frameshift_variant;SYNE2|p.F2840Lfs*3|1|0.38|ENSG00000054654|chr14:64052427-64052427|T/-|frameshift_variant;SYNE2|p.F4992Lfs*13|1|0.39|ENSG00000054654|chr14:64140067-64140067|T/-|frameshift_variant;SYNE2|p.L5308Ifs*18|1|0.12|ENSG00000054654|chr14:64158750-64158751|GG/-|frameshift_variant;SYNE2|p.S1830Kfs*9|1|0.34|ENSG00000054654|chr14:64021985-64021986|-/A|frameshift_variant;SYNE2|p.S6651Rfs*83|1|0.29|ENSG00000054654|chr14:64220596-64220597|-/G|frameshift_variant	152.06079943815163	0.00638878961959199	4				NaN	NaN	0	NaN	10830	3827	14658
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14660	37.475	NaN	9654.9	30	0	2059.5	0.106	+			7190	DAHISSML	8	62	437.20977467650715	872.4049964198143	2	437.21038818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DAHISSML_	ENSG00000096433|ENST00000605930|ITPR3;ITPR3|p.N1746Tfs*30|1|0.2|ENSG00000096433|chr6:33684872-33684872|A/-|frameshift_variant;ITPR3|p.R2604Gfs*30|1|0.27|ENSG00000096433|chr6:33694944-33694944|C/-|frameshift_variant	68.484700416344	0.4195245774506064	4				NaN	NaN	0	NaN	10831	3827	14658
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14661	37.477	NaN	18475	30	0	9181.9	0.106				-1	 	0	79	527.2894197559003	1052.5642865786006	2	527.2908935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10832	3827	14658
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14662	37.479	NaN	5966.5	30	0	1313.9	0.106			+	7776	DPDVWLPIL	9	75	534.2916047546976	1066.568656576195	2	534.2928466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DPDVWLPIL_	REV__RTTN|p.R1378P|1|0.15|ENSG00000176225|chr18:70092120-70092120|C/G|missense_variant	40.77816245573522	0.41113185337114944	4				NaN	NaN	0	NaN	10833	3827	14658
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14663	37.48	NaN	2436	30	0	278.35	0.106	+			8261	EAGIKVHDV	9	60	484.2634921113435	966.512431289487	2	484.2640686035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EAGIKVHDV_	ENSG00000183508|ENST00000369448|TENT5C	54.776311868738084	0.25715957988447635	4				NaN	NaN	0	NaN	10834	3827	14658
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14664	37.482	NaN	3807.4	30	0	440.75	0.106			+	21898	KRRLPNQQ	8	68	520.3098627076381	1038.6051724820761	2	520.3106689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KRRLPNQQ_	REV__ENST00000593093.5_1_19:1273631-1273697:+|nuORF	30.503639358989545	0.7238069182250283	4				NaN	NaN	0	NaN	10835	3827	14658
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14665	37.484	NaN	3506.4	30	0	278.31	0.034				-1	 	0	60	476.23717765881497	950.45980238443	2	476.2387390136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10836	3827	14658
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14674	37.504	NaN	23212	30	0	3478.8	0.214				-1	 	0	86	593.8548644988238	1185.6951760644474	2	593.8555908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10842	3830	14673
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14675	37.508	NaN	5808.7	30	0	539.79	0.106	+			36488	SEVVDVAKL	9	79	480.273401261713	958.532249590226	2	480.2735595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEVVDVAKL_	ENSG00000145555|ENST00000513610|MYO10;nc|ENSG00000145555|Q9HD67-3|MYO10	124.08010499294276	0.018729767491916592	4				NaN	NaN	0	NaN	10843	3830	14673
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14676	37.509	NaN	9394.9	30	0	1226	0.106	+			23810	LCQFSWML	8	76	514.2410357843687	1026.4675186355373	2	514.2415771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LCQFSWML_	ENSG00000164199|ENST00000405460|ADGRV1;nc|ENSG00000164199|Q8WXG9-2|ADGRV1	60.29395666154354	0.49887135096048313	4				NaN	NaN	0	NaN	10844	3830	14673
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14677	37.511	NaN	3467	30	0	705.67	0.106	+			35002	SAAVILHSPL	10	43	336.53426418257783	NaN	0	336.53424072265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SAAVILHSPL_	ENSG00000107362|ENST00000333421|ABHD17B;nc|ENSG00000107362|Q5VST6-2|ABHD17B	16.473147378115264	0.4201028297492154	4				NaN	NaN	0	NaN	10845	3830	14673
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14678	37.513	NaN	6636.8	30	0	647.61	0.106	+			2063	ALALVSMGF	9	75	462.74805512610556	923.4815573190111	2	462.7497863769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_ALALVSM(Oxidation (M))GF_	ENSG00000249581|ENST00000511148|CLRN2	76.84663266511073	0.11118375776443899	4				NaN	NaN	0	NaN	10846	3830	14673
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14679	37.515	NaN	3382.7	30	0	350.17	0.106			+	20806	KIEIFNND	8	69	496.7561754107081	991.4977978882163	2	496.756591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KIEIFNND_	REV__tr|U7STN0|U7STN0_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01547PE=4SV=1	75.04331003522576	0.3648751570195447	4				NaN	NaN	0	NaN	10847	3830	14673
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14680	37.517	NaN	2429.6	30	0	661.26	0.038				-1	DDMCLKYFV	9	65	603.7614539838665	1205.508355034533	2	603.76220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C),Oxidation (M)	_DDM(Oxidation (M))C(Carbamidomethyl (C))LKYFV_	ENSG00000120438|ENST00000321394|TCP1;ENST00000412860.1_1_7:42834686-42835559:+|nuORF;ENST00000414406.2_1_12:20095069-20095366:+|nuORF	37.15910966729921	0.4535818937225704	4				NaN	NaN	0	NaN	10848	3830	14673
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14692	37.542	NaN	12757	30	0	1858.7	0.214	+			37556	SLMHSFILK	9	78	538.3006224262253	1074.5866919192506	2	538.3021850585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLMHSFILK_	ENSG00000125971|ENST00000357156|DYNLRB1;ENST00000480759.1_1_20:33117938-33128425:+|nuORF	120.8684288430529	0.02067403653475984	4				NaN	NaN	0	NaN	10857	3833	14691
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14693	37.546	NaN	6428.8	30	0	316.35	0.106	+			46528	VEYQMKSVL	9	87	548.7882376283533	1095.5619223235065	2	548.7894897460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VEYQMKSVL_	ENSG00000159140|ENST00000356577|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-4|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-6|SON;nc|ENSG00000159140|P18583-7|SON;nc|ENSG00000159140|P18583-8|SON;nc|ENSG00000159140|P18583-9|SON	93.5975768576971	0.05472259948179787	4				NaN	NaN	0	NaN	10858	3833	14691
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14694	37.548	NaN	5082.9	30	0	826.09	0.106	+			47293	VNGQEKYLI	9	69	532.2921466272624	1062.5697403213246	2	532.2926635742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VNGQEKYLI_	ENSG00000140983|ENST00000315082|RHOT2;ENST00000561711.1_1_16:721970-722707:+|nuORF;ENST00000602564.5_1_16:722464-722707:+|nuORF	63.30626980617807	0.18605348971131092	4				NaN	NaN	0	NaN	10859	3833	14691
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14695	37.549	NaN	3206.2	30	0	929.58	0.106			+	37567	SLMQRLAGSL	10	47	359.2030967237629	1074.5874607714886	3	359.5378112792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLMQRLAGSL_	REV__ENST00000532345.1_1_11:62557457-62557526:+|nuORF	28.081489160057373	0.6505064946289502	4				NaN	NaN	0	NaN	10860	3833	14691
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14696	37.551	NaN	1534.7	30	0	108.68	0.106				-1	 	0	41	353.7153574248701	705.4161619165402	2	353.7158508300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10861	3833	14691
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14697	37.553	NaN	2838.1	30	0	419.94	0.036			+	30192	PSLSRAMVKE	10	64	559.3045492357306	1116.5945455382612	2	559.3060913085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PSLSRAMVKE_	REV__ENSG00000103197|ENST00000219476|TSC2;REV__nc|ENSG00000103197|P49815-2|TSC2;REV__nc|ENSG00000103197|P49815-3|TSC2;REV__nc|ENSG00000103197|P49815-4|TSC2;REV__nc|ENSG00000103197|P49815-5|TSC2;REV__nc|ENSG00000103197|P49815-6|TSC2;REV__nc|ENSG00000103197|P49815-7|TSC2;REV__TSC2|p.S1427Vfs*49|1|0.21|ENSG00000103197|chr16:2084499-2084499|A/-|frameshift_variant	33.921630207806714	0.6028135429846169	4				NaN	NaN	0	NaN	10862	3833	14691
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14698	37.554	NaN	3146.5	30	0	295.47	0.14			+	8699	EEAVKGAPV	9	61	450.24523429032166	NaN	0	450.2451171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EEAVKGAPV_	REV__ENSG00000143458|ENST00000368918|GABPB2	58.78195531508484	0.1545138866451181	4				NaN	NaN	0	NaN	10863	3833	14691
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14706	37.574	NaN	8725.7	30	0	1171.9	0.214	+			12910	GESGIKVAVL	10	69	486.7890731889631	971.5635934447262	2	486.78955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GESGIKVAVL_	ENSG00000164091|ENST00000296490|WDR82;ENST00000487402.1_1_3:52291508-52301068:-|nuORF	88.17693792209575	0.14151128060301246	4				NaN	NaN	0	NaN	10868	3836	14705
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14707	37.577	NaN	6698.6	30	0	2819.5	0.106				-1	 	0	58	448.2892941950156	894.5640354568312	2	448.2895202636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10869	3836	14705
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14708	37.579	NaN	7932.8	30	0	1275	0.106				-1	 	0	72	596.7911860778761	1191.567819222552	2	596.7919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10870	3836	14705
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14709	37.581	NaN	2815.8	30	0	506.04	0.106	+			8972	EFLLKQDVV	9	66	545.8114195465874	1089.6082861599748	2	546.3099365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EFLLKQDVV_	ENSG00000103174|ENST00000312251|NAGPA;ENST00000564397.5_1_16:5078879-5079041:-|nuORF;ENST00000568202.5_1_16:5075546-5083878:-|nuORF;nc|ENSG00000103174|Q9UK23-2|NAGPA;nc|ENSG00000103174|Q9UK23-3|NAGPA	41.080066990542036	0.4075906340427724	4				NaN	NaN	0	NaN	10871	3836	14705
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14710	37.583	NaN	2579.3	30	0	204.75	0.106	+			30776	QDSLALQPKL	10	72	556.8186508904154	1111.6227488476306	2	556.819091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QDSLALQPKL_	ENSG00000144824|ENST00000431670|PHLDB2;nc|ENSG00000144824|Q86SQ0-2|PHLDB2;nc|ENSG00000144824|Q86SQ0-3|PHLDB2;PHLDB2|p.K1064Nfs*28|1|0.29|ENSG00000144824|chr3:111967696-111967696|A/-|frameshift_variant;PHLDB2|p.K665Rfs*6|1|0.22|ENSG00000144824|chr3:111920409-111920409|A/-|frameshift_variant;PHLDB2|p.P552Hfs*18|1|0.06|ENSG00000144824|chr3:111913637-111913638|-/AT|frameshift_variant;PHLDB2|p.S734Ifs*5|1|0.07|ENSG00000144824|chr3:111939544-111939545|-/TAACT|frameshift_variant;PHLDB2|p.V822Lfs*6|1|0.1|ENSG00000144824|chr3:111945316-111945316|G/-|frameshift_variant	41.42661286455405	0.5359995577334734	4				NaN	NaN	0	NaN	10872	3836	14705
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14711	37.585	NaN	1332	30	0	159.59	0.038			+	36571	SFSKGCDPCKY	11	62	617.7643801784135	1233.5142074236269	2	617.7664794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SFSKGCDPCKY_	REV__ENSG00000180938|ENST00000319286|ZNF572	42.86426827375447	0.5187511139693657	4				NaN	NaN	0	NaN	10873	3836	14705
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14712	37.585	NaN	1683.5	30	0	117.97	0.141			+	-1	CNKSSGIR	8	58	453.7266569960089	905.4387610588178	2	453.7268981933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))CNKSSGIR_	REV__ENST00000336976.10_1_19:44598546-44600499:+|nuORF	26.69291269510374	0.7532304684939817	4				NaN	NaN	0	NaN	10874	3836	14705
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14718	37.603	NaN	7729	30	0	887.05	0.214				-1	 	0	79	524.8102664283163	1047.6059799234324	2	524.8114013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10877	3839	14717
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14719	37.607	NaN	6759.5	30	0	939.44	0.106	+			14019	GSFVSSLVK	9	64	462.2630638895148	922.5115748458296	2	462.2630615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSFVSSLVK_	ENSG00000172016|ENST00000305165|REG3A	80.45461616416974	0.09558281504443908	4				NaN	NaN	0	NaN	10878	3839	14717
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14720	37.609	NaN	3645.3	30	0	559.79	0.106				-1	 	0	75	632.81879841736	1263.6230439015198	2	632.8195190429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10879	3839	14717
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14721	37.611	NaN	4310.6	30	0	911.21	0.106				-1	 	0	62	477.80219608693636	953.5898392406727	2	477.8026428222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10880	3839	14717
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14722	37.612	NaN	5564.9	30	0	890.53	0.106			+	24010	LEDIRLKP	8	66	492.2970458839064	982.5795388346128	2	492.2973937988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LEDIRLKP_	REV__tr|U7SQ46|U7SQ46_FUSNUMetallo-beta-lactamasedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01689PE=4SV=1	63.30626980617807	0.4690498839812213	4				NaN	NaN	0	NaN	10881	3839	14717
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14723	37.614	NaN	2019.1	30	0	145.88	0.106			+	24923	LKSESLAP	8	61	422.7418420388101	843.4691311444202	2	422.7418518066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LKSESLAP_	REV__ENST00000358537.7_1_3:58095823-58097578:+|nuORF	52.29916861842294	0.578018602984656	4				NaN	NaN	0	NaN	10882	3839	14717
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14724	37.616	NaN	2602.3	30	0	259.32	0.034				-1	 	0	68	468.7136058587405	935.412658784281	2	468.71368408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10883	3839	14717
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14733	37.636	NaN	14343	30	0	5267	0.214				-1	 	0	66	371.58457068907865	1111.731882667436	3	371.5850524902344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10889	3842	14732
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14734	37.64	NaN	2805.8	30	0	229.06	0.106	+			12313	GDFKAYAL	8	61	442.7287286294975	883.442904325795	2	442.72857666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GDFKAYAL_	ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;ENST00000574894.1_1_16:16367711-16371421:+|nuORF;nc|ENSG00000185164|Q5JPE7-3|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2;NOMO1|p.P1102Hfs*42|1|0.36|ENSG00000103512|chr16:14886838-14886838|C/-|frameshift_variant	65.80317337860623	0.44433089765398776	4				NaN	NaN	0	NaN	10890	3842	14732
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14735	37.642	NaN	1755.4	30	0	150.19	0.106	+			24946	LLAAGSVAL	9	46	407.7547567897019	813.4949606462038	2	407.75506591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LLAAGSVAL_	sp|P16756|UL14_HCMVAUncharacterizedproteinUL14OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL14PE=3SV=2;sp|Q6SWB7|UL14_HCMVMUncharacterizedproteinUL14OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL14PE=3SV=1	68.484700416344	0.1473408039581241	4				NaN	NaN	0	NaN	10891	3842	14732
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14736	37.643	NaN	3659	30	0	328.09	0.106	+			43186	TETVHIFKL	9	70	544.3108405323431	1086.6071281314862	2	544.3112182617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TETVHIFKL_	ENSG00000070540|ENST00000262139|WIPI1;ENSG00000157954|ENST00000288828|WIPI2;ENST00000466014.5_1_7:5232953-5270575:+|nuORF;ENST00000488359.1_1_7:5256722-5265562:+|nuORF;ENST00000589459.5_1_17:66423364-66453609:-|nuORF;nc|ENSG00000070540|Q5MNZ9-2|WIPI1;nc|ENSG00000157954|Q9Y4P8-2|WIPI2;nc|ENSG00000157954|Q9Y4P8-3|WIPI2;nc|ENSG00000157954|Q9Y4P8-4|WIPI2;nc|ENSG00000157954|Q9Y4P8-5|WIPI2;nc|ENSG00000157954|Q9Y4P8-6|WIPI2	58.22992032128504	0.22837015374068087	4				NaN	NaN	0	NaN	10892	3842	14732
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14737	37.645	NaN	3099.2	30	0	271.74	0.106				-1	 	0	54	377.2523690451126	752.4901851570252	2	377.2527160644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10893	3842	14732
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14738	37.647	NaN	4359	30	0	1436.8	0.037	+			32639	QYVDFHNQL	9	72	582.277132375328	1162.539711817456	2	582.27734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QYVDFHNQL_	ENSG00000134899|ENST00000652225|ERCC5;nc|ENSG00000134899|P28715-2|ERCC5	39.252832667884924	0.4290233611298554	4				NaN	NaN	0	NaN	10894	3842	14732
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14746	37.667	NaN	8227.1	30	0	635.51	0.214				-1	 	0	71	503.28943567804725	1004.5643184228945	2	503.2900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10899	3845	14745
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14747	37.67	NaN	7035.4	30	0	2113.4	0.106			+	1132	AELTVARVL	9	63	486.2966374346029	970.5787219360059	2	486.2977600097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AELTVARVL_	REV__ENSG00000138078|ENST00000409411|PREPL;REV__nc|ENSG00000138078|Q4J6C6-2|PREPL;REV__nc|ENSG00000138078|Q4J6C6-3|PREPL;REV__nc|ENSG00000138078|Q4J6C6|PREPL	60.97194046774394	0.20551255781574032	4				NaN	NaN	0	NaN	10900	3845	14745
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14748	37.672	NaN	6641.8	30	0	1709.8	0.106			+	47488	VQFFGTIIT	9	75	513.2870097237243	1024.5594665142485	2	513.2867431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VQFFGTIIT_	REV__CPNE2|p.T543Pfs*121|1|0.24|ENSG00000140848|chr16:57147632-57147632|C/-|frameshift_variant	52.936696900407355	0.27249468807391813	4				NaN	NaN	0	NaN	10901	3845	14745
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14749	37.674	NaN	4300.7	30	0	668.83	0.106	+			9146	EGMKGIVL	8	63	423.7407473130158	845.4669416928316	2	423.7413635253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EGMKGIVL_	ENSG00000145623|ENST00000274276|OSMR;nc|ENSG00000145623|Q99650-2|OSMR;OSMR|p.N900Tfs*3|1|0.34|ENSG00000145623|chr5:38933197-38933197|A/-|frameshift_variant;OSMR|p.T617Qfs*20|4|0.4|ENSG00000145623|chr5:38923227-38923227|A/-|frameshift_variant;REV__ENSG00000106688|ENST00000262352|SLC1A1;REV__SLC1A1|p.K232Rfs*12|1|0.25|ENSG00000106688|chr9:4572313-4572313|A/-|frameshift_variant;REV__SLC1A1|p.Q413Rfs*5|1|0.28|ENSG00000106688|chr9:4583078-4583078|C/-|frameshift_variant	65.80317337860623	0.44433089765398776	4				NaN	NaN	0	NaN	10902	3845	14745
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14750	37.676	NaN	5409.8	30	0	596.19	0.106			+	23204	KYARLVAE	8	64	475.27653182380357	948.5385107144072	2	475.2765197753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KYARLVAE_	REV__UNC13C|p.A976V|1|0.38|ENSG00000137766|chr15:54015830-54015830|C/T|missense_variant	57.81127852772723	0.5234495074909924	4				NaN	NaN	0	NaN	10903	3845	14745
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14751	37.678	NaN	4737	30	0	304.78	0.035			+	-1	DCKNGVLVL	9	67	509.2729688109727	1016.5313846887454	2	509.27288818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_DC(Carbamidomethyl (C))KNGVLVL_	REV__ENSG00000187682|ENST00000636362|ERAS	51.33545320467046	0.2872990594074956	4				NaN	NaN	0	NaN	10904	3845	14745
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14752	37.678	NaN	3230.5	30	0	264.42	0.141			+	-1	MWVRARHE	8	68	550.7751525834766	1099.535752233753	2	550.7764282226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_M(Oxidation (M))WVRARHE_	REV__ENSG00000139835|ENST00000375431|GRTP1;REV__nc|ENSG00000139835|Q5TC63-3|GRTP1	24.20275056022122	0.7724576178584145	4				NaN	NaN	0	NaN	10905	3845	14745
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14762	37.702	NaN	11127	30	0	1508.4	0.214	+			17636	IEKEGEFTL	9	76	533.2754773122801	1064.5364016913602	2	533.277099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IEKEGEFTL_	ENSG00000169189|ENST00000361439|NSMCE1;ENST00000565070.5_1_16:27237776-27268891:-|nuORF;ENST00000569236.5_1_16:27236480-27252833:-|nuORF	93.1432384553994	0.056003526918089595	4				NaN	NaN	0	NaN	10912	3848	14761
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14763	37.706	NaN	5743.8	30	0	1016.8	0.106			+	50877	YFKIINDPA	9	70	540.7902290554638	1079.5659051777275	2	540.7919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YFKIINDPA_	REV__ENSG00000116580|ENST00000368331|GON4L;REV__ENSG00000163374|ENST00000355499|YY1AP1;REV__ENST00000436865.5_1_1:155629450-155649007:-|nuORF;REV__ENST00000442834.6_1_1:155629450-155640310:-|nuORF;REV__GON4L|p.E1831Rfs*8|1|0.18|ENSG00000116580|chr1:155756984-155756985|-/T|frameshift_variant;REV__GON4L|p.P1077Lfs*24|1|0.34|ENSG00000116580|chr1:155766243-155766243|G/-|frameshift_variant;REV__nc|ENSG00000116580|Q3T8J9-2|GON4L;REV__nc|ENSG00000116580|Q3T8J9-3|GON4L;REV__nc|ENSG00000163374|Q9H869-3|YY1AP1;REV__nc|ENSG00000163374|Q9H869-4|YY1AP1;REV__nc|ENSG00000163374|Q9H869-5|YY1AP1;REV__nc|ENSG00000163374|Q9H869-6|YY1AP1;REV__nc|ENSG00000163374|Q9H869-7|YY1AP1;REV__nc|ENSG00000163374|Q9H869-8|YY1AP1;REV__nc|ENSG00000163374|Q9H869-9|YY1AP1;REV__nc|ENSG00000163374|Q9H869|YY1AP1	61.691277971877994	0.19951612995419254	4				NaN	NaN	0	NaN	10913	3848	14761
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14764	37.707	NaN	4830.8	30	0	408.06	0.106	+			689	AEALATHIL	9	73	469.76690008785505	937.5192472425101	2	469.7679138183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEALATHIL_	AKAP11|p.C1327Lfs*13|1|0.05|ENSG00000023516|chr13:42302724-42302725|-/CTTCTACTTTATAATC|frameshift_variant;AKAP11|p.F1607Sfs*48|1|0.11|ENSG00000023516|chr13:42303562-42303562|T/-|frameshift_variant;AKAP11|p.H1753Ifs*3|1|0.11|ENSG00000023516|chr13:42308589-42308589|T/-|frameshift_variant;ENSG00000023516|ENST00000025301|AKAP11	96.19043198914106	0.047412499214244314	4				NaN	NaN	0	NaN	10914	3848	14761
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14765	37.709	NaN	5474.4	30	0	569.84	0.106	+			29576	PFHTSTEMF	9	76	548.7412077719356	1095.467862610671	2	548.7423706054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PFHTSTEMF_	DHRS3|p.G229D|1|0.1|ENSG00000162496|chr1:12578730-12578730|C/T|missense_variant;ENSG00000162496|ENST00000616661|DHRS3	88.64286706044652	0.06869153472052109	4				NaN	NaN	0	NaN	10915	3848	14761
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14766	37.711	NaN	4526	30	0	932.28	0.106	+			42116	SYLKDTKLW	9	59	385.21308765515994	1152.61743356568	3	385.2131652832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SYLKDTKLW_	ENSG00000102572|ENST00000539966|STK24;nc|ENSG00000102572|Q9Y6E0|STK24	36.446750945000026	0.4619375763483977	4				NaN	NaN	0	NaN	10916	3848	14761
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14767	37.713	NaN	3522.9	30	0	1085.1	0.036				-1	 	0	70	552.2684125181016	551.2611360515016	1	552.270263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10917	3848	14761
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14768	37.713	NaN	3216	30	0	317.2	0.14			+	28334	NEGVTLVFY	9	65	521.2664230864441	1040.518293239688	2	521.26708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NEGVTLVFY_	REV__ENSG00000009335|ENST00000348165|UBE3C;REV__nc|ENSG00000009335|Q15386-2|UBE3C;REV__nc|ENSG00000009335|Q15386-3|UBE3C;REV__UBE3C|p.F500Lfs*4|1|0.37|ENSG00000009335|chr7:157207477-157207478|TT/-|frameshift_variant	53.351449002276354	0.2690372970092375	4				NaN	NaN	0	NaN	10918	3848	14761
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14773	37.73	NaN	2411.7	30	0	274.13	0.214			+	16262	HEFLKEMT	8	60	517.7517130043617	1033.4888730755233	2	517.7526245117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HEFLKEMT_	REV__HINFP|p.F32L|1|0.33|ENSG00000172273|chr11:119127040-119127040|C/A|missense_variant	34.172542307311794	0.6954784234644539	4				NaN	NaN	0	NaN	10920	3851	14772
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14774	37.733	NaN	2508.1	30	0	288.07	0.106			+	19328	KAILTVAAP	9	59	442.2839243239406	882.5532957146812	2	442.28399658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KAILTVAAP_	REV__ENST00000360655.8_2_11:19372274-19372361:+|nuORF	44.116797842482775	0.37197099687881774	4				NaN	NaN	0	NaN	10921	3851	14772
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14775	37.735	NaN	3144.1	30	0	724.87	0.106	+			6687	AYVHMVTHF	9	69	552.7693063121297	NaN	0	552.7695922851562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AYVHMVTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	71.37791200682192	0.10092813839350395	4				NaN	NaN	0	NaN	10922	3851	14772
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14776	37.737	NaN	2703.4	30	0	335.2	0.106			+	24355	LFLVSTSPG	9	60	460.7569844617383	919.4994159902766	2	460.7571105957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LFLVSTSPG_	REV__ENSG00000204671|ENST00000377035|IL31	38.80614096846853	0.43426287593479557	4				NaN	NaN	0	NaN	10923	3851	14772
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14777	37.739	NaN	2025	30	0	276.14	0.106			+	37449	SLIGVPVGL	9	48	427.77042044594975	853.5262879586995	2	427.77069091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SLIGVPVGL_	REV__ENSG00000187741|ENST00000389301|FANCA;REV__FANCA|p.E800Gfs*16|1|0.13|ENSG00000187741|chr16:89769934-89769944|CATCCACCTCT/-|frameshift_variant;REV__FANCA|p.G972Afs*17|1|0.37|ENSG00000187741|chr16:89758643-89758643|C/-|frameshift_variant;REV__FANCA|p.V925Rfs*18|1|0.2|ENSG00000187741|chr16:89764895-89764896|-/G|frameshift_variant;REV__nc|ENSG00000187741|O15360-2|FANCA;REV__nc|ENSG00000187741|O15360-3|FANCA	68.484700416344	0.1473408039581241	4				NaN	NaN	0	NaN	10924	3851	14772
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14778	37.74	NaN	1375	30	0	138.02	0.106	+			26195	LSRVLKGGSV	10	37	339.2153720559564	NaN	0	339.21514892578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSRVLKGGSV_	ALK|p.Q908Rfs*3|1|0.19|ENSG00000171094|chr2:29228977-29228977|G/-|frameshift_variant;ALK|p.R620Mfs*7|1|0.03|ENSG00000171094|chr2:29275455-29275456|-/A|frameshift_variant;ALK|p.W915Gfs*24|1|0.42|ENSG00000171094|chr2:29228957-29228957|C/-|frameshift_variant;ENSG00000171094|ENST00000389048|ALK	32.75053402867276	0.3926392905881664	4				NaN	NaN	0	NaN	10925	3851	14772
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14779	37.742	NaN	2876.7	30	0	439.71	0.037	+			10933	FDPVPNLQLL	10	72	578.3258294159065	1154.6371058986128	2	578.3240966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FDPVPNLQLL_	ENSG00000165300|ENST00000683689|SLITRK5;nc|ENSG00000165300|O94991-2|SLITRK5;SLITRK5|p.A906Qfs*20|1|0.09|ENSG00000165300|chr13:87678100-87678100|G/-|frameshift_variant;SLITRK5|p.H899Ifs*27|1|0.27|ENSG00000165300|chr13:87678079-87678079|C/-|frameshift_variant;SLITRK5|p.Y855Tfs*5|1|0.21|ENSG00000165300|chr13:87677948-87677948|T/-|frameshift_variant	68.84614121027924	0.2867470276772903	4				NaN	NaN	0	NaN	10926	3851	14772
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14784	37.757	NaN	41179	30	0	3917.5	0.214	+			49954	VYVVGTAHF	9	89	496.76326322710327	991.5119735210066	2	497.2655334472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYVVGTAHF_	ENSG00000170638|ENST00000380909|TRABD;ENST00000463233.1_1_22:50624392-50636456:+|nuORF;nc|ENSG00000170638|Q9H4I3-2|TRABD	94.00642277110589	0.05356993013874309	4				NaN	NaN	0	NaN	10928	3854	14783
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14785	37.76	NaN	10474	30	0	780.17	0.106				-1	 	0	73	510.2915222784455	1018.568491623691	2	510.292236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10929	3854	14783
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14786	37.762	NaN	3633.9	30	0	420.52	0.106	+			20921	KIYDEKDF	8	75	529.2628517344369	1056.5111505356738	2	529.2642211914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KIYDEKDF_	tr|U7T3N0|U7T3N0_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00466PE=4SV=1	47.657333605630114	0.6087971902037268	4				NaN	NaN	0	NaN	10930	3854	14783
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14787	37.764	NaN	2719.8	30	0	403.06	0.106	+			39338	STCEAVMILR	10	65	590.2959431902773	1178.5773334473545	2	590.2968139648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_STC(Carbamidomethyl (C))EAVMILR_	ENSG00000167081|ENST00000373489|PBX3;ENSG00000185630|ENST00000420696|PBX1;ENSG00000204304|ENST00000375050|PBX2;ENST00000478678.5_1_6:32154995-32157692:-|nuORF;ENST00000538998.1_1_9:128606084-128725334:+|nuORF;nc|ENSG00000167081|P40426-2|PBX3;nc|ENSG00000167081|P40426-3|PBX3;nc|ENSG00000167081|P40426-4|PBX3;nc|ENSG00000167081|P40426-5|PBX3;nc|ENSG00000185630|P40424-2|PBX1;nc|ENSG00000185630|P40424-3|PBX1	78.26377905018397	0.20980573808910843	4				NaN	NaN	0	NaN	10931	3854	14783
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14788	37.766	NaN	2311.4	30	0	237.95	0.106	+			10403	EVEVFEKPK	9	46	368.8693701152937	1103.5862809460812	3	368.8695983886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EVEVFEKPK_	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42|TTN;TTN|p.A12650Gfs*4|1|0.4|ENSG00000155657|chr2:178633489-178633490|-/T|frameshift_variant;TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;TTN|p.D20259Rfs*40|1|0.44|ENSG00000155657|chr2:178583105-178583106|-/T|frameshift_variant;TTN|p.D21555Ifs*6|1|0.33|ENSG00000155657|chr2:178576659-178576659|G/-|frameshift_variant;TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;TTN|p.E15132Sfs*22|1|0.27|ENSG00000155657|chr2:178612094-178612094|C/-|frameshift_variant;TTN|p.E20392Dfs*6|1|0.04|ENSG00000155657|chr2:178582357-178582358|-/TTTAAAATTA|frameshift_variant;TTN|p.E20392Kfs*4|1|0.02|ENSG00000155657|chr2:178582359-178582360|-/TTTT|frameshift_variant;TTN|p.F18705Lfs*8|1|0.37|ENSG00000155657|chr2:178590687-178590687|A/-|frameshift_variant;TTN|p.G12742Vfs*2|1|0.05|ENSG00000155657|chr2:178632983-178632983|C/-|frameshift_variant;TTN|p.G14712Dfs*11|1|0.37|ENSG00000155657|chr2:178614341-178614341|G/-|frameshift_variant;TTN|p.G19920Afs*12|1|0.42|ENSG00000155657|chr2:178584961-178584961|G/-|frameshift_variant;TTN|p.G22029Efs*22|2|0.13|ENSG00000155657|chr2:178575125-178575125|T/-|frameshift_variant;TTN|p.I24998Nfs*2|1|0.35|ENSG00000155657|chr2:178566216-178566217|-/T|frameshift_variant;TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;TTN|p.K11381Nfs*25|1|0.07|ENSG00000155657|chr2:178671133-178671133|T/-|frameshift_variant;TTN|p.K11556Sfs*15|1|0.39|ENSG00000155657|chr2:178652287-178652287|T/-|frameshift_variant;TTN|p.K14271Qfs*5|1|0.02|ENSG00000155657|chr2:178617351-178617352|-/G|frameshift_variant;TTN|p.K26626Nfs*34|1|0.34|ENSG00000155657|chr2:178561331-178561331|T/-|frameshift_variant;TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant;TTN|p.N13487Tfs*49|1|0.34|ENSG00000155657|chr2:178621335-178621335|T/-|frameshift_variant;TTN|p.N15496Ifs*16|1|0.09|ENSG00000155657|chr2:178610116-178610116|T/-|frameshift_variant;TTN|p.P16126Rfs*3|1|0.25|ENSG00000155657|chr2:178607301-178607302|TG/-|frameshift_variant;TTN|p.P22810Hfs*10|1|0.03|ENSG00000155657|chr2:178572780-178572781|-/AAAT|frameshift_variant;TTN|p.V13823*|1|0.28|ENSG00000155657|chr2:178620027-178620027|C/-|frameshift_variant;TTN|p.V22573Cfs*4|2|0.31|ENSG00000155657|chr2:178573492-178573492|C/-|frameshift_variant;TTN|p.V27442Cfs*4|1|0.05|ENSG00000155657|chr2:178558107-178558108|-/A|frameshift_variant	24.20275056022122	0.577060078256802	4				NaN	NaN	0	NaN	10932	3854	14783
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14789	37.768	NaN	1708.3	30	0	202.04	0.106			+	47697	VSELTFAY	8	56	465.23478936866195	NaN	0	465.2345275878906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VSELTFAY_	REV__ENSG00000164756|ENST00000456015|SLC30A8;REV__SLC30A8|p.A64Rfs*22|1|0.57|ENSG00000164756|chr8:117147068-117147068|G/-|frameshift_variant	28.2542754592877	1.7418937515398478	4				NaN	NaN	0	NaN	10933	3854	14783
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14790	37.769	NaN	1665	30	0	324.67	0.037	+			25419	LPLQAGEIGEM	11	62	587.2948130503125	NaN	0	587.2943725585938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_LPLQAGEIGEM(Oxidation (M))_	ENST00000536823.5_1_12:10853889-10856822:-|nuORF	42.86426827375447	0.36657022113551535	4				NaN	NaN	0	NaN	10934	3854	14783
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14800	37.791	NaN	14302	30	0	1305.9	0.214	+			6163	AVQGISGLPLK	11	76	541.8315091351035	1081.6484653370069	2	541.83251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVQGISGLPLK_	ENSG00000167721|ENST00000301364|TSR1	79.28313171465074	0.1583491868274477	4				NaN	NaN	0	NaN	10941	3857	14799
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14801	37.795	NaN	9226.9	30	0	1484.7	0.106			+	50950	YIDDELKAV	9	78	533.2754773122801	1064.5364016913602	2	532.7724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YIDDELKAV_	REV__ENSG00000142621|ENST00000688493|FHAD1;REV__ENST00000477846.5_1_1:15707235-15714865:+|nuORF;REV__ENST00000495195.5_1_1:15707786-15709690:+|nuORF;REV__nc|ENSG00000142621|B1AJZ9-3|FHAD1;REV__nc|ENSG00000142621|B1AJZ9-4|FHAD1;REV__nc|ENSG00000142621|B1AJZ9|FHAD1	44.116797842482775	0.37197099687881774	4				NaN	NaN	0	NaN	10942	3857	14799
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14802	37.797	NaN	3144.6	30	0	730.5	0.106	+			45915	VAQNSGLTL	9	60	451.75019489315775	NaN	0	451.7503662109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VAQNSGLTL_	ENSG00000221829|ENST00000378643|FANCG	90.36981228632155	0.04085092656593507	4				NaN	NaN	0	NaN	10943	3857	14799
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14803	37.798	NaN	2834.9	30	0	180.99	0.106	+			49573	VYDTVFKHF	9	70	578.2948421606943	1154.5751313881885	2	578.294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VYDTVFKHF_	ENSG00000185404|ENST00000415673|SP140L;nc|ENSG00000185404|Q9H930-1|SP140L;nc|ENSG00000185404|Q9H930-2|SP140L;SP140L|p.F492Lfs*17|1|0.46|ENSG00000185404|chr2:230401414-230401414|T/-|frameshift_variant;SP140L|p.M88Nfs*3|1|0.34|ENSG00000185404|chr2:230357955-230357956|-/A|frameshift_variant	60.97194046774394	0.20551255781574032	4				NaN	NaN	0	NaN	10944	3857	14799
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14804	37.8	NaN	4208.2	30	0	496.75	0.106				-1	IMTRGNAKY	9	68	535.2744710443139	1068.5343891554278	2	535.7783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_IM(Oxidation (M))TRGNAKY_	ENSG00000075856|ENST00000546815|SART3;nc|ENSG00000075856|Q15020-4|SART3	38.80614096846853	0.43426287593479557	4				NaN	NaN	0	NaN	10945	3857	14799
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14805	37.802	NaN	3761.1	30	0	230.82	0.036			+	17533	IDQEEINQP	9	69	543.2608272064753	1084.5071014797504	2	543.7603149414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IDQEEINQP_	REV__CCDC168|p.G6141Lfs*25|1|0.03|ENSG00000175820|chr13:102732276-102732277|-/AGGAAAAATCACCAAACACTAG|frameshift_variant;REV__CCDC168|p.K5937Nfs*10|1|0.37|ENSG00000175820|chr13:102732886-102732886|T/-|frameshift_variant;REV__CCDC168|p.K6236Nfs*3|1|0.42|ENSG00000175820|chr13:102731989-102731989|T/-|frameshift_variant;REV__ENSG00000175820|ENST00000322527|CCDC168	35.15202426646627	0.4747332964206883	4				NaN	NaN	0	NaN	10946	3857	14799
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14806	37.803	NaN	4485.6	30	0	618.97	0.141	+			7986	DSYPLYAIY	9	73	552.7693063121297	NaN	0	552.7681884765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DSYPLYAIY_	ENSG00000143921|ENST00000272286|ABCG8;nc|ENSG00000143921|Q9H221-2|ABCG8	52.29916861842294	0.1908481487866478	4				NaN	NaN	0	NaN	10947	3857	14799
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14816	37.826	NaN	9715.2	30	0	1975.9	0.214	+			41639	SVQSGNLAL	9	66	444.7424839051866	887.4704148771732	2	444.74261474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVQSGNLAL_	ENSG00000011304|ENST00000356948|PTBP1;ENST00000586944.5_1_19:797434-805231:+|nuORF;nc|ENSG00000011304|P26599-1|PTBP1;nc|ENSG00000011304|P26599-2|PTBP1	141.52041321563706	0.009766778904176347	4				NaN	NaN	0	NaN	10954	3860	14815
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14817	37.83	NaN	5710.4	30	0	1058.6	0.106	+			12992	GEVCIKGTNVF	11	70	612.3072292819577	1222.5999056307153	2	612.3078002929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GEVC(Carbamidomethyl (C))IKGTNVF_	ENSG00000197142|ENST00000354655|ACSL5;ENST00000496328.1_1_10:114181742-114186129:+|nuORF;nc|ENSG00000197142|Q9ULC5-3|ACSL5;nc|ENSG00000197142|Q9ULC5-4|ACSL5	63.69406221917213	0.2904805327065929	4				NaN	NaN	0	NaN	10955	3860	14815
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14818	37.832	NaN	5815.8	30	0	835.99	0.106	+			47396	VPLKGIVSY	9	71	488.29673630457773	974.5789196759555	2	488.29705810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VPLKGIVSY_	ENSG00000138078|ENST00000409411|PREPL;nc|ENSG00000138078|Q4J6C6-2|PREPL;nc|ENSG00000138078|Q4J6C6-3|PREPL;nc|ENSG00000138078|Q4J6C6|PREPL	66.96192283764107	0.15557981141143568	4				NaN	NaN	0	NaN	10956	3860	14815
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14819	37.834	NaN	10348	30	0	1063.4	0.106	+			811	AEFVGVSHL	9	65	479.752710795736	957.490868658272	2	479.7529602050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEFVGVSHL_	ENSG00000141101|ENST00000268802|NOB1;ENST00000502915.1_1_4:139481866-139482694:+|nuORF	104.74654710444128	0.034358562718640136	4				NaN	NaN	0	NaN	10957	3860	14815
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14820	37.835	NaN	4148.4	30	0	673.3	0.106	+			41703	SVSDLFNTK	9	63	505.7607910001407	1009.5070290670815	2	505.76123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVSDLFNTK_	ENSG00000054654|ENST00000555002|SYNE2;ENST00000557005.1_1_14:64469755-64489638:+|nuORF;nc|ENSG00000054654|Q8WXH0|SYNE2;SYNE2|p.A5240Qfs*5|1|0.07|ENSG00000054654|chr14:64152639-64152639|G/-|frameshift_variant;SYNE2|p.D3074Ffs*8|1|0.07|ENSG00000054654|chr14:64053132-64053133|-/TTTCTTTTTCAAATACTTG|frameshift_variant;SYNE2|p.F2563Ifs*28|1|0.34|ENSG00000054654|chr14:64051593-64051594|-/A|frameshift_variant;SYNE2|p.F2840Lfs*3|1|0.38|ENSG00000054654|chr14:64052427-64052427|T/-|frameshift_variant;SYNE2|p.F4992Lfs*13|1|0.39|ENSG00000054654|chr14:64140067-64140067|T/-|frameshift_variant;SYNE2|p.L5308Ifs*18|1|0.12|ENSG00000054654|chr14:64158750-64158751|GG/-|frameshift_variant;SYNE2|p.S1830Kfs*9|1|0.34|ENSG00000054654|chr14:64021985-64021986|-/A|frameshift_variant;SYNE2|p.S6651Rfs*83|1|0.29|ENSG00000054654|chr14:64220596-64220597|-/G|frameshift_variant	60.11826168202944	0.21262886028301267	4				NaN	NaN	0	NaN	10958	3860	14815
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14821	37.837	NaN	7661.3	30	0	1509.1	0.036	+			11784	FSNLTTHKR	9	78	552.3021262560181	1102.5896995788362	2	552.3026733398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FSNLTTHKR_	ENSG00000196172|ENST00000402377|ZNF681;ENSG00000198521|ENST00000354959|ZNF43;ENSG00000198521|ENST00000354959|ZNF43;nc|ENSG00000196172|Q96N22-2|ZNF681;nc|ENSG00000198521|P17038-2|ZNF43;nc|ENSG00000198521|P17038-2|ZNF43;ZNF43|p.I363T|1|0.18|ENSG00000198521|chr19:21808949-21808949|A/G|missense_variant	54.776311868738084	0.25715957988447635	4				NaN	NaN	0	NaN	10959	3860	14815
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14822	37.838	NaN	1301.4	30	0	94.066	0.14			+	30240	PSTILHEL	8	49	455.25519674352387	NaN	0	455.25555419921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PSTILHEL_	REV__ENST00000504041.1_1_5:179754-182435:+|nuORF	53.351449002276354	1.7418937515398478	4				NaN	NaN	0	NaN	10960	3860	14815
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14830	37.858	NaN	14037	30	0	2149.4	0.214			+	7650	DKQFVLGK	8	70	467.7707816639473	933.5270103946946	2	467.7710266113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DKQFVLGK_	REV__ENSG00000107960|ENST00000224950|STN1;REV__ENST00000466828.5_1_10:105642444-105658073:-|nuORF	113.41158876095287	0.24327961457765637	4				NaN	NaN	0	NaN	10965	3863	14829
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14831	37.861	NaN	5506.9	30	0	588.63	0.106	+			50729	YEIHDGMNL	9	64	546.2443342187221	1090.474115504244	2	546.2454223632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YEIHDGMNL_	ENSG00000198258|ENST00000586895|UBL5	66.42927471994793	0.16001998865088202	4				NaN	NaN	0	NaN	10966	3863	14829
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14832	37.863	NaN	2858.8	30	0	592.13	0.106	+			31996	QRGQLLRH	8	36	336.53426418257783	NaN	0	336.5343322753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QRGQLLRH_	ENSG00000197362|ENST00000491431|ZNF786;nc|ENSG00000197362|Q8N393-2|ZNF786	13.775330524044264	1.7418937515398478	4				NaN	NaN	0	NaN	10967	3863	14829
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14833	37.865	NaN	4010.1	30	0	1656.3	0.106	+			34760	RYFENPQVI	9	67	583.3036684050254	1164.5927838768507	2	583.8064575195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RYFENPQVI_	ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;TRRAP-ASNS|1|fusion;TRRAP-ASNS|2|fusion;TRRAP|p.A1620Cfs*35|1|0.27|ENSG00000196367|chr7:98949499-98949500|-/G|frameshift_variant;TRRAP|p.I564Hfs*9|1|0.29|ENSG00000196367|chr7:98910389-98910390|-/G|frameshift_variant;TRRAP|p.K3443Sfs*19|1|0.28|ENSG00000196367|chr7:99004246-99004246|A/-|frameshift_variant;TRRAP|p.L291*|1|0.36|ENSG00000196367|chr7:98900691-98900691|T/-|frameshift_variant;TRRAP|p.P1292Lfs*17|1|0.44|ENSG00000196367|chr7:98933258-98933258|C/-|frameshift_variant;TRRAP|p.P1360Afs*14|1|0.05|ENSG00000196367|chr7:98935641-98935642|-/GCAAATAA|frameshift_variant	50.033510581677724	0.3025703251535696	4				NaN	NaN	0	NaN	10968	3863	14829
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14834	37.867	NaN	3101	30	0	618.89	0.106			+	32533	QVRTRIVDM	9	54	373.2094262372505	1116.6064493119516	3	373.2100830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QVRTRIVDM_	REV__ENSG00000160785|ENST00000359511|SLC25A44	25.57405402267927	0.5642445186134241	4				NaN	NaN	0	NaN	10969	3863	14829
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14835	37.869	NaN	4382	30	0	495.36	0.106	+			1471	AFIQKSNLI	9	71	517.3048013979725	1032.5950498627449	2	517.3064575195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AFIQKSNLI_	ENSG00000167635|ENST00000443387|ZNF146	91.26522074875469	0.06129826844580791	4				NaN	NaN	0	NaN	10970	3863	14829
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14836	37.87	NaN	2104.7	30	0	401.26	0.034	+			41314	SVLPKASTL	9	55	458.27759765084505	914.5406423684901	2	458.2787170410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVLPKASTL_	ENSG00000146247|ENST00000275034|PHIP;ENST00000479165.1_1_6:79650412-79665440:-|nuORF	42.396135135203025	0.392153681582562	4				NaN	NaN	0	NaN	10971	3863	14829
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14841	37.884	NaN	8840.9	30	0	3057	0.214			+	16580	HGADQFGSSF	10	73	526.7249561356158	1051.4353593380315	2	526.7259521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HGADQFGSSF_	REV__ENSG00000142733|ENST00000357582|MAP3K6;REV__nc|ENSG00000142733|O95382-2|MAP3K6;REV__nc|ENSG00000142733|O95382-3|MAP3K6	60.11826168202944	0.36476464221954025	4				NaN	NaN	0	NaN	10973	3866	14840
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14842	37.888	NaN	2246.4	30	0	211	0.106				-1	MLGLNKVL	8	60	473.27531159249236	944.5360702517847	2	473.2753601074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))M(Oxidation (M))LGLNKVL_	ENST00000374902.8_1_9:103109594-103109660:-|nuORF	35.200714571348534	0.6875396545722289	4				NaN	NaN	0	NaN	10974	3866	14840
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14843	37.89	NaN	2812.8	30	0	533.15	0.106	+			51502	YVPKEHIL	8	64	499.7875953332191	NaN	0	499.78741455078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YVPKEHIL_	ENSG00000157870|ENST00000419916|PRXL2B;ENST00000484099.5_1_1:2518532-2520863:+|nuORF;ENST00000493183.5_1_1:2517940-2520863:+|nuORF;nc|ENSG00000157870|Q8TBF2-3|PRXL2B;nc|ENSG00000157870|Q8TBF2-4|PRXL2B;nc|ENSG00000157870|Q8TBF2-6|PRXL2B	35.200714571348534	1.7418937515398478	4				NaN	NaN	0	NaN	10975	3866	14840
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14844	37.891	NaN	2406.5	30	0	263.09	0.106	+			46712	VGLPRVEV	8	56	434.7656708571229	867.5167887810459	2	434.765869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VGLPRVEV_	SYNPO2|p.A279V|2|0.19|ENSG00000172403|chr4:119027205-119027205|C/T|missense_variant	35.200714571348534	0.6875396545722289	4				NaN	NaN	0	NaN	10976	3866	14840
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14845	37.893	NaN	3208.8	30	0	487.17	0.106	+			9621	ELPPNINIK	9	65	519.3032709866609	1036.5919890401217	2	520.3106079101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ELPPNINIK_	ENSG00000164466|ENST00000321442|SFXN1;ENST00000507395.1_1_5:174919106-174919271:+|nuORF;ENST00000513725.1_1_5:174919106-174937211:+|nuORF	35.15202426646627	0.4747332964206883	4				NaN	NaN	0	NaN	10977	3866	14840
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14846	37.895	NaN	2521.6	30	0	332.84	0.106	+			16691	HITVGHETVM	10	68	562.2806106179333	1122.5466683026666	2	562.281982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HITVGHETVM_	ENSG00000132394|ENST00000254730|EEFSEC;nc|ENSG00000132394|P57772-2|EEFSEC	32.81241826257853	0.6118718159329168	4				NaN	NaN	0	NaN	10978	3866	14840
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14847	37.897	NaN	2480.2	30	0	279.26	0.036	+			27713	MQGPWVLLL	9	69	536.798698209659	NaN	0	536.79833984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_M(Oxidation (M))QGPWVLLL_	ENSG00000163286|ENST00000295453|ALPG;ENSG00000163295|ENST00000295463|ALPI	52.29916861842294	0.1908481487866478	4				NaN	NaN	0	NaN	10979	3866	14840
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14853	37.912	NaN	10687	30	0	1515.3	0.214	+			17713	IENGHIFTV	9	78	515.2714085485627	1028.5282641639253	2	515.2716674804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IENGHIFTV_	ENSG00000036257|ENST00000264414|CUL3;nc|ENSG00000036257|Q13618-2|CUL3;nc|ENSG00000036257|Q13618-3|CUL3	89.02883481214508	0.06760336634167786	4				NaN	NaN	0	NaN	10982	3869	14852
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14854	37.916	NaN	15137	30	0	1322.7	0.106				-1	HLTMLNIY	8	85	510.7617604670144	1019.5089680008289	2	510.76104736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_HLTM(Oxidation (M))LNIY_	DHX35|p.E553K|1|0.05|ENSG00000101452|chr20:39023753-39023753|G/A|missense_variant;ENSG00000101452|ENST00000252011|DHX35;nc|ENSG00000101452|Q9H5Z1-2|DHX35	62.97842346883844	0.4722955155785405	4				NaN	NaN	0	NaN	10983	3869	14852
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14855	37.918	NaN	7545.5	30	0	1021.8	0.106			+	26058	LSLPSHTM	8	63	443.22819755737925	884.4418421815585	2	443.2284240722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSLPSHTM_	REV__ENST00000228799.6_1_12:2933460-2933670:+|nuORF	68.484700416344	0.4195245774506064	4				NaN	NaN	0	NaN	10984	3869	14852
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14856	37.919	NaN	6567.2	30	0	2038.5	0.106			+	18898	IVLPGRFLK	9	38	348.2301357788566	1041.66857793677	3	348.23040771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IVLPGRFLK_	REV__ENSG00000198420|ENST00000479870|TCAF1;REV__ENST00000392900.3_1_7:143551228-143582358:-|nuORF;REV__ENST00000414990.2_3_7:143295168-143301929:+|nuORF;REV__nc|ENSG00000198420|Q9Y4C2-2|TCAF1	27.882242232435846	0.5426732730940306	4				NaN	NaN	0	NaN	10985	3869	14852
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14857	37.921	NaN	4809.2	30	0	634.79	0.106	+			16270	HEGDIILKI	9	70	519.3032709866609	1036.5919890401217	2	519.3032836914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HEGDIILKI_	ENSG00000119139|ENST00000377245|TJP2;nc|ENSG00000119139|Q9UDY2-2|TJP2;nc|ENSG00000119139|Q9UDY2-3|TJP2;nc|ENSG00000119139|Q9UDY2-4|TJP2;nc|ENSG00000119139|Q9UDY2-5|TJP2;nc|ENSG00000119139|Q9UDY2-6|TJP2;nc|ENSG00000119139|Q9UDY2-7|TJP2;TJP2|p.F813Sfs*12|1|0.23|ENSG00000119139|chr9:69240013-69240013|T/-|frameshift_variant;TJP2|p.P484Qfs*30|1|0.18|ENSG00000119139|chr9:69228107-69228107|C/-|frameshift_variant;TJP2|p.T849Rfs*12|1|0.32|ENSG00000119139|chr9:69240120-69240120|A/-|frameshift_variant	83.6470233535746	0.08277643980271215	4				NaN	NaN	0	NaN	10986	3869	14852
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14858	37.923	NaN	3090.8	30	0	395.27	0.106			+	33767	RPVFAQSSDW	10	71	596.7911860778761	1191.567819222552	2	596.7923583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RPVFAQSSDW_	REV__ENST00000492538.1_1_22:23412760-23437660:+|nuORF	32.81241826257853	0.6118718159329168	4				NaN	NaN	0	NaN	10987	3869	14852
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14859	37.925	NaN	2804.6	30	0	524.14	0.035			+	7445	DFGKTKLAK	9	67	504.29671627351854	1006.5788796138371	2	504.29754638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DFGKTKLAK_	REV__tr|U7T2X3|U7T2X3_FUSNUPropanedioldehydrataselargesubunitOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00493PE=4SV=1	42.396135135203025	0.392153681582562	4				NaN	NaN	0	NaN	10988	3869	14852
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14866	37.942	NaN	18300	30	0	1827.2	0.214			+	48743	VTVGETKLI	9	72	480.29205891224325	958.5695648912865	2	480.2919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTVGETKLI_	REV__ENSG00000171766|ENST00000396659|GATM;REV__nc|ENSG00000171766|P50440-2|GATM;REV__nc|ENSG00000171766|P50440-3|GATM	67.49366992349736	0.1516260258713357	4				NaN	NaN	0	NaN	10992	3872	14865
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14867	37.945	NaN	4631.1	30	0	645.54	0.106	+			12640	GEIKGFTGI	9	67	461.2553450182023	920.4961371032047	2	461.2554016113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEIKGFTGI_	ENSG00000138801|ENST00000265174|PAPSS1;ENSG00000198682|ENST00000456849|PAPSS2;nc|ENSG00000198682|O95340|PAPSS2	90.60085204095205	0.06317133949006545	4				NaN	NaN	0	NaN	10993	3872	14865
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14868	37.947	NaN	3313.8	30	0	428.38	0.106	+			42565	TASGVFSKF	9	60	472.24757002929925	942.4805871253985	2	472.24774169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TASGVFSKF_	ENSG00000105486|ENST00000263274|LIG1;nc|ENSG00000105486|P18858-2|LIG1;nc|ENSG00000105486|P18858-3|LIG1	51.19269402634007	0.2889735674168909	4				NaN	NaN	0	NaN	10994	3872	14865
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14869	37.949	NaN	7398.6	30	0	484.28	0.106	+			11486	FPAMKPEDK	9	78	531.7690675941318	1061.5235822550635	2	531.7703247070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FPAMKPEDK_	ENSG00000065427|ENST00000302445|KARS1;nc|ENSG00000065427|Q15046-2|KARS1	68.78682469695295	0.14603441672067394	4				NaN	NaN	0	NaN	10995	3872	14865
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14870	37.951	NaN	2530.2	30	0	241.06	0.106	+			11616	FPTYFKFIT	9	68	582.3110304256178	1162.6075079180355	2	582.3115844726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FPTYFKFIT_	tr|U7SIS7|U7SIS7_FUSNUMembraneproteinAbrBduplicationOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02216PE=4SV=1	56.72105179125745	0.24094814563026265	4				NaN	NaN	0	NaN	10996	3872	14865
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14871	37.953	NaN	6480.1	30	0	1765.5	0.106	+			41508	SVPNVLAKAL	10	71	506.3127991026544	1010.6110452721089	2	506.3137512207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVPNVLAKAL_	nc|ENSG00000050820|P56945-8|BCAR1	41.080066990542036	0.5391928043837881	4				NaN	NaN	0	NaN	10997	3872	14865
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14872	37.955	NaN	2454.4	30	0	161.8	0.033				-1	ALLLAGCAL	9	53	451.26213070718654	900.5097084811731	2	451.2622375488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_ALLLAGC(Carbamidomethyl (C))AL_	ENSG00000197496|ENST00000359271|SLC2A10;SLC2A10|p.R296H|1|0.31|ENSG00000197496|chr20:46725923-46725923|G/A|missense_variant	60.403631409065575	0.21025000616765316	4				NaN	NaN	0	NaN	10998	3872	14865
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14877	37.968	NaN	21477	30	0	5228.6	0.214	+			44786	TTQLSLSFK	9	87	512.7877259518021	NaN	0	512.788330078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTQLSLSFK_	ENSG00000198786|ENST00000361567|MT-ND5	101.45984612302182	0.018494728971010316	4				NaN	NaN	0	NaN	11000	3875	14876
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14878	37.972	NaN	16920	30	0	2800.4	0.106	+			35074	SAFGVIIEK	9	72	482.27863565674454	962.5427183802891	2	482.27972412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAFGVIIEK_	ENSG00000178440|ENST00000651763|TIMM23B-AGAP6;ENSG00000204152|ENST00000651259|TIMM23B;ENSG00000265354|ENST00000580018|TIMM23;nc|ENSG00000204152|Q5SRD1-2|TIMM23B	109.43880257439609	0.029570636687953285	4				NaN	NaN	0	NaN	11001	3875	14876
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14879	37.974	NaN	5655.3	30	0	1812.9	0.106			+	23515	LAHKYKEI	8	75	501.2917291566994	1000.5689053801988	2	501.2926330566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LAHKYKEI_	REV__tr|U7T8H9|U7T8H9_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00060PE=4SV=1	44.116797842482775	0.6307669463330267	4				NaN	NaN	0	NaN	11002	3875	14876
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14880	37.975	NaN	8365.2	30	0	560.89	0.106	+			27460	MLNKELWE	8	71	531.7690675941318	1061.5235822550635	2	531.770751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MLNKELWE_	tr|U7SV96|U7SV96_FUSNUThreonine--tRNAligaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=thrSPE=3SV=1	66.42927471994793	0.4381325844043345	4				NaN	NaN	0	NaN	11003	3875	14876
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14881	37.977	NaN	3213.7	30	0	467.12	0.106			+	29793	PIRPTVTSL	9	75	492.2970458839064	982.5795388346128	2	492.2981262207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PIRPTVTSL_	REV__ENSG00000145375|ENST00000274008|SPATA5	39.252832667884924	0.4290233611298554	4				NaN	NaN	0	NaN	11004	3875	14876
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14882	37.979	NaN	3153.3	30	0	755.49	0.106	+			3861	ATAMLQSLLK	10	71	546.3098137435175	1090.6050745538348	2	546.3111572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_ATAM(Oxidation (M))LQSLLK_	ENSG00000196586|ENST00000369977|MYO6;nc|ENSG00000196586|Q9UM54-2|MYO6;nc|ENSG00000196586|Q9UM54-4|MYO6;nc|ENSG00000196586|Q9UM54-5|MYO6;nc|ENSG00000196586|Q9UM54-6|MYO6;nc|ENSG00000196586|Q9UM54|MYO6	60.1669710687717	0.3643216362415131	4				NaN	NaN	0	NaN	11005	3875	14876
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14883	37.981	NaN	3070.5	30	0	242.36	0.037	+			18340	IQDSNQYQF	9	68	571.75873647728	1141.5029200213598	2	571.7609252929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IQDSNQYQF_	ENSG00000128833|ENST00000261839|MYO5C;ENST00000558902.5_1_15:52529812-52548856:-|nuORF;ENST00000560809.5_1_15:52532054-52548856:-|nuORF;MYO5C|p.E1050Sfs*8|1|0.32|ENSG00000128833|chr15:52229192-52229192|C/-|frameshift_variant;MYO5C|p.L1151Wfs*19|1|0.17|ENSG00000128833|chr15:52223719-52223719|A/-|frameshift_variant;MYO5C|p.L933Hfs*33|1|0.04|ENSG00000128833|chr15:52237552-52237553|-/T|frameshift_variant;MYO5C|p.L933Sfs*35|1|0.04|ENSG00000128833|chr15:52237553-52237554|-/AAGTGGA|frameshift_variant	87.69643885390035	0.07135982304947239	4				NaN	NaN	0	NaN	11006	3875	14876
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14888	37.995	NaN	6529.9	30	0	1633.2	0.214	+			4197	ATFTGILGK	9	60	454.265521055222	906.516489177244	2	454.26617431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATFTGILGK_	ENST00000534553.5_1_11:61722629-61730618:+|nuORF;nc|ENSG00000167995|O76090-3|BEST1	67.49366992349736	0.1516260258713357	4				NaN	NaN	0	NaN	11008	3878	14887
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14889	37.998	NaN	3530.6	30	0	367.58	0.106			+	23973	LDVENLMVI	9	72	523.2830352247274	1044.5515175162548	2	523.2846069335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LDVENLMVI_	REV__ENSG00000152894|ENST00000368226|PTPRK;REV__nc|ENSG00000152894|Q15262-3|PTPRK;REV__nc|ENSG00000152894|Q15262-4|PTPRK;REV__nc|ENSG00000152894|Q15262|PTPRK	47.657333605630114	0.33044192980041115	4				NaN	NaN	0	NaN	11009	3878	14887
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14890	38	NaN	3875	30	0	661.13	0.106				-1	MLLMCRWV	8	72	554.7773539298975	1107.5401549265948	2	554.7781372070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_MLLMC(Carbamidomethyl (C))RWV_	ENST00000525088.5_1_11:67201493-67201556:+|nuORF	44.53106598305862	0.628196326904373	4				NaN	NaN	0	NaN	11010	3878	14887
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14891	38.002	NaN	2883.3	30	0	632.09	0.106			+	30110	PRLFASWLQ	9	50	373.2094180452962	1116.6064247360887	3	373.5441589355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PRLFASWLQ_	REV__ENST00000296679.8_1_5:76788170-76788245:-|nuORF	23.04248740728303	0.5879033540491928	4				NaN	NaN	0	NaN	11011	3878	14887
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14892	38.004	NaN	2098.5	30	0	215.06	0.106			+	8663	EDSNVLDDDE	10	65	575.7248852074903	1149.4352174817805	2	575.7266845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EDSNVLDDDE_	REV__ENSG00000119787|ENST00000378954|ATL2;REV__nc|ENSG00000119787|Q8NHH9-2|ATL2;REV__nc|ENSG00000119787|Q8NHH9-4|ATL2;REV__nc|ENSG00000119787|Q8NHH9-5|ATL2	40.77816245573522	0.5419747034533848	4				NaN	NaN	0	NaN	11012	3878	14887
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14893	38.006	NaN	2510.5	30	0	370.91	0.106				-1	PNAEGPGRASC	11	69	558.2493875290542	NaN	0	558.248779296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_PNAEGPGRASC(Carbamidomethyl (C))_	AGRN|p.L1006Wfs*34|1|0.18|ENSG00000188157|chr1:1046497-1046497|C/-|frameshift_variant;AGRN|p.P627Rfs*105|2|0.32|ENSG00000188157|chr1:1043899-1043899|C/-|frameshift_variant;ENSG00000188157|ENST00000379370|AGRN;nc|ENSG00000188157|O00468-2|AGRN;nc|ENSG00000188157|O00468-3|AGRN;nc|ENSG00000188157|O00468-4|AGRN;nc|ENSG00000188157|O00468-5|AGRN;nc|ENSG00000188157|O00468-7|AGRN;nc|ENSG00000188157|O00468|AGRN	37.50817390946774	0.39825797133360086	4				NaN	NaN	0	NaN	11013	3878	14887
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14894	38.007	NaN	2123.7	30	0	201.46	0.037	+			48793	VTYVPVTTFK	10	67	577.8256438588345	1153.636734784469	2	577.825927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VTYVPVTTFK_	ENSG00000071082|ENST00000264258|RPL31;ENST00000431088.1_1_2:223591487-223591550:+|nuORF;nc|ENSG00000071082|P62899-2|RPL31;nc|ENSG00000071082|P62899-3|RPL31	35.15202426646627	0.5927656479315102	4				NaN	NaN	0	NaN	11014	3878	14887
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14900	38.023	NaN	11306	30	0	1688.5	0.214	+			17008	HPTIISESF	9	72	515.7632588179757	1029.5119647027514	2	515.7647094726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HPTIISESF_	CCT4|p.T490Lfs*30|1|0.4|ENSG00000115484|chr2:61872105-61872105|T/-|frameshift_variant;ENSG00000115484|ENST00000394440|CCT4;nc|ENSG00000115484|P50991-2|CCT4	68.78682469695295	0.14603441672067394	4				NaN	NaN	0	NaN	11017	3881	14899
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14901	38.026	NaN	8288.4	30	0	1591	0.106			+	26362	LTCLKRNM	8	86	526.2752901412268	1050.5360273492536	2	526.27587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_LTC(Carbamidomethyl (C))LKRNM(Oxidation (M))_	REV__ENSG00000205329|ENST00000641740|OR6C3	56.72105179125745	0.5342425954139568	4				NaN	NaN	0	NaN	11018	3881	14899
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14902	38.028	NaN	3977.3	30	0	493.15	0.106			+	31525	QLISHLAL	8	60	447.7736901753203	893.5328274174407	2	447.7737121582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QLISHLAL_	REV__ENST00000398019.6_2_18:61442942-61449706:+|nuORF	58.78195531508484	0.5138399468736706	4				NaN	NaN	0	NaN	11019	3881	14899
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14903	38.03	NaN	2700.9	30	0	396.27	0.106	+			35754	SDVAHGVWIGG	11	68	549.2719350806804	1096.5293172281606	2	549.2733764648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SDVAHGVWIGG_	ENSG00000004399|ENST00000324093|PLXND1;nc|ENSG00000004399|Q9Y4D7-2|PLXND1;PLXND1|p.P1734Hfs*40|1|0.26|ENSG00000004399|chr3:129559716-129559716|G/-|frameshift_variant;PLXND1|p.S1268Qfs*34|1|0.3|ENSG00000004399|chr3:129569907-129569908|-/C|frameshift_variant;PLXND1|p.T1897Rfs*17|1|0.06|ENSG00000004399|chr3:129556402-129556402|G/-|frameshift_variant	40.77816245573522	0.5472954108598816	4				NaN	NaN	0	NaN	11020	3881	14899
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14904	38.032	NaN	3745.5	30	0	462.18	0.106	+			19803	KEDAGWYTV	9	72	534.753879371307	1067.493205809414	2	534.7540893554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEDAGWYTV_	ENSG00000129116|ENST00000505667|PALLD;ENST00000507699.1_1_4:169819634-169847533:+|nuORF;nc|ENSG00000129116|Q8WX93-2|PALLD;nc|ENSG00000129116|Q8WX93-3|PALLD;nc|ENSG00000129116|Q8WX93-4|PALLD;nc|ENSG00000129116|Q8WX93-5|PALLD;nc|ENSG00000129116|Q8WX93-7|PALLD;nc|ENSG00000129116|Q8WX93-8|PALLD;nc|ENSG00000129116|Q8WX93|PALLD	45.97224482568171	0.3502073465782774	4				NaN	NaN	0	NaN	11021	3881	14899
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14905	38.034	NaN	1925.1	30	0	279.65	0.106				-1	 	0	56	652.024829443787	1953.052658931561	3	652.3607177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11022	3881	14899
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14906	38.035	NaN	2426.2	30	0	233.36	0.034				-1	 	0	61	485.7995182032899	969.5844834733798	2	486.2961730957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11023	3881	14899
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14910	38.049	NaN	8786.1	30	0	725.66	0.214			+	-1	TPTTCATLR	9	78	510.7617604670144	1019.5089680008289	2	510.2619934082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_TPTTC(Carbamidomethyl (C))ATLR_	REV__ENST00000421097.6_2_17:40715139-40715316:+|nuORF	74.25504064058377	0.12238981753128622	4				NaN	NaN	0	NaN	11024	3884	14909
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14911	38.053	NaN	10312	30	0	1192	0.106			+	23618	LAPSRGSMTTY	11	84	600.2895397580315	1198.564526582863	2	600.2905883789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LAPSRGSM(Oxidation (M))TTY_	REV__ENSG00000183317|ENST00000373048|EPHA10;REV__ENST00000446149.6_1_1:38181546-38201012:-|nuORF;REV__EPHA10|p.R869Gfs*10|1|0.12|ENSG00000183317|chr1:37719566-37719566|G/-|frameshift_variant;REV__nc|ENSG00000183317|Q5JZY3-3|EPHA10	59.93077597824379	0.32407304095777845	4				NaN	NaN	0	NaN	11025	3884	14909
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14912	38.055	NaN	3866.7	30	0	1036.2	0.106	+			10129	ESPPSLAAPL	10	75	491.26604139103205	980.5175298488641	2	491.265869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ESPPSLAAPL_	ENSG00000187609|ENST00000340951|EXD3;ENST00000475006.1_1_9:140262369-140269195:-|nuORF;nc|ENSG00000187609|Q8N9H8-4|EXD3	58.78195531508484	0.37691818691852547	4				NaN	NaN	0	NaN	11026	3884	14909
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14913	38.057	NaN	5153.6	30	0	361.9	0.106			+	-1	LVVRVLMC	8	67	503.28383507260963	1004.5531172120193	2	503.2845458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_LVVRVLM(Oxidation (M))C(Carbamidomethyl (C))_	REV__ENST00000492901.1_1_17:1619854-1633810:+|nuORF	44.53106598305862	0.628196326904373	4				NaN	NaN	0	NaN	11027	3884	14909
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14914	38.058	NaN	2894.9	30	0	161.24	0.106	+			11477	FNTVSHEKY	9	76	562.7717469604977	1123.5289409877953	2	562.7725830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FNTVSHEKY_	CFAP54|p.R1777K|1|0.24|ENSG00000188596|chr12:96658216-96658216|G/A|missense_variant	30.317721548370564	0.5199124245378496	4				NaN	NaN	0	NaN	11028	3884	14909
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14915	38.06	NaN	2821.7	30	0	379.63	0.106				-1	PCLSAIAGAL	10	67	486.7623159895677	971.5100790459354	2	487.7687683105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_PC(Carbamidomethyl (C))LSAIAGAL_	ENSG00000198838|ENST00000634891|RYR3;nc|ENSG00000198838|Q15413-2|RYR3;nc|ENSG00000198838|Q15413-3|RYR3;RYR3|p.E3943Rfs*18|1|0.12|ENSG00000198838|chr15:33837800-33837801|-/A|frameshift_variant;RYR3|p.N4580Mfs*8|1|0.37|ENSG00000198838|chr15:33853618-33853618|A/-|frameshift_variant	30.503639358989545	0.6307262373768582	4				NaN	NaN	0	NaN	11029	3884	14909
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14916	38.062	NaN	2845	30	0	171.04	0.036			+	25275	LNQVSLSVLK	10	76	550.8366658501757	1099.6587787671513	2	550.8387451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LNQVSLSVLK_	REV__CTSS|p.A164V|1|0.29|ENSG00000163131|chr1:150751917-150751917|G/A|missense_variant	40.05817265558897	0.5486090488315611	4				NaN	NaN	0	NaN	11030	3884	14909
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14928	38.087	NaN	9001.7	30	0	2189.5	0.214	+			466	AAVPRAAFL	9	67	458.2737554806244	914.5329580280488	2	458.27398681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAVPRAAFL_	ENSG00000089248|ENST00000261735|ERP29;ENST00000553161.1_1_12:112451251-112452397:+|nuORF;nc|ENSG00000089248|P30040-2|ERP29	57.81127852772723	0.2318599694398087	4				NaN	NaN	0	NaN	11039	3887	14927
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14929	38.09	NaN	10493	30	0	2464.5	0.106	+			4204	ATFTNVFGK	9	79	492.7606672156414	983.5067814980828	2	492.7612609863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATFTNVFGK_	ENSG00000131503|ENST00000360839|ANKHD1;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	114.8945686534367	0.024290463251177924	4				NaN	NaN	0	NaN	11040	3887	14927
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14930	38.092	NaN	9859.3	30	0	782.82	0.106	+			169	AAIVAYGLYK	10	74	534.807240662193	1067.5999283911858	2	534.8081665039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AAIVAYGLYK_	ENSG00000181061|ENST00000321331|HIGD1A;ENST00000470543.1_1_3:42826765-42845976:-|nuORF;nc|ENSG00000181061|Q9Y241-2|HIGD1A	90.77665401227738	0.12662738171778068	4				NaN	NaN	0	NaN	11041	3887	14927
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14931	38.094	NaN	2901.2	30	0	428.65	0.106	+			164	AAITLAFSK	9	59	461.273494815339	920.532436697478	2	461.2740173339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AAITLAFSK_	ENSG00000077097|ENST00000264331|TOP2B;nc|ENSG00000077097|Q02880-2|TOP2B;TOP2B|p.S1441Kfs*20|1|0.32|ENSG00000077097|chr3:25606099-25606100|-/T|frameshift_variant;TOP2B|p.S1441Vfs*41|4|0.13|ENSG00000077097|chr3:25606100-25606100|T/-|frameshift_variant;TOP2B|p.S1476Ffs*11|2|0.3|ENSG00000077097|chr3:25604822-25604823|-/A|frameshift_variant	59.93077597824379	0.21419174904018318	4				NaN	NaN	0	NaN	11042	3887	14927
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14932	38.096	NaN	2715.1	30	0	486.89	0.106	+			19379	KALTLGIAP	9	63	442.2839243239406	882.5532957146812	2	442.283935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KALTLGIAP_	ENST00000330539.1_1_8:37593798-37594005:-|nuORF	44.116797842482775	0.37197099687881774	4				NaN	NaN	0	NaN	11043	3887	14927
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14933	38.098	NaN	4454.1	30	0	380.88	0.106	+			8073	DVNMRLRF	8	66	525.7812258488284	NaN	0	525.7794189453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DVNMRLRF_	ENST00000230859.7_2_5:6755307-6755463:+|nuORF	38.80614096846853	1.7418937515398478	4				NaN	NaN	0	NaN	11044	3887	14927
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14934	38.099	NaN	4544.3	30	0	604.23	0.034	+			7260	DALVITHY	8	65	466.24721994975874	930.4798869663175	2	466.2472229003906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DALVITHY_	ENSG00000109917|ENST00000227322|ZPR1	97.47269410471826	0.25484828363392314	4				NaN	NaN	0	NaN	11045	3887	14927
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14944	38.122	NaN	6826.4	30	0	925.25	0.215				-1	 	0	69	496.79195010986496	991.5693472865299	2	496.7922668457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11052	3890	14943
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14945	38.125	NaN	4074.5	30	0	862.77	0.106	+			29225	NVYDFKTTY	9	76	575.773490384817	1149.532427836434	2	575.7739868164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NVYDFKTTY_	ENSG00000160075|ENST00000291386|SSU72;ENST00000378725.3_1_1:1480120-1509937:-|nuORF;nc|ENSG00000160075|Q9NP77-2|SSU72;SSU72|p.L82Ffs*8|1|0.34|ENSG00000160075|chr1:1544981-1544982|-/A|frameshift_variant	104.01359247289065	0.03510646158778409	4				NaN	NaN	0	NaN	11053	3890	14943
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14946	38.127	NaN	4765.5	30	0	537.37	0.106	+			8141	EAAAVFKTL	9	67	475.2711935322829	NaN	0	475.2709045410156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EAAAVFKTL_	ENSG00000138686|ENST00000264499|BBS7;ENST00000502444.1_1_4:122782546-122791468:-|nuORF;nc|ENSG00000138686|Q8IWZ6-2|BBS7	98.58198989935565	0.02429614701295995	4				NaN	NaN	0	NaN	11054	3890	14943
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14947	38.129	NaN	4779.5	30	0	701.11	0.106	+			15831	GWDPGVLGQI	10	68	521.2704230349322	1040.5262931366642	2	521.2718505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GWDPGVLGQI_	CCDC17|p.R259W|1|0.3|ENSG00000159588|chr1:45622633-45622633|G/A|missense_variant	60.11826168202944	0.36476464221954025	4				NaN	NaN	0	NaN	11055	3890	14943
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14948	38.131	NaN	5100.2	30	0	410.34	0.106			+	33286	RGLLRWME	8	69	530.7884732802154	1059.5623936272307	2	531.28759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RGLLRWME_	REV__ENSG00000174173|ENST00000309922|TRMT10C;REV__TRMT10C|p.L180Yfs*10|1|0.3|ENSG00000174173|chr3:101565316-101565316|T/-|frameshift_variant	37.15910966729921	0.6739408393984688	4				NaN	NaN	0	NaN	11056	3890	14943
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14949	38.133	NaN	2719.4	30	0	419.92	0.106				-1	GECLPLPVL	9	66	499.27229401183934	996.5300350904787	2	499.27313232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_GEC(Carbamidomethyl (C))LPLPVL_	ENSG00000171243|ENST00000307068|SOSTDC1;nc|ENSG00000171243|Q6X4U4-2|SOSTDC1	42.47446043378293	0.39123495718708534	4				NaN	NaN	0	NaN	11057	3890	14943
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14950	38.134	NaN	4023.3	30	0	270.58	0.035				-1	 	0	72	502.8281650883079	1003.6417772434158	2	502.8287048339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11058	3890	14943
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14956	38.15	NaN	14639	30	0	1191.5	0.214				-1	 	0	83	521.3055170958103	1040.5964812584205	2	521.3062133789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11061	3893	14955
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14957	38.154	NaN	9095.8	30	0	966.36	0.106	+			8285	EAIGAVIHY	9	67	486.7623159895677	971.5100790459354	2	486.76092529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EAIGAVIHY_	ENSG00000020129|ENST00000373243|NCDN;nc|ENSG00000020129|Q9UBB6-2|NCDN	100.27268790702828	0.038923639587553176	4				NaN	NaN	0	NaN	11062	3893	14955
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14958	38.156	NaN	8812.6	30	0	1635	0.106	+			247	AAMLDTVVFK	10	73	555.7962696730241	1109.577986412848	2	555.7969970703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_AAM(Oxidation (M))LDTVVFK_	ENSG00000115233|ENST00000409682|PSMD14;ENST00000477232.5_1_2:162241962-162267908:+|nuORF;ENST00000492908.1_1_2:162265323-162267908:+|nuORF	104.0567914643314	0.06564926686336217	4				NaN	NaN	0	NaN	11063	3893	14955
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14959	38.157	NaN	7573	30	0	1932.2	0.106	+			14451	GTAYGFFGK	9	67	474.23420118441686	946.4538494356337	2	474.2346496582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTAYGFFGK_	ENST00000580048.1_1_18:72264114-72264453:-|nuORF	87.69643885390035	0.07135982304947239	4				NaN	NaN	0	NaN	11064	3893	14955
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14960	38.159	NaN	5119.5	30	0	284.09	0.106	+			5867	AVIQVSQIVAR	11	69	592.3606538348107	1182.7067547364213	2	592.3617553710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVIQVSQIVAR_	ENSG00000169738|ENST00000306869|DCXR;ENST00000578885.5_1_17:79994327-79995552:-|nuORF;ENST00000582074.5_1_17:79994229-79994802:-|nuORF	82.83050618871818	0.12877585057862004	4				NaN	NaN	0	NaN	11065	3893	14955
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14961	38.161	NaN	1365.1	30	0	166.88	0.106	+			33152	RESSQSSL	8	51	447.22157123179517	NaN	0	447.2214660644531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RESSQSSL_	ENST00000530022.5_1_11:8706389-8707279:+|nuORF	68.484700416344	1.7418937515398478	4				NaN	NaN	0	NaN	11066	3893	14955
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14962	38.163	NaN	3153.8	30	0	560.99	0.034	+			12954	GESVKFQL	8	61	454.24761004493905	NaN	0	454.2475891113281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GESVKFQL_	ENSG00000009307|ENST00000358528|CSDE1;ENST00000483030.1_1_1:115263111-115268953:-|nuORF;nc|ENSG00000009307|O75534-2|CSDE1;nc|ENSG00000009307|O75534-3|CSDE1;nc|ENSG00000009307|O75534-4|CSDE1	54.776311868738084	1.7418937515398478	4				NaN	NaN	0	NaN	11067	3893	14955
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14968	38.178	NaN	7887.7	30	0	1010	0.214				-1	 	0	75	516.725690089997	1031.4368272467939	2	516.7265014648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11070	3896	14967
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14969	38.182	NaN	4205.7	30	0	381.11	0.106	+			42732	TDILVSKI	8	60	444.7732421611496	887.5319313890992	2	444.7733154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TDILVSKI_	ENSG00000158417|ENST00000289371|EIF5B	54.776311868738084	0.5534952410049249	4				NaN	NaN	0	NaN	11071	3896	14967
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14970	38.184	NaN	4861.2	30	0	547.13	0.106	+			25484	LPSEIEVKY	9	74	539.2947631417882	1076.5749733503762	2	539.29541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LPSEIEVKY_	ANAPC7|p.K150Nfs*22|1|0.27|ENSG00000196510|chr12:110395161-110395161|T/-|frameshift_variant;ENSG00000196510|ENST00000455511|ANAPC7;ENST00000464697.1_1_12:110825679-110841468:-|nuORF;ENST00000550231.1_1_12:110825542-110834223:-|nuORF;nc|ENSG00000196510|Q9UJX3-2|ANAPC7	115.49404669440601	0.023927554121326553	4				NaN	NaN	0	NaN	11072	3896	14967
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14971	38.185	NaN	2718.4	30	0	818.47	0.106				-1	 	0	52	432.7442087707048	863.4738646082096	2	432.7446594238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11073	3896	14967
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14972	38.187	NaN	4846.2	30	0	763.8	0.106				-1	 	0	55	448.7525798690675	895.490606804935	2	448.7527160644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11074	3896	14967
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14973	38.189	NaN	4745.7	30	0	441.26	0.106				-1	 	0	75	591.7922737998625	1181.569994666525	2	591.7921142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11075	3896	14967
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14974	38.191	NaN	1980.5	30	0	171.23	0.037	+			21000	KKGREEEDM	9	65	561.2678491518153	1120.5211453704305	2	561.266357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KKGREEEDM_	ENSG00000106344|ENST00000223073|RBM28;ENST00000488249.1_1_7:127975899-127977248:-|nuORF;nc|ENSG00000106344|Q9NW13-2|RBM28;RBM28|p.M599*|2|0.24|ENSG00000106344|chr7:128315014-128315014|T/-|frameshift_variant	37.15910966729921	0.4535818937225704	4				NaN	NaN	0	NaN	11076	3896	14967
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14980	38.206	NaN	5757.8	30	0	650.53	0.214	+			23471	LAERRRGL	8	71	485.7995182032899	969.5844834733798	2	485.8000793457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LAERRRGL_	ENSG00000124659|ENST00000372876|TBCC;TBCC|p.N313Efs*4|1|0.2|ENSG00000124659|chr6:42745130-42745137|CAGTTATT/-|frameshift_variant	53.351449002276354	0.5676011784961348	4				NaN	NaN	0	NaN	11079	3899	14979
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14981	38.21	NaN	4947.7	30	0	520.18	0.106			+	-1	MAAAMLPVIY	10	80	548.2812952824903	1094.5480376317805	2	548.2823486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_MAAAM(Oxidation (M))LPVIY_	REV__ENSG00000171365|ENST00000376091|CLCN5;REV__nc|ENSG00000171365|P51795-1|CLCN5	44.53106598305862	0.5073935772121767	4				NaN	NaN	0	NaN	11080	3899	14979
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14982	38.212	NaN	2906.5	30	0	479.69	0.106				-1	 	0	46	336.53376577116956	1006.5794679137086	3	336.53424072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11081	3899	14979
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14983	38.214	NaN	3883.4	30	0	371.66	0.106	+			9250	EGVLHHLH	8	70	471.2499675801701	940.4853822271402	2	471.2502746582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EGVLHHLH_	nc|ENSG00000196715|Q8N0U8-2|VKORC1L1	44.53106598305862	0.628196326904373	4				NaN	NaN	0	NaN	11082	3899	14979
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14984	38.216	NaN	3039.4	30	0	386.61	0.106			+	-1	EPCKTRKAK	9	48	373.2094180452962	1116.6064247360887	3	373.2099304199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_EPC(Carbamidomethyl (C))KTRKAK_	REV__DEK|p.E372Sfs*2|1|0.2|ENSG00000124795|chr6:18226177-18226177|T/-|frameshift_variant;REV__ENSG00000124795|ENST00000652689|DEK;REV__ENST00000512145.1_1_6:18237336-18256602:-|nuORF;REV__nc|ENSG00000124795|P35659-2|DEK	24.519189625965996	0.574102787014149	4				NaN	NaN	0	NaN	11083	3899	14979
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14985	38.217	NaN	5147.9	30	0	334.47	0.106	+			10599	EYLGSMAKI	9	71	506.26095676062045	1010.5073605880409	2	506.2629699707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EYLGSMAKI_	ENSG00000182473|ENST00000589210|EXOC7;ENST00000405068.3_1_17:74090453-74099797:-|nuORF;nc|ENSG00000182473|Q9UPT5-2|EXOC7;nc|ENSG00000182473|Q9UPT5-4|EXOC7;nc|ENSG00000182473|Q9UPT5-5|EXOC7;nc|ENSG00000182473|Q9UPT5-6|EXOC7;nc|ENSG00000182473|Q9UPT5|EXOC7	47.657333605630114	0.33044192980041115	4				NaN	NaN	0	NaN	11084	3899	14979
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14986	38.219	NaN	1814.4	30	0	159.44	0.034			+	8963	EFFTANII	8	62	477.7513335369479	953.4881141406959	2	477.75115966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EFFTANII_	REV__ENSG00000131355|ENST00000253673|ADGRE3;REV__nc|ENSG00000131355|Q9BY15-2|ADGRE3	30.503639358989545	0.7238069182250283	4				NaN	NaN	0	NaN	11085	3899	14979
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14992	38.233	NaN	6685.2	30	0	449.62	0.214	+			38552	SSFELIVQK	9	84	525.7943924219708	1049.5742319107414	2	525.79541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSFELIVQK_	ENSG00000108424|ENST00000290158|KPNB1;nc|ENSG00000108424|Q14974-2|KPNB1	104.0567914643314	0.03506238181059741	4				NaN	NaN	0	NaN	11088	3902	14991
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14993	38.237	NaN	3694.7	30	0	419.34	0.106				-1	 	0	65	471.30454285078	940.5945327683601	2	471.3048095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11089	3902	14991
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14994	38.239	NaN	3584.4	30	0	283.98	0.106	+			2479	APNFPVFVIF	10	71	575.8172861733904	1149.6200194135806	2	575.8184204101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_APNFPVFVIF_	ENSG00000146477|ENST00000275300|SLC22A3	58.78195531508484	0.37691818691852547	4				NaN	NaN	0	NaN	11090	3902	14991
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14995	38.24	NaN	2465.9	30	0	229.59	0.106	+			10447	EVLPFQIGTT	10	52	368.86937134294953	1103.5862846290486	3	368.8696594238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EVLPFQIGTT_	ENST00000480022.1_1_20:40043429-40043612:-|nuORF	26.69291269510374	0.6618461711292317	4				NaN	NaN	0	NaN	11091	3902	14991
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14996	38.242	NaN	2200.1	30	0	158.5	0.106	+			7443	DFFKERTSF	9	79	588.7884847255551	NaN	0	588.7883911132812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DFFKERTSF_	ENSG00000067113|ENST00000307259|PLPP1;nc|ENSG00000067113|O14494-2|PLPP1	56.43379154798735	0.16452882468284893	4				NaN	NaN	0	NaN	11092	3902	14991
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14997	38.244	NaN	2736.5	30	0	598.49	0.036	+			23232	KYIASAISSF	10	71	543.7957750108773	NaN	0	543.7645874023438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KYIASAISSF_	tr|U7SST6|U7SST6_FUSNUDolichol-phosphatemannosyltransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01489PE=4SV=1	37.81151784470057	0.3760215235790741	4				NaN	NaN	0	NaN	11093	3902	14991
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15004	38.262	NaN	2888.9	30	0	269.87	0.214				-1	IPISCLTEF	9	68	540.274809259425	1078.5350655856498	2	540.7752685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_IPISC(Carbamidomethyl (C))LTEF_	ENSG00000076864|ENST00000374765|RAP1GAP;nc|ENSG00000076864|P47736-2|RAP1GAP;nc|ENSG00000076864|P47736-3|RAP1GAP;nc|ENSG00000076864|P47736-4|RAP1GAP	31.954861631926434	0.5046124803899898	4				NaN	NaN	0	NaN	11097	3905	15003
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15005	38.265	NaN	3336.8	30	0	430.57	0.106	+			42087	SYGGRLLGNS	10	66	512.2658081054688	NaN	0	512.2658081054688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SYGGRLLGNS_	ENSG00000188687|ENST00000394019|SLC4A5;ENST00000451608.2_1_2:74452054-74542150:-|nuORF;ENST00000483195.5_1_2:74452054-74512997:-|nuORF;nc|ENSG00000188687|Q9BY07-2|SLC4A5;nc|ENSG00000188687|Q9BY07-4|SLC4A5;nc|ENSG00000188687|Q9BY07-5|SLC4A5;nc|ENSG00000188687|Q9BY07-6|SLC4A5;nc|ENSG00000188687|Q9BY07-7|SLC4A5;nc|ENSG00000188687|Q9BY07-8|SLC4A5;nc|ENSG00000188687|Q9BY07|SLC4A5;SLC4A5|p.S1062Pfs*46|1|0.26|ENSG00000188687|chr2:74224950-74224950|A/-|frameshift_variant	29.170058357718403	0.40439580130713204	4				NaN	NaN	0	NaN	11098	3905	15003
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15006	38.267	NaN	2329.9	30	0	207.32	0.106	+			16710	HLCCRLVS	8	60	465.735107421875	NaN	0	465.735107421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HLCCRLVS_	ENST00000533210.5_1_8:144649355-144650416:-|nuORF	28.2542754592877	1.7418937515398478	4				NaN	NaN	0	NaN	11099	3905	15003
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15007	38.269	NaN	2668.3	30	0	216.02	0.106			+	26926	LYGCHRGM	8	62	468.7137145996094	NaN	0	468.7137145996094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LYGCHRGM_	REV__ENSG00000067057|ENST00000381125|PFKP;REV__ENSG00000141959|ENST00000349048|PFKL;REV__ENSG00000152556|ENST00000359794|PFKM;REV__ENST00000397961.6_1_21:45725201-45746742:+|nuORF;REV__ENST00000466134.5_1_21:45719988-45734072:+|nuORF;REV__ENST00000546964.5_1_12:48513149-48528944:+|nuORF;REV__nc|ENSG00000067057|Q01813-2|PFKP;REV__nc|ENSG00000141959|P17858-2|PFKL;REV__nc|ENSG00000152556|P08237-2|PFKM;REV__nc|ENSG00000152556|P08237-3|PFKM;REV__PFKL|p.P704Qfs*6|1|0.29|ENSG00000141959|chr21:44326177-44326177|C/-|frameshift_variant;REV__PFKM|p.A266Efs*59|1|0.04|ENSG00000152556|chr12:48134991-48134992|-/AGGGATTT|frameshift_variant;REV__PFKP|p.R265Gfs*2|3|0.32|ENSG00000067057|chr10:3107226-3107226|A/-|frameshift_variant	41.20836394106077	1.7418937515398478	4				NaN	NaN	0	NaN	11100	3905	15003
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15008	38.271	NaN	3246.2	30	0	358.77	0.106	+			20523	KFIDTTSKF	9	69	543.7957750108773	NaN	0	543.796630859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KFIDTTSKF_	ENSG00000100316|ENST00000216146|RPL3;ENSG00000140986|ENST00000268661|RPL3L;ENST00000417615.1_1_14:99439218-99439536:-|nuORF;ENST00000473638.5_1_22:39708982-39709710:-|nuORF	30.317721548370564	0.32449924987115025	4				NaN	NaN	0	NaN	11101	3905	15003
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15009	38.273	NaN	2110.5	30	0	376.08	0.037	+			16639	HHPEPSAPRP	10	72	562.7843533660897	1123.5541537989793	2	562.7835693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HHPEPSAPRP_	CEP72|p.R176Efs*23|1|0.42|ENSG00000112877|chr5:633778-633778|C/-|frameshift_variant	30.317721548370564	0.6322445173429027	4				NaN	NaN	0	NaN	11102	3905	15003
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15015	38.287	NaN	7401.3	30	0	776.45	0.214				-1	 	0	77	484.26682735704003	966.5191017808801	2	484.2673645019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11105	3908	15014
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15016	38.29	NaN	5976.2	30	0	1151.6	0.106			+	-1	FPLLCGVVL	9	72	509.29421015246714	1016.5738673717343	2	509.2946472167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_FPLLC(Carbamidomethyl (C))GVVL_	REV__ENSG00000152207|ENST00000682523|CYSLTR2	60.403631409065575	0.21025000616765316	4				NaN	NaN	0	NaN	11106	3908	15014
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15017	38.292	NaN	3162.5	30	0	214.82	0.106				-1	LGCSARIQR	9	71	530.7884732802154	1059.5623936272307	2	530.7935180664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LGC(Carbamidomethyl (C))SARIQR_	ENST00000238721.8_1_2:24307192-24307630:-|nuORF	41.42661286455405	0.403525789677298	4				NaN	NaN	0	NaN	11107	3908	15014
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15018	38.294	NaN	3731.8	30	0	388.49	0.106			+	-1	LMKNENNKI	9	66	560.2928767791223	1118.5712006250444	2	560.2937622070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_LM(Oxidation (M))KNENNKI_	REV__ENSG00000101654|ENST00000383314|RNMT;REV__nc|ENSG00000101654|O43148-2|RNMT	84.9155231211612	0.07920012719736333	4				NaN	NaN	0	NaN	11108	3908	15014
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15019	38.296	NaN	1140.8	30	0	178.66	0.106			+	46154	VDRYLKRK	8	35	359.88879510564965	NaN	0	359.8878479003906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VDRYLKRK_	REV__ENSG00000196946|ENST00000396570|ZNF705A;REV__ENSG00000215343|ENST00000400085|ZNF705D;REV__ENSG00000215356|ENST00000400120|ZNF705B;REV__ENSG00000215372|ENST00000400156|ZNF705G;REV__nc|ENSG00000214534|A8MWA4|ZNF705EP	21.9598887501803	1.7418937515398478	4				NaN	NaN	0	NaN	11109	3908	15014
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15020	38.298	NaN	2718	30	0	324.12	0.106			+	42103	SYKEGLQSI	9	64	512.7679093771907	1023.5212658211814	2	512.7675170898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SYKEGLQSI_	REV__ENSG00000057468|ENST00000263187|MSH4	63.53385203322761	0.18415635464017938	4				NaN	NaN	0	NaN	11110	3908	15014
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15021	38.299	NaN	1815	30	0	532.71	0.038	+			51089	YLRKLCNHPA	10	35	405.55254489864353	NaN	0	405.55181884765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YLRKLCNHPA_	ENSG00000095564|ENST00000265990|BTAF1;nc|ENSG00000095564|O14981-2|BTAF1	18.262085536374414	0.4201028297492154	4				NaN	NaN	0	NaN	11111	3908	15014
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15027	38.315	NaN	3361.7	30	0	456.81	0.214			+	37367	SLFKIPGLN	9	67	494.79630993744837	987.5780669416968	2	494.79656982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLFKIPGLN_	REV__nc|ENSG00000158296|Q8WWT9-3|SLC13A3	40.05817265558897	0.419577045485086	4				NaN	NaN	0	NaN	11114	3911	15026
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15028	38.319	NaN	5415.5	30	0	1409	0.106			+	37726	SLTEPLQTY	9	65	526.2684165611096	1050.522280189019	2	526.26904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLTEPLQTY_	REV__ENSG00000188039|ENST00000524140|NWD1;REV__ENST00000438489.6_1_19:16849058-16926137:+|nuORF;REV__nc|ENSG00000188039|Q149M9|NWD1;REV__NWD1|p.N1368Kfs*41|1|0.32|ENSG00000188039|chr19:16807950-16807951|-/A|frameshift_variant	39.252832667884924	0.4290233611298554	4				NaN	NaN	0	NaN	11115	3911	15026
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15029	38.321	NaN	4370.7	30	0	264.01	0.106			+	27464	MLPICDCY	8	81	536.2193228908079	1070.4240928484157	2	536.220458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_MLPIC(Carbamidomethyl (C))DC(Carbamidomethyl (C))Y_	REV__ENSG00000150261|ENST00000279783|OR8K1	57.452649787351945	0.526999880452039	4				NaN	NaN	0	NaN	11116	3911	15026
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15030	38.323	NaN	3884.2	30	0	382.04	0.106				-1	 	0	69	468.76046006399656	935.5063671947931	2	468.7608337402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11117	3911	15026
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15031	38.324	NaN	2966.5	30	0	285.64	0.106	+			35689	SDILIHGM	8	54	443.22793044848584	884.4413079637717	2	443.22796630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SDILIHGM_	DIS3L|p.L414*|1|0.42|ENSG00000166938|chr15:66320644-66320644|T/-|frameshift_variant;ENSG00000166938|ENST00000319212|DIS3L;ENST00000524795.5_1_15:66587446-66615029:+|nuORF;ENST00000564909.5_1_15:66585934-66618751:+|nuORF;ENST00000565281.5_1_15:66585934-66615040:+|nuORF;nc|ENSG00000166938|Q8TF46-2|DIS3L;nc|ENSG00000166938|Q8TF46-3|DIS3L;nc|ENSG00000166938|Q8TF46-4|DIS3L	83.28718786952967	0.2977916691876266	4				NaN	NaN	0	NaN	11118	3911	15026
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15032	38.326	NaN	2316	30	0	215.27	0.106	+			41503	SVPLAATSM	9	55	438.7277149256861	875.4408769181722	2	438.7280578613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVPLAATSM_	ENSG00000109180|ENST00000264312|OCIAD1;ENST00000507546.5_1_4:48833247-48850510:+|nuORF;ENST00000512981.5_1_4:48833247-48854006:+|nuORF;nc|ENSG00000109180|Q9NX40-2|OCIAD1;nc|ENSG00000109180|Q9NX40-3|OCIAD1;nc|ENSG00000109180|Q9NX40-4|OCIAD1;OCIAD1|p.E233Kfs*4|2|0.22|ENSG00000109180|chr4:48857355-48857355|A/-|frameshift_variant	74.25504064058377	0.12238981753128622	4				NaN	NaN	0	NaN	11119	3911	15026
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15033	38.328	NaN	3216.9	30	0	203.37	0.035	+			35794	SEAITFQKL	9	67	518.7864871937818	1035.5584214543635	2	518.7883911132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SEAITFQKL_	ENSG00000162909|ENST00000295006|CAPN2;ENST00000483579.1_1_1:223934831-223936953:+|nuORF;nc|ENSG00000162909|P17655-2|CAPN2	67.49366992349736	0.1516260258713357	4				NaN	NaN	0	NaN	11120	3911	15026
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15040	38.344	NaN	3723.2	30	0	418.01	0.214			+	25278	LNRNLGHR	8	63	490.2814065910821	978.5482602489642	2	490.2816467285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LNRNLGHR_	REV__ENSG00000198682|ENST00000456849|PAPSS2;REV__nc|ENSG00000198682|O95340|PAPSS2	33.51558372728122	0.7005509609380386	4				NaN	NaN	0	NaN	11124	3914	15039
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15041	38.347	NaN	4504.9	30	0	336.31	0.106			+	-1	IAFALDMASF	10	74	551.2670342123943	1100.5195154915884	2	551.268798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_IAFALDM(Oxidation (M))ASF_	REV__ENSG00000104517|ENST00000520539|UBR5;REV__nc|ENSG00000104517|O95071-2|UBR5	63.30626980617807	0.33577009411590547	4				NaN	NaN	0	NaN	11125	3914	15039
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15042	38.349	NaN	2683.6	30	0	228.69	0.106	+			29328	NYRQQKGW	8	77	540.274809259425	1078.5350655856498	2	540.278564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NYRQQKGW_	ENSG00000179134|ENST00000610417|SAMD4B;ENST00000595476.1_1_19:39869154-39871842:+|nuORF	42.47446043378293	0.6409579893742323	4				NaN	NaN	0	NaN	11126	3914	15039
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15043	38.351	NaN	1778.2	30	0	190.12	0.106			+	19695	KDRPGPPQLK	10	60	568.3338619875328	1134.6531710418656	2	568.3345336914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KDRPGPPQLK_	REV__ENST00000565652.1_1_15:75660495-75660924:-|nuORF	22.579656572578934	0.6954366826851017	4				NaN	NaN	0	NaN	11127	3914	15039
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15044	38.353	NaN	2458.2	30	0	215.23	0.106			+	51316	YSIAGSAAFL	10	63	500.26035192089836	998.5061509085967	2	500.2607116699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YSIAGSAAFL_	REV__ENSG00000179168|ENST00000334928|GGN;REV__GGN|p.A569Pfs*47|1|0.5|ENSG00000179168|chr19:38385557-38385557|C/-|frameshift_variant;REV__nc|ENSG00000179168|Q86UU5-2|GGN	47.657333605630114	0.47858658696240314	4				NaN	NaN	0	NaN	11128	3914	15039
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15045	38.355	NaN	4324.1	30	0	423.31	0.106	+			50866	YFAERVTSL	9	74	543.284379131548	1084.554205329896	2	543.2849731445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YFAERVTSL_	ENSG00000213145|ENST00000392531|CRIP1	117.81106730687013	0.02252488733980868	4				NaN	NaN	0	NaN	11129	3914	15039
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15046	38.357	NaN	2320.1	30	0	136.32	0.034	+			24847	LKATYIQN	8	64	475.76786932040807	949.5211857076162	2	475.7685241699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LKATYIQN_	CTBS|p.R347H|1|0.29|ENSG00000117151|chr1:84555117-84555117|C/T|missense_variant;ENSG00000117151|ENST00000370630|CTBS	37.15910966729921	0.6739408393984688	4				NaN	NaN	0	NaN	11130	3914	15039
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15052	38.371	NaN	7860.1	30	0	975.42	0.214				-1	 	0	72	507.2516082063302	1012.4886634794605	2	507.2521057128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11133	3917	15051
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15053	38.374	NaN	11216	30	0	1408.8	0.106	+			28103	NAFKEITTM	9	81	527.7644937473851	1053.5144345615702	2	527.7658081054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NAFKEITTM_	ENSG00000137947|ENST00000370500|GTF2B;ENST00000486078.1_1_1:89325774-89329699:-|nuORF;ENST00000494819.5_1_1:89324456-89357188:-|nuORF	167.22876102047192	0.0032399547248545047	4				NaN	NaN	0	NaN	11134	3917	15051
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15054	38.376	NaN	6147.9	30	0	3195.2	0.106				-1	 	0	52	372.21290290083545	1113.6168793027064	3	372.213134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11135	3917	15051
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15055	38.378	NaN	5479.4	30	0	720.41	0.106	+			1826	AIIDHIFASK	10	74	557.8156060746957	1113.6166592161912	2	557.8164672851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AIIDHIFASK_	ENSG00000152332|ENST00000489294|UHMK1;nc|ENSG00000152332|Q8TAS1-2|UHMK1;nc|ENSG00000152332|Q8TAS1-3|UHMK1	96.0336014099291	0.09653029772959643	4				NaN	NaN	0	NaN	11136	3917	15051
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15056	38.38	NaN	4084.3	30	0	357.6	0.106			+	26163	LSQTNLVLV	9	67	493.7971607263606	985.5797685195212	2	493.79736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSQTNLVLV_	REV__ENSG00000126838|ENST00000261336|PZP	44.377184641726394	0.36891676396732553	4				NaN	NaN	0	NaN	11137	3917	15051
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15057	38.382	NaN	7038.6	30	0	826.35	0.106	+			13430	GLGTDDNTLI	10	75	509.7550097276583	NaN	0	509.75543212890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GLGTDDNTLI_	ENSG00000196975|ENST00000394295|ANXA4;ENST00000471395.1_1_2:70045687-70052644:+|nuORF;ENST00000477632.5_1_2:70037634-70052644:+|nuORF;nc|ENSG00000196975|P09525-2|ANXA4;nc|ENSG00000196975|P09525|ANXA4	56.43379154798735	0.2634004003759929	4				NaN	NaN	0	NaN	11138	3917	15051
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15058	38.383	NaN	2057.5	30	0	220.72	0.034			+	46707	VGLLSGTLC	9	58	460.24904373144983	918.4835345296997	2	461.2554626464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_VGLLSGTLC(Carbamidomethyl (C))_	REV__ENST00000427841.5_1_3:195694776-195701406:-|nuORF;REV__ENST00000503674.5_1_5:250762-256532:+|nuORF	42.47446043378293	0.39123495718708534	4				NaN	NaN	0	NaN	11139	3917	15051
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15062	38.398	NaN	35559	30	0	4099	0.213			+	26370	LTCSERGAVTY	11	86	600.2895397580315	1198.564526582863	2	600.2901611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LTCSERGAVTY_	REV__CON__Q29RQ1	70.8162118820467	0.22893521292419713	4				NaN	NaN	0	NaN	11140	3920	15061
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15063	38.401	NaN	20328	30	0	3703.7	0.106	+			15205	GTSSLFIYK	9	76	508.2764658947913	1014.5383788563826	2	508.2781677246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTSSLFIYK_	BBS10|p.K620Nfs*12|1|0.5|ENSG00000179941|chr12:76346125-76346125|T/-|frameshift_variant;ENSG00000179941|ENST00000650064|BBS10	71.87747018426188	0.13267044672804276	4				NaN	NaN	0	NaN	11141	3920	15061
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15064	38.403	NaN	5144.5	30	0	661.53	0.106	+			6118	AVNSIFLSH	9	72	494.26587531063973	NaN	0	494.26580810546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVNSIFLSH_	ENSG00000123146|ENST00000242786|ADGRE5;nc|ENSG00000123146|P48960-2|ADGRE5;nc|ENSG00000123146|P48960-3|ADGRE5	72.87924865735499	0.09578366712754152	4				NaN	NaN	0	NaN	11142	3920	15061
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15065	38.405	NaN	2717.5	30	0	336.74	0.106			+	30477	QAEMNSLLK	9	59	517.2686775571243	1032.5228021810485	2	517.27001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QAEMNSLLK_	REV__ENSG00000144674|ENST00000361924|GOLGA4;REV__nc|ENSG00000144674|Q13439-3|GOLGA4;REV__nc|ENSG00000144674|Q13439-4|GOLGA4;REV__nc|ENSG00000144674|Q13439-5|GOLGA4	35.61828744233558	0.47037581924408073	4				NaN	NaN	0	NaN	11143	3920	15061
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15066	38.407	NaN	3224.3	30	0	223.46	0.106	+			48573	VTQDFMMYR	9	75	595.7694120361904	1189.5242711391807	2	596.2717895507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTQDFMMYR_	CTSH|p.N292Mfs*8|1|0.31|ENSG00000103811|chr15:78923050-78923050|T/-|frameshift_variant;ENSG00000103811|ENST00000220166|CTSH;ENST00000527715.5_1_15:79214474-79217794:-|nuORF;ENST00000533777.5_1_15:79214474-79223953:-|nuORF;ENST00000534237.5_1_15:79214474-79224366:-|nuORF	109.47833844074708	0.029530294723441826	4				NaN	NaN	0	NaN	11144	3920	15061
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15067	38.408	NaN	2752.5	30	0	328.01	0.106	+			1347	AETVLNQM	8	54	453.2230193675168	904.4314858018337	2	453.2229309082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AETVLNQM_	ENSG00000214753|ENST00000301785|HNRNPUL2	76.7741389293348	0.3504530765139327	4				NaN	NaN	0	NaN	11145	3920	15061
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15068	38.41	NaN	1734.8	30	0	106.02	0.038	+			9903	EQPETYYKW	9	71	622.2843024776713	1242.5540520221425	2	622.7860717773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EQPETYYKW_	ENSG00000164880|ENST00000404767|INTS1;INTS1|p.R843Pfs*31|1|0.39|ENSG00000164880|chr7:1487438-1487439|-/G|frameshift_variant	45.97224482568171	0.3502073465782774	4				NaN	NaN	0	NaN	11146	3920	15061
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15076	38.428	NaN	3644.2	30	0	395.51	0.214			+	45013	TVFATEKI	8	66	454.7575938751559	907.5006348171119	2	454.75775146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVFATEKI_	REV__ENSG00000101333|ENST00000378473|PLCB4;REV__ENST00000464199.5_1_20:9351789-9459633:+|nuORF;REV__ENST00000492632.5_1_20:9288449-9449247:+|nuORF;REV__nc|ENSG00000101333|Q15147-2|PLCB4;REV__nc|ENSG00000101333|Q15147-4|PLCB4;REV__nc|ENSG00000101333|Q15147-5|PLCB4;REV__nc|ENSG00000101333|Q15147|PLCB4;REV__PLCB4|p.E494Rfs*4|1|0.26|ENSG00000101333|chr20:9395586-9395587|-/A|frameshift_variant;REV__PLCB4|p.P887Lfs*31|1|0.08|ENSG00000101333|chr20:9437081-9437081|C/-|frameshift_variant	84.9155231211612	0.2928622555056503	4				NaN	NaN	0	NaN	11151	3923	15075
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15077	38.432	NaN	5237.4	30	0	1111	0.106	+			28397	NENSNIQVL	9	65	515.7614836175651	1029.50841430193	2	515.7621459960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NENSNIQVL_	ENSG00000145216|ENST00000337488|FIP1L1;ENST00000505125.5_1_4:54245288-54325613:+|nuORF;ENST00000513008.5_1_4:54292015-54325613:+|nuORF;ENST00000513975.5_1_4:54244032-54306933:+|nuORF;FIP1L1|p.A332E|1|0.06|ENSG00000145216|chr4:53425943-53425943|C/A|missense_variant;FIP1L1|p.D472Efs*3|1|0.45|ENSG00000145216|chr4:53453049-53453050|-/G|frameshift_variant;FIP1L1|p.R473Lfs*2|1|0.5|ENSG00000145216|chr4:53453051-53453052|-/T|frameshift_variant;nc|ENSG00000145216|Q6UN15-3|FIP1L1;nc|ENSG00000145216|Q6UN15-4|FIP1L1;nc|ENSG00000145216|Q6UN15-5|FIP1L1	65.46538089061403	0.16805504838372562	4				NaN	NaN	0	NaN	11152	3923	15075
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15078	38.434	NaN	7834	30	0	670.6	0.106	+			23267	KYKGIFNGF	9	75	537.2918157082829	1072.5690784833657	2	537.2918701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KYKGIFNGF_	ENSG00000075415|ENST00000552981|SLC25A3;ENST00000546766.5_1_12:98989476-98995303:+|nuORF;ENST00000547908.1_1_12:98989476-98991822:+|nuORF;ENST00000551123.5_1_12:98989412-98995303:+|nuORF;nc|ENSG00000075415|Q00325|SLC25A3;SLC25A3|p.A215Hfs*11|1|0.42|ENSG00000075415|chr12:98598698-98598698|A/-|frameshift_variant	82.30502934623384	0.08758161712619916	4				NaN	NaN	0	NaN	11153	3923	15075
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15079	38.435	NaN	4042.7	30	0	536.95	0.106			+	37260	SLAAVPAPGAV	11	65	476.776301338876	951.538049744552	2	476.7760314941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLAAVPAPGAV_	REV__ENST00000441394.1_1_13:30880936-30881176:-|nuORF	56.72105179125745	0.35272424613657194	4				NaN	NaN	0	NaN	11154	3923	15075
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15080	38.437	NaN	3195.7	30	0	423.07	0.106	+			14929	GTMEWIMIK	9	69	570.7735238370217	1139.5324947408433	2	571.2772216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Oxidation (M)	_GTM(Oxidation (M))EWIM(Oxidation (M))IK_	ENSG00000168273|ENST00000477703|UQCC5	62.107414245175825	0.1960472003779324	4				NaN	NaN	0	NaN	11155	3923	15075
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15081	38.439	NaN	1681.5	30	0	204.77	0.106	+			31927	QQPLQQGGDY	10	68	567.2675614320132	NaN	0	567.2681274414062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QQPLQQGGDY_	ENSG00000125944|ENST00000302271|HNRNPR;nc|ENSG00000125944|O43390-2|HNRNPR;nc|ENSG00000125944|O43390-3|HNRNPR;nc|ENSG00000125944|O43390-4|HNRNPR	58.22992032128504	0.24873293749302264	4				NaN	NaN	0	NaN	11156	3923	15075
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15082	38.441	NaN	2356.4	30	0	166.74	0.035			+	10941	FDTKRLGLV	9	64	524.8121337890625	NaN	0	524.8121337890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FDTKRLGLV_	REV__ENSG00000160505|ENST00000301295|NLRP4;REV__nc|ENSG00000160505|Q96MN2-2|NLRP4;REV__nc|ENSG00000160505|Q96MN2-3|NLRP4	44.377184641726394	0.24544280798894275	4				NaN	NaN	0	NaN	11157	3923	15075
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15087	38.455	NaN	6965.9	30	0	1192.9	0.215	+			44300	TSAYGALSLI	10	76	498.2732379006653	994.5319228681307	2	498.2733459472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSAYGALSLI_	ENSG00000132669|ENST00000255006|RIN2;nc|ENSG00000132669|Q8WYP3-2|RIN2;RIN2|p.D879Gfs*3|1|0.16|ENSG00000132669|chr20:20000731-20000732|-/G|frameshift_variant	82.24051045832904	0.17731618517892733	4				NaN	NaN	0	NaN	11159	3926	15086
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15088	38.459	NaN	9364.3	30	0	2367.7	0.106	+			12002	FVTQPVRVL	9	77	529.8210445896586	1057.6275362461172	2	529.8220825195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FVTQPVRVL_	ENST00000368547.3_1_10:135176069-135176375:-|nuORF	21.9598887501803	0.5980208138527809	4				NaN	NaN	0	NaN	11160	3926	15086
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15089	38.46	NaN	3892.2	30	0	696.03	0.106	+			17503	IDFTGHAL	8	58	437.2265644148856	872.4385758965713	2	437.2268981933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IDFTGHAL_	ENSG00000057608|ENST00000380191|GDI2;ENSG00000203879|ENST00000447750|GDI1;ENST00000491154.1_1_X:153666748-153668487:+|nuORF;GDI2|p.S222Afs*20|1|0.1|ENSG00000057608|chr10:5785197-5785197|T/-|frameshift_variant;nc|ENSG00000057608|P50395-2|GDI2	68.484700416344	0.4195245774506064	4				NaN	NaN	0	NaN	11161	3926	15086
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15090	38.462	NaN	4135.6	30	0	490.69	0.106				-1	LKIMAMNSAM	10	72	563.277249837067	1124.5399467409338	2	563.7822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_LKIMAM(Oxidation (M))NSAM_	ENSG00000112159|ENST00000369393|MDN1;MDN1|p.E2692*|2|0.32|ENSG00000112159|chr6:89706133-89706134|-/A|frameshift_variant;MDN1|p.F2691Lfs*7|2|0.37|ENSG00000112159|chr6:89706134-89706134|A/-|frameshift_variant;MDN1|p.K2642Nfs*17|2|0.29|ENSG00000112159|chr6:89707449-89707449|T/-|frameshift_variant;MDN1|p.L4077Cfs*15|1|0.16|ENSG00000112159|chr6:89680625-89680625|G/-|frameshift_variant;MDN1|p.L5278Ffs*6|1|0.18|ENSG00000112159|chr6:89652273-89652274|-/A|frameshift_variant	42.86426827375447	0.522752283233888	4				NaN	NaN	0	NaN	11162	3926	15086
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15091	38.464	NaN	6568.2	30	0	1443.9	0.106			+	50354	WVLGVAGVAG	10	63	464.7657749792754	927.5169970253509	2	464.7655334472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_WVLGVAGVAG_	REV__ENSG00000127540|ENST00000591899|UQCR11;REV__ENST00000593029.1_1_19:1599441-1602348:-|nuORF	26.79610172149135	0.6610034878437611	4				NaN	NaN	0	NaN	11163	3926	15086
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15092	38.466	NaN	4015.7	30	0	633.29	0.106	+			38778	SSMDTTLILK	10	70	554.8009705036744	NaN	0	554.8004760742188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSMDTTLILK_	CEP170|p.V1192Yfs*26|1|0.1|ENSG00000143702|chr1:243164387-243164387|T/-|frameshift_variant;ENSG00000143702|ENST00000366542|CEP170;ENST00000502249.6_1_4:119435248-119475252:+|nuORF;nc|ENSG00000143702|Q5SW79-2|CEP170;nc|ENSG00000143702|Q5SW79-3|CEP170	88.17693792209575	0.06076230397739847	4				NaN	NaN	0	NaN	11164	3926	15086
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15093	38.468	NaN	3693.8	30	0	264.38	0.034	+			41235	SVLGGLWAIG	10	71	486.7806509461625	971.546748959125	2	486.780517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVLGGLWAIG_	TRIM60|p.F385L|1|0.43|ENSG00000176979|chr4:165041227-165041227|C/A|missense_variant	63.30626980617807	0.33577009411590547	4				NaN	NaN	0	NaN	11165	3926	15086
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15101	38.487	NaN	29575	30	0	4202.8	0.214	+			3219	ASLADIMAK	9	83	460.24904373144983	918.4835345296997	2	460.2491455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASLADIMAK_	ENSG00000114391|ENST00000394077|RPL24;ENST00000446071.1_1_9:72832122-72832404:+|nuORF	162.25246889848123	0.0040893836092247005	4				NaN	NaN	0	NaN	11170	3929	15100
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15102	38.491	NaN	16249	30	0	3198.7	0.106	+			19076	IYIAGHPAF	9	76	494.7654565157134	987.5163600982269	2	494.76617431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IYIAGHPAF_	ENSG00000104824|ENST00000221419|HNRNPL;ENST00000568980.1_1_15:34781792-34782686:-|nuORF;HNRNPL|p.P337Hfs*58|9|0.35|ENSG00000104824|chr19:38840319-38840319|G/-|frameshift_variant;HNRNPL|p.P338Tfs*56|1|0.23|ENSG00000104824|chr19:38840318-38840319|-/G|frameshift_variant;nc|ENSG00000104824|P14866-2|HNRNPL	100.36016987692139	0.038834373944719155	4				NaN	NaN	0	NaN	11171	3929	15100
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15103	38.492	NaN	5996	30	0	1189.5	0.106	+			15849	GWVMLHLW	8	72	521.2710731111079	1040.5275932890156	2	521.2720336914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GWVMLHLW_	ENST00000583334.5_3_17:30666835-30668280:-|nuORF	43.626045697637714	0.6338121648150432	4				NaN	NaN	0	NaN	11172	3929	15100
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15104	38.494	NaN	6424.8	30	0	975.49	0.106				-1	 	0	73	537.268170749499	1072.5217885657978	2	537.2688598632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11173	3929	15100
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15105	38.496	NaN	4283.8	30	0	338.67	0.106			+	-1	LVIKKMEE	8	72	503.286683105463	1004.558813277726	2	503.2873229980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_LVIKKM(Oxidation (M))EE_	REV__ENSG00000115524|ENST00000335508|SF3B1;REV__SF3B1|p.F815Lfs*19|1|0.14|ENSG00000115524|chr2:197401451-197401451|A/-|frameshift_variant	47.91560031466742	0.6071945918984287	4				NaN	NaN	0	NaN	11174	3929	15100
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15106	38.498	NaN	5348.3	30	0	481.25	0.036	+			18658	ISVGIYSLVQ	10	79	539.8105818027652	1077.6066106723304	2	539.8101196289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ISVGIYSLVQ_	ENST00000435236.2_1_X:98974480-98975440:-|nuORF	57.148748479083515	0.39177200545522445	4				NaN	NaN	0	NaN	11175	3929	15100
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15107	38.499	NaN	3195.9	30	0	411.26	0.14			+	12103	GADGKLGPVLI	11	65	520.3104036141374	1038.6062542950747	2	520.3109130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GADGKLGPVLI_	REV__ENSG00000118004|ENST00000349077|COLEC11;REV__ENST00000236693.11_1_2:3651915-3673629:+|nuORF;REV__nc|ENSG00000118004|Q9BWP8-10|COLEC11;REV__nc|ENSG00000118004|Q9BWP8-3|COLEC11	29.170058357718403	0.683821074385409	4				NaN	NaN	0	NaN	11176	3929	15100
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15113	38.515	NaN	43960	30	0	7934.7	0.214	+			12733	GEKVDFNTF	9	103	528.7535749793655	1055.4925970255308	2	528.7545776367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEKVDFNTF_	ENSG00000176153|ENST00000389614|GPX2;GPX2|p.W152*|1|0.31|ENSG00000176153|chr14:64939605-64939605|C/-|frameshift_variant	114.8945686534367	0.024290463251177924	4				NaN	NaN	0	NaN	11179	3932	15112
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15114	38.518	NaN	7620.3	30	0	2413.8	0.106	+			12240	GASLADIMAK	10	64	488.7598465715943	975.5051402099887	2	488.76031494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GASLADIMAK_	ENSG00000114391|ENST00000394077|RPL24;ENST00000446071.1_1_9:72832122-72832404:+|nuORF	112.10723106719422	0.0417416748461292	4				NaN	NaN	0	NaN	11180	3932	15112
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15115	38.52	NaN	6029	30	0	571.89	0.106	+			11257	FIMDRAQAL	9	74	532.7802365955628	1063.5459202579254	2	532.7816162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FIMDRAQAL_	ENSG00000105576|ENST00000425528|TNPO2;ENST00000588484.1_1_19:12826020-12830096:-|nuORF;nc|ENSG00000105576|O14787-2|TNPO2;TNPO2|p.H347Pfs*4|1|0.35|ENSG00000105576|chr19:12711373-12711374|-/G|frameshift_variant	63.53385203322761	0.18415635464017938	4				NaN	NaN	0	NaN	11181	3932	15112
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15116	38.522	NaN	6252.1	30	0	500.56	0.106	+			14778	GTLAEFIQK	9	78	503.78154771680704	1005.5485425004141	2	503.7830505371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTLAEFIQK_	ENSG00000160602|ENST00000268766|NEK8;ENST00000584342.5_1_17:27052953-27062286:+|nuORF;ENST00000593261.1_1_17:27055855-27062286:+|nuORF	68.84614121027924	0.14577793175421136	4				NaN	NaN	0	NaN	11182	3932	15112
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15117	38.524	NaN	4349.6	30	0	842.16	0.106	+			35965	SEGTFGIHV	9	64	473.73456038208525	945.4545678309705	2	473.7353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SEGTFGIHV_	ENSG00000088888|ENST00000428216|MAVS;nc|ENSG00000088888|Q7Z434-4|MAVS	123.9887779854562	0.018785054595953452	4				NaN	NaN	0	NaN	11183	3932	15112
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15118	38.526	NaN	4796.3	30	0	307.37	0.106	+			49939	VYVQHPITF	9	84	552.2976647636686	1102.5807765941372	2	552.2984008789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VYVQHPITF_	ENSG00000189067|ENST00000622633|LITAF;nc|ENSG00000189067|Q99732-2|LITAF;nc|ENSG00000189067|Q99732-3|LITAF	98.58198989935565	0.04066992115528678	4				NaN	NaN	0	NaN	11184	3932	15112
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15119	38.528	NaN	1390.4	30	0	123.15	0.033	+			10251	ETLALTKL	8	54	444.77323421859404	887.5319155039881	2	444.7734069824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ETLALTKL_	ENSG00000080345|ENST00000444746|RIF1;nc|ENSG00000080345|Q5UIP0-2|RIF1;RIF1|p.E1442Gfs*4|1|0.39|ENSG00000080345|chr2:151463835-151463836|-/A|frameshift_variant;RIF1|p.K1441Rfs*18|1|0.2|ENSG00000080345|chr2:151463836-151463836|A/-|frameshift_variant;RIF1|p.K1505Rfs*18|3|0.3|ENSG00000080345|chr2:151464027-151464027|A/-|frameshift_variant;RIF1|p.S472Ffs*13|1|0.23|ENSG00000080345|chr2:151437275-151437276|-/T|frameshift_variant;RIF1|p.S472Pfs*34|1|0.3|ENSG00000080345|chr2:151437276-151437276|T/-|frameshift_variant;RIF1|p.S692Ffs*15|1|0.43|ENSG00000080345|chr2:151445419-151445420|-/T|frameshift_variant;RIF1|p.S692Qfs*10|1|0.13|ENSG00000080345|chr2:151445420-151445420|T/-|frameshift_variant	63.30626980617807	0.4690498839812213	4				NaN	NaN	0	NaN	11185	3932	15112
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15128	38.549	NaN	9150.2	30	0	1397.4	0.214	+			49497	VVYVGGILTK	10	75	524.8230650997835	1047.631577266367	2	524.8243408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVYVGGILTK_	ENSG00000174607|ENST00000310836|UGT8	85.16082228582465	0.15877915086237185	4				NaN	NaN	0	NaN	11191	3935	15127
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15129	38.553	NaN	2861	30	0	605.62	0.106				-1	 	0	40	336.53376577116956	1006.5794679137086	3	336.5343322753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11192	3935	15127
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15130	38.555	NaN	2351.3	30	0	195.28	0.106	+			26214	LSSHPLAI	8	56	419.24472201952244	836.4748911058449	2	419.2447814941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSSHPLAI_	ENST00000527662.5_1_1:201453843-201459740:-|nuORF;ENST00000533402.5_1_1:201459302-201459740:-|nuORF	62.97842346883844	0.4722955155785405	4				NaN	NaN	0	NaN	11193	3935	15127
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15131	38.556	NaN	2550.8	30	0	365.74	0.106	+			8986	EFPTSISACLS	11	71	577.7718208150039	1153.5290886968078	2	577.7720947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EFPTSISACLS_	ENST00000354234.8_1_13:50018777-50018888:+|nuORF	34.08650109265054	0.6322515996262609	4				NaN	NaN	0	NaN	11194	3935	15127
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15132	38.558	NaN	2514.1	30	0	324.63	0.106			+	20337	KERKGQRKM	9	65	580.838567410089	1159.662581886978	2	580.8391723632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KERKGQRKM_	REV__ENSG00000198855|ENST00000552695|FICD;REV__ENST00000361549.2_1_12:108912031-108913249:+|nuORF	28.081489160057373	0.5408112046645406	4				NaN	NaN	0	NaN	11195	3935	15127
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15133	38.56	NaN	1770.8	30	0	292	0.106	+			27808	MSGSPMKR	8	58	447.22157123179517	NaN	0	447.2218017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MSGSPMKR_	ENST00000367240.6_1_1:203029522-203032974:+|nuORF	37.15910966729921	1.7418937515398478	4				NaN	NaN	0	NaN	11196	3935	15127
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15134	38.562	NaN	3036.7	30	0	310.62	0.036			+	-1	PMLPGWRNL	9	71	550.2895649817186	1098.5645770302372	2	549.7892456054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_PM(Oxidation (M))LPGWRNL_	REV__ENSG00000172073|ENST00000303254|TEX37	60.29395666154354	0.21116425950210296	4				NaN	NaN	0	NaN	11197	3935	15127
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15142	38.58	NaN	15533	30	0	1325.5	0.214	+			11944	FVIETARQL	9	75	538.8077312188567	1075.6009095045133	2	538.8089599609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FVIETARQL_	ENSG00000119669|ENST00000238647|IRF2BPL;ENSG00000168264|ENST00000366609|IRF2BP2;IRF2BP2|p.K554Nfs*26|1|0.21|ENSG00000168264|chr1:234607239-234607239|T/-|frameshift_variant;IRF2BPL|p.G195Afs*17|1|0.33|ENSG00000119669|chr14:77027209-77027209|C/-|frameshift_variant;IRF2BPL|p.G244Vfs*101|1|0.32|ENSG00000119669|chr14:77027062-77027062|C/-|frameshift_variant;IRF2BPL|p.L713Sfs*54|1|0.54|ENSG00000119669|chr14:77025656-77025656|G/-|frameshift_variant;nc|ENSG00000168264|Q7Z5L9-2|IRF2BP2	155.5846463517096	0.005567437401040498	4				NaN	NaN	0	NaN	11202	3938	15141
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15143	38.583	NaN	4726.5	30	0	468.76	0.106	+			18454	ISEENFRVM	9	76	562.774292921996	NaN	0	562.7744750976562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ISEENFRVM_	ENSG00000138160|ENST00000260731|KIF11;KIF11|p.K673Rfs*3|1|0.12|ENSG00000138160|chr10:92637397-92637397|A/-|frameshift_variant	96.0336014099291	0.029433397039169355	4				NaN	NaN	0	NaN	11203	3938	15141
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15144	38.585	NaN	4114.4	30	0	314.21	0.106	+			46339	VEKLGAYEL	9	75	511.2810684372089	1020.5475839412178	2	511.2824401855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VEKLGAYEL_	ARID5A|p.R213Gfs*55|1|0.21|ENSG00000196843|chr2:96551159-96551159|C/-|frameshift_variant;ENSG00000196843|ENST00000357485|ARID5A;ENST00000467498.5_1_2:97215494-97216349:+|nuORF;nc|ENSG00000196843|Q03989-5|ARID5A	58.22992032128504	0.22837015374068087	4				NaN	NaN	0	NaN	11204	3938	15141
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15145	38.587	NaN	1890.2	30	0	99.441	0.106	+			15870	GYLADPAKF	9	62	491.2551610006551	980.4957690681102	2	491.2552185058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GYLADPAKF_	ENSG00000137547|ENST00000260102|MRPL15	66.42927471994793	0.16001998865088202	4				NaN	NaN	0	NaN	11205	3938	15141
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15146	38.589	NaN	3094.6	30	0	592.93	0.106				-1	VERKGKQIC	9	52	373.2094180452962	1116.6064247360887	3	373.21038818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_VERKGKQIC(Carbamidomethyl (C))_	ENSG00000144161|ENST00000409573|ZC3H8	19.1035232394073	0.6112419832031293	4				NaN	NaN	0	NaN	11206	3938	15141
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15147	38.59	NaN	1705.2	30	0	131.34	0.106			+	32360	QVAAVTFAQKL	11	69	588.3418328151653	1174.6691126971305	2	588.3431396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QVAAVTFAQKL_	REV__ENSG00000065882|ENST00000698857|TBC1D1;REV__nc|ENSG00000065882|Q86TI0-2|TBC1D1;REV__nc|ENSG00000065882|Q86TI0|TBC1D1;REV__TBC1D1|p.E431*|1|0.43|ENSG00000065882|chr4:38027862-38027863|-/T|frameshift_variant;REV__TBC1D1|p.N498Tfs*7|1|0.48|ENSG00000065882|chr4:38044437-38044437|A/-|frameshift_variant;REV__TBC1D1|p.V628Efs*7|1|0.41|ENSG00000065882|chr4:38049869-38049870|AG/-|frameshift_variant	61.691277971877994	0.30835813808799384	4				NaN	NaN	0	NaN	11207	3938	15141
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15148	38.592	NaN	2277.9	30	0	338.84	0.036				-1	 	0	38	351.2009348628988	1050.5809751888964	3	351.2018737792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11208	3938	15141
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15153	38.606	NaN	15915	30	0	1401.7	0.214	+			10624	EYNNNFHVL	9	74	575.2691996784126	1148.5238464236252	2	575.2698364257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EYNNNFHVL_	ENSG00000151151|ENST00000373935|IPMK;ENST00000425988.1_1_13:23411483-23411888:-|nuORF	138.24224950522367	0.011304696901763419	4				NaN	NaN	0	NaN	11210	3941	15152
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15154	38.609	NaN	5568.6	30	0	704.87	0.106			+	51068	YLLNQLQL	8	66	502.79162092225107	1003.5686889113022	2	502.7922668457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YLLNQLQL_	REV__ENSG00000100296|ENST00000490103|THOC5;REV__ENST00000475187.5_1_22:29932576-29945100:-|nuORF;REV__THOC5|p.M138Sfs*25|1|0.03|ENSG00000100296|chr22:29542898-29542898|A/-|frameshift_variant	79.9392285194092	0.32408006123154964	4				NaN	NaN	0	NaN	11211	3941	15152
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15155	38.611	NaN	5971.8	30	0	485.18	0.106			+	9568	ELGHHPRIG	9	72	508.2764658947913	1014.5383788563826	2	509.27734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ELGHHPRIG_	REV__SRRM1|p.P620Lfs*114|1|0.34|ENSG00000133226|chr1:24669238-24669238|C/-|frameshift_variant	38.80614096846853	0.43426287593479557	4				NaN	NaN	0	NaN	11212	3941	15152
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15156	38.613	NaN	4397	30	0	487.67	0.106	+			49520	VYADQPHIF	9	76	545.271055324003	1088.5275577148059	2	545.27197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VYADQPHIF_	ENSG00000100439|ENST00000428304|ABHD4	67.49366992349736	0.1516260258713357	4				NaN	NaN	0	NaN	11213	3941	15152
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15157	38.615	NaN	1879.5	30	0	319.87	0.106	+			12417	GEALGRLL	8	51	414.7503025375797	NaN	0	414.75030517578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GEALGRLL_	CON__P02070;CON__Q3SX09;ENSG00000213931|ENST00000396895|HBE1;ENSG00000223609|ENST00000650601|HBD;ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF	60.97194046774394	1.7418937515398478	4				NaN	NaN	0	NaN	11214	3941	15152
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15158	38.617	NaN	3041.4	30	0	243.65	0.106			+	-1	IVGMIELTM	9	69	511.7663382926586	1021.5181236521172	2	512.2677612304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_IVGM(Oxidation (M))IELTM_	REV__tr|U7SSR6|U7SSR6_FUSNUDNAprotectingproteinDprAOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01464PE=3SV=1	25.450171626174864	0.5654022654467333	4				NaN	NaN	0	NaN	11215	3941	15152
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15159	38.619	NaN	2541.4	30	0	497.62	0.037	+			3856	ATAMARVLRE	10	48	373.2094180452962	1116.6064247360887	3	373.2098388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATAMARVLRE_	ENSG00000140525|ENST00000310775|FANCI;nc|ENSG00000140525|Q9NVI1-1|FANCI;nc|ENSG00000140525|Q9NVI1-2|FANCI	28.081489160057373	0.6505064946289502	4				NaN	NaN	0	NaN	11216	3941	15152
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15164	38.632	NaN	15829	30	0	1476.4	0.214	+			46253	VEFNGKLLA	9	77	495.7842376806214	989.5539224280428	2	495.7843933105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VEFNGKLLA_	ENSG00000167986|ENST00000301764|DDB1;nc|ENSG00000167986|Q16531-2|DDB1	76.16968421966216	0.11411088698345859	4				NaN	NaN	0	NaN	11218	3944	15163
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15165	38.636	NaN	4220.4	30	0	292.24	0.106				-1	VLIFAAKML	9	70	511.3109822825533	1020.6074116319066	2	511.311279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_VLIFAAKM(Oxidation (M))L_	ENST00000403716.5_1_2:131906479-131906620:+|nuORF	44.53106598305862	0.36711179743858174	4				NaN	NaN	0	NaN	11219	3944	15163
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15166	38.638	NaN	1939	30	0	165.84	0.106	+			27582	MPKGMWIC	8	59	483.22473798071763	964.4349230282353	2	483.22515869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MPKGMWIC_	ENSG00000083168|ENST00000265713|KAT6A;ENSG00000156650|ENST00000287239|KAT6B;KAT6A|p.D1243Mfs*51|1|0.24|ENSG00000083168|chr8:41934493-41934493|C/-|frameshift_variant;KAT6A|p.P1694Tfs*13|1|0.25|ENSG00000083168|chr8:41933141-41933142|-/G|frameshift_variant;KAT6B|p.K962Sfs*2|1|0.13|ENSG00000156650|chr10:75021146-75021146|A/-|frameshift_variant;KAT6B|p.L1460*|1|0.36|ENSG00000156650|chr10:75029198-75029198|T/-|frameshift_variant;KAT6B|p.R1133Gfs*12|1|0.07|ENSG00000156650|chr10:75024979-75024979|A/-|frameshift_variant;KAT6B|p.S371Hfs*86|1|0.14|ENSG00000156650|chr10:74975443-74975443|G/-|frameshift_variant;nc|ENSG00000156650|Q8WYB5-2|KAT6B;nc|ENSG00000156650|Q8WYB5-3|KAT6B	46.76643321282427	0.6143254112625767	4				NaN	NaN	0	NaN	11220	3944	15163
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15167	38.64	NaN	2392.6	30	0	169.15	0.106			+	-1	MPRVHMEGG	9	72	523.23194598415	1044.4493390351	2	523.2326049804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Oxidation (M)	_M(Oxidation (M))PRVHM(Oxidation (M))EGG_	REV__ENSG00000197822|ENST00000396442|OCLN;REV__nc|ENSG00000197822|Q16625-2|OCLN;REV__nc|ENSG00000197822|Q16625-3|OCLN;REV__nc|ENSG00000197822|Q16625-6|OCLN;REV__nc|ENSG00000197822|Q16625-7|OCLN;REV__OCLN|p.L98*|1|0.36|ENSG00000197822|chr5:69509380-69509380|T/-|frameshift_variant	34.172542307311794	0.4838870758800184	4				NaN	NaN	0	NaN	11221	3944	15163
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15168	38.641	NaN	3605.7	30	0	232.03	0.106			+	51403	YTNYNNSEL	9	68	559.2436538287495	1116.472754724299	2	559.2442016601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YTNYNNSEL_	REV__ENSG00000138685|ENST00000644866|FGF2;REV__nc|ENSG00000138685|P09038-1|FGF2;REV__nc|ENSG00000138685|P09038-3|FGF2;REV__nc|ENSG00000138685|P09038|FGF2	54.776311868738084	0.25715957988447635	4				NaN	NaN	0	NaN	11222	3944	15163
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15169	38.643	NaN	2694.9	30	0	221.49	0.106	+			45650	TYSSSYEQF	9	66	556.232413273421	1110.450273613642	2	556.2337646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TYSSSYEQF_	ENSG00000135250|ENST00000393651|SRPK2;nc|ENSG00000135250|P78362|SRPK2	77.31757898189308	0.1091473830098891	4				NaN	NaN	0	NaN	11223	3944	15163
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15170	38.645	NaN	2379.8	30	0	251.38	0.033			+	42761	TDSPQAAVL	9	57	451.2343571092415	900.454161285283	2	451.2345886230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TDSPQAAVL_	REV__ENSG00000164270|ENST00000377888|HTR4;REV__nc|ENSG00000164270|Q13639-6|HTR4;REV__nc|ENSG00000164270|Q13639-8|HTR4	56.72105179125745	0.24094814563026265	4				NaN	NaN	0	NaN	11224	3944	15163
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15176	38.66	NaN	9825.2	30	0	1100.7	0.214			+	44903	TVADLFSIGGA	11	77	525.7779516142318	1049.5413502952636	2	525.7780151367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVADLFSIGGA_	REV__AASS|p.L740Ifs*13|1|0.21|ENSG00000008311|chr7:122081562-122081563|-/T|frameshift_variant;REV__AASS|p.P693Qfs*3|2|0.34|ENSG00000008311|chr7:122086120-122086120|A/-|frameshift_variant;REV__ENSG00000008311|ENST00000417368|AASS	47.227680397652996	0.4590463137409202	4				NaN	NaN	0	NaN	11227	3947	15175
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15177	38.664	NaN	9263.2	30	0	3805	0.106				-1	 	0	61	473.30203915656875	944.5895253799375	2	473.3022155761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11228	3947	15175
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15178	38.666	NaN	7163.4	30	0	790.53	0.106	+			14116	GSLNWVPVTK	10	76	550.8082207758857	1099.6018886185714	2	550.809326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GSLNWVPVTK_	ENSG00000196188|ENST00000358184|CTSE;nc|ENSG00000196188|P14091-2|CTSE;nc|ENSG00000196188|P14091-3|CTSE	110.54063921016906	0.04639402190081153	4				NaN	NaN	0	NaN	11229	3947	15175
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15179	38.668	NaN	3074.4	30	0	266.41	0.106	+			24025	LEEKTFTI	8	68	490.76822225671975	979.5218915802395	2	490.76849365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LEEKTFTI_	ENST00000336184.6_1_1:211546970-211547078:+|nuORF	56.72105179125745	0.5342425954139568	4				NaN	NaN	0	NaN	11230	3947	15175
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15180	38.669	NaN	3532.7	30	0	790.66	0.106			+	43176	TETPPRPL	8	59	455.7529155869333	909.4912782406666	2	455.7531433105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TETPPRPL_	REV__ENSG00000136378|ENST00000388820|ADAMTS7	60.97194046774394	0.49215940876911696	4				NaN	NaN	0	NaN	11231	3947	15175
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15181	38.671	NaN	2329.2	30	0	365.32	0.106	+			35344	SAPDPVSTL	9	55	443.72884650592295	885.4431400786459	2	443.7290954589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SAPDPVSTL_	ENSG00000075420|ENST00000415807|FNDC3B;FNDC3B|p.T1056Hfs*16|1|0.43|ENSG00000075420|chr3:172378419-172378420|-/C|frameshift_variant	49.44154591367651	0.3095138337212152	4				NaN	NaN	0	NaN	11232	3947	15175
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15182	38.673	NaN	1689.4	30	0	159.86	0.037	+			16418	HERSGNREAQ	10	69	592.2803315014783	1182.5461100697564	2	592.2811889648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HERSGNREAQ_	nc|ENSG00000268447|Q16385-2|SSX2	37.81151784470057	0.569310847604193	4				NaN	NaN	0	NaN	11233	3947	15175
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15189	38.689	NaN	7613.2	30	0	1637.5	0.215	+			26973	LYLDEAHSI	9	66	530.7688189534601	1059.5230849737202	2	530.7696533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LYLDEAHSI_	ENSG00000100596|ENST00000216484|SPTLC2	104.74654710444128	0.034358562718640136	4				NaN	NaN	0	NaN	11237	3950	15188
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15190	38.692	NaN	4830.4	30	0	848.31	0.106				-1	MKMVQPRTMK	10	85	641.3274638743117	1280.6403748154232	2	641.3289184570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Oxidation (M)	_M(Oxidation (M))KMVQPRTM(Oxidation (M))K_	ENSG00000180999|ENST00000367727|C1orf105	71.87747018426188	0.26198133118427214	4				NaN	NaN	0	NaN	11238	3950	15188
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15191	38.694	NaN	3154	30	0	453.82	0.106				-1	 	0	54	389.73900283760554	777.4634527420111	2	389.73895263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11239	3950	15188
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15192	38.696	NaN	3589.9	30	0	802.93	0.106			+	32875	RDGQRYLARG	10	70	596.3207830489906	1190.6270131647811	2	596.3209838867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RDGQRYLARG_	REV__ENSG00000032444|ENST00000600737|PNPLA6;REV__nc|ENSG00000032444|Q8IY17-2|PNPLA6;REV__nc|ENSG00000032444|Q8IY17-3|PNPLA6;REV__nc|ENSG00000032444|Q8IY17-5|PNPLA6;REV__nc|ENSG00000032444|Q8IY17|PNPLA6;REV__PNPLA6|p.S1175Pfs*10|1|0.55|ENSG00000032444|chr19:7558944-7558944|G/-|frameshift_variant	25.57405402267927	0.6709832231498071	4				NaN	NaN	0	NaN	11240	3950	15188
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15193	38.698	NaN	1763.3	30	0	265.17	0.106	+			48124	VSVLEGRGRK	10	47	367.5572981771373	NaN	0	367.5572814941406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSVLEGRGRK_	ENST00000561309.1_1_15:65677198-65678348:-|nuORF	35.15202426646627	0.38475398474706135	4				NaN	NaN	0	NaN	11241	3950	15188
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15194	38.7	NaN	2187.9	30	0	174.17	0.106			+	32865	RDCSTNQL	8	60	468.71361364527775	935.4126743573555	2	468.71356201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RDCSTNQL_	REV__ENSG00000146453|ENST00000392167|PNLDC1;REV__nc|ENSG00000146453|Q8NA58|PNLDC1	29.14955571784316	0.7342621283720113	4				NaN	NaN	0	NaN	11242	3950	15188
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15195	38.702	NaN	1495.6	30	0	154.3	0.038				-1	MMMTVRYGR	9	50	387.5166931152344	NaN	0	387.5166931152344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_MMM(Oxidation (M))TVRYGR_	ENST00000204566.6_1_15:65273230-65275885:-|nuORF	24.519189625965996	0.35377483217337163	4				NaN	NaN	0	NaN	11243	3950	15188
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15202	38.717	NaN	23403	30	0	5232.7	0.214				-1	 	0	70	457.27635347495595	912.5381540167119	2	457.2767333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11247	3953	15201
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15203	38.721	NaN	5644.7	30	0	622.28	0.106	+			44522	TSVGYAIFK	9	75	493.27025547098503	984.5259580087701	2	493.27130126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TSVGYAIFK_	ENSG00000055044|ENST00000264279|NOP58;ENST00000467734.5_1_2:203130664-203142690:+|nuORF;ENST00000472050.5_1_2:203130664-203149064:+|nuORF;ENST00000488403.5_1_2:203130664-203149205:+|nuORF;ENST00000492740.5_1_2:203130664-203139913:+|nuORF	101.60071028292904	0.0375685401170269	4				NaN	NaN	0	NaN	11248	3953	15201
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15204	38.723	NaN	3612.9	30	0	594.46	0.106	+			50402	YAAKDAEKI	9	65	504.7727364683855	1007.530920003571	2	504.7716064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YAAKDAEKI_	ENSG00000120733|ENST00000314358|KDM3B;nc|ENSG00000120733|Q7LBC6-2|KDM3B;nc|ENSG00000120733|Q7LBC6-3|KDM3B	45.97224482568171	0.3502073465782774	4				NaN	NaN	0	NaN	11249	3953	15201
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15205	38.725	NaN	4447.1	30	0	535.25	0.106				-1	IEMILMEK	8	75	511.7663382926586	1021.5181236521172	2	512.2681274414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_IEMILM(Oxidation (M))EK_	ENST00000452862.1_1_3:197577273-197577471:-|nuORF	33.51558372728122	0.7005509609380386	4				NaN	NaN	0	NaN	11250	3953	15201
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15206	38.727	NaN	2768.7	30	0	206.15	0.106			+	428	AATTELHHH	9	64	508.74743127066506	NaN	0	508.7476806640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AATTELHHH_	REV__AMOT|p.Q392Lfs*49|1|0.09|ENSG00000126016|chrX:112815575-112815576|-/TCCA|frameshift_variant	47.91560031466742	0.22105767942158736	4				NaN	NaN	0	NaN	11251	3953	15201
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15207	38.728	NaN	3894.3	30	0	442.01	0.106	+			45506	TYFDKNYNL	9	80	589.279231159326	1176.5439093854518	2	589.2799682617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TYFDKNYNL_	ENSG00000116641|ENST00000635253|DOCK7;ENST00000467758.1_1_1:62941350-62941566:-|nuORF;nc|ENSG00000116641|Q96N67-2|DOCK7;nc|ENSG00000116641|Q96N67-3|DOCK7;nc|ENSG00000116641|Q96N67-4|DOCK7;nc|ENSG00000116641|Q96N67-5|DOCK7;nc|ENSG00000116641|Q96N67-6|DOCK7	51.19269402634007	0.2889735674168909	4				NaN	NaN	0	NaN	11252	3953	15201
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15208	38.73	NaN	3695.4	30	0	283.13	0.034			+	37263	SLADHLPTV	9	60	476.75818254277556	951.5018121523511	2	476.7580261230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SLADHLPTV_	REV__ENSG00000133302|ENST00000265140|SLF1;REV__ENST00000493934.1_1_5:94027891-94043961:+|nuORF	44.116797842482775	0.37197099687881774	4				NaN	NaN	0	NaN	11253	3953	15201
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15212	38.744	NaN	10889	30	0	1104.1	0.213			+	23619	LAPSRGSMTTY	11	80	600.2895397580315	1198.564526582863	2	600.29052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LAPSRGSM(Oxidation (M))TTY_	REV__ENSG00000183317|ENST00000373048|EPHA10;REV__ENST00000446149.6_1_1:38181546-38201012:-|nuORF;REV__EPHA10|p.R869Gfs*10|1|0.12|ENSG00000183317|chr1:37719566-37719566|G/-|frameshift_variant;REV__nc|ENSG00000183317|Q5JZY3-3|EPHA10	63.42647028704847	0.292869158926425	4				NaN	NaN	0	NaN	11254	3956	15211
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15213	38.747	NaN	3110.5	30	0	331.69	0.106	+			12570	GEGRPLEVF	9	61	502.2637258083179	1002.5128986834358	2	502.2643127441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEGRPLEVF_	ENSG00000145555|ENST00000513610|MYO10;nc|ENSG00000145555|Q9HD67-3|MYO10	32.81241826257853	0.4965981579233955	4				NaN	NaN	0	NaN	11255	3956	15211
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15214	38.749	NaN	2836.3	30	0	363.46	0.106	+			37031	SIQTSVNAL	9	62	466.7554830865033	931.4964132398067	2	466.755615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SIQTSVNAL_	ENSG00000135624|ENST00000258091|CCT7;nc|ENSG00000135624|Q99832-2|CCT7;nc|ENSG00000135624|Q99832-3|CCT7;nc|ENSG00000135624|Q99832-4|CCT7	65.15724298150197	0.17062369902793603	4				NaN	NaN	0	NaN	11256	3956	15211
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15215	38.751	NaN	3211.1	30	0	182.7	0.106	+			49498	VVYVGGILTK	10	67	524.8230650997835	1047.631577266367	2	524.8231811523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVYVGGILTK_	ENSG00000174607|ENST00000310836|UGT8	41.42661286455405	0.5359995577334734	4				NaN	NaN	0	NaN	11257	3956	15211
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15216	38.753	NaN	1855.4	30	0	195.77	0.106			+	-1	CCCDDEHD	8	46	384.77201394948577	NaN	0	384.7723693847656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term),3 Carbamidomethyl (C)	_(Acetyl (Protein N-term))C(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))DDEHD_	REV__ENSG00000198854|ENST00000368775|C1orf68	3.4100154012096215	1.7418937515398478	4				NaN	NaN	0	NaN	11258	3956	15211
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15217	38.755	NaN	1970.2	30	0	211.52	0.106	+			23510	LAGWVAVGLE	10	66	507.7842073619961	NaN	0	507.78436279296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LAGWVAVGLE_	ENSG00000176834|ENST00000359236|VSIG10;nc|ENSG00000176834|Q8N0Z9-2|VSIG10;VSIG10|p.T110Pfs*14|1|0.13|ENSG00000176834|chr12:118095557-118095567|ACCACTGAGTC/-|frameshift_variant	38.80614096846853	0.372755673314885	4				NaN	NaN	0	NaN	11259	3956	15211
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15218	38.756	NaN	1103.8	30	0	93.553	0.034				-1	 	0	57	484.26682735704003	966.5191017808801	2	484.26666259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11260	3956	15211
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15223	38.771	NaN	7271.5	30	0	1169.1	0.214	+			17309	IAELNANLS	9	62	472.7556193879284	943.4966858426568	2	472.7557373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IAELNANLS_	DNAH17|p.K3895Nfs*2|1|0.24|ENSG00000187775|chr17:78439210-78439210|T/-|frameshift_variant;DNAH17|p.N4131Tfs*34|2|0.38|ENSG00000187775|chr17:78429136-78429136|G/-|frameshift_variant;ENSG00000187775|ENST00000389840|DNAH17;ENST00000586052.5_1_17:76450753-76471822:-|nuORF	65.46538089061403	0.16805504838372562	4				NaN	NaN	0	NaN	11262	3959	15222
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15224	38.774	NaN	4567.4	30	0	762.28	0.106			+	10153	ESSQKRMAK	9	78	532.7802365955628	1063.5459202579254	2	533.2819213867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ESSQKRMAK_	REV__ENSG00000152818|ENST00000367545|UTRN;REV__nc|ENSG00000152818|P46939-2|UTRN;REV__nc|ENSG00000152818|P46939-4|UTRN;REV__UTRN|p.G3160*|1|0.03|ENSG00000152818|chr6:144821001-144821002|AG/-|frameshift_variant;REV__UTRN|p.R3003Pfs*5|1|0.27|ENSG00000152818|chr6:144793915-144793916|-/C|frameshift_variant	42.396135135203025	0.392153681582562	4				NaN	NaN	0	NaN	11263	3959	15222
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15225	38.776	NaN	3954.9	30	0	584.32	0.106			+	25443	LPPLPPPPES	10	71	522.2901032312159	1042.5656535292317	2	522.2903442382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LPPLPPPPES_	REV__ENSG00000125492|ENST00000263610|BARHL1;REV__ENSG00000129315|ENST00000261900|CCNT1	55.50420428727701	0.4067289358710215	4				NaN	NaN	0	NaN	11264	3959	15222
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15226	38.778	NaN	2459.2	30	0	735.71	0.106	+			11074	FETFNTPA	8	60	463.71511799200533	925.4156830508107	2	463.716064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FETFNTPA_	ACTB|p.M132T|1|0.15|ENSG00000075624|chr7:5528688-5528688|A/G|missense_variant;ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196604|ENST00000409914|POTEF;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000403258.1_1_6:88986231-88986483:-|nuORF;ENST00000415776.1_1_Y:19869357-19869702:-|nuORF;ENST00000418987.2_1_9:103493819-103494230:+|nuORF;ENST00000428275.1_1_X:53172669-53172729:-|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000570019.1_1_15:34666200-34666557:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENST00000587663.1_1_18:60109485-60109668:+|nuORF;nc|ENSG00000204434|Q9BYX7|POTEKP	66.42927471994793	0.4381325844043345	4				NaN	NaN	0	NaN	11265	3959	15222
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15227	38.78	NaN	3316.6	30	0	1234.3	0.106			+	6971	CPSAWCLSL	9	63	490.2227397503555	978.430926567511	2	490.2228698730469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_CPSAWCLSL_	REV__ENST00000394361.8_1_16:57596005-57608989:+|nuORF	45.9519527083369	0.35044536499095585	4				NaN	NaN	0	NaN	11266	3959	15222
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15228	38.782	NaN	4281.7	30	0	1590.9	0.106				-1	CWGLPGHLPLL	11	70	631.8391627759436	1261.663772618687	2	631.8399658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_C(Carbamidomethyl (C))WGLPGHLPLL_	ENST00000292524.5_1_8:145747288-145748023:+|nuORF	24.20275056022122	0.7359240821686345	4				NaN	NaN	0	NaN	11267	3959	15222
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15229	38.783	NaN	1983.5	30	0	394.21	0.038			+	28476	NGDIYFIILF	10	39	405.5521680525065	NaN	0	405.5523986816406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NGDIYFIILF_	REV__ENST00000309395.6_1_4:71848345-71848474:+|nuORF	22.579656572578934	0.4201028297492154	4				NaN	NaN	0	NaN	11268	3959	15222
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15239	38.805	NaN	8309.5	30	0	646.97	0.214	+			6104	AVNMVPFPR	9	82	515.7781845402092	1029.5418161472182	2	515.7786865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVNMVPFPR_	CON__ENSEMBL:ENSBTAP00000025008;ENSG00000101162|ENST00000217133|TUBB1;ENSG00000104833|ENST00000264071|TUBB4A;ENSG00000137267|ENST00000333628|TUBB2A;ENSG00000137285|ENST00000259818|TUBB2B;ENSG00000173213|ENST00000308911|TUBB8B;ENSG00000176014|ENST00000317702|TUBB6;ENSG00000188229|ENST00000340384|TUBB4B;ENSG00000196230|ENST00000327892|TUBB;ENSG00000258947|ENST00000315491|TUBB3;ENSG00000261456|ENST00000568584|TUBB8;ENST00000290377.9_1_9:141071128-141071713:+|nuORF;ENST00000417736.2_1_18:12308439-12326126:+|nuORF;ENST00000518096.1_1_8:30210219-30210855:+|nuORF;ENST00000604929.1_1_9:140136931-140138005:+|nuORF;nc|ENSG00000258947|Q13509-2|TUBB3	82.30502934623384	0.08758161712619916	4				NaN	NaN	0	NaN	11275	3962	15238
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15240	38.809	NaN	5358.4	30	0	1006.4	0.106	+			2068	ALAPSMLKI	9	64	472.2852172882232	942.5558816432464	2	472.2853088378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ALAPSMLKI_	ENSG00000196834|ENST00000451531|POTEI	60.97194046774394	0.20551255781574032	4				NaN	NaN	0	NaN	11276	3962	15238
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15241	38.811	NaN	4605	30	0	644.85	0.106	+			1261	AESAPAWRL	9	69	500.7629128741521	999.5112728151042	2	500.7638244628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AESAPAWRL_	ENSG00000071994|ENST00000541970|PDCD2;ENST00000544336.5_2_6:170892694-170893702:-|nuORF;nc|ENSG00000071994|Q16342-2|PDCD2;nc|ENSG00000071994|Q16342-3|PDCD2;nc|ENSG00000071994|Q16342-4|PDCD2;nc|ENSG00000071994|Q16342-5|PDCD2	64.20726635412375	0.17854274437659667	4				NaN	NaN	0	NaN	11277	3962	15238
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15242	38.812	NaN	2622.5	30	0	166.66	0.035			+	-1	MILTHCIQ	8	67	508.25766909258994	NaN	0	508.2576599121094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_MILTHC(Carbamidomethyl (C))IQ_	REV__nc|ENSG00000216937|Q96M83-5|CCDC7	42.47446043378293	1.7418937515398478	4				NaN	NaN	0	NaN	11278	3962	15238
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15248	38.827	NaN	4546.1	30	0	536.17	0.213	+			49742	VYNSEYYHF	9	70	611.2637491887943	1220.5129454443886	2	611.264892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYNSEYYHF_	ENSG00000112655|ENST00000230419|PTK7;ENST00000487673.5_1_6:43111066-43128616:+|nuORF;nc|ENSG00000112655|Q13308-2|PTK7;nc|ENSG00000112655|Q13308-3|PTK7;nc|ENSG00000112655|Q13308-4|PTK7;nc|ENSG00000112655|Q13308-6|PTK7;PTK7|p.R964H|1|0.36|ENSG00000112655|chr6:43159805-43159805|G/A|missense_variant	124.08010499294276	0.018729767491916592	4				NaN	NaN	0	NaN	11281	3965	15247
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15249	38.831	NaN	3881.7	30	0	412.41	0.106			+	46820	VIDANHSLL	9	69	491.2712976174979	980.5280423017958	2	491.2712097167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VIDANHSLL_	REV__ENSG00000104321|ENST00000262209|TRPA1;REV__TRPA1|p.L1023Ffs*15|1|0.42|ENSG00000104321|chr8:72023894-72023895|-/A|frameshift_variant;REV__TRPA1|p.T673Hfs*23|1|0.45|ENSG00000104321|chr8:72046557-72046557|T/-|frameshift_variant	34.172542307311794	0.4838870758800184	4				NaN	NaN	0	NaN	11282	3965	15247
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15250	38.833	NaN	4463.3	30	0	452.56	0.034			+	20929	KKAGLAEML	9	66	480.77998047556827	959.5454080179366	2	480.7804260253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KKAGLAEML_	REV__ENSG00000143839|ENST00000272190|REN;REV__nc|ENSG00000143839|P00797-2|REN	85.35947970620816	0.07794846947388434	4				NaN	NaN	0	NaN	11283	3965	15247
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15257	38.849	NaN	11479	30	0	3166.4	0.214				-1	 	0	71	537.268170749499	1072.5217885657978	2	537.2691650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11287	3968	15256
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15258	38.853	NaN	3330.1	30	0	1233	0.106	+			46007	VAVGLLGIA	9	39	406.7650936979776	811.5156344627552	2	406.7655944824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VAVGLLGIA_	ENSG00000105854|ENST00000222572|PON2;ENST00000469716.1_1_7:95053779-95064326:-|nuORF;ENST00000469926.5_1_7:95045599-95064308:-|nuORF;ENST00000471883.1_1_7:95047556-95064326:-|nuORF;ENST00000493290.5_1_7:95063638-95064308:-|nuORF;nc|ENSG00000105854|Q15165-3|PON2;PON2|p.F65Lfs*5|1|0.33|ENSG00000105854|chr7:95416248-95416248|A/-|frameshift_variant;PON2|p.S311Rfs*5|1|0.35|ENSG00000105854|chr7:95405462-95405465|AGAT/-|frameshift_variant	49.21078951299608	0.3122205139198386	4				NaN	NaN	0	NaN	11288	3968	15256
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15259	38.854	NaN	2272.3	30	0	429.45	0.106	+			45378	TVTIFVAGV	9	58	453.7679143459978	905.5212757587956	2	453.768310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVTIFVAGV_	ENSG00000087088|ENST00000345358|BAX;ENST00000513545.5_1_19:49458896-49464890:+|nuORF;nc|ENSG00000087088|Q07812-4|BAX;nc|ENSG00000087088|Q07812-6|BAX;nc|ENSG00000087088|Q07812-7|BAX;nc|ENSG00000087088|Q07812-8|BAX	76.84663266511073	0.11118375776443899	4				NaN	NaN	0	NaN	11289	3968	15256
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15260	38.856	NaN	2349.4	30	0	340.25	0.106			+	21153	KKTSLEKN	8	61	474.280469547529	NaN	0	474.28057861328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KKTSLEKN_	REV__ENSG00000089335|ENST00000505242|ZNF302;REV__ENSG00000197841|ENST00000492450|ZNF181;REV__ENST00000509196.1_1_19:35173669-35176139:+|nuORF;REV__nc|ENSG00000197841|Q2M3W8-2|ZNF181;REV__nc|ENSG00000197841|Q2M3W8-3|ZNF181;REV__ZNF181|p.K248Sfs*36|1|0.29|ENSG00000197841|chr19:34741122-34741125|CAAA/-|frameshift_variant;REV__ZNF181|p.V107Lfs*2|1|0.15|ENSG00000197841|chr19:34740695-34740695|A/-|frameshift_variant;REV__ZNF302|p.K203Sfs*4|1|0.35|ENSG00000089335|chr19:34684508-34684508|A/-|frameshift_variant	37.15910966729921	1.7418937515398478	4				NaN	NaN	0	NaN	11290	3968	15256
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15261	38.858	NaN	2244	30	0	133.49	0.106			+	10003	ERNLPGKQF	9	70	544.794554150057	1087.574555366914	2	544.7965698242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ERNLPGKQF_	REV__ENSG00000173681|ENST00000379682|BCLAF3;REV__nc|ENSG00000173681|A2AJT9-2|BCLAF3;REV__nc|ENSG00000173681|A2AJT9-3|BCLAF3	40.77816245573522	0.41113185337114944	4				NaN	NaN	0	NaN	11291	3968	15256
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15262	38.86	NaN	2005.1	30	0	298.08	0.106			+	-1	LYVSSCSSLF	10	63	581.7749463602585	1161.5353397873168	2	581.7754516601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_LYVSSC(Carbamidomethyl (C))SSLF_	REV__ENSG00000177174|ENST00000317861|OR14C36	30.503639358989545	0.6307262373768582	4				NaN	NaN	0	NaN	11292	3968	15256
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15263	38.862	NaN	2692.9	30	0	250.92	0.034			+	30037	PPRSPLVY	8	58	464.7657749792754	927.5169970253509	2	464.7658996582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PPRSPLVY_	REV__ENST00000478776.1_1_9:2646370-2647636:+|nuORF	31.954861631926434	0.7126016770032289	4				NaN	NaN	0	NaN	11293	3968	15256
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15268	38.876	NaN	22168	30	0	2888.3	0.214				-1	 	0	84	541.7844295179335	1081.554306102667	2	541.7855224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11295	3971	15267
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15269	38.879	NaN	5393.6	30	0	744.82	0.106				-1	 	0	74	524.2857203802679	1046.5568878273357	2	524.2868041992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11296	3971	15267
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15270	38.881	NaN	2644.8	30	0	267.77	0.106				-1	FEHRSSRPM	9	50	388.1855640117295	1161.5348626353887	3	388.1856689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_FEHRSSRPM(Oxidation (M))_	GPR173|p.Y180Sfs*38|1|0.3|ENSG00000184194|chrX:53077160-53077160|A/-|frameshift_variant	26.69291269510374	0.5537881896960711	4				NaN	NaN	0	NaN	11297	3971	15267
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15271	38.883	NaN	1479.6	30	0	219.36	0.106	+			28778	NPENLATLERY	11	62	660.3316993310398	1318.6488457288795	2	660.3330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NPENLATLERY_	ENSG00000178982|ENST00000248342|EIF3K;ENST00000586932.5_1_19:39109833-39116793:+|nuORF;ENST00000593062.5_1_19:39109833-39121488:+|nuORF;nc|ENSG00000178982|Q9UBQ5-2|EIF3K	34.50088687433636	0.6279050307224145	4				NaN	NaN	0	NaN	11298	3971	15267
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15272	38.885	NaN	3140.5	30	0	271.17	0.106	+			5515	AVAGDFALINK	11	74	559.8129355264791	1117.6113181197582	2	559.8150024414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVAGDFALINK_	ATE1|p.A234Gfs*14|1|0.05|ENSG00000107669|chr10:121902505-121902506|-/T|frameshift_variant;ATE1|p.G197Vfs*3|1|0.03|ENSG00000107669|chr10:121902614-121902615|-/A|frameshift_variant;ENSG00000107669|ENST00000224652|ATE1;nc|ENSG00000107669|O95260-2|ATE1	73.90049950687481	0.20322248490973555	4				NaN	NaN	0	NaN	11299	3971	15267
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15273	38.887	NaN	2406.7	30	0	191.6	0.037				-1	LLCWALLCL	9	47	368.86937134294953	1103.5862846290486	3	368.8696594238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_LLC(Carbamidomethyl (C))WALLCL_	nc|ENSG00000211728|A0A599|TRBV5-6;nc|ENSG00000230099|A0A0C4DH59|TRBV5-4	29.14955571784316	0.5308295550522326	4				NaN	NaN	0	NaN	11300	3971	15267
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15279	38.903	NaN	6525.9	30	0	466.55	0.214				-1	 	0	82	506.27839794763935	505.27112148103936	1	506.2793273925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11303	3974	15278
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15280	38.907	NaN	2674	30	0	652.17	0.106				-1	 	0	42	336.53376577116956	1006.5794679137086	3	336.5342712402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11304	3974	15278
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15281	38.909	NaN	2785.8	30	0	303.99	0.106			+	19551	KCIGEFYSFV	10	71	596.7886308829425	1191.5627088326848	2	596.7899169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KCIGEFYSFV_	REV__ENST00000477248.1_1_1:33284219-33284375:+|nuORF	37.81151784470057	0.569310847604193	4				NaN	NaN	0	NaN	11305	3974	15278
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15282	38.91	NaN	1488.8	30	0	177.23	0.106			+	37700	SLSLVQDKLQ	10	36	377.5516662597656	NaN	0	377.5516662597656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLSLVQDKLQ_	REV__ENSG00000160299|ENST00000359568|PCNT;REV__nc|ENSG00000160299|O95613-2|PCNT;REV__PCNT|p.G2137Vfs*2|1|0.18|ENSG00000160299|chr21:46416323-46416323|G/-|frameshift_variant	27.047317107675042	0.41136583337917604	4				NaN	NaN	0	NaN	11306	3974	15278
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15283	38.912	NaN	1735.5	30	0	156.49	0.038	+			6765	CELARMYPEL	10	62	620.788776831255	1239.5630007293098	2	620.790283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_CELARM(Oxidation (M))YPEL_	ENSG00000073910|ENST00000542859|FRY;FRY|p.F2418Vfs*11|1|0.14|ENSG00000073910|chr13:32254229-32254230|-/G|frameshift_variant;FRY|p.L1623Wfs*22|1|0.44|ENSG00000073910|chr13:32224331-32224331|C/-|frameshift_variant	42.86426827375447	0.522752283233888	4				NaN	NaN	0	NaN	11307	3974	15278
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15292	38.932	NaN	4371.1	30	0	1075.3	0.214				-1	 	0	58	446.2680273511778	890.5215017691556	2	446.26824951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11313	3977	15291
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15293	38.936	NaN	9464.9	30	0	2415.3	0.106				-1	 	0	61	382.8825620947225	1145.6258568843675	3	382.8828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11314	3977	15291
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15294	38.938	NaN	4953.7	30	0	1683.1	0.106			+	17526	IDLSKAAPF	9	71	481.27082655923346	960.5271001852669	2	481.27093505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IDLSKAAPF_	REV__ENSG00000172053|ENST00000306125|QARS1;REV__ENST00000470113.2_1_3:49135784-49136686:-|nuORF;REV__nc|ENSG00000172053|P47897-2|QARS1	49.44154591367651	0.3095138337212152	4				NaN	NaN	0	NaN	11315	3977	15291
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15295	38.939	NaN	4241	30	0	632.65	0.106			+	30861	QEHYVAKLL	9	70	550.8082207758857	1099.6018886185714	2	550.8084716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QEHYVAKLL_	REV__ENSG00000015532|ENST00000017003|XYLT2;REV__nc|ENSG00000015532|Q9H1B5-2|XYLT2;REV__XYLT2|p.G529Afs*78|21|0.31|ENSG00000015532|chr17:50356606-50356606|C/-|frameshift_variant	63.53385203322761	0.18415635464017938	4				NaN	NaN	0	NaN	11316	3977	15291
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15296	38.941	NaN	3240.5	30	0	444.74	0.106	+			41900	SVVAVLVYK	9	59	489.3045979788558	976.5946430245116	2	489.3047790527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVVAVLVYK_	ENSG00000136869|ENST00000355622|TLR4;nc|ENSG00000136869|O00206-2|TLR4;nc|ENSG00000136869|O00206-3|TLR4	110.11987700582712	0.028875675806141952	4				NaN	NaN	0	NaN	11317	3977	15291
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15297	38.943	NaN	6147.4	30	0	369.68	0.106			+	1503	AFWWVAKM	8	82	527.7627642856446	1053.5109756380891	2	527.7647094726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_AFWWVAKM(Oxidation (M))_	REV__TMEM200A|p.L97Cfs*29|1|0.17|ENSG00000164484|chr6:130440710-130440710|A/-|frameshift_variant	95.37788240816951	0.26118984838711823	4				NaN	NaN	0	NaN	11318	3977	15291
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15298	38.945	NaN	4264.4	30	0	438.06	0.037	+			3262	ASLMHSFILK	10	74	573.8196751653518	1145.6247973975035	2	573.8209228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASLMHSFILK_	ENSG00000125971|ENST00000357156|DYNLRB1;ENST00000480759.1_1_20:33117938-33128425:+|nuORF	72.87924865735499	0.25379688738724415	4				NaN	NaN	0	NaN	11319	3977	15291
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15307	38.965	NaN	37991	30	0	9780.9	0.214				-1	 	0	88	536.8028947670207	1071.5912366008413	2	536.8038940429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11325	3980	15306
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15308	38.969	NaN	6808.5	30	0	1966.5	0.106	+			37210	SKISALEGLL	10	65	515.8103086481119	1029.6060643630237	2	515.8111572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SKISALEGLL_	ENSG00000162894|ENST00000367091|FCMR;nc|ENSG00000162894|O60667-2|FCMR;nc|ENSG00000162894|O60667-3|FCMR	31.068146907933308	0.6261162406294317	4				NaN	NaN	0	NaN	11326	3980	15306
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15309	38.97	NaN	3653.3	30	0	515.01	0.106	+			24419	LGAPVHLEI	9	67	474.7794637584715	NaN	0	474.7789611816406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LGAPVHLEI_	ENST00000299413.6_1_11:35832336-35832669:+|nuORF	62.97842346883844	0.13661591499337852	4				NaN	NaN	0	NaN	11327	3980	15306
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15310	38.972	NaN	3977.9	30	0	333.44	0.106	+			46417	VEQGVKFSL	9	67	503.78113735691016	1005.5477217806203	2	503.7818298339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VEQGVKFSL_	ENSG00000166557|ENST00000299705|TMED3;nc|ENSG00000166557|Q9Y3Q3-2|TMED3	68.84614121027924	0.14577793175421136	4				NaN	NaN	0	NaN	11328	3980	15306
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15311	38.974	NaN	4129.1	30	0	479.84	0.106	+			45640	TYRNVMEQF	9	72	594.2784930919034	1186.5424332506068	2	594.2796020507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TYRNVMEQF_	BAIAP2L1|p.A287Lfs*11|2|0.27|ENSG00000006453|chr7:98310542-98310542|G/-|frameshift_variant;BAIAP2L1|p.F462Lfs*34|1|0.21|ENSG00000006453|chr7:98304232-98304232|A/-|frameshift_variant;BAIAP2L1|p.N24D|1|0.22|ENSG00000006453|chr7:98362414-98362414|T/C|missense_variant;BAIAP2L1|p.N36Ifs*6|1|0.24|ENSG00000006453|chr7:98362382-98362382|C/-|frameshift_variant;BAIAP2L1|p.P436Hfs*60|4|0.39|ENSG00000006453|chr7:98304311-98304311|G/-|frameshift_variant;ENSG00000006453|ENST00000005260|BAIAP2L1;ENST00000462558.5_1_7:97937677-98030347:-|nuORF	66.96192283764107	0.15557981141143568	4				NaN	NaN	0	NaN	11329	3980	15306
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15312	38.976	NaN	8693.2	30	0	1358.4	0.106				-1	 	0	74	491.2838746188462	980.5531963044924	2	491.78607177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11330	3980	15306
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15313	38.978	NaN	3267.1	30	0	380.87	0.035			+	9321	EIEQGDRGI	9	70	508.75557656803	1015.49660020286	2	508.75555419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EIEQGDRGI_	REV__ENSG00000083896|ENST00000344157|YTHDC1;REV__ENST00000506175.1_1_4:69188417-69195784:-|nuORF;REV__nc|ENSG00000083896|Q96MU7-2|YTHDC1	56.43379154798735	0.2433427591689151	4				NaN	NaN	0	NaN	11331	3980	15306
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15322	38.998	NaN	6950.6	30	0	920.47	0.214	+			11994	FVSVLFLNQ	9	71	533.7998211301	1065.5850893269999	2	533.800537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FVSVLFLNQ_	ENST00000357308.8_1_2:69552779-69552845:-|nuORF	56.72105179125745	0.24094814563026265	4				NaN	NaN	0	NaN	11337	3983	15321
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15323	39.001	NaN	2751	30	0	265.51	0.106			+	24032	LEEVRALV	8	59	464.77667236328125	NaN	0	464.77667236328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LEEVRALV_	REV__ENSG00000174842|ENST00000370360|GLMN	51.33545320467046	1.7418937515398478	4				NaN	NaN	0	NaN	11338	3983	15321
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15324	39.003	NaN	2442.2	30	0	148.99	0.106			+	7715	DLRSPVWT	8	65	487.2581591942139	972.5017654552278	2	487.7605285644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DLRSPVWT_	REV__ENSG00000126461|ENST00000360565|SCAF1;REV__SCAF1|p.L117M|1|0.21|ENSG00000126461|chr19:49646613-49646613|C/A|missense_variant;REV__SCAF1|p.T1181Pfs*28|8|0.37|ENSG00000126461|chr19:49654785-49654785|C/-|frameshift_variant	33.51558372728122	0.7005509609380386	4				NaN	NaN	0	NaN	11339	3983	15321
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15325	39.005	NaN	3465.7	30	0	246.53	0.106				-1	 	0	74	567.2884531593073	566.2811766927073	1	567.2911987304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11340	3983	15321
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15326	39.007	NaN	1402.7	30	0	155.72	0.106	+			30385	PVPPHPGL	8	41	407.234020949101	812.4534889650021	2	407.2347106933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PVPPHPGL_	nc|ENSG00000226950|P0C864|DANCR	24.504012794735996	0.7701314986472447	4				NaN	NaN	0	NaN	11341	3983	15321
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15327	39.009	NaN	2336.7	30	0	189.95	0.036	+			17579	IEATGIAVHAL	11	68	547.8134406610083	1093.6123283888164	2	547.8143920898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IEATGIAVHAL_	ENSG00000064932|ENST00000361757|SBNO2;ENST00000592222.5_1_19:1115804-1132196:-|nuORF;nc|ENSG00000064932|Q9Y2G9-3|SBNO2	58.2462437865262	0.33910980880557884	4				NaN	NaN	0	NaN	11342	3983	15321
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15328	39.009	NaN	2037.8	30	0	167.78	0.14			+	41342	SVLVGNTVLT	10	59	501.7946016946378	NaN	0	501.79473876953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVLVGNTVLT_	REV__ENSG00000188089|ENST00000696112|PLA2G4E;REV__nc|ENSG00000188089|Q3MJ16|PLA2G4E	38.753607047826485	0.3729281687199363	4				NaN	NaN	0	NaN	11343	3983	15321
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15337	39.031	NaN	6863.1	30	0	445.86	0.214				-1	 	0	77	564.2893595106893	1126.5641660881786	2	564.2908325195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11349	3986	15336
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15338	39.035	NaN	2991.8	30	0	528.97	0.106				-1	 	0	57	459.25733198724254	916.5001110412851	2	459.257568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11350	3986	15336
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15339	39.037	NaN	2488.6	30	0	240.7	0.106			+	-1	MHVIWMTSF	9	59	584.2690776799058	1166.5236024266114	2	584.27001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))HVIWMTSF_	REV__ENST00000361479.9_1_13:20246111-20246267:+|nuORF	25.450171626174864	0.5654022654467333	4				NaN	NaN	0	NaN	11351	3986	15336
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15340	39.038	NaN	2072.1	30	0	400.44	0.106	+			27123	MAQDCSKGIY	10	63	558.2485433334103	NaN	0	558.24951171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MAQDCSKGIY_	KIF2B|p.T320M|1|0.07|ENSG00000141200|chr17:53823992-53823992|C/T|missense_variant	30.317721548370564	0.4006274431774794	4				NaN	NaN	0	NaN	11352	3986	15336
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15341	39.04	NaN	3209.6	30	0	591.83	0.106				-1	DLQLRKGCK	9	52	373.2094180452962	1116.6064247360887	3	373.2099304199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_DLQLRKGC(Carbamidomethyl (C))K_	ENSG00000172687|ENST00000683779|ZNF738;ENSG00000196268|ENST00000392288|ZNF493;ENST00000594254.1_1_19:21565732-21566473:+|nuORF;ZNF493|p.K499Nfs*51|1|0.16|ENSG00000196268|chr19:21424536-21424536|A/-|frameshift_variant	44.377184641726394	0.36891676396732553	4				NaN	NaN	0	NaN	11353	3986	15336
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15342	39.042	NaN	2014.3	30	0	292.55	0.033	+			11929	FVGLRSAL	8	52	431.76008594274	861.50561895228	2	431.76055908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FVGLRSAL_	tr|U7SK69|U7SK69_FUSNUV-typeH+-transportingATPasesubunitKOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02121PE=3SV=1	28.2542754592877	0.7411748056684583	4				NaN	NaN	0	NaN	11354	3986	15336
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15343	39.043	NaN	2091.7	30	0	156.21	0.142			+	51082	YLQLSLPHW	9	66	578.8103223580604	1155.6060917829207	2	578.8115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YLQLSLPHW_	REV__ENST00000561876.1_1_16:48671141-48672401:+|nuORF	29.14955571784316	0.5308295550522326	4				NaN	NaN	0	NaN	11355	3986	15336
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15350	39.061	NaN	17889	30	0	2060	0.214				-1	 	0	85	511.7663382926586	1021.5181236521172	2	511.7670593261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11359	3989	15349
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15351	39.064	NaN	4315.6	30	0	753.22	0.106	+			18636	ISTLQQAIL	9	60	493.79707318714605	985.5795934410921	2	493.7973327636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ISTLQQAIL_	ENSG00000130559|ENST00000389532|CAMSAP1;ENST00000483991.5_1_9:138703157-138717996:-|nuORF;nc|ENSG00000130559|Q5T5Y3-2|CAMSAP1;nc|ENSG00000130559|Q5T5Y3-3|CAMSAP1	58.22992032128504	0.22837015374068087	4				NaN	NaN	0	NaN	11360	3989	15349
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15352	39.066	NaN	5204.6	30	0	605.13	0.106	+			42079	SYFALQVGK	9	80	506.7768933274858	1011.5392337217717	2	506.7764892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SYFALQVGK_	ENSG00000085871|ENST00000265498|MGST2;ENST00000502587.1_1_4:140587164-140599797:+|nuORF;ENST00000515067.1_1_4:140587191-140608853:+|nuORF;MGST2|p.K103Nfs*8|2|0.22|ENSG00000085871|chr4:139703529-139703529|A/-|frameshift_variant;nc|ENSG00000085871|Q99735-2|MGST2	63.53385203322761	0.18415635464017938	4				NaN	NaN	0	NaN	11361	3989	15349
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15353	39.068	NaN	3499.4	30	0	536.97	0.106				-1	 	0	58	457.27635347495595	912.5381540167119	2	457.276611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11362	3989	15349
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15354	39.07	NaN	1954.1	30	0	140.48	0.106	+			932	AEILMQKL	8	53	473.2748111974831	944.5350694617662	2	473.2751159667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEILMQKL_	ENSG00000153827|ENST00000675903|TRIP12;nc|ENSG00000153827|Q14669-2|TRIP12;nc|ENSG00000153827|Q14669-3|TRIP12;nc|ENSG00000153827|Q14669-4|TRIP12;nc|ENSG00000153827|Q14669|TRIP12;TRIP12|p.H1434Afs*2|1|0.16|ENSG00000153827|chr2:229791143-229791144|-/T|frameshift_variant;TRIP12|p.S1195Lfs*24|6|0.27|ENSG00000153827|chr2:229796599-229796599|A/-|frameshift_variant;TRIP12|p.Y1552Lfs*6|1|0.12|ENSG00000153827|chr2:229787620-229787621|-/A|frameshift_variant	66.42927471994793	0.4381325844043345	4				NaN	NaN	0	NaN	11363	3989	15349
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15355	39.072	NaN	2311.3	30	0	764.68	0.106			+	-1	ETHIPREDM	9	61	572.2601424193113	1142.5057319054224	2	572.2607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_ETHIPREDM(Oxidation (M))_	REV__CDH2|p.A816T|1|0.23|ENSG00000170558|chr18:27963425-27963425|C/T|missense_variant	39.252832667884924	0.4290233611298554	4				NaN	NaN	0	NaN	11364	3989	15349
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15356	39.074	NaN	3245.3	30	0	679.01	0.035	+			10523	EVYRKTVI	8	65	504.29797921633974	NaN	0	504.2978515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EVYRKTVI_	ENSG00000117480|ENST00000243167|FAAH	42.396135135203025	1.7418937515398478	4				NaN	NaN	0	NaN	11365	3989	15349
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15363	39.09	NaN	5880.8	30	0	586.53	0.213			+	23620	LAPSRGSMTTY	11	74	600.2895397580315	1198.564526582863	2	600.2902221679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LAPSRGSM(Oxidation (M))TTY_	REV__ENSG00000183317|ENST00000373048|EPHA10;REV__ENST00000446149.6_1_1:38181546-38201012:-|nuORF;REV__EPHA10|p.R869Gfs*10|1|0.12|ENSG00000183317|chr1:37719566-37719566|G/-|frameshift_variant;REV__nc|ENSG00000183317|Q5JZY3-3|EPHA10	66.96192283764107	0.2613103798769313	4				NaN	NaN	0	NaN	11369	3992	15362
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15364	39.094	NaN	1634	30	0	170.54	0.106	+			9138	EGLRCVVL	8	58	444.7515571121221	887.4885612910442	2	444.75177001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EGLRCVVL_	ENSG00000138134|ENST00000371926|STAMBPL1;nc|ENSG00000138134|Q96FJ0-2|STAMBPL1;STAMBPL1|p.K405Rfs*21|3|0.43|ENSG00000138134|chr10:88922389-88922389|A/-|frameshift_variant	68.484700416344	0.4195245774506064	4				NaN	NaN	0	NaN	11370	3992	15362
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15365	39.096	NaN	1242.9	30	0	121.4	0.106	+			47745	VSGLSVVPV	9	43	428.7606994687307	855.5068460042614	2	428.7606506347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSGLSVVPV_	ENST00000487891.1_1_3:49020199-49020700:+|nuORF	68.484700416344	0.1473408039581241	4				NaN	NaN	0	NaN	11371	3992	15362
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15366	39.097	NaN	2893.1	30	0	647.1	0.106			+	29915	PLRPEEPLAP	10	53	373.54390587702426	NaN	0	373.5439758300781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PLRPEEPLAP_	REV__ENST00000565561.1_1_16:84853723-84872578:+|nuORF;REV__ENST00000566431.5_1_16:84853723-84896622:+|nuORF;REV__ENST00000569262.5_1_16:84853723-84906729:+|nuORF	22.579656572578934	0.4201028297492154	4				NaN	NaN	0	NaN	11372	3992	15362
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15367	39.099	NaN	3155.8	30	0	295.16	0.106	+			1823	AIGTLGIVLAN	11	73	521.3166384948568	1040.6187240565134	2	521.3184814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AIGTLGIVLAN_	tr|U7SND5|U7SND5_FUSNUNucleosidetransporter/FeoBGTPaseGatedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01804PE=4SV=1	44.377184641726394	0.49804979881800077	4				NaN	NaN	0	NaN	11373	3992	15362
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15368	39.101	NaN	2632.8	30	0	296.82	0.106				-1	 	0	57	458.7307697388806	915.4469865445612	2	458.7309875488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11374	3992	15362
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15369	39.103	NaN	2142.6	30	0	275.01	0.035	+			7240	DALKTVQAF	9	59	496.7744660365718	991.5343791399437	2	496.7742004394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DALKTVQAF_	ENSG00000134531|ENST00000256951|EMP1;nc|ENSG00000134531|P54849-2|EMP1	51.19269402634007	0.2889735674168909	4				NaN	NaN	0	NaN	11375	3992	15362
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15374	39.117	NaN	4244.6	30	0	685.81	0.214			+	7598	DIVNHATDI	9	64	499.25041009253334	996.4862672518667	2	499.2508544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DIVNHATDI_	REV__ENSG00000156017|ENST00000376834|CARNMT1	47.657333605630114	0.33044192980041115	4				NaN	NaN	0	NaN	11377	3995	15373
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15375	39.121	NaN	3660.1	30	0	264.34	0.106				-1	 	0	66	467.244049894721	932.473546856242	2	467.24420166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11378	3995	15373
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15376	39.122	NaN	3404.3	30	0	337.85	0.036			+	-1	LPVSIPNSCN	10	73	550.7757326345981	NaN	0	550.7763671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LPVSIPNSC(Carbamidomethyl (C))N_	REV__ENSG00000169047|ENST00000305123|IRS1;REV__IRS1|p.H598Tfs*38|3|0.31|ENSG00000169047|chr2:226796948-226796948|C/-|frameshift_variant;REV__IRS1|p.P368Rfs*95|1|0.18|ENSG00000169047|chr2:226797636-226797636|G/-|frameshift_variant	42.86426827375447	0.3507156137006061	4				NaN	NaN	0	NaN	11379	3995	15373
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15381	39.137	NaN	6967.4	30	0	1114	0.214	+			10865	FAVAPNQNL	9	69	487.2581591942139	972.5017654552278	2	487.2586364746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FAVAPNQNL_	COL6A2|p.P584Lfs*12|1|0.46|ENSG00000142173|chr21:46124896-46124896|C/-|frameshift_variant;ENSG00000142173|ENST00000300527|COL6A2;nc|ENSG00000142173|P12110-2|COL6A2;nc|ENSG00000142173|P12110-3|COL6A2	85.35947970620816	0.07794846947388434	4				NaN	NaN	0	NaN	11381	3998	15380
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15382	39.14	NaN	5027.2	30	0	561.12	0.106	+			25337	LPDTLKVTY	9	75	525.2969437065309	1048.5793344798617	2	525.296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LPDTLKVTY_	ENSG00000160255|ENST00000652462|ITGB2;ENST00000475170.5_1_21:46306285-46313576:-|nuORF;ENST00000498666.5_1_21:46313282-46313576:-|nuORF	61.691277971877994	0.19951612995419254	4				NaN	NaN	0	NaN	11382	3998	15380
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15383	39.142	NaN	3313	30	0	484.12	0.106	+			23599	LANKLITVY	9	68	517.8153610090363	1033.6161690848726	2	517.81640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LANKLITVY_	ENSG00000115816|ENST00000234170|CEBPZ	42.396135135203025	0.392153681582562	4				NaN	NaN	0	NaN	11383	3998	15380
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15384	39.144	NaN	4609.1	30	0	563.37	0.106	+			35846	SEDEVKLAL	9	68	502.26825904406655	1002.5219651549331	2	502.268798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SEDEVKLAL_	ENSG00000169045|ENST00000393432|HNRNPH1;ENST00000513972.5_1_5:179047887-179050134:-|nuORF;ENST00000514332.5_1_5:179048171-179050134:-|nuORF;ENST00000524180.5_1_5:179047015-179050134:-|nuORF	115.49404669440601	0.023927554121326553	4				NaN	NaN	0	NaN	11384	3998	15380
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15385	39.146	NaN	2377.1	30	0	267.03	0.106			+	50134	WIHVGSGSL	9	62	478.25297330074795	NaN	0	478.25335693359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_WIHVGSGSL_	REV__nc|ENSG00000085871|Q99735-2|MGST2	47.91560031466742	0.22105767942158736	4				NaN	NaN	0	NaN	11385	3998	15380
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15386	39.148	NaN	2212.9	30	0	642.95	0.106			+	27450	MLLERLRAV	9	45	367.5572981771373	NaN	0	367.8915710449219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MLLERLRAV_	REV__ENSG00000129250|ENST00000320785|KIF1C;REV__KIF1C|p.K1057Sfs*31|1|0.14|ENSG00000129250|chr17:5024005-5024005|A/-|frameshift_variant;REV__KIF1C|p.L962Cfs*126|1|0.31|ENSG00000129250|chr17:5023717-5023717|G/-|frameshift_variant;REV__KIF1C|p.Y1081Ifs*15|1|0.28|ENSG00000129250|chr17:5024072-5024073|-/C|frameshift_variant	26.79610172149135	0.34227917631780574	4				NaN	NaN	0	NaN	11386	3998	15380
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15387	39.15	NaN	1633.9	30	0	314.14	0.032				-1	CGSSCCSCCW	10	44	384.77201394948577	NaN	0	384.7721252441406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C)	_CGSSCCSC(Carbamidomethyl (C))C(Carbamidomethyl (C))W_	ENST00000228741.7_1_12:96588285-96617411:+|nuORF	4.0829091318959865	0.4201028297492154	4				NaN	NaN	0	NaN	11387	3998	15380
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15398	39.173	NaN	14911	30	0	2082.4	0.214			+	9387	EKEDTYKL	8	77	513.2605794107338	1024.5066058882676	2	513.2614135742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EKEDTYKL_	REV__ENSG00000129810|ENST00000412997|SGO1;REV__nc|ENSG00000129810|Q5FBB7|SGO1	93.19546047674547	0.2677966331495483	4				NaN	NaN	0	NaN	11395	4001	15397
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15399	39.177	NaN	16357	30	0	2295.4	0.106				-1	 	0	72	500.7214931495879	999.4284333659758	2	500.72210693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11396	4001	15397
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15400	39.179	NaN	6850.7	30	0	986.98	0.106	+			25338	LPDTLKVTY	9	83	525.2969437065309	1048.5793344798617	2	525.2974243164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LPDTLKVTY_	ENSG00000160255|ENST00000652462|ITGB2;ENST00000475170.5_1_21:46306285-46313576:-|nuORF;ENST00000498666.5_1_21:46313282-46313576:-|nuORF	96.0336014099291	0.047854655524928534	4				NaN	NaN	0	NaN	11397	4001	15397
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15401	39.181	NaN	6496.3	30	0	845.19	0.106	+			11869	FTFSGREL	8	73	478.7449505663315	955.475348199463	2	478.74530029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FTFSGREL_	AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK	104.74654710444128	0.24806011021879068	4				NaN	NaN	0	NaN	11398	4001	15397
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15402	39.182	NaN	8224.7	30	0	2043.3	0.106	+			17864	IFTNTVARF	9	72	534.7950549574812	1067.5755569817622	2	534.7960205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IFTNTVARF_	AKAP11|p.C1327Lfs*13|1|0.05|ENSG00000023516|chr13:42302724-42302725|-/CTTCTACTTTATAATC|frameshift_variant;AKAP11|p.F1607Sfs*48|1|0.11|ENSG00000023516|chr13:42303562-42303562|T/-|frameshift_variant;AKAP11|p.H1753Ifs*3|1|0.11|ENSG00000023516|chr13:42308589-42308589|T/-|frameshift_variant;AKAP11|p.H747Tfs*7|1|0.07|ENSG00000023516|chr13:42300981-42300981|T/-|frameshift_variant;AKAP11|p.N964Mfs*17|1|0.38|ENSG00000023516|chr13:42301633-42301633|A/-|frameshift_variant;AKAP11|p.S919Pfs*33|1|0.11|ENSG00000023516|chr13:42301498-42301498|T/-|frameshift_variant;ENSG00000023516|ENST00000025301|AKAP11	101.45984612302182	0.0377122763612125	4				NaN	NaN	0	NaN	11399	4001	15397
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15403	39.184	NaN	2055.8	30	0	261.38	0.106			+	2033	AKQETLIF	8	60	475.271240234375	NaN	0	475.271240234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AKQETLIF_	REV__ENST00000523562.5_1_16:67203334-67203685:+|nuORF	27.882242232435846	1.7418937515398478	4				NaN	NaN	0	NaN	11400	4001	15397
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15404	39.186	NaN	1942.6	30	0	169.21	0.037				-1	WGFLCITEL	9	68	569.7838596606288	1137.5531663880574	2	569.7849731445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_WGFLC(Carbamidomethyl (C))ITEL_	ENST00000466127.1_1_1:226109155-226109632:-|nuORF	52.29916861842294	0.2778091507991977	4				NaN	NaN	0	NaN	11401	4001	15397
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15410	39.201	NaN	11818	30	0	3392.9	0.214				-1	 	0	76	537.268170749499	1072.5217885657978	2	537.26953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11404	4004	15409
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15411	39.204	NaN	2403.4	30	0	403.62	0.106				-1	 	0	50	379.7251859719733	757.4358190107466	2	379.7254943847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11405	4004	15409
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15412	39.206	NaN	2745.1	30	0	437.1	0.106			+	-1	MLPIDDPSR	9	70	530.2606026802854	1058.5066524273707	2	530.2615966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))LPIDDPSR_	REV__ENSG00000146938|ENST00000381095|NLGN4X;REV__ENSG00000196338|ENST00000358741|NLGN3;REV__nc|ENSG00000146938|Q8N0W4-2|NLGN4X;REV__nc|ENSG00000196338|Q9NZ94-2|NLGN3;REV__nc|ENSG00000196338|Q9NZ94-3|NLGN3;REV__NLGN3|p.R797Q|1|0.77|ENSG00000196338|chrX:71169940-71169940|G/A|missense_variant;REV__NLGN4X|p.R765H|1|0.31|ENSG00000146938|chrX:5892974-5892974|C/T|missense_variant	42.396135135203025	0.392153681582562	4				NaN	NaN	0	NaN	11406	4004	15409
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15413	39.208	NaN	2168.4	30	0	252.49	0.106	+			44768	TTPHLGPGL	9	54	446.7479065702907	891.4812602073814	2	446.74786376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TTPHLGPGL_	ENST00000562775.1_1_16:89589148-89589352:+|nuORF	50.0245360154114	0.3026755932229825	4				NaN	NaN	0	NaN	11407	4004	15409
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15414	39.21	NaN	1647.6	30	0	192.29	0.106			+	7100	CWSEEHCGRQ	10	56	617.7406791866684	1233.4668054401368	2	617.742431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_CWSEEHCGRQ_	REV__ENST00000445189.5_2_22:20878136-20891439:+|nuORF	31.529811441608018	0.6223461015008678	4				NaN	NaN	0	NaN	11408	4004	15409
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15415	39.211	NaN	3354.7	30	0	465.92	0.106			+	25769	LSALFSSKPS	10	66	518.7876924202391	NaN	0	518.7882690429688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSALFSSKPS_	REV__ENSG00000153827|ENST00000675903|TRIP12;REV__nc|ENSG00000153827|Q14669-2|TRIP12;REV__nc|ENSG00000153827|Q14669-3|TRIP12;REV__nc|ENSG00000153827|Q14669-4|TRIP12;REV__nc|ENSG00000153827|Q14669|TRIP12;REV__TRIP12|p.H1434Afs*2|1|0.16|ENSG00000153827|chr2:229791143-229791144|-/T|frameshift_variant;REV__TRIP12|p.S1195Lfs*24|6|0.27|ENSG00000153827|chr2:229796599-229796599|A/-|frameshift_variant;REV__TRIP12|p.Y1552Lfs*6|1|0.12|ENSG00000153827|chr2:229787620-229787621|-/A|frameshift_variant	49.536043120802724	0.30853568297719935	4				NaN	NaN	0	NaN	11409	4004	15409
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15416	39.213	NaN	1587.3	30	0	342.4	0.033	+			17886	IGDAWSHL	8	52	449.7257134466009	NaN	0	449.7257995605469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IGDAWSHL_	ENSG00000104133|ENST00000261866|SPG11;nc|ENSG00000104133|Q96JI7-2|SPG11;nc|ENSG00000104133|Q96JI7-3|SPG11;SPG11|p.P1180S|1|0.45|ENSG00000104133|chr15:44600615-44600615|G/A|missense_variant	42.47446043378293	1.7418937515398478	4				NaN	NaN	0	NaN	11410	4004	15409
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15423	39.231	NaN	9661.2	30	0	705.14	0.214	+			10578	EYIRSLNQF	9	79	585.2998703115511	1168.585187689902	2	585.3004150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EYIRSLNQF_	ENSG00000141452|ENST00000269221|RMC1;ENST00000589215.5_1_18:21087981-21111645:+|nuORF;ENST00000591367.5_1_18:21109371-21111665:+|nuORF	204.624747049445	1.3753862112523631E-05	4				NaN	NaN	0	NaN	11414	4007	15422
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15424	39.235	NaN	5465.9	30	0	664.14	0.106				-1	 	0	55	408.7441833871096	815.4738138410193	2	408.7446594238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11415	4007	15422
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15425	39.237	NaN	3388	30	0	476.84	0.106				-1	 	0	73	541.7844295179335	1081.554306102667	2	541.784912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11416	4007	15422
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15426	39.239	NaN	3873.1	30	0	547.32	0.106			+	-1	FSCAPICW	8	57	492.2087027904704	982.4028526477408	2	492.2084655761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_FSCAPIC(Carbamidomethyl (C))W_	REV__SERTAD4|p.F151I|1|0.36|ENSG00000082497|chr1:210241717-210241717|T/A|missense_variant	69.09296820870183	0.4144562040832486	4				NaN	NaN	0	NaN	11417	4007	15422
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15427	39.24	NaN	2961.8	30	0	436.07	0.106				-1	SLGLDRKM	8	62	468.2537825746222	934.4930122160445	2	468.254150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_SLGLDRKM(Oxidation (M))_	ENSG00000164742|ENST00000297323|ADCY1	47.91560031466742	0.6071945918984287	4				NaN	NaN	0	NaN	11418	4007	15422
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15428	39.242	NaN	4068	30	0	496.51	0.106	+			46611	VFTGVVTKL	9	64	482.29671088077174	962.5788688283435	2	482.2970275878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VFTGVVTKL_	CCAR1|p.E816Kfs*75|1|0.25|ENSG00000060339|chr10:68771347-68771347|A/-|frameshift_variant;CCAR1|p.Q181Kfs*2|1|0.31|ENSG00000060339|chr10:68747178-68747178|C/-|frameshift_variant;CCAR1|p.S739Vfs*11|1|0.47|ENSG00000060339|chr10:68765992-68765992|A/-|frameshift_variant;ENSG00000060339|ENST00000265872|CCAR1;nc|ENSG00000060339|Q8IX12-2|CCAR1	56.43379154798735	0.2433427591689151	4				NaN	NaN	0	NaN	11419	4007	15422
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15429	39.244	NaN	1561.1	30	0	176.23	0.034	+			268	AAMVGGLFR	9	54	461.2526083602989	920.4906637873978	2	461.2530517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AAMVGGLFR_	ENSG00000104522|ENST00000425753|GFUS;ENST00000529899.1_1_8:144698125-144699659:-|nuORF;ENST00000531006.1_1_8:144698125-144698617:-|nuORF;ENST00000531473.5_1_8:144696774-144698909:-|nuORF;ENST00000532308.5_1_8:144696774-144699659:-|nuORF	33.51558372728122	0.4900267029546261	4				NaN	NaN	0	NaN	11420	4007	15422
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15436	39.262	NaN	40468	30	0	7631.3	0.214				-1	 	0	90	499.7682517173415	997.521950501483	2	499.7686462402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11424	4010	15435
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15437	39.265	NaN	14496	30	0	2785.5	0.106	+			18686	ITAVTVNQSL	10	74	523.2973905987737	1044.5802282643474	2	523.298095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ITAVTVNQSL_	CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000425226.1_1_2:203706028-203706388:-|nuORF;ENST00000550170.5_1_12:53294858-53298765:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	166.0711670676379	0.0049346292030699205	4				NaN	NaN	0	NaN	11425	4010	15435
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15438	39.267	NaN	7923.8	30	0	903.7	0.106	+			45308	TVSDAILRY	9	75	519.284441732582	1036.5543305319638	2	519.2860107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVSDAILRY_	ENSG00000002919|ENST00000359238|SNX11;nc|ENSG00000002919|Q9Y5W9-2|SNX11	123.20810148215591	0.019257656778428764	4				NaN	NaN	0	NaN	11426	4010	15435
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15439	39.269	NaN	6522.9	30	0	1060.4	0.106			+	-1	ADARSGGCGM	10	66	470.6837516940335	939.352950454867	2	470.68426513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_ADARSGGCGM(Oxidation (M))_	REV__ENSG00000164929|ENST00000309982|BAALC;REV__nc|ENSG00000164929|Q8WXS3-1|BAALC;REV__nc|ENSG00000164929|Q8WXS3-3|BAALC;REV__nc|ENSG00000164929|Q8WXS3-4|BAALC;REV__nc|ENSG00000164929|Q8WXS3-5|BAALC;REV__nc|ENSG00000164929|Q8WXS3-6|BAALC	32.81241826257853	0.6118718159329168	4				NaN	NaN	0	NaN	11427	4010	15435
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15440	39.271	NaN	2580.1	30	0	217.07	0.106			+	-1	KELPYVIQ	8	69	516.2914721310012	NaN	0	516.2902221679688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))KELPYVIQ_	REV__CFAP61|p.P620S|1|0.3|ENSG00000089101|chr20:20199828-20199828|C/T|missense_variant;REV__ENSG00000089101|ENST00000245957|CFAP61;REV__nc|ENSG00000089101|Q8NHU2-4|CFAP61	35.61828744233558	1.7418937515398478	4				NaN	NaN	0	NaN	11428	4010	15435
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15441	39.273	NaN	3155.9	30	0	563.26	0.106				-1	 	0	41	336.53376577116956	1006.5794679137086	3	336.5342712402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11429	4010	15435
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15442	39.275	NaN	1265.7	30	0	63.607	0.031				-1	 	0	42	347.1982356190398	692.3819183048796	2	347.1990051269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11430	4010	15435
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15449	39.292	NaN	4629.2	30	0	437.86	0.214				-1	 	0	53	372.7172554305648	743.4199579279297	2	372.7174072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11434	4013	15448
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15450	39.296	NaN	2371.3	30	0	439.99	0.106				-1	 	0	54	442.28379705570177	882.5530411782036	2	442.2837829589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11435	4013	15448
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15451	39.298	NaN	1415.6	30	0	108.69	0.106			+	-1	LLMVLTEL	8	57	474.27923337766816	NaN	0	474.2792053222656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_LLM(Oxidation (M))VLTEL_	REV__ENSG00000105983|ENST00000353442|LMBR1;REV__ENST00000434503.5_1_7:156480878-156685794:-|nuORF;REV__nc|ENSG00000105983|Q8WVP7-2|LMBR1;REV__nc|ENSG00000105983|Q8WVP7-3|LMBR1	35.200714571348534	1.7418937515398478	4				NaN	NaN	0	NaN	11436	4013	15448
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15452	39.3	NaN	1040.3	30	0	66.103	0.106			+	50574	YCDMMHQRQF	10	54	679.7773973781703	1357.5402418231406	2	679.779541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YCDMMHQRQF_	REV__ENSG00000106536|ENST00000518318|POU6F2;REV__POU6F2|p.Q374Sfs*22|1|0.52|ENSG00000106536|chr7:39433165-39433165|C/-|frameshift_variant	25.57405402267927	0.6709832231498071	4				NaN	NaN	0	NaN	11437	4013	15448
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15453	39.302	NaN	2404.9	30	0	301.4	0.035	+			27516	MNTIVFNK	8	66	504.7624211681256	NaN	0	504.7625427246094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))MNTIVFNK_	ENSG00000150051|ENST00000419761|MKX;MKX|p.G11S|1|0.59|ENSG00000150051|chr10:27743385-27743385|C/T|missense_variant	63.30626980617807	1.7418937515398478	4				NaN	NaN	0	NaN	11438	4013	15448
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15458	39.316	NaN	13711	30	0	1605.4	0.214	+			49945	VYVQNVVKL	9	78	531.3207825602574	1060.6270121873147	2	531.3215942382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYVQNVVKL_	AP3D1|p.A531T|1|0.3|ENSG00000065000|chr19:2118723-2118723|C/T|missense_variant;ENSG00000065000|ENST00000643116|AP3D1;nc|ENSG00000065000|O14617-2|AP3D1;nc|ENSG00000065000|O14617-3|AP3D1;nc|ENSG00000065000|O14617-4|AP3D1;nc|ENSG00000065000|O14617|AP3D1	157.20854538584396	0.0051889325717705	4				NaN	NaN	0	NaN	11440	4016	15457
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15459	39.319	NaN	2972.4	30	0	281.24	0.106			+	47721	VSFQETVWA	9	69	533.7632784058732	1065.5120038785462	2	533.7635498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSFQETVWA_	REV__AluJr_dup44423|chrX:77901730-77902035:-|1.1282089748604902|0.1951206886456881|2.53|481.0|5|1|sense	56.72105179125745	0.24094814563026265	4				NaN	NaN	0	NaN	11441	4016	15457
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15460	39.321	NaN	2505.2	30	0	137.96	0.037	+			34656	RVRDHPGQY	9	70	564.2893595106893	1126.5641660881786	2	564.2879638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RVRDHPGQY_	ENST00000442007.1_1_6:73985509-73985899:+|nuORF	40.77816245573522	0.41113185337114944	4				NaN	NaN	0	NaN	11442	4016	15457
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15470	39.343	NaN	7783.4	30	0	502.44	0.214			+	6784	CFLILNTQL	9	77	561.3025683929444	1120.5905838526887	2	561.3134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_C(Carbamidomethyl (C))FLILNTQL_	REV__ENSG00000140749|ENST00000268389|IGSF6;REV__ENST00000565499.1_1_16:21658349-21663919:-|nuORF	77.31757898189308	0.1091473830098891	4				NaN	NaN	0	NaN	11449	4019	15469
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15471	39.347	NaN	4732.6	30	0	759.48	0.106	+			11150	FGIDRPAEL	9	69	509.271236095515	1016.52791925783	2	509.27203369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FGIDRPAEL_	ENSG00000105705|ENST00000247001|SUGP1;ENST00000588731.6_1_19:19387459-19414804:-|nuORF;ENST00000589144.5_1_19:19387459-19413207:-|nuORF;ENST00000592188.1_1_19:19387459-19391209:-|nuORF	90.60085204095205	0.06317133949006545	4				NaN	NaN	0	NaN	11450	4019	15469
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15472	39.349	NaN	4166.8	30	0	407.2	0.106	+			27715	MQILWINI	8	69	515.7934383180171	NaN	0	515.79296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MQILWINI_	ENSG00000017260|ENST00000510168|ATP2C1;ENSG00000064270|ENST00000262429|ATP2C2;nc|ENSG00000017260|P98194-2|ATP2C1;nc|ENSG00000017260|P98194-3|ATP2C1;nc|ENSG00000017260|P98194-4|ATP2C1;nc|ENSG00000017260|P98194-5|ATP2C1;nc|ENSG00000017260|P98194-6|ATP2C1;nc|ENSG00000017260|P98194-7|ATP2C1;nc|ENSG00000017260|P98194-8|ATP2C1;nc|ENSG00000017260|P98194-9|ATP2C1;nc|ENSG00000064270|O75185-2|ATP2C2;nc|ENSG00000064270|O75185-3|ATP2C2	45.9519527083369	1.7418937515398478	4				NaN	NaN	0	NaN	11451	4019	15469
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15473	39.351	NaN	2735.9	30	0	192.4	0.106				-1	 	0	64	552.2730452855128	551.2657688189128	1	552.275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11452	4019	15469
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15474	39.352	NaN	2946.9	30	0	199.64	0.106	+			31602	QLVAYHRY	8	68	525.2792623012317	1048.5439716692633	2	525.7816162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QLVAYHRY_	ENST00000355765.10_1_14:45584217-45584328:+|nuORF	42.47446043378293	0.6409579893742323	4				NaN	NaN	0	NaN	11453	4019	15469
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15475	39.354	NaN	1343.1	30	0	110.28	0.038	+			24511	LGKEITWPYL	10	53	610.3385520845156	NaN	0	610.3379516601562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LGKEITWPYL_	SLC2A9|p.S229I|1|0.31|ENSG00000109667|chr4:9942041-9942041|C/A|missense_variant	24.519189625965996	0.41966695327750003	4				NaN	NaN	0	NaN	11454	4019	15469
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15486	39.378	NaN	30179	30	0	7374.4	0.214				-1	 	0	76	498.2915350522448	994.5685171712896	2	498.29205322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11462	4022	15485
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15487	39.381	NaN	6998.9	30	0	656.3	0.106	+			44876	TTVLLQSLV	9	72	487.29941978481855	972.5842866364371	2	487.2996826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTVLLQSLV_	ENSG00000213676|ENST00000375203|ATF6B;ENST00000495579.5_1_6:32088425-32095984:-|nuORF;nc|ENSG00000213676|Q99941-2|ATF6B	56.43379154798735	0.2433427591689151	4				NaN	NaN	0	NaN	11463	4022	15485
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15488	39.383	NaN	4701.6	30	0	1866.1	0.106				-1	 	0	67	521.7813553820491	1041.5481578308982	2	521.7824096679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11464	4022	15485
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15489	39.385	NaN	6069.4	30	0	764.34	0.106	+			28256	NDIVVKVL	8	63	450.28120367514816	898.5478544170963	2	450.2816162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NDIVVKVL_	ENSG00000166333|ENST00000299421|ILK;nc|ENSG00000166333|Q13418-2|ILK;nc|ENSG00000166333|Q13418-3|ILK	98.62937762414208	0.25143494708580966	4				NaN	NaN	0	NaN	11465	4022	15485
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15490	39.387	NaN	2809.1	30	0	417.06	0.106	+			46476	VETGKIVAL	9	61	465.2866471705182	NaN	0	465.2866516113281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VETGKIVAL_	CDK20|p.E28K|1|0.25|ENSG00000156345|chr9:87974029-87974029|C/T|missense_variant	37.81151784470057	0.28666463014928195	4				NaN	NaN	0	NaN	11466	4022	15485
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15491	39.389	NaN	11414	30	0	1684.4	0.036				-1	 	0	70	548.2687470237826	1094.522941114365	2	548.27001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11467	4022	15485
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15492	39.389	NaN	1977.5	30	0	268.27	0.145	+			46257	VEFVPGESLK	10	38	368.8693075576631	1103.5860932731894	3	368.8699645996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VEFVPGESLK_	sp|F5HE05|US02_HCMVMUniqueshortUS2glycoproteinOS=Humancytomegalovirus(strainMerlin)OX=295027GN=US2PE=2SV=1;sp|P09713|US02_HCMVAUniqueshortUS2glycoproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=US2PE=1SV=1	27.882242232435846	0.6521336255503853	4				NaN	NaN	0	NaN	11468	4022	15485
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15502	39.413	NaN	11470	30	0	2844.4	0.214				-1	 	0	71	490.2669244702782	978.5192960073564	2	490.26708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11475	4025	15501
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15503	39.417	NaN	4011.8	30	0	987.95	0.106	+			4264	ATGFLEQLK	9	70	503.78055237520954	1005.5465518172191	2	503.7821044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATGFLEQLK_	ENSG00000004866|ENST00000323984|ST7;ENST00000417919.5_3_7:116593594-116738680:+|nuORF;nc|ENSG00000004866|Q9NRC1-2|ST7;nc|ENSG00000004866|Q9NRC1-3|ST7;nc|ENSG00000004866|Q9NRC1-7|ST7;nc|ENSG00000004866|Q9NRC1|ST7	63.53385203322761	0.18415635464017938	4				NaN	NaN	0	NaN	11476	4025	15501
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15504	39.419	NaN	1230.4	30	0	157.62	0.106			+	38767	SSLTEEHEVRA	11	53	629.3043558924143	1256.5941588516284	2	629.30517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSLTEEHEVRA_	REV__GPC3|p.H377R|1|0.64|ENSG00000147257|chrX:133699931-133699931|T/C|missense_variant	21.68575002086885	0.7623253651248338	4				NaN	NaN	0	NaN	11477	4025	15501
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15505	39.42	NaN	1459	30	0	148.75	0.106				-1	YTCEKSCWPP	10	68	635.7643403554748	NaN	0	635.7644653320312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_YTC(Carbamidomethyl (C))EKSCWPP_	ENSG00000126249|ENST00000246535|PDCD2L	25.57405402267927	0.4162033004763879	4				NaN	NaN	0	NaN	11478	4025	15501
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15506	39.422	NaN	2451.9	30	0	128.59	0.106			+	10900	FDDALFKSF	9	74	545.2671770963252	1088.5198012594503	2	545.2681884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FDDALFKSF_	REV__ENSG00000168434|ENST00000307149|COG7	52.936696900407355	0.27249468807391813	4				NaN	NaN	0	NaN	11479	4025	15501
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15507	39.424	NaN	1636.9	30	0	186.5	0.034				-1	 	0	55	457.27635347495595	912.5381540167119	2	457.277099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11480	4025	15501
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15513	39.439	NaN	6205.4	30	0	673.14	0.214	+			36177	SELIRNVTL	9	75	522.806400474909	NaN	0	522.8062133789062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SELIRNVTL_	ENSG00000108883|ENST00000426333|EFTUD2;ENST00000589825.5_1_17:42960950-42971889:-|nuORF;nc|ENSG00000108883|Q15029-2|EFTUD2;nc|ENSG00000108883|Q15029-3|EFTUD2	68.84614121027924	0.11159004992091766	4				NaN	NaN	0	NaN	11483	4028	15512
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15514	39.442	NaN	4891.6	30	0	372.33	0.106			+	27182	MDRTSVKEAY	10	74	600.2895397580315	1198.564526582863	2	600.2904052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MDRTSVKEAY_	REV__ENST00000407121.1_1_6:100023791-100023977:+|nuORF	52.936696900407355	0.4300801048568001	4				NaN	NaN	0	NaN	11484	4028	15512
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15515	39.444	NaN	2747.2	30	0	329.45	0.106				-1	 	0	56	464.2967088368225	926.578864740445	2	464.2969665527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11485	4028	15512
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15516	39.446	NaN	7752.7	30	0	1293.5	0.106				-1	 	0	74	513.2843831259132	1024.5542133186264	2	513.2869873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11486	4028	15512
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15517	39.448	NaN	1674.3	30	0	177.29	0.106	+			47746	VSGLSVVPV	9	54	428.7606994687307	855.5068460042614	2	428.7601623535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSGLSVVPV_	ENST00000487891.1_1_3:49020199-49020700:+|nuORF	63.30626980617807	0.18605348971131092	4				NaN	NaN	0	NaN	11487	4028	15512
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15518	39.45	NaN	2755.7	30	0	375.4	0.106	+			9588	ELKHWATF	8	65	516.268386583211	1030.522220233222	2	516.2691040039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ELKHWATF_	ENSG00000162139|ENST00000294064|NEU3;nc|ENSG00000162139|Q9UQ49|NEU3	38.80614096846853	0.6637206697844082	4				NaN	NaN	0	NaN	11488	4028	15512
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15519	39.451	NaN	10510	30	0	2181.1	0.035				-1	 	0	75	513.2843831259132	1024.5542133186264	2	513.787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11489	4028	15512
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15527	39.47	NaN	3989.5	30	0	368.34	0.214			+	11277	FIVRAMQF	8	70	506.2768533034844	1010.5391536737689	2	506.279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FIVRAMQF_	REV__ENSG00000171984|ENST00000303142|SHLD1	68.484700416344	0.4195245774506064	4				NaN	NaN	0	NaN	11494	4031	15526
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15528	39.473	NaN	7043.2	30	0	915.12	0.106	+			28995	NSMGLFLQK	9	73	519.2754222530198	1036.5362915728394	2	519.277587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NSMGLFLQK_	ENSG00000079459|ENST00000220584|FDFT1;ENST00000446331.6_1_8:11660331-11696115:+|nuORF;FDFT1|p.N215S|1|0.21|ENSG00000079459|chr8:11826157-11826157|A/G|missense_variant;nc|ENSG00000079459|P37268-2|FDFT1;nc|ENSG00000079459|P37268-3|FDFT1;nc|ENSG00000079459|P37268-4|FDFT1;nc|ENSG00000079459|P37268-5|FDFT1	95.81516180277367	0.04847050768394289	4				NaN	NaN	0	NaN	11495	4031	15526
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15529	39.475	NaN	5748	30	0	1388.8	0.106			+	30614	QARITKCD	8	66	467.74208510264606	933.4696172720921	2	467.74212646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QARITKCD_	REV__ENST00000400943.3_1_1:240136137-240136869:+|nuORF	37.81151784470057	0.6698925118251505	4				NaN	NaN	0	NaN	11496	4031	15526
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15530	39.477	NaN	2048	30	0	169.37	0.106	+			51369	YTHTSQVE	8	56	482.72191760210956	963.4292822710191	2	482.72186279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YTHTSQVE_	VCAN|p.P2285T|1|0.25|ENSG00000038427|chr5:83539856-83539856|C/A|missense_variant	38.80614096846853	0.6637206697844082	4				NaN	NaN	0	NaN	11497	4031	15526
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15531	39.479	NaN	2145.8	30	0	154.86	0.106			+	498	ACEKATLKAY	10	63	577.7971285821498	NaN	0	577.7969360351562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_AC(Carbamidomethyl (C))EKATLKAY_	REV__tr|U7SQT6|U7SQT6_FUSNUEamAdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01789PE=4SV=1	42.86426827375447	0.3507156137006061	4				NaN	NaN	0	NaN	11498	4031	15526
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15532	39.48	NaN	3827	30	0	615.69	0.035				-1	 	0	65	508.7917356919287	1015.5689184506574	2	509.2939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11499	4031	15526
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15533	39.481	NaN	2928.8	30	0	169.55	0.14			+	18589	ISPVSSVPTY	10	72	525.2792623012317	1048.5439716692633	2	525.7816772460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ISPVSSVPTY_	REV__ENSG00000139746|ENST00000438737|RBM26;REV__nc|ENSG00000139746|Q5T8P6-2|RBM26;REV__nc|ENSG00000139746|Q5T8P6-3|RBM26;REV__RBM26|p.N783Ifs*5|1|0.11|ENSG00000139746|chr13:79342743-79342743|T/-|frameshift_variant;REV__RBM26|p.P348Hfs*11|1|0.21|ENSG00000139746|chr13:79366725-79366725|G/-|frameshift_variant	42.396135135203025	0.5270658956260207	4				NaN	NaN	0	NaN	11500	4031	15526
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15537	39.497	NaN	4795	30	0	828.77	0.214				-1	 	0	75	508.7917356919287	1015.5689184506574	2	508.7922668457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11501	4034	15536
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15538	39.5	NaN	2434.9	30	0	287.99	0.106				-1	 	0	53	437.7364050518533	873.4582571705066	2	437.7367858886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11502	4034	15536
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15539	39.502	NaN	3325.9	30	0	756	0.106	+			11884	FTLVGLEEPL	10	48	373.20980414209225	NaN	0	373.209716796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FTLVGLEEPL_	ENSG00000198841|ENST00000371614|KTI12	20.94693142431847	0.4201028297492154	4				NaN	NaN	0	NaN	11503	4034	15536
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15540	39.504	NaN	899.44	30	0	51.281	0.031				-1	 	0	41	347.1923183724477	346.1850419058477	1	347.1927490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11504	4034	15536
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15547	39.52	NaN	7129	30	0	494.89	0.214	+			21613	KPNGLILQY	9	77	523.3049555103631	1044.5953580875262	2	523.3060302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KPNGLILQY_	ENSG00000013375|ENST00000513973|PGM3;ENST00000515333.1_1_6:83900509-83900731:-|nuORF;nc|ENSG00000013375|O95394-3|PGM3;nc|ENSG00000013375|O95394-4|PGM3	49.44154591367651	0.3095138337212152	4				NaN	NaN	0	NaN	11508	4037	15546
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15548	39.524	NaN	3003.7	30	0	407.23	0.106	+			14036	GSGNYNDFGNY	11	66	604.2358695870372	1206.4571862408743	2	604.2357177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSGNYNDFGNY_	ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1	60.1669710687717	0.32196467475348695	4				NaN	NaN	0	NaN	11509	4037	15546
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15549	39.526	NaN	2268.8	30	0	294.67	0.106				-1	 	0	65	500.7214931495879	999.4284333659758	2	500.7214660644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11510	4037	15546
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15550	39.528	NaN	2822.5	30	0	266.92	0.106	+			51201	YPNVNIHNF	9	70	559.275086304108	NaN	0	559.2750244140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YPNVNIHNF_	ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1;SPTBN1|p.K503Rfs*24|1|0.06|ENSG00000115306|chr2:54626095-54626095|G/-|frameshift_variant	55.50420428727701	0.16876052142120426	4				NaN	NaN	0	NaN	11511	4037	15546
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15551	39.53	NaN	1489.3	30	0	98.033	0.106			+	31771	QPHLYSLIW	9	65	578.8103223580604	1155.6060917829207	2	578.8093872070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QPHLYSLIW_	REV__ENST00000367279.8_1_1:202128675-202129107:-|nuORF	35.61828744233558	0.47037581924408073	4				NaN	NaN	0	NaN	11512	4037	15546
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15552	39.531	NaN	2202	30	0	390.23	0.106				-1	QKNEKCVLY	9	68	591.30419921875	NaN	0	591.30419921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_QKNEKC(Carbamidomethyl (C))VLY_	PTPRR|p.E496Q|1|0.22|ENSG00000153233|chr12:70684138-70684138|C/G|missense_variant	44.116797842482775	0.2472372736944149	4				NaN	NaN	0	NaN	11513	4037	15546
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15553	39.533	NaN	3208.9	30	0	292.49	0.034				-1	 	0	58	479.7814530718742	957.5483532105484	2	479.7818298339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11514	4037	15546
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15562	39.553	NaN	8487.4	30	0	2007	0.214				-1	 	0	78	537.268170749499	1072.5217885657978	2	537.2694702148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11520	4040	15561
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15563	39.557	NaN	8690.8	30	0	1953.5	0.106	+			46583	VFPDKGYSF	9	75	530.2606026802854	1058.5066524273707	2	530.26123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VFPDKGYSF_	ENSG00000116001|ENST00000433529|TIA1;ENST00000477415.5_1_2:70443338-70451751:-|nuORF;ENST00000482876.5_1_2:70442329-70444102:-|nuORF;nc|ENSG00000116001|P31483-2|TIA1	45.97224482568171	0.3502073465782774	4				NaN	NaN	0	NaN	11521	4040	15561
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15564	39.559	NaN	7446.2	30	0	899.27	0.106	+			20286	KENSLITQF	9	74	540.2883217901266	1078.562090647053	2	540.2904052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KENSLITQF_	ENSG00000102699|ENST00000381989|PARP4	65.46538089061403	0.16805504838372562	4				NaN	NaN	0	NaN	11522	4040	15561
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15565	39.561	NaN	12943	30	0	1806.5	0.106				-1	 	0	71	479.7814530718742	957.5483532105484	2	479.7817077636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11523	4040	15561
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15566	39.562	NaN	7118.7	30	0	1345.9	0.106	+			39149	SSVPGVRLL	9	81	464.2837604160555	926.552967898911	2	464.28277587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSVPGVRLL_	ENSG00000026025|ENST00000544301|VIM;ENST00000485947.1_1_10:17271421-17272784:+|nuORF;VIM|p.R71W|1|0.4|ENSG00000026025|chr10:17229633-17229633|C/T|missense_variant	56.72105179125745	0.24094814563026265	4				NaN	NaN	0	NaN	11524	4040	15561
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15567	39.564	NaN	2434.3	30	0	188.48	0.034			+	8293	EAINQYLL	8	61	482.2604165511904	NaN	0	482.2601623535156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EAINQYLL_	REV__ENSG00000185985|ENST00000335565|SLITRK2	40.5726180659479	1.7418937515398478	4				NaN	NaN	0	NaN	11525	4040	15561
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15568	39.565	NaN	3071.7	30	0	281.6	0.141	+			44474	TSQRIFITY	9	63	564.8050981342941	1127.595643335388	2	564.8060302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TSQRIFITY_	DENND4C|p.F1650Yfs*12|1|0.38|ENSG00000137145|chr9:19358095-19358096|TT/-|frameshift_variant;DENND4C|p.R1677Dfs*12|1|0.24|ENSG00000137145|chr9:19360255-19360255|A/-|frameshift_variant;ENSG00000137145|ENST00000434457|DENND4C;nc|ENSG00000137145|Q5VZ89-3|DENND4C;nc|ENSG00000137145|Q5VZ89-5|DENND4C;nc|ENSG00000137145|Q5VZ89|DENND4C	30.317721548370564	0.5199124245378496	4				NaN	NaN	0	NaN	11526	4040	15561
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15575	39.583	NaN	5053.8	30	0	500.86	0.214	+			16391	HENLTYVQL	9	81	558.7870849455197	1115.5596169578394	2	558.7884521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HENLTYVQL_	ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1	63.53385203322761	0.18415635464017938	4				NaN	NaN	0	NaN	11530	4043	15574
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15576	39.587	NaN	3107.2	30	0	534.52	0.106				-1	LLCVLLLYP	9	51	368.5562479789703	NaN	0	368.2219543457031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LLC(Carbamidomethyl (C))VLLLYP_	HERVH-int_dup3527|chrX:4542813-4545870:-|8.094520876636611|0.0139942278604804|9.18|476.0|62|3|sense	37.15910966729921	0.2899585034171616	4				NaN	NaN	0	NaN	11531	4043	15574
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15577	39.589	NaN	2371.5	30	0	532.14	0.106				-1	 	0	47	429.22883418186774	856.4431154305355	2	429.229248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11532	4043	15574
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15578	39.59	NaN	2319.4	30	0	321.15	0.106	+			46598	VFRGQELAF	9	63	533.7878860606215	1065.561219188043	2	534.2921752929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VFRGQELAF_	ENSG00000254772|ENST00000329251|EEF1G;ENST00000434365.1_1_X:114938170-114938437:+|nuORF;ENST00000467631.1_1_3:161042821-161042974:-|nuORF;ENST00000526409.5_1_11:62327153-62342310:-|nuORF;nc|ENSG00000254772|P26641-2|EEF1G	23.04248740728303	0.5879033540491928	4				NaN	NaN	0	NaN	11533	4043	15574
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15579	39.592	NaN	968.12	30	0	177.86	0.106				-1	 	0	38	394.88107145470946	1181.6213849643284	3	394.8813171386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11534	4043	15574
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15580	39.594	NaN	1361.1	30	0	169.16	0.106	+			22434	KTLDPLVI	8	43	449.7839462337499	NaN	0	449.78387451171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KTLDPLVI_	ENSG00000171495|ENST00000399564|MROH2B;MROH2B|p.D1229Tfs*15|1|0.23|ENSG00000171495|chr5:41007378-41007378|C/-|frameshift_variant;MROH2B|p.S691Lfs*6|1|0.45|ENSG00000171495|chr5:41038879-41038879|A/-|frameshift_variant;nc|ENSG00000171495|Q7Z745-2|MROH2B	44.116797842482775	1.7418937515398478	4				NaN	NaN	0	NaN	11535	4043	15574
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15581	39.596	NaN	2115.9	30	0	171.6	0.036			+	27466	MLPPSKTISN	10	65	544.297920805185	NaN	0	544.2990112304688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MLPPSKTISN_	REV__DENND4C|p.F1650Yfs*12|1|0.38|ENSG00000137145|chr9:19358095-19358096|TT/-|frameshift_variant;REV__DENND4C|p.R1677Dfs*12|1|0.24|ENSG00000137145|chr9:19360255-19360255|A/-|frameshift_variant;REV__ENSG00000137145|ENST00000434457|DENND4C;REV__ENST00000380437.8_1_9:19290781-19335045:+|nuORF;REV__ENST00000494124.2_1_9:19316810-19337609:+|nuORF;REV__nc|ENSG00000137145|Q5VZ89-3|DENND4C;REV__nc|ENSG00000137145|Q5VZ89-5|DENND4C;REV__nc|ENSG00000137145|Q5VZ89|DENND4C	32.75053402867276	0.3926392905881664	4				NaN	NaN	0	NaN	11536	4043	15574
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15585	39.61	NaN	20614	30	0	1950	0.214				-1	 	0	76	528.771119895166	1055.5276868571318	2	528.77197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11537	4046	15584
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15586	39.613	NaN	1875.9	30	0	268.27	0.106	+			7760	DNSRMSCQ	8	61	470.6837516940335	939.352950454867	2	470.68414306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DNSRMSCQ_	ENSG00000102908|ENST00000349945|NFAT5;nc|ENSG00000102908|O94916-2|NFAT5;nc|ENSG00000102908|O94916-4|NFAT5;nc|ENSG00000102908|O94916|NFAT5	23.04248740728303	0.7814162927298575	4				NaN	NaN	0	NaN	11538	4046	15584
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15587	39.615	NaN	2288.8	30	0	318.93	0.106			+	-1	DGARLSNM	8	56	440.2029732319786	878.3913935307572	2	440.2030944824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_DGARLSNM(Oxidation (M))_	REV__nc|ENSG00000211942|P01766|IGHV3-13	34.172542307311794	0.6954784234644539	4				NaN	NaN	0	NaN	11539	4046	15584
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15588	39.617	NaN	2024.3	30	0	273.61	0.106			+	-1	MMLLGMKPG	9	59	497.2522307457264	992.4899085582529	2	497.2534484863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_M(Oxidation (M))MLLGMKPG_	REV__ENSG00000198934|ENST00000361470|MAGEE1;REV__MAGEE1|p.E715*|1|0.29|ENSG00000198934|chrX:76430066-76430067|-/T|frameshift_variant;REV__MAGEE1|p.F714Lfs*74|1|0.78|ENSG00000198934|chrX:76430067-76430067|T/-|frameshift_variant	33.51558372728122	0.4900267029546261	4				NaN	NaN	0	NaN	11540	4046	15584
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15589	39.619	NaN	2046	30	0	323.28	0.106				-1	 	0	37	336.53376577116956	1006.5794679137086	3	336.5340881347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11541	4046	15584
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15590	39.621	NaN	1801.4	30	0	203.19	0.106			+	37307	SLDIKTLPL	9	63	500.3079528808594	NaN	0	500.3079528808594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLDIKTLPL_	REV__ENSG00000091656|ENST00000651372|ZFHX4;REV__nc|ENSG00000091656|Q86UP3-2|ZFHX4;REV__nc|ENSG00000091656|Q86UP3-4|ZFHX4;REV__nc|ENSG00000091656|Q86UP3|ZFHX4;REV__ZFHX4|p.Y3286Ifs*70|1|0.46|ENSG00000091656|chr8:76863562-76863563|-/G|frameshift_variant	42.86426827375447	0.2558691296974908	4				NaN	NaN	0	NaN	11542	4046	15584
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15591	39.622	NaN	3304.8	30	0	778.07	0.037	+			1083	AELATLGA	8	54	373.20980414209225	NaN	0	373.2101745605469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AELATLGA_	ENSG00000130244|ENST00000252530|FAM98C;ENST00000589029.1_3_19:38893832-38894179:+|nuORF;nc|ENSG00000130244|Q17RN3-2|FAM98C;REV__ENSG00000150201|ENST00000476166|FXYD4	28.2542754592877	1.7418937515398478	4				NaN	NaN	0	NaN	11543	4046	15584
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15597	39.639	NaN	908.85	30	0	55.044	0.214				-1	 	0	42	347.19813524544014	692.3817175576803	2	347.1986389160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11546	4049	15596
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15598	39.642	NaN	2366.3	30	0	173.34	0.106	+			32774	RARNQLSK	8	70	486.78806458231895	971.5615762314379	2	486.7887878417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RARNQLSK_	ENST00000466758.5_1_3:182602545-182631653:+|nuORF	53.351449002276354	0.5676011784961348	4				NaN	NaN	0	NaN	11547	4049	15596
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15599	39.644	NaN	2156.1	30	0	441.5	0.106			+	24838	LIYGLNKF	8	59	484.2841827464156	NaN	0	484.2837219238281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LIYGLNKF_	REV__tr|U7T245|U7T245_FUSNUUDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanineligaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=murFPE=3SV=1	52.29916861842294	1.7418937515398478	4				NaN	NaN	0	NaN	11548	4049	15596
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15600	39.646	NaN	1860.3	30	0	282.49	0.032				-1	CGSSCCSCCW	10	47	384.7719450320824	NaN	0	384.7718505859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_CGSSCCSC(Carbamidomethyl (C))C(Carbamidomethyl (C))W_	ENST00000228741.7_1_12:96588285-96617411:+|nuORF	1.8869224993972666	0.4201028297492154	4				NaN	NaN	0	NaN	11549	4049	15596
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15605	39.66	NaN	3565	30	0	236.05	0.214			+	45193	TVNLIIMISP	10	71	550.8217523498887	NaN	0	550.8204956054688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVNLIIMISP_	REV__tr|U7T220|U7T220_FUSNUDUF304domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00437PE=4SV=1	35.15202426646627	0.38475398474706135	4				NaN	NaN	0	NaN	11551	4052	15604
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15606	39.664	NaN	3055.3	30	0	367.87	0.106			+	29598	PFRMSRSL	8	56	497.2694578258421	NaN	0	497.26611328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PFRMSRSL_	REV__ENST00000460307.1_1_2:70528513-70529143:-|nuORF	44.116797842482775	1.7418937515398478	4				NaN	NaN	0	NaN	11552	4052	15604
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15607	39.666	NaN	3023.3	30	0	432.5	0.106	+			24471	LGGGHAYCRNP	11	70	572.7699197615786	1143.5252865899572	2	572.7711791992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LGGGHAYCRNP_	ENSG00000169071|ENST00000375708|ROR2	26.69291269510374	0.70980431218767	4				NaN	NaN	0	NaN	11553	4052	15604
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15608	39.668	NaN	3856	30	0	383.49	0.037	+			29783	PIKIVHSESQ	10	70	569.3155004553915	1136.616447977583	2	569.8184814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PIKIVHSESQ_	ENSG00000146950|ENST00000380913|SHROOM2	51.52775601994872	0.4429225830406686	4				NaN	NaN	0	NaN	11554	4052	15604
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15616	39.686	NaN	12154	30	0	1321.6	0.214				-1	 	0	77	522.278992624985	1042.54343231677	2	522.2800903320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11559	4055	15615
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15617	39.689	NaN	4145.9	30	0	581.23	0.106	+			13669	GNYNDFGNY	9	71	532.2089654740528	1062.4033780149055	2	532.2100219726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GNYNDFGNY_	ENSG00000122566|ENST00000618183|HNRNPA2B1;ENSG00000170144|ENST00000392524|HNRNPA3;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;ENST00000472163.1_1_3:75263799-75264780:+|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1;nc|ENSG00000170144|P51991-2|HNRNPA3	93.1432384553994	0.056003526918089595	4				NaN	NaN	0	NaN	11560	4055	15615
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15618	39.691	NaN	2702.4	30	0	815.66	0.106			+	16610	HGPMKATQARG	11	71	577.2968139648438	NaN	0	577.2968139648438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HGPMKATQARG_	REV__ENST00000598922.1_1_19:23586239-23598773:-|nuORF;REV__ENST00000600643.5_1_19:23588062-23598863:-|nuORF;REV__ENST00000601293.5_1_19:23586239-23598875:-|nuORF;REV__ENST00000601338.5_1_19:23588133-23598773:-|nuORF;REV__ENST00000602077.5_1_19:23586282-23598827:-|nuORF	41.42661286455405	0.376895999158515	4				NaN	NaN	0	NaN	11561	4055	15615
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15619	39.693	NaN	2984.2	30	0	351.26	0.106			+	17932	IGLAELSIK	9	62	472.2941692207507	942.5737855083014	2	472.29425048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IGLAELSIK_	REV__ENSG00000119042|ENST00000417098|SATB2;REV__nc|ENSG00000119042|Q9UPW6-2|SATB2	66.42927471994793	0.16001998865088202	4				NaN	NaN	0	NaN	11562	4055	15615
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15620	39.695	NaN	1355.6	30	0	149.98	0.106				-1	 	0	36	349.26430810816095	696.5140632831219	2	349.26495361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11563	4055	15615
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15621	39.697	NaN	2100.6	30	0	288.13	0.033				-1	GMGPREAE	8	51	431.6897846038877	861.3650162745754	2	431.6904602050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_GM(Oxidation (M))GPREAE_	ENSG00000108947|ENST00000226091|EFNB3	37.15910966729921	0.6739408393984688	4				NaN	NaN	0	NaN	11564	4055	15615
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15622	39.697	NaN	1331.3	30	0	109.64	0.142				-1	MLTLDDHYH	9	59	580.7547919277443	NaN	0	580.7559814453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_M(Oxidation (M))LTLDDHYH_	PDE4A|p.E423D|1|0.34|ENSG00000065989|chr19:10459663-10459663|G/T|missense_variant	30.503639358989545	0.3235605894931338	4				NaN	NaN	0	NaN	11565	4055	15615
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15627	39.714	NaN	18257	30	0	2196.1	0.214	+			8822	EELKKMVQQ	9	73	574.8021678241619	1147.5897827151236	2	574.8031616210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_EELKKM(Oxidation (M))VQQ_	ALG2|p.Q282E|1|0.08|ENSG00000119523|chr9:99218341-99218341|G/C|missense_variant	79.45101966838831	0.09992237243120712	4				NaN	NaN	0	NaN	11567	4058	15626
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15628	39.717	NaN	9715.3	30	0	1059.4	0.106	+			49501	VWAAVPGKTF	10	78	538.301302404013	1074.5880518748259	2	538.3007202148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VWAAVPGKTF_	CON__P02584;ENSG00000108518|ENST00000225655|PFN1	84.81729255234993	0.1607459278640679	4				NaN	NaN	0	NaN	11568	4058	15626
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15629	39.719	NaN	7589.8	30	0	964.68	0.106				-1	 	0	73	488.2765423338255	974.538531734451	2	488.2770690917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11569	4058	15626
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15630	39.721	NaN	6159.6	30	0	916.36	0.106	+			26610	LTYNDFINK	9	82	564.2906874643876	NaN	0	564.2901611328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LTYNDFINK_	ENSG00000077097|ENST00000264331|TOP2B;ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000077097|Q02880-2|TOP2B;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A;TOP2A|p.K1199Efs*11|1|0.23|ENSG00000131747|chr17:40396408-40396409|-/C|frameshift_variant;TOP2A|p.T1205Hfs*19|4|0.35|ENSG00000131747|chr17:40396390-40396390|T/-|frameshift_variant;TOP2B|p.S1441Kfs*20|1|0.32|ENSG00000077097|chr3:25606099-25606100|-/T|frameshift_variant;TOP2B|p.S1441Vfs*41|4|0.13|ENSG00000077097|chr3:25606100-25606100|T/-|frameshift_variant;TOP2B|p.S1476Ffs*11|2|0.3|ENSG00000077097|chr3:25604822-25604823|-/A|frameshift_variant	88.17693792209575	0.04527150213038833	4				NaN	NaN	0	NaN	11570	4058	15626
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15631	39.723	NaN	4977.9	30	0	1095.5	0.106	+			32622	QYPGRSLVF	9	75	533.7878860606215	1065.561219188043	2	534.2908935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QYPGRSLVF_	ENSG00000089737|ENST00000621632|DDX24;ENST00000555762.1_1_14:94524146-94547480:-|nuORF;nc|ENSG00000089737|Q9GZR7-2|DDX24	34.172542307311794	0.4838870758800184	4				NaN	NaN	0	NaN	11571	4058	15626
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15632	39.724	NaN	4982.4	30	0	1168.1	0.106				-1	 	0	55	433.75210568107997	865.48965842896	2	433.7525329589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11572	4058	15626
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15633	39.726	NaN	3184.9	30	0	223.64	0.035			+	36888	SIGSFIAKDV	10	68	518.7885200521193	NaN	0	518.788330078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SIGSFIAKDV_	REV__ENSG00000167548|ENST00000301067|KMT2D;REV__KMT2D|p.A2119Lfs*25|1|0.13|ENSG00000167548|chr12:49041416-49041416|G/-|frameshift_variant;REV__KMT2D|p.A221Lfs*40|1|0.08|ENSG00000167548|chr12:49053990-49053990|C/-|frameshift_variant;REV__KMT2D|p.A3552Sfs*4|1|0.51|ENSG00000167548|chr12:49034153-49034154|-/T|frameshift_variant;REV__KMT2D|p.A5076Hfs*2|1|0.12|ENSG00000167548|chr12:49026740-49026740|C/-|frameshift_variant;REV__KMT2D|p.G1235Vfs*95|2|0.26|ENSG00000167548|chr12:49049884-49049884|C/-|frameshift_variant;REV__KMT2D|p.G2279Wfs*20|1|0.45|ENSG00000167548|chr12:49040935-49040936|-/A|frameshift_variant;REV__KMT2D|p.G5182Afs*61|1|0.57|ENSG00000167548|chr12:49026421-49026421|C/-|frameshift_variant;REV__KMT2D|p.K1466Rfs*40|1|0.31|ENSG00000167548|chr12:49046632-49046632|G/-|frameshift_variant;REV__KMT2D|p.M999Yfs*69|1|0.2|ENSG00000167548|chr12:49050594-49050595|-/G|frameshift_variant;REV__KMT2D|p.P2354Lfs*30|7|0.16|ENSG00000167548|chr12:49040709-49040709|G/-|frameshift_variant;REV__KMT2D|p.P2716Lfs*17|1|0.24|ENSG00000167548|chr12:49039519-49039519|C/-|frameshift_variant;REV__KMT2D|p.P3102Lfs*17|1|0.26|ENSG00000167548|chr12:49038051-49038051|G/-|frameshift_variant;REV__KMT2D|p.P647Hfs*283|2|0.23|ENSG00000167548|chr12:49051743-49051743|G/-|frameshift_variant;REV__KMT2D|p.P886Lfs*44|1|0.57|ENSG00000167548|chr12:49051026-49051026|G/-|frameshift_variant;REV__KMT2D|p.P998Lfs*2|1|0.39|ENSG00000167548|chr12:49050595-49050595|G/-|frameshift_variant;REV__KMT2D|p.Q4156Nfs*5|1|0.15|ENSG00000167548|chr12:49032239-49032239|G/-|frameshift_variant;REV__KMT2D|p.R845Pfs*3|1|0.16|ENSG00000167548|chr12:49051149-49051150|-/G|frameshift_variant;REV__KMT2D|p.S2532Lfs*11|1|0.24|ENSG00000167548|chr12:49040177-49040177|G/-|frameshift_variant;REV__KMT2D|p.S4327Afs*57|1|0.44|ENSG00000167548|chr12:49031727-49031727|G/-|frameshift_variant;REV__KMT2D|p.T4629Hfs*18|1|0.31|ENSG00000167548|chr12:49030394-49030395|-/G|frameshift_variant;REV__KMT2D|p.T4629Pfs*11|1|0.27|ENSG00000167548|chr12:49030395-49030395|G/-|frameshift_variant;REV__KMT2D|p.V3089Wfs*30|1|0.12|ENSG00000167548|chr12:49038091-49038091|C/-|frameshift_variant;REV__KMT2D|p.Y2907Tfs*3|1|0.26|ENSG00000167548|chr12:49038637-49038637|A/-|frameshift_variant;REV__nc|ENSG00000167548|O14686-3|KMT2D	45.97224482568171	0.33106653400957564	4				NaN	NaN	0	NaN	11573	4058	15626
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15642	39.746	NaN	4373.8	30	0	364.35	0.214	+			9308	EIAREKVQF	9	69	560.3093925851564	1118.6042322371127	2	560.8077392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EIAREKVQF_	tr|U7T4Z4|U7T4Z4_FUSNURiboflavinbiosynthesisproteinRibDOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00613PE=3SV=1	37.81151784470057	0.4459294069877048	4				NaN	NaN	0	NaN	11579	4061	15641
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15643	39.75	NaN	4928.2	30	0	1150.2	0.106				-1	YCHCCCPR	8	76	549.6911787350665	1097.367804536933	2	549.69189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_YCHC(Carbamidomethyl (C))CC(Carbamidomethyl (C))PR_	ENST00000353836.9_1_19:51920668-51920960:-|nuORF;ENST00000357375.4_1_19:51920198-51920960:-|nuORF	20.481830146152948	0.8005983782650069	4				NaN	NaN	0	NaN	11580	4061	15641
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15644	39.752	NaN	3047.8	30	0	287.55	0.106	+			12036	FYITSRTQF	9	70	581.7973848271102	1161.5802167210204	2	581.7978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FYITSRTQF_	ENSG00000197122|ENST00000373578|SRC;nc|ENSG00000197122|P12931-2|SRC;nc|ENSG00000197122|P12931-3|SRC	63.53385203322761	0.18415635464017938	4				NaN	NaN	0	NaN	11581	4061	15641
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15645	39.754	NaN	4540.9	30	0	473.31	0.106	+			22506	KTPTTVVPL	9	64	478.29440927841154	954.5742656236231	2	478.294677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTPTTVVPL_	ENSG00000136451|ENST00000581208|VEZF1	75.04331003522576	0.118981335847003	4				NaN	NaN	0	NaN	11582	4061	15641
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15646	39.755	NaN	2588.2	30	0	149.18	0.106	+			45149	TVLQYVVGR	9	60	517.8025046353608	1033.5904563375216	2	517.8038330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TVLQYVVGR_	ENSG00000155561|ENST00000285968|NUP205;NUP205|p.S1260N|1|0.36|ENSG00000155561|chr7:135618419-135618419|G/A|missense_variant	56.72105179125745	0.24094814563026265	4				NaN	NaN	0	NaN	11583	4061	15641
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15647	39.757	NaN	1869.3	30	0	158.94	0.106	+			43852	TLVNLIVL	8	57	442.79398168617024	883.5734104391405	2	442.794189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TLVNLIVL_	ENSG00000105669|ENST00000262812|COPE;ENST00000595984.5_1_19:19010755-19014100:-|nuORF;ENST00000598969.5_1_19:19010490-19016602:-|nuORF;nc|ENSG00000105669|O14579-2|COPE;nc|ENSG00000105669|O14579-3|COPE	53.351449002276354	0.5676011784961348	4				NaN	NaN	0	NaN	11584	4061	15641
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15648	39.759	NaN	1854.3	30	0	238.32	0.035	+			18610	ISSDRSDSE	9	56	498.21812967887087	NaN	0	498.2182312011719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ISSDRSDSE_	ADD3-MXI1|1|fusion;ENSG00000119950|ENST00000332674|MXI1;nc|ENSG00000119950|P50539-2|MXI1;nc|ENSG00000119950|P50539-4|MXI1;nc|ENSG00000119950|P50539|MXI1	40.77816245573522	0.2702456086868081	4				NaN	NaN	0	NaN	11585	4061	15641
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15653	39.773	NaN	6018.6	30	0	582.24	0.214	+			24323	LFIATSQKF	9	69	527.7995400645568	1053.5845271959136	2	527.8006591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LFIATSQKF_	ENSG00000025770|ENST00000420993|NCAPH2;nc|ENSG00000025770|Q6IBW4-2|NCAPH2;nc|ENSG00000025770|Q6IBW4-4|NCAPH2	143.37361013837676	0.008897369944672323	4				NaN	NaN	0	NaN	11587	4064	15652
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15654	39.777	NaN	3466.8	30	0	477.03	0.106			+	45530	TYIGGPRAL	9	65	474.26844947907466	946.5223460249493	2	474.2689208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TYIGGPRAL_	REV__ENST00000376259.6_1_1:12227075-12248914:+|nuORF	31.954861631926434	0.5046124803899898	4				NaN	NaN	0	NaN	11588	4064	15652
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15655	39.779	NaN	3412.1	30	0	282.26	0.106	+			43087	TENILKAEL	9	71	515.7914048735734	1029.5682568139466	2	515.7925415039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TENILKAEL_	ENSG00000061987|ENST00000393630|MON2;ENST00000547095.5_1_12:62864501-62986526:+|nuORF;MON2|p.A1027Vfs*94|1|0.03|ENSG00000061987|chr12:62553043-62553044|-/TTCTTTTT|frameshift_variant;MON2|p.E989Nfs*2|1|0.16|ENSG00000061987|chr12:62552924-62552924|A/-|frameshift_variant;MON2|p.T1274Qfs*3|1|0.36|ENSG00000061987|chr12:62560894-62560894|T/-|frameshift_variant;MON2|p.V1435Afs*17|1|0.03|ENSG00000061987|chr12:62566430-62566431|-/CATCT|frameshift_variant;nc|ENSG00000061987|Q7Z3U7-2|MON2;nc|ENSG00000061987|Q7Z3U7-5|MON2;nc|ENSG00000061987|Q7Z3U7-6|MON2	79.48907831485694	0.09975780661107167	4				NaN	NaN	0	NaN	11589	4064	15652
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15656	39.781	NaN	2851.8	30	0	429.33	0.106	+			17410	IASDIVSRF	9	68	504.27920258950525	1006.5438522458105	2	504.2795715332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IASDIVSRF_	DOCK7|p.F1091Lfs*4|1|0.38|ENSG00000116641|chr1:62539572-62539572|A/-|frameshift_variant;DOCK7|p.F1836Dfs*12|1|0.05|ENSG00000116641|chr1:62477795-62477796|-/TGTC|frameshift_variant;ENSG00000116641|ENST00000635253|DOCK7;nc|ENSG00000116641|Q96N67-2|DOCK7;nc|ENSG00000116641|Q96N67-3|DOCK7;nc|ENSG00000116641|Q96N67-4|DOCK7;nc|ENSG00000116641|Q96N67-5|DOCK7;nc|ENSG00000116641|Q96N67-6|DOCK7	68.84614121027924	0.14577793175421136	4				NaN	NaN	0	NaN	11590	4064	15652
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15657	39.782	NaN	3848.8	30	0	350.94	0.106	+			22548	KTRSTTSSM	9	62	507.74763015598967	1013.4807073787794	2	507.7484130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_KTRSTTSSM(Oxidation (M))_	ENST00000511526.5_1_3:128616515-128622914:+|nuORF	42.396135135203025	0.392153681582562	4				NaN	NaN	0	NaN	11591	4064	15652
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15658	39.784	NaN	3204.1	30	0	281.29	0.106	+			44159	TQNPNYYNL	9	67	563.7612750660816	1125.507997198963	2	563.7620849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TQNPNYYNL_	ENSG00000144028|ENST00000323853|SNRNP200;ENST00000497539.5_1_2:96940752-96950410:-|nuORF	37.50817390946774	0.44948750990682723	4				NaN	NaN	0	NaN	11592	4064	15652
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15659	39.786	NaN	2897.6	30	0	211.61	0.035	+			42261	TAASLFKEM	9	70	499.25425483498185	996.4939567367637	2	499.2542724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TAASLFKEM_	ENSG00000142507|ENST00000270586|PSMB6;ENST00000575643.1_1_17:4700983-4701328:+|nuORF	98.58198989935565	0.04066992115528678	4				NaN	NaN	0	NaN	11593	4064	15652
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15669	39.808	NaN	34170	30	0	3177.6	0.214	+			39803	STLDIVLANK	10	89	537.3139132979819	NaN	0	537.3138427734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STLDIVLANK_	ENSG00000167325|ENST00000300738|RRM1	176.59839592901017	1.2077016721276324E-06	4				NaN	NaN	0	NaN	11600	4067	15668
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15670	39.811	NaN	8042.1	30	0	1094.5	0.106	+			42726	TDGKVFQF	8	63	471.2395010691828	940.4644492051656	2	471.2396240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TDGKVFQF_	ENSG00000114391|ENST00000394077|RPL24	108.08749611321984	0.24621691167378246	4				NaN	NaN	0	NaN	11601	4067	15668
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15671	39.813	NaN	7230.9	30	0	517.09	0.106	+			17671	IEKLAVEAL	9	69	493.29966419966695	984.5847754661339	2	493.2998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IEKLAVEAL_	ENSG00000166165|ENST00000348956|CKB	107.45493779368988	0.031594950556992824	4				NaN	NaN	0	NaN	11602	4067	15668
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15672	39.815	NaN	12977	30	0	1651.3	0.106	+			36617	SGFEGMFTK	9	71	502.23065299229296	1002.4467530513859	2	502.2309875488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SGFEGMFTK_	ENSG00000153201|ENST00000283195|RANBP2;ENSG00000153201|ENST00000283195|RANBP2;ENSG00000153201|ENST00000283195|RANBP2;RANBP2|p.C2737Vfs*35|1|0.18|ENSG00000153201|chr2:108772957-108772957|T/-|frameshift_variant;RANBP2|p.C2737Vfs*35|1|0.18|ENSG00000153201|chr2:108772957-108772957|T/-|frameshift_variant;RANBP2|p.C2737Vfs*35|1|0.18|ENSG00000153201|chr2:108772957-108772957|T/-|frameshift_variant;RANBP2|p.F3068Lfs*10|1|0.06|ENSG00000153201|chr2:108782692-108782692|T/-|frameshift_variant;RANBP2|p.F3068Lfs*10|1|0.06|ENSG00000153201|chr2:108782692-108782692|T/-|frameshift_variant;RANBP2|p.F3068Lfs*10|1|0.06|ENSG00000153201|chr2:108782692-108782692|T/-|frameshift_variant;RANBP2|p.H3114Sfs*18|1|0.33|ENSG00000153201|chr2:108782827-108782828|-/T|frameshift_variant;RANBP2|p.H3114Sfs*18|1|0.33|ENSG00000153201|chr2:108782827-108782828|-/T|frameshift_variant;RANBP2|p.H3114Sfs*18|1|0.33|ENSG00000153201|chr2:108782827-108782828|-/T|frameshift_variant;RANBP2|p.K1989Nfs*9|1|0.05|ENSG00000153201|chr2:108766505-108766506|-/TATCCTG|frameshift_variant;RANBP2|p.K1989Nfs*9|1|0.05|ENSG00000153201|chr2:108766505-108766506|-/TATCCTG|frameshift_variant;RANBP2|p.K1989Nfs*9|1|0.05|ENSG00000153201|chr2:108766505-108766506|-/TATCCTG|frameshift_variant;RANBP2|p.K2576Nfs*63|2|0.22|ENSG00000153201|chr2:108768262-108768262|A/-|frameshift_variant;RANBP2|p.K2576Nfs*63|2|0.22|ENSG00000153201|chr2:108768262-108768262|A/-|frameshift_variant;RANBP2|p.K2576Nfs*63|2|0.22|ENSG00000153201|chr2:108768262-108768262|A/-|frameshift_variant	143.37361013837676	0.008897369944672323	4				NaN	NaN	0	NaN	11603	4067	15668
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15673	39.817	NaN	3411.1	30	0	544.34	0.106			+	23621	LAPSRGSMTTY	11	75	600.2895397580315	1198.564526582863	2	600.2900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_LAPSRGSM(Oxidation (M))TTY_	REV__ENSG00000183317|ENST00000373048|EPHA10;REV__ENST00000446149.6_1_1:38181546-38201012:-|nuORF;REV__EPHA10|p.R869Gfs*10|1|0.12|ENSG00000183317|chr1:37719566-37719566|G/-|frameshift_variant;REV__nc|ENSG00000183317|Q5JZY3-3|EPHA10	96.0336014099291	0.0740748020614995	4				NaN	NaN	0	NaN	11604	4067	15668
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15674	39.819	NaN	5380.4	30	0	536.73	0.035	+			28217	NAVKDFTSF	9	69	514.7554986231801	1027.49644431316	2	514.7559814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NAVKDFTSF_	ENSG00000168769|ENST00000380013|TET2;nc|ENSG00000168769|Q6N021-2|TET2;nc|ENSG00000168769|Q6N021-3|TET2;TET2|p.M695Tfs*4|1|0.41|ENSG00000168769|chr4:105236026-105236029|TGTC/-|frameshift_variant;TET2|p.N202Tfs*5|1|0.32|ENSG00000168769|chr4:105234543-105234543|A/-|frameshift_variant;TET2|p.V1949Sfs*7|1|0.31|ENSG00000168769|chr4:105276348-105276349|-/A|frameshift_variant	70.8162118820467	0.13725933411854815	4				NaN	NaN	0	NaN	11605	4067	15668
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15675	39.819	NaN	3992.3	30	0	260.35	0.141	+			29288	NYIRITSEI	9	71	554.8033050244576	1107.592057115715	2	554.8036499023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NYIRITSEI_	ENSG00000089876|ENST00000284690|DHX32;nc|ENSG00000089876|Q7L7V1-2|DHX32	85.86182877749512	0.07653218437724067	4				NaN	NaN	0	NaN	11606	4067	15668
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15682	39.838	NaN	11999	30	0	2782.3	0.214	+			30612	QARIEIESF	9	67	546.7873909743118	1091.5602290154236	2	546.7883911132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QARIEIESF_	ENSG00000044574|ENST00000324460|HSPA5;HSPA5|p.N522Ifs*12|1|0.36|ENSG00000044574|chr9:125236992-125236992|T/-|frameshift_variant	106.68306549817024	0.032382560583716295	4				NaN	NaN	0	NaN	11610	4070	15681
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15683	39.841	NaN	6058.5	30	0	1381.2	0.106				-1	 	0	57	485.7997341418229	969.5849153504458	2	485.80023193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11611	4070	15681
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15684	39.843	NaN	3203.7	30	0	294.58	0.106	+			27367	MKASEATVP	9	71	475.2360657486574	948.4575785641148	2	475.2366638183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))KASEATVP_	ENST00000319551.12_1_7:149412416-149417105:+|nuORF	60.97194046774394	0.20551255781574032	4				NaN	NaN	0	NaN	11612	4070	15681
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15685	39.845	NaN	5454.9	30	0	1187.2	0.106			+	51115	YMLKHTEIF	9	67	591.3031943961461	1180.591835859092	2	591.8095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YMLKHTEIF_	REV__ENSG00000159459|ENST00000290650|UBR1;REV__ENST00000568782.1_1_15:43295571-43307995:-|nuORF;REV__UBR1|p.P1614Hfs*32|1|0.22|ENSG00000159459|chr15:42952443-42952443|G/-|frameshift_variant	65.80317337860623	0.1652391959156183	4				NaN	NaN	0	NaN	11613	4070	15681
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15686	39.847	NaN	1923.6	30	0	283.7	0.106	+			13886	GRCVSPDT	8	47	417.6923958435967	833.3702387539935	2	417.6923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GRCVSPDT_	ENSG00000157890|ENST00000395614|MEGF11;MEGF11|p.G421Afs*41|1|0.41|ENSG00000157890|chr15:65957572-65957572|C/-|frameshift_variant;MEGF11|p.G599Wfs*42|1|0.13|ENSG00000157890|chr15:65922851-65922852|-/G|frameshift_variant;nc|ENSG00000157890|A6BM72-2|MEGF11;nc|ENSG00000157890|A6BM72-3|MEGF11;nc|ENSG00000157890|A6BM72|MEGF11	30.503639358989545	0.7238069182250283	4				NaN	NaN	0	NaN	11614	4070	15681
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15687	39.848	NaN	2043.8	30	0	244.59	0.106			+	27323	MHNCGVNKEIC	11	64	624.2691859507387	1246.5238189682773	2	624.270263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MHNCGVNKEIC_	REV__ARIH2|p.G308V|1|0.29|ENSG00000177479|chr3:48974851-48974851|G/T|missense_variant	35.15202426646627	0.6210751305041943	4				NaN	NaN	0	NaN	11615	4070	15681
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15688	39.85	NaN	3196.7	30	0	432.86	0.035				-1	LTCTGVIWA	9	63	510.76119816467724	1019.5078433961545	2	510.7626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_LTC(Carbamidomethyl (C))TGVIWA_	ENSG00000183722|ENST00000379589|LHFPL6;LHFP|p.V42Cfs*20|1|0.13|ENSG00000183722|chr13:39601093-39601093|C/-|frameshift_variant	31.954861631926434	0.5046124803899898	4				NaN	NaN	0	NaN	11616	4070	15681
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15696	39.869	NaN	42045	30	0	5072.7	0.214	+			40067	STNNWVLIK	9	99	537.8013129052275	NaN	0	537.8017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STNNWVLIK_	ENSG00000065000|ENST00000643116|AP3D1;nc|ENSG00000065000|O14617-4|AP3D1;nc|ENSG00000065000|O14617|AP3D1	106.68306549817024	0.012692596758972883	4				NaN	NaN	0	NaN	11621	4073	15695
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15697	39.872	NaN	5065.6	30	0	619.99	0.106	+			21421	KMVKEDKIE	9	67	560.3093925851564	1118.6042322371127	2	560.3121337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KMVKEDKIE_	ENSG00000111300|ENST00000261745|NAA25;ENST00000549711.5_1_12:112487373-112518932:-|nuORF;ENST00000552527.5_1_12:112478245-112546577:-|nuORF;NAA25|p.E958Sfs*3|1|0.51|ENSG00000111300|chr12:112029578-112029578|C/-|frameshift_variant;NAA25|p.V720Gfs*6|1|0.14|ENSG00000111300|chr12:112043716-112043717|-/C|frameshift_variant;nc|ENSG00000111300|Q14CX7-2|NAA25	54.722347961057174	0.257609425301511	4				NaN	NaN	0	NaN	11622	4073	15695
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15698	39.874	NaN	4082.2	30	0	311.93	0.106	+			6621	AYQSVQETW	9	71	556.2557960064032	1110.4970390796063	2	556.2571411132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AYQSVQETW_	ENSG00000204385|ENST00000229729|SLC44A4;nc|ENSG00000204385|Q53GD3-3|SLC44A4;nc|ENSG00000204385|Q53GD3-4|SLC44A4;SLC44A4|p.F618Sfs*25|1|0.43|ENSG00000204385|chr6:31864889-31864889|A/-|frameshift_variant;SLC44A4|p.G398Afs*7|1|0.29|ENSG00000204385|chr6:31869197-31869197|G/-|frameshift_variant;SLC44A4|p.S619Lfs*9|1|0.31|ENSG00000204385|chr6:31864888-31864889|-/A|frameshift_variant	118.74307786436346	0.02196067127630568	4				NaN	NaN	0	NaN	11623	4073	15695
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15699	39.876	NaN	3290.9	30	0	355.68	0.106			+	-1	QKGVQCSK	8	66	467.74208510264606	933.4696172720921	2	467.7428283691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_QKGVQC(Carbamidomethyl (C))SK_	REV__ENST00000443413.1_1_X:91931520-91931646:-|nuORF	35.61828744233558	0.6843154725607303	4				NaN	NaN	0	NaN	11624	4073	15695
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15700	39.878	NaN	2337.8	30	0	267.06	0.106	+			23025	KVSRLECRGG	10	50	368.8693075576631	1103.5860932731894	3	368.8698425292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KVSRLECRGG_	ENSG00000145147|ENST00000504154|SLIT2;ENST00000508541.1_1_4:20618510-20620629:+|nuORF;nc|ENSG00000145147|O94813-2|SLIT2;nc|ENSG00000145147|O94813-3|SLIT2	27.047317107675042	0.6589519614906109	4				NaN	NaN	0	NaN	11625	4073	15695
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15701	39.879	NaN	4498.1	30	0	503.74	0.106			+	20559	KFRIITTE	8	68	504.2974505011629	1006.5803480691259	2	504.2975158691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KFRIITTE_	REV__sp|P16810|IR12_HCMVAUncharacterizedproteinIRL12OS=Humancytomegalovirus(strainAD169)OX=10360PE=4SV=1	31.954861631926434	0.7126016770032289	4				NaN	NaN	0	NaN	11626	4073	15695
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15702	39.881	NaN	1784.7	30	0	291.78	0.038				-1	LPVDEFLPIM	10	63	595.3137604880469	1188.6129680428937	2	595.8165283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_LPVDEFLPIM(Oxidation (M))_	ENSG00000167123|ENST00000372838|CERCAM;nc|ENSG00000167123|Q5T4B2-2|CERCAM	20.94693142431847	0.7087701759873708	4				NaN	NaN	0	NaN	11627	4073	15695
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15709	39.899	NaN	10271	30	0	2915.4	0.214	+			8365	EALPMDREV	9	79	530.2606026802854	1058.5066524273707	2	530.26171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EALPMDREV_	SYK|p.T345R|1|0.3|ENSG00000165025|chr9:90874702-90874702|C/G|missense_variant	35.15202426646627	0.4747332964206883	4				NaN	NaN	0	NaN	11631	4076	15708
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15710	39.903	NaN	6399.7	30	0	722.67	0.035	+			269	AAMYKSLEL	9	75	513.2698902495961	1024.525227565992	2	513.27099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAMYKSLEL_	ENSG00000273749|ENST00000617928|CYFIP1;KBTBD2-CYFIP1|1|fusion;nc|ENSG00000273749|Q7L576-2|CYFIP1	85.16082228582465	0.07850854922700509	4				NaN	NaN	0	NaN	11632	4076	15708
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15717	39.921	NaN	4314.9	30	0	494.98	0.215				-1	RGDCTSLQ	8	60	468.71361603539685	935.4126791375937	2	468.2364807128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_RGDC(Carbamidomethyl (C))TSLQ_	ENSG00000145390|ENST00000692078|USP53	25.57405402267927	0.7618694492699909	4				NaN	NaN	0	NaN	11636	4079	15716
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15718	39.925	NaN	1384	30	0	157.6	0.034			+	7793	DPHMGLFL	8	49	465.2325112267578	NaN	0	465.2320861816406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DPHMGLFL_	REV__ENSG00000070614|ENST00000261797|NDST1;REV__nc|ENSG00000070614|P52848-3|NDST1	28.2542754592877	1.7418937515398478	4				NaN	NaN	0	NaN	11637	4079	15716
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15725	39.941	NaN	8698	30	0	1575.5	0.214	+			28867	NPYRDLQIY	9	70	591.3031943961461	1180.591835859092	2	591.3011474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NPYRDLQIY_	ENSG00000197879|ENST00000648651|MYO1C;MYO1C|p.V213Wfs*56|1|0.56|ENSG00000197879|chr17:1480877-1480877|G/-|frameshift_variant;nc|ENSG00000197879|O00159-2|MYO1C;nc|ENSG00000197879|O00159-3|MYO1C	75.04331003522576	0.118981335847003	4				NaN	NaN	0	NaN	11641	4082	15724
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15726	39.945	NaN	14219	30	0	1673.8	0.106				-1	 	0	77	537.268170749499	1072.5217885657978	2	537.268798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11642	4082	15724
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15727	39.947	NaN	4618.4	30	0	339.68	0.106	+			6506	AYAIIKEEL	9	72	525.2967563103205	1048.5789596874408	2	525.2969360351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AYAIIKEEL_	ENSG00000156802|ENST00000287394|ATAD2;ENST00000517666.5_1_8:124333376-124408650:-|nuORF	98.62937762414208	0.04060045538121712	4				NaN	NaN	0	NaN	11643	4082	15724
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15728	39.948	NaN	4042.9	30	0	317.09	0.106				-1	YKRTMMSF	8	76	540.252911115778	1078.491269298356	2	540.2529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_YKRTM(Oxidation (M))MSF_	ENSG00000204406|ENST00000642680|MBD5;nc|ENSG00000204406|Q9P267|MBD5	38.80614096846853	0.6637206697844082	4				NaN	NaN	0	NaN	11644	4082	15724
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15729	39.95	NaN	950.41	30	0	41.816	0.106			+	-1	TCQDLAYHNSP	11	54	653.2789916992188	NaN	0	653.2789916992188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_TC(Carbamidomethyl (C))QDLAYHNSP_	REV__ENSG00000187144|ENST00000335496|SPATA21;REV__nc|ENSG00000187144|Q7Z572-2|SPATA21	26.063383197487333	0.44926255568796863	4				NaN	NaN	0	NaN	11645	4082	15724
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15730	39.952	NaN	2941.8	30	0	193.74	0.034			+	37498	SLLAIVSQM	9	73	481.2731158147159	960.5316786962318	2	481.7731628417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLLAIVSQM_	REV__ENSG00000168038|ENST00000301831|ULK4	64.20726635412375	0.17854274437659667	4				NaN	NaN	0	NaN	11646	4082	15724
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15740	39.974	NaN	13665	30	0	3712.3	0.214			+	7475	DGARLSNM	8	57	440.2029732319786	878.3913935307572	2	440.2032470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_DGARLSNM(Oxidation (M))_	REV__nc|ENSG00000211942|P01766|IGHV3-13	85.35947970620816	0.2915182781752196	4				NaN	NaN	0	NaN	11653	4085	15739
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15741	39.977	NaN	2659.5	30	0	537.06	0.106				-1	 	0	41	336.5337320249258	1006.5793666749776	3	336.5340881347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11654	4085	15739
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15742	39.979	NaN	2353.3	30	0	215.96	0.106				-1	LQCRKENLM	9	67	604.3010717652572	1206.5875905973144	2	604.302001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_LQC(Carbamidomethyl (C))RKENLM(Oxidation (M))_	SULT1E1|p.E82Q|1|0.14|ENSG00000109193|chr4:69855328-69855328|C/G|missense_variant	42.396135135203025	0.392153681582562	4				NaN	NaN	0	NaN	11655	4085	15739
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15743	39.981	NaN	3481.2	30	0	304.24	0.106			+	45659	TYVKDNASF	9	67	522.7524711408141	1043.4903893484282	2	522.7543334960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TYVKDNASF_	REV__ENSG00000079739|ENST00000371084|PGM1;REV__nc|ENSG00000079739|P36871-2|PGM1;REV__nc|ENSG00000079739|P36871-3|PGM1;REV__PGM1|p.A512Pfs*33|1|0.23|ENSG00000079739|chr1:63654398-63654398|G/-|frameshift_variant	40.77816245573522	0.41113185337114944	4				NaN	NaN	0	NaN	11656	4085	15739
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15744	39.983	NaN	1779.8	30	0	245.97	0.106	+			23263	KYIYKDGVT	9	68	543.7957509436684	NaN	0	543.7957763671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KYIYKDGVT_	tr|U7ST62|U7ST62_FUSNUPhophatidylinositol-4-phosphate5-kinaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01303PE=4SV=1	40.77816245573522	0.2702456086868081	4				NaN	NaN	0	NaN	11657	4085	15739
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15745	39.985	NaN	2205.9	30	0	250.65	0.037	+			1714	AGVRVRTVVSG	11	51	367.55740082412404	NaN	0	367.5576171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AGVRVRTVVSG_	ENSG00000179051|ENST00000375436|RCC2;RCC2|p.A423Qfs*56|1|0.13|ENSG00000179051|chr1:17413120-17413120|T/-|frameshift_variant	29.550750289552195	0.43372083775723597	4				NaN	NaN	0	NaN	11658	4085	15739
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15746	39.985	NaN	1997.9	30	0	104.29	0.141			+	-1	QYRAWEMK	8	65	564.2706494514765	NaN	0	564.3004760742188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_QYRAWEM(Oxidation (M))K_	REV__ENST00000526019.5_1_6:130363884-130363944:+|nuORF	44.116797842482775	1.7418937515398478	4				NaN	NaN	0	NaN	11659	4085	15739
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15753	40.004	NaN	3520.4	30	0	394.22	0.214	+			760	AEEKLPMTL	9	72	516.2748991401542	1030.5352453471082	2	516.2755737304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEEKLPMTL_	ENSG00000165630|ENST00000378572|PRPF18	85.86182877749512	0.07653218437724067	4				NaN	NaN	0	NaN	11663	4088	15752
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15754	40.007	NaN	3874.3	30	0	318.56	0.106			+	42704	TDASTDVIIF	10	77	541.2747290135824	1080.5349050939647	2	541.2747192382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TDASTDVIIF_	REV__tr|U7STI5|U7STI5_FUSNUPeptide/nickeltransportsystemsubstrate-bindingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01497PE=4SV=1	79.45101966838831	0.2001060845487004	4				NaN	NaN	0	NaN	11664	4088	15752
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15755	40.009	NaN	3535	30	0	160.57	0.106	+			37364	SLFITTINK	9	61	518.8045788929762	1035.5946048527524	2	518.8057250976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLFITTINK_	ENSG00000132423|ENST00000254759|COQ3	52.936696900407355	0.27249468807391813	4				NaN	NaN	0	NaN	11665	4088	15752
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15756	40.011	NaN	1710.3	30	0	545.16	0.106			+	46537	VFCYGRPQGE	10	50	578.2656917276339	1154.5168305220677	2	578.2662963867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VFCYGRPQGE_	REV__ENSG00000119446|ENST00000417201|RBM18	29.14955571784316	0.6417842315402807	4				NaN	NaN	0	NaN	11666	4088	15752
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15757	40.013	NaN	3792.3	30	0	325.46	0.106				-1	 	0	54	490.29423231713326	978.5739117010665	2	490.29461669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11667	4088	15752
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15758	40.014	NaN	2148.3	30	0	200.4	0.106			+	29904	PLPPGATARY	10	61	521.7875562996531	NaN	0	521.7880859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PLPPGATARY_	REV__ENST00000368124.8_1_1:159170782-159171025:+|nuORF	37.15910966729921	0.3781637092648983	4				NaN	NaN	0	NaN	11668	4088	15752
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15759	40.016	NaN	1655.7	30	0	245.35	0.032				-1	CGSSCCSCCW	10	45	384.7719450320824	NaN	0	384.7720947265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C)	_CGSSC(Carbamidomethyl (C))C(Carbamidomethyl (C))SCCW_	ENST00000228741.7_1_12:96588285-96617411:+|nuORF	1.8869224993972666	0.4201028297492154	4				NaN	NaN	0	NaN	11669	4088	15752
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15764	40.031	NaN	8746.4	30	0	992.56	0.214			+	-1	NKVTCTYLG	9	76	528.2629090206134	1054.5112651080267	2	528.2636108398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_NKVTC(Carbamidomethyl (C))TYLG_	REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-10|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-13|TTN;REV__nc|ENSG00000155657|Q8WZ42-2|TTN;REV__nc|ENSG00000155657|Q8WZ42-3|TTN;REV__nc|ENSG00000155657|Q8WZ42-4|TTN;REV__nc|ENSG00000155657|Q8WZ42-5|TTN;REV__nc|ENSG00000155657|Q8WZ42-7|TTN;REV__nc|ENSG00000155657|Q8WZ42-8|TTN;REV__nc|ENSG00000155657|Q8WZ42-9|TTN;REV__nc|ENSG00000155657|Q8WZ42|TTN;REV__TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant	52.936696900407355	0.27249468807391813	4				NaN	NaN	0	NaN	11671	4091	15763
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15765	40.034	NaN	4068.6	30	0	413.31	0.106	+			19130	IYLYHRSF	8	73	549.7922917782374	1097.5700306232748	2	549.795166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IYLYHRSF_	ENSG00000153066|ENST00000283033|TXNDC11;nc|ENSG00000153066|Q6PKC3-3|TXNDC11;nc|ENSG00000153066|Q6PKC3|TXNDC11	76.84663266511073	0.3498490246073164	4				NaN	NaN	0	NaN	11672	4091	15763
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15766	40.036	NaN	2795.2	30	0	205.93	0.106	+			15789	GVVAVLLTK	9	56	450.299266260058	898.583979586916	2	450.2999267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GVVAVLLTK_	ENSG00000169710|ENST00000306749|FASN;FASN|p.A413Hfs*39|2|0.47|ENSG00000169710|chr17:82091478-82091478|G/-|frameshift_variant	101.60071028292904	0.0375685401170269	4				NaN	NaN	0	NaN	11673	4091	15763
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15767	40.038	NaN	3137.5	30	0	273.34	0.106	+			35243	SALGYLHSL	9	66	480.7604475165052	959.5063420998105	2	481.27264404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SALGYLHSL_	ENSG00000118515|ENST00000367858|SGK1;ENST00000367855.7_1_6:134492115-134495951:-|nuORF;ENST00000474427.6_1_6:134493798-134493948:-|nuORF;ENST00000477460.6_1_6:134491408-134493948:-|nuORF;ENST00000524764.1_1_6:134493798-134494280:-|nuORF;nc|ENSG00000118515|O00141-3|SGK1;nc|ENSG00000118515|O00141-4|SGK1;nc|ENSG00000118515|O00141-5|SGK1;nc|ENSG00000118515|O00141|SGK1	62.107414245175825	0.1960472003779324	4				NaN	NaN	0	NaN	11674	4091	15763
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15768	40.04	NaN	2776.6	30	0	164.25	0.106			+	10689	EYTQCIYAL	9	76	552.2596452436422	NaN	0	552.2576904296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EYTQCIYAL_	REV__ENSG00000144580|ENST00000273064|CNOT9;REV__ENST00000473626.1_1_2:219457053-219457431:+|nuORF;REV__nc|ENSG00000144580|Q92600-2|CNOT9;REV__nc|ENSG00000144580|Q92600-3|CNOT9	45.9519527083369	0.2345902329052062	4				NaN	NaN	0	NaN	11675	4091	15763
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15769	40.042	NaN	934.81	30	0	82.005	0.106			+	28536	NILLEIPNN	9	38	347.19859649609526	NaN	0	347.1984558105469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NILLEIPNN_	REV__ENSG00000106236|ENST00000265634|NPTX2	24.20275056022122	0.35506675290109213	4				NaN	NaN	0	NaN	11676	4091	15763
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15770	40.043	NaN	1728.7	30	0	163.52	0.034			+	24709	LHHDSALL	8	55	453.24463256221117	904.4747121912224	2	453.2449645996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LHHDSALL_	REV__ENSG00000160218|ENST00000291574|TRAPPC10;REV__TRAPPC10|p.P1021Lfs*23|1|0.56|ENSG00000160218|chr21:44094123-44094123|C/-|frameshift_variant	44.53106598305862	0.628196326904373	4				NaN	NaN	0	NaN	11677	4091	15763
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15778	40.062	NaN	26250	30	0	6247	0.214				-1	 	0	83	510.7892859083667	1019.5640188835334	2	510.78973388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11682	4094	15777
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15779	40.065	NaN	3946.4	30	0	988.77	0.106				-1	 	0	51	433.75210568107997	865.48965842896	2	433.7524108886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11683	4094	15777
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15780	40.067	NaN	3850.4	30	0	603.18	0.106	+			47383	VPIPPVKGEE	10	66	532.8027024047784	1063.5908518763567	2	532.803955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VPIPPVKGEE_	ENST00000539446.5_1_12:120648741-120648861:+|nuORF	39.252832667884924	0.5560298534376815	4				NaN	NaN	0	NaN	11684	4094	15777
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15781	40.069	NaN	2853.2	30	0	238.95	0.106			+	32085	QSEERVLAY	9	64	547.7781646439144	NaN	0	547.7783203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QSEERVLAY_	REV__ENSG00000198812|ENST00000361484|LRRC10	35.61828744233558	0.29773779453147337	4				NaN	NaN	0	NaN	11685	4094	15777
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15782	40.071	NaN	2266.8	30	0	326.41	0.106				-1	STLVNVIMQQ	10	67	574.8021678241619	1147.5897827151236	2	574.803466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_STLVNVIM(Oxidation (M))QQ_	DNAH7|p.I2732Lfs*15|1|0.34|ENSG00000118997|chr2:195857597-195857597|T/-|frameshift_variant;DNAH7|p.I759Sfs*5|1|0.12|ENSG00000118997|chr2:195960876-195960876|T/-|frameshift_variant;DNAH7|p.K721Rfs*5|1|0.35|ENSG00000118997|chr2:195969991-195969991|T/-|frameshift_variant;DNAH7|p.P1564Tfs*5|1|0.25|ENSG00000118997|chr2:195895182-195895183|-/T|frameshift_variant;DNAH7|p.P2310Tfs*50|1|0.14|ENSG00000118997|chr2:195864727-195864728|-/T|frameshift_variant;DNAH7|p.Q347Afs*6|1|0.31|ENSG00000118997|chr2:196001810-196001811|-/T|frameshift_variant;DNAH7|p.S3691Afs*11|1|0.37|ENSG00000118997|chr2:195775977-195775977|T/-|frameshift_variant;DNAH7|p.T2935Ifs*12|1|0.24|ENSG00000118997|chr2:195845142-195845143|AG/-|frameshift_variant;DNAH7|p.V827*|1|0.31|ENSG00000118997|chr2:195960673-195960673|T/-|frameshift_variant;ENSG00000118997|ENST00000312428|DNAH7;nc|ENSG00000118997|Q8WXX0-4|DNAH7	31.529811441608018	0.6223461015008678	4				NaN	NaN	0	NaN	11686	4094	15777
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15783	40.073	NaN	2617	30	0	236.09	0.033				-1	 	0	57	446.23172807042823	890.4489032076565	2	446.23211669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11687	4094	15777
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15784	40.073	NaN	2198.2	30	0	305.56	0.141			+	31186	QGPGQERPSGC	11	66	558.2480780152285	1114.481603097257	2	558.2493896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QGPGQERPSGC_	REV__ENST00000303941.3_1_11:113266903-113268703:+|nuORF	32.75053402867276	0.6462648045997152	4				NaN	NaN	0	NaN	11688	4094	15777
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15791	40.093	NaN	8964	30	0	1735.4	0.214				-1	 	0	79	501.25890313372963	1000.5032533342593	2	501.2594299316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11692	4097	15790
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15792	40.097	NaN	5102.7	30	0	889.54	0.106			+	38653	SSIGSILKPY	10	77	532.8027024047784	1063.5908518763567	2	532.803466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSIGSILKPY_	REV__tr|U7T1Y4|U7T1Y4_FUSNUSodium:protonantiporterOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00685PE=4SV=1	44.377184641726394	0.5088115166961078	4				NaN	NaN	0	NaN	11693	4097	15790
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15793	40.098	NaN	3465.3	30	0	548	0.106	+			36403	SETLLRVM	8	61	474.76219353997215	947.5098341467443	2	474.7624816894531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SETLLRVM_	ENSG00000052749|ENST00000370992|RRP12;ENST00000479317.1_1_10:99147891-99148113:-|nuORF;nc|ENSG00000052749|Q5JTH9-2|RRP12;nc|ENSG00000052749|Q5JTH9-3|RRP12	68.78682469695295	0.41700713582915416	4				NaN	NaN	0	NaN	11694	4097	15790
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15794	40.1	NaN	3780.3	30	0	204.35	0.106	+			37797	SMALNEKQI	9	74	525.2682313833675	1048.521909833535	2	525.2686767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_SM(Oxidation (M))ALNEKQI_	ENSG00000198873|ENST00000392870|GRK5;GRK5|p.G227W|1|0.16|ENSG00000198873|chr10:119431468-119431468|G/T|missense_variant	61.691277971877994	0.19951612995419254	4				NaN	NaN	0	NaN	11695	4097	15790
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15795	40.102	NaN	2525.6	30	0	173.76	0.106	+			23692	LATCSCLGL	9	59	469.2270110044058	936.4394690756117	2	469.2275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_LATC(Carbamidomethyl (C))SCLGL_	ENST00000464265.5_1_21:38439600-38439633:-|nuORF	65.80317337860623	0.1652391959156183	4				NaN	NaN	0	NaN	11696	4097	15790
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15796	40.104	NaN	2217.4	30	0	352.07	0.106	+			27119	MAPLGNTPM	9	48	466.22199714891786	930.4294413646357	2	466.2225036621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MAPLGNTPM_	ENSG00000113282|ENST00000411809|CLINT1;ENST00000522381.1_1_5:157214656-157215007:-|nuORF;nc|ENSG00000113282|Q14677-2|CLINT1;nc|ENSG00000113282|Q14677-3|CLINT1	51.33545320467046	0.2872990594074956	4				NaN	NaN	0	NaN	11697	4097	15790
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15797	40.106	NaN	1711	30	0	169.83	0.035			+	9305	EHYSRLIA	8	56	494.76632903775305	NaN	0	494.7658996582031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EHYSRLIA_	REV__RAD9A|p.V176A|1|0.11|ENSG00000172613|chr11:67395793-67395793|T/C|missense_variant	33.51558372728122	1.7418937515398478	4				NaN	NaN	0	NaN	11698	4097	15790
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15805	40.124	NaN	5356.5	30	0	692.68	0.214			+	32425	QVHVRSRSGGP	11	73	590.3212954637784	1178.6280379943566	2	590.3218383789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QVHVRSRSGGP_	REV__ENST00000349305.8_1_6:135239555-135263608:-|nuORF	37.59989570853033	0.5907838038483115	4				NaN	NaN	0	NaN	11703	4100	15804
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15806	40.128	NaN	2421.2	30	0	217.79	0.106	+			8600	ECHTLLSCKV	10	70	566.777388406429	1131.540223879658	2	566.7781982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ECHTLLSCKV_	ENSG00000158615|ENST00000367188|PPP1R15B	40.77816245573522	0.5419747034533848	4				NaN	NaN	0	NaN	11704	4100	15804
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15807	40.129	NaN	2030.7	30	0	265.7	0.106	+			48191	VTAIVNKPL	9	58	477.80294223703567	953.5913315408714	2	477.80242919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTAIVNKPL_	ENSG00000104369|ENST00000342232|JPH1	56.72105179125745	0.24094814563026265	4				NaN	NaN	0	NaN	11705	4100	15804
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15808	40.131	NaN	2945.2	30	0	381.28	0.106	+			11447	FMPYRPVV	8	58	504.77049733703035	1007.5264417408607	2	504.7713623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FMPYRPVV_	ENSG00000168505|ENST00000306318|GBX2;GBX2|p.L55dup|1|0.27|ENSG00000168505|chr2:236167805-236167806|-/GCA|inframe_insertion	44.53106598305862	0.628196326904373	4				NaN	NaN	0	NaN	11706	4100	15804
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15809	40.133	NaN	2856	30	0	717.51	0.106	+			26124	LSPLHSLTPY	10	64	564.3073903322913	1126.6002277313826	2	564.3086547851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSPLHSLTPY_	ENSG00000162408|ENST00000377705|NOL9	34.172542307311794	0.6007644933930345	4				NaN	NaN	0	NaN	11707	4100	15804
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15810	40.135	NaN	2270.1	30	0	123.27	0.106	+			11135	FGAFHSPAL	9	64	473.7421581619595	945.469763390719	2	473.7420959472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FGAFHSPAL_	EHD2|p.P90Lfs*76|1|0.35|ENSG00000024422|chr19:47716876-47716876|G/-|frameshift_variant;ENSG00000024422|ENST00000263277|EHD2	57.81127852772723	0.2318599694398087	4				NaN	NaN	0	NaN	11708	4100	15804
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15811	40.137	NaN	2219.7	30	0	224.82	0.035				-1	 	0	57	495.26864406431196	494.26136759771197	1	495.2694396972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11709	4100	15804
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15816	40.151	NaN	3337.4	30	0	315.76	0.214	+			26076	LSLTEGLGLG	10	64	480.27436010145453	958.5341672697091	2	480.27362060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSLTEGLGLG_	ENSG00000184350|ENST00000389832|MRGPRE;MRGPRE|p.Q208Sfs*103|1|0.15|ENSG00000184350|chr11:3228178-3228178|G/-|frameshift_variant	56.72105179125745	0.3956618550748046	4				NaN	NaN	0	NaN	11711	4103	15815
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15817	40.155	NaN	3116.6	30	0	372.03	0.106				-1	RSLLVCSSDY	10	72	600.2895397580315	1198.564526582863	2	600.290283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_RSLLVC(Carbamidomethyl (C))SSDY_	KLHL34|p.A48V|1|0.19|ENSG00000185915|chrX:21657646-21657646|G/A|missense_variant	52.936696900407355	0.4300801048568001	4				NaN	NaN	0	NaN	11712	4103	15815
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15818	40.157	NaN	2408.3	30	0	447.62	0.106	+			11966	FVLWAPAIL	9	67	515.3091421335722	1028.6037313339443	2	515.310302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FVLWAPAIL_	ENSG00000133019|ENST00000676153|CHRM3;ENSG00000168539|ENST00000306960|CHRM1;ENSG00000180720|ENST00000682254|CHRM4;nc|ENSG00000168539|P11229-2|CHRM1	45.9519527083369	0.35044536499095585	4				NaN	NaN	0	NaN	11713	4103	15815
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15819	40.158	NaN	2974.8	30	0	448.72	0.106			+	7790	DPHEKMHLA	9	63	539.2620213183876	1076.5094897035751	2	539.2630004882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DPHEKMHLA_	REV__ENSG00000181449|ENST00000325404|SOX2;REV__ENSG00000182968|ENST00000330949|SOX1;REV__SOX1|p.R108C|1|0.16|ENSG00000182968|chr13:112067980-112067980|C/T|missense_variant	29.14955571784316	0.5308295550522326	4				NaN	NaN	0	NaN	11714	4103	15815
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15820	40.16	NaN	1345.3	30	0	212.1	0.106	+			6537	AYGFVARI	8	45	448.75263419836176	895.4907154635235	2	448.7530517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AYGFVARI_	ENSG00000110799|ENST00000261405|VWF;ENST00000321023.5_1_12:6204574-6232125:-|nuORF;nc|ENSG00000110799|P04275-2|VWF;VWF|p.D1472Tfs*53|1|0.21|ENSG00000110799|chr12:6019004-6019004|C/-|frameshift_variant	83.28718786952967	0.2977916691876266	4				NaN	NaN	0	NaN	11715	4103	15815
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15821	40.162	NaN	1268.5	30	0	103.6	0.106	+			27027	LYSVQNKV	8	54	475.7684045445097	949.5222561558194	2	475.7687683105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LYSVQNKV_	FAM118A|p.P252Q|1|0.04|ENSG00000100376|chr22:45332528-45332528|C/A|missense_variant	53.351449002276354	0.5676011784961348	4				NaN	NaN	0	NaN	11716	4103	15815
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15822	40.164	NaN	1426.7	30	0	144.15	0.035			+	26631	LVAPTPLSKN	10	63	520.3114856924874	NaN	0	520.3118286132812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LVAPTPLSKN_	REV__ENSG00000129116|ENST00000505667|PALLD;REV__nc|ENSG00000129116|Q8WX93-2|PALLD;REV__nc|ENSG00000129116|Q8WX93-3|PALLD;REV__nc|ENSG00000129116|Q8WX93-5|PALLD;REV__nc|ENSG00000129116|Q8WX93-8|PALLD;REV__nc|ENSG00000129116|Q8WX93|PALLD	35.15202426646627	0.38475398474706135	4				NaN	NaN	0	NaN	11717	4103	15815
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15829	40.18	NaN	4344.8	30	0	827.79	0.214				-1	 	0	67	506.2783572532993	1010.5421615733986	2	506.2788391113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11721	4106	15828
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15830	40.184	NaN	2438.8	30	0	112.83	0.106	+			36611	SGFAGVYFEK	10	63	552.7702102514003	1103.5258675696005	2	552.77099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SGFAGVYFEK_	ENSG00000102100|ENST00000247138|SLC35A2;ENSG00000117620|ENST00000533028|SLC35A3;ENSG00000164414|ENST00000369552|SLC35A1;nc|ENSG00000102100|P78381-2|SLC35A2;nc|ENSG00000102100|P78381-4|SLC35A2;nc|ENSG00000102100|P78381-5|SLC35A2;nc|ENSG00000283761|Q9Y2D2-2|SLC35A3;nc|ENSG00000283761|Q9Y2D2-3|SLC35A3	50.033510581677724	0.4566913063131936	4				NaN	NaN	0	NaN	11722	4106	15828
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15831	40.186	NaN	2366.7	30	0	167.13	0.106			+	28613	NKSFGHLNK	9	67	522.7818755762104	1043.5491982192207	2	522.7833251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NKSFGHLNK_	REV__FAM120B|p.Y298Ifs*24|1|0.3|ENSG00000112584|chr6:170318277-170318277|T/-|frameshift_variant	60.11826168202944	0.21262886028301267	4				NaN	NaN	0	NaN	11723	4106	15828
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15832	40.187	NaN	1715.9	30	0	232.88	0.106	+			42769	TEAAIRLGL	9	50	472.28143573511124	NaN	0	472.2813415527344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TEAAIRLGL_	ENSG00000117155|ENST00000342203|SSX2IP;ENST00000459708.1_1_1:85121010-85121631:-|nuORF;nc|ENSG00000117155|Q9Y2D8-2|SSX2IP;nc|ENSG00000117155|Q9Y2D8-3|SSX2IP;SSX2IP|p.Q516Gfs*48|1|0.16|ENSG00000117155|chr1:84650487-84650488|-/CA|frameshift_variant	51.19269402634007	0.19847346126499396	4				NaN	NaN	0	NaN	11724	4106	15828
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15833	40.189	NaN	1469.3	30	0	158.06	0.106				-1	 	0	55	485.7997341418229	969.5849153504458	2	485.79931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11725	4106	15828
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15834	40.191	NaN	1410.9	30	0	170.89	0.106	+			11901	FTVIFFHFD	9	59	586.791041629784	1171.567530326368	2	586.7937622070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FTVIFFHFD_	ENSG00000135749|ENST00000258229|PCNX2;ENST00000475463.6_1_1:233201380-233353905:-|nuORF;ENST00000484041.5_1_1:233225805-233270923:-|nuORF;ENST00000486012.5_1_1:233231420-233297095:-|nuORF;ENST00000520463.1_1_1:233261754-233296164:-|nuORF;nc|ENSG00000135749|A6NKB5-5|PCNX2	30.503639358989545	0.5181749237905803	4				NaN	NaN	0	NaN	11726	4106	15828
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15835	40.193	NaN	1354.8	30	0	338.62	0.038			+	11285	FKEMEMNRV	9	60	608.2807564375771	1214.5469599419541	2	608.784423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Oxidation (M)	_FKEM(Oxidation (M))EM(Oxidation (M))NRV_	REV__ENSG00000145244|ENST00000273857|CORIN;REV__ENST00000502726.5_1_4:47685742-47840047:-|nuORF;REV__ENST00000503821.5_1_4:47663725-47840047:-|nuORF;REV__nc|ENSG00000145244|Q9Y5Q5-2|CORIN	45.97224482568171	0.3502073465782774	4				NaN	NaN	0	NaN	11727	4106	15828
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15841	40.207	NaN	7663.2	30	0	643.43	0.214			+	-1	LYIICMTII	9	66	549.8000227121921	1097.5854924911841	2	549.8013916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LYIICM(Oxidation (M))TII_	REV__tr|U7T8R7|U7T8R7_FUSNUNa+/H+antiporterNhaC-likeC-terminaldomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00145PE=3SV=1	65.80317337860623	0.1652391959156183	4				NaN	NaN	0	NaN	11730	4109	15840
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15842	40.211	NaN	3591.9	30	0	659.15	0.106	+			38571	SSFLGSLFGS	10	69	501.2502219704968	1000.4858910077936	2	501.25079345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSFLGSLFGS_	ENSG00000124313|ENST00000642864|IQSEC2;IQSEC2|p.A1347Lfs*50|1|0.45|ENSG00000124313|chrX:53234647-53234647|C/-|frameshift_variant;IQSEC2|p.Q1376Sfs*21|1|0.15|ENSG00000124313|chrX:53234560-53234560|G/-|frameshift_variant	62.107414245175825	0.3466735403679669	4				NaN	NaN	0	NaN	11731	4109	15840
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15843	40.213	NaN	5425.7	30	0	743.49	0.106	+			43592	TIIDTKGVTAL	11	75	566.3340973929903	1130.6536418527805	2	566.3345336914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TIIDTKGVTAL_	ENSG00000137054|ENST00000377798|POLR1E;ENST00000442009.6_1_9:37489340-37503196:+|nuORF;nc|ENSG00000137054|Q9GZS1-1|POLR1E	85.92353377893507	0.11546253517298165	4				NaN	NaN	0	NaN	11732	4109	15840
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15844	40.215	NaN	2156.2	30	0	305.32	0.106	+			24042	LEGKIEIL	8	59	457.7807128210558	913.5468727089116	2	457.78082275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LEGKIEIL_	nc|ENSG00000144395|Q8NCX0-2|CCDC150	62.107414245175825	0.4809183816468817	4				NaN	NaN	0	NaN	11733	4109	15840
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15845	40.216	NaN	3259.2	30	0	331.93	0.035	+			46027	VAVTPVQAVI	10	68	498.80788624367347	NaN	0	498.80804443359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VAVTPVQAVI_	ENSG00000176248|ENST00000323927|ANAPC2;ENST00000483432.1_1_9:140070142-140074912:-|nuORF;ENST00000493730.1_1_9:140069903-140070286:-|nuORF;nc|ENSG00000176248|Q9UJX6-2|ANAPC2	45.97224482568171	0.33106653400957564	4				NaN	NaN	0	NaN	11734	4109	15840
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15850	40.231	NaN	3176.3	30	0	449.44	0.214	+			5839	AVIGSEFIGI	10	65	503.2829602120234	1004.5513674908468	2	503.2825012207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVIGSEFIGI_	ENSG00000141096|ENST00000268793|DPEP3	53.351449002276354	0.42630798468005626	4				NaN	NaN	0	NaN	11736	4112	15849
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15851	40.234	NaN	2945.6	30	0	392.2	0.106	+			13736	GQAVTLIFK	9	63	488.79415410111994	975.5737552690399	2	488.7948303222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GQAVTLIFK_	ENSG00000144659|ENST00000650617|SLC25A38	54.722347961057174	0.257609425301511	4				NaN	NaN	0	NaN	11737	4112	15849
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15852	40.236	NaN	2802.3	30	0	684.4	0.106			+	16416	HERLGQGLQ	9	66	519.278525127936	1036.5424973226718	2	519.279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HERLGQGLQ_	REV__ENSG00000167772|ENST00000301455|ANGPTL4;REV__ENST00000594348.1_1_19:8429070-8436049:+|nuORF;REV__ENST00000598255.5_1_19:8429205-8436046:+|nuORF;REV__nc|ENSG00000167772|Q9BY76-2|ANGPTL4	34.172542307311794	0.4838870758800184	4				NaN	NaN	0	NaN	11738	4112	15849
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15853	40.238	NaN	2250.8	30	0	307.23	0.106	+			40041	STNAYMPLLK	10	66	569.3015430787067	1136.5885332242133	2	569.3020629882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STNAYMPLLK_	ENSG00000059588|ENST00000040877|TARBP1	78.26377905018397	0.20980573808910843	4				NaN	NaN	0	NaN	11739	4112	15849
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15854	40.24	NaN	3280.8	30	0	589.27	0.106				-1	LYTCTASNLM	10	51	378.1732325332151	NaN	0	378.17327880859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_LYTCTASNLM(Oxidation (M))_	OBSCN|p.V317M|1|0.22|ENSG00000154358|chr1:228212732-228212732|G/A|missense_variant	35.15202426646627	0.38475398474706135	4				NaN	NaN	0	NaN	11740	4112	15849
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15855	40.242	NaN	3295.1	30	0	290.92	0.106	+			947	AEITDKLGL	9	62	480.27436010145453	958.5341672697091	2	480.7786560058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEITDKLGL_	ENSG00000134287|ENST00000256682|ARF3;ENSG00000143761|ENST00000272102|ARF1;ENST00000444561.2_1_17:43710417-43713807:+|nuORF;ENST00000470670.5_1_1:228284963-228285711:+|nuORF;nc|ENSG00000134287|P61204-2|ARF3	75.04331003522576	0.118981335847003	4				NaN	NaN	0	NaN	11741	4112	15849
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15856	40.244	NaN	1930.9	30	0	146.92	0.037			+	-1	QVMKEILEV	9	39	368.8691961322522	1103.5857589969567	3	368.8700866699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_QVM(Oxidation (M))KEILEV_	REV__ENSG00000179144|ENST00000313543|GIMAP7;REV__GIMAP7|p.I261*|1|0.41|ENSG00000179144|chr7:150520750-150520750|A/-|frameshift_variant;REV__GIMAP7|p.N263Kfs*7|1|0.39|ENSG00000179144|chr7:150520756-150520757|-/A|frameshift_variant	31.529811441608018	0.5085848003137583	4				NaN	NaN	0	NaN	11742	4112	15849
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15862	40.26	NaN	7720.5	30	0	1546.1	0.214	+			46543	VFFSGLFEN	9	70	530.2606026802854	1058.5066524273707	2	530.2608642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VFFSGLFEN_	ENSG00000244219|ENST00000431679|TMEM225B	34.172542307311794	0.4838870758800184	4				NaN	NaN	0	NaN	11745	4115	15861
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15863	40.264	NaN	4282.7	30	0	708.69	0.106	+			5926	AVLFTYVGK	9	67	499.2891691606311	996.5637853880622	2	499.2896423339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVLFTYVGK_	ENSG00000117480|ENST00000243167|FAAH;ENST00000468718.5_1_1:46860020-46871294:+|nuORF;ENST00000493735.5_1_1:46860047-46871467:+|nuORF	76.7741389293348	0.11149722112137898	4				NaN	NaN	0	NaN	11746	4115	15861
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15864	40.265	NaN	1293.4	30	0	277.63	0.106			+	-1	CRFGNVLDHCT	11	48	661.2910937244848	NaN	0	661.291015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_C(Carbamidomethyl (C))RFGNVLDHCT_	REV__ENSG00000148204|ENST00000373631|CRB2;REV__nc|ENSG00000148204|Q5IJ48-2|CRB2	18.262085536374414	0.456735970842152	4				NaN	NaN	0	NaN	11747	4115	15861
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15865	40.267	NaN	2150.9	30	0	141.16	0.106			+	-1	CLVSRMLR	8	64	525.7820059700904	1049.5494590069807	2	525.7832641601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_C(Carbamidomethyl (C))LVSRM(Oxidation (M))LR_	REV__ENSG00000125384|ENST00000245457|PTGER2;REV__PTGER2|p.R333W|1|0.22|ENSG00000125384|chr14:52327374-52327374|C/T|missense_variant	33.51558372728122	0.7005509609380386	4				NaN	NaN	0	NaN	11748	4115	15861
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15866	40.269	NaN	1675.9	30	0	207.56	0.034	+			33916	RRTLHPAP	8	54	474.27938485142266	NaN	0	474.2782287597656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RRTLHPAP_	ENSG00000131746|ENST00000254051|TNS4	37.028477286268924	1.7418937515398478	4				NaN	NaN	0	NaN	11749	4115	15861
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15871	40.283	NaN	10775	30	0	853.7	0.214	+			28325	NEFVHINNL	9	86	550.2795714816908	1098.5445900301816	2	550.2805786132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NEFVHINNL_	ENSG00000119414|ENST00000373547|PPP6C;nc|ENSG00000119414|O00743-2|PPP6C;nc|ENSG00000119414|O00743-3|PPP6C	63.53385203322761	0.18415635464017938	4				NaN	NaN	0	NaN	11751	4118	15870
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15872	40.287	NaN	1605.3	30	0	187.59	0.106	+			10352	ETVFFLSF	8	52	495.25493095272157	NaN	0	495.2553405761719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ETVFFLSF_	ENST00000216297.6_1_14:21820582-21820828:-|nuORF	50.0245360154114	1.7418937515398478	4				NaN	NaN	0	NaN	11752	4118	15870
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15873	40.289	NaN	2054.7	30	0	264.42	0.106				-1	LGGEGCSTR	9	57	468.71361603539685	935.4126791375937	2	468.7138977050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LGGEGC(Carbamidomethyl (C))STR_	ENSG00000198691|ENST00000370225|ABCA4	44.116797842482775	0.37197099687881774	4				NaN	NaN	0	NaN	11753	4118	15870
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15874	40.291	NaN	1654	30	0	105.79	0.039			+	29383	PANFHKNEREG	11	60	649.815603385609	1297.616653838018	2	649.815673828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PANFHKNEREG_	REV__tr|U7SS22|U7SS22_FUSNUVirB4familytypeIVsecretion/conjugaltransferATPaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01513PE=3SV=1	27.047317107675042	0.7060868989289394	4				NaN	NaN	0	NaN	11754	4118	15870
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15880	40.305	NaN	3689.5	30	0	327.46	0.214				-1	 	0	68	537.268170749499	1072.5217885657978	2	537.2685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11757	4121	15879
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15881	40.309	NaN	3914	30	0	406.88	0.106			+	11839	FSWRLQLR	8	71	553.3156566811648	1104.6167604291295	2	553.31591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FSWRLQLR_	REV__ENST00000482320.5_1_7:128681673-128694729:-|nuORF	54.776311868738084	0.5534952410049249	4				NaN	NaN	0	NaN	11758	4121	15879
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15882	40.311	NaN	2276	30	0	210.49	0.106				-1	IMTGAYNNF	9	62	523.7341992089798	NaN	0	523.7343139648438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_IM(Oxidation (M))TGAYNNF_	ENSG00000074211|ENST00000382599|PPP2R2C;nc|ENSG00000074211|Q9Y2T4-2|PPP2R2C;nc|ENSG00000074211|Q9Y2T4-3|PPP2R2C;nc|ENSG00000074211|Q9Y2T4-4|PPP2R2C	69.6276240434122	0.10825701912424071	4				NaN	NaN	0	NaN	11759	4121	15879
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15883	40.312	NaN	1749.6	30	0	89.371	0.035			+	38107	SPVPELGLLG	10	61	491.2834677962652	NaN	0	491.28265380859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SPVPELGLLG_	REV__ENSG00000172059|ENST00000305883|KLF11;REV__nc|ENSG00000172059|O14901-2|KLF11	42.396135135203025	0.3536752194735987	4				NaN	NaN	0	NaN	11760	4121	15879
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15888	40.327	NaN	5583.5	30	0	684.76	0.214			+	28488	NGLLKWGVL	9	66	500.3039310282435	998.593309123287	2	500.30401611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NGLLKWGVL_	REV__ENST00000338302.7_1_1:156884783-156884978:+|nuORF	38.80614096846853	0.43426287593479557	4				NaN	NaN	0	NaN	11762	4124	15887
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15889	40.33	NaN	4424.9	30	0	961	0.106	+			12840	GENVIISHF	9	68	508.2639840929136	NaN	0	508.26373291015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GENVIISHF_	ENSG00000177666|ENST00000336615|PNPLA2;ENST00000525250.5_1_11:821680-823850:+|nuORF	81.52500206392136	0.06615817976141032	4				NaN	NaN	0	NaN	11763	4124	15887
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15890	40.332	NaN	5786.7	30	0	935.47	0.106			+	25463	LPQLPGEK	8	54	441.2577849592075	880.5010169852151	2	441.2579040527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LPQLPGEK_	REV__ENSG00000135749|ENST00000258229|PCNX2;REV__ENST00000324142.4_1_1:233337898-233388268:-|nuORF;REV__nc|ENSG00000135749|A6NKB5-2|PCNX2	73.97473282117947	0.3737790450121076	4				NaN	NaN	0	NaN	11764	4124	15887
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15891	40.334	NaN	2737.4	30	0	138.48	0.106	+			50745	YEKILFTEA	9	73	557.2944109343321	1112.574268935464	2	557.2945556640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YEKILFTEA_	ENSG00000099341|ENST00000215071|PSMD8	59.93077597824379	0.21419174904018318	4				NaN	NaN	0	NaN	11765	4124	15887
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15892	40.336	NaN	1141.7	30	0	116.62	0.038	+			51558	YYEKQFPEI	9	63	608.7975777497293	1215.5806025662584	2	608.7975463867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YYEKQFPEI_	ENSG00000141027|ENST00000268712|NCOR1;ENSG00000196498|ENST00000405201|NCOR2;nc|ENSG00000141027|O75376-2|NCOR1;nc|ENSG00000141027|O75376-3|NCOR1;nc|ENSG00000196498|Q9Y618-4|NCOR2;nc|ENSG00000196498|Q9Y618-5|NCOR2;NCOR1|p.P1637Qfs*19|1|0.14|ENSG00000141027|chr17:16065526-16065526|G/-|frameshift_variant;NCOR1|p.R572Efs*18|1|0.07|ENSG00000141027|chr17:16121191-16121191|C/-|frameshift_variant;NCOR2|p.E841Rfs*123|1|0.06|ENSG00000196498|chr12:124372308-124372308|C/-|frameshift_variant;NCOR2|p.H1302Mfs*12|2|0.25|ENSG00000196498|chr12:124348255-124348255|G/-|frameshift_variant;NCOR2|p.I976Sfs*87|5|0.39|ENSG00000196498|chr12:124363682-124363682|G/-|frameshift_variant;NCOR2|p.L1405*|1|0.44|ENSG00000196498|chr12:124346710-124346710|G/-|frameshift_variant;NCOR2|p.P1047Lfs*16|1|0.43|ENSG00000196498|chr12:124356743-124356743|G/-|frameshift_variant;NCOR2|p.R1060Vfs*3|1|0.23|ENSG00000196498|chr12:124356705-124356705|G/-|frameshift_variant;NCOR2|p.R986Gfs*77|1|0.18|ENSG00000196498|chr12:124362270-124362270|G/-|frameshift_variant	45.02220120713402	0.3613509778819777	4				NaN	NaN	0	NaN	11766	4124	15887
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15897	40.35	NaN	10692	30	0	1013.1	0.214	+			20370	KESSTVFEL	9	79	520.2684172517637	1038.5222815703273	2	520.2691040039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KESSTVFEL_	ENSG00000103363|ENST00000409906|ELOB;nc|ENSG00000103363|Q15370-2|ELOB	80.45461616416974	0.09558281504443908	4				NaN	NaN	0	NaN	11768	4127	15896
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15898	40.353	NaN	2828.2	30	0	694.11	0.106				-1	 	0	43	336.5337320249258	1006.5793666749776	3	336.8685302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11769	4127	15896
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15899	40.355	NaN	2466.6	30	0	307.08	0.106			+	29066	NTILEVVSYD	10	67	576.7921721804975	1151.5697914277948	2	576.79345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NTILEVVSYD_	REV__tr|U7T1U1|U7T1U1_FUSNUCellshape-determiningproteinMreCOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00580PE=3SV=1	40.77816245573522	0.5419747034533848	4				NaN	NaN	0	NaN	11770	4127	15896
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15900	40.357	NaN	1709.7	30	0	305.66	0.039			+	-1	CIGRDVDWLR	10	61	645.3254980289126	1288.6364431246252	2	645.8275756835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_C(Carbamidomethyl (C))IGRDVDWLR_	REV__ENSG00000177565|ENST00000457928|TBL1XR1	23.52269567125451	0.6877354443478558	4				NaN	NaN	0	NaN	11771	4127	15896
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15907	40.374	NaN	8447.5	30	0	859.85	0.214	+			36214	SELRFTQL	8	77	497.2714952240613	992.5284375149226	2	497.2718811035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SELRFTQL_	ENSG00000137857|ENST00000389037|DUOX1;ENSG00000140279|ENST00000389039|DUOX2;ENST00000557893.5_1_15:45440187-45444854:+|nuORF;ENST00000558383.1_1_15:45393877-45400429:-|nuORF;ENST00000561220.6_1_15:45434150-45457096:+|nuORF;nc|ENSG00000137857|Q9NRD9-2|DUOX1;nc|ENSG00000140279|Q9NRD8|DUOX2	112.41091882917199	0.2438316832735406	4				NaN	NaN	0	NaN	11775	4130	15906
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15908	40.377	NaN	5030.6	30	0	1126.1	0.106	+			18170	ILSNSLAIAI	10	68	507.8127621962346	1013.6109714592692	2	507.81365966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ILSNSLAIAI_	ENSG00000122420|ENST00000370757|PTGFR;nc|ENSG00000122420|P43088-2|PTGFR;nc|ENSG00000122420|P43088-3|PTGFR;nc|ENSG00000122420|P43088-4|PTGFR;nc|ENSG00000122420|P43088-5|PTGFR;nc|ENSG00000122420|P43088-6|PTGFR;nc|ENSG00000122420|P43088-7|PTGFR;PTGFR|p.V137Lfs*18|1|0.04|ENSG00000122420|chr1:78493151-78493152|-/CTTCT|frameshift_variant	51.33545320467046	0.4446945571623749	4				NaN	NaN	0	NaN	11776	4130	15906
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15909	40.379	NaN	2234.1	30	0	255.35	0.106			+	42617	TAVCFAFAKLG	11	61	564.3014418627782	1126.5883307923564	2	564.3013305664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TAVCFAFAKLG_	REV__ENSG00000170876|ENST00000306077|TMEM43	36.446750945000026	0.6065623449959539	4				NaN	NaN	0	NaN	11777	4130	15906
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15910	40.381	NaN	2955.5	30	0	498.52	0.106			+	25630	LQQLSPLAI	9	53	491.79982760624745	981.5851022792949	2	491.8003234863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LQQLSPLAI_	REV__TET3|p.Q379Rfs*162|2|0.23|ENSG00000187605|chr2:74047047-74047047|C/-|frameshift_variant	58.78195531508484	0.22376836668196862	4				NaN	NaN	0	NaN	11778	4130	15906
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15911	40.383	NaN	2054.1	30	0	132.94	0.106	+			22238	KSYRPLCTL	9	62	540.7952655317195	1079.5759781302388	2	540.7963256835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KSYRPLCTL_	ENSG00000179104|ENST00000321196|TMTC2;ENST00000551915.5_1_12:83081308-83379891:+|nuORF;TMTC2|p.A737Qfs*4|1|0.25|ENSG00000179104|chr12:83050953-83050953|A/-|frameshift_variant;TMTC2|p.L239Wfs*90|1|0.34|ENSG00000179104|chr12:82895876-82895876|T/-|frameshift_variant;TMTC2|p.Y457Mfs*6|1|0.29|ENSG00000179104|chr12:82896527-82896527|T/-|frameshift_variant	47.95952297671804	0.32689736945648856	4				NaN	NaN	0	NaN	11779	4130	15906
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15912	40.384	NaN	2526.4	30	0	358.56	0.106			+	25647	LQTLEQLQ	8	61	486.7714872917995	971.528421650399	2	486.771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LQTLEQLQ_	REV__ENSG00000181284|ENST00000323206|TMEM102;REV__TMEM102|p.S127Hfs*37|1|0.22|ENSG00000181284|chr17:7436355-7436355|T/-|frameshift_variant	74.25504064058377	0.37144338840759816	4				NaN	NaN	0	NaN	11780	4130	15906
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15913	40.386	NaN	2095.6	30	0	241.71	0.036			+	26831	LVTHGYVVY	9	62	525.7852069074185	1049.5558608816368	2	526.2845458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LVTHGYVVY_	REV__ENSG00000157119|ENST00000287777|KLHL40	33.51558372728122	0.4900267029546261	4				NaN	NaN	0	NaN	11781	4130	15906
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15920	40.403	NaN	21527	30	0	3241.2	0.214				-1	 	0	82	496.79175118907887	991.5689494449578	2	496.79254150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11785	4133	15919
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15921	40.406	NaN	13300	30	0	3520.1	0.106			+	8525	EAVAQYRLL	9	79	531.7996280277334	1061.5847031222668	2	531.80126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EAVAQYRLL_	REV__ENSG00000170122|ENST00000382500|FOXD4	74.25504064058377	0.12238981753128622	4				NaN	NaN	0	NaN	11786	4133	15919
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15922	40.408	NaN	7927.3	30	0	1662.4	0.106	+			45021	TVFLSTWNK	9	80	548.2946359481979	1094.5747189631957	2	548.2958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVFLSTWNK_	ENSG00000173821|ENST00000582970|RNF213;ENST00000411702.7_1_17:78356744-78367295:+|nuORF;ENST00000427003.7_1_17:78356226-78367295:+|nuORF;nc|ENSG00000173821|Q63HN8-4|RNF213;nc|ENSG00000173821|Q63HN8-6|RNF213;nc|ENSG00000173821|Q63HN8|RNF213;RNF213|p.C5022Lfs*7|1|0.3|ENSG00000173821|chr17:80389237-80389237|G/-|frameshift_variant	95.81516180277367	0.04847050768394289	4				NaN	NaN	0	NaN	11787	4133	15919
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15923	40.41	NaN	5494.8	30	0	781.57	0.106	+			35915	SEFPIRTL	8	66	481.76890145154107	961.5232499698822	2	481.7690124511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SEFPIRTL_	CKAP5|p.V1971Lfs*42|1|0.03|ENSG00000175216|chr11:46744211-46744212|-/TTGAAAAAAAG|frameshift_variant;ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5	79.71258880314673	0.32596852995588826	4				NaN	NaN	0	NaN	11788	4133	15919
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15924	40.412	NaN	2479.3	30	0	597.27	0.106				-1	 	0	48	433.75210568107997	865.48965842896	2	433.752685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11789	4133	15919
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15925	40.414	NaN	3223.1	30	0	603.67	0.106	+			27160	MCREVHVY	8	70	526.7372104920404	1051.4598680508807	2	526.7381591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_M(Oxidation (M))CREVHVY_	ENSG00000144057|ENST00000409382|ST6GAL2	60.29395666154354	0.49887135096048313	4				NaN	NaN	0	NaN	11790	4133	15919
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15926	40.415	NaN	2717.5	30	0	174.56	0.044	+			12023	FWYLRWRQHRG	11	68	535.6159303457683	1603.8259616375049	3	535.9517211914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FWYLRWRQHRG_	ENSG00000126460|ENST00000246794|PRRG2;ENST00000597121.5_1_19:50086773-50093643:+|nuORF	1.5229847967890655	0.8889384911710808	4				NaN	NaN	0	NaN	11791	4133	15919
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15931	40.43	NaN	6574	30	0	957.87	0.214				-1	 	0	59	446.23172807042823	890.4489032076565	2	446.23187255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11793	4136	15930
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15932	40.433	NaN	1165.8	30	0	90.009	0.106				-1	 	0	50	347.1982704583101	692.3819879834202	2	347.19854736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11794	4136	15930
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15933	40.435	NaN	1508.7	30	0	142.34	0.106	+			47066	VLHCLGIW	8	56	470.7584337155465	NaN	0	470.7584228515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VLHCLGIW_	SLC9A9|p.V406Cfs*92|1|0.4|ENSG00000181804|chr3:143493752-143493753|-/A|frameshift_variant	54.89457262308372	1.7418937515398478	4				NaN	NaN	0	NaN	11795	4136	15930
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15934	40.437	NaN	2029.5	30	0	127.52	0.034			+	48307	VTEHFIIV	8	58	479.2755692734867	NaN	0	479.2758483886719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTEHFIIV_	REV__ENSG00000165861|ENST00000556143|ZFYVE1;REV__nc|ENSG00000165861|Q9HBF4-3|ZFYVE1	44.53106598305862	1.7418937515398478	4				NaN	NaN	0	NaN	11796	4136	15930
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15940	40.451	NaN	28510	30	0	5758.2	0.214	+			7307	DASKVVTVF	9	81	483.2681730533023	964.5217931734046	2	483.2685852050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DASKVVTVF_	ENSG00000071127|ENST00000499869|WDR1;ENST00000502962.5_1_4:10077004-10094774:-|nuORF;ENST00000515743.5_1_4:10078742-10093271:-|nuORF;nc|ENSG00000071127|O75083-3|WDR1	112.2953585152457	0.026655838328212944	4				NaN	NaN	0	NaN	11799	4139	15939
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15941	40.455	NaN	10910	30	0	753.74	0.106	+			28041	NAAKVFNLY	9	86	520.2827746796277	1038.5509964260552	2	520.2835693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NAAKVFNLY_	ENSG00000092964|ENST00000521913|DPYSL2;nc|ENSG00000092964|Q16555-2|DPYSL2;nc|ENSG00000092964|Q16555|DPYSL2	82.7504851949679	0.08565546331141553	4				NaN	NaN	0	NaN	11800	4139	15939
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15942	40.457	NaN	6938	30	0	578.39	0.106	+			27223	MEKIPVSAF	9	74	511.27282853074996	1020.5311041283	2	511.2745361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MEKIPVSAF_	ENSG00000106541|ENST00000419304|AGR2	73.84112541714126	0.12417958948937492	4				NaN	NaN	0	NaN	11801	4139	15939
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15943	40.459	NaN	4490.2	30	0	858.2	0.106			+	27188	MDTLHMAL	8	59	466.22199714891786	930.4294413646357	2	466.2223815917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MDTLHMAL_	REV__ENSG00000198399|ENST00000355123|ITSN2;REV__ITSN2|p.A1240Pfs*15|1|0.05|ENSG00000198399|chr2:24217995-24217996|-/AAGGG|frameshift_variant;REV__ITSN2|p.A1583Pfs*86|1|0.25|ENSG00000198399|chr2:24205230-24205230|T/-|frameshift_variant;REV__ITSN2|p.F1478Qfs*12|1|0.3|ENSG00000198399|chr2:24209858-24209859|AA/-|frameshift_variant;REV__ITSN2|p.T790Nfs*11|1|0.43|ENSG00000198399|chr2:24261729-24261730|-/T|frameshift_variant;REV__nc|ENSG00000198399|Q9NZM3-2|ITSN2;REV__nc|ENSG00000198399|Q9NZM3-3|ITSN2;REV__nc|ENSG00000198399|Q9NZM3-4|ITSN2	57.81127852772723	0.5234495074909924	4				NaN	NaN	0	NaN	11802	4139	15939
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15944	40.46	NaN	2749.6	30	0	590.4	0.106			+	42578	TASSFLLLR	9	60	504.2963244418399	1006.5780959504798	2	504.29638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TASSFLLLR_	REV__ENSG00000183751|ENST00000568546|TBL3	54.776311868738084	0.25715957988447635	4				NaN	NaN	0	NaN	11803	4139	15939
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15945	40.462	NaN	1293.2	30	0	205.83	0.106			+	20253	KEMKQLAETTS	11	54	633.3245849609375	NaN	0	633.3245849609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KEMKQLAETTS_	REV__ENST00000578618.5_1_18:5398595-5399237:-|nuORF	26.063383197487333	0.44926255568796863	4				NaN	NaN	0	NaN	11804	4139	15939
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15946	40.464	NaN	1754.2	30	0	221.93	0.034			+	27747	MQPASVGLN	9	57	458.73080143381213	NaN	0	458.73077392578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MQPASVGLN_	REV__ENSG00000180263|ENST00000343958|FGD6;REV__FGD6|p.K498Nfs*39|1|0.4|ENSG00000180263|chr12:95209790-95209790|T/-|frameshift_variant;REV__FGD6|p.S531Vfs*6|1|0.33|ENSG00000180263|chr12:95209693-95209693|T/-|frameshift_variant;REV__nc|ENSG00000180263|Q6ZV73-2|FGD6	62.107414245175825	0.1403307765918332	4				NaN	NaN	0	NaN	11805	4139	15939
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15950	40.477	NaN	5403.6	30	0	795.28	0.214	+			18004	IIEPSLRQL	9	78	534.8237079188793	1067.6328629045586	2	534.8245239257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IIEPSLRQL_	ENSG00000221983|ENST00000442744|UBA52	110.11987700582712	0.028875675806141952	4				NaN	NaN	0	NaN	11806	4142	15949
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15951	40.481	NaN	3643	30	0	553.27	0.106			+	37612	SLPTGVQVF	9	64	474.2629666564699	946.5113803797399	2	474.26324462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLPTGVQVF_	REV__ENSG00000253309|ENST00000681248|SERPINE3;REV__nc|ENSG00000253309|A8MV23|SERPINE3;REV__SERPINE3|p.L270*|2|0.3|ENSG00000253309|chr13:51348315-51348315|C/-|frameshift_variant	63.30626980617807	0.18605348971131092	4				NaN	NaN	0	NaN	11807	4142	15949
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15952	40.483	NaN	4553.1	30	0	454.17	0.106			+	17547	IDTDLRNPK	9	74	536.292601165393	1070.5706493975858	2	536.29345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IDTDLRNPK_	REV__ENSG00000205978|ENST00000382554|NYNRIN;REV__NYNRIN|p.A1060Qfs*55|1|0.28|ENSG00000205978|chr14:24414924-24414924|G/-|frameshift_variant;REV__NYNRIN|p.A1288Rfs*152|1|0.45|ENSG00000205978|chr14:24415606-24415606|C/-|frameshift_variant;REV__NYNRIN|p.G1206Vfs*50|1|0.1|ENSG00000205978|chr14:24415362-24415362|G/-|frameshift_variant	64.20726635412375	0.17854274437659667	4				NaN	NaN	0	NaN	11808	4142	15949
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15953	40.485	NaN	1917.7	30	0	140.22	0.106	+			17587	IEEERQDLT	9	79	566.777388406429	1131.540223879658	2	566.7781372070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IEEERQDLT_	ENSG00000116584|ENST00000361247|ARHGEF2;ENST00000474428.6_1_1:155922555-155932010:-|nuORF;nc|ENSG00000116584|Q92974-2|ARHGEF2;nc|ENSG00000116584|Q92974-3|ARHGEF2	51.33545320467046	0.2872990594074956	4				NaN	NaN	0	NaN	11809	4142	15949
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15954	40.486	NaN	1710.2	30	0	105	0.106			+	7547	DHELDASKQK	10	72	585.7926201000139	1169.5706872668277	2	586.29443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DHELDASKQK_	REV__CLASP1|p.G210Dfs*7|1|0.15|ENSG00000074054|chr2:121515682-121515682|T/-|frameshift_variant;REV__ENSG00000074054|ENST00000696935|CLASP1;REV__nc|ENSG00000074054|Q7Z460-2|CLASP1;REV__nc|ENSG00000074054|Q7Z460-3|CLASP1;REV__nc|ENSG00000074054|Q7Z460-4|CLASP1;REV__nc|ENSG00000074054|Q7Z460-5|CLASP1;REV__nc|ENSG00000074054|Q7Z460|CLASP1	35.15202426646627	0.5927656479315102	4				NaN	NaN	0	NaN	11810	4142	15949
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15955	40.488	NaN	1099	30	0	123.63	0.106				-1	 	0	60	454.2468332634687	453.2395567968687	1	454.24749755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11811	4142	15949
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15956	40.49	NaN	2890.1	30	0	306.75	0.036			+	2085	ALELKQCSPI	10	73	551.3014526367188	NaN	0	551.3014526367188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ALELKQCSPI_	REV__ENST00000393299.6_1_6:71138108-71233862:+|nuORF;REV__nc|ENSG00000082269|Q9P2D6-3|FAM135A	45.97224482568171	0.33106653400957564	4				NaN	NaN	0	NaN	11812	4142	15949
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15963	40.506	NaN	15434	30	0	3455	0.214			+	7762	DNVHHSQLI	9	79	531.7709578273061	1061.5273627214121	2	531.7713623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DNVHHSQLI_	REV__ENSG00000177084|ENST00000320574|POLE;REV__ENST00000537064.5_1_12:133201285-133234573:-|nuORF;REV__ENST00000542362.1_1_12:133218156-133218763:-|nuORF;REV__POLE|p.A2030Pfs*18|1|0.14|ENSG00000177084|chr12:132632712-132632712|C/-|frameshift_variant	69.6276240434122	0.14239879520340665	4				NaN	NaN	0	NaN	11816	4145	15962
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15964	40.509	NaN	3089.4	30	0	191.97	0.106	+			49991	WAMKMILA	8	65	490.25748393855974	978.5004149439195	2	490.25689697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_WAMKM(Oxidation (M))ILA_	ENST00000521663.1_1_8:58192902-58193274:+|nuORF	44.53106598305862	0.628196326904373	4				NaN	NaN	0	NaN	11817	4145	15962
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15965	40.511	NaN	2687.6	30	0	670.38	0.106	+			49350	VVSQAISP	8	49	400.7288490411749	799.4431451491498	2	400.7288513183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVSQAISP_	ENST00000264954.4_1_4:7065872-7069814:-|nuORF	44.116797842482775	0.6307669463330267	4				NaN	NaN	0	NaN	11818	4145	15962
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15966	40.513	NaN	3232.1	30	0	239.57	0.038	+			9811	EPFTGSSKILY	11	76	621.3234088733037	1240.6322648134073	2	621.32421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EPFTGSSKILY_	CDH17|p.S645Lfs*3|1|0.55|ENSG00000079112|chr8:94146163-94146163|C/-|frameshift_variant;ENSG00000079112|ENST00000027335|CDH17	84.31045756130733	0.12206600909821903	4				NaN	NaN	0	NaN	11819	4145	15962
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15973	40.53	NaN	7151.2	30	0	1544.4	0.214	+			51444	YVDWHFLL	8	68	546.7797862106262	1091.5450194880523	2	546.78076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YVDWHFLL_	AOC3|p.R585Sfs*60|1|0.28|ENSG00000131471|chr17:42854594-42854595|-/C|frameshift_variant;AOC3|p.T657Lfs*22|1|0.15|ENSG00000131471|chr17:42855521-42855521|C/-|frameshift_variant;ENSG00000131471|ENST00000308423|AOC3;nc|ENSG00000131471|Q16853-2|AOC3	55.50420428727701	0.5462892107279674	4				NaN	NaN	0	NaN	11823	4148	15972
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15974	40.534	NaN	1663.6	30	0	301.23	0.106				-1	CGSSCCSCCW	10	43	384.7720842070557	NaN	0	384.7723388671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))GSSC(Carbamidomethyl (C))CSCCW_	ENST00000228741.7_1_12:96588285-96617411:+|nuORF	1.8869224993972666	0.4201028297492154	4				NaN	NaN	0	NaN	11824	4148	15972
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15975	40.536	NaN	1830.4	30	0	333.86	0.034	+			35056	SAETLGPGAL	10	55	458.2424852662051	NaN	0	458.2427062988281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAETLGPGAL_	ARHGAP23|p.A364T|1|0.33|ENSG00000275832|chr17:38466773-38466773|G/A|missense_variant	40.77816245573522	0.36390427802201647	4				NaN	NaN	0	NaN	11825	4148	15972
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15981	40.55	NaN	3892	30	0	565.56	0.214			+	24574	LGNQAVYAP	9	62	466.7448205659697	931.4750881987394	2	466.7451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LGNQAVYAP_	REV__ENSG00000132915|ENST00000255266|PDE6A;REV__PDE6A|p.A811Gfs*10|1|0.37|ENSG00000132915|chr5:149863193-149863193|G/-|frameshift_variant;REV__PDE6A|p.R582Afs*19|1|0.45|ENSG00000132915|chr5:149886360-149886361|-/T|frameshift_variant	47.91560031466742	0.327412564698279	4				NaN	NaN	0	NaN	11828	4151	15980
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15982	40.554	NaN	2165.5	30	0	134.34	0.106	+			41221	SVLEQSFLR	9	62	539.7984839165401	NaN	0	539.7989501953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVLEQSFLR_	ENSG00000085840|ENST00000371568|ORC1;ORC1|p.N769K|1|0.24|ENSG00000085840|chr1:52374894-52374894|A/C|missense_variant	75.04331003522576	0.0883683072398826	4				NaN	NaN	0	NaN	11829	4151	15980
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15983	40.556	NaN	1333.4	30	0	282.76	0.106	+			35057	SAETVAIQP	9	54	458.2424852662051	NaN	0	458.24224853515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAETVAIQP_	ENSG00000197302|ENST00000316491|KRBOX5;ENST00000529943.6_1_16:31724760-31765604:+|nuORF;ENST00000534277.5_1_16:31724760-31767037:+|nuORF	29.14955571784316	0.3303970763161698	4				NaN	NaN	0	NaN	11830	4151	15980
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15984	40.558	NaN	886.99	30	0	82.804	0.106				-1	 	0	36	395.02669285763176	NaN	0	395.02685546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11831	4151	15980
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15985	40.559	NaN	1854.8	30	0	272.51	0.106	+			35716	SDLKVIVM	8	55	452.76178012650206	903.5090073198041	2	453.263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SDLKVIVM_	ENSG00000109606|ENST00000336812|DHX15	40.77816245573522	0.6514838689002179	4				NaN	NaN	0	NaN	11832	4151	15980
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15986	40.561	NaN	1511.9	30	0	106.71	0.037				-1	MLGVAYEAPSL	11	60	583.7924194335938	NaN	0	583.7924194335938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_M(Oxidation (M))LGVAYEAPSL_	ENSG00000159377|ENST00000290541|PSMB4;ENST00000474100.1_1_1:151372658-151373852:+|nuORF	34.172542307311794	0.4131234684587831	4				NaN	NaN	0	NaN	11833	4151	15980
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15990	40.575	NaN	2845.2	30	0	258.54	0.214			+	9699	EMESYLKL	8	59	506.7561681054002	1011.4977832776004	2	506.7546081542969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EMESYLKL_	REV__ENSG00000171241|ENST00000303383|SHCBP1;REV__ENST00000566016.5_1_16:46637844-46655271:-|nuORF	45.97224482568171	0.6192535143389125	4				NaN	NaN	0	NaN	11834	4154	15989
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15991	40.578	NaN	2781.6	30	0	384.34	0.106			+	2212	ALQHALIYI	9	72	521.3075921589767	1040.6006313847533	2	521.3082885742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ALQHALIYI_	REV__ENSG00000123104|ENST00000381340|ITPR2;REV__ENSG00000150995|ENST00000649015|ITPR1;REV__nc|ENSG00000150995|Q14643-2|ITPR1;REV__nc|ENSG00000150995|Q14643-3|ITPR1;REV__nc|ENSG00000150995|Q14643-4|ITPR1;REV__nc|ENSG00000150995|Q14643-5|ITPR1;REV__nc|ENSG00000150995|Q14643-6|ITPR1;REV__nc|ENSG00000150995|Q14643-7|ITPR1;REV__nc|ENSG00000150995|Q14643-8|ITPR1	31.954861631926434	0.5046124803899898	4				NaN	NaN	0	NaN	11835	4154	15989
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15992	40.58	NaN	2202.7	30	0	184.2	0.106			+	1490	AFPQRGGRL	9	68	501.28542897718677	1000.5563050211736	2	501.2859191894531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AFPQRGGRL_	REV__ENSG00000225614|ENST00000565624|ZNF469;REV__ZNF469|p.A3754Rfs*17|1|0.31|ENSG00000225614|chr16:88438809-88438810|-/C|frameshift_variant;REV__ZNF469|p.R3634Efs*58|4|0.52|ENSG00000225614|chr16:88438444-88438444|G/-|frameshift_variant;REV__ZNF469|p.R3818Gfs*95|1|0.46|ENSG00000225614|chr16:88439000-88439000|C/-|frameshift_variant	37.15910966729921	0.4535818937225704	4				NaN	NaN	0	NaN	11836	4154	15989
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15993	40.582	NaN	1452	30	0	138.12	0.106	+			27168	MDFTAARL	8	57	462.73335247327196	923.452152013344	2	462.7339172363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MDFTAARL_	ENSG00000102580|ENST00000602402|DNAJC3	79.71258880314673	0.32596852995588826	4				NaN	NaN	0	NaN	11837	4154	15989
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15994	40.584	NaN	2309.3	30	0	322.08	0.106				-1	CRRRRARRRRK	11	69	543.0030124961753	NaN	0	543.28564453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_C(Carbamidomethyl (C))RRRRARRRRK_	ENST00000585362.6_3_19:1104424-1105401:+|nuORF	9.64613948735714	0.456735970842152	4				NaN	NaN	0	NaN	11838	4154	15989
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15995	40.586	NaN	1901.1	30	0	244.32	0.106			+	7086	CVQNQVPPGW	10	62	564.2708342721397	1126.5271156110794	2	564.2714233398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_CVQNQVPPGW_	REV__ENST00000480011.5_1_7:156447331-156451185:+|nuORF	35.15202426646627	0.5927656479315102	4				NaN	NaN	0	NaN	11839	4154	15989
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15996	40.588	NaN	592.04	30	0	133.33	0.03			+	46680	VGGVAGLA	8	30	322.1935529238788	NaN	0	322.19342041015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VGGVAGLA_	REV__ENSG00000241935|ENST00000370646|HOGA1;REV__HOGA1|p.F283Lfs*31|1|0.08|ENSG00000241935|chr10:97611520-97611521|-/A|frameshift_variant	24.504012794735996	1.7418937515398478	4				NaN	NaN	0	NaN	11840	4154	15989
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16001	40.602	NaN	3523.4	30	0	256.47	0.214	+			37279	SLAIIMQEV	9	71	502.2777000995189	1002.5408472658378	2	502.2781982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLAIIMQEV_	ENSG00000132518|ENST00000254854|GUCY2D	44.377184641726394	0.36891676396732553	4				NaN	NaN	0	NaN	11842	4157	16000
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16002	40.605	NaN	3016.6	30	0	272.86	0.106			+	7000	CRKIMMWLA	9	72	576.2963145358495	1150.578076138499	2	576.298095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_CRKIMMWLA_	REV__ENSG00000127249|ENST00000342695|ATP13A4;REV__nc|ENSG00000127249|Q4VNC1-4|ATP13A4	97.47269410471826	0.04379738608259218	4				NaN	NaN	0	NaN	11843	4157	16000
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16003	40.607	NaN	2707.9	30	0	756.17	0.106			+	9820	EPGPPPRVPV	10	64	522.7947916675142	1043.5750304018284	2	522.795166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EPGPPPRVPV_	REV__ENSG00000080603|ENST00000262518|SRCAP;REV__nc|ENSG00000080603|Q6ZRS2-2|SRCAP;REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP;REV__SRCAP|p.K2179Rfs*128|1|0.2|ENSG00000080603|chr16:30733930-30733930|A/-|frameshift_variant;REV__SRCAP|p.L2975*|1|0.31|ENSG00000080603|chr16:30738960-30738960|C/-|frameshift_variant;REV__SRCAP|p.P1878Hfs*89|2|0.36|ENSG00000080603|chr16:30725050-30725050|C/-|frameshift_variant;REV__SRCAP|p.P1879Tfs*21|1|0.46|ENSG00000080603|chr16:30725049-30725050|-/C|frameshift_variant;REV__SRCAP|p.R1871Gfs*96|1|0.19|ENSG00000080603|chr16:30725031-30725031|C/-|frameshift_variant;REV__SRCAP|p.R2548Efs*3|1|0.36|ENSG00000080603|chr16:30737668-30737669|-/C|frameshift_variant;REV__SRCAP|p.S1859Afs*108|1|0.25|ENSG00000080603|chr16:30724993-30724993|C/-|frameshift_variant	37.81151784470057	0.569310847604193	4				NaN	NaN	0	NaN	11844	4157	16000
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16004	40.609	NaN	2529.7	30	0	242.12	0.106			+	-1	MGPPPPGMVP	10	58	506.2348583080893	1010.4551636829787	2	506.235595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Oxidation (M)	_M(Oxidation (M))GPPPPGM(Oxidation (M))VP_	REV__ENST00000505417.1_1_4:9585568-9585742:-|nuORF	44.53106598305862	0.5073935772121767	4				NaN	NaN	0	NaN	11845	4157	16000
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16005	40.611	NaN	1870.2	30	0	167.05	0.106			+	23891	LDIVRIEL	8	60	485.7999409912101	NaN	0	485.79974365234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LDIVRIEL_	REV__ENSG00000134760|ENST00000257192|DSG1	35.61828744233558	1.7418937515398478	4				NaN	NaN	0	NaN	11846	4157	16000
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16006	40.613	NaN	2150.3	30	0	387.9	0.032			+	43835	TLSTPLGK	8	40	408.74543947726846	815.476326021337	2	408.7456970214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TLSTPLGK_	REV__ENST00000226004.7_1_17:41847131-41852211:-|nuORF	18.324413293986947	0.7971860551947066	4				NaN	NaN	0	NaN	11847	4157	16000
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16013	40.629	NaN	7560.4	30	0	703.98	0.214			+	9401	EKFWQVIT	8	72	525.7852069074185	1049.5558608816368	2	525.7864990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EKFWQVIT_	REV__LCT|p.R1514W|1|0.24|ENSG00000115850|chr2:135804053-135804053|G/A|missense_variant	60.97194046774394	0.49215940876911696	4				NaN	NaN	0	NaN	11851	4160	16012
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16014	40.632	NaN	3680.3	30	0	413.29	0.106			+	23622	LAPSRGSMTTY	11	75	600.2895397580315	1198.564526582863	2	600.2903442382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LAPSRGSM(Oxidation (M))TTY_	REV__ENSG00000183317|ENST00000373048|EPHA10;REV__ENST00000446149.6_1_1:38181546-38201012:-|nuORF;REV__EPHA10|p.R869Gfs*10|1|0.12|ENSG00000183317|chr1:37719566-37719566|G/-|frameshift_variant;REV__nc|ENSG00000183317|Q5JZY3-3|EPHA10	51.52775601994872	0.4002081502334604	4				NaN	NaN	0	NaN	11852	4160	16012
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16015	40.634	NaN	3431.6	30	0	326.85	0.106			+	27864	MTHLGITAES	10	67	530.2606026802854	1058.5066524273707	2	530.2635498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MTHLGITAES_	REV__ENSG00000253710|ENST00000521508|ALG11	32.81241826257853	0.6118718159329168	4				NaN	NaN	0	NaN	11853	4160	16012
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16016	40.636	NaN	2226.9	30	0	104.71	0.106			+	25163	LLVIEARY	8	59	488.79401371765164	975.5734745021033	2	488.7946472167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LLVIEARY_	REV__CD83|p.L185Sfs*10|1|0.36|ENSG00000112149|chr6:14135167-14135167|T/-|frameshift_variant;REV__ENSG00000112149|ENST00000379153|CD83	44.53106598305862	0.628196326904373	4				NaN	NaN	0	NaN	11854	4160	16012
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16017	40.638	NaN	3975.1	30	0	543.92	0.106	+			2727	AQVWGSPL	8	57	429.228925223348	856.4432975134961	2	429.2291259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AQVWGSPL_	ENST00000571541.5_1_17:7297219-7297795:-|nuORF;ENST00000573774.5_1_17:7297219-7297836:-|nuORF	57.81127852772723	0.5234495074909924	4				NaN	NaN	0	NaN	11855	4160	16012
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16018	40.639	NaN	3179	30	0	237.28	0.106			+	-1	KKRGEMGSM	9	73	528.2519280835173	1054.4893032338346	2	528.7552490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Oxidation (M)	_KKRGEM(Oxidation (M))GSM(Oxidation (M))_	REV__ENSG00000159173|ENST00000361379|TNNI1	37.15910966729921	0.4535818937225704	4				NaN	NaN	0	NaN	11856	4160	16012
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16019	40.641	NaN	1528.2	30	0	96.457	0.038				-1	VRGAEPRSCPI	11	60	621.3234088733037	1240.6322648134073	2	621.8268432617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_VRGAEPRSC(Carbamidomethyl (C))PI_	ENST00000525294.5_1_6:44102412-44108244:+|nuORF	24.231819034082204	0.7356191775841856	4				NaN	NaN	0	NaN	11857	4160	16012
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16023	40.655	NaN	3926.4	30	0	561.57	0.215			+	23741	LCALAMVRL	9	59	495.28427793757186	988.5540029419437	2	495.2841491699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LCALAMVRL_	REV__ENST00000316292.13_1_6:74230568-74230718:-|nuORF	73.97473282117947	0.12360187025703594	4				NaN	NaN	0	NaN	11858	4163	16022
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16024	40.658	NaN	2096.8	30	0	210.32	0.106	+			27923	MVALVLPNY	9	64	510.2825023196274	1018.5504517060548	2	510.28118896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MVALVLPNY_	ENSG00000179094|ENST00000317276|PER1;PER1|p.A962Pfs*160|1|0.38|ENSG00000179094|chr17:8143454-8143454|C/-|frameshift_variant	50.0245360154114	0.3026755932229825	4				NaN	NaN	0	NaN	11859	4163	16022
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16025	40.66	NaN	1750.3	30	0	122.62	0.106			+	13525	GLQTEIDVR	9	64	515.7798670213573	NaN	0	515.779541015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GLQTEIDVR_	REV__ENSG00000141622|ENST00000269439|RNF165;REV__nc|ENSG00000141622|Q6ZSG1-2|ARK2C	36.446750945000026	0.29355505452396785	4				NaN	NaN	0	NaN	11860	4163	16022
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16026	40.662	NaN	2241.3	30	0	367.44	0.106			+	11988	FVQVTPNQ	8	59	466.7448205659697	931.4750881987394	2	466.7452697753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FVQVTPNQ_	REV__tr|U7SYZ5|U7SYZ5_FUSNUEthanolamineammonia-lyasesmallsubunitOS=FusobacteriumnucleatumCTI-5OX=1316586GN=eutCPE=3SV=1	30.503639358989545	0.7238069182250283	4				NaN	NaN	0	NaN	11861	4163	16022
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16027	40.664	NaN	2807.2	30	0	167.11	0.106	+			27903	MTSLTERSF	9	67	536.2606369526477	NaN	0	536.2603149414062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MTSLTERSF_	ENST00000556709.1_1_14:65494301-65494447:+|nuORF	38.753607047826485	0.28190821760017076	4				NaN	NaN	0	NaN	11862	4163	16022
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16028	40.666	NaN	2470.7	30	0	187.16	0.106	+			27676	MPTVHYEF	8	65	512.2332949291134	1022.4520369250268	2	512.2330322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MPTVHYEF_	ENSG00000136518|ENST00000429709|ACTL6A;nc|ENSG00000136518|O96019-2|ACTL6A	31.954861631926434	0.7126016770032289	4				NaN	NaN	0	NaN	11863	4163	16022
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16029	40.667	NaN	1960.9	30	0	277.3	0.034			+	8996	EFTGHQAF	8	59	468.7137610467245	NaN	0	468.7140808105469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EFTGHQAF_	REV__ENSG00000116560|ENST00000357214|SFPQ;REV__nc|ENSG00000116560|P23246-2|SFPQ;REV__SFPQ|p.E489K|1|0.25|ENSG00000116560|chr1:35189333-35189333|C/T|missense_variant;REV__SFPQ|p.Y488H|1|0.28|ENSG00000116560|chr1:35189336-35189336|A/G|missense_variant	31.954861631926434	1.7418937515398478	4				NaN	NaN	0	NaN	11864	4163	16022
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16034	40.681	NaN	5261.4	30	0	728.36	0.214				-1	 	0	71	520.2919673632575	1038.569381793315	2	520.29296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11866	4166	16033
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16035	40.684	NaN	2594.9	30	0	108.57	0.106	+			19641	KDKLDQVII	9	69	536.3236425381067	1070.6327321430133	2	536.7619018554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KDKLDQVII_	ENSG00000135838|ENST00000367553|NPL;nc|ENSG00000135838|Q9BXD5-3|NPL;nc|ENSG00000135838|Q9BXD5-4|NPL	40.05817265558897	0.419577045485086	4				NaN	NaN	0	NaN	11867	4166	16033
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16036	40.686	NaN	2193.7	30	0	114.53	0.106	+			45285	TVRELVEAL	9	55	515.2999575818078	1028.5853622304155	2	515.3010864257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVRELVEAL_	ENSG00000109320|ENST00000226574|NFKB1;nc|ENSG00000109320|P19838-3|NFKB1;nc|ENSG00000109320|P19838|NFKB1;NFKB1|p.I888Sfs*8|1|0.09|ENSG00000109320|chr4:102613497-102613497|A/-|frameshift_variant	66.42927471994793	0.16001998865088202	4				NaN	NaN	0	NaN	11868	4166	16033
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16037	40.688	NaN	1937.6	30	0	130.57	0.106	+			11239	FIINNSLEK	9	62	539.3002318388891	1076.585910744578	2	539.3018798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FIINNSLEK_	ENSG00000164485|ENST00000296980|IL22RA2;nc|ENSG00000164485|Q969J5-2|IL22RA2	39.252832667884924	0.4290233611298554	4				NaN	NaN	0	NaN	11869	4166	16033
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16038	40.69	NaN	1718.1	30	0	161.6	0.037	+			51147	YNYPATLTPS	10	70	563.7736206054688	NaN	0	563.7736206054688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YNYPATLTPS_	ENSG00000197893|ENST00000359988|NRAP;nc|ENSG00000197893|Q86VF7-2|NRAP;nc|ENSG00000197893|Q86VF7-3|NRAP;nc|ENSG00000197893|Q86VF7-4|NRAP	34.172542307311794	0.38797011891751465	4				NaN	NaN	0	NaN	11870	4166	16033
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16042	40.703	NaN	3950.6	30	0	903.89	0.214				-1	 	0	61	479.3201911823655	956.625829431531	2	479.3204650878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11871	4169	16041
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16043	40.707	NaN	4546.8	30	0	1022.1	0.036				-1	EPLLFFGVM	9	72	534.7763634896659	1067.5381740461316	2	534.77734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_EPLLFFGVM(Oxidation (M))_	ENSG00000152104|ENST00000366956|PTPN14;PTPN14|p.I318Hfs*29|1|0.18|ENSG00000152104|chr1:214391023-214391024|-/G|frameshift_variant;PTPN14|p.M845Rfs*2|1|0.04|ENSG00000152104|chr1:214383321-214383322|-/TC|frameshift_variant;PTPN14|p.Y570Tfs*29|1|0.36|ENSG00000152104|chr1:214384148-214384148|G/-|frameshift_variant	40.5726180659479	0.4135428067754104	4				NaN	NaN	0	NaN	11872	4169	16041
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16047	40.72	NaN	6973	30	0	926.81	0.214	+			35523	SAVGHVFSL	9	70	458.7474120056379	915.4802710780758	2	458.7476806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAVGHVFSL_	ENSG00000164944|ENST00000297591|VIRMA;nc|ENSG00000164944|Q69YN4-2|VIRMA;nc|ENSG00000164944|Q69YN4-3|VIRMA;nc|ENSG00000164944|Q69YN4-4|VIRMA	76.7741389293348	0.11149722112137898	4				NaN	NaN	0	NaN	11873	4172	16046
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16048	40.724	NaN	5107.5	30	0	582.07	0.106	+			48482	VTMGFTGFGK	10	75	522.7619890660541	1043.509425198908	2	522.7626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTMGFTGFGK_	ENSG00000082068|ENST00000265107|WDR70;ENST00000505799.1_1_5:37379427-37381852:+|nuORF;ENST00000508973.5_1_5:21459626-21473494:+|nuORF;ENST00000509649.5_1_5:21459626-21462031:+|nuORF;ENST00000607545.5_1_5:21459668-21501934:+|nuORF;WDR70|p.E64Rfs*4|1|0.3|ENSG00000082068|chr5:37392009-37392009|A/-|frameshift_variant;WDR70|p.V333Sfs*15|1|0.33|ENSG00000082068|chr5:37605137-37605137|A/-|frameshift_variant	68.84614121027924	0.2867470276772903	4				NaN	NaN	0	NaN	11874	4172	16046
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16049	40.726	NaN	4069.7	30	0	426.1	0.106			+	11771	FSLGLSVLNQ	10	72	539.3002318388891	1076.585910744578	2	539.3021850585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FSLGLSVLNQ_	REV__ZNF667|p.R48Q|1|0.5|ENSG00000198046|chr19:56460706-56460706|C/T|missense_variant	53.08895987439943	0.42869529153390606	4				NaN	NaN	0	NaN	11875	4172	16046
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16050	40.728	NaN	2287.3	30	0	586.88	0.106				-1	 	0	33	336.5337320249258	1006.5793666749776	3	336.5341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11876	4172	16046
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16051	40.73	NaN	2302	30	0	218.57	0.106	+			31505	QLERRKEE	8	70	544.2988632295854	NaN	0	544.2991943359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QLERRKEE_	ENSG00000137941|ENST00000260505|TTLL7;ENST00000472688.5_1_1:84383321-84408355:-|nuORF;ENST00000488014.5_1_1:84386258-84403687:-|nuORF;nc|ENSG00000137941|Q6ZT98-2|TTLL7;nc|ENSG00000137941|Q6ZT98-3|TTLL7;TTLL7|p.T522Lfs*19|1|0.33|ENSG00000137941|chr1:83917627-83917627|T/-|frameshift_variant	32.81241826257853	1.7418937515398478	4				NaN	NaN	0	NaN	11877	4172	16046
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16052	40.731	NaN	4421.4	30	0	335.82	0.106			+	-1	LMKFLDALQ	9	76	547.800812785479	NaN	0	547.801025390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_LM(Oxidation (M))KFLDALQ_	REV__ENST00000483509.1_1_2:61319655-61320429:+|nuORF	51.33545320467046	0.19748963086191895	4				NaN	NaN	0	NaN	11878	4172	16046
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16053	40.733	NaN	1517.9	30	0	182.7	0.034			+	25673	LREAPTKI	8	52	464.2843258116573	NaN	0	464.28424072265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LREAPTKI_	REV__ENSG00000169203|ENST00000550665|NPIPB12;REV__ENSG00000169203|ENST00000550665|NPIPB12;REV__ENSG00000169203|ENST00000550665|NPIPB12;REV__ENSG00000169203|ENST00000550665|NPIPB12;REV__ENSG00000169246|ENST00000542817|NPIPB3;REV__ENSG00000169246|ENST00000542817|NPIPB3;REV__ENSG00000169246|ENST00000542817|NPIPB3;REV__ENSG00000185864|ENST00000682606|NPIPB4;REV__ENSG00000185864|ENST00000682606|NPIPB4;REV__ENSG00000185864|ENST00000682606|NPIPB4;REV__ENSG00000185864|ENST00000682606|NPIPB4;REV__ENSG00000185864|ENST00000682606|NPIPB4;REV__ENSG00000185864|ENST00000682606|NPIPB4;REV__ENSG00000185864|ENST00000682606|NPIPB4;REV__ENSG00000185864|ENST00000682606|NPIPB4;REV__ENSG00000185864|ENST00000682606|NPIPB4;REV__ENSG00000185864|ENST00000682606|NPIPB4;REV__ENSG00000185864|ENST00000682606|NPIPB4;REV__ENSG00000198064|ENST00000697092|NPIPB13;REV__ENSG00000198064|ENST00000697092|NPIPB13;REV__ENSG00000198064|ENST00000697092|NPIPB13;REV__ENSG00000198064|ENST00000697092|NPIPB13;REV__ENSG00000198064|ENST00000697092|NPIPB13;REV__ENSG00000198064|ENST00000697092|NPIPB13;REV__ENSG00000198064|ENST00000697092|NPIPB13;REV__ENSG00000198064|ENST00000697092|NPIPB13;REV__ENSG00000198064|ENST00000697092|NPIPB13;REV__ENSG00000198064|ENST00000697092|NPIPB13;REV__ENSG00000243716|ENST00000424340|NPIPB5;REV__ENSG00000243716|ENST00000424340|NPIPB5;REV__ENSG00000243716|ENST00000424340|NPIPB5;REV__ENSG00000243716|ENST00000424340|NPIPB5;REV__ENSG00000243716|ENST00000424340|NPIPB5;REV__ENSG00000243716|ENST00000424340|NPIPB5;REV__ENSG00000243716|ENST00000424340|NPIPB5;REV__ENSG00000254206|ENST00000698511|NPIPB11;REV__ENSG00000254206|ENST00000698511|NPIPB11;REV__ENSG00000254206|ENST00000698511|NPIPB11;REV__ENSG00000254206|ENST00000698511|NPIPB11;REV__ENSG00000254206|ENST00000698511|NPIPB11;REV__nc|ENSG00000169246|Q92617-2|NPIPB3;REV__nc|ENSG00000169246|Q92617-2|NPIPB3;REV__nc|ENSG00000169246|Q92617-2|NPIPB3;REV__nc|ENSG00000169246|Q92617-2|NPIPB3;REV__nc|ENSG00000169246|Q92617-3|NPIPB3;REV__nc|ENSG00000169246|Q92617-3|NPIPB3;REV__nc|ENSG00000169246|Q92617-3|NPIPB3;REV__nc|ENSG00000169246|Q92617-3|NPIPB3;REV__nc|ENSG00000169246|Q92617-3|NPIPB3;REV__nc|ENSG00000169246|Q92617-3|NPIPB3;REV__nc|ENSG00000169246|Q92617-5|NPIPB3;REV__nc|ENSG00000169246|Q92617-5|NPIPB3;REV__nc|ENSG00000169246|Q92617-6|NPIPB3;REV__nc|ENSG00000169246|Q92617-6|NPIPB3;REV__nc|ENSG00000169246|Q92617-6|NPIPB3;REV__nc|ENSG00000169246|Q92617-6|NPIPB3;REV__nc|ENSG00000169246|Q92617-6|NPIPB3;REV__nc|ENSG00000169246|Q92617-6|NPIPB3;REV__nc|ENSG00000169246|Q92617-6|NPIPB3;REV__nc|ENSG00000169246|Q92617|NPIPB3;REV__nc|ENSG00000169246|Q92617|NPIPB3;REV__nc|ENSG00000169246|Q92617|NPIPB3;REV__nc|ENSG00000169246|Q92617|NPIPB3;REV__nc|ENSG00000169246|Q92617|NPIPB3;REV__nc|ENSG00000169246|Q92617|NPIPB3;REV__nc|ENSG00000169246|Q92617|NPIPB3;REV__nc|ENSG00000243716|C9JG80|NPIPB4;REV__nc|ENSG00000243716|C9JG80|NPIPB4;REV__nc|ENSG00000243716|C9JG80|NPIPB4;REV__nc|ENSG00000243716|C9JG80|NPIPB4;REV__nc|ENSG00000243716|C9JG80|NPIPB4;REV__nc|ENSG00000243716|C9JG80|NPIPB4;REV__nc|ENSG00000243716|C9JG80|NPIPB4;REV__nc|ENSG00000243716|C9JG80|NPIPB4	32.81241826257853	1.7418937515398478	4				NaN	NaN	0	NaN	11879	4172	16046
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16057	40.747	NaN	7376.4	30	0	841.38	0.214				-1	 	0	72	517.2867888273969	1032.5590247215937	2	517.287841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11880	4175	16056
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16058	40.75	NaN	6131.4	30	0	852.28	0.106	+			43013	TEKQLQVLL	9	75	536.3236425381067	1070.6327321430133	2	536.324462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEKQLQVLL_	ENSG00000120800|ENST00000261637|UTP20	69.6276240434122	0.14239879520340665	4				NaN	NaN	0	NaN	11881	4175	16056
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16059	40.752	NaN	3045.8	30	0	311.71	0.035			+	48951	VVFAALSVW	9	65	496.28563662644746	NaN	0	496.28546142578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVFAALSVW_	REV__ENSG00000170262|ENST00000303645|MRAP;REV__nc|ENSG00000170262|Q8TCY5-1|MRAP;REV__nc|ENSG00000170262|Q8TCY5-2|MRAP	40.5726180659479	0.27166212580479165	4				NaN	NaN	0	NaN	11882	4175	16056
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16064	40.766	NaN	8449.3	30	0	893.24	0.214	+			36268	SENNRIFTL	9	71	547.2846641494638	1092.5547753657274	2	547.2857666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SENNRIFTL_	ENSG00000156110|ENST00000539909|ADK;nc|ENSG00000156110|P55263-2|ADK;nc|ENSG00000156110|P55263-4|ADK	75.04331003522576	0.118981335847003	4				NaN	NaN	0	NaN	11884	4178	16063
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16065	40.769	NaN	7279.5	30	0	518.79	0.106	+			50942	YHGTTGILY	9	72	512.7597937226823	1023.5050345121646	2	512.7608642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YHGTTGILY_	ENSG00000144063|ENST00000272462|MALL;ENST00000568189.5_1_2:111003217-111043255:+|nuORF	53.351449002276354	0.2690372970092375	4				NaN	NaN	0	NaN	11885	4178	16063
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16066	40.771	NaN	3200.2	30	0	645.54	0.106				-1	 	0	55	433.75210568107997	865.48965842896	2	433.7524719238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11886	4178	16063
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16067	40.773	NaN	3106.7	30	0	185.62	0.036	+			30208	PSRFGQTCPL	10	78	553.2748066909669	1104.5350604487337	2	553.275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PSRFGQTCPL_	ENST00000481185.1_1_21:38072046-38117571:+|nuORF;nc|ENSG00000159263|Q14190-2|SIM2	42.86426827375447	0.522752283233888	4				NaN	NaN	0	NaN	11887	4178	16063
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16073	40.789	NaN	8769.6	30	0	1767.7	0.215	+			7308	DASKVVTVF	9	61	483.2681730533023	964.5217931734046	2	483.268310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DASKVVTVF_	ENSG00000071127|ENST00000499869|WDR1;ENST00000502962.5_1_4:10077004-10094774:-|nuORF;ENST00000515743.5_1_4:10078742-10093271:-|nuORF;nc|ENSG00000071127|O75083-3|WDR1	112.2953585152457	0.026655838328212944	4				NaN	NaN	0	NaN	11890	4181	16072
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16074	40.792	NaN	8063.9	30	0	1101.5	0.106	+			17094	HSEDEIEY	8	75	511.20868570595957	1020.4028184787192	2	511.2093200683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HSEDEIEY_	ENSG00000122025|ENST00000241453|FLT3;ENST00000380987.2_1_13:28578191-28599431:-|nuORF;nc|ENSG00000122025|P36888-2|FLT3	40.5726180659479	0.6527593143185008	4				NaN	NaN	0	NaN	11891	4181	16072
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16075	40.794	NaN	1785.3	30	0	115.86	0.106				-1	 	0	52	347.1982704583101	692.3819879834202	2	347.1984558105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11892	4181	16072
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16076	40.796	NaN	1559.1	30	0	179.11	0.106				-1	 	0	52	446.23172807042823	890.4489032076565	2	446.23211669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11893	4181	16072
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16077	40.798	NaN	2641.5	30	0	135.43	0.106			+	-1	LPVLVQAAVM	10	66	528.8104858570755	1055.606418780951	2	528.8125610351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_LPVLVQAAVM(Oxidation (M))_	REV__ABCA3|p.G1334Afs*12|1|0.4|ENSG00000167972|chr16:2283220-2283220|C/-|frameshift_variant;REV__ENSG00000167972|ENST00000301732|ABCA3	31.954861631926434	0.6188749698950511	4				NaN	NaN	0	NaN	11894	4181	16072
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16078	40.8	NaN	4461.2	30	0	210.6	0.036	+			43245	TEWEKVAQL	9	75	552.2896936197556	1102.564834306311	2	552.2899169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TEWEKVAQL_	ENSG00000175416|ENST00000310418|CLTB;nc|ENSG00000175416|P09497-2|CLTB	62.107414245175825	0.1960472003779324	4				NaN	NaN	0	NaN	11895	4181	16072
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16083	40.814	NaN	22475	30	0	3512.1	0.214	+			40637	SVAQLLLSK	9	78	479.7995909294421	957.5846289256842	2	479.7998352050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVAQLLLSK_	ENSG00000073614|ENST00000399788|KDM5A;ENST00000541335.1_1_12:431581-432275:-|nuORF;KDM5A|p.G1200Dfs*9|1|0.28|ENSG00000073614|chr12:307787-307787|T/-|frameshift_variant;KDM5A|p.V1093*|1|0.32|ENSG00000073614|chr12:309905-309905|T/-|frameshift_variant;KDM5A|p.V1093Sfs*20|1|0.21|ENSG00000073614|chr12:309904-309905|-/T|frameshift_variant;nc|ENSG00000073614|P29375-2|KDM5A	102.0615471778698	0.03709830720253279	4				NaN	NaN	0	NaN	11897	4184	16082
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16084	40.818	NaN	3079.4	30	0	370.1	0.106	+			3251	ASLGFLVAK	9	59	453.27586004094803	904.5371671486961	2	453.2760314941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASLGFLVAK_	ENSG00000197363|ENST00000359971|ZNF517;ZNF517|p.C121Afs*105|2|0.1|ENSG00000197363|chr8:144807272-144807272|G/-|frameshift_variant	107.00750918261382	0.032051501805654005	4				NaN	NaN	0	NaN	11898	4184	16082
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16085	40.819	NaN	2942.4	30	0	247.99	0.106			+	1292	AESLINAFK	9	63	496.7733076905029	991.5320624478059	2	497.77264404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AESLINAFK_	REV__ACSM3|p.T549Nfs*29|2|0.31|ENSG00000005187|chr16:20796453-20796454|-/A|frameshift_variant;REV__ENSG00000005187|ENST00000289416|ACSM3;REV__nc|ENSG00000005187|Q53FZ2-2|ACSM3	34.172542307311794	0.4838870758800184	4				NaN	NaN	0	NaN	11899	4184	16082
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16086	40.821	NaN	5871.8	30	0	858.72	0.106	+			31689	QNKYIGESL	9	72	526.2743735368211	1050.5341941404422	2	526.2752075195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QNKYIGESL_	ENSG00000160294|ENST00000291688|MCM3AP;ENST00000486937.5_1_21:47666536-47687014:-|nuORF;ENST00000496607.5_1_21:47655184-47686088:-|nuORF	51.33545320467046	0.2872990594074956	4				NaN	NaN	0	NaN	11900	4184	16082
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16087	40.823	NaN	4376.4	30	0	439.81	0.106	+			5569	AVAQNLSFCF	10	77	578.7756184733431	1155.5366840134861	2	578.8319091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_AVAQNLSFC(Carbamidomethyl (C))F_	ENST00000498213.1_1_10:75335912-75335963:-|nuORF	56.72105179125745	0.3956618550748046	4				NaN	NaN	0	NaN	11901	4184	16082
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16088	40.825	NaN	1875.3	30	0	469.84	0.106	+			23211	KYGAILSQK	9	63	504.2963244418399	1006.5780959504798	2	504.2983703613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KYGAILSQK_	ENSG00000166450|ENST00000389286|PRTG	45.97224482568171	0.3502073465782774	4				NaN	NaN	0	NaN	11902	4184	16082
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16089	40.827	NaN	2301.3	30	0	242.54	0.034			+	17387	IANTVVSII	9	58	465.28653895397747	NaN	0	465.2875671386719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IANTVVSII_	REV__ENST00000474293.2_1_6:127775237-127796815:-|nuORF	71.87747018426188	0.0992163553043454	4				NaN	NaN	0	NaN	11903	4184	16082
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16094	40.932	NaN	17938	30	0	3140.6	0.214				-1	 	0	74	486.2916773743263	970.5688018154526	2	486.2918701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11905	4187	16093
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16095	40.935	NaN	9167.4	30	0	1313	0.106	+			33858	RRKINSTY	8	74	519.2967706391903	1036.5789883451805	2	519.2974853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RRKINSTY_	nc|ENSG00000108352|Q9UHV5-3|RAPGEFL1	53.351449002276354	0.5676011784961348	4				NaN	NaN	0	NaN	11906	4187	16093
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16096	40.937	NaN	7783	30	0	855.61	0.106				-1	 	0	78	472.78111202954	943.54767112588	2	472.7814025878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11907	4187	16093
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16097	40.939	NaN	5976.4	30	0	2407.5	0.106			+	25930	LSGVTILDIPG	11	71	542.8152145023278	1083.6158760714554	2	542.8160400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSGVTILDIPG_	REV__ENSG00000198879|ENST00000397167|SFMBT2	45.97224482568171	0.4762245054624163	4				NaN	NaN	0	NaN	11908	4187	16093
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16098	40.941	NaN	5040.1	30	0	1120.3	0.106	+			5478	AVAAFVLYK	9	66	491.29153706976706	980.5685212063341	2	491.2919006347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVAAFVLYK_	CCDC107|p.A74V|1|0.5|ENSG00000159884|chr9:35658690-35658690|C/T|missense_variant;ENSG00000159884|ENST00000426546|CCDC107;nc|ENSG00000159884|Q8WV48-2|CCDC107;nc|ENSG00000159884|Q8WV48-3|CCDC107;nc|ENSG00000159884|Q8WV48-4|CCDC107;nc|ENSG00000159884|Q8WV48-5|CCDC107	122.1759843771914	0.019882474861609503	4				NaN	NaN	0	NaN	11909	4187	16093
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16099	40.943	NaN	2071	30	0	193.81	0.106	+			46600	VFRVGSVL	8	58	438.76818331842185	875.5218137036437	2	438.7684020996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VFRVGSVL_	ENSG00000073578|ENST00000264932|SDHA;ENST00000503674.5_1_5:250762-256532:+|nuORF;ENST00000505555.5_1_5:218470-251793:+|nuORF;ENST00000509082.1_1_5:240570-256462:+|nuORF;ENST00000515467.2_1_5:1572396-1576767:-|nuORF;ENST00000515752.5_1_5:236500-256532:+|nuORF;nc|ENSG00000073578|P31040-2|SDHA;nc|ENSG00000073578|P31040-3|SDHA	79.45101966838831	0.3281480470254892	4				NaN	NaN	0	NaN	11910	4187	16093
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16100	40.944	NaN	2779.7	30	0	617.77	0.035	+			5725	AVFPPLIQK	9	54	506.81261686415513	1011.6106807951103	2	506.812255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AVFPPLIQK_	ENST00000355192.7_1_12:65857378-65857441:+|nuORF	54.776311868738084	0.25715957988447635	4				NaN	NaN	0	NaN	11911	4187	16093
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16107	40.962	NaN	5308.6	30	0	338.66	0.214	+			36253	SENINAVTL	9	71	480.75264370947264	959.4907344857453	2	480.7530822753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SENINAVTL_	ENSG00000144674|ENST00000361924|GOLGA4;GOLGA4|p.N1805Kfs*18|1|0.11|ENSG00000144674|chr3:37327293-37327294|-/A|frameshift_variant;GOLGA4|p.N1805Tfs*6|1|0.38|ENSG00000144674|chr3:37327294-37327294|A/-|frameshift_variant;nc|ENSG00000144674|Q13439-3|GOLGA4;nc|ENSG00000144674|Q13439-4|GOLGA4;nc|ENSG00000144674|Q13439-5|GOLGA4	76.16968421966216	0.11411088698345859	4				NaN	NaN	0	NaN	11915	4190	16106
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16108	40.966	NaN	2334.5	30	0	257.76	0.106	+			27954	MVIPRMVIS	9	67	523.2974365126174	1044.5803200920348	2	523.2981567382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MVIPRMVIS_	ENST00000468700.1_1_3:23996165-23996213:+|nuORF	40.77816245573522	0.41113185337114944	4				NaN	NaN	0	NaN	11916	4190	16106
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16109	40.968	NaN	2522.1	30	0	199.1	0.106	+			29220	NVVKLLGEQY	10	66	581.826212134004	1161.6378713348079	2	581.8267822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NVVKLLGEQY_	ENSG00000133884|ENST00000528416|DPF2;ENST00000444314.6_1_11:65101357-65109054:+|nuORF;nc|ENSG00000133884|Q92785-2|DPF2	72.87924865735499	0.25379688738724415	4				NaN	NaN	0	NaN	11917	4190	16106
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16110	40.97	NaN	2095.2	30	0	253.52	0.106				-1	AFDRYVAIC	9	68	578.7756184733431	1155.5366840134861	2	578.7762451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))AFDRYVAIC(Carbamidomethyl (C))_	ENSG00000136839|ENST00000259362|OR13C9;ENSG00000148136|ENST00000277216|OR13C4;ENSG00000167332|ENST00000396950|OR51E2;ENSG00000176230|ENST00000641386|OR4K17;ENSG00000176246|ENST00000315683|OR4L1;ENSG00000180785|ENST00000396952|OR51E1;ENSG00000181023|ENST00000317121|OR56B1;ENSG00000181609|ENST00000322641|OR52D1;ENSG00000181963|ENST00000325719|OR52K2;ENSG00000184140|ENST00000328882|OR4F6;ENSG00000187747|ENST00000345043|OR52B6;ENSG00000196778|ENST00000641528|OR52K1;ENSG00000197532|ENST00000641622|OR6Y1;ENSG00000197790|ENST00000360213|OR52M1;ENSG00000204246|ENST00000641090|OR13C3;ENSG00000226288|ENST00000641896|OR52I2;ENSG00000232268|ENST00000530443|OR52I1;ENSG00000276119|ENST00000542196|OR13C2;ENSG00000277556|ENST00000374779|OR13C5;ENSG00000278889|ENST00000341959|OR2S2;ENSG00000280021|ENST00000624103|OR51F1;ENST00000531655.1_1_11:4496080-4496773:+|nuORF;nc|ENSG00000176748|P0C646|OR52Z1P;nc|ENSG00000179443|Q8NH95|OR13C6P;nc|ENSG00000181109|Q8NH57|OR52P1;nc|ENSG00000204246|Q8NGS6|OR13C3;nc|ENSG00000226288|Q8NH67|OR52I2;nc|ENSG00000243641|P0DN81|OR13C7;OR13C3|p.F246Sfs*13|1|0.31|ENSG00000204246|chr9:104536077-104536077|A/-|frameshift_variant;OR13C4|p.K186Nfs*2|1|0.13|ENSG00000148136|chr9:104526652-104526652|T/-|frameshift_variant;OR13C5|p.T246Rfs*4|1|0.03|ENSG00000277556|chr9:104598679-104598680|-/TT|frameshift_variant;OR4K17|p.K331Nfs*7|1|0.2|ENSG00000176230|chr14:20118394-20118394|A/-|frameshift_variant;OR4L1|p.L154Yfs*4|1|0.11|ENSG00000176246|chr14:20060500-20060500|T/-|frameshift_variant;OR51E2|p.F156Sfs*6|2|0.36|ENSG00000167332|chr11:4682245-4682245|A/-|frameshift_variant;OR51E2|p.F167Sfs*17|1|0.07|ENSG00000167332|chr11:4682214-4682214|G/-|frameshift_variant;OR52D1|p.F162Sfs*5|1|0.31|ENSG00000181609|chr11:5489185-5489185|C/-|frameshift_variant;OR52I1|p.K132N|1|0.07|ENSG00000232268|chr11:4594434-4594434|G/C|missense_variant	37.15910966729921	0.4535818937225704	4				NaN	NaN	0	NaN	11918	4190	16106
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16111	40.971	NaN	2688.3	30	0	447.16	0.035			+	27571	MPFLLICR	8	56	496.7733076905029	991.5320624478059	2	496.77398681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MPFLLICR_	REV__SEMA5A|p.Q919R|1|0.18|ENSG00000112902|chr5:9051962-9051962|T/C|missense_variant	68.484700416344	0.4195245774506064	4				NaN	NaN	0	NaN	11919	4190	16106
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16122	40.997	NaN	6341.6	30	0	1037.7	0.214			+	6924	CMMGGPMVHG	10	65	518.1981475795558	1034.3817422259115	2	518.1993408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_CMM(Oxidation (M))GGPMVHG_	REV__DIP2B|p.A1021Cfs*11|1|0.32|ENSG00000066084|chr12:50721279-50721280|-/CTGTATGCAC|frameshift_variant;REV__DIP2B|p.I979Afs*17|1|0.13|ENSG00000066084|chr12:50718790-50718815|AAATAGAAGAGAATGATTTGGTGAGG/-|frameshift_variant;REV__DIP2B|p.V1240Dfs*9|1|0.05|ENSG00000066084|chr12:50731445-50731446|-/ATATTTAC|frameshift_variant;REV__DIP2B|p.V893Gfs*91|1|0.06|ENSG00000066084|chr12:50714417-50714418|-/G|frameshift_variant;REV__ENSG00000066084|ENST00000301180|DIP2B	65.89745868150666	0.31220354485832413	4				NaN	NaN	0	NaN	11927	4193	16121
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16123	41	NaN	6298.5	30	0	368.94	0.106			+	36063	SEIVSAIKL	9	74	480.2918706845802	958.5691884359604	2	480.2919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEIVSAIKL_	REV__ENSG00000204851|ENST00000599531|PNMA8B	75.04331003522576	0.118981335847003	4				NaN	NaN	0	NaN	11928	4193	16121
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16124	41.002	NaN	3645.2	30	0	187.35	0.106	+			50777	YEKTIAQMI	9	65	548.7889598586131	1095.5633667840261	2	548.7893676757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YEKTIAQMI_	ENSG00000138162|ENST00000369005|TACC2;ENSG00000147526|ENST00000317827|TACC1;ENST00000522752.5_1_8:38614850-38697853:+|nuORF;nc|ENSG00000138162|O95359-1|TACC2;nc|ENSG00000138162|O95359-2|TACC2;nc|ENSG00000138162|O95359-3|TACC2;nc|ENSG00000138162|O95359-5|TACC2;nc|ENSG00000138162|O95359-6|TACC2;nc|ENSG00000147526|O75410-10|TACC1;nc|ENSG00000147526|O75410-2|TACC1;nc|ENSG00000147526|O75410-3|TACC1;nc|ENSG00000147526|O75410-4|TACC1;nc|ENSG00000147526|O75410-5|TACC1;nc|ENSG00000147526|O75410-6|TACC1;nc|ENSG00000147526|O75410-7|TACC1;nc|ENSG00000147526|O75410-9|TACC1	85.86182877749512	0.07653218437724067	4				NaN	NaN	0	NaN	11929	4193	16121
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16125	41.004	NaN	3290.1	30	0	233.66	0.106				-1	 	0	66	369.21149781874055	736.4084427042811	2	369.211669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11930	4193	16121
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16126	41.006	NaN	2320.2	30	0	231.71	0.106			+	23623	LAPSRGSMTTY	11	72	600.2895397580315	1198.564526582863	2	600.289794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_LAPSRGSM(Oxidation (M))TTY_	REV__ENSG00000183317|ENST00000373048|EPHA10;REV__ENST00000446149.6_1_1:38181546-38201012:-|nuORF;REV__EPHA10|p.R869Gfs*10|1|0.12|ENSG00000183317|chr1:37719566-37719566|G/-|frameshift_variant;REV__nc|ENSG00000183317|Q5JZY3-3|EPHA10	68.84614121027924	0.24535906747804975	4				NaN	NaN	0	NaN	11931	4193	16121
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16127	41.008	NaN	2528.7	30	0	337.58	0.035			+	24381	LFSPITTKL	9	68	510.309774720199	1018.604996507198	2	510.3100891113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LFSPITTKL_	REV__tr|U7T041|U7T041_FUSNUNa+/H+antiporterNhaCOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00718PE=3SV=1	35.61828744233558	0.47037581924408073	4				NaN	NaN	0	NaN	11932	4193	16121
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16128	41.008	NaN	3866.6	30	0	620.7	0.14	+			27178	MDMRVPAQL	9	65	530.7661723239711	1059.517791714742	2	530.765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MDMRVPAQL_	nc|ENSG00000211633|A0A075B6H8|IGKV1D-42;nc|ENSG00000239819|A0A087WSZ0|IGKV1D-8;nc|ENSG00000239855|A0A0C4DH72|IGKV1-6;nc|ENSG00000240382|P01599|IGKV1-17;nc|ENSG00000241755|A0A0C4DH69|IGKV1-9;nc|ENSG00000242076|P01594|IGKV1-33;nc|ENSG00000242766|A0A075B6S4|IGKV1D-17;nc|ENSG00000243290|A0A0C4DH73|IGKV1-12;nc|ENSG00000243466|P01602|IGKV1-5;nc|ENSG00000244575|A0A075B6S5|IGKV1-27;nc|ENSG00000250036|P0DSN7|IGKV1D-37;nc|ENSG00000251546|P04432|IGKV1D-39;nc|ENSG00000276566|P0DP09|IGKV1-13	56.43379154798735	0.2433427591689151	4				NaN	NaN	0	NaN	11933	4193	16121
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16132	41.024	NaN	2971.7	30	0	327.34	0.214	+			16912	HPLGRPLL	8	52	451.78097501140087	NaN	0	451.7809143066406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HPLGRPLL_	CABP4|p.L48Sfs*84|1|0.22|ENSG00000175544|chr11:67455560-67455560|G/-|frameshift_variant	62.97842346883844	1.7418937515398478	4				NaN	NaN	0	NaN	11934	4196	16131
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16133	41.028	NaN	1634	30	0	171.23	0.106	+			1353	AEVDLPKL	8	55	442.7574456426674	883.5003383521348	2	442.7570495605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEVDLPKL_	ENSG00000104872|ENST00000262265|PIH1D1;ENST00000595633.5_1_19:49949641-49950433:-|nuORF;ENST00000601053.5_2_19:49950039-49952749:-|nuORF;PIH1D1|p.Q250Sfs*6|1|0.25|ENSG00000104872|chr19:49446634-49446634|G/-|frameshift_variant	54.776311868738084	0.5534952410049249	4				NaN	NaN	0	NaN	11935	4196	16131
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16134	41.029	NaN	2067.5	30	0	237.69	0.036	+			50657	YEEAALRCY	9	68	559.2508210125004	1116.4870890918007	2	559.2509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YEEAALRCY_	ENSG00000188070|ENST00000433688|ZFTA	34.172542307311794	0.4838870758800184	4				NaN	NaN	0	NaN	11936	4196	16131
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16139	41.044	NaN	2701.9	30	0	136.6	0.214	+			46564	VFKPISSTW	9	70	532.792046646287	1063.5695403593738	2	532.792724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VFKPISSTW_	BIRC6|p.K3585Sfs*8|1|0.32|ENSG00000115760|chr2:32515171-32515171|A/-|frameshift_variant;BIRC6|p.S2648Ffs*25|1|0.08|ENSG00000115760|chr2:32487769-32487770|-/T|frameshift_variant;BIRC6|p.S3504Mfs*5|1|0.15|ENSG00000115760|chr2:32513095-32513098|TAGT/-|frameshift_variant;ENSG00000115760|ENST00000421745|BIRC6	60.11826168202944	0.21262886028301267	4				NaN	NaN	0	NaN	11938	4199	16138
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16140	41.048	NaN	2054.5	30	0	152.33	0.106	+			36247	SEMVTIKL	8	58	460.759941596303	NaN	0	460.75909423828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEMVTIKL_	ENSG00000124201|ENST00000396105|ZNFX1	104.74654710444128	1.7418937515398478	4				NaN	NaN	0	NaN	11939	4199	16138
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16141	41.049	NaN	2148.6	30	0	173.54	0.106			+	33214	RFHTLMVF	8	65	525.7827817256245	NaN	0	525.783447265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RFHTLMVF_	REV__ENST00000370713.5_1_1:82372818-82372908:+|nuORF	37.028477286268924	1.7418937515398478	4				NaN	NaN	0	NaN	11940	4199	16138
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16142	41.051	NaN	2099.7	30	0	173.05	0.106				-1	AYLWADKY	8	58	536.2606369526477	NaN	0	536.2630004882812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))AYLWADKY_	CACTIN|p.R641H|1|0.4|ENSG00000105298|chr19:3612278-3612278|C/T|missense_variant;ENSG00000105298|ENST00000429344|CACTIN;nc|ENSG00000105298|Q8WUQ7-2|CACTIN	45.9519527083369	1.7418937515398478	4				NaN	NaN	0	NaN	11941	4199	16138
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16143	41.053	NaN	2366.4	30	0	460.02	0.036			+	37497	SLKYSACAVI	10	64	527.7824456886038	NaN	0	527.7825317382812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SLKYSACAVI_	REV__CON__Q1A7A4	53.08895987439943	0.2860736266326207	4				NaN	NaN	0	NaN	11942	4199	16138
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16147	41.067	NaN	8240.5	30	0	1568.7	0.214			+	13616	GLYLGSIMK	9	64	491.2747211755028	980.5348894178056	2	491.275146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GLYLGSIMK_	REV__ENSG00000156510|ENST00000354624|HKDC1;REV__nc|ENSG00000156510|Q2TB90-2|HKDC1;REV__nc|ENSG00000156510|Q2TB90-3|HKDC1	101.60071028292904	0.0375685401170269	4				NaN	NaN	0	NaN	11943	4202	16146
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16148	41.071	NaN	2693.4	30	0	593.11	0.106				-1	 	0	46	336.5337320249258	1006.5793666749776	3	336.53411865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11944	4202	16146
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16149	41.073	NaN	2633.4	30	0	272.39	0.106	+			24274	LEVLVKTL	8	51	457.7991639192509	913.5837749053018	2	457.8000793457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LEVLVKTL_	BAG6|p.A35Pfs*3|1|0.35|ENSG00000204463|chr6:31651661-31651661|C/-|frameshift_variant;ENSG00000204463|ENST00000676615|BAG6;nc|ENSG00000204463|P46379-2|BAG6;nc|ENSG00000204463|P46379-4|BAG6;nc|ENSG00000204463|P46379-5|BAG6;nc|ENSG00000204463|P46379|BAG6	67.49366992349736	0.4277823096851425	4				NaN	NaN	0	NaN	11945	4202	16146
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16150	41.074	NaN	2105.1	30	0	320.9	0.036	+			34491	RVDSKQMNL	9	65	545.7866747199535	1089.5587965067068	2	545.7884521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RVDSKQMNL_	CHST15|p.K78Efs*4|1|0.19|ENSG00000182022|chr10:124045981-124045982|-/C|frameshift_variant;ENSG00000182022|ENST00000435907|CHST15;nc|ENSG00000182022|Q7LFX5-2|CHST15	26.69291269510374	0.5537881896960711	4				NaN	NaN	0	NaN	11946	4202	16146
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16156	41.09	NaN	3885.9	30	0	273.14	0.214	+			8675	EDVKMITSL	9	64	518.272591260671	1034.530629588142	2	518.2733764648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EDVKMITSL_	ENSG00000073111|ENST00000265056|MCM2;ENST00000474964.5_1_3:127323572-127340613:+|nuORF;ENST00000477668.5_1_3:127323572-127337961:+|nuORF	74.25504064058377	0.12238981753128622	4				NaN	NaN	0	NaN	11949	4205	16155
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16157	41.094	NaN	3162.9	30	0	296.42	0.106	+			47297	VNLDHPVIY	9	69	535.2864452443608	1068.5583375555216	2	535.2877807617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VNLDHPVIY_	HGF|p.S486Y|1|0.36|ENSG00000019991|chr7:81710231-81710231|G/T|missense_variant	39.252832667884924	0.4290233611298554	4				NaN	NaN	0	NaN	11950	4205	16155
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16158	41.096	NaN	2438.6	30	0	254.08	0.106	+			47203	VMALKGLGKP	10	63	515.3091841489904	1028.6038153647808	2	515.3096313476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_VM(Oxidation (M))ALKGLGKP_	ENST00000526145.6_2_11:128332223-128332259:-|nuORF	40.77816245573522	0.5419747034533848	4				NaN	NaN	0	NaN	11951	4205	16155
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16159	41.098	NaN	1363.9	30	0	69.77	0.106	+			36248	SEMVTIKL	8	53	460.759941596303	NaN	0	460.7605895996094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SEMVTIKL_	ENSG00000124201|ENST00000396105|ZNFX1	66.42927471994793	1.7418937515398478	4				NaN	NaN	0	NaN	11952	4205	16155
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16160	41.1	NaN	2130.7	30	0	619.11	0.106			+	7223	DAKFYAIK	8	63	478.26542817746633	954.5163034217327	2	478.2655334472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DAKFYAIK_	REV__tr|U7SFN9|U7SFN9_FUSNULipopolysaccharideheptosyltransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02362PE=4SV=1	55.50420428727701	0.5462892107279674	4				NaN	NaN	0	NaN	11953	4205	16155
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16161	41.101	NaN	2018.3	30	0	152.67	0.106			+	22542	KTRRCGVGFA	10	63	547.796721667671	1093.578890402142	2	548.2990112304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KTRRCGVGFA_	REV__ENST00000359238.6_2_17:46185151-46189939:+|nuORF;REV__ENST00000578861.5_1_17:46184933-46189448:+|nuORF;REV__ENST00000580875.1_1_17:46185151-46189448:+|nuORF	37.81151784470057	0.569310847604193	4				NaN	NaN	0	NaN	11954	4205	16155
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16162	41.103	NaN	1688.9	30	0	176.6	0.039	+			7725	DLSPRCLILRN	11	63	650.3656708490281	1298.7167887648561	2	650.3681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DLSPRCLILRN_	ENSG00000156970|ENST00000287598|BUB1B;nc|ENSG00000156970|O60566-2|BUB1B;nc|ENSG00000156970|O60566-3|BUB1B	58.22992032128504	0.3392555181951113	4				NaN	NaN	0	NaN	11955	4205	16155
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16168	41.118	NaN	3395.6	30	0	461.7	0.214	+			3722	ATAAVIFLH	9	53	471.7734209520533	941.5322889709066	2	471.7738037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATAAVIFLH_	ENSG00000120992|ENST00000316963|LYPLA1;ENST00000517297.5_1_8:54967680-55014407:-|nuORF;ENST00000519926.5_1_8:54966225-55014407:-|nuORF;ENST00000521856.1_1_8:55013466-55014395:-|nuORF;nc|ENSG00000120992|O75608-2|LYPLA1	114.5858319719848	0.024477364776774663	4				NaN	NaN	0	NaN	11958	4208	16167
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16169	41.121	NaN	3525.6	30	0	649.8	0.106			+	44494	TSSGVAPSRPG	11	69	508.26335405843685	1014.5121551836737	2	508.263916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TSSGVAPSRPG_	REV__ENST00000355703.3_1_11:65383672-65384310:+|nuORF	42.242577148874844	0.5272577467055767	4				NaN	NaN	0	NaN	11959	4208	16167
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16170	41.123	NaN	3538.6	30	0	431.43	0.035	+			4863	ATPQALAYAE	10	71	517.7604939008688	1033.5064348685376	2	517.761962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATPQALAYAE_	SLC26A11|p.I63T|1|0.11|ENSG00000181045|chr17:80221748-80221748|T/C|missense_variant	58.22992032128504	0.38193887838457763	4				NaN	NaN	0	NaN	11960	4208	16167
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16178	41.143	NaN	2583.6	30	0	235.17	0.214				-1	 	0	57	347.1982704583101	692.3819879834202	2	347.19866943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11965	4211	16177
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16179	41.147	NaN	5583.2	30	0	543.17	0.106	+			5284	ATVIFIVTK	9	68	496.31235349023774	990.6101540472755	2	496.31298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATVIFIVTK_	ENSG00000171234|ENST00000305231|UGT2B7	68.84614121027924	0.14577793175421136	4				NaN	NaN	0	NaN	11966	4211	16177
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16180	41.149	NaN	2677.5	30	0	285.69	0.106			+	32661	RAAPTRGARF	10	70	551.8158407488024	1101.6171285644048	2	551.8167724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RAAPTRGARF_	REV__ENST00000488132.5_1_3:98437297-98451483:-|nuORF	45.97224482568171	0.49411383603842696	4				NaN	NaN	0	NaN	11967	4211	16177
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16181	41.15	NaN	2606.4	30	0	394.83	0.106	+			19030	IYADNQVMHF	10	74	619.2862179742791	1236.5578830153581	2	619.286865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IYADNQVMHF_	ENSG00000177084|ENST00000320574|POLE;ENST00000537064.5_1_12:133201285-133234573:-|nuORF;POLE|p.A2030Pfs*18|1|0.14|ENSG00000177084|chr12:132632712-132632712|C/-|frameshift_variant	82.24051045832904	0.17731618517892733	4				NaN	NaN	0	NaN	11968	4211	16177
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16182	41.152	NaN	1858	30	0	181.19	0.106	+			41760	SVSNLVTVF	9	56	483.2681730533023	964.5217931734046	2	483.2680969238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVSNLVTVF_	ENSG00000146192|ENST00000274963|FGD2;ENST00000459781.5_1_6:36973566-36979631:+|nuORF;ENST00000464083.5_1_6:36973566-36981682:+|nuORF;ENST00000487975.5_1_6:36973566-36978850:+|nuORF;FGD2|p.K560Qfs*14|1|0.4|ENSG00000146192|chr6:37027495-37027496|-/G|frameshift_variant	59.93077597824379	0.21419174904018318	4				NaN	NaN	0	NaN	11969	4211	16177
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16183	41.154	NaN	4531.6	30	0	364.17	0.036			+	8588	ECAPLDVALQ	10	78	529.7645610663751	1057.5145691995501	2	530.2650756835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ECAPLDVALQ_	REV__ENSG00000196581|ENST00000378191|AJAP1	42.86426827375447	0.522752283233888	4				NaN	NaN	0	NaN	11970	4211	16177
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16184	41.155	NaN	1963.7	30	0	237.4	0.139				-1	 	0	54	433.75210568107997	865.48965842896	2	433.75286865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11971	4211	16177
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16194	41.178	NaN	6253.7	30	0	942.15	0.214				-1	 	0	64	499.2707695437473	996.5269861542946	2	499.2710876464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11978	4214	16193
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16195	41.182	NaN	3121.3	30	0	352.69	0.106	+			35906	SEFKSVLL	8	57	461.7652434702248	921.5159340072496	2	461.76556396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEFKSVLL_	ENSG00000109501|ENST00000226760|WFS1;ENST00000507765.1_1_4:6290695-6304192:+|nuORF	71.29570347882199	0.39610197767395533	4				NaN	NaN	0	NaN	11979	4214	16193
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16196	41.184	NaN	4498.9	30	0	536.57	0.106			+	30734	QDLFCLLAR	9	68	539.7880520446565	1077.561551156113	2	540.2898559570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QDLFCLLAR_	REV__ENSG00000039523|ENST00000042381|RIPOR1;REV__ENST00000569733.6_1_16:67575293-67580037:+|nuORF;REV__nc|ENSG00000039523|Q6ZS17-3|RIPOR1;REV__nc|ENSG00000039523|Q6ZS17-4|RIPOR1;REV__nc|ENSG00000039523|Q6ZS17|RIPOR1	51.19269402634007	0.2889735674168909	4				NaN	NaN	0	NaN	11980	4214	16193
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16197	41.186	NaN	2474	30	0	191.22	0.106	+			23906	LDKVIEIV	8	61	464.7890823841677	NaN	0	464.7890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LDKVIEIV_	CTNNAL1|p.C505Vfs*15|1|0.24|ENSG00000119326|chr9:108965456-108965456|A/-|frameshift_variant;ENSG00000119326|ENST00000325551|CTNNAL1;nc|ENSG00000119326|Q9UBT7-2|CTNNAL1;nc|ENSG00000119326|Q9UBT7-3|CTNNAL1	55.50420428727701	1.7418937515398478	4				NaN	NaN	0	NaN	11981	4214	16193
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16198	41.187	NaN	1371.2	30	0	150	0.106	+			26997	LYPGTTGLK	9	52	475.2701721191406	NaN	0	475.2701721191406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LYPGTTGLK_	ENST00000537247.5_1_12:100988676-101004866:+|nuORF	47.657333605630114	0.2228375344433429	4				NaN	NaN	0	NaN	11982	4214	16193
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16199	41.189	NaN	1946.6	30	0	276.08	0.038	+			43100	TEQEITRLKA	10	67	594.8333909957444	NaN	0	594.8339233398438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TEQEITRLKA_	ENSG00000167880|ENST00000301607|EVPL	41.42661286455405	0.3598046802465243	4				NaN	NaN	0	NaN	11983	4214	16193
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16200	41.19	NaN	1898.8	30	0	321.24	0.141			+	-1	IEPMDGMK	8	54	468.7137964206058	NaN	0	468.7131042480469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_IEPM(Oxidation (M))DGMK_	REV__ENSG00000153560|ENST00000283629|UBP1;REV__ENST00000481761.1_1_3:33454312-33458306:-|nuORF;REV__nc|ENSG00000153560|Q9NZI7-4|UBP1	38.80614096846853	1.7418937515398478	4				NaN	NaN	0	NaN	11984	4214	16193
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16207	41.208	NaN	5712.6	30	0	351.15	0.214	+			15478	GVAFIFNQK	9	72	512.2844196336413	1022.5542863340826	2	512.2845458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVAFIFNQK_	ENSG00000133816|ENST00000683283|MICAL2;ENSG00000243156|ENST00000441493|MICAL3;ENST00000530691.5_1_11:12229562-12281716:+|nuORF;MICAL2|p.E821Kfs*48|1|0.07|ENSG00000133816|chr11:12242336-12242337|AG/-|frameshift_variant;MICAL3|p.A1313Lfs*17|1|0.24|ENSG00000243156|chr22:17818727-17818727|G/-|frameshift_variant;MICAL3|p.R1499Gfs*106|7|0.44|ENSG00000243156|chr22:17818166-17818166|G/-|frameshift_variant;MICAL3|p.R1706Afs*24|1|0.3|ENSG00000243156|chr22:17817545-17817545|G/-|frameshift_variant;nc|ENSG00000133816|O94851-2|MICAL2;nc|ENSG00000133816|O94851-3|MICAL2;nc|ENSG00000133816|O94851-4|MICAL2;nc|ENSG00000133816|O94851-5|MICAL2;nc|ENSG00000133816|O94851-6|MICAL2;nc|ENSG00000133816|O94851|MICAL2;nc|ENSG00000243156|Q7RTP6-2|MICAL3;nc|ENSG00000243156|Q7RTP6-3|MICAL3;nc|ENSG00000243156|Q7RTP6-4|MICAL3;nc|ENSG00000243156|Q7RTP6-5|MICAL3	65.80317337860623	0.1652391959156183	4				NaN	NaN	0	NaN	11988	4217	16206
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16208	41.212	NaN	2912.2	30	0	285.16	0.106				-1	QRCACLLAL	9	59	524.2764396306729	1046.5383263281458	2	524.2769165039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_QRC(Carbamidomethyl (C))ACLLAL_	ENSG00000280094|ENST00000623530|OR1B1;OR1B1|p.V314Gfs*3|1|0.41|ENSG00000280094|chr9:122628595-122628595|A/-|frameshift_variant	47.91560031466742	0.327412564698279	4				NaN	NaN	0	NaN	11989	4217	16206
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16209	41.213	NaN	5144.1	30	0	756.62	0.106				-1	 	0	64	516.7347055657964	1031.4548581983927	2	516.7357788085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11990	4217	16206
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16210	41.215	NaN	1545.1	30	0	410.82	0.035			+	33587	RLLPRGSHA	9	55	503.7984669568518	1005.5823809805037	2	504.2972717285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RLLPRGSHA_	REV__ENST00000520820.1_1_8:103251674-103256308:+|nuORF	20.94693142431847	0.6074874384046576	4				NaN	NaN	0	NaN	11991	4217	16206
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16215	41.229	NaN	2193.7	30	0	169.56	0.144	+			22477	KTNAGPRDLC	10	66	537.7694091796875	NaN	0	537.7694091796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTNAGPRDLC_	ENST00000482672.1_1_1:161123787-161126762:+|nuORF	42.86426827375447	0.3507156137006061	4				NaN	NaN	0	NaN	11993	4220	16214
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16219	41.246	NaN	3918.3	30	0	286.02	0.214				-1	 	0	74	592.3208554373307	1182.6271579414613	2	592.3214111328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11994	4223	16218
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16220	41.249	NaN	3111.9	30	0	200.18	0.106	+			36166	SELEKTFNL	9	70	540.782448353289	1079.550343773378	2	540.7832641601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SELEKTFNL_	ENSG00000067066|ENST00000340126|SP100;ENSG00000185404|ENST00000415673|SP140L;nc|ENSG00000067066|P23497-2|SP100;nc|ENSG00000067066|P23497-3|SP100;nc|ENSG00000067066|P23497-5|SP100;nc|ENSG00000067066|P23497-6|SP100;nc|ENSG00000067066|P23497-7|SP100;nc|ENSG00000067066|P23497|SP100;nc|ENSG00000185404|Q9H930-1|SP140L;nc|ENSG00000185404|Q9H930-2|SP140L;nc|ENSG00000185404|Q9H930-3|SP140L;SP140L|p.F492Lfs*17|1|0.46|ENSG00000185404|chr2:230401414-230401414|T/-|frameshift_variant	68.84614121027924	0.14577793175421136	4				NaN	NaN	0	NaN	11995	4223	16218
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16221	41.251	NaN	3116.4	30	0	668.19	0.106			+	51609	YYTFTGKKP	9	68	552.7894802935995	1103.5644076539988	2	553.290771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YYTFTGKKP_	REV__nc|ENSG00000198826|Q6P4F7-2|ARHGAP11A	47.657333605630114	0.33044192980041115	4				NaN	NaN	0	NaN	11996	4223	16218
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16222	41.253	NaN	2895.9	30	0	233.45	0.106	+			1871	AILLPQPLK	9	68	496.82921407671216	NaN	0	496.8284606933594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AILLPQPLK_	AluSz_dup37824|chr7:44800399-44800695:-|1.3496941177838604|0.0026438264880892|9.0|476.0|13|2|anti-sense;ENST00000467643.5_1_3:122474254-122512599:-|nuORF;nc|ENSG00000169087|Q96EW2-2|HSPBAP1	55.50420428727701	0.16876052142120426	4				NaN	NaN	0	NaN	11997	4223	16218
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16223	41.255	NaN	1418.4	30	0	173.11	0.035	+			43884	TMVKGLYGI	9	50	491.2747211755028	980.5348894178056	2	491.2746276855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TMVKGLYGI_	ENSG00000166796|ENST00000541669|LDHC	33.51558372728122	0.4900267029546261	4				NaN	NaN	0	NaN	11998	4223	16218
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16230	41.271	NaN	4812.2	30	0	573.72	0.215	+			48699	VTTISAGLIY	10	67	519.2972694965839	1036.5799860599677	2	519.2969970703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTTISAGLIY_	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42|TTN;TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant	56.72105179125745	0.3956618550748046	4				NaN	NaN	0	NaN	12002	4226	16229
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16231	41.275	NaN	1406.1	30	0	134.4	0.036			+	20648	KGIVGNSRSSS	11	63	546.2918701171875	NaN	0	546.2918701171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KGIVGNSRSSS_	REV__DMRTA1|p.E381Vfs*25|1|0.05|ENSG00000176399|chr9:22451537-22451538|-/TCTTGATATCCTTACTAAGATTTTCCCAAATTAC|frameshift_variant;REV__ENSG00000176399|ENST00000325870|DMRTA1	33.921630207806714	0.41424167740351664	4				NaN	NaN	0	NaN	12003	4226	16229
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16237	41.289	NaN	1362.5	30	0	169.6	0.142	+			6775	CFAYQVAK	8	50	465.23268878527443	NaN	0	465.23297119140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CFAYQVAK_	ENSG00000122025|ENST00000241453|FLT3;ENST00000380987.2_1_13:28578191-28599431:-|nuORF;nc|ENSG00000122025|P36888-2|FLT3	28.2542754592877	1.7418937515398478	4				NaN	NaN	0	NaN	12006	4229	16236
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16241	41.305	NaN	4645.9	30	0	353.97	0.215	+			50686	YEELVRMV	8	67	519.7671167979688	1037.5196806627375	2	519.7685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YEELVRMV_	nc|ENSG00000092841|P60660-2|MYL6	74.25504064058377	0.37144338840759816	4				NaN	NaN	0	NaN	12007	4232	16240
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16242	41.309	NaN	2893.9	30	0	832.14	0.106			+	25758	LSAFCLAALV	10	63	532.7939436682407	1063.5733344032813	2	532.7957153320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LSAFC(Carbamidomethyl (C))LAALV_	REV__ENSG00000180694|ENST00000458549|TMEM64;REV__nc|ENSG00000180694|Q6YI46-4|TMEM64;REV__TMEM64|p.A138T|1|0.13|ENSG00000180694|chr8:90645494-90645494|C/T|missense_variant;REV__TMEM64|p.A138V|1|0.08|ENSG00000180694|chr8:90645493-90645493|G/A|missense_variant;REV__TMEM64|p.C315Lfs*30|1|0.59|ENSG00000180694|chr8:90631559-90631560|-/A|frameshift_variant;REV__TMEM64|p.F257Lfs*19|1|0.37|ENSG00000180694|chr8:90645135-90645135|A/-|frameshift_variant	65.80317337860623	0.313061058278602	4				NaN	NaN	0	NaN	12008	4232	16240
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16243	41.311	NaN	1379.1	30	0	101.78	0.106	+			15615	GVKIGVKAD	9	54	443.7712532449895	NaN	0	443.7712097167969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GVKIGVKAD_	ENSG00000121653|ENST00000241014|MAPK8IP1	40.77816245573522	0.2702456086868081	4				NaN	NaN	0	NaN	12009	4232	16240
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16244	41.313	NaN	1740.7	30	0	156.85	0.037				-1	KTYGHLYMQ	9	63	578.7756184733431	1155.5366840134861	2	578.7760009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_KTYGHLYM(Oxidation (M))Q_	ENSG00000076716|ENST00000370828|GPC4;GPC4|p.K345Sfs*49|2|0.35|ENSG00000076716|chrX:133305895-133305895|G/-|frameshift_variant;nc|ENSG00000076716|O75487-2|GPC4	20.94693142431847	0.6074874384046576	4				NaN	NaN	0	NaN	12010	4232	16240
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16248	41.327	NaN	5653.5	30	0	374.72	0.214	+			36027	SEILQANQL	9	62	508.2741575721349	1014.5337622110699	2	508.2744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEILQANQL_	ENSG00000036054|ENST00000394144|TBC1D23;ENST00000486274.5_1_3:99980342-100042509:+|nuORF;nc|ENSG00000036054|Q9NUY8-2|TBC1D23;TBC1D23|p.A351Ifs*23|1|0.05|ENSG00000036054|chr3:100299289-100299290|-/ATTCACA|frameshift_variant	136.26810882979174	0.012230845423532208	4				NaN	NaN	0	NaN	12011	4235	16247
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16249	41.33	NaN	1304.7	30	0	104.11	0.106			+	26471	LTKNTLIQ	8	54	465.7832442639357	929.5519355946715	2	466.2829895019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LTKNTLIQ_	REV__ENST00000535939.5_2_12:10746401-10750756:-|nuORF	31.954861631926434	0.7126016770032289	4				NaN	NaN	0	NaN	12012	4235	16247
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16250	41.332	NaN	1628.4	30	0	117.67	0.036	+			41154	SVKEWFNY	8	65	536.7601318359375	NaN	0	536.7601318359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVKEWFNY_	ENSG00000138688|ENST00000679879|BLTP1;nc|ENSG00000138688|Q2LD37-4|BLTP1;nc|ENSG00000138688|Q2LD37|BLTP1	40.77816245573522	1.7418937515398478	4				NaN	NaN	0	NaN	12013	4235	16247
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16256	41.348	NaN	2592.2	30	0	247.76	0.213	+			49808	VYSRYFTTY	9	71	600.2896494306611	1198.5647459281222	2	600.2905883789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	63.53385203322761	0.18415635464017938	4				NaN	NaN	0	NaN	12016	4238	16255
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16257	41.352	NaN	2275.1	30	0	226.39	0.106			+	25808	LSCKSMQSP	9	55	490.7297768215264	979.4450007098528	2	490.7301940917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSCKSMQSP_	REV__ENST00000372042.5_1_X:109964733-110005983:-|nuORF;REV__ENST00000372045.5_1_X:109964733-110005983:-|nuORF;REV__ENST00000482160.5_1_X:109943921-110005983:-|nuORF	72.87924865735499	0.12833875048249987	4				NaN	NaN	0	NaN	12017	4238	16255
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16258	41.354	NaN	1959.8	30	0	197.37	0.106				-1	LVMMVRCM	8	61	499.7370289267469	997.4595049202939	2	499.7378234863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_LVM(Oxidation (M))MVRCM_	ENSG00000114854|ENST00000232975|TNNC1	35.200714571348534	0.6875396545722289	4				NaN	NaN	0	NaN	12018	4238	16255
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16259	41.356	NaN	3097.8	30	0	332.57	0.106	+			7304	DASKLTYIY	9	62	537.2785933262816	1072.542633719363	2	537.2803955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DASKLTYIY_	ENST00000383746.7_2_3:44396236-44396287:+|nuORF	52.936696900407355	0.27249468807391813	4				NaN	NaN	0	NaN	12019	4238	16255
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16260	41.358	NaN	1763.3	30	0	127.59	0.037			+	21736	KQLPMKEMI	9	71	567.3078001935864	1132.6010474539728	2	567.8118286132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_KQLPM(Oxidation (M))KEMI_	REV__ENSG00000151835|ENST00000382292|SACS;REV__nc|ENSG00000151835|Q9NZJ4-2|SACS;REV__SACS|p.A1848Qfs*2|1|0.1|ENSG00000151835|chr13:23338334-23338334|C/-|frameshift_variant;REV__SACS|p.I3485Lfs*10|1|0.24|ENSG00000151835|chr13:23333423-23333423|T/-|frameshift_variant;REV__SACS|p.K2931Nfs*22|1|0.23|ENSG00000151835|chr13:23335083-23335083|T/-|frameshift_variant;REV__SACS|p.L2871Ffs*29|1|0.26|ENSG00000151835|chr13:23335263-23335264|-/A|frameshift_variant;REV__SACS|p.L3102*|1|0.33|ENSG00000151835|chr13:23334571-23334571|A/-|frameshift_variant;REV__SACS|p.P2063Sfs*7|1|0.36|ENSG00000151835|chr13:23337689-23337690|-/A|frameshift_variant;REV__SACS|p.S2058Ffs*2|1|0.3|ENSG00000151835|chr13:23337703-23337704|-/A|frameshift_variant;REV__SACS|p.S2058Lfs*19|1|0.1|ENSG00000151835|chr13:23337704-23337704|A/-|frameshift_variant;REV__SACS|p.S4423Ffs*42|1|0.18|ENSG00000151835|chr13:23330610-23330611|-/G|frameshift_variant	49.44154591367651	0.3095138337212152	4				NaN	NaN	0	NaN	12020	4238	16255
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16266	41.374	NaN	3431.1	30	0	144.91	0.214				-1	 	0	71	369.21149781874055	736.4084427042811	2	369.2118835449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12023	4241	16265
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16267	41.377	NaN	2386.5	30	0	228.92	0.106	+			20213	KELGVGIAL	9	47	450.2815752646307	NaN	0	450.2820129394531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KELGVGIAL_	ENSG00000164687|ENST00000297258|FABP5;ENST00000477993.1_1_7:152139663-152139723:+|nuORF	71.87747018426188	0.0992163553043454	4				NaN	NaN	0	NaN	12024	4241	16265
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16268	41.379	NaN	2589.1	30	0	389.89	0.106	+			27848	MTFPATWTGAK	11	68	605.7991315666457	1209.5837102000912	2	605.8001098632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MTFPATWTGAK_	ENST00000310396.9_1_7:120629626-120629659:+|nuORF	48.18798116849167	0.44590646720473764	4				NaN	NaN	0	NaN	12025	4241	16265
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16269	41.381	NaN	3360.7	30	0	500.17	0.106			+	21365	KMEARREEQ	9	73	588.7935489001316	1175.572544867063	2	588.7958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KMEARREEQ_	REV__ENSG00000183255|ENST00000330938|PTTG1IP	25.57405402267927	0.5642445186134241	4				NaN	NaN	0	NaN	12026	4241	16265
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16270	41.383	NaN	1611.6	30	0	155.75	0.106	+			2452	APKKSKADGQ	10	58	515.2891256142258	1028.5636982952515	2	515.2899780273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_APKKSKADGQ_	ENSG00000172534|ENST00000310441|HCFC1;nc|ENSG00000172534|P51610-2|HCFC1;nc|ENSG00000172534|P51610-4|HCFC1	29.170058357718403	0.6416167986984785	4				NaN	NaN	0	NaN	12027	4241	16265
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16271	41.385	NaN	2085.6	30	0	174.98	0.106	+			17702	IELRVTSL	8	67	465.7832442639357	929.5519355946715	2	465.7840270996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IELRVTSL_	ENSG00000155561|ENST00000285968|NUP205;NUP205|p.F1204Lfs*34|1|0.12|ENSG00000155561|chr7:135617163-135617163|T/-|frameshift_variant;NUP205|p.Q1211Kfs*27|1|0.25|ENSG00000155561|chr7:135617188-135617188|C/-|frameshift_variant	39.252832667884924	0.6609488554722044	4				NaN	NaN	0	NaN	12028	4241	16265
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16272	41.386	NaN	1432.2	30	0	54.818	0.037				-1	MAVKPMALEK	10	61	567.3078001935864	1132.6010474539728	2	567.3078002929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_M(Oxidation (M))AVKPMALEK_	ENST00000296218.7_1_1:38031241-38031424:+|nuORF	37.81151784470057	0.569310847604193	4				NaN	NaN	0	NaN	12029	4241	16265
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16277	41.401	NaN	4473	30	0	565.09	0.214			+	-1	MRQCLQEY	8	68	564.2526539000513	1126.4907548669025	2	564.2532348632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_MRQC(Carbamidomethyl (C))LQEY_	REV__DYNC2H1|p.F2761Lfs*20|1|0.09|ENSG00000187240|chr11:103203742-103203742|T/-|frameshift_variant;REV__DYNC2H1|p.L4021Wfs*5|1|0.3|ENSG00000187240|chr11:103358262-103358262|T/-|frameshift_variant;REV__DYNC2H1|p.P3966Hfs*44|1|0.22|ENSG00000187240|chr11:103321194-103321194|T/-|frameshift_variant;REV__ENSG00000187240|ENST00000375735|DYNC2H1;REV__nc|ENSG00000187240|Q8NCM8-2|DYNC2H1	65.80317337860623	0.44433089765398776	4				NaN	NaN	0	NaN	12031	4244	16276
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16278	41.404	NaN	5237	30	0	850.02	0.106	+			50044	WEISQKTVL	9	76	552.3076353690358	1102.6007178048715	2	552.3085327148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WEISQKTVL_	ENSG00000167325|ENST00000300738|RRM1	49.536043120802724	0.308405419312776	4				NaN	NaN	0	NaN	12032	4244	16276
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16279	41.406	NaN	3335.9	30	0	282.64	0.035	+			25155	LLSTFNHF	8	62	489.75560554931593	977.4966581654319	2	489.755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LLSTFNHF_	ENST00000402907.1_1_6:143664004-143664346:+|nuORF	50.0245360154114	0.5941082100236891	4				NaN	NaN	0	NaN	12033	4244	16276
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16285	41.421	NaN	4248.2	30	0	519.82	0.214				-1	KNAVCPNGR	9	72	508.25740712956366	1014.5002613259273	2	508.2577209472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_KNAVC(Carbamidomethyl (C))PNGR_	ABCA13|p.A4442Pfs*3|1|0.06|ENSG00000179869|chr7:48506365-48506365|G/-|frameshift_variant;ABCA13|p.E1535Lfs*6|1|0.06|ENSG00000179869|chr7:48274267-48274268|-/TTTAGGTTTCTTCTCT|frameshift_variant;ABCA13|p.H2188Ifs*3|1|0.11|ENSG00000179869|chr7:48276226-48276226|C/-|frameshift_variant;ABCA13|p.K1949Rfs*10|1|0.04|ENSG00000179869|chr7:48275509-48275510|-/TCGGG|frameshift_variant;ABCA13|p.K3855Nfs*139|1|0.3|ENSG00000179869|chr7:48389131-48389153|GGCTGTGGTCCAAGACCTCAGCC/-|frameshift_variant;ABCA13|p.L1248Tfs*2|1|0.16|ENSG00000179869|chr7:48273400-48273401|-/A|frameshift_variant;ABCA13|p.N1764Tfs*18|1|0.33|ENSG00000179869|chr7:48274953-48274953|A/-|frameshift_variant;ABCA13|p.P1447Tfs*22|1|0.49|ENSG00000179869|chr7:48273997-48273998|-/A|frameshift_variant;ABCA13|p.S1533Lfs*16|1|0.1|ENSG00000179869|chr7:48274262-48274263|-/CT|frameshift_variant;ENSG00000179869|ENST00000435803|ABCA13;nc|ENSG00000179869|Q86UQ4-4|ABCA13;nc|ENSG00000179869|Q86UQ4|ABCA13	49.44154591367651	0.3095138337212152	4				NaN	NaN	0	NaN	12036	4247	16284
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16286	41.424	NaN	2267.4	30	0	373.99	0.106				-1	 	0	32	336.5337220643007	1006.5793367931021	3	336.5342712402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12037	4247	16284
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16287	41.426	NaN	2471.9	30	0	351.49	0.106	+			44052	TPQTWYQR	8	68	540.2669677734375	NaN	0	540.2669677734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TPQTWYQR_	ENST00000513638.5_1_1:89873259-89875899:+|nuORF	45.9519527083369	1.7418937515398478	4				NaN	NaN	0	NaN	12038	4247	16284
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16288	41.428	NaN	2736	30	0	279.36	0.106	+			2185	ALNAGSYASL	10	59	483.7475335584845	965.4805141837691	2	484.2490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ALNAGSYASL_	CLASP2|p.L1169Ffs*6|1|0.14|ENSG00000163539|chr3:33510729-33510730|-/A|frameshift_variant;CLASP2|p.M744Nfs*4|1|0.19|ENSG00000163539|chr3:33560868-33560869|-/T|frameshift_variant;CLASP2|p.M744Wfs*33|2|0.29|ENSG00000163539|chr3:33560869-33560869|T/-|frameshift_variant;ENSG00000163539|ENST00000682230|CLASP2;nc|ENSG00000163539|O75122-2|CLASP2;nc|ENSG00000163539|O75122-3|CLASP2;nc|ENSG00000163539|O75122|CLASP2	59.93077597824379	0.36646980200755325	4				NaN	NaN	0	NaN	12039	4247	16284
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16289	41.43	NaN	845.06	30	0	80.141	0.106	+			47529	VQQVSLVI	8	46	443.2735900878906	NaN	0	443.2735900878906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VQQVSLVI_	ENSG00000156976|ENST00000323963|EIF4A2;ENSG00000161960|ENST00000293831|EIF4A1;ENST00000421800.1_1_13:29173910-29174120:+|nuORF;ENST00000461021.1_1_3:186505247-186505672:+|nuORF;ENST00000485101.5_1_3:186505555-186505672:+|nuORF;ENST00000492144.5_1_3:186503809-186505672:+|nuORF;ENST00000494445.1_1_3:186505247-186506105:+|nuORF;ENST00000497177.1_1_3:186504924-186505672:+|nuORF;nc|ENSG00000156976|Q14240-2|EIF4A2	45.9519527083369	1.7418937515398478	4				NaN	NaN	0	NaN	12040	4247	16284
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16290	41.432	NaN	1749	30	0	182.59	0.036	+			51038	YLAMNKRGR	9	63	554.8049492750757	1107.5953456169514	2	554.8069458007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YLAMNKRGR_	ENSG00000186895|ENST00000334134|FGF3	50.0245360154114	0.3026755932229825	4				NaN	NaN	0	NaN	12041	4247	16284
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16295	41.446	NaN	5508.2	30	0	549.58	0.214	+			38561	SSFGGLILSK	10	76	504.78946382855435	1007.5643747239087	2	504.79052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSFGGLILSK_	ENSG00000114544|ENST00000360370|SLC41A3;ENST00000506102.5_1_3:125725861-125741959:-|nuORF;ENST00000512557.5_1_3:125725252-125741959:-|nuORF;nc|ENSG00000114544|Q96GZ6-2|SLC41A3;nc|ENSG00000114544|Q96GZ6-3|SLC41A3;nc|ENSG00000114544|Q96GZ6-4|SLC41A3;nc|ENSG00000114544|Q96GZ6-5|SLC41A3;nc|ENSG00000114544|Q96GZ6-6|SLC41A3;nc|ENSG00000114544|Q96GZ6-7|SLC41A3;nc|ENSG00000114544|Q96GZ6-8|SLC41A3;nc|ENSG00000114544|Q96GZ6|SLC41A3	114.85826248499774	0.03459167991829056	4				NaN	NaN	0	NaN	12043	4250	16294
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16296	41.449	NaN	3268	30	0	348.84	0.034				-1	 	0	65	474.28593036109487	946.5573077889898	2	474.2862548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12044	4250	16294
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16302	41.466	NaN	2773.9	30	0	922.04	0.214	+			7738	DLYAYSTNVI	10	59	579.7881436973155	1157.561734461431	2	580.2914428710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DLYAYSTNVI_	tr|U7SPC3|U7SPC3_FUSNUAminotransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01811PE=3SV=1	47.657333605630114	0.47858658696240314	4				NaN	NaN	0	NaN	12047	4253	16301
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16303	41.469	NaN	1986.8	30	0	273.89	0.106			+	25940	LSHLSKFF	8	59	489.7751118384953	977.5356707437907	2	490.27691650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSHLSKFF_	REV__ENST00000446801.6_1_15:66813463-66816015:+|nuORF	47.91560031466742	0.6071945918984287	4				NaN	NaN	0	NaN	12048	4253	16301
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16304	41.471	NaN	1407.7	30	0	152.49	0.106	+			44144	TQGQKSALQ	9	57	480.76077143375863	NaN	0	480.7602233886719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TQGQKSALQ_	ENSG00000140987|ENST00000396852|ZSCAN32;ENST00000304926.7_1_16:3440119-3447566:-|nuORF	42.86426827375447	0.2558691296974908	4				NaN	NaN	0	NaN	12049	4253	16301
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16305	41.473	NaN	1705.3	30	0	217.08	0.106	+			29174	NVIRDAVTY	9	62	525.7829179903645	NaN	0	525.7820434570312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NVIRDAVTY_	ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2	41.42661286455405	0.26577678759562784	4				NaN	NaN	0	NaN	12050	4253	16301
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16306	41.475	NaN	1572.4	30	0	159.1	0.038				-1	EASLWSSGFGM	11	70	594.2578771619983	NaN	0	594.2584228515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_EASLWSSGFGM(Oxidation (M))_	ENSG00000186281|ENST00000434632|GPAT2;ENST00000468438.1_1_2:96696661-96698107:-|nuORF;ENST00000484440.5_1_2:96688852-96698107:-|nuORF;ENST00000486463.5_1_2:96693672-96700654:-|nuORF;nc|ENSG00000186281|Q6NUI2-3|GPAT2;nc|ENSG00000186281|Q6NUI2|GPAT2	54.776311868738084	0.2810134756352116	4				NaN	NaN	0	NaN	12051	4253	16301
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16313	41.493	NaN	2610.6	30	0	237.35	0.214				-1	 	0	52	347.1982704583101	692.3819879834202	2	347.1986999511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12055	4256	16312
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16314	41.496	NaN	4980.3	30	0	435.93	0.106	+			28169	NANRIALDF	9	70	517.274338863418	1032.534124793636	2	517.2747192382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NANRIALDF_	ENSG00000131981|ENST00000254301|LGALS3;ENST00000556438.6_1_14:55604729-55611986:+|nuORF	98.62937762414208	0.04060045538121712	4				NaN	NaN	0	NaN	12056	4256	16312
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16315	41.498	NaN	4568.2	30	0	813.15	0.106			+	43740	TLARESLVL	9	58	501.30185787545383	1000.5891628177077	2	501.302978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TLARESLVL_	REV__ENSG00000170776|ENST00000394518|AKAP13;REV__nc|ENSG00000170776|Q12802-2|AKAP13;REV__nc|ENSG00000170776|Q12802-4|AKAP13	40.77816245573522	0.41113185337114944	4				NaN	NaN	0	NaN	12057	4256	16312
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16316	41.5	NaN	10913	30	0	4569.6	0.106	+			8766	EEIAFLKKL	9	83	545.8280340371468	1089.6415151410936	2	545.8295288085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EEIAFLKKL_	ENSG00000026025|ENST00000544301|VIM;ENST00000421459.2_2_10:17272631-17276850:+|nuORF	124.59426212874841	0.018418509520798258	4				NaN	NaN	0	NaN	12058	4256	16312
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16317	41.502	NaN	5732	30	0	441.99	0.106	+			44533	TSWRDGMAF	9	67	535.7394217728917	1069.4642906125832	2	535.7402954101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TSWRDGMAF_	ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1;SPTBN1|p.K503Rfs*24|1|0.06|ENSG00000115306|chr2:54626095-54626095|G/-|frameshift_variant	58.22992032128504	0.22837015374068087	4				NaN	NaN	0	NaN	12059	4256	16312
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16318	41.504	NaN	1817.5	30	0	103.61	0.037				-1	FYGDKMNLF	9	56	575.7649228464164	1149.5152927596328	2	575.7659301757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_FYGDKM(Oxidation (M))NLF_	ENSG00000119408|ENST00000320246|NEK6;nc|ENSG00000119408|Q9HC98-2|NEK6;nc|ENSG00000119408|Q9HC98-3|NEK6;nc|ENSG00000119408|Q9HC98-4|NEK6	34.172542307311794	0.4838870758800184	4				NaN	NaN	0	NaN	12060	4256	16312
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16324	41.52	NaN	8411.2	30	0	1745	0.214				-1	 	0	64	425.73655152812836	849.4585501230567	2	425.73699951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12063	4259	16323
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16325	41.523	NaN	5111.3	30	0	406.21	0.106	+			12702	GEKNVFEAL	9	68	503.76337947896184	1005.5122060247237	2	503.76373291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEKNVFEAL_	CYP51A1|p.L333Wfs*13|1|0.15|ENSG00000001630|chr7:92123208-92123208|A/-|frameshift_variant;ENSG00000001630|ENST00000003100|CYP51A1;nc|ENSG00000001630|Q16850-2|CYP51A1	76.16968421966216	0.11411088698345859	4				NaN	NaN	0	NaN	12064	4259	16323
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16326	41.525	NaN	4859.5	30	0	521.75	0.106				-1	 	0	63	472.29419764873154	942.5738423642631	2	472.2944641113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12065	4259	16323
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16327	41.527	NaN	5053.7	30	0	509.91	0.106			+	6831	CIALLWLK	8	68	508.8025569617804	1015.5905609903608	2	508.8028564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_C(Carbamidomethyl (C))IALLWLK_	REV__ENSG00000139865|ENST00000553443|TTC6	69.09296820870183	0.4144562040832486	4				NaN	NaN	0	NaN	12066	4259	16323
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16328	41.529	NaN	3019.7	30	0	325.87	0.106			+	47843	VSLDLAQI	8	59	429.74957966375916	857.4846063943183	2	429.7497863769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSLDLAQI_	REV__ENSG00000105701|ENST00000608443|FKBP8;REV__FKBP8|p.Q182Kfs*17|1|0.36|ENSG00000105701|chr19:18539378-18539378|G/-|frameshift_variant;REV__nc|ENSG00000105701|Q14318|FKBP8	87.75429964447693	0.2842685068779738	4				NaN	NaN	0	NaN	12067	4259	16323
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16329	41.531	NaN	1351.4	30	0	190.27	0.106				-1	 	0	42	364.7549143899133	727.4952758466267	2	364.7551574707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12068	4259	16323
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16330	41.532	NaN	1579.9	30	0	125.94	0.035	+			25967	LSIPSEARL	9	63	493.286823843214	984.559094753228	2	493.287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSIPSEARL_	ENST00000371145.7_1_X:123095638-123155247:+|nuORF;ENST00000371160.5_1_X:123095165-123156432:+|nuORF;ENST00000458176.5_1_X:123095593-123156435:+|nuORF;ENST00000466748.5_1_X:123095638-123189980:+|nuORF	70.8162118820467	0.13725933411854815	4				NaN	NaN	0	NaN	12069	4259	16323
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16335	41.547	NaN	5057.8	30	0	510.83	0.214	+			43974	TPFKGGTLF	9	72	484.26572159635765	966.5168902595153	2	484.26580810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TPFKGGTLF_	nc|ENSG00000120802|P42166|TMPO	67.49366992349736	0.1516260258713357	4				NaN	NaN	0	NaN	12071	4262	16334
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16336	41.55	NaN	3537.6	30	0	1479.4	0.106				-1	 	0	62	512.2675759337347	1022.5205989342695	2	512.267822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12072	4262	16334
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16337	41.552	NaN	2361.1	30	0	282.95	0.106			+	41715	SVSEPLAHI	9	58	476.75809169599347	951.501630458787	2	476.7584228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVSEPLAHI_	REV__ENSG00000059758|ENST00000261211|CDK17;REV__nc|ENSG00000059758|Q00537-2|CDK17	55.50420428727701	0.2510918378945873	4				NaN	NaN	0	NaN	12073	4262	16334
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16338	41.554	NaN	4170.8	30	0	219.56	0.106	+			49651	VYINEVRVI	9	69	552.8239221017458	1103.6332912702915	2	552.8240356445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VYINEVRVI_	ENSG00000164944|ENST00000297591|VIRMA;nc|ENSG00000164944|Q69YN4-2|VIRMA;nc|ENSG00000164944|Q69YN4-3|VIRMA;nc|ENSG00000164944|Q69YN4-4|VIRMA	63.53385203322761	0.18415635464017938	4				NaN	NaN	0	NaN	12074	4262	16334
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16339	41.556	NaN	1609.1	30	0	157.6	0.106			+	29751	PHRPLGLL	8	53	451.780747415454	901.546941897708	2	451.7814025878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PHRPLGLL_	REV__PHF23|p.D230Ifs*37|1|0.2|ENSG00000040633|chr17:7236239-7236239|C/-|frameshift_variant	35.200714571348534	0.6875396545722289	4				NaN	NaN	0	NaN	12075	4262	16334
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16340	41.558	NaN	1594.4	30	0	222.7	0.106	+			19052	IYGSSHSW	8	53	468.7135554941455	935.412558055091	2	468.7137145996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IYGSSHSW_	DUOX1|p.S186N|1|0.29|ENSG00000137857|chr15:45135535-45135535|G/A|missense_variant;ENSG00000137857|ENST00000389037|DUOX1;ENSG00000140279|ENST00000389039|DUOX2;nc|ENSG00000140279|Q9NRD8|DUOX2	39.021493756699265	0.6623843612266921	4				NaN	NaN	0	NaN	12076	4262	16334
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16341	41.559	NaN	1421	30	0	237.44	0.035			+	13382	GLCHFSIVD	9	59	495.7391986336551	NaN	0	495.7393493652344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GLCHFSIVD_	REV__nc|ENSG00000134333|P00338-2|LDHA	31.954861631926434	0.3162336699109506	4				NaN	NaN	0	NaN	12077	4262	16334
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16346	41.574	NaN	3804.7	30	0	467.25	0.214	+			49592	VYGFVREAL	9	65	527.2895349359018	1052.5645169386034	2	527.7919311523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYGFVREAL_	ENSG00000167671|ENST00000301281|UBXN6;ENST00000588238.1_1_19:4446018-4446171:-|nuORF;nc|ENSG00000167671|Q9BZV1-2|UBXN6	87.69643885390035	0.07135982304947239	4				NaN	NaN	0	NaN	12079	4265	16345
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16347	41.577	NaN	3456	30	0	694.65	0.106			+	44664	TTGLIKNFI	9	63	503.7984669568518	1005.5823809805037	2	503.8005676269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTGLIKNFI_	REV__ENSG00000073598|ENST00000158009|FNDC8	44.377184641726394	0.36891676396732553	4				NaN	NaN	0	NaN	12080	4265	16345
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16348	41.579	NaN	3946.4	30	0	390.69	0.106				-1	 	0	72	508.31032187204954	1014.6060908108991	2	508.3106689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12081	4265	16345
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16349	41.581	NaN	1579.9	30	0	153.69	0.106	+			1145	AEMIGSKIF	9	59	498.26464706207884	994.5147411909577	2	498.2648620605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEMIGSKIF_	ENSG00000275395|ENST00000616721|FCGBP;FCGBP-ACSS2|1|fusion;FCGBP|p.G150Afs*25|1|0.19|ENSG00000275395|chr19:39927915-39927915|G/-|frameshift_variant;nc|ENSG00000275395|Q9Y6R7|FCGBP	67.49366992349736	0.1516260258713357	4				NaN	NaN	0	NaN	12082	4265	16345
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16350	41.583	NaN	2537	30	0	367.38	0.106				-1	 	0	73	516.7347055657964	1031.4548581983927	2	516.7362670898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12083	4265	16345
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16351	41.585	NaN	2716.1	30	0	265.03	0.036	+			42772	TEAEIAHIAL	10	64	534.289741570497	1066.5649302077939	2	534.7931518554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TEAEIAHIAL_	ENSG00000137312|ENST00000376389|FLOT1	76.7741389293348	0.22197596950688292	4				NaN	NaN	0	NaN	12084	4265	16345
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16357	41.601	NaN	1115.4	30	0	109.31	0.143			+	9860	EQAVSPIIQ	9	58	492.76987412842686	NaN	0	492.7687072753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EQAVSPIIQ_	REV__ENST00000494484.1_1_7:44841030-44841111:+|nuORF	34.172542307311794	0.30503706118289736	4				NaN	NaN	0	NaN	12087	4268	16356
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16362	41.617	NaN	7146.4	30	0	581.38	0.214				-1	IYQGSTIMY	9	70	546.2594463533367	1090.5043397734732	2	546.2586669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_IYQGSTIM(Oxidation (M))Y_	ENSG00000054793|ENST00000338821|ATP9A;nc|ENSG00000054793|O75110-2|ATP9A	68.78682469695295	0.14603441672067394	4				NaN	NaN	0	NaN	12089	4271	16361
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16363	41.621	NaN	3561.5	30	0	473.61	0.106	+			29255	NYAQVFNKL	9	65	548.7919340546622	1095.5693151761243	2	548.79248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NYAQVFNKL_	ENSG00000136261|ENST00000258761|BZW2;ENST00000480517.5_1_7:16705068-16725727:+|nuORF;nc|ENSG00000136261|Q9Y6E2-2|BZW2	76.7741389293348	0.11149722112137898	4				NaN	NaN	0	NaN	12090	4271	16361
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16364	41.623	NaN	2112.2	30	0	306.96	0.106	+			4600	ATLIGLSIK	9	62	458.296401674283	914.578250415366	2	458.2962951660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATLIGLSIK_	ENSG00000166595|ENST00000422424|CIAO2B;ENST00000562362.5_1_16:66966108-66968009:-|nuORF;ENST00000569299.1_1_16:66967504-66968009:-|nuORF	42.86426827375447	0.38666266728046506	4				NaN	NaN	0	NaN	12091	4271	16361
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16365	41.625	NaN	1934.9	30	0	189.61	0.106	+			47502	VQKIGPEGLV	10	60	520.3102919660784	NaN	0	520.3103637695312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VQKIGPEGLV_	ENSG00000143627|ENST00000342741|PKLR;nc|ENSG00000143627|P30613-2|PKLR;PKLR|p.D339Tfs*2|1|0.39|ENSG00000143627|chr1:155294336-155294336|C/-|frameshift_variant;PKLR|p.V280Wfs*41|1|0.25|ENSG00000143627|chr1:155294609-155294609|C/-|frameshift_variant	24.519189625965996	0.41966695327750003	4				NaN	NaN	0	NaN	12092	4271	16361
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16366	41.626	NaN	1158.6	30	0	132.22	0.033			+	26324	LSVVTGYK	8	44	433.7511443020875	865.487735670975	2	433.7517395019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSVVTGYK_	REV__ENSG00000083838|ENST00000594369|ZNF446;REV__ENST00000391694.4_1_19:58988585-58991546:+|nuORF;REV__nc|ENSG00000083838|Q9NWS9-2|ZNF446	29.14955571784316	0.7342621283720113	4				NaN	NaN	0	NaN	12093	4271	16361
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16370	41.64	NaN	2766.7	30	0	1383.2	0.214				-1	 	0	50	483.2499332586432	964.4853135840864	2	483.2501220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12094	4274	16369
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16371	41.644	NaN	3231	30	0	518.57	0.106			+	10829	FARRPLEL	8	63	501.29769892770446	NaN	0	501.2978820800781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FARRPLEL_	REV__ENSG00000112787|ENST00000680143|FBRSL1;REV__nc|ENSG00000112787|Q9HCM7|FBRSL1	45.9519527083369	1.7418937515398478	4				NaN	NaN	0	NaN	12095	4274	16369
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16372	41.646	NaN	1364.2	30	0	131.07	0.106			+	38098	SPVETLAATR	10	60	522.7892306768564	1043.5639084205127	2	522.7894897460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SPVETLAATR_	REV__ENSG00000179023|ENST00000400664|KLHDC7A;REV__KLHDC7A|p.R608Afs*130|1|0.13|ENSG00000179023|chr1:18482799-18482799|C/-|frameshift_variant	31.529811441608018	0.6223461015008678	4				NaN	NaN	0	NaN	12096	4274	16369
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16373	41.648	NaN	1651.8	30	0	170.61	0.106			+	7978	DSTWLESIY	9	62	557.2579844913697	1112.5014160495393	2	557.258056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DSTWLESIY_	REV__ENSG00000174125|ENST00000308979|TLR1;REV__TLR1|p.K70Nfs*2|1|0.37|ENSG00000174125|chr4:38798622-38798622|T/-|frameshift_variant	38.80614096846853	0.43426287593479557	4				NaN	NaN	0	NaN	12097	4274	16369
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16374	41.649	NaN	960.34	30	0	59.029	0.106	+			36205	SELLVVKM	8	49	459.77034507420456	917.5261372152091	2	459.7694396972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SELLVVKM_	ENSG00000124006|ENST00000404537|OBSL1;ENST00000465149.1_1_2:220420747-220435459:-|nuORF;nc|ENSG00000124006|O75147-1|OBSL1;nc|ENSG00000124006|O75147-2|OBSL1;nc|ENSG00000124006|O75147-4|OBSL1;OBSL1-MRPL2|1|fusion	58.78195531508484	0.5138399468736706	4				NaN	NaN	0	NaN	12098	4274	16369
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16375	41.651	NaN	1548	30	0	161.54	0.037	+			6789	CFNWRDGAR	9	66	562.7574370940514	NaN	0	562.7567749023438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_CFNWRDGAR_	tr|U7T0W9|U7T0W9_FUSNUB3/B4tRNA-bindingdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00708PE=4SV=1	35.61828744233558	0.29773779453147337	4				NaN	NaN	0	NaN	12099	4274	16369
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16380	41.666	NaN	2414.5	30	0	339.9	0.214				-1	 	0	55	462.31740378617695	922.6202546391539	2	462.3175964355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12101	4277	16379
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16381	41.669	NaN	2324.8	30	0	442.44	0.106	+			24252	LETLLRNI	8	60	486.2973423082358	970.5801316832716	2	486.2978820800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LETLLRNI_	ENSG00000112208|ENST00000370693|BAG2;nc|ENSG00000112208|O95816-2|BAG2	51.33545320467046	0.5859736979383976	4				NaN	NaN	0	NaN	12102	4277	16379
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16382	41.671	NaN	3618.7	30	0	572.17	0.106	+			10296	ETPKLHVPS	9	70	504.27903964950735	1006.5435263658147	2	504.27984619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ETPKLHVPS_	ENSG00000188687|ENST00000394019|SLC4A5;ENST00000451608.2_1_2:74452054-74542150:-|nuORF;ENST00000483195.5_1_2:74452054-74512997:-|nuORF;nc|ENSG00000188687|Q9BY07-2|SLC4A5;nc|ENSG00000188687|Q9BY07-4|SLC4A5;nc|ENSG00000188687|Q9BY07-5|SLC4A5;nc|ENSG00000188687|Q9BY07-8|SLC4A5;nc|ENSG00000188687|Q9BY07|SLC4A5;SLC4A5|p.S1062Pfs*46|1|0.26|ENSG00000188687|chr2:74224950-74224950|A/-|frameshift_variant	45.9519527083369	0.35044536499095585	4				NaN	NaN	0	NaN	12103	4277	16379
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16383	41.673	NaN	3549.9	30	0	327.94	0.106	+			15342	GTVLFEIAK	9	64	489.2864131699412	976.5582734066825	2	489.286376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTVLFEIAK_	ENSG00000175970|ENST00000344651|UNC119B	104.0567914643314	0.03506238181059741	4				NaN	NaN	0	NaN	12104	4277	16379
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16384	41.675	NaN	1775	30	0	105.03	0.106	+			10549	EYAKIFTTY	9	67	568.2853489945365	1134.556145055873	2	568.2861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EYAKIFTTY_	ENSG00000087253|ENST00000262134|LPCAT2;ENST00000562299.1_1_16:55612978-55617007:+|nuORF;nc|ENSG00000087253|Q7L5N7-2|LPCAT2	42.396135135203025	0.392153681582562	4				NaN	NaN	0	NaN	12105	4277	16379
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16385	41.677	NaN	1865.9	30	0	328.65	0.106				-1	 	0	49	443.7709330747352	885.5273132162704	2	443.77117919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12106	4277	16379
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16386	41.678	NaN	2028.1	30	0	143.35	0.037	+			29302	NYLNRIVIY	9	72	584.3289944715084	1166.6434360098167	2	584.3294067382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NYLNRIVIY_	tr|U7SUE8|U7SUE8_FUSNUPD-(D/E)XKendonuclease-likedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01129PE=4SV=1	45.9519527083369	0.35044536499095585	4				NaN	NaN	0	NaN	12107	4277	16379
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16392	41.695	NaN	2335.2	30	0	231.84	0.214	+			659	AEAESMYQI	9	60	521.2308776533253	1040.4472023734504	2	521.2313842773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEAESMYQI_	CON__H-INV:HIT000292931;CON__P05787;CON__Q9H552;ENSG00000170421|ENST00000692008|KRT8;ENST00000409686.2_1_9:102067468-102068890:+|nuORF;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;ENST00000547031.5_1_12:53292389-53294972:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	82.24051045832904	0.08786059719216216	4				NaN	NaN	0	NaN	12110	4280	16391
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16393	41.698	NaN	2174.2	30	0	233.29	0.106	+			49809	VYSRYFTTY	9	60	600.2896494306611	1198.5647459281222	2	600.2900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	85.16082228582465	0.07850854922700509	4				NaN	NaN	0	NaN	12111	4280	16391
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16394	41.7	NaN	2233.8	30	0	451.58	0.106			+	27336	MIGLGSLSVV	10	60	496.2773292042736	990.5401054753472	2	496.2781982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))IGLGSLSVV_	REV__L1M2_dup4231|chr7:155968542-155968983:+|4.120048319926696|0.1764610938163524|4.55|482.0|32|3|anti-sense	73.97473282117947	0.24484687617201792	4				NaN	NaN	0	NaN	12112	4280	16391
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16395	41.702	NaN	1121.8	30	0	90.581	0.106			+	23429	LADAPPGALE	10	52	477.2499678722403	952.4853828112806	2	477.2508850097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LADAPPGALE_	REV__ENSG00000139438|ENST00000538780|FAM222A	49.44154591367651	0.46214596422418036	4				NaN	NaN	0	NaN	12113	4280	16391
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16396	41.704	NaN	1843.6	30	0	126.01	0.106	+			35652	SCSIKVLNLP	10	70	537.3052822232797	NaN	0	537.3052978515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SCSIKVLNLP_	ENST00000510531.5_1_5:6645338-6652038:+|nuORF	47.657333605630114	0.3204131577145918	4				NaN	NaN	0	NaN	12114	4280	16391
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16397	41.705	NaN	2139.4	30	0	262.65	0.036			+	51423	YTVLSPTGAR	10	67	532.7898527295702	1063.5651525259402	2	532.7915649414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YTVLSPTGAR_	REV__ENSG00000154358|ENST00000680850|OBSCN;REV__nc|ENSG00000154358|Q5VST9-2|OBSCN;REV__nc|ENSG00000154358|Q5VST9-3|OBSCN;REV__nc|ENSG00000154358|Q5VST9-6|OBSCN;REV__nc|ENSG00000154358|Q5VST9|OBSCN;REV__OBSCN|p.H7050Tfs*22|1|0.11|ENSG00000154358|chr1:228371922-228371922|C/-|frameshift_variant;REV__OBSCN|p.P6994Lfs*78|1|0.15|ENSG00000154358|chr1:228371756-228371756|C/-|frameshift_variant;REV__OBSCN|p.S5232Ffs*24|1|0.21|ENSG00000154358|chr1:228332900-228332901|-/T|frameshift_variant	34.172542307311794	0.6007644933930345	4				NaN	NaN	0	NaN	12115	4280	16391
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16407	41.727	NaN	3169.4	30	0	662.25	0.214	+			27751	MQQTKQQRE	9	65	588.7935489001316	1175.572544867063	2	588.7947387695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MQQTKQQRE_	ENSG00000164830|ENST00000517566|OXR1;nc|ENSG00000164830|Q8N573-2|OXR1;nc|ENSG00000164830|Q8N573-3|OXR1;nc|ENSG00000164830|Q8N573-5|OXR1;nc|ENSG00000164830|Q8N573-6|OXR1;nc|ENSG00000164830|Q8N573|OXR1;OXR1|p.E529Kfs*13|1|0.09|ENSG00000164830|chr8:106707098-106707098|A/-|frameshift_variant	37.81151784470057	0.4459294069877048	4				NaN	NaN	0	NaN	12122	4283	16406
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16408	41.731	NaN	2059.4	30	0	192.06	0.106	+			42129	SYLTSASSL	9	60	464.73329924016605	927.4520455471321	2	464.7341613769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SYLTSASSL_	ENSG00000104517|ENST00000520539|UBR5;nc|ENSG00000104517|O95071-2|UBR5;UBR5|p.E2121Kfs*28|1|0.39|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant;UBR5|p.E2121Rfs*13|1|0.28|ENSG00000104517|chr8:102277120-102277121|-/T|frameshift_variant;UBR5|p.F2571Lfs*4|2|0.31|ENSG00000104517|chr8:102262044-102262044|A/-|frameshift_variant;UBR5|p.K2120Rfs*13|1|0.24|ENSG00000104517|chr8:102277121-102277122|TT/-|frameshift_variant	90.77665401227738	0.06267569666681755	4				NaN	NaN	0	NaN	12123	4283	16406
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16409	41.733	NaN	1921.6	30	0	169.33	0.106	+			18280	IPKEKFQV	8	61	494.7942597398324	987.5739665464648	2	494.7944030761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IPKEKFQV_	ENSG00000135966|ENST00000393359|TGFBRAP1;TGFBRAP1|p.R743Afs*28|1|0.5|ENSG00000135966|chr2:105269451-105269451|G/-|frameshift_variant	51.19269402634007	0.5868595481438337	4				NaN	NaN	0	NaN	12124	4283	16406
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16410	41.735	NaN	2898.8	30	0	265.23	0.106			+	11552	FPIPQYAL	8	60	474.761196809083	947.507840684966	2	474.76129150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FPIPQYAL_	REV__ENSG00000139613|ENST00000550164|SMARCC2;REV__nc|ENSG00000139613|Q8TAQ2-2|SMARCC2;REV__nc|ENSG00000139613|Q8TAQ2-3|SMARCC2;REV__nc|ENSG00000139613|Q8TAQ2|SMARCC2	52.29916861842294	0.578018602984656	4				NaN	NaN	0	NaN	12125	4283	16406
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16411	41.736	NaN	1919.5	30	0	183.71	0.106	+			49917	VYVDKLAEL	9	71	525.2979408443737	NaN	0	525.2977294921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VYVDKLAEL_	ENSG00000170606|ENST00000304858|HSPA4;HSPA4|p.S737Afs*9|1|0.18|ENSG00000170606|chr5:133103911-133103911|A/-|frameshift_variant	58.78195531508484	0.1545138866451181	4				NaN	NaN	0	NaN	12126	4283	16406
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16412	41.738	NaN	1226.6	30	0	285.72	0.106	+			5518	AVAGLPGAAL	10	37	420.2528754995836	NaN	0	420.2528381347656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AVAGLPGAAL_	ENST00000478216.1_1_9:125652519-125667482:-|nuORF	26.79610172149135	0.4121907004225123	4				NaN	NaN	0	NaN	12127	4283	16406
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16413	41.74	NaN	921.04	30	0	102.06	0.038			+	25678	LRFIQAVRHD	10	51	627.8559079537749	NaN	0	627.8556518554688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LRFIQAVRHD_	REV__ENSG00000204956|ENST00000517417|PCDHGA1;REV__nc|ENSG00000204956|Q9Y5H4-2|PCDHGA1;REV__PCDHGA1|p.Q772Sfs*79|1|0.05|ENSG00000204956|chr5:141332994-141332994|C/-|frameshift_variant	19.996771675451527	0.4201028297492154	4				NaN	NaN	0	NaN	12128	4283	16406
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16418	41.754	NaN	2952.6	30	0	204.18	0.214	+			11837	FSWPGTHRA	9	69	529.7613068089568	NaN	0	529.7608032226562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FSWPGTHRA_	ENSG00000099840|ENST00000395301|IZUMO4;ENST00000498554.5_1_19:2097388-2099029:+|nuORF	45.9519527083369	0.2345902329052062	4				NaN	NaN	0	NaN	12130	4286	16417
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16419	41.758	NaN	1879.8	30	0	287.71	0.035	+			11360	FLHCKKLV	8	59	494.29525224669675	NaN	0	494.29522705078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FLHCKKLV_	ENSG00000196235|ENST00000432763|SUPT5H;ENST00000599335.5_1_19:39959399-39965382:+|nuORF;nc|ENSG00000196235|O00267-2|SUPT5H;SUPT5H|p.A622V|1|0.12|ENSG00000196235|chr19:39471645-39471645|C/T|missense_variant;SUPT5H|p.P800Hfs*154|1|0.21|ENSG00000196235|chr19:39473425-39473425|C/-|frameshift_variant	25.450171626174864	1.7418937515398478	4				NaN	NaN	0	NaN	12131	4286	16417
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16423	41.772	NaN	2839.6	30	0	538.19	0.144				-1	 	0	36	336.5337220643007	1006.5793367931021	3	336.5345153808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12132	4289	16422
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16427	41.794	NaN	2126.4	30	0	136.93	0.214	+			22385	KTIGIHAKY	9	68	515.8057605791726	NaN	0	515.8056030273438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTIGIHAKY_	ENST00000538658.5_1_11:95546665-95550979:+|nuORF	44.116797842482775	0.2472372736944149	4				NaN	NaN	0	NaN	12133	4292	16426
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16428	41.797	NaN	580.17	30	0	84.495	0.03			+	2741	ARALHAVGLG	10	26	322.1939120986025	NaN	0	322.1942443847656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ARALHAVGLG_	REV__ENSG00000125898|ENST00000381941|FAM110A	17.468008924990375	0.4201028297492154	4				NaN	NaN	0	NaN	12134	4292	16426
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16434	41.814	NaN	3547.5	30	0	304.29	0.214	+			36271	SENVLQVHL	9	65	519.7819432975704	1037.5493336619406	2	519.7827758789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SENVLQVHL_	ENSG00000115947|ENST00000392857|ORC4;ENST00000495601.1_1_2:148716324-148733527:-|nuORF;ENST00000496670.6_1_2:148709144-148730385:-|nuORF;nc|ENSG00000115947|O43929-2|ORC4;nc|ENSG00000115947|O43929-3|ORC4	101.25262130126117	0.03792372629710479	4				NaN	NaN	0	NaN	12137	4295	16433
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16435	41.817	NaN	2860.6	30	0	176.44	0.035	+			17322	IAGGTGITILI	11	68	514.8194587423636	1027.6243645515272	2	514.8204956054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IAGGTGITILI_	ENSG00000149534|ENST00000278888|MS4A2;ENST00000440896.2_1_11:59856214-59861079:+|nuORF	37.81151784470057	0.5878881669006212	4				NaN	NaN	0	NaN	12138	4295	16433
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16441	41.832	NaN	1692.6	30	0	117.63	0.214				-1	 	0	50	347.1982704583101	692.3819879834202	2	347.1986999511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12141	4298	16440
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16442	41.836	NaN	4047.3	30	0	308.3	0.106	+			43689	TKHCDNVLY	9	75	546.759664955695	1091.50477697819	2	546.7618408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TKHCDNVLY_	ENSG00000132005|ENST00000254325|RFX1	56.72105179125745	0.24094814563026265	4				NaN	NaN	0	NaN	12142	4298	16440
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16443	41.838	NaN	3394	30	0	880.36	0.106			+	9168	EGPLLCLGKE	10	66	529.7797304438154	1057.5449079544308	2	529.78125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EGPLLCLGKE_	REV__ENSG00000079263|ENST00000392045|SP140;REV__nc|ENSG00000079263|Q13342-2|SP140;REV__nc|ENSG00000079263|Q13342-3|SP140;REV__nc|ENSG00000079263|Q13342-5|SP140;REV__nc|ENSG00000079263|Q13342-6|SP140;REV__SP140|p.F779Lfs*17|1|0.23|ENSG00000079263|chr2:230311202-230311202|T/-|frameshift_variant;REV__SP140|p.K364Ifs*47|1|0.04|ENSG00000079263|chr2:230253348-230253349|-/TTCTC|frameshift_variant;REV__SP140|p.K672Rfs*4|1|0.35|ENSG00000079263|chr2:230294310-230294310|A/-|frameshift_variant;REV__SP140|p.R673Efs*9|1|0.3|ENSG00000079263|chr2:230294309-230294310|-/A|frameshift_variant	47.95952297671804	0.47580206326914537	4				NaN	NaN	0	NaN	12143	4298	16440
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16444	41.84	NaN	1825.4	30	0	187.13	0.106				-1	 	0	59	474.262600400166	946.510647867132	2	474.263916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12144	4298	16440
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16445	41.842	NaN	1000.2	30	0	125.41	0.106			+	-1	CKNGLIMKEV	10	52	575.8018798828125	NaN	0	575.8018798828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_CKNGLIM(Oxidation (M))KEV_	REV__ENSG00000167461|ENST00000300935|RAB8A;REV__ENST00000587156.5_1_19:16222711-16238468:+|nuORF;REV__nc|ENSG00000167461|P61006-2|RAB8A	25.57405402267927	0.4162033004763879	4				NaN	NaN	0	NaN	12145	4298	16440
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16446	41.843	NaN	1807.2	30	0	162.04	0.106	+			51261	YREEGILGF	9	61	542.2762878190379	1082.5380227048756	2	542.2762451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YREEGILGF_	ENSG00000109919|ENST00000302503|MTCH2;MTCH2|p.E275Rfs*4|1|0.17|ENSG00000109919|chr11:47622704-47622704|T/-|frameshift_variant;MTCH2|p.F286Sfs*14|1|0.38|ENSG00000109919|chr11:47618888-47618888|A/-|frameshift_variant	40.77816245573522	0.41113185337114944	4				NaN	NaN	0	NaN	12146	4298	16440
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16447	41.845	NaN	1590.9	30	0	123.14	0.037			+	31661	QNEKLRRAD	9	63	565.3088699368735	NaN	0	565.310546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QNEKLRRAD_	REV__ENSG00000105516|ENST00000222122|DBP;REV__ENSG00000108924|ENST00000226067|HLF;REV__ENSG00000167074|ENST00000266304|TEF;REV__ENST00000570962.1_1_17:53345105-53398237:+|nuORF;REV__ENST00000594723.1_1_19:49134096-49134354:-|nuORF;REV__nc|ENSG00000108924|Q16534-2|HLF;REV__nc|ENSG00000167074|Q10587-2|TEF	51.19269402634007	0.19847346126499396	4				NaN	NaN	0	NaN	12147	4298	16440
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16454	41.862	NaN	3141.3	30	0	494.12	0.214	+			14803	GTLEQWIEK	9	65	552.2892905452567	1102.5640281573133	2	552.289794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTLEQWIEK_	ENSG00000055332|ENST00000233057|EIF2AK2;nc|ENSG00000055332|P19525-2|EIF2AK2	76.16968421966216	0.11411088698345859	4				NaN	NaN	0	NaN	12151	4301	16453
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16455	41.865	NaN	2329.1	30	0	275.95	0.106	+			18911	IVMLTNLK	8	66	466.2847384942241	930.5549240552482	2	466.2846984863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IVMLTNLK_	ENSG00000132334|ENST00000254667|PTPRE;nc|ENSG00000132334|P23469-2|PTPRE;nc|ENSG00000132334|P23469-3|PTPRE	90.77665401227738	0.27511901818546464	4				NaN	NaN	0	NaN	12152	4301	16453
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16456	41.867	NaN	1865.7	30	0	122.61	0.106			+	25888	LSGATSGSGEY	11	59	514.7314517665033	NaN	0	514.7308959960938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSGATSGSGEY_	REV__ENSG00000170558|ENST00000269141|CDH2;REV__nc|ENSG00000170558|P19022-2|CDH2	45.97224482568171	0.34424757290527136	4				NaN	NaN	0	NaN	12153	4301	16453
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16457	41.869	NaN	2041.5	30	0	123.54	0.036			+	17061	HQYVTKLY	8	64	526.2837341050536	NaN	0	526.2835693359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HQYVTKLY_	REV__CON__P02663	35.200714571348534	1.7418937515398478	4				NaN	NaN	0	NaN	12154	4301	16453
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16462	41.884	NaN	2196.5	30	0	246.49	0.214	+			21465	KNGKTSPASK	10	61	509.2886558239132	1016.5627587146264	2	509.78900146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KNGKTSPASK_	ENSG00000138756|ENST00000502613|BMP2K	44.639436926238396	0.506394993251866	4				NaN	NaN	0	NaN	12156	4304	16461
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16463	41.887	NaN	1466.8	30	0	188.05	0.033				-1	 	0	51	425.73655152812836	849.4585501230567	2	425.7371520996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12157	4304	16461
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16468	41.902	NaN	2419.6	30	0	227.21	0.214			+	24296	LFCSVLCKGR	10	72	563.2999080526	1124.585263172	2	563.3001098632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LFCSVLCKGR_	REV__ENST00000307602.8_1_8:42879272-42879317:+|nuORF	51.19269402634007	0.44601001148513897	4				NaN	NaN	0	NaN	12159	4307	16467
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16469	41.906	NaN	1766.6	30	0	166.98	0.106			+	-1	AGDNTMIKCF	10	65	558.2487315511578	NaN	0	558.248779296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_AGDNTM(Oxidation (M))IKCF_	REV__nc|ENSG00000148735|Q5SXH7|PLEKHS1	31.529811441608018	0.39664753963064203	4				NaN	NaN	0	NaN	12160	4307	16467
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16470	41.908	NaN	2125.5	30	0	257.93	0.106				-1	 	0	63	512.2675759337347	1022.5205989342695	2	512.2681884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12161	4307	16467
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16471	41.91	NaN	1467.9	30	0	121.67	0.106	+			6768	CEQNNRWYL	9	65	613.2760009765625	NaN	0	613.2760009765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_CEQNNRWYL_	ENSG00000137747|ENST00000524993|TMPRSS13;nc|ENSG00000137747|Q9BYE2-2|TMPRSS13;nc|ENSG00000137747|Q9BYE2-3|TMPRSS13;nc|ENSG00000137747|Q9BYE2|TMPRSS13	40.77816245573522	0.2702456086868081	4				NaN	NaN	0	NaN	12162	4307	16467
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16472	41.911	NaN	1132.8	30	0	111.66	0.033			+	23563	LALFLLLP	8	55	450.30020618875324	NaN	0	450.3005676269531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LALFLLLP_	REV__ENSG00000063660|ENST00000264039|GPC1;REV__ENST00000469694.5_1_2:241404001-241405704:+|nuORF	43.626045697637714	1.7418937515398478	4				NaN	NaN	0	NaN	12163	4307	16467
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16477	41.926	NaN	3261.5	30	0	175.17	0.214				-1	 	0	63	369.21160892225345	736.4086649113069	2	369.2115478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12165	4310	16476
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16478	41.93	NaN	2373	30	0	295.96	0.034	+			9273	EHGIIKEC	8	62	464.73329924016605	927.4520455471321	2	465.23284912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EHGIIKEC_	ENSG00000026103|ENST00000652046|FAS;ENST00000371857.7_1_10:90751224-90770455:+|nuORF;FAS|p.A301Sfs*20|1|0.36|ENSG00000026103|chr10:89014336-89014337|-/A|frameshift_variant;nc|ENSG00000026103|P25445-6|FAS;nc|ENSG00000026103|P25445-7|FAS	44.116797842482775	0.6307669463330267	4				NaN	NaN	0	NaN	12166	4310	16476
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16482	41.944	NaN	2374.1	30	0	257.78	0.214	+			26411	LTENSHLFL	9	66	537.2840370662516	1072.553521199303	2	537.2849731445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LTENSHLFL_	ZFP30|p.T131Pfs*161|1|0.12|ENSG00000120784|chr19:37636150-37636150|T/-|frameshift_variant	42.47446043378293	0.39123495718708534	4				NaN	NaN	0	NaN	12167	4313	16481
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16483	41.948	NaN	2203.9	30	0	170.35	0.106	+			34058	RSMMRLAF	8	61	522.260764580331	1042.506976227462	2	522.2623901367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Oxidation (M)	_RSM(Oxidation (M))M(Oxidation (M))RLAF_	SPPL2B|p.G128Vfs*32|2|0.31|ENSG00000005206|chr19:2338760-2338760|G/-|frameshift_variant	42.396135135203025	0.6414440140393314	4				NaN	NaN	0	NaN	12168	4313	16481
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16484	41.95	NaN	1544.9	30	0	97.553	0.037				-1	YMKKQPDIT	9	67	570.2922403249474	NaN	0	570.2924194335938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_YM(Oxidation (M))KKQPDIT_	CCNA2|p.P273Qfs*3|1|0.35|ENSG00000145386|chr4:121819556-121819556|G/-|frameshift_variant;ENSG00000133101|ENST00000255465|CCNA1;ENSG00000145386|ENST00000274026|CCNA2;nc|ENSG00000133101|P78396-2|CCNA1;nc|ENSG00000133101|P78396|CCNA1	27.882242232435846	0.3367954786602879	4				NaN	NaN	0	NaN	12169	4313	16481
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16489	41.964	NaN	1818.8	30	0	113.53	0.214				-1	 	0	65	524.2780291466424	523.2707526800424	1	524.2787475585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12171	4316	16488
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16490	41.968	NaN	1820.6	30	0	116.65	0.106			+	13156	GGRGRALVF	9	63	466.77683200545863	NaN	0	466.77679443359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GGRGRALVF_	REV__ENST00000484621.1_1_9:36401018-36401120:-|nuORF	40.5726180659479	0.27166212580479165	4				NaN	NaN	0	NaN	12172	4316	16488
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16491	41.97	NaN	1425.4	30	0	195.7	0.106			+	10122	ESNIALLR	8	55	458.2657866330456	914.5170203328912	2	458.26629638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ESNIALLR_	REV__nc|ENSG00000155657|Q8WZ42-6|TTN	64.20726635412375	0.4601301477144759	4				NaN	NaN	0	NaN	12173	4316	16488
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16492	41.972	NaN	1605.4	30	0	93.204	0.106			+	44807	TTRASRPLSSA	11	66	573.816162109375	NaN	0	573.816162109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TTRASRPLSSA_	REV__ENST00000480925.1_1_9:100819070-100819196:+|nuORF	27.047317107675042	0.44487757903053116	4				NaN	NaN	0	NaN	12174	4316	16488
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16493	41.974	NaN	1638.4	30	0	87.997	0.106	+			9577	ELIQPGAVKV	10	55	527.3179321289062	NaN	0	527.3179321289062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ELIQPGAVKV_	ENSG00000125730|ENST00000245907|C3;ENST00000599899.5_1_19:6677895-6682275:-|nuORF	39.252832667884924	0.37128895876774715	4				NaN	NaN	0	NaN	12175	4316	16488
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16494	41.975	NaN	1279.5	30	0	92.666	0.034			+	9679	ELVNLLKL	8	54	471.30439339487356	940.5942338565471	2	471.80584716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ELVNLLKL_	REV__ENSG00000177138|ENST00000327220|FAM9B;REV__nc|ENSG00000177138|Q8IZU0-2|FAM9B	53.351449002276354	0.5676011784961348	4				NaN	NaN	0	NaN	12176	4316	16488
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16501	41.994	NaN	3130.9	30	0	860.62	0.214				-1	 	0	57	483.2499332586432	964.4853135840864	2	483.25006103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12180	4319	16500
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16502	41.997	NaN	2535.5	30	0	241.44	0.106			+	-1	HQQKMEIY	8	63	546.759664955695	1091.50477697819	2	547.2625122070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_HQQKM(Oxidation (M))EIY_	REV__ENSG00000113318|ENST00000265081|MSH3;REV__MSH3|p.N1020Ifs*40|1|0.46|ENSG00000113318|chr5:80864865-80864865|A/-|frameshift_variant;REV__MSH3|p.N1020Kfs*17|1|0.43|ENSG00000113318|chr5:80864864-80864865|-/A|frameshift_variant;REV__MSH3|p.N861Mfs*6|1|0.43|ENSG00000113318|chr5:80792766-80792766|A/-|frameshift_variant;REV__MSH3|p.V745Ifs*28|1|0.05|ENSG00000113318|chr5:80768981-80768982|-/CATATTCGAAGTTTAT|frameshift_variant	44.116797842482775	0.6307669463330267	4				NaN	NaN	0	NaN	12181	4319	16500
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16503	41.999	NaN	2419.3	30	0	110.4	0.035	+			44210	TRISRHQF	8	65	522.7892306768564	1043.5639084205127	2	522.7904663085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TRISRHQF_	HELB|p.R671H|1|0.12|ENSG00000127311|chr12:66318649-66318649|G/A|missense_variant	40.5726180659479	0.6527593143185008	4				NaN	NaN	0	NaN	12182	4319	16500
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16507	42.014	NaN	5114.9	30	0	330.68	0.214				-1	 	0	73	502.8098244907337	1003.6050960482675	2	502.81048583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12183	4322	16506
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16508	42.017	NaN	1898.8	30	0	308.68	0.106			+	-1	TYAMMLADVM	10	63	597.247967822268	1192.481382711336	2	597.24853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	3 Oxidation (M)	_TYAM(Oxidation (M))M(Oxidation (M))LADVM(Oxidation (M))_	REV__CAMSAP1|p.E781Afs*3|1|0.06|ENSG00000130559|chr9:135822319-135822320|-/G|frameshift_variant;REV__CAMSAP1|p.P417Sfs*23|1|0.04|ENSG00000130559|chr9:135824855-135824856|-/A|frameshift_variant;REV__CAMSAP1|p.Q633Sfs*8|1|0.28|ENSG00000130559|chr9:135822764-135822764|G/-|frameshift_variant;REV__CAMSAP1|p.V388Rfs*19|1|0.26|ENSG00000130559|chr9:135827468-135827469|-/G|frameshift_variant;REV__ENSG00000130559|ENST00000389532|CAMSAP1;REV__ENST00000312405.10_1_9:138742295-138774724:-|nuORF;REV__ENST00000460094.1_1_9:138758268-138774700:-|nuORF;REV__nc|ENSG00000130559|Q5T5Y3-3|CAMSAP1	56.72105179125745	0.3956618550748046	4				NaN	NaN	0	NaN	12184	4322	16506
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16509	42.019	NaN	1515.7	30	0	201.73	0.106			+	8964	EFGAGAWAQ	9	61	468.713901764449	NaN	0	468.71392822265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EFGAGAWAQ_	REV__nc|ENSG00000065989|P27815-2|PDE4A	35.61828744233558	0.29773779453147337	4				NaN	NaN	0	NaN	12185	4322	16506
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16510	42.021	NaN	2705.7	30	0	847.83	0.106				-1	GVMLLNLEAM	10	67	561.7820765629701	1121.5496001927402	2	561.7835693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Oxidation (M)	_GVM(Oxidation (M))LLNLEAM(Oxidation (M))_	ENSG00000173950|ENST00000310380|XXYLT1;ENST00000473200.1_1_3:194790446-194874713:-|nuORF;nc|ENSG00000173950|Q8NBI6-2|XXYLT1;nc|ENSG00000173950|Q8NBI6-3|XXYLT1	44.116797842482775	0.5112108506279902	4				NaN	NaN	0	NaN	12186	4322	16506
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16511	42.023	NaN	2933	30	0	524.49	0.106			+	9967	EREYLQSL	8	61	519.26626846507	1036.5179839969398	2	519.2667846679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EREYLQSL_	REV__EXOC1|p.R416Q|1|0.27|ENSG00000090989|chr4:55883845-55883845|G/A|missense_variant	54.776311868738084	0.5534952410049249	4				NaN	NaN	0	NaN	12187	4322	16506
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16512	42.025	NaN	1464.2	30	0	139.16	0.106	+			44382	TSLGSVMAPL	10	54	496.26001824071875	NaN	0	496.259521484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_TSLGSVM(Oxidation (M))APL_	ADAMTS14|p.G708Vfs*9|1|0.36|ENSG00000138316|chr10:70744126-70744126|G/-|frameshift_variant;ADAMTS14|p.H752Tfs*5|1|0.34|ENSG00000138316|chr10:70745292-70745292|C/-|frameshift_variant;ENSG00000138316|ENST00000373207|ADAMTS14;nc|ENSG00000138316|Q8WXS8-2|ADAMTS14;nc|ENSG00000138316|Q8WXS8-3|ADAMTS14;nc|ENSG00000138316|Q8WXS8-4|ADAMTS14	47.657333605630114	0.3204131577145918	4				NaN	NaN	0	NaN	12188	4322	16506
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16513	42.026	NaN	1533.3	30	0	99.869	0.035			+	42592	TASYVKAKY	9	61	515.7829061967494	NaN	0	515.7832641601562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TASYVKAKY_	REV__ANKRD13D|p.E264K|1|0.27|ENSG00000172932|chr11:67300101-67300101|G/A|missense_variant	35.61828744233558	0.29773779453147337	4				NaN	NaN	0	NaN	12189	4322	16506
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16519	42.042	NaN	2509.1	30	0	225.02	0.214			+	51103	YLTLLMVW	8	65	548.7915474747873	1095.5685420163745	2	548.793212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))YLTLLM(Oxidation (M))VW_	REV__ENSG00000170961|ENST00000303924|HAS2;REV__HAS2|p.A520T|1|0.06|ENSG00000170961|chr8:121614210-121614210|C/T|missense_variant	54.76467175910256	0.5536104764165384	4				NaN	NaN	0	NaN	12192	4325	16518
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16520	42.045	NaN	2233.9	30	0	377.86	0.106	+			14615	GTGIVGVFVK	10	65	488.7941902708895	975.573827608579	2	488.79449462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTGIVGVFVK_	ENSG00000107438|ENST00000329399|PDLIM1	44.377184641726394	0.5088115166961078	4				NaN	NaN	0	NaN	12193	4325	16518
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16521	42.047	NaN	2368.2	30	0	180.15	0.106	+			49810	VYSRYFTTY	9	68	600.2896494306611	1198.5647459281222	2	600.2891845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	39.252832667884924	0.4290233611298554	4				NaN	NaN	0	NaN	12194	4325	16518
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16522	42.049	NaN	2434.9	30	0	376.28	0.106			+	29747	PHRLIQFI	8	59	512.3079833984375	NaN	0	512.3079833984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PHRLIQFI_	REV__ENST00000484846.1_1_11:64623516-64624089:-|nuORF	50.0245360154114	1.7418937515398478	4				NaN	NaN	0	NaN	12195	4325	16518
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16523	42.051	NaN	1301.5	30	0	128.48	0.038			+	-1	LCHCLAYAER	10	63	618.2864955881065	NaN	0	618.2879028320312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_LC(Carbamidomethyl (C))HCLAYAER_	REV__ENSG00000168090|ENST00000303904|COPS6	34.172542307311794	0.38797011891751465	4				NaN	NaN	0	NaN	12196	4325	16518
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16528	42.066	NaN	3454.7	30	0	303.58	0.214	+			27901	MTSIFIAQHE	10	71	588.7899779747087	1175.5654030162173	2	588.7908935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MTSIFIAQHE_	ENSG00000047365|ENST00000303965|ARAP2	65.15724298150197	0.31893571707528906	4				NaN	NaN	0	NaN	12198	4328	16527
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16529	42.069	NaN	2974.5	30	0	197.13	0.036	+			49578	VYENVSHFL	9	64	554.2762965507357	1106.5380401682712	2	554.7806396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYENVSHFL_	ENSG00000164933|ENST00000297578|SLC25A32	79.71258880314673	0.09879134589249085	4				NaN	NaN	0	NaN	12199	4328	16527
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16534	42.084	NaN	2605	30	0	362.76	0.144			+	-1	RPSPLQECS	9	62	537.2571047024105	1072.499656471621	2	537.7601318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_RPSPLQEC(Carbamidomethyl (C))S_	REV__ENST00000336156.9_1_22:45591936-45592077:-|nuORF	49.44154591367651	0.3095138337212152	4				NaN	NaN	0	NaN	12201	4331	16533
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16538	42.101	NaN	1689.3	30	0	220.35	0.142	+			23591	LAMRPLASL	9	65	486.28905260399074	970.5635522747815	2	486.2889099121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LAMRPLASL_	ENSG00000161204|ENST00000429586|ABCF3;ENST00000468892.5_1_3:183910449-183911483:+|nuORF;ENST00000473311.5_1_3:183906074-183911483:+|nuORF;ENST00000480539.1_1_3:183910945-183911023:+|nuORF;nc|ENSG00000161204|Q9NUQ8-2|ABCF3	67.49366992349736	0.1516260258713357	4				NaN	NaN	0	NaN	12202	4334	16537
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16543	42.119	NaN	2596.8	30	0	533.96	0.214			+	33355	RHKRGLSA	8	58	462.7786211050573	923.5426892769146	2	462.7786865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RHKRGLSA_	REV__ENSG00000165553|ENST00000298352|NGB	35.61828744233558	0.6843154725607303	4				NaN	NaN	0	NaN	12204	4337	16542
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16544	42.122	NaN	2170.2	30	0	322.13	0.106				-1	 	0	39	336.5337220643007	1006.5793367931021	3	336.5345153808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12205	4337	16542
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16545	42.124	NaN	1838.1	30	0	144.7	0.106			+	28333	NEGQPPKVF	9	63	508.2657947697185	1014.5170366062371	2	508.26702880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NEGQPPKVF_	REV__ENSG00000099957|ENST00000413302|P2RX6;REV__ENST00000439119.5_1_22:21389692-21399270:-|nuORF;REV__nc|ENSG00000099957|O15547-2|P2RX6	47.95952297671804	0.32689736945648856	4				NaN	NaN	0	NaN	12206	4337	16542
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16546	42.126	NaN	1564.5	30	0	157.26	0.106				-1	 	0	69	576.2888480760238	575.2815716094237	1	576.2884521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12207	4337	16542
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16547	42.128	NaN	1132.5	30	0	85.163	0.03	+			36624	SGGGGGDH	8	48	322.1254159361693	642.2362789391386	2	322.1273193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SGGGGGDH_	sp|F5HC97|VPAP_HCMVMDNApolymeraseprocessivityfactorOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL44PE=3SV=1;sp|P16790|VPAP_HCMVADNApolymeraseprocessivityfactorOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL44PE=1SV=1	8.231297230196988	0.7812220690224883	4				NaN	NaN	0	NaN	12208	4337	16542
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16551	42.142	NaN	1940.8	30	0	192.25	0.214	+			48224	VTAVFLVTSG	10	59	497.2836659502426	992.5527789672852	2	497.2842102050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTAVFLVTSG_	SLC44A5|p.A396V|1|0.31|ENSG00000137968|chr1:75219336-75219336|G/A|missense_variant	45.97224482568171	0.49411383603842696	4				NaN	NaN	0	NaN	12209	4340	16550
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16552	42.146	NaN	1332.4	30	0	257.29	0.034	+			47335	VPDLVHVM	8	52	455.2468719500562	NaN	0	455.2469787597656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VPDLVHVM_	ENSG00000100614|ENST00000395076|PPM1A;nc|ENSG00000100614|P35813-3|PPM1A;PPM1A|p.R335H|1|0.37|ENSG00000100614|chr14:60289857-60289857|G/A|missense_variant	52.29916861842294	1.7418937515398478	4				NaN	NaN	0	NaN	12210	4340	16550
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16558	42.162	NaN	2275.9	30	0	326.04	0.144			+	50246	WPLLHYLY	8	66	552.7995398235547	1103.5845267139093	2	552.7998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WPLLHYLY_	REV__tr|U7T5N2|U7T5N2_FUSNUVirB4familytypeIVsecretion/conjugaltransferATPaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00023PE=3SV=1	33.49298260027079	0.7007254697536482	4				NaN	NaN	0	NaN	12213	4343	16557
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16562	42.178	NaN	1639.2	30	0	107.92	0.214				-1	 	0	49	347.19822372173473	692.3818945102695	2	347.1986999511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12214	4346	16561
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16563	42.182	NaN	6145.8	30	0	858.83	0.106	+			14934	GTMEWIMIK	9	77	562.7770667385251	1123.5395805438502	2	562.7777099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_GTM(Oxidation (M))EWIMIK_	ENSG00000168273|ENST00000477703|UQCC5	101.60071028292904	0.0375685401170269	4				NaN	NaN	0	NaN	12215	4346	16561
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16564	42.184	NaN	1824.4	30	0	238.91	0.036	+			50978	YILFFLGDP	9	68	542.7880859375	NaN	0	542.7880859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YILFFLGDP_	ENSG00000139508|ENST00000266943|SLC46A3;nc|ENSG00000139508|Q7Z3Q1-2|SLC46A3;nc|ENSG00000139508|Q7Z3Q1-3|SLC46A3;SLC46A3|p.L309*|1|0.24|ENSG00000139508|chr13:28712814-28712814|A/-|frameshift_variant	44.53106598305862	0.24438232876904814	4				NaN	NaN	0	NaN	12216	4346	16561
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16570	42.2	NaN	2980.8	30	0	120.49	0.214	+			30034	PPRARAGG	8	62	391.2249324252717	780.4353119173434	2	391.2250061035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PPRARAGG_	ENSG00000137261|ENST00000378214|KIAA0319;nc|ENSG00000137261|Q5VV43-2|KIAA0319;nc|ENSG00000137261|Q5VV43-3|KIAA0319;nc|ENSG00000137261|Q5VV43-4|KIAA0319	21.70233525837049	0.7917639344264583	4				NaN	NaN	0	NaN	12219	4349	16569
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16571	42.204	NaN	2328.5	30	0	216.95	0.106			+	42434	TALHLWSE	8	63	478.7454860925114	955.4764192518228	2	478.7458190917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TALHLWSE_	REV__ENST00000575531.5_1_16:4407102-4412712:-|nuORF	47.91560031466742	0.6071945918984287	4				NaN	NaN	0	NaN	12220	4349	16569
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16572	42.206	NaN	1940.2	30	0	374.89	0.106			+	45158	TVLVLPKLG	9	61	470.31511114304305	938.6156693528861	2	470.3155212402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVLVLPKLG_	REV__CATSPERG|p.P884Qfs*18|1|0.48|ENSG00000099338|chr19:38367188-38367188|C/-|frameshift_variant;REV__ENSG00000099338|ENST00000409235|CATSPERG	29.14955571784316	0.5308295550522326	4				NaN	NaN	0	NaN	12221	4349	16569
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16573	42.207	NaN	5145.4	30	0	1220.6	0.106				-1	 	0	63	466.72815597961085	931.4417590260217	2	466.7284851074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12222	4349	16569
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16574	42.209	NaN	2799.7	30	0	217.51	0.036	+			50873	YFFLGNLAF	9	66	546.281005859375	NaN	0	546.281005859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YFFLGNLAF_	ENSG00000176294|ENST00000557677|OR4N2;OR4N2|p.L59V|1|0.34|ENSG00000176294|chr14:19827623-19827623|C/G|missense_variant	47.91560031466742	0.22105767942158736	4				NaN	NaN	0	NaN	12223	4349	16569
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16579	42.224	NaN	1708.3	30	0	122.95	0.214	+			23807	LCPSPSPQS	9	53	458.2149565197042	914.4153601062084	2	458.2154235839844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LCPSPSPQS_	ENST00000576487.5_1_17:7011095-7018009:-|nuORF	47.91560031466742	0.327412564698279	4				NaN	NaN	0	NaN	12225	4352	16578
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16580	42.227	NaN	1985.7	30	0	204.63	0.106			+	-1	VSMLVQSIF	9	68	520.2774658203125	NaN	0	520.2774658203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_VSM(Oxidation (M))LVQSIF_	REV__SVOPL|p.A456V|1|0.23|ENSG00000157703|chr7:138596517-138596517|G/A|missense_variant	51.33545320467046	0.19748963086191895	4				NaN	NaN	0	NaN	12226	4352	16578
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16581	42.229	NaN	2324.2	30	0	398.51	0.106			+	37956	SPFRVLRL	8	63	494.3069687055747	986.5993844779495	2	494.30682373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SPFRVLRL_	REV__ENST00000433867.5_3_19:47219703-47220288:-|nuORF	45.9519527083369	0.6193794311207887	4				NaN	NaN	0	NaN	12227	4352	16578
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16582	42.231	NaN	2195.9	30	0	363.02	0.034				-1	 	0	61	474.262600400166	946.510647867132	2	474.2630310058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12228	4352	16578
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16586	42.245	NaN	2361	30	0	236.22	0.214			+	10438	EVLAGLSTLL	10	65	508.30498183481797	NaN	0	508.3048400878906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EVLAGLSTLL_	REV__ENST00000380483.7_1_X:15262630-15266835:-|nuORF	47.657333605630114	0.3204131577145918	4				NaN	NaN	0	NaN	12229	4355	16585
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16587	42.248	NaN	1537.3	30	0	133.78	0.106			+	32984	REEGLLLEP	9	57	528.2926344447155	NaN	0	528.2926635742188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_REEGLLLEP_	REV__CDK12|p.G1271Dfs*23|2|0.26|ENSG00000167258|chr17:39530648-39530648|C/-|frameshift_variant;REV__CDK12|p.P1267Lfs*27|1|0.33|ENSG00000167258|chr17:39530639-39530639|C/-|frameshift_variant;REV__CDK12|p.Q937Kfs*9|1|0.2|ENSG00000167258|chr17:39515766-39515766|T/-|frameshift_variant;REV__CDK13|p.K911Nfs*13|1|0.17|ENSG00000065883|chr7:40063048-40063048|A/-|frameshift_variant;REV__CDK13|p.R880H|1|0.25|ENSG00000065883|chr7:40062864-40062864|G/A|missense_variant;REV__ENSG00000065883|ENST00000181839|CDK13;REV__ENSG00000167258|ENST00000447079|CDK12;REV__nc|ENSG00000065883|Q14004-2|CDK13;REV__nc|ENSG00000167258|Q9NYV4-2|CDK12;REV__nc|ENSG00000167258|Q9NYV4-3|CDK12	25.57405402267927	0.3484490411150625	4				NaN	NaN	0	NaN	12230	4355	16585
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16588	42.25	NaN	2564.9	30	0	238.62	0.106	+			42180	SYVQVTSNF	9	64	522.753184333211	1043.491815733222	2	522.7556762695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SYVQVTSNF_	ENSG00000072364|ENST00000265343|AFF4	59.93077597824379	0.21419174904018318	4				NaN	NaN	0	NaN	12231	4355	16585
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16589	42.252	NaN	1802.6	30	0	191.5	0.106			+	-1	KFLKTQEL	8	63	524.8054760247343	1047.5963991162685	2	524.8058471679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))KFLKTQEL_	REV__ENST00000373383.8_1_X:74523299-74523356:+|nuORF	32.81241826257853	0.7059802730411993	4				NaN	NaN	0	NaN	12232	4355	16585
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16590	42.254	NaN	1244.1	30	0	168.99	0.106			+	35174	SAIFSEGKI	9	59	476.2601059303422	NaN	0	476.26019287109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SAIFSEGKI_	REV__ENST00000359195.3_1_7:106505947-106508023:+|nuORF	37.81151784470057	0.28666463014928195	4				NaN	NaN	0	NaN	12233	4355	16585
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16591	42.256	NaN	1446	30	0	130.32	0.036	+			11615	FPTVSSSIDK	10	63	540.780753680481	1079.5469544277619	2	540.2811279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FPTVSSSIDK_	ENSG00000197233|ENST00000335302|OR1J2	42.86426827375447	0.522752283233888	4				NaN	NaN	0	NaN	12234	4355	16585
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16598	42.272	NaN	4690.4	30	0	214.6	0.215				-1	 	0	73	369.21160892225345	736.4086649113069	2	369.2118835449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12238	4358	16597
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16599	42.276	NaN	1840.1	30	0	124.76	0.106			+	35675	SDGGGGGH	8	47	322.1254159361693	642.2362789391386	2	322.6263122558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SDGGGGGH_	REV__ENSG00000131398|ENST00000477616|KCNC3;REV__KCNC3|p.G627Efs*27|3|0.37|ENSG00000131398|chr19:50323073-50323073|C/-|frameshift_variant;REV__KCNC3|p.V354Cfs*74|1|0.26|ENSG00000131398|chr19:50323893-50323893|C/-|frameshift_variant	20.481830146152948	0.8005983782650069	4				NaN	NaN	0	NaN	12239	4358	16597
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16600	42.278	NaN	2378.8	30	0	262.35	0.106			+	2111	ALGPPHVQPA	10	61	493.7736923491369	985.5328317650739	2	493.7745666503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ALGPPHVQPA_	REV__ENSG00000095951|ENST00000379388|HIVEP1;REV__nc|ENSG00000095951|P15822-2|HIVEP1;REV__nc|ENSG00000095951|P15822-3|HIVEP1	50.0245360154114	0.45677400244613614	4				NaN	NaN	0	NaN	12240	4358	16597
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16601	42.279	NaN	2351.3	30	0	225.38	0.035	+			26783	LVRRMLML	8	56	516.3152496222893	1030.6159463113786	2	516.31640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LVRRMLML_	CASK|p.N757Tfs*40|1|0.18|ENSG00000147044|chrX:41534753-41534753|T/-|frameshift_variant;ENSG00000147044|ENST00000378163|CASK;ENST00000486402.1_1_X:41519640-41524682:-|nuORF;nc|ENSG00000147044|O14936-2|CASK;nc|ENSG00000147044|O14936-3|CASK;nc|ENSG00000147044|O14936-4|CASK;nc|ENSG00000147044|O14936-6|CASK	68.484700416344	0.4195245774506064	4				NaN	NaN	0	NaN	12241	4358	16597
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16605	42.293	NaN	3759.4	30	0	1075.9	0.214	+			45656	TYTVKIVAI	9	66	504.31015159027993	1006.6057502473599	2	504.3105163574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TYTVKIVAI_	DSG2|p.I845*|1|0.27|ENSG00000046604|chr18:31545914-31545914|A/-|frameshift_variant;ENSG00000046604|ENST00000261590|DSG2	62.107414245175825	0.1960472003779324	4				NaN	NaN	0	NaN	12242	4361	16604
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16606	42.297	NaN	1817.2	30	0	188.94	0.106			+	4541	ATLAVTFAVA	10	60	482.2786740361618	962.5427951391237	2	482.279052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATLAVTFAVA_	REV__ENSG00000176401|ENST00000326282|EID2B	56.72105179125745	0.3956618550748046	4				NaN	NaN	0	NaN	12243	4361	16604
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16607	42.299	NaN	1611.7	30	0	150.54	0.036			+	-1	NYIELDTTM	9	53	558.2495170783117	NaN	0	558.2505493164062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_NYIELDTTM(Oxidation (M))_	REV__ENSG00000096872|ENST00000380062|IFT74	34.172542307311794	0.30503706118289736	4				NaN	NaN	0	NaN	12244	4361	16604
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16611	42.312	NaN	3574.9	30	0	640.67	0.214				-1	SLSGFVVLGC	10	70	519.7675086918615	1037.520464450523	2	519.7682495117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SLSGFVVLGC(Carbamidomethyl (C))_	ENSG00000198822|ENST00000361669|GRM3	30.503639358989545	0.6307262373768582	4				NaN	NaN	0	NaN	12245	4364	16610
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16612	42.316	NaN	2694.7	30	0	221.01	0.036	+			49907	VYTTNIQEL	9	65	540.780753680481	1079.5469544277619	2	540.782958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYTTNIQEL_	ENSG00000110031|ENST00000395074|LPXN;ENST00000529915.1_1_11:58322280-58343350:-|nuORF;nc|ENSG00000110031|O60711-2|LPXN	58.22992032128504	0.22837015374068087	4				NaN	NaN	0	NaN	12246	4364	16610
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16616	42.33	NaN	4431.7	30	0	370.43	0.214	+			6575	AYLEAIHNF	9	64	539.2712740922815	1076.5279952513629	2	539.2723388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AYLEAIHNF_	ENSG00000042753|ENST00000263270|AP2S1	98.62937762414208	0.04060045538121712	4				NaN	NaN	0	NaN	12247	4367	16615
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16617	42.333	NaN	2912.1	30	0	333.24	0.106				-1	 	0	55	373.0444497444948	372.0371732778948	1	373.0447082519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12248	4367	16615
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16618	42.335	NaN	1819.9	30	0	159.22	0.106	+			46125	VDKLMPVI	8	55	457.7719828495676	NaN	0	457.7721862792969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VDKLMPVI_	ENSG00000198380|ENST00000357308|GFPT1;nc|ENSG00000198380|Q06210-2|GFPT1	60.97194046774394	1.7418937515398478	4				NaN	NaN	0	NaN	12249	4367	16615
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16619	42.337	NaN	1893.7	30	0	223.92	0.106	+			46811	VIAGVLTIAL	10	58	485.3201649593999	968.6257769855998	2	485.32037353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VIAGVLTIAL_	KCNA2|p.A395V|1|0.2|ENSG00000177301|chr1:110603599-110603599|G/A|missense_variant	31.954861631926434	0.6188749698950511	4				NaN	NaN	0	NaN	12250	4367	16615
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16620	42.339	NaN	1142	30	0	75.638	0.034	+			2200	ALPSHLVPA	9	52	452.7662703689144	903.5179878046288	2	452.7663269042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ALPSHLVPA_	ENSG00000174145|ENST00000309447|NWD2;NWD2|p.D1262Gfs*18|1|0.39|ENSG00000174145|chr4:37445769-37445770|-/G|frameshift_variant;NWD2|p.E713Rfs*7|1|0.36|ENSG00000174145|chr4:37444124-37444124|G/-|frameshift_variant;NWD2|p.K1317Nfs*43|1|0.35|ENSG00000174145|chr4:37445936-37445936|A/-|frameshift_variant;NWD2|p.W1259Gfs*22|4|0.26|ENSG00000174145|chr4:37445757-37445757|T/-|frameshift_variant	68.484700416344	0.1473408039581241	4				NaN	NaN	0	NaN	12251	4367	16615
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16625	42.353	NaN	2556.3	30	0	359.8	0.214	+			10823	FAPEKPGPQ	9	63	485.7526220366794	969.4906911401588	2	485.7529602050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FAPEKPGPQ_	ENSG00000141480|ENST00000269260|ARRB2;ENST00000573886.5_1_17:4620541-4621453:+|nuORF;nc|ENSG00000141480|P32121-2|ARRB2;nc|ENSG00000141480|P32121-3|ARRB2;nc|ENSG00000141480|P32121-4|ARRB2;nc|ENSG00000141480|P32121-5|ARRB2	40.77816245573522	0.41113185337114944	4				NaN	NaN	0	NaN	12253	4370	16624
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16626	42.357	NaN	3886.7	30	0	929.54	0.106	+			42288	TAEGTVFHF	9	68	504.74227325304736	1007.4699935728947	2	504.74310302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAEGTVFHF_	ENSG00000141076|ENST00000314423|UTP4;nc|ENSG00000141076|Q969X6-2|UTP4;nc|ENSG00000141076|Q969X6-3|UTP4	51.33545320467046	0.2872990594074956	4				NaN	NaN	0	NaN	12254	4370	16624
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16627	42.359	NaN	2076.2	30	0	155.76	0.035				-1	 	0	63	508.79170883902594	1015.5688647448519	2	508.7916564941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12255	4370	16624
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16632	42.373	NaN	1317	30	0	132.89	0.214	+			25538	LPTSSVPETR	10	67	543.7954181070654	NaN	0	543.7958984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LPTSSVPETR_	ENSG00000152082|ENST00000281871|MZT2B;ENSG00000173272|ENST00000309451|MZT2A;ENST00000410036.2_1_2:132241636-132250313:-|nuORF;ENST00000480182.1_1_2:130940128-130948196:+|nuORF;ENST00000485869.1_1_2:130940017-130940434:+|nuORF;ENST00000488586.1_1_2:132244081-132249533:-|nuORF	30.317721548370564	0.4006274431774794	4				NaN	NaN	0	NaN	12257	4373	16631
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16633	42.376	NaN	965.16	30	0	99.795	0.035			+	32304	QTPVAHRGL	9	36	489.7755432128906	NaN	0	489.7755432128906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QTPVAHRGL_	REV__ENST00000222248.3_1_19:17988859-17994831:+|nuORF	18.324413293986947	0.3749620627292244	4				NaN	NaN	0	NaN	12258	4373	16631
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16638	42.391	NaN	2800	30	0	222.38	0.213	+			49811	VYSRYFTTY	9	72	600.2896494306611	1198.5647459281222	2	600.2903442382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	82.7504851949679	0.08565546331141553	4				NaN	NaN	0	NaN	12260	4376	16637
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16639	42.394	NaN	2258.5	30	0	271.99	0.106	+			38099	SPVLPAALDAV	11	63	526.803134161169	NaN	0	526.8029174804688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SPVLPAALDAV_	nc|ENSG00000063245|Q9Y6I3-1|EPN1	50.033510581677724	0.3150780456176802	4				NaN	NaN	0	NaN	12261	4376	16637
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16640	42.396	NaN	1762.1	30	0	93.925	0.036			+	10928	FDNEKPNQI	9	65	552.7690213932173	NaN	0	552.7958374023438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FDNEKPNQI_	REV__ENSG00000167117|ENST00000450727|ANKRD40CL	49.536043120802724	0.20989033510253738	4				NaN	NaN	0	NaN	12262	4376	16637
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16645	42.41	NaN	2861.1	30	0	378.94	0.214	+			19171	IYSFQAFY	8	59	519.7500233135571	NaN	0	519.7498779296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IYSFQAFY_	ENSG00000143815|ENST00000272163|LBR;ENST00000424022.2_1_1:225594357-225599062:-|nuORF	57.81127852772723	1.7418937515398478	4				NaN	NaN	0	NaN	12264	4379	16644
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16646	42.414	NaN	1161.1	30	0	174.19	0.106	+			23979	LDVMAEMQ	8	55	468.713901764449	NaN	0	468.7142028808594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LDVMAEMQ_	ENST00000368654.7_1_10:129914037-129921160:-|nuORF;ENST00000478293.1_1_10:129914037-129924496:-|nuORF	55.50420428727701	1.7418937515398478	4				NaN	NaN	0	NaN	12265	4379	16644
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16647	42.416	NaN	2385	30	0	281.1	0.106			+	2140	ALLCNVEEA	9	51	481.23586057627006	960.4571682193401	2	481.2357177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ALLCNVEEA_	REV__ENSG00000164190|ENST00000282516|NIPBL;REV__nc|ENSG00000164190|Q6KC79-2|NIPBL;REV__nc|ENSG00000164190|Q6KC79-3|NIPBL;REV__NIPBL|p.F1423Lfs*15|1|0.43|ENSG00000164190|chr5:37008032-37008032|T/-|frameshift_variant;REV__NIPBL|p.I2776Lfs*3|1|0.17|ENSG00000164190|chr5:37064797-37064797|A/-|frameshift_variant;REV__NIPBL|p.K603Sfs*11|2|0.29|ENSG00000164190|chr5:36984981-36984981|A/-|frameshift_variant;REV__NIPBL|p.L2220Ffs*3|1|0.21|ENSG00000164190|chr5:37048567-37048568|-/T|frameshift_variant;REV__NIPBL|p.R45Q|1|0.36|ENSG00000164190|chr5:36955541-36955541|G/A|missense_variant;REV__NIPBL|p.R505Efs*35|1|0.19|ENSG00000164190|chr5:36984687-36984687|A/-|frameshift_variant	58.78195531508484	0.22376836668196862	4				NaN	NaN	0	NaN	12266	4379	16644
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16648	42.418	NaN	2074.4	30	0	145.15	0.106	+			31184	QGNMAVTVTY	10	65	542.2623470492375	NaN	0	542.26171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QGNMAVTVTY_	ENSG00000128591|ENST00000325888|FLNC;FLNC|p.A1081Rfs*17|1|0.11|ENSG00000128591|chr7:128844701-128844701|C/-|frameshift_variant;FLNC|p.H2471Tfs*58|1|0.18|ENSG00000128591|chr7:128856767-128856767|C/-|frameshift_variant;FLNC|p.R1426Gfs*12|1|0.33|ENSG00000128591|chr7:128846887-128846887|G/-|frameshift_variant;FLNC|p.V1896Wfs*57|1|0.04|ENSG00000128591|chr7:128851472-128851472|G/-|frameshift_variant;nc|ENSG00000128591|Q14315-2|FLNC	30.317721548370564	0.4006274431774794	4				NaN	NaN	0	NaN	12267	4379	16644
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16649	42.42	NaN	1407.2	30	0	188.92	0.106	+			35084	SAFQQMWISK	10	66	613.3050059154608	1224.5954588977215	2	613.3056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SAFQQMWISK_	ENST00000491397.1_1_1:104113104-104113248:+|nuORF	48.601550744091256	0.46988609897316763	4				NaN	NaN	0	NaN	12268	4379	16644
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16650	42.421	NaN	1577.1	30	0	166.77	0.038	+			3998	ATCDFPLLNR	10	62	603.798143349921	1205.581733766642	2	603.8004150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_ATC(Carbamidomethyl (C))DFPLLNR_	ENSG00000104142|ENST00000220509|VPS18	58.22992032128504	0.38193887838457763	4				NaN	NaN	0	NaN	12269	4379	16644
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16655	42.436	NaN	3186.6	30	0	340.78	0.143			+	47784	VSICMILLV	9	62	495.78970585023063	989.5648587672613	2	495.7901916503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSICMILLV_	REV__ENSG00000173585|ENST00000357632|CCR9;REV__nc|ENSG00000173585|P51686-2|CCR9	40.5726180659479	0.4135428067754104	4				NaN	NaN	0	NaN	12271	4382	16654
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16660	42.452	NaN	1339.9	30	0	120.58	0.214			+	43833	TLSREDVI	8	54	466.7578792345113	NaN	0	466.28265380859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TLSREDVI_	REV__ENST00000518608.5_1_8:96037415-96056782:+|nuORF;REV__ENST00000520632.5_1_8:96048695-96056782:+|nuORF	51.33545320467046	1.7418937515398478	4				NaN	NaN	0	NaN	12273	4385	16659
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16661	42.456	NaN	1102.5	30	0	91.511	0.035				-1	AILNISKAM	9	65	488.7772887583442	NaN	0	488.7782897949219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_AILNISKAM(Oxidation (M))_	ENSG00000226887|ENST00000443173|ERVMER34-1	34.172542307311794	0.30503706118289736	4				NaN	NaN	0	NaN	12274	4385	16659
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16666	42.47	NaN	2229.3	30	0	430.71	0.214	+			4510	ATKKGTAAPY	10	66	504.27846851835176	1006.5423841035035	2	504.2790222167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATKKGTAAPY_	ENSG00000149043|ENST00000341958|SYT8;ENST00000424556.2_1_11:1856509-1858658:+|nuORF	42.86426827375447	0.522752283233888	4				NaN	NaN	0	NaN	12276	4388	16665
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16667	42.473	NaN	2039	30	0	134.7	0.106	+			42135	SYNGKLYVF	9	67	545.7813734999746	1089.5481940667491	2	545.7827758789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SYNGKLYVF_	ENSG00000174010|ENST00000328046|KLHL15	51.19269402634007	0.2889735674168909	4				NaN	NaN	0	NaN	12277	4388	16665
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16668	42.475	NaN	1669.1	30	0	171.05	0.106			+	23818	LCRGDRQP	8	55	472.73913388122304	943.4637148292461	2	472.7396240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LCRGDRQP_	REV__ENST00000305097.5_1_3:152553477-152553909:+|nuORF	53.351449002276354	0.5676011784961348	4				NaN	NaN	0	NaN	12278	4388	16665
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16669	42.477	NaN	1997.1	30	0	458.96	0.035				-1	 	0	30	336.5337220643007	1006.5793367931021	3	336.8687438964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12279	4388	16665
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16675	42.491	NaN	3026	30	0	339.6	0.214	+			12765	GELKIAYQL	9	67	517.7971718726683	1033.5797908121365	2	517.7974853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GELKIAYQL_	ENSG00000184432|ENST00000333188|COPB2;nc|ENSG00000184432|P35606-2|COPB2	42.33807565288922	0.3928346960664841	4				NaN	NaN	0	NaN	12282	4391	16674
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16676	42.494	NaN	2905.4	30	0	280.77	0.106	+			11919	FVARNGRQF	9	67	547.796872248086	1093.5791915629718	2	547.7984619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FVARNGRQF_	ENSG00000099995|ENST00000215793|SF3A1;nc|ENSG00000099995|Q15459-2|SF3A1;SF3A1|p.R642Afs*5|1|0.33|ENSG00000099995|chr22:30337717-30337717|G/-|frameshift_variant	33.51558372728122	0.4900267029546261	4				NaN	NaN	0	NaN	12283	4391	16674
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16677	42.496	NaN	2183.3	30	0	253.02	0.036	+			8126	DYPSRWTAI	9	62	554.7751406302237	NaN	0	554.7747192382812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DYPSRWTAI_	ENSG00000205339|ENST00000379719|IPO7;IPO7|p.D430Mfs*6|1|0.18|ENSG00000205339|chr11:9425208-9425208|A/-|frameshift_variant;IPO7|p.M511Cfs*3|1|0.19|ENSG00000205339|chr11:9429134-9429134|A/-|frameshift_variant	49.44154591367651	0.21054156626303966	4				NaN	NaN	0	NaN	12284	4391	16674
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16683	42.512	NaN	2086.2	30	0	272.15	0.214	+			38021	SPNAIFKAL	9	58	480.7786345967305	959.542716260261	2	480.77880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SPNAIFKAL_	ENSG00000125398|ENST00000245479|SOX9;SOX9|p.A379Gfs*5|1|0.71|ENSG00000125398|chr17:72123990-72123991|-/GG|frameshift_variant;SOX9|p.D274Wfs*6|1|0.18|ENSG00000125398|chr17:72123673-72123674|-/GT|frameshift_variant;SOX9|p.D290Rfs*6|1|0.39|ENSG00000125398|chr17:72123723-72123724|-/C|frameshift_variant;SOX9|p.E293Qfs*4|1|0.58|ENSG00000125398|chr17:72123728-72123729|-/TCAA|frameshift_variant;SOX9|p.E388*|1|0.21|ENSG00000125398|chr17:72124012-72124054|GAGCAGCGAGCCGGGCCAGTCCCAGCGAACGCACATCAAGACG/-|frameshift_variant;SOX9|p.F423Sfs*47|1|0.36|ENSG00000125398|chr17:72124124-72124124|T/-|frameshift_variant;SOX9|p.G233Afs*20|1|0.34|ENSG00000125398|chr17:72123553-72123553|G/-|frameshift_variant;SOX9|p.G256Rfs*24|1|0.34|ENSG00000125398|chr17:72123617-72123618|-/GA|frameshift_variant;SOX9|p.G390Rfs*14|1|0.67|ENSG00000125398|chr17:72124021-72124022|-/CC|frameshift_variant;SOX9|p.H396Rfs*8|1|0.11|ENSG00000125398|chr17:72124040-72124041|-/CG|frameshift_variant;SOX9|p.H413Lfs*58|1|0.37|ENSG00000125398|chr17:72124094-72124095|-/TG|frameshift_variant;SOX9|p.I435Sfs*35|1|0.25|ENSG00000125398|chr17:72124157-72124157|C/-|frameshift_variant;SOX9|p.P237Tfs*14|1|0.31|ENSG00000125398|chr17:72123564-72123565|CC/-|frameshift_variant;SOX9|p.P258Gfs*23|1|0.62|ENSG00000125398|chr17:72123621-72123622|-/GGGGC|frameshift_variant;SOX9|p.P307Cfs*77|1|0.27|ENSG00000125398|chr17:72123772-72123773|-/GT|frameshift_variant;SOX9|p.P374Rfs*9|1|0.38|ENSG00000125398|chr17:72123974-72123974|C/-|frameshift_variant;SOX9|p.Q416Nfs*54|1|0.48|ENSG00000125398|chr17:72124100-72124100|C/-|frameshift_variant;SOX9|p.R257Afs*39|3|0.16|ENSG00000125398|chr17:72123621-72123622|-/G|frameshift_variant;SOX9|p.R257Gfs*23|1|0.54|ENSG00000125398|chr17:72123621-72123622|-/GG|frameshift_variant;SOX9|p.R264Qfs*32|1|0.69|ENSG00000125398|chr17:72123639-72123640|-/G|frameshift_variant;SOX9|p.S408Tfs*64|1|0.62|ENSG00000125398|chr17:72124072-72124073|-/CACTA|frameshift_variant;SOX9|p.S448*|1|0.34|ENSG00000125398|chr17:72124200-72124201|CC/-|frameshift_variant;SOX9|p.T243Pfs*10|1|0.44|ENSG00000125398|chr17:72123576-72123576|C/-|frameshift_variant;SOX9|p.V291Afs*92|1|0.55|ENSG00000125398|chr17:72123729-72123729|T/-|frameshift_variant;SOX9|p.V306Cfs*77|2|0.32|ENSG00000125398|chr17:72123769-72123769|G/-|frameshift_variant	44.377184641726394	0.36891676396732553	4				NaN	NaN	0	NaN	12287	4394	16682
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16684	42.515	NaN	2046.2	30	0	319.95	0.035	+			2993	ASFDKAKLK	9	60	504.2970246060523	1006.5794962789046	2	504.29736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASFDKAKLK_	ENSG00000034510|ENST00000233143|TMSB10	42.86426827375447	0.38666266728046506	4				NaN	NaN	0	NaN	12288	4394	16682
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16691	42.531	NaN	878.24	30	0	76.855	0.214				-1	 	0	44	347.19822372173473	692.3818945102695	2	347.1987609863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12292	4397	16690
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16692	42.535	NaN	3153.3	30	0	521.1	0.106	+			14926	GTMDMSITRL	10	59	562.7746470113527	1123.5347410895054	2	562.7767333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTMDMSITRL_	ENSG00000153107|ENST00000341068|ANAPC1;ENST00000454465.1_1_2:87355723-87398314:+|nuORF;ENST00000485325.1_1_2:112560984-112579093:-|nuORF	65.15724298150197	0.31893571707528906	4				NaN	NaN	0	NaN	12293	4397	16690
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16693	42.537	NaN	3165.6	30	0	201.92	0.036	+			41402	SVMRLTISY	9	65	535.2884713163639	1068.5623896995278	2	535.2887573242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVMRLTISY_	ENSG00000100644|ENST00000337138|HIF1A;nc|ENSG00000100644|Q16665-2|HIF1A;nc|ENSG00000100644|Q16665-3|HIF1A	80.45461616416974	0.09558281504443908	4				NaN	NaN	0	NaN	12294	4397	16690
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16697	42.55	NaN	3129.1	30	0	227.25	0.213			+	-1	RMASFSPKTSQ	11	71	628.3094582579777	1254.6043635827552	2	628.811279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_RM(Oxidation (M))ASFSPKTSQ_	REV__ENSG00000186648|ENST00000342740|CARMIL3;REV__ENST00000560349.1_1_14:24532322-24538610:+|nuORF;REV__nc|ENSG00000186648|Q8ND23-2|CARMIL3	43.650786325866115	0.5079891456189096	4				NaN	NaN	0	NaN	12295	4400	16696
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16698	42.554	NaN	2400.3	30	0	276.56	0.106			+	18985	IVSRSILAP	9	52	478.2997772414829	954.5850015497658	2	478.300537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IVSRSILAP_	REV__ENSG00000153002|ENST00000282957|CPB1	45.9519527083369	0.35044536499095585	4				NaN	NaN	0	NaN	12296	4400	16696
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16699	42.555	NaN	2893.6	30	0	531.21	0.036				-1	 	0	66	544.2592876793755	1086.5040224255508	2	544.26025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12297	4400	16696
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16703	42.569	NaN	2175.6	30	0	162.82	0.214			+	377	AARRPPGG	8	62	391.2249324252717	780.4353119173434	2	391.2247009277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AARRPPGG_	REV__ENST00000409001.5_1_2:182756891-182760783:+|nuORF	28.2542754592877	0.7411748056684583	4				NaN	NaN	0	NaN	12298	4403	16702
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16704	42.572	NaN	2073.1	30	0	345.59	0.106	+			50225	WNTGVLMF	8	54	484.2394340023692	966.4643150715384	2	484.23956298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WNTGVLMF_	ENSG00000120498|ENST00000374333|TEX11;nc|ENSG00000120498|Q8IYF3-2|TEX11;nc|ENSG00000120498|Q8IYF3|TEX11	44.53106598305862	0.628196326904373	4				NaN	NaN	0	NaN	12299	4403	16702
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16705	42.574	NaN	1848.3	30	0	159.22	0.034	+			31170	QGLAGIFAAL	10	60	480.7786345967305	959.542716260261	2	481.2803039550781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QGLAGIFAAL_	ENSG00000174669|ENST00000357440|SLC29A2;nc|ENSG00000174669|Q14542-3|SLC29A2;nc|ENSG00000174669|Q14542-4|SLC29A2;SLC29A2|p.A177D|1|0.07|ENSG00000174669|chr11:66368557-66368557|G/T|missense_variant	45.9519527083369	0.4943008177357963	4				NaN	NaN	0	NaN	12300	4403	16702
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16709	42.588	NaN	5754.5	30	0	451.63	0.214	+			29278	NYIEKVVAI	9	72	524.8051003763305	1047.595647819461	2	524.8057861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NYIEKVVAI_	ENSG00000136754|ENST00000376140|ABI1;nc|ENSG00000136754|Q8IZP0-10|ABI1;nc|ENSG00000136754|Q8IZP0-11|ABI1;nc|ENSG00000136754|Q8IZP0-12|ABI1;nc|ENSG00000136754|Q8IZP0-2|ABI1;nc|ENSG00000136754|Q8IZP0-3|ABI1;nc|ENSG00000136754|Q8IZP0-4|ABI1;nc|ENSG00000136754|Q8IZP0-5|ABI1;nc|ENSG00000136754|Q8IZP0-6|ABI1;nc|ENSG00000136754|Q8IZP0-7|ABI1;nc|ENSG00000136754|Q8IZP0-8|ABI1;nc|ENSG00000136754|Q8IZP0|ABI1	62.107414245175825	0.1960472003779324	4				NaN	NaN	0	NaN	12301	4406	16708
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16710	42.592	NaN	3089.4	30	0	226.09	0.037	+			45648	TYSPALNKMF	10	71	586.2936702388212	1170.5727875444422	2	586.2946166992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TYSPALNKMF_	ENSG00000141510|ENST00000269305|TP53;ENST00000505014.5_1_17:7578140-7579834:-|nuORF;nc|ENSG00000141510|P04637-2|TP53;nc|ENSG00000141510|P04637-3|TP53;nc|ENSG00000141510|P04637-4|TP53;nc|ENSG00000141510|P04637-5|TP53;nc|ENSG00000141510|P04637-6|TP53;TP53|p.C124G|1|0.84|ENSG00000141510|chr17:7675999-7675999|A/C|missense_variant;TP53|p.C135Y|1|0.64|ENSG00000141510|chr17:7675208-7675208|C/T|missense_variant;TP53|p.C229Yfs*10|1|0.59|ENSG00000141510|chr17:7674276-7674277|AC/-|frameshift_variant;TP53|p.C242Afs*5|1|0.54|ENSG00000141510|chr17:7674240-7674240|G/-|frameshift_variant;TP53|p.E198Gfs*11|1|0.43|ENSG00000141510|chr17:7674938-7674939|-/C|frameshift_variant;TP53|p.E336Sfs*9|1|0.15|ENSG00000141510|chr17:7670704-7670704|A/-|frameshift_variant;TP53|p.G302Rfs*4|1|0.13|ENSG00000141510|chr17:7673717-7673718|-/G|frameshift_variant;TP53|p.H178Tfs*69|1|0.68|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant;TP53|p.I195Nfs*14|1|0.81|ENSG00000141510|chr17:7674947-7674948|-/T|frameshift_variant;TP53|p.P151Rfs*27|1|0.46|ENSG00000141510|chr17:7675153-7675160|GGGCGGGG/-|frameshift_variant;TP53|p.P153Afs*28|1|0.62|ENSG00000141510|chr17:7675156-7675157|-/G|frameshift_variant;TP53|p.P301Qfs*44|1|0.5|ENSG00000141510|chr17:7673718-7673718|G/-|frameshift_variant;TP53|p.P322Hfs*23|1|0.53|ENSG00000141510|chr17:7673563-7673563|G/-|frameshift_variant;TP53|p.Q331Sfs*6|1|0.66|ENSG00000141510|chr17:7673537-7673538|-/A|frameshift_variant;TP53|p.R280Kfs*59|1|0.41|ENSG00000141510|chr17:7673763-7673781|TCCTCTGTGCGCCGGTCTC/-|frameshift_variant;TP53|p.R290Kfs*53|1|0.62|ENSG00000141510|chr17:7673747-7673753|CTTGCGG/-|frameshift_variant;TP53|p.R335Lfs*10|1|0.74|ENSG00000141510|chr17:7670705-7670705|C/-|frameshift_variant	77.31757898189308	0.2175361111083648	4				NaN	NaN	0	NaN	12302	4406	16708
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16714	42.605	NaN	2818.4	30	0	473.09	0.215	+			11066	FESKAALLA	9	53	475.2704488913976	948.5263448495953	2	475.27081298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FESKAALLA_	ENSG00000187266|ENST00000222139|EPOR;ENST00000588681.5_1_19:11493771-11494883:-|nuORF;nc|ENSG00000187266|P19235-2|EPOR;nc|ENSG00000187266|P19235-3|EPOR	37.81151784470057	0.4459294069877048	4				NaN	NaN	0	NaN	12303	4409	16713
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16715	42.609	NaN	2022.9	30	0	203.82	0.038	+			3999	ATCDFPLLNR	10	63	603.798143349921	1205.581733766642	2	603.7980346679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_ATC(Carbamidomethyl (C))DFPLLNR_	ENSG00000104142|ENST00000220509|VPS18	63.53385203322761	0.33370026130094593	4				NaN	NaN	0	NaN	12304	4409	16713
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16720	42.623	NaN	2731.3	30	0	381.24	0.214			+	14734	GTIYGAQQL	9	59	475.75020797522757	949.4858630172552	2	475.7503967285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTIYGAQQL_	REV__ARSG|p.V131I|2|0.19|ENSG00000141337|chr17:68343776-68343776|G/A|missense_variant	56.72105179125745	0.24094814563026265	4				NaN	NaN	0	NaN	12306	4412	16719
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16721	42.627	NaN	2116.3	30	0	381.63	0.106	+			18469	ISFGAFVAK	9	60	470.2678173437263	938.5210817542526	2	470.2684326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ISFGAFVAK_	ENSG00000143384|ENST00000369026|MCL1	84.9155231211612	0.07920012719736333	4				NaN	NaN	0	NaN	12307	4412	16719
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16722	42.629	NaN	1636.5	30	0	216.76	0.106			+	44173	TQTESGPPI	9	54	465.2325130724373	NaN	0	465.23284912109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TQTESGPPI_	REV__ENSG00000124429|ENST00000262753|POF1B;REV__nc|ENSG00000124429|Q8WVV4-1|POF1B	34.172542307311794	0.30503706118289736	4				NaN	NaN	0	NaN	12308	4412	16719
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16723	42.631	NaN	1056.4	30	0	138.66	0.033	+			32654	RAAGPVLPL	9	43	447.2820041367015	NaN	0	447.28179931640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RAAGPVLPL_	ENST00000358625.3_1_9:137023968-137024280:+|nuORF	42.47446043378293	0.25855550551448697	4				NaN	NaN	0	NaN	12309	4412	16719
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16728	42.645	NaN	1980.9	30	0	355.93	0.214				-1	 	0	54	410.7130720181343	819.4115911030686	2	410.7133483886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12311	4415	16727
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16729	42.649	NaN	2090.8	30	0	172.34	0.106				-1	CWALLPPVPC	10	66	578.2865178774313	NaN	0	578.28662109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_CWALLPPVPC(Carbamidomethyl (C))_	ENSG00000088766|ENST00000378863|CRLS1	26.79610172149135	0.4121907004225123	4				NaN	NaN	0	NaN	12312	4415	16727
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16730	42.65	NaN	1568.6	30	0	160.96	0.106	+			9142	EGLSRTVVY	9	58	512.277155731662	1022.539758530124	2	512.27734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EGLSRTVVY_	ENSG00000165219|ENST00000297933|GAPVD1;nc|ENSG00000165219|Q14C86-3|GAPVD1;nc|ENSG00000165219|Q14C86-4|GAPVD1;nc|ENSG00000165219|Q14C86-5|GAPVD1;nc|ENSG00000165219|Q14C86-6|GAPVD1;nc|ENSG00000165219|Q14C86|GAPVD1	35.15202426646627	0.4747332964206883	4				NaN	NaN	0	NaN	12313	4415	16727
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16731	42.652	NaN	1575	30	0	213.85	0.036			+	-1	FASERLGMM	9	59	558.2495170783117	NaN	0	558.2484741210938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term),2 Oxidation (M)	_(Acetyl (Protein N-term))FASERLGM(Oxidation (M))M(Oxidation (M))_	REV__ABCA9|p.F1166Lfs*5|1|0.33|ENSG00000154258|chr17:68995952-68995952|A/-|frameshift_variant;REV__ABCA9|p.L1080*|1|0.43|ENSG00000154258|chr17:69008144-69008144|A/-|frameshift_variant;REV__ABCA9|p.P1249Qfs*18|1|0.17|ENSG00000154258|chr17:68990930-68990930|A/-|frameshift_variant;REV__ENSG00000154258|ENST00000340001|ABCA9;REV__ENST00000461623.1_1_17:67029858-67045457:-|nuORF;REV__nc|ENSG00000154258|Q8IUA7-2|ABCA9;REV__nc|ENSG00000154258|Q8IUA7-3|ABCA9;REV__nc|ENSG00000154258|Q8IUA7-4|ABCA9;REV__nc|ENSG00000154258|Q8IUA7-5|ABCA9	35.200714571348534	0.2998460331538257	4				NaN	NaN	0	NaN	12314	4415	16727
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16737	42.668	NaN	10633	30	0	1959.8	0.214	+			41581	SVQGFFLNH	9	75	524.7630672015032	1047.5115814698063	2	524.7645263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVQGFFLNH_	ENSG00000180011|ENST00000322342|PTGR3;nc|ENSG00000180011|Q8N4Q0-2|PTGR3	101.25262130126117	0.03792372629710479	4				NaN	NaN	0	NaN	12317	4418	16736
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16738	42.672	NaN	2113.7	30	0	604.45	0.106	+			23120	KVVVGIPDF	9	53	487.28919254206727	NaN	0	487.2904968261719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVVVGIPDF_	ENST00000430024.5_1_19:12251056-12253521:-|nuORF	37.15910966729921	0.2899585034171616	4				NaN	NaN	0	NaN	12318	4418	16736
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16739	42.674	NaN	1265.8	30	0	151.78	0.033			+	25619	LQPIISVL	8	50	441.78649075103397	881.558428568868	2	441.78656005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LQPIISVL_	REV__tr|U7T4W4|U7T4W4_FUSNUProteintranslocasesubunitSecYOS=FusobacteriumnucleatumCTI-5OX=1316586GN=secYPE=3SV=1	42.47446043378293	0.6409579893742323	4				NaN	NaN	0	NaN	12319	4418	16736
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16746	42.692	NaN	2588.3	30	0	488.84	0.145			+	10085	ESKLHYLTK	9	51	373.54396962443604	NaN	0	373.54388427734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ESKLHYLTK_	REV__ENSG00000113318|ENST00000265081|MSH3;REV__MSH3|p.N1020Ifs*40|1|0.46|ENSG00000113318|chr5:80864865-80864865|A/-|frameshift_variant;REV__MSH3|p.N1020Kfs*17|1|0.43|ENSG00000113318|chr5:80864864-80864865|-/A|frameshift_variant;REV__MSH3|p.N861Mfs*6|1|0.43|ENSG00000113318|chr5:80792766-80792766|A/-|frameshift_variant;REV__MSH3|p.V745Ifs*28|1|0.05|ENSG00000113318|chr5:80768981-80768982|-/CATATTCGAAGTTTAT|frameshift_variant	37.81151784470057	0.28666463014928195	4				NaN	NaN	0	NaN	12323	4421	16745
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16752	42.708	NaN	4722.6	30	0	591.26	0.214				-1	 	0	72	508.79170883902594	1015.5688647448519	2	508.7922668457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12326	4424	16751
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16753	42.712	NaN	2325.3	30	0	572.66	0.106	+			42271	TACAQPSAII	10	60	487.75157163818096	973.488590343162	2	487.7519226074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TACAQPSAII_	ENSG00000137571|ENST00000260126|SLCO5A1;nc|ENSG00000137571|Q9H2Y9-2|SLCO5A1;nc|ENSG00000137571|Q9H2Y9-3|SLCO5A1	47.95952297671804	0.47580206326914537	4				NaN	NaN	0	NaN	12327	4424	16751
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16754	42.714	NaN	1950.6	30	0	170.47	0.036	+			11031	FEKTLTPII	9	65	531.3154991614239	1060.6164453896477	2	531.316162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FEKTLTPII_	ENSG00000150593|ENST00000280154|PDCD4;ENST00000462577.5_1_10:112645037-112653861:+|nuORF;nc|ENSG00000150593|Q53EL6-2|PDCD4	79.71258880314673	0.09879134589249085	4				NaN	NaN	0	NaN	12328	4424	16751
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16758	42.728	NaN	5821	30	0	280.91	0.214				-1	 	0	83	369.21160892225345	736.4086649113069	2	369.2120361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12329	4427	16757
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16759	42.732	NaN	5386.4	30	0	633.81	0.034				-1	 	0	61	472.2634530314412	942.5123531296824	2	472.2641296386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12330	4427	16757
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16764	42.746	NaN	3664.1	30	0	244.26	0.214	+			3369	ASNWLYLAK	9	65	533.2895431541236	1064.5645333750472	2	533.290771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASNWLYLAK_	ENSG00000162552|ENST00000290167|WNT4	92.23892857375223	0.05855307001735979	4				NaN	NaN	0	NaN	12332	4430	16763
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16765	42.75	NaN	1932.5	30	0	122.58	0.106	+			49812	VYSRYFTTY	9	67	600.2901165959244	1198.5656802586486	2	600.2901611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	79.71258880314673	0.09879134589249085	4				NaN	NaN	0	NaN	12333	4430	16763
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16766	42.752	NaN	1976.8	30	0	99.886	0.106	+			49697	VYKTIMEQF	9	67	579.7961440028394	1157.5777350724786	2	579.7969360351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYKTIMEQF_	BAIAP2|p.D470Ifs*41|1|0.42|ENSG00000175866|chr17:81106809-81106809|C/-|frameshift_variant;ENSG00000175866|ENST00000428708|BAIAP2;ENST00000570913.5_1_17:79009009-79050117:+|nuORF;ENST00000575989.5_1_17:79009009-79027584:+|nuORF;nc|ENSG00000175866|Q9UQB8-3|BAIAP2;nc|ENSG00000175866|Q9UQB8-4|BAIAP2;nc|ENSG00000175866|Q9UQB8-5|BAIAP2;nc|ENSG00000175866|Q9UQB8-6|BAIAP2;nc|ENSG00000175866|Q9UQB8|BAIAP2	78.26377905018397	0.10505600812668463	4				NaN	NaN	0	NaN	12334	4430	16763
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16767	42.753	NaN	1410.6	30	0	107.32	0.106			+	47840	VSLCVPEML	9	48	495.75265328034453	NaN	0	495.7527160644531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSLCVPEML_	REV__ENST00000462723.1_1_7:7678661-7680049:-|nuORF;REV__ENST00000463632.1_1_7:7678661-7680452:-|nuORF	37.15910966729921	0.2899585034171616	4				NaN	NaN	0	NaN	12335	4430	16763
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16768	42.755	NaN	1649.3	30	0	159.42	0.106			+	28578	NKISSNPLG	9	60	465.2576381670787	NaN	0	465.2575988769531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NKISSNPLG_	REV__ENSG00000133640|ENST00000393217|LRRIQ1;REV__nc|ENSG00000133640|Q96JM4-2|LRRIQ1	51.33545320467046	0.19748963086191895	4				NaN	NaN	0	NaN	12336	4430	16763
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16769	42.757	NaN	1550.2	30	0	88.126	0.036	+			35570	SAYEFYHAL	9	63	550.7566528320312	NaN	0	550.7566528320312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SAYEFYHAL_	ENSG00000116016|ENST00000263734|EPAS1	47.91560031466742	0.22105767942158736	4				NaN	NaN	0	NaN	12337	4430	16763
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16774	42.771	NaN	2232.7	30	0	243.81	0.215	+			46291	VEILQHVI	8	61	475.7868920942517	949.5592312553034	2	475.786865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VEILQHVI_	ENSG00000125968|ENST00000376112|ID1;ENSG00000172201|ENST00000378700|ID4;ID1|p.G120Afs*20|1|0.38|ENSG00000125968|chr20:31605737-31605737|C/-|frameshift_variant;nc|ENSG00000125968|P41134-2|ID1	82.24051045832904	0.30490469762271794	4				NaN	NaN	0	NaN	12339	4433	16773
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16775	42.775	NaN	1956.6	30	0	142.56	0.106	+			49707	VYLPNINKI	9	63	537.3203744528527	1072.6261959725052	2	537.3222045898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYLPNINKI_	ENSG00000072422|ENST00000337910|RHOBTB1	51.19269402634007	0.2889735674168909	4				NaN	NaN	0	NaN	12340	4433	16773
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16776	42.777	NaN	2677.6	30	0	324.47	0.106	+			49526	VYAILTHGI	9	62	493.7866222151958	985.5586914971916	2	493.7869873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYAILTHGI_	ENSG00000101911|ENST00000380668|PRPS2;ENSG00000147224|ENST00000372435|PRPS1;ENSG00000229937|ENST00000506618|PRPS1L1;nc|ENSG00000101911|P11908-2|PRPS2;nc|ENSG00000147224|P60891-2|PRPS1;PRPS1|p.T242I|1|0.5|ENSG00000147224|chrX:107647626-107647626|C/T|missense_variant	119.55681237560556	0.021468056596162587	4				NaN	NaN	0	NaN	12341	4433	16773
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16777	42.779	NaN	1126.2	30	0	106.02	0.106			+	17931	IGLAAYVGL	9	48	438.7628916466761	NaN	0	438.762939453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IGLAAYVGL_	REV__ENSG00000108846|ENST00000285238|ABCC3;REV__ENST00000502426.5_1_17:48736553-48755440:+|nuORF;REV__nc|ENSG00000108846|O15438-2|ABCC3;REV__nc|ENSG00000108846|O15438-4|ABCC3	39.021493756699265	0.2805557132942146	4				NaN	NaN	0	NaN	12342	4433	16773
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16778	42.78	NaN	1637.6	30	0	116.5	0.106			+	21876	KRMYEEPTL	9	60	583.796987249343	1165.579421565486	2	583.7974853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KRMYEEPTL_	REV__tr|U7SHY1|U7SHY1_FUSNUP-typeconjugativetransferproteinTrbJOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02195PE=4SV=1	47.657333605630114	0.33044192980041115	4				NaN	NaN	0	NaN	12343	4433	16773
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16779	42.782	NaN	1192.8	30	0	102.38	0.106	+			43198	TEVIFKAL	8	47	460.77606310794204	NaN	0	460.7760314941406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TEVIFKAL_	ENSG00000136816|ENST00000259339|TOR1B;ENST00000486372.1_1_9:132565440-132566668:+|nuORF	45.9519527083369	1.7418937515398478	4				NaN	NaN	0	NaN	12344	4433	16773
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16780	42.784	NaN	1132.9	30	0	116.17	0.034	+			12427	GEARLTFL	8	42	453.75552208684337	NaN	0	453.75579833984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GEARLTFL_	ENSG00000091039|ENST00000261183|OSBPL8;nc|ENSG00000091039|Q9BZF1-2|OSBPL8;nc|ENSG00000091039|Q9BZF1-3|OSBPL8;OSBPL8|p.F644Lfs*25|1|0.34|ENSG00000091039|chr12:76371570-76371570|A/-|frameshift_variant	31.529811441608018	1.7418937515398478	4				NaN	NaN	0	NaN	12345	4433	16773
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16785	42.798	NaN	5819.4	30	0	1442.9	0.214	+			35355	SAPKIFQAL	9	58	487.7868729182405	973.559192903281	2	487.7872619628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAPKIFQAL_	ENSG00000064651|ENST00000262461|SLC12A2;nc|ENSG00000064651|P55011-3|SLC12A2;SLC12A2|p.E1119Rfs*7|1|0.47|ENSG00000064651|chr5:128184417-128184418|-/A|frameshift_variant;SLC12A2|p.P1171Sfs*18|1|0.38|ENSG00000064651|chr5:128186498-128186499|-/TC|frameshift_variant	72.87924865735499	0.12833875048249987	4				NaN	NaN	0	NaN	12347	4436	16784
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16786	42.802	NaN	3719.1	30	0	448.86	0.106	+			49655	VYINTAQEF	9	58	542.7683772703591	1083.5222016075181	2	542.7691650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYINTAQEF_	ENSG00000095059|ENST00000210060|DHPS;ENST00000600510.1_1_19:12786654-12786995:-|nuORF;nc|ENSG00000095059|P49366-3|DHPS	132.757866228626	0.013877640931359021	4				NaN	NaN	0	NaN	12348	4436	16784
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16787	42.804	NaN	5707.3	30	0	642.49	0.106	+			27120	MAPLIRSIL	9	68	507.31280808708976	1012.6110632409795	2	507.3132629394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MAPLIRSIL_	ENSG00000278685|ENST00000615129|IQCA1L	66.42927471994793	0.16001998865088202	4				NaN	NaN	0	NaN	12349	4436	16784
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16788	42.806	NaN	5468	30	0	934.21	0.106	+			29342	NYTNGSFGSNF	11	74	604.2540284891181	1206.4935040450362	2	604.2537231445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NYTNGSFGSNF_	DDX5|p.D572Nfs*6|1|0.04|ENSG00000108654|chr17:64500054-64500055|-/TGACAAGATAGTT|frameshift_variant;ENSG00000108654|ENST00000225792|DDX5;ENST00000581230.5_1_17:62496043-62497015:-|nuORF;nc|ENSG00000108654|P17844-2|DDX5	126.65837966889171	0.007381695019750835	4				NaN	NaN	0	NaN	12350	4436	16784
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16789	42.807	NaN	1106.1	30	0	187.44	0.106	+			19053	IYGSSHSW	8	48	468.7136805625063	NaN	0	468.71343994140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IYGSSHSW_	DUOX1|p.S186N|1|0.29|ENSG00000137857|chr15:45135535-45135535|G/A|missense_variant;ENSG00000137857|ENST00000389037|DUOX1;ENSG00000140279|ENST00000389039|DUOX2;nc|ENSG00000140279|Q9NRD8|DUOX2	52.29916861842294	1.7418937515398478	4				NaN	NaN	0	NaN	12351	4436	16784
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16790	42.809	NaN	1313.8	30	0	142.14	0.034			+	23497	LAGGVAAATLL	11	44	478.7917508037253	955.5689486742506	2	478.7922058105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LAGGVAAATLL_	REV__ENSG00000104870|ENST00000221466|FCGRT;REV__ENST00000595881.1_1_19:50028661-50029373:+|nuORF	27.882242232435846	0.6973292152807183	4				NaN	NaN	0	NaN	12352	4436	16784
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16795	42.824	NaN	3635.8	30	0	1516.4	0.214			+	27193	MEASPRLSK	9	58	509.77098911780405	1017.5274253024081	2	509.7713623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MEASPRLSK_	REV__ENSG00000163867|ENST00000357182|ZMYM6;REV__ENST00000493328.5_1_1:35455862-35480681:-|nuORF;REV__nc|ENSG00000163867|O95789-1|ZMYM6;REV__ZMYM6|p.F804Lfs*6|1|0.38|ENSG00000163867|chr1:34988670-34988670|A/-|frameshift_variant;REV__ZMYM6|p.I637Yfs*14|1|0.36|ENSG00000163867|chr1:35005177-35005177|T/-|frameshift_variant;REV__ZMYM6|p.L686Ifs*41|1|0.03|ENSG00000163867|chr1:34992324-34992325|-/GAAAGGAAAAGAAAAT|frameshift_variant;REV__ZMYM6|p.N1298Ifs*9|1|0.15|ENSG00000163867|chr1:34987189-34987189|T/-|frameshift_variant;REV__ZMYM6|p.N724Mfs*15|1|0.42|ENSG00000163867|chr1:34988911-34988911|T/-|frameshift_variant;REV__ZMYM6|p.T295Nfs*8|1|0.41|ENSG00000163867|chr1:35012493-35012494|-/T|frameshift_variant	37.50817390946774	0.44948750990682723	4				NaN	NaN	0	NaN	12354	4439	16794
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16796	42.827	NaN	2284.6	30	0	500.12	0.106			+	3159	ASILVVHTAP	10	38	336.5343826344445	NaN	0	336.5340270996094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASILVVHTAP_	REV__EIF4A3|p.Q213H|1|0.33|ENSG00000141543|chr17:80139110-80139110|C/A|missense_variant	15.641811463095205	0.4201028297492154	4				NaN	NaN	0	NaN	12355	4439	16794
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16797	42.829	NaN	1469.6	30	0	125.66	0.034	+			11782	FSNGLVTVM	9	54	484.2500489850992	NaN	0	484.2496643066406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FSNGLVTVM_	ENSG00000103091|ENST00000262144|WDR59;ENST00000569549.5_1_16:74943656-74957850:-|nuORF;nc|ENSG00000103091|Q6PJI9-2|WDR59;WDR59|p.L516Yfs*7|1|0.37|ENSG00000103091|chr16:74909598-74909598|G/-|frameshift_variant;WDR59|p.Q401Cfs*32|1|0.19|ENSG00000103091|chr16:74915893-74915894|-/CA|frameshift_variant	39.252832667884924	0.27938773122138094	4				NaN	NaN	0	NaN	12356	4439	16794
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16802	42.843	NaN	2554.7	30	0	357.02	0.214			+	2126	ALIISPNNAL	10	64	513.3025546908029	1024.5905564484058	2	513.3036499023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ALIISPNNAL_	REV__tr|U7SJV0|U7SJV0_FUSNULipoprotein-releasingsystemATP-bindingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02096PE=3SV=1	40.77816245573522	0.5419747034533848	4				NaN	NaN	0	NaN	12358	4442	16801
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16803	42.847	NaN	897.52	30	0	72.455	0.106	+			35221	SALAQAPAPV	10	52	462.759110922894	923.5036689125881	2	462.7599182128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SALAQAPAPV_	ENSG00000173039|ENST00000406246|RELA;ENST00000525693.5_1_11:65421851-65422496:-|nuORF;ENST00000531484.5_1_11:65421851-65429483:-|nuORF;nc|ENSG00000173039|Q04206-2|RELA;nc|ENSG00000173039|Q04206-3|RELA;nc|ENSG00000173039|Q04206-4|RELA;RELA|p.D512Tfs*35|1|0.34|ENSG00000173039|chr11:65654501-65654501|G/-|frameshift_variant;RELA|p.H487Tfs*7|1|0.33|ENSG00000173039|chr11:65654575-65654575|G/-|frameshift_variant;RELA|p.P521Rfs*26|1|0.42|ENSG00000173039|chr11:65654472-65654472|G/-|frameshift_variant	44.116797842482775	0.5112108506279902	4				NaN	NaN	0	NaN	12359	4442	16801
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16804	42.849	NaN	1611.6	30	0	203.98	0.035			+	29974	PPAMVNLFI	9	59	501.2780966594324	NaN	0	501.2784729003906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PPAMVNLFI_	REV__ENSG00000117154|ENST00000251296|IGSF21	42.47446043378293	0.25855550551448697	4				NaN	NaN	0	NaN	12360	4442	16801
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16813	42.879	NaN	2096.7	30	0	205.34	0.214				-1	FLMCIRGF	8	62	522.2608556693106	1042.507158405421	2	522.26220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_FLMC(Carbamidomethyl (C))IRGF_	ZNF624|p.I325Sfs*167|1|0.46|ENSG00000197566|chr17:16623913-16623913|T/-|frameshift_variant	29.841539824830324	0.7289191502596711	4				NaN	NaN	0	NaN	12363	4448	16812
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16814	42.883	NaN	1519.7	30	0	137.35	0.106	+			3056	ASFLLIASK	9	61	475.28875191089736	NaN	0	475.28839111328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASFLLIASK_	DDX60L|p.N1642Mfs*9|1|0.2|ENSG00000181381|chr4:168371615-168371615|T/-|frameshift_variant;ENSG00000181381|ENST00000682922|DDX60L	68.84614121027924	0.11159004992091766	4				NaN	NaN	0	NaN	12364	4448	16812
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16815	42.885	NaN	1502.2	30	0	304.07	0.035			+	21307	KLSSIFGQK	9	56	504.2982249760702	NaN	0	504.2977294921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KLSSIFGQK_	REV__ENSG00000107651|ENST00000369075|SEC23IP;REV__nc|ENSG00000107651|Q9Y6Y8-2|SEC23IP	49.44154591367651	0.21054156626303966	4				NaN	NaN	0	NaN	12365	4448	16812
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16819	42.899	NaN	3293.9	30	0	481.01	0.144	+			45373	TVTEVLLKY	9	67	533.312838412478	1064.6111238917558	2	533.3139038085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVTEVLLKY_	ENSG00000085721|ENST00000198767|RRN3;ENST00000427965.6_1_16:29086353-29124388:+|nuORF;ENST00000551901.5_1_16:21823661-21831677:-|nuORF;ENST00000564580.5_1_16:29086353-29108616:+|nuORF;ENST00000566038.1_1_16:29086353-29102074:+|nuORF;nc|ENSG00000085721|Q9NYV6-2|RRN3;nc|ENSG00000085721|Q9NYV6-3|RRN3;nc|ENSG00000103472|A6NIE6|RRN3P2	85.86182877749512	0.07653218437724067	4				NaN	NaN	0	NaN	12366	4451	16818
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16823	42.915	NaN	1996.6	30	0	78.787	0.214			+	18389	IRHGGKGG	8	50	391.2249324252717	780.4353119173434	2	391.2251281738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IRHGGKGG_	REV__tr|U7T3R4|U7T3R4_FUSNUGlycerolkinaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=glpKPE=3SV=1	14.664097394203935	0.7913966407026132	4				NaN	NaN	0	NaN	12367	4454	16822
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16824	42.918	NaN	2939.7	30	0	239.78	0.035	+			14796	GTLDSVLRY	9	66	512.2755442684705	NaN	0	512.2659912109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTLDSVLRY_	ENSG00000142207|ENST00000382751|URB1	62.107414245175825	0.1403307765918332	4				NaN	NaN	0	NaN	12368	4454	16822
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16828	42.932	NaN	1474.4	30	0	140.05	0.214	+			30356	PVDLKRKIAR	10	54	399.25892501946805	NaN	0	399.2593078613281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PVDLKRKIAR_	ENSG00000133597|ENST00000072869|ADCK2	18.531049691330335	0.4201028297492154	4				NaN	NaN	0	NaN	12369	4457	16827
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16829	42.936	NaN	2165.8	30	0	362.45	0.106				-1	 	0	60	544.2592876793755	1086.5040224255508	2	544.2608642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12370	4457	16827
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16830	42.938	NaN	1581.5	30	0	322.75	0.033			+	13272	GITIIKEL	8	53	443.78355550042943	885.5525580676589	2	443.7843017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GITIIKEL_	REV__ENSG00000166947|ENST00000441366|EPB42;REV__ENST00000567019.1_1_15:43489502-43501706:-|nuORF;REV__EPB42|p.C670Sfs*10|1|0.04|ENSG00000166947|chr15:43197369-43197370|-/TATAAAGG|frameshift_variant;REV__nc|ENSG00000166947|P16452-2|EPB42;REV__nc|ENSG00000166947|P16452-3|EPB42	37.15910966729921	0.6739408393984688	4				NaN	NaN	0	NaN	12371	4457	16827
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16834	42.952	NaN	1104.1	30	0	76.378	0.142			+	45875	VANLVPQLP	9	47	475.7868920942517	949.5592312553034	2	476.2356262207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VANLVPQLP_	REV__ENSG00000145414|ENST00000274054|NAF1;REV__ENST00000502973.1_1_4:164079476-164087879:-|nuORF;REV__ENST00000509232.5_1_4:164057286-164087879:-|nuORF;REV__NAF1|p.D317Kfs*4|1|0.03|ENSG00000145414|chr4:163133238-163133239|-/TATATAAGTTT|frameshift_variant;REV__NAF1|p.P441Hfs*7|1|0.39|ENSG00000145414|chr4:163129060-163129060|G/-|frameshift_variant;REV__NAF1|p.T173Qfs*26|1|0.05|ENSG00000145414|chr4:163164240-163164240|T/-|frameshift_variant;REV__nc|ENSG00000145414|Q96HR8-2|NAF1	31.954861631926434	0.5046124803899898	4				NaN	NaN	0	NaN	12372	4460	16833
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16838	42.968	NaN	1988.9	30	0	163.37	0.214	+			45417	TVVQMLISV	9	60	495.28671298114267	988.5588730290854	2	495.28704833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVVQMLISV_	ENST00000375204.2_1_9:100008408-100054866:+|nuORF;ENST00000375206.6_1_9:100008408-100053768:+|nuORF;ENST00000527128.5_1_9:100008408-100053855:+|nuORF	76.16968421966216	0.11411088698345859	4				NaN	NaN	0	NaN	12373	4463	16837
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16839	42.972	NaN	781.49	30	0	69.726	0.035			+	43399	TGHTLLEQI	9	42	506.2788738369804	NaN	0	506.27911376953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TGHTLLEQI_	REV__ENSG00000121440|ENST00000263666|PDZRN3	21.9598887501803	0.3626577482100488	4				NaN	NaN	0	NaN	12374	4463	16837
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16845	42.988	NaN	2146	30	0	341.98	0.143			+	2325	AMLFHYVI	8	64	497.26581326940504	992.5170736056101	2	497.2658996582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AMLFHYVI_	REV__tr|U7SHY6|U7SHY6_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02200PE=4SV=1	54.89457262308372	0.5523244765420926	4				NaN	NaN	0	NaN	12377	4466	16844
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16851	43.006	NaN	3512.2	30	0	960.73	0.214	+			34919	SAAFPGASL	9	52	410.7131899072502	819.4118268813004	2	410.71343994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAAFPGASL_	ENSG00000183283|ENST00000412716|DAZAP2;nc|ENSG00000183283|Q15038-2|DAZAP2;nc|ENSG00000183283|Q15038-5|DAZAP2	87.75429964447693	0.0711966946989736	4				NaN	NaN	0	NaN	12380	4469	16850
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16852	43.01	NaN	1792.7	30	0	117.34	0.106	+			10798	FAIRRLPL	8	59	493.3182800260458	984.6220071188916	2	493.3177795410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FAIRRLPL_	ENST00000466942.2_1_10:77161749-77161830:+|nuORF	54.76467175910256	0.5536104764165384	4				NaN	NaN	0	NaN	12381	4469	16850
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16853	43.012	NaN	3053.7	30	0	238.53	0.106			+	7618	DKESLLYR	8	67	512.2763671875	NaN	0	512.2763671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DKESLLYR_	REV__ENSG00000101194|ENST00000370351|SLC17A9;REV__nc|ENSG00000101194|Q9BYT1-2|SLC17A9	49.44154591367651	1.7418937515398478	4				NaN	NaN	0	NaN	12382	4469	16850
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16854	43.014	NaN	1588.9	30	0	122.3	0.106			+	6950	CPKFLHTDI	9	59	537.2765655849652	NaN	0	537.2765502929688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_CPKFLHTDI_	REV__ENSG00000139146|ENST00000337682|SINHCAF;REV__nc|ENSG00000139146|Q9NP50-2|SINHCAF	38.753607047826485	0.28190821760017076	4				NaN	NaN	0	NaN	12383	4469	16850
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16855	43.015	NaN	1333.5	30	0	222.78	0.106	+			17392	IAPNGALQL	9	45	448.76297815111514	895.5114033690303	2	448.7628173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IAPNGALQL_	ATF1|p.T261Lfs*2|1|0.16|ENSG00000123268|chr12:50819740-50819740|A/-|frameshift_variant;ENSG00000123268|ENST00000262053|ATF1	63.30626980617807	0.18605348971131092	4				NaN	NaN	0	NaN	12384	4469	16850
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16856	43.017	NaN	1613.5	30	0	322.11	0.106	+			46055	VCGPGACCHRL	11	59	558.2497887753696	NaN	0	558.2473754882812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VCGPGACCHRL_	ENST00000443294.5_1_1:202822362-202830656:-|nuORF	27.882242232435846	0.44115667141176046	4				NaN	NaN	0	NaN	12385	4469	16850
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16857	43.019	NaN	715.64	30	0	80.358	0.037			+	-1	TKRKAKEMQ	9	42	568.3183136811055	NaN	0	568.317626953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_TKRKAKEM(Oxidation (M))Q_	REV__ENSG00000109158|ENST00000264318|GABRA4	31.529811441608018	0.3183796599642538	4				NaN	NaN	0	NaN	12386	4469	16850
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16861	43.033	NaN	2440.1	30	0	475.73	0.214	+			41061	SVIGVFITK	9	59	482.29712861600024	962.5797042988005	2	482.29718017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVIGVFITK_	ENSG00000185052|ENST00000328041|SLC24A3;SLC24A3|p.K341Rfs*11|2|0.31|ENSG00000185052|chr20:19684289-19684289|C/-|frameshift_variant	46.45678178249821	0.34452392205506005	4				NaN	NaN	0	NaN	12387	4472	16860
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16862	43.037	NaN	2944.7	30	0	713.57	0.039			+	10824	FAPFAPWRSLV	11	62	645.8546463349821	1289.6947397367642	2	645.8567504882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FAPFAPWRSLV_	REV__DENND4B|p.P955Lfs*5|1|0.53|ENSG00000198837|chr1:153934212-153934212|G/-|frameshift_variant;REV__DENND4B|p.R1054Dfs*76|3|0.43|ENSG00000198837|chr1:153933653-153933653|G/-|frameshift_variant;REV__ENSG00000198837|ENST00000361217|DENND4B	21.68575002086885	0.7623253651248338	4				NaN	NaN	0	NaN	12388	4472	16860
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16867	43.051	NaN	2160.1	30	0	148.74	0.214	+			45594	TYPAELNNI	9	62	517.7611074540301	1033.5076619748602	2	517.7625122070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TYPAELNNI_	ENSG00000106546|ENST00000242057|AHR	77.31757898189308	0.1091473830098891	4				NaN	NaN	0	NaN	12390	4475	16866
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16868	43.055	NaN	1327.1	30	0	192.19	0.106	+			27894	MTPVLLQYPP	10	47	579.8165893554688	NaN	0	579.8165893554688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MTPVLLQYPP_	ENST00000533077.5_1_11:67051156-67051456:+|nuORF	23.52269567125451	0.42010282974921537	4				NaN	NaN	0	NaN	12391	4475	16866
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16869	43.057	NaN	1066.3	30	0	191.58	0.034			+	-1	CPRAANAK	8	51	465.2329607335823	NaN	0	465.2333068847656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))C(Carbamidomethyl (C))PRAANAK_	REV__ENST00000557986.5_1_15:60685624-60688481:-|nuORF	33.51558372728122	1.7418937515398478	4				NaN	NaN	0	NaN	12392	4475	16866
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16875	43.071	NaN	5138	30	0	239.39	0.215				-1	 	0	70	369.21160892225345	736.4086649113069	2	369.212158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12395	4478	16874
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16876	43.075	NaN	2800.8	30	0	776.48	0.106			+	19086	IYIGRDVD	8	54	475.750299020437	949.486045107674	2	476.25274658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IYIGRDVD_	REV__TBL1XR1|p.C434Y|1|0.23|ENSG00000177565|chr3:177033086-177033086|C/T|missense_variant	50.0245360154114	0.5941082100236891	4				NaN	NaN	0	NaN	12396	4478	16874
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16877	43.077	NaN	3277.2	30	0	484.16	0.033	+			2152	ALLGVIIAK	9	52	449.30978216372347	896.605011394247	2	449.310791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ALLGVIIAK_	ENSG00000113249|ENST00000523175|HAVCR1	88.64286706044652	0.06869153472052109	4				NaN	NaN	0	NaN	12397	4478	16874
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16882	43.091	NaN	5610.9	30	0	1232.4	0.214				-1	 	0	69	512.280137658212	1022.545722383224	2	512.2810668945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12399	4481	16881
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16883	43.095	NaN	2087.2	30	0	320.87	0.106	+			1018	AEKLGFAGL	9	58	453.25758066692816	904.5006084006563	2	453.25860595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEKLGFAGL_	ENSG00000150753|ENST00000280326|CCT5;ENST00000423695.6_1_5:10250480-10261980:+|nuORF;nc|ENSG00000150753|P48643-2|CCT5	93.1432384553994	0.056003526918089595	4				NaN	NaN	0	NaN	12400	4481	16881
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16884	43.096	NaN	3240.4	30	0	293.47	0.106	+			5970	AVLLVFANK	9	59	487.8049139056316	973.5952748780633	2	487.80584716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVLLVFANK_	ENSG00000004059|ENST00000000233|ARF5;ENSG00000134287|ENST00000256682|ARF3;ENSG00000143761|ENST00000272102|ARF1;ENST00000406466.2_1_7:94463564-94463681:+|nuORF;ENST00000444561.2_1_17:43710417-43713807:+|nuORF;ENST00000463733.5_1_7:127230086-127231350:+|nuORF;ENST00000470670.5_1_1:228284963-228285711:+|nuORF;nc|ENSG00000134287|P61204-2|ARF3	96.19043198914106	0.047412499214244314	4				NaN	NaN	0	NaN	12401	4481	16881
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16885	43.098	NaN	1731.5	30	0	152.38	0.106	+			49813	VYSRYFTTY	9	68	600.2901165959244	1198.5656802586486	2	600.2915649414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	44.377184641726394	0.36891676396732553	4				NaN	NaN	0	NaN	12402	4481	16881
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16886	43.1	NaN	1352	30	0	121.01	0.035	+			13676	GPEGLLLPSF	10	50	515.2839349109878	1028.5533168887755	2	515.284912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GPEGLLLPSF_	ENST00000455833.6_2_1:19234750-19235035:-|nuORF	34.172542307311794	0.6007644933930345	4				NaN	NaN	0	NaN	12403	4481	16881
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16891	43.114	NaN	3954.5	30	0	435.27	0.214	+			2142	ALLDGSNVVFK	11	71	581.8266588235587	1161.6387647139172	2	581.8270263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ALLDGSNVVFK_	ENSG00000204220|ENST00000374606|PFDN6;ENST00000395134.3_1_6:33257633-33258228:+|nuORF;ENST00000491382.1_1_6:33257633-33258228:+|nuORF	92.23892857375223	0.08960911027004287	4				NaN	NaN	0	NaN	12405	4484	16890
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16892	43.118	NaN	3538.7	30	0	393.94	0.106			+	-1	GQCILYSNVL	10	73	583.796987249343	1165.579421565486	2	583.7974853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GQC(Carbamidomethyl (C))ILYSNVL_	REV__ENSG00000204033|ENST00000372113|LRIT2;REV__nc|ENSG00000204033|A6NDA9-2|LRIT2	41.42661286455405	0.5359995577334734	4				NaN	NaN	0	NaN	12406	4484	16890
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16893	43.12	NaN	3189.5	30	0	493.84	0.106	+			48086	VSSWLPLAK	9	58	500.79459729096584	999.5746416487317	2	500.7951354980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSSWLPLAK_	ENSG00000103591|ENST00000261880|AAGAB;ENST00000558725.5_1_15:67519241-67546969:-|nuORF	54.776311868738084	0.25715957988447635	4				NaN	NaN	0	NaN	12407	4484	16890
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16894	43.122	NaN	1575.7	30	0	195.38	0.106			+	29739	PHPTVESL	8	53	440.23211669921875	NaN	0	440.23211669921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PHPTVESL_	REV__ENST00000331483.8_1_17:79801637-79801865:-|nuORF	79.9392285194092	1.7418937515398478	4				NaN	NaN	0	NaN	12408	4484	16890
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16895	43.124	NaN	2036.8	30	0	347.99	0.106	+			51112	YMDTSHLF	8	57	507.2238830084915	NaN	0	507.223388671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YMDTSHLF_	ENSG00000117523|ENST00000647382|PRRC2C;nc|ENSG00000117523|Q9Y520-2|PRRC2C;nc|ENSG00000117523|Q9Y520-3|PRRC2C;nc|ENSG00000117523|Q9Y520-4|PRRC2C;nc|ENSG00000117523|Q9Y520-5|PRRC2C;nc|ENSG00000117523|Q9Y520-6|PRRC2C;nc|ENSG00000117523|Q9Y520|PRRC2C;PRRC2C|p.P2791Lfs*5|1|0.1|ENSG00000117523|chr1:171591761-171591761|C/-|frameshift_variant	42.47446043378293	1.7418937515398478	4				NaN	NaN	0	NaN	12409	4484	16890
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16896	43.125	NaN	1056.2	30	0	173.36	0.106	+			4710	ATLTVMVI	8	36	432.2484415231176	862.4823301130352	2	432.24835205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_ATLTVM(Oxidation (M))VI_	DCHS1|p.G2765Rfs*10|1|0.26|ENSG00000166341|chr11:6623383-6623384|-/T|frameshift_variant;DCHS1|p.H2834Sfs*7|1|0.44|ENSG00000166341|chr11:6623177-6623178|-/C|frameshift_variant;ENSG00000166341|ENST00000299441|DCHS1	44.53106598305862	0.628196326904373	4				NaN	NaN	0	NaN	12410	4484	16890
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16897	43.127	NaN	1112.2	30	0	126.26	0.034			+	18949	IVPSAVTTE	9	37	458.7516784667969	NaN	0	458.7516784667969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IVPSAVTTE_	REV__ENSG00000137841|ENST00000260402|PLCB2;REV__ENST00000558588.5_1_15:40583969-40599873:-|nuORF;REV__nc|ENSG00000137841|Q00722-2|PLCB2;REV__nc|ENSG00000137841|Q00722-3|PLCB2;REV__PLCB2|p.F171Sfs*43|1|0.15|ENSG00000137841|chr15:40302027-40302027|A/-|frameshift_variant	50.0245360154114	0.20652386741182333	4				NaN	NaN	0	NaN	12411	4484	16890
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16909	43.173	NaN	2170.4	30	0	220.12	0.214	+			10859	FATTNQISL	9	58	497.7638710597702	993.5131891863405	2	497.7638244628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FATTNQISL_	ENSG00000149600|ENST00000278980|COMMD7;ENST00000610160.1_1_20:31291624-31315937:-|nuORF;nc|ENSG00000149600|Q86VX2-2|COMMD7	75.04331003522576	0.118981335847003	4				NaN	NaN	0	NaN	12414	4493	16908
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16910	43.177	NaN	2005.6	30	0	265.69	0.106	+			2546	AQAQEVFFLK	10	66	590.8217276239425	1179.6289023146849	2	590.8223266601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AQAQEVFFLK_	ENSG00000170248|ENST00000307296|PDCD6IP;ENST00000459659.1_1_3:33863478-33868168:+|nuORF;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP;nc|ENSG00000170248|Q8WUM4-3|PDCD6IP;PDCD6IP|p.F351Nfs*37|1|0.08|ENSG00000170248|chr3:33836259-33836260|-/AATCC|frameshift_variant	89.02883481214508	0.13663399911061233	4				NaN	NaN	0	NaN	12415	4493	16908
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16911	43.178	NaN	1094.2	30	0	150.24	0.034	+			19054	IYGSSHSW	8	52	468.7136805625063	NaN	0	468.7137451171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IYGSSHSW_	DUOX1|p.S186N|1|0.29|ENSG00000137857|chr15:45135535-45135535|G/A|missense_variant;ENSG00000137857|ENST00000389037|DUOX1;ENSG00000140279|ENST00000389039|DUOX2;nc|ENSG00000140279|Q9NRD8|DUOX2	35.200714571348534	1.7418937515398478	4				NaN	NaN	0	NaN	12416	4493	16908
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16915	43.193	NaN	8312.4	30	0	1288.5	0.214	+			23227	KYGPVFTI	8	63	462.76272442520315	923.5108959172063	2	462.76300048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KYGPVFTI_	ENSG00000167600|ENST00000310054|CYP2S1;nc|ENSG00000167600|Q96SQ9-2|CYP2S1	60.97194046774394	0.49215940876911696	4				NaN	NaN	0	NaN	12417	4496	16914
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16916	43.196	NaN	2233.4	30	0	485.37	0.106	+			45116	TVIYDKRL	8	34	336.5343826344445	NaN	0	336.5343322753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVIYDKRL_	tr|U7T1H2|U7T1H2_FUSNUDUF3592domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00643PE=4SV=1	25.450171626174864	1.7418937515398478	4				NaN	NaN	0	NaN	12418	4496	16914
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16917	43.198	NaN	2830.3	30	0	338.39	0.106	+			42458	TAMDVVYALK	10	61	555.796891612524	1109.5792302918478	2	555.7981567382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TAMDVVYALK_	ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2	56.43379154798735	0.3982744522255666	4				NaN	NaN	0	NaN	12419	4496	16914
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16918	43.2	NaN	1888.7	30	0	246.84	0.106	+			2001	AKGYPEPSL	9	61	481.25440057731913	NaN	0	481.25482177734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AKGYPEPSL_	ENST00000381103.6_1_5:61681328-61681442:+|nuORF	49.44154591367651	0.21054156626303966	4				NaN	NaN	0	NaN	12420	4496	16914
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16919	43.202	NaN	2832.2	30	0	441.9	0.106	+			2807	ARVPPTSHVGP	11	57	373.20987667077355	NaN	0	373.2101135253906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ARVPPTSHVGP_	ENSG00000140948|ENST00000671377|ZCCHC14;nc|ENSG00000140948|Q8WYQ9-2|ZCCHC14;nc|ENSG00000140948|Q8WYQ9|ZCCHC14	27.882242232435846	0.44115667141176046	4				NaN	NaN	0	NaN	12421	4496	16914
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16920	43.203	NaN	1159.6	30	0	128.33	0.106	+			37895	SPAAPARR	8	47	413.23699951171875	NaN	0	413.23699951171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SPAAPARR_	ENSG00000105732|ENST00000359044|ZNF574;nc|ENSG00000105732|Q6ZN55-2|ZNF574	31.954861631926434	1.7418937515398478	4				NaN	NaN	0	NaN	12422	4496	16914
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16921	43.205	NaN	1495.3	30	0	365.09	0.036				-1	MQHMAAINAN	10	63	558.7503662109375	NaN	0	558.7503662109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_M(Oxidation (M))QHMAAINAN_	CELF3|p.Q389Rfs*38|1|0.16|ENSG00000159409|chr1:151705927-151705927|G/-|frameshift_variant;ENSG00000159409|ENST00000290583|CELF3;nc|ENSG00000159409|Q5SZQ8-2|CELF3;nc|ENSG00000159409|Q5SZQ8-3|CELF3;nc|ENSG00000159409|Q5SZQ8-4|CELF3	25.57405402267927	0.4162033004763879	4				NaN	NaN	0	NaN	12423	4496	16914
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16927	43.221	NaN	1639.3	30	0	271.6	0.214			+	50478	YAIKANSLK	9	53	504.2974521533356	1006.5803513734712	2	504.2976989746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YAIKANSLK_	REV__GJC1|p.E303K|1|0.38|ENSG00000182963|chr17:44804911-44804911|C/T|missense_variant	52.936696900407355	0.27249468807391813	4				NaN	NaN	0	NaN	12426	4499	16926
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16928	43.225	NaN	1495.1	30	0	175.27	0.037	+			51265	YRGLARTTLS	10	58	569.3200073242188	NaN	0	569.3200073242188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YRGLARTTLS_	ENSG00000131187|ENST00000253496|F12	30.317721548370564	0.4006274431774794	4				NaN	NaN	0	NaN	12427	4499	16926
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16934	43.24	NaN	3006.2	30	0	309.84	0.145	+			51605	YYQSSVQYL	9	68	575.7744490607297	1149.5343451882593	2	576.2783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YYQSSVQYL_	ENSG00000164818|ENST00000297440|DNAAF5;nc|ENSG00000164818|Q86Y56-2|DNAAF5;nc|ENSG00000164818|Q86Y56-3|DNAAF5	104.0567914643314	0.03506238181059741	4				NaN	NaN	0	NaN	12430	4502	16933
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16939	43.256	NaN	1606	30	0	68.88	0.214				-1	 	0	48	391.22494832096294	780.4353437087259	2	391.2254638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12432	4505	16938
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16940	43.26	NaN	2877.9	30	0	535.91	0.036	+			15549	GVFEYFNAK	9	69	537.7667549109539	1073.5189568887076	2	537.7673950195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GVFEYFNAK_	ENSG00000102699|ENST00000381989|PARP4	52.936696900407355	0.27249468807391813	4				NaN	NaN	0	NaN	12433	4505	16938
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16947	43.289	NaN	1895.5	30	0	406.73	0.214	+			47542	VQVNLSLLG	9	49	471.7844022894098	941.5542516456196	2	471.7846984863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VQVNLSLLG_	ENSG00000153820|ENST00000392056|SPHKAP;nc|ENSG00000153820|Q2M3C7-2|SPHKAP;SPHKAP|p.D1487*|1|0.39|ENSG00000153820|chr2:227995684-227995685|-/A|frameshift_variant;SPHKAP|p.S939Pfs*31|1|0.11|ENSG00000153820|chr2:228018039-228018039|A/-|frameshift_variant	39.252832667884924	0.4290233611298554	4				NaN	NaN	0	NaN	12434	4511	16946
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16948	43.293	NaN	1870.9	30	0	264.6	0.039	+			10643	EYPDRIMNTF	10	59	643.2971835621937	1284.5798141911873	2	643.2987060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EYPDRIMNTF_	ENSG00000137267|ENST00000333628|TUBB2A;ENSG00000137285|ENST00000259818|TUBB2B;ENSG00000188229|ENST00000340384|TUBB4B;ENSG00000196230|ENST00000327892|TUBB;ENSG00000258947|ENST00000315491|TUBB3;ENST00000518096.1_1_8:30209523-30210210:+|nuORF;ENST00000604929.1_1_9:140136931-140138005:+|nuORF;nc|ENSG00000258947|Q13509-2|TUBB3;TUBB2B|p.D177Hfs*21|1|0.32|ENSG00000137285|chr6:3225559-3225560|TC/-|frameshift_variant;TUBB2B|p.S168N|1|0.15|ENSG00000137285|chr6:3225586-3225586|C/T|missense_variant	114.8945686534367	0.03454040281423369	4				NaN	NaN	0	NaN	12435	4511	16946
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16952	43.307	NaN	1593.6	30	0	231.92	0.143	+			31458	QKTKLLQQ	8	60	493.8057389486168	NaN	0	493.80609130859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QKTKLLQQ_	DYNC2H1|p.L4021Wfs*5|1|0.3|ENSG00000187240|chr11:103358262-103358262|T/-|frameshift_variant;DYNC2H1|p.P3966Hfs*44|1|0.22|ENSG00000187240|chr11:103321194-103321194|T/-|frameshift_variant;ENSG00000187240|ENST00000375735|DYNC2H1;nc|ENSG00000187240|Q8NCM8-2|DYNC2H1	49.44154591367651	1.7418937515398478	4				NaN	NaN	0	NaN	12436	4514	16951
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16959	43.339	NaN	2496.9	30	0	367.91	0.144	+			6040	AVMGAYVLLK	10	59	532.8118708646855	1063.6091887961709	2	532.813232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVMGAYVLLK_	ENSG00000166562|ENST00000587834|SEC11C;ENST00000591406.1_1_18:56822908-56825914:+|nuORF	94.00642277110589	0.10813630424565351	4				NaN	NaN	0	NaN	12437	4520	16958
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16967	43.371	NaN	2039.4	30	0	370.27	0.215	+			27364	MIYIDLETV	9	58	548.7824636542734	1095.5503743753468	2	548.7831420898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MIYIDLETV_	ENST00000435881.6_1_17:40723892-40724087:+|nuORF	33.51558372728122	0.4900267029546261	4				NaN	NaN	0	NaN	12439	4526	16966
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16968	43.374	NaN	921.48	30	0	109.98	0.032			+	29513	PDPGPGAPL	9	40	410.7131042480469	NaN	0	410.7131042480469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PDPGPGAPL_	REV__ENST00000264088.8_1_19:6436333-6444241:-|nuORF;REV__ENST00000601322.5_2_19:6436333-6444241:-|nuORF	38.80614096846853	0.28164298475537564	4				NaN	NaN	0	NaN	12440	4526	16966
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16972	43.388	NaN	2718.3	30	0	448.3	0.214	+			49690	VYKKEELI	8	63	511.29993506777504	1020.5853172023501	2	511.2997741699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYKKEELI_	tr|U7SM03|U7SM03_FUSNUCupintype-2domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02038PE=4SV=1	42.47446043378293	0.6409579893742323	4				NaN	NaN	0	NaN	12441	4529	16971
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16973	43.392	NaN	2405	30	0	217	0.036				-1	AYPKVQMLM	9	66	548.7824636542734	1095.5503743753468	2	549.2852172851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_AYPKVQMLM(Oxidation (M))_	ENSG00000213996|ENST00000389363|TM6SF2;nc|ENSG00000213996|Q9BZW4-2|TM6SF2	42.47446043378293	0.39123495718708534	4				NaN	NaN	0	NaN	12442	4529	16971
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16978	43.406	NaN	2581.1	30	0	493.55	0.214	+			41292	SVLLPLVAK	9	50	470.31508466975276	938.6156164063055	2	470.3152160644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVLLPLVAK_	ENSG00000140876|ENST00000268533|NUDT7;nc|ENSG00000140876|P0C024-2|NUDT7;nc|ENSG00000140876|P0C024-3|NUDT7	42.396135135203025	0.392153681582562	4				NaN	NaN	0	NaN	12444	4532	16977
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16979	43.41	NaN	1934.2	30	0	144.44	0.106	+			1888	AIMDPLPLR	9	65	513.2940653537042	1024.5735777742084	2	513.7953491210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AIMDPLPLR_	AHR|p.D549Vfs*28|1|0.18|ENSG00000106546|chr7:17339471-17339474|ATTT/-|frameshift_variant;AHR|p.F562Sfs*16|1|0.24|ENSG00000106546|chr7:17339506-17339506|T/-|frameshift_variant;ENSG00000106546|ENST00000242057|AHR	40.77816245573522	0.41113185337114944	4				NaN	NaN	0	NaN	12445	4532	16977
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16980	43.412	NaN	1781.5	30	0	299.41	0.038	+			33362	RHMKTHTSEK	10	70	627.8230241260692	1253.6314953189383	2	627.8233642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RHMKTHTSEK_	CTCFL|p.A642Efs*10|1|0.05|ENSG00000124092|chr20:57498614-57498617|CTGG/-|frameshift_variant;ENSG00000124092|ENST00000243914|CTCFL;nc|ENSG00000124092|Q8NI51-10|CTCFL;nc|ENSG00000124092|Q8NI51-11|CTCFL;nc|ENSG00000124092|Q8NI51-2|CTCFL;nc|ENSG00000124092|Q8NI51-3|CTCFL;nc|ENSG00000124092|Q8NI51-4|CTCFL;nc|ENSG00000124092|Q8NI51-5|CTCFL;nc|ENSG00000124092|Q8NI51-6|CTCFL;nc|ENSG00000124092|Q8NI51-7|CTCFL;nc|ENSG00000124092|Q8NI51-8|CTCFL;nc|ENSG00000124092|Q8NI51-9|CTCFL	61.691277971877994	0.35045824941635534	4				NaN	NaN	0	NaN	12446	4532	16977
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16986	43.428	NaN	3532.9	30	0	245.25	0.214				-1	 	0	69	369.21160892225345	736.4086649113069	2	369.2120056152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12449	4535	16985
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16987	43.432	NaN	1303.8	30	0	76.718	0.034	+			12564	GEGLIIVKM	9	48	480.2832710686613	958.5519892041226	2	480.2834777832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEGLIIVKM_	ENSG00000091428|ENST00000397081|RAPGEF4;nc|ENSG00000091428|Q8WZA2-2|RAPGEF4;nc|ENSG00000091428|Q8WZA2-3|RAPGEF4;nc|ENSG00000091428|Q8WZA2-4|RAPGEF4;nc|ENSG00000091428|Q8WZA2-5|RAPGEF4	62.107414245175825	0.1960472003779324	4				NaN	NaN	0	NaN	12450	4535	16985
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16991	43.446	NaN	1856.1	30	0	180.68	0.214	+			1363	AEVFIVKM	8	56	468.76449857895636	935.5144442247127	2	468.76470947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEVFIVKM_	ENSG00000119707|ENST00000261973|RBM25	55.50420428727701	0.5462892107279674	4				NaN	NaN	0	NaN	12451	4538	16990
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16992	43.449	NaN	1973	30	0	174.27	0.106	+			13016	GEVISYQQL	9	59	518.7689128516128	1035.5232727700254	2	518.7692260742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEVISYQQL_	ENSG00000170430|ENST00000651593|MGMT	54.776311868738084	0.25715957988447635	4				NaN	NaN	0	NaN	12452	4538	16990
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16993	43.451	NaN	1904.1	30	0	177.19	0.038	+			7460	DFSDILLNTY	10	68	600.7926805385014	NaN	0	600.793701171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DFSDILLNTY_	tr|U7SJJ8|U7SJJ8_FUSNUDNA3'-5'helicaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02077PE=3SV=1	44.377184641726394	0.34115073642966565	4				NaN	NaN	0	NaN	12453	4538	16990
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16997	43.465	NaN	2466.4	30	0	341.06	0.214	+			5732	AVFQQLFQK	9	58	554.8110064050859	1107.6074598769717	2	555.3128662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVFQQLFQK_	ENSG00000127831|ENST00000248444|VIL1;nc|ENSG00000127831|P09327-2|VIL1	87.69643885390035	0.07135982304947239	4				NaN	NaN	0	NaN	12454	4541	16996
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16998	43.469	NaN	2097.3	30	0	206.53	0.106	+			33576	RLKLVNASV	9	64	500.31751644961184	NaN	0	500.317626953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RLKLVNASV_	ENSG00000038382|ENST00000344204|TRIO;ENSG00000160145|ENST00000682506|KALRN;ENST00000393501.5_1_3:124103736-124207203:+|nuORF;ENST00000515144.5_1_5:14293150-14488426:+|nuORF;nc|ENSG00000038382|O75962-2|TRIO;nc|ENSG00000038382|O75962-4|TRIO;nc|ENSG00000038382|O75962-5|TRIO;nc|ENSG00000160145|O60229-2|KALRN;nc|ENSG00000160145|O60229|KALRN;TRIO|p.E1028Rfs*29|1|0.41|ENSG00000038382|chr5:14369389-14369389|G/-|frameshift_variant;TRIO|p.K1219Nfs*43|2|0.16|ENSG00000038382|chr5:14387518-14387518|A/-|frameshift_variant;TRIO|p.V2351Cfs*62|3|0.3|ENSG00000038382|chr5:14487672-14487672|C/-|frameshift_variant	45.97224482568171	0.23445038899310136	4				NaN	NaN	0	NaN	12455	4541	16996
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16999	43.471	NaN	907.68	30	0	71.126	0.106				-1	 	0	34	333.2008645409265	664.387176148653	2	333.20123291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12456	4541	16996
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17000	43.473	NaN	2656.7	30	0	196.63	0.106	+			13017	GEVISYQQL	9	68	518.7689128516128	1035.5232727700254	2	518.7702026367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEVISYQQL_	ENSG00000170430|ENST00000651593|MGMT	72.87924865735499	0.12833875048249987	4				NaN	NaN	0	NaN	12457	4541	16996
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17001	43.474	NaN	1330.5	30	0	124.2	0.106	+			29687	PGSPCVAWL	9	56	465.233154296875	NaN	0	465.233154296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PGSPCVAWL_	ENST00000255082.7_1_11:67414468-67414501:-|nuORF	31.954861631926434	0.3162336699109506	4				NaN	NaN	0	NaN	12458	4541	16996
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17002	43.476	NaN	1820.7	30	0	231.44	0.035	+			35326	SANFSYNAL	9	59	493.7330302247518	985.4515075163036	2	493.7326965332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SANFSYNAL_	ENSG00000144589|ENST00000456909|STK11IP;ENST00000475396.5_1_2:220462865-220474366:+|nuORF;STK11IP|p.E522Rfs*80|1|0.11|ENSG00000144589|chr2:219608354-219608354|G/-|frameshift_variant;STK11IP|p.L552Cfs*50|1|0.22|ENSG00000144589|chr2:219608596-219608596|C/-|frameshift_variant	63.53385203322761	0.18415635464017938	4				NaN	NaN	0	NaN	12459	4541	16996
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17007	43.49	NaN	2146	30	0	194.62	0.214	+			5914	AVLDLSWNK	9	59	523.2873780556998	1044.5602031781996	2	523.2879638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVLDLSWNK_	ENSG00000136045|ENST00000412830|PWP1	95.81516180277367	0.04847050768394289	4				NaN	NaN	0	NaN	12461	4544	17006
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17008	43.494	NaN	1380.3	30	0	213.36	0.034				-1	LITMEIVL	8	56	474.27975184402874	NaN	0	474.28076171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LITM(Oxidation (M))EIVL_	ENST00000433473.7_1_1:40539414-40539546:-|nuORF	20.481830146152948	1.741893751539848	4				NaN	NaN	0	NaN	12462	4544	17006
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17019	43.54	NaN	1946	30	0	120.34	0.214				-1	 	0	58	413.2376154998636	824.4606780665272	2	413.23822021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12464	4553	17018
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17020	43.543	NaN	1652	30	0	107.16	0.106	+			19110	IYKSIMEQF	9	67	579.7963920589366	1157.578231184673	2	579.7974243164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IYKSIMEQF_	ENSG00000128298|ENST00000381669|BAIAP2L2;nc|ENSG00000128298|Q6UXY1-2|BAIAP2L2	89.02883481214508	0.06760336634167786	4				NaN	NaN	0	NaN	12465	4553	17018
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17021	43.545	NaN	1738.6	30	0	318.25	0.106			+	33901	RRRQGHKA	8	26	336.86856922262905	NaN	0	336.534912109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RRRQGHKA_	REV__ENST00000590563.1_1_17:42117584-42117671:-|nuORF	12.206847966760668	1.7418937515398478	4				NaN	NaN	0	NaN	12466	4553	17018
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17022	43.547	NaN	1610	30	0	339.56	0.036	+			10069	ESHSGMSGARP	11	60	558.2496685702004	NaN	0	558.25146484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ESHSGMSGARP_	ENST00000476276.5_1_16:2889659-2890331:-|nuORF;ENST00000506153.5_1_16:2889659-2891196:-|nuORF	28.081489160057373	0.4402687122534875	4				NaN	NaN	0	NaN	12467	4553	17018
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17027	43.561	NaN	10654	30	0	1947.4	0.214	+			23977	LDVLFNVAGF	10	71	547.7981644752952	1093.5817760173902	2	547.8006591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LDVLFNVAGF_	ENSG00000164039|ENST00000296424|BDH2;ENST00000492366.5_1_4:104007535-104017411:-|nuORF;nc|ENSG00000164039|Q9BUT1-2|BDH2	63.30626980617807	0.33577009411590547	4				NaN	NaN	0	NaN	12469	4556	17026
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17028	43.565	NaN	2283.2	30	0	233.7	0.106			+	43576	TIESMKRGL	9	58	517.7854405096975	NaN	0	517.7854614257812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TIESMKRGL_	REV__ENSG00000171804|ENST00000447313|WDR87;REV__nc|ENSG00000171804|Q6ZQQ6-2|WDR87;REV__nc|ENSG00000171804|Q6ZQQ6|WDR87;REV__WDR87|p.A2794Pfs*4|1|0.26|ENSG00000171804|chr19:37885175-37885175|T/-|frameshift_variant;REV__WDR87|p.K2720Rfs*57|5|0.35|ENSG00000171804|chr19:37885395-37885395|T/-|frameshift_variant;REV__WDR87|p.Q1927Tfs*32|1|0.44|ENSG00000171804|chr19:37887775-37887776|-/T|frameshift_variant;REV__WDR87|p.R2063Gfs*11|1|0.12|ENSG00000171804|chr19:37887367-37887367|T/-|frameshift_variant;REV__WDR87|p.R2063Kfs*25|1|0.32|ENSG00000171804|chr19:37887366-37887367|-/T|frameshift_variant	21.9598887501803	0.3626577482100488	4				NaN	NaN	0	NaN	12470	4556	17026
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17029	43.567	NaN	1066.7	30	0	174.95	0.106	+			10588	EYKKAKLQ	8	47	504.2974521533356	1006.5803513734712	2	504.299072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EYKKAKLQ_	tr|U7SGL3|U7SGL3_FUSNUOutermembraneeffluxproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02229PE=3SV=1	21.9598887501803	0.7897753010812679	4				NaN	NaN	0	NaN	12471	4556	17026
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17030	43.569	NaN	2312.6	30	0	230.13	0.106	+			47737	VSGILDREK	9	63	508.7921812458149	NaN	0	508.792236328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSGILDREK_	ENSG00000196159|ENST00000394329|FAT4;FAT4|p.D3606Sfs*31|1|0.07|ENSG00000196159|chr4:125451831-125451832|-/AGTAAAGG|frameshift_variant;FAT4|p.E3388Gfs*4|1|0.35|ENSG00000196159|chr4:125451179-125451179|A/-|frameshift_variant;FAT4|p.E4539Rfs*31|1|0.12|ENSG00000196159|chr4:125490431-125490431|C/-|frameshift_variant;FAT4|p.K4477Rfs*15|1|0.36|ENSG00000196159|chr4:125490247-125490247|G/-|frameshift_variant;FAT4|p.K4532Efs*21|1|0.37|ENSG00000196159|chr4:125490410-125490411|-/G|frameshift_variant;FAT4|p.K4532Rfs*38|1|0.19|ENSG00000196159|chr4:125490411-125490411|G/-|frameshift_variant;FAT4|p.L3734Ffs*22|1|0.27|ENSG00000196159|chr4:125452211-125452212|-/T|frameshift_variant;FAT4|p.L3734Yfs*8|2|0.3|ENSG00000196159|chr4:125452212-125452212|T/-|frameshift_variant;FAT4|p.Q4906Rfs*14|1|0.49|ENSG00000196159|chr4:125491536-125491536|C/-|frameshift_variant;FAT4|p.T3555Pfs*6|1|0.21|ENSG00000196159|chr4:125451679-125451679|A/-|frameshift_variant;nc|ENSG00000196159|Q6V0I7-2|FAT4;nc|ENSG00000196159|Q6V0I7-3|FAT4;nc|ENSG00000196159|Q6V0I7|FAT4	63.53385203322761	0.134247007536971	4				NaN	NaN	0	NaN	12472	4556	17026
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17031	43.57	NaN	1292.1	30	0	190.99	0.034			+	26927	LYGCHRGM	8	46	468.7137878394089	NaN	0	468.71453857421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LYGCHRGM_	REV__ENSG00000067057|ENST00000381125|PFKP;REV__ENSG00000141959|ENST00000349048|PFKL;REV__ENSG00000152556|ENST00000359794|PFKM;REV__ENST00000397961.6_1_21:45725201-45746742:+|nuORF;REV__ENST00000466134.5_1_21:45719988-45734072:+|nuORF;REV__ENST00000546964.5_1_12:48513149-48528944:+|nuORF;REV__nc|ENSG00000067057|Q01813-2|PFKP;REV__nc|ENSG00000141959|P17858-2|PFKL;REV__nc|ENSG00000152556|P08237-2|PFKM;REV__nc|ENSG00000152556|P08237-3|PFKM;REV__PFKL|p.P704Qfs*6|1|0.29|ENSG00000141959|chr21:44326177-44326177|C/-|frameshift_variant;REV__PFKM|p.A266Efs*59|1|0.04|ENSG00000152556|chr12:48134991-48134992|-/AGGGATTT|frameshift_variant;REV__PFKP|p.R265Gfs*2|3|0.32|ENSG00000067057|chr10:3107226-3107226|A/-|frameshift_variant	37.028477286268924	1.7418937515398478	4				NaN	NaN	0	NaN	12473	4556	17026
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17036	43.585	NaN	874.25	30	0	148.47	0.214			+	27448	MLLAGWAW	8	41	474.2450798804633	NaN	0	474.244384765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MLLAGWAW_	REV__ENST00000414276.6_1_1:150238377-150238533:-|nuORF	43.626045697637714	1.7418937515398478	4				NaN	NaN	0	NaN	12475	4559	17035
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17037	43.588	NaN	2468.9	30	0	562.29	0.037			+	50195	WLRLAQYPA	9	39	373.2095060264844	1116.6066886796532	3	373.2100524902344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WLRLAQYPA_	REV__ENSG00000167780|ENST00000301466|SOAT2;REV__nc|ENSG00000167780|O75908-2|SOAT2;REV__nc|ENSG00000167780|O75908-3|SOAT2;REV__nc|ENSG00000167780|O75908-4|SOAT2;REV__SOAT2|p.V421Gfs*15|1|0.13|ENSG00000167780|chr12:53123101-53123102|-/G|frameshift_variant	19.359975847455235	0.6112419832031293	4				NaN	NaN	0	NaN	12476	4559	17035
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17042	43.603	NaN	4250.7	30	0	234.38	0.14	+			13145	GGPARARP	8	71	391.22494832096294	780.4353437087259	2	391.2247314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GGPARARP_	ENST00000375190.8_1_19:3606541-3606769:-|nuORF	26.79610172149135	0.7524337208463756	4				NaN	NaN	0	NaN	12478	4562	17041
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17046	43.619	NaN	2436.9	30	0	272.49	0.214	+			42153	SYSMIVNNL	9	64	528.7540957344901	1055.49363853578	2	528.7553100585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_SYSM(Oxidation (M))IVNNL_	CACYBP|p.V145Sfs*22|1|0.25|ENSG00000116161|chr1:175007191-175007191|A/-|frameshift_variant;ENSG00000116161|ENST00000367679|CACYBP;ENST00000469173.1_1_1:174976108-174977843:+|nuORF;ENST00000473925.1_1_1:174969094-174977843:+|nuORF;nc|ENSG00000116161|Q9HB71-3|CACYBP	66.42927471994793	0.16001998865088202	4				NaN	NaN	0	NaN	12479	4565	17045
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17047	43.622	NaN	1562.4	30	0	115.46	0.106			+	8101	DYENVAKKI	9	56	540.2889709208162	1078.5633889084322	2	540.2901000976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DYENVAKKI_	REV__ENSG00000196659|ENST00000408939|TTC30B;REV__ENSG00000197557|ENST00000355689|TTC30A	69.6276240434122	0.14239879520340665	4				NaN	NaN	0	NaN	12480	4565	17045
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17048	43.624	NaN	1111.3	30	0	131.27	0.106	+			23910	LDLGVTLR	8	45	443.7711736682025	NaN	0	443.7719421386719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LDLGVTLR_	ENSG00000167100|ENST00000330175|SAMD14;ENST00000508892.5_1_17:48190259-48195083:-|nuORF;nc|ENSG00000167100|Q8IZD0-2|SAMD14;SAMD14|p.S286Afs*67|1|0.49|ENSG00000167100|chr17:50114274-50114274|G/-|frameshift_variant	40.77816245573522	1.7418937515398478	4				NaN	NaN	0	NaN	12481	4565	17045
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17049	43.626	NaN	1335.2	30	0	214.92	0.106	+			25190	LMDLFSVK	8	53	476.7624281855251	NaN	0	476.7624816894531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LMDLFSVK_	COL22A1|p.I680Nfs*21|1|0.2|ENSG00000169436|chr8:138751504-138751505|-/T|frameshift_variant;COL22A1|p.L1298Ffs*130|1|0.28|ENSG00000169436|chr8:138616034-138616034|C/-|frameshift_variant;ENSG00000169436|ENST00000303045|COL22A1;nc|ENSG00000169436|Q8NFW1-2|COL22A1;nc|ENSG00000169436|Q8NFW1-3|COL22A1	63.30626980617807	1.7418937515398478	4				NaN	NaN	0	NaN	12482	4565	17045
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17050	43.628	NaN	1639.8	30	0	85.544	0.035	+			29188	NVKGTQIGAY	10	60	525.7821160190698	1049.5496791049395	2	525.7805786132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NVKGTQIGAY_	ENSG00000169896|ENST00000544665|ITGAM;ITGAM|p.H481Ifs*44|1|0.12|ENSG00000169896|chr16:31297593-31297593|C/-|frameshift_variant;nc|ENSG00000169896|P11215-2|ITGAM	36.446750945000026	0.5818864909973037	4				NaN	NaN	0	NaN	12483	4565	17045
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17054	43.642	NaN	3067.5	30	0	2198.9	0.214				-1	 	0	40	346.7062750762767	691.3979972193534	2	346.70654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12484	4568	17053
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17055	43.646	NaN	1650.1	30	0	135.4	0.106	+			10372	EVAASLLCSVL	11	67	552.803466796875	NaN	0	552.803466796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EVAASLLCSVL_	ENST00000337774.9_2_3:187003724-187009559:-|nuORF	43.650786325866115	0.3609211547700893	4				NaN	NaN	0	NaN	12485	4568	17053
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17056	43.647	NaN	2268.2	30	0	778.53	0.037			+	19780	KEAINEATIGM	11	59	588.7996243926945	1175.5846958521888	2	588.7994384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEAINEATIGM_	REV__tr|U7SGB4|U7SGB4_FUSNUAcetyl-CoAC-acetyltransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02245PE=3SV=1	32.75053402867276	0.6462648045997152	4				NaN	NaN	0	NaN	12486	4568	17053
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17062	43.662	NaN	1295.4	30	0	206.03	0.138	+			1982	AKAKGSGG	8	41	338.1930210359496	674.3714891386992	2	338.1935119628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AKAKGSGG_	ENSG00000166405|ENST00000309737|RIC3;ENST00000529035.1_1_11:8157336-8161717:-|nuORF;nc|ENSG00000166405|Q7Z5B4-2|RIC3;nc|ENSG00000166405|Q7Z5B4-5|RIC3;nc|ENSG00000166405|Q7Z5B4-6|RIC3	12.959181472943097	0.7887000251064199	4				NaN	NaN	0	NaN	12489	4571	17061
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17071	43.694	NaN	3189.8	30	0	402.51	0.214				-1	 	0	68	518.7866645603726	1035.5587761875452	2	518.7877197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12492	4577	17070
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17072	43.698	NaN	1454.3	30	0	103.8	0.106			+	10883	FCFRKQIN	8	63	528.2786448389668	1054.5427367447335	2	528.2808227539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FCFRKQIN_	REV__ENSG00000073910|ENST00000542859|FRY	54.76467175910256	0.5536104764165384	4				NaN	NaN	0	NaN	12493	4577	17070
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17073	43.7	NaN	2319.7	30	0	251.87	0.034				-1	 	0	59	482.2966226649851	962.5786923967702	2	482.2965087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12494	4577	17070
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17079	43.714	NaN	3054.8	30	0	353.33	0.214	+			7967	DSTFNVFVGK	10	69	557.2819047837845	1112.549256634369	2	557.7841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DSTFNVFVGK_	ENSG00000122642|ENST00000242209|FKBP9;ENST00000494374.5_1_7:32997059-33028356:+|nuORF;FKBP9|p.N129Ifs*10|7|0.31|ENSG00000122642|chr7:32975192-32975192|C/-|frameshift_variant;FKBP9|p.P380Lfs*6|1|0.38|ENSG00000122642|chr7:32996258-32996258|C/-|frameshift_variant;nc|ENSG00000122642|O95302-3|FKBP9	109.82975700811294	0.04850514657194457	4				NaN	NaN	0	NaN	12497	4580	17078
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17080	43.718	NaN	1529.8	30	0	200.62	0.106	+			29709	PHFLYNTL	8	52	502.76309059453394	1003.5116282558679	2	502.7637634277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PHFLYNTL_	tr|U7T2T8|U7T2T8_FUSNUTwo-componentsystem,sensorhistidinekinaseYesMOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00411PE=4SV=1	55.50420428727701	0.5462892107279674	4				NaN	NaN	0	NaN	12498	4580	17078
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17081	43.72	NaN	1577.6	30	0	439.47	0.106			+	29003	NSNKILNNK	9	62	522.7947257336763	1043.5748985341525	2	522.7949829101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NSNKILNNK_	REV__tr|U7SUA6|U7SUA6_FUSNUMethyltransferasedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01360PE=4SV=1	45.97224482568171	0.3502073465782774	4				NaN	NaN	0	NaN	12499	4580	17078
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17082	43.722	NaN	1475.1	30	0	163.37	0.035	+			50206	WLVGRRGF	8	58	495.78411992761505	NaN	0	495.7849426269531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_WLVGRRGF_	ENSG00000132518|ENST00000254854|GUCY2D;ENST00000574510.1_1_17:7919510-7919845:+|nuORF	35.200714571348534	1.7418937515398478	4				NaN	NaN	0	NaN	12500	4580	17078
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17090	43.752	NaN	1430.1	30	0	430.89	0.14			+	33277	RGKGRGPA	8	38	399.73813558472574	NaN	0	399.73828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RGKGRGPA_	REV__ENST00000574268.1_1_17:4710512-4711565:+|nuORF	1.46482723592726	1.7418937515398478	4				NaN	NaN	0	NaN	12502	4586	17089
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17094	43.768	NaN	1148.4	30	0	77.115	0.214	+			7592	DIRTLVAL	8	51	450.779175106885	NaN	0	450.7792053222656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DIRTLVAL_	tr|U7T1X6|U7T1X6_FUSNUUDP-N-acetylglucosamine1-carboxyvinyltransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=murAPE=3SV=1	44.116797842482775	1.7418937515398478	4				NaN	NaN	0	NaN	12503	4589	17093
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17095	43.771	NaN	1648.6	30	0	108.58	0.106	+			26660	LVEVVVPTGA	10	54	492.29189889249835	982.5692448517967	2	492.29180908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LVEVVVPTGA_	ENSG00000144115|ENST00000674334|THNSL2;ENST00000476349.1_1_2:88478486-88482640:+|nuORF;nc|ENSG00000144115|Q86YJ6-2|THNSL2;nc|ENSG00000144115|Q86YJ6-3|THNSL2;nc|ENSG00000144115|Q86YJ6-5|THNSL2	49.44154591367651	0.46214596422418036	4				NaN	NaN	0	NaN	12504	4589	17093
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17096	43.773	NaN	1377.5	30	0	205.1	0.035			+	9131	EGLLLSHLQ	9	52	505.2888442885942	NaN	0	505.28912353515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EGLLLSHLQ_	REV__ENST00000586118.5_1_18:47802317-47803521:-|nuORF	30.503639358989545	0.3235605894931338	4				NaN	NaN	0	NaN	12505	4589	17093
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17102	43.789	NaN	1787.4	30	0	182.66	0.145	+			49817	VYSRYFTTY	9	71	600.2907125998155	NaN	0	600.2908325195312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	65.46538089061403	0.1260090208616529	4				NaN	NaN	0	NaN	12508	4592	17101
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17106	43.805	NaN	1088.1	30	0	110.05	0.215				-1	 	0	39	333.2008645409265	664.387176148653	2	333.2015380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12509	4595	17105
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17107	43.809	NaN	3361.3	30	0	336.82	0.106			+	26768	LVQFQIVLE	9	74	544.8208400055969	1087.6271270779937	2	544.822021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LVQFQIVLE_	REV__ENSG00000161996|ENST00000293879|WDR90;REV__ENST00000547407.5_1_16:712941-717586:+|nuORF;REV__ENST00000549024.5_1_16:711101-717586:+|nuORF;REV__ENST00000553080.1_1_16:715570-716730:+|nuORF;REV__nc|ENSG00000161996|Q96KV7-10|WDR90;REV__nc|ENSG00000161996|Q96KV7-7|WDR90	60.97194046774394	0.20551255781574032	4				NaN	NaN	0	NaN	12510	4595	17105
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17108	43.811	NaN	1219.7	30	0	69.894	0.038	+			21931	KRYLEMLLE	9	58	597.8323364257812	NaN	0	597.8323364257812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KRYLEMLLE_	ENSG00000183431|ENST00000373019|SF3A3;ENST00000446317.1_1_20:3471092-3471287:-|nuORF;ENST00000470585.5_1_1:38445118-38455637:-|nuORF	26.69291269510374	0.34280015626154364	4				NaN	NaN	0	NaN	12511	4595	17105
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17112	43.825	NaN	1992	30	0	209.62	0.144	+			19132	IYNASATSVF	10	71	536.7684228364832	1071.5222927397663	2	537.2716064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IYNASATSVF_	ENSG00000127980|ENST00000248633|PEX1;ENST00000484913.5_1_7:92116773-92148321:-|nuORF;PEX1|p.R636Gfs*9|1|0.3|ENSG00000127980|chr7:92504897-92504897|T/-|frameshift_variant	69.6276240434122	0.2803623802747859	4				NaN	NaN	0	NaN	12512	4598	17111
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17116	43.841	NaN	1902.8	30	0	159.42	0.214	+			47207	VMAPRTLLL	9	56	507.31181445918077	1012.6090759851616	2	507.3129577636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VMAPRTLLL_	ENSG00000206503|ENST00000376809|HLA-A;ENST00000463348.5_1_6:30227401-30227711:+|nuORF;ENST00000495183.5_1_6:29910330-29910808:+|nuORF;ENST00000496081.5_1_6:29910330-29912419:+|nuORF;nc|ENSG00000206503|P04439-2|HLA-A	47.657333605630114	0.33044192980041115	4				NaN	NaN	0	NaN	12513	4601	17115
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17117	43.845	NaN	2799.4	30	0	513.27	0.106				-1	 	0	65	569.7792406039423	1137.5439282746845	2	569.7803344726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12514	4601	17115
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17118	43.847	NaN	2837.3	30	0	762.68	0.106				-1	 	0	47	373.04272106671306	2232.2126676006783	6	373.2095947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12515	4601	17115
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17119	43.848	NaN	1143.1	30	0	138.97	0.031				-1	RNCDEHEA	8	48	344.1402400322414	NaN	0	344.1399841308594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_RNC(Carbamidomethyl (C))DEHEA_	sp|F5HC79|TRM1_HCMVMTripartiteterminasesubunit1OS=Humancytomegalovirus(strainMerlin)OX=295027GN=TRM1PE=3SV=1;sp|P16724|TRM1_HCMVATripartiteterminasesubunit1OS=Humancytomegalovirus(strainAD169)OX=10360GN=TRM1PE=3SV=1	37.15910966729921	1.7418937515398478	4				NaN	NaN	0	NaN	12516	4601	17115
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17123	43.862	NaN	3255.7	30	0	560.65	0.214	+			49402	VVTGVSVAF	9	50	439.7522589163755	877.4899648995511	2	439.75262451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVTGVSVAF_	ENSG00000105609|ENST00000449561|LILRB5;nc|ENSG00000105609|O75023-2|LILRB5;nc|ENSG00000105609|O75023|LILRB5	65.80317337860623	0.1652391959156183	4				NaN	NaN	0	NaN	12517	4604	17122
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17124	43.866	NaN	774.78	30	0	86.43	0.033				-1	 	0	43	424.7466543486939	847.4787557641878	2	425.24859619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12518	4604	17122
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17133	43.886	NaN	2753.3	30	0	285.01	0.214				-1	 	0	54	464.29667695433756	463.28940048773757	1	464.29705810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12524	4607	17132
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17134	43.89	NaN	1600.5	30	0	81.767	0.106				-1	 	0	55	413.2376154998636	824.4606780665272	2	413.2377624511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12525	4607	17132
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17135	43.891	NaN	2486.6	30	0	671.93	0.106				-1	 	0	37	336.5338523513709	1006.5797276543128	3	336.53448486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12526	4607	17132
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17136	43.893	NaN	1193.5	30	0	101.55	0.106	+			10872	FAVLRGAVL	9	54	473.29705843559924	NaN	0	473.2972717285156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FAVLRGAVL_	ENSG00000172830|ENST00000308127|SSH3;nc|ENSG00000172830|Q8TE77-2|SSH3;nc|ENSG00000172830|Q8TE77-4|SSH3;SSH3|p.E492*|1|0.12|ENSG00000172830|chr11:67310124-67310125|-/C|frameshift_variant;SSH3|p.H335Tfs*25|1|0.12|ENSG00000172830|chr11:67308287-67308287|C/-|frameshift_variant	44.116797842482775	0.2472372736944149	4				NaN	NaN	0	NaN	12527	4607	17132
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17137	43.895	NaN	1040.4	30	0	104.62	0.106	+			6843	CINEGVKPASF	11	67	582.7886025172618	1163.5626521013235	2	582.7896728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_CINEGVKPASF_	nc|ENSG00000060237|Q9H4A3-4|WNK1	30.568863376406313	0.6691487505135859	4				NaN	NaN	0	NaN	12528	4607	17132
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17138	43.897	NaN	934.8	30	0	178.36	0.106	+			28189	NARKLERDSLR	11	43	453.259521484375	NaN	0	453.259521484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NARKLERDSLR_	ENSG00000180329|ENST00000315286|CCDC43	30.568863376406313	0.42918353898720446	4				NaN	NaN	0	NaN	12529	4607	17132
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17139	43.899	NaN	1207.9	30	0	170.4	0.037	+			18904	IVLVENFYK	9	60	562.8211501703063	NaN	0	562.7742919921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IVLVENFYK_	ENSG00000188643|ENST00000368706|S100A16;ENST00000474991.1_1_1:153580188-153585458:-|nuORF	66.42927471994793	0.121898005645852	4				NaN	NaN	0	NaN	12530	4607	17132
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17143	43.913	NaN	2781.1	30	0	357.5	0.214	+			11758	FSISSWIIAA	10	70	547.7981644752952	1093.5817760173902	2	547.7999267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FSISSWIIAA_	ENSG00000105642|ENST00000684775|KCNN1;nc|ENSG00000105642|Q92952-2|KCNN1	37.15910966729921	0.575322462179216	4				NaN	NaN	0	NaN	12531	4610	17142
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17144	43.916	NaN	1739.1	30	0	166.62	0.106	+			50749	YEKILVAL	8	58	474.7913284565778	947.5681039799556	2	474.7910461425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YEKILVAL_	ENSG00000135046|ENST00000257497|ANXA1;ENST00000491192.1_1_9:75783887-75785020:+|nuORF	51.33545320467046	0.5859736979383976	4				NaN	NaN	0	NaN	12532	4610	17142
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17145	43.918	NaN	1308.9	30	0	162.34	0.106			+	26928	LYGCHRGM	8	51	468.7137878394089	NaN	0	468.7138977050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LYGCHRGM_	REV__ENSG00000067057|ENST00000381125|PFKP;REV__ENSG00000141959|ENST00000349048|PFKL;REV__ENSG00000152556|ENST00000359794|PFKM;REV__ENST00000397961.6_1_21:45725201-45746742:+|nuORF;REV__ENST00000466134.5_1_21:45719988-45734072:+|nuORF;REV__ENST00000546964.5_1_12:48513149-48528944:+|nuORF;REV__nc|ENSG00000067057|Q01813-2|PFKP;REV__nc|ENSG00000141959|P17858-2|PFKL;REV__nc|ENSG00000152556|P08237-2|PFKM;REV__nc|ENSG00000152556|P08237-3|PFKM;REV__PFKL|p.P704Qfs*6|1|0.29|ENSG00000141959|chr21:44326177-44326177|C/-|frameshift_variant;REV__PFKM|p.A266Efs*59|1|0.04|ENSG00000152556|chr12:48134991-48134992|-/AGGGATTT|frameshift_variant;REV__PFKP|p.R265Gfs*2|3|0.32|ENSG00000067057|chr10:3107226-3107226|A/-|frameshift_variant	37.028477286268924	1.7418937515398478	4				NaN	NaN	0	NaN	12533	4610	17142
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17146	43.92	NaN	1355.2	30	0	306.48	0.106			+	42564	TASGIHPLIV	10	52	504.2974521533356	1006.5803513734712	2	504.29815673828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TASGIHPLIV_	REV__ENSG00000137106|ENST00000318158|GRHPR;REV__ENST00000460882.5_1_9:37422710-37436776:+|nuORF;REV__ENST00000480596.5_1_9:37429643-37436776:+|nuORF;REV__ENST00000497693.1_1_9:37431939-37436776:+|nuORF	30.503639358989545	0.6307262373768582	4				NaN	NaN	0	NaN	12534	4610	17142
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17147	43.922	NaN	1665.5	30	0	178.09	0.106	+			19203	IYYVDVQKF	9	61	587.810348102601	1173.6061432720019	2	588.3118286132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IYYVDVQKF_	ENSG00000160410|ENST00000291842|SHKBP1;SHKBP1|p.S624Ifs*31|1|0.32|ENSG00000160410|chr19:40590830-40590831|-/A|frameshift_variant	72.87924865735499	0.12833875048249987	4				NaN	NaN	0	NaN	12535	4610	17142
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17148	43.924	NaN	1236.8	30	0	65.577	0.037	+			18905	IVLVENFYK	9	60	562.8211501703063	NaN	0	562.822021484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IVLVENFYK_	ENSG00000188643|ENST00000368706|S100A16;ENST00000474991.1_1_1:153580188-153585458:-|nuORF	49.44154591367651	0.21054156626303966	4				NaN	NaN	0	NaN	12536	4610	17142
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17153	43.938	NaN	4590.8	30	0	282.34	0.215	+			32728	RAPAPRGG	8	66	391.22494832096294	780.4353437087259	2	391.22479248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RAPAPRGG_	ENSG00000261308|ENST00000618634|FIGNL2	20.481830146152948	0.8005983782650069	4				NaN	NaN	0	NaN	12538	4613	17152
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17154	43.941	NaN	1702.2	30	0	207.92	0.106			+	50607	YDRYPALSF	9	61	566.2773198072049	1130.5400866812097	2	566.7797241210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YDRYPALSF_	REV__ENSG00000167173|ENST00000394987|C15orf39;REV__nc|nan|Q6ZRI6-2|C15orf39	60.11826168202944	0.21262886028301267	4				NaN	NaN	0	NaN	12539	4613	17152
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17155	43.943	NaN	2137.1	30	0	238.3	0.106	+			49726	VYNENLVHMI	10	63	616.3101094357147	1230.6056659382293	2	616.3108520507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYNENLVHMI_	ENSG00000116752|ENST00000369541|BCAS2;ENST00000425064.1_1_1:100858662-100858893:-|nuORF	90.60085204095205	0.12763388345653318	4				NaN	NaN	0	NaN	12540	4613	17152
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17156	43.945	NaN	1218.1	30	0	100.72	0.03			+	33264	RGGGGASN	8	36	338.16212078518816	674.3096886371764	2	338.1624450683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RGGGGASN_	REV__DACH2|p.I497Kfs*24|1|0.17|ENSG00000126733|chrX:86813216-86813217|-/AG|frameshift_variant;REV__DACH2|p.T525Pfs*33|2|0.19|ENSG00000126733|chrX:86814717-86814717|A/-|frameshift_variant;REV__DACH2|p.V121Rfs*6|1|0.36|ENSG00000126733|chrX:86148975-86148976|-/C|frameshift_variant;REV__ENSG00000126733|ENST00000373125|DACH2;REV__nc|ENSG00000126733|Q96NX9-2|DACH2	8.231297230196988	0.7812220690224883	4				NaN	NaN	0	NaN	12541	4613	17152
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17161	43.959	NaN	1838.8	30	0	463.86	0.214			+	13065	GFGFGAGG	8	43	335.15363303980087	668.2927131464018	2	335.1539001464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GFGFGAGG_	REV__CON__Q6IFZ6	10.184766708764876	0.7843118145031319	4				NaN	NaN	0	NaN	12543	4616	17160
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17162	43.963	NaN	1641.4	30	0	145	0.106	+			27110	MAPARLFAL	9	58	503.2804968756446	1004.5464408180892	2	503.2811279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_M(Oxidation (M))APARLFAL_	ENSG00000124145|ENST00000372733|SDC4;nc|ENSG00000124145|P31431-2|SDC4	55.50420428727701	0.2510918378945873	4				NaN	NaN	0	NaN	12544	4616	17160
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17163	43.965	NaN	3937.9	30	0	320.09	0.106	+			20989	KKGAGGGG	8	64	316.17997930904966	630.3454056848993	2	316.6819152832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KKGAGGGG_	ENSG00000198853|ENST00000361226|RUSC2	4.6817480819748125	0.7764044737779935	4				NaN	NaN	0	NaN	12545	4616	17160
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17164	43.967	NaN	1975.3	30	0	126.7	0.036	+			28033	NAAKIFNLY	9	66	527.2898362865651	1052.5651196399301	2	527.7909545898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NAAKIFNLY_	DPYSL3|p.A516Qfs*15|1|0.31|ENSG00000113657|chr5:147395638-147395638|G/-|frameshift_variant;ENSG00000072832|ENST00000324989|CRMP1;ENSG00000113657|ENST00000343218|DPYSL3;ENSG00000147647|ENST00000351513|DPYS;ENST00000506216.5_1_4:5749932-5890196:-|nuORF;ENST00000511535.1_1_4:5823489-5889136:-|nuORF;nc|ENSG00000072832|Q14194|CRMP1;nc|ENSG00000113657|Q14195|DPYSL3	35.61828744233558	0.47037581924408073	4				NaN	NaN	0	NaN	12546	4616	17160
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17169	43.981	NaN	6319.7	30	0	5189.8	0.214				-1	 	0	41	324.69326654018596	647.3719801471719	2	324.693603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12548	4619	17168
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17170	43.984	NaN	1082.9	30	0	216.34	0.034	+			35752	SDTTTPIKL	9	45	488.2708766881166	974.5272004430332	2	488.2711486816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SDTTTPIKL_	ENSG00000035403|ENST00000211998|VCL;nc|ENSG00000035403|P18206-2|VCL	44.377184641726394	0.36891676396732553	4				NaN	NaN	0	NaN	12549	4619	17168
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17177	44.014	NaN	3061.6	30	0	209.33	0.214	+			37906	SPCGPGGGG	9	56	344.63847299234686	687.2623930514937	2	344.63958740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SPCGPGGGG_	ENSG00000047188|ENST00000161863|YTHDC2;YTHDC2|p.N676Tfs*9|1|0.46|ENSG00000047188|chr5:113553824-113553824|A/-|frameshift_variant	20.481830146152948	0.6112419832031293	4				NaN	NaN	0	NaN	12550	4625	17176
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17178	44.018	NaN	1746.1	30	0	239.58	0.106	+			4182	ATFMEVLTK	9	58	520.277610168189	1038.5406674031778	2	520.2787475585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATFMEVLTK_	ENSG00000196712|ENST00000358273|NF1;ENST00000493220.5_2_17:29556858-29657521:+|nuORF;ENST00000495910.6_1_17:29490228-29576996:+|nuORF;nc|ENSG00000196712|P21359-2|NF1;nc|ENSG00000196712|P21359-4|NF1;nc|ENSG00000196712|P21359-6|NF1;NF1|p.F2429Qfs*7|1|0.17|ENSG00000196712|chr17:31349214-31349215|-/CAAGTAAGAATTAATT|frameshift_variant;NF1|p.K1386Rfs*20|1|0.33|ENSG00000196712|chr17:31252978-31252978|A/-|frameshift_variant	28.081489160057373	0.5408112046645406	4				NaN	NaN	0	NaN	12551	4625	17176
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17179	44.02	NaN	1067.7	30	0	115.38	0.106			+	16276	HEGFAVRN	8	46	465.2326933848489	NaN	0	465.2332458496094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HEGFAVRN_	REV__ENSG00000169126|ENST00000305242|ODAD2;REV__nc|ENSG00000169126|Q5T2S8-2|ODAD2	26.79610172149135	1.7418937515398478	4				NaN	NaN	0	NaN	12552	4625	17176
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17180	44.021	NaN	2462.1	30	0	356.83	0.037			+	25714	LRPPPAWSPP	10	44	373.2099806872433	NaN	0	373.2105712890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LRPPPAWSPP_	REV__ULK1|p.T575Rfs*72|1|0.43|ENSG00000177169|chr12:131915998-131915998|C/-|frameshift_variant	29.14955571784316	0.4044631218331212	4				NaN	NaN	0	NaN	12553	4625	17176
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17184	44.035	NaN	4602.4	30	0	544.64	0.214				-1	 	0	52	327.1643221893885	652.314091445577	2	327.165283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12554	4628	17183
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17185	44.039	NaN	3038.3	30	0	302.48	0.106	+			3860	ATAMLQSLLK	10	64	538.3120657285848	1074.6095785239695	2	538.313720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATAMLQSLLK_	ENSG00000196586|ENST00000369977|MYO6;nc|ENSG00000196586|Q9UM54-2|MYO6;nc|ENSG00000196586|Q9UM54-4|MYO6;nc|ENSG00000196586|Q9UM54-5|MYO6;nc|ENSG00000196586|Q9UM54-6|MYO6;nc|ENSG00000196586|Q9UM54|MYO6	82.83050618871818	0.17249597090446123	4				NaN	NaN	0	NaN	12555	4628	17183
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17186	44.041	NaN	1834.7	30	0	116.6	0.034			+	-1	MPIYPALM	8	58	476.2371670004854	950.4597810677708	2	476.2381591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_MPIYPALM(Oxidation (M))_	REV__ENSG00000100644|ENST00000337138|HIF1A;REV__nc|ENSG00000100644|Q16665-2|HIF1A;REV__nc|ENSG00000100644|Q16665-3|HIF1A	33.49298260027079	0.7007254697536482	4				NaN	NaN	0	NaN	12556	4628	17183
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17191	44.055	NaN	4386.5	30	0	761.33	0.144	+			788	AEFKEAFQL	9	69	541.7803709664292	1081.5461889996584	2	541.7813720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEFKEAFQL_	ENSG00000092841|ENST00000550697|MYL6;ENST00000546630.1_1_12:56552185-56553570:+|nuORF;ENST00000547703.5_1_12:56552185-56553570:+|nuORF;ENST00000548725.5_1_12:56552185-56553955:+|nuORF;ENST00000549017.5_1_12:56552185-56553840:+|nuORF;nc|ENSG00000092841|P60660-2|MYL6	154.1183686248401	0.005909203230691971	4				NaN	NaN	0	NaN	12558	4631	17190
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17195	44.071	NaN	6866.9	30	0	1438.8	0.215	+			789	AEFKEAFQL	9	72	541.7803709664292	1081.5461889996584	2	541.7803955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEFKEAFQL_	ENSG00000092841|ENST00000550697|MYL6;ENST00000546630.1_1_12:56552185-56553570:+|nuORF;ENST00000547703.5_1_12:56552185-56553570:+|nuORF;ENST00000548725.5_1_12:56552185-56553955:+|nuORF;ENST00000549017.5_1_12:56552185-56553840:+|nuORF;nc|ENSG00000092841|P60660-2|MYL6	138.06239232086	0.011389075116295402	4				NaN	NaN	0	NaN	12559	4634	17194
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17196	44.075	NaN	3821.1	30	0	775.81	0.106	+			9504	EKVELLEKA	9	73	529.807772376924	1057.600991820648	2	529.8080444335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EKVELLEKA_	ENSG00000189233|ENST00000413272|NUGGC;NUGGC|p.K555Yfs*17|1|0.07|ENSG00000189233|chr8:28033646-28033647|-/AGGTA|frameshift_variant	85.86182877749512	0.07653218437724067	4				NaN	NaN	0	NaN	12560	4634	17194
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17197	44.077	NaN	1120.9	30	0	105.25	0.034	+			51105	YLVKDLIA	8	52	467.78386719624984	NaN	0	467.7837219238281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YLVKDLIA_	ENSG00000139144|ENST00000538779|PIK3C2G;nc|ENSG00000139144|O75747-2|PIK3C2G;PIK3C2G|p.I437Yfs*5|1|0.42|ENSG00000139144|chr12:18338456-18338456|A/-|frameshift_variant;PIK3C2G|p.N798Mfs*16|2|0.21|ENSG00000139144|chr12:18488455-18488455|A/-|frameshift_variant	60.97194046774394	1.7418937515398478	4				NaN	NaN	0	NaN	12561	4634	17194
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17208	44.122	NaN	2119	30	0	391.05	0.143	+			15187	GTSMWVLVK	9	55	510.7803104187869	1019.5460679043738	2	510.78106689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTSMWVLVK_	ENSG00000197121|ENST00000354764|PGAP1;ENST00000470179.5_1_2:197712669-197791463:-|nuORF;nc|ENSG00000197121|Q75T13-2|PGAP1;nc|ENSG00000197121|Q75T13-3|PGAP1;nc|ENSG00000197121|Q75T13-4|PGAP1;PGAP1|p.K723Yfs*11|1|0.11|ENSG00000197121|chr2:196846002-196846003|-/CTATGTGTTTAAGGTAT|frameshift_variant	79.71258880314673	0.09879134589249085	4				NaN	NaN	0	NaN	12563	4643	17207
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17212	44.138	NaN	1416.1	30	0	237.26	0.215			+	47780	VSHRPFMR	8	56	515.2740665244006	NaN	0	515.2747192382812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSHRPFMR_	REV__ENST00000577066.2_1_17:79006438-79006606:-|nuORF	30.503639358989545	1.7418937515398478	4				NaN	NaN	0	NaN	12564	4646	17211
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17213	44.142	NaN	1545.9	30	0	75.491	0.038	+			49818	VYSRYFTTY	9	66	600.2921752929688	NaN	0	600.2921752929688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	49.44154591367651	0.21054156626303966	4				NaN	NaN	0	NaN	12565	4646	17211
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17226	44.19	NaN	2230.4	30	0	179.18	0.214	+			49051	VVINVNNILK	10	55	563.3525379511059	1124.6905229690117	2	563.854736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVINVNNILK_	ENSG00000069248|ENST00000261396|NUP133;NUP133|p.F1142Lfs*3|1|0.35|ENSG00000069248|chr1:229441949-229441949|A/-|frameshift_variant	74.25504064058377	0.24255678544297835	4				NaN	NaN	0	NaN	12569	4655	17225
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17227	44.193	NaN	1499.3	30	0	179.3	0.036			+	30716	QDGSEQTRSI	10	57	560.7660915095904	NaN	0	560.7670288085938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QDGSEQTRSI_	REV__ENSG00000159166|ENST00000391967|LAD1	35.15202426646627	0.38475398474706135	4				NaN	NaN	0	NaN	12570	4655	17225
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17234	44.222	NaN	2893.4	30	0	354.03	0.143				-1	 	0	59	511.25396204855593	1020.4933711639119	2	511.2544860839844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12571	4661	17233
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17238	44.238	NaN	2790.1	30	0	653.82	0.215				-1	 	0	40	336.5338523513709	1006.5797276543128	3	336.5345153808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12572	4664	17237
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17239	44.242	NaN	1420.2	30	0	231.21	0.106			+	-1	DMKLKERQ	8	52	532.281844843601	1062.549136754002	2	532.2822875976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_DM(Oxidation (M))KLKERQ_	REV__ENST00000456342.5_1_21:17859850-17979403:+|nuORF	18.324413293986947	0.7971860551947066	4				NaN	NaN	0	NaN	12573	4664	17237
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17240	44.243	NaN	1302.3	30	0	80.817	0.035	+			51282	YRVLASALF	9	55	520.3005602079944	NaN	0	520.2992553710938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YRVLASALF_	ANO9|p.D688Ifs*44|1|0.15|ENSG00000185101|chr11:418789-418789|G/-|frameshift_variant;ENSG00000185101|ENST00000332826|ANO9;ENST00000526142.5_1_11:419653-429752:-|nuORF;ENST00000528927.5_1_11:418373-431830:-|nuORF;ENST00000532094.5_1_11:420655-431830:-|nuORF;ENST00000534161.5_1_11:418373-429524:-|nuORF;nc|ENSG00000185101|A1A5B4-2|ANO9	37.81151784470057	0.28666463014928195	4				NaN	NaN	0	NaN	12574	4664	17237
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17244	44.257	NaN	1995.2	30	0	283.21	0.214			+	31150	QGGSGGNA	8	44	324.1409735765961	646.2673942199922	2	324.14263916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QGGSGGNA_	REV__ENSG00000188779|ENST00000380035|SKOR1	12.206847966760668	0.7875100812264838	4				NaN	NaN	0	NaN	12575	4667	17243
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17245	44.261	NaN	2538.6	30	0	288.33	0.106	+			11220	FIDASRLVY	9	70	542.2942972461315	1082.5740415590628	2	542.2944946289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FIDASRLVY_	CTNNA1|p.T832*|1|0.29|ENSG00000044115|chr5:138933859-138933862|CAGA/-|frameshift_variant;ENSG00000044115|ENST00000302763|CTNNA1;ENSG00000066032|ENST00000402739|CTNNA2;nc|ENSG00000044115|P35221-2|CTNNA1;nc|ENSG00000044115|P35221-3|CTNNA1;nc|ENSG00000066032|P26232-2|CTNNA2;nc|ENSG00000066032|P26232-3|CTNNA2;nc|ENSG00000066032|P26232-4|CTNNA2;nc|ENSG00000066032|P26232-5|CTNNA2;nc|ENSG00000066032|P26232-6|CTNNA2	69.6276240434122	0.14239879520340665	4				NaN	NaN	0	NaN	12576	4667	17243
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17246	44.263	NaN	1589.8	30	0	105.83	0.106				-1	 	0	63	413.2376154998636	824.4606780665272	2	413.2377014160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12577	4667	17243
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17247	44.265	NaN	1448.5	30	0	310.83	0.106			+	21330	KLTVSGQFK	9	57	504.29802082230054	NaN	0	504.2980651855469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KLTVSGQFK_	REV__ZNF25|p.P7S|1|0.12|ENSG00000175395|chr10:37957543-37957543|G/A|missense_variant	36.446750945000026	0.29355505452396785	4				NaN	NaN	0	NaN	12578	4667	17243
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17248	44.266	NaN	959.43	30	0	78.146	0.038			+	-1	SMQPRKWYS	9	59	612.7930350258388	NaN	0	612.7940063476562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SMQPRKWYS_	REV__ENSG00000150630|ENST00000618562|VEGFC	21.9598887501803	0.3626577482100488	4				NaN	NaN	0	NaN	12579	4667	17243
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17253	44.281	NaN	5349.9	30	0	279.32	0.214			+	29620	PGAGRAPR	8	77	391.22494832096294	780.4353437087259	2	391.2248229980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PGAGRAPR_	REV__CHRD|p.F806Lfs*5|1|0.25|ENSG00000090539|chr3:184387435-184387436|-/C|frameshift_variant;REV__ENSG00000090539|ENST00000204604|CHRD;REV__ENST00000460627.5_1_3:184098106-184099814:+|nuORF;REV__ENST00000470150.5_1_3:184098136-184100834:+|nuORF;REV__ENST00000496527.1_1_3:184098136-184098919:+|nuORF;REV__nc|ENSG00000090539|Q9H2X0-2|CHRD;REV__nc|ENSG00000090539|Q9H2X0-3|CHRD;REV__nc|ENSG00000090539|Q9H2X0-4|CHRD;REV__nc|ENSG00000090539|Q9H2X0-5|CHRD	20.481830146152948	0.8005983782650069	4				NaN	NaN	0	NaN	12581	4670	17252
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17254	44.284	NaN	1475.8	30	0	85.974	0.106	+			17479	ICSLCKHLK	9	62	522.7896674855326	1043.5647820378651	2	522.7901611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ICSLCKHLK_	ENSG00000212124|ENST00000390673|TAS2R19;ENSG00000212126|ENST00000506868|TAS2R50;ENSG00000226761|ENST00000533467|TAS2R46;ENSG00000255374|ENST00000531678|TAS2R43;ENSG00000256188|ENST00000539585|TAS2R30;ENSG00000256436|ENST00000390675|TAS2R31;TAS2R30|p.M209V|1|0.39|ENSG00000256188|chr12:11133620-11133620|T/C|missense_variant	58.78195531508484	0.22376836668196862	4				NaN	NaN	0	NaN	12582	4670	17252
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17255	44.286	NaN	2377	30	0	336.88	0.106				-1	GTMEWIMIK	9	62	562.7767446404308	1123.5389363476615	2	562.7776489257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_GTMEWIM(Oxidation (M))IK_	ENSG00000168273|ENST00000477703|UQCC5	52.936696900407355	0.27249468807391813	4				NaN	NaN	0	NaN	12583	4670	17252
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17256	44.288	NaN	1209.8	30	0	116.85	0.037	+			29314	NYNYLREW	8	56	579.2726718779645	NaN	0	579.2727661132812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NYNYLREW_	CDH10|p.D763N|1|0.35|ENSG00000040731|chr5:24487743-24487743|C/T|missense_variant	42.396135135203025	1.7418937515398478	4				NaN	NaN	0	NaN	12584	4670	17252
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17260	44.302	NaN	914.18	30	0	78.989	0.214			+	51380	YTLGYALGI	9	44	485.7658996582031	NaN	0	485.7658996582031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YTLGYALGI_	REV__ENSG00000005486|ENST00000006777|RHBDD2;REV__nc|ENSG00000005486|Q6NTF9-2|RHBDD2;REV__nc|ENSG00000005486|Q6NTF9-3|RHBDD2	31.954861631926434	0.3162336699109506	4				NaN	NaN	0	NaN	12585	4673	17259
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17261	44.306	NaN	1542.8	30	0	115.58	0.106	+			13700	GPQNASSLKFE	11	58	589.2957153320312	NaN	0	589.2957153320312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GPQNASSLKFE_	ENSG00000153113|ENST00000675179|CAST;nc|ENSG00000153113|P20810-10|CAST;nc|ENSG00000153113|P20810-2|CAST;nc|ENSG00000153113|P20810-3|CAST;nc|ENSG00000153113|P20810-4|CAST;nc|ENSG00000153113|P20810-5|CAST;nc|ENSG00000153113|P20810-7|CAST;nc|ENSG00000153113|P20810-8|CAST;nc|ENSG00000153113|P20810-9|CAST;nc|ENSG00000153113|P20810|CAST	32.75053402867276	0.4194607570143992	4				NaN	NaN	0	NaN	12586	4673	17259
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17262	44.307	NaN	1140.4	30	0	93.192	0.034			+	8975	EFLRALLS	8	54	474.779934467275	NaN	0	474.7793273925781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EFLRALLS_	REV__ENSG00000177706|ENST00000313766|FAM20C	44.116797842482775	1.7418937515398478	4				NaN	NaN	0	NaN	12587	4673	17259
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17267	44.322	NaN	2419	30	0	791.31	0.143	+			6625	AYSAKIALF	9	52	492.2811761289055	982.547799324611	2	492.28192138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AYSAKIALF_	DPYD|p.F707Lfs*4|2|0.3|ENSG00000188641|chr1:97306235-97306235|A/-|frameshift_variant;DPYD|p.L523Sfs*13|1|0.32|ENSG00000188641|chr1:97515899-97515899|G/-|frameshift_variant;ENSG00000188641|ENST00000370192|DPYD;ENST00000474241.1_1_1:98157206-98165091:-|nuORF	93.19546047674547	0.05585629608842056	4				NaN	NaN	0	NaN	12589	4676	17266
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17276	44.354	NaN	1438.6	30	0	119.41	0.214			+	-1	LFELPTECR	9	66	582.7893828062524	NaN	0	582.7899780273438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_LFELPTEC(Carbamidomethyl (C))R_	REV__ENSG00000165124|ENST00000374469|SVEP1;REV__nc|ENSG00000165124|Q4LDE5-3|SVEP1;REV__SVEP1|p.Y3375Mfs*48|1|0.3|ENSG00000165124|chr9:110386012-110386012|A/-|frameshift_variant	32.81241826257853	0.3119040447479903	4				NaN	NaN	0	NaN	12592	4682	17275
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17277	44.357	NaN	1416	30	0	123.39	0.106	+			13552	GLSQLLVLCR	10	62	551.3247269845747	NaN	0	551.3251342773438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GLSQLLVLCR_	ENST00000333046.8_3_9:140086129-140086441:-|nuORF	47.95952297671804	0.31850267256932663	4				NaN	NaN	0	NaN	12593	4682	17275
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17278	44.359	NaN	2086.7	30	0	134.98	0.106				-1	 	0	59	495.8022790605131	989.5900051878263	2	495.8019714355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12594	4682	17275
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17279	44.361	NaN	1577.8	30	0	224.54	0.035	+			24329	LFIPFNPLA	9	60	516.30029296875	NaN	0	516.30029296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LFIPFNPLA_	ENSG00000153066|ENST00000283033|TXNDC11;nc|ENSG00000153066|Q6PKC3|TXNDC11	39.252832667884924	0.27938773122138094	4				NaN	NaN	0	NaN	12595	4682	17275
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17287	44.391	NaN	1954.8	30	0	118.45	0.214	+			37041	SIRLWNYE	8	64	540.7779557235565	1079.5413585139129	2	540.7778930664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIRLWNYE_	ENSG00000243710|ENST00000372492|CFAP57;nc|ENSG00000243710|Q96MR6-2|CFAP57	40.5726180659479	0.6527593143185008	4				NaN	NaN	0	NaN	12597	4688	17286
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17288	44.395	NaN	1016.6	30	0	40.386	0.106			+	13334	GKPGLPGML	9	52	435.25130776017875	NaN	0	435.2511901855469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GKPGLPGML_	REV__COL27A1|p.P627L|1|0.47|ENSG00000196739|chr9:114169435-114169435|C/T|missense_variant	19.359975847455235	0.3714571876404798	4				NaN	NaN	0	NaN	12598	4688	17286
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17289	44.397	NaN	1043.5	30	0	247.45	0.106			+	28612	NKRVRAGF	8	52	474.2798090347544	NaN	0	474.28045654296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NKRVRAGF_	REV__ENSG00000180592|ENST00000449193|SKIDA1;REV__nc|ENSG00000180592|Q1XH10-2|SKIDA1	28.2542754592877	1.7418937515398478	4				NaN	NaN	0	NaN	12599	4688	17286
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17290	44.398	NaN	1317	30	0	127.24	0.106				-1	EACPEMHLL	9	59	550.250244140625	NaN	0	550.250244140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_EAC(Carbamidomethyl (C))PEMHLL_	LRRTM4|p.L186Wfs*20|1|0.33|ENSG00000176204|chr2:77519312-77519312|A/-|frameshift_variant	30.503639358989545	0.3235605894931338	4				NaN	NaN	0	NaN	12600	4688	17286
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17291	44.4	NaN	2134.2	30	0	163.75	0.037			+	28608	NKRESSSGSRG	11	72	582.7895055552754	1163.5644581773506	2	583.2918701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NKRESSSGSRG_	REV__ENSG00000167978|ENST00000301740|SRRM2;REV__nc|ENSG00000167978|Q9UQ35-2|SRRM2;REV__SRRM2|p.P2670Lfs*13|1|0.08|ENSG00000167978|chr16:2769268-2769268|C/-|frameshift_variant	31.634271133179894	0.6579734920221648	4				NaN	NaN	0	NaN	12601	4688	17286
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17298	44.43	NaN	1781.5	30	0	241.04	0.144	+			17860	IFTDLSSRF	9	63	543.2856760557628	NaN	0	543.2852783203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IFTDLSSRF_	ENSG00000079246|ENST00000392132|XRCC5;XRCC5|p.E287Kfs*11|2|0.25|ENSG00000079246|chr2:216127589-216127589|A/-|frameshift_variant;XRCC5|p.Q488Rfs*29|1|0.06|ENSG00000079246|chr2:216141305-216141305|C/-|frameshift_variant	45.97224482568171	0.23445038899310136	4				NaN	NaN	0	NaN	12602	4694	17297
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17305	44.462	NaN	3187.1	30	0	1084.3	0.144	+			49913	VYTTTVHWL	9	59	560.2949959165319	1118.5754388998637	2	560.2957763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYTTTVHWL_	ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1670Tfs*23|1|0.29|ENSG00000174231|chr17:1659487-1659487|C/-|frameshift_variant	97.47269410471826	0.04379738608259218	4				NaN	NaN	0	NaN	12603	4700	17304
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17309	44.478	NaN	2661.2	30	0	877.7	0.214	+			5312	ATVLQYAPKQ	10	44	373.54383807755096	NaN	0	373.54327392578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATVLQYAPKQ_	ENSG00000104093|ENST00000560891|DMXL2;nc|ENSG00000104093|Q8TDJ6-2|DMXL2;nc|ENSG00000104093|Q8TDJ6-3|DMXL2;nc|ENSG00000104093|Q8TDJ6|DMXL2	16.71738777980365	0.4201028297492154	4				NaN	NaN	0	NaN	12604	4703	17308
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17310	44.481	NaN	1278.6	30	0	106.82	0.106			+	18225	INLDKDNWM	9	55	574.7762383296313	NaN	0	574.776611328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_INLDKDNWM_	REV__tr|U7SNT5|U7SNT5_FUSNUdTDP-4-dehydrorhamnose3,5-epimeraseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01943PE=3SV=1	29.14955571784316	0.3303970763161698	4				NaN	NaN	0	NaN	12605	4703	17308
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17311	44.483	NaN	1217.9	30	0	116.71	0.035	+			40889	SVFLFLNIA	9	57	512.2964138203037	1022.5782747074073	2	512.297607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVFLFLNIA_	ENSG00000212127|ENST00000537503|TAS2R14	29.170058357718403	0.5306379469863586	4				NaN	NaN	0	NaN	12606	4703	17308
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17317	44.5	NaN	4483.7	30	0	380.34	0.214	+			10741	FAEGFVRAL	9	62	505.27670052074154	1008.5388481082831	2	505.2767028808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FAEGFVRAL_	ENSG00000177606|ENST00000371222|JUN;JUN|p.R257Kfs*53|1|0.31|ENSG00000177606|chr1:58782301-58782302|-/T|frameshift_variant	104.0567914643314	0.03506238181059741	4				NaN	NaN	0	NaN	12609	4706	17316
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17318	44.503	NaN	3677.2	30	0	758.41	0.106	+			11982	FVPVANEL	8	56	444.744610698431	887.474668463662	2	444.74462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FVPVANEL_	ENSG00000176658|ENST00000318217|MYO1D	76.84663266511073	0.3498490246073164	4				NaN	NaN	0	NaN	12610	4706	17316
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17319	44.505	NaN	1172.2	30	0	77.07	0.106	+			47388	VPKGNGTILK	10	55	513.8191593208928	NaN	0	513.8190307617188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VPKGNGTILK_	ENSG00000168743|ENST00000379987|NPNT;nc|ENSG00000168743|Q6UXI9-2|NPNT;nc|ENSG00000168743|Q6UXI9-3|NPNT;nc|ENSG00000168743|Q6UXI9-4|NPNT;nc|ENSG00000168743|Q6UXI9-5|NPNT;nc|ENSG00000168743|Q6UXI9-6|NPNT;NPNT|p.R542Gfs*10|1|0.43|ENSG00000168743|chr4:105968911-105968911|A/-|frameshift_variant	37.81151784470057	0.3760215235790741	4				NaN	NaN	0	NaN	12611	4706	17316
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17320	44.507	NaN	1153.9	30	0	154.83	0.106			+	24459	LGFQPIID	8	50	451.7541703799273	NaN	0	451.7539367675781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LGFQPIID_	REV__HERVH-int_dup4765|chr13:43060715-43061388:-|2.073122916940509|0.3800345561863495|2.45|479.0|14|3|sense	37.15910966729921	1.7418937515398478	4				NaN	NaN	0	NaN	12612	4706	17316
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17321	44.509	NaN	1124.4	30	0	84.432	0.106	+			17336	IAIGSQPVL	9	42	449.2733236211861	896.5320943091722	2	449.27362060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IAIGSQPVL_	ENSG00000068912|ENST00000185150|ERLEC1;nc|ENSG00000068912|Q96DZ1-3|ERLEC1	54.776311868738084	0.25715957988447635	4				NaN	NaN	0	NaN	12613	4706	17316
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17322	44.51	NaN	1391.5	30	0	201.77	0.106	+			41276	SVLKWAPSGN	10	55	529.7855610307017	NaN	0	529.78466796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVLKWAPSGN_	VRK2|p.S283N|1|0.04|ENSG00000028116|chr2:58135191-58135191|G/A|missense_variant	37.81151784470057	0.3760215235790741	4				NaN	NaN	0	NaN	12614	4706	17316
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17323	44.512	NaN	1535.3	30	0	205.37	0.034				-1	 	0	59	480.29928637977866	958.5840198263573	2	480.8005065917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12615	4706	17316
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17329	44.528	NaN	1533.2	30	0	120.55	0.145	+			49819	VYSRYFTTY	9	52	600.2904313069998	NaN	0	600.2894897460938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	54.776311868738084	0.17377682019723872	4				NaN	NaN	0	NaN	12618	4709	17328
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17339	44.576	NaN	1690.8	30	0	473.5	0.143				-1	 	0	32	336.5338523513709	1006.5797276543128	3	336.5343322753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12619	4718	17338
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17344	44.593	NaN	1696.2	30	0	148.43	0.214	+			3157	ASILSLVTK	9	55	466.29483711943203	NaN	0	466.2945556640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASILSLVTK_	ENSG00000143621|ENST00000361891|ILF2	49.536043120802724	0.20989033510253738	4				NaN	NaN	0	NaN	12621	4721	17343
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17345	44.596	NaN	1894	30	0	450.12	0.106	+			7450	DFIWGIGKQ	9	54	532.281844843601	1062.549136754002	2	532.2823486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DFIWGIGKQ_	ENSG00000126583|ENST00000263431|PRKCG;PRKCG|p.F614Sfs*41|1|0.2|ENSG00000126583|chr19:53906389-53906389|T/-|frameshift_variant	29.14955571784316	0.5308295550522326	4				NaN	NaN	0	NaN	12622	4721	17343
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17346	44.598	NaN	1173.5	30	0	196.66	0.106			+	37695	SLSLPALVAL	10	56	492.310302734375	NaN	0	492.310302734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLSLPALVAL_	REV__B2M|p.L12P|1|0.17|ENSG00000166710|chr15:44711581-44711581|T/C|missense_variant	44.116797842482775	0.3427969396372342	4				NaN	NaN	0	NaN	12623	4721	17343
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17347	44.6	NaN	1016.1	30	0	93.239	0.106			+	41176	SVKVIPTIF	9	52	502.3128052094743	1002.6110574857486	2	502.3131103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVKVIPTIF_	REV__ENSG00000131747|ENST00000423485|TOP2A;REV__nc|ENSG00000131747|P11388-2|TOP2A;REV__nc|ENSG00000131747|P11388-3|TOP2A;REV__nc|ENSG00000131747|P11388-4|TOP2A;REV__TOP2A|p.K1199Efs*11|1|0.23|ENSG00000131747|chr17:40396408-40396409|-/C|frameshift_variant;REV__TOP2A|p.T1205Hfs*19|4|0.35|ENSG00000131747|chr17:40396390-40396390|T/-|frameshift_variant	35.15202426646627	0.4747332964206883	4				NaN	NaN	0	NaN	12624	4721	17343
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17348	44.602	NaN	1253.7	30	0	124.33	0.036	+			13164	GGVALIWATY	10	61	525.7835918802036	NaN	0	525.7830200195312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GGVALIWATY_	ENSG00000084112|ENST00000326495|SSH1;ENST00000547862.6_1_12:109201407-109211001:-|nuORF;nc|ENSG00000084112|Q8WYL5-2|SSH1;nc|ENSG00000084112|Q8WYL5-3|SSH1;nc|ENSG00000084112|Q8WYL5-5|SSH1;SSH1|p.A419Hfs*5|1|0.54|ENSG00000084112|chr12:108799095-108799095|T/-|frameshift_variant;SSH1|p.L973Tfs*23|1|0.28|ENSG00000084112|chr12:108788222-108788223|-/G|frameshift_variant;SSH1|p.P350Lfs*30|1|0.49|ENSG00000084112|chr12:108800881-108800881|A/-|frameshift_variant	23.04248740728303	0.42010282974921537	4				NaN	NaN	0	NaN	12625	4721	17343
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17354	44.618	NaN	3919.3	30	0	200.38	0.214	+			30035	PPRARAGG	8	82	391.22494832096294	780.4353437087259	2	391.2253723144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PPRARAGG_	ENSG00000137261|ENST00000378214|KIAA0319;nc|ENSG00000137261|Q5VV43-2|KIAA0319;nc|ENSG00000137261|Q5VV43-3|KIAA0319;nc|ENSG00000137261|Q5VV43-4|KIAA0319	14.664097394203935	0.7913966407026132	4				NaN	NaN	0	NaN	12628	4724	17353
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17355	44.622	NaN	1266.9	30	0	78.954	0.106				-1	 	0	53	413.23779873596567	824.4610445387314	2	413.2383728027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12629	4724	17353
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17356	44.623	NaN	3094.3	30	0	827.63	0.037			+	-1	ATVKRPLMW	9	46	373.2097583868608	NaN	0	373.20989990234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_ATVKRPLM(Oxidation (M))W_	REV__ENST00000273610.3_1_3:48599595-48600222:-|nuORF	34.172542307311794	0.30503706118289736	4				NaN	NaN	0	NaN	12630	4724	17353
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17360	44.637	NaN	792.15	30	0	100.92	0.214	+			21441	KNCMIPFL	8	43	483.25034281931494	964.4861327054299	2	483.25054931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KNCMIPFL_	ENST00000379441.7_1_12:57008905-57009103:-|nuORF;ENST00000549884.5_1_12:57008998-57009103:-|nuORF	37.028477286268924	0.6747514403204248	4				NaN	NaN	0	NaN	12631	4727	17359
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17361	44.641	NaN	1028.2	30	0	92.918	0.034	+			19055	IYGSSHSW	8	55	468.71386507710787	NaN	0	468.7140808105469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IYGSSHSW_	DUOX1|p.S186N|1|0.29|ENSG00000137857|chr15:45135535-45135535|G/A|missense_variant;ENSG00000137857|ENST00000389037|DUOX1;ENSG00000140279|ENST00000389039|DUOX2;nc|ENSG00000140279|Q9NRD8|DUOX2	35.200714571348534	1.7418937515398478	4				NaN	NaN	0	NaN	12632	4727	17359
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17371	44.687	NaN	1274.5	30	0	112.81	0.213	+			11187	FGYPVYSYVD	10	52	605.2798454009227	NaN	0	605.2807006835938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FGYPVYSYVD_	EOGT|p.C97Y|1|0.3|ENSG00000163378|chr3:69008449-69008449|C/T|missense_variant	27.882242232435846	0.4086243523356342	4				NaN	NaN	0	NaN	12633	4736	17370
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17372	44.691	NaN	1367.6	30	0	104.38	0.036			+	44891	TTWAWLWL	8	51	538.7817525213932	1075.5489521095863	2	538.7832641601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTWAWLWL_	REV__ENST00000415930.7_2_19:34891015-34891072:+|nuORF	65.80317337860623	0.44433089765398776	4				NaN	NaN	0	NaN	12634	4736	17370
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17376	44.705	NaN	3366.7	30	0	287.38	0.215			+	6772	CETLPKFVNN	10	70	582.7895055552754	1163.5644581773506	2	582.78955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CETLPKFVNN_	REV__ENSG00000175105|ENST00000636215|ZNF654	39.252832667884924	0.5560298534376815	4				NaN	NaN	0	NaN	12635	4739	17375
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17377	44.708	NaN	1899.6	30	0	128.57	0.106				-1	 	0	58	495.8022790605131	989.5900051878263	2	495.8023376464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12636	4739	17375
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17378	44.71	NaN	1864	30	0	627.88	0.035	+			51036	YLAALAKAC	9	54	490.7653303778303	979.5161078224606	2	490.76495361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_YLAALAKAC(Carbamidomethyl (C))_	ENSG00000048828|ENST00000277165|FAM120A;FAM120A|p.V551Sfs*6|1|0.21|ENSG00000048828|chr9:93529491-93529491|C/-|frameshift_variant;nc|ENSG00000048828|Q9NZB2-2|FAM120A;nc|ENSG00000048828|Q9NZB2-4|FAM120A;nc|ENSG00000048828|Q9NZB2-5|FAM120A;nc|ENSG00000048828|Q9NZB2-6|FAM120A	42.47446043378293	0.39123495718708534	4				NaN	NaN	0	NaN	12637	4739	17375
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17382	44.724	NaN	1051	30	0	52.68	0.214	+			36251	SENAIVWKI	9	55	530.2953429810368	1058.5761330288735	2	530.7979125976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SENAIVWKI_	AP2M1|p.I386Hfs*6|1|0.17|ENSG00000161203|chr3:184182844-184182845|-/C|frameshift_variant;ENSG00000161203|ENST00000292807|AP2M1;ENST00000461733.5_1_3:183898306-183901401:+|nuORF;nc|ENSG00000161203|Q96CW1-2|AP2M1	67.49366992349736	0.1516260258713357	4				NaN	NaN	0	NaN	12638	4742	17381
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17383	44.728	NaN	1546.9	30	0	119.72	0.035	+			46708	VGLNVFLEK	9	55	509.79980441629	1017.58505589938	2	510.3013916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VGLNVFLEK_	ENSG00000153037|ENST00000505459|SRP19;ENST00000512790.5_1_5:112197073-112227301:+|nuORF;nc|ENSG00000153037|P09132-2|SRP19	52.167168403610894	0.27890951017331667	4				NaN	NaN	0	NaN	12639	4742	17381
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17387	44.742	NaN	1431.9	30	0	72.529	0.141	+			30052	PPVSSRAR	8	56	435.25094786323393	868.4873427932679	2	435.2512512207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PPVSSRAR_	ENST00000568542.5_1_16:2255373-2256424:+|nuORF	28.2542754592877	0.7411748056684583	4				NaN	NaN	0	NaN	12640	4745	17386
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17397	44.789	NaN	1937.7	30	0	160.66	0.214				-1	AIMHPGVMCI	10	66	544.260720715823	NaN	0	544.2594604492188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_AIM(Oxidation (M))HPGVMCI_	WDFY4|p.V834M|1|0.32|ENSG00000128815|chr10:48760387-48760387|G/A|missense_variant	44.53106598305862	0.34017787621393314	4				NaN	NaN	0	NaN	12641	4754	17396
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17398	44.793	NaN	1448.2	30	0	149.84	0.035			+	25855	LSEVVAAVKL	10	58	514.8208178676429	1027.6270828020856	2	514.8214111328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSEVVAAVKL_	REV__ENSG00000166377|ENST00000426216|ATP9B;REV__nc|ENSG00000166377|O43861-2|ATP9B	19.996771675451527	0.7148376616046445	4				NaN	NaN	0	NaN	12642	4754	17396
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17405	44.823	NaN	1332.5	30	0	128.63	0.143				-1	 	0	58	522.3094146252677	521.3021381586676	1	522.3080444335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12643	4760	17404
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17409	44.839	NaN	1392.1	30	0	169.43	0.144			+	13692	GPLPLPTPPK	10	54	508.81089572947246	1015.607238525745	2	508.8122253417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GPLPLPTPPK_	REV__ENST00000253799.7_1_17:41001157-41001271:+|nuORF	27.882242232435846	0.6521336255503853	4				NaN	NaN	0	NaN	12644	4763	17408
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17413	44.855	NaN	1721	30	0	86.633	0.144	+			28314	NEFPEPIKL	9	66	543.7952013630575	1085.5758497929148	2	544.2974853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NEFPEPIKL_	ENSG00000075785|ENST00000265062|RAB7A	49.536043120802724	0.308405419312776	4				NaN	NaN	0	NaN	12645	4766	17412
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17418	44.871	NaN	1401	30	0	103.06	0.215			+	51414	YTSRKAKVP	9	58	525.3088989257812	NaN	0	525.3088989257812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YTSRKAKVP_	REV__ENSG00000148308|ENST00000372097|GTF3C5;REV__nc|ENSG00000148308|Q9Y5Q8-2|GTF3C5;REV__nc|ENSG00000148308|Q9Y5Q8-3|GTF3C5	34.172542307311794	0.30503706118289736	4				NaN	NaN	0	NaN	12647	4769	17417
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17419	44.875	NaN	1605.8	30	0	175.84	0.106	+			49820	VYSRYFTTY	9	57	600.2921142578125	NaN	0	600.2921142578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	60.11826168202944	0.14881452885248947	4				NaN	NaN	0	NaN	12648	4769	17417
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17420	44.877	NaN	1487.2	30	0	119.06	0.035			+	28485	NGLLALSNPL	10	53	506.29741138657505	NaN	0	506.296630859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NGLLALSNPL_	REV__ENST00000504376.6_1_5:22505402-22853218:-|nuORF	40.05817265558897	0.3684561582319974	4				NaN	NaN	0	NaN	12649	4769	17417
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17424	44.891	NaN	3246.9	30	0	839.13	0.144	+			4368	ATGSWDSFLK	10	63	556.274127175694	1110.533701418188	2	556.2755126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATGSWDSFLK_	ENSG00000078369|ENST00000378609|GNB1;ENSG00000111664|ENST00000229264|GNB3;ENSG00000172354|ENST00000303210|GNB2;nc|ENSG00000111664|P16520-2|GNB3;nc|ENSG00000172354|P62879-2|GNB2	86.18897241530135	0.15289278403033058	4				NaN	NaN	0	NaN	12650	4772	17423
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17429	44.908	NaN	1181	30	0	151.94	0.143	+			21407	KMQCQKGI	8	50	496.75598849459146	991.497424055983	2	496.75701904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_KMQC(Carbamidomethyl (C))QKGI_	TBC1D10C|p.R90Q|1|0.22|ENSG00000175463|chr11:67405415-67405415|G/A|missense_variant	52.29916861842294	0.578018602984656	4				NaN	NaN	0	NaN	12652	4775	17428
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17435	44.926	NaN	2413.1	30	0	629.29	0.214				-1	 	0	29	336.5338334297528	1006.5796708894584	3	336.5343322753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12655	4778	17434
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17436	44.93	NaN	1792.3	30	0	134.05	0.106				-1	 	0	57	355.2140047700358	708.4134566068716	2	355.21441650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12656	4778	17434
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17437	44.931	NaN	1037.2	30	0	104.02	0.035	+			48435	VTKKQRGDI	9	50	522.8142518127155	NaN	0	522.8141479492188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTKKQRGDI_	ENSG00000106571|ENST00000395925|GLI3;GLI3|p.P1033Rfs*46|3|0.44|ENSG00000106571|chr7:41965975-41965975|G/-|frameshift_variant	26.69291269510374	0.34280015626154364	4				NaN	NaN	0	NaN	12657	4778	17434
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17442	44.946	NaN	2735.8	30	0	430.8	0.214	+			41031	SVIALFLIQ	9	53	502.3128052094743	1002.6110574857486	2	502.31280517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVIALFLIQ_	ENST00000310528.8_1_13:53262132-53262462:+|nuORF	49.536043120802724	0.308405419312776	4				NaN	NaN	0	NaN	12659	4781	17441
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17443	44.949	NaN	1661.2	30	0	107.24	0.106	+			49547	VYAQVARLF	9	63	533.80606678642	NaN	0	533.8062133789062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYAQVARLF_	ENSG00000169375|ENST00000394947|SIN3A;ENST00000394947.7_1_15:75702535-75702580:-|nuORF;SIN3A|p.G659Afs*26|1|0.14|ENSG00000169375|chr15:75396375-75396375|C/-|frameshift_variant	99.37495909608758	0.022697614825424036	4				NaN	NaN	0	NaN	12660	4781	17441
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17444	44.951	NaN	1547.1	30	0	314.57	0.106	+			21308	KLSSTYGKI	9	50	498.7891753019207	995.5637976706414	2	498.78997802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KLSSTYGKI_	ENSG00000174502|ENST00000367135|SLC26A9;nc|ENSG00000174502|Q7LBE3-2|SLC26A9;SLC26A9|p.V695M|1|0.26|ENSG00000174502|chr1:205920203-205920203|C/T|missense_variant	51.19269402634007	0.2889735674168909	4				NaN	NaN	0	NaN	12661	4781	17441
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17445	44.953	NaN	1231.6	30	0	119.76	0.035	+			50346	WVGDSTGVIL	10	61	523.7794911853792	NaN	0	523.7801513671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_WVGDSTGVIL_	ENSG00000134243|ENST00000256637|SORT1;ENST00000483508.5_1_1:109910028-109912178:-|nuORF	40.77816245573522	0.36390427802201647	4				NaN	NaN	0	NaN	12662	4781	17441
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17450	44.967	NaN	5219.5	30	0	319.49	0.214				-1	 	0	77	413.23779873596567	824.4610445387314	2	413.23785400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12664	4784	17449
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17451	44.971	NaN	1919.3	30	0	167.74	0.106	+			15582	GVHAKRGG	8	61	391.22494832096294	780.4353437087259	2	391.2247314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GVHAKRGG_	CALN1|p.Y70Vfs*26|1|0.3|ENSG00000183166|chr7:72106205-72106206|-/C|frameshift_variant	21.70233525837049	0.7917639344264583	4				NaN	NaN	0	NaN	12665	4784	17449
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17452	44.973	NaN	1790.4	30	0	551.02	0.035	+			42178	SYVLERIK	8	54	504.2982897904158	NaN	0	504.29754638671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SYVLERIK_	ENSG00000108242|ENST00000285979|CYP2C18	51.33545320467046	1.7418937515398478	4				NaN	NaN	0	NaN	12666	4784	17449
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17456	44.987	NaN	2601.8	30	0	564.54	0.214	+			4351	ATGRICLDIR	10	46	373.2095718100123	1116.6068860302369	3	373.20977783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATGRICLDIR_	ENSG00000166147|ENST00000316623|FBN1	27.047317107675042	0.6589519614906109	4				NaN	NaN	0	NaN	12667	4787	17455
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17457	44.99	NaN	1112.8	30	0	178.08	0.034	+			10278	ETLSNKKK	8	51	474.27998319291856	946.5454134526371	2	474.281005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ETLSNKKK_	ENSG00000132718|ENST00000368324|SYT11	30.503639358989545	0.7238069182250283	4				NaN	NaN	0	NaN	12668	4787	17455
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17466	45.022	NaN	1720.9	30	0	149.82	0.213	+			2246	ALTKQCVLIES	11	60	631.3433730485295	1260.672193163859	2	631.3441772460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_ALTKQC(Carbamidomethyl (C))VLIES_	ENST00000486882.5_1_1:79093429-79094083:+|nuORF	43.650786325866115	0.5079891456189096	4				NaN	NaN	0	NaN	12671	4793	17465
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17467	45.026	NaN	1450.7	30	0	159.86	0.106			+	47616	VSAALKEI	8	42	415.75223032789813	829.4899077225963	2	415.7528076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSAALKEI_	REV__ENSG00000088280|ENST00000336689|ASAP3;REV__ENST00000478858.5_1_1:23767870-23768724:-|nuORF;REV__nc|ENSG00000088280|Q8TDY4-3|ASAP3	44.116797842482775	0.6307669463330267	4				NaN	NaN	0	NaN	12672	4793	17465
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17468	45.028	NaN	1410	30	0	90.013	0.036	+			27617	MPPPPPPVPPA	11	62	548.7970108475429	NaN	0	548.7975463867188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MPPPPPPVPPA_	ENSG00000004975|ENST00000005340|DVL2	31.954861631926434	0.423006731851301	4				NaN	NaN	0	NaN	12673	4793	17465
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17472	45.042	NaN	1328.1	30	0	117.37	0.214	+			28006	MVYFLILY	8	56	539.2907048591387	NaN	0	539.290771484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))VYFLILY_	ENSG00000127364|ENST00000247881|TAS2R4	54.89457262308372	1.7418937515398478	4				NaN	NaN	0	NaN	12674	4796	17471
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17473	45.045	NaN	1590.3	30	0	195.46	0.035	+			32847	RCRAPRPPG	9	57	505.27712398470777	NaN	0	505.27532958984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RCRAPRPPG_	ENST00000260403.6_1_15:43425920-43426470:+|nuORF	29.14955571784316	0.3303970763161698	4				NaN	NaN	0	NaN	12675	4796	17471
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17481	45.076	NaN	1466.1	30	0	246.59	0.141	+			29073	NTKPTQVL	8	50	450.76019287109375	NaN	0	450.76019287109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NTKPTQVL_	ENSG00000091409|ENST00000684293|ITGA6;nc|ENSG00000091409|P23229-3|ITGA6;nc|ENSG00000091409|P23229-4|ITGA6;nc|ENSG00000091409|P23229-5|ITGA6;nc|ENSG00000091409|P23229-6|ITGA6;nc|ENSG00000091409|P23229-7|ITGA6;nc|ENSG00000091409|P23229-9|ITGA6;nc|ENSG00000091409|P23229|ITGA6	54.776311868738084	1.7418937515398478	4				NaN	NaN	0	NaN	12677	4802	17480
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17489	45.108	NaN	5267.6	30	0	2892	0.214				-1	 	0	57	368.71966701542783	735.4247810976557	2	368.719970703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12679	4808	17488
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17490	45.112	NaN	1950.3	30	0	90.993	0.106			+	20748	KGVPGRAAGG	10	59	435.25094786323393	868.4873427932679	2	435.25164794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KGVPGRAAGG_	REV__chr20:45814470-45815390|467|14.73|0.65|4.5|+|ENST00000335046|UBE2C,UBE2C;REV__chr20:45814470-45815854|444|10.08|0.42|4.6|+|ENST00000405520|UBE2C,UBE2C;REV__chr20:45815540-45815854|455|13.48|0.56|4.59|+|ENST00000617055|UBE2C,UBE2C;REV__ENSG00000175063|ENST00000356455|UBE2C;REV__nc|ENSG00000175063|O00762-3|UBE2C;REV__nc|ENSG00000175063|O00762-4|UBE2C	29.14955571784316	0.6417842315402807	4				NaN	NaN	0	NaN	12680	4808	17488
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17491	45.113	NaN	1235.5	30	0	135.76	0.031			+	43739	TLAQFVRPF	9	48	360.20676026981465	NaN	0	360.2071228027344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TLAQFVRPF_	REV__nc|ENSG00000148814|Q9C0I9-4|LRRC27	25.57405402267927	0.3484490411150625	4				NaN	NaN	0	NaN	12681	4808	17488
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17496	45.128	NaN	3010.5	30	0	314.63	0.214	+			46571	VFLPKDVAL	9	63	501.3049935279433	1000.5954341226866	2	501.30499267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VFLPKDVAL_	ENSG00000096696|ENST00000379802|DSP;nc|ENSG00000096696|P15924-2|DSP;nc|ENSG00000096696|P15924-3|DSP	58.22992032128504	0.22837015374068087	4				NaN	NaN	0	NaN	12683	4811	17495
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17497	45.131	NaN	1269.5	30	0	150.82	0.037	+			30764	QDQDWGCRR	9	52	582.2556762695312	NaN	0	582.2556762695312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QDQDWGCRR_	ENST00000555253.1_1_14:75413094-75413220:-|nuORF	21.9598887501803	0.3626577482100488	4				NaN	NaN	0	NaN	12684	4811	17495
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17504	45.161	NaN	1150.6	30	0	93.733	0.214	+			17326	IAGSYNNSMF	10	62	552.2459106445312	NaN	0	552.2459106445312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IAGSYNNSMF_	ENST00000555392.1_1_14:74423051-74423234:+|nuORF	37.81151784470057	0.3760215235790741	4				NaN	NaN	0	NaN	12685	4817	17503
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17505	45.165	NaN	2762.7	30	0	575.85	0.037			+	42409	TAKLKEVAEE	10	51	373.21003211909505	NaN	0	373.20953369140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAKLKEVAEE_	REV__ENSG00000163820|ENST00000296137|FYCO1;REV__nc|ENSG00000163820|Q9BQS8-4|FYCO1	27.882242232435846	0.4086243523356342	4				NaN	NaN	0	NaN	12686	4817	17503
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17509	45.179	NaN	1738.2	30	0	131.74	0.138	+			43390	TGGGGKAK	8	57	338.19311498497024	674.3716770367405	2	338.19366455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TGGGGKAK_	ENST00000443451.6_1_12:124809950-124819187:-|nuORF	19.359975847455235	0.7988239741663654	4				NaN	NaN	0	NaN	12687	4820	17508
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17514	45.195	NaN	2713.8	30	0	289.53	0.142	+			81	AACNIYSTL	9	52	478.23091619084727	954.4472794484946	2	478.2313232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AACNIYSTL_	ENSG00000158467|ENST00000325006|AHCYL2;nc|ENSG00000158467|Q96HN2-2|AHCYL2;nc|ENSG00000158467|Q96HN2-3|AHCYL2;nc|ENSG00000158467|Q96HN2-4|AHCYL2;TNPO3-AHCYL2|1|fusion	49.44154591367651	0.3095138337212152	4				NaN	NaN	0	NaN	12689	4823	17513
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17518	45.212	NaN	6639.5	30	0	1176.1	0.143				-1	 	0	63	504.3099733054297	1006.6053936776594	2	504.3109436035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12690	4826	17517
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17522	45.228	NaN	1641.4	30	0	170.69	0.213	+			49814	VYSRYFTTY	9	59	600.290019869334	1198.5654868054678	2	600.2925415039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	58.22992032128504	0.22837015374068087	4				NaN	NaN	0	NaN	12691	4829	17521
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17523	45.232	NaN	703.77	30	0	55.802	0.033	+			3379	ASQAVWFS	8	37	448.2187905790549	NaN	0	448.21929931640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASQAVWFS_	ENST00000413030.6_1_2:64478255-64478417:+|nuORF	35.61828744233558	1.7418937515398478	4				NaN	NaN	0	NaN	12692	4829	17521
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17528	45.246	NaN	1035.1	30	0	263.73	0.144	+			12328	GDILWEHLE	9	53	556.274127175694	1110.533701418188	2	556.2742919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GDILWEHLE_	ENSG00000134954|ENST00000392668|ETS1;ENSG00000157557|ENST00000360938|ETS2;ETS1|p.N203Rfs*56|1|0.07|ENSG00000134954|chr11:128484945-128484946|-/ATTTCTTC|frameshift_variant;nc|ENSG00000134954|P14921-2|ETS1;nc|ENSG00000134954|P14921-5|ETS1;nc|ENSG00000134954|P14921|ETS1	18.262085536374414	0.6112419832031293	4				NaN	NaN	0	NaN	12694	4832	17527
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17535	45.278	NaN	1992.2	30	0	356.26	0.143				-1	 	0	30	336.53391290560484	1006.5799093170145	3	336.5341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12695	4838	17534
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17539	45.294	NaN	1444.7	30	0	98.281	0.144				-1	AFMKGVFTF	9	59	532.2674389772712	1062.5203250213424	2	532.2670288085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_AFM(Oxidation (M))KGVFTF_	ENSG00000244187|ENST00000290079|TMEM141;ENST00000465017.5_1_9:139685862-139687281:+|nuORF;ENST00000489739.1_1_9:139685858-139686514:+|nuORF	35.61828744233558	0.47037581924408073	4				NaN	NaN	0	NaN	12696	4841	17538
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17543	45.31	NaN	4477.9	30	0	227.9	0.214				-1	 	0	74	413.23779873596567	824.4610445387314	2	413.2380676269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12697	4844	17542
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17544	45.314	NaN	1241.8	30	0	109.49	0.037	+			16684	HIRRPMNAF	9	56	571.307861328125	NaN	0	571.307861328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HIRRPMNAF_	CIC|p.A785Pfs*139|1|0.34|ENSG00000079432|chr19:42291117-42291117|G/-|frameshift_variant;CIC|p.E1288Gfs*56|1|0.3|ENSG00000079432|chr19:42293654-42293655|-/G|frameshift_variant;CIC|p.P1248Hfs*54|3|0.34|ENSG00000079432|chr19:42293224-42293224|C/-|frameshift_variant;CIC|p.P509Hfs*14|2|0.27|ENSG00000079432|chr19:42290289-42290289|C/-|frameshift_variant;CIC|p.P518Rfs*5|2|0.37|ENSG00000079432|chr19:42290317-42290317|C/-|frameshift_variant;CIC|p.T1217Nfs*6|1|0.23|ENSG00000079432|chr19:42293133-42293134|-/A|frameshift_variant;ENSG00000079432|ENST00000681038|CIC;nc|ENSG00000079432|Q96RK0-2|CIC;SOX17|p.R67H|1|0.27|ENSG00000164736|chr8:54458338-54458338|G/A|missense_variant	39.252832667884924	0.27938773122138094	4				NaN	NaN	0	NaN	12698	4844	17542
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17551	45.343	NaN	1565.8	30	0	207.78	0.214	+			28197	NASLQFEE	8	53	469.21552193893973	NaN	0	469.21630859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NASLQFEE_	ENST00000367139.7_1_1:205744106-205744529:-|nuORF	49.44154591367651	1.7418937515398478	4				NaN	NaN	0	NaN	12699	4850	17550
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17552	45.347	NaN	1560.5	30	0	332.52	0.036			+	21697	KQFYLLIGE	9	68	555.8133130787141	NaN	0	555.8133544921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KQFYLLIGE_	REV__ENST00000607540.1_1_2:56612843-56612933:+|nuORF	47.91560031466742	0.22105767942158736	4				NaN	NaN	0	NaN	12700	4850	17550
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17557	45.361	NaN	2682.9	30	0	675.38	0.214			+	-1	CKGQKLRDI	9	51	373.21003211909505	NaN	0	373.2100524902344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_C(Carbamidomethyl (C))KGQKLRDI_	REV__ENSG00000047634|ENST00000380041|SCML1;REV__nc|ENSG00000047634|Q9UN30-1|SCML1;REV__nc|ENSG00000047634|Q9UN30-2|SCML1	25.57405402267927	0.3484490411150625	4				NaN	NaN	0	NaN	12702	4853	17556
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17558	45.365	NaN	1561	30	0	198.41	0.034	+			36628	SGGLFASIAI	10	54	468.2631614881205	934.511770043041	2	468.26348876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SGGLFASIAI_	ENST00000337338.9_1_1:90398692-90398947:+|nuORF	44.116797842482775	0.5112108506279902	4				NaN	NaN	0	NaN	12703	4853	17556
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17562	45.379	NaN	2283.2	30	0	219.52	0.143	+			39434	STEFLALMK	9	55	520.2769232779227	1038.5392936226453	2	520.7777709960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STEFLALMK_	DYNC1H1|p.F2635Lfs*67|1|0.16|ENSG00000197102|chr14:102017141-102017141|T/-|frameshift_variant;DYNC1H1|p.G1902Vfs*27|2|0.27|ENSG00000197102|chr14:102006154-102006154|G/-|frameshift_variant;DYNC1H1|p.K3112Hfs*3|1|0.31|ENSG00000197102|chr14:102027998-102027999|-/TCACAAG|frameshift_variant;DYNC1H1|p.W4201Gfs*43|1|0.42|ENSG00000197102|chr14:102043958-102043958|G/-|frameshift_variant;ENSG00000197102|ENST00000360184|DYNC1H1	56.72105179125745	0.24094814563026265	4				NaN	NaN	0	NaN	12704	4856	17561
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17566	45.395	NaN	1362.8	30	0	93.088	0.144	+			30197	PSPLLTFASQ	10	62	530.787803661158	NaN	0	530.7869262695312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PSPLLTFASQ_	ENST00000379328.7_1_10:8097346-8097625:+|nuORF	41.42661286455405	0.3598046802465243	4				NaN	NaN	0	NaN	12705	4859	17565
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17573	45.427	NaN	929.93	30	0	88.663	0.143			+	29541	PELFDKVM	8	47	489.74968370648924	977.4848144797785	2	489.7499694824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PELFDKVM_	REV__ENSG00000186075|ENST00000348931|ZPBP2;REV__nc|ENSG00000186075|Q6X784-2|ZPBP2;REV__ZPBP2|p.R246Gfs*27|1|0.24|ENSG00000186075|chr17:39875275-39875275|T/-|frameshift_variant;REV__ZPBP2|p.T125Qfs*32|1|0.39|ENSG00000186075|chr17:39871587-39871587|A/-|frameshift_variant	45.9519527083369	0.6193794311207887	4				NaN	NaN	0	NaN	12706	4865	17572
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17580	45.458	NaN	2399.3	30	0	298.14	0.214	+			26913	LYCGKTLLF	9	60	557.8012460269836	1113.587939120767	2	557.8028564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_LYC(Carbamidomethyl (C))GKTLLF_	ENSG00000050130|ENST00000616435|JKAMP;nc|ENSG00000050130|Q9P055-3|JKAMP;nc|ENSG00000050130|Q9P055-5|JKAMP	62.107414245175825	0.1960472003779324	4				NaN	NaN	0	NaN	12707	4871	17579
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17581	45.462	NaN	1838	30	0	276.31	0.037	+			19560	KCNACRKLF	9	65	570.2957517858171	1138.576950638434	2	570.295654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_KC(Carbamidomethyl (C))NACRKLF_	ENSG00000141946|ENST00000269834|ZIM3	51.33545320467046	0.2872990594074956	4				NaN	NaN	0	NaN	12708	4871	17579
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17585	45.476	NaN	1033.4	30	0	71.499	0.214			+	29673	PGQVARKN	8	54	435.25094786323393	868.4873427932679	2	435.2515869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PGQVARKN_	REV__ENSG00000102524|ENST00000375887|TNFSF13B;REV__nc|ENSG00000102524|Q9Y275-2|TNFSF13B;REV__nc|ENSG00000102524|Q9Y275-3|TNFSF13B;REV__TNFSF13B|p.F194Lfs*18|1|0.19|ENSG00000102524|chr13:108303348-108303348|T/-|frameshift_variant	26.79610172149135	0.7524337208463756	4				NaN	NaN	0	NaN	12709	4874	17584
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17586	45.48	NaN	2697.7	30	0	2092.8	0.031				-1	 	0	31	346.70630548633466	691.3980580394693	2	346.70709228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12710	4874	17584
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17599	45.517	NaN	4309.9	30	0	465.12	0.214	+			13347	GKTAGKGG	8	63	338.19304889220814	674.3715448512163	2	338.1934814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GKTAGKGG_	ENST00000519932.5_1_6:112575345-112575919:-|nuORF	8.231297230196988	0.7812220690224883	4				NaN	NaN	0	NaN	12717	4880	17598
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17600	45.521	NaN	1363.9	30	0	321	0.106			+	30199	PSPPVCGG	8	40	357.1672250858383	712.3198972384766	2	357.1679382324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PSPPVCGG_	REV__ENST00000269321.11_1_17:79826257-79826755:-|nuORF	21.70233525837049	0.7917639344264583	4				NaN	NaN	0	NaN	12718	4880	17598
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17601	45.522	NaN	950.17	30	0	255.26	0.035	+			12952	GESTFKMIL	9	40	513.270603246276	NaN	0	513.2711791992188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GESTFKMIL_	ENSG00000150593|ENST00000280154|PDCD4;nc|ENSG00000150593|Q53EL6-2|PDCD4	36.446750945000026	0.29355505452396785	4				NaN	NaN	0	NaN	12719	4880	17598
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17605	45.536	NaN	2169.6	30	0	136.42	0.214	+			33816	RQSGGGSA	8	58	360.1751988210568	718.3358447089137	2	360.17559814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RQSGGGSA_	ENST00000374242.8_1_9:115480363-115480486:-|nuORF	29.14955571784316	0.7342621283720113	4				NaN	NaN	0	NaN	12720	4883	17604
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17606	45.539	NaN	1917.4	30	0	121.06	0.106	+			12837	GENSPGGGG	9	55	366.15212506641507	730.2896971996302	2	366.1531982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GENSPGGGG_	ENSG00000165506|ENST00000298292|DNAAF2;nc|ENSG00000165506|Q9NVR5-2|DNAAF2	25.450171626174864	0.5654022654467333	4				NaN	NaN	0	NaN	12721	4883	17604
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17607	45.541	NaN	2450.5	30	0	201.42	0.106				-1	PVVKCTIDN	9	55	349.1851072844356	NaN	0	349.1847839355469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_PVVKC(Carbamidomethyl (C))TIDN_	ENSG00000153107|ENST00000341068|ANAPC1;ENST00000454465.1_1_2:87398353-87423749:+|nuORF;ENST00000462785.1_1_2:112526870-112536431:-|nuORF	24.519189625965996	0.35377483217337163	4				NaN	NaN	0	NaN	12722	4883	17604
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17608	45.543	NaN	1309.6	30	0	104.71	0.036	+			43559	THTQAASLPY	10	58	544.7755784618106	NaN	0	544.7760009765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_THTQAASLPY_	ENSG00000130347|ENST00000369063|RTN4IP1;nc|ENSG00000130347|Q8WWV3-2|RTN4IP1;nc|ENSG00000130347|Q8WWV3-3|RTN4IP1	47.657333605630114	0.3204131577145918	4				NaN	NaN	0	NaN	12723	4883	17604
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17614	45.559	NaN	2473.9	30	0	245.33	0.214				-1	 	0	43	349.17733648167905	696.3401200301581	2	349.1775817871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12726	4886	17613
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17615	45.562	NaN	1328.6	30	0	95.064	0.106			+	29987	PPFLHPHQL	9	66	543.3013133879401	NaN	0	543.301513671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PPFLHPHQL_	REV__ENSG00000076201|ENST00000265562|PTPN23;REV__PTPN23|p.L1014Pfs*68|1|0.36|ENSG00000076201|chr3:47410831-47410832|-/C|frameshift_variant;REV__PTPN23|p.L1513Wfs*71|1|0.44|ENSG00000076201|chr3:47412805-47412805|G/-|frameshift_variant;REV__PTPN23|p.P1258Rfs*2|1|0.28|ENSG00000076201|chr3:47411566-47411566|C/-|frameshift_variant;REV__PTPN23|p.Y998Tfs*162|1|0.34|ENSG00000076201|chr3:47410785-47410785|C/-|frameshift_variant	35.200714571348534	0.2998460331538257	4				NaN	NaN	0	NaN	12727	4886	17613
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17616	45.564	NaN	1424.5	30	0	90.368	0.106			+	-1	MTTKNGECMKD	11	58	657.778853419942	1313.543153906684	2	657.7803955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_MTTKNGEC(Carbamidomethyl (C))MKD_	REV__ENSG00000196639|ENST00000431010|HRH1	27.047317107675042	0.7060868989289394	4				NaN	NaN	0	NaN	12728	4886	17613
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17617	45.566	NaN	1094.8	30	0	187.21	0.106				-1	 	0	43	362.65216064453125	NaN	0	362.65216064453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12729	4886	17613
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17618	45.568	NaN	2492.1	30	0	384.99	0.035			+	30172	PSGILHTLGL	10	54	504.2969233136236	NaN	0	504.3113708496094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PSGILHTLGL_	REV__ENSG00000115761|ENST00000381685|NOL10;REV__nc|ENSG00000115761|Q9BSC4-2|NOL10;REV__nc|ENSG00000115761|Q9BSC4-4|NOL10	34.172542307311794	0.38797011891751465	4				NaN	NaN	0	NaN	12730	4886	17613
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17624	45.582	NaN	2113.9	30	0	139.01	0.214	+			13104	GGDPNSAN	8	51	366.15212506641507	730.2896971996302	2	366.65252685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GGDPNSAN_	ENSG00000139200|ENST00000534837|PIANP;nc|ENSG00000139200|Q8IYJ0|PIANP;PIANP|p.H136Sfs*16|1|0.12|ENSG00000139200|chr12:6697405-6697406|-/G|frameshift_variant	23.04248740728303	0.7814162927298575	4				NaN	NaN	0	NaN	12733	4889	17623
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17625	45.586	NaN	2301	30	0	420.47	0.106			+	43662	TIYDKYNI	8	57	515.2660968558947	NaN	0	515.266357421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TIYDKYNI_	REV__ENSG00000203666|ENST00000366523|EFCAB2;REV__ENST00000495271.5_1_1:245238901-245250659:+|nuORF	63.30626980617807	1.7418937515398478	4				NaN	NaN	0	NaN	12734	4889	17623
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17626	45.588	NaN	1941	30	0	213.47	0.106			+	27802	MSEFFISTAS	10	56	560.2555776404768	1118.4966023477534	2	560.254638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MSEFFISTAS_	REV__ENSG00000176974|ENST00000316694|SHMT1;REV__ENSG00000182199|ENST00000328923|SHMT2;REV__ENST00000554467.5_1_12:57625133-57626138:+|nuORF;REV__ENST00000556825.5_1_12:57623475-57628141:+|nuORF;REV__ENST00000557348.5_1_12:57623887-57628141:+|nuORF;REV__ENST00000557433.5_1_12:57625333-57628141:+|nuORF;REV__ENST00000579558.5_1_17:18243959-18259295:-|nuORF;REV__nc|ENSG00000176974|P34896-2|SHMT1;REV__nc|ENSG00000176974|P34896-3|SHMT1;REV__nc|ENSG00000176974|P34896-4|SHMT1;REV__nc|ENSG00000182199|P34897-2|SHMT2;REV__nc|ENSG00000182199|P34897-3|SHMT2;REV__SHMT2|p.H328Tfs*8|1|0.54|ENSG00000182199|chr12:57233300-57233300|C/-|frameshift_variant	35.61828744233558	0.588957954432594	4				NaN	NaN	0	NaN	12735	4889	17623
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17627	45.59	NaN	2903.5	30	0	634.81	0.037				-1	EAAIMDIVIK	10	44	373.54407302508724	NaN	0	373.54376220703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_EAAIM(Oxidation (M))DIVIK_	EIF2AK3|p.D965Gfs*7|1|0.04|ENSG00000172071|chr2:88570965-88570966|-/GTTTTCATTAAAATAC|frameshift_variant;ENSG00000172071|ENST00000303236|EIF2AK3	36.446750945000026	0.3805027428805705	4				NaN	NaN	0	NaN	12736	4889	17623
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17631	45.603	NaN	1677.3	30	0	147.51	0.141	+			7241	DALLIHSL	8	45	441.25785353425283	880.5011541353057	2	441.2575378417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DALLIHSL_	ENSG00000124449|ENST00000244314|IRGC	79.45101966838831	0.3281480470254892	4				NaN	NaN	0	NaN	12737	4892	17630
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17642	45.651	NaN	2873.6	30	0	158.39	0.14				-1	 	0	65	413.23779873596567	824.4610445387314	2	413.2381896972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12739	4901	17641
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17646	45.667	NaN	1951.2	30	0	259.28	0.145			+	18829	IVAGNESHEML	11	74	600.2903342580672	1198.5661155829343	2	600.792724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IVAGNESHEML_	REV__CADPS2|p.D1011Nfs*3|1|0.04|ENSG00000081803|chr7:122388716-122388717|-/ATGTATT|frameshift_variant;REV__CADPS2|p.I824*|1|0.21|ENSG00000081803|chr7:122438351-122438351|G/-|frameshift_variant;REV__CADPS2|p.N1185Tfs*15|1|0.4|ENSG00000081803|chr7:122345632-122345632|T/-|frameshift_variant;REV__ENSG00000081803|ENST00000449022|CADPS2;REV__nc|ENSG00000081803|Q86UW7-2|CADPS2;REV__nc|ENSG00000081803|Q86UW7-3|CADPS2	33.921630207806714	0.6339809607503234	4				NaN	NaN	0	NaN	12740	4904	17645
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17650	45.683	NaN	2926.9	30	0	389.9	0.214	+			17382	IAMGMAQAL	9	46	453.2323885138402	904.4502240944804	2	453.2330322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IAMGMAQAL_	ENSG00000183207|ENST00000595090|RUVBL2;ENST00000594017.5_1_19:49497156-49513425:+|nuORF;ENST00000596247.5_1_19:49507512-49519096:+|nuORF;nc|ENSG00000183207|Q9Y230-2|RUVBL2	110.33723246496265	0.028653888678955353	4				NaN	NaN	0	NaN	12741	4907	17649
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17651	45.687	NaN	1650.3	30	0	128.83	0.106	+			23224	KYGPVFSF	8	53	472.7471284883255	943.479704043451	2	473.2495422363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KYGPVFSF_	CYP51A1|p.L333Wfs*13|1|0.15|ENSG00000001630|chr7:92123208-92123208|A/-|frameshift_variant;ENSG00000001630|ENST00000003100|CYP51A1	82.30502934623384	0.30436709589983096	4				NaN	NaN	0	NaN	12742	4907	17649
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17652	45.689	NaN	1190	30	0	97.844	0.035	+			38788	SSMSAQLLY	9	49	500.24393920930044	998.4733254854009	2	500.2447204589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSMSAQLLY_	ANKFY1|p.P691Rfs*61|1|0.4|ENSG00000185722|chr17:4182230-4182230|G/-|frameshift_variant;ENSG00000185722|ENST00000341657|ANKFY1;ENST00000570934.5_1_17:4098183-4145738:-|nuORF;nc|ENSG00000185722|Q9P2R3-2|ANKFY1;nc|ENSG00000185722|Q9P2R3-4|ANKFY1	47.657333605630114	0.33044192980041115	4				NaN	NaN	0	NaN	12743	4907	17649
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17660	45.718	NaN	1260.2	30	0	171.78	0.214				-1	 	0	32	318.19565942672193	634.3767659202439	2	318.1961975097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12745	4913	17659
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17661	45.722	NaN	1247.4	30	0	205.64	0.106	+			46370	VEKVVVVIL	9	53	499.33632021399234	NaN	0	499.3363952636719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VEKVVVVIL_	ENSG00000116670|ENST00000376692|MAD2L2;ENST00000376664.10_1_1:11735929-11741152:-|nuORF	25.57405402267927	0.3484490411150625	4				NaN	NaN	0	NaN	12746	4913	17659
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17662	45.724	NaN	1062.4	30	0	205.89	0.106			+	15712	GVPVWSALFD	10	55	545.7821044921875	NaN	0	545.7821044921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GVPVWSALFD_	REV__COL22A1|p.L1298Ffs*130|1|0.28|ENSG00000169436|chr8:138616034-138616034|C/-|frameshift_variant	22.579656572578934	0.4201028297492154	4				NaN	NaN	0	NaN	12747	4913	17659
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17663	45.726	NaN	1230.3	30	0	157.71	0.034	+			42501	TANSITVTF	9	48	477.25029755558234	NaN	0	477.25067138671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TANSITVTF_	ENSG00000100307|ENST00000216133|CBX7;ENST00000490741.1_1_22:39529898-39530769:-|nuORF	51.19269402634007	0.19847346126499396	4				NaN	NaN	0	NaN	12748	4913	17659
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17668	45.74	NaN	2050	30	0	162.33	0.138				-1	 	0	51	329.18010413139206	656.3456553295841	2	329.68194580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12750	4916	17667
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17673	45.756	NaN	10979	30	0	9308.5	0.214				-1	 	0	37	326.70890920472254	651.4032654762451	2	326.7093505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12752	4919	17672
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17674	45.76	NaN	1319.1	30	0	140.25	0.106				-1	 	0	36	340.1777709517112	678.3409889702224	2	340.1781921386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12753	4919	17672
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17675	45.762	NaN	1748	30	0	109.34	0.036	+			722	AEAVQKFFL	9	62	526.7917598507205	1051.568966768241	2	526.793212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEAVQKFFL_	ENSG00000173726|ENST00000366607|TOMM20	62.107414245175825	0.1960472003779324	4				NaN	NaN	0	NaN	12754	4919	17672
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17679	45.776	NaN	2492.1	30	0	228.43	0.138				-1	 	0	53	329.18010413139206	656.3456553295841	2	329.18060302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12755	4922	17678
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17687	45.808	NaN	1631.6	30	0	525.32	0.214				-1	NTCALAAVCG	10	44	346.155969624991	NaN	0	346.15570068359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_NTC(Carbamidomethyl (C))ALAAVC(Carbamidomethyl (C))G_	ENST00000540839.7_3_16:67562815-67563714:+|nuORF;ENST00000566907.1_3_16:67563306-67563714:+|nuORF	20.83715455343099	0.4201028297492154	4				NaN	NaN	0	NaN	12757	4928	17686
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17688	45.812	NaN	2858.5	30	0	577.47	0.035			+	19349	KAKPPAPLGE	10	50	336.5343705816208	NaN	0	336.53448486328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KAKPPAPLGE_	REV__ENSG00000268041|ENST00000597630|ERFL	19.996771675451527	0.4201028297492154	4				NaN	NaN	0	NaN	12758	4928	17686
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17697	45.842	NaN	5008.2	30	0	1103.7	0.214	+			41304	SVLNLVIVK	9	62	492.82590049993473	983.6372480666695	2	492.8267822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVLNLVIVK_	ENSG00000137154|ENST00000380394|RPS6;ENST00000464444.1_1_19:13005132-13005321:+|nuORF	180.86945649972546	0.001208757763874378	4				NaN	NaN	0	NaN	12761	4934	17696
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17698	45.846	NaN	1710.9	30	0	115.88	0.036	+			11970	FVNANGKLLP	10	58	536.810598394953	1071.606643856706	2	536.812744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FVNANGKLLP_	ENST00000466201.1_1_10:15145619-15151814:-|nuORF	37.15910966729921	0.575322462179216	4				NaN	NaN	0	NaN	12762	4934	17696
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17702	45.86	NaN	1263.5	30	0	469.52	0.139				-1	 	0	37	346.70630548633466	691.3980580394693	2	346.7071533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12763	4937	17701
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17710	45.892	NaN	7028.6	30	0	1302.1	0.214	+			49588	VYGFLRNGF	9	68	536.7822579139707	1071.5499628947414	2	536.78271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYGFLRNGF_	ENST00000343327.6_1_9:115030452-115095785:-|nuORF	171.38481719736927	0.0025305361306121837	4				NaN	NaN	0	NaN	12765	4943	17709
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17711	45.896	NaN	3333.5	30	0	734.69	0.106	+			2787	ARREIQTLM	9	52	373.2096116407879	1116.6070055225637	3	373.21051025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ARREIQTLM_	ENSG00000165868|ENST00000369209|HSPA12A;HSPA12A|p.D650Tfs*11|1|0.25|ENSG00000165868|chr10:116674861-116674861|C/-|frameshift_variant	24.519189625965996	0.574102787014149	4				NaN	NaN	0	NaN	12766	4943	17709
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17712	45.898	NaN	1073.2	30	0	169.69	0.034				-1	GLIMHMGL	8	41	465.23280409137413	NaN	0	465.2328186035156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))GLIMHM(Oxidation (M))GL_	ENSG00000112499|ENST00000366953|SLC22A2;ENST00000486916.5_1_6:160592405-160666544:-|nuORF;nc|ENSG00000112499|O15244-2|SLC22A2;SLC22A2|p.D374G|1|0.16|ENSG00000112499|chr6:160243730-160243730|T/C|missense_variant;SLC22A2|p.I433Lfs*17|1|0.43|ENSG00000112499|chr6:160242385-160242385|T/-|frameshift_variant	24.504012794735996	1.7418937515398478	4				NaN	NaN	0	NaN	12767	4943	17709
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17720	45.928	NaN	1052	30	0	101.81	0.214			+	35353	SAPIRKQN	8	48	457.2642155260238	912.5138781188476	2	457.2640686035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAPIRKQN_	REV__ENST00000398117.1_1_18:60986791-60986938:-|nuORF	24.20275056022122	0.7724576178584145	4				NaN	NaN	0	NaN	12769	4949	17719
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17721	45.932	NaN	807.74	30	0	41.89	0.106	+			1670	AGRVHKTT	8	42	435.2510954290494	868.4876379248989	2	435.250732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AGRVHKTT_	ENSG00000188916|ENST00000522781|INSYN2A;nc|ENSG00000188916|Q6ZSG2-2|INSYN2A	13.775330524044264	0.789990904165365	4				NaN	NaN	0	NaN	12770	4949	17719
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17722	45.934	NaN	787.63	30	0	76.807	0.035	+			11324	FLASIIFSN	9	51	506.28053724528695	NaN	0	506.2807922363281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FLASIIFSN_	ABCA13|p.A4442Pfs*3|1|0.06|ENSG00000179869|chr7:48506365-48506365|G/-|frameshift_variant;ABCA13|p.K3855Nfs*139|1|0.3|ENSG00000179869|chr7:48389131-48389153|GGCTGTGGTCCAAGACCTCAGCC/-|frameshift_variant;ENSG00000179869|ENST00000435803|ABCA13;ENST00000484268.1_1_7:48352666-48443694:+|nuORF;nc|ENSG00000179869|Q86UQ4-3|ABCA13;nc|ENSG00000179869|Q86UQ4-4|ABCA13;nc|ENSG00000179869|Q86UQ4-5|ABCA13;nc|ENSG00000179869|Q86UQ4-6|ABCA13;nc|ENSG00000179869|Q86UQ4-7|ABCA13;nc|ENSG00000179869|Q86UQ4|ABCA13	32.81241826257853	0.3119040447479903	4				NaN	NaN	0	NaN	12771	4949	17719
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17733	45.98	NaN	1056	30	0	250.49	0.143			+	23884	LDHPIVSVK	9	55	504.2977877625102	NaN	0	504.2979431152344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LDHPIVSVK_	REV__CLMN|p.H819Mfs*29|1|0.43|ENSG00000165959|chr14:95202894-95202894|G/-|frameshift_variant;REV__CLMN|p.K865Rfs*10|2|0.35|ENSG00000165959|chr14:95196612-95196612|T/-|frameshift_variant;REV__ENSG00000165959|ENST00000298912|CLMN;REV__ENST00000556454.1_1_14:95660863-95677170:-|nuORF	35.61828744233558	0.29773779453147337	4				NaN	NaN	0	NaN	12773	4958	17732
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17738	45.996	NaN	1825.2	30	0	99.425	0.214				-1	 	0	55	413.23779873596567	824.4610445387314	2	413.23834228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12775	4961	17737
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17739	46	NaN	2728.4	30	0	695.8	0.037	+			4984	ATRIGCQQLK	10	48	373.2096116407879	1116.6070055225637	3	373.544677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATRIGCQQLK_	ENSG00000143851|ENST00000691036|PTPN7;ENST00000492977.5_1_1:202119404-202127449:-|nuORF;nc|ENSG00000143851|P35236-2|PTPN7;nc|ENSG00000143851|P35236-3|PTPN7	29.170058357718403	0.6416167986984785	4				NaN	NaN	0	NaN	12776	4961	17737
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17746	46.031	NaN	1192.3	30	0	117.06	0.145	+			49815	VYSRYFTTY	9	56	600.2903342580672	1198.5661155829343	2	600.2896118164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	47.95952297671804	0.32689736945648856	4				NaN	NaN	0	NaN	12777	4967	17745
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17750	46.048	NaN	1006.8	30	0	88.201	0.138	+			20992	KKGGGAAS	8	35	338.19300375396415	674.3714545747283	2	338.1934509277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KKGGGAAS_	ENSG00000183864|ENST00000327492|TOB2;nc|ENSG00000183864|Q14106-2|TOB2	13.775330524044264	0.789990904165365	4				NaN	NaN	0	NaN	12778	4970	17749
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17756	46.066	NaN	3771	30	0	1123.9	0.144			+	-1	VCEARSLTL	9	66	545.7817218106659	1089.5488906881317	2	545.783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))VC(Carbamidomethyl (C))EARSLTL_	REV__ENST00000317552.8_1_X:10588512-10588584:-|nuORF	58.78195531508484	0.22376836668196862	4				NaN	NaN	0	NaN	12781	4973	17755
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17761	46.083	NaN	1017.5	30	0	85.204	0.214				-1	ACLACGPQ	8	48	438.68912241827803	NaN	0	438.689208984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_AC(Carbamidomethyl (C))LAC(Carbamidomethyl (C))GPQ_	AHCTF1|p.E1870Kfs*19|1|0.27|ENSG00000153207|chr1:246850426-246850426|T/-|frameshift_variant;AHCTF1|p.G1113Wfs*13|1|0.07|ENSG00000153207|chr1:246867281-246867282|-/A|frameshift_variant;ENSG00000153207|ENST00000648844|AHCTF1;nc|ENSG00000153207|Q8WYP5-2|AHCTF1;nc|ENSG00000153207|Q8WYP5-3|AHCTF1	29.841539824830324	1.7418937515398478	4				NaN	NaN	0	NaN	12783	4976	17760
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17762	46.087	NaN	1276.6	30	0	171.6	0.036			+	-1	MSTKCYLGP	9	53	528.7456756218621	NaN	0	528.74560546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_MSTKC(Carbamidomethyl (C))YLGP_	REV__AFF2|p.K978Rfs*65|1|0.46|ENSG00000155966|chrX:148966804-148966804|A/-|frameshift_variant;REV__AFF2|p.Q1237Pfs*15|1|0.14|ENSG00000155966|chrX:148987448-148987449|-/C|frameshift_variant;REV__ENSG00000155966|ENST00000370460|AFF2;REV__nc|ENSG00000155966|P51816-2|AFF2;REV__nc|ENSG00000155966|P51816-3|AFF2;REV__nc|ENSG00000155966|P51816-4|AFF2;REV__nc|ENSG00000155966|P51816-5|AFF2;REV__nc|ENSG00000155966|P51816-6|AFF2	35.61828744233558	0.29773779453147337	4				NaN	NaN	0	NaN	12784	4976	17760
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17778	46.166	NaN	1133.9	30	0	166.38	0.214			+	26929	LYGCHRGM	8	49	468.7141538782428	NaN	0	468.7143249511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LYGCHRGM_	REV__ENSG00000067057|ENST00000381125|PFKP;REV__ENSG00000141959|ENST00000349048|PFKL;REV__ENSG00000152556|ENST00000359794|PFKM;REV__ENST00000397961.6_1_21:45725201-45746742:+|nuORF;REV__ENST00000466134.5_1_21:45719988-45734072:+|nuORF;REV__ENST00000546964.5_1_12:48513149-48528944:+|nuORF;REV__nc|ENSG00000067057|Q01813-2|PFKP;REV__nc|ENSG00000141959|P17858-2|PFKL;REV__nc|ENSG00000152556|P08237-2|PFKM;REV__nc|ENSG00000152556|P08237-3|PFKM;REV__PFKL|p.P704Qfs*6|1|0.29|ENSG00000141959|chr21:44326177-44326177|C/-|frameshift_variant;REV__PFKM|p.A266Efs*59|1|0.04|ENSG00000152556|chr12:48134991-48134992|-/AGGGATTT|frameshift_variant;REV__PFKP|p.R265Gfs*2|3|0.32|ENSG00000067057|chr10:3107226-3107226|A/-|frameshift_variant	29.841539824830324	1.7418937515398478	4				NaN	NaN	0	NaN	12785	4991	17777
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17779	46.17	NaN	2672.5	30	0	534.17	0.035			+	22608	KTTKQAAFL	9	34	336.53436857899266	NaN	0	336.5345153808594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTTKQAAFL_	REV__tr|U7SWV5|U7SWV5_FUSNUBD-FAE-likedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01186PE=4SV=1	27.882242232435846	0.3367954786602879	4				NaN	NaN	0	NaN	12786	4991	17777
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17783	46.184	NaN	1110.7	30	0	99.794	0.145				-1	 	0	53	562.2925951118585	561.2853186452585	1	562.2921142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12787	4994	17782
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17793	46.234	NaN	2131.2	30	0	350.18	0.214	+			2343	AMTAARDRLL	10	44	373.20971125910285	1116.6073043775086	3	373.21014404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AMTAARDRLL_	ENST00000397827.7_1_15:30672592-30685664:-|nuORF;ENST00000570221.5_1_15:30865009-30875097:+|nuORF	23.52269567125451	0.6877354443478558	4				NaN	NaN	0	NaN	12788	5003	17792
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17794	46.237	NaN	1208	30	0	77.754	0.036	+			49589	VYGFLRNGF	9	55	536.7837869843397	NaN	0	536.7844848632812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYGFLRNGF_	ENST00000343327.6_1_9:115030452-115095785:-|nuORF	42.396135135203025	0.2590952873412954	4				NaN	NaN	0	NaN	12789	5003	17792
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17803	46.268	NaN	4012.3	30	0	272.98	0.214			+	34489	RVDRIPGG	8	65	435.2510954290494	868.4876379248989	2	435.2511291503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVDRIPGG_	REV__ENSG00000172318|ENST00000392690|B3GALT1	20.481830146152948	0.8005983782650069	4				NaN	NaN	0	NaN	12792	5009	17802
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17804	46.272	NaN	5346.3	30	0	1596.3	0.106	+			29293	NYISGIQTI	9	58	504.77128834175465	1007.5280237503093	2	504.7718505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NYISGIQTI_	ENSG00000189091|ENST00000302516|SF3B3;nc|ENSG00000189091|Q15393-3|SF3B3	101.25262130126117	0.03792372629710479	4				NaN	NaN	0	NaN	12793	5009	17802
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17805	46.274	NaN	2059.3	30	0	114.98	0.106			+	34334	RTPKKQSTAI	10	59	377.2275508215335	NaN	0	377.2274475097656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RTPKKQSTAI_	REV__ENSG00000067798|ENST00000397909|NAV3;REV__NAV3|p.K1098Nfs*81|1|0.22|ENSG00000067798|chr12:78119487-78119487|A/-|frameshift_variant;REV__NAV3|p.K1745Sfs*14|1|0.13|ENSG00000067798|chr12:78177244-78177244|C/-|frameshift_variant;REV__NAV3|p.K498Rfs*8|1|0.38|ENSG00000067798|chr12:78007026-78007026|A/-|frameshift_variant;REV__NAV3|p.L1995Sfs*5|1|0.05|ENSG00000067798|chr12:78188704-78188705|-/T|frameshift_variant;REV__NAV3|p.T2082Qfs*22|1|0.13|ENSG00000067798|chr12:78190166-78190166|A/-|frameshift_variant;REV__nc|ENSG00000067798|Q8IVL0-2|NAV3;REV__nc|ENSG00000067798|Q8IVL0-3|NAV3	31.634271133179894	0.39630454568332174	4				NaN	NaN	0	NaN	12794	5009	17802
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17806	46.276	NaN	1175	30	0	72.78	0.106	+			7808	DPLVRRSA	8	44	457.2642155260238	912.5138781188476	2	457.2637023925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DPLVRRSA_	ENST00000526183.5_1_8:145703364-145715441:+|nuORF	24.20275056022122	0.7724576178584145	4				NaN	NaN	0	NaN	12795	5009	17802
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17807	46.277	NaN	953.44	30	0	91.867	0.039	+			50972	YIKDESRNVY	10	53	643.8244195628066	NaN	0	643.8240966796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YIKDESRNVY_	ENSG00000120549|ENST00000376454|KIAA1217;KIAA1217|p.G1042Efs*92|1|0.09|ENSG00000120549|chr10:24531867-24531867|G/-|frameshift_variant;KIAA1217|p.N1661Tfs*23|1|0.07|ENSG00000120549|chr10:24544247-24544247|A/-|frameshift_variant;KIAA1217|p.Q1199Kfs*12|1|0.25|ENSG00000120549|chr10:24542749-24542749|C/-|frameshift_variant;KIAA1217|p.R976Gfs*16|1|0.31|ENSG00000120549|chr10:24527958-24527958|A/-|frameshift_variant;KIAA1217|p.R976Kfs*8|1|0.4|ENSG00000120549|chr10:24527957-24527958|-/A|frameshift_variant;KIAA1217|p.Y714Ifs*4|1|0.27|ENSG00000120549|chr10:24513391-24513392|-/A|frameshift_variant;nc|ENSG00000120549|Q5T5P2-10|KIAA1217;nc|ENSG00000120549|Q5T5P2-2|KIAA1217;nc|ENSG00000120549|Q5T5P2-7|KIAA1217;nc|ENSG00000120549|Q5T5P2-9|KIAA1217	29.170058357718403	0.40439580130713204	4				NaN	NaN	0	NaN	12796	5009	17802
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17815	46.307	NaN	1635.1	30	0	212.7	0.214	+			29338	NYTLVSHLI	9	57	530.2950912628139	1058.5756295924277	2	530.2960205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NYTLVSHLI_	ENSG00000166986|ENST00000262027|MARS1;ENST00000537638.6_1_12:57905855-57911076:+|nuORF;ENST00000548630.1_1_12:57906018-57906171:+|nuORF	101.60071028292904	0.0375685401170269	4				NaN	NaN	0	NaN	12798	5015	17814
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17816	46.311	NaN	1628.7	30	0	137.87	0.106	+			45658	TYVENLRLL	9	62	560.8221041361664	NaN	0	560.822265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TYVENLRLL_	ENSG00000054654|ENST00000555002|SYNE2;nc|ENSG00000054654|Q8WXH0|SYNE2;SYNE2|p.A5240Qfs*5|1|0.07|ENSG00000054654|chr14:64152639-64152639|G/-|frameshift_variant;SYNE2|p.D3074Ffs*8|1|0.07|ENSG00000054654|chr14:64053132-64053133|-/TTTCTTTTTCAAATACTTG|frameshift_variant;SYNE2|p.F2563Ifs*28|1|0.34|ENSG00000054654|chr14:64051593-64051594|-/A|frameshift_variant;SYNE2|p.F2840Lfs*3|1|0.38|ENSG00000054654|chr14:64052427-64052427|T/-|frameshift_variant;SYNE2|p.F4992Lfs*13|1|0.39|ENSG00000054654|chr14:64140067-64140067|T/-|frameshift_variant;SYNE2|p.K1189Sfs*4|1|0.35|ENSG00000054654|chr14:64000642-64000642|A/-|frameshift_variant;SYNE2|p.K677Nfs*30|1|0.44|ENSG00000054654|chr14:63983760-63983760|A/-|frameshift_variant;SYNE2|p.L5308Ifs*18|1|0.12|ENSG00000054654|chr14:64158750-64158751|GG/-|frameshift_variant;SYNE2|p.M1669Wfs*6|1|0.36|ENSG00000054654|chr14:64017707-64017707|A/-|frameshift_variant;SYNE2|p.N1656Mfs*19|1|0.18|ENSG00000054654|chr14:64017669-64017669|A/-|frameshift_variant;SYNE2|p.S1830Kfs*9|1|0.34|ENSG00000054654|chr14:64021985-64021986|-/A|frameshift_variant;SYNE2|p.S6651Rfs*83|1|0.29|ENSG00000054654|chr14:64220596-64220597|-/G|frameshift_variant	52.936696900407355	0.1864545979552969	4				NaN	NaN	0	NaN	12799	5015	17814
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17817	46.313	NaN	1621	30	0	182.02	0.036				-1	ILHSFNVPM	9	61	537.2781264582409	1072.5416999832817	2	537.27685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_ILHSFNVPM(Oxidation (M))_	ENSG00000089094|ENST00000377071|KDM2B;ENST00000538503.5_1_12:121882954-121987523:-|nuORF;ENST00000541318.1_1_12:121954314-121973995:-|nuORF;KDM2B|p.R1006Gfs*37|1|0.31|ENSG00000089094|chr12:121442425-121442425|G/-|frameshift_variant;nc|ENSG00000089094|Q8NHM5-2|KDM2B;nc|ENSG00000089094|Q8NHM5-3|KDM2B;nc|ENSG00000089094|Q8NHM5-4|KDM2B;nc|ENSG00000089094|Q8NHM5-5|KDM2B	47.657333605630114	0.33044192980041115	4				NaN	NaN	0	NaN	12800	5015	17814
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17827	46.345	NaN	2980.3	30	0	700.85	0.145				-1	AGRVGCKELK	10	46	373.20971125910285	1116.6073043775086	3	373.5439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_AGRVGC(Carbamidomethyl (C))KELK_	ENST00000412565.2_3_14:24024951-24025206:-|nuORF	30.317721548370564	0.6322445173429027	4				NaN	NaN	0	NaN	12804	5021	17826
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17831	46.362	NaN	2180.5	30	0	569.57	0.143	+			27278	MFVIKGLTN	9	55	511.7887036163848	1021.5628542995696	2	511.7892761230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MFVIKGLTN_	ENSG00000164808|ENST00000297423|SPIDR;ENST00000521214.5_1_8:48191985-48612988:+|nuORF;ENST00000524141.5_1_8:48173550-48625457:+|nuORF;KIAA0146-ANK1|1|fusion;KIAA0146-ANK1|2|fusion;KIAA0146-ANK1|3|fusion;KIAA0146-ANK1|4|fusion;KIAA0146-ANK1|5|fusion;nc|ENSG00000164808|Q14159-2|SPIDR;nc|ENSG00000164808|Q14159-3|SPIDR	29.14955571784316	0.5308295550522326	4				NaN	NaN	0	NaN	12805	5024	17830
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17846	46.428	NaN	2010.7	30	0	362.43	0.214	+			28115	NAIHAILLY	9	48	514.300465980192	1026.586379027184	2	514.3009033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAIHAILLY_	ENSG00000110090|ENST00000265641|CPT1A;nc|ENSG00000110090|P50416-2|CPT1A	52.29916861842294	0.2778091507991977	4				NaN	NaN	0	NaN	12808	5036	17845
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17847	46.432	NaN	948.85	30	0	102.58	0.106			+	8086	DVVNKLPEH	9	51	525.78369140625	NaN	0	525.78369140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DVVNKLPEH_	REV__EDEM3|p.R546H|1|0.45|ENSG00000116406|chr1:184711777-184711777|C/T|missense_variant	39.252832667884924	0.27938773122138094	4				NaN	NaN	0	NaN	12809	5036	17845
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17848	46.434	NaN	2098.2	30	0	432.53	0.106	+			44336	TSGITFHIL	9	57	494.77676702187307	987.5389811105462	2	494.7769775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TSGITFHIL_	ENST00000491061.1_1_7:151815642-151815978:+|nuORF	50.0245360154114	0.3026755932229825	4				NaN	NaN	0	NaN	12810	5036	17845
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17849	46.435	NaN	1049.6	30	0	82.155	0.106	+			47569	VRGPSGPR	8	46	413.2383728027344	NaN	0	413.2383728027344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VRGPSGPR_	ENST00000481424.5_1_7:99214612-99216222:+|nuORF	24.20275056022122	1.7418937515398478	4				NaN	NaN	0	NaN	12811	5036	17845
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17850	46.437	NaN	1297.4	30	0	121.53	0.038	+			49816	VYSRYFTTY	9	53	600.2904309977267	1198.5663090622534	2	600.29150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	52.936696900407355	0.27249468807391813	4				NaN	NaN	0	NaN	12812	5036	17845
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17855	46.451	NaN	1900.9	30	0	261.37	0.214				-1	CVKFIKGR	8	65	504.29520966164444	1006.5758663900889	2	504.296630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_C(Carbamidomethyl (C))VKFIKGR_	ENSG00000125900|ENST00000381623|SIRPD;ENST00000453770.1_1_20:1514156-1534896:-|nuORF	42.47446043378293	0.6409579893742323	4				NaN	NaN	0	NaN	12814	5039	17854
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17856	46.455	NaN	1399.9	30	0	279.59	0.038	+			49687	VYKIERVFL	9	45	389.5694225861929	NaN	0	389.5694885253906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYKIERVFL_	ENST00000589189.5_1_18:33289914-33290001:+|nuORF	26.69291269510374	0.34280015626154364	4				NaN	NaN	0	NaN	12815	5039	17854
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17860	46.47	NaN	1533.1	30	0	245.54	0.145	+			51608	YYTDIMHTL	9	62	578.7704307107824	1155.5263084883647	2	578.7720947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YYTDIMHTL_	ENSG00000196576|ENST00000359337|PLXNB2;ENST00000479701.5_1_22:50714135-50720918:-|nuORF	55.50420428727701	0.2510918378945873	4				NaN	NaN	0	NaN	12816	5042	17859
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17864	46.487	NaN	2346.7	30	0	931.75	0.14				-1	 	0	50	390.73324417095137	779.4519354087028	2	390.7330627441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12817	5045	17863
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17869	46.503	NaN	1921.1	30	0	317.93	0.214	+			33371	RHRQLGLQ	8	35	336.53436857899266	NaN	0	336.5341491699219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RHRQLGLQ_	ENSG00000149328|ENST00000535456|GLB1L2	18.324413293986947	1.7418937515398478	4				NaN	NaN	0	NaN	12819	5048	17868
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17870	46.507	NaN	1012.8	30	0	149.89	0.036			+	11217	FIARGDADAR	10	54	546.281982421875	NaN	0	546.281982421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FIARGDADAR_	REV__ENSG00000173992|ENST00000533244|CCS;REV__ENST00000530961.5_1_11:66372641-66373323:+|nuORF	44.377184641726394	0.34115073642966565	4				NaN	NaN	0	NaN	12820	5048	17868
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17874	46.522	NaN	1086.1	30	0	52.357	0.214			+	-1	MLLTHILGY	9	58	538.7936162547921	1075.5726795763842	2	538.7947387695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))LLTHILGY_	REV__ENSG00000184166|ENST00000641833|OR1D2	33.51558372728122	0.4900267029546261	4				NaN	NaN	0	NaN	12821	5051	17873
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17875	46.525	NaN	1068.2	30	0	150.26	0.032	+			51070	YLLVGAGA	8	34	382.2198550737149	NaN	0	382.2212829589844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YLLVGAGA_	ENSG00000182179|ENST00000333486|UBA7	33.49298260027079	1.7418937515398478	4				NaN	NaN	0	NaN	12822	5051	17873
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17893	46.604	NaN	3000.5	30	0	154.4	0.215			+	29674	PGQVARKN	8	65	435.2510954290494	868.4876379248989	2	435.2515563964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PGQVARKN_	REV__ENSG00000102524|ENST00000375887|TNFSF13B;REV__nc|ENSG00000102524|Q9Y275-2|TNFSF13B;REV__nc|ENSG00000102524|Q9Y275-3|TNFSF13B;REV__TNFSF13B|p.F194Lfs*18|1|0.19|ENSG00000102524|chr13:108303348-108303348|T/-|frameshift_variant	25.450171626174864	0.7628259754767981	4				NaN	NaN	0	NaN	12825	5066	17892
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17894	46.608	NaN	1967	30	0	230.11	0.106	+			45611	TYPSQLPSL	9	56	503.2662878996424	1004.5180228660848	2	503.26788330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TYPSQLPSL_	ENSG00000130035|ENST00000252318|GALNT8	63.53385203322761	0.18415635464017938	4				NaN	NaN	0	NaN	12826	5066	17892
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17895	46.61	NaN	1175.4	30	0	103.15	0.035			+	-1	RKMRPNPP	8	58	506.2807634919725	NaN	0	506.2811279296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_RKM(Oxidation (M))RPNPP_	REV__ENSG00000174996|ENST00000394067|KLC2;REV__nc|ENSG00000174996|Q9H0B6-2|KLC2	35.200714571348534	1.7418937515398478	4				NaN	NaN	0	NaN	12827	5066	17892
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17899	46.624	NaN	3122.1	30	0	415.71	0.214	+			10551	EYALLYHTL	9	63	561.7950249011469	1121.5754968690937	2	561.796142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EYALLYHTL_	AOC1|p.R190Gfs*18|3|0.26|ENSG00000002726|chr7:150857033-150857033|C/-|frameshift_variant;ENSG00000002726|ENST00000360937|AOC1;nc|ENSG00000002726|P19801-2|AOC1	111.64827973302667	0.027316110422332632	4				NaN	NaN	0	NaN	12828	5069	17898
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17900	46.628	NaN	1109	30	0	59.708	0.034	+			29740	PHPVLKHS	8	52	457.76581960359175	NaN	0	457.7658386230469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PHPVLKHS_	ENST00000469147.5_1_2:3471435-3471660:+|nuORF	25.450171626174864	1.7418937515398478	4				NaN	NaN	0	NaN	12829	5069	17898
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17904	46.642	NaN	1154.4	30	0	136.36	0.142			+	47118	VLNGPAAPAY	10	56	486.7618243905865	NaN	0	486.7611083984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VLNGPAAPAY_	REV__HAVCR2|p.T41A|1|0.45|ENSG00000135077|chr5:157106900-157106900|T/C|missense_variant	37.15910966729921	0.3781637092648983	4				NaN	NaN	0	NaN	12830	5072	17903
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17911	46.675	NaN	2632.6	30	0	303.91	0.143	+			29141	NVADVVIKF	9	58	502.79230916013495	1003.5700653870699	2	502.7928161621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NVADVVIKF_	ENSG00000118705|ENST00000237530|RPN2;nc|ENSG00000118705|P04844-2|RPN2	67.49366992349736	0.1516260258713357	4				NaN	NaN	0	NaN	12831	5078	17910
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17915	46.692	NaN	2581.9	30	0	735.25	0.145			+	3788	ATAGALMARQK	11	48	373.2097514228995	1116.6074248688985	3	373.2106018066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATAGALMARQK_	REV__ENSG00000113522|ENST00000378823|RAD50;REV__nc|ENSG00000113522|Q92878-2|RAD50;REV__nc|ENSG00000113522|Q92878-3|RAD50;REV__RAD50|p.K722Gfs*5|1|0.35|ENSG00000113522|chr5:132595760-132595761|AA/-|frameshift_variant;REV__RAD50|p.N934Ifs*6|1|0.26|ENSG00000113522|chr5:132608690-132608690|A/-|frameshift_variant	24.231819034082204	0.7356191775841856	4				NaN	NaN	0	NaN	12832	5081	17914
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17923	46.725	NaN	2546.7	30	0	416.19	0.214			+	11231	FIGLISTKI	9	61	496.3129422516951	990.6113315701903	2	496.3130798339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FIGLISTKI_	REV__tr|U7SWI1|U7SWI1_FUSNUCationeffluxproteincytoplasmicdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01051PE=4SV=1	54.776311868738084	0.25715957988447635	4				NaN	NaN	0	NaN	12834	5087	17922
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17924	46.728	NaN	1748.3	30	0	187.03	0.038			+	6773	CEWAFFNWR	9	62	629.7769534657513	1257.5393539983024	2	629.7774047851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_CEWAFFNWR_	REV__ENAM|p.R368C|1|0.47|ENSG00000132464|chr4:70642528-70642528|C/T|missense_variant	42.396135135203025	0.392153681582562	4				NaN	NaN	0	NaN	12835	5087	17922
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17928	46.743	NaN	2434.7	30	0	235.43	0.214	+			36727	SGVSKKGG	8	53	360.2061611600186	718.3977693868372	2	360.2067565917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SGVSKKGG_	ENST00000240185.7_1_1:11083899-11083992:+|nuORF	11.511019455917149	0.786409509643324	4				NaN	NaN	0	NaN	12836	5090	17927
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17929	46.747	NaN	1379	30	0	269.38	0.036			+	-1	RQMAMLKR	8	50	538.2957243562491	NaN	0	538.2959594726562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))RQMAMLKR_	REV__ENSG00000126945|ENST00000316594|HNRNPH2;REV__ENSG00000169045|ENST00000393432|HNRNPH1;REV__ENST00000502904.5_1_5:179043989-179045371:-|nuORF;REV__ENST00000504549.5_1_5:179044963-179045371:-|nuORF;REV__ENST00000515481.5_1_5:179044503-179045371:-|nuORF;REV__HNRNPH1|p.D196A|1|0.11|ENSG00000169045|chr5:179618273-179618273|T/G|missense_variant;REV__HNRNPH2|p.L296Yfs*20|1|0.57|ENSG00000126945|chrX:101412869-101412869|G/-|frameshift_variant	40.5726180659479	1.7418937515398478	4				NaN	NaN	0	NaN	12837	5090	17927
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17939	46.779	NaN	2356.1	30	0	413.75	0.214				-1	QMRPKDKKA	9	43	373.2097514228995	1116.6074248688985	3	373.20977783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_QM(Oxidation (M))RPKDKKA_	ENST00000497292.1_1_20:46255794-46256373:+|nuORF	24.519189625965996	0.574102787014149	4				NaN	NaN	0	NaN	12841	5096	17938
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17940	46.782	NaN	1179.4	30	0	155.9	0.034			+	42162	SYSSIYIP	8	42	465.2327796232773	NaN	0	465.2339172363281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SYSSIYIP_	REV__ENSG00000144283|ENST00000389759|PKP4;REV__ENST00000480171.7_1_2:159519375-159537186:+|nuORF;REV__nc|ENSG00000144283|Q99569-2|PKP4	21.70233525837049	1.7418937515398478	4				NaN	NaN	0	NaN	12842	5096	17938
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17951	46.829	NaN	1930.4	30	0	330.27	0.143	+			3819	ATAIFLFTK	9	48	506.2971113196828	1010.5796697061656	2	506.29742431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATAIFLFTK_	ENSG00000135220|ENST00000251566|UGT2A3	65.46538089061403	0.16805504838372562	4				NaN	NaN	0	NaN	12844	5105	17950
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17956	46.846	NaN	2504.7	30	0	652.68	0.214				-1	 	0	31	336.5338242919886	1006.5796434761658	3	336.5345153808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12846	5108	17955
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17957	46.849	NaN	957.45	30	0	74.295	0.106	+			23811	LCQIVRRF	8	50	517.7985228082086	NaN	0	517.7992553710938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LCQIVRRF_	CPED1|p.H927Tfs*4|2|0.25|ENSG00000106034|chr7:121271333-121271334|-/A|frameshift_variant;ENSG00000106034|ENST00000310396|CPED1;nc|ENSG00000106034|A4D0V7-2|CPED1	42.47446043378293	1.7418937515398478	4				NaN	NaN	0	NaN	12847	5108	17955
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17958	46.851	NaN	963.39	30	0	104.03	0.106	+			50403	YAANPGQLF	9	46	490.7454467905324	979.4763406478648	2	490.74609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YAANPGQLF_	ENSG00000168101|ENST00000304301|NUDT16L1;nc|ENSG00000168101|Q9BRJ7-2|NUDT16L1	63.30626980617807	0.18605348971131092	4				NaN	NaN	0	NaN	12848	5108	17955
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17959	46.853	NaN	869.54	30	0	121.33	0.034			+	23688	LASVDTDES	9	44	468.7136107240295	NaN	0	468.7140808105469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LASVDTDES_	REV__ENST00000393077.2_1_10:114575125-114575158:+|nuORF	23.04248740728303	0.3589936788096251	4				NaN	NaN	0	NaN	12849	5108	17955
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17966	46.884	NaN	10602	30	0	8022	0.139				-1	 	0	58	368.7194942645237	735.4244355958474	2	368.72015380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12850	5114	17965
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17978	46.921	NaN	4259	30	0	727.25	0.143				-1	 	0	59	488.7943844050025	975.574215876805	2	488.79449462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12856	5120	17977
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17984	46.94	NaN	1617.6	30	0	91.996	0.214			+	47551	VRAHTKAS	8	61	435.2510954290494	868.4876379248989	2	435.2508544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VRAHTKAS_	REV__ENSG00000197136|ENST00000355703|PCNX3;REV__nc|ENSG00000197136|Q9H6A9-2|PCNX3	18.324413293986947	0.7971860551947066	4				NaN	NaN	0	NaN	12859	5123	17983
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17985	46.943	NaN	1791.8	30	0	132.55	0.106			+	-1	EKWNINPPM	9	45	382.18853936151703	NaN	0	382.1884765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_EKWNINPPM(Oxidation (M))_	REV__CEP290|p.E1553Kfs*4|1|0.52|ENSG00000198707|chr12:88084634-88084634|T/-|frameshift_variant;REV__CEP290|p.E326Ifs*8|1|0.15|ENSG00000198707|chr12:88126402-88126405|ACTC/-|frameshift_variant;REV__CEP290|p.I2385*|1|0.37|ENSG00000198707|chr12:88050410-88050410|T/-|frameshift_variant;REV__CEP290|p.L2448Tfs*8|1|0.11|ENSG00000198707|chr12:88049282-88049283|-/T|frameshift_variant;REV__CEP290|p.M1079Cfs*9|1|0.24|ENSG00000198707|chr12:88093844-88093844|T/-|frameshift_variant;REV__CEP290|p.N212Tfs*14|4|0.21|ENSG00000198707|chr12:88130302-88130302|T/-|frameshift_variant;REV__CEP290|p.N882Ifs*10|1|0.2|ENSG00000198707|chr12:88106847-88106847|T/-|frameshift_variant;REV__CEP290|p.R2306Nfs*40|1|0.14|ENSG00000198707|chr12:88055616-88055619|TCTC/-|frameshift_variant;REV__ENSG00000198707|ENST00000552810|CEP290	37.81151784470057	0.28666463014928195	4				NaN	NaN	0	NaN	12860	5123	17983
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17986	46.945	NaN	973.9	30	0	81.467	0.106			+	18240	INVQDKLQQ	9	52	543.3020282371615	NaN	0	543.3004760742188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_INVQDKLQQ_	REV__ENSG00000107186|ENST00000319217|MPDZ;REV__MPDZ|p.K1582Rfs*7|1|0.22|ENSG00000107186|chr9:13125278-13125278|T/-|frameshift_variant;REV__MPDZ|p.K399Nfs*9|1|0.1|ENSG00000107186|chr9:13217184-13217184|T/-|frameshift_variant;REV__nc|ENSG00000107186|O75970-2|MPDZ;REV__nc|ENSG00000107186|O75970-3|MPDZ;REV__nc|ENSG00000107186|O75970-5|MPDZ	30.503639358989545	0.3235605894931338	4				NaN	NaN	0	NaN	12861	5123	17983
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17987	46.947	NaN	1246.1	30	0	163.84	0.032	+			24439	LGDDEASA	8	45	389.16497802734375	NaN	0	389.16497802734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LGDDEASA_	ENSG00000163914|ENST00000296271|RHO	26.79610172149135	1.7418937515398478	4				NaN	NaN	0	NaN	12862	5123	17983
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17993	46.963	NaN	3087	30	0	1540.1	0.139				-1	 	0	42	377.23280868250646	752.4510644318129	2	377.23309326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12865	5126	17992
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17998	46.979	NaN	2119.4	30	0	578.15	0.139	+			27072	MAGPPPST	8	49	379.1806327060432	756.3467124788864	2	379.1810302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MAGPPPST_	ENSG00000107263|ENST00000683357|RAPGEF1	52.29916861842294	0.578018602984656	4				NaN	NaN	0	NaN	12867	5129	17997
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18002	46.995	NaN	1471.5	30	0	224.99	0.214	+			45511	TYGEIFEKF	9	65	567.2789614617737	1132.5433699903474	2	567.280029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TYGEIFEKF_	ENSG00000151366|ENST00000281031|NDUFC2;nc|ENSG00000151366|O95298-2|NDUFC2	77.31757898189308	0.1091473830098891	4				NaN	NaN	0	NaN	12868	5132	18001
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18003	46.999	NaN	1093	30	0	142.81	0.106	+			47179	VLVALDHAGL	10	55	504.2974833276624	NaN	0	504.2972412109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VLVALDHAGL_	nc|ENSG00000253868|Q96M78|FER1L6-AS2	38.80614096846853	0.372755673314885	4				NaN	NaN	0	NaN	12869	5132	18001
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18004	47.001	NaN	1104.1	30	0	60.071	0.106			+	43710	TKPRLNASA	9	49	479.27718274512324	956.5398125570465	2	479.2778625488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TKPRLNASA_	REV__ENSG00000077235|ENST00000356183|GTF3C1;REV__GTF3C1|p.L1167Sfs*9|1|0.07|ENSG00000077235|chr16:27488566-27488566|G/-|frameshift_variant;REV__GTF3C1|p.P1914Qfs*30|1|0.16|ENSG00000077235|chr16:27464451-27464451|G/-|frameshift_variant;REV__GTF3C1|p.S767Vfs*7|3|0.31|ENSG00000077235|chr16:27497688-27497688|T/-|frameshift_variant;REV__GTF3C1|p.V2028Sfs*25|1|0.14|ENSG00000077235|chr16:27462329-27462329|C/-|frameshift_variant;REV__nc|ENSG00000077235|Q12789-3|GTF3C1	25.57405402267927	0.5642445186134241	4				NaN	NaN	0	NaN	12870	5132	18001
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18005	47.003	NaN	1660.1	30	0	216.12	0.036	+			19145	IYNQVNVVL	9	61	531.3031727011706	1060.5917924691412	2	531.30419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IYNQVNVVL_	ENSG00000153310|ENST00000694912|CYRIB;ENST00000523288.5_1_8:130864395-130891707:-|nuORF	79.45101966838831	0.09992237243120712	4				NaN	NaN	0	NaN	12871	5132	18001
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18013	47.033	NaN	1032.1	30	0	284.63	0.214	+			12956	GESVLKLTF	9	54	497.28437375916633	NaN	0	497.2839050292969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GESVLKLTF_	ENSG00000105856|ENST00000222574|HBP1;nc|ENSG00000105856|O60381-2|HBP1;nc|ENSG00000105856|O60381-3|HBP1	44.377184641726394	0.24544280798894275	4				NaN	NaN	0	NaN	12873	5138	18012
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18014	47.036	NaN	1013.5	30	0	71.693	0.038	+			49821	VYSRYFTTY	9	54	600.2908571473854	NaN	0	600.2903442382812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	63.53385203322761	0.134247007536971	4				NaN	NaN	0	NaN	12874	5138	18012
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18025	47.083	NaN	1604.6	30	0	99.978	0.214	+			20714	KGSAAKGT	8	50	360.2061611600186	718.3977693868372	2	360.20709228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KGSAAKGT_	ENSG00000164867|ENST00000297494|NOS3;nc|ENSG00000164867|P29474-2|NOS3;nc|ENSG00000164867|P29474-3|NOS3;NOS3|p.A641Pfs*97|1|0.11|ENSG00000164867|chr7:151006986-151006986|G/-|frameshift_variant;NOS3|p.G843Afs*115|1|0.27|ENSG00000164867|chr7:151010123-151010123|C/-|frameshift_variant	16.473147378115264	0.7942579620968672	4				NaN	NaN	0	NaN	12876	5147	18024
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18026	47.087	NaN	2263.8	30	0	1730.8	0.106				-1	 	0	31	348.7219645937619	695.4293762543239	2	348.7223815917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12877	5147	18024
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18027	47.089	NaN	1748.7	30	0	312.43	0.039				-1	CESLIYTMPW	10	64	629.7767017333701	1257.5388505335402	2	629.7774658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_CESLIYTM(Oxidation (M))PW_	ENSG00000125823|ENST00000347397|CSTL1	35.61828744233558	0.588957954432594	4				NaN	NaN	0	NaN	12878	5147	18024
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18031	47.104	NaN	1050.7	30	0	77.705	0.138				-1	 	0	36	340.2087155135301	678.4028780938602	2	340.2090759277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12879	5150	18030
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18043	47.141	NaN	1997	30	0	166.85	0.214			+	34376	RTRLPATG	8	65	457.2641951119266	912.5138372906532	2	457.26416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))RTRLPATG_	REV__ENST00000397276.6_1_14:23790934-23791447:+|nuORF;REV__ENST00000556821.5_1_14:23790934-23791033:+|nuORF	42.47446043378293	0.6409579893742323	4				NaN	NaN	0	NaN	12885	5156	18042
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18044	47.145	NaN	2754.9	30	0	665.32	0.037	+			13720	GPVVVTSS	8	51	373.2098333024263	NaN	0	373.2095031738281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GPVVVTSS_	nc|ENSG00000100987|Q9NZR4-3|VSX1	23.036711822280957	1.7418937515398478	4				NaN	NaN	0	NaN	12886	5156	18042
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18057	47.19	NaN	2016.2	30	0	424.68	0.143			+	33869	RRLLQQHG	8	32	336.53382358013437	1006.5796413406031	3	336.53399658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RRLLQQHG_	REV__ENST00000375078.3_1_1:20810205-20811795:-|nuORF	20.481830146152948	0.8005983782650069	4				NaN	NaN	0	NaN	12890	5165	18056
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18061	47.206	NaN	1193.7	30	0	164.85	0.214	+			50623	YEALLNIKV	9	56	531.8132001043234	1061.6118472754467	2	531.8126831054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YEALLNIKV_	CON__P05784;ENSG00000111057|ENST00000388835|KRT18;ENST00000397031.2_1_2:182825941-182826409:-|nuORF;ENST00000534205.1_1_11:35881882-35882566:-|nuORF;ENST00000549078.5_1_12:53344429-53346127:+|nuORF	40.77816245573522	0.41113185337114944	4				NaN	NaN	0	NaN	12891	5168	18060
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18062	47.21	NaN	688.69	30	0	81.501	0.106	+			46389	VELILHSL	8	38	462.2813972899204	922.5482416466408	2	462.28228759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VELILHSL_	tr|U7SSN5|U7SSN5_FUSNUP-typeconjugativetransferATPaseTrbBOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01515PE=3SV=1	55.50420428727701	0.5462892107279674	4				NaN	NaN	0	NaN	12892	5168	18060
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18063	47.211	NaN	774.6	30	0	51.553	0.035			+	51073	YLNLLQIL	8	43	495.3047267083971	NaN	0	495.30401611328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YLNLLQIL_	REV__ENST00000490095.5_1_3:48956369-48999072:+|nuORF	44.116797842482775	1.7418937515398478	4				NaN	NaN	0	NaN	12893	5168	18060
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18067	47.225	NaN	1222.6	30	0	103.33	0.214	+			25704	LRLYDVTF	8	52	513.784419881133	1025.5542868290659	2	513.78515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LRLYDVTF_	CNTN1|p.K576Nfs*24|1|0.13|ENSG00000018236|chr12:40959156-40959156|A/-|frameshift_variant;ENSG00000018236|ENST00000551295|CNTN1;nc|ENSG00000018236|Q12860-2|CNTN1;nc|ENSG00000018236|Q12860-3|CNTN1	35.61828744233558	0.6843154725607303	4				NaN	NaN	0	NaN	12894	5171	18066
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18068	47.229	NaN	832.51	30	0	85.071	0.035	+			49931	VYVGTLKLI	9	49	503.3212890625	NaN	0	503.3212890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYVGTLKLI_	ENSG00000162695|ENST00000357650|SLC30A7;SLC30A7|p.I358Sfs*15|1|0.24|ENSG00000162695|chr1:100965907-100965908|-/G|frameshift_variant	20.94693142431847	0.3660861156085067	4				NaN	NaN	0	NaN	12895	5171	18066
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18085	47.308	NaN	1995	30	0	266.02	0.145				-1	VQEIKLVME	9	48	368.8701477050781	NaN	0	368.8701477050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_VQEIKLVM(Oxidation (M))E_	ENSG00000107290|ENST00000224140|SETX;nc|ENSG00000107290|Q7Z333-3|SETX;nc|ENSG00000107290|Q7Z333-4|SETX;SETX|p.T2478Sfs*35|1|0.35|ENSG00000107290|chr9:132264836-132264840|TATGG/-|frameshift_variant	35.15202426646627	0.3000918603816441	4				NaN	NaN	0	NaN	12897	5186	18084
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18089	47.325	NaN	1012.3	30	0	53.628	0.141			+	49045	VVIIHSVC	8	44	435.2510489141157	NaN	0	435.251220703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVIIHSVC_	REV__ENSG00000279514|ENST00000623907|OR4C16	23.036711822280957	1.7418937515398478	4				NaN	NaN	0	NaN	12898	5189	18088
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18098	47.357	NaN	1037.2	30	0	54.902	0.142	+			51368	YTGVRIIH	8	61	479.77896650822504	NaN	0	479.7791748046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YTGVRIIH_	ENSG00000177409|ENST00000318238|SAMD9L;SAMD9L|p.N1174Tfs*28|1|0.24|ENSG00000177409|chr7:93132451-93132451|T/-|frameshift_variant	28.2542754592877	1.7418937515398478	4				NaN	NaN	0	NaN	12901	5195	18097
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18102	47.374	NaN	2571.9	30	0	491.54	0.145			+	39126	SSTVVVPG	8	43	373.2098333024263	NaN	0	373.54400634765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSTVVVPG_	REV__nc|ENSG00000100987|Q9NZR4-3|VSX1	35.200714571348534	1.7418937515398478	4				NaN	NaN	0	NaN	12902	5198	18101
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18110	47.407	NaN	920.6	30	0	271.64	0.143	+			26483	LTLPPWPAL	9	42	504.2982177734375	NaN	0	504.2982177734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LTLPPWPAL_	ENST00000320230.9_1_11:791329-791734:-|nuORF	19.996771675451527	0.3693019437812985	4				NaN	NaN	0	NaN	12904	5204	18109
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18127	47.488	NaN	2613.7	30	0	155.21	0.142			+	30325	PTRRSPSL	8	68	457.2641951119266	912.5138372906532	2	457.2642822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PTRRSPSL_	REV__ENST00000296783.7_1_5:78908565-78915435:+|nuORF;REV__ENST00000453514.5_1_5:78908565-78908769:+|nuORF;REV__ENST00000508620.5_1_5:78908565-78913389:+|nuORF	26.69291269510374	0.7532304684939817	4				NaN	NaN	0	NaN	12906	5219	18126
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18135	47.521	NaN	1078.1	30	0	91.832	0.145	+			49822	VYSRYFTTY	9	48	600.2907431258099	NaN	0	600.2913818359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	35.15202426646627	0.3000918603816441	4				NaN	NaN	0	NaN	12908	5225	18134
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18142	47.554	NaN	2438	30	0	513.25	0.143			+	3267	ASLNFSKLK	9	32	336.53391868332517	1006.5799266501756	3	336.53515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASLNFSKLK_	REV__ENSG00000164062|ENST00000296456|APEH;REV__ENST00000447541.5_1_3:49713127-49713830:+|nuORF;REV__ENST00000463616.1_1_3:49711921-49713416:+|nuORF;REV__ENST00000463995.5_1_3:49713127-49713790:+|nuORF	17.364965105453717	0.6112419832031293	4				NaN	NaN	0	NaN	12909	5231	18141
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18146	47.571	NaN	1164.1	30	0	280.93	0.145	+			32026	QRNESCGGTF	10	47	549.7358185142537	1097.4570840953072	2	549.73779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QRNESCGGTF_	CRIM1|p.P856Lfs*67|1|0.19|ENSG00000150938|chr2:36537485-36537485|C/-|frameshift_variant;ENSG00000150938|ENST00000280527|CRIM1	23.52269567125451	0.6877354443478558	4				NaN	NaN	0	NaN	12910	5234	18145
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18156	47.62	NaN	809.12	30	0	150.69	0.142	+			19056	IYGSSHSW	8	42	468.71403720490343	NaN	0	468.7140808105469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IYGSSHSW_	DUOX1|p.S186N|1|0.29|ENSG00000137857|chr15:45135535-45135535|G/A|missense_variant;ENSG00000137857|ENST00000389037|DUOX1;ENSG00000140279|ENST00000389039|DUOX2;nc|ENSG00000140279|Q9NRD8|DUOX2	50.0245360154114	1.7418937515398478	4				NaN	NaN	0	NaN	12911	5243	18155
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18164	47.653	NaN	1841.7	30	0	328.11	0.214	+			36949	SILPAIFQK	9	52	508.8106298376483	1015.6067067420967	2	508.8113708496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SILPAIFQK_	ENSG00000166471|ENST00000528080|TMEM41B;ENST00000524543.5_1_11:9304973-9316821:-|nuORF;ENST00000533867.1_1_11:9304973-9309374:-|nuORF	47.657333605630114	0.33044192980041115	4				NaN	NaN	0	NaN	12913	5249	18163
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18165	47.657	NaN	843.97	30	0	141.74	0.106	+			43385	TGFSSLFLK	9	43	500.2795846648675	NaN	0	500.2796325683594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TGFSSLFLK_	ENSG00000164880|ENST00000404767|INTS1	31.529811441608018	0.3183796599642538	4				NaN	NaN	0	NaN	12914	5249	18163
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18166	47.659	NaN	1415.3	30	0	170.64	0.036				-1	EMLPSGRGIL	10	52	544.7929237724144	1087.5712946116287	2	544.7941284179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_EM(Oxidation (M))LPSGRGIL_	ENSG00000197181|ENST00000356766|PIWIL2;nc|ENSG00000197181|Q8TC59-2|PIWIL2	37.81151784470057	0.569310847604193	4				NaN	NaN	0	NaN	12915	5249	18163
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18176	47.706	NaN	1757	30	0	178.91	0.214	+			26950	LYGQVQVF	8	46	477.25818686286595	952.5018207925319	2	477.2577209472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LYGQVQVF_	ENSG00000162408|ENST00000377705|NOL9;NOL9|p.R272Gfs*6|2|0.36|ENSG00000162408|chr1:6545111-6545111|T/-|frameshift_variant;NOL9|p.S460Afs*5|1|0.22|ENSG00000162408|chr1:6532620-6532620|T/-|frameshift_variant	60.29395666154354	0.49887135096048313	4				NaN	NaN	0	NaN	12916	5258	18175
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18177	47.71	NaN	823.11	30	0	95.95	0.106	+			23705	LATWIDKN	8	40	480.7607823471415	959.507011761083	2	480.76116943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LATWIDKN_	tr|U7T8D3|U7T8D3_FUSNURelEproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00014PE=3SV=1	35.61828744233558	0.6843154725607303	4				NaN	NaN	0	NaN	12917	5258	18175
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18178	47.711	NaN	2824.5	30	0	485.16	0.106			+	2837	ASAHKAPSHVL	11	44	373.2101850306713	NaN	0	373.2096862792969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASAHKAPSHVL_	REV__ENSG00000167077|ENST00000401548|MEI1;REV__MEI1|p.K750Rfs*6|1|0.45|ENSG00000167077|chr22:41763301-41763302|AA/-|frameshift_variant;REV__nc|ENSG00000167077|Q5TIA1-4|MEI1;REV__nc|ENSG00000167077|Q5TIA1-6|MEI1	26.69291269510374	0.4464570093767436	4				NaN	NaN	0	NaN	12918	5258	18175
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18179	47.713	NaN	960.63	30	0	154.17	0.034			+	31309	QILHAASEP	9	36	483.2562014989551	NaN	0	483.2564392089844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QILHAASEP_	REV__ENSG00000072201|ENST00000263925|LNX1;REV__nc|ENSG00000072201|Q8TBB1-2|LNX1	16.473147378115264	0.38122769658151995	4				NaN	NaN	0	NaN	12919	5258	18175
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18183	47.728	NaN	1827.4	30	0	765.73	0.143	+			17472	ICPGRLFAI	9	44	495.2835634396932	988.5525739461864	2	495.28436279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ICPGRLFAI_	ENSG00000167910|ENST00000301645|CYP7A1	31.954861631926434	0.5046124803899898	4				NaN	NaN	0	NaN	12920	5261	18182
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18203	47.825	NaN	1500.3	30	0	77.692	0.214			+	47543	VQVQVGQR	8	52	457.2641951119266	912.5138372906532	2	457.2644348144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VQVQVGQR_	REV__ENSG00000169710|ENST00000306749|FASN	18.324413293986947	0.7971860551947066	4				NaN	NaN	0	NaN	12922	5279	18202
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18204	47.829	NaN	874.5	30	0	287.17	0.035	+			21255	KLLGHRFH	8	48	504.29795106804767	NaN	0	504.2978515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KLLGHRFH_	ENSG00000130762|ENST00000378378|ARHGEF16	31.954861631926434	1.7418937515398478	4				NaN	NaN	0	NaN	12923	5279	18202
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18218	47.892	NaN	950.27	30	0	97.231	0.213	+			49823	VYSRYFTTY	9	53	600.2906224968663	NaN	0	600.291748046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	62.107414245175825	0.1403307765918332	4				NaN	NaN	0	NaN	12925	5291	18217
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18219	47.896	NaN	2015.9	30	0	388.45	0.035			+	22606	KTTKQAAFL	9	39	336.53391868332517	1006.5799266501756	3	336.53460693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTTKQAAFL_	REV__tr|U7SWV5|U7SWV5_FUSNUBD-FAE-likedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01186PE=4SV=1	40.77816245573522	0.41113185337114944	4				NaN	NaN	0	NaN	12926	5291	18217
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18223	47.911	NaN	720.26	30	0	164.27	0.142	+			20950	KKDKDKVS	8	41	474.2798156738281	NaN	0	474.2798156738281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KKDKDKVS_	ANKRD11|p.D1104Mfs*214|1|0.28|ENSG00000167522|chr16:89283233-89283233|T/-|frameshift_variant;ANKRD11|p.E1199Rfs*119|1|0.34|ENSG00000167522|chr16:89282948-89282948|T/-|frameshift_variant;ANKRD11|p.I1115Tfs*203|1|0.24|ENSG00000167522|chr16:89283198-89283198|A/-|frameshift_variant;ANKRD11|p.N452Ifs*3|1|0.39|ENSG00000167522|chr16:89285187-89285187|T/-|frameshift_variant;ENSG00000167522|ENST00000301030|ANKRD11;ENST00000567699.1_1_16:89368006-89383442:-|nuORF	18.324413293986947	1.7418937515398478	4				NaN	NaN	0	NaN	12927	5294	18222
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18230	47.944	NaN	1903.1	30	0	292.07	0.144			+	-1	HEQCTSVTH	9	66	549.7358185142537	1097.4570840953072	2	549.73583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_HEQC(Carbamidomethyl (C))TSVTH_	REV__ENSG00000080200|ENST00000389622|CRYBG3	44.377184641726394	0.36891676396732553	4				NaN	NaN	0	NaN	12928	5300	18229
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18259	48.074	NaN	1403.3	30	0	119.33	0.143			+	31924	QQLSVARSL	9	57	501.29031867440364	1000.5660844156073	2	501.29071044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QQLSVARSL_	REV__ENSG00000164329|ENST00000453514|TENT2;REV__ENST00000505571.5_1_5:78915459-78919324:+|nuORF;REV__nc|ENSG00000164329|Q6PIY7-2|TENT2	19.262678746197807	0.6112419832031293	4				NaN	NaN	0	NaN	12933	5324	18258
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18267	48.106	NaN	2223.3	30	0	359.67	0.145			+	-1	ATVLVWRLC	9	38	373.20988052180684	NaN	0	373.20989990234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_ATVLVWRLC(Carbamidomethyl (C))_	REV__ENSG00000135476|ENST00000257934|ESPL1;REV__ESPL1|p.Q1311Rfs*21|1|0.46|ENSG00000135476|chr12:53286668-53286669|AG/-|frameshift_variant;REV__nc|ENSG00000135476|Q14674-2|ESPL1	19.996771675451527	0.3693019437812985	4				NaN	NaN	0	NaN	12935	5330	18266
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18274	48.139	NaN	2268.6	30	0	414.33	0.144	+			14939	GTMEWIMIK	9	63	554.7799660933667	1107.5453792535334	2	554.7811889648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTMEWIMIK_	ENSG00000168273|ENST00000477703|UQCC5	87.69643885390035	0.07135982304947239	4				NaN	NaN	0	NaN	12936	5336	18273
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18282	48.172	NaN	1159.9	30	0	79.625	0.142			+	43541	THARKTIS	8	52	457.2641951119266	912.5138372906532	2	457.26458740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_THARKTIS_	REV__ENSG00000164548|ENST00000297071|TRA2A;REV__ENST00000494255.5_1_7:23547037-23556014:-|nuORF;REV__nc|ENSG00000164548|Q13595-2|TRA2A;REV__nc|ENSG00000164548|Q13595-3|TRA2A;REV__nc|ENSG00000164548|Q13595-4|TRA2A	24.20275056022122	0.7724576178584145	4				NaN	NaN	0	NaN	12938	5342	18281
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18286	48.189	NaN	2225	30	0	1056.9	0.14				-1	 	0	45	390.7330783986655	779.451603864131	2	390.7326354980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12939	5345	18285
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18290	48.206	NaN	2605.6	30	0	188.77	0.215	+			42148	SYQKVIELF	9	65	563.8105301395389	1125.6065073458776	2	563.8121337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SYQKVIELF_	ENSG00000168078|ENST00000301905|PBK;nc|ENSG00000168078|Q96KB5-2|PBK	88.17693792209575	0.07000514020414955	4				NaN	NaN	0	NaN	12940	5348	18289
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18291	48.209	NaN	1196.7	30	0	97.191	0.106			+	11055	FENNGVAHRI	10	55	578.7951629908326	NaN	0	578.7954711914062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FENNGVAHRI_	REV__ENSG00000164951|ENST00000297598|PDP1;REV__nc|ENSG00000164951|Q9P0J1-2|PDP1	52.936696900407355	0.28703625529470256	4				NaN	NaN	0	NaN	12941	5348	18289
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18292	48.211	NaN	1363.3	30	0	232.09	0.106	+			37491	SLKSLGFKQ	9	55	504.29801959840233	NaN	0	504.2633056640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLKSLGFKQ_	WDR11|p.N1189S|1|0.06|ENSG00000120008|chr10:120908604-120908604|A/G|missense_variant	54.776311868738084	0.17377682019723872	4				NaN	NaN	0	NaN	12942	5348	18289
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18293	48.213	NaN	1121.5	30	0	48.046	0.106			+	8069	DVLRGIRE	8	57	479.27728305873745	956.5400131842749	2	479.2777099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DVLRGIRE_	REV__ENSG00000089169|ENST00000389385|RPH3A;REV__nc|ENSG00000089169|Q9Y2J0-2|RPH3A	40.5726180659479	0.6527593143185008	4				NaN	NaN	0	NaN	12943	5348	18289
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18294	48.215	NaN	609.69	30	0	103.23	0.034				-1	ACSLEPCP	8	36	467.1934814453125	NaN	0	467.1934814453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C)	_AC(Carbamidomethyl (C))SLEPC(Carbamidomethyl (C))P_	ENSG00000160323|ENST00000355699|ADAMTS13;ENST00000485925.5_1_9:136305545-136324175:+|nuORF;nc|ENSG00000160323|Q76LX8-3|ADAMTS13;nc|ENSG00000160323|Q76LX8|ADAMTS13	19.359975847455235	1.7418937515398478	4				NaN	NaN	0	NaN	12944	5348	18289
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18298	48.229	NaN	1856.4	30	0	138.2	0.139	+			25908	LSGKSKSG	8	46	382.21967340664855	762.4247938800971	2	382.22003173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSGKSKSG_	ENSG00000159788|ENST00000336727|RGS12;ENST00000506998.5_1_4:3371967-3419414:+|nuORF;ENST00000508158.5_1_4:3386893-3430067:+|nuORF;nc|ENSG00000159788|O14924-2|RGS12;nc|ENSG00000159788|O14924-3|RGS12;nc|ENSG00000159788|O14924-4|RGS12;nc|ENSG00000159788|O14924-5|RGS12;nc|ENSG00000159788|O14924-6|RGS12;nc|ENSG00000159788|O14924-7|RGS12;RGS12|p.K1178Nfs*32|1|0.71|ENSG00000159788|chr4:3428672-3428672|A/-|frameshift_variant;RGS12|p.N1124Hfs*23|1|0.3|ENSG00000159788|chr4:3428126-3428127|AG/-|frameshift_variant;RGS12|p.Q1292Rfs*49|1|0.23|ENSG00000159788|chr4:3430704-3430704|C/-|frameshift_variant;RGS12|p.Q1363Rfs*30|1|0.3|ENSG00000159788|chr4:3430923-3430923|C/-|frameshift_variant	17.364965105453717	0.7956685240855921	4				NaN	NaN	0	NaN	12945	5351	18297
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18302	48.246	NaN	1638.7	30	0	333.95	0.143	+			10589	EYKKAKLQ	8	47	504.29801959840233	NaN	0	504.29766845703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EYKKAKLQ_	tr|U7SGL3|U7SGL3_FUSNUOutermembraneeffluxproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02229PE=3SV=1	45.9519527083369	1.7418937515398478	4				NaN	NaN	0	NaN	12946	5354	18301
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18311	48.278	NaN	1968.8	30	0	451.62	0.143	+			43345	TGATLYLLR	9	33	336.53444598713605	NaN	0	336.5342102050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TGATLYLLR_	ENSG00000189043|ENST00000339600|NDUFA4;ENST00000486007.1_1_7:10977674-10979684:-|nuORF;NDUFA4|p.A37T|1|0.4|ENSG00000189043|chr7:10938830-10938830|C/T|missense_variant	24.20275056022122	0.35506675290109213	4				NaN	NaN	0	NaN	12949	5360	18310
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18315	48.295	NaN	1205.6	30	0	64.819	0.214	+			13116	GGGGRRGGGG	10	44	394.1994934082031	NaN	0	394.1994934082031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GGGGRRGGGG_	ENSG00000183307|ENST00000331437|TMEM121B;ENST00000356692.9_1_3:73046001-73046169:+|nuORF;REV__ENSG00000183307|ENST00000331437|TMEM121B;REV__ENST00000356692.9_1_3:73046001-73046169:+|nuORF	29.14955571784316	0.4044631218331212	4				NaN	NaN	0	NaN	12950	5363	18314
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18316	48.299	NaN	1044.1	30	0	115.81	0.038	+			49824	VYSRYFTTY	9	50	600.2906027343472	NaN	0	600.2904663085938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	47.95952297671804	0.22075498469600283	4				NaN	NaN	0	NaN	12951	5363	18314
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18320	48.313	NaN	1128.7	30	0	209.61	0.143			+	-1	PYMVPVASR	9	46	518.2663259065623	1034.5180988799245	2	518.2671508789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_PYM(Oxidation (M))VPVASR_	REV__sp|P16753|SCAF_HCMVACapsidscaffoldingproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL80PE=1SV=1	42.396135135203025	0.392153681582562	4				NaN	NaN	0	NaN	12952	5366	18319
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18336	48.395	NaN	1846.2	30	0	94.041	0.144	+			6588	AYLLNLNHL	9	58	535.8034568301958	NaN	0	535.8043823242188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AYLLNLNHL_	ENSG00000067167|ENST00000262213|TRAM1;nc|ENSG00000067167|Q15629-2|TRAM1	54.776311868738084	0.17377682019723872	4				NaN	NaN	0	NaN	12953	5381	18335
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18345	48.427	NaN	2877.4	30	0	1755	0.139				-1	 	0	43	370.73539996884875	739.4562470044975	2	370.7354431152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12956	5387	18344
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18358	48.478	NaN	1432.1	30	0	116.56	0.214				-1	 	0	40	362.22186921373725	722.4291854942745	2	362.2225036621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12960	5396	18357
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18359	48.481	NaN	1506.4	30	0	174.23	0.106	+			24090	LEKGLLPIF	9	60	515.3206929008821	1028.6268328685642	2	515.3201904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LEKGLLPIF_	ENST00000285279.9_1_7:55539736-55539814:-|nuORF	53.351449002276354	0.2690372970092375	4				NaN	NaN	0	NaN	12961	5396	18357
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18360	48.483	NaN	1815.4	30	0	600.46	0.031				-1	 	0	33	356.25385609308734	710.4931592529747	2	356.2541198730469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12962	5396	18357
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18377	48.563	NaN	1867.4	30	0	84.893	0.142	+			29193	NVLRGTGGAL	10	65	479.27728305873745	956.5400131842749	2	479.2781066894531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NVLRGTGGAL_	ENSG00000151475|ENST00000281154|SLC25A31	41.42661286455405	0.5359995577334734	4				NaN	NaN	0	NaN	12964	5411	18376
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18390	48.628	NaN	2620.8	30	0	473.55	0.145	+			5163	ATSWQSVLVK	10	50	373.54404744141414	NaN	0	373.544189453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSWQSVLVK_	ENSG00000139304|ENST00000644991|PTPRQ;nc|ENSG00000139304|Q9UMZ3|PTPRQ;PTPRQ|p.K1365Rfs*5|1|0.42|ENSG00000139304|chr12:80549539-80549539|A/-|frameshift_variant;PTPRQ|p.N2031Kfs*10|1|0.46|ENSG00000139304|chr12:80652805-80652806|-/A|frameshift_variant;PTPRQ|p.Q1869Afs*5|1|0.38|ENSG00000139304|chr12:80620361-80620362|-/A|frameshift_variant;PTPRQ|p.Y1402Lfs*5|1|0.3|ENSG00000139304|chr12:80549654-80549654|A/-|frameshift_variant	33.921630207806714	0.38879399011744475	4				NaN	NaN	0	NaN	12965	5423	18389
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18394	48.645	NaN	1242.9	30	0	304.66	0.143			+	33342	RHALNLQR	8	31	336.534180757192	NaN	0	336.5340270996094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RHALNLQR_	REV__ENST00000547670.5_1_12:49494396-49503620:-|nuORF	13.775330524044264	1.7418937515398478	4				NaN	NaN	0	NaN	12966	5426	18393
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18411	48.726	NaN	885.4	30	0	97.828	0.143	+			10163	ESVLRLRE	8	49	501.2899139147285	1000.565274896257	2	501.2916564941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ESVLRLRE_	ENSG00000104517|ENST00000520539|UBR5;nc|ENSG00000104517|O95071-2|UBR5;UBR5|p.A1046Rfs*49|1|0.21|ENSG00000104517|chr8:102299518-102299519|-/G|frameshift_variant;UBR5|p.E2121Kfs*28|1|0.39|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant;UBR5|p.E2121Rfs*13|1|0.28|ENSG00000104517|chr8:102277120-102277121|-/T|frameshift_variant;UBR5|p.E310D|1|0.19|ENSG00000104517|chr8:102342641-102342641|T/A|missense_variant;UBR5|p.F2571Lfs*4|2|0.31|ENSG00000104517|chr8:102262044-102262044|A/-|frameshift_variant;UBR5|p.I1021*|1|0.41|ENSG00000104517|chr8:102300046-102300046|G/-|frameshift_variant;UBR5|p.I1021Hfs*5|1|0.23|ENSG00000104517|chr8:102300045-102300046|-/G|frameshift_variant;UBR5|p.K2120Rfs*13|1|0.24|ENSG00000104517|chr8:102277121-102277122|TT/-|frameshift_variant	26.69291269510374	0.7532304684939817	4				NaN	NaN	0	NaN	12968	5441	18410
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18419	48.759	NaN	1382.4	30	0	206.23	0.142	+			28176	NAPLVNVTL	9	44	470.7755720918997	939.5365912505994	2	470.7763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAPLVNVTL_	ENSG00000216490|ENST00000407280|IFI30;ENST00000600463.1_1_19:18285864-18288180:+|nuORF	51.19269402634007	0.2889735674168909	4				NaN	NaN	0	NaN	12970	5447	18418
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18429	48.808	NaN	2216.9	30	0	298.92	0.214				-1	RVECMLKLP	9	43	368.8694152832031	NaN	0	368.8694152832031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_RVECM(Oxidation (M))LKLP_	ENSG00000138688|ENST00000679879|BLTP1;nc|ENSG00000138688|Q2LD37-4|BLTP1;nc|ENSG00000138688|Q2LD37-7|BLTP1;nc|ENSG00000138688|Q2LD37|BLTP1	40.77816245573522	0.2702456086868081	4				NaN	NaN	0	NaN	12971	5456	18428
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18430	48.812	NaN	1858.3	30	0	173.55	0.106	+			42155	SYSMIVNNL	9	60	520.757134698849	1039.4997164644979	2	520.7581787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SYSMIVNNL_	CACYBP|p.V145Sfs*22|1|0.25|ENSG00000116161|chr1:175007191-175007191|A/-|frameshift_variant;ENSG00000116161|ENST00000367679|CACYBP;ENST00000469173.1_1_1:174976108-174977843:+|nuORF;ENST00000473925.1_1_1:174969094-174977843:+|nuORF;nc|ENSG00000116161|Q9HB71-3|CACYBP	79.45101966838831	0.09992237243120712	4				NaN	NaN	0	NaN	12972	5456	18428
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18431	48.814	NaN	1063.1	30	0	128.39	0.038	+			29725	PHMHAYYPAL	10	44	600.2892335195592	1198.5639141059182	2	600.2894897460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PHMHAYYPAL_	ENSG00000140287|ENST00000267845|HDC;ENST00000558679.1_1_15:50546296-50557931:-|nuORF;ENST00000559190.5_1_15:50545740-50555509:-|nuORF;nc|ENSG00000140287|P19113-2|HDC	26.79610172149135	0.6610034878437611	4				NaN	NaN	0	NaN	12973	5456	18428
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18442	48.86	NaN	1522	30	0	257.74	0.141	+			36715	SGTALTLIL	9	51	444.7732552279467	887.5319575226935	2	444.7734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SGTALTLIL_	ENST00000529980.5_1_11:47159254-47177376:+|nuORF	68.484700416344	0.1473408039581241	4				NaN	NaN	0	NaN	12975	5465	18441
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18451	48.893	NaN	1384.5	30	0	486.68	0.213			+	29484	PCSGLWINPLI	11	53	606.825934836886	1211.6373167405718	2	606.8261108398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PCSGLWINPLI_	REV__ENSG00000112425|ENST00000367519|EPM2A;REV__nc|ENSG00000112425|O95278-2|EPM2A;REV__nc|ENSG00000112425|O95278-7|EPM2A;REV__nc|ENSG00000112425|O95278-8|EPM2A	39.252832667884924	0.5681665794958463	4				NaN	NaN	0	NaN	12978	5471	18450
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18452	48.896	NaN	1750.7	30	0	409.97	0.036			+	51517	YVRTAGASLL	10	59	525.799934925262	1049.585316917324	2	526.3023071289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YVRTAGASLL_	REV__ENSG00000147224|ENST00000372435|PRPS1;REV__ENSG00000229937|ENST00000506618|PRPS1L1;REV__nc|ENSG00000147224|P60891-2|PRPS1	26.69291269510374	0.6618461711292317	4				NaN	NaN	0	NaN	12979	5471	18450
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18457	48.911	NaN	1610.8	30	0	74.475	0.142			+	25293	LNVRAINGT	9	61	479.27728305873745	956.5400131842749	2	479.2772521972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LNVRAINGT_	REV__ENSG00000102837|ENST00000219022|OLFM4	19.996771675451527	0.6112419832031292	4				NaN	NaN	0	NaN	12981	5474	18456
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18464	48.944	NaN	1243.4	30	0	106.37	0.142	+			28505	NHLLKALE	8	47	469.2786865234375	NaN	0	469.2786865234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NHLLKALE_	ENSG00000146918|ENST00000356309|NCAPG2;ENST00000432615.5_1_7:158447451-158457424:-|nuORF;ENST00000467785.5_1_7:158448006-158486027:-|nuORF;nc|ENSG00000146918|Q86XI2-2|NCAPG2	31.954861631926434	1.7418937515398478	4				NaN	NaN	0	NaN	12982	5480	18463
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18475	48.993	NaN	2515.1	30	0	368.27	0.143			+	3194	ASKKIEGKF	9	38	336.534180757192	NaN	0	336.5340576171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASKKIEGKF_	REV__tr|U7SUA5|U7SUA5_FUSNUOligopeptidaseFOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01160PE=3SV=1	23.04248740728303	0.3589936788096251	4				NaN	NaN	0	NaN	12984	5489	18474
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18482	49.025	NaN	938.99	30	0	142.82	0.143			+	25834	LSDRKIISN	9	51	523.3038602355573	NaN	0	523.3041381835938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSDRKIISN_	REV__ENSG00000065526|ENST00000375759|SPEN;REV__SPEN|p.A2105Lfs*33|1|0.46|ENSG00000065526|chr1:15932548-15932548|G/-|frameshift_variant;REV__SPEN|p.A2251Qfs*102|3|0.29|ENSG00000065526|chr1:15932985-15932985|C/-|frameshift_variant;REV__SPEN|p.G1860Efs*9|1|0.33|ENSG00000065526|chr1:15931816-15931816|G/-|frameshift_variant;REV__SPEN|p.N2053Tfs*11|1|0.43|ENSG00000065526|chr1:15932394-15932394|A/-|frameshift_variant;REV__SPEN|p.P2055Lfs*9|1|0.32|ENSG00000065526|chr1:15932399-15932399|C/-|frameshift_variant	24.519189625965996	0.35377483217337163	4				NaN	NaN	0	NaN	12985	5495	18481
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18489	49.059	NaN	2303.8	30	0	654	0.145	+			44145	TQHLNAHLLA	10	44	373.2098621633759	NaN	0	373.2106628417969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TQHLNAHLLA_	ENST00000510531.5_1_5:6644946-6645183:+|nuORF	21.9598887501803	0.4201028297492154	4				NaN	NaN	0	NaN	12986	5501	18488
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18493	49.075	NaN	804.79	30	0	59.258	0.143	+			11127	FFVTLGVFS	9	45	508.77459716796875	NaN	0	508.77459716796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FFVTLGVFS_	SYPL2|p.I123V|1|0.18|ENSG00000143028|chr1:109476888-109476888|A/G|missense_variant	38.80614096846853	0.28164298475537564	4				NaN	NaN	0	NaN	12987	5504	18492
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18530	49.253	NaN	687.6	30	0	47.726	0.142			+	45933	VARDREVL	8	50	479.27728305873745	956.5400131842749	2	479.2767639160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VARDREVL_	REV__ENSG00000128918|ENST00000249750|ALDH1A2;REV__ENST00000558595.5_1_15:58304322-58357848:-|nuORF;REV__ENST00000559266.5_1_15:58285255-58306437:-|nuORF;REV__nc|ENSG00000128918|O94788-2|ALDH1A2;REV__nc|ENSG00000128918|O94788-3|ALDH1A2;REV__nc|ENSG00000128918|O94788-4|ALDH1A2	17.364965105453717	0.7956685240855921	4				NaN	NaN	0	NaN	12991	5537	18529
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18534	49.27	NaN	1839.7	30	0	150.14	0.143				-1	 	0	73	501.2899792753337	1000.5654056174674	2	501.2900085449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12992	5540	18533
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18544	49.319	NaN	1183.7	30	0	698.2	0.214				-1	 	0	26	467.1926058203204	932.3706587074408	2	467.1930847167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12993	5549	18543
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18545	49.323	NaN	1033.1	30	0	92.123	0.038			+	-1	LAPSRGSMTTY	11	56	600.2894287109375	NaN	0	600.2894287109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LAPSRGSM(Oxidation (M))TTY_	REV__ENSG00000183317|ENST00000373048|EPHA10;REV__ENST00000446149.6_1_1:38181546-38201012:-|nuORF;REV__EPHA10|p.R869Gfs*10|1|0.12|ENSG00000183317|chr1:37719566-37719566|G/-|frameshift_variant;REV__nc|ENSG00000183317|Q5JZY3-3|EPHA10	40.05817265558897	0.3867246477658885	4				NaN	NaN	0	NaN	12994	5549	18543
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18558	49.371	NaN	8766.4	30	0	5902.4	0.215			+	7817	DPSDLAHY	8	50	459.2034025644338	916.3922521956677	2	459.2040710449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DPSDLAHY_	REV__CLEC16A|p.L611Wfs*11|4|0.33|ENSG00000038532|chr16:11047302-11047302|T/-|frameshift_variant;REV__CLEC16A|p.Y604Ifs*18|1|0.23|ENSG00000038532|chr16:11044063-11044063|T/-|frameshift_variant;REV__ENSG00000038532|ENST00000409790|CLEC16A;REV__ENST00000476025.5_1_16:11118684-11133620:+|nuORF;REV__ENST00000487189.5_1_16:11118684-11138007:+|nuORF;REV__nc|ENSG00000038532|Q2KHT3-2|CLEC16A	19.359975847455235	0.7988239741663654	4				NaN	NaN	0	NaN	12998	5558	18557
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18559	49.375	NaN	2037.4	30	0	316.64	0.106				-1	 	0	36	336.5337191351705	1006.5793280057114	3	336.5341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12999	5558	18557
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18560	49.376	NaN	1368.8	30	0	103.28	0.035			+	34130	RSTEVVNLK	9	59	523.3038602355573	NaN	0	523.3037719726562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RSTEVVNLK_	REV__ENSG00000162782|ENST00000444136|TDRD5;REV__nc|ENSG00000162782|Q8NAT2|TDRD5;REV__TDRD5|p.K412Nfs*17|1|0.14|ENSG00000162782|chr1:179634560-179634560|A/-|frameshift_variant	26.69291269510374	0.34280015626154364	4				NaN	NaN	0	NaN	13000	5558	18557
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18581	49.428	NaN	2550.2	30	0	558.2	0.214			+	29850	PLAVTASS	8	40	373.20977575146395	NaN	0	373.20977783203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PLAVTASS_	REV__ENSG00000127124|ENST00000372583|HIVEP3;REV__HIVEP3|p.G2228Vfs*5|1|0.27|ENSG00000127124|chr1:41510989-41510989|C/-|frameshift_variant;REV__nc|ENSG00000127124|Q5T1R4-2|HIVEP3	28.2542754592877	1.7418937515398478	4				NaN	NaN	0	NaN	13015	5564	18580
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18582	49.432	NaN	1242.2	30	0	347.24	0.106	+			25650	LQVKFSGTK	9	49	504.29769047703394	NaN	0	504.2969055175781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LQVKFSGTK_	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42|TTN;TTN|p.A12650Gfs*4|1|0.4|ENSG00000155657|chr2:178633489-178633490|-/T|frameshift_variant;TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;TTN|p.A7105Cfs*8|1|0.32|ENSG00000155657|chr2:178722523-178722524|-/A|frameshift_variant;TTN|p.D20259Rfs*40|1|0.44|ENSG00000155657|chr2:178583105-178583106|-/T|frameshift_variant;TTN|p.D21555Ifs*6|1|0.33|ENSG00000155657|chr2:178576659-178576659|G/-|frameshift_variant;TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;TTN|p.D9026Afs*9|1|0.26|ENSG00000155657|chr2:178711205-178711208|CTGT/-|frameshift_variant;TTN|p.E15132Sfs*22|1|0.27|ENSG00000155657|chr2:178612094-178612094|C/-|frameshift_variant;TTN|p.E20392Dfs*6|1|0.04|ENSG00000155657|chr2:178582357-178582358|-/TTTAAAATTA|frameshift_variant;TTN|p.E20392Kfs*4|1|0.02|ENSG00000155657|chr2:178582359-178582360|-/TTTT|frameshift_variant;TTN|p.E9224Gfs*8|1|0.04|ENSG00000155657|chr2:178709697-178709698|-/TCTTATGATATCTTGAC|frameshift_variant;TTN|p.F18705Lfs*8|1|0.37|ENSG00000155657|chr2:178590687-178590687|A/-|frameshift_variant;TTN|p.G12742Vfs*2|1|0.05|ENSG00000155657|chr2:178632983-178632983|C/-|frameshift_variant;TTN|p.G14712Dfs*11|1|0.37|ENSG00000155657|chr2:178614341-178614341|G/-|frameshift_variant;TTN|p.G19920Afs*12|1|0.42|ENSG00000155657|chr2:178584961-178584961|G/-|frameshift_variant;TTN|p.G22029Efs*22|2|0.13|ENSG00000155657|chr2:178575125-178575125|T/-|frameshift_variant;TTN|p.I10495Nfs*4|1|0.37|ENSG00000155657|chr2:178685288-178685289|-/T|frameshift_variant;TTN|p.I24998Nfs*2|1|0.35|ENSG00000155657|chr2:178566216-178566217|-/T|frameshift_variant;TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;TTN|p.I9225Cfs*34|1|0.06|ENSG00000155657|chr2:178709695-178709696|-/ATATCCATGAGCA|frameshift_variant;TTN|p.K10923Rfs*104|2|0.23|ENSG00000155657|chr2:178679362-178679362|T/-|frameshift_variant;TTN|p.K11381Nfs*25|1|0.07|ENSG00000155657|chr2:178671133-178671133|T/-|frameshift_variant;TTN|p.K11556Sfs*15|1|0.39|ENSG00000155657|chr2:178652287-178652287|T/-|frameshift_variant;TTN|p.K14271Qfs*5|1|0.02|ENSG00000155657|chr2:178617351-178617352|-/G|frameshift_variant;TTN|p.K26626Nfs*34|1|0.34|ENSG00000155657|chr2:178561331-178561331|T/-|frameshift_variant;TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant;TTN|p.L7142*|1|0.06|ENSG00000155657|chr2:178722407-178722411|TCTTA/-|frameshift_variant;TTN|p.N13487Tfs*49|1|0.34|ENSG00000155657|chr2:178621335-178621335|T/-|frameshift_variant;TTN|p.N15496Ifs*16|1|0.09|ENSG00000155657|chr2:178610116-178610116|T/-|frameshift_variant;TTN|p.N6458Mfs*74|1|0.44|ENSG00000155657|chr2:178725998-178725998|T/-|frameshift_variant;TTN|p.N7648Tfs*27|1|0.32|ENSG00000155657|chr2:178719598-178719598|T/-|frameshift_variant;TTN|p.N8964Tfs*27|1|0.11|ENSG00000155657|chr2:178711988-178711988|T/-|frameshift_variant;TTN|p.P16126Rfs*3|1|0.25|ENSG00000155657|chr2:178607301-178607302|TG/-|frameshift_variant;TTN|p.P22810Hfs*10|1|0.03|ENSG00000155657|chr2:178572780-178572781|-/AAAT|frameshift_variant;TTN|p.V10632Yfs*16|1|0.16|ENSG00000155657|chr2:178683254-178683254|T/-|frameshift_variant;TTN|p.V11008Sfs*13|1|0.33|ENSG00000155657|chr2:178678146-178678147|-/T|frameshift_variant;TTN|p.V11345Ffs*4|1|0.4|ENSG00000155657|chr2:178672044-178672044|T/-|frameshift_variant;TTN|p.V13823*|1|0.28|ENSG00000155657|chr2:178620027-178620027|C/-|frameshift_variant;TTN|p.V22573Cfs*4|2|0.31|ENSG00000155657|chr2:178573492-178573492|C/-|frameshift_variant;TTN|p.V27442Cfs*4|1|0.05|ENSG00000155657|chr2:178558107-178558108|-/A|frameshift_variant;TTN|p.W5728Mfs*3|1|0.07|ENSG00000155657|chr2:178730267-178730268|-/T|frameshift_variant	37.15910966729921	0.2899585034171616	4				NaN	NaN	0	NaN	13016	5564	18580
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18583	49.434	NaN	938.58	30	0	129.81	0.034	+			45947	VASEASKKK	9	48	474.2793763507628	946.5441997683256	2	474.27899169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VASEASKKK_	ENSG00000078043|ENST00000585916|PIAS2;ENST00000590127.5_1_18:44407908-44497416:-|nuORF;nc|ENSG00000078043|O75928-2|PIAS2	34.172542307311794	0.4838870758800184	4				NaN	NaN	0	NaN	13017	5564	18580
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18594	49.459	NaN	3061.7	30	0	1741.1	0.214			+	2763	ARKKHAGG	8	46	412.7455716203153	823.4765903074306	2	412.7457275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ARKKHAGG_	REV__ENSG00000158987|ENST00000509018|RAPGEF6;REV__nc|ENSG00000158987|Q8TEU7-2|RAPGEF6;REV__nc|ENSG00000158987|Q8TEU7-3|RAPGEF6;REV__nc|ENSG00000158987|Q8TEU7-4|RAPGEF6;REV__nc|ENSG00000158987|Q8TEU7-5|RAPGEF6;REV__RAPGEF6|p.L1388*|1|0.25|ENSG00000158987|chr5:131431161-131431161|A/-|frameshift_variant;REV__RAPGEF6|p.R1091H|1|0.06|ENSG00000158987|chr5:131446632-131446632|C/T|missense_variant	13.775330524044264	0.789990904165365	4				NaN	NaN	0	NaN	13025	5567	18593
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18595	49.463	NaN	3486.3	30	0	2629.6	0.03				-1	 	0	32	318.1224733278378	634.2303937224756	2	318.1225891113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13026	5567	18593
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18606	49.488	NaN	2656.9	30	0	1779.9	0.214				-1	 	0	25	310.1329520549926	618.2513511767852	2	310.1337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13034	5570	18605
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18607	49.492	NaN	1371	30	0	374.22	0.106			+	9755	ENGNEEEQ	8	48	474.68039282143513	947.3462327096703	2	474.6803894042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ENGNEEEQ_	REV__ENSG00000164334|ENST00000695508|FAM170A;REV__nc|ENSG00000164334|A1A519-2|FAM170A;REV__nc|ENSG00000164334|A1A519-3|FAM170A	15.641811463095205	0.7929430624199021	4				NaN	NaN	0	NaN	13035	5570	18605
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18608	49.494	NaN	1525.5	30	0	94.737	0.036			+	46259	VEGATNALAIL	11	58	536.3049174497511	1070.595281966302	2	536.30615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VEGATNALAIL_	REV__ANAPC4|p.R419Sfs*21|1|0.18|ENSG00000053900|chr4:25403004-25403005|-/T|frameshift_variant;REV__ENSG00000053900|ENST00000315368|ANAPC4;REV__nc|ENSG00000053900|Q9UJX5-2|ANAPC4;REV__nc|ENSG00000053900|Q9UJX5-3|ANAPC4	60.11826168202944	0.32239947305776	4				NaN	NaN	0	NaN	13036	5570	18605
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18619	49.519	NaN	1522.5	30	0	169.71	0.145			+	-1	VKKDQIDML	9	38	369.20392870977656	NaN	0	368.86944580078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_VKKDQIDM(Oxidation (M))L_	REV__ENSG00000042781|ENST00000307340|USH2A;REV__nc|ENSG00000042781|O75445-3|USH2A	34.172542307311794	0.30503706118289736	4				NaN	NaN	0	NaN	13044	5573	18618
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18656	49.62	NaN	2660.8	30	0	161.76	0.214				-1	 	0	72	501.2899792753337	1000.5654056174674	2	501.29046630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13069	5585	18655
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18657	49.623	NaN	1528.2	30	0	183.82	0.037				-1	LPRVLCTCC	9	64	561.2662353515625	NaN	0	561.2662353515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_LPRVLC(Carbamidomethyl (C))TC(Carbamidomethyl (C))C_	ENST00000582583.4_1_17:20885020-20885254:+|nuORF	30.503639358989545	0.3235605894931338	4				NaN	NaN	0	NaN	13070	5585	18655
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18676	49.67	NaN	82282	30	0	70846	0.142				-1	 	0	57	467.1926058203204	932.3706587074408	2	467.1928405761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13083	5591	18675
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18687	49.697	NaN	1231.5	30	0	125.23	0.145	+			49825	VYSRYFTTY	9	58	600.2902681220786	NaN	0	600.2892456054688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	45.97224482568171	0.23445038899310136	4				NaN	NaN	0	NaN	13091	5594	18686
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18697	49.723	NaN	32282	30	0	23667	0.206			+	613	ADSNDPLW	8	63	459.2034025644338	916.3922521956677	2	459.20404052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ADSNDPLW_	REV__ENSG00000104804|ENST00000221399|TULP2	20.481830146152948	0.8005983782650069	4				NaN	NaN	0	NaN	13098	5597	18696
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18698	49.726	NaN	2178.1	30	0	351.04	0.106				-1	 	0	30	336.5337191351705	1006.5793280057114	3	336.5343017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13099	5597	18696
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18699	49.728	NaN	1399.9	30	0	440.7	0.035			+	-1	ICSGCCCM	8	44	495.6525765566944	NaN	0	495.65234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	3 Carbamidomethyl (C)	_IC(Carbamidomethyl (C))SGC(Carbamidomethyl (C))CC(Carbamidomethyl (C))M_	REV__ENST00000579018.5_2_17:71084805-71087985:-|nuORF	14.664097394203935	1.7418937515398478	4				NaN	NaN	0	NaN	13100	5597	18696
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18710	49.754	NaN	1847	30	0	790.8	0.14			+	22225	KSVVLAAP	8	44	392.74855816998814	NaN	0	392.74835205078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSVVLAAP_	REV__ENSG00000084444|ENST00000197268|FAM234B	19.359975847455235	1.7418937515398478	4				NaN	NaN	0	NaN	13108	5600	18709
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18721	49.781	NaN	3878.1	30	0	2564.3	0.214	+			27543	MPDGGHCR	8	44	436.679011803092	871.343470672984	2	436.6794128417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MPDGGHCR_	ENST00000590135.5_1_19:36235145-36235544:-|nuORF	12.959181472943097	0.7887000251064199	4				NaN	NaN	0	NaN	13116	5603	18720
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18722	49.785	NaN	3296.2	30	0	2517.6	0.106				-1	CFICGIGS	8	34	428.6887717895587	855.3629906459174	2	428.6909484863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_C(Carbamidomethyl (C))FICGIGS_	ENSG00000196218|ENST00000359596|RYR1;nc|ENSG00000196218|P21817-2|RYR1;nc|ENSG00000196218|P21817-3|RYR1	15.63621529709179	0.7929342111279789	4				NaN	NaN	0	NaN	13117	5603	18720
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18723	49.787	NaN	2470.5	30	0	765.71	0.106	+			7586	DIMLVTSLNL	10	41	373.5437833205089	NaN	0	373.5440673828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DIMLVTSLNL_	tr|U7SLK8|U7SLK8_FUSNUPolysaccharidebiosynthesisproteinC-terminaldomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01961PE=4SV=1	20.94693142431847	0.4201028297492154	4				NaN	NaN	0	NaN	13118	5603	18720
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18724	49.788	NaN	1339.9	30	0	329.18	0.035	+			20856	KILSRVYE	8	54	504.29769047703394	NaN	0	504.2974853515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KILSRVYE_	ENSG00000237765|ENST00000422728|FAM200B	53.351449002276354	1.7418937515398478	4				NaN	NaN	0	NaN	13119	5603	18720
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18733	49.81	NaN	5060.9	30	0	2035.6	0.214			+	39107	SSTCESMF	8	42	446.1640848711497	890.3136168090995	2	446.1655578613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSTCESMF_	REV__ENST00000373953.7_1_6:35227481-35248953:+|nuORF;REV__ENST00000469195.5_3_6:35227376-35248953:+|nuORF;REV__ENST00000491400.5_1_6:35226936-35248953:+|nuORF	20.481830146152948	0.8005983782650069	4				NaN	NaN	0	NaN	13125	5606	18732
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18734	49.814	NaN	3289.7	30	0	2407.8	0.106				-1	 	0	29	318.1224733278378	634.2303937224756	2	318.12298583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13126	5606	18732
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18735	49.815	NaN	1804.5	30	0	610.1	0.031			+	10903	FDGGGGGGT	9	50	362.64797212999076	723.2813913267815	2	362.64892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FDGGGGGGT_	REV__ENSG00000245848|ENST00000498907|CEBPA;REV__nc|ENSG00000245848|P49715-2|CEBPA;REV__nc|ENSG00000245848|P49715-4|CEBPA	12.206847966760668	0.6112419832031292	4				NaN	NaN	0	NaN	13127	5606	18732
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18744	49.84	NaN	2866.8	30	0	457.03	0.214				-1	VCNCSAPDTGN	11	60	597.7286491065521	1193.442745279904	2	597.7296752929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_VC(Carbamidomethyl (C))NC(Carbamidomethyl (C))SAPDTGN_	ENSG00000111271|ENST00000313698|ACAD10;ENST00000413681.7_1_12:112130513-112186840:+|nuORF;ENST00000508303.5_1_12:112159488-112186840:+|nuORF;nc|ENSG00000111271|Q6JQN1-2|ACAD10;nc|ENSG00000111271|Q6JQN1-3|ACAD10;nc|ENSG00000111271|Q6JQN1-5|ACAD10	20.83715455343099	0.7712264395190968	4				NaN	NaN	0	NaN	13133	5609	18743
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18745	49.844	NaN	3530.7	30	0	712.84	0.038			+	-1	ECFSSDCSFQ	10	50	605.2126622561116	1208.410771579023	2	605.716552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_ECFSSDC(Carbamidomethyl (C))SFQ_	REV__ENST00000389682.7_1_2:122524444-122524561:+|nuORF	25.57405402267927	0.6709832231498071	4				NaN	NaN	0	NaN	13134	5609	18743
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18756	49.87	NaN	4631.4	30	0	1492.4	0.214			+	-1	CVCNGQICR	9	45	555.2362239487952	1108.4578949643903	2	555.2372436523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))VCNGQIC(Carbamidomethyl (C))R_	REV__ENSG00000189056|ENST00000428762|RELN;REV__nc|ENSG00000189056|P78509-2|RELN;REV__nc|ENSG00000189056|P78509-3|RELN;REV__RELN|p.H3353Tfs*46|1|0.25|ENSG00000189056|chr7:103483777-103483777|G/-|frameshift_variant	24.20275056022122	0.577060078256802	4				NaN	NaN	0	NaN	13142	5612	18755
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18757	49.873	NaN	5621.3	30	0	1718.8	0.106				-1	EYSYGIKMS	9	47	547.2462234495948	1092.4778939659896	2	547.2487182617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_EYSYGIKM(Oxidation (M))S_	ARHGAP20|p.P263S|1|0.27|ENSG00000137727|chr11:110606738-110606738|G/A|missense_variant	34.172542307311794	0.4838870758800184	4				NaN	NaN	0	NaN	13143	5612	18755
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18758	49.875	NaN	2595.9	30	0	359.83	0.106			+	-1	MTMGSSGDHEI	11	53	590.7352923877039	1179.4560318422077	2	590.736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_MTM(Oxidation (M))GSSGDHEI_	REV__ENSG00000005889|ENST00000304543|ZFX;REV__nc|ENSG00000005889|P17010-3|ZFX;REV__ZFX|p.G514Efs*21|1|0.32|ENSG00000005889|chrX:24210493-24210493|A/-|frameshift_variant	30.317721548370564	0.6717830234747728	4				NaN	NaN	0	NaN	13144	5612	18755
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18759	49.877	NaN	959.06	30	0	611.77	0.106				-1	 	0	21	310.1329520549926	618.2513511767852	2	310.1336364746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13145	5612	18755
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18760	49.879	NaN	1956.4	30	0	275.55	0.106				-1	ETMCGCSGE	9	42	495.1547908885404	988.2950288438808	2	495.1565856933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C),Oxidation (M)	_ETM(Oxidation (M))C(Carbamidomethyl (C))GCSGE_	ENST00000595822.1_1_19:47440583-47491508:+|nuORF	18.324413293986947	0.6112419832031293	4				NaN	NaN	0	NaN	13146	5612	18755
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18761	49.881	NaN	1931.2	30	0	479.82	0.037			+	-1	PMCPVCVGEE	10	50	568.725873903437	NaN	0	568.72607421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),Oxidation (M)	_PM(Oxidation (M))C(Carbamidomethyl (C))PVCVGEE_	REV__ENSG00000184956|ENST00000421673|MUC6;REV__MUC6|p.N1717Tfs*10|1|0.03|ENSG00000184956|chr11:1017653-1017653|G/-|frameshift_variant;REV__MUC6|p.P1246Lfs*47|1|0.2|ENSG00000184956|chr11:1020161-1020161|G/-|frameshift_variant	23.04248740728303	0.42010282974921537	4				NaN	NaN	0	NaN	13147	5612	18755
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18762	49.881	NaN	1024.5	30	0	122.89	0.14			+	7145	DADQQDEQ	8	48	474.68039282143513	947.3462327096703	2	474.6801452636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DADQQDEQ_	REV__ENSG00000168404|ENST00000308807|MLKL;REV__nc|ENSG00000168404|Q8NB16-2|MLKL	18.324413293986947	0.7971860551947066	4				NaN	NaN	0	NaN	13148	5612	18755
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18773	49.909	NaN	1291.6	30	0	169.17	0.214				-1	EKCMGTGYIG	10	47	558.2477693167287	NaN	0	558.2469482421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_EKC(Carbamidomethyl (C))MGTGYIG_	tr|U7T123|U7T123_FUSNUGeneralsecretionpathwayproteinEOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00776PE=3SV=1	20.94693142431847	0.4201028297492154	4				NaN	NaN	0	NaN	13156	5615	18772
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18774	49.912	NaN	1698	30	0	135.69	0.037			+	43300	TFSLFKVYT	9	42	369.2032021022288	1104.5877769068863	3	368.8692932128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TFSLFKVYT_	REV__ENST00000467604.5_1_3:118931398-118931611:-|nuORF	19.1035232394073	0.6112419832031293	4				NaN	NaN	0	NaN	13157	5615	18772
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18790	49.956	NaN	1842.5	30	0	367.45	0.145	+			11896	FTTDEEEEQ	9	48	564.2210668605886	1126.4275807879771	2	564.723876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FTTDEEEEQ_	ENSG00000116885|ENST00000235532|OSCP1;nc|ENSG00000116885|Q8WVF1|OSCP1	16.473147378115264	0.6112419832031293	4				NaN	NaN	0	NaN	13167	5621	18789
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18797	49.977	NaN	1667.4	30	0	108.76	0.214				-1	 	0	60	501.2899792753337	1000.5654056174674	2	501.290283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13171	5624	18796
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18798	49.98	NaN	789.67	30	0	104.43	0.034	+			21808	KRAVIMMV	8	42	474.2791127588664	NaN	0	474.2793273925781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KRAVIMMV_	ENSG00000186867|ENST00000394427|QRFPR;QRFPR|p.K375Vfs*18|1|0.4|ENSG00000186867|chr4:121329486-121329487|TT/-|frameshift_variant	33.51558372728122	1.7418937515398478	4				NaN	NaN	0	NaN	13172	5624	18796
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18806	50	NaN	2075.3	30	0	326.56	0.145			+	-1	YCNVGCCSGH	10	48	607.2143001967308	1212.4140474602616	2	607.2150268554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	3 Carbamidomethyl (C)	_YC(Carbamidomethyl (C))NVGC(Carbamidomethyl (C))C(Carbamidomethyl (C))SGH_	REV__ENST00000510134.6_1_12:10746401-10750756:-|nuORF;REV__ENST00000535939.5_2_12:10746401-10750756:-|nuORF	14.864876125193954	0.7409144161711139	4				NaN	NaN	0	NaN	13177	5627	18805
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18817	50.028	NaN	8533.6	30	0	6922.2	0.142				-1	 	0	40	467.1926058203204	932.3706587074408	2	467.19287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13185	5630	18816
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18826	50.064	NaN	2040.8	30	0	339.58	0.214				-1	 	0	29	336.5337191351705	1006.5793280057114	3	336.5338439941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13188	5636	18825
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18827	50.067	NaN	1004.9	30	0	170.17	0.034	+			47073	VLIENVASL	9	46	479.2832519332195	NaN	0	479.2835388183594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VLIENVASL_	ENSG00000176153|ENST00000389614|GPX2;GPX2|p.W152*|1|0.31|ENSG00000176153|chr14:64939605-64939605|C/-|frameshift_variant	60.11826168202944	0.14881452885248947	4				NaN	NaN	0	NaN	13189	5636	18825
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18832	50.082	NaN	659.21	30	0	180.51	0.142	+			46252	VEETCLSH	8	39	459.2041164241001	NaN	0	459.20404052734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VEETCLSH_	CCDC168|p.A3265Vfs*21|1|0.06|ENSG00000175820|chr13:102740903-102740904|-/GAAGAAAAATATA|frameshift_variant;CCDC168|p.A4132Qfs*29|1|0.23|ENSG00000175820|chr13:102738304-102738304|T/-|frameshift_variant;CCDC168|p.F3005Lfs*18|2|0.31|ENSG00000175820|chr13:102741682-102741682|A/-|frameshift_variant;CCDC168|p.G4714Rfs*2|1|0.22|ENSG00000175820|chr13:102736557-102736558|-/T|frameshift_variant;CCDC168|p.G6141Lfs*25|1|0.03|ENSG00000175820|chr13:102732276-102732277|-/AGGAAAAATCACCAAACACTAG|frameshift_variant;CCDC168|p.I1655Nfs*8|1|0.07|ENSG00000175820|chr13:102745733-102745734|-/AACTTAAAACAAT|frameshift_variant;CCDC168|p.K5937Nfs*10|1|0.37|ENSG00000175820|chr13:102732886-102732886|T/-|frameshift_variant;CCDC168|p.K6236Nfs*3|1|0.42|ENSG00000175820|chr13:102731989-102731989|T/-|frameshift_variant;CCDC168|p.L3176Ifs*8|1|0.42|ENSG00000175820|chr13:102741171-102741172|-/T|frameshift_variant;CCDC168|p.L5048Ifs*6|1|0.12|ENSG00000175820|chr13:102735555-102735556|-/T|frameshift_variant;CCDC168|p.L5234*|1|0.12|ENSG00000175820|chr13:102735001-102735001|A/-|frameshift_variant;CCDC168|p.L758Wfs*27|1|0.11|ENSG00000175820|chr13:102748424-102748424|A/-|frameshift_variant;CCDC168|p.M1116Nfs*6|1|0.25|ENSG00000175820|chr13:102747350-102747351|-/T|frameshift_variant;CCDC168|p.M1116Wfs*8|1|0.14|ENSG00000175820|chr13:102747351-102747351|T/-|frameshift_variant;CCDC168|p.M5025Cfs*8|1|0.29|ENSG00000175820|chr13:102735624-102735624|T/-|frameshift_variant;CCDC168|p.N1192Tfs*3|1|0.1|ENSG00000175820|chr13:102747122-102747122|T/-|frameshift_variant;CCDC168|p.N2119Kfs*18|1|0.41|ENSG00000175820|chr13:102744340-102744341|-/T|frameshift_variant;CCDC168|p.T2792Dfs*27|1|0.25|ENSG00000175820|chr13:102742324-102742325|-/T|frameshift_variant;CCDC168|p.T4543Lfs*5|1|0.1|ENSG00000175820|chr13:102737070-102737070|T/-|frameshift_variant;ENSG00000175820|ENST00000322527|CCDC168	30.503639358989545	1.7418937515398478	4				NaN	NaN	0	NaN	13191	5639	18831
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18836	50.099	NaN	1330.3	30	0	114.43	0.214				-1	CREKGKLKA	9	61	545.3162631113515	NaN	0	545.31591796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_C(Carbamidomethyl (C))REKGKLKA_	ENSG00000132952|ENST00000255304|USPL1	26.69291269510374	0.34280015626154364	4				NaN	NaN	0	NaN	13192	5642	18835
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18837	50.103	NaN	1318.8	30	0	367.9	0.033	+			519	ACQNGGTCH	9	40	445.6660001683019	NaN	0	445.6654357910156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ACQNGGTCH_	ENSG00000148400|ENST00000651671|NOTCH1;NOTCH1|p.Q2403Sfs*19|1|0.51|ENSG00000148400|chr9:136496532-136496532|G/-|frameshift_variant;NOTCH1|p.Y813Vfs*15|1|0.06|ENSG00000148400|chr9:136513051-136513052|-/C|frameshift_variant	10.865556482863946	0.40020666175442315	4				NaN	NaN	0	NaN	13193	5642	18835
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18841	50.118	NaN	1526.4	30	0	596	0.141				-1	GHCCKPGG	8	43	436.679011803092	871.343470672984	2	436.6792297363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_GHC(Carbamidomethyl (C))C(Carbamidomethyl (C))KPGG_	ENSG00000168887|ENST00000306336|C2orf68;nc|nan|Q2NKX9-3|C2orf68	14.664097394203935	0.7913966407026132	4				NaN	NaN	0	NaN	13194	5645	18840
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18849	50.152	NaN	2280.2	30	0	1643.1	0.214			+	-1	CLVTCGFG	8	35	428.6887717895587	855.3629906459174	2	428.6907043457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_CLVTC(Carbamidomethyl (C))GFG_	REV__ENST00000536656.5_1_1:9788771-9788861:+|nuORF	19.359975847455235	0.7988239741663654	4				NaN	NaN	0	NaN	13196	5651	18848
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18850	50.155	NaN	1090	30	0	47.367	0.106	+			28634	NLASKNKLAS	10	62	523.3034246291919	1044.5922963251837	2	523.3038330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NLASKNKLAS_	nc|ENSG00000120802|P42166|TMPO	30.317721548370564	0.6322445173429027	4				NaN	NaN	0	NaN	13197	5651	18848
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18851	50.157	NaN	892.18	30	0	111.68	0.033	+			36765	SHSAGDCSQ	9	38	446.1657120309741	NaN	0	446.1659240722656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SHSAGDCSQ_	ENST00000374897.2_1_6:32796530-32796803:-|nuORF	15.641811463095205	0.38404136392510424	4				NaN	NaN	0	NaN	13198	5651	18848
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18855	50.173	NaN	2440.8	30	0	356.79	0.146	+			42535	TARGGRRSSAV	11	44	373.20977575146395	NaN	0	373.2097473144531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TARGGRRSSAV_	ENST00000497173.5_3_3:134515011-134670235:+|nuORF	30.568863376406313	0.42918353898720446	4				NaN	NaN	0	NaN	13199	5654	18854
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18862	50.207	NaN	875.81	30	0	174.97	0.143			+	51279	YRTTLLIQ	8	49	504.29769047703394	NaN	0	504.29779052734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YRTTLLIQ_	REV__APAF1|p.D266Y|1|0.26|ENSG00000120868|chr12:98662541-98662541|G/T|missense_variant	44.116797842482775	1.7418937515398478	4				NaN	NaN	0	NaN	13200	5660	18861
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18900	50.403	NaN	1982.9	30	0	256.8	0.143	+			35423	SARLVYSVL	9	33	336.5343614996312	NaN	0	336.5344543457031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SARLVYSVL_	CDH22|p.I579Sfs*4|1|0.33|ENSG00000149654|chr20:46178126-46178126|T/-|frameshift_variant;ENSG00000149654|ENST00000537909|CDH22	17.364965105453717	0.37820932774828947	4				NaN	NaN	0	NaN	13202	5696	18899
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18916	50.484	NaN	1098.6	30	0	128.37	0.143	+			25788	LSARFLIVT	9	38	510.3163146972656	NaN	0	510.3163146972656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSARFLIVT_	ENST00000415440.3_1_19:19790009-19790072:+|nuORF	27.882242232435846	0.3367954786602879	4				NaN	NaN	0	NaN	13203	5711	18915
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18920	50.501	NaN	2234.5	30	0	118.31	0.143	+			9646	ELSALKTQR	9	67	523.3034246291919	1044.5922963251837	2	523.3048706054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ELSALKTQR_	MTMR14|p.F405L|1|0.11|ENSG00000163719|chr3:9687871-9687871|C/A|missense_variant	25.57405402267927	0.5642445186134241	4				NaN	NaN	0	NaN	13204	5714	18919
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18924	50.518	NaN	2907	30	0	631.74	0.145			+	48205	VTALPSGT	8	48	373.20982679717235	NaN	0	373.210205078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTALPSGT_	REV__ENST00000369393.7_1_6:90383888-90383960:-|nuORF	40.5726180659479	1.7418937515398478	4				NaN	NaN	0	NaN	13205	5717	18923
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18941	50.599	NaN	2426.3	30	0	446.25	0.214	+			2788	ARREIQTLM	9	50	373.20982679717235	NaN	0	373.2099914550781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ARREIQTLM_	ENSG00000165868|ENST00000369209|HSPA12A;HSPA12A|p.D650Tfs*11|1|0.25|ENSG00000165868|chr10:116674861-116674861|C/-|frameshift_variant	31.529811441608018	0.3183796599642538	4				NaN	NaN	0	NaN	13207	5732	18940
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18942	50.603	NaN	878.98	30	0	207.68	0.035	+			31078	QFFVLIIQ	8	46	504.29821740076704	NaN	0	504.2986755371094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QFFVLIIQ_	ENST00000443361.1_1_9:108285096-108287232:+|nuORF	40.77816245573522	1.7418937515398478	4				NaN	NaN	0	NaN	13208	5732	18940
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18972	50.745	NaN	1988.8	30	0	380.41	0.143			+	22607	KTTKQAAFL	9	29	336.5338028928674	1006.5795792788023	3	336.5342102050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTTKQAAFL_	REV__tr|U7SWV5|U7SWV5_FUSNUBD-FAE-likedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01186PE=4SV=1	24.20275056022122	0.577060078256802	4				NaN	NaN	0	NaN	13211	5759	18971
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18995	50.856	NaN	1504.4	30	0	66.999	0.143	+			9581	ELKARISASA	10	57	523.3034246291919	1044.5922963251837	2	523.3045043945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ELKARISASA_	ENSG00000110244|ENST00000357780|APOA4	23.52269567125451	0.6877354443478558	4				NaN	NaN	0	NaN	13213	5780	18994
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19012	50.938	NaN	2297.9	30	0	641.65	0.146	+			37161	SIVPSVSG	8	42	373.2100597390513	NaN	0	373.21044921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIVPSVSG_	ENSG00000136381|ENST00000258886|IREB2;IREB2|p.F724Lfs*48|1|0.13|ENSG00000136381|chr15:78490512-78490512|T/-|frameshift_variant	28.2542754592877	1.7418937515398478	4				NaN	NaN	0	NaN	13215	5795	19011
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19016	50.955	NaN	1536.1	30	0	177.8	0.143	+			51017	YKDPVCLAK	9	49	518.7777499945031	NaN	0	518.7783203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YKDPVCLAK_	CON__ENSEMBL:ENSBTAP00000031900	45.97224482568171	0.23445038899310136	4				NaN	NaN	0	NaN	13216	5798	19015
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19020	50.972	NaN	1184.9	30	0	99.612	0.145	+			33859	RRKLREEF	8	59	567.3300015493132	1132.6454501654264	2	567.3316040039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RRKLREEF_	ENSG00000065883|ENST00000181839|CDK13;nc|ENSG00000065883|Q14004-2|CDK13	19.359975847455235	0.7988239741663654	4				NaN	NaN	0	NaN	13217	5801	19019
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19047	51.099	NaN	1544.3	30	0	110.64	0.144	+			7873	DRITLVGSTK	10	61	545.3169104008842	1088.6192678685684	2	545.3184204101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DRITLVGSTK_	ENSG00000177098|ENST00000324727|SCN4B	29.170058357718403	0.6416167986984785	4				NaN	NaN	0	NaN	13220	5825	19046
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19054	51.132	NaN	2090.4	30	0	418.27	0.143	+			35269	SALPNPPALK	10	31	336.53439047859547	NaN	0	336.5345153808594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SALPNPPALK_	CUX1|p.E933Sfs*59|1|0.14|ENSG00000257923|chr7:102202089-102202089|C/-|frameshift_variant;CUX1|p.I1081Sfs*39|2|0.46|ENSG00000257923|chr7:102227471-102227471|C/-|frameshift_variant;ENSG00000257923|ENST00000292535|CUX1;nc|ENSG00000257923|P39880-2|CUX1;nc|ENSG00000257923|P39880-3|CUX1;nc|ENSG00000257923|P39880-4|CUX1;nc|ENSG00000257923|P39880-5|CUX1;nc|ENSG00000257923|P39880-6|CUX1	29.14955571784316	0.4044631218331212	4				NaN	NaN	0	NaN	13221	5831	19053
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19070	51.213	NaN	989.14	30	0	111.83	0.145			+	9627	ELQFTTMSRS	10	55	600.2911229201969	NaN	0	600.2916870117188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ELQFTTMSRS_	REV__ENST00000428471.1_1_2:240323503-240323937:+|nuORF	29.170058357718403	0.40439580130713204	4				NaN	NaN	0	NaN	13222	5846	19069
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19115	51.436	NaN	2114.4	30	0	120.58	0.144	+			9352	EIRKIQTTT	9	68	545.3169104008842	1088.6192678685684	2	545.3170776367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EIRKIQTTT_	ENSG00000172915|ENST00000379939|NBEA;NBEA|p.V2250Lfs*10|1|0.36|ENSG00000172915|chr13:35550967-35550967|A/-|frameshift_variant;nc|ENSG00000172915|Q8NFP9|NBEA	37.15910966729921	0.4535818937225704	4				NaN	NaN	0	NaN	13225	5888	19114
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19134	51.533	NaN	915.32	30	0	100.19	0.144	+			5879	AVIVWSFMK	9	51	540.8001098632812	NaN	0	540.8001098632812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVIVWSFMK_	ENST00000514133.1_1_4:52895917-52895998:-|nuORF	49.44154591367651	0.21054156626303966	4				NaN	NaN	0	NaN	13226	5906	19133
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19141	51.565	NaN	2624.2	30	0	469.67	0.144	+			6702	AYVLNIVRF	9	55	547.8216976021051	1093.6288422710102	2	547.8216552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AYVLNIVRF_	ATP1B1|p.L184Hfs*6|1|0.09|ENSG00000143153|chr1:169127391-169127392|-/A|frameshift_variant;ENSG00000143153|ENST00000367815|ATP1B1;nc|ENSG00000143153|P05026-2|ATP1B1	139.97047562133406	0.010493916756945389	4				NaN	NaN	0	NaN	13227	5912	19140
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19145	51.582	NaN	1632.5	30	0	508.27	0.142	+			9023	EGDGEEGLQ	9	48	467.1930901128733	932.3716272925466	2	467.1929931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EGDGEEGLQ_	AHNAK2|p.D1643Tfs*9|1|0.12|ENSG00000185567|chr14:104950524-104950524|C/-|frameshift_variant;AHNAK2|p.D4448Gfs*6|1|0.2|ENSG00000185567|chr14:104942108-104942109|-/C|frameshift_variant;AHNAK2|p.D983Tfs*9|1|0.16|ENSG00000185567|chr14:104952504-104952504|C/-|frameshift_variant;AHNAK2|p.E5149Gfs*8|1|0.32|ENSG00000185567|chr14:104940005-104940006|-/C|frameshift_variant;AHNAK2|p.E5446Gfs*7|1|0.32|ENSG00000185567|chr14:104939114-104939115|-/C|frameshift_variant;AHNAK2|p.L4206Cfs*19|1|0.12|ENSG00000185567|chr14:104942835-104942835|G/-|frameshift_variant;AHNAK2|p.P2536Lfs*14|1|0.11|ENSG00000185567|chr14:104947844-104947844|G/-|frameshift_variant;ENSG00000185567|ENST00000333244|AHNAK2;nc|ENSG00000185567|Q8IVF2-3|AHNAK2	27.882242232435846	0.5426732730940306	4				NaN	NaN	0	NaN	13228	5915	19144
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19164	51.679	NaN	1201.3	30	0	277.5	0.214			+	14413	GTAPLVILSH	10	25	336.5344209330468	NaN	0	336.5340881347656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTAPLVILSH_	REV__ENST00000444374.1_1_9:92316696-92316852:+|nuORF	21.9598887501803	0.4201028297492154	4				NaN	NaN	0	NaN	13229	5933	19163
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19165	51.683	NaN	623.35	30	0	38.036	0.036				-1	VHPDEGQTH	9	48	531.2354125976562	NaN	0	531.2354125976562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))VHPDEGQTH_	ENST00000366955.7_1_1:214803920-214803995:+|nuORF	24.20275056022122	0.35506675290109213	4				NaN	NaN	0	NaN	13230	5933	19163
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19173	51.714	NaN	813.75	30	0	71.279	0.145	+			47565	VRFTVCLLIN	10	58	589.3436794739706	NaN	0	589.3436279296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VRFTVCLLIN_	NCAPG|p.R117T|1|0.37|ENSG00000109805|chr4:17812951-17812951|G/C|missense_variant	27.882242232435846	0.4086243523356342	4				NaN	NaN	0	NaN	13232	5939	19172
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19187	51.779	NaN	1362.5	30	0	76.868	0.214	+			21911	KRSSTLSTPL	10	66	545.3169104008842	1088.6192678685684	2	545.3180541992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KRSSTLSTPL_	GFI1|p.H330P|1|0.13|ENSG00000162676|chr1:92478689-92478689|T/G|missense_variant	17.468008924990375	0.7276870902328821	4				NaN	NaN	0	NaN	13234	5951	19186
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19188	51.782	NaN	1245.9	30	0	54.679	0.038			+	-1	LDLHTEWLM	9	51	600.2912882376979	NaN	0	600.2915649414062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LDLHTEWLM_	REV__OXSM|p.F179Lfs*45|2|0.27|ENSG00000151093|chr3:25791552-25791552|T/-|frameshift_variant	40.5726180659479	0.27166212580479165	4				NaN	NaN	0	NaN	13235	5951	19186
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19195	51.813	NaN	3578.3	30	0	901.44	0.138				-1	 	0	49	334.1644288872174	666.3143048412348	2	334.16497802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13236	5957	19194
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19208	51.864	NaN	6410.8	30	0	5403.6	0.214			+	17285	IACAEAYLK	9	43	491.2565615724169	980.4985702116338	2	491.256591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IACAEAYLK_	REV__ENSG00000135476|ENST00000257934|ESPL1;REV__ESPL1|p.Q1311Rfs*21|1|0.46|ENSG00000135476|chr12:53286668-53286669|AG/-|frameshift_variant;REV__nc|ENSG00000135476|Q14674-2|ESPL1	20.94693142431847	0.6074874384046576	4				NaN	NaN	0	NaN	13240	5966	19207
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19209	51.867	NaN	1048.7	30	0	146.83	0.034				-1	NCMTTMIA	8	47	487.1934509277344	NaN	0	487.1934509277344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),2 Oxidation (M)	_NC(Carbamidomethyl (C))M(Oxidation (M))TTM(Oxidation (M))IA_	ENSG00000164627|ENST00000287152|KIF6;nc|ENSG00000164627|Q6ZMV9-3|KIF6	21.70233525837049	1.7418937515398478	4				NaN	NaN	0	NaN	13241	5966	19207
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19232	51.964	NaN	1425.1	30	0	88.716	0.145			+	39035	SSSLSIIRIGT	11	64	567.3294385757284	1132.6443242182568	2	567.330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSSLSIIRIGT_	REV__COBL|p.E953Rfs*112|1|0.24|ENSG00000106078|chr7:51028239-51028239|C/-|frameshift_variant;REV__COBL|p.K1094Nfs*20|1|0.24|ENSG00000106078|chr7:51027814-51027814|T/-|frameshift_variant;REV__COBL|p.Q983Rfs*82|1|0.44|ENSG00000106078|chr7:51028148-51028148|T/-|frameshift_variant;REV__COBL|p.R1238Gfs*4|1|0.12|ENSG00000106078|chr7:51025165-51025165|T/-|frameshift_variant;REV__ENSG00000106078|ENST00000265136|COBL;REV__ENST00000462395.1_1_7:51085250-51098638:-|nuORF;REV__nc|ENSG00000106078|O75128-2|COBL;REV__nc|ENSG00000106078|O75128-3|COBL;REV__nc|ENSG00000106078|O75128-6|COBL;REV__nc|ENSG00000106078|O75128-7|COBL	19.262678746197807	0.7802940895261122	4				NaN	NaN	0	NaN	13246	5984	19231
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19272	52.16	NaN	1264.5	30	0	237.99	0.138				-1	 	0	38	334.1644288872174	666.3143048412348	2	334.1649169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13250	6020	19271
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19292	52.257	NaN	954.33	30	0	99.543	0.144			+	-1	GMHKQLILF	9	52	551.8099975585938	NaN	0	551.8099975585938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_GM(Oxidation (M))HKQLILF_	REV__ENST00000261187.8_1_12:60179162-60179252:+|nuORF	55.50420428727701	0.16876052142120426	4				NaN	NaN	0	NaN	13252	6038	19291
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19302	52.306	NaN	2282.1	30	0	124.04	0.214				-1	 	0	67	567.3294385757284	1132.6443242182568	2	567.3303833007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13253	6047	19301
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19303	52.31	NaN	809.33	30	0	76.148	0.035			+	21920	KRTTKSTVS	9	43	504.2979736328125	NaN	0	504.2979736328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KRTTKSTVS_	REV__ADGB|p.K1379Rfs*12|1|0.29|ENSG00000118492|chr6:146784714-146784714|A/-|frameshift_variant;REV__ADGB|p.S1313Y|1|0.15|ENSG00000118492|chr6:146782095-146782095|C/A|missense_variant;REV__ENSG00000118492|ENST00000397944|ADGB;REV__nc|ENSG00000118492|Q8N7X0-2|ADGB	44.116797842482775	0.2472372736944149	4				NaN	NaN	0	NaN	13254	6047	19301
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19307	52.325	NaN	830.26	30	0	59.407	0.145			+	49983	WAKLEQDFY	9	49	600.2903442382812	NaN	0	600.2903442382812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WAKLEQDFY_	REV__ENSG00000149792|ENST00000279242|MRPL49;REV__ENST00000528529.1_1_11:64889784-64893341:+|nuORF;REV__ENST00000532671.1_1_11:64892850-64893341:+|nuORF;REV__ENST00000534078.1_1_11:64889784-64893341:+|nuORF	24.519189625965996	0.35377483217337163	4				NaN	NaN	0	NaN	13255	6050	19306
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19314	52.356	NaN	2193.7	30	0	994.28	0.14				-1	 	0	41	396.80131157703505	791.5880702208701	2	396.80120849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13256	6056	19313
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19348	52.532	NaN	1523.8	30	0	456.84	0.214			+	46656	VGDTGVVV	8	42	373.20969995707424	NaN	0	373.21002197265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VGDTGVVV_	REV__ENST00000360121.4_1_16:29677113-29677461:+|nuORF	20.481830146152948	1.741893751539848	4				NaN	NaN	0	NaN	13257	6089	19347
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19349	52.535	NaN	1045.6	30	0	230.34	0.035			+	11815	FSTQKVKGI	9	21	336.53435100912014	NaN	0	336.5346374511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FSTQKVKGI_	REV__ENST00000508179.1_1_5:9549691-9549847:+|nuORF	12.206847966760668	0.39566704307768535	4				NaN	NaN	0	NaN	13258	6089	19347
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19375	52.649	NaN	1081.5	30	0	43.829	0.214	+			18175	ILTSVSSLRGT	11	60	567.3294385757284	1132.6443242182568	2	567.3310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ILTSVSSLRGT_	ENSG00000106462|ENST00000320356|EZH2;ENST00000498186.5_1_7:148514900-148581332:-|nuORF;nc|ENSG00000106462|Q15910-3|EZH2;nc|ENSG00000106462|Q15910|EZH2	22.579656572578934	0.7529490144093228	4				NaN	NaN	0	NaN	13263	6110	19374
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19376	52.653	NaN	958.14	30	0	48.723	0.038			+	-1	GHVCPVLILIT	11	59	611.356042994171	NaN	0	611.3570556640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GHVC(Carbamidomethyl (C))PVLILIT_	REV__ENST00000504398.1_1_5:28809070-28809244:-|nuORF	20.94693142431847	0.456735970842152	4				NaN	NaN	0	NaN	13264	6110	19374
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19389	52.714	NaN	943.17	30	0	215.96	0.143			+	26964	LYKEKQAK	8	50	504.2977823477073	NaN	0	504.2978515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LYKEKQAK_	REV__ACADVL|p.F461*|1|0.27|ENSG00000072778|chr17:7224016-7224017|TT/-|frameshift_variant;REV__ACADVL|p.G439Vfs*5|2|0.36|ENSG00000072778|chr17:7223854-7223854|G/-|frameshift_variant;REV__ENSG00000072778|ENST00000356839|ACADVL;REV__ENST00000577191.5_1_17:7123303-7125473:+|nuORF;REV__nc|ENSG00000072778|P49748-2|ACADVL;REV__nc|ENSG00000072778|P49748-3|ACADVL	25.450171626174864	1.7418937515398478	4				NaN	NaN	0	NaN	13265	6122	19388
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19403	52.779	NaN	1525.6	30	0	77.607	0.145				-1	 	0	72	589.3426529644605	1176.670752995721	2	589.845458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13267	6134	19402
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19471	53.117	NaN	1459.2	30	0	45.808	0.145				-1	 	0	69	589.3426529644605	1176.670752995721	2	589.3431396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13272	6197	19470
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19475	53.133	NaN	1415.4	30	0	259.32	0.214	+			43482	TGPAPPRRR	9	27	336.5341349139554	NaN	0	336.5342712402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TGPAPPRRR_	ENST00000465952.5_1_13:31191850-31192063:+|nuORF	24.20275056022122	0.35506675290109213	4				NaN	NaN	0	NaN	13273	6200	19474
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19476	53.137	NaN	1345.4	30	0	94.27	0.035			+	31494	QLEDLPIGF	9	55	516.2742628441658	NaN	0	516.2741088867188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QLEDLPIGF_	REV__ENSG00000031003|ENST00000689681|FAM13B;REV__FAM13B|p.F782Lfs*18|2|0.29|ENSG00000031003|chr5:137943145-137943145|A/-|frameshift_variant;REV__nc|ENSG00000031003|Q9NYF5-2|FAM13B;REV__nc|ENSG00000031003|Q9NYF5|FAM13B	38.80614096846853	0.28164298475537564	4				NaN	NaN	0	NaN	13274	6200	19474
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19534	53.421	NaN	1521.4	30	0	281.36	0.144	+			42124	SYLPLAHMF	9	52	539.7736206054688	NaN	0	539.7736206054688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SYLPLAHMF_	ENSG00000197142|ENST00000354655|ACSL5;nc|ENSG00000164398|Q9UKU0-2|ACSL6;nc|ENSG00000164398|Q9UKU0-3|ACSL6;nc|ENSG00000164398|Q9UKU0-8|ACSL6;nc|ENSG00000197142|Q9ULC5-3|ACSL5;nc|ENSG00000197142|Q9ULC5-4|ACSL5	79.9392285194092	0.07159198198769286	4				NaN	NaN	0	NaN	13278	6254	19533
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19551	53.501	NaN	888.95	30	0	46.581	0.145			+	49936	VYVPFQRRI	9	57	589.3435525051455	NaN	0	589.3433227539062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYVPFQRRI_	REV__ENSG00000128915|ENST00000261520|ICE2	19.359975847455235	0.3714571876404798	4				NaN	NaN	0	NaN	13280	6269	19550
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19561	53.549	NaN	1509	30	0	74.044	0.145	+			32808	RAVASINQHLL	11	59	611.3568929335986	1220.699232933997	2	611.3567504882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RAVASINQHLL_	ENSG00000198838|ENST00000634891|RYR3;nc|ENSG00000198838|Q15413-2|RYR3;nc|ENSG00000198838|Q15413-3|RYR3;RYR3|p.E2211Qfs*84|1|0.14|ENSG00000198838|chr15:33722725-33722726|-/CA|frameshift_variant;RYR3|p.E3943Rfs*18|1|0.12|ENSG00000198838|chr15:33837800-33837801|-/A|frameshift_variant;RYR3|p.F766Lfs*13|1|0.12|ENSG00000198838|chr15:33613314-33613314|T/-|frameshift_variant;RYR3|p.G2237Efs*57|1|0.42|ENSG00000198838|chr15:33722800-33722800|G/-|frameshift_variant;RYR3|p.N4580Mfs*8|1|0.37|ENSG00000198838|chr15:33853618-33853618|A/-|frameshift_variant	19.1035232394073	0.7810393085260824	4				NaN	NaN	0	NaN	13281	6278	19560
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19588	53.678	NaN	569.62	30	0	60.797	0.143	+			6586	AYLKAIVLF	9	35	519.3236482394966	1036.6327435457931	2	519.324462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AYLKAIVLF_	ENSG00000120798|ENST00000333003|NR2C1;ENSG00000177463|ENST00000425241|NR2C2;ENST00000475707.5_1_3:15045421-15079667:+|nuORF;ENST00000547594.5_1_12:95420624-95451409:-|nuORF;ENST00000552484.1_1_12:95422157-95422295:-|nuORF;nc|ENSG00000177463|P49116-2|NR2C2;NR2C2|p.F563Lfs*10|1|0.4|ENSG00000177463|chr3:15042899-15042899|T/-|frameshift_variant	25.57405402267927	0.5642445186134241	4				NaN	NaN	0	NaN	13284	6302	19587
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19627	53.87	NaN	1581.9	30	0	438.07	0.214				-1	MECCCCCC	8	38	356.74648724107067	NaN	0	356.7464904785156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	3 Carbamidomethyl (C)	_MEC(Carbamidomethyl (C))C(Carbamidomethyl (C))CCC(Carbamidomethyl (C))C_	ENSG00000170775|ENST00000303921|GPR37	7.193352174278301	1.7418937515398478	4				NaN	NaN	0	NaN	13287	6338	19626
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19628	53.874	NaN	932.11	30	0	91.958	0.038	+			49826	VYSRYFTTY	9	47	600.2927856445312	NaN	0	600.2927856445312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	23.52269567125451	0.3573684076213556	4				NaN	NaN	0	NaN	13288	6338	19626
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19632	53.888	NaN	1449.5	30	0	93.946	0.145			+	-1	KLSLMRMLTL	10	64	611.3568929335986	1220.699232933997	2	611.3579711914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_KLSLM(Oxidation (M))RMLTL_	REV__ENSG00000198626|ENST00000366574|RYR2;REV__nc|ENSG00000198626|Q92736-2|RYR2;REV__RYR2|p.S4583Lfs*11|1|0.45|ENSG00000198626|chr1:237792286-237792286|T/-|frameshift_variant	20.030474535948922	0.7146664069068879	4				NaN	NaN	0	NaN	13289	6341	19631
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19664	54.047	NaN	697.63	30	0	94.98	0.142				-1	VAMACAIPP	9	42	465.2330104427805	NaN	0	465.23321533203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_VAMAC(Carbamidomethyl (C))AIPP_	ENST00000303391.10_2_X:153295129-153295291:-|nuORF	21.70233525837049	0.3635294413921169	4				NaN	NaN	0	NaN	13291	6371	19663
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19725	54.347	NaN	678.44	30	0	54.422	0.145	+			46965	VKIHITGLRND	11	51	633.3697509144686	1264.724948895737	2	633.3704833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VKIHITGLRND_	ENSG00000164287|ENST00000381375|CDC20B;nc|ENSG00000164287|Q86Y33-2|CDC20B;nc|ENSG00000164287|Q86Y33-3|CDC20B;nc|ENSG00000164287|Q86Y33-4|CDC20B	12.206681093483082	0.8133326165653908	4				NaN	NaN	0	NaN	13295	6428	19724
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19829	54.857	NaN	1282.2	30	0	163.29	0.145				-1	LLRAACFKGP	10	37	373.209716796875	NaN	0	373.209716796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LLRAACFKGP_	ENST00000370939.7_1_6:52929942-52930005:+|nuORF	16.71738777980365	0.4201028297492154	4				NaN	NaN	0	NaN	13303	6524	19828
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19836	54.888	NaN	598.1	30	0	40.242	0.145			+	11956	FVKQLAIVNPH	11	48	633.3699951171875	NaN	0	633.3699951171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FVKQLAIVNPH_	REV__ENSG00000155111|ENST00000368911|CDK19;REV__nc|ENSG00000155111|Q9BWU1-2|CDK19	13.45404412870281	0.456735970842152	4				NaN	NaN	0	NaN	13304	6530	19835
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19880	55.095	NaN	1247.6	30	0	262.05	0.143	+			41925	SVVLALRSY	9	37	336.53441716212404	NaN	0	336.53448486328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVVLALRSY_	nc|ENSG00000140832|Q96A59-2|MARVELD3	23.04248740728303	0.3589936788096251	4				NaN	NaN	0	NaN	13309	6569	19879
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19896	55.173	NaN	1100.1	30	0	132.83	0.145			+	-1	APNVISLDNCP	11	53	600.290771484375	NaN	0	600.290771484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_APNVISLDNC(Carbamidomethyl (C))P_	REV__ENSG00000119772|ENST00000321117|DNMT3A;REV__ENST00000474887.5_1_2:25458684-25467188:-|nuORF;REV__ENST00000491288.5_1_2:25462067-25466797:-|nuORF;REV__nc|ENSG00000119772|Q9Y6K1-2|DNMT3A	27.047317107675042	0.44487757903053116	4				NaN	NaN	0	NaN	13310	6584	19895
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19933	55.361	NaN	1918.9	30	0	311.38	0.214	+			25724	LRRCSTLATP	10	38	373.21044921875	NaN	0	373.21044921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LRRCSTLATP_	ENST00000300434.3_1_9:130707799-130712818:-|nuORF	21.68575002086885	0.4201028297492154	4				NaN	NaN	0	NaN	13311	6620	19932
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19934	55.365	NaN	760.28	30	0	57.629	0.032			+	-1	DWCSMEFVL	9	33	396.1697998046875	NaN	0	396.1697998046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_DWC(Carbamidomethyl (C))SMEFVL_	REV__ENST00000265896.9_1_8:126034442-126034517:+|nuORF	19.1035232394073	0.3723251548669699	4				NaN	NaN	0	NaN	13312	6620	19932
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19967	55.521	NaN	268.92	30	0	45.283	0.143			+	24820	LIRYISSK	8	21	327.2014217346912	NaN	0	327.201171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LIRYISSK_	REV__ENSG00000105671|ENST00000247003|DDX49;REV__ENST00000595858.5_1_19:19032475-19037138:+|nuORF;REV__ENST00000601772.1_1_19:19035054-19035967:+|nuORF;REV__ENST00000601803.5_1_19:19032987-19035509:+|nuORF;REV__nc|ENSG00000105671|Q9Y6V7-2|DDX49	11.511019455917149	1.7418937515398478	4				NaN	NaN	0	NaN	13315	6650	19966
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	20121	56.387	NaN	1420.2	30	0	419.3	0.142	+			29271	NYGKKSKL	8	42	469.27667930784105	NaN	0	469.2774353027344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NYGKKSKL_	ENSG00000243910|ENST00000490341|TUBA4B	27.882242232435846	1.7418937515398478	4				NaN	NaN	0	NaN	13322	6797	20120
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	657	3.4928	NaN	566.48	30	0	215.39	0.143				-1	 	0	22	331.0021667480469	NaN	0	331.0021667480469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	0	655	656
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	754	3.9947	NaN	167240	30	0	70885	0.141				-1	 	0	53	281.0517686277259	NaN	0	281.0516357421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1	751	753
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	1274	6.7138	NaN	375.74	30	0	331.16	0.141	+			18127	ILGGPFHV	8	5	420.24142416865493	NaN	0	420.2410888671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ILGGPFHV_	ENSG00000127412|ENST00000265310|TRPV5;ENSG00000165125|ENST00000359396|TRPV6;nc|ENSG00000165125|Q9H1D0-2|TRPV6	5.08689130490037	1.7418937515398478	4				NaN	NaN	0	NaN	2	1270	1273
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	1491	7.8432	NaN	149950	30	0	64263	0.141				-1	 	0	53	281.05177991921005	NaN	0	281.0517883300781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3	1486	1490
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	1992	10.445	NaN	1649.4	30	0	273.98	0.214				-1	EMCINCGKC	9	24	565.7085646526789	1129.4025763721577	2	565.70849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C),Oxidation (M)	_EM(Oxidation (M))CINC(Carbamidomethyl (C))GKC(Carbamidomethyl (C))_	ENSG00000188641|ENST00000370192|DPYD	12.206847966760668	0.6112419832031292	4				NaN	NaN	0	NaN	6	1984	1991
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	1993	10.449	NaN	2318.1	30	0	1112.8	0.036			+	-1	SEKCLPCY	8	24	528.7273645096104	1055.4401760860208	2	528.7276611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_SEKC(Carbamidomethyl (C))LPC(Carbamidomethyl (C))Y_	REV__ENSG00000154359|ENST00000398246|LONRF1;REV__LONRF1|p.I553Nfs*3|2|0.18|ENSG00000154359|chr8:12731766-12731767|-/T|frameshift_variant;REV__nc|ENSG00000154359|Q17RB8-2|LONRF1	19.359975847455235	0.7988239741663654	4				NaN	NaN	0	NaN	7	1984	1991
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	1998	10.463	NaN	1346.2	30	0	385.01	0.214				-1	KCWDNRRE	8	21	582.2719116210938	NaN	0	582.2719116210938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_KC(Carbamidomethyl (C))WDNRRE_	nc|ENSG00000152683|Q6NXT4-2|SLC30A6	12.206847966760668	1.7418937515398478	4				NaN	NaN	0	NaN	9	1987	1997
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	1999	10.467	NaN	677.86	30	0	156.2	0.036				-1	EPCEGMDRS	9	12	548.7069091796875	NaN	0	548.7069091796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_EPC(Carbamidomethyl (C))EGM(Oxidation (M))DRS_	ENST00000401050.7_1_1:53133125-53134458:+|nuORF	11.511019455917149	0.3980220838287494	4				NaN	NaN	0	NaN	10	1987	1997
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2015	10.511	NaN	530.19	30	0	200	0.14			+	25018	LLGPTRNLRR	10	22	399.2503934012449	NaN	0	399.2503662109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LLGPTRNLRR_	REV__ENST00000479440.1_1_7:44613191-44613521:-|nuORF	7.804521658770766	0.4201028297492154	4				NaN	NaN	0	NaN	20	1993	2014
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2024	10.544	NaN	8496.7	30	0	1757.9	0.143			+	3212	ASKSRISIH	9	38	333.5291135158743	997.5655111478229	3	333.8634338378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASKSRISIH_	REV__ENSG00000083168|ENST00000265713|KAT6A	47.657333605630114	0.33044192980041115	4				NaN	NaN	0	NaN	23	1999	2023
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2032	10.566	NaN	1034.3	30	0	699.77	0.214			+	-1	EPVQCARH	8	23	498.7380921096593	995.4616312861186	2	498.7380065917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_EPVQC(Carbamidomethyl (C))ARH_	REV__ENSG00000183856|ENST00000361170|IQGAP3	19.359975847455235	0.7988239741663654	4				NaN	NaN	0	NaN	28	2002	2031
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2033	10.569	NaN	824	30	0	169.39	0.106			+	7867	DRGPTINHL	9	15	511.77060334748467	1021.5266537617694	2	511.7700500488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DRGPTINHL_	REV__ENSG00000148600|ENST00000623527|CDHR1;REV__ENST00000459673.1_1_10:85972822-85974374:+|nuORF;REV__nc|ENSG00000148600|Q96JP9-2|CDHR1	18.324413293986947	0.6112419832031293	4				NaN	NaN	0	NaN	29	2002	2031
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2034	10.571	NaN	719.25	30	0	173.91	0.037			+	-1	CYEEVRQF	8	12	565.7525634765625	NaN	0	565.7525634765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_C(Carbamidomethyl (C))YEEVRQF_	REV__ENSG00000170381|ENST00000643230|SEMA3E;REV__nc|ENSG00000170381|O15041-2|SEMA3E	9.47055586587303	1.741893751539848	4				NaN	NaN	0	NaN	30	2002	2031
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2041	10.588	NaN	2031	30	0	661.88	0.215			+	31874	QPWPQGSALI	10	47	548.7916653365965	1095.5687777399928	2	548.79248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QPWPQGSALI_	REV__ENST00000526769.3_1_11:6743038-6767630:-|nuORF	36.446750945000026	0.5818864909973037	4				NaN	NaN	0	NaN	34	2005	2040
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2042	10.591	NaN	958.59	30	0	274.67	0.106	+			30992	QERRAVHRA	9	22	561.8150024414062	NaN	0	561.8150024414062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QERRAVHRA_	ENST00000342584.3_1_5:471473-471785:-|nuORF	21.9598887501803	0.3626577482100488	4				NaN	NaN	0	NaN	35	2005	2040
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2043	10.593	NaN	991.7	30	0	205.06	0.037			+	10448	EVLSSPVLCCL	11	18	581.7933959960938	NaN	0	581.7933959960938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EVLSSPVLCCL_	REV__nc|ENSG00000258597|P20848|SERPINA2	10.265252068803164	0.456735970842152	4				NaN	NaN	0	NaN	36	2005	2040
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2048	10.608	NaN	977.97	30	0	533.23	0.144			+	9697	EMEFFFFN	8	12	555.7332763671875	NaN	0	555.7332763671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EMEFFFFN_	REV__nc|ENSG00000114316|Q13107-3|USP4	8.822329726475273	1.7418937515398478	4				NaN	NaN	0	NaN	38	2008	2047
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2057	10.641	NaN	2532.3	30	0	724.56	0.214	+			18136	ILIKVAWKK	9	38	549.87199743019	NaN	0	549.8716430664062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ILIKVAWKK_	ENSG00000155850|ENST00000286298|SLC26A2	30.503639358989545	0.3235605894931338	4				NaN	NaN	0	NaN	41	2014	2056
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2058	10.644	NaN	884.1	30	0	193.5	0.106	+			16843	HPEGMEGATR	10	18	542.74609375	NaN	0	542.74609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HPEGMEGATR_	ENSG00000182162|ENST00000381297|P2RY8	10.865556482863946	0.4201028297492154	4				NaN	NaN	0	NaN	42	2014	2056
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2059	10.646	NaN	1103.3	30	0	256.24	0.034			+	42265	TAATWGMVP	9	38	467.2261793821203	NaN	0	467.2264709472656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TAATWGMVP_	REV__ENSG00000006695|ENST00000261643|COX10;REV__nc|ENSG00000006695|Q12887-2|COX10	31.954861631926434	0.3162336699109506	4				NaN	NaN	0	NaN	43	2014	2056
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2069	10.668	NaN	14930	30	0	9737.5	0.214	+			4839	ATPKKASKPK	10	55	528.3324804939758	1054.6504080547516	2	528.3328247070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATPKKASKPK_	ENSG00000189060|ENST00000340857|H1-0;nc|ENSG00000189060|P07305-2|H1-0	97.59673978297657	0.0875810153152853	4				NaN	NaN	0	NaN	50	2017	2068
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2070	10.671	NaN	678.11	30	0	65.392	0.035				-1	EQSSTMLGK	9	29	332.8278503417969	NaN	0	332.8278503417969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_EQSSTM(Oxidation (M))LGK_	ENSG00000121350|ENST00000240651|PYROXD1;PYROXD1|p.K278Efs*2|1|0.05|ENSG00000121350|chr12:21461105-21461106|-/GAAT|frameshift_variant;PYROXD1|p.P283Qfs*20|1|0.11|ENSG00000121350|chr12:21461117-21461117|T/-|frameshift_variant	19.1035232394073	0.3723251548669699	4				NaN	NaN	0	NaN	51	2017	2068
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2076	10.686	NaN	63438	30	0	41429	0.214	+			13462	GLKLRLLKN	9	63	352.24091758033217	NaN	0	352.55718994140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GLKLRLLKN_	ENST00000393667.7_1_3:121416548-121416584:-|nuORF	14.864876125193954	0.3866709117995958	4				NaN	NaN	0	NaN	54	2020	2075
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2077	10.69	NaN	24855	30	0	13563	0.106	+			32007	QRLATLYKS	9	34	540.3118286132812	NaN	0	540.3118286132812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QRLATLYKS_	ENSG00000108384|ENST00000337432|RAD51C	34.172542307311794	0.30503706118289736	4				NaN	NaN	0	NaN	55	2020	2075
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2078	10.692	NaN	19787	30	0	3213.7	0.106			+	31847	QPSYRPRSY	9	73	577.2931518554688	NaN	0	577.2931518554688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QPSYRPRSY_	REV__ENSG00000204410|ENST00000375750|MSH5;REV__MSH5|p.A688Tfs*25|1|0.07|ENSG00000204410|chr6:31761495-31761496|-/ACACA|frameshift_variant;REV__nc|ENSG00000204410|O43196-2|MSH5;REV__nc|ENSG00000204410|O43196-3|MSH5;REV__nc|ENSG00000204410|O43196-4|MSH5	51.52775601994872	0.19616436856719055	4				NaN	NaN	0	NaN	56	2020	2075
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2079	10.694	NaN	15445	30	0	11676	0.106				-1	WKGGRRSGMH	10	20	594.2958984375	NaN	0	594.2958984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_WKGGRRSGM(Oxidation (M))H_	ENST00000531237.1_1_11:8832388-8832571:-|nuORF	15.641811463095205	0.4201028297492154	4				NaN	NaN	0	NaN	57	2020	2075
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2080	10.696	NaN	12374	30	0	2673.8	0.106			+	-1	LLWLYSADP	9	22	560.2907104492188	NaN	0	560.2907104492188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LLWLYSADP_	REV__ENSG00000170848|ENST00000187910|PSG6;REV__ENST00000402456.4_1_19:43414555-43422019:-|nuORF;REV__nc|ENSG00000170848|Q00889|PSG6;REV__PSG6|p.E171D|1|0.4|ENSG00000170848|chr19:42910773-42910773|C/A|missense_variant	12.959181472943097	0.3931207604263714	4				NaN	NaN	0	NaN	58	2020	2075
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2081	10.697	NaN	4532.4	30	0	1554.6	0.106			+	21057	KKLAVHVDK	9	42	346.55377197265625	NaN	0	346.55377197265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KKLAVHVDK_	REV__ENSG00000255298|ENST00000641992|OR8G5;REV__nc|ENSG00000255298|Q8NG78|OR8G5	17.468008924990375	0.37786057458515737	4				NaN	NaN	0	NaN	59	2020	2075
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2082	10.699	NaN	6653.3	30	0	4508.3	0.036			+	-1	LSLPLGSVCY	10	21	554.789306640625	NaN	0	554.789306640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_LSLPLGSVC(Carbamidomethyl (C))Y_	REV__ADCY4|p.R528Gfs*3|1|0.38|ENSG00000129467|chr14:24326152-24326152|G/-|frameshift_variant;REV__ENSG00000129467|ENST00000418030|ADCY4	10.865556482863946	0.4201028297492154	4				NaN	NaN	0	NaN	60	2020	2075
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2091	10.81	NaN	2566.9	30	0	708.85	0.214	+			33989	RSGKDHAR	8	47	463.7489383700796	NaN	0	463.7491149902344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RSGKDHAR_	ENST00000502464.5_1_5:65018131-65058826:+|nuORF	38.80614096846853	1.7418937515398478	4				NaN	NaN	0	NaN	66	2023	2090
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2092	10.814	NaN	2011.7	30	0	285.45	0.106				-1	VVCKYFQRR	9	13	628.3391723632812	NaN	0	628.3391723632812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_VVC(Carbamidomethyl (C))KYFQRR_	MKRN1|p.G96R|1|0.29|ENSG00000133606|chr7:140471911-140471911|C/T|missense_variant	3.6843469609004	0.40727630907727536	4				NaN	NaN	0	NaN	67	2023	2090
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2093	10.816	NaN	1665.9	30	0	232.73	0.039			+	-1	GRWTRSCNRH	10	25	665.3197631835938	NaN	0	665.3197631835938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_GRWTRSC(Carbamidomethyl (C))NRH_	REV__ENST00000518267.5_1_5:171533890-171542129:-|nuORF;REV__ENST00000519441.5_1_5:171533890-171534875:-|nuORF;REV__ENST00000521322.1_1_5:171533890-171534875:-|nuORF	17.468008924990375	0.4201028297492154	4				NaN	NaN	0	NaN	68	2023	2090
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2102	10.836	NaN	1587.7	30	0	356.89	0.214			+	20667	KGLLQLEEF	9	43	538.802001953125	NaN	0	538.802001953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KGLLQLEEF_	REV__EIF2AK4|p.L856Wfs*7|1|0.47|ENSG00000128829|chr15:39990307-39990307|T/-|frameshift_variant;REV__EIF2AK4|p.P1003Hfs*17|1|0.32|ENSG00000128829|chr15:40001069-40001069|C/-|frameshift_variant;REV__ENSG00000128829|ENST00000263791|EIF2AK4;REV__nc|ENSG00000128829|Q9P2K8-2|EIF2AK4;REV__nc|ENSG00000128829|Q9P2K8-3|EIF2AK4	51.33545320467046	0.19748963086191895	4				NaN	NaN	0	NaN	74	2026	2101
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2103	10.839	NaN	1384.6	30	0	861.44	0.036	+			40336	STTCPAHSWP	10	19	543.7371121254032	NaN	0	543.7371215820312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STTCPAHSWP_	ENST00000578026.5_1_17:57335188-57344505:+|nuORF	16.473147378115264	0.4201028297492154	4				NaN	NaN	0	NaN	75	2026	2101
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2110	10.857	NaN	5032.9	30	0	1235.1	0.214			+	-1	LCLLMPWLH	9	57	591.8126831054688	NaN	0	591.8126831054688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_LC(Carbamidomethyl (C))LLMPWLH_	REV__ENST00000377893.2_1_1:6307779-6307875:-|nuORF	21.70233525837049	0.3635294413921169	4				NaN	NaN	0	NaN	79	2029	2109
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2111	10.861	NaN	4799.3	30	0	2508.6	0.106			+	-1	AKTSSQYQCMK	11	26	645.7965087890625	NaN	0	645.7965087890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_AKTSSQYQCM(Oxidation (M))K_	REV__ZNF335|p.R253Q|1|0.51|ENSG00000198026|chr20:45967790-45967790|C/T|missense_variant	17.468008924990375	0.456735970842152	4				NaN	NaN	0	NaN	80	2029	2109
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2112	10.863	NaN	1357.1	30	0	328.94	0.106	+			4155	ATETTTTRHK	10	36	573.2992553710938	NaN	0	573.2992553710938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATETTTTRHK_	ENSG00000113282|ENST00000411809|CLINT1;nc|ENSG00000113282|Q14677-2|CLINT1;nc|ENSG00000113282|Q14677-3|CLINT1	40.05817265558897	0.3684561582319974	4				NaN	NaN	0	NaN	81	2029	2109
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2113	10.865	NaN	1703.9	30	0	827.19	0.106	+			11205	FHSVLQMVLE	10	25	601.8160400390625	NaN	0	601.8160400390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FHSVLQMVLE_	DLEC1|p.N951Mfs*67|1|0.31|ENSG00000008226|chr3:38100410-38100410|A/-|frameshift_variant;DLEC1|p.Y1310Mfs*121|1|0.59|ENSG00000008226|chr3:38116521-38116521|T/-|frameshift_variant;ENSG00000008226|ENST00000308059|DLEC1;nc|ENSG00000008226|Q9Y238-2|DLEC1;nc|ENSG00000008226|Q9Y238-3|DLEC1	21.9598887501803	0.4201028297492154	4				NaN	NaN	0	NaN	82	2029	2109
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2114	10.867	NaN	1569.1	30	0	452.18	0.106				-1	MELPSGPGPER	11	33	606.2887573242188	NaN	0	606.2887573242188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))MELPSGPGPER_	ENSG00000115307|ENST00000377526|AUP1;ENST00000463900.5_1_2:74756150-74756756:-|nuORF;ENST00000472800.1_1_2:74756265-74756756:-|nuORF;nc|ENSG00000115307|Q9Y679-3|AUP1	18.262085536374414	0.456735970842152	4				NaN	NaN	0	NaN	83	2029	2109
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2115	10.868	NaN	1778.2	30	0	358.48	0.106			+	-1	MYVYKNDKF	9	22	612.2935180664062	NaN	0	612.2935180664062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_M(Oxidation (M))YVYKNDKF_	REV__ENSG00000138669|ENST00000264399|PRKG2;REV__nc|ENSG00000138669|Q13237-2|PRKG2;REV__PRKG2|p.K707Yfs*4|1|0.03|ENSG00000138669|chr4:81104377-81104378|-/TAGTAGATGTA|frameshift_variant	18.324413293986947	0.3749620627292244	4				NaN	NaN	0	NaN	84	2029	2109
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2116	10.87	NaN	958.17	30	0	176.74	0.039				-1	YCLDDFYRY	9	13	657.7755737304688	NaN	0	657.7755737304688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_YC(Carbamidomethyl (C))LDDFYRY_	nc|ENSG00000162458|Q8WUP2-2|FBLIM1	7.690282842768113	0.40727630907727536	4				NaN	NaN	0	NaN	85	2029	2109
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2126	10.904	NaN	1729.2	30	0	760.73	0.144			+	46850	VIFWLESY	8	27	528.7730478460212	NaN	0	528.7725830078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VIFWLESY_	REV__ENSG00000042781|ENST00000307340|USH2A;REV__nc|ENSG00000042781|O75445-3|USH2A;REV__USH2A|p.E5096Gfs*82|1|0.44|ENSG00000042781|chr1:215634469-215634470|-/C|frameshift_variant	12.959181472943097	1.7418937515398478	4				NaN	NaN	0	NaN	89	2035	2125
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2144	10.97	NaN	2001.6	30	0	380.28	0.145			+	31072	QFDHYLHCV	9	23	581.2591110206677	1160.5036691081352	2	581.2581176757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QFDHYLHCV_	REV__ENST00000599145.1_1_19:58927017-58927281:+|nuORF	17.364965105453717	0.6112419832031293	4				NaN	NaN	0	NaN	95	2047	2143
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2151	10.99	NaN	3453.1	30	0	983.2	0.213			+	31416	QKLLLEQHQS	10	36	612.339162116352	1222.6637712995039	2	612.3396606445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QKLLLEQHQS_	REV__ENSG00000280670|ENST00000629482|CCDC163	37.81151784470057	0.569310847604193	4				NaN	NaN	0	NaN	99	2050	2150
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2152	10.994	NaN	3426.9	30	0	496.33	0.106	+			42681	TCGTLEKEYE	10	20	586.7588127680132	1171.5030726028263	2	586.7589721679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TCGTLEKEYE_	ENSG00000138658|ENST00000505019|ZGRF1;ENST00000264370.9_1_4:113529030-113554332:-|nuORF;ENST00000514770.5_1_4:113532004-113549797:-|nuORF;nc|ENSG00000138658|Q86YA3-3|ZGRF1;nc|ENSG00000138658|Q86YA3-4|ZGRF1;nc|ENSG00000138658|Q86YA3-5|ZGRF1;nc|ENSG00000138658|Q86YA3-6|ZGRF1;ZGRF1|p.E2096Rfs*4|1|0.33|ENSG00000138658|chr4:112539576-112539577|-/T|frameshift_variant;ZGRF1|p.H772Afs*13|1|0.34|ENSG00000138658|chr4:112617729-112617730|-/T|frameshift_variant;ZGRF1|p.I715Yfs*5|1|0.35|ENSG00000138658|chr4:112617899-112617900|-/A|frameshift_variant;ZGRF1|p.K771Sfs*52|1|0.1|ENSG00000138658|chr4:112617730-112617730|T/-|frameshift_variant;ZGRF1|p.L528Wfs*3|1|0.31|ENSG00000138658|chr4:112618459-112618459|A/-|frameshift_variant;ZGRF1|p.L728Yfs*14|1|0.17|ENSG00000138658|chr4:112617859-112617859|A/-|frameshift_variant;ZGRF1|p.R2022Kfs*8|1|0.29|ENSG00000138658|chr4:112539970-112539971|-/T|frameshift_variant	9.705651100619752	0.7671300402814404	4				NaN	NaN	0	NaN	100	2050	2150
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2153	10.996	NaN	3507.3	30	0	868.58	0.106			+	-1	TMKEMVYSAM	10	22	603.7618068750527	NaN	0	603.761474609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_TMKEM(Oxidation (M))VYSAM_	REV__LRP1B|p.K2543Nfs*42|1|0.08|ENSG00000168702|chr2:140536594-140536594|T/-|frameshift_variant	13.45404412870281	0.4201028297492154	4				NaN	NaN	0	NaN	101	2050	2150
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2154	10.998	NaN	1162.3	30	0	220.2	0.106	+			4530	ATKSPAKPK	9	37	464.2850299261372	926.5555069190744	2	464.2842712402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATKSPAKPK_	ENSG00000184357|ENST00000331442|H1-5	45.97224482568171	0.3502073465782774	4				NaN	NaN	0	NaN	102	2050	2150
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2155	11	NaN	2168.9	30	0	694.96	0.037			+	11663	FQPFAMHLF	9	20	569.2803484243149	1136.5461439154296	2	569.2799682617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FQPFAMHLF_	REV__ENSG00000101557|ENST00000261601|USP14;REV__nc|ENSG00000101557|P54578-2|USP14;REV__nc|ENSG00000101557|P54578-3|USP14;REV__USP14|p.Y333Lfs*2|1|0.33|ENSG00000101557|chr18:203145-203146|-/T|frameshift_variant	12.959181472943097	0.6112419832031292	4				NaN	NaN	0	NaN	103	2050	2150
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2164	11.02	NaN	1422.5	30	0	445.5	0.143			+	50576	YCGDVDFRG	9	26	516.2157305277618	1030.4169081223235	2	516.2155151367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YCGDVDFRG_	REV__ENSG00000145029|ENST00000273598|NICN1;REV__ENST00000497742.6_1_3:49462268-49462495:-|nuORF	25.450171626174864	0.5654022654467333	4				NaN	NaN	0	NaN	109	2053	2163
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2173	11.043	NaN	2350.9	30	0	584.72	0.214	+			417	AATEGELPTH	10	30	513.2468019132931	1024.479050893386	2	513.24609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AATEGELPTH_	ENST00000522335.5_1_8:144462155-144464818:+|nuORF	35.61828744233558	0.588957954432594	4				NaN	NaN	0	NaN	115	2056	2172
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2174	11.047	NaN	2463	30	0	701.17	0.106			+	31686	QNKTQLLASK	10	46	565.8305053465598	1129.6464577599195	2	565.8304443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QNKTQLLASK_	REV__ENSG00000083535|ENST00000326291|PIBF1;REV__ENST00000469712.1_1_13:73543850-73590054:+|nuORF;REV__ENST00000489922.5_1_13:73544805-73590054:+|nuORF;REV__nc|ENSG00000083535|Q8WXW3-2|PIBF1	32.75053402867276	0.6123771875927935	4				NaN	NaN	0	NaN	116	2056	2172
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2175	11.049	NaN	1300	30	0	304.5	0.106			+	37550	SLLYYLPQ	8	19	498.77486322771625	995.5351735222325	2	498.775146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLLYYLPQ_	REV__ENSG00000180934|ENST00000641900|OR56A1;REV__ENSG00000183389|ENST00000641156|OR56A4;REV__ENSG00000184478|ENST00000641160|OR56A3;REV__ENSG00000188691|ENST00000532411|OR56A5;REV__nc|ENSG00000180934|Q8NGH5|OR56A1;REV__OR56A1|p.R302Gfs*5|1|0.22|ENSG00000180934|chr11:6026802-6026802|A/-|frameshift_variant;REV__OR56A3|p.L70P|1|0.22|ENSG00000184478|chr11:5947555-5947555|T/C|missense_variant;REV__OR56A4|p.L163*|1|0.41|ENSG00000183389|chr11:6002661-6002661|A/-|frameshift_variant;REV__OR56A5|p.H59R|1|0.23|ENSG00000188691|chr11:5968319-5968319|T/C|missense_variant	11.511019455917149	0.786409509643324	4				NaN	NaN	0	NaN	117	2056	2172
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2176	11.05	NaN	2136.6	30	0	342.17	0.106				-1	CRKYVSQKK	9	20	598.8323364257812	NaN	0	598.8323364257812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_C(Carbamidomethyl (C))RKYVSQKK_	ENSG00000151148|ENST00000342494|UBE3B;nc|ENSG00000151148|Q7Z3V4-2|UBE3B;UBE3B|p.F731Lfs*71|1|0.07|ENSG00000151148|chr12:109521260-109521260|T/-|frameshift_variant	6.735540347417125	0.4072763090772754	4				NaN	NaN	0	NaN	118	2056	2172
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2177	11.052	NaN	1704.4	30	0	453.33	0.034			+	27444	MLIPTITY	8	19	476.2638422882137	950.5131316432274	2	476.7645263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MLIPTITY_	REV__tr|U7SIS5|U7SIS5_FUSNUCRISPR-associatedendoribonucleasecas6OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02168PE=4SV=1	9.47055586587303	0.7831821681235687	4				NaN	NaN	0	NaN	119	2056	2172
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2183	11.068	NaN	2244.5	30	0	509.61	0.214	+			17550	IDVDHRNMA	9	40	535.7560552435235	1069.497557553847	2	535.7565307617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IDVDHRNMA_	CNTNAP2|p.H1113Pfs*52|1|0.35|ENSG00000174469|chr7:148229731-148229732|-/C|frameshift_variant;ENSG00000174469|ENST00000361727|CNTNAP2	17.364965105453717	0.6112419832031293	4				NaN	NaN	0	NaN	122	2059	2182
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2184	11.072	NaN	1833.9	30	0	561.24	0.106			+	50269	WRGNMQSL	8	25	496.2426305418428	990.4707081504856	2	496.7437744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WRGNMQSL_	REV__ENSG00000131018|ENST00000367255|SYNE1;REV__ENST00000367256.9_1_6:152443573-152639413:-|nuORF;REV__ENST00000460912.6_1_6:152443573-152489284:-|nuORF;REV__ENST00000478916.5_1_6:152456172-152464916:-|nuORF;REV__nc|ENSG00000131018|Q8NF91-11|SYNE1;REV__nc|ENSG00000131018|Q8NF91-2|SYNE1;REV__nc|ENSG00000131018|Q8NF91-3|SYNE1;REV__nc|ENSG00000131018|Q8NF91-4|SYNE1;REV__nc|ENSG00000131018|Q8NF91-8|SYNE1;REV__nc|ENSG00000131018|Q8NF91-9|SYNE1;REV__SYNE1|p.V8635Sfs*12|1|0.15|ENSG00000131018|chr6:152133375-152133375|T/-|frameshift_variant	12.206847966760668	0.7875100812264838	4				NaN	NaN	0	NaN	123	2059	2182
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2185	11.074	NaN	1478.2	30	0	433.45	0.034			+	24776	LIELLQDE	8	23	486.767822265625	NaN	0	486.767822265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LIELLQDE_	REV__ENSG00000171495|ENST00000399564|MROH2B;REV__MROH2B|p.D1229Tfs*15|1|0.23|ENSG00000171495|chr5:41007378-41007378|C/-|frameshift_variant;REV__nc|ENSG00000171495|Q7Z745-2|MROH2B	12.959181472943097	1.7418937515398478	4				NaN	NaN	0	NaN	124	2059	2182
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2195	11.096	NaN	5450.4	30	0	1460.4	0.214			+	28425	NEVAGYYFI	9	59	538.26061071824	NaN	0	538.2606201171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NEVAGYYFI_	REV__tr|U7T5J5|U7T5J5_FUSNUHeptaprenyldiphosphatesynthaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00171PE=3SV=1	44.377184641726394	0.24544280798894275	4				NaN	NaN	0	NaN	131	2062	2194
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2196	11.099	NaN	8445.1	30	0	2634	0.106	+			1730	AHIRMTDKK	9	44	550.3067811130213	1098.5990092928425	2	550.2404174804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AHIRMTDKK_	ENSG00000154358|ENST00000680850|OBSCN;nc|ENSG00000154358|Q5VST9-2|OBSCN;nc|ENSG00000154358|Q5VST9-3|OBSCN;nc|ENSG00000154358|Q5VST9-6|OBSCN;nc|ENSG00000154358|Q5VST9|OBSCN;OBSCN|p.H7050Tfs*22|1|0.11|ENSG00000154358|chr1:228371922-228371922|C/-|frameshift_variant;OBSCN|p.P6994Lfs*78|1|0.15|ENSG00000154358|chr1:228371756-228371756|C/-|frameshift_variant	30.317721548370564	0.5199124245378496	4				NaN	NaN	0	NaN	132	2062	2194
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2197	11.101	NaN	2354.6	30	0	369.6	0.106			+	32077	QSCLTAEEH	9	41	509.21688399436624	NaN	0	509.21624755859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QSCLTAEEH_	REV__ENSG00000007384|ENST00000262316|RHBDF1;REV__ENSG00000129667|ENST00000675367|RHBDF2;REV__ENST00000486045.1_1_16:109134-109779:-|nuORF;REV__ENST00000590168.5_1_17:74469085-74473795:-|nuORF;REV__nc|ENSG00000129667|Q6PJF5|RHBDF2;REV__RHBDF1|p.Y621H|1|0.11|ENSG00000007384|chr16:59451-59451|A/G|missense_variant	23.04248740728303	0.3589936788096251	4				NaN	NaN	0	NaN	133	2062	2194
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2198	11.103	NaN	4004.4	30	0	682.4	0.106			+	-1	LHVQNDSVCE	10	51	600.7696477453279	1199.5247425574557	2	600.7700805664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_LHVQNDSVC(Carbamidomethyl (C))E_	REV__ENSG00000080345|ENST00000444746|RIF1;REV__nc|ENSG00000080345|Q5UIP0-2|RIF1;REV__RIF1|p.E1442Gfs*4|1|0.39|ENSG00000080345|chr2:151463835-151463836|-/A|frameshift_variant;REV__RIF1|p.K1441Rfs*18|1|0.2|ENSG00000080345|chr2:151463836-151463836|A/-|frameshift_variant;REV__RIF1|p.K1505Rfs*18|3|0.3|ENSG00000080345|chr2:151464027-151464027|A/-|frameshift_variant	34.172542307311794	0.6007644933930345	4				NaN	NaN	0	NaN	134	2062	2194
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2199	11.105	NaN	6621.8	30	0	1260.2	0.106	+			44224	TRPSQCQGSLP	11	39	587.2877747079173	1172.5609964826344	2	587.7227172851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TRPSQCQGSLP_	nc|ENSG00000284690|A0A0K2S4Q6|CD300H	26.063383197487333	0.7164075632144343	4				NaN	NaN	0	NaN	135	2062	2194
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2200	11.107	NaN	4004.2	30	0	1304.5	0.106				-1	CHGTGKIPEK	10	61	563.7887960117539	1125.5630390903077	2	563.7899780273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_C(Carbamidomethyl (C))HGTGKIPEK_	tr|U7SZ69|U7SZ69_FUSNUChaperoneproteinDnaJOS=FusobacteriumnucleatumCTI-5OX=1316586GN=dnaJPE=3SV=1	64.20726635412375	0.3275756395432415	4				NaN	NaN	0	NaN	136	2062	2194
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2201	11.108	NaN	1056.1	30	0	231.23	0.035				-1	LWTVQAMD	8	20	490.22897122223867	NaN	0	490.2286682128906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_LWTVQAM(Oxidation (M))D_	ENSG00000170099|ENST00000341584|SERPINA6	12.959181472943097	1.7418937515398478	4				NaN	NaN	0	NaN	137	2062	2194
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2211	11.13	NaN	40393	30	0	15505	0.214	+			15033	GTNKVASQK	9	84	466.7619134574302	931.5092739816604	2	466.761474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTNKVASQK_	ENSG00000117519|ENST00000370206|CNN3;ENST00000401596.1_1_6:6535542-6535761:+|nuORF;nc|ENSG00000117519|Q15417-2|CNN3;nc|ENSG00000117519|Q15417-3|CNN3	134.7655990226056	0.012935733000282069	4				NaN	NaN	0	NaN	144	2065	2210
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2212	11.134	NaN	8776	30	0	3222.3	0.106				-1	MGHQSRPK	8	29	478.74063906707994	955.4667252009599	2	478.7402648925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_M(Oxidation (M))GHQSRPK_	ENST00000367627.7_1_1:179050729-179050927:+|nuORF	12.959181472943097	0.7887000251064199	4				NaN	NaN	0	NaN	145	2065	2210
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2213	11.136	NaN	3875.7	30	0	1014.3	0.106			+	32053	QRVIRMPEA	9	31	550.3067016601562	NaN	0	550.3067016601562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QRVIRMPEA_	REV__ENSG00000156858|ENST00000300835|PRR14;REV__ENST00000564946.5_1_16:30664247-30666731:+|nuORF;REV__PRR14|p.M280Nfs*19|2|0.34|ENSG00000156858|chr16:30654799-30654800|-/C|frameshift_variant;REV__PRR14|p.N318Kfs*8|1|0.15|ENSG00000156858|chr16:30654921-30654922|-/A|frameshift_variant;REV__PRR14|p.P279Qfs*2|2|0.35|ENSG00000156858|chr16:30654800-30654800|C/-|frameshift_variant	17.364965105453717	0.37820932774828947	4				NaN	NaN	0	NaN	146	2065	2210
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2214	11.138	NaN	3873.6	30	0	930.74	0.106	+			33765	RPTSDLGSFHG	11	34	587.2877747079173	1172.5609964826344	2	587.287841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RPTSDLGSFHG_	ENST00000425712.1_1_7:156265258-156395789:-|nuORF	16.71738777980365	0.7922119881075679	4				NaN	NaN	0	NaN	147	2065	2210
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2215	11.139	NaN	4535.4	30	0	859.69	0.106			+	21777	KQSYPGGEAP	10	52	517.2491266910322	1032.4837004488643	2	516.2781372070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KQSYPGGEAP_	REV__ENST00000460006.5_1_20:5174924-5175254:+|nuORF	44.377184641726394	0.5088115166961078	4				NaN	NaN	0	NaN	148	2065	2210
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2216	11.141	NaN	4754.4	30	0	1180.1	0.106	+			9545	ELEFAKSTM	9	40	528.2572234602354	NaN	0	528.2571411132812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ELEFAKSTM_	ENSG00000089639|ENST00000203556|GMIP;nc|ENSG00000089639|Q9P107-2|GMIP	30.503639358989545	0.3235605894931338	4				NaN	NaN	0	NaN	149	2065	2210
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2217	11.143	NaN	2938.4	30	0	648.51	0.036				-1	CGHSDLCDL	9	31	538.7129801590528	NaN	0	538.3277587890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))GHSDLC(Carbamidomethyl (C))DL_	ENSG00000074755|ENST00000381638|ZZEF1;ENST00000573536.1_1_17:3912804-3919778:-|nuORF	16.473147378115264	0.38122769658151995	4				NaN	NaN	0	NaN	150	2065	2210
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2226	11.163	NaN	6690.2	30	0	3067.5	0.214				-1	VVCFARNK	8	29	497.2692076460003	992.5238623588007	2	497.2686767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_VVC(Carbamidomethyl (C))FARNK_	ENSG00000101842|ENST00000217957|VSIG1;nc|ENSG00000101842|Q86XK7-2|VSIG1	14.664097394203935	0.7913966407026132	4				NaN	NaN	0	NaN	156	2068	2225
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2227	11.167	NaN	5262	30	0	758.17	0.106	+			4514	ATKKPAPEK	9	66	323.8622671598485	968.5649720797455	3	323.8622741699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATKKPAPEK_	ENSG00000174444|ENST00000307961|RPL4;ENST00000422486.1_1_3:185135285-185135612:-|nuORF;ENST00000567229.5_1_15:66791747-66793486:-|nuORF	78.26377905018397	0.10505600812668463	4				NaN	NaN	0	NaN	157	2068	2225
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2228	11.169	NaN	2101.3	30	0	454.53	0.106				-1	GGCMMNCPK	9	29	527.7015380859375	NaN	0	527.7015380859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_GGC(Carbamidomethyl (C))MMNC(Carbamidomethyl (C))PK_	SLAMF1|p.R28C|1|0.3|ENSG00000117090|chr1:160637524-160637524|G/A|missense_variant	31.954861631926434	0.3162336699109506	4				NaN	NaN	0	NaN	158	2068	2225
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2229	11.17	NaN	1260.1	30	0	287.35	0.106				-1	PVCYRCST	8	25	493.21685791015625	NaN	0	493.21685791015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_PVC(Carbamidomethyl (C))YRCST_	ENSG00000167962|ENST00000562103|ZNF598;ENST00000562988.5_1_16:2052496-2059683:-|nuORF;ENST00000565396.5_1_16:2053615-2059683:-|nuORF;nc|ENSG00000167962|Q86UK7-2|ZNF598;nc|ENSG00000167962|Q86UK7-3|ZNF598;nc|ENSG00000167962|Q86UK7|ZNF598;ZNF598|p.P646Afs*20|1|0.5|ENSG00000167962|chr16:1999075-1999076|-/G|frameshift_variant	9.47055586587303	1.741893751539848	4				NaN	NaN	0	NaN	159	2068	2225
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2230	11.172	NaN	4600.2	30	0	881.47	0.106	+			13180	GHYNASSGKF	10	48	534.2506348735534	1066.4867168139067	2	534.2506713867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GHYNASSGKF_	ENSG00000145861|ENST00000652664|C1QTNF2	19.996771675451527	0.7148376616046445	4				NaN	NaN	0	NaN	160	2068	2225
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2231	11.174	NaN	1301.5	30	0	524.17	0.106			+	-1	RLLICLAD	8	32	487.2803039550781	NaN	0	487.2803039550781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_RLLIC(Carbamidomethyl (C))LAD_	REV__ENSG00000124486|ENST00000378308|USP9X;REV__nc|ENSG00000124486|Q93008-3|USP9X;REV__USP9X|p.K2377*|1|0.88|ENSG00000124486|chrX:41229318-41229319|-/T|frameshift_variant	20.481830146152948	1.741893751539848	4				NaN	NaN	0	NaN	161	2068	2225
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2232	11.176	NaN	2495	30	0	764.36	0.036			+	10022	ERSYPEYF	8	31	545.7450239292973	NaN	0	545.3262939453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ERSYPEYF_	REV__DENND4C|p.F1650Yfs*12|1|0.38|ENSG00000137145|chr9:19358095-19358096|TT/-|frameshift_variant;REV__DENND4C|p.R1677Dfs*12|1|0.24|ENSG00000137145|chr9:19360255-19360255|A/-|frameshift_variant;REV__ENSG00000137145|ENST00000434457|DENND4C;REV__ENST00000380437.8_1_9:19290781-19335045:+|nuORF;REV__nc|ENSG00000137145|Q5VZ89-3|DENND4C;REV__nc|ENSG00000137145|Q5VZ89-5|DENND4C;REV__nc|ENSG00000137145|Q5VZ89|DENND4C	30.503639358989545	1.7418937515398478	4				NaN	NaN	0	NaN	162	2068	2225
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2242	11.198	NaN	16350	30	0	3401.4	0.214	+			40145	STQKGQIKK	9	71	509.3063683509959	1016.5981837687918	2	509.3062438964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STQKGQIKK_	ENSG00000171241|ENST00000303383|SHCBP1	148.98678547993487	0.0071052929883181565	4				NaN	NaN	0	NaN	169	2071	2241
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2243	11.201	NaN	17061	30	0	6812.2	0.106			+	50245	WPLFHSVR	8	47	521.2856282597795	1040.556703586359	2	521.2857055664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WPLFHSVR_	REV__ENSG00000122861|ENST00000372764|PLAU;REV__nc|ENSG00000122861|P00749-2|PLAU	18.324413293986947	0.7971860551947066	4				NaN	NaN	0	NaN	170	2071	2241
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2244	11.203	NaN	9764.2	30	0	2095.4	0.106			+	-1	AFPVKCHEQ	9	50	558.2673133285294	1114.5200737238588	2	558.2670288085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_AFPVKC(Carbamidomethyl (C))HEQ_	REV__TNK2|p.R290C|1|0.12|ENSG00000061938|chr3:195882070-195882070|G/A|missense_variant	23.04248740728303	0.5879033540491928	4				NaN	NaN	0	NaN	171	2071	2241
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2245	11.205	NaN	6945.6	30	0	1698.4	0.106				-1	GCGDYVGPLW	10	28	562.2483252669605	1122.4820976007209	2	562.2486572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_GC(Carbamidomethyl (C))GDYVGPLW_	ENST00000361828.6_1_3:193310987-193332528:+|nuORF;ENST00000419435.5_1_3:193311101-193321290:+|nuORF	16.473147378115264	0.7327422906225664	4				NaN	NaN	0	NaN	172	2071	2241
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2246	11.207	NaN	5702.8	30	0	1556.4	0.106				-1	FPRMSAAMR	9	36	541.7676910448497	1081.5208291564993	2	541.767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_FPRMSAAM(Oxidation (M))R_	ENSG00000179873|ENST00000589093|NLRP11;nc|ENSG00000179873|P59045-2|NLRP11;nc|ENSG00000179873|P59045-3|NLRP11	18.324413293986947	0.6112419832031293	4				NaN	NaN	0	NaN	173	2071	2241
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2247	11.209	NaN	3475.8	30	0	577.49	0.106			+	1205	AEQHKHCIG	9	46	511.74609484164245	1021.4776367500849	2	511.7459411621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEQHKHCIG_	REV__TRIM41|p.P228H|1|0.21|ENSG00000146063|chr5:181224682-181224682|C/A|missense_variant	29.14955571784316	0.5308295550522326	4				NaN	NaN	0	NaN	174	2071	2241
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2248	11.21	NaN	4755.9	30	0	2704.9	0.036			+	7098	CWLLGKRW	8	18	531.2878674995482	1060.5611820658962	2	531.2882690429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_CWLLGKRW_	REV__ENST00000382172.3_1_13:24463460-24463493:-|nuORF	9.47055586587303	0.7831821681235687	4				NaN	NaN	0	NaN	175	2071	2241
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2257	11.232	NaN	3679.2	30	0	1773.4	0.214	+			19460	KASAGSQAKDK	11	35	545.7960957761957	1089.5776386191912	2	545.7965087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KASAGSQAKDK_	ENSG00000108551|ENST00000225688|RASD1	27.047317107675042	0.7060868989289394	4				NaN	NaN	0	NaN	181	2074	2256
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2258	11.236	NaN	1862.8	30	0	741.92	0.106	+			12367	GDQSRSVDLG	10	32	517.2491266910322	1032.4837004488643	2	516.7432250976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GDQSRSVDLG_	ENSG00000173473|ENST00000254480|SMARCC1;ENST00000485737.1_1_3:47721925-47742822:-|nuORF;SMARCC1|p.N815Kfs*2|1|0.32|ENSG00000173473|chr3:47636068-47636069|-/T|frameshift_variant	25.125986553469783	0.6746423231557295	4				NaN	NaN	0	NaN	182	2074	2256
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2259	11.238	NaN	1435.8	30	0	280.18	0.035	+			24936	LKTTVLPFM	9	25	525.3058835609775	1048.5972141887548	2	525.30615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LKTTVLPFM_	ENST00000554032.1_1_14:71276930-71281887:+|nuORF	12.959181472943097	0.6112419832031292	4				NaN	NaN	0	NaN	183	2074	2256
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2263	11.252	NaN	1507.6	30	0	139.06	0.214			+	12016	FWLLCSNAM	9	23	542.7517700195312	NaN	0	542.7517700195312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FWLLCSNAM_	REV__ENST00000306156.7_1_2:46412536-46412620:+|nuORF	29.14955571784316	0.3303970763161698	4				NaN	NaN	0	NaN	184	2077	2262
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2264	11.255	NaN	1281.5	30	0	270.35	0.036	+			30755	QDNPKQKEQ	9	18	557.7760809307817	NaN	0	557.7763061523438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QDNPKQKEQ_	L1PA8_dup4283|chr8:127182799-127184390:+|1.237907765894274|0.1348659474275502|3.2|479.0|18|2|sense	11.511019455917149	0.3980220838287494	4				NaN	NaN	0	NaN	185	2077	2262
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2268	11.269	NaN	810.88	30	0	146.86	0.214	+			49407	VVTQAGHKK	9	31	484.2878112792969	NaN	0	484.2878112792969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVTQAGHKK_	ENSG00000161036|ENST00000292616|LRWD1;ENST00000473880.5_1_7:102109277-102110330:+|nuORF;LRWD1|p.L446Cfs*61|1|0.2|ENSG00000161036|chr7:102469772-102469772|C/-|frameshift_variant;LRWD1|p.V387Sfs*120|1|0.37|ENSG00000161036|chr7:102468990-102468990|G/-|frameshift_variant	40.77816245573522	0.2702456086868081	4				NaN	NaN	0	NaN	186	2080	2267
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2269	11.273	NaN	1935.2	30	0	454.43	0.106	+			4773	ATNGAHVNHR	10	36	538.7704492190516	1075.526345504903	2	538.7695922851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATNGAHVNHR_	ANKFY1|p.P691Rfs*61|1|0.4|ENSG00000185722|chr17:4182230-4182230|G/-|frameshift_variant;ENSG00000185722|ENST00000341657|ANKFY1;nc|ENSG00000185722|Q9P2R3-2|ANKFY1;nc|ENSG00000185722|Q9P2R3-4|ANKFY1	36.446750945000026	0.5818864909973037	4				NaN	NaN	0	NaN	187	2080	2267
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2270	11.275	NaN	694.34	30	0	116.63	0.033				-1	 	0	26	436.7324609763717	871.4503690195435	2	437.2332763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	188	2080	2267
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2277	11.293	NaN	2631.4	30	0	1061.4	0.214	+			15396	GTYEKAKQK	9	54	526.7908338660027	1051.5671147988053	2	526.7906494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTYEKAKQK_	ENSG00000179562|ENST00000321407|GCC1;GCC1|p.T633Afs*8|1|0.05|ENSG00000179562|chr7:127582446-127582447|-/CA|frameshift_variant	98.58198989935565	0.04066992115528678	4				NaN	NaN	0	NaN	192	2083	2276
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2278	11.296	NaN	4715.2	30	0	1156.3	0.106	+			29595	PFQWGDTHY	9	39	575.7514213731404	1149.4882898130807	2	575.7513427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PFQWGDTHY_	ENSG00000196724|ENST00000396147|ZNF418;ZNF418|p.R256Dfs*130|1|0.44|ENSG00000196724|chr19:57927415-57927415|T/-|frameshift_variant;ZNF418|p.Y398*|1|0.18|ENSG00000196724|chr19:57926987-57926988|AT/-|frameshift_variant	27.882242232435846	0.5426732730940306	4				NaN	NaN	0	NaN	193	2083	2276
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2279	11.298	NaN	1539.8	30	0	586.98	0.106			+	-1	KCCSSSSTAR	10	17	543.7358253771373	1085.4570978210745	2	543.7372436523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_KC(Carbamidomethyl (C))CSSSSTAR_	REV__ENST00000371822.9_1_X:117480074-117480137:+|nuORF	14.137123925751023	0.7446123510383054	4				NaN	NaN	0	NaN	194	2083	2276
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2280	11.3	NaN	2251.7	30	0	431.54	0.106	+			9939	EQWRAPWED	9	13	608.7731323242188	NaN	0	608.7731323242188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EQWRAPWED_	ENST00000547685.5_1_12:56231631-56233583:-|nuORF;ENST00000552872.5_1_12:56231631-56234980:-|nuORF;nc|ENSG00000123342|Q99542-5|MMP19	7.193352174278301	0.40727630907727536	4				NaN	NaN	0	NaN	195	2083	2276
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2281	11.302	NaN	1368.7	30	0	479.42	0.106	+			9172	EGPPYDWEL	9	20	553.247414004631	NaN	0	553.2476806640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EGPPYDWEL_	ENSG00000100241|ENST00000380817|SBF1;nc|ENSG00000100241|O95248-4|SBF1;nc|ENSG00000100241|O95248|SBF1	11.511019455917149	0.3980220838287494	4				NaN	NaN	0	NaN	196	2083	2276
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2282	11.304	NaN	2235.7	30	0	542.68	0.036			+	2037	AKQVEQHQE	9	24	548.7735399814695	1095.532527029739	2	549.2747192382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AKQVEQHQE_	REV__ENSG00000076382|ENST00000321765|SPAG5;REV__ENST00000580676.1_1_17:26905530-26906263:-|nuORF	14.864876125193954	0.6112419832031293	4				NaN	NaN	0	NaN	197	2083	2276
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2289	11.32	NaN	2596.3	30	0	494.07	0.214			+	50177	WLHSTWAQ	8	39	514.7510150888058	1027.4874772444116	2	514.7505493164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WLHSTWAQ_	REV__EMC1|p.F608Lfs*7|1|0.38|ENSG00000127463|chr1:19231381-19231381|A/-|frameshift_variant;REV__EMC1|p.F974Lfs*4|1|0.22|ENSG00000127463|chr1:19219363-19219363|A/-|frameshift_variant;REV__ENSG00000127463|ENST00000477853|EMC1;REV__nc|ENSG00000127463|Q8N766-2|EMC1;REV__nc|ENSG00000127463|Q8N766-3|EMC1;REV__nc|ENSG00000127463|Q8N766-4|EMC1	18.324413293986947	0.7971860551947066	4				NaN	NaN	0	NaN	201	2086	2288
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2290	11.324	NaN	2182.1	30	0	599.27	0.037				-1	SKDMVCGICM	10	19	580.2349243164062	NaN	0	580.2349243164062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_SKDM(Oxidation (M))VCGIC(Carbamidomethyl (C))M_	ENSG00000133606|ENST00000255977|MKRN1;ENST00000475010.5_1_7:140155450-140179030:-|nuORF;nc|ENSG00000133606|Q9UHC7-2|MKRN1;nc|ENSG00000133606|Q9UHC7-3|MKRN1;nc|ENSG00000133606|Q9UHC7-4|MKRN1	9.182911543092327	0.4201028297492154	4				NaN	NaN	0	NaN	202	2086	2288
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2297	11.34	NaN	9150.4	30	0	2447.3	0.214			+	32392	QVCRPVRP	8	46	477.7691320667856	953.5237112003712	2	477.7690124511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QVCRPVRP_	REV__THE1B-int_dup1996|chr7:8345870-8347393:+|1.2346957743909006|0.2358979979729452|2.39|457.0|35|3|sense	31.954861631926434	0.7126016770032289	4				NaN	NaN	0	NaN	206	2089	2296
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2298	11.344	NaN	4335.6	30	0	1290.8	0.106	+			50895	YFVPPKED	8	39	497.74837531315814	993.4821976931163	2	497.74786376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YFVPPKED_	ENSG00000198900|ENST00000361337|TOP1;TOP1|p.C453Mfs*40|1|0.27|ENSG00000198900|chr20:41112823-41112824|-/A|frameshift_variant;TOP1|p.K333Nfs*3|1|0.34|ENSG00000198900|chr20:41100075-41100075|A/-|frameshift_variant;TOP1|p.T639Lfs*6|1|0.45|ENSG00000198900|chr20:41118257-41118257|A/-|frameshift_variant	19.359975847455235	0.7988239741663654	4				NaN	NaN	0	NaN	207	2089	2296
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2299	11.346	NaN	3067.1	30	0	552.34	0.106				-1	 	0	53	494.26027131430686	493.2529948477069	1	494.2601013183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	208	2089	2296
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2300	11.348	NaN	1475.5	30	0	503.65	0.106			+	-1	SRQNCSGE	8	19	469.1940466830765	936.3735404329531	2	469.1927185058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_SRQNC(Carbamidomethyl (C))SGE_	REV__ENST00000311066.9_1_1:14032065-14042095:+|nuORF	12.959181472943097	0.7887000251064199	4				NaN	NaN	0	NaN	209	2089	2296
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2301	11.349	NaN	3546.7	30	0	989.59	0.106	+			8936	EEWQDEEF	8	20	556.2164955445088	NaN	0	556.216552734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EEWQDEEF_	ENSG00000163141|ENST00000368931|BNIPL	12.959181472943097	1.7418937515398478	4				NaN	NaN	0	NaN	210	2089	2296
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2302	11.351	NaN	1916.5	30	0	565.04	0.035				-1	QRHGMCLY	8	20	512.2293090820312	NaN	0	512.2293090820312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_QRHGM(Oxidation (M))CLY_	ENSG00000065243|ENST00000370521|PKN2;nc|ENSG00000065243|Q16513-2|PKN2;nc|ENSG00000065243|Q16513-4|PKN2;nc|ENSG00000065243|Q16513-5|PKN2	14.664097394203935	1.7418937515398478	4				NaN	NaN	0	NaN	211	2089	2296
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2312	11.375	NaN	3972.5	30	0	771.24	0.214	+			21950	KSAKTATAGPG	11	51	494.77504285719766	987.5355327811953	2	494.77459716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSAKTATAGPG_	ENSG00000131711|ENST00000296755|MAP1B	65.46538089061403	0.2746690761028526	4				NaN	NaN	0	NaN	218	2092	2311
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2313	11.378	NaN	4398.8	30	0	1006	0.106				-1	AEPVSAAPCL	10	37	507.7493590671662	1013.4841652011324	2	507.7492370605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_AEPVSAAPC(Carbamidomethyl (C))L_	ENSG00000065526|ENST00000375759|SPEN	16.473147378115264	0.7327422906225664	4				NaN	NaN	0	NaN	219	2092	2311
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2314	11.38	NaN	2588.3	30	0	511.7	0.106			+	-1	VRDMCAEM	8	32	485.69345450158903	969.3723560699781	2	485.69317626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_VRDMCAEM(Oxidation (M))_	REV__ENSG00000168243|ENST00000391854|GNG4	17.364965105453717	0.7956685240855921	4				NaN	NaN	0	NaN	220	2092	2311
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2315	11.382	NaN	1779.3	30	0	308.15	0.106	+			51	AAAPTSKAK	9	42	422.74774379029395	843.4809346473879	2	422.7479248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AAAPTSKAK_	ENSG00000128578|ENST00000249344|STRIP2;ENSG00000143093|ENST00000369795|STRIP1;ENST00000461054.1_1_1:110590211-110590492:+|nuORF;ENST00000473429.5_1_1:110584363-110592127:+|nuORF;ENST00000485775.5_1_1:110582506-110596531:+|nuORF;nc|ENSG00000128578|Q9ULQ0-2|STRIP2;nc|ENSG00000143093|Q5VSL9-2|STRIP1;nc|ENSG00000143093|Q5VSL9-3|STRIP1	65.46538089061403	0.16805504838372562	4				NaN	NaN	0	NaN	221	2092	2311
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2316	11.384	NaN	2031.6	30	0	1097.6	0.106	+			17052	HQNSDSGMC	9	20	489.6748199895995	977.335087045999	2	489.6752624511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HQNSDSGMC_	ENST00000423559.2_1_10:104377398-104377662:+|nuORF	6.735540347417125	0.6112419832031293	4				NaN	NaN	0	NaN	222	2092	2311
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2317	11.386	NaN	1244.6	30	0	354.58	0.106			+	9030	EGEGCQWI	8	29	461.1913602380516	920.3681675429032	2	461.1912536621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EGEGCQWI_	REV__ENST00000597731.1_1_19:39329605-39330760:-|nuORF	26.79610172149135	0.7524337208463756	4				NaN	NaN	0	NaN	223	2092	2311
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2318	11.387	NaN	903.8	30	0	298.84	0.033	+			50886	YFPPNPSG	8	17	439.70643201826687	877.3983111033338	2	439.70599365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YFPPNPSG_	MRPL28|p.E74Nfs*28|1|0.1|ENSG00000086504|chr16:370000-370000|G/-|frameshift_variant	10.184766708764876	0.7843118145031319	4				NaN	NaN	0	NaN	224	2092	2311
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2324	11.402	NaN	3051.2	30	0	840.06	0.214	+			50316	WTEQSQEF	8	31	527.7279052734375	NaN	0	527.7279052734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WTEQSQEF_	DNAH5|p.F4486Lfs*7|2|0.23|ENSG00000039139|chr5:13701317-13701317|A/-|frameshift_variant;DNAH5|p.I4068*|1|0.07|ENSG00000039139|chr5:13721077-13721077|T/-|frameshift_variant;ENSG00000039139|ENST00000265104|DNAH5	16.473147378115264	1.7418937515398478	4				NaN	NaN	0	NaN	227	2095	2323
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2325	11.406	NaN	2471	30	0	619.63	0.106			+	-1	DGKFSPDC	8	24	463.18895831106107	924.3633636889222	2	463.1881103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_DGKFSPDC(Carbamidomethyl (C))_	REV__ENSG00000163162|ENST00000295317|RNF149;REV__ENST00000490553.1_1_2:101898195-101898495:-|nuORF	19.359975847455235	0.7988239741663654	4				NaN	NaN	0	NaN	228	2095	2323
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2326	11.408	NaN	2276.2	30	0	657.38	0.106				-1	CSHSEDPE	8	16	480.67052994098617	959.3265069487724	2	480.6694641113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_C(Carbamidomethyl (C))SHSEDPE_	ENSG00000115464|ENST00000398571|USP34;nc|ENSG00000115464|Q70CQ2-2|USP34;nc|ENSG00000115464|Q70CQ2-3|USP34;USP34|p.L2716Sfs*30|1|0.05|ENSG00000115464|chr2:61214596-61214597|-/AAGCTGA|frameshift_variant;USP34|p.L3228*|1|0.22|ENSG00000115464|chr2:61190564-61190564|A/-|frameshift_variant;USP34|p.N788Kfs*4|1|0.42|ENSG00000115464|chr2:61343951-61343952|-/T|frameshift_variant;USP34|p.N788Yfs*3|1|0.09|ENSG00000115464|chr2:61343952-61343953|TT/-|frameshift_variant	8.822329726475273	0.7821568878176242	4				NaN	NaN	0	NaN	229	2095	2323
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2327	11.409	NaN	2721.1	30	0	690.83	0.035				-1	CDAGCSGPGGN	11	33	497.6724765346739	993.3304001361478	2	497.6712646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_C(Carbamidomethyl (C))DAGCSGPGGN_	ENSG00000204301|ENST00000375023|NOTCH4;NOTCH4|p.P1441Lfs*17|1|0.22|ENSG00000204301|chr6:32199139-32199139|G/-|frameshift_variant	12.811709888998246	0.8104996705804273	4				NaN	NaN	0	NaN	230	2095	2323
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2337	11.431	NaN	9211.5	30	0	1554.9	0.214	+			4801	ATNPTQKTK	9	71	494.77504285719766	987.5355327811953	2	494.77490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATNPTQKTK_	ENSG00000166278|ENST00000299367|C2;ENST00000497706.5_1_6:31865631-31903710:+|nuORF;nc|ENSG00000166278|P06681-2|C2;nc|ENSG00000166278|P06681-3|C2	146.78539889680295	0.007618400906539062	4				NaN	NaN	0	NaN	237	2098	2336
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2338	11.435	NaN	10034	30	0	1998	0.106				-1	RCMPKDKAI	9	63	539.2828369140625	NaN	0	539.2828369140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_RCM(Oxidation (M))PKDKAI_	ENST00000480579.2_1_8:119774141-119774438:-|nuORF	54.776311868738084	0.17377682019723872	4				NaN	NaN	0	NaN	238	2098	2336
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2339	11.437	NaN	5690	30	0	1461.4	0.106				-1	PMMPGCPMM	9	48	513.6822254859488	1025.3498980386976	2	514.2775268554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Oxidation (M)	_PMMPGCPM(Oxidation (M))M(Oxidation (M))_	ENST00000514820.1_1_3:129918586-129918748:+|nuORF	14.664097394203935	0.6112419832031292	4				NaN	NaN	0	NaN	239	2098	2336
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2340	11.439	NaN	6241	30	0	1306	0.106			+	-1	ERAANHMSVA	10	53	551.2601318359375	NaN	0	551.2601318359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_ERAANHM(Oxidation (M))SVA_	REV__ENSG00000175137|ENST00000366472|SH3BP5L;REV__ENST00000475978.1_1_1:249106101-249108957:-|nuORF;REV__nc|ENSG00000175137|Q7L8J4-2|SH3BP5L	58.22992032128504	0.24873293749302264	4				NaN	NaN	0	NaN	240	2098	2336
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2341	11.44	NaN	3804.5	30	0	1139.8	0.106			+	-1	TCCPCCVC	8	47	501.6538756019707	1001.2931982707414	2	502.2984924316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	3 Carbamidomethyl (C)	_TC(Carbamidomethyl (C))C(Carbamidomethyl (C))PC(Carbamidomethyl (C))CVC_	REV__ENSG00000155890|ENST00000286349|TRIM42;REV__nc|ENSG00000155890|Q8IWZ5-2|TRIM42;REV__TRIM42|p.N363Kfs*4|1|0.08|ENSG00000155890|chr3:140687764-140687765|-/A|frameshift_variant;REV__TRIM42|p.N363Tfs*36|1|0.16|ENSG00000155890|chr3:140687765-140687765|A/-|frameshift_variant	15.63621529709179	0.7929342111279789	4				NaN	NaN	0	NaN	241	2098	2336
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2342	11.442	NaN	4449.4	30	0	1436.1	0.106			+	-1	YMGVAYAC	8	34	475.6918842150939	949.3692154969879	2	475.6910095214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),Oxidation (M)	_YM(Oxidation (M))GVAYAC(Carbamidomethyl (C))_	REV__ENSG00000160190|ENST00000352133|SLC37A1;REV__SLC37A1|p.K340Sfs*46|1|0.19|ENSG00000160190|chr21:42562112-42562112|C/-|frameshift_variant;REV__SLC37A1|p.K364Rfs*22|1|0.24|ENSG00000160190|chr21:42563829-42563829|A/-|frameshift_variant	16.704963439144045	0.7946246187734944	4				NaN	NaN	0	NaN	242	2098	2336
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2343	11.444	NaN	3746.5	30	0	837.46	0.036			+	-1	CQPCLICC	8	19	555.7160108278758	NaN	0	555.2409057617188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	4 Carbamidomethyl (C)	_C(Carbamidomethyl (C))QPC(Carbamidomethyl (C))LIC(Carbamidomethyl (C))C(Carbamidomethyl (C))_	REV__ENST00000321599.8_2_3:49785261-49785576:-|nuORF	9.47055586587303	1.741893751539848	4				NaN	NaN	0	NaN	243	2098	2336
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2356	11.471	NaN	5726.4	30	0	1480	0.214				-1	LLRGSCHQ	8	35	506.75396512168254	1011.4933773101651	2	506.7535400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))LLRGSC(Carbamidomethyl (C))HQ_	ENST00000428216.3_1_20:3846472-3846547:+|nuORF	18.324413293986947	0.7971860551947066	4				NaN	NaN	0	NaN	253	2101	2355
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2357	11.475	NaN	4664.4	30	0	1476.1	0.106			+	32240	QTGSQSWCR	9	45	526.7348285342783	NaN	0	526.656494140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QTGSQSWCR_	REV__ENST00000496314.1_1_13:45009145-45009418:-|nuORF	26.69291269510374	0.34280015626154364	4				NaN	NaN	0	NaN	254	2101	2355
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2358	11.477	NaN	4482.5	30	0	2036.3	0.106			+	10125	ESNLSVHM	8	38	458.71453504355713	915.4145171539143	2	458.7144470214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ESNLSVHM_	REV__ENST00000434399.5_1_7:30601325-30601478:-|nuORF	24.20275056022122	0.7724576178584145	4				NaN	NaN	0	NaN	255	2101	2355
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2359	11.479	NaN	2673.4	30	0	938.33	0.106	+			42687	TCMFLGEE	8	23	465.19167209214424	928.3687912510885	2	465.1919250488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TCMFLGEE_	nc|ENSG859|P60507|ERVFC1	13.775330524044264	0.789990904165365	4				NaN	NaN	0	NaN	256	2101	2355
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2360	11.481	NaN	2796.1	30	0	902.22	0.106				-1	SSCCRPCCC	9	26	509.6547136391676	1017.2948743451352	2	510.1543273925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_SSCCRPCC(Carbamidomethyl (C))C_	CON__Q9BYQ5;CON__Q9BYQ8;ENSG00000198090|ENST00000345847|KRTAP4-6;ENSG00000198271|ENST00000343246|KRTAP4-5;ENSG00000198271|ENST00000343246|KRTAP4-5;ENSG00000204880|ENST00000333822|KRTAP4-8;ENSG00000212721|ENST00000391413|KRTAP4-11;ENSG00000212722|ENST00000391415|KRTAP4-9;ENSG00000213416|ENST00000394014|KRTAP4-12;KRTAP4-5|p.R148H|1|0.23|ENSG00000198271|chr17:41149325-41149325|C/T|missense_variant	7.690282842768113	0.6112419832031293	4				NaN	NaN	0	NaN	257	2101	2355
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2361	11.482	NaN	4246.5	30	0	1180.2	0.036			+	-1	CSDCDDCE	8	24	530.637939453125	NaN	0	530.637939453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	3 Carbamidomethyl (C)	_C(Carbamidomethyl (C))SDC(Carbamidomethyl (C))DDC(Carbamidomethyl (C))E_	REV__ENSG00000053747|ENST00000313654|LAMA3;REV__LAMA3|p.E2016Rfs*13|1|0.27|ENSG00000053747|chr18:23901164-23901164|G/-|frameshift_variant;REV__LAMA3|p.T2580Hfs*68|1|0.55|ENSG00000053747|chr18:23915376-23915376|A/-|frameshift_variant;REV__nc|ENSG00000053747|Q16787-1|LAMA3;REV__nc|ENSG00000053747|Q16787-3|LAMA3;REV__nc|ENSG00000053747|Q16787-4|LAMA3	4.316272785109212	1.7418937515398478	4				NaN	NaN	0	NaN	258	2101	2355
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2362	11.483	NaN	4248.5	30	0	752.24	0.143	+			26308	LSVPSRQSWAL	11	27	622.3417358398438	NaN	0	622.3417358398438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSVPSRQSWAL_	ENST00000359297.6_1_1:36805948-36806095:-|nuORF	15.920654212697714	0.456735970842152	4				NaN	NaN	0	NaN	259	2101	2355
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2374	11.511	NaN	2709.1	30	0	599.31	0.214	+			9909	EQQEEASRP	9	29	537.24496797165	1072.4753830101	2	536.7916259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EQQEEASRP_	ENST00000309880.5_1_11:65122263-65123353:+|nuORF	14.137123925751023	0.6112419832031292	4				NaN	NaN	0	NaN	268	2104	2373
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2375	11.514	NaN	3709.7	30	0	911.29	0.106	+			22901	KVMKDAKTK	9	49	524.8131713867188	NaN	0	524.8131713867188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVMKDAKTK_	ENSG00000198900|ENST00000361337|TOP1	53.08895987439943	0.18540527177656715	4				NaN	NaN	0	NaN	269	2104	2373
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2376	11.516	NaN	4047.3	30	0	574.69	0.106				-1	KPYKCKECGKG	11	29	649.3211611915851	1296.6277694499702	2	649.3206176757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_KPYKCKEC(Carbamidomethyl (C))GKG_	ENSG00000130818|ENST00000253115|ZNF426;ENSG00000131115|ENST00000313040|ZNF227;ENSG00000174652|ENST00000592904|ZNF266;ENSG00000186448|ENST00000344387|ZNF197;ENSG00000267508|ENST00000614994|ZNF285;ENST00000436625.1_1_7:63930096-63930567:+|nuORF;nc|ENSG00000131115|Q86WZ6-2|ZNF227;nc|ENSG00000174652|Q14584|ZNF266;nc|ENSG00000267508|Q96NJ3-2|ZNF285	11.635926663890343	0.8160050785733157	4				NaN	NaN	0	NaN	270	2104	2373
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2377	11.518	NaN	5668.3	30	0	1048.4	0.106	+			30687	QCLTSSTAALS	11	48	541.2638327090004	1080.5131124848008	2	541.26416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QCLTSSTAALS_	ENSG00000182747|ENST00000331858|SLC35D3;SLC35D3|p.R368Efs*18|1|0.25|ENSG00000182747|chr6:136924543-136924543|C/-|frameshift_variant	28.081489160057373	0.6952392775027776	4				NaN	NaN	0	NaN	271	2104	2373
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2378	11.52	NaN	1054.6	30	0	240.84	0.106	+			4372	ATGTGSKVGK	10	37	453.255859375	NaN	0	453.255859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATGTGSKVGK_	ENSG00000183207|ENST00000595090|RUVBL2;ENST00000594017.5_1_19:49497156-49513425:+|nuORF;ENST00000596247.5_1_19:49507512-49519096:+|nuORF;nc|ENSG00000183207|Q9Y230-2|RUVBL2	40.05817265558897	0.3684561582319974	4				NaN	NaN	0	NaN	272	2104	2373
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2379	11.522	NaN	1016.2	30	0	362.92	0.106			+	-1	CDSPSIMQ	8	25	469.1932373046875	NaN	0	469.1932373046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_C(Carbamidomethyl (C))DSPSIMQ_	REV__ENSG00000217128|ENST00000510461|FNIP1;REV__FNIP1|p.I925Nfs*6|1|0.21|ENSG00000217128|chr5:131671670-131671671|-/T|frameshift_variant;REV__FNIP1|p.K732Nfs*23|1|0.16|ENSG00000217128|chr5:131672248-131672248|T/-|frameshift_variant;REV__FNIP1|p.N877Kfs*2|1|0.45|ENSG00000217128|chr5:131671813-131671814|-/T|frameshift_variant;REV__FNIP1|p.P733Tfs*4|1|0.29|ENSG00000217128|chr5:131672247-131672248|-/T|frameshift_variant;REV__nc|ENSG00000217128|Q8TF40-3|FNIP1	12.959181472943097	1.7418937515398478	4				NaN	NaN	0	NaN	273	2104	2373
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2380	11.523	NaN	2159.6	30	0	655.63	0.034			+	-1	MHDPKNGAA	9	23	478.71683269113936	955.4191124490787	2	478.7167663574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_M(Oxidation (M))HDPKNGAA_	REV__ENSG00000147162|ENST00000373719|OGT;REV__nc|ENSG00000147162|O15294-2|OGT;REV__nc|ENSG00000147162|O15294-3|OGT;REV__nc|ENSG00000147162|O15294-4|OGT	11.511019455917149	0.6112419832031292	4				NaN	NaN	0	NaN	274	2104	2373
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2391	11.547	NaN	3039	30	0	722.11	0.214			+	50892	YFTSPVAPT	9	49	491.74866134040457	981.4827697476092	2	492.3031005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YFTSPVAPT_	REV__ALMS1|p.L2987Ffs*8|1|0.38|ENSG00000116127|chr2:73490911-73490911|T/-|frameshift_variant;REV__ALMS1|p.S3695Afs*27|1|0.24|ENSG00000116127|chr2:73572954-73572954|A/-|frameshift_variant;REV__ENSG00000116127|ENST00000613296|ALMS1;REV__nc|ENSG00000116127|Q8TCU4-2|ALMS1;REV__nc|ENSG00000116127|Q8TCU4-3|ALMS1	23.04248740728303	0.5879033540491928	4				NaN	NaN	0	NaN	282	2107	2390
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2392	11.551	NaN	6965.2	30	0	2580.1	0.106				-1	 	0	25	477.27169044456224	952.5288279559245	2	477.2713928222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	283	2107	2390
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2393	11.553	NaN	2565	30	0	536.88	0.106	+			5182	ATTKPPPAKK	10	43	346.88149707578657	1037.6226618275598	3	346.881591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATTKPPPAKK_	ENSG00000166197|ENST00000605788|NOLC1;nc|ENSG00000166197|Q14978-2|NOLC1;nc|ENSG00000166197|Q14978-3|NOLC1	46.45678178249821	0.4896490706773647	4				NaN	NaN	0	NaN	284	2107	2390
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2394	11.554	NaN	1741.5	30	0	472.48	0.106			+	-1	HCRGCECH	8	42	501.176785047727	NaN	0	501.308837890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_HCRGCEC(Carbamidomethyl (C))H_	REV__ENSG00000132470|ENST00000200181|ITGB4;REV__ENST00000580542.5_1_17:73720783-73737087:+|nuORF;REV__ENST00000584374.1_1_17:73727904-73735976:+|nuORF;REV__ITGB4|p.A1304Pfs*140|1|0.27|ENSG00000132470|chr17:75752287-75752287|G/-|frameshift_variant;REV__ITGB4|p.E666Rfs*103|1|0.29|ENSG00000132470|chr17:75737326-75737326|G/-|frameshift_variant;REV__ITGB4|p.P1123Lfs*37|1|0.47|ENSG00000132470|chr17:75750158-75750158|C/-|frameshift_variant;REV__ITGB4|p.T1720Rfs*13|1|0.05|ENSG00000132470|chr17:75757046-75757052|GACCACT/-|frameshift_variant;REV__nc|ENSG00000132470|P16144-2|ITGB4;REV__nc|ENSG00000132470|P16144-3|ITGB4;REV__nc|ENSG00000132470|P16144-4|ITGB4;REV__nc|ENSG00000132470|P16144-5|ITGB4	19.359975847455235	1.7418937515398478	4				NaN	NaN	0	NaN	285	2107	2390
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2395	11.556	NaN	5126.2	30	0	824.82	0.106	+			37846	SNLHALMNQ	9	47	514.253347989617	1026.492143046034	2	514.2529907226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SNLHALMNQ_	ARHGAP11A|p.L629Ifs*3|1|0.21|ENSG00000198826|chr15:32636653-32636654|-/A|frameshift_variant;ARHGAP11A|p.T646Lfs*6|1|0.08|ENSG00000198826|chr15:32636708-32636709|-/CTTTC|frameshift_variant;ENSG00000198826|ENST00000361627|ARHGAP11A;nc|ENSG00000198826|Q6P4F7-3|ARHGAP11A	39.252832667884924	0.4290233611298554	4				NaN	NaN	0	NaN	286	2107	2390
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2396	11.558	NaN	930.78	30	0	152.76	0.106			+	31428	QKNTLKET	8	24	481.269287109375	NaN	0	481.269287109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QKNTLKET_	REV__ENSG00000126860|ENST00000462804|EVI2A;REV__nc|ENSG00000126860|P22794-2|EVI2A	12.959181472943097	1.7418937515398478	4				NaN	NaN	0	NaN	287	2107	2390
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2397	11.56	NaN	572.07	30	0	62.155	0.032			+	30130	PRSAAPLL	8	40	412.7537536621094	NaN	0	412.7537536621094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PRSAAPLL_	REV__ENSG00000100056|ENST00000252137|ESS2;REV__ENST00000469466.1_1_22:19131937-19132153:-|nuORF	37.028477286268924	1.7418937515398478	4				NaN	NaN	0	NaN	288	2107	2390
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2407	11.582	NaN	8119.1	30	0	1191.8	0.214			+	17131	HSRDNFPY	8	22	518.2350577990247	1034.4555626648494	2	518.2350463867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HSRDNFPY_	REV__TMEM161B|p.L243Ffs*90|1|0.27|ENSG00000164180|chr5:88205885-88205886|-/A|frameshift_variant	12.959181472943097	0.7887000251064199	4				NaN	NaN	0	NaN	295	2110	2406
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2408	11.585	NaN	6741	30	0	4642	0.106			+	33923	RRVLVSDE	8	15	487.27504260190324	972.5355322706065	2	487.2747497558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RRVLVSDE_	REV__ADGRG6|p.F1083Lfs*9|1|0.32|ENSG00000112414|chr6:142420031-142420031|T/-|frameshift_variant;REV__ADGRG6|p.S1069Rfs*9|1|0.04|ENSG00000112414|chr6:142419991-142419992|-/GTCACATAAAA|frameshift_variant;REV__ENSG00000112414|ENST00000367609|ADGRG6;REV__nc|ENSG00000112414|Q86SQ4-2|ADGRG6;REV__nc|ENSG00000112414|Q86SQ4-4|ADGRG6;REV__nc|ENSG00000112414|Q86SQ4|ADGRG6	7.690282842768113	0.7803663624056911	4				NaN	NaN	0	NaN	296	2110	2406
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2409	11.587	NaN	5206.3	30	0	1334.6	0.106			+	30059	PQALTPPPCA	10	40	497.7547275725808	993.4949022119616	2	497.7540283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PQALTPPPCA_	REV__ENST00000418309.1_1_7:156396604-156398412:-|nuORF;REV__ENST00000440711.1_1_7:156397865-156398412:-|nuORF;REV__ENST00000447933.5_1_7:156265368-156398412:-|nuORF	18.262085536374414	0.7236521404371882	4				NaN	NaN	0	NaN	297	2110	2406
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2410	11.589	NaN	6402.6	30	0	2043.6	0.106			+	18281	IPKSSDAPPGT	11	24	535.2778719850907	NaN	0	535.27783203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IPKSSDAPPGT_	REV__CAST|p.E474Kfs*10|1|0.39|ENSG00000153113|chr5:96754695-96754695|A/-|frameshift_variant;REV__ENSG00000153113|ENST00000675179|CAST;REV__ENST00000513666.5_1_5:96073558-96090478:+|nuORF;REV__nc|ENSG00000153113|P20810-10|CAST;REV__nc|ENSG00000153113|P20810-4|CAST;REV__nc|ENSG00000153113|P20810-7|CAST;REV__nc|ENSG00000153113|P20810-8|CAST;REV__nc|ENSG00000153113|P20810-9|CAST;REV__nc|ENSG00000153113|P20810|CAST	16.71738777980365	0.456735970842152	4				NaN	NaN	0	NaN	298	2110	2406
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2411	11.591	NaN	5878.1	30	0	1875.3	0.106			+	-1	GGCACGEWRG	10	23	555.2171241500257	NaN	0	555.2177124023438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C)	_GGC(Carbamidomethyl (C))AC(Carbamidomethyl (C))GEWRG_	REV__ENST00000367109.6_1_1:206821895-206821952:+|nuORF	10.265252068803164	0.42010282974921537	4				NaN	NaN	0	NaN	299	2110	2406
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2412	11.593	NaN	5235.6	30	0	788.54	0.106			+	-1	ENEEMCPR	8	30	532.7113146654807	NaN	0	532.7118530273438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_ENEEMC(Carbamidomethyl (C))PR_	REV__DOK2|p.S129R|1|0.4|ENSG00000147443|chr8:21911947-21911947|G/T|missense_variant;REV__ENSG00000147443|ENST00000276420|DOK2	21.9598887501803	1.7418937515398478	4				NaN	NaN	0	NaN	300	2110	2406
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2413	11.594	NaN	4600.5	30	0	1322.1	0.036			+	-1	AGGCEPAPCTE	11	25	546.2110332319254	1090.4075135306507	2	546.2117309570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_AGGCEPAPC(Carbamidomethyl (C))TE_	REV__MYO1C|p.R166C|1|0.21|ENSG00000197879|chr17:1482911-1482911|G/A|missense_variant	14.864876125193954	0.8008860636109596	4				NaN	NaN	0	NaN	301	2110	2406
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2421	11.614	NaN	5561.6	30	0	1974.7	0.214				-1	VDKVMDQK	8	30	489.75100780733374	977.4874626814675	2	489.7510070800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_VDKVM(Oxidation (M))DQK_	ENSG00000138668|ENST00000313899|HNRNPD;nc|ENSG00000138668|Q14103-2|HNRNPD;nc|ENSG00000138668|Q14103-3|HNRNPD;nc|ENSG00000138668|Q14103-4|HNRNPD	16.473147378115264	0.7942579620968672	4				NaN	NaN	0	NaN	306	2113	2420
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2422	11.618	NaN	6256.4	30	0	1141.8	0.106				-1	SPSRRSGLCS	10	25	553.7718488961815	1105.529144859163	2	553.7723388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SPSRRSGLC(Carbamidomethyl (C))S_	ENSG00000136997|ENST00000621592|MYC;MYC|p.A399Cfs*18|1|0.09|ENSG00000136997|chr8:127740832-127740833|-/T|frameshift_variant;nc|ENSG00000136997|P01106-1|MYC;nc|ENSG00000136997|P01106-3|MYC	10.865556482863946	0.761236200923858	4				NaN	NaN	0	NaN	307	2113	2420
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2423	11.62	NaN	7084.9	30	0	2610.7	0.106			+	13938	GRSRSRVRA	9	32	522.8116534276613	1043.6087539221226	2	522.8113403320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GRSRSRVRA_	REV__ENSG00000101951|ENST00000218068|PAGE4	17.364965105453717	0.6112419832031293	4				NaN	NaN	0	NaN	308	2113	2420
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2424	11.621	NaN	6222.1	30	0	3194.8	0.106			+	-1	KPMHRNLAA	9	30	527.2855799061556	1052.556606879111	2	527.2852172851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_KPM(Oxidation (M))HRNLAA_	REV__ENST00000484846.1_1_11:64623516-64624089:-|nuORF	24.20275056022122	0.577060078256802	4				NaN	NaN	0	NaN	309	2113	2420
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2425	11.623	NaN	3780.1	30	0	852.2	0.106				-1	WGPDCIECP	9	22	538.7145163132395	NaN	0	538.7158203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_WGPDCIEC(Carbamidomethyl (C))P_	ENSG00000136011|ENST00000388887|STAB2;STAB2|p.D1451Efs*112|1|0.03|ENSG00000136011|chr12:103712384-103712385|-/AGTCC|frameshift_variant;STAB2|p.F1633Lfs*22|1|0.36|ENSG00000136011|chr12:103727310-103727310|T/-|frameshift_variant;STAB2|p.G114C|1|0.51|ENSG00000136011|chr12:103620476-103620476|G/T|missense_variant;STAB2|p.P2450Lfs*4|1|0.51|ENSG00000136011|chr12:103761396-103761396|C/-|frameshift_variant;STAB2|p.R1889Pfs*3|1|0.41|ENSG00000136011|chr12:103737740-103737741|-/G|frameshift_variant	12.959181472943097	0.3931207604263714	4				NaN	NaN	0	NaN	310	2113	2420
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2426	11.625	NaN	8838.6	30	0	1678.2	0.106			+	19554	KCKYSKER	8	60	549.7902003361493	1097.5658477390984	2	549.7906494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_KC(Carbamidomethyl (C))KYSKER_	REV__ENSG00000185177|ENST00000319636|ZNF479;REV__ENSG00000213096|ENST00000357002|ZNF254;REV__ENST00000472297.2_1_19:24014717-24015296:+|nuORF;REV__nc|ENSG00000213096|O75437-2|ZNF254;REV__ZNF479|p.E244*|1|0.03|ENSG00000185177|chr7:57120686-57120687|-/G|frameshift_variant;REV__ZNF479|p.K332Afs*2|1|0.05|ENSG00000185177|chr7:57120421-57120422|-/AGGC|frameshift_variant	45.9519527083369	0.6193794311207887	4				NaN	NaN	0	NaN	311	2113	2420
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2427	11.627	NaN	2628.5	30	0	587.86	0.034			+	8154	EAAIWAVY	8	35	461.73753163341155	NaN	0	461.7374267578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EAAIWAVY_	REV__ENSG00000125505|ENST00000245615|MBOAT7;REV__nc|ENSG00000125505|Q96N66-2|MBOAT7;REV__nc|ENSG00000125505|Q96N66-3|MBOAT7	24.504012794735996	1.7418937515398478	4				NaN	NaN	0	NaN	312	2113	2420
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2441	11.656	NaN	21926	30	0	16678	0.214				-1	 	0	31	512.8089341515133	1023.6033153698266	2	512.80859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	323	2116	2440
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2442	11.66	NaN	6165.4	30	0	1118.8	0.106			+	33728	RPHGKSAW	8	53	469.7525878400451	NaN	0	470.2356262207031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RPHGKSAW_	REV__ENSG00000080031|ENST00000376350|PTPRH;REV__ENST00000588559.5_1_19:55705613-55720813:-|nuORF;REV__nc|ENSG00000080031|Q9HD43-2|PTPRH;REV__nc|ENSG00000080031|Q9HD43-3|PTPRH	47.91560031466742	1.7418937515398478	4				NaN	NaN	0	NaN	324	2116	2440
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2443	11.662	NaN	7785.8	30	0	2141.4	0.106	+			20491	KEYSWPKK	8	32	533.2917701450044	1064.5689873568087	2	533.2908935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEYSWPKK_	SUFU|p.E466K|1|0.5|ENSG00000107882|chr10:102630096-102630096|G/A|missense_variant	18.262085536374414	0.7970874732053207	4				NaN	NaN	0	NaN	325	2116	2440
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2444	11.663	NaN	6610.1	30	0	839.99	0.106	+			39332	STAVGSRQK	9	62	467.25964431918794	932.5047357051759	2	467.2590026855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STAVGSRQK_	ENSG00000197321|ENST00000355867|SVIL;nc|ENSG00000197321|O95425-2|SVIL;nc|ENSG00000197321|O95425-3|SVIL;nc|ENSG00000197321|O95425-4|SVIL;SVIL|p.M1863Dfs*18|1|0.28|ENSG00000197321|chr10:29471186-29471187|-/C|frameshift_variant;SVIL|p.M1863Wfs*44|8|0.39|ENSG00000197321|chr10:29471187-29471187|C/-|frameshift_variant;SVIL|p.N2095Kfs*36|1|0.25|ENSG00000197321|chr10:29462394-29462395|-/T|frameshift_variant	136.26810882979174	0.012230845423532208	4				NaN	NaN	0	NaN	326	2116	2440
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2445	11.665	NaN	6777.7	30	0	2164.5	0.106				-1	LTEGDLRMR	9	34	566.7927251027277	1131.5708972722553	2	566.7924194335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LTEGDLRMR_	ENST00000468005.1_1_7:23455093-23455120:-|nuORF	21.9598887501803	0.5980208138527809	4				NaN	NaN	0	NaN	327	2116	2440
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2446	11.667	NaN	5262.9	30	0	1299.3	0.037			+	-1	MPTFTEEKR	9	20	577.7803955078125	NaN	0	577.7803955078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_M(Oxidation (M))PTFTEEKR_	REV__ENSG00000131153|ENST00000253462|GINS2	15.641811463095205	0.38404136392510424	4				NaN	NaN	0	NaN	328	2116	2440
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2447	11.668	NaN	4904.9	30	0	873.37	0.142				-1	MQTCEESGWS	10	27	587.2127992797809	NaN	0	587.2586059570312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_M(Oxidation (M))QTCEESGWS_	ENSG00000165124|ENST00000374469|SVEP1;nc|ENSG00000165124|Q4LDE5-3|SVEP1;SVEP1|p.Y3375Mfs*48|1|0.3|ENSG00000165124|chr9:110386012-110386012|A/-|frameshift_variant	15.641811463095205	0.4201028297492154	4				NaN	NaN	0	NaN	329	2116	2440
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2461	11.699	NaN	3624.5	30	0	1417.8	0.214				-1	FYMGECKG	8	21	475.6902639918476	NaN	0	475.2612609863281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_FYM(Oxidation (M))GECKG_	tr|U7SKX5|U7SKX5_FUSNUSWIM-typedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01980PE=4SV=1	12.206847966760668	1.7418937515398478	4				NaN	NaN	0	NaN	340	2119	2460
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2462	11.703	NaN	2603.6	30	0	409.76	0.106	+			13965	GSAPVGKQK	9	39	436.2532958984375	NaN	0	436.2532958984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSAPVGKQK_	nc|ENSG00000165138|Q68DC2-4|ANKS6	77.31757898189308	0.08057531075035683	4				NaN	NaN	0	NaN	341	2119	2460
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2463	11.705	NaN	3303.8	30	0	609.16	0.106				-1	IPVFSWCY	8	29	536.25048828125	NaN	0	536.25048828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_IPVFSWC(Carbamidomethyl (C))Y_	ENST00000236938.10_1_1:161683740-161683920:+|nuORF	31.57888975003103	1.7418937515398478	4				NaN	NaN	0	NaN	342	2119	2460
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2464	11.706	NaN	2269.6	30	0	321.05	0.106			+	28303	NEELYKDF	8	28	529.2459716796875	NaN	0	529.2459716796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NEELYKDF_	REV__tr|U7SQH7|U7SQH7_FUSNUProteinkinasedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01642PE=4SV=1	16.473147378115264	1.7418937515398478	4				NaN	NaN	0	NaN	343	2119	2460
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2465	11.708	NaN	2462.5	30	0	371.06	0.106			+	-1	EMEYTDMC	8	20	547.6773215178823	NaN	0	547.28955078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C),Oxidation (M)	_EM(Oxidation (M))EYTDMC(Carbamidomethyl (C))_	REV__ENSG00000155249|ENST00000641172|OR4K1	4.6817480819748125	1.7418937515398478	4				NaN	NaN	0	NaN	344	2119	2460
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2466	11.71	NaN	861.7	30	0	187.62	0.034	+			6969	CPRYLLGV	8	28	460.755615234375	NaN	0	460.755615234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_CPRYLLGV_	ENSG00000158485|ENST00000368168|CD1B;nc|ENSG00000158485|P29016-2|CD1B	29.841539824830324	1.7418937515398478	4				NaN	NaN	0	NaN	345	2119	2460
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2467	11.711	NaN	5008.6	30	0	1163.4	0.141			+	7865	DRFFDMRQ	8	44	557.7566971646978	1113.4988413961955	2	557.7559204101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DRFFDMRQ_	REV__ENST00000370153.6_2_1:100480902-100480953:+|nuORF	23.04248740728303	0.7814162927298575	4				NaN	NaN	0	NaN	346	2119	2460
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2478	11.738	NaN	5981.2	30	0	745.42	0.214			+	48825	VVASCSAMEK	10	53	549.2520117232962	1096.4894705133922	2	549.2521362304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_VVASC(Carbamidomethyl (C))SAM(Oxidation (M))EK_	REV__ENSG00000166446|ENST00000570137|CDYL2	77.31757898189308	0.2175361111083648	4				NaN	NaN	0	NaN	354	2122	2477
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2479	11.742	NaN	3594.7	30	0	812.08	0.106	+			39425	STDSQVKEK	9	55	511.26178540611323	NaN	0	511.2616882324219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STDSQVKEK_	ENSG00000115020|ENST00000264380|PIKFYVE	124.08010499294276	0.0015010289275841425	4				NaN	NaN	0	NaN	355	2122	2477
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2480	11.744	NaN	6894.9	30	0	1503.3	0.106				-1	RCTCKEPS	8	32	490.71868494973637	979.4228169662728	2	490.71844482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_RC(Carbamidomethyl (C))TCKEPS_	ENST00000519231.5_1_8:66692007-66693101:-|nuORF	18.324413293986947	0.7971860551947066	4				NaN	NaN	0	NaN	356	2122	2477
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2481	11.745	NaN	3243	30	0	1369.8	0.106				-1	LCGHRQAE	8	21	485.7304976472236	969.4464423612473	2	485.7298889160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_LC(Carbamidomethyl (C))GHRQAE_	ENST00000369980.7_2_X:153276977-153277313:-|nuORF	15.63621529709179	0.7929342111279789	4				NaN	NaN	0	NaN	357	2122	2477
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2482	11.747	NaN	2904.7	30	0	748.79	0.106				-1	SVDGNAQCCD	10	29	534.6909199091176	1067.3672868850351	2	534.6907348632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_SVDGNAQC(Carbamidomethyl (C))CD_	ENSG00000072818|ENST00000158762|ACAP1;ENST00000570439.1_1_17:7250283-7250895:+|nuORF	9.705651100619752	0.7671300402814404	4				NaN	NaN	0	NaN	358	2122	2477
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2483	11.749	NaN	3575.8	30	0	688.38	0.106				-1	LCESGHCCGET	11	25	598.2113933229027	1194.4082337126054	2	598.2124633789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_LCESGHC(Carbamidomethyl (C))CGET_	ENSG00000239779|ENST00000233615|WBP1;ENST00000441673.2_1_2:74684653-74687805:+|nuORF;ENST00000452361.5_1_2:74684918-74687805:+|nuORF;ENST00000473467.5_1_2:74685729-74687181:+|nuORF;WBP1|p.P184Lfs*11|1|0.23|ENSG00000239779|chr2:74460416-74460416|C/-|frameshift_variant	14.137123925751023	0.8042936413770803	4				NaN	NaN	0	NaN	359	2122	2477
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2484	11.751	NaN	1217.2	30	0	260.88	0.034				-1	PDCDPDTI	8	21	466.6847666376448	NaN	0	466.6844177246094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_PDC(Carbamidomethyl (C))DPDTI_	ENSG00000153253|ENST00000283254|SCN3A;nc|ENSG00000153253|Q9NY46-2|SCN3A;nc|ENSG00000153253|Q9NY46-4|SCN3A;nc|ENSG00000153253|Q9NY46|SCN3A;SCN3A|p.N1922Ifs*19|1|0.09|ENSG00000153253|chr2:165090388-165090388|T/-|frameshift_variant;SCN3A|p.T1958Nfs*14|1|0.29|ENSG00000153253|chr2:165090280-165090281|-/T|frameshift_variant;SCN3A|p.T1958Qfs*16|1|0.28|ENSG00000153253|chr2:165090281-165090281|T/-|frameshift_variant	13.775330524044264	1.7418937515398478	4				NaN	NaN	0	NaN	360	2122	2477
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2490	11.767	NaN	2460.1	30	0	634.83	0.214			+	-1	TDESDDMSY	9	29	539.6801947247533	NaN	0	539.6795043945312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_TDESDDM(Oxidation (M))SY_	REV__ENSG00000165392|ENST00000298139|WRN;REV__WRN|p.D1302Ifs*7|1|0.24|ENSG00000165392|chr8:31157445-31157445|C/-|frameshift_variant	7.690282842768113	0.40727630907727536	4				NaN	NaN	0	NaN	363	2125	2489
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2491	11.77	NaN	3000.2	30	0	719.53	0.106			+	32573	QWMGNEVEE	9	31	561.231689453125	NaN	0	561.231689453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QWMGNEVEE_	REV__ENST00000568121.1_1_16:34213335-34213557:-|nuORF	24.20275056022122	0.35506675290109213	4				NaN	NaN	0	NaN	364	2125	2489
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2492	11.772	NaN	2427.1	30	0	627.63	0.106				-1	QNCDCNPTT	9	30	526.6931759771473	NaN	0	526.6923217773438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_QNC(Carbamidomethyl (C))DCNPTT_	ENSG00000145244|ENST00000273857|CORIN;nc|ENSG00000145244|Q9Y5Q5-2|CORIN	14.137123925751023	0.3891339986947948	4				NaN	NaN	0	NaN	365	2125	2489
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2493	11.774	NaN	1633.1	30	0	295.91	0.106			+	16076	HCLRGGGSLG	10	31	478.74112372552304	955.4676945178461	2	478.739990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HCLRGGGSLG_	REV__ENST00000433206.6_1_17:37076299-37076548:+|nuORF	18.262085536374414	0.7236521404371882	4				NaN	NaN	0	NaN	366	2125	2489
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2494	11.776	NaN	644.03	30	0	210.72	0.033	+			20756	KGYTPYPG	8	13	441.7213913583133	881.4282297834267	2	441.72137451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KGYTPYPG_	RYR1|p.E689K|1|0.2|ENSG00000196218|chr19:38458190-38458190|G/A|missense_variant	8.231297230196988	0.7812220690224883	4				NaN	NaN	0	NaN	367	2125	2489
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2504	11.799	NaN	4966.9	30	0	953.88	0.214	+			15875	GYNALLRYE	9	38	549.7837982731979	1097.5530436131958	2	549.784423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GYNALLRYE_	ENSG00000011258|ENST00000586178|MBTD1;ENST00000591270.1_1_17:49270805-49337516:-|nuORF;nc|ENSG00000011258|Q05BQ5-3|MBTD1	20.94693142431847	0.6074874384046576	4				NaN	NaN	0	NaN	374	2128	2503
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2505	11.803	NaN	2894.5	30	0	653.9	0.106			+	-1	CMGVCDCCED	10	26	567.6555405980376	NaN	0	567.6557006835938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_C(Carbamidomethyl (C))MGVCDCCED_	REV__ENSG00000128791|ENST00000262120|TWSG1	3.6843469609004	0.4201028297492154	4				NaN	NaN	0	NaN	375	2128	2503
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2506	11.805	NaN	3849.2	30	0	920.24	0.106				-1	YKPGVDCAPCP	11	16	603.7675490710762	NaN	0	603.7688598632812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_YKPGVDCAPC(Carbamidomethyl (C))P_	ENSG00000186827|ENST00000379236|TNFRSF4;ENST00000497869.5_1_1:1146937-1148774:-|nuORF	9.705651100619752	0.456735970842152	4				NaN	NaN	0	NaN	376	2128	2503
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2507	11.807	NaN	4287.8	30	0	692.53	0.106				-1	KRYECKEC	8	26	586.7642671563153	1171.5139813794306	2	586.7650146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_KRYEC(Carbamidomethyl (C))KEC(Carbamidomethyl (C))_	ENSG00000188868|ENST00000293725|ZNF563;nc|ENSG00000188868|Q8TA94-2|ZNF563	13.775330524044264	0.789990904165365	4				NaN	NaN	0	NaN	377	2128	2503
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2508	11.808	NaN	1591.7	30	0	378.41	0.035			+	-1	TSSGCSRYC	9	23	510.6971367641987	NaN	0	510.69744873046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_TSSGC(Carbamidomethyl (C))SRYC_	REV__EIF2S3|p.I441Nfs*4|1|0.29|ENSG00000130741|chrX:24073223-24073224|-/A|frameshift_variant;REV__ENSG00000130741|ENST00000253039|EIF2S3	12.206847966760668	0.39566704307768535	4				NaN	NaN	0	NaN	378	2128	2503
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2514	11.823	NaN	5210.1	30	0	866.57	0.214	+			7837	DQGRCPEIQ	9	40	523.2405595377176	1044.466566142235	2	523.2424926757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DQGRCPEIQ_	ENST00000439119.5_1_22:21389692-21399270:-|nuORF	37.15910966729921	0.4535818937225704	4				NaN	NaN	0	NaN	381	2131	2513
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2515	11.827	NaN	3540.9	30	0	2061.3	0.106				-1	SEGELSCSK	9	26	498.7194873549972	995.4244217767945	2	498.7189636230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SEGELSC(Carbamidomethyl (C))SK_	ENSG00000133302|ENST00000265140|SLF1	15.641811463095205	0.6112419832031292	4				NaN	NaN	0	NaN	382	2131	2513
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2516	11.829	NaN	4233.5	30	0	839.51	0.106				-1	RPHKCPDCD	9	21	564.2417283613347	1126.4689037894693	2	564.2599487304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_RPHKCPDC(Carbamidomethyl (C))D_	CTCF|p.E691Sfs*30|1|0.45|ENSG00000102974|chr16:67637752-67637752|A/-|frameshift_variant;ENSG00000102974|ENST00000264010|CTCF	14.137123925751023	0.6112419832031292	4				NaN	NaN	0	NaN	383	2131	2513
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2517	11.831	NaN	4756.4	30	0	877.4	0.106				-1	 	0	22	607.1740733450608	606.1667968784608	1	608.295654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	384	2131	2513
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2518	11.832	NaN	5785	30	0	940.21	0.106			+	29238	NWDNENYY	8	34	559.2163113627223	1116.4180697922445	2	560.2882690429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NWDNENYY_	REV__ENSG00000134827|ENST00000257264|TCN1	31.954861631926434	0.7126016770032289	4				NaN	NaN	0	NaN	385	2131	2513
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2519	11.834	NaN	4789	30	0	1172.1	0.106			+	12930	GESQNYYR	8	42	508.7261400660083	1015.4377271988167	2	509.226806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GESQNYYR_	REV__nc|ENSG00000206341|P01893|HLA-H	17.364965105453717	0.7956685240855921	4				NaN	NaN	0	NaN	386	2131	2513
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2520	11.836	NaN	3547.8	30	0	561.36	0.039			+	-1	CTQLMQTCCCG	11	21	652.7302220951005	NaN	0	652.72900390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))TQLMQTCC(Carbamidomethyl (C))CG_	REV__ENST00000299106.8_2_11:134021547-134021598:+|nuORF	10.586796910825942	0.456735970842152	4				NaN	NaN	0	NaN	387	2131	2513
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2532	11.862	NaN	160730	30	0	74800	0.165				-1	 	0	62	486.2591900862907	970.5038272393814	2	486.2585144042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	396	2134	2531
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2533	11.865	NaN	62297	30	0	40924	0.106			+	28016	MWSIMEEQ	8	45	527.222096630856	1052.4296403285118	2	527.221923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MWSIMEEQ_	REV__ENSG00000146192|ENST00000274963|FGD2;REV__ENST00000464083.5_1_6:36982408-36995936:+|nuORF;REV__ENST00000493635.1_1_6:36982749-36990230:+|nuORF;REV__ENST00000494343.5_1_6:36981367-36995936:+|nuORF;REV__FGD2|p.K560Qfs*14|1|0.4|ENSG00000146192|chr6:37027495-37027496|-/G|frameshift_variant;REV__nc|ENSG00000146192|Q7Z6J4-4|FGD2	40.5726180659479	0.6527593143185008	4				NaN	NaN	0	NaN	397	2134	2531
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2534	11.867	NaN	37212	30	0	14689	0.106				-1	MLETDTFK	8	72	500.7359169766963	999.4572810201926	2	500.7353820800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))LETDTFK_	ENSG00000196655|ENST00000533632|TRAPPC4;ENST00000447216.2_1_11:118889505-118891019:+|nuORF;ENST00000531290.5_1_11:118889791-118894106:+|nuORF;nc|ENSG00000196655|Q9Y296-2|TRAPPC4	38.80614096846853	0.6637206697844082	4				NaN	NaN	0	NaN	398	2134	2531
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2535	11.869	NaN	54187	30	0	12917	0.106				-1	MEYCPPLNS	9	64	535.2201046826385	1068.425656432077	2	535.2200927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_M(Oxidation (M))EYCPPLNS_	HPS6|p.N559Mfs*54|2|0.39|ENSG00000166189|chr10:102067143-102067143|C/-|frameshift_variant	29.14955571784316	0.5308295550522326	4				NaN	NaN	0	NaN	399	2134	2531
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2536	11.871	NaN	40985	30	0	17805	0.106				-1	KAEEMLEK	8	66	497.2495911911554	992.4846294491108	2	497.2492370605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_KAEEM(Oxidation (M))LEK_	ENSG00000085831|ENST00000680483|TTC39A;nc|ENSG00000085831|Q5SRH9-2|TTC39A;nc|ENSG00000085831|Q5SRH9-4|TTC39A;nc|ENSG00000085831|Q5SRH9-6|TTC39A;nc|ENSG00000085831|Q5SRH9|TTC39A	51.33545320467046	0.5859736979383976	4				NaN	NaN	0	NaN	400	2134	2531
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2537	11.872	NaN	48936	30	0	10620	0.106			+	-1	YHHCNECF	8	63	555.1991524566931	1108.3837519801862	2	555.1981201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_YHHCNEC(Carbamidomethyl (C))F_	REV__ENSG00000162607|ENST00000339950|USP1;REV__USP1|p.N662Mfs*2|1|0.82|ENSG00000162607|chr1:62450601-62450601|A/-|frameshift_variant	24.20275056022122	0.7724576178584145	4				NaN	NaN	0	NaN	401	2134	2531
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2538	11.874	NaN	33781	30	0	9043.5	0.036				-1	CLGSDEQNC	9	71	541.6980222022083	1081.3814914712166	2	541.6986694335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))LGSDEQNC(Carbamidomethyl (C))_	ENST00000453909.3_1_X:46387515-46388371:-|nuORF	31.954861631926434	0.5046124803899898	4				NaN	NaN	0	NaN	402	2134	2531
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2550	11.898	NaN	56812	30	0	23073	0.201			+	7420	DEQFAFKQ	8	70	506.74198218705004	1011.4694114409001	2	506.74114990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DEQFAFKQ_	REV__ENSG00000146410|ENST00000420702|MTFR2	71.29570347882199	0.39610197767395533	4				NaN	NaN	0	NaN	411	2137	2549
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2551	11.902	NaN	53618	30	0	22723	0.106			+	-1	SFYDSCIC	8	68	547.2019108391512	1092.3892687451023	2	547.7033081054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term),2 Carbamidomethyl (C)	_(Acetyl (Protein N-term))SFYDSC(Carbamidomethyl (C))IC(Carbamidomethyl (C))_	REV__ENST00000552296.6_1_12:53861622-53862597:+|nuORF	28.2542754592877	0.7411748056684583	4				NaN	NaN	0	NaN	412	2137	2549
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2552	11.904	NaN	43059	30	0	9284.8	0.106				-1	QEHCNGSDCQ	10	61	589.2038378406825	1176.3931227481648	2	589.2039794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_QEHC(Carbamidomethyl (C))NGSDCQ_	ENSG00000091136|ENST00000222399|LAMB1;ENST00000476039.1_1_7:107582891-107594053:-|nuORF;LAMB1|p.T1709Lfs*22|3|0.29|ENSG00000091136|chr7:107924329-107924329|T/-|frameshift_variant	24.519189625965996	0.6795976720565101	4				NaN	NaN	0	NaN	413	2137	2549
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2553	11.906	NaN	43897	30	0	15804	0.106			+	44195	TRDSWYIF	8	60	544.264435192813	1086.514317452426	2	544.2645263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TRDSWYIF_	REV__ENSG00000123384|ENST00000243077|LRP1;REV__LRP1|p.R3469Gfs*24|2|0.38|ENSG00000123384|chr12:57201552-57201552|C/-|frameshift_variant	26.79610172149135	0.7524337208463756	4				NaN	NaN	0	NaN	414	2137	2549
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2554	11.907	NaN	56474	30	0	16060	0.106			+	33746	RPPRSCCCCC	10	61	564.2051609240077	1126.3957689148153	2	564.2055053710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RPPRSCCCCC_	REV__ENST00000498308.1_1_7:5111775-5112846:+|nuORF	14.864876125193954	0.7409144161711139	4				NaN	NaN	0	NaN	415	2137	2549
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2555	11.909	NaN	64512	30	0	13177	0.083			+	-1	GSPCCTMCY	9	62	568.1855705324199	1134.3565881316397	2	568.1853637695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	3 Carbamidomethyl (C)	_GSPC(Carbamidomethyl (C))C(Carbamidomethyl (C))TMC(Carbamidomethyl (C))Y_	REV__NLGN4X|p.T83Lfs*53|2|0.09|ENSG00000146938|chrX:6151221-6151221|G/-|frameshift_variant	23.04248740728303	0.5879033540491928	4				NaN	NaN	0	NaN	416	2137	2549
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2556	11.911	NaN	71594	30	0	12650	0.106	+			32146	QSPARRRR	8	72	513.8040933032355	1025.593633673271	2	513.80419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QSPARRRR_	ENST00000215912.9_3_22:31688284-31688368:-|nuORF	35.61828744233558	0.6843154725607303	4				NaN	NaN	0	NaN	417	2137	2549
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2557	11.912	NaN	45240	30	0	9531.3	0.038			+	-1	ECESMMQEK	9	57	594.2250564963263	1186.4355600594524	2	594.2269287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Carbamidomethyl (C),Oxidation (M)	_EC(Carbamidomethyl (C))ESM(Oxidation (M))MQEK_	REV__C7|p.T814M|1|0.3|ENSG00000112936|chr5:40981482-40981482|C/T|missense_variant	14.864876125193954	0.6112419832031293	4				NaN	NaN	0	NaN	418	2137	2549
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2565	11.932	NaN	36232	30	0	13503	0.214			+	1554	AGFKSYCME	9	60	518.2181125341248	1034.4216721350494	2	518.2171020507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AGFKSYCME_	REV__ENST00000443260.1_1_X:144712299-144712695:+|nuORF	32.81241826257853	0.4965981579233955	4				NaN	NaN	0	NaN	423	2140	2564
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2566	11.936	NaN	38885	30	0	5921.2	0.106			+	-1	MKIDCSQK	8	59	513.2408402950695	1024.4671276569388	2	513.2412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))KIDC(Carbamidomethyl (C))SQK_	REV__ENSG00000256223|ENST00000248211|ZNF10	29.14955571784316	0.7342621283720113	4				NaN	NaN	0	NaN	424	2140	2564
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2567	11.937	NaN	37819	30	0	6944.7	0.106				-1	NCVAQCSPDDG	11	58	583.2134912621892	1164.4124295911784	2	583.2140502929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_NC(Carbamidomethyl (C))VAQCSPDDG_	ENST00000594943.1_1_19:58038790-58063865:+|nuORF	25.57405402267927	0.7215402271931856	4				NaN	NaN	0	NaN	425	2140	2564
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2568	11.939	NaN	26082	30	0	9581.6	0.106	+			28922	NRCDARTYC	9	63	551.232235009482	1100.449917085764	2	551.2323608398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NRCDARTYC_	ENSG00000177192|ENST00000376649|PUS1;ENST00000543754.1_1_12:132425763-132428128:+|nuORF;nc|ENSG00000177192|Q9Y606-2|PUS1;PUS1|p.T320Qfs*72|1|0.08|ENSG00000177192|chr12:131941704-131941704|C/-|frameshift_variant	21.9598887501803	0.5980208138527809	4				NaN	NaN	0	NaN	426	2140	2564
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2569	11.941	NaN	6885.9	30	0	2721.2	0.106	+			21959	KSAYEQFI	8	57	493.2534416632155	984.492330393231	2	493.2533874511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KSAYEQFI_	COG3|p.C697Y|1|0.26|ENSG00000136152|chr13:45519030-45519030|G/A|missense_variant	37.15910966729921	0.6739408393984688	4				NaN	NaN	0	NaN	427	2140	2564
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2570	11.943	NaN	36956	30	0	10966	0.106			+	-1	YEEGFCDCE	9	63	576.1840810426954	1150.3536091521908	2	576.18359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_YEEGFCDC(Carbamidomethyl (C))E_	REV__ENST00000433802.1_1_13:19591436-19592828:-|nuORF	23.04248740728303	0.5879033540491928	4				NaN	NaN	0	NaN	428	2140	2564
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2571	11.945	NaN	26509	30	0	6597.2	0.038				-1	ECYHCEDCR	9	45	607.705522337357	1213.396491741514	2	607.6768188476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_EC(Carbamidomethyl (C))YHCEDCR_	ENSG00000129474|ENST00000262713|AJUBA;nc|ENSG00000129474|Q96IF1-2|AJUBA	11.511019455917149	0.6112419832031292	4				NaN	NaN	0	NaN	429	2140	2564
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2576	11.958	NaN	51753	30	0	15736	0.214				-1	GESLEMDSDE	10	55	564.2051609240077	1126.3957689148153	2	564.2054443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_GESLEM(Oxidation (M))DSDE_	ENSG00000181090|ENST00000460843|EHMT1;ENST00000371394.6_1_9:140611085-140686569:+|nuORF;nc|ENSG00000181090|Q9H9B1-3|EHMT1;nc|ENSG00000181090|Q9H9B1-4|EHMT1	34.172542307311794	0.6007644933930345	4				NaN	NaN	0	NaN	431	2143	2575
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2577	11.962	NaN	34840	30	0	8149	0.106				-1	EGPCPCPTEQ	10	57	559.2163113627223	1116.4180697922445	2	559.216552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_EGPCPC(Carbamidomethyl (C))PTEQ_	ENSG00000107742|ENST00000373109|SPOCK2;SPOCK2|p.C313Lfs*37|1|0.5|ENSG00000107742|chr10:72064232-72064233|-/G|frameshift_variant	25.57405402267927	0.6709832231498071	4				NaN	NaN	0	NaN	432	2143	2575
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2578	11.964	NaN	3353.9	30	0	1600.5	0.106	+			34432	RTVGVSKKK	9	46	334.8853681337844	1001.6342750015533	3	334.8855285644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RTVGVSKKK_	ENSG00000231500|ENST00000439602|RPS18;ENST00000412454.1_1_17:14608395-14608521:-|nuORF	41.42661286455405	0.403525789677298	4				NaN	NaN	0	NaN	433	2143	2575
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2579	11.966	NaN	25499	30	0	4888.4	0.106				-1	 	0	41	624.1772460043912	623.1699695377912	1	624.1768188476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	434	2143	2575
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2580	11.967	NaN	34576	30	0	8754.5	0.106			+	-1	GGCGYGLCGYY	11	49	585.2238712670537	1168.4331896009073	2	585.224853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_GGCGYGLC(Carbamidomethyl (C))GYY_	REV__KRTAP19-7|p.G10C|1|0.13|ENSG00000244362|chr21:30561262-30561262|C/A|missense_variant	24.20275056022122	0.7359240821686345	4				NaN	NaN	0	NaN	435	2143	2575
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2581	11.969	NaN	5596.7	30	0	1559.8	0.106	+			31273	QHSVMVRP	8	49	477.25326560158464	952.4919782699693	2	477.25238037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QHSVMVRP_	ENST00000482360.5_1_1:6646544-6646703:+|nuORF	35.200714571348534	0.6875396545722289	4				NaN	NaN	0	NaN	436	2143	2575
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2582	11.971	NaN	27432	30	0	5117.6	0.038			+	-1	WCCSSCECM	9	48	611.6788021820176	NaN	0	611.677001953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	3 Carbamidomethyl (C)	_WC(Carbamidomethyl (C))C(Carbamidomethyl (C))SSCEC(Carbamidomethyl (C))M_	REV__ENST00000498611.5_1_22:50657800-50659866:-|nuORF	11.511019455917149	0.3980220838287494	4				NaN	NaN	0	NaN	437	2143	2575
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2583	11.972	NaN	22459	30	0	3429.7	0.144				-1	VCCCSCSSCGS	11	48	662.1998365987482	NaN	0	662.2001342773438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	5 Carbamidomethyl (C)	_VC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))SC(Carbamidomethyl (C))SSC(Carbamidomethyl (C))GS_	ENSG00000205869|ENST00000382171|KRTAP5-1	5.55782384252955	0.456735970842152	4				NaN	NaN	0	NaN	438	2143	2575
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2590	11.989	NaN	26144	30	0	8653.8	0.214	+			43831	TLSPDEDGVC	10	63	518.2181125341248	1034.4216721350494	2	518.7198486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TLSPDEDGVC_	ENSG00000107099|ENST00000432829|DOCK8;nc|ENSG00000107099|Q8NF50-2|DOCK8;nc|ENSG00000107099|Q8NF50-3|DOCK8;nc|ENSG00000107099|Q8NF50-4|DOCK8	20.94693142431847	0.7087701759873708	4				NaN	NaN	0	NaN	442	2146	2589
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2591	11.993	NaN	72989	30	0	20299	0.106			+	-1	KLSCTMRM	8	56	493.2357800875449	984.4570072418899	2	493.2354431152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_KLSCTMRM(Oxidation (M))_	REV__ENST00000263341.6_1_2:113593144-113593760:-|nuORF	29.14955571784316	0.7342621283720113	4				NaN	NaN	0	NaN	443	2146	2589
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2592	11.995	NaN	5594.1	30	0	1388.9	0.106			+	2935	ASCVCKGV	8	38	383.68236449156603	765.3501760499321	2	383.6824951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASCVCKGV_	REV__ENST00000585350.1_2_19:9785370-9785574:-|nuORF	19.359975847455235	0.7988239741663654	4				NaN	NaN	0	NaN	444	2146	2589
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2593	11.997	NaN	19716	30	0	4849	0.106				-1	 	0	51	596.1636673188473	595.1563908522472	1	596.1615600585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	445	2146	2589
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2594	11.999	NaN	17356	30	0	3800	0.038				-1	EEFCCEDCM	9	36	611.6788021820176	NaN	0	611.6766967773438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C)	_EEFC(Carbamidomethyl (C))CEDC(Carbamidomethyl (C))M_	ENSG00000163867|ENST00000357182|ZMYM6;ENST00000493328.5_1_1:35455862-35480681:-|nuORF;nc|ENSG00000163867|O95789-1|ZMYM6;ZMYM6|p.F804Lfs*6|1|0.38|ENSG00000163867|chr1:34988670-34988670|A/-|frameshift_variant;ZMYM6|p.I637Yfs*14|1|0.36|ENSG00000163867|chr1:35005177-35005177|T/-|frameshift_variant;ZMYM6|p.L686Ifs*41|1|0.03|ENSG00000163867|chr1:34992324-34992325|-/GAAAGGAAAAGAAAAT|frameshift_variant;ZMYM6|p.N1298Ifs*9|1|0.15|ENSG00000163867|chr1:34987189-34987189|T/-|frameshift_variant;ZMYM6|p.N724Mfs*15|1|0.42|ENSG00000163867|chr1:34988911-34988911|T/-|frameshift_variant	3.6843469609004	0.40727630907727536	4				NaN	NaN	0	NaN	446	2146	2589
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2605	12.023	NaN	21197	30	0	4120.6	0.214				-1	DKGEVYSCG	9	61	507.7129154917114	1013.4112780502228	2	507.71246337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_DKGEVYSC(Carbamidomethyl (C))G_	ENSG00000274523|ENST00000610322|RCC1L;ENST00000420642.1_7:74765936-74789271:+|nuORF;nc|ENSG00000274523|Q96I51-2|RCC1L;nc|ENSG00000274523|Q96I51-3|RCC1L	44.116797842482775	0.37197099687881774	4				NaN	NaN	0	NaN	454	2149	2604
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2606	12.026	NaN	22571	30	0	12504	0.106			+	-1	PRCCTPQCC	9	51	534.199266168885	NaN	0	534.198974609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_PRCC(Carbamidomethyl (C))TPQCC_	REV__CON__Q9BYQ5;REV__CON__Q9BYQ5;REV__CON__Q9BYQ5;REV__CON__Q9BYQ8;REV__ENSG00000171396|ENST00000390661|KRTAP4-4;REV__ENSG00000198090|ENST00000345847|KRTAP4-6;REV__ENSG00000198090|ENST00000345847|KRTAP4-6;REV__ENSG00000198090|ENST00000345847|KRTAP4-6;REV__ENSG00000198271|ENST00000343246|KRTAP4-5;REV__ENSG00000204880|ENST00000333822|KRTAP4-8;REV__ENSG00000212721|ENST00000391413|KRTAP4-11;REV__ENSG00000212721|ENST00000391413|KRTAP4-11;REV__ENSG00000212722|ENST00000391415|KRTAP4-9;REV__ENSG00000213416|ENST00000394014|KRTAP4-12;REV__ENSG00000213416|ENST00000394014|KRTAP4-12;REV__ENSG00000213416|ENST00000394014|KRTAP4-12;REV__ENSG00000240871|ENST00000391417|KRTAP4-7;REV__ENSG00000240871|ENST00000391417|KRTAP4-7;REV__ENSG00000241241|ENST00000440582|KRTAP4-16;REV__KRTAP4-12|p.V54A|1|0.29|ENSG00000213416|chr17:41123962-41123962|A/G|missense_variant;REV__KRTAP4-9|p.S108N|1|0.32|ENSG00000212722|chr17:41105711-41105711|G/A|missense_variant	16.473147378115264	0.38122769658151995	4				NaN	NaN	0	NaN	455	2149	2604
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2607	12.028	NaN	19952	30	0	4272.3	0.106				-1	 	0	44	559.1995575991438	558.1922811325437	1	559.1995239257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	456	2149	2604
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2608	12.03	NaN	14359	30	0	3471.7	0.106			+	-1	FPQCSCCHT	9	49	541.6980222022083	1081.3814914712166	2	542.1965942382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_FPQC(Carbamidomethyl (C))SCCHT_	REV__ENST00000532749.1_1_11:118402200-118402577:+|nuORF	18.324413293986947	0.6112419832031293	4				NaN	NaN	0	NaN	457	2149	2604
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2609	12.032	NaN	15120	30	0	3772.8	0.106				-1	CVSCSNCKK	9	49	514.7183832430129	1027.4222135528257	2	513.7175903320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_C(Carbamidomethyl (C))VSCSNCKK_	ENSG00000067182|ENST00000162749|TNFRSF1A;ENST00000537842.5_1_12:6439038-6442545:-|nuORF;nc|ENSG00000067182|P19438-2|TNFRSF1A	20.94693142431847	0.6074874384046576	4				NaN	NaN	0	NaN	458	2149	2604
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2610	12.034	NaN	9791	30	0	1949.8	0.106			+	-1	EIVHSCTPG	9	58	500.23029477795274	NaN	0	500.2301940917969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_EIVHSC(Carbamidomethyl (C))TPG_	REV__ENSG00000167525|ENST00000682792|PROCA1;REV__nc|ENSG00000167525|Q8NCQ7-2|PROCA1;REV__nc|ENSG00000167525|Q8NCQ7-3|PROCA1;REV__nc|ENSG00000167525|Q8NCQ7|PROCA1;REV__PROCA1|p.I159Sfs*14|1|0.48|ENSG00000167525|chr17:28704095-28704095|G/-|frameshift_variant	38.80614096846853	0.28164298475537564	4				NaN	NaN	0	NaN	459	2149	2604
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2611	12.035	NaN	14266	30	0	3988.1	0.036				-1	LELCGHWPP	9	42	554.7675862704049	NaN	0	554.6805419921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_LELC(Carbamidomethyl (C))GHWPP_	ENST00000559491.1_1_14:24629014-24629779:+|nuORF	26.79610172149135	0.34227917631780574	4				NaN	NaN	0	NaN	460	2149	2604
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2622	12.061	NaN	9550.6	30	0	2075.2	0.214	+			27322	MHLTAWPQG	9	54	549.7540070963742	NaN	0	550.2232666015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))M(Oxidation (M))HLTAWPQG_	ENST00000357254.8_1_16:71488064-71490690:-|nuORF;ENST00000393539.6_1_16:71488114-71490699:-|nuORF;ENST00000497160.5_1_16:71488061-71490699:-|nuORF	42.396135135203025	0.2590952873412954	4				NaN	NaN	0	NaN	468	2152	2621
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2623	12.065	NaN	10665	30	0	2109	0.106			+	13609	GLWTPLLTMC	10	32	567.7881464163601	1133.56173989952	2	567.7880249023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GLWTPLLTMC_	REV__ENSG00000167608|ENST00000619895|TMC4;REV__nc|ENSG00000167608|Q7Z404-1|TMC4;REV__nc|ENSG00000167608|Q7Z404|TMC4;REV__TMC4|p.F240Lfs*221|1|0.42|ENSG00000167608|chr19:54168267-54168268|AA/-|frameshift_variant;REV__TMC4|p.Q383Rfs*6|1|0.37|ENSG00000167608|chr19:54163872-54163872|G/-|frameshift_variant	15.641811463095205	0.7369665665077569	4				NaN	NaN	0	NaN	469	2152	2621
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2624	12.067	NaN	2041.2	30	0	526.68	0.106			+	-1	KCFSIACS	8	24	458.2087707519531	NaN	0	458.2087707519531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_KC(Carbamidomethyl (C))FSIACS_	REV__ENSG00000157106|ENST00000446231|SMG1;REV__nc|ENSG00000157106|Q96Q15-2|SMG1;REV__nc|ENSG00000157106|Q96Q15-3|SMG1;REV__nc|ENSG00000157106|Q96Q15-4|SMG1;REV__SMG1|p.A3214Rfs*29|1|0.06|ENSG00000157106|chr16:18828132-18828133|-/ATTTTCT|frameshift_variant	14.664097394203935	1.7418937515398478	4				NaN	NaN	0	NaN	470	2152	2621
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2625	12.069	NaN	1492	30	0	156.76	0.106			+	-1	VMVGPGHR	8	25	434.7266540527344	NaN	0	434.7266540527344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_VM(Oxidation (M))VGPGHR_	REV__ENSG00000178038|ENST00000318962|ALS2CL;REV__ENST00000434140.5_2_3:46717393-46723043:-|nuORF;REV__nc|ENSG00000178038|Q60I27-2|ALS2CL;REV__nc|ENSG00000178038|Q60I27-3|ALS2CL	15.63621529709179	1.7418937515398478	4				NaN	NaN	0	NaN	471	2152	2621
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2626	12.07	NaN	2391.4	30	0	358.8	0.106			+	-1	ARPSSPCAD	9	40	480.712646484375	NaN	0	480.712646484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_ARPSSPC(Carbamidomethyl (C))AD_	REV__ENST00000531280.1_1_11:65397907-65401612:+|nuORF	17.364965105453717	0.37820932774828947	4				NaN	NaN	0	NaN	472	2152	2621
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2627	12.072	NaN	8563.2	30	0	1961.5	0.106				-1	NRMSCRCGAQ	10	38	599.7457770669503	NaN	0	599.6798095703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),Oxidation (M)	_NRM(Oxidation (M))SCRC(Carbamidomethyl (C))GAQ_	ENSG00000011275|ENST00000389902|RNF216;nc|ENSG00000011275|Q9NWF9-3|RNF216;nc|ENSG00000011275|Q9NWF9|RNF216	14.137123925751023	0.4201028297492154	4				NaN	NaN	0	NaN	473	2152	2621
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2628	12.074	NaN	8130.2	30	0	1415.9	0.037				-1	CCCEDNFCN	9	45	582.6625176612489	NaN	0	582.6621704101562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))CCEDNFC(Carbamidomethyl (C))N_	ACVR2B|p.G106D|1|0.07|ENSG00000114739|chr3:38477917-38477917|G/A|missense_variant	7.690282842768113	0.40727630907727536	4				NaN	NaN	0	NaN	474	2152	2621
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2642	12.104	NaN	7724.6	30	0	1885.6	0.214	+			31626	QMGGGRDSEEM	11	40	598.7386474609375	NaN	0	598.7386474609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QMGGGRDSEEM_	DNAJB4|p.R115Q|1|0.32|ENSG00000162616|chr1:78013183-78013183|G/A|missense_variant	23.52269567125451	0.456735970842152	4				NaN	NaN	0	NaN	485	2155	2641
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2643	12.107	NaN	6635.2	30	0	980.27	0.106				-1	MCMYCPCFC	9	28	636.1946674114075	NaN	0	635.7205200195312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	3 Carbamidomethyl (C)	_MC(Carbamidomethyl (C))MYCPC(Carbamidomethyl (C))FC(Carbamidomethyl (C))_	ENST00000449959.6_1_12:10124132-10131716:+|nuORF	4.316272785109212	0.4072763090772754	4				NaN	NaN	0	NaN	486	2155	2641
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2644	12.109	NaN	7420.7	30	0	1701.6	0.106				-1	MDPGSVGMSH	10	57	538.2127463329014	1074.4109397326026	2	537.775146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))M(Oxidation (M))DPGSVGMSH_	ENST00000374409.5_1_1:24684664-24685051:-|nuORF	26.69291269510374	0.6618461711292317	4				NaN	NaN	0	NaN	487	2155	2641
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2645	12.111	NaN	6783.8	30	0	1278.5	0.106			+	-1	CHSCGPSYF	9	35	557.7097515369908	1113.4049501407815	2	558.208251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))HSC(Carbamidomethyl (C))GPSYF_	REV__DNAJC10|p.N376Kfs*2|1|0.35|ENSG00000077232|chr2:182741286-182741287|-/A|frameshift_variant;REV__DNAJC10|p.P639Qfs*22|1|0.47|ENSG00000077232|chr2:182757788-182757788|T/-|frameshift_variant;REV__ENSG00000077232|ENST00000264065|DNAJC10;REV__ENST00000494462.1_1_2:183586783-183593427:+|nuORF;REV__nc|ENSG00000077232|Q8IXB1-2|DNAJC10;REV__nc|ENSG00000077232|Q8IXB1-3|DNAJC10	12.959181472943097	0.6112419832031292	4				NaN	NaN	0	NaN	488	2155	2641
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2646	12.113	NaN	3200.1	30	0	574.97	0.106			+	41630	SVQRRLSE	8	58	487.7724541784584	973.5303554237169	2	488.6518859863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVQRRLSE_	REV__ENSG00000159650|ENST00000290868|UROC1;REV__nc|ENSG00000159650|Q96N76-2|UROC1	40.77816245573522	0.6514838689002179	4				NaN	NaN	0	NaN	489	2155	2641
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2647	12.115	NaN	7007.1	30	0	1598.2	0.037				-1	CDMMEGKCP	9	27	572.2005095098508	1142.3864660865015	2	572.2002563476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Carbamidomethyl (C),Oxidation (M)	_C(Carbamidomethyl (C))DM(Oxidation (M))MEGKC(Carbamidomethyl (C))P_	ENSG00000159202|ENST00000360943|UBE2Z;ENST00000513342.5_1_17:46990150-47004493:+|nuORF;nc|ENSG00000159202|Q9H832-2|UBE2Z	7.193352174278301	0.6112419832031293	4				NaN	NaN	0	NaN	490	2155	2641
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2648	12.115	NaN	8984.2	30	0	3318.5	0.14	+			11188	FHCPSPKK	8	53	472.24322815867487	942.4719033841498	2	472.2425842285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FHCPSPKK_	ENSG00000125703|ENST00000317868|ATG4C	53.351449002276354	0.5676011784961348	4				NaN	NaN	0	NaN	491	2155	2641
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2661	12.144	NaN	3239.3	30	0	1080.3	0.214	+			22553	KTSEAKKK	8	57	460.2823474330577	918.5501419329154	2	460.2819519042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTSEAKKK_	NUP153|p.E1073Kfs*44|1|0.07|ENSG00000124789|chr6:17628983-17628983|T/-|frameshift_variant	93.19546047674547	0.2677966331495483	4				NaN	NaN	0	NaN	501	2158	2660
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2662	12.148	NaN	16866	30	0	7610.8	0.106	+			51072	YLMPENVVE	9	46	547.264589081688	1092.5146252301759	2	547.264892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YLMPENVVE_	ENSG00000185189|ENST00000442628|NRBP2;ENST00000423469.6_1_8:144917834-144920143:-|nuORF;ENST00000529747.5_1_8:144917890-144921694:-|nuORF;nc|ENSG00000185189|Q9NSY0-2|NRBP2;nc|ENSG00000185189|Q9NSY0-4|NRBP2	44.116797842482775	0.37197099687881774	4				NaN	NaN	0	NaN	502	2158	2660
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2663	12.15	NaN	2900.4	30	0	579.67	0.106	+			49980	WAGVSSFSSG	10	32	492.7240905761719	NaN	0	492.7240905761719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_WAGVSSFSSG_	nc|ENSG00000187905|Q6ZQY2-2|LRRC74B	17.364965105453717	0.4201028297492154	4				NaN	NaN	0	NaN	503	2158	2660
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2664	12.152	NaN	4519.3	30	0	833.01	0.106	+			37879	SNVNLTCQF	9	37	513.2408402950695	1024.4671276569388	2	513.2061767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SNVNLTCQF_	ENSG00000170571|ENST00000303221|EMB;ENST00000505896.5_1_5:49695109-49707239:-|nuORF;nc|ENSG00000170571|Q6PCB8-2|EMB	23.04248740728303	0.5879033540491928	4				NaN	NaN	0	NaN	504	2158	2660
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2665	12.153	NaN	8073.5	30	0	1268.4	0.106				-1	PCGQFCCCEV	10	66	601.7060387976652	NaN	0	601.7867431640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C)	_PC(Carbamidomethyl (C))GQFC(Carbamidomethyl (C))CCEV_	ENSG00000196187|ENST00000366835|TMEM63A	29.14955571784316	0.4044631218331212	4				NaN	NaN	0	NaN	505	2158	2660
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2666	12.155	NaN	9240.3	30	0	3472.9	0.037			+	-1	MCWAMKMW	8	34	588.2281135490574	1174.4416741649147	2	588.2276611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),2 Oxidation (M)	_MC(Carbamidomethyl (C))WAM(Oxidation (M))KM(Oxidation (M))W_	REV__ENST00000413878.1_2_18:25593774-25593855:-|nuORF	13.775330524044264	0.789990904165365	4				NaN	NaN	0	NaN	506	2158	2660
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2667	12.156	NaN	7276.7	30	0	2380.4	0.142				-1	WTEMDCMIS	9	39	566.2116663429013	1130.4087797526024	2	566.2108154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_WTEMDCM(Oxidation (M))IS_	ENST00000528584.5_1_15:28900509-28916776:+|nuORF;ENST00000529624.5_3_15:28877823-28916776:+|nuORF;ENST00000530420.5_1_15:28900570-28916776:+|nuORF	16.473147378115264	0.6112419832031293	4				NaN	NaN	0	NaN	507	2158	2660
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2680	12.185	NaN	12767	30	0	3049.4	0.214	+			15274	GTTPPVKKK	9	65	478.3003779587423	954.5862029842846	2	478.30010986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTTPPVKKK_	ENSG00000169375|ENST00000394947|SIN3A;SIN3A|p.G659Afs*26|1|0.14|ENSG00000169375|chr15:75396375-75396375|C/-|frameshift_variant	79.71258880314673	0.09879134589249085	4				NaN	NaN	0	NaN	517	2161	2679
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2681	12.189	NaN	11021	30	0	3147	0.106			+	-1	FLGKARCK	8	51	490.2794892164369	978.5444254996738	2	490.2792663574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_FLGKARC(Carbamidomethyl (C))K_	REV__ENSG00000166444|ENST00000313726|DENND2B;REV__ENST00000532162.5_1_11:8715645-8720554:-|nuORF;REV__nc|ENSG00000166444|P78524-2|DENND2B;REV__nc|ENSG00000166444|P78524-3|DENND2B	26.79610172149135	0.7524337208463756	4				NaN	NaN	0	NaN	518	2161	2679
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2682	12.191	NaN	19449	30	0	4691.5	0.106			+	7347	DCHSDPLLI	9	39	506.74198218705004	1011.4694114409001	2	507.748291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DCHSDPLLI_	REV__NLRP5|p.E577D|1|0.07|ENSG00000171487|chr19:56027964-56027964|G/T|missense_variant	13.775330524044264	0.6112419832031292	4				NaN	NaN	0	NaN	519	2161	2679
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2683	12.193	NaN	7667.1	30	0	1150.2	0.106	+			43389	TGGGAEVSPQT	11	57	502.23777716183787	1002.4610013904758	2	503.7799377441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TGGGAEVSPQT_	ENSG00000212916|ENST00000418460|MAP10;MAP10|p.L687Rfs*15|1|0.08|ENSG00000212916|chr1:232807082-232807083|-/G|frameshift_variant;MAP10|p.R484Sfs*3|1|0.24|ENSG00000212916|chr1:232806464-232806465|-/AA|frameshift_variant	30.317721548370564	0.6717830234747728	4				NaN	NaN	0	NaN	520	2161	2679
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2684	12.195	NaN	10629	30	0	2381.1	0.106			+	-1	RSAAEMVHE	9	54	523.2405595377176	1044.466566142235	2	523.239990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_RSAAEM(Oxidation (M))VHE_	REV__ENSG00000166398|ENST00000299505|GARRE1	35.61828744233558	0.47037581924408073	4				NaN	NaN	0	NaN	521	2161	2679
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2685	12.197	NaN	4590.2	30	0	815.56	0.106	+			5169	ATTEVQRK	8	62	466.76119413532285	NaN	0	466.7611999511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATTEVQRK_	ENSG00000176771|ENST00000409261|NCKAP5	50.0245360154114	1.7418937515398478	4				NaN	NaN	0	NaN	522	2161	2679
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2686	12.198	NaN	12723	30	0	2411.9	0.037				-1	ATQHICHQK	9	59	561.7766303646581	1121.5387077961161	2	561.7412719726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_ATQHIC(Carbamidomethyl (C))HQK_	ENSG00000107771|ENST00000372088|CCSER2;ENST00000498300.5_1_10:86198319-86273265:+|nuORF;nc|ENSG00000107771|Q9H7U1-4|CCSER2;nc|ENSG00000107771|Q9H7U1|CCSER2	52.936696900407355	0.27249468807391813	4				NaN	NaN	0	NaN	523	2161	2679
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2703	12.232	NaN	34147	30	0	10295	0.198			+	-1	EPGEFMVK	8	50	476.7248601165256	NaN	0	476.7248840332031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_EPGEFM(Oxidation (M))VK_	REV__tr|U7T242|U7T242_FUSNUMalonylCoA-acylcarrierproteintransacylaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00462PE=3SV=1	45.9519527083369	1.7418937515398478	4				NaN	NaN	0	NaN	537	2164	2702
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2704	12.235	NaN	20266	30	0	4767	0.106			+	-1	QMCCQLDL	8	58	513.7067995859675	1025.3990462387349	2	513.7066040039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_QM(Oxidation (M))C(Carbamidomethyl (C))CQLDL_	REV__ENST00000290730.11_1_22:24179058-24180975:-|nuORF;REV__nc|ENSG00000099958|Q96Q80-4|DERL3	38.80614096846853	0.6637206697844082	4				NaN	NaN	0	NaN	538	2164	2702
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2705	12.237	NaN	8093.7	30	0	4945.1	0.106				-1	SWMNSCSF	8	26	517.6883228053134	1033.3620926774267	2	517.6881103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_SWM(Oxidation (M))NSC(Carbamidomethyl (C))SF_	ENST00000570080.1_1_16:23464085-23464412:+|nuORF	7.193352174278301	0.7795803817164585	4				NaN	NaN	0	NaN	539	2164	2702
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2706	12.239	NaN	9484.6	30	0	1721.7	0.106			+	9738	ENAVKQPEK	9	49	521.7801214467373	1041.5456899602746	2	521.7649536132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ENAVKQPEK_	REV__ENSG00000135525|ENST00000354570|MAP7;REV__nc|ENSG00000135525|Q14244-2|MAP7;REV__nc|ENSG00000135525|Q14244-3|MAP7;REV__nc|ENSG00000135525|Q14244-4|MAP7;REV__nc|ENSG00000135525|Q14244-5|MAP7;REV__nc|ENSG00000135525|Q14244-6|MAP7;REV__nc|ENSG00000135525|Q14244-7|MAP7	36.446750945000026	0.4619375763483977	4				NaN	NaN	0	NaN	540	2164	2702
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2707	12.241	NaN	42818	30	0	11742	0.106	+			3414	ASQKALKEK	9	83	501.8008727706962	1001.5871926081924	2	501.8005676269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASQKALKEK_	ENSG00000131143|ENST00000253452|COX4I1;ENST00000567266.5_1_16:85833348-85838718:+|nuORF;ENST00000569997.1_1_16:85838427-85838718:+|nuORF	173.39201167336012	0.002187917786942103	4				NaN	NaN	0	NaN	541	2164	2702
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2708	12.243	NaN	12919	30	0	6215.5	0.106			+	12029	FYFGPRGK	8	43	486.2591900862907	970.5038272393814	2	486.2585144042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FYFGPRGK_	REV__ENSG00000196689|ENST00000572705|TRPV1;REV__ENST00000572919.1_3_17:3488830-3495572:-|nuORF;REV__ENST00000574085.5_1_17:3470111-3495610:-|nuORF;REV__nc|ENSG00000196689|Q8NER1-3|TRPV1	35.200714571348534	0.6875396545722289	4				NaN	NaN	0	NaN	542	2164	2702
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2709	12.245	NaN	5232.4	30	0	808.13	0.035			+	-1	SCPGPCLVW	9	61	509.72886213990796	NaN	0	509.7855529785156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_SCPGPC(Carbamidomethyl (C))LVW_	REV__PLK3|p.L455Wfs*90|1|0.24|ENSG00000173846|chr1:44804354-44804354|C/-|frameshift_variant	42.47446043378293	0.25855550551448697	4				NaN	NaN	0	NaN	543	2164	2702
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2720	12.27	NaN	13447	30	0	1693.2	0.214	+			40338	STTETKEPK	9	76	510.7640933292824	1019.5136337253648	2	510.7640380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STTETKEPK_	ENSG00000162896|ENST00000356495|PIGR	176.44474024533739	0.0016668318535579616	4				NaN	NaN	0	NaN	551	2167	2719
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2721	12.273	NaN	14020	30	0	2847.6	0.106			+	36723	SGVESPAETPA	11	58	522.7434638494158	NaN	0	522.7435302734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SGVESPAETPA_	REV__ENSG00000182087|ENST00000356663|TMEM259;REV__ENST00000592618.5_1_19:1010351-1011343:-|nuORF	32.81241826257853	0.4191849651971536	4				NaN	NaN	0	NaN	552	2167	2719
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2722	12.275	NaN	7264.3	30	0	2629.3	0.106			+	-1	MQIMNEAGQ	9	39	527.2219848632812	NaN	0	527.2219848632812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Oxidation (M)	_M(Oxidation (M))QIM(Oxidation (M))NEAGQ_	REV__ENSG00000065243|ENST00000370521|PKN2;REV__nc|ENSG00000065243|Q16513-2|PKN2;REV__nc|ENSG00000065243|Q16513-3|PKN2	30.503639358989545	0.3235605894931338	4				NaN	NaN	0	NaN	553	2167	2719
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2723	12.277	NaN	8326.5	30	0	1487.5	0.106	+			6746	CDAYDFEKQ	9	37	559.7247433491741	1117.4349337651481	2	559.7249145507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_CDAYDFEKQ_	ENSG00000134588|ENST00000511190|USP26	20.94693142431847	0.6074874384046576	4				NaN	NaN	0	NaN	554	2167	2719
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2724	12.279	NaN	8252.9	30	0	1780.7	0.106			+	-1	CFPFTPNSD	9	44	542.7235147473883	NaN	0	542.72216796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_C(Carbamidomethyl (C))FPFTPNSD_	REV__THE1B-int_dup1996|chr7:8345870-8347393:+|1.2346957743909006|0.2358979979729452|2.39|457.0|55|1|anti-sense	16.473147378115264	0.38122769658151995	4				NaN	NaN	0	NaN	555	2167	2719
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2725	12.281	NaN	4931	30	0	951.65	0.106			+	-1	HQTRMKPI	8	45	513.7803086905316	NaN	0	513.7802124023438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_HQTRM(Oxidation (M))KPI_	REV__ENST00000500148.6_1_5:80535063-80546553:-|nuORF	19.359975847455235	1.7418937515398478	4				NaN	NaN	0	NaN	556	2167	2719
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2726	12.283	NaN	8531.8	30	0	5188.5	0.034			+	1988	AKDTFFCQ	8	46	480.2175535621411	958.4205541910823	2	480.21759033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AKDTFFCQ_	REV__ENSG00000154237|ENST00000388948|LRRK1;REV__ENST00000525284.5_1_15:101565016-101602660:+|nuORF;REV__ENST00000531270.5_1_15:101565016-101589971:+|nuORF	42.396135135203025	0.6414440140393314	4				NaN	NaN	0	NaN	557	2167	2719
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2737	12.308	NaN	23128	30	0	5012.6	0.214	+			44910	TVAETSKEK	9	75	496.7667157112401	991.5188784892803	2	496.76629638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVAETSKEK_	ENSG00000160294|ENST00000291688|MCM3AP	123.20810148215591	0.019257656778428764	4				NaN	NaN	0	NaN	565	2170	2736
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2738	12.312	NaN	12822	30	0	2842.3	0.106			+	32187	QSTAQFVAML	10	71	556.2748076546268	1110.5350623760535	2	556.2747192382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_QSTAQFVAM(Oxidation (M))L_	REV__ENSG00000131018|ENST00000367255|SYNE1;REV__ENST00000490135.6_1_6:152637953-152655276:-|nuORF;REV__nc|ENSG00000131018|Q8NF91-4|SYNE1;REV__nc|ENSG00000131018|Q8NF91-7|SYNE1;REV__SYNE1|p.E4738Kfs*25|1|0.12|ENSG00000131018|chr6:152330474-152330474|T/-|frameshift_variant;REV__SYNE1|p.E5862Gfs*83|1|0.12|ENSG00000131018|chr6:152300729-152300738|CCAGACTCCT/-|frameshift_variant;REV__SYNE1|p.G6773Wfs*7|1|0.44|ENSG00000131018|chr6:152236186-152236187|-/A|frameshift_variant;REV__SYNE1|p.K6871Rfs*22|2|0.52|ENSG00000131018|chr6:152233881-152233881|T/-|frameshift_variant;REV__SYNE1|p.L8283Pfs*8|1|0.19|ENSG00000131018|chr6:152148173-152148174|-/G|frameshift_variant;REV__SYNE1|p.M5602Nfs*13|2|0.32|ENSG00000131018|chr6:152310779-152310780|-/T|frameshift_variant;REV__SYNE1|p.V8635Sfs*12|1|0.15|ENSG00000131018|chr6:152133375-152133375|T/-|frameshift_variant	52.936696900407355	0.4300801048568001	4				NaN	NaN	0	NaN	566	2170	2736
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2739	12.314	NaN	13171	30	0	2541.2	0.106			+	45513	TYGQHKFW	8	43	533.7591325545842	1065.5037121759683	2	533.7594604492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TYGQHKFW_	REV__ENSG00000109775|ENST00000264689|UFSP2	18.324413293986947	0.7971860551947066	4				NaN	NaN	0	NaN	567	2170	2736
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2740	12.316	NaN	5091.4	30	0	2092.3	0.106				-1	 	0	39	348.18889404742305	1041.5448527424692	3	348.1890563964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	568	2170	2736
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2741	12.318	NaN	6386.8	30	0	599.01	0.106	+			59	AAAQVAHQK	9	68	462.2566045752913	922.4986562173826	2	462.25634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AAAQVAHQK_	ENSG00000112977|ENST00000230895|DAP	129.68262048586715	0.015338143639892752	4				NaN	NaN	0	NaN	569	2170	2736
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2742	12.319	NaN	11640	30	0	1557.6	0.106				-1	EGAADGCVPSQ	11	47	545.7268611566359	NaN	0	545.7274780273438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_EGAADGC(Carbamidomethyl (C))VPSQ_	ENSG00000063438|ENST00000684583|AHRR;nc|ENSG00000063438|A9YTQ3-2|AHRR;nc|ENSG00000063438|A9YTQ3-3|AHRR;nc|ENSG00000063438|A9YTQ3|AHRR	36.446750945000026	0.40298828388271424	4				NaN	NaN	0	NaN	570	2170	2736
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2743	12.321	NaN	3627.6	30	0	1312.5	0.035				-1	 	0	48	500.7359169766963	999.4572810201926	2	500.73565673828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	571	2170	2736
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2755	12.347	NaN	17671	30	0	1691.5	0.214	+			38153	SQANVSRAK	9	80	480.764564480997	959.5145760287941	2	480.7643127441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SQANVSRAK_	ENSG00000196531|ENST00000454682|NACA;ENSG00000253506|ENST00000521764|NACA2;nc|ENSG00000196531|E9PAV3-2|NACA;nc|ENSG00000196531|Q13765|NACA	140.11223852658463	0.010427410095706195	4				NaN	NaN	0	NaN	580	2173	2754
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2756	12.351	NaN	15182	30	0	7560.9	0.106	+			14142	GSMRCQKK	8	60	505.7461134500194	1009.4776739668388	2	505.7455749511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_GSM(Oxidation (M))RC(Carbamidomethyl (C))QKK_	ENSG00000135253|ENST00000610776|KCP;KCP|p.D914Tfs*111|1|0.3|ENSG00000135253|chr7:128885218-128885218|G/-|frameshift_variant;KCP|p.E906Kfs*119|1|0.14|ENSG00000135253|chr7:128885242-128885242|G/-|frameshift_variant;KCP|p.Q841Ifs*185|1|0.15|ENSG00000135253|chr7:128886727-128886728|-/TC|frameshift_variant;KCP|p.S1006Afs*19|1|0.32|ENSG00000135253|chr7:128884051-128884051|G/-|frameshift_variant;nc|ENSG00000135253|Q6ZWJ8|KCP	55.50420428727701	0.5462892107279674	4				NaN	NaN	0	NaN	581	2173	2754
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2757	12.353	NaN	6490.5	30	0	2690.4	0.106	+			30055	PPYLANFY	8	52	492.74359130859375	NaN	0	492.74359130859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PPYLANFY_	nc|nan|Q6UX73|C16orf89	28.2542754592877	1.7418937515398478	4				NaN	NaN	0	NaN	582	2173	2754
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2758	12.355	NaN	3646.7	30	0	424.67	0.106			+	7838	DQHASLLIQ	9	52	342.185341757474	1023.5341958726221	3	342.1854553222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DQHASLLIQ_	REV__ENST00000503766.5_1_6:43191760-43192180:+|nuORF	42.86426827375447	0.38666266728046506	4				NaN	NaN	0	NaN	583	2173	2754
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2759	12.356	NaN	10930	30	0	1653.6	0.106	+			16576	HFVDMHSSF	9	51	553.7390050630511	1105.463457192902	2	553.7373657226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HFVDMHSSF_	ENST00000369842.8_1_X:153609573-153609861:+|nuORF	31.954861631926434	0.5046124803899898	4				NaN	NaN	0	NaN	584	2173	2754
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2760	12.358	NaN	12065	30	0	2312.2	0.106			+	-1	WPCMWCPEP	9	45	582.7194907540454	1163.4244285748907	2	582.719482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_WPCM(Oxidation (M))WCPEP_	REV__ENST00000487106.5_1_1:156024929-156025058:+|nuORF	20.481830146152948	0.6112419832031293	4				NaN	NaN	0	NaN	585	2173	2754
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2761	12.36	NaN	6313.1	30	0	1317.2	0.034			+	-1	FKGRCKAS	8	43	477.25378751553575	952.4930220978715	2	477.2534484863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_FKGRC(Carbamidomethyl (C))KAS_	REV__ENST00000462012.1_1_1:204507254-204507413:+|nuORF	33.51558372728122	0.7005509609380386	4				NaN	NaN	0	NaN	586	2173	2754
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2776	12.392	NaN	13021	30	0	2148.8	0.214			+	19463	KASCELFEVK	10	63	577.3016459433453	NaN	0	577.3015747070312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KASCELFEVK_	REV__ENSG00000144867|ENST00000678299|SRPRB	55.08391021199286	0.27346126051334796	4				NaN	NaN	0	NaN	598	2176	2775
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2777	12.395	NaN	14293	30	0	4586.1	0.106	+			38312	SRCWHGCGDQ	10	46	574.7224453984838	1147.4303378637676	2	574.72216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SRCWHGCGDQ_	L1PB1_dup5905|chr7:93807211-93809400:+|2.023350116566841|0.2056128638309657|3.3|382.0|45|2|sense	22.579656572578934	0.6954366826851017	4				NaN	NaN	0	NaN	599	2176	2775
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2778	12.397	NaN	12598	30	0	2537.6	0.106			+	-1	RSPADMSCR	9	38	548.2363832598737	1094.4582135865473	2	548.2365112304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_RSPADM(Oxidation (M))SC(Carbamidomethyl (C))R_	REV__U2SURP|p.R243C|1|0.19|ENSG00000163714|chr3:143020687-143020687|C/T|missense_variant	15.641811463095205	0.6112419832031292	4				NaN	NaN	0	NaN	600	2176	2775
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2779	12.399	NaN	14316	30	0	2550.6	0.106				-1	KMRRQRMR	8	43	589.3296042526233	NaN	0	589.2810668945312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_KMRRQRM(Oxidation (M))R_	ATAD2|p.P460Qfs*32|1|0.42|ENSG00000156802|chr8:123359224-123359224|G/-|frameshift_variant;ENSG00000156802|ENST00000287394|ATAD2;ENST00000517666.5_1_8:124333376-124408650:-|nuORF;ENST00000519124.5_1_8:124382257-124392860:-|nuORF;ENST00000521496.5_1_8:124357024-124408597:-|nuORF;ENST00000521903.5_1_8:124361561-124413087:-|nuORF;nc|ENSG00000156802|Q6PL18-2|ATAD2	12.959181472943097	1.7418937515398478	4				NaN	NaN	0	NaN	601	2176	2775
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2780	12.401	NaN	14638	30	0	3003.4	0.106				-1	GGGGKGMHIAW	11	39	543.7620634433656	NaN	0	543.7620239257812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_GGGGKGM(Oxidation (M))HIAW_	PCCA|p.R230H|1|0.16|ENSG00000175198|chr13:100257646-100257646|G/A|missense_variant	19.996771675451527	0.456735970842152	4				NaN	NaN	0	NaN	602	2176	2775
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2781	12.403	NaN	9601.8	30	0	2131.3	0.036			+	23141	KVWEDFQE	8	64	540.7535869905697	1079.4926210479393	2	540.7537231445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KVWEDFQE_	REV__ENSG00000091483|ENST00000366560|FH;REV__nc|ENSG00000091483|P07954-2|FH	45.9519527083369	0.6193794311207887	4				NaN	NaN	0	NaN	603	2176	2775
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2782	12.403	NaN	3297.3	30	0	415.07	0.139			+	50323	WTLMAWPA	8	62	488.2409071789489	974.4672614246978	2	488.7530212402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_WTLMAWPA_	REV__AIP|p.L115Wfs*41|1|0.41|ENSG00000110711|chr11:67489326-67489326|C/-|frameshift_variant	35.200714571348534	0.6875396545722289	4				NaN	NaN	0	NaN	604	2176	2775
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2796	12.433	NaN	98206	30	0	19355	0.182	+			34979	SAAPPQEKK	9	90	478.26404289925887	954.5135328653178	2	478.2638244628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAAPPQEKK_	CAST|p.E474Kfs*10|1|0.39|ENSG00000153113|chr5:96754695-96754695|A/-|frameshift_variant;ENSG00000153113|ENST00000675179|CAST;ENST00000513666.5_1_5:96073558-96090478:+|nuORF;nc|ENSG00000153113|P20810-10|CAST;nc|ENSG00000153113|P20810-2|CAST;nc|ENSG00000153113|P20810-3|CAST;nc|ENSG00000153113|P20810-4|CAST;nc|ENSG00000153113|P20810-5|CAST;nc|ENSG00000153113|P20810-7|CAST;nc|ENSG00000153113|P20810-8|CAST;nc|ENSG00000153113|P20810-9|CAST;nc|ENSG00000153113|P20810|CAST	123.20810148215591	0.019257656778428764	4				NaN	NaN	0	NaN	615	2179	2795
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2797	12.436	NaN	19007	30	0	9176.4	0.106				-1	CSRTCPKK	8	64	490.243407288464	978.4722616437281	2	490.242919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_C(Carbamidomethyl (C))SRTCPKK_	nc|ENSG00000243156|Q7RTP6-5|MICAL3	60.97194046774394	0.49215940876911696	4				NaN	NaN	0	NaN	616	2179	2795
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2798	12.438	NaN	10522	30	0	2053.9	0.106			+	40199	STSASNTQPGE	11	62	539.7341714887348	NaN	0	539.8092651367188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STSASNTQPGE_	REV__AKAP6|p.E1418Kfs*19|1|0.26|ENSG00000151320|chr14:32822061-32822061|G/-|frameshift_variant;REV__AKAP6|p.N1585Mfs*12|1|0.25|ENSG00000151320|chr14:32822563-32822563|A/-|frameshift_variant;REV__ENSG00000151320|ENST00000280979|AKAP6;REV__nc|ENSG00000151320|Q13023-2|AKAP6	56.43379154798735	0.26710304324494344	4				NaN	NaN	0	NaN	617	2179	2795
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2799	12.44	NaN	9719.5	30	0	1801.6	0.106			+	50602	YDPNMMYQ	8	28	531.2065100630969	1060.3984671929936	2	531.2067260742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YDPNMMYQ_	REV__tr|U7SIU9|U7SIU9_FUSNUarginaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02241PE=3SV=1	21.9598887501803	0.7897753010812679	4				NaN	NaN	0	NaN	618	2179	2795
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2800	12.442	NaN	16628	30	0	5008.2	0.106	+			40118	STPKSSNPPK	10	66	521.7801214467373	1041.5456899602746	2	521.7802124023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STPKSSNPPK_	ENSG00000118322|ENST00000327245|ATP10B	50.033510581677724	0.4566913063131936	4				NaN	NaN	0	NaN	619	2179	2795
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2801	12.444	NaN	7372.3	30	0	2157.8	0.106			+	32795	RATGEDMPQ	9	58	510.7250419153236	NaN	0	510.72503662109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_RATGEDM(Oxidation (M))PQ_	REV__tr|U7SYX7|U7SYX7_FUSNUD-alanyl-D-alaninecarboxypeptidase(Penicillin-bindingprotein5/6)OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00797PE=3SV=1	44.377184641726394	0.24544280798894275	4				NaN	NaN	0	NaN	620	2179	2795
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2802	12.445	NaN	8214.9	30	0	1632.2	0.035			+	-1	QVSSMPPDQ	9	63	502.72245073409493	1003.4303485349899	2	502.72222900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_QVSSM(Oxidation (M))PPDQ_	REV__E4F1|p.E388Gfs*55|1|0.48|ENSG00000167967|chr16:2233539-2233540|-/G|frameshift_variant	39.252832667884924	0.4290233611298554	4				NaN	NaN	0	NaN	621	2179	2795
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2817	12.476	NaN	40586	30	0	14704	0.214	+			22013	KSGFDEETQ	9	65	520.729834759241	1039.445116585282	2	520.7298583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSGFDEETQ_	ENSG00000185792|ENST00000332836|NLRP9	44.377184641726394	0.36891676396732553	4				NaN	NaN	0	NaN	633	2182	2816
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2818	12.48	NaN	5503.3	30	0	739.29	0.106	+			41893	SVTSSTHEK	9	59	488.2409071789489	974.4672614246978	2	488.240478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVTSSTHEK_	ENSG00000013503|ENST00000228347|POLR3B;nc|ENSG00000013503|Q9NW08-2|POLR3B;POLR3B|p.K691Nfs*7|1|0.25|ENSG00000013503|chr12:106444574-106444574|G/-|frameshift_variant;POLR3B|p.M1020Nfs*18|1|0.13|ENSG00000013503|chr12:106501392-106501393|-/A|frameshift_variant;POLR3B|p.T279Hfs*46|1|0.25|ENSG00000013503|chr12:106393136-106393137|-/T|frameshift_variant;POLR3B|p.V869Sfs*8|1|0.27|ENSG00000013503|chr12:106463506-106463507|-/A|frameshift_variant	90.36981228632155	0.0638227155548745	4				NaN	NaN	0	NaN	634	2182	2816
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2819	12.482	NaN	29832	30	0	5537.5	0.106			+	27480	MLVEPNSHGPQ	11	60	604.7906330413689	1207.5667131495377	2	604.7908325195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MLVEPNSHGPQ_	REV__ENSG00000156650|ENST00000287239|KAT6B;REV__nc|ENSG00000156650|Q8WYB5-2|KAT6B;REV__nc|ENSG00000156650|Q8WYB5-3|KAT6B	25.57405402267927	0.7215402271931856	4				NaN	NaN	0	NaN	635	2182	2816
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2820	12.484	NaN	7240.9	30	0	3168.4	0.106	+			39025	SSSKEGRTQ	9	58	490.243407288464	978.4722616437281	2	490.77203369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSSKEGRTQ_	nc|ENSG00000111653|Q9UNL4-5|ING4	44.377184641726394	0.36891676396732553	4				NaN	NaN	0	NaN	636	2182	2816
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2821	12.486	NaN	11423	30	0	2120.5	0.106			+	-1	QGDDEEACAC	10	39	577.6891419671343	1153.3637310010686	2	577.6882934570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C)	_QGDDEEAC(Carbamidomethyl (C))AC(Carbamidomethyl (C))_	REV__DSG3|p.F798C|1|0.12|ENSG00000134757|chr18:31475653-31475653|T/G|missense_variant	8.693696342081763	0.772272096586433	4				NaN	NaN	0	NaN	637	2182	2816
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2822	12.488	NaN	9243.3	30	0	3076.5	0.034	+			5181	ATTKPPPAK	9	74	455.7715428203551	909.5285327075102	2	455.77130126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATTKPPPAK_	ENSG00000166197|ENST00000605788|NOLC1;nc|ENSG00000166197|Q14978-2|NOLC1;nc|ENSG00000166197|Q14978-3|NOLC1	72.87924865735499	0.12833875048249987	4				NaN	NaN	0	NaN	638	2182	2816
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2823	12.488	NaN	14329	30	0	1860.4	0.144				-1	GYQKMWFCF	9	36	641.7719368904199	1281.5293208476396	2	641.7717895507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C),Oxidation (M)	_GYQKM(Oxidation (M))WFC(Carbamidomethyl (C))F_	ENST00000354105.8_1_10:102013195-102016046:-|nuORF;ENST00000482452.5_1_10:102013195-102027350:-|nuORF	12.959181472943097	0.6112419832031292	4				NaN	NaN	0	NaN	639	2182	2816
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2835	12.515	NaN	10388	30	0	1284.4	0.214				-1	VHLFLREC	8	61	537.2809005110887	1072.5472480889773	2	537.2810668945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_VHLFLREC(Carbamidomethyl (C))_	ENST00000505846.5_1_4:83369114-83376003:+|nuORF	25.450171626174864	0.7628259754767981	4				NaN	NaN	0	NaN	648	2185	2834
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2836	12.518	NaN	11025	30	0	3761.5	0.106				-1	NTQSQGKTSAC	11	27	591.265155343223	1180.515757753246	2	591.26513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_NTQSQGKTSAC(Carbamidomethyl (C))_	AKAP13|p.T1197Hfs*9|1|0.33|ENSG00000170776|chr15:85581652-85581653|-/C|frameshift_variant;AKAP13|p.T2400Nfs*3|1|0.33|ENSG00000170776|chr15:85730617-85730618|-/C|frameshift_variant;ENSG00000170776|ENST00000394518|AKAP13;nc|ENSG00000170776|Q12802-2|AKAP13;nc|ENSG00000170776|Q12802-4|AKAP13	11.635926663890343	0.8160050785733157	4				NaN	NaN	0	NaN	649	2185	2834
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2837	12.52	NaN	6078.4	30	0	1058	0.106	+			38942	SSQPWSAPW	9	61	523.2405595377176	1044.466566142235	2	523.8013305664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSQPWSAPW_	ENST00000485978.1_1_9:136343401-136343470:-|nuORF	37.15910966729921	0.4535818937225704	4				NaN	NaN	0	NaN	650	2185	2834
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2838	12.522	NaN	4920	30	0	1602.5	0.106			+	33398	RICKGWAT	8	25	467.75063516064614	933.4867173880923	2	467.7502136230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RICKGWAT_	REV__ANO6|p.V892*|1|0.32|ENSG00000177119|chr12:45429248-45429248|G/-|frameshift_variant;REV__ENSG00000177119|ENST00000320560|ANO6;REV__nc|ENSG00000177119|Q4KMQ2-2|ANO6;REV__nc|ENSG00000177119|Q4KMQ2-3|ANO6;REV__nc|ENSG00000177119|Q4KMQ2-4|ANO6	12.959181472943097	0.7887000251064199	4				NaN	NaN	0	NaN	651	2185	2834
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2839	12.524	NaN	9275.8	30	0	1637.3	0.106	+			13822	GQQKIQSQQK	10	70	586.8229274217219	1171.6313019102438	2	586.8226928710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GQQKIQSQQK_	ENSG00000120963|ENST00000311212|ZNF706;ENST00000519916.1_1_8:102213783-102213969:-|nuORF	125.71293069911285	0.01926106323661889	4				NaN	NaN	0	NaN	652	2185	2834
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2840	12.526	NaN	2932.7	30	0	585.43	0.106			+	27165	MDCPCNCDD	9	51	339.092665806313	NaN	0	338.88543701171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MDCPCNCDD_	REV__ENSG00000135272|ENST00000393486|MDFIC;REV__ENST00000431629.5_2_7:114654517-114655986:+|nuORF;REV__MDFIC|p.D219V|1|0.11|ENSG00000135272|chr7:115015850-115015850|A/T|missense_variant;REV__nc|ENSG00000135272|Q9P1T7-1|MDFIC	17.468008924990375	0.37786057458515737	4				NaN	NaN	0	NaN	653	2185	2834
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2841	12.527	NaN	9425.7	30	0	2156	0.037				-1	TWAEVTVCSC	10	39	578.2441682231292	1154.4737835130584	2	578.2434692382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_TWAEVTVC(Carbamidomethyl (C))SC_	ENSG00000134900|ENST00000376052|TPP2;nc|ENSG00000134900|P29144|TPP2;TPP2|p.F722Lfs*12|1|0.06|ENSG00000134900|chr13:102643366-102643367|-/AAACTTA|frameshift_variant	21.9598887501803	0.7004979571547932	4				NaN	NaN	0	NaN	654	2185	2834
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2853	12.553	NaN	4779.7	30	0	969.2	0.214	+			20061	KEKENKKE	8	59	516.7881929091405	1031.561832885081	2	516.7879028320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEKENKKE_	ENST00000508756.2_1_5:98204705-98207835:-|nuORF	71.29570347882199	0.39610197767395533	4				NaN	NaN	0	NaN	663	2188	2852
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2854	12.556	NaN	6112	30	0	1084.2	0.106				-1	GYCCLECGDA	10	37	574.1963037198431	NaN	0	574.2636108398438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_GYC(Carbamidomethyl (C))CLEC(Carbamidomethyl (C))GDA_	ENSG00000166716|ENST00000560079|ZNF592	11.511019455917149	0.4201028297492154	4				NaN	NaN	0	NaN	664	2188	2852
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2855	12.558	NaN	6264.8	30	0	1130.1	0.106			+	7536	DGTARCVPCV	10	70	510.7337198241817	NaN	0	510.73345947265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DGTARCVPCV_	REV__NANOS2|p.G102R|1|0.19|ENSG00000188425|chr19:45914390-45914390|C/T|missense_variant	45.97224482568171	0.33106653400957564	4				NaN	NaN	0	NaN	665	2188	2852
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2856	12.56	NaN	4889.2	30	0	1027.7	0.106	+			44311	TSEVTYIW	8	51	499.745895537835	997.47723814247	2	499.2923583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TSEVTYIW_	ENSG00000151834|ENST00000381620|GABRA2;nc|ENSG00000151834|P47869-2|GABRA2	33.51558372728122	0.7005509609380386	4				NaN	NaN	0	NaN	666	2188	2852
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2857	12.562	NaN	5653.2	30	0	1075.4	0.106	+			12048	FYTHDICIC	9	48	557.7403171255487	NaN	0	557.7410888671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FYTHDICIC_	CABIN1|p.M1079T|1|0.11|ENSG00000099991|chr22:24085124-24085124|T/C|missense_variant	31.954861631926434	0.3162336699109506	4				NaN	NaN	0	NaN	667	2188	2852
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2858	12.564	NaN	4313.5	30	0	983.04	0.106				-1	CEMLDHFD	8	36	541.6985646867574	1081.3825764403148	2	541.6982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),Oxidation (M)	_C(Carbamidomethyl (C))EM(Oxidation (M))LDHFD_	ENSG00000157423|ENST00000393567|HYDIN;HYDIN|p.E2653Kfs*4|1|0.27|ENSG00000157423|chr16:70918259-70918259|T/-|frameshift_variant;HYDIN|p.F4256Vfs*111|1|0.27|ENSG00000157423|chr16:70849833-70849834|-/C|frameshift_variant;HYDIN|p.I1986Nfs*6|1|0.45|ENSG00000157423|chr16:70961970-70961971|-/T|frameshift_variant;HYDIN|p.R1703Lfs*51|1|0.5|ENSG00000157423|chr16:70973950-70973951|-/GA|frameshift_variant;HYDIN|p.V3416Gfs*64|1|0.15|ENSG00000157423|chr16:70879725-70879726|-/ACTCC|frameshift_variant	12.959181472943097	0.7887000251064199	4				NaN	NaN	0	NaN	668	2188	2852
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2859	12.566	NaN	4903	30	0	940.73	0.036	+			32829	RCHKDVPPAA	10	39	547.2843017578125	NaN	0	547.2843017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RCHKDVPPAA_	ENSG00000261221|ENST00000568956|ZNF865	26.69291269510374	0.4125295221340092	4				NaN	NaN	0	NaN	669	2188	2852
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2873	12.595	NaN	30385	30	0	4186.3	0.214	+			5657	AVDNNSKVK	9	73	487.76711980200474	973.5196866708095	2	487.7666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVDNNSKVK_	ENSG00000005194|ENST00000394391|CIAPIN1;ENST00000566284.1_1_16:57467902-57474840:-|nuORF;ENST00000584883.1_1_18:24179506-24179722:+|nuORF;nc|ENSG00000005194|Q6FI81-3|CIAPIN1	136.98908636845044	0.011892605960677736	4				NaN	NaN	0	NaN	680	2191	2872
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2874	12.598	NaN	32439	30	0	3171.7	0.106	+			41611	SVQKGVNSQK	10	79	537.7989615348132	1073.5833701364263	2	537.799072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVQKGVNSQK_	ENSG00000138375|ENST00000357276|SMARCAL1	154.0112374973812	0.007783311651969589	4				NaN	NaN	0	NaN	681	2191	2872
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2875	12.6	NaN	16124	30	0	2857.6	0.106	+			27510	MNESHPRK	8	61	499.745895537835	997.47723814247	2	499.7456970214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MNESHPRK_	ENSG00000007952|ENST00000372966|NOX1;nc|ENSG00000007952|Q9Y5S8-3|NOX1	87.69643885390035	0.28444366722805053	4				NaN	NaN	0	NaN	682	2191	2872
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2876	12.602	NaN	10637	30	0	2081.9	0.106	+			4022	ATDASSNRVK	10	70	524.7728668452557	1047.5311807573114	2	524.77294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATDASSNRVK_	ENST00000291547.9_1_21:44394763-44427647:+|nuORF	88.17693792209575	0.14151128060301246	4				NaN	NaN	0	NaN	683	2191	2872
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2877	12.604	NaN	16587	30	0	5238.8	0.106	+			3419	ASQKNFKAK	9	75	511.29314798091957	1020.5717430286392	2	511.29266357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASQKNFKAK_	ENSG00000176731|ENST00000619594|RBIS;ENST00000523245.1_1_8:86129602-86132627:-|nuORF;nc|ENSG00000176731|Q8N0T1-2|RBIS	115.49404669440601	0.023927554121326553	4				NaN	NaN	0	NaN	684	2191	2872
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2878	12.606	NaN	4034.2	30	0	1239.1	0.034	+			15178	GTSGPHVGKK	10	56	484.2696330631159	966.5247131930319	2	484.26947021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTSGPHVGKK_	ENSG00000111859|ENST00000379446|NEDD9;ENST00000448183.6_1_6:11200558-11306280:-|nuORF;nc|ENSG00000111859|Q14511-2|NEDD9;nc|ENSG00000111859|Q14511-3|NEDD9;NEDD9|p.P245Lfs*3|2|0.37|ENSG00000111859|chr6:11191135-11191135|G/-|frameshift_variant	77.31757898189308	0.2175361111083648	4				NaN	NaN	0	NaN	685	2191	2872
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2879	12.606	NaN	1617.9	30	0	582.81	0.143			+	48152	VSYLHPLPS	9	34	338.1881793255064	NaN	0	337.8537292480469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VSYLHPLPS_	REV__ENSG00000075539|ENST00000358350|FRYL;REV__FRYL|p.K2264Qfs*11|1|0.13|ENSG00000075539|chr4:48531269-48531270|-/G|frameshift_variant;REV__FRYL|p.P2464Efs*13|1|0.04|ENSG00000075539|chr4:48523032-48523033|-/TATACAATTC|frameshift_variant	23.04248740728303	0.3589936788096251	4				NaN	NaN	0	NaN	686	2191	2872
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2892	12.636	NaN	7615.9	30	0	1531.4	0.214	+			39609	STHLTQHQK	9	66	540.283891613282	NaN	0	540.283935546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STHLTQHQK_	ENSG00000096654|ENST00000683788|ZNF184	85.16082228582465	0.053699699744190164	4				NaN	NaN	0	NaN	696	2194	2891
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2893	12.639	NaN	5562.1	30	0	1994.3	0.106			+	43287	TFHYWEGN	8	30	527.223555925851	NaN	0	527.2238159179688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TFHYWEGN_	REV__ENSG00000138315|ENST00000334011|OIT3;REV__nc|ENSG00000138315|Q8WWZ8-2|OIT3	16.473147378115264	1.7418937515398478	4				NaN	NaN	0	NaN	697	2194	2891
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2894	12.641	NaN	7516.4	30	0	1319.4	0.106			+	24778	LIEQALARAQ	10	62	556.8254081796748	1111.6362634261495	2	556.8253173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LIEQALARAQ_	REV__ECHDC2|p.R223Q|1|0.16|ENSG00000121310|chr1:52904680-52904680|C/T|missense_variant	78.26377905018397	0.20980573808910843	4				NaN	NaN	0	NaN	698	2194	2891
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2895	12.643	NaN	6313.1	30	0	1267.3	0.106			+	-1	NVGMSPDYCE	10	51	565.7101440429688	NaN	0	565.7101440429688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_NVGM(Oxidation (M))SPDYCE_	REV__nc|ENSG00000165240|Q04656-3|ATP7A	15.641811463095205	0.4201028297492154	4				NaN	NaN	0	NaN	699	2194	2891
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2896	12.645	NaN	5070.7	30	0	1145.8	0.106			+	-1	VCPSCGSGCCQ	11	42	550.6858586977827	NaN	0	550.6849975585938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_VCPSCGSGC(Carbamidomethyl (C))CQ_	REV__ENSG00000215883|ENST00000534324|CYB5RL;REV__ENST00000490863.5_1_1:54653465-54661292:-|nuORF;REV__nc|ENSG00000256407|Q6IPT4-4|CYB5RL	16.006774744331256	0.456735970842152	4				NaN	NaN	0	NaN	700	2194	2891
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2897	12.647	NaN	6800.1	30	0	1227.1	0.106	+			12288	GCAMGPHCAEK	11	53	552.2256525335051	NaN	0	552.2628784179688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GCAMGPHCAEK_	ITGB1BP2|p.T60A|1|0.62|ENSG00000147166|chrX:71302417-71302417|A/G|missense_variant	29.170058357718403	0.43541742044178583	4				NaN	NaN	0	NaN	701	2194	2891
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2898	12.649	NaN	3030.7	30	0	877.49	0.034				-1	 	0	33	481.70830720940194	961.4020614856039	2	481.7178955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	702	2194	2891
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2911	12.676	NaN	43952	30	0	23710	0.214	+			3265	ASLMITTK	8	60	440.74503201055063	NaN	0	440.74505615234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ASLM(Oxidation (M))ITTK_	CHRD|p.F806Lfs*5|1|0.25|ENSG00000090539|chr3:184387435-184387436|-/C|frameshift_variant;ENSG00000090539|ENST00000204604|CHRD;ENST00000460627.5_1_3:184101080-184104037:+|nuORF;ENST00000464833.1_1_3:184102666-184104037:+|nuORF;ENST00000470150.5_1_3:184100608-184105741:+|nuORF;nc|ENSG00000090539|Q9H2X0-5|CHRD	60.97194046774394	1.7418937515398478	4				NaN	NaN	0	NaN	712	2197	2910
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2912	12.68	NaN	12733	30	0	4504.1	0.106				-1	FSGVMAGTASC	11	41	544.229013440354	NaN	0	544.2289428710938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_FSGVMAGTASC(Carbamidomethyl (C))_	ENSG00000099960|ENST00000382932|SLC7A4;SLC7A4|p.L431*|1|0.39|ENSG00000099960|chr22:21030043-21030043|G/-|frameshift_variant;SLC7A4|p.R363Pfs*92|1|0.2|ENSG00000099960|chr22:21030246-21030247|-/G|frameshift_variant	18.262085536374414	0.456735970842152	4				NaN	NaN	0	NaN	713	2197	2910
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2913	12.682	NaN	8940.6	30	0	2740.2	0.106				-1	 	0	51	486.2591900862907	970.5038272393814	2	486.25823974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	714	2197	2910
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2914	12.684	NaN	11458	30	0	4144.1	0.106				-1	FYCGMAVV	8	34	481.70830720940194	961.4020614856039	2	481.70794677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_FYC(Carbamidomethyl (C))GM(Oxidation (M))AVV_	ENSG00000160325|ENST00000316948|CACFD1;nc|ENSG00000160325|Q9UGQ2-4|CACFD1	16.704963439144045	0.7946246187734944	4				NaN	NaN	0	NaN	715	2197	2910
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2915	12.685	NaN	13167	30	0	2366.7	0.106				-1	NCTSCCLIPV	10	56	583.7537231445312	NaN	0	583.7537231445312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C)	_NCTSC(Carbamidomethyl (C))C(Carbamidomethyl (C))LIPV_	ENSG00000119977|ENST00000371217|TCTN3;nc|ENSG00000119977|Q6NUS6-3|TCTN3;nc|ENSG00000119977|Q6NUS6-5|TCTN3	30.503639358989545	0.4000169810673414	4				NaN	NaN	0	NaN	716	2197	2910
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2916	12.687	NaN	10993	30	0	3902.9	0.106			+	32327	QTTASCSVL	9	66	455.2221720662903	908.4297911993806	2	455.2217712402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QTTASCSVL_	REV__ENSG00000022556|ENST00000448584|NLRP2;REV__ENST00000381637.3_1_19:55501058-55501561:+|nuORF;REV__ENST00000540597.5_1_19:55476735-55501561:+|nuORF;REV__nc|ENSG00000022556|Q9NX02-2|NLRP2;REV__nc|ENSG00000022556|Q9NX02-3|NLRP2;REV__nc|ENSG00000022556|Q9NX02-4|NLRP2;REV__nc|ENSG00000022556|Q9NX02-5|NLRP2;REV__NLRP2|p.N1038Tfs*4|2|0.38|ENSG00000022556|chr19:55000816-55000816|A/-|frameshift_variant	34.172542307311794	0.4838870758800184	4				NaN	NaN	0	NaN	717	2197	2910
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2917	12.689	NaN	10891	30	0	2697.4	0.037				-1	MAGCEGCNCS	10	49	581.1723591908927	NaN	0	581.2100830078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	3 Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))AGC(Carbamidomethyl (C))EGC(Carbamidomethyl (C))NC(Carbamidomethyl (C))S_	ENSG00000053747|ENST00000313654|LAMA3;LAMA3|p.E2016Rfs*13|1|0.27|ENSG00000053747|chr18:23901164-23901164|G/-|frameshift_variant;LAMA3|p.T2580Hfs*68|1|0.55|ENSG00000053747|chr18:23915376-23915376|A/-|frameshift_variant;nc|ENSG00000053747|Q16787-3|LAMA3	19.996771675451527	0.4201028297492154	4				NaN	NaN	0	NaN	718	2197	2910
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2929	12.715	NaN	10379	30	0	3610.5	0.214			+	-1	WGRHRCNW	8	49	586.2697280748711	1170.524903216542	2	586.2696533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_WGRHRC(Carbamidomethyl (C))NW_	REV__ENSG00000177675|ENST00000313599|CD163L1;REV__nc|ENSG00000177675|Q9NR16-2|CD163L1;REV__nc|ENSG00000177675|Q9NR16-3|CD163L1;REV__nc|ENSG00000177675|Q9NR16-4|CD163L1	35.200714571348534	0.6875396545722289	4				NaN	NaN	0	NaN	727	2200	2928
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2930	12.719	NaN	9561.8	30	0	1975.3	0.106				-1	PWMGCWHANS	10	32	623.2503163018135	1244.486079670427	2	623.250244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_PWMGC(Carbamidomethyl (C))WHANS_	ENSG00000271447|ENST00000605424|MMP28	10.265252068803164	0.7642865340254049	4				NaN	NaN	0	NaN	728	2200	2928
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2931	12.721	NaN	8481	30	0	2016.2	0.106			+	-1	CADQSGWEWD	10	28	627.2322998046875	NaN	0	627.2322998046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_C(Carbamidomethyl (C))ADQSGWEWD_	REV__ENST00000467597.1_1_1:1560241-1560445:+|nuORF	9.705651100619752	0.4201028297492154	4				NaN	NaN	0	NaN	729	2200	2928
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2932	12.723	NaN	8508.7	30	0	1870.3	0.106	+			50059	WFFPIIGHM	9	49	574.2910049598296	1146.567456986459	2	574.291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_WFFPIIGHM_	ENSG00000186501|ENST00000374076|TMEM222	29.841539824830324	0.5243625958137083	4				NaN	NaN	0	NaN	730	2200	2928
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2933	12.724	NaN	725.77	30	0	127.85	0.106	+			36023	SEIGKKIFKK	10	36	393.2475280761719	NaN	0	393.2475280761719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SEIGKKIFKK_	tr|U7SJK5|U7SJK5_FUSNUDUF2229domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02087PE=4SV=1	31.634271133179894	0.39630454568332174	4				NaN	NaN	0	NaN	731	2200	2928
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2934	12.726	NaN	1402	30	0	299.64	0.106			+	7056	CTHTSFLL	8	33	461.22735595703125	NaN	0	461.22735595703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_CTHTSFLL_	REV__ENST00000382252.5_1_7:6694764-6695430:+|nuORF	20.481830146152948	1.741893751539848	4				NaN	NaN	0	NaN	732	2200	2928
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2935	12.728	NaN	3748.7	30	0	1165.6	0.036	+			37834	SNDANNGEHT	10	31	529.7105645001774	NaN	0	529.7022705078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SNDANNGEHT_	DENND4C|p.F1650Yfs*12|1|0.38|ENSG00000137145|chr9:19358095-19358096|TT/-|frameshift_variant;DENND4C|p.R1677Dfs*12|1|0.24|ENSG00000137145|chr9:19360255-19360255|A/-|frameshift_variant;ENSG00000137145|ENST00000434457|DENND4C;ENST00000380437.8_1_9:19336661-19337609:+|nuORF;ENST00000494124.2_1_9:19316810-19337609:+|nuORF	14.137123925751023	0.4201028297492154	4				NaN	NaN	0	NaN	733	2200	2928
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2952	12.763	NaN	51735	30	0	10197	0.214	+			44291	TSAPAAKPK	9	92	435.7554765877933	869.4964002423866	2	435.75555419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSAPAAKPK_	ENSG00000189060|ENST00000340857|H1-0	115.49404669440601	0.023927554121326553	4				NaN	NaN	0	NaN	747	2203	2951
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2953	12.767	NaN	10778	30	0	1788.7	0.106			+	27762	MREFGLGYGS	10	49	558.7589708166249	1115.5033887000498	2	558.7588500976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MREFGLGYGS_	REV__tr|U7T0H2|U7T0H2_FUSNUAsparagine--tRNAligaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=asnSPE=3SV=1	24.519189625965996	0.6795976720565101	4				NaN	NaN	0	NaN	748	2203	2951
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2954	12.769	NaN	14030	30	0	3907.1	0.106	+			10002	ERNANLVAC	9	54	495.24607614809776	988.4775993629955	2	495.24560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ERNANLVAC_	ENST00000544551.5_1_11:110101225-110101387:-|nuORF	21.9598887501803	0.5980208138527809	4				NaN	NaN	0	NaN	749	2203	2951
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2955	12.771	NaN	6485.6	30	0	1113.1	0.106	+			38822	SSNDKVIKK	9	54	509.7979924643297	NaN	0	509.7981262207031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSNDKVIKK_	ALDH3A1|p.P445Rfs*6|4|0.31|ENSG00000108602|chr17:19738336-19738336|G/-|frameshift_variant;ENSG00000108602|ENST00000225740|ALDH3A1;ENST00000479677.6_1_17:19641536-19646703:-|nuORF	52.936696900407355	0.1864545979552969	4				NaN	NaN	0	NaN	750	2203	2951
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2956	12.772	NaN	7587.9	30	0	1760.9	0.106				-1	MACILEMLAG	10	41	562.7605375229722	NaN	0	562.7406005859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C),Oxidation (M)	_MAC(Carbamidomethyl (C))ILEM(Oxidation (M))LAG_	ENST00000261497.8_1_17:20903335-20903428:-|nuORF	23.04248740728303	0.42010282974921537	4				NaN	NaN	0	NaN	751	2203	2951
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2957	12.774	NaN	33173	30	0	8173.2	0.035	+			14349	GTAAKSITKK	10	79	502.8087535436491	1003.6029541540983	2	502.8083190917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTAAKSITKK_	ENSG00000133574|ENST00000255945|GIMAP4	161.51181693189292	0.006384248322647003	4				NaN	NaN	0	NaN	752	2203	2951
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2958	12.775	NaN	9150.2	30	0	1569.7	0.14			+	-1	FCDTCTLI	8	36	515.2246319066122	1028.4347108800243	2	515.2243041992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C)	_FC(Carbamidomethyl (C))DTC(Carbamidomethyl (C))TLI_	REV__HERV1_I-int_dup2|chr3:34679996-34686397:+|1.0948245018220069|0.0565463038051543|4.28|448.0|177|3|sense	13.775330524044264	0.789990904165365	4				NaN	NaN	0	NaN	753	2203	2951
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2973	12.808	NaN	17956	30	0	2445.6	0.214	+			3124	ASGTSLHQK	9	74	464.7462689551767	927.4779849771534	2	464.74578857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASGTSLHQK_	ENSG00000157426|ENST00000205214|AASDH;ENST00000503808.5_1_4:57204874-57250274:-|nuORF;nc|ENSG00000157426|Q4L235-2|AASDH;nc|ENSG00000157426|Q4L235-3|AASDH;nc|ENSG00000157426|Q4L235-4|AASDH	171.53180478179638	0.0025054460641941692	4				NaN	NaN	0	NaN	765	2206	2972
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2974	12.812	NaN	7995.4	30	0	3538.6	0.106				-1	MEAGLGPGPL	10	39	500.2436857893844	NaN	0	500.24365234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))M(Oxidation (M))EAGLGPGPL_	ENST00000438389.6_1_19:55964371-55964461:-|nuORF	30.503639358989545	0.4000169810673414	4				NaN	NaN	0	NaN	766	2206	2972
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2975	12.814	NaN	10104	30	0	931.87	0.106			+	17885	IGCGHMIQP	9	67	478.2285216223963	NaN	0	478.2649230957031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IGCGHMIQP_	REV__ENSG00000140400|ENST00000267978|MAN2C1;REV__ENST00000563013.1_1_15:75653860-75654411:-|nuORF;REV__ENST00000563058.5_1_15:75653361-75654692:-|nuORF;REV__ENST00000563441.5_1_15:75651254-75660924:-|nuORF;REV__ENST00000564785.5_1_15:75653860-75654842:-|nuORF;REV__MAN2C1|p.R391C|1|0.39|ENSG00000140400|chr15:75361651-75361651|G/A|missense_variant;REV__MAN2C1|p.V752Cfs*60|1|0.43|ENSG00000140400|chr15:75358611-75358611|C/-|frameshift_variant;REV__nc|ENSG00000140400|Q9NTJ4-2|MAN2C1;REV__nc|ENSG00000140400|Q9NTJ4-3|MAN2C1;REV__nc|ENSG00000140400|Q9NTJ4-4|MAN2C1	50.0245360154114	0.20652386741182333	4				NaN	NaN	0	NaN	767	2206	2972
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2976	12.815	NaN	6177.7	30	0	1541.2	0.106	+			32371	QVAEQVLQQ	9	54	521.7782231643596	1041.541893395519	2	521.7799072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QVAEQVLQQ_	PARP10|p.R228Q|1|0.17|ENSG00000178685|chr8:143985319-143985319|C/T|missense_variant	62.107414245175825	0.1960472003779324	4				NaN	NaN	0	NaN	768	2206	2972
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2977	12.817	NaN	4488.4	30	0	900.36	0.106			+	-1	PAQVFGMLHS	10	40	551.7692635136926	1101.5239740941852	2	551.7694702148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_PAQVFGM(Oxidation (M))LHS_	REV__MYB|p.A224V|1|0.4|ENSG00000118513|chr6:135192467-135192467|C/T|missense_variant	14.864876125193954	0.7409144161711139	4				NaN	NaN	0	NaN	769	2206	2972
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2978	12.819	NaN	4273.6	30	0	1043.5	0.036			+	31452	QKSSEMKVE	9	38	533.2670659881802	NaN	0	532.7852783203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QKSSEMKVE_	REV__ENSG00000103888|ENST00000394685|CEMIP	19.1035232394073	0.3723251548669699	4				NaN	NaN	0	NaN	770	2206	2972
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2979	12.82	NaN	4025.7	30	0	733.99	0.14				-1	EAYCLCRG	8	38	514.7200317382812	NaN	0	514.7200317382812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C)	_EAYC(Carbamidomethyl (C))LC(Carbamidomethyl (C))RG_	ENSG00000172458|ENST00000682841|IL17D	19.359975847455235	1.7418937515398478	4				NaN	NaN	0	NaN	771	2206	2972
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2991	12.847	NaN	4222.3	30	0	872.53	0.214			+	-1	FAAPPQAPAC	10	37	515.2428455422678	NaN	0	515.242431640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_FAAPPQAPAC(Carbamidomethyl (C))_	REV__KRTAP10-2|p.V108Cfs*238|1|0.22|ENSG00000205445|chr21:44551137-44551137|C/-|frameshift_variant	18.324413293986947	0.4201028297492154	4				NaN	NaN	0	NaN	780	2209	2990
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2992	12.851	NaN	5110	30	0	1643.8	0.106	+			14944	GTMGVSKHK	9	44	472.752781386591	943.491009839982	2	472.7524108886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTMGVSKHK_	ENSG00000125676|ENST00000245838|THOC2;nc|ENSG00000125676|Q8NI27-2|THOC2	93.1432384553994	0.056003526918089595	4				NaN	NaN	0	NaN	781	2209	2990
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2993	12.853	NaN	7306.7	30	0	1205.4	0.106				-1	 	0	35	613.2835164391848	612.2762399725848	1	613.2836303710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	782	2209	2990
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2994	12.855	NaN	1448.3	30	0	397.17	0.106			+	-1	KGAGSAEAMA	10	25	454.71136474609375	NaN	0	454.71136474609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_KGAGSAEAM(Oxidation (M))A_	REV__ENST00000317025.12_1_8:38239467-38239719:-|nuORF	23.04248740728303	0.42010282974921537	4				NaN	NaN	0	NaN	783	2209	2990
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2995	12.857	NaN	3003.7	30	0	547.31	0.106				-1	LVYEPACK	8	38	490.2480806260142	978.4816083188284	2	490.2452697753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_LVYEPAC(Carbamidomethyl (C))K_	ENST00000448051.6_1_19:37957682-37958033:-|nuORF	35.200714571348534	0.6875396545722289	4				NaN	NaN	0	NaN	784	2209	2990
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2996	12.858	NaN	6073.9	30	0	1544.3	0.106	+			51108	YLYEPVYPK	9	33	586.3054476955256	1170.596342457851	2	586.30517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YLYEPVYPK_	ENSG00000107036|ENST00000414202|RIC1;nc|ENSG00000107036|Q4ADV7-2|RIC1;nc|ENSG00000107036|Q4ADV7-3|RIC1;RIC1|p.M978Ifs*8|1|0.04|ENSG00000107036|chr9:5765505-5765506|-/TTGGGAA|frameshift_variant;RIC1|p.M978Nfs*6|1|0.04|ENSG00000107036|chr9:5765503-5765504|-/A|frameshift_variant	15.641811463095205	0.6112419832031292	4				NaN	NaN	0	NaN	785	2209	2990
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	2997	12.86	NaN	3422.4	30	0	605.57	0.035			+	13917	GRLRRAEH	8	27	497.7848205566406	NaN	0	497.7848205566406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GRLRRAEH_	REV__ENST00000490689.3_1_3:157815575-157815770:-|nuORF	20.481830146152948	1.741893751539848	4				NaN	NaN	0	NaN	786	2209	2990
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3012	12.892	NaN	12845	30	0	3384.6	0.214			+	2886	ASASSKDT	8	50	383.68236307835804	765.3501732235161	2	383.68255615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASASSKDT_	REV__ENSG00000142864|ENST00000361219|SERBP1;REV__nc|ENSG00000142864|Q8NC51-2|SERBP1;REV__nc|ENSG00000142864|Q8NC51-4|SERBP1;REV__nc|ENSG00000142864|Q8NC51|SERBP1	38.80614096846853	0.6637206697844082	4				NaN	NaN	0	NaN	798	2212	3011
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3013	12.895	NaN	4910.5	30	0	1497.4	0.106	+			1663	AGQKLSGSSP	10	51	466.24566650390625	NaN	0	466.24566650390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AGQKLSGSSP_	ENSG00000205978|ENST00000382554|NYNRIN;nc|ENSG00000205978|Q9P2P1-2|NYNRIN	62.107414245175825	0.217068727747531	4				NaN	NaN	0	NaN	799	2212	3011
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3014	12.897	NaN	11116	30	0	4470.8	0.106				-1	CLELEHLT	8	37	507.7491149902344	NaN	0	507.7491149902344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_C(Carbamidomethyl (C))LELEHLT_	ENSG00000048544|ENST00000053468|MRPS10	26.79610172149135	1.7418937515398478	4				NaN	NaN	0	NaN	800	2212	3011
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3015	12.899	NaN	15986	30	0	2792.1	0.106			+	26750	LVNGQHGCVKP	11	65	576.3031739630763	1150.5917949929526	2	576.3035278320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LVNGQHGCVKP_	REV__ENSG00000103647|ENST00000261861|CORO2B;REV__nc|ENSG00000103647|Q9UQ03-2|CORO2B	28.5767321226876	0.690044582712672	4				NaN	NaN	0	NaN	801	2212	3011
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3016	12.901	NaN	11103	30	0	1638.9	0.106			+	29023	NSSDMVNKMEE	11	27	642.2666641962264	NaN	0	642.2659301757812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NSSDMVNKMEE_	REV__CD109|p.N1348Lfs*7|1|0.05|ENSG00000156535|chr6:73818517-73818518|-/CTCAGGAA|frameshift_variant;REV__CD109|p.Q424Kfs*20|1|0.29|ENSG00000156535|chr6:73766088-73766088|C/-|frameshift_variant;REV__ENSG00000156535|ENST00000287097|CD109;REV__nc|ENSG00000156535|Q6YHK3-2|CD109;REV__nc|ENSG00000156535|Q6YHK3-3|CD109;REV__nc|ENSG00000156535|Q6YHK3-4|CD109	12.811709888998246	0.456735970842152	4				NaN	NaN	0	NaN	802	2212	3011
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3017	12.903	NaN	5114.7	30	0	1490.8	0.036			+	-1	EEKCCSCSH	9	33	541.6907348632812	NaN	0	541.6907348632812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_EEKCC(Carbamidomethyl (C))SCSH_	REV__nc|ENSG00000198788|Q02817|MUC2	10.265252068803164	0.4022383999429647	4				NaN	NaN	0	NaN	803	2212	3011
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3018	12.903	NaN	9817	30	0	1729	0.142			+	43650	TISDWDLPMV	10	48	588.7818993831645	1175.549245833129	2	588.78271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TISDWDLPMV_	REV__ENST00000418761.6_1_5:126626657-126667083:+|nuORF;REV__ENST00000503335.6_1_5:126626657-126667083:+|nuORF	21.9598887501803	0.7004979571547932	4				NaN	NaN	0	NaN	804	2212	3011
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3032	12.935	NaN	13075	30	0	1685	0.214	+			31204	QGRLATAGLG	10	73	472.26993737261904	942.5253218120381	2	472.26959228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QGRLATAGLG_	ENST00000325285.7_2_9:139837107-139837825:-|nuORF;ENST00000459905.5_1_9:139837219-139837813:-|nuORF	77.31757898189308	0.2175361111083648	4				NaN	NaN	0	NaN	815	2215	3031
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3033	12.939	NaN	10556	30	0	1061.1	0.106			+	37387	SLGAAAVRPN	10	83	478.2687712204398	954.5229895076797	2	479.2717590332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLGAAAVRPN_	REV__ENST00000333003.9_1_12:95461150-95467288:-|nuORF;REV__ENST00000548966.5_1_12:95456464-95467288:-|nuORF	45.97224482568171	0.49411383603842696	4				NaN	NaN	0	NaN	816	2215	3031
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3034	12.941	NaN	11656	30	0	2356.2	0.106	+			4134	ATEMGTTKK	9	71	483.75014691481203	965.4857408964241	2	483.75006103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATEMGTTKK_	ENSG00000121152|ENST00000240423|NCAPH;ENST00000477409.1_1_2:97001567-97024936:+|nuORF;nc|ENSG00000121152|Q15003-2|NCAPH;NCAPH|p.D469Ifs*25|1|0.25|ENSG00000121152|chr2:96360183-96360183|A/-|frameshift_variant	153.03582135801034	0.006161527642367307	4				NaN	NaN	0	NaN	817	2215	3031
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3035	12.942	NaN	14061	30	0	5825.9	0.106			+	-1	TEMYPKGVMTS	11	28	630.2866597245833	1258.5587665159665	2	630.2871704101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_TEMYPKGVM(Oxidation (M))TS_	REV__ACTL7A|p.T98M|1|0.25|ENSG00000187003|chr9:108862615-108862615|C/T|missense_variant	13.45404412870281	0.8074920481021843	4				NaN	NaN	0	NaN	818	2215	3031
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3036	12.944	NaN	8936.4	30	0	1491.8	0.106				-1	MIRVWCLQT	9	48	583.2976770372076	1164.580801141215	2	583.2977294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_M(Oxidation (M))IRVWCLQT_	PHIP|p.R255Q|1|0.39|ENSG00000146247|chr6:79026001-79026001|C/T|missense_variant	24.519189625965996	0.574102787014149	4				NaN	NaN	0	NaN	819	2215	3031
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3037	12.946	NaN	3152.3	30	0	493.6	0.035			+	9256	EGVQPHPVAL	10	46	523.7835083007812	NaN	0	523.7835083007812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EGVQPHPVAL_	REV__ENSG00000113716|ENST00000502717|HMGXB3	35.61828744233558	0.3832230071539346	4				NaN	NaN	0	NaN	820	2215	3031
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3038	12.947	NaN	8175.9	30	0	1867.1	0.142			+	-1	EQAATMSSINL	11	45	590.7801332580383	1179.5457135828765	2	590.7802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_EQAATM(Oxidation (M))SSINL_	REV__ENSG00000213892|ENST00000587331|CEACAM16	25.125986553469783	0.7262400895305658	4				NaN	NaN	0	NaN	821	2215	3031
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3052	12.977	NaN	114460	30	0	25634	0.214	+			33953	RSASSATQVHK	11	94	586.3126587362889	1170.6107645393777	2	586.3123779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RSASSATQVHK_	ENST00000361272.8_2_8:17102747-17104366:-|nuORF	90.14881205920913	0.09816545110109878	4				NaN	NaN	0	NaN	832	2218	3051
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3053	12.981	NaN	19728	30	0	6401.1	0.106	+			29528	PEDKNPFKEK	10	80	616.3190963651394	1230.6236397970788	2	616.3191528320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PEDKNPFKEK_	ENSG00000127920|ENST00000248564|GNG11;ENSG00000167083|ENST00000507680|GNGT2	41.080066990542036	0.5391928043837881	4				NaN	NaN	0	NaN	833	2218	3051
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3054	12.983	NaN	3910.8	30	0	607.22	0.106	+			38149	SQAGHTLHH	9	49	494.24144777631426	986.4683426194285	2	494.24127197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SQAGHTLHH_	ENSG00000057294|ENST00000340811|PKP2;nc|ENSG00000057294|Q99959|PKP2;PKP2|p.K456Nfs*3|1|0.41|ENSG00000057294|chr12:32850776-32850776|T/-|frameshift_variant	61.691277971877994	0.19951612995419254	4				NaN	NaN	0	NaN	834	2218	3051
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3055	12.985	NaN	23869	30	0	3810.4	0.106			+	-1	PRCCVSMMTR	10	71	665.2803586068826	1328.546164280565	2	665.279541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C),2 Oxidation (M)	_PRC(Carbamidomethyl (C))C(Carbamidomethyl (C))VSM(Oxidation (M))M(Oxidation (M))TR_	REV__ENST00000532859.1_1_11:43755320-43755701:+|nuORF	23.52269567125451	0.6877354443478558	4				NaN	NaN	0	NaN	835	2218	3051
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3056	12.986	NaN	81190	30	0	33307	0.106	+			33650	RMPLDFSNTV	10	76	598.2918109664004	1194.5690689996006	2	598.2926635742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_RM(Oxidation (M))PLDFSNTV_	NLRC3|p.T226M|1|0.42|ENSG00000167984|chr16:3564260-3564260|G/A|missense_variant	82.7504851949679	0.1731497355276012	4				NaN	NaN	0	NaN	836	2218	3051
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3057	12.988	NaN	4142.3	30	0	713.56	0.036			+	2441	APGVQVQQQP	10	60	526.2814233800711	1050.5482938269422	2	526.2816162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_APGVQVQQQP_	REV__ENST00000399702.5_1_16:2653454-2660566:+|nuORF;REV__ENST00000566272.1_1_16:2653454-2663962:+|nuORF	27.882242232435846	0.6521336255503853	4				NaN	NaN	0	NaN	837	2218	3051
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3058	12.989	NaN	1960.3	30	0	199.41	0.14			+	16521	HEVGSGAI	8	44	385.1957857950524	NaN	0	385.1957702636719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HEVGSGAI_	REV__AKAP12|p.E1404Rfs*18|1|0.17|ENSG00000131016|chr6:151352600-151352600|G/-|frameshift_variant;REV__AKAP12|p.N1461Mfs*26|1|0.52|ENSG00000131016|chr6:151352767-151352767|A/-|frameshift_variant;REV__AKAP12|p.P1160Lfs*18|3|0.22|ENSG00000131016|chr6:151351865-151351865|C/-|frameshift_variant;REV__ENSG00000131016|ENST00000402676|AKAP12;REV__nc|ENSG00000131016|Q02952-2|AKAP12;REV__nc|ENSG00000131016|Q02952-3|AKAP12	54.76467175910256	1.7418937515398478	4				NaN	NaN	0	NaN	838	2218	3051
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3071	13.018	NaN	38083	30	0	10046	0.212			+	-1	SGPVMERWYC	10	66	635.2733639187953	1268.5321749043906	2	635.2732543945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SGPVMERWYC_	REV__ENSG00000179761|ENST00000323372|PIPOX;REV__ENST00000580241.5_1_17:27280417-27383320:+|nuORF;REV__ENST00000583215.5_1_17:27338116-27383320:+|nuORF;REV__PIPOX|p.V226M|1|0.27|ENSG00000179761|chr17:29054560-29054560|G/A|missense_variant	24.519189625965996	0.6795976720565101	4				NaN	NaN	0	NaN	848	2221	3070
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3072	13.022	NaN	19398	30	0	5237	0.106	+			24019	LEEEEQNEEE	10	53	639.255237008384	1276.495921083568	2	639.255126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LEEEEQNEEE_	ENSG00000148229|ENST00000374171|POLE3	39.252832667884924	0.5560298534376815	4				NaN	NaN	0	NaN	849	2221	3070
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3073	13.024	NaN	13091	30	0	2147.6	0.106			+	27242	MEPDTMGMSIL	11	58	612.7688870611998	1223.5232211891996	2	612.7688598632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MEPDTMGMSIL_	REV__AKAP13|p.T2400Nfs*3|1|0.33|ENSG00000170776|chr15:85730617-85730618|-/C|frameshift_variant;REV__ENSG00000170776|ENST00000394518|AKAP13;REV__nc|ENSG00000170776|Q12802-2|AKAP13;REV__nc|ENSG00000170776|Q12802-4|AKAP13	24.519189625965996	0.7326048944360514	4				NaN	NaN	0	NaN	850	2221	3070
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3074	13.025	NaN	17027	30	0	3716.3	0.106				-1	SQSGQCQFCEP	11	44	664.2571149167195	1326.499676900239	2	664.2564697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_SQSGQC(Carbamidomethyl (C))QFC(Carbamidomethyl (C))EP_	ENSG00000135473|ENST00000440411|PAN2;ENST00000547994.5_1_12:56718022-56726878:-|nuORF;ENST00000551359.5_1_12:56713025-56726878:-|nuORF;nc|ENSG00000135473|Q504Q3-3|PAN2;nc|ENSG00000135473|Q504Q3|PAN2;PAN2|p.A1143Pfs*11|1|0.08|ENSG00000135473|chr12:56318384-56318384|C/-|frameshift_variant	17.468008924990375	0.788697330333842	4				NaN	NaN	0	NaN	851	2221	3070
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3075	13.027	NaN	11046	30	0	1772.4	0.106	+			29068	NTIRTCSNPF	10	62	605.2867725647237	1208.5589921962473	2	605.2871704101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_NTIRTC(Carbamidomethyl (C))SNPF_	CRIM1|p.P856Lfs*67|1|0.19|ENSG00000150938|chr2:36537485-36537485|C/-|frameshift_variant;ENSG00000150938|ENST00000280527|CRIM1	42.86426827375447	0.522752283233888	4				NaN	NaN	0	NaN	852	2221	3070
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3076	13.029	NaN	10748	30	0	2144.1	0.106				-1	 	0	43	647.2531605097171	646.245884043117	1	647.252685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	853	2221	3070
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3077	13.031	NaN	10703	30	0	2003.4	0.04				-1	CCCCRRRCC	9	52	667.2318002352946	1332.449047537389	2	667.2305908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	4 Carbamidomethyl (C)	_C(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))RRRCC_	ENSG00000183067|ENST00000380588|IGSF5	17.364965105453717	0.6112419832031293	4				NaN	NaN	0	NaN	854	2221	3070
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3091	13.061	NaN	12055	30	0	1803.6	0.214	+			6266	AVSKVSTNK	9	75	467.2721609340776	932.5297689349552	2	467.2716064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVSKVSTNK_	ENSG00000173744|ENST00000310078|AGFG1;nc|ENSG00000173744|P52594-2|AGFG1;nc|ENSG00000173744|P52594-3|AGFG1;nc|ENSG00000173744|P52594-4|AGFG1	140.11223852658463	0.010427410095706195	4				NaN	NaN	0	NaN	865	2224	3090
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3092	13.064	NaN	7347	30	0	2126.8	0.106	+			3477	ASSEFAKKK	9	66	498.27979561917573	994.5450383051515	2	498.2794189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASSEFAKKK_	DHX38|p.A739Pfs*17|1|0.38|ENSG00000140829|chr16:72105086-72105086|G/-|frameshift_variant;DHX38|p.E514K|1|0.33|ENSG00000140829|chr16:72103114-72103114|G/A|missense_variant;DHX38|p.G603Efs*22|1|0.36|ENSG00000140829|chr16:72103767-72103767|G/-|frameshift_variant;DHX38|p.G697Wfs*16|1|0.38|ENSG00000140829|chr16:72104557-72104558|-/T|frameshift_variant;ENSG00000140829|ENST00000268482|DHX38;ENST00000566329.1_1_16:72134993-72137705:+|nuORF	127.46168284122857	0.016682644177004526	4				NaN	NaN	0	NaN	866	2224	3090
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3093	13.066	NaN	16993	30	0	2102.6	0.106	+			39043	SSSPGTSVKK	10	75	489.26690477379105	976.5192566143821	2	489.2666320800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSSPGTSVKK_	ENSG00000135720|ENST00000258198|DYNC1LI2;nc|ENSG00000135720|O43237-2|DYNC1LI2	150.36159442982594	0.008431331982545942	4				NaN	NaN	0	NaN	867	2224	3090
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3094	13.068	NaN	1500.2	30	0	258.58	0.106	+			47912	VSLRSYGTI	9	33	332.5218687124829	994.5437767376487	3	332.5220947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSLRSYGTI_	ENSG00000221996|ENST00000624801|OR52B4	12.959181472943097	0.6112419832031292	4				NaN	NaN	0	NaN	868	2224	3090
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3095	13.07	NaN	9257.1	30	0	1661.9	0.106			+	-1	YCNHEMKI	8	53	527.2274012473492	1052.4402495614984	2	527.2283325195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_YCNHEM(Oxidation (M))KI_	REV__ENST00000551108.1_1_12:29542438-29639896:+|nuORF	25.450171626174864	0.7628259754767981	4				NaN	NaN	0	NaN	869	2224	3090
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3096	13.072	NaN	3360	30	0	1267	0.034				-1	 	0	30	486.2591900862907	970.5038272393814	2	486.2586364746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	870	2224	3090
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3097	13.072	NaN	13945	30	0	2319.3	0.141				-1	RCCCSTKQ	8	53	550.2281458932399	NaN	0	550.3033447265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	3 Carbamidomethyl (C)	_RC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))STKQ_	BRIP1|p.I504Nfs*7|1|0.53|ENSG00000136492|chr17:61784387-61784388|-/T|frameshift_variant;ENSG00000136492|ENST00000259008|BRIP1;nc|ENSG00000136492|Q9BX63-2|BRIP1	34.172542307311794	1.7418937515398478	4				NaN	NaN	0	NaN	871	2224	3090
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3112	13.105	NaN	22093	30	0	4029.7	0.214	+			30060	PQAWLGSWG	9	56	501.24598996125513	1000.4774269893103	2	501.2456970214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PQAWLGSWG_	ENST00000460830.1_1_9:140006993-140007673:-|nuORF	35.61828744233558	0.47037581924408073	4				NaN	NaN	0	NaN	883	2227	3111
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3113	13.109	NaN	13381	30	0	2768.4	0.106	+			10537	EWQCLDPGQ	9	52	538.2269806081243	1074.4394082830486	2	538.2274169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EWQCLDPGQ_	ENSG00000147789|ENST00000532777|ZNF7;ENST00000530682.5_1_8:146054445-146055231:+|nuORF;nc|ENSG00000147789|P17097-2|ZNF7;nc|ENSG00000147789|P17097-3|ZNF7;ZNF7|p.K231Sfs*59|1|0.42|ENSG00000147789|chr8:144841793-144841793|A/-|frameshift_variant;ZNF7|p.L232Vfs*3|1|0.21|ENSG00000147789|chr8:144841792-144841793|-/A|frameshift_variant	31.529811441608018	0.5085848003137583	4				NaN	NaN	0	NaN	884	2227	3111
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3114	13.111	NaN	11330	30	0	1527.4	0.106	+			6098	AVNKQLHQK	9	63	533.3119814196101	1064.6094099060201	2	533.3121948242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVNKQLHQK_	ENSG00000128944|ENST00000249776|KNSTRN;ENST00000560220.5_1_15:40676698-40685795:+|nuORF;nc|ENSG00000128944|Q9Y448-2|KNSTRN;nc|ENSG00000128944|Q9Y448-3|KNSTRN	136.26810882979174	0.012230845423532208	4				NaN	NaN	0	NaN	885	2227	3111
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3115	13.113	NaN	7603.6	30	0	2265.6	0.106	+			9785	ENSLDDFED	9	28	542.209228515625	NaN	0	542.209228515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ENSLDDFED_	ENSG00000119922|ENST00000371826|IFIT2;IFIT2|p.K272Rfs*3|2|0.2|ENSG00000119922|chr10:89306767-89306767|A/-|frameshift_variant;IFIT2|p.N67Tfs*14|1|0.28|ENSG00000119922|chr10:89306153-89306153|A/-|frameshift_variant	15.641811463095205	0.38404136392510424	4				NaN	NaN	0	NaN	886	2227	3111
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3116	13.115	NaN	9045.4	30	0	1611.3	0.106			+	8623	ECYMSPTDGP	10	51	550.2065623200831	NaN	0	550.2068481445312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ECYMSPTDGP_	REV__ADARB2|p.A703Rfs*7|1|0.36|ENSG00000185736|chr10:1183306-1183306|C/-|frameshift_variant;REV__ENSG00000185736|ENST00000381312|ADARB2;REV__nc|ENSG00000185736|Q9NS39-2|ADARB2	20.94693142431847	0.4201028297492154	4				NaN	NaN	0	NaN	887	2227	3111
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3117	13.117	NaN	5859.8	30	0	1038.4	0.035				-1	 	0	31	514.2624051105433	513.2551286439433	1	515.7225952148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	888	2227	3111
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3118	13.117	NaN	4831.6	30	0	1101.4	0.14			+	-1	QCFMFVPK	8	48	508.24029541015625	NaN	0	508.24029541015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_QCFM(Oxidation (M))FVPK_	REV__nc|ENSG00000255374|P59539|TAS2R45	19.359975847455235	1.7418937515398478	4				NaN	NaN	0	NaN	889	2227	3111
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3134	13.152	NaN	23107	30	0	2177.3	0.214	+			3538	ASSSGSTAIKK	11	91	518.785528746835	NaN	0	518.7855224609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASSSGSTAIKK_	ENSG00000131171|ENST00000373212|SH3BGRL	72.09557110113691	0.12082447305505499	4				NaN	NaN	0	NaN	902	2230	3133
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3135	13.156	NaN	50121	30	0	12084	0.106	+			39485	STFGGHKSEK	10	83	539.2705593112543	1076.5265656893084	2	539.2700805664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STFGGHKSEK_	ABL1|p.R785Gfs*3|2|0.3|ENSG00000097007|chr9:130884637-130884637|C/-|frameshift_variant;ENSG00000097007|ENST00000318560|ABL1;nc|ENSG00000097007|P00519-2|ABL1	159.33581866081465	0.006837894036646432	4				NaN	NaN	0	NaN	903	2230	3133
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3136	13.158	NaN	10060	30	0	1713.7	0.106			+	43574	TIDPATPW	8	41	450.72728356561043	NaN	0	450.7272644042969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TIDPATPW_	REV__ENSG00000038358|ENST00000358933|EDC4;REV__ENST00000576972.5_1_16:67914666-67915321:+|nuORF;REV__nc|ENSG00000038358|Q6P2E9-2|EDC4	26.79610172149135	1.7418937515398478	4				NaN	NaN	0	NaN	904	2230	3133
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3137	13.16	NaN	4614.6	30	0	545.43	0.106	+			3484	ASSGALRSK	9	61	438.7483377596126	NaN	0	438.74835205078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASSGALRSK_	ENSG00000067066|ENST00000340126|SP100;nc|ENSG00000067066|P23497-2|SP100;nc|ENSG00000067066|P23497-3|SP100;nc|ENSG00000067066|P23497-5|SP100;nc|ENSG00000067066|P23497-6|SP100;nc|ENSG00000067066|P23497-7|SP100;nc|ENSG00000067066|P23497|SP100;SP100|p.A416T|1|0.67|ENSG00000067066|chr2:230467170-230467170|G/A|missense_variant	85.86182877749512	0.05129763505578642	4				NaN	NaN	0	NaN	905	2230	3133
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3138	13.162	NaN	6422.3	30	0	945.8	0.106			+	35001	SAATRPQPK	9	67	478.2687712204398	954.5229895076797	2	478.26824951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SAATRPQPK_	REV__ENSG00000186912|ENST00000374519|P2RY4	49.536043120802724	0.308405419312776	4				NaN	NaN	0	NaN	906	2230	3133
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3139	13.163	NaN	17989	30	0	4524.2	0.036				-1	WMGLMVFAM	9	49	551.2490939331043	1100.4836349330085	2	551.2491455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_WM(Oxidation (M))GLMVFAM_	ENSG00000169083|ENST00000374690|AR;nc|ENSG00000169083|P10275-2|AR	21.70233525837049	0.6004277881119521	4				NaN	NaN	0	NaN	907	2230	3133
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3140	13.164	NaN	7539.8	30	0	1158.8	0.139	+			38989	SSSEPVHAK	9	64	471.2380933047169	940.4616336762339	2	471.23779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSSEPVHAK_	ENSG00000173145|ENST00000371361|NOC3L;NOC3L|p.K235Nfs*2|1|0.43|ENSG00000173145|chr10:94353049-94353049|T/-|frameshift_variant;NOC3L|p.L425Yfs*3|1|0.14|ENSG00000173145|chr10:94346540-94346540|A/-|frameshift_variant;NOC3L|p.T423Hfs*5|1|0.09|ENSG00000173145|chr10:94346547-94346547|T/-|frameshift_variant	118.74307786436346	0.02196067127630568	4				NaN	NaN	0	NaN	908	2230	3133
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3155	13.197	NaN	316950	30	0	65139	0.136				-1	 	0	80	520.2413096432415	1038.468066353283	2	520.2410888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	920	2233	3154
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3156	13.2	NaN	214400	30	0	34643	0.106	+			35461	SASSATQVHK	10	123	508.26208805047236	1014.5096231677447	2	508.2619323730469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SASSATQVHK_	ENST00000361272.8_2_8:17102747-17104366:-|nuORF	190.57387458491363	0.0001768487809077591	4				NaN	NaN	0	NaN	921	2233	3154
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3157	13.202	NaN	82222	30	0	20937	0.106				-1	MPQNESETQ	9	65	540.2205809771094	1078.4266090210187	2	540.2199096679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))PQNESETQ_	CNBD1|p.V269G|1|0.16|ENSG00000176571|chr8:87284712-87284712|T/G|missense_variant;ENSG00000176571|ENST00000518476|CNBD1	39.252832667884924	0.4290233611298554	4				NaN	NaN	0	NaN	922	2233	3154
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3158	13.204	NaN	65404	30	0	22424	0.106			+	50940	YHGDNEEEE	9	59	561.2041151144779	1120.3936772957557	2	561.2041625976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YHGDNEEEE_	REV__ATG2B|p.F1495Lfs*16|1|0.09|ENSG00000066739|chr14:96306735-96306735|A/-|frameshift_variant;REV__ATG2B|p.Q1407Lfs*8|1|0.06|ENSG00000066739|chr14:96309536-96309537|-/AATAA|frameshift_variant;REV__ENSG00000066739|ENST00000359933|ATG2B;REV__ENST00000473234.1_1_14:96783570-96789065:-|nuORF	21.9598887501803	0.5980208138527809	4				NaN	NaN	0	NaN	923	2233	3154
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3159	13.205	NaN	43480	30	0	6380.2	0.106			+	7481	DGCSVSFEPQ	10	68	534.7183990926081	1067.4222452520162	2	534.7182006835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DGCSVSFEPQ_	REV__ITGB4|p.R1003C|1|0.39|ENSG00000132470|chr17:75743757-75743757|C/T|missense_variant	31.529811441608018	0.6223461015008678	4				NaN	NaN	0	NaN	924	2233	3154
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3160	13.207	NaN	52631	30	0	6891.5	0.106				-1	YRVGCCSSCC	10	62	569.2017296952762	1136.3889064573523	2	569.2021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_YRVGCCSSC(Carbamidomethyl (C))C_	nc|ENSG00000284622|A0A286YEX9|SCYGR10;nc|ENSG00000284629|A0A286YEY9|SCYGR1;nc|ENSG00000284631|A0A286YEV6|SCYGR4;nc|ENSG00000284635|A0A286YFG1|SCYGR8;nc|ENSG00000284643|A0A286YFB4|SCYGR2;nc|ENSG00000284667|A0A286YF46|SCYGR5;nc|ENSG00000284704|A0A286YF60|SCYGR3;nc|ENSG00000284718|A0A286YF01|SCYGR7;nc|ENSG00000284725|A0A286YF77|SCYGR6;nc|ENSG00000285843|P0DSO2|SCYGR9	19.996771675451527	0.7148376616046445	4				NaN	NaN	0	NaN	925	2233	3154
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3161	13.209	NaN	17378	30	0	3708.5	0.035				-1	 	0	46	497.28763063946315	992.5607083457263	2	497.2872314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	926	2233	3154
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3180	13.244	NaN	11089	30	0	1760.9	0.214				-1	 	0	70	514.2624051105433	513.2551286439433	1	514.2620849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	942	2236	3179
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3181	13.247	NaN	7012	30	0	1492.9	0.106	+			13468	GLLDESFLR	9	57	525.2831645898035	1048.551776246407	2	525.2835083007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GLLDESFLR_	ENSG00000130939|ENST00000343090|UBE4B;nc|ENSG00000130939|O95155-2|UBE4B;nc|ENSG00000130939|O95155-3|UBE4B;nc|ENSG00000130939|O95155-4|UBE4B;UBE4B|p.F894Lfs*19|1|0.23|ENSG00000130939|chr1:10149269-10149269|T/-|frameshift_variant;UBE4B|p.L1117Ffs*8|1|0.36|ENSG00000130939|chr1:10171152-10171153|-/T|frameshift_variant	36.446750945000026	0.4619375763483977	4				NaN	NaN	0	NaN	943	2236	3179
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3182	13.249	NaN	9787.2	30	0	4368.4	0.106			+	50287	WSAESFAA	8	29	434.6960256780941	867.3774984229882	2	434.6960144042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_WSAESFAA_	REV__ENSG00000184502|ENST00000329402|GAST	13.775330524044264	0.789990904165365	4				NaN	NaN	0	NaN	944	2236	3179
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3183	13.251	NaN	10215	30	0	2906.5	0.106				-1	QMALQCDMT	9	40	557.2227633716182	NaN	0	557.2223510742188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_QM(Oxidation (M))ALQC(Carbamidomethyl (C))DMT_	ENSG00000007174|ENST00000262442|DNAH9;nc|ENSG00000007174|Q9NYC9-2|DNAH9;nc|ENSG00000007174|Q9NYC9-3|DNAH9	21.9598887501803	0.3626577482100488	4				NaN	NaN	0	NaN	945	2236	3179
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3184	13.253	NaN	10186	30	0	2693.5	0.106			+	-1	PLVVMMRCA	9	51	546.7737632074724	1091.5329734817446	2	546.6974487304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C),Oxidation (M)	_PLVVM(Oxidation (M))MRC(Carbamidomethyl (C))A_	REV__ENST00000460511.5_1_2:128281301-128284055:-|nuORF	30.503639358989545	0.5181749237905803	4				NaN	NaN	0	NaN	946	2236	3179
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3185	13.255	NaN	9680.6	30	0	2518.6	0.037			+	-1	CSHFETECF	9	34	580.213211498067	1158.411870062934	2	580.2144165039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_C(Carbamidomethyl (C))SHFETECF_	REV__AluSp_dup30039|chr11:2206832-2207060:-|1.0360777825034435|0.0074288008312297|7.12|456.0|10|1|anti-sense	11.511019455917149	0.6112419832031292	4				NaN	NaN	0	NaN	947	2236	3179
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3186	13.255	NaN	10530	30	0	2237	0.141			+	-1	RTAEQPGACP	10	43	543.7542646520425	1085.4939763708849	2	543.7543334960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_RTAEQPGAC(Carbamidomethyl (C))P_	REV__ENST00000360240.10_1_3:48040322-48130446:-|nuORF	19.1035232394073	0.7193765342308498	4				NaN	NaN	0	NaN	948	2236	3179
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3202	13.291	NaN	89557	30	0	50668	0.201			+	6713	CAASYALKLL	10	57	526.793525557386	1051.572498181572	2	526.7938842773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CAASYALKLL_	REV__BMPR1A|p.G341R|1|0.37|ENSG00000107779|chr10:86919324-86919324|G/C|missense_variant;REV__ENSG00000107779|ENST00000372037|BMPR1A;REV__ENST00000403332.2_1_6:129478670-129479855:-|nuORF	39.252832667884924	0.5560298534376815	4				NaN	NaN	0	NaN	961	2239	3201
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3203	13.294	NaN	33926	30	0	9802.2	0.106			+	-1	CMTVTWSNGL	10	65	592.7569469656943	1183.4993409981885	2	592.7573852539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_C(Carbamidomethyl (C))M(Oxidation (M))TVTWSNGL_	REV__nc|ENSG00000176659|Q8N268|LINC02910	34.172542307311794	0.6007644933930345	4				NaN	NaN	0	NaN	962	2239	3201
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3204	13.296	NaN	6200.1	30	0	1179.3	0.106	+			47660	VSDANQHVK	9	63	499.2565466488334	NaN	0	499.2567443847656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSDANQHVK_	ENSG00000105568|ENST00000322088|PPP2R1A	95.81516180277367	0.029873745472008544	4				NaN	NaN	0	NaN	963	2239	3201
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3205	13.298	NaN	14841	30	0	3892.4	0.106			+	45447	TWDRALEDE	9	51	567.7568582981986	1133.4991636631971	2	567.7570190429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TWDRALEDE_	REV__ENSG00000196700|ENST00000369888|ZNF512B	19.996771675451527	0.6112419832031292	4				NaN	NaN	0	NaN	964	2239	3201
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3206	13.3	NaN	7352.3	30	0	1442.6	0.106			+	39889	STLRDITEQ	9	51	531.775065709581	1061.5355784859619	2	531.7757568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STLRDITEQ_	REV__ENSG00000198624|ENST00000355417|CCDC69;REV__ENST00000521308.5_1_5:150563000-150603580:-|nuORF	25.125986553469783	0.568431947241088	4				NaN	NaN	0	NaN	965	2239	3201
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3207	13.301	NaN	16137	30	0	3394.7	0.106			+	44040	TPPMQVLDEP	10	65	563.7753945914129	1125.5362362496257	2	563.7758178710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TPPMQVLDEP_	REV__ENSG00000157613|ENST00000621158|CREB3L1	42.396135135203025	0.5270658956260207	4				NaN	NaN	0	NaN	966	2239	3201
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3208	13.303	NaN	22209	30	0	5172.9	0.037			+	-1	EDLAEMVIPQ	10	46	580.7781869174588	1159.5418209017175	2	580.7783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_EDLAEM(Oxidation (M))VIPQ_	REV__ENSG00000110786|ENST00000358540|PTPN5;REV__nc|ENSG00000110786|P54829-2|PTPN5;REV__nc|ENSG00000110786|P54829-3|PTPN5;REV__PTPN5|p.E272Dfs*40|1|0.08|ENSG00000110786|chr11:18740702-18740703|-/CCATG|frameshift_variant;REV__PTPN5|p.M56Rfs*70|1|0.24|ENSG00000110786|chr11:18744130-18744131|-/TC|frameshift_variant	34.172542307311794	0.6007644933930345	4				NaN	NaN	0	NaN	967	2239	3201
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3227	13.341	NaN	8119.5	30	0	2306	0.214			+	-1	ATMPRPTQ	8	70	459.22927050835494	916.4439880835099	2	459.2288818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ATM(Oxidation (M))PRPTQ_	REV__CNTNAP1|p.R1226Q|1|0.22|ENSG00000108797|chr17:42697662-42697662|G/A|missense_variant	66.42927471994793	0.4381325844043345	4				NaN	NaN	0	NaN	983	2242	3226
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3228	13.345	NaN	3387.5	30	0	1336.4	0.106	+			19455	KARLTPSLP	9	47	328.20608082943545	981.5964130885063	3	328.2062072753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KARLTPSLP_	nc|ENSG00000092345|Q92904-2|DAZL	21.9598887501803	0.5980208138527809	4				NaN	NaN	0	NaN	984	2242	3226
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3229	13.347	NaN	7584.3	30	0	1890.4	0.106	+			6799	CFVTSFEWCS	10	36	604.7386077892842	1207.4626626453683	2	604.7396240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_CFVTSFEWCS_	ENSG00000269190|ENST00000292852|FBXO17	10.865556482863946	0.761236200923858	4				NaN	NaN	0	NaN	985	2242	3226
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3230	13.348	NaN	4065.7	30	0	735.54	0.106			+	12051	FYVKWADD	8	35	522.2469985672294	1042.4794442012587	2	522.2468872070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FYVKWADD_	REV__ENSG00000198722|ENST00000635942|UNC13B;REV__nc|ENSG00000198722|O14795-2|UNC13B;REV__nc|ENSG00000198722|O14795|UNC13B	14.664097394203935	0.7913966407026132	4				NaN	NaN	0	NaN	986	2242	3226
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3231	13.35	NaN	5122.9	30	0	1180	0.106			+	29608	PFTPLSNVMS	10	37	546.7737632074724	1091.5329734817446	2	546.772705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PFTPLSNVMS_	REV__CREBBP|p.Q2411Sfs*2|1|0.24|ENSG00000005339|chr16:3727816-3727816|G/-|frameshift_variant;REV__CREBBP|p.S976Pfs*22|1|0.09|ENSG00000005339|chr16:3769309-3769309|G/-|frameshift_variant;REV__ENSG00000005339|ENST00000262367|CREBBP;REV__nc|ENSG00000005339|Q92793-2|CREBBP	21.9598887501803	0.7004979571547932	4				NaN	NaN	0	NaN	987	2242	3226
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3232	13.352	NaN	24256	30	0	3126.6	0.035			+	39780	STKQSFSDQ	9	77	514.2363505487154	1026.4581481642308	2	514.2366943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STKQSFSDQ_	REV__ENST00000304449.5_2_X:118725002-118725137:-|nuORF	98.58198989935565	0.04066992115528678	4				NaN	NaN	0	NaN	988	2242	3226
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3233	13.353	NaN	7036.3	30	0	1517	0.143				-1	PECTTDSSSSK	11	39	599.7506103515625	NaN	0	599.7506103515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_PEC(Carbamidomethyl (C))TTDSSSSK_	ENSG00000143952|ENST00000272322|VPS54;nc|ENSG00000143952|Q9P1Q0-2|VPS54;nc|ENSG00000143952|Q9P1Q0-3|VPS54;nc|ENSG00000143952|Q9P1Q0-4|VPS54	23.52269567125451	0.456735970842152	4				NaN	NaN	0	NaN	989	2242	3226
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3246	13.383	NaN	11505	30	0	2457.9	0.214	+			5503	AVAEASKER	9	70	480.75911752718997	959.50368212118	2	480.7588195800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVAEASKER_	CDC42BPB|p.L928Ffs*26|1|0.05|ENSG00000198752|chr14:102963098-102963099|-/A|frameshift_variant;CDC42BPB|p.N918Tfs*5|1|0.27|ENSG00000198752|chr14:102963129-102963129|T/-|frameshift_variant;CDC42BPB|p.Q1073Rfs*38|2|0.31|ENSG00000198752|chr14:102950558-102950558|G/-|frameshift_variant;ENSG00000198752|ENST00000361246|CDC42BPB	138.06239232086	0.011389075116295402	4				NaN	NaN	0	NaN	999	2245	3245
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3247	13.386	NaN	21941	30	0	2221.2	0.106	+			5143	ATSVAAARK	9	91	437.7585832248371	873.5026135164742	2	437.7586669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATSVAAARK_	chr20:45814470-45815390|467|14.73|0.65|4.5|+|ENST00000335046|UBE2C,UBE2C;chr20:45814470-45815854|444|10.08|0.42|4.6|+|ENST00000405520|UBE2C,UBE2C;chr20:45815540-45815854|455|13.48|0.56|4.59|+|ENST00000617055|UBE2C,UBE2C;ENSG00000175063|ENST00000356455|UBE2C;nc|ENSG00000175063|O00762-3|UBE2C;nc|ENSG00000175063|O00762-4|UBE2C	85.16082228582465	0.07850854922700509	4				NaN	NaN	0	NaN	1000	2245	3245
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3248	13.388	NaN	5432.3	30	0	759.52	0.106	+			47997	VSQEERLI	8	55	487.26893369929843	972.5233144653969	2	487.2685241699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSQEERLI_	AKAP9|p.L1203Yfs*16|1|0.24|ENSG00000127914|chr7:92014319-92014319|T/-|frameshift_variant;AKAP9|p.Q3083Nfs*28|1|0.15|ENSG00000127914|chr7:92089389-92089390|-/TGAATATCAAGCAGCTATGGAATGCC|frameshift_variant;AKAP9|p.T1942Lfs*3|3|0.18|ENSG00000127914|chr7:92062328-92062328|A/-|frameshift_variant;ENSG00000127914|ENST00000356239|AKAP9;ENST00000493453.1_1_7:91570251-91670224:+|nuORF;nc|ENSG00000127914|Q99996-1|AKAP9;nc|ENSG00000127914|Q99996-3|AKAP9;nc|ENSG00000127914|Q99996-4|AKAP9;nc|ENSG00000127914|Q99996-5|AKAP9;nc|ENSG00000127914|Q99996-6|AKAP9	68.78682469695295	0.41700713582915416	4				NaN	NaN	0	NaN	1001	2245	3245
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3249	13.39	NaN	5164.6	30	0	1121.6	0.106	+			17265	HYTIGKEII	9	52	537.3007441026689	1072.5869352721377	2	537.3014526367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HYTIGKEII_	ENSG00000123416|ENST00000336023|TUBA1B;ENSG00000127824|ENST00000248437|TUBA4A;ENSG00000167552|ENST00000301071|TUBA1A;ENSG00000167553|ENST00000301072|TUBA1C;ENST00000462806.5_1_2:220116196-220118580:-|nuORF;ENST00000530835.1_1_11:90015825-90016947:+|nuORF;ENST00000548363.1_1_12:49580068-49582762:-|nuORF;ENST00000550254.1_1_12:49580068-49580335:-|nuORF;nc|ENSG00000127824|P68366-2|TUBA4A;nc|ENSG00000167552|Q71U36-2|TUBA1A;TUBA4A|p.V182Gfs*32|1|0.04|ENSG00000127824|chr2:219251156-219251157|-/TACACCA|frameshift_variant	27.882242232435846	0.5426732730940306	4				NaN	NaN	0	NaN	1002	2245	3245
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3250	13.392	NaN	5557.7	30	0	1293.3	0.106			+	-1	ADRVDQFMS	9	43	542.7414634133563	NaN	0	542.7412719726562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_ADRVDQFM(Oxidation (M))S_	REV__ENSG00000076685|ENST00000404739|NT5C2;REV__ENST00000470228.5_1_10:104858657-104865497:-|nuORF;REV__nc|ENSG00000076685|P49902-2|NT5C2	20.94693142431847	0.3660861156085067	4				NaN	NaN	0	NaN	1003	2245	3245
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3251	13.394	NaN	2884.4	30	0	595.46	0.033	+			24490	LGHGMDRV	8	28	442.7243670128641	NaN	0	442.7242126464844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LGHGMDRV_	ENSG00000099783|ENST00000325495|HNRNPM;nc|ENSG00000099783|P52272-2|HNRNPM	15.63621529709179	1.7418937515398478	4				NaN	NaN	0	NaN	1004	2245	3245
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3252	13.394	NaN	2932.3	30	0	581.31	0.139				-1	 	0	40	494.26027131430686	493.2529948477069	1	494.2601013183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1005	2245	3245
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3266	13.426	NaN	21192	30	0	8463.7	0.214				-1	ECCPGEMRK	9	53	583.7421896983496	1165.4698264634992	2	583.7420654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_EC(Carbamidomethyl (C))C(Carbamidomethyl (C))PGEMRK_	ENST00000265382.7_1_9:71320618-71357449:+|nuORF	26.69291269510374	0.5537881896960711	4				NaN	NaN	0	NaN	1016	2248	3265
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3267	13.429	NaN	10529	30	0	1666.2	0.106				-1	TDSLFMWVGA	10	72	571.7631401949882	1141.5117274567763	2	571.76318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_TDSLFM(Oxidation (M))WVGA_	PSMG4|p.L39M|1|0.16|ENSG00000180822|chr6:3259137-3259137|C/A|missense_variant	47.91560031466742	0.4762067885998563	4				NaN	NaN	0	NaN	1017	2248	3265
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3268	13.431	NaN	13864	30	0	2282	0.106				-1	CCSCNDGPTLG	11	50	620.7234552500242	1239.4323575668484	2	620.7233276367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	3 Carbamidomethyl (C)	_C(Carbamidomethyl (C))C(Carbamidomethyl (C))SC(Carbamidomethyl (C))NDGPTLG_	ENST00000582352.1_1_17:18236273-18236588:-|nuORF	21.68575002086885	0.7623253651248338	4				NaN	NaN	0	NaN	1018	2248	3265
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3269	13.433	NaN	3901.5	30	0	2199.2	0.106	+			3534	ASSRNSKKIP	10	31	363.211879907158	1086.613810321674	3	363.2120056152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASSRNSKKIP_	ENSG00000064692|ENST00000261368|SNCAIP;ENST00000512146.6_1_5:121736783-121799188:+|nuORF;nc|ENSG00000064692|Q9Y6H5-2|SNCAIP;nc|ENSG00000064692|Q9Y6H5-3|SNCAIP;nc|ENSG00000064692|Q9Y6H5-4|SNCAIP;nc|ENSG00000064692|Q9Y6H5-5|SNCAIP	17.364965105453717	0.7282106878714807	4				NaN	NaN	0	NaN	1019	2248	3265
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3270	13.435	NaN	7696.9	30	0	1758.2	0.106			+	-1	RSIFRMAR	8	51	526.793525557386	1051.572498181572	2	527.2492065429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_RSIFRM(Oxidation (M))AR_	REV__ENSG00000206384|ENST00000358511|COL6A6	23.04248740728303	0.7814162927298575	4				NaN	NaN	0	NaN	1020	2248	3265
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3271	13.437	NaN	8315.7	30	0	1849.7	0.038			+	-1	MYNSSHFCY	9	37	604.7288889773424	NaN	0	604.7291870117188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_MYNSSHFC(Carbamidomethyl (C))Y_	REV__ENST00000552189.5_1_12:48437372-48437579:-|nuORF	7.690282842768113	0.40727630907727536	4				NaN	NaN	0	NaN	1021	2248	3265
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3272	13.438	NaN	13442	30	0	1946.9	0.143				-1	 	0	70	633.7994818691504	1265.5844108051008	2	633.7994995117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1022	2248	3265
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3286	13.469	NaN	47542	30	0	6335.9	0.214	+			39668	STIGETSKK	9	91	475.76132154127555	949.5080901493511	2	475.7610778808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STIGETSKK_	ENSG00000100461|ENST00000359890|RBM23;ENST00000554955.5_1_14:23375339-23380602:-|nuORF;ENST00000557667.5_1_14:23373372-23380602:-|nuORF;nc|ENSG00000100461|Q86U06-3|RBM23	134.7655990226056	0.012935733000282069	4				NaN	NaN	0	NaN	1033	2251	3285
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3287	13.473	NaN	48495	30	0	16975	0.106			+	31873	QPWPQFTA	8	50	487.74048988832703	973.4664268434541	2	487.7402038574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QPWPQFTA_	REV__ENST00000555706.5_1_14:100531766-100540844:+|nuORF	26.79610172149135	0.7524337208463756	4				NaN	NaN	0	NaN	1034	2251	3285
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3288	13.475	NaN	15720	30	0	4798.4	0.106			+	10560	EYDEDSLGE	9	37	528.7035286748924	1055.3925044165846	2	528.7030639648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EYDEDSLGE_	REV__ENSG00000272333|ENST00000420124|KMT2B;REV__KMT2B|p.A2538Pfs*76|1|0.42|ENSG00000272333|chr19:35737693-35737693|G/-|frameshift_variant;REV__KMT2B|p.D1589Gfs*89|1|0.28|ENSG00000272333|chr19:35729058-35729059|-/G|frameshift_variant;REV__KMT2B|p.G1879Vfs*16|5|0.4|ENSG00000272333|chr19:35732101-35732101|G/-|frameshift_variant;REV__KMT2B|p.G2123Vfs*30|1|0.34|ENSG00000272333|chr19:35732913-35732913|G/-|frameshift_variant;REV__KMT2B|p.L2136Pfs*17|1|0.27|ENSG00000272333|chr19:35732956-35732956|T/-|frameshift_variant;REV__KMT2B|p.P1821Hfs*74|1|0.36|ENSG00000272333|chr19:35731927-35731927|C/-|frameshift_variant;REV__KMT2B|p.R1911Dfs*23|1|0.18|ENSG00000272333|chr19:35732274-35732274|C/-|frameshift_variant	12.206847966760668	0.6112419832031292	4				NaN	NaN	0	NaN	1035	2251	3285
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3289	13.476	NaN	16678	30	0	2152.4	0.106	+			50227	WPADENGPY	9	58	524.7220207573065	1047.429488581413	2	524.7224731445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_WPADENGPY_	ENST00000565460.1_1_16:68289553-68293557:+|nuORF	17.364965105453717	0.6112419832031293	4				NaN	NaN	0	NaN	1036	2251	3285
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3290	13.478	NaN	9327.7	30	0	2357.7	0.106				-1	ISSCCCACSAN	11	54	559.6911524601331	1117.3677519870662	2	559.6901245117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_ISSC(Carbamidomethyl (C))CCACSAN_	ENST00000559668.5_1_15:84868328-84868472:-|nuORF	17.468008924990375	0.788697330333842	4				NaN	NaN	0	NaN	1037	2251	3285
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3291	13.48	NaN	15304	30	0	4994.9	0.035			+	29497	PDAAHMVQQ	9	52	498.7301120447424	NaN	0	498.730712890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PDAAHMVQQ_	REV__ENSG00000243156|ENST00000441493|MICAL3;REV__MICAL3|p.A1313Lfs*17|1|0.24|ENSG00000243156|chr22:17818727-17818727|G/-|frameshift_variant;REV__MICAL3|p.R1499Gfs*106|7|0.44|ENSG00000243156|chr22:17818166-17818166|G/-|frameshift_variant;REV__MICAL3|p.R1706Afs*24|1|0.3|ENSG00000243156|chr22:17817545-17817545|G/-|frameshift_variant	35.61828744233558	0.29773779453147337	4				NaN	NaN	0	NaN	1038	2251	3285
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3292	13.481	NaN	10445	30	0	2315.5	0.14			+	-1	KKACCCHP	8	43	502.2174758096778	1002.4203986861556	2	502.21722412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C)	_KKAC(Carbamidomethyl (C))C(Carbamidomethyl (C))CHP_	REV__ENST00000360370.8_1_3:125725223-125725439:-|nuORF	28.2542754592877	0.7411748056684583	4				NaN	NaN	0	NaN	1039	2251	3285
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3305	13.51	NaN	12087	30	0	2083.6	0.214				-1	DGCSMTDLSA	10	52	536.7016203613374	NaN	0	536.7013549804688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_DGC(Carbamidomethyl (C))SM(Oxidation (M))TDLSA_	ENSG00000172410|ENST00000304526|INSL5	27.882242232435846	0.4086243523356342	4				NaN	NaN	0	NaN	1049	2254	3304
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3306	13.514	NaN	7955	30	0	2228.3	0.106				-1	QGPFAACHQ	9	53	508.2232024706356	1014.4318520080712	2	508.221923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_QGPFAAC(Carbamidomethyl (C))HQ_	ENSG00000146839|ENST00000613979|ZAN;nc|ENSG00000146839|Q9Y493-2|ZAN;nc|ENSG00000146839|Q9Y493-3|ZAN;nc|ENSG00000146839|Q9Y493-4|ZAN;nc|ENSG00000146839|Q9Y493-5|ZAN;nc|ENSG00000146839|Q9Y493-6|ZAN;nc|ENSG00000146839|Q9Y493-7|ZAN;ZAN|p.E2695Rfs*83|1|0.15|ENSG00000146839|chr7:100794212-100794212|G/-|frameshift_variant;ZAN|p.G2740Efs*38|1|0.09|ENSG00000146839|chr7:100795285-100795285|G/-|frameshift_variant	38.80614096846853	0.43426287593479557	4				NaN	NaN	0	NaN	1050	2254	3304
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3307	13.516	NaN	9501.4	30	0	2900.4	0.106			+	28968	NSGEETDSQQ	10	41	547.7139857057962	NaN	0	547.7139892578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NSGEETDSQQ_	REV__ENSG00000058272|ENST00000450142|PPP1R12A;REV__nc|ENSG00000058272|O14974-2|PPP1R12A;REV__nc|ENSG00000058272|O14974-3|PPP1R12A;REV__nc|ENSG00000058272|O14974-4|PPP1R12A;REV__nc|ENSG00000058272|O14974-5|PPP1R12A	25.57405402267927	0.4162033004763879	4				NaN	NaN	0	NaN	1051	2254	3304
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3308	13.518	NaN	9411.7	30	0	2154.6	0.106			+	-1	RPCCPCCC	8	44	556.6804290335135	1111.346305133827	2	556.6799926757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	4 Carbamidomethyl (C)	_RPC(Carbamidomethyl (C))C(Carbamidomethyl (C))PC(Carbamidomethyl (C))C(Carbamidomethyl (C))C_	REV__ENSG00000163959|ENST00000296327|SLC51A	10.184766708764876	0.7843118145031319	4				NaN	NaN	0	NaN	1052	2254	3304
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3309	13.52	NaN	9637.6	30	0	2117.2	0.106				-1	DSVTTNDCQ	9	53	520.2014413401464	1038.3883297470927	2	520.201416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_DSVTTNDC(Carbamidomethyl (C))Q_	ENSG00000130055|ENST00000374382|GDPD2;nc|ENSG00000130055|Q9HCC8-2|GDPD2;nc|ENSG00000130055|Q9HCC8-3|GDPD2	21.9598887501803	0.5980208138527809	4				NaN	NaN	0	NaN	1053	2254	3304
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3310	13.521	NaN	11030	30	0	2903.2	0.106	+			24185	LEQALVIEEQ	10	48	586.3126587362889	1170.6107645393777	2	586.7031860351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LEQALVIEEQ_	CHD5|p.P1887Rfs*14|1|0.5|ENSG00000116254|chr1:6106698-6106698|G/-|frameshift_variant;ENSG00000111642|ENST00000544040|CHD4;ENSG00000116254|ENST00000262450|CHD5;ENSG00000170004|ENST00000330494|CHD3;ENST00000470531.5_3_17:7807732-7814900:+|nuORF;nc|ENSG00000111642|Q14839-2|CHD4;nc|ENSG00000170004|Q12873-2|CHD3;nc|ENSG00000170004|Q12873-3|CHD3	25.125986553469783	0.6746423231557295	4				NaN	NaN	0	NaN	1054	2254	3304
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3311	13.523	NaN	10805	30	0	2626.4	0.037			+	-1	MQFCCCCG	8	42	569.6665102816903	1137.3184676301805	2	569.666748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	4 Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))QFC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))G_	REV__ENST00000462279.5_1_5:60188520-60189039:-|nuORF	9.47055586587303	0.7831821681235687	4				NaN	NaN	0	NaN	1055	2254	3304
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3324	13.551	NaN	12479	30	0	1442.9	0.211				-1	CRICEAFNPCQ	11	65	670.7812127128175	1339.5478724924349	2	670.780517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_C(Carbamidomethyl (C))RICEAFNPCQ_	chr12:71535186-71544991|118|23.38|0.01|10.97|+|2|TE_info:AluJo,AluJo_dup50904,Alu,SINE,acceptor,+,71544991,71545112|LGR5,None|1	28.081489160057373	0.6952392775027776	4				NaN	NaN	0	NaN	1065	2257	3323
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3325	13.555	NaN	5230.8	30	0	1636.6	0.106	+			29540	PEKQKPKVV	9	55	351.5533913424633	1051.63834462759	3	351.5535583496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PEKQKPKVV_	ENSG00000166152|ENST00000299191|C16orf78	16.473147378115264	0.6112419832031293	4				NaN	NaN	0	NaN	1066	2257	3323
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3326	13.557	NaN	3416.6	30	0	651.16	0.106	+			5347	ATVTPQKAK	9	58	472.28151137916376	942.5484698251275	2	472.2820129394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATVTPQKAK_	ENSG00000102760|ENST00000379359|RGCC;nc|ENSG00000102760|Q9H4X1-2|RGCC	49.44154591367651	0.3095138337212152	4				NaN	NaN	0	NaN	1067	2257	3323
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3327	13.559	NaN	11549	30	0	1850.8	0.106	+			10491	EVSEILDEMSH	11	56	644.7892002111195	1287.5638474890388	2	644.7883911132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EVSEILDEMSH_	ENSG00000116906|ENST00000366647|GNPAT;nc|ENSG00000116906|O15228-2|GNPAT	31.529811441608018	0.6590691889962369	4				NaN	NaN	0	NaN	1068	2257	3323
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3328	13.56	NaN	6497.5	30	0	1146.7	0.106	+			3700	ATAAKPVAAK	10	62	464.28490692562616	926.5552609180523	2	464.28448486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATAAKPVAAK_	COL6A3|p.A2956Lfs*45|1|0.33|ENSG00000163359|chr2:237336234-237336234|C/-|frameshift_variant;COL6A3|p.A2957Lfs*44|1|0.33|ENSG00000163359|chr2:237336232-237336232|A/-|frameshift_variant;COL6A3|p.G3016Vfs*19|1|0.34|ENSG00000163359|chr2:237334810-237334810|G/-|frameshift_variant;ENSG00000163359|ENST00000295550|COL6A3;ENST00000491769.1_1_2:238233419-238250825:-|nuORF;nc|ENSG00000163359|P12111-2|COL6A3;nc|ENSG00000163359|P12111-4|COL6A3	96.66504779109242	0.09291513985748291	4				NaN	NaN	0	NaN	1069	2257	3323
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3329	13.562	NaN	10782	30	0	1819.4	0.106				-1	SCCCYVRCPCC	11	51	648.7099173032378	NaN	0	648.27734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_SC(Carbamidomethyl (C))CCYVRCPCC_	ENSG00000143195|ENST00000271417|ILDR2	14.137123925751023	0.456735970842152	4				NaN	NaN	0	NaN	1070	2257	3323
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3330	13.564	NaN	9186.7	30	0	1592.4	0.039				-1	YHCSASTRLW	10	42	640.793212890625	NaN	0	640.793212890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_YHC(Carbamidomethyl (C))SASTRLW_	KLHDC7A|p.R694H|1|0.27|ENSG00000179023|chr1:18483062-18483062|G/A|missense_variant	19.996771675451527	0.4201028297492154	4				NaN	NaN	0	NaN	1071	2257	3323
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3348	13.601	NaN	9945.8	30	0	2724.9	0.214			+	21951	KSAMWGSPRP	10	61	566.7842406796362	NaN	0	566.7841186523438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_KSAM(Oxidation (M))WGSPRP_	REV__ENST00000496953.1_1_3:60676058-60676130:-|nuORF	85.16082228582465	0.07406536248925066	4				NaN	NaN	0	NaN	1086	2260	3347
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3349	13.605	NaN	9502.2	30	0	2033.4	0.106	+			9861	EQDNDFLIY	9	42	578.7636108398438	NaN	0	578.7636108398438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EQDNDFLIY_	ENSG00000185518|ENST00000394232|SV2B;nc|ENSG00000185518|Q7L1I2-2|SV2B;SV2B|p.G586Wfs*4|2|0.27|ENSG00000185518|chr15:91289561-91289562|-/T|frameshift_variant	30.503639358989545	0.3235605894931338	4				NaN	NaN	0	NaN	1087	2260	3347
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3350	13.607	NaN	8066.8	30	0	1955.7	0.106	+			20700	KGQESFKKQE	10	64	604.8176879882812	NaN	0	604.8176879882812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KGQESFKKQE_	ENSG00000181163|ENST00000296930|NPM1;ENST00000521088.1_1_8:62115470-62115605:+|nuORF;nc|ENSG00000181163|P06748-2|NPM1;nc|ENSG00000181163|P06748-3|NPM1	53.08895987439943	0.2860736266326207	4				NaN	NaN	0	NaN	1088	2260	3347
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3351	13.609	NaN	4657.3	30	0	1540.8	0.106	+			31964	QQTDCEKK	8	49	490.22750982425174	NaN	0	490.2251892089844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QQTDCEKK_	ZNF652|p.N298Kfs*8|1|0.27|ENSG00000198740|chr17:49316832-49316833|-/T|frameshift_variant	39.252832667884924	1.7418937515398478	4				NaN	NaN	0	NaN	1089	2260	3347
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3352	13.611	NaN	2871.5	30	0	782.46	0.106	+			21578	KPGEPLGEDG	10	35	499.74083680722316	NaN	0	499.28436279296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KPGEPLGEDG_	ENST00000258443.6_2_2:109546654-109605500:-|nuORF	19.1035232394073	0.4201028297492154	4				NaN	NaN	0	NaN	1090	2260	3347
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3353	13.612	NaN	6495.9	30	0	1580	0.036			+	48945	VVEKVMGVSL	10	60	538.806151620095	NaN	0	538.8060302734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_VVEKVM(Oxidation (M))GVSL_	REV__ENSG00000119508|ENST00000395097|NR4A3;REV__nc|ENSG00000119508|Q92570-2|NR4A3;REV__nc|ENSG00000119508|Q92570-3|NR4A3;REV__NR4A3|p.R554Efs*13|1|0.12|ENSG00000119508|chr9:99863646-99863646|A/-|frameshift_variant	56.72105179125745	0.2610545891966633	4				NaN	NaN	0	NaN	1091	2260	3347
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3354	13.613	NaN	5796.7	30	0	1172.5	0.141	+			12046	FYSEFKMF	8	44	549.7508045702157	1097.4870562072313	2	549.7921752929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FYSEFKMF_	ENST00000462992.1_1_1:171292253-171302174:+|nuORF	19.359975847455235	0.7988239741663654	4				NaN	NaN	0	NaN	1092	2260	3347
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3369	13.646	NaN	6010.2	30	0	561.63	0.214			+	24398	LGAATPRRT	9	64	471.77712492816073	NaN	0	471.77716064453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LGAATPRRT_	REV__CDK13|p.A162Pfs*174|1|0.41|ENSG00000065883|chr7:39951118-39951118|G/-|frameshift_variant	71.29570347882199	0.10120983364817086	4				NaN	NaN	0	NaN	1104	2263	3368
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3370	13.65	NaN	2953.7	30	0	1077.5	0.106				-1	MDAVLRHG	8	26	457.72971813195517	913.4448833307104	2	457.72955322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_M(Oxidation (M))DAVLRHG_	ENSG00000065802|ENST00000264607|ASB1	12.959181472943097	0.7887000251064199	4				NaN	NaN	0	NaN	1105	2263	3368
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3371	13.652	NaN	2448.8	30	0	501.8	0.106	+			22500	KTPEPGAQQ	9	42	478.24602466715135	954.4774964011027	2	478.24566650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KTPEPGAQQ_	ENSG00000175213|ENST00000311764|ZNF408	51.52775601994872	0.28504342437107444	4				NaN	NaN	0	NaN	1106	2263	3368
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3372	13.654	NaN	3699	30	0	302.16	0.106			+	-1	MGKCYWFCCFC	11	57	817.7883014667404	1633.5620500002808	2	817.787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	4 Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))GKC(Carbamidomethyl (C))YWFC(Carbamidomethyl (C))C(Carbamidomethyl (C))FC(Carbamidomethyl (C))_	REV__ENST00000555736.1_1_14:65714419-65769374:-|nuORF	5.55782384252955	0.84446477687463	4				NaN	NaN	0	NaN	1107	2263	3368
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3373	13.656	NaN	5783.6	30	0	843.8	0.106				-1	FTSTFQEMQE	10	46	632.2644116058578	NaN	0	632.2647705078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_FTSTFQEM(Oxidation (M))QE_	ENSG00000100884|ENST00000689861|CPNE6;ENST00000558995.5_1_14:24543475-24546936:+|nuORF;nc|ENSG00000100884|O95741-2|CPNE6	44.377184641726394	0.34115073642966565	4				NaN	NaN	0	NaN	1108	2263	3368
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3374	13.657	NaN	4091.8	30	0	376.93	0.041				-1	EEWCIEMAEMC	11	48	736.7603258082711	NaN	0	736.7611083984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))EEWC(Carbamidomethyl (C))IEMAEMC_	USP48|p.R458C|1|0.48|ENSG00000090686|chr1:21728648-21728648|G/A|missense_variant	14.137123925751023	0.456735970842152	4				NaN	NaN	0	NaN	1109	2263	3368
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3375	13.658	NaN	4962.9	30	0	705.11	0.144			+	26137	LSPTFLCVGH	10	63	537.2775077647354	NaN	0	537.2765502929688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSPTFLCVGH_	REV__NUP205|p.A1778G|1|0.3|ENSG00000155561|chr7:135638624-135638624|C/G|missense_variant	54.722347961057174	0.27574710963839943	4				NaN	NaN	0	NaN	1110	2263	3368
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3393	13.697	NaN	9795.6	30	0	1508.9	0.214	+			42604	TATAVAHCK	9	66	479.7422751782714	957.4699974233429	2	479.74212646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_TATAVAHC(Carbamidomethyl (C))K_	chr19:39435705-39435848|468|276.17|0.0|24.72|-|0|RPS16,RPS16|1;ENSG00000105193|ENST00000251453|RPS16;ENST00000601390.1_1_19:39926180-39926535:-|nuORF	101.25262130126117	0.03792372629710479	4				NaN	NaN	0	NaN	1125	2266	3392
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3394	13.701	NaN	18557	30	0	2693.4	0.106	+			6425	AVVSGVHKK	9	67	462.7850640422031	923.5555751512062	2	462.7846984863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVVSGVHKK_	ACTR3B-JMJD1C|1|fusion;ENSG00000171988|ENST00000399262|JMJD1C;nc|ENSG00000171988|Q15652-3|JMJD1C	113.41158876095287	0.025516849225023126	4				NaN	NaN	0	NaN	1126	2266	3392
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3395	13.703	NaN	26225	30	0	3156.1	0.106	+			5383	ATYETKESK	9	77	528.7642219824254	1055.5138910316507	2	528.7640380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATYETKESK_	ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65623404-65625570:-|nuORF;nc|ENSG00000165410|Q9Y281-3|CFL2	114.8945686534367	0.024290463251177924	4				NaN	NaN	0	NaN	1127	2266	3392
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3396	13.705	NaN	20728	30	0	7823.9	0.106	+			38127	SPWTSCKSGA	10	45	540.7432817783488	1079.4720106234975	2	540.7434692382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_SPWTSC(Carbamidomethyl (C))KSGA_	CON__Q6IFU6;ENSG00000196859|ENST00000355612|KRT39	41.42661286455405	0.5359995577334734	4				NaN	NaN	0	NaN	1128	2266	3392
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3397	13.707	NaN	54807	30	0	5527.8	0.106	+			41468	SVNQGQNIHRK	11	98	640.8446936522672	1279.6748343713343	2	640.8444213867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVNQGQNIHRK_	CFTR|p.E1044Dfs*20|1|0.04|ENSG00000001626|chr7:117610661-117610662|-/TCAAAGAAAAC|frameshift_variant;CFTR|p.G1208Afs*3|1|0.3|ENSG00000001626|chr7:117627672-117627672|G/-|frameshift_variant;CFTR|p.L1258Ffs*7|1|0.26|ENSG00000001626|chr7:117642487-117642488|-/T|frameshift_variant;CFTR|p.S1297Lfs*31|1|0.28|ENSG00000001626|chr7:117652852-117652852|T/-|frameshift_variant;ENSG00000001626|ENST00000003084|CFTR;nc|ENSG00000001626|P13569-2|CFTR	124.38517954306293	0.01175141158139803	4				NaN	NaN	0	NaN	1129	2266	3392
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3398	13.709	NaN	12364	30	0	3741	0.037			+	-1	PTSDCKSECQ	10	50	577.724898177611	1153.4352434220218	2	577.7244262695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_PTSDC(Carbamidomethyl (C))KSECQ_	REV__ADAMTS6|p.I1077Ffs*10|1|0.37|ENSG00000049192|chr5:65170633-65170633|G/-|frameshift_variant;REV__ENSG00000049192|ENST00000381055|ADAMTS6;REV__ENST00000314351.9_1_5:64447665-64494460:-|nuORF	25.57405402267927	0.6709832231498071	4				NaN	NaN	0	NaN	1130	2266	3392
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3399	13.709	NaN	17969	30	0	2170.7	0.143			+	-1	NLCNDCEQNC	10	48	606.7062375659333	1211.3979221986665	2	606.70654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_NLCNDC(Carbamidomethyl (C))EQNC_	REV__ENSG00000179002|ENST00000375371|TAS1R2;REV__TAS1R2|p.L471Cfs*5|1|0.37|ENSG00000179002|chr1:18849397-18849397|G/-|frameshift_variant;REV__TAS1R2|p.N527Kfs*4|1|0.08|ENSG00000179002|chr1:18841739-18841740|-/T|frameshift_variant	13.45404412870281	0.7480832915596971	4				NaN	NaN	0	NaN	1131	2266	3392
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3414	13.742	NaN	192210	30	0	36279	0.156	+			15767	GVSTVQKAK	9	103	459.2744346720602	916.5343164109204	2	459.27410888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVSTVQKAK_	ENSG00000160818|ENST00000368232|GPATCH4;nc|ENSG00000160818|Q5T3I0-3|GPATCH4	136.26810882979174	0.012230845423532208	4				NaN	NaN	0	NaN	1143	2269	3413
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3415	13.745	NaN	16934	30	0	3004.4	0.106	+			20068	KEKEQAKQL	9	76	551.3169717538884	1100.6193905745768	2	551.3170776367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEKEQAKQL_	ENSG00000110844|ENST00000548825|PRPF40B;ENSG00000196504|ENST00000545856|PRPF40A;nc|ENSG00000110844|Q6NWY9-2|PRPF40B;nc|ENSG00000110844|Q6NWY9-3|PRPF40B;nc|ENSG00000110844|Q6NWY9|PRPF40B;nc|ENSG00000196504|O75400-2|PRPF40A;nc|ENSG00000196504|O75400-3|PRPF40A;nc|ENSG00000196504|O75400|PRPF40A	142.36107225718385	0.009372392051035914	4				NaN	NaN	0	NaN	1144	2269	3413
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3416	13.747	NaN	31804	30	0	13358	0.106				-1	 	0	54	471.25368770702613	940.4928224808523	2	471.2533264160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1145	2269	3413
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3417	13.749	NaN	8929.2	30	0	1317.7	0.106			+	40391	STVAGAKK	8	68	381.22920895361193	760.4438649740239	2	381.22943115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STVAGAKK_	REV__ENSG00000111110|ENST00000228705|PPM1H;REV__PPM1H|p.T227Hfs*30|2|0.16|ENSG00000111110|chr12:62801894-62801894|G/-|frameshift_variant	71.29570347882199	0.39610197767395533	4				NaN	NaN	0	NaN	1146	2269	3413
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3418	13.751	NaN	11215	30	0	1959.7	0.106	+			49973	WAELLSGCH	9	52	508.2351800550892	1014.4558071769784	2	508.23516845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_WAELLSGCH_	ENSG00000174776|ENST00000682715|WDR49;WDR49|p.K607Nfs*9|2|0.38|ENSG00000174776|chr3:167505314-167505314|T/-|frameshift_variant	31.954861631926434	0.5046124803899898	4				NaN	NaN	0	NaN	1147	2269	3413
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3419	13.753	NaN	2429.1	30	0	964.64	0.106	+			24908	LKNNQTGLTL	10	43	367.880152612044	1100.618628436332	3	367.8802490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LKNNQTGLTL_	tr|U7SKT2|U7SKT2_FUSNUDNAligaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=ligAPE=3SV=1	21.68575002086885	0.7027366847906487	4				NaN	NaN	0	NaN	1148	2269	3413
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3420	13.754	NaN	11579	30	0	2137.1	0.035	+			7359	DDDYDDPE	8	57	492.1589384008906	982.3033238685812	2	492.1592102050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DDDYDDPE_	CLNK|p.N282Ifs*43|1|0.17|ENSG00000109684|chr4:10513525-10513525|T/-|frameshift_variant;ENSG00000109684|ENST00000226951|CLNK;nc|ENSG00000109684|Q7Z7G1-2|CLNK;nc|ENSG00000109684|Q7Z7G1-3|CLNK	13.775330524044264	0.789990904165365	4				NaN	NaN	0	NaN	1149	2269	3413
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3435	13.786	NaN	3539.5	30	0	931.01	0.214			+	45954	VASPCNEE	8	48	424.67718126742926	847.3398096016585	2	424.6773681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VASPCNEE_	REV__ENSG00000134569|ENST00000378623|LRP4;REV__LRP4|p.C191Afs*206|1|0.17|ENSG00000134569|chr11:46899010-46899010|G/-|frameshift_variant	42.47446043378293	0.6409579893742323	4				NaN	NaN	0	NaN	1161	2272	3434
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3436	13.789	NaN	11951	30	0	1908.4	0.106	+			5826	AVIGNNKQK	9	66	486.2853332369079	970.5561135406158	2	486.284912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVIGNNKQK_	ENSG00000114098|ENST00000469044|ARMC8;ENST00000463485.5_1_3:137940771-137947769:+|nuORF;nc|ENSG00000114098|Q8IUR7-2|ARMC8;nc|ENSG00000114098|Q8IUR7-3|ARMC8;nc|ENSG00000114098|Q8IUR7-6|ARMC8;nc|ENSG00000114098|Q8IUR7-7|ARMC8;nc|ENSG00000114098|Q8IUR7-8|ARMC8	128.8611167810002	0.015835461597062447	4				NaN	NaN	0	NaN	1162	2272	3434
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3437	13.792	NaN	7514	30	0	2202.1	0.106			+	-1	GLCCSGAGSG	10	56	463.1776942886268	924.3408356440536	2	463.1766662597656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_GLC(Carbamidomethyl (C))C(Carbamidomethyl (C))SGAGSG_	REV__ENSG00000157680|ENST00000614521|DGKI;REV__nc|ENSG00000157680|O75912|DGKI	37.15910966729921	0.575322462179216	4				NaN	NaN	0	NaN	1163	2272	3434
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3438	13.793	NaN	5090.5	30	0	1608.7	0.106				-1	GDHMHPYG	8	24	465.18087226098737	928.3471915887748	2	465.6400451660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_GDHM(Oxidation (M))HPYG_	ENSG00000162761|ENST00000342310|LMX1A;LMX1A|p.S344Kfs*5|1|0.06|ENSG00000162761|chr1:165204000-165204001|-/TTTT|frameshift_variant;nc|ENSG00000162761|Q8TE12-2|LMX1A	8.822329726475273	0.7821568878176242	4				NaN	NaN	0	NaN	1164	2272	3434
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3439	13.795	NaN	7978	30	0	1700.6	0.106	+			7006	CRQGLPFAAW	10	58	574.788714160333	NaN	0	574.788818359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_CRQGLPFAAW_	ENSG00000177380|ENST00000334186|PPFIA3;nc|ENSG00000177380|O75145-2|PPFIA3;PPFIA3|p.A828S|1|0.75|ENSG00000177380|chr19:49142053-49142053|G/T|missense_variant;PPFIA3|p.A911Rfs*78|1|0.2|ENSG00000177380|chr19:49142984-49142985|-/C|frameshift_variant	30.503639358989545	0.4000169810673414	4				NaN	NaN	0	NaN	1165	2272	3434
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3440	13.797	NaN	9341.6	30	0	1830.7	0.037			+	-1	ENITMIAMFS	10	53	586.7673891278611	1171.520225322522	2	586.767333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_ENITM(Oxidation (M))IAMFS_	REV__TMC1|p.T228Pfs*42|1|0.41|ENSG00000165091|chr9:72754822-72754822|A/-|frameshift_variant	30.317721548370564	0.6322445173429027	4				NaN	NaN	0	NaN	1166	2272	3434
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3441	13.798	NaN	2820.8	30	0	610.41	0.141				-1	EAMTYDEA	8	36	473.1771480201381	NaN	0	473.6380310058594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_EAM(Oxidation (M))TYDEA_	ENSG00000007908|ENST00000333360|SELE;SELE|p.A38V|1|0.17|ENSG00000007908|chr1:169732923-169732923|G/A|missense_variant;SELE|p.T415Qfs*14|1|0.31|ENSG00000007908|chr1:169728095-169728095|G/-|frameshift_variant	20.481830146152948	1.741893751539848	4				NaN	NaN	0	NaN	1167	2272	3434
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3458	13.833	NaN	13274	30	0	1692.7	0.214	+			3910	ATARPRPVK	9	62	332.5415739036716	994.6028923112148	3	332.5417175292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATARPRPVK_	ENSG00000170892|ENST00000396388|TSEN34	54.776311868738084	0.25715957988447635	4				NaN	NaN	0	NaN	1181	2275	3457
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3459	13.837	NaN	19624	30	0	7240.5	0.106	+			32277	QTMAANAQKNK	11	73	602.8087900578354	NaN	0	602.8087768554688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QTMAANAQKNK_	ENSG00000162368|ENST00000371873|CMPK1;ENST00000371870.3_1_1:47799617-47838812:+|nuORF;nc|ENSG00000162368|P30085-2|CMPK1;nc|ENSG00000162368|P30085|CMPK1	145.15565482312357	1.937010355604807E-05	4				NaN	NaN	0	NaN	1182	2275	3457
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3460	13.839	NaN	20487	30	0	2680.3	0.106			+	43870	TMGKLVQPLMV	11	85	624.838337143367	1247.6621213535338	2	624.83837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Oxidation (M)	_TM(Oxidation (M))GKLVQPLM(Oxidation (M))V_	REV__ENSG00000116062|ENST00000234420|MSH6;REV__MSH6|p.F882Lfs*24|1|0.31|ENSG00000116062|chr2:47800626-47800626|T/-|frameshift_variant;REV__MSH6|p.G1105Wfs*3|2|0.25|ENSG00000116062|chr2:47803552-47803553|-/T|frameshift_variant;REV__nc|ENSG00000116062|P52701-2|MSH6;REV__nc|ENSG00000116062|P52701-3|MSH6;REV__nc|ENSG00000116062|P52701-4|MSH6	56.43379154798735	0.3552884390983883	4				NaN	NaN	0	NaN	1183	2275	3457
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3461	13.841	NaN	7226.1	30	0	1603	0.106	+			47904	VSLMGFPLR	9	49	510.2880859375	NaN	0	510.2880859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSLMGFPLR_	chr15:53523322-53540662|232|17.27|0.17|6.68|-|0|TE_info:L1PA2,L1PA2_dup4399,L1,LINE,donor,+,53540662,53546677|WDR72,None|84;L1PA3_dup1321|chr2:173527290-173533317:-|1.892281258594111|0.2637255971055219|2.84|482.0|347|3|anti-sense	27.882242232435846	0.3367954786602879	4				NaN	NaN	0	NaN	1184	2275	3457
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3462	13.843	NaN	10471	30	0	2103.2	0.106			+	8094	DWSLRQHW	8	53	564.2723388671875	NaN	0	564.2723388671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DWSLRQHW_	REV__ENST00000603864.5_1_12:51663146-51663326:-|nuORF	26.69291269510374	1.7418937515398478	4				NaN	NaN	0	NaN	1185	2275	3457
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3463	13.845	NaN	12160	30	0	1710.8	0.035	+			41649	SVQTKTIKK	9	74	516.8243431647045	1031.6341333962089	2	516.823974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVQTKTIKK_	ENSG00000069869|ENST00000435532|NEDD4;ENST00000513957.1_1_15:56216842-56258681:-|nuORF	126.24258497203832	0.01742065577488747	4				NaN	NaN	0	NaN	1186	2275	3457
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3464	13.845	NaN	5595.4	30	0	1111.5	0.141	+			27071	MAGHDQFQQ	9	41	531.2275724083183	NaN	0	530.770263671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MAGHDQFQQ_	CREBBP|p.G2229D|1|0.35|ENSG00000005339|chr16:3728361-3728361|C/T|missense_variant	23.04248740728303	0.3589936788096251	4				NaN	NaN	0	NaN	1187	2275	3457
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3481	13.882	NaN	11278	30	0	3228	0.214	+			3368	ASNPVIKKK	9	71	492.8138365376546	983.6131201421092	2	492.81353759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASNPVIKKK_	nc|ENSG00000117650|P51955-4|NEK2	101.25262130126117	0.03792372629710479	4				NaN	NaN	0	NaN	1201	2278	3480
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3482	13.886	NaN	4136.1	30	0	895.18	0.106	+			44157	TQNLAQKK	8	45	465.771728515625	NaN	0	465.771728515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TQNLAQKK_	ENSG00000168899|ENST00000306384|VAMP5	38.80614096846853	1.7418937515398478	4				NaN	NaN	0	NaN	1202	2278	3480
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3483	13.888	NaN	9283.4	30	0	2485.7	0.106			+	-1	KGAEFMTTAL	10	57	542.7733264330782	NaN	0	542.7731323242188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_KGAEFM(Oxidation (M))TTAL_	REV__ENSG00000137960|ENST00000370759|GIPC2	39.252832667884924	0.37128895876774715	4				NaN	NaN	0	NaN	1203	2278	3480
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3484	13.89	NaN	6580.9	30	0	1330.9	0.106				-1	AVCNTPHEK	9	52	528.2511052821656	NaN	0	528.2689819335938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_AVC(Carbamidomethyl (C))NTPHEK_	ENST00000467117.5_1_7:123191621-123197849:-|nuORF	24.519189625965996	0.35377483217337163	4				NaN	NaN	0	NaN	1204	2278	3480
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3485	13.891	NaN	7316.1	30	0	1537.6	0.106			+	-1	NSPSETRCP	9	49	524.2311401367188	NaN	0	524.2311401367188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_NSPSETRC(Carbamidomethyl (C))P_	REV__ENSG00000130997|ENST00000511885|POLN	15.641811463095205	0.38404136392510424	4				NaN	NaN	0	NaN	1205	2278	3480
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3486	13.893	NaN	6865.1	30	0	1594.3	0.036			+	10092	ESLALECTTP	10	39	532.2504272460938	NaN	0	532.2504272460938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ESLALECTTP_	REV__ENSG00000204524|ENST00000414468|ZNF805;REV__ZNF805|p.W109Lfs*51|1|0.25|ENSG00000204524|chr19:57253139-57253140|-/T|frameshift_variant	25.57405402267927	0.4162033004763879	4				NaN	NaN	0	NaN	1206	2278	3480
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3487	13.894	NaN	8750.7	30	0	1676.3	0.14				-1	GTGCSPDNGGC	11	58	512.6777278775082	NaN	0	512.6777954101562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_GTGCSPDNGGC(Carbamidomethyl (C))_	CD248|p.E673Gfs*12|1|0.27|ENSG00000174807|chr11:66315010-66315011|-/C|frameshift_variant;ENSG00000174807|ENST00000311330|CD248	16.71738777980365	0.456735970842152	4				NaN	NaN	0	NaN	1207	2278	3480
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3505	13.933	NaN	8457.4	30	0	1970.9	0.214			+	-1	MYLPSKKQ	8	53	505.76987767670636	1009.5252024202127	2	505.7696533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))YLPSKKQ_	REV__ENSG00000162571|ENST00000379289|TTLL10;REV__nc|ENSG00000162571|Q6ZVT0-2|TTLL10;REV__nc|ENSG00000162571|Q6ZVT0-3|TTLL10	29.14955571784316	0.7342621283720113	4				NaN	NaN	0	NaN	1222	2281	3504
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3506	13.937	NaN	11620	30	0	2884.2	0.106				-1	QVHTCFGVY	9	54	555.7545744134741	NaN	0	555.7545776367188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_QVHTC(Carbamidomethyl (C))FGVY_	nc|ENSG00000176697|P23560-4|BDNF	35.61828744233558	0.29773779453147337	4				NaN	NaN	0	NaN	1223	2281	3504
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3507	13.939	NaN	2591.8	30	0	534.08	0.106				-1	PRCAQVERA	9	45	362.85251615402024	NaN	0	362.8524475097656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_PRC(Carbamidomethyl (C))AQVERA_	ENSG00000144152|ENST00000331203|FBLN7;FBLN7|p.Q283Rfs*26|2|0.15|ENSG00000144152|chr2:112185235-112185235|C/-|frameshift_variant;nc|ENSG00000144152|Q53RD9-3|FBLN7	30.317721548370564	0.32449924987115025	4				NaN	NaN	0	NaN	1224	2281	3504
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3508	13.94	NaN	3875	30	0	1025.2	0.106	+			31322	QIPRNVLE	8	39	484.7794494628906	NaN	0	484.7794494628906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QIPRNVLE_	ENSG00000184014|ENST00000328194|DENND5A;nc|ENSG00000184014|Q6IQ26-2|DENND5A	24.20275056022122	1.7418937515398478	4				NaN	NaN	0	NaN	1225	2281	3504
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3509	13.942	NaN	10670	30	0	2763	0.106			+	6282	AVSSSAFILCV	11	64	577.2987060546875	NaN	0	577.2987060546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_AVSSSAFILC(Carbamidomethyl (C))V_	REV__ENST00000520931.5_2_5:150409762-150409912:-|nuORF	42.396135135203025	0.3699325281549567	4				NaN	NaN	0	NaN	1226	2281	3504
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3510	13.944	NaN	9470.4	30	0	2184.2	0.037			+	29428	PCEGFFFFF	9	43	570.7470208588825	NaN	0	570.7470092773438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PCEGFFFFF_	REV__ENST00000239446.5_1_5:140572114-140572231:+|nuORF	20.94693142431847	0.3660861156085067	4				NaN	NaN	0	NaN	1227	2281	3504
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3511	13.945	NaN	5306.7	30	0	1245.2	0.14	+			17730	IENQRLQK	8	44	514.7964274897732	1027.5783020463464	2	515.7731323242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IENQRLQK_	CCDC88A|p.I779Sfs*4|1|0.29|ENSG00000115355|chr2:55334486-55334486|T/-|frameshift_variant;CCDC88A|p.L1472Ffs*8|1|0.35|ENSG00000115355|chr2:55303124-55303125|-/A|frameshift_variant;CCDC88A|p.N1003Kfs*3|1|0.32|ENSG00000115355|chr2:55322681-55322682|-/T|frameshift_variant;ENSG00000115355|ENST00000436346|CCDC88A;nc|ENSG00000115355|Q3V6T2-2|CCDC88A;nc|ENSG00000115355|Q3V6T2-3|CCDC88A;nc|ENSG00000115355|Q3V6T2-4|CCDC88A;nc|ENSG00000115355|Q3V6T2-5|CCDC88A	25.450171626174864	0.7628259754767981	4				NaN	NaN	0	NaN	1228	2281	3504
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3529	13.984	NaN	17268	30	0	7476.1	0.214				-1	 	0	64	519.1374068968506	518.1301304302506	1	521.2855834960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1243	2284	3528
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3530	13.987	NaN	12597	30	0	2377.5	0.106	+			1784	AIDPTRKQK	9	69	528.811984744033	1055.609416554866	2	528.8121337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AIDPTRKQK_	ATAD1|p.N66Mfs*2|1|0.25|ENSG00000138138|chr10:87792721-87792721|T/-|frameshift_variant;ATAD1|p.V49*|1|0.28|ENSG00000138138|chr10:87814456-87814456|T/-|frameshift_variant;ENSG00000138138|ENST00000680024|ATAD1;nc|ENSG00000138138|Q8NBU5-2|ATAD1	93.19546047674547	0.05585629608842056	4				NaN	NaN	0	NaN	1244	2284	3528
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3531	13.99	NaN	5543.6	30	0	1262.3	0.106	+			15175	GTSGPHVGK	9	61	420.2218427032494	838.4291324732989	2	420.22198486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTSGPHVGK_	ENSG00000111859|ENST00000379446|NEDD9;ENST00000448183.6_1_6:11200558-11306280:-|nuORF;nc|ENSG00000111859|Q14511-2|NEDD9;nc|ENSG00000111859|Q14511-3|NEDD9;NEDD9|p.P245Lfs*3|2|0.37|ENSG00000111859|chr6:11191135-11191135|G/-|frameshift_variant	54.776311868738084	0.25715957988447635	4				NaN	NaN	0	NaN	1245	2284	3528
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3532	13.991	NaN	12442	30	0	2567.8	0.106			+	-1	NGCIQTQICS	10	59	562.2479807256876	NaN	0	562.2489013671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_NGCIQTQIC(Carbamidomethyl (C))S_	REV__ENST00000381793.6_1_4:40425923-40425971:-|nuORF	35.15202426646627	0.38475398474706135	4				NaN	NaN	0	NaN	1246	2284	3528
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3533	13.993	NaN	11577	30	0	2458.3	0.106				-1	MGDHSMHFLP	10	57	594.250142471482	NaN	0	594.2940673828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_M(Oxidation (M))GDHSMHFLP_	ENST00000360694.7_1_6:35378793-35389621:+|nuORF;ENST00000418635.6_1_6:35378793-35391776:+|nuORF	21.9598887501803	0.4201028297492154	4				NaN	NaN	0	NaN	1247	2284	3528
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3534	13.995	NaN	7623.5	30	0	1658.9	0.036			+	9979	ERHMARSPS	9	56	535.7619422907323	1069.5093316482646	2	535.762451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ERHMARSPS_	REV__ENST00000577399.5_1_17:37558585-37558747:-|nuORF	30.317721548370564	0.5199124245378496	4				NaN	NaN	0	NaN	1248	2284	3528
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3535	13.996	NaN	12030	30	0	1982.3	0.144			+	-1	AELGKTCIRDR	11	43	659.8483276367188	NaN	0	659.8483276367188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_AELGKTC(Carbamidomethyl (C))IRDR_	REV__ENSG00000180336|ENST00000409122|MEIOC;REV__nc|ENSG00000180336|A2RUB1-1|MEIOC;REV__nc|ENSG00000180336|A2RUB1-2|MEIOC;REV__nc|ENSG00000180336|A2RUB1-5|MEIOC	16.006774744331256	0.456735970842152	4				NaN	NaN	0	NaN	1249	2284	3528
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3553	14.034	NaN	6367.8	30	0	838.57	0.214	+			16463	HETEQKRL	8	68	347.52086969109433	NaN	0	347.5208740234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HETEQKRL_	ENSG00000139644|ENST00000267115|TMBIM6;ENST00000553022.1_1_12:50146843-50152319:+|nuORF;nc|ENSG00000139644|P55061-2|TMBIM6	55.50420428727701	1.7418937515398478	4				NaN	NaN	0	NaN	1264	2287	3552
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3554	14.038	NaN	5411.9	30	0	868.35	0.106	+			4118	ATEDSQRYK	9	69	549.2646226944349	1096.5146924556698	2	549.2652587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATEDSQRYK_	ENSG00000119801|ENST00000261353|YPEL5	51.19269402634007	0.2889735674168909	4				NaN	NaN	0	NaN	1265	2287	3552
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3555	14.04	NaN	2773.1	30	0	449.22	0.106	+			13469	GLLDFMKK	8	48	484.2694091796875	NaN	0	484.2694091796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_GLLDFM(Oxidation (M))KK_	tr|U7SYX3|U7SYX3_FUSNURibosomal-protein-alanineN-acetyltransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00792PE=4SV=1	65.80317337860623	1.7418937515398478	4				NaN	NaN	0	NaN	1266	2287	3552
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3556	14.042	NaN	7780.1	30	0	1810.5	0.106				-1	 	0	33	432.2008705974927	862.3871882617855	2	432.2010803222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1267	2287	3552
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3557	14.044	NaN	2596.5	30	0	534.02	0.106	+			30372	PVLACHLLG	9	49	461.764059425137	921.5135659170741	2	461.76348876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PVLACHLLG_	ENST00000262676.9_2_1:51787456-51796919:-|nuORF	21.70233525837049	0.6004277881119521	4				NaN	NaN	0	NaN	1268	2287	3552
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3558	14.045	NaN	5904.2	30	0	1945	0.035	+			27074	MAHLLIHTG	9	65	331.5173912203064	991.5303442611194	3	331.5176086425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MAHLLIHTG_	ENSG00000167554|ENST00000403906|ZNF610;nc|ENSG00000167554|Q8N9Z0-2|ZNF610	26.79610172149135	0.5528238334041078	4				NaN	NaN	0	NaN	1269	2287	3552
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3559	14.046	NaN	12543	30	0	4997.1	0.143			+	30402	PVSSAQYENEK	11	67	626.295834704502	1250.577116475804	2	626.2957763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PVSSAQYENEK_	REV__ENSG00000103313|ENST00000219596|MEFV;REV__nc|ENSG00000103313|O15553-1|MEFV	37.59989570853033	0.5907838038483115	4				NaN	NaN	0	NaN	1270	2287	3552
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3576	14.083	NaN	6627.7	30	0	769.06	0.214	+			49219	VVNDAGRPK	9	67	478.26935298304426	NaN	0	478.2694396972656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVNDAGRPK_	ENSG00000109971|ENST00000534624|HSPA8;ENST00000508840.1_1_8:30095113-30095479:+|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;HSPA8|p.K569Dfs*6|1|0.3|ENSG00000109971|chr11:123058302-123058303|TC/-|frameshift_variant;nc|ENSG00000109971|P11142-2|HSPA8	90.60085204095205	0.040385177724871185	4				NaN	NaN	0	NaN	1284	2290	3575
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3577	14.086	NaN	6384.1	30	0	1252	0.106	+			31069	QFANLIKHK	9	69	549.8262916506561	1097.6380303681121	2	549.8265991210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QFANLIKHK_	ENST00000436625.1_1_7:63930096-63930567:+|nuORF	52.936696900407355	0.27249468807391813	4				NaN	NaN	0	NaN	1285	2290	3575
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3578	14.089	NaN	4933.1	30	0	998.81	0.106	+			9035	EGENRIEVL	9	58	529.7753295898438	NaN	0	529.7753295898438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EGENRIEVL_	ENSG00000135362|ENST00000530639|PRR5L;ENST00000389693.3_1_11:36397601-36484283:+|nuORF;nc|ENSG00000135362|Q6MZQ0-3|PRR5L;nc|ENSG00000135362|Q6MZQ0-4|PRR5L	39.252832667884924	0.27938773122138094	4				NaN	NaN	0	NaN	1286	2290	3575
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3579	14.09	NaN	4493.6	30	0	1107.2	0.106			+	1765	AIAPIEPCH	9	39	475.74120121277804	949.4678494923561	2	475.7410888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AIAPIEPCH_	REV__ENSG00000102195|ENST00000218316|GPR50	20.481830146152948	0.6112419832031293	4				NaN	NaN	0	NaN	1287	2290	3575
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3580	14.092	NaN	6324.5	30	0	1481.4	0.106				-1	GTQIHKVCK	9	55	535.7924630092373	1069.5703730852745	2	536.7509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_GTQIHKVC(Carbamidomethyl (C))K_	ENST00000594085.5_1_19:40854624-40871501:+|nuORF	26.69291269510374	0.5537881896960711	4				NaN	NaN	0	NaN	1288	2290	3575
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3581	14.094	NaN	4111.4	30	0	1537.3	0.034			+	-1	GSCWGCEF	8	43	473.16422692381155	944.3139009144231	2	473.1640930175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_GSC(Carbamidomethyl (C))WGCEF_	REV__ENSG00000076356|ENST00000367033|PLXNA2	14.664097394203935	0.7913966407026132	4				NaN	NaN	0	NaN	1289	2290	3575
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3582	14.095	NaN	5371.3	30	0	574.43	0.139	+			34909	SAAEAVKEK	9	64	466.7562378865666	931.4979228399333	2	466.7554626464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SAAEAVKEK_	ENSG00000096696|ENST00000379802|DSP;nc|ENSG00000096696|P15924-2|DSP;nc|ENSG00000096696|P15924-3|DSP	88.17693792209575	0.07000514020414955	4				NaN	NaN	0	NaN	1290	2290	3575
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3596	14.126	NaN	29836	30	0	6218.2	0.214	+			15094	GTQIHKVCK	9	85	535.7924630092373	1069.5703730852745	2	535.7927856445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GTQIHKVC(Carbamidomethyl (C))K_	ENST00000594085.5_1_19:40854624-40871501:+|nuORF	112.41091882917199	0.026537921851008135	4				NaN	NaN	0	NaN	1301	2293	3595
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3597	14.13	NaN	17837	30	0	2062.1	0.106	+			40169	STQSKVMNK	9	79	511.7687416448839	1021.5229303565678	2	511.7686462402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STQSKVMNK_	ENSG00000165113|ENST00000376371|GKAP1;nc|ENSG00000165113|Q5VSY0-2|GKAP1	138.06239232086	0.011389075116295402	4				NaN	NaN	0	NaN	1302	2293	3595
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3598	14.132	NaN	12340	30	0	1256.9	0.106	+			44569	TTASQTNIKK	10	80	546.3064888423678	1090.5984247515355	2	546.3067016601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TTASQTNIKK_	ENSG00000225921|ENST00000451315|NOL7;nc|ENSG00000225921|Q9UMY1-2|NOL7;NOL7|p.K238Nfs*16|1|0.31|ENSG00000225921|chr6:13620760-13620760|A/-|frameshift_variant;NOL7|p.N240Mfs*14|1|0.23|ENSG00000225921|chr6:13620769-13620769|A/-|frameshift_variant	150.36159442982594	0.008431331982545942	4				NaN	NaN	0	NaN	1303	2293	3595
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3599	14.134	NaN	4220.9	30	0	702.17	0.106			+	2830	ASAFGGARTK	10	50	483.2619238439286	964.5092947546573	2	483.2615661621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASAFGGARTK_	REV__ENSG00000147586|ENST00000276585|MRPS28;REV__ENST00000522987.1_1_8:80870573-80942483:-|nuORF	44.639436926238396	0.506394993251866	4				NaN	NaN	0	NaN	1304	2293	3595
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3600	14.135	NaN	9944.3	30	0	3254.5	0.106			+	35755	SDVARFRPLQ	10	71	594.8280635068033	1187.6415740804066	2	594.8277587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SDVARFRPLQ_	REV__ENST00000389532.8_1_9:138714293-138714353:-|nuORF	50.033510581677724	0.4566913063131936	4				NaN	NaN	0	NaN	1305	2293	3595
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3601	14.137	NaN	8197.5	30	0	1490.4	0.038	+			23575	LALNYQFCIQ	10	62	606.8069483505855	1211.5993437679708	2	606.8078002929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LALNYQFCIQ_	ENSG00000135838|ENST00000367553|NPL;ENST00000463899.5_1_1:182781291-182795122:+|nuORF;nc|ENSG00000135838|Q9BXD5-2|NPL;nc|ENSG00000135838|Q9BXD5-3|NPL	23.04248740728303	0.69165701907106	4				NaN	NaN	0	NaN	1306	2293	3595
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3602	14.138	NaN	1823.8	30	0	318.79	0.143	+			43441	TGLKLIMSC	9	47	322.51007080078125	NaN	0	322.51007080078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TGLKLIMSC_	USP38|p.N109T|1|0.09|ENSG00000170185|chr4:143185776-143185776|A/C|missense_variant	25.57405402267927	0.3484490411150625	4				NaN	NaN	0	NaN	1307	2293	3595
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3620	14.177	NaN	16869	30	0	3867.3	0.214	+			35543	SAVPPTKEK	9	71	478.7739852755354	955.5334176178708	2	478.7739562988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAVPPTKEK_	ENSG00000131503|ENST00000360839|ANKHD1;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	90.60085204095205	0.06317133949006545	4				NaN	NaN	0	NaN	1322	2296	3619
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3621	14.181	NaN	3033.7	30	0	776.76	0.106				-1	TAVKKKPMA	9	47	330.53162584567775	988.5730481372333	3	330.5318603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_TAVKKKPM(Oxidation (M))A_	ENSG00000144749|ENST00000273261|LRIG1;ENST00000495037.1_1_3:66430689-66454678:-|nuORF;ENST00000496559.6_1_3:66430689-66456253:-|nuORF;nc|ENSG00000144749|Q96JA1-2|LRIG1	18.262085536374414	0.6112419832031293	4				NaN	NaN	0	NaN	1323	2296	3619
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3622	14.183	NaN	5567.1	30	0	1825.9	0.106	+			32724	RANHIPMV	8	43	469.25597245355357	936.4973919739072	2	469.255615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RANHIPMV_	ENST00000603219.1_1_5:99387445-99387523:-|nuORF	21.70233525837049	0.7917639344264583	4				NaN	NaN	0	NaN	1324	2296	3619
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3623	14.185	NaN	4542.8	30	0	938.29	0.106				-1	RCLRTACE	8	49	533.2487108018179	NaN	0	533.2489013671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_RC(Carbamidomethyl (C))LRTAC(Carbamidomethyl (C))E_	ENST00000419827.2_1_7:10491071-10492091:+|nuORF	23.04248740728303	1.7418937515398478	4				NaN	NaN	0	NaN	1325	2296	3619
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3624	14.186	NaN	3785.6	30	0	1009.7	0.106	+			37118	SISVVRCVE	9	60	496.26667740827935	NaN	0	496.2672119140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SISVVRCVE_	ENSG00000077238|ENST00000395762|IL4R;IL4R|p.E684Kfs*3|1|0.54|ENSG00000077238|chr16:27363398-27363398|G/-|frameshift_variant;nc|ENSG00000077238|P24394-3|IL4R	32.81241826257853	0.3119040447479903	4				NaN	NaN	0	NaN	1326	2296	3619
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3625	14.188	NaN	2735.7	30	0	589.09	0.034	+			3409	ASQIPSSRQ	9	48	487.2573746385205	NaN	0	487.27484130859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASQIPSSRQ_	ENSG00000160294|ENST00000291688|MCM3AP;ENST00000467026.5_1_21:47655184-47679082:-|nuORF;ENST00000486937.5_1_21:47655184-47666418:-|nuORF;ENST00000496607.5_1_21:47655184-47686088:-|nuORF;nc|ENSG00000160294|O60318-2|MCM3AP	36.446750945000026	0.29355505452396785	4				NaN	NaN	0	NaN	1327	2296	3619
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3626	14.189	NaN	4991.1	30	0	639.77	0.139	+			56	AAAQNAIKK	9	58	457.77474985592295	913.5349467786459	2	457.774169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AAAQNAIKK_	ENSG00000137076|ENST00000314888|TLN1;ENSG00000171914|ENST00000636159|TLN2;nc|ENSG00000137076|Q9Y490-2|TLN1;TLN1|p.P1628Rfs*20|1|0.44|ENSG00000137076|chr9:35707144-35707144|G/-|frameshift_variant	115.45897859103373	0.02394878348088707	4				NaN	NaN	0	NaN	1328	2296	3619
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3644	14.227	NaN	40117	30	0	13343	0.214	+			34211	RTDTASRLK	9	81	524.2989975820201	1046.58344223084	2	524.299072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTDTASRLK_	ENSG00000054654|ENST00000555002|SYNE2;ENST00000394768.6_2_14:64542710-64692241:+|nuORF;ENST00000554805.6_2_14:64676062-64692241:+|nuORF;ENST00000555022.5_2_14:64671104-64692241:+|nuORF;nc|ENSG00000054654|Q8WXH0-13|SYNE2;nc|ENSG00000054654|Q8WXH0-3|SYNE2;nc|ENSG00000054654|Q8WXH0-4|SYNE2;nc|ENSG00000054654|Q8WXH0-7|SYNE2;nc|ENSG00000054654|Q8WXH0|SYNE2;SYNE2|p.S6651Rfs*83|1|0.29|ENSG00000054654|chr14:64220596-64220597|-/G|frameshift_variant	152.06079943815163	0.00638878961959199	4				NaN	NaN	0	NaN	1343	2299	3643
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3645	14.231	NaN	28710	30	0	4551.6	0.106	+			3773	ATAEQACKEK	10	92	539.7637541952716	1077.5129554573432	2	539.7639770507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATAEQACKEK_	ENSG00000125844|ENST00000377813|RRBP1;nc|ENSG00000125844|Q9P2E9-3|RRBP1;RRBP1|p.A628Gfs*69|1|0.35|ENSG00000125844|chr20:17621915-17621916|-/T|frameshift_variant	157.3448221729694	0.007191409758142479	4				NaN	NaN	0	NaN	1344	2299	3643
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3646	14.233	NaN	9305.8	30	0	5259.9	0.106			+	-1	AEMMAHALK	9	43	517.2442798994396	1032.474006865679	2	517.2438354492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Oxidation (M)	_AEM(Oxidation (M))M(Oxidation (M))AHALK_	REV__ENSG00000153823|ENST00000392055|PID1;REV__nc|ENSG00000153823|Q7Z2X4-2|PID1;REV__nc|ENSG00000153823|Q7Z2X4-3|PID1;REV__nc|ENSG00000153823|Q7Z2X4|PID1	31.954861631926434	0.5046124803899898	4				NaN	NaN	0	NaN	1345	2299	3643
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3647	14.234	NaN	7901.5	30	0	1342.5	0.106			+	7926	DSGRHHLHL	9	65	536.2777695226949	1070.5409861121898	2	536.2783813476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DSGRHHLHL_	REV__ENST00000445028.1_1_X:43137608-43138196:-|nuORF	33.51558372728122	0.4900267029546261	4				NaN	NaN	0	NaN	1346	2299	3643
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3648	14.236	NaN	5658	30	0	1486.2	0.106			+	28234	NCPHSCDPGW	10	45	558.2072081795626	1114.399863425925	2	558.2070922851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NCPHSCDPGW_	REV__ENSG00000162591|ENST00000356575|MEGF6;REV__MEGF6|p.A1440Gfs*4|1|0.29|ENSG00000162591|chr1:3493839-3493840|-/C|frameshift_variant;REV__MEGF6|p.A1440Hfs*78|2|0.41|ENSG00000162591|chr1:3493840-3493840|C/-|frameshift_variant;REV__MEGF6|p.R1079Gfs*195|1|0.36|ENSG00000162591|chr1:3498488-3498488|G/-|frameshift_variant;REV__nc|ENSG00000162591|O75095-2|MEGF6	20.94693142431847	0.7087701759873708	4				NaN	NaN	0	NaN	1347	2299	3643
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3649	14.238	NaN	5660.8	30	0	1037.5	0.035			+	32180	QSSLEDEVV	9	56	503.24064697602273	NaN	0	503.2410583496094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QSSLEDEVV_	REV__ENST00000453476.1_1_2:60586842-60618443:-|nuORF	60.11826168202944	0.14881452885248947	4				NaN	NaN	0	NaN	1348	2299	3643
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3650	14.239	NaN	4033.1	30	0	992.07	0.141			+	11349	FLFLPLTYA	9	43	542.8062133789062	NaN	0	542.8062133789062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FLFLPLTYA_	REV__ENST00000578651.5_1_18:683014-712587:-|nuORF	14.664097394203935	0.38735045005659413	4				NaN	NaN	0	NaN	1349	2299	3643
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3668	14.277	NaN	5218.5	30	0	519.21	0.214	+			44550	TTAEGMAKK	9	62	468.7451585070542	935.4757640809084	2	468.7447204589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTAEGMAKK_	ENSG00000184897|ENST00000333762|H1-10	153.03582135801034	0.006161527642367307	4				NaN	NaN	0	NaN	1364	2302	3667
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3669	14.281	NaN	8310.2	30	0	1757.7	0.106	+			4390	ATHLVTKAK	9	61	484.7984968624462	967.5824407916924	2	484.7982177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATHLVTKAK_	ENSG00000160584|ENST00000445177|SIK3;ENST00000485363.1_1_11:116775672-116969011:-|nuORF;nc|ENSG00000160584|Q9Y2K2-7|SIK3;nc|ENSG00000160584|Q9Y2K2-8|SIK3;nc|ENSG00000160584|Q9Y2K2|SIK3;SIK3|p.F285Lfs*9|1|0.33|ENSG00000160584|chr11:116896263-116896263|A/-|frameshift_variant	93.1432384553994	0.056003526918089595	4				NaN	NaN	0	NaN	1365	2302	3667
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3670	14.283	NaN	5508.4	30	0	768.95	0.106	+			4391	ATHLVTKAK	9	73	323.5343281485083	967.5811550457249	3	323.5344543457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATHLVTKAK_	ENSG00000160584|ENST00000445177|SIK3;ENST00000485363.1_1_11:116775672-116969011:-|nuORF;nc|ENSG00000160584|Q9Y2K2-7|SIK3;nc|ENSG00000160584|Q9Y2K2-8|SIK3;nc|ENSG00000160584|Q9Y2K2|SIK3;SIK3|p.F285Lfs*9|1|0.33|ENSG00000160584|chr11:116896263-116896263|A/-|frameshift_variant	34.172542307311794	0.4838870758800184	4				NaN	NaN	0	NaN	1366	2302	3667
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3671	14.285	NaN	6346.1	30	0	1308.7	0.106	+			12264	GAVKPPPNK	9	63	454.27160566049304	906.5286583877861	2	454.271728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GAVKPPPNK_	ENSG00000167674|ENST00000616600|HDGFL2;nc|ENSG00000167674|Q7Z4V5-2|HDGFL2;nc|ENSG00000167674|Q7Z4V5-3|HDGFL2;nc|ENSG00000167674|Q7Z4V5-4|HDGFL2	138.24224950522367	0.011304696901763419	4				NaN	NaN	0	NaN	1367	2302	3667
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3672	14.287	NaN	3517.4	30	0	597.92	0.106			+	41526	SVPVSGTTVK	10	55	487.78021240234375	NaN	0	487.78021240234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVPVSGTTVK_	REV__ENSG00000164171|ENST00000296585|ITGA2	45.97224482568171	0.33106653400957564	4				NaN	NaN	0	NaN	1368	2302	3667
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3673	14.288	NaN	3958.1	30	0	706.57	0.034	+			40992	SVGPPSKDK	9	55	457.7507875583075	913.487022183415	2	457.7508239746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVGPPSKDK_	ENSG00000142546|ENST00000596358|NOSIP;ENST00000596477.1_1_19:50059010-50060533:-|nuORF;ENST00000598550.5_1_19:50059857-50060422:-|nuORF	69.6276240434122	0.14239879520340665	4				NaN	NaN	0	NaN	1369	2302	3667
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3674	14.289	NaN	6460.6	30	0	2479.8	0.143	+			36896	SIHGRPVTK	9	57	332.19766721813636	993.5711722546091	3	332.1979675292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SIHGRPVTK_	ENSG00000138640|ENST00000264344|FAM13A;ENST00000508360.5_1_4:89653076-89671014:-|nuORF;ENST00000511573.5_1_4:89649686-89680064:-|nuORF;FAM13A|p.E827K|1|0.28|ENSG00000138640|chr4:88739113-88739113|C/T|missense_variant;nc|ENSG00000138640|O94988-1|FAM13A;nc|ENSG00000138640|O94988-3|FAM13A;nc|ENSG00000138640|O94988-5|FAM13A;nc|ENSG00000138640|O94988-6|FAM13A	37.81151784470057	0.4459294069877048	4				NaN	NaN	0	NaN	1370	2302	3667
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3691	14.326	NaN	72377	30	0	13337	0.177	+			41092	SVINNSHNK	9	88	506.76201114746976	1011.5094693617395	2	506.7618713378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVINNSHNK_	ENSG00000121892|ENST00000303538|PDS5A;nc|ENSG00000121892|Q29RF7-3|PDS5A	174.8648734531126	0.001936507438084573	4				NaN	NaN	0	NaN	1384	2305	3690
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3692	14.329	NaN	4420.6	30	0	608.45	0.106				-1	MECALHLE	8	49	494.21878741119997	986.4230218892	2	494.2180480957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))MECALHLE_	ENSG00000167996|ENST00000273550|FTH1;ENST00000432137.1_1_9:15527225-15527390:-|nuORF;ENST00000534719.1_1_11:61732389-61734897:-|nuORF;FTH1|p.V111A|1|0.11|ENSG00000167996|chr11:61965042-61965042|A/G|missense_variant	18.324413293986947	0.7971860551947066	4				NaN	NaN	0	NaN	1385	2305	3690
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3693	14.331	NaN	5582.8	30	0	1398.2	0.106				-1	CEDMSYGEE	9	34	560.1847419235143	NaN	0	559.7044067382812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_C(Carbamidomethyl (C))EDMSYGEE_	CCNG2|p.C313Y|1|0.14|ENSG00000138764|chr4:77165827-77165827|G/A|missense_variant	7.690282842768113	0.40727630907727536	4				NaN	NaN	0	NaN	1386	2305	3690
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3694	14.333	NaN	14696	30	0	2676.6	0.106	+			4034	ATDDSKAVCR	10	81	561.7641136895567	1121.5136744459132	2	561.7642822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_ATDDSKAVC(Carbamidomethyl (C))R_	ENSG00000115758|ENST00000234111|ODC1	142.36107225718385	0.01012457621782354	4				NaN	NaN	0	NaN	1387	2305	3690
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3695	14.334	NaN	5294.9	30	0	1019.3	0.106	+			9366	EIVVEEEEE	9	62	552.7518310546875	NaN	0	552.7518310546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EIVVEEEEE_	ENSG00000205903|ENST00000382252|ZNF316	23.04248740728303	0.3589936788096251	4				NaN	NaN	0	NaN	1388	2305	3690
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3696	14.336	NaN	5918.4	30	0	998.8	0.106				-1	QGVVVGMGQK	10	58	509.7714534621451	1017.5283539910902	2	509.7709045410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_QGVVVGM(Oxidation (M))GQK_	ACTA1|p.M46V|1|0.34|ENSG00000143632|chr1:229432874-229432874|T/C|missense_variant	34.172542307311794	0.6007644933930345	4				NaN	NaN	0	NaN	1389	2305	3690
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3697	14.338	NaN	7540	30	0	1689.7	0.038			+	-1	FLMDLDRGEP	10	49	604.7830810546875	NaN	0	604.7830810546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_FLM(Oxidation (M))DLDRGEP_	REV__B4GALNT4|p.G768Afs*19|1|0.14|ENSG00000182272|chr11:379512-379512|G/-|frameshift_variant;REV__ENSG00000182272|ENST00000329962|B4GALNT4;REV__ENST00000530717.1_1_11:369803-372772:+|nuORF	20.94693142431847	0.4201028297492154	4				NaN	NaN	0	NaN	1390	2305	3690
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3712	14.37	NaN	14990	30	0	1920.4	0.214	+			45704	VAAKPVATK	9	72	442.78156005905885	883.5485671849177	2	442.7815246582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VAAKPVATK_	COL6A3|p.A2956Lfs*45|1|0.33|ENSG00000163359|chr2:237336234-237336234|C/-|frameshift_variant;COL6A3|p.A2957Lfs*44|1|0.33|ENSG00000163359|chr2:237336232-237336232|A/-|frameshift_variant;COL6A3|p.G3016Vfs*19|1|0.34|ENSG00000163359|chr2:237334810-237334810|G/-|frameshift_variant;ENSG00000163359|ENST00000295550|COL6A3;ENST00000491769.1_1_2:238233419-238250825:-|nuORF;nc|ENSG00000163359|P12111-2|COL6A3;nc|ENSG00000163359|P12111-4|COL6A3	132.757866228626	0.013877640931359021	4				NaN	NaN	0	NaN	1402	2308	3711
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3713	14.373	NaN	38140	30	0	12003	0.106	+			3127	ASGWPWSQ	8	64	459.709203135441	917.403853337682	2	459.7087707519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASGWPWSQ_	ENST00000436336.6_1_7:99054594-99054750:+|nuORF	30.317721548370564	0.7252424349988982	4				NaN	NaN	0	NaN	1403	2308	3711
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3714	14.375	NaN	5070.5	30	0	1868.9	0.106	+			39083	SSSSTVAE	8	44	384.1743326493404	766.3341123654808	2	384.1744689941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSSSTVAE_	ENSG00000142798|ENST00000374695|HSPG2;HSPG2|p.C2696Sfs*49|1|0.18|ENSG00000142798|chr1:21847425-21847431|GCCCGGC/-|frameshift_variant;HSPG2|p.P3071Hfs*100|1|0.06|ENSG00000142798|chr1:21841639-21841655|GATGATGGAGCCATTGG/-|frameshift_variant;HSPG2|p.P3112Lfs*13|1|0.47|ENSG00000142798|chr1:21841279-21841279|G/-|frameshift_variant	19.359975847455235	0.7988239741663654	4				NaN	NaN	0	NaN	1404	2308	3711
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3715	14.377	NaN	20061	30	0	4855.7	0.106				-1	 	0	61	520.2631199619175	1038.5116869906349	2	520.262939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1405	2308	3711
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3716	14.379	NaN	12847	30	0	3468.7	0.106			+	17460	ICHYFKGA	8	43	469.73042136367354	937.4462897941471	2	470.6979675292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ICHYFKGA_	REV__ENSG00000136531|ENST00000375437|SCN2A;REV__ENSG00000144285|ENST00000674923|SCN1A;REV__nc|ENSG00000136531|Q99250-2|SCN2A;REV__nc|ENSG00000144285|P35498-2|SCN1A;REV__nc|ENSG00000144285|P35498-3|SCN1A;REV__SCN1A|p.N1378S|1|0.39|ENSG00000144285|chr2:166002623-166002623|T/C|missense_variant	14.664097394203935	0.7913966407026132	4				NaN	NaN	0	NaN	1406	2308	3711
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3717	14.381	NaN	7618	30	0	2113.8	0.035			+	7492	DGGLPIGHAK	10	51	322.17785477936496	963.5117349382949	3	322.1784362792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DGGLPIGHAK_	REV__ENST00000462392.5_1_2:131104212-131104311:+|nuORF	27.882242232435846	0.6521336255503853	4				NaN	NaN	0	NaN	1407	2308	3711
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3718	14.381	NaN	8438.6	30	0	3031.8	0.14				-1	GLDCCNCCL	9	50	500.6722863522888	999.3300197713776	2	500.6719665527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_GLDCCNC(Carbamidomethyl (C))CL_	ENSG00000157514|ENST00000372383|TSC22D3	17.364965105453717	0.6112419832031293	4				NaN	NaN	0	NaN	1408	2308	3711
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3733	14.414	NaN	14835	30	0	1186.8	0.214				-1	 	0	66	515.7986724895006	1029.5827920458012	2	515.7982788085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1420	2311	3732
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3734	14.417	NaN	6428.7	30	0	1218.1	0.106				-1	LCQETCCC	8	40	508.66999897332187	1015.3254450134438	2	508.66937255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_LC(Carbamidomethyl (C))QETCC(Carbamidomethyl (C))C_	ENSG00000204880|ENST00000333822|KRTAP4-8	18.324413293986947	0.7971860551947066	4				NaN	NaN	0	NaN	1421	2311	3732
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3735	14.419	NaN	9704.5	30	0	2300.6	0.106				-1	EIHDGMFRK	9	57	574.7788303290315	1147.543107724863	2	574.7798461914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_EIHDGM(Oxidation (M))FRK_	ENSG00000143797|ENST00000305997|MBOAT2;ENST00000474341.5_1_2:9017150-9098660:-|nuORF;ENST00000486484.5_1_2:9002434-9143743:-|nuORF	25.57405402267927	0.5642445186134241	4				NaN	NaN	0	NaN	1422	2311	3732
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3736	14.421	NaN	8288	30	0	1645.2	0.106	+			29129	NTYPFHTPV	9	47	538.2644696752545	NaN	0	537.7988891601562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NTYPFHTPV_	ENSG00000147133|ENST00000423759|TAF1;nc|ENSG00000147133|P21675-1|TAF1;nc|ENSG00000147133|P21675-13|TAF1;nc|ENSG00000147133|P21675-15|TAF1;nc|ENSG00000147133|P21675-16|TAF1;nc|ENSG00000147133|P21675-17|TAF1;nc|ENSG00000147133|P21675-18|TAF1;nc|ENSG00000147133|P21675-19|TAF1;nc|ENSG00000147133|P21675-20|TAF1;nc|ENSG00000147133|P21675-21|TAF1;nc|ENSG00000147133|P21675-22|TAF1;nc|ENSG00000147133|P21675-23|TAF1;nc|ENSG00000147133|P21675-24|TAF1;nc|ENSG00000147133|P21675-25|TAF1;nc|ENSG00000147133|P21675|TAF1;TAF1|p.L1451Cfs*4|1|0.04|ENSG00000147133|chrX:71408121-71408125|CTAAT/-|frameshift_variant	23.04248740728303	0.3589936788096251	4				NaN	NaN	0	NaN	1423	2311	3732
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3737	14.423	NaN	18419	30	0	2570.1	0.106	+			41088	SVINNGHNQK	10	73	555.78651706927	1109.5584812053398	2	555.7860107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVINNGHNQK_	ENSG00000083642|ENST00000315596|PDS5B;ENST00000498550.5_1_13:33222909-33262824:+|nuORF;nc|ENSG00000083642|Q9NTI5-2|PDS5B;nc|ENSG00000083642|Q9NTI5-3|PDS5B;PDS5B|p.G721Dfs*35|1|0.13|ENSG00000083642|chr13:32732132-32732132|A/-|frameshift_variant;PDS5B|p.K1268Rfs*8|1|0.07|ENSG00000083642|chr13:32770296-32770296|A/-|frameshift_variant;PDS5B|p.K1287Rfs*22|1|0.26|ENSG00000083642|chr13:32770351-32770351|A/-|frameshift_variant;PDS5B|p.K693Qfs*8|1|0.11|ENSG00000083642|chr13:32710054-32710055|-/T|frameshift_variant;PDS5B|p.N1390Cfs*12|1|0.44|ENSG00000083642|chr13:32770750-32770751|AA/-|frameshift_variant;PDS5B|p.S1198Vfs*10|1|0.28|ENSG00000083642|chr13:32764556-32764556|A/-|frameshift_variant	125.71293069911285	0.01926106323661889	4				NaN	NaN	0	NaN	1424	2311	3732
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3738	14.425	NaN	4437.6	30	0	791.94	0.034	+			44046	TPQELPGPK	9	50	483.76684786245903	965.5191427917181	2	483.7665100097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TPQELPGPK_	ENST00000353159.6_2_9:33461728-33461932:-|nuORF	35.61828744233558	0.47037581924408073	4				NaN	NaN	0	NaN	1425	2311	3732
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3739	14.425	NaN	3515.8	30	0	531.72	0.139			+	6712	CAAPHSRCC	9	35	474.18624403235185	946.3579351315037	2	474.1858825683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_CAAPHSRCC_	REV__PRAF2|p.R95C|1|0.83|ENSG00000243279|chrX:49072547-49072547|G/A|missense_variant	21.9598887501803	0.5980208138527809	4				NaN	NaN	0	NaN	1426	2311	3732
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3753	14.457	NaN	7999.8	30	0	2451.5	0.214	+			21939	KSADPLKSK	9	54	325.1938929227748	972.5598493685245	3	325.194091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSADPLKSK_	CAPN7|p.K253Nfs*21|1|0.35|ENSG00000131375|chr3:15227870-15227870|A/-|frameshift_variant;ENSG00000131375|ENST00000253693|CAPN7;ENST00000457023.1_1_3:15247773-15262489:+|nuORF	37.50817390946774	0.44948750990682723	4				NaN	NaN	0	NaN	1437	2314	3752
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3754	14.46	NaN	5553.1	30	0	1108.3	0.106				-1	GCGHRILP	8	47	455.2402613523715	908.465969771543	2	455.2400817871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GC(Carbamidomethyl (C))GHRILP_	ENST00000429541.6_1_11:3392284-3398995:-|nuORF	20.481830146152948	0.8005983782650069	4				NaN	NaN	0	NaN	1438	2314	3752
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3755	14.462	NaN	5677.6	30	0	708.81	0.106	+			24455	LGFFYGKK	8	61	480.2706054017798	958.5266578703596	2	480.2705993652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LGFFYGKK_	ENSG00000027644|ENST00000368195|INSRR	60.29395666154354	0.49887135096048313	4				NaN	NaN	0	NaN	1439	2314	3752
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3756	14.464	NaN	9128.1	30	0	1825.3	0.106			+	22081	KSLLEVHDN	9	52	527.7779553325602	1053.5413577319202	2	527.7777099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KSLLEVHDN_	REV__tr|U7T5N9|U7T5N9_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00122PE=4SV=1	29.170058357718403	0.5306379469863586	4				NaN	NaN	0	NaN	1440	2314	3752
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3757	14.466	NaN	2924.1	30	0	666.86	0.106	+			8090	DWDAEDLQ	8	38	496.20333391326767	990.3921148933354	2	496.2030334472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DWDAEDLQ_	ENSG00000196547|ENST00000559717|MAN2A2;ENST00000560192.5_1_15:91447248-91454469:+|nuORF;MAN2A2|p.V832Rfs*6|1|0.43|ENSG00000196547|chr15:90912894-90912895|-/C|frameshift_variant;nc|ENSG00000196547|P49641-1|MAN2A2;nc|ENSG00000196547|P49641-2|MAN2A2	20.481830146152948	0.8005983782650069	4				NaN	NaN	0	NaN	1441	2314	3752
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3758	14.468	NaN	12173	30	0	1812.9	0.038	+			23168	KVYTKSSHLK	10	67	595.8485694632082	1189.6825859932162	2	595.8485717773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KVYTKSSHLK_	ENSG00000067082|ENST00000497571|KLF6;ENSG00000102349|ENST00000468660|KLF8;ENSG00000102554|ENST00000377687|KLF5;ENSG00000109787|ENST00000261438|KLF3;ENSG00000118263|ENST00000309446|KLF7;ENSG00000118922|ENST00000703967|KLF12;ENST00000358094.7_1_X:56295423-56310924:+|nuORF;ENST00000462627.5_1_X:56295800-56310924:+|nuORF;nc|ENSG00000067082|Q99612-2|KLF6;nc|ENSG00000067082|Q99612-3|KLF6;nc|ENSG00000102554|Q13887-2|KLF5;nc|ENSG00000102554|Q13887-4|KLF5;nc|ENSG00000118263|O75840-2|KLF7;nc|ENSG00000118263|O75840-4|KLF7	70.8162118820467	0.27065172005956	4				NaN	NaN	0	NaN	1442	2314	3752
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3759	14.468	NaN	4383.5	30	0	1095.6	0.141			+	-1	KASGRCIGM	9	41	469.73042136367354	937.4462897941471	2	469.7300109863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_KASGRCIGM(Oxidation (M))_	REV__ENSG00000100626|ENST00000448469|GALNT16;REV__nc|ENSG00000100626|Q8N428-2|GALNT16	31.954861631926434	0.5046124803899898	4				NaN	NaN	0	NaN	1443	2314	3752
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3774	14.501	NaN	36779	30	0	15071	0.214	+			14688	GTIGHVAHGK	10	83	488.76998030150367	975.5254076698074	2	488.7696838378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTIGHVAHGK_	EIF2S3|p.I441Nfs*4|1|0.29|ENSG00000130741|chrX:24073223-24073224|-/A|frameshift_variant;ENSG00000130741|ENST00000253039|EIF2S3;ENSG00000180574|ENST00000538173|EIF2S3B;nc|ENSG00000180574|Q2VIR3-2|EIF2S3B	124.08010499294276	0.021567188538240013	4				NaN	NaN	0	NaN	1455	2317	3773
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3775	14.505	NaN	9147.8	30	0	1969	0.106	+			41055	SVIENAKKK	9	70	508.8088385539296	1015.6031241746592	2	508.80853271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVIENAKKK_	ENSG00000132305|ENST00000410111|IMMT;ENST00000409258.2_1_2:86386442-86398424:-|nuORF;ENST00000474969.5_1_2:86385703-86422514:-|nuORF;ENST00000490238.5_1_2:86385703-86389088:-|nuORF;nc|ENSG00000132305|Q16891-2|IMMT;nc|ENSG00000132305|Q16891-3|IMMT;nc|ENSG00000132305|Q16891-4|IMMT	112.41091882917199	0.026537921851008135	4				NaN	NaN	0	NaN	1456	2317	3773
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3776	14.507	NaN	14201	30	0	3569.8	0.106	+			24968	LLATSSSRYQ	10	64	563.298792895153	1124.583032857106	2	563.298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LLATSSSRYQ_	ENSG00000110697|ENST00000356404|PITPNM1;ENST00000527370.5_1_11:67264693-67266053:-|nuORF;nc|ENSG00000110697|O00562-2|PITPNM1;PITPNM1|p.L610Wfs*101|1|0.21|ENSG00000110697|chr11:67497634-67497634|G/-|frameshift_variant	40.77816245573522	0.5419747034533848	4				NaN	NaN	0	NaN	1457	2317	3773
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3777	14.509	NaN	2924	30	0	795.76	0.106				-1	LMVSRPFSV	9	42	351.1925282043394	NaN	0	351.19256591796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_LM(Oxidation (M))VSRPFSV_	ENSG00000008226|ENST00000308059|DLEC1;nc|ENSG00000008226|Q9Y238-3|DLEC1	19.996771675451527	0.3693019437812985	4				NaN	NaN	0	NaN	1458	2317	3773
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3778	14.51	NaN	11304	30	0	2940.5	0.106			+	-1	RSQARCPCP	9	53	537.7503318634004	1073.4861107936008	2	538.2646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_RSQARCPC(Carbamidomethyl (C))P_	REV__ENST00000497986.5_1_1:28562878-28564486:+|nuORF	21.9598887501803	0.5980208138527809	4				NaN	NaN	0	NaN	1459	2317	3773
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3779	14.512	NaN	8373.9	30	0	4516.6	0.035				-1	LMFFNQKG	8	46	500.7490128351722	999.4834727371444	2	500.7488708496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_LM(Oxidation (M))FFNQKG_	ENST00000423531.3_1_3:195057665-195063210:-|nuORF	28.2542754592877	0.7411748056684583	4				NaN	NaN	0	NaN	1460	2317	3773
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3780	14.513	NaN	10376	30	0	2963.9	0.14	+			6965	CPQPLFKVGA	10	48	530.2862162403937	1058.5578795475874	2	530.2862548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_CPQPLFKVGA_	ENSG00000132297|ENST00000414222|HHLA1;nc|ENSG00000132297|C9JL84-2|HHLA1	20.83715455343099	0.7096666582730032	4				NaN	NaN	0	NaN	1461	2317	3773
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3795	14.546	NaN	195240	30	0	57323	0.103	+			15387	GTYDAKVKK	9	81	505.28775155387524	1008.5609501745505	2	505.2876281738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTYDAKVKK_	ENSG00000159713|ENST00000393957|TPPP3	127.46168284122857	0.016682644177004526	4				NaN	NaN	0	NaN	1473	2320	3794
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3796	14.548	NaN	272970	30	0	81511	0.106	+			15388	GTYDAKVKK	9	84	337.1939131582359	1008.5599100749077	3	337.1941833496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTYDAKVKK_	ENSG00000159713|ENST00000393957|TPPP3	42.396135135203025	0.392153681582562	4				NaN	NaN	0	NaN	1474	2320	3794
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3797	14.55	NaN	57466	30	0	26341	0.106			+	21146	KKTGNSSPSQ	10	59	517.267020696606	1032.5194884600119	2	517.2666625976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KKTGNSSPSQ_	REV__ENSG00000116668|ENST00000367500|SWT1	51.19269402634007	0.44601001148513897	4				NaN	NaN	0	NaN	1475	2320	3794
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3798	14.552	NaN	9283.5	30	0	2233.8	0.106				-1	 	0	43	378.20705246595173	377.19977599935174	1	378.2072448730469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1476	2320	3794
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3799	14.554	NaN	24034	30	0	9774	0.106			+	36519	SFDRSATSGK	10	57	528.2588601396552	NaN	0	528.2576293945312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SFDRSATSGK_	REV__ENST00000538888.5_1_12:123738221-123738578:+|nuORF;REV__nc|ENSG00000130921|Q9H3J6-2|MTRFR	42.86426827375447	0.3507156137006061	4				NaN	NaN	0	NaN	1477	2320	3794
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3800	14.555	NaN	12330	30	0	5090.6	0.106			+	-1	MTDSMMRVP	9	32	558.2303773224118	1114.4462017116234	2	558.2301025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	3 Oxidation (M)	_M(Oxidation (M))TDSM(Oxidation (M))M(Oxidation (M))RVP_	REV__ENSG00000153237|ENST00000283233|CCDC148	13.45404412870281	0.6112419832031293	4				NaN	NaN	0	NaN	1478	2320	3794
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3801	14.557	NaN	6914.5	30	0	2038.1	0.033			+	20739	KGTSAKIF	8	62	426.2526903955821	850.4908278579642	2	426.25286865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KGTSAKIF_	REV__tr|U7ST00|U7ST00_FUSNUNagDproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01658PE=3SV=1	53.351449002276354	0.5676011784961348	4				NaN	NaN	0	NaN	1479	2320	3794
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3802	14.558	NaN	10256	30	0	2975	0.141			+	-1	NRMCPLQQ	8	49	531.7442499687455	1061.473947004291	2	531.744384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Carbamidomethyl (C),Oxidation (M)	_NRM(Oxidation (M))C(Carbamidomethyl (C))PLQQ_	REV__ENSG00000111783|ENST00000392842|RFX4;REV__nc|ENSG00000111783|Q33E94-2|RFX4;REV__nc|ENSG00000111783|Q33E94-3|RFX4	18.324413293986947	0.7971860551947066	4				NaN	NaN	0	NaN	1480	2320	3794
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3818	14.589	NaN	4849.4	30	0	1187.1	0.214			+	7550	DHGPGPGE	8	42	383.1615088376368	764.3084647420736	2	383.1618957519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DHGPGPGE_	REV__GTPBP3|p.P388H|1|0.43|ENSG00000130299|chr19:17341232-17341232|C/A|missense_variant	26.79610172149135	0.7524337208463756	4				NaN	NaN	0	NaN	1493	2323	3817
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3819	14.593	NaN	6229.7	30	0	1046.2	0.106				-1	EKATPRCY	8	63	512.7451591885285	NaN	0	512.301025390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_EKATPRC(Carbamidomethyl (C))Y_	ENST00000341418.9_1_15:68114320-68117168:+|nuORF	47.91560031466742	1.7418937515398478	4				NaN	NaN	0	NaN	1494	2323	3817
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3820	14.595	NaN	10478	30	0	1863.2	0.106			+	-1	TEYMTEVMDD	10	43	625.23388671875	NaN	0	625.23388671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_TEYM(Oxidation (M))TEVMDD_	REV__tr|U7STN2|U7STN2_FUSNUPeptidedeformylaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=defPE=3SV=1	14.864876125193954	0.4201028297492154	4				NaN	NaN	0	NaN	1495	2323	3817
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3821	14.597	NaN	9004	30	0	3627	0.106			+	-1	PFFCTPLGP	9	51	345.837363526197	1034.4902611787911	3	345.837646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_PFFC(Carbamidomethyl (C))TPLGP_	REV__ENST00000495272.5_1_1:95705378-95709907:+|nuORF	21.9598887501803	0.5980208138527809	4				NaN	NaN	0	NaN	1496	2323	3817
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3822	14.599	NaN	8422.6	30	0	1503.6	0.106	+			9221	EGSLDETGLGP	11	63	537.7496337890625	NaN	0	537.7496337890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EGSLDETGLGP_	ENSG00000128731|ENST00000261609|HERC2	51.19269402634007	0.30675235723580535	4				NaN	NaN	0	NaN	1497	2323	3817
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3823	14.6	NaN	1736.4	30	0	219.28	0.035				-1	 	0	43	331.0021048673284	NaN	0	331.190673828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1498	2323	3817
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3824	14.601	NaN	7863.5	30	0	1495.4	0.142			+	16085	HDCTFIESPD	10	40	582.239501953125	NaN	0	582.239501953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HDCTFIESPD_	REV__CMTR2|p.S551Ffs*2|1|0.36|ENSG00000180917|chr16:71284269-71284270|-/A|frameshift_variant;REV__ENSG00000180917|ENST00000434935|CMTR2	15.641811463095205	0.4201028297492154	4				NaN	NaN	0	NaN	1499	2323	3817
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3842	14.64	NaN	9757.6	30	0	1112.2	0.214	+			15158	GTSEVIHRK	9	74	513.7884878527472	1025.5624227722942	2	513.7882690429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTSEVIHRK_	ENSG00000169375|ENST00000394947|SIN3A	58.2462437865262	0.22823408064396822	4				NaN	NaN	0	NaN	1514	2326	3841
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3843	14.643	NaN	11118	30	0	2534.9	0.106	+			11120	FFSRSPAHS	9	55	518.2529565438867	1034.4913601545734	2	518.2528076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FFSRSPAHS_	nc|ENSG00000253868|Q96M78|FER1L6-AS2	37.15910966729921	0.4535818937225704	4				NaN	NaN	0	NaN	1515	2326	3841
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3844	14.645	NaN	4650.1	30	0	727.75	0.106	+			40993	SVGPPSKDK	9	48	457.7507875583075	913.487022183415	2	457.7503967285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVGPPSKDK_	ENSG00000142546|ENST00000596358|NOSIP;ENST00000596477.1_1_19:50059010-50060533:-|nuORF;ENST00000598550.5_1_19:50059857-50060422:-|nuORF	77.31757898189308	0.1091473830098891	4				NaN	NaN	0	NaN	1516	2326	3841
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3845	14.647	NaN	9664.3	30	0	1864.8	0.106			+	2730	AQWDYRKS	8	68	527.258263809834	1052.501974686468	2	527.2583618164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AQWDYRKS_	REV__DHX57|p.L732Wfs*7|2|0.33|ENSG00000163214|chr2:38847043-38847043|A/-|frameshift_variant;REV__ENSG00000163214|ENST00000457308|DHX57;REV__ENST00000479345.2_1_2:39084268-39090579:-|nuORF;REV__nc|ENSG00000163214|Q6P158-2|DHX57;REV__nc|ENSG00000163214|Q6P158-3|DHX57	38.80614096846853	0.6637206697844082	4				NaN	NaN	0	NaN	1517	2326	3841
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3846	14.649	NaN	7721.2	30	0	1772.2	0.106			+	42161	SYSSFSWLM	9	46	554.2421264648438	NaN	0	554.2421264648438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SYSSFSWLM_	REV__ENST00000378244.6_1_12:100657547-100657670:-|nuORF	24.20275056022122	0.35506675290109213	4				NaN	NaN	0	NaN	1518	2326	3841
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3847	14.651	NaN	4821.5	30	0	1272.8	0.036			+	51211	YPRCETFGS	9	37	530.2322998046875	NaN	0	530.2322998046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YPRCETFGS_	REV__ENSG00000066405|ENST00000183605|CLDN18	16.473147378115264	0.38122769658151995	4				NaN	NaN	0	NaN	1519	2326	3841
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3848	14.651	NaN	13766	30	0	1871.3	0.141	+			38705	SSKSQTEVPK	10	76	545.7908738115719	1089.5671946899438	2	545.791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSKSQTEVPK_	chr10:128113602-128116491|398|11.56|0.71|4.03|-|ENST00000368653|MKI67,MKI67;ENSG00000148773|ENST00000368654|MKI67;MKI67|p.L2374*|1|0.28|ENSG00000148773|chr10:128104719-128104719|A/-|frameshift_variant;MKI67|p.L783Hfs*49|1|0.05|ENSG00000148773|chr10:128110447-128110448|-/TG|frameshift_variant;MKI67|p.L783Yfs*49|1|0.05|ENSG00000148773|chr10:128110446-128110447|-/GT|frameshift_variant;MKI67|p.R3036Yfs*27|1|0.04|ENSG00000148773|chr10:128102735-128102736|-/AAAATAA|frameshift_variant;MKI67|p.T672Nfs*4|1|0.25|ENSG00000148773|chr10:128112000-128112001|-/T|frameshift_variant;nc|ENSG00000148773|P46013-2|MKI67	96.0336014099291	0.09653029772959643	4				NaN	NaN	0	NaN	1520	2326	3841
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3866	14.69	NaN	4299	30	0	461.03	0.214			+	21222	KLGFTNKK	8	50	468.2868347167969	NaN	0	468.2868347167969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KLGFTNKK_	REV__ENST00000414423.6_1_1:224575719-224575878:-|nuORF	69.6276240434122	1.7418937515398478	4				NaN	NaN	0	NaN	1535	2329	3865
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3867	14.694	NaN	11797	30	0	4452.5	0.106	+			7642	DKNGTSLDIK	10	62	364.1960046098246	1089.566184429674	3	364.1961975097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DKNGTSLDIK_	tr|U7SZG0|U7SZG0_FUSNUAutotransporterdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00737PE=4SV=1	36.31764250033197	0.5830761606467809	4				NaN	NaN	0	NaN	1536	2329	3865
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3868	14.696	NaN	1575.2	30	0	190.55	0.106				-1	TGDPRMKPK	9	41	349.18692710111793	NaN	0	349.1869201660156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_TGDPRM(Oxidation (M))KPK_	ENSG00000157637|ENST00000374759|SLC38A10	32.81241826257853	0.3119040447479903	4				NaN	NaN	0	NaN	1537	2329	3865
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3869	14.697	NaN	8896.3	30	0	1158.3	0.106			+	16568	HFIECQLPQ	9	58	557.770444222125	1113.5263355110499	2	557.7703247070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HFIECQLPQ_	REV__ENSG00000133454|ENST00000335473|MYO18B;REV__MYO18B|p.I1502Ffs*3|1|0.09|ENSG00000133454|chr22:25891370-25891370|A/-|frameshift_variant;REV__MYO18B|p.K1556Sfs*19|1|0.16|ENSG00000133454|chr22:25895276-25895276|A/-|frameshift_variant;REV__nc|ENSG00000133454|Q8IUG5-2|MYO18B;REV__nc|ENSG00000133454|Q8IUG5-3|MYO18B	45.9519527083369	0.35044536499095585	4				NaN	NaN	0	NaN	1538	2329	3865
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3870	14.699	NaN	8962.4	30	0	1524.6	0.106			+	27284	MGGGIMDEER	10	71	547.7351744827232	NaN	0	547.734619140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MGGGIMDEER_	REV__ENST00000484858.1_1_9:139701238-139702139:+|nuORF	54.776311868738084	0.27540594196716844	4				NaN	NaN	0	NaN	1539	2329	3865
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3871	14.701	NaN	9830.8	30	0	2135.9	0.036	+			9531	ELAVHNECY	9	65	539.2380196728242	1076.4614864124483	2	539.2373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ELAVHNECY_	nc|ENSG00000165240|Q04656-3|ATP7A	62.107414245175825	0.1960472003779324	4				NaN	NaN	0	NaN	1540	2329	3865
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3872	14.702	NaN	13402	30	0	2900.2	0.141	+			41672	SVSAPSKKVAK	11	85	551.3349528814575	1100.655352829715	2	551.3346557617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVSAPSKKVAK_	ENSG00000160710|ENST00000368474|ADAR;nc|ENSG00000160710|P55265-2|ADAR;nc|ENSG00000160710|P55265-3|ADAR;nc|ENSG00000160710|P55265-4|ADAR;nc|ENSG00000160710|P55265-5|ADAR	79.03558427241974	0.16041291136517336	4				NaN	NaN	0	NaN	1541	2329	3865
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3890	14.741	NaN	20457	30	0	6383	0.214	+			42607	TATAVAHCK	9	76	451.23159624606444	900.4486395589289	2	451.2315673828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TATAVAHCK_	chr19:39435705-39435848|468|276.17|0.0|24.72|-|0|RPS16,RPS16|1;ENSG00000105193|ENST00000251453|RPS16;ENST00000601390.1_1_19:39926180-39926535:-|nuORF	127.46168284122857	0.016682644177004526	4				NaN	NaN	0	NaN	1556	2332	3889
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3891	14.745	NaN	8442.8	30	0	1216.7	0.106				-1	 	0	69	549.2800402161123	548.2727637495123	1	549.2803955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1557	2332	3889
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3892	14.747	NaN	6340.9	30	0	1041.9	0.106	+			2715	AQSQVQMKK	9	59	524.2845604122134	NaN	0	524.226318359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AQSQVQMKK_	ENSG00000133895|ENST00000450708|MEN1;nc|ENSG00000133895|O00255-1|MEN1;nc|ENSG00000133895|O00255-3|MEN1	45.97224482568171	0.23445038899310136	4				NaN	NaN	0	NaN	1558	2332	3889
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3893	14.749	NaN	6067.5	30	0	765.43	0.106	+			50220	WNIITGNK	8	60	473.2607410590801	944.5069291849602	2	473.2593688964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_WNIITGNK_	APAF1|p.E1208Gfs*14|1|0.23|ENSG00000120868|chr12:98732437-98732438|-/G|frameshift_variant;ENSG00000120868|ENST00000551964|APAF1;nc|ENSG00000120868|O14727-2|APAF1;nc|ENSG00000120868|O14727-3|APAF1;nc|ENSG00000120868|O14727-4|APAF1;nc|ENSG00000120868|O14727-5|APAF1	44.116797842482775	0.6307669463330267	4				NaN	NaN	0	NaN	1559	2332	3889
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3894	14.75	NaN	6513.6	30	0	1208.7	0.106			+	12147	GAIKHPSPIR	10	61	538.3214305936406	NaN	0	538.3228759765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GAIKHPSPIR_	REV__ENST00000444102.1_1_6:167412443-167412509:-|nuORF	42.396135135203025	0.3536752194735987	4				NaN	NaN	0	NaN	1560	2332	3889
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3895	14.752	NaN	3988.5	30	0	734.93	0.034	+			2845	ASALEAHQK	9	54	477.75391800265464	NaN	0	477.7539367675781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASALEAHQK_	ENSG00000182318|ENST00000329665|ZSCAN22	54.776311868738084	0.17377682019723872	4				NaN	NaN	0	NaN	1561	2332	3889
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3896	14.753	NaN	5351.4	30	0	1169.4	0.14	+			42220	TAAIDILRQ	9	57	500.79289649216923	NaN	0	500.7928771972656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TAAIDILRQ_	ENST00000374180.3_1_9:116136757-116139093:-|nuORF;ENST00000485934.1_1_9:116137738-116139093:-|nuORF	32.81241826257853	0.3119040447479903	4				NaN	NaN	0	NaN	1562	2332	3889
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3913	14.791	NaN	192190	30	0	29526	0.202	+			3658	ASYGVSKGK	9	110	448.7452740957884	895.4759952583768	2	448.7452087402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASYGVSKGK_	ENSG00000153187|ENST00000640218|HNRNPU;nc|ENSG00000153187|Q00839-2|HNRNPU	101.45984612302182	0.0377122763612125	4				NaN	NaN	0	NaN	1576	2335	3912
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3914	14.794	NaN	19373	30	0	2961.1	0.106	+			33038	REKDTVKKL	9	65	558.8408172028833	1115.6670814725665	2	558.8407592773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_REKDTVKKL_	ENSG00000125844|ENST00000377813|RRBP1;nc|ENSG00000125844|Q9P2E9-3|RRBP1	54.722347961057174	0.257609425301511	4				NaN	NaN	0	NaN	1577	2335	3912
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3915	14.796	NaN	9751.2	30	0	3451.9	0.106	+			31635	QMLRGQPAL	9	64	338.5232612266715	1012.5479542802145	3	338.5234680175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QMLRGQPAL_	BOC|p.P449H|1|0.59|ENSG00000144857|chr3:113274486-113274486|C/A|missense_variant;ENSG00000144857|ENST00000682979|BOC;nc|ENSG00000144857|Q9BWV1|BOC	25.450171626174864	0.5654022654467333	4				NaN	NaN	0	NaN	1578	2335	3912
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3916	14.798	NaN	11423	30	0	2326.2	0.106	+			15099	GTQIHKVCK	9	60	507.281670864145	NaN	0	507.2817077636719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTQIHKVCK_	ENST00000594085.5_1_19:40854624-40871501:+|nuORF	60.11826168202944	0.14881452885248947	4				NaN	NaN	0	NaN	1579	2335	3912
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3917	14.8	NaN	20672	30	0	2789.1	0.106				-1	 	0	71	585.2869433611786	584.2796668945786	1	585.2867431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1580	2335	3912
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3918	14.801	NaN	20738	30	0	9230	0.035				-1	DECHPECI	8	65	501.68748479883936	1001.3604166644787	2	501.6872253417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_DEC(Carbamidomethyl (C))HPECI_	ENST00000270357.9_2_2:241508179-241513275:+|nuORF	26.79610172149135	0.7524337208463756	4				NaN	NaN	0	NaN	1581	2335	3912
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3919	14.802	NaN	6690.7	30	0	2044.1	0.139			+	24443	LGEETHEM	8	56	473.204442106485	944.39433127977	2	472.76129150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LGEETHEM_	REV__ENSG00000141376|ENST00000407086|BCAS3;REV__ENST00000585812.5_1_17:59431721-59456358:+|nuORF;REV__ENST00000587294.5_1_17:59445549-59469483:+|nuORF;REV__ENST00000592702.5_1_17:59431721-59469483:+|nuORF;REV__nc|ENSG00000141376|Q9H6U6-3|BCAS3;REV__nc|ENSG00000141376|Q9H6U6-6|BCAS3;REV__nc|ENSG00000141376|Q9H6U6-7|BCAS3;REV__nc|ENSG00000141376|Q9H6U6-8|BCAS3;REV__nc|ENSG00000141376|Q9H6U6|BCAS3	26.79610172149135	0.7524337208463756	4				NaN	NaN	0	NaN	1582	2335	3912
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3937	14.84	NaN	80749	30	0	15892	0.177	+			38941	SSQPLASKQEK	11	98	601.822332553454	1201.6301121737079	2	601.822509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSQPLASKQEK_	ENSG00000137309|ENST00000311487|HMGA1;nc|ENSG00000137309|P17096-2|HMGA1;nc|ENSG00000137309|P17096-3|HMGA1	172.2149298939913	2.224532351664191E-05	4				NaN	NaN	0	NaN	1597	2338	3936
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3938	14.843	NaN	38627	30	0	13225	0.106				-1	ERIHTGEKPC	10	86	613.8015685146738	1225.5885840961475	2	613.8018798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_ERIHTGEKPC(Carbamidomethyl (C))_	ENSG00000169131|ENST00000335815|ZNF354A;ENSG00000171295|ENST00000304060|ZNF440;ENSG00000178338|ENST00000322434|ZNF354B;ZNF45|p.Y332C|1|0.28|ENSG00000124459|chr19:43914441-43914441|T/C|missense_variant	77.31757898189308	0.2175361111083648	4				NaN	NaN	0	NaN	1598	2338	3936
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3939	14.845	NaN	10194	30	0	2390.8	0.106	+			4953	ATQSPISKK	9	66	480.2796010967902	958.5446492603804	2	480.27947998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATQSPISKK_	ENSG00000132382|ENST00000254718|MYBBP1A;ENST00000574547.5_1_17:4442712-4447986:-|nuORF;ENST00000574934.5_1_17:4442712-4445225:-|nuORF;nc|ENSG00000132382|Q9BQG0-2|MYBBP1A	134.7655990226056	0.012935733000282069	4				NaN	NaN	0	NaN	1599	2338	3936
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3940	14.847	NaN	6070.8	30	0	1471.2	0.106				-1	CIVFLMTC	8	50	493.7275052466259	NaN	0	493.7275390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_CIVFLMTC(Carbamidomethyl (C))_	ENSG00000213593|ENST00000278422|TMX2	21.70233525837049	1.7418937515398478	4				NaN	NaN	0	NaN	1600	2338	3936
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3941	14.849	NaN	13685	30	0	1762.5	0.106				-1	MKDQFLMDEQ	10	54	650.7825927734375	NaN	0	650.7825927734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_MKDQFLM(Oxidation (M))DEQ_	SEMA4A|p.H395Q|1|0.24|ENSG00000196189|chr1:156172876-156172876|T/A|missense_variant	21.68575002086885	0.4201028297492154	4				NaN	NaN	0	NaN	1601	2338	3936
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3942	14.851	NaN	3796.9	30	0	632.95	0.106			+	50656	YEDSNDEF	8	38	509.6851468877303	1017.3557408422606	2	509.6849670410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YEDSNDEF_	REV__CSE1L|p.E367D|1|0.14|ENSG00000124207|chr20:49074819-49074819|G/C|missense_variant	12.959181472943097	0.7887000251064199	4				NaN	NaN	0	NaN	1602	2338	3936
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3943	14.852	NaN	1555.8	30	0	194.58	0.032	+			42093	SYGVSKGK	8	34	413.2267150878906	NaN	0	413.2267150878906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SYGVSKGK_	ENSG00000153187|ENST00000640218|HNRNPU;nc|ENSG00000153187|Q00839-2|HNRNPU	37.15910966729921	1.7418937515398478	4				NaN	NaN	0	NaN	1603	2338	3936
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3960	14.887	NaN	77688	30	0	22842	0.214	+			45283	TVRARHIE	8	71	327.8576098888924	980.5510002668773	3	327.8578186035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVRARHIE_	ENST00000445701.5_1_3:3150344-3168296:-|nuORF	31.954861631926434	0.7126016770032289	4				NaN	NaN	0	NaN	1617	2341	3959
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3961	14.89	NaN	18254	30	0	7562.3	0.106			+	-1	EGEKVCKR	8	77	503.2616697502727	1004.5087865673454	2	503.2620849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_EGEKVC(Carbamidomethyl (C))KR_	REV__ENST00000519935.1_1_7:27209203-27211037:+|nuORF	38.80614096846853	0.6637206697844082	4				NaN	NaN	0	NaN	1618	2341	3959
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3962	14.893	NaN	15678	30	0	1884.8	0.106	+			49251	VVNSPHRQYK	10	69	614.3333740234375	NaN	0	614.3333740234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVNSPHRQYK_	ENSG00000164933|ENST00000297578|SLC25A32	61.76455937419982	0.21986853317854868	4				NaN	NaN	0	NaN	1619	2341	3959
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3963	14.894	NaN	4853	30	0	1010.8	0.106	+			2484	APPRAGGR	8	46	391.2249156667611	780.4352784003222	2	391.22515869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_APPRAGGR_	ENST00000562648.2_1_16:743493-744282:-|nuORF	60.29395666154354	0.49887135096048313	4				NaN	NaN	0	NaN	1620	2341	3959
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3964	14.896	NaN	4252.6	30	0	669.47	0.106	+			38406	SSAAVHRLK	9	58	484.7852478027344	NaN	0	484.7852478027344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSAAVHRLK_	CBX6|p.L242Wfs*2|2|0.44|ENSG00000183741|chr22:38866724-38866724|G/-|frameshift_variant;ENSG00000183741|ENST00000407418|CBX6	45.97224482568171	0.23445038899310136	4				NaN	NaN	0	NaN	1621	2341	3959
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3965	14.898	NaN	9478.5	30	0	1563	0.035			+	8404	EAPKESLES	9	62	495.24071516014817	NaN	0	495.2408142089844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EAPKESLES_	REV__ENSG00000151725|ENST00000281453|CENPU;REV__nc|ENSG00000151725|Q71F23-3|CENPU	47.657333605630114	0.2228375344433429	4				NaN	NaN	0	NaN	1622	2341	3959
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3966	14.899	NaN	6361.3	30	0	1946.2	0.138	+			42510	TAPPARNR	8	55	441.7487579190916	881.4829629049832	2	441.748779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TAPPARNR_	ENSG00000163320|ENST00000482016|CGGBP1	68.484700416344	0.4195245774506064	4				NaN	NaN	0	NaN	1623	2341	3959
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3984	14.937	NaN	109990	30	0	19572	0.214	+			44855	TTTTTHITK	9	95	502.2747033725866	1002.5348538119732	2	502.27435302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTTTTHITK_	ENSG00000079819|ENST00000337057|EPB41L2;ENSG00000082397|ENST00000341928|EPB41L3;ENST00000368126.2_1_6:131179278-131186801:-|nuORF;ENST00000452150.6_1_6:131179278-131188835:-|nuORF;nc|ENSG00000079819|O43491-3|EPB41L2;nc|ENSG00000079819|O43491-4|EPB41L2;nc|ENSG00000082397|Q9Y2J2-2|EPB41L3;nc|ENSG00000082397|Q9Y2J2-4|EPB41L3	140.11223852658463	0.010427410095706195	4				NaN	NaN	0	NaN	1638	2344	3983
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3985	14.94	NaN	31719	30	0	9852.9	0.106	+			33769	RPVLQQQQQ	9	69	562.8121237649132	NaN	0	562.8120727539062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RPVLQQQQQ_	ENSG00000124151|ENST00000371998|NCOA3;nc|ENSG00000124151|Q9Y6Q9-2|NCOA3;nc|ENSG00000124151|Q9Y6Q9-3|NCOA3;nc|ENSG00000124151|Q9Y6Q9-4|NCOA3;nc|ENSG00000124151|Q9Y6Q9-5|NCOA3	44.116797842482775	0.2472372736944149	4				NaN	NaN	0	NaN	1639	2344	3983
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3986	14.942	NaN	39308	30	0	15907	0.106	+			11968	FVLWCLCSVY	10	74	616.7958223313743	1231.5770917295486	2	616.7959594726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FVLWCLCSVY_	DIP2C|p.H1200Lfs*7|1|0.08|ENSG00000151240|chr10:329587-329588|-/GCCCA|frameshift_variant;ENSG00000151240|ENST00000280886|DIP2C	29.14955571784316	0.6417842315402807	4				NaN	NaN	0	NaN	1640	2344	3983
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3987	14.944	NaN	4448.7	30	0	423.65	0.106	+			5633	AVDAGGVRK	9	59	436.75077628153554	871.4869996298711	2	436.75103759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVDAGGVRK_	ENSG00000148634|ENST00000373700|HERC4;ENST00000427635.6_1_10:69682690-69747802:-|nuORF;ENST00000480158.1_1_10:69714333-69714887:-|nuORF;nc|ENSG00000148634|Q5GLZ8-3|HERC4;nc|ENSG00000148634|Q5GLZ8-6|HERC4;nc|ENSG00000148634|Q5GLZ8|HERC4	71.87747018426188	0.13267044672804276	4				NaN	NaN	0	NaN	1641	2344	3983
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3988	14.946	NaN	13172	30	0	5611.2	0.106			+	37301	SLCVVLFVA	9	68	336.52576456040384	1006.5554642814116	3	336.52587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_SLC(Carbamidomethyl (C))VVLFVA_	REV__DDX39B|p.F149Lfs*13|4|0.27|ENSG00000198563|chr6:31536669-31536669|A/-|frameshift_variant	42.396135135203025	0.392153681582562	4				NaN	NaN	0	NaN	1642	2344	3983
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3989	14.948	NaN	3989.7	30	0	1362.1	0.106				-1	 	0	53	454.6701116291483	907.3256703250967	2	454.66986083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1643	2344	3983
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	3990	14.95	NaN	15518	30	0	2706.7	0.038				-1	NSALDMYKLAG	11	69	599.7940475921484	1197.5735422510968	2	599.793701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_NSALDM(Oxidation (M))YKLAG_	ENSG00000152954|ENST00000378491|NRSN1	27.047317107675042	0.7060868989289394	4				NaN	NaN	0	NaN	1644	2344	3983
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4008	14.987	NaN	5467.7	30	0	978.25	0.214	+			7729	DLSYCLRR	8	51	513.2645609747708	1024.5145690163415	2	514.2539672851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DLSYCLRR_	PAN3|p.P517S|1|0.24|ENSG00000152520|chr13:28266852-28266852|C/T|missense_variant	26.79610172149135	0.7524337208463756	4				NaN	NaN	0	NaN	1659	2347	4007
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4009	14.991	NaN	7518.5	30	0	1483	0.106			+	-1	KFYKCLKQ	8	62	557.8061451749368	1113.5977374166735	2	557.8060302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_KFYKC(Carbamidomethyl (C))LKQ_	REV__ENST00000483500.1_1_4:74607357-74607417:+|nuORF	60.29395666154354	0.49887135096048313	4				NaN	NaN	0	NaN	1660	2347	4007
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4010	14.993	NaN	2777.9	30	0	1085.1	0.106	+			36171	SELFRILK	8	46	335.8731994628906	NaN	0	335.8731994628906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SELFRILK_	tr|U7ST76|U7ST76_FUSNUMethyltransferasetype11domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01318PE=4SV=1	23.04248740728303	1.7418937515398478	4				NaN	NaN	0	NaN	1661	2347	4007
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4011	14.995	NaN	8717.2	30	0	1512.9	0.106	+			39340	STCEQIKDK	9	76	554.7691769930532	1107.5238010529063	2	554.7692260742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_STC(Carbamidomethyl (C))EQIKDK_	ENSG00000158435|ENST00000289382|CNOT11	155.5846463517096	0.005567437401040498	4				NaN	NaN	0	NaN	1662	2347	4007
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4012	14.997	NaN	4663.2	30	0	963.47	0.106				-1	GWETVEMHP	9	45	551.2352905273438	NaN	0	551.2352905273438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_GWETVEM(Oxidation (M))HP_	ENSG00000104805|ENST00000405315|NUCB1;ENST00000492367.1_1_19:49422384-49425678:+|nuORF	18.324413293986947	0.3749620627292244	4				NaN	NaN	0	NaN	1663	2347	4007
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4013	14.998	NaN	5178.3	30	0	1205.8	0.035				-1	MLVCFGSHP	9	54	524.2400002282268	1046.4654475232535	2	525.2435913085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_MLVC(Carbamidomethyl (C))FGSHP_	ENST00000568104.5_1_16:56518540-56518618:-|nuORF	35.200714571348534	0.47427825964483533	4				NaN	NaN	0	NaN	1664	2347	4007
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4014	14.999	NaN	1938.6	30	0	364.1	0.143			+	-1	DSCDADDDC	9	43	339.0926921251437	NaN	0	338.8817138671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_DSC(Carbamidomethyl (C))DADDDC_	REV__ENSG00000147852|ENST00000382100|VLDLR;REV__nc|ENSG00000147852|P98155-2|VLDLR;REV__VLDLR|p.P558Wfs*8|1|0.03|ENSG00000147852|chr9:2646519-2646520|-/ATGGACTTTTT|frameshift_variant	10.265252068803164	0.4022383999429647	4				NaN	NaN	0	NaN	1665	2347	4007
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4032	15.038	NaN	18464	30	0	3078.9	0.214	+			39619	STIATSHPK	9	83	471.2564273586696	940.4983017841392	2	471.2560729980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STIATSHPK_	ENSG00000007952|ENST00000372966|NOX1;nc|ENSG00000007952|Q9Y5S8-3|NOX1	134.81075121484326	0.012914550297035062	4				NaN	NaN	0	NaN	1680	2350	4031
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4033	15.042	NaN	3750.6	30	0	951.22	0.106			+	-1	TGTAFMPT	8	42	421.1929629015753	NaN	0	421.19293212890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_TGTAFM(Oxidation (M))PT_	REV__FBXW4|p.P292Qfs*86|1|0.46|ENSG00000107829|chr10:101612444-101612444|A/-|frameshift_variant	26.79610172149135	1.7418937515398478	4				NaN	NaN	0	NaN	1681	2350	4031
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4034	15.044	NaN	9669.9	30	0	1345.5	0.106				-1	QKNCRFEVSS	10	70	627.7987670898438	NaN	0	627.7987670898438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_QKNC(Carbamidomethyl (C))RFEVSS_	SETMAR|p.R471C|1|0.16|ENSG00000170364|chr3:4316602-4316602|C/T|missense_variant	39.252832667884924	0.37128895876774715	4				NaN	NaN	0	NaN	1682	2350	4031
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4035	15.046	NaN	8201.9	30	0	1774.5	0.106			+	-1	CGHQCSLVSM	10	57	597.7394012933963	1193.4642496535926	2	597.7394409179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C),Oxidation (M)	_C(Carbamidomethyl (C))GHQC(Carbamidomethyl (C))SLVSM(Oxidation (M))_	REV__ENST00000529077.5_1_11:134231258-134237194:+|nuORF	35.61828744233558	0.588957954432594	4				NaN	NaN	0	NaN	1683	2350	4031
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4036	15.048	NaN	3737	30	0	791.77	0.106	+			38376	SRSQSKSR	8	66	468.2525477345811	NaN	0	468.2525329589844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SRSQSKSR_	ENSG00000163660|ENST00000295926|CCNL1;ENST00000470121.5_1_3:156866032-156869342:-|nuORF;ENST00000474539.5_1_3:156866032-156868247:-|nuORF;ENST00000476744.5_1_3:156866032-156867533:-|nuORF;REV__ENSG00000188529|ENST00000492112|SRSF10;REV__ENST00000338597.9_1_1:24297634-24304405:-|nuORF;REV__ENST00000485841.5_1_1:24297634-24301602:-|nuORF;REV__nc|ENSG00000188529|O75494-2|SRSF10	64.20726635412375	1.7418937515398478	4				NaN	NaN	0	NaN	1684	2350	4031
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4037	15.049	NaN	13889	30	0	2630.4	0.035			+	9006	EGADEASVNR	10	56	524.2400002282268	1046.4654475232535	2	524.2405395507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EGADEASVNR_	REV__ENSG00000160867|ENST00000292408|FGFR4;REV__ENST00000508139.1_1_5:176518793-176520368:+|nuORF;REV__FGFR4|p.E717Rfs*8|1|0.44|ENSG00000160867|chr5:177096729-177096730|-/C|frameshift_variant;REV__FGFR4|p.G687Afs*35|1|0.23|ENSG00000160867|chr5:177096644-177096644|G/-|frameshift_variant;REV__nc|ENSG00000160867|P22455-2|FGFR4	47.657333605630114	0.47858658696240314	4				NaN	NaN	0	NaN	1685	2350	4031
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4038	15.05	NaN	6725.7	30	0	1861.2	0.14			+	-1	FYGCADCGLG	10	58	531.7044067382812	NaN	0	531.7044067382812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_FYGCADC(Carbamidomethyl (C))GLG_	REV__ENSG00000171219|ENST00000342711|CDC42BPG	27.882242232435846	0.4086243523356342	4				NaN	NaN	0	NaN	1686	2350	4031
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4056	15.089	NaN	4502	30	0	851.01	0.214	+			3936	ATASVVKEK	9	66	466.77451311999977	931.5344733067996	2	466.77392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATASVVKEK_	ENSG00000160058|ENST00000455895|BSDC1;ENST00000474414.5_1_1:32849477-32859770:-|nuORF;ENST00000533084.1_1_1:32852298-32860015:-|nuORF;nc|ENSG00000160058|Q9NW68-2|BSDC1;nc|ENSG00000160058|Q9NW68-3|BSDC1;nc|ENSG00000160058|Q9NW68-5|BSDC1;nc|ENSG00000160058|Q9NW68-7|BSDC1;nc|ENSG00000160058|Q9NW68-8|BSDC1	101.25262130126117	0.03792372629710479	4				NaN	NaN	0	NaN	1701	2353	4055
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4057	15.093	NaN	13019	30	0	2055	0.106	+			42674	TAYLHQHQK	9	76	563.2939489516048	1124.5733449700094	2	563.2938232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAYLHQHQK_	ENSG00000152454|ENST00000282308|ZNF256;ENSG00000173480|ENST00000312026|ZNF417;ENSG00000198466|ENST00000339656|ZNF587;ENST00000598928.1_1_19:58452294-58458975:-|nuORF;nc|ENSG00000198466|Q96SQ5-2|ZNF587;ZNF256|p.E544Dfs*7|1|0.08|ENSG00000152454|chr19:57941176-57941177|-/ATGAGTG|frameshift_variant;ZNF256|p.Y603*|1|0.08|ENSG00000152454|chr19:57940999-57941000|AT/-|frameshift_variant;ZNF417|p.R546Kfs*4|1|0.34|ENSG00000173480|chr19:57908641-57908642|-/T|frameshift_variant	60.11826168202944	0.21262886028301267	4				NaN	NaN	0	NaN	1702	2353	4055
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4058	15.095	NaN	10441	30	0	1993.6	0.106				-1	ELGICDQPR	9	58	544.2643900553214	1086.5142271774428	2	544.2647094726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_ELGIC(Carbamidomethyl (C))DQPR_	GP2|p.E250Gfs*33|1|0.34|ENSG00000169347|chr16:20320380-20320381|-/C|frameshift_variant	44.116797842482775	0.37197099687881774	4				NaN	NaN	0	NaN	1703	2353	4055
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4059	15.097	NaN	10680	30	0	1719.8	0.106			+	36536	SFHLIPNAIT	10	60	556.8070404655942	1111.5995279979884	2	556.8071899414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SFHLIPNAIT_	REV__ENSG00000104884|ENST00000391945|ERCC2;REV__ENST00000391942.6_1_19:45854889-45865127:-|nuORF	32.81241826257853	0.6118718159329168	4				NaN	NaN	0	NaN	1704	2353	4055
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4060	15.099	NaN	3042.2	30	0	738.8	0.106	+			13718	GPVNKTQTT	9	34	473.253479474837	944.492406016474	2	473.2899475097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GPVNKTQTT_	HERV1_I-int_dup2|chr3:34679996-34686397:+|1.0948245018220069|0.0565463038051543|4.28|448.0|173|3|sense	16.473147378115264	0.6112419832031293	4				NaN	NaN	0	NaN	1705	2353	4055
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4061	15.1	NaN	6467.5	30	0	1654.7	0.036			+	30237	PSSVRGGEHPA	11	47	547.273338920845	NaN	0	547.27294921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PSSVRGGEHPA_	REV__ENSG00000100167|ENST00000644076|SEPTIN3	23.52269567125451	0.456735970842152	4				NaN	NaN	0	NaN	1706	2353	4055
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4062	15.101	NaN	7933.3	30	0	2101.7	0.142				-1	HFSGGQLMVTG	11	56	575.272705078125	NaN	0	575.272705078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_HFSGGQLM(Oxidation (M))VTG_	ENSG00000165269|ENST00000297988|AQP7;nc|ENSG00000165269|O14520-2|AQP7	30.317721548370564	0.4303027717346894	4				NaN	NaN	0	NaN	1707	2353	4055
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4080	15.14	NaN	14238	30	0	3206.5	0.214	+			15511	GVCGKGFKK	9	68	490.77107930185673	979.5276056705135	2	490.7707824707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GVC(Carbamidomethyl (C))GKGFKK_	ENSG00000167625|ENST00000301215|ZNF526	102.7733458925114	0.03637199559902695	4				NaN	NaN	0	NaN	1722	2356	4079
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4081	15.144	NaN	4512.7	30	0	1491	0.106				-1	RRAMRKAS	8	40	331.1905542770636	NaN	0	331.1905212402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_RRAM(Oxidation (M))RKAS_	PCDHGA6|p.F770Sfs*23|1|0.29|ENSG00000253731|chr5:141376389-141376389|T/-|frameshift_variant	29.14955571784316	1.7418937515398478	4				NaN	NaN	0	NaN	1723	2356	4079
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4082	15.146	NaN	5794.3	30	0	1698.4	0.106	+			42298	TAETMSVK	8	53	441.716511000471	881.418469067742	2	441.7167053222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_TAETM(Oxidation (M))SVK_	ENST00000521467.5_1_8:72740403-72875206:+|nuORF	68.484700416344	0.4195245774506064	4				NaN	NaN	0	NaN	1724	2356	4079
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4083	15.148	NaN	6193.7	30	0	977.52	0.106			+	46251	VEESTLAAEK	10	49	538.7791929151257	1075.5438328970513	2	539.7313842773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VEESTLAAEK_	REV__ENSG00000197694|ENST00000372739|SPTAN1;REV__ENST00000475367.1_1_9:131356439-131361310:+|nuORF;REV__nc|ENSG00000197694|Q13813-3|SPTAN1;REV__nc|ENSG00000197694|Q13813|SPTAN1	29.170058357718403	0.6416167986984785	4				NaN	NaN	0	NaN	1725	2356	4079
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4084	15.15	NaN	16061	30	0	2137.2	0.106	+			39191	SSYSQVRNK	9	84	534.7754061352268	1067.5362593372536	2	534.7757568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSYSQVRNK_	ENSG00000068878|ENST00000404125|PSME4;nc|ENSG00000068878|Q14997-2|PSME4;nc|ENSG00000068878|Q14997-3|PSME4;PSME4|p.V1190Cfs*2|1|0.15|ENSG00000068878|chr2:53897908-53897909|-/A|frameshift_variant	124.08010499294276	0.018729767491916592	4				NaN	NaN	0	NaN	1726	2356	4079
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4085	15.151	NaN	11037	30	0	2169.8	0.038			+	-1	MVTCNTVNGPT	11	54	597.2694091796875	NaN	0	597.2694091796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_MVTC(Carbamidomethyl (C))NTVNGPT_	REV__ENSG00000042781|ENST00000307340|USH2A;REV__nc|ENSG00000042781|O75445-3|USH2A;REV__USH2A|p.E5096Gfs*82|1|0.44|ENSG00000042781|chr1:215634469-215634470|-/C|frameshift_variant;REV__USH2A|p.T3753Lfs*31|1|0.37|ENSG00000042781|chr1:215758727-215758727|T/-|frameshift_variant;REV__USH2A|p.W2964Gfs*10|1|0.21|ENSG00000042781|chr1:215845989-215845989|A/-|frameshift_variant	16.006774744331256	0.456735970842152	4				NaN	NaN	0	NaN	1727	2356	4079
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4086	15.152	NaN	3403.3	30	0	1058.8	0.141				-1	QCESPDET	8	38	483.18128314239345	964.3480133515869	2	483.1805114746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_QC(Carbamidomethyl (C))ESPDET_	ENSG00000165899|ENST00000547103|OTOGL;OTOGL|p.C2147Mfs*2|1|0.4|ENSG00000165899|chr12:80367723-80367724|-/A|frameshift_variant;OTOGL|p.K2146Nfs*40|2|0.16|ENSG00000165899|chr12:80367724-80367724|A/-|frameshift_variant	13.775330524044264	0.789990904165365	4				NaN	NaN	0	NaN	1728	2356	4079
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4103	15.189	NaN	49048	30	0	23218	0.215	+			6341	AVTKYTSSK	9	81	328.84998212641096	983.528116979433	3	328.85015869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVTKYTSSK_	ENSG00000146047|ENST00000274764|H2BC1;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000196890|ENST00000693095|H2BC26;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000436555.1_1_1:228651916-228652012:-|nuORF;nc|ENSG00000203814|Q5QNW6-2|H2BC18;nc|ENSG00000285480|A0A2R8Y619|H2BK1	35.15202426646627	0.4747332964206883	4				NaN	NaN	0	NaN	1742	2359	4102
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4104	15.192	NaN	18394	30	0	6837.9	0.106				-1	GLQHLSPCP	9	62	504.7509151925196	1007.4872774518392	2	504.75054931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GLQHLSPC(Carbamidomethyl (C))P_	ENSG00000159433|ENST00000290607|STARD9	29.14955571784316	0.5308295550522326	4				NaN	NaN	0	NaN	1743	2359	4102
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4105	15.195	NaN	17940	30	0	2337.4	0.106			+	-1	YRQHCFQGTYL	11	80	736.841064401649	1471.6675758700978	2	736.8399658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_YRQHC(Carbamidomethyl (C))FQGTYL_	REV__ENSG00000188107|ENST00000503581|EYS;REV__EYS|p.C952Lfs*2|1|0.27|ENSG00000188107|chr6:64886834-64886835|-/A|frameshift_variant;REV__EYS|p.E1830Rfs*16|1|0.31|ENSG00000188107|chr6:64590379-64590380|-/T|frameshift_variant;REV__EYS|p.F2463Rfs*16|1|0.05|ENSG00000188107|chr6:63806214-63806215|-/AAGACCT|frameshift_variant;REV__EYS|p.G2248Wfs*10|1|0.08|ENSG00000188107|chr6:63999167-63999168|-/A|frameshift_variant;REV__EYS|p.N1413Tfs*15|1|0.21|ENSG00000188107|chr6:64591629-64591629|T/-|frameshift_variant;REV__EYS|p.P1875Lfs*4|1|0.23|ENSG00000188107|chr6:64590243-64590243|G/-|frameshift_variant;REV__nc|ENSG00000188107|Q5T1H1|EYS	30.317721548370564	0.6717830234747728	4				NaN	NaN	0	NaN	1744	2359	4102
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4106	15.196	NaN	10121	30	0	3429.2	0.106			+	22177	KSSNPNDGET	10	61	524.7302183544933	1047.4458837757866	2	525.2322998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KSSNPNDGET_	REV__tr|U7SJL4|U7SJL4_FUSNUMembranefusionproteinbiotin-lipoyllikedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02097PE=3SV=1	33.921630207806714	0.6028135429846169	4				NaN	NaN	0	NaN	1745	2359	4102
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4107	15.198	NaN	8846.7	30	0	1995	0.106			+	-1	MHCSGPSDHP	10	41	570.7144085866402	1139.4142642400802	2	570.7144165039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))HC(Carbamidomethyl (C))SGPSDHP_	REV__ENST00000454738.5_1_7:6456256-6487444:-|nuORF	15.641811463095205	0.7369665665077569	4				NaN	NaN	0	NaN	1746	2359	4102
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4108	15.2	NaN	2031.9	30	0	391.11	0.032	+			1689	AGTLDQPL	8	49	407.7186272674324	813.4227016016648	2	407.71868896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AGTLDQPL_	AGL|p.K1407Nfs*8|1|0.39|ENSG00000162688|chr1:99915441-99915441|A/-|frameshift_variant;AGL|p.N1304Ifs*10|1|0.38|ENSG00000162688|chr1:99912472-99912472|A/-|frameshift_variant;AGL|p.N1304Kfs*7|1|0.38|ENSG00000162688|chr1:99912471-99912472|-/A|frameshift_variant;ENSG00000162688|ENST00000361915|AGL;nc|ENSG00000162688|P35573-2|AGL;nc|ENSG00000162688|P35573-3|AGL	55.50420428727701	0.5462892107279674	4				NaN	NaN	0	NaN	1747	2359	4102
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4109	15.201	NaN	4849.9	30	0	763.01	0.14	+			11585	FPPPSWGGW	9	34	515.7410888671875	NaN	0	515.7410888671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FPPPSWGGW_	ENST00000371753.5_1_9:138902765-138903128:-|nuORF	26.79610172149135	0.34227917631780574	4				NaN	NaN	0	NaN	1748	2359	4102
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4125	15.236	NaN	19966	30	0	1857	0.214	+			6156	AVQEQMRSK	9	79	538.7791929151257	1075.5438328970513	2	538.7796630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVQEQMRSK_	ENSG00000197622|ENST00000357235|CDC42SE1	123.20810148215591	0.019257656778428764	4				NaN	NaN	0	NaN	1761	2362	4124
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4126	15.239	NaN	16685	30	0	2120.6	0.106	+			18960	IVQNGKHFK	9	76	535.8089699049981	1069.603386876796	2	535.8091430664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IVQNGKHFK_	ENSG00000163586|ENST00000295834|FABP1	124.59426212874841	0.018418509520798258	4				NaN	NaN	0	NaN	1762	2362	4124
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4127	15.241	NaN	18066	30	0	3532.2	0.106	+			43621	TINGHNAEVRK	11	86	619.8335309208286	1237.652508908457	2	619.8336791992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TINGHNAEVRK_	ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;ENST00000495810.1_1_7:26235422-26236427:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1	155.47318430680008	6.139824729732389E-05	4				NaN	NaN	0	NaN	1763	2362	4124
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4128	15.243	NaN	8198.2	30	0	2803.7	0.106			+	37481	SLKNHNLR	8	52	327.8576098888924	980.5510002668773	3	327.8577575683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLKNHNLR_	REV__ENSG00000139330|ENST00000266719|KERA;REV__KERA|p.D251Y|1|0.14|ENSG00000139330|chr12:91055531-91055531|C/A|missense_variant	19.359975847455235	0.7988239741663654	4				NaN	NaN	0	NaN	1764	2362	4124
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4129	15.245	NaN	12589	30	0	4708.9	0.106	+			18461	ISEMLRSR	8	57	331.18305069314533	990.527322679636	3	331.1832275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ISEMLRSR_	ENSG00000163945|ENST00000389851|UVSSA;nc|ENSG00000163945|Q2YD98-2|UVSSA	19.359975847455235	0.7988239741663654	4				NaN	NaN	0	NaN	1765	2362	4124
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4130	15.247	NaN	12723	30	0	1786.5	0.036				-1	 	0	78	345.20972760417374	1032.6073534127213	3	345.2098693847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1766	2362	4124
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4131	15.247	NaN	31914	30	0	5991.1	0.139			+	43612	TIMTVTTR	8	91	461.7550711213223	921.4955893094447	2	461.7547302246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TIMTVTTR_	REV__ENSG00000086548|ENST00000199764|CEACAM6	63.30626980617807	0.4690498839812213	4				NaN	NaN	0	NaN	1767	2362	4124
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4147	15.282	NaN	7286.5	30	0	1691.3	0.214	+			26816	LVSSSVHSK	9	61	472.26399874851404	942.5134445638281	2	472.2637634277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LVSSSVHSK_	ENSG00000179604|ENST00000335793|CDC42EP4;nc|ENSG00000179604|Q9H3Q1-2|CDC42EP4	58.22992032128504	0.22837015374068087	4				NaN	NaN	0	NaN	1780	2365	4146
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4148	15.286	NaN	14995	30	0	2284.7	0.106	+			4942	ATQQELRAK	9	73	522.7950861246137	1043.5756193160273	2	522.793701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATQQELRAK_	ENSG00000133392|ENST00000300036|MYH11;nc|ENSG00000133392|P35749-2|MYH11;nc|ENSG00000133392|P35749-3|MYH11;nc|ENSG00000133392|P35749-4|MYH11	152.06079943815163	0.00638878961959199	4				NaN	NaN	0	NaN	1781	2365	4146
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4149	15.288	NaN	1819.5	30	0	420.62	0.106			+	-1	MVFYKWMN	8	41	384.17450290538136	NaN	0	384.1744689941406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Oxidation (M)	_M(Oxidation (M))VFYKWM(Oxidation (M))N_	REV__ENST00000357749.6_1_X:85218995-85233876:-|nuORF	30.503639358989545	1.7418937515398478	4				NaN	NaN	0	NaN	1782	2365	4146
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4150	15.29	NaN	3354.9	30	0	407.78	0.106			+	22860	KVKKEAAP	8	56	435.7736095524232	NaN	0	435.7735900878906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KVKKEAAP_	REV__tr|U7T185|U7T185_FUSNUTriggerfactorOS=FusobacteriumnucleatumCTI-5OX=1316586GN=tigPE=3SV=1	60.29395666154354	1.7418937515398478	4				NaN	NaN	0	NaN	1783	2365	4146
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4151	15.292	NaN	4198.9	30	0	549.59	0.106			+	31756	QPFEFYMFKDE	11	51	494.2182219366048	NaN	0	494.2179870605469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QPFEFYMFKDE_	REV__ENSG00000171862|ENST00000371953|PTEN;REV__ENST00000532280.1_1_9:33675440-33676694:-|nuORF;REV__nc|ENSG00000171862|P60484-2|PTEN;REV__PTEN|p.K267Rfs*9|6|0.32|ENSG00000171862|chr10:87958013-87958013|A/-|frameshift_variant;REV__PTEN|p.N323Kfs*2|1|0.2|ENSG00000171862|chr10:87961054-87961055|-/A|frameshift_variant;REV__PTEN|p.N323Mfs*21|1|0.28|ENSG00000171862|chr10:87961055-87961055|A/-|frameshift_variant;REV__PTEN|p.T350Nfs*11|1|0.35|ENSG00000171862|chr10:87965303-87965304|-/A|frameshift_variant;REV__PTEN|p.Y346Kfs*3|1|0.42|ENSG00000171862|chr10:87965296-87965305|TACTTCACAA/-|frameshift_variant	23.37791116691581	0.456735970842152	4				NaN	NaN	0	NaN	1784	2365	4146
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4152	15.293	NaN	11956	30	0	1997	0.036	+			48868	VVDAHVREK	9	74	526.7961218438951	1051.57769075459	2	526.7960815429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VVDAHVREK_	ENSG00000113595|ENST00000231524|TRIM23;ENST00000508808.1_1_5:64902931-64905219:-|nuORF;nc|ENSG00000113595|P36406-2|TRIM23;nc|ENSG00000113595|P36406-3|TRIM23	76.16968421966216	0.11411088698345859	4				NaN	NaN	0	NaN	1785	2365	4146
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4153	15.294	NaN	1421.2	30	0	410.11	0.139	+			12981	GETPIHKA	8	34	426.7321472167969	NaN	0	426.7321472167969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GETPIHKA_	ENSG00000088448|ENST00000267339|ANKRD10;ENST00000460846.1_1_13:111557570-111567134:-|nuORF;ENST00000489973.6_1_13:111546697-111563006:-|nuORF;nc|ENSG00000088448|Q9NXR5-2|ANKRD10	45.9519527083369	1.7418937515398478	4				NaN	NaN	0	NaN	1786	2365	4146
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4171	15.333	NaN	20926	30	0	2712.3	0.214			+	16022	HATALGYRK	9	77	508.7856931209829	1015.5568333087658	2	508.78558349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HATALGYRK_	REV__ENSG00000142197|ENST00000691173|DOP1B;REV__nc|ENSG00000142197|Q9Y3R5-2|DOP1B	76.7741389293348	0.11149722112137898	4				NaN	NaN	0	NaN	1801	2368	4170
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4172	15.336	NaN	11676	30	0	1674.4	0.106			+	10442	EVLKVEANH	9	51	519.780368897366	1037.5461848615319	2	519.7798461914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EVLKVEANH_	REV__NRK|p.D195Efs*12|1|0.15|ENSG00000123572|chrX:105898587-105898588|-/G|frameshift_variant	29.14955571784316	0.5308295550522326	4				NaN	NaN	0	NaN	1802	2368	4170
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4173	15.338	NaN	2230.4	30	0	368.19	0.106			+	39028	SSSKSSTP	8	41	390.6902830054593	NaN	0	390.6903381347656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSSKSSTP_	REV__EIF2AK3|p.D965Gfs*7|1|0.04|ENSG00000172071|chr2:88570965-88570966|-/GTTTTCATTAAAATAC|frameshift_variant;REV__ENSG00000172071|ENST00000303236|EIF2AK3	17.364965105453717	1.7418937515398478	4				NaN	NaN	0	NaN	1803	2368	4170
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4174	15.34	NaN	9872.3	30	0	953.25	0.106	+			41767	SVSNMVHTAK	10	74	545.2720150761847	NaN	0	545.2718505859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_SVSNM(Oxidation (M))VHTAK_	ENSG00000115839|ENST00000264158|RAB3GAP1;nc|ENSG00000115839|Q15042-3|RAB3GAP1;nc|ENSG00000115839|Q15042-4|RAB3GAP1	63.42647028704847	0.20629711391763655	4				NaN	NaN	0	NaN	1804	2368	4170
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4175	15.342	NaN	6746.3	30	0	1495.1	0.106				-1	QAREDVIHM	9	61	557.7697636053647	1113.5249742775293	2	558.3121948242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_QAREDVIHM(Oxidation (M))_	ENSG00000118407|ENST00000237172|FILIP1;FILIP1|p.I519*|1|0.32|ENSG00000118407|chr6:75314277-75314277|T/-|frameshift_variant;nc|ENSG00000118407|Q7Z7B0-2|FILIP1	37.15910966729921	0.4535818937225704	4				NaN	NaN	0	NaN	1805	2368	4170
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4176	15.344	NaN	5669	30	0	1177.1	0.037				-1	MCCTSAQKKI	10	40	564.7649507572145	1127.5153485812289	2	564.2860717773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_M(Oxidation (M))CCTSAQKKI_	ENST00000296490.7_1_3:52291276-52291372:-|nuORF	19.996771675451527	0.7148376616046445	4				NaN	NaN	0	NaN	1806	2368	4170
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4177	15.344	NaN	6779.6	30	0	1365	0.14			+	21762	KQQQQRIE	8	59	529.2904503024114	1056.5663476716227	2	529.291259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KQQQQRIE_	REV__ENSG00000170310|ENST00000306357|STX8;REV__STX8|p.K196Nfs*9|1|0.36|ENSG00000170310|chr17:9378607-9378607|T/-|frameshift_variant	28.2542754592877	0.7411748056684583	4				NaN	NaN	0	NaN	1807	2368	4170
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4193	15.379	NaN	206940	30	0	31101	0.185	+			40380	STTTTTHITK	10	116	545.7902793345999	1089.5660057359996	2	545.7907104492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STTTTTHITK_	ENSG00000079819|ENST00000337057|EPB41L2;ENSG00000082397|ENST00000341928|EPB41L3;ENST00000368126.2_1_6:131179278-131186801:-|nuORF;ENST00000452150.6_1_6:131179278-131188835:-|nuORF;nc|ENSG00000079819|O43491-3|EPB41L2;nc|ENSG00000079819|O43491-4|EPB41L2;nc|ENSG00000082397|Q9Y2J2-2|EPB41L3;nc|ENSG00000082397|Q9Y2J2-4|EPB41L3	140.11223852658463	0.010724162804194332	4				NaN	NaN	0	NaN	1820	2371	4192
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4194	15.382	NaN	28287	30	0	5700.1	0.106			+	-1	KEEHIWIC	8	64	557.7697636053647	1113.5249742775293	2	557.770263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_KEEHIWIC(Carbamidomethyl (C))_	REV__ENST00000404739.7_1_10:104848962-104849268:-|nuORF	33.51558372728122	0.7005509609380386	4				NaN	NaN	0	NaN	1821	2371	4192
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4195	15.384	NaN	10417	30	0	1482.3	0.106	+			8979	EFMKTLEK	8	67	513.270099269811	1024.525645606422	2	512.7717895507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EFMKTLEK_	ENSG00000174839|ENST00000311128|DENND6A	65.46538089061403	0.44767499471257033	4				NaN	NaN	0	NaN	1822	2371	4192
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4196	15.386	NaN	22841	30	0	3488.3	0.106	+			35643	SCIWAACTVSG	11	70	577.7497327317272	1153.4849125302544	2	577.7481079101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_SC(Carbamidomethyl (C))IWAACTVSG_	ENSG00000166603|ENST00000299766|MC4R	44.377184641726394	0.49804979881800077	4				NaN	NaN	0	NaN	1823	2371	4192
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4197	15.387	NaN	3568	30	0	1205.4	0.106			+	13921	GRNSYDMP	8	31	470.20362294233234	938.3926929514647	2	470.2032470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GRNSYDMP_	REV__ADNP2|p.K1045Nfs*29|1|0.42|ENSG00000101544|chr18:80138543-80138543|A/-|frameshift_variant;REV__ENSG00000101544|ENST00000262198|ADNP2	16.473147378115264	0.7942579620968672	4				NaN	NaN	0	NaN	1824	2371	4192
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4198	15.389	NaN	4636.5	30	0	2191.1	0.106	+			39589	STGRPLGTTK	10	47	339.8608400630608	1016.5606907893823	3	339.86102294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STGRPLGTTK_	ENSG00000181904|ENST00000394976|C5orf24;nc|nan|Q7Z6I8-2|C5orf24	28.081489160057373	0.6505064946289502	4				NaN	NaN	0	NaN	1825	2371	4192
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4199	15.391	NaN	4310.3	30	0	643.9	0.036			+	9482	EKRLHATEA	9	58	527.7855224609375	NaN	0	527.7855224609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EKRLHATEA_	REV__ENSG00000196367|ENST00000456197|TRRAP;REV__nc|ENSG00000196367|Q9Y4A5-2|TRRAP;REV__nc|ENSG00000196367|Q9Y4A5|TRRAP;REV__TRRAP-ASNS|1|fusion;REV__TRRAP-ASNS|2|fusion;REV__TRRAP|p.A1620Cfs*35|1|0.27|ENSG00000196367|chr7:98949499-98949500|-/G|frameshift_variant;REV__TRRAP|p.I564Hfs*9|1|0.29|ENSG00000196367|chr7:98910389-98910390|-/G|frameshift_variant;REV__TRRAP|p.K3443Sfs*19|1|0.28|ENSG00000196367|chr7:99004246-99004246|A/-|frameshift_variant;REV__TRRAP|p.P1292Lfs*17|1|0.44|ENSG00000196367|chr7:98933258-98933258|C/-|frameshift_variant;REV__TRRAP|p.P1360Afs*14|1|0.05|ENSG00000196367|chr7:98935641-98935642|-/GCAAATAA|frameshift_variant	49.44154591367651	0.21054156626303966	4				NaN	NaN	0	NaN	1826	2371	4192
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4217	15.427	NaN	38698	30	0	3527.8	0.199	+			39560	STGGRTTITTK	11	90	561.8099541554001	1121.6053553776	2	561.81005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STGGRTTITTK_	ENSG00000124429|ENST00000262753|POF1B;nc|ENSG00000124429|Q8WVV4-1|POF1B	68.62578634547417	0.24719609611953774	4				NaN	NaN	0	NaN	1841	2374	4216
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4218	15.43	NaN	6393	30	0	1511.8	0.106	+			41358	SVMAQVRQK	9	58	531.7896318094957	1061.5647106857914	2	531.7896728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_SVM(Oxidation (M))AQVRQK_	ENSG00000038358|ENST00000358933|EDC4;ENST00000572067.1_1_16:67917790-67918048:+|nuORF;nc|ENSG00000038358|Q6P2E9-2|EDC4	68.78682469695295	0.14603441672067394	4				NaN	NaN	0	NaN	1842	2374	4216
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4219	15.434	NaN	8407.2	30	0	1548.3	0.106	+			41818	SVSSPVKSK	9	71	459.76650503143645	917.5184571296729	2	459.7658996582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVSSPVKSK_	ENSG00000174197|ENST00000703841|MGA;MGA|p.D2578Rfs*45|1|0.32|ENSG00000174197|chr15:41762342-41762343|-/A|frameshift_variant;MGA|p.E1249Rfs*25|2|0.28|ENSG00000174197|chr15:41729243-41729244|-/A|frameshift_variant;MGA|p.E1249Rfs*42|1|0.17|ENSG00000174197|chr15:41729244-41729244|A/-|frameshift_variant;MGA|p.H151Pfs*66|1|0.03|ENSG00000174197|chr15:41669345-41669346|-/CA|frameshift_variant;MGA|p.H151Vfs*67|1|0.05|ENSG00000174197|chr15:41669343-41669344|-/TGTTA|frameshift_variant;MGA|p.L1297Wfs*39|1|0.3|ENSG00000174197|chr15:41734566-41734566|C/-|frameshift_variant;MGA|p.N416Vfs*7|1|0.13|ENSG00000174197|chr15:41696254-41696257|CAAA/-|frameshift_variant;MGA|p.R155Efs*24|1|0.31|ENSG00000174197|chr15:41669352-41669353|-/G|frameshift_variant;MGA|p.R614Efs*7|1|0.35|ENSG00000174197|chr15:41696846-41696846|A/-|frameshift_variant;MGA|p.S2228Kfs*5|1|0.33|ENSG00000174197|chr15:41750284-41750285|-/A|frameshift_variant;MGA|p.T1916Qfs*7|1|0.4|ENSG00000174197|chr15:41749350-41749350|A/-|frameshift_variant;nc|ENSG00000174197|Q8IWI9-3|MGA;nc|ENSG00000174197|Q8IWI9|MGA	88.17693792209575	0.07000514020414955	4				NaN	NaN	0	NaN	1843	2374	4216
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4220	15.436	NaN	4510.9	30	0	483.9	0.106	+			14250	GSSSVAAMKK	10	62	483.25783809537336	964.5011232575467	2	483.2574768066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GSSSVAAMKK_	ENSG00000174021|ENST00000370645|GNG5;GNG5-NMI|1|fusion	65.46538089061403	0.31613324008013116	4				NaN	NaN	0	NaN	1844	2374	4216
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4221	15.438	NaN	5917.4	30	0	1303.5	0.037				-1	RKCCYLHC	8	45	570.2503731153654	1138.4861932975307	2	570.2503051757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C)	_RKC(Carbamidomethyl (C))C(Carbamidomethyl (C))YLHC_	ENSG00000168703|ENST00000372785|WFDC12	21.70233525837049	0.7917639344264583	4				NaN	NaN	0	NaN	1845	2374	4216
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4222	15.439	NaN	7502.7	30	0	1213.2	0.142			+	30249	PSWGEPCAQTA	11	51	573.7483346351709	1145.4821163371416	2	573.7890014648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PSWGEPCAQTA_	REV__ENSG00000082684|ENST00000357599|SEMA5B;REV__nc|ENSG00000082684|Q9P283-4|SEMA5B	23.52269567125451	0.7430573033454468	4				NaN	NaN	0	NaN	1846	2374	4216
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4239	15.477	NaN	15699	30	0	3057.8	0.214	+			44594	TTCSKVFKK	9	74	549.8026017208723	1097.5906505085445	2	549.8028564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_TTC(Carbamidomethyl (C))SKVFKK_	ENSG00000167625|ENST00000301215|ZNF526	131.03138772384656	0.014687601201650916	4				NaN	NaN	0	NaN	1860	2377	4238
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4240	15.481	NaN	190490	30	0	36628	0.106	+			43533	TGVKELAQR	9	107	334.5293271585418	1000.5661520758254	3	334.5295715332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TGVKELAQR_	ENSG00000197969|ENST00000360280|VPS13A;nc|ENSG00000197969|Q96RL7-2|VPS13A;nc|ENSG00000197969|Q96RL7-3|VPS13A;nc|ENSG00000197969|Q96RL7-4|VPS13A;VPS13A|p.I1709Nfs*6|1|0.34|ENSG00000197969|chr9:77318397-77318398|-/A|frameshift_variant;VPS13A|p.M1697Cfs*13|1|0.07|ENSG00000197969|chr9:77318363-77318363|A/-|frameshift_variant;VPS13A|p.N2071Tfs*18|2|0.32|ENSG00000197969|chr9:77337367-77337367|A/-|frameshift_variant;VPS13A|p.Y2315Ifs*2|1|0.09|ENSG00000197969|chr9:77340463-77340463|T/-|frameshift_variant	63.53385203322761	0.18415635464017938	4				NaN	NaN	0	NaN	1861	2377	4238
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4241	15.483	NaN	4870.2	30	0	1020.2	0.106			+	-1	LGGGLQICAQ	10	61	508.7634270751057	1015.5123012170114	2	508.7633361816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LGGGLQIC(Carbamidomethyl (C))AQ_	REV__ENSG00000198753|ENST00000361971|PLXNB3;REV__nc|ENSG00000198753|Q9ULL4-2|PLXNB3;REV__PLXNB3|p.G1176Afs*22|1|0.15|ENSG00000198753|chrX:153774191-153774191|G/-|frameshift_variant;REV__PLXNB3|p.V1655Cfs*7|1|0.56|ENSG00000198753|chrX:153777236-153777236|G/-|frameshift_variant	51.33545320467046	0.4446945571623749	4				NaN	NaN	0	NaN	1862	2377	4238
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4242	15.485	NaN	69567	30	0	15805	0.106				-1	KMCSMIKK	8	64	513.270099269811	1024.525645606422	2	513.269775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_KMC(Carbamidomethyl (C))SMIKK_	ENST00000443616.1_1_1:119669528-119669630:-|nuORF	57.81127852772723	0.5234495074909924	4				NaN	NaN	0	NaN	1863	2377	4238
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4243	15.487	NaN	29716	30	0	6347.8	0.106			+	36711	SGSTEWRPTT	10	61	561.2624366803502	1120.5103204275003	2	561.7817993164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SGSTEWRPTT_	REV__ENST00000485344.6_1_2:240900539-240929534:-|nuORF	25.57405402267927	0.6709832231498071	4				NaN	NaN	0	NaN	1864	2377	4238
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4244	15.488	NaN	2852.8	30	0	614.22	0.035				-1	 	0	55	331.0021048673284	NaN	0	331.1976013183594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1865	2377	4238
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4245	15.489	NaN	18089	30	0	4835.3	0.142	+			27746	MQNMSIHTK	9	68	553.2604345805088	1104.5063162278175	2	553.2606201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_MQNM(Oxidation (M))SIHTK_	CON__H-INV:HIT000292931;CON__P05787;CON__REFSEQ:XP_092267;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	140.11223852658463	0.010427410095706195	4				NaN	NaN	0	NaN	1866	2377	4238
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4263	15.527	NaN	23379	30	0	10150	0.214				-1	STSQCKFFC	9	52	554.2330467898603	1106.4515406465205	2	554.2329711914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_STSQC(Carbamidomethyl (C))KFFC_	ENSG00000106692|ENST00000357998|FKTN;FKTN|p.F369Sfs*37|2|0.32|ENSG00000106692|chr9:105619989-105619989|T/-|frameshift_variant;nc|ENSG00000106692|O75072-2|FKTN	29.14955571784316	0.5308295550522326	4				NaN	NaN	0	NaN	1881	2380	4262
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4264	15.531	NaN	21652	30	0	5684.5	0.106			+	9015	EGARRTEVQ	9	55	523.2726320418864	1044.5307111505726	2	523.2726440429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EGARRTEVQ_	REV__ENSG00000196218|ENST00000359596|RYR1;REV__nc|ENSG00000196218|P21817-2|RYR1;REV__nc|ENSG00000196218|P21817-3|RYR1;REV__RYR1|p.D2713Tfs*33|1|0.11|ENSG00000196218|chr19:38504811-38504811|C/-|frameshift_variant;REV__RYR1|p.P3303Tfs*8|1|0.36|ENSG00000196218|chr19:38517571-38517572|-/C|frameshift_variant	34.172542307311794	0.4838870758800184	4				NaN	NaN	0	NaN	1882	2380	4262
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4265	15.533	NaN	18711	30	0	4622.6	0.106			+	30765	QDQFCLQK	8	66	533.7525649148423	1065.4905768964845	2	533.7520751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_QDQFC(Carbamidomethyl (C))LQK_	REV__ENSG00000082516|ENST00000285873|GEMIN5	58.78195531508484	0.5138399468736706	4				NaN	NaN	0	NaN	1883	2380	4262
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4266	15.535	NaN	6833.9	30	0	1164.7	0.106			+	45273	TVQPQRALA	9	75	328.5258810948699	982.5558138848096	3	328.5259704589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TVQPQRALA_	REV__CCNO|p.V265Wfs*4|1|0.14|ENSG00000152669|chr5:55231635-55231635|C/-|frameshift_variant;REV__ENSG00000152669|ENST00000282572|CCNO	26.69291269510374	0.5537881896960711	4				NaN	NaN	0	NaN	1884	2380	4262
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4267	15.537	NaN	14398	30	0	2405.9	0.106				-1	GNCSQCVCEK	10	55	621.2367905247746	NaN	0	621.236572265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	3 Carbamidomethyl (C)	_GNC(Carbamidomethyl (C))SQC(Carbamidomethyl (C))VC(Carbamidomethyl (C))EK_	nc|ENSG00000197558|A2VEC9|SSPOP	22.579656572578934	0.4201028297492154	4				NaN	NaN	0	NaN	1885	2380	4262
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4268	15.539	NaN	14208	30	0	9553.5	0.032				-1	 	0	36	413.22662552958815	824.4386981259763	2	413.2268371582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1886	2380	4262
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4269	15.539	NaN	5330.2	30	0	633	0.14				-1	ETDQDCSM	8	61	501.16444550133576	NaN	0	500.7928771972656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C),Oxidation (M)	_ETDQDC(Carbamidomethyl (C))SM(Oxidation (M))_	ADAMTS9|p.S1884Ffs*2|1|0.35|ENSG00000163638|chr3:64533233-64533233|G/-|frameshift_variant;ENSG00000163638|ENST00000498707|ADAMTS9;ENST00000482490.5_1_3:64536549-64672246:-|nuORF;nc|ENSG00000163638|Q9P2N4-1|ADAMTS9;nc|ENSG00000163638|Q9P2N4-4|ADAMTS9	26.79610172149135	1.7418937515398478	4				NaN	NaN	0	NaN	1887	2380	4262
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4287	15.577	NaN	51071	30	0	9401.7	0.214	+			41332	SVLSGGKAK	9	75	423.7555837560537	NaN	0	423.7555847167969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVLSGGKAK_	ENSG00000130429|ENST00000646101|ARPC1B;ENST00000491294.1_1_7:98988810-98991817:+|nuORF	131.03138772384656	0.00042866051192282686	4				NaN	NaN	0	NaN	1902	2383	4286
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4288	15.581	NaN	9290.3	30	0	1644.4	0.106	+			14336	GSYVTHETK	9	63	511.2512533463567	1020.4879537595134	2	511.2509460449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSYVTHETK_	ENSG00000088986|ENST00000242577|DYNLL1;ENSG00000264364|ENST00000579991|DYNLL2;ENST00000552316.1_1_12:120935833-120936010:+|nuORF	120.30596017624542	0.02101454110788768	4				NaN	NaN	0	NaN	1903	2383	4286
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4289	15.583	NaN	5298.2	30	0	686.03	0.106	+			40497	STYGVTKGK	9	58	470.75857312904964	939.5025933248993	2	470.75823974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STYGVTKGK_	ENSG00000214753|ENST00000301785|HNRNPUL2	112.41091882917199	0.026537921851008135	4				NaN	NaN	0	NaN	1904	2383	4286
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4290	15.585	NaN	8219.1	30	0	1813.6	0.106	+			5172	ATTEYVQKK	9	69	534.2901700169164	NaN	0	534.2901000976562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATTEYVQKK_	ENSG00000130957|ENST00000375337|FBP2	82.24051045832904	0.06370642293906256	4				NaN	NaN	0	NaN	1905	2383	4286
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4291	15.586	NaN	7856.4	30	0	1347	0.106	+			31214	QGSASSHNSAS	11	62	516.7219682296665	1031.4293835261328	2	516.7216186523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QGSASSHNSAS_	ENSG00000100354|ENST00000454349|TNRC6B;nc|ENSG00000100354|Q9UPQ9-1|TNRC6B;nc|ENSG00000100354|Q9UPQ9-2|TNRC6B;TNRC6B|p.A1354Tfs*46|1|0.47|ENSG00000100354|chr22:40301265-40301266|-/ACCCAAC|frameshift_variant;TNRC6B|p.G1342Wfs*56|1|0.32|ENSG00000100354|chr22:40301234-40301235|-/T|frameshift_variant	44.377184641726394	0.49804979881800077	4				NaN	NaN	0	NaN	1906	2383	4286
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4292	15.588	NaN	3650.5	30	0	668.47	0.034			+	6714	CAAVQNCKK	9	44	482.7375369563201	963.4605209794403	2	482.7371826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_CAAVQNCKK_	REV__ENSG00000005436|ENST00000321027|GCFC2;REV__GCFC2|p.W710Mfs*3|1|0.22|ENSG00000005436|chr2:75666029-75666030|-/T|frameshift_variant;REV__nc|ENSG00000005436|P16383-2|GCFC2	23.04248740728303	0.5879033540491928	4				NaN	NaN	0	NaN	1907	2383	4286
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4293	15.589	NaN	14306	30	0	3226.5	0.138	+			27307	MGSWGVGR	8	55	425.2056306365403	848.3967083398807	2	425.2058410644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MGSWGVGR_	ENST00000590504.1_1_X:47518288-47518834:+|nuORF;ENST00000591832.1_1_X:47518288-47519317:+|nuORF	31.954861631926434	0.7126016770032289	4				NaN	NaN	0	NaN	1908	2383	4286
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4311	15.628	NaN	24419	30	0	2956.9	0.214				-1	 	0	81	517.2676115144255	1032.520670095651	2	517.2673950195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1923	2386	4310
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4312	15.631	NaN	8911.9	30	0	1983.4	0.106			+	32835	RCMFCRNK	8	39	529.2484279930794	1056.4823030529587	2	529.2466430664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RCMFCRNK_	REV__ENSG00000086666|ENST00000261749|ZFAND6;REV__ENSG00000107372|ENST00000376962|ZFAND5;REV__ENST00000557983.1_1_15:80423514-80429967:+|nuORF;REV__nc|ENSG00000086666|Q6FIF0-2|ZFAND6	25.450171626174864	0.7628259754767981	4				NaN	NaN	0	NaN	1924	2386	4310
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4313	15.633	NaN	2341.6	30	0	825.12	0.106			+	-1	VSVAIVVVMP	10	53	343.8731947978374	NaN	0	343.8731994628906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_VSVAIVVVM(Oxidation (M))P_	REV__ENSG00000196576|ENST00000359337|PLXNB2;REV__ENST00000479701.5_1_22:50714135-50720918:-|nuORF;REV__PLXNB2|p.L1362Rfs*32|1|0.1|ENSG00000196576|chr22:50280578-50280579|CA/-|frameshift_variant	22.579656572578934	0.4201028297492154	4				NaN	NaN	0	NaN	1925	2386	4310
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4314	15.635	NaN	5754.5	30	0	791.35	0.106	+			32900	RDRGCGRAL	9	64	502.2656509761219	NaN	0	502.2586975097656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RDRGCGRAL_	ENST00000348520.10_2_14:104175690-104176350:+|nuORF	39.252832667884924	0.27938773122138094	4				NaN	NaN	0	NaN	1926	2386	4310
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4315	15.637	NaN	7424.4	30	0	500.38	0.106				-1	 	0	82	828.2995218433555	1654.5844907535109	2	828.2980346679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1927	2386	4310
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4316	15.639	NaN	2894	30	0	344.93	0.035				-1	VAVRPECR	8	54	329.51127100074797	985.5119836024439	3	329.54998779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_VAVRPEC(Carbamidomethyl (C))R_	ENST00000591380.1_1_19:37960280-37960391:+|nuORF	24.20275056022122	0.7724576178584145	4				NaN	NaN	0	NaN	1928	2386	4310
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4317	15.64	NaN	4024.1	30	0	930.55	0.141				-1	DPGVKKCGTL	10	43	537.785888671875	NaN	0	537.785888671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_DPGVKKC(Carbamidomethyl (C))GTL_	ENSG00000165868|ENST00000369209|HSPA12A;HSPA12A|p.D650Tfs*11|1|0.25|ENSG00000165868|chr10:116674861-116674861|C/-|frameshift_variant	20.94693142431847	0.4201028297492154	4				NaN	NaN	0	NaN	1929	2386	4310
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4335	15.679	NaN	22243	30	0	4325.5	0.214	+			38218	SQGPISKPK	9	87	471.2745177844741	940.5344826357482	2	471.274169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SQGPISKPK_	BRD2|p.G595Vfs*6|1|0.59|ENSG00000204256|chr6:32978327-32978327|G/-|frameshift_variant;ENSG00000204256|ENST00000374825|BRD2;ENST00000463639.1_1_6:32945329-32946166:+|nuORF;nc|ENSG00000204256|P25440-2|BRD2;nc|ENSG00000204256|P25440-3|BRD2;nc|ENSG00000204256|P25440-4|BRD2	123.20810148215591	0.019257656778428764	4				NaN	NaN	0	NaN	1944	2389	4334
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4336	15.683	NaN	27252	30	0	5366.1	0.106	+			13101	GGAESHTFK	9	89	467.22520127935474	932.4358496255095	2	467.2246398925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GGAESHTFK_	ENSG00000213145|ENST00000392531|CRIP1;ENST00000460900.1_1_14:105954779-105954845:+|nuORF;ENST00000496700.5_1_14:105954601-105954845:+|nuORF	127.46168284122857	0.016682644177004526	4				NaN	NaN	0	NaN	1945	2389	4334
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4337	15.685	NaN	153010	30	0	37371	0.106	+			6240	AVSEGTKAVTK	11	112	545.8084571387728	1089.6023613443456	2	545.8090209960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVSEGTKAVTK_	ENSG00000124635|ENST00000339812|H2BC11;ENSG00000146047|ENST00000274764|H2BC1;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000196890|ENST00000693095|H2BC26;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000369385.5_1_1:149814898-149814982:+|nuORF;ENST00000436555.1_1_1:228651916-228652012:-|nuORF;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;nc|ENSG00000203814|Q5QNW6-2|H2BC18;nc|ENSG00000285480|A0A2R8Y619|H2BK1	188.9123650225555	2.265499584896125E-06	4				NaN	NaN	0	NaN	1946	2389	4334
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4338	15.687	NaN	6572.2	30	0	1646	0.106			+	-1	TPMDGTAASLQ	11	57	554.2549859286244	1106.4954189240486	2	554.254638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_TPM(Oxidation (M))DGTAASLQ_	REV__nc|ENSG00000095794|Q03060-24|CREM;REV__nc|ENSG00000095794|Q03060-27|CREM	40.05817265558897	0.5571470695993369	4				NaN	NaN	0	NaN	1947	2389	4334
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4339	15.689	NaN	988.44	30	0	156.14	0.106			+	16740	HLPGAPSP	8	27	388.20831484014576	774.4020767470915	2	388.20843505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HLPGAPSP_	REV__ENSG00000092067|ENST00000206513|CEBPE	8.822329726475273	0.7821568878176242	4				NaN	NaN	0	NaN	1948	2389	4334
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4340	15.69	NaN	11750	30	0	1882	0.035			+	21734	KQLNEIQQ	8	80	500.77584941673643	999.5371459002729	2	500.7772521972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KQLNEIQQ_	REV__CEP128|p.R543Q|1|0.42|ENSG00000100629|chr14:80785478-80785478|C/T|missense_variant	71.87747018426188	0.391254423828572	4				NaN	NaN	0	NaN	1949	2389	4334
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4341	15.691	NaN	8630.6	30	0	1345.9	0.141	+			18307	IPSEHWNKT	9	67	556.2788696289062	NaN	0	556.2788696289062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IPSEHWNKT_	L1PB1_dup5905|chr7:93807211-93809400:+|2.023350116566841|0.2056128638309657|3.3|382.0|54|3|sense	32.81241826257853	0.3119040447479903	4				NaN	NaN	0	NaN	1950	2389	4334
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4359	15.729	NaN	37119	30	0	10503	0.214				-1	 	0	71	557.7885043300467	1113.5624557268934	2	557.7883911132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1965	2392	4358
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4360	15.733	NaN	66749	30	0	12637	0.106				-1	 	0	108	685.3095555047568	1368.6045580763134	2	685.3084716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	1966	2392	4358
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4361	15.735	NaN	12312	30	0	6393.5	0.106			+	-1	QDSSLCCSSPL	11	58	598.7512124281477	NaN	0	598.7511596679688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_QDSSLC(Carbamidomethyl (C))CSSPL_	REV__ENST00000522468.1_1_8:28921445-28921885:+|nuORF	21.68575002086885	0.456735970842152	4				NaN	NaN	0	NaN	1967	2392	4358
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4362	15.737	NaN	78982	30	0	5727.9	0.106			+	7030	CSKWYTKCNCT	11	101	697.2889881086845	1392.563423284169	2	697.2879028320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_CSKWYTKC(Carbamidomethyl (C))NCT_	REV__ENSG00000102891|ENST00000219162|MT4	59.93077597824379	0.32407304095777845	4				NaN	NaN	0	NaN	1968	2392	4358
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4363	15.739	NaN	16164	30	0	2185.7	0.106			+	-1	GERGSCWTFMG	11	57	623.7515558047938	NaN	0	623.7516479492188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_GERGSCWTFM(Oxidation (M))G_	REV__ENST00000405201.5_1_12:124809557-124809872:-|nuORF	22.579656572578934	0.456735970842152	4				NaN	NaN	0	NaN	1969	2392	4358
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4364	15.74	NaN	9826.2	30	0	2035.9	0.037	+			26988	LYMLMEACLG	10	63	572.2653054149818	NaN	0	572.2653198242188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LYMLMEACLG_	ENSG00000185532|ENST00000373980|PRKG1;ENST00000373975.2_1_10:53822369-54053657:+|nuORF;nc|ENSG00000185532|Q13976-3|PRKG1;nc|ENSG00000185532|Q13976|PRKG1	20.94693142431847	0.4201028297492154	4				NaN	NaN	0	NaN	1970	2392	4358
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4365	15.741	NaN	11011	30	0	3295.3	0.142			+	8938	EEYAREETK	9	62	577.7677942275915	1153.5210355219829	2	578.2698974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EEYAREETK_	REV__ENST00000563850.1_1_16:77896662-77916077:+|nuORF	19.1035232394073	0.6112419832031293	4				NaN	NaN	0	NaN	1971	2392	4358
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4383	15.779	NaN	16796	30	0	4977.1	0.214	+			47799	VSIGDPKKK	9	75	486.2981295152644	970.5817060973288	2	486.29779052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSIGDPKKK_	ENSG00000180370|ENST00000327134|PAK2;ENST00000556425.2_1_15:21937379-21938108:-|nuORF;PAK2|p.R488Gfs*13|1|0.32|ENSG00000180370|chr3:196827302-196827302|A/-|frameshift_variant;PAK2|p.S330Hfs*6|1|0.39|ENSG00000180370|chr3:196814497-196814497|G/-|frameshift_variant;PAK2|p.S371Vfs*67|1|0.31|ENSG00000180370|chr3:196818111-196818111|A/-|frameshift_variant	112.41091882917199	0.026537921851008135	4				NaN	NaN	0	NaN	1986	2395	4382
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4384	15.783	NaN	14013	30	0	1855.7	0.106				-1	TNTVFDCYQCC	11	74	734.2688598632812	NaN	0	734.2688598632812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	3 Carbamidomethyl (C)	_TNTVFDC(Carbamidomethyl (C))YQC(Carbamidomethyl (C))C(Carbamidomethyl (C))_	ENST00000532167.5_1_11:122930938-122932032:-|nuORF	12.811709888998246	0.456735970842152	4				NaN	NaN	0	NaN	1987	2395	4382
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4385	15.785	NaN	7655.6	30	0	1310.1	0.106				-1	TSLKSIMKK	9	64	526.3128659549802	NaN	0	526.31298828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_TSLKSIM(Oxidation (M))KK_	ENSG00000132854|ENST00000371153|KANK4;nc|ENSG00000132854|Q5T7N3-2|KANK4	60.11826168202944	0.14881452885248947	4				NaN	NaN	0	NaN	1988	2395	4382
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4386	15.787	NaN	15252	30	0	1986.3	0.106			+	-1	ENLNMDEMMKE	11	83	708.2772827148438	NaN	0	708.2772827148438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Oxidation (M)	_ENLNMDEM(Oxidation (M))M(Oxidation (M))KE_	REV__DIAPH2|p.Q221Tfs*6|1|0.11|ENSG00000147202|chrX:96912394-96912395|-/A|frameshift_variant;REV__ENSG00000139734|ENST00000400324|DIAPH3;REV__ENSG00000147202|ENST00000324765|DIAPH2;REV__nc|ENSG00000139734|Q9NSV4-4|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-7|DIAPH3;REV__nc|ENSG00000147202|O60879-2|DIAPH2;REV__nc|ENSG00000147202|O60879-3|DIAPH2	22.579656572578934	0.456735970842152	4				NaN	NaN	0	NaN	1989	2395	4382
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4387	15.788	NaN	13216	30	0	1018.6	0.106				-1	QSCLCCCCYQS	11	84	763.2514038085938	NaN	0	763.2514038085938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	5 Carbamidomethyl (C)	_QSC(Carbamidomethyl (C))LC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))YQS_	ENSG00000151617|ENST00000651419|EDNRA;nc|ENSG00000151617|P25101-4|EDNRA;nc|ENSG00000151617|P25101-5|EDNRA	4.612557629759915	0.456735970842152	4				NaN	NaN	0	NaN	1990	2395	4382
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4388	15.79	NaN	4728.1	30	0	649.76	0.037	+			39891	STLRQKIRK	9	60	377.2434594118702	1128.7085488358107	3	377.2435607910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STLRQKIRK_	ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;nc|ENSG00000184110|Q99613-2|EIF3C	37.81151784470057	0.4459294069877048	4				NaN	NaN	0	NaN	1991	2395	4382
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4389	15.791	NaN	54362	30	0	6498.5	0.141	+			40792	SVDQAGKYSK	10	92	541.7775612163533	1081.5405694995065	2	541.7778930664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVDQAGKYSK_	ENSG00000124383|ENST00000244230|MPHOSPH10	175.3250769318428	0.0019924018525480686	4				NaN	NaN	0	NaN	1992	2395	4382
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4406	15.828	NaN	13575	30	0	2644.3	0.213			+	17167	HTLHDFHRR	9	83	609.8148813969156	1217.615209860631	2	609.8150634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HTLHDFHRR_	REV__ENST00000431285.5_1_3:9471730-9475177:+|nuORF	42.86426827375447	0.38666266728046506	4				NaN	NaN	0	NaN	2006	2398	4405
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4407	15.831	NaN	6291.3	30	0	1240.2	0.106			+	28275	NEADVDMDAN	10	72	547.2101335520974	1092.4057141709948	2	547.210205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NEADVDMDAN_	REV__nc|ENSG00000153130|Q9UIL1-3|SCOC	45.02220120713402	0.5028680121232791	4				NaN	NaN	0	NaN	2007	2398	4405
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4408	15.834	NaN	6051.6	30	0	1570.2	0.106			+	19978	KEHISKFAQG	10	59	572.81103515625	NaN	0	572.81103515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEHISKFAQG_	REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-10|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-13|TTN;REV__nc|ENSG00000155657|Q8WZ42-2|TTN;REV__nc|ENSG00000155657|Q8WZ42-3|TTN;REV__nc|ENSG00000155657|Q8WZ42-4|TTN;REV__nc|ENSG00000155657|Q8WZ42-5|TTN;REV__nc|ENSG00000155657|Q8WZ42-7|TTN;REV__nc|ENSG00000155657|Q8WZ42-8|TTN;REV__nc|ENSG00000155657|Q8WZ42-9|TTN;REV__nc|ENSG00000155657|Q8WZ42|TTN;REV__TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant	42.33807565288922	0.3540422799631949	4				NaN	NaN	0	NaN	2008	2398	4405
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4409	15.835	NaN	4297.4	30	0	955.37	0.106	+			32861	RDCAVKPCQS	10	50	553.7572511494936	NaN	0	553.7571411132812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RDCAVKPCQS_	ENSG00000197930|ENST00000395686|ERO1A	27.047317107675042	0.41136583337917604	4				NaN	NaN	0	NaN	2009	2398	4405
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4410	15.837	NaN	857.2	30	0	114.05	0.106			+	-1	VVLMEPMIV	9	40	349.52575471169945	NaN	0	349.52581787109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_VVLM(Oxidation (M))EPMIV_	REV__ENSG00000279000|ENST00000641238|OR10A6;REV__OR10A6|p.N172Kfs*5|1|0.05|ENSG00000279000|chr11:7928147-7928148|-/TACTCTTGTC|frameshift_variant	29.14955571784316	0.3303970763161698	4				NaN	NaN	0	NaN	2010	2398	4405
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4411	15.839	NaN	3306.5	30	0	694.92	0.035	+			31376	QKFLEHTN	8	56	508.763272937615	NaN	0	508.8267822265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QKFLEHTN_	DOCK2|p.M1388Gfs*7|1|0.05|ENSG00000134516|chr5:170050344-170050345|-/AGGATGCTCATTAGAGATTT|frameshift_variant;DOCK2|p.N1321Kfs*10|1|0.37|ENSG00000134516|chr5:170045899-170045900|-/A|frameshift_variant;ENSG00000134516|ENST00000520908|DOCK2;ENST00000522994.1_1_5:169412837-169427133:+|nuORF;ENST00000523351.5_1_5:169188379-169509859:+|nuORF	74.25504064058377	1.7418937515398478	4				NaN	NaN	0	NaN	2011	2398	4405
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4428	15.874	NaN	23208	30	0	7054.8	0.214			+	40956	SVFYDVVK	8	57	478.75900593728414	955.5034589413683	2	478.7586975097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVFYDVVK_	REV__tr|U7STA9|U7STA9_FUSNUtRNA-specific2-thiouridylaseMnmAOS=FusobacteriumnucleatumCTI-5OX=1316586GN=mnmAPE=3SV=1	50.0245360154114	0.5941082100236891	4				NaN	NaN	0	NaN	2025	2401	4427
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4429	15.878	NaN	14596	30	0	3643.8	0.106			+	51029	YKPDESDAN	9	50	519.7225231430277	1037.4304933528554	2	519.72216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YKPDESDAN_	REV__ENSG00000161057|ENST00000292644|PSMC2;REV__ENST00000460021.1_1_7:102994369-103002536:+|nuORF;REV__PSMC2|p.A269Pfs*34|1|0.07|ENSG00000161057|chr7:103366117-103366117|A/-|frameshift_variant	31.529811441608018	0.5085848003137583	4				NaN	NaN	0	NaN	2026	2401	4427
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4430	15.88	NaN	7474.4	30	0	1045.2	0.106			+	32225	QTDFHTEK	8	72	503.2355038894249	1004.4564548456498	2	503.23529052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QTDFHTEK_	REV__DHX36|p.M705Nfs*20|1|0.33|ENSG00000174953|chr3:154284905-154284906|-/T|frameshift_variant;REV__DHX36|p.R854Efs*4|3|0.36|ENSG00000174953|chr3:154280586-154280586|T/-|frameshift_variant;REV__ENSG00000174953|ENST00000496811|DHX36;REV__nc|ENSG00000174953|Q9H2U1-2|DHX36;REV__nc|ENSG00000174953|Q9H2U1-3|DHX36	60.11826168202944	0.5006107059937851	4				NaN	NaN	0	NaN	2027	2401	4427
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4431	15.882	NaN	7572.7	30	0	1422.4	0.106				-1	 	0	53	491.2360916578452	490.2288151912452	1	491.23797607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2028	2401	4427
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4432	15.884	NaN	1429.2	30	0	213.9	0.106			+	-1	MGSVIGFD	8	32	421.19293212890625	NaN	0	421.19293212890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_M(Oxidation (M))GSVIGFD_	REV__ENSG00000163479|ENST00000295702|SSR2;REV__ENST00000368311.5_1_1:155984733-155990735:-|nuORF;REV__ENST00000472898.5_1_1:155981561-155990687:-|nuORF;REV__ENST00000484320.6_1_1:155988041-155990687:-|nuORF;REV__ENST00000532074.5_1_1:155984857-155990687:-|nuORF	14.664097394203935	1.7418937515398478	4				NaN	NaN	0	NaN	2029	2401	4427
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4433	15.885	NaN	2550.2	30	0	383.4	0.035				-1	VAVRPECR	8	62	329.51127100074797	985.5119836024439	3	329.5114440917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_VAVRPEC(Carbamidomethyl (C))R_	ENST00000591380.1_1_19:37960280-37960391:+|nuORF	30.503639358989545	0.7238069182250283	4				NaN	NaN	0	NaN	2030	2401	4427
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4451	15.924	NaN	3683	30	0	913.6	0.214	+			4009	ATCGMGMKK	9	65	492.22699317307655	NaN	0	492.2270812988281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_ATC(Carbamidomethyl (C))GMGMKK_	ENSG00000262655|ENST00000576479|SPON1	64.20726635412375	0.13137488984569443	4				NaN	NaN	0	NaN	2045	2404	4450
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4452	15.927	NaN	5379.8	30	0	3170.6	0.106				-1	 	0	42	413.22662552958815	824.4386981259763	2	413.226806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2046	2404	4450
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4453	15.93	NaN	24162	30	0	2767.8	0.106	+			40708	SVCEGKGLHR	10	81	571.7906307931124	1141.5667086530248	2	571.7906494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SVC(Carbamidomethyl (C))EGKGLHR_	ENSG00000161011|ENST00000389805|SQSTM1;ENST00000466342.1_1_5:179250916-179260288:+|nuORF;nc|ENSG00000161011|Q13501-2|SQSTM1	96.66504779109242	0.09291513985748291	4				NaN	NaN	0	NaN	2047	2404	4450
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4454	15.932	NaN	8096.6	30	0	1993.2	0.106			+	46936	VIYLRDNE	8	58	511.2713247995959	NaN	0	511.271240234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VIYLRDNE_	REV__ENSG00000163491|ENST00000691995|NEK10;REV__ENST00000574215.5_1_3:27203940-27332977:-|nuORF;REV__nc|ENSG00000163491|Q6ZWH5-2|NEK10;REV__nc|ENSG00000163491|Q6ZWH5-4|NEK10;REV__nc|ENSG00000163491|Q6ZWH5|NEK10	28.2542754592877	1.7418937515398478	4				NaN	NaN	0	NaN	2048	2404	4450
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4455	15.933	NaN	35860	30	0	13567	0.106				-1	 	0	84	324.8658616090357	971.5757554273071	3	324.8660583496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2049	2404	4450
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4456	15.935	NaN	15870	30	0	2279.5	0.038	+			639	ADYSVFQVEIS	11	72	629.3017848356316	1256.589016738063	2	629.3018188476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ADYSVFQVEIS_	DNAH7|p.I2732Lfs*15|1|0.34|ENSG00000118997|chr2:195857597-195857597|T/-|frameshift_variant;DNAH7|p.S3691Afs*11|1|0.37|ENSG00000118997|chr2:195775977-195775977|T/-|frameshift_variant;DNAH7|p.T2935Ifs*12|1|0.24|ENSG00000118997|chr2:195845142-195845143|AG/-|frameshift_variant;ENSG00000118997|ENST00000312428|DNAH7	55.721020083383095	0.36165090524447163	4				NaN	NaN	0	NaN	2050	2404	4450
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4475	15.972	NaN	9712.9	30	0	3966.1	0.214			+	26183	LSRMNVCLG	9	43	496.75378202906063	991.4930111249213	2	496.75335693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSRMNVCLG_	REV__ENSG00000138892|ENST00000433387|TTLL8;REV__nc|ENSG00000138892|A6PVC2-2|TTLL8;REV__nc|ENSG00000138892|A6PVC2|TTLL8	21.9598887501803	0.5980208138527809	4				NaN	NaN	0	NaN	2066	2407	4474
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4476	15.976	NaN	7223.1	30	0	2389.9	0.106				-1	CWAPWVQT	8	59	516.7319692145641	NaN	0	516.73193359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))CWAPWVQT_	DNHD1|p.H123R|1|0.42|ENSG00000179532|chr11:6498583-6498583|A/G|missense_variant;DNHD1|p.Q530Tfs*14|1|0.11|ENSG00000179532|chr11:6519794-6519795|-/ACTCGCTC|frameshift_variant;DNHD1|p.R1358Afs*11|1|0.16|ENSG00000179532|chr11:6545007-6545007|C/-|frameshift_variant;DNHD1|p.S3597Rfs*6|1|0.1|ENSG00000179532|chr11:6565718-6565719|-/AG|frameshift_variant;DNHD1|p.T4259Pfs*33|2|0.33|ENSG00000179532|chr11:6568772-6568772|C/-|frameshift_variant;ENSG00000179532|ENST00000254579|DNHD1;nc|ENSG00000179532|Q96M86-4|DNHD1	31.954861631926434	1.7418937515398478	4				NaN	NaN	0	NaN	2067	2407	4474
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4477	15.978	NaN	3522.7	30	0	560.81	0.106			+	1697	AGTTPAPAL	9	66	399.72128358670693	NaN	0	399.7212219238281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AGTTPAPAL_	REV__ENST00000348159.8_1_1:156453152-156470609:-|nuORF;REV__ENST00000489057.1_1_1:156469342-156470480:-|nuORF	71.37791200682192	0.10092813839350395	4				NaN	NaN	0	NaN	2068	2407	4474
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4478	15.98	NaN	4059	30	0	876.85	0.106			+	1608	AGLTTLAR	8	48	401.74262883652403	801.4707047398481	2	401.7427978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AGLTTLAR_	REV__ENSG00000167261|ENST00000393847|DPEP2;REV__ENST00000268795.5_1_16:68025981-68027124:-|nuORF;REV__nc|ENSG00000167261|Q9H4A9-3|DPEP2	65.80317337860623	0.44433089765398776	4				NaN	NaN	0	NaN	2069	2407	4474
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4479	15.981	NaN	7930.7	30	0	1406.3	0.106			+	-1	EDGLMCDGLD	10	46	562.7177779631462	1123.4210029930923	2	562.7174682617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_EDGLMC(Carbamidomethyl (C))DGLD_	REV__ENSG00000204052|ENST00000372441|LRRC73	21.9598887501803	0.7004979571547932	4				NaN	NaN	0	NaN	2070	2407	4474
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4480	15.983	NaN	2328.7	30	0	350.56	0.034	+			3485	ASSGLMTKK	9	54	461.75482177734375	NaN	0	461.75482177734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASSGLMTKK_	ENSG00000128052|ENST00000263923|KDR;KDR|p.L371Pfs*2|1|0.41|ENSG00000128052|chr4:55110546-55110547|-/G|frameshift_variant;KDR|p.T1238Hfs*7|1|0.51|ENSG00000128052|chr4:55082586-55082586|T/-|frameshift_variant;nc|ENSG00000128052|P35968-2|KDR;nc|ENSG00000128052|P35968-3|KDR	47.95952297671804	0.22075498469600283	4				NaN	NaN	0	NaN	2071	2407	4474
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4481	15.984	NaN	5192.7	30	0	1621	0.14			+	40341	STTHAKTFE	9	51	511.2512533463567	1020.4879537595134	2	511.2299499511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STTHAKTFE_	REV__ENSG00000176387|ENST00000326152|HSD11B2	35.15202426646627	0.4747332964206883	4				NaN	NaN	0	NaN	2072	2407	4474
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4499	16.023	NaN	4778.9	30	0	1192.8	0.214			+	34126	RSSTRPHR	8	58	498.77491790741095	NaN	0	498.7745361328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RSSTRPHR_	REV__ENST00000310758.8_1_7:37382260-37488293:-|nuORF;REV__ENST00000448602.5_1_7:37382260-37488487:-|nuORF	51.33545320467046	1.7418937515398478	4				NaN	NaN	0	NaN	2087	2410	4498
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4500	16.027	NaN	5917.4	30	0	1690	0.106	+			22730	KVAVSDMKK	9	56	503.2918433542556	1004.5691337753112	2	503.2915954589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVAVSDMKK_	ACO1|p.P659Lfs*4|1|0.24|ENSG00000122729|chr9:32434574-32434574|C/-|frameshift_variant;ENSG00000122729|ENST00000309951|ACO1	54.776311868738084	0.25715957988447635	4				NaN	NaN	0	NaN	2088	2410	4498
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4501	16.029	NaN	7794.5	30	0	1788.4	0.106	+			39613	STHQAAIVSK	10	77	347.860966026236	1040.561068678908	3	347.8611145019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STHQAAIVSK_	ENSG00000122786|ENST00000361675|CALD1;ENST00000482470.5_1_7:134552484-134644871:+|nuORF;nc|ENSG00000122786|Q05682-2|CALD1;nc|ENSG00000122786|Q05682-3|CALD1;nc|ENSG00000122786|Q05682-4|CALD1;nc|ENSG00000122786|Q05682-5|CALD1;nc|ENSG00000122786|Q05682-6|CALD1	61.691277971877994	0.35045824941635534	4				NaN	NaN	0	NaN	2089	2410	4498
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4502	16.03	NaN	8370.2	30	0	1616.4	0.106	+			46093	VDAPSCNAIHC	11	69	565.2403530147208	1128.4661530962414	2	565.314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VDAPSCNAIHC_	ENSG00000165124|ENST00000374469|SVEP1;nc|ENSG00000165124|Q4LDE5-3|SVEP1;SVEP1|p.Y3375Mfs*48|1|0.3|ENSG00000165124|chr9:110386012-110386012|A/-|frameshift_variant	47.657333605630114	0.4531673460382624	4				NaN	NaN	0	NaN	2090	2410	4498
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4503	16.032	NaN	2752.3	30	0	466.53	0.106			+	-1	SALTRPAES	9	58	487.24876746009966	NaN	0	487.7300720214844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SALTRPAES_	REV__ENSG00000104435|ENST00000220876|STMN2;REV__nc|ENSG00000104435|Q93045-2|STMN2;REV__STMN2|p.P63H|1|0.32|ENSG00000104435|chr8:79641450-79641450|C/A|missense_variant	51.33545320467046	0.19748963086191895	4				NaN	NaN	0	NaN	2091	2410	4498
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4504	16.034	NaN	2803.5	30	0	882.89	0.034			+	32176	QSSGASCEH	9	31	453.1755968208396	904.3366407084792	2	453.17523193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QSSGASCEH_	REV__ENSG00000161640|ENST00000447370|SIGLEC11;REV__nc|ENSG00000161640|Q96RL6-2|SIGLEC11	14.864876125193954	0.6112419832031293	4				NaN	NaN	0	NaN	2092	2410	4498
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4505	16.035	NaN	9232.4	30	0	2212	0.143			+	-1	SIFVDKVLRM	10	56	612.34619140625	NaN	0	612.34619140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_SIFVDKVLRM(Oxidation (M))_	REV__ENSG00000008018|ENST00000262193|PSMB1	26.69291269510374	0.4125295221340092	4				NaN	NaN	0	NaN	2093	2410	4498
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4523	16.074	NaN	36693	30	0	5031.5	0.197	+			41811	SVSSDRIQK	9	82	510.2778522465959	1018.5411515599918	2	510.2777099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSSDRIQK_	ENSG00000146278|ENST00000336032|PNRC1;nc|ENSG00000146278|Q12796-2|PNRC1;PNRC1|p.K251Sfs*14|2|0.25|ENSG00000146278|chr6:89083958-89083958|A/-|frameshift_variant	134.7655990226056	0.012935733000282069	4				NaN	NaN	0	NaN	2108	2413	4522
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4524	16.077	NaN	10200	30	0	3130.2	0.106			+	-1	THCAWLKQ	8	66	522.2570873793389	1042.4996218254778	2	522.257080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_THC(Carbamidomethyl (C))AWLKQ_	REV__NCAPD2|p.R1290W|1|0.27|ENSG00000010292|chr12:6530721-6530721|C/T|missense_variant	57.81127852772723	0.5234495074909924	4				NaN	NaN	0	NaN	2109	2413	4522
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4525	16.079	NaN	3724.9	30	0	506.62	0.106			+	23565	LALGPGEGR	9	53	435.2455520361614	NaN	0	435.2455139160156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LALGPGEGR_	REV__ENST00000356731.9_1_5:179050060-179050201:-|nuORF;REV__ENST00000505811.5_1_5:179050060-179051151:-|nuORF	51.33545320467046	0.19748963086191895	4				NaN	NaN	0	NaN	2110	2413	4522
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4526	16.081	NaN	8876.5	30	0	2619.9	0.106	+			41922	SVVKITSKK	9	64	495.3216636118131	988.6287742904262	2	495.3214111328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVVKITSKK_	ENSG00000036054|ENST00000394144|TBC1D23;ENST00000471273.1_1_3:100034907-100042509:+|nuORF;ENST00000486274.5_1_3:99980342-100042509:+|nuORF;nc|ENSG00000036054|Q9NUY8-2|TBC1D23	115.23196543181992	0.024086211614104236	4				NaN	NaN	0	NaN	2111	2413	4522
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4527	16.083	NaN	4481.8	30	0	1966.2	0.106			+	41161	SVKISNKFL	9	56	345.8779362957394	1034.6119794874182	3	345.8780822753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVKISNKFL_	REV__ENSG00000038382|ENST00000344204|TRIO;REV__ENST00000515144.5_1_5:14293150-14488426:+|nuORF;REV__nc|ENSG00000038382|O75962-2|TRIO;REV__nc|ENSG00000038382|O75962-4|TRIO;REV__nc|ENSG00000038382|O75962-5|TRIO;REV__TRIO|p.V2351Cfs*62|3|0.3|ENSG00000038382|chr5:14487672-14487672|C/-|frameshift_variant	24.20275056022122	0.577060078256802	4				NaN	NaN	0	NaN	2112	2413	4522
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4528	16.085	NaN	4989.1	30	0	1171.2	0.106			+	37546	SLLVPHQLR	9	63	531.8244657800071	1061.6343786268142	2	533.2468872070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLLVPHQLR_	REV__ENSG00000179241|ENST00000315571|LDLRAD3;REV__LDLRAD3|p.R219C|1|0.2|ENSG00000179241|chr11:36227285-36227285|C/T|missense_variant;REV__LDLRAD3|p.Y293Tfs*20|2|0.4|ENSG00000179241|chr11:36229230-36229230|C/-|frameshift_variant;REV__nc|ENSG00000179241|Q86YD5-2|LDLRAD3	29.14955571784316	0.5308295550522326	4				NaN	NaN	0	NaN	2113	2413	4522
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4529	16.087	NaN	4752.1	30	0	1247.5	0.037			+	30675	QCAQHLGQIQ	10	49	563.27898159854	1124.5434102638799	2	563.22021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QCAQHLGQIQ_	REV__ENSG00000172878|ENST00000315796|METAP1D;REV__ENST00000488581.5_1_2:172926344-172931024:+|nuORF;REV__ENST00000493035.5_1_2:172864861-172928621:+|nuORF	34.172542307311794	0.6007644933930345	4				NaN	NaN	0	NaN	2114	2413	4522
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4546	16.122	NaN	21214	30	0	3357.3	0.215	+			18520	ISKSCRLKK	9	70	531.8244657800071	1061.6343786268142	2	531.8247680664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ISKSCRLKK_	ENST00000476275.5_1_1:78046613-78098535:-|nuORF;nc|ENSG00000036549|Q8IYH5-4|ZZZ3	93.5975768576971	0.05472259948179787	4				NaN	NaN	0	NaN	2128	2416	4545
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4547	16.125	NaN	7598.5	30	0	1588.5	0.106	+			6558	AYKKTHETL	9	74	545.7981995240634	1089.5818461149267	2	545.7984008789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AYKKTHETL_	ENSG00000111907|ENST00000534000|TPD52L1;ENST00000392483.6_1_6:125475019-125569560:+|nuORF;ENST00000532978.5_1_6:125475518-125573183:+|nuORF;nc|ENSG00000111907|Q16890-2|TPD52L1;nc|ENSG00000111907|Q16890-3|TPD52L1;nc|ENSG00000111907|Q16890-4|TPD52L1;nc|ENSG00000111907|Q16890-5|TPD52L1	69.6276240434122	0.14239879520340665	4				NaN	NaN	0	NaN	2129	2416	4545
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4548	16.127	NaN	4090.3	30	0	580.81	0.106			+	30644	QATAVKAILS	10	60	501.3030144998622	1000.5914760665244	2	501.3029479980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QATAVKAILS_	REV__CCT6A|p.I274*|1|0.21|ENSG00000146731|chr7:56058450-56058450|A/-|frameshift_variant;REV__CCT6A|p.Y250Tfs*11|2|0.27|ENSG00000146731|chr7:56058378-56058378|T/-|frameshift_variant;REV__CCT6B|p.I274*|1|0.1|ENSG00000132141|chr17:34942549-34942549|T/-|frameshift_variant;REV__ENSG00000132141|ENST00000314144|CCT6B;REV__ENSG00000146731|ENST00000275603|CCT6A;REV__ENST00000419314.5_1_7:64498910-64527388:+|nuORF;REV__nc|ENSG00000132141|Q92526-3|CCT6B	51.19269402634007	0.44601001148513897	4				NaN	NaN	0	NaN	2130	2416	4545
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4549	16.129	NaN	4375.8	30	0	723.43	0.106			+	13386	GLDEGKLEI	9	58	325.17831014746366	972.513101042591	3	325.17852783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GLDEGKLEI_	REV__tr|U7STD3|U7STD3_FUSNUElongationfactorPOS=FusobacteriumnucleatumCTI-5OX=1316586GN=efpPE=3SV=1	45.97224482568171	0.3502073465782774	4				NaN	NaN	0	NaN	2131	2416	4545
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4550	16.131	NaN	19870	30	0	7850.8	0.106	+			14474	GTCGKAFSR	9	81	492.2403298004995	982.4661066677991	2	492.2397155761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_GTC(Carbamidomethyl (C))GKAFSR_	ENSG00000124216|ENST00000244050|SNAI1	114.85826248499774	0.024312442104607014	4				NaN	NaN	0	NaN	2132	2416	4545
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4551	16.133	NaN	7394.1	30	0	1453.1	0.038	+			40128	STQAEGTRTLK	11	61	596.3203125	NaN	0	596.3203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STQAEGTRTLK_	ENSG00000095319|ENST00000372577|NUP188;nc|ENSG00000095319|Q5SRE5-2|NUP188	31.068146907933308	0.4269584437765198	4				NaN	NaN	0	NaN	2133	2416	4545
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4552	16.133	NaN	2803.4	30	0	462.56	0.141	+			14885	GTLQSQEAK	9	53	481.2509249848456	NaN	0	481.2508850097656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GTLQSQEAK_	ENSG00000099290|ENST00000282633|WASHC2A;ENSG00000172661|ENST00000623400|WASHC2C;nc|ENSG00000099290|Q641Q2-2|WASHC2A;nc|ENSG00000172661|Q9Y4E1-1|WASHC2C;nc|ENSG00000172661|Q9Y4E1-2|WASHC2C;nc|ENSG00000172661|Q9Y4E1-3|WASHC2C;nc|ENSG00000172661|Q9Y4E1-4|WASHC2C;nc|ENSG00000172661|Q9Y4E1-5|WASHC2C;nc|ENSG00000172661|Q9Y4E1-6|WASHC2C	58.22992032128504	0.15686832049467786	4				NaN	NaN	0	NaN	2134	2416	4545
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4570	16.173	NaN	12430	30	0	1276.6	0.212	+			22931	KVQDVKKTIQK	11	79	657.9096484337343	1313.8047439342686	2	657.9089965820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVQDVKKTIQK_	ENSG00000133706|ENST00000394434|LARS1;ENST00000508667.5_1_5:145522961-145531505:-|nuORF;nc|ENSG00000133706|Q9P2J5-2|LARS1	166.86328052991698	3.655267060997126E-05	4				NaN	NaN	0	NaN	2149	2419	4569
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4571	16.176	NaN	7617.9	30	0	877.86	0.106				-1	 	0	66	497.27362384761193	496.26634738101194	1	497.27349853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2150	2419	4569
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4572	16.178	NaN	4888.8	30	0	738.39	0.106	+			30893	QEKLEVTR	8	65	501.78245691709594	1001.5503609009919	2	501.7821960449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QEKLEVTR_	CLIP1|p.E992Lfs*32|1|0.2|ENSG00000130779|chr12:122328315-122328321|TGCTTCT/-|frameshift_variant;CLIP1|p.M1151Wfs*8|1|0.31|ENSG00000130779|chr12:122316771-122316771|T/-|frameshift_variant;ENSG00000130779|ENST00000620786|CLIP1;nc|ENSG00000130779|P30622-1|CLIP1;nc|ENSG00000130779|P30622-2|CLIP1	67.49366992349736	0.4277823096851425	4				NaN	NaN	0	NaN	2151	2419	4569
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4573	16.18	NaN	20257	30	0	3207.4	0.106	+			4342	ATGNWGDQKK	10	83	552.7755817540162	1103.5366105748324	2	552.7755126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATGNWGDQKK_	ENSG00000047315|ENST00000314595|POLR2B;POLR2B|p.N1030Sfs*23|1|0.07|ENSG00000047315|chr4:57025384-57025385|-/CT|frameshift_variant	150.15188659993407	0.008468567113416427	4				NaN	NaN	0	NaN	2152	2419	4569
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4574	16.182	NaN	5568.9	30	0	1455.2	0.106			+	24599	LGQKPWLDQ	9	46	362.19753792668416	1083.5707843802525	3	362.19757080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LGQKPWLDQ_	REV__ENSG00000198039|ENST00000476120|ZNF273;REV__nc|ENSG00000198039|Q14593-2|ZNF273	29.14955571784316	0.5308295550522326	4				NaN	NaN	0	NaN	2153	2419	4569
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4575	16.184	NaN	15302	30	0	1699	0.035	+			39322	STAVATDVKK	10	78	510.29056056209413	1018.5665681909883	2	510.29010009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STAVATDVKK_	ENSG00000128298|ENST00000381669|BAIAP2L2;nc|ENSG00000128298|Q6UXY1-2|BAIAP2L2	195.57289506066198	6.77468932343411E-06	4				NaN	NaN	0	NaN	2154	2419	4569
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4576	16.184	NaN	5253.4	30	0	607.53	0.139	+			4049	ATDGMAVRK	9	59	474.75071755434385	947.4868821754877	2	474.75006103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATDGMAVRK_	ENSG00000136715|ENST00000643581|SAP130;nc|ENSG00000136715|Q9H0E3-2|SAP130;nc|ENSG00000136715|Q9H0E3-3|SAP130;SAP130|p.R833Kfs*17|1|0.38|ENSG00000136715|chr2:127950308-127950309|-/G|frameshift_variant	52.936696900407355	0.27249468807391813	4				NaN	NaN	0	NaN	2155	2419	4569
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4594	16.223	NaN	7630.4	30	0	1566.4	0.214	+			36296	SERGRGRAGSR	11	55	594.8206176757812	NaN	0	594.8206176757812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SERGRGRAGSR_	KCNH2|p.A1144Pfs*111|1|0.36|ENSG00000055118|chr7:150945415-150945415|C/-|frameshift_variant	22.579656572578934	0.456735970842152	4				NaN	NaN	0	NaN	2170	2422	4593
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4595	16.227	NaN	1947.9	30	0	134.02	0.106				-1	 	0	68	321.673095703125	NaN	0	321.673095703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2171	2422	4593
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4596	16.229	NaN	5966.6	30	0	1127.4	0.106			+	33896	RRRGRSLLA	9	48	542.8457641601562	NaN	0	542.8457641601562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RRRGRSLLA_	REV__ENSG00000171004|ENST00000370833|HS6ST2;REV__HS6ST2|p.L496Cfs*7|1|0.51|ENSG00000171004|chrX:132628554-132628554|A/-|frameshift_variant;REV__nc|ENSG00000171004|Q96MM7|HS6ST2	25.125986553469783	0.3507112406247533	4				NaN	NaN	0	NaN	2172	2422	4593
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4597	16.231	NaN	7933.1	30	0	1716.1	0.106	+			10160	ESTYYMEGN	9	67	547.2106248675196	NaN	0	547.2107543945312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ESTYYMEGN_	ENSG00000100024|ENST00000326010|UPB1	32.81241826257853	0.3119040447479903	4				NaN	NaN	0	NaN	2173	2422	4593
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4598	16.232	NaN	6473.4	30	0	1073.5	0.106			+	8298	EAIRANFLL	9	57	523.8022303234115	NaN	0	523.8017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EAIRANFLL_	REV__ENSG00000164190|ENST00000282516|NIPBL;REV__nc|ENSG00000164190|Q6KC79-2|NIPBL;REV__nc|ENSG00000164190|Q6KC79-3|NIPBL;REV__NIPBL|p.F1423Lfs*15|1|0.43|ENSG00000164190|chr5:37008032-37008032|T/-|frameshift_variant;REV__NIPBL|p.I2776Lfs*3|1|0.17|ENSG00000164190|chr5:37064797-37064797|A/-|frameshift_variant;REV__NIPBL|p.K603Sfs*11|2|0.29|ENSG00000164190|chr5:36984981-36984981|A/-|frameshift_variant;REV__NIPBL|p.L2220Ffs*3|1|0.21|ENSG00000164190|chr5:37048567-37048568|-/T|frameshift_variant;REV__NIPBL|p.R505Efs*35|1|0.19|ENSG00000164190|chr5:36984687-36984687|A/-|frameshift_variant	52.936696900407355	0.1864545979552969	4				NaN	NaN	0	NaN	2174	2422	4593
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4599	16.234	NaN	6977.1	30	0	1521.2	0.037			+	34066	RSNVRLAKAL	10	51	564.3524496967165	NaN	0	564.7550048828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RSNVRLAKAL_	REV__ENSG00000159753|ENST00000334583|CARMIL2;REV__ENST00000602321.5_1_16:67683361-67683586:+|nuORF;REV__nc|ENSG00000159753|Q6F5E8-2|CARMIL2	18.262085536374414	0.4201028297492154	4				NaN	NaN	0	NaN	2175	2422	4593
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4600	16.235	NaN	2249.7	30	0	209.71	0.144	+			22325	KTFSLVTMI	9	42	347.2008043049843	NaN	0	347.2010803222656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KTFSLVTMI_	MSH2|p.V102Ifs*75|1|0.05|ENSG00000095002|chr2:47408491-47408492|-/GATATTAC|frameshift_variant	42.86426827375447	0.2558691296974908	4				NaN	NaN	0	NaN	2176	2422	4593
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4618	16.274	NaN	9349.3	30	0	2599	0.214			+	24954	LLAKVKATK	9	69	324.5585798259729	NaN	0	324.5585632324219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LLAKVKATK_	REV__ENSG00000184313|ENST00000421030|MROH7;REV__MROH7|p.R1167Efs*23|1|0.13|ENSG00000184313|chr1:54702676-54702676|A/-|frameshift_variant;REV__nc|ENSG00000184313|Q68CQ1-1|MROH7;REV__nc|ENSG00000184313|Q68CQ1-9|MROH7	35.61828744233558	0.29773779453147337	4				NaN	NaN	0	NaN	2191	2425	4617
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4619	16.277	NaN	19080	30	0	3324.6	0.106	+			48874	VVDAKTLKK	9	70	501.3215326115344	1000.6285122898688	2	501.3211975097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVDAKTLKK_	ENSG00000079246|ENST00000392132|XRCC5;ENST00000493706.1_1_2:216990646-216992426:+|nuORF;XRCC5|p.E287Kfs*11|2|0.25|ENSG00000079246|chr2:216127589-216127589|A/-|frameshift_variant;XRCC5|p.Q488Rfs*29|1|0.06|ENSG00000079246|chr2:216141305-216141305|C/-|frameshift_variant	120.8684288430529	0.02067403653475984	4				NaN	NaN	0	NaN	2192	2425	4617
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4620	16.279	NaN	8745.9	30	0	1560.6	0.106			+	-1	GCNEHTCH	8	47	479.16955373680184	956.3245545404037	2	479.1693115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_GC(Carbamidomethyl (C))NEHTCH_	REV__CASZ1|p.R1461H|1|0.32|ENSG00000130940|chr1:10639840-10639840|C/T|missense_variant	15.641811463095205	0.7929430624199021	4				NaN	NaN	0	NaN	2193	2425	4617
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4621	16.281	NaN	6282.3	30	0	1491.1	0.106	+			13602	GLVSVCCCT	9	52	442.6881104408797	883.3616679485594	2	442.68853759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GLVSVCCCT_	ENST00000592970.1_3_17:40086676-40086784:-|nuORF	33.51558372728122	0.4900267029546261	4				NaN	NaN	0	NaN	2194	2425	4617
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4622	16.283	NaN	6050.9	30	0	1257.2	0.106			+	-1	LSCYGCCC	8	51	483.1518861628819	964.2892193925638	2	483.1520080566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C)	_LSC(Carbamidomethyl (C))YGCCC(Carbamidomethyl (C))_	REV__L1PA6_dup546|chr2:49227587-49231532:-|4.547726375381561|0.2927699401366612|3.96|483.0|130|1|anti-sense	29.841539824830324	0.7289191502596711	4				NaN	NaN	0	NaN	2195	2425	4617
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4623	16.285	NaN	5340.2	30	0	715.81	0.035	+			14548	GTEVQLTEL	9	68	495.26201716770873	NaN	0	494.7928161621094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTEVQLTEL_	CON__P35900;ENSG00000171431|ENST00000167588|KRT20	45.97224482568171	0.23445038899310136	4				NaN	NaN	0	NaN	2196	2425	4617
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4624	16.285	NaN	10336	30	0	1689.8	0.143			+	-1	RCHCTLSSTQ	10	63	596.7622354829565	NaN	0	596.7623291015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_RCHC(Carbamidomethyl (C))TLSSTQ_	REV__ENST00000396408.7_1_19:53912606-53912957:+|nuORF	41.42661286455405	0.3598046802465243	4				NaN	NaN	0	NaN	2197	2425	4617
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4642	16.324	NaN	29541	30	0	6780.1	0.214	+			14163	GSNGTIIRK	9	92	473.2775500259074	944.5405471186148	2	473.27716064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSNGTIIRK_	ENSG00000117983|ENST00000529681|MUC5B;MUC5B|p.A1645Gfs*130|1|0.48|ENSG00000117983|chr11:1241806-1241807|-/C|frameshift_variant;MUC5B|p.E2447Vfs*233|1|0.15|ENSG00000117983|chr11:1244218-1244219|TG/-|frameshift_variant;MUC5B|p.E2929Gfs*98|1|0.13|ENSG00000117983|chr11:1245660-1245661|-/GC|frameshift_variant;MUC5B|p.P2717Qfs*3|2|0.21|ENSG00000117983|chr11:1245025-1245025|C/-|frameshift_variant;MUC5B|p.P3417Qfs*3|1|0.41|ENSG00000117983|chr11:1247125-1247125|C/-|frameshift_variant;MUC5B|p.S2205Qfs*54|1|0.2|ENSG00000117983|chr11:1243486-1243487|-/C|frameshift_variant;MUC5B|p.S3126Pfs*13|1|0.37|ENSG00000117983|chr11:1246251-1246251|C/-|frameshift_variant;MUC5B|p.S3878Pfs*27|1|0.13|ENSG00000117983|chr11:1248507-1248507|C/-|frameshift_variant;MUC5B|p.S4017Lfs*56|1|0.22|ENSG00000117983|chr11:1248928-1248929|-/C|frameshift_variant;MUC5B|p.T4706Pfs*4|2|0.37|ENSG00000117983|chr11:1250996-1250996|A/-|frameshift_variant	117.81106730687013	0.02252488733980868	4				NaN	NaN	0	NaN	2212	2428	4641
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4643	16.327	NaN	9908.6	30	0	6153.5	0.106	+			22950	KVQSKVNLK	9	70	348.55702771056303	1042.649253731889	3	348.5572204589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVQSKVNLK_	DYNC1H1|p.F2635Lfs*67|1|0.16|ENSG00000197102|chr14:102017141-102017141|T/-|frameshift_variant;DYNC1H1|p.G1902Vfs*27|2|0.27|ENSG00000197102|chr14:102006154-102006154|G/-|frameshift_variant;DYNC1H1|p.K3112Hfs*3|1|0.31|ENSG00000197102|chr14:102027998-102027999|-/TCACAAG|frameshift_variant;DYNC1H1|p.W4201Gfs*43|1|0.42|ENSG00000197102|chr14:102043958-102043958|G/-|frameshift_variant;ENSG00000197102|ENST00000360184|DYNC1H1	47.657333605630114	0.33044192980041115	4				NaN	NaN	0	NaN	2213	2428	4641
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4644	16.33	NaN	5517.2	30	0	616.09	0.106	+			13754	GQDPDSPQH	9	59	490.7071561134224	979.3997592936448	2	490.706787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GQDPDSPQH_	ENSG00000178719|ENST00000395068|GRINA	44.377184641726394	0.36891676396732553	4				NaN	NaN	0	NaN	2214	2428	4641
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4645	16.331	NaN	36354	30	0	13263	0.106	+			32298	QTPAESDFQV	10	79	561.2568969726562	NaN	0	561.2568969726562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QTPAESDFQV_	ENSG00000006607|ENST00000264042|FARP2;nc|ENSG00000006607|O94887-2|FARP2;nc|ENSG00000006607|O94887-3|FARP2	54.722347961057174	0.27574710963839943	4				NaN	NaN	0	NaN	2215	2428	4641
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4646	16.333	NaN	15351	30	0	1898	0.106	+			34561	RVLESVQKK	9	77	543.8352128937049	1085.6558728542097	2	543.8353271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RVLESVQKK_	ENSG00000127511|ENST00000248054|SIN3B;nc|ENSG00000127511|O75182|SIN3B;SIN3B|p.F776Lfs*21|1|0.31|ENSG00000127511|chr19:16869880-16869880|T/-|frameshift_variant;SIN3B|p.P742Qfs*55|1|0.37|ENSG00000127511|chr19:16869777-16869777|C/-|frameshift_variant	129.42129120953632	0.01549634589885217	4				NaN	NaN	0	NaN	2216	2428	4641
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4647	16.335	NaN	16638	30	0	2508.8	0.037	+			39632	STIDPSGTRSK	11	78	574.7992366838313	1147.5839204344625	2	574.7990112304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STIDPSGTRSK_	ENSG00000121931|ENST00000369763|LRIF1	98.75417337143367	0.06326268080394254	4				NaN	NaN	0	NaN	2217	2428	4641
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4648	16.336	NaN	10392	30	0	1545.6	0.142			+	-1	LCPHCLNKAG	10	61	585.2833746847779	NaN	0	585.2923583984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C)	_LC(Carbamidomethyl (C))PHC(Carbamidomethyl (C))LNKAG_	REV__ENST00000441493.6_1_22:18271402-18271729:-|nuORF	29.14955571784316	0.4044631218331212	4				NaN	NaN	0	NaN	2218	2428	4641
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4667	16.374	NaN	54537	30	0	13256	0.177	+			6447	AVYENAREK	9	84	540.2776385085791	1078.5407240839581	2	540.2777709960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVYENAREK_	ENSG00000164941|ENST00000523731|INTS8;ENST00000523321.5_1_8:95835614-95871872:+|nuORF;INTS8|p.F279Lfs*6|1|0.34|ENSG00000164941|chr8:94836602-94836602|T/-|frameshift_variant;nc|ENSG00000164941|Q75QN2-2|INTS8	106.68306549817024	0.032382560583716295	4				NaN	NaN	0	NaN	2234	2431	4666
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4668	16.377	NaN	15942	30	0	4137.3	0.106	+			13394	GLEDCPGVKE	10	69	552.2573670900047	NaN	0	552.25732421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GLEDC(Carbamidomethyl (C))PGVKE_	ARMCX1|p.V187Gfs*18|1|0.36|ENSG00000126947|chrX:101553482-101553483|-/TGGCC|frameshift_variant;ENSG00000126947|ENST00000372829|ARMCX1	64.20726635412375	0.1999210135493042	4				NaN	NaN	0	NaN	2235	2431	4666
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4669	16.379	NaN	9861.1	30	0	1305.6	0.106				-1	ATCSRVLNK	9	75	524.7822273720138	NaN	0	524.7822265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_ATC(Carbamidomethyl (C))SRVLNK_	ENSG00000176853|ENST00000334705|FAM91A1	82.7504851949679	0.061958946529908215	4				NaN	NaN	0	NaN	2236	2431	4666
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4670	16.381	NaN	1735.8	30	0	195.45	0.106				-1	ACSMSCCVP	9	50	344.11960675218864	NaN	0	343.8815002441406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C),Oxidation (M)	_ACSM(Oxidation (M))SC(Carbamidomethyl (C))C(Carbamidomethyl (C))VP_	ENST00000592869.1_1_17:74152379-74154596:-|nuORF	15.641811463095205	0.38404136392510424	4				NaN	NaN	0	NaN	2237	2431	4666
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4671	16.382	NaN	15268	30	0	2455	0.106	+			6457	AVYGQKEIHRK	11	68	664.8761854119214	1327.7378178906426	2	664.8756713867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVYGQKEIHRK_	ENSG00000145907|ENST00000356245|G3BP1;ENST00000413279.1_1_2:136269117-136269381:-|nuORF;ENST00000519832.1_1_5:151166169-151170647:+|nuORF;nc|ENSG00000145907|Q13283-2|G3BP1	56.632244143249146	0.3535169766007185	4				NaN	NaN	0	NaN	2238	2431	4666
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4672	16.384	NaN	13479	30	0	2954.3	0.106	+			29488	PCSNCTVQYY	10	65	589.2379760742188	NaN	0	589.2379760742188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PCSNCTVQYY_	ENST00000303296.8_1_11:33378294-33378417:+|nuORF	16.71738777980365	0.4201028297492154	4				NaN	NaN	0	NaN	2239	2431	4666
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4673	16.386	NaN	10521	30	0	2357.3	0.038				-1	SSWCCRSGCAS	11	53	602.2195434570312	NaN	0	602.2195434570312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_SSWCC(Carbamidomethyl (C))RSGCAS_	ENST00000519685.5_1_8:22863615-22864656:+|nuORF	17.468008924990375	0.456735970842152	4				NaN	NaN	0	NaN	2240	2431	4666
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4691	16.424	NaN	54411	30	0	14121	0.214	+			15600	GVIKAVDKK	9	79	479.30904976311916	956.6035465930383	2	479.30889892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVIKAVDKK_	ENSG00000156508|ENST00000309268|EEF1A1;ENST00000417549.1_1_13:28789725-28790031:+|nuORF;ENST00000419025.1_1_3:183744159-183744318:-|nuORF;ENST00000436459.2_1_9:135895553-135896258:+|nuORF;ENST00000443590.1_1_2:107313789-107313948:-|nuORF;ENST00000513637.1_1_5:43495177-43495438:-|nuORF;ENST00000559385.1_1_15:53229359-53229566:-|nuORF;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	85.86182877749512	0.07653218437724067	4				NaN	NaN	0	NaN	2255	2434	4690
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4692	16.427	NaN	41631	30	0	8882.5	0.106	+			2946	ASDPNVSKKLK	11	86	593.843685226317	1185.672817519434	2	593.8438110351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASDPNVSKKLK_	ENSG00000151474|ENST00000357447|FRMD4A	152.67163325587376	6.606338268086461E-05	4				NaN	NaN	0	NaN	2256	2434	4690
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4693	16.429	NaN	20153	30	0	3221.7	0.106	+			6374	AVTYTEHAK	9	88	510.2620849800499	1018.5096170268998	2	510.2621154785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVTYTEHAK_	ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2	122.1759843771914	0.019882474861609503	4				NaN	NaN	0	NaN	2257	2434	4690
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4694	16.431	NaN	7072.6	30	0	1276.8	0.106			+	25623	LQPSRCPSPA	10	65	528.2690546888257	NaN	0	528.2689819335938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LQPSRCPSPA_	REV__ENST00000396868.7_1_16:3283812-3285267:-|nuORF;REV__ENST00000577015.1_1_16:3284985-3285267:-|nuORF	31.529811441608018	0.39664753963064203	4				NaN	NaN	0	NaN	2258	2434	4690
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4695	16.433	NaN	9467.1	30	0	2231	0.106			+	12166	GALFDNENNY	10	69	578.7480372576418	1155.4815215820836	2	579.2911987304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GALFDNENNY_	REV__ENSG00000254726|ENST00000532414|MEX3A;REV__MEX3A|p.P390Rfs*88|1|0.3|ENSG00000254726|chr1:156076968-156076968|G/-|frameshift_variant	26.69291269510374	0.6618461711292317	4				NaN	NaN	0	NaN	2259	2434	4690
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4696	16.435	NaN	8277.8	30	0	1220	0.035			+	-1	GCGSARGARP	10	54	494.7398106524607	987.4650683717214	2	494.7394714355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_GC(Carbamidomethyl (C))GSARGARP_	REV__ENST00000530802.1_1_11:67817853-67818283:+|nuORF	19.996771675451527	0.7148376616046445	4				NaN	NaN	0	NaN	2260	2434	4690
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4697	16.435	NaN	10368	30	0	2404.8	0.143			+	32038	QRRPREQGPS	10	60	605.8231439668971	1209.631735000594	2	605.8233032226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QRRPREQGPS_	REV__ENSG00000035141|ENST00000430566|FAM136A	29.170058357718403	0.6416167986984785	4				NaN	NaN	0	NaN	2261	2434	4690
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4715	16.474	NaN	38111	30	0	7745.4	0.214			+	48883	VVDCGYQCNA	10	90	564.7277598822687	1127.4409668313374	2	564.7281494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_VVDCGYQC(Carbamidomethyl (C))NA_	REV__ENSG00000168743|ENST00000379987|NPNT;REV__nc|ENSG00000168743|Q6UXI9-2|NPNT;REV__nc|ENSG00000168743|Q6UXI9-3|NPNT;REV__nc|ENSG00000168743|Q6UXI9-4|NPNT;REV__nc|ENSG00000168743|Q6UXI9-5|NPNT;REV__nc|ENSG00000168743|Q6UXI9-6|NPNT;REV__NPNT|p.R542Gfs*10|1|0.43|ENSG00000168743|chr4:105968911-105968911|A/-|frameshift_variant	51.19269402634007	0.44601001148513897	4				NaN	NaN	0	NaN	2276	2437	4714
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4716	16.477	NaN	17713	30	0	1928.6	0.106	+			48598	VTQSEIAQKQK	11	92	630.3516847304315	NaN	0	630.3516235351562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTQSEIAQKQK_	ENSG00000197702|ENST00000334956|PARVA;ENST00000533345.5_1_11:12419899-12534890:+|nuORF	183.72194652814687	1.462687394690633E-16	4				NaN	NaN	0	NaN	2277	2437	4714
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4717	16.479	NaN	7471.7	30	0	1321.7	0.106	+			49878	VYTKKTTKL	9	67	541.3348105815817	NaN	0	541.3347778320312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYTKKTTKL_	ENSG00000148396|ENST00000684901|SEC16A;nc|ENSG00000148396|O15027-2|SEC16A;nc|ENSG00000148396|O15027-3|SEC16A;nc|ENSG00000148396|O15027-4|SEC16A;nc|ENSG00000148396|O15027-5|SEC16A;SEC16A|p.P2155Hfs*25|1|0.25|ENSG00000148396|chr9:136447664-136447664|G/-|frameshift_variant	72.2432373244024	0.09796301979040985	4				NaN	NaN	0	NaN	2278	2437	4714
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4718	16.481	NaN	11937	30	0	2434	0.106				-1	SLVHCEDCSC	10	77	576.707199886957	1151.399846840714	2	576.7072143554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_SLVHCEDC(Carbamidomethyl (C))SC_	nc|ENSG00000127922|Q6ZVN7|SEM1	20.94693142431847	0.7087701759873708	4				NaN	NaN	0	NaN	2279	2437	4714
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4719	16.483	NaN	17329	30	0	1442.3	0.106			+	23184	KWPWFTSHIPC	11	88	701.3428282338826	1400.6711035345652	2	701.3419189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KWPWFTSHIPC_	REV__ENST00000587705.5_1_17:40937392-40940185:+|nuORF	51.19269402634007	0.4047928213175833	4				NaN	NaN	0	NaN	2280	2437	4714
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4720	16.485	NaN	3113	30	0	441.99	0.035			+	31845	QPSVTGSQQG	10	50	494.7398106524607	987.4650683717214	2	494.7391357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QPSVTGSQQG_	REV__ANKRD36C|p.F1404Lfs*4|1|0.33|ENSG00000174501|chr2:95856049-95856049|A/-|frameshift_variant;REV__ENSG00000135976|ENST00000420699|ANKRD36;REV__ENSG00000174501|ENST00000295246|ANKRD36C;REV__ENSG00000196912|ENST00000359901|ANKRD36B;REV__ENST00000534304.5_1_2:96525807-96601268:-|nuORF;REV__nc|ENSG00000174501|Q5JPF3-3|ANKRD36C;REV__nc|ENSG00000174501|Q5JPF3|ANKRD36C;REV__nc|ENSG00000196912|Q8N2N9-2|ANKRD36B;REV__nc|ENSG00000196912|Q8N2N9-3|ANKRD36B	20.94693142431847	0.7087701759873708	4				NaN	NaN	0	NaN	2281	2437	4714
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4721	16.485	NaN	4639.5	30	0	998.49	0.144	+			22664	KTYIPPKGETK	11	66	421.2427091936302	1260.7062981810907	3	421.2430114746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KTYIPPKGETK_	ENSG00000189403|ENST00000341423|HMGB1;ENST00000559968.1_1_14:68082236-68082464:+|nuORF;nc|ENSG00000124097|B2RPK0|HMGB1P1	34.08650109265054	0.6322515996262609	4				NaN	NaN	0	NaN	2282	2437	4714
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4739	16.526	NaN	13167	30	0	2456.1	0.214	+			37026	SIQRKLQEK	9	82	565.3381215415318	1128.6616901498635	2	565.3382568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIQRKLQEK_	ENSG00000138640|ENST00000264344|FAM13A;ENST00000508360.5_1_4:89653076-89671014:-|nuORF;ENST00000511573.5_1_4:89649686-89680064:-|nuORF;nc|ENSG00000138640|O94988-1|FAM13A;nc|ENSG00000138640|O94988-3|FAM13A;nc|ENSG00000138640|O94988-5|FAM13A;nc|ENSG00000138640|O94988-6|FAM13A	161.51181693189292	0.004215809300937111	4				NaN	NaN	0	NaN	2297	2440	4738
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4740	16.529	NaN	13142	30	0	2557.6	0.106	+			4148	ATEQPLTAKK	10	80	543.811560152921	1085.6085673726418	2	543.8115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATEQPLTAKK_	ENSG00000120725|ENST00000394817|SIL1	142.36107225718385	0.01012457621782354	4				NaN	NaN	0	NaN	2298	2440	4738
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4741	16.531	NaN	3098.3	30	0	459.56	0.106			+	21661	KPYLVKMK	8	57	511.8090515136719	NaN	0	511.8090515136719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_KPYLVKM(Oxidation (M))K_	REV__NUP35|p.D312Mfs*26|1|0.48|ENSG00000163002|chr2:183161077-183161077|A/-|frameshift_variant	57.81127852772723	1.7418937515398478	4				NaN	NaN	0	NaN	2299	2440	4738
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4742	16.533	NaN	5052.7	30	0	929.21	0.106	+			9949	ERARLEGELK	10	54	600.8381958007812	NaN	0	600.8381958007812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ERARLEGELK_	ENSG00000179562|ENST00000321407|GCC1;GCC1|p.T633Afs*8|1|0.05|ENSG00000179562|chr7:127582446-127582447|-/CA|frameshift_variant	41.42661286455405	0.3598046802465243	4				NaN	NaN	0	NaN	2300	2440	4738
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4743	16.535	NaN	5630.7	30	0	1037.6	0.106	+			5872	AVITNKDVRK	10	70	572.346435546875	NaN	0	572.346435546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVITNKDVRK_	ENSG00000104408|ENST00000220849|EIF3E	36.527901853580055	0.380236283444939	4				NaN	NaN	0	NaN	2301	2440	4738
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4744	16.537	NaN	4597.1	30	0	850.45	0.037			+	-1	CFRCCMPY	8	47	576.707199886957	1151.399846840714	2	577.3172607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Carbamidomethyl (C),Oxidation (M)	_C(Carbamidomethyl (C))FRCC(Carbamidomethyl (C))M(Oxidation (M))PY_	REV__ENST00000519716.6_1_19:17712688-17712913:-|nuORF	15.63621529709179	0.7929342111279789	4				NaN	NaN	0	NaN	2302	2440	4738
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4762	16.573	NaN	5712.4	30	0	1065.4	0.214	+			40722	SVCGKSFHR	9	66	539.266587158454	1076.5186213837078	2	539.2667846679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SVC(Carbamidomethyl (C))GKSFHR_	ENSG00000066422|ENST00000312938|ZBTB11;ZBTB11|p.E974Nfs*14|1|0.1|ENSG00000066422|chr3:101651408-101651408|C/-|frameshift_variant	68.84614121027924	0.14577793175421136	4				NaN	NaN	0	NaN	2317	2443	4761
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4763	16.576	NaN	4420.7	30	0	567.44	0.106	+			21730	KQLELEKQ	8	60	508.29276345110117	1014.5709739690024	2	508.29241943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KQLELEKQ_	ENSG00000101040|ENST00000471951|ZMYND8;nc|ENSG00000101040|Q9ULU4-10|ZMYND8;nc|ENSG00000101040|Q9ULU4-11|ZMYND8;nc|ENSG00000101040|Q9ULU4-12|ZMYND8;nc|ENSG00000101040|Q9ULU4-13|ZMYND8;nc|ENSG00000101040|Q9ULU4-14|ZMYND8;nc|ENSG00000101040|Q9ULU4-15|ZMYND8;nc|ENSG00000101040|Q9ULU4-16|ZMYND8;nc|ENSG00000101040|Q9ULU4-17|ZMYND8;nc|ENSG00000101040|Q9ULU4-18|ZMYND8;nc|ENSG00000101040|Q9ULU4-19|ZMYND8;nc|ENSG00000101040|Q9ULU4-2|ZMYND8;nc|ENSG00000101040|Q9ULU4-20|ZMYND8;nc|ENSG00000101040|Q9ULU4-21|ZMYND8;nc|ENSG00000101040|Q9ULU4-22|ZMYND8;nc|ENSG00000101040|Q9ULU4-23|ZMYND8;nc|ENSG00000101040|Q9ULU4-3|ZMYND8;nc|ENSG00000101040|Q9ULU4-4|ZMYND8;nc|ENSG00000101040|Q9ULU4-5|ZMYND8;nc|ENSG00000101040|Q9ULU4-6|ZMYND8;nc|ENSG00000101040|Q9ULU4-8|ZMYND8;nc|ENSG00000101040|Q9ULU4-9|ZMYND8;nc|ENSG00000101040|Q9ULU4|ZMYND8	79.71258880314673	0.32596852995588826	4				NaN	NaN	0	NaN	2318	2443	4761
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4764	16.579	NaN	2906.3	30	0	407.02	0.106				-1	CLMRPCANGA	10	56	526.2259850732798	1050.4374172133596	2	525.2725830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_CLM(Oxidation (M))RPCANGA_	ENSG00000171462|ENST00000372488|DLK2	23.04248740728303	0.69165701907106	4				NaN	NaN	0	NaN	2319	2443	4761
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4765	16.58	NaN	1733.8	30	0	300.48	0.106	+			45464	TYAGGTASATK	11	40	514.2565307617188	NaN	0	514.2565307617188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TYAGGTASATK_	CAST|p.E474Kfs*10|1|0.39|ENSG00000153113|chr5:96754695-96754695|A/-|frameshift_variant;ENSG00000153113|ENST00000675179|CAST;ENST00000507487.5_1_5:95998126-96062463:+|nuORF;ENST00000515160.5_1_5:95998126-96031662:+|nuORF;nc|ENSG00000153113|P20810-10|CAST;nc|ENSG00000153113|P20810-5|CAST;nc|ENSG00000153113|P20810-7|CAST;nc|ENSG00000153113|P20810-9|CAST	45.02220120713402	0.3510711409553835	4				NaN	NaN	0	NaN	2320	2443	4761
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4766	16.582	NaN	2019.6	30	0	484.08	0.106				-1	HFCPGCGWP	9	51	559.2193644585315	NaN	0	559.31494140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C)	_HFC(Carbamidomethyl (C))PGC(Carbamidomethyl (C))GWP_	ENST00000357736.8_1_17:79877633-79877984:-|nuORF	21.70233525837049	0.3635294413921169	4				NaN	NaN	0	NaN	2321	2443	4761
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4767	16.584	NaN	2134.5	30	0	434.57	0.034	+			48103	VSTPVTGHK	9	44	463.25918707373415	924.5038212142683	2	463.25897216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VSTPVTGHK_	ENSG00000145012|ENST00000617246|LPP;LPP|p.C364Lfs*29|1|0.29|ENSG00000145012|chr3:188609815-188609816|-/C|frameshift_variant	29.170058357718403	0.5306379469863586	4				NaN	NaN	0	NaN	2322	2443	4761
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4768	16.585	NaN	1532	30	0	339.36	0.139	+			1528	AGASFGSRSL	10	39	476.74388871555215	NaN	0	476.74371337890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AGASFGSRSL_	CON__O95678;ENSG00000170454|ENST00000252245|KRT75;KRT75|p.L391Ffs*7|1|0.2|ENSG00000170454|chr12:52428465-52428466|-/A|frameshift_variant	30.317721548370564	0.4006274431774794	4				NaN	NaN	0	NaN	2323	2443	4761
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4786	16.623	NaN	40734	30	0	6720.9	0.214				-1	 	0	89	465.7848966189691	929.5552403047383	2	465.7843322753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2338	2446	4785
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4787	16.627	NaN	2208.8	30	0	606.29	0.106	+			2227	ALSESSSS	8	39	384.1741800379299	766.3338071426598	2	384.1743469238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ALSESSSS_	ENSG00000105072|ENST00000221671|C19orf44;ENSG00000256463|ENST00000537592|SALL3;nc|ENSG00000256463|Q9BXA9-2|SALL3;nc|ENSG00000256463|Q9BXA9-3|SALL3;nc|ENSG00000256463|Q9BXA9-4|SALL3;nc|nan|Q9H6X5-2|C19orf44	14.664097394203935	0.7913966407026132	4				NaN	NaN	0	NaN	2339	2446	4785
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4788	16.629	NaN	22906	30	0	2845.3	0.106	+			38875	SSNSYAIKK	9	88	499.26812953510284	996.5217061370057	2	499.26904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSNSYAIKK_	ENSG00000083845|ENST00000196551|RPS5;ENST00000599232.1_1_19:58906030-58906114:+|nuORF	125.68205650279488	0.017759985800556374	4				NaN	NaN	0	NaN	2340	2446	4785
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4789	16.631	NaN	4974	30	0	877.09	0.106	+			44924	TVAHKIMQK	9	66	528.3056388027898	NaN	0	528.3057250976562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TVAHKIMQK_	ENSG00000134453|ENST00000379888|RBM17	58.2462437865262	0.1567987007793744	4				NaN	NaN	0	NaN	2341	2446	4785
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4790	16.632	NaN	21805	30	0	5078.1	0.106			+	38535	SSDRSTLGAAG	11	66	511.24868389846506	1020.4828148637301	2	511.2483215332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSDRSTLGAAG_	REV__ENSG00000118960|ENST00000304031|HS1BP3	62.107414245175825	0.30464354921554965	4				NaN	NaN	0	NaN	2342	2446	4785
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4791	16.634	NaN	2145.6	30	0	843.41	0.035				-1	LVPSMLATR	9	51	335.1915840678006	1002.5529228036019	3	335.1914978027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_LVPSM(Oxidation (M))LATR_	ENST00000552395.5_1_12:54854238-54867343:-|nuORF	35.61828744233558	0.47037581924408073	4				NaN	NaN	0	NaN	2343	2446	4785
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4792	16.635	NaN	7391.8	30	0	1512.7	0.141			+	-1	WQMEAEYM	8	45	552.2119851600688	1102.4094173869375	2	552.2123413085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_WQMEAEYM(Oxidation (M))_	REV__ENSG00000140990|ENST00000268668|NDUFB10;REV__ENST00000565031.1_1_16:2009625-2011290:+|nuORF;REV__nc|ENSG00000140990|O96000-2|NDUFB10	26.79610172149135	0.7524337208463756	4				NaN	NaN	0	NaN	2344	2446	4785
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4811	16.674	NaN	47854	30	0	7240.7	0.214	+			2286	ALYSGVHKK	9	85	501.7903479660638	1001.5661429989276	2	501.7901306152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ALYSGVHKK_	ENSG00000111961|ENST00000367467|SASH1;SASH1|p.N810Tfs*48|1|0.29|ENSG00000111961|chr6:148543895-148543895|A/-|frameshift_variant	123.20810148215591	0.019257656778428764	4				NaN	NaN	0	NaN	2360	2449	4810
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4812	16.677	NaN	4889.5	30	0	674.15	0.106	+			5539	AVAIKAMAK	9	63	459.7754459601578	917.5363389871156	2	459.7754821777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_AVAIKAM(Oxidation (M))AK_	EIF5A|p.A145P|1|0.15|ENSG00000132507|chr17:7311608-7311608|G/C|missense_variant;ENSG00000132507|ENST00000336458|EIF5A;ENSG00000253626|ENST00000520547|EIF5AL1;nc|ENSG00000132507|P63241-2|EIF5A	82.30502934623384	0.08758161712619916	4				NaN	NaN	0	NaN	2361	2449	4810
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4813	16.679	NaN	18386	30	0	3328.4	0.106			+	-1	HCASCCDRS	9	63	548.1921598722007	1094.3697668112013	2	548.2301635742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_HC(Carbamidomethyl (C))ASC(Carbamidomethyl (C))CDRS_	REV__ENST00000503231.1_1_12:54581064-54582478:-|nuORF;REV__ENST00000503306.5_1_12:54580675-54582743:-|nuORF;REV__ENST00000504338.5_1_12:54577692-54582653:-|nuORF;REV__ENST00000504797.1_1_12:54577692-54582653:-|nuORF;REV__ENST00000514685.5_1_12:54577692-54582633:-|nuORF	17.364965105453717	0.6112419832031293	4				NaN	NaN	0	NaN	2362	2449	4810
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4814	16.681	NaN	6927.7	30	0	1517.8	0.106				-1	MCASCLFAK	9	57	523.7287304274159	NaN	0	523.7285766601562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))CASC(Carbamidomethyl (C))LFAK_	ENST00000264276.10_1_2:202566016-202566163:-|nuORF	45.9519527083369	0.2345902329052062	4				NaN	NaN	0	NaN	2363	2449	4810
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4815	16.683	NaN	12175	30	0	2903.8	0.106				-1	SASMWWCMC	9	61	560.6897000294183	1119.3648471256365	2	560.2094116210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_SASM(Oxidation (M))WWCMC_	ENST00000520560.5_1_8:94752886-94753181:-|nuORF	19.359975847455235	0.6112419832031293	4				NaN	NaN	0	NaN	2364	2449	4810
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4816	16.685	NaN	10201	30	0	2016.4	0.106			+	8708	EEDDNICPQ	9	55	531.7044850587524	NaN	0	531.730224609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EEDDNICPQ_	REV__ENSG00000039537|ENST00000337836|C6	23.04248740728303	0.3589936788096251	4				NaN	NaN	0	NaN	2365	2449	4810
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4817	16.687	NaN	11763	30	0	2790.3	0.037				-1	DCGDWDDME	9	50	571.675255394884	1141.3359578565678	2	571.2216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_DC(Carbamidomethyl (C))GDWDDME_	ENSG00000112297|ENST00000633556|CRYBG1	3.9852391341785527	0.6112419832031293	4				NaN	NaN	0	NaN	2366	2449	4810
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4836	16.722	NaN	52477	30	0	10855	0.215	+			14404	GTAPAFKQK	9	92	474.26919188499977	946.5238308367996	2	474.26885986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTAPAFKQK_	ENSG00000065534|ENST00000360304|MYLK;ENST00000504946.5_1_3:123400948-123419770:-|nuORF;MYLK|p.P1126Qfs*8|1|0.11|ENSG00000065534|chr3:123700091-123700091|G/-|frameshift_variant;nc|ENSG00000065534|Q15746-11|MYLK;nc|ENSG00000065534|Q15746-2|MYLK;nc|ENSG00000065534|Q15746-3|MYLK;nc|ENSG00000065534|Q15746-4|MYLK;nc|ENSG00000065534|Q15746-5|MYLK;nc|ENSG00000065534|Q15746-6|MYLK;nc|ENSG00000065534|Q15746-7|MYLK	157.32903759742106	0.0051608477690748295	4				NaN	NaN	0	NaN	2382	2452	4835
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4837	16.726	NaN	12469	30	0	1757.8	0.106	+			4195	ATFSTGERK	9	75	498.7595459188656	995.5045389045313	2	498.7590637207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATFSTGERK_	ENSG00000178896|ENST00000316052|EXOSC4	52.936696900407355	0.27249468807391813	4				NaN	NaN	0	NaN	2383	2452	4835
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4838	16.728	NaN	16920	30	0	3853	0.106				-1	 	0	61	516.233332150274	1030.452111367348	2	516.233154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2384	2452	4835
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4839	16.729	NaN	60391	30	0	17440	0.106				-1	 	0	61	482.74326508610324	963.4719772390065	2	482.7430419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2385	2452	4835
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4840	16.731	NaN	13413	30	0	2031.1	0.106			+	-1	MGCGTGMECAP	11	59	565.1934248389772	1128.3722967447543	2	565.1937866210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))GC(Carbamidomethyl (C))GTGMECAP_	REV__PXDN|p.R1242Pfs*22|1|0.07|ENSG00000130508|chr2:1644636-1644637|-/AG|frameshift_variant	19.1035232394073	0.7810393085260824	4				NaN	NaN	0	NaN	2386	2452	4835
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4841	16.733	NaN	9993.1	30	0	2795.8	0.106			+	-1	HHLCCHTCC	9	53	557.1951930696355	1112.3758332060709	2	557.1959838867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_HHLC(Carbamidomethyl (C))CHTCC_	REV__ENST00000216268.5_1_22:50276984-50277221:+|nuORF	13.775330524044264	0.6112419832031292	4				NaN	NaN	0	NaN	2387	2452	4835
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4842	16.735	NaN	12683	30	0	2709.4	0.036			+	-1	TISCMPMCY	9	64	553.2148231842539	1104.4150934353077	2	553.2149047851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_TISCMPMC(Carbamidomethyl (C))Y_	REV__LRP2|p.S3514I|1|0.24|ENSG00000081479|chr2:169176441-169176441|C/A|missense_variant	31.954861631926434	0.5046124803899898	4				NaN	NaN	0	NaN	2388	2452	4835
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4856	16.763	NaN	47592	30	0	3232.2	0.214	+			5485	AVAAVAARR	9	98	442.77467344361816	883.5347939540363	2	442.7747497558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVAAVAARR_	ENSG00000089597|ENST00000356638|GANAB;ENST00000526392.1_1_11:62402291-62414071:-|nuORF;ENST00000534419.1_1_11:62407519-62414080:-|nuORF;GANAB|p.L23*|4|0.22|ENSG00000089597|chr11:62639702-62639702|A/-|frameshift_variant;nc|ENSG00000089597|Q14697-2|GANAB;nc|ENSG00000089597|Q14697-3|GANAB	187.93214206719585	0.0004997520599339083	4				NaN	NaN	0	NaN	2399	2455	4855
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4857	16.766	NaN	43499	30	0	12568	0.106				-1	TEMPMIGD	8	63	455.1884445936318	908.3623362540636	2	455.1882629394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_TEMPM(Oxidation (M))IGD_	ENSG00000004478|ENST00000001008|FKBP4	68.484700416344	0.4195245774506064	4				NaN	NaN	0	NaN	2400	2455	4855
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4858	16.769	NaN	55703	30	0	6518.1	0.106	+			38338	SRKSQLTVHQ	10	81	592.3307973286196	1182.6470417240391	2	592.330810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SRKSQLTVHQ_	ZNF577|p.M230T|1|0.26|ENSG00000161551|chr19:51873301-51873301|A/G|missense_variant	52.936696900407355	0.4300801048568001	4				NaN	NaN	0	NaN	2401	2455	4855
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4859	16.77	NaN	27172	30	0	8745.6	0.106	+			32515	QVQPVDGATRK	11	79	599.830458822036	1197.646364710872	2	599.8305053710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QVQPVDGATRK_	ENSG00000182307|ENST00000331434|C8orf33;ENST00000524395.5_1_8:146277890-146279540:+|nuORF;ENST00000530455.5_1_8:146277890-146279540:+|nuORF;ENST00000534350.5_1_8:146279384-146279540:+|nuORF;nc|nan|Q9H7E9-2|C8orf33	128.60217544463768	0.003645184319602832	4				NaN	NaN	0	NaN	2402	2455	4855
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4860	16.772	NaN	13489	30	0	1569.6	0.106			+	-1	QHASSHGAMP	10	71	519.7247958783887	1037.4350388235773	2	519.724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_QHASSHGAM(Oxidation (M))P_	REV__ENST00000442675.1_1_9:5041822-5041915:+|nuORF	34.172542307311794	0.6007644933930345	4				NaN	NaN	0	NaN	2403	2455	4855
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4861	16.774	NaN	5842.8	30	0	692.24	0.106	+			34994	SAASKVLHQ	9	63	470.76425473575983	939.5139565383197	2	470.76409912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SAASKVLHQ_	ENSG00000133962|ENST00000256343|CATSPERB;nc|ENSG00000133962|Q9H7T0-2|CATSPERB	47.657333605630114	0.33044192980041115	4				NaN	NaN	0	NaN	2404	2455	4855
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4862	16.776	NaN	7377	30	0	3759.6	0.035			+	-1	RTDSMNCY	8	53	523.7062406867753	NaN	0	523.7062377929688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_RTDSMNC(Carbamidomethyl (C))Y_	REV__ENSG00000142233|ENST00000270235|NTN5	29.14955571784316	1.7418937515398478	4				NaN	NaN	0	NaN	2405	2455	4855
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4881	16.812	NaN	19452	30	0	3144.9	0.214			+	-1	KTRKTMMVQ	9	79	577.8041200784646	1153.5936872237291	2	577.803955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_KTRKTM(Oxidation (M))M(Oxidation (M))VQ_	REV__ENST00000469448.1_1_X:118673692-118676584:-|nuORF	62.107414245175825	0.1960472003779324	4				NaN	NaN	0	NaN	2421	2458	4880
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4882	16.815	NaN	22907	30	0	3083.6	0.106	+			46111	VDGKTIKAQ	9	76	480.27968803732216	958.5448231414443	2	480.27935791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VDGKTIKAQ_	ENSG00000103769|ENST00000261890|RAB11A;ENSG00000185236|ENST00000328024|RAB11B;ENST00000598706.1_1_19:8455252-8465174:+|nuORF;nc|ENSG00000103769|P62491-2|RAB11A;nc|ENSG00000185236|Q15907-2|RAB11B;RAB11A|p.I53T|1|0.1|ENSG00000103769|chr15:65877449-65877449|T/C|missense_variant	118.74307786436346	0.02196067127630568	4				NaN	NaN	0	NaN	2422	2458	4880
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4883	16.817	NaN	4923.7	30	0	935.7	0.106	+			24434	LGCKILTEI	9	61	495.289044243702	988.563535554204	2	495.2884521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LGCKILTEI_	ENST00000512560.5_1_5:79278531-79278720:-|nuORF	28.081489160057373	0.5408112046645406	4				NaN	NaN	0	NaN	2423	2458	4880
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4884	16.819	NaN	13534	30	0	1841	0.106				-1	DCSVTCGKGMR	11	59	643.7673009001909	1285.5200488671817	2	643.7667236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C),Oxidation (M)	_DC(Carbamidomethyl (C))SVTC(Carbamidomethyl (C))GKGM(Oxidation (M))R_	ENSG00000262655|ENST00000576479|SPON1	17.468008924990375	0.788697330333842	4				NaN	NaN	0	NaN	2424	2458	4880
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4885	16.821	NaN	10947	30	0	2575.2	0.106	+			15081	GTQAIAHIHNK	11	77	595.325439453125	NaN	0	595.325439453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTQAIAHIHNK_	ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1	87.71336657091298	0.04793945875452751	4				NaN	NaN	0	NaN	2425	2458	4880
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4886	16.823	NaN	11793	30	0	2140.3	0.106			+	33170	RETSTGMGYLN	11	76	614.7845543887181	1227.5545558442361	2	614.7847900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RETSTGMGYLN_	REV__ENSG00000163114|ENST00000295266|PDHA2	30.317721548370564	0.6717830234747728	4				NaN	NaN	0	NaN	2426	2458	4880
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4887	16.824	NaN	12998	30	0	2371.9	0.04			+	-1	SHCFSKGCDIC	11	62	685.7707874564503	1369.5270219797005	2	685.7704467773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	3 Carbamidomethyl (C)	_SHC(Carbamidomethyl (C))FSKGC(Carbamidomethyl (C))DIC(Carbamidomethyl (C))_	REV__ZNF586|p.R383C|1|0.21|ENSG00000083828|chr19:57779734-57779734|C/T|missense_variant	16.006774744331256	0.795539314609425	4				NaN	NaN	0	NaN	2427	2458	4880
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4902	16.856	NaN	31060	30	0	5525.5	0.214	+			3033	ASFDKAKLKK	10	89	568.3454529281692	1134.6763529231382	2	568.3455810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASFDKAKLKK_	ENSG00000034510|ENST00000233143|TMSB10	147.73206827945663	0.008898223230177705	4				NaN	NaN	0	NaN	2439	2461	4901
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4903	16.86	NaN	18040	30	0	3630.4	0.106				-1	 	0	80	436.76330209309197	871.512051252984	2	436.7635498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2440	2461	4901
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4904	16.862	NaN	19919	30	0	4754.2	0.106				-1	SCCPVGCSKC	10	77	522.1919362371822	1042.3693195411643	2	522.192626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SCC(Carbamidomethyl (C))PVGCSKC_	ENSG00000198417|ENST00000334350|MT1F;ENST00000564295.1_1_16:56692857-56693073:+|nuORF	56.43379154798735	0.3982744522255666	4				NaN	NaN	0	NaN	2441	2461	4901
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4905	16.863	NaN	10917	30	0	2831.4	0.106	+			3034	ASFDKAKLKK	10	67	379.2323499506852	1134.6752204522556	3	379.2325439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASFDKAKLKK_	ENSG00000034510|ENST00000233143|TMSB10	47.95952297671804	0.47580206326914537	4				NaN	NaN	0	NaN	2442	2461	4901
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4906	16.865	NaN	5058.6	30	0	1428.2	0.106	+			22890	KVLVADKSG	9	65	458.77684069768287	915.5391284621658	2	458.7816162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KVLVADKSG_	ENSG00000160193|ENST00000398208|WDR4;nc|ENSG00000160193|P57081-2|WDR4	30.503639358989545	0.5181749237905803	4				NaN	NaN	0	NaN	2443	2461	4901
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4907	16.867	NaN	12692	30	0	2049.8	0.038			+	51020	YKEKFDEVL	9	72	390.8727943175164	1169.5965535527494	3	390.87310791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YKEKFDEVL_	REV__KRT3|p.K288E|1|0.46|ENSG00000186442|chr12:52794115-52794115|T/C|missense_variant	47.657333605630114	0.33044192980041115	4				NaN	NaN	0	NaN	2444	2461	4901
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4908	16.868	NaN	35462	30	0	7627.3	0.14	+			35600	SCCPMSCAK	9	91	522.1919362371822	1042.3693195411643	2	522.8297119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C)	_SCC(Carbamidomethyl (C))PMSC(Carbamidomethyl (C))AK_	ENSG00000205362|ENST00000290705|MT1A	69.6276240434122	0.14239879520340665	4				NaN	NaN	0	NaN	2445	2461	4901
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4927	16.906	NaN	7614.8	30	0	949.47	0.214	+			1233	AEREEKRVL	9	57	377.21532086581243	1128.6241331976373	3	377.215576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEREEKRVL_	ENSG00000125835|ENST00000381342|SNRPB;nc|ENSG00000125835|P14678-3|SNRPB;nc|ENSG00000125835|P14678|SNRPB	40.77816245573522	0.41113185337114944	4				NaN	NaN	0	NaN	2461	2464	4926
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4928	16.91	NaN	8615.8	30	0	1642.4	0.106				-1	SCCPVGCSKC	10	67	348.4639544336046	NaN	0	348.4638977050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SCC(Carbamidomethyl (C))PVGCSKC_	ENSG00000198417|ENST00000334350|MT1F;ENST00000564295.1_1_16:56692857-56693073:+|nuORF	19.262678746197807	0.4201028297492154	4				NaN	NaN	0	NaN	2462	2464	4926
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4929	16.912	NaN	8401.1	30	0	1538.8	0.106			+	-1	CSMTCMTQM	9	61	534.1709292440515	1066.327305554903	2	534.1723022460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Oxidation (M)	_CSM(Oxidation (M))TCMTQM(Oxidation (M))_	REV__ENST00000447467.6_1_7:95705399-95709717:+|nuORF	23.04248740728303	0.5879033540491928	4				NaN	NaN	0	NaN	2463	2464	4926
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4930	16.914	NaN	6759.5	30	0	1001.5	0.106	+			14221	GSSPTVLKK	9	69	458.77684069768287	915.5391284621658	2	458.77667236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GSSPTVLKK_	ENSG00000106009|ENST00000340611|BRAT1	75.04331003522576	0.118981335847003	4				NaN	NaN	0	NaN	2464	2464	4926
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4931	16.915	NaN	6678.4	30	0	1437.9	0.106				-1	ATWGCSKCSK	10	62	592.763427734375	NaN	0	592.763427734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C)	_ATWGC(Carbamidomethyl (C))SKC(Carbamidomethyl (C))SK_	ENST00000374301.7_1_1:26146807-26150235:+|nuORF;ENST00000424294.5_3_1:26145245-26150235:+|nuORF;ENST00000466284.1_1_1:26149474-26150235:+|nuORF;ENST00000488327.6_3_1:26146491-26150235:+|nuORF;ENST00000524618.5_1_1:26149557-26150235:+|nuORF;ENST00000525713.5_3_1:26146700-26150235:+|nuORF;ENST00000526158.5_3_1:26147049-26150235:+|nuORF;ENST00000528624.5_1_1:26149786-26150235:+|nuORF;ENST00000533762.5_3_1:26149812-26150235:+|nuORF	31.634271133179894	0.39630454568332174	4				NaN	NaN	0	NaN	2465	2464	4926
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4932	16.917	NaN	4390.8	30	0	680.4	0.035	+			15047	GTNPLNRQK	9	55	514.2858821147861	1026.557211296372	2	514.2859497070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTNPLNRQK_	ENSG00000068024|ENST00000543185|HDAC4;ENST00000460235.1_1_2:240024358-240029778:-|nuORF;ENST00000463007.5_1_2:240011659-240219867:-|nuORF;ENST00000487617.5_1_2:240002789-240024568:-|nuORF;ENST00000493582.5_1_2:240016681-240274403:-|nuORF;ENST00000535493.5_1_2:240016681-240219867:-|nuORF;HDAC4|p.M902Wfs*55|2|0.45|ENSG00000068024|chr2:239081127-239081127|G/-|frameshift_variant;nc|ENSG00000068024|P56524-2|HDAC4;nc|ENSG00000068024|P56524|HDAC4	51.19269402634007	0.2889735674168909	4				NaN	NaN	0	NaN	2466	2464	4926
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4933	16.918	NaN	5531.9	30	0	864.3	0.141			+	-1	VVCAFMFGIT	10	60	552.2650724520315	1102.515591970863	2	552.26513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_VVCAFM(Oxidation (M))FGIT_	REV__FBXO22|p.G328V|1|0.43|ENSG00000167196|chr15:75932873-75932873|G/T|missense_variant	25.450171626174864	0.6719948968573018	4				NaN	NaN	0	NaN	2467	2464	4926
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4951	16.957	NaN	6453.6	30	0	709.71	0.214			+	21983	KSEQSKLLG	9	68	495.28458294776783	NaN	0	495.28472900390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSEQSKLLG_	REV__ENST00000409177.5_1_2:106002969-106015692:-|nuORF;REV__ENST00000452732.1_1_2:106002969-106013114:-|nuORF	87.75429964447693	0.046123490950689	4				NaN	NaN	0	NaN	2482	2467	4950
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4952	16.961	NaN	1632	30	0	627.88	0.106			+	23644	LARHHPINP	9	51	352.2011989668821	NaN	0	352.201171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LARHHPINP_	REV__ENST00000558619.5_1_15:91073804-91136884:+|nuORF	24.519189625965996	0.35377483217337163	4				NaN	NaN	0	NaN	2483	2467	4950
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4953	16.963	NaN	2464.3	30	0	285.8	0.106			+	12052	GAAAAALK	8	62	336.7053853529103	671.3962177726206	2	336.70550537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GAAAAALK_	REV__ENST00000575331.1_1_17:7344165-7344471:+|nuORF	35.200714571348534	0.6875396545722289	4				NaN	NaN	0	NaN	2484	2467	4950
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4954	16.965	NaN	7393.8	30	0	1566.1	0.106	+			365	AAQTGTRWNK	10	64	566.796604893842	NaN	0	566.7969970703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AAQTGTRWNK_	ENSG00000198258|ENST00000586895|UBL5;ENST00000588141.1_1_19:9939136-9939570:+|nuORF;ENST00000588595.5_1_19:9939136-9939352:+|nuORF;ENST00000589372.1_1_19:9939013-9939570:+|nuORF	59.93077597824379	0.23484348948204886	4				NaN	NaN	0	NaN	2485	2467	4950
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4955	16.966	NaN	3361.9	30	0	772.77	0.106			+	-1	TDGVLMEY	8	48	472.20832692462125	NaN	0	472.2081604003906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_TDGVLM(Oxidation (M))EY_	REV__ENSG00000067900|ENST00000399799|ROCK1;REV__ENSG00000134318|ENST00000315872|ROCK2;REV__ROCK1|p.I1150Nfs*5|1|0.23|ENSG00000067900|chr18:20959903-20959904|-/T|frameshift_variant;REV__ROCK1|p.K1307Nfs*3|1|0.28|ENSG00000067900|chr18:20953718-20953718|T/-|frameshift_variant;REV__ROCK1|p.K818Efs*6|1|0.51|ENSG00000067900|chr18:20984387-20984388|TT/-|frameshift_variant;REV__ROCK1|p.N871Kfs*14|1|0.07|ENSG00000067900|chr18:20979951-20979952|-/T|frameshift_variant;REV__ROCK1|p.N871Tfs*5|1|0.29|ENSG00000067900|chr18:20979952-20979952|T/-|frameshift_variant;REV__ROCK1|p.P1257Lfs*3|1|0.21|ENSG00000067900|chr18:20954866-20954866|G/-|frameshift_variant;REV__ROCK2|p.K1351Sfs*17|1|0.34|ENSG00000134318|chr2:11192259-11192259|T/-|frameshift_variant;REV__ROCK2|p.S684Afs*5|1|0.34|ENSG00000134318|chr2:11211834-11211834|T/-|frameshift_variant	33.51558372728122	1.7418937515398478	4				NaN	NaN	0	NaN	2486	2467	4950
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4956	16.968	NaN	29730	30	0	9359.5	0.04				-1	TTCTYYTPTRM	11	82	697.807201701931	1393.599850470662	2	697.8057250976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_TTC(Carbamidomethyl (C))TYYTPTRM_	LYNX1|p.R50C|1|0.4|ENSG00000180155|chr8:142775599-142775599|G/A|missense_variant	18.262085536374414	0.7849791996189919	4				NaN	NaN	0	NaN	2487	2467	4950
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4957	16.969	NaN	4339.9	30	0	952.33	0.143	+			31939	QQQINQQQ	8	53	507.75108800921555	1013.4876230852311	2	507.7509460449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QQQINQQQ_	ENSG00000103460|ENST00000219746|TOX3;nc|ENSG00000103460|O15405-2|TOX3;TOX3|p.L506P|1|0.3|ENSG00000103460|chr16:52439439-52439439|A/G|missense_variant	19.359975847455235	0.7988239741663654	4				NaN	NaN	0	NaN	2488	2467	4950
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4975	17.006	NaN	13951	30	0	2787.2	0.214	+			41974	SVYAGGRGPAK	11	73	531.7882738036354	1061.5619946740708	2	531.7886352539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVYAGGRGPAK_	ENST00000296473.7_3_3:49967084-49967270:-|nuORF	104.01359247289065	0.05238957925696483	4				NaN	NaN	0	NaN	2503	2470	4974
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4976	17.01	NaN	14010	30	0	1197.3	0.106	+			17093	HSDHEFLMHYC	11	81	709.7857851361762	NaN	0	709.7854614257812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HSDHEFLMHYC_	ENSG00000157399|ENST00000381134|ARSL	34.172542307311794	0.4131234684587831	4				NaN	NaN	0	NaN	2504	2470	4974
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4977	17.012	NaN	3162.7	30	0	369.82	0.106				-1	LLPLLLLL	8	59	475.33756548959576	NaN	0	475.7792053222656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LLPLLLLL_	CNPY3|p.D276*|1|0.32|ENSG00000137161|chr6:42938772-42938773|-/C|frameshift_variant;CPAMD8|p.G174Afs*21|1|0.29|ENSG00000160111|chr19:17011645-17011645|C/-|frameshift_variant;CPAMD8|p.H1052Afs*30|1|0.33|ENSG00000160111|chr19:16929073-16929074|-/C|frameshift_variant;CPAMD8|p.H1052Ifs*127|3|0.34|ENSG00000160111|chr19:16929074-16929074|C/-|frameshift_variant;CPAMD8|p.H593Lfs*4|1|0.13|ENSG00000160111|chr19:16977489-16977489|T/-|frameshift_variant;CPAMD8|p.M1571Cfs*32|1|0.32|ENSG00000160111|chr19:16902765-16902765|G/-|frameshift_variant;CRLF1|p.E86*|1|0.35|ENSG00000006016|chr19:18599707-18599708|-/G|frameshift_variant;DCHS1|p.G1030Afs*31|1|0.16|ENSG00000166341|chr11:6632423-6632423|C/-|frameshift_variant;DCHS1|p.G2765Rfs*10|1|0.26|ENSG00000166341|chr11:6623383-6623384|-/T|frameshift_variant;DCHS1|p.H2834Sfs*7|1|0.44|ENSG00000166341|chr11:6623177-6623178|-/C|frameshift_variant;DCHS1|p.Q374Pfs*4|1|0.4|ENSG00000166341|chr11:6640493-6640494|-/G|frameshift_variant;ENSG00000006016|ENST00000392386|CRLF1;ENSG00000011422|ENST00000340093|PLAUR;ENSG00000099617|ENST00000215368|EFNA2;ENSG00000104805|ENST00000405315|NUCB1;ENSG00000105290|ENST00000221891|APLP1;ENSG00000106868|ENST00000374270|SUSD1;ENSG00000115457|ENST00000233809|IGFBP2;ENSG00000121716|ENST00000609309|PILRB;ENSG00000122679|ENST00000242249|RAMP3;ENSG00000127578|ENST00000319070|WFIKKN1;ENSG00000130175|ENST00000677123|PRKCSH;ENSG00000132334|ENST00000254667|PTPRE;ENSG00000137142|ENST00000377694|IGFBPL1;ENSG00000137161|ENST00000372836|CNPY3;ENSG00000143554|ENST00000624995|SLC27A3;ENSG00000149930|ENST00000308893|TAOK2;ENSG00000160111|ENST00000443236|CPAMD8;ENSG00000161638|ENST00000293379|ITGA5;ENSG00000164054|ENST00000296444|SHISA5;ENSG00000164530|ENST00000373674|PI16;ENSG00000164897|ENST00000297533|TMUB1;ENSG00000166033|ENST00000368984|HTRA1;ENSG00000166341|ENST00000299441|DCHS1;ENSG00000168140|ENST00000304735|VASN;ENSG00000174498|ENST00000327987|IGDCC3;ENSG00000180044|ENST00000326474|C3orf80;ENSG00000182853|ENST00000328739|VMO1;ENSG00000184164|ENST00000328268|CRELD2;ENSG00000243232|ENST00000289269|PCDHAC2;ENST00000302351.8_1_5:73936651-73937086:-|nuORF;ENST00000468403.1_1_1:153747811-153748660:+|nuORF;ENST00000483652.5_1_22:50312390-50319315:+|nuORF;ENST00000490362.1_1_2:217498183-217525611:+|nuORF;ENST00000534096.5_1_19:50838046-50848012:-|nuORF;ENST00000534789.5_1_19:50838228-50848012:-|nuORF;ENST00000598875.1_1_19:44169462-44174272:-|nuORF;ENST00000601876.1_1_19:44171370-44174272:-|nuORF;IGDCC3|p.P522Lfs*71|1|0.48|ENSG00000174498|chr15:65330738-65330738|G/-|frameshift_variant;IGDCC3|p.P723Rfs*37|2|0.31|ENSG00000174498|chr15:65329427-65329427|G/-|frameshift_variant;ITGA5|p.L399Wfs*26|2|0.4|ENSG00000161638|chr12:54405196-54405196|G/-|frameshift_variant;ITGA5|p.P34L|1|0.26|ENSG00000161638|chr12:54419098-54419098|G/A|missense_variant;ITGA5|p.Y300Afs*75|1|0.46|ENSG00000161638|chr12:54407655-54407658|GTAA/-|frameshift_variant;nc|ENSG00000011422|Q03405-2|PLAUR;nc|ENSG00000011422|Q03405-3|PLAUR;nc|ENSG00000105290|P51693|APLP1;nc|ENSG00000106868|Q6UWL2-2|SUSD1;nc|ENSG00000106868|Q6UWL2-3|SUSD1;nc|ENSG00000110076|P58401|NRXN2;nc|ENSG00000121716|Q9UKJ0-2|PILRB;nc|ENSG00000121716|Q9UKJ0-3|PILRB;nc|ENSG00000130175|P14314-2|PRKCSH;nc|ENSG00000130175|P14314|PRKCSH;nc|ENSG00000137161|Q9BT09-2|CNPY3;nc|ENSG00000143554|Q5K4L6-2|SLC27A3;nc|ENSG00000143554|Q5K4L6-3|SLC27A3;nc|ENSG00000149930|Q9UL54-3|TAOK2;nc|ENSG00000149930|Q9UL54-4|TAOK2;nc|ENSG00000157168|Q02297-9|NRG1;nc|ENSG00000160111|Q8IZJ3-2|CPAMD8;nc|ENSG00000164054|Q8N114-5|SHISA5;nc|ENSG00000164530|Q6UXB8-2|PI16;nc|ENSG00000182853|Q7Z5L0-2|VMO1;nc|ENSG00000182853|Q7Z5L0-3|VMO1;nc|ENSG00000182853|Q7Z5L0-4|VMO1;nc|ENSG00000184164|Q6UXH1-2|CRELD2;nc|ENSG00000184164|Q6UXH1-3|CRELD2;nc|ENSG00000184164|Q6UXH1-4|CRELD2;nc|ENSG00000184164|Q6UXH1-5|CRELD2;nc|ENSG00000184164|Q6UXH1-6|CRELD2;nc|ENSG00000243232|Q9Y5I4-2|PCDHAC2;nc|ENSG00000254402|Q50LG9|LRRC24;PCDHAC2|p.Y622Lfs*8|1|0.23|ENSG00000243232|chr5:140968624-140968625|-/T|frameshift_variant;PRKCSH|p.P345Rfs*40|1|0.3|ENSG00000130175|chr19:11447714-11447714|C/-|frameshift_variant;RAMP3|p.P115Qfs*8|1|0.42|ENSG00000122679|chr7:45183304-45183304|C/-|frameshift_variant;REV__CYP21A2|p.V306Afs*8|1|0.05|ENSG00000231852|chr6:32040182-32040183|-/C|frameshift_variant;REV__ENSG00000090530|ENST00000319332|P3H2;REV__ENSG00000099999|ENST00000382363|RNF215;REV__ENSG00000105366|ENST00000321424|SIGLEC8;REV__ENSG00000105383|ENST00000262262|CD33;REV__ENSG00000121316|ENST00000240617|PLBD1;REV__ENSG00000123384|ENST00000243077|LRP1;REV__ENSG00000129450|ENST00000250360|SIGLEC9;REV__ENSG00000131400|ENST00000253719|NAPSA;REV__ENSG00000132470|ENST00000200181|ITGB4;REV__ENSG00000136928|ENST00000259455|GABBR2;REV__ENSG00000137142|ENST00000377694|IGFBPL1;REV__ENSG00000143554|ENST00000624995|SLC27A3;REV__ENSG00000149930|ENST00000308893|TAOK2;REV__ENSG00000163704|ENST00000412055|PRRT3;REV__ENSG00000165731|ENST00000355710|RET;REV__ENSG00000168995|ENST00000317643|SIGLEC7;REV__ENSG00000173706|ENST00000311127|HEG1;REV__ENSG00000184232|ENST00000328965|OAF;REV__ENSG00000231852|ENST00000644719|CYP21A2;REV__ENST00000300853.7_1_19:45912690-45912933:-|nuORF;REV__ENST00000374369.7_1_20:34025707-34025902:-|nuORF;REV__ENST00000468403.1_1_1:153747811-153748660:+|nuORF;REV__ENST00000534096.5_1_19:50838046-50848012:-|nuORF;REV__ENST00000534789.5_1_19:50838228-50848012:-|nuORF;REV__ENST00000554295.1_1_12:98850353-98850914:-|nuORF;REV__ENST00000580542.5_1_17:73720783-73737087:+|nuORF;REV__ENST00000596653.1_1_19:50865389-50868878:-|nuORF;REV__ENST00000602065.5_1_19:51714364-51714690:+|nuORF;REV__HEG1|p.H603Sfs*5|1|0.29|ENSG00000173706|chr3:125013772-125013773|-/A|frameshift_variant;REV__HEG1|p.P916Lfs*2|1|0.07|ENSG00000173706|chr3:125012832-125012832|G/-|frameshift_variant;REV__HEG1|p.S1105Qfs*21|1|0.12|ENSG00000173706|chr3:125002300-125002300|A/-|frameshift_variant;REV__ITGB4|p.A1304Pfs*140|1|0.27|ENSG00000132470|chr17:75752287-75752287|G/-|frameshift_variant;REV__ITGB4|p.P1123Lfs*37|1|0.47|ENSG00000132470|chr17:75750158-75750158|C/-|frameshift_variant;REV__ITGB4|p.T1720Rfs*13|1|0.05|ENSG00000132470|chr17:75757046-75757052|GACCACT/-|frameshift_variant;REV__LRP1|p.D1283Ifs*50|1|0.09|ENSG00000123384|chr12:57175962-57175962|G/-|frameshift_variant;REV__LRP1|p.D1366Rfs*54|1|0.17|ENSG00000123384|chr12:57177143-57177144|-/CA|frameshift_variant;REV__LRP1|p.F339Sfs*71|1|0.32|ENSG00000123384|chr12:57154486-57154486|T/-|frameshift_variant;REV__LRP1|p.N939Tfs*41|2|0.2|ENSG00000123384|chr12:57166940-57166940|C/-|frameshift_variant;REV__LRP1|p.R3469Gfs*24|2|0.38|ENSG00000123384|chr12:57201552-57201552|C/-|frameshift_variant;REV__nc|ENSG00000105366|Q9NYZ4-2|SIGLEC8;REV__nc|ENSG00000105366|Q9NYZ4-3|SIGLEC8;REV__nc|ENSG00000105383|P20138-2|CD33;REV__nc|ENSG00000105383|P20138-3|CD33;REV__nc|ENSG00000123384|Q07954-2|LRP1;REV__nc|ENSG00000129450|Q9Y336-2|SIGLEC9;REV__nc|ENSG00000132470|P16144-2|ITGB4;REV__nc|ENSG00000132470|P16144-3|ITGB4;REV__nc|ENSG00000132470|P16144-4|ITGB4;REV__nc|ENSG00000132470|P16144-5|ITGB4;REV__nc|ENSG00000143554|Q5K4L6-2|SLC27A3;REV__nc|ENSG00000143554|Q5K4L6-3|SLC27A3;REV__nc|ENSG00000149930|Q9UL54-3|TAOK2;REV__nc|ENSG00000149930|Q9UL54-4|TAOK2;REV__nc|ENSG00000163704|Q5FWE3-3|PRRT3;REV__nc|ENSG00000165731|P07949-2|RET;REV__nc|ENSG00000168995|Q9Y286-2|SIGLEC7;REV__nc|ENSG00000168995|Q9Y286-3|SIGLEC7;REV__nc|ENSG00000168995|Q9Y286-4|SIGLEC7;REV__nc|ENSG00000173706|Q9ULI3-2|HEG1;REV__nc|ENSG00000231852|P08686-2|CYP21A2;REV__P3H2|p.V176Rfs*3|1|0.25|ENSG00000090530|chr3:189995398-189995399|-/A|frameshift_variant;REV__PLBD1|p.N214Tfs*4|1|0.06|ENSG00000121316|chr12:14536628-14536628|T/-|frameshift_variant;REV__SIGLEC8|p.G366Efs*18|1|0.16|ENSG00000105366|chr19:51454735-51454735|C/-|frameshift_variant;REV__SLC27A3|p.F459Lfs*16|1|0.57|ENSG00000143554|chr1:153778232-153778232|T/-|frameshift_variant;REV__SLC27A3|p.P210Lfs*73|1|0.43|ENSG00000143554|chr1:153775982-153775982|C/-|frameshift_variant;REV__SLC27A3|p.Q324Rfs*3|1|0.37|ENSG00000143554|chr1:153776674-153776674|C/-|frameshift_variant;REV__TAOK2|p.G983Vfs*50|1|0.43|ENSG00000149930|chr16:29987216-29987216|G/-|frameshift_variant;SLC27A3|p.F459Lfs*16|1|0.57|ENSG00000143554|chr1:153778232-153778232|T/-|frameshift_variant;SLC27A3|p.P210Lfs*73|1|0.43|ENSG00000143554|chr1:153775982-153775982|C/-|frameshift_variant;SLC27A3|p.Q324Rfs*3|1|0.37|ENSG00000143554|chr1:153776674-153776674|C/-|frameshift_variant;SUSD1|p.F594Lfs*13|1|0.16|ENSG00000106868|chr9:112063005-112063005|A/-|frameshift_variant;TAOK2|p.G983Vfs*50|1|0.43|ENSG00000149930|chr16:29987216-29987216|G/-|frameshift_variant;VASN|p.I115Nfs*4|1|0.34|ENSG00000168140|chr16:4381217-4381218|-/A|frameshift_variant;VASN|p.R542Gfs*86|1|0.42|ENSG00000168140|chr16:4382495-4382495|C/-|frameshift_variant	10.184766708764876	1.7418937515398478	4				NaN	NaN	0	NaN	2505	2470	4974
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4978	17.014	NaN	8476.3	30	0	1634.1	0.106			+	9810	EPFPMIEK	8	61	495.75136929042174	989.4881856476435	2	495.7508544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EPFPMIEK_	REV__ENAM|p.S1035Kfs*7|1|0.08|ENSG00000132464|chr4:70644526-70644527|-/A|frameshift_variant;REV__ENSG00000132464|ENST00000396073|ENAM	58.78195531508484	0.5138399468736706	4				NaN	NaN	0	NaN	2506	2470	4974
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4979	17.016	NaN	8108.6	30	0	1428	0.106	+			5420	ATYHGSFSTKK	11	64	613.8121337890625	NaN	0	613.8121337890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATYHGSFSTKK_	ENSG00000163359|ENST00000295550|COL6A3;ENST00000491769.1_1_2:238233419-238250825:-|nuORF;ENST00000493608.1_1_2:238242084-238243404:-|nuORF;nc|ENSG00000163359|P12111-2|COL6A3;nc|ENSG00000163359|P12111-4|COL6A3	26.063383197487333	0.44926255568796863	4				NaN	NaN	0	NaN	2507	2470	4974
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4980	17.017	NaN	5165	30	0	1064.6	0.036	+			37827	SMSASVHPNK	10	58	529.2582021156521	1056.5018512981042	2	529.2587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SMSASVHPNK_	ENSG00000072518|ENST00000402010|MARK2;MARK2|p.Q563Sfs*53|1|0.41|ENSG00000072518|chr11:63904791-63904791|C/-|frameshift_variant;MARK2|p.T549Rfs*67|2|0.4|ENSG00000072518|chr11:63904110-63904110|C/-|frameshift_variant;nc|ENSG00000072518|Q7KZI7-11|MARK2;nc|ENSG00000072518|Q7KZI7-12|MARK2;nc|ENSG00000072518|Q7KZI7-14|MARK2;nc|ENSG00000072518|Q7KZI7-3|MARK2;nc|ENSG00000072518|Q7KZI7-6|MARK2;nc|ENSG00000072518|Q7KZI7-8|MARK2	51.19269402634007	0.44601001148513897	4				NaN	NaN	0	NaN	2508	2470	4974
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4981	17.018	NaN	7092.3	30	0	1660.2	0.142	+			30774	QDSGTKAFCNV	11	57	585.2666015625	NaN	0	585.2666015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QDSGTKAFCNV_	ENST00000551766.5_1_16:22437686-22447115:-|nuORF;ENST00000569045.1_1_16:22376319-22447115:-|nuORF	21.68575002086885	0.456735970842152	4				NaN	NaN	0	NaN	2509	2470	4974
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	4999	17.057	NaN	27025	30	0	4787	0.214	+			23078	KVVDLANKK	9	81	507.8188883374068	1013.6232237416136	2	507.8187255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVVDLANKK_	ENSG00000104413|ENST00000433389|ESRP1;ESRP1|p.L333Sfs*55|1|0.35|ENSG00000104413|chr8:94668009-94668009|G/-|frameshift_variant;ESRP1|p.N512Hfs*7|2|0.33|ENSG00000104413|chr8:94674383-94674384|AA/-|frameshift_variant;ESRP1|p.N512Kfs*8|1|0.48|ENSG00000104413|chr8:94674382-94674383|-/A|frameshift_variant;ESRP1|p.N512Tfs*2|2|0.36|ENSG00000104413|chr8:94674383-94674383|A/-|frameshift_variant;nc|ENSG00000104413|Q6NXG1-2|ESRP1;nc|ENSG00000104413|Q6NXG1-3|ESRP1;nc|ENSG00000104413|Q6NXG1-4|ESRP1;nc|ENSG00000104413|Q6NXG1-5|ESRP1	205.58602605338345	9.687353195239102E-06	4				NaN	NaN	0	NaN	2524	2473	4998
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5000	17.061	NaN	7228.3	30	0	1109.8	0.106	+			36793	SICKGLNNK	9	70	517.2766358464921	1032.5387187597842	2	517.2764892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SIC(Carbamidomethyl (C))KGLNNK_	ENST00000294753.8_1_1:247493325-247494987:-|nuORF	118.74307786436346	0.02196067127630568	4				NaN	NaN	0	NaN	2525	2473	4998
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5001	17.063	NaN	10520	30	0	1122	0.106	+			31140	QGESHDRHF	9	76	556.7468045623677	1111.4790561915354	2	556.7470092773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QGESHDRHF_	ENST00000265594.8_1_3:182755007-182755076:-|nuORF	50.033510581677724	0.3025703251535696	4				NaN	NaN	0	NaN	2526	2473	4998
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5002	17.065	NaN	2216	30	0	410.8	0.106	+			32177	QSSHLNVH	8	47	461.23017314624906	NaN	0	461.23004150390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QSSHLNVH_	ENSG00000083814|ENST00000317398|ZNF671;ENSG00000188629|ENST00000683217|ZNF177;ENSG00000270011|ENST00000541595|ZNF559-ZNF177	35.61828744233558	1.7418937515398478	4				NaN	NaN	0	NaN	2527	2473	4998
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5003	17.066	NaN	4611.9	30	0	1880	0.106				-1	GEKSYECAE	9	48	536.7141723632812	NaN	0	536.7141723632812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_GEKSYEC(Carbamidomethyl (C))AE_	ENSG00000245680|ENST00000532828|ZNF585B	20.94693142431847	0.3660861156085067	4				NaN	NaN	0	NaN	2528	2473	4998
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5004	17.068	NaN	4605.3	30	0	443.97	0.03	+			10763	FAGAKGGG	8	64	332.6741024513084	663.3336519694168	2	332.6741943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FAGAKGGG_	ENST00000424404.1_1_7:121947107-121947290:+|nuORF	4.6817480819748125	0.7764044737779935	4				NaN	NaN	0	NaN	2529	2473	4998
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5005	17.069	NaN	1362.6	30	0	168.85	0.14	+			2696	AQPLHLQCP	9	44	336.17602894660376	NaN	0	336.1761169433594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AQPLHLQCP_	ENSG00000173421|ENST00000452691|IHO1;nc|ENSG00000173421|Q8IYA8-2|IHO1	25.57405402267927	0.3484490411150625	4				NaN	NaN	0	NaN	2530	2473	4998
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5023	17.108	NaN	11494	30	0	2294.8	0.214			+	-1	TMEPMEVG	8	59	455.1884445936318	908.3623362540636	2	455.1882629394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_TMEPM(Oxidation (M))EVG_	REV__sp|F5HF35|UL136_HCMVMProteinUL136OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL136PE=1SV=1	40.5726180659479	0.6527593143185008	4				NaN	NaN	0	NaN	2545	2476	5022
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5024	17.112	NaN	9774.9	30	0	1548.9	0.106	+			49159	VVMGKQQSKLK	11	77	623.370849609375	NaN	0	623.370849609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVMGKQQSKLK_	ENSG00000148225|ENST00000374193|WDR31;nc|ENSG00000148225|Q8NA23-2|WDR31	91.46909648831856	0.04403184193194228	4				NaN	NaN	0	NaN	2546	2476	5022
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5025	17.114	NaN	6723.2	30	0	737.86	0.106	+			31130	QGDFLPGCEG	10	64	511.7181175354614	1021.4216821377228	2	511.7176513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QGDFLPGCEG_	nc|ENSG00000102796|A0PJE2-2|DHRS12	44.377184641726394	0.5088115166961078	4				NaN	NaN	0	NaN	2547	2476	5022
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5026	17.115	NaN	6114.6	30	0	1570	0.106	+			35759	SDVMKKYKK	9	63	563.8184210372385	1125.622289141277	2	563.8184204101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SDVMKKYKK_	tr|U7T8D7|U7T8D7_FUSNUTypeIVsecretionsystemproteinVirD4OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00019PE=3SV=1	38.80614096846853	0.43426287593479557	4				NaN	NaN	0	NaN	2548	2476	5022
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5027	17.117	NaN	8730.4	30	0	2462.3	0.106	+			38258	SQNPRFYHK	9	70	588.7994158729674	1175.5842788127347	2	588.7996215820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SQNPRFYHK_	ENSG00000132522|ENST00000380728|GPS2;ENST00000571697.5_1_17:7216077-7216449:-|nuORF;ENST00000573807.5_1_17:7216077-7216773:-|nuORF;ENST00000574458.1_1_17:7216077-7216212:-|nuORF	85.86182877749512	0.07653218437724067	4				NaN	NaN	0	NaN	2549	2476	5022
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5028	17.119	NaN	1418.3	30	0	139.65	0.037			+	25592	LQIFLLPDK	9	41	362.8887634277344	NaN	0	362.8887634277344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LQIFLLPDK_	REV__ENSG00000113073|ENST00000506757|SLC4A9;REV__nc|ENSG00000113073|Q96Q91-2|SLC4A9;REV__nc|ENSG00000113073|Q96Q91-4|SLC4A9;REV__nc|ENSG00000113073|Q96Q91|SLC4A9;REV__SLC4A9|p.G388Afs*73|1|0.34|ENSG00000113073|chr5:140363735-140363735|G/-|frameshift_variant;REV__SLC4A9|p.L208Pfs*18|1|0.47|ENSG00000113073|chr5:140361846-140361847|-/C|frameshift_variant;REV__SLC4A9|p.L913Sfs*28|1|0.3|ENSG00000113073|chr5:140371615-140371615|C/-|frameshift_variant	22.579656572578934	0.3605601358598771	4				NaN	NaN	0	NaN	2550	2476	5022
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5029	17.12	NaN	6700.5	30	0	1439.1	0.142			+	33505	RKMDPLKLY	9	67	582.3361369277816	1162.657720922363	2	582.3358764648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RKMDPLKLY_	REV__ENST00000482108.1_2_7:94296640-94296796:+|nuORF	60.97194046774394	0.20551255781574032	4				NaN	NaN	0	NaN	2551	2476	5022
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5047	17.159	NaN	12378	30	0	2174	0.214	+			3076	ASFSKRIQK	9	78	532.8144063531048	NaN	0	532.814453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASFSKRIQK_	ENSG00000164105|ENST00000296504|SAP30	61.691277971877994	0.14210560126578747	4				NaN	NaN	0	NaN	2566	2479	5046
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5048	17.163	NaN	9144.4	30	0	3600.4	0.106	+			15067	GTPESVQSAK	10	69	502.256568765644	1002.498584598088	2	502.2562561035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTPESVQSAK_	ENSG00000162613|ENST00000370768|FUBP1;FUBP1|p.I301Yfs*22|2|0.26|ENSG00000162613|chr1:77964293-77964293|T/-|frameshift_variant;nc|ENSG00000162613|Q96AE4-2|FUBP1	51.52775601994872	0.4429225830406686	4				NaN	NaN	0	NaN	2567	2479	5046
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5049	17.165	NaN	6436.5	30	0	2188.9	0.106			+	44091	TPTPGTGLNI	10	51	324.1789422114273	969.5149972344818	3	324.1798400878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TPTPGTGLNI_	REV__MMP2|p.D452N|1|0.2|ENSG00000087245|chr16:55493175-55493175|G/A|missense_variant	20.94693142431847	0.7087701759873708	4				NaN	NaN	0	NaN	2568	2479	5046
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5050	17.166	NaN	4491.7	30	0	715.2	0.106			+	22396	KTINGFSSI	9	63	483.76656705102135	965.5185811688427	2	483.7662048339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTINGFSSI_	REV__ENST00000263239.6_1_2:118589017-118589167:+|nuORF	62.107414245175825	0.1960472003779324	4				NaN	NaN	0	NaN	2569	2479	5046
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5051	17.168	NaN	2829.5	30	0	574.09	0.106				-1	 	0	47	359.0266719700498	358.0193955034498	1	359.0284423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2570	2479	5046
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5052	17.17	NaN	3651.3	30	0	482.93	0.034	+			22867	KVKVSDPR	8	62	464.7821236997928	NaN	0	464.7820739746094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KVKVSDPR_	ENST00000473822.5_1_1:111746941-111747067:-|nuORF	71.29570347882199	1.7418937515398478	4				NaN	NaN	0	NaN	2571	2479	5046
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5053	17.171	NaN	3694.1	30	0	641.97	0.14			+	-1	YHVDMVGAD	9	49	511.7181175354614	1021.4216821377228	2	511.7156066894531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_YHVDM(Oxidation (M))VGAD_	REV__DOCK11|p.M1685V|1|0.62|ENSG00000147251|chrX:118662769-118662769|A/G|missense_variant	25.450171626174864	0.5654022654467333	4				NaN	NaN	0	NaN	2572	2479	5046
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5071	17.21	NaN	26804	30	0	3631.2	0.214	+			5089	ATSNVHMVK	9	86	493.7583661134383	985.5021792936766	2	493.7579650878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSNVHMVK_	ENSG00000197256|ENST00000586659|KANK2;ENST00000590400.1_1_19:11303345-11305238:-|nuORF;KANK2|p.P430Rfs*5|1|0.23|ENSG00000197256|chr19:11178681-11178681|G/-|frameshift_variant;nc|ENSG00000197256|Q63ZY3-2|KANK2;nc|ENSG00000197256|Q63ZY3-3|KANK2	117.81106730687013	0.02252488733980868	4				NaN	NaN	0	NaN	2587	2482	5070
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5072	17.214	NaN	38449	30	0	5782.6	0.106	+			13731	GQATFQQSK	9	89	497.7509187291967	NaN	0	497.7508850097656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GQATFQQSK_	ENST00000429772.6_1_12:48357429-48359073:+|nuORF	177.3047273071476	0.005321040389749554	4				NaN	NaN	0	NaN	2588	2482	5070
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5073	17.216	NaN	6264.1	30	0	777.5	0.106	+			5549	AVALPPTHKK	10	68	531.3270188206717	1060.6394847081433	2	531.3272705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVALPPTHKK_	ENSG00000104881|ENST00000360957|PPP1R13L;PPP1R13L|p.P562Afs*10|1|0.56|ENSG00000104881|chr19:45392011-45392012|-/C|frameshift_variant	42.86426827375447	0.522752283233888	4				NaN	NaN	0	NaN	2589	2482	5070
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5074	17.217	NaN	5932.5	30	0	838.49	0.106			+	38358	SRPLPQPD	8	64	455.2430233421683	908.4714937511367	2	455.2427978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SRPLPQPD_	REV__ENST00000380359.3_1_10:5493865-5494450:+|nuORF	95.81516180277367	0.2598660847282228	4				NaN	NaN	0	NaN	2590	2482	5070
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5075	17.219	NaN	6864.7	30	0	1810.6	0.106	+			32542	QVSSFISAKS	10	63	527.2815202632002	1052.5484875932002	2	527.2822875976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QVSSFISAKS_	ENST00000302806.5_1_4:48621203-48655803:-|nuORF	45.97224482568171	0.49411383603842696	4				NaN	NaN	0	NaN	2591	2482	5070
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5076	17.221	NaN	4793.8	30	0	586.14	0.036			+	49972	WAELLCFQ	8	67	533.753489078991	NaN	0	533.8042602539062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_WAELLC(Carbamidomethyl (C))FQ_	REV__ENST00000323646.9_1_11:63341157-63341505:-|nuORF	60.29395666154354	1.7418937515398478	4				NaN	NaN	0	NaN	2592	2482	5070
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5077	17.222	NaN	7470.2	30	0	1631	0.143				-1	MQLSQCAKNL	10	56	596.7926025390625	NaN	0	596.7926025390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_MQLSQC(Carbamidomethyl (C))AKNL_	ENSG00000137076|ENST00000314888|TLN1;ENSG00000171914|ENST00000636159|TLN2;nc|ENSG00000137076|Q9Y490-2|TLN1;TLN1|p.P1628Rfs*20|1|0.44|ENSG00000137076|chr9:35707144-35707144|G/-|frameshift_variant	25.57405402267927	0.4162033004763879	4				NaN	NaN	0	NaN	2593	2482	5070
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5095	17.261	NaN	106330	30	0	39499	0.214			+	15761	GVSTACLM	8	85	391.18204126550984	780.3495295978197	2	391.1823425292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVSTACLM_	REV__ENST00000411788.5_1_7:80535172-80545997:-|nuORF	37.028477286268924	0.6747514403204248	4				NaN	NaN	0	NaN	2608	2485	5094
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5096	17.265	NaN	11842	30	0	1143.6	0.106			+	31898	QQFWAQQQ	8	84	532.2534051203019	NaN	0	532.25341796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QQFWAQQQ_	REV__HELZ|p.R1514W|1|0.34|ENSG00000198265|chr17:67108676-67108676|G/A|missense_variant	85.35947970620816	1.7418937515398478	4				NaN	NaN	0	NaN	2609	2485	5094
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5097	17.267	NaN	14427	30	0	2288.1	0.106			+	30807	QEATPFYY	8	74	509.7307452366923	1017.4469375401846	2	509.7307434082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QEATPFYY_	REV__ENSG00000186767|ENST00000374884|SPIN4	55.50420428727701	0.5462892107279674	4				NaN	NaN	0	NaN	2610	2485	5094
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5098	17.268	NaN	11550	30	0	1432.3	0.106			+	12548	GEGGAEPVESL	11	73	522.7473696252166	1043.4801863172331	2	522.747314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEGGAEPVESL_	REV__APOBR|p.L868Ffs*2|1|0.24|ENSG00000184730|chr16:28497664-28497664|G/-|frameshift_variant;REV__ENSG00000184730|ENST00000564831|APOBR;REV__nc|ENSG00000184730|Q0VD83-2|APOBR;REV__nc|ENSG00000184730|Q0VD83-3|APOBR	30.317721548370564	0.6717830234747728	4				NaN	NaN	0	NaN	2611	2485	5094
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5099	17.27	NaN	6702.7	30	0	2009.8	0.106	+			31379	QKGHELVLA	9	71	332.19401358068274	993.5602113422483	3	332.1941223144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QKGHELVLA_	ENSG00000112655|ENST00000230419|PTK7;nc|ENSG00000112655|Q13308-2|PTK7;nc|ENSG00000112655|Q13308-3|PTK7;nc|ENSG00000112655|Q13308-4|PTK7;nc|ENSG00000112655|Q13308-5|PTK7;nc|ENSG00000112655|Q13308-6|PTK7;PTK7|p.D618Gfs*36|1|0.42|ENSG00000112655|chr6:43142009-43142010|-/G|frameshift_variant;PTK7|p.P510Hfs*39|1|0.35|ENSG00000112655|chr6:43139435-43139435|C/-|frameshift_variant	18.324413293986947	0.6112419832031293	4				NaN	NaN	0	NaN	2612	2485	5094
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5100	17.272	NaN	3962.8	30	0	903.4	0.036			+	13672	GPARQKLSNA	10	47	347.8634014218819	1040.5683748658457	3	347.8647766113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GPARQKLSNA_	REV__ENSG00000105221|ENST00000392038|AKT2;REV__ENST00000391844.8_1_19:40739781-40791100:-|nuORF;REV__ENST00000487537.2_1_19:40747718-40761168:-|nuORF;REV__ENST00000537834.5_1_19:40745726-40771198:-|nuORF;REV__nc|ENSG00000105221|P31751-2|AKT2	28.081489160057373	0.6505064946289502	4				NaN	NaN	0	NaN	2613	2485	5094
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5101	17.273	NaN	5445	30	0	1550.2	0.141	+			7424	DERLIYKP	8	67	345.19384713364366	1032.559712001131	3	345.1940002441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DERLIYKP_	ENSG00000101166|ENST00000355937|PRELID3B;ENST00000431957.1_1_7:126935711-126936140:+|nuORF;nc|ENSG00000101166|Q9Y3B1-2|PRELID3B	38.80614096846853	0.6637206697844082	4				NaN	NaN	0	NaN	2614	2485	5094
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5119	17.311	NaN	11518	30	0	1811.3	0.214	+			50713	YEFTEEAQ	8	74	508.7136666613796	1015.4127803895592	2	508.7138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YEFTEEAQ_	ENST00000261653.10_1_12:131276234-131276321:-|nuORF	37.15910966729921	0.6739408393984688	4				NaN	NaN	0	NaN	2629	2488	5118
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5120	17.315	NaN	11642	30	0	1787.4	0.106	+			39430	STDVSHCVK	9	71	488.23253049853025	974.4505080638605	2	488.23162841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STDVSHCVK_	ENSG00000166750|ENST00000299977|SLFN5;nc|ENSG00000166750|Q08AF3-2|SLFN5;SLFN5|p.P698Lfs*21|1|0.46|ENSG00000166750|chr17:35265300-35265300|C/-|frameshift_variant;SLFN5|p.Q524Sfs*11|1|0.73|ENSG00000166750|chr17:35264609-35264609|C/-|frameshift_variant	162.25246889848123	0.0040893836092247005	4				NaN	NaN	0	NaN	2630	2488	5118
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5121	17.317	NaN	4948.8	30	0	535.55	0.106			+	9091	EGIRACKW	8	61	481.74848915738465	961.4824253815693	2	481.748291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EGIRACKW_	REV__ENSG00000174695|ENST00000502346|TMEM167A	53.351449002276354	0.5676011784961348	4				NaN	NaN	0	NaN	2631	2488	5118
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5122	17.319	NaN	14922	30	0	3632.2	0.106				-1	CLPLTRDH	8	70	506.2559752493921	1010.4973975655843	2	506.2557678222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_C(Carbamidomethyl (C))LPLTRDH_	ENSG00000172840|ENST00000311765|PDP2	35.200714571348534	0.6875396545722289	4				NaN	NaN	0	NaN	2632	2488	5118
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5123	17.321	NaN	10869	30	0	2076.7	0.106	+			36851	SIFHQKAEK	9	68	544.2986822216664	1086.5828115101326	2	544.2987060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SIFHQKAEK_	ENSG00000038382|ENST00000344204|TRIO;ENST00000504606.1_1_5:14291106-14297405:+|nuORF;ENST00000515144.5_1_5:14293150-14488426:+|nuORF;nc|ENSG00000038382|O75962-2|TRIO;nc|ENSG00000038382|O75962-4|TRIO;nc|ENSG00000038382|O75962-5|TRIO;TRIO|p.E1028Rfs*29|1|0.41|ENSG00000038382|chr5:14369389-14369389|G/-|frameshift_variant;TRIO|p.K1219Nfs*43|2|0.16|ENSG00000038382|chr5:14387518-14387518|A/-|frameshift_variant;TRIO|p.V2351Cfs*62|3|0.3|ENSG00000038382|chr5:14487672-14487672|C/-|frameshift_variant	78.26377905018397	0.10505600812668463	4				NaN	NaN	0	NaN	2633	2488	5118
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5124	17.322	NaN	17711	30	0	3114.4	0.036	+			14549	GTFDNAETKK	10	73	555.7758246248958	NaN	0	555.775146484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTFDNAETKK_	DYNC1H1|p.F2635Lfs*67|1|0.16|ENSG00000197102|chr14:102017141-102017141|T/-|frameshift_variant;DYNC1H1|p.G1902Vfs*27|2|0.27|ENSG00000197102|chr14:102006154-102006154|G/-|frameshift_variant;DYNC1H1|p.K3112Hfs*3|1|0.31|ENSG00000197102|chr14:102027998-102027999|-/TCACAAG|frameshift_variant;DYNC1H1|p.W4201Gfs*43|1|0.42|ENSG00000197102|chr14:102043958-102043958|G/-|frameshift_variant;ENSG00000197102|ENST00000360184|DYNC1H1	56.43379154798735	0.2634004003759929	4				NaN	NaN	0	NaN	2634	2488	5118
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5125	17.323	NaN	6711.8	30	0	1070.8	0.14	+			43774	TLIMGDFST	9	66	492.738375153876	983.462197374552	2	493.72760009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TLIMGDFST_	L1PA3_dup1321|chr2:173527290-173533317:-|1.892281258594111|0.2637255971055219|2.84|482.0|152|3|sense	24.20275056022122	0.577060078256802	4				NaN	NaN	0	NaN	2635	2488	5118
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5143	17.36	NaN	75012	30	0	17453	0.214				-1	 	0	83	478.26128904088665	954.5080251485733	2	478.26116943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2650	2491	5142
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5144	17.364	NaN	70491	30	0	12339	0.106			+	5118	ATSSALLRGA	10	105	473.76942511461783	945.5242972960357	2	473.76934814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATSSALLRGA_	REV__ENSG00000088827|ENST00000344754|SIGLEC1;REV__nc|ENSG00000088827|Q9BZZ2-2|SIGLEC1;REV__nc|ENSG00000088827|Q9BZZ2-3|SIGLEC1	69.6276240434122	0.2803623802747859	4				NaN	NaN	0	NaN	2651	2491	5142
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5145	17.366	NaN	25079	30	0	4018.1	0.106			+	3997	ATCCRPCRQ	9	54	519.2247502287146	1036.434947524229	2	519.2244262695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATCCRPCRQ_	REV__ENST00000530275.2_1_1:39878414-39878576:+|nuORF	40.77816245573522	0.41113185337114944	4				NaN	NaN	0	NaN	2652	2491	5142
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5146	17.368	NaN	21124	30	0	5406.2	0.106	+			9244	EGVERIMF	8	81	498.74377830276677	995.4730036723336	2	498.7434387207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_EGVERIM(Oxidation (M))F_	tr|U7SGA9|U7SGA9_FUSNUPhosphoheptoseisomeraseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=gmhAPE=3SV=1	65.80317337860623	0.44433089765398776	4				NaN	NaN	0	NaN	2653	2491	5142
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5147	17.37	NaN	11362	30	0	5740.1	0.106			+	-1	KDSMFIVE	8	61	492.738375153876	983.462197374552	2	492.7378234863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_KDSM(Oxidation (M))FIVE_	REV__ENSG00000129187|ENST00000438320|DCTD;REV__nc|ENSG00000129187|P32321-2|DCTD	29.14955571784316	0.7342621283720113	4				NaN	NaN	0	NaN	2654	2491	5142
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5148	17.371	NaN	20531	30	0	9341.8	0.106			+	10025	ERTVDSLR	8	80	488.26425995749037	974.5139669817808	2	488.26409912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ERTVDSLR_	REV__ENSG00000184863|ENST00000401878|RBM33;REV__nc|ENSG00000184863|Q96EV2-2|RBM33;REV__RBM33|p.G1030Afs*52|1|0.29|ENSG00000184863|chr7:155763915-155763915|G/-|frameshift_variant;REV__RBM33|p.L1031Pfs*109|1|0.35|ENSG00000184863|chr7:155763914-155763915|-/G|frameshift_variant;REV__RBM33|p.P374Rfs*4|1|0.3|ENSG00000184863|chr7:155711372-155711372|C/-|frameshift_variant;REV__RBM33|p.P840Qfs*31|1|0.17|ENSG00000184863|chr7:155745138-155745138|C/-|frameshift_variant;REV__RBM33|p.T776Qfs*17|1|0.24|ENSG00000184863|chr7:155742091-155742091|A/-|frameshift_variant	76.7741389293348	0.3504530765139327	4				NaN	NaN	0	NaN	2655	2491	5142
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5149	17.373	NaN	21636	30	0	2420.8	0.037	+			35011	SACHKYFEK	9	86	585.2743082299286	1168.534063526657	2	585.2743530273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_SAC(Carbamidomethyl (C))HKYFEK_	ENSG00000163993|ENST00000296370|S100P;ENST00000513778.1_1_4:6695618-6698766:+|nuORF;S100P|p.T82M|1|0.3|ENSG00000163993|chr4:6696999-6696999|C/T|missense_variant	104.01359247289065	0.03510646158778409	4				NaN	NaN	0	NaN	2656	2491	5142
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5160	17.398	NaN	13109	30	0	4285.8	0.214	+			9759	ENILTGAKK	9	70	487.2877742859835	972.560995638767	2	487.28729248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ENILTGAKK_	ENSG00000097021|ENST00000361521|ACOT7;nc|ENSG00000097021|O00154-2|ACOT7;nc|ENSG00000097021|O00154-3|ACOT7;nc|ENSG00000097021|O00154-4|ACOT7;nc|ENSG00000097021|O00154-5|ACOT7;nc|ENSG00000097021|O00154-6|ACOT7;nc|ENSG00000097021|O00154|ACOT7	66.42927471994793	0.16001998865088202	4				NaN	NaN	0	NaN	2664	2494	5159
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5161	17.402	NaN	11168	30	0	1932.4	0.106	+			41650	SVQTQPAIKK	10	76	550.327611234571	1098.640669535942	2	550.3275756835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVQTQPAIKK_	BARD1|p.D172Mfs*40|2|0.14|ENSG00000138376|chr2:214781361-214781361|T/-|frameshift_variant;BARD1|p.K208Rfs*4|3|0.24|ENSG00000138376|chr2:214781251-214781251|T/-|frameshift_variant;BARD1|p.N306Ifs*11|1|0.11|ENSG00000138376|chr2:214780957-214780957|T/-|frameshift_variant;ENSG00000138376|ENST00000260947|BARD1;nc|ENSG00000138376|Q99728-2|BARD1;nc|ENSG00000138376|Q99728-3|BARD1	65.46538089061403	0.31613324008013116	4				NaN	NaN	0	NaN	2665	2494	5159
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5162	17.404	NaN	6173.9	30	0	1178.2	0.106	+			49964	WADHEDYM	8	51	533.701190401982	1065.3878278707639	2	533.701416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_WADHEDYM_	ENSG00000139174|ENST00000345127|PRICKLE1	26.79610172149135	0.7524337208463756	4				NaN	NaN	0	NaN	2666	2494	5159
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5163	17.406	NaN	4542	30	0	707.68	0.106				-1	 	0	53	465.727930627962	929.441308322724	2	466.2821044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2667	2494	5159
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5164	17.407	NaN	1175.2	30	0	377.88	0.106			+	-1	CGLTAGVM	8	31	384.1744961802572	766.3344394273145	2	384.174560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_CGLTAGVM(Oxidation (M))_	REV__ENST00000216099.12_2_22:39418870-39418927:+|nuORF	13.775330524044264	0.789990904165365	4				NaN	NaN	0	NaN	2668	2494	5159
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5165	17.409	NaN	8667.6	30	0	1890.4	0.106	+			35599	SCANDGHCHPA	11	49	556.2074403623482	1110.4003277914962	2	556.2069702148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SCANDGHCHPA_	ENSG00000162591|ENST00000356575|MEGF6;MEGF6|p.A1440Gfs*4|1|0.29|ENSG00000162591|chr1:3493839-3493840|-/C|frameshift_variant;MEGF6|p.A1440Hfs*78|2|0.41|ENSG00000162591|chr1:3493840-3493840|C/-|frameshift_variant;MEGF6|p.R1079Gfs*195|1|0.36|ENSG00000162591|chr1:3498488-3498488|G/-|frameshift_variant;nc|ENSG00000162591|O75095-2|MEGF6	16.71738777980365	0.7922119881075679	4				NaN	NaN	0	NaN	2669	2494	5159
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5166	17.411	NaN	6547	30	0	990.74	0.036			+	49400	VVTEVGMLKP	10	60	536.8092041015625	NaN	0	536.8092041015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VVTEVGMLKP_	REV__ENSG00000143507|ENST00000366899|DUSP10;REV__ENST00000468085.5_1_1:221875756-221910233:-|nuORF;REV__nc|ENSG00000143507|Q9Y6W6-2|DUSP10	25.57405402267927	0.4162033004763879	4				NaN	NaN	0	NaN	2670	2494	5159
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5181	17.442	NaN	28484	30	0	2883.1	0.214	+			3645	ASYENVRAK	9	99	519.2730712631706	1036.531589593141	2	519.27294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASYENVRAK_	ENSG00000128340|ENST00000249071|RAC2	112.2953585152457	0.026655838328212944	4				NaN	NaN	0	NaN	2682	2497	5180
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5182	17.446	NaN	20787	30	0	2127.9	0.106	+			5948	AVLKHIENK	9	85	526.3170611266456	1050.6195693200912	2	526.317138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVLKHIENK_	ENSG00000160695|ENST00000621676|VPS11;nc|ENSG00000160695|Q9H270|VPS11	177.3047273071476	0.0015666121956477066	4				NaN	NaN	0	NaN	2683	2497	5180
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5183	17.448	NaN	13426	30	0	2413.8	0.106			+	-1	CAGFIMCV	8	74	458.68979065195987	915.3650283707198	2	458.6896667480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_CAGFIM(Oxidation (M))C(Carbamidomethyl (C))V_	REV__ENST00000279839.7_1_11:94705320-94706729:-|nuORF	33.49298260027079	0.7007254697536482	4				NaN	NaN	0	NaN	2684	2497	5180
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5184	17.45	NaN	11044	30	0	1433.1	0.106	+			40774	SVDLPKHAK	9	76	497.78795205525444	993.5613511773089	2	497.787841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVDLPKHAK_	ENSG00000095203|ENST00000374566|EPB41L4B;nc|ENSG00000095203|Q9H329-2|EPB41L4B	101.60071028292904	0.0375685401170269	4				NaN	NaN	0	NaN	2685	2497	5180
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5185	17.452	NaN	12642	30	0	2284.1	0.106	+			12285	GAYDGKYEK	9	74	515.7460068985956	1029.4774608639912	2	515.7460327148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GAYDGKYEK_	ENSG00000196981|ENST00000330689|WDR5B;WDR5B|p.P136Efs*12|1|0.03|ENSG00000196981|chr3:122415124-122415125|-/CTCT|frameshift_variant	98.58198989935565	0.04066992115528678	4				NaN	NaN	0	NaN	2686	2497	5180
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5186	17.453	NaN	9221.5	30	0	8054.2	0.034				-1	MVAEESGPG	9	31	467.69513263520275	933.3757123372055	2	467.6947937011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))M(Oxidation (M))VAEESGPG_	ENSG00000138081|ENST00000403359|FBXO11;FBXO11|p.A83V|1|0.44|ENSG00000138081|chr2:47839754-47839754|G/A|missense_variant;FBXO11|p.D318Kfs*3|1|0.37|ENSG00000138081|chr2:47833050-47833053|TGTC/-|frameshift_variant;FBXO11|p.F332Lfs*13|1|0.41|ENSG00000138081|chr2:47833009-47833009|A/-|frameshift_variant;nc|ENSG00000138081|Q86XK2-3|FBXO11;nc|ENSG00000138081|Q86XK2-4|FBXO11;nc|ENSG00000138081|Q86XK2-5|FBXO11;nc|ENSG00000138081|Q86XK2-6|FBXO11	12.206847966760668	0.6112419832031292	4				NaN	NaN	0	NaN	2687	2497	5180
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5187	17.454	NaN	9350.6	30	0	800.42	0.149				-1	FVCWWRYWWH	10	94	813.3682861328125	NaN	0	813.3682861328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_FVC(Carbamidomethyl (C))WWRYWWH_	ENST00000410111.7_1_2:86406577-86422494:-|nuORF	17.364965105453717	0.4201028297492154	4				NaN	NaN	0	NaN	2688	2497	5180
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5205	17.493	NaN	15190	30	0	1398.4	0.214	+			2850	ASALGSSSYKK	11	88	549.7936165743655	1097.572680215531	2	549.7935791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASALGSSSYKK_	ENSG00000122965|ENST00000261741|RBM19;RBM19|p.F841Sfs*18|1|0.28|ENSG00000122965|chr12:113915007-113915007|G/-|frameshift_variant	58.2462437865262	0.33910980880557884	4				NaN	NaN	0	NaN	2703	2500	5204
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5206	17.497	NaN	13731	30	0	2262.9	0.106	+			49145	VVMADPKGK	9	73	472.76553668850505	943.5165204438101	2	472.7651672363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVMADPKGK_	ENSG00000137038|ENST00000358227|DMAC1;ENST00000469050.1_1_9:7798575-7833931:-|nuORF;ENST00000484082.1_1_9:7798575-7800059:-|nuORF;nc|ENSG00000137038|Q96GE9|DMAC1	87.69643885390035	0.07135982304947239	4				NaN	NaN	0	NaN	2704	2500	5204
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5207	17.499	NaN	1940.1	30	0	508.42	0.106			+	-1	GAAARCDGPR	10	48	344.16604525984246	1029.4763063797275	3	344.1662292480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_GAAARC(Carbamidomethyl (C))DGPR_	REV__ENST00000536459.6_1_19:58978634-58978952:+|nuORF	23.52269567125451	0.6877354443478558	4				NaN	NaN	0	NaN	2705	2500	5204
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5208	17.501	NaN	5969.2	30	0	1129.6	0.106	+			34019	RSKTSGCGRR	10	49	554.2925962741328	1106.5706396150656	2	554.230224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RSKTSGCGRR_	ENST00000601135.5_1_19:42713857-42721849:-|nuORF	18.262085536374414	0.7236521404371882	4				NaN	NaN	0	NaN	2706	2500	5204
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5209	17.503	NaN	3049.2	30	0	792.27	0.106				-1	LCAIFFLFL	9	46	381.8804282940657	1142.6194554823971	3	381.88043212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_LC(Carbamidomethyl (C))AIFFLFL_	ENSG00000212126|ENST00000506868|TAS2R50	21.9598887501803	0.5980208138527809	4				NaN	NaN	0	NaN	2707	2500	5204
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5210	17.505	NaN	7389.7	30	0	856.66	0.034	+			15536	GVDGSVYKK	9	63	476.7588878793913	951.5032228255826	2	476.75836181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GVDGSVYKK_	ENSG00000159399|ENST00000290573|HK2;ENST00000447818.2_1_X:79828255-79829731:-|nuORF	82.7504851949679	0.08565546331141553	4				NaN	NaN	0	NaN	2708	2500	5204
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5211	17.505	NaN	2135.6	30	0	346.81	0.137	+			12202	GAPTPRPL	8	52	404.7373973541685	807.460241775137	2	404.7376708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GAPTPRPL_	ENSG00000132510|ENST00000448097|KDM6B;KDM6B|p.K1101Rfs*3|1|0.23|ENSG00000132510|chr17:7849583-7849583|C/-|frameshift_variant;KDM6B|p.P544Sfs*11|1|0.14|ENSG00000132510|chr17:7847912-7847913|-/C|frameshift_variant;KDM6B|p.P842Hfs*52|1|0.38|ENSG00000132510|chr17:7848808-7848808|C/-|frameshift_variant;KDM6B|p.R513Afs*69|1|0.84|ENSG00000132510|chr17:7847819-7847819|C/-|frameshift_variant;KDM6B|p.T676Hfs*8|1|0.18|ENSG00000132510|chr17:7848307-7848308|-/C|frameshift_variant;KDM6B|p.T743Pfs*39|1|0.55|ENSG00000132510|chr17:7848510-7848510|C/-|frameshift_variant;nc|ENSG00000132510|O15054-1|KDM6B	54.76467175910256	0.5536104764165384	4				NaN	NaN	0	NaN	2709	2500	5204
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5229	17.544	NaN	11488	30	0	2117.1	0.214	+			14461	GTCASWRGK	9	77	511.7455551561761	1021.4765573791523	2	511.74554443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GTC(Carbamidomethyl (C))ASWRGK_	ENSG00000265972|ENST00000582401|TXNIP;ENST00000488537.1_1_1:145440216-145440639:+|nuORF;nc|ENSG00000265972|Q9H3M7-2|TXNIP	109.47833844074708	0.029530294723441826	4				NaN	NaN	0	NaN	2724	2503	5228
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5230	17.547	NaN	28510	30	0	2983.8	0.106	+			4260	ATGESIAVKK	10	95	502.29292040442067	1002.5712878756414	2	502.2928161621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATGESIAVKK_	DCLRE1C|p.R685Efs*6|1|0.37|ENSG00000152457|chr10:14908434-14908434|T/-|frameshift_variant;ENSG00000152457|ENST00000378278|DCLRE1C;nc|ENSG00000152457|Q96SD1-2|DCLRE1C;nc|ENSG00000152457|Q96SD1-3|DCLRE1C	185.32735939749918	0.0007028557303517356	4				NaN	NaN	0	NaN	2725	2503	5228
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5231	17.549	NaN	14537	30	0	6710.2	0.106			+	26555	LTSKLHPNP	9	66	336.1940332919502	1005.5602704760506	3	336.1941223144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LTSKLHPNP_	REV__ENSG00000135447|ENST00000257905|PPP1R1A	38.80614096846853	0.43426287593479557	4				NaN	NaN	0	NaN	2726	2503	5228
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5232	17.551	NaN	8638.8	30	0	2564.7	0.106				-1	YCDMTESNP	9	71	538.1879111601438	NaN	0	538.298583984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_YCDM(Oxidation (M))TESNP_	ENSG00000124812|ENST00000335847|CRISP1;nc|ENSG00000124812|P54107-2|CRISP1	32.81241826257853	0.3119040447479903	4				NaN	NaN	0	NaN	2727	2503	5228
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5233	17.553	NaN	2419.6	30	0	504.23	0.106			+	23765	LCGSIVWW	8	52	482.241200257155	962.46784758111	2	482.2408447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LCGSIVWW_	REV__SLC14A2|p.A615V|1|0.33|ENSG00000132874|chr18:45667959-45667959|C/T|missense_variant	26.79610172149135	0.7524337208463756	4				NaN	NaN	0	NaN	2728	2503	5228
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5234	17.555	NaN	15618	30	0	5204.4	0.037	+			33115	REMVPARIR	9	62	564.327308803923	1126.6400646746458	2	564.3272705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_REMVPARIR_	ENST00000380334.6_1_X:15706900-15721312:+|nuORF;nc|ENSG00000290746|Q8WTZ4|CA5BP1	47.657333605630114	0.33044192980041115	4				NaN	NaN	0	NaN	2729	2503	5228
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5235	17.555	NaN	3565	30	0	750.5	0.14			+	-1	DDLTLMYT	8	60	494.22038385938964	986.4262147855793	2	494.2200622558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_DDLTLM(Oxidation (M))YT_	REV__PDE4A|p.E423D|1|0.34|ENSG00000065989|chr19:10459663-10459663|G/T|missense_variant	19.359975847455235	0.7988239741663654	4				NaN	NaN	0	NaN	2730	2503	5228
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5253	17.594	NaN	6579.7	30	0	922.19	0.214			+	13534	GLRSPPPAPP	10	82	330.19061578974436	987.5500179694332	3	330.1907653808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GLRSPPPAPP_	REV__ENST00000216373.9_1_14:50671095-50698242:-|nuORF	54.722347961057174	0.4138398245444204	4				NaN	NaN	0	NaN	2745	2506	5252
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5254	17.597	NaN	5987.6	30	0	798.44	0.106	+			3247	ASLGASVHK	9	64	435.2452130040771	868.4758730749542	2	435.24554443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASLGASVHK_	ENSG00000239900|ENST00000623063|ADSL;nc|ENSG00000239900|P30566-2|ADSL	98.62937762414208	0.04060045538121712	4				NaN	NaN	0	NaN	2746	2506	5252
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5255	17.6	NaN	4818	30	0	774.01	0.106			+	43882	TMSALSPYGAG	11	62	527.7489332267388	NaN	0	527.7714233398438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TMSALSPYGAG_	REV__ENSG00000266826|ENST00000583666|IGBP1C	31.529811441608018	0.4249010005043958	4				NaN	NaN	0	NaN	2747	2506	5252
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5256	17.601	NaN	14442	30	0	2888.2	0.106			+	21860	KRLDEVSKQH	10	81	620.3438501341508	1238.6731473351015	2	620.3441772460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KRLDEVSKQH_	REV__tr|U7SP75|U7SP75_FUSNURadicalSAMcoredomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01755PE=4SV=1	31.529811441608018	0.6223461015008678	4				NaN	NaN	0	NaN	2748	2506	5252
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5257	17.603	NaN	5571.9	30	0	749.44	0.106	+			38144	SQAEIYHNR	9	67	559.2735595703125	NaN	0	559.2735595703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SQAEIYHNR_	ENSG00000113845|ENST00000494664|TIMMDC1	59.93077597824379	0.14961415694175798	4				NaN	NaN	0	NaN	2749	2506	5252
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5258	17.605	NaN	5769.6	30	0	757.69	0.035	+			47922	VSLSKVEPR	9	64	507.80090190321613	1013.5872508732323	2	507.80108642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VSLSKVEPR_	ENSG00000080200|ENST00000389622|CRYBG3	67.49366992349736	0.1516260258713357	4				NaN	NaN	0	NaN	2750	2506	5252
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5259	17.606	NaN	7232.9	30	0	1272.6	0.143	+			11382	FLLLFRREN	9	66	604.3493041992188	NaN	0	604.3493041992188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FLLLFRREN_	ENSG00000079689|ENST00000377961|SCGN	53.08895987439943	0.18540527177656715	4				NaN	NaN	0	NaN	2751	2506	5252
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5277	17.644	NaN	4832.6	30	0	998.5	0.214			+	33549	RLEVGGRSTA	10	66	523.2913818359375	NaN	0	523.2913818359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RLEVGGRSTA_	REV__ENST00000393158.6_1_11:103780486-103797644:-|nuORF	37.81151784470057	0.3760215235790741	4				NaN	NaN	0	NaN	2766	2509	5276
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5278	17.648	NaN	11386	30	0	1748.3	0.106	+			4742	ATMPKKGILKK	11	72	607.8863627317829	1213.7581725303658	2	607.88671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATMPKKGILKK_	ENSG00000074590|ENST00000261402|NUAK1;NUAK1|p.P507Rfs*6|1|0.5|ENSG00000074590|chr12:106067268-106067268|G/-|frameshift_variant	51.72707519102574	0.3974808554116684	4				NaN	NaN	0	NaN	2767	2509	5276
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5279	17.65	NaN	7625.9	30	0	1423.3	0.106	+			17187	HTSEVVAIKK	10	64	556.3275756835938	NaN	0	556.3275756835938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HTSEVVAIKK_	ENSG00000135090|ENST00000392533|TAOK3;TAOK3|p.I311Nfs*13|2|0.27|ENSG00000135090|chr12:118201351-118201352|-/T|frameshift_variant	49.536043120802724	0.30853568297719935	4				NaN	NaN	0	NaN	2768	2509	5276
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5280	17.652	NaN	1972.4	30	0	468.22	0.106			+	7064	CTVCSLGV	8	43	391.18204126550984	780.3495295978197	2	391.1822814941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_CTVCSLGV_	REV__CIITA|p.R884C|1|0.29|ENSG00000179583|chr16:10908142-10908142|C/T|missense_variant	28.2542754592877	0.7411748056684583	4				NaN	NaN	0	NaN	2769	2509	5276
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5281	17.653	NaN	3204.5	30	0	471.58	0.106			+	30971	QEQQVTIQ	8	64	487.2498950894763	NaN	0	487.2510070800781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QEQQVTIQ_	REV__ENSG00000055609|ENST00000262189|KMT2C;REV__ENST00000470054.5_2_21:11038782-11047532:-|nuORF;REV__ENST00000496773.1_1_21:11038782-11047532:-|nuORF;REV__KMT2C|p.F4496Lfs*21|3|0.28|ENSG00000055609|chr7:152148439-152148439|A/-|frameshift_variant;REV__KMT2C|p.I4868Lfs*37|1|0.28|ENSG00000055609|chr7:152138837-152138837|T/-|frameshift_variant;REV__KMT2C|p.K1164Rfs*17|1|0.4|ENSG00000055609|chr7:152222008-152222009|TT/-|frameshift_variant;REV__KMT2C|p.K1247Nfs*56|1|0.22|ENSG00000055609|chr7:152207400-152207400|T/-|frameshift_variant;REV__KMT2C|p.K2867Dfs*7|1|0.28|ENSG00000055609|chr7:152176853-152176854|TT/-|frameshift_variant;REV__KMT2C|p.P2292Hfs*13|1|0.25|ENSG00000055609|chr7:152180985-152180985|G/-|frameshift_variant;REV__KMT2C|p.S2816Ifs*6|1|0.44|ENSG00000055609|chr7:152177007-152177008|-/T|frameshift_variant;REV__KMT2C|p.T3715Qfs*4|1|0.34|ENSG00000055609|chr7:152162434-152162434|T/-|frameshift_variant;REV__nc|ENSG00000055609|Q8NEZ4-2|KMT2C;REV__nc|ENSG00000055609|Q8NEZ4-3|KMT2C	42.86426827375447	1.7418937515398478	4				NaN	NaN	0	NaN	2770	2509	5276
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5282	17.655	NaN	4967.9	30	0	532.43	0.038	+			43123	TERIEKERM	9	63	397.87636277801744	1190.6072589342523	3	398.2109680175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TERIEKERM_	ENSG00000080503|ENST00000349721|SMARCA2;nc|ENSG00000080503|P51531-2|SMARCA2	54.722347961057174	0.257609425301511	4				NaN	NaN	0	NaN	2771	2509	5276
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5283	17.656	NaN	6274.3	30	0	1073.9	0.141			+	-1	EFLFSKMI	8	63	515.7673381636396	1029.520123394079	2	515.7670288085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_EFLFSKM(Oxidation (M))I_	REV__ENSG00000100796|ENST00000554943|PPP4R3A;REV__nc|ENSG00000100796|Q6IN85-2|PPP4R3A;REV__nc|ENSG00000100796|Q6IN85-4|PPP4R3A	30.503639358989545	0.7238069182250283	4				NaN	NaN	0	NaN	2772	2509	5276
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5301	17.694	NaN	12677	30	0	1598.8	0.214	+			42792	TEAKIKQKL	9	71	529.8322990092455	1057.650045085291	2	529.8324584960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEAKIKQKL_	ENSG00000072501|ENST00000322213|SMC1A;SMC1A|p.R426W|1|0.44|ENSG00000072501|chrX:53409482-53409482|G/A|missense_variant	106.68306549817024	0.032382560583716295	4				NaN	NaN	0	NaN	2787	2512	5300
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5302	17.698	NaN	13415	30	0	4046.1	0.106	+			21165	KKVPDVKE	8	71	471.78509372149415	941.5556345097883	2	471.7845764160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KKVPDVKE_	ENSG00000102387|ENST00000356784|TAF7L;nc|ENSG00000102387|Q5H9L4-3|TAF7L;nc|ENSG00000102387|Q5H9L4|TAF7L	55.50420428727701	0.5462892107279674	4				NaN	NaN	0	NaN	2788	2512	5300
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5303	17.7	NaN	3931.7	30	0	884.02	0.106			+	42299	TAETTGFHE	9	47	496.7184620245491	NaN	0	496.71856689453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TAETTGFHE_	REV__ENSG00000158623|ENST00000425248|COPG2;REV__nc|ENSG00000158623|Q9UBF2-2|COPG2	27.882242232435846	0.3367954786602879	4				NaN	NaN	0	NaN	2789	2512	5300
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5304	17.702	NaN	6614.4	30	0	1263.2	0.106	+			45113	TVISHNPETK	10	62	563.2987159842055	1124.582879035211	2	563.2988891601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TVISHNPETK_	ENSG00000161016|ENST00000528957|RPL8;ENST00000430538.1_1_21:31635868-31636186:-|nuORF;ENST00000525232.5_1_8:146016635-146016902:-|nuORF	70.39856735676683	0.27406383984062843	4				NaN	NaN	0	NaN	2790	2512	5300
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5305	17.704	NaN	1728.9	30	0	160.62	0.106			+	-1	ANIADRAMEE	10	45	379.17156982421875	NaN	0	379.17156982421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_ANIADRAM(Oxidation (M))EE_	REV__tr|U7T415|U7T415_FUSNUDipeptideepimeraseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00217PE=3SV=1	20.030474535948922	0.4201028297492154	4				NaN	NaN	0	NaN	2791	2512	5300
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5306	17.705	NaN	1396.7	30	0	258.6	0.032				-1	 	0	45	400.71332032041863	799.4120877076373	2	401.17724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2792	2512	5300
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5307	17.706	NaN	11574	30	0	1672.7	0.145			+	-1	MSLRHHCQVPP	11	70	689.327392578125	NaN	0	689.327392578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))SLRHHC(Carbamidomethyl (C))QVPP_	REV__BIRC6|p.K3585Sfs*8|1|0.32|ENSG00000115760|chr2:32515171-32515171|A/-|frameshift_variant;REV__ENSG00000115760|ENST00000421745|BIRC6	30.317721548370564	0.4303027717346894	4				NaN	NaN	0	NaN	2793	2512	5300
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5325	17.745	NaN	10626	30	0	2311.9	0.214	+			3704	ATAALLRHK	9	69	490.8036751455993	979.5927973579986	2	490.8033447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATAALLRHK_	ENSG00000170915|ENST00000442253|PAQR8	107.00750918261382	0.032051501805654005	4				NaN	NaN	0	NaN	2808	2515	5324
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5326	17.748	NaN	40101	30	0	10893	0.106	+			32120	QSKMRANNQK	10	87	602.8147899816578	1203.6150270301155	2	602.8150634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QSKMRANNQK_	ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1;SPTBN1|p.K503Rfs*24|1|0.06|ENSG00000115306|chr2:54626095-54626095|G/-|frameshift_variant	76.16968421966216	0.22691431239609447	4				NaN	NaN	0	NaN	2809	2515	5324
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5327	17.751	NaN	23465	30	0	5334.8	0.106	+			40918	SVFQQGMKNK	10	90	591.8006195382261	1181.586686143252	2	591.8006591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_SVFQQGM(Oxidation (M))KNK_	ENSG00000018625|ENST00000361216|ATP1A2;ENSG00000105409|ENST00000648268|ATP1A3;ENSG00000163399|ENST00000295598|ATP1A1;ENST00000479960.1_1_1:116943772-116944278:+|nuORF;nc|ENSG00000105409|P13637-2|ATP1A3;nc|ENSG00000105409|P13637-3|ATP1A3;nc|ENSG00000163399|P05023-3|ATP1A1;nc|ENSG00000163399|P05023-4|ATP1A1	90.60085204095205	0.12763388345653318	4				NaN	NaN	0	NaN	2810	2515	5324
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5328	17.752	NaN	7730.4	30	0	1486	0.106	+			40114	STPHTSTSV	9	70	458.7224230206577	915.4302931081154	2	458.7220153808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STPHTSTSV_	ENSG00000169876|ENST00000306151|MUC17;MUC17|p.N4205Tfs*18|1|0.07|ENSG00000169876|chr7:101048918-101048918|A/-|frameshift_variant;nc|ENSG00000169876|Q685J3-2|MUC17	68.78682469695295	0.14603441672067394	4				NaN	NaN	0	NaN	2811	2515	5324
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5329	17.754	NaN	6153.2	30	0	2024	0.106				-1	 	0	66	501.35373353978395	500.34645707318396	1	501.7881164550781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2812	2515	5324
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5330	17.756	NaN	3098.9	30	0	407.14	0.035			+	18770	ITPVLTFLK	9	52	516.3269653320312	NaN	0	516.3269653320312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ITPVLTFLK_	REV__tr|U7T0G4|U7T0G4_FUSNUGlycine--tRNAligasebetasubunitOS=FusobacteriumnucleatumCTI-5OX=1316586GN=glySPE=3SV=1	26.69291269510374	0.34280015626154364	4				NaN	NaN	0	NaN	2813	2515	5324
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5331	17.757	NaN	3618	30	0	641.19	0.141			+	31563	QLNRPGSKPA	10	63	534.3013801626117	NaN	0	534.3014526367188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QLNRPGSKPA_	REV__COL12A1|p.F2273Lfs*20|1|0.26|ENSG00000111799|chr6:75124000-75124000|A/-|frameshift_variant;REV__COL12A1|p.G2777Wfs*37|1|0.15|ENSG00000111799|chr6:75102684-75102685|-/G|frameshift_variant;REV__COL12A1|p.G3027Wfs*19|1|0.1|ENSG00000111799|chr6:75087680-75087681|-/G|frameshift_variant;REV__COL12A1|p.L2085Hfs*4|1|0.22|ENSG00000111799|chr6:75128382-75128383|-/T|frameshift_variant;REV__COL12A1|p.P2307Lfs*21|1|0.25|ENSG00000111799|chr6:75123356-75123356|G/-|frameshift_variant;REV__ENSG00000111799|ENST00000322507|COL12A1;REV__nc|ENSG00000111799|Q99715-2|COL12A1;REV__nc|ENSG00000111799|Q99715-4|COL12A1	37.81151784470057	0.3760215235790741	4				NaN	NaN	0	NaN	2814	2515	5324
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5349	17.796	NaN	21534	30	0	5729.3	0.214	+			15219	GTSSSAASSLK	11	74	498.2539901191081	994.4934273050162	2	498.25372314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTSSSAASSLK_	ARID1A|p.F2141Sfs*59|5|0.26|ENSG00000117713|chr1:26780313-26780313|C/-|frameshift_variant;ARID1A|p.K1161Sfs*19|1|0.29|ENSG00000117713|chr1:26772573-26772573|A/-|frameshift_variant;ARID1A|p.M1564Hfs*8|1|0.18|ENSG00000117713|chr1:26774910-26774911|-/C|frameshift_variant;ARID1A|p.N1475Tfs*6|1|0.36|ENSG00000117713|chr1:26774648-26774648|A/-|frameshift_variant;ARID1A|p.P1115Qfs*46|1|0.32|ENSG00000117713|chr1:26771260-26771260|C/-|frameshift_variant;ARID1A|p.P1326Rfs*155|1|0.15|ENSG00000117713|chr1:26773685-26773685|C/-|frameshift_variant;ARID1A|p.P1406Rfs*37|1|0.42|ENSG00000117713|chr1:26774444-26774448|CCCCA/-|frameshift_variant;ARID1A|p.P1568Lfs*44|1|0.14|ENSG00000117713|chr1:26774926-26774926|C/-|frameshift_variant;ARID1A|p.P1575Hfs*37|1|0.38|ENSG00000117713|chr1:26774947-26774947|C/-|frameshift_variant;ARID1A|p.P2114Rfs*21|1|0.46|ENSG00000117713|chr1:26780236-26780236|C/-|frameshift_variant;ARID1A|p.V2244Gfs*34|1|0.31|ENSG00000117713|chr1:26780626-26780627|-/G|frameshift_variant;ENSG00000049618|ENST00000636930|ARID1B;ENSG00000117713|ENST00000324856|ARID1A;nc|ENSG00000049618|Q8NFD5-1|ARID1B;nc|ENSG00000049618|Q8NFD5-2|ARID1B;nc|ENSG00000049618|Q8NFD5|ARID1B;nc|ENSG00000117713|O14497-2|ARID1A;nc|ENSG00000117713|O14497-3|ARID1A	107.45493779368988	0.045275086874925735	4				NaN	NaN	0	NaN	2829	2518	5348
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5350	17.799	NaN	5132	30	0	471.81	0.106	+			13735	GQAVALRAK	9	58	457.2826675132799	912.5507820933598	2	457.2823486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GQAVALRAK_	ENSG00000159692|ENST00000382952|CTBP1;ENST00000511907.1_1_4:1208072-1210006:-|nuORF;nc|ENSG00000159692|Q13363|CTBP1	148.04295825190792	0.0073252839830139265	4				NaN	NaN	0	NaN	2830	2518	5348
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5351	17.801	NaN	14044	30	0	4423	0.106	+			42015	SVYSGIRHK	9	77	523.7907965451262	1045.5670401570524	2	523.7911987304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVYSGIRHK_	ENSG00000068383|ENST00000368594|INPP5A;ENST00000487614.1_1_10:134511381-134540457:+|nuORF;ENST00000498337.1_1_10:134523853-134567324:+|nuORF;INPP5A|p.P199H|1|0.09|ENSG00000068383|chr10:132710405-132710405|C/A|missense_variant;JAG1-INPP5A|1|fusion	85.16082228582465	0.07850854922700509	4				NaN	NaN	0	NaN	2831	2518	5348
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5352	17.803	NaN	12303	30	0	1839.1	0.106				-1	MCCYLPLRAC	10	61	651.7758630262065	1301.5371731192129	2	651.775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))CC(Carbamidomethyl (C))YLPLRAC(Carbamidomethyl (C))_	ENSG00000198369|ENST00000356388|SPRED2;nc|ENSG00000198369|Q7Z698-2|SPRED2	23.04248740728303	0.69165701907106	4				NaN	NaN	0	NaN	2832	2518	5348
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5353	17.805	NaN	12193	30	0	1464.7	0.106	+			23763	LCGNERSKHQ	10	66	614.7939218508374	1227.5732907684746	2	614.7948608398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_LC(Carbamidomethyl (C))GNERSKHQ_	ENST00000444945.1_1_19:11777510-11777738:-|nuORF;ENST00000503999.2_1_15:66109611-66109743:-|nuORF	41.42661286455405	0.5359995577334734	4				NaN	NaN	0	NaN	2833	2518	5348
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5354	17.807	NaN	5699.6	30	0	759.6	0.037	+			44606	TTDRYIQQK	9	68	576.8046875	NaN	0	576.8046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TTDRYIQQK_	ENSG00000149480|ENST00000278823|MTA2;MTA2|p.A568Qfs*29|1|0.23|ENSG00000149480|chr11:62594402-62594402|T/-|frameshift_variant;MTA2|p.I556Hfs*8|1|0.29|ENSG00000149480|chr11:62594543-62594544|-/C|frameshift_variant;nc|ENSG00000149480|O94776-2|MTA2	36.31764250033197	0.294206896222586	4				NaN	NaN	0	NaN	2834	2518	5348
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5355	17.807	NaN	8245	30	0	867.9	0.14	+			40582	SVAELRSQK	9	66	509.28816962962657	1016.5617863260532	2	509.28814697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVAELRSQK_	ENSG00000131149|ENST00000253458|GSE1;nc|ENSG00000131149|Q14687-2|GSE1;nc|ENSG00000131149|Q14687-3|GSE1	159.33581866081465	0.004693099277440949	4				NaN	NaN	0	NaN	2835	2518	5348
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5373	17.847	NaN	12324	30	0	1733.4	0.214	+			23150	KVYDKAINR	9	74	553.8196724188828	1105.6247919045654	2	553.8197631835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVYDKAINR_	ENSG00000164190|ENST00000282516|NIPBL;ENST00000514335.1_1_5:37051847-37064632:+|nuORF;nc|ENSG00000164190|Q6KC79-2|NIPBL;NIPBL|p.I2776Lfs*3|1|0.17|ENSG00000164190|chr5:37064797-37064797|A/-|frameshift_variant	88.1336951990783	0.07012705547711102	4				NaN	NaN	0	NaN	2850	2521	5372
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5374	17.85	NaN	4374.3	30	0	693.78	0.106			+	47732	VSGFTLLVC	9	65	469.7532619297267	NaN	0	469.76153564453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSGFTLLVC_	REV__ENSG00000166598|ENST00000299767|HSP90B1;REV__ENST00000548462.5_1_12:104324233-104336580:+|nuORF;REV__ENST00000548622.1_1_12:104324188-104325414:+|nuORF	31.954861631926434	0.3162336699109506	4				NaN	NaN	0	NaN	2851	2521	5372
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5375	17.852	NaN	13742	30	0	6632.2	0.106			+	1559	AGGCRMRLF	9	63	542.2633439153639	1082.5121348975276	2	542.2635498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_AGGC(Carbamidomethyl (C))RM(Oxidation (M))RLF_	REV__ENST00000527372.6_2_17:27400982-27401243:-|nuORF	50.0245360154114	0.3026755932229825	4				NaN	NaN	0	NaN	2852	2521	5372
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5376	17.854	NaN	5472.9	30	0	953.05	0.106	+			20033	KEITEGKTV	9	66	502.7842608606066	1003.5539687880132	2	502.7843322753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEITEGKTV_	ENSG00000143179|ENST00000367879|UCK2	60.11826168202944	0.21262886028301267	4				NaN	NaN	0	NaN	2853	2521	5372
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5377	17.856	NaN	22760	30	0	3489.9	0.106				-1	MVLQKMAGT	9	72	332.1734343277966	993.4984735835899	3	332.1736145019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_MVLQKM(Oxidation (M))AGT_	ENST00000518319.5_1_8:94767110-94770759:+|nuORF	32.81241826257853	0.4965981579233955	4				NaN	NaN	0	NaN	2854	2521	5372
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5378	17.858	NaN	7202.4	30	0	1319.9	0.036			+	-1	QRLGLDCMP	9	78	545.2626893287262	NaN	0	545.2626342773438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_QRLGLDC(Carbamidomethyl (C))MP_	REV__ENST00000564621.1_1_15:74754385-74771599:+|nuORF	49.44154591367651	0.21054156626303966	4				NaN	NaN	0	NaN	2855	2521	5372
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5379	17.858	NaN	4892.4	30	0	871.6	0.14	+			15523	GVCTKITQK	9	58	517.7867902925425	1033.559027651885	2	517.7867431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_GVC(Carbamidomethyl (C))TKITQK_	ENSG00000178229|ENST00000321545|ZNF543	80.45461616416974	0.09558281504443908	4				NaN	NaN	0	NaN	2856	2521	5372
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5397	17.898	NaN	25645	30	0	3287.3	0.214	+			46679	VGGSTRIPK	9	79	457.77462963049516	913.5347063277903	2	457.7744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VGGSTRIPK_	ENSG00000044574|ENST00000324460|HSPA5;ENSG00000109971|ENST00000534624|HSPA8;ENSG00000126803|ENST00000247207|HSPA2;ENSG00000173110|ENST00000309758|HSPA6;ENSG00000204388|ENST00000375650|HSPA1B;ENSG00000204389|ENST00000375651|HSPA1A;ENSG00000204390|ENST00000375654|HSPA1L;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;HSPA5|p.N522Ifs*12|1|0.36|ENSG00000044574|chr9:125236992-125236992|T/-|frameshift_variant;HSPA6|p.D632Gfs*9|1|0.12|ENSG00000173110|chr1:161526547-161526548|-/G|frameshift_variant;HSPA8|p.K569Dfs*6|1|0.3|ENSG00000109971|chr11:123058302-123058303|TC/-|frameshift_variant;nc|ENSG00000109971|P11142-2|HSPA8;nc|ENSG00000204389|P0DMV8-2|HSPA1A	112.41091882917199	0.026537921851008135	4				NaN	NaN	0	NaN	2871	2524	5396
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5398	17.901	NaN	9580.2	30	0	2462.8	0.106	+			8679	EDWELMRP	8	66	538.2462826125865	1074.4780122919728	2	538.2464599609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EDWELMRP_	ENSG00000141040|ENST00000395825|ZNF287	45.9519527083369	0.6193794311207887	4				NaN	NaN	0	NaN	2872	2524	5396
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5399	17.903	NaN	28495	30	0	3376.1	0.106				-1	CWQRECHSQQ	10	84	709.7868880242776	1417.559223115355	2	709.785888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))WQREC(Carbamidomethyl (C))HSQQ_	ENST00000408965.3_1_8:48650755-48651031:-|nuORF	26.69291269510374	0.6618461711292317	4				NaN	NaN	0	NaN	2873	2524	5396
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5400	17.905	NaN	10990	30	0	4959.4	0.106			+	-1	LAMLLMLLG	9	69	336.1940332919502	1005.5602704760506	3	336.19415283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Oxidation (M)	_LAM(Oxidation (M))LLM(Oxidation (M))LLG_	REV__ACVRL1|p.A49Pfs*5|1|0.14|ENSG00000139567|chr12:51913177-51913177|G/-|frameshift_variant;REV__ENSG00000139567|ENST00000388922|ACVRL1	37.15910966729921	0.4535818937225704	4				NaN	NaN	0	NaN	2874	2524	5396
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5401	17.907	NaN	18526	30	0	3051.3	0.106				-1	YLFWYRQTMMR	11	82	805.8799762589482	NaN	0	805.8800659179688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_YLFWYRQTM(Oxidation (M))MR_	nc|ENSG00000276953|A0A0B4J2E0|TRBV12-4	18.262085536374414	0.456735970842152	4				NaN	NaN	0	NaN	2875	2524	5396
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5402	17.909	NaN	6997.8	30	0	1935.8	0.037	+			14106	GSLKPHDYPK	10	71	381.20470248532627	1140.5922780561789	3	381.2048034667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GSLKPHDYPK_	ENSG00000107537|ENST00000263038|PHYH;nc|ENSG00000107537|O14832-2|PHYH	104.42354056486148	0.06456012287859861	4				NaN	NaN	0	NaN	2876	2524	5396
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5403	17.909	NaN	8353.2	30	0	1861.4	0.143				-1	YSSSNDCPPE	10	40	599.2214309008363	1196.4283088684724	2	599.2223510742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))YSSSNDC(Carbamidomethyl (C))PPE_	ALPK1|p.D1036Tfs*3|1|0.09|ENSG00000073331|chr4:112435215-112435215|G/-|frameshift_variant;ALPK1|p.K1021Nfs*18|1|0.21|ENSG00000073331|chr4:112435170-112435170|A/-|frameshift_variant;ALPK1|p.L320M|1|0.29|ENSG00000073331|chr4:112430505-112430505|T/A|missense_variant;ENSG00000073331|ENST00000650871|ALPK1;ENST00000504745.1_1_4:113347516-113362363:+|nuORF;nc|ENSG00000073331|Q96QP1-2|ALPK1	9.182911543092327	0.7697862422657429	4				NaN	NaN	0	NaN	2877	2524	5396
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5422	17.949	NaN	183600	30	0	23988	0.139				-1	KCSSGKDLMK	10	105	577.2891361065986	1152.563719279997	2	577.2889404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_KC(Carbamidomethyl (C))SSGKDLMK_	ENST00000514799.1_1_5:59755891-59756539:-|nuORF	72.87924865735499	0.25379688738724415	4				NaN	NaN	0	NaN	2893	2527	5421
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5423	17.951	NaN	57904	30	0	31126	0.106			+	20344	KERSLLKR	8	85	515.3302537170333	1028.6459545008665	2	515.3300170898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KERSLLKR_	REV__ENSG00000182481|ENST00000330459|KPNA2;REV__KPNA2|p.P110S|1|0.22|ENSG00000182481|chr17:68042110-68042110|C/T|missense_variant	60.11826168202944	0.5006107059937851	4				NaN	NaN	0	NaN	2894	2527	5421
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5424	17.953	NaN	26897	30	0	4174.3	0.106	+			2567	AQATVHVVK	9	77	476.78245566313325	951.5503583930665	2	476.7820739746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AQATVHVVK_	ENST00000430374.5_1_2:217279626-217279842:+|nuORF	98.58198989935565	0.04066992115528678	4				NaN	NaN	0	NaN	2895	2527	5421
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5425	17.955	NaN	9496.9	30	0	1482.1	0.106			+	-1	SRMSFCSNL	9	61	551.7361454693921	1101.4577380055841	2	551.8148193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))SRM(Oxidation (M))SFCSNL_	REV__ENST00000490632.1_1_2:111406757-111408294:-|nuORF	34.172542307311794	0.4838870758800184	4				NaN	NaN	0	NaN	2896	2527	5421
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5426	17.957	NaN	9315.7	30	0	1700.4	0.106	+			46888	VIPQPKPFQ	9	54	527.3093576410905	NaN	0	527.3092651367188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VIPQPKPFQ_	ENST00000318493.10_1_7:116397827-116398583:+|nuORF	24.20275056022122	0.35506675290109213	4				NaN	NaN	0	NaN	2897	2527	5421
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5427	17.959	NaN	12262	30	0	2595.8	0.106				-1	FMVWLFCLC	9	46	589.2683389873117	NaN	0	589.2681274414062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_FM(Oxidation (M))VWLFCLC_	ENST00000423695.6_1_5:10250480-10261980:+|nuORF	21.70233525837049	0.3635294413921169	4				NaN	NaN	0	NaN	2898	2527	5421
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5428	17.961	NaN	14854	30	0	1704.5	0.042			+	-1	QLVCMCECETM	11	81	746.766357421875	NaN	0	746.766357421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	3 Carbamidomethyl (C),2 Oxidation (M)	_QLVC(Carbamidomethyl (C))M(Oxidation (M))C(Carbamidomethyl (C))EC(Carbamidomethyl (C))ETM(Oxidation (M))_	REV__ENSG00000188487|ENST00000379556|INSC;REV__nc|ENSG00000188487|Q1MX18-4|INSC;REV__nc|ENSG00000188487|Q1MX18-5|INSC;REV__nc|ENSG00000188487|Q1MX18-6|INSC;REV__nc|ENSG00000188487|Q1MX18|INSC	5.55782384252955	0.456735970842152	4				NaN	NaN	0	NaN	2899	2527	5421
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5446	17.998	NaN	8040.3	30	0	1418.7	0.214	+			15547	GVFEGHTSK	9	58	481.24122926314607	NaN	0	481.2413024902344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVFEGHTSK_	ENSG00000103994|ENST00000564754|ZNF106;nc|ENSG00000103994|Q9H2Y7-2|ZNF106;nc|ENSG00000103994|Q9H2Y7|ZNF106	104.0567914643314	0.015064339666778382	4				NaN	NaN	0	NaN	2914	2530	5445
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5447	18.002	NaN	6139.3	30	0	912.88	0.106	+			19479	KASVIEMF	8	43	462.7462587757759	923.4779646183518	2	462.745849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KASVIEMF_	ENSG00000205221|ENST00000379242|VIT;nc|ENSG00000205221|Q6UXI7-2|VIT;nc|ENSG00000205221|Q6UXI7-3|VIT;nc|ENSG00000205221|Q6UXI7-5|VIT;nc|ENSG00000205221|Q6UXI7|VIT	35.200714571348534	0.6875396545722289	4				NaN	NaN	0	NaN	2915	2530	5445
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5448	18.004	NaN	21064	30	0	9796.5	0.106			+	-1	LGGFFTVMSS	10	65	531.2514380058826	1060.4883230785651	2	531.251708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_LGGFFTVM(Oxidation (M))SS_	REV__ENSG00000156113|ENST00000286628|KCNMA1;REV__KCNMA1|p.K692Nfs*15|2|0.26|ENSG00000156113|chr10:77011983-77011983|T/-|frameshift_variant;REV__KCNMA1|p.N449Tfs*33|1|0.18|ENSG00000156113|chr10:77086584-77086584|G/-|frameshift_variant;REV__KCNMA1|p.V168*|2|0.26|ENSG00000156113|chr10:77403900-77403900|C/-|frameshift_variant;REV__nc|ENSG00000156113|Q12791-2|KCNMA1;REV__nc|ENSG00000156113|Q12791-3|KCNMA1;REV__nc|ENSG00000156113|Q12791-4|KCNMA1;REV__nc|ENSG00000156113|Q12791-5|KCNMA1;REV__nc|ENSG00000156113|Q12791-6|KCNMA1;REV__nc|ENSG00000156113|Q12791-7|KCNMA1	37.15910966729921	0.575322462179216	4				NaN	NaN	0	NaN	2916	2530	5445
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5449	18.005	NaN	11939	30	0	1464.9	0.106	+			40204	STSCPVVQK	9	68	503.2552822743269	1004.4960116154538	2	503.2555236816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_STSC(Carbamidomethyl (C))PVVQK_	ENSG00000130935|ENST00000253247|NOL11;ENST00000583108.5_1_17:65733963-65734484:+|nuORF	104.74654710444128	0.034358562718640136	4				NaN	NaN	0	NaN	2917	2530	5445
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5450	18.007	NaN	7423.6	30	0	1530.7	0.106	+			2606	AQGPSSQLK	9	58	458.2485667610917	914.4825805889834	2	458.24853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AQGPSSQLK_	ENST00000349792.9_1_1:151171082-151171205:+|nuORF	51.19269402634007	0.2889735674168909	4				NaN	NaN	0	NaN	2918	2530	5445
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5451	18.009	NaN	6784.1	30	0	2335.5	0.035				-1	TVLKVCKF	8	71	332.1968180007955	NaN	0	332.19757080078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_TVLKVC(Carbamidomethyl (C))KF_	ENSG00000171017|ENST00000306708|LRRC8E;LRRC8E|p.P454Rfs*33|1|0.35|ENSG00000171017|chr19:7899878-7899878|C/-|frameshift_variant	23.04248740728303	1.7418937515398478	4				NaN	NaN	0	NaN	2919	2530	5445
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5452	18.01	NaN	3317.6	30	0	804.41	0.138	+			31488	QLCPLLLT	8	47	450.7664794921875	NaN	0	450.7664794921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QLCPLLLT_	CDK12|p.P526Lfs*84|1|0.16|ENSG00000167258|chr17:39471406-39471406|C/-|frameshift_variant;CDK12|p.P536Hfs*74|1|0.37|ENSG00000167258|chr17:39471435-39471435|C/-|frameshift_variant;CDK12|p.P538Lfs*72|1|0.39|ENSG00000167258|chr17:39471441-39471441|C/-|frameshift_variant	25.450171626174864	1.7418937515398478	4				NaN	NaN	0	NaN	2920	2530	5445
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5471	18.049	NaN	39474	30	0	11782	0.214				-1	 	0	107	324.21683208952425	323.20955562292426	1	324.2169189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	2936	2533	5470
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5472	18.052	NaN	29193	30	0	3124.6	0.106	+			15233	GTSSVIVSRK	10	90	517.3040927239014	1032.5936325146026	2	517.303955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTSSVIVSRK_	ENSG00000072803|ENST00000517395|FBXW11;nc|ENSG00000072803|Q9UKB1-2|FBXW11;nc|ENSG00000072803|Q9UKB1-3|FBXW11;nc|ENSG00000072803|Q9UKB1|FBXW11	96.66504779109242	0.09291513985748291	4				NaN	NaN	0	NaN	2937	2533	5470
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5473	18.054	NaN	36594	30	0	8415.8	0.106	+			6046	AVMGNPKVK	9	79	472.27346112826416	942.5323693233283	2	472.273193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVMGNPKVK_	ENSG00000223609|ENST00000650601|HBD;ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF;HBD|p.A63V|1|0.34|ENSG00000223609|chr11:5234118-5234118|G/A|missense_variant	124.59426212874841	0.018418509520798258	4				NaN	NaN	0	NaN	2938	2533	5470
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5474	18.056	NaN	18982	30	0	3417.9	0.106	+			4114	ATDYGTIKK	9	81	498.77193464474976	995.5293163562995	2	498.7715148925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATDYGTIKK_	ENSG00000112902|ENST00000382496|SEMA5A	182.3913890336628	0.0010559746847940753	4				NaN	NaN	0	NaN	2939	2533	5470
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5475	18.058	NaN	18720	30	0	3155.3	0.106			+	-1	EHCRVCWCQLC	11	90	718.7906494140625	NaN	0	718.7906494140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_EHCRVCWCQLC(Carbamidomethyl (C))_	REV__FNDC9|p.F135C|1|0.22|ENSG00000172568|chr5:157343133-157343133|A/C|missense_variant	25.57405402267927	0.45144328854727944	4				NaN	NaN	0	NaN	2940	2533	5470
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5476	18.06	NaN	4290.2	30	0	1042.6	0.035			+	4387	ATHLVIRPA	9	73	326.53439267999613	976.5813486401885	3	326.5345458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATHLVIRPA_	REV__ORC3|p.A598V|1|0.34|ENSG00000135336|chr6:87663104-87663104|C/T|missense_variant	21.9598887501803	0.5980208138527809	4				NaN	NaN	0	NaN	2941	2533	5470
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5477	18.061	NaN	20418	30	0	15583	0.141				-1	VVKVSDFGMA	10	65	534.7727396183719	1067.5309263035438	2	534.7724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_VVKVSDFGM(Oxidation (M))A_	ENSG00000135605|ENST00000381501|TEC	26.69291269510374	0.6618461711292317	4				NaN	NaN	0	NaN	2942	2533	5470
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5496	18.099	NaN	190170	30	0	29737	0.214			+	38126	SPVVLQNDR	9	128	514.2811498861441	NaN	0	514.2803955078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SPVVLQNDR_	REV__ENSG00000232810|ENST00000449264|TNF	85.16082228582465	0.053699699744190164	4				NaN	NaN	0	NaN	2958	2536	5495
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5497	18.102	NaN	19751	30	0	1969.7	0.106	+			40218	STSDSVRLK	9	84	496.77274251124345	991.5309320892869	2	496.77215576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STSDSVRLK_	ENSG00000187735|ENST00000521604|TCEA1;ENST00000521086.6_1_8:54891227-54912595:-|nuORF;ENST00000522397.5_1_8:54883012-54934915:-|nuORF;nc|ENSG00000187735|P23193-2|TCEA1	154.1183686248401	0.005909203230691971	4				NaN	NaN	0	NaN	2959	2536	5495
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5498	18.104	NaN	4359.8	30	0	419.86	0.106	+			6800	CGAAPKVK	8	59	387.22039203706663	772.4262311409333	2	387.2206726074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_CGAAPKVK_	ENST00000579114.5_1_17:10633139-10657581:+|nuORF	52.29916861842294	0.578018602984656	4				NaN	NaN	0	NaN	2960	2536	5495
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5499	18.106	NaN	4772.8	30	0	575.21	0.106			+	505	ACFYDAED	8	65	467.16797660491227	932.3214002766246	2	467.16741943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ACFYDAED_	REV__CON__ENSEMBL:ENSBTAP00000014147	28.2542754592877	0.7411748056684583	4				NaN	NaN	0	NaN	2961	2536	5495
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5500	18.108	NaN	17996	30	0	1543.9	0.106	+			4827	ATNYITRNK	9	79	540.7938907096137	1079.5732284860273	2	540.7939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATNYITRNK_	ENSG00000100029|ENST00000354694|PES1;ENST00000466614.1_1_22:30983271-30987820:-|nuORF;nc|ENSG00000100029|O00541-2|PES1	146.78539889680295	0.007618400906539062	4				NaN	NaN	0	NaN	2962	2536	5495
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5501	18.11	NaN	9868.8	30	0	1196.2	0.038			+	42710	TDECYDCMFD	10	59	621.194021362877	NaN	0	621.3416748046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TDECYDCMFD_	REV__ENSG00000102935|ENST00000563137|ZNF423;REV__nc|ENSG00000102935|Q2M1K9-2|ZNF423;REV__nc|ENSG00000102935|Q2M1K9|ZNF423;REV__ZNF423|p.Q394Rfs*36|1|0.13|ENSG00000102935|chr16:49637973-49637973|C/-|frameshift_variant	15.641811463095205	0.4201028297492154	4				NaN	NaN	0	NaN	2963	2536	5495
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5502	18.11	NaN	7861.3	30	0	1704.6	0.142	+			23877	LDGKLRFTAK	10	46	574.8434003870441	1147.672247840888	2	575.7359619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LDGKLRFTAK_	ENST00000421407.1_1:144593821-144594396:+|nuORF;ENST00000429694.1_1:144593815-144598517:+|nuORF	14.693671053092006	0.741784362295702	4				NaN	NaN	0	NaN	2964	2536	5495
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5520	18.149	NaN	22066	30	0	6304.7	0.214	+			40717	SVCGKGFSR	9	80	499.2481815985079	996.4818102638159	2	499.2480773925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SVC(Carbamidomethyl (C))GKGFSR_	ENSG00000136451|ENST00000581208|VEZF1;ENST00000423931.1_1_3:192873384-192874521:-|nuORF	96.66504779109242	0.04607440320619715	4				NaN	NaN	0	NaN	2979	2539	5519
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5521	18.153	NaN	12395	30	0	1955	0.106	+			41525	SVPVSAVFMD	10	67	526.259451123279	1050.5043493133578	2	526.2597045898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVPVSAVFMD_	ENSG00000128915|ENST00000261520|ICE2;ICE2|p.R760Tfs*25|1|0.32|ENSG00000128915|chr15:60447987-60447988|-/T|frameshift_variant	51.33545320467046	0.4446945571623749	4				NaN	NaN	0	NaN	2980	2539	5519
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5522	18.155	NaN	9963.8	30	0	5773.5	0.106				-1	SVCGKGFSR	9	61	333.1673678449689	996.4802741351068	3	333.1676940917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SVC(Carbamidomethyl (C))GKGFSR_	ENSG00000136451|ENST00000581208|VEZF1;ENST00000423931.1_1_3:192873384-192874521:-|nuORF	36.446750945000026	0.4619375763483977	4				NaN	NaN	0	NaN	2981	2539	5519
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5523	18.157	NaN	7618.4	30	0	1488.2	0.106				-1	NCCRPSYCQ	9	67	565.7115430036522	1129.4085330741043	2	565.8092041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_NC(Carbamidomethyl (C))CRPSYCQ_	ENSG00000171396|ENST00000390661|KRTAP4-4	26.69291269510374	0.5537881896960711	4				NaN	NaN	0	NaN	2982	2539	5519
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5524	18.158	NaN	6174.2	30	0	1218.7	0.106				-1	VVSEEGAVHM	10	55	537.2495162895024	NaN	0	537.2496948242188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_VVSEEGAVHM(Oxidation (M))_	ENSG00000215421|ENST00000299687|ZNF407;ENST00000579200.1_1_18:72775002-72776421:+|nuORF	51.33545320467046	0.297159550775418	4				NaN	NaN	0	NaN	2983	2539	5519
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5525	18.16	NaN	6483.2	30	0	1622.8	0.037			+	50028	WDPTDDQEQ	9	52	567.2217192797273	NaN	0	567.222900390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_WDPTDDQEQ_	REV__ENSG00000128059|ENST00000264220|PPAT;REV__ENST00000496669.1_1_3:87101304-87101523:-|nuORF;REV__PPAT|p.F373Lfs*16|1|0.1|ENSG00000128059|chr4:56399296-56399296|A/-|frameshift_variant;REV__PPAT|p.K178Nfs*35|1|0.04|ENSG00000128059|chr4:56403157-56403167|TGGGTGCTTCC/-|frameshift_variant	32.81241826257853	0.3119040447479903	4				NaN	NaN	0	NaN	2984	2539	5519
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5526	18.161	NaN	13805	30	0	8644.3	0.14			+	48576	VTQGAQYQK	9	65	511.76884754113854	1021.5231421490771	2	511.7685241699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VTQGAQYQK_	REV__ENSG00000148843|ENST00000369797|PDCD11	32.81241826257853	0.4965981579233955	4				NaN	NaN	0	NaN	2985	2539	5519
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5544	18.199	NaN	192400	30	0	19713	0.154				-1	 	0	112	509.7984941143111	1017.5824352954222	2	509.7982177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3000	2542	5543
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5545	18.202	NaN	38826	30	0	5452.6	0.106	+			5859	AVIQGQAVRK	10	79	535.327500466168	1068.6404479991359	2	535.3276977539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVIQGQAVRK_	ENSG00000099812|ENST00000215582|MISP	143.37361013837676	0.009854612225601756	4				NaN	NaN	0	NaN	3001	2542	5543
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5546	18.204	NaN	42022	30	0	11453	0.106			+	38314	SRDGLEDEK	9	66	524.7485490871542	1047.4825452411083	2	524.7484130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SRDGLEDEK_	REV__ENSG00000150782|ENST00000280357|IL18;REV__ENST00000525547.5_1_11:112014321-112020942:-|nuORF;REV__nc|ENSG00000150782|Q14116-2|IL18	71.87747018426188	0.13267044672804276	4				NaN	NaN	0	NaN	3002	2542	5543
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5547	18.206	NaN	5583.9	30	0	565.43	0.106			+	-1	IGIPCSLFF	9	55	527.2754351243349	1052.5363173154697	2	527.2756958007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_IGIPC(Carbamidomethyl (C))SLFF_	REV__ENSG00000134369|ENST00000685211|NAV1;REV__nc|ENSG00000134369|Q8NEY1-2|NAV1;REV__nc|ENSG00000134369|Q8NEY1-3|NAV1;REV__nc|ENSG00000134369|Q8NEY1-4|NAV1;REV__nc|ENSG00000134369|Q8NEY1-5|NAV1;REV__nc|ENSG00000134369|Q8NEY1-7|NAV1;REV__nc|ENSG00000134369|Q8NEY1|NAV1	35.200714571348534	0.47427825964483533	4				NaN	NaN	0	NaN	3003	2542	5543
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5548	18.208	NaN	3078.6	30	0	483.11	0.106				-1	 	0	66	325.1289842689158	324.1217078023158	1	325.8575439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3004	2542	5543
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5549	18.21	NaN	9556.9	30	0	1693.7	0.106	+			21484	KNKKDFIQK	9	71	574.8434003870441	1147.672247840888	2	574.8433837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KNKKDFIQK_	CCDC148|p.K420Nfs*15|2|0.39|ENSG00000153237|chr2:158220705-158220705|T/-|frameshift_variant;ENSG00000153237|ENST00000283233|CCDC148;ENST00000451554.1_1_2:159145303-159312956:-|nuORF;nc|ENSG00000153237|Q8NFR7-2|CCDC148;nc|ENSG00000153237|Q8NFR7-4|CCDC148	106.68306549817024	0.032382560583716295	4				NaN	NaN	0	NaN	3005	2542	5543
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5550	18.211	NaN	11697	30	0	2640.3	0.037			+	-1	YCPLKTLASD	10	62	584.2891101040776	1166.5636672749552	2	584.288818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_YC(Carbamidomethyl (C))PLKTLASD_	REV__ENSG00000196367|ENST00000456197|TRRAP;REV__nc|ENSG00000196367|Q9Y4A5-2|TRRAP;REV__nc|ENSG00000196367|Q9Y4A5|TRRAP;REV__TRRAP-ASNS|1|fusion;REV__TRRAP-ASNS|2|fusion;REV__TRRAP|p.A1620Cfs*35|1|0.27|ENSG00000196367|chr7:98949499-98949500|-/G|frameshift_variant;REV__TRRAP|p.K3443Sfs*19|1|0.28|ENSG00000196367|chr7:99004246-99004246|A/-|frameshift_variant;REV__TRRAP|p.P1360Afs*14|1|0.05|ENSG00000196367|chr7:98935641-98935642|-/GCAAATAA|frameshift_variant	39.252832667884924	0.5560298534376815	4				NaN	NaN	0	NaN	3006	2542	5543
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5551	18.212	NaN	6822.5	30	0	864.02	0.141	+			14520	GTDGVGTKLK	10	74	488.27714215237677	NaN	0	488.2821350097656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_GTDGVGTKLK_	ENSG00000159131|ENST00000381815|GART;ENST00000424203.5_1_21:34876433-34900844:-|nuORF;ENST00000460305.1_1_21:34892913-34894585:-|nuORF;GART|p.K807Gfs*26|1|0.08|ENSG00000159131|chr21:33509815-33509816|TT/-|frameshift_variant	101.45984612302182	0.010523654147385104	4				NaN	NaN	0	NaN	3007	2542	5543
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5570	18.252	NaN	16237	30	0	1898.6	0.214	+			2675	AQNEPLTQK	9	77	514.7731240696661	NaN	0	514.7725830078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AQNEPLTQK_	ENSG00000156304|ENST00000286835|SCAF4;ENST00000467731.1_1_21:33057290-33073360:-|nuORF;nc|ENSG00000156304|O95104-2|SCAF4;nc|ENSG00000156304|O95104-3|SCAF4;SCAF4|p.E653Qfs*24|1|0.4|ENSG00000156304|chr21:31688393-31688394|-/TG|frameshift_variant;SCAF4|p.V1113Cfs*7|1|0.22|ENSG00000156304|chr21:31671506-31671506|C/-|frameshift_variant	126.24258497203832	0.0011674249988053026	4				NaN	NaN	0	NaN	3023	2545	5569
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5571	18.255	NaN	9153.9	30	0	1199.3	0.106	+			5809	AVIEHLKQK	9	77	533.3244733568085	1064.634393780417	2	533.3245849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVIEHLKQK_	BPTF|p.D2844Afs*20|1|0.08|ENSG00000171634|chr17:67959766-67959767|-/C|frameshift_variant;BPTF|p.K2718Nfs*36|3|0.12|ENSG00000171634|chr17:67948150-67948150|A/-|frameshift_variant;ENSG00000171634|ENST00000306378|BPTF;nc|ENSG00000171634|Q12830-4|BPTF;nc|ENSG00000171634|Q12830|BPTF	126.24258497203832	0.01742065577488747	4				NaN	NaN	0	NaN	3024	2545	5569
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5572	18.257	NaN	80940	30	0	29554	0.106			+	43178	TETSVSSA	8	88	391.1822651209093	780.3499773086186	2	391.182373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TETSVSSA_	REV__ENSG00000133477|ENST00000333407|FAM83F;REV__nc|ENSG00000133477|Q8NEG4-2|FAM83F	35.200714571348534	0.6875396545722289	4				NaN	NaN	0	NaN	3025	2545	5569
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5573	18.259	NaN	11876	30	0	3005.2	0.106				-1	EERSRCFS	8	64	535.7387114961477	NaN	0	535.7385864257812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_EERSRC(Carbamidomethyl (C))FS_	ENST00000334512.9_1_10:80899458-80921889:+|nuORF	31.954861631926434	1.7418937515398478	4				NaN	NaN	0	NaN	3026	2545	5569
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5574	18.261	NaN	11989	30	0	4211.2	0.106	+			10524	EVYYCSYCT	9	59	565.7115430036522	1129.4085330741043	2	565.7114868164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EVYYCSYCT_	ZNF521|p.S561Y|1|0.27|ENSG00000198795|chr18:25226236-25226236|G/T|missense_variant	17.364965105453717	0.6112419832031293	4				NaN	NaN	0	NaN	3027	2545	5569
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5575	18.263	NaN	8503.7	30	0	2580.8	0.036				-1	KCMFEGCSK	9	60	545.2312156508392	1088.4478783684783	2	545.2310180664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_KC(Carbamidomethyl (C))MFEGCSK_	ENSG00000174332|ENST00000628545|GLIS1;GLIS1|p.H410Ifs*53|1|0.33|ENSG00000174332|chr1:53514755-53514755|G/-|frameshift_variant;nc|ENSG00000174332|Q8NBF1|GLIS1	39.252832667884924	0.4290233611298554	4				NaN	NaN	0	NaN	3028	2545	5569
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5576	18.263	NaN	6753	30	0	2287.7	0.143			+	-1	GMLMVLLLT	9	59	336.1940332919502	1005.5602704760506	3	336.1942138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_GMLM(Oxidation (M))VLLLT_	REV__LRRTM4|p.T28M|1|0.3|ENSG00000176204|chr2:77519786-77519786|G/A|missense_variant	35.61828744233558	0.47037581924408073	4				NaN	NaN	0	NaN	3029	2545	5569
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5594	18.303	NaN	18898	30	0	3796	0.214	+			49097	VVLENAAKK	9	73	486.29833115112115	970.5821093690423	2	486.2980651855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVLENAAKK_	ENSG00000171824|ENST00000376936|EXOSC10;ENST00000474216.5_1_1:11126777-11137033:-|nuORF;nc|ENSG00000171824|Q01780-2|EXOSC10	150.36159442982594	0.006784847064083231	4				NaN	NaN	0	NaN	3044	2548	5593
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5595	18.306	NaN	17239	30	0	2009.4	0.106	+			40413	STVGSAISRK	10	84	503.2885812223957	1004.5626095115914	2	503.2883605957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STVGSAISRK_	ENSG00000101150|ENST00000346249|TPD52L2;nc|ENSG00000101150|O43399-2|TPD52L2;nc|ENSG00000101150|O43399-3|TPD52L2;nc|ENSG00000101150|O43399-4|TPD52L2;nc|ENSG00000101150|O43399-5|TPD52L2;nc|ENSG00000101150|O43399-6|TPD52L2;nc|ENSG00000101150|O43399-7|TPD52L2	126.24258497203832	0.01851300475414303	4				NaN	NaN	0	NaN	3045	2548	5593
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5596	18.308	NaN	12084	30	0	6455.4	0.106			+	10006	ERPEPNAVW	9	53	549.2719054652562	1096.5292579973122	2	549.2726440429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ERPEPNAVW_	REV__ENST00000590740.2_2_17:41322312-41322399:-|nuORF	21.9598887501803	0.5980208138527809	4				NaN	NaN	0	NaN	3046	2548	5593
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5597	18.31	NaN	7950.7	30	0	796.49	0.106	+			8877	EERRVKEVV	9	46	381.8875026692059	1142.6406786078178	3	381.88775634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EERRVKEVV_	ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88813329-88813827:+|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P	32.81241826257853	0.4965981579233955	4				NaN	NaN	0	NaN	3047	2548	5593
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5598	18.312	NaN	16856	30	0	3028.3	0.106			+	11198	FHKVRRHK	8	77	554.3361441876908	1106.6577354421815	2	554.3360595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FHKVRRHK_	REV__ENSG00000137760|ENST00000428149|ALKBH8;REV__nc|ENSG00000137760|Q96BT7-2|ALKBH8;REV__nc|ENSG00000137760|Q96BT7-3|ALKBH8;REV__nc|ENSG00000137760|Q96BT7-4|ALKBH8	53.351449002276354	0.5676011784961348	4				NaN	NaN	0	NaN	3048	2548	5593
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5599	18.314	NaN	11616	30	0	2782.6	0.037			+	-1	CMYPPVHPH	9	61	577.248157191702	1152.481761450204	2	577.2479248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),Oxidation (M)	_C(Carbamidomethyl (C))M(Oxidation (M))YPPVHPH_	REV__DIP2B|p.V893Gfs*91|1|0.06|ENSG00000066084|chr12:50714417-50714418|-/G|frameshift_variant	21.70233525837049	0.6004277881119521	4				NaN	NaN	0	NaN	3049	2548	5593
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5600	18.315	NaN	17403	30	0	3602.3	0.142			+	-1	SLPNVKMLSY	10	69	584.3074835748806	1166.6004142165611	2	584.307373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_SLPNVKM(Oxidation (M))LSY_	REV__DIP2C|p.H1200Lfs*7|1|0.08|ENSG00000151240|chr10:329587-329588|-/GCCCA|frameshift_variant;REV__ENSG00000151240|ENST00000280886|DIP2C	31.529811441608018	0.6223461015008678	4				NaN	NaN	0	NaN	3050	2548	5593
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5619	18.354	NaN	44234	30	0	13393	0.215	+			40727	SVCGKSFSR	9	84	514.2534509260685	NaN	0	514.2532958984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SVC(Carbamidomethyl (C))GKSFSR_	ENSG00000278129|ENST00000621650|ZNF8	109.82975700811294	0.009850873779726326	4				NaN	NaN	0	NaN	3066	2551	5618
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5620	18.358	NaN	11947	30	0	2279.3	0.106	+			47069	VLHRDLKPA	9	78	524.8169585855704	1047.6193642379408	2	524.8169555664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VLHRDLKPA_	CDK19|p.W146R|1|0.31|ENSG00000155111|chr6:110667454-110667454|A/G|missense_variant;CDK8|p.L359*|1|0.13|ENSG00000132964|chr13:26401309-26401309|T/-|frameshift_variant;ENSG00000069956|ENST00000261845|MAPK6;ENSG00000117650|ENST00000366999|NEK2;ENSG00000132964|ENST00000381527|CDK8;ENSG00000141639|ENST00000400384|MAPK4;ENSG00000155111|ENST00000368911|CDK19;MAPK6|p.P206*|1|0.03|ENSG00000069956|chr15:52050053-52050054|CC/-|frameshift_variant;nc|ENSG00000117650|P51955-2|NEK2;nc|ENSG00000117650|P51955-3|NEK2;nc|ENSG00000117650|P51955-4|NEK2;nc|ENSG00000132964|P49336-2|CDK8;nc|ENSG00000155111|Q9BWU1-2|CDK19	98.58198989935565	0.04066992115528678	4				NaN	NaN	0	NaN	3067	2551	5618
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5621	18.36	NaN	6297.8	30	0	1261.7	0.106			+	9299	EHTDRSINT	9	62	536.7542724609375	NaN	0	536.7542724609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EHTDRSINT_	REV__ENSG00000188738|ENST00000424728|FSIP2;REV__FSIP2|p.D5579Mfs*10|1|0.09|ENSG00000188738|chr2:185806029-185806029|A/-|frameshift_variant;REV__FSIP2|p.K6152Rfs*27|1|0.43|ENSG00000188738|chr2:185807758-185807758|A/-|frameshift_variant;REV__FSIP2|p.K6528Nfs*5|1|0.33|ENSG00000188738|chr2:185808884-185808884|A/-|frameshift_variant;REV__FSIP2|p.V5734Yfs*24|2|0.23|ENSG00000188738|chr2:185806499-185806499|A/-|frameshift_variant;REV__FSIP2|p.V6322*|1|0.42|ENSG00000188738|chr2:185808265-185808265|A/-|frameshift_variant;REV__nc|ENSG00000188738|Q5CZC0-2|FSIP2	42.396135135203025	0.2590952873412954	4				NaN	NaN	0	NaN	3068	2551	5618
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5622	18.362	NaN	17762	30	0	3901.3	0.106			+	9561	ELGAEEENEG	10	78	538.7234185268334	1075.4322841204666	2	538.7234497070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ELGAEEENEG_	REV__ENSG00000064933|ENST00000441310|PMS1;REV__ENST00000421722.5_1_2:190656520-190720594:+|nuORF;REV__nc|ENSG00000064933|P54277-2|PMS1;REV__nc|ENSG00000064933|P54277-3|PMS1;REV__nc|ENSG00000064933|P54277-4|PMS1	49.44154591367651	0.46214596422418036	4				NaN	NaN	0	NaN	3069	2551	5618
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5623	18.363	NaN	15617	30	0	2945.4	0.106	+			23760	LCGEQPMCWE	10	76	606.2296443305164	1210.4447357278327	2	606.2296752929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_LCGEQPM(Oxidation (M))CWE_	ENSG00000145198|ENST00000691901|VWA5B2;ENST00000461141.5_1_3:183952309-183959823:+|nuORF;VWA5B2|p.V1061Gfs*60|1|0.12|ENSG00000145198|chr3:184241398-184241399|-/C|frameshift_variant	42.396135135203025	0.5270658956260207	4				NaN	NaN	0	NaN	3070	2551	5618
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5624	18.365	NaN	9427.8	30	0	1628	0.038	+			21658	KPYECMECGK	10	67	594.2502706639443	1186.4859883946885	2	594.2501831054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KPYECMECGK_	ENSG00000180479|ENST00000451802|ZNF571;ENSG00000196418|ENST00000543802|ZNF124;ENSG00000204524|ENST00000414468|ZNF805;nc|ENSG00000196418|Q15973-1|ZNF124;nc|ENSG00000196418|Q15973-2|ZNF124;nc|ENSG00000196418|Q15973-4|ZNF124;nc|ENSG00000204524|Q5CZA5-2|ZNF805;ZNF124|p.A214Dfs*12|1|0.07|ENSG00000196418|chr1:247156981-247156982|-/T|frameshift_variant	36.446750945000026	0.5818864909973037	4				NaN	NaN	0	NaN	3071	2551	5618
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5625	18.366	NaN	9890.7	30	0	2972.8	0.142				-1	PTTTVSASCSQ	11	70	569.7547099219618	1137.4948669107234	2	569.7537231445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_PTTTVSASC(Carbamidomethyl (C))SQ_	ENSG00000135903|ENST00000392070|PAX3;nc|ENSG00000135903|P23760-6|PAX3;nc|ENSG00000135903|P23760-8|PAX3;nc|ENSG00000135903|P23760|PAX3	29.170058357718403	0.683821074385409	4				NaN	NaN	0	NaN	3072	2551	5618
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5643	18.404	NaN	209610	30	0	62391	0.214	+			5138	ATSTGGIVNK	10	106	474.2615281171122	946.5085033010245	2	474.26129150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSTGGIVNK_	ENSG00000162174|ENST00000415229|ASRGL1;ENST00000534183.5_1_11:62105600-62156860:+|nuORF;nc|ENSG00000162174|Q7L266-2|ASRGL1	204.624747049445	1.7854710275967025E-06	4				NaN	NaN	0	NaN	3087	2554	5642
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5644	18.408	NaN	26807	30	0	2355.8	0.106	+			49545	VYAQKHQQL	9	83	557.8042505750708	NaN	0	557.8042602539062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYAQKHQQL_	ENSG00000197323|ENST00000358465|TRIM33;nc|ENSG00000197323|Q9UPN9-2|TRIM33;TRIM33|p.L700Efs*5|1|0.07|ENSG00000197323|chr1:114410281-114410282|-/CAGAATTCTCC|frameshift_variant	148.04295825190792	0.001563811321774451	4				NaN	NaN	0	NaN	3088	2554	5642
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5645	18.41	NaN	12487	30	0	1426.2	0.106	+			5510	AVAEGAKNVVK	11	76	543.3195969745866	NaN	0	543.319580078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVAEGAKNVVK_	ENSG00000160447|ENST00000291906|PKN3;PKN3|p.C465Afs*43|1|0.27|ENSG00000160447|chr9:128714271-128714271|C/-|frameshift_variant;PKN3|p.Y778Tfs*82|1|0.29|ENSG00000160447|chr9:128719968-128719968|C/-|frameshift_variant	76.16968421966216	0.10092066013610061	4				NaN	NaN	0	NaN	3089	2554	5642
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5646	18.411	NaN	19605	30	0	2680.5	0.106	+			13782	GQGVNNVPK	9	75	456.7486193069215	911.482685680643	2	456.7483215332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GQGVNNVPK_	ENSG00000179119|ENST00000336349|SPTY2D1;ENST00000536336.5_1_11:18633859-18655855:-|nuORF;nc|ENSG00000179119|Q68D10-2|SPTY2D1;nc|ENSG00000179119|Q68D10-3|SPTY2D1;SPTY2D1|p.P485Rfs*12|1|0.3|ENSG00000179119|chr11:18614820-18614820|G/-|frameshift_variant	108.08749611321984	0.03094949498378333	4				NaN	NaN	0	NaN	3090	2554	5642
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5647	18.413	NaN	2508.3	30	0	417.51	0.106	+			41895	SVTTSATE	8	46	398.1899290487727	794.3653051643454	2	398.190185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVTTSATE_	CLASRP|p.P95Lfs*81|3|0.29|ENSG00000104859|chr19:45052871-45052871|C/-|frameshift_variant	18.324413293986947	0.7971860551947066	4				NaN	NaN	0	NaN	3091	2554	5642
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5648	18.415	NaN	18441	30	0	3406.9	0.038			+	-1	SCCAGDHYADL	11	68	606.2267870548725	NaN	0	606.2305908203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_SC(Carbamidomethyl (C))CAGDHYADL_	REV__ENSG00000162231|ENST00000294172|NXF1;REV__ENST00000533440.1_1_11:62562405-62563999:-|nuORF;REV__NXF1|p.S494Cfs*29|1|0.38|ENSG00000162231|chr11:62795923-62795924|AG/-|frameshift_variant	19.1035232394073	0.456735970842152	4				NaN	NaN	0	NaN	3092	2554	5642
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5649	18.416	NaN	15586	30	0	6209.2	0.141			+	-1	EECCQEAK	8	64	527.2037287713079	1052.3929046094156	2	527.2579345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C)	_EEC(Carbamidomethyl (C))C(Carbamidomethyl (C))QEAK_	REV__C9|p.L339Ffs*10|1|0.22|ENSG00000113600|chr5:39311231-39311232|-/A|frameshift_variant;REV__C9|p.M293Cfs*5|1|0.21|ENSG00000113600|chr5:39311371-39311371|T/-|frameshift_variant;REV__C9|p.N277Mfs*21|1|0.37|ENSG00000113600|chr5:39315815-39315815|T/-|frameshift_variant;REV__ENSG00000113600|ENST00000263408|C9	21.9598887501803	0.7897753010812679	4				NaN	NaN	0	NaN	3093	2554	5642
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5667	18.453	NaN	19882	30	0	3128.1	0.214			+	35132	SAIAAKVKQ	9	83	458.2848707263743	914.5551885195487	2	458.2846984863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAIAAKVKQ_	REV__CIC|p.E1288Gfs*56|1|0.3|ENSG00000079432|chr19:42293654-42293655|-/G|frameshift_variant;REV__CIC|p.P1248Hfs*54|3|0.34|ENSG00000079432|chr19:42293224-42293224|C/-|frameshift_variant;REV__CIC|p.T1217Nfs*6|1|0.23|ENSG00000079432|chr19:42293133-42293134|-/A|frameshift_variant;REV__ENSG00000079432|ENST00000681038|CIC;REV__nc|ENSG00000079432|Q96RK0-2|CIC	153.03582135801034	0.006161527642367307	4				NaN	NaN	0	NaN	3108	2557	5666
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5668	18.456	NaN	5901.6	30	0	1898.3	0.106	+			9116	EGLASDMSDE	10	52	527.203857421875	NaN	0	527.203857421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EGLASDMSDE_	ENST00000465250.6_1_19:16742403-16758047:-|nuORF	20.94693142431847	0.4201028297492154	4				NaN	NaN	0	NaN	3109	2557	5666
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5669	18.458	NaN	11546	30	0	2763.6	0.106	+			4175	ATFKLEKNK	9	73	539.8170130459947	1077.6194731587893	2	539.8171997070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATFKLEKNK_	DHX29|p.D780Tfs*15|1|0.32|ENSG00000067248|chr5:55276356-55276356|T/-|frameshift_variant;DHX29|p.I805Nfs*17|1|0.27|ENSG00000067248|chr5:55276281-55276282|-/C|frameshift_variant;DHX29|p.K807Nfs*16|1|0.19|ENSG00000067248|chr5:55276272-55276272|T/-|frameshift_variant;ENSG00000067248|ENST00000251636|DHX29;ENST00000504778.5_1_5:54579003-54603452:-|nuORF	89.02883481214508	0.06760336634167786	4				NaN	NaN	0	NaN	3110	2557	5666
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5670	18.46	NaN	7630.8	30	0	1689.2	0.106	+			4044	ATDDYHYEK	9	66	571.2439192644417	1140.4732855956834	2	571.2439575195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATDDYHYEK_	ENSG00000136819|ENST00000372447|C9orf78	49.536043120802724	0.308405419312776	4				NaN	NaN	0	NaN	3111	2557	5666
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5671	18.462	NaN	18323	30	0	9392.4	0.106	+			5889	AVKVIDKTK	9	84	334.5499168905902	NaN	0	334.5500183105469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVKVIDKTK_	ENSG00000163788|ENST00000296088|SNRK;ENST00000462810.1_1_3:43344695-43373803:+|nuORF;nc|ENSG00000163788|Q9NRH2-2|SNRK;SNRK|p.N144Sfs*5|1|0.29|ENSG00000163788|chr3:43303634-43303635|AT/-|frameshift_variant	26.69291269510374	0.34280015626154364	4				NaN	NaN	0	NaN	3112	2557	5666
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5672	18.464	NaN	3858.2	30	0	805.31	0.035			+	27719	MQLCPCSSK	9	47	498.7203523435922	995.4261517539844	2	498.7201232910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MQLCPCSSK_	REV__L1PA3_dup1115|chr2:110017555-110020014:+|1.763195504976095|0.4680770941019235|1.91|454.0|9|1|sense;REV__L1PA3_dup1120|chr2:110351377-110353837:-|1.852683732690941|0.4358200479832063|2.09|470.0|9|1|sense	20.94693142431847	0.6074874384046576	4				NaN	NaN	0	NaN	3113	2557	5666
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5673	18.464	NaN	3439.3	30	0	761.32	0.14				-1	 	0	40	507.22475708062973	506.21748061402974	1	507.2247619628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3114	2557	5666
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5691	18.504	NaN	8612.7	30	0	1694.3	0.214	+			15437	GTYSIGKEK	9	73	491.76414285456855	981.5137327759371	2	491.7637939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTYSIGKEK_	DCLRE1A|p.V898Wfs*37|1|0.34|ENSG00000198924|chr10:113841535-113841535|T/-|frameshift_variant;ENSG00000198924|ENST00000361384|DCLRE1A	76.16968421966216	0.11411088698345859	4				NaN	NaN	0	NaN	3129	2560	5690
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5692	18.507	NaN	9838.4	30	0	2401.6	0.106	+			16992	HPSLGSPG	8	48	376.1901259329922	750.3656989327844	2	376.1902770996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HPSLGSPG_	ENST00000281938.6_1_12:119617352-119617418:+|nuORF;HSPB8|p.P89Hfs*12|1|0.47|ENSG00000152137|chr12:119179572-119179572|C/-|frameshift_variant	52.29916861842294	0.578018602984656	4				NaN	NaN	0	NaN	3130	2560	5690
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5693	18.509	NaN	5455.2	30	0	787.2	0.106	+			40987	SVGLVLGAFI	10	78	325.8660193595412	NaN	0	325.8659973144531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVGLVLGAFI_	ENSG00000170214|ENST00000306675|ADRA1B	22.579656572578934	0.4201028297492154	4				NaN	NaN	0	NaN	3131	2560	5690
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5694	18.511	NaN	10778	30	0	3192.8	0.106	+			13092	GFVKVVKNK	9	76	509.8244187790891	1017.6342846249782	2	509.8241271972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GFVKVVKNK_	ENSG00000122406|ENST00000370321|RPL5	108.08749611321984	0.03094949498378333	4				NaN	NaN	0	NaN	3132	2560	5690
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5695	18.513	NaN	6272.7	30	0	935.31	0.106	+			28426	NEVEKKESL	9	70	538.2856107534441	NaN	0	538.28564453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NEVEKKESL_	ENSG00000006747|ENST00000297029|SCIN;nc|ENSG00000006747|Q9Y6U3-3|SCIN	83.6470233535746	0.058886874190800687	4				NaN	NaN	0	NaN	3133	2560	5690
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5696	18.515	NaN	18088	30	0	11176	0.034	+			32429	QVIAGAVHK	9	61	461.7773715373238	921.5401901414476	2	461.77691650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QVIAGAVHK_	ENSG00000165943|ENST00000298894|MOAP1	104.74654710444128	0.034358562718640136	4				NaN	NaN	0	NaN	3134	2560	5690
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5697	18.515	NaN	1055.4	30	0	102.76	0.143	+			24850	LKDGDTIGVKN	11	39	387.21570922257735	1158.625298267932	3	387.2160949707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LKDGDTIGVKN_	ENSG00000085982|ENST00000678225|USP40;nc|ENSG00000085982|Q9NVE5-3|USP40;nc|ENSG00000085982|Q9NVE5|USP40	29.550750289552195	0.6798279264880025	4				NaN	NaN	0	NaN	3135	2560	5690
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5715	18.554	NaN	10023	30	0	1594.2	0.214	+			15162	GTSGELSVKEK	11	70	567.8040289067454	1133.5935048802908	2	567.804443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTSGELSVKEK_	ENSG00000173517|ENST00000682557|PEAK1;PEAK1|p.F1319Lfs*11|1|0.37|ENSG00000173517|chr15:77133125-77133125|A/-|frameshift_variant;PEAK1|p.N1433Tfs*19|1|0.1|ENSG00000173517|chr15:77115099-77115099|T/-|frameshift_variant;PEAK1|p.Q863Kfs*186|1|0.48|ENSG00000173517|chr15:77179340-77179340|G/-|frameshift_variant	94.4091291819064	0.0807249280027251	4				NaN	NaN	0	NaN	3150	2563	5714
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5716	18.558	NaN	4963.3	30	0	1825	0.106			+	22335	KTGAAGSSAR	10	56	453.2429638873242	904.4713748414484	2	453.2427978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTGAAGSSAR_	REV__ENST00000561933.1_1_16:68344571-68344829:-|nuORF	53.08895987439943	0.42869529153390606	4				NaN	NaN	0	NaN	3151	2563	5714
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5717	18.56	NaN	8099.5	30	0	1643.8	0.106			+	33699	RPDVAFEPHGQ	11	60	626.8046875	NaN	0	626.8046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RPDVAFEPHGQ_	REV__CHD8|p.N2371Ifs*6|1|0.32|ENSG00000100888|chr14:21391017-21391017|T/-|frameshift_variant;REV__CHD8|p.N2371Kfs*2|2|0.24|ENSG00000100888|chr14:21391016-21391017|-/T|frameshift_variant;REV__ENSG00000100888|ENST00000646647|CHD8;REV__nc|ENSG00000100888|Q9HCK8-2|CHD8	28.081489160057373	0.4402687122534875	4				NaN	NaN	0	NaN	3152	2563	5714
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5718	18.562	NaN	3480	30	0	899.57	0.106				-1	 	0	51	494.26045741780564	493.25318095120565	1	494.20574951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3153	2563	5714
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5719	18.563	NaN	4566.5	30	0	564.35	0.106			+	18071	IKEREQKTL	9	63	382.2277299061441	1143.6613603186322	3	382.2279357910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IKEREQKTL_	REV__tr|U7T3F9|U7T3F9_FUSNUPACdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00261PE=4SV=1	41.42661286455405	0.403525789677298	4				NaN	NaN	0	NaN	3154	2563	5714
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5720	18.565	NaN	2190.4	30	0	229.98	0.035			+	33702	RPEPKPPAP	9	65	330.19061578974436	987.5500179694332	3	330.1907958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RPEPKPPAP_	REV__ENSG00000182952|ENST00000377575|HMGN4	30.317721548370564	0.5199124245378496	4				NaN	NaN	0	NaN	3155	2563	5714
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5721	18.566	NaN	4214.8	30	0	711.74	0.141			+	-1	KLMQMTAGR	9	55	534.2728271484375	NaN	0	534.2728271484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Oxidation (M)	_KLM(Oxidation (M))QM(Oxidation (M))TAGR_	REV__ENSG00000159147|ENST00000303071|DONSON;REV__ENST00000462566.1_1_21:34953586-34954315:-|nuORF	47.657333605630114	0.2228375344433429	4				NaN	NaN	0	NaN	3156	2563	5714
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5739	18.605	NaN	45262	30	0	6606	0.214	+			4271	ATGGLEGKMK	10	101	496.26588795521025	990.5172229772205	2	496.265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATGGLEGKMK_	AHNAK|p.I657Nfs*25|1|0.36|ENSG00000124942|chr11:62532447-62532448|-/T|frameshift_variant;AHNAK|p.K2311Rfs*11|1|0.33|ENSG00000124942|chr11:62527487-62527487|G/-|frameshift_variant;AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;AHNAK|p.L2124Ifs*37|1|0.04|ENSG00000124942|chr11:62528048-62528049|-/ATGCCTGATA|frameshift_variant;AHNAK|p.S1888Qfs*8|1|0.11|ENSG00000124942|chr11:62528755-62528756|-/G|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK	182.3913890336628	0.000997211271043608	4				NaN	NaN	0	NaN	3171	2566	5738
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5740	18.608	NaN	7233.7	30	0	780.64	0.106	+			48595	VTQSEIAQK	9	68	502.27480524261404	1002.5350575520281	2	502.27471923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTQSEIAQK_	ENSG00000197702|ENST00000334956|PARVA;ENST00000533345.5_1_11:12419899-12534890:+|nuORF	115.23196543181992	0.024086211614104236	4				NaN	NaN	0	NaN	3172	2566	5738
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5741	18.61	NaN	6840.7	30	0	911.31	0.106	+			14047	GSIAGASASPK	11	62	473.2538163064597	944.4930796797195	2	473.2535400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GSIAGASASPK_	ENSG00000096696|ENST00000379802|DSP;nc|ENSG00000096696|P15924-2|DSP;nc|ENSG00000096696|P15924-3|DSP	97.59673978297657	0.06767575942783079	4				NaN	NaN	0	NaN	3173	2566	5738
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5742	18.612	NaN	26617	30	0	2189.4	0.106	+			40816	SVEEGEKVVK	10	88	552.3010523775938	1102.5875518219875	2	552.3012084960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVEEGEKVVK_	ENSG00000133835|ENST00000510025|HSD17B4;ENST00000511186.5_1_5:118788168-118811542:+|nuORF;ENST00000515235.6_1_5:118788237-118827866:+|nuORF;HSD17B4|p.L703Ifs*15|1|0.06|ENSG00000133835|chr5:119536530-119536531|-/GAAAAATA|frameshift_variant;nc|ENSG00000133835|P51659-2|HSD17B4;nc|ENSG00000133835|P51659-3|HSD17B4	164.45504665044191	0.00544846538291036	4				NaN	NaN	0	NaN	3174	2566	5738
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5743	18.614	NaN	12003	30	0	2161.5	0.106	+			34406	RTSSIQPSFH	10	83	580.2966918945312	NaN	0	580.2966918945312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RTSSIQPSFH_	TMC5|p.R276H|1|0.36|ENSG00000103534|chr16:19444119-19444119|G/A|missense_variant	58.62960593111931	0.24546904353716886	4				NaN	NaN	0	NaN	3175	2566	5738
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5744	18.616	NaN	16463	30	0	2343.2	0.106			+	30898	QEKSRAKPQL	10	79	592.8415671120697	1183.6685812909393	2	592.8416137695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QEKSRAKPQL_	REV__ENSG00000171606|ENST00000617501|ZNF274;REV__nc|ENSG00000171606|Q96GC6-2|ZNF274;REV__nc|ENSG00000171606|Q96GC6-3|ZNF274	35.17822180527639	0.5925517082438457	4				NaN	NaN	0	NaN	3176	2566	5738
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5745	18.618	NaN	6759	30	0	1666.7	0.035			+	-1	CSKFKGGGHS	10	69	525.245421775146	NaN	0	525.2451782226562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))CSKFKGGGHS_	REV__ENST00000304979.7_1_1:43124098-43124146:+|nuORF	42.86426827375447	0.3507156137006061	4				NaN	NaN	0	NaN	3177	2566	5738
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5763	18.654	NaN	4364.9	30	0	2056.3	0.214	+			29006	NSPCPMMD	8	53	476.17264795493736	950.3307429766747	2	476.1724548339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_NSPC(Carbamidomethyl (C))PMMD_	CCDC168|p.A3265Vfs*21|1|0.06|ENSG00000175820|chr13:102740903-102740904|-/GAAGAAAAATATA|frameshift_variant;CCDC168|p.A4132Qfs*29|1|0.23|ENSG00000175820|chr13:102738304-102738304|T/-|frameshift_variant;CCDC168|p.F3005Lfs*18|2|0.31|ENSG00000175820|chr13:102741682-102741682|A/-|frameshift_variant;CCDC168|p.G4714Rfs*2|1|0.22|ENSG00000175820|chr13:102736557-102736558|-/T|frameshift_variant;CCDC168|p.G6141Lfs*25|1|0.03|ENSG00000175820|chr13:102732276-102732277|-/AGGAAAAATCACCAAACACTAG|frameshift_variant;CCDC168|p.I1655Nfs*8|1|0.07|ENSG00000175820|chr13:102745733-102745734|-/AACTTAAAACAAT|frameshift_variant;CCDC168|p.K5937Nfs*10|1|0.37|ENSG00000175820|chr13:102732886-102732886|T/-|frameshift_variant;CCDC168|p.K6236Nfs*3|1|0.42|ENSG00000175820|chr13:102731989-102731989|T/-|frameshift_variant;CCDC168|p.L3176Ifs*8|1|0.42|ENSG00000175820|chr13:102741171-102741172|-/T|frameshift_variant;CCDC168|p.L5048Ifs*6|1|0.12|ENSG00000175820|chr13:102735555-102735556|-/T|frameshift_variant;CCDC168|p.L5234*|1|0.12|ENSG00000175820|chr13:102735001-102735001|A/-|frameshift_variant;CCDC168|p.M1116Nfs*6|1|0.25|ENSG00000175820|chr13:102747350-102747351|-/T|frameshift_variant;CCDC168|p.M1116Wfs*8|1|0.14|ENSG00000175820|chr13:102747351-102747351|T/-|frameshift_variant;CCDC168|p.M5025Cfs*8|1|0.29|ENSG00000175820|chr13:102735624-102735624|T/-|frameshift_variant;CCDC168|p.N1192Tfs*3|1|0.1|ENSG00000175820|chr13:102747122-102747122|T/-|frameshift_variant;CCDC168|p.N2119Kfs*18|1|0.41|ENSG00000175820|chr13:102744340-102744341|-/T|frameshift_variant;CCDC168|p.T2792Dfs*27|1|0.25|ENSG00000175820|chr13:102742324-102742325|-/T|frameshift_variant;CCDC168|p.T4543Lfs*5|1|0.1|ENSG00000175820|chr13:102737070-102737070|T/-|frameshift_variant;ENSG00000175820|ENST00000322527|CCDC168	40.5726180659479	0.6527593143185008	4				NaN	NaN	0	NaN	3192	2569	5762
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5764	18.658	NaN	11610	30	0	2470.4	0.106				-1	 	0	76	545.2955141365985	544.2882376699985	1	545.2957763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3193	2569	5762
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5765	18.66	NaN	7721.5	30	0	1437.9	0.106	+			21440	KNCIIVSPDA	10	61	558.7897113635146	1115.564869793829	2	558.789794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_KNC(Carbamidomethyl (C))IIVSPDA_	ENSG00000101911|ENST00000380668|PRPS2;ENSG00000229937|ENST00000506618|PRPS1L1;nc|ENSG00000101911|P11908-2|PRPS2	56.72105179125745	0.3956618550748046	4				NaN	NaN	0	NaN	3194	2569	5762
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5766	18.662	NaN	1429.8	30	0	74.125	0.106	+			25811	LSCVAIAFGVL	11	51	364.8768005371094	NaN	0	364.8768005371094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSCVAIAFGVL_	L1PA3_dup1321|chr2:173527290-173533317:-|1.892281258594111|0.2637255971055219|2.84|482.0|174|1|anti-sense	38.753607047826485	0.39270760338352134	4				NaN	NaN	0	NaN	3195	2569	5762
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5767	18.663	NaN	7954.6	30	0	1781.1	0.106	+			34386	RTSEIYVHR	9	66	580.8120727539062	NaN	0	580.8120727539062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RTSEIYVHR_	ENSG00000089737|ENST00000621632|DDX24;ENST00000555762.1_1_14:94517539-94521656:-|nuORF;nc|ENSG00000089737|Q9GZR7-2|DDX24	56.632244143249146	0.1636824227100298	4				NaN	NaN	0	NaN	3196	2569	5762
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5768	18.665	NaN	2057.4	30	0	438.71	0.032	+			38549	SSEVSATT	8	46	391.1822651209093	780.3499773086186	2	391.18218994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSEVSATT_	ENSG00000149972|ENST00000524871|CNTN5;nc|ENSG00000149972|O94779-2|CNTN5	19.359975847455235	0.7988239741663654	4				NaN	NaN	0	NaN	3197	2569	5762
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5769	18.666	NaN	9234.1	30	0	1883	0.143			+	25702	LRLFFPCTVAS	11	53	627.340576171875	NaN	0	627.340576171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LRLFFPCTVAS_	REV__ENST00000497425.1_1_2:166736340-166740450:-|nuORF	26.69291269510374	0.4464570093767436	4				NaN	NaN	0	NaN	3198	2569	5762
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5787	18.704	NaN	10008	30	0	2925.7	0.214			+	49349	VVSPYSAPD	9	70	467.7277821809934	933.4410114287869	2	467.72747802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVSPYSAPD_	REV__CAD|p.N1541Mfs*15|1|0.33|ENSG00000084774|chr2:27237773-27237773|A/-|frameshift_variant;REV__CAD|p.Q1172Tfs*37|1|0.41|ENSG00000084774|chr2:27234113-27234114|-/C|frameshift_variant;REV__CAD|p.Q902Hfs*2|1|0.42|ENSG00000084774|chr2:27232507-27232508|AG/-|frameshift_variant;REV__ENSG00000084774|ENST00000264705|CAD	37.15910966729921	0.4535818937225704	4				NaN	NaN	0	NaN	3213	2572	5786
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5788	18.708	NaN	7390.9	30	0	880.2	0.106	+			15757	GVSQAMQQK	9	62	488.7476568887779	975.4807608443558	2	488.7473449707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GVSQAMQQK_	ENSG00000166398|ENST00000299505|GARRE1	96.0336014099291	0.047854655524928534	4				NaN	NaN	0	NaN	3214	2572	5786
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5789	18.71	NaN	6288.8	30	0	1220.9	0.106	+			35428	SASALFVQDH	10	64	537.7635498046875	NaN	0	537.7635498046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SASALFVQDH_	ENSG00000064933|ENST00000441310|PMS1;ENST00000421722.5_1_2:190656520-190720594:+|nuORF;nc|ENSG00000064933|P54277-2|PMS1;nc|ENSG00000064933|P54277-3|PMS1;nc|ENSG00000064933|P54277-4|PMS1	36.446750945000026	0.3805027428805705	4				NaN	NaN	0	NaN	3215	2572	5786
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5790	18.712	NaN	7195.9	30	0	769.06	0.106	+			30539	QAKLKELQA	9	83	514.807980554106	1027.601408175012	2	514.8074951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QAKLKELQA_	ENSG00000069424|ENST00000378083|KCNAB2;nc|ENSG00000069424|Q13303-2|KCNAB2;nc|ENSG00000069424|Q13303-4|KCNAB2;nc|ENSG00000069424|Q13303-5|KCNAB2;nc|ENSG00000069424|Q13303|KCNAB2	51.52775601994872	0.28504342437107444	4				NaN	NaN	0	NaN	3216	2572	5786
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5791	18.714	NaN	3906.9	30	0	619.91	0.106	+			12160	GAKKPKNKK	9	51	499.8272399902344	NaN	0	499.8272399902344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GAKKPKNKK_	CON__Q9TRI1	45.9519527083369	0.2345902329052062	4				NaN	NaN	0	NaN	3217	2572	5786
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5792	18.715	NaN	7102.6	30	0	1503.6	0.038	+			24843	LKAEKASQKVT	11	64	601.8587036132812	NaN	0	601.8587036132812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LKAEKASQKVT_	ENSG00000079819|ENST00000337057|EPB41L2;nc|ENSG00000079819|O43491-2|EPB41L2;nc|ENSG00000079819|O43491-3|EPB41L2;nc|ENSG00000079819|O43491-4|EPB41L2	26.749707702089633	0.4462038980881566	4				NaN	NaN	0	NaN	3218	2572	5786
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5793	18.716	NaN	2445.5	30	0	283.79	0.141			+	-1	TTAYCVSD	8	61	458.6892067918778	NaN	0	458.68927001953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_TTAYC(Carbamidomethyl (C))VSD_	REV__ENSG00000152104|ENST00000366956|PTPN14	33.51558372728122	1.7418937515398478	4				NaN	NaN	0	NaN	3219	2572	5786
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5811	18.755	NaN	1153300	30	0	326320	0.209	+			2995	ASFDKAKLK	9	161	336.53384563364364	1006.579707501131	3	336.5342102050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASFDKAKLK_	ENSG00000034510|ENST00000233143|TMSB10	47.657333605630114	0.33044192980041115	4				NaN	NaN	0	NaN	3234	2575	5810
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5812	18.758	NaN	15666	30	0	2879.6	0.106	+			39444	STEKIYIRK	9	72	569.3350219726562	NaN	0	569.3350219726562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STEKIYIRK_	ENSG00000120798|ENST00000333003|NR2C1;ENSG00000177463|ENST00000425241|NR2C2;ENST00000475707.5_1_3:15045421-15079667:+|nuORF;nc|ENSG00000120798|P13056-2|NR2C1;nc|ENSG00000120798|P13056-3|NR2C1;nc|ENSG00000177463|P49116-2|NR2C2;NR2C2|p.F563Lfs*10|1|0.4|ENSG00000177463|chr3:15042899-15042899|T/-|frameshift_variant	94.4091291819064	0.03270814107078442	4				NaN	NaN	0	NaN	3235	2575	5810
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5813	18.76	NaN	13644	30	0	2912.7	0.106	+			15442	GTYTIHAQK	9	71	509.76951365276534	NaN	0	509.769287109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTYTIHAQK_	ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;nc|ENSG00000185164|Q5JPE7-3|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2;NOMO1|p.P1102Hfs*42|1|0.36|ENSG00000103512|chr16:14886838-14886838|C/-|frameshift_variant	107.00750918261382	0.012399597248013027	4				NaN	NaN	0	NaN	3236	2575	5810
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5814	18.762	NaN	31296	30	0	7248.1	0.106	+			9803	EPCSPNVRF	9	67	553.2587465045978	1104.5029400759954	2	553.2583618164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_EPC(Carbamidomethyl (C))SPNVRF_	ENSG00000044524|ENST00000336596|EPHA3;EPHA3|p.E647Rfs*9|1|0.35|ENSG00000044524|chr3:89419248-89419248|A/-|frameshift_variant;EPHA3|p.M847Wfs*10|4|0.2|ENSG00000044524|chr3:89450213-89450213|C/-|frameshift_variant;nc|ENSG00000044524|P29320-2|EPHA3	51.33545320467046	0.2872990594074956	4				NaN	NaN	0	NaN	3237	2575	5810
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5815	18.764	NaN	8919.2	30	0	2428.7	0.106				-1	 	0	68	545.2955141365985	544.2882376699985	1	545.2945556640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3238	2575	5810
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5816	18.766	NaN	3373.3	30	0	997.28	0.106	+			50723	YEHHRESPC	9	42	579.2457885742188	NaN	0	579.2457885742188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YEHHRESPC_	ENST00000571392.1_1_16:72050863-72057137:+|nuORF;ENST00000573922.5_1_16:72046155-72057137:+|nuORF	24.20275056022122	0.35506675290109213	4				NaN	NaN	0	NaN	3239	2575	5810
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5817	18.767	NaN	32297	30	0	20290	0.035	+			19881	KEERTQLQ	8	58	516.2773322393684	1030.5401115455368	2	516.2766723632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KEERTQLQ_	ENSG00000121749|ENST00000485960|TBC1D15;nc|ENSG00000121749|Q8TC07-3|TBC1D15;nc|ENSG00000121749|Q8TC07|TBC1D15;TBC1D15|p.L440Ffs*8|1|0.12|ENSG00000121749|chr12:71907102-71907103|-/T|frameshift_variant	66.42927471994793	0.4381325844043345	4				NaN	NaN	0	NaN	3240	2575	5810
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5837	18.801	NaN	76769	30	0	33671	0.137	+			36513	SFDKAKLK	8	93	468.7796256747198	935.5446984162396	2	468.7791442871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SFDKAKLK_	CON__P21752;ENSG00000034510|ENST00000233143|TMSB10	139.97047562133406	0.25797680915057813	4				NaN	NaN	0	NaN	3257	2578	5836
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5848	18.827	NaN	14358	30	0	6352.2	0.214	+			51460	YVGAAKLK	8	69	425.26295963645015	848.5113663397003	2	425.2633056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YVGAAKLK_	ENSG00000100938|ENST00000399440|GMPR2;ENSG00000137198|ENST00000259727|GMPR;ENST00000543191.5_1_6:16258277-16295414:+|nuORF;ENST00000544145.1_1_6:16289789-16295414:+|nuORF;nc|ENSG00000100938|Q9P2T1-2|GMPR2;nc|ENSG00000100938|Q9P2T1-3|GMPR2	83.28718786952967	0.2977916691876266	4				NaN	NaN	0	NaN	3265	2581	5847
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5849	18.831	NaN	6595.7	30	0	682.93	0.106			+	29826	PKSFKPKAS	9	81	330.53079261905395	988.5705484573618	3	330.531005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PKSFKPKAS_	REV__ENSG00000153292|ENST00000371253|ADGRF1;REV__ENST00000477858.1_1_6:46967961-46969328:-|nuORF	25.57405402267927	0.5642445186134241	4				NaN	NaN	0	NaN	3266	2581	5847
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5850	18.833	NaN	7187.4	30	0	2007.8	0.106	+			2996	ASFDKAKLK	9	71	504.2983925833271	1006.5822322334542	2	504.2981262207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASFDKAKLK_	ENSG00000034510|ENST00000233143|TMSB10	110.11987700582712	0.028875675806141952	4				NaN	NaN	0	NaN	3267	2581	5847
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5851	18.835	NaN	2545.4	30	0	478.24	0.106			+	32243	QTIDELKK	8	69	487.7797546386719	NaN	0	487.7797546386719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QTIDELKK_	REV__tr|U7SNU9|U7SNU9_FUSNUAdenylatekinaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=adkPE=3SV=1	72.87924865735499	1.7418937515398478	4				NaN	NaN	0	NaN	3268	2581	5847
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5852	18.837	NaN	10627	30	0	5150.5	0.106	+			21143	KKTCGNKSSV	10	65	526.2805963613805	1050.546639789561	2	526.2805786132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KKTCGNKSSV_	ENSG00000160593|ENST00000356289|JAML;nc|ENSG00000160593|Q86YT9-2|JAML;nc|ENSG00000160593|Q86YT9-4|JAML	29.170058357718403	0.6416167986984785	4				NaN	NaN	0	NaN	3269	2581	5847
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5853	18.838	NaN	10838	30	0	4508.3	0.106				-1	VCPASCHGLK	10	65	536.2572517756555	1070.499950618111	2	536.7600708007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_VCPASC(Carbamidomethyl (C))HGLK_	nc|ENSG00000159398|Q6NT32-4|CES5A	35.61828744233558	0.588957954432594	4				NaN	NaN	0	NaN	3270	2581	5847
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5854	18.84	NaN	6283.9	30	0	2039.9	0.037	+			47096	VLLAATSPRR	10	53	361.8925569655033	1082.6558414967099	3	361.8927917480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VLLAATSPRR_	ENST00000439290.5_1_9:131833323-131833761:+|nuORF	30.317721548370564	0.6322445173429027	4				NaN	NaN	0	NaN	3271	2581	5847
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5872	18.876	NaN	18877	30	0	3726.4	0.214	+			4999	ATSAFQTQK	9	74	491.25365554189517	980.4927581505904	2	491.2529602050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSAFQTQK_	ENSG00000139687|ENST00000267163|RB1;RB1|p.V654Cfs*4|1|0.33|ENSG00000139687|chr13:48456343-48456343|A/-|frameshift_variant	164.45504665044191	0.003713414289755139	4				NaN	NaN	0	NaN	3286	2584	5871
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5873	18.88	NaN	5242.7	30	0	531.9	0.106	+			5085	ATSNFARVK	9	69	497.27718188867567	992.5398108441514	2	497.2772216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATSNFARVK_	DOCK8|p.E1615Dfs*7|1|0.05|ENSG00000107099|chr9:433933-433934|-/C|frameshift_variant;ENSG00000107099|ENST00000432829|DOCK8;nc|ENSG00000107099|Q8NF50-2|DOCK8;nc|ENSG00000107099|Q8NF50-3|DOCK8;nc|ENSG00000107099|Q8NF50-4|DOCK8	82.7504851949679	0.08565546331141553	4				NaN	NaN	0	NaN	3287	2584	5871
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5874	18.882	NaN	9086.3	30	0	1425.8	0.106	+			37011	SIQHPLIKK	9	76	532.3348073061892	NaN	0	532.3349609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SIQHPLIKK_	ENSG00000151835|ENST00000382292|SACS;nc|ENSG00000151835|Q9NZJ4-2|SACS;SACS|p.A1848Qfs*2|1|0.1|ENSG00000151835|chr13:23338334-23338334|C/-|frameshift_variant;SACS|p.I3485Lfs*10|1|0.24|ENSG00000151835|chr13:23333423-23333423|T/-|frameshift_variant;SACS|p.K2931Nfs*22|1|0.23|ENSG00000151835|chr13:23335083-23335083|T/-|frameshift_variant;SACS|p.L2871Ffs*29|1|0.26|ENSG00000151835|chr13:23335263-23335264|-/A|frameshift_variant;SACS|p.L3102*|1|0.33|ENSG00000151835|chr13:23334571-23334571|A/-|frameshift_variant;SACS|p.P2063Sfs*7|1|0.36|ENSG00000151835|chr13:23337689-23337690|-/A|frameshift_variant;SACS|p.S2058Ffs*2|1|0.3|ENSG00000151835|chr13:23337703-23337704|-/A|frameshift_variant;SACS|p.S2058Lfs*19|1|0.1|ENSG00000151835|chr13:23337704-23337704|A/-|frameshift_variant;SACS|p.S4423Ffs*42|1|0.18|ENSG00000151835|chr13:23330610-23330611|-/G|frameshift_variant	63.42647028704847	0.13470499157941143	4				NaN	NaN	0	NaN	3288	2584	5871
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5875	18.884	NaN	9254.5	30	0	2389.1	0.106			+	-1	MKAEQECMK	9	58	557.2406008407244	1112.4666487482486	2	557.2401123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_MKAEQECM(Oxidation (M))K_	REV__ENST00000567652.1_3_15:28798864-28806522:+|nuORF;REV__nc|ENSG00000227717|P0DX01|GOLGA6L25;REV__nc|ENSG00000237850|P0DX00|GOLGA6L24	30.503639358989545	0.5181749237905803	4				NaN	NaN	0	NaN	3289	2584	5871
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5876	18.886	NaN	6685.5	30	0	1296.7	0.106	+			50067	WFPDMIRY	8	53	564.2714701801402	1126.5283874270804	2	564.2718505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_WFPDMIRY_	ENSG00000185518|ENST00000394232|SV2B;nc|ENSG00000185518|Q7L1I2-2|SV2B;SV2B|p.G586Wfs*4|2|0.27|ENSG00000185518|chr15:91289561-91289562|-/T|frameshift_variant	23.04248740728303	0.7814162927298575	4				NaN	NaN	0	NaN	3290	2584	5871
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5877	18.887	NaN	2814.2	30	0	401.6	0.035	+			31185	QGNVKKSKQ	9	61	508.79646197322427	1015.5783710132486	2	508.79608154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QGNVKKSKQ_	ENSG00000112742|ENST00000369798|TTK;ENST00000430061.2_1_6:80715671-80721208:+|nuORF;nc|ENSG00000112742|P33981-2|TTK;TTK|p.K192Sfs*18|6|0.28|ENSG00000112742|chr6:80010913-80010913|A/-|frameshift_variant;TTK|p.L364Pfs*8|1|0.04|ENSG00000112742|chr6:80014568-80014569|-/CCATAAATAGTAG|frameshift_variant	52.936696900407355	0.27249468807391813	4				NaN	NaN	0	NaN	3291	2584	5871
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5878	18.888	NaN	8169.1	30	0	2045.4	0.142			+	2300	AMDDPNCNFI	10	47	578.2247314453125	NaN	0	578.2247314453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_AM(Oxidation (M))DDPNCNFI_	REV__ENSG00000005156|ENST00000378526|LIG3;REV__ENST00000586435.1_1_17:33316537-33318256:+|nuORF;REV__LIG3|p.A685Pfs*23|1|0.18|ENSG00000005156|chr17:34998663-34998663|G/-|frameshift_variant;REV__nc|ENSG00000005156|P49916-2|LIG3;REV__nc|ENSG00000005156|P49916-3|LIG3;REV__nc|ENSG00000005156|P49916-4|LIG3	44.116797842482775	0.3427969396372342	4				NaN	NaN	0	NaN	3292	2584	5871
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5896	18.927	NaN	51933	30	0	4550.7	0.214	+			4874	ATQAVFQKR	9	103	524.7988218705735	1047.583090807947	2	524.798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATQAVFQKR_	ENSG00000100949|ENST00000216840|RABGGTA;ENST00000558534.5_1_14:24738716-24740321:-|nuORF;ENST00000560998.5_1_14:24737570-24740321:-|nuORF;RABGGTA|p.P160Lfs*5|1|0.17|ENSG00000100949|chr14:24269643-24269643|G/-|frameshift_variant;RABGGTA|p.Q194Sfs*43|1|0.31|ENSG00000100949|chr14:24269542-24269542|G/-|frameshift_variant	191.44940797552337	0.00014666235100428603	4				NaN	NaN	0	NaN	3307	2587	5895
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5897	18.931	NaN	3806.9	30	0	1013	0.106			+	13440	GLHLRKKD	8	70	322.86629984976474	NaN	0	322.8587341308594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GLHLRKKD_	REV__ENST00000354193.4_1_11:22848847-22851305:-|nuORF;REV__ENST00000530199.5_1_11:22848844-22850840:-|nuORF;REV__ENST00000533774.5_1_11:22848847-22850842:-|nuORF	29.14955571784316	1.7418937515398478	4				NaN	NaN	0	NaN	3308	2587	5895
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5898	18.933	NaN	4500.9	30	0	867.21	0.106				-1	 	0	62	325.21701195551543	648.4194709778309	2	325.21710205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3309	2587	5895
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5899	18.935	NaN	8050.8	30	0	2352.2	0.106			+	29465	PCPSLPSPSVQ	11	59	556.2756087256572	1110.5366645181143	2	556.2767944335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PCPSLPSPSVQ_	REV__ENST00000503120.5_1_5:138725194-138725560:-|nuORF	26.749707702089633	0.7092085788826945	4				NaN	NaN	0	NaN	3310	2587	5895
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5900	18.937	NaN	6744.3	30	0	832.22	0.106			+	19263	KAELASEK	8	76	438.24497036323146	874.4753877932629	2	438.2449951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KAELASEK_	REV__ENSG00000113971|ENST00000337331|NPHP3;REV__nc|ENSG00000113971|Q7Z494-3|NPHP3;REV__nc|ENSG00000113971|Q7Z494-5|NPHP3;REV__nc|ENSG00000113971|Q7Z494-6|NPHP3	66.42927471994793	0.4381325844043345	4				NaN	NaN	0	NaN	3311	2587	5895
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5901	18.938	NaN	4708	30	0	2037.6	0.036			+	29029	NSTAWGVVTL	10	66	349.8536725753546	1046.539188326264	3	349.853759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NSTAWGVVTL_	REV__ENSG00000121578|ENST00000393765|B4GALT4	24.519189625965996	0.6795976720565101	4				NaN	NaN	0	NaN	3312	2587	5895
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5902	18.939	NaN	4219.4	30	0	1904.5	0.139	+			22141	KSQKEITK	8	54	481.2872009277344	NaN	0	481.2872009277344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KSQKEITK_	tr|U7T6X0|U7T6X0_FUSNUNodTfamilyeffluxtransporter,outermembranefactor(OMF)lipoproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00036PE=3SV=1	47.657333605630114	1.7418937515398478	4				NaN	NaN	0	NaN	3313	2587	5895
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5920	18.977	NaN	4904.2	30	0	1088.6	0.214	+			3864	ATAMVTEQK	9	62	489.7499425481421	977.4853321630842	2	489.7496337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATAMVTEQK_	ENSG00000166398|ENST00000299505|GARRE1	96.0336014099291	0.047854655524928534	4				NaN	NaN	0	NaN	3328	2590	5919
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5921	18.981	NaN	12230	30	0	1679.8	0.106			+	39699	STILVTHEFQA	11	79	623.325439453125	NaN	0	623.325439453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STILVTHEFQA_	REV__ENSG00000172878|ENST00000315796|METAP1D;REV__ENST00000488581.5_1_2:172944999-172945131:+|nuORF	66.9202029811203	0.16638076873265448	4				NaN	NaN	0	NaN	3329	2590	5919
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5922	18.983	NaN	7208.4	30	0	3327.3	0.106	+			41266	SVLIQRLGK	9	74	338.5534973816562	1012.6386627451686	3	338.5536193847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVLIQRLGK_	CNTNAP4|p.F657Sfs*42|1|0.3|ENSG00000152910|chr16:76489769-76489769|T/-|frameshift_variant;CNTNAP4|p.N1023Tfs*13|1|0.46|ENSG00000152910|chr16:76538184-76538184|A/-|frameshift_variant;CNTNAP4|p.Q397Nfs*18|1|0.17|ENSG00000152910|chr16:76452621-76452621|T/-|frameshift_variant;ENSG00000152910|ENST00000611870|CNTNAP4;nc|ENSG00000152910|Q9C0A0-2|CNTNAP4	16.473147378115264	0.6112419832031293	4				NaN	NaN	0	NaN	3330	2590	5919
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5923	18.985	NaN	7486.5	30	0	1329.8	0.106			+	-1	QELLELATCK	10	65	602.8157999982199	1203.6170470632396	2	602.816162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_QELLELATC(Carbamidomethyl (C))K_	REV__ENSG00000108384|ENST00000337432|RAD51C;REV__ENST00000475762.5_1_17:56772326-56801433:+|nuORF;REV__ENST00000487921.5_1_17:56769962-56783250:+|nuORF;REV__nc|ENSG00000108384|O43502-2|RAD51C;REV__RAD51C|p.S105*|1|0.55|ENSG00000108384|chr17:58695099-58695099|C/-|frameshift_variant	37.50817390946774	0.5721060100277453	4				NaN	NaN	0	NaN	3331	2590	5919
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5924	18.987	NaN	12581	30	0	1692.8	0.106	+			39681	STIGPEGVHQK	11	78	576.8047899552486	1151.595026977297	2	576.8045654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STIGPEGVHQK_	nc|ENSG00000157654|Q9Y2D5-8|PALM2AKAP2;nc|ENSG00000157654|Q9Y2D5-9|PALM2AKAP2	98.75417337143367	0.06326268080394254	4				NaN	NaN	0	NaN	3332	2590	5919
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5925	18.989	NaN	21869	30	0	3446	0.036	+			34556	RVLEAIQKK	9	77	542.8456714512131	1083.676789969226	2	542.845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RVLEAIQKK_	ENSG00000169375|ENST00000394947|SIN3A;SIN3A|p.G659Afs*26|1|0.14|ENSG00000169375|chr15:75396375-75396375|C/-|frameshift_variant	128.3478880297481	0.016146157547210084	4				NaN	NaN	0	NaN	3333	2590	5919
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5926	18.989	NaN	2984.5	30	0	622.76	0.14				-1	SDNDICSQ	8	60	469.68021227084483	937.3458716084897	2	469.6797180175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_SDNDIC(Carbamidomethyl (C))SQ_	ENSG00000144161|ENST00000409573|ZC3H8	30.317721548370564	0.7252424349988982	4				NaN	NaN	0	NaN	3334	2590	5919
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5944	19.027	NaN	54296	30	0	11361	0.214	+			40778	SVDPKNYPK	9	94	524.2771991704363	1046.5398454076726	2	524.2772827148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVDPKNYPK_	ENSG00000125538|ENST00000263341|IL1B;ENST00000491056.5_1_2:113587940-113590763:-|nuORF	104.0567914643314	0.03506238181059741	4				NaN	NaN	0	NaN	3349	2593	5943
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5945	19.031	NaN	17492	30	0	1768.6	0.106			+	20322	KEQLHTKE	8	76	506.77484881512527	1011.5351446970506	2	506.7746887207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEQLHTKE_	REV__ENSG00000100503|ENST00000530997|NIN;REV__nc|ENSG00000100503|Q8N4C6-10|NIN;REV__nc|ENSG00000100503|Q8N4C6-11|NIN;REV__nc|ENSG00000100503|Q8N4C6-2|NIN;REV__nc|ENSG00000100503|Q8N4C6-4|NIN;REV__nc|ENSG00000100503|Q8N4C6-5|NIN;REV__nc|ENSG00000100503|Q8N4C6-6|NIN;REV__nc|ENSG00000100503|Q8N4C6-9|NIN;REV__nc|ENSG00000100503|Q8N4C6|NIN;REV__NIN|p.E895Cfs*10|1|0.26|ENSG00000100503|chr14:50758344-50758347|TCTC/-|frameshift_variant;REV__NIN|p.K1233Rfs*3|1|0.45|ENSG00000100503|chr14:50757332-50757332|T/-|frameshift_variant;REV__NIN|p.N1391Kfs*8|1|0.03|ENSG00000100503|chr14:50756857-50756858|-/AGGAAAACAC|frameshift_variant	66.42927471994793	0.4381325844043345	4				NaN	NaN	0	NaN	3350	2593	5943
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5946	19.033	NaN	27593	30	0	12429	0.106				-1	 	0	50	373.7132210024188	745.4118890716376	2	373.71331787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3351	2593	5943
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5947	19.035	NaN	33758	30	0	6678.3	0.106				-1	 	0	79	518.7512935864339	1035.4880342396677	2	518.75146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3352	2593	5943
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5948	19.037	NaN	51224	30	0	27538	0.106	+			32507	QVQEGTKVLK	10	82	565.3326553994448	1128.6507578656895	2	565.332763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QVQEGTKVLK_	CKAP2|p.K606Rfs*14|3|0.38|ENSG00000136108|chr13:52474899-52474899|A/-|frameshift_variant;CKAP2|p.R384Gfs*6|1|0.18|ENSG00000136108|chr13:52462405-52462405|A/-|frameshift_variant;CKAP2|p.T295Qfs*14|1|0.12|ENSG00000136108|chr13:52461702-52461702|A/-|frameshift_variant;CKAP2|p.T579Pfs*11|1|0.07|ENSG00000136108|chr13:52474011-52474011|A/-|frameshift_variant;ENSG00000136108|ENST00000258607|CKAP2;nc|ENSG00000136108|Q8WWK9-4|CKAP2;nc|ENSG00000136108|Q8WWK9-6|CKAP2;nc|ENSG00000136108|Q8WWK9|CKAP2	153.1020116777495	0.007944751224360695	4				NaN	NaN	0	NaN	3353	2593	5943
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5949	19.038	NaN	8531.1	30	0	3735.4	0.031	+			32727	RAPAGGSL	8	77	364.70596226082944	727.3973715884589	2	364.7060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RAPAGGSL_	ENSG00000041802|ENST00000265245|LSG1	82.30502934623384	0.30436709589983096	4				NaN	NaN	0	NaN	3354	2593	5943
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5950	19.039	NaN	11323	30	0	2321.3	0.142			+	-1	EQCCECYGK	9	53	588.7094587739717	NaN	0	588.3265991210938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C)	_EQC(Carbamidomethyl (C))C(Carbamidomethyl (C))ECYGK_	REV__ENSG00000161692|ENST00000315005|DBF4B;REV__ENST00000527862.1_1_17:42811411-42826726:+|nuORF;REV__nc|ENSG00000161692|Q8NFT6-2|DBF4B;REV__nc|ENSG00000161692|Q8NFT6-3|DBF4B	19.1035232394073	0.3723251548669699	4				NaN	NaN	0	NaN	3355	2593	5943
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5968	19.076	NaN	14651	30	0	3376.6	0.214	+			8721	EEEGTPRDQ	9	62	530.7302911246452	1059.4460293160903	2	530.7301635742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EEEGTPRDQ_	ENSG00000005844|ENST00000356798|ITGAL;ITGAL|p.D890Tfs*9|3|0.12|ENSG00000005844|chr16:30510924-30510924|G/-|frameshift_variant;ITGAL|p.P825Rfs*11|2|0.31|ENSG00000005844|chr16:30506817-30506817|C/-|frameshift_variant;nc|ENSG00000005844|P20701-2|ITGAL;nc|ENSG00000005844|P20701-3|ITGAL	45.9519527083369	0.35044536499095585	4				NaN	NaN	0	NaN	3370	2596	5967
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5969	19.079	NaN	14789	30	0	6293.1	0.106				-1	RRRCPSPG	8	61	493.2589937696967	984.5034346061934	2	493.2587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_RRRC(Carbamidomethyl (C))PSPG_	ENST00000393881.7_1_17:40172139-40173590:+|nuORF;ENST00000462043.6_1_17:40172139-40175723:+|nuORF;ENST00000587028.1_1_17:40172139-40173690:+|nuORF	31.954861631926434	0.7126016770032289	4				NaN	NaN	0	NaN	3371	2596	5967
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5970	19.082	NaN	55206	30	0	13098	0.106	+			41016	SVGSVITKK	9	87	459.78481614566124	917.5550793581225	2	459.78448486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVGSVITKK_	ENSG00000076554|ENST00000518937|TPD52;ENST00000517445.5_1_8:80962678-80964851:-|nuORF;ENST00000521354.5_1_8:80950353-81083761:-|nuORF;ENST00000522364.5_1_8:80963727-80992703:-|nuORF;nc|ENSG00000076554|P55327-2|TPD52;nc|ENSG00000076554|P55327-3|TPD52;nc|ENSG00000076554|P55327-5|TPD52;nc|ENSG00000076554|P55327-6|TPD52;nc|ENSG00000076554|P55327-7|TPD52;nc|ENSG00000076554|P55327|TPD52	195.04605151776784	5.427472092243166E-05	4				NaN	NaN	0	NaN	3372	2596	5967
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5971	19.083	NaN	10053	30	0	2560.5	0.106			+	28906	NQPVEPYPGA	10	67	536.2572517756555	1070.499950618111	2	536.2565307617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NQPVEPYPGA_	REV__ENST00000269228.9_1_18:21166731-21166848:-|nuORF	67.49366992349736	0.29779660154124327	4				NaN	NaN	0	NaN	3373	2596	5967
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5972	19.085	NaN	27071	30	0	3339.8	0.106	+			35556	SAVSTRVYK	9	82	505.7857135634146	1009.5568741936293	2	505.7851867675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SAVSTRVYK_	ENST00000589805.1_1_17:42275437-42276541:-|nuORF;ENST00000590169.5_1_17:42275437-42275799:-|nuORF	106.68306549817024	0.032382560583716295	4				NaN	NaN	0	NaN	3374	2596	5967
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5973	19.087	NaN	5714.6	30	0	1066.3	0.035	+			13844	GQTNIHLSK	9	65	499.2754622666915	996.536371600183	2	499.27471923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GQTNIHLSK_	ENSG00000162909|ENST00000295006|CAPN2;ENST00000474026.5_1_1:223946905-223957668:+|nuORF;ENST00000487223.5_1_1:223946905-223962556:+|nuORF;nc|ENSG00000162909|P17655-2|CAPN2	48.601550744091256	0.3193666407755445	4				NaN	NaN	0	NaN	3375	2596	5967
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5974	19.088	NaN	6410.8	30	0	1986.8	0.139	+			19521	KAVNPGRSL	9	63	471.2802486888376	940.5459444444753	2	471.27960205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KAVNPGRSL_	ENSG00000103429|ENST00000261658|BFAR;nc|ENSG00000103429|Q9NZS9-2|BFAR	51.19269402634007	0.2889735674168909	4				NaN	NaN	0	NaN	3376	2596	5967
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5992	19.125	NaN	24113	30	0	5582.1	0.214	+			20488	KEYQKAIK	8	99	336.53384563364364	1006.579707501131	3	336.5342712402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEYQKAIK_	tr|U7SVZ1|U7SVZ1_FUSNUHTHhxlR-typedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01394PE=4SV=1	23.04248740728303	0.7814162927298575	4				NaN	NaN	0	NaN	3391	2599	5991
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5993	19.129	NaN	29884	30	0	2616	0.106			+	-1	WCGQSVQLHPW	11	96	699.3253023489391	1396.636051764678	2	699.3241577148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_WC(Carbamidomethyl (C))GQSVQLHPW_	REV__ENST00000484014.5_1_1:153748462-153751189:+|nuORF	31.529811441608018	0.6590691889962369	4				NaN	NaN	0	NaN	3392	2599	5991
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5994	19.131	NaN	8704.4	30	0	3806	0.106				-1	CTPKRLAP	8	63	471.7639312342213	941.5133095352426	2	471.7635192871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_C(Carbamidomethyl (C))TPKRLAP_	BDKRB1|p.S334R|1|0.04|ENSG00000100739|chr14:96264684-96264684|T/G|missense_variant	31.954861631926434	0.7126016770032289	4				NaN	NaN	0	NaN	3393	2599	5991
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5995	19.133	NaN	15403	30	0	1623.4	0.106	+			4456	ATINGGLRR	9	74	479.28306281770836	956.5515727022167	2	479.2829895019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATINGGLRR_	ENSG00000136059|ENST00000383759|VILL;ENST00000486616.5_1_3:38047918-38048543:+|nuORF;nc|ENSG00000136059|O15195-2|VILL	99.37495909608758	0.03983967222258828	4				NaN	NaN	0	NaN	3394	2599	5991
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5996	19.134	NaN	8448.6	30	0	883.5	0.106				-1	 	0	65	463.7873981610282	925.5602433888564	2	463.78692626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3395	2599	5991
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5997	19.136	NaN	2207.2	30	0	361.48	0.032			+	33566	RLGLGALK	8	47	414.2763599116622	826.5381668901244	2	414.2765808105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RLGLGALK_	REV__SRCAP|p.K2179Rfs*128|1|0.2|ENSG00000080603|chr16:30733930-30733930|A/-|frameshift_variant	40.5726180659479	0.6527593143185008	4				NaN	NaN	0	NaN	3396	2599	5991
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	5998	19.137	NaN	13439	30	0	1847.4	0.146			+	37855	SNNYLQPFEMY	11	77	711.3037109375	NaN	0	711.3037109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_SNNYLQPFEM(Oxidation (M))Y_	REV__ENSG00000006007|ENST00000353258|GDE1	40.05817265558897	0.3867246477658885	4				NaN	NaN	0	NaN	3397	2599	5991
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6016	19.174	NaN	18644	30	0	3423.1	0.214	+			14558	GTFGKALRR	9	85	503.30122540870934	1004.5878978842187	2	503.3009948730469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTFGKALRR_	ENSG00000139263|ENST00000320743|LRIG3;ENST00000433272.6_1_12:59266356-59274151:-|nuORF;nc|ENSG00000139263|Q6UXM1-2|LRIG3	60.11826168202944	0.21262886028301267	4				NaN	NaN	0	NaN	3412	2602	6015
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6017	19.177	NaN	14644	30	0	2958.4	0.106	+			38849	SSNLPVNNK	9	74	486.7591872456936	971.5038215581873	2	486.7587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSNLPVNNK_	ENSG00000135974|ENST00000258457|C2orf49	101.25262130126117	0.03792372629710479	4				NaN	NaN	0	NaN	3413	2602	6015
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6018	19.179	NaN	5576.4	30	0	781.2	0.106	+			12458	GEDGSGKTTL	10	71	482.732743996729	963.4509350602581	2	482.7322082519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEDGSGKTTL_	ENSG00000135720|ENST00000258198|DYNC1LI2;nc|ENSG00000135720|O43237-2|DYNC1LI2	89.02883481214508	0.13663399911061233	4				NaN	NaN	0	NaN	3414	2602	6015
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6019	19.181	NaN	7145.4	30	0	1270.5	0.106	+			39822	STLHHVLQR	9	66	545.8095688579346	NaN	0	545.8094482421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STLHHVLQR_	ENSG00000160209|ENST00000291565|PDXK;ENST00000398078.7_1_21:45161468-45175941:+|nuORF;ENST00000461123.1_1_21:45175398-45175941:+|nuORF;ENST00000468392.5_1_21:45165928-45175941:+|nuORF;nc|ENSG00000160209|O00764-2|PDXK;nc|ENSG00000160209|O00764-3|PDXK	54.776311868738084	0.17377682019723872	4				NaN	NaN	0	NaN	3415	2602	6015
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6020	19.183	NaN	10119	30	0	2049	0.106	+			32930	REAEQRRAYL	10	59	646.3466629646969	NaN	0	646.346923828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_REAEQRRAYL_	ENSG00000234745|ENST00000412585|HLA-B;ENST00000474381.1_1_6:31323854-31324663:-|nuORF;HLA-B|p.H215Tfs*11|1|0.35|ENSG00000234745|chr6:31355569-31355569|G/-|frameshift_variant;HLA-B|p.P209Qfs*5|6|0.16|ENSG00000234745|chr6:31355586-31355586|G/-|frameshift_variant;HLA-B|p.V306Afs*13|1|0.49|ENSG00000234745|chr6:31355202-31355202|A/-|frameshift_variant;HLA-B|p.V312Cfs*22|1|0.28|ENSG00000234745|chr6:31355185-31355186|-/A|frameshift_variant	26.749707702089633	0.4123430354295107	4				NaN	NaN	0	NaN	3416	2602	6015
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6021	19.185	NaN	7368.4	30	0	1664.6	0.036	+			48489	VTMKQICKK	9	59	539.8091511132208	1077.6037492932414	2	539.8102416992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTMKQICKK_	DEK|p.E372Sfs*2|1|0.2|ENSG00000124795|chr6:18226177-18226177|T/-|frameshift_variant;ENSG00000124795|ENST00000652689|DEK;nc|ENSG00000124795|P35659-2|DEK	74.1650062923329	0.12277912660386392	4				NaN	NaN	0	NaN	3417	2602	6015
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6022	19.185	NaN	2328	30	0	517.56	0.14	+			6309	AVSYVRVVT	9	48	497.2896728515625	NaN	0	497.2896728515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AVSYVRVVT_	ENSG00000275395|ENST00000616721|FCGBP;ENSG00000275395|ENST00000616721|FCGBP;FCGBP-ACSS2|1|fusion;FCGBP-ACSS2|1|fusion;nc|ENSG00000275395|Q9Y6R7|FCGBP;nc|ENSG00000275395|Q9Y6R7|FCGBP;nc|ENSG00000275395|Q9Y6R7|FCGBP	32.81241826257853	0.3119040447479903	4				NaN	NaN	0	NaN	3418	2602	6015
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6040	19.224	NaN	17617	30	0	2353	0.214	+			32907	RDTLAKRL	8	89	324.86959560775085	971.5869574234525	3	324.86981201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RDTLAKRL_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	40.05817265558897	0.6559515544096944	4				NaN	NaN	0	NaN	3433	2605	6039
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6041	19.228	NaN	9671.5	30	0	1684.3	0.106	+			43143	TESNHDTAL	9	67	494.2226291332608	986.4307053333216	2	494.2223815917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TESNHDTAL_	ANKRD17|p.L2249Yfs*84|1|0.34|ENSG00000132466|chr4:73090884-73090884|G/-|frameshift_variant;ENSG00000131503|ENST00000360839|ANKHD1;ENSG00000132466|ENST00000358602|ANKRD17;ENST00000506930.2_1_5:139884419-139889237:+|nuORF;ENST00000514252.1_1_4:73978989-74017230:-|nuORF;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1;nc|ENSG00000132466|O75179-2|ANKRD17;nc|ENSG00000132466|O75179-3|ANKRD17;nc|ENSG00000132466|O75179-6|ANKRD17;nc|ENSG00000132466|O75179-7|ANKRD17	75.04331003522576	0.118981335847003	4				NaN	NaN	0	NaN	3434	2605	6039
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6042	19.23	NaN	4351.2	30	0	732.62	0.106				-1	 	0	63	505.08665822109833	NaN	0	505.2872314453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3435	2605	6039
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6043	19.231	NaN	23923	30	0	5819.8	0.106	+			41557	SVQENIQQK	9	73	537.2829014437297	1072.5512499542592	2	537.2833251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVQENIQQK_	ENSG00000138160|ENST00000260731|KIF11	172.24860141594272	0.002383092361811508	4				NaN	NaN	0	NaN	3436	2605	6039
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6044	19.233	NaN	10597	30	0	1700.9	0.106			+	25880	LSGAANFTTRK	11	63	583.3201408001328	1164.6257286670655	2	583.3199462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSGAANFTTRK_	REV__sp|F5HET4|U131A_HCMVMProteinUL131AOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL131APE=1SV=1	35.17822180527639	0.6208003396870814	4				NaN	NaN	0	NaN	3437	2605	6039
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6045	19.235	NaN	4530.3	30	0	1645.1	0.036	+			18156	ILPIRAAFM	9	64	344.5412976381374	NaN	0	344.5413818359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ILPIRAAFM_	ENSG00000254656|ENST00000649591|RTL1;RTL1|p.Q1207Rfs*77|4|0.14|ENSG00000254656|chr14:100881170-100881170|G/-|frameshift_variant	20.94693142431847	0.3660861156085067	4				NaN	NaN	0	NaN	3438	2605	6039
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6046	19.236	NaN	4006.5	30	0	799.61	0.14			+	-1	FMMVWVAP	8	47	498.7383175335177	995.4620821338355	2	498.738037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_FM(Oxidation (M))MVWVAP_	REV__ENSG00000105464|ENST00000263269|GRIN2D;REV__ENSG00000161509|ENST00000293190|GRIN2C;REV__ENST00000584176.1_1_17:72843434-72846906:-|nuORF	24.504012794735996	0.7701314986472447	4				NaN	NaN	0	NaN	3439	2605	6039
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6064	19.274	NaN	4947.9	30	0	643.72	0.214	+			5686	AVEGGMKCVK	10	61	511.2620847644337	1020.5096165956675	2	511.2621154785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVEGGMKCVK_	CD63|p.A47Lfs*37|1|0.14|ENSG00000135404|chr12:55727267-55727267|C/-|frameshift_variant;ENSG00000135404|ENST00000257857|CD63;nc|ENSG00000135404|P08962-2|CD63	82.7504851949679	0.1731497355276012	4				NaN	NaN	0	NaN	3454	2608	6063
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6065	19.278	NaN	7536	30	0	2360.4	0.106	+			16575	HFTKLAVEAV	10	78	557.8167140115073	1113.6188750898145	2	557.8165893554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HFTKLAVEAV_	CCT2|p.L188F|1|0.19|ENSG00000166226|chr12:69589600-69589600|C/T|missense_variant;ENSG00000166226|ENST00000299300|CCT2;ENST00000551620.5_1_12:69979244-69983508:+|nuORF;nc|ENSG00000166226|P78371-2|CCT2	26.69291269510374	0.6618461711292317	4				NaN	NaN	0	NaN	3455	2608	6063
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6066	19.28	NaN	5901.6	30	0	1154.2	0.106	+			9411	EKHSMSNKH	9	69	549.2623255159664	1096.5100980987327	2	549.2622680664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EKHSMSNKH_	ENSG00000133121|ENST00000336934|STARD13;nc|ENSG00000133121|Q9Y3M8-2|STARD13;nc|ENSG00000133121|Q9Y3M8-3|STARD13;nc|ENSG00000133121|Q9Y3M8-4|STARD13;nc|ENSG00000133121|Q9Y3M8-5|STARD13;STARD13|p.S964Qfs*4|1|0.28|ENSG00000133121|chr13:33110031-33110031|G/-|frameshift_variant	39.252832667884924	0.4290233611298554	4				NaN	NaN	0	NaN	3456	2608	6063
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6067	19.281	NaN	7352.8	30	0	1176.6	0.106	+			48492	VTMPATETKK	10	66	553.3002618204481	1104.585970707696	2	553.3004150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTMPATETKK_	ENSG00000102316|ENST00000375068|MAGED2;nc|ENSG00000102316|Q9UNF1-2|MAGED2	76.16968421966216	0.22691431239609447	4				NaN	NaN	0	NaN	3457	2608	6063
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6068	19.283	NaN	16181	30	0	2032.7	0.106	+			46930	VIYEKTIRK	9	75	575.3534848832832	1148.6924168333662	2	575.3536987304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VIYEKTIRK_	ENSG00000124429|ENST00000262753|POF1B;nc|ENSG00000124429|Q8WVV4-1|POF1B;nc|ENSG00000124429|Q8WVV4-3|POF1B	98.58198989935565	0.04066992115528678	4				NaN	NaN	0	NaN	3458	2608	6063
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6069	19.285	NaN	3765.1	30	0	953.8	0.036	+			35660	SDACKIYKQ	9	58	528.263671875	NaN	0	528.263671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SDACKIYKQ_	ENSG00000118454|ENST00000370944|ANKRD13C;ENST00000490846.5_1_1:70758067-70779428:-|nuORF;ENST00000498735.1_1_1:70771606-70781164:-|nuORF;nc|ENSG00000118454|Q8N6S4-2|ANKRD13C	31.529811441608018	0.3183796599642538	4				NaN	NaN	0	NaN	3459	2608	6063
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6070	19.286	NaN	5520.8	30	0	965.16	0.142	+			9446	EKLLCFLVLT	10	65	589.8444213867188	NaN	0	589.8444213867188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EKLLCFLVLT_	ENSG00000132693|ENST00000255030|CRP;nc|ENSG00000132693|P02741-2|CRP	36.446750945000026	0.3805027428805705	4				NaN	NaN	0	NaN	3460	2608	6063
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6089	19.324	NaN	53368	30	0	12850	0.214			+	-1	QEGECTAQ	8	92	461.68223157802566	921.3499102228513	2	461.6823425292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_QEGEC(Carbamidomethyl (C))TAQ_	REV__ENST00000438378.2_1_2:132278647-132279013:+|nuORF	46.45678178249821	0.6162468623830999	4				NaN	NaN	0	NaN	3476	2611	6088
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6090	19.327	NaN	19965	30	0	2019.4	0.106	+			14432	GTASLAQVHK	10	87	506.28253782119646	NaN	0	506.2824401855469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTASLAQVHK_	ADCK1|p.Q416Pfs*27|1|0.38|ENSG00000063761|chr14:77931552-77931553|-/C|frameshift_variant;ENSG00000063761|ENST00000238561|ADCK1;nc|ENSG00000063761|Q86TW2-3|ADCK1;nc|ENSG00000063761|Q86TW2|ADCK1	159.27591364854348	1.8261056110516478E-05	4				NaN	NaN	0	NaN	3477	2611	6088
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6091	19.329	NaN	2716.8	30	0	480.83	0.106	+			51088	YLRGFIIGL	9	66	351.2159784082827	NaN	0	350.8815612792969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YLRGFIIGL_	ENST00000330212.7_1_3:113679835-113679949:+|nuORF	27.882242232435846	0.3367954786602879	4				NaN	NaN	0	NaN	3478	2611	6088
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6092	19.331	NaN	3295.4	30	0	780.86	0.106			+	-1	EGMLVPSTI	9	47	481.7482430731461	NaN	0	481.7485046386719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_EGM(Oxidation (M))LVPSTI_	REV__ARHGEF12|p.G1290Afs*71|1|0.09|ENSG00000196914|chr11:120480061-120480062|-/CTGCAAGAATTAAATTA|frameshift_variant;REV__ENSG00000196914|ENST00000397843|ARHGEF12;REV__ENST00000529970.5_1_11:120278459-120348246:+|nuORF;REV__nc|ENSG00000196914|Q9NZN5-2|ARHGEF12	29.14955571784316	0.3303970763161698	4				NaN	NaN	0	NaN	3479	2611	6088
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6093	19.333	NaN	2764.4	30	0	894.27	0.106				-1	 	0	55	347.19976743349395	346.19249096689396	1	347.1853332519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3480	2611	6088
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6094	19.335	NaN	7900.5	30	0	1313.8	0.037			+	34735	RWKVKRWD	8	46	587.3336791992188	NaN	0	587.3336791992188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RWKVKRWD_	REV__ENST00000377681.7_1_20:18123344-18123419:+|nuORF	24.20275056022122	1.7418937515398478	4				NaN	NaN	0	NaN	3481	2611	6088
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6095	19.335	NaN	7207.8	30	0	1151.3	0.141	+			41049	SVIELHRNK	9	71	548.3187265111284	1094.6229000890567	2	548.3199462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVIELHRNK_	ENSG00000107290|ENST00000224140|SETX;nc|ENSG00000107290|Q7Z333-3|SETX;nc|ENSG00000107290|Q7Z333-4|SETX;SETX|p.F1748Sfs*3|1|0.55|ENSG00000107290|chr9:132326355-132326355|A/-|frameshift_variant;SETX|p.G1134Efs*24|1|0.34|ENSG00000107290|chr9:132328199-132328199|T/-|frameshift_variant;SETX|p.G1252Dfs*9|2|0.2|ENSG00000107290|chr9:132327843-132327843|C/-|frameshift_variant;SETX|p.I2020Nfs*4|1|0.32|ENSG00000107290|chr9:132295919-132295920|-/T|frameshift_variant;SETX|p.N1361Ifs*53|1|0.11|ENSG00000107290|chr9:132327516-132327516|T/-|frameshift_variant;SETX|p.S1600*|1|0.07|ENSG00000107290|chr9:132326800-132326801|-/A|frameshift_variant;SETX|p.T2478Sfs*35|1|0.35|ENSG00000107290|chr9:132264836-132264840|TATGG/-|frameshift_variant	79.71258880314673	0.09879134589249085	4				NaN	NaN	0	NaN	3482	2611	6088
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6113	19.374	NaN	24069	30	0	7777.4	0.214	+			39538	STFSGLAKHK	10	76	538.2985297928313	1074.5825066524626	2	538.2986450195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STFSGLAKHK_	ENSG00000019549|ENST00000020945|SNAI2	200.56263349563793	4.024435085729535E-06	4				NaN	NaN	0	NaN	3497	2614	6112
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6114	19.377	NaN	4942.8	30	0	630.01	0.106			+	48080	VSSVGSLRK	9	61	466.78007671296723	931.5456004927345	2	466.77960205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSSVGSLRK_	REV__ENSG00000183421|ENST00000332512|RIPK4;REV__nc|ENSG00000183421|P57078|RIPK4;REV__RIPK4|p.P522Rfs*90|1|0.29|ENSG00000183421|chr21:41741772-41741772|G/-|frameshift_variant	45.97224482568171	0.3502073465782774	4				NaN	NaN	0	NaN	3498	2614	6112
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6115	19.379	NaN	52090	30	0	10700	0.106	+			41355	SVMAQVRQK	9	108	523.7922875356943	1045.5700221381885	2	523.79248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVMAQVRQK_	ENSG00000038358|ENST00000358933|EDC4;ENST00000572067.1_1_16:67917790-67918048:+|nuORF;nc|ENSG00000038358|Q6P2E9-2|EDC4	168.25843898104137	0.0030641937004078144	4				NaN	NaN	0	NaN	3499	2614	6112
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6116	19.381	NaN	4780	30	0	655.17	0.106	+			21038	KKKNPTPES	9	62	514.79052734375	NaN	0	514.79052734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KKKNPTPES_	ENSG00000213390|ENST00000358531|ARHGAP19;ENST00000487035.1_1_10:98985881-99016222:-|nuORF;ENST00000492211.5_1_10:98985881-99018422:-|nuORF;nc|ENSG00000213390|Q14CB8-2|ARHGAP19;nc|ENSG00000213390|Q14CB8-3|ARHGAP19;nc|ENSG00000213390|Q14CB8-4|ARHGAP19;nc|ENSG00000213390|Q14CB8-6|ARHGAP19;nc|ENSG00000213390|Q14CB8-7|ARHGAP19	29.14955571784316	0.3303970763161698	4				NaN	NaN	0	NaN	3500	2614	6112
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6117	19.383	NaN	3927.6	30	0	1240.8	0.106			+	22281	KTDCKIQL	8	59	474.7633253759643	NaN	0	474.762939453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KTDCKIQL_	REV__ENSG00000102699|ENST00000381989|PARP4	40.77816245573522	1.7418937515398478	4				NaN	NaN	0	NaN	3501	2614	6112
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6118	19.385	NaN	5910.6	30	0	848.79	0.037			+	-1	PFFFPIHGC	9	50	561.2679391145804	NaN	0	561.2679443359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_PFFFPIHGC(Carbamidomethyl (C))_	REV__ENSG00000112249|ENST00000369162|ASCC3	29.841539824830324	0.32690339240668626	4				NaN	NaN	0	NaN	3502	2614	6112
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6119	19.385	NaN	11915	30	0	2112.8	0.144				-1	EMVNYFLSPAF	11	57	667.309814453125	NaN	0	667.309814453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_EM(Oxidation (M))VNYFLSPAF_	ENSG00000164867|ENST00000297494|NOS3;nc|ENSG00000164867|P29474-2|NOS3;nc|ENSG00000164867|P29474-3|NOS3;NOS3|p.A641Pfs*97|1|0.11|ENSG00000164867|chr7:151006986-151006986|G/-|frameshift_variant;NOS3|p.G843Afs*115|1|0.27|ENSG00000164867|chr7:151010123-151010123|C/-|frameshift_variant	23.52269567125451	0.456735970842152	4				NaN	NaN	0	NaN	3503	2614	6112
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6137	19.423	NaN	22096	30	0	4388.5	0.214				-1	 	0	78	518.7512935864339	1035.4880342396677	2	518.7508544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3518	2617	6136
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6138	19.426	NaN	9608.5	30	0	3269.6	0.106			+	31238	QHCSDQQC	8	65	474.66901495251443	947.3234769718289	2	474.6689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QHCSDQQC_	REV__ENSG00000110799|ENST00000261405|VWF	38.80614096846853	0.6637206697844082	4				NaN	NaN	0	NaN	3519	2617	6136
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6139	19.429	NaN	3831.6	30	0	563.46	0.106	+			919	AEIEHHEM	8	65	498.2163781738651	994.4182034145302	2	498.2159729003906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEIEHHEM_	ENSG00000163939|ENST00000707071|PBRM1;nc|ENSG00000163939|Q86U86-2|PBRM1;nc|ENSG00000163939|Q86U86-3|PBRM1;nc|ENSG00000163939|Q86U86-4|PBRM1;nc|ENSG00000163939|Q86U86-5|PBRM1;nc|ENSG00000163939|Q86U86-6|PBRM1;nc|ENSG00000163939|Q86U86-7|PBRM1;nc|ENSG00000163939|Q86U86-8|PBRM1;nc|ENSG00000163939|Q86U86-9|PBRM1;nc|ENSG00000163939|Q86U86|PBRM1;PBRM1|p.H1521Pfs*95|1|0.12|ENSG00000163939|chr3:52554771-52554772|-/G|frameshift_variant;PBRM1|p.K991Nfs*23|1|0.28|ENSG00000163939|chr3:52587503-52587503|T/-|frameshift_variant;PBRM1|p.L1349Wfs*35|1|0.5|ENSG00000163939|chr3:52563324-52563324|G/-|frameshift_variant;PBRM1|p.N955Tfs*59|2|0.31|ENSG00000163939|chr3:52589171-52589171|T/-|frameshift_variant	53.351449002276354	0.5676011784961348	4				NaN	NaN	0	NaN	3520	2617	6136
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6140	19.43	NaN	7244.6	30	0	1361.3	0.106	+			39431	STECSMKGLCS	11	63	573.2373818938883	NaN	0	573.282958984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STECSMKGLCS_	ENST00000281523.7_1_3:21792410-21792695:-|nuORF	36.446750945000026	0.40298828388271424	4				NaN	NaN	0	NaN	3521	2617	6136
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6141	19.432	NaN	6565.5	30	0	1481	0.106			+	33774	RPYQLQHE	8	61	535.7721557617188	NaN	0	535.7721557617188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RPYQLQHE_	REV__ENST00000283943.9_1_2:230629390-230629495:-|nuORF	31.954861631926434	1.7418937515398478	4				NaN	NaN	0	NaN	3522	2617	6136
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6142	19.434	NaN	2428.1	30	0	303.56	0.035			+	13231	GIIPRQAFS	9	68	330.1907134616864	987.5503109852593	3	330.1907653808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GIIPRQAFS_	REV__tr|U7SP80|U7SP80_FUSNUAutotransporterdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01760PE=4SV=1	29.170058357718403	0.5306379469863586	4				NaN	NaN	0	NaN	3523	2617	6136
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6143	19.435	NaN	4872.9	30	0	759.96	0.14			+	31199	QGQVTEDAGI	10	75	509.24629729439664	1016.4780416555933	2	509.24609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QGQVTEDAGI_	REV__ENSG00000002746|ENST00000395891|HECW1;REV__ENST00000471043.1_1_7:43436315-43477745:+|nuORF;REV__ENST00000492310.5_1_7:43153648-43477745:+|nuORF;REV__HECW1|p.F1315*|1|0.35|ENSG00000002746|chr7:43509045-43509046|TT/-|frameshift_variant;REV__HECW1|p.S454Qfs*13|1|0.34|ENSG00000002746|chr7:43444526-43444527|-/C|frameshift_variant;REV__nc|ENSG00000002746|Q76N89-2|HECW1	47.657333605630114	0.47858658696240314	4				NaN	NaN	0	NaN	3524	2617	6136
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6161	19.472	NaN	41981	30	0	4238.9	0.211				-1	TWYRHYRCCRQ	11	106	835.8739020503809	1669.7332511675618	2	835.8724365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))TWYRHYRC(Carbamidomethyl (C))CRQ_	ENST00000448464.6_1_8:95941986-95942052:-|nuORF	2.92943323627438	0.8718097890272747	4				NaN	NaN	0	NaN	3539	2620	6160
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6162	19.476	NaN	51313	30	0	9452.8	0.106	+			5508	AVAEGAKNVMK	11	101	559.3057274259949	1116.5969019187896	2	559.3058471679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVAEGAKNVMK_	ENSG00000065243|ENST00000370521|PKN2;nc|ENSG00000065243|Q16513-2|PKN2;nc|ENSG00000065243|Q16513-3|PKN2;nc|ENSG00000065243|Q16513-4|PKN2	148.6902309647307	7.269320322201812E-05	4				NaN	NaN	0	NaN	3540	2620	6160
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6163	19.478	NaN	33118	30	0	5447.4	0.106	+			35529	SAVGTIVKK	9	82	451.7871240247847	901.5596951163694	2	451.7869567871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAVGTIVKK_	ENSG00000161526|ENST00000584667|SAP30BP;ENST00000293208.13_1_17:73701692-73702598:+|nuORF;ENST00000578756.5_1_17:73699860-73702598:+|nuORF;ENST00000579005.1_1_17:73702284-73702598:+|nuORF;ENST00000580322.5_1_17:73702024-73702598:+|nuORF;ENST00000580601.5_1_17:73689468-73702598:+|nuORF;ENST00000583329.5_1_17:73699767-73702598:+|nuORF;ENST00000584557.1_1_17:73702349-73702598:+|nuORF;nc|ENSG00000161526|Q9UHR5-2|SAP30BP	129.42129120953632	0.01549634589885217	4				NaN	NaN	0	NaN	3541	2620	6160
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6164	19.48	NaN	15647	30	0	2099.5	0.106	+			33126	REPAQPPRE	9	85	540.283146163418	1078.551739393636	2	540.776123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_REPAQPPRE_	ENSG00000243156|ENST00000441493|MICAL3;MICAL3|p.R1706Afs*24|1|0.3|ENSG00000243156|chr22:17817545-17817545|G/-|frameshift_variant	39.252832667884924	0.4290233611298554	4				NaN	NaN	0	NaN	3542	2620	6160
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6165	19.482	NaN	32578	30	0	6332.4	0.106	+			6443	AVYDRPGASPK	11	84	580.8072541826941	1159.5999554321882	2	580.8070678710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVYDRPGASPK_	ENSG00000030066|ENST00000378460|NUP160;nc|ENSG00000030066|Q12769|NUP160	166.0711670676379	3.86703434003832E-05	4				NaN	NaN	0	NaN	3543	2620	6160
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6166	19.483	NaN	18747	30	0	5485.6	0.035			+	12213	GARLANHRI	9	107	336.53384563364364	1006.579707501131	3	336.5340270996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GARLANHRI_	REV__BAZ1B|p.A1298Cfs*10|1|0.16|ENSG00000009954|chr7:73444083-73444084|-/G|frameshift_variant;REV__BAZ1B|p.E800Kfs*16|1|0.08|ENSG00000009954|chr7:73477067-73477067|C/-|frameshift_variant;REV__ENSG00000009954|ENST00000339594|BAZ1B;REV__nc|ENSG00000009954|Q9UIG0-2|BAZ1B	24.20275056022122	0.577060078256802	4				NaN	NaN	0	NaN	3544	2620	6160
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6167	19.484	NaN	5927.7	30	0	1086.4	0.139			+	30234	PSSSVVLLR	9	67	479.2903269499274	956.5661009666549	2	479.2899169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PSSSVVLLR_	REV__ENSG00000179832|ENST00000326134|MROH1;REV__ENST00000532255.5_1_8:145218705-145305309:+|nuORF;REV__ENST00000544576.1_1_8:145294015-145297158:+|nuORF;REV__MROH1|p.P1048Qfs*9|1|0.21|ENSG00000179832|chr8:144248894-144248894|C/-|frameshift_variant;REV__MROH1|p.Y551C|1|0.13|ENSG00000179832|chr8:144239633-144239633|A/G|missense_variant;REV__nc|ENSG00000179832|Q8NDA8-2|MROH1;REV__nc|ENSG00000179832|Q8NDA8-7|MROH1	84.9155231211612	0.07920012719736333	4				NaN	NaN	0	NaN	3545	2620	6160
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6185	19.52	NaN	42516	30	0	11983	0.214	+			5413	ATYHGSFSTK	10	84	366.8452214776818	1097.5138350332454	3	366.84539794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATYHGSFSTK_	ENSG00000163359|ENST00000295550|COL6A3;ENST00000491769.1_1_2:238233419-238250825:-|nuORF;ENST00000493608.1_1_2:238242084-238243404:-|nuORF;nc|ENSG00000163359|P12111-2|COL6A3;nc|ENSG00000163359|P12111-4|COL6A3	55.08391021199286	0.41055145962533396	4				NaN	NaN	0	NaN	3560	2623	6184
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6186	19.524	NaN	26876	30	0	11524	0.106	+			36816	SIEKGGSLPK	10	93	339.1974740137505	1014.5705926414514	3	339.19769287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SIEKGGSLPK_	ENSG00000181163|ENST00000296930|NPM1;nc|ENSG00000181163|P06748-2|NPM1	85.16082228582465	0.15877915086237185	4				NaN	NaN	0	NaN	3561	2623	6184
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6187	19.526	NaN	17138	30	0	7707.5	0.106			+	15844	GWPPATPAW	9	60	491.74344569635286	981.4723384595057	2	491.7430419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GWPPATPAW_	REV__ENST00000397591.2_1_15:39874020-39874080:+|nuORF	35.200714571348534	0.47427825964483533	4				NaN	NaN	0	NaN	3562	2623	6184
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6188	19.528	NaN	12969	30	0	2717.1	0.106	+			49140	VVMAADRSLKK	11	71	609.3552909237774	1216.6960289143547	2	609.3556518554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVMAADRSLKK_	ENSG00000189241|ENST00000368608|TSPYL1	30.85791745080538	0.6661168090068051	4				NaN	NaN	0	NaN	3563	2623	6184
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6189	19.529	NaN	11005	30	0	854.01	0.106	+			36817	SIEKGGSLPK	10	75	508.29299313900145	1014.5714333448029	2	508.2923583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SIEKGGSLPK_	ENSG00000181163|ENST00000296930|NPM1;nc|ENSG00000181163|P06748-2|NPM1	72.87924865735499	0.25379688738724415	4				NaN	NaN	0	NaN	3564	2623	6184
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6190	19.531	NaN	12012	30	0	1739.3	0.036	+			12858	GEPVNGRHTL	10	69	540.283146163418	1078.551739393636	2	540.283447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GEPVNGRHTL_	ENSG00000117298|ENST00000374893|ECE1;nc|ENSG00000117298|P42892-2|ECE1;nc|ENSG00000117298|P42892-3|ECE1;nc|ENSG00000117298|P42892-4|ECE1	53.08895987439943	0.42869529153390606	4				NaN	NaN	0	NaN	3565	2623	6184
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6191	19.532	NaN	13528	30	0	4743.5	0.146	+			48734	VTVDPKYHPK	10	57	395.220432935472	1182.639469406616	3	395.2206115722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VTVDPKYHPK_	ENSG00000115677|ENST00000310931|HDLBP;ENST00000487169.5_1_2:242169444-242174670:-|nuORF;nc|ENSG00000115677|Q00341-2|HDLBP	49.536043120802724	0.461275219792494	4				NaN	NaN	0	NaN	3566	2623	6184
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6209	19.57	NaN	12228	30	0	977.07	0.214			+	22551	KTRVPTSVL	9	77	500.811480917607	999.608408902014	2	500.81146240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTRVPTSVL_	REV__ENSG00000141027|ENST00000268712|NCOR1;REV__ENST00000464381.5_1_17:15935612-15961439:-|nuORF;REV__ENST00000470782.5_1_17:15935612-15971511:-|nuORF;REV__ENST00000472189.1_1_17:15960700-15961247:-|nuORF;REV__nc|ENSG00000141027|O75376-2|NCOR1	49.44154591367651	0.3095138337212152	4				NaN	NaN	0	NaN	3581	2626	6208
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6210	19.573	NaN	8156.6	30	0	1226.1	0.106	+			20881	KIQDLAKAPN	10	73	549.317174885217	1096.619796837234	2	549.317138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KIQDLAKAPN_	ENST00000439895.1_1_2:39038138-39038510:-|nuORF	49.536043120802724	0.461275219792494	4				NaN	NaN	0	NaN	3582	2626	6208
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6211	19.575	NaN	3468.4	30	0	539.03	0.106			+	18412	ISADGSKLD	9	62	453.2323424998913	904.4501320665826	2	453.2324523925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ISADGSKLD_	REV__CXADR|p.N201Mfs*27|1|0.28|ENSG00000154639|chr21:17560727-17560727|A/-|frameshift_variant;REV__ENSG00000154639|ENST00000284878|CXADR;REV__nc|ENSG00000154639|P78310-2|CXADR;REV__nc|ENSG00000154639|P78310-4|CXADR;REV__nc|ENSG00000154639|P78310-5|CXADR;REV__nc|ENSG00000154639|P78310-6|CXADR;REV__nc|ENSG00000154639|P78310-7|CXADR	66.42927471994793	0.16001998865088202	4				NaN	NaN	0	NaN	3583	2626	6208
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6212	19.577	NaN	7646.3	30	0	850.65	0.106	+			15800	GVVNIHENK	9	80	505.2753418703969	1008.5361308075938	2	505.275146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GVVNIHENK_	ENSG00000128607|ENST00000335420|KLHDC10;nc|ENSG00000128607|Q6PID8-2|KLHDC10	117.81106730687013	0.02252488733980868	4				NaN	NaN	0	NaN	3584	2626	6208
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6213	19.579	NaN	18153	30	0	1791.3	0.106	+			47933	VSMDNSNKYTK	11	85	643.8068059756268	1285.5990590180536	2	643.806884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSMDNSNKYTK_	ENSG00000118689|ENST00000406360|FOXO3;ENST00000395675.4_1_17:18575090-18575600:-|nuORF;nc|ENSG00000118689|O43524-2|FOXO3	164.6633220568051	4.243414140979949E-05	4				NaN	NaN	0	NaN	3585	2626	6208
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6214	19.581	NaN	7046.4	30	0	1486.5	0.037				-1	PASLLDTCAVC	11	57	575.2654418945312	NaN	0	575.2654418945312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_PASLLDTC(Carbamidomethyl (C))AVC_	ENSG00000197323|ENST00000358465|TRIM33;nc|ENSG00000197323|Q9UPN9-2|TRIM33;TRIM33|p.L700Efs*5|1|0.07|ENSG00000197323|chr1:114410281-114410282|-/CAGAATTCTCC|frameshift_variant;TRIM33|p.Q382Tfs*20|1|0.12|ENSG00000197323|chr1:114430809-114430810|-/T|frameshift_variant	32.81241826257853	0.4191849651971536	4				NaN	NaN	0	NaN	3586	2626	6208
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6215	19.582	NaN	4803.5	30	0	1016.9	0.141			+	50061	WFGYLHIE	8	59	532.7644653320312	NaN	0	532.7644653320312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_WFGYLHIE_	REV__ENSG00000113532|ENST00000231461|ST8SIA4;REV__ENSG00000177511|ENST00000324000|ST8SIA3;REV__ST8SIA4|p.F291L|1|0.36|ENSG00000113532|chr5:100812054-100812054|G/T|missense_variant;REV__ST8SIA4|p.F303Lfs*8|1|0.06|ENSG00000113532|chr5:100812021-100812022|-/TGTGTAAA|frameshift_variant	44.53106598305862	1.7418937515398478	4				NaN	NaN	0	NaN	3587	2626	6208
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6233	19.619	NaN	6196.1	30	0	848.99	0.214	+			22965	KVQTEVLQK	9	69	536.8218426541158	NaN	0	536.8218383789062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVQTEVLQK_	ENSG00000117395|ENST00000236051|EBNA1BP2;ENST00000463906.1_1_1:43630116-43636618:-|nuORF	93.5975768576971	0.03434413464716124	4				NaN	NaN	0	NaN	3602	2629	6232
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6234	19.622	NaN	10451	30	0	1935.7	0.106	+			36405	SETNDKLFP	9	66	525.758981214543	1049.503409495886	2	525.7587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SETNDKLFP_	ENSG00000133318|ENST00000377819|RTN3;nc|ENSG00000133318|O95197-2|RTN3;nc|ENSG00000133318|O95197-7|RTN3	56.72105179125745	0.24094814563026265	4				NaN	NaN	0	NaN	3603	2629	6232
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6235	19.624	NaN	3778.9	30	0	597.1	0.106	+			23513	LAHAIAGA	8	59	362.2099276099558	722.4053022867116	2	362.2110290527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LAHAIAGA_	nc|ENSG00000143748|O15381-4|NVL	24.504012794735996	0.7701314986472447	4				NaN	NaN	0	NaN	3604	2629	6232
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6236	19.626	NaN	4993.2	30	0	1165.3	0.106	+			15812	GVYGDVHRVK	10	59	565.3096923828125	NaN	0	565.3096923828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GVYGDVHRVK_	ENSG00000119314|ENST00000374257|PTBP3;nc|ENSG00000119314|O95758-1|PTBP3;nc|ENSG00000119314|O95758-2|PTBP3;nc|ENSG00000119314|O95758-4|PTBP3;nc|ENSG00000119314|O95758-5|PTBP3;nc|ENSG00000119314|O95758-7|PTBP3;nc|ENSG00000119314|O95758|PTBP3	43.650786325866115	0.3457431322078509	4				NaN	NaN	0	NaN	3605	2629	6232
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6237	19.628	NaN	2746.2	30	0	412.92	0.106	+			50983	YIMEEHDS	8	50	512.2095537125754	NaN	0	512.2092895507812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YIMEEHDS_	ENSG00000138688|ENST00000679879|BLTP1;KIAA1109-FSIP2|1|fusion;nc|ENSG00000138688|Q2LD37-4|BLTP1;nc|ENSG00000138688|Q2LD37-6|BLTP1;nc|ENSG00000138688|Q2LD37-7|BLTP1;nc|ENSG00000138688|Q2LD37|BLTP1	26.79610172149135	1.7418937515398478	4				NaN	NaN	0	NaN	3606	2629	6232
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6238	19.63	NaN	39770	30	0	6331.4	0.036	+			42061	SYAKSTQRF	9	90	544.280400770358	1086.546248607516	2	544.2803344726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SYAKSTQRF_	ENST00000430580.6_1_1:16939836-16939869:-|nuORF	120.27252224102466	0.02103478360410217	4				NaN	NaN	0	NaN	3607	2629	6232
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6239	19.63	NaN	4507	30	0	905.96	0.141			+	-1	ETMNAEQSR	9	63	541.2349270198662	1080.4553011065323	2	541.2349853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_ETM(Oxidation (M))NAEQSR_	REV__ENSG00000110723|ENST00000265843|EXPH5;REV__nc|ENSG00000110723|Q8NEV8-2|EXPH5	45.97224482568171	0.3502073465782774	4				NaN	NaN	0	NaN	3608	2629	6232
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6257	19.669	NaN	14245	30	0	4545.2	0.214				-1	 	0	63	334.7639442538881	667.5133355745762	2	334.76409912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3623	2632	6256
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6258	19.672	NaN	14426	30	0	1976.1	0.106			+	42165	SYTKGTLHPN	10	86	559.2859041641715	1116.5572553951429	2	559.2859497070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SYTKGTLHPN_	REV__ENSG00000112902|ENST00000382496|SEMA5A	73.84112541714126	0.2459384371494077	4				NaN	NaN	0	NaN	3624	2632	6256
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6259	19.675	NaN	57740	30	0	9395.9	0.106				-1	VALSPAPCR	9	93	485.7605890375561	NaN	0	485.760498046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_VALSPAPC(Carbamidomethyl (C))R_	ENST00000343638.9_1_17:42283996-42284245:-|nuORF	47.91560031466742	0.22105767942158736	4				NaN	NaN	0	NaN	3625	2632	6256
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6260	19.676	NaN	4882.5	30	0	468.24	0.106	+			33268	RGGMSRGGRG	10	66	495.75436568923175	989.4941784452635	2	496.2655029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RGGMSRGGRG_	ENSG00000182944|ENST00000397938|EWSR1;ENST00000400979.2_1_1:166244929-166246012:-|nuORF;ENST00000479135.5_1_22:29673993-29684776:+|nuORF;ENST00000483415.5_1_22:29664325-29684776:+|nuORF;EWSR1|p.M605Hfs*40|1|0.09|ENSG00000182944|chr22:29299731-29299732|-/C|frameshift_variant;EWSR1|p.M605Tfs*41|1|0.09|ENSG00000182944|chr22:29299733-29299734|-/CCTC|frameshift_variant;EWSR1|p.P622Lfs*4|1|0.39|ENSG00000182944|chr22:29299775-29299775|G/-|frameshift_variant;nc|ENSG00000182944|Q01844-3|EWSR1;nc|ENSG00000182944|Q01844-4|EWSR1;nc|ENSG00000182944|Q01844-5|EWSR1;nc|ENSG00000182944|Q01844-6|EWSR1	65.46538089061403	0.31613324008013116	4				NaN	NaN	0	NaN	3626	2632	6256
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6261	19.678	NaN	10518	30	0	2598.6	0.106	+			14225	GSSPVAMQK	9	58	452.73132965185994	NaN	0	452.7312316894531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GSSPVAMQK_	ENSG00000035403|ENST00000211998|VCL;nc|ENSG00000035403|P18206-2|VCL	74.25504064058377	0.09106938647426577	4				NaN	NaN	0	NaN	3627	2632	6256
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6262	19.68	NaN	7494.2	30	0	874.79	0.036	+			41476	SVNSHIYQR	9	76	552.2835730313174	1102.5525931294346	2	552.795654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVNSHIYQR_	ENSG00000177409|ENST00000318238|SAMD9L;SAMD9L|p.N1174Tfs*28|1|0.24|ENSG00000177409|chr7:93132451-93132451|T/-|frameshift_variant	68.84614121027924	0.14577793175421136	4				NaN	NaN	0	NaN	3628	2632	6256
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6263	19.681	NaN	4953.1	30	0	843.35	0.14	+			43800	TLLSSLKQK	9	65	509.31930355963914	1016.6240541860783	2	509.3191223144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TLLSSLKQK_	ENST00000584582.5_1_17:18210215-18218150:-|nuORF	45.97224482568171	0.3502073465782774	4				NaN	NaN	0	NaN	3629	2632	6256
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6281	19.72	NaN	175240	30	0	33653	0.132	+			5865	AVIQVGKEK	9	86	486.29812570244667	970.5816984716934	2	486.29791259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVIQVGKEK_	ENSG00000156675|ENST00000330843|RAB11FIP1;nc|ENSG00000156675|Q6WKZ4-3|RAB11FIP1;nc|ENSG00000156675|Q6WKZ4-5|RAB11FIP1;RAB11FIP1|p.E639Rfs*27|1|0.12|ENSG00000156675|chr8:37872887-37872888|-/T|frameshift_variant;RAB11FIP1|p.Q714Tfs*22|1|0.3|ENSG00000156675|chr8:37872662-37872663|-/T|frameshift_variant	180.86945649972546	0.001208757763874378	4				NaN	NaN	0	NaN	3644	2635	6280
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6282	19.722	NaN	64432	30	0	29467	0.106			+	19506	KAVASLTPKG	10	109	324.53415335280386	970.5806306586117	3	324.5343322753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KAVASLTPKG_	REV__ENSG00000118946|ENST00000377918|PCDH17;REV__nc|ENSG00000118946|O14917-2|PCDH17;REV__PCDH17|p.E776Dfs*7|1|0.07|ENSG00000118946|chr13:57634873-57634874|-/TGATG|frameshift_variant;REV__PCDH17|p.N765Mfs*16|1|0.55|ENSG00000118946|chr13:57634836-57634836|A/-|frameshift_variant	45.97224482568171	0.49411383603842696	4				NaN	NaN	0	NaN	3645	2635	6280
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6283	19.724	NaN	12495	30	0	3916.6	0.106			+	36505	SFAKKPKSK	9	73	340.87805903041425	1019.6123476914428	3	340.87823486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SFAKKPKSK_	REV__RAB11FIP2|p.P214Afs*17|1|0.1|ENSG00000107560|chr10:118040280-118040281|-/T|frameshift_variant	20.83715455343099	0.6085133616046181	4				NaN	NaN	0	NaN	3646	2635	6280
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6284	19.726	NaN	8839	30	0	2154.9	0.106			+	24940	LKVAGGEK	8	60	401.2448860842652	800.4752192353304	2	401.24505615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LKVAGGEK_	REV__EML5|p.N1682Mfs*7|1|0.04|ENSG00000165521|chr14:88621246-88621246|T/-|frameshift_variant;REV__EML6|p.N1675Mfs*7|2|0.32|ENSG00000214595|chr2:54962572-54962572|A/-|frameshift_variant;REV__EML6|p.R1767Efs*19|1|0.37|ENSG00000214595|chr2:54964127-54964127|C/-|frameshift_variant;REV__ENSG00000165521|ENST00000554922|EML5;REV__ENSG00000214595|ENST00000356458|EML6;REV__ENST00000490828.5_1_2:55184973-55193987:+|nuORF;REV__ENST00000553281.5_1_14:89088194-89171927:-|nuORF;REV__nc|ENSG00000165521|Q05BV3|EML5;REV__nc|ENSG00000214595|Q6ZMW3-2|EML6	143.10689835833298	0.2695411599407684	4				NaN	NaN	0	NaN	3647	2635	6280
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6285	19.728	NaN	25306	30	0	2773.1	0.106	+			3683	ASYVASTKYQK	11	84	623.3274441314479	1244.6403353296957	2	623.3275756835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASYVASTKYQK_	ENSG00000044115|ENST00000302763|CTNNA1;ENSG00000066032|ENST00000402739|CTNNA2;ENST00000522792.1_1_5:138268134-138269775:+|nuORF;nc|ENSG00000044115|P35221-2|CTNNA1;nc|ENSG00000044115|P35221-3|CTNNA1;nc|ENSG00000066032|P26232-2|CTNNA2;nc|ENSG00000066032|P26232-3|CTNNA2;nc|ENSG00000066032|P26232-4|CTNNA2;nc|ENSG00000066032|P26232-5|CTNNA2;nc|ENSG00000066032|P26232-6|CTNNA2	209.795921921709	3.554444218717377E-12	4				NaN	NaN	0	NaN	3648	2635	6280
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6286	19.73	NaN	5189.1	30	0	579.78	0.106	+			3750	ATAEECLKH	9	72	501.2408393468071	1000.4671257604142	2	501.2400207519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATAEECLKH_	ENSG00000164543|ENST00000319357|STK17A	79.71258880314673	0.09879134589249085	4				NaN	NaN	0	NaN	3649	2635	6280
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6287	19.732	NaN	8674.1	30	0	1291	0.036			+	49074	VVKMLCHLT	9	73	550.8034563194242	1099.5923597056483	2	550.8035888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_VVKMLC(Carbamidomethyl (C))HLT_	REV__ENSG00000090863|ENST00000422840|GLG1;REV__nc|ENSG00000090863|Q92896-2|GLG1;REV__nc|ENSG00000090863|Q92896-3|GLG1	55.50420428727701	0.2510918378945873	4				NaN	NaN	0	NaN	3650	2635	6280
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6305	19.768	NaN	41546	30	0	5690.5	0.214	+			2537	AQAESLRYK	9	88	533.2882831909392	1064.5620134486783	2	533.2885131835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AQAESLRYK_	ENSG00000149273|ENST00000531188|RPS3;ENST00000433853.1_1_3:183867695-183868220:+|nuORF;ENST00000487417.1_1_12:62415587-62415818:-|nuORF;nc|ENSG00000149273|P23396-2|RPS3;RPS3|p.L110I|1|0.35|ENSG00000149273|chr11:75402424-75402424|C/A|missense_variant	174.8648734531126	0.001936507438084573	4				NaN	NaN	0	NaN	3665	2638	6304
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6306	19.772	NaN	8728.3	30	0	1250.4	0.106	+			38858	SSNSMQTIQK	10	66	562.2747147385845	1122.534876543969	2	562.2745971679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSNSMQTIQK_	ENSG00000111057|ENST00000388835|KRT18;ENST00000446618.1_1_22:19245879-19246326:+|nuORF;ENST00000447938.1_1_21:21797263-21797497:-|nuORF;ENST00000506277.1_1_5:36886275-36886596:+|nuORF	174.8648734531126	0.002138720898421076	4				NaN	NaN	0	NaN	3666	2638	6304
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6307	19.774	NaN	17902	30	0	1738.6	0.106				-1	 	0	78	518.7512935864339	1035.4880342396677	2	518.7515869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3667	2638	6304
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6308	19.775	NaN	18690	30	0	2119.6	0.106	+			40622	SVAKTILKR	9	75	508.33500563946683	1014.6554583457337	2	508.3348388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVAKTILKR_	ENSG00000114978|ENST00000396049|MOB1A;ENSG00000173542|ENST00000309395|MOB1B;ENST00000497054.5_1_2:74386211-74405801:-|nuORF;nc|ENSG00000173542|Q7L9L4-2|MOB1B	159.33581866081465	0.004693099277440949	4				NaN	NaN	0	NaN	3668	2638	6304
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6309	19.777	NaN	57586	30	0	8455.2	0.106	+			41764	SVSNMVHTAK	10	103	537.2740534049616	1072.533553876723	2	537.2744750976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVSNMVHTAK_	ENSG00000115839|ENST00000264158|RAB3GAP1;nc|ENSG00000115839|Q15042-3|RAB3GAP1;nc|ENSG00000115839|Q15042-4|RAB3GAP1	177.56662115801413	0.0014809345314152106	4				NaN	NaN	0	NaN	3669	2638	6304
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6310	19.779	NaN	25055	30	0	12072	0.036	+			40623	SVAKTILKR	9	90	339.22544008175885	1014.6544908454766	3	339.2256164550781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVAKTILKR_	ENSG00000114978|ENST00000396049|MOB1A;ENSG00000173542|ENST00000309395|MOB1B;ENST00000497054.5_1_2:74386211-74405801:-|nuORF;nc|ENSG00000173542|Q7L9L4-2|MOB1B	66.96192283764107	0.15557981141143568	4				NaN	NaN	0	NaN	3670	2638	6304
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6311	19.78	NaN	2577.7	30	0	419.73	0.139			+	21836	KRGIILGAK	9	58	478.323974609375	NaN	0	478.323974609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KRGIILGAK_	REV__tr|U7T295|U7T295_FUSNUSmallribosomalsubunitproteinuS3OS=FusobacteriumnucleatumCTI-5OX=1316586GN=rpsCPE=3SV=1	35.61828744233558	0.29773779453147337	4				NaN	NaN	0	NaN	3671	2638	6304
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6329	19.819	NaN	16569	30	0	2581.9	0.213	+			14669	GTIEKSKLITK	11	86	609.3765593999319	1216.7385658666637	2	609.376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTIEKSKLITK_	ENSG00000144426|ENST00000683969|NBEAL1;NBEAL1|p.A1274Qfs*17|1|0.1|ENSG00000144426|chr2:203135766-203135766|A/-|frameshift_variant;NBEAL1|p.F1670Lfs*25|1|0.21|ENSG00000144426|chr2:203144843-203144843|T/-|frameshift_variant;NBEAL1|p.F2315Lfs*2|1|0.17|ENSG00000144426|chr2:203193900-203193900|T/-|frameshift_variant;NBEAL1|p.K2562Rfs*15|1|0.41|ENSG00000144426|chr2:203209306-203209306|A/-|frameshift_variant;NBEAL1|p.N2072Kfs*10|1|0.35|ENSG00000144426|chr2:203172825-203172826|-/A|frameshift_variant;NBEAL1|p.T1311Nfs*3|1|0.08|ENSG00000144426|chr2:203135875-203135876|-/A|frameshift_variant;nc|ENSG00000144426|Q6ZS30-1|NBEAL1;nc|ENSG00000144426|Q6ZS30|NBEAL1	222.18326054254544	3.348118159435037E-13	4				NaN	NaN	0	NaN	3686	2641	6328
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6330	19.822	NaN	14648	30	0	5834.3	0.106			+	25785	LSAPLPIDRR	10	71	569.3408031406894	1136.6670533481788	2	569.3408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSAPLPIDRR_	REV__ENST00000561040.1_1_19:47919907-47920643:-|nuORF	30.568863376406313	0.6301935916953115	4				NaN	NaN	0	NaN	3687	2641	6328
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6331	19.825	NaN	8076.7	30	0	764.09	0.106			+	-1	EICRLFVDDDM	11	71	706.810791015625	NaN	0	706.810791015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_EIC(Carbamidomethyl (C))RLFVDDDM_	REV__ENSG00000181222|ENST00000674977|POLR2A;REV__nc|ENSG00000181222|P24928|POLR2A	21.68575002086885	0.456735970842152	4				NaN	NaN	0	NaN	3688	2641	6328
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6332	19.826	NaN	8573.3	30	0	2440.5	0.106				-1	TSGCCSHTP	9	70	336.1296506960651	NaN	0	336.19415283203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_TSGC(Carbamidomethyl (C))C(Carbamidomethyl (C))SHTP_	ENST00000527370.5_1_11:67259506-67263940:-|nuORF	25.57405402267927	0.3484490411150625	4				NaN	NaN	0	NaN	3689	2641	6328
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6333	19.828	NaN	7638.7	30	0	1106.5	0.106	+			28630	NLAAMVWRRLL	11	69	671.8938598632812	NaN	0	671.8938598632812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NLAAMVWRRLL_	ENSG00000111412|ENST00000261318|SPRING1	29.550750289552195	0.43372083775723597	4				NaN	NaN	0	NaN	3690	2641	6328
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6334	19.83	NaN	4729.7	30	0	815.05	0.035				-1	CTCAQYQVG	9	64	515.208877935295	1028.40320293739	2	515.2088623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_CTC(Carbamidomethyl (C))AQYQVG_	ENST00000561440.1_1_15:83207600-83207885:-|nuORF	27.882242232435846	0.5426732730940306	4				NaN	NaN	0	NaN	3691	2641	6328
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6335	19.831	NaN	3488	30	0	877.65	0.138	+			32153	QSPQGRVM	8	43	451.72920586269595	901.4438587921919	2	451.7289733886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QSPQGRVM_	ENSG00000169564|ENST00000303577|PCBP1	31.954861631926434	0.7126016770032289	4				NaN	NaN	0	NaN	3692	2641	6328
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6353	19.87	NaN	9327.4	30	0	2753.1	0.214	+			7918	DSELRKGIV	9	91	339.529394272535	NaN	0	339.52935791015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DSELRKGIV_	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42|TTN;TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;TTN|p.I24998Nfs*2|1|0.35|ENSG00000155657|chr2:178566216-178566217|-/T|frameshift_variant;TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;TTN|p.K26626Nfs*34|1|0.34|ENSG00000155657|chr2:178561331-178561331|T/-|frameshift_variant;TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant;TTN|p.V27442Cfs*4|1|0.05|ENSG00000155657|chr2:178558107-178558108|-/A|frameshift_variant	37.81151784470057	0.28666463014928195	4				NaN	NaN	0	NaN	3707	2644	6352
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6354	19.873	NaN	21658	30	0	6199.1	0.106	+			43794	TLLFPPVW	8	113	324.85617525237205	971.5466963573163	3	324.8564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TLLFPPVW_	ENST00000251241.8_1_17:57685310-57685481:+|nuORF	54.76467175910256	0.5536104764165384	4				NaN	NaN	0	NaN	3708	2644	6352
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6355	19.876	NaN	4429	30	0	592.08	0.106			+	45766	VAFVHTHQ	8	65	469.7472950503375	NaN	0	469.74737548828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VAFVHTHQ_	REV__ENSG00000250673|ENST00000623665|REELD1	68.484700416344	1.7418937515398478	4				NaN	NaN	0	NaN	3709	2644	6352
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6356	19.877	NaN	5847.9	30	0	1223.9	0.106			+	-1	PCQARSAGMVA	11	63	582.2672640000358	NaN	0	582.26708984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_PC(Carbamidomethyl (C))QARSAGM(Oxidation (M))VA_	REV__ENSG00000224109|ENST00000417339|CENPVL3	29.170058357718403	0.43541742044178583	4				NaN	NaN	0	NaN	3710	2644	6352
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6357	19.879	NaN	4077.9	30	0	909.01	0.106	+			635	ADVWETFQQ	9	59	562.25537109375	NaN	0	562.25537109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ADVWETFQQ_	ENSG00000083807|ENST00000263093|SLC27A5;nc|ENSG00000083807|Q9Y2P5-2|SLC27A5	39.252832667884924	0.27938773122138094	4				NaN	NaN	0	NaN	3711	2644	6352
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6358	19.881	NaN	3815	30	0	463.4	0.035			+	21217	KLFTTSKPA	9	68	496.7902526855469	NaN	0	496.7902526855469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KLFTTSKPA_	REV__ENSG00000272333|ENST00000420124|KMT2B;REV__KMT2B|p.A1049Gfs*39|1|0.32|ENSG00000272333|chr19:35723812-35723813|-/G|frameshift_variant;REV__KMT2B|p.A2538Pfs*76|1|0.42|ENSG00000272333|chr19:35737693-35737693|G/-|frameshift_variant;REV__KMT2B|p.D1589Gfs*89|1|0.28|ENSG00000272333|chr19:35729058-35729059|-/G|frameshift_variant;REV__KMT2B|p.G1199Afs*156|1|0.16|ENSG00000272333|chr19:35725283-35725283|G/-|frameshift_variant;REV__KMT2B|p.G1879Vfs*16|5|0.4|ENSG00000272333|chr19:35732101-35732101|G/-|frameshift_variant;REV__KMT2B|p.G2123Vfs*30|1|0.34|ENSG00000272333|chr19:35732913-35732913|G/-|frameshift_variant;REV__KMT2B|p.G934Efs*52|1|0.1|ENSG00000272333|chr19:35723069-35723069|G/-|frameshift_variant;REV__KMT2B|p.K553Qfs*46|1|0.45|ENSG00000272333|chr19:35720996-35720997|-/C|frameshift_variant;REV__KMT2B|p.L2136Pfs*17|1|0.27|ENSG00000272333|chr19:35732956-35732956|T/-|frameshift_variant;REV__KMT2B|p.P1201Rfs*154|1|0.37|ENSG00000272333|chr19:35725288-35725288|C/-|frameshift_variant;REV__KMT2B|p.P1821Hfs*74|1|0.36|ENSG00000272333|chr19:35731927-35731927|C/-|frameshift_variant;REV__KMT2B|p.R1055Gfs*127|1|0.46|ENSG00000272333|chr19:35723827-35723827|G/-|frameshift_variant;REV__KMT2B|p.R1911Dfs*23|1|0.18|ENSG00000272333|chr19:35732274-35732274|C/-|frameshift_variant	39.252832667884924	0.27938773122138094	4				NaN	NaN	0	NaN	3712	2644	6352
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6359	19.882	NaN	4828.9	30	0	1023.9	0.141			+	44198	TREYKKGPN	9	64	546.7935791015625	NaN	0	546.7935791015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TREYKKGPN_	REV__tr|U7T422|U7T422_FUSNUPeptidyl-tRNAhydrolaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=pthPE=3SV=1	47.657333605630114	0.2228375344433429	4				NaN	NaN	0	NaN	3713	2644	6352
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6377	19.92	NaN	50631	30	0	6849.7	0.214	+			39143	SSVGSVITKK	10	96	503.300448075229	NaN	0	503.30047607421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSVGSVITKK_	ENSG00000076554|ENST00000518937|TPD52;ENST00000517445.5_1_8:80962678-80964851:-|nuORF;ENST00000521354.5_1_8:80950353-81083761:-|nuORF;ENST00000522364.5_1_8:80963727-80992703:-|nuORF;nc|ENSG00000076554|P55327-2|TPD52;nc|ENSG00000076554|P55327-3|TPD52;nc|ENSG00000076554|P55327-5|TPD52;nc|ENSG00000076554|P55327-6|TPD52;nc|ENSG00000076554|P55327-7|TPD52;nc|ENSG00000076554|P55327|TPD52	148.6902309647307	0.0005153051674288612	4				NaN	NaN	0	NaN	3728	2647	6376
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6378	19.924	NaN	10993	30	0	2590.2	0.106			+	-1	TEWMCLAL	8	80	328.1515167223365	981.4327207672095	3	328.1518249511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_TEWM(Oxidation (M))CLAL_	REV__ENST00000467721.5_1_13:51102150-51102324:+|nuORF	50.0245360154114	0.5941082100236891	4				NaN	NaN	0	NaN	3729	2647	6376
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6379	19.926	NaN	8024.2	30	0	1111.1	0.106			+	35705	SDLGQNRNLS	10	61	552.273706101043	1102.5328592688859	2	552.276123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SDLGQNRNLS_	REV__ENSG00000136155|ENST00000349847|SCEL;REV__nc|ENSG00000136155|O95171-2|SCEL;REV__nc|ENSG00000136155|O95171-3|SCEL	58.22992032128504	0.38193887838457763	4				NaN	NaN	0	NaN	3730	2647	6376
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6380	19.928	NaN	6343.8	30	0	885.9	0.106	+			47651	VSCPVGIKK	9	65	494.2865704295158	986.5585879258316	2	494.2862243652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_VSC(Carbamidomethyl (C))PVGIKK_	ENSG00000175806|ENST00000317173|MSRA;nc|ENSG00000175806|Q9UJ68-2|MSRA;nc|ENSG00000175806|Q9UJ68-3|MSRA;nc|ENSG00000175806|Q9UJ68-4|MSRA;nc|ENSG00000175806|Q9UJ68-5|MSRA	84.9155231211612	0.07920012719736333	4				NaN	NaN	0	NaN	3731	2647	6376
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6381	19.93	NaN	4062.5	30	0	550.58	0.106			+	24499	LGIELSGRQ	9	67	486.7778093663809	971.5410657995618	2	486.7806396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LGIELSGRQ_	REV__ENSG00000187634|ENST00000616016|SAMD11;REV__nc|ENSG00000187634|Q96NU1-4|SAMD11;REV__nc|ENSG00000187634|Q96NU1-5|SAMD11;REV__nc|ENSG00000187634|Q96NU1-6|SAMD11;REV__nc|ENSG00000187634|Q96NU1|SAMD11;REV__SAMD11|p.S218Qfs*4|1|0.46|ENSG00000187634|chr1:939401-939402|-/C|frameshift_variant	49.44154591367651	0.3095138337212152	4				NaN	NaN	0	NaN	3732	2647	6376
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6382	19.932	NaN	6837.7	30	0	1296.1	0.037				-1	GASSTLPCMKQ	11	70	569.765271638146	1137.515990343092	2	569.765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_GASSTLPCM(Oxidation (M))KQ_	RALGDS|p.R901C|1|0.35|ENSG00000160271|chr9:133098631-133098631|G/A|missense_variant	42.86426827375447	0.5187511139693657	4				NaN	NaN	0	NaN	3733	2647	6376
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6383	19.932	NaN	9282.7	30	0	774.95	0.147	+			20584	KFWFSYVYPYQ	11	75	764.3688513334178	1526.7231497336354	2	764.36767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KFWFSYVYPYQ_	tr|U7T3F7|U7T3F7_FUSNUDUF234domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00369PE=4SV=1	22.579656572578934	0.7529490144093228	4				NaN	NaN	0	NaN	3734	2647	6376
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6401	19.971	NaN	27786	30	0	4438.9	0.214	+			35465	SASSLHLTK	9	73	472.26417783162333	942.5138027300467	2	472.2638244628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SASSLHLTK_	ENSG00000181396|ENST00000313056|OGFOD3;nc|ENSG00000181396|Q6PK18-2|OGFOD3	123.20810148215591	0.019257656778428764	4				NaN	NaN	0	NaN	3749	2650	6400
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6402	19.975	NaN	13395	30	0	2047.3	0.106	+			87	AACSQYFKK	9	75	551.7714992985781	NaN	0	551.7716674804688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_AAC(Carbamidomethyl (C))SQYFKK_	ENSG00000178951|ENST00000322357|ZBTB7A	115.49404669440601	0.004735551190337385	4				NaN	NaN	0	NaN	3750	2650	6400
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6403	19.977	NaN	22511	30	0	3459.4	0.106	+			4414	ATIDSQHGIEK	11	89	599.8068483562375	1197.599143779275	2	599.8070678710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATIDSQHGIEK_	ENSG00000110002|ENST00000456829|VWA5A;nc|ENSG00000110002|O00534-2|VWA5A;nc|ENSG00000110002|O00534-3|VWA5A;nc|ENSG00000110002|O00534-4|VWA5A;VWA5A|p.D273Ifs*24|1|0.19|ENSG00000110002|chr11:124123014-124123014|A/-|frameshift_variant;VWA5A|p.D571Mfs*3|1|0.56|ENSG00000110002|chr11:124137094-124137094|A/-|frameshift_variant;VWA5A|p.G366Afs*38|1|0.21|ENSG00000110002|chr11:124123733-124123733|G/-|frameshift_variant	188.26969509050795	2.692034957335336E-06	4				NaN	NaN	0	NaN	3751	2650	6400
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6404	19.979	NaN	6640.9	30	0	669.51	0.106				-1	 	0	98	321.7001424210996	641.3857319089992	2	321.7003173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3752	2650	6400
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6405	19.981	NaN	5744.6	30	0	1030.3	0.106			+	31653	QMYYKAKQ	8	70	538.2656382011448	1074.5167234690896	2	538.265869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_QM(Oxidation (M))YYKAKQ_	REV__CCDC168|p.D4150Y|1|0.3|ENSG00000175820|chr13:102738249-102738249|C/A|missense_variant	50.0245360154114	0.5941082100236891	4				NaN	NaN	0	NaN	3753	2650	6400
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6406	19.983	NaN	4486	30	0	917.32	0.036	+			1868	AILEKSRLK	9	63	529.3403347357183	1056.6661165382366	2	529.3402099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AILEKSRLK_	ENSG00000101161|ENST00000266079|PRPF6;nc|ENSG00000101161|O94906-2|PRPF6;PRPF6|p.R763W|1|0.09|ENSG00000101161|chr20:64027684-64027684|C/T|missense_variant	42.86426827375447	0.38666266728046506	4				NaN	NaN	0	NaN	3754	2650	6400
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6407	19.983	NaN	6564.6	30	0	1256.8	0.142	+			38408	SSAEVIAQARK	11	69	580.3258305694951	NaN	0	580.325927734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSAEVIAQARK_	ENSG00000092964|ENST00000521913|DPYSL2;ENST00000521983.1_1_8:26484742-26500445:+|nuORF;nc|ENSG00000092964|Q16555-2|DPYSL2;nc|ENSG00000092964|Q16555|DPYSL2	65.69465075029274	0.17815223211740575	4				NaN	NaN	0	NaN	3755	2650	6400
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6425	20.022	NaN	28341	30	0	7860.5	0.215	+			35394	SAQGNVYVK	9	72	483.25591135254814	NaN	0	483.25592041015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAQGNVYVK_	ENSG00000131051|ENST00000253363|RBM39;ENST00000397254.2_1_X:43889279-43890164:+|nuORF;ENST00000429968.5_1_20:34292405-34322136:-|nuORF;ENST00000492779.5_1_20:34292405-34320086:-|nuORF;ENST00000496183.5_1_20:34292405-34295154:-|nuORF;nc|ENSG00000131051|Q14498-2|RBM39;nc|ENSG00000131051|Q14498-3|RBM39;NDUFS1-RBM39|1|fusion;NDUFS1-RBM39|2|fusion;NDUFS1-RBM39|3|fusion;NDUFS1-RBM39|4|fusion	150.36159442982594	0.0026033977239465623	4				NaN	NaN	0	NaN	3770	2653	6424
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6426	20.025	NaN	47215	30	0	7413.3	0.106	+			13265	GISETRIEK	9	103	516.7880628250907	1031.5615727169813	2	516.7879638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GISETRIEK_	ENSG00000079819|ENST00000337057|EPB41L2;ENSG00000082397|ENST00000341928|EPB41L3;ENSG00000159023|ENST00000343067|EPB41;ENST00000368126.2_1_6:131179278-131186801:-|nuORF;ENST00000452150.6_1_6:131179278-131188835:-|nuORF;nc|ENSG00000079819|O43491-2|EPB41L2;nc|ENSG00000079819|O43491-3|EPB41L2;nc|ENSG00000079819|O43491-4|EPB41L2;nc|ENSG00000082397|Q9Y2J2-2|EPB41L3;nc|ENSG00000082397|Q9Y2J2-4|EPB41L3;nc|ENSG00000159023|P11171-2|EPB41;nc|ENSG00000159023|P11171-3|EPB41;nc|ENSG00000159023|P11171-4|EPB41;nc|ENSG00000159023|P11171-5|EPB41;nc|ENSG00000159023|P11171-6|EPB41	128.60217544463768	0.015992218256422188	4				NaN	NaN	0	NaN	3771	2653	6424
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6427	20.027	NaN	5994.3	30	0	1242.6	0.106	+			3114	ASGSFKLNK	9	63	476.26659486979435	950.5186368063887	2	476.2663269042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASGSFKLNK_	ENSG00000124575|ENST00000244534|H1-3;ENSG00000124610|ENST00000244573|H1-1;ENSG00000168298|ENST00000304218|H1-4;ENSG00000184357|ENST00000331442|H1-5;ENSG00000187837|ENST00000343677|H1-2	88.17693792209575	0.07000514020414955	4				NaN	NaN	0	NaN	3772	2653	6424
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6428	20.029	NaN	9626	30	0	1593.8	0.106			+	-1	QCRELEIGAQV	11	80	651.8261089940087	1301.6376650548173	2	651.8256225585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_QC(Carbamidomethyl (C))RELEIGAQV_	REV__ENST00000462451.1_1_2:85818805-85820182:+|nuORF	35.15202426646627	0.6210751305041943	4				NaN	NaN	0	NaN	3773	2653	6424
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6429	20.031	NaN	4550.5	30	0	866.41	0.106	+			23194	KWYQIMKK	8	59	562.8157958984375	NaN	0	562.8157958984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KWYQIMKK_	ENSG00000115750|ENST00000263663|TAF1B;nc|ENSG00000115750|Q53T94-2|TAF1B;nc|ENSG00000115750|Q53T94-3|TAF1B	33.51558372728122	1.7418937515398478	4				NaN	NaN	0	NaN	3774	2653	6424
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6430	20.033	NaN	8390.5	30	0	1637.4	0.035	+			48477	VTLTTQHVK	9	79	513.8010511763233	1025.5875494194465	2	513.8009643554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTLTTQHVK_	ENSG00000127603|ENST00000564288|MACF1;ENST00000476350.1_1_1:39768622-39838291:+|nuORF;MACF1|p.A5223Lfs*8|1|0.21|ENSG00000127603|chr1:39388486-39388486|G/-|frameshift_variant;MACF1|p.N4824Kfs*19|1|0.33|ENSG00000127603|chr1:39387292-39387293|-/A|frameshift_variant;MACF1|p.S2157Ffs*3|1|0.37|ENSG00000127603|chr1:39333036-39333037|-/T|frameshift_variant;MACF1|p.T4896Lfs*29|1|0.27|ENSG00000127603|chr1:39387507-39387507|A/-|frameshift_variant;nc|ENSG00000127603|Q9UPN3-2|MACF1;nc|ENSG00000127603|Q9UPN3-3|MACF1;nc|ENSG00000127603|Q9UPN3-4|MACF1;nc|ENSG00000127603|Q9UPN3|MACF1	88.17693792209575	0.07000514020414955	4				NaN	NaN	0	NaN	3775	2653	6424
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6431	20.033	NaN	10399	30	0	1047.3	0.143				-1	DPGVHIQMPAQ	11	70	604.7880670463923	1207.5615811595844	2	604.7898559570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_DPGVHIQM(Oxidation (M))PAQ_	ENST00000396878.7_1_16:3185237-3187219:+|nuORF;ENST00000574902.5_1_16:3185089-3187219:+|nuORF	33.921630207806714	0.6339809607503234	4				NaN	NaN	0	NaN	3776	2653	6424
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6449	20.073	NaN	13348	30	0	3088.3	0.214			+	46768	VGTTSKDLPT	10	90	340.18523605245275	1017.5338787575583	3	340.1853332519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VGTTSKDLPT_	REV__ENSG00000169018|ENST00000306917|FEM1B	49.44154591367651	0.46214596422418036	4				NaN	NaN	0	NaN	3791	2656	6448
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6450	20.076	NaN	47360	30	0	6830.8	0.106	+			3038	ASFENVRAK	9	97	511.2749685692316	1020.5353842052632	2	511.2746887207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASFENVRAK_	ENSG00000136238|ENST00000348035|RAC1;ENSG00000169750|ENST00000306897|RAC3;ENST00000488373.5_1_7:6415539-6442074:+|nuORF;nc|ENSG00000136238|P63000-2|RAC1	138.06239232086	0.011389075116295402	4				NaN	NaN	0	NaN	3792	2656	6448
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6451	20.078	NaN	8048.8	30	0	1600.2	0.106	+			871	AEHEVKKVTL	10	79	577.3328247070312	NaN	0	577.3328247070312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEHEVKKVTL_	ENSG00000100813|ENST00000605057|ACIN1;nc|ENSG00000100813|Q9UKV3-2|ACIN1;nc|ENSG00000100813|Q9UKV3-3|ACIN1;nc|ENSG00000100813|Q9UKV3-5|ACIN1;nc|ENSG00000100813|Q9UKV3|ACIN1	106.88024417677582	0.010561040971168556	4				NaN	NaN	0	NaN	3793	2656	6448
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6452	20.08	NaN	8599.4	30	0	1075.7	0.106				-1	GMMCGSDSEM	10	74	568.6715127866114	1135.3284726400227	2	568.6722412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),2 Oxidation (M)	_GMM(Oxidation (M))C(Carbamidomethyl (C))GSDSEM(Oxidation (M))_	ENSG00000155761|ENST00000336338|SPAG17;SPAG17|p.L1608Ifs*4|1|0.34|ENSG00000155761|chr1:117996698-117996699|-/T|frameshift_variant;SPAG17|p.Q1264Rfs*3|1|0.29|ENSG00000155761|chr1:118025357-118025357|G/-|frameshift_variant;SPAG17|p.T1729Lfs*21|2|0.43|ENSG00000155761|chr1:117992642-117992642|T/-|frameshift_variant	10.265252068803164	0.7642865340254049	4				NaN	NaN	0	NaN	3794	2656	6448
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6453	20.082	NaN	3714.5	30	0	671.85	0.106	+			24835	LIVVGVGK	8	55	392.76941218597756	NaN	0	392.7694396972656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LIVVGVGK_	ENSG00000144426|ENST00000683969|NBEAL1;nc|ENSG00000144426|Q6ZS30-1|NBEAL1;nc|ENSG00000144426|Q6ZS30|NBEAL1	14.664097394203935	1.7418937515398478	4				NaN	NaN	0	NaN	3795	2656	6448
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6454	20.084	NaN	31518	30	0	4586.2	0.035	+			39057	SSSPVNVKK	9	81	494.27731263414313	986.5400723350863	2	494.2771911621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SSSPVNVKK_	ENSG00000153187|ENST00000640218|HNRNPU;ENST00000476241.2_2_1:245025757-245027609:-|nuORF;nc|ENSG00000153187|Q00839-2|HNRNPU	124.08010499294276	0.018729767491916592	4				NaN	NaN	0	NaN	3796	2656	6448
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6455	20.084	NaN	5380.1	30	0	753.78	0.14	+			32372	QVAGFCASFL	10	71	521.7553809806565	1041.4962090281128	2	521.7542724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QVAGFCASFL_	ENST00000533764.5_1_8:145690205-145690799:-|nuORF	34.172542307311794	0.6007644933930345	4				NaN	NaN	0	NaN	3797	2656	6448
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6473	20.121	NaN	15131	30	0	2447.7	0.215	+			5591	AVATKFVNK	9	80	489.2928255606521	976.5710981881042	2	489.29248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVATKFVNK_	ENSG00000038382|ENST00000344204|TRIO;ENST00000508717.1_1_5:14498631-14508016:+|nuORF;nc|ENSG00000038382|O75962-2|TRIO;nc|ENSG00000038382|O75962-3|TRIO;nc|ENSG00000038382|O75962-4|TRIO	132.757866228626	0.013877640931359021	4				NaN	NaN	0	NaN	3812	2659	6472
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6474	20.125	NaN	28548	30	0	4639	0.106	+			5250	ATVDIVQKK	9	91	501.30321005002406	1000.5918671668481	2	501.30291748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATVDIVQKK_	AP4B1|p.C320Afs*21|1|0.35|ENSG00000134262|chr1:113900060-113900060|A/-|frameshift_variant;ENSG00000134262|ENST00000369569|AP4B1;ENST00000489499.5_1_1:114442984-114447339:-|nuORF;nc|ENSG00000134262|Q9Y6B7-2|AP4B1	148.98678547993487	0.0071052929883181565	4				NaN	NaN	0	NaN	3813	2659	6472
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6475	20.127	NaN	14499	30	0	1294.6	0.106	+			2623	AQIENSAAVQK	11	77	579.8096674450513	1157.6047819569026	2	579.8094482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AQIENSAAVQK_	ENSG00000117226|ENST00000370481|GBP3;ENSG00000117228|ENST00000370473|GBP1;ENST00000394662.2_1_1:89887573-89889825:+|nuORF;GBP1|p.K391Sfs*28|1|0.19|ENSG00000117228|chr1:89056212-89056212|T/-|frameshift_variant;GBP3|p.G430Afs*34|1|0.37|ENSG00000117226|chr1:89010977-89010977|C/-|frameshift_variant;nc|ENSG00000117226|Q9H0R5-4|GBP3	176.59839592901017	1.0526362544376656E-05	4				NaN	NaN	0	NaN	3814	2659	6472
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6476	20.129	NaN	8103.9	30	0	1266.6	0.106	+			29351	NYYLPMVE	8	70	514.7408301480313	1027.4671073628624	2	514.7403564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NYYLPMVE_	ENSG00000163554|ENST00000643759|SPTA1;nc|ENSG00000163554|P02549-2|SPTA1	33.51558372728122	0.7005509609380386	4				NaN	NaN	0	NaN	3815	2659	6472
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6477	20.131	NaN	9996.3	30	0	2303.8	0.106	+			30540	QAKMMTNLVM	10	69	591.7892616557186	NaN	0	591.7890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_QAKM(Oxidation (M))MTNLVM_	ENSG00000021574|ENST00000315285|SPAST;nc|ENSG00000021574|Q9UBP0-2|SPAST;nc|ENSG00000021574|Q9UBP0-3|SPAST;nc|ENSG00000021574|Q9UBP0-4|SPAST	60.11826168202944	0.2333124524861241	4				NaN	NaN	0	NaN	3816	2659	6472
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6478	20.133	NaN	6627.7	30	0	2084	0.035	+			31167	QGKSIGTIKL	10	64	522.8247571004474	1043.6349612676947	2	523.2540893554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QGKSIGTIKL_	tr|U7SLW4|U7SLW4_FUSNUAutotransporterdomain-containingprotein(Fragment)OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01912PE=4SV=1	33.921630207806714	0.6028135429846169	4				NaN	NaN	0	NaN	3817	2659	6472
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6479	20.133	NaN	5978.2	30	0	1417.1	0.141			+	-1	TPCCMGLHEL	10	58	560.2360871690897	NaN	0	560.23583984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_TPCCM(Oxidation (M))GLHEL_	REV__BMPER|p.N305Kfs*25|1|0.05|ENSG00000164619|chr7:34055289-34055290|-/AAATAGAAATT|frameshift_variant;REV__ENSG00000164619|ENST00000649409|BMPER	21.9598887501803	0.4201028297492154	4				NaN	NaN	0	NaN	3818	2659	6472
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6497	20.172	NaN	5888.1	30	0	1866.5	0.214	+			48406	VTIKALKEK	9	66	515.3370696627054	1028.6595863922107	2	515.3368530273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTIKALKEK_	CUX1|p.A591Qfs*9|1|0.06|ENSG00000257923|chr7:102197181-102197182|-/CAGT|frameshift_variant;CUX1|p.E933Sfs*59|1|0.14|ENSG00000257923|chr7:102202089-102202089|C/-|frameshift_variant;CUX1|p.I1081Sfs*39|2|0.46|ENSG00000257923|chr7:102227471-102227471|C/-|frameshift_variant;ENSG00000257923|ENST00000292535|CUX1;ENST00000497815.5_1_7:101459310-101755188:+|nuORF;ENST00000558836.5_1_7:101575863-101926379:+|nuORF;ENST00000560541.5_1_7:101556607-101926379:+|nuORF;nc|ENSG00000257923|P39880-2|CUX1;nc|ENSG00000257923|P39880-3|CUX1;nc|ENSG00000257923|P39880-4|CUX1;nc|ENSG00000257923|P39880-5|CUX1;nc|ENSG00000257923|P39880-6|CUX1;nc|ENSG00000257923|P39880-9|CUX1;nc|ENSG00000257923|Q13948-10|CUX1;nc|ENSG00000257923|Q13948-2|CUX1;nc|ENSG00000257923|Q13948-9|CUX1;nc|ENSG00000257923|Q13948|CUX1	95.81516180277367	0.04847050768394289	4				NaN	NaN	0	NaN	3833	2662	6496
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6498	20.175	NaN	4267.2	30	0	1036.5	0.106				-1	 	0	47	506.2563454539873	1010.4981379747746	2	506.2560729980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3834	2662	6496
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6499	20.177	NaN	3625.4	30	0	314.29	0.106			+	-1	SIMGTFRSL	9	74	343.17925544415226	1026.5159369326568	3	343.8936462402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_SIM(Oxidation (M))GTFRSL_	REV__tr|U7SP80|U7SP80_FUSNUAutotransporterdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01760PE=4SV=1	32.81241826257853	0.4965981579233955	4				NaN	NaN	0	NaN	3835	2662	6496
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6500	20.179	NaN	5993.2	30	0	2667.8	0.106	+			16512	HEVDPVRRAV	10	44	393.21918161134766	NaN	0	393.21923828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HEVDPVRRAV_	ENSG00000118971|ENST00000261254|CCND2;nc|ENSG00000118971|P30279-2|CCND2	41.42661286455405	0.3598046802465243	4				NaN	NaN	0	NaN	3836	2662	6496
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6501	20.181	NaN	7000.7	30	0	1332.7	0.106	+			40924	SVFQTTDTKSK	11	65	621.3221435546875	NaN	0	621.3221435546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVFQTTDTKSK_	ENSG00000153130|ENST00000608372|SCOC;nc|ENSG00000153130|Q9UIL1-2|SCOC;nc|ENSG00000153130|Q9UIL1-3|SCOC;nc|ENSG00000153130|Q9UIL1-4|SCOC;nc|ENSG00000153130|Q9UIL1|SCOC	40.015381236134715	0.3870319917203201	4				NaN	NaN	0	NaN	3837	2662	6496
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6502	20.183	NaN	6146.6	30	0	1038.1	0.037	+			7815	DPQVRPLTLP	10	61	568.3279158083651	1134.6412786835301	2	568.3282470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DPQVRPLTLP_	ENST00000561090.5_1_14:24657607-24657993:-|nuORF	37.50817390946774	0.5721060100277453	4				NaN	NaN	0	NaN	3838	2662	6496
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6503	20.183	NaN	2046.6	30	0	249.65	0.14				-1	CNVMEPSQ	8	47	462.183304731028	NaN	0	462.2115783691406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_CNVM(Oxidation (M))EPSQ_	ENSG00000116106|ENST00000281821|EPHA4;EPHA4|p.M245Cfs*89|1|0.35|ENSG00000116106|chr2:221563821-221563821|T/-|frameshift_variant;EPHA4|p.P846Sfs*25|1|0.19|ENSG00000116106|chr2:221430113-221430114|-/G|frameshift_variant;nc|ENSG00000116106|P54764-2|EPHA4	21.9598887501803	1.7418937515398478	4				NaN	NaN	0	NaN	3839	2662	6496
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6521	20.223	NaN	7157.4	30	0	896.28	0.214	+			35548	SAVRPVIEK	9	69	499.80327960138646	997.592006269573	2	499.8029479980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAVRPVIEK_	ENSG00000116750|ENST00000367454|UCHL5;nc|ENSG00000116750|Q9Y5K5-2|UCHL5;nc|ENSG00000116750|Q9Y5K5-4|UCHL5;nc|ENSG00000116750|Q9Y5K5|UCHL5	83.6470233535746	0.08277643980271215	4				NaN	NaN	0	NaN	3854	2665	6520
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6522	20.226	NaN	6306.4	30	0	989.79	0.106	+			2960	ASEVLKHLK	9	74	512.811371605896	1023.6081902785921	2	512.8111572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASEVLKHLK_	ENSG00000089053|ENST00000261819|ANAPC5;ENST00000534976.5_1_12:121756302-121773353:-|nuORF;ENST00000535641.5_1_12:121746285-121765135:-|nuORF;ENST00000545218.5_1_12:121756099-121775126:-|nuORF;nc|ENSG00000089053|Q9UJX4-3|ANAPC5	90.36981228632155	0.0638227155548745	4				NaN	NaN	0	NaN	3855	2665	6520
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6523	20.228	NaN	7006.3	30	0	677.48	0.106			+	35644	SCLGEVGPQK	10	74	537.7646990813516	1073.5148452295032	2	538.2805786132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SC(Carbamidomethyl (C))LGEVGPQK_	REV__ENSG00000039319|ENST00000505560|ZFYVE16;REV__ENST00000511829.5_1_5:79738958-79744113:+|nuORF;REV__ENST00000512558.5_1_5:79729945-79747536:+|nuORF;REV__ZFYVE16|p.T1329Hfs*11|2|0.35|ENSG00000039319|chr5:80459451-80459451|A/-|frameshift_variant	60.11826168202944	0.36476464221954025	4				NaN	NaN	0	NaN	3856	2665	6520
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6524	20.23	NaN	4607.5	30	0	1038.6	0.106	+			3297	ASLSITTKK	9	66	474.7897070496629	947.5648611661259	2	474.7895202636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASLSITTKK_	ANK3|p.I2751Nfs*14|2|0.36|ENSG00000151150|chr10:60072629-60072630|-/T|frameshift_variant;ANK3|p.I2751Yfs*21|1|0.07|ENSG00000151150|chr10:60072630-60072630|T/-|frameshift_variant;ANK3|p.I3117Sfs*2|3|0.22|ENSG00000151150|chr10:60071532-60071532|T/-|frameshift_variant;ANK3|p.K1120Sfs*35|1|0.28|ENSG00000151150|chr10:60088328-60088328|T/-|frameshift_variant;ANK3|p.K2612Rfs*25|1|0.43|ENSG00000151150|chr10:60073046-60073046|T/-|frameshift_variant;ANK3|p.K2850Rfs*29|1|0.08|ENSG00000151150|chr10:60072332-60072332|T/-|frameshift_variant;ANK3|p.K3331Nfs*6|1|0.32|ENSG00000151150|chr10:60070888-60070888|T/-|frameshift_variant;ANK3|p.K3778Nfs*26|1|0.37|ENSG00000151150|chr10:60069547-60069547|T/-|frameshift_variant;ANK3|p.K4020Rfs*45|4|0.35|ENSG00000151150|chr10:60068822-60068822|T/-|frameshift_variant;ANK3|p.K4140Nfs*15|2|0.27|ENSG00000151150|chr10:60064188-60064188|T/-|frameshift_variant;ANK3|p.L1161Pfs*13|1|0.32|ENSG00000151150|chr10:60088205-60088206|-/G|frameshift_variant;ANK3|p.L1778Tfs*66|1|0.38|ENSG00000151150|chr10:60075550-60075551|-/G|frameshift_variant;ANK3|p.M3608Cfs*4|1|0.37|ENSG00000151150|chr10:60070059-60070059|T/-|frameshift_variant;ANK3|p.P2846Tfs*8|1|0.32|ENSG00000151150|chr10:60072346-60072347|-/C|frameshift_variant;ANK3|p.R961Kfs*27|1|0.13|ENSG00000151150|chr10:60114291-60114292|-/T|frameshift_variant;ANK3|p.S4352Vfs*2|1|0.51|ENSG00000151150|chr10:60055669-60055670|-/C|frameshift_variant;ANK3|p.W4141Mfs*12|1|0.36|ENSG00000151150|chr10:60064187-60064188|-/T|frameshift_variant;ENSG00000151150|ENST00000280772|ANK3;nc|ENSG00000151150|Q12955-4|ANK3;nc|ENSG00000151150|Q12955-5|ANK3;nc|ENSG00000151150|Q12955-7|ANK3	53.08895987439943	0.27122541748218487	4				NaN	NaN	0	NaN	3857	2665	6520
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6525	20.232	NaN	13576	30	0	5551.5	0.106			+	-1	SLQRYITM	8	85	343.17925544415226	1026.5159369326568	3	343.1794128417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_SLQRYITM(Oxidation (M))_	REV__ENST00000317829.12_1_11:94604974-94605094:+|nuORF	42.396135135203025	0.6414440140393314	4				NaN	NaN	0	NaN	3858	2665	6520
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6526	20.234	NaN	2834.4	30	0	625	0.034			+	38042	SPQGTYAHV	9	47	480.2344462890354	NaN	0	480.2344970703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SPQGTYAHV_	REV__ENSG00000099812|ENST00000215582|MISP	21.9598887501803	0.3626577482100488	4				NaN	NaN	0	NaN	3859	2665	6520
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6527	20.234	NaN	4406.5	30	0	594.03	0.143	+			20880	KIPRNPTY	8	72	330.1904969654734	987.5496614966203	3	330.5252990722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KIPRNPTY_	L1PA3_dup1115|chr2:110017555-110020014:+|1.763195504976095|0.4680770941019235|1.91|454.0|42|2|sense;L1PA3_dup1120|chr2:110351377-110353837:-|1.852683732690941|0.4358200479832063|2.09|470.0|48|2|sense;L1PA3_dup1321|chr2:173527290-173533317:-|1.892281258594111|0.2637255971055219|2.84|482.0|115|2|sense;L1PA5_dup2765|chr4:69723015-69726028:+|1.903650506224423|0.171219590839865|3.47|472.0|39|2|sense;L1PA6_dup546|chr2:49227587-49231532:-|4.547726375381561|0.2927699401366612|3.96|483.0|19|1|sense	29.14955571784316	0.7342621283720113	4				NaN	NaN	0	NaN	3860	2665	6520
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6545	20.273	NaN	16132	30	0	1505.4	0.214	+			33628	RLTRSSTTCE	10	78	577.2854650187005	1152.556377104201	2	577.28564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RLTRSSTTCE_	ENST00000290231.10_1_20:44692028-44693736:-|nuORF	63.42647028704847	0.33467688528802414	4				NaN	NaN	0	NaN	3875	2668	6544
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6546	20.276	NaN	4086.4	30	0	1564.8	0.106				-1	 	0	56	439.6758834182384	877.3372139032768	2	439.6759033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3876	2668	6544
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6547	20.279	NaN	14710	30	0	3609.4	0.106			+	-1	HDMMGNKRRDF	11	70	711.8228317209079	1421.6311105086156	2	711.8214111328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_HDM(Oxidation (M))MGNKRRDF_	REV__ACTN2|p.L772M|1|0.4|ENSG00000077522|chr1:236759736-236759736|C/A|missense_variant	30.317721548370564	0.6717830234747728	4				NaN	NaN	0	NaN	3877	2668	6544
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6548	20.28	NaN	7558.4	30	0	871.01	0.106	+			12546	GEGESSKPRQ	10	75	537.7646990813516	1073.5148452295032	2	537.76513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEGESSKPRQ_	ENST00000257860.8_1_12:49688081-49688252:+|nuORF	65.46538089061403	0.31613324008013116	4				NaN	NaN	0	NaN	3878	2668	6544
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6549	20.282	NaN	4859.4	30	0	974.64	0.106	+			28923	NRDLEVKIR	9	48	571.836181640625	NaN	0	571.836181640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NRDLEVKIR_	CON__Q3ZAW8;CON__Q9Z2K1	31.634271133179894	0.31785226469614103	4				NaN	NaN	0	NaN	3879	2668	6544
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6550	20.284	NaN	5841.8	30	0	1850	0.036				-1	LCPAAFEYK	9	44	549.767307463203	1097.520061993206	2	549.7677612304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_LC(Carbamidomethyl (C))PAAFEYK_	DOCK6|p.L1292P|1|0.32|ENSG00000130158|chr19:11216933-11216933|A/G|missense_variant	20.481830146152948	0.6112419832031293	4				NaN	NaN	0	NaN	3880	2668	6544
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6551	20.285	NaN	5394.1	30	0	878.13	0.141			+	8281	EAIERRRR	8	76	543.3157460558773	1084.6169391785545	2	543.3179931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EAIERRRR_	REV__ENSG00000137776|ENST00000380516|SLTM;REV__nc|ENSG00000137776|Q9NWH9-3|SLTM	55.50420428727701	0.5462892107279674	4				NaN	NaN	0	NaN	3881	2668	6544
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6569	20.324	NaN	12927	30	0	1317.6	0.214	+			48647	VTSQFISKK	9	81	519.3034222454307	1036.5922915576614	2	519.30322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTSQFISKK_	ENSG00000165458|ENST00000298229|INPPL1;ENST00000535985.1_1_11:71944736-71950103:+|nuORF;INPPL1|p.P976Hfs*155|1|0.31|ENSG00000165458|chr11:72237165-72237165|C/-|frameshift_variant;INPPL1|p.P977Tfs*7|1|0.5|ENSG00000165458|chr11:72237164-72237165|-/C|frameshift_variant;INPPL1|p.R1156Gfs*46|2|0.42|ENSG00000165458|chr11:72237704-72237704|C/-|frameshift_variant;nc|ENSG00000165458|O15357-2|INPPL1	95.4829727501206	0.04940705645337811	4				NaN	NaN	0	NaN	3896	2671	6568
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6570	20.328	NaN	27903	30	0	5803.2	0.106				-1	 	0	74	400.20058951307436	798.3866260929487	2	400.2008361816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3897	2671	6568
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6571	20.33	NaN	4945.9	30	0	774.47	0.106			+	21861	KRLEEEKK	8	66	530.3117517706694	NaN	0	530.3118286132812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KRLEEEKK_	REV__ENSG00000113758|ENST00000393565|DBN1;REV__ENST00000471767.1_1_5:176893910-176894598:-|nuORF;REV__ENST00000472831.5_1_5:176884436-176895158:-|nuORF;REV__nc|ENSG00000113758|Q16643-2|DBN1;REV__nc|ENSG00000113758|Q16643|DBN1	56.72105179125745	1.7418937515398478	4				NaN	NaN	0	NaN	3898	2671	6568
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6572	20.331	NaN	14319	30	0	4679.9	0.106				-1	 	0	81	336.19470817087813	335.18743170427814	1	336.1940612792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3899	2671	6568
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6573	20.333	NaN	27146	30	0	9735.5	0.106	+			18828	IVAAKGAG	8	84	343.7146612284164	NaN	0	343.714599609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IVAAKGAG_	ENSG00000130396|ENST00000683244|AFDN;nc|ENSG00000130396|P55196-1|AFDN;nc|ENSG00000130396|P55196-2|AFDN;nc|ENSG00000130396|P55196-3|AFDN;nc|ENSG00000130396|P55196-5|AFDN;nc|ENSG00000130396|P55196-6|AFDN;nc|ENSG00000130396|P55196|AFDN	5.08689130490037	1.7418937515398478	4				NaN	NaN	0	NaN	3900	2671	6568
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6574	20.335	NaN	6169.1	30	0	1072.9	0.034	+			13802	GQLSVHTPK	9	62	483.7719769806804	965.5294010281608	2	483.77191162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GQLSVHTPK_	ENSG00000114861|ENST00000649528|FOXP1;nc|ENSG00000285708|Q9H334-3|FOXP1;nc|ENSG00000285708|Q9H334-4|FOXP1;nc|ENSG00000285708|Q9H334-6|FOXP1;nc|ENSG00000285708|Q9H334-7|FOXP1;nc|ENSG00000285708|Q9H334-8|FOXP1	79.48907831485694	0.09975780661107167	4				NaN	NaN	0	NaN	3901	2671	6568
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6575	20.336	NaN	12682	30	0	1747.7	0.144	+			37185	SIYRPSKNLDK	11	79	660.8676983480617	1319.7208437629233	2	660.86767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SIYRPSKNLDK_	ENSG00000100603|ENST00000261531|SNW1	63.69406221917213	0.2904805327065929	4				NaN	NaN	0	NaN	3902	2671	6568
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6592	20.373	NaN	81914	30	0	14187	0.214	+			2602	AQGNVYHLK	9	95	515.2777326601725	1028.540912387145	2	515.2774658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AQGNVYHLK_	ENSG00000143013|ENST00000370544|LMO4	199.70438780651162	3.456851077920069E-05	4				NaN	NaN	0	NaN	3916	2674	6591
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6593	20.377	NaN	35726	30	0	9315.8	0.106	+			6021	AVMDVVKKQK	10	85	573.3393427870874	1144.6641326409747	2	573.3394165039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVMDVVKKQK_	ENSG00000092201|ENST00000216297|SUPT16H;SUPT16H|p.K393Sfs*29|2|0.2|ENSG00000092201|chr14:21364882-21364882|T/-|frameshift_variant;SUPT16H|p.S365Mfs*24|1|0.04|ENSG00000092201|chr14:21365096-21365097|-/A|frameshift_variant;SUPT16H|p.Y764Cfs*2|1|0.36|ENSG00000092201|chr14:21359493-21359494|AT/-|frameshift_variant	150.36159442982594	0.008431331982545942	4				NaN	NaN	0	NaN	3917	2674	6591
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6594	20.379	NaN	31173	30	0	4219.9	0.106	+			41720	SVSEVMKESK	10	93	562.2868029230061	1122.5590529128121	2	562.2869873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVSEVMKESK_	ENSG00000132305|ENST00000410111|IMMT;ENST00000474969.5_1_2:86385703-86422514:-|nuORF;ENST00000486633.1_1_2:86400704-86422514:-|nuORF;nc|ENSG00000132305|Q16891-2|IMMT;nc|ENSG00000132305|Q16891-3|IMMT;nc|ENSG00000132305|Q16891-4|IMMT	262.83941265199945	2.289123897299731E-31	4				NaN	NaN	0	NaN	3918	2674	6591
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6595	20.381	NaN	34303	30	0	4069.7	0.106	+			27740	MQNMSIHTK	9	89	545.262877863289	1088.5112027933778	2	545.2628784179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MQNMSIHTK_	CON__H-INV:HIT000292931;CON__P05787;CON__REFSEQ:XP_092267;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	143.37361013837676	0.008897369944672323	4				NaN	NaN	0	NaN	3919	2674	6591
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6596	20.383	NaN	7460.4	30	0	3447.9	0.106			+	36532	SFGMPCDP	8	52	463.67237007826196	925.330187223324	2	463.6717224121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C),Oxidation (M)	_SFGM(Oxidation (M))PC(Carbamidomethyl (C))DP_	REV__ENST00000342115.8_1_1:110174007-110174325:+|nuORF	44.53106598305862	0.628196326904373	4				NaN	NaN	0	NaN	3920	2674	6591
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6597	20.385	NaN	4183.9	30	0	1502.2	0.037	+			24149	LELLEGLNKG	10	75	362.54486176956254	1084.6127559088877	3	362.5451965332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LELLEGLNKG_	ENST00000484530.5_1_3:55545064-55640922:-|nuORF	21.9598887501803	0.7004979571547932	4				NaN	NaN	0	NaN	3921	2674	6591
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6598	20.385	NaN	4593.9	30	0	755.47	0.14	+			31200	QGRAQRPFC	9	62	531.7675749291311	NaN	0	531.7674560546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QGRAQRPFC_	ENST00000519478.1_1_5:139248990-139250660:-|nuORF	38.80614096846853	0.28164298475537564	4				NaN	NaN	0	NaN	3922	2674	6591
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6616	20.421	NaN	9251.6	30	0	2224.2	0.215				-1	KEDKIQQMN	9	53	383.8569945125408	1148.5491541378224	3	383.8572082519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_KEDKIQQM(Oxidation (M))N_	ENSG00000144821|ENST00000693548|MYH15;MYH15|p.E1364Vfs*7|1|0.04|ENSG00000144821|chr3:108414346-108414347|-/GGAGTTA|frameshift_variant;MYH15|p.F777Lfs*12|1|0.26|ENSG00000144821|chr3:108454134-108454134|A/-|frameshift_variant;MYH15|p.T1279Ifs*7|1|0.04|ENSG00000144821|chr3:108421141-108421142|-/ATAA|frameshift_variant	28.081489160057373	0.5408112046645406	4				NaN	NaN	0	NaN	3937	2677	6615
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6617	20.425	NaN	7916.8	30	0	1648	0.106	+			2054	ALAEKTSHV	9	61	478.26402040079284	954.5134878683857	2	478.2637634277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ALAEKTSHV_	ENSG00000115107|ENST00000393110|STEAP3;ENST00000409811.5_2_2:120015228-120020911:+|nuORF;nc|ENSG00000115107|Q658P3-3|STEAP3;nc|ENSG00000115107|Q658P3|STEAP3	93.19546047674547	0.05585629608842056	4				NaN	NaN	0	NaN	3938	2677	6615
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6618	20.427	NaN	4665	30	0	865.41	0.106	+			11279	FIWMDMSSP	9	49	557.2422917908241	1112.470030648448	2	557.2425537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FIWMDMSSP_	tr|U7T8S4|U7T8S4_FUSNUPhzFfamilyphenazinebiosynthesisproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00150PE=4SV=1	21.9598887501803	0.5980208138527809	4				NaN	NaN	0	NaN	3939	2677	6615
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6619	20.429	NaN	3539.2	30	0	578.06	0.106			+	42048	SWPFVFSPS	9	55	527.2570190429688	NaN	0	527.2570190429688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SWPFVFSPS_	REV__ENST00000394077.7_1_3:101405380-101405572:-|nuORF	45.9519527083369	0.2345902329052062	4				NaN	NaN	0	NaN	3940	2677	6615
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6620	20.431	NaN	4488.9	30	0	1026.7	0.106			+	-1	CETCVFPR	8	66	534.7340172218524	1067.4534815105046	2	534.7341918945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))ETC(Carbamidomethyl (C))VFPR_	REV__ENSG00000140548|ENST00000268154|ZNF710	37.15910966729921	0.6739408393984688	4				NaN	NaN	0	NaN	3941	2677	6615
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6621	20.432	NaN	1431.8	30	0	193.11	0.037			+	44506	TSSSHALIGQM	11	40	377.85335321411986	1130.5382302425596	3	377.85357666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TSSSHALIGQM_	REV__ENST00000494399.5_1_1:45480123-45480207:+|nuORF	18.531049691330335	0.7837198200183355	4				NaN	NaN	0	NaN	3942	2677	6615
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6622	20.433	NaN	6600.2	30	0	1115.6	0.141	+			12886	GERTQECSAF	10	62	564.2408901533845	1126.467227373569	2	564.2388305664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GERTQECSAF_	ENSG00000198169|ENST00000292562|ZNF251	29.170058357718403	0.6416167986984785	4				NaN	NaN	0	NaN	3943	2677	6615
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6640	20.472	NaN	23327	30	0	4335.4	0.214	+			15110	GTQPGPLLKK	10	81	519.8192815530685	1037.624010172937	2	519.8190307617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTQPGPLLKK_	ENSG00000123243|ENST00000397146|ITIH5;ENST00000476417.5_1_10:7615057-7659255:-|nuORF;ENST00000492668.5_1_10:7611547-7618533:-|nuORF;ITIH5|p.L690*|1|0.49|ENSG00000123243|chr10:7569749-7569749|G/-|frameshift_variant;nc|ENSG00000123243|Q86UX2-2|ITIH5;nc|ENSG00000123243|Q86UX2-3|ITIH5;nc|ENSG00000123243|Q86UX2-4|ITIH5;nc|ENSG00000123243|Q86UX2|ITIH5	109.82975700811294	0.04850514657194457	4				NaN	NaN	0	NaN	3958	2680	6639
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6641	20.475	NaN	8142.5	30	0	917.48	0.106	+			48425	VTISSVEKK	9	72	495.79546288989667	989.5763728465934	2	495.794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTISSVEKK_	ENSG00000143811|ENST00000343818|PYCR2	98.62937762414208	0.04060045538121712	4				NaN	NaN	0	NaN	3959	2680	6639
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6642	20.477	NaN	7228.5	30	0	1166	0.106	+			182	AALAKAIEK	9	73	457.7872379835627	913.5599230339254	2	457.786865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AALAKAIEK_	ENSG00000108946|ENST00000589228|PRKAR1A;nc|ENSG00000108946|P10644-2|PRKAR1A	113.41158876095287	0.025516849225023126	4				NaN	NaN	0	NaN	3960	2680	6639
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6643	20.479	NaN	14482	30	0	2620.1	0.106	+			35281	SALTDKAIVKK	11	78	587.3640260241057	1172.7134991150112	2	587.3638305664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SALTDKAIVKK_	ENSG00000176485|ENST00000415826|PLAAT3;ENST00000394613.3_1_11:63342419-63381578:-|nuORF	102.04737869847887	0.056454446805991904	4				NaN	NaN	0	NaN	3961	2680	6639
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6644	20.481	NaN	4702.3	30	0	957.75	0.106			+	7570	DIIIEEIFS	9	67	539.785888671875	NaN	0	539.785888671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DIIIEEIFS_	REV__CCDC73|p.N638Ifs*18|1|0.36|ENSG00000186714|chr11:32614405-32614405|T/-|frameshift_variant;REV__CCDC73|p.R1066Efs*13|1|0.08|ENSG00000186714|chr11:32602859-32602859|C/-|frameshift_variant;REV__CCDC73|p.S466Kfs*5|1|0.27|ENSG00000186714|chr11:32614921-32614922|-/T|frameshift_variant;REV__CCDC73|p.S672Vfs*22|1|0.26|ENSG00000186714|chr11:32614304-32614304|T/-|frameshift_variant;REV__CCDC73|p.T895Lfs*8|1|0.13|ENSG00000186714|chr11:32613635-32613635|T/-|frameshift_variant;REV__ENSG00000186714|ENST00000335185|CCDC73;REV__nc|ENSG00000186714|Q6ZRK6-2|CCDC73	44.377184641726394	0.24544280798894275	4				NaN	NaN	0	NaN	3962	2680	6639
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6645	20.483	NaN	2173.8	30	0	471.76	0.032			+	15076	GTPRNGPL	8	50	406.2244948900653	810.4344368469306	2	406.2247009277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTPRNGPL_	REV__ENSG00000090905|ENST00000395799|TNRC6A;REV__ENST00000568903.5_1_16:24803023-24807335:+|nuORF;REV__nc|ENSG00000090905|Q8NDV7-2|TNRC6A;REV__nc|ENSG00000090905|Q8NDV7-5|TNRC6A;REV__nc|ENSG00000090905|Q8NDV7-6|TNRC6A	47.91560031466742	0.6071945918984287	4				NaN	NaN	0	NaN	3963	2680	6639
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6646	20.483	NaN	10167	30	0	2442.5	0.144			+	34327	RTNRHSLVVTQ	11	64	655.8705444335938	NaN	0	655.8705444335938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RTNRHSLVVTQ_	REV__ENSG00000183638|ENST00000382483|RP1L1;REV__nc|ENSG00000183638|Q8IWN7-2|RP1L1;REV__RP1L1|p.G2243Rfs*6|1|0.25|ENSG00000183638|chr8:10607371-10607372|-/T|frameshift_variant;REV__RP1L1|p.V381Cfs*109|1|0.28|ENSG00000183638|chr8:10612957-10612957|C/-|frameshift_variant	28.383774762235813	0.43892155336841665	4				NaN	NaN	0	NaN	3964	2680	6639
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6664	20.523	NaN	120380	30	0	25908	0.206			+	20252	KEMHTKLN	8	105	500.7658150289862	999.5170771247724	2	500.7657775878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEMHTKLN_	REV__ANKRD18A|p.K865Rfs*16|1|0.35|ENSG00000180071|chr9:38577200-38577200|T/-|frameshift_variant;REV__ENSG00000180071|ENST00000399703|ANKRD18A;REV__ENSG00000230453|ENST00000684830|ANKRD18B;REV__ENST00000354752.5_1_9:99922575-99942308:-|nuORF;REV__nc|ENSG00000230453|A2A2Z9|ANKRD18B	82.30502934623384	0.30436709589983096	4				NaN	NaN	0	NaN	3979	2683	6663
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6665	20.526	NaN	39515	30	0	16883	0.106			+	-1	AVHVKCSLS	9	77	334.1793862023637	999.516329207291	3	334.1796569824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_AVHVKC(Carbamidomethyl (C))SLS_	REV__ENSG00000167508|ENST00000301012|MVD;REV__ENST00000563785.5_1_16:88722464-88729488:-|nuORF;REV__ENST00000568709.5_1_16:88722865-88725108:-|nuORF	26.69291269510374	0.5537881896960711	4				NaN	NaN	0	NaN	3980	2683	6663
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6666	20.528	NaN	13241	30	0	1679	0.106				-1	 	0	60	432.75022181126707	863.4858906893342	2	432.7503662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	3981	2683	6663
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6667	20.53	NaN	10612	30	0	3950	0.106	+			35214	SAKTAIFKT	9	108	322.8586855869198	965.5542273609594	3	322.8587951660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SAKTAIFKT_	ENST00000323588.8_2_3:52284308-52284410:+|nuORF	34.172542307311794	0.4838870758800184	4				NaN	NaN	0	NaN	3982	2683	6663
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6668	20.532	NaN	5299.2	30	0	696.03	0.106	+			38227	SQKMFVNTK	9	73	541.7870283998091	1081.559503866418	2	541.7872924804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SQKMFVNTK_	ENSG00000164654|ENST00000340080|MIOS;MIOS|p.L817Ifs*5|1|0.38|ENSG00000164654|chr7:7605982-7605983|-/A|frameshift_variant;nc|ENSG00000164654|Q9NXC5-2|MIOS	89.02883481214508	0.06760336634167786	4				NaN	NaN	0	NaN	3983	2683	6663
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6669	20.534	NaN	6594.9	30	0	991.98	0.032			+	47372	VPGTRTCP	8	75	415.71310649574116	NaN	0	415.7131652832031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VPGTRTCP_	REV__OSR2|p.Y58Ifs*79|1|0.45|ENSG00000164920|chr8:98949120-98949120|G/-|frameshift_variant	53.351449002276354	1.7418937515398478	4				NaN	NaN	0	NaN	3984	2683	6663
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6670	20.534	NaN	16025	30	0	2637.6	0.144			+	-1	RNETQCTTNSL	11	77	662.3028033506231	1322.591053768046	2	662.30224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_RNETQC(Carbamidomethyl (C))TTNSL_	REV__ENSG00000122420|ENST00000370757|PTGFR;REV__nc|ENSG00000122420|P43088-2|PTGFR;REV__nc|ENSG00000122420|P43088-3|PTGFR;REV__nc|ENSG00000122420|P43088-4|PTGFR;REV__nc|ENSG00000122420|P43088-5|PTGFR;REV__nc|ENSG00000122420|P43088-6|PTGFR;REV__nc|ENSG00000122420|P43088-7|PTGFR;REV__PTGFR|p.V137Lfs*18|1|0.04|ENSG00000122420|chr1:78493151-78493152|-/CTTCT|frameshift_variant	27.047317107675042	0.7060868989289394	4				NaN	NaN	0	NaN	3985	2683	6663
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6688	20.572	NaN	77554	30	0	8961.2	0.191	+			6476	AVYLSTCKDSK	11	102	636.318521047753	1270.622489162306	2	636.3184814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_AVYLSTC(Carbamidomethyl (C))KDSK_	ENSG00000231925|ENST00000434618|TAPBP;nc|ENSG00000231925|O15533-3|TAPBP;nc|ENSG00000231925|O15533-4|TAPBP	159.33581866081465	5.4966198810242E-05	4				NaN	NaN	0	NaN	4000	2686	6687
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6689	20.576	NaN	21579	30	0	3272.7	0.106	+			15407	GTYGLDSVKKK	11	73	598.3375848236832	1194.6606167141663	2	598.3377075195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTYGLDSVKKK_	ENSG00000087338|ENST00000282570|GMCL1	87.71336657091298	0.10813547024994734	4				NaN	NaN	0	NaN	4001	2686	6687
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6690	20.578	NaN	7312.4	30	0	1141.4	0.106			+	-1	MQHLIGHNM	9	71	556.7513889202224	1111.4882249072448	2	556.7512817382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Oxidation (M)	_M(Oxidation (M))QHLIGHNM(Oxidation (M))_	REV__nc|ENSG00000128944|Q9Y448-2|KNSTRN	30.503639358989545	0.5181749237905803	4				NaN	NaN	0	NaN	4002	2686	6687
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6691	20.579	NaN	6020.8	30	0	1268.3	0.106	+			14732	GTITPKISK	9	64	472.79244579313064	943.5703386530613	2	472.7919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTITPKISK_	ABI3BP|p.K701Sfs*41|1|0.1|ENSG00000154175|chr3:100780137-100780137|T/-|frameshift_variant;ENSG00000154175|ENST00000471714|ABI3BP;nc|ENSG00000154175|Q7Z7G0|ABI3BP	93.1432384553994	0.056003526918089595	4				NaN	NaN	0	NaN	4003	2686	6687
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6692	20.581	NaN	6447.1	30	0	1013.7	0.106	+			8660	EDSGRGVQIQ	10	76	544.7724726656842	NaN	0	544.7726440429688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EDSGRGVQIQ_	ENSG00000171603|ENST00000377298|CLSTN1;nc|ENSG00000171603|O94985-2|CLSTN1	40.05817265558897	0.3684561582319974	4				NaN	NaN	0	NaN	4004	2686	6687
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6693	20.583	NaN	13348	30	0	1256.9	0.106	+			42796	TEALNHHNL	9	89	524.7621880986476	1047.509823264095	2	524.7625122070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TEALNHHNL_	ENSG00000179344|ENST00000434651|HLA-DQB1;ENSG00000232629|ENST00000437316|HLA-DQB2;ENST00000487676.1_1_6:32629660-32630092:-|nuORF;nc|ENSG00000179344|P01920|HLA-DQB1;nc|ENSG00000232629|P05538-2|HLA-DQB2;nc|ENSG00000232629|P05538|HLA-DQB2	87.69643885390035	0.07135982304947239	4				NaN	NaN	0	NaN	4005	2686	6687
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6694	20.585	NaN	10041	30	0	1452.4	0.036	+			39981	STMLATKTVK	10	75	540.3101196289062	NaN	0	540.3101196289062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STMLATKTVK_	ENSG00000126883|ENST00000359428|NUP214;ENST00000525980.5_1_9:134025776-134070755:+|nuORF;nc|ENSG00000126883|P35658-2|NUP214;nc|ENSG00000126883|P35658-3|NUP214;nc|ENSG00000126883|P35658-4|NUP214;nc|ENSG00000126883|P35658-5|NUP214;NUP214|p.P1285Rfs*3|1|0.28|ENSG00000126883|chr9:131197346-131197359|CCCAGGAGAACCTG/-|frameshift_variant	99.01295224348159	0.019778302521515547	4				NaN	NaN	0	NaN	4006	2686	6687
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6712	20.622	NaN	37858	30	0	7099.8	0.215	+			14099	GSLGGQINK	9	84	437.24276864558936	872.4709843579788	2	437.2428894042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSLGGQINK_	ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC;PRKDC|p.D2437Wfs*3|1|0.11|ENSG00000253729|chr8:47840161-47840162|-/CA|frameshift_variant;PRKDC|p.E1557Sfs*16|1|0.16|ENSG00000253729|chr8:47886051-47886051|C/-|frameshift_variant;PRKDC|p.G1227Vfs*50|2|0.31|ENSG00000253729|chr8:47893306-47893306|C/-|frameshift_variant;PRKDC|p.K3681Nfs*6|1|0.32|ENSG00000253729|chr8:47785174-47785177|TTCT/-|frameshift_variant;PRKDC|p.M3670*|1|0.5|ENSG00000253729|chr8:47785212-47785212|T/-|frameshift_variant;PRKDC|p.M3846Cfs*12|1|0.13|ENSG00000253729|chr8:47779047-47779047|T/-|frameshift_variant;PRKDC|p.M4020Cfs*2|1|0.31|ENSG00000253729|chr8:47776968-47776968|T/-|frameshift_variant;PRKDC|p.N3605Kfs*3|1|0.22|ENSG00000253729|chr8:47788993-47788994|-/T|frameshift_variant;PRKDC|p.N4037Ifs*15|1|0.17|ENSG00000253729|chr8:47776916-47776916|T/-|frameshift_variant;PRKDC|p.R2704Gfs*13|2|0.34|ENSG00000253729|chr8:47834238-47834238|T/-|frameshift_variant;PRKDC|p.S3402Ifs*16|1|0.04|ENSG00000253729|chr8:47799302-47799303|-/AAACCGTGAGTTAGAGGAGGTAA|frameshift_variant;PRKDC|p.S4099Qfs*6|1|0.25|ENSG00000253729|chr8:47774265-47774265|A/-|frameshift_variant;PRKDC|p.T3268Pfs*7|1|0.5|ENSG00000253729|chr8:47803426-47803426|T/-|frameshift_variant;PRKDC|p.W3401Cfs*4|1|0.01|ENSG00000253729|chr8:47799304-47799305|-/AATGAATA|frameshift_variant	211.38894812892048	4.691605655969127E-08	4				NaN	NaN	0	NaN	4021	2689	6711
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6713	20.626	NaN	175540	30	0	20379	0.106	+			5238	ATVAGVHVK	9	105	441.2634681819326	880.5123834306652	2	441.2636413574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATVAGVHVK_	ENSG00000232838|ENST00000432901|PET117	171.38481719736927	0.0025305361306121837	4				NaN	NaN	0	NaN	4022	2689	6711
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6714	20.628	NaN	14969	30	0	2073.5	0.106	+			36633	SGGPLIVHK	9	79	454.27152684880764	906.5285007644153	2	454.2713623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SGGPLIVHK_	ENSG00000243649|ENST00000425368|CFB;ENST00000482312.1_1_6:31918808-31919804:+|nuORF	134.81075121484326	0.012914550297035062	4				NaN	NaN	0	NaN	4023	2689	6711
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6715	20.63	NaN	14452	30	0	3172.1	0.106	+			14327	GSYSKAFAR	9	85	493.7562097353133	NaN	0	493.7562255859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GSYSKAFAR_	ENSG00000005175|ENST00000005386|RPAP3;nc|ENSG00000005175|Q9H6T3-2|RPAP3;nc|ENSG00000005175|Q9H6T3-3|RPAP3	142.36107225718385	0.0009557606088349292	4				NaN	NaN	0	NaN	4024	2689	6711
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6716	20.632	NaN	19125	30	0	7289.6	0.106	+			31019	QETHLKQQL	9	81	562.8067499911369	1123.5989470490738	2	562.806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QETHLKQQL_	ENSG00000084652|ENST00000373610|TXLNA	71.87747018426188	0.13267044672804276	4				NaN	NaN	0	NaN	4025	2689	6711
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6717	20.634	NaN	14444	30	0	5449	0.037	+			31020	QETHLKQQL	9	61	375.539790489647	1123.597542069141	3	375.53997802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QETHLKQQL_	ENSG00000084652|ENST00000373610|TXLNA	35.61828744233558	0.47037581924408073	4				NaN	NaN	0	NaN	4026	2689	6711
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6718	20.634	NaN	5907.5	30	0	725.54	0.141			+	30808	QEATTKKLPA	10	76	543.8114691962832	1085.6083854593662	2	543.8114624023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QEATTKKLPA_	REV__ENSG00000159723|ENST00000290953|AGRP	47.657333605630114	0.47858658696240314	4				NaN	NaN	0	NaN	4027	2689	6711
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6736	20.672	NaN	16130	30	0	3530.6	0.214			+	31961	QQSYSSQK	8	62	478.2284897253994	954.4424265175988	2	478.2281799316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QQSYSSQK_	REV__ENSG00000270647|ENST00000605844|TAF15;REV__nc|ENSG00000270647|Q92804-2|TAF15;REV__TAF15|p.E285Rfs*41|1|0.28|ENSG00000270647|chr17:35838489-35838489|G/-|frameshift_variant;REV__TAF15|p.Y531Lfs*56|1|0.31|ENSG00000270647|chr17:35844881-35844882|-/G|frameshift_variant	56.72105179125745	0.5342425954139568	4				NaN	NaN	0	NaN	4042	2692	6735
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6737	20.676	NaN	13802	30	0	2261.9	0.106	+			5193	ATTLPIRNK	9	81	507.30884698336666	1012.6031410335333	2	507.3087158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATTLPIRNK_	ANKRD17|p.K886Sfs*4|1|0.39|ENSG00000132466|chr4:73139959-73139959|T/-|frameshift_variant;ANKRD17|p.L2249Yfs*84|1|0.34|ENSG00000132466|chr4:73090884-73090884|G/-|frameshift_variant;ENSG00000132466|ENST00000358602|ANKRD17;ENST00000514252.1_1_4:73978989-74017230:-|nuORF;nc|ENSG00000132466|O75179-2|ANKRD17;nc|ENSG00000132466|O75179-3|ANKRD17;nc|ENSG00000132466|O75179-4|ANKRD17;nc|ENSG00000132466|O75179-6|ANKRD17;nc|ENSG00000132466|O75179-7|ANKRD17	99.01295224348159	0.040209060045561164	4				NaN	NaN	0	NaN	4043	2692	6735
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6738	20.678	NaN	10104	30	0	1126.6	0.106			+	48380	VTHIESSQI	9	99	338.5133024130836	1012.5180778394508	3	338.5134582519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTHIESSQI_	REV__ENST00000374711.5_1_10:35464603-35477327:+|nuORF;REV__ENST00000472813.1_1_10:35464831-35468254:+|nuORF;REV__nc|ENSG00000095794|Q03060-1|CREM;REV__nc|ENSG00000095794|Q03060-20|CREM;REV__nc|ENSG00000095794|Q03060-21|CREM;REV__nc|ENSG00000095794|Q03060-6|CREM;REV__nc|ENSG00000095794|Q03060|CREM	63.30626980617807	0.18605348971131092	4				NaN	NaN	0	NaN	4044	2692	6735
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6739	20.68	NaN	5616.9	30	0	617.62	0.106	+			9283	EHLERLAL	8	81	327.52205838254696	979.5443457478409	3	327.52215576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EHLERLAL_	ENSG00000257218|ENST00000551765|GATC	33.51558372728122	0.7005509609380386	4				NaN	NaN	0	NaN	4045	2692	6735
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6740	20.682	NaN	14602	30	0	6346.4	0.106	+			218	AALRPLVKPK	10	78	364.91303614387266	1091.717279031818	3	364.9132995605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AALRPLVKPK_	ENSG00000144713|ENST00000429711|RPL32;ENST00000452606.2_1_3:12880846-12881736:-|nuORF	63.53385203322761	0.33370026130094593	4				NaN	NaN	0	NaN	4046	2692	6735
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6741	20.683	NaN	3202.3	30	0	552	0.035	+			2251	ALTQTDRKI	9	54	523.3037142787505	1044.5928756243009	2	523.3034057617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ALTQTDRKI_	ENSG00000050393|ENST00000379170|MCUR1	21.9598887501803	0.5980208138527809	4				NaN	NaN	0	NaN	4047	2692	6735
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6742	20.684	NaN	7269.4	30	0	1115.2	0.142	+			21704	KQHYPCTTW	9	68	582.2677333371896	1162.5209137411791	2	582.26708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KQHYPCTTW_	ENSG00000204856|ENST00000377673|FAM216A;ENST00000538285.6_1_12:110906680-110924532:+|nuORF;ENST00000548449.1_1_12:110906663-110924532:+|nuORF;ENST00000548869.1_1_12:110906313-110924532:+|nuORF;FAM216A|p.K249Rfs*6|1|0.44|ENSG00000204856|chr12:110490055-110490055|A/-|frameshift_variant	35.61828744233558	0.47037581924408073	4				NaN	NaN	0	NaN	4048	2692	6735
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6760	20.723	NaN	13228	30	0	3653.5	0.213	+			34316	RTMSEAALVRK	11	62	631.3558829726196	1260.6972130120391	2	631.3560180664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTMSEAALVRK_	ENSG00000169435|ENST00000307439|RASSF6;nc|ENSG00000169435|Q6ZTQ3-3|RASSF6;nc|ENSG00000169435|Q6ZTQ3-4|RASSF6;nc|ENSG00000169435|Q6ZTQ3|RASSF6;RASSF6|p.K253Nfs*25|1|0.16|ENSG00000169435|chr4:73582195-73582195|T/-|frameshift_variant	42.42483347401837	0.5247639237124502	4				NaN	NaN	0	NaN	4063	2695	6759
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6761	20.727	NaN	2577.3	30	0	269.14	0.106	+			46028	VAVTRAKAL	9	53	464.8000793457031	NaN	0	464.8000793457031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VAVTRAKAL_	ENSG00000155363|ENST00000369645|MOV10;ENST00000468624.5_1_1:113242306-113242605:+|nuORF;ENST00000494319.1_1_1:113242363-113243003:+|nuORF	67.49366992349736	0.1173583512313808	4				NaN	NaN	0	NaN	4064	2695	6759
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6762	20.729	NaN	8501.5	30	0	2530.9	0.106				-1	TSENCMQH	8	83	336.1294563767177	NaN	0	336.1940612792969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_TSENC(Carbamidomethyl (C))MQH_	ENSG00000147724|ENST00000395297|FAM135B;ENST00000482951.6_1_8:139144838-139379577:-|nuORF;FAM135B|p.A704Cfs*7|1|0.18|ENSG00000147724|chr8:138152365-138152366|-/A|frameshift_variant;nc|ENSG00000147724|Q49AJ0-2|FAM135B;nc|ENSG00000147724|Q49AJ0-3|FAM135B;nc|ENSG00000147724|Q49AJ0-4|FAM135B	30.503639358989545	1.7418937515398478	4				NaN	NaN	0	NaN	4065	2695	6759
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6763	20.731	NaN	6673.5	30	0	1395.1	0.106			+	13380	GLASVACTFHS	11	68	546.762286189275	1091.5100194453498	2	546.7622680664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GLASVACTFHS_	REV__ENSG00000134569|ENST00000378623|LRP4;REV__LRP4|p.C191Afs*206|1|0.17|ENSG00000134569|chr11:46899010-46899010|G/-|frameshift_variant	47.657333605630114	0.4531673460382624	4				NaN	NaN	0	NaN	4066	2695	6759
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6764	20.732	NaN	4800.9	30	0	698.58	0.106	+			18793	ITQYPHAVGK	10	68	557.3065186138541	NaN	0	557.3065795898438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ITQYPHAVGK_	ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656-2|DDOST;nc|ENSG00000244038|P39656-3|DDOST;nc|ENSG00000244038|P39656|DDOST	90.60085204095205	0.05159456971369581	4				NaN	NaN	0	NaN	4067	2695	6759
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6765	20.734	NaN	6128.2	30	0	879.58	0.037			+	2281	ALYSDLHKLT	10	69	580.8196392369216	1159.624725540643	2	580.8192749023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ALYSDLHKLT_	REV__ENSG00000223501|ENST00000445902|VPS52;REV__ENST00000493379.1_1_6:33232539-33235000:-|nuORF;REV__nc|ENSG00000223501|Q8N1B4-2|VPS52;REV__VPS52|p.L502Wfs*63|1|0.48|ENSG00000223501|chr6:33264395-33264395|C/-|frameshift_variant;REV__VPS52|p.Q497Pfs*33|1|0.25|ENSG00000223501|chr6:33264408-33264409|-/G|frameshift_variant	29.14955571784316	0.6417842315402807	4				NaN	NaN	0	NaN	4068	2695	6759
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6766	20.735	NaN	7789.2	30	0	1119.7	0.144			+	-1	TPKYRALNVTM	11	55	655.351318359375	NaN	0	655.351318359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_TPKYRALNVTM(Oxidation (M))_	REV__ENSG00000266173|ENST00000336174|STRADA;REV__ENST00000580553.1_3_17:61784755-61805729:-|nuORF;REV__ENST00000581505.6_2_17:61784845-61790870:-|nuORF;REV__nc|ENSG00000266173|Q7RTN6-2|STRADA;REV__nc|ENSG00000266173|Q7RTN6-3|STRADA;REV__nc|ENSG00000266173|Q7RTN6-4|STRADA;REV__nc|ENSG00000266173|Q7RTN6-5|STRADA;REV__nc|ENSG00000266173|Q7RTN6-6|STRADA;REV__STRADA|p.H200Pfs*3|1|0.18|ENSG00000266173|chr17:63707401-63707401|T/-|frameshift_variant;REV__STRADA|p.R333Gfs*42|2|0.35|ENSG00000266173|chr17:63704444-63704444|G/-|frameshift_variant	16.71738777980365	0.456735970842152	4				NaN	NaN	0	NaN	4069	2695	6759
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6784	20.774	NaN	18328	30	0	5602.7	0.214			+	8360	EALKLRNVA	9	97	338.54179770043197	1012.6035637014959	3	338.5419616699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EALKLRNVA_	REV__ENSG00000080839|ENST00000373664|RBL1;REV__nc|ENSG00000080839|P28749-2|RBL1	37.81151784470057	0.4459294069877048	4				NaN	NaN	0	NaN	4084	2698	6783
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6785	20.778	NaN	20255	30	0	5384.6	0.106	+			46806	VIAESVVKK	9	77	486.80826577939393	971.6019786255879	2	486.8079833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VIAESVVKK_	ENSG00000112367|ENST00000230124|FIG4	136.26810882979174	0.012230845423532208	4				NaN	NaN	0	NaN	4085	2698	6783
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6786	20.78	NaN	6925.9	30	0	1270.2	0.106	+			1128	AELQREAMQQ	10	69	602.2913660090268	NaN	0	602.291259765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AELQREAMQQ_	nc|ENSG00000108852|Q14168-3|MPP2	51.52775601994872	0.29594378441454594	4				NaN	NaN	0	NaN	4086	2698	6783
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6787	20.782	NaN	7671.7	30	0	3263.1	0.106			+	29506	PDKSILIRR	9	68	366.56424792334064	1096.670914370222	3	366.5645446777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PDKSILIRR_	REV__ENST00000488315.5_1_7:149570449-149570881:-|nuORF	25.57405402267927	0.5642445186134241	4				NaN	NaN	0	NaN	4087	2698	6783
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6788	20.784	NaN	2759.3	30	0	348.36	0.106			+	8855	EEPICDVP	8	52	451.20322386317895	900.3918947931579	2	451.2032165527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EEPICDVP_	REV__ENSG00000071909|ENST00000408978|MYO3B;REV__ENST00000317935.10_1_2:171400495-171509628:+|nuORF;REV__nc|ENSG00000071909|Q8WXR4-4|MYO3B;REV__nc|ENSG00000071909|Q8WXR4-7|MYO3B	26.79610172149135	0.7524337208463756	4				NaN	NaN	0	NaN	4088	2698	6783
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6789	20.785	NaN	4699.1	30	0	759.69	0.036			+	21510	KNNIEIKKK	9	67	557.8510131835938	NaN	0	557.8510131835938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KNNIEIKKK_	REV__tr|U7SPW0|U7SPW0_FUSNUMarRfamilytranscriptionalregulatorOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01640PE=4SV=1	37.50817390946774	0.28819615062043347	4				NaN	NaN	0	NaN	4089	2698	6783
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6790	20.786	NaN	3935.5	30	0	376.51	0.14			+	46752	VGSLVHIAQ	9	62	462.2688975358572	NaN	0	462.2690124511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VGSLVHIAQ_	REV__ENSG00000176092|ENST00000308182|CRYBG2	37.15910966729921	0.2899585034171616	4				NaN	NaN	0	NaN	4090	2698	6783
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6807	20.824	NaN	28445	30	0	3078.6	0.214	+			36788	SICGKMFKK	9	82	549.793521927124	1097.5724909210478	2	549.7938842773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SIC(Carbamidomethyl (C))GKMFKK_	ENSG00000105732|ENST00000359044|ZNF574;nc|ENSG00000105732|Q6ZN55-2|ZNF574	87.69643885390035	0.07135982304947239	4				NaN	NaN	0	NaN	4104	2701	6806
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6808	20.827	NaN	58832	30	0	13671	0.106	+			5530	AVAIKAMAK	9	83	451.7781156954142	901.5416784576284	2	451.778076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVAIKAMAK_	EIF5A|p.A145P|1|0.15|ENSG00000132507|chr17:7311608-7311608|G/C|missense_variant;ENSG00000132507|ENST00000336458|EIF5A;ENSG00000253626|ENST00000520547|EIF5AL1;nc|ENSG00000132507|P63241-2|EIF5A	108.08749611321984	0.03094949498378333	4				NaN	NaN	0	NaN	4105	2701	6806
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6809	20.83	NaN	13807	30	0	2762.7	0.106	+			31187	QGPILLIVGQ	10	69	519.3216044117784	1036.6286558903566	2	519.3213500976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QGPILLIVGQ_	ENSG00000177465|ENST00000326303|ACOT4	46.45678178249821	0.4896490706773647	4				NaN	NaN	0	NaN	4106	2701	6806
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6810	20.831	NaN	20994	30	0	3809.5	0.106			+	31025	QETRQLALRL	10	79	614.361793807387	1226.709034681574	2	614.3619995117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QETRQLALRL_	REV__ENSG00000144747|ENST00000398559|TMF1;REV__nc|ENSG00000144747|P82094-2|TMF1	59.93077597824379	0.36646980200755325	4				NaN	NaN	0	NaN	4107	2701	6806
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6811	20.833	NaN	6859.3	30	0	2288.4	0.106	+			41824	SVSTFLKKK	9	70	346.5499025331873	NaN	0	346.5498962402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVSTFLKKK_	DDX60|p.F1672Lfs*25|1|0.08|ENSG00000137628|chr4:168220678-168220678|A/-|frameshift_variant;DDX60|p.T1194Pfs*8|1|0.22|ENSG00000137628|chr4:168252634-168252634|T/-|frameshift_variant;ENSG00000137628|ENST00000393743|DDX60	30.317721548370564	0.32449924987115025	4				NaN	NaN	0	NaN	4108	2701	6806
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6812	20.835	NaN	5627.4	30	0	820.28	0.036				-1	 	0	69	531.2640884542816	530.2568119876815	1	531.2640380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4109	2701	6806
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6813	20.836	NaN	9560.5	30	0	2747	0.139	+			39903	STLTVAVKK	9	71	473.80035539285973	945.5861578525195	2	473.79986572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STLTVAVKK_	ENSG00000137261|ENST00000378214|KIAA0319;nc|ENSG00000137261|Q5VV43-2|KIAA0319;nc|ENSG00000137261|Q5VV43-3|KIAA0319;nc|ENSG00000137261|Q5VV43-4|KIAA0319	110.11987700582712	0.028875675806141952	4				NaN	NaN	0	NaN	4110	2701	6806
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6833	20.873	NaN	148820	30	0	26727	0.214	+			1515	AGAFAQALKL	10	123	330.5306061133533	988.5699889402599	3	330.53082275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AGAFAQALKL_	ENSG00000215912|ENST00000401095|TTC34;nc|ENSG00000215912|A8MYJ7|TTC34	51.33545320467046	0.4446945571623749	4				NaN	NaN	0	NaN	4127	2704	6832
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6834	20.877	NaN	18250	30	0	2295	0.106	+			47519	VQNGKHFKF	9	84	552.8014145207026	1103.588276108205	2	552.801513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VQNGKHFKF_	ENSG00000163586|ENST00000295834|FABP1	132.757866228626	0.013877640931359021	4				NaN	NaN	0	NaN	4128	2704	6832
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6835	20.879	NaN	10005	30	0	3574.1	0.106			+	45699	VAAISFRY	8	61	463.75784913997904	925.5011453467581	2	463.7574157714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VAAISFRY_	REV__ENSG00000047936|ENST00000368507|ROS1;REV__nc|ENSG00000047936|P08922|ROS1;REV__ROS1|p.L1167*|1|0.19|ENSG00000047936|chr6:117359957-117359957|A/-|frameshift_variant;REV__ROS1|p.L1167Ffs*26|1|0.27|ENSG00000047936|chr6:117359956-117359957|-/A|frameshift_variant;REV__ROS1|p.N1247Mfs*14|1|0.11|ENSG00000047936|chr6:117357918-117357918|T/-|frameshift_variant;REV__ROS1|p.N1821Tfs*2|1|0.44|ENSG00000047936|chr6:117326319-117326319|T/-|frameshift_variant;REV__ROS1|p.Y363Lfs*25|1|0.38|ENSG00000047936|chr6:117394238-117394239|-/A|frameshift_variant	33.51558372728122	0.7005509609380386	4				NaN	NaN	0	NaN	4129	2704	6832
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6836	20.881	NaN	16616	30	0	1505.9	0.106	+			50776	YEKRMATEV	9	76	563.7815501874804	1125.5485474417608	2	563.7830810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YEKRMATEV_	ENSG00000137154|ENST00000380394|RPS6;ENST00000497406.2_1_12:59414000-59414099:+|nuORF	80.45461616416974	0.09558281504443908	4				NaN	NaN	0	NaN	4130	2704	6832
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6837	20.882	NaN	5542.7	30	0	1308.8	0.106	+			13425	GLGRATAPGF	10	57	473.76019287109375	NaN	0	473.76019287109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GLGRATAPGF_	ENST00000574946.5_1_17:6025924-6026050:+|nuORF	32.81241826257853	0.3924360933802784	4				NaN	NaN	0	NaN	4131	2704	6832
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6838	20.884	NaN	4345.1	30	0	940.41	0.106			+	13376	GLASFCLAW	9	62	484.2397766113281	NaN	0	484.2397766113281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GLASFCLAW_	REV__ENSG00000174945|ENST00000683327|AMZ1	57.81127852772723	0.15865383123342353	4				NaN	NaN	0	NaN	4132	2704	6832
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6839	20.886	NaN	18701	30	0	2352	0.038	+			44899	TTYPQTTIRK	10	74	604.8352473088559	1207.6559416845116	2	604.83544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TTYPQTTIRK_	ENSG00000124429|ENST00000262753|POF1B;nc|ENSG00000124429|Q8WVV4-1|POF1B;nc|ENSG00000124429|Q8WVV4-3|POF1B	80.45461616416974	0.1919067876629769	4				NaN	NaN	0	NaN	4133	2704	6832
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6857	20.923	NaN	27815	30	0	5219.1	0.214	+			12279	GAYDGKFEK	9	90	507.74838050597936	1013.4822080787587	2	507.7481689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GAYDGKFEK_	ENSG00000196363|ENST00000358625|WDR5;WDR5|p.V217Cfs*4|5|0.4|ENSG00000196363|chr9:134154476-134154476|C/-|frameshift_variant	142.36107225718385	0.009372392051035914	4				NaN	NaN	0	NaN	4148	2707	6856
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6858	20.926	NaN	15520	30	0	5174	0.106	+			12280	GAYDGKFEK	9	97	338.8343255924758	1013.4811473776274	3	338.83447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GAYDGKFEK_	ENSG00000196363|ENST00000358625|WDR5;WDR5|p.V217Cfs*4|5|0.4|ENSG00000196363|chr9:134154476-134154476|C/-|frameshift_variant	39.252832667884924	0.4290233611298554	4				NaN	NaN	0	NaN	4149	2707	6856
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6859	20.929	NaN	5204.6	30	0	791.3	0.106			+	7930	DSHNSAAF	8	65	424.67995312205704	847.3453533109141	2	424.6801452636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DSHNSAAF_	REV__ENSG00000147255|ENST00000361420|IGSF1;REV__nc|ENSG00000147255|Q8N6C5-2|IGSF1;REV__nc|ENSG00000147255|Q8N6C5-4|IGSF1	50.0245360154114	0.5941082100236891	4				NaN	NaN	0	NaN	4150	2707	6856
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6860	20.93	NaN	3594.1	30	0	1241.2	0.106	+			21287	KLQVSKCI	8	64	459.77392578125	NaN	0	459.77392578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KLQVSKCI_	nc|ENSG00000117226|Q9H0R5-4|GBP3	51.33545320467046	1.7418937515398478	4				NaN	NaN	0	NaN	4151	2707	6856
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6861	20.932	NaN	3814.9	30	0	1516.5	0.106				-1	 	0	59	384.7716622169072	767.5287715006144	2	384.7720642089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4152	2707	6856
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6862	20.934	NaN	2267.3	30	0	292.25	0.034	+			11795	FSQISTIR	8	52	476.2666320800781	NaN	0	476.2666320800781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FSQISTIR_	ENST00000431090.1_1_22:19435446-19435635:+|nuORF	37.81151784470057	1.7418937515398478	4				NaN	NaN	0	NaN	4153	2707	6856
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6863	20.935	NaN	3763	30	0	955.08	0.14	+			31429	QKNVKLSTE	9	60	523.7960815429688	NaN	0	523.7960815429688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QKNVKLSTE_	ENSG00000102854|ENST00000545450|MSLN;nc|ENSG00000102854|Q13421-2|MSLN;nc|ENSG00000102854|Q13421-4|MSLN;nc|ENSG00000102854|Q13421|MSLN	54.776311868738084	0.17377682019723872	4				NaN	NaN	0	NaN	4154	2707	6856
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6882	20.974	NaN	310620	30	0	48710	0.145	+			14557	GTFGGLGSKSK	11	99	519.782562879054	NaN	0	519.7825317382812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTFGGLGSKSK_	ENSG00000124942|ENST00000378024|AHNAK	153.1020116777495	2.9724263753307507E-07	4				NaN	NaN	0	NaN	4170	2710	6881
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6883	20.976	NaN	13624	30	0	3268.6	0.106	+			49369	VVSSVVKVK	9	67	472.8106401363634	943.6067273395269	2	472.8102722167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVSSVVKVK_	ENSG00000100722|ENST00000251038|ZC3H14;nc|ENSG00000100722|Q6PJT7-10|ZC3H14;nc|ENSG00000100722|Q6PJT7-11|ZC3H14;nc|ENSG00000100722|Q6PJT7-2|ZC3H14;nc|ENSG00000100722|Q6PJT7-3|ZC3H14;nc|ENSG00000100722|Q6PJT7-4|ZC3H14;nc|ENSG00000100722|Q6PJT7-5|ZC3H14;nc|ENSG00000100722|Q6PJT7-9|ZC3H14;ZC3H14|p.K307Nfs*48|1|0.26|ENSG00000100722|chr14:88574746-88574746|A/-|frameshift_variant	110.11987700582712	0.028875675806141952	4				NaN	NaN	0	NaN	4171	2710	6881
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6884	20.978	NaN	6978.9	30	0	2579.2	0.106	+			15260	GTTGAVLGQK	10	62	466.2641834180132	930.5138139028264	2	466.26361083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTTGAVLGQK_	ENSG00000198643|ENST00000358781|FAM3D;FAM3D|p.G139Vfs*16|1|0.28|ENSG00000198643|chr3:58637183-58637183|C/-|frameshift_variant	101.25262130126117	0.07397688119410509	4				NaN	NaN	0	NaN	4172	2710	6881
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6885	20.98	NaN	16107	30	0	8013.9	0.106				-1	 	0	67	545.7832374376666	1089.551921942133	2	545.7832641601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4173	2710	6881
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6886	20.982	NaN	5260.7	30	0	1674.4	0.106			+	-1	SKDCFQCP	8	59	492.6992695153073	983.3839860974147	2	492.6990966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_SKDCFQC(Carbamidomethyl (C))P_	REV__ENSG00000102935|ENST00000563137|ZNF423;REV__ENSG00000198795|ENST00000361524|ZNF521;REV__nc|ENSG00000102935|Q2M1K9-2|ZNF423;REV__nc|ENSG00000102935|Q2M1K9|ZNF423;REV__ZNF423|p.Q394Rfs*36|1|0.13|ENSG00000102935|chr16:49637973-49637973|C/-|frameshift_variant;REV__ZNF521|p.G1058Afs*24|1|0.28|ENSG00000198795|chr18:25224745-25224745|C/-|frameshift_variant;REV__ZNF521|p.T1305*|1|0.14|ENSG00000198795|chr18:25062735-25062736|-/TA|frameshift_variant	40.5726180659479	0.6527593143185008	4				NaN	NaN	0	NaN	4174	2710	6881
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6887	20.984	NaN	7245.2	30	0	1311.2	0.106			+	43900	TNGPCSVCNNK	11	64	568.7434489662148	1135.4723449992296	2	568.743408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TNGPCSVCNNK_	REV__ENSG00000175356|ENST00000649792|SCUBE2;REV__nc|ENSG00000175356|Q9NQ36-2|SCUBE2;REV__nc|ENSG00000175356|Q9NQ36-3|SCUBE2;REV__nc|ENSG00000175356|Q9NQ36|SCUBE2	26.063383197487333	0.7164075632144343	4				NaN	NaN	0	NaN	4175	2710	6881
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6888	20.986	NaN	3616.5	30	0	691.51	0.034			+	17160	HTGSQLKCP	9	48	485.7425972149158	NaN	0	485.74249267578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HTGSQLKCP_	REV__ENSG00000102265|ENST00000218388|TIMP1	30.503639358989545	0.3235605894931338	4				NaN	NaN	0	NaN	4176	2710	6881
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6906	21.021	NaN	8944.6	30	0	3589	0.215	+			20718	KGSLLTDIKL	10	69	363.2287079228607	1086.664294368782	3	363.22882080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KGSLLTDIKL_	ENSG00000138771|ENST00000296043|SHROOM3	50.033510581677724	0.4566913063131936	4				NaN	NaN	0	NaN	4191	2713	6905
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6907	21.025	NaN	10561	30	0	1075.6	0.106	+			20398	KETEIVKKL	9	71	544.3397630520197	1086.6649731708394	2	544.3400268554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KETEIVKKL_	ENSG00000115816|ENST00000234170|CEBPZ	218.9424138723421	1.7586768943460236E-08	4				NaN	NaN	0	NaN	4192	2713	6905
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6908	21.027	NaN	4243.6	30	0	602.3	0.106			+	-1	VCCNSGLGPHE	11	59	586.74658203125	NaN	0	586.74658203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_VC(Carbamidomethyl (C))CNSGLGPHE_	REV__ENSG00000153684|ENST00000526619|GOLGA8F;REV__ENSG00000175265|ENST00000359187|GOLGA8A;REV__ENSG00000178115|ENST00000562783|GOLGA8Q;REV__ENSG00000179938|ENST00000567927|GOLGA8J;REV__ENSG00000183629|ENST00000525590|GOLGA8G;REV__ENSG00000186399|ENST00000327271|GOLGA8R;REV__ENSG00000188626|ENST00000563027|GOLGA8M;REV__ENSG00000206127|ENST00000509311|GOLGA8O;REV__ENSG00000215252|ENST00000683415|GOLGA8B;REV__ENSG00000232653|ENST00000448387|GOLGA8N;REV__ENSG00000249931|ENST00000512626|GOLGA8K;REV__ENSG00000261247|ENST00000569052|GOLGA8T;REV__ENSG00000261794|ENST00000566740|GOLGA8H;REV__ENST00000446144.2_1_15:20773467-20778061:+|nuORF;REV__nc|ENSG00000175265|A7E2F4|GOLGA8A;REV__nc|ENSG00000181984|A6NN73|GOLGA8CP;REV__nc|ENSG00000215252|A8MQT2-2|GOLGA8B;REV__nc|ENSG00000290359|Q0D2H9|GOLGA8DP;REV__nc|ENSG00000291004|A6NC78|GOLGA8IP	22.579656572578934	0.456735970842152	4				NaN	NaN	0	NaN	4193	2713	6905
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6909	21.029	NaN	4168.2	30	0	1158.3	0.106	+			20754	KGYGVATPK	9	66	460.7638341134599	919.5131152937198	2	460.763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KGYGVATPK_	ENSG00000125675|ENST00000620443|GRIA3;ENSG00000152578|ENST00000282499|GRIA4;nc|ENSG00000125675|P42263|GRIA3	71.87747018426188	0.13267044672804276	4				NaN	NaN	0	NaN	4194	2713	6905
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6910	21.031	NaN	3027.4	30	0	511.67	0.106	+			43625	TINGMLPSTE	10	48	531.7622680664062	NaN	0	531.7622680664062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TINGMLPSTE_	ENSG00000205693|ENST00000381273|MANSC4	34.172542307311794	0.38797011891751465	4				NaN	NaN	0	NaN	4195	2713	6905
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6911	21.032	NaN	3535.9	30	0	416.35	0.035			+	8143	EAADLKVKK	9	55	501.3026906520358	NaN	0	501.30279541015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EAADLKVKK_	REV__ENST00000415681.1_1_6:55804812-55805085:-|nuORF	55.50420428727701	0.16876052142120426	4				NaN	NaN	0	NaN	4196	2713	6905
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6912	21.033	NaN	4119.8	30	0	792.89	0.142				-1	ASCCEGIYNQ	10	52	572.7249002209917	1143.4352475087833	2	572.7254638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_ASC(Carbamidomethyl (C))CEGIYNQ_	ENST00000481551.5_1_7:92158186-92158869:+|nuORF	24.519189625965996	0.6795976720565101	4				NaN	NaN	0	NaN	4197	2713	6905
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6930	21.072	NaN	7699.3	30	0	2284.3	0.214			+	13637	GMLMVLLLT	9	83	336.1941052816153	1005.5604864450459	3	336.1939697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_GMLM(Oxidation (M))VLLLT_	REV__LRRTM4|p.T28M|1|0.3|ENSG00000176204|chr2:77519786-77519786|G/A|missense_variant	40.77816245573522	0.41113185337114944	4				NaN	NaN	0	NaN	4212	2716	6929
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6931	21.075	NaN	6528.9	30	0	808.35	0.106			+	19894	KEEVKSLK	8	74	480.78981825223934	959.5650835712787	2	480.78948974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEEVKSLK_	REV__ENSG00000271321|ENST00000470691|CTAGE6	148.04295825190792	0.24280381333290152	4				NaN	NaN	0	NaN	4213	2716	6929
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6932	21.077	NaN	3802.5	30	0	655.59	0.106	+			4890	ATQEAFMKR	9	66	541.2765502929688	NaN	0	541.2765502929688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATQEAFMKR_	ENSG00000136872|ENST00000647789|ALDOB	56.43379154798735	0.16452882468284893	4				NaN	NaN	0	NaN	4214	2716	6929
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6933	21.079	NaN	4142.8	30	0	410.56	0.106			+	43493	TGPTVVFLR	9	77	330.5306061133533	988.5699889402599	3	330.5307312011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TGPTVVFLR_	REV__ENSG00000119227|ENST00000412723|PIGZ	24.20275056022122	0.577060078256802	4				NaN	NaN	0	NaN	4215	2716	6929
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6934	21.081	NaN	2337.5	30	0	319.85	0.106				-1	 	0	58	392.769439970954	783.524327008708	2	392.76971435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4216	2716	6929
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6935	21.083	NaN	7729.8	30	0	2612.3	0.037	+			24969	LLAVIEEQHK	10	73	590.3404110485027	1178.6662691638053	2	590.3400268554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LLAVIEEQHK_	ENSG00000157637|ENST00000374759|SLC38A10;ENST00000539643.1_1_17:79219996-79220904:-|nuORF;nc|ENSG00000157637|Q9HBR0-3|SLC38A10	37.81151784470057	0.569310847604193	4				NaN	NaN	0	NaN	4217	2716	6929
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6936	21.083	NaN	9186.1	30	0	1472	0.145	+			21789	KQVCFDIYLLI	11	81	677.8736927167727	NaN	0	677.8734130859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KQVCFDIYLLI_	ENST00000370982.3_1_1:68168948-68169056:-|nuORF	53.59686742100583	0.28948468610734834	4				NaN	NaN	0	NaN	4218	2716	6929
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6954	21.122	NaN	25560	30	0	4228.6	0.215			+	29801	PKAWFERY	8	81	548.7828484643876	1095.551143995575	2	548.7825927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PKAWFERY_	REV__ENSG00000181061|ENST00000321331|HIGD1A;REV__ENST00000470543.1_1_3:42826765-42845976:-|nuORF;REV__nc|ENSG00000181061|Q9Y241-2|HIGD1A	65.80317337860623	0.44433089765398776	4				NaN	NaN	0	NaN	4233	2719	6953
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6955	21.125	NaN	9297	30	0	651.83	0.106			+	25750	LSAARKLSAP	10	76	507.30884698336666	1012.6031410335333	2	508.3106994628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSAARKLSAP_	REV__ENST00000423764.5_3_1:3656896-3659715:-|nuORF	42.33807565288922	0.5276008846745733	4				NaN	NaN	0	NaN	4234	2719	6953
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6956	21.127	NaN	11341	30	0	1918.6	0.106	+			20548	KFNKINYTL	9	72	570.824351240933	1139.6341495486658	2	570.8245239257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KFNKINYTL_	tr|U7SMP1|U7SMP1_FUSNUNodBhomologydomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01766PE=4SV=1	47.657333605630114	0.33044192980041115	4				NaN	NaN	0	NaN	4235	2719	6953
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6957	21.129	NaN	14016	30	0	5583.7	0.106			+	44150	TQLGEINKIT	10	67	558.8172157579728	1115.6198785827455	2	558.8167724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TQLGEINKIT_	REV__ENSG00000131951|ENST00000570145|LRRC9;REV__nc|ENSG00000131951|Q6ZRR7-2|LRRC9;REV__nc|ENSG00000131951|Q6ZRR7|LRRC9	70.8162118820467	0.27065172005956	4				NaN	NaN	0	NaN	4236	2719	6953
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6958	21.131	NaN	12914	30	0	2918.7	0.106			+	-1	PEMPCIYDTS	10	67	614.7461767038774	1227.4778004745547	2	614.7453002929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C),Oxidation (M)	_PEM(Oxidation (M))PC(Carbamidomethyl (C))IYDTS_	REV__ENSG00000166387|ENST00000299492|PPFIBP2;REV__nc|ENSG00000166387|Q8ND30-2|PPFIBP2;REV__nc|ENSG00000166387|Q8ND30-3|PPFIBP2	34.172542307311794	0.6007644933930345	4				NaN	NaN	0	NaN	4237	2719	6953
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6959	21.133	NaN	3083.3	30	0	421.36	0.106	+			31648	QMTRSLASP	9	65	495.75406464126655	989.4935763493331	2	495.7534484863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QMTRSLASP_	ENSG00000100099|ENST00000398145|HPS4;ENST00000429411.5_1_22:26849201-26866860:-|nuORF;ENST00000439453.5_1_22:26849201-26866860:-|nuORF;ENST00000464362.5_1_22:26849201-26861668:-|nuORF;ENST00000466781.5_1_22:26849201-26862270:-|nuORF;ENST00000496385.5_1_22:26849136-26861668:-|nuORF;nc|ENSG00000100099|Q9NQG7-2|HPS4;nc|ENSG00000100099|Q9NQG7-3|HPS4;nc|ENSG00000100099|Q9NQG7-4|HPS4	39.252832667884924	0.4290233611298554	4				NaN	NaN	0	NaN	4238	2719	6953
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6960	21.135	NaN	7962.4	30	0	876.85	0.037			+	-1	MKPTVNSSFC	10	71	585.7651930872727	1169.5158332413453	2	585.764404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_MKPTVNSSFC(Carbamidomethyl (C))_	REV__ENSG00000150269|ENST00000279791|OR5M9;REV__ENSG00000181371|ENST00000327216|OR5M8;REV__OR5M3|p.W70C|1|0.31|ENSG00000174937|chr11:56470288-56470288|C/G|missense_variant	62.107414245175825	0.3466735403679669	4				NaN	NaN	0	NaN	4239	2719	6953
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6978	21.17	NaN	100470	30	0	43113	0.146			+	41324	SVLRGLELTE	10	61	372.8799055274149	1115.6178871824447	3	372.8802185058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVLRGLELTE_	REV__ENSG00000183632|ENST00000398682|TP53TG3;REV__ENSG00000205456|ENST00000398664|TP53TG3D;REV__ENSG00000205457|ENST00000561509|TP53TG3C;REV__ENSG00000261509|ENST00000341305|TP53TG3B;REV__ENSG00000275034|ENST00000623491|TP53TG3E;REV__ENSG00000278848|ENST00000623042|TP53TG3F;REV__nc|ENSG00000278848|Q9ULZ0-1|TP53TG3;REV__nc|ENSG00000278848|Q9ULZ0-3|TP53TG3	31.529811441608018	0.6223461015008678	4				NaN	NaN	0	NaN	4254	2722	6977
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6979	21.173	NaN	18706	30	0	2819	0.106			+	37896	SPAAYLIGR	9	75	474.269171366467	946.523789799734	2	474.2689208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SPAAYLIGR_	REV__CD19|p.Q512Sfs*67|1|0.34|ENSG00000177455|chr16:28938718-28938718|C/-|frameshift_variant	63.30626980617807	0.18605348971131092	4				NaN	NaN	0	NaN	4255	2722	6977
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6980	21.175	NaN	21673	30	0	5632.5	0.106	+			6451	AVYGGFKSK	9	71	478.7636985040216	955.5128440748432	2	478.7635192871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVYGGFKSK_	ENSG00000196616|ENST00000305046|ADH1B;nc|ENSG00000196616|P00325-2|ADH1B	132.757866228626	0.013877640931359021	4				NaN	NaN	0	NaN	4256	2722	6977
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6981	21.177	NaN	12012	30	0	1069.5	0.106	+			39490	STFIGRAAAK	10	78	511.29336801959903	1020.5721831059981	2	511.293212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STFIGRAAAK_	ENSG00000101361|ENST00000329276|NOP56;ENST00000466447.5_1_20:2636822-2638033:+|nuORF;ENST00000490753.1_1_20:2637050-2637903:+|nuORF;ENST00000492135.5_1_20:2636822-2638937:+|nuORF	104.01359247289065	0.06577755598965461	4				NaN	NaN	0	NaN	4257	2722	6977
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6982	21.178	NaN	38102	30	0	3751.2	0.106	+			8343	EAKSTMICMNG	11	87	621.2690952910164	1240.5236376488326	2	621.2698974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_EAKSTMIC(Carbamidomethyl (C))MNG_	ENST00000369393.7_1_6:90513083-90513194:-|nuORF	96.0336014099291	0.0740748020614995	4				NaN	NaN	0	NaN	4258	2722	6977
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6983	21.18	NaN	9117.7	30	0	1678.2	0.106			+	18222	INKISYFTI	9	87	366.87667840566866	NaN	0	366.87677001953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_INKISYFTI_	REV__tr|U7STU9|U7STU9_FUSNUN-acetyltransferasedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00990PE=4SV=1	31.529811441608018	0.3183796599642538	4				NaN	NaN	0	NaN	4259	2722	6977
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	6984	21.182	NaN	8731.1	30	0	844.42	0.035			+	48563	VTPSKIVTK	9	93	324.87433005292274	971.6011607589683	3	324.8744812011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VTPSKIVTK_	REV__ENSG00000183354|ENST00000399933|KIAA2026;REV__KIAA2026|p.I903Tfs*10|1|0.06|ENSG00000183354|chr9:5923288-5923289|-/GAAAGTGATG|frameshift_variant;REV__KIAA2026|p.K1017Hfs*3|1|0.03|ENSG00000183354|chr9:5922948-5922949|-/CAAATGG|frameshift_variant	45.97224482568171	0.3502073465782774	4				NaN	NaN	0	NaN	4260	2722	6977
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7002	21.218	NaN	18023	30	0	7231.9	0.214			+	24385	LFTIRNHSL	9	92	367.54497213339147	1099.6130870003744	3	367.5450744628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LFTIRNHSL_	REV__ENSG00000171509|ENST00000307765|RXFP1;REV__nc|ENSG00000171509|Q9HBX9-2|RXFP1;REV__nc|ENSG00000171509|Q9HBX9-4|RXFP1;REV__nc|ENSG00000171509|Q9HBX9-5|RXFP1;REV__RXFP1|p.F645Lfs*2|1|0.16|ENSG00000171509|chr4:158648673-158648673|T/-|frameshift_variant	30.503639358989545	0.5181749237905803	4				NaN	NaN	0	NaN	4275	2725	7001
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7003	21.222	NaN	9422.9	30	0	806.5	0.106				-1	 	0	75	492.26668305402524	491.25940658742525	1	492.2665710449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4276	2725	7001
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7004	21.224	NaN	17923	30	0	5831.8	0.106				-1	SATACRWR	8	61	504.24623905778014	1006.4779251823603	2	504.24615478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SATAC(Carbamidomethyl (C))RWR_	ENST00000314980.4_1_19:39281369-39282319:+|nuORF;LGALS7|p.R54Gfs*80|1|0.41|ENSG00000205076|chr19:38771966-38771966|G/-|frameshift_variant	40.5726180659479	0.6527593143185008	4				NaN	NaN	0	NaN	4277	2725	7001
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7005	21.226	NaN	9373.2	30	0	1901.4	0.106	+			42474	TAMSERALAQK	11	70	603.319136947554	NaN	0	603.3191528320312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TAMSERALAQK_	ENSG00000159140|ENST00000356577|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-4|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-7|SON;nc|ENSG00000159140|P18583-9|SON	84.81729255234993	0.05867333576320435	4				NaN	NaN	0	NaN	4278	2725	7001
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7006	21.227	NaN	10683	30	0	1341.8	0.106	+			42649	TAVIDHHNY	9	79	535.2567701766287	1068.4989874200573	2	535.2568969726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TAVIDHHNY_	ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656-2|DDOST;nc|ENSG00000244038|P39656-3|DDOST;nc|ENSG00000244038|P39656|DDOST	131.61620852596164	0.014413238321579053	4				NaN	NaN	0	NaN	4279	2725	7001
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7007	21.229	NaN	11101	30	0	2100.8	0.106	+			18989	IVSVEVFDE	9	70	518.764556518157	1035.5145601031138	2	518.7642211914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IVSVEVFDE_	tr|U7T240|U7T240_FUSNUUDP-N-acetylenolpyruvoylglucosaminereductaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=murBPE=3SV=1	45.9519527083369	0.35044536499095585	4				NaN	NaN	0	NaN	4280	2725	7001
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7008	21.231	NaN	2200.2	30	0	654.75	0.031	+			38631	SSHGLAAL	8	51	378.20562360050815	754.3966942678163	2	378.2058410644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSHGLAAL_	ENSG00000168216|ENST00000649934|LMBRD1;nc|ENSG00000168216|Q9NUN5-2|LMBRD1;nc|ENSG00000168216|Q9NUN5-3|LMBRD1	21.70233525837049	0.7917639344264583	4				NaN	NaN	0	NaN	4281	2725	7001
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7028	21.267	NaN	31670	30	0	7487.1	0.214	+			5697	AVFASEVKK	9	83	489.78470824711206	977.5548635610241	2	489.7842712402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVFASEVKK_	ENSG00000105202|ENST00000221801|FBL;FBL|p.K318Rfs*2|1|0.09|ENSG00000105202|chr19:39834553-39834553|G/-|frameshift_variant	158.07458414430337	0.004987072822166904	4				NaN	NaN	0	NaN	4298	2728	7027
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7029	21.27	NaN	31933	30	0	10078	0.106			+	20569	KFSSTSTASY	10	86	539.7564219660231	1077.4982909988462	2	539.7562866210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KFSSTSTASY_	REV__ENSG00000113163|ENST00000643780|CERT1;REV__nc|ENSG00000113163|Q9Y5P4-2|CERT1;REV__nc|ENSG00000113163|Q9Y5P4-3|CERT1	51.19269402634007	0.44601001148513897	4				NaN	NaN	0	NaN	4299	2728	7027
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7030	21.272	NaN	6278.7	30	0	1056.2	0.106			+	46048	VCFGEYRDN	9	61	551.7357433438086	1101.4569337544172	2	551.735595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VCFGEYRDN_	REV__ENSG00000149403|ENST00000527524|GRIK4;REV__ENST00000533291.5_1_11:120531027-120833419:+|nuORF;REV__GRIK4|p.T481Rfs*6|1|0.57|ENSG00000149403|chr11:120905452-120905468|AACGGCACCTGGACGGG/-|frameshift_variant	30.503639358989545	0.5181749237905803	4				NaN	NaN	0	NaN	4300	2728	7027
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7031	21.274	NaN	5315.2	30	0	1185.2	0.106				-1	AGYGTCNCFP	10	71	545.2093368895565	1088.404120845913	2	545.2094116210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_AGYGTCNC(Carbamidomethyl (C))FP_	ENSG00000165731|ENST00000355710|RET;nc|ENSG00000165731|P07949-2|RET	28.081489160057373	0.6505064946289502	4				NaN	NaN	0	NaN	4301	2728	7027
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7032	21.276	NaN	6769	30	0	1487	0.106			+	16941	HPNMTEKLSS	10	65	572.2763821924449	1142.5382114516897	2	572.2761840820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HPNMTEKLSS_	REV__ENSG00000198792|ENST00000361906|TMEM184B;REV__ENST00000436674.5_1_22:38617478-38642853:-|nuORF;REV__ENST00000504337.1_1_22:38617478-38618844:-|nuORF	49.536043120802724	0.461275219792494	4				NaN	NaN	0	NaN	4302	2728	7027
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7033	21.278	NaN	4285.5	30	0	386.41	0.035	+			38643	SSIAQSIHR	9	66	499.7727869931897	997.5310210531794	2	499.7724914550781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSIAQSIHR_	CADPS|p.L1098Vfs*5|1|0.37|ENSG00000163618|chr3:62478299-62478300|-/T|frameshift_variant;CADPS2|p.D1011Nfs*3|1|0.04|ENSG00000081803|chr7:122388716-122388717|-/ATGTATT|frameshift_variant;CADPS2|p.N1185Tfs*15|1|0.4|ENSG00000081803|chr7:122345632-122345632|T/-|frameshift_variant;ENSG00000081803|ENST00000449022|CADPS2;ENSG00000163618|ENST00000383710|CADPS;ENST00000463002.2_1_3:62463934-62477992:-|nuORF;nc|ENSG00000081803|Q86UW7-2|CADPS2;nc|ENSG00000081803|Q86UW7-3|CADPS2;nc|ENSG00000163618|Q9ULU8-2|CADPS;nc|ENSG00000163618|Q9ULU8-3|CADPS;nc|ENSG00000163618|Q9ULU8-4|CADPS	56.43379154798735	0.2433427591689151	4				NaN	NaN	0	NaN	4303	2728	7027
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7034	21.278	NaN	1779.5	30	0	130.65	0.138			+	13126	GGKGAHKK	8	65	391.7350507338252	781.4555485344504	2	391.7351379394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GGKGAHKK_	REV__COL25A1|p.G497Efs*14|2|0.4|ENSG00000188517|chr4:108846166-108846166|T/-|frameshift_variant;REV__ENSG00000188517|ENST00000399132|COL25A1;REV__nc|ENSG00000188517|Q9BXS0-2|COL25A1;REV__nc|ENSG00000188517|Q9BXS0-3|COL25A1	8.822329726475273	0.7821568878176242	4				NaN	NaN	0	NaN	4304	2728	7027
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7052	21.318	NaN	8925.5	30	0	899.23	0.214	+			40613	SVAKIAQYK	9	72	504.2982040392306	1006.5818551452612	2	504.298095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVAKIAQYK_	ENSG00000138750|ENST00000264883|NUP54;ENST00000504173.1_1_4:77045750-77069514:-|nuORF;ENST00000508465.5_1_4:77038865-77051838:-|nuORF;ENST00000508604.5_1_4:77039101-77051958:-|nuORF;nc|ENSG00000138750|Q7Z3B4-3|NUP54	106.68306549817024	0.032382560583716295	4				NaN	NaN	0	NaN	4319	2731	7051
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7053	21.321	NaN	12865	30	0	984.78	0.106	+			30264	PTDGVVRPPPG	11	78	546.294065540865	1090.5735781485298	2	546.2951049804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PTDGVVRPPPG_	ENST00000532940.5_1_8:144921262-144922356:-|nuORF	71.87747018426188	0.2200878389444539	4				NaN	NaN	0	NaN	4320	2731	7051
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7054	21.323	NaN	4104.6	30	0	796.91	0.106			+	8313	EAITQRARQ	9	65	536.7950733035484	1071.5755936738967	2	536.7953491210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EAITQRARQ_	REV__AKAP9|p.L1203Yfs*16|1|0.24|ENSG00000127914|chr7:92014319-92014319|T/-|frameshift_variant;REV__AKAP9|p.Q3083Nfs*28|1|0.15|ENSG00000127914|chr7:92089389-92089390|-/TGAATATCAAGCAGCTATGGAATGCC|frameshift_variant;REV__AKAP9|p.T1942Lfs*3|3|0.18|ENSG00000127914|chr7:92062328-92062328|A/-|frameshift_variant;REV__ENSG00000127914|ENST00000356239|AKAP9;REV__ENST00000493453.1_1_7:91570251-91670224:+|nuORF;REV__nc|ENSG00000127914|Q99996-1|AKAP9;REV__nc|ENSG00000127914|Q99996-3|AKAP9;REV__nc|ENSG00000127914|Q99996-4|AKAP9;REV__nc|ENSG00000127914|Q99996-5|AKAP9;REV__nc|ENSG00000127914|Q99996-6|AKAP9	51.19269402634007	0.2889735674168909	4				NaN	NaN	0	NaN	4321	2731	7051
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7055	21.325	NaN	2231.9	30	0	344.71	0.106	+			27511	MNLDKQTT	8	47	475.7344037233967	949.4542545135935	2	475.7343444824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MNLDKQTT_	ENSG00000205693|ENST00000381273|MANSC4	24.20275056022122	0.7724576178584145	4				NaN	NaN	0	NaN	4322	2731	7051
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7056	21.327	NaN	2192.9	30	0	282.31	0.106			+	50114	WHAPGPLY	8	49	470.73783426444254	939.4611155956851	2	471.808349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_WHAPGPLY_	REV__ENSG00000188906|ENST00000298910|LRRK2;REV__ENST00000479187.5_1_12:40692272-40758932:+|nuORF;REV__LRRK2|p.D1207N|1|0.2|ENSG00000188906|chr12:40303976-40303976|G/A|missense_variant;REV__LRRK2|p.K1328Rfs*8|1|0.21|ENSG00000188906|chr12:40308485-40308485|A/-|frameshift_variant;REV__LRRK2|p.N2261Kfs*9|1|0.28|ENSG00000188906|chr12:40356119-40356120|-/A|frameshift_variant;REV__LRRK2|p.R1639Gfs*15|1|0.59|ENSG00000188906|chr12:40320068-40320068|A/-|frameshift_variant;REV__LRRK2|p.R1639Kfs*13|1|0.36|ENSG00000188906|chr12:40320067-40320068|-/A|frameshift_variant	16.704963439144045	0.7946246187734944	4				NaN	NaN	0	NaN	4323	2731	7051
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7057	21.329	NaN	6974.9	30	0	2665.3	0.036			+	22085	KSLRAVEAKL	10	60	557.8516512358938	1113.6887495385874	2	557.8517456054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KSLRAVEAKL_	REV__ENSG00000128833|ENST00000261839|MYO5C;REV__MYO5C|p.L1151Wfs*19|1|0.17|ENSG00000128833|chr15:52223719-52223719|A/-|frameshift_variant	46.45678178249821	0.4896490706773647	4				NaN	NaN	0	NaN	4324	2731	7051
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7058	21.329	NaN	10119	30	0	1612.8	0.141	+			3145	ASHYIHIVK	9	66	534.303585889838	1066.592618846476	2	534.3048095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASHYIHIVK_	ENSG00000159921|ENST00000642385|GNE;nc|ENSG00000159921|Q9Y223-2|GNE;nc|ENSG00000159921|Q9Y223-3|GNE;nc|ENSG00000159921|Q9Y223-4|GNE;nc|ENSG00000159921|Q9Y223-5|GNE	116.90359126533652	0.02307425081617795	4				NaN	NaN	0	NaN	4325	2731	7051
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7076	21.368	NaN	166030	30	0	31487	0.155	+			40914	SVFQQGMKNK	10	98	583.8029554836745	1165.591358034149	2	583.8028564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVFQQGMKNK_	ENSG00000018625|ENST00000361216|ATP1A2;ENSG00000105409|ENST00000648268|ATP1A3;ENSG00000163399|ENST00000295598|ATP1A1;ENST00000479960.1_1_1:116943772-116944278:+|nuORF;nc|ENSG00000105409|P13637-2|ATP1A3;nc|ENSG00000105409|P13637-3|ATP1A3;nc|ENSG00000163399|P05023-3|ATP1A1;nc|ENSG00000163399|P05023-4|ATP1A1	167.93327368760816	0.004342583126626421	4				NaN	NaN	0	NaN	4340	2734	7075
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7077	21.37	NaN	35207	30	0	3767.4	0.106	+			48242	VTCSQVHFK	9	82	553.2766923180521	1104.5388317029042	2	553.2769775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_VTC(Carbamidomethyl (C))SQVHFK_	ENSG00000174442|ENST00000307897|ZWILCH;nc|ENSG00000174442|Q9H900-2|ZWILCH	138.06239232086	0.011389075116295402	4				NaN	NaN	0	NaN	4341	2734	7075
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7078	21.372	NaN	6346.2	30	0	1161.1	0.106	+			21415	KMSLKGTTVT	10	65	541.2983039094499	1080.5820548856998	2	541.29833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_KM(Oxidation (M))SLKGTTVT_	ENSG00000130706|ENST00000253003|ADRM1	54.722347961057174	0.4138398245444204	4				NaN	NaN	0	NaN	4342	2734	7075
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7079	21.374	NaN	11706	30	0	1549.7	0.106	+			4494	ATITDKEMLKK	11	71	639.3603310109041	1276.7061090886082	2	639.3602294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATITDKEMLKK_	ANKRD17|p.L2249Yfs*84|1|0.34|ENSG00000132466|chr4:73090884-73090884|G/-|frameshift_variant;ENSG00000132466|ENST00000358602|ANKRD17;ENST00000514252.1_1_4:73978989-74017230:-|nuORF;nc|ENSG00000132466|O75179-2|ANKRD17;nc|ENSG00000132466|O75179-6|ANKRD17;nc|ENSG00000132466|O75179-7|ANKRD17	134.38175178908594	0.0009546753189824793	4				NaN	NaN	0	NaN	4343	2734	7075
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7080	21.376	NaN	17992	30	0	3017.9	0.106	+			39624	STICKYYQK	9	82	595.7969231221068	1189.5792933110135	2	595.796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_STIC(Carbamidomethyl (C))KYYQK_	ENSG00000075975|ENST00000170447|MKRN2	118.74307786436346	0.02196067127630568	4				NaN	NaN	0	NaN	4344	2734	7075
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7081	21.378	NaN	9189.2	30	0	1551.2	0.106				-1	 	0	61	470.73783426444254	939.4611155956851	2	470.7372741699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4345	2734	7075
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7082	21.38	NaN	4663.2	30	0	426.67	0.034	+			32405	QVEGKNPVT	9	61	486.2612413547231	970.5079297762462	2	486.2610168457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QVEGKNPVT_	ENSG00000106028|ENST00000265304|SSBP1;ENST00000489378.5_1_7:141438966-141445458:+|nuORF	41.42661286455405	0.403525789677298	4				NaN	NaN	0	NaN	4346	2734	7075
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7100	21.417	NaN	10996	30	0	1843.5	0.214				-1	 	0	90	338.19744005894466	1011.570490777034	3	338.1976623535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4361	2737	7099
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7101	21.421	NaN	8710.3	30	0	989.64	0.106	+			27729	MQLGVHYSK	9	71	539.7714405156471	1077.528328098094	2	539.7716674804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_M(Oxidation (M))QLGVHYSK_	ENST00000430246.6_1_14:21731784-21731862:-|nuORF;ENST00000554969.5_1_14:21731484-21731862:-|nuORF	106.68306549817024	0.032382560583716295	4				NaN	NaN	0	NaN	4362	2737	7099
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7102	21.423	NaN	10623	30	0	992.37	0.106	+			34054	RSMEAHNILSK	11	73	643.3381508120983	1284.6617486909965	2	643.337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RSMEAHNILSK_	ENSG00000160075|ENST00000291386|SSU72;ENST00000378725.3_1_1:1480120-1509937:-|nuORF;nc|ENSG00000160075|Q9NP77-2|SSU72;SSU72|p.L82Ffs*8|1|0.34|ENSG00000160075|chr1:1544981-1544982|-/A|frameshift_variant	89.35639160576558	0.1014093944095153	4				NaN	NaN	0	NaN	4363	2737	7099
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7103	21.425	NaN	8511	30	0	995.3	0.106	+			28632	NLAHVEKVE	9	69	519.782562879054	NaN	0	519.8010864257812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NLAHVEKVE_	AGBL5|p.R813Gfs*68|1|0.4|ENSG00000084693|chr2:27069649-27069649|C/-|frameshift_variant;ENSG00000084693|ENST00000360131|AGBL5;ENST00000477136.5_1_2:27275826-27278122:+|nuORF;ENST00000489683.5_1_2:27275826-27279072:+|nuORF;nc|ENSG00000084693|Q8NDL9-2|AGBL5;nc|ENSG00000084693|Q8NDL9-3|AGBL5	34.172542307311794	0.30503706118289736	4				NaN	NaN	0	NaN	4364	2737	7099
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7104	21.426	NaN	9086.6	30	0	2307.8	0.106			+	10954	FDVWECSTI	9	64	550.2410575858709	1098.4675622385416	2	550.2412719726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FDVWECSTI_	REV__ENSG00000197181|ENST00000356766|PIWIL2;REV__ENST00000519884.1_1_8:22210459-22213015:+|nuORF	30.503639358989545	0.5181749237905803	4				NaN	NaN	0	NaN	4365	2737	7099
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7105	21.428	NaN	2597.4	30	0	439.96	0.034	+			48343	VTGIEELR	8	54	458.7579345703125	NaN	0	458.7579345703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTGIEELR_	CCDC18|p.N601Kfs*13|1|0.35|ENSG00000122483|chr1:93216715-93216716|-/A|frameshift_variant;ENSG00000122483|ENST00000690025|CCDC18;nc|ENSG00000122483|Q5T9S5-2|CCDC18;nc|ENSG00000122483|Q5T9S5|CCDC18	30.503639358989545	1.7418937515398478	4				NaN	NaN	0	NaN	4366	2737	7099
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7106	21.429	NaN	25824	30	0	4262.7	0.141	+			45263	TVQGKVFER	9	81	532.2984871191478	1062.5824213050955	2	532.2987060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TVQGKVFER_	ENSG00000090382|ENST00000261267|LYZ	136.5150327860613	0.012115003498012726	4				NaN	NaN	0	NaN	4367	2737	7099
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7124	21.468	NaN	11671	30	0	2936.9	0.214	+			39721	STIPTSRLK	9	72	501.8007165825875	1001.586880231975	2	501.80047607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STIPTSRLK_	ENSG00000070961|ENST00000428670|ATP2B1;nc|ENSG00000070961|P20020-1|ATP2B1;nc|ENSG00000070961|P20020-2|ATP2B1;nc|ENSG00000070961|P20020-4|ATP2B1;nc|ENSG00000070961|P20020-5|ATP2B1;nc|ENSG00000070961|P20020-6|ATP2B1	77.31757898189308	0.1091473830098891	4				NaN	NaN	0	NaN	4382	2740	7123
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7125	21.472	NaN	8084.1	30	0	796.36	0.106	+			43639	TIQSGEQPYK	10	68	575.7909939076873	NaN	0	575.791015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TIQSGEQPYK_	ENSG00000168653|ENST00000372969|NDUFS5	120.27252224102466	0.018905286673054526	4				NaN	NaN	0	NaN	4383	2740	7123
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7126	21.474	NaN	2954.7	30	0	260.57	0.106			+	48445	VTKVAKKTR	9	65	344.22918701171875	NaN	0	344.22918701171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTKVAKKTR_	REV__ENSG00000216937|ENST00000639629|CCDC7;REV__nc|ENSG00000216937|Q96M83-3|CCDC7;REV__nc|ENSG00000216937|Q96M83-4|CCDC7;REV__nc|ENSG00000216937|Q96M83-5|CCDC7	26.063383197487333	0.34597851983111116	4				NaN	NaN	0	NaN	4384	2740	7123
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7127	21.475	NaN	16077	30	0	2702.4	0.106	+			18138	ILITGLTNK	9	78	486.808187366401	971.601821799602	2	486.80767822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ILITGLTNK_	tr|U7SGS6|U7SGS6_FUSNUDNAtopoisomeraseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02306PE=3SV=1	76.7741389293348	0.11149722112137898	4				NaN	NaN	0	NaN	4385	2740	7123
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7128	21.477	NaN	9522.3	30	0	1472.8	0.106				-1	MNSSGFDPECE	11	58	636.7317435599236	1271.4489341866472	2	636.7313842773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_MNSSGFDPEC(Carbamidomethyl (C))E_	ENSG00000063127|ENST00000335875|SLC6A16;nc|ENSG00000063127|Q9GZN6-2|SLC6A16	24.519189625965996	0.7326048944360514	4				NaN	NaN	0	NaN	4386	2740	7123
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7129	21.479	NaN	5035.1	30	0	1116.9	0.036			+	37630	SLQFHVIKK	9	63	550.3351413699481	1098.6557298066962	2	550.2767944335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLQFHVIKK_	REV__CEP295|p.L2479Ffs*6|1|0.29|ENSG00000166004|chr11:93729651-93729651|A/-|frameshift_variant;REV__ENSG00000166004|ENST00000325212|CEP295;REV__nc|ENSG00000166004|Q9C0D2-2|CEP295;REV__nc|ENSG00000166004|Q9C0D2-3|CEP295;REV__nc|ENSG00000166004|Q9C0D2-4|CEP295	33.921630207806714	0.48623198279849766	4				NaN	NaN	0	NaN	4387	2740	7123
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7130	21.48	NaN	6590.2	30	0	1528	0.141	+			32675	RAELGSPWGP	10	63	535.2767077286835	NaN	0	535.2765502929688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RAELGSPWGP_	ENST00000450736.6_1_17:73085110-73089847:+|nuORF	39.252832667884924	0.37128895876774715	4				NaN	NaN	0	NaN	4388	2740	7123
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7148	21.519	NaN	15534	30	0	2104.5	0.214	+			5167	ATTAIAIHR	9	65	477.2800919727615	952.545631012323	2	477.2798156738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATTAIAIHR_	ENST00000520964.1_1_X:134185341-134186186:-|nuORF;ENST00000522309.1_1_X:134185341-134186138:-|nuORF	171.38481719736927	0.0025305361306121837	4				NaN	NaN	0	NaN	4403	2743	7147
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7149	21.523	NaN	12420	30	0	1964.5	0.106	+			886	AEHIESRTL	9	91	352.5206355476949	1054.5400772432847	3	352.5208435058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEHIESRTL_	ENSG00000147872|ENST00000276914|PLIN2;PLIN2|p.V348*|1|0.15|ENSG00000147872|chr9:19116520-19116520|C/-|frameshift_variant	62.107414245175825	0.1960472003779324	4				NaN	NaN	0	NaN	4404	2743	7147
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7150	21.525	NaN	11384	30	0	1644.2	0.106	+			3153	ASIDGCIKK	9	74	467.7552920906581	933.4960312481162	2	467.7548522949219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASIDGCIKK_	ENSG00000166750|ENST00000299977|SLFN5;nc|ENSG00000166750|Q08AF3-2|SLFN5;SLFN5|p.P698Lfs*21|1|0.46|ENSG00000166750|chr17:35265300-35265300|C/-|frameshift_variant;SLFN5|p.Q524Sfs*11|1|0.73|ENSG00000166750|chr17:35264609-35264609|C/-|frameshift_variant	115.49404669440601	0.023927554121326553	4				NaN	NaN	0	NaN	4405	2743	7147
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7151	21.526	NaN	10420	30	0	1583.1	0.106	+			27986	MVSAEISENRK	11	77	632.3219299991077	1262.6293070650154	2	632.32177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MVSAEISENRK_	ENSG00000143751|ENST00000272091|SDE2;nc|ENSG00000143751|Q6IQ49-2|SDE2;nc|ENSG00000143751|Q6IQ49-3|SDE2	93.44185321454538	0.08468467990978058	4				NaN	NaN	0	NaN	4406	2743	7147
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7152	21.528	NaN	45143	30	0	10510	0.106	+			48411	VTIKEGSQLK	10	89	551.8271883220526	1101.6398237109051	2	551.8270263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTIKEGSQLK_	ENSG00000100138|ENST00000401959|SNU13	141.91077491472637	0.010244635003291853	4				NaN	NaN	0	NaN	4407	2743	7147
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7153	21.53	NaN	6854.5	30	0	1110.3	0.037	+			32926	REAEETQSTL	10	73	582.2811303227764	1162.5477077123528	2	582.2810668945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_REAEETQSTL_	ENSG00000125844|ENST00000377813|RRBP1;nc|ENSG00000125844|Q9P2E9-3|RRBP1	43.650786325866115	0.5155049133366767	4				NaN	NaN	0	NaN	4408	2743	7147
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7154	21.531	NaN	4381.1	30	0	652.17	0.143	+			30803	QEALTVLGR	9	74	329.5255692048565	NaN	0	329.52545166015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QEALTVLGR_	ENST00000580953.5_1_17:80007881-80009420:-|nuORF;ENST00000583784.1_1_17:80007881-80008457:-|nuORF	30.317721548370564	0.32449924987115025	4				NaN	NaN	0	NaN	4409	2743	7147
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7172	21.569	NaN	10916	30	0	3732.1	0.214	+			32719	RALQCLFYL	9	62	563.8063272612974	1125.5981015893947	2	563.8065795898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RALQCLFYL_	ENSG00000184445|ENST00000333479|KNTC1;ENST00000436959.7_1_12:123087118-123101977:+|nuORF;nc|ENSG00000184445|P50748-2|KNTC1	25.57405402267927	0.5642445186134241	4				NaN	NaN	0	NaN	4424	2746	7171
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7173	21.572	NaN	13745	30	0	8031.4	0.106	+			41486	SVPADLSRPK	10	69	535.3038111844692	1068.5930694357382	2	535.3041381835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVPADLSRPK_	ENSG00000047849|ENST00000683076|MAP4;MAP4|p.R919Gfs*14|1|0.44|ENSG00000047849|chr3:47870917-47870917|G/-|frameshift_variant;MAP4|p.T960Qfs*35|1|0.3|ENSG00000047849|chr3:47869309-47869309|T/-|frameshift_variant;MAP4|p.V999*|1|0.25|ENSG00000047849|chr3:47867318-47867318|T/-|frameshift_variant;nc|ENSG00000047849|P27816-2|MAP4;nc|ENSG00000047849|P27816-4|MAP4;nc|ENSG00000047849|P27816-5|MAP4;nc|ENSG00000047849|P27816-6|MAP4;nc|ENSG00000047849|P27816|MAP4	50.033510581677724	0.4566913063131936	4				NaN	NaN	0	NaN	4425	2746	7171
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7174	21.574	NaN	11268	30	0	1809.9	0.106				-1	ISIPMCLSL	9	93	350.5171356275886	1048.5295774829658	3	350.51727294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_ISIPM(Oxidation (M))C(Carbamidomethyl (C))LSL_	ENSG00000089597|ENST00000356638|GANAB;nc|ENSG00000089597|Q14697-2|GANAB	45.97224482568171	0.3502073465782774	4				NaN	NaN	0	NaN	4426	2746	7171
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7175	21.576	NaN	6407.2	30	0	800.66	0.106				-1	MQSDREYKK	9	65	600.787591820066	1199.560630706932	2	600.7876586914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_M(Oxidation (M))QSDREYKK_	ENSG00000183091|ENST00000397345|NEB;ENSG00000183091|ENST00000397345|NEB;nc|ENSG00000183091|P20929-1|NEB;nc|ENSG00000183091|P20929-1|NEB;nc|ENSG00000183091|P20929-3|NEB;nc|ENSG00000183091|P20929-3|NEB;nc|ENSG00000183091|P20929-4|NEB;nc|ENSG00000183091|P20929-4|NEB;NEB|p.L4198Cfs*51|1|0.35|ENSG00000183091|chr2:151568357-151568357|G/-|frameshift_variant;NEB|p.L4198Cfs*51|1|0.35|ENSG00000183091|chr2:151568357-151568357|G/-|frameshift_variant;NEB|p.N2105D|1|0.08|ENSG00000183091|chr2:151656335-151656335|T/C|missense_variant;NEB|p.N3442Tfs*4|1|0.2|ENSG00000183091|chr2:151618297-151618297|T/-|frameshift_variant;NEB|p.N3442Tfs*4|1|0.2|ENSG00000183091|chr2:151618297-151618297|T/-|frameshift_variant	24.519189625965996	0.574102787014149	4				NaN	NaN	0	NaN	4427	2746	7171
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7176	21.578	NaN	9243.6	30	0	1516.8	0.106	+			41838	SVSTKLISK	9	74	481.79792537732976	961.5812978214595	2	481.7977294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVSTKLISK_	ENSG00000157741|ENST00000473989|UBN2;UBN2|p.G1191Efs*28|1|0.17|ENSG00000157741|chr7:139284473-139284473|G/-|frameshift_variant	66.96192283764107	0.15557981141143568	4				NaN	NaN	0	NaN	4428	2746	7171
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7177	21.58	NaN	7582.7	30	0	1450	0.038	+			21988	KSFDEQNVPK	10	75	596.3040721010116	1190.593591268823	2	596.3038330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KSFDEQNVPK_	ENSG00000197321|ENST00000355867|SVIL;nc|ENSG00000197321|O95425-2|SVIL;nc|ENSG00000197321|O95425-3|SVIL;nc|ENSG00000197321|O95425-4|SVIL;SVIL|p.M1863Dfs*18|1|0.28|ENSG00000197321|chr10:29471186-29471187|-/C|frameshift_variant;SVIL|p.M1863Wfs*44|8|0.39|ENSG00000197321|chr10:29471187-29471187|C/-|frameshift_variant;SVIL|p.N2095Kfs*36|1|0.25|ENSG00000197321|chr10:29462394-29462395|-/T|frameshift_variant	68.62578634547417	0.2885473079336931	4				NaN	NaN	0	NaN	4429	2746	7171
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7178	21.58	NaN	12472	30	0	3475.6	0.143	+			36941	SILKHLSAK	9	88	332.87804811216756	995.6123149367027	3	333.2123718261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SILKHLSAK_	ENSG00000109118|ENST00000332830|PHF12;ENST00000582436.5_1_17:27237055-27251401:-|nuORF;ENST00000582655.5_1_17:27237828-27251299:-|nuORF;nc|ENSG00000109118|Q96QT6-2|PHF12;nc|ENSG00000109118|Q96QT6-3|PHF12;nc|ENSG00000109118|Q96QT6-4|PHF12;nc|ENSG00000109118|Q96QT6-5|PHF12;PHF12|p.P882Qfs*30|1|0.22|ENSG00000109118|chr17:28906891-28906891|G/-|frameshift_variant	65.46538089061403	0.16805504838372562	4				NaN	NaN	0	NaN	4430	2746	7171
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7196	21.618	NaN	63996	30	0	7911.7	0.214				-1	 	0	99	581.3535886022925	1160.6926242713848	2	581.3533325195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4445	2749	7195
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7197	21.622	NaN	9127.8	30	0	584.03	0.106	+			18043	IIQAKTRSL	9	71	515.324771805541	1028.634990677882	2	515.324462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IIQAKTRSL_	ENSG00000197892|ENST00000524189|KIF13B;KIF13B|p.K1288Rfs*13|1|0.34|ENSG00000197892|chr8:29113530-29113530|T/-|frameshift_variant	90.60085204095205	0.06317133949006545	4				NaN	NaN	0	NaN	4446	2749	7195
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7198	21.624	NaN	5691.4	30	0	1412.9	0.106				-1	 	0	70	343.88518563049115	1028.6337274916734	3	343.8853454589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4447	2749	7195
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7199	21.626	NaN	8087	30	0	2549.3	0.106	+			17914	IGINAISRY	9	71	336.1941052816153	1005.5604864450459	3	336.194091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IGINAISRY_	ENSG00000196159|ENST00000394329|FAT4;FAT4|p.D3606Sfs*31|1|0.07|ENSG00000196159|chr4:125451831-125451832|-/AGTAAAGG|frameshift_variant;FAT4|p.E3388Gfs*4|1|0.35|ENSG00000196159|chr4:125451179-125451179|A/-|frameshift_variant;FAT4|p.E4539Rfs*31|1|0.12|ENSG00000196159|chr4:125490431-125490431|C/-|frameshift_variant;FAT4|p.K4477Rfs*15|1|0.36|ENSG00000196159|chr4:125490247-125490247|G/-|frameshift_variant;FAT4|p.K4532Efs*21|1|0.37|ENSG00000196159|chr4:125490410-125490411|-/G|frameshift_variant;FAT4|p.K4532Rfs*38|1|0.19|ENSG00000196159|chr4:125490411-125490411|G/-|frameshift_variant;FAT4|p.L3734Ffs*22|1|0.27|ENSG00000196159|chr4:125452211-125452212|-/T|frameshift_variant;FAT4|p.L3734Yfs*8|2|0.3|ENSG00000196159|chr4:125452212-125452212|T/-|frameshift_variant;FAT4|p.Q4906Rfs*14|1|0.49|ENSG00000196159|chr4:125491536-125491536|C/-|frameshift_variant;FAT4|p.T3555Pfs*6|1|0.21|ENSG00000196159|chr4:125451679-125451679|A/-|frameshift_variant;nc|ENSG00000196159|Q6V0I7-2|FAT4;nc|ENSG00000196159|Q6V0I7-3|FAT4;nc|ENSG00000196159|Q6V0I7|FAT4	23.04248740728303	0.5879033540491928	4				NaN	NaN	0	NaN	4448	2749	7195
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7200	21.628	NaN	17237	30	0	3802.3	0.106	+			39691	STIKFQMKK	9	72	555.8208568061389	1109.6271606790776	2	555.8206787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STIKFQMKK_	ENSG00000198755|ENST00000322203|RPL10A;ENST00000464112.5_1_6:35436546-35438524:+|nuORF;ENST00000472730.1_1_3:61728131-61728755:-|nuORF;ENST00000478340.2_1_6:35437033-35438524:+|nuORF	131.61620852596164	0.014413238321579053	4				NaN	NaN	0	NaN	4449	2749	7195
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7201	21.63	NaN	6956.3	30	0	1063.1	0.035	+			19705	KDSLSNGVPS	10	68	502.2561469088343	1002.4977408844686	2	502.25665283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KDSLSNGVPS_	ENSG00000163092|ENST00000409195|XIRP2;nc|ENSG00000163092|A4UGR9-2|XIRP2;nc|ENSG00000163092|A4UGR9|XIRP2	75.04331003522576	0.23611669241777622	4				NaN	NaN	0	NaN	4450	2749	7195
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7202	21.63	NaN	5498.9	30	0	821.89	0.139	+			18579	ISPLPRPAQ	9	65	489.78988730549986	NaN	0	489.7900085449219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ISPLPRPAQ_	ENST00000355472.9_1_5:176869404-176869623:+|nuORF	40.05817265558897	0.275207446262312	4				NaN	NaN	0	NaN	4451	2749	7195
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7220	21.668	NaN	37541	30	0	3774.2	0.214	+			971	AEKAVTKEEF	10	86	576.3012072184378	1150.5878615036754	2	576.301025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEKAVTKEEF_	ENSG00000168028|ENST00000301821|RPSA;ENST00000478027.2_1_3:39450050-39453856:+|nuORF;nc|ENSG00000288920|A0A8I5KQE6|RPSA2	171.33049012695201	0.003262457723401657	4				NaN	NaN	0	NaN	4466	2752	7219
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7221	21.672	NaN	15850	30	0	2948.5	0.106	+			21355	KMAKELQR	8	81	502.28930921394056	NaN	0	502.2894287109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KMAKELQR_	ENSG00000147316|ENST00000344683|MCPH1;MCPH1|p.P771Qfs*8|1|0.21|ENSG00000147316|chr8:6621546-6621546|C/-|frameshift_variant;MCPH1|p.T468Pfs*32|2|0.36|ENSG00000147316|chr8:6445118-6445118|A/-|frameshift_variant;nc|ENSG00000147316|Q8NEM0-2|MCPH1;nc|ENSG00000147316|Q8NEM0-3|MCPH1	66.42927471994793	1.7418937515398478	4				NaN	NaN	0	NaN	4467	2752	7219
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7222	21.674	NaN	15645	30	0	2125	0.106	+			6280	AVSSLIRNK	9	87	494.3012444015314	986.5879358698628	2	494.3006591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVSSLIRNK_	ENSG00000181929|ENST00000548065|PRKAG1;ENST00000546531.5_1_12:49396684-49399341:-|nuORF;ENST00000550448.5_1_12:49398244-49398481:-|nuORF;nc|ENSG00000181929|P54619-2|PRKAG1;nc|ENSG00000181929|P54619-3|PRKAG1	145.15565482312357	0.00806134135205793	4				NaN	NaN	0	NaN	4468	2752	7219
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7223	21.675	NaN	3969.6	30	0	371.81	0.106	+			23617	LAPPGAGVAVH	11	78	330.19036323495084	987.5492603050525	3	330.19073486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LAPPGAGVAVH_	ENSG00000125813|ENST00000613128|PAX1;nc|ENSG00000125813|P15863-2|PAX1;nc|ENSG00000125813|P15863-3|PAX1;nc|ENSG00000125813|P15863|PAX1	27.047317107675042	0.7060868989289394	4				NaN	NaN	0	NaN	4469	2752	7219
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7224	21.677	NaN	2723.6	30	0	1296.9	0.106	+			31816	QPPVGASR	8	45	406.22452479119426	810.4344966491885	2	406.2246398925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QPPVGASR_	ENSG00000167992|ENST00000335613|VWCE	42.396135135203025	0.6414440140393314	4				NaN	NaN	0	NaN	4470	2752	7219
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7225	21.679	NaN	7388.4	30	0	1390.8	0.037				-1	GILSARECKT	10	64	567.80126953125	NaN	0	567.80126953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_GILSAREC(Carbamidomethyl (C))KT_	ENST00000370418.7_1_10:101816855-101825078:-|nuORF	24.519189625965996	0.41966695327750003	4				NaN	NaN	0	NaN	4471	2752	7219
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7226	21.68	NaN	14497	30	0	1765.3	0.141	+			2582	AQFGGKILRK	10	72	559.346034547132	1116.677516161064	2	559.3466186523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AQFGGKILRK_	ENSG00000070047|ENST00000264555|PHRF1;nc|ENSG00000070047|Q9P1Y6-2|PHRF1;nc|ENSG00000070047|Q9P1Y6-3|PHRF1;PHRF1|p.E1225Kfs*62|1|0.36|ENSG00000070047|chr11:609125-609125|G/-|frameshift_variant;PHRF1|p.L1393Cfs*8|1|0.38|ENSG00000070047|chr11:609628-609628|C/-|frameshift_variant;PHRF1|p.P938Qfs*23|2|0.45|ENSG00000070047|chr11:608263-608263|C/-|frameshift_variant;PHRF1|p.T1126Pfs*73|1|0.36|ENSG00000070047|chr11:608827-608827|C/-|frameshift_variant	90.36981228632155	0.12895663264417576	4				NaN	NaN	0	NaN	4472	2752	7219
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7244	21.719	NaN	7056.7	30	0	1981.2	0.214	+			41446	SVNLKVSPK	9	89	324.53400532124965	970.5801865639489	3	324.5342712402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVNLKVSPK_	ENSG00000164985|ENST00000380733|PSIP1;nc|ENSG00000164985|O75475-2|PSIP1;nc|ENSG00000164985|O75475-3|PSIP1;PSIP1|p.K229Sfs*36|1|0.45|ENSG00000164985|chr9:15474181-15474181|T/-|frameshift_variant	35.15202426646627	0.4747332964206883	4				NaN	NaN	0	NaN	4487	2755	7243
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7245	21.722	NaN	22675	30	0	3347.6	0.106			+	48637	VTSLSALRK	9	78	487.8034476592892	973.5923423853784	2	487.80322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTSLSALRK_	REV__DNAH10|p.D3416Mfs*54|1|0.28|ENSG00000197653|chr12:123914871-123914871|C/-|frameshift_variant;REV__DNAH10|p.N2655Kfs*10|1|0.19|ENSG00000197653|chr12:123877852-123877853|-/A|frameshift_variant;REV__DNAH10|p.N3499Ifs*2|1|0.14|ENSG00000197653|chr12:123916578-123916578|A/-|frameshift_variant;REV__DNAH10|p.Q2965Kfs*11|1|0.57|ENSG00000197653|chr12:123894687-123894687|C/-|frameshift_variant;REV__ENSG00000197653|ENST00000673944|DNAH10;REV__nc|ENSG00000197653|Q8IVF4|DNAH10	93.5975768576971	0.05472259948179787	4				NaN	NaN	0	NaN	4488	2755	7243
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7246	21.724	NaN	11844	30	0	865.79	0.106	+			40051	STNLIIHQK	9	79	527.3063026480021	1052.598052362804	2	527.3064575195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STNLIIHQK_	ENSG00000196152|ENST00000342483|ZNF79	153.03582135801034	0.006161527642367307	4				NaN	NaN	0	NaN	4489	2755	7243
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7247	21.726	NaN	4847.7	30	0	606.16	0.106	+			12847	GEPDHNEAL	9	59	491.2174231341635	980.420293335127	2	491.2171936035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEPDHNEAL_	ENSG00000100038|ENST00000357179|TOP3B;ENST00000444502.5_1_22:22313806-22324763:-|nuORF;ENST00000457179.5_1_22:22317029-22324763:-|nuORF;nc|ENSG00000100038|O95985-2|TOP3B;nc|ENSG00000100038|O95985-3|TOP3B	45.97224482568171	0.3502073465782774	4				NaN	NaN	0	NaN	4490	2755	7243
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7248	21.728	NaN	6243.8	30	0	924.93	0.106			+	3709	ATAAPPRPSL	10	84	327.5220954929886	979.5444570791659	3	327.5222473144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATAAPPRPSL_	REV__CNNM1|p.A39T|1|0.56|ENSG00000119946|chr10:99329502-99329502|G/A|missense_variant	19.1035232394073	0.7193765342308498	4				NaN	NaN	0	NaN	4491	2755	7243
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7249	21.73	NaN	3342.9	30	0	226.05	0.033	+			2440	APGSPVSLR	9	64	442.25316838286625	882.4917838325325	2	442.253173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_APGSPVSLR_	ENST00000525448.5_1_11:124747079-124747902:+|nuORF;ENST00000529658.5_1_11:124746814-124747712:+|nuORF	55.50420428727701	0.2510918378945873	4				NaN	NaN	0	NaN	4492	2755	7243
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7250	21.73	NaN	14005	30	0	1678	0.145				-1	SYNICFELEDS	11	74	688.7892198701846	1375.5638868071692	2	688.7876586914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_SYNIC(Carbamidomethyl (C))FELEDS_	ENSG00000083642|ENST00000315596|PDS5B;ENST00000498550.5_1_13:33222909-33262824:+|nuORF;nc|ENSG00000083642|Q9NTI5-2|PDS5B;nc|ENSG00000083642|Q9NTI5-3|PDS5B;PDS5B|p.G721Dfs*35|1|0.13|ENSG00000083642|chr13:32732132-32732132|A/-|frameshift_variant;PDS5B|p.K1268Rfs*8|1|0.07|ENSG00000083642|chr13:32770296-32770296|A/-|frameshift_variant;PDS5B|p.K1287Rfs*22|1|0.26|ENSG00000083642|chr13:32770351-32770351|A/-|frameshift_variant;PDS5B|p.K693Qfs*8|1|0.11|ENSG00000083642|chr13:32710054-32710055|-/T|frameshift_variant;PDS5B|p.N1390Cfs*12|1|0.44|ENSG00000083642|chr13:32770750-32770751|AA/-|frameshift_variant;PDS5B|p.S1198Vfs*10|1|0.28|ENSG00000083642|chr13:32764556-32764556|A/-|frameshift_variant	29.170058357718403	0.683821074385409	4				NaN	NaN	0	NaN	4493	2755	7243
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7268	21.769	NaN	15970	30	0	1708	0.213	+			38198	SQFLAPKAMKK	11	80	624.8601041294103	1247.7056553256205	2	624.8603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SQFLAPKAMKK_	ENSG00000214530|ENST00000334805|STARD10;ENST00000535075.1_1_11:72465944-72466832:-|nuORF;ENST00000543089.1_1_11:72465944-72468974:-|nuORF	139.3066351666995	0.000563693985352425	4				NaN	NaN	0	NaN	4508	2758	7267
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7269	21.773	NaN	54189	30	0	13065	0.106				-1	 	0	96	345.1937447341585	1032.5594048026755	3	345.1938781738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4509	2758	7267
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7270	21.775	NaN	3216.9	30	0	792.96	0.106			+	24059	LEIKEKQK	8	61	508.3110046386719	NaN	0	508.3110046386719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LEIKEKQK_	REV__ENSG00000152359|ENST00000428202|POC5;REV__nc|ENSG00000152359|Q8NA72-2|POC5;REV__nc|ENSG00000152359|Q8NA72-3|POC5;REV__POC5|p.E345Sfs*7|1|0.07|ENSG00000152359|chr5:75689109-75689109|T/-|frameshift_variant	68.78682469695295	1.7418937515398478	4				NaN	NaN	0	NaN	4510	2758	7267
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7271	21.776	NaN	1728	30	0	165.83	0.106	+			1834	AIILHQFA	8	46	456.7686475624457	911.5227421916915	2	456.7682800292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AIILHQFA_	ENSG00000146267|ENST00000389677|FAXC	21.70233525837049	0.7917639344264583	4				NaN	NaN	0	NaN	4511	2758	7267
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7272	21.778	NaN	1799	30	0	281.03	0.106				-1	MAPPTELL	8	55	465.2354469580323	928.4563409828646	2	465.2107849121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))M(Oxidation (M))APPTELL_	ENST00000469716.1_1_7:95053779-95064326:-|nuORF;ENST00000471883.1_1_7:95047556-95064326:-|nuORF	46.76643321282427	0.6143254112625767	4				NaN	NaN	0	NaN	4512	2758	7267
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7273	21.78	NaN	9054	30	0	2678.8	0.034	+			45975	VATEGSREL	9	62	481.251096751561	960.4876405699221	2	481.2511901855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VATEGSREL_	ENSG00000108771|ENST00000251642|DHX58;ENST00000586522.5_1_17:40255624-40263910:-|nuORF	66.96192283764107	0.15557981141143568	4				NaN	NaN	0	NaN	4513	2758	7267
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7274	21.781	NaN	5498.4	30	0	524.53	0.14	+			26744	LVMESALGKV	10	70	523.7997375358166	1045.584922138433	2	523.8045043945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LVMESALGKV_	tr|U7SKM3|U7SKM3_FUSNU3-hydroxyacyl-[acyl-carrier-protein]dehydrataseFabZOS=FusobacteriumnucleatumCTI-5OX=1316586GN=fabZPE=3SV=1	71.87747018426188	0.26198133118427214	4				NaN	NaN	0	NaN	4514	2758	7267
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7292	21.819	NaN	27997	30	0	3865	0.214			+	-1	VSCKKDSMLK	10	84	598.3117278354124	1194.6089027376247	2	598.3118286132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_VSC(Carbamidomethyl (C))KKDSMLK_	REV__ENSG00000106105|ENST00000389266|GARS1;REV__ENST00000478124.5_1_7:30634537-30662079:+|nuORF;REV__nc|ENSG00000106105|P41250-2|GARS1	82.7504851949679	0.1731497355276012	4				NaN	NaN	0	NaN	4529	2761	7291
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7293	21.822	NaN	13920	30	0	7891.7	0.106	+			29910	PLPYGVSAPGP	11	71	352.1900315393366	1053.5482652182097	3	352.190185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PLPYGVSAPGP_	ENSG00000068137|ENST00000591022|PLEKHH3;ENST00000456950.6_1_17:40821512-40828020:-|nuORF;ENST00000591490.5_1_17:40821740-40828722:-|nuORF;nc|ENSG00000068137|Q7Z736-2|PLEKHH3;nc|ENSG00000068137|Q7Z736-3|PLEKHH3;nc|ENSG00000068137|Q7Z736-4|PLEKHH3;PLEKHH3|p.A280Rfs*7|1|0.2|ENSG00000068137|chr17:42672324-42672324|C/-|frameshift_variant	23.04248740728303	0.7480942964079428	4				NaN	NaN	0	NaN	4530	2761	7291
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7294	21.824	NaN	5029.9	30	0	2005.1	0.106	+			15647	GVLHKLDSF	9	61	339.19027301650016	1014.5489896497005	3	339.1904602050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GVLHKLDSF_	ENSG00000124496|ENST00000695948|TRERF1;nc|ENSG00000124496|Q96PN7-4|TRERF1;nc|ENSG00000124496|Q96PN7-5|TRERF1;nc|ENSG00000124496|Q96PN7|TRERF1;TRERF1|p.F853Rfs*6|2|0.34|ENSG00000124496|chr6:42256748-42256751|CAAA/-|frameshift_variant	14.664097394203935	0.6112419832031292	4				NaN	NaN	0	NaN	4531	2761	7291
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7295	21.826	NaN	42607	30	0	30424	0.106				-1	 	0	63	541.3011036222008	1080.5876543112015	2	541.3011474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4532	2761	7291
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7296	21.828	NaN	32635	30	0	5971.8	0.106			+	31998	QRHLECLEQ	9	76	578.2825623995512	1154.5505718659024	2	578.2823486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QRHLECLEQ_	REV__ENST00000448120.6_1_12:3049550-3049889:+|nuORF;REV__nc|ENSG00000078246|O75386-2|TULP3	49.536043120802724	0.308405419312776	4				NaN	NaN	0	NaN	4533	2761	7291
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7297	21.83	NaN	9596.7	30	0	954.25	0.035	+			40982	SVGLFLVRP	9	79	494.3012444015314	986.5879358698628	2	494.8049011230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVGLFLVRP_	ENST00000376494.1_1_13:99373362-99378793:-|nuORF	60.97194046774394	0.20551255781574032	4				NaN	NaN	0	NaN	4534	2761	7291
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7298	21.83	NaN	18983	30	0	3739.3	0.143	+			31615	QLYWSHPRK	9	70	607.8248185178866	1213.635084102573	2	607.824951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QLYWSHPRK_	ENSG00000213741|ENST00000245458|RPS29;ENST00000554075.1_1_14:50052568-50053064:-|nuORF;ENST00000557367.2_1_14:50053001-50053064:-|nuORF;nc|ENSG00000213741|P62273-2|RPS29	69.6276240434122	0.14239879520340665	4				NaN	NaN	0	NaN	4535	2761	7291
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7317	21.867	NaN	17942	30	0	8071.4	0.214				-1	IMEPDVPL	8	66	465.2354469580323	928.4563409828646	2	465.23486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_IM(Oxidation (M))EPDVPL_	ENSG00000129925|ENST00000431232|PGAP6	28.2542754592877	0.7411748056684583	4				NaN	NaN	0	NaN	4551	2764	7316
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7318	21.871	NaN	20575	30	0	2893.8	0.106			+	-1	HHHCLPCLF	9	63	582.2645742004848	1162.5145954677696	2	582.26416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_HHHC(Carbamidomethyl (C))LPCLF_	REV__ENSG00000176029|ENST00000326053|C11orf16;REV__nc|nan|Q9NQ32-2|C11orf16	29.841539824830324	0.5243625958137083	4				NaN	NaN	0	NaN	4552	2764	7316
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7319	21.873	NaN	16309	30	0	4696	0.106			+	1704	AGVGADVV	8	78	344.1888905679159	NaN	0	344.1889953613281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AGVGADVV_	REV__ENSG00000167741|ENST00000381550|GGT6;REV__nc|ENSG00000167741|Q6P531|GGT6	26.79610172149135	1.7418937515398478	4				NaN	NaN	0	NaN	4553	2764	7316
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7320	21.875	NaN	13837	30	0	1866.2	0.106	+			3323	ASLVGQTSPK	10	78	494.27733178993213	986.5401106466643	2	494.27679443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASLVGQTSPK_	ENSG00000055044|ENST00000264279|NOP58	159.33581866081465	0.006837894036646432	4				NaN	NaN	0	NaN	4554	2764	7316
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7321	21.877	NaN	6867.7	30	0	1989.2	0.106				-1	IKMKQDLFG	9	57	548.2957750442346	1094.576997155269	2	548.2958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_IKM(Oxidation (M))KQDLFG_	GCC2|p.E105Dfs*5|1|0.08|ENSG00000135968|chr2:108469077-108469078|-/TTTATTT|frameshift_variant	31.529811441608018	0.5085848003137583	4				NaN	NaN	0	NaN	4555	2764	7316
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7322	21.878	NaN	8467.4	30	0	2037.6	0.106			+	-1	LPHGELSCPI	10	56	561.7839391725561	1121.553325411912	2	561.7833862304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_LPHGELSC(Carbamidomethyl (C))PI_	REV__ENSG00000151835|ENST00000382292|SACS;REV__nc|ENSG00000151835|Q9NZJ4-2|SACS;REV__SACS|p.I3485Lfs*10|1|0.24|ENSG00000151835|chr13:23333423-23333423|T/-|frameshift_variant;REV__SACS|p.K2931Nfs*22|1|0.23|ENSG00000151835|chr13:23335083-23335083|T/-|frameshift_variant;REV__SACS|p.L2871Ffs*29|1|0.26|ENSG00000151835|chr13:23335263-23335264|-/A|frameshift_variant;REV__SACS|p.L3102*|1|0.33|ENSG00000151835|chr13:23334571-23334571|A/-|frameshift_variant;REV__SACS|p.S4423Ffs*42|1|0.18|ENSG00000151835|chr13:23330610-23330611|-/G|frameshift_variant	37.15910966729921	0.575322462179216	4				NaN	NaN	0	NaN	4556	2764	7316
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7323	21.88	NaN	6483.6	30	0	1822.3	0.034				-1	MSLIVSCC	8	49	485.21445055697905	968.4143481807581	2	485.2137145996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C)	_MSLIVSC(Carbamidomethyl (C))C(Carbamidomethyl (C))_	ENSG00000204624|ENST00000294484|DISP3;nc|ENSG00000204624|Q9P2K9-2|DISP3	26.79610172149135	0.7524337208463756	4				NaN	NaN	0	NaN	4557	2764	7316
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7341	21.918	NaN	238210	30	0	29648	0.167	+			32073	QSASPLLHGEK	11	125	583.8119335016593	1165.6093140701184	2	583.8119506835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QSASPLLHGEK_	ENST00000550178.1_1_12:120933958-120934105:+|nuORF	100.81924332030881	0.058993442163212936	4				NaN	NaN	0	NaN	4572	2767	7340
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7342	21.92	NaN	19197	30	0	11252	0.106			+	30135	PRSVGRRTG	9	73	329.193864639603	984.5597645190091	3	329.1940002441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PRSVGRRTG_	REV__ENST00000531840.1_1_11:2416360-2416819:+|nuORF	29.14955571784316	0.5308295550522326	4				NaN	NaN	0	NaN	4573	2767	7340
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7343	21.922	NaN	15584	30	0	9108.9	0.106	+			41487	SVPADLSRPK	10	68	535.3038111844692	1068.5930694357382	2	535.3040161132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVPADLSRPK_	ENSG00000047849|ENST00000683076|MAP4;MAP4|p.R919Gfs*14|1|0.44|ENSG00000047849|chr3:47870917-47870917|G/-|frameshift_variant;MAP4|p.T960Qfs*35|1|0.3|ENSG00000047849|chr3:47869309-47869309|T/-|frameshift_variant;MAP4|p.V999*|1|0.25|ENSG00000047849|chr3:47867318-47867318|T/-|frameshift_variant;nc|ENSG00000047849|P27816-2|MAP4;nc|ENSG00000047849|P27816-4|MAP4;nc|ENSG00000047849|P27816-5|MAP4;nc|ENSG00000047849|P27816-6|MAP4;nc|ENSG00000047849|P27816|MAP4	96.0336014099291	0.09653029772959643	4				NaN	NaN	0	NaN	4574	2767	7340
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7344	21.924	NaN	7447.8	30	0	782	0.106			+	28657	NLLMACAKAVA	11	75	552.7981188003365	1103.581684667473	2	552.7986450195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NLLMACAKAVA_	REV__ENO4|p.G341Rfs*25|1|0.26|ENSG00000188316|chr10:116868672-116868673|-/A|frameshift_variant;REV__ENO4|p.Y584Tfs*31|2|0.33|ENSG00000188316|chr10:116881534-116881534|T/-|frameshift_variant;REV__ENSG00000188316|ENST00000341276|ENO4;REV__nc|ENSG00000188316|A6NNW6-4|ENO4	64.20726635412375	0.28589947959657164	4				NaN	NaN	0	NaN	4575	2767	7340
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7345	21.926	NaN	5586.1	30	0	937.72	0.106			+	-1	RAAMMNPSL	9	78	503.74394747948804	1005.4733420257761	2	503.74359130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_RAAM(Oxidation (M))MNPSL_	REV__KCNK17|p.T126M|1|0.21|ENSG00000124780|chr6:39304631-39304631|G/A|missense_variant	40.77816245573522	0.41113185337114944	4				NaN	NaN	0	NaN	4576	2767	7340
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7346	21.928	NaN	3206	30	0	471.83	0.106			+	44164	TQPSGGAVL	9	69	415.22416117463916	828.4337694160783	2	415.2242431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TQPSGGAVL_	REV__ENSG00000198894|ENST00000361786|CIPC	66.42927471994793	0.16001998865088202	4				NaN	NaN	0	NaN	4577	2767	7340
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7347	21.93	NaN	13947	30	0	1783.4	0.035	+			40893	SVFLGTHSK	9	70	488.2665559044821	974.5185588757643	2	488.2663879394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVFLGTHSK_	ENSG00000119685|ENST00000298832|TTLL5;nc|ENSG00000119685|Q6EMB2-2|TTLL5	96.0336014099291	0.047854655524928534	4				NaN	NaN	0	NaN	4578	2767	7340
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7365	21.966	NaN	8710.4	30	0	1050.4	0.214	+			15374	GTVYFKEGK	9	73	514.7745971869933	1027.5346414407866	2	514.774169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTVYFKEGK_	ENSG00000004478|ENST00000001008|FKBP4	101.45984612302182	0.0377122763612125	4				NaN	NaN	0	NaN	4593	2770	7364
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7366	21.969	NaN	6090.7	30	0	900.44	0.106	+			18913	IVMPTTKEK	9	65	523.7997375358166	1045.584922138433	2	523.7992553710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IVMPTTKEK_	ENSG00000067704|ENST00000366922|IARS2	49.536043120802724	0.308405419312776	4				NaN	NaN	0	NaN	4594	2770	7364
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7367	21.971	NaN	6963.5	30	0	1967.9	0.106			+	36244	SEMLLEMLPQ	10	58	595.791024069841	1189.567495206482	2	595.7913208007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEMLLEMLPQ_	REV__ENSG00000111344|ENST00000548055|RASAL1;REV__ENST00000418411.6_1_12:113540888-113573291:-|nuORF;REV__ENST00000546727.5_1_12:113545343-113557136:-|nuORF;REV__ENST00000548972.5_1_12:113545343-113573291:-|nuORF;REV__ENST00000551051.5_1_12:113546023-113565713:-|nuORF;REV__nc|ENSG00000111344|O95294-2|RASAL1;REV__nc|ENSG00000111344|O95294-3|RASAL1;REV__nc|ENSG00000111344|O95294|RASAL1	20.94693142431847	0.7087701759873708	4				NaN	NaN	0	NaN	4595	2770	7364
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7368	21.973	NaN	8053.2	30	0	1563.4	0.106	+			31530	QLKMDILIKK	10	69	623.3837807863704	1244.7530086395407	2	623.3837280273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_QLKM(Oxidation (M))DILIKK_	ENST00000442354.1_1_9:44052481-44067763:-|nuORF	43.650786325866115	0.5155049133366767	4				NaN	NaN	0	NaN	4596	2770	7364
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7369	21.975	NaN	3628.3	30	0	956.98	0.106				-1	 	0	57	485.358328900459	NaN	0	485.7579040527344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4597	2770	7364
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7370	21.977	NaN	11126	30	0	989.27	0.041	+			20085	KEKGWHFLLRR	11	77	735.4269944018266	1468.8394358704531	2	735.9270629882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KEKGWHFLLRR_	HHLA1|p.V60Wfs*21|1|0.14|ENSG00000132297|chr8:132100096-132100096|C/-|frameshift_variant	17.468008924990375	0.788697330333842	4				NaN	NaN	0	NaN	4598	2770	7364
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7371	21.978	NaN	4089	30	0	1090.1	0.144			+	-1	IVQKEGMLI	9	78	349.5351862434139	1045.5837293304417	3	349.5350341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_IVQKEGM(Oxidation (M))LI_	REV__CATSPER3|p.M289I|1|0.36|ENSG00000152705|chr5:135009421-135009421|G/A|missense_variant	32.81241826257853	0.4965981579233955	4				NaN	NaN	0	NaN	4599	2770	7364
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7389	22.016	NaN	255250	30	0	81616	0.158				-1	 	0	77	384.77194138195927	767.5293298307186	2	384.7720031738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4614	2773	7388
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7390	22.018	NaN	126620	30	0	67146	0.106	+			23334	KYSLVKNKI	9	116	364.89720722619836	1091.669792278795	3	364.8973693847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KYSLVKNKI_	ENSG00000188643|ENST00000368706|S100A16;ENST00000474991.1_1_1:153580188-153585458:-|nuORF	79.71258880314673	0.09879134589249085	4				NaN	NaN	0	NaN	4615	2773	7388
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7391	22.02	NaN	40463	30	0	4267.5	0.106	+			5203	ATTSLSLRR	9	113	502.7961074799594	1003.5776620267188	2	502.7959289550781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATTSLSLRR_	ENSG00000204351|ENST00000375394|SKIC2;ENST00000465703.5_1_6:31926942-31928873:+|nuORF;ENST00000488648.5_1_6:31926942-31929152:+|nuORF;SKIV2L|p.E1164Gfs*8|1|0.22|ENSG00000204351|chr6:31969365-31969366|-/G|frameshift_variant;SKIV2L|p.E816Rfs*3|1|0.37|ENSG00000204351|chr6:31967104-31967104|G/-|frameshift_variant	98.58198989935565	0.04066992115528678	4				NaN	NaN	0	NaN	4616	2773	7388
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7392	22.022	NaN	53844	30	0	20069	0.106	+			46906	VISRAISVK	9	118	324.87804377153986	NaN	0	324.8780212402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VISRAISVK_	ENST00000530759.1_1_11:76155338-76155506:-|nuORF	44.377184641726394	0.24544280798894275	4				NaN	NaN	0	NaN	4617	2773	7388
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7393	22.024	NaN	24401	30	0	2937.3	0.106	+			4680	ATLSEARLK	9	92	494.7932587789715	987.571964624743	2	494.79278564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATLSEARLK_	ENSG00000153815|ENST00000537098|CMIP;nc|ENSG00000153815|Q8IY22-2|CMIP;nc|ENSG00000153815|Q8IY22-3|CMIP	164.45504665044191	0.003713414289755139	4				NaN	NaN	0	NaN	4618	2773	7388
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7394	22.026	NaN	13424	30	0	1720.9	0.106	+			4755	ATMQSKLIQK	10	81	574.3291513078163	1146.6437496824326	2	574.3292236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATMQSKLIQK_	ENSG00000179603|ENST00000339582|GRM8;ENST00000341617.7_1_7:126079175-126341814:-|nuORF;nc|ENSG00000179603|O00222-2|GRM8	150.15188659993407	0.008468567113416427	4				NaN	NaN	0	NaN	4619	2773	7388
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7395	22.028	NaN	28715	30	0	3439	0.034	+			38596	SSGFVAIKK	9	88	468.77950987927665	935.5444668253533	2	468.7790222167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSGFVAIKK_	ENSG00000198478|ENST00000369838|SH3BGRL2;SH3BGRL2|p.P55Rfs*41|2|0.28|ENSG00000198478|chr6:79673727-79673727|C/-|frameshift_variant	153.03582135801034	0.006161527642367307	4				NaN	NaN	0	NaN	4620	2773	7388
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7413	22.064	NaN	93310	30	0	9494	0.195	+			14072	GSLASVYHK	9	89	481.25872596506156	960.5028989969231	2	481.258544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSLASVYHK_	AP2B1|p.N760Ifs*17|1|0.37|ENSG00000006125|chr17:35674314-35674314|A/-|frameshift_variant;ENSG00000006125|ENST00000610402|AP2B1;ENST00000588116.1_1_17:33977635-33977996:+|nuORF;nc|ENSG00000006125|P63010-3|AP2B1;nc|ENSG00000006125|P63010|AP2B1	153.03582135801034	0.006161527642367307	4				NaN	NaN	0	NaN	4635	2776	7412
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7414	22.067	NaN	13307	30	0	6326.6	0.106	+			914	AEIEGLKGQRA	11	71	391.21895590161034	1170.635038305031	3	391.2191162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEIEGLKGQRA_	CON__H-INV:HIT000292931;CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;ENST00000547031.5_1_12:53292389-53294972:-|nuORF;ENST00000562317.1_1_16:78082520-78083381:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	23.52269567125451	0.7430573033454468	4				NaN	NaN	0	NaN	4636	2776	7412
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7415	22.07	NaN	35836	30	0	4305.7	0.106	+			1776	AICQWERNK	9	81	602.7977549170058	1203.5809569008115	2	602.7984619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_AIC(Carbamidomethyl (C))QWERNK_	ENSG00000140526|ENST00000352732|ABHD2	158.07458414430337	0.004987072822166904	4				NaN	NaN	0	NaN	4637	2776	7412
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7416	22.071	NaN	11828	30	0	2261.1	0.106	+			15440	GTYSKIMNH	9	77	525.7556242271129	1049.4966955210257	2	525.7557983398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTYSKIMNH_	ENSG00000067900|ENST00000399799|ROCK1;ROCK1|p.I1150Nfs*5|1|0.23|ENSG00000067900|chr18:20959903-20959904|-/T|frameshift_variant;ROCK1|p.K1307Nfs*3|1|0.28|ENSG00000067900|chr18:20953718-20953718|T/-|frameshift_variant;ROCK1|p.K818Efs*6|1|0.51|ENSG00000067900|chr18:20984387-20984388|TT/-|frameshift_variant;ROCK1|p.N871Kfs*14|1|0.07|ENSG00000067900|chr18:20979951-20979952|-/T|frameshift_variant;ROCK1|p.N871Tfs*5|1|0.29|ENSG00000067900|chr18:20979952-20979952|T/-|frameshift_variant;ROCK1|p.P1257Lfs*3|1|0.21|ENSG00000067900|chr18:20954866-20954866|G/-|frameshift_variant	139.97047562133406	0.010493916756945389	4				NaN	NaN	0	NaN	4638	2776	7412
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7417	22.073	NaN	8400.9	30	0	2642.1	0.106			+	-1	MVLTMIILG	9	79	336.1941052816153	1005.5604864450459	3	336.194091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_MVLTM(Oxidation (M))IILG_	REV__ENSG00000182022|ENST00000435907|CHST15;REV__nc|ENSG00000182022|Q7LFX5-2|CHST15	20.94693142431847	0.6074874384046576	4				NaN	NaN	0	NaN	4639	2776	7412
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7418	22.075	NaN	7449.4	30	0	638.27	0.106	+			3633	ASVYQPLKK	9	72	517.3064382704044	1032.5983236076088	2	517.3055419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASVYQPLKK_	ENSG00000204178|ENST00000374343|MACO1;nc|ENSG00000204178|Q8N5G2-2|MACO1;nc|ENSG00000204178|Q8N5G2-3|MACO1	101.45984612302182	0.0377122763612125	4				NaN	NaN	0	NaN	4640	2776	7412
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7419	22.077	NaN	2842.3	30	0	268.2	0.036			+	48084	VSSWILIAK	9	70	339.54156967948745	1015.6028796386624	3	339.5415954589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VSSWILIAK_	REV__ENST00000437325.2_1_1:235901419-235901638:+|nuORF	18.324413293986947	0.6112419832031293	4				NaN	NaN	0	NaN	4641	2776	7412
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7437	22.113	NaN	10811	30	0	2066.6	0.214	+			35400	SAQNTKFFK	9	69	535.7851006513432	1069.5556483694863	2	535.7852783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAQNTKFFK_	ENSG00000140259|ENST00000267812|MFAP1;ENST00000484386.1_1_15:44097294-44102132:-|nuORF	79.48907831485694	0.09975780661107167	4				NaN	NaN	0	NaN	4656	2779	7436
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7438	22.116	NaN	7497.8	30	0	1609	0.106			+	18859	IVFALRAAL	9	88	325.21191524095116	NaN	0	325.19390869140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IVFALRAAL_	REV__ENSG00000131620|ENST00000355303|ANO1;REV__ENST00000525494.1_1_11:70016194-70034107:+|nuORF;REV__nc|ENSG00000131620|Q5XXA6-2|ANO1;REV__nc|ENSG00000131620|Q5XXA6-4|ANO1;REV__nc|ENSG00000131620|Q5XXA6-5|ANO1	35.61828744233558	0.29773779453147337	4				NaN	NaN	0	NaN	4657	2779	7436
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7439	22.118	NaN	7693.4	30	0	752.89	0.106			+	9924	EQTWRLLP	8	76	521.7877810782455	1041.561009223291	2	521.7875366210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EQTWRLLP_	REV__nc|ENSG00000151914|Q03001-3|DST	37.15910966729921	0.6739408393984688	4				NaN	NaN	0	NaN	4658	2779	7436
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7440	22.12	NaN	5840.5	30	0	503.19	0.106	+			259	AAMLMPHQK	9	75	513.7650934522414	1025.5156339712828	2	513.764892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AAMLMPHQK_	ENSG00000138663|ENST00000264389|COPS4;nc|ENSG00000138663|Q9BT78-2|COPS4	79.45101966838831	0.09992237243120712	4				NaN	NaN	0	NaN	4659	2779	7436
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7441	22.122	NaN	3381.9	30	0	543.88	0.106			+	28594	NKLSSNKLL	9	56	508.80857851089746	1015.602604088595	2	508.8082275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NKLSSNKLL_	REV__tr|U7T2Z3|U7T2Z3_FUSNUHTHdeoR-typedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00513PE=4SV=1	37.15910966729921	0.4535818937225704	4				NaN	NaN	0	NaN	4660	2779	7436
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7442	22.124	NaN	5698	30	0	837.05	0.036			+	-1	CNESTGFCT	9	83	340.1247001555514	NaN	0	340.5003356933594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_C(Carbamidomethyl (C))NESTGFCT_	REV__ENST00000593250.5_1_18:12691430-12699161:-|nuORF	31.529811441608018	0.3183796599642538	4				NaN	NaN	0	NaN	4661	2779	7436
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7443	22.124	NaN	3321.6	30	0	535.13	0.14	+			33831	RQVPPGACGI	10	53	499.266357421875	NaN	0	499.266357421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RQVPPGACGI_	ENST00000264657.9_1_17:40467307-40467571:-|nuORF	27.882242232435846	0.4086243523356342	4				NaN	NaN	0	NaN	4662	2779	7436
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7461	22.164	NaN	14285	30	0	1762.7	0.214	+			45101	TVILPIKKK	9	79	520.3659850127685	1038.717417092337	2	520.8452758789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVILPIKKK_	ENSG00000138138|ENST00000680024|ATAD1;nc|ENSG00000138138|Q8NBU5-2|ATAD1	51.52775601994872	0.28504342437107444	4				NaN	NaN	0	NaN	4677	2782	7460
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7462	22.167	NaN	5571.2	30	0	575.97	0.106	+			18576	ISPHGNAL	8	68	404.71905417313036	807.4235554130607	2	404.71923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ISPHGNAL_	ENSG00000166855|ENST00000300107|CLPX;ENST00000558103.1_1_15:65450907-65451087:-|nuORF;ENST00000558958.1_1_15:65449172-65477491:-|nuORF	99.37495909608758	0.2510236104623939	4				NaN	NaN	0	NaN	4678	2782	7460
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7463	22.169	NaN	3756	30	0	415.17	0.106	+			35867	SEDPNQAKL	9	64	501.2486986307126	1000.4828443282253	2	501.2485046386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEDPNQAKL_	ENSG00000141279|ENST00000322157|NPEPPS;ENST00000530514.5_1_17:45668242-45699283:+|nuORF;ENST00000534807.1_1_17:45673771-45679230:+|nuORF;nc|ENSG00000141279|P55786-2|NPEPPS	67.49366992349736	0.1516260258713357	4				NaN	NaN	0	NaN	4679	2782	7460
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7464	22.171	NaN	8871.4	30	0	1005.1	0.106	+			45088	TVIDSQTHYR	10	71	610.3071478997703	1218.5997428663404	2	610.3075561523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TVIDSQTHYR_	ENSG00000166557|ENST00000299705|TMED3	104.42354056486148	0.06456012287859861	4				NaN	NaN	0	NaN	4680	2782	7460
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7465	22.173	NaN	2050.3	30	0	529.53	0.106				-1	MKGTKDLT	8	33	455.2406710753932	NaN	0	455.24041748046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_M(Oxidation (M))KGTKDLT_	nc|ENSG00000138185|P49961-2|ENTPD1;nc|ENSG00000138185|P49961-3|ENTPD1	18.324413293986947	1.7418937515398478	4				NaN	NaN	0	NaN	4681	2782	7460
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7466	22.175	NaN	2019.3	30	0	165.66	0.033	+			43	AAALVLKAK	9	50	442.79986572265625	NaN	0	442.79986572265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AAALVLKAK_	ENSG00000137076|ENST00000314888|TLN1;nc|ENSG00000137076|Q9Y490-2|TLN1;TLN1|p.P1628Rfs*20|1|0.44|ENSG00000137076|chr9:35707144-35707144|G/-|frameshift_variant;TLN1|p.S677R|1|0.07|ENSG00000137076|chr9:35717753-35717753|T/G|missense_variant	37.15910966729921	0.2899585034171616	4				NaN	NaN	0	NaN	4682	2782	7460
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7467	22.175	NaN	6424.6	30	0	1540.5	0.139	+			41784	SVSPVVHVR	9	59	490.28797860962993	978.5614042860599	2	490.2879943847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVSPVVHVR_	ENSG00000143889|ENST00000449105|HNRNPLL;nc|ENSG00000143889|Q8WVV9-2|HNRNPLL;nc|ENSG00000143889|Q8WVV9-3|HNRNPLL;nc|ENSG00000143889|Q8WVV9-4|HNRNPLL;nc|ENSG00000143889|Q8WVV9-5|HNRNPLL	69.6276240434122	0.14239879520340665	4				NaN	NaN	0	NaN	4683	2782	7460
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7485	22.214	NaN	146220	30	0	53188	0.183	+			45103	TVILPIKKK	9	93	347.2459544408535	1038.7160339227605	3	347.2462463378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVILPIKKK_	ENSG00000138138|ENST00000680024|ATAD1;nc|ENSG00000138138|Q8NBU5-2|ATAD1	56.43379154798735	0.2433427591689151	4				NaN	NaN	0	NaN	4698	2785	7484
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7486	22.217	NaN	61421	30	0	10827	0.106	+			45102	TVILPIKKK	9	85	520.3659850127685	1038.717417092337	2	520.3660888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVILPIKKK_	ENSG00000138138|ENST00000680024|ATAD1;nc|ENSG00000138138|Q8NBU5-2|ATAD1	104.01359247289065	0.03510646158778409	4				NaN	NaN	0	NaN	4699	2785	7484
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7487	22.219	NaN	77242	30	0	23114	0.106	+			31099	QFQHLVAFK	9	86	559.311609472099	1116.608666010998	2	559.3121337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QFQHLVAFK_	ENST00000352732.9_1_15:89738886-89738976:+|nuORF	87.75429964447693	0.0711966946989736	4				NaN	NaN	0	NaN	4700	2785	7484
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7488	22.221	NaN	9434.3	30	0	1900.8	0.106				-1	 	0	69	420.3072458853324	838.5999388374648	2	420.30743408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4701	2785	7484
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7489	22.223	NaN	8005.1	30	0	1149.6	0.106	+			17823	IEYEKKQTL	9	79	576.3194818817047	1150.6244108302094	2	576.3197021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IEYEKKQTL_	ENSG00000064726|ENST00000261721|BTBD1	112.10723106719422	0.02684780151337622	4				NaN	NaN	0	NaN	4702	2785	7484
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7490	22.225	NaN	5675.9	30	0	733.07	0.106			+	37513	SLLINRAAL	9	70	485.8058904791399	NaN	0	485.80596923828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLLINRAAL_	REV__ENSG00000037280|ENST00000261937|FLT4;REV__ENSG00000102755|ENST00000282397|FLT1;REV__ENSG00000128052|ENST00000263923|KDR;REV__ENST00000451650.1_1_3:46184698-46185163:-|nuORF;REV__KDR|p.T1238Hfs*7|1|0.51|ENSG00000128052|chr4:55082586-55082586|T/-|frameshift_variant;REV__nc|ENSG00000037280|P35916-1|FLT4;REV__nc|ENSG00000102755|P17948-5|FLT1;REV__nc|ENSG00000102755|P17948-6|FLT1;REV__nc|ENSG00000102755|P17948-7|FLT1;REV__nc|ENSG00000102755|P17948-8|FLT1	49.44154591367651	0.21054156626303966	4				NaN	NaN	0	NaN	4703	2785	7484
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7491	22.226	NaN	9047.9	30	0	1802.3	0.035	+			12943	GESSGKNVTL	10	71	496.2569531086337	990.4993532840674	2	496.2567138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GESSGKNVTL_	ENSG00000174444|ENST00000307961|RPL4;ENST00000561554.5_1_15:66795666-66797161:-|nuORF;ENST00000561775.5_1_15:66795189-66797161:-|nuORF;ENST00000564439.5_1_15:66793756-66797161:-|nuORF;ENST00000566039.5_1_15:66793707-66797161:-|nuORF;ENST00000566622.5_1_15:66794044-66797161:-|nuORF;ENST00000566624.5_1_15:66794944-66797161:-|nuORF;ENST00000567229.5_1_15:66795359-66797161:-|nuORF	131.08727773389177	0.013130408032639512	4				NaN	NaN	0	NaN	4704	2785	7484
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7510	22.262	NaN	11913	30	0	1922.5	0.214	+			15467	GVADKILKK	9	77	486.3160690164074	970.6175850996149	2	486.3157958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVADKILKK_	ENSG00000123609|ENST00000243346|NMI	114.85826248499774	0.024312442104607014	4				NaN	NaN	0	NaN	4720	2788	7509
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7511	22.266	NaN	15482	30	0	2449.4	0.106	+			35231	SALEEYTKK	9	72	534.7822035472568	1067.5498541613135	2	534.7825927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SALEEYTKK_	ENSG00000118137|ENST00000236850|APOA1	126.24258497203832	0.01742065577488747	4				NaN	NaN	0	NaN	4721	2788	7509
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7512	22.268	NaN	6162.1	30	0	2325	0.106	+			49642	VYIIQAREP	9	60	544.8088320375311	1087.6031111418622	2	544.8087158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYIIQAREP_	BRD2|p.H667Y|1|0.4|ENSG00000204256|chr6:32979985-32979985|C/T|missense_variant	42.86426827375447	0.38666266728046506	4				NaN	NaN	0	NaN	4722	2788	7509
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7513	22.27	NaN	10761	30	0	1057.5	0.106			+	10334	ETSVRDITL	9	78	517.2799450749131	NaN	0	517.2798461914062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ETSVRDITL_	REV__ENSG00000211456|ENST00000389061|SACM1L;REV__ENST00000438671.3_1_3:45731844-45750997:+|nuORF;REV__ENST00000445499.2_1_3:45730957-45754662:+|nuORF;REV__ENST00000463237.5_1_3:45730948-45754703:+|nuORF;REV__ENST00000463347.5_1_3:45730948-45748420:+|nuORF;REV__SACM1L|p.N346Ifs*2|1|0.35|ENSG00000211456|chr3:45732084-45732084|A/-|frameshift_variant	54.776311868738084	0.17377682019723872	4				NaN	NaN	0	NaN	4723	2788	7509
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7514	22.271	NaN	5248.1	30	0	1402.3	0.106			+	21768	KQRERASE	8	58	502.26726900142893	1002.5199850696579	2	502.2669982910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KQRERASE_	REV__ENSG00000171100|ENST00000370396|MTM1;REV__nc|ENSG00000171100|Q13496-2|MTM1	30.503639358989545	0.7238069182250283	4				NaN	NaN	0	NaN	4724	2788	7509
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7515	22.273	NaN	2590.5	30	0	1032.7	0.106	+			36634	SGGRIHNLKTQ	11	55	404.22787169562145	NaN	0	404.2278137207031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SGGRIHNLKTQ_	ENSG00000177627|ENST00000548364|C12orf54	26.749707702089633	0.4462038980881566	4				NaN	NaN	0	NaN	4725	2788	7509
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7516	22.275	NaN	3909	30	0	393.22	0.035			+	13689	GPKPVTRYA	9	88	330.19036323495084	987.5492603050525	3	330.1903381347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GPKPVTRYA_	REV__ENSG00000022976|ENST00000442396|ZNF839;REV__ENST00000557803.5_1_14:102802004-102808513:+|nuORF;REV__nc|ENSG00000022976|A8K0R7-2|ZNF839;REV__nc|ENSG00000022976|A8K0R7|ZNF839;REV__ZNF839|p.Q768Rfs*33|1|0.25|ENSG00000022976|chr14:102342046-102342047|AG/-|frameshift_variant	23.52269567125451	0.5834155526130771	4				NaN	NaN	0	NaN	4726	2788	7509
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7534	22.312	NaN	71034	30	0	10108	0.179	+			14792	GTLASVYHK	9	83	488.2666738675972	974.5187948019944	2	488.26629638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTLASVYHK_	ENSG00000100280|ENST00000357586|AP1B1;nc|ENSG00000100280|Q10567-2|AP1B1;nc|ENSG00000100280|Q10567-3|AP1B1;nc|ENSG00000100280|Q10567-4|AP1B1	131.03138772384656	0.014687601201650916	4				NaN	NaN	0	NaN	4741	2791	7533
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7535	22.315	NaN	84160	30	0	19184	0.106	+			14366	GTADVHFER	9	102	516.2490881237386	1030.483623314277	2	516.2488403320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTADVHFER_	ENSG00000183684|ENST00000505490|ALYREF;ENST00000512673.1_1_17:79846815-79848630:-|nuORF;nc|ENSG00000183684|Q86V81|ALYREF	154.0112374973812	0.005934173778894772	4				NaN	NaN	0	NaN	4742	2791	7533
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7536	22.317	NaN	20697	30	0	3900.3	0.106	+			3693	ATAAAIGATPR	11	78	500.2826612399387	998.5507695466774	2	500.2825012207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATAAAIGATPR_	ENSG00000137497|ENST00000393695|NUMA1;ENST00000540626.5_1_11:71714575-71718510:-|nuORF;nc|ENSG00000137497|Q14980-2|NUMA1;nc|ENSG00000137497|Q14980-5|NUMA1	122.93914200107957	0.014531093899805671	4				NaN	NaN	0	NaN	4743	2791	7533
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7537	22.319	NaN	16450	30	0	3629.2	0.106	+			14865	GTLMWHQMK	9	73	582.2705803620241	1162.5266077908482	2	582.271240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Oxidation (M)	_GTLM(Oxidation (M))WHQM(Oxidation (M))K_	ENST00000346169.6_1_3:184032401-184033585:+|nuORF;ENST00000352767.7_2_3:184032446-184033585:+|nuORF	125.81401957644128	0.01768009863045738	4				NaN	NaN	0	NaN	4744	2791	7533
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7538	22.321	NaN	15718	30	0	5313.6	0.106	+			43787	TLKQLCAQA	9	98	325.8467900904554	NaN	0	325.84674072265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TLKQLCAQA_	ENSG00000132199|ENST00000647584|ENOSF1;ENST00000578651.5_1_18:683014-712587:-|nuORF;ENST00000585004.5_1_18:688572-706535:-|nuORF;nc|ENSG00000132199|Q7L5Y1-2|ENOSF1;nc|ENSG00000132199|Q7L5Y1-4|ENOSF1;nc|ENSG00000132199|Q7L5Y1-5|ENOSF1;nc|ENSG00000132199|Q7L5Y1-6|ENOSF1	31.529811441608018	0.3183796599642538	4				NaN	NaN	0	NaN	4745	2791	7533
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7539	22.322	NaN	3438.9	30	0	494.88	0.106	+			413	AASTVFIRK	9	72	496.7982204356673	991.5818879381346	2	496.7977600097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AASTVFIRK_	ENST00000306910.8_1_19:58929128-58929233:+|nuORF	42.396135135203025	0.392153681582562	4				NaN	NaN	0	NaN	4746	2791	7533
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7540	22.324	NaN	18574	30	0	2022.9	0.036				-1	IFLGSAVGCM	10	103	338.49790951827976	1012.4718991550393	3	338.4980773925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_IFLGSAVGCM(Oxidation (M))_	tr|U7T5W5|U7T5W5_FUSNUC4-dicarboxylateanaerobiccarrierOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00155PE=4SV=1	23.52269567125451	0.6877354443478558	4				NaN	NaN	0	NaN	4747	2791	7533
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7558	22.36	NaN	26284	30	0	5032.9	0.214	+			1751	AIAEAMKVK	9	86	480.78092352068063	959.5472941081613	2	480.78070068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AIAEAMKVK_	DACH1|p.R518Gfs*25|1|0.29|ENSG00000276644|chr13:71557042-71557042|T/-|frameshift_variant;DACH1|p.T596Nfs*2|1|0.28|ENSG00000276644|chr13:71479252-71479253|-/T|frameshift_variant;ENSG00000276644|ENST00000613252|DACH1;nc|ENSG00000276644|Q9UI36-3|DACH1;nc|ENSG00000276644|Q9UI36|DACH1	158.07458414430337	0.004987072822166904	4				NaN	NaN	0	NaN	4762	2794	7557
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7559	22.364	NaN	15424	30	0	4521.7	0.106				-1	 	0	70	384.77194138195927	767.5293298307186	2	384.7720031738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4763	2794	7557
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7560	22.366	NaN	22144	30	0	5241.6	0.106	+			39717	STIPSTAMHTR	11	76	601.3032272395219	1200.5919015458437	2	601.3034057617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STIPSTAMHTR_	ENSG00000145113|ENST00000463781|MUC4;MUC4|p.N4902Tfs*8|1|0.37|ENSG00000145113|chr3:195761027-195761027|T/-|frameshift_variant;nc|ENSG00000145113|Q99102-10|MUC4;nc|ENSG00000145113|Q99102-11|MUC4;nc|ENSG00000145113|Q99102-13|MUC4;nc|ENSG00000145113|Q99102-15|MUC4;nc|ENSG00000145113|Q99102-16|MUC4;nc|ENSG00000145113|Q99102-17|MUC4;nc|ENSG00000145113|Q99102-2|MUC4;nc|ENSG00000145113|Q99102-3|MUC4;nc|ENSG00000145113|Q99102-5|MUC4;nc|ENSG00000145113|Q99102-7|MUC4;nc|ENSG00000145113|Q99102-8|MUC4;nc|ENSG00000145113|Q99102-9|MUC4	134.38175178908594	0.0009546753189824793	4				NaN	NaN	0	NaN	4764	2794	7557
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7561	22.368	NaN	8244.3	30	0	2726.3	0.106				-1	FVEDTECR	8	61	528.2281218938499	1054.4416908544997	2	528.2279663085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_FVEDTEC(Carbamidomethyl (C))R_	ENSG00000090530|ENST00000319332|P3H2;nc|ENSG00000090530|Q8IVL5-2|P3H2	31.954861631926434	0.7126016770032289	4				NaN	NaN	0	NaN	4765	2794	7557
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7562	22.37	NaN	3176.8	30	0	427.8	0.106	+			22412	KTKKIYNE	8	61	512.2954361402818	1022.5763193473637	2	512.2954711914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KTKKIYNE_	RGS4|p.A111T|1|0.13|ENSG00000117152|chr1:163073575-163073575|G/A|missense_variant	44.377184641726394	0.6291511924298419	4				NaN	NaN	0	NaN	4766	2794	7557
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7563	22.371	NaN	3792.4	30	0	1009.6	0.035	+			18853	IVDDPKALK	9	66	333.53401955875484	997.5802292764645	3	333.53411865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IVDDPKALK_	ENSG00000198648|ENST00000355999|STK39;ENST00000487143.5_1_2:168812008-168969496:-|nuORF;nc|ENSG00000198648|Q9UEW8-2|STK39	31.954861631926434	0.5046124803899898	4				NaN	NaN	0	NaN	4767	2794	7557
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7564	22.372	NaN	5658.8	30	0	821.07	0.14	+			42588	TASTVKAIAI	10	94	325.5338676640391	973.5797735923175	3	325.5340270996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TASTVKAIAI_	ENSG00000156103|ENST00000286614|MMP16	21.9598887501803	0.7004979571547932	4				NaN	NaN	0	NaN	4768	2794	7557
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7582	22.41	NaN	9730.5	30	0	959.76	0.214	+			45443	TVYRGLVQK	9	75	532.3166942070536	1062.6188354809071	2	532.3167724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVYRGLVQK_	ENSG00000148291|ENST00000371964|SURF2	81.52500206392136	0.09095445986635249	4				NaN	NaN	0	NaN	4783	2797	7581
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7583	22.414	NaN	9449.2	30	0	2119	0.106				-1	ATCDHPYIVK	10	77	602.2972041349661	NaN	0	602.2960205078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_ATC(Carbamidomethyl (C))DHPYIVK_	ENSG00000072786|ENST00000176763|STK10;ENST00000519710.1_1_5:171533786-171583726:-|nuORF;STK10|p.T526Pfs*15|3|0.11|ENSG00000072786|chr5:172090341-172090341|T/-|frameshift_variant	54.722347961057174	0.27574710963839943	4				NaN	NaN	0	NaN	4784	2797	7581
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7584	22.416	NaN	8914.4	30	0	3812.9	0.106	+			28604	NKQHLQLKAQ	10	62	403.234761596251	1206.682455388953	3	403.23504638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NKQHLQLKAQ_	ENSG00000272674|ENST00000609684|PCDHB16	61.691277971877994	0.35045824941635534	4				NaN	NaN	0	NaN	4785	2797	7581
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7585	22.418	NaN	4391.9	30	0	501.24	0.106	+			18560	ISNLQKLIA	9	60	500.31375473586525	998.6129565385305	2	500.3132629394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ISNLQKLIA_	LRRC49|p.S138A|1|0.23|ENSG00000137821|chr15:70904667-70904667|T/G|missense_variant	69.6276240434122	0.14239879520340665	4				NaN	NaN	0	NaN	4786	2797	7581
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7586	22.42	NaN	6868.2	30	0	1027.3	0.106	+			8205	EADKRGLTPL	10	72	550.3090156335729	1098.6034783339458	2	550.30908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EADKRGLTPL_	ACAT2|p.I298Nfs*19|1|0.21|ENSG00000120437|chr6:159777434-159777435|-/G|frameshift_variant;ENSG00000120437|ENST00000367048|ACAT2;ENST00000472052.1_1_6:160197162-160199858:+|nuORF;nc|ENSG00000120437|Q9BWD1-2|ACAT2	49.536043120802724	0.461275219792494	4				NaN	NaN	0	NaN	4787	2797	7581
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7587	22.422	NaN	3262.4	30	0	426.93	0.032	+			12606	GEHTPSAL	8	56	406.20072388565706	810.3868948381141	2	406.2007751464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GEHTPSAL_	ENSG00000149925|ENST00000642816|ALDOA;ENST00000398050.3_1_10:127355985-127356390:-|nuORF;ENST00000566146.1_1_16:30080209-30080764:+|nuORF;nc|ENSG00000149925|P04075|ALDOA	57.81127852772723	0.5234495074909924	4				NaN	NaN	0	NaN	4788	2797	7581
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7588	22.422	NaN	5771.2	30	0	945.73	0.142	+			11137	FGDCFPTPPN	10	70	547.7329742974731	1093.4513956617461	2	547.7330322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FGDCFPTPPN_	ENSG00000237136|ENST00000438731|C4orf51	31.529811441608018	0.6223461015008678	4				NaN	NaN	0	NaN	4789	2797	7581
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7606	22.461	NaN	24717	30	0	1225.1	0.214			+	33330	RGTHGRTHL	9	90	517.7835170126873	1033.5524810921745	2	517.7836303710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RGTHGRTHL_	REV__ENST00000441747.6_1_19:1482426-1490130:-|nuORF;REV__ENST00000586616.5_1_19:1482426-1487301:-|nuORF	71.87747018426188	0.13267044672804276	4				NaN	NaN	0	NaN	4804	2800	7605
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7607	22.465	NaN	13802	30	0	1458.5	0.106	+			3396	ASQEIAEKALK	11	79	594.335454573065	1186.65635621293	2	594.3356323242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASQEIAEKALK_	ENSG00000126945|ENST00000316594|HNRNPH2;ENSG00000169045|ENST00000393432|HNRNPH1;ENST00000522958.5_1_5:179046175-179048291:-|nuORF;HNRNPH2|p.L296Yfs*20|1|0.57|ENSG00000126945|chrX:101412869-101412869|G/-|frameshift_variant	160.7221532484678	5.2657678129832264E-05	4				NaN	NaN	0	NaN	4805	2800	7605
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7608	22.467	NaN	6637.6	30	0	573.82	0.106	+			45240	TVQEHLIEK	9	76	548.8034118652278	1095.5922707972554	2	548.8037719726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVQEHLIEK_	ENSG00000082898|ENST00000401558|XPO1;ENST00000428210.5_1_2:61705957-61719950:-|nuORF	133.9934435666947	0.013297982075521412	4				NaN	NaN	0	NaN	4806	2800	7605
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7609	22.469	NaN	11467	30	0	4092.2	0.106			+	-1	GMLMVLLLT	9	81	336.1941052816153	1005.5604864450459	3	336.194091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_GMLM(Oxidation (M))VLLLT_	REV__LRRTM4|p.T28M|1|0.3|ENSG00000176204|chr2:77519786-77519786|G/A|missense_variant	26.69291269510374	0.5537881896960711	4				NaN	NaN	0	NaN	4807	2800	7605
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7610	22.471	NaN	5245.3	30	0	1322.5	0.106			+	17292	IADATNKDI	9	69	480.753932706689	959.493312480178	2	480.7530517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IADATNKDI_	REV__ENSG00000133243|ENST00000255608|BTBD2;REV__ENST00000587225.1_1_19:1989877-1990887:-|nuORF;REV__ENST00000589685.2_1_19:1986489-1990887:-|nuORF	77.31757898189308	0.1091473830098891	4				NaN	NaN	0	NaN	4808	2800	7605
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7611	22.473	NaN	9299.2	30	0	761	0.035	+			41458	SVNNPILRK	9	85	520.8146578659598	1039.6147627987195	2	520.8146362304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVNNPILRK_	ENSG00000089022|ENST00000550735|MAPKAPK5;nc|ENSG00000089022|Q8IW41|MAPKAPK5	93.5975768576971	0.05472259948179787	4				NaN	NaN	0	NaN	4809	2800	7605
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7612	22.473	NaN	2409	30	0	416.52	0.143				-1	 	0	68	332.1896118321959	331.1823353655959	1	332.1905212402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4810	2800	7605
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7630	22.511	NaN	36164	30	0	11610	0.214	+			123	AAFGGTFKK	9	77	463.75860391454563	925.5026548958913	2	463.7580871582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAFGGTFKK_	ENSG00000100979|ENST00000372431|PLTP;nc|ENSG00000100979|P55058-4|PLTP;PLTP|p.H154R|1|0.38|ENSG00000100979|chr20:45909540-45909540|T/C|missense_variant	139.97047562133406	0.010493916756945389	4				NaN	NaN	0	NaN	4825	2803	7629
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7631	22.514	NaN	11784	30	0	1202.2	0.106	+			4783	ATNILTATRK	10	73	544.8248143959922	1087.6350758587844	2	544.8250732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATNILTATRK_	ACAP2|p.G547Efs*90|1|0.05|ENSG00000114331|chr3:195295740-195295741|-/TTCTACATATT|frameshift_variant;ACAP2|p.N618Tfs*15|1|0.31|ENSG00000114331|chr3:195292365-195292365|T/-|frameshift_variant;ENSG00000114331|ENST00000326793|ACAP2;ENST00000480906.5_1_3:195057651-195163594:-|nuORF	112.2953585152457	0.0411829880542106	4				NaN	NaN	0	NaN	4826	2803	7629
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7632	22.517	NaN	9315.8	30	0	1994.1	0.106	+			43247	TEWHSSLN	8	70	487.22126275760536	972.4279725820107	2	487.22125244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TEWHSSLN_	CCDC180|p.K1351Sfs*28|1|0.14|ENSG00000197816|chr9:97364063-97364063|C/-|frameshift_variant;CCDC180|p.K1583Nfs*17|3|0.32|ENSG00000197816|chr9:97374551-97374551|C/-|frameshift_variant;CCDC180|p.L667Tfs*8|1|0.13|ENSG00000197816|chr9:97330353-97330354|-/A|frameshift_variant;CCDC180|p.S1054Lfs*19|1|0.44|ENSG00000197816|chr9:97354591-97354591|T/-|frameshift_variant;ENSG00000197816|ENST00000529487|CCDC180;ENST00000375206.6_1_9:100053158-100139173:+|nuORF;ENST00000460482.6_1_9:100070037-100107975:+|nuORF;ENST00000494917.6_1_9:100069637-100105846:+|nuORF;ENST00000529787.2_1_9:100053158-100088872:+|nuORF;nc|ENSG00000197816|Q9P1Z9|CCDC180	37.15910966729921	0.6739408393984688	4				NaN	NaN	0	NaN	4827	2803	7629
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7633	22.518	NaN	10527	30	0	1747.4	0.106	+			47031	VLCPPPVKK	9	68	490.80175519464547	979.588957456091	2	490.80145263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VLCPPPVKK_	ENSG00000136238|ENST00000348035|RAC1;ENSG00000169750|ENST00000306897|RAC3;ENST00000419413.1_1_X:136523419-136523611:-|nuORF;ENST00000488373.5_1_7:6415539-6442074:+|nuORF;nc|ENSG00000136238|P63000-2|RAC1	82.24051045832904	0.08786059719216216	4				NaN	NaN	0	NaN	4828	2803	7629
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7634	22.52	NaN	2457.6	30	0	798.87	0.106				-1	 	0	54	332.1896118321959	331.1823353655959	1	333.1922302246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4829	2803	7629
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7635	22.522	NaN	7027	30	0	1417	0.038	+			51266	YRLFTQKLQ	9	70	598.842529296875	NaN	0	598.842529296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YRLFTQKLQ_	ENSG00000162645|ENST00000370466|GBP2	27.047317107675042	0.34101084205454363	4				NaN	NaN	0	NaN	4830	2803	7629
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7636	22.523	NaN	4228.5	30	0	794.07	0.141			+	-1	MPCWSGDEM	9	56	536.1818237304688	NaN	0	536.1818237304688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_MPCWSGDEM(Oxidation (M))_	REV__ENSG00000131788|ENST00000393045|PIAS3	18.324413293986947	0.3749620627292244	4				NaN	NaN	0	NaN	4831	2803	7629
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7654	22.56	NaN	7136.8	30	0	1225.9	0.214	+			20088	KEKHYYIGI	9	78	575.8166973863898	1149.6188418395795	2	575.8165283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEKHYYIGI_	CP|p.K282Nfs*23|1|0.33|ENSG00000047457|chr3:149207553-149207553|T/-|frameshift_variant;ENSG00000047457|ENST00000264613|CP;ENST00000490639.5_1_3:148895590-148939579:-|nuORF	71.29570347882199	0.13518600952103718	4				NaN	NaN	0	NaN	4846	2806	7653
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7655	22.564	NaN	14254	30	0	1628.3	0.106			+	7975	DSTRMLLGQ	9	71	510.76083085794005	1019.5071087826801	2	510.7607727050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DSTRMLLGQ_	REV__ENST00000233336.6_1_2:113288860-113289121:+|nuORF	122.1759843771914	0.019882474861609503	4				NaN	NaN	0	NaN	4847	2806	7653
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7656	22.566	NaN	9645.2	30	0	1533.7	0.106			+	20586	KFYFRKGTA	9	64	559.311609472099	1116.608666010998	2	559.3113403320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KFYFRKGTA_	REV__CLCA1|p.N76_V77insLLF|1|0.06|ENSG00000016490|chr1:86473481-86473482|-/CTTGTTATT|inframe_insertion;REV__CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;REV__ENSG00000016490|ENST00000394711|CLCA1	58.78195531508484	0.22376836668196862	4				NaN	NaN	0	NaN	4848	2806	7653
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7657	22.568	NaN	9341.8	30	0	1652.8	0.106			+	32196	QSVGEKPVE	9	71	486.7535832214471	971.4926135096943	2	486.7530822753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QSVGEKPVE_	REV__ENST00000594582.1_1_19:49218521-49220230:-|nuORF	63.53385203322761	0.18415635464017938	4				NaN	NaN	0	NaN	4849	2806	7653
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7658	22.57	NaN	5822.6	30	0	944.55	0.106	+			6401	AVVGGLDIHKK	11	67	568.843505859375	NaN	0	568.843505859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVVGGLDIHKK_	ENSG00000221823|ENST00000234310|PPP3R1	49.280055037864464	0.3204896447017342	4				NaN	NaN	0	NaN	4850	2806	7653
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7659	22.571	NaN	7567.4	30	0	919.09	0.035	+			48290	VTDSPRILK	9	71	514.8090294801614	1027.6035060271226	2	514.8088989257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTDSPRILK_	ENSG00000142197|ENST00000691173|DOP1B;nc|ENSG00000142197|Q9Y3R5-2|DOP1B	136.98908636845044	0.011892605960677736	4				NaN	NaN	0	NaN	4851	2806	7653
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7660	22.572	NaN	3308.8	30	0	513.39	0.14			+	28573	NKIALPQYD	9	64	531.2828979492188	NaN	0	531.2828979492188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NKIALPQYD_	REV__ENSG00000157423|ENST00000393567|HYDIN;REV__HYDIN|p.E2653Kfs*4|1|0.27|ENSG00000157423|chr16:70918259-70918259|T/-|frameshift_variant;REV__HYDIN|p.F4256Vfs*111|1|0.27|ENSG00000157423|chr16:70849833-70849834|-/C|frameshift_variant;REV__HYDIN|p.I1986Nfs*6|1|0.45|ENSG00000157423|chr16:70961970-70961971|-/T|frameshift_variant;REV__HYDIN|p.R1703Lfs*51|1|0.5|ENSG00000157423|chr16:70973950-70973951|-/GA|frameshift_variant;REV__HYDIN|p.V3416Gfs*64|1|0.15|ENSG00000157423|chr16:70879725-70879726|-/ACTCC|frameshift_variant	39.252832667884924	0.27938773122138094	4				NaN	NaN	0	NaN	4852	2806	7653
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7678	22.61	NaN	24385	30	0	4511.6	0.214	+			45070	TVHNIIVGK	9	125	327.534205472072	979.580787016416	3	327.5343017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVHNIIVGK_	ENSG00000110048|ENST00000263847|OSBP;ENSG00000184792|ENST00000332585|OSBP2;nc|ENSG00000184792|Q969R2-2|OSBP2;nc|ENSG00000184792|Q969R2-3|OSBP2;nc|ENSG00000184792|Q969R2-4|OSBP2;nc|ENSG00000184792|Q969R2-5|OSBP2;nc|ENSG00000184792|Q969R2-6|OSBP2	84.9155231211612	0.07920012719736333	4				NaN	NaN	0	NaN	4867	2809	7677
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7679	22.614	NaN	14613	30	0	2055.2	0.106	+			16899	HPIQTQAQY	9	79	543.2721607620357	1084.5297685908713	2	543.2728881835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HPIQTQAQY_	ENSG00000161813|ENST00000398473|LARP4;ENST00000521120.1_1_12:50835423-50848201:+|nuORF;LARP4|p.N373Ifs*3|1|0.26|ENSG00000161813|chr12:50454408-50454408|A/-|frameshift_variant;nc|ENSG00000161813|Q71RC2-2|LARP4;nc|ENSG00000161813|Q71RC2-3|LARP4;nc|ENSG00000161813|Q71RC2-4|LARP4;nc|ENSG00000161813|Q71RC2-6|LARP4;nc|ENSG00000161813|Q71RC2-7|LARP4	75.04331003522576	0.118981335847003	4				NaN	NaN	0	NaN	4868	2809	7677
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7680	22.616	NaN	8596.5	30	0	1445.1	0.106	+			5831	AVIGNVQEK	9	64	479.2720628990253	956.5295728648506	2	479.2717590332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVIGNVQEK_	ENSG00000124786|ENST00000644923|SLC35B3;nc|ENSG00000124786|Q9H1N7-3|SLC35B3	93.1432384553994	0.056003526918089595	4				NaN	NaN	0	NaN	4869	2809	7677
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7681	22.617	NaN	3278.8	30	0	467.78	0.034	+			16441	HESLSHEL	8	53	476.2294921875	NaN	0	476.2294921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HESLSHEL_	ENSG00000121039|ENST00000240285|RDH10	47.91560031466742	1.7418937515398478	4				NaN	NaN	0	NaN	4870	2809	7677
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7699	22.654	NaN	155170	30	0	17403	0.206	+			3806	ATAGIIGVNRK	11	116	550.3327922546595	1098.6510315761188	2	550.332763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATAGIIGVNRK_	CLTC-CEP95|1|fusion;CLTC|p.A1374*|1|0.05|ENSG00000141367|chr17:59683464-59683465|-/TA|frameshift_variant;CLTC|p.D632Yfs*7|1|0.15|ENSG00000141367|chr17:59666589-59666590|-/TTACA|frameshift_variant;ENSG00000141367|ENST00000269122|CLTC;ENST00000472129.3_1_17:57725612-57733400:+|nuORF;nc|ENSG00000141367|Q00610-2|CLTC	175.3250769318428	1.3930512482767607E-05	4				NaN	NaN	0	NaN	4885	2812	7698
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7700	22.657	NaN	21645	30	0	1860.9	0.106	+			39925	STMDLVKSK	9	92	504.7733875411185	1007.532222149037	2	504.7731018066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STMDLVKSK_	ENSG00000107625|ENST00000373585|DDX50	128.60217544463768	0.015992218256422188	4				NaN	NaN	0	NaN	4886	2812	7698
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7701	22.659	NaN	24710	30	0	9180.3	0.106				-1	STDLAMKKV	9	87	336.85085887008654	1007.5307472104596	3	336.85101318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_STDLAM(Oxidation (M))KKV_	tr|U7SXA5|U7SXA5_FUSNULipoproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00955PE=4SV=1	26.69291269510374	0.5537881896960711	4				NaN	NaN	0	NaN	4887	2812	7698
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7702	22.661	NaN	21341	30	0	2123.9	0.106			+	29471	PCQTSEVLMR	10	86	590.2783335169307	1178.5421141006614	2	590.2781372070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_PCQTSEVLM(Oxidation (M))R_	REV__FAM178B|p.K398Sfs*35|1|0.13|ENSG00000168754|chr2:96960426-96960426|T/-|frameshift_variant	67.49366992349736	0.29779660154124327	4				NaN	NaN	0	NaN	4888	2812	7698
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7703	22.663	NaN	7893.6	30	0	2985.6	0.106			+	26803	LVSKTKPKP	9	69	333.21815716821413	996.6326421048425	3	333.2181701660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LVSKTKPKP_	REV__ENSG00000152582|ENST00000356031|SPEF2;REV__nc|ENSG00000152582|Q9C093-2|SPEF2;REV__SPEF2|p.I1348Nfs*12|1|0.34|ENSG00000152582|chr5:35773981-35773982|-/A|frameshift_variant	30.317721548370564	0.5199124245378496	4				NaN	NaN	0	NaN	4889	2812	7698
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7704	22.665	NaN	7701.1	30	0	1343.1	0.037	+			41997	SVYGYGVQKR	10	64	578.8091637473409	NaN	0	578.8092041015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVYGYGVQKR_	ENSG00000107164|ENST00000319725|FUBP3;FUBP3|p.P395Lfs*27|2|0.27|ENSG00000107164|chr9:130630689-130630689|C/-|frameshift_variant	79.71258880314673	0.10087619412066733	4				NaN	NaN	0	NaN	4890	2812	7698
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7705	22.665	NaN	17014	30	0	1193.1	0.146				-1	EREMRQKKLEK	11	93	745.9076805617199	1489.8008081902396	2	745.9063720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_EREM(Oxidation (M))RQKKLEK_	ENSG00000112079|ENST00000229812|STK38;STK38|p.F382Lfs*70|1|0.16|ENSG00000112079|chr6:36497806-36497806|A/-|frameshift_variant	36.446750945000026	0.6065623449959539	4				NaN	NaN	0	NaN	4891	2812	7698
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7723	22.704	NaN	31776	30	0	4383.5	0.214	+			4210	ATFYGPVKK	9	79	505.7872894287338	1009.5600259242676	2	505.787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATFYGPVKK_	ENSG00000036257|ENST00000264414|CUL3;ENST00000487558.1_1_2:225360464-225362517:-|nuORF;nc|ENSG00000036257|Q13618-2|CUL3;nc|ENSG00000036257|Q13618-3|CUL3	134.81075121484326	0.012914550297035062	4				NaN	NaN	0	NaN	4906	2815	7722
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7724	22.707	NaN	14161	30	0	1462.3	0.106	+			20335	KERIGNLK	8	66	479.29567717795794	956.5768014227159	2	479.2955322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KERIGNLK_	tr|U7T668|U7T668_FUSNUHTHcro/C1-typedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00128PE=4SV=1	98.62937762414208	0.25143494708580966	4				NaN	NaN	0	NaN	4907	2815	7722
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7725	22.71	NaN	10862	30	0	1455.5	0.106	+			41319	SVLQECEKK	9	70	532.2760563550692	1062.5375597769382	2	532.276123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVLQECEKK_	ENSG00000173193|ENST00000474629|PARP14;nc|ENSG00000173193|Q460N5-1|PARP14;nc|ENSG00000173193|Q460N5-3|PARP14;nc|ENSG00000173193|Q460N5-4|PARP14;nc|ENSG00000173193|Q460N5-5|PARP14;PARP14|p.N1416Efs*19|1|0.2|ENSG00000173193|chr3:122718388-122718389|-/A|frameshift_variant	148.98678547993487	0.0071052929883181565	4				NaN	NaN	0	NaN	4908	2815	7722
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7726	22.711	NaN	5126.4	30	0	649.49	0.106	+			24172	LENQSHETL	9	70	535.7594723743108	NaN	0	535.7596435546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LENQSHETL_	ENSG00000132688|ENST00000368223|NES;NES|p.A1050Pfs*14|1|0.36|ENSG00000132688|chr1:156671040-156671040|C/-|frameshift_variant;NES|p.P1439Qfs*11|1|0.19|ENSG00000132688|chr1:156669874-156669874|C/-|frameshift_variant;NES|p.V1249Cfs*11|1|0.37|ENSG00000132688|chr1:156670443-156670443|C/-|frameshift_variant	49.44154591367651	0.21054156626303966	4				NaN	NaN	0	NaN	4909	2815	7722
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7727	22.713	NaN	3087.8	30	0	1016.3	0.106			+	13578	GLVAPLGDFR	10	60	348.86581284073804	1043.575609122414	3	348.865966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GLVAPLGDFR_	REV__ENSG00000204610|ENST00000376694|TRIM15	26.79610172149135	0.6610034878437611	4				NaN	NaN	0	NaN	4910	2815	7722
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7728	22.715	NaN	8591.3	30	0	1223.7	0.038			+	9840	EPPRERNLVP	10	71	603.831059365783	1205.6475657983658	2	603.8313598632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EPPRERNLVP_	REV__ENST00000591574.5_1_17:76698278-76704312:-|nuORF	56.632244143249146	0.3964695498866976	4				NaN	NaN	0	NaN	4911	2815	7722
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7729	22.716	NaN	4351.3	30	0	838.46	0.141			+	-1	NEPAPADMY	9	67	512.208421199085	1022.4022894649701	2	512.2084350585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_NEPAPADM(Oxidation (M))Y_	REV__ENSG00000101680|ENST00000389658|LAMA1;REV__ENST00000579014.5_1_18:6942080-7042306:-|nuORF	27.882242232435846	0.5426732730940306	4				NaN	NaN	0	NaN	4912	2815	7722
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7747	22.753	NaN	17224	30	0	3899.5	0.214			+	10276	ETLSKGLVVA	10	103	339.5375974223931	1015.5909628673794	3	339.5377197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ETLSKGLVVA_	REV__ENSG00000124406|ENST00000381668|ATP8A1;REV__nc|ENSG00000124406|Q9Y2Q0-2|ATP8A1;REV__nc|ENSG00000124406|Q9Y2Q0-3|ATP8A1	60.97194046774394	0.3570005369683776	4				NaN	NaN	0	NaN	4927	2818	7746
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7748	22.757	NaN	7610.5	30	0	1592.8	0.106	+			46554	VFICRLIC	8	96	322.8464639741664	965.5175625226992	3	322.84661865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VFICRLIC_	ENST00000477377.1_1_13:76104099-76111947:-|nuORF	39.021493756699265	0.6623843612266921	4				NaN	NaN	0	NaN	4928	2818	7746
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7749	22.759	NaN	5861	30	0	593.4	0.106	+			18467	ISFDASKAK	9	72	483.76663892375007	965.5187249143002	2	483.7662353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ISFDASKAK_	ENSG00000075568|ENST00000186436|TMEM131;TMEM131|p.G555Wfs*10|1|0.32|ENSG00000075568|chr2:97812704-97812705|-/A|frameshift_variant;TMEM131|p.L1469Tfs*5|1|0.43|ENSG00000075568|chr2:97772340-97772341|-/T|frameshift_variant;TMEM131|p.L538Ffs*27|1|0.09|ENSG00000075568|chr2:97813974-97813975|-/A|frameshift_variant;TMEM131|p.N815Ifs*2|1|0.27|ENSG00000075568|chr2:97802749-97802749|T/-|frameshift_variant;TMEM131|p.N815Kfs*9|1|0.31|ENSG00000075568|chr2:97802748-97802749|-/T|frameshift_variant	138.06239232086	0.011389075116295402	4				NaN	NaN	0	NaN	4929	2818	7746
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7750	22.76	NaN	50002	30	0	23151	0.106			+	-1	SARDMIWI	8	102	336.5038847408615	1006.4898248227846	3	336.5041198730469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_SARDM(Oxidation (M))IWI_	REV__ENSG00000066933|ENST00000356056|MYO9A;REV__nc|ENSG00000066933|B2RTY4-2|MYO9A;REV__nc|ENSG00000066933|B2RTY4-4|MYO9A;REV__nc|ENSG00000066933|B2RTY4-5|MYO9A	40.77816245573522	0.6514838689002179	4				NaN	NaN	0	NaN	4930	2818	7746
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7751	22.762	NaN	7538.5	30	0	5064	0.106	+			31944	QQQQESAR	8	55	487.73583424236205	973.4571155515241	2	487.73541259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QQQQESAR_	ENSG00000146457|ENST00000621533|WTAP;ENST00000416077.1_1_6:51274881-51275238:-|nuORF;nc|ENSG00000146457|Q15007-2|WTAP	25.450171626174864	0.7628259754767981	4				NaN	NaN	0	NaN	4931	2818	7746
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7752	22.764	NaN	15988	30	0	1716.2	0.039			+	50006	WARTCFFILH	10	84	647.3313743473608	1292.6481957615215	2	647.3310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_WARTCFFILH_	REV__ENSG00000188211|ENST00000338965|NCR3LG1	56.72105179125745	0.3956618550748046	4				NaN	NaN	0	NaN	4932	2818	7746
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7753	22.765	NaN	6739.7	30	0	1153	0.143				-1	 	0	76	631.3465887742706	630.3393123076705	1	631.3468017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4933	2818	7746
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7771	22.804	NaN	8100	30	0	984.46	0.214	+			37100	SISQVLNKK	9	77	508.80875274235916	1015.6029525515183	2	508.8085632324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SISQVLNKK_	ENST00000330689.5_1_3:122134566-122134782:-|nuORF	139.97047562133406	0.010493916756945389	4				NaN	NaN	0	NaN	4948	2821	7770
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7772	22.808	NaN	11960	30	0	4180.3	0.106			+	35420	SARLSDTHP	9	84	328.501432881382	982.482469244346	3	328.50164794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SARLSDTHP_	REV__ENSG00000163214|ENST00000457308|DHX57	18.324413293986947	0.6112419832031293	4				NaN	NaN	0	NaN	4949	2821	7770
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7773	22.81	NaN	12284	30	0	1537.5	0.106	+			12484	GEDTGRVHL	9	89	492.2490937108611	982.4836344885222	2	492.2487487792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEDTGRVHL_	ENSG00000109686|ENST00000604030|SH3D19;ENST00000478503.6_1_4:152043245-152086876:-|nuORF;LRBA-SH3D19|2|fusion;LRBA-SH3D19|3|fusion;nc|ENSG00000109686|Q5HYK7-2|SH3D19;nc|ENSG00000109686|Q5HYK7-3|SH3D19;nc|ENSG00000109686|Q5HYK7-4|SH3D19;nc|ENSG00000109686|Q5HYK7-5|SH3D19;nc|ENSG00000109686|Q5HYK7|SH3D19	77.31757898189308	0.1091473830098891	4				NaN	NaN	0	NaN	4950	2821	7770
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7774	22.812	NaN	5562.4	30	0	1099	0.106	+			28635	NLCFSLGHV	9	91	330.5002528871733	988.4789292617199	3	330.50054931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NLCFSLGHV_	PLXNB1|p.R1469C|1|0.5|ENSG00000164050|chr3:48413800-48413800|G/A|missense_variant	26.79610172149135	0.5528238334041078	4				NaN	NaN	0	NaN	4951	2821	7770
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7775	22.813	NaN	3697.4	30	0	348.32	0.106			+	30931	QELLVAARK	9	64	514.3170819789316	1026.619611024663	2	514.3168334960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QELLVAARK_	REV__ENSG00000087365|ENST00000322535|SF3B2	51.19269402634007	0.2889735674168909	4				NaN	NaN	0	NaN	4952	2821	7770
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7776	22.815	NaN	11762	30	0	1804.1	0.037			+	28470	NFVKRILTR	9	77	573.859293275473	1145.7040336177458	2	573.8591918945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NFVKRILTR_	REV__ENST00000266508.13_1_12:19671564-19671651:+|nuORF;REV__nc|ENSG00000139154|Q6ZN18-3|AEBP2;REV__nc|ENSG00000139154|Q6ZN18|AEBP2	21.9598887501803	0.5980208138527809	4				NaN	NaN	0	NaN	4953	2821	7770
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7777	22.816	NaN	2865.8	30	0	479.07	0.14				-1	 	0	58	425.21763405465373	848.4207151761075	2	425.2178039550781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4954	2821	7770
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7795	22.855	NaN	13739	30	0	1687.9	0.215			+	26150	LSQHETSI	8	67	457.73256659000253	913.4505802468051	2	457.73223876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSQHETSI_	REV__ENSG00000143452|ENST00000361824|HORMAD1;REV__HORMAD1|p.N235Ifs*12|1|0.22|ENSG00000143452|chr1:150706653-150706653|T/-|frameshift_variant;REV__nc|ENSG00000143452|Q86X24-2|HORMAD1	111.64827973302667	0.24425243057279236	4				NaN	NaN	0	NaN	4969	2824	7794
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7796	22.859	NaN	9104.7	30	0	1471.2	0.106	+			15015	GTNFPNKIEK	10	84	574.309280968026	1146.6040090028519	2	574.3090209960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTNFPNKIEK_	ENSG00000027001|ENST00000382172|MIPEP;ENST00000494139.1_1_13:24416692-24444322:-|nuORF;MIPEP|p.Q439Sfs*19|1|0.32|ENSG00000027001|chr13:23839673-23839673|A/-|frameshift_variant	77.28774426308219	0.21777985819004636	4				NaN	NaN	0	NaN	4970	2824	7794
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7797	22.861	NaN	7059.9	30	0	843.08	0.106	+			5513	AVAEVRAENLK	11	79	600.340850750286	1198.667148567372	2	600.3411865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVAEVRAENLK_	ENSG00000047410|ENST00000367478|TPR;ENST00000469463.1_1_1:186321098-186322975:-|nuORF;TPR|p.E1141Dfs*29|1|0.08|ENSG00000047410|chr1:186344085-186344086|-/CAGGTAAA|frameshift_variant;TPR|p.P2083Qfs*3|1|0.31|ENSG00000047410|chr1:186323735-186323735|G/-|frameshift_variant;TPR|p.T2133Lfs*63|1|0.03|ENSG00000047410|chr1:186322382-186322383|-/GTACTAATAAG|frameshift_variant;TPR|p.V1142Efs*26|1|0.08|ENSG00000047410|chr1:186344083-186344084|-/TT|frameshift_variant	117.5257442709337	0.024937134902278984	4				NaN	NaN	0	NaN	4971	2824	7794
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7798	22.863	NaN	7984.6	30	0	1651.4	0.106	+			27276	MFRSMDTI	8	57	500.73291548375744	999.4512780343149	2	500.7325744628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MFRSMDTI_	CDT1|p.Q285Sfs*33|1|0.46|ENSG00000167513|chr16:88806036-88806036|C/-|frameshift_variant;ENSG00000167513|ENST00000301019|CDT1	53.351449002276354	0.5676011784961348	4				NaN	NaN	0	NaN	4972	2824	7794
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7799	22.864	NaN	3807.7	30	0	781.6	0.106				-1	 	0	65	384.77194138195927	767.5293298307186	2	384.7720031738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	4973	2824	7794
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7800	22.866	NaN	7101.9	30	0	877.97	0.036	+			42746	TDLQKVSDL	9	68	340.18553424113884	1017.5347733236165	3	340.1856384277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TDLQKVSDL_	ENSG00000007202|ENST00000528896|BLTP2;ENST00000577417.5_1_17:26966838-26970337:-|nuORF;ENST00000580882.5_1_17:26966325-26972074:-|nuORF;nc|ENSG00000007202|Q14667-2|BLTP2	44.116797842482775	0.37197099687881774	4				NaN	NaN	0	NaN	4974	2824	7794
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7801	22.867	NaN	7566.3	30	0	971.74	0.143	+			5957	AVLKPGAWSRK	11	66	606.8641271643977	1211.7137013955953	2	606.8642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AVLKPGAWSRK_	ENST00000308521.9_1_22:39436844-39436913:+|nuORF	57.148748479083515	0.34890646465650643	4				NaN	NaN	0	NaN	4975	2824	7794
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7819	22.904	NaN	98470	30	0	25812	0.198	+			40587	SVAGDFVKK	9	98	475.76890182568576	949.5232507181715	2	475.76873779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVAGDFVKK_	ENSG00000165238|ENST00000427277|WNK2;nc|ENSG00000165238|Q9Y3S1-2|WNK2;nc|ENSG00000165238|Q9Y3S1-4|WNK2;nc|ENSG00000165238|Q9Y3S1|WNK2;WNK2|p.T1980Lfs*12|2|0.16|ENSG00000165238|chr9:93297965-93297965|C/-|frameshift_variant	176.44474024533739	0.0016668318535579616	4				NaN	NaN	0	NaN	4990	2827	7818
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7820	22.908	NaN	11184	30	0	4078.3	0.106	+			5980	AVLQEYRK	8	76	336.1941052816153	1005.5604864450459	3	336.1941833496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVLQEYRK_	ENSG00000175054|ENST00000350721|ATR;nc|ENSG00000175054|Q13535-2|ATR;nc|ENSG00000175054|Q13535-3|ATR	28.2542754592877	0.7411748056684583	4				NaN	NaN	0	NaN	4991	2827	7818
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7821	22.91	NaN	4043	30	0	458.74	0.106			+	26691	LVHLVMGLV	9	54	490.80175519464547	979.588957456091	2	490.80145263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LVHLVMGLV_	REV__ENST00000265362.8_1_7:83606489-83610685:-|nuORF	55.50420428727701	0.2510918378945873	4				NaN	NaN	0	NaN	4992	2827	7818
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7822	22.912	NaN	4032.7	30	0	311.59	0.106			+	15725	GVRSREVPI	9	68	338.2015636943087	1011.5828616831261	3	338.2018737792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GVRSREVPI_	REV__ENSG00000106278|ENST00000393386|PTPRZ1;REV__nc|ENSG00000106278|P23471-2|PTPRZ1;REV__nc|ENSG00000106278|P23471-3|PTPRZ1	24.20275056022122	0.577060078256802	4				NaN	NaN	0	NaN	4993	2827	7818
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7823	22.914	NaN	3139.1	30	0	593.35	0.106	+			43834	TLSSTKAK	8	56	418.24637349586123	834.4781940585225	2	418.2465515136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TLSSTKAK_	ENSG00000170214|ENST00000306675|ADRA1B	19.359975847455235	0.7988239741663654	4				NaN	NaN	0	NaN	4994	2827	7818
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7824	22.915	NaN	4781.1	30	0	625.01	0.106				-1	HCEDAAPAGP	10	68	512.7118930028234	1023.4092330724469	2	512.7114868164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_HC(Carbamidomethyl (C))EDAAPAGP_	ENST00000553532.5_2_12:56817145-56817181:-|nuORF	29.14955571784316	0.6417842315402807	4				NaN	NaN	0	NaN	4995	2827	7818
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7825	22.917	NaN	1993	30	0	231.83	0.034			+	38056	SPRRAGKY	8	60	467.7640540923459	933.5135552514918	2	467.7633972167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SPRRAGKY_	REV__MER49_dup1305|chr21:41210187-41211078:+|1.209497246225798|0.4412608656295442|1.45|483.0|29|1|anti-sense	33.51558372728122	0.7005509609380386	4				NaN	NaN	0	NaN	4996	2827	7818
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7843	22.954	NaN	28041	30	0	3255.5	0.214	+			5084	ATSLVFKQK	9	86	511.3059753887024	1020.5973978442048	2	511.30572509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSLVFKQK_	ENSG00000227345|ENST00000616448|PARG;PARG|p.D904Tfs*4|1|0.16|ENSG00000227345|chr10:49820231-49820231|C/-|frameshift_variant;PARG|p.N277Mfs*5|3|0.4|ENSG00000227345|chr10:49933618-49933618|T/-|frameshift_variant	190.51785368661015	0.00024017880420896124	4				NaN	NaN	0	NaN	5011	2830	7842
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7844	22.958	NaN	45059	30	0	12252	0.106			+	42398	TAIVSFGKKA	10	91	341.2060135194365	1020.5962111585095	3	341.20611572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAIVSFGKKA_	REV__tr|U7SLX9|U7SLX9_FUSNUATPasedynein-relatedAAAdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01982PE=4SV=1	21.9598887501803	0.7004979571547932	4				NaN	NaN	0	NaN	5012	2830	7842
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7845	22.96	NaN	7936.5	30	0	755.32	0.106	+			26769	LVQGSILKK	9	66	493.3241939083463	984.6338348834926	2	493.32373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LVQGSILKK_	ENSG00000132646|ENST00000379143|PCNA	106.68306549817024	0.032382560583716295	4				NaN	NaN	0	NaN	5013	2830	7842
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7846	22.962	NaN	3764.8	30	0	391.08	0.106	+			6310	AVTASWVVR	9	81	330.1905339277405	987.5497723834214	3	330.1907653808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVTASWVVR_	ENST00000401088.8_1_1:16721635-16721806:+|nuORF	25.57405402267927	0.5642445186134241	4				NaN	NaN	0	NaN	5014	2830	7842
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7847	22.963	NaN	4749.5	30	0	1196.9	0.106			+	22535	KTRFYKFQ	8	63	559.311609472099	1116.608666010998	2	559.3119506835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KTRFYKFQ_	REV__ENST00000380026.7_2_4:104037830-104041339:-|nuORF	42.396135135203025	0.6414440140393314	4				NaN	NaN	0	NaN	5015	2830	7842
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7848	22.965	NaN	7387.9	30	0	2607.2	0.036	+			4866	ATPTSPIRVK	10	62	535.3220267138607	1068.6295004945214	2	535.3223266601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATPTSPIRVK_	ENSG00000196924|ENST00000369850|FLNA;FLNA|p.A1026Lfs*20|1|0.42|ENSG00000196924|chrX:154361439-154361439|C/-|frameshift_variant;FLNA|p.G2237Efs*109|1|0.28|ENSG00000196924|chrX:154352240-154352240|C/-|frameshift_variant;FLNA|p.Q1716Sfs*23|2|0.38|ENSG00000196924|chrX:154354896-154354896|G/-|frameshift_variant;FLNA|p.R2520Vfs*16|1|0.7|ENSG00000196924|chrX:154349560-154349560|G/-|frameshift_variant;nc|ENSG00000196924|P21333-2|FLNA	58.22992032128504	0.38193887838457763	4				NaN	NaN	0	NaN	5016	2830	7842
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7849	22.966	NaN	1988	30	0	330.58	0.139			+	-1	TPCHHLPL	8	53	487.74774169921875	NaN	0	487.74774169921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_TPC(Carbamidomethyl (C))HHLPL_	REV__SLC4A2|p.E125Rfs*120|1|0.33|ENSG00000164889|chr7:151064677-151064677|G/-|frameshift_variant	29.841539824830324	1.7418937515398478	4				NaN	NaN	0	NaN	5017	2830	7842
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7867	23.005	NaN	11519	30	0	1733	0.214	+			14149	GSMSTVVSTK	10	71	498.75532100100656	995.4960890688131	2	498.75494384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSMSTVVSTK_	ENSG00000164327|ENST00000357387|RICTOR;nc|ENSG00000164327|Q6R327-3|RICTOR;RICTOR|p.S1495Pfs*13|1|0.05|ENSG00000164327|chr5:38945642-38945643|-/ATTCTGGG|frameshift_variant	122.93914200107957	0.02317863035582428	4				NaN	NaN	0	NaN	5032	2833	7866
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7868	23.008	NaN	7999.4	30	0	1596.1	0.106	+			1046	AEKNSNVETL	10	68	552.7806783353313	1103.5468037374626	2	552.7806396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEKNSNVETL_	ENSG00000113522|ENST00000378823|RAD50;nc|ENSG00000113522|Q92878-2|RAD50;nc|ENSG00000113522|Q92878-3|RAD50;RAD50|p.K501R|1|0.11|ENSG00000113522|chr5:132591273-132591273|A/G|missense_variant;RAD50|p.K722Gfs*5|1|0.35|ENSG00000113522|chr5:132595760-132595761|AA/-|frameshift_variant;RAD50|p.N934Ifs*6|1|0.26|ENSG00000113522|chr5:132608690-132608690|A/-|frameshift_variant	104.42354056486148	0.06456012287859861	4				NaN	NaN	0	NaN	5033	2833	7866
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7869	23.011	NaN	4124.2	30	0	907.7	0.106	+			27893	MTPTEKKQ	8	58	481.75246178315734	961.4903706331147	2	481.75201416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MTPTEKKQ_	ENSG00000177692|ENST00000381947|DNAJC28	35.61828744233558	0.6843154725607303	4				NaN	NaN	0	NaN	5034	2833	7866
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7870	23.012	NaN	22334	30	0	8125.1	0.106	+			48433	VTKIQLRL	8	92	324.2182218623477	969.6328361872431	3	324.2181701660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTKIQLRL_	LOXL2|p.A54T|1|0.09|ENSG00000134013|chr8:23368192-23368192|C/T|missense_variant	29.14955571784316	0.7342621283720113	4				NaN	NaN	0	NaN	5035	2833	7866
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7871	23.014	NaN	5588	30	0	1677.2	0.106	+			31315	QIMEEFYV	8	46	529.7477220223767	1057.4808911115533	2	529.7479248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QIMEEFYV_	SKIL|p.R592I|1|0.05|ENSG00000136603|chr3:170391139-170391139|G/T|missense_variant	37.028477286268924	0.6747514403204248	4				NaN	NaN	0	NaN	5036	2833	7866
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7872	23.016	NaN	3251.6	30	0	409.65	0.034	+			35004	SACGHTAVL	9	52	458.22134615636026	914.4281393795205	2	458.2209167480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_SAC(Carbamidomethyl (C))GHTAVL_	ENSG00000139645|ENST00000267116|ANKRD52	55.50420428727701	0.2510918378945873	4				NaN	NaN	0	NaN	5037	2833	7866
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7873	23.017	NaN	4218.9	30	0	745.31	0.14			+	20342	KERQFDQI	8	58	532.2814653190113	1062.5483777048225	2	532.2819213867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KERQFDQI_	REV__ENSG00000108312|ENST00000436088|UBTF;REV__nc|ENSG00000108312|P17480-2|UBTF	51.33545320467046	0.5859736979383976	4				NaN	NaN	0	NaN	5038	2833	7866
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7891	23.054	NaN	86944	30	0	11791	0.215			+	19038	IYEDRLAK	8	140	336.52214999971045	1006.5446205993314	3	336.5222473144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IYEDRLAK_	REV__ENSG00000183765|ENST00000404276|CHEK2;REV__nc|ENSG00000183765|O96017-12|CHEK2;REV__nc|ENSG00000183765|O96017-4|CHEK2;REV__nc|ENSG00000183765|O96017-7|CHEK2;REV__nc|ENSG00000183765|O96017-8|CHEK2;REV__nc|ENSG00000183765|O96017-9|CHEK2	45.9519527083369	0.6193794311207887	4				NaN	NaN	0	NaN	5053	2836	7890
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7892	23.058	NaN	17661	30	0	1912.4	0.106	+			14268	GSVAGDFVKK	10	90	504.2797387852855	1006.544924637371	2	504.2794494628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSVAGDFVKK_	ENSG00000165238|ENST00000427277|WNK2;nc|ENSG00000165238|Q9Y3S1-2|WNK2;nc|ENSG00000165238|Q9Y3S1-4|WNK2;nc|ENSG00000165238|Q9Y3S1|WNK2;WNK2|p.T1980Lfs*12|2|0.16|ENSG00000165238|chr9:93297965-93297965|C/-|frameshift_variant	181.4070731898895	0.0010958971522004144	4				NaN	NaN	0	NaN	5054	2836	7890
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7893	23.06	NaN	14579	30	0	1986.9	0.106	+			14839	GTLMGSGLRK	10	79	510.2869900460328	1018.5594271588657	2	510.286865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTLMGSGLRK_	ABCB8|p.G460Afs*31|1|0.34|ENSG00000197150|chr7:151040570-151040570|G/-|frameshift_variant;ENSG00000197150|ENST00000358849|ABCB8;ENST00000466514.5_1_7:150731570-150742433:+|nuORF;nc|ENSG00000197150|Q9NUT2-3|ABCB8;nc|ENSG00000197150|Q9NUT2-4|ABCB8;nc|ENSG00000197150|Q9NUT2-5|ABCB8;nc|ENSG00000197150|Q9NUT2|ABCB8	96.0336014099291	0.09653029772959643	4				NaN	NaN	0	NaN	5055	2836	7890
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7894	23.062	NaN	71650	30	0	9882.2	0.106	+			39478	STFDTQITKK	10	99	584.8143254747484	1167.6140980162968	2	584.8143310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STFDTQITKK_	ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC;PRKDC|p.D2437Wfs*3|1|0.11|ENSG00000253729|chr8:47840161-47840162|-/CA|frameshift_variant;PRKDC|p.K3681Nfs*6|1|0.32|ENSG00000253729|chr8:47785174-47785177|TTCT/-|frameshift_variant;PRKDC|p.M3670*|1|0.5|ENSG00000253729|chr8:47785212-47785212|T/-|frameshift_variant;PRKDC|p.M3846Cfs*12|1|0.13|ENSG00000253729|chr8:47779047-47779047|T/-|frameshift_variant;PRKDC|p.M4020Cfs*2|1|0.31|ENSG00000253729|chr8:47776968-47776968|T/-|frameshift_variant;PRKDC|p.N3605Kfs*3|1|0.22|ENSG00000253729|chr8:47788993-47788994|-/T|frameshift_variant;PRKDC|p.N4037Ifs*15|1|0.17|ENSG00000253729|chr8:47776916-47776916|T/-|frameshift_variant;PRKDC|p.R2704Gfs*13|2|0.34|ENSG00000253729|chr8:47834238-47834238|T/-|frameshift_variant;PRKDC|p.S3402Ifs*16|1|0.04|ENSG00000253729|chr8:47799302-47799303|-/AAACCGTGAGTTAGAGGAGGTAA|frameshift_variant;PRKDC|p.S4099Qfs*6|1|0.25|ENSG00000253729|chr8:47774265-47774265|A/-|frameshift_variant;PRKDC|p.T3268Pfs*7|1|0.5|ENSG00000253729|chr8:47803426-47803426|T/-|frameshift_variant;PRKDC|p.W3401Cfs*4|1|0.01|ENSG00000253729|chr8:47799304-47799305|-/AATGAATA|frameshift_variant	195.82877817392193	6.6336511456275775E-06	4				NaN	NaN	0	NaN	5056	2836	7890
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7895	23.064	NaN	10492	30	0	1044.8	0.106			+	30870	QEITEQKEL	9	78	559.2904166561033	1116.5662803790065	2	559.29052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QEITEQKEL_	REV__ENSG00000105063|ENST00000412770|PPP6R1	124.08010499294276	0.018729767491916592	4				NaN	NaN	0	NaN	5057	2836	7890
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7896	23.065	NaN	8814.1	30	0	1260.8	0.035	+			51580	YYLFPSLE	8	66	516.2587369950667	1030.5029210569332	2	516.258544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YYLFPSLE_	ENSG00000113360|ENST00000344624|DROSHA;nc|ENSG00000113360|Q9NRR4-2|DROSHA;nc|ENSG00000113360|Q9NRR4-3|DROSHA;nc|ENSG00000113360|Q9NRR4-4|DROSHA	54.76467175910256	0.5536104764165384	4				NaN	NaN	0	NaN	5058	2836	7890
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7897	23.066	NaN	4985.9	30	0	991.42	0.141			+	23665	LASIKEQYR	9	64	554.3118896484375	NaN	0	554.3118896484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LASIKEQYR_	REV__ENSG00000173230|ENST00000614479|GOLGB1;REV__GOLGB1|p.D2495Tfs*21|1|0.22|ENSG00000173230|chr3:121691867-121691867|T/-|frameshift_variant;REV__GOLGB1|p.K2450Rfs*27|1|0.37|ENSG00000173230|chr3:121692000-121692000|T/-|frameshift_variant;REV__GOLGB1|p.Q2186Sfs*19|1|0.31|ENSG00000173230|chr3:121693952-121693952|G/-|frameshift_variant;REV__nc|ENSG00000173230|Q14789-2|GOLGB1;REV__nc|ENSG00000173230|Q14789-3|GOLGB1;REV__nc|ENSG00000173230|Q14789-4|GOLGB1;REV__nc|ENSG00000173230|Q14789|GOLGB1	53.351449002276354	0.18359631779194618	4				NaN	NaN	0	NaN	5059	2836	7890
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7915	23.105	NaN	46583	30	0	6262.5	0.214	+			5811	AVIENLPKK	9	104	506.31360248637543	1010.6126520395509	2	506.3133850097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVIENLPKK_	DDX10|p.I301Nfs*59|1|0.09|ENSG00000178105|chr11:108688982-108688983|-/A|frameshift_variant;ENSG00000178105|ENST00000322536|DDX10	120.30596017624542	0.02101454110788768	4				NaN	NaN	0	NaN	5074	2839	7914
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7916	23.108	NaN	3108.2	30	0	384.3	0.106			+	46391	VELLKTQK	8	55	479.8003484494518	957.5861439657036	2	479.80010986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VELLKTQK_	REV__ENST00000444901.1_1_21:14899938-14900730:+|nuORF	51.33545320467046	0.5859736979383976	4				NaN	NaN	0	NaN	5075	2839	7914
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7917	23.11	NaN	11121	30	0	1858	0.106			+	-1	CAIEELTGLTT	11	53	596.793176293195	1191.5717996531898	2	596.79345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))CAIEELTGLTT_	REV__ENSG00000108684|ENST00000225823|ASIC2;REV__nc|ENSG00000108684|Q16515|ASIC2	26.69291269510374	0.70980431218767	4				NaN	NaN	0	NaN	5076	2839	7914
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7918	23.112	NaN	10966	30	0	1990.5	0.106			+	-1	QQFGRNDMAGQ	11	69	634.280485557518	NaN	0	634.2804565429688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_QQFGRNDM(Oxidation (M))AGQ_	REV__ENSG00000171365|ENST00000376091|CLCN5	31.634271133179894	0.4244354679066847	4				NaN	NaN	0	NaN	5077	2839	7914
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7919	23.114	NaN	12152	30	0	1068.3	0.106	+			36365	SETAVAKNQAL	11	77	566.3036890237681	1130.5928251143362	2	566.3048095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SETAVAKNQAL_	ENSG00000131473|ENST00000352035|ACLY;nc|ENSG00000131473|P53396-2|ACLY;nc|ENSG00000131473|P53396-3|ACLY	106.88024417677582	0.046463184254991054	4				NaN	NaN	0	NaN	5078	2839	7914
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7920	23.116	NaN	4987.3	30	0	855.16	0.038	+			41034	SVIDDRLKEK	10	61	601.8411865234375	NaN	0	601.8411865234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVIDDRLKEK_	ENSG00000159720|ENST00000290949|ATP6V0D1;ENST00000561658.5_1_16:67486328-67515058:-|nuORF	36.527901853580055	0.380236283444939	4				NaN	NaN	0	NaN	5079	2839	7914
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7921	23.116	NaN	3555.4	30	0	864.16	0.141			+	42285	TAEDGSSRPGE	11	57	553.2401666273988	1104.4657803215975	2	553.2410278320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TAEDGSSRPGE_	REV__ENSG00000187609|ENST00000340951|EXD3;REV__ENST00000487745.5_1_9:140201404-140247406:-|nuORF;REV__nc|ENSG00000187609|Q8N9H8-2|EXD3	31.634271133179894	0.6579734920221648	4				NaN	NaN	0	NaN	5080	2839	7914
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7939	23.156	NaN	10420	30	0	1404.8	0.215	+			46324	VEKKGEKLIL	10	73	386.24812103916486	1155.7225337176947	3	386.2481994628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VEKKGEKLIL_	ENSG00000130638|ENST00000252934|ATXN10;nc|ENSG00000130638|Q9UBB4-2|ATXN10	51.19269402634007	0.44601001148513897	4				NaN	NaN	0	NaN	5095	2842	7938
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7940	23.159	NaN	5272.3	30	0	526.5	0.106				-1	CDSSMDVAQ	9	63	514.6862379314346	1027.357922929669	2	514.6854248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_C(Carbamidomethyl (C))DSSM(Oxidation (M))DVAQ_	ENSG00000145934|ENST00000518659|TENM2;nc|ENSG00000145934|Q9NT68-2|TENM2;TENM2|p.L1667Hfs*17|1|0.05|ENSG00000145934|chr5:168218890-168218891|-/ATCAGCGT|frameshift_variant;TENM2|p.N1524Tfs*20|1|0.1|ENSG00000145934|chr5:168218458-168218458|A/-|frameshift_variant	27.882242232435846	0.5426732730940306	4				NaN	NaN	0	NaN	5096	2842	7938
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7941	23.161	NaN	6578.1	30	0	1032.9	0.106	+			46325	VEKKGEKLIL	10	66	578.8691971063503	1155.7238412795004	2	578.869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VEKKGEKLIL_	ENSG00000130638|ENST00000252934|ATXN10;nc|ENSG00000130638|Q9UBB4-2|ATXN10	50.033510581677724	0.4566913063131936	4				NaN	NaN	0	NaN	5097	2842	7938
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7942	23.163	NaN	4451.9	30	0	1214.8	0.106			+	24333	LFKSYLRH	8	62	532.3042821366553	1062.5940113401105	2	532.3038940429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LFKSYLRH_	REV__ENSG00000150787|ENST00000280362|PTS;REV__ENST00000525645.1_1_11:112097166-112099431:+|nuORF	38.80614096846853	0.6637206697844082	4				NaN	NaN	0	NaN	5098	2842	7938
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7943	23.165	NaN	4748.3	30	0	440.12	0.106			+	26949	LYGLEKKEK	9	61	554.3244615410094	1106.6343701488188	2	554.8129272460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LYGLEKKEK_	REV__ENSG00000185946|ENST00000423855|RNPC3;REV__nc|ENSG00000185946|Q96LT9-2|RNPC3	27.047317107675042	0.5504760921104335	4				NaN	NaN	0	NaN	5099	2842	7938
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7944	23.167	NaN	4342.3	30	0	721.48	0.037				-1	CVCMDQSPQ	9	60	562.7125986137537	1123.4106442943073	2	562.7125244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))VC(Carbamidomethyl (C))MDQSPQ_	ENST00000359904.7_1_17:66244470-66244548:+|nuORF	34.172542307311794	0.4838870758800184	4				NaN	NaN	0	NaN	5100	2842	7938
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7945	23.167	NaN	5125	30	0	799.37	0.141				-1	TNEEPLPKK	9	67	549.2955994557639	1096.5766459783276	2	549.2957763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))TNEEPLPKK_	ENSG00000146457|ENST00000621533|WTAP;ENST00000494513.1_1_6:160148641-160157384:+|nuORF;nc|ENSG00000146457|Q15007-2|WTAP	59.93077597824379	0.21419174904018318	4				NaN	NaN	0	NaN	5101	2842	7938
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7963	23.206	NaN	7790.2	30	0	922.09	0.214	+			44626	TTFELSSRK	9	71	534.7880500333619	NaN	0	534.7880249023438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTFELSSRK_	ENSG00000075539|ENST00000358350|FRYL;FRYL|p.K2264Qfs*11|1|0.13|ENSG00000075539|chr4:48531269-48531270|-/G|frameshift_variant;FRYL|p.L330*|1|0.33|ENSG00000075539|chr4:48602066-48602066|A/-|frameshift_variant;FRYL|p.L330Ffs*3|1|0.35|ENSG00000075539|chr4:48602065-48602066|-/A|frameshift_variant;FRYL|p.P2464Efs*13|1|0.04|ENSG00000075539|chr4:48523032-48523033|-/TATACAATTC|frameshift_variant	56.43379154798735	0.16452882468284893	4				NaN	NaN	0	NaN	5116	2845	7962
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7964	23.209	NaN	12036	30	0	2357.6	0.106			+	-1	SASGRCGRR	9	80	336.1706281136511	1005.4900549411534	3	336.1708068847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SASGRC(Carbamidomethyl (C))GRR_	REV__ENST00000040877.1_1_1:234614313-234614457:-|nuORF	32.81241826257853	0.4965981579233955	4				NaN	NaN	0	NaN	5117	2845	7962
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7965	23.211	NaN	6215.5	30	0	2271.4	0.106			+	32481	QVNDARPQSC	10	74	559.2569680963982	1116.4993832595962	2	559.25732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QVNDARPQSC_	REV__ENST00000375433.3_1_1:17747277-17749232:-|nuORF	44.377184641726394	0.5088115166961078	4				NaN	NaN	0	NaN	5118	2845	7962
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7966	23.213	NaN	10292	30	0	2121	0.106				-1	RTLLCLCRVA	10	85	602.8357221497056	1203.656891366211	2	602.8360595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_RTLLC(Carbamidomethyl (C))LCRVA_	ENSG00000065802|ENST00000264607|ASB1	54.776311868738084	0.41334902933431344	4				NaN	NaN	0	NaN	5119	2845	7962
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7967	23.215	NaN	6428.9	30	0	2607.8	0.106			+	6892	CLPLLLHW	8	86	332.19014073254397	993.5485927978319	3	332.8538818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_CLPLLLHW_	REV__ENSG00000189056|ENST00000428762|RELN;REV__nc|ENSG00000189056|P78509-2|RELN;REV__nc|ENSG00000189056|P78509-3|RELN;REV__RELN|p.A2049V|1|0.23|ENSG00000189056|chr7:103551223-103551223|G/A|missense_variant;REV__RELN|p.C2194Lfs*11|1|0.06|ENSG00000189056|chr7:103542822-103542823|-/TCGTAATGTATAATAG|frameshift_variant;REV__RELN|p.H3353Tfs*46|1|0.25|ENSG00000189056|chr7:103483777-103483777|G/-|frameshift_variant	26.79610172149135	0.7524337208463756	4				NaN	NaN	0	NaN	5120	2845	7962
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7968	23.217	NaN	3640	30	0	515.59	0.035	+			46868	VILDLNTAH	9	65	498.27925228245397	994.543951631708	2	498.2795104980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VILDLNTAH_	ENSG00000176979|ENST00000512596|TRIM60	45.97224482568171	0.3502073465782774	4				NaN	NaN	0	NaN	5121	2845	7962
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7969	23.217	NaN	2924.3	30	0	311.31	0.139	+			5822	AVIGAVYRK	9	63	488.800537109375	NaN	0	488.800537109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AVIGAVYRK_	ENSG00000103222|ENST00000399410|ABCC1;ENST00000574224.1_1_16:16108407-16150188:+|nuORF;nc|ENSG00000103222|P33527-2|ABCC1;nc|ENSG00000103222|P33527-3|ABCC1;nc|ENSG00000103222|P33527-4|ABCC1;nc|ENSG00000103222|P33527-5|ABCC1;nc|ENSG00000103222|P33527-6|ABCC1;nc|ENSG00000103222|P33527-7|ABCC1;nc|ENSG00000103222|P33527-8|ABCC1;nc|ENSG00000103222|P33527-9|ABCC1	38.80614096846853	0.28164298475537564	4				NaN	NaN	0	NaN	5122	2845	7962
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7988	23.256	NaN	35424	30	0	7203.6	0.215	+			4506	ATITKVLQK	9	91	501.32148167203366	1000.6284104108673	2	501.32110595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATITKVLQK_	ENSG00000130589|ENST00000467148|HELZ2;HELZ2|p.D1312G|1|0.12|ENSG00000130589|chr20:63564887-63564887|T/C|missense_variant;HELZ2|p.G2213Vfs*22|1|0.14|ENSG00000130589|chr20:63561876-63561876|C/-|frameshift_variant;HELZ2|p.R2206Vfs*29|2|0.28|ENSG00000130589|chr20:63561898-63561898|G/-|frameshift_variant;nc|ENSG00000130589|Q9BYK8-2|HELZ2;nc|ENSG00000130589|Q9BYK8|HELZ2	180.86945649972546	0.001208757763874378	4				NaN	NaN	0	NaN	5138	2848	7987
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7989	23.259	NaN	31285	30	0	5644.6	0.106	+			17652	IEKFDKSKL	9	86	554.3244615410094	1106.6343701488188	2	554.3244018554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IEKFDKSKL_	ENSG00000154620|ENST00000284856|TMSB4Y;ENSG00000205542|ENST00000451311|TMSB4X;ENST00000323496.5_1_9:131104444-131104642:+|nuORF;TMSB4X|p.A8V|1|0.09|ENSG00000205542|chrX:12976284-12976284|C/T|missense_variant	147.30332882356183	0.0074976797444588125	4				NaN	NaN	0	NaN	5139	2848	7987
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7990	23.261	NaN	41223	30	0	11122	0.106	+			43213	TEVKKIYKL	9	83	561.3505198011943	1120.6864866691885	2	561.3504028320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TEVKKIYKL_	ENSG00000144034|ENST00000272424|TPRKB;nc|ENSG00000144034|Q9Y3C4-2|TPRKB;nc|ENSG00000144034|Q9Y3C4-3|TPRKB	155.5846463517096	0.005567437401040498	4				NaN	NaN	0	NaN	5140	2848	7987
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7991	23.263	NaN	15485	30	0	2532.7	0.106	+			2178	ALMGYATHK	9	78	496.2552874982413	990.4960220632826	2	496.2548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ALMGYATHK_	ENSG00000126709|ENST00000361157|IFI6;nc|ENSG00000126709|P09912-2|IFI6;nc|ENSG00000126709|P09912-3|IFI6	157.32903759742106	0.0051608477690748295	4				NaN	NaN	0	NaN	5141	2848	7987
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7992	23.265	NaN	10425	30	0	1452.7	0.106	+			13641	GMMIQGHTTI	10	72	544.7645662423971	1087.5145795515941	2	544.7647705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GMMIQGHTTI_	ENST00000504445.1_1_4:47514609-47514774:+|nuORF	99.37495909608758	0.07955302164878343	4				NaN	NaN	0	NaN	5142	2848	7987
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7993	23.267	NaN	3025.3	30	0	165.86	0.106	+			18766	ITNFALFCL	9	82	347.8514099121094	NaN	0	347.8514099121094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ITNFALFCL_	ENST00000543796.5_2_12:131361250-131361346:+|nuORF	30.317721548370564	0.32449924987115025	4				NaN	NaN	0	NaN	5143	2848	7987
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	7994	23.269	NaN	10234	30	0	2364.2	0.038				-1	LDSNSGWHQAG	11	61	607.2660582588778	1212.5175635845555	2	607.2661743164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LDSNSGWHQAG_	ENST00000560852.1_1_14:24630531-24632747:+|nuORF;ENST00000561412.1_1_14:24630531-24631537:+|nuORF	31.634271133179894	0.6579734920221648	4				NaN	NaN	0	NaN	5144	2848	7987
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8012	23.305	NaN	3212.7	30	0	361.62	0.214	+			41149	SVKAIREGD	9	73	325.51378734785334	973.51953264376	3	325.51385498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVKAIREGD_	ENSG00000159495|ENST00000452443|TGM7	27.882242232435846	0.5426732730940306	4				NaN	NaN	0	NaN	5159	2851	8011
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8013	23.309	NaN	7558.1	30	0	1104.5	0.106			+	28917	NQVPVANVLPQ	11	66	589.8303218886821	1177.646090844164	2	589.8306274414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NQVPVANVLPQ_	REV__ENSG00000103479|ENST00000262133|RBL2;REV__ENST00000562837.1_1_16:53500972-53504120:+|nuORF	39.252832667884924	0.5681665794958463	4				NaN	NaN	0	NaN	5160	2851	8011
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8014	23.311	NaN	3094.3	30	0	510.88	0.106				-1	 	0	69	384.77192393383325	767.5292949344665	2	384.77197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5161	2851	8011
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8015	23.313	NaN	7533	30	0	1566.9	0.106	+			8169	EAAMQTQASLN	11	82	582.2708838975899	1162.5272148619797	2	582.2705688476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EAAMQTQASLN_	sp|P16785|LTP_HCMVALargetegumentproteindeneddylaseOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL48PE=1SV=1;sp|Q6SW84|LTP_HCMVMLargetegumentproteindeneddylaseOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL48PE=3SV=1	63.69406221917213	0.2904805327065929	4				NaN	NaN	0	NaN	5162	2851	8011
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8016	23.315	NaN	2277.8	30	0	252.67	0.106			+	1133	AELVGKKTK	9	50	487.30526416535446	972.5959753975089	2	487.7666931152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AELVGKKTK_	REV__ENSG00000178974|ENST00000313833|FBXO34;REV__FBXO34|p.L485Cfs*13|1|0.39|ENSG00000178974|chr14:55351837-55351837|T/-|frameshift_variant	20.94693142431847	0.6074874384046576	4				NaN	NaN	0	NaN	5163	2851	8011
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8017	23.316	NaN	10147	30	0	1952.4	0.04				-1	KTMCKNMSDMQ	11	63	674.7720336914062	NaN	0	674.7720336914062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Oxidation (M)	_KTMCKNM(Oxidation (M))SDM(Oxidation (M))Q_	CCDC73|p.R1066Efs*13|1|0.08|ENSG00000186714|chr11:32602859-32602859|C/-|frameshift_variant;CCDC73|p.T895Lfs*8|1|0.13|ENSG00000186714|chr11:32613635-32613635|T/-|frameshift_variant;ENSG00000186714|ENST00000335185|CCDC73	15.333111300571575	0.456735970842152	4				NaN	NaN	0	NaN	5164	2851	8011
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8018	23.317	NaN	9648.8	30	0	2311.5	0.145	+			44678	TTHQVYVLK	9	109	363.54148172410714	1087.6026157725214	3	363.5414733886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TTHQVYVLK_	ENSG00000175215|ENST00000398073|CTDSP2	72.87924865735499	0.12833875048249987	4				NaN	NaN	0	NaN	5165	2851	8011
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8036	23.354	NaN	52252	30	0	6870.7	0.215	+			44863	TTVDIFHKK	9	89	544.8087892774297	1087.6030256216593	2	544.80908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTVDIFHKK_	ENSG00000158411|ENST00000289359|MITD1	155.5846463517096	0.005567437401040498	4				NaN	NaN	0	NaN	5180	2854	8035
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8037	23.358	NaN	6286.5	30	0	822.2	0.106				-1	 	0	73	340.1817311141078	678.3489092950156	2	340.18194580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5181	2854	8035
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8038	23.36	NaN	8333.7	30	0	1406.3	0.106			+	-1	KRKRGPSTM	9	77	538.8017119673333	NaN	0	538.8016967773438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_KRKRGPSTM(Oxidation (M))_	REV__ENST00000418390.6_1_1:24078332-24078368:+|nuORF	42.396135135203025	0.2590952873412954	4				NaN	NaN	0	NaN	5182	2854	8035
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8039	23.362	NaN	6564.5	30	0	1123.1	0.106			+	30273	PTFKVKVSKK	10	76	581.3721904215971	1160.7298279099941	2	581.3721923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PTFKVKVSKK_	REV__ENSG00000075568|ENST00000186436|TMEM131;REV__TMEM131|p.E934K|1|0.09|ENSG00000075568|chr2:97797435-97797435|C/T|missense_variant;REV__TMEM131|p.L1469Tfs*5|1|0.43|ENSG00000075568|chr2:97772340-97772341|-/T|frameshift_variant	60.69067153575145	0.3595586438680871	4				NaN	NaN	0	NaN	5183	2854	8035
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8040	23.364	NaN	3517.8	30	0	402.19	0.106	+			26098	LSNKASKKI	9	69	494.81064547066046	987.6067380081209	2	494.8055419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSNKASKKI_	ENSG00000174718|ENST00000312561|RESF1	25.57405402267927	0.5642445186134241	4				NaN	NaN	0	NaN	5184	2854	8035
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8041	23.366	NaN	8851.4	30	0	1458.1	0.038	+			42944	TEIRSQQQQL	10	68	615.8261108398438	NaN	0	615.8261108398438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TEIRSQQQQL_	ENSG00000138750|ENST00000264883|NUP54;nc|ENSG00000138750|Q7Z3B4-2|NUP54;nc|ENSG00000138750|Q7Z3B4-3|NUP54	59.93077597824379	0.23484348948204886	4				NaN	NaN	0	NaN	5185	2854	8035
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8042	23.366	NaN	3980.1	30	0	302.99	0.146	+			34563	RVLGKSGIPLK	11	79	389.92389624231134	1166.7498593271341	3	389.9240417480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RVLGKSGIPLK_	ENST00000382247.5_1_4:17805583-17805688:-|nuORF	40.015381236134715	0.5577325868682684	4				NaN	NaN	0	NaN	5186	2854	8035
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8060	23.405	NaN	4094.7	30	0	580.59	0.214			+	31507	QLETVKSQI	9	78	523.2987265842684	1044.5829002353366	2	523.2984008789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QLETVKSQI_	REV__ENSG00000052344|ENST00000317508|PRSS8;REV__nc|ENSG00000052344|Q16651-2|PRSS8;REV__PRSS8|p.Q295Kfs*27|1|0.32|ENSG00000052344|chr16:31132158-31132158|G/-|frameshift_variant	88.17693792209575	0.07000514020414955	4				NaN	NaN	0	NaN	5201	2857	8059
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8061	23.409	NaN	8072.6	30	0	940.58	0.106	+			39907	STLTYRMTK	9	78	550.7923445495663	1099.5701361659326	2	550.7925415039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STLTYRMTK_	ENST00000446662.5_1_16:22466144-22470768:+|nuORF;ENST00000522841.6_1_16:21490806-21495758:-|nuORF	91.26522074875469	0.06129826844580791	4				NaN	NaN	0	NaN	5202	2857	8059
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8062	23.411	NaN	10104	30	0	2249	0.106				-1	TSVSVPMLSGM	11	65	562.7717667316547	1123.5289805301093	2	562.7713623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_TSVSVPMLSGM(Oxidation (M))_	ENSG00000135744|ENST00000366667|AGT	31.529811441608018	0.6590691889962369	4				NaN	NaN	0	NaN	5203	2857	8059
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8063	23.413	NaN	5505.9	30	0	784.41	0.106				-1	 	0	84	336.5340575921047	1006.5803433765142	3	336.5342712402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5204	2857	8059
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8064	23.415	NaN	5029.7	30	0	1095.5	0.106			+	30097	PREPAKSVLP	10	62	365.2168525700015	1092.6287283102045	3	365.2169494628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PREPAKSVLP_	REV__ENST00000426198.5_1_7:43965737-43965914:-|nuORF	28.081489160057373	0.6505064946289502	4				NaN	NaN	0	NaN	5205	2857	8059
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8065	23.417	NaN	5168.3	30	0	754.78	0.035	+			14721	GTINIVHPK	9	72	489.78953909176744	977.5645252503349	2	489.7898864746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTINIVHPK_	ENSG00000135069|ENST00000376588|PSAT1;nc|ENSG00000135069|Q9Y617-2|PSAT1	78.26377905018397	0.10505600812668463	4				NaN	NaN	0	NaN	5206	2857	8059
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8066	23.417	NaN	3138	30	0	593.11	0.141	+			24855	LKEAELKMGS	10	56	553.2991943359375	NaN	0	553.2991943359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LKEAELKMGS_	ENSG00000085982|ENST00000678225|USP40;nc|ENSG00000085982|Q9NVE5-3|USP40;nc|ENSG00000085982|Q9NVE5|USP40;USP40|p.F846Lfs*16|1|0.24|ENSG00000085982|chr2:233510121-233510121|A/-|frameshift_variant;USP40|p.N976Hfs*17|1|0.07|ENSG00000085982|chr2:233491251-233491252|-/TGATATGG|frameshift_variant	24.519189625965996	0.41966695327750003	4				NaN	NaN	0	NaN	5207	2857	8059
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8084	23.455	NaN	36906	30	0	6198.5	0.215	+			15167	GTSGLILKR	9	88	472.79817102585963	943.5817891185193	2	472.7978210449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTSGLILKR_	ENSG00000137825|ENST00000260386|ITPKA;ITPKA|p.K290Vfs*10|1|0.3|ENSG00000137825|chr15:41502054-41502055|-/ATGT|frameshift_variant;ITPKA|p.S212L|1|0.18|ENSG00000137825|chr15:41501683-41501683|C/T|missense_variant	120.8684288430529	0.02067403653475984	4				NaN	NaN	0	NaN	5222	2860	8083
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8085	23.459	NaN	32855	30	0	7143.3	0.106	+			36978	SIMSSHVMK	9	80	510.2541775226226	1018.4938021120453	2	510.254150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SIMSSHVMK_	ENSG00000159140|ENST00000356577|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-4|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-6|SON;nc|ENSG00000159140|P18583-7|SON;nc|ENSG00000159140|P18583-9|SON	134.7655990226056	0.012935733000282069	4				NaN	NaN	0	NaN	5223	2860	8083
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8086	23.461	NaN	6222.9	30	0	3535	0.106			+	25875	LSFSITNPLGN	11	64	388.20806288836394	1161.6023592652919	3	388.20819091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSFSITNPLGN_	REV__ENSG00000143344|ENST00000360851|RGL1;REV__nc|ENSG00000143344|Q9NZL6-2|RGL1;REV__RGL1|p.K583Sfs*25|1|0.84|ENSG00000143344|chr1:183912261-183912261|A/-|frameshift_variant;REV__RGL1|p.L272Ffs*55|1|0.05|ENSG00000143344|chr1:183884802-183884803|-/CATATGGCAAA|frameshift_variant	29.550750289552195	0.6798279264880025	4				NaN	NaN	0	NaN	5224	2860	8083
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8087	23.463	NaN	4450.3	30	0	709.09	0.106	+			12828	GENGAGKSTML	11	72	532.7559706044157	1063.4973882756312	2	532.7564086914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GENGAGKSTML_	ENSG00000161204|ENST00000429586|ABCF3;ENST00000468892.5_1_3:183907488-183910505:+|nuORF;ENST00000473311.5_1_3:183906074-183911483:+|nuORF;nc|ENSG00000161204|Q9NUQ8-2|ABCF3	102.0615471778698	0.05642515548841253	4				NaN	NaN	0	NaN	5225	2860	8083
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8088	23.465	NaN	5445.7	30	0	984.92	0.106	+			13759	GQFEQHFQH	9	69	579.2595316623514	1156.5045103915027	2	579.2594604492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GQFEQHFQH_	ENSG00000119812|ENST00000238823|FAM98A;ENST00000474985.5_1_2:33809845-33813599:-|nuORF	90.60085204095205	0.06317133949006545	4				NaN	NaN	0	NaN	5226	2860	8083
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8089	23.466	NaN	5818.6	30	0	859.93	0.036	+			28794	NPHEVQPSY	9	63	535.7488262978313	1069.4830996624626	2	535.7490844726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NPHEVQPSY_	EGLN3|p.A203T|1|0.27|ENSG00000129521|chr14:33929083-33929083|C/T|missense_variant;ENSG00000129521|ENST00000250457|EGLN3	41.42661286455405	0.403525789677298	4				NaN	NaN	0	NaN	5227	2860	8083
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8090	23.467	NaN	5348.2	30	0	1400.1	0.142			+	-1	IFCMEEQFV	9	70	581.2491455078125	NaN	0	581.2491455078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_IFCM(Oxidation (M))EEQFV_	REV__ENST00000220751.4_1_8:90802644-90802779:+|nuORF	37.15910966729921	0.2899585034171616	4				NaN	NaN	0	NaN	5228	2860	8083
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8108	23.506	NaN	16541	30	0	1732.7	0.213	+			38759	SSLSAEAIRQR	11	82	609.3324539554942	1216.6503549777883	2	609.333740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSLSAEAIRQR_	ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1	83.6470233535746	0.12478191950840195	4				NaN	NaN	0	NaN	5243	2863	8107
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8109	23.51	NaN	6792.4	30	0	2233.9	0.106				-1	 	0	54	410.200531062768	818.386509192336	2	410.2005310058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5244	2863	8107
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8110	23.512	NaN	9833.8	30	0	950.83	0.106			+	26657	LVETKKIET	9	75	530.816106769171	1059.617660605142	2	530.8162231445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LVETKKIET_	REV__ENSG00000175792|ENST00000322623|RUVBL1;REV__nc|ENSG00000175792|Q9Y265-2|RUVBL1	87.75429964447693	0.0711966946989736	4				NaN	NaN	0	NaN	5245	2863	8107
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8111	23.514	NaN	5250.5	30	0	736.14	0.106	+			32958	REDLVEKN	8	74	501.76438707534186	NaN	0	501.7644958496094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_REDLVEKN_	ENSG00000078674|ENST00000325083|PCM1;nc|ENSG00000078674|Q15154-2|PCM1;nc|ENSG00000078674|Q15154-3|PCM1;nc|ENSG00000078674|Q15154-4|PCM1;nc|ENSG00000078674|Q15154-5|PCM1;PCM1|p.I260Sfs*14|1|0.44|ENSG00000078674|chr8:17939850-17939850|A/-|frameshift_variant;PCM1|p.K787Nfs*31|2|0.32|ENSG00000078674|chr8:17962067-17962067|A/-|frameshift_variant;PCM1|p.N1992Tfs*15|1|0.25|ENSG00000078674|chr8:18025580-18025580|A/-|frameshift_variant	58.78195531508484	1.7418937515398478	4				NaN	NaN	0	NaN	5246	2863	8107
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8112	23.516	NaN	12685	30	0	1742.8	0.106	+			50938	YHAVVLLDERS	11	76	651.3440551757812	NaN	0	651.3440551757812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YHAVVLLDERS_	ENSG00000120129|ENST00000239223|DUSP1	44.377184641726394	0.3557038908013712	4				NaN	NaN	0	NaN	5247	2863	8107
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8113	23.517	NaN	12232	30	0	1564.7	0.04	+			10030	ERWKMKNSHK	10	78	672.3518676757812	NaN	0	672.3518676757812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ERWKMKNSHK_	ENST00000425011.1_3_X:102840593-102841700:+|nuORF;ENST00000494801.5_1_X:102840495-102841700:+|nuORF	49.536043120802724	0.30853568297719935	4				NaN	NaN	0	NaN	5248	2863	8107
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8114	23.518	NaN	6073	30	0	1677.1	0.143			+	8738	EEFINQIEI	9	75	567.7875343647548	NaN	0	567.785888671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EEFINQIEI_	REV__ENSG00000166170|ENST00000299204|BAG5;REV__nc|ENSG00000166170|Q9UL15-2|BAG5	47.657333605630114	0.2228375344433429	4				NaN	NaN	0	NaN	5249	2863	8107
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8132	23.555	NaN	8975.1	30	0	1290.2	0.215	+			41385	SVMKSFIKR	9	74	548.3215900337256	1094.628627134251	2	548.3218994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVMKSFIKR_	ENSG00000149503|ENST00000394818|INCENP;ENST00000528375.1_1_11:61905314-61909007:+|nuORF;nc|ENSG00000149503|Q9NQS7-2|INCENP	66.96192283764107	0.15557981141143568	4				NaN	NaN	0	NaN	5264	2866	8131
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8133	23.559	NaN	11952	30	0	2267.5	0.106	+			49148	VVMENVGQQK	10	75	566.2942160172898	1130.5738791013796	2	566.2948608398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVMENVGQQK_	ENSG00000004700|ENST00000444129|RECQL	141.52041321563706	0.010348713679906373	4				NaN	NaN	0	NaN	5265	2866	8131
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8134	23.561	NaN	6250.2	30	0	690.78	0.106				-1	 	0	62	495.29286713455014	494.28559066795015	1	495.2925109863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5266	2866	8131
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8135	23.563	NaN	3745.9	30	0	788.89	0.106				-1	CPSPRLAT	8	35	451.23199462890625	NaN	0	451.23199462890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_C(Carbamidomethyl (C))PSPRLAT_	ENST00000216962.8_1_20:25278065-25278461:+|nuORF	19.359975847455235	1.7418937515398478	4				NaN	NaN	0	NaN	5267	2866	8131
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8136	23.565	NaN	6517.7	30	0	1026	0.106			+	-1	KCNCTTAEY	9	56	573.7330776495373	NaN	0	573.7326049804688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C)	_KC(Carbamidomethyl (C))NC(Carbamidomethyl (C))TTAEY_	REV__ASH1L|p.K2377Nfs*5|1|0.28|ENSG00000116539|chr1:155354570-155354570|T/-|frameshift_variant;REV__ASH1L|p.S2309Ifs*11|1|0.64|ENSG00000116539|chr1:155357635-155357636|-/T|frameshift_variant;REV__ENSG00000116539|ENST00000392403|ASH1L;REV__nc|ENSG00000116539|Q9NR48|ASH1L	27.882242232435846	0.3367954786602879	4				NaN	NaN	0	NaN	5268	2866	8131
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8137	23.566	NaN	3778.1	30	0	878.91	0.034				-1	KCCYDGAH	8	46	477.1843693156289	952.3541856980578	2	477.1839904785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_KCC(Carbamidomethyl (C))YDGAH_	CON__Q1A7A4	17.364965105453717	0.7956685240855921	4				NaN	NaN	0	NaN	5269	2866	8131
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8138	23.567	NaN	5057.3	30	0	912.81	0.141				-1	QRKKGILCD	9	63	559.311609472099	1116.608666010998	2	559.3117065429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_QRKKGILC(Carbamidomethyl (C))D_	ENSG00000205189|ENST00000455036|ZBTB10;nc|ENSG00000205189|Q96DT7-2|ZBTB10;nc|ENSG00000205189|Q96DT7-3|ZBTB10;nc|ENSG00000205189|Q96DT7-4|ZBTB10	37.15910966729921	0.4535818937225704	4				NaN	NaN	0	NaN	5270	2866	8131
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8156	23.605	NaN	8670.2	30	0	2057.8	0.214			+	32419	QVGVPRFSK	9	74	509.29593581268216	1016.5773186921643	2	509.2955322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QVGVPRFSK_	REV__ENST00000377298.8_1_1:9790409-9790562:-|nuORF	51.52775601994872	0.28504342437107444	4				NaN	NaN	0	NaN	5285	2869	8155
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8157	23.609	NaN	5691.6	30	0	771.59	0.106				-1	EEKSTMAKK	9	65	534.2722094824375	1066.5298660316748	2	534.2725219726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_EEKSTM(Oxidation (M))AKK_	CACNA1S|p.L1163Wfs*3|1|0.12|ENSG00000081248|chr1:201059227-201059227|G/-|frameshift_variant;CACNA1S|p.P1346Qfs*78|1|0.24|ENSG00000081248|chr1:201051060-201051060|G/-|frameshift_variant;ENSG00000081248|ENST00000362061|CACNA1S	41.42661286455405	0.403525789677298	4				NaN	NaN	0	NaN	5286	2869	8155
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8158	23.611	NaN	5213.9	30	0	811.26	0.106	+			31158	QGINLVLLTR	10	68	563.8512942294716	NaN	0	563.8512573242188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QGINLVLLTR_	ENSG00000107521|ENST00000361490|HPS1;nc|ENSG00000289758|Q92902-2|HPS1;nc|ENSG00000289758|Q92902-4|HPS1	47.657333605630114	0.3204131577145918	4				NaN	NaN	0	NaN	5287	2869	8155
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8159	23.613	NaN	4913.6	30	0	1498.8	0.106			+	18474	ISFKDGKK	8	56	461.77156657155786	921.5285802099157	2	461.771240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ISFKDGKK_	REV__tr|U7T232|U7T232_FUSNUMethylenetetrahydrofolatereductaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00452PE=3SV=1	51.33545320467046	0.5859736979383976	4				NaN	NaN	0	NaN	5288	2869	8155
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8160	23.614	NaN	4468	30	0	753.9	0.106			+	4117	ATEDRYVD	8	57	484.71969675735716	967.4248405815143	2	484.7189025878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATEDRYVD_	REV__ENSG00000085377|ENST00000652536|PREP;REV__PREP|p.G459Rfs*58|1|0.25|ENSG00000085377|chr6:105288837-105288838|-/T|frameshift_variant;REV__PREP|p.L670Cfs*20|1|0.16|ENSG00000085377|chr6:105278269-105278269|G/-|frameshift_variant	32.81241826257853	0.7059802730411993	4				NaN	NaN	0	NaN	5289	2869	8155
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8161	23.616	NaN	9792.2	30	0	1416.4	0.036			+	8617	ECSKSTVKN	9	77	526.7548238774206	NaN	0	526.7542724609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_EC(Carbamidomethyl (C))SKSTVKN_	REV__CHRDL1|p.V343Cfs*16|1|0.34|ENSG00000101938|chrX:110681587-110681587|C/-|frameshift_variant;REV__ENSG00000101938|ENST00000372042|CHRDL1;REV__nc|ENSG00000101938|Q9BU40-5|CHRDL1;REV__nc|ENSG00000101938|Q9BU40|CHRDL1	67.49366992349736	0.1173583512313808	4				NaN	NaN	0	NaN	5290	2869	8155
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8162	23.617	NaN	2619.4	30	0	412.38	0.14			+	22831	KVGNEILTK	9	56	501.3030156528483	1000.5914783724966	2	501.3025817871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KVGNEILTK_	REV__tr|U7T2K2|U7T2K2_FUSNUL-aspartateoxidaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00735PE=3SV=1	23.04248740728303	0.5879033540491928	4				NaN	NaN	0	NaN	5291	2869	8155
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8180	23.656	NaN	35421	30	0	2469.3	0.211				-1	 	0	101	791.8417942390331	1581.6690355448661	2	791.8405151367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5306	2872	8179
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8181	23.659	NaN	10382	30	0	4415.1	0.106				-1	 	0	65	384.77192393383325	767.5292949344665	2	384.7720947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5307	2872	8179
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8182	23.662	NaN	10004	30	0	1141.3	0.106	+			44644	TTFTKIVNK	9	76	526.3109788585128	1050.6074047838256	2	526.310791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TTFTKIVNK_	ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1670Tfs*23|1|0.29|ENSG00000174231|chr17:1659487-1659487|C/-|frameshift_variant	153.03582135801034	0.006161527642367307	4				NaN	NaN	0	NaN	5308	2872	8179
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8183	23.663	NaN	5121.5	30	0	800.21	0.106			+	42857	TEGHLLAAR	9	79	323.18191453053885	966.5239141918166	3	323.18212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TEGHLLAAR_	REV__ENSG00000148688|ENST00000371703|RPP30;REV__ENST00000479678.1_1_10:92655618-92660433:+|nuORF;REV__ENST00000480406.6_1_10:92654546-92665092:+|nuORF;REV__nc|ENSG00000148688|P78346-2|RPP30	18.324413293986947	0.6112419832031293	4				NaN	NaN	0	NaN	5309	2872	8179
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8184	23.665	NaN	12817	30	0	1498	0.106	+			38060	SPRSPDTTL	9	68	487.25123605924125	972.4879191852825	2	487.2509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SPRSPDTTL_	ENSG00000205277|ENST00000536621|MUC12;ENSG00000205277|ENST00000536621|MUC12;ENSG00000205277|ENST00000536621|MUC12;nc|ENSG00000205277|Q9UKN1|MUC12;nc|ENSG00000205277|Q9UKN1|MUC12;nc|ENSG00000205277|Q9UKN1|MUC12	101.25262130126117	0.03792372629710479	4				NaN	NaN	0	NaN	5310	2872	8179
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8185	23.667	NaN	9232.2	30	0	1664.9	0.036	+			17618	IEHLIGKKL	9	98	350.89374017916685	1049.6593911377006	3	350.893798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IEHLIGKKL_	DDX47|p.R377H|1|0.32|ENSG00000213782|chr12:12827269-12827269|G/A|missense_variant;ENSG00000213782|ENST00000358007|DDX47;nc|ENSG00000213782|Q9H0S4-2|DDX47	67.49366992349736	0.1516260258713357	4				NaN	NaN	0	NaN	5311	2872	8179
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8186	23.668	NaN	14669	30	0	2495.2	0.141	+			15816	GVYGDVQRVK	10	80	560.8094877125154	1119.6044224918307	2	560.8096313476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GVYGDVQRVK_	ENSG00000011304|ENST00000356948|PTBP1;ENSG00000117569|ENST00000674951|PTBP2;ENST00000586944.5_1_19:807712-810823:+|nuORF;nc|ENSG00000011304|P26599-1|PTBP1;nc|ENSG00000011304|P26599-2|PTBP1;nc|ENSG00000117569|Q9UKA9-2|PTBP2;nc|ENSG00000117569|Q9UKA9-3|PTBP2;nc|ENSG00000117569|Q9UKA9-4|PTBP2;PTBP2|p.N446Ifs*21|1|0.27|ENSG00000117569|chr1:96812873-96812873|A/-|frameshift_variant;PTBP2|p.P452Sfs*10|1|0.17|ENSG00000117569|chr1:96812888-96812889|-/T|frameshift_variant	114.8945686534367	0.03454040281423369	4				NaN	NaN	0	NaN	5312	2872	8179
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8204	23.705	NaN	7801.1	30	0	785.75	0.214			+	33570	RLHRRGTN	8	76	505.2931364048296	NaN	0	505.2930908203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RLHRRGTN_	REV__ENST00000434837.7_1_6:37664674-37664983:-|nuORF	45.9519527083369	1.7418937515398478	4				NaN	NaN	0	NaN	5327	2875	8203
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8205	23.708	NaN	3748	30	0	602.41	0.106			+	-1	LTGMLLMMA	9	62	514.7451386326381	1027.4757243320762	2	515.7355346679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	3 Oxidation (M)	_LTGM(Oxidation (M))LLM(Oxidation (M))M(Oxidation (M))A_	REV__ENSG00000124089|ENST00000243911|MC3R	28.2542754592877	0.5391964248700117	4				NaN	NaN	0	NaN	5328	2875	8203
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8206	23.71	NaN	7499.2	30	0	1153.2	0.106			+	26405	LTEIPTIRK	9	75	535.8321767468163	1069.6498005604326	2	535.8326416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LTEIPTIRK_	REV__ENSG00000064393|ENST00000406875|HIPK2;REV__nc|ENSG00000064393|Q9H2X6-2|HIPK2;REV__nc|ENSG00000064393|Q9H2X6-3|HIPK2	66.42927471994793	0.16001998865088202	4				NaN	NaN	0	NaN	5329	2875	8203
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8207	23.712	NaN	4603.3	30	0	690.3	0.106	+			33017	REHLLSYL	8	61	344.19398196069085	1029.5601164822726	3	344.19415283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_REHLLSYL_	ENSG00000138594|ENST00000308580|TMOD3	17.364965105453717	0.7956685240855921	4				NaN	NaN	0	NaN	5330	2875	8203
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8208	23.714	NaN	12233	30	0	2751.6	0.106			+	-1	VCTIAVLMK	9	85	331.8538155196653	992.539617159196	3	331.85406494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_VCTIAVLM(Oxidation (M))K_	REV__tr|U7SND5|U7SND5_FUSNUNucleosidetransporter/FeoBGTPaseGatedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01804PE=4SV=1	24.519189625965996	0.574102787014149	4				NaN	NaN	0	NaN	5331	2875	8203
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8209	23.716	NaN	5201.3	30	0	670.35	0.036			+	13404	GLFIFEKVR	9	68	554.8307608115182	NaN	0	554.8311767578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GLFIFEKVR_	REV__ENSG00000176200|ENST00000313253|OR4D11;REV__ENSG00000254466|ENST00000530162|OR4D10	33.921630207806714	0.3063038642147651	4				NaN	NaN	0	NaN	5332	2875	8203
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8210	23.716	NaN	3085.8	30	0	253.21	0.14	+			47648	VSCPVGIKK	9	67	465.77592227507506	929.5372916169501	2	465.77532958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VSCPVGIKK_	ENSG00000175806|ENST00000317173|MSRA;nc|ENSG00000175806|Q9UJ68-2|MSRA;nc|ENSG00000175806|Q9UJ68-3|MSRA;nc|ENSG00000175806|Q9UJ68-4|MSRA;nc|ENSG00000175806|Q9UJ68-5|MSRA	34.172542307311794	0.4838870758800184	4				NaN	NaN	0	NaN	5333	2875	8203
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8228	23.756	NaN	17694	30	0	7293.7	0.215	+			40109	STPDAVMGNPK	11	82	558.7717108644141	1115.5288687956281	2	558.7716064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STPDAVMGNPK_	ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF	88.17693792209575	0.10623774136611049	4				NaN	NaN	0	NaN	5348	2878	8227
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8229	23.759	NaN	13390	30	0	3086.5	0.106	+			27439	MLHCLIFQSPS	11	72	638.3148009496241	1274.615048966048	2	638.3145141601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MLHCLIFQSPS_	ENST00000606851.5_1_6:22194461-22194572:+|nuORF	24.519189625965996	0.7326048944360514	4				NaN	NaN	0	NaN	5349	2878	8227
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8230	23.761	NaN	6029.8	30	0	1219.3	0.106	+			37647	SLQPSISQK	9	63	494.2772798179233	986.5400067026466	2	494.2769470214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLQPSISQK_	ENSG00000163961|ENST00000318037|RNF168;RNF168|p.V562G|1|0.28|ENSG00000163961|chr3:196471850-196471850|A/C|missense_variant	53.08895987439943	0.27122541748218487	4				NaN	NaN	0	NaN	5350	2878	8227
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8231	23.763	NaN	3878.3	30	0	428.17	0.106	+			41224	SVLEQTKLK	9	71	523.3166279929636	1044.6187030527271	2	523.3167114257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVLEQTKLK_	ENSG00000170606|ENST00000304858|HSPA4;HSPA4|p.S737Afs*9|1|0.18|ENSG00000170606|chr5:133103911-133103911|A/-|frameshift_variant	70.8162118820467	0.13725933411854815	4				NaN	NaN	0	NaN	5351	2878	8227
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8232	23.765	NaN	4176.5	30	0	1423.8	0.106			+	-1	IDNVMHKK	8	56	500.76672398279237	999.5188950323848	2	500.76629638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_IDNVM(Oxidation (M))HKK_	REV__tr|U7SQQ6|U7SQQ6_FUSNUNodBhomologydomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01754PE=4SV=1	30.503639358989545	0.7238069182250283	4				NaN	NaN	0	NaN	5352	2878	8227
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8233	23.767	NaN	4024.6	30	0	463.2	0.036	+			11867	FTEPQFLPL	9	75	546.2924094458551	1090.5702659585102	2	546.2924194335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FTEPQFLPL_	nc|ENSG00000163357|Q5T197-2|DCST1	58.78195531508484	0.22376836668196862	4				NaN	NaN	0	NaN	5353	2878	8227
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8234	23.767	NaN	2816	30	0	482.91	0.14				-1	YCCHSKCL	8	64	507.2044382760915	1012.394323618983	2	507.75177001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_YCC(Carbamidomethyl (C))HSKCL_	ENST00000452760.2_1_17:20516367-20517318:+|nuORF	28.2542754592877	0.7411748056684583	4				NaN	NaN	0	NaN	5354	2878	8227
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8252	23.806	NaN	42507	30	0	5542.7	0.214	+			3921	ATASLGVIHK	10	90	498.79571143755146	995.5768699419029	2	498.79534912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATASLGVIHK_	ENSG00000173692|ENST00000308696|PSMD1;nc|ENSG00000173692|Q99460-2|PSMD1;PSMD1-NHEJ1|1|fusion;PSMD1|p.K849Rfs*44|1|0.38|ENSG00000173692|chr2:231165258-231165258|A/-|frameshift_variant;PSMD1|p.L603Afs*7|1|0.19|ENSG00000173692|chr2:231085100-231085101|-/T|frameshift_variant	219.56429443429514	3.3274608472685296E-10	4				NaN	NaN	0	NaN	5369	2881	8251
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8253	23.81	NaN	19518	30	0	2196.2	0.106				-1	 	0	96	704.8457492418494	1407.6769455504987	2	704.8447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5370	2881	8251
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8254	23.812	NaN	5655.9	30	0	1048.9	0.106			+	20535	KFKPIAYDSN	10	73	591.8104589439639	1181.6063649547277	2	591.8088989257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KFKPIAYDSN_	REV__ENSG00000068650|ENST00000375645|ATP11A;REV__ENST00000459908.5_1_13:113512247-113512673:+|nuORF	29.550750289552195	0.6385079145554603	4				NaN	NaN	0	NaN	5371	2881	8251
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8255	23.813	NaN	7331.9	30	0	1158.6	0.106	+			15182	GTSITVPQK	9	70	465.7668915087591	929.5192300843182	2	465.7666320800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTSITVPQK_	ENSG00000134851|ENST00000381334|TMEM165;ENST00000508404.5_1_4:56269487-56291616:+|nuORF;nc|ENSG00000134851|Q9HC07-2|TMEM165;TMEM165|p.L309Wfs*10|1|0.25|ENSG00000134851|chr4:55425397-55425397|T/-|frameshift_variant	75.04331003522576	0.118981335847003	4				NaN	NaN	0	NaN	5372	2881	8251
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8256	23.815	NaN	2823.5	30	0	497.26	0.106				-1	PRPPTETPC	9	54	527.7510669692367	1053.4875810052733	2	527.7512817382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_PRPPTETPC(Carbamidomethyl (C))_	ENSG00000136378|ENST00000388820|ADAMTS7	29.14955571784316	0.5308295550522326	4				NaN	NaN	0	NaN	5373	2881	8251
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8257	23.817	NaN	3196.1	30	0	1058.1	0.037			+	28685	NLYYLEEAH	9	46	576.2707031306351	NaN	0	576.2706298828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NLYYLEEAH_	REV__ENSG00000168077|ENST00000301904|SCARA3;REV__nc|ENSG00000168077|Q6AZY7-2|SCARA3	25.57405402267927	0.3484490411150625	4				NaN	NaN	0	NaN	5374	2881	8251
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8258	23.818	NaN	7192.3	30	0	996.26	0.141	+			21851	KRKAVPKSAV	10	74	542.3537543028536	1082.6929556725072	2	542.35302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KRKAVPKSAV_	ENSG00000066422|ENST00000312938|ZBTB11;ZBTB11|p.E974Nfs*14|1|0.1|ENSG00000066422|chr3:101651408-101651408|C/-|frameshift_variant	42.33807565288922	0.5276008846745733	4				NaN	NaN	0	NaN	5375	2881	8251
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8276	23.857	NaN	10611	30	0	2712.7	0.214			+	17196	HTVLSAQYK	9	104	349.52568082224076	1045.5552130669223	3	349.52581787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HTVLSAQYK_	REV__ENSG00000263528|ENST00000581977|IKBKE;REV__nc|ENSG00000263528|Q14164-2|IKBKE	35.61828744233558	0.47037581924408073	4				NaN	NaN	0	NaN	5390	2884	8275
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8277	23.861	NaN	9424.7	30	0	727.69	0.106	+			40256	STSKIVSSFK	10	72	542.3061621677075	1082.597771402215	2	542.3063354492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STSKIVSSFK_	ENSG00000047056|ENST00000263150|WDR37;nc|ENSG00000047056|Q9Y2I8-2|WDR37;nc|ENSG00000047056|Q9Y2I8-3|WDR37	112.2953585152457	0.0411829880542106	4				NaN	NaN	0	NaN	5391	2884	8275
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8278	23.863	NaN	10018	30	0	2901.4	0.106	+			20154	KEKQLFKK	8	76	524.8296376659896	1047.644722398779	2	524.8297729492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEKQLFKK_	ENSG00000153012|ENST00000382114|LGI2	96.19043198914106	0.25873003980794995	4				NaN	NaN	0	NaN	5392	2884	8275
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8279	23.864	NaN	8384.9	30	0	1770.6	0.106	+			51557	YYEHVKARF	9	65	404.87659197405947	1211.6079465223784	3	404.8767395019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YYEHVKARF_	ENSG00000115648|ENST00000264605|MLPH;ENST00000468178.5_1_2:238402069-238454213:+|nuORF;ENST00000469619.5_1_2:238402069-238419788:+|nuORF;nc|ENSG00000115648|Q9BV36-2|MLPH;nc|ENSG00000115648|Q9BV36-3|MLPH;nc|ENSG00000115648|Q9BV36-4|MLPH;nc|ENSG00000115648|Q9BV36-5|MLPH	44.377184641726394	0.36891676396732553	4				NaN	NaN	0	NaN	5393	2884	8275
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8280	23.866	NaN	4966.1	30	0	467.04	0.106				-1	 	0	82	336.5340575921047	1006.5803433765142	3	336.5342712402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5394	2884	8275
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8281	23.868	NaN	3676.3	30	0	311.02	0.035	+			45646	TYSKAMAKL	9	64	506.7783779826206	NaN	0	506.77825927734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TYSKAMAKL_	ENSG00000130475|ENST00000596536|FCHO1;ENST00000601247.5_1_19:17858586-17877404:+|nuORF;nc|ENSG00000130475|O14526-2|FCHO1	71.87747018426188	0.0992163553043454	4				NaN	NaN	0	NaN	5395	2884	8275
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8282	23.869	NaN	5578.1	30	0	859.81	0.144	+			32353	QTYSTEPNNLK	11	63	647.8181055189264	1293.6216581046526	2	647.81787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QTYSTEPNNLK_	ENSG00000108107|ENST00000344063|RPL28;nc|ENSG00000108107|P46779-2|RPL28;nc|ENSG00000108107|P46779-3|RPL28;nc|ENSG00000108107|P46779-4|RPL28;nc|ENSG00000108107|P46779-5|RPL28	48.601550744091256	0.44024757269956427	4				NaN	NaN	0	NaN	5396	2884	8275
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8300	23.908	NaN	15260	30	0	3364.9	0.214			+	25656	LRADSPAVD	9	71	472.2460206253223	942.4774883174446	2	472.24554443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LRADSPAVD_	REV__ENST00000588552.5_1_19:5286204-5340720:-|nuORF	76.7741389293348	0.11149722112137898	4				NaN	NaN	0	NaN	5411	2887	8299
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8301	23.912	NaN	12743	30	0	2161.3	0.106	+			15400	GTYGLDSVKK	10	63	534.2904979253166	1066.566442917433	2	534.2904052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTYGLDSVKK_	ENSG00000087338|ENST00000282570|GMCL1	93.5975768576971	0.11047702954938905	4				NaN	NaN	0	NaN	5412	2887	8299
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8302	23.914	NaN	10130	30	0	2951	0.106				-1	 	0	68	557.8274733958436	1113.6403938584872	2	557.8272705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5413	2887	8299
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8303	23.916	NaN	6415.4	30	0	1100.2	0.106	+			28967	NSGARIGLAE	10	70	494.2620167647982	NaN	0	494.2635498046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NSGARIGLAE_	ACACA|p.E2200Gfs*26|1|0.48|ENSG00000278540|chr17:37097953-37097954|-/T|frameshift_variant;ENSG00000278540|ENST00000616317|ACACA;nc|ENSG00000278540|Q13085-2|ACACA;nc|ENSG00000278540|Q13085-3|ACACA;nc|ENSG00000278540|Q13085|ACACA	38.753607047826485	0.3729281687199363	4				NaN	NaN	0	NaN	5414	2887	8299
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8304	23.917	NaN	4640.2	30	0	549.65	0.106				-1	KMLDEMKY	8	67	545.2516929339149	1088.4888329346297	2	545.2522583007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Oxidation (M)	_KM(Oxidation (M))LDEM(Oxidation (M))KY_	ENST00000392357.1_1_17:80014171-80014696:+|nuORF	44.116797842482775	0.6307669463330267	4				NaN	NaN	0	NaN	5415	2887	8299
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8305	23.919	NaN	14841	30	0	4691.4	0.031				-1	 	0	76	362.75885327723506	723.5031536212701	2	362.75897216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5416	2887	8299
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8306	23.92	NaN	8068	30	0	554.36	0.146				-1	RQELCKLMCER	11	75	733.3566880546775	1464.698823176155	2	733.3555297851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_RQELC(Carbamidomethyl (C))KLMCER_	ENSG00000136813|ENST00000684092|ECPAS;ENST00000465499.1_1_9:114128483-114132846:-|nuORF;nc|ENSG00000136813|Q5VYK3|ECPAS	23.52269567125451	0.7430573033454468	4				NaN	NaN	0	NaN	5417	2887	8299
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8324	23.958	NaN	7056.3	30	0	971.89	0.214	+			18694	ITDEFVKQK	9	73	554.3063412382786	1106.5981295433571	2	554.306396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ITDEFVKQK_	ENSG00000067445|ENST00000173898|TRO;ENSG00000102316|ENST00000375068|MAGED2;ENST00000475183.1_1_X:54953428-54957230:+|nuORF;ENST00000492706.5_1_X:54953428-54957450:+|nuORF;nc|ENSG00000067445|Q12816-2|TRO;nc|ENSG00000067445|Q12816-3|TRO;nc|ENSG00000067445|Q12816-4|TRO;nc|ENSG00000067445|Q12816-5|TRO;nc|ENSG00000102316|Q9UNF1-2|MAGED2;TRO|p.S1034Rfs*10|1|0.07|ENSG00000067445|chrX:54929826-54929826|C/-|frameshift_variant	171.53180478179638	0.0025054460641941692	4				NaN	NaN	0	NaN	5432	2890	8323
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8325	23.961	NaN	3557.5	30	0	295.63	0.106	+			17470	ICMVCCRE	8	59	507.2044382760915	1012.394323618983	2	507.2041320800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_ICMVC(Carbamidomethyl (C))CRE_	ENSG00000072121|ENST00000347230|ZFYVE26;ENST00000554523.5_1_14:68228796-68282710:-|nuORF;nc|ENSG00000072121|Q68DK2-2|ZFYVE26;nc|ENSG00000072121|Q68DK2-5|ZFYVE26;ZFYVE26|p.D2439Efs*31|1|0.04|ENSG00000072121|chr14:67752398-67752399|-/T|frameshift_variant;ZFYVE26|p.D2513Mfs*3|1|0.29|ENSG00000072121|chr14:67748519-67748519|C/-|frameshift_variant	42.47446043378293	0.6409579893742323	4				NaN	NaN	0	NaN	5433	2890	8323
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8326	23.963	NaN	3253.9	30	0	414.77	0.106			+	25797	LSATQSLHGL	10	58	513.7842868661309	NaN	0	513.7532958984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSATQSLHGL_	REV__ENSG00000112685|ENST00000230449|EXOC2	36.446750945000026	0.3805027428805705	4				NaN	NaN	0	NaN	5434	2890	8323
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8327	23.965	NaN	4074	30	0	877.08	0.106	+			9157	EGNRVCGAGYG	11	57	541.7402539807321	NaN	0	541.7402954101562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EGNRVCGAGYG_	ENSG00000170927|ENST00000371117|PKHD1;nc|ENSG00000170927|P08F94-2|PKHD1;PKHD1|p.H2893Pfs*2|1|0.4|ENSG00000170927|chr6:51754903-51754904|-/G|frameshift_variant	29.14955571784316	0.43550879202308607	4				NaN	NaN	0	NaN	5435	2890	8323
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8328	23.967	NaN	7415.5	30	0	1640.9	0.106				-1	VSNDMCTQVAK	11	58	634.784340135712	1267.554127338224	2	634.7839965820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C),Oxidation (M)	_VSNDM(Oxidation (M))C(Carbamidomethyl (C))TQVAK_	ADAMTSL1|p.R1713Gfs*28|1|0.2|ENSG00000178031|chr9:18906864-18906864|C/-|frameshift_variant;ENSG00000178031|ENST00000380548|ADAMTSL1;ENST00000380559.7_1_9:18706652-18908543:+|nuORF;nc|ENSG00000178031|Q8N6G6-6|ADAMTSL1	35.15202426646627	0.6210751305041943	4				NaN	NaN	0	NaN	5436	2890	8323
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8329	23.969	NaN	7653.5	30	0	1179.8	0.037	+			43962	TPEEKIREY	9	70	582.7990155657926	1163.5834781983851	2	582.798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TPEEKIREY_	ENSG00000138668|ENST00000313899|HNRNPD;ENST00000514325.1_1_4:83279715-83279970:-|nuORF;nc|ENSG00000138668|Q14103-2|HNRNPD;nc|ENSG00000138668|Q14103-3|HNRNPD;nc|ENSG00000138668|Q14103-4|HNRNPD	76.16968421966216	0.11411088698345859	4				NaN	NaN	0	NaN	5437	2890	8323
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8347	24.005	NaN	4137.4	30	0	1224	0.214				-1	 	0	68	384.77192393383325	767.5292949344665	2	384.7720947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5452	2893	8346
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8348	24.008	NaN	24121	30	0	2948.9	0.106				-1	 	0	98	680.8660143344512	1359.7174757357022	2	681.3663330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5453	2893	8346
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8349	24.011	NaN	3664.1	30	0	898.21	0.106			+	51055	YLIKWLPQ	8	48	530.8131653385325	1059.6117777438649	2	530.8134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YLIKWLPQ_	REV__ENST00000577191.5_1_17:7125289-7125622:+|nuORF	19.359975847455235	0.7988239741663654	4				NaN	NaN	0	NaN	5454	2893	8346
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8350	24.012	NaN	4088.5	30	0	623.04	0.106	+			43088	TENLTKEHL	9	69	542.7860495435023	NaN	0	542.7861938476562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TENLTKEHL_	ENSG00000096696|ENST00000379802|DSP	66.42927471994793	0.121898005645852	4				NaN	NaN	0	NaN	5455	2893	8346
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8351	24.014	NaN	3161.6	30	0	502.1	0.106	+			16754	HLSASVNSY	9	52	489.2382717156355	976.461990498071	2	489.238037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HLSASVNSY_	nc|ENSG00000137747|Q9BYE2-4|TMPRSS13	42.396135135203025	0.392153681582562	4				NaN	NaN	0	NaN	5456	2893	8346
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8352	24.016	NaN	6119.9	30	0	757.44	0.038				-1	EMVVCSSESIT	11	76	621.2739995944546	NaN	0	621.2740478515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_EMVVC(Carbamidomethyl (C))SSESIT_	ENSG00000066933|ENST00000356056|MYO9A;ENST00000563542.5_1_15:72185266-72338904:-|nuORF;MYO9A|p.L1961*|2|0.14|ENSG00000066933|chr15:71878089-71878089|A/-|frameshift_variant;MYO9A|p.Y1422Ifs*8|1|0.18|ENSG00000066933|chr15:71898239-71898239|A/-|frameshift_variant;nc|ENSG00000066933|B2RTY4-2|MYO9A;nc|ENSG00000066933|B2RTY4-4|MYO9A;nc|ENSG00000066933|B2RTY4-5|MYO9A	39.252832667884924	0.39048276625972167	4				NaN	NaN	0	NaN	5457	2893	8346
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8353	24.017	NaN	4204.5	30	0	534.97	0.142	+			38925	SSQGFMHMK	9	72	526.736705164021	NaN	0	526.8042602539062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSQGFMHMK_	ENSG00000138606|ENST00000690270|SHF;nc|ENSG00000138606|Q7M4L6-2|SHF;nc|ENSG00000138606|Q7M4L6|SHF	45.97224482568171	0.23445038899310136	4				NaN	NaN	0	NaN	5458	2893	8346
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8371	24.055	NaN	8082.7	30	0	1106.2	0.215	+			29434	PCGASQSMTLK	11	75	561.768100541112	1121.5216481490238	2	561.7681884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PCGASQSMTLK_	ENST00000601799.5_1_19:57742659-57743507:+|nuORF	47.95952297671804	0.44903247279694136	4				NaN	NaN	0	NaN	5473	2896	8370
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8372	24.059	NaN	2847	30	0	526.36	0.106	+			31667	QNGMSTLSSQ	10	62	526.736705164021	NaN	0	526.7366333007812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QNGMSTLSSQ_	ENSG00000128573|ENST00000350908|FOXP2;ENST00000459666.5_1_7:114066566-114268765:+|nuORF;nc|ENSG00000128573|O15409-4|FOXP2;nc|ENSG00000128573|O15409-5|FOXP2;nc|ENSG00000128573|O15409-6|FOXP2;nc|ENSG00000128573|O15409-7|FOXP2;nc|ENSG00000128573|O15409-8|FOXP2;nc|ENSG00000128573|O15409-9|FOXP2	41.42661286455405	0.3598046802465243	4				NaN	NaN	0	NaN	5474	2896	8370
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8373	24.061	NaN	2391.4	30	0	228.3	0.106	+			15793	GVVGGEIQEK	10	60	508.2750244140625	NaN	0	508.2750244140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GVVGGEIQEK_	ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1	33.921630207806714	0.38879399011744475	4				NaN	NaN	0	NaN	5475	2896	8370
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8374	24.063	NaN	4596.7	30	0	922.62	0.106			+	50581	YCRGEFWW	8	51	573.7462446216399	NaN	0	573.7462768554688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YCRGEFWW_	REV__ENSG00000137261|ENST00000378214|KIAA0319;REV__KIAA0319|p.S314Lfs*19|1|0.17|ENSG00000137261|chr6:24588648-24588648|G/-|frameshift_variant;REV__nc|ENSG00000137261|Q5VV43-2|KIAA0319;REV__nc|ENSG00000137261|Q5VV43-3|KIAA0319;REV__nc|ENSG00000137261|Q5VV43-4|KIAA0319	26.79610172149135	1.7418937515398478	4				NaN	NaN	0	NaN	5476	2896	8370
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8375	24.065	NaN	3359	30	0	299.89	0.106	+			3625	ASVVAIDNK	9	63	458.7587269282279	915.5029009232558	2	458.7582092285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASVVAIDNK_	ENSG00000102804|ENST00000458659|TSC22D1;ENSG00000157514|ENST00000372383|TSC22D3;ENST00000487881.2_1_13:45010128-45010713:-|nuORF;nc|ENSG00000102804|Q15714-2|TSC22D1;nc|ENSG00000102804|Q15714-3|TSC22D1;nc|ENSG00000157514|Q99576|TSC22D3	98.58198989935565	0.04066992115528678	4				NaN	NaN	0	NaN	5477	2896	8370
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8376	24.066	NaN	2162.5	30	0	244.09	0.034	+			29886	PLLHRALH	8	58	478.792738599138	955.570924265076	2	478.7924499511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PLLHRALH_	ENSG00000257365|ENST00000246166|FNTB;nc|ENSG00000257365|P49356-2|FNTB	69.09296820870183	0.4144562040832486	4				NaN	NaN	0	NaN	5478	2896	8370
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8377	24.067	NaN	7047.2	30	0	770.35	0.145			+	-1	AWQHCLRVSVE	11	65	692.8446044921875	NaN	0	692.8446044921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_AWQHC(Carbamidomethyl (C))LRVSVE_	REV__ENSG00000163701|ENST00000383814|IL17RE;REV__ENST00000383815.7_1_3:9944714-9956386:+|nuORF;REV__ENST00000489181.5_1_3:9944520-9950978:+|nuORF;REV__nc|ENSG00000163701|Q8NFR9-2|IL17RE;REV__nc|ENSG00000163701|Q8NFR9-3|IL17RE;REV__nc|ENSG00000163701|Q8NFR9-4|IL17RE;REV__nc|ENSG00000163701|Q8NFR9-5|IL17RE	24.519189625965996	0.45614437233802635	4				NaN	NaN	0	NaN	5479	2896	8370
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8395	24.106	NaN	6816.8	30	0	2370.2	0.214				-1	 	0	79	344.54632137471424	1030.6171347243428	3	344.54638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5494	2899	8394
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8396	24.11	NaN	6435.5	30	0	897.98	0.106	+			30142	PSAFWGRSRDP	11	66	638.3148009496241	1274.615048966048	2	638.3143310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PSAFWGRSRDP_	ENST00000247706.3_1_19:17403215-17403443:-|nuORF	22.579656572578934	0.7529490144093228	4				NaN	NaN	0	NaN	5495	2899	8394
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8397	24.112	NaN	3183.2	30	0	426.23	0.106			+	40607	SVAIKIEGK	9	61	472.79312734025416	943.5717017473083	2	472.7969665527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVAIKIEGK_	REV__ENSG00000048828|ENST00000277165|FAM120A;REV__nc|ENSG00000048828|Q9NZB2-4|FAM120A;REV__nc|ENSG00000048828|Q9NZB2-5|FAM120A;REV__nc|ENSG00000048828|Q9NZB2-6|FAM120A	65.46538089061403	0.16805504838372562	4				NaN	NaN	0	NaN	5496	2899	8394
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8398	24.114	NaN	5858.5	30	0	1676.5	0.106			+	-1	SCLAVLILCT	10	59	575.3052366847111	1148.595920436222	2	575.3053588867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_SC(Carbamidomethyl (C))LAVLILC(Carbamidomethyl (C))T_	REV__ENST00000552459.2_1_12:51634062-51634266:+|nuORF	20.94693142431847	0.7087701759873708	4				NaN	NaN	0	NaN	5497	2899	8394
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8399	24.116	NaN	4091.9	30	0	727.51	0.106			+	20539	KFKYTVVGK	9	65	535.3226802831881	1068.6308076331761	2	535.3223876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KFKYTVVGK_	REV__ENSG00000163217|ENST00000295379|BMP10	42.86426827375447	0.38666266728046506	4				NaN	NaN	0	NaN	5498	2899	8394
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8400	24.117	NaN	7804.7	30	0	1897	0.035	+			15052	GTNSLELQK	9	70	495.2654949607902	NaN	0	495.2657470703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTNSLELQK_	ENSG00000131503|ENST00000360839|ANKHD1;ENST00000462121.1_1_5:139876268-139877642:+|nuORF;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	136.98908636845044	0.00038087405662700757	4				NaN	NaN	0	NaN	5499	2899	8394
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8401	24.118	NaN	3922	30	0	440.39	0.141			+	9702	EMHSKLNVL	9	69	543.7826379079524	1085.5507228827048	2	543.7830810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_EM(Oxidation (M))HSKLNVL_	REV__ENST00000566201.6_1_16:46508202-46534771:-|nuORF	71.87747018426188	0.13267044672804276	4				NaN	NaN	0	NaN	5500	2899	8394
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8419	24.156	NaN	7162.5	30	0	809.02	0.214	+			20273	KENLRPMI	8	77	500.78409613843326	999.5536393436665	2	500.7837829589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KENLRPMI_	ENSG00000107099|ENST00000432829|DOCK8;nc|ENSG00000107099|Q8NF50-2|DOCK8;nc|ENSG00000107099|Q8NF50-3|DOCK8;nc|ENSG00000107099|Q8NF50-4|DOCK8	58.78195531508484	0.5138399468736706	4				NaN	NaN	0	NaN	5515	2902	8418
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8420	24.16	NaN	4712.8	30	0	2469.2	0.106			+	46510	VEVEVEVVV	9	64	334.191543388118	999.5528007645541	3	334.1917724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VEVEVEVVV_	REV__FUS|p.P152Lfs*33|1|0.31|ENSG00000089280|chr16:31184324-31184324|C/-|frameshift_variant	33.51558372728122	0.4900267029546261	4				NaN	NaN	0	NaN	5516	2902	8418
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8421	24.162	NaN	11152	30	0	2392.2	0.106	+			43166	TETHVERVL	9	85	361.8643729840631	1082.5712895523893	3	361.86456298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TETHVERVL_	ENSG00000076201|ENST00000265562|PTPN23;PTPN23|p.L1513Wfs*71|1|0.44|ENSG00000076201|chr3:47412805-47412805|G/-|frameshift_variant	21.9598887501803	0.5980208138527809	4				NaN	NaN	0	NaN	5517	2902	8418
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8422	24.164	NaN	6913.7	30	0	1421	0.106	+			1122	AELPKKRMR	9	81	376.8926756140209	1127.6561974422627	3	377.2276306152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AELPKKRMR_	ENSG00000039650|ENST00000322344|PNKP;ENST00000593946.5_1_19:50364507-50370327:-|nuORF;ENST00000594661.5_1_19:50367579-50369988:-|nuORF;nc|ENSG00000039650|Q96T60-2|PNKP	30.317721548370564	0.5199124245378496	4				NaN	NaN	0	NaN	5518	2902	8418
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8423	24.166	NaN	3001.5	30	0	446.62	0.106	+			45089	TVIEEHLGK	9	57	513.2845775713645	NaN	0	513.284912109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TVIEEHLGK_	ENSG00000146223|ENST00000493763|RPL7L1;ENST00000397415.7_1_6:42848808-42854199:+|nuORF	32.81241826257853	0.3119040447479903	4				NaN	NaN	0	NaN	5519	2902	8418
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8424	24.168	NaN	8972.4	30	0	1031.1	0.039			+	25640	LQSLFVGKQHK	11	80	642.8759282607169	1283.7373035882338	2	642.8745727539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LQSLFVGKQHK_	REV__ENSG00000186281|ENST00000434632|GPAT2;REV__ENST00000471757.5_1_2:96687909-96690664:-|nuORF;REV__ENST00000482704.1_1_2:96689607-96690664:-|nuORF;REV__ENST00000484440.5_1_2:96688852-96698107:-|nuORF;REV__ENST00000486463.5_1_2:96687909-96693504:-|nuORF	50.79123845855914	0.4102859592092987	4				NaN	NaN	0	NaN	5520	2902	8418
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8425	24.168	NaN	4146.4	30	0	786.69	0.142			+	31012	QESSKFPRI	9	63	546.2981088260594	1090.5816647189188	2	546.3012084960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QESSKFPRI_	REV__ENSG00000270765|ENST00000604641|GAS2L2;REV__GAS2L2|p.R197Gfs*18|1|0.67|ENSG00000270765|chr17:35750116-35750116|G/-|frameshift_variant;REV__GAS2L2|p.V296Gfs*13|1|0.03|ENSG00000270765|chr17:35747211-35747214|CTTA/-|frameshift_variant;REV__nc|ENSG00000270765|Q8NHY3-2|GAS2L2	42.396135135203025	0.392153681582562	4				NaN	NaN	0	NaN	5521	2902	8418
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8443	24.207	NaN	8475.8	30	0	2942.4	0.214				-1	 	0	63	341.16083501595836	680.3071170987167	2	341.1609802246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5536	2905	8442
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8444	24.21	NaN	6648.4	30	0	825.39	0.106	+			41892	SVTSPIKMK	9	71	495.7862396517516	989.5579263703032	2	495.7861633300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVTSPIKMK_	ENSG00000082258|ENST00000264157|CCNT2;nc|ENSG00000082258|O60583-2|CCNT2	54.776311868738084	0.25715957988447635	4				NaN	NaN	0	NaN	5537	2905	8442
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8445	24.212	NaN	6299.5	30	0	759.28	0.106	+			22923	KVPQVSTPT	9	56	478.7741204913473	955.5336880494946	2	478.7738342285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KVPQVSTPT_	ALB|p.V457Wfs*25|1|0.2|ENSG00000163631|chr4:73417606-73417606|A/-|frameshift_variant;CON__P02768-1;CON__P02769;ENSG00000163631|ENST00000295897|ALB;nc|ENSG00000163631|P02768-2|ALB;nc|ENSG00000163631|P02768-3|ALB	67.49366992349736	0.1516260258713357	4				NaN	NaN	0	NaN	5538	2905	8442
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8446	24.214	NaN	6763.6	30	0	1652.8	0.106			+	9189	EGQLQQIQK	9	63	536.2928297597875	1070.571106586375	2	536.2926635742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EGQLQQIQK_	REV__CCDC136|p.K1048Sfs*3|1|0.23|ENSG00000128596|chr7:128815705-128815705|A/-|frameshift_variant;REV__ENSG00000128596|ENST00000297788|CCDC136;REV__nc|ENSG00000128596|Q96JN2-2|CCDC136;REV__nc|ENSG00000128596|Q96JN2-3|CCDC136;REV__nc|ENSG00000128596|Q96JN2-4|CCDC136	51.19269402634007	0.2889735674168909	4				NaN	NaN	0	NaN	5539	2905	8442
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8447	24.216	NaN	6760.8	30	0	708.71	0.106	+			1779	AICSSTKLLK	10	68	560.823812522823	NaN	0	560.8238525390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_AIC(Carbamidomethyl (C))SSTKLLK_	ENSG00000173821|ENST00000582970|RNF213;ENST00000559070.5_1_17:78261823-78310301:+|nuORF;nc|ENSG00000173821|Q63HN8-4|RNF213;nc|ENSG00000173821|Q63HN8-5|RNF213;nc|ENSG00000173821|Q63HN8|RNF213;RNF213|p.C5022Lfs*7|1|0.3|ENSG00000173821|chr17:80389237-80389237|G/-|frameshift_variant;RNF213|p.P2167Lfs*64|1|0.09|ENSG00000173821|chr17:80344834-80344835|-/T|frameshift_variant;RNF213|p.Q1953Rfs*50|2|0.13|ENSG00000173821|chr17:80340219-80340219|C/-|frameshift_variant	59.93077597824379	0.23484348948204886	4				NaN	NaN	0	NaN	5540	2905	8442
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8448	24.218	NaN	3543.4	30	0	705.95	0.036			+	16720	HLFLMGKVI	9	64	529.3154296875	NaN	0	529.3154296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HLFLMGKVI_	REV__ENSG00000169418|ENST00000368680|NPR1;REV__NPR1|p.F763Sfs*37|1|0.08|ENSG00000169418|chr1:153688085-153688085|C/-|frameshift_variant	38.80614096846853	0.28164298475537564	4				NaN	NaN	0	NaN	5541	2905	8442
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8449	24.218	NaN	3274	30	0	507.44	0.139			+	23649	LARLTRRG	8	59	471.8023823269038	NaN	0	471.802490234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LARLTRRG_	REV__ENST00000314222.4_1_11:2949785-2950526:-|nuORF	24.519189625965996	1.7418937515398478	4				NaN	NaN	0	NaN	5542	2905	8442
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8467	24.256	NaN	86087	30	0	21675	0.215	+			4554	ATLDVAVRR	9	116	500.79866280177407	999.5827726703482	2	500.79840087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATLDVAVRR_	ENSG00000100429|ENST00000216271|HDAC10;ENST00000415993.5_1_22:50683938-50688578:-|nuORF;ENST00000454936.5_1_22:50684197-50686327:-|nuORF;ENST00000477814.5_1_22:50684197-50686750:-|nuORF;ENST00000496235.5_1_22:50685302-50686327:-|nuORF;ENST00000497036.5_1_22:50684150-50687609:-|nuORF;ENST00000497952.5_1_22:50685106-50686347:-|nuORF;HDAC10|p.G498D|1|0.4|ENSG00000100429|chr22:50246896-50246896|C/T|missense_variant;nc|ENSG00000100429|Q969S8-2|HDAC10;nc|ENSG00000100429|Q969S8-4|HDAC10	150.36159442982594	0.006784847064083231	4				NaN	NaN	0	NaN	5557	2908	8466
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8468	24.259	NaN	9575.3	30	0	3671.3	0.106	+			29614	PGAAGCHL	8	72	363.17389149235066	724.3332300515013	2	363.1739807128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PGAAGCHL_	ENST00000309502.7_1_1:203097442-203098130:+|nuORF	24.504012794735996	0.7701314986472447	4				NaN	NaN	0	NaN	5558	2908	8466
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8469	24.261	NaN	8578.3	30	0	865.2	0.106	+			24077	LEKENKELL	9	67	558.3201803410678	1114.6258077489356	2	558.3201293945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LEKENKELL_	ENSG00000132688|ENST00000368223|NES;NES|p.A1050Pfs*14|1|0.36|ENSG00000132688|chr1:156671040-156671040|C/-|frameshift_variant;NES|p.P1439Qfs*11|1|0.19|ENSG00000132688|chr1:156669874-156669874|C/-|frameshift_variant;NES|p.V1249Cfs*11|1|0.37|ENSG00000132688|chr1:156670443-156670443|C/-|frameshift_variant	96.0336014099291	0.047854655524928534	4				NaN	NaN	0	NaN	5559	2908	8466
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8470	24.263	NaN	27443	30	0	3096.3	0.106	+			5456	ATYSVGMQK	9	81	492.7446270320713	983.4747011309427	2	492.7447814941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATYSVGMQK_	ENSG00000131941|ENST00000254260|RHPN2;ENST00000592247.1_1_19:33470904-33481620:-|nuORF;nc|ENSG00000131941|Q8IUC4-2|RHPN2;nc|ENSG00000258628|A8MT19|RHPN2P1	195.06343300570734	5.420119182691198E-05	4				NaN	NaN	0	NaN	5560	2908	8466
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8471	24.265	NaN	6484.8	30	0	664.6	0.106			+	-1	NCPPCYMQ	8	76	514.6854202999784	1027.3562876667568	2	514.6852416992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C),Oxidation (M)	_NCPPC(Carbamidomethyl (C))YM(Oxidation (M))Q_	REV__ENSG00000050730|ENST00000057513|TNIP3;REV__ENST00000511909.5_1_4:122053805-122071269:-|nuORF;REV__nc|ENSG00000050730|Q96KP6-2|TNIP3;REV__nc|ENSG00000050730|Q96KP6-3|TNIP3;REV__TNIP3|p.G271S|1|0.13|ENSG00000050730|chr4:121141890-121141890|C/T|missense_variant	31.954861631926434	0.7126016770032289	4				NaN	NaN	0	NaN	5561	2908	8466
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8472	24.267	NaN	5933.1	30	0	785.33	0.106	+			33018	REHVEAIKI	9	71	365.54855656651307	1093.6238402997392	3	365.54876708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_REHVEAIKI_	ENSG00000122952|ENST00000373944|ZWINT;nc|ENSG00000122952|O95229-2|ZWINT	66.96192283764107	0.15557981141143568	4				NaN	NaN	0	NaN	5562	2908	8466
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8473	24.269	NaN	6249.9	30	0	738.9	0.038	+			27331	MIARRNPEPL	10	65	598.8322327118285	1195.649912490457	2	599.3341674804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MIARRNPEPL_	ENSG00000151366|ENST00000281031|NDUFC2;nc|ENSG00000151366|O95298-2|NDUFC2;nc|ENSG00000151366|O95298-3|NDUFC2;nc|ENSG00000259112|E9PQ53|NDUFC2-KCTD14	61.691277971877994	0.35045824941635534	4				NaN	NaN	0	NaN	5563	2908	8466
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8491	24.304	NaN	118480	30	0	21800	0.164	+			48855	VVCEYIVKK	9	88	569.3203410820175	1136.626129230835	2	569.3206176757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_VVC(Carbamidomethyl (C))EYIVKK_	EIF2S3|p.I441Nfs*4|1|0.29|ENSG00000130741|chrX:24073223-24073224|-/A|frameshift_variant;ENSG00000130741|ENST00000253039|EIF2S3;ENSG00000180574|ENST00000538173|EIF2S3B;nc|ENSG00000180574|Q2VIR3-2|EIF2S3B	153.03582135801034	0.006161527642367307	4				NaN	NaN	0	NaN	5578	2911	8490
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8492	24.307	NaN	18738	30	0	8576.9	0.106	+			10674	EYSKQMQRF	9	81	608.7922582085566	1215.5699634839132	2	608.7926025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EYSKQMQRF_	ENSG00000116478|ENST00000373548|HDAC1;ENSG00000196591|ENST00000519065|HDAC2;ENST00000463172.5_1_1:32757770-32792715:+|nuORF;ENST00000481281.5_1_1:32757770-32793222:+|nuORF;nc|ENSG00000196591|Q92769-3|HDAC2	118.74307786436346	0.02196067127630568	4				NaN	NaN	0	NaN	5579	2911	8490
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8493	24.309	NaN	8661.2	30	0	2674.4	0.106			+	44365	TSKLKNDAK	9	90	335.529088795321	1003.565436986163	3	335.529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TSKLKNDAK_	REV__tr|U7SLP3|U7SLP3_FUSNUV-typeATPsynthasesubunitIOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02120PE=3SV=1	14.864876125193954	0.6112419832031293	4				NaN	NaN	0	NaN	5580	2911	8490
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8494	24.311	NaN	3070.2	30	0	212.81	0.106			+	25227	LNAALGTI	8	65	386.73166760470235	771.4487822762047	2	386.73162841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LNAALGTI_	REV__ENSG00000115677|ENST00000310931|HDLBP;REV__ENST00000487169.5_1_2:242169444-242174670:-|nuORF;REV__nc|ENSG00000115677|Q00341-2|HDLBP	85.35947970620816	0.2915182781752196	4				NaN	NaN	0	NaN	5581	2911	8490
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8495	24.313	NaN	7947.6	30	0	1400	0.106	+			48547	VTNWDDMEK	9	72	577.2455865750976	1152.4766202169951	2	577.2459106445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_VTNWDDM(Oxidation (M))EK_	ACTB|p.I85T|1|0.1|ENSG00000075624|chr7:5529270-5529270|A/G|missense_variant;ENSG00000075624|ENST00000646664|ACTB;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENST00000436287.1_1_1:224052226-224052508:-|nuORF;ENST00000457622.1_1_6:46172676-46173294:+|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000502306.1_1_5:15450853-15451165:+|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF	77.53327743719008	0.1082147015697554	4				NaN	NaN	0	NaN	5582	2911	8490
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8496	24.314	NaN	7358.7	30	0	794.39	0.106	+			3985	ATATVYFKR	9	79	528.7961993475756	1055.577845761951	2	528.796142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATATVYFKR_	ENSG00000112237|ENST00000520429|CCNC;ENST00000523639.5_1_6:99998829-100016472:-|nuORF	93.5975768576971	0.05472259948179787	4				NaN	NaN	0	NaN	5583	2911	8490
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8497	24.316	NaN	4077.4	30	0	803.11	0.036			+	-1	VFHSLLCMV	9	66	553.2825273897646	1104.550501846329	2	553.2824096679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_VFHSLLC(Carbamidomethyl (C))MV_	REV__ENST00000361131.4_1_6:150570435-150570705:+|nuORF	33.51558372728122	0.4900267029546261	4				NaN	NaN	0	NaN	5584	2911	8490
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8515	24.354	NaN	12048	30	0	4483.9	0.214	+			9317	EIEALIHR	8	90	327.52210149296474	979.5444750790942	3	327.5222473144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EIEALIHR_	ENSG00000145555|ENST00000513610|MYO10;nc|ENSG00000145555|Q9HD67-3|MYO10	33.51558372728122	0.7005509609380386	4				NaN	NaN	0	NaN	5599	2914	8514
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8516	24.357	NaN	4844.5	30	0	964.07	0.106				-1	KQSGDVTCN	9	53	504.72399582744976	1007.4334387216995	2	504.7236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_KQSGDVTC(Carbamidomethyl (C))N_	ENSG00000123384|ENST00000243077|LRP1;ENST00000556356.1_1_12:57602422-57606335:+|nuORF	26.69291269510374	0.5537881896960711	4				NaN	NaN	0	NaN	5600	2914	8514
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8517	24.359	NaN	4472.4	30	0	830.62	0.106				-1	 	0	71	384.77192393383325	767.5292949344665	2	384.7721252441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5601	2914	8514
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8518	24.361	NaN	11758	30	0	1596.4	0.106	+			23258	KYISKPENL	9	80	546.3085313363076	1090.6025097394152	2	546.3084716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KYISKPENL_	ENSG00000102547|ENST00000409308|CAB39L;ENSG00000135932|ENST00000258418|CAB39;ENST00000493540.1_1_2:231678823-231682621:+|nuORF	90.60085204095205	0.06317133949006545	4				NaN	NaN	0	NaN	5602	2914	8514
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8519	24.363	NaN	5675.2	30	0	935.24	0.106	+			36644	SGLESIISII	10	88	344.5378192526587	1030.5916283581762	3	344.5380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SGLESIISII_	ENSG00000169710|ENST00000306749|FASN	28.081489160057373	0.6505064946289502	4				NaN	NaN	0	NaN	5603	2914	8514
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8520	24.365	NaN	6734	30	0	1142.4	0.035			+	20630	KGGDDEGVIR	10	71	523.2679475316983	1044.5213421301964	2	523.2698364257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KGGDDEGVIR_	REV__ENSG00000188732|ENST00000344962|FAM221A;REV__ENST00000462546.5_1_7:23719819-23732088:+|nuORF;REV__nc|ENSG00000188732|A4D161-2|FAM221A	77.31757898189308	0.2175361111083648	4				NaN	NaN	0	NaN	5604	2914	8514
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8521	24.365	NaN	3728.8	30	0	517.12	0.14	+			39354	STCIYGGAPK	10	59	527.2551387129176	1052.4957244926352	2	527.2554931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_STC(Carbamidomethyl (C))IYGGAPK_	DDX5|p.D424Ifs*31|1|0.03|ENSG00000108654|chr17:64500720-64500721|-/AAGCAATTAAT|frameshift_variant;DDX5|p.D572Nfs*6|1|0.04|ENSG00000108654|chr17:64500054-64500055|-/TGACAAGATAGTT|frameshift_variant;DDX5|p.R502Gfs*87|1|0.21|ENSG00000108654|chr17:64500264-64500264|T/-|frameshift_variant;ENSG00000100201|ENST00000403230|DDX17;ENSG00000108654|ENST00000225792|DDX5;ENST00000216019.11_1_22:38888049-38902242:-|nuORF;ENST00000432525.5_1_22:38886367-38903636:-|nuORF;ENST00000581230.5_1_17:62498125-62502378:-|nuORF;ENST00000583894.1_1_17:62499542-62500133:-|nuORF;nc|ENSG00000100201|Q92841-1|DDX17;nc|ENSG00000100201|Q92841-2|DDX17;nc|ENSG00000100201|Q92841-3|DDX17;nc|ENSG00000108654|P17844-2|DDX5	60.11826168202944	0.36476464221954025	4				NaN	NaN	0	NaN	5605	2914	8514
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8539	24.403	NaN	30367	30	0	8320.1	0.214	+			36229	SELVQKAKL	9	97	339.2095750533093	1014.606895760128	3	339.2097473144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SELVQKAKL_	ENSG00000166913|ENST00000353703|YWHAB;nc|ENSG00000166913|P31946-2|YWHAB	79.71258880314673	0.09879134589249085	4				NaN	NaN	0	NaN	5620	2917	8538
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8540	24.407	NaN	15068	30	0	6710.8	0.106	+			28467	NFTQKLIDL	9	80	364.5412468025323	1090.601911007797	3	364.5414733886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NFTQKLIDL_	ENSG00000163961|ENST00000318037|RNF168;RNF168|p.T509Nfs*11|1|0.1|ENSG00000163961|chr3:196472011-196472012|-/G|frameshift_variant	51.33545320467046	0.2872990594074956	4				NaN	NaN	0	NaN	5621	2917	8538
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8541	24.409	NaN	15206	30	0	2017.5	0.106	+			11148	FGHSSTSAL	9	74	453.71931929184655	905.4240856504931	2	453.7192687988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FGHSSTSAL_	ENSG00000086758|ENST00000262854|HUWE1;nc|ENSG00000086758|Q7Z6Z7-2|HUWE1;nc|ENSG00000086758|Q7Z6Z7-3|HUWE1	79.45101966838831	0.09992237243120712	4				NaN	NaN	0	NaN	5622	2917	8538
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8542	24.411	NaN	4233.8	30	0	1483.9	0.106			+	22084	KSLRAQEE	8	59	480.7604530069163	959.5063530806326	2	480.76104736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KSLRAQEE_	REV__ENSG00000110693|ENST00000683767|SOX6;REV__ENSG00000134532|ENST00000451604|SOX5;REV__nc|ENSG00000110693|P35712-2|SOX6;REV__nc|ENSG00000110693|P35712-3|SOX6;REV__nc|ENSG00000110693|P35712-4|SOX6;REV__nc|ENSG00000134532|P35711-2|SOX5;REV__nc|ENSG00000134532|P35711-3|SOX5;REV__nc|ENSG00000134532|P35711-4|SOX5;REV__nc|ENSG00000134532|P35711-5|SOX5;REV__SOX5|p.K639Sfs*77|1|0.78|ENSG00000134532|chr12:23536525-23536525|T/-|frameshift_variant	45.97224482568171	0.6192535143389125	4				NaN	NaN	0	NaN	5623	2917	8538
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8543	24.413	NaN	7906.5	30	0	985.18	0.106	+			13814	GQNPTNAEVLK	11	79	585.8094012118341	1169.6042494904682	2	585.809814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GQNPTNAEVLK_	ENSG00000092841|ENST00000550697|MYL6;ENSG00000196465|ENST00000695999|MYL6B;ENST00000405661.8_1_12:56547702-56549525:+|nuORF;ENST00000546630.1_1_12:56552185-56553570:+|nuORF;ENST00000547703.5_1_12:56552185-56553570:+|nuORF;ENST00000548725.5_1_12:56552185-56553955:+|nuORF;ENST00000549178.5_1_12:56548807-56551507:+|nuORF;ENST00000550152.5_1_12:56547702-56549709:+|nuORF;nc|ENSG00000092841|P60660-2|MYL6	68.62578634547417	0.24719609611953774	4				NaN	NaN	0	NaN	5624	2917	8538
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8544	24.415	NaN	2828.6	30	0	565.17	0.033			+	7011	CRSLSPAPA	9	36	451.232177734375	NaN	0	451.232177734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_CRSLSPAPA_	REV__CHD8|p.N2371Ifs*6|1|0.32|ENSG00000100888|chr14:21391017-21391017|T/-|frameshift_variant;REV__CHD8|p.N2371Kfs*2|2|0.24|ENSG00000100888|chr14:21391016-21391017|-/T|frameshift_variant;REV__ENSG00000100888|ENST00000646647|CHD8;REV__nc|ENSG00000100888|Q9HCK8-2|CHD8	23.04248740728303	0.3589936788096251	4				NaN	NaN	0	NaN	5625	2917	8538
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8545	24.415	NaN	4147	30	0	1423.3	0.142			+	43538	TGWLVTMTH	9	55	349.17586341395037	1044.5057608420511	3	349.1762390136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TGWLVTMTH_	REV__nc|ENSG00000203666|Q5VUJ9|EFCAB2	25.57405402267927	0.5642445186134241	4				NaN	NaN	0	NaN	5626	2917	8538
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8564	24.459	NaN	13767	30	0	4812.5	0.214	+			36929	SIKVTLPGR	9	83	324.20612347687785	969.5965410308336	3	324.20623779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIKVTLPGR_	ENST00000518462.1_1_7:150066562-150066703:+|nuORF	24.519189625965996	0.574102787014149	4				NaN	NaN	0	NaN	5642	2920	8563
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8565	24.463	NaN	30034	30	0	4420.4	0.106	+			29261	NYARGHYTI	9	86	547.7726515664411	1093.5307501996822	2	547.772705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NYARGHYTI_	ENSG00000075886|ENST00000321253|TUBA3D;ENSG00000123416|ENST00000336023|TUBA1B;ENSG00000127824|ENST00000248437|TUBA4A;ENSG00000152086|ENST00000312988|TUBA3E;ENSG00000167552|ENST00000301071|TUBA1A;ENSG00000167553|ENST00000301072|TUBA1C;ENSG00000198033|ENST00000400113|TUBA3C;ENST00000462806.5_1_2:220116196-220118580:-|nuORF;ENST00000530835.1_1_11:90015825-90016947:+|nuORF;ENST00000548363.1_1_12:49580068-49582762:-|nuORF;ENST00000550254.1_1_12:49580068-49580335:-|nuORF;nc|ENSG00000127824|P68366-2|TUBA4A;nc|ENSG00000167552|Q71U36-2|TUBA1A;nc|ENSG00000198033|P0DPH7-2|TUBA3C;TUBA3C|p.G144Afs*24|1|0.32|ENSG00000198033|chr13:19177554-19177554|A/-|frameshift_variant;TUBA3C|p.T361Rfs*18|1|0.17|ENSG00000198033|chr13:19174136-19174136|G/-|frameshift_variant;TUBA3D|p.G366Efs*13|1|0.17|ENSG00000075886|chr2:131482588-131482588|G/-|frameshift_variant;TUBA3D|p.V328Pfs*54|1|0.45|ENSG00000075886|chr2:131480665-131480666|-/CCCAAAGA|frameshift_variant;TUBA3E|p.Q176Rfs*14|1|0.58|ENSG00000152086|chr2:130194316-130194316|G/-|frameshift_variant;TUBA4A|p.V182Gfs*32|1|0.04|ENSG00000127824|chr2:219251156-219251157|-/TACACCA|frameshift_variant	101.60071028292904	0.0375685401170269	4				NaN	NaN	0	NaN	5643	2920	8563
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8566	24.467	NaN	22633	30	0	5418.1	0.036			+	31991	QRFRDLAL	8	81	340.19769695806656	1017.5712614743998	3	340.1977844238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QRFRDLAL_	REV__SCN11A|p.R841Q|1|0.28|ENSG00000168356|chr3:38894846-38894846|C/T|missense_variant	30.503639358989545	0.7238069182250283	4				NaN	NaN	0	NaN	5644	2920	8563
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8584	24.504	NaN	20198	30	0	3600.9	0.214	+			41734	SVSGYIYHK	9	73	527.272408467756	1052.530264002312	2	527.2721557617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSGYIYHK_	ENSG00000005007|ENST00000262803|UPF1;nc|ENSG00000005007|Q92900|UPF1	122.1759843771914	0.019882474861609503	4				NaN	NaN	0	NaN	5659	2923	8583
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8585	24.508	NaN	13981	30	0	5288.8	0.106			+	29583	PFLPHEGASV	10	76	351.8502049486256	1052.5287854460769	3	351.8503112792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PFLPHEGASV_	REV__ENST00000563115.5_1_16:57496627-57503283:+|nuORF	27.882242232435846	0.6521336255503853	4				NaN	NaN	0	NaN	5660	2923	8583
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8586	24.51	NaN	8000.2	30	0	1512.5	0.106	+			33753	RPRNTPIF	8	88	334.19426600206333	999.56096860639	3	334.1944274902344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RPRNTPIF_	ENST00000469172.5_1_10:70091245-70091596:+|nuORF	20.481830146152948	0.8005983782650069	4				NaN	NaN	0	NaN	5661	2923	8583
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8587	24.512	NaN	6298.6	30	0	1910.3	0.106			+	-1	TCISFIKK	8	71	498.7809558744734	995.5473588157469	2	498.7808837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_TC(Carbamidomethyl (C))ISFIKK_	REV__KCNH3|p.E478K|1|0.47|ENSG00000135519|chr12:49549137-49549137|G/A|missense_variant	74.25504064058377	0.37144338840759816	4				NaN	NaN	0	NaN	5662	2923	8583
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8588	24.514	NaN	3653.6	30	0	328.42	0.106			+	21655	KPVLNSLARS	10	62	542.8274021910249	1083.6402514488498	2	542.8275756835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KPVLNSLARS_	REV__ARFGEF2-SULF2|1|fusion;REV__ARFGEF2-SULF2|2|fusion;REV__ENSG00000196562|ENST00000688720|SULF2;REV__nc|ENSG00000196562|Q8IWU5-2|SULF2	82.7504851949679	0.1731497355276012	4				NaN	NaN	0	NaN	5663	2923	8583
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8589	24.515	NaN	5831.6	30	0	829.94	0.036			+	2786	ARRDEDADQ	9	54	538.2414105824909	1074.4682682317816	2	538.2417602539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ARRDEDADQ_	REV__ENSG00000168404|ENST00000308807|MLKL;REV__nc|ENSG00000168404|Q8NB16-2|MLKL	23.52269567125451	0.5834155526130771	4				NaN	NaN	0	NaN	5664	2923	8583
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8590	24.516	NaN	2912.4	30	0	196.16	0.139			+	36700	SGRTMSTK	8	61	434.22132698274316	866.4281010322863	2	434.221435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SGRTMSTK_	REV__ENST00000592828.5_1_19:11687597-11687906:-|nuORF	51.33545320467046	0.5859736979383976	4				NaN	NaN	0	NaN	5665	2923	8583
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8608	24.556	NaN	9760.2	30	0	923.98	0.215	+			50681	YEEGPGKNL	9	74	503.74600828744695	1005.4774636416939	2	503.74566650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YEEGPGKNL_	ENSG00000127184|ENST00000247655|COX7C	118.74307786436346	0.02196067127630568	4				NaN	NaN	0	NaN	5680	2926	8607
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8609	24.559	NaN	16835	30	0	2431.4	0.106			+	21837	KRGKAEKPLEE	11	89	642.8676815710942	NaN	0	642.867431640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KRGKAEKPLEE_	REV__ENSG00000215187|ENST00000399742|FAM166B;REV__ENST00000492890.5_1_9:35561867-35563864:-|nuORF;REV__nc|ENSG00000215187|A8MTA8-2|CIMIP2B	46.45678178249821	0.34076744753725324	4				NaN	NaN	0	NaN	5681	2926	8607
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8610	24.562	NaN	7625.7	30	0	2516.1	0.106	+			28660	NLNPVFGGSGP	11	61	529.7658684586908	1057.5171839841814	2	529.7662963867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NLNPVFGGSGP_	ENSG00000138592|ENST00000307179|USP8;nc|ENSG00000138592|P40818-2|USP8;USP8|p.K997Rfs*2|1|0.11|ENSG00000138592|chr15:50497178-50497178|A/-|frameshift_variant	29.170058357718403	0.683821074385409	4				NaN	NaN	0	NaN	5682	2926	8607
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8611	24.563	NaN	3981.7	30	0	629.24	0.106	+			41755	SVSLPSVKK	9	73	472.79312734025416	943.5717017473083	2	472.7922668457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVSLPSVKK_	ENSG00000034677|ENST00000341084|RNF19A;nc|ENSG00000034677|Q9NV58-2|RNF19A;nc|ENSG00000034677|Q9NV58-3|RNF19A;RNF19A|p.R63Efs*5|1|0.16|ENSG00000034677|chr8:100287988-100287988|T/-|frameshift_variant	62.107414245175825	0.1960472003779324	4				NaN	NaN	0	NaN	5683	2926	8607
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8612	24.565	NaN	6682.4	30	0	1256.8	0.106	+			4568	ATLEETLVKKK	11	78	630.3823543053204	1258.7501556774407	2	630.3825073242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATLEETLVKKK_	ENSG00000254093|ENST00000314787|PINX1	84.31045756130733	0.12206600909821903	4				NaN	NaN	0	NaN	5684	2926	8607
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8613	24.567	NaN	3127.5	30	0	341.8	0.031				-1	 	0	71	344.2248241311436	686.4350953290872	2	344.2249755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5685	2926	8607
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8631	24.604	NaN	6575.4	30	0	1062.7	0.214	+			9125	EGLGQVNHT	9	62	477.7356669696896	953.4567810061792	2	477.7351989746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EGLGQVNHT_	ENSG00000103034|ENST00000570248|NDRG4;ENST00000563209.1_1_16:58545213-58545477:+|nuORF;nc|ENSG00000103034|Q9ULP0-2|NDRG4;nc|ENSG00000103034|Q9ULP0-3|NDRG4;nc|ENSG00000103034|Q9ULP0-4|NDRG4;nc|ENSG00000103034|Q9ULP0-5|NDRG4;nc|ENSG00000103034|Q9ULP0-6|NDRG4;nc|ENSG00000103034|Q9ULP0-7|NDRG4;nc|ENSG00000103034|Q9ULP0-8|NDRG4	49.44154591367651	0.3095138337212152	4				NaN	NaN	0	NaN	5700	2929	8630
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8632	24.607	NaN	4513.8	30	0	882.18	0.106			+	-1	CCPPVAESNR	10	53	566.7471923828125	NaN	0	566.7471923828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_C(Carbamidomethyl (C))CPPVAESNR_	REV__ENST00000366978.5_1_1:212955724-212957744:-|nuORF	27.882242232435846	0.4086243523356342	4				NaN	NaN	0	NaN	5701	2929	8630
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8633	24.609	NaN	6326.7	30	0	1163.9	0.106			+	-1	YADCLLRR	8	56	533.7786513839997	1065.5427498347992	2	533.77880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_YADC(Carbamidomethyl (C))LLRR_	REV__ENSG00000083799|ENST00000427738|CYLD;REV__nc|ENSG00000083799|Q9NQC7-2|CYLD	42.47446043378293	0.6409579893742323	4				NaN	NaN	0	NaN	5702	2929	8630
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8634	24.611	NaN	7164.7	30	0	1043.4	0.106			+	38380	SRSSSLLLSIM	11	68	605.3278041503047	1208.6410553674093	2	605.8289184570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_SRSSSLLLSIM(Oxidation (M))_	REV__RIT2|p.K198Qfs*60|1|0.4|ENSG00000152214|chr18:42743555-42743559|TTCTC/-|frameshift_variant	49.536043120802724	0.4274608637932522	4				NaN	NaN	0	NaN	5703	2929	8630
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8635	24.613	NaN	3132.3	30	0	579.44	0.106			+	547	ADEVQYTFQ	9	59	550.7486572265625	NaN	0	550.7486572265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ADEVQYTFQ_	REV__ENSG00000183090|ENST00000329798|FREM3	25.57405402267927	0.3484490411150625	4				NaN	NaN	0	NaN	5704	2929	8630
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8636	24.615	NaN	2232.8	30	0	200.89	0.032	+			28486	NGLLGRGS	8	54	387.2184700156161	NaN	0	387.2186279296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NGLLGRGS_	ENSG00000197006|ENST00000358154|METTL9;nc|ENSG00000197006|Q9H1A3-2|METTL9	44.116797842482775	1.7418937515398478	4				NaN	NaN	0	NaN	5705	2929	8630
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8637	24.615	NaN	3893.8	30	0	737.38	0.142	+			18993	IVTLTRITTE	10	69	573.840087890625	NaN	0	573.840087890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IVTLTRITTE_	ADGRV1|p.F5465Lfs*13|1|0.26|ENSG00000164199|chr5:90828964-90828964|T/-|frameshift_variant;ADGRV1|p.G3807Dfs*10|1|0.16|ENSG00000164199|chr5:90755021-90755021|A/-|frameshift_variant;ADGRV1|p.L4664Cfs*23|1|0.28|ENSG00000164199|chr5:90789790-90789790|A/-|frameshift_variant;ADGRV1|p.T5738Pfs*48|1|0.19|ENSG00000164199|chr5:90853288-90853288|A/-|frameshift_variant;ADGRV1|p.Y5091Tfs*7|2|0.25|ENSG00000164199|chr5:90810525-90810525|T/-|frameshift_variant;ENSG00000164199|ENST00000405460|ADGRV1;ENST00000509621.1_3_5:89989878-90055411:+|nuORF	28.5767321226876	0.40634399112407993	4				NaN	NaN	0	NaN	5706	2929	8630
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8655	24.655	NaN	86272	30	0	42497	0.215	+			45095	TVIHFNNPK	9	106	357.19767768227587	1068.5712036470277	3	357.19805908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVIHFNNPK_	ENSG00000134717|ENST00000313334|BTF3L4;ENSG00000145741|ENST00000380591|BTF3;ENST00000418879.1_1_6:137865036-137865375:-|nuORF;nc|ENSG00000134717|Q96K17-2|BTF3L4;nc|ENSG00000145741|P20290-2|BTF3	54.722347961057174	0.257609425301511	4				NaN	NaN	0	NaN	5721	2932	8654
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8656	24.659	NaN	10796	30	0	1547	0.106	+			40038	STMVDVRVMKK	11	85	647.3556364862606	1292.696720039321	2	647.3558349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STMVDVRVMKK_	ENSG00000085224|ENST00000373344|ATRX;nc|ENSG00000085224|P46100-2|ATRX;nc|ENSG00000085224|P46100-3|ATRX;nc|ENSG00000085224|P46100-4|ATRX;nc|ENSG00000085224|P46100-5|ATRX	92.94320115499777	0.08672601920733168	4				NaN	NaN	0	NaN	5722	2932	8654
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8657	24.661	NaN	18358	30	0	8127.2	0.106	+			12773	GELPALSLGH	10	99	331.85022643667116	992.5288499102135	3	331.85052490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GELPALSLGH_	DNAH11|p.A2559Sfs*4|1|0.42|ENSG00000105877|chr7:21738723-21738724|-/A|frameshift_variant;DNAH11|p.A4348Tfs*8|1|0.06|ENSG00000105877|chr7:21894990-21894991|-/CACTTTA|frameshift_variant;DNAH11|p.C1251Mfs*5|1|0.41|ENSG00000105877|chr7:21606521-21606522|-/A|frameshift_variant;DNAH11|p.C1849Sfs*8|1|0.05|ENSG00000105877|chr7:21683868-21683869|-/CTAAAATTCTCATAAATAG|frameshift_variant;DNAH11|p.E3097Nfs*4|1|0.21|ENSG00000105877|chr7:21773946-21773946|A/-|frameshift_variant;DNAH11|p.K1250Nfs*43|1|0.63|ENSG00000105877|chr7:21606522-21606522|A/-|frameshift_variant;DNAH11|p.K873Nfs*4|1|0.31|ENSG00000105877|chr7:21591523-21591523|A/-|frameshift_variant;DNAH11|p.L3180Sfs*6|1|0.05|ENSG00000105877|chr7:21784481-21784482|-/CAGA|frameshift_variant;DNAH11|p.L441Ifs*25|1|0.26|ENSG00000105877|chr7:21570187-21570188|-/A|frameshift_variant;DNAH11|p.M199Hfs*42|1|0.05|ENSG00000105877|chr7:21558898-21558899|-/AACAT|frameshift_variant;DNAH11|p.M199Lfs*3|1|0.04|ENSG00000105877|chr7:21558900-21558901|-/TTAAATTA|frameshift_variant;DNAH11|p.N2201Kfs*6|1|0.04|ENSG00000105877|chr7:21707754-21707755|-/AGTAAAAGATTTC|frameshift_variant;DNAH11|p.N3090Kfs*2|1|0.09|ENSG00000105877|chr7:21773928-21773929|-/A|frameshift_variant;DNAH11|p.N833Tfs*2|1|0.17|ENSG00000105877|chr7:21591404-21591404|A/-|frameshift_variant;DNAH11|p.Q945Kfs*4|1|0.32|ENSG00000105877|chr7:21599946-21599946|T/-|frameshift_variant;DNAH11|p.S2374Qfs*2|1|0.14|ENSG00000105877|chr7:21717910-21717911|-/C|frameshift_variant;DNAH11|p.T4414Nfs*34|1|0.37|ENSG00000105877|chr7:21900050-21900051|-/A|frameshift_variant;DNAH11|p.T4414Qfs*72|3|0.34|ENSG00000105877|chr7:21900051-21900051|A/-|frameshift_variant;DNAH11|p.W2255Mfs*9|1|0.04|ENSG00000105877|chr7:21710627-21710628|-/A|frameshift_variant;ENSG00000105877|ENST00000409508|DNAH11	35.61828744233558	0.588957954432594	4				NaN	NaN	0	NaN	5723	2932	8654
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8658	24.663	NaN	12184	30	0	1057.4	0.106	+			33335	RGTVPSRYRLH	11	86	671.3788767889853	1340.7432006447705	2	671.880615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RGTVPSRYRLH_	ENST00000540114.5_3_12:27832463-27832556:+|nuORF	28.081489160057373	0.6952392775027776	4				NaN	NaN	0	NaN	5724	2932	8654
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8659	24.665	NaN	4556.8	30	0	622.85	0.106				-1	EAVLERNEM	9	64	553.7602919281865	1105.5060309231728	2	553.7603149414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_EAVLERNEM(Oxidation (M))_	ENSG00000189233|ENST00000413272|NUGGC;NUGGC|p.K555Yfs*17|1|0.07|ENSG00000189233|chr8:28033646-28033647|-/AGGTA|frameshift_variant	31.529811441608018	0.5085848003137583	4				NaN	NaN	0	NaN	5725	2932	8654
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8660	24.667	NaN	4170.3	30	0	813.34	0.036	+			46503	VEVAIEALSAN	11	66	558.3031221525058	1114.5916913718115	2	559.3128051757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VEVAIEALSAN_	ENSG00000066032|ENST00000402739|CTNNA2;nc|ENSG00000066032|P26232-2|CTNNA2;nc|ENSG00000066032|P26232-3|CTNNA2;nc|ENSG00000066032|P26232-4|CTNNA2;nc|ENSG00000066032|P26232-5|CTNNA2;nc|ENSG00000066032|P26232-6|CTNNA2	26.749707702089633	0.7092085788826945	4				NaN	NaN	0	NaN	5726	2932	8654
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8678	24.705	NaN	8148.1	30	0	1537.4	0.214				-1	 	0	80	520.2801108246899	519.2728343580899	1	520.2799682617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5741	2935	8677
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8679	24.708	NaN	11076	30	0	2334.1	0.106				-1	ACKMKFALL	9	97	347.52545184983103	1039.5545261496932	3	347.5256652832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_ACKM(Oxidation (M))KFALL_	PDIA6|p.R365C|1|0.07|ENSG00000143870|chr2:10787345-10787345|G/A|missense_variant	34.172542307311794	0.4838870758800184	4				NaN	NaN	0	NaN	5742	2935	8677
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8680	24.711	NaN	13867	30	0	1478.2	0.106	+			39970	STMGYMMAKK	10	84	574.2694096769204	1146.5242664206407	2	574.26953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STMGYMMAKK_	ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;ENST00000518337.1_1_8:74128289-74128592:-|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P	101.25262130126117	0.07397688119410509	4				NaN	NaN	0	NaN	5743	2935	8677
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8681	24.712	NaN	4749.9	30	0	802.22	0.106			+	24732	LHQTRSGA	8	61	435.2346821108412	868.4548112884825	2	435.23486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LHQTRSGA_	REV__ENSG00000115183|ENST00000263635|TANC1;REV__ENST00000470074.1_1_2:160076105-160087520:+|nuORF;REV__nc|ENSG00000115183|Q9C0D5-2|TANC1	29.14955571784316	0.7342621283720113	4				NaN	NaN	0	NaN	5744	2935	8677
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8682	24.714	NaN	2942.3	30	0	453.27	0.106				-1	 	0	71	384.77192393383325	767.5292949344665	2	384.7720947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5745	2935	8677
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8683	24.716	NaN	4768.3	30	0	759.75	0.035				-1	 	0	81	336.5340575921047	1006.5803433765142	3	336.5340881347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5746	2935	8677
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8684	24.717	NaN	3220.7	30	0	284.96	0.14			+	26699	LVIAAILRQ	9	59	498.8326815132706	995.6508100933412	2	498.8322448730469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LVIAAILRQ_	REV__ENSG00000104044|ENST00000354638|OCA2;REV__nc|ENSG00000104044|Q04671-2|OCA2;REV__OCA2|p.F810Sfs*7|1|0.32|ENSG00000104044|chr15:27844962-27844962|A/-|frameshift_variant	35.200714571348534	0.47427825964483533	4				NaN	NaN	0	NaN	5747	2935	8677
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8702	24.756	NaN	31619	30	0	2762.9	0.214	+			49636	VYIEKNDKL	9	80	561.3139955937768	1120.6134382543535	2	561.3140258789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYIEKNDKL_	ENSG00000065361|ENST00000267101|ERBB3;ENST00000546884.1_1_12:56474084-56480451:+|nuORF;ENST00000549472.1_1_12:56480319-56481575:+|nuORF;ERBB3|p.A805Gfs*22|1|0.1|ENSG00000065361|chr12:56097177-56097178|-/G|frameshift_variant;ERBB3|p.A805Hfs*95|1|0.33|ENSG00000065361|chr12:56097178-56097178|G/-|frameshift_variant;ERBB3|p.R1080Vfs*22|1|0.14|ENSG00000065361|chr12:56101093-56101093|C/-|frameshift_variant;nc|ENSG00000065361|P21860-3|ERBB3;nc|ENSG00000065361|P21860-4|ERBB3	163.1509380574825	0.003936019289634439	4				NaN	NaN	0	NaN	5762	2938	8701
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8703	24.76	NaN	5888.6	30	0	2318.2	0.106	+			45644	TYRVETVKP	9	79	364.87408916692294	1091.6004381009689	3	364.5414733886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TYRVETVKP_	ENSG00000198000|ENST00000442668|NOL8;ENST00000544867.5_1_9:95060120-95062368:-|nuORF;nc|ENSG00000198000|Q76FK4-2|NOL8;nc|ENSG00000198000|Q76FK4-4|NOL8	25.450171626174864	0.5654022654467333	4				NaN	NaN	0	NaN	5763	2938	8701
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8704	24.762	NaN	5315.8	30	0	700.38	0.106			+	42266	TAAVDNGQAQL	11	66	544.2738793851588	1086.5332058371175	2	544.2716674804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TAAVDNGQAQL_	REV__TTC7B|p.A815V|1|0.1|ENSG00000165914|chr14:90541456-90541456|G/A|missense_variant	65.46538089061403	0.2746690761028526	4				NaN	NaN	0	NaN	5764	2938	8701
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8705	24.764	NaN	6485.4	30	0	1275.9	0.106	+			15265	GTTHNFLYK	9	77	540.7771076662842	1079.5396623993684	2	540.7775268554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTTHNFLYK_	ENSG00000105499|ENST00000599921|PLA2G4C;ENST00000596510.5_1_19:48556252-48575644:-|nuORF;ENST00000599239.5_1_19:48565437-48599986:-|nuORF;nc|ENSG00000105499|Q9UP65-2|PLA2G4C;nc|ENSG00000105499|Q9UP65-3|PLA2G4C	77.31757898189308	0.1091473830098891	4				NaN	NaN	0	NaN	5765	2938	8701
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8706	24.766	NaN	2227.2	30	0	382.95	0.106			+	23663	LASEYSKR	8	45	477.25633503286997	952.49811713254	2	477.25592041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LASEYSKR_	REV__CCDC180|p.K1351Sfs*28|1|0.14|ENSG00000197816|chr9:97364063-97364063|C/-|frameshift_variant;REV__CCDC180|p.K1583Nfs*17|3|0.32|ENSG00000197816|chr9:97374551-97374551|C/-|frameshift_variant;REV__CCDC180|p.L667Tfs*8|1|0.13|ENSG00000197816|chr9:97330353-97330354|-/A|frameshift_variant;REV__CCDC180|p.S1054Lfs*19|1|0.44|ENSG00000197816|chr9:97354591-97354591|T/-|frameshift_variant;REV__ENSG00000197816|ENST00000529487|CCDC180;REV__ENST00000375206.6_1_9:100053158-100139173:+|nuORF;REV__ENST00000460482.6_1_9:100070037-100107975:+|nuORF;REV__ENST00000494917.6_1_9:100069637-100105846:+|nuORF;REV__ENST00000529787.2_1_9:100053158-100088872:+|nuORF;REV__nc|ENSG00000197816|Q9P1Z9|CCDC180	30.503639358989545	0.7238069182250283	4				NaN	NaN	0	NaN	5766	2938	8701
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8707	24.768	NaN	1684.3	30	0	229.48	0.034			+	-1	VIHLAKQC	8	45	484.7694091796875	NaN	0	484.7694091796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_VIHLAKQC(Carbamidomethyl (C))_	REV__ENSG00000110975|ENST00000228567|SYT10;REV__SYT10|p.F74Lfs*16|1|0.39|ENSG00000110975|chr12:33426425-33426425|A/-|frameshift_variant	21.70233525837049	1.7418937515398478	4				NaN	NaN	0	NaN	5767	2938	8701
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8725	24.805	NaN	14116	30	0	5177.2	0.214	+			19849	KEEHEVAVL	9	72	527.2823404291302	1052.5501279250602	2	527.2824096679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEEHEVAVL_	ENSG00000142089|ENST00000399808|IFITM3;ENSG00000185885|ENST00000408968|IFITM1;IFITM1|p.S16Afs*9|1|0.39|ENSG00000185885|chr11:314210-314210|C/-|frameshift_variant	62.107414245175825	0.1960472003779324	4				NaN	NaN	0	NaN	5782	2941	8724
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8726	24.809	NaN	5671.3	30	0	635.01	0.106	+			4378	ATGYSHLLK	9	74	495.2744813772046	988.5344098212092	2	495.2742004394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATGYSHLLK_	nc|ENSG00000185238|O60678-2|PRMT3	51.19269402634007	0.2889735674168909	4				NaN	NaN	0	NaN	5783	2941	8724
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8727	24.811	NaN	11144	30	0	922.87	0.106	+			48523	VTNNVIRLK	9	85	528.8300311525074	1055.6455093718148	2	528.829833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTNNVIRLK_	ENSG00000095319|ENST00000372577|NUP188;ENST00000477069.5_1_9:131747266-131765892:+|nuORF;nc|ENSG00000095319|Q5SRE5-2|NUP188;NUP188|p.L837Wfs*19|1|0.15|ENSG00000095319|chr9:128988157-128988157|C/-|frameshift_variant	94.4091291819064	0.0524345700464502	4				NaN	NaN	0	NaN	5784	2941	8724
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8728	24.813	NaN	10352	30	0	2341.9	0.106	+			15689	GVMTVLIKR	9	74	516.8156829743101	1031.6168130154201	2	516.8153686523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_GVM(Oxidation (M))TVLIKR_	ENSG00000109971|ENST00000534624|HSPA8;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;HSPA8|p.K569Dfs*6|1|0.3|ENSG00000109971|chr11:123058302-123058303|TC/-|frameshift_variant;nc|ENSG00000109971|P11142-2|HSPA8	77.31757898189308	0.1091473830098891	4				NaN	NaN	0	NaN	5785	2941	8724
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8729	24.815	NaN	5641.3	30	0	1002.4	0.106				-1	VMEELCVFSF	10	55	610.2742309570312	NaN	0	610.2742309570312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_VM(Oxidation (M))EELCVFSF_	ENSG00000170745|ENST00000304101|KCNS3	27.882242232435846	0.4086243523356342	4				NaN	NaN	0	NaN	5786	2941	8724
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8730	24.816	NaN	2188.2	30	0	228.57	0.034			+	37538	SLLSTPLAAG	10	66	465.2686736456219	NaN	0	465.26837158203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLLSTPLAAG_	REV__ENST00000571855.1_1_17:48740997-48741507:+|nuORF	60.97194046774394	0.22634118066553113	4				NaN	NaN	0	NaN	5787	2941	8724
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8747	24.851	NaN	67518	30	0	6937	0.214	+			17666	IEKKYDEEL	9	97	583.8011052769514	1165.5876576207027	2	583.8008422851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IEKKYDEEL_	ENSG00000149591|ENST00000392951|TAGLN;ENST00000533863.1_2_11:117073729-117073927:+|nuORF	183.72194652814687	0.000922403277147814	4				NaN	NaN	0	NaN	5801	2944	8746
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8748	24.855	NaN	17694	30	0	4297.2	0.106			+	26614	LTYYCTGRL	9	85	363.8513372509524	1088.5321823530571	3	363.5171813964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LTYYCTGRL_	REV__ENSG00000088812|ENST00000262919|ATRN;REV__nc|ENSG00000088812|O75882-2|ATRN;REV__nc|ENSG00000088812|O75882-3|ATRN	30.503639358989545	0.5181749237905803	4				NaN	NaN	0	NaN	5802	2944	8746
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8749	24.857	NaN	18305	30	0	2700.2	0.106			+	3376	ASPLTDEEAQ	10	73	530.7435836508282	1059.4726143684563	2	530.743896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASPLTDEEAQ_	REV__ENSG00000196547|ENST00000559717|MAN2A2;REV__nc|ENSG00000196547|P49641-1|MAN2A2	62.107414245175825	0.3466735403679669	4				NaN	NaN	0	NaN	5803	2944	8746
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8750	24.859	NaN	11731	30	0	3826	0.106	+			25121	LLQEGQHKQ	9	79	360.8645973973586	1079.5719627922758	3	360.86474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LLQEGQHKQ_	ENST00000368674.5_1_10:128191356-128211334:-|nuORF	20.94693142431847	0.6074874384046576	4				NaN	NaN	0	NaN	5804	2944	8746
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8751	24.861	NaN	10154	30	0	818.28	0.106	+			39658	STIFHVQQR	9	78	558.3031221525058	1114.5916913718115	2	558.3016967773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STIFHVQQR_	ENSG00000176920|ENST00000425340|FUT2	91.26522074875469	0.06129826844580791	4				NaN	NaN	0	NaN	5805	2944	8746
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8752	24.863	NaN	3961.7	30	0	1078.3	0.035	+			37475	SLKKKTMPA	9	65	502.30216107914424	1002.5897692250885	2	502.30194091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLKKKTMPA_	BBS12|p.E561Kfs*77|1|0.35|ENSG00000181004|chr4:122743567-122743567|A/-|frameshift_variant	24.20275056022122	0.577060078256802	4				NaN	NaN	0	NaN	5806	2944	8746
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8771	24.9	NaN	7368.8	30	0	1346.8	0.214				-1	LTCLGLNVLF	10	64	383.88248834915316	1148.6256356476595	3	383.8826904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_LTC(Carbamidomethyl (C))LGLNVLF_	ENSG00000155256|ENST00000684270|ZFYVE27;nc|ENSG00000155256|Q5T4F4-2|ZFYVE27;nc|ENSG00000155256|Q5T4F4-3|ZFYVE27;nc|ENSG00000155256|Q5T4F4-4|ZFYVE27;ZFYVE27|p.K254Efs*26|1|0.39|ENSG00000155256|chr10:97750419-97750420|-/G|frameshift_variant	21.68575002086885	0.7027366847906487	4				NaN	NaN	0	NaN	5822	2947	8770
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8772	24.904	NaN	9576	30	0	1154.3	0.106	+			41635	SVQSDQGYISR	11	83	620.3018093172209	1238.5890657012417	2	620.3019409179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVQSDQGYISR_	ENSG00000177663|ENST00000319363|IL17RA;nc|ENSG00000177663|Q96F46-2|IL17RA	85.92353377893507	0.11546253517298165	4				NaN	NaN	0	NaN	5823	2947	8770
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8773	24.906	NaN	9154.8	30	0	1430	0.106	+			19919	KEFEDKKVEL	10	79	632.8430223479422	1263.6714917626844	2	632.8427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEFEDKKVEL_	ENSG00000111707|ENST00000543473|SUDS3	82.49433358170734	0.17524247213410465	4				NaN	NaN	0	NaN	5824	2947	8770
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8774	24.908	NaN	12056	30	0	1507.6	0.106				-1	KFNDPNDPCK	10	89	617.7810154442175	1233.5474779552349	2	617.7817993164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_KFNDPNDPC(Carbamidomethyl (C))K_	ENSG00000156502|ENST00000359655|SUPV3L1	85.16082228582465	0.15877915086237185	4				NaN	NaN	0	NaN	5825	2947	8770
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8775	24.91	NaN	6457.6	30	0	918.21	0.106	+			40197	STSAFSRLEK	10	72	563.2987828710875	1124.583012808975	2	563.298583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STSAFSRLEK_	ENSG00000059377|ENST00000448866|TBXAS1;ENST00000476637.5_1_7:139529186-139636014:+|nuORF;nc|ENSG00000059377|P24557-3|TBXAS1;nc|ENSG00000059377|P24557-4|TBXAS1	89.02883481214508	0.13663399911061233	4				NaN	NaN	0	NaN	5826	2947	8770
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8776	24.912	NaN	3701.6	30	0	436.57	0.035	+			20089	KEKIQALPT	9	62	514.31126838219	1026.6079838311798	2	514.3112182617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KEKIQALPT_	ENSG00000070423|ENST00000292363|RNF126	39.252832667884924	0.4290233611298554	4				NaN	NaN	0	NaN	5827	2947	8770
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8777	24.912	NaN	4364.4	30	0	909.84	0.142			+	17692	IELEEVDGTW	10	61	595.7800903320312	NaN	0	595.7800903320312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IELEEVDGTW_	REV__CPSF3|p.L533W|1|0.11|ENSG00000119203|chr2:9455752-9455752|T/G|missense_variant	27.882242232435846	0.4086243523356342	4				NaN	NaN	0	NaN	5828	2947	8770
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8795	24.95	NaN	26669	30	0	5390.7	0.214	+			18320	IPTKQTQTF	9	82	532.2928504744916	1062.5711480157831	2	532.29296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IPTKQTQTF_	ENSG00000109971|ENST00000534624|HSPA8;ENSG00000126803|ENST00000247207|HSPA2;ENSG00000173110|ENST00000309758|HSPA6;ENST00000397642.3_1_1:247394123-247394771:+|nuORF;ENST00000425843.1_1_X:120337248-120337797:-|nuORF;ENST00000445535.1_1_1:161576981-161578004:+|nuORF;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;ENST00000552265.2_1_12:111822376-111823062:+|nuORF;HSPA6|p.D632Gfs*9|1|0.12|ENSG00000173110|chr1:161526547-161526548|-/G|frameshift_variant;HSPA8|p.K569Dfs*6|1|0.3|ENSG00000109971|chr11:123058302-123058303|TC/-|frameshift_variant;nc|ENSG00000109971|P11142-2|HSPA8	126.24258497203832	0.01742065577488747	4				NaN	NaN	0	NaN	5843	2950	8794
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8796	24.954	NaN	5552	30	0	883.72	0.106	+			20212	KELGSSTNAL	10	59	510.2722241426988	1018.5298953521976	2	510.2720642089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KELGSSTNAL_	ENSG00000125870|ENST00000246071|SNRPB2;ENST00000478522.1_1_20:16710709-16713038:+|nuORF	79.48907831485694	0.19979514868675113	4				NaN	NaN	0	NaN	5844	2950	8794
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8797	24.956	NaN	2946.8	30	0	380.36	0.106			+	24279	LEVSQRVL	8	55	472.28246200996267	942.5503710867254	2	472.2820129394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LEVSQRVL_	REV__CROCC|p.Q588Pfs*15|1|0.33|ENSG00000058453|chr1:16940044-16940045|-/CC|frameshift_variant;REV__ENSG00000058453|ENST00000375541|CROCC	53.351449002276354	0.5676011784961348	4				NaN	NaN	0	NaN	5845	2950	8794
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8798	24.957	NaN	3308.8	30	0	314.71	0.106			+	560	ADGGEDVIIA	10	58	480.2376404203396	958.4607279074792	2	480.2371520996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ADGGEDVIIA_	REV__ENSG00000241945|ENST00000291576|PWP2	35.61828744233558	0.588957954432594	4				NaN	NaN	0	NaN	5846	2950	8794
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8799	24.959	NaN	2059.6	30	0	737.5	0.106				-1	PRTCLHAI	8	41	484.26100553260005	NaN	0	484.2607421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_PRTC(Carbamidomethyl (C))LHAI_	ENSG00000155561|ENST00000285968|NUP205;NUP205|p.F1204Lfs*34|1|0.12|ENSG00000155561|chr7:135617163-135617163|T/-|frameshift_variant;NUP205|p.Q1211Kfs*27|1|0.25|ENSG00000155561|chr7:135617188-135617188|C/-|frameshift_variant	23.036711822280957	1.7418937515398478	4				NaN	NaN	0	NaN	5847	2950	8794
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8800	24.961	NaN	4072.9	30	0	768.03	0.037				-1	VVCEYIVKK	9	64	569.3203410820175	1136.626129230835	2	569.3200073242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_VVC(Carbamidomethyl (C))EYIVKK_	EIF2S3|p.I441Nfs*4|1|0.29|ENSG00000130741|chrX:24073223-24073224|-/A|frameshift_variant;ENSG00000130741|ENST00000253039|EIF2S3;ENSG00000180574|ENST00000538173|EIF2S3B;nc|ENSG00000180574|Q2VIR3-2|EIF2S3B	34.172542307311794	0.4838870758800184	4				NaN	NaN	0	NaN	5848	2950	8794
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8801	24.962	NaN	3102.3	30	0	670.31	0.141	+			30725	QDKFQTMSD	9	55	550.2415600655202	NaN	0	550.2412109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QDKFQTMSD_	ENSG00000230989|ENST00000433866|HSBP1	19.1035232394073	0.3723251548669699	4				NaN	NaN	0	NaN	5849	2950	8794
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8819	25.001	NaN	11178	30	0	449.57	0.211				-1	CKEFWWFPHMW	11	85	827.3606427170718	1652.7067325009434	2	827.860107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_C(Carbamidomethyl (C))KEFWWFPHMW_	NDST2|p.R380C|1|0.53|ENSG00000166507|chr10:73806767-73806767|G/A|missense_variant	9.182911543092327	0.8274909109651483	4				NaN	NaN	0	NaN	5864	2953	8818
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8820	25.005	NaN	5558.6	30	0	687.82	0.106	+			39210	STADLIRCK	9	69	503.77112059927595	1005.5276882653519	2	503.77099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STADLIRCK_	ENSG00000001497|ENST00000374811|LAS1L;nc|ENSG00000001497|Q9Y4W2-2|LAS1L;nc|ENSG00000001497|Q9Y4W2-4|LAS1L	87.69643885390035	0.07135982304947239	4				NaN	NaN	0	NaN	5865	2953	8818
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8821	25.007	NaN	5006.7	30	0	783.31	0.106	+			21914	KRTEGNKSK	9	77	349.8693451419193	1046.586206025958	3	349.86944580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KRTEGNKSK_	ENSG00000164190|ENST00000282516|NIPBL;ENST00000504430.5_1_5:36961623-36995905:+|nuORF;nc|ENSG00000164190|Q6KC79-2|NIPBL;nc|ENSG00000164190|Q6KC79-3|NIPBL;NIPBL|p.F1423Lfs*15|1|0.43|ENSG00000164190|chr5:37008032-37008032|T/-|frameshift_variant;NIPBL|p.I2776Lfs*3|1|0.17|ENSG00000164190|chr5:37064797-37064797|A/-|frameshift_variant;NIPBL|p.L2220Ffs*3|1|0.21|ENSG00000164190|chr5:37048567-37048568|-/T|frameshift_variant	33.921630207806714	0.48623198279849766	4				NaN	NaN	0	NaN	5866	2953	8818
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8822	25.009	NaN	4181.3	30	0	569.36	0.106			+	21417	KMTARPGDR	9	72	516.272104619123	NaN	0	516.2720947265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KMTARPGDR_	REV__ENSG00000239713|ENST00000407997|APOBEC3G	56.72105179125745	0.16330365735109603	4				NaN	NaN	0	NaN	5867	2953	8818
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8823	25.01	NaN	4591.3	30	0	789.38	0.106			+	-1	PYHAMPQMM	9	61	569.2303113435677	1136.4460697539353	2	569.2305908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Oxidation (M)	_PYHAMPQM(Oxidation (M))M(Oxidation (M))_	REV__ATXN2L|p.Q1002Kfs*50|2|0.29|ENSG00000168488|chr16:28836029-28836029|G/-|frameshift_variant;REV__ENSG00000168488|ENST00000336783|ATXN2L;REV__ENST00000563314.5_1_16:28834580-28846939:+|nuORF;REV__nc|ENSG00000168488|Q8WWM7-2|ATXN2L;REV__nc|ENSG00000168488|Q8WWM7-3|ATXN2L;REV__nc|ENSG00000168488|Q8WWM7-4|ATXN2L;REV__nc|ENSG00000168488|Q8WWM7-5|ATXN2L;REV__nc|ENSG00000168488|Q8WWM7-6|ATXN2L;REV__nc|ENSG00000168488|Q8WWM7-8|ATXN2L;REV__nc|ENSG00000168488|Q8WWM7-9|ATXN2L	19.359975847455235	0.6112419832031293	4				NaN	NaN	0	NaN	5868	2953	8818
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8824	25.012	NaN	4790.3	30	0	697.52	0.034			+	33721	RPGPPGPSAE	10	67	482.7459973795738	963.4774418259476	2	482.74591064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RPGPPGPSAE_	REV__ENSG00000272333|ENST00000420124|KMT2B;REV__KMT2B|p.A1049Gfs*39|1|0.32|ENSG00000272333|chr19:35723812-35723813|-/G|frameshift_variant;REV__KMT2B|p.A2538Pfs*76|1|0.42|ENSG00000272333|chr19:35737693-35737693|G/-|frameshift_variant;REV__KMT2B|p.D1589Gfs*89|1|0.28|ENSG00000272333|chr19:35729058-35729059|-/G|frameshift_variant;REV__KMT2B|p.G1199Afs*156|1|0.16|ENSG00000272333|chr19:35725283-35725283|G/-|frameshift_variant;REV__KMT2B|p.G1879Vfs*16|5|0.4|ENSG00000272333|chr19:35732101-35732101|G/-|frameshift_variant;REV__KMT2B|p.G2123Vfs*30|1|0.34|ENSG00000272333|chr19:35732913-35732913|G/-|frameshift_variant;REV__KMT2B|p.L2136Pfs*17|1|0.27|ENSG00000272333|chr19:35732956-35732956|T/-|frameshift_variant;REV__KMT2B|p.P1201Rfs*154|1|0.37|ENSG00000272333|chr19:35725288-35725288|C/-|frameshift_variant;REV__KMT2B|p.P1821Hfs*74|1|0.36|ENSG00000272333|chr19:35731927-35731927|C/-|frameshift_variant;REV__KMT2B|p.R1055Gfs*127|1|0.46|ENSG00000272333|chr19:35723827-35723827|G/-|frameshift_variant;REV__KMT2B|p.R1911Dfs*23|1|0.18|ENSG00000272333|chr19:35732274-35732274|C/-|frameshift_variant	60.11826168202944	0.36476464221954025	4				NaN	NaN	0	NaN	5869	2953	8818
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8825	25.013	NaN	4249.8	30	0	521.12	0.142	+			5992	AVLTHSGFPAK	11	71	564.3140743986221	1126.613595864044	2	564.3138427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AVLTHSGFPAK_	ENSG00000181029|ENST00000596148|TRAPPC5	51.52775601994872	0.4002081502334604	4				NaN	NaN	0	NaN	5870	2953	8818
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8843	25.049	NaN	10746	30	0	3631.7	0.214				-1	 	0	99	328.70918203111313	655.4038111290263	2	328.7093811035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5885	2956	8842
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8844	25.053	NaN	4397.7	30	0	1094.4	0.106	+			14057	GSIGGTFAK	9	71	419.2264863996368	836.4384198660737	2	419.2265319824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSIGGTFAK_	ENSG00000137992|ENST00000370132|DBT	98.62937762414208	0.04060045538121712	4				NaN	NaN	0	NaN	5886	2956	8842
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8845	25.055	NaN	10968	30	0	1585.9	0.106	+			31781	QPIRVKKY	8	76	516.3223381309236	1030.6301233286472	2	516.3233032226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QPIRVKKY_	ENSG00000070669|ENST00000394308|ASNS;ENST00000495255.1_1_7:97493514-97498468:-|nuORF;nc|ENSG00000070669|P08243-2|ASNS	40.5726180659479	0.6527593143185008	4				NaN	NaN	0	NaN	5887	2956	8842
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8846	25.057	NaN	9226.9	30	0	1117	0.106				-1	 	0	77	671.3788767889853	1340.7432006447705	2	671.377685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5888	2956	8842
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8847	25.059	NaN	5631.5	30	0	2472.7	0.106			+	-1	CSLGRPLPA	9	61	485.7613164033228	969.5080798734456	2	485.7608947753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_C(Carbamidomethyl (C))SLGRPLPA_	REV__ENST00000355083.9_1_3:52931309-52931540:-|nuORF	29.14955571784316	0.5308295550522326	4				NaN	NaN	0	NaN	5889	2956	8842
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8848	25.061	NaN	8305.6	30	0	1077.9	0.035	+			5107	ATSPIIIHR	9	72	504.3034951984169	1006.5924374636338	2	504.303466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATSPIIIHR_	ENSG00000135336|ENST00000392844|ORC3;nc|ENSG00000135336|Q9UBD5-2|ORC3;nc|ENSG00000135336|Q9UBD5-3|ORC3	62.107414245175825	0.1960472003779324	4				NaN	NaN	0	NaN	5890	2956	8842
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8849	25.061	NaN	5950.5	30	0	896.39	0.141	+			1820	AIFTKAYQR	9	67	549.3090345551839	1096.6035161771676	2	549.3092041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AIFTKAYQR_	ENSG00000116062|ENST00000234420|MSH6;MSH6|p.F882Lfs*24|1|0.31|ENSG00000116062|chr2:47800626-47800626|T/-|frameshift_variant;MSH6|p.G1105Wfs*3|2|0.25|ENSG00000116062|chr2:47803552-47803553|-/T|frameshift_variant;nc|ENSG00000116062|P52701-2|MSH6;nc|ENSG00000116062|P52701-3|MSH6;nc|ENSG00000116062|P52701-4|MSH6	77.31757898189308	0.1091473830098891	4				NaN	NaN	0	NaN	5891	2956	8842
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8867	25.099	NaN	22507	30	0	4314	0.214	+			14859	GTLMWHQMK	9	79	574.2729559670454	1146.5313590008907	2	574.273193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_GTLMWHQM(Oxidation (M))K_	ENST00000346169.6_1_3:184032401-184033585:+|nuORF;ENST00000352767.7_2_3:184032446-184033585:+|nuORF	122.1759843771914	0.019882474861609503	4				NaN	NaN	0	NaN	5906	2959	8866
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8868	25.103	NaN	12542	30	0	1209.8	0.106	+			31539	QLLHNDEY	8	77	516.243579113762	1030.472605294324	2	516.2432861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QLLHNDEY_	ENSG00000168883|ENST00000323701|USP39;ENST00000459775.5_1_2:85848673-85875928:+|nuORF;ENST00000493829.5_1_2:85843459-85872221:+|nuORF;nc|ENSG00000168883|Q53GS9-2|USP39;nc|ENSG00000168883|Q53GS9-3|USP39	65.80317337860623	0.44433089765398776	4				NaN	NaN	0	NaN	5907	2959	8866
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8869	25.105	NaN	4392.8	30	0	501.78	0.106	+			40176	STQSLSLQR	9	66	510.27803731263725	1018.5415216920745	2	510.2777404785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STQSLSLQR_	ENSG00000187479|ENST00000617612|C11orf96;nc|nan|Q7Z7L8|C11orf96	72.87924865735499	0.12833875048249987	4				NaN	NaN	0	NaN	5908	2959	8866
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8870	25.107	NaN	5029.3	30	0	517.64	0.106			+	17930	IGKVDVSPNPL	11	84	380.22006569151637	1137.6383676747491	3	380.2202453613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IGKVDVSPNPL_	REV__ATP13A3|p.F1107Lfs*5|1|0.42|ENSG00000133657|chr3:194419960-194419960|A/-|frameshift_variant;REV__ATP13A3|p.I476Sfs*11|1|0.19|ENSG00000133657|chr3:194446998-194446998|T/-|frameshift_variant;REV__ATP13A3|p.L1114Ffs*17|1|0.25|ENSG00000133657|chr3:194419939-194419940|-/A|frameshift_variant;REV__ATP13A3|p.L1114Yfs*22|1|0.23|ENSG00000133657|chr3:194419940-194419940|A/-|frameshift_variant;REV__ATP13A3|p.P1198Lfs*19|1|0.04|ENSG00000133657|chr3:194406007-194406008|-/ATATAGTA|frameshift_variant;REV__ATP13A3|p.S1110Ffs*21|2|0.22|ENSG00000133657|chr3:194419952-194419953|-/A|frameshift_variant;REV__ATP13A3|p.V1108Cfs*23|1|0.26|ENSG00000133657|chr3:194419959-194419960|-/A|frameshift_variant;REV__ENSG00000133657|ENST00000645319|ATP13A3;REV__nc|ENSG00000133657|Q9H7F0-2|ATP13A3;REV__nc|ENSG00000133657|Q9H7F0|ATP13A3	38.714083909724	0.5755383074156426	4				NaN	NaN	0	NaN	5909	2959	8866
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8871	25.109	NaN	17831	30	0	1177.5	0.106				-1	LKRMWYEDPFH	11	88	769.3671011179948	1536.7196493027895	2	769.86669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_LKRM(Oxidation (M))WYEDPFH_	ENST00000477892.5_1_3:122128703-122128778:+|nuORF	37.81151784470057	0.5878881669006212	4				NaN	NaN	0	NaN	5910	2959	8866
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8872	25.111	NaN	5514.6	30	0	522.77	0.035			+	23537	LAIVHGDVLA	10	101	336.53427741623517	NaN	0	336.5339050292969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LAIVHGDVLA_	REV__ENST00000373465.2_1_X:46278845-46279157:-|nuORF	24.20275056022122	0.4201028297492154	4				NaN	NaN	0	NaN	5911	2959	8866
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8873	25.111	NaN	5812.2	30	0	595.06	0.136				-1	 	0	99	346.6840327193779	691.3535125055558	2	346.6841735839844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5912	2959	8866
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8891	25.148	NaN	14359	30	0	3037.6	0.214	+			15644	GVLGSSKVLAK	11	80	529.8321871164275	1057.6498212996548	2	529.8323364257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVLGSSKVLAK_	ENSG00000160216|ENST00000291572|AGPAT3;nc|ENSG00000160216|Q9NRZ7-2|AGPAT3;nc|ENSG00000160216|Q9NRZ7-3|AGPAT3	147.28045952906635	7.504075087960879E-05	4				NaN	NaN	0	NaN	5927	2962	8890
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8892	25.152	NaN	20993	30	0	3487.2	0.106	+			33964	RSDTPLIYK	9	84	364.87408916692294	1091.6004381009689	3	364.87396240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RSDTPLIYK_	ENSG00000196305|ENST00000443024|IARS1	49.536043120802724	0.308405419312776	4				NaN	NaN	0	NaN	5928	2962	8890
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8893	25.154	NaN	9996.3	30	0	1221.4	0.106			+	20744	KGVEVQLVPDQ	11	81	627.3407628397475	1252.666972746295	2	627.3403930664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))KGVEVQLVPDQ_	REV__BBS9|p.R75Q|1|0.11|ENSG00000122507|chr7:33152812-33152812|G/A|missense_variant	53.08895987439943	0.38514566451266113	4				NaN	NaN	0	NaN	5929	2962	8890
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8894	25.156	NaN	5364.8	30	0	520.35	0.106	+			32337	QTVKVINQY	9	71	546.8057546103379	1091.5969562874757	2	546.8059692382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QTVKVINQY_	ENSG00000103194|ENST00000219473|USP10;ENST00000548656.2_1_14:19411434-19411701:-|nuORF;nc|ENSG00000103194|Q14694-2|USP10;nc|ENSG00000103194|Q14694-3|USP10	58.78195531508484	0.22376836668196862	4				NaN	NaN	0	NaN	5930	2962	8890
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8895	25.158	NaN	5169	30	0	718.48	0.106				-1	YEKQICDKL	9	80	399.537357423887	1195.590242871861	3	399.53759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_YEKQIC(Carbamidomethyl (C))DKL_	ENSG00000164134|ENST00000296543|NAA15;ENSG00000172766|ENST00000379406|NAA16;ENST00000476980.5_1_13:41885589-41929305:+|nuORF;NAA15|p.N614Mfs*22|1|0.12|ENSG00000164134|chr4:139370291-139370291|A/-|frameshift_variant;NAA16|p.R628Ifs*4|1|0.06|ENSG00000172766|chr13:41369218-41369219|-/TTCT|frameshift_variant;nc|ENSG00000164134|Q9BXJ9-4|NAA15;nc|ENSG00000172766|Q6N069-2|NAA16;nc|ENSG00000172766|Q6N069-3|NAA16;nc|ENSG00000172766|Q6N069-4|NAA16;nc|ENSG00000172766|Q6N069-5|NAA16	65.15724298150197	0.17062369902793603	4				NaN	NaN	0	NaN	5931	2962	8890
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8896	25.159	NaN	5470.2	30	0	541.16	0.106	+			45284	TVRARLWL	8	90	338.877781283912	1013.611514451936	3	338.8778381347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TVRARLWL_	HERC1|p.R4402W|1|0.33|ENSG00000103657|chr15:63626056-63626056|G/A|missense_variant	30.503639358989545	0.7238069182250283	4				NaN	NaN	0	NaN	5932	2962	8890
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8897	25.161	NaN	4898.5	30	0	559.22	0.036	+			7910	DSEADRPKGL	10	65	544.2738793851588	1086.5332058371175	2	544.2754516601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DSEADRPKGL_	ENSG00000186462|ENST00000373517|NAP1L2;NAP1L2|p.Y327Vfs*6|1|0.04|ENSG00000186462|chrX:73213514-73213515|-/C|frameshift_variant	37.81151784470057	0.569310847604193	4				NaN	NaN	0	NaN	5933	2962	8890
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8915	25.199	NaN	8570.7	30	0	1931	0.214			+	47763	VSGRSAWPLA	10	102	348.5257487758719	1042.5554169278157	3	348.5259704589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSGRSAWPLA_	REV__QPCT|p.V29Sfs*20|1|0.34|ENSG00000115828|chr2:37344811-37344811|G/-|frameshift_variant	26.69291269510374	0.6618461711292317	4				NaN	NaN	0	NaN	5948	2965	8914
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8916	25.202	NaN	5226.5	30	0	536.26	0.106			+	37664	SLRAPQPVV	9	115	322.86233590216614	965.5651783066985	3	322.86248779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLRAPQPVV_	REV__ENST00000497857.5_1_2:218899814-218900102:+|nuORF	31.529811441608018	0.5085848003137583	4				NaN	NaN	0	NaN	5949	2965	8914
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8917	25.204	NaN	10516	30	0	1299.1	0.106	+			40503	STYLGIHER	9	79	538.2801020626089	1074.5456511920177	2	538.2802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STYLGIHER_	ENSG00000277462|ENST00000366503|ZNF670	63.53385203322761	0.18415635464017938	4				NaN	NaN	0	NaN	5950	2965	8914
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8918	25.206	NaN	4009.9	30	0	428.6	0.106			+	-1	FDCVSGTKT	9	58	507.7329303963352	1013.4513078594704	2	507.73321533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_FDC(Carbamidomethyl (C))VSGTKT_	REV__ENSG00000146426|ENST00000682666|TIAM2;REV__nc|ENSG00000146426|Q8IVF5-2|TIAM2;REV__nc|ENSG00000146426|Q8IVF5-4|TIAM2;REV__nc|ENSG00000146426|Q8IVF5-5|TIAM2	37.81151784470057	0.4459294069877048	4				NaN	NaN	0	NaN	5951	2965	8914
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8919	25.208	NaN	4481.9	30	0	717.4	0.106	+			15304	GTVDPQELQK	10	70	557.7910140687254	1113.5674752042507	2	557.7911376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTVDPQELQK_	ENSG00000075142|ENST00000265729|SRI;ENST00000472930.6_1_7:87835795-87839460:-|nuORF;ENST00000486860.5_1_7:87838471-87849341:-|nuORF;nc|ENSG00000075142|P30626-2|SRI;nc|ENSG00000075142|P30626-3|SRI	78.26377905018397	0.20980573808910843	4				NaN	NaN	0	NaN	5952	2965	8914
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8920	25.21	NaN	2222.1	30	0	385.55	0.035				-1	 	0	68	334.1858360748063	333.1785596082063	1	334.1858825683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	5953	2965	8914
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8921	25.21	NaN	3741.4	30	0	661.95	0.141			+	36756	SHIKMNKGL	9	73	343.19492673203115	1026.5629507962935	3	343.1833190917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SHIKMNKGL_	REV__ENSG00000138646|ENST00000264350|HERC5;REV__HERC5|p.L430*|1|0.4|ENSG00000138646|chr4:88470659-88470659|T/-|frameshift_variant	24.519189625965996	0.574102787014149	4				NaN	NaN	0	NaN	5954	2965	8914
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8939	25.25	NaN	4862.9	30	0	718.48	0.214	+			3388	ASQCGSLIGK	10	66	482.25189811674505	962.4892433002901	2	482.25	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASQCGSLIGK_	ENSG00000090097|ENST00000461554|PCBP4;ENSG00000183570|ENST00000681687|PCBP3;ENSG00000197111|ENST00000546463|PCBP2;ENST00000468429.5_1_21:47321003-47359956:+|nuORF;ENST00000492809.5_1_3:51992079-51994784:-|nuORF;ENST00000497390.5_1_3:51992079-51994784:-|nuORF;ENST00000547717.1_1_12:53848575-53861193:+|nuORF;ENST00000548190.1_1_12:53849722-53854210:+|nuORF;nc|ENSG00000090097|P57723-2|PCBP4;nc|ENSG00000183570|P57721-2|PCBP3;nc|ENSG00000183570|P57721-3|PCBP3;nc|ENSG00000183570|P57721-4|PCBP3;nc|ENSG00000183570|P57721-5|PCBP3;nc|ENSG00000197111|Q15366-2|PCBP2;nc|ENSG00000197111|Q15366-4|PCBP2;nc|ENSG00000197111|Q15366-5|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;nc|ENSG00000197111|Q15366-7|PCBP2;nc|ENSG00000197111|Q15366-8|PCBP2;nc|ENSG00000197111|Q15366|PCBP2;PCBP2|p.T202Kfs*26|1|0.32|ENSG00000197111|chr12:53464773-53464773|C/-|frameshift_variant;PCBP4|p.G203Efs*11|1|0.1|ENSG00000090097|chr3:51959397-51959398|-/CTCT|frameshift_variant	77.28774426308219	0.21777985819004636	4				NaN	NaN	0	NaN	5969	2968	8938
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8940	25.253	NaN	4939.4	30	0	565.62	0.106			+	13422	GLGLGWSRR	9	68	501.28482670036584	NaN	0	501.2849426269531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GLGLGWSRR_	REV__ENST00000545748.5_1_12:52431545-52431905:+|nuORF	60.97194046774394	0.14517358171632622	4				NaN	NaN	0	NaN	5970	2968	8938
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8941	25.255	NaN	3988.8	30	0	709.59	0.106			+	37869	SNRVVLGDL	9	72	486.77737622232354	971.5401995114471	2	486.7773742675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SNRVVLGDL_	REV__nc|ENSG00000105371|Q14773-2|ICAM4;REV__nc|ENSG00000105371|Q14773|ICAM4	42.396135135203025	0.392153681582562	4				NaN	NaN	0	NaN	5971	2968	8938
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8942	25.257	NaN	4091.6	30	0	629.66	0.106	+			33956	RSCAQARAGR	10	65	538.2801020626089	1074.5456511920177	2	538.2802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RSCAQARAGR_	ENST00000412051.5_2_7:1040118-1067924:-|nuORF;ENST00000444428.5_3_7:1040118-1094922:-|nuORF	31.529811441608018	0.6223461015008678	4				NaN	NaN	0	NaN	5972	2968	8938
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8943	25.259	NaN	6310.3	30	0	832	0.106	+			20022	KEINTNQEAL	10	72	580.3018530841777	1158.5891532351552	2	580.3015747070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEINTNQEAL_	ENSG00000033627|ENST00000343619|ATP6V0A1;ENST00000588629.1_1_17:40610935-40622311:+|nuORF;nc|ENSG00000033627|Q93050-1|ATP6V0A1;nc|ENSG00000033627|Q93050-3|ATP6V0A1	58.2462437865262	0.38179041844353556	4				NaN	NaN	0	NaN	5973	2968	8938
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8944	25.261	NaN	4248.8	30	0	515.13	0.036	+			47379	VPHTNPPEY	9	69	527.253732204185	1052.4929114751699	2	527.2539672851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VPHTNPPEY_	ENSG00000177383|ENST00000317897|MAGEF1	87.69643885390035	0.07135982304947239	4				NaN	NaN	0	NaN	5974	2968	8938
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8945	25.261	NaN	4243.2	30	0	706.83	0.141	+			28356	NEKNFERAL	9	64	560.7920010895762	NaN	0	560.7916259765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NEKNFERAL_	ENSG00000139324|ENST00000266712|TMTC3;nc|ENSG00000139324|Q6ZXV5|TMTC3;TMTC3|p.C759Mfs*3|1|0.29|ENSG00000139324|chr12:88195171-88195172|-/A|frameshift_variant;TMTC3|p.K758Nfs*31|1|0.16|ENSG00000139324|chr12:88195172-88195172|A/-|frameshift_variant	37.50817390946774	0.28819615062043347	4				NaN	NaN	0	NaN	5975	2968	8938
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8963	25.301	NaN	58167	30	0	9068.5	0.214	+			41131	SVITIVKSK	9	94	487.8159995055281	973.6174460778562	2	487.81561279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVITIVKSK_	ENSG00000197063|ENST00000357736|MAFG	181.4070731898895	0.0011547877412507563	4				NaN	NaN	0	NaN	5990	2971	8962
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8964	25.304	NaN	32153	30	0	13803	0.106	+			41132	SVITIVKSK	9	97	325.5461298610368	973.6165601833104	3	325.5462341308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVITIVKSK_	ENSG00000197063|ENST00000357736|MAFG	62.107414245175825	0.1960472003779324	4				NaN	NaN	0	NaN	5991	2971	8962
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8965	25.306	NaN	11976	30	0	1266.5	0.106	+			43183	TETTKFEKL	9	76	548.7981778085755	1095.5818026839509	2	548.7982177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TETTKFEKL_	CC2D1A|p.G898Vfs*45|1|0.32|ENSG00000132024|chr19:13929638-13929638|G/-|frameshift_variant;ENSG00000132024|ENST00000318003|CC2D1A;ENST00000589138.5_1_19:14029331-14037891:+|nuORF;ENST00000589224.1_1_19:14034393-14038165:+|nuORF;nc|ENSG00000132024|Q6P1N0-2|CC2D1A	106.68306549817024	0.032382560583716295	4				NaN	NaN	0	NaN	5992	2971	8962
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8966	25.308	NaN	11665	30	0	2200.6	0.106	+			18321	IPTKQTQTF	9	75	532.2928504744916	1062.5711480157831	2	532.2929077148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IPTKQTQTF_	ENSG00000109971|ENST00000534624|HSPA8;ENSG00000126803|ENST00000247207|HSPA2;ENSG00000173110|ENST00000309758|HSPA6;ENST00000397642.3_1_1:247394123-247394771:+|nuORF;ENST00000425843.1_1_X:120337248-120337797:-|nuORF;ENST00000445535.1_1_1:161576981-161578004:+|nuORF;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;ENST00000552265.2_1_12:111822376-111823062:+|nuORF;HSPA6|p.D632Gfs*9|1|0.12|ENSG00000173110|chr1:161526547-161526548|-/G|frameshift_variant;HSPA8|p.K569Dfs*6|1|0.3|ENSG00000109971|chr11:123058302-123058303|TC/-|frameshift_variant;nc|ENSG00000109971|P11142-2|HSPA8	138.06239232086	0.011389075116295402	4				NaN	NaN	0	NaN	5993	2971	8962
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8967	25.31	NaN	20227	30	0	5828.9	0.106	+			23246	KYIHSANVL	9	74	522.7957805375863	1043.5770081419726	2	522.7957153320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KYIHSANVL_	ENSG00000069956|ENST00000261845|MAPK6;ENSG00000100030|ENST00000215832|MAPK1;ENSG00000102882|ENST00000263025|MAPK3;ENSG00000141639|ENST00000400384|MAPK4;ENST00000478356.5_2_16:30128576-30134273:-|nuORF;ENST00000483869.1_1_16:30129346-30134419:-|nuORF;MAPK6|p.P206*|1|0.03|ENSG00000069956|chr15:52050053-52050054|CC/-|frameshift_variant;nc|ENSG00000100030|P28482-2|MAPK1;nc|ENSG00000102882|P27361-2|MAPK3;nc|ENSG00000102882|P27361-3|MAPK3	83.6470233535746	0.08277643980271215	4				NaN	NaN	0	NaN	5994	2971	8962
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8968	25.312	NaN	19328	30	0	8925.3	0.036			+	33300	RGQLFDPLV	9	80	348.86573682584003	1043.57538107772	3	348.8659362792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RGQLFDPLV_	REV__ENSG00000163702|ENST00000403601|IL17RC;REV__ENST00000451271.5_1_3:9958923-9975274:+|nuORF;REV__ENST00000466046.5_1_3:9965750-9975274:+|nuORF;REV__ENST00000483582.5_1_3:9974542-9975274:+|nuORF;REV__ENST00000494365.5_1_3:9965750-9975274:+|nuORF;REV__ENST00000497387.5_1_3:9971427-9975274:+|nuORF;REV__nc|ENSG00000288550|Q8NAC3-3|IL17RC;REV__nc|ENSG00000288550|Q8NAC3-5|IL17RC;REV__nc|ENSG00000288550|Q8NAC3-6|IL17RC;REV__nc|ENSG00000288550|Q8NAC3-7|IL17RC;REV__nc|ENSG00000288550|Q8NAC3-8|IL17RC;REV__nc|ENSG00000288550|Q8NAC3|IL17RC	30.503639358989545	0.5181749237905803	4				NaN	NaN	0	NaN	5995	2971	8962
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8969	25.312	NaN	6729.1	30	0	1151.1	0.139	+			2391	ANSLPHFK	8	64	457.2482609849215	912.481969036643	2	457.248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ANSLPHFK_	ENSG00000054654|ENST00000555002|SYNE2;ENST00000557005.1_1_14:64469755-64489638:+|nuORF;nc|ENSG00000054654|Q8WXH0|SYNE2;SYNE2|p.A5240Qfs*5|1|0.07|ENSG00000054654|chr14:64152639-64152639|G/-|frameshift_variant;SYNE2|p.D3074Ffs*8|1|0.07|ENSG00000054654|chr14:64053132-64053133|-/TTTCTTTTTCAAATACTTG|frameshift_variant;SYNE2|p.F2563Ifs*28|1|0.34|ENSG00000054654|chr14:64051593-64051594|-/A|frameshift_variant;SYNE2|p.F2840Lfs*3|1|0.38|ENSG00000054654|chr14:64052427-64052427|T/-|frameshift_variant;SYNE2|p.F4992Lfs*13|1|0.39|ENSG00000054654|chr14:64140067-64140067|T/-|frameshift_variant;SYNE2|p.L5308Ifs*18|1|0.12|ENSG00000054654|chr14:64158750-64158751|GG/-|frameshift_variant;SYNE2|p.M1669Wfs*6|1|0.36|ENSG00000054654|chr14:64017707-64017707|A/-|frameshift_variant;SYNE2|p.N1656Mfs*19|1|0.18|ENSG00000054654|chr14:64017669-64017669|A/-|frameshift_variant;SYNE2|p.S1830Kfs*9|1|0.34|ENSG00000054654|chr14:64021985-64021986|-/A|frameshift_variant;SYNE2|p.S6651Rfs*83|1|0.29|ENSG00000054654|chr14:64220596-64220597|-/G|frameshift_variant	38.80614096846853	0.6637206697844082	4				NaN	NaN	0	NaN	5996	2971	8962
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8987	25.352	NaN	16542	30	0	2357.5	0.214	+			21326	KLTSKFFPG	9	76	512.7952205007921	1023.5758880683842	2	512.7947998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KLTSKFFPG_	ENST00000457388.1_1_10:37626656-37627235:+|nuORF	58.78195531508484	0.22376836668196862	4				NaN	NaN	0	NaN	6011	2974	8986
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8988	25.355	NaN	8575.1	30	0	919.23	0.106	+			41298	SVLNIAREK	9	75	515.3066568816652	1028.5987608301302	2	515.3065185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVLNIAREK_	ANKRD36C|p.F1404Lfs*4|1|0.33|ENSG00000174501|chr2:95856049-95856049|A/-|frameshift_variant;ANKRD36C|p.F1404Lfs*4|1|0.33|ENSG00000174501|chr2:95856049-95856049|A/-|frameshift_variant;ANKRD36C|p.F1404Lfs*4|1|0.33|ENSG00000174501|chr2:95856049-95856049|A/-|frameshift_variant;ENSG00000174501|ENST00000295246|ANKRD36C;ENSG00000174501|ENST00000295246|ANKRD36C;ENSG00000174501|ENST00000295246|ANKRD36C;ENSG00000196912|ENST00000359901|ANKRD36B;ENST00000534304.5_1_2:96525807-96601268:-|nuORF;nc|ENSG00000174501|Q5JPF3-3|ANKRD36C;nc|ENSG00000174501|Q5JPF3|ANKRD36C;nc|ENSG00000196912|Q8N2N9-2|ANKRD36B;nc|ENSG00000196912|Q8N2N9-3|ANKRD36B	112.10723106719422	0.02684780151337622	4				NaN	NaN	0	NaN	6012	2974	8986
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8989	25.357	NaN	4783.9	30	0	538.83	0.106	+			47919	VSLSFQSRK	9	65	526.2984452722541	1050.582337611308	2	526.298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSLSFQSRK_	ENST00000587838.1_1_17:74554648-74557410:+|nuORF;ENST00000591956.1_1_17:74553872-74557410:+|nuORF	56.43379154798735	0.2433427591689151	4				NaN	NaN	0	NaN	6013	2974	8986
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8990	25.359	NaN	5417.2	30	0	857.18	0.106	+			4064	ATDIVTGLKQK	11	71	587.345603092961	1172.676653252722	2	587.3453979492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATDIVTGLKQK_	ENSG00000007952|ENST00000372966|NOX1;nc|ENSG00000007952|Q9Y5S8-3|NOX1	63.42647028704847	0.292869158926425	4				NaN	NaN	0	NaN	6014	2974	8986
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8991	25.361	NaN	7786.6	30	0	2479	0.106			+	29247	NWVIEMFLPA	10	58	610.3143346933427	1218.6141164534854	2	610.3154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NWVIEMFLPA_	REV__ENST00000572135.5_1_17:1488956-1531469:-|nuORF;REV__nc|ENSG00000167703|Q8N370-2|SLC43A2	28.081489160057373	0.6505064946289502	4				NaN	NaN	0	NaN	6015	2974	8986
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8992	25.363	NaN	4268.3	30	0	809.52	0.036			+	13454	GLIRTPYGCC	10	67	541.7596221215251	1081.5046913098502	2	541.7601318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GLIRTPYGCC_	REV__PIEZO1|p.R2082C|1|0.39|ENSG00000103335|chr16:88719881-88719881|G/A|missense_variant	27.882242232435846	0.6521336255503853	4				NaN	NaN	0	NaN	6016	2974	8986
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	8993	25.363	NaN	4439	30	0	990.7	0.142			+	11878	FTISHHTSLL	10	66	578.309814453125	NaN	0	578.309814453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FTISHHTSLL_	REV__ENSG00000176231|ENST00000322107|OR10H4	51.52775601994872	0.29594378441454594	4				NaN	NaN	0	NaN	6017	2974	8986
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9011	25.403	NaN	14149	30	0	6006.7	0.214			+	26316	LSVSRPVDT	9	71	487.26947250396205	972.5243920747241	2	487.2691650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSVSRPVDT_	REV__ENST00000586719.5_1_19:12885462-12889216:-|nuORF;REV__ENST00000589965.5_1_19:12885462-12886240:-|nuORF;REV__ENST00000590839.5_1_19:12885462-12889138:-|nuORF;REV__ENST00000592079.5_1_19:12883046-12889216:-|nuORF	60.11826168202944	0.21262886028301267	4				NaN	NaN	0	NaN	6032	2977	9010
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9012	25.406	NaN	3971.5	30	0	407	0.106	+			17300	IADPSSKTL	9	53	466.2588886777043	930.5032244222086	2	466.2583312988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IADPSSKTL_	COL12A1|p.G2777Wfs*37|1|0.15|ENSG00000111799|chr6:75102684-75102685|-/G|frameshift_variant;COL12A1|p.G3027Wfs*19|1|0.1|ENSG00000111799|chr6:75087680-75087681|-/G|frameshift_variant;ENSG00000111799|ENST00000322507|COL12A1;nc|ENSG00000111799|Q99715-2|COL12A1;nc|ENSG00000111799|Q99715-4|COL12A1	63.53385203322761	0.18415635464017938	4				NaN	NaN	0	NaN	6033	2977	9010
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9013	25.408	NaN	3746.3	30	0	967.87	0.106				-1	TCMCCMFMD	9	65	391.7793269133196	NaN	0	391.76165771484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),2 Oxidation (M)	_TC(Carbamidomethyl (C))MCCM(Oxidation (M))FM(Oxidation (M))D_	ENSG00000183826|ENST00000481247|BTBD9;nc|ENSG00000183826|Q96Q07-2|BTBD9;nc|ENSG00000183826|Q96Q07-3|BTBD9	14.137123925751023	0.3891339986947948	4				NaN	NaN	0	NaN	6034	2977	9010
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9014	25.41	NaN	3068	30	0	347.82	0.106			+	-1	TCIDRVNVI	9	71	363.86142873352696	1088.5624568007809	3	363.8612365722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_TC(Carbamidomethyl (C))IDRVNVI_	REV__PASD1|p.N139Tfs*3|1|0.05|ENSG00000166049|chrX:151621589-151621590|-/CTTT|frameshift_variant	27.882242232435846	0.5426732730940306	4				NaN	NaN	0	NaN	6035	2977	9010
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9015	25.412	NaN	3741.2	30	0	701.47	0.106	+			7663	DKYKVIEIK	9	47	568.3403982144652	1134.6662434957302	2	568.2820434570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DKYKVIEIK_	tr|U7SQP2|U7SQP2_FUSNUGlycosyltransferase2-likedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01646PE=4SV=1	24.231819034082204	0.5767884179199719	4				NaN	NaN	0	NaN	6036	2977	9010
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9016	25.414	NaN	4194.7	30	0	1205.3	0.035			+	-1	PQLMGEDAL	9	49	495.235084969643	NaN	0	495.2351379394531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_PQLM(Oxidation (M))GEDAL_	REV__TRPM6|p.R340Q|1|0.25|ENSG00000119121|chr9:74820419-74820419|C/T|missense_variant	20.94693142431847	0.3660861156085067	4				NaN	NaN	0	NaN	6037	2977	9010
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9017	25.414	NaN	3112.7	30	0	400.95	0.138				-1	 	0	70	384.77192393383325	767.5292949344665	2	384.7718200683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6038	2977	9010
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9035	25.452	NaN	5620.1	30	0	639.53	0.214	+			38887	SSNVVHLIK	9	66	498.79559326171875	NaN	0	498.79559326171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSNVVHLIK_	ENSG00000160255|ENST00000652462|ITGB2	85.86182877749512	0.05129763505578642	4				NaN	NaN	0	NaN	6053	2980	9034
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9036	25.456	NaN	8399.9	30	0	3258.5	0.106			+	31967	QQVHAAKNVTF	11	74	414.8898324574534	NaN	0	414.5555725097656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QQVHAAKNVTF_	REV__ENSG00000198722|ENST00000635942|UNC13B;REV__nc|ENSG00000198722|O14795-2|UNC13B;REV__nc|ENSG00000198722|O14795|UNC13B	36.31764250033197	0.4035636655321173	4				NaN	NaN	0	NaN	6054	2980	9034
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9037	25.458	NaN	3335.5	30	0	573.89	0.106				-1	 	0	53	483.25497662362903	482.24770015702904	1	483.2558288574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6055	2980	9034
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9038	25.46	NaN	3153.1	30	0	618.65	0.106				-1	 	0	56	359.0284420225994	NaN	0	359.0285949707031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6056	2980	9034
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9039	25.461	NaN	6141.5	30	0	820.43	0.106			+	22124	KSNWRMVR	8	77	538.7948594964287	1075.5751660596572	2	538.7943725585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KSNWRMVR_	REV__ENSG00000153012|ENST00000382114|LGI2	55.50420428727701	0.5462892107279674	4				NaN	NaN	0	NaN	6057	2980	9034
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9040	25.463	NaN	7596.1	30	0	1388.4	0.04	+			21129	KKSKKNSRCWH	11	64	701.3832397460938	NaN	0	701.3832397460938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KKSKKNSRCWH_	L1PB1_dup5905|chr7:93807211-93809400:+|2.023350116566841|0.2056128638309657|3.3|382.0|45|2|sense	19.262678746197807	0.456735970842152	4				NaN	NaN	0	NaN	6058	2980	9034
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9041	25.464	NaN	4680.4	30	0	799.7	0.144				-1	GTLMWHQMK	9	68	574.2729559670454	1146.5313590008907	2	574.2734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_GTLMWHQM(Oxidation (M))K_	ENST00000346169.6_1_3:184032401-184033585:+|nuORF;ENST00000352767.7_2_3:184032446-184033585:+|nuORF	32.81241826257853	0.4965981579233955	4				NaN	NaN	0	NaN	6059	2980	9034
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9059	25.502	NaN	9441.7	30	0	1016.2	0.214	+			9335	EIKSKYLM	8	106	337.8555288987506	1010.5447572964518	3	337.85601806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EIKSKYLM_	tr|U7T681|U7T681_FUSNUHTHgntR-typedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00143PE=3SV=1	35.200714571348534	0.6875396545722289	4				NaN	NaN	0	NaN	6074	2983	9058
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9060	25.505	NaN	12846	30	0	2243.7	0.106	+			43600	TILEKFKEK	9	79	568.3403982144652	1134.6662434957302	2	568.34033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TILEKFKEK_	CKAP5|p.K1126Rfs*25|1|0.46|ENSG00000175216|chr11:46767609-46767609|T/-|frameshift_variant;CKAP5|p.V1971Lfs*42|1|0.03|ENSG00000175216|chr11:46744211-46744212|-/TTGAAAAAAAG|frameshift_variant;ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5	162.63603312974413	0.004023911058767669	4				NaN	NaN	0	NaN	6075	2983	9058
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9061	25.508	NaN	13567	30	0	1638.2	0.106			+	31392	QKIVNELHDLR	11	83	682.887298059048	1363.760043184896	2	682.8865966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QKIVNELHDLR_	REV__ENSG00000110328|ENST00000227756|GALNT18;REV__ENST00000526064.1_1_11:11497961-11643245:-|nuORF;REV__nc|ENSG00000110328|Q6P9A2-2|GALNT18	58.62960593111931	0.3356877741313683	4				NaN	NaN	0	NaN	6076	2983	9058
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9062	25.509	NaN	6261.3	30	0	409.73	0.037	+			50726	YEHPKDLKL	9	91	381.54472270612416	1141.6123387185726	3	381.5453186035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YEHPKDLKL_	ENSG00000147162|ENST00000373719|OGT;nc|ENSG00000147162|O15294-2|OGT;nc|ENSG00000147162|O15294-3|OGT;nc|ENSG00000147162|O15294-4|OGT	47.95952297671804	0.32689736945648856	4				NaN	NaN	0	NaN	6077	2983	9058
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9081	25.545	NaN	22071	30	0	7684	0.214			+	27988	MVSRMIDR	8	101	336.5087979975782	1006.5045645929347	3	336.509033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MVSRMIDR_	REV__DNAH7|p.I2732Lfs*15|1|0.34|ENSG00000118997|chr2:195857597-195857597|T/-|frameshift_variant;REV__DNAH7|p.P1564Tfs*5|1|0.25|ENSG00000118997|chr2:195895182-195895183|-/T|frameshift_variant;REV__DNAH7|p.P2310Tfs*50|1|0.14|ENSG00000118997|chr2:195864727-195864728|-/T|frameshift_variant;REV__DNAH7|p.S3691Afs*11|1|0.37|ENSG00000118997|chr2:195775977-195775977|T/-|frameshift_variant;REV__DNAH7|p.T2935Ifs*12|1|0.24|ENSG00000118997|chr2:195845142-195845143|AG/-|frameshift_variant;REV__ENSG00000118997|ENST00000312428|DNAH7	35.61828744233558	0.6843154725607303	4				NaN	NaN	0	NaN	6093	2986	9080
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9082	25.549	NaN	35371	30	0	14220	0.106	+			14950	GTMKAQGVLLK	11	88	382.56143127098204	1144.6624644131462	3	382.5616455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTMKAQGVLLK_	nc|ENSG00000166482|P55083-2|MFAP4	54.722347961057174	0.3705654281804646	4				NaN	NaN	0	NaN	6094	2986	9080
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9083	25.551	NaN	24863	30	0	1384.8	0.106			+	25402	LPKRHSEPVT	10	81	582.3305337450812	1162.6465145569623	2	582.3302612304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LPKRHSEPVT_	REV__CDR2|p.L296P|1|0.21|ENSG00000140743|chr16:22347443-22347443|A/G|missense_variant;REV__ENSG00000140743|ENST00000268383|CDR2	51.33545320467046	0.4446945571623749	4				NaN	NaN	0	NaN	6095	2986	9080
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9084	25.553	NaN	17643	30	0	1800	0.106			+	-1	LCILVMITI	9	95	364.5448692329734	1090.6127782991202	3	364.5450439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_LC(Carbamidomethyl (C))ILVM(Oxidation (M))ITI_	REV__ENSG00000185313|ENST00000449082|SCN10A;REV__SCN10A|p.F1805Lfs*8|1|0.1|ENSG00000185313|chr3:38697805-38697805|A/-|frameshift_variant	19.996771675451527	0.6112419832031292	4				NaN	NaN	0	NaN	6096	2986	9080
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9085	25.555	NaN	3837.1	30	0	355.78	0.106	+			3834	ATAISLMRK	9	71	495.79180908203125	NaN	0	495.79180908203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATAISLMRK_	ENSG00000196235|ENST00000432763|SUPT5H;ENST00000598459.5_1_19:39949480-39950711:+|nuORF;nc|ENSG00000196235|O00267-2|SUPT5H;SUPT5H|p.P800Hfs*154|1|0.21|ENSG00000196235|chr19:39473425-39473425|C/-|frameshift_variant	79.71258880314673	0.07236858429579222	4				NaN	NaN	0	NaN	6097	2986	9080
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9086	25.557	NaN	3252	30	0	420.01	0.035	+			44517	TSTIEQQLQ	9	60	524.2698611957749	NaN	0	524.2698974609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TSTIEQQLQ_	ENSG00000181817|ENST00000315732|LSM10;ENST00000476041.1_1_1:36859367-36863370:-|nuORF	45.97224482568171	0.23445038899310136	4				NaN	NaN	0	NaN	6098	2986	9080
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9087	25.557	NaN	7129.3	30	0	946.04	0.143	+			49440	VVVGVYRPPPK	11	76	605.8688059831526	1209.723059033105	2	605.8689575195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VVVGVYRPPPK_	ENSG00000105202|ENST00000221801|FBL	52.167168403610894	0.39337392184041037	4				NaN	NaN	0	NaN	6099	2986	9080
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9105	25.596	NaN	11065	30	0	2142.9	0.214	+			15213	GTSSMIVPK	9	61	460.2501250038766	918.4856970745532	2	460.24945068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTSSMIVPK_	ENSG00000166167|ENST00000370187|BTRC;nc|ENSG00000166167|Q9Y297-2|BTRC	62.107414245175825	0.1960472003779324	4				NaN	NaN	0	NaN	6114	2989	9104
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9106	25.599	NaN	6967.2	30	0	1000.6	0.106	+			33548	RLELPGPGK	9	75	483.79037148696176	965.5661900407235	2	483.7898864746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RLELPGPGK_	ENST00000422364.2_1_11:63993766-63994078:+|nuORF	51.52775601994872	0.28504342437107444	4				NaN	NaN	0	NaN	6115	2989	9104
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9107	25.602	NaN	12411	30	0	1948.1	0.106	+			32265	QTLPNAAYNNR	11	73	631.3180368024927	1260.6215206717852	2	631.31787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QTLPNAAYNNR_	ENSG00000102837|ENST00000219022|OLFM4	70.8162118820467	0.22893521292419713	4				NaN	NaN	0	NaN	6116	2989	9104
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9108	25.603	NaN	5470	30	0	1113.7	0.106			+	-1	TCQKDENVN	9	69	554.2406324970019	NaN	0	554.2401123046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_TC(Carbamidomethyl (C))QKDENVN_	REV__CCDC54|p.T212Nfs*13|1|0.27|ENSG00000138483|chr3:107378214-107378215|-/A|frameshift_variant;REV__ENSG00000138483|ENST00000261058|CCDC54	34.172542307311794	0.30503706118289736	4				NaN	NaN	0	NaN	6117	2989	9104
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9109	25.605	NaN	3740.2	30	0	354.18	0.106	+			29771	PHYVTLDGH	9	89	346.8380470938562	NaN	0	346.8380126953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PHYVTLDGH_	ENSG00000275395|ENST00000616721|FCGBP;ENSG00000275395|ENST00000616721|FCGBP;FCGBP-ACSS2|1|fusion;FCGBP-ACSS2|1|fusion;FCGBP|p.R2087Q|1|0.33|ENSG00000275395|chr19:39893107-39893107|C/T|missense_variant;nc|ENSG00000275395|Q9Y6R7|FCGBP;nc|ENSG00000275395|Q9Y6R7|FCGBP;nc|ENSG00000275395|Q9Y6R7|FCGBP	40.5726180659479	0.27166212580479165	4				NaN	NaN	0	NaN	6118	2989	9104
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9110	25.607	NaN	3551.1	30	0	339.76	0.036				-1	SMIKPMLVV	9	86	350.5293515420315	1048.5662252262946	3	350.5293884277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Oxidation (M)	_SM(Oxidation (M))IKPM(Oxidation (M))LVV_	ENST00000559746.1_1_15:39886533-39886581:+|nuORF	25.57405402267927	0.5642445186134241	4				NaN	NaN	0	NaN	6119	2989	9104
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9111	25.608	NaN	7544.3	30	0	945.82	0.141	+			47968	VSNSWPQVI	9	96	343.8501102459189	1028.5285013379569	3	343.8502197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VSNSWPQVI_	AluSz6_dup3545|chr1:206928950-206929263:+|2.41730061421725|0.0414716037207735|5.87|423.0|17|1|anti-sense;AluSz6_dup5069|chr2:47377230-47377536:-|1.0621030440935346|0.2745788286115291|1.95|483.0|17|1|anti-sense;ENSG00000106436|ENST00000223167|MYL10;ENST00000511909.5_1_4:122053805-122071269:-|nuORF;ENST00000601724.5_1_19:8478196-8486699:+|nuORF	39.252832667884924	0.4290233611298554	4				NaN	NaN	0	NaN	6120	2989	9104
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9129	25.646	NaN	11823	30	0	3118.1	0.214	+			48635	VTSLLKTVK	9	111	330.2179955277588	987.6321571834764	3	330.2181701660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTSLLKTVK_	ENSG00000137076|ENST00000314888|TLN1;ENSG00000171914|ENST00000636159|TLN2;nc|ENSG00000137076|Q9Y490-2|TLN1	40.05817265558897	0.419577045485086	4				NaN	NaN	0	NaN	6135	2992	9128
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9130	25.65	NaN	13174	30	0	2424.7	0.106	+			6961	CPNGGSLTHTY	11	81	603.7642784441251	1205.5140039550502	2	603.7648315429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_C(Carbamidomethyl (C))PNGGSLTHTY_	nc|ENSG00000198788|Q02817|MUC2	159.27591364854348	5.50659524778774E-05	4				NaN	NaN	0	NaN	6136	2992	9128
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9131	25.652	NaN	5982.2	30	0	635.09	0.106	+			45001	TVEDVIVRK	9	68	529.8140454909454	1057.6135380486908	2	529.8145141601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVEDVIVRK_	BRD8|p.G620Wfs*10|1|0.17|ENSG00000112983|chr5:138164101-138164102|-/A|frameshift_variant;BRD8|p.P1065Lfs*29|1|0.14|ENSG00000112983|chr5:138149724-138149724|G/-|frameshift_variant;ENSG00000112983|ENST00000254900|BRD8;ENST00000515254.1_1_5:137506426-137514303:-|nuORF;nc|ENSG00000112983|Q9H0E9-2|BRD8;nc|ENSG00000112983|Q9H0E9-4|BRD8	113.41158876095287	0.025516849225023126	4				NaN	NaN	0	NaN	6137	2992	9128
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9132	25.654	NaN	3907.8	30	0	488.95	0.106	+			28732	NNRSLDLD	8	66	473.73317567833413	945.4517984234683	2	473.73333740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NNRSLDLD_	CON__P04264;CON__P12035;CON__P50446;CON__Q5XQN5;CON__Q6IFZ6;CON__Q7Z794;CON__Q8BGZ7;CON__Q922U2;ENSG00000167768|ENST00000252244|KRT1;ENSG00000186442|ENST00000417996|KRT3;ENSG00000189182|ENST00000341809|KRT77	96.19043198914106	0.25873003980794995	4				NaN	NaN	0	NaN	6138	2992	9128
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9133	25.656	NaN	4945.3	30	0	447.37	0.106	+			38018	SPMNHSVQM	9	64	515.7260977118464	1029.4376424904926	2	515.7259521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SPMNHSVQM_	CREBBP|p.Q2411Sfs*2|1|0.24|ENSG00000005339|chr16:3727816-3727816|G/-|frameshift_variant;CREBBP|p.S976Pfs*22|1|0.09|ENSG00000005339|chr16:3769309-3769309|G/-|frameshift_variant;ENSG00000005339|ENST00000262367|CREBBP;nc|ENSG00000005339|Q92793-2|CREBBP	46.45678178249821	0.34452392205506005	4				NaN	NaN	0	NaN	6139	2992	9128
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9134	25.657	NaN	8107.7	30	0	3406.7	0.037			+	9232	EGTHARRHVA	10	90	378.5363160677612	1132.5871188034837	3	378.536376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EGTHARRHVA_	REV__ENSG00000197037|ENST00000394152|ZSCAN25;REV__nc|ENSG00000197037|Q6NSZ9-2|ZSCAN25;REV__nc|ENSG00000197037|Q6NSZ9-3|ZSCAN25	21.9598887501803	0.7004979571547932	4				NaN	NaN	0	NaN	6140	2992	9128
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9135	25.658	NaN	3088.9	30	0	339.2	0.139	+			27973	MVLPMPRL	8	44	478.7740127849794	955.5334726367588	2	478.774169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MVLPMPRL_	ENSG00000145996|ENST00000274695|CDKAL1;nc|ENSG00000145996|Q5VV42-2|CDKAL1	29.841539824830324	0.7289191502596711	4				NaN	NaN	0	NaN	6141	2992	9128
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9153	25.697	NaN	31637	30	0	3306.7	0.214	+			20223	KELLQKEL	8	75	500.8044079589454	999.5942629846908	2	500.8053283691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KELLQKEL_	ENSG00000188015|ENST00000368713|S100A3	185.71840793949184	0.09160682937709909	4				NaN	NaN	0	NaN	6156	2995	9152
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9154	25.701	NaN	5347.9	30	0	852.11	0.106			+	-1	SCDTLAHIEE	10	57	587.7551986198698	1173.4958443065395	2	587.7547607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SC(Carbamidomethyl (C))DTLAHIEE_	REV__CASK|p.N757Tfs*40|1|0.18|ENSG00000147044|chrX:41534753-41534753|T/-|frameshift_variant;REV__ENSG00000147044|ENST00000378163|CASK;REV__nc|ENSG00000147044|O14936-2|CASK;REV__nc|ENSG00000147044|O14936-3|CASK;REV__nc|ENSG00000147044|O14936-4|CASK;REV__nc|ENSG00000147044|O14936-6|CASK	29.14955571784316	0.6417842315402807	4				NaN	NaN	0	NaN	6157	2995	9152
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9155	25.703	NaN	3063.7	30	0	446.43	0.106	+			27032	LYTYKRTH	8	58	541.2930163276824	1080.5714797221647	2	541.292724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LYTYKRTH_	ENSG00000125912|ENST00000246117|NCLN;nc|ENSG00000125912|Q969V3-2|NCLN	44.116797842482775	0.6307669463330267	4				NaN	NaN	0	NaN	6158	2995	9152
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9156	25.705	NaN	2858.5	30	0	526.66	0.106	+			11242	FIKDFNIK	8	61	512.7952205007921	1023.5758880683842	2	512.793701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FIKDFNIK_	tr|U7SU67|U7SU67_FUSNUNon-specificserine/threonineproteinkinaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01120PE=4SV=1	35.61828744233558	0.6843154725607303	4				NaN	NaN	0	NaN	6159	2995	9152
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9157	25.706	NaN	2320.2	30	0	213.05	0.106			+	43294	TFLTTHTSA	9	66	489.7485194517713	NaN	0	489.747802734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TFLTTHTSA_	REV__ENSG00000205277|ENST00000536621|MUC12;REV__ENSG00000205277|ENST00000536621|MUC12;REV__ENSG00000205277|ENST00000536621|MUC12;REV__ENSG00000205277|ENST00000536621|MUC12;REV__nc|ENSG00000205277|Q9UKN1|MUC12;REV__nc|ENSG00000205277|Q9UKN1|MUC12;REV__nc|ENSG00000205277|Q9UKN1|MUC12;REV__nc|ENSG00000205277|Q9UKN1|MUC12	23.04248740728303	0.3589936788096251	4				NaN	NaN	0	NaN	6160	2995	9152
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9158	25.708	NaN	2733.6	30	0	493.44	0.035			+	9491	EKSRDKER	8	60	524.2822255089263	1046.5498980846526	2	524.2822875976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EKSRDKER_	REV__ENSG00000153914|ENST00000334121|SREK1;REV__nc|ENSG00000153914|Q8WXA9|SREK1;REV__SREK1|p.K360Nfs*40|1|0.31|ENSG00000153914|chr5:66170886-66170886|A/-|frameshift_variant	26.69291269510374	0.7532304684939817	4				NaN	NaN	0	NaN	6161	2995	9152
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9159	25.709	NaN	2142.1	30	0	223.05	0.139	+			2146	ALLFTSKK	8	47	454.2842721609548	906.5539913887096	2	454.283935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ALLFTSKK_	ENST00000539921.5_1_11:62619473-62619665:-|nuORF	45.9519527083369	0.6193794311207887	4				NaN	NaN	0	NaN	6162	2995	9152
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9177	25.748	NaN	20245	30	0	2980.8	0.214	+			27724	MQLGVHYSK	9	75	531.7737592910855	1061.532965648971	2	531.7738037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MQLGVHYSK_	ENST00000430246.6_1_14:21731784-21731862:-|nuORF;ENST00000554969.5_1_14:21731484-21731862:-|nuORF	129.42129120953632	0.01549634589885217	4				NaN	NaN	0	NaN	6177	2998	9176
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9178	25.752	NaN	13975	30	0	4748.7	0.106			+	25230	LNAVENYEHTQ	11	79	659.3069945494242	NaN	0	659.3070068359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LNAVENYEHTQ_	REV__ENSG00000111224|ENST00000228820|PARP11;REV__nc|ENSG00000111224|Q9NR21-1|PARP11;REV__nc|ENSG00000111224|Q9NR21-2|PARP11;REV__nc|ENSG00000111224|Q9NR21-5|PARP11	68.84614121027924	0.1478820782847342	4				NaN	NaN	0	NaN	6178	2998	9176
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9179	25.754	NaN	10975	30	0	3801.4	0.106	+			3167	ASIPHVIAR	9	90	321.8625505842614	962.5658223529842	3	321.86273193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASIPHVIAR_	ACTR8|p.S259Qfs*18|1|0.38|ENSG00000113812|chr3:53876623-53876623|A/-|frameshift_variant;ENSG00000113812|ENST00000335754|ACTR8	24.519189625965996	0.574102787014149	4				NaN	NaN	0	NaN	6179	2998	9176
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9180	25.756	NaN	3983.9	30	0	399.71	0.106	+			12969	GETHVAVPAT	10	65	491.25391407263874	980.4932752120775	2	491.29534912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GETHVAVPAT_	ENST00000393539.6_1_16:71495855-71496077:-|nuORF	45.97224482568171	0.49411383603842696	4				NaN	NaN	0	NaN	6180	2998	9176
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9181	25.757	NaN	2176.5	30	0	229.86	0.106	+			2827	ASAAVLFHK	9	58	472.2713317871094	NaN	0	472.2713317871094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASAAVLFHK_	ENSG00000108187|ENST00000358769|PBLD;ENST00000478192.1_1_10:70055990-70056739:-|nuORF;nc|ENSG00000108187|P30039-2|PBLD	54.776311868738084	0.17377682019723872	4				NaN	NaN	0	NaN	6181	2998	9176
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9182	25.759	NaN	5642.4	30	0	829.43	0.039				-1	MIEAGCFLLTL	11	60	655.3286743164062	NaN	0	655.3286743164062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))MIEAGC(Carbamidomethyl (C))FLLTL_	ENST00000314622.8_1_3:93813901-93813955:+|nuORF	30.317721548370564	0.4303027717346894	4				NaN	NaN	0	NaN	6182	2998	9176
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9183	25.76	NaN	2695.3	30	0	205.31	0.143	+			5576	AVASWSRIK	9	57	509.2956237792969	NaN	0	509.2956237792969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AVASWSRIK_	EDNRB|p.Y293Ifs*3|4|0.17|ENSG00000136160|chr13:77901132-77901132|A/-|frameshift_variant;ENSG00000136160|ENST00000646607|EDNRB;nc|ENSG00000136160|P24530-2|EDNRB;nc|ENSG00000136160|P24530-3|EDNRB	78.26377905018397	0.07733306720594871	4				NaN	NaN	0	NaN	6183	2998	9176
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9195	25.879	NaN	127100	30	0	12828	0.177	+			11457	FNDPNAKEM	9	92	533.2370690513501	1064.4595851695	2	533.237060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FNDPNAKEM_	ENSG00000056097|ENST00000265069|ZFR	186.41076107051632	0.0006524797715399015	4				NaN	NaN	0	NaN	6192	3001	9194
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9196	25.882	NaN	61143	30	0	15316	0.106	+			1807	AIFQGKLEK	9	89	517.3062503430244	1032.5979477528488	2	517.3057250976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AIFQGKLEK_	ENSG00000118322|ENST00000327245|ATP10B	164.45504665044191	0.003713414289755139	4				NaN	NaN	0	NaN	6193	3001	9194
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9197	25.884	NaN	20591	30	0	2896.1	0.106	+			35855	SEDKKNIIL	9	79	530.3061589952506	1058.597765057301	2	530.3060913085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEDKKNIIL_	ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65623404-65625570:-|nuORF	122.1759843771914	0.019882474861609503	4				NaN	NaN	0	NaN	6194	3001	9194
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9198	25.885	NaN	10003	30	0	1030.3	0.106	+			21763	KQQRGKQK	8	71	500.8044079589454	999.5942629846908	2	501.3031005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KQQRGKQK_	ENSG00000196950|ENST00000359634|SLC39A10;ENST00000430412.5_1_2:196521853-196599762:+|nuORF;ENST00000465851.1_1_2:196545249-196581758:+|nuORF;nc|ENSG00000196950|Q9ULF5-2|SLC39A10	68.484700416344	0.4195245774506064	4				NaN	NaN	0	NaN	6195	3001	9194
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9199	25.887	NaN	7877.7	30	0	1457.3	0.106	+			43034	TEKVSKISL	9	94	335.53753089904353	1003.5907632973306	3	335.5376892089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TEKVSKISL_	ENSG00000054523|ENST00000676179|KIF1B;ENSG00000130294|ENST00000498729|KIF1A;KIF1A|p.N1306Kfs*14|1|0.46|ENSG00000130294|chr2:240725306-240725307|-/T|frameshift_variant;KIF1A|p.R782Afs*30|1|0.33|ENSG00000130294|chr2:240760738-240760738|G/-|frameshift_variant;KIF1B|p.N365Mfs*8|1|0.32|ENSG00000054523|chr1:10278037-10278037|C/-|frameshift_variant;nc|ENSG00000054523|O60333-2|KIF1B;nc|ENSG00000054523|O60333-3|KIF1B;nc|ENSG00000054523|O60333-4|KIF1B;nc|ENSG00000130294|Q12756-2|KIF1A;nc|ENSG00000130294|Q12756|KIF1A	49.536043120802724	0.308405419312776	4				NaN	NaN	0	NaN	6196	3001	9194
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9200	25.889	NaN	5539.3	30	0	560.69	0.106	+			11033	FEKTQKELL	9	75	379.2165853911649	1134.6279267736948	3	379.2166748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FEKTQKELL_	ENSG00000050820|ENST00000162330|BCAR1;ENST00000566982.1_1_16:75263411-75272069:-|nuORF;nc|ENSG00000050820|P56945-2|BCAR1;nc|ENSG00000050820|P56945-3|BCAR1;nc|ENSG00000050820|P56945-4|BCAR1;nc|ENSG00000050820|P56945-5|BCAR1;nc|ENSG00000050820|P56945-6|BCAR1;nc|ENSG00000050820|P56945-7|BCAR1;nc|ENSG00000050820|P56945-8|BCAR1	45.97224482568171	0.3502073465782774	4				NaN	NaN	0	NaN	6197	3001	9194
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9201	25.891	NaN	16253	30	0	4388.9	0.037	+			51549	YYDTHTNTY	9	79	589.2441668602913	1176.4737807873826	2	589.24365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YYDTHTNTY_	ENSG00000064651|ENST00000262461|SLC12A2;nc|ENSG00000064651|P55011-3|SLC12A2;SLC12A2|p.E1119Rfs*7|1|0.47|ENSG00000064651|chr5:128184417-128184418|-/A|frameshift_variant;SLC12A2|p.F466Lfs*59|1|0.11|ENSG00000064651|chr5:128135793-128135793|T/-|frameshift_variant;SLC12A2|p.P1171Sfs*18|1|0.38|ENSG00000064651|chr5:128186498-128186499|-/TC|frameshift_variant	185.54966270084765	0.0007389233275946833	4				NaN	NaN	0	NaN	6198	3001	9194
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9219	25.928	NaN	42629	30	0	27873	0.214	+			1809	AIFQGKLEK	9	97	345.20601115400206	1032.5962040622062	3	345.2062683105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AIFQGKLEK_	ENSG00000118322|ENST00000327245|ATP10B	66.96192283764107	0.15557981141143568	4				NaN	NaN	0	NaN	6213	3004	9218
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9220	25.931	NaN	11879	30	0	1530.8	0.106				-1	CDPNRLPPY	9	65	566.2665248368344	1130.5184967404687	2	566.2666625976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_C(Carbamidomethyl (C))DPNRLPPY_	ENSG00000163975|ENST00000296350|MELTF;MFI2|p.V627Cfs*29|1|0.15|ENSG00000163975|chr3:197006608-197006609|-/A|frameshift_variant	42.396135135203025	0.392153681582562	4				NaN	NaN	0	NaN	6214	3004	9218
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9221	25.933	NaN	14341	30	0	713.08	0.106	+			50223	WNLYHYYKQFF	11	101	804.8862066814445	1607.757860429689	2	805.386962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_WNLYHYYKQFF_	ENSG00000112159|ENST00000369393|MDN1;MDN1|p.L4077Cfs*15|1|0.16|ENSG00000112159|chr6:89680625-89680625|G/-|frameshift_variant;MDN1|p.L5278Ffs*6|1|0.18|ENSG00000112159|chr6:89652273-89652274|-/A|frameshift_variant	14.864876125193954	0.8008860636109596	4				NaN	NaN	0	NaN	6215	3004	9218
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9222	25.935	NaN	5752.8	30	0	1102.8	0.106	+			36212	SELRAPPVI	9	87	327.8619799434897	980.5641104306692	3	327.8622741699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SELRAPPVI_	ENST00000481257.5_3_19:36501646-36504244:-|nuORF	31.954861631926434	0.5046124803899898	4				NaN	NaN	0	NaN	6216	3004	9218
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9223	25.937	NaN	3591.5	30	0	535.21	0.106	+			11306	FKTGVLGQ	8	63	425.2448886725926	848.4752244119852	2	425.2452697753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FKTGVLGQ_	ENST00000566468.1_1_15:74883534-74883915:+|nuORF;nc|ENSG00000179361|Q8IVW6-3|ARID3B	82.30502934623384	0.30436709589983096	4				NaN	NaN	0	NaN	6217	3004	9218
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9224	25.939	NaN	6345.2	30	0	488.95	0.035			+	19436	KAQLIYGKS	9	95	336.53427741623517	NaN	0	336.5343322753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KAQLIYGKS_	REV__ENSG00000023909|ENST00000370238|GCLM;REV__nc|ENSG00000023909|P48507-2|GCLM	24.519189625965996	0.35377483217337163	4				NaN	NaN	0	NaN	6218	3004	9218
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9225	25.939	NaN	7081.4	30	0	636.69	0.14	+			14716	GTILGTRSLK	10	68	523.3219511100192	1044.6293492868383	2	523.3218383789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GTILGTRSLK_	ENSG00000163798|ENST00000326019|SLC4A1AP;nc|ENSG00000163798|Q9BWU0-1|SLC4A1AP;SLC4A1AP|p.F378Lfs*8|1|0.18|ENSG00000163798|chr2:27667375-27667375|T/-|frameshift_variant;SLC4A1AP|p.L669Tfs*8|1|0.38|ENSG00000163798|chr2:27685159-27685160|-/A|frameshift_variant	91.26522074875469	0.12383023862516404	4				NaN	NaN	0	NaN	6219	3004	9218
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9243	25.977	NaN	38296	30	0	22587	0.214	+			12153	GAIKVFVNK	9	99	325.870896059471	974.5908587786131	3	325.8710632324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GAIKVFVNK_	ENSG00000131725|ENST00000254029|WDR44;nc|ENSG00000131725|Q5JSH3-2|WDR44;nc|ENSG00000131725|Q5JSH3-4|WDR44;WDR44|p.F898L|1|0.26|ENSG00000131725|chrX:118448939-118448939|C/A|missense_variant	53.351449002276354	0.2690372970092375	4				NaN	NaN	0	NaN	6234	3007	9242
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9244	25.98	NaN	47137	30	0	12612	0.106			+	-1	LVCPCLLVL	9	99	343.8660370779347	1028.5762818340042	3	343.8662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LVC(Carbamidomethyl (C))PCLLVL_	REV__B3GALNT2|p.G383Efs*5|1|0.06|ENSG00000162885|chr1:235455562-235455562|C/-|frameshift_variant;REV__ENSG00000162885|ENST00000366600|B3GALNT2;REV__nc|ENSG00000162885|Q8NCR0-2|B3GALNT2	29.14955571784316	0.5308295550522326	4				NaN	NaN	0	NaN	6235	3007	9242
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9245	25.982	NaN	9288.2	30	0	1426.5	0.106	+			9474	EKQVLLQADW	10	71	615.3302410730515	1228.645929212903	2	615.3302612304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EKQVLLQADW_	ENSG00000218891|ENST00000325421|ZNF579;ZNF579|p.P264Rfs*141|1|0.3|ENSG00000218891|chr19:55578854-55578854|C/-|frameshift_variant	36.31764250033197	0.5830761606467809	4				NaN	NaN	0	NaN	6236	3007	9242
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9246	25.984	NaN	3318.3	30	0	982.72	0.106				-1	QCQLNLLG	8	55	473.2453457502691	944.4761385673382	2	473.2449645996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_QC(Carbamidomethyl (C))QLNLLG_	nc|ENSG00000100324|Q15750-2|TAB1	31.954861631926434	0.7126016770032289	4				NaN	NaN	0	NaN	6237	3007	9242
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9247	25.986	NaN	3984.1	30	0	930.41	0.106			+	24892	LKLFGKAA	8	58	424.27347438211245	846.5323958310249	2	424.273681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LKLFGKAA_	REV__ENSG00000103740|ENST00000258873|ACSBG1	26.79610172149135	0.7524337208463756	4				NaN	NaN	0	NaN	6238	3007	9242
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9248	25.988	NaN	2864.5	30	0	554.19	0.034	+			9705	EMIMLGRL	8	59	481.7617673484571	961.5089817637142	2	481.7613525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EMIMLGRL_	ENSG00000133460|ENST00000316185|SLC2A11;ENST00000255830.7_1_22:24210693-24224826:+|nuORF;ENST00000405286.6_1_22:24199637-24224826:+|nuORF;ENST00000461809.5_1_22:24200186-24224826:+|nuORF;ENST00000482576.1_1_22:24217352-24224826:+|nuORF;nc|ENSG00000133460|Q9BYW1-2|SLC2A11;nc|ENSG00000133460|Q9BYW1-4|SLC2A11;nc|ENSG00000133460|Q9BYW1|SLC2A11	53.351449002276354	0.5676011784961348	4				NaN	NaN	0	NaN	6239	3007	9242
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9249	25.988	NaN	2982.3	30	0	330.42	0.14				-1	 	0	60	489.057556473687	2440.251400035435	5	489.25762939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6240	3007	9242
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9267	26.028	NaN	32913	30	0	8893.5	0.214	+			5791	AVGVPIKVK	9	74	455.8080176217341	909.6014823102682	2	455.8077392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVGVPIKVK_	ENSG00000129003|ENST00000644861|VPS13C;nc|ENSG00000129003|Q709C8-2|VPS13C;nc|ENSG00000129003|Q709C8-3|VPS13C;nc|ENSG00000129003|Q709C8-4|VPS13C;VPS13C|p.E2463Nfs*18|1|0.25|ENSG00000129003|chr15:61920157-61920157|C/-|frameshift_variant;VPS13C|p.N3163Sfs*6|1|0.05|ENSG00000129003|chr15:61882732-61882733|-/TTATCATCAC|frameshift_variant;VPS13C|p.P3597Lfs*3|1|0.26|ENSG00000129003|chr15:61868732-61868732|G/-|frameshift_variant	82.30502934623384	0.08758161712619916	4				NaN	NaN	0	NaN	6255	3010	9266
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9268	26.031	NaN	23906	30	0	3007.2	0.106	+			1767	AIAQAESLRYK	11	91	625.3489176833428	1248.6832824334856	2	625.3488159179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AIAQAESLRYK_	ENSG00000149273|ENST00000531188|RPS3;ENST00000433853.1_1_3:183867695-183868220:+|nuORF;ENST00000487417.1_1_12:62415587-62415818:-|nuORF;nc|ENSG00000149273|P23396-2|RPS3	182.91823989275488	6.243756956516254E-06	4				NaN	NaN	0	NaN	6256	3010	9266
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9269	26.033	NaN	10625	30	0	1130.9	0.106	+			4892	ATQEGEWKALK	11	77	630.8331857105854	1259.6518184879708	2	630.8331909179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATQEGEWKALK_	ENSG00000087269|ENST00000416614|NOP14	129.00119753178808	0.0028781539983950004	4				NaN	NaN	0	NaN	6257	3010	9266
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9270	26.035	NaN	6927.7	30	0	930.81	0.106	+			5900	AVLDEAKNINK	11	79	607.8406918704898	1213.6668308077794	2	607.8410034179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVLDEAKNINK_	ENSG00000155980|ENST00000455537|KIF5A;ENSG00000168280|ENST00000435030|KIF5C;ENSG00000170759|ENST00000302418|KIF5B;KIF5B|p.M622Wfs*8|1|0.15|ENSG00000170759|chr10:32022898-32022898|T/-|frameshift_variant;KIF5C|p.S816Vfs*68|1|0.35|ENSG00000168280|chr2:149005459-149005459|A/-|frameshift_variant;nc|ENSG00000168280|O60282-2|KIF5C	106.88024417677582	0.046463184254991054	4				NaN	NaN	0	NaN	6258	3010	9266
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9271	26.037	NaN	11817	30	0	4665.5	0.106			+	41917	SVVHRELKI	9	99	360.8887905844408	1079.6445423535224	3	360.8890075683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVVHRELKI_	REV__ENSG00000161405|ENST00000346872|IKZF3;REV__nc|ENSG00000161405|Q9UKT9-13|IKZF3;REV__nc|ENSG00000161405|Q9UKT9-14|IKZF3;REV__nc|ENSG00000161405|Q9UKT9-15|IKZF3;REV__nc|ENSG00000161405|Q9UKT9-2|IKZF3;REV__nc|ENSG00000161405|Q9UKT9-3|IKZF3;REV__nc|ENSG00000161405|Q9UKT9-4|IKZF3;REV__nc|ENSG00000161405|Q9UKT9-5|IKZF3;REV__nc|ENSG00000161405|Q9UKT9-6|IKZF3;REV__nc|ENSG00000161405|Q9UKT9-7|IKZF3;REV__nc|ENSG00000161405|Q9UKT9-8|IKZF3	60.11826168202944	0.21262886028301267	4				NaN	NaN	0	NaN	6259	3010	9266
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9272	26.039	NaN	23554	30	0	4032.6	0.035	+			43077	TELTTKSSL	9	83	490.2691619070813	978.5237708809626	2	490.2688903808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TELTTKSSL_	ENSG00000133606|ENST00000255977|MKRN1;ENST00000475010.5_1_7:140155450-140179030:-|nuORF;nc|ENSG00000133606|Q9UHC7-2|MKRN1;nc|ENSG00000133606|Q9UHC7-3|MKRN1;nc|ENSG00000133606|Q9UHC7-4|MKRN1;nc|ENSG00000238222|Q13434|MKRN4P	131.61620852596164	0.014413238321579053	4				NaN	NaN	0	NaN	6260	3010	9266
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9273	26.039	NaN	4598.8	30	0	450.83	0.14			+	34379	RTRNNVLK	8	67	500.8044079589454	999.5942629846908	2	501.80084228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RTRNNVLK_	REV__ENSG00000146755|ENST00000333149|TRIM50;REV__nc|ENSG00000146755|Q86XT4-2|TRIM50;REV__TRIM50|p.Q231Tfs*5|1|0.2|ENSG00000146755|chr7:73318858-73318859|-/C|frameshift_variant	42.396135135203025	0.6414440140393314	4				NaN	NaN	0	NaN	6261	3010	9266
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9291	26.077	NaN	15093	30	0	1684.6	0.214	+			3966	ATATLIIEHK	10	81	548.8220391368073	1095.6295253404146	2	548.822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATATLIIEHK_	ENSG00000100522|ENST00000216410|GNPNAT1;ENST00000553987.1_1_14:53248483-53250189:-|nuORF	197.79262163027192	5.551215892076857E-06	4				NaN	NaN	0	NaN	6276	3013	9290
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9292	26.081	NaN	9610.9	30	0	2987.6	0.106	+			3967	ATATLIIEHK	10	75	366.21669157011434	1095.628245310543	3	366.2169189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATATLIIEHK_	ENSG00000100522|ENST00000216410|GNPNAT1;ENST00000553987.1_1_14:53248483-53250189:-|nuORF	50.033510581677724	0.4566913063131936	4				NaN	NaN	0	NaN	6277	3013	9290
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9293	26.083	NaN	9248.3	30	0	2669.7	0.106	+			1291	AESLIAKKI	9	83	324.8745649949799	971.6018655851396	3	324.87445068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AESLIAKKI_	ENSG00000166226|ENST00000299300|CCT2;ENST00000550638.5_1_12:69979244-69982049:+|nuORF;ENST00000551620.5_1_12:69979244-69983508:+|nuORF;nc|ENSG00000166226|P78371-2|CCT2	37.15910966729921	0.4535818937225704	4				NaN	NaN	0	NaN	6278	3013	9290
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9294	26.084	NaN	15898	30	0	5224.5	0.106	+			39706	STIPPELVKQK	11	78	620.3689872388	1238.7234215443998	2	620.3692626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STIPPELVKQK_	ENSG00000058729|ENST00000283109|RIOK2	85.92353377893507	0.11546253517298165	4				NaN	NaN	0	NaN	6279	3013	9290
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9295	26.086	NaN	9370.8	30	0	524.94	0.106			+	-1	WLRKDCCWRNW	11	90	811.8756767297702	1621.7368005263404	2	811.8748168945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_WLRKDCC(Carbamidomethyl (C))WRNW_	REV__ENSG00000089094|ENST00000377071|KDM2B;REV__ENST00000538503.5_1_12:121878388-121880774:-|nuORF;REV__nc|ENSG00000089094|Q8NHM5-2|KDM2B;REV__nc|ENSG00000089094|Q8NHM5-3|KDM2B;REV__nc|ENSG00000089094|Q8NHM5-4|KDM2B	9.705651100619752	0.8250432705525658	4				NaN	NaN	0	NaN	6280	3013	9290
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9296	26.088	NaN	4816.9	30	0	797.87	0.036	+			1213	AEQKLQQTL	9	66	529.7956802261033	1057.5768075190065	2	529.7957153320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEQKLQQTL_	ENSG00000131626|ENST00000253925|PPFIA1;nc|ENSG00000131626|Q13136-2|PPFIA1	65.15724298150197	0.17062369902793603	4				NaN	NaN	0	NaN	6281	3013	9290
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9297	26.089	NaN	3231.9	30	0	407.73	0.142	+			51401	YTNRDADLF	9	53	557.7615356445312	NaN	0	557.7615356445312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YTNRDADLF_	ENSG00000112175|ENST00000370830|BMP5;nc|ENSG00000112175|P22003-2|BMP5	56.72105179125745	0.16330365735109603	4				NaN	NaN	0	NaN	6282	3013	9290
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9315	26.127	NaN	10004	30	0	1256.8	0.214	+			1839	AIITPPPAK	9	60	454.2842721609548	906.5539913887096	2	454.2840576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AIITPPPAK_	ENSG00000113648|ENST00000511689|MACROH2A1;ENST00000360597.8_1_5:134681666-134724783:-|nuORF;ENST00000506532.5_1_5:134705062-134724783:-|nuORF;ENST00000513210.5_1_5:134695623-134724711:-|nuORF;nc|ENSG00000113648|O75367-3|MACROH2A1;nc|ENSG00000113648|O75367|MACROH2A1	66.42927471994793	0.16001998865088202	4				NaN	NaN	0	NaN	6297	3016	9314
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9316	26.131	NaN	5118	30	0	784.72	0.106	+			41109	SVIQHTNSL	9	69	499.7672148803716	997.5198768275433	2	499.7669677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVIQHTNSL_	ENSG00000010818|ENST00000367603|HIVEP2;ENSG00000095951|ENST00000379388|HIVEP1;HIVEP1|p.I2404Sfs*57|1|0.23|ENSG00000095951|chr6:12163508-12163508|G/-|frameshift_variant;HIVEP2|p.E2269Sfs*37|1|0.07|ENSG00000010818|chr6:142753643-142753643|C/-|frameshift_variant;HIVEP2|p.N2325Kfs*44|1|0.35|ENSG00000010818|chr6:142753473-142753474|-/T|frameshift_variant;HIVEP2|p.S1616Afs*32|1|0.48|ENSG00000010818|chr6:142769894-142769894|G/-|frameshift_variant	66.96192283764107	0.15557981141143568	4				NaN	NaN	0	NaN	6298	3016	9314
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9317	26.133	NaN	6481.3	30	0	824.25	0.106	+			39014	SSSGHMHAL	9	65	463.71202244456185	925.4094919559237	2	463.7114562988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSSGHMHAL_	ENSG00000124006|ENST00000404537|OBSL1;ENST00000465149.1_1_2:220420747-220435459:-|nuORF;nc|ENSG00000124006|O75147-1|OBSL1;nc|ENSG00000124006|O75147-2|OBSL1;nc|ENSG00000124006|O75147-4|OBSL1;OBSL1-MRPL2|1|fusion	33.51558372728122	0.4900267029546261	4				NaN	NaN	0	NaN	6299	3016	9314
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9318	26.135	NaN	7265	30	0	2405.2	0.106	+			9018	EGASPNHTF	9	60	480.2143827109673	958.4142124887346	2	480.2144470214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EGASPNHTF_	ENST00000524227.5_1_8:41525962-41555361:-|nuORF	51.33545320467046	0.2872990594074956	4				NaN	NaN	0	NaN	6300	3016	9314
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9319	26.137	NaN	3858.1	30	0	752.31	0.106	+			49299	VVQPLSIQ	8	53	442.2658672202337	882.5171815072674	2	442.26593017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVQPLSIQ_	ARFGEF3|p.F1125*|1|0.07|ENSG00000112379|chr6:138293997-138293998|TT/-|frameshift_variant;ENSG00000112379|ENST00000251691|ARFGEF3	35.61828744233558	0.6843154725607303	4				NaN	NaN	0	NaN	6301	3016	9314
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9320	26.138	NaN	5317.2	30	0	1890.3	0.035				-1	ISAGNGCGVW	10	67	510.73271206916047	1019.450871205121	2	510.7328186035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_ISAGNGC(Carbamidomethyl (C))GVW_	ENST00000517402.1_1_7:27221420-27221732:-|nuORF	39.252832667884924	0.5560298534376815	4				NaN	NaN	0	NaN	6302	3016	9314
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9321	26.139	NaN	4140	30	0	531.96	0.141	+			40404	STVGAGAYAYK	11	66	544.2749930025053	1086.5354330718105	2	544.2749633789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STVGAGAYAYK_	ENSG00000156709|ENST00000287295|AIFM1;nc|ENSG00000156709|O95831-4|AIFM1	67.49366992349736	0.25663419177724	4				NaN	NaN	0	NaN	6303	3016	9314
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9339	26.178	NaN	43999	30	0	30753	0.214	+			8799	EEKKIKVIL	9	75	367.24088014072004	1098.70081102236	3	367.24102783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EEKKIKVIL_	ENSG00000162434|ENST00000342505|JAK1;JAK1|p.K860Nfs*16|3|0.29|ENSG00000162434|chr1:64841314-64841314|T/-|frameshift_variant	38.80614096846853	0.43426287593479557	4				NaN	NaN	0	NaN	6318	3019	9338
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9340	26.182	NaN	18336	30	0	2726.4	0.106	+			35329	SANSHNIAL	9	72	463.738408854519	925.462264775838	2	463.7380065917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SANSHNIAL_	ENSG00000030066|ENST00000378460|NUP160;nc|ENSG00000030066|Q12769|NUP160	95.81516180277367	0.04847050768394289	4				NaN	NaN	0	NaN	6319	3019	9338
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9341	26.184	NaN	10517	30	0	1287.9	0.106	+			5983	AVLRVAGSLQK	11	75	571.3566131825307	1140.6986734318614	2	571.3568115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVLRVAGSLQK_	ENSG00000115561|ENST00000263856|CHMP3;ENST00000494623.1_1_2:86734536-86737699:-|nuORF;nc|ENSG00000115561|Q9Y3E7-2|CHMP3;nc|ENSG00000115561|Q9Y3E7-3|CHMP3	107.45493779368988	0.045275086874925735	4				NaN	NaN	0	NaN	6320	3019	9338
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9342	26.186	NaN	10763	30	0	5261	0.106			+	48111	VSTVTPKQV	9	66	479.781834910389	957.5491168875781	2	479.78173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSTVTPKQV_	REV__ENST00000508531.1_1_4:95445006-95500681:+|nuORF;REV__ENST00000514830.5_1_4:95376439-95503710:+|nuORF;REV__nc|ENSG00000163110|Q96HC4-2|PDLIM5;REV__nc|ENSG00000163110|Q96HC4-4|PDLIM5;REV__nc|ENSG00000163110|Q96HC4-6|PDLIM5;REV__nc|ENSG00000163110|Q96HC4-7|PDLIM5	32.81241826257853	0.4965981579233955	4				NaN	NaN	0	NaN	6321	3019	9338
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9343	26.187	NaN	6797.2	30	0	1469	0.106	+			17820	IEYAKPTRL	9	74	364.21310046701456	1089.6174720012436	3	364.2132873535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IEYAKPTRL_	ENSG00000104824|ENST00000221419|HNRNPL;HNRNPL|p.P337Hfs*58|9|0.35|ENSG00000104824|chr19:38840319-38840319|G/-|frameshift_variant;HNRNPL|p.P338Tfs*56|1|0.23|ENSG00000104824|chr19:38840318-38840319|-/G|frameshift_variant;nc|ENSG00000104824|P14866-2|HNRNPL	36.446750945000026	0.4619375763483977	4				NaN	NaN	0	NaN	6322	3019	9338
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9344	26.189	NaN	2915.3	30	0	365.68	0.035	+			42869	TEGQVVNKL	9	60	494.2775321081927	986.5405112831854	2	494.2772521972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TEGQVVNKL_	ENSG00000183963|ENST00000333137|SMTN;ENST00000460658.5_1_22:31484094-31491444:+|nuORF;ENST00000489337.5_1_22:31484532-31494796:+|nuORF;nc|ENSG00000183963|P53814-6|SMTN;nc|ENSG00000183963|P53814|SMTN;SMTN|p.A318Pfs*39|1|0.29|ENSG00000183963|chr22:31090967-31090967|C/-|frameshift_variant;SMTN|p.G455Afs*3|1|0.38|ENSG00000183963|chr22:31091383-31091383|G/-|frameshift_variant;SMTN|p.L317Pfs*24|1|0.4|ENSG00000183963|chr22:31090966-31090967|-/C|frameshift_variant;SMTN|p.S536Vfs*33|1|0.33|ENSG00000183963|chr22:31091813-31091813|C/-|frameshift_variant	37.81151784470057	0.4459294069877048	4				NaN	NaN	0	NaN	6323	3019	9338
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9345	26.19	NaN	9756.2	30	0	1142.4	0.145			+	33666	RNGTRPLDLIW	11	89	670.875451845197	1339.7363507571938	2	670.87451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RNGTRPLDLIW_	REV__ENSG00000198556|ENST00000331410|ZNF789;REV__ENST00000494186.1_1_7:99081675-99098383:+|nuORF	63.42647028704847	0.292869158926425	4				NaN	NaN	0	NaN	6324	3019	9338
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9361	26.225	NaN	10787	30	0	2468.6	0.214	+			26569	LTTAVITNK	9	69	480.7897058512585	959.564858769317	2	480.7893371582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LTTAVITNK_	ENSG00000104408|ENST00000220849|EIF3E	90.60085204095205	0.06317133949006545	4				NaN	NaN	0	NaN	6337	3022	9360
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9362	26.229	NaN	4176.8	30	0	409.28	0.106	+			1808	AIFQGKLEK	9	66	517.3062503430244	1032.5979477528488	2	517.3056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AIFQGKLEK_	ENSG00000118322|ENST00000327245|ATP10B	76.16968421966216	0.11411088698345859	4				NaN	NaN	0	NaN	6338	3022	9360
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9363	26.231	NaN	5324.8	30	0	718.07	0.106			+	41079	SVINELRKM	9	71	545.3064294480879	1088.5983059629757	2	545.306396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVINELRKM_	REV__ENSG00000163072|ENST00000317647|NOSTRIN;REV__ENST00000472260.1_1_2:169713171-169721477:+|nuORF;REV__nc|ENSG00000163072|Q8IVI9-2|NOSTRIN;REV__nc|ENSG00000163072|Q8IVI9-3|NOSTRIN;REV__nc|ENSG00000163072|Q8IVI9-4|NOSTRIN;REV__NOSTRIN|p.K461Rfs*5|1|0.24|ENSG00000163072|chr2:168862044-168862044|A/-|frameshift_variant	47.657333605630114	0.33044192980041115	4				NaN	NaN	0	NaN	6339	3022	9360
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9364	26.232	NaN	9297.7	30	0	1935.5	0.106				-1	 	0	77	339.19041762005685	1014.5494234603706	3	339.19049072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6340	3022	9360
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9365	26.234	NaN	5092.5	30	0	558	0.106	+			12511	GEEQNRVQL	9	68	536.7728332577072	NaN	0	536.7731323242188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GEEQNRVQL_	ENSG00000008869|ENST00000233099|HEATR5B;nc|ENSG00000008869|Q9P2D3-3|HEATR5B	72.87924865735499	0.09578366712754152	4				NaN	NaN	0	NaN	6341	3022	9360
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9366	26.236	NaN	3956.2	30	0	1391.1	0.033				-1	 	0	52	424.7549122039253	847.4952714746506	2	424.7549743652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6342	3022	9360
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9367	26.237	NaN	4157	30	0	824.95	0.14			+	7893	DRSSSLFLP	9	58	511.2695383035419	1020.5245236738838	2	511.2693176269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DRSSSLFLP_	REV__ENST00000358127.8_1_9:36840226-36840553:-|nuORF	60.97194046774394	0.20551255781574032	4				NaN	NaN	0	NaN	6343	3022	9360
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9382	26.27	NaN	7126.1	30	0	1225.4	0.214	+			31707	QNPPPSSPK	9	63	476.2482800056209	950.4820070780419	2	476.2478942871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QNPPPSSPK_	ENSG00000138347|ENST00000358913|MYPN;MYPN|p.I891*|1|0.12|ENSG00000138347|chr10:68175423-68175423|A/-|frameshift_variant;nc|ENSG00000138347|Q86TC9-2|MYPN	51.19269402634007	0.2889735674168909	4				NaN	NaN	0	NaN	6355	3025	9381
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9383	26.273	NaN	7323.9	30	0	921.96	0.106	+			42025	SVYVLVRQK	9	72	546.3323473531169	1090.6501417730337	2	546.3324584960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVYVLVRQK_	ENSG00000197601|ENST00000354817|FAR1	114.8945686534367	0.024290463251177924	4				NaN	NaN	0	NaN	6356	3025	9381
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9384	26.276	NaN	4718.5	30	0	693.27	0.106	+			49043	VVIGRSGEMIK	11	66	594.8419775094173	1187.6694020856346	2	594.8419189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVIGRSGEMIK_	ENSG00000088247|ENST00000600480|KHSRP;KHSRP|p.G663Vfs*60|1|0.14|ENSG00000088247|chr19:6415280-6415280|C/-|frameshift_variant;KHSRP|p.Q699Sfs*24|1|0.35|ENSG00000088247|chr19:6415173-6415173|G/-|frameshift_variant;nc|ENSG00000088247|Q92945|KHSRP	70.72838890466396	0.22966736524121345	4				NaN	NaN	0	NaN	6357	3025	9381
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9385	26.277	NaN	3499.6	30	0	416.34	0.106	+			1833	AIIIYQTHK	9	63	543.8190263196196	1085.6234997060392	2	543.819580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AIIIYQTHK_	ENSG00000113163|ENST00000643780|CERT1;nc|ENSG00000113163|Q9Y5P4-2|CERT1;nc|ENSG00000113163|Q9Y5P4-3|CERT1	69.6276240434122	0.14239879520340665	4				NaN	NaN	0	NaN	6358	3025	9381
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9386	26.279	NaN	4019.2	30	0	713.43	0.106	+			3978	ATATVAALQEK	11	68	551.8102176993801	1101.6058824655602	2	551.80908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATATVAALQEK_	ENSG00000122515|ENST00000309315|ZMIZ2;nc|ENSG00000122515|Q8NF64-2|ZMIZ2;nc|ENSG00000122515|Q8NF64-3|ZMIZ2	47.227680397652996	0.4590463137409202	4				NaN	NaN	0	NaN	6359	3025	9381
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9387	26.281	NaN	5186	30	0	608.85	0.036	+			18364	IQNWTLGAVG	10	82	529.785447353822	1057.5563417744438	2	529.7867431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IQNWTLGAVG_	ENST00000525765.5_1_11:65652578-65653076:-|nuORF;ENST00000532679.5_1_11:65652935-65653190:-|nuORF;nc|ENSG00000172500|O43427|FIBP	69.6276240434122	0.2803623802747859	4				NaN	NaN	0	NaN	6360	3025	9381
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9388	26.282	NaN	5540.8	30	0	1037.7	0.142	+			3058	ASFLPPSSVKK	11	66	580.8377114413859	1159.6608699495716	2	580.83740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASFLPPSSVKK_	ENSG00000104549|ENST00000265896|SQLE;SQLE|p.Y455Lfs*21|1|0.14|ENSG00000104549|chr8:125018642-125018643|-/T|frameshift_variant	41.1089822145965	0.5427687864994973	4				NaN	NaN	0	NaN	6361	3025	9381
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9406	26.319	NaN	11185	30	0	1111	0.214	+			19182	IYTKLNQKI	9	67	560.8402211341495	1119.6658893350989	2	560.8401489257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IYTKLNQKI_	ENSG00000138190|ENST00000260762|EXOC6;EXOC6|p.L640Ffs*39|1|0.37|ENSG00000138190|chr10:92974192-92974193|-/T|frameshift_variant;nc|ENSG00000138190|Q8TAG9-2|EXOC6	126.24258497203832	0.01742065577488747	4				NaN	NaN	0	NaN	6376	3028	9405
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9407	26.323	NaN	6354.9	30	0	681.52	0.106	+			29075	NTLADERVL	9	63	515.7800824907426	1029.5456120482852	2	515.7801513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NTLADERVL_	tr|U7T1K9|U7T1K9_FUSNUFlavinreductaselikedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00852PE=3SV=1	47.657333605630114	0.33044192980041115	4				NaN	NaN	0	NaN	6377	3028	9405
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9408	26.325	NaN	6350.6	30	0	2206.8	0.106	+			37396	SLGASSFVEEE	11	68	577.7631054226038	1153.5116579120074	2	577.7628784179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLGASSFVEEE_	ENSG00000174227|ENST00000453061|PIGG;ENST00000511247.1_1_4:517319-518397:+|nuORF;nc|ENSG00000174227|Q5H8A4-2|PIGG;nc|ENSG00000174227|Q5H8A4-3|PIGG	52.936696900407355	0.3865048210802777	4				NaN	NaN	0	NaN	6378	3028	9405
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9409	26.327	NaN	4657.2	30	0	1099.2	0.106	+			29392	PAPRLPAEF	9	86	333.18658482369375	996.5379250712813	3	333.5210266113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PAPRLPAEF_	ENST00000588238.1_1_19:4445497-4445788:-|nuORF	25.450171626174864	0.5654022654467333	4				NaN	NaN	0	NaN	6379	3028	9405
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9410	26.329	NaN	3928	30	0	554.16	0.106				-1	GTLMWHQMK	9	58	574.2729559670454	1146.5313590008907	2	574.2725219726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_GTLM(Oxidation (M))WHQMK_	ENST00000346169.6_1_3:184032401-184033585:+|nuORF;ENST00000352767.7_2_3:184032446-184033585:+|nuORF	27.882242232435846	0.5426732730940306	4				NaN	NaN	0	NaN	6380	3028	9405
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9411	26.33	NaN	2634.8	30	0	456.58	0.036				-1	MSEEDMLQA	9	53	535.2140502929688	NaN	0	535.2140502929688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_M(Oxidation (M))SEEDMLQA_	ENSG00000066427|ENST00000644486|ATXN3;nc|ENSG00000066427|P54252-3|ATXN3;nc|ENSG00000066427|P54252-4|ATXN3;nc|ENSG00000066427|P54252-5|ATXN3	23.04248740728303	0.3589936788096251	4				NaN	NaN	0	NaN	6381	3028	9405
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9412	26.331	NaN	12243	30	0	1384.8	0.144	+			19577	KCYEMTDLTNN	11	88	666.2845918179355	1330.554630702671	2	666.2843627929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KCYEMTDLTNN_	ENSG00000145632|ENST00000274289|PLK2;ENST00000504196.1_1_5:57754793-57755897:-|nuORF;ENST00000514306.1_1_5:57754443-57755636:-|nuORF;ENST00000515415.5_1_5:57754112-57754961:-|nuORF;PLK2|p.E130*|1|0.03|ENSG00000145632|chr5:58458832-58458833|-/A|frameshift_variant;PLK2|p.E130Vfs*4|1|0.05|ENSG00000145632|chr5:58458831-58458832|-/GAGAA|frameshift_variant	50.79123845855914	0.4102859592092987	4				NaN	NaN	0	NaN	6382	3028	9405
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9430	26.369	NaN	3149.4	30	0	562.74	0.214	+			15487	GVAGSGLLK	9	64	401.24478126119976	800.4750095891995	2	401.2449645996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVAGSGLLK_	ENST00000276569.7_1_8:66539639-66546356:-|nuORF;ENST00000519352.1_1_8:66545221-66546356:-|nuORF	49.44154591367651	0.3095138337212152	4				NaN	NaN	0	NaN	6397	3031	9429
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9431	26.373	NaN	5803.1	30	0	762.26	0.106				-1	 	0	71	520.2801108246899	519.2728343580899	1	520.2799682617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6398	3031	9429
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9432	26.375	NaN	4718.4	30	0	776.19	0.106	+			9036	EGEQIRAFK	9	68	539.2878016197728	1076.5610503063456	2	539.28857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EGEQIRAFK_	ENSG00000030419|ENST00000434687|IKZF2;ENST00000412444.5_1_2:213872086-213945912:-|nuORF;ENST00000484040.1_1_2:213872086-213878776:-|nuORF;nc|ENSG00000030419|Q9UKS7-2|IKZF2;nc|ENSG00000030419|Q9UKS7-4|IKZF2;nc|ENSG00000030419|Q9UKS7-7|IKZF2;nc|ENSG00000030419|Q9UKS7-8|IKZF2	37.81151784470057	0.4459294069877048	4				NaN	NaN	0	NaN	6399	3031	9429
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9433	26.377	NaN	4168.2	30	0	384.89	0.106	+			37843	SNKKLFSLA	9	90	336.53427741623517	NaN	0	336.5341796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SNKKLFSLA_	NAA60|p.F52L|1|0.31|ENSG00000122390|chr16:3479516-3479516|C/A|missense_variant	29.14955571784316	0.3303970763161698	4				NaN	NaN	0	NaN	6400	3031	9429
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9434	26.379	NaN	5414.2	30	0	604.91	0.106	+			1045	AEKNGYVTV	9	70	490.7560975349718	979.4976421367436	2	490.7556457519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEKNGYVTV_	ENSG00000159210|ENST00000502492|SNF8;ENST00000509989.5_1_17:47007839-47014253:-|nuORF;ENST00000514089.5_1_17:47007839-47013524:-|nuORF	101.25262130126117	0.03792372629710479	4				NaN	NaN	0	NaN	6401	3031	9429
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9435	26.38	NaN	3554.2	30	0	436.94	0.036	+			11900	FTTVLDLVAQ	10	68	553.8088888778202	1105.6032248224403	2	553.8090209960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FTTVLDLVAQ_	tr|U7SU67|U7SU67_FUSNUNon-specificserine/threonineproteinkinaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01120PE=4SV=1	37.81151784470057	0.569310847604193	4				NaN	NaN	0	NaN	6402	3031	9429
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9436	26.381	NaN	6266.5	30	0	1054.6	0.141	+			17972	IGYKYVPEK	9	72	548.8045532882969	1095.5945536433937	2	548.8038940429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IGYKYVPEK_	tr|U7SEE9|U7SEE9_FUSNU2',3'-cyclic-nucleotide3'-phosphodiesteraseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02343PE=4SV=1	32.81241826257853	0.4965981579233955	4				NaN	NaN	0	NaN	6403	3031	9429
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9454	26.42	NaN	8990.7	30	0	1737.4	0.214			+	27237	MELMDARQ	8	69	497.2281963432402	992.4418397532804	2	497.22821044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MELMDARQ_	REV__ENSG00000002822|ENST00000265854|MAD1L1;REV__nc|ENSG00000002822|Q9Y6D9-3|MAD1L1;REV__nc|ENSG00000002822|Q9Y6D9-4|MAD1L1	98.62937762414208	0.25143494708580966	4				NaN	NaN	0	NaN	6418	3034	9453
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9455	26.423	NaN	19357	30	0	1808.4	0.106	+			28354	NEKETMQSL	9	83	540.2556991950378	1078.4968454568755	2	540.2557983398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NEKETMQSL_	CON__Q497I4;CON__Q92764;ENSG00000111057|ENST00000388835|KRT18;ENSG00000197079|ENST00000246639|KRT35;ENST00000402024.2_1_6:116779363-116779789:-|nuORF;ENST00000520711.1_1_8:41368829-41369321:+|nuORF;ENST00000549078.5_1_12:53342924-53344195:+|nuORF;ENST00000577198.5_1_17:26603697-26633156:-|nuORF;ENST00000585825.1_1_17:58887571-58888051:+|nuORF	164.45504665044191	0.003713414289755139	4				NaN	NaN	0	NaN	6419	3034	9453
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9456	26.425	NaN	5313.7	30	0	689.98	0.106			+	46132	VDLQEEAPK	9	62	514.7668540650104	1027.5191551968207	2	514.7667236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VDLQEEAPK_	REV__CENPC|p.T575Lfs*21|1|0.35|ENSG00000145241|chr4:67508995-67508995|T/-|frameshift_variant;REV__ENSG00000145241|ENST00000273853|CENPC;REV__ENST00000506410.1_1_4:68378087-68379960:-|nuORF;REV__ENST00000510189.5_1_4:68359569-68411187:-|nuORF;REV__ENST00000533085.2_1_12:89894792-89896268:+|nuORF;REV__nc|ENSG00000145241|Q03188-2|CENPC	45.97224482568171	0.3502073465782774	4				NaN	NaN	0	NaN	6420	3034	9453
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9457	26.427	NaN	7364.6	30	0	1105.8	0.106	+			3331	ASMGGYTQTMK	11	76	587.7657296941898	NaN	0	587.765869140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASMGGYTQTMK_	ENSG00000104321|ENST00000262209|TRPA1;TRPA1|p.L1023Ffs*15|1|0.42|ENSG00000104321|chr8:72023894-72023895|-/A|frameshift_variant;TRPA1|p.T673Hfs*23|1|0.45|ENSG00000104321|chr8:72046557-72046557|T/-|frameshift_variant	82.83050618871818	0.06837965047298598	4				NaN	NaN	0	NaN	6421	3034	9453
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9458	26.429	NaN	8643.1	30	0	2210.3	0.106	+			5279	ATVGKATGFLK	11	68	546.8243524104931	1091.6341518877862	2	546.8248901367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATVGKATGFLK_	ACLY|p.G297Vfs*31|1|0.32|ENSG00000131473|chr17:41905635-41905635|C/-|frameshift_variant;ENSG00000131473|ENST00000352035|ACLY;nc|ENSG00000131473|P53396-2|ACLY	69.2159832094219	0.24227581199444026	4				NaN	NaN	0	NaN	6422	3034	9453
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9459	26.431	NaN	6415.4	30	0	1180.4	0.037	+			37646	SLQPLEHGVAA	11	72	561.3014526367188	NaN	0	561.3014526367188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLQPLEHGVAA_	ENSG00000128923|ENST00000559228|MINDY2;nc|ENSG00000128923|Q8NBR6-2|MINDY2	47.95952297671804	0.32997419910078585	4				NaN	NaN	0	NaN	6423	3034	9453
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9460	26.431	NaN	4994.9	30	0	654.34	0.14			+	43823	TLRDFNIGI	9	59	524.7936316893637	1047.5727104455273	2	524.793212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TLRDFNIGI_	REV__ENSG00000100731|ENST00000304743|PCNX1;REV__nc|ENSG00000100731|Q96RV3-3|PCNX1;REV__nc|ENSG00000100731|Q96RV3-4|PCNX1	42.396135135203025	0.392153681582562	4				NaN	NaN	0	NaN	6424	3034	9453
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9478	26.471	NaN	100990	30	0	30624	0.214				-1	 	0	86	412.21877973583383	822.4230065384677	2	412.2190246582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6439	3037	9477
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9479	26.474	NaN	30269	30	0	4682.1	0.106	+			14587	GTFVGVHVR	9	78	486.2748578940072	970.5351628548144	2	486.2745361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTFVGVHVR_	ENSG00000176920|ENST00000425340|FUT2	134.81075121484326	0.012914550297035062	4				NaN	NaN	0	NaN	6440	3037	9477
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9480	26.476	NaN	9074.9	30	0	2474.9	0.106			+	48061	VSSLWVRR	8	102	334.86574291487744	NaN	0	334.86578369140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSSLWVRR_	REV__ENSG00000153975|ENST00000368576|ZUP1	35.200714571348534	1.7418937515398478	4				NaN	NaN	0	NaN	6441	3037	9477
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9481	26.478	NaN	5681	30	0	610.48	0.106	+			1840	AIITPPPAK	9	54	454.2842721609548	906.5539913887096	2	454.283935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AIITPPPAK_	ENSG00000113648|ENST00000511689|MACROH2A1;ENST00000360597.8_1_5:134681666-134724783:-|nuORF;ENST00000506532.5_1_5:134705062-134724783:-|nuORF;ENST00000513210.5_1_5:134695623-134724711:-|nuORF;nc|ENSG00000113648|O75367-3|MACROH2A1;nc|ENSG00000113648|O75367|MACROH2A1	56.72105179125745	0.24094814563026265	4				NaN	NaN	0	NaN	6442	3037	9477
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9482	26.48	NaN	8772.8	30	0	816.83	0.106	+			34472	RVAPAHGLFLK	11	92	403.58017800485493	1207.7187046147649	3	403.58013916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RVAPAHGLFLK_	ENSG00000169972|ENST00000379031|PUSL1;ENST00000493657.1_1_1:1246183-1246756:+|nuORF;nc|ENSG00000169972|Q8N0Z8-2|PUSL1	77.53327743719008	0.17293716712445248	4				NaN	NaN	0	NaN	6443	3037	9477
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9483	26.482	NaN	8246.7	30	0	1089.8	0.038			+	31370	QKDVPKELILG	11	77	620.3689872388	1238.7234215443998	2	620.3689575195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QKDVPKELILG_	REV__ENSG00000169093|ENST00000381317|ASMTL;REV__nc|ENSG00000292339|O95671-2|ASMTL;REV__nc|ENSG00000292339|O95671-3|ASMTL	54.343338949951054	0.37394860514808087	4				NaN	NaN	0	NaN	6444	3037	9477
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9484	26.482	NaN	4143.6	30	0	574.88	0.142	+			3324	ASLVLTTGLGA	11	66	501.7953028450942	1001.5760527569885	2	501.7950134277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASLVLTTGLGA_	ENSG00000259803|ENST00000682282|SLC22A31;nc|ENSG00000259803|A6NKX4|SLC22A31	47.657333605630114	0.4531673460382624	4				NaN	NaN	0	NaN	6445	3037	9477
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9502	26.519	NaN	42816	30	0	18139	0.214	+			49080	VVKPPGSSL	9	64	442.2658672202337	882.5171815072674	2	442.26580810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVKPPGSSL_	ENSG00000163930|ENST00000460680|BAP1	95.81516180277367	0.04847050768394289	4				NaN	NaN	0	NaN	6460	3040	9501
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9503	26.523	NaN	13963	30	0	3212.8	0.106	+			36850	SIFGGTDMKK	10	77	542.2789313334686	1082.543309733737	2	542.279052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SIFGGTDMKK_	ENSG00000100297|ENST00000216122|MCM5;ENST00000493076.5_1_22:35806581-35817581:+|nuORF	117.81106730687013	0.030421278947300796	4				NaN	NaN	0	NaN	6461	3040	9501
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9504	26.525	NaN	4726.5	30	0	562.97	0.106	+			28331	NEGKHLYTL	9	70	537.7831182465424	1073.5516835598846	2	537.782958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NEGKHLYTL_	ENSG00000204628|ENST00000512805|RACK1	90.60085204095205	0.06317133949006545	4				NaN	NaN	0	NaN	6462	3040	9501
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9505	26.527	NaN	8323.4	30	0	2794	0.106				-1	WPLELCQSYT	10	66	648.8004069668335	1295.586261000467	2	648.7998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_WPLELC(Carbamidomethyl (C))QSYT_	ENST00000564973.1_1_16:2569080-2569164:+|nuORF	30.317721548370564	0.6322445173429027	4				NaN	NaN	0	NaN	6463	3040	9501
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9506	26.529	NaN	3186.6	30	0	367.52	0.106			+	8506	EATIDRPPK	9	61	513.7824603607229	1025.5503677882457	2	513.7823486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EATIDRPPK_	REV__ENSG00000004487|ENST00000400181|KDM1A;REV__nc|ENSG00000004487|O60341|KDM1A	84.9155231211612	0.07920012719736333	4				NaN	NaN	0	NaN	6464	3040	9501
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9507	26.53	NaN	3842.3	30	0	466.68	0.035	+			29245	NWRRNSTL	8	68	523.7779541015625	NaN	0	523.7779541015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NWRRNSTL_	ENST00000330070.5_1_17:46620914-46621888:-|nuORF	37.15910966729921	1.7418937515398478	4				NaN	NaN	0	NaN	6465	3040	9501
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9508	26.531	NaN	7294	30	0	816.07	0.142			+	25237	LNFQGTLTED	10	75	569.2752761550279	1136.5359993768557	2	569.2755737304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LNFQGTLTED_	REV__ENST00000590750.1_1_19:37264078-37266412:+|nuORF;REV__ENST00000591531.1_1_19:37264096-37264246:+|nuORF	76.16968421966216	0.22691431239609447	4				NaN	NaN	0	NaN	6466	3040	9501
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9526	26.57	NaN	40429	30	0	2959.1	0.214	+			25599	LQKEIEKLE	9	86	565.3274158473666	1128.6402787615332	2	565.3271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LQKEIEKLE_	tr|U7SR00|U7SR00_FUSNUIsoprenyltransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01734PE=3SV=1	190.62248201133156	0.00022967542297918066	4				NaN	NaN	0	NaN	6481	3043	9525
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9527	26.574	NaN	8635.7	30	0	2010.8	0.106			+	7439	DFETRIDEL	9	78	379.85222696806824	1136.5348515044047	3	379.8525695800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DFETRIDEL_	REV__ENSG00000156510|ENST00000354624|HKDC1;REV__ENSG00000156515|ENST00000359426|HK1;REV__ENST00000494253.1_1_10:71098016-71144300:+|nuORF;REV__nc|ENSG00000156510|Q2TB90-2|HKDC1;REV__nc|ENSG00000156510|Q2TB90-3|HKDC1;REV__nc|ENSG00000156515|P19367-2|HK1;REV__nc|ENSG00000156515|P19367-3|HK1;REV__nc|ENSG00000156515|P19367-4|HK1	37.81151784470057	0.4459294069877048	4				NaN	NaN	0	NaN	6482	3043	9525
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9528	26.576	NaN	4130.4	30	0	427.66	0.106	+			1258	AERVLAEKL	9	74	343.5412819856489	1027.6020165571467	3	343.5413818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AERVLAEKL_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	43.650786325866115	0.37743712540499297	4				NaN	NaN	0	NaN	6483	3043	9525
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9529	26.578	NaN	16576	30	0	1582.5	0.106	+			21705	KQIDDLKK	8	74	494.29550411926965	986.5764553053393	2	494.2953186035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KQIDDLKK_	ENSG00000204842|ENST00000673436|ATXN2;nc|ENSG00000204842|Q99700-2|ATXN2;nc|ENSG00000204842|Q99700-4|ATXN2;nc|ENSG00000204842|Q99700-5|ATXN2;nc|ENSG00000204842|Q99700|ATXN2	134.81075121484326	0.23895231276701365	4				NaN	NaN	0	NaN	6484	3043	9525
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9530	26.58	NaN	9899.9	30	0	1313.9	0.106	+			20474	KEWNDSTSV	9	76	533.2466174295621	1064.478681925924	2	533.2540893554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEWNDSTSV_	ENSG00000101347|ENST00000646673|SAMHD1;nc|ENSG00000101347|Q9Y3Z3-3|SAMHD1;nc|ENSG00000101347|Q9Y3Z3-4|SAMHD1	70.8162118820467	0.13725933411854815	4				NaN	NaN	0	NaN	6485	3043	9525
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9531	26.581	NaN	3490.6	30	0	850.94	0.036	+			17968	IGVPLNPLVN	10	77	345.87796856387394	NaN	0	345.8780517578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IGVPLNPLVN_	tr|U7T3D2|U7T3D2_FUSNUIon-translocatingoxidoreductasecomplexsubunitCOS=FusobacteriumnucleatumCTI-5OX=1316586GN=rnfCPE=3SV=1	31.954861631926434	0.3952518850925832	4				NaN	NaN	0	NaN	6486	3043	9525
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9532	26.582	NaN	4496.7	30	0	409.05	0.14	+			42914	TEIEGTQKL	9	70	509.7743953753083	1017.5342378174166	2	509.7744445800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TEIEGTQKL_	ENSG00000120899|ENST00000346049|PTK2B;nc|ENSG00000120899|Q14289-2|PTK2B	67.49366992349736	0.1516260258713357	4				NaN	NaN	0	NaN	6487	3043	9525
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9550	26.621	NaN	8373.6	30	0	874.88	0.215	+			36118	SEKNMISKL	9	73	525.2864334127917	1048.5583138923832	2	525.2867431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEKNMISKL_	ENSG00000036257|ENST00000264414|CUL3;nc|ENSG00000036257|Q13618-2|CUL3;nc|ENSG00000036257|Q13618-3|CUL3	148.6902309647307	0.00717441509122429	4				NaN	NaN	0	NaN	6502	3046	9549
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9551	26.625	NaN	8147.5	30	0	1070.7	0.106	+			20475	KEWNDSTSV	9	60	533.2466174295621	1064.478681925924	2	533.2468872070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEWNDSTSV_	ENSG00000101347|ENST00000646673|SAMHD1;nc|ENSG00000101347|Q9Y3Z3-3|SAMHD1;nc|ENSG00000101347|Q9Y3Z3-4|SAMHD1	56.43379154798735	0.2433427591689151	4				NaN	NaN	0	NaN	6503	3046	9549
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9552	26.627	NaN	4527.4	30	0	645.74	0.106				-1	LELLACPML	9	70	340.18184588894326	1017.5237082670299	3	340.1819152832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_LELLACPM(Oxidation (M))L_	TMCO6|p.V311M|1|0.48|ENSG00000113119|chr5:140643792-140643792|G/A|missense_variant	27.882242232435846	0.5426732730940306	4				NaN	NaN	0	NaN	6504	3046	9549
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9553	26.629	NaN	5523.7	30	0	850.15	0.106	+			6250	AVSKDIANWQK	11	73	630.3407056288661	1258.666858324532	2	630.3409423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVSKDIANWQK_	ENSG00000101161|ENST00000266079|PRPF6;nc|ENSG00000101161|O94906-2|PRPF6;TADA3-PRPF6|1|fusion	63.69406221917213	0.2904805327065929	4				NaN	NaN	0	NaN	6505	3046	9549
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9554	26.63	NaN	5687.9	30	0	905.56	0.106			+	31081	QFGGRGRYGGR	11	52	605.812440049822	1209.610327166444	2	605.8126831054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QFGGRGRYGGR_	REV__ENSG00000270647|ENST00000605844|TAF15;REV__nc|ENSG00000270647|Q92804-2|TAF15;REV__TAF15|p.Y531Lfs*56|1|0.31|ENSG00000270647|chr17:35844881-35844882|-/G|frameshift_variant	25.57405402267927	0.7215402271931856	4				NaN	NaN	0	NaN	6506	3046	9549
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9555	26.632	NaN	7352.3	30	0	797.49	0.043	+			28017	MWSWFLCWKPV	11	80	791.374229773757	1580.7339066143138	2	791.37353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))MWSWFLC(Carbamidomethyl (C))WKPV_	nc|ENSG00000164796|Q7Z407-2|CSMD3	49.536043120802724	0.4274608637932522	4				NaN	NaN	0	NaN	6507	3046	9549
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9556	26.633	NaN	7532.5	30	0	878.45	0.149			+	51540	YWYFHRWAFQE	11	83	816.8731959943192	1631.7318390554383	2	816.8719482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YWYFHRWAFQE_	REV__chr6:34425221-34425583|466|19.44|0.0|20.89|-|ENST00000494077|RPS10-NUDT3,RPS10;REV__ENSG00000124614|ENST00000648437|RPS10;REV__ENST00000408001.1_1_6:34712123-34712447:+|nuORF;REV__ENST00000439253.1_1_9:90631298-90631598:+|nuORF;REV__ENST00000440748.1_1_7:37415149-37415623:+|nuORF;REV__ENST00000477729.1_1_15:60696796-60696997:+|nuORF;REV__ENST00000480942.1_1_6:34392413-34392935:-|nuORF;REV__nc|ENSG00000101278|Q9NQ39|RPS10P5	8.235088202721068	0.8319289349839438	4				NaN	NaN	0	NaN	6508	3046	9549
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9574	26.671	NaN	6280.4	30	0	2051.4	0.214	+			29567	PFDPGILQIP	10	54	366.20594555661256	1095.5960072700377	3	366.2059020996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PFDPGILQIP_	ENST00000578774.1_1_17:38520220-38520388:+|nuORF	21.9598887501803	0.7004979571547932	4				NaN	NaN	0	NaN	6523	3049	9573
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9575	26.674	NaN	3921.2	30	0	335.95	0.106	+			15720	GVRDTRKR	8	79	329.86587697397067	NaN	0	329.8658142089844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GVRDTRKR_	ENST00000584250.1_2_18:21594410-21594599:+|nuORF	18.324413293986947	1.7418937515398478	4				NaN	NaN	0	NaN	6524	3049	9573
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9576	26.676	NaN	5266.4	30	0	722.19	0.106	+			37838	SNGMLTCLLS	10	102	346.8366945737927	NaN	0	346.8366394042969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SNGMLTCLLS_	ENST00000458726.5_1_7:137618524-137618635:-|nuORF	34.172542307311794	0.38797011891751465	4				NaN	NaN	0	NaN	6525	3049	9573
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9577	26.678	NaN	5906	30	0	475.29	0.106	+			10228	ETHPVPQKK	9	66	532.2985095697343	1062.5824662062685	2	532.2992553710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ETHPVPQKK_	ENSG00000173894|ENST00000310942|CBX2	34.172542307311794	0.4838870758800184	4				NaN	NaN	0	NaN	6526	3049	9573
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9578	26.68	NaN	3133.6	30	0	269.46	0.106	+			48843	VVAVLLTKK	9	72	485.83679240163326	969.6590318700665	2	485.8365478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVAVLLTKK_	ENSG00000169710|ENST00000306749|FASN;FASN|p.A413Hfs*39|2|0.47|ENSG00000169710|chr17:82091478-82091478|G/-|frameshift_variant	65.46538089061403	0.16805504838372562	4				NaN	NaN	0	NaN	6527	3049	9573
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9579	26.682	NaN	5322.5	30	0	369.32	0.106				-1	SSFTASMLTIG	11	84	377.51843968635	1129.53348965925	3	377.5185241699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_SSFTASM(Oxidation (M))LTIG_	ENST00000372956.2_1_X:100183406-100183580:-|nuORF	28.5767321226876	0.690044582712672	4				NaN	NaN	0	NaN	6528	3049	9573
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9580	26.684	NaN	5501.2	30	0	674.23	0.039	+			22239	KTAEDAKDFFK	11	68	650.3331034480988	1298.6516539629974	2	650.3324584960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KTAEDAKDFFK_	ENSG00000123349|ENST00000334478|PFDN5;ENST00000552341.5_1_12:53691573-53693126:+|nuORF;ENST00000553171.1_1_12:53691669-53691972:+|nuORF;nc|ENSG00000123349|Q99471-3|PFDN5	73.84112541714126	0.20371746787051248	4				NaN	NaN	0	NaN	6529	3049	9573
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9598	26.72	NaN	8218.4	30	0	1139.2	0.214	+			15568	GVGEVLHVK	9	64	469.2773299753189	936.5401070174378	2	469.2769775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVGEVLHVK_	ENSG00000213676|ENST00000375203|ATF6B;ENST00000495579.5_1_6:32088425-32095984:-|nuORF;nc|ENSG00000213676|Q99941-2|ATF6B	87.69643885390035	0.07135982304947239	4				NaN	NaN	0	NaN	6544	3052	9597
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9599	26.724	NaN	13567	30	0	2382.7	0.106	+			15636	GVLGGYIQKK	10	72	531.8192858113255	1061.6240186894508	2	531.81982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GVLGGYIQKK_	ENSG00000139687|ENST00000267163|RB1;ENST00000525036.1_1_13:48877982-48934322:+|nuORF;RB1|p.L561Mfs*9|1|0.07|ENSG00000139687|chr13:48381428-48381432|CCTTG/-|frameshift_variant;RB1|p.V654Cfs*4|1|0.33|ENSG00000139687|chr13:48456343-48456343|A/-|frameshift_variant;RB1|p.Y529*|1|0.23|ENSG00000139687|chr13:48381334-48381335|AC/-|frameshift_variant;RB1|p.Y529Tfs*3|1|0.08|ENSG00000139687|chr13:48381329-48381329|T/-|frameshift_variant	74.25504064058377	0.24255678544297835	4				NaN	NaN	0	NaN	6545	3052	9597
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9600	26.726	NaN	7019.8	30	0	2891.7	0.106			+	-1	SMSRKQVSL	9	79	351.1905280575156	1050.5497547727468	3	351.1907958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_SM(Oxidation (M))SRKQVSL_	REV__ENSG00000096696|ENST00000379802|DSP;REV__nc|ENSG00000096696|P15924-2|DSP;REV__nc|ENSG00000096696|P15924-3|DSP	26.69291269510374	0.5537881896960711	4				NaN	NaN	0	NaN	6546	3052	9597
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9601	26.728	NaN	7250.9	30	0	796.87	0.106	+			8439	EARILCALY	9	69	526.2825788405623	1050.5506047479246	2	526.2830810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EARILCALY_	ENSG00000073605|ENST00000418519|GSDMB;nc|ENSG00000073605|Q8TAX9-1|GSDMB;nc|ENSG00000073605|Q8TAX9-2|GSDMB;nc|ENSG00000073605|Q8TAX9-3|GSDMB;nc|ENSG00000073605|Q8TAX9-5|GSDMB;nc|ENSG00000073605|Q8TAX9-6|GSDMB	62.107414245175825	0.1960472003779324	4				NaN	NaN	0	NaN	6547	3052	9597
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9602	26.73	NaN	3127.6	30	0	517.25	0.106				-1	SSPCHIEM	8	59	480.6996911269588	959.3848293207176	2	480.69940185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_SSPC(Carbamidomethyl (C))HIEM_	ENSG00000265681|ENST00000580261|RPL17;ENST00000414070.1_1_1:109535017-109535455:+|nuORF;ENST00000446498.1_1_1:26781156-26781564:-|nuORF;ENST00000452862.1_1_3:197577273-197577471:-|nuORF;ENST00000498256.1_1_8:29489773-29490157:+|nuORF;nc|ENSG00000265681|P18621-2|RPL17;nc|ENSG00000265681|P18621-3|RPL17	52.29916861842294	0.578018602984656	4				NaN	NaN	0	NaN	6548	3052	9597
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9603	26.732	NaN	7218.5	30	0	1214.2	0.04				-1	KHRRTMIISPE	11	72	692.3791919856077	1382.7438310380153	2	692.3784790039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_KHRRTM(Oxidation (M))IISPE_	ENSG00000115524|ENST00000335508|SF3B1;nc|ENSG00000115524|O75533-2|SF3B1;SF3B1|p.F815Lfs*19|1|0.14|ENSG00000115524|chr2:197401451-197401451|A/-|frameshift_variant	19.1035232394073	0.7810393085260824	4				NaN	NaN	0	NaN	6549	3052	9597
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9604	26.732	NaN	3166.3	30	0	432.26	0.143			+	22848	KVIKDLLNC	9	71	523.3062860388362	NaN	0	523.306396484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KVIKDLLNC_	REV__ASB17|p.N177Kfs*21|2|0.42|ENSG00000154007|chr1:75922230-75922231|-/T|frameshift_variant;REV__ASB17|p.N177Tfs*7|1|0.18|ENSG00000154007|chr1:75922231-75922231|T/-|frameshift_variant;REV__ENSG00000154007|ENST00000284142|ASB17	40.77816245573522	0.2702456086868081	4				NaN	NaN	0	NaN	6550	3052	9597
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9622	26.771	NaN	9810.7	30	0	1210.6	0.214	+			5568	AVAQLWGQKK	10	80	564.8302739391178	NaN	0	564.830322265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVAQLWGQKK_	ENSG00000163435|ENST00000367284|ELF3;ENST00000475698.1_1_1:201982922-201984448:+|nuORF;nc|ENSG00000163435|P78545-2|ELF3	146.78539889680295	0.002074480291371008	4				NaN	NaN	0	NaN	6565	3055	9621
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9623	26.775	NaN	4652.9	30	0	740.36	0.106			+	9013	EGAPWQSIL	9	68	500.7587418655053	999.5029307978107	2	500.7584533691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EGAPWQSIL_	REV__PIWIL4|p.V774Wfs*21|1|0.16|ENSG00000134627|chr11:94620021-94620021|G/-|frameshift_variant	54.776311868738084	0.25715957988447635	4				NaN	NaN	0	NaN	6566	3055	9621
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9624	26.777	NaN	6096	30	0	633.03	0.106	+			1966	AIYEPKTFK	9	65	548.8045532882969	1095.5945536433937	2	548.8055419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AIYEPKTFK_	ENSG00000242485|ENST00000344843|MRPL20	60.11826168202944	0.21262886028301267	4				NaN	NaN	0	NaN	6567	3055	9621
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9625	26.778	NaN	4139.6	30	0	412.09	0.106			+	23757	LCFGSHKPY	9	73	526.256592073995	1050.4986312147898	2	526.2570190429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LCFGSHKPY_	REV__ENSG00000143891|ENST00000272252|GALM	58.78195531508484	0.22376836668196862	4				NaN	NaN	0	NaN	6568	3055	9621
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9626	26.78	NaN	8512.1	30	0	1020.9	0.106	+			22667	KTYQDIQNTIK	11	86	676.3656843851974	1350.7168158371946	2	676.364501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KTYQDIQNTIK_	ENSG00000181222|ENST00000674977|POLR2A;nc|ENSG00000181222|P24928|POLR2A	99.6686872161799	0.061372053396575775	4				NaN	NaN	0	NaN	6569	3055	9621
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9627	26.782	NaN	4103.3	30	0	450.33	0.037			+	-1	QSCHKPLGPV	10	61	561.7903409846143	1121.5661290360285	2	561.7901000976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_QSC(Carbamidomethyl (C))HKPLGPV_	REV__nc|ENSG00000147789|P17097-3|ZNF7	37.81151784470057	0.569310847604193	4				NaN	NaN	0	NaN	6570	3055	9621
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9628	26.783	NaN	2848	30	0	303.37	0.14				-1	AKGMKSVLGL	10	60	510.29824533368486	1018.5819377341697	2	510.2980041503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_AKGM(Oxidation (M))KSVLGL_	ENST00000599417.1_1_19:39888354-39888441:+|nuORF	52.936696900407355	0.4300801048568001	4				NaN	NaN	0	NaN	6571	3055	9621
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9646	26.821	NaN	8863.5	30	0	1035.8	0.215	+			28416	NETQIKQAL	9	77	522.7880697505665	1043.5615865679329	2	522.7881469726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NETQIKQAL_	ARHGAP5|p.E893*|2|0.24|ENSG00000100852|chr14:32093338-32093339|-/T|frameshift_variant;ARHGAP5|p.F892Lfs*9|2|0.33|ENSG00000100852|chr14:32093339-32093339|T/-|frameshift_variant;ARHGAP5|p.F935Lfs*5|1|0.32|ENSG00000100852|chr14:32093469-32093469|T/-|frameshift_variant;ARHGAP5|p.N943Kfs*10|1|0.43|ENSG00000100852|chr14:32093489-32093490|-/A|frameshift_variant;ARHGAP5|p.S936*|1|0.32|ENSG00000100852|chr14:32093468-32093469|-/T|frameshift_variant;ENSG00000100852|ENST00000345122|ARHGAP5;nc|ENSG00000100852|Q13017-2|ARHGAP5	109.47833844074708	0.029530294723441826	4				NaN	NaN	0	NaN	6586	3058	9645
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9647	26.825	NaN	8680.5	30	0	2399.7	0.106			+	18514	ISKIDELKV	9	82	348.8813691844523	NaN	0	348.88140869140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ISKIDELKV_	REV__tr|U7T3B9|U7T3B9_FUSNUCompetenceproteinComECOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00372PE=4SV=1	67.49366992349736	0.1173583512313808	4				NaN	NaN	0	NaN	6587	3058	9645
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9648	26.827	NaN	10268	30	0	2759.4	0.106			+	30750	QDMMQYMAQ	9	85	573.2260438914594	1144.4375348497188	2	573.227294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QDMMQYMAQ_	REV__ENSG00000185515|ENST00000330045|BRCC3;REV__ENST00000453705.1_3_X:154299864-154348422:+|nuORF;REV__ENST00000508559.1_1_5:175735354-175735840:+|nuORF;REV__nc|ENSG00000185515|P46736-3|BRCC3;REV__nc|ENSG00000185515|P46736-4|BRCC3;REV__nc|ENSG00000185515|P46736-5|BRCC3;REV__nc|ENSG00000185515|P46736|BRCC3	60.97194046774394	0.20551255781574032	4				NaN	NaN	0	NaN	6588	3058	9645
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9649	26.829	NaN	3045.2	30	0	653	0.106				-1	GPRGPRLC	8	56	456.74511865278635	911.4756843723727	2	456.744873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_GPRGPRLC(Carbamidomethyl (C))_	ENST00000261716.7_1_17:27717627-27717714:+|nuORF	42.47446043378293	0.6409579893742323	4				NaN	NaN	0	NaN	6589	3058	9645
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9650	26.831	NaN	12375	30	0	1306.5	0.106	+			29323	NYQNVVHKL	9	77	557.8042120820103	1113.5938712308205	2	557.8043212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NYQNVVHKL_	ENSG00000146463|ENST00000314607|ZMYM4;nc|ENSG00000146463|Q5VZL5-2|ZMYM4;nc|ENSG00000146463|Q5VZL5-3|ZMYM4;nc|ENSG00000146463|Q5VZL5-4|ZMYM4;ZMYM4|p.A956Sfs*68|1|0.38|ENSG00000146463|chr1:35393690-35393691|-/A|frameshift_variant;ZMYM4|p.D1229Ifs*2|1|0.12|ENSG00000146463|chr1:35405175-35405175|G/-|frameshift_variant;ZMYM4|p.N1222Kfs*15|1|0.25|ENSG00000146463|chr1:35405154-35405155|-/A|frameshift_variant;ZMYM4|p.Y806Ifs*12|1|0.16|ENSG00000146463|chr1:35389058-35389059|-/A|frameshift_variant	132.757866228626	0.013877640931359021	4				NaN	NaN	0	NaN	6590	3058	9645
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9651	26.832	NaN	4713	30	0	270.33	0.037				-1	WSQVRPTPC	9	87	377.51843968635	1129.53348965925	3	377.51849365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_WSQVRPTPC(Carbamidomethyl (C))_	ENST00000517503.1_3_8:144103287-144103416:+|nuORF	30.317721548370564	0.5199124245378496	4				NaN	NaN	0	NaN	6591	3058	9645
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9652	26.833	NaN	4189.8	30	0	707.02	0.141			+	2377	ANHDLLIKV	9	71	341.5378031400754	NaN	0	341.5378112792969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ANHDLLIKV_	REV__ENSG00000183475|ENST00000332783|ASB7;REV__nc|ENSG00000183475|Q9H672-2|ASB7	32.75053402867276	0.3122164853807509	4				NaN	NaN	0	NaN	6592	3058	9645
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9670	26.872	NaN	251000	30	0	135390	0.214	+			6659	AYVHMVTHF	9	113	374.17929863527513	1119.5160665060255	3	374.1795654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_AYVHM(Oxidation (M))VTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	58.78195531508484	0.22376836668196862	4				NaN	NaN	0	NaN	6607	3061	9669
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9671	26.876	NaN	4971.6	30	0	552.98	0.106	+			36737	SGVSLAALKK	10	79	487.30461150369746	NaN	0	487.3050842285156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SGVSLAALKK_	ENSG00000124575|ENST00000244534|H1-3;ENSG00000168298|ENST00000304218|H1-4;ENSG00000187837|ENST00000343677|H1-2	109.43880257439609	0.012705359521079733	4				NaN	NaN	0	NaN	6608	3061	9669
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9672	26.878	NaN	4073.8	30	0	1056.8	0.106			+	-1	RMCGGLTPV	9	58	495.74591536146767	989.4772777897354	2	495.7452392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_RMC(Carbamidomethyl (C))GGLTPV_	REV__ENST00000264712.7_1_2:26204855-26205287:-|nuORF;REV__ENST00000405914.1_1_2:26204855-26205579:-|nuORF	42.396135135203025	0.392153681582562	4				NaN	NaN	0	NaN	6609	3061	9669
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9673	26.88	NaN	14607	30	0	4281.8	0.106	+			34810	RYLEKPMEI	9	90	398.87747484556553	1193.6105951368966	3	398.8775939941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_RYLEKPM(Oxidation (M))EI_	ENSG00000168610|ENST00000264657|STAT3;nc|ENSG00000168610|P40763-2|STAT3;nc|ENSG00000168610|P40763-3|STAT3;STAT3|p.R729Afs*3|2|0.33|ENSG00000168610|chr17:42316861-42316861|G/-|frameshift_variant	72.87924865735499	0.12833875048249987	4				NaN	NaN	0	NaN	6610	3061	9669
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9674	26.882	NaN	6484.6	30	0	2401.9	0.106	+			21688	KQELLRANM	9	69	551.8054809570312	NaN	0	551.8054809570312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KQELLRANM_	ENSG00000150764|ENST00000440460|DIXDC1;ENST00000526500.5_1_11:111859671-111889757:+|nuORF;nc|ENSG00000150764|Q155Q3-2|DIXDC1	27.047317107675042	0.34101084205454363	4				NaN	NaN	0	NaN	6611	3061	9669
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9675	26.883	NaN	3336.1	30	0	532.49	0.036			+	49773	VYQKRISY	8	61	528.7956631630702	1055.5767733929404	2	528.795654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VYQKRISY_	REV__ATP13A3|p.F1107Lfs*5|1|0.42|ENSG00000133657|chr3:194419960-194419960|A/-|frameshift_variant;REV__ATP13A3|p.I476Sfs*11|1|0.19|ENSG00000133657|chr3:194446998-194446998|T/-|frameshift_variant;REV__ATP13A3|p.L1114Ffs*17|1|0.25|ENSG00000133657|chr3:194419939-194419940|-/A|frameshift_variant;REV__ATP13A3|p.L1114Yfs*22|1|0.23|ENSG00000133657|chr3:194419940-194419940|A/-|frameshift_variant;REV__ATP13A3|p.P1198Lfs*19|1|0.04|ENSG00000133657|chr3:194406007-194406008|-/ATATAGTA|frameshift_variant;REV__ATP13A3|p.S1110Ffs*21|2|0.22|ENSG00000133657|chr3:194419952-194419953|-/A|frameshift_variant;REV__ATP13A3|p.V1108Cfs*23|1|0.26|ENSG00000133657|chr3:194419959-194419960|-/A|frameshift_variant;REV__ENSG00000133657|ENST00000645319|ATP13A3;REV__nc|ENSG00000133657|Q9H7F0|ATP13A3	45.97224482568171	0.6192535143389125	4				NaN	NaN	0	NaN	6612	3061	9669
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9676	26.884	NaN	8199.3	30	0	1255.4	0.143			+	21692	KQEPQLTLLLG	11	72	620.3689872388	1238.7234215443998	2	620.3690795898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KQEPQLTLLLG_	REV__ENSG00000177628|ENST00000368373|GBA1;REV__GBA|p.P138Lfs*62|1|0.09|ENSG00000177628|chr1:155239657-155239657|G/-|frameshift_variant;REV__nc|ENSG00000177628|P04062-2|GBA1;REV__nc|ENSG00000177628|P04062-4|GBA1	25.06778042989391	0.7268506242977556	4				NaN	NaN	0	NaN	6613	3061	9669
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9694	26.921	NaN	12241	30	0	2618.4	0.214	+			22407	KTIVFVETK	9	73	532.8211737792783	1063.6277946253565	2	532.8214111328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTIVFVETK_	DDX5|p.D424Ifs*31|1|0.03|ENSG00000108654|chr17:64500720-64500721|-/AAGCAATTAAT|frameshift_variant;DDX5|p.D572Nfs*6|1|0.04|ENSG00000108654|chr17:64500054-64500055|-/TGACAAGATAGTT|frameshift_variant;DDX5|p.R502Gfs*87|1|0.21|ENSG00000108654|chr17:64500264-64500264|T/-|frameshift_variant;ENSG00000108654|ENST00000225792|DDX5;ENST00000581230.5_1_17:62498125-62502378:-|nuORF;nc|ENSG00000108654|P17844-2|DDX5	183.72194652814687	0.000922403277147814	4				NaN	NaN	0	NaN	6628	3064	9693
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9695	26.924	NaN	10798	30	0	839.47	0.106	+			6661	AYVHMVTHF	9	74	560.7660324947457	1119.5175120562913	2	560.7660522460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_AYVHM(Oxidation (M))VTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	101.21157088398209	0.03796561369277615	4				NaN	NaN	0	NaN	6629	3064	9693
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9696	26.926	NaN	24452	30	0	4386.9	0.106	+			14860	GTLMWHQMK	9	86	574.2730949116061	1146.5316368900121	2	574.2733764648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_GTLM(Oxidation (M))WHQMK_	ENST00000346169.6_1_3:184032401-184033585:+|nuORF;ENST00000352767.7_2_3:184032446-184033585:+|nuORF	101.60071028292904	0.0375685401170269	4				NaN	NaN	0	NaN	6630	3064	9693
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9697	26.928	NaN	14037	30	0	2212.7	0.106	+			51480	YVHMVTHF	8	79	525.2475384387183	1048.4805239442364	2	525.2476196289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_YVHM(Oxidation (M))VTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	86.93460362436232	0.2867499496721195	4				NaN	NaN	0	NaN	6631	3064	9693
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9698	26.93	NaN	5151.8	30	0	676.63	0.106				-1	 	0	68	434.747486346104	867.480419759008	2	434.7476501464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6632	3064	9693
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9699	26.932	NaN	3040.1	30	0	444.69	0.034			+	-1	ESGPCARH	8	49	457.20250049351733	NaN	0	457.2030944824219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_ESGPC(Carbamidomethyl (C))ARH_	REV__ENST00000329021.9_1_22:42781096-42793874:-|nuORF	25.450171626174864	1.7418937515398478	4				NaN	NaN	0	NaN	6633	3064	9693
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9700	26.932	NaN	3779.3	30	0	551.92	0.141			+	51249	YQNNSVTSY	9	65	538.2388174686826	NaN	0	538.2376098632812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YQNNSVTSY_	REV__ENSG00000085982|ENST00000678225|USP40;REV__ENST00000427947.7_1_2:234462980-234475343:-|nuORF;REV__ENST00000484528.1_1_2:234465455-234475343:-|nuORF;REV__nc|ENSG00000085982|Q9NVE5-3|USP40;REV__nc|ENSG00000085982|Q9NVE5|USP40;REV__USP40|p.F846Lfs*16|1|0.24|ENSG00000085982|chr2:233510121-233510121|A/-|frameshift_variant;REV__USP40|p.N976Hfs*17|1|0.07|ENSG00000085982|chr2:233491251-233491252|-/TGATATGG|frameshift_variant	66.42927471994793	0.121898005645852	4				NaN	NaN	0	NaN	6634	3064	9693
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9718	26.971	NaN	20528	30	0	3870.4	0.214				-1	 	0	94	322.193444821234	642.372336709268	2	322.19354248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6649	3067	9717
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9719	26.975	NaN	4990.3	30	0	482.68	0.106			+	26317	LSVSSVPVSDQ	11	68	559.2905520467056	1116.566551160211	2	559.2906494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSVSSVPVSDQ_	REV__ENSG00000134909|ENST00000682385|ARHGAP32;REV__nc|ENSG00000134909|A7KAX9-2|ARHGAP32;REV__nc|ENSG00000134909|A7KAX9|ARHGAP32	109.47833844074708	0.04109199359384862	4				NaN	NaN	0	NaN	6650	3067	9717
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9720	26.977	NaN	5139.2	30	0	741.14	0.106	+			32208	QTACHVGG	8	75	386.67437185772786	771.3341907822557	2	386.6744384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QTACHVGG_	sp|P16786|UL49_HCMVAUncharacterizedproteinUL49OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL49PE=3SV=1;sp|Q6SW82|UL49_HCMVMProteinUL49OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL49PE=3SV=1	40.5726180659479	0.6527593143185008	4				NaN	NaN	0	NaN	6651	3067	9717
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9721	26.978	NaN	3261.1	30	0	356.01	0.106	+			33905	RRRSVAVY	8	79	336.2013529747167	1005.5822295243502	3	336.5340270996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RRRSVAVY_	ENSG00000112936|ENST00000313164|C7	21.70233525837049	0.7917639344264583	4				NaN	NaN	0	NaN	6652	3067	9717
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9722	26.98	NaN	7095.6	30	0	567.49	0.106	+			941	AEIQGNINKV	10	70	543.3010726474607	1084.5875923617214	2	543.301513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEIQGNINKV_	ENSG00000140575|ENST00000268182|IQGAP1;ENSG00000145703|ENST00000274364|IQGAP2;IQGAP1|p.N941Ifs*8|1|0.43|ENSG00000140575|chr15:90476693-90476693|A/-|frameshift_variant;IQGAP1|p.S1529Afs*10|1|0.15|ENSG00000140575|chr15:90492665-90492665|A/-|frameshift_variant;IQGAP2|p.K608Nfs*42|1|0.36|ENSG00000145703|chr5:76637072-76637072|A/-|frameshift_variant;IQGAP2|p.Q1499Rfs*15|1|0.05|ENSG00000145703|chr5:76701201-76701202|-/CCGAG|frameshift_variant;IQGAP2|p.T881Hfs*2|2|0.3|ENSG00000145703|chr5:76665133-76665133|A/-|frameshift_variant	93.5975768576971	0.11047702954938905	4				NaN	NaN	0	NaN	6653	3067	9717
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9723	26.982	NaN	4651	30	0	705.31	0.038				-1	LVSKEDEEFC	10	58	628.2765718909945	NaN	0	628.2764282226562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_LVSKEDEEFC(Carbamidomethyl (C))_	ENSG00000136478|ENST00000584379|TEX2;nc|ENSG00000136478|Q8IWB9-2|TEX2;TEX2|p.L796Cfs*29|1|0.25|ENSG00000136478|chr17:64188206-64188206|G/-|frameshift_variant;TEX2|p.S903Vfs*17|1|0.22|ENSG00000136478|chr17:64160898-64160899|-/C|frameshift_variant	29.170058357718403	0.40439580130713204	4				NaN	NaN	0	NaN	6654	3067	9717
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9724	26.983	NaN	2099.1	30	0	214.3	0.142			+	43914	TPAALDLNK	9	48	471.7664374269519	941.5183219207038	2	471.7659912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TPAALDLNK_	REV__ENSG00000161714|ENST00000619929|PLCD3	30.503639358989545	0.5181749237905803	4				NaN	NaN	0	NaN	6655	3067	9717
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9740	27.016	NaN	19006	30	0	7701.5	0.214	+			14977	GTMTGMLYK	9	69	509.2406460075381	1016.4667390818762	2	509.2405090332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_GTMTGM(Oxidation (M))LYK_	ENSG00000178440|ENST00000651763|TIMM23B-AGAP6;ENSG00000204152|ENST00000651259|TIMM23B;ENSG00000265354|ENST00000580018|TIMM23;nc|ENSG00000204152|Q5SRD1-2|TIMM23B	118.74307786436346	0.02196067127630568	4				NaN	NaN	0	NaN	6668	3070	9739
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9741	27.02	NaN	6655.8	30	0	418.22	0.106	+			12794	GELVALKKV	9	71	478.8103471750253	NaN	0	478.810302734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GELVALKKV_	CDK12|p.G1271Dfs*23|2|0.26|ENSG00000167258|chr17:39530648-39530648|C/-|frameshift_variant;CDK12|p.P1267Lfs*27|1|0.33|ENSG00000167258|chr17:39530639-39530639|C/-|frameshift_variant;CDK12|p.Q937Kfs*9|1|0.2|ENSG00000167258|chr17:39515766-39515766|T/-|frameshift_variant;ENSG00000167258|ENST00000447079|CDK12;nc|ENSG00000167258|Q9NYV4-2|CDK12;nc|ENSG00000167258|Q9NYV4-3|CDK12	85.16082228582465	0.053699699744190164	4				NaN	NaN	0	NaN	6669	3070	9739
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9742	27.022	NaN	6098.4	30	0	720.75	0.106				-1	IRATTMCCL	9	63	534.7532130747383	1067.4918732162764	2	534.7534790039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_IRATTMC(Carbamidomethyl (C))CL_	ZFHX3|p.A1428T|1|0.12|ENSG00000140836|chr16:72798400-72798400|C/T|missense_variant	35.61828744233558	0.47037581924408073	4				NaN	NaN	0	NaN	6670	3070	9739
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9743	27.023	NaN	4583.7	30	0	539.8	0.106	+			4974	ATQVAVSVPK	10	66	500.295621495567	998.576690057934	2	500.2947082519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATQVAVSVPK_	EIF4G1|p.P1229Qfs*2|1|0.18|ENSG00000114867|chr3:184327606-184327606|C/-|frameshift_variant;ENSG00000114867|ENST00000346169|EIF4G1;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1	72.2432373244024	0.2589930451692646	4				NaN	NaN	0	NaN	6671	3070	9739
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9744	27.025	NaN	2422.4	30	0	217.34	0.106				-1	 	0	71	375.1642890744019	374.1570126078019	1	377.17816162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6672	3070	9739
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9745	27.027	NaN	5939	30	0	1432.7	0.037			+	9717	EMNKHQSVY	9	64	568.2623687021995	1134.510184471199	2	568.2626342773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EMNKHQSVY_	REV__tr|U7SM56|U7SM56_FUSNUCoA-substrate-specificenzymeactivaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02088PE=4SV=1	40.77816245573522	0.41113185337114944	4				NaN	NaN	0	NaN	6673	3070	9739
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9746	27.028	NaN	2046.6	30	0	749.23	0.14				-1	SMCKRMMPH	9	52	393.1731872558594	NaN	0	393.1731872558594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_SMC(Carbamidomethyl (C))KRMMPH_	ENSG00000065485|ENST00000316218|PDIA5;nc|ENSG00000065485|Q14554-2|PDIA5	20.94693142431847	0.3660861156085067	4				NaN	NaN	0	NaN	6674	3070	9739
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9764	27.065	NaN	10089	30	0	1689.7	0.214	+			14331	GSYSLEEPK	9	71	505.2453690313206	1008.4761851294412	2	505.24542236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSYSLEEPK_	ENSG00000115884|ENST00000254351|SDC1;SDC1|p.E283K|1|0.33|ENSG00000115884|chr2:20202852-20202852|C/T|missense_variant	95.81516180277367	0.04847050768394289	4				NaN	NaN	0	NaN	6689	3073	9763
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9765	27.069	NaN	5678.5	30	0	1133	0.106	+			36426	SETTKGAYSL	10	68	528.7637078501169	1055.5128627670338	2	528.7645263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SETTKGAYSL_	ENSG00000000938|ENST00000374005|FGR;ENSG00000010810|ENST00000354650|FYN;ENSG00000176105|ENST00000314574|YES1;ENST00000418510.1_1_22:26043331-26044389:+|nuORF;FYN|p.D506Gfs*3|1|0.19|ENSG00000010810|chr6:111661838-111661839|-/T|frameshift_variant;nc|ENSG00000010810|P06241-2|FYN;nc|ENSG00000010810|P06241-3|FYN	72.2432373244024	0.2589930451692646	4				NaN	NaN	0	NaN	6690	3073	9763
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9766	27.071	NaN	3075.4	30	0	225.87	0.106	+			46562	VFIQTDKPV	9	82	349.5334779923663	1045.5786045772988	3	349.53326416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VFIQTDKPV_	CPAMD8|p.H1052Afs*30|1|0.33|ENSG00000160111|chr19:16929073-16929074|-/C|frameshift_variant;CPAMD8|p.H1052Ifs*127|3|0.34|ENSG00000160111|chr19:16929074-16929074|C/-|frameshift_variant;CPAMD8|p.H593Lfs*4|1|0.13|ENSG00000160111|chr19:16977489-16977489|T/-|frameshift_variant;CPAMD8|p.M1571Cfs*32|1|0.32|ENSG00000160111|chr19:16902765-16902765|G/-|frameshift_variant;ENSG00000160111|ENST00000443236|CPAMD8;nc|ENSG00000160111|Q8IZJ3-2|CPAMD8	24.20275056022122	0.577060078256802	4				NaN	NaN	0	NaN	6691	3073	9763
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9767	27.073	NaN	3233.4	30	0	662.4	0.106	+			7321	DASVGLWK	8	59	438.23421792827855	874.4538829233571	2	438.23443603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DASVGLWK_	ENSG00000134531|ENST00000256951|EMP1;nc|ENSG00000134531|P54849-2|EMP1	31.954861631926434	0.7126016770032289	4				NaN	NaN	0	NaN	6692	3073	9763
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9768	27.074	NaN	4583.6	30	0	528.48	0.106			+	8707	EEDDEGYQAY	10	53	609.7263339270286	NaN	0	609.7261962890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EEDDEGYQAY_	REV__ENSG00000108819|ENST00000612501|PPP1R9B	15.641811463095205	0.4201028297492154	4				NaN	NaN	0	NaN	6693	3073	9763
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9769	27.076	NaN	4751.7	30	0	931.24	0.038				-1	CSCGGMDYTAY	11	55	614.2103881835938	NaN	0	614.2103881835938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_C(Carbamidomethyl (C))SCGGMDYTAY_	ENST00000423059.8_2_7:11676488-11676560:-|nuORF	18.262085536374414	0.456735970842152	4				NaN	NaN	0	NaN	6694	3073	9763
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9770	27.077	NaN	3126.7	30	0	497.03	0.141			+	-1	QGCACPLAGPE	11	56	551.7364501953125	NaN	0	551.7364501953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_QGC(Carbamidomethyl (C))ACPLAGPE_	REV__ENSG00000007545|ENST00000397412|CRAMP1	32.81241826257853	0.4191849651971536	4				NaN	NaN	0	NaN	6695	3073	9763
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9786	27.112	NaN	17739	30	0	1460.8	0.214			+	8091	DWISYTLEQ	9	86	577.7704410801874	1153.5263292271748	2	577.770751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DWISYTLEQ_	REV__ENSG00000174358|ENST00000304460|SLC6A19	72.87924865735499	0.12833875048249987	4				NaN	NaN	0	NaN	6708	3076	9785
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9787	27.115	NaN	6627.4	30	0	754.16	0.106	+			18988	IVSTSQVPIP	10	97	347.5374941592638	1039.5906530779914	3	347.53753662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IVSTSQVPIP_	ENSG00000169894|ENST00000379458|MUC3A;nc|ENSG00000169894|Q02505-2|MUC3A;nc|ENSG00000169894|Q02505-3|MUC3A;nc|ENSG00000169894|Q02505-4|MUC3A;nc|ENSG00000169894|Q02505-5|MUC3A	42.396135135203025	0.5270658956260207	4				NaN	NaN	0	NaN	6709	3076	9785
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9788	27.117	NaN	6157.5	30	0	769.92	0.106			+	50327	WTPTPPLMQ	9	65	535.7693477104963	1069.5241424877925	2	535.7697143554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_WTPTPPLMQ_	REV__ENSG00000116691|ENST00000235332|MIIP;REV__ENST00000460823.1_1_1:12091688-12091862:+|nuORF;REV__ENST00000466860.5_1_1:12090076-12091862:+|nuORF;REV__ENST00000478299.1_1_1:12091250-12091862:+|nuORF;REV__ENST00000498685.5_1_1:12089781-12091862:+|nuORF	40.77816245573522	0.41113185337114944	4				NaN	NaN	0	NaN	6710	3076	9785
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9789	27.119	NaN	6881.3	30	0	1445.1	0.106	+			50008	WAVTVAAKALG	11	77	543.8169047786594	1085.6192566241186	2	543.8173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_WAVTVAAKALG_	tr|U7T636|U7T636_FUSNUPhageproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00088PE=4SV=1	32.81241826257853	0.645615689454792	4				NaN	NaN	0	NaN	6711	3076	9785
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9790	27.121	NaN	3195.5	30	0	549.06	0.106	+			10782	FAGPHSTL	8	59	415.21374665751637	NaN	0	415.213623046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FAGPHSTL_	ENSG00000106266|ENST00000222990|SNX8;ENST00000480807.1_1_7:2294693-2297236:-|nuORF	79.9392285194092	1.7418937515398478	4				NaN	NaN	0	NaN	6712	3076	9785
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9791	27.123	NaN	3561.3	30	0	707.67	0.035	+			1051	AEKQLENSL	9	71	516.272474807693	NaN	0	516.27197265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEKQLENSL_	ENSG00000113407|ENST00000265112|TARS1;ENST00000509410.1_1_5:33461160-33466106:+|nuORF;nc|ENSG00000113407|P26639-2|TARS1	70.39856735676683	0.10496893946726124	4				NaN	NaN	0	NaN	6713	3076	9785
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9792	27.123	NaN	4011.4	30	0	791.39	0.142				-1	KMCKCHHQ	8	59	572.7453886881214	1143.4762244430426	2	572.7453002929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C),Oxidation (M)	_KM(Oxidation (M))C(Carbamidomethyl (C))KC(Carbamidomethyl (C))HHQ_	LRRN3|p.C606Mfs*12|1|0.27|ENSG00000173114|chr7:111124580-111124581|-/A|frameshift_variant	19.359975847455235	0.7988239741663654	4				NaN	NaN	0	NaN	6714	3076	9785
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9810	27.163	NaN	46926	30	0	12083	0.214	+			8773	EEIAKVEKL	9	82	353.54101609217366	1057.601218876721	3	353.54132080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EEIAKVEKL_	ENSG00000170348|ENST00000303575|TMED10;ENST00000555036.1_1_14:75602424-75614456:-|nuORF;ENST00000556969.5_1_14:75601590-75614465:-|nuORF	33.921630207806714	0.48623198279849766	4				NaN	NaN	0	NaN	6729	3079	9809
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9811	27.166	NaN	10940	30	0	1549.6	0.106				-1	 	0	82	386.7392733362173	771.4639937392346	2	386.7393798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6730	3079	9809
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9812	27.168	NaN	5137.1	30	0	1549	0.106			+	32104	QSGVALLAGL	10	59	464.7770696865816	927.5395864399633	2	464.7765197753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QSGVALLAGL_	REV__ENSG00000175121|ENST00000372789|WFDC5;REV__nc|ENSG00000175121|Q8TCV5|WFDC5	40.77816245573522	0.5419747034533848	4				NaN	NaN	0	NaN	6731	3079	9809
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9813	27.17	NaN	8811.4	30	0	1068.2	0.106	+			4548	ATLDIDGVRK	10	73	544.3102968925509	1086.6060408519018	2	544.3095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATLDIDGVRK_	ENSG00000171723|ENST00000478722|GPHN;MPP5-GPHN|1|fusion;MPP5-GPHN|2|fusion;MPP5-GPHN|7|fusion;MPP5-GPHN|8|fusion;nc|ENSG00000171723|Q9NQX3|GPHN	70.41160668669231	0.27395730963879994	4				NaN	NaN	0	NaN	6732	3079	9809
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9814	27.172	NaN	4792.1	30	0	1356.5	0.106	+			8774	EEIAKVEKL	9	66	529.8082336496403	1057.6019143660806	2	529.808837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EEIAKVEKL_	ENSG00000170348|ENST00000303575|TMED10;ENST00000555036.1_1_14:75602424-75614456:-|nuORF;ENST00000556969.5_1_14:75601590-75614465:-|nuORF	80.45461616416974	0.09558281504443908	4				NaN	NaN	0	NaN	6733	3079	9809
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9815	27.174	NaN	26304	30	0	3642.4	0.035	+			34266	RTIAPIIGR	9	87	332.88171669940687	995.6233206984207	3	332.8818664550781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RTIAPIIGR_	CDC5L|p.K219Sfs*24|1|0.25|ENSG00000096401|chr6:44403919-44403919|A/-|frameshift_variant;CDC5L|p.K271Nfs*4|1|0.18|ENSG00000096401|chr6:44406376-44406377|-/C|frameshift_variant;CDC5L|p.Q359Cfs*22|1|0.06|ENSG00000096401|chr6:44408614-44408615|-/TG|frameshift_variant;CDC5L|p.Y225Mfs*18|1|0.1|ENSG00000096401|chr6:44403938-44403938|T/-|frameshift_variant;ENSG00000096401|ENST00000371477|CDC5L	35.15202426646627	0.4747332964206883	4				NaN	NaN	0	NaN	6734	3079	9809
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9816	27.174	NaN	4153.8	30	0	663.47	0.141	+			47046	VLFAGQHISK	10	73	550.3169554845462	1098.6193580358922	2	550.3170166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VLFAGQHISK_	ENSG00000136068|ENST00000295956|FLNB;FLNB|p.A832Rfs*9|1|0.26|ENSG00000136068|chr3:58111795-58111796|-/C|frameshift_variant;FLNB|p.G1596Vfs*33|1|0.36|ENSG00000136068|chr3:58136090-58136090|G/-|frameshift_variant;FLNB|p.G531Dfs*42|3|0.4|ENSG00000136068|chr3:58104061-58104061|G/-|frameshift_variant;FLNB|p.H532Tfs*9|1|0.31|ENSG00000136068|chr3:58104060-58104061|-/G|frameshift_variant;FLNB|p.N453Kfs*26|1|0.31|ENSG00000136068|chr3:58102212-58102213|-/A|frameshift_variant;nc|ENSG00000136068|O75369-2|FLNB;nc|ENSG00000136068|O75369-3|FLNB;nc|ENSG00000136068|O75369-4|FLNB;nc|ENSG00000136068|O75369-5|FLNB;nc|ENSG00000136068|O75369-6|FLNB;nc|ENSG00000136068|O75369-7|FLNB;nc|ENSG00000136068|O75369-8|FLNB;nc|ENSG00000136068|O75369-9|FLNB	67.21430809963624	0.30022695875429783	4				NaN	NaN	0	NaN	6735	3079	9809
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9834	27.214	NaN	30189	30	0	18733	0.214			+	2762	ARKDRCKSR	9	83	560.3119369472773	1118.6093209613546	2	560.3118896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ARKDRCKSR_	REV__ENSG00000006652|ENST00000403825|IFRD1;REV__ENST00000489994.5_1_7:112107978-112115571:+|nuORF;REV__nc|ENSG00000288640|O00458-2|IFRD1	111.64827973302667	0.027316110422332632	4				NaN	NaN	0	NaN	6750	3082	9833
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9835	27.217	NaN	10171	30	0	1282.3	0.106	+			15451	GTYVGLTCK	9	76	499.75265715592076	997.4907613786415	2	499.7522888183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GTYVGLTC(Carbamidomethyl (C))K_	ENSG00000221926|ENST00000649191|TRIM16;nc|ENSG00000221926|O95361-2|TRIM16;nc|ENSG00000291110|Q309B1|TRIM16L	78.26377905018397	0.10505600812668463	4				NaN	NaN	0	NaN	6751	3082	9833
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9836	27.219	NaN	12861	30	0	1880.6	0.106	+			31410	QKLKETQSKY	10	79	626.8483956392167	1251.6822383452334	2	626.8485107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QKLKETQSKY_	ENSG00000039560|ENST00000265109|RAI14;nc|ENSG00000039560|Q9P0K7-2|RAI14;nc|ENSG00000039560|Q9P0K7-3|RAI14;nc|ENSG00000039560|Q9P0K7-4|RAI14;RAI14|p.Q938Tfs*22|1|0.35|ENSG00000039560|chr5:34829743-34829744|AC/-|frameshift_variant	40.05817265558897	0.5486090488315611	4				NaN	NaN	0	NaN	6752	3082	9833
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9837	27.221	NaN	8811.2	30	0	4096.4	0.106	+			32483	QVNDLFSRK	9	65	553.801777036974	1105.589001140748	2	553.8016357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QVNDLFSRK_	ENSG00000174428|ENST00000472837|GTF2IRD2B;ENSG00000196275|ENST00000451013|GTF2IRD2;ENSG00000263001|ENST00000573035|GTF2I;ENST00000544802.5_1_7:72593260-72619478:+|nuORF;GTF2IRD2|p.F606Sfs*8|1|0.44|ENSG00000196275|chr7:74797697-74797697|G/-|frameshift_variant;nc|ENSG00000196275|Q86UP8-3|GTF2IRD2;nc|ENSG00000263001|P78347-2|GTF2I;nc|ENSG00000263001|P78347-3|GTF2I;nc|ENSG00000263001|P78347-4|GTF2I	70.8162118820467	0.13725933411854815	4				NaN	NaN	0	NaN	6753	3082	9833
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9838	27.223	NaN	4489.6	30	0	438.65	0.106	+			43237	TEVQLQQKV	9	67	536.8036963445973	NaN	0	536.8040161132812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TEVQLQQKV_	ENSG00000173230|ENST00000614479|GOLGB1;GOLGB1|p.D2495Tfs*21|1|0.22|ENSG00000173230|chr3:121691867-121691867|T/-|frameshift_variant;GOLGB1|p.K2450Rfs*27|1|0.37|ENSG00000173230|chr3:121692000-121692000|T/-|frameshift_variant;nc|ENSG00000173230|Q14789-2|GOLGB1;nc|ENSG00000173230|Q14789-3|GOLGB1;nc|ENSG00000173230|Q14789-4|GOLGB1;nc|ENSG00000173230|Q14789|GOLGB1	114.85826248499774	0.0053097169743072554	4				NaN	NaN	0	NaN	6754	3082	9833
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9839	27.225	NaN	5998.4	30	0	1337.9	0.029				-1	 	0	110	278.18435118217815	NaN	0	278.1842956542969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6755	3082	9833
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9840	27.225	NaN	4799.5	30	0	1270.1	0.143			+	51484	YVHQWHQCG	9	65	607.7630004882812	NaN	0	607.7630004882812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_YVHQWHQC(Carbamidomethyl (C))G_	REV__HELB|p.R906C|1|0.13|ENSG00000127311|chr12:66331199-66331199|C/T|missense_variant	50.0245360154114	0.20652386741182333	4				NaN	NaN	0	NaN	6756	3082	9833
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9858	27.264	NaN	42119	30	0	18330	0.214	+			6660	AYVHMVTHF	9	97	374.17929863527513	1119.5160665060255	3	374.1796569824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_AYVHM(Oxidation (M))VTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	66.42927471994793	0.16001998865088202	4				NaN	NaN	0	NaN	6771	3085	9857
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9859	27.267	NaN	19524	30	0	1044.3	0.106			+	49314	VVRHYMPKL	9	86	571.8287613414096	1141.6429697496192	2	571.8289184570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVRHYMPKL_	REV__ENSG00000137273|ENST00000645481|FOXF2	87.69643885390035	0.07135982304947239	4				NaN	NaN	0	NaN	6772	3085	9857
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9860	27.269	NaN	17215	30	0	1586.2	0.106	+			50743	YEKGGILKV	9	102	336.2013529747167	1005.5822295243502	3	336.2025146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YEKGGILKV_	ENSG00000187097|ENST00000334696|ENTPD5	54.776311868738084	0.25715957988447635	4				NaN	NaN	0	NaN	6773	3085	9857
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9861	27.271	NaN	4310.8	30	0	737.54	0.106	+			25920	LSGSNAGITSI	11	63	510.2724762299711	1018.5303995267423	2	510.2720642089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSGSNAGITSI_	ATG16L1|p.I471Cfs*34|1|0.04|ENSG00000085978|chr2:233290333-233290334|-/TGCAAAC|frameshift_variant;ENSG00000085978|ENST00000392017|ATG16L1;ENST00000472242.1_1_2:234186198-234191411:+|nuORF;ENST00000479942.5_1_2:234160473-234198706:+|nuORF;nc|ENSG00000085978|Q676U5-2|ATG16L1;nc|ENSG00000085978|Q676U5-3|ATG16L1;nc|ENSG00000085978|Q676U5-5|ATG16L1	61.76455937419982	0.30770400073182314	4				NaN	NaN	0	NaN	6774	3085	9857
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9862	27.273	NaN	7172.8	30	0	653.95	0.106	+			40825	SVEERITQVAK	11	78	630.3515245887246	1258.688496244249	2	630.3514404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVEERITQVAK_	CHD4|p.L1404Ffs*9|1|0.42|ENSG00000111642|chr12:6582872-6582873|-/A|frameshift_variant;CHD4|p.N1569Ifs*9|1|0.44|ENSG00000111642|chr12:6581364-6581364|T/-|frameshift_variant;CHD5|p.P1887Rfs*14|1|0.5|ENSG00000116254|chr1:6106698-6106698|G/-|frameshift_variant;ENSG00000111642|ENST00000544040|CHD4;ENSG00000116254|ENST00000262450|CHD5;ENSG00000170004|ENST00000330494|CHD3;nc|ENSG00000111642|Q14839-2|CHD4;nc|ENSG00000170004|Q12873-2|CHD3;nc|ENSG00000170004|Q12873-3|CHD3	77.53327743719008	0.17293716712445248	4				NaN	NaN	0	NaN	6775	3085	9857
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9863	27.275	NaN	2476.9	30	0	317.22	0.035			+	32802	RATPAKKPK	9	64	498.8195187931706	995.6244846531412	2	498.8192443847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RATPAKKPK_	REV__ENSG00000204843|ENST00000628224|DCTN1	24.519189625965996	0.574102787014149	4				NaN	NaN	0	NaN	6776	3085	9857
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9864	27.275	NaN	9624.1	30	0	1920.4	0.139	+			41011	SVGSLFVKK	9	68	482.7950360138456	963.5755190944913	2	482.79461669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVGSLFVKK_	ENSG00000176273|ENST00000427197|SLC35G1;nc|ENSG00000176273|Q2M3R5-2|SLC35G1;SLC35G1|p.S209Kfs*34|1|0.05|ENSG00000176273|chr10:93901016-93901017|-/AAGCATAG|frameshift_variant;SLC35G1|p.V92Cfs*7|2|0.27|ENSG00000176273|chr10:93898660-93898660|A/-|frameshift_variant	154.1183686248401	0.005909203230691971	4				NaN	NaN	0	NaN	6777	3085	9857
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9882	27.315	NaN	6192	30	0	944.04	0.214	+			20482	KEYGQTMTV	9	65	528.7550310281788	1055.4955091231575	2	528.75537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEYGQTMTV_	ENSG00000117595|ENST00000367021|IRF6;nc|ENSG00000117595|O14896-2|IRF6	90.60085204095205	0.06317133949006545	4				NaN	NaN	0	NaN	6792	3088	9881
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9883	27.318	NaN	10724	30	0	1229.5	0.106	+			48398	VTIFIRGGNK	10	71	552.8302485831865	1103.645944233173	2	552.8301391601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTIFIRGGNK_	ENSG00000150753|ENST00000280326|CCT5;ENST00000423695.6_1_5:10250480-10261980:+|nuORF;nc|ENSG00000150753|P48643-2|CCT5	106.88024417677582	0.05726438866303799	4				NaN	NaN	0	NaN	6793	3088	9881
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9884	27.32	NaN	4328.1	30	0	1579.9	0.106			+	28537	NILLPQQLQ	9	58	533.8166190860006	1065.6186852388012	2	533.8165283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NILLPQQLQ_	REV__ENSG00000054654|ENST00000555002|SYNE2;REV__nc|ENSG00000054654|Q8WXH0|SYNE2;REV__SYNE2|p.A5240Qfs*5|1|0.07|ENSG00000054654|chr14:64152639-64152639|G/-|frameshift_variant;REV__SYNE2|p.F4992Lfs*13|1|0.39|ENSG00000054654|chr14:64140067-64140067|T/-|frameshift_variant;REV__SYNE2|p.L5308Ifs*18|1|0.12|ENSG00000054654|chr14:64158750-64158751|GG/-|frameshift_variant;REV__SYNE2|p.S6651Rfs*83|1|0.29|ENSG00000054654|chr14:64220596-64220597|-/G|frameshift_variant	45.9519527083369	0.35044536499095585	4				NaN	NaN	0	NaN	6794	3088	9881
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9885	27.322	NaN	5458.5	30	0	769.23	0.106	+			1914	AIQNPTMINK	10	72	565.3054708050538	1128.5963886769075	2	565.30517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AIQNPTMINK_	ENSG00000167182|ENST00000376741|SP2;nc|ENSG00000167182|Q02086-2|SP2	86.18897241530135	0.15289278403033058	4				NaN	NaN	0	NaN	6795	3088	9881
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9886	27.324	NaN	6344.7	30	0	641.51	0.106	+			46052	VCFPQIKLEY	10	72	620.3267922950065	1238.639031656813	2	620.3272705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VCFPQIKLEY_	ENST00000358120.2_1_1:248261979-248262807:+|nuORF	32.81241826257853	0.6118718159329168	4				NaN	NaN	0	NaN	6796	3088	9881
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9887	27.326	NaN	6029.7	30	0	930.82	0.038	+			2737	AQYSPQQLAGK	11	76	595.8123593675107	1189.6101658018213	2	595.8126220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AQYSPQQLAGK_	ENSG00000112972|ENST00000325110|HMGCS1;ENST00000508319.1_1_5:43294149-43294911:-|nuORF	96.0336014099291	0.0740748020614995	4				NaN	NaN	0	NaN	6797	3088	9881
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9888	27.326	NaN	4385.8	30	0	430.31	0.141	+			6552	AYIQGLKEK	9	62	525.3033426696261	1048.592132406052	2	525.8046264648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AYIQGLKEK_	ENSG00000042445|ENST00000295802|RETSAT;ENST00000482694.1_1_2:85577073-85578124:-|nuORF;nc|ENSG00000042445|Q6NUM9-2|RETSAT;RETSAT|p.G295Vfs*12|1|0.2|ENSG00000042445|chr2:85349497-85349497|C/-|frameshift_variant	44.377184641726394	0.36891676396732553	4				NaN	NaN	0	NaN	6798	3088	9881
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9906	27.366	NaN	36594	30	0	3165.3	0.214	+			6219	AVQTAAKELLK	11	100	586.3563317281646	1170.6981105231291	2	586.3562622070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVQTAAKELLK_	ENSG00000123992|ENST00000273075|DNPEP;ENST00000430206.5_1_2:220251659-220252065:-|nuORF;ENST00000460963.5_1_2:220250088-220252486:-|nuORF;ENST00000523527.5_1_2:220250965-220252516:-|nuORF;nc|ENSG00000123992|Q9ULA0-2|DNPEP	150.51114518739402	6.966102168539024E-05	4				NaN	NaN	0	NaN	6813	3091	9905
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9907	27.369	NaN	20382	30	0	3539.8	0.106	+			18552	ISNEVLLSLPR	11	81	414.2466692433661	1239.7181783302983	3	414.2469177246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ISNEVLLSLPR_	ENSG00000139636|ENST00000267102|LMBR1L;ENST00000547670.5_1_12:49494396-49503620:-|nuORF;ENST00000550867.5_1_12:49494935-49504419:-|nuORF;ENST00000553204.5_1_12:49497576-49504308:-|nuORF;LMBR1L|p.L118Sfs*39|1|0.36|ENSG00000139636|chr12:49104532-49104532|A/-|frameshift_variant;nc|ENSG00000139636|Q6UX01-2|LMBR1L;nc|ENSG00000139636|Q6UX01-3|LMBR1L;nc|ENSG00000139636|Q6UX01-4|LMBR1L;nc|ENSG00000139636|Q6UX01-5|LMBR1L	34.50088687433636	0.6279050307224145	4				NaN	NaN	0	NaN	6814	3091	9905
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9908	27.371	NaN	12523	30	0	2442.9	0.106	+			37150	SITTVQIQK	9	67	509.30074046962466	1016.5869280060493	2	509.3006896972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SITTVQIQK_	ENST00000394091.5_1_3:101177876-101232004:-|nuORF	158.07458414430337	0.004987072822166904	4				NaN	NaN	0	NaN	6815	3091	9905
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9909	27.373	NaN	8358.8	30	0	1111.6	0.106	+			1915	AIQNPTMINK	10	75	565.3054708050538	1128.5963886769075	2	565.3056030273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AIQNPTMINK_	ENSG00000167182|ENST00000376741|SP2;nc|ENSG00000167182|Q02086-2|SP2	128.51354385984777	0.015305610523191824	4				NaN	NaN	0	NaN	6816	3091	9905
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9910	27.375	NaN	7742.2	30	0	2267.7	0.106	+			4857	ATPLDFPSKK	10	69	552.3087849954599	1102.6030170577196	2	552.3090209960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATPLDFPSKK_	ENSG00000168066|ENST00000377390|SF1;ENST00000463343.1_1_11:64543889-64545891:-|nuORF;ENST00000482693.1_1_11:64540804-64545891:-|nuORF;nc|ENSG00000168066|Q15637-2|SF1;nc|ENSG00000168066|Q15637-3|SF1;nc|ENSG00000168066|Q15637-4|SF1;nc|ENSG00000168066|Q15637-6|SF1;SF1|p.P74Lfs*63|1|0.43|ENSG00000168066|chr11:64773445-64773445|G/-|frameshift_variant;SF1|p.S182Lfs*2|1|0.29|ENSG00000168066|chr11:64769552-64769552|C/-|frameshift_variant;SF1|p.V573Sfs*23|1|0.22|ENSG00000168066|chr11:64766025-64766025|G/-|frameshift_variant	48.601550744091256	0.46988609897316763	4				NaN	NaN	0	NaN	6817	3091	9905
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9911	27.377	NaN	4061.6	30	0	569.7	0.036			+	21620	KPQLALSDQI	10	73	556.8195609468875	1111.6245689605748	2	556.8193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KPQLALSDQI_	REV__ENSG00000144824|ENST00000431670|PHLDB2;REV__nc|ENSG00000144824|Q86SQ0-2|PHLDB2;REV__nc|ENSG00000144824|Q86SQ0-3|PHLDB2;REV__PHLDB2|p.K1064Nfs*28|1|0.29|ENSG00000144824|chr3:111967696-111967696|A/-|frameshift_variant;REV__PHLDB2|p.K665Rfs*6|1|0.22|ENSG00000144824|chr3:111920409-111920409|A/-|frameshift_variant;REV__PHLDB2|p.P552Hfs*18|1|0.06|ENSG00000144824|chr3:111913637-111913638|-/AT|frameshift_variant;REV__PHLDB2|p.S734Ifs*5|1|0.07|ENSG00000144824|chr3:111939544-111939545|-/TAACT|frameshift_variant;REV__PHLDB2|p.V822Lfs*6|1|0.1|ENSG00000144824|chr3:111945316-111945316|G/-|frameshift_variant	47.657333605630114	0.47858658696240314	4				NaN	NaN	0	NaN	6818	3091	9905
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9912	27.377	NaN	3032.9	30	0	314.52	0.14			+	49309	VVQSVGGPSY	10	60	496.75645168886496	991.4983504445299	2	496.75592041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VVQSVGGPSY_	REV__ENSG00000104133|ENST00000261866|SPG11;REV__nc|ENSG00000104133|Q96JI7-2|SPG11;REV__nc|ENSG00000104133|Q96JI7-3|SPG11	42.396135135203025	0.5270658956260207	4				NaN	NaN	0	NaN	6819	3091	9905
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9930	27.415	NaN	12189	30	0	1349.9	0.214	+			12470	GEDKTSAQVSL	11	89	567.7856098848422	1133.5566668364843	2	567.7855834960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEDKTSAQVSL_	ENSG00000110002|ENST00000456829|VWA5A;nc|ENSG00000110002|O00534-2|VWA5A;nc|ENSG00000110002|O00534-3|VWA5A;nc|ENSG00000110002|O00534-4|VWA5A;VWA5A|p.D273Ifs*24|1|0.19|ENSG00000110002|chr11:124123014-124123014|A/-|frameshift_variant;VWA5A|p.D571Mfs*3|1|0.56|ENSG00000110002|chr11:124137094-124137094|A/-|frameshift_variant;VWA5A|p.G366Afs*38|1|0.21|ENSG00000110002|chr11:124123733-124123733|G/-|frameshift_variant	77.28774426308219	0.17498409934748582	4				NaN	NaN	0	NaN	6834	3094	9929
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9931	27.418	NaN	9599.3	30	0	1269.1	0.106	+			36823	SIERYHILQ	9	74	579.8175169278709	1157.6204809225417	2	579.8172607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SIERYHILQ_	ENSG00000104643|ENST00000221086|MTMR9;ENST00000530200.1_1_8:11152806-11180294:+|nuORF;nc|ENSG00000104643|Q96QG7-2|MTMR9	85.16082228582465	0.07850854922700509	4				NaN	NaN	0	NaN	6835	3094	9929
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9932	27.421	NaN	5237	30	0	624.9	0.106	+			2099	ALFQGIAKK	9	69	488.3032547729973	974.5919566127947	2	488.30267333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ALFQGIAKK_	ENSG00000113593|ENST00000261308|PPWD1;ENST00000511334.1_1_5:64872783-64879053:+|nuORF;nc|ENSG00000113593|Q96BP3-2|PPWD1	124.59426212874841	0.018418509520798258	4				NaN	NaN	0	NaN	6836	3094	9929
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9933	27.422	NaN	8230.8	30	0	1714.4	0.106	+			14875	GTLPAKLLK	9	80	470.8133555494215	939.612158165643	2	470.81268310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTLPAKLLK_	ENSG00000180011|ENST00000322342|PTGR3;nc|ENSG00000180011|Q8N4Q0-2|PTGR3	47.657333605630114	0.33044192980041115	4				NaN	NaN	0	NaN	6837	3094	9929
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9934	27.424	NaN	7112.8	30	0	3182.2	0.106			+	34521	RVGNGPLPRQ	10	60	547.3163124402419	1092.6180719472836	2	547.31640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RVGNGPLPRQ_	REV__KMT2B|p.P174Qfs*20|1|0.38|ENSG00000272333|chr19:35719862-35719862|C/-|frameshift_variant	25.125986553469783	0.6746423231557295	4				NaN	NaN	0	NaN	6838	3094	9929
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9935	27.426	NaN	8203.6	30	0	1281.3	0.038			+	29590	PFPDRILMQK	10	72	622.8422064073748	NaN	0	622.8419799804688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PFPDRILMQK_	REV__ENST00000428400.5_1_X:47082893-47085639:+|nuORF	37.50817390946774	0.3770175549877019	4				NaN	NaN	0	NaN	6839	3094	9929
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9936	27.427	NaN	4159	30	0	601.1	0.141	+			16961	HPQAINQQF	9	66	541.7726121042505	1081.5306712753008	2	541.7723999023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HPQAINQQF_	ENSG00000119042|ENST00000417098|SATB2;ENST00000483346.2_1_2:200213306-200233427:-|nuORF;nc|ENSG00000119042|Q9UPW6-2|SATB2	53.351449002276354	0.2690372970092375	4				NaN	NaN	0	NaN	6840	3094	9929
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9954	27.466	NaN	4837.7	30	0	654.32	0.214	+			40689	SVATGLNMMKK	11	75	590.3154665993313	1178.6163802654626	2	590.3158569335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVATGLNMMKK_	BAIAP2L1|p.F462Lfs*34|1|0.21|ENSG00000006453|chr7:98304232-98304232|A/-|frameshift_variant;BAIAP2L1|p.P436Hfs*60|4|0.39|ENSG00000006453|chr7:98304311-98304311|G/-|frameshift_variant;ENSG00000006453|ENST00000005260|BAIAP2L1;LMTK2-BAIAP2L1|1|fusion	76.16968421966216	0.18430501143391895	4				NaN	NaN	0	NaN	6855	3097	9953
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9955	27.469	NaN	4266.7	30	0	307.12	0.106			+	7090	CVRLLQFK	8	83	336.2013529747167	1005.5822295243502	3	336.53460693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_CVRLLQFK_	REV__nc|ENSG00000257127|Q5K131|CLLU1	20.481830146152948	0.8005983782650069	4				NaN	NaN	0	NaN	6856	3097	9953
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9956	27.471	NaN	3531.8	30	0	637.26	0.106	+			39299	STASMGGWTK	10	65	513.2396540329082	1024.4647551326163	2	513.2398071289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STASMGGWTK_	ENSG00000166348|ENST00000687698|USP54;ENST00000498143.5_1_10:75279553-75335416:-|nuORF;nc|ENSG00000166348|Q70EL1-6|USP54;nc|ENSG00000166348|Q70EL1-7|USP54;USP54|p.R831Tfs*6|1|0.07|ENSG00000166348|chr10:73519973-73519983|CAGGGCAAGTC/-|frameshift_variant	65.15724298150197	0.31893571707528906	4				NaN	NaN	0	NaN	6857	3097	9953
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9957	27.473	NaN	1961.5	30	0	393.85	0.106			+	18394	IRLSRDEA	8	59	480.26732311814163	958.5200933030833	2	480.2669677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IRLSRDEA_	REV__ENSG00000137055|ENST00000397292|PLAA	27.882242232435846	0.7440473649773525	4				NaN	NaN	0	NaN	6858	3097	9953
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9958	27.475	NaN	5649.1	30	0	387.54	0.106				-1	RHEQQRRRVQE	11	82	782.4126586914062	NaN	0	782.4126586914062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))RHEQQRRRVQE_	chr1:231528826-231529261|164|10.86|0.0|20.05|+|1|TSNAX-DISC1,None|2	18.262085536374414	0.456735970842152	4				NaN	NaN	0	NaN	6859	3097	9953
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9959	27.477	NaN	5728.6	30	0	900.12	0.039			+	-1	VCWRCKWGGK	10	56	640.3154907226562	NaN	0	640.3154907226562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_VCWRC(Carbamidomethyl (C))KWGGK_	REV__KMT2C|p.K1052R|1|0.1|ENSG00000055609|chr7:152224438-152224438|T/C|missense_variant	27.882242232435846	0.4086243523356342	4				NaN	NaN	0	NaN	6860	3097	9953
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9960	27.478	NaN	4890.3	30	0	1334	0.143			+	19556	KCLEKINEIE	10	64	609.82100481881	1217.62745670442	2	609.8197631835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KCLEKINEIE_	REV__ENSG00000166352|ENST00000334307|IFTAP;REV__nc|ENSG00000166352|Q86VG3-2|IFTAP	42.33807565288922	0.5276008846745733	4				NaN	NaN	0	NaN	6861	3097	9953
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9978	27.517	NaN	163210	30	0	15879	0.168	+			19576	KCYDCGKSFR	10	110	660.7952111358414	1319.5758693384828	2	660.794677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_KC(Carbamidomethyl (C))YDC(Carbamidomethyl (C))GKSFR_	ENSG00000197566|ENST00000311331|ZNF624;ENST00000579528.1_1_17:16525604-16527848:-|nuORF;nc|ENSG00000197566|Q9P2J8-2|ZNF624;ZNF624|p.K666Nfs*130|1|0.46|ENSG00000197566|chr17:16622888-16622888|T/-|frameshift_variant;ZNF624|p.K787Ifs*14|1|0.11|ENSG00000197566|chr17:16622526-16622527|-/ATAAATGTAATGAA|frameshift_variant	75.04331003522576	0.23611669241777622	4				NaN	NaN	0	NaN	6876	3100	9977
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9979	27.52	NaN	77042	30	0	22810	0.106	+			49796	VYSHVIQKL	9	112	362.8815733961644	1085.6228907886932	3	362.8818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYSHVIQKL_	ENSG00000135094|ENST00000257549|SDS;SDS|p.G305Afs*18|1|0.17|ENSG00000135094|chr12:113393014-113393014|C/-|frameshift_variant	74.25504064058377	0.12238981753128622	4				NaN	NaN	0	NaN	6877	3100	9977
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9980	27.522	NaN	4877.9	30	0	1039.7	0.106	+			36545	SFISPHKAK	9	82	338.86238060841845	1013.5653124254554	3	338.862548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SFISPHKAK_	ENST00000507477.1_1_17:47778822-47778927:-|nuORF	37.15910966729921	0.4535818937225704	4				NaN	NaN	0	NaN	6878	3100	9977
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9981	27.523	NaN	7475.9	30	0	856.56	0.106	+			36003	SEICGANHSF	10	74	561.2381571762209	1120.4617614192416	2	561.2383422851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_SEIC(Carbamidomethyl (C))GANHSF_	ENSG00000198712|ENST00000361739|MT-CO2	91.26522074875469	0.12383023862516404	4				NaN	NaN	0	NaN	6879	3100	9977
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9982	27.525	NaN	4456.5	30	0	473.39	0.106				-1	 	0	63	521.9935425500405	3646.903862584083	7	522.2802124023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6880	3100	9977
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9983	27.527	NaN	9071.5	30	0	673.49	0.106	+			49797	VYSHVIQKL	9	76	543.819312400238	1085.624071867276	2	543.8190307617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VYSHVIQKL_	ENSG00000135094|ENST00000257549|SDS;SDS|p.G305Afs*18|1|0.17|ENSG00000135094|chr12:113393014-113393014|C/-|frameshift_variant	131.03138772384656	0.014687601201650916	4				NaN	NaN	0	NaN	6881	3100	9977
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	9984	27.529	NaN	14030	30	0	2607.7	0.035	+			46594	VFQEHQTL	8	68	501.25597391167577	NaN	0	501.25592041015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VFQEHQTL_	ENSG00000085733|ENST00000301843|CTTN;ENST00000415461.2_1_11:70253665-70266006:+|nuORF;nc|ENSG00000085733|Q14247-2|CTTN;nc|ENSG00000085733|Q14247-3|CTTN	104.74654710444128	1.7418937515398478	4				NaN	NaN	0	NaN	6882	3100	9977
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10000	27.562	NaN	5572.4	30	0	1056.1	0.214	+			34570	RVLSTSSTL	9	51	482.27724716121975	962.5399413892395	2	482.27703857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVLSTSSTL_	ENSG00000132470|ENST00000200181|ITGB4;ITGB4|p.T1720Rfs*13|1|0.05|ENSG00000132470|chr17:75757046-75757052|GACCACT/-|frameshift_variant;nc|ENSG00000132470|P16144-2|ITGB4;nc|ENSG00000132470|P16144-3|ITGB4;nc|ENSG00000132470|P16144-4|ITGB4	54.722347961057174	0.257609425301511	4				NaN	NaN	0	NaN	6895	3103	9999
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10001	27.566	NaN	9129.2	30	0	1080.8	0.106	+			27897	MTRPYPPLFP	10	77	609.82100481881	1217.62745670442	2	609.8226318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MTRPYPPLFP_	ENST00000484003.1_1_6:32810760-32812105:-|nuORF	46.45678178249821	0.4896490706773647	4				NaN	NaN	0	NaN	6896	3103	9999
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10002	27.568	NaN	3294.1	30	0	631.63	0.106			+	33971	RSEMRKSN	8	63	512.2521758023629	1022.4897986715258	2	512.2529907226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_RSEM(Oxidation (M))RKSN_	REV__ENSG00000171819|ENST00000376819|ANGPTL7	82.24051045832904	0.30490469762271794	4				NaN	NaN	0	NaN	6897	3103	9999
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10003	27.569	NaN	4988.3	30	0	626.28	0.106	+			51315	YSHVIQKL	8	77	494.28491442442106	986.5552759156421	2	494.2844543457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YSHVIQKL_	ENSG00000135094|ENST00000257549|SDS;SDS|p.G305Afs*18|1|0.17|ENSG00000135094|chr12:113393014-113393014|C/-|frameshift_variant	104.74654710444128	0.24806011021879068	4				NaN	NaN	0	NaN	6898	3103	9999
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10004	27.571	NaN	2997.5	30	0	682.71	0.106	+			19667	KDLYANTV	8	59	462.245800913008	922.477048892816	2	462.2452392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KDLYANTV_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENST00000431536.1_1_1:78239597-78239909:-|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000493945.5_1_7:5567381-5567853:-|nuORF;ENST00000507366.1_1_5:79595499-79595778:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF	40.05817265558897	0.6559515544096944	4				NaN	NaN	0	NaN	6899	3103	9999
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10005	27.573	NaN	6742.1	30	0	1238.8	0.04			+	-1	IDDDGFFDQLC	11	59	672.7755737304688	NaN	0	672.7755737304688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_IDDDGFFDQLC(Carbamidomethyl (C))_	REV__ENSG00000133083|ENST00000360631|DCLK1;REV__nc|ENSG00000133083|O15075-2|DCLK1	29.170058357718403	0.43541742044178583	4				NaN	NaN	0	NaN	6900	3103	9999
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10006	27.574	NaN	5437.5	30	0	840.42	0.144	+			29335	NYSTVPQKQTL	11	73	639.839003633719	1277.663454334238	2	639.8382568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NYSTVPQKQTL_	ENSG00000100722|ENST00000251038|ZC3H14;nc|ENSG00000100722|Q6PJT7-10|ZC3H14;nc|ENSG00000100722|Q6PJT7-11|ZC3H14;nc|ENSG00000100722|Q6PJT7-2|ZC3H14;nc|ENSG00000100722|Q6PJT7-3|ZC3H14;nc|ENSG00000100722|Q6PJT7-4|ZC3H14;nc|ENSG00000100722|Q6PJT7-5|ZC3H14;nc|ENSG00000100722|Q6PJT7-9|ZC3H14	50.79123845855914	0.4102859592092987	4				NaN	NaN	0	NaN	6901	3103	9999
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10023	27.61	NaN	13309	30	0	2000.7	0.214			+	15998	HAPAKTLQY	9	81	514.7801674204945	1027.545781907789	2	514.7800903320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HAPAKTLQY_	REV__ENSG00000142273|ENST00000647358|CBLC;REV__nc|ENSG00000142273|Q9ULV8-2|CBLC	55.50420428727701	0.2510918378945873	4				NaN	NaN	0	NaN	6915	3106	10022
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10024	27.614	NaN	6249.2	30	0	768.15	0.106			+	7220	DAITKAGKEK	10	70	530.803809182178	1059.593065431156	2	530.8037719726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DAITKAGKEK_	REV__tr|U7SLS6|U7SLS6_FUSNUIroncomplexoutermembranerecepterproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02155PE=3SV=1	56.43379154798735	0.3982744522255666	4				NaN	NaN	0	NaN	6916	3106	10022
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10025	27.616	NaN	9849.6	30	0	1205.2	0.106	+			1757	AIALALREK	9	74	492.813955554247	983.613358175294	2	492.8131103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AIALALREK_	ENSG00000039123|ENST00000230640|MTREX	127.46168284122857	0.016682644177004526	4				NaN	NaN	0	NaN	6917	3106	10022
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10026	27.618	NaN	3823.3	30	0	474.33	0.106	+			7766	DPAHGAQGSDV	11	67	527.2345870562949	1052.4546211793897	2	527.2348022460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DPAHGAQGSDV_	nc|ENSG00000130775|Q5TEJ8-6|THEMIS2	49.536043120802724	0.4274608637932522	4				NaN	NaN	0	NaN	6918	3106	10022
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10027	27.62	NaN	5024.2	30	0	804.15	0.106	+			18150	ILNQGLIQELV	11	60	620.3689872388	1238.7234215443998	2	620.3694458007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ILNQGLIQELV_	ENST00000325110.10_1_5:43292976-43293042:-|nuORF	27.64392233501311	0.6998289966465058	4				NaN	NaN	0	NaN	6919	3106	10022
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10028	27.622	NaN	1854.5	30	0	184.27	0.034	+			13749	GQCRGYEI	8	40	463.21352130568795	924.4124896781759	2	463.2131652832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GQCRGYEI_	ENSG00000134253|ENST00000256649|TRIM45;nc|ENSG00000134253|Q9H8W5-2|TRIM45;TRIM45|p.K472Rfs*24|1|0.12|ENSG00000134253|chr1:117115629-117115629|G/-|frameshift_variant	35.61828744233558	0.6843154725607303	4				NaN	NaN	0	NaN	6920	3106	10022
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10029	27.622	NaN	2114.9	30	0	231.05	0.14	+			19951	KEFTPPVQ	8	46	473.2557297931961	944.4969066531922	2	473.2555847167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KEFTPPVQ_	ENSG00000244734|ENST00000335295|HBB	52.936696900407355	0.5717071646657654	4				NaN	NaN	0	NaN	6921	3106	10022
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10046	27.658	NaN	15412	30	0	3873.6	0.214				-1	VMIVMVPSL	9	113	335.52219180410043	1003.5447460125013	3	335.5223388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_VMIVM(Oxidation (M))VPSL_	ENSG00000073060|ENST00000261693|SCARB1;ENST00000539320.2_1_12:125347034-125348347:-|nuORF;nc|ENSG00000073060|Q8WTV0-3|SCARB1;nc|ENSG00000073060|Q8WTV0-5|SCARB1;nc|ENSG00000073060|Q8WTV0|SCARB1	49.44154591367651	0.3095138337212152	4				NaN	NaN	0	NaN	6935	3109	10045
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10047	27.662	NaN	9344.9	30	0	1334.8	0.106	+			6632	AYSVEHNQL	9	73	530.7567542752432	NaN	0	530.7568359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AYSVEHNQL_	ENSG00000117523|ENST00000647382|PRRC2C;nc|ENSG00000117523|Q9Y520-2|PRRC2C;nc|ENSG00000117523|Q9Y520-3|PRRC2C;nc|ENSG00000117523|Q9Y520-4|PRRC2C;nc|ENSG00000117523|Q9Y520-5|PRRC2C;nc|ENSG00000117523|Q9Y520-6|PRRC2C;nc|ENSG00000117523|Q9Y520|PRRC2C;PRRC2C|p.K1018Nfs*7|1|0.21|ENSG00000117523|chr1:171540521-171540521|A/-|frameshift_variant;PRRC2C|p.P2791Lfs*5|1|0.1|ENSG00000117523|chr1:171591761-171591761|C/-|frameshift_variant	71.87747018426188	0.0992163553043454	4				NaN	NaN	0	NaN	6936	3109	10045
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10048	27.664	NaN	3043.3	30	0	343.32	0.106			+	49503	VWAGRVPM	8	65	458.2479553222656	NaN	0	458.2479553222656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VWAGRVPM_	REV__ENST00000519604.5_1_20:61919974-61920067:+|nuORF	60.29395666154354	1.7418937515398478	4				NaN	NaN	0	NaN	6937	3109	10045
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10049	27.666	NaN	5878.9	30	0	1080.7	0.106				-1	MADSMFVIPAL	11	51	613.7921752929688	NaN	0	613.7921752929688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Oxidation (M)	_M(Oxidation (M))ADSM(Oxidation (M))FVIPAL_	CES2|p.Q491Sfs*27|1|0.27|ENSG00000172831|chr16:66942242-66942242|T/-|frameshift_variant;ENSG00000172831|ENST00000317091|CES2;ENST00000568347.1_1_16:66976007-66976268:+|nuORF;ENST00000568470.5_1_16:66969809-66977925:+|nuORF;nc|ENSG00000172831|O00748-2|CES2;nc|ENSG00000172831|O00748-4|CES2;nc|ENSG00000172831|O00748-5|CES2	32.81241826257853	0.4191849651971536	4				NaN	NaN	0	NaN	6938	3109	10045
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10050	27.668	NaN	3948.2	30	0	469.62	0.106				-1	EQNCMESSM	9	66	537.6806031183024	1073.3466533034048	2	537.6820068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_EQNCMESSM(Oxidation (M))_	ENSG00000171385|ENST00000302127|KCND3;KCND3|p.P633Lfs*13|1|0.18|ENSG00000171385|chr1:111776147-111776147|G/-|frameshift_variant;nc|ENSG00000171385|Q9UK17-2|KCND3	21.9598887501803	0.5980208138527809	4				NaN	NaN	0	NaN	6939	3109	10045
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10051	27.669	NaN	5287.7	30	0	974.62	0.038	+			33766	RPTSLAWEVK	10	65	593.8331298828125	NaN	0	593.8331298828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RPTSLAWEVK_	ENSG00000140386|ENST00000563290|SCAPER;ENST00000303521.10_1_15:76673691-77134263:-|nuORF;ENST00000538941.6_1_15:77085706-77134263:-|nuORF;SCAPER|p.E946Rfs*19|1|0.15|ENSG00000140386|chr15:76574160-76574161|-/T|frameshift_variant;SCAPER|p.K784Nfs*2|1|0.32|ENSG00000140386|chr15:76702901-76702901|G/-|frameshift_variant	20.83715455343099	0.4201028297492154	4				NaN	NaN	0	NaN	6940	3109	10045
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10052	27.67	NaN	3529.9	30	0	497.63	0.14				-1	 	0	69	384.77192393383325	767.5292949344665	2	384.7716064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	6941	3109	10045
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10069	27.706	NaN	51708	30	0	14850	0.214	+			37965	SPHGGALVM	9	79	434.72035099331515	867.4261490534303	2	434.7207946777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SPHGGALVM_	ENSG00000164880|ENST00000404767|INTS1	79.9392285194092	0.09781135437301468	4				NaN	NaN	0	NaN	6955	3112	10068
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10070	27.71	NaN	38188	30	0	7426.9	0.106	+			43054	TELIQKAKL	9	124	348.5533028116006	1042.6380790350017	3	348.5534973144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TELIQKAKL_	ENSG00000134308|ENST00000238081|YWHAQ	93.1432384553994	0.056003526918089595	4				NaN	NaN	0	NaN	6956	3112	10068
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10071	27.712	NaN	15952	30	0	3549.8	0.106	+			19853	KEEIIKTL	8	79	487.3002176851559	972.5858824371119	2	487.2999572753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEEIIKTL_	ENSG00000108298|ENST00000225430|RPL19;ENST00000423330.1_1_9:133527641-133527767:+|nuORF;ENST00000424919.1_1_X:150162237-150162561:+|nuORF;ENST00000432746.1_1_7:102781798-102782185:-|nuORF;ENST00000433839.1_1_10:122892628-122892781:-|nuORF;ENST00000498753.1_1_3:141762467-141763034:-|nuORF;ENST00000577759.1_1_17:37360679-37360898:+|nuORF	143.8867514904718	0.2724165679903577	4				NaN	NaN	0	NaN	6957	3112	10068
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10072	27.714	NaN	5235.9	30	0	380.46	0.106	+			3561	ASTLVILRK	9	64	500.82956552852545	999.6445781238509	2	500.82940673828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASTLVILRK_	ENSG00000176273|ENST00000427197|SLC35G1;nc|ENSG00000176273|Q2M3R5-2|SLC35G1	45.02220120713402	0.3613509778819777	4				NaN	NaN	0	NaN	6958	3112	10068
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10073	27.716	NaN	18022	30	0	2574.6	0.106	+			43864	TMDKSELVQK	10	90	610.8129204674487	1219.6112880016974	2	610.8139038085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))TMDKSELVQK_	ENSG00000166913|ENST00000353703|YWHAB	117.5257442709337	0.03082425562130952	4				NaN	NaN	0	NaN	6959	3112	10068
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10074	27.717	NaN	6644	30	0	1316	0.037	+			14861	GTLMWHQMK	9	67	574.2731908927282	1146.5318288522562	2	574.2735595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_GTLM(Oxidation (M))WHQMK_	ENST00000346169.6_1_3:184032401-184033585:+|nuORF;ENST00000352767.7_2_3:184032446-184033585:+|nuORF	96.19043198914106	0.047412499214244314	4				NaN	NaN	0	NaN	6960	3112	10068
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10075	27.718	NaN	4755.1	30	0	738.81	0.141			+	20025	KEISSITVGAA	11	65	538.3034797489811	1074.592406564762	2	538.3037719726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KEISSITVGAA_	REV__chr17:81933376-81934926|451|10.96|0.66|4.06|-|ENST00000584848|PYCR1,PYCR1;REV__ENSG00000183010|ENST00000329875|PYCR1;REV__nc|ENSG00000183010|P32322-2|PYCR1;REV__nc|ENSG00000183010|P32322-3|PYCR1	30.139142570347243	0.6736561713168612	4				NaN	NaN	0	NaN	6961	3112	10068
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10093	27.757	NaN	5093.7	30	0	1315.5	0.214			+	32032	QRPVRVKH	8	58	340.5462697622727	1018.616979887018	3	340.54638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QRPVRVKH_	REV__ENSG00000087008|ENST00000356406|ACOX3;REV__ENST00000510365.5_1_4:8376552-8417570:-|nuORF;REV__nc|ENSG00000087008|O15254-2|ACOX3	19.359975847455235	0.7988239741663654	4				NaN	NaN	0	NaN	6976	3115	10092
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10094	27.761	NaN	3241.6	30	0	258.84	0.106	+			1796	AIFKPVMSK	9	67	510.7994473422114	1019.5843417512228	2	510.79913330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AIFKPVMSK_	ENSG00000116478|ENST00000373548|HDAC1	43.650786325866115	0.37743712540499297	4				NaN	NaN	0	NaN	6977	3115	10092
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10095	27.763	NaN	8516.1	30	0	904.44	0.106			+	25373	LPGTQELGALT	11	71	550.3035222396774	1098.5924915461546	2	550.3038940429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LPGTQELGALT_	REV__ENSG00000100106|ENST00000644935|TRIOBP;REV__nc|ENSG00000100106|Q9H2D6-2|TRIOBP;REV__nc|ENSG00000100106|Q9H2D6-3|TRIOBP;REV__TRIOBP|p.L1770Qfs*47|1|0.09|ENSG00000100106|chr22:37741018-37741019|-/AGTGT|frameshift_variant	90.60085204095205	0.09631492835457038	4				NaN	NaN	0	NaN	6978	3115	10092
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10096	27.765	NaN	2599.7	30	0	295.82	0.106			+	37710	SLSSLPAAAL	10	52	465.2693901836018	928.5242274340036	2	465.2691650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLSSLPAAAL_	REV__ENST00000345990.8_2_5:122847977-122881201:+|nuORF	37.15910966729921	0.575322462179216	4				NaN	NaN	0	NaN	6979	3115	10092
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10097	27.767	NaN	10161	30	0	1274.2	0.106			+	34020	RSKVEAIL	8	70	458.28476908565943	914.5549852381189	2	458.284423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RSKVEAIL_	REV__ENSG00000088280|ENST00000336689|ASAP3;REV__nc|ENSG00000088280|Q8TDY4-3|ASAP3	65.80317337860623	0.44433089765398776	4				NaN	NaN	0	NaN	6980	3115	10092
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10098	27.768	NaN	2109.4	30	0	196.32	0.034			+	47212	VMAQVYAR	8	50	469.2498277122868	936.4851024913736	2	469.2493896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VMAQVYAR_	REV__ADGRL3|p.H1275Lfs*11|1|0.08|ENSG00000150471|chr4:62070322-62070322|A/-|frameshift_variant;REV__ADGRL3|p.S1005Nfs*24|1|0.05|ENSG00000150471|chr4:61983584-61983585|-/ACATCCAG|frameshift_variant;REV__ADGRL3|p.W832Lfs*13|1|0.39|ENSG00000150471|chr4:61948167-61948168|-/T|frameshift_variant;REV__ADGRL3|p.Y966Lfs*9|1|0.19|ENSG00000150471|chr4:61983464-61983465|-/T|frameshift_variant;REV__ENSG00000150471|ENST00000683033|ADGRL3;REV__nc|ENSG00000150471|Q9HAR2-2|ADGRL3;REV__nc|ENSG00000150471|Q9HAR2-4|ADGRL3	37.028477286268924	0.6747514403204248	4				NaN	NaN	0	NaN	6981	3115	10092
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10099	27.769	NaN	7260.6	30	0	1013.7	0.145			+	-1	RRWTLVFPCAT	11	80	703.8745524852822	1405.7345520373642	2	703.87255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_RRWTLVFPC(Carbamidomethyl (C))AT_	REV__ENST00000448516.6_1_16:31142309-31142426:+|nuORF	33.921630207806714	0.6339809607503234	4				NaN	NaN	0	NaN	6982	3115	10092
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10117	27.808	NaN	19419	30	0	3956.4	0.214	+			3638	ASWGGTIEK	9	72	474.7429954472823	947.4714379613646	2	474.74261474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASWGGTIEK_	ENSG00000144426|ENST00000683969|NBEAL1;NBEAL1|p.A1274Qfs*17|1|0.1|ENSG00000144426|chr2:203135766-203135766|A/-|frameshift_variant;NBEAL1|p.F1670Lfs*25|1|0.21|ENSG00000144426|chr2:203144843-203144843|T/-|frameshift_variant;NBEAL1|p.F2315Lfs*2|1|0.17|ENSG00000144426|chr2:203193900-203193900|T/-|frameshift_variant;NBEAL1|p.K2562Rfs*15|1|0.41|ENSG00000144426|chr2:203209306-203209306|A/-|frameshift_variant;NBEAL1|p.N2072Kfs*10|1|0.35|ENSG00000144426|chr2:203172825-203172826|-/A|frameshift_variant;NBEAL1|p.T1311Nfs*3|1|0.08|ENSG00000144426|chr2:203135875-203135876|-/A|frameshift_variant;nc|ENSG00000144426|Q6ZS30-1|NBEAL1;nc|ENSG00000144426|Q6ZS30|NBEAL1	134.7655990226056	0.012935733000282069	4				NaN	NaN	0	NaN	6997	3118	10116
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10118	27.811	NaN	8196.3	30	0	2342	0.106	+			49873	VYTDCSNKL	9	71	521.7475167535943	1041.4804805739884	2	521.7473754882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYTDCSNKL_	ENSG00000183530|ENST00000327423|PRR14L;nc|ENSG00000183530|Q5THK1-2|PRR14L;nc|ENSG00000183530|Q5THK1-3|PRR14L;nc|ENSG00000183530|Q5THK1-4|PRR14L;PRR14L|p.L1550*|1|0.31|ENSG00000183530|chr22:31713190-31713190|A/-|frameshift_variant	58.22992032128504	0.22837015374068087	4				NaN	NaN	0	NaN	6998	3118	10116
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10119	27.813	NaN	10336	30	0	4051.1	0.106			+	-1	EEALDCACL	9	59	540.7195983824042	1079.4246438316084	2	540.7201538085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_EEALDC(Carbamidomethyl (C))AC(Carbamidomethyl (C))L_	REV__ARHGEF18-MAPKAP1|1|fusion;REV__ARHGEF18-MAPKAP1|2|fusion;REV__ENSG00000119487|ENST00000265960|MAPKAP1;REV__nc|ENSG00000119487|Q9BPZ7-2|MAPKAP1;REV__nc|ENSG00000119487|Q9BPZ7-3|MAPKAP1;REV__nc|ENSG00000119487|Q9BPZ7-4|MAPKAP1	24.20275056022122	0.577060078256802	4				NaN	NaN	0	NaN	6999	3118	10116
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10120	27.815	NaN	6531.6	30	0	1835.3	0.106	+			41520	SVPSSETVICR	11	70	617.8081627735826	1233.601772613965	2	617.80810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_SVPSSETVIC(Carbamidomethyl (C))R_	ENSG00000155090|ENST00000285407|KLF10;nc|ENSG00000155090|Q13118-2|KLF10	54.722347961057174	0.3705654281804646	4				NaN	NaN	0	NaN	7000	3118	10116
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10121	27.817	NaN	7170	30	0	1366.2	0.106	+			14731	GTISSMYQTK	10	68	558.2739087180739	1114.5332645029478	2	558.2741088867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTISSMYQTK_	ENSG00000135926|ENST00000258412|TMBIM1	122.93914200107957	0.02317863035582428	4				NaN	NaN	0	NaN	7001	3118	10116
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10122	27.819	NaN	9332.3	30	0	1063.4	0.035	+			14051	GSIDIQHLK	9	76	505.7851251451705	1009.5556973571411	2	505.7859191894531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GSIDIQHLK_	ENSG00000126870|ENST00000407559|DYNC2I1	124.08010499294276	0.018729767491916592	4				NaN	NaN	0	NaN	7002	3118	10116
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10123	27.819	NaN	2876.7	30	0	548.2	0.139	+			8668	EDTFRQSP	8	64	490.22774970141325	NaN	0	490.2262878417969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EDTFRQSP_	ENSG00000151612|ENST00000508784|ZNF827;nc|ENSG00000151612|Q17R98-2|ZNF827;nc|ENSG00000151612|Q17R98-3|ZNF827	25.450171626174864	1.7418937515398478	4				NaN	NaN	0	NaN	7003	3118	10116
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10140	27.856	NaN	110120	30	0	14759	0.214	+			23316	KYQEVTNNL	9	89	554.7853900360783	1107.5562271389565	2	554.7855224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KYQEVTNNL_	ENSG00000135387|ENST00000341394|CAPRIN1;nc|ENSG00000135387|Q14444-2|CAPRIN1	176.44474024533739	0.0016668318535579616	4				NaN	NaN	0	NaN	7017	3121	10139
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10141	27.86	NaN	10815	30	0	1165.2	0.106			+	37005	SIQAQIQSL	9	73	494.27751597933417	986.5404790254684	2	494.2770080566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SIQAQIQSL_	REV__CON__P13645;REV__ENSG00000186395|ENST00000269576|KRT10	83.6470233535746	0.08277643980271215	4				NaN	NaN	0	NaN	7018	3121	10139
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10142	27.862	NaN	4382.1	30	0	478.14	0.106	+			23593	LANEHNVAL	9	63	490.761919025925	979.50928511865	2	490.7614440917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LANEHNVAL_	ENSG00000065150|ENST00000651721|IPO5;nc|ENSG00000065150|O00410-2|IPO5;nc|ENSG00000065150|O00410-3|IPO5	58.78195531508484	0.22376836668196862	4				NaN	NaN	0	NaN	7019	3121	10139
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10143	27.864	NaN	4711.3	30	0	626.85	0.106	+			8737	EEFGRFASF	9	71	545.255723053093	1088.496893172986	2	545.255615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EEFGRFASF_	ENSG00000204287|ENST00000395388|HLA-DRA;HLA-DRA|p.R69W|1|0.14|ENSG00000204287|chr6:32442570-32442570|C/T|missense_variant	56.72105179125745	0.24094814563026265	4				NaN	NaN	0	NaN	7020	3121	10139
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10144	27.866	NaN	4085	30	0	1105.9	0.106	+			22865	KVKTLLLNAA	10	63	535.849775789899	1069.684998646598	2	535.849853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KVKTLLLNAA_	ENSG00000077150|ENST00000661543|NFKB2;nc|ENSG00000077150|Q00653-4|NFKB2	34.08650109265054	0.601467140718965	4				NaN	NaN	0	NaN	7021	3121	10139
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10145	27.868	NaN	8677.8	30	0	1763	0.037			+	31880	QPYWAAGPGW	10	64	566.7644672373382	1131.5143815414763	2	567.2659912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QPYWAAGPGW_	REV__ENSG00000122376|ENST00000298786|SHLD2;REV__ENST00000497389.6_1_10:46918355-46938364:+|nuORF;REV__nc|ENSG00000122376|Q86V20|SHLD2	24.20275056022122	0.6821818413321409	4				NaN	NaN	0	NaN	7022	3121	10139
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10146	27.868	NaN	3195.1	30	0	1192.2	0.14	+			50923	YGPSSAGNG	9	53	405.17322292560095	NaN	0	405.1733703613281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YGPSSAGNG_	ENSG00000130402|ENST00000252699|ACTN4;ENST00000588618.5_1_19:39138385-39212431:+|nuORF;nc|ENSG00000130402|O43707-2|ACTN4;nc|ENSG00000130402|O43707-3|ACTN4	23.04248740728303	0.3589936788096251	4				NaN	NaN	0	NaN	7023	3121	10139
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10164	27.907	NaN	9680.2	30	0	1411.1	0.214	+			47095	VLKVLSSLK	9	79	493.83430395855044	985.6540549839009	2	493.833740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VLKVLSSLK_	DIDO1|p.G1745Afs*119|1|0.26|ENSG00000101191|chr20:62880722-62880722|C/-|frameshift_variant;DIDO1|p.P1738Hfs*126|1|0.39|ENSG00000101191|chr20:62880743-62880743|G/-|frameshift_variant;DIDO1|p.S1285Afs*76|1|0.39|ENSG00000101191|chr20:62882104-62882104|G/-|frameshift_variant;ENSG00000101191|ENST00000395343|DIDO1	49.536043120802724	0.308405419312776	4				NaN	NaN	0	NaN	7038	3124	10163
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10165	27.911	NaN	14684	30	0	2140.8	0.106	+			43580	TIFGKIIRK	9	82	538.3531865072774	1074.6918200813548	2	538.3533935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TIFGKIIRK_	ENSG00000169567|ENST00000304043|HINT1	112.10723106719422	0.02684780151337622	4				NaN	NaN	0	NaN	7039	3124	10163
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10166	27.913	NaN	8963.3	30	0	2814.6	0.106	+			15244	GTTAVFINK	9	73	475.7688501997433	949.5231474662867	2	475.7685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTTAVFINK_	ASH1L|p.H1793Ifs*7|1|0.13|ENSG00000116539|chr1:155438778-155438778|G/-|frameshift_variant;ASH1L|p.I970Lfs*9|1|0.2|ENSG00000116539|chr1:155479962-155479962|T/-|frameshift_variant;ASH1L|p.K1222Rfs*11|4|0.27|ENSG00000116539|chr1:155479205-155479205|T/-|frameshift_variant;ASH1L|p.K1533Sfs*17|1|0.25|ENSG00000116539|chr1:155478272-155478272|T/-|frameshift_variant;ASH1L|p.K2377Nfs*5|1|0.28|ENSG00000116539|chr1:155354570-155354570|T/-|frameshift_variant;ASH1L|p.N1822Tfs*2|1|0.33|ENSG00000116539|chr1:155438690-155438690|T/-|frameshift_variant;ASH1L|p.R712Efs*23|3|0.35|ENSG00000116539|chr1:155480736-155480736|T/-|frameshift_variant;ASH1L|p.S2309Ifs*11|1|0.64|ENSG00000116539|chr1:155357635-155357636|-/T|frameshift_variant;ENSG00000116539|ENST00000392403|ASH1L;nc|ENSG00000116539|Q9NR48|ASH1L	63.53385203322761	0.18415635464017938	4				NaN	NaN	0	NaN	7040	3124	10163
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10167	27.915	NaN	3859.7	30	0	435.77	0.106			+	43477	TGPALHTIVV	10	73	336.5342216840962	NaN	0	336.5343017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TGPALHTIVV_	REV__ENSG00000153048|ENST00000311052|CARHSP1	23.04248740728303	0.42010282974921537	4				NaN	NaN	0	NaN	7041	3124	10163
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10168	27.917	NaN	22569	30	0	2346.4	0.106	+			48201	VTAKELSLVNK	11	85	601.3612466718026	1200.7079404104052	2	601.3609008789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTAKELSLVNK_	ENSG00000050405|ENST00000341247|LIMA1;LIMA1|p.T536Lfs*38|2|0.4|ENSG00000050405|chr12:50177739-50177739|G/-|frameshift_variant;nc|ENSG00000050405|Q9UHB6-4|LIMA1	152.95810377516358	6.558635273153051E-05	4				NaN	NaN	0	NaN	7042	3124	10163
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10169	27.919	NaN	4248.1	30	0	858	0.037				-1	KCMKMQGEEG	10	56	586.7431030273438	NaN	0	586.7431030273438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Oxidation (M)	_KCM(Oxidation (M))KM(Oxidation (M))QGEEG_	ENST00000413305.5_1_3:8675424-8686428:-|nuORF;ENST00000495366.5_1_3:8675888-8681636:-|nuORF	27.882242232435846	0.4086243523356342	4				NaN	NaN	0	NaN	7043	3124	10163
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10170	27.919	NaN	4482.5	30	0	535.33	0.141				-1	NGMSFVCIGAI	11	65	564.2659196162999	1126.5172862993998	2	564.264892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_NGM(Oxidation (M))SFVCIGAI_	ENSG00000059804|ENST00000075120|SLC2A3;ENSG00000173262|ENST00000431042|SLC2A14;ENST00000469295.1_1_12:8074011-8075632:-|nuORF;nc|ENSG00000173262|Q8TDB8-3|SLC2A14;nc|ENSG00000173262|Q8TDB8-4|SLC2A14;nc|ENSG00000173262|Q8TDB8-5|SLC2A14;nc|ENSG00000173262|Q8TDB8|SLC2A14	40.77816245573522	0.5472954108598816	4				NaN	NaN	0	NaN	7044	3124	10163
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10188	27.957	NaN	9200.4	30	0	1433.8	0.214	+			12825	GENDRGVSF	9	67	490.72556238844754	979.4365718436951	2	490.7252197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GENDRGVSF_	ENSG00000172531|ENST00000376745|PPP1CA;ENSG00000186298|ENST00000335007|PPP1CC;ENSG00000213639|ENST00000395366|PPP1CB;ENST00000462832.5_1_2:29006774-29038903:+|nuORF;ENST00000526510.5_1_11:67166008-67168740:-|nuORF;ENST00000532279.1_1_11:67166350-67167062:-|nuORF;ENST00000532446.5_1_11:67166008-67168991:-|nuORF;nc|ENSG00000172531|P62136-2|PPP1CA;nc|ENSG00000172531|P62136-3|PPP1CA;nc|ENSG00000186298|P36873-2|PPP1CC	85.86182877749512	0.07653218437724067	4				NaN	NaN	0	NaN	7059	3127	10187
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10189	27.96	NaN	6482.6	30	0	2234.4	0.106			+	9726	EMVHEQVDK	9	64	557.7644498043165	1113.514346675433	2	557.7640380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EMVHEQVDK_	REV__ENSG00000166398|ENST00000299505|GARRE1	56.43379154798735	0.2433427591689151	4				NaN	NaN	0	NaN	7060	3127	10187
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10190	27.963	NaN	6109.6	30	0	696.37	0.106	+			11419	FLSAREVAR	9	71	524.7988674073345	1047.5831818814688	2	524.7989501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FLSAREVAR_	ENSG00000103657|ENST00000443617|HERC1;HERC1|p.C2300Hfs*14|1|0.44|ENSG00000103657|chr15:63678017-63678018|AA/-|frameshift_variant;HERC1|p.L3887Pfs*44|1|0.06|ENSG00000103657|chr15:63640394-63640395|-/ATGAATGG|frameshift_variant;HERC1|p.M2237*|1|0.39|ENSG00000103657|chr15:63678206-63678206|T/-|frameshift_variant;HERC1|p.V1879Lfs*26|1|0.37|ENSG00000103657|chr15:63694004-63694004|T/-|frameshift_variant	41.42661286455405	0.403525789677298	4				NaN	NaN	0	NaN	7061	3127	10187
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10191	27.964	NaN	4698.3	30	0	1438	0.106	+			44170	TQSFKRKPG	9	74	350.20133397008277	1047.5821725104483	3	350.2016296386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TQSFKRKPG_	ENSG00000112159|ENST00000369393|MDN1;MDN1|p.L5278Ffs*6|1|0.18|ENSG00000112159|chr6:89652273-89652274|-/A|frameshift_variant	25.57405402267927	0.5642445186134241	4				NaN	NaN	0	NaN	7062	3127	10187
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10192	27.966	NaN	2370.8	30	0	612.23	0.106			+	33272	RGHGCEDM	8	50	452.67498779296875	NaN	0	452.67498779296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RGHGCEDM_	REV__ENSG00000185518|ENST00000394232|SV2B;REV__SV2B|p.G586Wfs*4|2|0.27|ENSG00000185518|chr15:91289561-91289562|-/T|frameshift_variant	19.359975847455235	1.7418937515398478	4				NaN	NaN	0	NaN	7063	3127	10187
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10193	27.968	NaN	5858.7	30	0	685.4	0.039				-1	HPFKCNECGKT	11	66	660.7952111358414	1319.5758693384828	2	660.7946166992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_HPFKCNEC(Carbamidomethyl (C))GKT_	ENSG00000142528|ENST00000270617|ZNF473;ZNF473|p.D680Efs*13|1|0.22|ENSG00000142528|chr19:50046482-50046483|AC/-|frameshift_variant	22.579656572578934	0.7529490144093228	4				NaN	NaN	0	NaN	7064	3127	10187
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10194	27.969	NaN	4557.6	30	0	735.71	0.142	+			10202	ETEQQQKEE	9	70	574.7560265127483	1147.4975000922966	2	574.7554931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ETEQQQKEE_	DENND4A|p.S1755Vfs*10|1|0.47|ENSG00000174485|chr15:65664687-65664687|T/-|frameshift_variant;ENSG00000174485|ENST00000443035|DENND4A;nc|ENSG00000174485|Q7Z401-2|DENND4A;nc|ENSG00000174485|Q7Z401|DENND4A	37.81151784470057	0.4459294069877048	4				NaN	NaN	0	NaN	7065	3127	10187
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10212	28.006	NaN	57482	30	0	20620	0.214				-1	 	0	89	343.19883023843255	684.3831075436651	2	343.1989440917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7080	3130	10211
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10213	28.009	NaN	18674	30	0	8471.8	0.106	+			35252	SALHIAIEK	9	108	327.86228837554677	980.5650357268403	3	327.86248779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SALHIAIEK_	ENSG00000187688|ENST00000338560|TRPV2;TRPV2|p.I444Sfs*23|3|0.39|ENSG00000187688|chr17:16427521-16427521|G/-|frameshift_variant	51.19269402634007	0.2889735674168909	4				NaN	NaN	0	NaN	7081	3130	10211
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10214	28.012	NaN	6598.5	30	0	917.71	0.106	+			51596	YYQDTPKQI	9	67	578.2882812520327	1154.5620095708653	2	578.288330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YYQDTPKQI_	ENSG00000048162|ENST00000614830|NOP16	117.81106730687013	0.02252488733980868	4				NaN	NaN	0	NaN	7082	3130	10211
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10215	28.013	NaN	3705.8	30	0	449.38	0.106	+			17201	HVASQPVM	8	69	434.72035099331515	867.4261490534303	2	434.72064208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HVASQPVM_	ENSG00000214013|ENST00000318010|GANC	35.200714571348534	0.6875396545722289	4				NaN	NaN	0	NaN	7083	3130	10211
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10216	28.015	NaN	1747.9	30	0	107	0.106	+			24685	LHALLTGV	8	60	412.25552592884446	NaN	0	412.255615234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LHALLTGV_	tr|U7T8A7|U7T8A7_FUSNUPTSsystem,N-acetylglucosamine-specificIIBCcomponentOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00177PE=4SV=1	20.481830146152948	1.741893751539848	4				NaN	NaN	0	NaN	7084	3130	10211
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10217	28.017	NaN	3363.2	30	0	1484.5	0.106				-1	 	0	69	333.17380417762485	664.3330554220497	2	333.17413330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7085	3130	10211
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10218	28.019	NaN	2865.7	30	0	238.76	0.033				-1	 	0	57	441.7878365978988	881.5611202625976	2	441.78778076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7086	3130	10211
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10232	28.048	NaN	6063.3	30	0	1406.9	0.214			+	11927	FVFERLRQ	8	67	547.8092081821493	1093.6038634310985	2	547.809326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FVFERLRQ_	REV__sp|F5HC14|UL119_HCMVMViralFc-gammareceptor-likeproteinUL119OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL119/UL118PE=3SV=1;REV__sp|P16739|UL119_HCMVAViralFc-gammareceptor-likeproteinUL119OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL119/UL118PE=2SV=2	38.80614096846853	0.6637206697844082	4				NaN	NaN	0	NaN	7097	3133	10231
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10233	28.052	NaN	5156.8	30	0	575.53	0.106	+			1885	AILTTVTQK	9	68	487.7979093082298	973.5812656832596	2	487.7976989746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AILTTVTQK_	ENSG00000198677|ENST00000358746|SKIC3;ENST00000513232.1_1_5:94857997-94861145:-|nuORF	82.7504851949679	0.08565546331141553	4				NaN	NaN	0	NaN	7098	3133	10231
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10234	28.054	NaN	4875.5	30	0	518.49	0.106	+			36201	SELLLHQKV	9	67	533.816849257136	1065.619145581072	2	533.8170776367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SELLLHQKV_	ENSG00000102870|ENST00000262525|ZNF629	95.81516180277367	0.04847050768394289	4				NaN	NaN	0	NaN	7099	3133	10231
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10235	28.056	NaN	3305.5	30	0	304.75	0.106	+			46333	VEKKPLVAL	9	62	498.8265314736958	995.6385100141916	2	498.82586669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VEKKPLVAL_	ENSG00000196116|ENST00000355295|TDRD7;nc|ENSG00000196116|Q8NHU6-2|TDRD7;nc|ENSG00000196116|Q8NHU6-3|TDRD7	45.97224482568171	0.3502073465782774	4				NaN	NaN	0	NaN	7100	3133	10231
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10236	28.058	NaN	3824.9	30	0	493.42	0.106	+			29312	NYNNQSSNF	9	69	544.2254272258648	1086.4363015185295	2	544.225830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NYNNQSSNF_	chr12:54282662-54282800|482|460.96|0.0|25.46|+|ENST00000677249|HNRNPA1,HNRNPA1;ENSG00000135486|ENST00000340913|HNRNPA1;ENSG00000139675|ENST00000357495|HNRNPA1L2;ENSG00000224578|ENST00000565308|HNRNPA1L3;ENST00000411857.2_1_1:179425361-179425934:-|nuORF;ENST00000432375.1_1_6:32293532-32293889:+|nuORF;ENST00000444886.1_1_9:128358610-128358904:+|nuORF;nc|ENSG00000135486|P09651-2|HNRNPA1;nc|ENSG00000135486|P09651-3|HNRNPA1	49.536043120802724	0.308405419312776	4				NaN	NaN	0	NaN	7101	3133	10231
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10237	28.059	NaN	3653.5	30	0	393.75	0.036	+			23636	LAQMVPNDTI	10	47	551.2842701023935	1100.553987271587	2	551.2840576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LAQMVPNDTI_	tr|U7T6W5|U7T6W5_FUSNUCarboxyltransferasedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00031PE=4SV=1	36.527901853580055	0.5811387260217952	4				NaN	NaN	0	NaN	7102	3133	10231
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10238	28.06	NaN	3665	30	0	701.57	0.14	+			45525	TYHPPGQTF	9	71	524.2483670144582	1046.4821810957162	2	524.2486572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TYHPPGQTF_	FCGBP-ACSS2|1|fusion;nc|ENSG00000275395|Q9Y6R7|FCGBP	64.20726635412375	0.17854274437659667	4				NaN	NaN	0	NaN	7103	3133	10231
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10252	28.09	NaN	98606	30	0	10973	0.202	+			4445	ATILAGDVKVK	11	108	557.8455422106407	1113.6765314880813	2	557.8455200195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATILAGDVKVK_	ENSG00000119669|ENST00000238647|IRF2BPL;ENSG00000168264|ENST00000366609|IRF2BP2;nc|ENSG00000168264|Q7Z5L9-2|IRF2BP2;nc|ENSG00000168264|Q7Z5L9-3|IRF2BP2	209.795921921709	3.554444218717377E-12	4				NaN	NaN	0	NaN	7114	3136	10251
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10253	28.093	NaN	63157	30	0	4197.9	0.106	+			9945	ERAIPTESIT	10	98	558.7987904176268	1115.5830279020536	2	558.7987060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ERAIPTESIT_	ENSG00000170265|ENST00000610704|ZNF282;nc|ENSG00000170265|Q9UDV7-2|ZNF282	104.0567914643314	0.06564926686336217	4				NaN	NaN	0	NaN	7115	3136	10251
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10254	28.096	NaN	2120.6	30	0	270.21	0.106			+	-1	PRCLKATEGI	10	53	382.2081204795493	NaN	0	382.2090759277344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_PRC(Carbamidomethyl (C))LKATEGI_	REV__ENSG00000188659|ENST00000682753|SAXO2;REV__nc|ENSG00000188659|Q658L1-2|SAXO2;REV__nc|ENSG00000188659|Q658L1|SAXO2;REV__SAXO2|p.R273Efs*13|1|0.27|ENSG00000188659|chr15:82282677-82282677|A/-|frameshift_variant	23.52269567125451	0.42010282974921537	4				NaN	NaN	0	NaN	7116	3136	10251
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10255	28.097	NaN	2853.3	30	0	475.89	0.106	+			47425	VPRVTLGT	8	72	421.7583304191601	NaN	0	421.7582092285156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VPRVTLGT_	ENSG00000175164|ENST00000538324|ABO;nc|ENSG00000175164|P16442|ABO	31.954861631926434	1.7418937515398478	4				NaN	NaN	0	NaN	7117	3136	10251
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10256	28.099	NaN	3995.7	30	0	504.15	0.106	+			36656	SGLTVPTSPK	10	61	493.779834614782	985.545116296364	2	493.77972412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SGLTVPTSPK_	ENSG00000150593|ENST00000280154|PDCD4;nc|ENSG00000150593|Q53EL6-2|PDCD4	59.93077597824379	0.36646980200755325	4				NaN	NaN	0	NaN	7118	3136	10251
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10257	28.101	NaN	4554.4	30	0	366.71	0.106	+			32749	RAPVPASEL	9	67	470.26604549725624	938.5175380613125	2	470.26629638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RAPVPASEL_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	56.72105179125745	0.24094814563026265	4				NaN	NaN	0	NaN	7119	3136	10251
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10258	28.103	NaN	7484.1	30	0	992.5	0.038				-1	ATQMVRMILK	10	74	603.8387789617067	1205.6630049902133	2	603.8387451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_ATQM(Oxidation (M))VRMILK_	ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5	33.921630207806714	0.6028135429846169	4				NaN	NaN	0	NaN	7120	3136	10251
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10274	28.134	NaN	12131	30	0	7214.2	0.214	+			29702	PHARPAVAL	9	69	466.27679641418626	930.5390398951726	2	466.2761535644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PHARPAVAL_	ENST00000453424.6_1_10:45952026-45952551:-|nuORF	50.0245360154114	0.3026755932229825	4				NaN	NaN	0	NaN	7133	3139	10273
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10275	28.138	NaN	4040.3	30	0	1622.4	0.106	+			23769	LCHVCCMKK	9	46	532.7460451048786	1063.477537276557	2	532.7459716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LCHVCCMKK_	ADAM10|p.P631Lfs*17|1|0.5|ENSG00000137845|chr15:58610430-58610430|G/-|frameshift_variant;ENSG00000137845|ENST00000260408|ADAM10;ENST00000396136.6_1_15:58889748-58968450:-|nuORF;ENST00000462061.1_1_15:58903171-58913692:-|nuORF;ENST00000470269.5_1_15:58902390-58913692:-|nuORF;nc|ENSG00000137845|O14672-2|ADAM10	35.200714571348534	0.47427825964483533	4				NaN	NaN	0	NaN	7134	3139	10273
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10276	28.14	NaN	7137.4	30	0	2184	0.106	+			21780	KQTENNYLE	9	59	569.772184742762	1137.5298165523238	2	569.7720947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KQTENNYLE_	ENSG00000109686|ENST00000604030|SH3D19;ENST00000478503.6_1_4:152043245-152086876:-|nuORF;LRBA-SH3D19|2|fusion;LRBA-SH3D19|3|fusion;nc|ENSG00000109686|Q5HYK7-2|SH3D19;nc|ENSG00000109686|Q5HYK7-3|SH3D19;nc|ENSG00000109686|Q5HYK7-4|SH3D19;nc|ENSG00000109686|Q5HYK7-5|SH3D19;nc|ENSG00000109686|Q5HYK7|SH3D19	22.579656572578934	0.5922287541734749	4				NaN	NaN	0	NaN	7135	3139	10273
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10277	28.142	NaN	4190.2	30	0	447.61	0.106			+	19661	KDLRTIVQI	9	65	543.3381299707956	1084.6617070083912	2	543.337646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KDLRTIVQI_	REV__ENST00000557739.1_1_14:35227840-35228035:-|nuORF	36.446750945000026	0.4619375763483977	4				NaN	NaN	0	NaN	7136	3139	10273
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10278	28.144	NaN	5681.3	30	0	787.01	0.106	+			39707	STIPPELVKQK	11	64	620.3689872388	1238.7234215443998	2	620.3689575195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STIPPELVKQK_	ENSG00000058729|ENST00000283109|RIOK2	25.891714612410027	0.7182082266701849	4				NaN	NaN	0	NaN	7137	3139	10273
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10279	28.145	NaN	2868.4	30	0	197.63	0.033	+			29043	NTAPHVVM	8	70	434.72035099331515	867.4261490534303	2	434.7204895019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NTAPHVVM_	ENST00000470383.1_1_1:24124993-24125323:-|nuORF	24.20275056022122	0.7724576178584145	4				NaN	NaN	0	NaN	7138	3139	10273
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10280	28.146	NaN	5881.2	30	0	841.49	0.143			+	-1	ICSSKWSFAK	10	64	607.3070068359375	NaN	0	607.3070068359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_IC(Carbamidomethyl (C))SSKWSFAK_	REV__ENSG00000141946|ENST00000269834|ZIM3	30.317721548370564	0.4006274431774794	4				NaN	NaN	0	NaN	7139	3139	10273
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10298	28.183	NaN	4155.7	30	0	1024.1	0.214	+			4167	ATFGTQVVEK	10	77	540.290492113375	1078.5664312935498	2	540.29052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATFGTQVVEK_	C3|p.A1045Pfs*26|1|0.09|ENSG00000125730|chr19:6694452-6694452|C/-|frameshift_variant;C3|p.S1008Rfs*8|3|0.41|ENSG00000125730|chr19:6694564-6694564|G/-|frameshift_variant;ENSG00000125730|ENST00000245907|C3	65.2775769800794	0.31784129392001936	4				NaN	NaN	0	NaN	7154	3142	10297
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10299	28.187	NaN	5896.6	30	0	938.19	0.106			+	12514	GEESVAKAIFI	11	68	582.3196692014563	1162.6247854697126	2	582.3200073242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEESVAKAIFI_	REV__ENSG00000003987|ENST00000180173|MTMR7;REV__nc|ENSG00000003987|Q9Y216-2|MTMR7	65.2775769800794	0.27634548443598095	4				NaN	NaN	0	NaN	7155	3142	10297
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10300	28.189	NaN	3602.8	30	0	500.03	0.106	+			6708	AYVYPPPVA	9	67	488.7602769397137	975.5060009462275	2	488.7602233886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AYVYPPPVA_	ENSG00000132471|ENST00000254806|WBP2;ENST00000416574.6_1_17:73843478-73851408:-|nuORF;ENST00000587642.5_1_17:73843478-73843967:-|nuORF;WBP2|p.M185*|1|0.26|ENSG00000132471|chr17:75847590-75847590|G/-|frameshift_variant	29.841539824830324	0.5243625958137083	4				NaN	NaN	0	NaN	7156	3142	10297
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10301	28.191	NaN	4444.7	30	0	625.03	0.106			+	33157	RETAENEWPP	10	70	614.7818655689463	1227.5491782046925	2	614.7825927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RETAENEWPP_	REV__ENSG00000134460|ENST00000379959|IL2RA	34.172542307311794	0.6007644933930345	4				NaN	NaN	0	NaN	7157	3142	10297
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10302	28.193	NaN	2982.9	30	0	488.04	0.106			+	-1	VGSAILAMIG	10	61	474.2657089159465	946.516864898693	2	474.2658996582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_VGSAILAM(Oxidation (M))IG_	REV__ENSG00000090020|ENST00000263980|SLC9A1;REV__nc|ENSG00000090020|P19634-2|SLC9A1	47.91560031466742	0.4762067885998563	4				NaN	NaN	0	NaN	7158	3142	10297
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10303	28.195	NaN	2148.5	30	0	239.04	0.035			+	8901	EEVAHVAAGL	10	52	498.2621942653624	994.5098355975248	2	498.2613525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EEVAHVAAGL_	REV__tr|U7T601|U7T601_FUSNUTryptophansynthasebetachainOS=FusobacteriumnucleatumCTI-5OX=1316586GN=trpBPE=3SV=1	38.80614096846853	0.5601458937078225	4				NaN	NaN	0	NaN	7159	3142	10297
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10304	28.195	NaN	2157	30	0	173.14	0.139	+			40591	SVAGLLPRR	9	63	484.80357296626863	967.5925929993373	2	484.8027648925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVAGLLPRR_	ENSG00000153214|ENST00000283206|TMEM87B;nc|ENSG00000153214|Q96K49-2|TMEM87B;TMEM87B|p.K111Nfs*14|1|0.26|ENSG00000153214|chr2:112066946-112066946|A/-|frameshift_variant;TMEM87B|p.N134Mfs*4|1|0.16|ENSG00000153214|chr2:112067013-112067013|A/-|frameshift_variant	66.42927471994793	0.16001998865088202	4				NaN	NaN	0	NaN	7160	3142	10297
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10322	28.234	NaN	10371	30	0	1291.8	0.214	+			38570	SSFGTILRK	9	80	504.79563233090323	1007.5767117286065	2	504.79534912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSFGTILRK_	BRCA2|p.E3316Rfs*11|1|0.3|ENSG00000139618|chr13:32398452-32398453|-/A|frameshift_variant;BRCA2|p.K1691Nfs*15|1|0.11|ENSG00000139618|chr13:32339422-32339422|A/-|frameshift_variant;BRCA2|p.N1544Tfs*24|1|0.22|ENSG00000139618|chr13:32338982-32338982|A/-|frameshift_variant;BRCA2|p.N1642Mfs*2|1|0.08|ENSG00000139618|chr13:32339277-32339277|A/-|frameshift_variant;BRCA2|p.N1784Tfs*7|1|0.4|ENSG00000139618|chr13:32339700-32339700|A/-|frameshift_variant;BRCA2|p.N986Kfs*2|1|0.32|ENSG00000139618|chr13:32337305-32337306|-/A|frameshift_variant;BRCA2|p.T2515Nfs*24|1|0.35|ENSG00000139618|chr13:32356530-32356531|-/A|frameshift_variant;BRCA2|p.T2685Hfs*9|1|0.05|ENSG00000139618|chr13:32363251-32363251|A/-|frameshift_variant;ENSG00000139618|ENST00000380152|BRCA2	90.60085204095205	0.06317133949006545	4				NaN	NaN	0	NaN	7175	3145	10321
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10323	28.238	NaN	8275.2	30	0	3226.3	0.106				-1	SKKFSCKIC	9	67	386.5325937507403	1156.575951852421	3	386.5325927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_SKKFSC(Carbamidomethyl (C))KIC(Carbamidomethyl (C))_	ENSG00000198026|ENST00000322927|ZNF335;nc|ENSG00000198026|Q9H4Z2-2|ZNF335;ZNF335|p.A1303Gfs*39|1|0.35|ENSG00000198026|chr20:45949073-45949074|AG/-|frameshift_variant	19.996771675451527	0.6112419832031292	4				NaN	NaN	0	NaN	7176	3145	10321
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10324	28.24	NaN	4016.8	30	0	1007.2	0.106				-1	 	0	59	349.16372844686936	696.3129039605387	2	349.16497802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7177	3145	10321
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10325	28.242	NaN	3273.9	30	0	240.01	0.106	+			25070	LLLKPGEEH	9	75	345.86606239861476	NaN	0	345.8659362792969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LLLKPGEEH_	CEP192|p.K1891Nfs*8|1|0.19|ENSG00000101639|chr18:13087068-13087068|A/-|frameshift_variant;CEP192|p.R2464Kfs*5|1|0.13|ENSG00000101639|chr18:13116476-13116477|-/AAATCCA|frameshift_variant;ENSG00000101639|ENST00000506447|CEP192;ENST00000513432.5_1_18:13059017-13124766:+|nuORF;nc|ENSG00000101639|Q8TEP8-1|CEP192;nc|ENSG00000101639|Q8TEP8-2|CEP192	42.47446043378293	0.25855550551448697	4				NaN	NaN	0	NaN	7178	3145	10321
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10326	28.244	NaN	2526.2	30	0	322.15	0.106	+			10320	ETRRALLR	8	57	507.81032051370624	1013.6060880942125	2	507.8099670410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ETRRALLR_	ENST00000577425.5_1_17:79849605-79852370:+|nuORF	42.47446043378293	0.6409579893742323	4				NaN	NaN	0	NaN	7179	3145	10321
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10327	28.245	NaN	2864.8	30	0	374.56	0.037			+	17750	IEQGIKFSQE	10	58	589.806800672824	1177.599048412448	2	589.8064575195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IEQGIKFSQE_	REV__ENSG00000009413|ENST00000368802|REV3L;REV__ENST00000462119.5_1_6:111628768-111636625:-|nuORF;REV__nc|ENSG00000009413|O60673-2|REV3L	50.033510581677724	0.4566913063131936	4				NaN	NaN	0	NaN	7180	3145	10321
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10328	28.246	NaN	3579.8	30	0	481.43	0.142			+	10839	FASLALEGGQF	11	54	570.2904230323867	NaN	0	570.2904052734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FASLALEGGQF_	REV__ENSG00000128039|ENST00000264228|SRD5A3	51.52775601994872	0.30434581687306933	4				NaN	NaN	0	NaN	7181	3145	10321
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10346	28.285	NaN	22437	30	0	4317.2	0.214			+	50123	WHVENSSSI	9	77	529.7477571028082	1057.4809612724164	2	529.7637329101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WHVENSSSI_	REV__ENSG00000141449|ENST00000424526|GREB1L;REV__ENST00000578955.1_1_18:19057140-19088617:+|nuORF;REV__GREB1L|p.G1039Qfs*16|1|0.06|ENSG00000141449|chr18:21495754-21495755|GG/-|frameshift_variant;REV__GREB1L|p.R837H|1|0.35|ENSG00000141449|chr18:21477310-21477310|G/A|missense_variant;REV__GREB1L|p.T1038Kfs*19|1|0.06|ENSG00000141449|chr18:21495751-21495752|-/AACT|frameshift_variant;REV__nc|ENSG00000141449|Q9C091-3|GREB1L	75.04331003522576	0.118981335847003	4				NaN	NaN	0	NaN	7196	3148	10345
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10347	28.288	NaN	6887.6	30	0	720.82	0.106	+			41544	SVQDSSVLVQR	11	67	609.3277632606295	1216.6409735880588	2	609.3279418945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVQDSSVLVQR_	ENSG00000083097|ENST00000349129|DOP1A	139.7601822506043	0.0005276873573507997	4				NaN	NaN	0	NaN	7197	3148	10345
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10348	28.291	NaN	5264.3	30	0	774.58	0.106				-1	EQCTCMET	8	69	537.6806031183024	1073.3466533034048	2	537.680908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C),Oxidation (M)	_EQC(Carbamidomethyl (C))TC(Carbamidomethyl (C))M(Oxidation (M))ET_	ENSG00000184347|ENST00000519560|SLIT3;nc|ENSG00000184347|O75094-2|SLIT3;nc|ENSG00000184347|O75094-3|SLIT3;nc|ENSG00000184347|O75094-4|SLIT3;SLIT3|p.P1113Hfs*108|1|0.38|ENSG00000184347|chr5:168685904-168685904|G/-|frameshift_variant	26.69291269510374	0.7532304684939817	4				NaN	NaN	0	NaN	7198	3148	10345
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10349	28.292	NaN	5961.1	30	0	1006.8	0.106				-1	KRKAMTTFLP	10	66	604.8440250381678	NaN	0	604.8453369140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_KRKAM(Oxidation (M))TTFLP_	ENST00000367545.7_1_6:145173639-145173798:+|nuORF	31.529811441608018	0.39664753963064203	4				NaN	NaN	0	NaN	7199	3148	10345
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10350	28.294	NaN	4316.6	30	0	552.12	0.106	+			20650	KGKKCFSSF	9	60	516.2707435340916	1030.526934134983	2	516.27197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KGKKCFSSF_	ENST00000393784.7_1_5:172379611-172379665:+|nuORF	34.172542307311794	0.4838870758800184	4				NaN	NaN	0	NaN	7200	3148	10345
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10351	28.296	NaN	3913.1	30	0	657.79	0.038			+	-1	KMLEGEEICD	10	68	612.2676890967101	1222.5208252602201	2	612.2678833007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_KMLEGEEIC(Carbamidomethyl (C))D_	REV__ENSG00000182670|ENST00000418766|TTC3;REV__ENST00000460328.5_1_21:38463688-38468944:+|nuORF;REV__ENST00000491952.1_1_21:38466330-38467745:+|nuORF;REV__TTC3|p.E1565Rfs*14|1|0.21|ENSG00000182670|chr21:37182840-37182841|-/A|frameshift_variant;REV__TTC3|p.E779Kfs*5|2|0.34|ENSG00000182670|chr21:37151943-37151943|A/-|frameshift_variant;REV__TTC3|p.E779Rfs*18|1|0.33|ENSG00000182670|chr21:37151942-37151943|-/A|frameshift_variant	31.529811441608018	0.6223461015008678	4				NaN	NaN	0	NaN	7201	3148	10345
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10352	28.297	NaN	3502.5	30	0	554.19	0.142			+	-1	AWRGAGGCRGP	11	62	572.7725247628582	NaN	0	572.7723388671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_AWRGAGGC(Carbamidomethyl (C))RGP_	REV__ENST00000519626.1_1_8:66754352-66754496:-|nuORF	25.57405402267927	0.45144328854727944	4				NaN	NaN	0	NaN	7202	3148	10345
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10365	28.325	NaN	29094	30	0	5099.3	0.214			+	50124	WHVENSSSI	9	76	529.7477571028082	1057.4809612724164	2	529.748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WHVENSSSI_	REV__ENSG00000141449|ENST00000424526|GREB1L;REV__ENST00000578955.1_1_18:19057140-19088617:+|nuORF;REV__GREB1L|p.G1039Qfs*16|1|0.06|ENSG00000141449|chr18:21495754-21495755|GG/-|frameshift_variant;REV__GREB1L|p.R837H|1|0.35|ENSG00000141449|chr18:21477310-21477310|G/A|missense_variant;REV__GREB1L|p.T1038Kfs*19|1|0.06|ENSG00000141449|chr18:21495751-21495752|-/AACT|frameshift_variant;REV__nc|ENSG00000141449|Q9C091-3|GREB1L	85.16082228582465	0.07850854922700509	4				NaN	NaN	0	NaN	7212	3151	10364
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10366	28.329	NaN	7658.9	30	0	2682	0.106	+			43836	TLSTRWPL	8	85	325.1866299869012	972.5380605609037	3	325.1870422363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TLSTRWPL_	ENST00000532535.5_1_11:3819166-3845134:+|nuORF	57.81127852772723	0.5234495074909924	4				NaN	NaN	0	NaN	7213	3151	10364
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10367	28.331	NaN	4420.8	30	0	547.95	0.106			+	1847	AIKITYNKG	9	99	336.5342216840962	NaN	0	336.5343933105469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AIKITYNKG_	REV__ENSG00000162733|ENST00000367921|DDR2	21.9598887501803	0.3626577482100488	4				NaN	NaN	0	NaN	7214	3151	10364
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10368	28.333	NaN	3463.8	30	0	661.23	0.106			+	26638	LVCSGCVSSLL	11	59	540.7756540810011	1079.5367552288021	2	540.7762451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LVCSGCVSSLL_	REV__ENST00000447799.5_1_12:104165049-104171017:-|nuORF	39.252832667884924	0.5681665794958463	4				NaN	NaN	0	NaN	7215	3151	10364
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10369	28.334	NaN	3450.9	30	0	583.67	0.106			+	9674	ELTWDKRLV	9	48	387.22144033707696	1158.6424916114308	3	387.2217102050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ELTWDKRLV_	REV__ENSG00000160299|ENST00000359568|PCNT;REV__nc|ENSG00000160299|O95613-2|PCNT	40.5726180659479	0.4135428067754104	4				NaN	NaN	0	NaN	7216	3151	10364
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10370	28.336	NaN	5831	30	0	2564.2	0.106	+			32280	QTMDMIISKK	10	69	597.8148088932428	1193.6150648532855	2	597.8157958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QTMDMIISKK_	ENSG00000117262|ENST00000313835|GPR89A;ENSG00000188092|ENST00000314163|GPR89B;ENST00000460277.5_1_1:145765021-145811987:-|nuORF;ENST00000478307.5_1_1:147400580-147440603:+|nuORF;nc|ENSG00000188092|B7ZAQ6-2|GPR89A;nc|ENSG00000188092|B7ZAQ6-3|GPR89A	89.02883481214508	0.13663399911061233	4				NaN	NaN	0	NaN	7217	3151	10364
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10371	28.338	NaN	4393.4	30	0	454.71	0.036	+			42975	TEKEVERIL	9	77	558.816100599024	1115.617648264848	2	559.31689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TEKEVERIL_	ENSG00000107672|ENST00000369023|NSMCE4A;ENST00000483541.1_1_10:123719867-123724812:-|nuORF;nc|ENSG00000107672|Q9NXX6-2|NSMCE4A	44.377184641726394	0.36891676396732553	4				NaN	NaN	0	NaN	7218	3151	10364
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10389	28.375	NaN	13590	30	0	6097.2	0.214				-1	 	0	59	424.7502356633734	847.4859183935469	2	424.750244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7233	3154	10388
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10390	28.378	NaN	15599	30	0	1263.9	0.106	+			20188	KEKYIDQEEL	10	92	647.830490333725	1293.64642773425	2	647.8300170898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEKYIDQEEL_	ENSG00000080824|ENST00000216281|HSP90AA1;ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000507090.2_1_4:13338641-13339112:+|nuORF;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;HSP90AA1|p.K419Nfs*3|1|0.25|ENSG00000080824|chr14:102083874-102083874|T/-|frameshift_variant;HSP90AA1|p.S330Qfs*48|1|0.21|ENSG00000080824|chr14:102084558-102084558|A/-|frameshift_variant;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000205940|Q58FF8|HSP90AB2P;nc|ENSG00000224411|Q14568|HSP90AA2P	176.59839592901017	0.0015875574101036562	4				NaN	NaN	0	NaN	7234	3154	10388
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10391	28.38	NaN	6153.8	30	0	713.35	0.106	+			44181	TQTQFFHVK	9	72	568.2986981452407	1134.5828433572813	2	568.298095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TQTQFFHVK_	ENSG00000163564|ENST00000368140|PYHIN1;ENSG00000163565|ENST00000295809|IFI16;ENST00000485134.1_1_1:158911778-158914889:+|nuORF;ENST00000493884.5_1_1:158984458-159022017:+|nuORF;nc|ENSG00000163564|Q6K0P9-2|PYHIN1;nc|ENSG00000163564|Q6K0P9-3|PYHIN1;nc|ENSG00000163564|Q6K0P9-4|PYHIN1;nc|ENSG00000163565|Q16666-2|IFI16;nc|ENSG00000163565|Q16666-3|IFI16;nc|ENSG00000163565|Q16666-6|IFI16;nc|ENSG00000163565|Q16666-8|IFI16	73.84112541714126	0.12417958948937492	4				NaN	NaN	0	NaN	7235	3154	10388
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10392	28.382	NaN	5937.8	30	0	773.86	0.106			+	31492	QLDLPVFTLA	10	72	558.816100599024	1115.617648264848	2	558.816650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QLDLPVFTLA_	REV__ENSG00000149452|ENST00000336232|SLC22A8;REV__nc|ENSG00000149452|Q8TCC7-2|SLC22A8;REV__nc|ENSG00000149452|Q8TCC7-4|SLC22A8;REV__nc|ENSG00000149452|Q8TCC7-5|SLC22A8	39.252832667884924	0.5560298534376815	4				NaN	NaN	0	NaN	7236	3154	10388
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10393	28.384	NaN	6912.7	30	0	921.15	0.106			+	-1	TVLMQAADKTE	11	73	611.8007037701996	NaN	0	611.80029296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_TVLM(Oxidation (M))QAADKTE_	REV__ENSG00000251369|ENST00000699333|ZNF550;REV__ENST00000595560.1_1_19:58067392-58071050:-|nuORF;REV__nc|ENSG00000251369|Q7Z398-2|ZNF550;REV__ZNF550|p.G109Efs*3|1|0.29|ENSG00000251369|chr19:57547918-57547918|C/-|frameshift_variant	25.125986553469783	0.45344013546260314	4				NaN	NaN	0	NaN	7237	3154	10388
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10394	28.386	NaN	6109.7	30	0	2177.2	0.036	+			25683	LRGPAAPGPVI	11	85	349.8816929740792	NaN	0	349.8816833496094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LRGPAAPGPVI_	PXDN|p.G470Rfs*19|1|0.14|ENSG00000130508|chr2:1664962-1664963|-/T|frameshift_variant	27.047317107675042	0.44487757903053116	4				NaN	NaN	0	NaN	7238	3154	10388
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10395	28.386	NaN	7397.9	30	0	1119	0.144				-1	KQHYCNTCGKT	11	60	670.298095703125	NaN	0	670.298095703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_KQHYCNTC(Carbamidomethyl (C))GKT_	ENSG00000103449|ENST00000251020|SALL1;nc|ENSG00000103449|Q9NSC2-2|SALL1	24.519189625965996	0.45614437233802635	4				NaN	NaN	0	NaN	7239	3154	10388
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10413	28.426	NaN	8519.9	30	0	2250.3	0.214			+	26401	LTEHNAHIQ	9	66	531.7696098734916	1061.5246668137831	2	531.7698364257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LTEHNAHIQ_	REV__ENSG00000185504|ENST00000327787|FAAP100;REV__nc|ENSG00000185504|Q0VG06-2|FAAP100;REV__nc|ENSG00000185504|Q0VG06-3|FAAP100	93.19546047674547	0.05585629608842056	4				NaN	NaN	0	NaN	7254	3157	10412
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10414	28.429	NaN	3757.2	30	0	853.07	0.106				-1	SMVMDHRG	8	55	474.704009775462	947.393466617724	2	474.70361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_SM(Oxidation (M))VMDHRG_	ENSG00000137872|ENST00000536845|SEMA6D;nc|ENSG00000137872|Q8NFY4-2|SEMA6D;nc|ENSG00000137872|Q8NFY4-3|SEMA6D;nc|ENSG00000137872|Q8NFY4-4|SEMA6D;nc|ENSG00000137872|Q8NFY4-5|SEMA6D;nc|ENSG00000137872|Q8NFY4-6|SEMA6D	25.450171626174864	0.7628259754767981	4				NaN	NaN	0	NaN	7255	3157	10412
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10415	28.431	NaN	5722.7	30	0	844.39	0.106			+	-1	WSWGCRKPNQ	10	67	659.8096832651719	1317.6048135971437	2	659.8089599609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_WSWGC(Carbamidomethyl (C))RKPNQ_	REV__ENST00000452532.1_1_X:55935206-56041316:+|nuORF	36.446750945000026	0.5818864909973037	4				NaN	NaN	0	NaN	7256	3157	10412
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10416	28.433	NaN	4280.4	30	0	445.41	0.106	+			32660	RAAPGTLPPLL	11	73	553.3407915403639	1104.6670301475276	2	553.3407592773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RAAPGTLPPLL_	ENST00000459862.1_1_1:205499484-205500503:+|nuORF	29.550750289552195	0.6798279264880025	4				NaN	NaN	0	NaN	7257	3157	10412
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10417	28.435	NaN	3641.5	30	0	452.31	0.106	+			10902	FDFRGARIL	9	62	547.8092081821493	1093.6038634310985	2	547.8094482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FDFRGARIL_	ENSG00000054179|ENST00000355097|ENTPD2;ENTPD2|p.G204Vfs*171|4|0.17|ENSG00000054179|chr9:137051065-137051065|C/-|frameshift_variant;nc|ENSG00000054179|Q9Y5L3-2|ENTPD2;nc|ENSG00000054179|Q9Y5L3-3|ENTPD2	37.81151784470057	0.4459294069877048	4				NaN	NaN	0	NaN	7258	3157	10412
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10418	28.437	NaN	3180.3	30	0	420.46	0.035	+			19792	KEAQAVPATL	10	55	514.293349821466	1026.572146709732	2	514.2922973632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KEAQAVPATL_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	39.873155843976775	0.5503138860789152	4				NaN	NaN	0	NaN	7259	3157	10412
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10419	28.437	NaN	4295.4	30	0	640.59	0.144			+	8230	EAESTLYQRLP	11	65	653.8358194428221	NaN	0	653.8357543945312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EAESTLYQRLP_	REV__ENST00000416636.2_1_7:23624683-23625604:-|nuORF	21.68575002086885	0.456735970842152	4				NaN	NaN	0	NaN	7260	3157	10412
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10437	28.475	NaN	9921.8	30	0	974.59	0.214	+			4561	ATLEETLVKK	10	81	566.3347473364419	1130.6549417396836	2	566.3346557617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATLEETLVKK_	ENSG00000254093|ENST00000314787|PINX1	128.51354385984777	0.015305610523191824	4				NaN	NaN	0	NaN	7275	3160	10436
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10438	28.479	NaN	7958.1	30	0	3290.7	0.106				-1	QVCPKYFMK	9	77	400.8679639236623	1199.5820623711868	3	400.8680725097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_QVC(Carbamidomethyl (C))PKYFMK_	ENSG00000138641|ENST00000402738|HERC3	32.81241826257853	0.4965981579233955	4				NaN	NaN	0	NaN	7276	3160	10436
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10439	28.481	NaN	4182.5	30	0	364.58	0.106	+			8569	EAWKHVEA	8	72	485.2431005858134	968.4716482384268	2	485.74456787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EAWKHVEA_	ENSG00000174238|ENST00000313486|PITPNA;ENST00000572004.1_1_17:1442150-1442237:-|nuORF	49.44154591367651	0.597725784090933	4				NaN	NaN	0	NaN	7277	3160	10436
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10440	28.483	NaN	5528.5	30	0	500.9	0.106			+	51059	YLKEGKEAI	9	84	350.86551903680834	1049.574727710625	3	350.8661804199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YLKEGKEAI_	REV__ENSG00000124126|ENST00000371941|PREX1;REV__nc|ENSG00000124126|Q8TCU6-3|PREX1;REV__PREX1|p.L957Pfs*50|1|0.25|ENSG00000124126|chr20:48650154-48650155|-/G|frameshift_variant	30.503639358989545	0.5181749237905803	4				NaN	NaN	0	NaN	7278	3160	10436
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10441	28.485	NaN	3798.1	30	0	674.83	0.106	+			21439	KNCEFLVNR	9	69	561.7923583984375	NaN	0	561.7923583984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KNCEFLVNR_	CCDC150|p.E447Sfs*3|1|0.16|ENSG00000144395|chr2:196676625-196676625|A/-|frameshift_variant;ENSG00000144395|ENST00000389175|CCDC150;ENST00000471033.5_1_2:197521363-197521654:+|nuORF;ENST00000471546.5_1_2:197504460-197531652:+|nuORF	31.529811441608018	0.3183796599642538	4				NaN	NaN	0	NaN	7279	3160	10436
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10442	28.486	NaN	3715.9	30	0	469.63	0.036	+			13014	GEVEKYQQL	9	59	547.279878316318	1092.545203699436	2	547.2800903320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GEVEKYQQL_	ENSG00000204220|ENST00000374606|PFDN6;ENST00000395134.3_1_6:33257633-33258228:+|nuORF;ENST00000491382.1_1_6:33257633-33258228:+|nuORF	37.81151784470057	0.4459294069877048	4				NaN	NaN	0	NaN	7280	3160	10436
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10443	28.487	NaN	3328.2	30	0	378.53	0.14			+	-1	DRQDIIQC	8	68	524.2483670144582	1046.4821810957162	2	524.247314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_DRQDIIQC(Carbamidomethyl (C))_	REV__DEPDC7|p.R454I|1|0.26|ENSG00000121690|chr11:33033280-33033280|G/T|missense_variant	34.172542307311794	0.6954784234644539	4				NaN	NaN	0	NaN	7281	3160	10436
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10461	28.525	NaN	16399	30	0	1823.7	0.214	+			3799	ATAGIIGVNR	10	77	486.2853371899415	970.556121446683	2	486.28521728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATAGIIGVNR_	CLTC-CEP95|1|fusion;CLTC|p.A1374*|1|0.05|ENSG00000141367|chr17:59683464-59683465|-/TA|frameshift_variant;CLTC|p.D632Yfs*7|1|0.15|ENSG00000141367|chr17:59666589-59666590|-/TTACA|frameshift_variant;ENSG00000141367|ENST00000269122|CLTC;ENST00000472129.3_1_17:57725612-57733400:+|nuORF;nc|ENSG00000141367|Q00610-2|CLTC	171.53180478179638	0.0031984508882113667	4				NaN	NaN	0	NaN	7296	3163	10460
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10462	28.529	NaN	5335.5	30	0	454.89	0.106	+			35920	SEFQKAVKL	9	72	525.3030898563953	1048.5916267795906	2	525.3030395507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEFQKAVKL_	EDEM1|p.P273Lfs*15|1|0.38|ENSG00000134109|chr3:5201882-5201882|C/-|frameshift_variant;ENSG00000134109|ENST00000256497|EDEM1;nc|ENSG00000134109|Q92611-2|EDEM1	87.69643885390035	0.07135982304947239	4				NaN	NaN	0	NaN	7297	3163	10460
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10463	28.531	NaN	3308.9	30	0	305.49	0.106	+			10574	EYIHRIGR	8	62	348.530461035422	NaN	0	348.5305480957031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EYIHRIGR_	DDX43|p.V572I|1|0.1|ENSG00000080007|chr6:73414655-73414655|G/A|missense_variant;ENSG00000125485|ENST00000372159|DDX31;ENSG00000278053|ENST00000617633|DDX52;nc|ENSG00000125485|Q9H8H2|DDX31	28.2542754592877	1.7418937515398478	4				NaN	NaN	0	NaN	7298	3163	10460
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10464	28.533	NaN	6068.7	30	0	754.42	0.106			+	13258	GIRKEIEGIVP	11	70	605.8609070638682	1209.7072611945364	2	605.8612060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GIRKEIEGIVP_	REV__tr|U7SUG8|U7SUG8_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01230PE=3SV=1	44.377184641726394	0.49804979881800077	4				NaN	NaN	0	NaN	7299	3163	10460
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10465	28.535	NaN	4663.2	30	0	823.55	0.106	+			9435	EKKQPVDLGLL	11	58	620.3689872388	1238.7234215443998	2	620.3683471679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EKKQPVDLGLL_	ENSG00000127922|ENST00000248566|SEM1;ENST00000476463.1_1_7:96337506-96339075:-|nuORF	15.33747794439485	0.7986731847593809	4				NaN	NaN	0	NaN	7300	3163	10460
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10466	28.537	NaN	3196.6	30	0	934.43	0.038			+	-1	KKLFCFVRL	9	56	404.24343197387105	NaN	0	404.2436828613281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_KKLFC(Carbamidomethyl (C))FVRL_	REV__ENST00000555414.5_1_14:20925832-20925862:+|nuORF	19.1035232394073	0.3723251548669699	4				NaN	NaN	0	NaN	7301	3163	10460
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10467	28.537	NaN	2584.3	30	0	315.91	0.14			+	25174	LLWKSPKR	8	69	514.3221361555989	NaN	0	514.32177734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LLWKSPKR_	REV__ENSG00000165671|ENST00000439151|NSD1;REV__ENST00000375350.3_1_5:176662823-176666819:+|nuORF;REV__nc|ENSG00000165671|Q96L73-2|NSD1;REV__nc|ENSG00000165671|Q96L73-3|NSD1;REV__NSD1|p.K1753Sfs*10|1|0.17|ENSG00000165671|chr5:177267669-177267669|A/-|frameshift_variant	26.69291269510374	1.7418937515398478	4				NaN	NaN	0	NaN	7302	3163	10460
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10485	28.574	NaN	10222	30	0	1572.5	0.214	+			49492	VVYTSHLQLK	10	79	594.342798450485	1186.67104396777	2	594.3429565429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVYTSHLQLK_	ENSG00000015568|ENST00000016946|RGPD5;ENSG00000153165|ENST00000409886|RGPD3;ENSG00000153201|ENST00000283195|RANBP2;ENSG00000169629|ENST00000302558|RGPD8;ENSG00000183054|ENST00000329516|RGPD6;ENSG00000185304|ENST00000398146|RGPD2;ENSG00000187627|ENST00000641458|RGPD1;ENSG00000196862|ENST00000408999|RGPD4;ENST00000522286.5_1_2:113158797-113161561:-|nuORF;nc|ENSG00000183054|Q99666-2|RGPD5;nc|ENSG00000187627|P0DJD0|RGPD1;RANBP2|p.A864Lfs*3|1|0.3|ENSG00000153201|chr2:108758533-108758533|G/-|frameshift_variant;RANBP2|p.C2737Vfs*35|1|0.18|ENSG00000153201|chr2:108772957-108772957|T/-|frameshift_variant;RANBP2|p.F3068Lfs*10|1|0.06|ENSG00000153201|chr2:108782692-108782692|T/-|frameshift_variant;RANBP2|p.H3114Sfs*18|1|0.33|ENSG00000153201|chr2:108782827-108782828|-/T|frameshift_variant;RANBP2|p.K1989Nfs*9|1|0.05|ENSG00000153201|chr2:108766505-108766506|-/TATCCTG|frameshift_variant;RANBP2|p.K2576Nfs*63|2|0.22|ENSG00000153201|chr2:108768262-108768262|A/-|frameshift_variant;RANBP2|p.S1486Rfs*51|1|0.05|ENSG00000153201|chr2:108764996-108764997|-/ATTTTGTATTC|frameshift_variant;RGPD2|p.F1350Lfs*25|1|0.25|ENSG00000185304|chr2:87782974-87782974|A/-|frameshift_variant;RGPD3|p.V1441*|1|0.45|ENSG00000153165|chr2:106423647-106423647|T/-|frameshift_variant;RGPD4|p.K568Nfs*33|1|0.14|ENSG00000196862|chr2:107859787-107859787|A/-|frameshift_variant	147.73206827945663	0.008898223230177705	4				NaN	NaN	0	NaN	7317	3166	10484
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10486	28.578	NaN	3257.7	30	0	270.49	0.106	+			36060	SEITTKDL	8	73	453.74251047277886	905.4704680123577	2	453.7423400878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEITTKDL_	ENSG00000187514|ENST00000409115|PTMA;ENST00000468027.5_1_2:232573416-232577283:+|nuORF;nc|ENSG00000187514|P06454|PTMA	90.36981228632155	0.27635063874291205	4				NaN	NaN	0	NaN	7318	3166	10484
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10487	28.58	NaN	10629	30	0	3099.1	0.106	+			49750	VYPDGIRHI	9	68	535.2931562293675	1068.5717595255348	2	535.2933349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYPDGIRHI_	ENSG00000189091|ENST00000302516|SF3B3;ENST00000568291.2_1_16:70588380-70590279:+|nuORF	59.93077597824379	0.21419174904018318	4				NaN	NaN	0	NaN	7319	3166	10484
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10488	28.582	NaN	4214.4	30	0	723.4	0.106			+	1296	AESPQSLNYR	10	66	582.7838134765625	NaN	0	582.7838134765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AESPQSLNYR_	REV__ENSG00000132005|ENST00000254325|RFX1	36.446750945000026	0.3805027428805705	4				NaN	NaN	0	NaN	7320	3166	10484
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10489	28.583	NaN	6769.7	30	0	4370.1	0.106			+	604	ADQFGFLVV	9	51	498.2621942653624	994.5098355975248	2	498.263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ADQFGFLVV_	REV__ENSG00000197442|ENST00000359015|MAP3K5;REV__nc|ENSG00000197442|Q99683-2|MAP3K5	24.20275056022122	0.577060078256802	4				NaN	NaN	0	NaN	7321	3166	10484
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10490	28.585	NaN	6568.5	30	0	592.97	0.106	+			41125	SVISTDPLKR	10	74	558.3249898742887	1114.6354268153773	2	558.82666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVISTDPLKR_	ENSG00000187741|ENST00000389301|FANCA;FANCA|p.E800Gfs*16|1|0.13|ENSG00000187741|chr16:89769934-89769944|CATCCACCTCT/-|frameshift_variant;FANCA|p.G972Afs*17|1|0.37|ENSG00000187741|chr16:89758643-89758643|C/-|frameshift_variant;FANCA|p.V925Rfs*18|1|0.2|ENSG00000187741|chr16:89764895-89764896|-/G|frameshift_variant;nc|ENSG00000187741|O15360-3|FANCA	58.62960593111931	0.3783037861296717	4				NaN	NaN	0	NaN	7322	3166	10484
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10491	28.587	NaN	6007.7	30	0	695.58	0.037	+			32576	QWQLDQKIP	9	65	578.3119840922828	1154.6094152513656	2	578.814208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QWQLDQKIP_	ENST00000368444.7_1_6:123100853-123100973:+|nuORF	65.46538089061403	0.16805504838372562	4				NaN	NaN	0	NaN	7323	3166	10484
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10508	28.622	NaN	12922	30	0	1833.4	0.215	+			49623	VYHNLKNVI	9	94	367.21314955547	1098.61761926661	3	367.2132873535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYHNLKNVI_	ENO1|p.D318Mfs*5|1|0.43|ENSG00000074800|chr1:8864006-8864006|C/-|frameshift_variant;ENSG00000074800|ENST00000234590|ENO1;ENST00000464920.1_1_1:8921421-8930582:-|nuORF;nc|ENSG00000074800|P06733-2|ENO1	56.72105179125745	0.24094814563026265	4				NaN	NaN	0	NaN	7337	3169	10507
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10509	28.625	NaN	6183.2	30	0	1001.2	0.106	+			34083	RSPPPGMGL	9	68	456.2419443358612	910.4693357385224	2	456.2417297363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RSPPPGMGL_	ENSG00000116560|ENST00000357214|SFPQ;nc|ENSG00000116560|P23246-2|SFPQ	71.87747018426188	0.13267044672804276	4				NaN	NaN	0	NaN	7338	3169	10507
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10510	28.627	NaN	11581	30	0	1726.7	0.106	+			40938	SVFSICHSK	9	78	504.2525336848161	1006.4905144364322	2	504.2522888183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVFSICHSK_	ENSG00000198788|ENST00000675028|MUC2;nc|ENSG00000198788|Q02817|MUC2	132.757866228626	0.013877640931359021	4				NaN	NaN	0	NaN	7339	3169	10507
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10511	28.629	NaN	4385.9	30	0	2781.6	0.106			+	-1	LVRCLPTH	8	50	498.27711096338	994.53966899356	2	498.27691650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_LVRC(Carbamidomethyl (C))LPTH_	REV__VPS52|p.Q497Pfs*33|1|0.25|ENSG00000223501|chr6:33264408-33264409|-/G|frameshift_variant	42.47446043378293	0.6409579893742323	4				NaN	NaN	0	NaN	7340	3169	10507
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10512	28.631	NaN	3948.4	30	0	407.23	0.106				-1	IVVEHIIMK	9	65	549.3232495802686	1096.631946227337	2	549.3233642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_IVVEHIIM(Oxidation (M))K_	ENSG00000109133|ENST00000504986|TMEM33;TMEM33|p.L211P|1|0.2|ENSG00000109133|chr4:41954087-41954087|T/C|missense_variant	49.44154591367651	0.3095138337212152	4				NaN	NaN	0	NaN	7341	3169	10507
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10513	28.633	NaN	7318	30	0	664.85	0.106	+			47366	VPGEVEMVK	9	71	494.2624083751966	NaN	0	494.2642517089844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VPGEVEMVK_	ENSG00000102882|ENST00000263025|MAPK3;nc|ENSG00000102882|P27361-2|MAPK3;nc|ENSG00000102882|P27361-3|MAPK3	42.396135135203025	0.2590952873412954	4				NaN	NaN	0	NaN	7342	3169	10507
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10514	28.634	NaN	2967.4	30	0	251.81	0.035			+	30287	PTKKFLER	8	60	509.8060003920274	1017.5974478508548	2	509.8056335449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PTKKFLER_	REV__ENSG00000158435|ENST00000289382|CNOT11	54.776311868738084	0.5534952410049249	4				NaN	NaN	0	NaN	7343	3169	10507
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10533	28.671	NaN	6809.4	30	0	1798.3	0.214			+	-1	IRCSKLLV	8	79	330.20412551269857	NaN	0	330.2058410644531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_IRC(Carbamidomethyl (C))SKLLV_	REV__ENST00000556254.1_1_14:35579616-35591165:-|nuORF	27.882242232435846	1.7418937515398478	4				NaN	NaN	0	NaN	7359	3172	10532
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10534	28.675	NaN	19575	30	0	11590	0.106			+	-1	MIKPIIRQ	8	77	338.87547212947305	1013.6045869886192	3	338.8757019042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_M(Oxidation (M))IKPIIRQ_	REV__nc|ENSG00000157965|Q7RTT4|SSX8P;REV__nc|ENSG00000171483|Q7RTT6|SSX6P	23.04248740728303	0.7814162927298575	4				NaN	NaN	0	NaN	7360	3172	10532
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10535	28.677	NaN	8143.5	30	0	939	0.106	+			49624	VYHNLKNVI	9	96	367.21314955547	1098.61761926661	3	367.2132873535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYHNLKNVI_	ENO1|p.D318Mfs*5|1|0.43|ENSG00000074800|chr1:8864006-8864006|C/-|frameshift_variant;ENSG00000074800|ENST00000234590|ENO1;ENST00000464920.1_1_1:8921421-8930582:-|nuORF;nc|ENSG00000074800|P06733-2|ENO1	39.252832667884924	0.4290233611298554	4				NaN	NaN	0	NaN	7361	3172	10532
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10536	28.679	NaN	7404.5	30	0	1296.6	0.106	+			49033	VVHGGMSIFLK	11	104	401.8897678059699	1202.6474740181097	3	401.88995361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_VVHGGM(Oxidation (M))SIFLK_	ENST00000264995.7_1_3:131220431-131221595:-|nuORF	77.53327743719008	0.17293716712445248	4				NaN	NaN	0	NaN	7362	3172	10532
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10537	28.681	NaN	6428.5	30	0	841.29	0.106	+			15681	GVMTPLIKR	9	77	507.8097804138674	NaN	0	507.81005859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GVMTPLIKR_	ENSG00000126803|ENST00000247207|HSPA2	79.71258880314673	0.07236858429579222	4				NaN	NaN	0	NaN	7363	3172	10532
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10538	28.683	NaN	4753.2	30	0	652.67	0.037	+			10061	ESGQTWPWR	9	58	573.7723297485646	NaN	0	573.772216796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ESGQTWPWR_	nc|ENSG00000162729|Q969P0-2|IGSF8	32.81241826257853	0.3119040447479903	4				NaN	NaN	0	NaN	7364	3172	10532
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10539	28.683	NaN	3417.6	30	0	507.96	0.141			+	-1	SGCGYGCGCF	10	58	555.1792222628549	1108.3438915925096	2	555.1798095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term),2 Carbamidomethyl (C)	_(Acetyl (Protein N-term))SGC(Carbamidomethyl (C))GYGC(Carbamidomethyl (C))GCF_	REV__ENSG00000186930|ENST00000334897|KRTAP6-2;REV__KRTAP6-2|p.F48L|1|0.51|ENSG00000186930|chr21:30598731-30598731|G/T|missense_variant	12.206847966760668	0.7544206824696849	4				NaN	NaN	0	NaN	7365	3172	10532
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10557	28.722	NaN	21165	30	0	2280.6	0.215	+			5324	ATVLYIVKK	9	80	517.834320984553	1033.6540890359058	2	517.833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATVLYIVKK_	ENSG00000113734|ENST00000351486|BNIP1;nc|ENSG00000113734|Q12981-1|BNIP1;nc|ENSG00000113734|Q12981-2|BNIP1;nc|ENSG00000113734|Q12981-3|BNIP1	164.45504665044191	0.003713414289755139	4				NaN	NaN	0	NaN	7380	3175	10556
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10558	28.725	NaN	6208.4	30	0	870.02	0.106	+			14552	GTFGATSLQQR	11	69	583.3018760297882	1164.5891991263763	2	583.3018188476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTFGATSLQQR_	ENSG00000243667|ENST00000295121|DNAAF10;ENST00000492039.6_1_2:68352461-68384592:-|nuORF;nc|ENSG00000243667|Q96MX6-2|DNAAF10	129.00119753178808	0.0028781539983950004	4				NaN	NaN	0	NaN	7381	3175	10556
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10559	28.727	NaN	4470.3	30	0	470.87	0.106			+	43478	TGPALHTIVV	10	88	336.5342216840962	NaN	0	336.5339660644531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TGPALHTIVV_	REV__ENSG00000153048|ENST00000311052|CARHSP1	23.04248740728303	0.42010282974921537	4				NaN	NaN	0	NaN	7382	3175	10556
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10560	28.729	NaN	4503	30	0	698.2	0.106	+			23233	KYICENQDSI	10	63	635.2933778271537	1268.5722027211073	2	635.2929077148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_KYIC(Carbamidomethyl (C))ENQDSI_	ALB|p.V457Wfs*25|1|0.2|ENSG00000163631|chr4:73417606-73417606|A/-|frameshift_variant;CON__P02768-1;ENSG00000163631|ENST00000295897|ALB;nc|ENSG00000163631|P02768-2|ALB	59.93077597824379	0.36646980200755325	4				NaN	NaN	0	NaN	7383	3175	10556
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10561	28.731	NaN	3669.4	30	0	667.46	0.106	+			5019	ATSDLAIIARK	11	73	579.8456579082965	NaN	0	579.8458251953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATSDLAIIARK_	DHX38|p.A739Pfs*17|1|0.38|ENSG00000140829|chr16:72105086-72105086|G/-|frameshift_variant;DHX38|p.G603Efs*22|1|0.36|ENSG00000140829|chr16:72103767-72103767|G/-|frameshift_variant;DHX38|p.G697Wfs*16|1|0.38|ENSG00000140829|chr16:72104557-72104558|-/T|frameshift_variant;ENSG00000140829|ENST00000268482|DHX38;ENST00000566329.1_1_16:72134993-72137705:+|nuORF	85.86182877749512	0.053570322418330305	4				NaN	NaN	0	NaN	7384	3175	10556
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10562	28.733	NaN	5279.3	30	0	777.27	0.039	+			46824	VIDQDMATRLK	11	72	645.3480840689449	1288.6816152046897	2	645.3475952148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VIDQDMATRLK_	ENSG00000096696|ENST00000379802|DSP;nc|ENSG00000096696|P15924-2|DSP;nc|ENSG00000096696|P15924-3|DSP	46.95498715874613	0.46277758983638906	4				NaN	NaN	0	NaN	7385	3175	10556
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10563	28.733	NaN	1850.5	30	0	248.92	0.142	+			48059	VSSLVPSAQA	10	53	479.7647705078125	NaN	0	479.7647705078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VSSLVPSAQA_	ENST00000470306.5_1_1:156126086-156128580:+|nuORF	31.529811441608018	0.39664753963064203	4				NaN	NaN	0	NaN	7386	3175	10556
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10581	28.771	NaN	21021	30	0	5944.2	0.214			+	43821	TLQYIKNYL	9	99	385.8850271179816	NaN	0	385.8850402832031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TLQYIKNYL_	REV__ENSG00000119457|ENST00000374228|SLC46A2	49.44154591367651	0.21054156626303966	4				NaN	NaN	0	NaN	7401	3178	10580
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10582	28.775	NaN	7047.4	30	0	958.36	0.106	+			24902	LKMMETLE	8	61	497.7514310055185	993.488309077837	2	497.75103759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LKMMETLE_	ENSG00000165181|ENST00000682961|SHOC1;nc|ENSG00000165181|Q5VXU9-2|SHOC1;nc|ENSG00000165181|Q5VXU9-3|SHOC1;nc|ENSG00000165181|Q5VXU9|SHOC1	79.45101966838831	0.3281480470254892	4				NaN	NaN	0	NaN	7402	3178	10580
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10583	28.777	NaN	8606.1	30	0	1145	0.106	+			26606	LTYEFVKQK	9	73	578.3242260090353	1154.6338990848706	2	578.3239135742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LTYEFVKQK_	ENSG00000179222|ENST00000326587|MAGED1;ENST00000494718.5_1_X:51641614-51641740:+|nuORF;MAGED1|p.P628Rfs*18|1|0.09|ENSG00000179222|chrX:51900215-51900215|C/-|frameshift_variant;nc|ENSG00000179222|Q9Y5V3-2|MAGED1	146.78539889680295	0.007618400906539062	4				NaN	NaN	0	NaN	7403	3178	10580
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10584	28.779	NaN	7151.7	30	0	691.64	0.106	+			38029	SPNSLTLANIV	11	69	564.816850946437	1127.6191489596738	2	564.8175048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SPNSLTLANIV_	ENST00000477982.2_1_13:77575078-77575330:-|nuORF	63.53385203322761	0.2919106290768168	4				NaN	NaN	0	NaN	7404	3178	10580
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10585	28.781	NaN	13387	30	0	1829.4	0.106			+	28876	NQAAVQAVTTI	11	86	558.3066785667479	1114.5988042002957	2	558.3059692382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NQAAVQAVTTI_	REV__nc|ENSG858|P60608|ERVFC1-1	68.78561909154949	0.24586362119257035	4				NaN	NaN	0	NaN	7405	3178	10580
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10586	28.782	NaN	4654.8	30	0	841.21	0.036	+			46304	VEKEMRVTL	9	63	552.8079181071696	1103.601283281139	2	552.8079833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VEKEMRVTL_	DYNC1H1|p.F2635Lfs*67|1|0.16|ENSG00000197102|chr14:102017141-102017141|T/-|frameshift_variant;DYNC1H1|p.G1902Vfs*27|2|0.27|ENSG00000197102|chr14:102006154-102006154|G/-|frameshift_variant;DYNC1H1|p.K3112Hfs*3|1|0.31|ENSG00000197102|chr14:102027998-102027999|-/TCACAAG|frameshift_variant;DYNC1H1|p.W4201Gfs*43|1|0.42|ENSG00000197102|chr14:102043958-102043958|G/-|frameshift_variant;ENSG00000197102|ENST00000360184|DYNC1H1	41.42661286455405	0.403525789677298	4				NaN	NaN	0	NaN	7406	3178	10580
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10587	28.783	NaN	6241.7	30	0	896.52	0.14			+	-1	LIFCMMLL	8	67	528.7696494505899	1055.5247459679797	2	528.7693481445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C),Oxidation (M)	_LIFC(Carbamidomethyl (C))M(Oxidation (M))MLL_	REV__ENSG00000099194|ENST00000370355|SCD	54.89457262308372	0.5523244765420926	4				NaN	NaN	0	NaN	7407	3178	10580
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10605	28.822	NaN	7493.8	30	0	2598.2	0.215				-1	 	0	73	329.21802596823557	656.4214990032712	2	329.2182312011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7422	3181	10604
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10606	28.826	NaN	6677.7	30	0	575.45	0.106	+			20289	KENSPEKFAL	10	79	581.8093986807024	1161.6042444282048	2	581.8090209960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KENSPEKFAL_	ENSG00000099956|ENST00000644036|SMARCB1;nc|ENSG00000099956|Q12824-2|SMARCB1	115.23196543181992	0.034063879665207575	4				NaN	NaN	0	NaN	7423	3181	10604
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10607	28.828	NaN	6364.4	30	0	2452.4	0.106	+			50927	YGQQSTATL	9	55	484.7378293621888	967.4611057911776	2	484.7375793457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YGQQSTATL_	ENSG00000154134|ENST00000397801|ROBO3;ENST00000527245.5_1_11:124747729-124748693:+|nuORF	62.107414245175825	0.1960472003779324	4				NaN	NaN	0	NaN	7424	3181	10604
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10608	28.83	NaN	2663.8	30	0	836.41	0.106	+			34114	RSRQGSAR	8	60	459.25584558864324	NaN	0	459.25567626953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RSRQGSAR_	ENSG00000250571|ENST00000340042|GLI4;ENST00000523812.1_1_8:144357822-144358971:+|nuORF	47.657333605630114	1.7418937515398478	4				NaN	NaN	0	NaN	7425	3181	10604
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10609	28.832	NaN	5597.7	30	0	792.65	0.106	+			41985	SVYEGKIFTQK	11	72	650.3511737547659	1298.6877945763317	2	650.3506469726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVYEGKIFTQK_	AHCTF1|p.E1870Kfs*19|1|0.27|ENSG00000153207|chr1:246850426-246850426|T/-|frameshift_variant;ENSG00000153207|ENST00000648844|AHCTF1;ENST00000420969.1_1_2:162357792-162360000:-|nuORF;ENST00000470300.5_1_1:247004234-247028597:-|nuORF;ENST00000483900.1_1_1:247015289-247040365:-|nuORF;nc|ENSG00000153207|Q8WYP5-2|AHCTF1;nc|ENSG00000153207|Q8WYP5-3|AHCTF1	28.5767321226876	0.690044582712672	4				NaN	NaN	0	NaN	7426	3181	10604
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10610	28.833	NaN	3420.5	30	0	661.91	0.037			+	-1	FPRMWLLGL	9	69	574.8192138671875	NaN	0	574.8192138671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_FPRM(Oxidation (M))WLLGL_	REV__ENST00000267085.8_2_12:53566404-53567181:-|nuORF;REV__ENST00000424845.5_1_12:53564215-53567250:-|nuORF	47.91560031466742	0.22105767942158736	4				NaN	NaN	0	NaN	7427	3181	10604
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10611	28.834	NaN	5216.6	30	0	661.71	0.144	+			11030	FEKSKEQLTPL	11	67	660.3648479412315	1318.7151429492628	2	660.3638305664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FEKSKEQLTPL_	ENSG00000158874|ENST00000367990|APOA2	58.2462437865262	0.33910980880557884	4				NaN	NaN	0	NaN	7428	3181	10604
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10629	28.873	NaN	10153	30	0	767.57	0.214	+			28122	NAIKESYDY	9	71	551.7565541921348	1101.4985554510695	2	551.7566528320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAIKESYDY_	EED|p.H305Qfs*14|1|0.09|ENSG00000074266|chr11:86268500-86268501|-/AGACATAC|frameshift_variant;ENSG00000074266|ENST00000263360|EED;ENST00000525244.5_1_11:85956313-85988207:+|nuORF;nc|ENSG00000074266|O75530-2|EED;nc|ENSG00000074266|O75530-3|EED	143.8867514904718	0.008656634767784652	4				NaN	NaN	0	NaN	7443	3184	10628
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10630	28.876	NaN	9253	30	0	2123.7	0.106			+	-1	FSLMKLFI	8	103	338.86247141632293	NaN	0	338.86248779296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_FSLM(Oxidation (M))KLFI_	REV__ENST00000513042.6_1_5:73045695-73045764:+|nuORF	38.80614096846853	1.7418937515398478	4				NaN	NaN	0	NaN	7444	3184	10628
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10631	28.878	NaN	4417.6	30	0	540.66	0.106	+			11753	FSHSVGTSL	9	63	467.7353425565087	933.4561321798175	2	467.73480224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FSHSVGTSL_	ENSG00000188603|ENST00000636147|CLN3;ENST00000564574.5_2_16:28493646-28503072:-|nuORF;ENST00000566083.6_2_16:28493835-28503080:-|nuORF;nc|ENSG00000261832|Q13286-2|CLN3;nc|ENSG00000261832|Q13286-3|CLN3;nc|ENSG00000261832|Q13286-4|CLN3;nc|ENSG00000261832|Q13286-5|CLN3;nc|ENSG00000261832|Q13286-7|CLN3	68.78682469695295	0.14603441672067394	4				NaN	NaN	0	NaN	7445	3184	10628
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10632	28.88	NaN	2813.6	30	0	419.39	0.106	+			35189	SAIQRQEK	8	53	480.26883284767683	958.5231127621537	2	480.2689514160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SAIQRQEK_	ENSG00000101773|ENST00000327155|RBBP8;nc|ENSG00000101773|Q99708-2|RBBP8;nc|ENSG00000101773|Q99708-3|RBBP8	56.72105179125745	0.5342425954139568	4				NaN	NaN	0	NaN	7446	3184	10628
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10633	28.882	NaN	3149.8	30	0	365.89	0.106				-1	CWKGQGACQ	9	66	547.7291007257106	1093.4436485182212	2	547.7288208007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))WKGQGAC(Carbamidomethyl (C))Q_	ENSG00000180383|ENST00000317676|DEFB124	30.503639358989545	0.5181749237905803	4				NaN	NaN	0	NaN	7447	3184	10628
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10634	28.884	NaN	5994.9	30	0	773.89	0.039	+			33107	RELTGLKALYE	11	80	646.8640772447909	1291.7136015563817	2	646.8637084960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RELTGLKALYE_	ENSG00000113368|ENST00000261366|LMNB1;LMNB1|p.Q183Tfs*5|1|0.35|ENSG00000113368|chr5:126805594-126805595|-/A|frameshift_variant	32.75053402867276	0.6462648045997152	4				NaN	NaN	0	NaN	7448	3184	10628
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10652	28.921	NaN	3804.1	30	0	385.84	0.214	+			1335	AETLGALASVV	11	60	515.7929529332429	1029.5713529332857	2	515.792724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AETLGALASVV_	ENST00000497341.5_1_2:27480525-27481182:-|nuORF	58.22992032128504	0.3392555181951113	4				NaN	NaN	0	NaN	7463	3187	10651
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10653	28.924	NaN	5680.2	30	0	624.55	0.106	+			36572	SFSRAAAAMAP	11	64	540.2692858610885	1078.524018788977	2	540.269775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SFSRAAAAMAP_	ENSG00000126432|ENST00000265462|PRDX5;nc|ENSG00000126432|P30044-3|PRDX5;nc|ENSG00000126432|P30044-4|PRDX5	39.252832667884924	0.5681665794958463	4				NaN	NaN	0	NaN	7464	3187	10651
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10654	28.926	NaN	4612	30	0	922.77	0.106	+			10937	FDSLRRLY	8	67	535.2931562293675	1068.5717595255348	2	535.2935180664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FDSLRRLY_	RECQL5|p.F29Lfs*13|1|0.28|ENSG00000108469|chr17:75666471-75666471|A/-|frameshift_variant	40.77816245573522	0.6514838689002179	4				NaN	NaN	0	NaN	7465	3187	10651
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10655	28.928	NaN	3976.4	30	0	928.8	0.106	+			31380	QKGIRYDLC	9	62	576.7963658022193	1151.5781786712384	2	576.7957153320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_QKGIRYDLC(Carbamidomethyl (C))_	ENSG00000101945|ENST00000376687|SUV39H1;nc|ENSG00000101945|O43463-2|SUV39H1	42.396135135203025	0.392153681582562	4				NaN	NaN	0	NaN	7466	3187	10651
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10656	28.93	NaN	3023.1	30	0	466.99	0.106			+	16567	HFHRCSTAHP	10	52	596.7747159335926	NaN	0	596.774658203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HFHRCSTAHP_	REV__ENSG00000141622|ENST00000269439|RNF165;REV__RNF165|p.E286Rfs*22|1|0.34|ENSG00000141622|chr18:46456009-46456009|G/-|frameshift_variant	21.9598887501803	0.4201028297492154	4				NaN	NaN	0	NaN	7467	3187	10651
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10657	28.932	NaN	2403.5	30	0	289.33	0.036	+			26602	LTYDIANNK	9	64	526.2740599868122	NaN	0	526.2737426757812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LTYDIANNK_	ENSG00000115808|ENST00000263918|STRN;nc|ENSG00000115808|O43815-2|STRN	42.86426827375447	0.2558691296974908	4				NaN	NaN	0	NaN	7468	3187	10651
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10658	28.932	NaN	4808.6	30	0	756.88	0.143			+	20465	KEVLQQAVGLR	11	60	620.8706777817597	NaN	0	620.8711547851562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KEVLQQAVGLR_	REV__ENSG00000165138|ENST00000353234|ANKS6;REV__nc|ENSG00000165138|Q68DC2-3|ANKS6;REV__nc|ENSG00000165138|Q68DC2-4|ANKS6	27.047317107675042	0.44487757903053116	4				NaN	NaN	0	NaN	7469	3187	10651
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10676	28.97	NaN	6896.4	30	0	1615	0.214	+			34084	RSPPPGMGL	9	59	456.2419443358612	910.4693357385224	2	456.2418212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RSPPPGMGL_	ENSG00000116560|ENST00000357214|SFPQ;nc|ENSG00000116560|P23246-2|SFPQ	56.72105179125745	0.24094814563026265	4				NaN	NaN	0	NaN	7484	3190	10675
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10677	28.974	NaN	8157.9	30	0	1197.5	0.106	+			23343	KYTEGVQSL	9	68	512.7693996464437	1023.5242463596875	2	512.769287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KYTEGVQSL_	ENSG00000092201|ENST00000216297|SUPT16H;ENST00000537175.1_1_12:16552211-16552709:-|nuORF	91.26522074875469	0.06129826844580791	4				NaN	NaN	0	NaN	7485	3190	10675
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10678	28.976	NaN	4758.4	30	0	682.87	0.106	+			40939	SVFSICHSK	9	70	504.2525336848161	1006.4905144364322	2	504.2522277832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVFSICHSK_	ENSG00000198788|ENST00000675028|MUC2;nc|ENSG00000198788|Q02817|MUC2	49.536043120802724	0.308405419312776	4				NaN	NaN	0	NaN	7486	3190	10675
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10679	28.978	NaN	7233.2	30	0	1281.4	0.106	+			4959	ATQTQFFHVK	10	74	603.8168960590805	1205.6192391849609	2	603.8171997070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATQTQFFHVK_	ENSG00000163564|ENST00000368140|PYHIN1;ENSG00000163565|ENST00000295809|IFI16;ENST00000485134.1_1_1:158911778-158914889:+|nuORF;ENST00000493884.5_1_1:158984458-159022017:+|nuORF;nc|ENSG00000163564|Q6K0P9-2|PYHIN1;nc|ENSG00000163564|Q6K0P9-3|PYHIN1;nc|ENSG00000163564|Q6K0P9-4|PYHIN1;nc|ENSG00000163565|Q16666-2|IFI16;nc|ENSG00000163565|Q16666-3|IFI16;nc|ENSG00000163565|Q16666-6|IFI16;nc|ENSG00000163565|Q16666-8|IFI16	141.88618038797316	0.010251192423762169	4				NaN	NaN	0	NaN	7487	3190	10675
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10680	28.98	NaN	6359.5	30	0	455.54	0.106			+	-1	NFMREMQYSCM	11	74	764.7909545898438	NaN	0	764.7909545898438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C),2 Oxidation (M)	_NFM(Oxidation (M))REM(Oxidation (M))QYSC(Carbamidomethyl (C))M_	REV__ENSG00000205560|ENST00000312108|CPT1B;REV__nc|ENSG00000205560|Q92523-2|CPT1B;REV__nc|ENSG00000205560|Q92523-3|CPT1B;REV__nc|ENSG00000205560|Q92523-4|CPT1B	12.206681093483082	0.456735970842152	4				NaN	NaN	0	NaN	7488	3190	10675
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10681	28.981	NaN	5446	30	0	717.45	0.038			+	-1	FSQKEGCAKCT	11	63	629.783447265625	NaN	0	629.783447265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_FSQKEGCAKC(Carbamidomethyl (C))T_	REV__ENSG00000161010|ENST00000292586|MRNIP;REV__ENST00000519318.5_1_5:179274922-179285796:-|nuORF;REV__ENST00000520150.5_1_5:179267832-179285817:-|nuORF;REV__nc|ENSG00000161010|Q6NTE8-3|MRNIP	36.31764250033197	0.4035636655321173	4				NaN	NaN	0	NaN	7489	3190	10675
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10699	29.017	NaN	11168	30	0	2009.9	0.214	+			14088	GSLFLRTPK	9	73	509.80599586216937	1017.5974387911388	2	509.805908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSLFLRTPK_	ENSG00000134333|ENST00000422447|LDHA;ENST00000437325.2_1_1:235901419-235901638:+|nuORF;ENST00000494573.6_1_11:18418389-18421097:+|nuORF;LDHA|p.E176Kfs*8|1|0.28|ENSG00000134333|chr11:18402943-18402943|G/-|frameshift_variant;LDHA|p.W227Tfs*16|1|0.06|ENSG00000134333|chr11:18403779-18403780|-/AC|frameshift_variant;nc|ENSG00000134333|P00338-2|LDHA;nc|ENSG00000134333|P00338-3|LDHA;nc|ENSG00000134333|P00338-4|LDHA;nc|ENSG00000134333|P00338-5|LDHA	131.115847015877	0.014647977962315902	4				NaN	NaN	0	NaN	7504	3193	10698
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10700	29.021	NaN	8145.1	30	0	1307.7	0.106	+			26462	LTIQSGEQPYK	11	81	632.3328705689592	1262.6511882047182	2	632.33251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LTIQSGEQPYK_	ENSG00000168653|ENST00000372969|NDUFS5	131.08727773389177	0.0012162201639963714	4				NaN	NaN	0	NaN	7505	3193	10698
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10701	29.023	NaN	5144.5	30	0	500.86	0.106				-1	 	0	72	515.3138306417657	1028.6131083503312	2	515.3140258789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7506	3193	10698
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10702	29.025	NaN	3715.5	30	0	663.62	0.106				-1	HELPETFPS	9	48	549.7568791128897	NaN	0	549.7568359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))HELPETFPS_	ENSG00000182168|ENST00000453304|UNC5C;nc|ENSG00000182168|O95185-2|UNC5C;UNC5C|p.P57Q|1|0.19|ENSG00000182168|chr4:95335586-95335586|G/T|missense_variant;UNC5C|p.Q860Rfs*14|1|0.28|ENSG00000182168|chr4:95170206-95170206|G/-|frameshift_variant	21.9598887501803	0.3626577482100488	4				NaN	NaN	0	NaN	7507	3193	10698
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10703	29.027	NaN	3804.9	30	0	724.96	0.038				-1	CCHCCEPTC	9	55	613.6785278320312	NaN	0	613.6785278320312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	4 Carbamidomethyl (C)	_C(Carbamidomethyl (C))C(Carbamidomethyl (C))HC(Carbamidomethyl (C))C(Carbamidomethyl (C))EPTC_	ENSG00000204887|ENST00000377747|KRTAP1-4	7.690282842768113	0.40727630907727536	4				NaN	NaN	0	NaN	7508	3193	10698
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10721	29.063	NaN	10455	30	0	1147.5	0.213	+			41043	SVIDTSTIVRK	11	80	609.8562772880598	1217.6980016429195	2	609.8564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVIDTSTIVRK_	ENSG00000115808|ENST00000263918|STRN;ENST00000495595.1_1_2:37111179-37129881:-|nuORF;nc|ENSG00000115808|O43815-2|STRN;STRN|p.V346*|1|0.24|ENSG00000115808|chr2:36886722-36886722|C/-|frameshift_variant	123.61838826891271	0.013225395544318664	4				NaN	NaN	0	NaN	7523	3196	10720
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10722	29.067	NaN	7958.5	30	0	941.76	0.106	+			49479	VVYSGLENIKK	11	70	625.3612391034331	1248.7079252736662	2	625.3614501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVYSGLENIKK_	ENSG00000153406|ENST00000283429|NMRAL1	85.92353377893507	0.11546253517298165	4				NaN	NaN	0	NaN	7524	3196	10720
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10723	29.069	NaN	7500.3	30	0	832.29	0.106			+	-1	ENMGDAPFQEI	11	75	646.7787010500425	1291.542849166885	2	646.7784423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))ENMGDAPFQEI_	REV__ENST00000376495.4_1_10:23730989-23731082:+|nuORF	29.550750289552195	0.6798279264880025	4				NaN	NaN	0	NaN	7525	3196	10720
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10724	29.071	NaN	3913.2	30	0	910.05	0.106			+	50868	YFAGEKLGTVV	11	56	592.319513011681	1182.624473090162	2	592.319091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YFAGEKLGTVV_	REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-10|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-13|TTN;REV__nc|ENSG00000155657|Q8WZ42-2|TTN;REV__nc|ENSG00000155657|Q8WZ42-3|TTN;REV__nc|ENSG00000155657|Q8WZ42-4|TTN;REV__nc|ENSG00000155657|Q8WZ42-5|TTN;REV__nc|ENSG00000155657|Q8WZ42-7|TTN;REV__nc|ENSG00000155657|Q8WZ42-8|TTN;REV__nc|ENSG00000155657|Q8WZ42-9|TTN;REV__nc|ENSG00000155657|Q8WZ42|TTN;REV__TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;REV__TTN|p.D20259Rfs*40|1|0.44|ENSG00000155657|chr2:178583105-178583106|-/T|frameshift_variant;REV__TTN|p.D21555Ifs*6|1|0.33|ENSG00000155657|chr2:178576659-178576659|G/-|frameshift_variant;REV__TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;REV__TTN|p.E20392Dfs*6|1|0.04|ENSG00000155657|chr2:178582357-178582358|-/TTTAAAATTA|frameshift_variant;REV__TTN|p.E20392Kfs*4|1|0.02|ENSG00000155657|chr2:178582359-178582360|-/TTTT|frameshift_variant;REV__TTN|p.F18705Lfs*8|1|0.37|ENSG00000155657|chr2:178590687-178590687|A/-|frameshift_variant;REV__TTN|p.G19920Afs*12|1|0.42|ENSG00000155657|chr2:178584961-178584961|G/-|frameshift_variant;REV__TTN|p.G22029Efs*22|2|0.13|ENSG00000155657|chr2:178575125-178575125|T/-|frameshift_variant;REV__TTN|p.I24998Nfs*2|1|0.35|ENSG00000155657|chr2:178566216-178566217|-/T|frameshift_variant;REV__TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;REV__TTN|p.K26626Nfs*34|1|0.34|ENSG00000155657|chr2:178561331-178561331|T/-|frameshift_variant;REV__TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;REV__TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;REV__TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant;REV__TTN|p.P22810Hfs*10|1|0.03|ENSG00000155657|chr2:178572780-178572781|-/AAAT|frameshift_variant;REV__TTN|p.V22573Cfs*4|2|0.31|ENSG00000155657|chr2:178573492-178573492|C/-|frameshift_variant;REV__TTN|p.V27442Cfs*4|1|0.05|ENSG00000155657|chr2:178558107-178558108|-/A|frameshift_variant	23.52269567125451	0.7430573033454468	4				NaN	NaN	0	NaN	7526	3196	10720
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10725	29.073	NaN	3081.5	30	0	341.25	0.106				-1	KVYWVEES	8	64	541.265657770165	NaN	0	541.2646484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))KVYWVEES_	ENSG00000241973|ENST00000255882|PI4KA;ENST00000485963.5_1_22:21152870-21213097:-|nuORF;PI4KA|p.E1291Kfs*2|1|0.43|ENSG00000241973|chr22:20734425-20734425|G/-|frameshift_variant;PI4KA|p.H1295Pfs*13|1|0.28|ENSG00000241973|chr22:20734411-20734412|-/G|frameshift_variant;PI4KA|p.H1295Tfs*36|2|0.31|ENSG00000241973|chr22:20734412-20734412|G/-|frameshift_variant;PI4KA|p.R119W|1|0.26|ENSG00000241973|chr22:20834574-20834574|G/A|missense_variant	33.51558372728122	1.7418937515398478	4				NaN	NaN	0	NaN	7527	3196	10720
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10726	29.074	NaN	3203.2	30	0	657.37	0.035	+			7853	DQTPLFYP	8	57	490.74034580836246	NaN	0	490.7403564453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DQTPLFYP_	ENSG00000145495|ENST00000274140|MARCHF6;ENST00000505253.1_1_5:10413496-10422048:+|nuORF;ENST00000514312.1_1_5:10415712-10417549:+|nuORF;nc|ENSG00000145495|O60337-5|MARCHF6;nc|ENSG00000145495|O60337-6|MARCHF6	31.954861631926434	1.7418937515398478	4				NaN	NaN	0	NaN	7528	3196	10720
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10727	29.075	NaN	2966.9	30	0	344.91	0.14	+			48847	VVAYVPEGLL	10	68	530.3092902056293	1058.6040274780585	2	530.3104248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VVAYVPEGLL_	ATP4A|p.E523Sfs*49|1|0.09|ENSG00000105675|chr19:35557782-35557782|G/-|frameshift_variant;ENSG00000105675|ENST00000262623|ATP4A	42.86426827375447	0.522752283233888	4				NaN	NaN	0	NaN	7529	3196	10720
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10745	29.114	NaN	6768.1	30	0	656.73	0.212	+			41229	SVLEVRTENLK	11	70	644.3674226638501	1286.7202923945001	2	644.3672485351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVLEVRTENLK_	ENSG00000162236|ENST00000294179|STX5;nc|ENSG00000162236|Q13190-2|STX5;nc|ENSG00000162236|Q13190-3|STX5;nc|ENSG00000162236|Q13190-4|STX5	125.68205650279488	0.009258456973060042	4				NaN	NaN	0	NaN	7544	3199	10744
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10746	29.117	NaN	4110.8	30	0	402.76	0.106				-1	 	0	100	336.5341068044087	1006.5804910134261	3	336.5342102050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7545	3199	10744
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10747	29.119	NaN	5227.2	30	0	729.6	0.039	+			18583	ISPSFDNIKYD	11	62	649.8182373046875	NaN	0	649.8182373046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ISPSFDNIKYD_	ENSG00000110328|ENST00000227756|GALNT18	29.170058357718403	0.43541742044178583	4				NaN	NaN	0	NaN	7546	3199	10744
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10765	29.156	NaN	34009	30	0	7892.3	0.215	+			1789	AIFGGFKSK	9	91	477.77399811300955	953.5334432928191	2	477.77386474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AIFGGFKSK_	ENSG00000248144|ENST00000515683|ADH1C	104.0567914643314	0.03506238181059741	4				NaN	NaN	0	NaN	7561	3202	10764
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10766	29.159	NaN	5910.3	30	0	635.99	0.106			+	23606	LANSLISNSPI	11	69	564.816850946437	1127.6191489596738	2	564.8170166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LANSLISNSPI_	REV__DBF4|p.Q616Vfs*9|1|0.36|ENSG00000006634|chr7:87907983-87907984|AC/-|frameshift_variant;REV__ENSG00000006634|ENST00000265728|DBF4;REV__nc|ENSG00000006634|Q9UBU7-2|DBF4	58.2462437865262	0.33910980880557884	4				NaN	NaN	0	NaN	7562	3202	10764
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10767	29.162	NaN	7442.5	30	0	1087.7	0.106	+			5432	ATYPDVNNSIK	11	68	611.3088796595234	1220.6032063858468	2	611.30908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATYPDVNNSIK_	ENSG00000122958|ENST00000263559|VPS26A;nc|ENSG00000122958|O75436-2|VPS26A	42.33807565288922	0.5259510355945483	4				NaN	NaN	0	NaN	7563	3202	10764
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10768	29.163	NaN	2835.4	30	0	648.49	0.106	+			43999	TPHVAPVM	8	59	426.22542946186365	850.4363059905273	2	426.2255554199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TPHVAPVM_	ENSG00000197121|ENST00000354764|PGAP1;nc|ENSG00000197121|Q75T13-2|PGAP1;nc|ENSG00000197121|Q75T13-3|PGAP1;PGAP1|p.K353Sfs*13|1|0.37|ENSG00000197121|chr2:196892376-196892377|TT/-|frameshift_variant;PGAP1|p.K723Yfs*11|1|0.11|ENSG00000197121|chr2:196846002-196846003|-/CTATGTGTTTAAGGTAT|frameshift_variant	37.028477286268924	0.6747514403204248	4				NaN	NaN	0	NaN	7564	3202	10764
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10769	29.165	NaN	4548.3	30	0	903.24	0.106	+			27921	MVADTFGILL	10	65	540.2956430327961	1078.576733132392	2	540.2959594726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MVADTFGILL_	ENSG00000112365|ENST00000230122|ZBTB24;nc|ENSG00000112365|O43167-2|ZBTB24;ZBTB24|p.D236Mfs*74|2|0.09|ENSG00000112365|chr6:109481322-109481322|T/-|frameshift_variant;ZBTB24|p.Q553Sfs*10|1|0.12|ENSG00000112365|chr6:109466288-109466289|-/A|frameshift_variant;ZBTB24|p.V168Sfs*19|1|0.27|ENSG00000112365|chr6:109481526-109481526|T/-|frameshift_variant	35.61828744233558	0.588957954432594	4				NaN	NaN	0	NaN	7565	3202	10764
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10770	29.167	NaN	3098.1	30	0	296.53	0.106			+	10440	EVLGSLLSSR	10	67	530.8036499023438	NaN	0	530.8036499023438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EVLGSLLSSR_	REV__ENST00000272133.3_1_1:224804098-224804761:+|nuORF	40.77816245573522	0.36390427802201647	4				NaN	NaN	0	NaN	7566	3202	10764
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10771	29.169	NaN	3718	30	0	510.96	0.036	+			2051	ALAAAGYDVEK	11	65	554.2873135320729	NaN	0	554.2879638671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ALAAAGYDVEK_	ENSG00000124575|ENST00000244534|H1-3;ENSG00000124610|ENST00000244573|H1-1;ENSG00000168298|ENST00000304218|H1-4;ENSG00000187475|ENST00000338379|H1-6;ENSG00000187837|ENST00000343677|H1-2	46.45678178249821	0.34076744753725324	4				NaN	NaN	0	NaN	7567	3202	10764
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10789	29.205	NaN	6985.7	30	0	1761.5	0.214			+	46623	VGAATHPL	8	57	383.21628117552694	764.4180094178539	2	383.2164306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VGAATHPL_	REV__ENST00000204005.13_1_19:41129584-41129844:+|nuORF;REV__ENST00000598178.1_1_19:41129590-41129683:+|nuORF	46.76643321282427	0.6143254112625767	4				NaN	NaN	0	NaN	7582	3205	10788
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10790	29.209	NaN	7614.6	30	0	615.82	0.106	+			28367	NEKVIEHIM	9	70	556.791843614814	1111.5691342964278	2	556.7928466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NEKVIEHIM_	ENSG00000163220|ENST00000368738|S100A9	89.02883481214508	0.06760336634167786	4				NaN	NaN	0	NaN	7583	3205	10788
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10791	29.211	NaN	4971	30	0	614.32	0.106				-1	PPESDRNF	8	66	502.22768946964067	1002.4408260060814	2	502.22747802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))PPESDRNF_	ENSG00000164880|ENST00000404767|INTS1;INTS1|p.R641H|1|0.17|ENSG00000164880|chr7:1493900-1493900|C/T|missense_variant;INTS1|p.R843Pfs*31|1|0.39|ENSG00000164880|chr7:1487438-1487439|-/G|frameshift_variant	35.61828744233558	0.6843154725607303	4				NaN	NaN	0	NaN	7584	3205	10788
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10792	29.213	NaN	3509.2	30	0	583.38	0.106				-1	LYMCTSEG	8	57	480.69315229269336	959.3717516521867	2	480.69281005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_LYMC(Carbamidomethyl (C))TSEG_	ENST00000503716.5_1_4:151186876-151502511:-|nuORF	44.53106598305862	0.628196326904373	4				NaN	NaN	0	NaN	7585	3205	10788
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10793	29.215	NaN	4086	30	0	699.68	0.106	+			1896	AIMKETRKT	9	68	539.3060912670189	NaN	0	539.3058471679688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AIMKETRKT_	nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN	42.396135135203025	0.2590952873412954	4				NaN	NaN	0	NaN	7586	3205	10788
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10794	29.217	NaN	4701.8	30	0	1212.2	0.037			+	8131	DYVQSGERTV	10	60	577.2754516601562	NaN	0	577.2754516601562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DYVQSGERTV_	REV__ENSG00000168658|ENST00000477737|VWA3B;REV__ENST00000409460.5_1_2:98703705-98907168:+|nuORF;REV__ENST00000432242.5_1_2:98833411-98885811:+|nuORF;REV__ENST00000448638.5_1_2:98797652-98853199:+|nuORF;REV__ENST00000495571.5_1_2:98833411-98928809:+|nuORF;REV__nc|ENSG00000168658|Q502W6-5|VWA3B;REV__nc|ENSG00000168658|Q502W6-6|VWA3B;REV__nc|ENSG00000168658|Q502W6-7|VWA3B;REV__nc|ENSG00000168658|Q502W6-8|VWA3B	35.61828744233558	0.3832230071539346	4				NaN	NaN	0	NaN	7587	3205	10788
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10809	29.246	NaN	35049	30	0	5779.4	0.214	+			42902	TEHINIHQL	9	114	368.8645278724746	1103.5717542176237	3	368.8647155761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEHINIHQL_	ENSG00000180353|ENST00000314583|HCLS1;ENST00000481314.5_1_3:121363541-121379717:-|nuORF;ENST00000487290.5_1_3:121363549-121379717:-|nuORF;nc|ENSG00000180353|P14317-2|HCLS1	96.19043198914106	0.047412499214244314	4				NaN	NaN	0	NaN	7599	3208	10808
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10810	29.25	NaN	9475.3	30	0	2159.8	0.106	+			22391	KTIIFVETK	9	66	539.8292209504208	1077.6438889676415	2	539.8292236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTIIFVETK_	ENSG00000100201|ENST00000403230|DDX17;ENST00000216019.11_1_22:38888049-38902242:-|nuORF;ENST00000432525.5_1_22:38886367-38903636:-|nuORF;ENST00000497196.5_1_22:38889517-38891019:-|nuORF;nc|ENSG00000100201|Q92841-1|DDX17;nc|ENSG00000100201|Q92841-2|DDX17;nc|ENSG00000100201|Q92841-3|DDX17	125.68205650279488	0.017759985800556374	4				NaN	NaN	0	NaN	7600	3208	10808
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10811	29.252	NaN	4758	30	0	474.22	0.106	+			42890	TEHEAPVSL	9	74	491.7461413320334	981.4777297308668	2	491.7454528808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TEHEAPVSL_	ENSG00000181284|ENST00000323206|TMEM102	53.351449002276354	0.2690372970092375	4				NaN	NaN	0	NaN	7601	3208	10808
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10812	29.254	NaN	5448.8	30	0	807.23	0.106	+			14594	GTGALILQK	9	64	450.77914354463604	899.5437341560721	2	450.779052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTGALILQK_	ENSG00000149418|ENST00000278742|ST14	93.19546047674547	0.05585629608842056	4				NaN	NaN	0	NaN	7602	3208	10808
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10813	29.256	NaN	4612.4	30	0	729.27	0.036	+			23112	KVVNLPFEK	9	70	537.3213049042101	1072.6280568752202	2	537.3218383789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KVVNLPFEK_	ENST00000604687.1_1_21:10475839-10476034:-|nuORF	61.76455937419982	0.19890525308472518	4				NaN	NaN	0	NaN	7603	3208	10808
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10831	29.292	NaN	16885	30	0	1496	0.214	+			49663	VYISEHEHF	9	75	580.7725409817297	1159.5305290302592	2	580.7722778320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYISEHEHF_	ENSG00000104853|ENST00000337392|CLPTM1;nc|ENSG00000104853|O96005-3|CLPTM1;nc|ENSG00000104853|O96005-4|CLPTM1	180.92599232761785	0.0012030822705978085	4				NaN	NaN	0	NaN	7618	3211	10830
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10832	29.296	NaN	4059	30	0	546.77	0.106			+	18431	ISCTSRESD	9	73	527.7274664927307	1053.4403800522614	2	527.7276000976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_ISC(Carbamidomethyl (C))TSRESD_	REV__ENSG00000172059|ENST00000305883|KLF11;REV__nc|ENSG00000172059|O14901-2|KLF11	56.72105179125745	0.24094814563026265	4				NaN	NaN	0	NaN	7619	3211	10830
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10833	29.298	NaN	5235.1	30	0	970.77	0.039				-1	ETLCSMKKRK	10	61	640.8455200195312	NaN	0	640.8455200195312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_ETLC(Carbamidomethyl (C))SMKKRK_	ENSG00000184949|ENST00000535113|FAM227A;ENST00000540952.5_1_22:38982050-39003412:-|nuORF;nc|ENSG00000184949|F5H4B4-2|FAM227A	19.996771675451527	0.4201028297492154	4				NaN	NaN	0	NaN	7620	3211	10830
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10848	29.329	NaN	8158.2	30	0	1015	0.214	+			20019	KEILGTAQSV	10	68	523.2982650277096	1044.581977122219	2	523.2980346679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEILGTAQSV_	ENSG00000197958|ENST00000361436|RPL12;ENST00000460355.1_1_2:204055847-204055997:+|nuORF;nc|ENSG00000197958|P30050-2|RPL12	150.15188659993407	0.008468567113416427	4				NaN	NaN	0	NaN	7632	3214	10847
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10849	29.332	NaN	2787.6	30	0	427.77	0.106	+			34085	RSPPPGMGL	9	51	456.2419443358612	910.4693357385224	2	456.2416687011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RSPPPGMGL_	ENSG00000116560|ENST00000357214|SFPQ;nc|ENSG00000116560|P23246-2|SFPQ	31.529811441608018	0.5085848003137583	4				NaN	NaN	0	NaN	7633	3214	10847
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10850	29.334	NaN	4366.3	30	0	535.09	0.106	+			27933	MVELHNLYR	9	66	587.8068237304688	NaN	0	587.8068237304688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MVELHNLYR_	ENSG00000164530|ENST00000373674|PI16;nc|ENSG00000164530|Q6UXB8-2|PI16	29.14955571784316	0.3303970763161698	4				NaN	NaN	0	NaN	7634	3214	10847
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10851	29.336	NaN	1968.6	30	0	214.1	0.106			+	42436	TALLAAKATL	10	64	486.8082463082281	971.6019396832562	2	486.80804443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TALLAAKATL_	REV__tr|U7T3L5|U7T3L5_FUSNUMethioninesynthaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00451PE=3SV=1	32.81241826257853	0.6118718159329168	4				NaN	NaN	0	NaN	7635	3214	10847
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10852	29.338	NaN	5837.2	30	0	882.71	0.106				-1	VYSCDQERQ	9	64	592.7517498040852	1183.4889466749703	2	593.2532348632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_VYSC(Carbamidomethyl (C))DQERQ_	ENSG00000198732|ENST00000361956|SMOC1;nc|ENSG00000198732|Q9H4F8|SMOC1	44.377184641726394	0.36891676396732553	4				NaN	NaN	0	NaN	7636	3214	10847
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10853	29.34	NaN	4294.8	30	0	623.97	0.038			+	17532	IDPLLTRELGL	11	60	620.3692096793887	NaN	0	620.3701171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IDPLLTRELGL_	REV__ENSG00000178026|ENST00000318753|LRRC75B;REV__ENST00000464490.1_1_22:24985500-24985914:-|nuORF	21.780426970141523	0.456735970842152	4				NaN	NaN	0	NaN	7637	3214	10847
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10871	29.377	NaN	5461.7	30	0	1117.7	0.214	+			14089	GSLFLRTPK	9	52	509.80599586216937	1017.5974387911388	2	509.8056335449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSLFLRTPK_	ENSG00000134333|ENST00000422447|LDHA;ENST00000437325.2_1_1:235901419-235901638:+|nuORF;ENST00000494573.6_1_11:18418389-18421097:+|nuORF;LDHA|p.E176Kfs*8|1|0.28|ENSG00000134333|chr11:18402943-18402943|G/-|frameshift_variant;LDHA|p.W227Tfs*16|1|0.06|ENSG00000134333|chr11:18403779-18403780|-/AC|frameshift_variant;nc|ENSG00000134333|P00338-2|LDHA;nc|ENSG00000134333|P00338-3|LDHA;nc|ENSG00000134333|P00338-4|LDHA;nc|ENSG00000134333|P00338-5|LDHA	68.62578634547417	0.14673074753754126	4				NaN	NaN	0	NaN	7652	3217	10870
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10872	29.38	NaN	3906.9	30	0	521.19	0.106	+			26898	LWVFLGATRC	10	71	583.3142792393935	NaN	0	583.3140258789062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LWVFLGATRC_	ENST00000545132.5_1_1:53236700-53236742:+|nuORF	39.252832667884924	0.37128895876774715	4				NaN	NaN	0	NaN	7653	3217	10870
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10873	29.382	NaN	2946.3	30	0	404.75	0.106			+	27812	MSKGKVLGFQ	10	68	547.8043455469805	NaN	0	547.8040771484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MSKGKVLGFQ_	REV__ARFGEF2-SULF2|1|fusion;REV__ARFGEF2-SULF2|2|fusion;REV__ENSG00000137573|ENST00000402687|SULF1;REV__ENSG00000196562|ENST00000688720|SULF2;REV__ENST00000521946.5_1_8:70505207-70554528:+|nuORF;REV__nc|ENSG00000196562|Q8IWU5-2|SULF2;REV__SULF1|p.F343Lfs*7|2|0.2|ENSG00000137573|chr8:69601791-69601791|T/-|frameshift_variant	39.252832667884924	0.37128895876774715	4				NaN	NaN	0	NaN	7654	3217	10870
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10874	29.384	NaN	4838.9	30	0	964.09	0.106	+			21119	KKSCQLCTEDK	11	63	641.808770294921	1281.602987656642	2	641.8084716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KKSCQLCTEDK_	ENSG00000251154|ENST00000509356|PTTG1IP2	25.125986553469783	0.7262400895305658	4				NaN	NaN	0	NaN	7655	3217	10870
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10875	29.386	NaN	5333.3	30	0	488.59	0.036	+			26297	LSVDVGGAKRL	11	64	557.8335383185225	1113.652523703845	2	557.833740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSVDVGGAKRL_	ENSG00000145740|ENST00000396591|SLC30A5;ENST00000507354.5_1_5:68398890-68419336:+|nuORF;nc|ENSG00000145740|Q8TAD4-2|SLC30A5	45.908116695636124	0.4771019740774998	4				NaN	NaN	0	NaN	7656	3217	10870
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10893	29.422	NaN	8226.3	30	0	1841.9	0.215				-1	 	0	66	495.74851537761623	989.4824778220325	2	495.7481689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7671	3220	10892
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10894	29.425	NaN	20355	30	0	3263.3	0.106	+			36910	SIIETLRQK	9	87	544.3273475922263	1086.6401422512524	2	544.3274536132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SIIETLRQK_	ENSG00000080824|ENST00000216281|HSP90AA1;ENST00000436135.1_1_1:158495283-158495625:+|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1	118.74307786436346	0.02196067127630568	4				NaN	NaN	0	NaN	7672	3220	10892
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10895	29.428	NaN	13717	30	0	2922.7	0.106	+			14788	GTLASSFAR	9	68	455.24318893426096	908.4718249353219	2	455.24298095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTLASSFAR_	ENST00000563117.5_1_16:20817227-20817782:-|nuORF;ENST00000565884.5_1_16:20817227-20817407:-|nuORF	158.07458414430337	0.004987072822166904	4				NaN	NaN	0	NaN	7673	3220	10892
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10896	29.429	NaN	2942.1	30	0	364.55	0.106				-1	ALIDIFCK	8	55	490.26731141779766	NaN	0	490.2671813964844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_ALIDIFC(Carbamidomethyl (C))K_	ENSG00000173769|ENST00000309765|TOPAZ1	28.2542754592877	1.7418937515398478	4				NaN	NaN	0	NaN	7674	3220	10892
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10897	29.431	NaN	4563.9	30	0	436.27	0.106	+			36141	SEKSLENETL	10	68	575.2863892210808	1148.5582255089614	2	575.2868041992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SEKSLENETL_	ENSG00000063046|ENST00000262056|EIF4B;nc|ENSG00000063046|P23588-2|EIF4B	66.9202029811203	0.3029018092171124	4				NaN	NaN	0	NaN	7675	3220	10892
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10898	29.433	NaN	6630.6	30	0	934.07	0.039			+	-1	CRLHIMHMPL	10	65	662.32861328125	NaN	0	662.32861328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),Oxidation (M)	_C(Carbamidomethyl (C))RLHIM(Oxidation (M))HMPL_	REV__BAZ1A|p.S944Qfs*34|1|0.38|ENSG00000198604|chr14:34775922-34775922|A/-|frameshift_variant	23.04248740728303	0.42010282974921537	4				NaN	NaN	0	NaN	7676	3220	10892
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10899	29.434	NaN	4284.8	30	0	642.73	0.143			+	27296	MGRERAGGNF	10	70	547.7603071996011	1093.5060614660022	2	547.7597045898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MGRERAGGNF_	REV__ENST00000421161.1_1_6:159528830-159529112:+|nuORF	31.529811441608018	0.6223461015008678	4				NaN	NaN	0	NaN	7677	3220	10892
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10914	29.467	NaN	7752.9	30	0	1242.6	0.214	+			46590	VFQAPAPD	8	77	422.71340491237163	843.4122568915433	2	422.71356201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VFQAPAPD_	ENSG00000105429|ENST00000251268|MEGF8;MEGF8|p.D1331Tfs*8|1|0.35|ENSG00000105429|chr19:42353999-42353999|C/-|frameshift_variant;MEGF8|p.G1586Dfs*144|1|0.39|ENSG00000105429|chr19:42356903-42356903|G/-|frameshift_variant;MEGF8|p.G1861Efs*10|1|0.13|ENSG00000105429|chr19:42360864-42360864|G/-|frameshift_variant;MEGF8|p.G2143Afs*20|2|0.22|ENSG00000105429|chr19:42368603-42368603|G/-|frameshift_variant;MEGF8|p.R1953Pfs*3|1|0.19|ENSG00000105429|chr19:42362390-42362391|-/C|frameshift_variant;MEGF8|p.T1670Qfs*60|3|0.4|ENSG00000105429|chr19:42357575-42357575|C/-|frameshift_variant;nc|ENSG00000105429|Q7Z7M0-2|MEGF8	60.29395666154354	0.49887135096048313	4				NaN	NaN	0	NaN	7689	3223	10913
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10915	29.47	NaN	5727.5	30	0	1361.8	0.106	+			45288	TVRFNVLK	8	81	326.2026048335978	975.5859851009934	3	326.2027282714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVRFNVLK_	ENSG00000142534|ENST00000270625|RPS11	42.396135135203025	0.6414440140393314	4				NaN	NaN	0	NaN	7690	3223	10913
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10916	29.472	NaN	8402.8	30	0	615.07	0.106			+	13408	GLFPTSGLAGP	11	75	508.77496283113766	1015.5353727290753	2	509.2729187011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GLFPTSGLAGP_	REV__ENSG00000198492|ENST00000373812|YTHDF2;REV__nc|ENSG00000198492|Q9Y5A9-2|YTHDF2;REV__YTHDF2|p.F459Sfs*15|1|0.27|ENSG00000198492|chr1:28743643-28743643|T/-|frameshift_variant;REV__YTHDF2|p.N136Kfs*2|1|0.37|ENSG00000198492|chr1:28742670-28742671|-/G|frameshift_variant;REV__YTHDF2|p.P268Rfs*2|1|0.14|ENSG00000198492|chr1:28743069-28743069|C/-|frameshift_variant	45.97224482568171	0.4762245054624163	4				NaN	NaN	0	NaN	7691	3223	10913
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10917	29.474	NaN	5667.1	30	0	760.35	0.106	+			7106	CYLSCVQVF	9	69	531.2430162853924	1060.4714796375847	2	531.2438354492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_CYLSCVQVF_	L1PA5_dup2765|chr4:69723015-69726028:+|1.903650506224423|0.171219590839865|3.47|472.0|87|1|anti-sense	60.97194046774394	0.20551255781574032	4				NaN	NaN	0	NaN	7692	3223	10913
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10918	29.476	NaN	4537.8	30	0	471.12	0.106	+			696	AEALTQRL	8	55	451.2588328679309	900.5031128026618	2	451.2589416503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEALTQRL_	ENSG00000105357|ENST00000642316|MYH14;MYH14|p.L1950Sfs*14|1|0.34|ENSG00000105357|chr19:50309646-50309646|C/-|frameshift_variant;MYH14|p.R1457Q|1|0.72|ENSG00000105357|chr19:50281796-50281796|G/A|missense_variant;nc|ENSG00000105357|Q7Z406-5|MYH14;nc|ENSG00000105357|Q7Z406-6|MYH14;nc|ENSG00000105357|Q7Z406|MYH14	77.31757898189308	0.345924878368729	4				NaN	NaN	0	NaN	7693	3223	10913
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10919	29.478	NaN	5455.2	30	0	596.84	0.034				-1	 	0	76	476.2491441365189	475.2418676699189	1	476.2499694824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7694	3223	10913
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10920	29.478	NaN	4690.2	30	0	1167.1	0.143				-1	 	0	70	336.5341068044087	1006.5804910134261	3	336.53436279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7695	3223	10913
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10938	29.516	NaN	9367.3	30	0	1077.6	0.214	+			3826	ATAIGMPVEK	10	73	508.77496283113766	1015.5353727290753	2	508.77581787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATAIGMPVEK_	ENSG00000109736|ENST00000355443|MFSD10;ENST00000509676.1_1_4:2934766-2935650:-|nuORF;MFSD10|p.S111Gfs*48|1|0.44|ENSG00000109736|chr4:2933125-2933147|GGGCGCCTCCCCAAGCAGTCAGA/-|frameshift_variant	72.2432373244024	0.2589930451692646	4				NaN	NaN	0	NaN	7710	3226	10937
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10939	29.519	NaN	9202.9	30	0	1334.9	0.106			+	8838	EELRPGLER	9	93	366.8696016122308	NaN	0	366.8695373535156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EELRPGLER_	REV__ENSG00000107816|ENST00000454422|LZTS2	32.81241826257853	0.3119040447479903	4				NaN	NaN	0	NaN	7711	3226	10937
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10940	29.521	NaN	8811.3	30	0	4146.7	0.106	+			15607	GVIVHIIEK	9	71	336.5461708473013	1006.616683142104	3	336.54644775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GVIVHIIEK_	ENSG00000277791|ENST00000619426|PSMB3	25.450171626174864	0.5654022654467333	4				NaN	NaN	0	NaN	7712	3226	10937
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10941	29.523	NaN	7842	30	0	2675.2	0.106				-1	 	0	56	465.2481363284606	928.4817197237212	2	465.2475280761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7713	3226	10937
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10942	29.525	NaN	4205.9	30	0	647.25	0.106	+			26846	LVVLYQNAK	9	81	349.8778820042136	1046.6118166128408	3	349.8780822753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LVVLYQNAK_	ENSG00000175283|ENST00000372586|DOLK	50.0245360154114	0.3026755932229825	4				NaN	NaN	0	NaN	7714	3226	10937
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10943	29.527	NaN	6692.7	30	0	750.4	0.035	+			15608	GVIVHIIEK	9	70	504.31618257890625	1006.6178122246125	2	504.31597900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GVIVHIIEK_	ENSG00000277791|ENST00000619426|PSMB3	77.31757898189308	0.1091473830098891	4				NaN	NaN	0	NaN	7715	3226	10937
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10944	29.527	NaN	3414.1	30	0	261.97	0.138			+	26759	LVPPLANK	8	73	426.2708297168941	850.5271065005883	2	426.2710266113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LVPPLANK_	REV__ENSG00000155506|ENST00000518297|LARP1;REV__LARP1|p.D583Tfs*12|1|0.38|ENSG00000155506|chr5:154802262-154802262|G/-|frameshift_variant	37.028477286268924	0.6747514403204248	4				NaN	NaN	0	NaN	7716	3226	10937
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10959	29.559	NaN	9739.7	30	0	2079.8	0.214	+			12749	GELASYGEIT	10	69	520.2486830517933	1038.4828131703864	2	520.2472534179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GELASYGEIT_	ENSG00000198589|ENST00000651943|LRBA;LRBA|p.L2590*|1|0.41|ENSG00000198589|chr4:150310342-150310342|A/-|frameshift_variant;LRBA|p.T2011Qfs*11|1|0.19|ENSG00000198589|chr4:150599022-150599022|T/-|frameshift_variant;nc|ENSG00000198589|P50851-2|LRBA;nc|ENSG00000198589|P50851|LRBA	51.33545320467046	0.4446945571623749	4				NaN	NaN	0	NaN	7728	3229	10958
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10960	29.563	NaN	10535	30	0	1308	0.106	+			38580	SSFSGLLRK	9	70	497.7877888901617	993.5610248471235	2	497.7874450683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSFSGLLRK_	ENSG00000162783|ENST00000367577|IER5	107.00750918261382	0.032051501805654005	4				NaN	NaN	0	NaN	7729	3229	10958
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10961	29.565	NaN	7387.8	30	0	1101.9	0.106	+			11332	FLDEKTHEL	9	78	566.2877230421376	1130.560893151075	2	566.2872924804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FLDEKTHEL_	ENSG00000129317|ENST00000344862|PUS7L;PUS7L|p.K220*|1|0.31|ENSG00000129317|chr12:43754588-43754589|-/A|frameshift_variant	65.46538089061403	0.16805504838372562	4				NaN	NaN	0	NaN	7730	3229	10958
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10962	29.566	NaN	5562.2	30	0	671.45	0.106	+			16997	HPSLQPEEY	9	59	550.2564022318528	1098.4982515305055	2	550.2568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HPSLQPEEY_	ENSG00000135506|ENST00000315970|OS9;ENST00000549307.5_1_12:58089922-58109758:+|nuORF;ENST00000552787.5_1_12:58089581-58109758:+|nuORF;nc|ENSG00000135506|Q13438-2|OS9;nc|ENSG00000135506|Q13438-3|OS9;nc|ENSG00000135506|Q13438-4|OS9;nc|ENSG00000135506|Q13438-5|OS9;nc|ENSG00000135506|Q13438-6|OS9;nc|ENSG00000135506|Q13438-7|OS9;nc|ENSG00000135506|Q13438-8|OS9	36.446750945000026	0.4619375763483977	4				NaN	NaN	0	NaN	7731	3229	10958
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10963	29.568	NaN	4414.3	30	0	467.73	0.106	+			42778	TEAETIQKL	9	61	516.7822038671464	1031.5498548010928	2	516.7818603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TEAETIQKL_	ENSG00000138768|ENST00000514213|USO1;nc|ENSG00000138768|O60763-2|USO1;USO1|p.I920Sfs*9|1|0.08|ENSG00000138768|chr4:75812332-75812333|-/GAGCTTT|frameshift_variant;USO1|p.K251*|2|0.26|ENSG00000138768|chr4:75782746-75782747|-/T|frameshift_variant;USO1|p.K919Tfs*8|1|0.08|ENSG00000138768|chr4:75812331-75812332|-/C|frameshift_variant	65.46538089061403	0.16805504838372562	4				NaN	NaN	0	NaN	7732	3229	10958
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10964	29.57	NaN	4569.5	30	0	654.87	0.106			+	19636	KDKETIAKL	9	65	523.3161724792632	1044.6177920253263	2	523.31640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KDKETIAKL_	REV__SCG3|p.E85D|1|0.19|ENSG00000104112|chr15:51683292-51683292|A/C|missense_variant	62.107414245175825	0.1960472003779324	4				NaN	NaN	0	NaN	7733	3229	10958
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10965	29.572	NaN	3743.3	30	0	597.13	0.035				-1	YVNGNMENA	9	52	514.2117489499849	NaN	0	514.2098999023438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_YVNGNM(Oxidation (M))ENA_	ENSG00000196549|ENST00000360490|MME	27.882242232435846	0.3367954786602879	4				NaN	NaN	0	NaN	7734	3229	10958
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10983	29.609	NaN	4001.1	30	0	289.47	0.214			+	10598	EYLEYTLL	8	84	348.5136240097657	1042.519042629497	3	348.5135498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EYLEYTLL_	REV__ARHGAP31|p.A1199Rfs*106|1|0.34|ENSG00000031081|chr3:119415522-119415522|G/-|frameshift_variant;REV__ENSG00000031081|ENST00000264245|ARHGAP31	31.954861631926434	0.7126016770032289	4				NaN	NaN	0	NaN	7749	3232	10982
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10984	29.613	NaN	5736.7	30	0	924.26	0.106			+	7990	DTAALVKQL	9	66	479.7814395017238	957.5483260702476	2	479.7818908691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DTAALVKQL_	REV__ENSG00000163161|ENST00000285398|ERCC3;REV__ENST00000426778.5_1_2:128015174-128051559:-|nuORF;REV__ENST00000491292.5_1_2:128015174-128017132:-|nuORF	74.25504064058377	0.12238981753128622	4				NaN	NaN	0	NaN	7750	3232	10982
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10985	29.615	NaN	3671.3	30	0	450.29	0.106	+			41059	SVIGPQQQFL	10	65	558.8035648640703	1115.5925767949404	2	558.8023681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVIGPQQQFL_	ENSG00000081377|ENST00000375241|CDC14B;nc|ENSG00000081377|O60729-2|CDC14B;nc|ENSG00000081377|O60729-3|CDC14B;nc|ENSG00000081377|O60729-4|CDC14B;nc|ENSG00000081377|O60729-5|CDC14B	30.317721548370564	0.6322445173429027	4				NaN	NaN	0	NaN	7751	3232	10982
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10986	29.617	NaN	3634.3	30	0	528.83	0.106	+			47464	VPVYPPHSEN	10	57	569.7817981241524	1137.5490433151047	2	570.2833251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VPVYPPHSEN_	ENSG00000056586|ENST00000357244|RC3H2;nc|ENSG00000056586|Q9HBD1-4|RC3H2;nc|ENSG00000056586|Q9HBD1-6|RC3H2;RC3H2|p.T1132Qfs*5|1|0.29|ENSG00000056586|chr9:122849809-122849809|T/-|frameshift_variant	27.882242232435846	0.6521336255503853	4				NaN	NaN	0	NaN	7752	3232	10982
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10987	29.619	NaN	4917.9	30	0	797.58	0.106	+			32662	RAAQRTVTRGK	11	58	622.3718872070312	NaN	0	622.3718872070312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RAAQRTVTRGK_	PHF21A|p.P652Lfs*104|4|0.42|ENSG00000135365|chr11:45934056-45934056|G/-|frameshift_variant	28.383774762235813	0.43892155336841665	4				NaN	NaN	0	NaN	7753	3232	10982
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10988	29.62	NaN	3380.2	30	0	369.17	0.036	+			10947	FDTVRRYL	8	67	535.2931562293675	1068.5717595255348	2	535.7815551757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FDTVRRYL_	tr|U7T6E8|U7T6E8_FUSNUCysteine--tRNAligaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=cysSPE=3SV=1	31.529811441608018	0.715883593221515	4				NaN	NaN	0	NaN	7754	3232	10982
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	10989	29.621	NaN	3228.1	30	0	583.25	0.141			+	27483	MLVIMLGTTT	10	61	540.2974853515625	NaN	0	540.2974853515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MLVIMLGTTT_	REV__ENSG00000114770|ENST00000334444|ABCC5;REV__ENST00000437205.5_1_3:183639090-183689734:-|nuORF;REV__nc|ENSG00000114770|O15440-5|ABCC5	32.81241826257853	0.3924360933802784	4				NaN	NaN	0	NaN	7755	3232	10982
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11007	29.66	NaN	47008	30	0	4675.3	0.213	+			21274	KLNTDLYHTK	10	101	616.8352869890962	1231.6560210449923	2	616.8353881835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KLNTDLYHTK_	ENSG00000153684|ENST00000526619|GOLGA8F;ENSG00000183629|ENST00000525590|GOLGA8G;ENSG00000261739|ENST00000562295|GOLGA8S;nc|ENSG00000181984|A6NN73|GOLGA8CP	75.04331003522576	0.23611669241777622	4				NaN	NaN	0	NaN	7770	3235	11006
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11008	29.664	NaN	19759	30	0	1768.6	0.106	+			39729	STISIFHCK	9	90	546.7789325343159	1091.5433121354317	2	546.7789916992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_STISIFHC(Carbamidomethyl (C))K_	ENST00000554584.5_1_14:64375879-64407376:+|nuORF	153.03582135801034	0.006161527642367307	4				NaN	NaN	0	NaN	7771	3235	11006
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11009	29.666	NaN	5407.7	30	0	2338	0.106	+			2444	APHSCDAL	8	46	407.18192079294096	812.3492886526819	2	407.1819152832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_APHSCDAL_	MROH2B|p.T942A|1|0.2|ENSG00000171495|chr5:41017910-41017910|T/C|missense_variant	46.76643321282427	0.6143254112625767	4				NaN	NaN	0	NaN	7772	3235	11006
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11010	29.668	NaN	7072.3	30	0	913.67	0.106	+			49664	VYISEHEHF	9	67	580.7725409817297	1159.5305290302592	2	580.7725219726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VYISEHEHF_	ENSG00000104853|ENST00000337392|CLPTM1;nc|ENSG00000104853|O96005-3|CLPTM1;nc|ENSG00000104853|O96005-4|CLPTM1	90.36981228632155	0.0638227155548745	4				NaN	NaN	0	NaN	7773	3235	11006
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11011	29.669	NaN	3263.9	30	0	549.56	0.106			+	17450	ICANDVTNALI	11	63	573.7951682028871	1145.5757834725741	2	573.7950439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ICANDVTNALI_	REV__CON__H-INV:HIT000015463	47.657333605630114	0.4531673460382624	4				NaN	NaN	0	NaN	7774	3235	11006
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11012	29.671	NaN	3074.2	30	0	341.65	0.036			+	-1	ELQKYLMM	8	66	544.2602947857107	NaN	0	543.81103515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Oxidation (M)	_ELQKYLM(Oxidation (M))M(Oxidation (M))_	REV__ENSG00000214367|ENST00000443786|HAUS3;REV__HAUS3|p.F576Ifs*5|1|0.3|ENSG00000214367|chr4:2232013-2232014|-/T|frameshift_variant;REV__nc|ENSG00000214367|Q68CZ6-2|HAUS3	38.80614096846853	1.7418937515398478	4				NaN	NaN	0	NaN	7775	3235	11006
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11013	29.672	NaN	5351	30	0	808.94	0.144			+	20547	KFNGTKHTLDE	11	78	645.3274627456562	1288.6403725581124	2	645.3267822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KFNGTKHTLDE_	REV__CCDC61|p.R103Pfs*27|1|0.29|ENSG00000104983|chr19:46006626-46006627|-/G|frameshift_variant;REV__CCDC61|p.S447Afs*10|1|0.08|ENSG00000104983|chr19:46017272-46017272|C/-|frameshift_variant;REV__ENSG00000104983|ENST00000595358|CCDC61;REV__nc|ENSG00000104983|Q9Y6R9-2|CCDC61	56.43379154798735	0.3552884390983883	4				NaN	NaN	0	NaN	7776	3235	11006
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11031	29.71	NaN	66061	30	0	11387	0.214	+			14847	GTLMWHQMK	9	94	566.2753268994982	1130.5361008657962	2	566.2756958007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTLMWHQMK_	ENST00000346169.6_1_3:184032401-184033585:+|nuORF;ENST00000352767.7_2_3:184032446-184033585:+|nuORF	191.6257511998002	0.00012895968667509943	4				NaN	NaN	0	NaN	7791	3238	11030
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11032	29.714	NaN	18805	30	0	11701	0.106	+			30890	QEKKVVVYL	9	69	553.3348134677724	1104.6550740023447	2	553.3346557617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QEKKVVVYL_	CTSC|p.F302Lfs*27|1|0.1|ENSG00000109861|chr11:88294495-88294496|-/A|frameshift_variant;CTSC|p.N427Kfs*9|1|0.09|ENSG00000109861|chr11:88294117-88294118|-/T|frameshift_variant;CTSC|p.V126Gfs*3|1|0.2|ENSG00000109861|chr11:88312496-88312497|-/C|frameshift_variant;ENSG00000109861|ENST00000227266|CTSC;ENST00000393301.4_1_11:88059607-88070840:-|nuORF;ENST00000534131.1_1_11:88068041-88070840:-|nuORF;nc|ENSG00000109861|P53634-2|CTSC;nc|ENSG00000109861|P53634-3|CTSC	90.77665401227738	0.06267569666681755	4				NaN	NaN	0	NaN	7792	3238	11030
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11033	29.716	NaN	6672.5	30	0	1364.1	0.106				-1	 	0	83	343.21681076459066	684.4190685959813	2	343.217041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7793	3238	11030
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11034	29.717	NaN	2584.9	30	0	675.29	0.106				-1	 	0	54	419.15295286548206	418.1456763988821	1	419.1521301269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7794	3238	11030
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11035	29.719	NaN	6893.2	30	0	647.29	0.106				-1	WMIAALNSL	9	73	517.7721288466241	1033.5297047600482	2	517.7646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_WM(Oxidation (M))IAALNSL_	ENSG00000185385|ENST00000641113|OR7A17	53.351449002276354	0.2690372970092375	4				NaN	NaN	0	NaN	7795	3238	11030
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11036	29.721	NaN	10508	30	0	1842.4	0.038				-1	HALRCRCRAG	10	69	628.814453125	NaN	0	628.814453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Carbamidomethyl (C)	_HALRC(Carbamidomethyl (C))RC(Carbamidomethyl (C))RAG_	ENSG00000090932|ENST00000356433|DLL3;nc|ENSG00000090932|Q9NYJ7|DLL3	19.996771675451527	0.4201028297492154	4				NaN	NaN	0	NaN	7796	3238	11030
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11037	29.722	NaN	5629.2	30	0	912.46	0.144	+			29284	NYIHGSSQAQF	11	74	626.2911289634426	1250.567704993685	2	626.2913208007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NYIHGSSQAQF_	ENSG00000102158|ENST00000618282|MAGT1	29.550750289552195	0.6798279264880025	4				NaN	NaN	0	NaN	7797	3238	11030
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11055	29.76	NaN	4790.6	30	0	485.91	0.214			+	8883	EESRTILV	8	68	473.7638845808915	945.513216228583	2	473.7637634277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EESRTILV_	REV__tr|U7T4G6|U7T4G6_FUSNURfaE,domainIOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00333PE=4SV=1	37.15910966729921	0.6739408393984688	4				NaN	NaN	0	NaN	7812	3241	11054
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11056	29.764	NaN	3474.6	30	0	478.27	0.106	+			44111	TPVKDLVKY	9	60	531.8133564513263	1061.6121599694525	2	531.8138427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TPVKDLVKY_	ENSG00000129534|ENST00000310806|MIS18BP1;MIS18BP1|p.K1063Nfs*18|1|0.14|ENSG00000129534|chr14:45206134-45206134|T/-|frameshift_variant;MIS18BP1|p.M66*|1|0.35|ENSG00000129534|chr14:45247091-45247091|T/-|frameshift_variant;MIS18BP1|p.N380Ifs*3|5|0.35|ENSG00000129534|chr14:45242038-45242038|T/-|frameshift_variant;MIS18BP1|p.S991Nfs*17|1|0.35|ENSG00000129534|chr14:45217046-45217050|TGTAC/-|frameshift_variant;MIS18BP1|p.V839Sfs*20|1|0.14|ENSG00000129534|chr14:45224073-45224073|G/-|frameshift_variant;nc|ENSG00000129534|Q6P0N0-2|MIS18BP1	56.43379154798735	0.2433427591689151	4				NaN	NaN	0	NaN	7813	3241	11054
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11057	29.766	NaN	4267	30	0	972.4	0.106	+			7958	DSPFIAHI	8	55	450.2347542684378	898.4549556036757	2	450.2347106933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DSPFIAHI_	ENSG00000128591|ENST00000325888|FLNC;FLNC|p.A1081Rfs*17|1|0.11|ENSG00000128591|chr7:128844701-128844701|C/-|frameshift_variant;FLNC|p.H2471Tfs*58|1|0.18|ENSG00000128591|chr7:128856767-128856767|C/-|frameshift_variant;FLNC|p.R1426Gfs*12|1|0.33|ENSG00000128591|chr7:128846887-128846887|G/-|frameshift_variant;FLNC|p.V1896Wfs*57|1|0.04|ENSG00000128591|chr7:128851472-128851472|G/-|frameshift_variant;nc|ENSG00000128591|Q14315-2|FLNC	46.76643321282427	0.6143254112625767	4				NaN	NaN	0	NaN	7814	3241	11054
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11058	29.768	NaN	3965.9	30	0	315.73	0.106	+			11629	FQAPTAKEM	9	66	511.752539227426	1021.490525521652	2	511.7525634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FQAPTAKEM_	ENSG00000125637|ENST00000245796|PSD4;ENST00000409656.5_1_2:113943320-113958989:+|nuORF;ENST00000418251.6_1_2:113943320-113958989:+|nuORF;nc|ENSG00000125637|Q8NDX1-2|PSD4;PSD4|p.S882P|1|0.5|ENSG00000125637|chr2:113198759-113198759|T/C|missense_variant	52.936696900407355	0.27249468807391813	4				NaN	NaN	0	NaN	7815	3241	11054
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11059	29.77	NaN	4370.3	30	0	572.17	0.106	+			17699	IELNQQNKL	9	76	550.309209451726	1098.603865970252	2	550.308837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IELNQQNKL_	ENSG00000134996|ENST00000346234|OSTF1;OSTF1|p.K191Rfs*11|1|0.32|ENSG00000134996|chr9:75140914-75140914|A/-|frameshift_variant	112.41091882917199	0.026537921851008135	4				NaN	NaN	0	NaN	7816	3241	11054
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11060	29.771	NaN	3495.1	30	0	358.21	0.035	+			23318	KYQGVTQGF	9	62	514.2642940593169	NaN	0	514.2643432617188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KYQGVTQGF_	ENSG00000162923|ENST00000414423|WDR26;ENST00000479727.1_1_1:224585697-224586694:-|nuORF;ENST00000486652.5_1_1:224577539-224589708:-|nuORF;nc|ENSG00000162923|Q9H7D7-2|WDR26;nc|ENSG00000162923|Q9H7D7|WDR26	47.95952297671804	0.22075498469600283	4				NaN	NaN	0	NaN	7817	3241	11054
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11061	29.772	NaN	3642.4	30	0	531.59	0.141				-1	LFCPVSKME	9	66	535.2570190429688	NaN	0	535.2570190429688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_LFCPVSKM(Oxidation (M))E_	ENSG00000127191|ENST00000247668|TRAF2;nc|ENSG00000127191|Q12933-2|TRAF2;nc|ENSG00000127191|Q12933-3|TRAF2;nc|ENSG00000127191|Q12933-4|TRAF2	34.172542307311794	0.30503706118289736	4				NaN	NaN	0	NaN	7818	3241	11054
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11079	29.811	NaN	81299	30	0	30938	0.214	+			19198	IYTSSVNRL	9	75	526.7902706487655	1051.565988364331	2	526.7907104492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IYTSSVNRL_	ENSG00000184432|ENST00000333188|COPB2;nc|ENSG00000184432|P35606-2|COPB2	120.8684288430529	0.02067403653475984	4				NaN	NaN	0	NaN	7833	3244	11078
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11080	29.815	NaN	8645.3	30	0	2740	0.106				-1	 	0	84	327.73789726492697	653.461241596654	2	327.73809814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7834	3244	11078
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11081	29.817	NaN	5506.4	30	0	2062.7	0.106			+	-1	VCECMPTCT	9	68	579.2100146759985	1156.405476418797	2	579.2099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	3 Carbamidomethyl (C)	_VC(Carbamidomethyl (C))EC(Carbamidomethyl (C))MPTC(Carbamidomethyl (C))T_	REV__ENST00000544665.7_1_16:31343047-31343377:+|nuORF	38.80614096846853	0.43426287593479557	4				NaN	NaN	0	NaN	7835	3244	11078
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11082	29.819	NaN	3285.2	30	0	330.7	0.106	+			43073	TELTNLIKI	9	65	522.818675940397	1043.622798947594	2	522.8186645507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TELTNLIKI_	ENSG00000198887|ENST00000361138|SMC5;SMC5|p.F947Lfs*40|1|0.1|ENSG00000198887|chr9:70347984-70347984|T/-|frameshift_variant	41.42661286455405	0.403525789677298	4				NaN	NaN	0	NaN	7836	3244	11078
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11083	29.82	NaN	3749.9	30	0	517.56	0.106			+	-1	LMFHKRKDS	9	73	589.311692908984	1176.608832884768	2	589.8135986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_LM(Oxidation (M))FHKRKDS_	REV__ENSG00000168214|ENST00000355476|RBPJ;REV__ENST00000506903.1_1_4:26422193-26426401:+|nuORF;REV__ENST00000511451.5_1_4:26364233-26422385:+|nuORF;REV__ENST00000514380.5_1_4:26322378-26431729:+|nuORF;REV__nc|ENSG00000168214|Q06330-2|RBPJ;REV__nc|ENSG00000168214|Q06330-3|RBPJ;REV__nc|ENSG00000168214|Q06330-4|RBPJ;REV__nc|ENSG00000168214|Q06330-5|RBPJ;REV__nc|ENSG00000168214|Q06330-6|RBPJ;REV__nc|ENSG00000168214|Q06330|RBPJ;REV__RBPJ|p.E234Sfs*26|1|0.15|ENSG00000168214|chr4:26424657-26424666|GAATTCACAG/-|frameshift_variant;REV__RBPJ|p.N176Mfs*30|1|0.34|ENSG00000168214|chr4:26420713-26420713|A/-|frameshift_variant	37.15910966729921	0.4535818937225704	4				NaN	NaN	0	NaN	7837	3244	11078
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11084	29.822	NaN	5004.5	30	0	587.47	0.037			+	11109	FFLLIREW	8	69	562.3163354043799	1122.6181178755596	2	562.31689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FFLLIREW_	REV__tr|U7T0X3|U7T0X3_FUSNUDUF1275domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00713PE=4SV=1	49.21078951299608	0.5991576752473486	4				NaN	NaN	0	NaN	7838	3244	11078
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11085	29.823	NaN	2815.7	30	0	378.27	0.14			+	-1	ARTLCVPL	8	53	465.2658529800768	928.5171530269536	2	465.26336669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_ARTLC(Carbamidomethyl (C))VPL_	REV__ENSG00000135144|ENST00000548759|DTX1	26.79610172149135	0.7524337208463756	4				NaN	NaN	0	NaN	7839	3244	11078
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11103	29.861	NaN	9239.5	30	0	4479.4	0.214	+			7920	DSFGIRAKK	9	70	511.2925240036224	1020.5704950740449	2	511.29241943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DSFGIRAKK_	ENSG00000165156|ENST00000395571|ZHX1;ZHX1|p.T668Hfs*37|1|0.1|ENSG00000165156|chr8:123253945-123253945|T/-|frameshift_variant;ZHX1|p.T668Nfs*3|1|0.48|ENSG00000165156|chr8:123253944-123253945|-/T|frameshift_variant	37.81151784470057	0.4459294069877048	4				NaN	NaN	0	NaN	7854	3247	11102
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11104	29.865	NaN	8665.7	30	0	2346	0.106	+			1192	AENSKGRDTV	10	66	538.7699236413974	1075.5252943495948	2	538.7697143554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AENSKGRDTV_	ENSG00000184144|ENST00000331830|CNTN2;ENST00000530117.5_1_1:205027631-205031234:+|nuORF	41.42661286455405	0.5359995577334734	4				NaN	NaN	0	NaN	7855	3247	11102
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11105	29.867	NaN	3409.7	30	0	353.08	0.106	+			42908	TEHVKTKPL	9	69	351.54129344884734	1051.602050946742	3	351.5414733886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TEHVKTKPL_	CCDC73|p.R1066Efs*13|1|0.08|ENSG00000186714|chr11:32602859-32602859|C/-|frameshift_variant;ENSG00000186714|ENST00000335185|CCDC73	51.33545320467046	0.2872990594074956	4				NaN	NaN	0	NaN	7856	3247	11102
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11106	29.868	NaN	4321.2	30	0	693.79	0.106			+	49160	VVMLPLGTGLC	11	63	551.8020875196967	1101.5896221061932	2	551.8018798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVMLPLGTGLC_	REV__ENST00000589179.5_1_12:53590293-53590665:-|nuORF	44.116797842482775	0.5016126852448448	4				NaN	NaN	0	NaN	7857	3247	11102
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11107	29.87	NaN	3353.3	30	0	589.33	0.106	+			1961	AIVKLFLKK	9	64	530.3681679480302	1058.7217829628603	2	530.367919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AIVKLFLKK_	AP2B1|p.N760Ifs*17|1|0.37|ENSG00000006125|chr17:35674314-35674314|A/-|frameshift_variant;ENSG00000006125|ENST00000610402|AP2B1;ENSG00000100280|ENST00000357586|AP1B1;nc|ENSG00000006125|P63010-3|AP2B1;nc|ENSG00000006125|P63010|AP2B1;nc|ENSG00000100280|Q10567-2|AP1B1;nc|ENSG00000100280|Q10567-3|AP1B1;nc|ENSG00000100280|Q10567-4|AP1B1	60.11826168202944	0.21262886028301267	4				NaN	NaN	0	NaN	7858	3247	11102
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11108	29.872	NaN	3802.9	30	0	967.43	0.106				-1	KLTVLCSAPG	10	60	523.2876297909179	1044.5607066486357	2	523.28759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_KLTVLC(Carbamidomethyl (C))SAPG_	ENSG00000177981|ENST00000317697|ASB8	40.77816245573522	0.5419747034533848	4				NaN	NaN	0	NaN	7859	3247	11102
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11109	29.874	NaN	5314.4	30	0	771.5	0.039	+			47602	VRSSRPAQPTW	11	67	642.84308583394	1283.67161873468	2	642.8436889648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VRSSRPAQPTW_	AluSz_dup93694|chr19:16102069-16102357:+|7.731269292554917|0.1659909287906949|5.54|483.0|10|3|sense	19.996771675451527	0.7768568223548057	4				NaN	NaN	0	NaN	7860	3247	11102
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11126	29.909	NaN	5436.2	30	0	2504.4	0.214			+	2130	ALIRPIEFG	9	66	339.2023138137871	1014.5851120415614	3	339.20263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ALIRPIEFG_	REV__ENSG00000118307|ENST00000395987|DNAI7;REV__ENST00000557684.5_1_12:25267803-25348012:-|nuORF;REV__nc|ENSG00000118307|Q6TDU7-2|DNAI7;REV__nc|ENSG00000118307|Q6TDU7-3|DNAI7;REV__nc|ENSG00000118307|Q6TDU7-4|DNAI7;REV__nc|ENSG00000118307|Q6TDU7|DNAI7	35.61828744233558	0.47037581924408073	4				NaN	NaN	0	NaN	7874	3250	11125
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11127	29.912	NaN	5858	30	0	2113.2	0.106	+			23738	LAYIAHPKLG	10	88	361.5498621204273	1081.627756961482	3	361.54998779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LAYIAHPKLG_	ENSG00000162244|ENST00000294189|RPL29;ENST00000480306.5_1_3:52027767-52028806:-|nuORF	36.446750945000026	0.5818864909973037	4				NaN	NaN	0	NaN	7875	3250	11125
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11128	29.915	NaN	10445	30	0	2012.6	0.106			+	9936	EQVWQLAL	8	77	493.76684788146275	985.5191428297255	2	493.7665100097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EQVWQLAL_	REV__ENSG00000087085|ENST00000241069|ACHE;REV__ENST00000442452.1_1_7:100490234-100491508:-|nuORF;REV__nc|ENSG00000087085|P22303-2|ACHE;REV__nc|ENSG00000087085|P22303-3|ACHE;REV__nc|ENSG00000087085|P22303-4|ACHE	56.72105179125745	0.5342425954139568	4				NaN	NaN	0	NaN	7876	3250	11125
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11129	29.916	NaN	5214.3	30	0	823.26	0.106				-1	 	0	71	401.21613188981854	800.4177108464371	2	401.216552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7877	3250	11125
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11130	29.918	NaN	3473	30	0	453.63	0.106	+			20970	KKEKHVEP	8	60	497.7877888901617	993.5610248471235	2	497.7873840332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KKEKHVEP_	ENSG00000186439|ENST00000334268|TRDN;TRDN|p.E519Gfs*9|1|0.07|ENSG00000186439|chr6:123278331-123278332|-/T|frameshift_variant;TRDN|p.E606Sfs*14|1|0.05|ENSG00000186439|chr6:123260627-123260628|-/CCAAAAGGCT|frameshift_variant;TRDN|p.T573Nfs*11|1|0.39|ENSG00000186439|chr6:123271141-123271142|-/T|frameshift_variant;TRDN|p.V538Cfs*8|1|0.28|ENSG00000186439|chr6:123273350-123273350|T/-|frameshift_variant	24.20275056022122	0.7724576178584145	4				NaN	NaN	0	NaN	7878	3250	11125
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11131	29.92	NaN	4896.2	30	0	589.38	0.035				-1	CPLTRLGRG	9	70	515.2839626906474	1028.5533724480947	2	515.28759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_C(Carbamidomethyl (C))PLTRLGRG_	ENST00000425542.5_1_22:38072875-38075753:+|nuORF	29.170058357718403	0.5306379469863586	4				NaN	NaN	0	NaN	7879	3250	11125
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11132	29.921	NaN	4854.8	30	0	718.23	0.143	+			12768	GELLLHRVFR	10	73	620.3692096793887	NaN	0	620.369384765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GELLLHRVFR_	ENST00000258399.7_1_2:219427411-219427504:-|nuORF	18.531049691330335	0.4201028297492154	4				NaN	NaN	0	NaN	7880	3250	11125
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11150	29.959	NaN	3608.5	30	0	555.27	0.214	+			2205	ALPVALAVPPA	11	59	340.21519360450486	NaN	0	340.2154235839844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ALPVALAVPPA_	ENST00000584346.1_1_18:10724726-10725338:+|nuORF	27.047317107675042	0.44487757903053116	4				NaN	NaN	0	NaN	7895	3253	11149
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11151	29.963	NaN	4504.5	30	0	1260.3	0.106			+	-1	TMKEGTINT	9	54	505.7461530503848	NaN	0	505.74627685546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_TM(Oxidation (M))KEGTINT_	REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-10|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-13|TTN;REV__nc|ENSG00000155657|Q8WZ42-2|TTN;REV__nc|ENSG00000155657|Q8WZ42-3|TTN;REV__nc|ENSG00000155657|Q8WZ42-4|TTN;REV__nc|ENSG00000155657|Q8WZ42-5|TTN;REV__nc|ENSG00000155657|Q8WZ42-7|TTN;REV__nc|ENSG00000155657|Q8WZ42-8|TTN;REV__nc|ENSG00000155657|Q8WZ42-9|TTN;REV__nc|ENSG00000155657|Q8WZ42|TTN;REV__TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;REV__TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;REV__TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;REV__TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;REV__TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant	24.519189625965996	0.35377483217337163	4				NaN	NaN	0	NaN	7896	3253	11149
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11152	29.965	NaN	5249.4	30	0	603.58	0.106			+	26502	LTMPERFNT	9	64	554.7764554501581	1107.538357967116	2	554.776611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LTMPERFNT_	REV__CACNA2D2|p.V575M|1|0.34|ENSG00000007402|chr3:50376013-50376013|C/T|missense_variant	31.529811441608018	0.5085848003137583	4				NaN	NaN	0	NaN	7897	3253	11149
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11153	29.967	NaN	4507.7	30	0	864.31	0.106				-1	MSNTYTTL	8	70	473.7137208868207	NaN	0	473.71380615234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_M(Oxidation (M))SNTYTTL_	ENSG00000119547|ENST00000491143|ONECUT2	51.19269402634007	1.7418937515398478	4				NaN	NaN	0	NaN	7898	3253	11149
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11154	29.968	NaN	3703.3	30	0	257.81	0.035	+			39133	SSVFLAIKK	9	73	496.8105627589506	991.6065725847012	2	496.81060791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSVFLAIKK_	ENST00000274030.10_1_4:120160492-120160642:+|nuORF	76.7741389293348	0.11149722112137898	4				NaN	NaN	0	NaN	7899	3253	11149
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11170	30.001	NaN	8563.8	30	0	5014.2	0.214	+			41522	SVPTSRVTL	9	63	480.27971318379986	958.5448734343997	2	480.27960205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVPTSRVTL_	ENST00000577379.5_1_17:79980635-79980701:-|nuORF	47.95952297671804	0.32689736945648856	4				NaN	NaN	0	NaN	7912	3256	11169
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11171	30.005	NaN	6845.7	30	0	559.3	0.106			+	-1	MKNQKMISE	9	78	562.77406080076	1123.53356866832	2	562.7744750976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_MKNQKM(Oxidation (M))ISE_	REV__NEDD9|p.N652S|1|0.29|ENSG00000111859|chr6:11188258-11188258|T/C|missense_variant	82.24051045832904	0.08786059719216216	4				NaN	NaN	0	NaN	7913	3256	11169
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11172	30.007	NaN	5463.4	30	0	702.74	0.106			+	51127	YNEKSKQLDQT	11	77	677.3340675842344	1352.6535822352687	2	677.3329467773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YNEKSKQLDQT_	REV__FCHO2|p.A135D|1|0.4|ENSG00000157107|chr5:72990773-72990773|C/A|missense_variant	30.568863376406313	0.6691487505135859	4				NaN	NaN	0	NaN	7914	3256	11169
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11173	30.009	NaN	5453.7	30	0	950.53	0.106	+			10913	FDIEDYIFT	9	61	581.768176334682	1161.521799736164	2	581.7677612304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FDIEDYIFT_	EDEM3|p.F658Lfs*4|1|0.35|ENSG00000116406|chr1:184708216-184708216|A/-|frameshift_variant;ENSG00000116406|ENST00000318130|EDEM3;nc|ENSG00000116406|Q9BZQ6-2|EDEM3	44.116797842482775	0.37197099687881774	4				NaN	NaN	0	NaN	7915	3256	11169
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11174	30.011	NaN	4194.2	30	0	722.71	0.106				-1	 	0	63	505.0862483569856	504.0789718903856	1	505.08685302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7916	3256	11169
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11175	30.013	NaN	3039	30	0	425.51	0.036	+			20649	KGKHNLLGPD	10	59	539.8053166830541	NaN	0	539.8056640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KGKHNLLGPD_	ENSG00000169933|ENST00000675598|FRMPD4;FRMPD4|p.A947Qfs*130|1|0.42|ENSG00000169933|chrX:12717658-12717658|C/-|frameshift_variant;FRMPD4|p.C618Vfs*8|1|0.19|ENSG00000169933|chrX:12716306-12716306|C/-|frameshift_variant;FRMPD4|p.K1053Dfs*26|1|0.08|ENSG00000169933|chrX:12717982-12717983|-/GACTT|frameshift_variant;FRMPD4|p.L1210Pfs*39|1|0.05|ENSG00000169933|chrX:12718454-12718455|-/CT|frameshift_variant;FRMPD4|p.S1105Vfs*3|1|0.29|ENSG00000169933|chrX:12718134-12718134|A/-|frameshift_variant;nc|ENSG00000169933|Q14CM0|FRMPD4	47.657333605630114	0.3204131577145918	4				NaN	NaN	0	NaN	7917	3256	11169
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11176	30.013	NaN	1546.5	30	0	207.32	0.139				-1	PHVICNTL	8	42	477.2467346191406	NaN	0	477.2467346191406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_PHVIC(Carbamidomethyl (C))NTL_	ENSG00000133317|ENST00000394618|LGALS12;nc|ENSG00000133317|Q96DT0-2|LGALS12;nc|ENSG00000133317|Q96DT0-3|LGALS12;nc|ENSG00000133317|Q96DT0-4|LGALS12;nc|ENSG00000133317|Q96DT0-6|LGALS12;nc|ENSG00000133317|Q96DT0-7|LGALS12;nc|ENSG00000133317|Q96DT0|LGALS12	23.04248740728303	1.7418937515398478	4				NaN	NaN	0	NaN	7918	3256	11169
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11194	30.052	NaN	4858.9	30	0	782.57	0.214			+	9066	EGGKQLMML	9	64	503.7561837180682	NaN	0	503.75604248046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EGGKQLMML_	REV__nc|ENSG00000211813|A0A0B4J273|TRAV34	37.81151784470057	0.28666463014928195	4				NaN	NaN	0	NaN	7933	3259	11193
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11195	30.055	NaN	5255.6	30	0	484.15	0.106			+	10026	ERVIKRTE	8	73	515.8047671293774	NaN	0	515.806640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ERVIKRTE_	REV__ENSG00000134987|ENST00000513710|WDR36;REV__ENST00000505303.5_1_5:110428043-110447004:+|nuORF;REV__nc|ENSG00000134987|Q8NI36|WDR36	44.116797842482775	1.7418937515398478	4				NaN	NaN	0	NaN	7934	3259	11193
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11196	30.058	NaN	4951.8	30	0	893.42	0.106	+			49665	VYISEHEHF	9	63	580.7725409817297	1159.5305290302592	2	580.7717895507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYISEHEHF_	ENSG00000104853|ENST00000337392|CLPTM1;nc|ENSG00000104853|O96005-3|CLPTM1;nc|ENSG00000104853|O96005-4|CLPTM1	24.519189625965996	0.574102787014149	4				NaN	NaN	0	NaN	7935	3259	11193
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11197	30.059	NaN	2760.4	30	0	543.07	0.106				-1	 	0	40	451.21357994628954	450.20630347968955	1	451.23980712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	7936	3259	11193
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11198	30.061	NaN	1654.3	30	0	298.02	0.106			+	43304	TFTKTCTPV	9	53	499.2541198730469	NaN	0	499.2541198730469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TFTKTCTPV_	REV__ENSG00000188994|ENST00000369577|ZNF292;REV__nc|ENSG00000188994|O60281-2|ZNF292;REV__ZNF292|p.L2169Efs*9|1|0.45|ENSG00000188994|chr6:87260133-87260134|TT/-|frameshift_variant;REV__ZNF292|p.N2626Kfs*10|1|0.07|ENSG00000188994|chr6:87261506-87261509|ATTC/-|frameshift_variant;REV__ZNF292|p.R2545Gfs*14|1|0.18|ENSG00000188994|chr6:87261256-87261256|A/-|frameshift_variant;REV__ZNF292|p.S2064Lfs*9|1|0.05|ENSG00000188994|chr6:87259817-87259818|-/ATTACTGTGGGTA|frameshift_variant	20.94693142431847	0.3660861156085067	4				NaN	NaN	0	NaN	7937	3259	11193
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11199	30.063	NaN	4135.4	30	0	424.07	0.034			+	24005	LECGTKPQV	9	66	487.75281705921606	973.4910811852321	2	487.75579833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LECGTKPQV_	REV__ENSG00000068985|ENST00000376150|PAGE1	51.33545320467046	0.2872990594074956	4				NaN	NaN	0	NaN	7938	3259	11193
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11200	30.064	NaN	2895.1	30	0	363.52	0.141			+	9442	EKLEEMVLE	9	63	560.2822265625	NaN	0	560.2822265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EKLEEMVLE_	REV__ENSG00000056291|ENST00000308744|NPFFR2;REV__ENST00000506359.1_1_4:73012322-73013526:+|nuORF;REV__nc|ENSG00000056291|Q9Y5X5-3|NPFFR2;REV__nc|ENSG00000056291|Q9Y5X5|NPFFR2	27.882242232435846	0.3367954786602879	4				NaN	NaN	0	NaN	7939	3259	11193
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11218	30.103	NaN	3791.6	30	0	1386.1	0.214	+			23485	LAFLVGSHIS	10	72	348.53422216015747	1042.5808370806724	3	348.5343017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LAFLVGSHIS_	ENSG00000086159|ENST00000315520|AQP6	18.324413293986947	0.7233354337501514	4				NaN	NaN	0	NaN	7954	3262	11217
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11219	30.106	NaN	6051.3	30	0	1032.5	0.106			+	23770	LCHWEELS	8	75	508.7306411699373	1015.4467294066746	2	508.7306213378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LCHWEELS_	REV__ENSG00000081665|ENST00000540806|ZNF506;REV__ENSG00000160229|ENST00000344519|ZNF66;REV__ENSG00000184635|ENST00000343769|ZNF93;REV__ENSG00000188171|ENST00000601440|ZNF626;REV__ENSG00000197134|ENST00000594947|ZNF257;REV__ENSG00000213988|ENST00000418063|ZNF90;REV__ENSG00000237440|ENST00000427401|ZNF737;REV__ENSG00000256229|ENST00000335117|ZNF486;REV__ENSG00000256771|ENST00000589717|ZNF253;REV__ENST00000595094.1_1_19:20736613-20844252:-|nuORF;REV__nc|ENSG00000081665|Q5JVG8-2|ZNF506;REV__nc|ENSG00000184635|P35789-2|ZNF93;REV__nc|ENSG00000184635|P35789-3|ZNF93;REV__nc|ENSG00000188171|Q68DY1-3|ZNF626;REV__nc|ENSG00000197134|Q9Y2Q1-2|ZNF257;REV__nc|ENSG00000197134|Q9Y2Q1-4|ZNF257;REV__ZNF253|p.G115Afs*22|1|0.35|ENSG00000256771|chr19:19891583-19891583|A/-|frameshift_variant;REV__ZNF253|p.G115Rfs*3|1|0.17|ENSG00000256771|chr19:19891582-19891583|-/A|frameshift_variant;REV__ZNF486|p.I203Lfs*28|1|0.33|ENSG00000256229|chr19:20197311-20197311|A/-|frameshift_variant;REV__ZNF486|p.I203Nfs*2|1|0.34|ENSG00000256229|chr19:20197310-20197311|-/A|frameshift_variant;REV__ZNF506|p.E104Dfs*4|1|0.1|ENSG00000081665|chr19:19795575-19795576|-/G|frameshift_variant;REV__ZNF506|p.G116Afs*5|1|0.21|ENSG00000081665|chr19:19795542-19795542|T/-|frameshift_variant;REV__ZNF506|p.G116Rfs*3|2|0.43|ENSG00000081665|chr19:19795541-19795542|-/T|frameshift_variant;REV__ZNF626|p.G116Dfs*3|2|0.17|ENSG00000188171|chr19:20625532-20625532|T/-|frameshift_variant;REV__ZNF626|p.T498Wfs*8|1|0.06|ENSG00000188171|chr19:20624367-20624385|GTATGATTCTCTCATGTGT/-|frameshift_variant;REV__ZNF737|p.F13L|1|0.37|ENSG00000237440|chr19:20553800-20553800|G/T|missense_variant;REV__ZNF93|p.V32Gfs*3|1|0.05|ENSG00000184635|chr19:19915370-19915371|-/GTCCC|frameshift_variant	119.22118168366049	0.23566888071072137	4				NaN	NaN	0	NaN	7955	3262	11217
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11220	30.108	NaN	5153.6	30	0	672.08	0.106	+			1112	AELKQVQTL	9	69	515.2998062098577	NaN	0	515.3013305664062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AELKQVQTL_	ENSG00000127603|ENST00000564288|MACF1;ENST00000476350.1_1_1:39768622-39838291:+|nuORF;MACF1|p.A5223Lfs*8|1|0.21|ENSG00000127603|chr1:39388486-39388486|G/-|frameshift_variant;MACF1|p.N4824Kfs*19|1|0.33|ENSG00000127603|chr1:39387292-39387293|-/A|frameshift_variant;MACF1|p.T4896Lfs*29|1|0.27|ENSG00000127603|chr1:39387507-39387507|A/-|frameshift_variant;nc|ENSG00000127603|Q9UPN3-2|MACF1;nc|ENSG00000127603|Q9UPN3-3|MACF1;nc|ENSG00000127603|Q9UPN3-4|MACF1;nc|ENSG00000127603|Q9UPN3-5|MACF1;nc|ENSG00000127603|Q9UPN3|MACF1	59.93077597824379	0.14961415694175798	4				NaN	NaN	0	NaN	7956	3262	11217
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11221	30.11	NaN	5135.4	30	0	793.43	0.106	+			14848	GTLMWHQMK	9	65	566.2753268994982	1130.5361008657962	2	566.2758178710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTLMWHQMK_	ENST00000346169.6_1_3:184032401-184033585:+|nuORF;ENST00000352767.7_2_3:184032446-184033585:+|nuORF	47.657333605630114	0.33044192980041115	4				NaN	NaN	0	NaN	7957	3262	11217
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11222	30.112	NaN	2467.7	30	0	346.23	0.036				-1	LANMLMGKAD	10	64	548.2644411860283	NaN	0	548.263916015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Oxidation (M)	_LANM(Oxidation (M))LM(Oxidation (M))GKAD_	tr|U7SJ15|U7SJ15_FUSNUDNAhelicaseRecQOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02060PE=3SV=1	29.170058357718403	0.40439580130713204	4				NaN	NaN	0	NaN	7958	3262	11217
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11237	30.143	NaN	9274.5	30	0	979.77	0.213	+			31849	QPTIQIELRQ	10	78	613.3484285601389	1224.6823041870778	2	613.3486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QPTIQIELRQ_	ENSG00000184292|ENST00000371225|TACSTD2	93.44185321454538	0.11136857881027329	4				NaN	NaN	0	NaN	7970	3265	11236
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11238	30.147	NaN	5209.1	30	0	761.35	0.106	+			16035	HAVDVDSGSVY	11	65	574.7650467684762	1147.5155406037522	2	574.7650756835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HAVDVDSGSVY_	ENSG00000071054|ENST00000324219|MAP4K4;MAP4K4|p.G1177Efs*5|1|0.19|ENSG00000071054|chr2:101888826-101888826|G/-|frameshift_variant;nc|ENSG00000071054|O95819-2|MAP4K4;nc|ENSG00000071054|O95819-3|MAP4K4;nc|ENSG00000071054|O95819-4|MAP4K4;nc|ENSG00000071054|O95819-5|MAP4K4;nc|ENSG00000071054|O95819-6|MAP4K4;nc|ENSG00000071054|O95819|MAP4K4	47.657333605630114	0.4531673460382624	4				NaN	NaN	0	NaN	7971	3265	11236
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11239	30.149	NaN	4585.9	30	0	466.5	0.106			+	10945	FDTSHDLRQ	9	67	559.7673465985356	1117.520140263871	2	559.7669067382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FDTSHDLRQ_	REV__ENSG00000114480|ENST00000429644|GBE1;REV__GBE1|p.S671Lfs*36|1|0.18|ENSG00000114480|chr3:81499151-81499151|A/-|frameshift_variant	56.72105179125745	0.24094814563026265	4				NaN	NaN	0	NaN	7972	3265	11236
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11240	30.151	NaN	2323.1	30	0	310.32	0.106	+			27129	MASAVEISSK	10	62	511.7614545643024	NaN	0	511.760986328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MASAVEISSK_	ENSG00000119684|ENST00000355774|MLH3;MLH3|p.F228Lfs*27|1|0.31|ENSG00000119684|chr14:75048972-75048972|A/-|frameshift_variant;MLH3|p.R593Tfs*22|1|0.05|ENSG00000119684|chr14:75047878-75047879|-/AGAACGAATATAAG|frameshift_variant;nc|ENSG00000119684|Q9UHC1-2|MLH3	51.19269402634007	0.2980620950593832	4				NaN	NaN	0	NaN	7973	3265	11236
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11241	30.153	NaN	3972.4	30	0	364.96	0.038	+			8391	EANFFTSQMI	10	78	594.2752310652244	1186.5359091972487	2	594.2755126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EANFFTSQMI_	ENSG00000127054|ENST00000435064|INTS11;ENST00000488042.6_1_1:1250056-1259988:-|nuORF;ENST00000496353.1_1_1:1254237-1254918:-|nuORF;nc|ENSG00000127054|Q5TA45-3|INTS11;nc|ENSG00000127054|Q5TA45-4|INTS11;nc|ENSG00000127054|Q5TA45-5|INTS11	63.53385203322761	0.33370026130094593	4				NaN	NaN	0	NaN	7974	3265	11236
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11259	30.189	NaN	22267	30	0	2671.5	0.215	+			14582	GTFSTVTSTVK	11	79	564.3010802145346	1126.5876074958692	2	564.3009033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTFSTVTSTVK_	ENSG00000182934|ENST00000332118|SRPRA;nc|ENSG00000182934|P08240-2|SRPRA	139.38205640894643	0.0005577063719173977	4				NaN	NaN	0	NaN	7989	3268	11258
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11260	30.192	NaN	4655.3	30	0	549.17	0.106	+			19674	KDMVTQASL	9	62	496.75812115209993	991.5016893709999	2	496.7574157714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KDMVTQASL_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	48.601550744091256	0.3193666407755445	4				NaN	NaN	0	NaN	7990	3268	11258
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11261	30.194	NaN	5153.1	30	0	1399.2	0.036	+			19199	IYTSSVNRL	9	65	526.7902706487655	1051.565988364331	2	526.7911987304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IYTSSVNRL_	ENSG00000184432|ENST00000333188|COPB2;nc|ENSG00000184432|P35606-2|COPB2	67.49366992349736	0.1516260258713357	4				NaN	NaN	0	NaN	7991	3268	11258
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11279	30.231	NaN	16543	30	0	2884.8	0.214	+			40739	SVCVLDLRK	9	80	545.3077519577357	1088.6009509822713	2	545.3078002929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SVC(Carbamidomethyl (C))VLDLRK_	ENSG00000101849|ENST00000645353|TBL1X;ENSG00000177565|ENST00000457928|TBL1XR1;nc|ENSG00000101849|O60907-2|TBL1X;TBL1X|p.G568S|1|0.45|ENSG00000101849|chrX:9714998-9714998|G/A|missense_variant	127.46168284122857	0.016682644177004526	4				NaN	NaN	0	NaN	8006	3271	11278
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11280	30.235	NaN	3712.7	30	0	692.23	0.106	+			42177	SYTSVKENF	9	61	537.7587296717427	1073.5029064102853	2	537.7593383789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SYTSVKENF_	ENSG00000112584|ENST00000476287|FAM120B;FAM120B|p.Y298Ifs*24|1|0.3|ENSG00000112584|chr6:170318277-170318277|T/-|frameshift_variant;nc|ENSG00000112584|Q96EK7-2|FAM120B	74.25504064058377	0.12238981753128622	4				NaN	NaN	0	NaN	8007	3271	11278
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11281	30.237	NaN	5778.5	30	0	839.03	0.106	+			16970	HPQPTQVQF	9	69	541.2749212792382	1080.5352896252764	2	541.2752075195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HPQPTQVQF_	ENSG00000172534|ENST00000310441|HCFC1;HCFC1|p.P1894Lfs*22|1|0.06|ENSG00000172534|chrX:153950835-153950835|G/-|frameshift_variant;nc|ENSG00000172534|P51610-2|HCFC1;nc|ENSG00000172534|P51610-4|HCFC1	51.19269402634007	0.2889735674168909	4				NaN	NaN	0	NaN	8008	3271	11278
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11282	30.238	NaN	2785.6	30	0	261.55	0.035			+	47804	VSIQSKVLK	9	69	501.3211025647344	NaN	0	501.3211364746094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSIQSKVLK_	REV__ENSG00000130935|ENST00000253247|NOL11;REV__ENST00000583108.5_1_17:65735015-65739972:+|nuORF	64.20726635412375	0.13137488984569443	4				NaN	NaN	0	NaN	8009	3271	11278
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11297	30.27	NaN	54693	30	0	14794	0.214				-1	 	0	80	401.21613188981854	800.4177108464371	2	401.2162780761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8021	3274	11296
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11298	30.273	NaN	8670.7	30	0	921.41	0.106	+			48802	VVAAVIWRK	9	80	521.3322862306117	1040.6500195280232	2	521.3321533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVAAVIWRK_	ENSG00000204592|ENST00000376630|HLA-E	134.81075121484326	0.012914550297035062	4				NaN	NaN	0	NaN	8022	3274	11296
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11299	30.276	NaN	4744.2	30	0	854.43	0.106	+			42720	TDFQTHTSL	9	62	525.249172872364	1048.483792811528	2	525.2490844726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TDFQTHTSL_	ENSG00000144589|ENST00000456909|STK11IP;ENST00000475396.5_1_2:220462865-220474366:+|nuORF;STK11IP|p.E522Rfs*80|1|0.11|ENSG00000144589|chr2:219608354-219608354|G/-|frameshift_variant;STK11IP|p.L552Cfs*50|1|0.22|ENSG00000144589|chr2:219608596-219608596|C/-|frameshift_variant	101.45984612302182	0.0377122763612125	4				NaN	NaN	0	NaN	8023	3274	11296
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11300	30.277	NaN	4975.8	30	0	656.68	0.106	+			38953	SSQSLSFPK	9	67	490.756353627881	979.4981543225621	2	490.75604248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSQSLSFPK_	ENSG00000110756|ENST00000349215|HPS5;nc|ENSG00000110756|Q9UPZ3-2|HPS5	76.16968421966216	0.11411088698345859	4				NaN	NaN	0	NaN	8024	3274	11296
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11301	30.279	NaN	2749.4	30	0	245.6	0.106			+	-1	MSAPHLHFV	9	61	352.1750551726201	NaN	0	352.17486572265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_M(Oxidation (M))SAPHLHFV_	REV__ENSG00000157423|ENST00000393567|HYDIN;REV__HYDIN|p.E2653Kfs*4|1|0.27|ENSG00000157423|chr16:70918259-70918259|T/-|frameshift_variant;REV__HYDIN|p.F4256Vfs*111|1|0.27|ENSG00000157423|chr16:70849833-70849834|-/C|frameshift_variant;REV__HYDIN|p.I1986Nfs*6|1|0.45|ENSG00000157423|chr16:70961970-70961971|-/T|frameshift_variant;REV__HYDIN|p.R1703Lfs*51|1|0.5|ENSG00000157423|chr16:70973950-70973951|-/GA|frameshift_variant;REV__HYDIN|p.V3416Gfs*64|1|0.15|ENSG00000157423|chr16:70879725-70879726|-/ACTCC|frameshift_variant;REV__nc|ENSG00000157423|Q4G0P3-5|HYDIN	24.519189625965996	0.35377483217337163	4				NaN	NaN	0	NaN	8025	3274	11296
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11302	30.281	NaN	3681.2	30	0	647.41	0.036			+	-1	LMKSSKGVTM	10	60	557.2871082213467	1112.5596635094932	2	557.2874145507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Oxidation (M)	_LM(Oxidation (M))KSSKGVTM(Oxidation (M))_	REV__ENSG00000125835|ENST00000381342|SNRPB;REV__ENSG00000128739|ENST00000390687|SNRPN;REV__nc|ENSG00000125835|P14678-3|SNRPB;REV__nc|ENSG00000125835|P14678|SNRPB;REV__SNRPN|p.D89Ifs*53|1|0.42|ENSG00000128739|chr15:24976405-24976405|C/-|frameshift_variant	32.81241826257853	0.6118718159329168	4				NaN	NaN	0	NaN	8026	3274	11296
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11303	30.282	NaN	5950.4	30	0	665.03	0.142	+			27007	LYQRAFQHL	9	63	588.319982509066	1174.625412084932	2	588.3193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LYQRAFQHL_	ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC;PRKDC|p.K3681Nfs*6|1|0.32|ENSG00000253729|chr8:47785174-47785177|TTCT/-|frameshift_variant;PRKDC|p.M3670*|1|0.5|ENSG00000253729|chr8:47785212-47785212|T/-|frameshift_variant;PRKDC|p.M3846Cfs*12|1|0.13|ENSG00000253729|chr8:47779047-47779047|T/-|frameshift_variant;PRKDC|p.M4020Cfs*2|1|0.31|ENSG00000253729|chr8:47776968-47776968|T/-|frameshift_variant;PRKDC|p.N3605Kfs*3|1|0.22|ENSG00000253729|chr8:47788993-47788994|-/T|frameshift_variant;PRKDC|p.N4037Ifs*15|1|0.17|ENSG00000253729|chr8:47776916-47776916|T/-|frameshift_variant;PRKDC|p.S3402Ifs*16|1|0.04|ENSG00000253729|chr8:47799302-47799303|-/AAACCGTGAGTTAGAGGAGGTAA|frameshift_variant;PRKDC|p.S4099Qfs*6|1|0.25|ENSG00000253729|chr8:47774265-47774265|A/-|frameshift_variant;PRKDC|p.W3401Cfs*4|1|0.01|ENSG00000253729|chr8:47799304-47799305|-/AATGAATA|frameshift_variant	69.6276240434122	0.14239879520340665	4				NaN	NaN	0	NaN	8027	3274	11296
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11316	30.311	NaN	7417	30	0	667.53	0.214	+			542	ADDWKQEL	8	80	502.7379005571153	1003.4612481810307	2	502.7375793457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ADDWKQEL_	ENSG00000179562|ENST00000321407|GCC1;GCC1|p.T633Afs*8|1|0.05|ENSG00000179562|chr7:127582446-127582447|-/CA|frameshift_variant	73.97473282117947	0.3737790450121076	4				NaN	NaN	0	NaN	8037	3277	11315
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11317	30.315	NaN	4373.1	30	0	764.64	0.106				-1	 	0	68	349.16394634152243	696.3133397498449	2	349.1648864746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8038	3277	11315
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11318	30.317	NaN	4369	30	0	462.37	0.106	+			10816	FANDANKVL	9	63	496.26368816016986	990.5128233871397	2	496.2633972167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FANDANKVL_	ENSG00000123104|ENST00000381340|ITPR2;ITPR2|p.D636Afs*14|1|0.07|ENSG00000123104|chr12:26658110-26658111|-/AATGG|frameshift_variant;ITPR2|p.F471Lfs*2|1|0.21|ENSG00000123104|chr12:26666048-26666048|A/-|frameshift_variant;ITPR2|p.K1802Sfs*13|2|0.65|ENSG00000123104|chr12:26487217-26487217|T/-|frameshift_variant;ITPR2|p.L1313Ffs*10|1|0.43|ENSG00000123104|chr12:26599208-26599209|-/A|frameshift_variant;ITPR2|p.L479Ffs*33|1|0.04|ENSG00000123104|chr12:26666026-26666027|-/GGAACAAA|frameshift_variant;ITPR2|p.N1390Mfs*17|1|0.07|ENSG00000123104|chr12:26596973-26596973|C/-|frameshift_variant;ITPR2|p.N858Kfs*2|1|0.38|ENSG00000123104|chr12:26655723-26655724|-/T|frameshift_variant;ITPR2|p.R1837Gfs*7|1|0.09|ENSG00000123104|chr12:26487113-26487113|T/-|frameshift_variant;ITPR2|p.R1837Kfs*4|1|0.24|ENSG00000123104|chr12:26487112-26487113|-/T|frameshift_variant	68.84614121027924	0.14577793175421136	4				NaN	NaN	0	NaN	8039	3277	11315
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11319	30.319	NaN	6382.8	30	0	702.89	0.106			+	20832	KIGVSGPLIT	10	70	492.8082386886966	983.6019244441932	2	492.8075256347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KIGVSGPLIT_	REV__ENSG00000141293|ENST00000336915|SKAP1;REV__nc|ENSG00000141293|Q86WV1-2|SKAP1	52.936696900407355	0.4300801048568001	4				NaN	NaN	0	NaN	8040	3277	11315
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11320	30.32	NaN	9767.8	30	0	609.98	0.106	+			7750	DNKKYYKYSKE	11	93	733.3691833176631	1464.723813702126	2	733.368408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DNKKYYKYSKE_	ENSG00000136104|ENST00000336617|RNASEH2B;ENST00000495244.6_1_13:51502574-51530607:+|nuORF;nc|ENSG00000136104|Q5TBB1-2|RNASEH2B	36.527901853580055	0.6054519527965578	4				NaN	NaN	0	NaN	8041	3277	11315
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11321	30.322	NaN	6110.4	30	0	597.68	0.106			+	44815	TTSIQLQL	8	72	452.2608161227963	902.5070793123926	2	452.26019287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TTSIQLQL_	REV__nc|ENSG00000117859|Q96SU4-6|OSBPL9	76.84663266511073	0.3498490246073164	4				NaN	NaN	0	NaN	8042	3277	11315
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11322	30.324	NaN	3302.3	30	0	325.56	0.035			+	36754	SHIALGTLVT	10	58	506.2953951044962	1010.5762372757924	2	506.295166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SHIALGTLVT_	REV__ENSG00000106688|ENST00000262352|SLC1A1;REV__SLC1A1|p.Q413Rfs*5|1|0.28|ENSG00000106688|chr9:4583078-4583078|C/-|frameshift_variant	19.996771675451527	0.7148376616046445	4				NaN	NaN	0	NaN	8043	3277	11315
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11340	30.36	NaN	6912.5	30	0	701.52	0.214	+			8376	EALVKTLQK	9	77	515.3191446317911	1028.6237363303821	2	515.31884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EALVKTLQK_	ENSG00000127603|ENST00000564288|MACF1;MACF1|p.A5223Lfs*8|1|0.21|ENSG00000127603|chr1:39388486-39388486|G/-|frameshift_variant;MACF1|p.N4824Kfs*19|1|0.33|ENSG00000127603|chr1:39387292-39387293|-/A|frameshift_variant;MACF1|p.T4896Lfs*29|1|0.27|ENSG00000127603|chr1:39387507-39387507|A/-|frameshift_variant;nc|ENSG00000127603|Q9UPN3-5|MACF1;nc|ENSG00000127603|Q9UPN3|MACF1	78.26377905018397	0.10505600812668463	4				NaN	NaN	0	NaN	8058	3280	11339
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11341	30.364	NaN	4316.5	30	0	439.06	0.106	+			12763	GELKHGPLAL	10	63	517.8039016910468	1033.5932504488935	2	517.8035888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GELKHGPLAL_	ENSG00000131459|ENST00000253778|GFPT2;ENSG00000198380|ENST00000357308|GFPT1;nc|ENSG00000198380|Q06210-2|GFPT1	42.86426827375447	0.522752283233888	4				NaN	NaN	0	NaN	8059	3280	11339
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11342	30.366	NaN	4275.8	30	0	1151.5	0.106				-1	MTARKKSM	8	48	484.7535621356352	967.4925713380704	2	484.7529602050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))TARKKSM_	ENST00000588797.5_1_19:44331964-44332087:+|nuORF	25.450171626174864	0.7628259754767981	4				NaN	NaN	0	NaN	8060	3280	11339
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11343	30.367	NaN	3016.6	30	0	440.2	0.106	+			47368	VPGGVQAR	8	77	392.22828223839747	782.442011543595	2	392.2283020019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VPGGVQAR_	ENSG00000162571|ENST00000379289|TTLL10;nc|ENSG00000162571|Q6ZVT0-2|TTLL10;nc|ENSG00000162571|Q6ZVT0-3|TTLL10	14.664097394203935	0.7913966407026132	4				NaN	NaN	0	NaN	8061	3280	11339
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11344	30.369	NaN	4123	30	0	606.67	0.106				-1	GLRLSHCSH	9	65	533.7641186395041	1065.513684345808	2	533.764404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_GLRLSHC(Carbamidomethyl (C))SH_	DCAF16|p.V104I|1|0.33|ENSG00000163257|chr4:17803832-17803832|C/T|missense_variant;ENSG00000163257|ENST00000382247|DCAF16	30.503639358989545	0.5181749237905803	4				NaN	NaN	0	NaN	8062	3280	11339
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11345	30.371	NaN	4562.7	30	0	586.66	0.035	+			2639	AQINSVFNK	9	65	510.77766624126303	1019.5407795493261	2	510.7770690917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AQINSVFNK_	ENSG00000117597|ENST00000491415|UTP25	63.53385203322761	0.18415635464017938	4				NaN	NaN	0	NaN	8063	3280	11339
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11346	30.372	NaN	5442.4	30	0	533.76	0.143	+			24113	LEKMTEFKEI	10	62	634.3329244181743	1266.6512959031486	2	634.3301391601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LEKMTEFKEI_	tr|U7SXP5|U7SXP5_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00912PE=4SV=1	41.42661286455405	0.5359995577334734	4				NaN	NaN	0	NaN	8064	3280	11339
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11364	30.41	NaN	6956.6	30	0	655.45	0.214	+			1114	AELKSSTVGL	10	74	502.7851208485782	1003.5556887639564	2	502.7847595214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AELKSSTVGL_	ENSG00000071859|ENST00000393600|FAM50A;ENSG00000145945|ENST00000648326|FAM50B;ENST00000481619.5_1_X:153672624-153677371:+|nuORF	99.01295224348159	0.08062808246117298	4				NaN	NaN	0	NaN	8079	3283	11363
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11365	30.414	NaN	6311.7	30	0	1182.7	0.106	+			26274	LSTLRHLTL	9	78	351.8854697800871	1052.6345799404612	3	351.8853759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSTLRHLTL_	ENSG00000154814|ENST00000285083|OXNAD1;ENST00000486267.5_1_3:16312459-16312579:+|nuORF	45.97224482568171	0.3502073465782774	4				NaN	NaN	0	NaN	8080	3283	11363
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11366	30.416	NaN	5248.7	30	0	2046.5	0.106			+	-1	FVAVLILTSC	10	58	561.816409995125	1121.61826705705	2	561.8167114257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_FVAVLILTSC(Carbamidomethyl (C))_	REV__ENSG00000163964|ENST00000392391|PIGX;REV__nc|ENSG00000163964|Q8TBF5-2|PIGX;REV__PIGX|p.K252Q|1|0.08|ENSG00000163964|chr3:196733879-196733879|A/C|missense_variant	31.954861631926434	0.6188749698950511	4				NaN	NaN	0	NaN	8081	3283	11363
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11367	30.418	NaN	2088.5	30	0	211.77	0.106			+	31517	QLGFLERE	8	58	496.26368816016986	990.5128233871397	2	496.26348876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QLGFLERE_	REV__ENSG00000122477|ENST00000370137|LRRC39;REV__nc|ENSG00000122477|Q96DD0-2|LRRC39	30.503639358989545	0.7238069182250283	4				NaN	NaN	0	NaN	8082	3283	11363
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11368	30.42	NaN	5344.8	30	0	1270.1	0.106	+			39962	STMGYMMAK	9	61	510.2218106374847	1018.4290683417694	2	510.2240295410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STMGYMMAK_	ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;ENST00000518337.1_1_8:74128289-74128592:-|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P	74.25504064058377	0.12238981753128622	4				NaN	NaN	0	NaN	8083	3283	11363
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11369	30.421	NaN	5218.1	30	0	660.6	0.036			+	1427	AEYELRNTI	9	75	554.7838738965659	1107.5531948599316	2	554.7860107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEYELRNTI_	REV__ENSG00000185813|ENST00000538936|PCYT2;REV__ENST00000574343.5_1_17:79862711-79863545:-|nuORF;REV__nc|ENSG00000185813|Q99447-2|PCYT2;REV__nc|ENSG00000185813|Q99447-3|PCYT2;REV__nc|ENSG00000185813|Q99447-4|PCYT2	51.19269402634007	0.2889735674168909	4				NaN	NaN	0	NaN	8084	3283	11363
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11387	30.458	NaN	21643	30	0	4140.5	0.214	+			23312	KYQAVTATL	9	72	497.7823669636403	993.5501809940806	2	497.7819519042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KYQAVTATL_	ENSG00000142541|ENST00000391857|RPL13A;ENST00000425147.1_1_21:26734448-26734742:+|nuORF;ENST00000478813.1_1_8:81177882-81177960:-|nuORF;nc|ENSG00000293056|Q6NVV1|RPL13AP3	136.26810882979174	0.012230845423532208	4				NaN	NaN	0	NaN	8099	3286	11386
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11388	30.461	NaN	7181.2	30	0	1042.3	0.106	+			8582	EAYPDHTQF	9	75	554.2412369884015	1106.467921043603	2	554.2411499023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EAYPDHTQF_	ENSG00000151500|ENST00000341541|THYN1;ENST00000533975.1_1_11:134119036-134122923:-|nuORF;nc|ENSG00000151500|Q9P016-2|THYN1;THYN1|p.N194Ifs*15|2|0.22|ENSG00000151500|chr11:134248859-134248859|T/-|frameshift_variant	90.36981228632155	0.0638227155548745	4				NaN	NaN	0	NaN	8100	3286	11386
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11389	30.464	NaN	6160.9	30	0	505.14	0.106				-1	 	0	95	336.5341068044087	1006.5804910134261	3	336.5343322753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8101	3286	11386
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11390	30.465	NaN	6275.4	30	0	736.12	0.106	+			18936	IVNDFAYMKK	10	71	614.8235962746713	1227.6326396161426	2	614.82421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IVNDFAYMKK_	ENSG00000170348|ENST00000303575|TMED10;ENST00000534816.1_1_8:146220430-146220868:+|nuORF;ENST00000555036.1_1_14:75602424-75614456:-|nuORF;ENST00000555873.1_1_14:75601590-75605782:-|nuORF;ENST00000556969.5_1_14:75601590-75614465:-|nuORF	102.0615471778698	0.07157459376830236	4				NaN	NaN	0	NaN	8102	3286	11386
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11391	30.467	NaN	2135.9	30	0	380.34	0.106			+	-1	QQMAPPYGGP	10	48	531.2412728139074	NaN	0	531.2422485351562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_QQM(Oxidation (M))APPYGGP_	REV__CREBBP|p.Q2411Sfs*2|1|0.24|ENSG00000005339|chr16:3727816-3727816|G/-|frameshift_variant;REV__ENSG00000005339|ENST00000262367|CREBBP;REV__nc|ENSG00000005339|Q92793-2|CREBBP	30.503639358989545	0.4000169810673414	4				NaN	NaN	0	NaN	8103	3286	11386
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11392	30.469	NaN	3870.8	30	0	1013	0.037				-1	AMHGRARIAR	10	58	577.8198426632703	1153.6251323933404	2	577.819580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_AM(Oxidation (M))HGRARIAR_	ENSG00000183475|ENST00000332783|ASB7;nc|ENSG00000183475|Q9H672-2|ASB7	27.882242232435846	0.6521336255503853	4				NaN	NaN	0	NaN	8104	3286	11386
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11411	30.506	NaN	47324	30	0	4351.6	0.213	+			30740	QDLKTELLQR	10	97	622.3538454284873	1242.6931379237744	2	622.35400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QDLKTELLQR_	EEA1|p.K257Nfs*13|2|0.34|ENSG00000102189|chr12:92851138-92851138|T/-|frameshift_variant;EEA1|p.N1389Mfs*3|1|0.33|ENSG00000102189|chr12:92776081-92776081|T/-|frameshift_variant;ENSG00000102189|ENST00000322349|EEA1	122.93914200107957	0.02317863035582428	4				NaN	NaN	0	NaN	8120	3289	11410
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11412	30.51	NaN	6983.8	30	0	529.46	0.106	+			12821	GENADSQIKL	10	69	537.7748931133486	1073.5352332934972	2	537.775146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GENADSQIKL_	ENSG00000189060|ENST00000340857|H1-0;nc|ENSG00000189060|P07305-2|H1-0	82.83050618871818	0.17249597090446123	4				NaN	NaN	0	NaN	8121	3289	11410
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11413	30.512	NaN	4173.2	30	0	1180.9	0.106			+	-1	QAINGLNCTC	10	62	575.7544904064474	1149.4944278796947	2	575.7529907226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_QAINGLNC(Carbamidomethyl (C))TC(Carbamidomethyl (C))_	REV__ENST00000475744.1_1_2:61725841-61725943:-|nuORF	31.529811441608018	0.6223461015008678	4				NaN	NaN	0	NaN	8122	3289	11410
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11414	30.514	NaN	3114.5	30	0	608.54	0.106			+	31087	QFKLTVGEF	9	56	534.7902254206223	NaN	0	534.7901000976562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QFKLTVGEF_	REV__ENSG00000220201|ENST00000707000|ZGLP1;REV__nc|ENSG00000220201|P0C6A0-1|ZGLP1	76.7741389293348	0.08243745921263976	4				NaN	NaN	0	NaN	8123	3289	11410
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11415	30.515	NaN	3287.6	30	0	273.31	0.106			+	45354	TVSVKLAEM	9	58	489.2708756816313	976.5271984300626	2	489.2711181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TVSVKLAEM_	REV__ENST00000282382.8_2_5:114915371-114915443:-|nuORF	47.657333605630114	0.33044192980041115	4				NaN	NaN	0	NaN	8124	3289	11410
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11416	30.517	NaN	5022.1	30	0	717.57	0.106			+	7812	DPNEMIEEES	10	56	596.7371342320544	1191.4597155309086	2	596.7377319335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DPNEMIEEES_	REV__RCN2|p.L289M|1|0.37|ENSG00000117906|chr15:76949133-76949133|C/A|missense_variant	19.996771675451527	0.7148376616046445	4				NaN	NaN	0	NaN	8125	3289	11410
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11417	30.519	NaN	4491.2	30	0	853.43	0.037			+	-1	DKDCFPMQK	9	51	592.7559261669055	NaN	0	592.7556762695312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C),Oxidation (M)	_DKDC(Carbamidomethyl (C))FPM(Oxidation (M))QK_	REV__ENSG00000198001|ENST00000613694|IRAK4	27.882242232435846	0.3367954786602879	4				NaN	NaN	0	NaN	8126	3289	11410
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11435	30.557	NaN	12800	30	0	1746.8	0.214	+			12495	GEEGDLKTSL	10	79	524.7617138937898	1047.5088748543794	2	524.7616577148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEEGDLKTSL_	ENSG00000066135|ENST00000372396|KDM4A;KDM4A|p.K699Sfs*7|1|0.06|ENSG00000066135|chr1:43690902-43690902|A/-|frameshift_variant	136.98908636845044	0.01155686115611441	4				NaN	NaN	0	NaN	8141	3292	11434
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11436	30.56	NaN	5152.6	30	0	1253.2	0.106			+	10344	ETTQLERL	8	64	495.2663813836115	988.518209834023	2	495.26641845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ETTQLERL_	REV__CACNA1H|p.C2191Afs*26|4|0.28|ENSG00000196557|chr16:1220496-1220496|C/-|frameshift_variant;REV__CACNA1H|p.F1042V|1|0.13|ENSG00000196557|chr16:1207830-1207830|T/G|missense_variant;REV__CACNA1H|p.F1444Lfs*51|1|0.41|ENSG00000196557|chr16:1211272-1211272|T/-|frameshift_variant;REV__CACNA1H|p.G2053Afs*135|1|0.13|ENSG00000196557|chr16:1220085-1220085|G/-|frameshift_variant;REV__ENSG00000196557|ENST00000348261|CACNA1H;REV__nc|ENSG00000196557|O95180-2|CACNA1H	51.33545320467046	0.5859736979383976	4				NaN	NaN	0	NaN	8142	3292	11434
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11437	30.562	NaN	6461.4	30	0	1053.2	0.106	+			18122	ILESHSFESA	10	64	560.269922971887	1118.525293010574	2	560.2699584960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ILESHSFESA_	ENSG00000100625|ENST00000216513|SIX4	35.61828744233558	0.588957954432594	4				NaN	NaN	0	NaN	8143	3292	11434
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11438	30.564	NaN	4268	30	0	469.43	0.106	+			37435	SLHPQEVDSV	10	72	555.7746581388702	1109.5347633445404	2	555.775146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLHPQEVDSV_	CLEC4F|p.A26V|1|0.45|ENSG00000152672|chr2:70819876-70819876|G/A|missense_variant;ENSG00000152672|ENST00000272367|CLEC4F;nc|ENSG00000152672|Q8N1N0-2|CLEC4F	51.19269402634007	0.44601001148513897	4				NaN	NaN	0	NaN	8144	3292	11434
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11439	30.566	NaN	7743.7	30	0	809.88	0.106				-1	SLPRREYSSSC	11	73	671.3151664302269	1340.6157799272537	2	671.3145141601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_SLPRREYSSSC(Carbamidomethyl (C))_	NPAT|p.K1038Efs*20|1|0.37|ENSG00000149308|chr11:108161974-108161975|-/C|frameshift_variant;NPAT|p.S1040Ifs*18|2|0.28|ENSG00000149308|chr11:108161968-108161969|-/T|frameshift_variant	16.71738777980365	0.7922119881075679	4				NaN	NaN	0	NaN	8145	3292	11434
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11440	30.568	NaN	6680	30	0	1198.9	0.038	+			7555	DHSAIPVINWA	11	73	611.8144069590912	1221.6142609849824	2	611.8145141601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DHSAIPVINWA_	ANPEP|p.R658W|1|0.14|ENSG00000166825|chr15:89799297-89799297|G/A|missense_variant	44.377184641726394	0.49804979881800077	4				NaN	NaN	0	NaN	8146	3292	11434
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11441	30.568	NaN	7461.4	30	0	1025.7	0.145				-1	MFEYFSPVSYN	11	66	700.2982240138982	1398.5818950945963	2	700.2976684570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_M(Oxidation (M))FEYFSPVSYN_	ENSG00000161509|ENST00000293190|GRIN2C;ENST00000584176.1_1_17:72843434-72846906:-|nuORF	18.262085536374414	0.7849791996189919	4				NaN	NaN	0	NaN	8147	3292	11434
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11452	30.594	NaN	7213.4	30	0	1248.3	0.214	+			39821	STLGYTISR	9	74	499.2699551411551	996.5253573491102	2	499.26983642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STLGYTISR_	ENSG00000170464|ENST00000302060|DNAJC18	92.23892857375223	0.05855307001735979	4				NaN	NaN	0	NaN	8155	3295	11451
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11453	30.598	NaN	6158.9	30	0	954.05	0.106	+			4179	ATFLDPRYK	9	66	555.8012606548316	1109.587968376463	2	555.80078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATFLDPRYK_	ENSG00000214717|ENST00000652001|ZBED1	36.446750945000026	0.4619375763483977	4				NaN	NaN	0	NaN	8156	3295	11451
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11454	30.6	NaN	4303.1	30	0	452.17	0.106			+	8840	EELSGRAQPS	10	58	537.262710506245	NaN	0	537.2611083984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EELSGRAQPS_	REV__ENSG00000120318|ENST00000239440|ARAP3;REV__ENST00000512390.1_1_5:141033519-141041645:-|nuORF;REV__nc|ENSG00000120318|Q8WWN8-2|ARAP3	36.446750945000026	0.3805027428805705	4				NaN	NaN	0	NaN	8157	3295	11451
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11455	30.602	NaN	4314.6	30	0	608.64	0.106			+	7010	CRSLGCPQNGH	11	63	614.7708101572392	NaN	0	614.7709350585938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_CRSLGC(Carbamidomethyl (C))PQNGH_	REV__ENST00000245663.8_1_20:62378074-62378224:-|nuORF	47.95952297671804	0.32997419910078585	4				NaN	NaN	0	NaN	8158	3295	11451
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11456	30.604	NaN	2769	30	0	485.06	0.106	+			9970	ERGASQPSCCL	11	51	575.7544904064474	1149.4944278796947	2	576.2550659179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ERGASQPSCCL_	nc|ENSG00000243156|Q7RTP6-3|MICAL3	27.047317107675042	0.7060868989289394	4				NaN	NaN	0	NaN	8159	3295	11451
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11457	30.606	NaN	5058.5	30	0	591.08	0.106			+	-1	ISNSIDNESYM	11	65	644.7744750976562	NaN	0	644.7744750976562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_ISNSIDNESYM(Oxidation (M))_	REV__ENSG00000124181|ENST00000685551|PLCG1;REV__ENST00000473632.1_1_20:39793920-39794467:+|nuORF;REV__nc|ENSG00000124181|P19174|PLCG1;REV__PLCG1|p.L868*|1|0.36|ENSG00000124181|chr20:41169474-41169474|C/-|frameshift_variant	30.568863376406313	0.42918353898720446	4				NaN	NaN	0	NaN	8160	3295	11451
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11458	30.607	NaN	3960.4	30	0	375.76	0.037	+			8706	EECVEQDPGQ	10	70	567.2262736158256	NaN	0	566.7770385742188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EECVEQDPGQ_	ENST00000439351.5_2_3:186288616-186289895:+|nuORF	30.317721548370564	0.4006274431774794	4				NaN	NaN	0	NaN	8161	3295	11451
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11476	30.643	NaN	3518.5	30	0	665.55	0.214				-1	 	0	68	401.21613188981854	800.4177108464371	2	401.21649169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8176	3298	11475
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11477	30.647	NaN	6422.9	30	0	576.94	0.106	+			13008	GEVDVEQHTL	10	71	563.7726438106578	1125.5307346881154	2	563.7737426757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEVDVEQHTL_	ENSG00000134057|ENST00000256442|CCNB1;ENSG00000157456|ENST00000288207|CCNB2;nc|ENSG00000134057|P14635-2|CCNB1	92.23892857375223	0.11825556496531454	4				NaN	NaN	0	NaN	8177	3298	11475
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11478	30.649	NaN	3282.2	30	0	583.9	0.106	+			44661	TTGHGSVGQE	10	60	486.72197372433686	971.4293945154737	2	486.7218933105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TTGHGSVGQE_	ENSG00000185278|ENST00000367701|ZBTB37;nc|ENSG00000185278|Q5TC79-2|ZBTB37;nc|ENSG00000185278|Q5TC79-3|ZBTB37;ZBTB37|p.I398Dfs*70|1|0.34|ENSG00000185278|chr1:173885799-173885800|-/G|frameshift_variant	30.317721548370564	0.6322445173429027	4				NaN	NaN	0	NaN	8178	3298	11475
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11479	30.651	NaN	2255.2	30	0	285.45	0.106			+	29905	PLPPHHHQ	8	54	481.7520237947886	NaN	0	481.75244140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PLPPHHHQ_	REV__ENST00000507175.5_1_5:145838810-145843302:+|nuORF;REV__ENST00000513298.5_1_5:145838810-145849312:+|nuORF	37.028477286268924	1.7418937515398478	4				NaN	NaN	0	NaN	8179	3298	11475
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11480	30.653	NaN	3451.7	30	0	481.92	0.106	+			29346	NYVEVTRKW	9	60	597.8169894263497	NaN	0	597.8165283203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NYVEVTRKW_	ENSG00000173171|ENST00000368376|MTX1;ENST00000440904.1_1_1:155200937-155204113:+|nuORF;ENST00000481771.5_1_1:155181647-155183486:+|nuORF;ENST00000495589.5_1_1:155181271-155183486:+|nuORF;nc|ENSG00000173171|Q13505-2|MTX1;nc|ENSG00000173171|Q13505-3|MTX1	61.76455937419982	0.141793055474112	4				NaN	NaN	0	NaN	8180	3298	11475
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11481	30.654	NaN	5436	30	0	726.18	0.04	+			22287	KTDLFKKEFPK	11	69	690.898193359375	NaN	0	690.898193359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KTDLFKKEFPK_	tr|U7SXB4|U7SXB4_FUSNUTransketolaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00935PE=4SV=1	28.081489160057373	0.4402687122534875	4				NaN	NaN	0	NaN	8181	3298	11475
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11499	30.69	NaN	5081.5	30	0	583.84	0.214			+	30534	QAIVPNKLE	9	75	506.2953951044962	1010.5762372757924	2	506.2953796386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QAIVPNKLE_	REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-10|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-13|TTN;REV__nc|ENSG00000155657|Q8WZ42-2|TTN;REV__nc|ENSG00000155657|Q8WZ42-3|TTN;REV__nc|ENSG00000155657|Q8WZ42-4|TTN;REV__nc|ENSG00000155657|Q8WZ42-5|TTN;REV__nc|ENSG00000155657|Q8WZ42-7|TTN;REV__nc|ENSG00000155657|Q8WZ42-8|TTN;REV__nc|ENSG00000155657|Q8WZ42-9|TTN;REV__nc|ENSG00000155657|Q8WZ42|TTN;REV__TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;REV__TTN|p.D20259Rfs*40|1|0.44|ENSG00000155657|chr2:178583105-178583106|-/T|frameshift_variant;REV__TTN|p.D21555Ifs*6|1|0.33|ENSG00000155657|chr2:178576659-178576659|G/-|frameshift_variant;REV__TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;REV__TTN|p.E20392Dfs*6|1|0.04|ENSG00000155657|chr2:178582357-178582358|-/TTTAAAATTA|frameshift_variant;REV__TTN|p.E20392Kfs*4|1|0.02|ENSG00000155657|chr2:178582359-178582360|-/TTTT|frameshift_variant;REV__TTN|p.F18705Lfs*8|1|0.37|ENSG00000155657|chr2:178590687-178590687|A/-|frameshift_variant;REV__TTN|p.G19920Afs*12|1|0.42|ENSG00000155657|chr2:178584961-178584961|G/-|frameshift_variant;REV__TTN|p.G22029Efs*22|2|0.13|ENSG00000155657|chr2:178575125-178575125|T/-|frameshift_variant;REV__TTN|p.I24998Nfs*2|1|0.35|ENSG00000155657|chr2:178566216-178566217|-/T|frameshift_variant;REV__TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;REV__TTN|p.K26626Nfs*34|1|0.34|ENSG00000155657|chr2:178561331-178561331|T/-|frameshift_variant;REV__TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;REV__TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;REV__TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant;REV__TTN|p.P16126Rfs*3|1|0.25|ENSG00000155657|chr2:178607301-178607302|TG/-|frameshift_variant;REV__TTN|p.P22810Hfs*10|1|0.03|ENSG00000155657|chr2:178572780-178572781|-/AAAT|frameshift_variant;REV__TTN|p.V22573Cfs*4|2|0.31|ENSG00000155657|chr2:178573492-178573492|C/-|frameshift_variant;REV__TTN|p.V27442Cfs*4|1|0.05|ENSG00000155657|chr2:178558107-178558108|-/A|frameshift_variant	45.97224482568171	0.3502073465782774	4				NaN	NaN	0	NaN	8196	3301	11498
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11500	30.694	NaN	3961.8	30	0	408.55	0.106	+			23892	LDIWASLLS	9	69	509.28277679449826	1016.5510006557965	2	509.2828674316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LDIWASLLS_	ENSG00000105641|ENST00000222248|SLC5A5	51.33545320467046	0.2872990594074956	4				NaN	NaN	0	NaN	8197	3301	11498
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11501	30.696	NaN	5331.8	30	0	613.07	0.106	+			12482	GEDSKQALQQL	11	71	608.812002617802	1215.609452302404	2	608.8119506835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEDSKQALQQL_	ENSG00000143375|ENST00000271636|CGN	91.26522074875469	0.0935951923676557	4				NaN	NaN	0	NaN	8198	3301	11498
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11502	30.697	NaN	2931.7	30	0	376.85	0.036	+			32792	RASTQAPAPTV	11	56	549.7989162694633	1097.5832796057266	2	549.8317260742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RASTQAPAPTV_	ENSG00000196338|ENST00000358741|NLGN3;nc|ENSG00000196338|Q9NZ94-2|NLGN3;nc|ENSG00000196338|Q9NZ94-3|NLGN3;NLGN3|p.C544Afs*15|1|0.5|ENSG00000196338|chrX:71167723-71167723|C/-|frameshift_variant	33.921630207806714	0.6339809607503234	4				NaN	NaN	0	NaN	8199	3301	11498
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11520	30.735	NaN	8909.7	30	0	2267.3	0.214	+			26749	LVNFKHLT	8	100	324.52717934448583	970.5597086336575	3	324.5272521972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LVNFKHLT_	tr|U7T2L0|U7T2L0_FUSNUEamAdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00611PE=4SV=1	24.20275056022122	0.7724576178584145	4				NaN	NaN	0	NaN	8214	3304	11519
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11521	30.738	NaN	4738.2	30	0	484.54	0.106	+			15677	GVMTALIKR	9	68	494.8025347663533	987.5905165995066	2	494.8021545410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GVMTALIKR_	ENSG00000204388|ENST00000375650|HSPA1B;ENSG00000204389|ENST00000375651|HSPA1A;ENSG00000204390|ENST00000375654|HSPA1L;nc|ENSG00000204389|P0DMV8-2|HSPA1A	68.84614121027924	0.14577793175421136	4				NaN	NaN	0	NaN	8215	3304	11519
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11522	30.741	NaN	5850.4	30	0	1063.1	0.106			+	11671	FQSTNPSFK	9	68	528.2617509059503	1054.5089488787005	2	528.2617797851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FQSTNPSFK_	REV__BUB3|p.I231Gfs*30|1|0.05|ENSG00000154473|chr10:123162349-123162350|-/GGTAA|frameshift_variant;REV__ENSG00000154473|ENST00000368865|BUB3;REV__nc|ENSG00000154473|O43684-2|BUB3	109.47833844074708	0.029530294723441826	4				NaN	NaN	0	NaN	8216	3304	11519
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11523	30.742	NaN	3046.7	30	0	407.23	0.106			+	21299	KLSEIEKSL	9	68	523.8087675452641	1045.6029821573281	2	523.8088989257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KLSEIEKSL_	REV__ENSG00000173230|ENST00000614479|GOLGB1;REV__nc|ENSG00000173230|Q14789-2|GOLGB1;REV__nc|ENSG00000173230|Q14789-3|GOLGB1;REV__nc|ENSG00000173230|Q14789-4|GOLGB1;REV__nc|ENSG00000173230|Q14789|GOLGB1	58.22992032128504	0.22837015374068087	4				NaN	NaN	0	NaN	8217	3304	11519
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11524	30.744	NaN	6124.6	30	0	763.23	0.106	+			50771	YEKQDTLL	8	64	505.26386628626625	1008.5131796393325	2	505.26373291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YEKQDTLL_	ENSG00000134910|ENST00000392708|STT3A;ENST00000534472.5_1_11:125465789-125479519:+|nuORF;STT3A|p.F106Sfs*45|2|0.41|ENSG00000134910|chr11:125602843-125602843|T/-|frameshift_variant	90.36981228632155	0.27635063874291205	4				NaN	NaN	0	NaN	8218	3304	11519
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11525	30.746	NaN	2921.4	30	0	327.33	0.034	+			38	AAALFTIHK	9	60	486.28751491068067	970.5604768881614	2	486.2872009277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AAALFTIHK_	ENSG00000061676|ENST00000361354|NCKAP1;nc|ENSG00000061676|Q9Y2A7-2|NCKAP1	98.62937762414208	0.04060045538121712	4				NaN	NaN	0	NaN	8219	3304	11519
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11526	30.747	NaN	3084.4	30	0	276.79	0.139			+	11159	FGMKSKKR	8	72	491.28739452211414	NaN	0	491.7366638183594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FGMKSKKR_	REV__ENSG00000114805|ENST00000460012|PLCH1;REV__nc|ENSG00000114805|Q4KWH8-2|PLCH1;REV__nc|ENSG00000114805|Q4KWH8-3|PLCH1;REV__nc|ENSG00000114805|Q4KWH8-4|PLCH1;REV__nc|ENSG00000114805|Q4KWH8|PLCH1;REV__PLCH1|p.L1123Qfs*10|1|0.11|ENSG00000114805|chr3:155482680-155482683|ACAA/-|frameshift_variant;REV__PLCH1|p.Q1461Sfs*24|1|0.37|ENSG00000114805|chr3:155481669-155481669|G/-|frameshift_variant	24.20275056022122	1.7418937515398478	4				NaN	NaN	0	NaN	8220	3304	11519
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11539	30.775	NaN	7121.5	30	0	998.59	0.214	+			8417	EAQLRQFTL	9	74	553.3039604824605	NaN	0	553.3040771484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EAQLRQFTL_	ENSG00000136699|ENST00000680298|SMPD4;ENST00000438378.2_1_2:132275414-132277996:+|nuORF;ENST00000482171.5_1_2:130910130-130912221:-|nuORF;nc|ENSG00000136699|Q9NXE4-10|SMPD4;nc|ENSG00000136699|Q9NXE4-2|SMPD4;nc|ENSG00000136699|Q9NXE4-3|SMPD4;nc|ENSG00000136699|Q9NXE4-4|SMPD4;nc|ENSG00000136699|Q9NXE4-5|SMPD4;nc|ENSG00000136699|Q9NXE4-6|SMPD4;nc|ENSG00000136699|Q9NXE4-7|SMPD4;nc|ENSG00000136699|Q9NXE4-8|SMPD4;nc|ENSG00000136699|Q9NXE4-9|SMPD4;nc|ENSG00000136699|Q9NXE4|SMPD4	51.52775601994872	0.19616436856719055	4				NaN	NaN	0	NaN	8230	3307	11538
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11540	30.779	NaN	4962	30	0	627.48	0.106	+			33105	RELQGQALSP	10	60	549.7989162694633	1097.5832796057266	2	549.7990112304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RELQGQALSP_	ENST00000319080.7_12:122627539-122627764:+|nuORF	54.776311868738084	0.41334902933431344	4				NaN	NaN	0	NaN	8231	3307	11538
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11541	30.781	NaN	4600.7	30	0	555.56	0.106	+			48893	VVDIPFRSK	9	69	530.8110322984164	1059.6075116636327	2	530.8114013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVDIPFRSK_	ENSG00000081177|ENST00000685843|EXD2;nc|ENSG00000081177|Q9NVH0-2|EXD2	56.632244143249146	0.24168844994051353	4				NaN	NaN	0	NaN	8232	3307	11538
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11542	30.783	NaN	3066	30	0	384.55	0.106	+			26169	LSRCVTLGCN	10	56	533.2615677634334	1064.5085825936667	2	533.2622680664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSRCVTLGCN_	ENST00000577646.5_3_17:38465473-38487137:+|nuORF	28.081489160057373	0.6505064946289502	4				NaN	NaN	0	NaN	8233	3307	11538
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11543	30.784	NaN	3013	30	0	450.33	0.106			+	7819	DPSDTLVIEGA	11	66	558.7750514897691	NaN	0	558.7745971679688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DPSDTLVIEGA_	REV__ENSG00000183090|ENST00000329798|FREM3	39.252832667884924	0.39048276625972167	4				NaN	NaN	0	NaN	8234	3307	11538
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11544	30.786	NaN	2904.5	30	0	359.42	0.106			+	24198	LEQQKIQLE	9	56	564.8166999456271	NaN	0	564.8174438476562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LEQQKIQLE_	REV__ENSG00000104218|ENST00000678616|CSPP1;REV__nc|ENSG00000104218|Q1MSJ5-1|CSPP1;REV__nc|ENSG00000104218|Q1MSJ5-2|CSPP1;REV__nc|ENSG00000104218|Q1MSJ5|CSPP1	50.033510581677724	0.206462018841031	4				NaN	NaN	0	NaN	8235	3307	11538
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11545	30.788	NaN	2564	30	0	164.88	0.034	+			37986	SPIISKPKP	9	60	483.80233879473326	NaN	0	483.8022766113281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SPIISKPKP_	ENSG00000170606|ENST00000304858|HSPA4;ENST00000514825.1_1_5:132437411-132440125:+|nuORF	53.08895987439943	0.18540527177656715	4				NaN	NaN	0	NaN	8236	3307	11538
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11563	30.825	NaN	10232	30	0	1084.3	0.214	+			19156	IYQKAFEHL	9	78	574.8088511170648	1147.6031493009295	2	574.808349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IYQKAFEHL_	BBS4|p.E506Vfs*5|1|0.05|ENSG00000140463|chr15:72737544-72737545|AA/-|frameshift_variant;ENSG00000140463|ENST00000268057|BBS4;nc|ENSG00000140463|Q96RK4-2|BBS4;nc|ENSG00000140463|Q96RK4-3|BBS4	155.5846463517096	0.005567437401040498	4				NaN	NaN	0	NaN	8251	3310	11562
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11564	30.828	NaN	3278.1	30	0	506.59	0.106	+			24962	LLAQGQER	8	59	457.7562617645315	913.497970595863	2	457.7561340332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LLAQGQER_	ENST00000318782.8_1_16:3022603-3022840:+|nuORF	44.53106598305862	0.628196326904373	4				NaN	NaN	0	NaN	8252	3310	11562
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11565	30.83	NaN	4165.8	30	0	525.91	0.037	+			10562	EYDWYIFS	8	63	561.7431423542001	1121.4717317752002	2	561.7438354492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EYDWYIFS_	ENSG00000273079|ENST00000609686|GRIN2B;GRIN2B|p.K488Nfs*16|1|0.06|ENSG00000273079|chr12:13615529-13615530|-/CTTCTTCTAAATATAAG|frameshift_variant	42.47446043378293	0.6409579893742323	4				NaN	NaN	0	NaN	8253	3310	11562
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11580	30.861	NaN	4354.6	30	0	443.35	0.214				-1	 	0	87	336.5341068044087	1006.5804910134261	3	336.5342102050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8265	3313	11579
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11581	30.865	NaN	5239	30	0	496.47	0.106	+			30729	QDKVLDIEKR	10	78	622.3538454284873	1242.6931379237744	2	622.3538818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QDKVLDIEKR_	ENSG00000067208|ENST00000684568|EVI5;ENST00000492613.1_1_1:93091344-93142738:-|nuORF;nc|ENSG00000067208|O60447-2|EVI5;nc|ENSG00000067208|O60447|EVI5	60.1669710687717	0.3643216362415131	4				NaN	NaN	0	NaN	8266	3313	11579
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11582	30.867	NaN	3930.9	30	0	512.05	0.106			+	7055	CTGNPWLDMFL	11	74	648.7895283491171	1295.564503765034	2	648.789794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_CTGNPWLDMFL_	REV__ENST00000319357.5_1_7:43664482-43664539:+|nuORF	42.86426827375447	0.5187511139693657	4				NaN	NaN	0	NaN	8267	3313	11579
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11583	30.869	NaN	3918.2	30	0	719.94	0.106	+			36529	SFERVLVENK	10	59	610.8348411435327	NaN	0	610.8355102539062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SFERVLVENK_	ENSG00000144406|ENST00000673920|UNC80;ENST00000478701.1_1_2:210636760-210659540:+|nuORF;nc|ENSG00000144406|Q8N2C7-2|UNC80;nc|ENSG00000144406|Q8N2C7-3|UNC80;nc|ENSG00000144406|Q8N2C7-4|UNC80;nc|ENSG00000144406|Q8N2C7-7|UNC80;nc|ENSG00000144406|Q8N2C7|UNC80;UNC80|p.C1944Afs*12|1|0.28|ENSG00000144406|chr2:209933850-209933850|C/-|frameshift_variant;UNC80|p.N2032*|1|0.42|ENSG00000144406|chr2:209936855-209936856|-/T|frameshift_variant;UNC80|p.P2700Hfs*13|1|0.23|ENSG00000144406|chr2:209972238-209972238|C/-|frameshift_variant;UNC80|p.Q125Rfs*109|1|0.4|ENSG00000144406|chr2:209777327-209777327|C/-|frameshift_variant;UNC80|p.T791Nfs*17|1|0.38|ENSG00000144406|chr2:209825945-209825946|AA/-|frameshift_variant	36.446750945000026	0.3805027428805705	4				NaN	NaN	0	NaN	8268	3313	11579
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11584	30.87	NaN	3514.6	30	0	400.75	0.036	+			31604	QLVEAGRLVA	10	61	528.3143956627933	1054.6142383923866	2	528.3145751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QLVEAGRLVA_	ENSG00000137076|ENST00000314888|TLN1;nc|ENSG00000137076|Q9Y490-2|TLN1;TLN1|p.P1628Rfs*20|1|0.44|ENSG00000137076|chr9:35707144-35707144|G/-|frameshift_variant	35.15202426646627	0.5927656479315102	4				NaN	NaN	0	NaN	8269	3313	11579
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11602	30.907	NaN	11115	30	0	657.29	0.211			+	24285	LEYAPDRSRRC	11	79	711.8493901545593	1421.6842273759185	2	711.8480224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_LEYAPDRSRRC(Carbamidomethyl (C))_	REV__ENSG00000140391|ENST00000267970|TSPAN3;REV__nc|ENSG00000140391|O60637-2|TSPAN3;REV__nc|ENSG00000140391|O60637-3|TSPAN3	67.49366992349736	0.25663419177724	4				NaN	NaN	0	NaN	8284	3316	11601
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11603	30.91	NaN	10535	30	0	5944.2	0.035	+			37767	SLVSPQAKPA	10	74	333.1938999414384	996.5598704245153	3	333.1935729980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLVSPQAKPA_	ENST00000515035.5_1_5:149755479-149759349:+|nuORF	40.05817265558897	0.5486090488315611	4				NaN	NaN	0	NaN	8285	3316	11601
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11619	30.942	NaN	9437.5	30	0	2271.5	0.211	+			11669	FQQIERQEQLL	11	82	716.3833031778721	1430.7520534225441	2	716.3828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FQQIERQEQLL_	ENSG00000100629|ENST00000555265|CEP128;nc|ENSG00000100629|Q6ZU80-1|CEP128	22.579656572578934	0.7529490144093228	4				NaN	NaN	0	NaN	8298	3319	11618
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11620	30.946	NaN	5332	30	0	307.69	0.106	+			23737	LAYIAHPKL	9	68	513.311365839841	1024.6081787464818	2	513.3112182617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LAYIAHPKL_	ENSG00000162244|ENST00000294189|RPL29;ENST00000480306.5_1_3:52027767-52028806:-|nuORF	68.484700416344	0.1473408039581241	4				NaN	NaN	0	NaN	8299	3319	11618
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11621	30.948	NaN	2438.1	30	0	355.27	0.106	+			19670	KDMITWIL	8	70	510.284912109375	NaN	0	510.284912109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KDMITWIL_	ENSG00000159459|ENST00000290650|UBR1;ENST00000564540.5_1_15:43313466-43317626:-|nuORF;UBR1|p.P1614Hfs*32|1|0.22|ENSG00000159459|chr15:42952443-42952443|G/-|frameshift_variant	33.51558372728122	1.7418937515398478	4				NaN	NaN	0	NaN	8300	3319	11618
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11622	30.95	NaN	4379.9	30	0	659.42	0.106	+			2576	AQEDEEPEWR	10	74	644.7745006791223	1287.5344484250445	2	644.774658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AQEDEEPEWR_	ENSG00000017797|ENST00000383432|RALBP1	29.170058357718403	0.6416167986984785	4				NaN	NaN	0	NaN	8301	3319	11618
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11623	30.952	NaN	2504.2	30	0	221.79	0.106	+			22061	KSKRARVAQ	9	64	522.3255088830549	NaN	0	522.3246459960938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KSKRARVAQ_	ENSG00000150990|ENST00000308736|DHX37	33.921630207806714	0.3063038642147651	4				NaN	NaN	0	NaN	8302	3319	11618
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11624	30.953	NaN	2714.1	30	0	292.92	0.106	+			27028	LYTKTWQL	8	64	526.7908856760489	NaN	0	526.7903442382812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LYTKTWQL_	ENST00000466493.5_1_10:70100925-70105500:-|nuORF	40.5726180659479	1.7418937515398478	4				NaN	NaN	0	NaN	8303	3319	11618
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11625	30.955	NaN	1935.1	30	0	263.79	0.035				-1	PWMQQRAV	8	63	516.2559204101562	NaN	0	516.2559204101562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_PWM(Oxidation (M))QQRAV_	ENSG00000163155|ENST00000368908|LYSMD1;nc|ENSG00000163155|Q96S90-2|LYSMD1	35.200714571348534	1.7418937515398478	4				NaN	NaN	0	NaN	8304	3319	11618
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11643	30.992	NaN	239250	30	0	35970	0.157	+			36832	SIFDGRVVAK	10	90	546.3137995287616	1090.613046124323	2	546.3140869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIFDGRVVAK_	ENSG00000143183|ENST00000367881|TMCO1;nc|ENSG00000143183|Q9UM00-2|TMCO1;nc|ENSG00000143183|Q9UM00|TMCO1	128.60217544463768	0.01518043149187549	4				NaN	NaN	0	NaN	8319	3322	11642
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11644	30.995	NaN	5802.9	30	0	965.9	0.106	+			15195	GTSQLYVYR	9	74	543.7825120205632	1085.5504711079263	2	543.7830200195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTSQLYVYR_	CPSF1|p.A1319Pfs*42|2|0.23|ENSG00000071894|chr8:144393943-144393943|C/-|frameshift_variant;CPSF1|p.P950Lfs*6|1|0.13|ENSG00000071894|chr8:144396478-144396478|G/-|frameshift_variant;CPSF1|p.V640Wfs*20|1|0.36|ENSG00000071894|chr8:144398110-144398110|G/-|frameshift_variant;ENSG00000071894|ENST00000616140|CPSF1	96.0336014099291	0.047854655524928534	4				NaN	NaN	0	NaN	8320	3322	11642
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11645	30.997	NaN	8779.7	30	0	4829.4	0.106			+	45257	TVQENGALRQ	10	76	558.2936940539242	1114.5728351746484	2	558.2935791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVQENGALRQ_	REV__ENSG00000160214|ENST00000497547|RRP1;REV__ENST00000492638.1_1_21:45209510-45212627:+|nuORF	58.22992032128504	0.38193887838457763	4				NaN	NaN	0	NaN	8321	3322	11642
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11646	30.998	NaN	3722.3	30	0	509.18	0.106	+			452	AAVGYIMEK	9	61	491.25688790008047	980.499222866961	2	491.25732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AAVGYIMEK_	ENSG00000111361|ENST00000424014|EIF2B1	52.936696900407355	0.27249468807391813	4				NaN	NaN	0	NaN	8322	3322	11642
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11647	31	NaN	2982.5	30	0	502.51	0.106	+			38525	SSCPQQWIK	9	56	567.2745219177439	NaN	0	567.2748413085938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_SSC(Carbamidomethyl (C))PQQWIK_	ENSG00000168275|ENST00000366615|COA6;nc|ENSG00000168275|Q5JTJ3-3|COA6;nc|ENSG00000168275|Q5JTJ3|COA6	56.72105179125745	0.16330365735109603	4				NaN	NaN	0	NaN	8323	3322	11642
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11648	31.002	NaN	1472.9	30	0	154.69	0.034	+			19144	IYNKTTIP	8	50	475.2720947265625	NaN	0	475.2720947265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IYNKTTIP_	ENST00000374012.7_1_20:34537059-34537140:+|nuORF	55.50420428727701	1.7418937515398478	4				NaN	NaN	0	NaN	8324	3322	11642
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11666	31.037	NaN	14970	30	0	2858.3	0.214			+	24730	LHQFGSESI	9	68	509.25369559957306	1016.4928382659461	2	509.2532958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LHQFGSESI_	REV__ENSG00000186105|ENST00000334994|LRRC70;REV__LRRC70|p.N499Tfs*17|1|0.2|ENSG00000186105|chr5:62580928-62580928|A/-|frameshift_variant	93.19546047674547	0.05585629608842056	4				NaN	NaN	0	NaN	8339	3325	11665
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11667	31.041	NaN	3948.2	30	0	860.31	0.106				-1	TNEKGTDSQAM	11	41	599.2562497312649	1196.4979465293297	2	599.2556762695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_TNEKGTDSQAM(Oxidation (M))_	ENSG00000096060|ENST00000357266|FKBP5	18.262085536374414	0.7849791996189919	4				NaN	NaN	0	NaN	8340	3325	11665
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11668	31.043	NaN	5279.5	30	0	2305.9	0.106	+			49558	VYDLMRQCW	9	39	607.2766356084543	NaN	0	607.2764282226562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYDLMRQCW_	ENSG00000120156|ENST00000380036|TEK;nc|ENSG00000120156|Q02763-2|TEK;nc|ENSG00000120156|Q02763-3|TEK	23.04248740728303	0.3589936788096251	4				NaN	NaN	0	NaN	8341	3325	11665
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11669	31.045	NaN	3781.9	30	0	1042.1	0.106			+	8591	ECCQFSLKAK	10	63	578.7762176339189	1155.5378823346377	2	578.7747802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ECCQFSLKAK_	REV__ENSG00000162714|ENST00000682384|ZNF496;REV__nc|ENSG00000162714|Q96IT1-2|ZNF496	33.921630207806714	0.6028135429846169	4				NaN	NaN	0	NaN	8342	3325	11665
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11670	31.046	NaN	4375.6	30	0	418.73	0.106			+	-1	RCYEMQTSVD	10	52	624.25732421875	NaN	0	624.25732421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_RCYEM(Oxidation (M))QTSVD_	REV__CON__P02676	24.519189625965996	0.41966695327750003	4				NaN	NaN	0	NaN	8343	3325	11665
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11671	31.048	NaN	3437.1	30	0	593.78	0.039				-1	CPNECVMSEWG	11	39	656.2405178135275	NaN	0	656.2400512695312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_C(Carbamidomethyl (C))PNECVMSEWG_	ENSG00000144229|ENST00000409968|THSD7B;THSD7B|p.A1522Lfs*3|1|0.32|ENSG00000144229|chr2:137663476-137663476|A/-|frameshift_variant;THSD7B|p.A1522Sfs*2|1|0.16|ENSG00000144229|chr2:137663475-137663476|-/A|frameshift_variant	13.45404412870281	0.456735970842152	4				NaN	NaN	0	NaN	8344	3325	11665
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11672	31.049	NaN	5097.4	30	0	911.9	0.145	+			50153	WKILRMVCQKL	11	49	709.4118525535374	1416.8091521738747	2	709.4110717773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_WKILRMVCQKL_	ENST00000520849.5_1_8:89341227-89341371:+|nuORF	19.1035232394073	0.7810393085260824	4				NaN	NaN	0	NaN	8345	3325	11665
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11690	31.087	NaN	13139	30	0	2039.7	0.213	+			40856	SVFDSSSDMEK	11	79	616.2605310495513	1230.5065091659026	2	616.2608032226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVFDSSSDMEK_	ENSG00000112297|ENST00000633556|CRYBG1;nc|ENSG00000112297|Q9Y4K1-1|CRYBG1	105.16503226865211	0.050009141116738	4				NaN	NaN	0	NaN	8360	3328	11689
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11691	31.091	NaN	6091.5	30	0	766.12	0.106	+			5464	ATYYGAFIKK	10	69	581.3191768685447	1160.6238008038893	2	581.318603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATYYGAFIKK_	ENSG00000071054|ENST00000324219|MAP4K4;ENSG00000141503|ENST00000355280|MINK1;ENSG00000154310|ENST00000436636|TNIK;ENST00000572330.5_1_17:4736842-4793277:+|nuORF;MAP4K4|p.G1177Efs*5|1|0.19|ENSG00000071054|chr2:101888826-101888826|G/-|frameshift_variant;MAP4K4|p.N722Mfs*3|1|0.46|ENSG00000071054|chr2:101867251-101867251|A/-|frameshift_variant;MINK1|p.D1112Gfs*17|1|0.14|ENSG00000141503|chr17:4895797-4895798|-/G|frameshift_variant;MINK1|p.E1253Rfs*14|1|0.42|ENSG00000141503|chr17:4896565-4896565|G/-|frameshift_variant;MINK1|p.F1308Lfs*15|1|0.19|ENSG00000141503|chr17:4897207-4897207|T/-|frameshift_variant;MINK1|p.I705Sfs*101|1|0.26|ENSG00000141503|chr17:4892425-4892425|A/-|frameshift_variant;nc|ENSG00000071054|O95819-2|MAP4K4;nc|ENSG00000071054|O95819-3|MAP4K4;nc|ENSG00000071054|O95819-4|MAP4K4;nc|ENSG00000071054|O95819-5|MAP4K4;nc|ENSG00000071054|O95819-6|MAP4K4;nc|ENSG00000071054|O95819|MAP4K4;nc|ENSG00000141503|Q8N4C8-2|MINK1;nc|ENSG00000141503|Q8N4C8-3|MINK1;nc|ENSG00000141503|Q8N4C8-4|MINK1;nc|ENSG00000141503|Q8N4C8-5|MINK1;nc|ENSG00000154310|Q9UKE5-2|TNIK;nc|ENSG00000154310|Q9UKE5-3|TNIK;nc|ENSG00000154310|Q9UKE5-4|TNIK;nc|ENSG00000154310|Q9UKE5-5|TNIK;nc|ENSG00000154310|Q9UKE5-6|TNIK;nc|ENSG00000154310|Q9UKE5-7|TNIK;nc|ENSG00000154310|Q9UKE5-8|TNIK;TNIK|p.E1253Kfs*13|1|0.04|ENSG00000154310|chr3:171066678-171066678|C/-|frameshift_variant;TNIK|p.F1336Lfs*15|1|0.15|ENSG00000154310|chr3:171063956-171063956|A/-|frameshift_variant;TNIK|p.K261Nfs*11|1|0.25|ENSG00000154310|chr3:171167261-171167261|T/-|frameshift_variant;TNIK|p.N93Efs*7|1|0.3|ENSG00000154310|chr3:171211146-171211147|-/T|frameshift_variant;TNIK|p.S560Ifs*2|1|0.05|ENSG00000154310|chr3:171128809-171128810|-/T|frameshift_variant;TNIK|p.V1263Cfs*3|1|0.42|ENSG00000154310|chr3:171066648-171066648|C/-|frameshift_variant	91.26522074875469	0.12383023862516404	4				NaN	NaN	0	NaN	8361	3328	11689
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11692	31.093	NaN	4912.8	30	0	754.17	0.106	+			5721	AVFLGLARK	9	67	487.81109734140773	973.6076417496155	2	487.8101806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVFLGLARK_	ENSG00000160752|ENST00000368356|FDPS;ENST00000489324.1_1_1:155289446-155290397:+|nuORF;nc|ENSG00000160752|P14324-2|FDPS	55.50420428727701	0.2510918378945873	4				NaN	NaN	0	NaN	8362	3328	11689
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11693	31.095	NaN	3868.2	30	0	475.77	0.106	+			26797	LVSESSDVLPK	11	69	587.3220781029106	1172.6296032726211	2	587.3213500976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LVSESSDVLPK_	CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000425226.1_1_2:203705056-203705395:-|nuORF;ENST00000489121.1_1_3:137820322-137820643:-|nuORF;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	83.6470233535746	0.12478191950840195	4				NaN	NaN	0	NaN	8363	3328	11689
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11694	31.097	NaN	3174.3	30	0	389.5	0.106				-1	ACIFGVTETF	10	59	572.7709792629315	1143.527405592663	2	572.7689819335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_AC(Carbamidomethyl (C))IFGVTETF_	ENSG00000279761|ENST00000623930|OR5D13	37.15910966729921	0.575322462179216	4				NaN	NaN	0	NaN	8364	3328	11689
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11695	31.099	NaN	3860.2	30	0	581.07	0.036	+			49570	VYDTNPAKF	9	71	527.7638271365146	1053.513101339829	2	527.76318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VYDTNPAKF_	ENSG00000139433|ENST00000318348|GLTP	63.53385203322761	0.18415635464017938	4				NaN	NaN	0	NaN	8365	3328	11689
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11713	31.136	NaN	5238	30	0	734.45	0.214			+	47167	VLSSHVLLK	9	63	498.3163123634966	994.6180717937932	2	498.3158874511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VLSSHVLLK_	REV__ENSG00000110077|ENST00000528851|MS4A6A;REV__MS4A6A|p.T185Sfs*29|1|0.24|ENSG00000110077|chr11:60173125-60173126|GT/-|frameshift_variant;REV__nc|ENSG00000110077|Q9H2W1-3|MS4A6A;REV__nc|ENSG00000110077|Q9H2W1-5|MS4A6A;REV__nc|ENSG00000110077|Q9H2W1|MS4A6A	45.9519527083369	0.35044536499095585	4				NaN	NaN	0	NaN	8380	3331	11712
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11714	31.14	NaN	21004	30	0	3317.7	0.106	+			14546	GTEFGGSIYQK	11	77	593.790570285602	1185.566587638004	2	593.7909545898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTEFGGSIYQK_	ENSG00000078668|ENST00000022615|VDAC3;ENSG00000165637|ENST00000332211|VDAC2;ENSG00000213585|ENST00000265333|VDAC1;ENST00000489906.5_1_5:133308464-133311792:-|nuORF;nc|ENSG00000078668|Q9Y277-2|VDAC3;nc|ENSG00000165637|P45880-1|VDAC2;nc|ENSG00000165637|P45880-2|VDAC2	169.6522961985778	2.909638704099596E-05	4				NaN	NaN	0	NaN	8381	3331	11712
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11715	31.142	NaN	7958.2	30	0	1345.3	0.106				-1	LFTLLSWML	9	73	570.3118334405689	1138.6091139479377	2	570.3121948242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_LFTLLSWM(Oxidation (M))L_	ENSG00000221947|ENST00000408926|XKR9	73.97473282117947	0.12360187025703594	4				NaN	NaN	0	NaN	8382	3331	11712
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11716	31.143	NaN	4119.4	30	0	362.68	0.106	+			50436	YACEVTHQGL	10	73	560.7586334427159	1119.5027139522317	2	560.7586669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YACEVTHQGL_	nc|ENSG00000211592|P01834|IGKC	110.11987700582712	0.04764356995208832	4				NaN	NaN	0	NaN	8383	3331	11712
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11717	31.145	NaN	2138.4	30	0	233.89	0.106			+	-1	RCNTCLLY	8	56	550.256410613718	1098.498268294236	2	550.25634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C)	_RC(Carbamidomethyl (C))NTC(Carbamidomethyl (C))LLY_	REV__ENSG00000149212|ENST00000536441|SESN3;REV__nc|ENSG00000149212|P58005-3|SESN3;REV__SESN3|p.Q273Kfs*14|1|0.37|ENSG00000149212|chr11:95184541-95184541|A/-|frameshift_variant	24.20275056022122	0.7724576178584145	4				NaN	NaN	0	NaN	8384	3331	11712
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11718	31.147	NaN	2500.1	30	0	391.62	0.036			+	-1	ACMCCGSACY	10	56	542.6572185997783	NaN	0	542.7939453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),Oxidation (M)	_AC(Carbamidomethyl (C))M(Oxidation (M))CCGSACY_	REV__ENST00000367204.5_1_1:204095493-204095874:+|nuORF	11.511019455917149	0.4201028297492154	4				NaN	NaN	0	NaN	8385	3331	11712
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11736	31.184	NaN	4778.8	30	0	389.58	0.214	+			13342	GKSDPYVKL	9	71	503.78215159550507	1005.5497502578102	2	503.7821350097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GKSDPYVKL_	ENSG00000139641|ENST00000394048|ESYT1;ENST00000547667.5_1_12:56531318-56532071:+|nuORF;nc|ENSG00000139641|Q9BSJ8-2|ESYT1	49.536043120802724	0.308405419312776	4				NaN	NaN	0	NaN	8400	3334	11735
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11737	31.188	NaN	4498.2	30	0	939.76	0.106			+	10303	ETQDTHQPSPA	11	52	605.7694145563349	1209.5242761794698	2	605.7691650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ETQDTHQPSPA_	REV__ENSG00000179889|ENST00000396410|PDXDC1;REV__nc|ENSG00000179889|Q6P996-3|PDXDC1;REV__nc|ENSG00000179889|Q6P996-4|PDXDC1;REV__nc|ENSG00000179889|Q6P996-5|PDXDC1	22.579656572578934	0.7529490144093228	4				NaN	NaN	0	NaN	8401	3334	11735
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11738	31.19	NaN	9727.7	30	0	3916.7	0.106	+			10607	EYLTKVDKL	9	78	554.8163979879382	1107.6182430426763	2	554.815185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EYLTKVDKL_	ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000141367|Q00610-2|CLTC	152.06079943815163	0.00638878961959199	4				NaN	NaN	0	NaN	8402	3334	11735
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11739	31.192	NaN	4649.5	30	0	756.84	0.036			+	43709	TKPKASLNLP	10	60	534.8241232163616	1067.6336934995231	2	534.824462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TKPKASLNLP_	REV__ENSG00000134532|ENST00000451604|SOX5;REV__nc|ENSG00000134532|P35711-2|SOX5;REV__nc|ENSG00000134532|P35711-3|SOX5;REV__nc|ENSG00000134532|P35711-5|SOX5;REV__SOX5|p.K639Sfs*77|1|0.78|ENSG00000134532|chr12:23536525-23536525|T/-|frameshift_variant	46.45678178249821	0.4896490706773647	4				NaN	NaN	0	NaN	8403	3334	11735
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11754	31.223	NaN	3998.6	30	0	744.33	0.214				-1	NDEMTLTM	8	64	485.6973058801676	NaN	0	485.6975402832031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_NDEM(Oxidation (M))TLTM_	ENSG00000182261|ENST00000691676|NLRP10	33.51558372728122	1.7418937515398478	4				NaN	NaN	0	NaN	8415	3337	11753
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11755	31.226	NaN	11361	30	0	1716.3	0.106				-1	TEHAEKLMRLQ	11	81	686.3552483262202	1370.6959437192404	2	686.3538208007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_TEHAEKLM(Oxidation (M))RLQ_	ENSG00000181867|ENST00000321339|FTMT	33.921630207806714	0.6339809607503234	4				NaN	NaN	0	NaN	8416	3337	11753
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11756	31.229	NaN	8388.2	30	0	812.29	0.106			+	38341	SRKWLTIL	8	72	508.8161240668504	1015.6176952005009	2	508.81634521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SRKWLTIL_	REV__ENST00000479512.5_1_3:50387244-50387426:-|nuORF	49.44154591367651	0.597725784090933	4				NaN	NaN	0	NaN	8417	3337	11753
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11757	31.23	NaN	10342	30	0	869.46	0.106	+			4439	ATILAGDIKVK	11	79	564.8532174452462	1127.6918819572923	2	564.8535766601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATILAGDIKVK_	ENSG00000170604|ENST00000302165|IRF2BP1	144.69833601371718	0.0001356525017137265	4				NaN	NaN	0	NaN	8418	3337	11753
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11758	31.232	NaN	3981.9	30	0	337.51	0.106				-1	 	0	83	336.5341068044087	1006.5804910134261	3	336.53411865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8419	3337	11753
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11759	31.234	NaN	4872	30	0	675.91	0.04			+	-1	YGGGAGGC	8	67	698.2562261833449	697.2489497167448	1	697.8798217773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_YGGGAGGC(Carbamidomethyl (C))_	REV__ENSG00000178233|ENST00000451188|TMEM151B	5.08689130490037	0.7762486542322466	4				NaN	NaN	0	NaN	8420	3337	11753
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11773	31.263	NaN	4213.2	30	0	340.37	0.214			+	-1	MMRLSFSF	8	61	517.7433516919469	1033.4721504506938	2	517.7430419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))MRLSFSF_	REV__ENST00000442668.6_3_9:95060594-95062262:-|nuORF;REV__ENST00000463593.6_1_9:95061087-95062271:-|nuORF	68.484700416344	0.4195245774506064	4				NaN	NaN	0	NaN	8431	3340	11772
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11774	31.267	NaN	3311.3	30	0	1145.1	0.106	+			30103	PRGSPASALV	10	55	477.77206666775	953.5295804023	2	477.7715759277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PRGSPASALV_	ENSG00000126243|ENST00000246529|LRFN3	42.86426827375447	0.522752283233888	4				NaN	NaN	0	NaN	8432	3340	11772
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11775	31.269	NaN	3765.3	30	0	529.84	0.106	+			48452	VTLDWAKPK	9	62	529.3058389068175	1056.5971248804349	2	529.3052978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTLDWAKPK_	ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232319904-232323320:-|nuORF	54.776311868738084	0.25715957988447635	4				NaN	NaN	0	NaN	8433	3340	11772
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11776	31.271	NaN	3001.8	30	0	470.2	0.035			+	-1	CPTSSHWM	8	63	511.1981563160502	1020.3817596989004	2	511.1976318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_C(Carbamidomethyl (C))PTSSHWM(Oxidation (M))_	REV__ENST00000510593.5_1_1:179335127-179339162:+|nuORF	29.841539824830324	0.7289191502596711	4				NaN	NaN	0	NaN	8434	3340	11772
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11792	31.304	NaN	6358	30	0	1774.3	0.143	+			9209	EGRTETTVT	9	64	497.24612317974055	992.4776934262811	2	497.2455749511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EGRTETTVT_	ENSG00000143575|ENST00000328703|HAX1;ENST00000459914.1_1_1:154247547-154248174:+|nuORF;nc|ENSG00000143575|O00165-2|HAX1;nc|ENSG00000143575|O00165-3|HAX1;nc|ENSG00000143575|O00165-5|HAX1	47.95952297671804	0.32689736945648856	4				NaN	NaN	0	NaN	8447	3343	11791
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11810	31.343	NaN	6953.5	30	0	677.32	0.214			+	19501	KATRATFPVT	10	76	546.3137995287616	1090.613046124323	2	546.3140258789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KATRATFPVT_	REV__nc|ENSG00000157827|Q96PY5|FMNL2	72.87924865735499	0.25379688738724415	4				NaN	NaN	0	NaN	8462	3346	11809
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11811	31.346	NaN	12640	30	0	1030.8	0.106	+			20914	KITQELSDLQQ	11	82	651.8485971067901	NaN	0	651.8485107421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KITQELSDLQQ_	CDK5RAP2|p.E454Kfs*11|2|0.31|ENSG00000136861|chr9:120491430-120491433|TCTT/-|frameshift_variant;CDK5RAP2|p.L1409*|1|0.2|ENSG00000136861|chr9:120415111-120415111|A/-|frameshift_variant;CDK5RAP2|p.N746Kfs*10|1|0.2|ENSG00000136861|chr9:120458587-120458588|-/T|frameshift_variant;CDK5RAP2|p.P1012Lfs*62|1|0.27|ENSG00000136861|chr9:120443733-120443733|G/-|frameshift_variant;ENSG00000136861|ENST00000349780|CDK5RAP2;ENST00000483412.5_1_9:123170580-123298708:-|nuORF;nc|ENSG00000136861|Q96SN8-2|CDK5RAP2;nc|ENSG00000136861|Q96SN8-3|CDK5RAP2;nc|ENSG00000136861|Q96SN8-4|CDK5RAP2	82.7504851949679	0.06877058779918643	4				NaN	NaN	0	NaN	8463	3346	11809
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11812	31.348	NaN	4370.2	30	0	1814.8	0.106			+	5894	AVLAPKKA	8	58	399.2655707591233	796.5165885850466	2	399.26568603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVLAPKKA_	REV__ENSG00000104529|ENST00000618139|EEF1D;REV__ENSG00000114942|ENST00000392222|EEF1B2;REV__ENST00000526786.5_1_8:144662606-144679251:-|nuORF;REV__nc|ENSG00000104529|P29692-3|EEF1D;REV__nc|ENSG00000104529|P29692-4|EEF1D;REV__nc|ENSG00000104529|P29692|EEF1D	29.841539824830324	0.7289191502596711	4				NaN	NaN	0	NaN	8464	3346	11809
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11813	31.35	NaN	5142.1	30	0	586.42	0.106			+	51206	YPQNQPDKL	9	69	551.7801898109859	1101.5458266887717	2	551.7801513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YPQNQPDKL_	REV__ENSG00000165185|ENST00000337530|KIAA1958;REV__nc|ENSG00000165185|Q8N8K9-3|KIAA1958	70.8162118820467	0.13725933411854815	4				NaN	NaN	0	NaN	8465	3346	11809
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11814	31.352	NaN	7385.3	30	0	1142	0.106	+			26986	LYMKNGQGF	9	71	529.2606853408091	1056.5068177484181	2	529.260986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LYMKNGQGF_	ENSG00000116473|ENST00000369709|RAP1A;ENSG00000127314|ENST00000250559|RAP1B;ENST00000494982.1_1_1:112233982-112249293:+|nuORF;nc|ENSG00000127314|P61224-3|RAP1B;nc|ENSG00000127314|P61224-4|RAP1B;nc|ENSG00000254893|A6NIZ1|RAP1BL	97.47269410471826	0.04379738608259218	4				NaN	NaN	0	NaN	8466	3346	11809
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11815	31.354	NaN	4939.4	30	0	687.17	0.038	+			51555	YYEEQHPEL	9	72	604.2668215382164	1206.5190901432327	2	604.2673950195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YYEEQHPEL_	ENSG00000008517|ENST00000525643|IL32;nc|ENSG00000008517|P24001-3|IL32;nc|ENSG00000008517|P24001-4|IL32;nc|ENSG00000008517|P24001-5|IL32;nc|ENSG00000008517|P24001-6|IL32;nc|ENSG00000008517|P24001|IL32	67.49366992349736	0.1516260258713357	4				NaN	NaN	0	NaN	8467	3346	11809
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11833	31.392	NaN	14397	30	0	2316.9	0.214	+			13775	GQGTFTKIFK	10	80	563.8165448183435	1125.6185367034868	2	563.816650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GQGTFTKIFK_	ENSG00000096968|ENST00000381652|JAK2	118.23318122614258	0.029825105341188273	4				NaN	NaN	0	NaN	8482	3349	11832
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11834	31.396	NaN	15198	30	0	3472.1	0.106	+			49631	VYIDRVRSL	9	88	560.8275088527004	1119.6404647722006	2	560.82763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYIDRVRSL_	ENSG00000160789|ENST00000368300|LMNA;nc|ENSG00000160789|P02545-2|LMNA;nc|ENSG00000160789|P02545-3|LMNA;nc|ENSG00000160789|P02545-6|LMNA	79.71258880314673	0.09879134589249085	4				NaN	NaN	0	NaN	8483	3349	11832
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11835	31.398	NaN	7223.2	30	0	1400.3	0.106			+	-1	QGEGAGCLLY	10	60	534.2450569275074	1066.4755609218148	2	534.245361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_QGEGAGC(Carbamidomethyl (C))LLY_	REV__ENST00000465640.1_1_X:153670288-153671016:+|nuORF	42.396135135203025	0.5270658956260207	4				NaN	NaN	0	NaN	8484	3349	11832
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11836	31.4	NaN	3906.8	30	0	477.82	0.106	+			46122	VDIVMNHHL	9	63	539.2795869430225	1076.544620952845	2	539.2793579101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VDIVMNHHL_	ENSG00000133112|ENST00000530705|TPT1;ENST00000533567.5_1_13:45912892-45914385:-|nuORF;nc|ENSG00000133112|P13693-2|TPT1	90.60085204095205	0.06317133949006545	4				NaN	NaN	0	NaN	8485	3349	11832
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11837	31.402	NaN	2642.4	30	0	870.35	0.106			+	3464	ASRYCLVW	8	68	333.16950645572405	NaN	0	333.16937255859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASRYCLVW_	REV__ENST00000488581.5_1_2:172944999-172945131:+|nuORF	20.481830146152948	1.741893751539848	4				NaN	NaN	0	NaN	8486	3349	11832
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11838	31.403	NaN	3468.4	30	0	372.53	0.037				-1	TYMGHTGAVW	10	65	569.7530928745251	1137.4916328158502	2	569.75341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_TYM(Oxidation (M))GHTGAVW_	ENSG00000084623|ENST00000677711|EIF3I;ENST00000474371.1_1_1:32688150-32694122:+|nuORF;ENST00000489353.5_1_1:32688042-32691823:+|nuORF	45.9519527083369	0.4943008177357963	4				NaN	NaN	0	NaN	8487	3349	11832
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11851	31.431	NaN	9114.2	30	0	1034.8	0.214	+			19432	KAPVTVTSL	9	78	458.2791996418262	914.5438463504524	2	458.27886962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAPVTVTSL_	ENSG00000172534|ENST00000310441|HCFC1;HCFC1|p.L913Wfs*11|1|0.39|ENSG00000172534|chrX:153956309-153956309|A/-|frameshift_variant;HCFC1|p.P1894Lfs*22|1|0.06|ENSG00000172534|chrX:153950835-153950835|G/-|frameshift_variant;nc|ENSG00000172534|P51610-2|HCFC1;nc|ENSG00000172534|P51610-4|HCFC1	118.74307786436346	0.02196067127630568	4				NaN	NaN	0	NaN	8497	3352	11850
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11852	31.435	NaN	3248.2	30	0	255.57	0.106	+			12789	GELTGEVRM	9	66	496.2474947435364	990.4804365538728	2	496.2470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GELTGEVRM_	ENSG00000128591|ENST00000325888|FLNC;FLNC|p.H2471Tfs*58|1|0.18|ENSG00000128591|chr7:128856767-128856767|C/-|frameshift_variant;FLNC|p.V1896Wfs*57|1|0.04|ENSG00000128591|chr7:128851472-128851472|G/-|frameshift_variant;nc|ENSG00000128591|Q14315-2|FLNC	70.8162118820467	0.13725933411854815	4				NaN	NaN	0	NaN	8498	3352	11850
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11853	31.437	NaN	4986.2	30	0	1647.5	0.106	+			12984	GETSTDLKL	9	62	482.2534020279155	962.492251122631	2	482.25311279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GETSTDLKL_	ENSG00000144028|ENST00000323853|SNRNP200;ENST00000480242.1_1_2:96950056-96950410:-|nuORF;ENST00000497539.5_1_2:96940752-96950410:-|nuORF	87.69643885390035	0.07135982304947239	4				NaN	NaN	0	NaN	8499	3352	11850
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11854	31.439	NaN	5033.5	30	0	1356.9	0.106			+	11422	FLSQVMSKL	9	76	526.7959202616381	1051.5772875900761	2	526.796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FLSQVMSKL_	REV__ENSG00000197658|ENST00000612278|SLC22A24;REV__nc|ENSG00000197658|Q8N4F4-1|SLC22A24;REV__nc|ENSG00000197658|Q8N4F4-3|SLC22A24;REV__SLC22A24|p.H495Pfs*31|1|0.32|ENSG00000197658|chr11:63081034-63081035|-/G|frameshift_variant	47.95952297671804	0.32689736945648856	4				NaN	NaN	0	NaN	8500	3352	11850
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11855	31.44	NaN	3025.5	30	0	277.52	0.106	+			36005	SEIDQINKV	9	60	523.2798098963333	NaN	0	523.280029296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SEIDQINKV_	ENSG00000008128|ENST00000404249|CDK11A;ENSG00000248333|ENST00000341832|CDK11B;ENST00000356937.7_1_1:1634348-1635645:-|nuORF;ENST00000463652.5_1_1:1635130-1635691:-|nuORF;nc|ENSG00000008128|Q9UQ88-10|CDK11A;nc|ENSG00000008128|Q9UQ88-3|CDK11A;nc|ENSG00000008128|Q9UQ88-4|CDK11A;nc|ENSG00000008128|Q9UQ88-5|CDK11A;nc|ENSG00000008128|Q9UQ88|CDK11A;nc|ENSG00000248333|P21127-10|CDK11B;nc|ENSG00000248333|P21127-12|CDK11B;nc|ENSG00000248333|P21127-3|CDK11B;nc|ENSG00000248333|P21127-4|CDK11B;nc|ENSG00000248333|P21127-5|CDK11B;nc|ENSG00000248333|P21127-6|CDK11B;nc|ENSG00000248333|P21127-8|CDK11B;nc|ENSG00000248333|P21127-9|CDK11B;nc|ENSG00000248333|P21127|CDK11B	53.08895987439943	0.18540527177656715	4				NaN	NaN	0	NaN	8501	3352	11850
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11856	31.442	NaN	3778.4	30	0	375.82	0.106	+			4460	ATINNPNLLTK	11	72	599.8430716123921	1197.6715902915842	2	599.8435668945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATINNPNLLTK_	DDX60L|p.A1208Vfs*33|1|0.16|ENSG00000181381|chr4:168395993-168395994|-/CTTTGACA|frameshift_variant;DDX60L|p.F1291Lfs*11|1|0.38|ENSG00000181381|chr4:168391582-168391582|A/-|frameshift_variant;DDX60L|p.N1040Kfs*4|1|0.03|ENSG00000181381|chr4:168406043-168406044|-/AT|frameshift_variant;DDX60L|p.N1168Tfs*25|2|0.3|ENSG00000181381|chr4:168396113-168396113|T/-|frameshift_variant;DDX60L|p.N1642Mfs*9|1|0.2|ENSG00000181381|chr4:168371615-168371615|T/-|frameshift_variant;DDX60L|p.R1122Efs*29|1|0.05|ENSG00000181381|chr4:168400953-168400953|T/-|frameshift_variant;ENSG00000181381|ENST00000682922|DDX60L;nc|ENSG00000181381|Q5H9U9-2|DDX60L	52.167168403610894	0.39337392184041037	4				NaN	NaN	0	NaN	8502	3352	11850
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11857	31.444	NaN	5367.5	30	0	509.44	0.039				-1	DWRDDFPACT	10	65	641.7616255958949	1281.5086982585897	2	641.76025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_DWRDDFPAC(Carbamidomethyl (C))T_	ENSG00000165899|ENST00000547103|OTOGL;OTOGL|p.C2147Mfs*2|1|0.4|ENSG00000165899|chr12:80367723-80367724|-/A|frameshift_variant;OTOGL|p.K2146Nfs*40|2|0.16|ENSG00000165899|chr12:80367724-80367724|A/-|frameshift_variant	29.170058357718403	0.6416167986984785	4				NaN	NaN	0	NaN	8503	3352	11850
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11875	31.481	NaN	11933	30	0	3361	0.214	+			23276	KYLEETNSL	9	72	548.7798693081417	1095.5451856830832	2	548.7798461914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KYLEETNSL_	ENSG00000198945|ENST00000361794|L3MBTL3;L3MBTL3|p.M479*|1|0.26|ENSG00000198945|chr6:130086161-130086161|A/-|frameshift_variant;nc|ENSG00000198945|Q96JM7-2|L3MBTL3	117.5257442709337	0.022697614825424036	4				NaN	NaN	0	NaN	8518	3355	11874
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11876	31.484	NaN	6532.8	30	0	838.8	0.106	+			11428	FLTHMFCTF	9	85	382.8404448390393	NaN	0	382.8405456542969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FLTHMFCTF_	ENSG00000065675|ENST00000263125|PRKCQ;nc|ENSG00000065675|Q04759-2|PRKCQ;nc|ENSG00000065675|Q04759-3|PRKCQ	47.657333605630114	0.2228375344433429	4				NaN	NaN	0	NaN	8519	3355	11874
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11877	31.486	NaN	4787.4	30	0	812.3	0.106	+			14547	GTEFGGSIYQK	11	65	593.790570285602	1185.566587638004	2	593.7908935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTEFGGSIYQK_	ENSG00000078668|ENST00000022615|VDAC3;ENSG00000165637|ENST00000332211|VDAC2;ENSG00000213585|ENST00000265333|VDAC1;ENST00000489906.5_1_5:133308464-133311792:-|nuORF;nc|ENSG00000078668|Q9Y277-2|VDAC3;nc|ENSG00000165637|P45880-1|VDAC2;nc|ENSG00000165637|P45880-2|VDAC2	56.632244143249146	0.3535169766007185	4				NaN	NaN	0	NaN	8520	3355	11874
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11878	31.488	NaN	3222.5	30	0	483.68	0.106				-1	MNMQQKSVY	9	56	572.758921630678	1143.5032903281558	2	572.7587280273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_M(Oxidation (M))NMQQKSVY_	ABCA6|p.K4Q|1|0.33|ENSG00000154262|chr17:69140694-69140694|T/G|missense_variant	40.77816245573522	0.41113185337114944	4				NaN	NaN	0	NaN	8521	3355	11874
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11879	31.49	NaN	3616.5	30	0	573.32	0.039				-1	EFLTCPLVVSR	11	65	660.852857059122	1319.691161185044	2	660.8524169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_EFLTC(Carbamidomethyl (C))PLVVSR_	ENST00000333646.10_2_X:70338413-70338623:+|nuORF	23.52269567125451	0.7430573033454468	4				NaN	NaN	0	NaN	8522	3355	11874
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11894	31.521	NaN	17037	30	0	1789.5	0.214	+			34789	RYLEGTSCI	9	74	549.7661074051051	1097.5176618770101	2	549.7662353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_RYLEGTSC(Carbamidomethyl (C))I_	ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1	82.7504851949679	0.08565546331141553	4				NaN	NaN	0	NaN	8534	3358	11893
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11895	31.524	NaN	4543.1	30	0	365.63	0.106				-1	 	0	66	494.26034652696933	493.25307006036934	1	494.25921630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8535	3358	11893
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11896	31.526	NaN	3607.3	30	0	419.18	0.106	+			10317	ETRPSAAQL	9	63	486.7593478344164	971.5041427356329	2	486.7588806152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ETRPSAAQL_	ENSG00000072786|ENST00000176763|STK10;ENST00000517527.1_1_5:171532629-171533799:-|nuORF;STK10|p.T526Pfs*15|3|0.11|ENSG00000072786|chr5:172090341-172090341|T/-|frameshift_variant	36.446750945000026	0.4619375763483977	4				NaN	NaN	0	NaN	8536	3358	11893
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11897	31.528	NaN	4433.1	30	0	684.55	0.038	+			28881	NQEKHFYTF	9	73	607.2852252327936	1212.555897532387	2	607.2879028320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NQEKHFYTF_	DIS3|p.F775Lfs*30|1|0.43|ENSG00000083520|chr13:72761940-72761940|A/-|frameshift_variant;ENSG00000083520|ENST00000377767|DIS3	43.650786325866115	0.37743712540499297	4				NaN	NaN	0	NaN	8537	3358	11893
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11915	31.565	NaN	19798	30	0	2837.8	0.214	+			35409	SAQSFFENK	9	78	529.2517292706032	1056.4889056080062	2	529.25146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAQSFFENK_	ENSG00000136758|ENST00000376016|YME1L1;nc|ENSG00000136758|Q96TA2-3|YME1L1;nc|ENSG00000136758|Q96TA2|YME1L1;YME1L1|p.N311Tfs*18|1|0.26|ENSG00000136758|chr10:27134053-27134053|T/-|frameshift_variant	166.0711670676379	0.003437550387609957	4				NaN	NaN	0	NaN	8552	3361	11914
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11916	31.569	NaN	4037.7	30	0	975.38	0.106	+			10385	EVCIHPDG	8	57	435.19497417985906	868.3753954265181	2	435.1950988769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EVCIHPDG_	ENSG00000213619|ENST00000263774|NDUFS3;ENST00000533507.5_1_11:47602194-47606030:+|nuORF;nc|ENSG00000213619|O75489-2|NDUFS3	28.2542754592877	0.7411748056684583	4				NaN	NaN	0	NaN	8553	3361	11914
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11917	31.571	NaN	4097.4	30	0	771.67	0.106	+			37615	SLPTHDPSPL	10	71	532.2748389413117	1062.5351249494233	2	532.274658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLPTHDPSPL_	ENSG00000141736|ENST00000269571|ERBB2;nc|ENSG00000141736|P04626-2|ERBB2;nc|ENSG00000141736|P04626-3|ERBB2;nc|ENSG00000141736|P04626-4|ERBB2;nc|ENSG00000141736|P04626-5|ERBB2	49.44154591367651	0.46214596422418036	4				NaN	NaN	0	NaN	8554	3361	11914
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11918	31.573	NaN	4357.9	30	0	950.17	0.106	+			50496	YALRSLRIE	9	72	560.8275088527004	1119.6404647722006	2	561.2660522460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YALRSLRIE_	ENSG00000090857|ENST00000288050|PDPR;nc|ENSG00000090857|Q8NCN5-2|PDPR;PDPR|p.E826Kfs*5|1|0.12|ENSG00000090857|chr16:70156711-70156711|G/-|frameshift_variant	26.69291269510374	0.5537881896960711	4				NaN	NaN	0	NaN	8555	3361	11914
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11919	31.574	NaN	5030.2	30	0	730.47	0.106	+			20633	KGGHAGWAVML	11	69	563.7942708523575	1125.573988771515	2	563.7941284179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KGGHAGWAVML_	ENST00000377710.9_1_20:17970970-17971042:+|nuORF	53.351449002276354	0.38280258784255455	4				NaN	NaN	0	NaN	8556	3361	11914
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11920	31.576	NaN	3915.7	30	0	422.51	0.035			+	-1	SGVCAGRQGR	10	69	524.2592537679515	1046.5039546027028	2	525.2584838867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_SGVC(Carbamidomethyl (C))AGRQGR_	REV__ENST00000321264.8_1_2:242707521-242708037:+|nuORF	29.14955571784316	0.6417842315402807	4				NaN	NaN	0	NaN	8557	3361	11914
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11921	31.577	NaN	4488.4	30	0	778.32	0.143	+			29313	NYNNQSSNFGP	11	72	621.2628834918074	NaN	0	621.2628784179688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NYNNQSSNFGP_	chr12:54282662-54282800|482|460.96|0.0|25.46|+|ENST00000677249|HNRNPA1,HNRNPA1;ENSG00000135486|ENST00000340913|HNRNPA1;ENSG00000139675|ENST00000357495|HNRNPA1L2;ENSG00000224578|ENST00000565308|HNRNPA1L3;ENST00000411857.2_1_1:179425361-179425934:-|nuORF;ENST00000432375.1_1_6:32293532-32293889:+|nuORF;nc|ENSG00000135486|P09651-2|HNRNPA1;nc|ENSG00000135486|P09651-3|HNRNPA1	59.93077597824379	0.23351441018439056	4				NaN	NaN	0	NaN	8558	3361	11914
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11939	31.615	NaN	8656.3	30	0	808.38	0.214	+			37072	SISDKFFQK	9	74	550.2933101615583	1098.5720673899166	2	550.29296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SISDKFFQK_	ENSG00000089472|ENST00000343002|HEPH;HEPH|p.R1086Qfs*4|1|0.29|ENSG00000089472|chrX:66266444-66266445|-/C|frameshift_variant;nc|ENSG00000089472|Q9BQS7-2|HEPH;nc|ENSG00000089472|Q9BQS7-3|HEPH;nc|ENSG00000089472|Q9BQS7-4|HEPH	112.41091882917199	0.026537921851008135	4				NaN	NaN	0	NaN	8573	3364	11938
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11940	31.619	NaN	3436.4	30	0	337.24	0.106			+	-1	IVAMLAICV	9	68	495.2796180822952	988.5446832313904	2	495.27911376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_IVAMLAIC(Carbamidomethyl (C))V_	REV__ENSG00000204070|ENST00000243918|SYS1;REV__ENST00000457307.1_1_20:43994210-43995752:+|nuORF	49.21078951299608	0.3122205139198386	4				NaN	NaN	0	NaN	8574	3364	11938
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11941	31.621	NaN	3691.3	30	0	331.88	0.106				-1	RCSDCGLN	8	43	462.6868354487468	923.3591179642937	2	462.68719482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_RCSDC(Carbamidomethyl (C))GLN_	CHN2|p.P439Lfs*6|1|0.18|ENSG00000106069|chr7:29512640-29512640|C/-|frameshift_variant;ENSG00000106069|ENST00000222792|CHN2;nc|ENSG00000106069|P52757-3|CHN2;nc|ENSG00000106069|P52757-4|CHN2;nc|ENSG00000106069|P52757-6|CHN2;nc|ENSG00000106069|P52757-7|CHN2;nc|ENSG00000106069|P52757-8|CHN2;nc|ENSG00000106069|P52757-9|CHN2	30.503639358989545	0.7238069182250283	4				NaN	NaN	0	NaN	8575	3364	11938
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11942	31.623	NaN	3618.6	30	0	554	0.106	+			33648	RMMMQLKEL	9	68	590.3061972469392	1178.5978415606783	2	590.3057250976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RMMMQLKEL_	ENST00000325083.12_1_8:17815084-17817658:+|nuORF	64.20726635412375	0.17854274437659667	4				NaN	NaN	0	NaN	8576	3364	11938
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11943	31.625	NaN	2372.4	30	0	283.93	0.106				-1	 	0	69	383.6870626192531	765.3595723053062	2	383.6871643066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8577	3364	11938
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11944	31.626	NaN	3000.3	30	0	306.73	0.035	+			49766	VYQGHTALL	9	64	501.27455731187496	1000.5345616905499	2	501.2745666503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VYQGHTALL_	ENSG00000112655|ENST00000230419|PTK7;nc|ENSG00000112655|Q13308-2|PTK7;nc|ENSG00000112655|Q13308-3|PTK7;nc|ENSG00000112655|Q13308-4|PTK7;nc|ENSG00000112655|Q13308-5|PTK7;nc|ENSG00000112655|Q13308-6|PTK7;PTK7|p.D618Gfs*36|1|0.42|ENSG00000112655|chr6:43142009-43142010|-/G|frameshift_variant	90.77665401227738	0.06267569666681755	4				NaN	NaN	0	NaN	8578	3364	11938
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11945	31.627	NaN	3490	30	0	461.35	0.143				-1	 	0	83	336.5341068044087	1006.5804910134261	3	336.53436279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8579	3364	11938
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11962	31.662	NaN	4400.4	30	0	642.99	0.214				-1	IFSEHSCL	8	69	496.7288035035684	NaN	0	496.7288513183594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_IFSEHSC(Carbamidomethyl (C))L_	ENSG00000197961|ENST00000320451|ZNF121	60.29395666154354	1.7418937515398478	4				NaN	NaN	0	NaN	8593	3367	11961
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11963	31.665	NaN	6364.7	30	0	830.43	0.106				-1	SLSSSLFCHC	10	58	599.2535178004035	1196.492482667607	2	599.2537841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_SLSSSLFC(Carbamidomethyl (C))HC(Carbamidomethyl (C))_	ENST00000517458.1_1_8:127565648-127568649:-|nuORF	19.996771675451527	0.7148376616046445	4				NaN	NaN	0	NaN	8594	3367	11961
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11964	31.667	NaN	5033.2	30	0	937.91	0.106			+	24688	LHAPDDAEQK	10	63	562.2722545012094	1122.5299560692188	2	562.2720336914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LHAPDDAEQK_	REV__nc|ENSG00000148143|Q96JM2-2|ZNF462	49.44154591367651	0.46214596422418036	4				NaN	NaN	0	NaN	8595	3367	11961
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11965	31.669	NaN	3576.3	30	0	352.95	0.106			+	25144	LLSGEVVSYRF	11	78	423.89940136598716	1268.6763746981615	3	423.89959716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LLSGEVVSYRF_	REV__CNTN4|p.G935Dfs*35|1|0.41|ENSG00000144619|chr3:3043692-3043692|A/-|frameshift_variant;REV__CNTN4|p.P504Lfs*18|4|0.33|ENSG00000144619|chr3:3026122-3026122|C/-|frameshift_variant;REV__ENSG00000144619|ENST00000418658|CNTN4;REV__ENST00000430505.6_1_3:2613181-3079017:+|nuORF;REV__ENST00000438282.6_1_3:2613181-3030164:+|nuORF	38.714083909724	0.5755383074156426	4				NaN	NaN	0	NaN	8596	3367	11961
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11966	31.671	NaN	5077.5	30	0	689.81	0.106	+			1039	AEKLYKNIL	9	81	364.55335957871614	1090.6382493363485	3	364.5535888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEKLYKNIL_	ENSG00000198730|ENST00000361367|CTR9	72.87924865735499	0.12833875048249987	4				NaN	NaN	0	NaN	8597	3367	11961
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11967	31.673	NaN	5222.3	30	0	849.5	0.106	+			11121	FFTHFSSL	8	67	493.24260319436024	984.4706534555205	2	493.2422790527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FFTHFSSL_	ANO9|p.D688Ifs*44|1|0.15|ENSG00000185101|chr11:418789-418789|G/-|frameshift_variant;ENSG00000185101|ENST00000332826|ANO9;ENST00000526142.5_1_11:419653-429752:-|nuORF;ENST00000528927.5_1_11:418373-431830:-|nuORF;ENST00000532094.5_1_11:420655-431830:-|nuORF;ENST00000534161.5_1_11:418373-429524:-|nuORF;nc|ENSG00000185101|A1A5B4-2|ANO9	71.37791200682192	0.3954169775488141	4				NaN	NaN	0	NaN	8598	3367	11961
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11968	31.675	NaN	5436.1	30	0	500.9	0.034	+			4903	ATQILSVPK	9	76	478.7925626330913	955.5705723329826	2	478.7924499511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATQILSVPK_	nc|ENSG00000120802|P42166|TMPO	120.30596017624542	0.02101454110788768	4				NaN	NaN	0	NaN	8599	3367	11961
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11986	31.712	NaN	14998	30	0	1260.3	0.214	+			10637	EYNTVASKF	9	81	529.7611535418183	1057.5077541504365	2	529.7614135742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EYNTVASKF_	ENSG00000173193|ENST00000474629|PARP14;ENST00000475640.1_1_3:122437249-122439770:+|nuORF;nc|ENSG00000173193|Q460N5-1|PARP14;nc|ENSG00000173193|Q460N5-3|PARP14;nc|ENSG00000173193|Q460N5-4|PARP14;nc|ENSG00000173193|Q460N5-5|PARP14	168.25843898104137	0.0030641937004078144	4				NaN	NaN	0	NaN	8614	3370	11985
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11987	31.715	NaN	18792	30	0	3252.1	0.106				-1	 	0	84	350.20666051040814	698.3987680876163	2	350.20672607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8615	3370	11985
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11988	31.718	NaN	4479	30	0	996.43	0.106	+			44349	TSGVHTFPAVL	11	67	564.8047329248175	NaN	0	564.8047485351562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TSGVHTFPAVL_	nc|ENSG00000211892|P01861-1|IGHG4;nc|ENSG00000211892|P01861|IGHG4;nc|ENSG00000211893|P01859-1|IGHG2;nc|ENSG00000211893|P01859|IGHG2;nc|ENSG00000211896|P01857-1|IGHG1;nc|ENSG00000211896|P01857|IGHG1;nc|ENSG00000211897|P01860-1|IGHG3;nc|ENSG00000211897|P01860|IGHG3	37.81151784470057	0.3969060959064013	4				NaN	NaN	0	NaN	8616	3370	11985
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11989	31.719	NaN	3396.1	30	0	203.26	0.106			+	26114	LSPARGTKVY	10	71	546.3137995287616	1090.613046124323	2	546.3148803710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSPARGTKVY_	REV__nc|ENSG00000214881|A8MWL7|TMEM14DP	49.44154591367651	0.46214596422418036	4				NaN	NaN	0	NaN	8617	3370	11985
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11990	31.721	NaN	3310.8	30	0	494.97	0.106	+			19151	IYPKIGDKL	9	65	523.8165132857035	NaN	0	523.8167724609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IYPKIGDKL_	EFNB1|p.G291Afs*30|1|0.41|ENSG00000090776|chrX:68840480-68840480|G/-|frameshift_variant;EFNB1|p.S236Cfs*80|1|0.38|ENSG00000090776|chrX:68840320-68840327|CCAAGGTG/-|frameshift_variant;ENSG00000090776|ENST00000204961|EFNB1	66.42927471994793	0.121898005645852	4				NaN	NaN	0	NaN	8618	3370	11985
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11991	31.723	NaN	2792	30	0	351.42	0.038			+	-1	RGGIYYDGCMA	11	51	611.256591796875	NaN	0	611.256591796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_RGGIYYDGCM(Oxidation (M))A_	REV__ENSG00000145715|ENST00000274376|RASA1;REV__nc|ENSG00000145715|P20936-2|RASA1;REV__nc|ENSG00000145715|P20936-3|RASA1;REV__nc|ENSG00000145715|P20936-4|RASA1;REV__RASA1|p.N838Mfs*4|2|0.36|ENSG00000145715|chr5:87379754-87379754|A/-|frameshift_variant;REV__RASA1|p.V643Gfs*4|1|0.04|ENSG00000145715|chr5:87374313-87374314|-/GGCT|frameshift_variant;REV__RASA1|p.V643Mfs*15|1|0.04|ENSG00000145715|chr5:87374311-87374312|-/TA|frameshift_variant	19.996771675451527	0.456735970842152	4				NaN	NaN	0	NaN	8619	3370	11985
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	11992	31.724	NaN	7519.5	30	0	991.57	0.142				-1	QVHRRMNSL	9	91	578.8040757612507	1155.5935985893013	2	578.8046264648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_QVHRRM(Oxidation (M))NSL_	ENSG00000182771|ENST00000327946|GRID1;nc|ENSG00000182771|Q9ULK0-2|GRID1	37.81151784470057	0.4459294069877048	4				NaN	NaN	0	NaN	8620	3370	11985
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12008	31.759	NaN	23600	30	0	3690.5	0.214	+			48553	VTNWDDMEK	9	92	569.247986954429	1136.481420975658	2	569.2482299804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTNWDDMEK_	ACTB|p.I85T|1|0.1|ENSG00000075624|chr7:5529270-5529270|A/G|missense_variant;ENSG00000075624|ENST00000646664|ACTB;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENST00000436287.1_1_1:224052226-224052508:-|nuORF;ENST00000457622.1_1_6:46172676-46173294:+|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000502306.1_1_5:15450853-15451165:+|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF	139.38205640894643	0.01076996779551382	4				NaN	NaN	0	NaN	8633	3373	12007
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12009	31.762	NaN	15138	30	0	1794.8	0.106	+			22870	KVLDAIIQEK	10	94	578.8504214641131	1155.686289995026	2	578.8499145507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVLDAIIQEK_	ENSG00000113810|ENST00000357388|SMC4;ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4;SMC4|p.K628Nfs*23|1|0.11|ENSG00000113810|chr3:160420762-160420762|A/-|frameshift_variant	77.28774426308219	0.21777985819004636	4				NaN	NaN	0	NaN	8634	3373	12007
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12010	31.764	NaN	5791	30	0	1376.6	0.106	+			1330	AETILKNNI	9	65	508.29296639159236	1014.5713798499847	2	508.29290771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AETILKNNI_	ENSG00000124214|ENST00000371856|STAU1;nc|ENSG00000124214|O95793-2|STAU1;nc|ENSG00000124214|O95793-3|STAU1	136.26810882979174	0.012230845423532208	4				NaN	NaN	0	NaN	8635	3373	12007
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12011	31.766	NaN	2334.8	30	0	311.41	0.106	+			20413	KETLPPPAAPP	11	65	559.317632696725	1116.62071246025	2	559.317626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KETLPPPAAPP_	ENSG00000173166|ENST00000319170|RAPH1;RAPH1|p.K1026Qfs*47|1|0.27|ENSG00000173166|chr2:203440114-203440115|-/G|frameshift_variant	34.172542307311794	0.6313490974540716	4				NaN	NaN	0	NaN	8636	3373	12007
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12012	31.768	NaN	5441.9	30	0	912.71	0.106			+	9996	ERLHVTKYHVR	11	65	719.4050092022703	NaN	0	719.404296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ERLHVTKYHVR_	REV__ENSG00000173068|ENST00000380672|BNC2;REV__ENST00000418777.5_1_9:16418989-16435690:-|nuORF	22.579656572578934	0.456735970842152	4				NaN	NaN	0	NaN	8637	3373	12007
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12013	31.77	NaN	2166.9	30	0	210.17	0.035			+	-1	ANRMESNR	8	60	497.22980440128447	992.445055869369	2	497.2272644042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_ANRM(Oxidation (M))ESNR_	REV__ENSG00000221840|ENST00000319760|OR4A5;REV__nc|ENSG00000225997|P0C604|OR4A8	35.61828744233558	0.6843154725607303	4				NaN	NaN	0	NaN	8638	3373	12007
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12029	31.803	NaN	21107	30	0	3376.3	0.214	+			35235	SALEHSIQY	9	75	524.2592537679515	1046.5039546027028	2	524.2590942382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SALEHSIQY_	ENSG00000121691|ENST00000241052|CAT;ENST00000525707.1_1_11:34482779-34490041:+|nuORF	90.36981228632155	0.0638227155548745	4				NaN	NaN	0	NaN	8651	3376	12028
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12030	31.806	NaN	7307	30	0	697.25	0.106	+			18622	ISSSFIFKQ	9	75	528.7899628231656	1055.5653727131312	2	528.7899780273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ISSSFIFKQ_	ENST00000457976.1_1_9:93881489-93881789:-|nuORF	74.25504064058377	0.12238981753128622	4				NaN	NaN	0	NaN	8652	3376	12028
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12031	31.809	NaN	6793.8	30	0	734.89	0.106	+			195	AALDWVTKK	9	82	516.2983694639952	1030.5821859947903	2	516.2978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AALDWVTKK_	ENSG00000227057|ENST00000374617|WDR46;ENST00000488944.5_1_6:33255341-33255794:-|nuORF	85.86182877749512	0.07653218437724067	4				NaN	NaN	0	NaN	8653	3376	12028
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12032	31.81	NaN	4264.1	30	0	497.71	0.106				-1	 	0	68	386.2383678474395	385.23109138083953	1	386.23712158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8654	3376	12028
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12033	31.812	NaN	4504.8	30	0	543.5	0.106	+			6067	AVMRFLTQR	9	71	561.3162580851211	1120.6179632370422	2	561.31591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVMRFLTQR_	AOC2|p.N533Tfs*4|1|0.08|ENSG00000131480|chr17:42849091-42849091|A/-|frameshift_variant;AOC2|p.P115Hfs*20|1|0.27|ENSG00000131480|chr17:42844965-42844965|C/-|frameshift_variant;AOC2|p.Q309Pfs*27|1|0.41|ENSG00000131480|chr17:42845549-42845567|TTCAGTTCTCGCCCCAGGG/-|frameshift_variant;AOC3|p.R585Sfs*60|1|0.28|ENSG00000131471|chr17:42854594-42854595|-/C|frameshift_variant;AOC3|p.T657Lfs*22|1|0.15|ENSG00000131471|chr17:42855521-42855521|C/-|frameshift_variant;ENSG00000131471|ENST00000308423|AOC3;ENSG00000131480|ENST00000253799|AOC2;nc|ENSG00000131471|Q16853-2|AOC3;nc|ENSG00000131480|O75106-2|AOC2	52.936696900407355	0.27249468807391813	4				NaN	NaN	0	NaN	8655	3376	12028
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12034	31.814	NaN	7816.8	30	0	3351	0.038				-1	KKDFPVMGAGL	11	80	393.5460692814712	1177.6163784446137	3	393.5461120605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_KKDFPVM(Oxidation (M))GAGL_	ALS2CL|p.L328M|1|0.33|ENSG00000178038|chr3:46683257-46683257|G/T|missense_variant	19.262678746197807	0.7802940895261122	4				NaN	NaN	0	NaN	8656	3376	12028
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12035	31.815	NaN	6928.2	30	0	727.94	0.139	+			7798	DPHTVTVSM	9	73	493.734414951398	985.454276969596	2	493.7347412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DPHTVTVSM_	BRD8|p.G620Wfs*10|1|0.17|ENSG00000112983|chr5:138164101-138164102|-/A|frameshift_variant;BRD8|p.P1065Lfs*29|1|0.14|ENSG00000112983|chr5:138149724-138149724|G/-|frameshift_variant;ENSG00000112983|ENST00000254900|BRD8;nc|ENSG00000112983|Q9H0E9-2|BRD8;nc|ENSG00000112983|Q9H0E9-3|BRD8;nc|ENSG00000112983|Q9H0E9-4|BRD8	82.30502934623384	0.08758161712619916	4				NaN	NaN	0	NaN	8657	3376	12028
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12053	31.854	NaN	14268	30	0	1642.4	0.214	+			39732	STISIFHCK	9	87	518.2684361694621	1034.5223194057241	2	518.2687377929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STISIFHCK_	ENST00000554584.5_1_14:64375879-64407376:+|nuORF	139.97047562133406	0.010493916756945389	4				NaN	NaN	0	NaN	8672	3379	12052
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12054	31.857	NaN	8838.9	30	0	1263.8	0.106	+			19162	IYQRDPLKL	9	72	573.3380148525082	1144.6614767718163	2	573.33837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IYQRDPLKL_	ENSG00000166888|ENST00000300134|STAT6;ENST00000555641.1_1_12:57499966-57502061:-|nuORF;STAT6|p.G815Efs*27|3|0.31|ENSG00000166888|chr12:57096672-57096672|C/-|frameshift_variant	72.87924865735499	0.12833875048249987	4				NaN	NaN	0	NaN	8673	3379	12052
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12055	31.86	NaN	8378.2	30	0	2186	0.106	+			43998	TPHSYIDTY	9	68	548.7512657017617	1095.4879784703232	2	548.7516479492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TPHSYIDTY_	ENSG00000182240|ENST00000330333|BACE2;ENST00000491838.5_1_21:42598231-42618026:+|nuORF;nc|ENSG00000182240|Q9Y5Z0-2|BACE2;nc|ENSG00000182240|Q9Y5Z0-3|BACE2;nc|ENSG00000182240|Q9Y5Z0-4|BACE2;nc|ENSG00000182240|Q9Y5Z0-5|BACE2	102.7733458925114	0.03637199559902695	4				NaN	NaN	0	NaN	8674	3379	12052
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12056	31.861	NaN	4406.7	30	0	550.15	0.106	+			6511	AYAPPPHVI	9	58	482.7662577356735	963.517962538147	2	482.7663879394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AYAPPPHVI_	ENSG00000128335|ENST00000358502|APOL2	49.21078951299608	0.3122205139198386	4				NaN	NaN	0	NaN	8675	3379	12052
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12057	31.863	NaN	2971.3	30	0	438.56	0.106	+			39614	STIAILNSVKK	11	59	587.3641483257611	1172.7137437183221	2	587.3641357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STIAILNSVKK_	ENSG00000151503|ENST00000534548|NCAPD3;ENST00000525964.6_1_11:134022841-134052943:-|nuORF	50.79123845855914	0.4102859592092987	4				NaN	NaN	0	NaN	8676	3379	12052
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12058	31.865	NaN	3207.1	30	0	656.21	0.036	+			21472	KNGTTQDRY	9	59	541.765862066894	1081.5171712005879	2	541.7667236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KNGTTQDRY_	ENSG00000102302|ENST00000375135|FGD1;FGD1|p.P859Lfs*4|1|0.34|ENSG00000102302|chrX:54447315-54447315|G/-|frameshift_variant	42.396135135203025	0.392153681582562	4				NaN	NaN	0	NaN	8677	3379	12052
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12059	31.866	NaN	2841.9	30	0	418.78	0.143			+	25125	LLQLRHGPLAP	11	50	607.8717651367188	NaN	0	607.8717651367188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LLQLRHGPLAP_	REV__ENST00000327359.7_1_14:105695225-105781678:-|nuORF;REV__ENST00000379937.6_3_14:105695225-105767012:-|nuORF;REV__ENST00000548421.2_1_14:105722813-105767174:-|nuORF	15.641811463095205	0.456735970842152	4				NaN	NaN	0	NaN	8678	3379	12052
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12077	31.905	NaN	3810.9	30	0	228.69	0.213	+			6612	AYQKQPTIFQ	10	73	612.3245815824173	1222.6346102316345	2	612.324951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AYQKQPTIFQ_	ENSG00000142534|ENST00000270625|RPS11;ENST00000599167.5_1_19:49999677-50000690:+|nuORF;ENST00000600027.5_1_19:49999677-50000944:+|nuORF	104.01359247289065	0.06577755598965461	4				NaN	NaN	0	NaN	8693	3382	12076
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12078	31.908	NaN	2148.3	30	0	152.81	0.106	+			50790	YENLTNKL	8	74	497.7634445573461	993.5123361814922	2	497.7631530761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YENLTNKL_	ENSG00000100503|ENST00000530997|NIN;nc|ENSG00000100503|Q8N4C6-11|NIN;nc|ENSG00000100503|Q8N4C6-5|NIN;nc|ENSG00000100503|Q8N4C6-6|NIN;nc|ENSG00000100503|Q8N4C6-9|NIN;nc|ENSG00000100503|Q8N4C6|NIN;NIN|p.E895Cfs*10|1|0.26|ENSG00000100503|chr14:50758344-50758347|TCTC/-|frameshift_variant;NIN|p.K1233Rfs*3|1|0.45|ENSG00000100503|chr14:50757332-50757332|T/-|frameshift_variant;NIN|p.N1391Kfs*8|1|0.03|ENSG00000100503|chr14:50756857-50756858|-/AGGAAAACAC|frameshift_variant	52.936696900407355	0.5717071646657654	4				NaN	NaN	0	NaN	8694	3382	12076
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12079	31.91	NaN	3038	30	0	456.7	0.106	+			40507	STYNPSISLK	10	61	555.2958851602699	1108.5772173873397	2	555.2960205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STYNPSISLK_	ENST00000477171.1_1_3:152017595-152017766:+|nuORF	66.9202029811203	0.3029018092171124	4				NaN	NaN	0	NaN	8695	3382	12076
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12080	31.912	NaN	3477.3	30	0	740.36	0.106			+	11673	FQVFGATFER	10	69	601.306264873061	NaN	0	601.3057250976562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FQVFGATFER_	REV__ENSG00000179914|ENST00000326245|ITLN1	35.17822180527639	0.3846679649904324	4				NaN	NaN	0	NaN	8696	3382	12076
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12081	31.914	NaN	2281.5	30	0	207.63	0.106			+	47237	VMLYLIVY	8	61	507.28983219157334	1012.5651114499467	2	507.289794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VMLYLIVY_	REV__ENSG00000159197|ENST00000290310|KCNE2	33.49298260027079	0.7007254697536482	4				NaN	NaN	0	NaN	8697	3382	12076
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12082	31.916	NaN	2580.4	30	0	186.62	0.037	+			25594	LQIMFGLDKN	10	61	589.8159423056499	1177.6173316780996	2	589.8148803710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LQIMFGLDKN_	ENST00000443119.7_3_16:70405905-70406055:+|nuORF;ENST00000563392.5_1_16:70367501-70367651:+|nuORF	29.170058357718403	0.6416167986984785	4				NaN	NaN	0	NaN	8698	3382	12076
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12083	31.916	NaN	2908.6	30	0	562.02	0.142			+	8837	EELRELPRQ	9	46	585.3167204518006	NaN	0	585.3162841796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EELRELPRQ_	REV__ENSG00000167880|ENST00000301607|EVPL	21.9598887501803	0.3626577482100488	4				NaN	NaN	0	NaN	8699	3382	12076
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12101	31.955	NaN	14013	30	0	6706.6	0.215	+			28677	NLVPTVPVPL	10	85	350.2179882970072	1047.6321354912216	3	350.21820068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NLVPTVPVPL_	ZHX2|p.K257T|1|0.37|ENSG00000178764|chr8:122952280-122952280|A/C|missense_variant	44.116797842482775	0.5112108506279902	4				NaN	NaN	0	NaN	8714	3385	12100
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12102	31.959	NaN	3953.8	30	0	535.04	0.106	+			43747	TLEAAQGLL	9	60	458.26084738662206	914.5071418400441	2	458.2606506347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TLEAAQGLL_	ENSG00000205220|ENST00000358514|PSMB10	49.44154591367651	0.3095138337212152	4				NaN	NaN	0	NaN	8715	3385	12100
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12103	31.961	NaN	13054	30	0	1188.9	0.106			+	-1	NCILDWFDDW	10	86	692.2866363055439	1382.5587196778877	2	692.285400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_NC(Carbamidomethyl (C))ILDWFDDW_	REV__ENSG00000170881|ENST00000303545|RNF139;REV__RNF139|p.R559Lfs*60|1|0.18|ENSG00000170881|chr8:124487325-124487325|G/-|frameshift_variant	36.446750945000026	0.5818864909973037	4				NaN	NaN	0	NaN	8716	3385	12100
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12104	31.963	NaN	8299.6	30	0	1340.3	0.106	+			36495	SEYDRGVNTF	10	78	594.2703312906804	1186.5261096481606	2	594.2699584960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SEYDRGVNTF_	ENSG00000143106|ENST00000271308|PSMA5;ENST00000484563.1_1_1:109955653-109968973:-|nuORF	84.81729255234993	0.1607459278640679	4				NaN	NaN	0	NaN	8717	3385	12100
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12105	31.964	NaN	5967.1	30	0	383.34	0.106			+	-1	EEEWFRGHVCQ	11	90	738.8188695053631	NaN	0	738.8186645507812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_EEEWFRGHVC(Carbamidomethyl (C))Q_	REV__CLEC18B|p.R274W|1|0.19|ENSG00000140839|chr16:74412211-74412211|G/A|missense_variant	19.1035232394073	0.456735970842152	4				NaN	NaN	0	NaN	8718	3385	12100
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12106	31.966	NaN	2180.3	30	0	397.02	0.035	+			30231	PSSSSLHPLP	10	53	511.2693466985509	1020.5241404639019	2	510.7943115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PSSSSLHPLP_	ENST00000548479.1_1_12:56325089-56330479:+|nuORF;ENST00000551296.5_1_12:56330167-56330479:+|nuORF	49.44154591367651	0.46214596422418036	4				NaN	NaN	0	NaN	8719	3385	12100
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12121	31.998	NaN	27508	30	0	5891.4	0.214	+			5440	ATYQTTLLH	9	86	524.2773652173815	1046.540177501563	2	524.27734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATYQTTLLH_	ENSG00000003147|ENST00000402384|ICA1;ENST00000562640.1_1_16:22010196-22010523:+|nuORF;ICA1|p.E307Lfs*26|1|0.05|ENSG00000003147|chr7:8141801-8141802|-/TTTTTCAA|frameshift_variant;nc|ENSG00000003147|Q05084-2|ICA1;nc|ENSG00000003147|Q05084-3|ICA1	109.47833844074708	0.029530294723441826	4				NaN	NaN	0	NaN	8731	3388	12120
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12122	32.001	NaN	3002.3	30	0	325.97	0.106			+	-1	HHYTLSSM	8	69	496.21713006792083	NaN	0	496.21728515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_HHYTLSSM(Oxidation (M))_	REV__ENSG00000203326|ENST00000474037|ZNF525;REV__ZNF765|p.T478M|1|0.18|ENSG00000196417|chr19:53408988-53408988|C/T|missense_variant	60.29395666154354	1.7418937515398478	4				NaN	NaN	0	NaN	8732	3388	12120
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12123	32.003	NaN	4753.9	30	0	836.44	0.106	+			1321	AETEPIVKM	9	68	509.2683713790452	1016.5221898248905	2	509.2676086425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AETEPIVKM_	ENSG00000104408|ENST00000220849|EIF3E;ENST00000518442.5_1_8:109247181-109261015:-|nuORF	47.657333605630114	0.33044192980041115	4				NaN	NaN	0	NaN	8733	3388	12120
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12124	32.005	NaN	3015.1	30	0	625.93	0.037	+			23996	LEAEEDNDTE	10	65	582.7283935546875	NaN	0	582.7283935546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LEAEEDNDTE_	ENSG00000152270|ENST00000282096|PDE3B;nc|ENSG00000152270|Q13370-2|PDE3B	25.57405402267927	0.4162033004763879	4				NaN	NaN	0	NaN	8734	3388	12120
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12142	32.043	NaN	41395	30	0	6267.1	0.214	+			15685	GVMTVLIKR	9	94	508.8179278167113	1015.6213027002226	2	508.81805419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVMTVLIKR_	ENSG00000109971|ENST00000534624|HSPA8;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;HSPA8|p.K569Dfs*6|1|0.3|ENSG00000109971|chr11:123058302-123058303|TC/-|frameshift_variant;nc|ENSG00000109971|P11142-2|HSPA8	143.8867514904718	0.008656634767784652	4				NaN	NaN	0	NaN	8749	3391	12141
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12143	32.046	NaN	11380	30	0	2953.4	0.106	+			49754	VYPEKLATKF	10	69	598.339951707227	1194.6653504812539	2	598.3401489257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYPEKLATKF_	ENSG00000136813|ENST00000684092|ECPAS;nc|ENSG00000136813|Q5VYK3|ECPAS	85.92353377893507	0.15441247375292388	4				NaN	NaN	0	NaN	8750	3391	12141
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12144	32.048	NaN	3259.9	30	0	569.75	0.106				-1	YQLIEHCQI	9	69	602.2952042963287	1202.5758556594574	2	602.2960815429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_YQLIEHC(Carbamidomethyl (C))QI_	ENSG00000197782|ENST00000683561|ZNF780A;nc|ENSG00000197782|O75290-3|ZNF780A	35.15202426646627	0.4747332964206883	4				NaN	NaN	0	NaN	8751	3391	12141
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12145	32.05	NaN	2763.9	30	0	404.54	0.106			+	26251	LSSSLRRCTR	10	65	589.82373046875	NaN	0	589.82373046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSSSLRRCTR_	REV__ASPG|p.C95Rfs*75|1|0.1|ENSG00000166183|chr14:104093581-104093582|-/CG|frameshift_variant	36.31764250033197	0.3809266711384728	4				NaN	NaN	0	NaN	8752	3391	12141
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12146	32.052	NaN	2629.5	30	0	304.05	0.106	+			28027	MYVFASHHF	9	55	577.7585233516346	NaN	0	577.7581176757812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_M(Oxidation (M))YVFASHHF_	DUOX2|p.R1211C|1|0.09|ENSG00000140279|chr15:45097676-45097676|G/A|missense_variant;ENSG00000137857|ENST00000389037|DUOX1;ENSG00000140279|ENST00000389039|DUOX2;ENST00000561220.6_1_15:45434150-45457096:+|nuORF;nc|ENSG00000137857|Q9NRD9-2|DUOX1;nc|ENSG00000140279|Q9NRD8|DUOX2	47.91560031466742	0.22105767942158736	4				NaN	NaN	0	NaN	8753	3391	12141
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12147	32.054	NaN	3457.1	30	0	649.39	0.035			+	51101	YLTDGLSRP	9	60	511.2693466985509	1020.5241404639019	2	511.2696228027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YLTDGLSRP_	REV__ENSG00000187605|ENST00000409262|TET3;REV__nc|ENSG00000187605|O43151-2|TET3;REV__TET3|p.A1477Pfs*54|1|0.32|ENSG00000187605|chr2:74101214-74101214|G/-|frameshift_variant;REV__TET3|p.F1385Lfs*17|1|0.17|ENSG00000187605|chr2:74100936-74100936|C/-|frameshift_variant;REV__TET3|p.S1618Afs*5|2|0.34|ENSG00000187605|chr2:74101634-74101634|C/-|frameshift_variant;REV__TET3|p.T1749Hfs*5|2|0.29|ENSG00000187605|chr2:74102024-74102025|-/G|frameshift_variant;REV__TET3|p.V1242Gfs*44|1|0.4|ENSG00000187605|chr2:74100510-74100511|-/G|frameshift_variant	49.44154591367651	0.3095138337212152	4				NaN	NaN	0	NaN	8754	3391	12141
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12165	32.091	NaN	15677	30	0	8928.2	0.214				-1	MLLGGLKRL	9	76	339.54732319244965	1015.620140177549	3	339.5475769042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))LLGGLKRL_	ENST00000470052.5_1_10:122611610-122611718:+|nuORF	26.69291269510374	0.5537881896960711	4				NaN	NaN	0	NaN	8769	3394	12164
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12166	32.095	NaN	6374.8	30	0	941.99	0.106	+			20291	KEPEINTTL	9	73	522.7823397673799	1043.5501266015597	2	522.7824096679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEPEINTTL_	ENSG00000165487|ENST00000382374|MICU2;ENST00000480341.5_1_13:22077016-22089705:-|nuORF	104.01359247289065	0.03510646158778409	4				NaN	NaN	0	NaN	8770	3394	12164
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12167	32.097	NaN	7667.5	30	0	853.68	0.106	+			14067	GSISDKFFQK	10	71	578.8041361112873	1155.5937192893746	2	578.803955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GSISDKFFQK_	ENSG00000089472|ENST00000343002|HEPH;HEPH|p.R1086Qfs*4|1|0.29|ENSG00000089472|chrX:66266444-66266445|-/C|frameshift_variant;nc|ENSG00000089472|Q9BQS7-2|HEPH;nc|ENSG00000089472|Q9BQS7-3|HEPH;nc|ENSG00000089472|Q9BQS7-4|HEPH	112.10723106719422	0.0417416748461292	4				NaN	NaN	0	NaN	8771	3394	12164
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12168	32.099	NaN	3541.8	30	0	531.32	0.036	+			43895	TNFEDRNAF	9	61	557.2520608633446	1112.489568793489	2	557.2518310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TNFEDRNAF_	CYFIP1|p.K121Nfs*2|1|0.14|ENSG00000273749|chr15:22944582-22944582|T/-|frameshift_variant;CYFIP2|p.Q484Rfs*7|1|0.08|ENSG00000055163|chr5:157319855-157319856|-/GA|frameshift_variant;ENSG00000055163|ENST00000620254|CYFIP2;ENSG00000273749|ENST00000617928|CYFIP1;nc|ENSG00000055163|Q96F07|CYFIP2	35.15202426646627	0.4747332964206883	4				NaN	NaN	0	NaN	8772	3394	12164
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12186	32.136	NaN	5807.5	30	0	585.12	0.214	+			10650	EYQIKTNQL	9	65	568.8011883387531	1135.5878237443062	2	568.80126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EYQIKTNQL_	ENSG00000148444|ENST00000376836|COMMD3;ENST00000463409.6_1_10:22605382-22615407:+|nuORF;ENST00000496071.5_1_10:22607528-22608924:+|nuORF;ENST00000602395.1_1_10:22607528-22615407:+|nuORF;ENST00000602574.5_1_10:22607528-22607842:+|nuORF	90.36981228632155	0.0638227155548745	4				NaN	NaN	0	NaN	8787	3397	12185
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12187	32.14	NaN	3491.7	30	0	480.04	0.106				-1	 	0	77	336.5341068044087	1006.5804910134261	3	336.5342102050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8788	3397	12185
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12188	32.142	NaN	14823	30	0	955.07	0.106	+			45625	TYQEVAQKF	9	79	557.2828166297954	1112.5510803263908	2	557.282958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TYQEVAQKF_	ENSG00000093072|ENST00000399837|ADA2;nc|ENSG00000093072|Q9NZK5-2|ADA2	145.46060221211434	0.007927189773590037	4				NaN	NaN	0	NaN	8789	3397	12185
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12189	32.144	NaN	5559.2	30	0	568.05	0.106	+			5108	ATSPIIIHRL	10	74	560.8459487783082	1119.6773446234163	2	560.8455810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATSPIIIHRL_	ENSG00000135336|ENST00000392844|ORC3;nc|ENSG00000135336|Q9UBD5-2|ORC3;nc|ENSG00000135336|Q9UBD5-3|ORC3	55.08391021199286	0.41055145962533396	4				NaN	NaN	0	NaN	8790	3397	12185
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12190	32.145	NaN	2810.3	30	0	380.15	0.106				-1	 	0	63	475.19586586569613	474.18858939909614	1	475.1957092285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8791	3397	12185
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12191	32.147	NaN	3053	30	0	456.08	0.037			+	36564	SFRKRHFW	8	71	582.314257744636	1162.613962556072	2	582.3151245117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SFRKRHFW_	REV__ENSG00000186038|ENST00000415389|HTR3E;REV__nc|ENSG00000186038|A5X5Y0-2|HTR3E	33.51558372728122	0.7005509609380386	4				NaN	NaN	0	NaN	8792	3397	12185
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12209	32.184	NaN	36261	30	0	2673.1	0.214	+			13140	GGMSIFLKK	9	94	490.7832325303648	NaN	0	490.7834167480469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GGMSIFLKK_	ENST00000264995.7_1_3:131220431-131221595:-|nuORF	127.46168284122857	0.0009793558177450096	4				NaN	NaN	0	NaN	8807	3400	12208
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12210	32.188	NaN	16645	30	0	3199.5	0.106	+			14095	GSLGFTVTK	9	69	455.2556097757416	908.4966666182833	2	455.25531005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSLGFTVTK_	ENSG00000163629|ENST00000411767|PTPN13;nc|ENSG00000163629|Q12923-2|PTPN13;nc|ENSG00000163629|Q12923-3|PTPN13;nc|ENSG00000163629|Q12923-4|PTPN13;PTPN13|p.T2330Qfs*13|1|0.12|ENSG00000163629|chr4:86807799-86807799|A/-|frameshift_variant	138.06239232086	0.011389075116295402	4				NaN	NaN	0	NaN	8808	3400	12208
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12211	32.19	NaN	7632.3	30	0	541.63	0.106	+			38232	SQLEQENNLLK	11	84	658.3466580229846	1314.678763112769	2	658.3467407226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SQLEQENNLLK_	ENSG00000102804|ENST00000458659|TSC22D1;ENST00000496314.1_1_13:45008764-45009186:-|nuORF;nc|ENSG00000102804|Q15714-2|TSC22D1;nc|ENSG00000102804|Q15714-3|TSC22D1;nc|ENSG00000102804|Q15714-5|TSC22D1	120.63048641472336	0.018968965619156397	4				NaN	NaN	0	NaN	8809	3400	12208
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12212	32.192	NaN	5146.5	30	0	1028.3	0.106	+			23208	KYFDNSQSL	9	64	551.2646744287604	1100.5147959243207	2	551.2649536132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KYFDNSQSL_	nc|ENSG00000052841|Q96AE7-2|TTC17	85.16082228582465	0.07850854922700509	4				NaN	NaN	0	NaN	8810	3400	12208
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12213	32.194	NaN	27552	30	0	18024	0.106				-1	 	0	91	349.8778479795343	1046.611714538803	3	349.8781433105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8811	3400	12208
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12214	32.195	NaN	4826.6	30	0	681.9	0.039			+	-1	LDASNCRNRAK	11	68	652.8283280005045	1303.6421030678089	2	652.8272705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_LDASNC(Carbamidomethyl (C))RNRAK_	REV__ENSG00000141052|ENST00000425538|MYOCD;REV__MYOCD|p.N125Kfs*16|1|0.19|ENSG00000141052|chr17:12722960-12722961|-/A|frameshift_variant;REV__MYOCD|p.N125Tfs*9|1|0.37|ENSG00000141052|chr17:12722961-12722961|A/-|frameshift_variant;REV__MYOCD|p.P271Qfs*46|1|0.19|ENSG00000141052|chr17:12744273-12744273|C/-|frameshift_variant;REV__MYOCD|p.P457Rfs*42|2|0.26|ENSG00000141052|chr17:12752653-12752653|C/-|frameshift_variant;REV__MYOCD|p.Q636Sfs*59|1|0.39|ENSG00000141052|chr17:12753188-12753189|-/C|frameshift_variant;REV__MYOCD|p.S229Afs*4|2|0.36|ENSG00000141052|chr17:12739289-12739289|C/-|frameshift_variant;REV__MYOCD|p.S481Pfs*18|2|0.35|ENSG00000141052|chr17:12752724-12752724|C/-|frameshift_variant;REV__nc|ENSG00000141052|Q8IZQ8|MYOCD	30.317721548370564	0.6717830234747728	4				NaN	NaN	0	NaN	8812	3400	12208
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12215	32.196	NaN	2704.2	30	0	405.94	0.142			+	33569	RLHIAIDGLL	10	66	560.8459487783082	1119.6773446234163	2	560.8463134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RLHIAIDGLL_	REV__ADGRV1|p.F5465Lfs*13|1|0.26|ENSG00000164199|chr5:90828964-90828964|T/-|frameshift_variant;REV__ADGRV1|p.L4664Cfs*23|1|0.28|ENSG00000164199|chr5:90789790-90789790|A/-|frameshift_variant;REV__ADGRV1|p.T5738Pfs*48|1|0.19|ENSG00000164199|chr5:90853288-90853288|A/-|frameshift_variant;REV__ADGRV1|p.Y5091Tfs*7|2|0.25|ENSG00000164199|chr5:90810525-90810525|T/-|frameshift_variant;REV__ENSG00000164199|ENST00000405460|ADGRV1;REV__ENST00000509621.1_3_5:89989878-90055411:+|nuORF	28.081489160057373	0.6505064946289502	4				NaN	NaN	0	NaN	8813	3400	12208
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12233	32.235	NaN	39330	30	0	8687.9	0.214	+			5905	AVLDFVKQK	9	88	524.3137200018853	1046.6128870705704	2	524.3136596679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVLDFVKQK_	ENSG00000186001|ENST00000425562|LRCH3;nc|ENSG00000186001|Q96II8-2|LRCH3;nc|ENSG00000186001|Q96II8-3|LRCH3;nc|ENSG00000186001|Q96II8-4|LRCH3	120.8684288430529	0.02067403653475984	4				NaN	NaN	0	NaN	8828	3403	12232
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12234	32.239	NaN	7268.7	30	0	914.62	0.106			+	17507	IDIGGFKK	8	75	439.260508234291	876.5064635353821	2	439.26080322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IDIGGFKK_	REV__ENSG00000119471|ENST00000398805|HSDL2	63.30626980617807	0.4690498839812213	4				NaN	NaN	0	NaN	8829	3403	12232
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12235	32.241	NaN	3179.4	30	0	356.03	0.106				-1	 	0	65	473.2594668927553	472.2521904261553	1	473.2588806152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8830	3403	12232
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12236	32.243	NaN	3341.1	30	0	421.02	0.106			+	31911	QQKVALAKL	9	58	499.8213968088824	NaN	0	499.8212890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QQKVALAKL_	REV__ENSG00000198874|ENST00000359626|TYW1;REV__ENSG00000277149|ENST00000620995|TYW1B;REV__nc|ENSG00000277149|Q6NUM6-2|TYW1B;REV__TYW1B|p.L552Yfs*11|1|0.05|ENSG00000277149|chr7:72616803-72616804|-/AATA|frameshift_variant;REV__TYW1B|p.S551Mfs*13|1|0.04|ENSG00000277149|chr7:72616805-72616806|-/TCAAACA|frameshift_variant	37.15910966729921	0.2899585034171616	4				NaN	NaN	0	NaN	8831	3403	12232
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12237	32.245	NaN	3256.9	30	0	1365.2	0.106				-1	 	0	49	566.2661570591516	565.2588805925516	1	566.2672729492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8832	3403	12232
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12238	32.246	NaN	1986.9	30	0	147.76	0.036			+	37738	SLTLVFQRQ	9	67	546.3137995287616	1090.613046124323	2	546.3148803710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLTLVFQRQ_	REV__ENSG00000058600|ENST00000299853|POLR3E;REV__ENST00000564061.5_1_16:22308800-22337695:+|nuORF;REV__nc|ENSG00000058600|Q9NVU0-2|POLR3E;REV__nc|ENSG00000058600|Q9NVU0-3|POLR3E;REV__nc|ENSG00000058600|Q9NVU0-4|POLR3E;REV__nc|ENSG00000058600|Q9NVU0-5|POLR3E;REV__POLR3E|p.G595Afs*51|1|0.33|ENSG00000058600|chr16:22326189-22326189|C/-|frameshift_variant	53.351449002276354	0.2690372970092375	4				NaN	NaN	0	NaN	8833	3403	12232
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12239	32.247	NaN	2575	30	0	539.17	0.139			+	20673	KGMGGAGF	8	64	362.6745187431141	723.3344845530282	2	362.6745910644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KGMGGAGF_	REV__DIRAS1|p.V18M|1|0.44|ENSG00000176490|chr19:2717755-2717755|C/T|missense_variant	15.63621529709179	0.7929342111279789	4				NaN	NaN	0	NaN	8834	3403	12232
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12255	32.282	NaN	10441	30	0	1805	0.214	+			14956	GTMNLGGSLTR	11	69	553.7849660301796	1105.555379127159	2	553.7847900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTMNLGGSLTR_	ENSG00000077549|ENST00000264202|CAPZB;nc|ENSG00000077549|P47756-1|CAPZB	158.47086538638308	5.640651670997326E-05	4				NaN	NaN	0	NaN	8847	3406	12254
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12256	32.286	NaN	3616.3	30	0	562.44	0.106	+			4727	ATMGETVMSVK	11	64	577.2838536174619	1152.5531543017237	2	577.2835693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATMGETVMSVK_	ENSG00000180098|ENST00000373830|TRNAU1AP;ENST00000411406.3_1_1:28879622-28880250:+|nuORF;ENST00000464880.5_1_1:28879622-28887433:+|nuORF;ENST00000480930.5_1_1:28879622-28887666:+|nuORF;ENST00000491577.5_1_1:28879622-28887259:+|nuORF;ENST00000495995.5_1_1:28880088-28887666:+|nuORF;TRNAU1AP-PTPRU|1|fusion;TRNAU1AP-PTPRU|2|fusion;TRNAU1AP-PTPRU|3|fusion;TRNAU1AP|p.Q222Sfs*29|1|0.24|ENSG00000180098|chr1:28571305-28571305|C/-|frameshift_variant	94.81966064512906	0.07904432929123503	4				NaN	NaN	0	NaN	8848	3406	12254
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12257	32.288	NaN	3196.6	30	0	247.67	0.106	+			6512	AYAPPPHVI	9	64	482.7662577356735	963.517962538147	2	482.7655029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AYAPPPHVI_	ENSG00000128335|ENST00000358502|APOL2	60.403631409065575	0.21025000616765316	4				NaN	NaN	0	NaN	8849	3406	12254
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12258	32.289	NaN	2304.2	30	0	406.24	0.106	+			27831	MSSIKLKEE	9	61	532.7857055664062	NaN	0	532.7857055664062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MSSIKLKEE_	ENSG00000213398|ENST00000264005|LCAT	33.921630207806714	0.3063038642147651	4				NaN	NaN	0	NaN	8850	3406	12254
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12259	32.291	NaN	1427.6	30	0	129.51	0.106			+	597	ADLYGQRC	8	48	463.213717207667	NaN	0	463.2135009765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ADLYGQRC_	REV__ENSG00000100341|ENST00000216177|PNPLA5;REV__nc|ENSG00000100341|Q7Z6Z6-2|PNPLA5;REV__PNPLA5|p.G289Afs*30|1|0.35|ENSG00000100341|chr22:43886386-43886386|C/-|frameshift_variant	25.450171626174864	1.7418937515398478	4				NaN	NaN	0	NaN	8851	3406	12254
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12260	32.293	NaN	1729.4	30	0	177.52	0.039	+			16694	HKHILAKNYF	10	55	635.8541870117188	NaN	0	635.8541870117188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HKHILAKNYF_	ENSG00000164675|ENST00000324698|IQUB	20.94693142431847	0.4201028297492154	4				NaN	NaN	0	NaN	8852	3406	12254
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12261	32.294	NaN	1312.1	30	0	141.79	0.143	+			49772	VYQKLLERM	9	54	590.332218830015	1178.64988472683	2	590.3317260742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VYQKLLERM_	ENSG00000120708|ENST00000442011|TGFBI;ENST00000504411.1_1_5:135396881-135398912:+|nuORF	53.351449002276354	0.2690372970092375	4				NaN	NaN	0	NaN	8853	3406	12254
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12277	32.329	NaN	7590.1	30	0	811.17	0.214	+			48162	VSYTRSVTL	9	71	513.2852345619561	1024.5559161907122	2	513.2847900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSYTRSVTL_	ENSG00000275395|ENST00000616721|FCGBP;ENSG00000275395|ENST00000616721|FCGBP;FCGBP-ACSS2|1|fusion;FCGBP-ACSS2|1|fusion;nc|ENSG00000275395|Q9Y6R7|FCGBP;nc|ENSG00000275395|Q9Y6R7|FCGBP;nc|ENSG00000275395|Q9Y6R7|FCGBP	96.0336014099291	0.047854655524928534	4				NaN	NaN	0	NaN	8866	3409	12276
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12278	32.332	NaN	901.44	30	0	111.11	0.039			+	-1	IACTRIRDTR	10	47	631.3419799804688	NaN	0	631.3419799804688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_IAC(Carbamidomethyl (C))TRIRDTR_	REV__ENSG00000184110|ENST00000331666|EIF3C;REV__ENSG00000205609|ENST00000380876|EIF3CL;REV__ENST00000565932.5_1_16:28734455-28746831:+|nuORF;REV__ENST00000566519.1_1_16:28738032-28738629:+|nuORF;REV__nc|ENSG00000184110|Q99613-2|EIF3C	19.1035232394073	0.4201028297492154	4				NaN	NaN	0	NaN	8867	3409	12276
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12296	32.37	NaN	9858.9	30	0	1255.2	0.214	+			25380	LPHQPLATY	9	74	520.2812335617044	1038.5479141902088	2	520.2821044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LPHQPLATY_	ENSG00000110777|ENST00000393067|POU2AF1	112.41091882917199	0.026537921851008135	4				NaN	NaN	0	NaN	8882	3412	12295
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12297	32.373	NaN	3399.3	30	0	427.05	0.106	+			37291	SLASQGLVLA	10	63	479.782120458234	957.549687983268	2	479.7818603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLASQGLVLA_	nc|ENSG00000197177|Q86SQ6-1|ADGRA1	45.97224482568171	0.49411383603842696	4				NaN	NaN	0	NaN	8883	3412	12295
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12298	32.375	NaN	3778.1	30	0	530.83	0.03				-1	 	0	76	322.1934653743647	642.3723778155294	2	322.19366455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8884	3412	12295
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12316	32.41	NaN	10867	30	0	2850	0.214				-1	 	0	73	377.74592845271746	753.477303972235	2	377.7459411621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	8899	3415	12315
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12317	32.414	NaN	4766.3	30	0	1915.3	0.106			+	21371	KMFLGTGLL	9	67	490.2856193636671	NaN	0	490.285400390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KMFLGTGLL_	REV__DCSTAMP|p.M456*|1|0.36|ENSG00000164935|chr8:104356148-104356148|A/-|frameshift_variant;REV__ENSG00000164935|ENST00000297581|DCSTAMP;REV__nc|ENSG00000164935|Q9H295-2|DCSTAMP	37.15910966729921	0.2899585034171616	4				NaN	NaN	0	NaN	8900	3415	12315
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12318	32.416	NaN	3864.6	30	0	302.16	0.106	+			15686	GVMTVLIKR	9	71	508.8179278167113	1015.6213027002226	2	508.81756591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GVMTVLIKR_	ENSG00000109971|ENST00000534624|HSPA8;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;HSPA8|p.K569Dfs*6|1|0.3|ENSG00000109971|chr11:123058302-123058303|TC/-|frameshift_variant;nc|ENSG00000109971|P11142-2|HSPA8	54.776311868738084	0.25715957988447635	4				NaN	NaN	0	NaN	8901	3415	12315
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12319	32.418	NaN	4100.7	30	0	331.84	0.106	+			11978	FVNYNVKSPI	10	77	590.82032828356	1179.62610363392	2	590.8203735351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FVNYNVKSPI_	ENSG00000106105|ENST00000389266|GARS1;ENST00000478124.5_1_7:30634537-30662079:+|nuORF;nc|ENSG00000106105|P41250-2|GARS1	51.52775601994872	0.4429225830406686	4				NaN	NaN	0	NaN	8902	3415	12315
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12320	32.42	NaN	3482	30	0	321.96	0.106				-1	ASYLPMVRG	9	67	337.1755753069979	NaN	0	337.17535400390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_ASYLPM(Oxidation (M))VRG_	nc|ENSG00000113361|P55285-2|CDH6	31.529811441608018	0.3183796599642538	4				NaN	NaN	0	NaN	8903	3415	12315
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12321	32.422	NaN	4032	30	0	385.43	0.038	+			40453	STVQGSNIFER	11	77	619.3120854394348	1236.6096179456695	2	619.8141479492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STVQGSNIFER_	ENSG00000124145|ENST00000372733|SDC4;nc|ENSG00000124145|P31431-2|SDC4	50.79123845855914	0.4102859592092987	4				NaN	NaN	0	NaN	8904	3415	12315
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12337	32.455	NaN	4872.1	30	0	620.71	0.215	+			20292	KEPEINTTL	9	66	522.7823397673799	1043.5501266015597	2	522.7823486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEPEINTTL_	ENSG00000165487|ENST00000382374|MICU2;ENST00000480341.5_1_13:22077016-22089705:-|nuORF	56.632244143249146	0.24168844994051353	4				NaN	NaN	0	NaN	8917	3418	12336
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12338	32.458	NaN	2960.5	30	0	375.18	0.106	+			2562	AQATISFPK	9	57	481.76905619329466	961.5235594533893	2	481.7685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AQATISFPK_	CDC6|p.P86Lfs*17|1|0.14|ENSG00000094804|chr17:40291132-40291132|C/-|frameshift_variant;ENSG00000094804|ENST00000209728|CDC6	44.377184641726394	0.36891676396732553	4				NaN	NaN	0	NaN	8918	3418	12336
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12339	32.461	NaN	4679.1	30	0	297.52	0.106	+			20349	KESAEFQTQL	10	74	590.7959975246001	1179.5774421160002	2	590.7958374023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KESAEFQTQL_	ENSG00000047410|ENST00000367478|TPR;TPR|p.E1141Dfs*29|1|0.08|ENSG00000047410|chr1:186344085-186344086|-/CAGGTAAA|frameshift_variant;TPR|p.P2083Qfs*3|1|0.31|ENSG00000047410|chr1:186323735-186323735|G/-|frameshift_variant;TPR|p.T2133Lfs*63|1|0.03|ENSG00000047410|chr1:186322382-186322383|-/GTACTAATAAG|frameshift_variant;TPR|p.V1142Efs*26|1|0.08|ENSG00000047410|chr1:186344083-186344084|-/TT|frameshift_variant	50.79123845855914	0.44970922346023856	4				NaN	NaN	0	NaN	8919	3418	12336
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12340	32.462	NaN	4438.8	30	0	513.17	0.106	+			5289	ATVIFVASQK	10	59	532.311193338119	1062.6078337430379	2	532.3116455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATVIFVASQK_	ENSG00000143493|ENST00000366994|INTS7;INTS7|p.F796Sfs*34|1|0.34|ENSG00000143493|chr1:211946635-211946635|A/-|frameshift_variant;nc|ENSG00000143493|Q9NVH2-2|INTS7;nc|ENSG00000143493|Q9NVH2-3|INTS7;nc|ENSG00000143493|Q9NVH2-4|INTS7	104.01359247289065	0.06577755598965461	4				NaN	NaN	0	NaN	8920	3418	12336
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12341	32.464	NaN	2444.7	30	0	240.36	0.106	+			49678	VYKCLSENI	9	71	563.28473913797	1124.5549253427398	2	563.2852783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_VYKC(Carbamidomethyl (C))LSENI_	ENSG00000082898|ENST00000401558|XPO1;ENST00000428210.5_1_2:61705957-61719950:-|nuORF;ENST00000461407.5_1_2:61712881-61715780:-|nuORF	69.6276240434122	0.14239879520340665	4				NaN	NaN	0	NaN	8921	3418	12336
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12342	32.466	NaN	2114.9	30	0	377.82	0.032			+	-1	WCCSCCSSGC	10	56	384.7720911388853	NaN	0	384.7724609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Carbamidomethyl (C)	_WC(Carbamidomethyl (C))CSCCSSGC(Carbamidomethyl (C))_	REV__ENST00000228741.7_1_12:96588285-96617411:+|nuORF	2.027967841256958	0.4201028297492154	4				NaN	NaN	0	NaN	8922	3418	12336
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12355	32.493	NaN	3142.7	30	0	308.5	0.214	+			47062	VLGRLSYSI	9	78	336.5342161156324	NaN	0	336.53411865234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VLGRLSYSI_	ENSG00000186795|ENST00000334549|KCNK18	33.51558372728122	0.30835390848773375	4				NaN	NaN	0	NaN	8932	3421	12354
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12356	32.497	NaN	3357.6	30	0	327.91	0.106	+			19004	IVVEHIIMK	9	67	541.3259710347878	1080.6373891363755	2	541.3265991210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IVVEHIIMK_	ENSG00000109133|ENST00000504986|TMEM33;TMEM33|p.L211P|1|0.2|ENSG00000109133|chr4:41954087-41954087|T/C|missense_variant	49.536043120802724	0.308405419312776	4				NaN	NaN	0	NaN	8933	3421	12354
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12357	32.499	NaN	2638.4	30	0	311.27	0.106	+			1232	AERDVYTGDAL	11	56	605.2906308672855	1208.5667088013709	2	605.29150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AERDVYTGDAL_	ENSG00000008018|ENST00000262193|PSMB1	43.650786325866115	0.5079891456189096	4				NaN	NaN	0	NaN	8934	3421	12354
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12358	32.501	NaN	2276.7	30	0	207.9	0.034	+			2815	ASAAAALVLK	10	69	457.7872191893122	913.5598854454245	2	457.78680419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASAAAALVLK_	ENSG00000137076|ENST00000314888|TLN1;nc|ENSG00000137076|Q9Y490-2|TLN1;TLN1|p.P1628Rfs*20|1|0.44|ENSG00000137076|chr9:35707144-35707144|G/-|frameshift_variant	65.46538089061403	0.31613324008013116	4				NaN	NaN	0	NaN	8935	3421	12354
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12372	32.53	NaN	2747.1	30	0	614.54	0.143	+			25637	LQRLHSQV	8	63	490.7832325303648	NaN	0	490.7828369140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LQRLHSQV_	ENSG00000135127|ENST00000548673|BICDL1;ENST00000550197.1_1_12:120512327-120527926:+|nuORF;nc|ENSG00000135127|Q6ZP65-2|BICDL1	29.170058357718403	1.7418937515398478	4				NaN	NaN	0	NaN	8946	3424	12371
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12386	32.561	NaN	21156	30	0	4058.9	0.214	+			12589	GEHGLIIRV	9	91	331.8659647119735	992.5760647361205	3	331.8662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEHGLIIRV_	ENSG00000078618|ENST00000352171|NRDC;nc|ENSG00000078618|O43847-2|NRDC	51.19269402634007	0.2889735674168909	4				NaN	NaN	0	NaN	8957	3427	12385
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12387	32.565	NaN	14213	30	0	7713.6	0.106	+			22983	KVRVYEFR	8	73	366.21347606558703	1095.6185987969611	3	366.2135925292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVRVYEFR_	ENST00000460870.1_1_1:208383501-208390355:-|nuORF;nc|ENSG00000076356|O75051-2|PLXNA2	24.20275056022122	0.7724576178584145	4				NaN	NaN	0	NaN	8958	3427	12385
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12388	32.567	NaN	6096.9	30	0	697.37	0.106	+			49379	VVSVILEQK	9	73	507.813506281165	1013.6124596291301	2	507.8135070800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVSVILEQK_	ANKFY1|p.P691Rfs*61|1|0.4|ENSG00000185722|chr17:4182230-4182230|G/-|frameshift_variant;ENSG00000185722|ENST00000341657|ANKFY1;nc|ENSG00000185722|Q9P2R3-2|ANKFY1;nc|ENSG00000185722|Q9P2R3-4|ANKFY1	132.757866228626	0.013877640931359021	4				NaN	NaN	0	NaN	8959	3427	12385
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12389	32.569	NaN	4489.8	30	0	534.61	0.106	+			36269	SENQNRAYVTL	11	70	647.8235826779239	1293.6326124226478	2	647.8242797851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SENQNRAYVTL_	ENSG00000214717|ENST00000652001|ZBED1	42.33807565288922	0.5259510355945483	4				NaN	NaN	0	NaN	8960	3427	12385
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12390	32.57	NaN	2183.9	30	0	324.11	0.106	+			33914	RRSRSTSKT	9	55	539.8058666968101	1077.59718046042	2	539.8069458007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RRSRSTSKT_	ENSG00000116754|ENST00000370949|SRSF11;ENST00000463859.5_1_1:70703183-70712812:+|nuORF;nc|ENSG00000116754|Q05519-2|SRSF11;SRSF11|p.K357Sfs*62|1|0.12|ENSG00000116754|chr1:70249995-70249995|A/-|frameshift_variant	30.317721548370564	0.5199124245378496	4				NaN	NaN	0	NaN	8961	3427	12385
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12391	32.572	NaN	2323.6	30	0	336.42	0.036			+	-1	VDMFKRLE	8	62	527.2728271484375	NaN	0	527.2728271484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_VDM(Oxidation (M))FKRLE_	REV__DNAH5|p.F4486Lfs*7|2|0.23|ENSG00000039139|chr5:13701317-13701317|A/-|frameshift_variant;REV__DNAH5|p.G1976Efs*78|3|0.44|ENSG00000039139|chr5:13830731-13830731|C/-|frameshift_variant;REV__DNAH5|p.I1855Sfs*16|1|0.33|ENSG00000039139|chr5:13841052-13841052|T/-|frameshift_variant;REV__DNAH5|p.I2945Rfs*76|1|0.07|ENSG00000039139|chr5:13780948-13780949|-/CATTTCTCTT|frameshift_variant;REV__DNAH5|p.I4068*|1|0.07|ENSG00000039139|chr5:13721077-13721077|T/-|frameshift_variant;REV__DNAH5|p.L1467Wfs*3|1|0.23|ENSG00000039139|chr5:13864593-13864593|A/-|frameshift_variant;REV__DNAH5|p.P3316Lfs*22|3|0.33|ENSG00000039139|chr5:13766130-13766130|G/-|frameshift_variant;REV__ENSG00000039139|ENST00000265104|DNAH5	44.116797842482775	1.7418937515398478	4				NaN	NaN	0	NaN	8962	3427	12385
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12406	32.604	NaN	15540	30	0	3087.1	0.214	+			19840	KEEELQAAL	9	79	515.7747840085688	1029.5350150839374	2	515.7745971679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEEELQAAL_	ENSG00000100345|ENST00000216181|MYH9;ENSG00000105357|ENST00000642316|MYH14;ENSG00000133392|ENST00000300036|MYH11;MYH14|p.L1950Sfs*14|1|0.34|ENSG00000105357|chr19:50309646-50309646|C/-|frameshift_variant;nc|ENSG00000105357|Q7Z406-4|MYH14;nc|ENSG00000105357|Q7Z406-5|MYH14;nc|ENSG00000105357|Q7Z406-6|MYH14;nc|ENSG00000105357|Q7Z406|MYH14;nc|ENSG00000133392|P35749-2|MYH11;nc|ENSG00000133392|P35749-3|MYH11;nc|ENSG00000133392|P35749-4|MYH11;SYNDIG1-MYH9|1|fusion	66.96192283764107	0.15557981141143568	4				NaN	NaN	0	NaN	8974	3430	12405
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12407	32.607	NaN	7513.4	30	0	1302	0.106	+			12657	GEIQEIVKT	9	76	508.78469442961574	NaN	0	508.7846374511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEIQEIVKT_	ENSG00000184432|ENST00000333188|COPB2;nc|ENSG00000184432|P35606-2|COPB2	45.908116695636124	0.23489233048344244	4				NaN	NaN	0	NaN	8975	3430	12405
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12408	32.609	NaN	6965.2	30	0	3283.1	0.106			+	26127	LSPLSLGRA	9	63	457.2771041475957	912.5396553619914	2	457.27691650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSPLSLGRA_	REV__ENSG00000162976|ENST00000295083|SLC66A3;REV__nc|ENSG00000162976|Q8N755-2|SLC66A3	52.936696900407355	0.27249468807391813	4				NaN	NaN	0	NaN	8976	3430	12405
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12409	32.611	NaN	3399.3	30	0	561.76	0.106			+	10486	EVRPSAVDP	9	68	485.2540414138628	968.4935298945256	2	485.2539367675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EVRPSAVDP_	REV__ENSG00000136715|ENST00000643581|SAP130;REV__nc|ENSG00000136715|Q9H0E3-2|SAP130;REV__nc|ENSG00000136715|Q9H0E3-3|SAP130;REV__SAP130|p.R833Kfs*17|1|0.38|ENSG00000136715|chr2:127950308-127950309|-/G|frameshift_variant	45.97224482568171	0.3502073465782774	4				NaN	NaN	0	NaN	8977	3430	12405
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12410	32.613	NaN	3712.4	30	0	289.04	0.106			+	24106	LEKLGATLS	9	64	466.2768075858717	930.5390622385435	2	466.27630615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LEKLGATLS_	REV__ENSG00000086015|ENST00000361297|MAST2;REV__MAST2|p.R1274Dfs*9|1|0.49|ENSG00000086015|chr1:46034213-46034213|C/-|frameshift_variant;REV__nc|ENSG00000086015|Q6P0Q8-2|MAST2	115.49404669440601	0.023927554121326553	4				NaN	NaN	0	NaN	8978	3430	12405
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12411	32.615	NaN	3993.8	30	0	257.27	0.034	+			25384	LPHSATVTL	9	68	469.76917381969196	937.5237947061839	2	469.76873779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LPHSATVTL_	ENSG00000054611|ENST00000337137|TBC1D22A;nc|ENSG00000054611|Q8WUA7-3|TBC1D22A;nc|ENSG00000054611|Q8WUA7-4|TBC1D22A	51.33545320467046	0.2872990594074956	4				NaN	NaN	0	NaN	8979	3430	12405
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12412	32.615	NaN	7444.9	30	0	1220.7	0.138	+			14705	GTIGLTIAK	9	74	437.2735441822852	872.5325354313704	2	437.2735290527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GTIGLTIAK_	ENSG00000112992|ENST00000344920|NNT	112.41091882917199	0.026537921851008135	4				NaN	NaN	0	NaN	8980	3430	12405
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12425	32.645	NaN	6140.5	30	0	441.14	0.214			+	24987	LLEARSFS	8	67	461.7530264160505	NaN	0	461.75299072265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LLEARSFS_	REV__ENSG00000105219|ENST00000430325|CCNP	74.25504064058377	1.7418937515398478	4				NaN	NaN	0	NaN	8990	3433	12424
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12426	32.648	NaN	7531.2	30	0	1378.7	0.106	+			34859	RYSSMAASF	9	64	510.23445116502876	1018.4543493968575	2	510.2344970703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RYSSMAASF_	ENSG00000162366|ENST00000294338|PDZK1IP1	62.107414245175825	0.1960472003779324	4				NaN	NaN	0	NaN	8991	3433	12424
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12427	32.65	NaN	5300.7	30	0	1712.8	0.106			+	1248	AERPKVNFG	9	79	339.85479633538625	1016.5425596063587	3	339.8563537597656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AERPKVNFG_	REV__ENSG00000139915|ENST00000399232|MDGA2;REV__ENST00000557238.5_1_14:47341050-47530490:-|nuORF;REV__MDGA2|p.I945Lfs*8|1|0.13|ENSG00000139915|chr14:46841973-46841973|A/-|frameshift_variant;REV__nc|ENSG00000139915|Q7Z553-2|MDGA2;REV__nc|ENSG00000139915|Q7Z553|MDGA2	31.954861631926434	0.5046124803899898	4				NaN	NaN	0	NaN	8992	3433	12424
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12428	32.652	NaN	2244.9	30	0	126.88	0.106			+	25706	LRMSDLQIL	9	73	363.54127842034615	1087.6020058612385	3	363.5414123535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LRMSDLQIL_	REV__ADCY10|p.N1597Tfs*4|1|0.07|ENSG00000143199|chr1:167809721-167809721|T/-|frameshift_variant;REV__ADCY10|p.P1022Sfs*2|1|0.28|ENSG00000143199|chr1:167837262-167837263|-/A|frameshift_variant;REV__ENSG00000143199|ENST00000367851|ADCY10;REV__nc|ENSG00000143199|Q96PN6-2|ADCY10;REV__nc|ENSG00000143199|Q96PN6-4|ADCY10	40.05817265558897	0.419577045485086	4				NaN	NaN	0	NaN	8993	3433	12424
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12429	32.654	NaN	2196.2	30	0	285.5	0.106			+	-1	PFPPPGKPAM	10	58	527.7709123588699	1053.5272717845396	2	527.7699584960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_PFPPPGKPAM(Oxidation (M))_	REV__ENSG00000154305|ENST00000344922|MIA3;REV__nc|ENSG00000154305|Q5JRA6-2|MIA3;REV__nc|ENSG00000154305|Q5JRA6-4|MIA3	37.15910966729921	0.575322462179216	4				NaN	NaN	0	NaN	8994	3433	12424
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12430	32.656	NaN	1960.9	30	0	162.18	0.036	+			35094	SAFWLASRK	9	56	533.2960815624499	1064.5776101916997	2	533.2970581054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SAFWLASRK_	ENSG00000100330|ENST00000401950|MTMR3;ENST00000491251.1_1_22:30418516-30421787:+|nuORF;nc|ENSG00000100330|Q13615-2|MTMR3;nc|ENSG00000100330|Q13615-3|MTMR3	35.15202426646627	0.4747332964206883	4				NaN	NaN	0	NaN	8995	3433	12424
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12444	32.685	NaN	3791.5	30	0	1419.9	0.214	+			28626	NKVNVADIL	9	59	493.2878010092508	984.5610490853016	2	493.2872314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NKVNVADIL_	ANK2|p.D706N|1|0.26|ENSG00000145362|chr4:113287641-113287641|G/A|missense_variant	35.61828744233558	0.47037581924408073	4				NaN	NaN	0	NaN	9006	3436	12443
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12445	32.689	NaN	2751.5	30	0	401.3	0.106				-1	SVFGTMPLK	9	61	498.2653923705713	994.5162318079426	2	498.265380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_SVFGTM(Oxidation (M))PLK_	ENSG00000151348|ENST00000533608|EXT2;nc|ENSG00000151348|Q93063-2|EXT2;nc|ENSG00000151348|Q93063-3|EXT2	45.97224482568171	0.3502073465782774	4				NaN	NaN	0	NaN	9007	3436	12443
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12446	32.691	NaN	2480.7	30	0	499.39	0.037	+			28013	MWPSGIKHKA	10	60	577.8102786925117	NaN	0	577.8112182617188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MWPSGIKHKA_	ENST00000245543.5_1_17:73125797-73126031:+|nuORF	27.882242232435846	0.4086243523356342	4				NaN	NaN	0	NaN	9008	3436	12443
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12463	32.726	NaN	3157.7	30	0	242.23	0.214				-1	 	0	88	338.71035582043305	675.4061587076661	2	338.7105407714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9022	3439	12462
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12464	32.73	NaN	4627.4	30	0	561.66	0.106	+			19187	IYTNLNQKI	9	67	553.8143891712772	NaN	0	553.8145751953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IYTNLNQKI_	ENSG00000144036|ENST00000272427|EXOC6B;nc|ENSG00000144036|Q9Y2D4-2|EXOC6B	87.69643885390035	0.04624013146650493	4				NaN	NaN	0	NaN	9023	3439	12462
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12465	32.732	NaN	4799.8	30	0	738.84	0.106	+			35821	SECSISGTRK	10	59	534.2626977260145	1066.510842518829	2	534.2630615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SECSISGTRK_	ENST00000547003.1_1_12:49916566-49919899:+|nuORF	35.17822180527639	0.5925517082438457	4				NaN	NaN	0	NaN	9024	3439	12462
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12466	32.734	NaN	2070.3	30	0	433.46	0.03				-1	 	0	59	334.2222487248169	333.2149722582169	1	334.2224426269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9025	3439	12462
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12483	32.768	NaN	5202.5	30	0	1181.1	0.214	+			28174	NAPLVHATL	9	54	468.26949172095647	934.524430508713	2	468.26885986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAPLVHATL_	ENSG00000082898|ENST00000401558|XPO1;ENST00000428210.5_1_2:61720980-61752425:-|nuORF	66.42927471994793	0.16001998865088202	4				NaN	NaN	0	NaN	9039	3442	12482
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12484	32.772	NaN	3995.2	30	0	603.41	0.048				-1	 	0	57	622.0122124927636	NaN	0	622.012451171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9040	3442	12482
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12496	32.797	NaN	5473.5	30	0	384.27	0.214	+			23288	KYLYVDKNF	9	72	595.3164841052676	1188.618415277335	2	595.3162841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KYLYVDKNF_	ENSG00000100345|ENST00000216181|MYH9;MYH9|p.I784*|1|0.07|ENSG00000100345|chr22:36304036-36304036|G/-|frameshift_variant	76.16968421966216	0.11411088698345859	4				NaN	NaN	0	NaN	9049	3445	12495
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12497	32.801	NaN	4090.2	30	0	277.49	0.106	+			24061	LEIQHTTAL	9	71	513.2852188864783	1024.5558848397566	2	513.2847290039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LEIQHTTAL_	ENSG00000141569|ENST00000269383|TRIM65	67.49366992349736	0.1516260258713357	4				NaN	NaN	0	NaN	9050	3445	12495
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12498	32.803	NaN	7546.8	30	0	623.92	0.106	+			12529	GEFEKKYVATL	11	83	642.8460055384414	1283.6774581436828	2	642.8458862304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEFEKKYVATL_	ENSG00000132341|ENST00000543796|RAN	44.639436926238396	0.4944613868569842	4				NaN	NaN	0	NaN	9051	3445	12495
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12499	32.805	NaN	2503.5	30	0	146.85	0.106			+	-1	ADIEIHCGNM	10	80	392.50021476318	1174.47881488974	3	392.499755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_ADIEIHC(Carbamidomethyl (C))GNM(Oxidation (M))_	REV__ACACB|p.L1398Sfs*26|1|0.18|ENSG00000076555|chr12:109233795-109233795|C/-|frameshift_variant;REV__ACACB|p.T1476Hfs*7|1|0.28|ENSG00000076555|chr12:109235620-109235621|-/T|frameshift_variant;REV__ENSG00000076555|ENST00000338432|ACACB;REV__nc|ENSG00000076555|O00763-2|ACACB;REV__nc|ENSG00000076555|O00763-3|ACACB	21.68575002086885	0.7027366847906487	4				NaN	NaN	0	NaN	9052	3445	12495
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12500	32.807	NaN	2587.4	30	0	266.16	0.039	+			21127	KKSKEKYIDQ	10	58	633.8573608398438	NaN	0	633.8573608398438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KKSKEKYIDQ_	nc|ENSG00000205955|Q58FG0|HSP90AA5P	22.579656572578934	0.4201028297492154	4				NaN	NaN	0	NaN	9053	3445	12495
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12518	32.844	NaN	5486.6	30	0	1291.8	0.214	+			32556	QVTVEEHVF	9	69	544.2748789699075	1086.535205006615	2	544.2750244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QVTVEEHVF_	ENSG00000163376|ENST00000417314|KBTBD8;nc|ENSG00000163376|Q8NFY9-2|KBTBD8	53.351449002276354	0.2690372970092375	4				NaN	NaN	0	NaN	9068	3448	12517
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12519	32.848	NaN	3595.2	30	0	396.31	0.106			+	43067	TELLKSHL	8	63	470.7768942334035	939.539235533607	2	470.7763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TELLKSHL_	REV__EEA1|p.N1389Mfs*3|1|0.33|ENSG00000102189|chr12:92776081-92776081|T/-|frameshift_variant;REV__ENSG00000102189|ENST00000322349|EEA1	47.91560031466742	0.6071945918984287	4				NaN	NaN	0	NaN	9069	3448	12517
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12520	32.85	NaN	2789.6	30	0	308.44	0.106			+	2540	AQAGSLVAVF	10	64	481.76905619329466	961.5235594533893	2	481.7684631347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AQAGSLVAVF_	REV__PCDHGA8|p.L712Sfs*33|1|0.15|ENSG00000253767|chr5:141394944-141394945|-/T|frameshift_variant	35.61828744233558	0.588957954432594	4				NaN	NaN	0	NaN	9070	3448	12517
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12521	32.852	NaN	8777.1	30	0	929.75	0.106			+	20704	KGQTLETIYQL	11	81	647.3566376001445	1292.698722267089	2	647.3563842773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KGQTLETIYQL_	REV__ENST00000478296.5_1_3:75787041-75787971:-|nuORF	46.95498715874613	0.46277758983638906	4				NaN	NaN	0	NaN	9071	3448	12517
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12522	32.853	NaN	1563.5	30	0	203.3	0.036			+	11558	FPKSFLQQL	9	57	554.313720703125	NaN	0	554.313720703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FPKSFLQQL_	REV__ENSG00000198108|ENST00000305031|CHSY3	43.650786325866115	0.2504488100985368	4				NaN	NaN	0	NaN	9072	3448	12517
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12533	32.879	NaN	4613.6	30	0	523.75	0.214	+			27585	MPKMDQDSL	9	71	532.7410021071406	1063.4674512810811	2	532.7411499023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MPKMDQDSL_	ENSG00000079459|ENST00000220584|FDFT1;nc|ENSG00000079459|P37268-5|FDFT1	63.53385203322761	0.18415635464017938	4				NaN	NaN	0	NaN	9080	3451	12532
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12534	32.883	NaN	2820.1	30	0	294.11	0.106			+	24504	LGITGTVGAL	10	55	451.27128188644394	900.5280108396879	2	451.27117919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LGITGTVGAL_	REV__ENSG00000205592|ENST00000454784|MUC19;REV__nc|ENSG00000205592|Q7Z5P9-2|MUC19	42.396135135203025	0.5270658956260207	4				NaN	NaN	0	NaN	9081	3451	12532
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12535	32.885	NaN	5028.5	30	0	348.41	0.106	+			8399	EANQHELLY	9	64	558.7700285920847	1115.5255042509693	2	558.770751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EANQHELLY_	ENSG00000153029|ENST00000367580|MR1;ENST00000367578.1_1_1:181003164-181019478:+|nuORF;ENST00000438435.6_1_1:181006220-181024398:+|nuORF;MR1|p.P230Qfs*5|1|0.22|ENSG00000153029|chr1:181052314-181052314|C/-|frameshift_variant;nc|ENSG00000153029|Q95460-2|MR1;nc|ENSG00000153029|Q95460-3|MR1;nc|ENSG00000153029|Q95460-4|MR1;nc|ENSG00000153029|Q95460-5|MR1	76.7741389293348	0.11149722112137898	4				NaN	NaN	0	NaN	9082	3451	12532
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12536	32.887	NaN	3027.6	30	0	508.55	0.106			+	7839	DQLRTAPHW	9	58	562.2860735850685	NaN	0	562.28515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DQLRTAPHW_	REV__SMAD3|p.V331Rfs*31|1|0.42|ENSG00000166949|chr15:67184843-67184844|-/C|frameshift_variant	26.69291269510374	0.34280015626154364	4				NaN	NaN	0	NaN	9083	3451	12532
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12537	32.888	NaN	3524	30	0	436.85	0.106			+	32134	QSLNLDRSRQI	11	64	665.3648071289062	NaN	0	665.3648071289062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QSLNLDRSRQI_	REV__sp|P16785|LTP_HCMVALargetegumentproteindeneddylaseOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL48PE=1SV=1;REV__sp|Q6SW84|LTP_HCMVMLargetegumentproteindeneddylaseOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL48PE=3SV=1	30.568863376406313	0.42918353898720446	4				NaN	NaN	0	NaN	9084	3451	12532
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12538	32.89	NaN	4310.2	30	0	613.37	0.035			+	36696	SGREVKRLV	9	65	522.3175648871451	1042.62057684109	2	522.82080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SGREVKRLV_	REV__ENSG00000070061|ENST00000374647|ELP1	40.77816245573522	0.41113185337114944	4				NaN	NaN	0	NaN	9085	3451	12532
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12556	32.927	NaN	9678.6	30	0	1742.8	0.214	+			1316	AETELINRV	9	69	522.7866718011836	NaN	0	522.7876586914062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AETELINRV_	ENSG00000134215|ENST00000370056|VAV3;ENST00000343258.8_1_1:108115955-108328118:-|nuORF;ENST00000525460.5_1_1:108115955-108220600:-|nuORF;nc|ENSG00000134215|Q9UKW4-2|VAV3;nc|ENSG00000134215|Q9UKW4-3|VAV3;nc|ENSG00000134215|Q9UKW4-4|VAV3	93.1432384553994	0.0352600271724948	4				NaN	NaN	0	NaN	9100	3454	12555
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12557	32.93	NaN	4200.6	30	0	1369.4	0.106				-1	 	0	57	497.7795293258656	993.5445057185312	2	497.7791748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9101	3454	12555
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12558	32.933	NaN	4358.7	30	0	463.61	0.106			+	31683	QNKNIQEIL	9	66	550.3086608487612	NaN	0	550.3090209960938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QNKNIQEIL_	REV__ENSG00000052795|ENST00000264433|FNIP2;REV__FNIP2|p.M738Wfs*5|1|0.27|ENSG00000052795|chr4:158868842-158868842|A/-|frameshift_variant;REV__nc|ENSG00000052795|Q9P278-2|FNIP2	98.62937762414208	0.024200618960070384	4				NaN	NaN	0	NaN	9102	3454	12555
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12559	32.934	NaN	2964	30	0	356.68	0.106	+			47109	VLLVNDVHV	9	80	336.5342161156324	NaN	0	336.5341491699219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VLLVNDVHV_	TMEM74|p.V244Rfs*45|1|0.24|ENSG00000164841|chr8:108784370-108784371|-/C|frameshift_variant	20.481830146152948	0.3676602570045296	4				NaN	NaN	0	NaN	9103	3454	12555
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12560	32.936	NaN	2383.4	30	0	430.63	0.038			+	21319	KLTGVVVRWR	10	47	607.3799438476562	NaN	0	607.3799438476562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KLTGVVVRWR_	REV__ENST00000582275.5_1_17:46048501-46048661:+|nuORF	35.15202426646627	0.38475398474706135	4				NaN	NaN	0	NaN	9104	3454	12555
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12577	32.971	NaN	6900.6	30	0	1186.5	0.214			+	23396	LAAGSFHSIV	10	70	501.2746352368383	1000.5347175404767	2	501.27447509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LAAGSFHSIV_	REV__nc|ENSG00000127603|O94854-4|MACF1;REV__nc|ENSG00000127603|O94854|MACF1	55.50420428727701	0.4067289358710215	4				NaN	NaN	0	NaN	9118	3457	12576
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12578	32.974	NaN	2636.9	30	0	252.78	0.106				-1	LFTLNKGWM	9	63	563.291432087906	1124.5683112426118	2	563.7952880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LFTLNKGWM(Oxidation (M))_	ENST00000567209.2_1_16:28985574-28985997:-|nuORF	30.503639358989545	0.5181749237905803	4				NaN	NaN	0	NaN	9119	3457	12576
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12579	32.976	NaN	3496	30	0	454.74	0.106	+			51568	YYIPLVELV	9	66	554.8167019648997	1107.6188509965993	2	555.3178100585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YYIPLVELV_	ENSG00000165475|ENST00000298248|CRYL1;nc|ENSG00000165475|Q9Y2S2-2|CRYL1	42.396135135203025	0.392153681582562	4				NaN	NaN	0	NaN	9120	3457	12576
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12580	32.978	NaN	2497.7	30	0	304.76	0.034			+	6602	AYNVHVLD	8	53	465.73556218085565	929.4565714285113	2	465.7349853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AYNVHVLD_	REV__ENST00000529567.5_1_11:89372457-89431764:+|nuORF	38.80614096846853	0.6637206697844082	4				NaN	NaN	0	NaN	9121	3457	12576
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12598	33.013	NaN	8668.6	30	0	853.51	0.214	+			12618	GEIDGNKVTL	10	67	523.2819479800472	NaN	0	523.2811279296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEIDGNKVTL_	ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232319904-232323320:-|nuORF	65.15724298150197	0.19216335879263718	4				NaN	NaN	0	NaN	9136	3460	12597
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12599	33.017	NaN	8791.2	30	0	807.63	0.106	+			18126	ILFSLSQRK	9	73	546.332353157224	1090.650153381248	2	546.3326416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ILFSLSQRK_	ENSG00000205277|ENST00000536621|MUC12;nc|ENSG00000205277|Q9UKN1|MUC12	88.17693792209575	0.07000514020414955	4				NaN	NaN	0	NaN	9137	3460	12597
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12600	33.019	NaN	5061.5	30	0	740.84	0.106				-1	TSTMLLLVT	9	69	332.1883274300491	993.5431528903474	3	332.1883544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_TSTM(Oxidation (M))LLLVT_	ENST00000493312.6_1_X:1387742-1407416:+|nuORF	18.262085536374414	0.6112419832031293	4				NaN	NaN	0	NaN	9138	3460	12597
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12601	33.021	NaN	3598.5	30	0	1181.9	0.106			+	44527	TSVLAAER	8	60	423.73734128912224	845.4601296450445	2	423.7373962402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TSVLAAER_	REV__ENST00000335183.10_1_14:54863742-54863790:+|nuORF	45.9519527083369	0.6193794311207887	4				NaN	NaN	0	NaN	9139	3460	12597
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12602	33.022	NaN	3859.3	30	0	638.03	0.106			+	34852	RYSRVVKAPI	10	61	594.8639982549599	NaN	0	594.8641357421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RYSRVVKAPI_	REV__CCL21|p.K39R|1|0.32|ENSG00000137077|chr9:34709849-34709849|T/C|missense_variant;REV__ENSG00000137077|ENST00000259607|CCL21	27.882242232435846	0.4086243523356342	4				NaN	NaN	0	NaN	9140	3460	12597
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12603	33.024	NaN	2434	30	0	275.4	0.106				-1	 	0	59	478.28579022709897	477.278513760499	1	478.2847900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9141	3460	12597
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12604	33.026	NaN	3276.2	30	0	433.45	0.037	+			38161	SQAQATISFPK	11	66	589.3141238215173	1176.6136947098346	2	589.3153076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SQAQATISFPK_	CDC6|p.P86Lfs*17|1|0.14|ENSG00000094804|chr17:40291132-40291132|C/-|frameshift_variant;ENSG00000094804|ENST00000209728|CDC6	82.49433358170734	0.13157841501534762	4				NaN	NaN	0	NaN	9142	3460	12597
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12621	33.06	NaN	13058	30	0	6188.5	0.214	+			39566	STGHVGFIFK	10	82	364.8658472333375	1091.5757123002124	3	364.86602783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STGHVGFIFK_	ENSG00000137575|ENST00000260130|SDCBP;ENST00000523441.1_1_8:59490633-59492419:+|nuORF;nc|ENSG00000137575|O00560-2|SDCBP;nc|ENSG00000137575|O00560-3|SDCBP	31.529811441608018	0.6223461015008678	4				NaN	NaN	0	NaN	9156	3463	12620
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12622	33.064	NaN	4547.2	30	0	773.54	0.106	+			11538	FPFSAQSGAGV	11	64	534.2626977260145	1066.510842518829	2	534.7609252929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FPFSAQSGAGV_	ENSG00000185499|ENST00000620103|MUC1;ENST00000468978.2_1_1:155159604-155160306:-|nuORF;nc|ENSG00000185499|P15941-10|MUC1;nc|ENSG00000185499|P15941-11|MUC1;nc|ENSG00000185499|P15941-15|MUC1;nc|ENSG00000185499|P15941-17|MUC1;nc|ENSG00000185499|P15941-2|MUC1;nc|ENSG00000185499|P15941-3|MUC1;nc|ENSG00000185499|P15941-4|MUC1;nc|ENSG00000185499|P15941-6|MUC1;nc|ENSG00000185499|P15941-7|MUC1;nc|ENSG00000185499|P15941-8|MUC1;nc|ENSG00000185499|P15941|MUC1	31.068146907933308	0.6639116734509778	4				NaN	NaN	0	NaN	9157	3463	12620
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12623	33.066	NaN	5565.3	30	0	441	0.106	+			14677	GTIFGIYRK	9	73	527.8059012088922	1053.5972494845844	2	527.8060302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTIFGIYRK_	ENSG00000165140|ENST00000375326|FBP1;FBP1|p.G294Efs*11|1|0.11|ENSG00000165140|chr9:94603517-94603517|C/-|frameshift_variant	74.25504064058377	0.12238981753128622	4				NaN	NaN	0	NaN	9158	3463	12620
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12624	33.068	NaN	4215.9	30	0	725.08	0.106				-1	IPQCMHHPG	9	60	538.7425291033355	NaN	0	538.7428588867188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_IPQC(Carbamidomethyl (C))MHHPG_	ENST00000370331.5_1_1:93160934-93160991:-|nuORF	26.79610172149135	0.34227917631780574	4				NaN	NaN	0	NaN	9159	3463	12620
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12625	33.07	NaN	5250.6	30	0	703.19	0.038			+	-1	CQHDCGIYR	9	62	604.74853515625	NaN	0	604.74853515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))QHDC(Carbamidomethyl (C))GIYR_	REV__ENST00000525139.5_1_11:26669259-26669331:+|nuORF	27.882242232435846	0.3367954786602879	4				NaN	NaN	0	NaN	9160	3463	12620
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12642	33.102	NaN	28740	30	0	4797.9	0.214	+			41368	SVMELARLK	9	89	523.8049993671048	1045.5954458010094	2	523.8051147460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVMELARLK_	ENSG00000115649|ENST00000360507|CNPPD1	181.4070731898895	0.0011547877412507563	4				NaN	NaN	0	NaN	9174	3466	12641
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12643	33.106	NaN	3874.4	30	0	379.24	0.106			+	17359	IALGGASPGNP	11	54	477.2558661431477	952.4971793530955	2	477.2559509277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IALGGASPGNP_	REV__ENSG00000130669|ENST00000360442|PAK4;REV__nc|ENSG00000130669|O96013-3|PAK4;REV__nc|ENSG00000130669|O96013-4|PAK4	69.6276240434122	0.23884409287757344	4				NaN	NaN	0	NaN	9175	3466	12641
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12644	33.108	NaN	4610.6	30	0	1234.8	0.106	+			31587	QLSGREQEL	9	58	530.2749247914701	1058.53529664974	2	530.2747192382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QLSGREQEL_	ENSG00000058453|ENST00000375541|CROCC;ENST00000426910.1_1_X:134568027-134569581:+|nuORF;nc|ENSG00000058453|Q5TZA2-2|CROCC	26.69291269510374	0.5537881896960711	4				NaN	NaN	0	NaN	9176	3466	12641
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12645	33.109	NaN	3704.8	30	0	248.58	0.106			+	18216	INDNLVKLF	9	62	538.3109486555803	1074.6073443779605	2	538.310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_INDNLVKLF_	REV__DNAH3|p.E3315Dfs*37|1|0.1|ENSG00000158486|chr16:20963939-20963940|-/A|frameshift_variant;REV__DNAH3|p.G2194Efs*14|1|0.34|ENSG00000158486|chr16:20997303-20997303|C/-|frameshift_variant;REV__DNAH3|p.I2375Sfs*8|1|0.13|ENSG00000158486|chr16:20985619-20985619|T/-|frameshift_variant;REV__DNAH3|p.V2829Yfs*9|1|0.43|ENSG00000158486|chr16:20965399-20965399|C/-|frameshift_variant;REV__ENSG00000158486|ENST00000698260|DNAH3;REV__ENST00000572640.5_1_16:21008599-21073979:-|nuORF;REV__nc|ENSG00000158486|Q8TD57-3|DNAH3;REV__nc|ENSG00000158486|Q8TD57|DNAH3	47.657333605630114	0.33044192980041115	4				NaN	NaN	0	NaN	9177	3466	12641
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12646	33.111	NaN	5166.7	30	0	619.24	0.106			+	26246	LSSRSYIINWS	11	75	663.3431396484375	NaN	0	663.3431396484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSSRSYIINWS_	REV__ENST00000394534.6_2_7:91718825-91722482:+|nuORF	41.42661286455405	0.376895999158515	4				NaN	NaN	0	NaN	9178	3466	12641
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12647	33.113	NaN	1564.8	30	0	360.87	0.106			+	17888	IGDISTSQI	9	48	467.24839808097045	932.4822432287409	2	467.2478332519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IGDISTSQI_	REV__ENST00000299045.7_1_12:106740315-106740474:+|nuORF	40.77816245573522	0.41113185337114944	4				NaN	NaN	0	NaN	9179	3466	12641
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12648	33.115	NaN	3495.2	30	0	460.92	0.037				-1	RYALQMEQL	9	55	584.2953506834624	1166.5761484337247	2	584.295654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_RYALQM(Oxidation (M))EQL_	ENSG00000111057|ENST00000388835|KRT18;ENST00000411618.1_1_9:30799684-30799825:-|nuORF;ENST00000549078.5_1_12:53344429-53346127:+|nuORF	41.42661286455405	0.403525789677298	4				NaN	NaN	0	NaN	9180	3466	12641
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12665	33.146	NaN	4130.5	30	0	1389.5	0.214	+			14995	GTMTGMLYK	9	66	501.24302586939586	1000.4714988055918	2	501.24273681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTMTGMLYK_	ENSG00000178440|ENST00000651763|TIMM23B-AGAP6;ENSG00000204152|ENST00000651259|TIMM23B;ENSG00000265354|ENST00000580018|TIMM23;nc|ENSG00000204152|Q5SRD1-2|TIMM23B	79.71258880314673	0.09879134589249085	4				NaN	NaN	0	NaN	9194	3469	12664
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12666	33.149	NaN	3315.1	30	0	327.42	0.106	+			23561	LALDASQHSSL	11	72	571.2957445398595	1140.5769361465188	2	571.2965087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LALDASQHSSL_	ENSG00000113621|ENST00000358387|TXNDC15;nc|ENSG00000113621|Q96J42-2|TXNDC15	35.17822180527639	0.6208003396870814	4				NaN	NaN	0	NaN	9195	3469	12664
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12667	33.151	NaN	2549.5	30	0	420.5	0.106	+			8056	DVGDAGHN	8	79	392.6653963928795	NaN	0	392.6650390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DVGDAGHN_	DSPP|p.N1002Kfs*4|1|0.09|ENSG00000152591|chr4:87615665-87615666|-/A|frameshift_variant;ENSG00000152591|ENST00000651931|DSPP	26.79610172149135	1.7418937515398478	4				NaN	NaN	0	NaN	9196	3469	12664
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12668	33.153	NaN	2489.7	30	0	316.45	0.106			+	-1	MCNMAKAGMK	10	59	550.7389348158299	NaN	0	550.7586059570312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_M(Oxidation (M))CNMAKAGMK_	REV__PFKM|p.W686C|1|0.08|ENSG00000152556|chr12:48145096-48145096|G/T|missense_variant	35.61828744233558	0.3832230071539346	4				NaN	NaN	0	NaN	9197	3469	12664
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12669	33.155	NaN	2071	30	0	296.44	0.036			+	25095	LLNYLAHMM	9	53	553.2802734375	NaN	0	553.2802734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LLNYLAHMM_	REV__tr|U7T1G7|U7T1G7_FUSNUCinA-likeproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00638PE=3SV=1	31.954861631926434	0.3162336699109506	4				NaN	NaN	0	NaN	9198	3469	12664
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12681	33.18	NaN	24367	30	0	5042.1	0.214			+	50875	YFGNLTKVT	9	87	521.782205275098	1041.549857616996	2	521.7821044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YFGNLTKVT_	REV__ENSG00000155265|ENST00000370602|GOLGA7B	45.02220120713402	0.3613509778819777	4				NaN	NaN	0	NaN	9207	3472	12680
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12682	33.184	NaN	6990	30	0	1818.2	0.106	+			50376	WWPSESSF	8	51	513.2232985930937	1024.4320442529872	2	513.2228393554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WWPSESSF_	ENST00000228506.7_1_12:121134259-121134358:+|nuORF	42.47446043378293	0.6409579893742323	4				NaN	NaN	0	NaN	9208	3472	12680
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12683	33.186	NaN	6129.8	30	0	1014.8	0.106	+			37124	SITGFFQRK	9	66	542.3011677075923	1082.5877824819845	2	542.3013916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SITGFFQRK_	ENSG00000077514|ENST00000263681|POLD3;ENST00000530163.1_1_11:74340223-74351808:+|nuORF;nc|ENSG00000077514|Q15054-2|POLD3;nc|ENSG00000077514|Q15054-3|POLD3	88.17693792209575	0.07000514020414955	4				NaN	NaN	0	NaN	9209	3472	12680
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12684	33.188	NaN	4208	30	0	395.34	0.106	+			41369	SVMELARLK	9	64	523.8049993671048	1045.5954458010094	2	524.8071899414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVMELARLK_	ENSG00000115649|ENST00000360507|CNPPD1	61.691277971877994	0.19951612995419254	4				NaN	NaN	0	NaN	9210	3472	12680
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12685	33.19	NaN	3480.8	30	0	615.05	0.106	+			17762	IERYPEETL	9	58	575.2932751750765	1148.5719974169529	2	575.2933959960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IERYPEETL_	ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC;PRKDC|p.K3681Nfs*6|1|0.32|ENSG00000253729|chr8:47785174-47785177|TTCT/-|frameshift_variant;PRKDC|p.M3670*|1|0.5|ENSG00000253729|chr8:47785212-47785212|T/-|frameshift_variant;PRKDC|p.M3846Cfs*12|1|0.13|ENSG00000253729|chr8:47779047-47779047|T/-|frameshift_variant;PRKDC|p.M4020Cfs*2|1|0.31|ENSG00000253729|chr8:47776968-47776968|T/-|frameshift_variant;PRKDC|p.N3605Kfs*3|1|0.22|ENSG00000253729|chr8:47788993-47788994|-/T|frameshift_variant;PRKDC|p.N4037Ifs*15|1|0.17|ENSG00000253729|chr8:47776916-47776916|T/-|frameshift_variant;PRKDC|p.S4099Qfs*6|1|0.25|ENSG00000253729|chr8:47774265-47774265|A/-|frameshift_variant	49.536043120802724	0.308405419312776	4				NaN	NaN	0	NaN	9211	3472	12680
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12686	33.191	NaN	3823.6	30	0	315.3	0.106			+	-1	TMQHPAEL	8	62	471.7213863010713	941.4282196689426	2	471.7212829589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_TM(Oxidation (M))QHPAEL_	REV__ENSG00000186350|ENST00000481739|RXRA;REV__nc|ENSG00000186350|P19793-2|RXRA	32.81241826257853	0.7059802730411993	4				NaN	NaN	0	NaN	9212	3472	12680
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12687	33.193	NaN	2923.9	30	0	262.89	0.036			+	-1	CHMALVLPF	9	63	544.2748789699075	1086.535205006615	2	544.275146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_C(Carbamidomethyl (C))HMALVLPF_	REV__nc|ENSG00000101187|Q96BD0-3|SLCO4A1	29.841539824830324	0.5243625958137083	4				NaN	NaN	0	NaN	9213	3472	12680
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12705	33.23	NaN	4029.8	30	0	390.56	0.214	+			20204	KELESVSSF	9	60	513.2612741102097	1024.5079952872193	2	513.2613525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KELESVSSF_	ENSG00000100330|ENST00000401950|MTMR3;MTMR3|p.L605*|2|0.34|ENSG00000100330|chr22:30018059-30018059|C/-|frameshift_variant;MTMR3|p.S466Ifs*6|1|0.03|ENSG00000100330|chr22:30013433-30013434|-/ATTTG|frameshift_variant;nc|ENSG00000100330|Q13615-2|MTMR3;nc|ENSG00000100330|Q13615-3|MTMR3	82.7504851949679	0.08565546331141553	4				NaN	NaN	0	NaN	9228	3475	12704
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12706	33.234	NaN	3344.1	30	0	527.22	0.106	+			48469	VTLQQLHCLK	10	66	591.8368956950777	1181.6592384569553	2	591.8372192382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTLQQLHCLK_	ENST00000310613.7_1_4:70626187-70626241:-|nuORF	70.39856735676683	0.27406383984062843	4				NaN	NaN	0	NaN	9229	3475	12704
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12707	33.236	NaN	4061.1	30	0	457.46	0.037	+			24595	LGQCSPACIL	10	70	580.7751259087003	NaN	0	580.7753295898438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term),2 Carbamidomethyl (C)	_(Acetyl (Protein N-term))LGQC(Carbamidomethyl (C))SPAC(Carbamidomethyl (C))IL_	ENST00000548303.1_1_12:53818862-53819272:+|nuORF;ENST00000552233.5_1_12:53818904-53819473:+|nuORF	49.44154591367651	0.30913310806145605	4				NaN	NaN	0	NaN	9230	3475	12704
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12721	33.266	NaN	7815.7	30	0	1084.5	0.214	+			34870	RYTIVQQQI	9	71	574.824751585018	1147.634950236836	2	574.8248901367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RYTIVQQQI_	ENSG00000130640|ENST00000252936|TUBGCP2;nc|ENSG00000130640|Q9BSJ2-3|TUBGCP2;nc|ENSG00000130640|Q9BSJ2-4|TUBGCP2	78.26377905018397	0.10505600812668463	4				NaN	NaN	0	NaN	9241	3478	12720
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12722	33.269	NaN	3842	30	0	353.13	0.106	+			10091	ESKVQSFLASL	11	71	403.55547036117036	1207.644581683711	3	403.5556335449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ESKVQSFLASL_	ENSG00000197712|ENST00000358869|FAM114A1;FAM114A1|p.N333Mfs*3|1|0.32|ENSG00000197712|chr4:38922817-38922817|A/-|frameshift_variant;nc|ENSG00000197712|Q8IWE2-2|FAM114A1	23.52269567125451	0.7430573033454468	4				NaN	NaN	0	NaN	9242	3478	12720
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12723	33.271	NaN	2580.4	30	0	280.99	0.106	+			11214	FIAPTGHSL	9	59	471.7555569895883	941.4965610459766	2	471.75543212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FIAPTGHSL_	ENSG00000125354|ENST00000394610|SEPTIN6;ENSG00000138758|ENST00000264893|SEPTIN11;nc|ENSG00000125354|Q14141-3|SEPTIN6;nc|ENSG00000125354|Q14141-4|SEPTIN6;nc|ENSG00000125354|Q14141|SEPTIN6;nc|ENSG00000138758|Q9NVA2-2|SEPTIN11	38.80614096846853	0.43426287593479557	4				NaN	NaN	0	NaN	9243	3478	12720
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12724	33.273	NaN	1998.2	30	0	139.34	0.035			+	7134	DAAVTPQGLF	10	63	509.76331519768524	1017.5120774621705	2	509.7655944824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DAAVTPQGLF_	REV__ENST00000502875.1_1_4:141563950-141565549:-|nuORF	36.31764250033197	0.5830761606467809	4				NaN	NaN	0	NaN	9244	3478	12720
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12738	33.303	NaN	10411	30	0	4906	0.214	+			17704	IELSLKYD	8	78	327.51498695373823	979.5231314614148	3	327.5152282714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IELSLKYD_	tr|U7T681|U7T681_FUSNUHTHgntR-typedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00143PE=3SV=1	25.450171626174864	0.7628259754767981	4				NaN	NaN	0	NaN	9255	3481	12737
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12739	33.306	NaN	6521.8	30	0	568.5	0.106	+			42139	SYNPITHQL	9	75	536.7749719542567	1071.5353909753132	2	536.77490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SYNPITHQL_	ENSG00000163913|ENST00000348417|IFT122;ENST00000506507.5_1_3:129168750-129233481:+|nuORF;nc|ENSG00000163913|Q9HBG6-11|IFT122;nc|ENSG00000163913|Q9HBG6-3|IFT122;nc|ENSG00000163913|Q9HBG6-5|IFT122;nc|ENSG00000163913|Q9HBG6-6|IFT122	96.66504779109242	0.04607440320619715	4				NaN	NaN	0	NaN	9256	3481	12737
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12740	33.308	NaN	5440.8	30	0	1486.4	0.106	+			17756	IERAIGLKL	9	79	338.22168373965667	1011.6432218191701	3	338.2217712402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IERAIGLKL_	ENSG00000107223|ENST00000224073|EDF1	42.86426827375447	0.38666266728046506	4				NaN	NaN	0	NaN	9257	3481	12737
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12741	33.31	NaN	3893.6	30	0	956.73	0.106				-1	 	0	66	405.71629419752264	809.4180354618453	2	405.7162780761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9258	3481	12737
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12742	33.312	NaN	5458.4	30	0	409.04	0.106	+			17339	IAIKQTPEL	9	72	506.8055853246462	1011.5966177160924	2	506.8056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IAIKQTPEL_	ADAMDEC1|p.K341Rfs*7|1|0.55|ENSG00000134028|chr8:24400173-24400173|A/-|frameshift_variant;ENSG00000134028|ENST00000256412|ADAMDEC1	99.01295224348159	0.040209060045561164	4				NaN	NaN	0	NaN	9259	3481	12737
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12743	33.314	NaN	3662.2	30	0	449.07	0.037	+			1109	AELKMTGNCL	10	67	568.7760511557458	NaN	0	568.7754516601562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_AELKMTGNC(Carbamidomethyl (C))L_	ENSG00000113460|ENST00000336767|BRIX1;ENST00000510960.5_1_5:34915843-34922894:+|nuORF	51.52775601994872	0.29594378441454594	4				NaN	NaN	0	NaN	9260	3481	12737
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12744	33.314	NaN	5324.4	30	0	468.61	0.142			+	24278	LEVSLTREIT	10	71	580.8301389675677	1159.6457250019353	2	580.8304443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LEVSLTREIT_	REV__ENSG00000109819|ENST00000264867|PPARGC1A;REV__ENST00000509642.5_1_4:23822235-23883683:-|nuORF;REV__ENST00000509702.5_1_4:23766811-23826805:-|nuORF;REV__nc|ENSG00000109819|Q9UBK2-3|PPARGC1A;REV__nc|ENSG00000109819|Q9UBK2-4|PPARGC1A;REV__nc|ENSG00000109819|Q9UBK2-5|PPARGC1A;REV__nc|ENSG00000109819|Q9UBK2-8|PPARGC1A;REV__nc|ENSG00000109819|Q9UBK2-9|PPARGC1A	72.87924865735499	0.25379688738724415	4				NaN	NaN	0	NaN	9261	3481	12737
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12760	33.354	NaN	59207	30	0	11114	0.215	+			41575	SVQGAALVQIK	11	94	557.3352878051738	1112.6560226771476	2	557.3352661132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVQGAALVQIK_	chr16:1980544-1980641|439|11.94|0.64|4.22|-|ENST00000566005|NOXO1,NOXO1;chr16:1980728-1980939|449|16.41|0.86|4.26|-|ENST00000566005|NOXO1,NOXO1;ENSG00000196408|ENST00000356120|NOXO1;nc|ENSG00000196408|Q8NFA2-2|NOXO1;nc|ENSG00000196408|Q8NFA2-4|NOXO1;nc|ENSG00000196408|Q8NFA2|NOXO1	231.07048910418706	4.794824351363897E-18	4				NaN	NaN	0	NaN	9274	3484	12759
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12761	33.358	NaN	4166.6	30	0	980.82	0.106			+	46796	VHPTLSCN	8	63	435.7110191563157	NaN	0	435.7110595703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VHPTLSCN_	REV__ENSG00000081842|ENST00000529310|PCDHA6;REV__nc|ENSG00000081842|Q9UN73-2|PCDHA6;REV__nc|ENSG00000081842|Q9UN73-3|PCDHA6;REV__PCDHA6|p.Q756Rfs*27|1|0.21|ENSG00000081842|chr5:140830355-140830355|G/-|frameshift_variant	47.91560031466742	1.7418937515398478	4				NaN	NaN	0	NaN	9275	3484	12759
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12762	33.36	NaN	2624.7	30	0	311.53	0.037			+	26843	LVVHPDLIES	10	60	561.3122055282315	NaN	0	561.312744140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LVVHPDLIES_	REV__ENSG00000108559|ENST00000573584|NUP88;REV__ENST00000574867.5_1_17:5292093-5322970:-|nuORF	44.116797842482775	0.3427969396372342	4				NaN	NaN	0	NaN	9276	3484	12759
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12763	33.361	NaN	2047.7	30	0	571.53	0.14	+			38210	SQGDSNPA	8	61	388.1629456370784	774.3113383409568	2	388.1632080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SQGDSNPA_	ENSG00000168092|ENST00000527958|PAFAH1B2;ENST00000533206.1_1_11:117023163-117034692:+|nuORF;nc|ENSG00000168092|P68402-2|PAFAH1B2;nc|ENSG00000168092|P68402-3|PAFAH1B2;nc|ENSG00000168092|P68402-4|PAFAH1B2;PAFAH1B2|p.S64Pfs*6|1|0.28|ENSG00000168092|chr11:117161158-117161158|T/-|frameshift_variant	34.172542307311794	0.6954784234644539	4				NaN	NaN	0	NaN	9277	3484	12759
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12779	33.396	NaN	13360	30	0	1791.9	0.214	+			14827	GTLIDNQFK	9	79	518.2768824041902	1034.5392118751804	2	518.2771606445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTLIDNQFK_	ENSG00000018610|ENST00000644802|STEEP1;ENST00000469448.1_1_X:118673692-118676584:-|nuORF;nc|ENSG00000018610|Q9H5V9-2|STEEP1;nc|ENSG00000018610|Q9H5V9-3|STEEP1	126.24258497203832	0.01742065577488747	4				NaN	NaN	0	NaN	9290	3487	12778
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12780	33.4	NaN	3486.1	30	0	300.39	0.106	+			48427	VTIVMHIYK	9	65	552.318196549014	1102.621840164828	2	552.3178100585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTIVMHIYK_	ENST00000579289.1_1_17:56428811-56428850:-|nuORF	104.74654710444128	0.034358562718640136	4				NaN	NaN	0	NaN	9291	3487	12778
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12781	33.402	NaN	6041.1	30	0	487.92	0.106			+	50094	WGPSRRCRSRR	11	86	708.8792223024773	1415.7438916717545	2	709.3773803710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_WGPSRRCRSRR_	REV__ENST00000341184.6_1_22:39853353-39853542:+|nuORF	25.06778042989391	0.7268506242977556	4				NaN	NaN	0	NaN	9292	3487	12778
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12782	33.404	NaN	2578	30	0	256.16	0.106			+	51137	YNKVTAAY	8	55	465.2394714355469	NaN	0	465.2394714355469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YNKVTAAY_	REV__ENSG00000135622|ENST00000357877|SEMA4F;REV__ENST00000420077.5_1_2:74885065-74901680:+|nuORF	35.200714571348534	1.7418937515398478	4				NaN	NaN	0	NaN	9293	3487	12778
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12783	33.406	NaN	5405.4	30	0	612.49	0.106	+			4927	ATQMVRMILK	10	73	595.8408695364953	1189.6671861397906	2	595.8409423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATQMVRMILK_	ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5	80.91624569148213	0.18813531420570515	4				NaN	NaN	0	NaN	9294	3487	12778
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12784	33.407	NaN	2995.5	30	0	416.9	0.036	+			34253	RTGRTKFNI	9	65	546.8154907226562	NaN	0	546.8154907226562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RTGRTKFNI_	HERV35I-int_dup77|chr3:106541134-106546233:+|1.3860853119714591|0.1976016791882729|2.81|468.0|93|2|sense	32.81241826257853	0.3119040447479903	4				NaN	NaN	0	NaN	9295	3487	12778
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12800	33.441	NaN	7938.6	30	0	1301.8	0.214	+			10785	FAHDDSVMY	9	63	542.7241082765821	1083.4336636199641	2	542.72412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FAHDDSVMY_	ENSG00000065183|ENST00000349139|WDR3;WDR3|p.A919Cfs*2|1|0.38|ENSG00000065183|chr1:117959363-117959364|-/T|frameshift_variant	45.9519527083369	0.35044536499095585	4				NaN	NaN	0	NaN	9308	3490	12799
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12801	33.445	NaN	6225.4	30	0	839.68	0.106	+			25141	LLSDKATSPL	10	71	522.8007919955401	1043.58703105788	2	522.8007202148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LLSDKATSPL_	ENSG00000130529|ENST00000252826|TRPM4;ENST00000596338.5_1_19:49685858-49692185:+|nuORF;nc|ENSG00000130529|Q8TD43-2|TRPM4;nc|ENSG00000130529|Q8TD43-3|TRPM4;TRPM4|p.F902Sfs*22|1|0.3|ENSG00000130529|chr19:49200356-49200356|T/-|frameshift_variant;TRPM4|p.W1124Gfs*5|1|0.32|ENSG00000130529|chr19:49210750-49210751|GT/-|frameshift_variant	51.52775601994872	0.4429225830406686	4				NaN	NaN	0	NaN	9309	3490	12799
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12802	33.447	NaN	6461.8	30	0	1523	0.106			+	2120	ALHQDDLLA	9	61	498.26188130472786	994.5092096762558	2	498.26153564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ALHQDDLLA_	REV__ENSG00000100258|ENST00000474879|LMF2;REV__ENST00000514938.1_1_22:50943733-50944613:-|nuORF;REV__nc|ENSG00000100258|Q9BU23-2|LMF2;REV__nc|ENSG00000100258|Q9BU23-3|LMF2	65.80317337860623	0.1652391959156183	4				NaN	NaN	0	NaN	9310	3490	12799
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12803	33.449	NaN	8429.6	30	0	1237.3	0.106			+	29213	NVSDPLQIQLQ	11	81	627.8383227230361	1253.662092512872	2	627.8382568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NVSDPLQIQLQ_	REV__ENST00000469445.1_1_2:27263203-27263702:+|nuORF	62.107414245175825	0.30464354921554965	4				NaN	NaN	0	NaN	9311	3490	12799
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12804	33.45	NaN	6707.8	30	0	958.46	0.106	+			15310	GTVDVTPFIKK	11	79	602.8504611220313	1203.6863693108626	2	602.8502807617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTVDVTPFIKK_	ENSG00000198408|ENST00000361464|OGA;nc|ENSG00000198408|O60502-2|OGA;nc|ENSG00000198408|O60502-4|OGA	93.44185321454538	0.08468467990978058	4				NaN	NaN	0	NaN	9312	3490	12799
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12805	33.452	NaN	2122.8	30	0	203.16	0.033	+			47860	VSLGISIVGG	10	54	451.27112646619645	900.5276999991929	2	451.2712097167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VSLGISIVGG_	ENSG00000132849|ENST00000642238|PATJ;ENST00000459752.5_1_1:62228564-62579919:+|nuORF;ENST00000484562.5_1_1:62228564-62579919:+|nuORF;nc|ENSG00000132849|Q8NI35-2|PATJ;nc|ENSG00000132849|Q8NI35-3|PATJ;nc|ENSG00000132849|Q8NI35-4|PATJ;nc|ENSG00000132849|Q8NI35-5|PATJ;nc|ENSG00000132849|Q8NI35|PATJ	84.9155231211612	0.16018353804806162	4				NaN	NaN	0	NaN	9313	3490	12799
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12806	33.453	NaN	3025.4	30	0	246.46	0.139	+			23422	LACGVAKVL	9	65	465.7759551844919	929.5373574357839	2	465.7760314941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_LAC(Carbamidomethyl (C))GVAKVL_	ENSG00000265972|ENST00000582401|TXNIP	63.30626980617807	0.18605348971131092	4				NaN	NaN	0	NaN	9314	3490	12799
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12822	33.488	NaN	25501	30	0	5091.5	0.215	+			15117	GTQSFVFQR	9	78	535.275148974381	1068.5357450155618	2	535.275146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTQSFVFQR_	ENSG00000147955|ENST00000277010|SIGMAR1;ENST00000378892.5_1_9:34637493-34637721:-|nuORF;ENST00000497006.1_1_9:34637208-34637655:-|nuORF;nc|ENSG00000147955|Q99720-3|SIGMAR1;nc|ENSG00000147955|Q99720-4|SIGMAR1	209.1949250693894	5.5435209957013866E-08	4				NaN	NaN	0	NaN	9327	3493	12821
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12823	33.492	NaN	3088.8	30	0	535.19	0.106	+			24072	LEKCSVFQCLL	11	65	641.8305053710938	NaN	0	641.8305053710938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LEKCSVFQCLL_	ENSG00000164327|ENST00000357387|RICTOR;nc|ENSG00000164327|Q6R327-3|RICTOR;RICTOR|p.S1495Pfs*13|1|0.05|ENSG00000164327|chr5:38945642-38945643|-/ATTCTGGG|frameshift_variant	31.634271133179894	0.4244354679066847	4				NaN	NaN	0	NaN	9328	3493	12821
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12824	33.494	NaN	2900	30	0	395.59	0.106	+			1392	AEVNQETIQRL	11	68	650.8450317382812	NaN	0	650.8450317382812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEVNQETIQRL_	ENSG00000008324|ENST00000011691|SS18L2	44.6138410219848	0.3540041363020411	4				NaN	NaN	0	NaN	9329	3493	12821
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12825	33.496	NaN	1971.5	30	0	154.1	0.106			+	-1	GLLLSDMAQ	9	61	482.2436783056733	NaN	0	482.24395751953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_GLLLSDM(Oxidation (M))AQ_	REV__ENSG00000107290|ENST00000224140|SETX;REV__nc|ENSG00000107290|Q7Z333-3|SETX;REV__nc|ENSG00000107290|Q7Z333-4|SETX;REV__SETX|p.F1748Sfs*3|1|0.55|ENSG00000107290|chr9:132326355-132326355|A/-|frameshift_variant;REV__SETX|p.G1134Efs*24|1|0.34|ENSG00000107290|chr9:132328199-132328199|T/-|frameshift_variant;REV__SETX|p.G1252Dfs*9|2|0.2|ENSG00000107290|chr9:132327843-132327843|C/-|frameshift_variant;REV__SETX|p.I2020Nfs*4|1|0.32|ENSG00000107290|chr9:132295919-132295920|-/T|frameshift_variant;REV__SETX|p.N1361Ifs*53|1|0.11|ENSG00000107290|chr9:132327516-132327516|T/-|frameshift_variant;REV__SETX|p.S1600*|1|0.07|ENSG00000107290|chr9:132326800-132326801|-/A|frameshift_variant;REV__SETX|p.T2478Sfs*35|1|0.35|ENSG00000107290|chr9:132264836-132264840|TATGG/-|frameshift_variant	47.657333605630114	0.2228375344433429	4				NaN	NaN	0	NaN	9330	3493	12821
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12826	33.498	NaN	3130.5	30	0	419.3	0.036	+			18313	IPTKQTQIF	9	66	538.3109486555803	1074.6073443779605	2	538.3106079101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IPTKQTQIF_	ENSG00000204388|ENST00000375650|HSPA1B;ENSG00000204389|ENST00000375651|HSPA1A;ENSG00000204390|ENST00000375654|HSPA1L;nc|ENSG00000204389|P0DMV8-2|HSPA1A	49.44154591367651	0.3095138337212152	4				NaN	NaN	0	NaN	9331	3493	12821
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12840	33.528	NaN	11276	30	0	1894.1	0.214	+			5793	AVHDITVAY	9	76	494.75888850321564	987.5032240732313	2	494.7587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVHDITVAY_	ENSG00000172954|ENST00000379509|LCLAT1;nc|ENSG00000172954|Q6UWP7|LCLAT1	63.30626980617807	0.18605348971131092	4				NaN	NaN	0	NaN	9342	3496	12839
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12841	33.531	NaN	3982.6	30	0	670.27	0.106			+	7717	DLSERVASLK	10	68	559.3143568716562	1116.6141608101123	2	559.3147583007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DLSERVASLK_	REV__ENSG00000140993|ENST00000396862|TIGD7;REV__nc|ENSG00000140993|Q6NT04-2|TIGD7	40.05817265558897	0.5486090488315611	4				NaN	NaN	0	NaN	9343	3496	12839
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12842	33.534	NaN	3429.8	30	0	379.14	0.106	+			19032	IYAGGIKSI	9	63	461.27380338166824	NaN	0	461.2740478515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IYAGGIKSI_	ENSG00000124067|ENST00000316341|SLC12A4;ENST00000573023.6_1_16:67984709-67996179:-|nuORF;nc|ENSG00000124067|Q9UP95-2|SLC12A4;nc|ENSG00000124067|Q9UP95-3|SLC12A4;nc|ENSG00000124067|Q9UP95-4|SLC12A4;nc|ENSG00000124067|Q9UP95-5|SLC12A4;nc|ENSG00000124067|Q9UP95-6|SLC12A4;nc|ENSG00000124067|Q9UP95-7|SLC12A4	77.31757898189308	0.08057531075035683	4				NaN	NaN	0	NaN	9344	3496	12839
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12843	33.535	NaN	4088.2	30	0	1216.4	0.037			+	-1	TMKHMGIVNV	10	69	382.53257513454287	1144.5758960038286	3	382.5330810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_TM(Oxidation (M))KHMGIVNV_	REV__ENSG00000115524|ENST00000335508|SF3B1	30.568863376406313	0.6301935916953115	4				NaN	NaN	0	NaN	9345	3496	12839
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12859	33.569	NaN	8565	30	0	616.81	0.214	+			980	AEKELVQSL	9	69	508.7848838530734	1015.5552147729468	2	508.7846374511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEKELVQSL_	ENSG00000072682|ENST00000360568|P4HA2;ENST00000478055.1_1_5:131553347-131562829:-|nuORF;nc|ENSG00000072682|O15460|P4HA2	131.61620852596164	0.014413238321579053	4				NaN	NaN	0	NaN	9358	3499	12858
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12860	33.573	NaN	5255.3	30	0	649.37	0.106	+			20006	KEIGDIAGV	9	68	451.25296619869755	900.4913794641951	2	451.25286865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEIGDIAGV_	ENSG00000137947|ENST00000370500|GTF2B	63.53385203322761	0.18415635464017938	4				NaN	NaN	0	NaN	9359	3499	12858
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12861	33.575	NaN	3705.8	30	0	508.91	0.106				-1	KIAMIMTMI	9	65	542.2845659682772	1082.5545790033543	2	542.284423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Oxidation (M)	_KIAM(Oxidation (M))IM(Oxidation (M))TMI_	ENST00000280377.9_1_12:62798090-62798126:+|nuORF	29.14955571784316	0.5308295550522326	4				NaN	NaN	0	NaN	9360	3499	12858
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12862	33.577	NaN	3193.8	30	0	557.25	0.106	+			9873	EQHFPEVML	9	65	565.2696533203125	NaN	0	565.2696533203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EQHFPEVML_	ENSG00000146021|ENST00000309755|KLHL3;ENST00000504496.5_1_5:136997591-137028142:-|nuORF;ENST00000510529.1_1_5:137013137-137034053:-|nuORF;ENST00000515334.5_1_5:137008460-137041741:-|nuORF;nc|ENSG00000146021|Q9UH77-2|KLHL3;nc|ENSG00000146021|Q9UH77-3|KLHL3	34.172542307311794	0.30503706118289736	4				NaN	NaN	0	NaN	9361	3499	12858
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12863	33.579	NaN	1739.1	30	0	232.09	0.106			+	20944	KKCISCVIT	9	60	332.18448016710124	NaN	0	332.18463134765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KKCISCVIT_	REV__ENSG00000134744|ENST00000257177|TUT4;REV__nc|ENSG00000134744|Q5TAX3|TUT4	31.954861631926434	0.3162336699109506	4				NaN	NaN	0	NaN	9362	3499	12858
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12864	33.58	NaN	3678.3	30	0	372.99	0.036			+	27892	MTPAAPLLPLP	11	65	560.826166952417	NaN	0	560.8258056640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MTPAAPLLPLP_	REV__ENST00000587535.3_1_19:14492251-14508118:+|nuORF	29.550750289552195	0.43372083775723597	4				NaN	NaN	0	NaN	9363	3499	12858
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12879	33.612	NaN	9215.6	30	0	1958.1	0.214			+	-1	LSKHQSCP	8	69	478.73505312531694	955.4555533174339	2	478.7347412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_LSKHQSC(Carbamidomethyl (C))P_	REV__ENST00000442675.1_1_9:5041269-5041823:+|nuORF	57.81127852772723	0.5234495074909924	4				NaN	NaN	0	NaN	9375	3502	12878
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12880	33.616	NaN	5956.4	30	0	443.48	0.106	+			44999	TVEDVFLRK	9	71	553.8141202837809	1105.6136876343617	2	553.8142700195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVEDVFLRK_	ENSG00000062582|ENST00000317534|MRPS24	87.69643885390035	0.07135982304947239	4				NaN	NaN	0	NaN	9376	3502	12878
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12881	33.618	NaN	5218.1	30	0	462.87	0.106	+			14774	GTKYIFMVK	9	74	543.8046100553962	1085.5946671775923	2	543.8043823242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTKYIFMVK_	ENSG00000101871|ENST00000317552|MID1;nc|ENSG00000101871|O15344-2|MID1	53.59686742100583	0.26699147868981316	4				NaN	NaN	0	NaN	9377	3502	12878
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12882	33.62	NaN	5441.1	30	0	710.14	0.106	+			33732	RPITDSPVL	9	65	499.28783017585715	996.5611074185143	2	499.2716979980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RPITDSPVL_	ENSG00000038274|ENST00000321757|MAT2B;nc|ENSG00000038274|Q9NZL9-2|MAT2B	70.8162118820467	0.13725933411854815	4				NaN	NaN	0	NaN	9378	3502	12878
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12883	33.622	NaN	2500.6	30	0	392.84	0.106	+			11072	FETEPVSKL	9	63	525.279541015625	NaN	0	525.279541015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FETEPVSKL_	ENSG00000198087|ENST00000359314|CD2AP	47.657333605630114	0.2228375344433429	4				NaN	NaN	0	NaN	9379	3502	12878
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12884	33.623	NaN	1867.3	30	0	261.04	0.032			+	-1	WCCSCCSSGC	10	64	384.77173388041695	NaN	0	384.77197265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Carbamidomethyl (C)	_WCCSCC(Carbamidomethyl (C))SSGC(Carbamidomethyl (C))_	REV__ENST00000228741.7_1_12:96588285-96617411:+|nuORF	1.8869224993972666	0.4201028297492154	4				NaN	NaN	0	NaN	9380	3502	12878
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12897	33.651	NaN	6010.1	30	0	479.52	0.214	+			28762	NPDTHSWEM	9	72	558.7246167114	1115.4346804896	2	558.7245483398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NPDTHSWEM_	ENSG00000143569|ENST00000428931|UBAP2L;nc|ENSG00000143569|Q14157-1|UBAP2L;nc|ENSG00000143569|Q14157-3|UBAP2L;nc|ENSG00000143569|Q14157-4|UBAP2L;nc|ENSG00000143569|Q14157-5|UBAP2L	64.20726635412375	0.17854274437659667	4				NaN	NaN	0	NaN	9390	3505	12896
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12898	33.655	NaN	3431.4	30	0	828.66	0.106			+	10284	ETMLDTFE	8	58	493.2115608804633	984.4085688277266	2	493.21136474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ETMLDTFE_	REV__ENSG00000164050|ENST00000296440|PLXNB1;REV__ENSG00000198753|ENST00000361971|PLXNB3;REV__ENST00000485535.5_1_3:48445895-48454598:-|nuORF;REV__nc|ENSG00000164050|O43157-2|PLXNB1;REV__nc|ENSG00000198753|Q9ULL4-2|PLXNB3;REV__PLXNB3|p.V1655Cfs*7|1|0.56|ENSG00000198753|chrX:153777236-153777236|G/-|frameshift_variant	33.51558372728122	0.7005509609380386	4				NaN	NaN	0	NaN	9391	3505	12896
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12899	33.657	NaN	2810.9	30	0	468.97	0.037	+			50286	WSACSKTCGMG	11	51	565.7232055664062	NaN	0	565.7232055664062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_WSACSKTCGMG_	ENSG00000118523|ENST00000367976|CCN2;nc|ENSG00000118523|P29279-2|CCN2	19.1035232394073	0.456735970842152	4				NaN	NaN	0	NaN	9392	3505	12896
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12914	33.688	NaN	16982	30	0	1330.4	0.215	+			43064	TELLIRKL	8	84	493.3240766708449	984.6336004084898	2	493.32342529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TELLIRKL_	ENSG00000132475|ENST00000254810|H3-3B;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000168148|ENST00000366696|H3-4;ENSG00000183598|ENST00000331491|H3C13;ENSG00000188375|ENST00000340398|H3-5;ENSG00000197153|ENST00000359303|H3C12;ENSG00000197409|ENST00000356476|H3C4;ENSG00000203811|ENST00000369158|H3C14;ENSG00000203852|ENST00000403683|H3C15;ENSG00000273983|ENST00000614378|H3C8;ENSG00000274750|ENST00000614911|H3C6;ENSG00000275379|ENST00000616365|H3C11;ENSG00000275714|ENST00000613854|H3C1;ENSG00000277775|ENST00000618052|H3C7;ENSG00000278828|ENST00000685041|H3C10;ENST00000401004.2_1:120904811-120905087:+|nuORF;ENST00000497682.1_1_3:109128527-109128830:-|nuORF;ENST00000586518.1_1_17:73774674-73775034:-|nuORF;nc|ENSG00000273213|Q5TEC6|H3-7	108.08749611321984	0.24621691167378246	4				NaN	NaN	0	NaN	9404	3508	12913
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12915	33.692	NaN	4732.2	30	0	1357.1	0.037	+			10760	FAFVCHPEVL	10	71	581.2906894930294	NaN	0	581.2896118164062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FAFVCHPEVL_	ENSG00000017483|ENST00000620913|SLC38A5;ENSG00000139209|ENST00000266579|SLC38A4;ENSG00000188338|ENST00000614032|SLC38A3;ENST00000417121.2_1_3:50255369-50255834:+|nuORF;nc|ENSG00000017483|Q8WUX1-2|SLC38A5;SLC38A3|p.I469Sfs*13|1|0.24|ENSG00000188338|chr3:50219971-50219971|C/-|frameshift_variant	35.61828744233558	0.3832230071539346	4				NaN	NaN	0	NaN	9405	3508	12913
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12927	33.717	NaN	95683	30	0	30711	0.214	+			6688	AYVHMVTHF	9	125	368.84786278939896	1103.5217589683969	3	368.8488464355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AYVHMVTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	79.9392285194092	0.09781135437301468	4				NaN	NaN	0	NaN	9414	3511	12926
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12928	33.721	NaN	3527	30	0	389.51	0.106			+	36546	SFISSKSN	8	72	435.2223004422177	NaN	0	435.2223815917969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SFISSKSN_	REV__ENSG00000196876|ENST00000627620|SCN8A;REV__nc|ENSG00000196876|Q9UQD0-3|SCN8A;REV__nc|ENSG00000196876|Q9UQD0-4|SCN8A;REV__nc|ENSG00000196876|Q9UQD0-5|SCN8A;REV__nc|ENSG00000196876|Q9UQD0|SCN8A	35.61828744233558	1.7418937515398478	4				NaN	NaN	0	NaN	9415	3511	12926
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12929	33.723	NaN	3852.7	30	0	470.69	0.106			+	10148	ESSIRPVPL	9	58	499.28783017585715	996.5611074185143	2	499.28759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ESSIRPVPL_	REV__ENST00000305366.7_1_3:149095461-149095638:-|nuORF	56.43379154798735	0.2433427591689151	4				NaN	NaN	0	NaN	9416	3511	12926
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12930	33.725	NaN	8808.6	30	0	672.47	0.106	+			6693	AYVHMVTHF	9	83	552.7685509160293	1103.5225488988585	2	552.768310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AYVHMVTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	148.20599733432147	0.007287282186870133	4				NaN	NaN	0	NaN	9417	3511	12926
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12931	33.727	NaN	2006.7	30	0	216.17	0.106			+	24541	LGLLKPPQP	9	56	481.8051129526571	NaN	0	481.8047180175781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LGLLKPPQP_	REV__AluSz6_dup43940|chr19:17814301-17814610:-|3.685936671004459|0.3287952390102888|3.49|483.0|18|3|anti-sense	47.91560031466742	0.22105767942158736	4				NaN	NaN	0	NaN	9418	3511	12926
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12932	33.728	NaN	2309.6	30	0	203.29	0.037				-1	TLLCEDGCLA	10	61	576.2564086914062	NaN	0	576.2564086914062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Carbamidomethyl (C)	_TLLC(Carbamidomethyl (C))EDGC(Carbamidomethyl (C))LA_	ENSG00000143839|ENST00000272190|REN;nc|ENSG00000143839|P00797-2|REN	29.14955571784316	0.4044631218331212	4				NaN	NaN	0	NaN	9419	3511	12926
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12949	33.763	NaN	34619	30	0	5912.4	0.214			+	33237	RGAAFMAF	8	102	435.71786380502425	869.4211746768485	2	435.7181091308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RGAAFMAF_	REV__tr|U7SXB4|U7SXB4_FUSNUTransketolaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00935PE=4SV=1	46.76643321282427	0.6143254112625767	4				NaN	NaN	0	NaN	9433	3514	12948
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12950	33.766	NaN	58981	30	0	15359	0.106	+			51482	YVHMVTHF	8	87	517.2499940855001	1032.4854352378002	2	517.249755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YVHMVTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	173.84880674471344	0.1335488238516059	4				NaN	NaN	0	NaN	9434	3514	12948
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12951	33.769	NaN	8592	30	0	581.74	0.106	+			10188	ETAVKELSY	9	80	520.2692800043799	1038.5240070755597	2	520.2691040039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ETAVKELSY_	C5|p.W1228Gfs*21|1|0.25|ENSG00000106804|chr9:120976882-120976882|A/-|frameshift_variant;CON__Q1A7A4;ENSG00000106804|ENST00000223642|C5	108.08749611321984	0.03094949498378333	4				NaN	NaN	0	NaN	9435	3514	12948
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12952	33.77	NaN	23002	30	0	18577	0.106	+			25208	LMLAVYYDS	9	58	537.7615882467926	1073.508623560385	2	537.7620239257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LMLAVYYDS_	ENSG00000260691|ENST00000562196|ANKRD20A1;ENST00000427650.2_1_9:69386004-69400453:+|nuORF;ENST00000432432.6_1_2:95480778-95522914:-|nuORF;nc|ENSG00000172014|Q4UJ75|ANKRD20A4P;nc|ENSG00000229089|Q5CZ79|ANKRD20A8P;nc|ENSG00000276203|Q5VUR7|ANKRD20A3P;nc|ENSG00000291287|Q5SQ80|ANKRD20A2P	28.2542754592877	0.5391964248700117	4				NaN	NaN	0	NaN	9436	3514	12948
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12953	33.772	NaN	3543.1	30	0	526.63	0.106				-1	 	0	82	329.0050752845465	NaN	0	329.21820068359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9437	3514	12948
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12954	33.774	NaN	3445	30	0	382.5	0.106	+			49798	VYSKDQLQTF	10	58	614.8145751953125	NaN	0	614.8145751953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VYSKDQLQTF_	ENSG00000115073|ENST00000289228|ACTR1B;ENSG00000138107|ENST00000369905|ACTR1A;ENST00000418944.1_1_2:110941632-110941998:+|nuORF;ENST00000451664.1_1_2:98275340-98280353:-|nuORF;ENST00000460427.2_1_2:98275340-98276060:-|nuORF;ENST00000480947.1_1_10:104243895-104247966:-|nuORF	37.50817390946774	0.3770175549877019	4				NaN	NaN	0	NaN	9438	3514	12948
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12955	33.776	NaN	5153	30	0	2190.7	0.045			+	43159	TETGAGFMDTV	11	59	564.7477984329525	NaN	0	564.7470092773438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TETGAGFMDTV_	REV__ENSG00000108242|ENST00000285979|CYP2C18;REV__nc|ENSG00000108242|P33260-2|CYP2C18	24.519189625965996	0.45614437233802635	4				NaN	NaN	0	NaN	9439	3514	12948
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12972	33.806	NaN	4055.7	30	0	342.33	0.144			+	33450	RILSTVPCY	9	66	526.284283297212	NaN	0	526.2841186523438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RILSTVPCY_	REV__ENST00000298198.4_1_11:74043464-74043653:-|nuORF	38.80614096846853	0.28164298475537564	4				NaN	NaN	0	NaN	9453	3517	12971
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12986	33.835	NaN	12011	30	0	1246.2	0.214	+			15541	GVDSSIFQNPK	11	78	596.3039248856334	1190.5932968380666	2	596.805908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVDSSIFQNPK_	ENSG00000138303|ENST00000672957|ASCC1;nc|ENSG00000138303|Q8N9N2|ASCC1	166.0711670676379	3.86703434003832E-05	4				NaN	NaN	0	NaN	9464	3520	12985
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12987	33.839	NaN	5103.6	30	0	605.85	0.106			+	-1	YGPKCAGESF	10	70	558.24455412881	1114.47455532442	2	558.2435913085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_YGPKC(Carbamidomethyl (C))AGESF_	REV__ENSG00000126091|ENST00000347631|ST3GAL3;REV__ENST00000461375.1_1_1:44280573-44366462:+|nuORF;REV__nc|ENSG00000126091|Q11203-10|ST3GAL3;REV__nc|ENSG00000126091|Q11203-11|ST3GAL3;REV__nc|ENSG00000126091|Q11203-12|ST3GAL3;REV__nc|ENSG00000126091|Q11203-13|ST3GAL3;REV__nc|ENSG00000126091|Q11203-14|ST3GAL3;REV__nc|ENSG00000126091|Q11203-15|ST3GAL3;REV__nc|ENSG00000126091|Q11203-16|ST3GAL3;REV__nc|ENSG00000126091|Q11203-17|ST3GAL3;REV__nc|ENSG00000126091|Q11203-18|ST3GAL3;REV__nc|ENSG00000126091|Q11203-19|ST3GAL3;REV__nc|ENSG00000126091|Q11203-2|ST3GAL3;REV__nc|ENSG00000126091|Q11203-20|ST3GAL3;REV__nc|ENSG00000126091|Q11203-22|ST3GAL3;REV__nc|ENSG00000126091|Q11203-23|ST3GAL3;REV__nc|ENSG00000126091|Q11203-24|ST3GAL3;REV__nc|ENSG00000126091|Q11203-3|ST3GAL3;REV__nc|ENSG00000126091|Q11203-4|ST3GAL3;REV__nc|ENSG00000126091|Q11203-5|ST3GAL3;REV__nc|ENSG00000126091|Q11203-6|ST3GAL3;REV__nc|ENSG00000126091|Q11203-8|ST3GAL3;REV__nc|ENSG00000126091|Q11203-9|ST3GAL3	34.172542307311794	0.6007644933930345	4				NaN	NaN	0	NaN	9465	3520	12985
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	12988	33.841	NaN	2937.7	30	0	234.75	0.035			+	50537	YAREITIVG	9	68	511.2875829869557	1020.5606130407115	2	511.7529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YAREITIVG_	REV__ENSG00000157765|ENST00000382051|SLC34A2;REV__nc|ENSG00000157765|O95436-2|SLC34A2	32.81241826257853	0.4965981579233955	4				NaN	NaN	0	NaN	9466	3520	12985
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13004	33.873	NaN	5980.6	30	0	834.95	0.214	+			27515	MNQNLDIY	8	71	505.73406951158023	1009.4535860899605	2	505.73431396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MNQNLDIY_	ENSG00000169814|ENST00000643237|BTD;ENST00000482824.1_1_3:15676934-15683645:+|nuORF;nc|ENSG00000169814|P43251-2|BTD;nc|ENSG00000169814|P43251-3|BTD;nc|ENSG00000169814|P43251|BTD	55.50420428727701	0.5462892107279674	4				NaN	NaN	0	NaN	9479	3523	13003
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13005	33.877	NaN	5978.3	30	0	456.06	0.106				-1	CMDFNFMGGSM	11	80	672.7221951187381	1343.4298373042761	2	672.7205810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),3 Oxidation (M)	_C(Carbamidomethyl (C))M(Oxidation (M))DFNFM(Oxidation (M))GGSM(Oxidation (M))_	tr|U7SZV2|U7SZV2_FUSNUAcetyl-coenzymeAcarboxylasecarboxyltransferasesubunitbetaOS=FusobacteriumnucleatumCTI-5OX=1316586GN=accDPE=3SV=1	20.83715455343099	0.7712264395190968	4				NaN	NaN	0	NaN	9480	3523	13003
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13006	33.879	NaN	3647.1	30	0	384.5	0.106			+	1848	AIKITYNKG	9	83	336.534223652868	NaN	0	336.5338134765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AIKITYNKG_	REV__ENSG00000162733|ENST00000367921|DDR2	31.954861631926434	0.3162336699109506	4				NaN	NaN	0	NaN	9481	3523	13003
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13007	33.881	NaN	3389.7	30	0	208.95	0.038			+	50161	WLAAGLRAPHY	11	79	627.838070918887	1253.6615889045738	2	627.8378295898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_WLAAGLRAPHY_	REV__nc|ENSG00000213402|Q14761|PTPRCAP	53.351449002276354	0.38280258784255455	4				NaN	NaN	0	NaN	9482	3523	13003
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13024	33.916	NaN	3710.9	30	0	544.9	0.214	+			17771	IESNHPIVL	9	59	511.2875829869557	1020.5606130407115	2	511.287353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IESNHPIVL_	ENSG00000065150|ENST00000651721|IPO5;ENST00000493122.1_1_13:98671845-98673393:+|nuORF;nc|ENSG00000065150|O00410-2|IPO5;nc|ENSG00000065150|O00410-3|IPO5	79.71258880314673	0.09879134589249085	4				NaN	NaN	0	NaN	9496	3526	13023
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13025	33.919	NaN	2321	30	0	425.65	0.106	+			49757	VYPPPHQVF	9	69	542.2845659682772	1082.5545790033543	2	542.2850341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYPPPHQVF_	ENSG00000076248|ENST00000242576|UNG;ENST00000540158.1_1_12:109535484-109537104:+|nuORF;nc|ENSG00000076248|P13051-2|UNG	26.79610172149135	0.5528238334041078	4				NaN	NaN	0	NaN	9497	3526	13023
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13026	33.921	NaN	2653.4	30	0	354.3	0.106			+	-1	CKSECKQECKP	11	57	670.2925415039062	NaN	0	670.2925415039062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_CKSECKQEC(Carbamidomethyl (C))KP_	REV__ENSG00000203784|ENST00000368747|LELP1	20.030474535948922	0.456735970842152	4				NaN	NaN	0	NaN	9498	3526	13023
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13027	33.923	NaN	3031.5	30	0	290.48	0.106			+	-1	IKGCTKCEYLK	11	72	700.356689453125	NaN	0	700.356689453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_IKGC(Carbamidomethyl (C))TKC(Carbamidomethyl (C))EYLK_	REV__ZFP30|p.K218T|1|0.34|ENSG00000120784|chr19:37635888-37635888|T/G|missense_variant	21.68575002086885	0.456735970842152	4				NaN	NaN	0	NaN	9499	3526	13023
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13028	33.925	NaN	1946.2	30	0	250.43	0.037				-1	ICYLAVAYPL	10	51	591.8138427734375	NaN	0	591.8138427734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_IC(Carbamidomethyl (C))YLAVAYPL_	ENST00000519795.1_1_5:167656748-167657962:-|nuORF	26.79610172149135	0.4121907004225123	4				NaN	NaN	0	NaN	9500	3526	13023
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13044	33.958	NaN	56473	30	0	9369.7	0.214	+			6583	AYLHTTTTF	9	86	527.7638086779873	1053.5130644227745	2	527.7640991210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AYLHTTTTF_	ABCC3|p.L968Afs*31|1|0.33|ENSG00000108846|chr17:50675920-50675921|-/G|frameshift_variant;ENSG00000108846|ENST00000285238|ABCC3;ENST00000502426.5_1_17:48736553-48755440:+|nuORF;nc|ENSG00000108846|O15438-2|ABCC3;nc|ENSG00000108846|O15438-4|ABCC3;nc|ENSG00000108846|O15438-5|ABCC3	167.82442114527325	0.0031382784359891723	4				NaN	NaN	0	NaN	9513	3529	13043
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13045	33.961	NaN	5754	30	0	693.16	0.106	+			25877	LSFSPLPGNI	10	72	522.7899133582567	1043.5652737833134	2	522.7901000976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSFSPLPGNI_	ENSG00000121753|ENST00000373658|ADGRB2;ENST00000465256.5_1_1:32193589-32201220:-|nuORF;ENST00000530999.1_1_1:32193023-32200902:-|nuORF;nc|ENSG00000121753|O60241-2|ADGRB2;nc|ENSG00000121753|O60241-3|ADGRB2;nc|ENSG00000121753|O60241-4|ADGRB2	67.49366992349736	0.29779660154124327	4				NaN	NaN	0	NaN	9514	3529	13043
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13046	33.963	NaN	6241.4	30	0	1955.1	0.106	+			32620	QYNPKFQTL	9	70	569.7985571528409	1137.5825613724817	2	569.7985229492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QYNPKFQTL_	ENSG00000116580|ENST00000368331|GON4L;ENSG00000163374|ENST00000355499|YY1AP1;ENST00000436865.5_1_1:155629450-155649007:-|nuORF;ENST00000496324.5_1_1:155642327-155650230:-|nuORF;GON4L|p.E1831Rfs*8|1|0.18|ENSG00000116580|chr1:155756984-155756985|-/T|frameshift_variant;GON4L|p.P1077Lfs*24|1|0.34|ENSG00000116580|chr1:155766243-155766243|G/-|frameshift_variant;nc|ENSG00000116580|Q3T8J9-2|GON4L;nc|ENSG00000116580|Q3T8J9-3|GON4L;nc|ENSG00000163374|Q9H869-3|YY1AP1;nc|ENSG00000163374|Q9H869-4|YY1AP1;nc|ENSG00000163374|Q9H869-5|YY1AP1;nc|ENSG00000163374|Q9H869-6|YY1AP1;nc|ENSG00000163374|Q9H869-8|YY1AP1;nc|ENSG00000163374|Q9H869-9|YY1AP1;nc|ENSG00000163374|Q9H869|YY1AP1	74.25504064058377	0.12238981753128622	4				NaN	NaN	0	NaN	9515	3529	13043
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13047	33.965	NaN	5565	30	0	1157.7	0.106			+	36174	SELHSGTLL	9	65	478.75600630819486	955.4974596831897	2	478.7557373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SELHSGTLL_	REV__ENST00000607809.5_1_12:54472874-54474119:-|nuORF	53.351449002276354	0.2690372970092375	4				NaN	NaN	0	NaN	9516	3529	13043
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13048	33.967	NaN	4923.5	30	0	1096.1	0.106	+			4644	ATLPPITVTSK	11	63	564.3373804880268	1126.6602080428536	2	564.337158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATLPPITVTSK_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	51.52775601994872	0.4002081502334604	4				NaN	NaN	0	NaN	9517	3529	13043
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13049	33.969	NaN	3612.5	30	0	416.11	0.106			+	34875	RYTPDSLLT	9	68	533.282207939104	1064.5498629450078	2	533.2825927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RYTPDSLLT_	REV__ENSG00000168439|ENST00000305218|STIP1;REV__nc|ENSG00000168439|P31948-2|STIP1;REV__nc|ENSG00000168439|P31948-3|STIP1	51.33545320467046	0.2872990594074956	4				NaN	NaN	0	NaN	9518	3529	13043
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13050	33.971	NaN	2431.4	30	0	602.61	0.036			+	-1	ISCPGAKRR	9	58	348.8623964638335	1043.5653599917005	3	348.86224365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_ISC(Carbamidomethyl (C))PGAKRR_	REV__ENST00000560078.1_1_15:41100333-41100738:+|nuORF	39.252832667884924	0.4290233611298554	4				NaN	NaN	0	NaN	9519	3529	13043
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13067	34.005	NaN	3040.9	30	0	353.3	0.214			+	21628	KPRRSFTPY	9	64	576.3178451017508	1150.6211372703015	2	576.3185424804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KPRRSFTPY_	REV__ENSG00000150637|ENST00000582621|CD226	47.657333605630114	0.33044192980041115	4				NaN	NaN	0	NaN	9533	3532	13066
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13068	34.009	NaN	5279	30	0	572.99	0.106	+			41372	SVMEVNSGIYR	11	77	627.8105825929829	1253.6066122527657	2	627.810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVMEVNSGIYR_	ENSG00000187522|ENST00000378372|HSPA14	73.84112541714126	0.20371746787051248	4				NaN	NaN	0	NaN	9534	3532	13066
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13069	34.011	NaN	5371.6	30	0	1067.2	0.106			+	51408	YTQFIMCVA	9	68	538.2508895866463	1074.4872262400925	2	539.743896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YTQFIMCVA_	REV__ENSG00000066135|ENST00000372396|KDM4A;REV__KDM4A|p.K699Sfs*7|1|0.06|ENSG00000066135|chr1:43690902-43690902|A/-|frameshift_variant;REV__nc|ENSG00000066135|O75164-2|KDM4A	30.503639358989545	0.5181749237905803	4				NaN	NaN	0	NaN	9535	3532	13066
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13070	34.013	NaN	4681.2	30	0	600.98	0.106	+			6607	AYQKQPTIF	9	72	548.2932395794809	NaN	0	548.2955932617188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AYQKQPTIF_	ENSG00000142534|ENST00000270625|RPS11;ENST00000599167.5_1_19:49999677-50000690:+|nuORF;ENST00000600027.5_1_19:49999677-50000944:+|nuORF	62.107414245175825	0.1403307765918332	4				NaN	NaN	0	NaN	9536	3532	13066
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13071	34.014	NaN	5137.7	30	0	503.9	0.106			+	43658	TITLTRNDKD	10	68	588.8145619935123	NaN	0	588.8145751953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TITLTRNDKD_	REV__tr|U7SXW9|U7SXW9_FUSNUChaperoneproteinHtpGOS=FusobacteriumnucleatumCTI-5OX=1316586GN=htpGPE=3SV=1	52.936696900407355	0.28703625529470256	4				NaN	NaN	0	NaN	9537	3532	13066
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13072	34.016	NaN	2872.6	30	0	452.91	0.106				-1	QGVLLFVVHC	10	53	586.3182983398438	NaN	0	586.3182983398438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_QGVLLFVVHC(Carbamidomethyl (C))_	ENST00000600751.6_2_19:6953206-6957198:-|nuORF;nc|ENSG00000268758|Q86SQ3|ADGRE4P	30.503639358989545	0.4000169810673414	4				NaN	NaN	0	NaN	9538	3532	13066
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13073	34.018	NaN	2994.6	30	0	469.35	0.038			+	6912	CLVYQGAQRPD	11	53	625.3016357421875	NaN	0	625.3016357421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_CLVYQGAQRPD_	REV__ENSG00000157927|ENST00000399583|RADIL;REV__nc|ENSG00000157927|Q96JH8-1|RADIL;REV__RADIL|p.G882Wfs*32|2|0.35|ENSG00000157927|chr7:4801852-4801853|-/G|frameshift_variant;REV__RADIL|p.P881Lfs*110|4|0.34|ENSG00000157927|chr7:4801853-4801853|G/-|frameshift_variant	25.57405402267927	0.45144328854727944	4				NaN	NaN	0	NaN	9539	3532	13066
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13092	34.054	NaN	17663	30	0	2953.9	0.214	+			45497	TYDSVTDKF	9	77	538.2508895866463	1074.4872262400925	2	538.2507934570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TYDSVTDKF_	ENSG00000115464|ENST00000398571|USP34;ENST00000463046.5_1_2:61463458-61483580:-|nuORF;nc|ENSG00000115464|Q70CQ2-2|USP34;nc|ENSG00000115464|Q70CQ2-3|USP34;USP34|p.L2716Sfs*30|1|0.05|ENSG00000115464|chr2:61214596-61214597|-/AAGCTGA|frameshift_variant;USP34|p.L3228*|1|0.22|ENSG00000115464|chr2:61190564-61190564|A/-|frameshift_variant	134.7655990226056	0.012935733000282069	4				NaN	NaN	0	NaN	9555	3535	13091
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13093	34.057	NaN	9432.6	30	0	1579.4	0.106	+			45630	TYQQVQQTL	9	74	554.7859004795963	1107.5572480259925	2	554.7855834960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TYQQVQQTL_	ENSG00000126254|ENST00000262633|RBM42;nc|ENSG00000126254|Q9BTD8-2|RBM42;nc|ENSG00000126254|Q9BTD8-3|RBM42;nc|ENSG00000126254|Q9BTD8-4|RBM42	89.02883481214508	0.06760336634167786	4				NaN	NaN	0	NaN	9556	3535	13091
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13094	34.059	NaN	8014.5	30	0	791.69	0.106	+			36046	SEISNIARV	9	85	494.77513550795834	987.5357180827167	2	494.7746887207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEISNIARV_	ENSG00000016490|ENST00000394711|CLCA1	129.42129120953632	0.01549634589885217	4				NaN	NaN	0	NaN	9557	3535	13091
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13095	34.061	NaN	10239	30	0	1021	0.106	+			23791	LCLSTEFTV	9	68	506.7542137056891	1011.4938744781782	2	506.75396728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LCLSTEFTV_	ENST00000400181.8_1_1:23381567-23381600:+|nuORF	25.57405402267927	0.5642445186134241	4				NaN	NaN	0	NaN	9558	3535	13091
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13096	34.063	NaN	7024.1	30	0	1369.2	0.106			+	51362	YTDRLGAM	8	63	463.72372032656847	925.432887719937	2	463.7234191894531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YTDRLGAM_	REV__ENSG00000152253|ENST00000282074|SPC25;REV__ENST00000472216.2_1_2:169741394-169769722:-|nuORF	42.47446043378293	0.6409579893742323	4				NaN	NaN	0	NaN	9559	3535	13091
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13097	34.065	NaN	5582.9	30	0	1010.4	0.106				-1	SESMSTVKK	9	63	338.1714087264162	1011.4923967794487	3	338.17156982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_SESM(Oxidation (M))STVKK_	ENST00000467592.5_1_7:23387225-23387369:-|nuORF;ENST00000497563.5_1_7:23385645-23387369:-|nuORF	25.57405402267927	0.5642445186134241	4				NaN	NaN	0	NaN	9560	3535	13091
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13098	34.067	NaN	2837.4	30	0	421.41	0.036				-1	ARACCACYC	9	59	531.6868487045771	1061.359144475954	2	531.687255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))ARAC(Carbamidomethyl (C))CACYC_	ENST00000546332.1_1_X:15288045-15288583:-|nuORF	25.450171626174864	0.5654022654467333	4				NaN	NaN	0	NaN	9561	3535	13091
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13114	34.1	NaN	78470	30	0	38121	0.212	+			6689	AYVHMVTHF	9	114	368.84786278939896	1103.5217589683969	3	368.8480529785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AYVHMVTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	92.19062340807069	0.05868925795948219	4				NaN	NaN	0	NaN	9574	3538	13113
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13115	34.103	NaN	8938.2	30	0	1226.6	0.106	+			15623	GVLAWVKEK	9	73	515.3085170493566	1028.6024811655132	2	515.3082275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GVLAWVKEK_	ENSG00000008517|ENST00000525643|IL32;nc|ENSG00000008517|P24001-3|IL32;nc|ENSG00000008517|P24001-5|IL32;nc|ENSG00000008517|P24001-6|IL32;nc|ENSG00000008517|P24001-7|IL32;nc|ENSG00000008517|P24001|IL32	110.11987700582712	0.028875675806141952	4				NaN	NaN	0	NaN	9575	3538	13113
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13116	34.105	NaN	8484.6	30	0	3935.1	0.106				-1	VGCIKNILI	9	83	343.8745591427452	NaN	0	343.8745422363281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_VGC(Carbamidomethyl (C))IKNILI_	ENSG00000116704|ENST00000235345|SLC35D1;nc|ENSG00000116704|Q9NTN3-2|SLC35D1	27.882242232435846	0.3367954786602879	4				NaN	NaN	0	NaN	9576	3538	13113
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13117	34.107	NaN	11246	30	0	1032	0.106	+			34793	RYLEGTSCI	9	71	521.255463988744	1040.496375044288	2	521.255615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RYLEGTSCI_	ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1	85.16082228582465	0.07850854922700509	4				NaN	NaN	0	NaN	9577	3538	13113
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13118	34.109	NaN	4919	30	0	366.36	0.106	+			6694	AYVHMVTHF	9	64	552.7685509160293	1103.5225488988585	2	552.7689819335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AYVHMVTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	110.33723246496265	0.028653888678955353	4				NaN	NaN	0	NaN	9578	3538	13113
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13119	34.111	NaN	2268.4	30	0	268.2	0.038	+			28938	NRNVLKRELG	10	59	599.8562878825637	1197.6980228319273	2	599.856201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NRNVLKRELG_	ENSG00000142623|ENST00000375471|PADI1	36.31764250033197	0.5830761606467809	4				NaN	NaN	0	NaN	9579	3538	13113
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13133	34.14	NaN	15960	30	0	2421.6	0.214	+			50968	YIHVGAQL	8	80	450.75036035384215	899.4861677744843	2	450.7503356933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YIHVGAQL_	ENSG00000176658|ENST00000318217|MYO1D	114.5961677871614	0.2422812628153066	4				NaN	NaN	0	NaN	9590	3541	13132
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13134	34.144	NaN	1964.4	30	0	385.17	0.106	+			30903	QEKVQSALV	9	58	501.2851153310789	1000.5556777289578	2	501.2847595214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QEKVQSALV_	SLC37A4|p.G256V|1|0.08|ENSG00000137700|chr11:119026954-119026954|C/A|missense_variant	24.519189625965996	0.574102787014149	4				NaN	NaN	0	NaN	9591	3541	13132
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13135	34.146	NaN	3471.1	30	0	535.44	0.106	+			36427	SETTQIVKL	9	65	509.79267765506734	1017.5708023769347	2	509.79241943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SETTQIVKL_	ENSG00000068885|ENST00000326448|IFT80;ENST00000472773.5_1_3:160075355-160102388:-|nuORF;ENST00000477495.5_1_3:160091401-160102388:-|nuORF;IFT80|p.V685Sfs*8|1|0.22|ENSG00000068885|chr3:160277352-160277356|CAAGG/-|frameshift_variant;nc|ENSG00000068885|Q9P2H3-3|IFT80	69.6276240434122	0.14239879520340665	4				NaN	NaN	0	NaN	9592	3541	13132
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13136	34.148	NaN	3455.4	30	0	440.96	0.106				-1	TRGCELPPYC	10	81	626.7774717720708	1251.5403906109416	2	626.7776489257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_TRGC(Carbamidomethyl (C))ELPPYC(Carbamidomethyl (C))_	ENST00000415183.6_1_19:1371251-1376572:+|nuORF;ENST00000591433.5_1_19:1358605-1371443:+|nuORF	39.252832667884924	0.5560298534376815	4				NaN	NaN	0	NaN	9593	3541	13132
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13137	34.15	NaN	1890.1	30	0	256.36	0.106			+	31202	QGRGRGLLV	9	50	478.2949427633912	954.5753325935824	2	478.2947998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QGRGRGLLV_	REV__GLUD2|p.A28V|1|0.71|ENSG00000182890|chrX:121047767-121047767|C/T|missense_variant	30.503639358989545	0.5181749237905803	4				NaN	NaN	0	NaN	9594	3541	13132
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13138	34.151	NaN	1422.1	30	0	90.089	0.034				-1	LGGIGTMVVT	10	61	482.2610927673021	NaN	0	482.2608947753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_LGGIGTM(Oxidation (M))VVT_	tr|U7T3M6|U7T3M6_FUSNUZinctransportsystempermeaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00355PE=3SV=1	35.61828744233558	0.3832230071539346	4				NaN	NaN	0	NaN	9595	3541	13132
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13151	34.178	NaN	5862	30	0	588.37	0.214	+			827	AEGEIYTKL	9	73	512.2718827003869	1022.5292124675738	2	512.271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEGEIYTKL_	ENSG00000138190|ENST00000260762|EXOC6;EXOC6|p.L640Ffs*39|1|0.37|ENSG00000138190|chr10:92974192-92974193|-/T|frameshift_variant;nc|ENSG00000138190|Q8TAG9-2|EXOC6	106.68306549817024	0.032382560583716295	4				NaN	NaN	0	NaN	9605	3544	13150
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13152	34.182	NaN	4164.8	30	0	424.99	0.106	+			40420	STVHEILCK	9	73	564.789706351223	1127.564859769246	2	564.7904052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))STVHEILC(Carbamidomethyl (C))K_	ENSG00000182718|ENST00000451270|ANXA2;ENST00000557937.5_1_15:60655071-60678274:-|nuORF;ENST00000558985.5_1_15:60656692-60690187:-|nuORF;ENST00000559725.5_1_15:60656692-60682421:-|nuORF;nc|ENSG00000182718|P07355-2|ANXA2;nc|ENSG00000231991|A6NMY6|ANXA2P2;NPTN-ANXA2|1|fusion	51.19269402634007	0.2889735674168909	4				NaN	NaN	0	NaN	9606	3544	13150
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13153	34.184	NaN	6462.5	30	0	495.96	0.106	+			39649	STIEYVIQR	9	74	554.8039300577473	1107.5933071822944	2	555.7928466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STIEYVIQR_	ENSG00000101310|ENST00000650089|SEC23B	69.6276240434122	0.14239879520340665	4				NaN	NaN	0	NaN	9607	3544	13150
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13154	34.186	NaN	2956.1	30	0	389.48	0.106	+			43065	TELLIRKL	8	72	493.3240766708449	984.6336004084898	2	493.3235168457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TELLIRKL_	ENSG00000132475|ENST00000254810|H3-3B;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000168148|ENST00000366696|H3-4;ENSG00000183598|ENST00000331491|H3C13;ENSG00000188375|ENST00000340398|H3-5;ENSG00000197153|ENST00000359303|H3C12;ENSG00000197409|ENST00000356476|H3C4;ENSG00000203811|ENST00000369158|H3C14;ENSG00000203852|ENST00000403683|H3C15;ENSG00000273983|ENST00000614378|H3C8;ENSG00000274750|ENST00000614911|H3C6;ENSG00000275379|ENST00000616365|H3C11;ENSG00000275714|ENST00000613854|H3C1;ENSG00000277775|ENST00000618052|H3C7;ENSG00000278828|ENST00000685041|H3C10;ENST00000401004.2_1:120904811-120905087:+|nuORF;ENST00000497682.1_1_3:109128527-109128830:-|nuORF;ENST00000586518.1_1_17:73774674-73775034:-|nuORF;nc|ENSG00000273213|Q5TEC6|H3-7	51.33545320467046	0.5859736979383976	4				NaN	NaN	0	NaN	9608	3544	13150
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13155	34.188	NaN	4177.5	30	0	782.54	0.106	+			34883	RYVMTTTTL	9	57	543.2868101126294	1084.5590672920587	2	543.286376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RYVMTTTTL_	ENSG00000134001|ENST00000256383|EIF2S1	60.11826168202944	0.21262886028301267	4				NaN	NaN	0	NaN	9609	3544	13150
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13156	34.19	NaN	2019.8	30	0	180.08	0.106				-1	 	0	58	435.71786380502425	869.4211746768485	2	435.7176208496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9610	3544	13150
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13157	34.191	NaN	2353.8	30	0	410.91	0.035			+	17174	HTNLVLATM	9	55	500.26688776223716	NaN	0	500.2669982910156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HTNLVLATM_	REV__ENST00000607516.1_1_3:112051993-112054738:+|nuORF	35.61828744233558	0.29773779453147337	4				NaN	NaN	0	NaN	9611	3544	13150
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13171	34.219	NaN	25366	30	0	2013.4	0.214	+			39650	STIEYVIQR	9	77	554.8039300577473	1107.5933071822944	2	554.803955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STIEYVIQR_	ENSG00000101310|ENST00000650089|SEC23B	190.51785368661015	0.00024017880420896124	4				NaN	NaN	0	NaN	9622	3547	13170
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13172	34.222	NaN	18820	30	0	2239.9	0.106			+	9377	EKDQKEKLK	9	72	573.330482156956	1144.646411380712	2	573.330322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EKDQKEKLK_	REV__ENSG00000148513|ENST00000361713|ANKRD30A;REV__ENSG00000180777|ENST00000690538|ANKRD30B;REV__nc|ENSG00000180777|Q9BXX2|ANKRD30B	115.49404669440601	0.023927554121326553	4				NaN	NaN	0	NaN	9623	3547	13170
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13173	34.224	NaN	12397	30	0	3483.4	0.106			+	37841	SNKEEELQR	9	66	566.7829817394609	1131.5514105457216	2	566.7832641601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SNKEEELQR_	REV__ENSG00000133026|ENST00000360416|MYH10;REV__ENST00000488329.1_1_17:8396030-8397167:-|nuORF;REV__nc|ENSG00000133026|P35580-2|MYH10;REV__nc|ENSG00000133026|P35580-3|MYH10;REV__nc|ENSG00000133026|P35580-5|MYH10;REV__nc|ENSG00000133026|P35580|MYH10	66.96192283764107	0.15557981141143568	4				NaN	NaN	0	NaN	9624	3547	13170
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13174	34.226	NaN	4807.1	30	0	976.97	0.106			+	20928	KKAFKVTE	8	71	475.78718255703575	949.5598121808715	2	475.787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KKAFKVTE_	REV__tr|U7SUS5|U7SUS5_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00987PE=4SV=1	47.91560031466742	0.6071945918984287	4				NaN	NaN	0	NaN	9625	3547	13170
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13175	34.228	NaN	3097.5	30	0	508.9	0.106			+	14414	GTAPLVILSH	10	65	336.534223652868	NaN	0	336.5343322753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTAPLVILSH_	REV__ENST00000444374.1_1_9:92316696-92316852:+|nuORF	20.94693142431847	0.4201028297492154	4				NaN	NaN	0	NaN	9626	3547	13170
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13176	34.23	NaN	2506.5	30	0	324.57	0.106			+	26722	LVLCTFAPQ	9	63	496.26934917985886	990.5241454265177	2	496.26898193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LVLCTFAPQ_	REV__F2RL3|p.A249V|1|0.56|ENSG00000127533|chr19:16890209-16890209|C/T|missense_variant	44.116797842482775	0.37197099687881774	4				NaN	NaN	0	NaN	9627	3547	13170
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13177	34.231	NaN	3082.5	30	0	261.4	0.035	+			20364	KESLKELSL	9	71	523.808943983682	1045.6033350341638	2	524.310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KESLKELSL_	ENSG00000023191|ENST00000354420|RNH1;ENST00000525522.5_1_11:494693-499199:-|nuORF;ENST00000525701.5_1_11:494693-500690:-|nuORF	42.86426827375447	0.38666266728046506	4				NaN	NaN	0	NaN	9628	3547	13170
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13195	34.268	NaN	73490	30	0	10851	0.214				-1	 	0	100	517.8344937815748	1033.6544346299495	2	517.8341674804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9643	3550	13194
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13196	34.271	NaN	14278	30	0	951.28	0.106	+			13864	GQWKKGFVL	9	83	531.8086398537046	1061.602726774209	2	531.8089599609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GQWKKGFVL_	ENSG00000142864|ENST00000361219|SERBP1;ENST00000484880.1_1_1:67885652-67890638:-|nuORF;nc|ENSG00000142864|Q8NC51-2|SERBP1;nc|ENSG00000142864|Q8NC51-4|SERBP1;nc|ENSG00000142864|Q8NC51|SERBP1	102.7733458925114	0.03637199559902695	4				NaN	NaN	0	NaN	9644	3550	13194
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13197	34.273	NaN	4665.9	30	0	511.07	0.106	+			49691	VYKLCTQTI	9	66	563.3025049231313	1124.5904569130626	2	563.3026123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_VYKLC(Carbamidomethyl (C))TQTI_	ENST00000570041.1_2_16:53532500-53534232:-|nuORF	134.7655990226056	0.012935733000282069	4				NaN	NaN	0	NaN	9645	3550	13194
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13198	34.275	NaN	2193.2	30	0	261.35	0.106			+	26590	LTVKEESL	8	54	459.7608155842749	917.5070782353498	2	459.76043701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LTVKEESL_	REV__CCDC40|p.A894V|1|0.24|ENSG00000141519|chr17:80088072-80088072|C/T|missense_variant	30.503639358989545	0.7238069182250283	4				NaN	NaN	0	NaN	9646	3550	13194
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13199	34.277	NaN	2628.7	30	0	486.18	0.106	+			3300	ASLSLTLQK	9	59	480.7900532314679	959.5655535297358	2	480.7896423339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASLSLTLQK_	ENSG00000100242|ENST00000689035|SUN2;nc|ENSG00000100242|Q9UH99-2|SUN2;nc|ENSG00000100242|Q9UH99-3|SUN2	65.46538089061403	0.16805504838372562	4				NaN	NaN	0	NaN	9647	3550	13194
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13200	34.279	NaN	1789.9	30	0	241.51	0.106				-1	SHCVCVAGGQR	11	51	587.264892578125	NaN	0	587.264892578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_SHCVC(Carbamidomethyl (C))VAGGQR_	ENST00000397637.5_1_21:48055700-48056138:+|nuORF	22.579656572578934	0.456735970842152	4				NaN	NaN	0	NaN	9648	3550	13194
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13201	34.28	NaN	2921.9	30	0	211.09	0.038	+			43261	TEYVNRQFM	9	66	594.2797376831953	1186.5449224331905	2	594.280029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TEYVNRQFM_	ENSG00000135387|ENST00000341394|CAPRIN1;nc|ENSG00000135387|Q14444-2|CAPRIN1	64.20726635412375	0.17854274437659667	4				NaN	NaN	0	NaN	9649	3550	13194
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13215	34.309	NaN	3851.3	30	0	549.19	0.214	+			6584	AYLHTTTTF	9	75	527.7638086779873	1053.5130644227745	2	528.2655029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AYLHTTTTF_	ABCC3|p.L968Afs*31|1|0.33|ENSG00000108846|chr17:50675920-50675921|-/G|frameshift_variant;ENSG00000108846|ENST00000285238|ABCC3;ENST00000502426.5_1_17:48736553-48755440:+|nuORF;nc|ENSG00000108846|O15438-2|ABCC3;nc|ENSG00000108846|O15438-4|ABCC3;nc|ENSG00000108846|O15438-5|ABCC3	76.7741389293348	0.11149722112137898	4				NaN	NaN	0	NaN	9660	3553	13214
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13216	34.313	NaN	2670	30	0	168.58	0.038				-1	SCSRNTQTQR	10	62	619.288669812916	1236.562786692632	2	619.7900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SC(Carbamidomethyl (C))SRNTQTQR_	ENST00000322475.12_2_13:51855388-51855466:+|nuORF	31.529811441608018	0.6223461015008678	4				NaN	NaN	0	NaN	9661	3553	13214
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13230	34.342	NaN	1905.8	30	0	138.83	0.214	+			9982	ERITDVEYL	9	59	569.2928472777853	NaN	0	569.2937622070312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ERITDVEYL_	ENST00000343986.8_1_20:60963522-60963555:+|nuORF	40.77816245573522	0.2702456086868081	4				NaN	NaN	0	NaN	9672	3556	13229
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13231	34.346	NaN	2101.8	30	0	226.86	0.106	+			6978	CPVCLQKRVEE	11	62	652.3263549804688	NaN	0	652.3263549804688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_CPVCLQKRVEE_	PXDN|p.A1475V|1|0.14|ENSG00000130508|chr2:1634220-1634220|G/A|missense_variant	32.81241826257853	0.4191849651971536	4				NaN	NaN	0	NaN	9673	3556	13229
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13232	34.348	NaN	2103.4	30	0	257.94	0.037			+	22569	KTSPHVSSLQS	11	56	585.8116379904733	NaN	0	585.8121337890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KTSPHVSSLQS_	REV__ENSG00000150347|ENST00000279873|ARID5B;REV__nc|ENSG00000150347|Q14865-2|ARID5B	36.31764250033197	0.4035636655321173	4				NaN	NaN	0	NaN	9674	3556	13229
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13248	34.381	NaN	3433.2	30	0	170.11	0.214			+	28591	NKKVTALIV	9	72	493.3240766708449	984.6336004084898	2	493.3242492675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NKKVTALIV_	REV__ENST00000511516.5_1_5:39003663-39003717:-|nuORF	58.78195531508484	0.22376836668196862	4				NaN	NaN	0	NaN	9687	3559	13247
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13249	34.385	NaN	3003.2	30	0	247.48	0.106	+			51304	YSDDTLKQL	9	71	541.7710942633056	1081.527635593411	2	541.7716674804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YSDDTLKQL_	ENSG00000132199|ENST00000647584|ENOSF1;ENST00000578651.5_1_18:683014-712587:-|nuORF;ENST00000585004.5_1_18:688572-706535:-|nuORF;nc|ENSG00000132199|Q7L5Y1-2|ENOSF1;nc|ENSG00000132199|Q7L5Y1-4|ENOSF1;nc|ENSG00000132199|Q7L5Y1-5|ENOSF1;nc|ENSG00000132199|Q7L5Y1-6|ENOSF1	63.53385203322761	0.18415635464017938	4				NaN	NaN	0	NaN	9688	3559	13247
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13250	34.387	NaN	2498	30	0	215.32	0.106				-1	KMKLHMRMVK	10	70	675.3666591128864	1348.7187652925727	2	675.3656616210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	3 Oxidation (M)	_KM(Oxidation (M))KLHM(Oxidation (M))RM(Oxidation (M))VK_	NCAM2|p.N309Mfs*62|1|0.3|ENSG00000154654|chr21:21338412-21338412|A/-|frameshift_variant	35.61828744233558	0.588957954432594	4				NaN	NaN	0	NaN	9689	3559	13247
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13251	34.388	NaN	3332.4	30	0	286.07	0.036			+	7801	DPHVRTSFQ	9	71	543.7692645039527	1085.5239760747054	2	543.769287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DPHVRTSFQ_	REV__ENSG00000188818|ENST00000283441|ZDHHC11	32.81241826257853	0.4965981579233955	4				NaN	NaN	0	NaN	9690	3559	13247
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13265	34.418	NaN	7854.2	30	0	2489.2	0.213				-1	CSMVVLLTLVS	11	75	619.329646487973	1236.644740042746	2	619.3294677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_C(Carbamidomethyl (C))SM(Oxidation (M))VVLLTLVS_	ENST00000518857.5_1_8:104081005-104081197:+|nuORF	37.81151784470057	0.5878881669006212	4				NaN	NaN	0	NaN	9701	3562	13264
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13266	34.422	NaN	4174.2	30	0	1106.3	0.106			+	36147	SEKTILIR	8	51	480.2977484250989	958.5809439169979	2	480.2975769042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEKTILIR_	REV__ENSG00000011454|ENST00000373647|RABGAP1;REV__nc|ENSG00000188394|Q9Y3P9-2|RABGAP1	76.7741389293348	0.3504530765139327	4				NaN	NaN	0	NaN	9702	3562	13264
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13267	34.424	NaN	3996.3	30	0	458.72	0.106	+			41057	SVIGLQMGTNK	11	71	574.3110515825483	1146.6075502318965	2	574.3106689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVIGLQMGTNK_	ENSG00000117519|ENST00000370206|CNN3;nc|ENSG00000117519|Q15417-2|CNN3;nc|ENSG00000117519|Q15417-3|CNN3	99.73179938255973	0.06124157796180628	4				NaN	NaN	0	NaN	9703	3562	13264
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13268	34.426	NaN	3961.1	30	0	543.4	0.106	+			19092	IYIKQIKTF	9	58	577.353379851293	1152.6922067693858	2	577.352783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IYIKQIKTF_	ENSG00000103479|ENST00000262133|RBL2	56.632244143249146	0.24168844994051353	4				NaN	NaN	0	NaN	9704	3562	13264
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13269	34.427	NaN	1963.7	30	0	180.51	0.106				-1	IVYCGQVFEK	10	57	621.812972887135	1241.6113928410698	2	622.3147583007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_IVYC(Carbamidomethyl (C))GQVFEK_	ENSG00000105640|ENST00000222247|RPL18A;ENST00000600238.1_1_19:17972170-17973061:+|nuORF	38.753607047826485	0.5606299674732264	4				NaN	NaN	0	NaN	9705	3562	13264
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13270	34.429	NaN	1580.2	30	0	127.01	0.038			+	48794	VTYWMTSPVL	10	59	598.8055419921875	NaN	0	598.8055419921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTYWMTSPVL_	REV__ENST00000334121.10_1_5:65475561-65475615:+|nuORF	36.446750945000026	0.3805027428805705	4				NaN	NaN	0	NaN	9706	3562	13264
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13286	34.462	NaN	24367	30	0	10755	0.214	+			6690	AYVHMVTHF	9	99	368.84786278939896	1103.5217589683969	3	368.8480224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AYVHMVTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	50.0245360154114	0.3026755932229825	4				NaN	NaN	0	NaN	9719	3565	13285
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13287	34.466	NaN	3286.6	30	0	415.94	0.106	+			6695	AYVHMVTHF	9	69	552.7685509160293	1103.5225488988585	2	552.7691650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AYVHMVTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	76.84663266511073	0.11118375776443899	4				NaN	NaN	0	NaN	9720	3565	13285
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13288	34.468	NaN	2147.7	30	0	269.27	0.106			+	49575	VYEKDVKL	8	51	497.28487815152084	992.5552033698417	2	497.2841491699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYEKDVKL_	REV__ENSG00000166224|ENST00000373202|SGPL1	27.882242232435846	0.7440473649773525	4				NaN	NaN	0	NaN	9721	3565	13285
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13289	34.47	NaN	4639	30	0	550.37	0.039	+			14911	GTLTQNEMIFK	11	73	649.3269870385122	1296.6394211438244	2	649.8276977539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_GTLTQNEM(Oxidation (M))IFK_	ENSG00000054793|ENST00000338821|ATP9A;ENSG00000166377|ENST00000426216|ATP9B;nc|ENSG00000054793|O75110-2|ATP9A;nc|ENSG00000166377|O43861-2|ATP9B	61.76455937419982	0.30770400073182314	4				NaN	NaN	0	NaN	9722	3565	13285
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13305	34.503	NaN	8731.2	30	0	882.89	0.143	+			4454	ATIMGVRFK	9	84	511.7947395278309	1021.5749261224619	2	511.7947082519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATIMGVRFK_	ENSG00000096092|ENST00000211314|TMEM14A	106.68306549817024	0.032382560583716295	4				NaN	NaN	0	NaN	9735	3568	13304
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13321	34.538	NaN	2286.3	30	0	185.86	0.214	+			1267	AESEKWQQAL	10	62	595.2960308860853	1188.5775088389705	2	595.29638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AESEKWQQAL_	ENSG00000197170|ENST00000356126|PSMD12;ENST00000584289.5_1_17:65341859-65362635:-|nuORF;nc|ENSG00000197170|O00232-2|PSMD12	47.95952297671804	0.47580206326914537	4				NaN	NaN	0	NaN	9748	3571	13320
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13322	34.541	NaN	3134.6	30	0	371.87	0.037	+			23504	LAGPARDAVEE	11	67	564.2901611328125	NaN	0	564.2901611328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LAGPARDAVEE_	ENST00000345617.7_1_2:239974412-239974691:-|nuORF	35.15202426646627	0.40875833226131825	4				NaN	NaN	0	NaN	9749	3571	13320
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13340	34.579	NaN	4280	30	0	486.5	0.214			+	42301	TAFAIANGLL	10	77	495.7846592959444	989.5547656586888	2	495.78466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAFAIANGLL_	REV__ENSG00000160325|ENST00000316948|CACFD1;REV__nc|ENSG00000160325|Q9UGQ2-2|CACFD1;REV__nc|ENSG00000160325|Q9UGQ2-3|CACFD1;REV__nc|ENSG00000160325|Q9UGQ2-4|CACFD1	54.722347961057174	0.4138398245444204	4				NaN	NaN	0	NaN	9764	3574	13339
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13341	34.582	NaN	2193.9	30	0	236.19	0.106				-1	EMMLLGRKK	9	73	561.311932308601	NaN	0	561.3115234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_EM(Oxidation (M))MLLGRKK_	ENST00000426595.1_1_7:55979357-55979459:+|nuORF	26.69291269510374	0.34280015626154364	4				NaN	NaN	0	NaN	9765	3574	13339
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13342	34.584	NaN	3140.4	30	0	385.01	0.106	+			33149	RESQDTSFTTL	11	63	642.8070837052961	1283.5996144773922	2	642.80712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RESQDTSFTTL_	ENSG00000198380|ENST00000357308|GFPT1;nc|ENSG00000198380|Q06210-2|GFPT1	50.033510581677724	0.4206539900604183	4				NaN	NaN	0	NaN	9766	3574	13339
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13343	34.586	NaN	2432.5	30	0	385.9	0.106				-1	 	0	71	336.53410826205584	1006.5804953863676	3	336.5342102050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9767	3574	13339
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13344	34.588	NaN	2499.8	30	0	267.12	0.106	+			876	AEHFLEQQM	9	60	566.7584451746561	1131.5023374161121	2	566.7583618164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEHFLEQQM_	CCT3|p.A379Lfs*9|1|0.21|ENSG00000163468|chr1:156312061-156312061|C/-|frameshift_variant;CCT3|p.K197Nfs*23|1|0.17|ENSG00000163468|chr1:156320857-156320857|T/-|frameshift_variant;CCT3|p.L350Ffs*9|1|0.49|ENSG00000163468|chr1:156312146-156312147|-/A|frameshift_variant;ENSG00000163468|ENST00000295688|CCT3;nc|ENSG00000163468|P49368-2|CCT3	30.568863376406313	0.5175653706841606	4				NaN	NaN	0	NaN	9768	3574	13339
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13345	34.59	NaN	2661.6	30	0	347.26	0.039				-1	QLDCARFAKAI	11	66	646.8404322570715	1291.6663115809429	2	646.8399658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_QLDC(Carbamidomethyl (C))ARFAKAI_	ENSG00000130939|ENST00000343090|UBE4B;nc|ENSG00000130939|O95155-2|UBE4B;nc|ENSG00000130939|O95155-3|UBE4B;nc|ENSG00000130939|O95155-4|UBE4B	24.519189625965996	0.7326048944360514	4				NaN	NaN	0	NaN	9769	3574	13339
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13346	34.59	NaN	2373.5	30	0	231.38	0.143			+	6982	CPVSARRGCEQ	11	58	631.7894747703677	1261.5643966075354	2	632.2898559570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_CPVSARRGC(Carbamidomethyl (C))EQ_	REV__PLEKHA6|p.V328Yfs*172|15|0.36|ENSG00000143850|chr1:204259283-204259283|C/-|frameshift_variant	40.05817265558897	0.5571470695993369	4				NaN	NaN	0	NaN	9770	3574	13339
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13360	34.622	NaN	3885.4	30	0	557.38	0.215			+	17275	IAALLCTYG	9	65	491.2563873223968	980.4982217115936	2	491.2607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_IAALLC(Carbamidomethyl (C))TYG_	REV__CASR|p.S911Pfs*28|2|0.2|ENSG00000036828|chr3:122284680-122284680|C/-|frameshift_variant;REV__ENSG00000036828|ENST00000639785|CASR;REV__nc|ENSG00000036828|P41180-2|CASR	52.29916861842294	0.2778091507991977	4				NaN	NaN	0	NaN	9781	3577	13359
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13361	34.625	NaN	2397.4	30	0	263.48	0.039			+	46862	VIKQNNSNYIE	11	61	661.3418550002042	1320.6691570672083	2	661.3408813476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VIKQNNSNYIE_	REV__ENSG00000171557|ENST00000336098|FGG;REV__nc|ENSG00000171557|P02679-2|FGG	29.170058357718403	0.683821074385409	4				NaN	NaN	0	NaN	9782	3577	13359
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13375	34.655	NaN	6925.3	30	0	1080.2	0.215			+	7749	DNFNFIVI	8	70	491.2563873223968	980.4982217115936	2	491.2543029785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DNFNFIVI_	REV__tr|U7T614|U7T614_FUSNU7,8-dihydro-8-oxoguaninetriphosphataseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00337PE=4SV=1	53.351449002276354	0.5676011784961348	4				NaN	NaN	0	NaN	9793	3580	13374
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13376	34.658	NaN	2580.2	30	0	708.55	0.106				-1	ICHGLATL	8	55	442.73606795133395	883.4575829694679	2	442.7364807128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_IC(Carbamidomethyl (C))HGLATL_	ENSG00000145495|ENST00000274140|MARCHF6;nc|ENSG00000145495|O60337-5|MARCHF6;nc|ENSG00000145495|O60337-6|MARCHF6	37.028477286268924	0.6747514403204248	4				NaN	NaN	0	NaN	9794	3580	13374
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13377	34.66	NaN	1805.2	30	0	194.01	0.037				-1	HHARAWAAPM	10	47	582.2777891439976	NaN	0	582.2779541015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_HHARAWAAPM(Oxidation (M))_	BCOR|p.N529Tfs*60|1|0.51|ENSG00000183337|chrX:40073760-40073760|T/-|frameshift_variant	44.116797842482775	0.3427969396372342	4				NaN	NaN	0	NaN	9795	3580	13374
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13394	34.695	NaN	2352.2	30	0	509.5	0.214				-1	 	0	56	334.2118184358942	666.4090839385884	2	334.21173095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9809	3583	13393
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13395	34.699	NaN	2158.5	30	0	197.89	0.106	+			43066	TELLIRKL	8	69	493.3236479656643	NaN	0	493.32366943359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TELLIRKL_	ENSG00000132475|ENST00000254810|H3-3B;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000168148|ENST00000366696|H3-4;ENSG00000183598|ENST00000331491|H3C13;ENSG00000188375|ENST00000340398|H3-5;ENSG00000197153|ENST00000359303|H3C12;ENSG00000197409|ENST00000356476|H3C4;ENSG00000203811|ENST00000369158|H3C14;ENSG00000203852|ENST00000403683|H3C15;ENSG00000273983|ENST00000614378|H3C8;ENSG00000274750|ENST00000614911|H3C6;ENSG00000275379|ENST00000616365|H3C11;ENSG00000275714|ENST00000613854|H3C1;ENSG00000277775|ENST00000618052|H3C7;ENSG00000278828|ENST00000685041|H3C10;ENST00000401004.2_1:120904811-120905087:+|nuORF;ENST00000497682.1_1_3:109128527-109128830:-|nuORF;ENST00000586518.1_1_17:73774674-73775034:-|nuORF;nc|ENSG00000273213|Q5TEC6|H3-7	63.30626980617807	1.7418937515398478	4				NaN	NaN	0	NaN	9810	3583	13393
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13396	34.701	NaN	3246.7	30	0	369.63	0.106	+			6585	AYLHTTTTF	9	67	527.7638086779873	1053.5130644227745	2	527.7640380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AYLHTTTTF_	ABCC3|p.L968Afs*31|1|0.33|ENSG00000108846|chr17:50675920-50675921|-/G|frameshift_variant;ENSG00000108846|ENST00000285238|ABCC3;ENST00000502426.5_1_17:48736553-48755440:+|nuORF;nc|ENSG00000108846|O15438-2|ABCC3;nc|ENSG00000108846|O15438-4|ABCC3;nc|ENSG00000108846|O15438-5|ABCC3	50.0245360154114	0.3026755932229825	4				NaN	NaN	0	NaN	9811	3583	13393
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13397	34.703	NaN	4857.9	30	0	312.14	0.044			+	-1	YLFNTFWYMRY	11	87	810.3689575195312	NaN	0	810.3689575195312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_YLFNTFWYM(Oxidation (M))RY_	REV__ENSG00000179869|ENST00000435803|ABCA13;REV__nc|ENSG00000179869|Q86UQ4-3|ABCA13;REV__nc|ENSG00000179869|Q86UQ4-4|ABCA13;REV__nc|ENSG00000179869|Q86UQ4-5|ABCA13;REV__nc|ENSG00000179869|Q86UQ4-6|ABCA13;REV__nc|ENSG00000179869|Q86UQ4|ABCA13	12.206681093483082	0.456735970842152	4				NaN	NaN	0	NaN	9812	3583	13393
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13412	34.734	NaN	12406	30	0	2223.6	0.142	+			15750	GVSLMTVPK	9	60	466.26789810178167	930.5212432703634	2	466.26739501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVSLMTVPK_	ENST00000284202.8_1_18:22006682-22007982:+|nuORF	136.26810882979174	0.012230845423532208	4				NaN	NaN	0	NaN	9824	3586	13411
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13428	34.769	NaN	3238.8	30	0	228.97	0.214	+			42948	TEISSAEKVAL	11	73	574.3141657542828	1146.6137785753656	2	574.3141479492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEISSAEKVAL_	ENSG00000047849|ENST00000683076|MAP4;MAP4|p.R919Gfs*14|1|0.44|ENSG00000047849|chr3:47870917-47870917|G/-|frameshift_variant;MAP4|p.T960Qfs*35|1|0.3|ENSG00000047849|chr3:47869309-47869309|T/-|frameshift_variant;MAP4|p.V999*|1|0.25|ENSG00000047849|chr3:47867318-47867318|T/-|frameshift_variant;nc|ENSG00000047849|P27816-2|MAP4;nc|ENSG00000047849|P27816-6|MAP4;nc|ENSG00000047849|P27816|MAP4	55.08391021199286	0.3673379875553588	4				NaN	NaN	0	NaN	9837	3589	13427
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13429	34.772	NaN	2233	30	0	299.38	0.038				-1	NVVLMSEEEY	10	66	614.7749098696064	1227.5352668060127	2	614.7759399414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_NVVLM(Oxidation (M))SEEEY_	tr|U7T3D6|U7T3D6_FUSNUAntitoxinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00231PE=3SV=1	39.252832667884924	0.5560298534376815	4				NaN	NaN	0	NaN	9838	3589	13427
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13442	34.8	NaN	12894	30	0	4669.4	0.214	+			6691	AYVHMVTHF	9	88	368.84786278939896	1103.5217589683969	3	368.8479309082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AYVHMVTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	52.29916861842294	0.2778091507991977	4				NaN	NaN	0	NaN	9848	3592	13441
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13443	34.804	NaN	7008	30	0	728.96	0.106	+			6397	AVVGAVVFQK	10	69	509.3083943555427	1016.6022357778854	2	509.3080749511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVVGAVVFQK_	ENSG00000169223|ENST00000303127|LMAN2;ENST00000504071.1_1_5:176759089-176761465:-|nuORF;ENST00000515209.5_1_5:176759089-176761331:-|nuORF	99.37495909608758	0.07955302164878343	4				NaN	NaN	0	NaN	9849	3592	13441
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13444	34.806	NaN	3498.1	30	0	428.44	0.106			+	29574	PFHAGAGDLSF	11	63	559.7671685611846	NaN	0	559.767578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PFHAGAGDLSF_	REV__ENSG00000113621|ENST00000358387|TXNDC15;REV__nc|ENSG00000113621|Q96J42-2|TXNDC15	58.78195531508484	0.2445488647199508	4				NaN	NaN	0	NaN	9850	3592	13441
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13445	34.807	NaN	3830.7	30	0	933.94	0.106			+	29486	PCSHLLKS	8	58	442.73606795133395	883.4575829694679	2	442.73638916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PCSHLLKS_	REV__ENSG00000249961|ENST00000433154|TERB1	35.200714571348534	0.6875396545722289	4				NaN	NaN	0	NaN	9851	3592	13441
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13446	34.809	NaN	2327.4	30	0	438.2	0.038	+			26223	LSSLDTAHCRD	11	63	609.2828979492188	NaN	0	609.2828979492188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSSLDTAHCRD_	ENST00000326080.9_2_5:154217706-154230085:-|nuORF	35.15202426646627	0.40875833226131825	4				NaN	NaN	0	NaN	9852	3592	13441
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13459	34.837	NaN	4298	30	0	649.12	0.214			+	45386	TVTKVLKPI	9	69	333.55835488671863	NaN	0	333.558349609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVTKVLKPI_	REV__ENST00000597384.1_1_19:7571970-7578873:+|nuORF	19.359975847455235	0.3714571876404798	4				NaN	NaN	0	NaN	9862	3595	13458
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13460	34.84	NaN	3152.5	30	0	289.11	0.106			+	25196	LMHRGTAICY	10	68	611.2964367290351	1220.5783205248702	2	611.296142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LMHRGTAIC(Carbamidomethyl (C))Y_	REV__ENSG00000157796|ENST00000399820|WDR19;REV__ENST00000512588.5_1_4:39278595-39280267:+|nuORF	49.44154591367651	0.46214596422418036	4				NaN	NaN	0	NaN	9863	3595	13458
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13461	34.842	NaN	2015.9	30	0	130.62	0.035	+			25775	LSALKQLLL	9	50	499.8341988952433	NaN	0	499.8343811035156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSALKQLLL_	ENSG00000095564|ENST00000265990|BTAF1;nc|ENSG00000095564|O14981-2|BTAF1	56.72105179125745	0.16330365735109603	4				NaN	NaN	0	NaN	9864	3595	13458
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13472	34.867	NaN	2226.6	30	0	204.18	0.214	+			6696	AYVHMVTHF	9	63	552.7685509160293	1103.5225488988585	2	552.7686767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AYVHMVTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	25.450171626174864	0.5654022654467333	4				NaN	NaN	0	NaN	9872	3598	13471
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13473	34.871	NaN	2129.2	30	0	250.55	0.037				-1	VYTCLRIPR	9	55	589.3311767578125	NaN	0	589.3311767578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_VYTC(Carbamidomethyl (C))LRIPR_	ENSG00000169762|ENST00000405303|TAPT1;nc|ENSG00000169762|Q6NXT6-2|TAPT1;TAPT1|p.K545Nfs*10|1|0.09|ENSG00000169762|chr4:16163377-16163377|T/-|frameshift_variant	35.61828744233558	0.29773779453147337	4				NaN	NaN	0	NaN	9873	3598	13471
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13485	34.896	NaN	2287.3	30	0	308.62	0.214			+	25999	LSKLLLVVN	9	57	333.55835488671863	NaN	0	333.55816650390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSKLLLVVN_	REV__DHX16|p.I1033*|5|0.32|ENSG00000204560|chr6:30653271-30653271|T/-|frameshift_variant;REV__DHX16|p.R868Lfs*15|1|0.04|ENSG00000204560|chr6:30655493-30655493|C/-|frameshift_variant;REV__ENSG00000140829|ENST00000268482|DHX38;REV__ENSG00000204560|ENST00000376442|DHX16;REV__nc|ENSG00000140829|Q92620-2|DHX38	21.9598887501803	0.3626577482100488	4				NaN	NaN	0	NaN	9882	3601	13484
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13486	34.9	NaN	1883.6	30	0	214	0.106			+	29726	PHMMKLSL	8	60	478.7559375914343	955.4973222496686	2	478.75604248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PHMMKLSL_	REV__ZCCHC9|p.N51Mfs*18|1|0.22|ENSG00000131732|chr5:81304905-81304905|A/-|frameshift_variant	55.50420428727701	0.5462892107279674	4				NaN	NaN	0	NaN	9883	3601	13484
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13487	34.902	NaN	1813.2	30	0	193.13	0.037				-1	IYKSIMEQF	9	53	587.7944311344655	NaN	0	587.79443359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_IYKSIM(Oxidation (M))EQF_	ENSG00000128298|ENST00000381669|BAIAP2L2;nc|ENSG00000128298|Q6UXY1-2|BAIAP2L2	61.76455937419982	0.141793055474112	4				NaN	NaN	0	NaN	9884	3601	13484
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13500	34.929	NaN	9307.6	30	0	880.18	0.214	+			12832	GENKMGQLGL	10	77	523.7686385753958	1045.5227242175915	2	523.7688598632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GENKMGQLGL_	ENSG00000179051|ENST00000375436|RCC2;ENST00000405832.2_1_6:56297536-56297638:-|nuORF;ENST00000526625.2_1_11:62139723-62139795:+|nuORF;RCC2|p.A423Qfs*56|1|0.13|ENSG00000179051|chr1:17413120-17413120|T/-|frameshift_variant	150.36159442982594	0.008431331982545942	4				NaN	NaN	0	NaN	9894	3604	13499
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13501	34.933	NaN	2280.8	30	0	274.75	0.106				-1	LRMTFTCFM	9	46	640.7779748952564	NaN	0	640.7783813476562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term),Carbamidomethyl (C),2 Oxidation (M)	_(Acetyl (Protein N-term))LRM(Oxidation (M))TFTC(Carbamidomethyl (C))FM(Oxidation (M))_	ENST00000399300.6_1_8:94747302-94747362:-|nuORF	18.324413293986947	0.3749620627292244	4				NaN	NaN	0	NaN	9895	3604	13499
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13502	34.935	NaN	1487.2	30	0	152.55	0.106			+	-1	PNKEMVAL	8	44	459.2429734400049	NaN	0	458.7710876464844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_PNKEM(Oxidation (M))VAL_	REV__ENSG00000102053|ENST00000338957|ZC3H12B;REV__nc|ENSG00000102053|Q5HYM0-2|ZC3H12B	21.70233525837049	1.7418937515398478	4				NaN	NaN	0	NaN	9896	3604	13499
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13503	34.937	NaN	3546.8	30	0	312.52	0.04			+	-1	KQIAMKPNKYC	11	61	690.8583984375	NaN	0	690.8583984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_KQIAMKPNKYC(Carbamidomethyl (C))_	REV__ENSG00000121446|ENST00000294854|RGSL1;REV__nc|ENSG00000121446|A5PLK6-2|RGSL1;REV__nc|ENSG00000121446|A5PLK6-3|RGSL1;REV__nc|ENSG00000121446|A5PLK6-4|RGSL1;REV__nc|ENSG00000121446|A5PLK6-5|RGSL1	23.52269567125451	0.456735970842152	4				NaN	NaN	0	NaN	9897	3604	13499
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13516	34.965	NaN	6362.7	30	0	1822.7	0.214			+	9608	ELLTLQRAI	9	77	528.8242754681195	1055.6339980030389	2	528.8243408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ELLTLQRAI_	REV__ENSG00000100485|ENST00000216373|SOS2;REV__ENSG00000115904|ENST00000402219|SOS1;REV__nc|ENSG00000100485|Q07890-2|SOS2;REV__SOS1|p.K1030Nfs*6|1|0.34|ENSG00000115904|chr2:38995379-38995379|T/-|frameshift_variant	42.396135135203025	0.392153681582562	4				NaN	NaN	0	NaN	9907	3607	13515
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13517	34.968	NaN	3338.6	30	0	372.35	0.106				-1	 	0	77	336.53410826205584	1006.5804953863676	3	336.5343017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	9908	3607	13515
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13518	34.97	NaN	5706.9	30	0	1236.6	0.106			+	-1	AMFYDEAIYQA	11	79	669.2893415346402	1336.5641301360804	2	669.2886352539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_AM(Oxidation (M))FYDEAIYQA_	REV__ENSG00000148154|ENST00000374279|UGCG;REV__UGCG|p.L365Cfs*9|4|0.31|ENSG00000148154|chr9:111932900-111932900|T/-|frameshift_variant	25.57405402267927	0.7215402271931856	4				NaN	NaN	0	NaN	9909	3607	13515
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13519	34.972	NaN	2705.5	30	0	405.29	0.106				-1	MPKRKAKGDA	10	57	580.3150506040536	NaN	0	580.3148193359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))M(Oxidation (M))PKRKAKGDA_	ENSG00000182952|ENST00000377575|HMGN4	30.317721548370564	0.4006274431774794	4				NaN	NaN	0	NaN	9910	3607	13515
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13520	34.974	NaN	1622.2	30	0	129.14	0.106	+			49689	VYKILSTHL	9	51	537.3213654483612	1072.6281779635224	2	537.3215942382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VYKILSTHL_	CLOCK|p.N189Kfs*23|1|0.31|ENSG00000134852|chr4:55459254-55459255|-/T|frameshift_variant;ENSG00000134852|ENST00000513440|CLOCK	47.95952297671804	0.32689736945648856	4				NaN	NaN	0	NaN	9911	3607	13515
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13521	34.976	NaN	2181.5	30	0	254.64	0.039				-1	REMAPFLRCQ	10	66	633.8097227220767	1265.6048925109533	2	633.8091430664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_REM(Oxidation (M))APFLRCQ_	ENSG00000270765|ENST00000604641|GAS2L2	42.396135135203025	0.5270658956260207	4				NaN	NaN	0	NaN	9912	3607	13515
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13534	35.004	NaN	10641	30	0	1102.5	0.141	+			14700	GTIGLALAR	9	81	436.271260390017	870.527967846834	2	436.2715148925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTIGLALAR_	ENSG00000099899|ENST00000252136|TRMT2A;ENST00000487668.5_1_22:20100432-20101310:-|nuORF;ENST00000494820.5_1_22:20100432-20103278:-|nuORF;nc|ENSG00000099899|Q8IZ69-2|TRMT2A	134.81075121484326	0.012914550297035062	4				NaN	NaN	0	NaN	9922	3610	13533
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13548	35.035	NaN	14612	30	0	1937.8	0.214	+			17836	IFIKDSNSL	9	88	518.7880298270431	1035.5615067208862	2	518.78759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IFIKDSNSL_	ENSG00000099995|ENST00000215793|SF3A1;nc|ENSG00000099995|Q15459-2|SF3A1	114.8945686534367	0.024290463251177924	4				NaN	NaN	0	NaN	9933	3613	13547
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13549	35.038	NaN	12724	30	0	2084	0.106	+			5713	AVFGVIGSQK	10	74	503.29014479589716	1004.5657366585943	2	503.289794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVFGVIGSQK_	ENSG00000065183|ENST00000349139|WDR3;WDR3|p.A919Cfs*2|1|0.38|ENSG00000065183|chr1:117959363-117959364|-/T|frameshift_variant;WDR3|p.K204Sfs*12|1|0.29|ENSG00000065183|chr1:117939505-117939505|A/-|frameshift_variant;WDR3|p.T410Ifs*46|1|0.05|ENSG00000065183|chr1:117943526-117943527|-/TAAATGTT|frameshift_variant	78.26377905018397	0.20980573808910843	4				NaN	NaN	0	NaN	9934	3613	13547
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13550	35.04	NaN	1740.4	30	0	218.66	0.106	+			7909	DSDPNPLAPTF	11	61	587.274178077342	NaN	0	587.2737426757812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DSDPNPLAPTF_	ENST00000602477.1_1_1:9299915-9300071:+|nuORF	51.19269402634007	0.30675235723580535	4				NaN	NaN	0	NaN	9935	3613	13547
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13551	35.042	NaN	3005.7	30	0	628.55	0.037			+	50278	WRQGRLYY	8	58	571.2985422014166	1140.582531469633	2	571.299072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_WRQGRLYY_	REV__ENSG00000206579|ENST00000327381|XKR4	46.76643321282427	0.6143254112625767	4				NaN	NaN	0	NaN	9936	3613	13547
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13564	35.07	NaN	3968.3	30	0	1030.7	0.214			+	7629	DKILDYTV	8	61	483.7606240955819	965.5066952579638	2	483.760498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DKILDYTV_	REV__ENSG00000175567|ENST00000663595|UCP2	40.77816245573522	0.6514838689002179	4				NaN	NaN	0	NaN	9946	3616	13563
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13565	35.074	NaN	5658.2	30	0	488.11	0.106	+			1190	AENPGKYNIL	10	84	559.7962274446473	1117.5779019560946	2	559.7962646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AENPGKYNIL_	ENSG00000153187|ENST00000640218|HNRNPU;nc|ENSG00000153187|Q00839-2|HNRNPU	70.8162118820467	0.27065172005956	4				NaN	NaN	0	NaN	9947	3616	13563
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13566	35.076	NaN	3007	30	0	395.89	0.106	+			39844	STLLNPIPK	9	64	491.80024709344735	981.5859412536947	2	491.8001403808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STLLNPIPK_	ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3;SCYL3|p.N511Ifs*68|1|0.35|ENSG00000000457|chr1:169854907-169854907|T/-|frameshift_variant	77.31757898189308	0.1091473830098891	4				NaN	NaN	0	NaN	9948	3616	13563
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13567	35.077	NaN	4397.3	30	0	381.19	0.106	+			20030	KEITALAPSTM	11	68	581.3136580897193	1160.6127632462385	2	581.3140258789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEITALAPSTM_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000184009|ENST00000573283|ACTG1;ENST00000415776.1_1_Y:19868883-19869072:-|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000493945.5_1_7:5567381-5567853:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2	43.650786325866115	0.5079891456189096	4				NaN	NaN	0	NaN	9949	3616	13563
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13568	35.079	NaN	3201.8	30	0	312.72	0.038	+			4590	ATLGDLKLVEK	11	63	593.8566124466811	1185.698671960162	2	593.856689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATLGDLKLVEK_	ENSG00000129083|ENST00000439561|COPB1	44.639436926238396	0.4944613868569842	4				NaN	NaN	0	NaN	9950	3616	13563
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13582	35.109	NaN	3286.7	30	0	230.76	0.214	+			18730	ITGYIVEKK	9	66	525.8134220306357	1049.6122911280713	2	525.8135375976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ITGYIVEKK_	ENSG00000155657|ENST00000589042|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42|TTN;TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;TTN|p.I24998Nfs*2|1|0.35|ENSG00000155657|chr2:178566216-178566217|-/T|frameshift_variant;TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;TTN|p.K26626Nfs*34|1|0.34|ENSG00000155657|chr2:178561331-178561331|T/-|frameshift_variant;TTN|p.K26626Nfs*34|1|0.34|ENSG00000155657|chr2:178561331-178561331|T/-|frameshift_variant;TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant;TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant;TTN|p.V27442Cfs*4|1|0.05|ENSG00000155657|chr2:178558107-178558108|-/A|frameshift_variant;TTN|p.V27442Cfs*4|1|0.05|ENSG00000155657|chr2:178558107-178558108|-/A|frameshift_variant	32.75053402867276	0.49717649897795874	4				NaN	NaN	0	NaN	9961	3619	13581
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13583	35.112	NaN	3459.6	30	0	682.9	0.036			+	11466	FNLLAKFAL	9	66	346.2110196656515	1035.6112295971545	3	346.211181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FNLLAKFAL_	REV__ENSG00000100154|ENST00000397906|TTC28;REV__TTC28|p.A2381Lfs*5|1|0.15|ENSG00000100154|chr22:27982526-27982526|C/-|frameshift_variant;REV__TTC28|p.D729Rfs*10|1|0.19|ENSG00000100154|chr22:28107660-28107661|-/T|frameshift_variant;REV__TTC28|p.P1795Qfs*108|1|0.33|ENSG00000100154|chr22:27993379-27993379|G/-|frameshift_variant;REV__TTC28|p.V1305Wfs*29|1|0.31|ENSG00000100154|chr22:28094099-28094099|C/-|frameshift_variant	12.959181472943097	0.6112419832031292	4				NaN	NaN	0	NaN	9962	3619	13581
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13598	35.143	NaN	9227.7	30	0	3599.8	0.214	+			6692	AYVHMVTHF	9	80	368.84786278939896	1103.5217589683969	3	368.8479919433594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AYVHMVTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	40.5726180659479	0.4135428067754104	4				NaN	NaN	0	NaN	9974	3622	13597
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13599	35.147	NaN	3874.3	30	0	480.61	0.106	+			47908	VSLPKYFY	8	63	508.77689127923816	1015.5392296252763	2	508.775634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSLPKYFY_	CFAP47|p.H2345Afs*15|1|0.09|ENSG00000165164|chrX:36236809-36236810|-/A|frameshift_variant;CFAP47|p.P2326Tfs*34|1|0.26|ENSG00000165164|chrX:36236751-36236752|-/A|frameshift_variant;ENSG00000165164|ENST00000378653|CFAP47	44.53106598305862	0.628196326904373	4				NaN	NaN	0	NaN	9975	3622	13597
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13600	35.149	NaN	2171.5	30	0	274.93	0.106			+	33637	RLWRIGLVV	9	64	556.3586347914302	1110.7027166496603	2	556.3585815429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RLWRIGLVV_	REV__ENSG00000254656|ENST00000649591|RTL1;REV__RTL1|p.Q1207Rfs*77|4|0.14|ENSG00000254656|chr14:100881170-100881170|G/-|frameshift_variant	33.51558372728122	0.4900267029546261	4				NaN	NaN	0	NaN	9976	3622	13597
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13601	35.151	NaN	1658.4	30	0	128.98	0.106	+			21377	KMILSPHYL	9	53	551.3101356492539	1100.6057183653077	2	551.3114013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KMILSPHYL_	ENST00000464196.5_1_Y:22749894-22750047:+|nuORF;ENST00000465253.1_1_Y:22737757-22750047:+|nuORF	28.081489160057373	0.5408112046645406	4				NaN	NaN	0	NaN	9977	3622	13597
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13602	35.153	NaN	2285.2	30	0	277.12	0.037			+	-1	YQPTLDPMY	9	59	572.253987987133	NaN	0	572.253662109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_YQPTLDPM(Oxidation (M))Y_	REV__ENSG00000162408|ENST00000377705|NOL9;REV__ENST00000462798.1_1_1:6592521-6593409:-|nuORF;REV__NOL9|p.S460Afs*5|1|0.22|ENSG00000162408|chr1:6532620-6532620|T/-|frameshift_variant	28.2542754592877	0.3349171602345879	4				NaN	NaN	0	NaN	9978	3622	13597
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13618	35.186	NaN	5443.8	30	0	519.98	0.214	+			12759	GELGNGNIKL	10	69	507.78267801083615	1013.5508030884723	2	507.7826232910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GELGNGNIKL_	ENSG00000132646|ENST00000379143|PCNA	112.41091882917199	0.040839805697094264	4				NaN	NaN	0	NaN	9991	3625	13617
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13619	35.19	NaN	2817	30	0	381.05	0.106	+			24320	LFHPSNVEM	9	62	537.2577385123611	1072.5009240915222	2	537.2569580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LFHPSNVEM_	ENSG00000151694|ENST00000310823|ADAM17	45.97224482568171	0.3502073465782774	4				NaN	NaN	0	NaN	9992	3625	13617
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13620	35.192	NaN	3071.9	30	0	267.6	0.037	+			40525	STYYGSFVTR	10	58	590.7856752197761	1179.556797506352	2	590.78515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STYYGSFVTR_	EIF3H|p.S183Pfs*5|1|0.05|ENSG00000147677|chr8:116657225-116657225|A/-|frameshift_variant;ENSG00000147677|ENST00000521861|EIF3H;ENST00000517974.1_1_8:117671049-117768052:-|nuORF;ENST00000518034.5_1_8:117671049-117768048:-|nuORF	48.601550744091256	0.46988609897316763	4				NaN	NaN	0	NaN	9993	3625	13617
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13633	35.219	NaN	12945	30	0	2021.3	0.214			+	23726	LAVHLPDAK	9	79	482.28487304903643	962.5551931648729	2	482.28460693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LAVHLPDAK_	REV__ENSG00000147799|ENST00000377307|ARHGAP39;REV__ENST00000528810.1_1_8:145769259-145771014:-|nuORF;REV__nc|ENSG00000147799|Q9C0H5|ARHGAP39	79.45101966838831	0.09992237243120712	4				NaN	NaN	0	NaN	10003	3628	13632
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13634	35.223	NaN	6199.9	30	0	683.43	0.106	+			36961	SILTTHTTL	9	73	493.77980756840276	985.5450622036055	2	493.7796630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SILTTHTTL_	ENSG00000075886|ENST00000321253|TUBA3D;ENSG00000123416|ENST00000336023|TUBA1B;ENSG00000127824|ENST00000248437|TUBA4A;ENSG00000152086|ENST00000312988|TUBA3E;ENSG00000167552|ENST00000301071|TUBA1A;ENSG00000167553|ENST00000301072|TUBA1C;ENSG00000183785|ENST00000330423|TUBA8;ENSG00000198033|ENST00000400113|TUBA3C;ENSG00000243910|ENST00000490341|TUBA4B;ENST00000530835.1_1_11:90015825-90016947:+|nuORF;ENST00000559655.1_1_15:35141948-35142251:-|nuORF;nc|ENSG00000127824|P68366-2|TUBA4A;nc|ENSG00000167552|Q71U36-2|TUBA1A;nc|ENSG00000183785|Q9NY65-2|TUBA8;nc|ENSG00000198033|P0DPH7-2|TUBA3C;TUBA1B|p.H197Q|1|0.17|ENSG00000123416|chr12:49128723-49128723|G/T|missense_variant;TUBA3C|p.T361Rfs*18|1|0.17|ENSG00000198033|chr13:19174136-19174136|G/-|frameshift_variant;TUBA3D|p.G366Efs*13|1|0.17|ENSG00000075886|chr2:131482588-131482588|G/-|frameshift_variant;TUBA3D|p.V328Pfs*54|1|0.45|ENSG00000075886|chr2:131480665-131480666|-/CCCAAAGA|frameshift_variant	79.71258880314673	0.09879134589249085	4				NaN	NaN	0	NaN	10004	3628	13632
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13635	35.225	NaN	8065.7	30	0	1177.4	0.106	+			15289	GTVAGAAVLLK	11	75	500.3136668770823	998.6127808209646	2	500.3133239746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTVAGAAVLLK_	ENSG00000160439|ENST00000415061|RDH13;ENST00000589305.5_1_19:55562362-55574430:-|nuORF	168.25843898104137	3.282278943643495E-05	4				NaN	NaN	0	NaN	10005	3628	13632
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13636	35.227	NaN	3487.1	30	0	403.8	0.106	+			50011	WAWLMIVVL	9	65	573.8225953330254	1145.6306377328508	2	573.8226318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_WAWLM(Oxidation (M))IVVL_	ENST00000302640.12_1_3:4558245-4669470:+|nuORF	60.403631409065575	0.21025000616765316	4				NaN	NaN	0	NaN	10006	3628	13632
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13637	35.229	NaN	5523.6	30	0	388.72	0.036	+			24109	LEKLNQQLL	9	66	549.8299911684649	1097.6454294037296	2	549.8298950195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LEKLNQQLL_	ENSG00000173230|ENST00000614479|GOLGB1;nc|ENSG00000173230|Q14789-2|GOLGB1;nc|ENSG00000173230|Q14789-3|GOLGB1;nc|ENSG00000173230|Q14789-4|GOLGB1;nc|ENSG00000173230|Q14789|GOLGB1	62.107414245175825	0.1960472003779324	4				NaN	NaN	0	NaN	10007	3628	13632
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13649	35.255	NaN	10982	30	0	1190.7	0.215	+			8485	EASKYIMQY	9	77	566.7709156906036	1131.527278448007	2	566.7711791992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EASKYIMQY_	ENSG00000176658|ENST00000318217|MYO1D	125.81401957644128	0.01768009863045738	4				NaN	NaN	0	NaN	10016	3631	13648
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13650	35.258	NaN	5450.5	30	0	557.43	0.106	+			6571	AYLEAHETF	9	73	540.7536916528243	1079.4928303724485	2	540.7542724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AYLEAHETF_	ENSG00000111581|ENST00000229179|NUP107;nc|ENSG00000111581|P57740-2|NUP107;nc|ENSG00000111581|P57740-3|NUP107	102.7733458925114	0.03637199559902695	4				NaN	NaN	0	NaN	10017	3631	13648
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13651	35.26	NaN	3874.1	30	0	769.74	0.106	+			20035	KEITQEMQTL	10	62	610.8127298498938	1219.6109067665875	2	610.8135986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEITQEMQTL_	ENSG00000104133|ENST00000261866|SPG11;nc|ENSG00000104133|Q96JI7-2|SPG11;nc|ENSG00000104133|Q96JI7-3|SPG11	55.08391021199286	0.41055145962533396	4				NaN	NaN	0	NaN	10018	3631	13648
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13652	35.262	NaN	4173.9	30	0	396.2	0.036	+			19123	IYLNGLEEGP	10	74	552.7825671924272	1103.5505814516544	2	552.7826538085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IYLNGLEEGP_	tr|U7SFP2|U7SFP2_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02367PE=4SV=1	66.42927471994793	0.3073667423445326	4				NaN	NaN	0	NaN	10019	3631	13648
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13663	35.286	NaN	2901.4	30	0	256.71	0.214			+	45848	VALGSTLLCT	10	58	489.27232893232804	976.5301049314561	2	489.2708435058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VALGSTLLCT_	REV__ENSG00000153404|ENST00000637938|PLEKHG4B;REV__PLEKHG4B|p.G410Afs*7|1|0.52|ENSG00000153404|chr5:156154-156154|G/-|frameshift_variant;REV__PLEKHG4B|p.P777Rfs*30|1|0.19|ENSG00000153404|chr5:163465-163465|C/-|frameshift_variant	26.69291269510374	0.6618461711292317	4				NaN	NaN	0	NaN	10027	3634	13662
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13664	35.29	NaN	2242.6	30	0	331.7	0.106			+	-1	THAEKLNGVM	10	56	558.2791595735705	1114.543766213941	2	558.278564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_THAEKLNGVM(Oxidation (M))_	REV__ENST00000300976.8_1_19:18782101-18782323:+|nuORF	47.95952297671804	0.47580206326914537	4				NaN	NaN	0	NaN	10028	3634	13662
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13665	35.292	NaN	2243.6	30	0	274.98	0.106	+			33999	RSHAPQPPAH	10	64	549.2845614828345	1096.554570032469	2	549.284423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RSHAPQPPAH_	nc|ENSG00000182648|Q8NI28|RNF32-DT	37.15910966729921	0.575322462179216	4				NaN	NaN	0	NaN	10029	3634	13662
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13666	35.293	NaN	1881.9	30	0	351.21	0.036				-1	 	0	52	555.2590081684358	554.2517317018358	1	555.258544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10030	3634	13662
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13682	35.327	NaN	6484	30	0	502.28	0.214	+			2933	ASCTVILKY	9	83	527.7838231106568	1053.5530932881136	2	527.7838745117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_ASC(Carbamidomethyl (C))TVILKY_	ENST00000463441.5_1_7:150020319-150023055:+|nuORF;ENST00000493307.1_1_7:150020428-150023055:+|nuORF	93.1432384553994	0.056003526918089595	4				NaN	NaN	0	NaN	10043	3637	13681
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13683	35.33	NaN	2738.6	30	0	395.22	0.035	+			9797	ENYSTNALI	9	60	512.7484705374753	NaN	0	512.7484130859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ENYSTNALI_	ENSG00000164304|ENST00000502583|CAGE1;nc|ENSG00000164304|Q8TC20-3|CAGE1;nc|ENSG00000164304|Q8TC20-4|CAGE1;nc|ENSG00000164304|Q8TC20|CAGE1	39.252832667884924	0.27938773122138094	4				NaN	NaN	0	NaN	10044	3637	13681
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13696	35.358	NaN	2968.3	30	0	202.3	0.145	+			7707	DLQCFWIIL	9	63	575.8037639658929	1149.5929749985858	2	575.8042602539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DLQCFWIIL_	ENST00000424459.7_2_5:56471341-56471416:+|nuORF	53.351449002276354	0.2690372970092375	4				NaN	NaN	0	NaN	10054	3640	13695
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13710	35.389	NaN	4131.8	30	0	569.99	0.215	+			42392	TAISVIKNL	9	63	479.8001936862976	957.5858344393952	2	479.79998779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAISVIKNL_	ENSG00000147251|ENST00000276202|DOCK11;ENST00000553480.1_1_14:45332201-45332396:-|nuORF	31.529811441608018	0.5085848003137583	4				NaN	NaN	0	NaN	10065	3643	13709
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13711	35.392	NaN	3645.1	30	0	468.5	0.106				-1	 	0	83	336.53410826205584	1006.5804953863676	3	336.53436279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10066	3643	13709
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13712	35.394	NaN	4366.9	30	0	1004	0.106				-1	 	0	69	489.27991559042925	488.27263912382926	1	489.2795104980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10067	3643	13709
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13713	35.396	NaN	4007.5	30	0	461.52	0.106	+			33100	RELIQTSAL	9	57	515.7988274722604	1029.5831020113208	2	515.7982788085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RELIQTSAL_	ENSG00000097033|ENST00000370558|SH3GLB1;nc|ENSG00000097033|Q9Y371-2|SH3GLB1;nc|ENSG00000097033|Q9Y371-3|SH3GLB1	52.936696900407355	0.27249468807391813	4				NaN	NaN	0	NaN	10068	3643	13709
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13714	35.398	NaN	4309.4	30	0	507.27	0.041				-1	ERRQLVKGRDN	11	69	706.8900756835938	NaN	0	706.8900756835938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))ERRQLVKGRDN_	ATM|p.D2721N|1|0.35|ENSG00000149311|chr11:108335854-108335854|G/A|missense_variant	19.262678746197807	0.456735970842152	4				NaN	NaN	0	NaN	10069	3643	13709
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13729	35.429	NaN	3979.3	30	0	665.99	0.214			+	-1	QHFALQDM	8	61	503.2274463582114	1004.4403397832228	2	503.2274475097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_QHFALQDM(Oxidation (M))_	REV__ENSG00000080815|ENST00000324501|PSEN1;REV__ENST00000555867.1_1_14:73673029-73685994:+|nuORF;REV__nc|ENSG00000080815|P49768-2|PSEN1;REV__nc|ENSG00000080815|P49768-6|PSEN1;REV__nc|ENSG00000080815|P49768-7|PSEN1	34.172542307311794	0.6954784234644539	4				NaN	NaN	0	NaN	10081	3646	13728
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13730	35.433	NaN	2186.7	30	0	221.08	0.106	+			46511	VEVLEYQRR	9	66	596.3278311482737	1190.6411093633474	2	596.3282470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VEVLEYQRR_	nc|ENSG00000146122|Q86T65-4|DAAM2	34.172542307311794	0.4838870758800184	4				NaN	NaN	0	NaN	10082	3646	13728
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13731	35.435	NaN	2417.7	30	0	497.28	0.106	+			30778	QDSQEGAHIR	10	61	570.7730888225459	1139.5316247118917	2	570.7737426757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QDSQEGAHIR_	nc|ENSG00000233013|P0CG42|FAM157B;nc|ENSG00000236438|C9JC47|FAM157A;nc|ENSG00000260528|P0CG43|FAM157C	37.81151784470057	0.569310847604193	4				NaN	NaN	0	NaN	10083	3646	13728
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13732	35.437	NaN	2007.8	30	0	172.31	0.035				-1	SEGKCFSVL	9	56	513.7500341631411	1025.485515393082	2	513.2532958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_SEGKC(Carbamidomethyl (C))FSVL_	ENSG00000079246|ENST00000392132|XRCC5;XRCC5|p.Q488Rfs*29|1|0.06|ENSG00000079246|chr2:216141305-216141305|C/-|frameshift_variant	31.529811441608018	0.5085848003137583	4				NaN	NaN	0	NaN	10084	3646	13728
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13745	35.465	NaN	3546.4	30	0	577.14	0.144	+			29157	NVIHNLATY	9	71	522.7775019338636	1043.5404509345271	2	522.7779541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NVIHNLATY_	ENSG00000123353|ENST00000243045|ORMDL2	56.72105179125745	0.24094814563026265	4				NaN	NaN	0	NaN	10094	3649	13744
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13760	35.497	NaN	73844	30	0	19305	0.207	+			4539	ATLAAVLQR	9	98	471.79037230988075	941.5661916865615	2	471.79010009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATLAAVLQR_	ENSG00000159399|ENST00000290573|HK2	162.25246889848123	0.0040893836092247005	4				NaN	NaN	0	NaN	10106	3652	13759
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13761	35.501	NaN	8299.8	30	0	2106.7	0.106				-1	FSVLIYSME	9	80	368.84786278939896	1103.5217589683969	3	368.8481140136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_FSVLIYSM(Oxidation (M))E_	KCNS3|p.V345M|1|0.24|ENSG00000170745|chr2:17932041-17932041|G/A|missense_variant	25.57405402267927	0.5642445186134241	4				NaN	NaN	0	NaN	10107	3652	13759
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13762	35.503	NaN	4217.8	30	0	297.62	0.106	+			36196	SELLEPVCH	9	61	513.7500341631411	1025.485515393082	2	513.7498168945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SELLEPVCH_	ENSG00000122591|ENST00000432176|HYCC1;nc|ENSG00000122591|Q9BYI3-3|HYCC1	37.15910966729921	0.4535818937225704	4				NaN	NaN	0	NaN	10108	3652	13759
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13763	35.505	NaN	3220.5	30	0	416.14	0.106	+			18294	IPNQGEILV	9	58	491.7821628476739	981.5497727621478	2	491.7819519042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IPNQGEILV_	DNM2|p.L793*|2|0.27|ENSG00000079805|chr19:10830206-10830206|C/-|frameshift_variant;DNM2|p.L793Pfs*31|1|0.35|ENSG00000079805|chr19:10830205-10830206|-/C|frameshift_variant;ENSG00000079805|ENST00000389253|DNM2;nc|ENSG00000079805|P50570-5|DNM2;nc|ENSG00000079805|P50570|DNM2	37.15910966729921	0.4535818937225704	4				NaN	NaN	0	NaN	10109	3652	13759
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13764	35.507	NaN	1779.9	30	0	139.29	0.106	+			41295	SVLNFATNR	9	61	511.27484130859375	NaN	0	511.27484130859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVLNFATNR_	ENSG00000132182|ENST00000254508|NUP210	43.650786325866115	0.2504488100985368	4				NaN	NaN	0	NaN	10110	3652	13759
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13765	35.508	NaN	2014.6	30	0	191.27	0.036				-1	 	0	53	536.2924504332832	535.2851739666831	1	536.2911987304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10111	3652	13759
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13780	35.539	NaN	15487	30	0	3799	0.214			+	26515	LTPLNMNL	8	76	458.2510140187272	914.4874751042544	2	458.2501525878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LTPLNMNL_	REV__ENST00000395603.7_1_X:76939207-76939318:-|nuORF	76.84663266511073	0.3498490246073164	4				NaN	NaN	0	NaN	10123	3655	13779
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13781	35.543	NaN	5302	30	0	1500	0.106			+	33298	RGPTAIVI	8	63	413.76057325837974	825.5065935835595	2	413.7607116699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RGPTAIVI_	REV__ENSG00000174243|ENST00000308025|DDX23	23.04248740728303	0.7814162927298575	4				NaN	NaN	0	NaN	10124	3655	13779
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13782	35.545	NaN	7313.1	30	0	1807.6	0.106	+			39701	STIPGIHILK	10	66	539.8348213978946	1077.6550898625892	2	539.8348388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STIPGIHILK_	ENSG00000016490|ENST00000394711|CLCA1	117.5257442709337	0.03082425562130952	4				NaN	NaN	0	NaN	10125	3655	13779
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13783	35.547	NaN	6240.9	30	0	1033.8	0.106	+			34873	RYTLQASTF	9	76	543.7827106373891	1085.550868341578	2	543.78271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RYTLQASTF_	ENSG00000055130|ENST00000325222|CUL1	65.46538089061403	0.16805504838372562	4				NaN	NaN	0	NaN	10126	3655	13779
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13784	35.548	NaN	1238.2	30	0	119.54	0.032				-1	CGSSCCSCCW	10	47	384.771836676798	NaN	0	384.7716369628906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C)	_CGSSC(Carbamidomethyl (C))C(Carbamidomethyl (C))SCCW_	ENST00000228741.7_1_12:96588285-96617411:+|nuORF	2.027967841256958	0.4201028297492154	4				NaN	NaN	0	NaN	10127	3655	13779
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13798	35.577	NaN	6106.5	30	0	652.96	0.214	+			23602	LANPHELSL	9	81	497.27217326443804	992.5297935956761	2	497.27178955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LANPHELSL_	ENSG00000197312|ENST00000480945|DDI2;ENST00000486680.1_1_1:15944165-15960061:+|nuORF;nc|ENSG00000197312|Q5TDH0-2|DDI2;nc|ENSG00000197312|Q5TDH0-3|DDI2	107.00750918261382	0.032051501805654005	4				NaN	NaN	0	NaN	10138	3658	13797
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13799	35.581	NaN	4507.3	30	0	522.4	0.035	+			14383	GTAIIQLPSK	10	71	514.3113163413394	1026.6080797494787	2	514.3109130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTAIIQLPSK_	ENSG00000112651|ENST00000388752|MRPL2;ENST00000485654.1_1_6:43022014-43023405:-|nuORF;MRPL2|p.M292*|1|0.49|ENSG00000112651|chr6:43054319-43054319|G/-|frameshift_variant;OBSL1-MRPL2|1|fusion	75.65223720490533	0.23114180991572172	4				NaN	NaN	0	NaN	10139	3658	13797
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13828	35.645	NaN	3492.3	30	0	476.55	0.214	+			9831	EPLHNVQVL	9	52	524.7931215417517	1047.5716901503033	2	524.7935180664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EPLHNVQVL_	BUB1|p.V819Gfs*61|1|0.11|ENSG00000169679|chr2:110642126-110642127|-/C|frameshift_variant;ENSG00000169679|ENST00000302759|BUB1;ENST00000465029.5_1_2:111419157-111435602:-|nuORF;nc|ENSG00000169679|O43683-2|BUB1;nc|ENSG00000169679|O43683-3|BUB1	63.30626980617807	0.18605348971131092	4				NaN	NaN	0	NaN	10162	3664	13827
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13829	35.648	NaN	2818.8	30	0	179.92	0.106	+			19244	KACRGCREK	9	66	582.791259765625	NaN	0	582.791259765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_KAC(Carbamidomethyl (C))RGC(Carbamidomethyl (C))REK_	ENST00000530199.5_1_11:22848753-22850842:-|nuORF	52.936696900407355	0.1864545979552969	4				NaN	NaN	0	NaN	10163	3664	13827
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13830	35.65	NaN	2907.6	30	0	269.51	0.106			+	7608	DKAYAVCYVT	10	67	566.7685168022367	NaN	0	566.7692260742188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DKAYAVCYVT_	REV__ENSG00000163913|ENST00000348417|IFT122;REV__ENST00000504653.5_1_3:129168750-129170903:+|nuORF;REV__ENST00000506507.5_1_3:129168750-129233481:+|nuORF;REV__nc|ENSG00000163913|Q9HBG6-10|IFT122;REV__nc|ENSG00000163913|Q9HBG6-11|IFT122;REV__nc|ENSG00000163913|Q9HBG6-3|IFT122;REV__nc|ENSG00000163913|Q9HBG6-4|IFT122;REV__nc|ENSG00000163913|Q9HBG6-5|IFT122;REV__nc|ENSG00000163913|Q9HBG6-6|IFT122;REV__nc|ENSG00000163913|Q9HBG6-9|IFT122	51.19269402634007	0.2980620950593832	4				NaN	NaN	0	NaN	10164	3664	13827
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13831	35.652	NaN	3580.4	30	0	400.04	0.038	+			24241	LETEYKVKIS	10	61	605.3374552172548	NaN	0	605.3375244140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LETEYKVKIS_	PYGL|p.N559S|1|0.43|ENSG00000100504|chr14:50912248-50912248|T/C|missense_variant	30.317721548370564	0.4006274431774794	4				NaN	NaN	0	NaN	10165	3664	13827
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13846	35.683	NaN	3178.7	30	0	252.53	0.144				-1	LKGMVTGLKL	10	69	538.32861328125	NaN	0	538.32861328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LKGM(Oxidation (M))VTGLKL_	ENSG00000172456|ENST00000303721|FGGY;ENST00000466791.5_1_1:60103921-60146476:+|nuORF;ENST00000493891.5_1_1:60103921-60223658:+|nuORF;nc|ENSG00000172456|Q96C11-4|FGGY;nc|ENSG00000172456|Q96C11-5|FGGY;nc|ENSG00000172456|Q96C11-6|FGGY	56.43379154798735	0.2634004003759929	4				NaN	NaN	0	NaN	10177	3667	13845
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13859	35.712	NaN	3360	30	0	436.33	0.214			+	-1	LSSCQKYSRG	10	57	593.2870530484117	1184.5595531636234	2	593.2870483398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_LSSC(Carbamidomethyl (C))QKYSRG_	REV__IKZF2|p.R208C|1|0.33|ENSG00000030419|chr2:213022083-213022083|G/A|missense_variant	17.468008924990375	0.7276870902328821	4				NaN	NaN	0	NaN	10187	3670	13858
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13860	35.715	NaN	2571	30	0	337.21	0.106	+			50885	YFPINYKI	8	54	529.2913115449498	NaN	0	529.7587280273438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YFPINYKI_	ENSG00000157368|ENST00000288098|IL34;nc|ENSG00000157368|Q6ZMJ4-2|IL34	42.47446043378293	1.7418937515398478	4				NaN	NaN	0	NaN	10188	3670	13858
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13861	35.717	NaN	4014.8	30	0	418.07	0.106	+			24331	LFISTTPDSRK	11	63	632.8483560290114	1263.6821591248226	2	632.8484497070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LFISTTPDSRK_	ENSG00000116711|ENST00000367466|PLA2G4A;ENST00000466600.1_1_1:186823486-186908166:+|nuORF;PLA2G4A|p.G198Vfs*11|1|0.26|ENSG00000116711|chr1:186932793-186932793|G/-|frameshift_variant	63.53385203322761	0.2919106290768168	4				NaN	NaN	0	NaN	10189	3670	13858
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13862	35.719	NaN	6325.3	30	0	582.53	0.042			+	29555	PEREQHWRLIR	11	79	760.4169311523438	NaN	0	760.4169311523438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PEREQHWRLIR_	REV__CON__Q99PS0	13.45404412870281	0.456735970842152	4				NaN	NaN	0	NaN	10190	3670	13858
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13878	35.752	NaN	9256.6	30	0	1139.6	0.214	+			19884	KEESIVSSL	9	75	496.26929050172737	990.5240280702548	2	496.268798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEESIVSSL_	ENSG00000242247|ENST00000263245|ARFGAP3;nc|ENSG00000242247|Q9NP61-2|ARFGAP3	106.68306549817024	0.032382560583716295	4				NaN	NaN	0	NaN	10203	3673	13877
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13879	35.756	NaN	16470	30	0	2656.8	0.106	+			11278	FIVTASRDGI	10	79	539.7983412194448	1077.5821295056894	2	539.7986450195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FIVTASRDGI_	ENSG00000196455|ENST00000356763|PIK3R4	82.7504851949679	0.1731497355276012	4				NaN	NaN	0	NaN	10204	3673	13877
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13880	35.758	NaN	5719.8	30	0	1250.7	0.106	+			10350	ETTVSRPVLS	10	54	544.801554366887	1087.5885558005739	2	544.8013916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ETTVSRPVLS_	CCDC150|p.E447Sfs*3|1|0.16|ENSG00000144395|chr2:196676625-196676625|A/-|frameshift_variant;CCDC150|p.R59Efs*10|1|0.27|ENSG00000144395|chr2:196646498-196646498|A/-|frameshift_variant;ENSG00000144395|ENST00000389175|CCDC150;ENST00000471546.5_1_2:197504460-197531652:+|nuORF;ENST00000498512.5_1_2:197504460-197537114:+|nuORF	47.227680397652996	0.4825456260682108	4				NaN	NaN	0	NaN	10205	3673	13877
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13881	35.76	NaN	4286.5	30	0	447.59	0.106				-1	LTSTSVEHI	9	78	514.7673381184137	1027.5201233036273	2	514.7666625976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LTSTSVEHI_	DCTN2|p.D201Rfs*2|1|0.39|ENSG00000175203|chr12:57534022-57534023|-/G|frameshift_variant;ENSG00000175203|ENST00000548249|DCTN2;ENST00000547345.5_1_12:57928805-57940846:-|nuORF;ENST00000547480.5_1_12:57929463-57940846:-|nuORF;ENST00000551611.5_1_12:57928878-57929622:-|nuORF;nc|ENSG00000175203|Q13561-2|DCTN2;nc|ENSG00000175203|Q13561-3|DCTN2	45.9519527083369	0.35044536499095585	4				NaN	NaN	0	NaN	10206	3673	13877
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13882	35.762	NaN	3367.6	30	0	412.84	0.106			+	28001	MVVHPATN	8	58	434.7209773529155	NaN	0	434.72119140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MVVHPATN_	REV__ENST00000470383.1_1_1:24124993-24125323:-|nuORF	28.2542754592877	1.7418937515398478	4				NaN	NaN	0	NaN	10207	3673	13877
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13883	35.763	NaN	3516	30	0	270.02	0.106	+			17528	IDNIATLQL	9	66	500.78784064782525	999.5611283624505	2	500.7876892089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IDNIATLQL_	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42|TTN;TTN|p.A12650Gfs*4|1|0.4|ENSG00000155657|chr2:178633489-178633490|-/T|frameshift_variant;TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;TTN|p.D20259Rfs*40|1|0.44|ENSG00000155657|chr2:178583105-178583106|-/T|frameshift_variant;TTN|p.D21555Ifs*6|1|0.33|ENSG00000155657|chr2:178576659-178576659|G/-|frameshift_variant;TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;TTN|p.D9026Afs*9|1|0.26|ENSG00000155657|chr2:178711205-178711208|CTGT/-|frameshift_variant;TTN|p.E15132Sfs*22|1|0.27|ENSG00000155657|chr2:178612094-178612094|C/-|frameshift_variant;TTN|p.E20392Dfs*6|1|0.04|ENSG00000155657|chr2:178582357-178582358|-/TTTAAAATTA|frameshift_variant;TTN|p.E20392Kfs*4|1|0.02|ENSG00000155657|chr2:178582359-178582360|-/TTTT|frameshift_variant;TTN|p.E9224Gfs*8|1|0.04|ENSG00000155657|chr2:178709697-178709698|-/TCTTATGATATCTTGAC|frameshift_variant;TTN|p.F18705Lfs*8|1|0.37|ENSG00000155657|chr2:178590687-178590687|A/-|frameshift_variant;TTN|p.G12742Vfs*2|1|0.05|ENSG00000155657|chr2:178632983-178632983|C/-|frameshift_variant;TTN|p.G14712Dfs*11|1|0.37|ENSG00000155657|chr2:178614341-178614341|G/-|frameshift_variant;TTN|p.G19920Afs*12|1|0.42|ENSG00000155657|chr2:178584961-178584961|G/-|frameshift_variant;TTN|p.G22029Efs*22|2|0.13|ENSG00000155657|chr2:178575125-178575125|T/-|frameshift_variant;TTN|p.I10495Nfs*4|1|0.37|ENSG00000155657|chr2:178685288-178685289|-/T|frameshift_variant;TTN|p.I24998Nfs*2|1|0.35|ENSG00000155657|chr2:178566216-178566217|-/T|frameshift_variant;TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;TTN|p.I9225Cfs*34|1|0.06|ENSG00000155657|chr2:178709695-178709696|-/ATATCCATGAGCA|frameshift_variant;TTN|p.K10923Rfs*104|2|0.23|ENSG00000155657|chr2:178679362-178679362|T/-|frameshift_variant;TTN|p.K11381Nfs*25|1|0.07|ENSG00000155657|chr2:178671133-178671133|T/-|frameshift_variant;TTN|p.K11556Sfs*15|1|0.39|ENSG00000155657|chr2:178652287-178652287|T/-|frameshift_variant;TTN|p.K14271Qfs*5|1|0.02|ENSG00000155657|chr2:178617351-178617352|-/G|frameshift_variant;TTN|p.K26626Nfs*34|1|0.34|ENSG00000155657|chr2:178561331-178561331|T/-|frameshift_variant;TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant;TTN|p.N13487Tfs*49|1|0.34|ENSG00000155657|chr2:178621335-178621335|T/-|frameshift_variant;TTN|p.N15496Ifs*16|1|0.09|ENSG00000155657|chr2:178610116-178610116|T/-|frameshift_variant;TTN|p.N7648Tfs*27|1|0.32|ENSG00000155657|chr2:178719598-178719598|T/-|frameshift_variant;TTN|p.N8964Tfs*27|1|0.11|ENSG00000155657|chr2:178711988-178711988|T/-|frameshift_variant;TTN|p.P16126Rfs*3|1|0.25|ENSG00000155657|chr2:178607301-178607302|TG/-|frameshift_variant;TTN|p.P22810Hfs*10|1|0.03|ENSG00000155657|chr2:178572780-178572781|-/AAAT|frameshift_variant;TTN|p.V10632Yfs*16|1|0.16|ENSG00000155657|chr2:178683254-178683254|T/-|frameshift_variant;TTN|p.V11008Sfs*13|1|0.33|ENSG00000155657|chr2:178678146-178678147|-/T|frameshift_variant;TTN|p.V11345Ffs*4|1|0.4|ENSG00000155657|chr2:178672044-178672044|T/-|frameshift_variant;TTN|p.V13823*|1|0.28|ENSG00000155657|chr2:178620027-178620027|C/-|frameshift_variant;TTN|p.V22573Cfs*4|2|0.31|ENSG00000155657|chr2:178573492-178573492|C/-|frameshift_variant;TTN|p.V27442Cfs*4|1|0.05|ENSG00000155657|chr2:178558107-178558108|-/A|frameshift_variant	42.86426827375447	0.38666266728046506	4				NaN	NaN	0	NaN	10208	3673	13877
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13884	35.765	NaN	6522	30	0	680.75	0.041	+			21486	KNKKKKEYLNE	11	82	711.4088525093754	1420.8031520855507	2	711.4056396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KNKKKKEYLNE_	ENSG00000131732|ENST00000407610|ZCCHC9	30.317721548370564	0.6717830234747728	4				NaN	NaN	0	NaN	10209	3673	13877
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13897	35.793	NaN	2448.4	30	0	297.73	0.214	+			27800	MSDTTFKAL	9	57	507.252746167253	1012.490939401306	2	507.2522888183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MSDTTFKAL_	CAPZA1|p.R259H|1|0.31|ENSG00000116489|chr1:112670047-112670047|G/A|missense_variant;CAPZA2|p.R259C|1|0.25|ENSG00000198898|chr7:116917781-116917781|C/T|missense_variant;ENSG00000116489|ENST00000263168|CAPZA1;ENSG00000198898|ENST00000361183|CAPZA2;ENST00000426421.5_1_7:116544367-116557918:+|nuORF;ENST00000466066.1_1_1:113202257-113212751:+|nuORF;ENST00000565906.2_1_15:89532752-89533049:-|nuORF	61.691277971877994	0.19951612995419254	4				NaN	NaN	0	NaN	10219	3676	13896
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13898	35.797	NaN	3197.8	30	0	338.76	0.106	+			28088	NAFEVAEKY	9	68	535.7614697931641	1069.5083866531281	2	535.7615966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NAFEVAEKY_	ENSG00000130402|ENST00000252699|ACTN4;ENST00000588618.5_1_19:39138385-39212431:+|nuORF	58.2462437865262	0.22823408064396822	4				NaN	NaN	0	NaN	10220	3676	13896
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13899	35.799	NaN	2451.7	30	0	415.78	0.036			+	33785	RQDWTLHF	8	58	551.7768481150356	1101.539143296871	2	551.7772827148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RQDWTLHF_	REV__ENST00000473097.5_1_1:1288733-1289815:-|nuORF	33.51558372728122	0.7005509609380386	4				NaN	NaN	0	NaN	10221	3676	13896
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13911	35.823	NaN	3531.5	30	0	429.42	0.214				-1	CHDCLVKY	8	61	547.7406380718976	1093.466723210595	2	547.740966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))HDC(Carbamidomethyl (C))LVKY_	ENSG00000189051|ENST00000399398|RNF222	31.954861631926434	0.7126016770032289	4				NaN	NaN	0	NaN	10230	3679	13910
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13912	35.827	NaN	3121.7	30	0	325.7	0.106	+			36520	SFDVMKQNPM	10	50	598.7741193538008	1195.5336857744014	2	598.7740478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SFDVMKQNPM_	ENSG00000198075|ENST00000272452|SULT1C4;nc|ENSG00000196228|Q6IMI6|SULT1C3;nc|ENSG00000198075|O75897-2|SULT1C4	32.81241826257853	0.6118718159329168	4				NaN	NaN	0	NaN	10231	3679	13910
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13913	35.829	NaN	2705.4	30	0	300.35	0.106			+	11847	FTALCPARPL	10	54	544.801554366887	1087.5885558005739	2	544.8014526367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FTALCPARPL_	REV__SSBP3|p.N49Tfs*95|3|0.3|ENSG00000157216|chr1:54404621-54404621|T/-|frameshift_variant	37.50817390946774	0.5721060100277453	4				NaN	NaN	0	NaN	10232	3679	13910
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13914	35.83	NaN	3597.1	30	0	710.66	0.106	+			19248	KADGGKEQLTY	11	73	605.3084832791205	1208.602413625041	2	605.8103637695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KADGGKEQLTY_	ENSG00000148308|ENST00000372097|GTF3C5;ENST00000489842.1_1_9:135931263-135933364:+|nuORF;nc|ENSG00000148308|Q9Y5Q8-2|GTF3C5;nc|ENSG00000148308|Q9Y5Q8-3|GTF3C5	30.568863376406313	0.6691487505135859	4				NaN	NaN	0	NaN	10233	3679	13910
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13915	35.832	NaN	2461.7	30	0	218.04	0.035	+			23571	LALLGAPPPK	10	51	488.8132259211786	975.6118989091573	2	488.8130798339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LALLGAPPPK_	ENST00000595973.2_1_19:18493140-18496906:+|nuORF	45.9519527083369	0.4943008177357963	4				NaN	NaN	0	NaN	10234	3679	13910
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13943	35.893	NaN	13313	30	0	3155.2	0.214	+			20379	KESTLHLVL	9	66	520.3112007070349	1038.6078484808697	2	520.31103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KESTLHLVL_	ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000392399.3_1_2:137087013-137087097:-|nuORF;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;UBB|p.D191Tfs*35|2|0.18|ENSG00000170315|chr17:16382471-16382471|C/-|frameshift_variant;UBB|p.D191Tfs*35|2|0.18|ENSG00000170315|chr17:16382471-16382471|C/-|frameshift_variant	85.16082228582465	0.07850854922700509	4				NaN	NaN	0	NaN	10256	3685	13942
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13944	35.896	NaN	3087.6	30	0	299.21	0.106	+			39481	STFFYPKLK	9	65	565.8161278044857	1129.6177026757714	2	565.8153076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STFFYPKLK_	ENSG00000163904|ENST00000296257|SENP2;nc|ENSG00000163904|Q9HC62-2|SENP2	64.20726635412375	0.17854274437659667	4				NaN	NaN	0	NaN	10257	3685	13942
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13945	35.898	NaN	3568.2	30	0	378.75	0.106				-1	FMFGSYNKK	9	62	569.2714901290727	1136.5284273249454	2	569.7725830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_FM(Oxidation (M))FGSYNKK_	ENST00000424137.2_1_20:34340744-34341539:+|nuORF	29.14955571784316	0.5308295550522326	4				NaN	NaN	0	NaN	10258	3685	13942
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13946	35.9	NaN	2816.4	30	0	291.63	0.035	+			48123	VSVHRHRH	8	60	514.2857868131513	NaN	0	514.2860107421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSVHRHRH_	ENST00000578199.5_1_17:37851408-37864671:+|nuORF	28.2542754592877	1.7418937515398478	4				NaN	NaN	0	NaN	10259	3685	13942
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13957	35.925	NaN	4257.1	30	0	350.1	0.214	+			11677	FQVNHTVAL	9	61	514.780287427291	1027.546021921382	2	514.77978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FQVNHTVAL_	ENSG00000130204|ENST00000426677|TOMM40;nc|ENSG00000130204|O96008-2|TOMM40	52.936696900407355	0.27249468807391813	4				NaN	NaN	0	NaN	10267	3688	13956
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13958	35.929	NaN	4106	30	0	1006.3	0.106				-1	FCMRKLVL	8	71	361.53248966664296	1081.5756396001289	3	361.53265380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_FC(Carbamidomethyl (C))M(Oxidation (M))RKLVL_	ENST00000275227.8_2_6:133092182-133093307:-|nuORF	26.79610172149135	0.7524337208463756	4				NaN	NaN	0	NaN	10268	3688	13956
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13959	35.931	NaN	3029.8	30	0	485.64	0.106			+	43299	TFSAERTQI	9	67	526.772635220256	NaN	0	526.772705078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TFSAERTQI_	REV__ENST00000471810.5_1_2:225751209-225846977:-|nuORF	44.377184641726394	0.24544280798894275	4				NaN	NaN	0	NaN	10269	3688	13956
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13960	35.932	NaN	2127.7	30	0	363.7	0.106	+			8170	EAANEHGT	8	45	414.6780484998266	827.3415440664533	2	414.6784362792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EAANEHGT_	CDON|p.P586Hfs*28|1|0.1|ENSG00000064309|chr11:126005853-126005853|G/-|frameshift_variant;CDON|p.S875Rfs*8|1|0.36|ENSG00000064309|chr11:125994309-125994309|A/-|frameshift_variant;ENSG00000064309|ENST00000531738|CDON;ENST00000531830.1_1_11:125875536-125880518:-|nuORF;nc|ENSG00000064309|Q4KMG0|CDON	33.51558372728122	0.7005509609380386	4				NaN	NaN	0	NaN	10270	3688	13956
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13961	35.934	NaN	3065.3	30	0	306.77	0.036	+			36211	SELQSIQRL	9	61	537.301599306476	NaN	0	537.3015747070312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SELQSIQRL_	ENSG00000135111|ENST00000349155|TBX3;nc|ENSG00000135111|O15119-3|TBX3;nc|ENSG00000135111|O15119|TBX3	70.8162118820467	0.10318768208603292	4				NaN	NaN	0	NaN	10271	3688	13956
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13974	35.961	NaN	5840.2	30	0	705.14	0.145	+			14674	GTIFAELATKK	11	73	589.8433448339207	1177.6721367346413	2	589.8436279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTIFAELATKK_	ENSG00000170312|ENST00000395284|CDK1;nc|ENSG00000170312|P06493-2|CDK1	54.343338949951054	0.37394860514808087	4				NaN	NaN	0	NaN	10281	3691	13973
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13987	35.99	NaN	17058	30	0	2126.6	0.214	+			28804	NPHSQGLVTF	10	86	550.2802699901849	1098.5459870471698	2	550.2800903320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NPHSQGLVTF_	ENSG00000167608|ENST00000619895|TMC4;nc|ENSG00000167608|Q7Z404-1|TMC4;nc|ENSG00000167608|Q7Z404|TMC4;TMC4|p.F240Lfs*221|1|0.42|ENSG00000167608|chr19:54168267-54168268|AA/-|frameshift_variant;TMC4|p.Q383Rfs*6|1|0.37|ENSG00000167608|chr19:54163872-54163872|G/-|frameshift_variant	91.26522074875469	0.12383023862516404	4				NaN	NaN	0	NaN	10291	3694	13986
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13988	35.994	NaN	7735.9	30	0	2724	0.106				-1	SMEVYVTIF	9	75	368.84786278939896	1103.5217589683969	3	368.847900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_SM(Oxidation (M))EVYVTIF_	ENST00000303221.9_1_5:49694656-49694779:-|nuORF	19.996771675451527	0.6112419832031292	4				NaN	NaN	0	NaN	10292	3694	13986
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13989	35.996	NaN	7256.8	30	0	863.33	0.106	+			41078	SVILPILKK	9	69	505.8525659800443	1009.6905790268886	2	505.85211181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVILPILKK_	ENSG00000187231|ENST00000428443|SESTD1;ENST00000486468.1_1_2:180027226-180056568:-|nuORF;SESTD1|p.G438Vfs*20|2|0.26|ENSG00000187231|chr2:179121901-179121901|T/-|frameshift_variant;SESTD1|p.K13Nfs*2|1|0.47|ENSG00000187231|chr2:179191803-179191803|T/-|frameshift_variant	54.722347961057174	0.257609425301511	4				NaN	NaN	0	NaN	10293	3694	13986
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	13990	35.998	NaN	2547.8	30	0	251.93	0.035	+			15482	GVAGAVAVFPK	11	57	508.29972296993174	NaN	0	508.2996520996094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GVAGAVAVFPK_	ENSG00000163125|ENST00000369068|RPRD2;ENST00000492220.1_1_1:150381497-150445807:+|nuORF;nc|ENSG00000163125|Q5VT52-2|RPRD2;nc|ENSG00000163125|Q5VT52-3|RPRD2;RPRD2|p.G1389Efs*24|1|0.39|ENSG00000163125|chr1:150473110-150473110|G/-|frameshift_variant;RPRD2|p.L1399Wfs*14|2|0.26|ENSG00000163125|chr1:150473136-150473136|C/-|frameshift_variant;RPRD2|p.T1353Pfs*60|1|0.13|ENSG00000163125|chr1:150473001-150473001|C/-|frameshift_variant	47.227680397652996	0.33523056580093125	4				NaN	NaN	0	NaN	10294	3694	13986
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14004	36.026	NaN	5276.7	30	0	439.86	0.214	+			27231	MEKVLAGETL	10	62	545.7947906462299	1089.5750283592597	2	545.7944946289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MEKVLAGETL_	ENSG00000129351|ENST00000588657|ILF3;ENST00000587928.5_1_19:10781281-10792148:+|nuORF;nc|ENSG00000129351|Q12906-2|ILF3;nc|ENSG00000129351|Q12906-3|ILF3;nc|ENSG00000129351|Q12906-4|ILF3;nc|ENSG00000129351|Q12906-5|ILF3;nc|ENSG00000129351|Q12906-6|ILF3;nc|ENSG00000129351|Q12906|ILF3	75.65223720490533	0.23114180991572172	4				NaN	NaN	0	NaN	10305	3697	14003
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14005	36.029	NaN	6206.2	30	0	630.27	0.106	+			47957	VSMLNVYLK	9	74	541.79911183293	1081.5836707326598	2	541.798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_VSM(Oxidation (M))LNVYLK_	ENSG00000111775|ENST00000229379|COX6A1;ENST00000550009.1_1_12:120875908-120876378:+|nuORF	72.87924865735499	0.12833875048249987	4				NaN	NaN	0	NaN	10306	3697	14003
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14006	36.031	NaN	4001.1	30	0	460.61	0.04			+	-1	TQVLCDKPEDC	11	58	682.7944960245396	NaN	0	682.7940063476562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_TQVLC(Carbamidomethyl (C))DKPEDC(Carbamidomethyl (C))_	REV__nc|ENSG00000118523|P29279-2|CCN2	22.579656572578934	0.456735970842152	4				NaN	NaN	0	NaN	10307	3697	14003
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14017	36.056	NaN	2148.3	30	0	843.75	0.144			+	-1	CMARAGRMF	9	44	558.2474162587762	NaN	0	558.247802734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_C(Carbamidomethyl (C))M(Oxidation (M))ARAGRMF_	REV__PIGO|p.L432M|1|0.35|ENSG00000165282|chr9:35092593-35092593|G/T|missense_variant	24.20275056022122	0.35506675290109213	4				NaN	NaN	0	NaN	10315	3700	14016
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14029	36.083	NaN	7180.1	30	0	893.85	0.214			+	8866	EERLVVLL	8	62	485.80055371870367	969.5865545042074	2	485.8000183105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EERLVVLL_	REV__ENSG00000215912|ENST00000401095|TTC34	53.351449002276354	0.5676011784961348	4				NaN	NaN	0	NaN	10324	3703	14028
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14030	36.087	NaN	3152.3	30	0	236.7	0.106	+			41412	SVMSTVEWNK	10	73	590.7875758343282	1179.5605987354563	2	590.7877197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVMSTVEWNK_	BZW1|p.S325Rfs*19|1|0.04|ENSG00000082153|chr2:200819989-200819990|-/ACAATATAGAA|frameshift_variant;ENSG00000082153|ENST00000409600|BZW1;nc|ENSG00000082153|Q7L1Q6-3|BZW1;nc|ENSG00000082153|Q7L1Q6-4|BZW1	76.16968421966216	0.22691431239609447	4				NaN	NaN	0	NaN	10325	3703	14028
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14031	36.089	NaN	2613.7	30	0	413.49	0.106	+			51264	YRGKCSVTL	9	61	513.7749633789062	NaN	0	513.7749633789062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YRGKCSVTL_	ENST00000532239.1_1_11:62365783-62365918:-|nuORF	34.172542307311794	0.30503706118289736	4				NaN	NaN	0	NaN	10326	3703	14028
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14032	36.091	NaN	2633.5	30	0	451.86	0.036	+			24931	LKSTDYTLQ	9	56	534.7830200195312	NaN	0	534.7830200195312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LKSTDYTLQ_	ENST00000222573.4_1_7:20449902-20450115:+|nuORF	39.252832667884924	0.27938773122138094	4				NaN	NaN	0	NaN	10327	3703	14028
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14045	36.119	NaN	2234.3	30	0	227.63	0.143			+	48735	VTVEALVEDA	10	59	523.2744610926062	1044.5343692520123	2	523.2750854492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTVEALVEDA_	REV__DNAH8|p.D4227Afs*7|1|0.04|ENSG00000124721|chr6:39008929-39008930|-/CAGTGTT|frameshift_variant;REV__DNAH8|p.Q3444Rfs*16|1|0.31|ENSG00000124721|chr6:38926073-38926073|C/-|frameshift_variant;REV__DNAH8|p.V3263Sfs*23|1|0.16|ENSG00000124721|chr6:38918047-38918048|-/A|frameshift_variant;REV__DNAH8|p.V3263Sfs*28|1|0.47|ENSG00000124721|chr6:38918048-38918048|A/-|frameshift_variant;REV__ENSG00000124721|ENST00000327475|DNAH8;REV__nc|ENSG00000124721|Q96JB1-2|DNAH8;REV__nc|ENSG00000124721|Q96JB1|DNAH8	34.172542307311794	0.6007644933930345	4				NaN	NaN	0	NaN	10337	3706	14044
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14056	36.146	NaN	7682.8	30	0	4701.5	0.214				-1	 	0	52	340.1770169766304	678.3394810200608	2	340.1772766113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10345	3709	14055
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14057	36.149	NaN	3177	30	0	425.13	0.106				-1	 	0	66	336.53410826205584	1006.5804953863676	3	336.5342102050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10346	3709	14055
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14058	36.151	NaN	2975.3	30	0	429.81	0.036				-1	 	0	62	535.2534704521391	1068.4923879710782	2	535.2526245117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10347	3709	14055
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14069	36.176	NaN	2954.1	30	0	176.67	0.213	+			25613	LQNEPLPERL	10	69	604.8355836542016	NaN	0	604.8349609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LQNEPLPERL_	ENSG00000124214|ENST00000371856|STAU1;nc|ENSG00000124214|O95793-2|STAU1;nc|ENSG00000124214|O95793-3|STAU1	42.33807565288922	0.3540422799631949	4				NaN	NaN	0	NaN	10355	3712	14068
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14070	36.18	NaN	2531.8	30	0	259.57	0.036				-1	GFLGTGTWIL	10	64	553.7966602205232	1105.5787675078464	2	553.7968139648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))GFLGTGTWIL_	ENSG00000104112|ENST00000220478|SCG3;SCG3|p.D73Pfs*12|1|0.04|ENSG00000104112|chr15:51683253-51683263|TGATAACTTGA/-|frameshift_variant	37.15910966729921	0.575322462179216	4				NaN	NaN	0	NaN	10356	3712	14068
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14083	36.207	NaN	9508	30	0	1509.7	0.214	+			121	AAFDGGFTVK	10	79	506.7585871979352	1011.5026214626704	2	506.7586669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAFDGGFTVK_	ENSG00000102910|ENST00000285737|LONP2;ENST00000564259.1_1_16:48382051-48395504:+|nuORF;nc|ENSG00000102910|Q86WA8-2|LONP2	65.15724298150197	0.31893571707528906	4				NaN	NaN	0	NaN	10366	3715	14082
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14084	36.211	NaN	11275	30	0	2413.1	0.106	+			49708	VYLPTHTSL	9	74	515.7821287095607	1029.5497044859212	2	515.7822875976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYLPTHTSL_	ENSG00000007944|ENST00000356840|MYLIP	63.30626980617807	0.18605348971131092	4				NaN	NaN	0	NaN	10367	3715	14082
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14085	36.213	NaN	6522.3	30	0	531.49	0.106	+			31275	QHVQGSPFTV	10	74	550.2802699901849	1098.5459870471698	2	550.2800903320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QHVQGSPFTV_	ENSG00000134253|ENST00000256649|TRIM45;nc|ENSG00000134253|Q9H8W5-2|TRIM45	75.04331003522576	0.23611669241777622	4				NaN	NaN	0	NaN	10368	3715	14082
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14086	36.215	NaN	7094.4	30	0	1257.9	0.106	+			18102	IKTTDTYIE	9	68	542.2829218229914	1082.5512907127827	2	542.2831420898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IKTTDTYIE_	tr|U7T2P5|U7T2P5_FUSNUUvrABCsystemproteinBOS=FusobacteriumnucleatumCTI-5OX=1316586GN=uvrBPE=3SV=1	51.33545320467046	0.2872990594074956	4				NaN	NaN	0	NaN	10369	3715	14082
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14087	36.217	NaN	5143.6	30	0	827.79	0.106	+			14082	GSLFLQTPK	9	64	495.78509403992945	989.5556351466589	2	495.7845153808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GSLFLQTPK_	ENSG00000111716|ENST00000350669|LDHB;ENST00000470280.1_1_12:21796836-21807485:-|nuORF	80.91624569148213	0.09358672614454815	4				NaN	NaN	0	NaN	10370	3715	14082
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14088	36.218	NaN	5787.1	30	0	849.67	0.106	+			1495	AFSLPALPL	9	67	464.77968132746275	927.5448097217255	2	464.7770690917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AFSLPALPL_	CDC23|p.L234Sfs*23|1|0.44|ENSG00000094880|chr5:138198737-138198738|-/A|frameshift_variant;ENSG00000094880|ENST00000394886|CDC23;ENST00000482948.5_1_5:137536747-137548896:-|nuORF;nc|ENSG00000094880|Q9UJX2-2|CDC23	47.91560031466742	0.327412564698279	4				NaN	NaN	0	NaN	10371	3715	14082
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14089	36.22	NaN	5508.4	30	0	907.11	0.036			+	23964	LDTENMISGD	10	71	555.7356885222048	1109.4568241112095	2	555.7352294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_LDTENM(Oxidation (M))ISGD_	REV__ENSG00000145817|ENST00000274496|YIPF5;REV__ENSG00000177752|ENST00000415895|YIPF7;REV__ENST00000508754.1_1_5:143543641-143549519:-|nuORF;REV__nc|ENSG00000145817|Q969M3-2|YIPF5;REV__nc|ENSG00000145817|Q969M3-3|YIPF5;REV__nc|ENSG00000177752|Q8N8F6-2|YIPF7	60.11826168202944	0.36476464221954025	4				NaN	NaN	0	NaN	10372	3715	14082
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14102	36.247	NaN	9132.1	30	0	1409.5	0.214	+			7744	DMSPGLTDSTA	11	76	555.7356885222048	1109.4568241112095	2	555.735595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_DM(Oxidation (M))SPGLTDSTA_	RPUSD2|p.L435M|1|0.24|ENSG00000166133|chr15:40573926-40573926|C/A|missense_variant	69.6276240434122	0.23884409287757344	4				NaN	NaN	0	NaN	10382	3718	14101
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14103	36.251	NaN	7380.8	30	0	814.62	0.106				-1	FQNCSQDSL	9	73	549.730058705758	NaN	0	549.7304077148438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_FQNC(Carbamidomethyl (C))SQDSL_	ENST00000400199.5_1_21:16415843-16437190:-|nuORF	35.61828744233558	0.29773779453147337	4				NaN	NaN	0	NaN	10383	3718	14101
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14104	36.253	NaN	3606.3	30	0	409.01	0.106			+	47236	VMLQELPPI	9	71	347.200885215527	NaN	0	346.90216064453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VMLQELPPI_	REV__ENSG00000075884|ENST00000295095|ARHGAP15;REV__ENST00000552641.5_1_2:143913059-144194625:+|nuORF	49.44154591367651	0.21054156626303966	4				NaN	NaN	0	NaN	10384	3718	14101
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14105	36.255	NaN	3440.4	30	0	505.49	0.106			+	45272	TVQMCPQGV	9	60	481.7242431640625	NaN	0	481.7242431640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TVQMCPQGV_	REV__ENSG00000196511|ENST00000360057|TPK1;REV__ENST00000378098.8_1_7:144150640-144304024:-|nuORF;REV__ENST00000482940.5_1_7:144150752-144304024:-|nuORF;REV__nc|ENSG00000196511|Q9H3S4-2|TPK1	26.69291269510374	0.34280015626154364	4				NaN	NaN	0	NaN	10385	3718	14101
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14106	36.257	NaN	4800.5	30	0	449.19	0.106	+			19021	IWKRLNDHGK	10	78	633.8555908203125	NaN	0	633.8555908203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IWKRLNDHGK_	ENSG00000063245|ENST00000270460|EPN1;EPN1|p.G278Afs*164|1|0.5|ENSG00000063245|chr19:55691818-55691818|G/-|frameshift_variant;EPN1|p.P456Hfs*33|1|0.17|ENSG00000063245|chr19:55694823-55694823|C/-|frameshift_variant;EPN1|p.T467Pfs*22|1|0.36|ENSG00000063245|chr19:55694854-55694854|C/-|frameshift_variant;nc|ENSG00000063245|Q9Y6I3-1|EPN1;nc|ENSG00000063245|Q9Y6I3-3|EPN1	37.81151784470057	0.3760215235790741	4				NaN	NaN	0	NaN	10386	3718	14101
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14107	36.259	NaN	2475.2	30	0	130.89	0.106	+			10485	EVRLVLCGE	9	62	509.27142333984375	NaN	0	509.27142333984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EVRLVLCGE_	DDX60L|p.A1208Vfs*33|1|0.16|ENSG00000181381|chr4:168395993-168395994|-/CTTTGACA|frameshift_variant;DDX60L|p.F1291Lfs*11|1|0.38|ENSG00000181381|chr4:168391582-168391582|A/-|frameshift_variant;DDX60L|p.N1040Kfs*4|1|0.03|ENSG00000181381|chr4:168406043-168406044|-/AT|frameshift_variant;DDX60L|p.N1168Tfs*25|2|0.3|ENSG00000181381|chr4:168396113-168396113|T/-|frameshift_variant;DDX60L|p.N1642Mfs*9|1|0.2|ENSG00000181381|chr4:168371615-168371615|T/-|frameshift_variant;DDX60L|p.R1122Efs*29|1|0.05|ENSG00000181381|chr4:168400953-168400953|T/-|frameshift_variant;ENSG00000181381|ENST00000682922|DDX60L;nc|ENSG00000181381|Q5H9U9-2|DDX60L	31.529811441608018	0.3183796599642538	4				NaN	NaN	0	NaN	10387	3718	14101
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14108	36.26	NaN	3619.7	30	0	484	0.037			+	51256	YQTSTTCNNC	10	57	567.71435546875	NaN	0	567.71435546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YQTSTTCNNC_	REV__L1PB1_dup10508|chr13:43056899-43059152:-|2.941020511291588|0.4940460713329822|2.57|483.0|14|1|sense	17.468008924990375	0.4201028297492154	4				NaN	NaN	0	NaN	10388	3718	14101
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14137	36.323	NaN	15389	30	0	2284.3	0.145	+			45572	TYMGHTGAVW	10	90	561.7555865614154	1121.4966201896307	2	561.75537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TYMGHTGAVW_	ENSG00000084623|ENST00000677711|EIF3I;ENST00000474371.1_1_1:32688150-32694122:+|nuORF;ENST00000489353.5_1_1:32688042-32691823:+|nuORF	84.9155231211612	0.16018353804806162	4				NaN	NaN	0	NaN	10411	3724	14136
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14154	36.358	NaN	13107	30	0	1794	0.214	+			17599	IEFKETQAL	9	74	539.792833415619	1077.571113898038	2	539.7920532226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IEFKETQAL_	EIF4A2|p.Q209Lfs*23|1|0.03|ENSG00000156976|chr3:186786269-186786270|-/ACTGTCATTTCTAGATCTAC|frameshift_variant;ENSG00000156976|ENST00000323963|EIF4A2;ENST00000465032.5_1_3:186501384-186502902:+|nuORF;ENST00000465267.5_1_3:186501384-186502902:+|nuORF;ENST00000485101.5_1_3:186502728-186502902:+|nuORF;nc|ENSG00000156976|Q14240-2|EIF4A2	117.81106730687013	0.02252488733980868	4				NaN	NaN	0	NaN	10425	3727	14153
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14155	36.362	NaN	8190.8	30	0	2915.1	0.037			+	-1	AYFLHMVAH	9	89	368.84786278939896	1103.5217589683969	3	368.84765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_AYFLHM(Oxidation (M))VAH_	REV__ENSG00000011376|ENST00000645846|LARS2;REV__LARS2|p.M583Wfs*51|2|0.31|ENSG00000011376|chr3:45500561-45500561|A/-|frameshift_variant	29.14955571784316	0.5308295550522326	4				NaN	NaN	0	NaN	10426	3727	14153
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14170	36.392	NaN	16987	30	0	3582.2	0.214	+			14894	GTLSSWNLK	9	75	503.2724516476128	1004.5303503620256	2	503.2716064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTLSSWNLK_	ENST00000380319.2_1_X:15782817-15782931:+|nuORF;ENST00000380334.6_1_X:15706900-15721312:+|nuORF;ENST00000380336.5_1_X:15706900-15715389:+|nuORF;ENST00000435806.2_1_X:15706900-15713817:+|nuORF;nc|ENSG00000290746|Q8WTZ4|CA5BP1	154.1183686248401	0.005909203230691971	4				NaN	NaN	0	NaN	10438	3730	14169
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14171	36.396	NaN	3909.9	30	0	416.81	0.039	+			10641	EYPDRIMNTF	10	79	651.2953005777623	1300.5760482223245	2	651.2947998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_EYPDRIM(Oxidation (M))NTF_	ENSG00000137267|ENST00000333628|TUBB2A;ENSG00000137285|ENST00000259818|TUBB2B;ENSG00000188229|ENST00000340384|TUBB4B;ENSG00000196230|ENST00000327892|TUBB;ENSG00000258947|ENST00000315491|TUBB3;ENST00000518096.1_1_8:30209523-30210210:+|nuORF;ENST00000604929.1_1_9:140136931-140138005:+|nuORF;nc|ENSG00000258947|Q13509-2|TUBB3;TUBB2B|p.D177Hfs*21|1|0.32|ENSG00000137285|chr6:3225559-3225560|TC/-|frameshift_variant;TUBB2B|p.S168N|1|0.15|ENSG00000137285|chr6:3225586-3225586|C/T|missense_variant	126.24258497203832	0.01851300475414303	4				NaN	NaN	0	NaN	10439	3730	14169
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14186	36.427	NaN	2242.8	30	0	403.29	0.142	+			44995	TVEASDQGR	9	60	481.72888556985265	NaN	0	481.72930908203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVEASDQGR_	CELSR2-KIAA1324|1|fusion;CELSR2|p.G1044Vfs*17|1|0.42|ENSG00000143126|chr1:109253206-109253206|G/-|frameshift_variant;CELSR2|p.P2879Lfs*14|1|0.28|ENSG00000143126|chr1:109273557-109273557|C/-|frameshift_variant;CELSR2|p.V2215Wfs*26|2|0.42|ENSG00000143126|chr1:109269115-109269115|C/-|frameshift_variant;ENSG00000143126|ENST00000271332|CELSR2	25.57405402267927	0.3484490411150625	4				NaN	NaN	0	NaN	10451	3733	14185
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14204	36.465	NaN	5133	30	0	871.25	0.214	+			771	AEEPLVSSIT	10	63	523.2744610926062	1044.5343692520123	2	523.2744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEEPLVSSIT_	ENSG00000119139|ENST00000377245|TJP2;nc|ENSG00000119139|Q9UDY2-2|TJP2;nc|ENSG00000119139|Q9UDY2-3|TJP2;nc|ENSG00000119139|Q9UDY2-4|TJP2;nc|ENSG00000119139|Q9UDY2-5|TJP2;nc|ENSG00000119139|Q9UDY2-6|TJP2;nc|ENSG00000119139|Q9UDY2-7|TJP2	49.44154591367651	0.46214596422418036	4				NaN	NaN	0	NaN	10466	3736	14203
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14205	36.468	NaN	2649	30	0	193.28	0.106	+			1037	AEKLQLQEQL	10	68	600.3345947265625	NaN	0	600.3345947265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEKLQLQEQL_	ENSG00000100345|ENST00000216181|MYH9;nc|ENSG00000100345|P35579-2|MYH9;SYNDIG1-MYH9|1|fusion	55.721020083383095	0.26922100141337213	4				NaN	NaN	0	NaN	10467	3736	14203
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14206	36.47	NaN	3933	30	0	395.22	0.106	+			49745	VYNTATNQW	9	61	548.756502633948	1095.498452334696	2	548.7572021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYNTATNQW_	ENSG00000111727|ENST00000229330|HCFC2;ENSG00000172534|ENST00000310441|HCFC1;HCFC1|p.L913Wfs*11|1|0.39|ENSG00000172534|chrX:153956309-153956309|A/-|frameshift_variant;HCFC1|p.P1894Lfs*22|1|0.06|ENSG00000172534|chrX:153950835-153950835|G/-|frameshift_variant;HCFC1|p.P367Qfs*16|1|0.4|ENSG00000172534|chrX:153960146-153960146|G/-|frameshift_variant;HCFC1|p.P456Rfs*34|1|0.39|ENSG00000172534|chrX:153959879-153959879|G/-|frameshift_variant;HCFC2|p.A339Hfs*2|1|0.43|ENSG00000111727|chr12:104082847-104082847|A/-|frameshift_variant;HCFC2|p.N309Ifs*32|4|0.23|ENSG00000111727|chr12:104082757-104082757|A/-|frameshift_variant;nc|ENSG00000111727|Q9Y5Z7-2|HCFC2;nc|ENSG00000172534|P51610-2|HCFC1;nc|ENSG00000172534|P51610-3|HCFC1;nc|ENSG00000172534|P51610-4|HCFC1	136.26810882979174	0.012230845423532208	4				NaN	NaN	0	NaN	10468	3736	14203
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14207	36.472	NaN	1725.1	30	0	253.82	0.106	+			29941	PMPGVYFFAY	10	54	596.2805786132812	NaN	0	596.2805786132812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PMPGVYFFAY_	ENSG00000186897|ENST00000334221|C1QL4	26.79610172149135	0.4121907004225123	4				NaN	NaN	0	NaN	10469	3736	14203
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14208	36.474	NaN	1297.8	30	0	135.98	0.106				-1	MRALLALCL	9	55	510.29144287109375	NaN	0	510.29144287109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_M(Oxidation (M))RALLALCL_	ENSG00000178343|ENST00000319234|SHISA3;SHISA3|p.G20Afs*96|1|0.09|ENSG00000178343|chr4:42398113-42398113|G/-|frameshift_variant	38.80614096846853	0.28164298475537564	4				NaN	NaN	0	NaN	10470	3736	14203
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14209	36.476	NaN	4118.7	30	0	275.31	0.043				-1	MLPFQTWRLLW	11	88	774.9034423828125	NaN	0	774.9034423828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))M(Oxidation (M))LPFQTWRLLW_	ENST00000554152.5_1_14:53339627-53341999:-|nuORF	12.811709888998246	0.456735970842152	4				NaN	NaN	0	NaN	10471	3736	14203
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14210	36.477	NaN	2992.7	30	0	293.37	0.146			+	-1	LEKKNLHDLMR	11	67	706.8889498099719	NaN	0	706.8898315429688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_LEKKNLHDLM(Oxidation (M))R_	REV__ENSG00000177380|ENST00000334186|PPFIA3;REV__nc|ENSG00000177380|O75145-2|PPFIA3	20.030474535948922	0.456735970842152	4				NaN	NaN	0	NaN	10472	3736	14203
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14237	36.538	NaN	2509	30	0	202.7	0.145	+			19626	KDILLQQQQQL	11	76	677.8899720718101	1353.7653912104201	2	677.88720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KDILLQQQQQL_	ENSG00000168264|ENST00000366609|IRF2BP2;IRF2BP2|p.K554Nfs*26|1|0.21|ENSG00000168264|chr1:234607239-234607239|T/-|frameshift_variant;nc|ENSG00000168264|Q7Z5L9-2|IRF2BP2	43.5013094617712	0.5100344455026135	4				NaN	NaN	0	NaN	10493	3742	14236
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14252	36.571	NaN	5985.9	30	0	928.67	0.142	+			4586	ATLGALLQK	9	66	457.7871298396728	913.5597067461456	2	457.7867126464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATLGALLQK_	ENSG00000144426|ENST00000683969|NBEAL1;NBEAL1|p.A1274Qfs*17|1|0.1|ENSG00000144426|chr2:203135766-203135766|A/-|frameshift_variant;NBEAL1|p.F1670Lfs*25|1|0.21|ENSG00000144426|chr2:203144843-203144843|T/-|frameshift_variant;NBEAL1|p.F2315Lfs*2|1|0.17|ENSG00000144426|chr2:203193900-203193900|T/-|frameshift_variant;NBEAL1|p.K2562Rfs*15|1|0.41|ENSG00000144426|chr2:203209306-203209306|A/-|frameshift_variant;NBEAL1|p.N2072Kfs*10|1|0.35|ENSG00000144426|chr2:203172825-203172826|-/A|frameshift_variant;NBEAL1|p.T1311Nfs*3|1|0.08|ENSG00000144426|chr2:203135875-203135876|-/A|frameshift_variant;nc|ENSG00000144426|Q6ZS30-1|NBEAL1;nc|ENSG00000144426|Q6ZS30|NBEAL1	125.81401957644128	0.01768009863045738	4				NaN	NaN	0	NaN	10505	3745	14251
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14268	36.605	NaN	6772.1	30	0	1700	0.214				-1	 	0	73	516.3018979227361	515.294621456136	1	516.3015747070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10518	3748	14267
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14269	36.609	NaN	4134.4	30	0	327.74	0.106	+			45543	TYKVISNEF	9	72	550.7844984903563	NaN	0	550.7850341796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TYKVISNEF_	ENSG00000114062|ENST00000648336|UBE3A;ENST00000429033.1_1_21:32434669-32435362:-|nuORF;nc|ENSG00000114062|Q05086-2|UBE3A;nc|ENSG00000114062|Q05086|UBE3A	66.96192283764107	0.11962625698446946	4				NaN	NaN	0	NaN	10519	3748	14267
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14270	36.611	NaN	1722.7	30	0	158.88	0.106			+	19537	KCCLISVCR	9	55	569.7807006835938	NaN	0	569.7807006835938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_KC(Carbamidomethyl (C))C(Carbamidomethyl (C))LISVCR_	REV__ENSG00000188610|ENST00000369390|FAM72B;REV__ENSG00000196550|ENST00000367128|FAM72A;REV__ENSG00000215784|ENST00000400889|FAM72D;REV__ENSG00000263513|ENST00000584486|FAM72C;REV__FAM72A|p.F20L|1|0.24|ENSG00000196550|chr1:206201966-206201966|G/T|missense_variant	42.396135135203025	0.2590952873412954	4				NaN	NaN	0	NaN	10520	3748	14267
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14271	36.613	NaN	2428.4	30	0	325.52	0.106	+			51612	YYTNSLEKL	9	61	565.7907969092947	NaN	0	565.791015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YYTNSLEKL_	ENSG00000140836|ENST00000268489|ZFHX3;nc|ENSG00000140836|Q15911-2|ZFHX3;ZFHX3|p.A3407Lfs*78|2|0.3|ENSG00000140836|chr16:72788061-72788061|G/-|frameshift_variant;ZFHX3|p.D1894Qfs*34|1|0.05|ENSG00000140836|chr16:72797002-72797003|CC/-|frameshift_variant;ZFHX3|p.H3611Tfs*83|1|0.4|ENSG00000140836|chr16:72787445-72787445|G/-|frameshift_variant;ZFHX3|p.P2490Sfs*44|1|0.33|ENSG00000140836|chr16:72795215-72795216|-/G|frameshift_variant;ZFHX3|p.R1056Q|1|0.39|ENSG00000140836|chr16:72950518-72950518|C/T|missense_variant;ZFHX3|p.T1213Qfs*31|1|0.24|ENSG00000140836|chr16:72811931-72811931|T/-|frameshift_variant;ZFHX3|p.T3266Rfs*18|1|0.31|ENSG00000140836|chr16:72788481-72788481|G/-|frameshift_variant	40.77816245573522	0.2702456086868081	4				NaN	NaN	0	NaN	10521	3748	14267
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14272	36.614	NaN	2615.1	30	0	409.44	0.034			+	26643	LVDQRLGAP	9	57	484.7798576714562	NaN	0	484.7800598144531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LVDQRLGAP_	REV__ENSG00000100239|ENST00000612753|PPP6R2;REV__nc|ENSG00000100239|O75170-2|PPP6R2;REV__nc|ENSG00000100239|O75170-3|PPP6R2;REV__nc|ENSG00000100239|O75170-4|PPP6R2;REV__nc|ENSG00000100239|O75170-6|PPP6R2;REV__nc|ENSG00000100239|O75170|PPP6R2;REV__PPP6R2|p.E897Rfs*10|1|0.37|ENSG00000100239|chr22:50443948-50443948|C/-|frameshift_variant;REV__PPP6R2|p.H660Mfs*72|2|0.43|ENSG00000100239|chr22:50438607-50438607|C/-|frameshift_variant;REV__PPP6R2|p.K449Sfs*24|1|0.17|ENSG00000100239|chr22:50432274-50432274|A/-|frameshift_variant;REV__PPP6R2|p.P703Lfs*29|2|0.3|ENSG00000100239|chr22:50438737-50438737|G/-|frameshift_variant;REV__PPP6R2|p.P854Rfs*23|1|0.41|ENSG00000100239|chr22:50440981-50440981|C/-|frameshift_variant	35.61828744233558	0.29773779453147337	4				NaN	NaN	0	NaN	10522	3748	14267
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14287	36.646	NaN	6989	30	0	627.86	0.214	+			45815	VAIIARTDL	9	70	486.2980128289812	970.5814727247624	2	486.2975769042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VAIIARTDL_	ENSG00000106348|ENST00000338791|IMPDH1;ENSG00000178035|ENST00000326739|IMPDH2;ENST00000469328.5_1_7:128033063-128040541:-|nuORF;ENST00000484496.5_1_7:128032984-128040541:-|nuORF;IMPDH1|p.A247Gfs*7|1|0.06|ENSG00000106348|chr7:128398490-128398491|-/C|frameshift_variant;nc|ENSG00000106348|P20839-2|IMPDH1;nc|ENSG00000106348|P20839-3|IMPDH1;nc|ENSG00000106348|P20839-4|IMPDH1;nc|ENSG00000106348|P20839-5|IMPDH1;nc|ENSG00000106348|P20839-7|IMPDH1;nc|ENSG00000106348|P20839|IMPDH1	90.60085204095205	0.06317133949006545	4				NaN	NaN	0	NaN	10534	3751	14286
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14288	36.649	NaN	3902	30	0	520.41	0.106			+	3565	ASTSLLRLF	9	77	336.5340908552588	1006.5804431659765	3	336.5343322753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASTSLLRLF_	REV__COL5A1|p.A1736T|1|0.39|ENSG00000130635|chr9:134835040-134835040|G/A|missense_variant	19.359975847455235	0.6112419832031293	4				NaN	NaN	0	NaN	10535	3751	14286
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14289	36.651	NaN	3087	30	0	334.51	0.106			+	37573	SLNFGGNLAEL	11	62	567.7930414172581	1133.5715299013161	2	567.7931518554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLNFGGNLAEL_	REV__ENSG00000107815|ENST00000311916|TWNK;REV__nc|ENSG00000107815|Q96RR1-2|TWNK;REV__nc|ENSG00000107815|Q96RR1-3|TWNK	37.50817390946774	0.5920388381045607	4				NaN	NaN	0	NaN	10536	3751	14286
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14290	36.653	NaN	3361.5	30	0	405.51	0.038			+	43873	TMIWTIVMY	9	67	595.2859588545863	1188.5573647759725	2	595.7872924804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Oxidation (M)	_TM(Oxidation (M))IWTIVM(Oxidation (M))Y_	REV__GPR50|p.L149M|1|0.19|ENSG00000102195|chrX:151180028-151180028|C/A|missense_variant	50.0245360154114	0.3026755932229825	4				NaN	NaN	0	NaN	10537	3751	14286
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14304	36.683	NaN	2242.9	30	0	221.71	0.145			+	34782	RYLDKQELD	9	66	590.3046875	NaN	0	590.3046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RYLDKQELD_	REV__ENSG00000181007|ENST00000392161|ZFP82	37.81151784470057	0.28666463014928195	4				NaN	NaN	0	NaN	10548	3754	14303
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14316	36.71	NaN	7177.4	30	0	1027.7	0.214			+	38400	SRYTSSLSL	9	61	507.26682977963975	1012.5191066260795	2	507.2665100097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SRYTSSLSL_	REV__ENSG00000047597|ENST00000378616|XK	74.25504064058377	0.12238981753128622	4				NaN	NaN	0	NaN	10557	3757	14315
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14317	36.713	NaN	3772.3	30	0	583.58	0.106	+			23214	KYGALVNNF	9	68	513.2765349174599	1024.5385169017197	2	513.2764892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KYGALVNNF_	ENSG00000117481|ENST00000474844|NSUN4;ENST00000475281.1_1_1:46810505-46810817:+|nuORF;ENST00000495427.1_2_1:46810505-46812688:+|nuORF;nc|ENSG00000117481|Q96CB9-2|NSUN4;nc|ENSG00000117481|Q96CB9-4|NSUN4	74.25504064058377	0.12238981753128622	4				NaN	NaN	0	NaN	10558	3757	14315
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14318	36.715	NaN	2976.4	30	0	286.26	0.106	+			1892	AIMDPLPLRTK	11	72	627.8657357894224	1253.7169186456447	2	627.8657836914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AIMDPLPLRTK_	AHR|p.D549Vfs*28|1|0.18|ENSG00000106546|chr7:17339471-17339474|ATTT/-|frameshift_variant;AHR|p.F562Sfs*16|1|0.24|ENSG00000106546|chr7:17339506-17339506|T/-|frameshift_variant;ENSG00000106546|ENST00000242057|AHR	45.764366957710365	0.4790689093891431	4				NaN	NaN	0	NaN	10559	3757	14315
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14319	36.717	NaN	3634.7	30	0	364.57	0.106				-1	 	0	77	532.2965031099704	531.2892266433704	1	532.2962036132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10560	3757	14315
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14320	36.719	NaN	3529.3	30	0	309.57	0.039			+	48848	VVCDTLMGWQK	11	65	640.3122691049803	1278.6099852767604	2	640.31201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVCDTLMGWQK_	REV__ENST00000422644.2_1_X:73693403-73693721:-|nuORF	29.170058357718403	0.683821074385409	4				NaN	NaN	0	NaN	10561	3757	14315
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14333	36.747	NaN	15769	30	0	1172.8	0.213	+			40819	SVEEISTLVQK	11	83	616.840198343818	1231.6658437544359	2	616.8403930664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVEEISTLVQK_	ENSG00000055950|ENST00000318364|MRPL43;nc|ENSG00000055950|Q8N983-2|MRPL43;nc|ENSG00000055950|Q8N983-3|MRPL43;nc|ENSG00000055950|Q8N983-6|MRPL43;nc|ENSG00000055950|Q8N983-7|MRPL43;nc|ENSG00000055950|Q8N983|MRPL43	162.63603312974413	4.7853989453775665E-05	4				NaN	NaN	0	NaN	10571	3760	14332
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14334	36.75	NaN	6597.5	30	0	2320.8	0.037				-1	 	0	81	368.8477150957517	1103.521315887455	3	368.84814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10572	3760	14332
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14346	36.776	NaN	9516.3	30	0	787.89	0.145	+			47475	VQASTYVQRA	10	103	561.7988942142005	1121.5832354952008	2	561.7985229492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VQASTYVQRA_	ENSG00000129038|ENST00000261921|LOXL1;ENST00000566011.5_1_15:74234368-74244175:+|nuORF	69.6276240434122	0.2803623802747859	4				NaN	NaN	0	NaN	10581	3763	14345
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14361	36.809	NaN	3081.9	30	0	315.44	0.144	+			25804	LSAWTNDAMA	10	60	540.2442985967349	1078.4740442602697	2	540.7457885742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSAWTNDAMA_	ENSG00000108846|ENST00000285238|ABCC3;ENST00000502426.5_1_17:48736553-48755440:+|nuORF;nc|ENSG00000108846|O15438-2|ABCC3;nc|ENSG00000108846|O15438-4|ABCC3	37.81151784470057	0.569310847604193	4				NaN	NaN	0	NaN	10593	3766	14360
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14373	36.836	NaN	3383.7	30	0	294.36	0.214	+			13285	GIYAYGFEK	9	66	524.2611594084934	1046.5077658837868	2	524.2615356445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GIYAYGFEK_	EIF4A2|p.Q209Lfs*23|1|0.03|ENSG00000156976|chr3:186786269-186786270|-/ACTGTCATTTCTAGATCTAC|frameshift_variant;ENSG00000141543|ENST00000649764|EIF4A3;ENSG00000156976|ENST00000323963|EIF4A2;ENSG00000161960|ENST00000293831|EIF4A1;ENST00000465032.5_1_3:186501384-186502902:+|nuORF;ENST00000465222.1_1_3:186502277-186502505:+|nuORF;ENST00000465267.5_1_3:186501384-186502902:+|nuORF;ENST00000467585.1_1_3:186502182-186503751:+|nuORF;ENST00000485101.5_1_3:186501384-186502505:+|nuORF;ENST00000486805.5_1_3:186501384-186502505:+|nuORF;ENST00000575957.1_1_17:78115565-78120760:-|nuORF;ENST00000578324.5_1_17:7477602-7481249:+|nuORF;ENST00000580461.5_1_17:7476163-7478717:+|nuORF;ENST00000581621.1_1_17:7476159-7481249:+|nuORF;ENST00000582848.5_1_17:7476159-7480015:+|nuORF;ENST00000584054.5_1_17:7476159-7478064:+|nuORF;ENST00000584712.5_1_17:7476159-7478717:+|nuORF;ENST00000584901.5_1_17:7476159-7480015:+|nuORF;nc|ENSG00000156976|Q14240-2|EIF4A2;nc|ENSG00000161960|P60842-2|EIF4A1	39.252832667884924	0.4290233611298554	4				NaN	NaN	0	NaN	10602	3769	14372
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14374	36.839	NaN	2334.5	30	0	223.2	0.106			+	-1	LLCTNECLA	9	61	547.2530429048304	1092.4915328764607	2	547.2534790039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_LLC(Carbamidomethyl (C))TNEC(Carbamidomethyl (C))LA_	REV__ENSG00000182612|ENST00000611590|TSPAN10;REV__ENST00000571707.1_1_17:79609405-79612656:+|nuORF;REV__nc|ENSG00000182612|Q9H1Z9|TSPAN10	39.252832667884924	0.4290233611298554	4				NaN	NaN	0	NaN	10603	3769	14372
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14375	36.841	NaN	2168.2	30	0	266.12	0.034	+			17343	IAISRTPVL	9	58	485.30839663788083	968.6022403425617	2	485.30859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IAISRTPVL_	ENSG00000165678|ENST00000372134|GHITM	49.536043120802724	0.308405419312776	4				NaN	NaN	0	NaN	10604	3769	14372
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14387	36.867	NaN	18454	30	0	5064.4	0.214	+			34778	RYIPTAAAF	9	65	505.27729441170027	1008.5400358902006	2	505.2768859863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RYIPTAAAF_	ENSG00000058262|ENST00000243253|SEC61A1;ENSG00000065665|ENST00000298428|SEC61A2;ENST00000498837.1_1_3:127786720-127788502:+|nuORF;nc|ENSG00000058262|P61619-3|SEC61A1;nc|ENSG00000065665|Q9H9S3-3|SEC61A2	47.657333605630114	0.33044192980041115	4				NaN	NaN	0	NaN	10613	3772	14386
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14388	36.87	NaN	2959.9	30	0	394.21	0.106	+			3320	ASLVFHSTSM	10	55	540.2640031069444	1078.5134532806887	2	540.2633666992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASLVFHSTSM_	ENSG00000204634|ENST00000409318|TBC1D8;nc|ENSG00000204634|O95759-2|TBC1D8;nc|ENSG00000204634|O95759|TBC1D8	26.69291269510374	0.6618461711292317	4				NaN	NaN	0	NaN	10614	3772	14386
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14389	36.872	NaN	1496	30	0	113.94	0.034			+	2495	APSPPPLGPGA	11	48	480.7615966796875	NaN	0	480.7615966796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_APSPPPLGPGA_	REV__ENST00000351266.8_1_9:34551759-34552056:-|nuORF	26.69291269510374	0.4464570093767436	4				NaN	NaN	0	NaN	10615	3772	14386
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14402	36.899	NaN	8571.2	30	0	467.27	0.214	+			45536	TYITSVSRL	9	73	520.2924565341245	1038.570360135049	2	520.292724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TYITSVSRL_	ENSG00000164823|ENST00000451899|OSGIN2;nc|ENSG00000164823|Q9Y236|OSGIN2	78.26377905018397	0.10505600812668463	4				NaN	NaN	0	NaN	10625	3775	14401
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14403	36.903	NaN	5295.6	30	0	747.13	0.106			+	27333	MIESYINY	8	64	516.7371093878297	1031.4596658424593	2	516.7367553710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MIESYINY_	REV__tr|U7T3W3|U7T3W3_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00283PE=4SV=1	45.9519527083369	0.6193794311207887	4				NaN	NaN	0	NaN	10626	3775	14401
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14404	36.905	NaN	3004.9	30	0	380.17	0.038			+	25729	LRRWTKTNL	9	67	594.3534057299588	1186.6922585267175	2	594.3534545898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LRRWTKTNL_	REV__ENST00000361488.7_1_8:58955845-59058627:+|nuORF	41.42661286455405	0.403525789677298	4				NaN	NaN	0	NaN	10627	3775	14401
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14433	36.969	NaN	3825.2	30	0	729.13	0.144	+			47698	VSERWTLLT	9	67	552.8065933058515	1103.598633678503	2	552.8070068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSERWTLLT_	ENST00000548821.1_1_12:120615393-120615546:-|nuORF	53.08895987439943	0.27122541748218487	4				NaN	NaN	0	NaN	10650	3781	14432
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14444	36.996	NaN	2405	30	0	319.44	0.214	+			4370	ATGTFKAKAL	10	63	336.5340908552588	1006.5804431659765	3	336.53424072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATGTFKAKAL_	ENSG00000179094|ENST00000317276|PER1;nc|ENSG00000179094|O15534-4|PER1;PER1|p.A962Pfs*160|1|0.38|ENSG00000179094|chr17:8143454-8143454|C/-|frameshift_variant	23.04248740728303	0.69165701907106	4				NaN	NaN	0	NaN	10658	3784	14443
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14445	37	NaN	4013.8	30	0	382.18	0.106			+	-1	FCQRTSKLFIL	11	74	706.8899568127446	1411.765360692289	2	706.8875122070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_FC(Carbamidomethyl (C))QRTSKLFIL_	REV__ENST00000496524.5_1_2:110889257-110901337:-|nuORF	23.52269567125451	0.7430573033454468	4				NaN	NaN	0	NaN	10659	3784	14443
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14446	37.001	NaN	2565.2	30	0	294.89	0.106			+	-1	EASTETYVM	9	68	523.7226553213652	1045.4307577095303	2	523.721923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_EASTETYVM(Oxidation (M))_	REV__tr|U7SEM5|U7SEM5_FUSNUCRISPRsystemsingle-strand-specificdeoxyribonucleaseCas10/Csm1(subtypeIII-A)OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02355PE=3SV=1	31.954861631926434	0.5046124803899898	4				NaN	NaN	0	NaN	10660	3784	14443
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14447	37.003	NaN	3242.2	30	0	507.61	0.106			+	20324	KEQQKGKGEH	10	68	584.8055010565412	NaN	0	584.8050537109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEQQKGKGEH_	REV__ENSG00000163694|ENST00000295971|RBM47;REV__ENST00000510871.5_1_4:40427923-40438677:-|nuORF	39.252832667884924	0.37128895876774715	4				NaN	NaN	0	NaN	10661	3784	14443
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14448	37.005	NaN	3266.2	30	0	310.67	0.038			+	-1	LSLIVCTFPGS	11	70	597.3162087567555	1192.6178645803109	2	597.3155517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_LSLIVC(Carbamidomethyl (C))TFPGS_	REV__ENSG00000170927|ENST00000371117|PKHD1;REV__nc|ENSG00000170927|P08F94-2|PKHD1;REV__PKHD1|p.F1531Lfs*61|1|0.39|ENSG00000170927|chr6:52025217-52025217|A/-|frameshift_variant;REV__PKHD1|p.H2893Pfs*2|1|0.4|ENSG00000170927|chr6:51754903-51754904|-/G|frameshift_variant;REV__PKHD1|p.P1545Qfs*47|1|0.37|ENSG00000170927|chr6:52025176-52025176|G/-|frameshift_variant	44.377184641726394	0.49804979881800077	4				NaN	NaN	0	NaN	10662	3784	14443
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14461	37.033	NaN	3774.8	30	0	581.95	0.214	+			1954	AIVAYGLYK	9	64	499.2898272095424	996.5651014858848	2	499.2893371582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AIVAYGLYK_	ENSG00000181061|ENST00000321331|HIGD1A;ENST00000470543.1_1_3:42826765-42845976:-|nuORF;nc|ENSG00000181061|Q9Y241-2|HIGD1A	79.9392285194092	0.09781135437301468	4				NaN	NaN	0	NaN	10672	3787	14460
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14462	37.037	NaN	3192.7	30	0	420.46	0.037			+	10413	EVGMVISAFND	11	65	591.2802124023438	NaN	0	591.2802124023438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EVGMVISAFND_	REV__ATP1A2|p.T757M|1|0.37|ENSG00000018625|chr1:160135588-160135588|C/T|missense_variant	41.42661286455405	0.376895999158515	4				NaN	NaN	0	NaN	10673	3787	14460
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14475	37.064	NaN	3680	30	0	326.35	0.145				-1	MPHEDCITAL	10	64	593.7655390395963	1185.5165251459925	2	593.7658081054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_MPHEDC(Carbamidomethyl (C))ITAL_	ENSG00000115368|ENST00000314761|WDR75;ENST00000436347.5_1_2:190313199-190340140:+|nuORF	34.172542307311794	0.6007644933930345	4				NaN	NaN	0	NaN	10683	3790	14474
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14487	37.091	NaN	6274	30	0	2254.8	0.214			+	-1	SMRLVSHMQ	9	72	368.8477150957517	1103.521315887455	3	368.84808349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_SM(Oxidation (M))RLVSHMQ_	REV__ENST00000582835.1_1_2:95558347-95558446:-|nuORF	24.519189625965996	0.574102787014149	4				NaN	NaN	0	NaN	10692	3793	14486
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14488	37.095	NaN	4086.1	30	0	473.15	0.106	+			51602	YYQHIVTTL	9	65	569.3006061676601	1136.5866594021202	2	569.3012084960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YYQHIVTTL_	ENSG00000116005|ENST00000433351|PCYOX1;nc|ENSG00000116005|Q9UHG3-2|PCYOX1	84.9155231211612	0.07920012719736333	4				NaN	NaN	0	NaN	10693	3793	14486
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14489	37.097	NaN	2849.1	30	0	385.79	0.106				-1	LKTKMSKYSA	10	64	586.8194158289485	1171.624278724697	2	586.818603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_LKTKM(Oxidation (M))SKYSA_	tr|U7T4V6|U7T4V6_FUSNUUPF0735ACTdomain-containingproteinHMPREF1766_00573OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00573PE=3SV=1	49.536043120802724	0.461275219792494	4				NaN	NaN	0	NaN	10694	3793	14486
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14490	37.099	NaN	2514.1	30	0	252.82	0.036			+	1491	AFPSLWLSF	9	59	534.2813866700707	NaN	0	534.2821044921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AFPSLWLSF_	REV__ENST00000533727.5_1_11:46569951-46615452:-|nuORF	47.91560031466742	0.22105767942158736	4				NaN	NaN	0	NaN	10695	3793	14486
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14502	37.125	NaN	2499.6	30	0	682.13	0.214				-1	 	0	69	499.2751287363713	498.2678522697713	1	499.2713317871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10704	3796	14501
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14503	37.128	NaN	2017.8	30	0	257.49	0.034	+			36288	SERDGVLAL	9	54	480.26137009645225	958.5081872597045	2	480.2612609863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SERDGVLAL_	ENSG00000092929|ENST00000207549|UNC13D;ENST00000591563.5_1_17:73828844-73835996:-|nuORF;nc|ENSG00000092929|Q70J99-3|UNC13D	26.69291269510374	0.5537881896960711	4				NaN	NaN	0	NaN	10705	3796	14501
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14521	37.165	NaN	6102.5	30	0	648.45	0.214	+			18437	ISCVNLAFK	9	74	526.2841606792803	1050.5537684253604	2	526.2843017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_ISC(Carbamidomethyl (C))VNLAFK_	ENST00000227758.6_3_11:102219989-102220022:+|nuORF	120.8684288430529	0.02067403653475984	4				NaN	NaN	0	NaN	10720	3799	14520
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14522	37.168	NaN	3559	30	0	1152.5	0.036			+	10198	ETEGPFGVII	10	56	531.2776850852888	1060.5408172373775	2	531.2778930664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ETEGPFGVII_	REV__tr|U7SHD3|U7SHD3_FUSNUtRNA-2-methylthio-N(6)-dimethylallyladenosinesynthaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=miaBPE=3SV=1	34.172542307311794	0.6007644933930345	4				NaN	NaN	0	NaN	10721	3799	14520
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14536	37.197	NaN	2572.7	30	0	227.67	0.214	+			36565	SFRQEKIL	8	57	510.79559658411256	1019.5766402350251	2	510.7955322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SFRQEKIL_	ENSG00000064607|ENST00000452918|SUGP2;ENST00000598240.1_1_19:19105804-19136912:-|nuORF;nc|ENSG00000064607|Q8IX01-3|SUGP2;nc|ENSG00000064607|Q8IX01-4|SUGP2	56.72105179125745	0.5342425954139568	4				NaN	NaN	0	NaN	10732	3802	14535
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14537	37.201	NaN	4335.4	30	0	402.94	0.106			+	9770	ENNEVKKLI	9	71	543.8114229602461	1085.608292987292	2	543.8121337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ENNEVKKLI_	REV__tr|U7T8E8|U7T8E8_FUSNUTIGR00370familyproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00030PE=4SV=1	51.19269402634007	0.2889735674168909	4				NaN	NaN	0	NaN	10733	3802	14535
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14538	37.203	NaN	1520.6	30	0	162.2	0.033	+			6939	CPFLRPGI	8	50	451.75090658450534	NaN	0	451.75042724609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_CPFLRPGI_	ENST00000259089.8_1_8:11421650-11421836:+|nuORF	37.028477286268924	1.7418937515398478	4				NaN	NaN	0	NaN	10734	3802	14535
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14552	37.233	NaN	11560	30	0	2101.6	0.214	+			41593	SVQGIIIYR	9	74	524.8114198589511	1047.6082867847022	2	524.8114624023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVQGIIIYR_	ENSG00000005022|ENST00000317881|SLC25A5;ENSG00000151729|ENST00000281456|SLC25A4;ENSG00000169100|ENST00000381401|SLC25A6;ENST00000406156.2_1_6:121975405-121975696:+|nuORF;ENST00000435239.1_1_7:32511604-32512018:+|nuORF	126.24258497203832	0.01742065577488747	4				NaN	NaN	0	NaN	10745	3805	14551
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14553	37.236	NaN	5338.9	30	0	557.38	0.106	+			20009	KEIGELTQL	9	64	515.7928956539306	NaN	0	515.7931518554688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEIGELTQL_	ENSG00000148484|ENST00000345264|RSU1;ENST00000464074.6_1_10:16769067-16859404:-|nuORF;nc|ENSG00000148484|Q15404-2|RSU1	112.2953585152457	0.007624231467206887	4				NaN	NaN	0	NaN	10746	3805	14551
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14554	37.238	NaN	2395.7	30	0	281.45	0.106	+			14876	GTLPGLRLPS	10	52	337.5390177447019	1009.5952238343057	3	337.5386657714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTLPGLRLPS_	CASZ1|p.Y1191*|1|0.04|ENSG00000130940|chr1:10646251-10646251|G/-|frameshift_variant;ENSG00000130940|ENST00000377022|CASZ1;ENST00000492173.1_1_1:10718563-10720675:-|nuORF;ENST00000496432.6_1_1:10713095-10754402:-|nuORF;nc|ENSG00000130940|Q86V15-2|CASZ1	16.473147378115264	0.7327422906225664	4				NaN	NaN	0	NaN	10747	3805	14551
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14555	37.24	NaN	2630.3	30	0	342.72	0.106			+	11696	FRPVIRGGT	9	59	501.7947692871094	NaN	0	501.7947692871094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FRPVIRGGT_	REV__CCT5|p.A336T|2|0.25|ENSG00000150753|chr5:10261572-10261572|G/A|missense_variant;REV__ENSG00000150753|ENST00000280326|CCT5;REV__ENST00000423695.6_1_5:10250480-10261980:+|nuORF;REV__nc|ENSG00000150753|P48643-2|CCT5	19.996771675451527	0.3693019437812985	4				NaN	NaN	0	NaN	10748	3805	14551
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14556	37.242	NaN	2366	30	0	275.78	0.034	+			21226	KLHPHSTI	8	49	466.7690940112128	931.5236350892256	2	466.76849365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KLHPHSTI_	WDR7|p.P1192H|1|0.26|ENSG00000091157|chr18:56923970-56923970|C/A|missense_variant	38.80614096846853	0.6637206697844082	4				NaN	NaN	0	NaN	10749	3805	14551
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14569	37.268	NaN	6770.4	30	0	859.01	0.214	+			11845	FTAIREASL	9	65	504.2796951292825	1006.544837325365	2	504.2797546386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FTAIREASL_	CDK14|p.E269Sfs*2|1|0.3|ENSG00000058091|chr7:90917699-90917699|G/-|frameshift_variant;CDK14|p.L228Cfs*6|1|0.16|ENSG00000058091|chr7:90899327-90899327|G/-|frameshift_variant;CDK15|p.C410Wfs*2|1|0.09|ENSG00000138395|chr2:201890832-201890833|-/G|frameshift_variant;ENSG00000058091|ENST00000380050|CDK14;ENSG00000138395|ENST00000652192|CDK15;ENST00000451080.5_1_2:202672326-202741280:+|nuORF;ENST00000488419.1_1_2:202671387-202725552:+|nuORF;nc|ENSG00000058091|O94921-2|CDK14;nc|ENSG00000058091|O94921-3|CDK14;nc|ENSG00000138395|Q96Q40-3|CDK15;nc|ENSG00000138395|Q96Q40-4|CDK15;nc|ENSG00000138395|Q96Q40-5|CDK15;nc|ENSG00000138395|Q96Q40-6|CDK15	60.11826168202944	0.21262886028301267	4				NaN	NaN	0	NaN	10759	3808	14568
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14570	37.271	NaN	3703.1	30	0	620.84	0.106				-1	FPMMVLALVF	10	59	592.3177459069204	NaN	0	592.2910766601562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_FPM(Oxidation (M))MVLALVF_	ENSG00000033867|ENST00000454389|SLC4A7;ENSG00000050438|ENST00000453097|SLC4A8;ENSG00000144290|ENST00000446997|SLC4A10;ENST00000319957.10_1_12:51818771-51890959:+|nuORF;ENST00000446228.5_1_2:162758621-162834241:+|nuORF;ENST00000465487.5_1_3:27418257-27433320:-|nuORF;ENST00000546872.1_1_12:51888707-51890959:+|nuORF;nc|ENSG00000033867|Q9Y6M7-12|SLC4A7;nc|ENSG00000033867|Q9Y6M7-13|SLC4A7;nc|ENSG00000033867|Q9Y6M7-2|SLC4A7;nc|ENSG00000033867|Q9Y6M7-3|SLC4A7;nc|ENSG00000033867|Q9Y6M7-4|SLC4A7;nc|ENSG00000033867|Q9Y6M7-5|SLC4A7;nc|ENSG00000033867|Q9Y6M7-6|SLC4A7;nc|ENSG00000033867|Q9Y6M7-8|SLC4A7;nc|ENSG00000033867|Q9Y6M7-9|SLC4A7;nc|ENSG00000033867|Q9Y6M7|SLC4A7;nc|ENSG00000050438|Q2Y0W8-2|SLC4A8;nc|ENSG00000050438|Q2Y0W8-3|SLC4A8;nc|ENSG00000050438|Q2Y0W8-4|SLC4A8;nc|ENSG00000050438|Q2Y0W8-5|SLC4A8;nc|ENSG00000144290|Q6U841-2|SLC4A10;nc|ENSG00000144290|Q6U841-3|SLC4A10;SLC4A7|p.S1176Kfs*13|1|0.68|ENSG00000033867|chr3:27383191-27383192|-/C|frameshift_variant	26.79610172149135	0.4121907004225123	4				NaN	NaN	0	NaN	10760	3808	14568
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14571	37.273	NaN	2927.4	30	0	285.78	0.037	+			35924	SEFYKHIVL	9	66	568.3112736191092	1134.6079943050183	2	568.311279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEFYKHIVL_	ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2	47.657333605630114	0.33044192980041115	4				NaN	NaN	0	NaN	10761	3808	14568
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14584	37.301	NaN	1831.3	30	0	215.63	0.214			+	9303	EHWIIVVCD	9	54	557.2737948343824	NaN	0	557.272705078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EHWIIVVCD_	REV__ENSG00000038427|ENST00000265077|VCAN;REV__ENST00000505615.1_1_5:82849283-82876028:+|nuORF;REV__ENST00000513016.5_1_5:82832752-82876250:+|nuORF;REV__nc|ENSG00000038427|P13611-2|VCAN;REV__nc|ENSG00000038427|P13611-3|VCAN;REV__nc|ENSG00000038427|P13611-4|VCAN;REV__nc|ENSG00000038427|P13611-5|VCAN	37.15910966729921	0.2899585034171616	4				NaN	NaN	0	NaN	10771	3811	14583
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14585	37.305	NaN	2112.6	30	0	136.31	0.106	+			1156	AEMYVAKF	8	60	479.7383307157721	NaN	0	479.738525390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEMYVAKF_	EEF2|p.E241Rfs*13|1|0.26|ENSG00000167658|chr19:3982316-3982316|C/-|frameshift_variant;ENSG00000167658|ENST00000309311|EEF2	51.33545320467046	1.7418937515398478	4				NaN	NaN	0	NaN	10772	3811	14583
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14586	37.307	NaN	3287.5	30	0	424.26	0.036	+			33274	RGHPPGAQPR	10	61	536.7903175252117	1071.5660821172232	2	536.7910766601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RGHPPGAQPR_	nc|ENSG00000130182|Q96SZ4-3|ZSCAN10	32.81241826257853	0.6118718159329168	4				NaN	NaN	0	NaN	10773	3811	14583
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14598	37.333	NaN	2938.8	30	0	388.02	0.214			+	38043	SPQLLLHSL	9	65	336.5340908552588	1006.5804431659765	3	336.5343322753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SPQLLLHSL_	REV__ENST00000543571.5_1_6:150004846-150004945:-|nuORF	20.94693142431847	0.6074874384046576	4				NaN	NaN	0	NaN	10782	3814	14597
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14599	37.336	NaN	3964.3	30	0	999.59	0.106				-1	 	0	59	465.7113988327348	929.4082447322696	2	465.711181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10783	3814	14597
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14600	37.338	NaN	3301	30	0	701.56	0.036			+	44177	TQTPVQPVVL	10	63	541.3163096740553	1080.6180664149106	2	541.3165283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TQTPVQPVVL_	REV__ENST00000461035.5_1_1:45478567-45479041:+|nuORF	40.05817265558897	0.5486090488315611	4				NaN	NaN	0	NaN	10784	3814	14597
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14611	37.364	NaN	4981.2	30	0	424.78	0.146			+	47158	VLSFPNKKFFW	11	76	706.8899787323935	NaN	0	706.8904418945312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VLSFPNKKFFW_	REV__ENST00000504733.1_1_3:130546621-130547209:+|nuORF	17.468008924990375	0.456735970842152	4				NaN	NaN	0	NaN	10792	3817	14610
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14637	37.424	NaN	3718.1	30	0	456.6	0.214	+			33199	REYQELMNV	9	63	591.2849450847255	NaN	0	591.2844848632812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_REYQELMNV_	CON__H-INV:HIT000292931;CON__P05787;CON__Q8BGZ7;CON__Q9H552;ENSG00000170421|ENST00000692008|KRT8;ENST00000409686.2_1_9:102067468-102068890:+|nuORF;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;ENST00000547031.5_1_12:53292389-53294972:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	45.97224482568171	0.23445038899310136	4				NaN	NaN	0	NaN	10812	3823	14636
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14638	37.428	NaN	2773.2	30	0	242.6	0.106	+			1043	AEKNFLTTV	9	69	511.77970426906586	1021.5448556049317	2	511.77911376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEKNFLTTV_	ENSG00000196199|ENST00000361479|MPHOSPH8;nc|ENSG00000196199|Q99549-2|MPHOSPH8	96.0336014099291	0.047854655524928534	4				NaN	NaN	0	NaN	10813	3823	14636
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14639	37.43	NaN	1968	30	0	154.37	0.106	+			46250	VEERNLLSV	9	54	529.7957562310304	1057.5769595288607	2	529.7958374023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VEERNLLSV_	ENSG00000108953|ENST00000264335|YWHAE;ENST00000486241.1_1_17:1265194-1303470:-|nuORF;ENST00000489287.1_1_17:1268113-1303470:-|nuORF;nc|ENSG00000108953|P62258-2|YWHAE	25.57405402267927	0.5642445186134241	4				NaN	NaN	0	NaN	10814	3823	14636
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14640	37.431	NaN	2668.7	30	0	348.41	0.036	+			9892	EQLLQNLLK	9	59	549.8299031609176	1097.6452533886352	2	549.830322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EQLLQNLLK_	ENSG00000164190|ENST00000282516|NIPBL;nc|ENSG00000164190|Q6KC79-2|NIPBL;NIPBL|p.I2776Lfs*3|1|0.17|ENSG00000164190|chr5:37064797-37064797|A/-|frameshift_variant;NIPBL|p.L2220Ffs*3|1|0.21|ENSG00000164190|chr5:37048567-37048568|-/T|frameshift_variant	39.252832667884924	0.4290233611298554	4				NaN	NaN	0	NaN	10815	3823	14636
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14655	37.463	NaN	5442.8	30	0	1820.1	0.214				-1	 	0	66	368.8477150957517	1103.521315887455	3	368.84814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10827	3826	14654
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14656	37.466	NaN	3617.1	30	0	577.83	0.106			+	11196	FHKIIWML	8	72	544.3111658385372	1086.6077787438744	2	544.3112182617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FHKIIWML_	REV__ENST00000518667.1_1_8:66643803-66660021:-|nuORF	35.61828744233558	0.6843154725607303	4				NaN	NaN	0	NaN	10828	3826	14654
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14657	37.468	NaN	2033.1	30	0	223.53	0.033	+			23784	LCLLWAAL	8	52	451.76330178226704	901.5120506313341	2	451.7632751464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LCLLWAAL_	ENSG00000173264|ENST00000438980|GPR137;ENSG00000180998|ENST00000321662|GPR137C;ENST00000536017.1_1_11:64053906-64055433:+|nuORF;GPR137|p.Q245Rfs*21|1|0.42|ENSG00000173264|chr11:64288159-64288159|C/-|frameshift_variant;GPR137|p.R73C|1|0.31|ENSG00000173264|chr11:64286741-64286741|C/T|missense_variant;nc|ENSG00000173264|Q96N19-3|GPR137;nc|ENSG00000173264|Q96N19-4|GPR137;nc|ENSG00000173264|Q96N19-5|GPR137;nc|ENSG00000173264|Q96N19|GPR137	43.626045697637714	0.6338121648150432	4				NaN	NaN	0	NaN	10829	3826	14654
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14671	37.497	NaN	2917.2	30	0	591.01	0.214	+			8824	EELLFSHKL	9	63	558.3092171558283	1114.6038813784564	2	558.3092041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EELLFSHKL_	ENSG00000099290|ENST00000282633|WASHC2A;ENSG00000172661|ENST00000623400|WASHC2C;ENST00000374359.1_1_10:46274511-46281094:+|nuORF;nc|ENSG00000099290|Q641Q2-2|WASHC2A;nc|ENSG00000172661|Q9Y4E1-1|WASHC2C;nc|ENSG00000172661|Q9Y4E1-2|WASHC2C;nc|ENSG00000172661|Q9Y4E1-3|WASHC2C;nc|ENSG00000172661|Q9Y4E1-4|WASHC2C;nc|ENSG00000172661|Q9Y4E1-5|WASHC2C;nc|ENSG00000172661|Q9Y4E1-6|WASHC2C	56.72105179125745	0.24094814563026265	4				NaN	NaN	0	NaN	10840	3829	14670
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14672	37.5	NaN	5287.7	30	0	474.15	0.036	+			46529	VEYQMKSVL	9	64	548.7894589434338	1095.5643649536676	2	548.7894897460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VEYQMKSVL_	ENSG00000159140|ENST00000356577|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-4|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-6|SON;nc|ENSG00000159140|P18583-7|SON;nc|ENSG00000159140|P18583-8|SON;nc|ENSG00000159140|P18583-9|SON	82.7504851949679	0.08565546331141553	4				NaN	NaN	0	NaN	10841	3829	14670
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14687	37.531	NaN	3895.8	30	0	839.97	0.214			+	9817	EPGFNSNN	8	54	439.6845372956779	NaN	0	439.6843566894531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EPGFNSNN_	REV__ENSG00000024526|ENST00000456315|DEPDC1;REV__nc|ENSG00000024526|Q5TB30-2|DEPDC1	25.450171626174864	1.7418937515398478	4				NaN	NaN	0	NaN	10853	3832	14686
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14688	37.535	NaN	3398.4	30	0	285.36	0.106	+			49271	VVQDGITLITK	11	67	593.8560680623993	1185.6975831915986	2	593.8560180664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVQDGITLITK_	ENSG00000079246|ENST00000392132|XRCC5	54.343338949951054	0.37394860514808087	4				NaN	NaN	0	NaN	10854	3832	14686
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14689	37.537	NaN	1684.8	30	0	292.56	0.106			+	-1	TICRCQCL	8	50	527.2338256835938	NaN	0	527.2338256835938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_TIC(Carbamidomethyl (C))RC(Carbamidomethyl (C))QCL_	REV__ENST00000540643.5_2_22:32002357-32009472:+|nuORF	26.79610172149135	1.7418937515398478	4				NaN	NaN	0	NaN	10855	3832	14686
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14690	37.539	NaN	2071.5	30	0	280.99	0.034	+			17269	IAAFLGFW	8	50	462.75258729776294	923.4906216623259	2	462.7521667480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IAAFLGFW_	sp|Q6RJQ3|UL141_HCMVMProteinUL141OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL141PE=1SV=2	54.89457262308372	0.5523244765420926	4				NaN	NaN	0	NaN	10856	3832	14686
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14702	37.564	NaN	16988	30	0	2990	0.214				-1	 	0	82	422.76025673760694	843.5059605420139	2	422.7603759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10865	3835	14701
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14703	37.568	NaN	1981.9	30	0	336.52	0.106			+	30082	PQPWPVCF	8	37	487.2341878634002	NaN	0	487.2342529296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PQPWPVCF_	REV__ENST00000561457.2_1_9:139007800-139008082:-|nuORF	23.036711822280957	1.7418937515398478	4				NaN	NaN	0	NaN	10866	3835	14701
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14704	37.57	NaN	5033	30	0	336.09	0.044			+	-1	HYRHRMWVKYK	11	93	810.4213256835938	NaN	0	810.4213256835938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_HYRHRM(Oxidation (M))WVKYK_	REV__ENSG00000184967|ENST00000330579|NOC4L;REV__NOC4L|p.A205Pfs*13|2|0.34|ENSG00000184967|chr12:132147883-132147883|C/-|frameshift_variant;REV__NOC4L|p.A205Rfs*74|1|0.45|ENSG00000184967|chr12:132147882-132147883|-/C|frameshift_variant;REV__NOC4L|p.P381Lfs*103|1|0.35|ENSG00000184967|chr12:132151548-132151548|C/-|frameshift_variant	9.705651100619752	0.456735970842152	4				NaN	NaN	0	NaN	10867	3835	14701
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14715	37.596	NaN	3282.2	30	0	697.5	0.214			+	28702	NNESASAVM	9	51	461.69989729087575	921.3852416485515	2	461.6997375488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NNESASAVM_	REV__ENSG00000080031|ENST00000376350|PTPRH;REV__nc|ENSG00000080031|Q9HD43-2|PTPRH;REV__nc|ENSG00000080031|Q9HD43-3|PTPRH;REV__PTPRH|p.A846T|1|0.17|ENSG00000080031|chr19:55187543-55187543|C/T|missense_variant	27.882242232435846	0.5426732730940306	4				NaN	NaN	0	NaN	10875	3838	14714
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14716	37.6	NaN	3985.5	30	0	394.23	0.036				-1	IGNMLISSTL	10	62	532.7871954369695	1063.5598379407388	2	532.7870483398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_IGNM(Oxidation (M))LISSTL_	ENST00000510805.1_1_4:144481103-144481289:+|nuORF	37.81151784470057	0.569310847604193	4				NaN	NaN	0	NaN	10876	3838	14714
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14728	37.625	NaN	6687.3	30	0	1127.4	0.214			+	32888	RDLKEFSL	8	72	504.2796951292825	1006.544837325365	2	504.2794189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RDLKEFSL_	REV__ENSG00000205659|ENST00000555028|LIN52;REV__ENST00000553404.5_1_14:74552288-74665677:+|nuORF;REV__nc|ENSG00000205659|Q52LA3|LIN52	63.30626980617807	0.4690498839812213	4				NaN	NaN	0	NaN	10885	3841	14727
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14729	37.629	NaN	6326.3	30	0	1086.7	0.106	+			10362	ETWALQVKL	9	74	363.2095479434016	1086.606814430405	3	363.2098083496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ETWALQVKL_	ENST00000052569.10_2_6:117884475-117884517:-|nuORF	37.15910966729921	0.4535818937225704	4				NaN	NaN	0	NaN	10886	3841	14727
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14730	37.631	NaN	4149.4	30	0	529.22	0.106			+	-1	FSADLFPFCQ	10	53	608.7714422039044	NaN	0	608.7721557617188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))FSADLFPFCQ_	REV__ENST00000545986.1_1_11:61581778-61581910:-|nuORF	26.69291269510374	0.4125295221340092	4				NaN	NaN	0	NaN	10887	3841	14727
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14731	37.632	NaN	3401.5	30	0	357.15	0.038			+	28018	MWVGIEEICI	10	60	596.7915570184183	1191.5685611036365	2	597.2940063476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MWVGIEEICI_	REV__ENSG00000118007|ENST00000383202|STAG1;REV__nc|ENSG00000118007|Q8WVM7-2|STAG1;REV__NCK1-STAG1|1|fusion;REV__NCK1-STAG1|2|fusion;REV__STAG1|p.K1087Nfs*3|1|0.3|ENSG00000118007|chr3:136349168-136349168|T/-|frameshift_variant	38.80614096846853	0.5601458937078225	4				NaN	NaN	0	NaN	10888	3841	14727
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14741	37.656	NaN	4044.5	30	0	580.45	0.215				-1	 	0	67	341.6767347344947	NaN	0	341.6767578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10895	3844	14740
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14742	37.659	NaN	2985.4	30	0	230.36	0.106	+			41310	SVLNLVIVKK	10	70	556.8745887769818	1111.7346246207635	2	556.87451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVLNLVIVKK_	ENSG00000137154|ENST00000380394|RPS6;ENST00000464444.1_1_19:13005132-13005321:+|nuORF	74.1650062923329	0.2432923583094885	4				NaN	NaN	0	NaN	10896	3844	14740
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14743	37.661	NaN	1884.1	30	0	154.81	0.106	+			16104	HDILHSQGY	9	51	535.2575204254513	1068.5004879177025	2	535.25927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HDILHSQGY_	ENST00000507421.1_1_5:75003529-75003685:-|nuORF	41.42661286455405	0.403525789677298	4				NaN	NaN	0	NaN	10897	3844	14740
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14744	37.663	NaN	2252	30	0	259.52	0.039				-1	KKRAADSLDTC	11	59	632.8195190429688	NaN	0	632.8195190429688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_KKRAADSLDTC(Carbamidomethyl (C))_	ENSG00000196700|ENST00000369888|ZNF512B	29.170058357718403	0.43541742044178583	4				NaN	NaN	0	NaN	10898	3844	14740
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14756	37.689	NaN	2932.4	30	0	367.35	0.215				-1	 	0	67	523.2746959773103	522.2674195107103	1	523.2740478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10907	3847	14755
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14757	37.693	NaN	1782.5	30	0	253.19	0.106				-1	 	0	43	492.01308259871956	3437.040642924837	7	492.2995910644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	10908	3847	14755
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14758	37.695	NaN	2560	30	0	342.39	0.106			+	26492	LTLVADSHLI	10	64	541.3163096740553	1080.6180664149106	2	541.316650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LTLVADSHLI_	REV__ENSG00000187908|ENST00000338354|DMBT1;REV__nc|ENSG00000187908|Q9UGM3-2|DMBT1;REV__nc|ENSG00000187908|Q9UGM3-3|DMBT1;REV__nc|ENSG00000187908|Q9UGM3-4|DMBT1;REV__nc|ENSG00000187908|Q9UGM3-5|DMBT1;REV__nc|ENSG00000187908|Q9UGM3-7|DMBT1;REV__nc|ENSG00000187908|Q9UGM3-8|DMBT1;REV__nc|ENSG00000187908|Q9UGM3-9|DMBT1;REV__nc|ENSG00000187908|Q9UGM3|DMBT1	27.882242232435846	0.6521336255503853	4				NaN	NaN	0	NaN	10909	3847	14755
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14759	37.697	NaN	4720.6	30	0	1240.7	0.106			+	11557	FPKQSSNQNN	10	68	582.2779759791075	1162.541399025015	2	582.778076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FPKQSSNQNN_	REV__ENSG00000143971|ENST00000272342|ETAA1	36.446750945000026	0.5818864909973037	4				NaN	NaN	0	NaN	10910	3847	14755
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14760	37.698	NaN	3968.2	30	0	447.5	0.036			+	-1	HISLPGCEF	9	65	530.2503034730328	1058.4860540128655	2	530.2503662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_HISLPGC(Carbamidomethyl (C))EF_	REV__ENST00000539644.5_1_12:124497619-124497844:+|nuORF	38.80614096846853	0.43426287593479557	4				NaN	NaN	0	NaN	10911	3847	14755
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14771	37.724	NaN	6351.5	30	0	1877	0.144	+			45427	TVYDRTTVL	9	64	534.2903651184298	1066.5661773036595	2	534.2901611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVYDRTTVL_	ENSG00000188786|ENST00000373036|MTF1;MTF1|p.F290Yfs*7|1|0.07|ENSG00000188786|chr1:37835200-37835201|-/GGTGTGT|frameshift_variant;MTF1|p.P462Lfs*83|1|0.39|ENSG00000188786|chr1:37822503-37822503|G/-|frameshift_variant;MTF1|p.T228Rfs*19|1|0.17|ENSG00000188786|chr1:37838722-37838722|T/-|frameshift_variant	82.24051045832904	0.08786059719216216	4				NaN	NaN	0	NaN	10919	3850	14770
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14782	37.751	NaN	3115.8	30	0	475.52	0.143			+	47168	VLSSRIGLY	9	62	336.5342218817641	NaN	0	336.5342712402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VLSSRIGLY_	REV__ENSG00000015520|ENST00000381160|NPC1L1;REV__nc|ENSG00000015520|Q9UHC9-2|NPC1L1;REV__nc|ENSG00000015520|Q9UHC9-3|NPC1L1;REV__nc|ENSG00000015520|Q9UHC9-4|NPC1L1;REV__nc|ENSG00000015520|Q9UHC9|NPC1L1	26.79610172149135	0.34227917631780574	4				NaN	NaN	0	NaN	10927	3853	14781
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14796	37.782	NaN	2624.2	30	0	284.64	0.214	+			6532	AYFKQSSVF	9	58	538.7738441419435	1075.533135350687	2	538.7738037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AYFKQSSVF_	ENSG00000168769|ENST00000380013|TET2;nc|ENSG00000168769|Q6N021-2|TET2;nc|ENSG00000168769|Q6N021-3|TET2;TET2|p.M695Tfs*4|1|0.41|ENSG00000168769|chr4:105236026-105236029|TGTC/-|frameshift_variant;TET2|p.V1949Sfs*7|1|0.31|ENSG00000168769|chr4:105276348-105276349|-/A|frameshift_variant	64.20726635412375	0.17854274437659667	4				NaN	NaN	0	NaN	10938	3856	14795
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14797	37.786	NaN	2754.9	30	0	362.17	0.106	+			11362	FLHCSIYFV	9	55	564.7823027784129	1127.5500526236258	2	564.7826538085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FLHCSIYFV_	tr|U7SSV8|U7SSV8_FUSNUDUF3307domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01391PE=4SV=1	33.51558372728122	0.4900267029546261	4				NaN	NaN	0	NaN	10939	3856	14795
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14798	37.788	NaN	1781.1	30	0	215.07	0.034	+			9420	EKILNCVL	8	49	466.2670593261719	NaN	0	466.2670593261719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EKILNCVL_	ENST00000509089.1_1_4:62453105-62542754:+|nuORF	29.14955571784316	1.7418937515398478	4				NaN	NaN	0	NaN	10940	3856	14795
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14811	37.815	NaN	7928.5	30	0	802.45	0.214	+			49955	VYVVGTAHF	9	80	496.76339082622775	NaN	0	496.7633972167969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYVVGTAHF_	ENSG00000170638|ENST00000380909|TRABD;ENST00000463233.1_1_22:50624392-50636456:+|nuORF;nc|ENSG00000170638|Q9H4I3-2|TRABD	82.30502934623384	0.06348534290027165	4				NaN	NaN	0	NaN	10950	3859	14810
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14812	37.819	NaN	5432.5	30	0	645.47	0.106	+			11241	FIISRTQAL	9	70	524.8113082970093	1047.6080636608185	2	524.8114013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FIISRTQAL_	ENSG00000083312|ENST00000337273|TNPO1;nc|ENSG00000083312|Q92973-2|TNPO1;nc|ENSG00000083312|Q92973-3|TNPO1;TNPO1|p.C844Vfs*45|4|0.31|ENSG00000083312|chr5:72903718-72903718|T/-|frameshift_variant	58.22992032128504	0.22837015374068087	4				NaN	NaN	0	NaN	10951	3859	14810
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14813	37.821	NaN	6413.7	30	0	1936.7	0.106	+			30193	PSNATSPRSST	11	86	368.8477150957517	1103.521315887455	3	368.8479919433594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PSNATSPRSST_	BCL9|p.A150S|1|0.15|ENSG00000116128|chr1:147614504-147614504|G/T|missense_variant	27.047317107675042	0.7060868989289394	4				NaN	NaN	0	NaN	10952	3859	14810
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14814	37.823	NaN	5677.8	30	0	533.81	0.036	+			25401	LPKNDLITY	9	68	538.8032386466041	1075.591924360008	2	538.8034057617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LPKNDLITY_	ENSG00000092148|ENST00000399332|HECTD1;HECTD1|p.F2271Lfs*13|1|0.16|ENSG00000092148|chr14:31107059-31107059|A/-|frameshift_variant;HECTD1|p.I2041Lfs*27|1|0.36|ENSG00000092148|chr14:31113133-31113133|T/-|frameshift_variant	54.776311868738084	0.25715957988447635	4				NaN	NaN	0	NaN	10953	3859	14810
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14828	37.852	NaN	2080.5	30	0	485.71	0.142			+	34934	SAAIKELLA	9	52	458.2786865234375	NaN	0	458.2786865234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAAIKELLA_	REV__ENSG00000116721|ENST00000332296|PRAMEF1;REV__ENSG00000120952|ENST00000240189|PRAMEF2;REV__ENSG00000204481|ENST00000334600|PRAMEF14;REV__ENSG00000279169|ENST00000625019|PRAMEF13	20.94693142431847	0.3660861156085067	4				NaN	NaN	0	NaN	10964	3862	14827
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14886	37.989	NaN	102760	30	0	17746	0.128	+			12145	GAIIHTVAL	9	85	447.77421751418433	893.5338820951687	2	447.7742919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GAIIHTVAL_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	114.5858319719848	0.024477364776774663	4				NaN	NaN	0	NaN	11007	3877	14885
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14925	38.079	NaN	15026	30	0	2001	0.214	+			51442	YVDPVNKVL	9	82	523.7978423723958	1045.5811318115916	2	523.7974243164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YVDPVNKVL_	ENSG00000140992|ENST00000342085|PDPK1;nc|ENSG00000140992|O15530-2|PDPK1;nc|ENSG00000140992|O15530-3|PDPK1;nc|ENSG00000140992|O15530-4|PDPK1	62.107414245175825	0.1960472003779324	4				NaN	NaN	0	NaN	11037	3886	14924
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14926	38.083	NaN	15904	30	0	1484.2	0.036	+			170	AAIVAYGLYK	10	80	534.8081389466583	1067.6017249601166	2	534.8079833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAIVAYGLYK_	ENSG00000181061|ENST00000321331|HIGD1A;ENST00000470543.1_1_3:42826765-42845976:-|nuORF;nc|ENSG00000181061|Q9Y241-2|HIGD1A	90.77665401227738	0.12662738171778068	4				NaN	NaN	0	NaN	11038	3886	14924
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14977	38.199	NaN	4505.5	30	0	1033.1	0.214			+	-1	SFFLLTTEM	9	72	368.8481015306626	NaN	0	368.8480529785156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_SFFLLTTEM(Oxidation (M))_	REV__ENSG00000150681|ENST00000367460|RGS18;REV__ENST00000481707.5_1_1:192127767-192130605:+|nuORF;REV__RGS18|p.H26Lfs*22|1|0.04|ENSG00000150681|chr1:192158709-192158710|-/ATACTATTCCATACAT|frameshift_variant	34.172542307311794	0.30503706118289736	4				NaN	NaN	0	NaN	11077	3898	14976
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14978	38.203	NaN	3167.8	30	0	408.86	0.035	+			13173	GHQLLQRR	8	67	336.5340265806879	1006.5802503422638	3	336.53369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GHQLLQRR_	ENST00000603731.1_2_7:35734046-35735162:-|nuORF	19.359975847455235	0.7988239741663654	4				NaN	NaN	0	NaN	11078	3898	14976
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	14990	38.228	NaN	3990.2	30	0	338.58	0.143			+	36552	SFNDPLLIK	9	84	523.7978423723958	1045.5811318115916	2	523.79736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SFNDPLLIK_	REV__ENSG00000168676|ENST00000304372|KCTD19;REV__ENST00000570049.5_1_16:67335149-67360610:-|nuORF;REV__KCTD19|p.V768Rfs*12|1|0.33|ENSG00000168676|chr16:67291754-67291755|-/G|frameshift_variant;REV__KCTD19|p.V768Wfs*38|2|0.36|ENSG00000168676|chr16:67291755-67291755|G/-|frameshift_variant	37.81151784470057	0.4459294069877048	4				NaN	NaN	0	NaN	11087	3901	14989
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15000	38.253	NaN	1895.4	30	0	139.14	0.214	+			37266	SLAEILLKK	9	67	507.832275390625	NaN	0	507.832275390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLAEILLKK_	ENSG00000133704|ENST00000256079|IPO8;ENSG00000205339|ENST00000379719|IPO7;IPO7|p.M511Cfs*3|1|0.19|ENSG00000205339|chr11:9429134-9429134|A/-|frameshift_variant;nc|ENSG00000133704|O15397-2|IPO8	58.78195531508484	0.1545138866451181	4				NaN	NaN	0	NaN	11094	3904	14999
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15001	38.256	NaN	4068.5	30	0	907.54	0.106	+			8107	DYKESFNTI	9	62	558.764178327005	1115.5138037208098	2	558.7647705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DYKESFNTI_	ENSG00000083307|ENST00000646743|GRHL2;ENSG00000134317|ENST00000324907|GRHL1;nc|ENSG00000083307|Q6ISB3-2|GRHL2;nc|ENSG00000134317|Q9NZI5-2|GRHL1;nc|ENSG00000134317|Q9NZI5-3|GRHL1	126.24258497203832	0.01742065577488747	4				NaN	NaN	0	NaN	11095	3904	14999
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15002	38.258	NaN	2749.4	30	0	294.26	0.036	+			39317	STATIFSLQQ	10	72	548.2872393672645	NaN	0	548.2882080078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STATIFSLQQ_	tr|U7T2Z3|U7T2Z3_FUSNUHTHdeoR-typedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00513PE=4SV=1	56.43379154798735	0.2634004003759929	4				NaN	NaN	0	NaN	11096	3904	14999
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15013	38.281	NaN	6125.5	30	0	2460.7	0.141			+	28235	NCQRGSVH	8	57	450.7087605303252	899.4029681274504	2	450.70697021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NCQRGSVH_	REV__ENSG00000042781|ENST00000307340|USH2A;REV__nc|ENSG00000042781|O75445-2|USH2A;REV__nc|ENSG00000042781|O75445-3|USH2A;REV__USH2A|p.E5096Gfs*82|1|0.44|ENSG00000042781|chr1:215634469-215634470|-/C|frameshift_variant;REV__USH2A|p.F1618Lfs*17|1|0.36|ENSG00000042781|chr1:216089044-216089044|A/-|frameshift_variant;REV__USH2A|p.T3753Lfs*31|1|0.37|ENSG00000042781|chr1:215758727-215758727|T/-|frameshift_variant;REV__USH2A|p.V1147Gfs*56|1|0.38|ENSG00000042781|chr1:216199998-216199999|-/C|frameshift_variant;REV__USH2A|p.W2964Gfs*10|1|0.21|ENSG00000042781|chr1:215845989-215845989|A/-|frameshift_variant	33.51558372728122	0.7005509609380386	4				NaN	NaN	0	NaN	11104	3907	15012
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15038	38.338	NaN	2489.2	30	0	249.98	0.143			+	1517	AGAGTYLILH	10	61	508.28213308084366	1014.5497132284873	2	508.2812194824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AGAGTYLILH_	REV__ACACA|p.L1885_T1886insY|1|0.11|ENSG00000278540|chr17:37149887-37149888|-/GTA|inframe_insertion	68.78682469695295	0.28723163847957256	4				NaN	NaN	0	NaN	11123	3913	15037
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15050	38.365	NaN	3782.1	30	0	284.25	0.144	+			28104	NAFKEITTM	9	75	527.7652655011326	1053.515978069065	2	527.7649536132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAFKEITTM_	ENSG00000137947|ENST00000370500|GTF2B;ENST00000486078.1_1_1:89325774-89329699:-|nuORF;ENST00000494819.5_1_1:89324456-89357188:-|nuORF	93.1432384553994	0.056003526918089595	4				NaN	NaN	0	NaN	11132	3916	15049
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15073	38.421	NaN	3911.8	30	0	361.04	0.212				-1	YPMTDVFLICF	11	75	682.8150279472912	NaN	0	682.81494140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_YPM(Oxidation (M))TDVFLICF_	ENSG00000119729|ENST00000238738|RHOQ;ENST00000489471.5_3_2:46787807-46808219:+|nuORF;RHOQ|p.F175Lfs*6|1|0.05|ENSG00000119729|chr2:46580986-46580986|T/-|frameshift_variant;RHOQ|p.R193Efs*2|1|0.25|ENSG00000119729|chr2:46581035-46581035|A/-|frameshift_variant	20.94693142431847	0.456735970842152	4				NaN	NaN	0	NaN	11149	3922	15072
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15074	38.424	NaN	4608.9	30	0	373.77	0.037	+			14930	GTMEWIMIK	9	67	570.7746181033491	1139.534683273498	2	570.7745361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Oxidation (M)	_GTM(Oxidation (M))EWIM(Oxidation (M))IK_	ENSG00000168273|ENST00000477703|UQCC5	122.1759843771914	0.019882474861609503	4				NaN	NaN	0	NaN	11150	3922	15072
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15096	38.476	NaN	25845	30	0	4357.7	0.214	+			30028	PPQNLTVTV	9	77	484.77437053684116	967.5341881404823	2	484.7740478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PPQNLTVTV_	ENSG00000168995|ENST00000317643|SIGLEC7;nc|ENSG00000168995|Q9Y286-2|SIGLEC7	71.29570347882199	0.13518600952103718	4				NaN	NaN	0	NaN	11166	3928	15095
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15097	38.479	NaN	6736.4	30	0	3133.3	0.106				-1	 	0	66	576.3230677626283	575.3157912960282	1	576.322998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11167	3928	15095
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15098	38.481	NaN	1792.4	30	0	155.9	0.106	+			18153	ILPEPVVY	8	60	465.2684815689699	NaN	0	465.267333984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ILPEPVVY_	ENSG00000109805|ENST00000251496|NCAPG;ENST00000509719.1_1_4:17818900-17824753:+|nuORF;ENST00000514176.5_1_4:17816533-17825367:+|nuORF;NCAPG|p.I662Nfs*7|1|0.37|ENSG00000109805|chr4:17834391-17834392|-/A|frameshift_variant	21.70233525837049	1.7418937515398478	4				NaN	NaN	0	NaN	11168	3928	15095
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15099	38.483	NaN	2092.6	30	0	301.69	0.038	+			50062	WFHLNNQML	9	46	601.7905883789062	NaN	0	601.7905883789062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_WFHLNNQML_	ENST00000374875.5_1_10:33468482-33468866:-|nuORF	24.20275056022122	0.35506675290109213	4				NaN	NaN	0	NaN	11169	3928	15095
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15111	38.509	NaN	2452.7	30	0	213.56	0.145			+	17552	IDVIIEKIKD	10	58	593.3588256835938	NaN	0	593.3588256835938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IDVIIEKIKD_	REV__tr|U7SYW1|U7SYW1_FUSNUATPaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00939PE=3SV=1	22.579656572578934	0.4201028297492154	4				NaN	NaN	0	NaN	11178	3931	15110
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15122	38.536	NaN	8603	30	0	1824.5	0.214	+			49499	VVYVGGILTK	10	73	524.8239401119397	1047.6333272906793	2	524.8236694335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVYVGGILTK_	ENSG00000174607|ENST00000310836|UGT8	112.41091882917199	0.040839805697094264	4				NaN	NaN	0	NaN	11186	3934	15121
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15123	38.54	NaN	3829.9	30	0	977.83	0.106	+			6709	AYVYTPEVY	9	70	368.8481015306626	NaN	0	368.84820556640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AYVYTPEVY_	ENSG00000166111|ENST00000610966|SVOP	28.2542754592877	0.3349171602345879	4				NaN	NaN	0	NaN	11187	3934	15121
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15124	38.542	NaN	2904.4	30	0	416.77	0.106			+	17279	IAANVNPLPV	10	73	336.5340265806879	1006.5802503422638	3	336.53411865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IAANVNPLPV_	REV__ENSG00000113558|ENST00000353411|SKP1;REV__ENST00000506450.1_1_4:25624416-25624897:+|nuORF;REV__nc|ENSG00000113558|P63208-2|SKP1	18.324413293986947	0.7233354337501514	4				NaN	NaN	0	NaN	11188	3934	15121
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15125	38.544	NaN	3724	30	0	286.64	0.106	+			49940	VYVQHPITF	9	73	552.297938412351	1102.5813238915018	2	552.2979736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VYVQHPITF_	ENSG00000189067|ENST00000622633|LITAF;nc|ENSG00000189067|Q99732-2|LITAF;nc|ENSG00000189067|Q99732-3|LITAF	93.5975768576971	0.05472259948179787	4				NaN	NaN	0	NaN	11189	3934	15121
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15126	38.545	NaN	1851	30	0	85.399	0.035	+			15871	GYLADPAKF	9	60	491.2557067871094	NaN	0	491.2557067871094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GYLADPAKF_	ENSG00000137547|ENST00000260102|MRPL15	71.87747018426188	0.0992163553043454	4				NaN	NaN	0	NaN	11190	3934	15121
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15139	38.572	NaN	6941.3	30	0	1284.4	0.214	+			45912	VAQKNYFNI	9	76	548.7936700114553	NaN	0	548.7938232421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VAQKNYFNI_	ENSG00000147364|ENST00000350302|FBXO25;nc|ENSG00000147364|Q8TCJ0-3|FBXO25;nc|ENSG00000147364|Q8TCJ0|FBXO25	66.42927471994793	0.121898005645852	4				NaN	NaN	0	NaN	11200	3937	15138
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15140	38.576	NaN	5286.7	30	0	653.64	0.036	+			15823	GVYSFQFNK	9	68	545.272431771699	1088.5303106101978	2	545.2725830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GVYSFQFNK_	ENSG00000076067|ENST00000262031|RBMS2;ENST00000525031.2_1_12:94817522-94817669:-|nuORF	118.74307786436346	0.02196067127630568	4				NaN	NaN	0	NaN	11201	3937	15138
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15186	38.681	NaN	4601.9	30	0	718.78	0.214				-1	 	0	61	529.2728119198391	528.2655354532391	1	529.2710571289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11235	3949	15185
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15187	38.685	NaN	6594.7	30	0	1003.1	0.036	+			25019	LLGRVYNIY	9	74	555.8198370732244	1109.6251212132488	2	555.819091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LLGRVYNIY_	ENSG00000159618|ENST00000349457|ADGRG5;ENST00000394361.8_1_16:57596005-57608989:+|nuORF	74.25504064058377	0.12238981753128622	4				NaN	NaN	0	NaN	11236	3949	15185
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15200	38.712	NaN	6247.4	30	0	961.29	0.144	+			26974	LYLDEAHSI	9	77	530.7690172494866	1059.5234815657732	2	530.76904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LYLDEAHSI_	ENSG00000100596|ENST00000216484|SPTLC2	84.9155231211612	0.07920012719736333	4				NaN	NaN	0	NaN	11246	3952	15199
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15237	38.8	NaN	1750.4	30	0	193.2	0.14	+			44435	TSLTPPGM	8	46	402.20203972784464	NaN	0	402.2027893066406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSLTPPGM_	ENST00000309311.6_1_19:3983161-3983224:-|nuORF	35.200714571348534	1.7418937515398478	4				NaN	NaN	0	NaN	11274	3961	15236
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15246	38.821	NaN	6182.2	30	0	310.13	0.15			+	-1	FKWVCKQCRRW	11	92	827.4149790769638	NaN	0	827.4151000976562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_FKWVC(Carbamidomethyl (C))KQC(Carbamidomethyl (C))RRW_	REV__ENSG00000162975|ENST00000295082|KCNF1	9.705651100619752	0.456735970842152	4				NaN	NaN	0	NaN	11280	3964	15245
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15254	38.842	NaN	5368.5	30	0	2474.6	0.214			+	45789	VAGLLVGLA	9	55	406.76553142675374	811.5165099203075	2	406.765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VAGLLVGLA_	REV__ENSG00000099250|ENST00000374867|NRP1;REV__ENSG00000182013|ENST00000313683|PNMA8A;REV__nc|ENSG00000182013|Q86V59-2|PNMA8A	39.021493756699265	0.43173687394350213	4				NaN	NaN	0	NaN	11285	3967	15253
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15255	38.845	NaN	3285.6	30	0	403.94	0.035			+	9103	EGKPGPVGQL	10	60	491.27205116271165	980.5295493922233	2	491.2717590332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EGKPGPVGQL_	REV__ENSG00000197467|ENST00000645393|COL13A1;REV__nc|ENSG00000197467|Q5TAT6-10|COL13A1;REV__nc|ENSG00000197467|Q5TAT6-11|COL13A1;REV__nc|ENSG00000197467|Q5TAT6-2|COL13A1;REV__nc|ENSG00000197467|Q5TAT6-3|COL13A1;REV__nc|ENSG00000197467|Q5TAT6-4|COL13A1;REV__nc|ENSG00000197467|Q5TAT6-5|COL13A1;REV__nc|ENSG00000197467|Q5TAT6-6|COL13A1;REV__nc|ENSG00000197467|Q5TAT6-7|COL13A1;REV__nc|ENSG00000197467|Q5TAT6-8|COL13A1;REV__nc|ENSG00000197467|Q5TAT6-9|COL13A1;REV__nc|ENSG00000197467|Q5TAT6|COL13A1	33.921630207806714	0.6028135429846169	4				NaN	NaN	0	NaN	11286	3967	15253
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15276	38.896	NaN	3024	30	0	293.79	0.214	+			4403	ATIALMIQR	9	66	508.79912246360533	NaN	0	508.79931640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATIALMIQR_	ENSG00000119969|ENST00000348459|HELLS;nc|ENSG00000119969|Q9NRZ9-2|HELLS;nc|ENSG00000119969|Q9NRZ9-3|HELLS;nc|ENSG00000119969|Q9NRZ9-4|HELLS;nc|ENSG00000119969|Q9NRZ9-5|HELLS;nc|ENSG00000119969|Q9NRZ9-6|HELLS;nc|ENSG00000119969|Q9NRZ9-7|HELLS;nc|ENSG00000119969|Q9NRZ9-8|HELLS	74.25504064058377	0.09106938647426577	4				NaN	NaN	0	NaN	11301	3973	15275
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15277	38.899	NaN	2863.6	30	0	385.21	0.035				-1	 	0	59	336.53407897071105	1006.5804075123332	3	336.8684387207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11302	3973	15275
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15290	38.927	NaN	3426.9	30	0	457.46	0.143				-1	 	0	61	336.53407897071105	1006.5804075123332	3	336.5340881347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11312	3976	15289
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15305	38.959	NaN	4525.8	30	0	789.3	0.145				-1	ASRHFMKDP	9	69	368.8481015306626	NaN	0	368.8480224609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ASRHFM(Oxidation (M))KDP_	ENSG00000127152|ENST00000357195|BCL11B;nc|ENSG00000127152|Q9C0K0-2|BCL11B	36.446750945000026	0.29355505452396785	4				NaN	NaN	0	NaN	11324	3979	15304
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15317	38.987	NaN	7413.3	30	0	1767	0.214	+			30955	QENNLLKTL	9	80	536.8034709970499	1071.5923890608997	2	536.8036499023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QENNLLKTL_	ENSG00000102804|ENST00000458659|TSC22D1;ENST00000496314.1_1_13:45008764-45009186:-|nuORF;nc|ENSG00000102804|Q15714-2|TSC22D1;nc|ENSG00000102804|Q15714-3|TSC22D1;nc|ENSG00000102804|Q15714-5|TSC22D1	65.2775769800794	0.16962058972581526	4				NaN	NaN	0	NaN	11333	3982	15316
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15318	38.99	NaN	6628	30	0	478.52	0.106	+			18542	ISMDLQLTNK	10	77	581.8106211322929	NaN	0	581.8106689453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ISMDLQLTNK_	ENSG00000100280|ENST00000357586|AP1B1;ENST00000472057.1_1_22:29727525-29736761:-|nuORF;nc|ENSG00000100280|Q10567-2|AP1B1;nc|ENSG00000100280|Q10567-3|AP1B1;nc|ENSG00000100280|Q10567-4|AP1B1	139.38205640894643	0.008134388477213102	4				NaN	NaN	0	NaN	11334	3982	15316
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15319	38.992	NaN	3932.9	30	0	298.61	0.106	+			29263	NYATRIVTL	9	77	525.8005313427885	1049.586509752377	2	525.8005981445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NYATRIVTL_	BIRC6|p.A1071Lfs*23|1|0.39|ENSG00000115760|chr2:32431053-32431053|G/-|frameshift_variant;BIRC6|p.I2261Yfs*13|1|0.3|ENSG00000115760|chr2:32476268-32476268|A/-|frameshift_variant;BIRC6|p.I914Yfs*2|1|0.07|ENSG00000115760|chr2:32416027-32416027|A/-|frameshift_variant;BIRC6|p.K3585Sfs*8|1|0.32|ENSG00000115760|chr2:32515171-32515171|A/-|frameshift_variant;BIRC6|p.P1736Qfs*17|1|0.37|ENSG00000115760|chr2:32464770-32464770|C/-|frameshift_variant;BIRC6|p.R1406Dfs*3|1|0.35|ENSG00000115760|chr2:32442431-32442431|C/-|frameshift_variant;BIRC6|p.S2648Ffs*25|1|0.08|ENSG00000115760|chr2:32487769-32487770|-/T|frameshift_variant;BIRC6|p.S3504Mfs*5|1|0.15|ENSG00000115760|chr2:32513095-32513098|TAGT/-|frameshift_variant;BIRC6|p.T1339Qfs*21|1|0.44|ENSG00000115760|chr2:32442131-32442131|A/-|frameshift_variant;ENSG00000115760|ENST00000421745|BIRC6	74.1650062923329	0.12277912660386392	4				NaN	NaN	0	NaN	11335	3982	15316
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15320	38.994	NaN	3148.7	30	0	640.84	0.038	+			28582	NKKIDEKDIL	10	56	608.3522338867188	NaN	0	608.3522338867188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NKKIDEKDIL_	tr|U7SVX6|U7SVX6_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01374PE=4SV=1	54.722347961057174	0.27574710963839943	4				NaN	NaN	0	NaN	11336	3982	15316
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15332	39.02	NaN	3546.3	30	0	366.83	0.214	+			1300	AESTNILKL	9	65	494.78762023015844	987.5606875271169	2	494.7871398925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AESTNILKL_	CASP5|p.K187Rfs*33|1|0.29|ENSG00000137757|chr11:105002185-105002185|T/-|frameshift_variant;CASP5|p.N178Ifs*8|5|0.27|ENSG00000137757|chr11:105003284-105003284|T/-|frameshift_variant;ENSG00000137757|ENST00000260315|CASP5;nc|ENSG00000137757|P51878-2|CASP5;nc|ENSG00000137757|P51878-3|CASP5;nc|ENSG00000137757|P51878-5|CASP5;nc|ENSG00000137757|P51878-6|CASP5	107.00750918261382	0.032051501805654005	4				NaN	NaN	0	NaN	11345	3985	15331
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15333	39.024	NaN	3791.8	30	0	474.21	0.106	+			6761	CEFAFNMKK	9	67	567.2596262764744	1132.5046996197486	2	567.259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_CEFAFNM(Oxidation (M))KK_	ENSG00000166949|ENST00000327367|SMAD3;nc|ENSG00000166949|P84022-2|SMAD3;nc|ENSG00000166949|P84022-3|SMAD3;SMAD3|p.L153Tfs*13|1|0.33|ENSG00000166949|chr15:67165301-67165302|-/C|frameshift_variant;SMAD3|p.P152Hfs*34|1|0.11|ENSG00000166949|chr15:67165302-67165302|C/-|frameshift_variant;SMAD3|p.V331Rfs*31|1|0.42|ENSG00000166949|chr15:67184843-67184844|-/C|frameshift_variant	53.351449002276354	0.2690372970092375	4				NaN	NaN	0	NaN	11346	3985	15331
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15334	39.026	NaN	1913.4	30	0	164.81	0.106			+	11476	FNSVLSSLNP	10	66	539.2845103937209	NaN	0	539.2843017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FNSVLSSLNP_	REV__ENSG00000100991|ENST00000252015|TRPC4AP;REV__nc|ENSG00000100991|Q8TEL6-2|TRPC4AP;REV__nc|ENSG00000100991|Q8TEL6-3|TRPC4AP;REV__TRPC4AP|p.N270Mfs*8|1|0.04|ENSG00000100991|chr20:35044561-35044561|T/-|frameshift_variant	36.31764250033197	0.3809266711384728	4				NaN	NaN	0	NaN	11347	3985	15331
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15335	39.028	NaN	1731.2	30	0	132.66	0.037			+	2379	ANLQILVMGAP	11	62	563.8167033033778	1125.6188536735556	2	564.3178100585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ANLQILVMGAP_	REV__ENSG00000242419|ENST00000306593|PCDHGC4;REV__nc|ENSG00000242419|Q9Y5F7-2|PCDHGC4	40.77816245573522	0.5472954108598816	4				NaN	NaN	0	NaN	11348	3985	15331
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15348	39.055	NaN	3822.6	30	0	542.91	0.145	+			12569	GEGQFGEVHL	10	70	536.756523596088	1071.4984942589758	2	536.7568969726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEGQFGEVHL_	ENSG00000162733|ENST00000367921|DDR2;ENSG00000204580|ENST00000376568|DDR1;nc|ENSG00000204580|Q08345-2|DDR1;nc|ENSG00000204580|Q08345-5|DDR1;nc|ENSG00000204580|Q08345-6|DDR1	55.08391021199286	0.41055145962533396	4				NaN	NaN	0	NaN	11358	3988	15347
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15360	39.083	NaN	3536.7	30	0	265.35	0.214			+	31566	QLPDIFNQK	9	66	551.7985992713348	1101.5826456094694	2	551.7986450195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QLPDIFNQK_	REV__ENSG00000107295|ENST00000380607|SH3GL2;REV__ENSG00000141985|ENST00000269886|SH3GL1;REV__nc|ENSG00000141985|Q99961-2|SH3GL1	79.71258880314673	0.09879134589249085	4				NaN	NaN	0	NaN	11367	3991	15359
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15361	39.086	NaN	2048.8	30	0	302.33	0.036	+			27594	MPLHLLGCLL	10	55	555.3143931545056	1108.6142333758112	2	555.31494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MPLHLLGCLL_	ENST00000431994.5_1_16:32890029-32891910:-|nuORF	26.79610172149135	0.6610034878437611	4				NaN	NaN	0	NaN	11368	3991	15359
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15379	39.131	NaN	4126.4	30	0	366.17	0.145				-1	YKHALVNKMYG	11	71	670.347201926672	1338.679850920144	2	670.3456420898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_YKHALVNKM(Oxidation (M))YG_	ENSG00000134900|ENST00000376052|TPP2;ENST00000466153.5_1_13:103307300-103330663:+|nuORF;nc|ENSG00000134900|P29144|TPP2	31.529811441608018	0.6590691889962369	4				NaN	NaN	0	NaN	11380	3997	15378
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15393	39.162	NaN	6947.6	30	0	1047.7	0.214	+			10694	EYVKQTWNL	9	72	590.8038483454441	1179.593143757688	2	590.8035888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EYVKQTWNL_	ENSG00000165025|ENST00000375754|SYK;nc|ENSG00000165025|P43405-2|SYK;SYK|p.E442Sfs*31|1|0.11|ENSG00000165025|chr9:90877711-90877711|C/-|frameshift_variant;SYK|p.S553Afs*9|1|0.05|ENSG00000165025|chr9:90887821-90887821|A/-|frameshift_variant	190.2614974402762	0.00026591377982909756	4				NaN	NaN	0	NaN	11391	4000	15392
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15394	39.166	NaN	5191.7	30	0	263.58	0.106				-1	RRDWDCFWKRK	11	97	826.9140747838954	NaN	0	826.9140014648438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_RRDWDC(Carbamidomethyl (C))FWKRK_	nc|ENSG00000151418|Q96LB4-3|ATP6V1G3	9.182911543092327	0.456735970842152	4				NaN	NaN	0	NaN	11392	4000	15392
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15395	39.168	NaN	2328.5	30	0	179.83	0.106				-1	 	0	65	543.3011655812028	542.2938891146027	1	543.3027954101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11393	4000	15392
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15396	39.17	NaN	1925.5	30	0	238.17	0.035	+			17068	HRENGLEY	8	45	509.24017063715394	1016.4657883411079	2	509.24005126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HRENGLEY_	ENSG00000154118|ENST00000284262|JPH3;JPH3|p.T482Pfs*127|1|0.4|ENSG00000154118|chr16:87689800-87689800|C/-|frameshift_variant	60.29395666154354	0.49887135096048313	4				NaN	NaN	0	NaN	11394	4000	15392
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15408	39.195	NaN	2240.1	30	0	172.12	0.143	+			9715	EMMEEDLQ	8	50	512.7013327820482	1023.3881126308964	2	512.70166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EMMEEDLQ_	CREBBP|p.Q2411Sfs*2|1|0.24|ENSG00000005339|chr16:3727816-3727816|G/-|frameshift_variant;ENSG00000005339|ENST00000262367|CREBBP;ENST00000573672.1_1_16:3817649-3820675:-|nuORF;nc|ENSG00000005339|Q92793-2|CREBBP	24.20275056022122	0.7724576178584145	4				NaN	NaN	0	NaN	11403	4003	15407
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15445	39.283	NaN	2766.7	30	0	339.54	0.214				-1	 	0	65	336.53407897071105	1006.5804075123332	3	336.5341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11431	4012	15444
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15446	39.287	NaN	2812.9	30	0	352.33	0.106	+			35180	SAIKENFQF	9	58	542.2771580167954	1082.5397631003907	2	542.2774047851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAIKENFQF_	ENSG00000173193|ENST00000474629|PARP14;nc|ENSG00000173193|Q460N5-1|PARP14;nc|ENSG00000173193|Q460N5-3|PARP14;nc|ENSG00000173193|Q460N5-4|PARP14;PARP14|p.N1416Efs*19|1|0.2|ENSG00000173193|chr3:122718388-122718389|-/A|frameshift_variant	42.86426827375447	0.38666266728046506	4				NaN	NaN	0	NaN	11432	4012	15444
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15447	39.289	NaN	3464.9	30	0	279.99	0.036	+			7486	DGEGATGIFTK	11	55	548.269877708385	1094.52520248357	2	548.7770385742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DGEGATGIFTK_	tr|U7T6T2|U7T6T2_FUSNUAutotransporterdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00158PE=4SV=1	31.529811441608018	0.6590691889962369	4				NaN	NaN	0	NaN	11433	4012	15444
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15456	39.31	NaN	3712.5	30	0	374.18	0.144	+			49946	VYVQNVVKL	9	66	531.3215652472335	1060.6285775612669	2	531.3217163085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYVQNVVKL_	AP3D1|p.A531T|1|0.3|ENSG00000065000|chr19:2118723-2118723|C/T|missense_variant;ENSG00000065000|ENST00000643116|AP3D1;nc|ENSG00000065000|O14617-2|AP3D1;nc|ENSG00000065000|O14617-3|AP3D1;nc|ENSG00000065000|O14617-4|AP3D1;nc|ENSG00000065000|O14617|AP3D1	111.64827973302667	0.027316110422332632	4				NaN	NaN	0	NaN	11439	4015	15455
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15465	39.332	NaN	13588	30	0	2403.7	0.212	+			27509	MNDVLENELQC	11	83	654.2837237641027	1306.5528945950052	2	654.2833862304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MNDVLENELQC_	ENSG00000112130|ENST00000373479|RNF8;ENST00000229866.10_1_6:37328318-37358531:+|nuORF;nc|ENSG00000112130|O76064-3|RNF8	23.52269567125451	0.7430573033454468	4				NaN	NaN	0	NaN	11445	4018	15464
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15466	39.336	NaN	5437.6	30	0	1532.7	0.106				-1	FSQFCRLF	8	66	368.8478431160498	1103.5216999483494	3	368.8479309082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_FSQFC(Carbamidomethyl (C))RLF_	ENSG00000115112|ENST00000263707|TFCP2L1;TFCP2L1|p.Q427Sfs*18|1|0.32|ENSG00000115112|chr2:121231888-121231888|G/-|frameshift_variant	23.04248740728303	0.7814162927298575	4				NaN	NaN	0	NaN	11446	4018	15464
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15467	39.338	NaN	6769	30	0	468.34	0.106	+			50800	YEQILNTKL	9	67	561.3138856327506	1120.6132183323011	2	561.3140258789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YEQILNTKL_	ENSG00000174574|ENST00000432648|AKIRIN1	99.01295224348159	0.040209060045561164	4				NaN	NaN	0	NaN	11447	4018	15464
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15468	39.34	NaN	2265.2	30	0	160.05	0.035	+			1842	AIIVGSIITK	10	59	507.83192357681577	1013.6492942204316	2	507.8316955566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AIIVGSIITK_	ENSG00000112578|ENST00000230340|BYSL	47.95952297671804	0.47580206326914537	4				NaN	NaN	0	NaN	11448	4018	15464
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15481	39.367	NaN	4438.3	30	0	718.18	0.214	+			33761	RPTDVAISF	9	58	503.271650231253	1004.528747529306	2	503.2716979980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RPTDVAISF_	ENSG00000052749|ENST00000370992|RRP12;nc|ENSG00000052749|Q5JTH9-2|RRP12;nc|ENSG00000052749|Q5JTH9-3|RRP12	44.377184641726394	0.36891676396732553	4				NaN	NaN	0	NaN	11458	4021	15480
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15482	39.37	NaN	5400.5	30	0	686.88	0.106	+			26911	LYAPYSTHF	9	68	549.7678140039584	1097.5210750747167	2	549.7669067382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LYAPYSTHF_	ENSG00000013588|ENST00000014914|GPRC5A	57.81127852772723	0.2318599694398087	4				NaN	NaN	0	NaN	11459	4021	15480
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15483	39.372	NaN	1910.9	30	0	143.37	0.106				-1	 	0	51	434.1853357276717	433.1780592610717	1	435.18603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11460	4021	15480
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15484	39.374	NaN	4549.9	30	0	1510.1	0.035				-1	TQCLRSGVV	9	62	510.2707821990854	NaN	0	510.27105712890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_TQC(Carbamidomethyl (C))LRSGVV_	ENST00000366987.6_2_1:212793496-212793775:+|nuORF	47.657333605630114	0.2228375344433429	4				NaN	NaN	0	NaN	11461	4021	15480
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15497	39.402	NaN	10737	30	0	1785.2	0.214	+			45617	TYQDIQNTI	9	63	548.269877708385	1094.52520248357	2	548.2694702148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TYQDIQNTI_	ENSG00000181222|ENST00000674977|POLR2A;nc|ENSG00000181222|P24928|POLR2A	126.24258497203832	0.01742065577488747	4				NaN	NaN	0	NaN	11471	4024	15496
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15498	39.406	NaN	3109.3	30	0	1292.3	0.106	+			46545	VFGTGAMR	8	48	419.71577263050307	837.4169923278062	2	419.71600341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VFGTGAMR_	ENSG00000196329|ENST00000358647|GIMAP5;nc|ENSG00000196329|Q96F15-2|GIMAP5	29.14955571784316	0.7342621283720113	4				NaN	NaN	0	NaN	11472	4024	15496
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15499	39.408	NaN	3860.9	30	0	426.42	0.106	+			49713	VYMELSQKL	9	74	555.7973986504802	1109.5802443677603	2	555.7969970703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYMELSQKL_	ENSG00000139926|ENST00000344768|FRMD6;FRMD6|p.K193Rfs*5|1|0.41|ENSG00000139926|chr14:51708091-51708091|G/-|frameshift_variant;nc|ENSG00000139926|Q96NE9-2|FRMD6	51.19269402634007	0.2889735674168909	4				NaN	NaN	0	NaN	11473	4024	15496
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15500	39.409	NaN	5317.1	30	0	442.37	0.036				-1	VCSQQLQPC	9	64	560.2490681328237	1118.4835833324473	2	560.248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_VC(Carbamidomethyl (C))SQQLQPC(Carbamidomethyl (C))_	ENST00000554631.2_1_14:95624549-95624717:+|nuORF	44.116797842482775	0.37197099687881774	4				NaN	NaN	0	NaN	11474	4024	15496
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15511	39.433	NaN	3217.8	30	0	366.72	0.145				-1	MTCYDQNGR	9	63	572.7294424477017	1143.4443319622033	2	572.73046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_MTC(Carbamidomethyl (C))YDQNGR_	THSD7A|p.A1004T|1|0.42|ENSG00000005108|chr7:11446115-11446115|C/T|missense_variant	31.529811441608018	0.5085848003137583	4				NaN	NaN	0	NaN	11482	4027	15510
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15523	39.46	NaN	3056.9	30	0	309.08	0.214				-1	SEILLPMLL	9	67	522.805931011624	1043.597309090048	2	522.8060302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_SEILLPM(Oxidation (M))LL_	ENSG00000180043|ENST00000424985|GARIN5B	40.5726180659479	0.4135428067754104	4				NaN	NaN	0	NaN	11491	4030	15522
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15524	39.464	NaN	3529.8	30	0	399.2	0.106				-1	MTMPCPNFY	9	66	580.7315535484798	1159.4485541637596	2	580.7313842773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_MTMPC(Carbamidomethyl (C))PNFY_	ENSG00000161204|ENST00000429586|ABCF3;ENST00000468892.5_1_3:183910449-183911483:+|nuORF;ENST00000473311.5_1_3:183906074-183911483:+|nuORF;nc|ENSG00000161204|Q9NUQ8-2|ABCF3	44.116797842482775	0.37197099687881774	4				NaN	NaN	0	NaN	11492	4030	15522
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15525	39.466	NaN	2763.2	30	0	472.06	0.036	+			45637	TYRKCYML	8	61	539.2643118710681	NaN	0	539.2647094726562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TYRKCYML_	ENSG00000146216|ENST00000259750|TTBK1;nc|ENSG00000146216|Q5TCY1-2|TTBK1;TTBK1|p.P669Hfs*4|1|0.1|ENSG00000146216|chr6:43282742-43282742|C/-|frameshift_variant	33.51558372728122	1.7418937515398478	4				NaN	NaN	0	NaN	11493	4030	15522
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15545	39.515	NaN	2158.7	30	0	252.84	0.142	+			12076	GAAGVHFIY	9	53	467.74299978954593	933.4714466458919	2	467.7423095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GAAGVHFIY_	ENSG00000169813|ENST00000682386|HNRNPF	39.021493756699265	0.43173687394350213	4				NaN	NaN	0	NaN	11507	4036	15544
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15558	39.544	NaN	1518.9	30	0	172.91	0.214	+			46886	VINLRLSET	9	55	522.805931011624	1043.597309090048	2	523.306396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VINLRLSET_	ENSG00000089195|ENST00000203001|TRMT6;ENST00000466974.5_1_20:5919183-5921791:-|nuORF;nc|ENSG00000089195|Q9UJA5-4|TRMT6;TRMT6|p.G419W|1|0.11|ENSG00000089195|chr20:5941100-5941100|C/A|missense_variant	24.20275056022122	0.577060078256802	4				NaN	NaN	0	NaN	11517	4039	15557
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15559	39.548	NaN	5257.3	30	0	320.7	0.106				-1	FRRSWWRTWCL	11	93	827.4156073154321	NaN	0	827.4157104492188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_FRRSWWRTWC(Carbamidomethyl (C))L_	ENST00000478155.5_1_2:1648438-1667521:-|nuORF	2.718429308559148	0.456735970842152	4				NaN	NaN	0	NaN	11518	4039	15557
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15560	39.55	NaN	2200.7	30	0	262.6	0.037	+			25001	LLEYHIAYL	9	61	567.8109741210938	NaN	0	567.8109741210938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LLEYHIAYL_	ENSG00000114416|ENST00000357559|FXR1;ENST00000476672.1_1_3:180675662-180688154:+|nuORF;FXR1|p.T526Sfs*13|1|0.07|ENSG00000114416|chr3:180970330-180970331|-/TCTGTATTATC|frameshift_variant;nc|ENSG00000114416|P51114-2|FXR1;nc|ENSG00000114416|P51114-3|FXR1	28.2542754592877	0.3349171602345879	4				NaN	NaN	0	NaN	11519	4039	15557
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15572	39.576	NaN	7099.1	30	0	1427.5	0.214	+			31495	QLEGRLAL	8	55	450.2689715059911	898.5233900787822	2	450.2687683105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QLEGRLAL_	ENSG00000185775|ENST00000332857|SPATA31A6;ENSG00000204849|ENST00000377647|SPATA31A1;ENSG00000275969|ENST00000428649|SPATA31A3;ENSG00000276040|ENST00000619167|SPATA31A7;ENSG00000276581|ENST00000437823|SPATA31A5;SPATA31A1|p.T1192Nfs*14|1|0.28|ENSG00000204849|chr9:39361333-39361334|-/A|frameshift_variant;SPATA31A1|p.T1192Qfs*2|2|0.24|ENSG00000204849|chr9:39361334-39361334|A/-|frameshift_variant;SPATA31A3|p.S1180Kfs*9|1|0.25|ENSG00000275969|chr9:66986959-66986960|-/T|frameshift_variant;SPATA31A6|p.N1191Tfs*16|1|0.12|ENSG00000185775|chr9:42189269-42189269|A/-|frameshift_variant;SPATA31A6|p.T1188Qfs*2|1|0.26|ENSG00000185775|chr9:42189259-42189259|A/-|frameshift_variant	55.50420428727701	0.5462892107279674	4				NaN	NaN	0	NaN	11528	4042	15571
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15573	39.579	NaN	1348.5	30	0	216.42	0.034	+			44584	TTCKNHPY	8	41	482.22167459555277	962.4287962579056	2	482.22161865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTCKNHPY_	ENSG00000138801|ENST00000265174|PAPSS1	25.450171626174864	0.7628259754767981	4				NaN	NaN	0	NaN	11529	4042	15571
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15594	39.631	NaN	2887.5	30	0	494.18	0.214				-1	 	0	68	336.53407897071105	1006.5804075123332	3	336.53424072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11544	4048	15593
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15595	39.635	NaN	1248.3	30	0	105.86	0.035	+			45591	TYNWAPDL	8	53	490.2288985330145	978.443244132829	2	490.22857666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TYNWAPDL_	ENSG00000198198|ENST00000634258|SZT2;nc|ENSG00000198198|Q5T011-5|SZT2;SZT2|p.P2844Rfs*9|1|0.34|ENSG00000198198|chr1:43443669-43443669|C/-|frameshift_variant;SZT2|p.R3241Afs*11|1|0.33|ENSG00000198198|chr1:43448401-43448401|G/-|frameshift_variant	33.51558372728122	0.7005509609380386	4				NaN	NaN	0	NaN	11545	4048	15593
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15603	39.655	NaN	1909.3	30	0	226.86	0.144				-1	 	0	56	540.2855903346355	539.2783138680354	1	540.2860107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11550	4051	15602
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15612	39.677	NaN	4585.3	30	0	1355	0.214				-1	MGCCGCSGGCG	11	71	369.1036756540383	NaN	0	368.8480529785156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	3 Carbamidomethyl (C)	_MGC(Carbamidomethyl (C))C(Carbamidomethyl (C))GCSGGC(Carbamidomethyl (C))G_	ENSG00000185940|ENST00000399676|KRTAP5-5;ENSG00000204571|ENST00000398530|KRTAP5-11;ENSG00000204572|ENST00000398531|KRTAP5-10;ENSG00000205864|ENST00000382160|KRTAP5-6;ENSG00000205869|ENST00000382171|KRTAP5-1;ENSG00000241233|ENST00000398534|KRTAP5-8;ENSG00000241598|ENST00000399682|KRTAP5-4;ENSG00000254997|ENST00000528743|KRTAP5-9;nc|ENSG00000241598|Q6L8H1|KRTAP5-4	9.21180021271957	0.456735970842152	4				NaN	NaN	0	NaN	11556	4054	15611
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15613	39.68	NaN	4948.5	30	0	567.18	0.106	+			45665	TYVSGTLRF	9	66	522.2797525087008	1042.5449520842014	2	522.2805786132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TYVSGTLRF_	ENSG00000134255|ENST00000357172|CEPT1	95.81516180277367	0.04847050768394289	4				NaN	NaN	0	NaN	11557	4054	15611
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15614	39.682	NaN	2313.3	30	0	371.38	0.037	+			41506	SVPLSDALLNK	11	49	578.8325180115486	1155.650483089897	2	578.8330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVPLSDALLNK_	ENSG00000112742|ENST00000369798|TTK;ENST00000430061.2_1_6:80715671-80721208:+|nuORF;nc|ENSG00000112742|P33981-2|TTK;TTK|p.K192Sfs*18|6|0.28|ENSG00000112742|chr6:80010913-80010913|A/-|frameshift_variant;TTK|p.L364Pfs*8|1|0.04|ENSG00000112742|chr6:80014568-80014569|-/CCATAAATAGTAG|frameshift_variant;TTK|p.S162Vfs*9|1|0.34|ENSG00000112742|chr6:80010822-80010822|A/-|frameshift_variant	29.170058357718403	0.683821074385409	4				NaN	NaN	0	NaN	11558	4054	15611
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15625	39.708	NaN	2834.9	30	0	230.83	0.145	+			39663	STIFYYVQK	9	61	574.803406689818	1147.5922604464358	2	574.8029174804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STIFYYVQK_	ENSG00000092148|ENST00000399332|HECTD1;HECTD1|p.F2271Lfs*13|1|0.16|ENSG00000092148|chr14:31107059-31107059|A/-|frameshift_variant;HECTD1|p.I2041Lfs*27|1|0.36|ENSG00000092148|chr14:31113133-31113133|T/-|frameshift_variant	47.657333605630114	0.33044192980041115	4				NaN	NaN	0	NaN	11566	4057	15624
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15639	39.739	NaN	2445.3	30	0	314.37	0.214	+			36337	SESSLALRL	9	53	488.27680918648844	974.5390654397769	2	488.27703857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SESSLALRL_	DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;nc|ENSG00000187908|Q9UGM3-2|DMBT1;nc|ENSG00000187908|Q9UGM3-2|DMBT1;nc|ENSG00000187908|Q9UGM3-2|DMBT1;nc|ENSG00000187908|Q9UGM3-2|DMBT1;nc|ENSG00000187908|Q9UGM3-2|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-4|DMBT1;nc|ENSG00000187908|Q9UGM3-4|DMBT1;nc|ENSG00000187908|Q9UGM3-4|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-8|DMBT1;nc|ENSG00000187908|Q9UGM3-8|DMBT1;nc|ENSG00000187908|Q9UGM3-8|DMBT1;nc|ENSG00000187908|Q9UGM3-8|DMBT1;nc|ENSG00000187908|Q9UGM3-9|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1	77.31757898189308	0.1091473830098891	4				NaN	NaN	0	NaN	11577	4060	15638
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15640	39.742	NaN	1151.4	30	0	218.61	0.033				-1	LDAAMTYC	8	34	452.18223179302726	902.3499106528545	2	452.1821594238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LDAAM(Oxidation (M))TYC_	ENSG00000072121|ENST00000347230|ZFYVE26;ENST00000394455.6_1_14:68196461-68236507:-|nuORF;nc|ENSG00000072121|Q68DK2-2|ZFYVE26;nc|ENSG00000072121|Q68DK2-3|ZFYVE26;nc|ENSG00000072121|Q68DK2-5|ZFYVE26;ZFYVE26|p.D2439Efs*31|1|0.04|ENSG00000072121|chr14:67752398-67752399|-/T|frameshift_variant;ZFYVE26|p.D2513Mfs*3|1|0.29|ENSG00000072121|chr14:67748519-67748519|C/-|frameshift_variant	26.79610172149135	0.7524337208463756	4				NaN	NaN	0	NaN	11578	4060	15638
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15663	39.795	NaN	5438.9	30	0	842.1	0.214	+			39804	STLDIVLANK	10	77	537.3137326193654	1072.6129123055307	2	537.3143920898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STLDIVLANK_	ENSG00000167325|ENST00000300738|RRM1	154.0112374973812	0.007783311651969589	4				NaN	NaN	0	NaN	11595	4066	15662
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15664	39.799	NaN	3934.1	30	0	766.98	0.106				-1	 	0	50	339.2206546557886	676.4267563783773	2	339.2208251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11596	4066	15662
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15665	39.801	NaN	5159.1	30	0	760.85	0.106			+	-1	EGCSVCCFH	9	71	549.6923461533316	1097.3701393734632	2	549.6920776367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_EGC(Carbamidomethyl (C))SVC(Carbamidomethyl (C))CFH_	REV__ENSG00000140682|ENST00000394863|TGFB1I1;REV__ENST00000567066.6_1_16:31483405-31488894:+|nuORF;REV__nc|ENSG00000140682|O43294-2|TGFB1I1	38.80614096846853	0.43426287593479557	4				NaN	NaN	0	NaN	11597	4066	15662
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15666	39.802	NaN	3646.5	30	0	963.45	0.106	+			8067	DVKLIQTM	8	65	474.26551996432335	946.5164869954467	2	474.26495361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DVKLIQTM_	ENSG00000138767|ENST00000504123|CNOT6L;nc|ENSG00000138767|Q96LI5-2|CNOT6L	56.72105179125745	0.5342425954139568	4				NaN	NaN	0	NaN	11598	4066	15662
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15667	39.804	NaN	2351	30	0	316.8	0.037	+			10218	ETGSLDFRTF	10	51	586.7827758789062	NaN	0	586.7827758789062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ETGSLDFRTF_	ENSG00000177054|ENST00000446113|ZDHHC13;ENST00000525490.5_1_11:19138758-19188042:+|nuORF;nc|ENSG00000177054|Q8IUH4-2|ZDHHC13;nc|ENSG00000177054|Q8IUH4-3|ZDHHC13	30.317721548370564	0.4006274431774794	4				NaN	NaN	0	NaN	11599	4066	15662
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15679	39.83	NaN	5700.5	30	0	824.15	0.214	+			28218	NAVKDFTSF	9	70	514.756278252938	1027.498003572676	2	514.7557983398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAVKDFTSF_	ENSG00000168769|ENST00000380013|TET2;nc|ENSG00000168769|Q6N021-2|TET2;nc|ENSG00000168769|Q6N021-3|TET2;TET2|p.M695Tfs*4|1|0.41|ENSG00000168769|chr4:105236026-105236029|TGTC/-|frameshift_variant;TET2|p.N202Tfs*5|1|0.32|ENSG00000168769|chr4:105234543-105234543|A/-|frameshift_variant;TET2|p.V1949Sfs*7|1|0.31|ENSG00000168769|chr4:105276348-105276349|-/A|frameshift_variant	75.04331003522576	0.118981335847003	4				NaN	NaN	0	NaN	11608	4069	15678
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15680	39.834	NaN	2522.5	30	0	228.94	0.036			+	18889	IVIVNFLLK	9	58	529.852140034889	NaN	0	529.8516845703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IVIVNFLLK_	REV__CFAP69|p.K687Nfs*43|3|0.26|ENSG00000105792|chr7:90303973-90303973|A/-|frameshift_variant;REV__ENSG00000105792|ENST00000389297|CFAP69;REV__ENST00000451029.5_1_7:89905415-89916830:+|nuORF;REV__ENST00000475031.5_1_7:89901258-89916830:+|nuORF;REV__nc|ENSG00000105792|A5D8W1-2|CFAP69;REV__nc|ENSG00000105792|A5D8W1-5|CFAP69	39.252832667884924	0.27938773122138094	4				NaN	NaN	0	NaN	11609	4069	15678
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15693	39.861	NaN	1661.4	30	0	332.92	0.214				-1	 	0	61	347.2035886050302	346.1963121384302	1	347.201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11619	4072	15692
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15694	39.865	NaN	2565.2	30	0	358.33	0.036	+			6622	AYQSVQETW	9	63	556.2567496184153	1110.4989463036304	2	556.2561645507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AYQSVQETW_	ENSG00000204385|ENST00000229729|SLC44A4;nc|ENSG00000204385|Q53GD3-3|SLC44A4;nc|ENSG00000204385|Q53GD3-4|SLC44A4;SLC44A4|p.F618Sfs*25|1|0.43|ENSG00000204385|chr6:31864889-31864889|A/-|frameshift_variant;SLC44A4|p.G398Afs*7|1|0.29|ENSG00000204385|chr6:31869197-31869197|G/-|frameshift_variant;SLC44A4|p.S619Lfs*9|1|0.31|ENSG00000204385|chr6:31864888-31864889|-/A|frameshift_variant	96.0336014099291	0.047854655524928534	4				NaN	NaN	0	NaN	11620	4072	15692
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15705	39.89	NaN	3073.9	30	0	311.16	0.214				-1	DVLGHFVGSM	10	61	539.255494888846	1076.4964368444919	2	539.2561645507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_DVLGHFVGSM(Oxidation (M))_	NEB|p.Y681F|1|0.3|ENSG00000183091|chr2:151692123-151692123|T/A|missense_variant	51.33545320467046	0.4446945571623749	4				NaN	NaN	0	NaN	11628	4075	15704
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15706	39.894	NaN	2549.4	30	0	197.77	0.106	+			16702	HKSVQHVVL	9	71	523.8082223646172	1045.6018917960344	2	523.8087158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HKSVQHVVL_	ENSG00000169410|ENST00000618819|PTPN9	34.172542307311794	0.4838870758800184	4				NaN	NaN	0	NaN	11629	4075	15704
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15707	39.896	NaN	5014.7	30	0	265.77	0.044			+	-1	CWRRSRYRRSQ	11	90	826.9140996689808	NaN	0	826.9120483398438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))C(Carbamidomethyl (C))WRRSRYRRSQ_	REV__ENST00000327026.7_1_17:80136426-80141741:-|nuORF	12.206681093483082	0.456735970842152	4				NaN	NaN	0	NaN	11630	4075	15704
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15713	39.912	NaN	2488.5	30	0	340.41	0.214	+			44528	TSVLLASGVSI	11	67	523.8082223646172	1045.6018917960344	2	523.8082275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSVLLASGVSI_	ENSG00000198938|ENST00000362079|MT-CO3	37.81151784470057	0.5878881669006212	4				NaN	NaN	0	NaN	11633	4078	15712
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15714	39.915	NaN	5312.9	30	0	273.14	0.106			+	-1	FKWVCKQCRRW	11	94	827.416748046875	NaN	0	827.416748046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_FKWVC(Carbamidomethyl (C))KQC(Carbamidomethyl (C))RRW_	REV__ENSG00000162975|ENST00000295082|KCNF1	0.8280856835056912	0.456735970842152	4				NaN	NaN	0	NaN	11634	4078	15712
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15715	39.917	NaN	4150.6	30	0	535.22	0.041	+			34714	RVVKEEKYQLK	11	72	710.4167249839	NaN	0	710.4178466796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RVVKEEKYQLK_	TTN|p.V10632Yfs*16|1|0.16|ENSG00000155657|chr2:178683254-178683254|T/-|frameshift_variant	22.579656572578934	0.456735970842152	4				NaN	NaN	0	NaN	11635	4078	15712
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15722	39.934	NaN	3036.2	30	0	306.66	0.214	+			14654	GTIAGLNVLR	10	54	507.3089395709327	1012.6033262086654	2	507.3085632324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTIAGLNVLR_	ENSG00000109971|ENST00000534624|HSPA8;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;ENST00000508840.1_1_8:30095113-30095479:+|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;ENST00000532167.5_1_11:122930757-122931830:-|nuORF;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;HSPA8|p.K569Dfs*6|1|0.3|ENSG00000109971|chr11:123058302-123058303|TC/-|frameshift_variant;nc|ENSG00000109971|P11142-2|HSPA8	82.83050618871818	0.17249597090446123	4				NaN	NaN	0	NaN	11639	4081	15721
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15723	39.937	NaN	2406.4	30	0	282.63	0.037			+	42951	TEISYSTAIF	10	61	566.2823078378321	1130.5500627424642	2	566.2827758789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEISYSTAIF_	REV__NPY4R|p.V45A|1|0.15|ENSG00000204174|chr10:46462502-46462502|A/G|missense_variant	37.15910966729921	0.575322462179216	4				NaN	NaN	0	NaN	11640	4081	15721
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15734	39.961	NaN	4681.3	30	0	843	0.214	+			7794	DPHQQIYTF	9	67	574.7727124443268	1147.5308719554534	2	574.7730102539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DPHQQIYTF_	ENSG00000134452|ENST00000362091|FBH1;nc|ENSG00000134452|Q8NFZ0-2|FBH1	40.05817265558897	0.419577045485086	4				NaN	NaN	0	NaN	11648	4084	15733
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15735	39.965	NaN	2678.6	30	0	231.29	0.106	+			29700	PHALHLPAPP	10	61	525.297092116651	1048.579631300102	2	525.2979125976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PHALHLPAPP_	ENST00000426508.6_2_16:1642283-1652410:-|nuORF	54.76467175910256	0.41345489472286195	4				NaN	NaN	0	NaN	11649	4084	15733
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15736	39.967	NaN	1962.4	30	0	213.07	0.106				-1	 	0	67	325.185458981991	648.3563650307821	2	325.18572998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11650	4084	15733
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15737	39.969	NaN	5310.8	30	0	646.95	0.106			+	48931	VVEEEENKYKV	11	86	683.3500776301611	1364.685602327122	2	682.8948974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVEEEENKYKV_	REV__ENSG00000052126|ENST00000429027|PLEKHA5;REV__nc|ENSG00000052126|Q9HAU0-4|PLEKHA5;REV__nc|ENSG00000052126|Q9HAU0-8|PLEKHA5	35.15202426646627	0.6210751305041943	4				NaN	NaN	0	NaN	11651	4084	15733
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15738	39.97	NaN	2898.2	30	0	299.12	0.034	+			12317	GDFVLKSGL	9	57	468.2636953545974	934.5128377759949	2	468.2640075683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GDFVLKSGL_	ENSG00000114491|ENST00000232607|UMPS	42.86426827375447	0.38666266728046506	4				NaN	NaN	0	NaN	11652	4084	15733
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15750	39.996	NaN	3086.2	30	0	234.81	0.214			+	41291	SVLLGLQQL	9	55	485.800260013999	969.585967094798	2	485.80029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVLLGLQQL_	REV__nc|ENSG00000090659|Q9NNX6-7|CD209;REV__nc|ENSG00000090659|Q9NNX6-8|CD209	67.49366992349736	0.1516260258713357	4				NaN	NaN	0	NaN	11661	4087	15749
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15751	40	NaN	2899.3	30	0	389.07	0.035				-1	 	0	67	336.53407897071105	1006.5804075123332	3	336.5342102050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11662	4087	15749
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15762	40.025	NaN	3480.5	30	0	397.43	0.144	+			12543	GEGEGRVGIIL	11	69	550.3090700979881	1098.603587262776	2	550.3093872070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEGEGRVGIIL_	CFTR|p.G1208Afs*3|1|0.3|ENSG00000001626|chr7:117627672-117627672|G/-|frameshift_variant;CFTR|p.L1258Ffs*7|1|0.26|ENSG00000001626|chr7:117642487-117642488|-/T|frameshift_variant;CFTR|p.S1297Lfs*31|1|0.28|ENSG00000001626|chr7:117652852-117652852|T/-|frameshift_variant;ENSG00000001626|ENST00000003084|CFTR;nc|ENSG00000001626|P13569-2|CFTR	41.080066990542036	0.5431644350485484	4				NaN	NaN	0	NaN	11670	4090	15761
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15774	40.052	NaN	2726.4	30	0	215.63	0.214			+	-1	LMEQHFVP	8	69	508.74728761995215	1015.4800223067043	2	508.7469482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LM(Oxidation (M))EQHFVP_	REV__ENSG00000007171|ENST00000313735|NOS2;REV__ENSG00000089250|ENST00000317775|NOS1;REV__nc|ENSG00000007171|P35228-2|NOS2;REV__nc|ENSG00000089250|P29475-2|NOS1;REV__nc|ENSG00000089250|P29475-3|NOS1;REV__nc|ENSG00000089250|P29475-5|NOS1;REV__NOS1|p.L911Qfs*6|1|0.04|ENSG00000089250|chr12:117247436-117247439|CCCA/-|frameshift_variant;REV__NOS2|p.A650Pfs*53|1|0.21|ENSG00000007171|chr17:27769063-27769063|C/-|frameshift_variant;REV__NOS2|p.Y709*|1|0.33|ENSG00000007171|chr17:27767745-27767745|G/-|frameshift_variant	50.0245360154114	0.5941082100236891	4				NaN	NaN	0	NaN	11679	4093	15773
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15775	40.056	NaN	2210.4	30	0	296.68	0.106	+			33192	REVVETPLL	9	56	528.3085647935774	1054.6025766539547	2	528.3089599609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_REVVETPLL_	ENSG00000161057|ENST00000292644|PSMC2;nc|ENSG00000161057|P35998-2|PSMC2;PSMC2|p.A269Pfs*34|1|0.07|ENSG00000161057|chr7:103366117-103366117|A/-|frameshift_variant	51.19269402634007	0.2889735674168909	4				NaN	NaN	0	NaN	11680	4093	15773
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15776	40.058	NaN	4373.5	30	0	506.22	0.04	+			18160	ILQEVEDIYFP	11	82	683.3500776301611	1364.685602327122	2	683.3488159179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ILQEVEDIYFP_	tr|U7T0G1|U7T0G1_FUSNUS1motifdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00806PE=4SV=1	29.170058357718403	0.683821074385409	4				NaN	NaN	0	NaN	11681	4093	15773
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15787	40.084	NaN	3444.9	30	0	748.6	0.214	+			25362	LPGALAAQEV	10	54	484.7743339493891	967.5341149655782	2	484.77362060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LPGALAAQEV_	ENSG00000173762|ENST00000312648|CD7;ENST00000581744.1_1_17:80274441-80275395:-|nuORF	51.33545320467046	0.4446945571623749	4				NaN	NaN	0	NaN	11689	4096	15786
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15788	40.087	NaN	2485.7	30	0	210.3	0.106	+			35244	SALGYLHSL	9	55	480.7606201171875	NaN	0	480.7606201171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SALGYLHSL_	ENSG00000118515|ENST00000367858|SGK1;ENST00000367855.7_1_6:134492115-134495951:-|nuORF;ENST00000474427.6_1_6:134493798-134493948:-|nuORF;ENST00000477460.6_1_6:134491408-134493948:-|nuORF;ENST00000524764.1_1_6:134493798-134494280:-|nuORF;nc|ENSG00000118515|O00141-3|SGK1;nc|ENSG00000118515|O00141-4|SGK1;nc|ENSG00000118515|O00141-5|SGK1;nc|ENSG00000118515|O00141|SGK1	47.657333605630114	0.2228375344433429	4				NaN	NaN	0	NaN	11690	4096	15786
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15789	40.089	NaN	1734	30	0	202.6	0.035	+			29958	PNIFFTIK	8	51	490.28414932008747	NaN	0	490.2807922363281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PNIFFTIK_	ENSG00000135317|ENST00000314673|SNX14;ENST00000508980.5_1_6:86270935-86284080:-|nuORF;nc|ENSG00000135317|Q9Y5W7-2|SNX14;nc|ENSG00000135317|Q9Y5W7-3|SNX14;nc|ENSG00000135317|Q9Y5W7-4|SNX14;SNX14|p.F173Lfs*5|3|0.42|ENSG00000135317|chr6:85565362-85565362|A/-|frameshift_variant	26.79610172149135	1.7418937515398478	4				NaN	NaN	0	NaN	11691	4096	15786
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15802	40.116	NaN	10142	30	0	1989.6	0.214	+			49934	VYVKDLSSF	9	69	529.2819432769476	1056.549333620695	2	529.2822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYVKDLSSF_	ENSG00000101350|ENST00000375712|KIF3B;KIF3B-TOX2|1|fusion;KIF3B-TOX2|2|fusion	90.60085204095205	0.06317133949006545	4				NaN	NaN	0	NaN	11701	4099	15801
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15803	40.12	NaN	2066.6	30	0	347.74	0.039			+	50573	YCAKIRKFCAT	11	49	652.3357262547668	1302.6568995763334	2	652.334716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YCAKIRKFCAT_	REV__HERVH-int_dup3527|chrX:4542813-4545870:-|8.094520876636611|0.0139942278604804|9.18|476.0|25|1|sense	19.996771675451527	0.7768568223548057	4				NaN	NaN	0	NaN	11702	4099	15801
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15826	40.173	NaN	2295.5	30	0	229.52	0.214			+	27089	MALSDNPH	8	54	442.7006616179635	883.386770302727	2	442.7003479003906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MALSDNPH_	REV__ENSG00000131899|ENST00000316843|LLGL1	40.5726180659479	0.6527593143185008	4				NaN	NaN	0	NaN	11719	4105	15825
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15827	40.176	NaN	1489.9	30	0	146.59	0.036	+			6606	AYQDRLAYL	9	56	556.7909982596275	1111.5674435860549	2	556.7906494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AYQDRLAYL_	ENSG00000140575|ENST00000268182|IQGAP1;ENST00000558003.1_1_15:91016937-91017036:+|nuORF;IQGAP1|p.N941Ifs*8|1|0.43|ENSG00000140575|chr15:90476693-90476693|A/-|frameshift_variant;IQGAP1|p.S1529Afs*10|1|0.15|ENSG00000140575|chr15:90492665-90492665|A/-|frameshift_variant	56.632244143249146	0.24168844994051353	4				NaN	NaN	0	NaN	11720	4105	15825
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15839	40.202	NaN	2497.7	30	0	340.01	0.144	+			34866	RYTIQLTTL	9	56	554.8220340216858	1107.6295151101715	2	554.8214721679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RYTIQLTTL_	ENSG00000162804|ENST00000310397|SNED1;ENST00000466618.1_1_2:242002912-242027813:+|nuORF;nc|ENSG00000162804|Q8TER0-3|SNED1;nc|ENSG00000162804|Q8TER0-4|SNED1;nc|ENSG00000162804|Q8TER0-5|SNED1;SNED1|p.R1289Gfs*59|1|0.09|ENSG00000162804|chr2:241073313-241073313|C/-|frameshift_variant	37.81151784470057	0.4459294069877048	4				NaN	NaN	0	NaN	11729	4108	15838
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15848	40.225	NaN	3366.5	30	0	783.17	0.145			+	6527	AYDGNLHTIT	10	64	368.8479683284599	NaN	0	368.8479919433594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AYDGNLHTIT_	REV__CDH4|p.R666H|1|0.12|ENSG00000179242|chr20:61928415-61928415|G/A|missense_variant	22.579656572578934	0.4201028297492154	4				NaN	NaN	0	NaN	11735	4111	15847
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15859	40.252	NaN	2490.7	30	0	374.49	0.214			+	10195	ETDKGLILR	9	63	522.8064899656234	1043.5984269980468	2	523.3076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ETDKGLILR_	REV__tr|U7SL52|U7SL52_FUSNUVWFAdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01984PE=4SV=1	32.81241826257853	0.4965981579233955	4				NaN	NaN	0	NaN	11743	4114	15858
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15860	40.256	NaN	5340.4	30	0	247.91	0.044			+	-1	FKWVCKQCRRW	11	94	827.4169669955696	1652.8193810579392	2	827.414306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_FKWVC(Carbamidomethyl (C))KQC(Carbamidomethyl (C))RRW_	REV__ENSG00000162975|ENST00000295082|KCNF1	2.718429308559148	0.8743795408415183	4				NaN	NaN	0	NaN	11744	4114	15858
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15878	40.3	NaN	2347.8	30	0	214.92	0.144	+			28326	NEFVHINNL	9	69	550.2803006374571	NaN	0	550.2802734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NEFVHINNL_	ENSG00000119414|ENST00000373547|PPP6C;nc|ENSG00000119414|O00743-2|PPP6C;nc|ENSG00000119414|O00743-3|PPP6C	58.22992032128504	0.15686832049467786	4				NaN	NaN	0	NaN	11756	4120	15877
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15895	40.344	NaN	2691.4	30	0	302.73	0.143				-1	 	0	68	336.53407897071105	1006.5804075123332	3	336.5341491699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11767	4126	15894
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15905	40.368	NaN	3104.3	30	0	359.29	0.145			+	33540	RLDDYNPINIG	11	65	645.3271961617714	NaN	0	645.3271484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RLDDYNPINIG_	REV__ENSG00000254986|ENST00000531863|DPP3;REV__ENST00000526250.5_1_11:66259118-66263112:+|nuORF;REV__nc|ENSG00000254986|Q9NY33-4|DPP3	17.468008924990375	0.456735970842152	4				NaN	NaN	0	NaN	11774	4129	15904
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15917	40.395	NaN	4796.9	30	0	517.6	0.213			+	31289	QIEEFDLAKR	10	72	624.8330621002672	1247.6515712673342	2	625.3353881835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QIEEFDLAKR_	REV__ENSG00000113211|ENST00000231136|PCDHB6;REV__PCDHB6|p.L301P|1|0.28|ENSG00000113211|chr5:141151159-141151159|T/C|missense_variant	31.634271133179894	0.6214930414500597	4				NaN	NaN	0	NaN	11783	4132	15916
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15918	40.399	NaN	1703.9	30	0	160.13	0.034				-1	CNSPPYLL	8	47	482.23405045669466	962.4535479801893	2	482.2337341308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_C(Carbamidomethyl (C))NSPPYLL_	ENSG00000104973|ENST00000312865|MED25;MED25|p.A202Gfs*197|1|0.36|ENSG00000104973|chr19:49829855-49829856|-/C|frameshift_variant;MED25|p.P201Rfs*13|3|0.22|ENSG00000104973|chr19:49829856-49829856|C/-|frameshift_variant;nc|ENSG00000104973|Q71SY5-4|MED25;nc|ENSG00000104973|Q71SY5-5|MED25	42.47446043378293	0.6409579893742323	4				NaN	NaN	0	NaN	11784	4132	15916
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15938	40.446	NaN	4393	30	0	1672	0.138				-1	 	0	71	309.18082671023546	308.1735502436355	1	309.180908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	11798	4138	15937
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15961	40.5	NaN	4304.8	30	0	2131.4	0.143	+			44093	TPTPRETST	9	49	495.24751931168913	988.4804856901783	2	495.24822998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TPTPRETST_	ENSG00000181143|ENST00000397910|MUC16;MUC16|p.F10843Sfs*11|1|0.22|ENSG00000181143|chr19:8938427-8938427|A/-|frameshift_variant;MUC16|p.N9430Tfs*13|1|0.14|ENSG00000181143|chr19:8948481-8948481|T/-|frameshift_variant	35.15202426646627	0.4747332964206883	4				NaN	NaN	0	NaN	11815	4144	15960
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15979	40.545	NaN	3603.7	30	0	645.37	0.144	+			47130	VLPKLYVKL	9	62	536.8606257350177	1071.7066985368353	2	536.85986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VLPKLYVKL_	ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;ENST00000465478.1_1_8:93156318-93156576:-|nuORF;ENST00000471178.2_1_19:35024355-35024547:-|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11	47.91560031466742	0.327412564698279	4				NaN	NaN	0	NaN	11827	4150	15978
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	15999	40.596	NaN	4523.4	30	0	442.88	0.145			+	33496	RKIKKLSETFD	11	70	682.89748397808	1363.78041502296	2	682.8958740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RKIKKLSETFD_	REV__ENSG00000021574|ENST00000315285|SPAST;REV__nc|ENSG00000021574|Q9UBP0-2|SPAST;REV__nc|ENSG00000021574|Q9UBP0-3|SPAST;REV__nc|ENSG00000021574|Q9UBP0-4|SPAST	21.68575002086885	0.7623253651248338	4				NaN	NaN	0	NaN	11841	4156	15998
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16010	40.621	NaN	3318.3	30	0	325.24	0.215	+			6801	CGDFSRAI	8	65	434.70224356344124	NaN	0	434.7025451660156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CGDFSRAI_	ENSG00000092470|ENST00000263795|WDR76;WDR76|p.R386H|1|0.28|ENSG00000092470|chr15:43851211-43851211|G/A|missense_variant	47.91560031466742	1.7418937515398478	4				NaN	NaN	0	NaN	11849	4159	16009
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16011	40.625	NaN	2860.7	30	0	346.81	0.036	+			33343	RHARAPGPVF	10	61	554.3099975585938	NaN	0	554.3099975585938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RHARAPGPVF_	ENST00000592937.1_1_19:2476862-2477408:+|nuORF	30.503639358989545	0.4000169810673414	4				NaN	NaN	0	NaN	11850	4159	16009
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16070	40.781	NaN	3541.1	30	0	282.14	0.213			+	-1	MLCCTTQRKF	10	70	623.7921026515002	NaN	0	623.7926635742188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))LCCTTQRKF_	REV__ENST00000368178.3_1_1:157738776-157739058:-|nuORF	34.172542307311794	0.38797011891751465	4				NaN	NaN	0	NaN	11888	4180	16069
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16071	40.785	NaN	2076.5	30	0	300.65	0.035	+			2997	ASFDKAKLK	9	61	336.5342593352082	NaN	0	336.5343322753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASFDKAKLK_	ENSG00000034510|ENST00000233143|TMSB10	21.9598887501803	0.3626577482100488	4				NaN	NaN	0	NaN	11889	4180	16069
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16081	40.808	NaN	7258.7	30	0	331.99	0.149			+	-1	FKWVCKQCRRW	11	108	827.4129919752082	NaN	0	827.4144897460938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_FKWVC(Carbamidomethyl (C))KQC(Carbamidomethyl (C))RRW_	REV__ENSG00000162975|ENST00000295082|KCNF1	9.705651100619752	0.456735970842152	4				NaN	NaN	0	NaN	11896	4183	16080
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16114	40.98	NaN	1881.5	30	0	124.12	0.214			+	36064	SEIVSAIKL	9	52	480.29224141238825	958.5699298915765	2	480.29193115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEIVSAIKL_	REV__ENSG00000204851|ENST00000599531|PNMA8B	67.49366992349736	0.1516260258713357	4				NaN	NaN	0	NaN	11920	4192	16113
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16115	40.984	NaN	2754	30	0	317.01	0.106			+	-1	CRAPILCDL	9	56	530.7673192488614	1059.5200855645228	2	530.7680053710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_CRAPILC(Carbamidomethyl (C))DL_	REV__ENST00000524227.5_1_8:41525962-41555361:-|nuORF	58.78195531508484	0.22376836668196862	4				NaN	NaN	0	NaN	11921	4192	16113
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16116	40.986	NaN	2072.1	30	0	162.19	0.106			+	25801	LSAVNEILL	9	51	486.29210908373415	970.5696652342683	2	486.2918701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSAVNEILL_	REV__ENSG00000233276|ENST00000419783|GPX1;REV__ENST00000388829.3_1_X:13397321-13397372:-|nuORF;REV__ENST00000419783.1_2_3:49395567-49395990:-|nuORF;REV__GPX1|p.A122Gfs*?|1|0.15|ENSG00000233276|chr3:49357635-49357636|-/C|frameshift_variant;REV__nc|ENSG00000233276|P07203-2|GPX1	60.11826168202944	0.21262886028301267	4				NaN	NaN	0	NaN	11922	4192	16113
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16117	40.988	NaN	3314.4	30	0	281.56	0.106			+	11774	FSLNIAELYN	10	63	592.3036948275392	1182.5928367218783	2	592.3038330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FSLNIAELYN_	REV__DEPDC5|p.C416*|1|0.04|ENSG00000100150|chr22:31806152-31806152|T/-|frameshift_variant;REV__DEPDC5|p.G304V|1|0.31|ENSG00000100150|chr22:31798621-31798621|G/T|missense_variant;REV__ENSG00000100150|ENST00000651528|DEPDC5;REV__nc|ENSG00000100150|O75140-1|DEPDC5;REV__nc|ENSG00000100150|O75140-2|DEPDC5;REV__nc|ENSG00000100150|O75140-4|DEPDC5;REV__nc|ENSG00000100150|O75140-5|DEPDC5;REV__nc|ENSG00000100150|O75140-6|DEPDC5;REV__nc|ENSG00000100150|O75140-8|DEPDC5;REV__nc|ENSG00000100150|O75140-9|DEPDC5	35.15202426646627	0.5927656479315102	4				NaN	NaN	0	NaN	11923	4192	16113
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16118	40.989	NaN	2488.9	30	0	356.15	0.106	+			11950	FVKDSGQVI	9	66	496.77462062139597	991.534688309592	2	496.77423095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FVKDSGQVI_	ENSG00000196935|ENST00000355086|SRGAP1;SRGAP1|p.F541Sfs*40|1|0.09|ENSG00000196935|chr12:64095145-64095145|T/-|frameshift_variant;SRGAP1|p.P856Lfs*3|1|0.56|ENSG00000196935|chr12:64127883-64127883|C/-|frameshift_variant	42.86426827375447	0.38666266728046506	4				NaN	NaN	0	NaN	11924	4192	16113
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16119	40.991	NaN	4915.2	30	0	310.18	0.106			+	20956	KKDQTLRYLSL	11	80	682.897942557062	1363.781332180924	2	682.8971557617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KKDQTLRYLSL_	REV__ENSG00000132434|ENST00000254770|LANCL2;REV__ENST00000452107.6_1_7:55447520-55499010:+|nuORF;REV__ENST00000476479.1_1_7:55479080-55499010:+|nuORF	31.634271133179894	0.6579734920221648	4				NaN	NaN	0	NaN	11925	4192	16113
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16120	40.993	NaN	4077.3	30	0	274.34	0.042	+			33518	RKRRFQLYRSM	11	83	770.9340209960938	NaN	0	770.9340209960938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RKRRFQLYRSM_	ENSG00000136206|ENST00000693451|SPDYE1;ENSG00000173678|ENST00000507450|SPDYE2B;ENSG00000205238|ENST00000691607|SPDYE2;nc|ENSG00000136206|Q8NFV5|SPDYE1;nc|ENSG00000205238|Q495Y8-2|SPDYE2	9.182911543092327	0.456735970842152	4				NaN	NaN	0	NaN	11926	4192	16113
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16137	41.038	NaN	2212.3	30	0	345.56	0.144				-1	INCHGGFLV	9	45	508.75374273265646	1015.492932532113	2	508.7537841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_INC(Carbamidomethyl (C))HGGFLV_	tr|U7SZX8|U7SZX8_FUSNUtRNAmodificationGTPaseMnmEOS=FusobacteriumnucleatumCTI-5OX=1316586GN=mnmEPE=3SV=1	20.481830146152948	0.6112419832031293	4				NaN	NaN	0	NaN	11937	4198	16136
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16153	41.083	NaN	2571.3	30	0	398.15	0.214				-1	VSRMGMVY	8	55	479.7268831801074	NaN	0	479.7264404296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_VSRMGM(Oxidation (M))VY_	DNAH8|p.D4227Afs*7|1|0.04|ENSG00000124721|chr6:39008929-39008930|-/CAGTGTT|frameshift_variant;DNAH8|p.F2607Lfs*22|2|0.32|ENSG00000124721|chr6:38886999-38886999|T/-|frameshift_variant;DNAH8|p.F2835Lfs*10|1|0.14|ENSG00000124721|chr6:38899865-38899865|T/-|frameshift_variant;DNAH8|p.Q3444Rfs*16|1|0.31|ENSG00000124721|chr6:38926073-38926073|C/-|frameshift_variant;DNAH8|p.V3263Sfs*23|1|0.16|ENSG00000124721|chr6:38918047-38918048|-/A|frameshift_variant;DNAH8|p.V3263Sfs*28|1|0.47|ENSG00000124721|chr6:38918048-38918048|A/-|frameshift_variant;ENSG00000124721|ENST00000327475|DNAH8;nc|ENSG00000124721|Q96JB1-2|DNAH8;nc|ENSG00000124721|Q96JB1|DNAH8	31.954861631926434	1.7418937515398478	4				NaN	NaN	0	NaN	11947	4204	16152
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16154	41.087	NaN	3252.2	30	0	612.58	0.038			+	13087	GFSLGLVYVKD	11	56	599.3294892700848	1196.6444256069694	2	599.329345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GFSLGLVYVKD_	REV__sp|C0H677|UL298_HCMVAProteinUL29/UL28OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL29PE=1SV=1;REV__sp|P16847|UL28_HCMVAUncharacterizedproteinUL28OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL28PE=3SV=1;REV__sp|Q6SWA3|UL298_HCMVMProteinUL29/28OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL29PE=3SV=2	28.081489160057373	0.6952392775027776	4				NaN	NaN	0	NaN	11948	4204	16152
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16166	41.112	NaN	3530.7	30	0	234.83	0.145	+			31264	QHRIPLELCLT	11	81	661.8650602346412	1321.7155675360823	2	661.86376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QHRIPLELCLT_	ENSG00000168803|ENST00000562188|ADAL;nc|ENSG00000168803|Q6DHV7-3|ADAL	25.57405402267927	0.7215402271931856	4				NaN	NaN	0	NaN	11957	4207	16165
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16173	41.132	NaN	3142.2	30	0	239.51	0.214	+			49517	VYAALQRQLL	10	71	587.8510569742526	1173.6875610153052	2	587.8510131835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYAALQRQLL_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	49.44154591367651	0.46214596422418036	4				NaN	NaN	0	NaN	11961	4210	16172
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16174	41.136	NaN	3464.4	30	0	882.71	0.106			+	6528	AYDGNLHTIT	10	70	368.8479683284599	NaN	0	368.8479919433594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AYDGNLHTIT_	REV__CDH4|p.R666H|1|0.12|ENSG00000179242|chr20:61928415-61928415|G/A|missense_variant	32.75053402867276	0.3926392905881664	4				NaN	NaN	0	NaN	11962	4210	16172
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16175	41.138	NaN	2764.7	30	0	391.28	0.106				-1	ASTKKVVMK	9	56	336.5342593352082	NaN	0	336.53436279296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_ASTKKVVM(Oxidation (M))K_	CFAP47|p.F1567Vfs*4|1|0.31|ENSG00000165164|chrX:36098829-36098830|-/G|frameshift_variant;CFAP47|p.H2345Afs*15|1|0.09|ENSG00000165164|chrX:36236809-36236810|-/A|frameshift_variant;CFAP47|p.K734Nfs*6|1|0.13|ENSG00000165164|chrX:35971909-35971909|A/-|frameshift_variant;CFAP47|p.P2326Tfs*34|1|0.26|ENSG00000165164|chrX:36236751-36236752|-/A|frameshift_variant;ENSG00000165164|ENST00000378653|CFAP47;nc|ENSG00000165164|Q6ZTR5-1|CFAP47;nc|ENSG00000165164|Q6ZTR5-2|CFAP47;nc|ENSG00000165164|Q6ZTR5-6|CFAP47	25.57405402267927	0.3484490411150625	4				NaN	NaN	0	NaN	11963	4210	16172
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16176	41.139	NaN	1802.2	30	0	287.69	0.035	+			27034	LYVIGGNHF	9	47	510.26923838573697	1018.523923838274	2	510.2676086425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LYVIGGNHF_	ENSG00000003096|ENST00000540167|KLHL13;ENSG00000198642|ENST00000359039|KLHL9;KLHL13|p.Y595Ifs*9|1|0.07|ENSG00000003096|chrX:117899094-117899094|C/-|frameshift_variant;nc|ENSG00000003096|Q9P2N7-2|KLHL13;nc|ENSG00000003096|Q9P2N7-4|KLHL13;nc|ENSG00000003096|Q9P2N7-5|KLHL13;nc|ENSG00000003096|Q9P2N7|KLHL13	60.29395666154354	0.21116425950210296	4				NaN	NaN	0	NaN	11964	4210	16172
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16190	41.169	NaN	12182	30	0	1334.5	0.214	+			15479	GVAFIFNQK	9	70	512.2850021899809	1022.5554514467618	2	512.2846069335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVAFIFNQK_	ENSG00000133816|ENST00000683283|MICAL2;ENSG00000243156|ENST00000441493|MICAL3;ENST00000530691.5_1_11:12229562-12281716:+|nuORF;MICAL2|p.E821Kfs*48|1|0.07|ENSG00000133816|chr11:12242336-12242337|AG/-|frameshift_variant;MICAL3|p.A1313Lfs*17|1|0.24|ENSG00000243156|chr22:17818727-17818727|G/-|frameshift_variant;MICAL3|p.R1499Gfs*106|7|0.44|ENSG00000243156|chr22:17818166-17818166|G/-|frameshift_variant;MICAL3|p.R1706Afs*24|1|0.3|ENSG00000243156|chr22:17817545-17817545|G/-|frameshift_variant;nc|ENSG00000133816|O94851-2|MICAL2;nc|ENSG00000133816|O94851-3|MICAL2;nc|ENSG00000133816|O94851-4|MICAL2;nc|ENSG00000133816|O94851-5|MICAL2;nc|ENSG00000133816|O94851-6|MICAL2;nc|ENSG00000133816|O94851|MICAL2;nc|ENSG00000243156|Q7RTP6-2|MICAL3;nc|ENSG00000243156|Q7RTP6-3|MICAL3;nc|ENSG00000243156|Q7RTP6-4|MICAL3;nc|ENSG00000243156|Q7RTP6-5|MICAL3	133.4690685054315	0.013543987435668854	4				NaN	NaN	0	NaN	11975	4213	16189
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16191	41.172	NaN	2595.1	30	0	530.61	0.106			+	2587	AQFRKAQL	8	60	481.2819922167022	960.5494315002044	2	481.2813415527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AQFRKAQL_	REV__ENSG00000076555|ENST00000338432|ACACB;REV__nc|ENSG00000076555|O00763-2|ACACB;REV__nc|ENSG00000076555|O00763-3|ACACB	50.0245360154114	0.5941082100236891	4				NaN	NaN	0	NaN	11976	4213	16189
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16192	41.174	NaN	6143.9	30	0	382.9	0.044			+	-1	CWRRSRYRRSQ	11	97	826.9153018189841	1651.816050704768	2	826.9141845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))C(Carbamidomethyl (C))WRRSRYRRSQ_	REV__ENST00000327026.7_1_17:80136426-80141741:-|nuORF	2.718429308559148	0.8743795408415183	4				NaN	NaN	0	NaN	11977	4213	16189
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16205	41.202	NaN	2626	30	0	377.5	0.144			+	41956	SVVVFFIMY	9	63	552.7919739170609	1103.5693949009217	2	553.2942504882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVVVFFIMY_	REV__ENSG00000136546|ENST00000643258|SCN7A;REV__SCN7A|p.D959Lfs*11|1|0.11|ENSG00000136546|chr2:166423411-166423412|-/AA|frameshift_variant;REV__SCN7A|p.Y1475Ifs*11|1|0.43|ENSG00000136546|chr2:166406206-166406206|A/-|frameshift_variant	37.81151784470057	0.4459294069877048	4				NaN	NaN	0	NaN	11987	4216	16204
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16228	41.266	NaN	2726.9	30	0	440.71	0.144			+	-1	ADHVPCPNM	9	53	528.7144238689998	1055.4142948047995	2	528.7152099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_ADHVPC(Carbamidomethyl (C))PNM(Oxidation (M))_	REV__ENSG00000204099|ENST00000407683|NEU4;REV__nc|ENSG00000204099|Q8WWR8-2|NEU4;REV__nc|ENSG00000204099|Q8WWR8-3|NEU4;REV__NEU4|p.W274Lfs*51|1|0.24|ENSG00000204099|chr2:241816407-241816408|-/CTGCC|frameshift_variant	31.954861631926434	0.5046124803899898	4				NaN	NaN	0	NaN	12001	4225	16227
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16235	41.284	NaN	1548.9	30	0	119.84	0.143	+			6907	CLVAMVVKL	9	43	488.2887680789175	NaN	0	488.2886047363281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CLVAMVVKL_	ENSG00000119285|ENST00000366582|HEATR1;HEATR1|p.I1897V|1|0.29|ENSG00000119285|chr1:236555616-236555616|T/C|missense_variant	50.0245360154114	0.20652386741182333	4				NaN	NaN	0	NaN	12005	4228	16234
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16253	41.341	NaN	4501.2	30	0	344.22	0.211	+			27342	MIHLRVSLLWP	11	84	682.897942557062	1363.781332180924	2	683.39794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MIHLRVSLLWP_	ENST00000542452.1_1_11:73727738-73744892:-|nuORF	25.57405402267927	0.7215402271931856	4				NaN	NaN	0	NaN	12014	4237	16252
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16254	41.345	NaN	5878.8	30	0	338.34	0.044			+	-1	CRRRKRWCSFC	11	87	836.3977661132812	NaN	0	836.3977661132812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	3 Carbamidomethyl (C)	_C(Carbamidomethyl (C))RRRKRWC(Carbamidomethyl (C))SFC(Carbamidomethyl (C))_	REV__MER49_dup1305|chr21:41210187-41211078:+|1.209497246225798|0.4412608656295442|1.45|483.0|55|3|anti-sense	5.921104790170933	0.456735970842152	4				NaN	NaN	0	NaN	12015	4237	16252
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16275	41.395	NaN	1678.9	30	0	288.4	0.144			+	26033	LSLGSTYGLY	10	49	537.2795677703733	1072.5445826075465	2	537.2806396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSLGSTYGLY_	REV__ENSG00000017483|ENST00000620913|SLC38A5;REV__ENSG00000134294|ENST00000256689|SLC38A2;REV__ENST00000552414.1_1_12:46758372-46758504:-|nuORF;REV__nc|ENSG00000017483|Q8WUX1-2|SLC38A5;REV__nc|ENSG00000134294|Q96QD8-2|SLC38A2;REV__SLC38A2|p.F332Cfs*28|1|0.09|ENSG00000134294|chr12:46363785-46363786|-/CAAAAACAAAAAC|frameshift_variant;REV__SLC38A5|p.F267Lfs*54|1|0.17|ENSG00000017483|chrX:48461768-48461768|A/-|frameshift_variant	37.15910966729921	0.575322462179216	4				NaN	NaN	0	NaN	12030	4243	16274
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16283	41.415	NaN	2870.7	30	0	309.59	0.144			+	1477	AFLTNFALY	9	56	530.2776382930002	1058.5407236528004	2	530.2783813476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AFLTNFALY_	REV__nc|ENSG00000187720|Q6ZMP0-3|THSD4	50.0245360154114	0.3026755932229825	4				NaN	NaN	0	NaN	12035	4246	16282
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16293	41.44	NaN	3517.5	30	0	1218.2	0.145			+	26711	LVKAYTFIDQ	10	54	599.3294892700848	1196.6444256069694	2	599.329833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LVKAYTFIDQ_	REV__ENSG00000155465|ENST00000674313|SLC7A7	26.69291269510374	0.6618461711292317	4				NaN	NaN	0	NaN	12042	4249	16292
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16299	41.458	NaN	4940.9	30	0	373.88	0.213			+	7360	DDEAEAKFIY	10	62	600.7738339876325	1199.533115042065	2	600.7739868164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DDEAEAKFIY_	REV__ENSG00000147180|ENST00000674551|ZNF711;REV__nc|ENSG00000147180|Q9Y462-2|ZNF711;REV__nc|ENSG00000147180|Q9Y462|ZNF711;REV__ZNF711|p.F514Lfs*5|1|0.07|ENSG00000147180|chrX:85271084-85271085|TC/-|frameshift_variant;REV__ZNF711|p.H694Tfs*14|3|0.25|ENSG00000147180|chrX:85271614-85271615|-/A|frameshift_variant	39.252832667884924	0.5560298534376815	4				NaN	NaN	0	NaN	12045	4252	16298
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16300	41.462	NaN	6464.8	30	0	984.55	0.037			+	-1	ESVIDILECV	10	72	588.795299001402	1175.5760450696039	2	588.7946166992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_ESVIDILEC(Carbamidomethyl (C))V_	REV__ENSG00000166783|ENST00000396368|MARF1;REV__nc|ENSG00000166783|Q9Y4F3-3|MARF1;REV__nc|ENSG00000166783|Q9Y4F3-4|MARF1;REV__nc|ENSG00000166783|Q9Y4F3-5|MARF1	27.882242232435846	0.6521336255503853	4				NaN	NaN	0	NaN	12046	4252	16298
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16309	41.484	NaN	2304.7	30	0	347.06	0.214	+			44694	TTILYRLQ	8	65	336.5342593352082	NaN	0	336.534423828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTILYRLQ_	ENSG00000120805|ENST00000261636|ARL1;ENST00000549302.1_1_12:101799535-101801423:-|nuORF;nc|ENSG00000120805|P40616-2|ARL1	19.359975847455235	1.7418937515398478	4				NaN	NaN	0	NaN	12052	4255	16308
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16310	41.487	NaN	2963.4	30	0	291.2	0.106	+			28396	NENSLFKSL	9	60	526.2747010612418	1050.5348491892835	2	526.275634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NENSLFKSL_	CLTC|p.A1374*|1|0.05|ENSG00000141367|chr17:59683464-59683465|-/TA|frameshift_variant;ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000141367|Q00610-2|CLTC	77.53327743719008	0.1082147015697554	4				NaN	NaN	0	NaN	12053	4255	16308
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16311	41.489	NaN	1333.2	30	0	150.59	0.033			+	-1	MPGPPQGSG	9	44	422.1873779296875	NaN	0	422.1873779296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))PGPPQGSG_	REV__ENST00000562240.1_1_16:30066238-30075225:+|nuORF;REV__ENST00000575627.5_1_16:30064792-30075225:+|nuORF	38.80614096846853	0.28164298475537564	4				NaN	NaN	0	NaN	12054	4255	16308
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16321	41.512	NaN	12842	30	0	1897.9	0.214			+	10161	ESVIDILECVG	11	83	588.795299001402	1175.5760450696039	2	588.7949829101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ESVIDILECVG_	REV__ENSG00000166783|ENST00000396368|MARF1;REV__nc|ENSG00000166783|Q9Y4F3-3|MARF1;REV__nc|ENSG00000166783|Q9Y4F3-4|MARF1;REV__nc|ENSG00000166783|Q9Y4F3-5|MARF1	47.657333605630114	0.4531673460382624	4				NaN	NaN	0	NaN	12061	4258	16320
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16322	41.516	NaN	3249.6	30	0	281.4	0.035	+			15480	GVAFIFNQK	9	56	512.2850021899809	1022.5554514467618	2	512.28515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GVAFIFNQK_	ENSG00000133816|ENST00000683283|MICAL2;ENSG00000243156|ENST00000441493|MICAL3;ENST00000530691.5_1_11:12229562-12281716:+|nuORF;MICAL2|p.E821Kfs*48|1|0.07|ENSG00000133816|chr11:12242336-12242337|AG/-|frameshift_variant;MICAL3|p.A1313Lfs*17|1|0.24|ENSG00000243156|chr22:17818727-17818727|G/-|frameshift_variant;MICAL3|p.R1499Gfs*106|7|0.44|ENSG00000243156|chr22:17818166-17818166|G/-|frameshift_variant;MICAL3|p.R1706Afs*24|1|0.3|ENSG00000243156|chr22:17817545-17817545|G/-|frameshift_variant;nc|ENSG00000133816|O94851-2|MICAL2;nc|ENSG00000133816|O94851-3|MICAL2;nc|ENSG00000133816|O94851-4|MICAL2;nc|ENSG00000133816|O94851-5|MICAL2;nc|ENSG00000133816|O94851-6|MICAL2;nc|ENSG00000133816|O94851|MICAL2;nc|ENSG00000243156|Q7RTP6-2|MICAL3;nc|ENSG00000243156|Q7RTP6-3|MICAL3;nc|ENSG00000243156|Q7RTP6-4|MICAL3;nc|ENSG00000243156|Q7RTP6-5|MICAL3	85.35947970620816	0.07794846947388434	4				NaN	NaN	0	NaN	12062	4258	16320
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16344	41.568	NaN	2398.3	30	0	255.1	0.143			+	43672	TKAYNWLK	8	73	512.2850021899809	1022.5554514467618	2	513.2886962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TKAYNWLK_	REV__ENSG00000047578|ENST00000261588|KATNIP	30.503639358989545	0.7238069182250283	4				NaN	NaN	0	NaN	12078	4264	16343
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16354	41.593	NaN	2525.5	30	0	710.96	0.214				-1	 	0	58	399.69157403127053	797.3685951293411	2	399.6914367675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12085	4267	16353
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16355	41.597	NaN	6071	30	0	395.58	0.044			+	-1	FKWVCKQCRRW	11	88	827.4188842773438	NaN	0	827.4188842773438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_FKWVC(Carbamidomethyl (C))KQC(Carbamidomethyl (C))RRW_	REV__ENSG00000162975|ENST00000295082|KCNF1	5.55782384252955	0.456735970842152	4				NaN	NaN	0	NaN	12086	4267	16353
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16360	41.612	NaN	4730.9	30	0	526.73	0.144	+			29256	NYAQVFNKL	9	68	548.7933027748658	1095.5720526165314	2	548.7937622070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NYAQVFNKL_	ENSG00000136261|ENST00000258761|BZW2;ENST00000480517.5_1_7:16705068-16725727:+|nuORF;nc|ENSG00000136261|Q9Y6E2-2|BZW2	96.19043198914106	0.047412499214244314	4				NaN	NaN	0	NaN	12088	4270	16359
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16378	41.66	NaN	2369.2	30	0	209.66	0.144	+			46407	VENNLILKM	9	59	537.3052339921198	1072.5959150510396	2	537.3056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VENNLILKM_	ENSG00000140992|ENST00000342085|PDPK1;nc|ENSG00000140992|O15530-2|PDPK1;nc|ENSG00000140992|O15530-3|PDPK1;nc|ENSG00000140992|O15530-4|PDPK1	95.81516180277367	0.04847050768394289	4				NaN	NaN	0	NaN	12100	4276	16377
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16389	41.687	NaN	2817.4	30	0	317.37	0.214			+	8804	EEKNLEKEI	9	53	566.298490726483	1130.582428519766	2	566.29833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EEKNLEKEI_	REV__ENSG00000061987|ENST00000393630|MON2;REV__ENST00000547095.5_1_12:62864501-62986526:+|nuORF;REV__MON2|p.A1027Vfs*94|1|0.03|ENSG00000061987|chr12:62553043-62553044|-/TTCTTTTT|frameshift_variant;REV__MON2|p.T1274Qfs*3|1|0.36|ENSG00000061987|chr12:62560894-62560894|T/-|frameshift_variant;REV__MON2|p.V1435Afs*17|1|0.03|ENSG00000061987|chr12:62566430-62566431|-/CATCT|frameshift_variant;REV__nc|ENSG00000061987|Q7Z3U7-2|MON2;REV__nc|ENSG00000061987|Q7Z3U7-5|MON2;REV__nc|ENSG00000061987|Q7Z3U7-6|MON2	63.53385203322761	0.18415635464017938	4				NaN	NaN	0	NaN	12108	4279	16388
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16390	41.691	NaN	4036.6	30	0	347.63	0.04			+	43692	TKIEKNRLSYI	11	81	682.897942557062	1363.781332180924	2	682.8973388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TKIEKNRLSYI_	REV__ENSG00000189181|ENST00000342623|OR14I1	28.081489160057373	0.6952392775027776	4				NaN	NaN	0	NaN	12109	4279	16388
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16401	41.715	NaN	2824.5	30	0	690.48	0.214				-1	 	0	65	368.8478995181739	1103.5218691547218	3	368.8480529785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12117	4282	16400
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16402	41.718	NaN	2717.1	30	0	290.44	0.106			+	37095	SISLLISHEKQ	11	69	627.8561429516988	NaN	0	627.8558959960938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SISLLISHEKQ_	REV__ENSG00000196421|ENST00000636176|C20orf204	29.170058357718403	0.43541742044178583	4				NaN	NaN	0	NaN	12118	4282	16400
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16403	41.72	NaN	2171.5	30	0	218.45	0.106	+			23295	KYNANFVTF	9	61	552.2800791013282	1102.5456052694562	2	552.2796020507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KYNANFVTF_	ENSG00000173120|ENST00000529006|KDM2A;ENST00000527157.1_1_11:66888787-66947744:+|nuORF;KDM2A|p.G855Efs*24|2|0.34|ENSG00000173120|chr11:67250589-67250589|G/-|frameshift_variant;KDM2A|p.L300Cfs*10|1|0.4|ENSG00000173120|chr11:67219340-67219340|T/-|frameshift_variant;KDM2A|p.R834Vfs*3|1|0.38|ENSG00000173120|chr11:67250525-67250525|C/-|frameshift_variant;nc|ENSG00000173120|Q9Y2K7-3|KDM2A	32.81241826257853	0.4965981579233955	4				NaN	NaN	0	NaN	12119	4282	16400
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16404	41.722	NaN	1801	30	0	219.33	0.106	+			32441	QVILLLKP	8	43	462.3187156747262	922.6228784162524	2	462.3177490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QVILLLKP_	ENST00000519443.1_1_8:117778842-117782740:+|nuORF	19.359975847455235	0.7988239741663654	4				NaN	NaN	0	NaN	12120	4282	16400
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16405	41.724	NaN	1316.9	30	0	167.31	0.033				-1	VSIMLGTT	8	47	419.2237844386993	836.4330159441986	2	419.224365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_VSIM(Oxidation (M))LGTT_	ENSG00000168077|ENST00000301904|SCARA3;nc|ENSG00000168077|Q6AZY7-2|SCARA3	26.79610172149135	0.7524337208463756	4				NaN	NaN	0	NaN	12121	4282	16400
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16416	41.749	NaN	2058.6	30	0	189.21	0.143	+			15378	GTWVLIPFL	9	55	523.3057818828199	NaN	0	523.3051147460938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTWVLIPFL_	ENST00000397269.7_1_10:5948371-5948467:+|nuORF	35.200714571348534	0.2998460331538257	4				NaN	NaN	0	NaN	12129	4285	16415
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16431	41.806	NaN	4208.5	30	0	830.15	0.214			+	42848	TEFLGHIEL	9	63	529.77970295462	1057.54485297604	2	529.7794799804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEFLGHIEL_	REV__ADCY10|p.N1597Tfs*4|1|0.07|ENSG00000143199|chr1:167809721-167809721|T/-|frameshift_variant;REV__ADCY10|p.N743Tfs*33|1|0.32|ENSG00000143199|chr1:167854433-167854433|T/-|frameshift_variant;REV__ADCY10|p.P1022Sfs*2|1|0.28|ENSG00000143199|chr1:167837262-167837263|-/A|frameshift_variant;REV__ADCY10|p.W654*|1|0.29|ENSG00000143199|chr1:167856362-167856374|CTCCATAAATCTC/-|frameshift_variant;REV__ENSG00000143199|ENST00000367851|ADCY10;REV__nc|ENSG00000143199|Q96PN6-2|ADCY10	44.116797842482775	0.37197099687881774	4				NaN	NaN	0	NaN	12135	4294	16430
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16432	41.81	NaN	2040.3	30	0	153.62	0.035			+	-1	LFVRQSLC	8	57	511.7758432963571	NaN	0	511.7764892578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LFVRQSLC(Carbamidomethyl (C))_	REV__ENST00000361479.9_1_13:20207833-20207887:+|nuORF	37.028477286268924	1.7418937515398478	4				NaN	NaN	0	NaN	12136	4294	16430
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16439	41.827	NaN	2625.1	30	0	296.16	0.143	+			19005	IVVLHQADI	9	66	336.5342593352082	NaN	0	336.5342712402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IVVLHQADI_	ENST00000485801.1_1_3:132120486-132120636:+|nuORF	26.79610172149135	0.34227917631780574	4				NaN	NaN	0	NaN	12140	4297	16438
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16452	41.856	NaN	2732.5	30	0	327.58	0.145				-1	 	0	62	620.9985318081003	NaN	0	620.9983520507812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12150	4300	16451
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16460	41.878	NaN	2826.2	30	0	316.13	0.144	+			33864	RRKYNPTR	8	63	545.8131131349254	1089.6116733366507	2	546.3186645507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RRKYNPTR_	ENSG00000166987|ENST00000355673|MBD6	35.61828744233558	0.6843154725607303	4				NaN	NaN	0	NaN	12155	4303	16459
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16466	41.897	NaN	4042.1	30	0	447.97	0.145			+	-1	RVHDYASSVM	10	71	590.7762177589152	1179.5378825846303	2	590.77685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_RVHDYASSVM(Oxidation (M))_	REV__ENSG00000102882|ENST00000263025|MAPK3;REV__nc|ENSG00000102882|P27361-2|MAPK3;REV__nc|ENSG00000102882|P27361-3|MAPK3	28.081489160057373	0.6505064946289502	4				NaN	NaN	0	NaN	12158	4306	16465
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16475	41.92	NaN	1973.7	30	0	216.1	0.144				-1	 	0	68	543.3013162736305	542.2940398070305	1	545.310791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12164	4309	16474
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16487	41.959	NaN	1230.2	30	0	174.48	0.141			+	13181	GIAAVHRN	8	37	419.23894189510565	NaN	0	419.2383117675781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GIAAVHRN_	REV__ENSG00000241973|ENST00000255882|PI4KA;REV__ENST00000360806.9_2_22:21827645-21842641:-|nuORF;REV__ENST00000450651.5_1_22:21841260-21846319:-|nuORF;REV__ENST00000462210.1_1_22:21088329-21088754:-|nuORF;REV__ENST00000462560.6_1_22:21830876-21842641:-|nuORF;REV__ENST00000467443.5_1_22:21831964-21846319:-|nuORF;REV__nc|ENSG00000183506|A4QPH2-2|PI4KAP2;REV__nc|ENSG00000183506|A4QPH2-4|PI4KAP2;REV__nc|ENSG00000183506|A4QPH2|PI4KAP2;REV__nc|ENSG00000241973|P42356-2|PI4KA;REV__nc|ENSG00000290425|Q8N8J0|PI4KAP1	14.664097394203935	1.7418937515398478	4				NaN	NaN	0	NaN	12170	4315	16486
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16497	41.984	NaN	1419.2	30	0	122.16	0.214			+	41504	SVPLMLIR	8	44	464.7856515649077	NaN	0	464.7854919433594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVPLMLIR_	REV__WDR53|p.D52Efs*45|1|0.08|ENSG00000185798|chr3:196561320-196561321|-/AAATCCTAGAC|frameshift_variant	31.954861631926434	1.7418937515398478	4				NaN	NaN	0	NaN	12177	4318	16496
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16498	41.988	NaN	1038.8	30	0	132.4	0.106				-1	 	0	46	479.08930894470257	NaN	0	479.2842712402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12178	4318	16496
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16499	41.99	NaN	4802.5	30	0	378.91	0.044	+			50277	WRPRYRYYHWA	11	86	827.4155883789062	NaN	0	827.4155883789062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_WRPRYRYYHWA_	SLC12A6|p.F676Y|1|0.34|ENSG00000140199|chr15:34243989-34243989|A/T|missense_variant	2.92943323627438	0.456735970842152	4				NaN	NaN	0	NaN	12179	4318	16496
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16517	42.036	NaN	4838.9	30	0	414.32	0.144	+			12034	FYISPVNKL	9	71	540.8084353720338	1079.6023178108676	2	540.8082275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FYISPVNKL_	ENSG00000105778|ENST00000318709|AVL9;nc|ENSG00000105778|Q8NBF6-2|AVL9	74.25504064058377	0.12238981753128622	4				NaN	NaN	0	NaN	12191	4324	16516
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16526	42.06	NaN	3307.3	30	0	230.49	0.144			+	7557	DHTLQAYAF	9	57	533.253101257115	1064.4916495810298	2	533.7543334960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DHTLQAYAF_	REV__ENSG00000156675|ENST00000330843|RAB11FIP1;REV__ENST00000522774.1_1_8:37720415-37728147:-|nuORF;REV__ENST00000523182.5_1_8:37720415-37730726:-|nuORF;REV__nc|ENSG00000156675|Q6WKZ4-1|RAB11FIP1;REV__nc|ENSG00000156675|Q6WKZ4-3|RAB11FIP1	58.78195531508484	0.22376836668196862	4				NaN	NaN	0	NaN	12197	4327	16525
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16541	42.113	NaN	4899.8	30	0	307.22	0.146			+	31997	QRHDRRRLLSH	11	82	737.416579907889	NaN	0	737.4174194335938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QRHDRRRLLSH_	REV__ENST00000308278.12_1_17:635940-641136:+|nuORF	20.83715455343099	0.456735970842152	4				NaN	NaN	0	NaN	12203	4336	16540
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16555	42.155	NaN	4316.4	30	0	1116.9	0.214				-1	 	0	59	415.25356937490255	414.24629290830256	1	415.2538757324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12211	4342	16554
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16556	42.158	NaN	3305	30	0	908.15	0.037	+			11769	FSKSCHLPW	9	73	368.8478995181739	1103.5218691547218	3	368.8480224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FSKSCHLPW_	ENSG00000174697|ENST00000308868|LEP	23.04248740728303	0.5879033540491928	4				NaN	NaN	0	NaN	12212	4342	16554
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16567	42.193	NaN	2259.5	30	0	224.49	0.214	+			43289	TFKELANEF	9	63	549.7773527831179	NaN	0	549.7772827148438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TFKELANEF_	ENSG00000065361|ENST00000267101|ERBB3;ERBB3|p.R1080Vfs*22|1|0.14|ENSG00000065361|chr12:56101093-56101093|C/-|frameshift_variant;nc|ENSG00000065361|P21860-4|ERBB3;nc|ENSG00000065361|P21860-5|ERBB3	72.87924865735499	0.09578366712754152	4				NaN	NaN	0	NaN	12217	4348	16566
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16568	42.196	NaN	4499	30	0	370.52	0.044			+	-1	FYEWRKMHRRQ	11	88	826.9159545898438	NaN	0	826.9159545898438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_FYEWRKM(Oxidation (M))HRRQ_	REV__ENSG00000198734|ENST00000367797|F5;REV__F5|p.G1754Efs*13|1|0.41|ENSG00000198734|chr1:169529768-169529768|T/-|frameshift_variant;REV__F5|p.S1606Pfs*5|1|0.07|ENSG00000198734|chr1:169536662-169536663|-/CTGAAGTGGA|frameshift_variant	8.693696342081763	0.456735970842152	4				NaN	NaN	0	NaN	12218	4348	16566
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16577	42.218	NaN	4277.3	30	0	1120.1	0.147	+			43425	TGKPGVPV	8	70	754.4453116995836	753.4380352329836	1	754.4434204101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TGKPGVPV_	ENST00000469802.5_1_20:61464332-61467763:+|nuORF;ENST00000472880.1_1_20:61467424-61467763:+|nuORF	12.206847966760668	0.7875100812264838	4				NaN	NaN	0	NaN	12224	4351	16576
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16595	42.265	NaN	2727.3	30	0	273.97	0.211				-1	 	0	68	693.3916777806215	692.3844013140215	1	693.3905029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12236	4357	16594
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16596	42.268	NaN	2059.5	30	0	791.81	0.037	+			29624	PGASDHRPRH	10	46	565.2833836216962	NaN	0	565.2830200195312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PGASDHRPRH_	ENST00000326735.12_1_1:17316691-17319005:-|nuORF;ENST00000503552.1_1_1:17316691-17319005:-|nuORF	20.94693142431847	0.4201028297492154	4				NaN	NaN	0	NaN	12237	4357	16594
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16623	42.347	NaN	2765	30	0	540.98	0.143			+	-1	VCLSILLTI	9	52	516.3110225759734	1030.6074922187468	2	516.310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_VC(Carbamidomethyl (C))LSILLTI_	REV__nc|ENSG00000249730|P0C629|OR10J4	40.77816245573522	0.41113185337114944	4				NaN	NaN	0	NaN	12252	4369	16622
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16630	42.367	NaN	3685.7	30	0	228.2	0.148			+	-1	QRQRLWYICMN	11	77	784.38623046875	NaN	0	784.38623046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_QRQRLWYIC(Carbamidomethyl (C))MN_	REV__ENSG00000254126|ENST00000643224|CD8B2	14.137123925751023	0.456735970842152	4				NaN	NaN	0	NaN	12256	4372	16629
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16636	42.385	NaN	2163.3	30	0	210.77	0.144	+			6576	AYLEAIHNF	9	56	539.2716610347269	1076.5287691362537	2	539.2713012695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AYLEAIHNF_	ENSG00000042753|ENST00000263270|AP2S1	49.44154591367651	0.3095138337212152	4				NaN	NaN	0	NaN	12259	4375	16635
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16653	42.43	NaN	2390	30	0	201.46	0.145			+	-1	YIVGKNMIGM	10	56	579.2855975520056	NaN	0	579.2864379882812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_YIVGKNM(Oxidation (M))IGM(Oxidation (M))_	REV__ENSG00000143514|ENST00000343537|TP53BP2;REV__nc|ENSG00000143514|Q13625-2|TP53BP2;REV__nc|ENSG00000143514|Q13625|TP53BP2	30.503639358989545	0.4000169810673414	4				NaN	NaN	0	NaN	12270	4381	16652
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16658	42.446	NaN	6041.3	30	0	345.33	0.147			+	-1	CMYRFKEETFV	11	89	755.3471972660398	1508.6798415988794	2	755.3463745117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_C(Carbamidomethyl (C))MYRFKEETFV_	REV__ENSG00000174371|ENST00000366548|EXO1;REV__nc|ENSG00000174371|Q9UQ84-4|EXO1	17.468008924990375	0.788697330333842	4				NaN	NaN	0	NaN	12272	4384	16657
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16673	42.485	NaN	2983	30	0	299.53	0.138			+	14415	GTAPLVILSH	10	61	336.5342593352082	NaN	0	336.5343017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTAPLVILSH_	REV__ENST00000444374.1_1_9:92316696-92316852:+|nuORF	21.9598887501803	0.4201028297492154	4				NaN	NaN	0	NaN	12281	4390	16672
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16689	42.526	NaN	4839.6	30	0	736.51	0.144	+			14801	GTLDYILQR	9	63	539.798431948684	1077.5823109641678	2	539.7985229492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTLDYILQR_	ENSG00000140718|ENST00000471389|FTO	136.26810882979174	0.012230845423532208	4				NaN	NaN	0	NaN	12291	4396	16688
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16718	42.618	NaN	1635.3	30	0	196.46	0.141			+	706	AEAREGPD	8	52	422.6925283813722	NaN	0	422.69287109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEAREGPD_	REV__ENSG00000137877|ENST00000320955|SPTBN5;REV__SPTBN5|p.A3297Gfs*48|1|0.56|ENSG00000137877|chr15:41853672-41853673|-/C|frameshift_variant;REV__SPTBN5|p.G2751Afs*60|1|0.08|ENSG00000137877|chr15:41857685-41857685|C/-|frameshift_variant	33.51558372728122	1.7418937515398478	4				NaN	NaN	0	NaN	12305	4411	16717
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16726	42.639	NaN	1697	30	0	256.7	0.149	+			20898	KIRLKIRRLDD	11	49	475.97047919552085	NaN	0	475.9715270996094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KIRLKIRRLDD_	ENSG00000141252|ENST00000437048|VPS53;ENST00000575207.5_1_17:560762-617949:-|nuORF;nc|ENSG00000141252|Q5VIR6-1|VPS53;nc|ENSG00000141252|Q5VIR6-2|VPS53;nc|ENSG00000141252|Q5VIR6-3|VPS53;VPS53|p.I194Dfs*17|1|0.4|ENSG00000141252|chr17:653319-653320|-/C|frameshift_variant	6.320883175729509	0.456735970842152	4				NaN	NaN	0	NaN	12310	4414	16725
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16734	42.661	NaN	1401.2	30	0	105.07	0.214	+			41582	SVQGFFLNH	9	62	524.7643787837961	1047.5142046343922	2	524.7640991210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVQGFFLNH_	ENSG00000180011|ENST00000322342|PTGR3;nc|ENSG00000180011|Q8N4Q0-2|PTGR3	42.396135135203025	0.392153681582562	4				NaN	NaN	0	NaN	12315	4417	16733
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16735	42.665	NaN	1321.6	30	0	97.887	0.036	+			29511	PDNWVISIY	9	52	553.7797480350966	1105.5449431369932	2	553.7794799804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PDNWVISIY_	ENSG00000164961|ENST00000318410|WASHC5	40.77816245573522	0.41113185337114944	4				NaN	NaN	0	NaN	12316	4417	16733
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16742	42.683	NaN	1717.2	30	0	245.47	0.211			+	31433	QKPKRRRRRK	10	49	704.9645027551086	NaN	0	704.9645385742188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QKPKRRRRRK_	REV__ENSG00000132793|ENST00000373257|LPIN3;REV__LPIN3|p.G368Afs*52|1|0.31|ENSG00000132793|chr20:41350389-41350389|G/-|frameshift_variant;REV__LPIN3|p.K715Rfs*19|1|0.47|ENSG00000132793|chr20:41357981-41357981|C/-|frameshift_variant;REV__nc|ENSG00000132793|Q9BQK8-2|LPIN3	6.735540347417125	0.42010282974921537	4				NaN	NaN	0	NaN	12320	4420	16741
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16743	42.686	NaN	1539.3	30	0	129.21	0.106			+	18097	IKRRKNKRELS	11	63	714.4512329101562	NaN	0	714.4512329101562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IKRRKNKRELS_	REV__ENSG00000103994|ENST00000564754|ZNF106;REV__nc|ENSG00000103994|Q9H2Y7-2|ZNF106;REV__nc|ENSG00000103994|Q9H2Y7|ZNF106	11.635926663890343	0.456735970842152	4				NaN	NaN	0	NaN	12321	4420	16741
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16744	42.688	NaN	1667	30	0	92.899	0.043				-1	HYERCDVRRCR	11	72	803.8778686523438	NaN	0	803.8778686523438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_HYERC(Carbamidomethyl (C))DVRRC(Carbamidomethyl (C))R_	ENSG00000092140|ENST00000206595|G2E3	8.693696342081763	0.456735970842152	4				NaN	NaN	0	NaN	12322	4420	16741
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16750	42.703	NaN	2292.7	30	0	491.54	0.144	+			46788	VHINSMQTE	9	55	529.7509319025311	1057.487310871862	2	529.7514038085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VHINSMQTE_	BICC1|p.I566Nfs*44|1|0.3|ENSG00000122870|chr10:58799216-58799217|-/A|frameshift_variant;BICC1|p.I566Sfs*5|1|0.57|ENSG00000122870|chr10:58799217-58799217|A/-|frameshift_variant;ENSG00000122870|ENST00000373886|BICC1;nc|ENSG00000122870|Q9H694-2|BICC1	54.776311868738084	0.25715957988447635	4				NaN	NaN	0	NaN	12325	4423	16749
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16772	42.766	NaN	3309.8	30	0	195.91	0.146	+			33697	RPDQKRELRYL	11	82	737.416579907889	NaN	0	737.4160766601562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RPDQKRELRYL_	ENST00000395134.3_1_6:33257397-33257646:+|nuORF	15.333111300571575	0.456735970842152	4				NaN	NaN	0	NaN	12338	4432	16771
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16783	42.793	NaN	1194.9	30	0	82.19	0.142	+			12634	GEIIGVKVL	9	42	464.2969077798605	NaN	0	464.2969970703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEIIGVKVL_	ENSG00000180817|ENST00000373232|PPA1	62.107414245175825	0.1403307765918332	4				NaN	NaN	0	NaN	12346	4435	16782
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16793	42.818	NaN	3842.9	30	0	1892.5	0.144				-1	 	0	50	534.3122471454245	533.3049706788245	1	534.3125610351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12353	4438	16792
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16800	42.838	NaN	2465.6	30	0	365.44	0.144			+	7028	CSKLKVFLA	9	72	336.86811939985614	1007.5825287997684	3	336.86834716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CSKLKVFLA_	REV__CYLD|p.I702*|1|0.1|ENSG00000083799|chr16:50787844-50787844|A/-|frameshift_variant;REV__CYLD|p.N722Mfs*13|3|0.37|ENSG00000083799|chr16:50791608-50791608|A/-|frameshift_variant;REV__ENSG00000083799|ENST00000427738|CYLD;REV__ENST00000563629.1_1_16:50783909-50820919:+|nuORF;REV__ENST00000569891.5_1_16:50783609-50818363:+|nuORF;REV__nc|ENSG00000083799|Q9NQC7-2|CYLD	14.137123925751023	0.6112419832031292	4				NaN	NaN	0	NaN	12357	4441	16799
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16811	42.874	NaN	1712.6	30	0	241.33	0.144	+			14802	GTLDYILQR	9	51	539.799271846102	NaN	0	539.8002319335938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTLDYILQR_	ENSG00000140718|ENST00000471389|FTO	54.776311868738084	0.17377682019723872	4				NaN	NaN	0	NaN	12362	4447	16810
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16842	42.981	NaN	3114.9	30	0	487.15	0.214			+	30206	PSRAPSRN	8	48	442.7366755057696	NaN	0	442.73675537109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PSRAPSRN_	REV__ENSG00000188687|ENST00000394019|SLC4A5;REV__ENST00000451608.2_1_2:74452054-74542150:-|nuORF;REV__ENST00000483195.5_1_2:74452054-74512997:-|nuORF;REV__nc|ENSG00000188687|Q9BY07-2|SLC4A5;REV__nc|ENSG00000188687|Q9BY07-4|SLC4A5;REV__nc|ENSG00000188687|Q9BY07-5|SLC4A5;REV__nc|ENSG00000188687|Q9BY07-6|SLC4A5;REV__nc|ENSG00000188687|Q9BY07-7|SLC4A5;REV__nc|ENSG00000188687|Q9BY07-8|SLC4A5;REV__nc|ENSG00000188687|Q9BY07|SLC4A5;REV__SLC4A5|p.S1062Pfs*46|1|0.26|ENSG00000188687|chr2:74224950-74224950|A/-|frameshift_variant	21.9598887501803	1.7418937515398478	4				NaN	NaN	0	NaN	12375	4465	16841
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16843	42.984	NaN	2314.5	30	0	629.25	0.036				-1	FLSVSNYIC	9	57	551.7658483454005	1101.517143757601	2	551.7656860351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_FLSVSNYIC(Carbamidomethyl (C))_	CACNA1H|p.F1335C|1|0.26|ENSG00000196557|chr16:1210617-1210617|T/G|missense_variant	44.116797842482775	0.37197099687881774	4				NaN	NaN	0	NaN	12376	4465	16841
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16848	42.999	NaN	1731.2	30	0	177.92	0.214			+	-1	MFRPCQLM	8	49	557.7456868197975	NaN	0	557.7454223632812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),2 Oxidation (M)	_M(Oxidation (M))FRPC(Carbamidomethyl (C))QLM(Oxidation (M))_	REV__ENST00000422154.6_1_X:102931267-102931336:-|nuORF	35.200714571348534	1.7418937515398478	4				NaN	NaN	0	NaN	12378	4468	16847
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16849	43.002	NaN	4681.5	30	0	253.47	0.044			+	-1	RFPYMLFWFRR	11	76	817.924560546875	NaN	0	817.924560546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_RFPYM(Oxidation (M))LFWFRR_	REV__ENSG00000147138|ENST00000645147|GPR174;REV__GPR174|p.T187Gfs*3|1|0.61|ENSG00000147138|chrX:79171564-79171582|TGACCATTGGCGAGTTGAT/-|frameshift_variant	5.55782384252955	0.456735970842152	4				NaN	NaN	0	NaN	12379	4468	16847
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16865	43.046	NaN	1948	30	0	479.68	0.139				-1	 	0	56	347.2033546518687	346.19607818526873	1	347.20257568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12389	4474	16864
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16873	43.066	NaN	1610	30	0	287.11	0.144			+	28965	NSFRCLKQI	9	60	554.7982677436696	NaN	0	554.797607421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NSFRCLKQI_	REV__ADGRF5|p.Q821Afs*22|1|0.06|ENSG00000069122|chr6:46859442-46859443|-/GGGC|frameshift_variant;REV__ENSG00000069122|ENST00000283296|ADGRF5;REV__nc|ENSG00000069122|Q8IZF2-2|ADGRF5;REV__nc|ENSG00000069122|Q8IZF2-3|ADGRF5	87.69643885390035	0.04624013146650493	4				NaN	NaN	0	NaN	12394	4477	16872
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16880	43.085	NaN	2515	30	0	343.7	0.142			+	30440	PYMNQGKH	8	55	487.730022007104	973.4454910810081	2	487.7297668457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PYMNQGKH_	REV__ENSG00000140527|ENST00000268130|WDR93;REV__WDR93|p.F467L|1|0.32|ENSG00000140527|chr15:89733076-89733076|C/A|missense_variant	26.79610172149135	0.7524337208463756	4				NaN	NaN	0	NaN	12398	4480	16879
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16889	43.109	NaN	5790.4	30	0	550.43	0.143	+			5971	AVLLVFANK	9	65	487.80540420606053	973.5962554789211	2	487.8051452636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVLLVFANK_	ENSG00000004059|ENST00000000233|ARF5;ENSG00000134287|ENST00000256682|ARF3;ENSG00000143761|ENST00000272102|ARF1;ENST00000406466.2_1_7:94463564-94463681:+|nuORF;ENST00000444561.2_1_17:43710417-43713807:+|nuORF;ENST00000463733.5_1_7:127230086-127231350:+|nuORF;ENST00000470670.5_1_1:228284963-228285711:+|nuORF;nc|ENSG00000134287|P61204-2|ARF3	101.60071028292904	0.0375685401170269	4				NaN	NaN	0	NaN	12404	4483	16888
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16900	43.136	NaN	2166.9	30	0	455.33	0.142	+			23228	KYGPVFTI	8	47	462.76330077732075	923.5120486214415	2	462.7626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KYGPVFTI_	ENSG00000167600|ENST00000310054|CYP2S1;nc|ENSG00000167600|Q96SQ9-2|CYP2S1	68.78682469695295	0.41700713582915416	4				NaN	NaN	0	NaN	12412	4486	16899
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16924	43.214	NaN	5543.1	30	0	2180.8	0.214				-1	 	0	50	422.1947896491158	421.18751318251583	1	422.1954650878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12424	4498	16923
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16925	43.218	NaN	2567.4	30	0	296.4	0.035				-1	ASMKKVKSL	9	60	336.5342593352082	NaN	0	336.5342712402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_ASM(Oxidation (M))KKVKSL_	ENST00000369426.9_1_1:119575536-119588262:-|nuORF	20.94693142431847	0.3660861156085067	4				NaN	NaN	0	NaN	12425	4498	16923
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16932	43.234	NaN	1020.8	30	0	81.81	0.14	+			47606	VRTHAEIKAF	10	51	391.2251741867085	NaN	0	391.2253112792969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VRTHAEIKAF_	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42|TTN;TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant	21.68575002086885	0.4201028297492154	4				NaN	NaN	0	NaN	12429	4501	16931
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16983	43.421	NaN	1931.8	30	0	306.02	0.214	+			9392	EKEKTFKR	8	50	533.3074440841585	NaN	0	533.308837890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EKEKTFKR_	ENSG00000125351|ENST00000276201|UPF3B;nc|ENSG00000125351|Q9BZI7-2|UPF3B	20.94693142431847	1.7418937515398478	4				NaN	NaN	0	NaN	12447	4534	16982
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	16984	43.424	NaN	1067.6	30	0	236.89	0.03	+			18292	IPNNLLQW	8	42	333.1884727494074	NaN	0	333.1894226074219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IPNNLLQW_	PKDREJ|p.S297L|1|0.22|ENSG00000130943|chr22:46262433-46262433|G/A|missense_variant	28.2542754592877	1.7418937515398478	4				NaN	NaN	0	NaN	12448	4534	16982
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17005	43.485	NaN	4164.8	30	0	632.71	0.144	+			47955	VSMLNVYLK	9	64	533.8019605088718	1065.5893680845436	2	533.8025512695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSMLNVYLK_	ENSG00000111775|ENST00000229379|COX6A1;ENST00000550009.1_1_12:120875908-120876378:+|nuORF	67.49366992349736	0.1516260258713357	4				NaN	NaN	0	NaN	12460	4543	17004
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17025	43.556	NaN	1961.2	30	0	230.22	0.143	+			25114	LLPTHKDAL	9	60	336.5342593352082	NaN	0	336.5342712402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LLPTHKDAL_	ENSG00000151835|ENST00000382292|SACS;nc|ENSG00000151835|Q9NZJ4-2|SACS;SACS|p.A1848Qfs*2|1|0.1|ENSG00000151835|chr13:23338334-23338334|C/-|frameshift_variant;SACS|p.I3485Lfs*10|1|0.24|ENSG00000151835|chr13:23333423-23333423|T/-|frameshift_variant;SACS|p.K2931Nfs*22|1|0.23|ENSG00000151835|chr13:23335083-23335083|T/-|frameshift_variant;SACS|p.L2871Ffs*29|1|0.26|ENSG00000151835|chr13:23335263-23335264|-/A|frameshift_variant;SACS|p.L3102*|1|0.33|ENSG00000151835|chr13:23334571-23334571|A/-|frameshift_variant;SACS|p.P2063Sfs*7|1|0.36|ENSG00000151835|chr13:23337689-23337690|-/A|frameshift_variant;SACS|p.S2058Ffs*2|1|0.3|ENSG00000151835|chr13:23337703-23337704|-/A|frameshift_variant;SACS|p.S2058Lfs*19|1|0.1|ENSG00000151835|chr13:23337704-23337704|A/-|frameshift_variant;SACS|p.S4423Ffs*42|1|0.18|ENSG00000151835|chr13:23330610-23330611|-/G|frameshift_variant;SACS|p.T893A|1|0.09|ENSG00000151835|chr13:23341199-23341199|T/C|missense_variant	26.79610172149135	0.34227917631780574	4				NaN	NaN	0	NaN	12468	4555	17024
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17034	43.579	NaN	3401.7	30	0	400.03	0.145	+			47418	VPPVAPNTQLF	11	64	591.8298752339039	1181.6451975346076	2	591.8298950195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VPPVAPNTQLF_	ENSG00000225697|ENST00000395550|SLC26A6;ENST00000485361.1_1_3:48668404-48668690:-|nuORF;ENST00000489483.5_1_3:48665668-48668656:-|nuORF;ENST00000496469.1_1_3:48667303-48668690:-|nuORF;nc|ENSG00000225697|Q9BXS9-2|SLC26A6;nc|ENSG00000225697|Q9BXS9-3|SLC26A6;nc|ENSG00000225697|Q9BXS9-4|SLC26A6;nc|ENSG00000225697|Q9BXS9-5|SLC26A6;nc|ENSG00000225697|Q9BXS9-6|SLC26A6;nc|ENSG00000225697|Q9BXS9-7|SLC26A6;SLC26A6|p.V540*|2|0.21|ENSG00000225697|chr3:48628696-48628696|C/-|frameshift_variant	53.59686742100583	0.38061189074210516	4				NaN	NaN	0	NaN	12474	4558	17033
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17040	43.597	NaN	4475.5	30	0	468.65	0.138				-1	 	0	80	338.1934570602821	674.3723611873643	2	338.1933898925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12477	4561	17039
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17060	43.657	NaN	2983.1	30	0	383.12	0.136				-1	 	0	77	241.13584038943168	NaN	0	241.1356201171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12488	4570	17059
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17066	43.673	NaN	1826.8	30	0	502.14	0.144			+	-1	YCILCKYR	8	45	559.7802734375	NaN	0	559.7802734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_YC(Carbamidomethyl (C))ILCKYR_	REV__ENSG00000176407|ENST00000409785|KCMF1	28.2542754592877	1.7418937515398478	4				NaN	NaN	0	NaN	12491	4573	17065
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17077	43.709	NaN	1703.5	30	0	250.19	0.144				-1	 	0	44	533.3070994155299	532.2998229489299	1	533.3079223632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12496	4579	17076
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17085	43.73	NaN	2390.6	30	0	319.75	0.143	+			26661	LVEVVVPTGA	10	58	492.29244346096743	982.5703339887349	2	492.29205322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LVEVVVPTGA_	ENSG00000144115|ENST00000674334|THNSL2;ENST00000476349.1_1_2:88478486-88482640:+|nuORF;nc|ENSG00000144115|Q86YJ6-2|THNSL2;nc|ENSG00000144115|Q86YJ6-3|THNSL2;nc|ENSG00000144115|Q86YJ6-5|THNSL2	49.44154591367651	0.46214596422418036	4				NaN	NaN	0	NaN	12501	4582	17084
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17099	43.782	NaN	1530.1	30	0	272.68	0.214			+	50375	WWPLLLGL	8	59	333.20136298703335	NaN	0	333.2012634277344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WWPLLLGL_	REV__ENST00000374979.7_2_11:124644802-124670283:-|nuORF	12.959181472943097	1.7418937515398478	4				NaN	NaN	0	NaN	12506	4591	17098
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17100	43.786	NaN	1868.7	30	0	162.66	0.038	+			5997	AVLYQPLFDK	10	59	597.332628628744	NaN	0	597.3330078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVLYQPLFDK_	ENSG00000187109|ENST00000618691|NAP1L1;ENST00000549988.5_1_12:76453547-76478450:-|nuORF;ENST00000550917.1_1_12:32879649-32880297:-|nuORF;nc|ENSG00000187109|P55209-2|NAP1L1;nc|ENSG00000187109|P55209-3|NAP1L1	30.317721548370564	0.4006274431774794	4				NaN	NaN	0	NaN	12507	4591	17098
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17129	43.877	NaN	2388.8	30	0	581.47	0.214			+	9427	EKKCTHDP	8	50	479.22706915839217	956.4395853835844	2	479.22686767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EKKCTHDP_	REV__ENSG00000258436|ENST00000696784|RNASE12	37.15910966729921	0.6739408393984688	4				NaN	NaN	0	NaN	12521	4606	17128
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17130	43.88	NaN	3993	30	0	1002.2	0.106	+			47083	VLIRRGSMEV	10	61	580.3352176626654	1158.6558823921307	2	580.33544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VLIRRGSMEV_	ENSG00000121895|ENST00000381938|TMEM156	34.172542307311794	0.6007644933930345	4				NaN	NaN	0	NaN	12522	4606	17128
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17131	43.882	NaN	1663.1	30	0	200.88	0.033	+			49403	VVTGVSVAF	9	43	439.7528524141099	NaN	0	439.7526550292969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVTGVSVAF_	ENSG00000105609|ENST00000449561|LILRB5;nc|ENSG00000105609|O75023-2|LILRB5;nc|ENSG00000105609|O75023|LILRB5	57.81127852772723	0.15865383123342353	4				NaN	NaN	0	NaN	12523	4606	17128
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17151	43.932	NaN	3240.5	30	0	370.84	0.138				-1	 	0	65	338.1934570602821	674.3723611873643	2	338.1934814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12537	4612	17150
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17159	43.954	NaN	5000.1	30	0	814.7	0.145				-1	 	0	69	692.4078749048983	691.4005984382983	1	692.4071655273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12542	4615	17158
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17167	43.975	NaN	308870	30	0	33930	0.138				-1	 	0	153	316.1803260393503	630.3460991455006	2	316.1805419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12547	4618	17166
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17189	44.05	NaN	2796.1	30	0	436.61	0.143			+	9233	EGTHLLLPK	9	64	336.5342593352082	NaN	0	336.5343322753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EGTHLLLPK_	REV__ASAH2|p.I504L|1|0.34|ENSG00000188611|chr10:50206002-50206002|T/G|missense_variant	23.04248740728303	0.3589936788096251	4				NaN	NaN	0	NaN	12557	4630	17188
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17216	44.151	NaN	2147.2	30	0	507.54	0.145	+			32214	QTAIHQVPLI	10	53	560.3280459370774	NaN	0	560.3272094726562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QTAIHQVPLI_	HLF|p.L92Cfs*114|1|0.19|ENSG00000108924|chr17:55267906-55267906|T/-|frameshift_variant;HLF|p.S100Afs*106|1|0.55|ENSG00000108924|chr17:55267927-55267927|C/-|frameshift_variant	23.37791116691581	0.4201028297492154	4				NaN	NaN	0	NaN	12566	4648	17215
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17223	44.182	NaN	2616.6	30	0	873.6	0.214				-1	 	0	53	341.01791857926577	NaN	0	341.0176086425781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12567	4654	17222
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17224	44.186	NaN	2644	30	0	498.72	0.037	+			49052	VVINVNNILK	10	57	563.3530883789062	NaN	0	563.3530883789062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVINVNNILK_	ENSG00000069248|ENST00000261396|NUP133;NUP133|p.F1142Lfs*3|1|0.35|ENSG00000069248|chr1:229441949-229441949|A/-|frameshift_variant	40.77816245573522	0.36390427802201647	4				NaN	NaN	0	NaN	12568	4654	17222
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17251	44.275	NaN	1474.2	30	0	60.819	0.14	+			32694	RAGPAGPR	8	57	391.22501209357023	780.4354712539405	2	391.2251281738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RAGPAGPR_	ENST00000321617.7_1_17:73510284-73511587:-|nuORF	19.359975847455235	0.7988239741663654	4				NaN	NaN	0	NaN	12580	4669	17250
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17265	44.316	NaN	1253.4	30	0	122.69	0.138				-1	 	0	60	338.19343407589156	674.3723152185831	2	338.1933288574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12588	4675	17264
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17270	44.332	NaN	4234.3	30	0	475.51	0.143			+	-1	QATTLTMKL	9	59	524.7892217357701	1047.56389053834	2	524.7892456054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))QATTLTMKL_	REV__VEPH1|p.T738Hfs*27|1|0.26|ENSG00000197415|chr3:157265579-157265579|T/-|frameshift_variant	60.11826168202944	0.21262886028301267	4				NaN	NaN	0	NaN	12590	4678	17269
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17274	44.348	NaN	1995.7	30	0	266.3	0.144				-1	LEVGAAIMMI	10	39	532.2819437437504	NaN	0	532.2819213867188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LEVGAAIM(Oxidation (M))MI_	ENST00000455617.1_1_22:17898646-17898763:+|nuORF	24.20275056022122	0.4201028297492154	4				NaN	NaN	0	NaN	12591	4681	17273
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17285	44.386	NaN	4373.8	30	0	602.38	0.143	+			4614	ATLLIFANK	9	70	495.8030199789884	989.5914870247768	2	495.80267333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATLLIFANK_	ENSG00000213465|ENST00000246747|ARL2	101.60071028292904	0.0375685401170269	4				NaN	NaN	0	NaN	12596	4687	17284
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17314	44.492	NaN	3028.4	30	0	538.51	0.214				-1	 	0	57	499.27530715668945	498.26803069008946	1	499.27496337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12607	4705	17313
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17315	44.496	NaN	4363.3	30	0	482.01	0.048				-1	 	0	63	624.2352373868385	623.2279609202385	1	624.2363891601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12608	4705	17313
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17326	44.521	NaN	2236.7	30	0	217.65	0.214			+	7934	DSIILKRY	8	69	336.5342593352082	NaN	0	336.5343017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DSIILKRY_	REV__ENSG00000154358|ENST00000680850|OBSCN;REV__nc|ENSG00000154358|Q5VST9-2|OBSCN;REV__nc|ENSG00000154358|Q5VST9-3|OBSCN;REV__nc|ENSG00000154358|Q5VST9-5|OBSCN;REV__nc|ENSG00000154358|Q5VST9-6|OBSCN;REV__nc|ENSG00000154358|Q5VST9|OBSCN;REV__OBSCN|p.E4688Dfs*35|1|0.03|ENSG00000154358|chr1:228318105-228318106|-/CATCTTC|frameshift_variant;REV__OBSCN|p.E4729Rfs*7|1|0.37|ENSG00000154358|chr1:228318930-228318931|-/C|frameshift_variant;REV__OBSCN|p.H7050Tfs*22|1|0.11|ENSG00000154358|chr1:228371922-228371922|C/-|frameshift_variant;REV__OBSCN|p.P6994Lfs*78|1|0.15|ENSG00000154358|chr1:228371756-228371756|C/-|frameshift_variant;REV__OBSCN|p.S5232Ffs*24|1|0.21|ENSG00000154358|chr1:228332900-228332901|-/T|frameshift_variant;REV__OBSCN|p.V3709Sfs*15|1|0.03|ENSG00000154358|chr1:228293609-228293610|-/A|frameshift_variant	20.481830146152948	1.741893751539848	4				NaN	NaN	0	NaN	12616	4708	17325
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17327	44.525	NaN	2164.1	30	0	332.31	0.034			+	24976	LLDDDSVR	8	52	466.7369936299018	NaN	0	466.7371520996094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LLDDDSVR_	REV__ENSG00000005379|ENST00000343736|TSPOAP1;REV__nc|ENSG00000005379|O95153-2|TSPOAP1;REV__nc|ENSG00000005379|O95153-3|TSPOAP1	45.9519527083369	1.7418937515398478	4				NaN	NaN	0	NaN	12617	4708	17325
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17342	44.587	NaN	5007.9	30	0	573	0.145				-1	 	0	72	667.5225830078125	NaN	0	667.5225830078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12620	4720	17341
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17351	44.611	NaN	1448.9	30	0	89.519	0.214				-1	 	0	50	391.22501209357023	780.4354712539405	2	391.2253723144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12626	4723	17350
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17352	44.614	NaN	3207.4	30	0	445.02	0.035	+			26916	LYDPVISKL	9	67	524.3078806364844	1046.6012083397686	2	524.307861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LYDPVISKL_	ENSG00000187778|ENST00000343810|MCRS1;nc|ENSG00000187778|Q96EZ8-2|MCRS1;nc|ENSG00000187778|Q96EZ8-3|MCRS1	58.22992032128504	0.22837015374068087	4				NaN	NaN	0	NaN	12627	4723	17350
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17416	44.866	NaN	2148.3	30	0	326.89	0.143				-1	ASMKKVKSL	9	58	336.5342593352082	NaN	0	336.5344543457031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ASM(Oxidation (M))KKVKSL_	ENST00000369426.9_1_1:119575536-119588262:-|nuORF	19.996771675451527	0.3693019437812985	4				NaN	NaN	0	NaN	12646	4768	17415
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17427	44.902	NaN	2421.4	30	0	257.71	0.138				-1	 	0	66	338.1934081859297	674.3722634386594	2	338.1936950683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12651	4774	17426
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17432	44.919	NaN	2091	30	0	307.16	0.214				-1	RCSVCKMVI	9	55	556.2748655992998	1110.5351782653995	2	556.2742919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_RC(Carbamidomethyl (C))SVCKM(Oxidation (M))VI_	ENSG00000106524|ENST00000306999|ANKMY2	19.996771675451527	0.6112419832031292	4				NaN	NaN	0	NaN	12653	4777	17431
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17433	44.922	NaN	1744.7	30	0	169.32	0.036				-1	 	0	52	543.301323462771	542.294046996171	1	543.30224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12654	4777	17431
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17440	44.94	NaN	3075.1	30	0	352.11	0.143			+	29587	PFNITKFF	8	54	507.27468888026607	1012.5348248273322	2	507.27410888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PFNITKFF_	REV__ENSG00000114124|ENST00000682958|GRK7	37.15910966729921	0.6739408393984688	4				NaN	NaN	0	NaN	12658	4780	17439
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17460	44.999	NaN	5399.4	30	0	396.78	0.211	+			18284	IPLYRIKDIRM	11	80	709.422674910369	NaN	0	709.4215087890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IPLYRIKDIRM_	ACACA|p.E2200Gfs*26|1|0.48|ENSG00000278540|chr17:37097953-37097954|-/T|frameshift_variant;ENSG00000278540|ENST00000616317|ACACA;nc|ENSG00000278540|Q13085-2|ACACA;nc|ENSG00000278540|Q13085-3|ACACA;nc|ENSG00000278540|Q13085|ACACA	12.95748067046073	0.456735970842152	4				NaN	NaN	0	NaN	12669	4789	17459
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17461	45.003	NaN	1343.7	30	0	123.77	0.032	+			29971	PPAGARGR	8	51	391.2250113280419	780.4354697228838	2	391.2252197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PPAGARGR_	ENST00000446816.1_1_2:96874348-96906424:+|nuORF	14.664097394203935	0.7913966407026132	4				NaN	NaN	0	NaN	12670	4789	17459
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17484	45.087	NaN	17062	30	0	2158	0.139				-1	 	0	88	360.2065220446451	718.3984911560902	2	360.2065734863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12678	4804	17483
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17494	45.122	NaN	1665	30	0	301.41	0.136			+	6307	AVSVQGAGV	9	65	263.14897701742615	NaN	0	263.148681640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVSVQGAGV_	REV__ENSG00000107651|ENST00000369075|SEC23IP;REV__nc|ENSG00000107651|Q9Y6Y8-2|SEC23IP	20.481830146152948	0.3676602570045296	4				NaN	NaN	0	NaN	12682	4810	17493
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17512	45.19	NaN	27080	30	0	6394.6	0.135				-1	 	0	69	217.11818952562612	216.11091305902613	1	217.11830139160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12688	4822	17511
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17526	45.241	NaN	4222.8	30	0	249.72	0.138				-1	 	0	86	338.19337151730775	674.3721901014155	2	338.1934814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12693	4831	17525
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17555	45.356	NaN	3554.8	30	0	750.22	0.136				-1	 	0	72	241.13607144931922	NaN	0	241.13597106933594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12701	4852	17554
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17589	45.489	NaN	6245.1	30	0	2840.8	0.214				-1	 	0	88	285.161887417378	568.309221901556	2	285.1621398925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12711	4876	17588
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17590	45.492	NaN	3169.2	30	0	251.02	0.106				-1	 	0	75	316.1801602203341	630.3457675074682	2	316.1802673339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12712	4876	17588
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17591	45.494	NaN	1666.8	30	0	326.71	0.028				-1	 	0	61	263.14881658621727	524.2830802392346	2	263.14874267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12713	4876	17588
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17595	45.508	NaN	15809	30	0	10009	0.214				-1	 	0	73	219.12259329329265	436.2306336533853	2	219.12266540527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12714	4879	17594
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17596	45.512	NaN	1892.9	30	0	192.7	0.106				-1	 	0	74	307.17503960200116	612.3355262708023	2	307.1751708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12715	4879	17594
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17597	45.513	NaN	4054.3	30	0	359.17	0.029				-1	 	0	84	294.16708889887786	586.3196248645557	2	294.1673583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12716	4879	17594
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17611	45.551	NaN	11610	30	0	9147.9	0.214				-1	 	0	69	346.70664503924024	691.3987371452805	2	346.7065124511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12724	4885	17610
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17612	45.555	NaN	4961	30	0	1061.7	0.036			+	33163	RETNTILTI	9	64	530.8043647250416	1059.5941765168832	2	531.3043823242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RETNTILTI_	REV__ENSG00000149418|ENST00000278742|ST14;REV__ENST00000524718.5_1_11:130059967-130066600:+|nuORF	47.657333605630114	0.33044192980041115	4				NaN	NaN	0	NaN	12725	4885	17610
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17621	45.577	NaN	409320	30	0	55129	0.128				-1	 	0	102	338.19337151730775	674.3721901014155	2	338.1935729980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12731	4888	17620
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17622	45.579	NaN	2670.2	30	0	658.11	0.026				-1	 	0	49	197.10959178141673	NaN	0	197.1096649169922	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12732	4888	17620
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17637	45.63	NaN	4778.9	30	0	1170.9	0.144	+			49882	VYTLLTTHL	9	60	530.8043647250416	1059.5941765168832	2	531.3057250976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYTLLTTHL_	ENSG00000173715|ENST00000540737|C11orf80;nc|ENSG00000173715|Q8N6T0-1|TOP6BL;nc|ENSG00000173715|Q8N6T0-4|TOP6BL;nc|ENSG00000173715|Q8N6T0-5|TOP6BL	68.78682469695295	0.14603441672067394	4				NaN	NaN	0	NaN	12738	4897	17636
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17655	45.697	NaN	2563.4	30	0	461.6	0.136				-1	 	0	75	241.13569252819082	480.25683212318165	2	241.1357879638672	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12744	4909	17654
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17671	45.751	NaN	2019.8	30	0	153.09	0.139	+			29460	PCPAAAGGG	9	65	350.6575038932476	699.3004548532953	2	350.6575927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PCPAAAGGG_	ENSG00000047932|ENST00000368498|GOPC;nc|ENSG00000047932|Q9HD26-2|GOPC;nc|ENSG00000047932|Q9HD26-3|GOPC	14.664097394203935	0.6112419832031292	4				NaN	NaN	0	NaN	12751	4918	17670
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17691	45.821	NaN	2918	30	0	282.64	0.144	+			29282	NYIGLINRI	9	58	538.316390073044	1074.6182272128879	2	538.3175048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NYIGLINRI_	ENSG00000055332|ENST00000233057|EIF2AK2;ENST00000496059.1_1_2:37364124-37368826:-|nuORF;nc|ENSG00000055332|P19525-2|EIF2AK2	75.04331003522576	0.118981335847003	4				NaN	NaN	0	NaN	12759	4930	17690
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17705	45.871	NaN	2993.2	30	0	641.85	0.144	+			34664	RVRNLQHF	8	55	535.3063244418951	NaN	0	535.3060913085938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVRNLQHF_	ENSG00000198753|ENST00000361971|PLXNB3;nc|ENSG00000198753|Q9ULL4-2|PLXNB3;PLXNB3|p.G1176Afs*22|1|0.15|ENSG00000198753|chrX:153774191-153774191|G/-|frameshift_variant;PLXNB3|p.L1091Cfs*36|1|0.53|ENSG00000198753|chrX:153773699-153773699|G/-|frameshift_variant;PLXNB3|p.V1655Cfs*7|1|0.56|ENSG00000198753|chrX:153777236-153777236|G/-|frameshift_variant	26.79610172149135	1.7418937515398478	4				NaN	NaN	0	NaN	12764	4939	17704
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17718	45.923	NaN	7183.8	30	0	1066.6	0.138				-1	 	0	76	338.19337151730775	674.3721901014155	2	338.19354248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12768	4948	17717
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17731	45.974	NaN	1304.2	30	0	166.95	0.143			+	42104	SYKGILNLL	9	44	510.8085008784435	1019.602448823687	2	510.8074645996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SYKGILNLL_	REV__ENSG00000137266|ENST00000406686|SLC22A23;REV__ENST00000497691.5_1_6:3273291-3410459:-|nuORF;REV__nc|ENSG00000137266|A1A5C7-2|SLC22A23;REV__nc|ENSG00000137266|A1A5C7-3|SLC22A23;REV__SLC22A23|p.E648Sfs*36|1|0.22|ENSG00000137266|chr6:3273174-3273174|C/-|frameshift_variant	36.446750945000026	0.4619375763483977	4				NaN	NaN	0	NaN	12772	4957	17730
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17736	45.991	NaN	1669.8	30	0	274.07	0.141	+			43771	TLHIIMGG	8	30	421.2338184894643	840.4530840457286	2	421.2337341308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TLHIIMGG_	ENSG00000124467|ENST00000306511|PSG8;nc|ENSG00000124467|Q9UQ74-3|PSG8;PSG8|p.Q383Kfs*27|1|0.34|ENSG00000124467|chr19:42754429-42754429|G/-|frameshift_variant	15.63621529709179	0.7929342111279789	4				NaN	NaN	0	NaN	12774	4960	17735
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17753	46.059	NaN	3763.8	30	0	1156.5	0.214				-1	 	0	49	450.1668117952363	898.3190706572726	2	450.16668701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12779	4972	17752
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17754	46.062	NaN	2920	30	0	413.48	0.036				-1	ALHVPKAPGF	10	58	539.8056518450019	1077.5967507568037	2	539.8057861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))ALHVPKAPGF_	ENSG00000156261|ENST00000286788|CCT8;ENST00000470450.5_1_21:30445830-30445917:-|nuORF;ENST00000484403.5_1_21:30439206-30445917:-|nuORF;ENST00000540844.5_1_21:30439913-30445917:-|nuORF	33.921630207806714	0.6028135429846169	4				NaN	NaN	0	NaN	12780	4972	17752
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17801	46.263	NaN	2097.2	30	0	167.16	0.138				-1	 	0	68	338.19337151730775	674.3721901014155	2	338.19354248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12791	5008	17800
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17810	46.286	NaN	2815.6	30	0	534.8	0.143			+	8656	EDRLKEDQ	8	46	516.7511458947577	1031.4877388563152	2	516.7506103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EDRLKEDQ_	REV__ENSG00000124251|ENST00000372726|TP53TG5	21.9598887501803	0.7897753010812679	4				NaN	NaN	0	NaN	12797	5011	17809
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17820	46.322	NaN	2168.7	30	0	431.11	0.144	+			51386	YTMIYRNL	8	45	537.2757568178873	1072.5369607025746	2	537.2762451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YTMIYRNL_	ENSG00000135679|ENST00000258149|MDM2;MDM2|p.L305Ffs*16|1|0.09|ENSG00000135679|chr12:68836745-68836746|-/CAATCAGA|frameshift_variant;nc|ENSG00000135679|Q00987-10|MDM2;nc|ENSG00000135679|Q00987-8|MDM2;nc|ENSG00000135679|Q00987-9|MDM2;nc|ENSG00000135679|Q00987|MDM2	21.9598887501803	0.7897753010812679	4				NaN	NaN	0	NaN	12801	5017	17819
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17824	46.338	NaN	1679.1	30	0	228.99	0.215	+			47063	VLGRLSYSI	9	54	336.5342593352082	NaN	0	336.5341491699219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VLGRLSYSI_	ENSG00000186795|ENST00000334549|KCNK18	25.450171626174864	0.34907449758287085	4				NaN	NaN	0	NaN	12802	5020	17823
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17825	46.341	NaN	2822.9	30	0	355.69	0.037			+	17539	IDQYKLNEI	9	50	568.3039087173581	NaN	0	568.3035278320312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IDQYKLNEI_	REV__tr|U7T063|U7T063_FUSNURibonucleasePproteincomponentOS=FusobacteriumnucleatumCTI-5OX=1316586GN=rnpAPE=3SV=1	61.691277971877994	0.14210560126578747	4				NaN	NaN	0	NaN	12803	5020	17823
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17843	46.421	NaN	2583.7	30	0	317.19	0.214				-1	 	0	46	382.2196191829937	762.4246854327874	2	382.2198181152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12806	5035	17842
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17844	46.424	NaN	3421.4	30	0	401.24	0.039	+			21423	KMVRFRIVVR	10	63	652.4121017239303	NaN	0	652.4111328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KMVRFRIVVR_	ENST00000533778.6_1_11:125496395-125496497:+|nuORF	15.641811463095205	0.4201028297492154	4				NaN	NaN	0	NaN	12807	5035	17842
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17853	46.446	NaN	6821	30	0	519.5	0.139				-1	 	0	82	360.2064353976704	718.3983178621409	2	360.20654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12813	5038	17852
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17867	46.498	NaN	2548.4	30	0	270.74	0.144			+	7546	DHAGLSAMLF	10	52	531.2580545633024	1060.5015561934047	2	531.2581176757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DHAGLSAMLF_	REV__ENSG00000075234|ENST00000381031|TTC38	42.396135135203025	0.5270658956260207	4				NaN	NaN	0	NaN	12818	5047	17866
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17884	46.567	NaN	3778.1	30	0	311.65	0.139				-1	 	0	66	360.2064353976704	718.3983178621409	2	360.2064514160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12823	5059	17883
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17891	46.599	NaN	1254.3	30	0	103.53	0.138				-1	 	0	54	338.19337151730775	674.3721901014155	2	338.1937255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12824	5065	17890
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17918	46.703	NaN	2832.1	30	0	430.64	0.145	+			38329	SRGPSQVEREG	11	57	601.2979448440468	1200.5813367548935	2	601.2988891601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SRGPSQVEREG_	PITPNM1|p.A1216V|1|0.2|ENSG00000110697|chr11:67492121-67492121|G/A|missense_variant	45.02220120713402	0.4892240028381124	4				NaN	NaN	0	NaN	12833	5083	17917
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17932	46.756	NaN	1639.9	30	0	173.98	0.212	+			25071	LLLLPIPLIVW	11	41	645.433349609375	NaN	0	645.433349609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LLLLPIPLIVW_	ENSG00000026103|ENST00000652046|FAS;ENST00000371857.7_1_10:90770493-90770607:+|nuORF;ENST00000494410.5_1_10:90770523-90773122:+|nuORF;FAS|p.A301Sfs*20|1|0.36|ENSG00000026103|chr10:89014336-89014337|-/A|frameshift_variant;nc|ENSG00000026103|P25445-7|FAS	6.735540347417125	0.456735970842152	4				NaN	NaN	0	NaN	12838	5092	17931
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17933	46.759	NaN	1369.7	30	0	121.71	0.038				-1	 	0	41	627.9676513671875	NaN	0	627.9676513671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12839	5092	17931
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17937	46.773	NaN	1570.9	30	0	82.818	0.14				-1	 	0	55	382.2196191829937	762.4246854327874	2	382.21978759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12840	5095	17936
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17943	46.791	NaN	18635	30	0	1272.4	0.139				-1	 	0	108	360.20646228724866	718.3983716412973	2	360.2065124511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12843	5098	17942
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17954	46.84	NaN	1364.4	30	0	105.08	0.143			+	17280	IAANVNPLPV	10	50	336.5342593352082	NaN	0	336.5343322753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IAANVNPLPV_	REV__ENSG00000113558|ENST00000353411|SKP1;REV__ENST00000506450.1_1_4:25624416-25624897:+|nuORF;REV__nc|ENSG00000113558|P63208-2|SKP1	18.324413293986947	0.4201028297492154	4				NaN	NaN	0	NaN	12845	5107	17953
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17969	46.895	NaN	1765.6	30	0	302.25	0.214				-1	 	0	68	263.14880022086436	524.2830475085287	2	263.1488952636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12851	5116	17968
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17970	46.898	NaN	1654.1	30	0	190.23	0.03				-1	 	0	72	307.17500249621685	612.3354520592337	2	307.17523193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12852	5116	17968
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17974	46.913	NaN	6962.9	30	0	4532.4	0.214				-1	 	0	54	368.719796319431	735.425039705662	2	368.7197570800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12853	5119	17973
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17975	46.916	NaN	6140	30	0	3060	0.106				-1	 	0	85	285.161916607959	568.309280282718	2	285.1621398925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12854	5119	17973
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17976	46.918	NaN	2448.9	30	0	431.02	0.028				-1	 	0	70	241.1357327894242	480.2569126456484	2	241.13584899902344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12855	5119	17973
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17981	46.932	NaN	17225	30	0	11186	0.214				-1	 	0	66	219.1227013006019	NaN	0	219.12277221679688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12857	5122	17980
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17982	46.936	NaN	3144.5	30	0	208.48	0.03	+			18808	ITTVSILCP	9	84	316.1803824182809	NaN	0	316.180419921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ITTVSILCP_	ENSG00000180902|ENST00000321264|D2HGDH;ENST00000436747.5_1_2:242681986-242688401:+|nuORF;nc|ENSG00000180902|Q8N465-2|D2HGDH;nc|ENSG00000180902|Q8N465-3|D2HGDH	25.57405402267927	0.3484490411150625	4				NaN	NaN	0	NaN	12858	5122	17980
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17990	46.955	NaN	3717.3	30	0	339.55	0.214				-1	 	0	66	338.1934060043862	674.3722590755724	2	338.1934814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12863	5125	17989
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17991	46.959	NaN	2042	30	0	252.79	0.036	+			50948	YICRCLFKA	9	62	558.7907595923954	1115.5669662515907	2	558.7900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YICRCLFKA_	DYNC2H1|p.L4021Wfs*5|1|0.3|ENSG00000187240|chr11:103358262-103358262|T/-|frameshift_variant;DYNC2H1|p.P3966Hfs*44|1|0.22|ENSG00000187240|chr11:103321194-103321194|T/-|frameshift_variant;ENSG00000187240|ENST00000375735|DYNC2H1;nc|ENSG00000187240|Q8NCM8-2|DYNC2H1	50.0245360154114	0.3026755932229825	4				NaN	NaN	0	NaN	12864	5125	17989
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	17996	46.973	NaN	3035.5	30	0	452.21	0.145				-1	 	0	61	692.4077439317957	691.4004674651957	1	692.405517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12866	5128	17995
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18008	47.012	NaN	2557.5	30	0	345.39	0.154				-1	 	0	60	617.1104040288049	NaN	0	617.1101684570312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12872	5134	18007
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18020	47.062	NaN	8597.7	30	0	978.27	0.138				-1	 	0	77	340.2090195040977	678.4034860749954	2	340.2091979980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12875	5143	18019
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18034	47.115	NaN	3435.4	30	0	691.71	0.214				-1	 	0	84	243.15133353854773	484.2881141438955	2	243.15145874023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12880	5152	18033
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18035	47.118	NaN	9499.3	30	0	1252.4	0.027				-1	 	0	70	221.1382459384349	440.2619389436698	2	221.1383819580078	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12881	5152	18033
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18039	47.132	NaN	26340	30	0	3080.3	0.214				-1	 	0	104	360.20646228724866	718.3983716412973	2	360.2066345214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12882	5155	18038
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18040	47.136	NaN	2048.5	30	0	432.69	0.106				-1	 	0	55	199.12515976896475	396.2357666047295	2	199.1251678466797	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12883	5155	18038
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18041	47.138	NaN	3138.5	30	0	293.71	0.03				-1	 	0	66	318.19592438100744	634.3772958288149	2	318.19647216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12884	5155	18038
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18047	47.153	NaN	6313.7	30	0	3079.2	0.137				-1	 	0	92	296.1827739970462	590.3509950608924	2	296.1829528808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12887	5158	18046
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18051	47.169	NaN	3264	30	0	551.97	0.136				-1	 	0	74	265.16451425517164	528.3144755771433	2	265.1643981933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12888	5161	18050
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18055	47.185	NaN	3241.4	30	0	1209.2	0.137			+	49039	VVHVVGLH	8	72	287.1775121927783	NaN	0	287.1777038574219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVHVVGLH_	REV__ENST00000552189.5_1_12:48477420-48482695:-|nuORF	7.690282842768113	1.7418937515398478	4				NaN	NaN	0	NaN	12889	5164	18054
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18077	47.271	NaN	2633.3	30	0	548.07	0.142	+			21312	KLSYSLKK	8	47	483.8029846834091	965.5914164336182	2	483.802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KLSYSLKK_	ENST00000377689.2_1_9:38527126-38527906:+|nuORF;nc|ENSG00000176007|B1ANY3|FAM220BP	27.882242232435846	0.7440473649773525	4				NaN	NaN	0	NaN	12896	5179	18076
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18092	47.335	NaN	2413.7	30	0	368.83	0.145				-1	 	0	50	638.9734228489098	NaN	0	638.9744873046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12899	5191	18091
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18096	47.351	NaN	1286.2	30	0	306.05	0.139	+			6952	CPKKKWHL	8	41	347.2010325136463	NaN	0	347.2009582519531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CPKKKWHL_	ENSG00000173557|ENST00000329615|FAM166C;ENST00000479453.1_1_2:26802129-26802303:+|nuORF	33.51558372728122	1.7418937515398478	4				NaN	NaN	0	NaN	12900	5194	18095
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18113	47.418	NaN	14954	30	0	1312.9	0.138				-1	 	0	98	340.2090195040977	678.4034860749954	2	340.7107849121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12905	5206	18112
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18130	47.499	NaN	4247.3	30	0	255.76	0.139				-1	 	0	72	360.20646228724866	718.3983716412973	2	360.20660400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12907	5221	18129
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18162	47.648	NaN	1713.1	30	0	149.22	0.143				-1	ASMKKVKSL	9	45	336.5342593352082	NaN	0	336.5343017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ASM(Oxidation (M))KKVKSL_	ENST00000369426.9_1_1:119575536-119588262:-|nuORF	20.94693142431847	0.3660861156085067	4				NaN	NaN	0	NaN	12912	5248	18161
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18186	47.738	NaN	1323.7	30	0	107.76	0.14				-1	 	0	50	382.21965242738725	762.4247519215745	2	382.21929931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12921	5263	18185
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18210	47.854	NaN	1444	30	0	262.38	0.15	+			19651	KDLKSYFS	8	37	494.2603216104277	NaN	0	494.259765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KDLKSYFS_	tr|U7SIQ9|U7SIQ9_FUSNUYARHGdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02142PE=4SV=1	25.450171626174864	1.7418937515398478	4				NaN	NaN	0	NaN	12924	5284	18209
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18246	48.02	NaN	1180.2	30	0	139.17	0.143	+			28879	NQEGATPVSL	10	42	508.2584904115323	1014.5024278898646	2	508.2582092285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NQEGATPVSL_	AKAP13|p.F990Lfs*18|1|0.38|ENSG00000170776|chr15:85581035-85581038|CTTT/-|frameshift_variant;AKAP13|p.T1197Hfs*9|1|0.33|ENSG00000170776|chr15:85581652-85581653|-/C|frameshift_variant;AKAP13|p.T2400Nfs*3|1|0.33|ENSG00000170776|chr15:85730617-85730618|-/C|frameshift_variant;AKAP13|p.T565Qfs*18|1|0.46|ENSG00000170776|chr15:85579756-85579756|A/-|frameshift_variant;ENSG00000170776|ENST00000394518|AKAP13;nc|ENSG00000170776|Q12802-2|AKAP13;nc|ENSG00000170776|Q12802-4|AKAP13	44.377184641726394	0.5088115166961078	4				NaN	NaN	0	NaN	12930	5314	18245
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18253	48.052	NaN	1473.8	30	0	139.38	0.143	+			11877	FTIKLGKGSG	10	55	336.5342593352082	NaN	0	336.5337829589844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FTIKLGKGSG_	tr|U7SPB8|U7SPB8_FUSNUTrimericautotransporteradhesinYadA-likeC-terminalmembraneanchordomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01806PE=3SV=1	20.94693142431847	0.4201028297492154	4				NaN	NaN	0	NaN	12931	5320	18252
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18257	48.068	NaN	645.53	30	0	76.798	0.142				-1	 	0	34	473.0439758300781	NaN	0	473.0439758300781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12932	5323	18256
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18262	48.085	NaN	5136.6	30	0	293.38	0.14				-1	 	0	71	382.21959227492965	762.4246316166593	2	382.2198181152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12934	5326	18261
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18277	48.15	NaN	1053.1	30	0	132.64	0.14				-1	 	0	30	398.17837140629297	397.171094939693	1	398.1787414550781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12937	5338	18276
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18305	48.257	NaN	4798.4	30	0	2337.2	0.137	+			30395	PVRGWPAA	8	71	285.1620904008996	NaN	0	285.1620788574219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PVRGWPAA_	ENST00000429770.5_2_3:50402382-50403264:-|nuORF;ENST00000483620.1_1_3:50402099-50403170:-|nuORF	12.206847966760668	1.7418937515398478	4				NaN	NaN	0	NaN	12947	5356	18304
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18309	48.273	NaN	4998.2	30	0	3114.3	0.14				-1	 	0	68	390.7329202646929	779.4512875961858	2	390.7329406738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12948	5359	18308
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18339	48.406	NaN	9392.8	30	0	1564.2	0.139				-1	 	0	72	362.22207146041615	722.4295899876323	2	362.22222900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12954	5383	18338
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18343	48.422	NaN	17485	30	0	1871.7	0.14				-1	 	0	90	382.21959227492965	762.4246316166593	2	382.21966552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12955	5386	18342
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18351	48.455	NaN	3251	30	0	731.22	0.136				-1	 	0	82	243.15143455303206	NaN	0	243.15145874023438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12957	5392	18350
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18355	48.47	NaN	9453.4	30	0	1429	0.214				-1	 	0	64	221.13817511174477	440.26179729028956	2	221.1383514404297	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12958	5395	18354
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18356	48.474	NaN	2020.7	30	0	232.82	0.035				-1	ASTKKVVMK	9	52	336.5342593352082	NaN	0	336.53436279296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_ASTKKVVM(Oxidation (M))K_	CFAP47|p.F1567Vfs*4|1|0.31|ENSG00000165164|chrX:36098829-36098830|-/G|frameshift_variant;CFAP47|p.H2345Afs*15|1|0.09|ENSG00000165164|chrX:36236809-36236810|-/A|frameshift_variant;CFAP47|p.K734Nfs*6|1|0.13|ENSG00000165164|chrX:35971909-35971909|A/-|frameshift_variant;CFAP47|p.P2326Tfs*34|1|0.26|ENSG00000165164|chrX:36236751-36236752|-/A|frameshift_variant;ENSG00000165164|ENST00000378653|CFAP47;nc|ENSG00000165164|Q6ZTR5-1|CFAP47;nc|ENSG00000165164|Q6ZTR5-2|CFAP47;nc|ENSG00000165164|Q6ZTR5-6|CFAP47	17.468008924990375	0.37786057458515737	4				NaN	NaN	0	NaN	12959	5395	18354
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18363	48.492	NaN	3791.4	30	0	645.25	0.136	+			29412	PAVSPLLP	8	84	265.16455185200897	NaN	0	265.1645812988281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PAVSPLLP_	ABL1|p.L651Wfs*43|1|0.26|ENSG00000097007|chr9:130884236-130884236|C/-|frameshift_variant;ABL1|p.R785Gfs*3|2|0.3|ENSG00000097007|chr9:130884637-130884637|C/-|frameshift_variant;ENSG00000097007|ENST00000318560|ABL1;nc|ENSG00000097007|P00519-2|ABL1	12.959181472943097	1.7418937515398478	4				NaN	NaN	0	NaN	12963	5398	18362
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18409	48.72	NaN	10731	30	0	1212.1	0.139				-1	 	0	86	360.20645033411944	718.3983477350389	2	360.2065124511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12967	5440	18408
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18417	48.753	NaN	7725.6	30	0	1177	0.139				-1	 	0	72	362.22207146041615	722.4295899876323	2	362.2221984863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12969	5446	18416
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18437	48.839	NaN	1682.9	30	0	205.94	0.144	+			995	AEKKKSFGI	9	59	336.5342593352082	NaN	0	336.5344543457031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEKKKSFGI_	nc|ENSG00000153237|Q8NFR7-2|CCDC148	20.481830146152948	0.3676602570045296	4				NaN	NaN	0	NaN	12974	5461	18436
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18445	48.871	NaN	3395.9	30	0	219.61	0.141				-1	 	0	67	426.2456621801562	850.4767714271125	2	426.245849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12976	5467	18444
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18449	48.887	NaN	4555.2	30	0	308.57	0.145			+	-1	TMNMCLLMKQL	11	71	699.8332554687873	1397.6519580043746	2	699.8312377929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_TM(Oxidation (M))NMC(Carbamidomethyl (C))LLMKQL_	REV__ENST00000444067.2_1_1:78312795-78313113:+|nuORF	14.864876125193954	0.8008860636109596	4				NaN	NaN	0	NaN	12977	5470	18448
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18455	48.905	NaN	4647.1	30	0	568.42	0.146	+			7842	DQNKDRMLEIL	11	65	687.8537920749868	1373.6930312167735	2	687.8534545898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DQNKDRMLEIL_	EIF4G2|p.S788Afs*15|1|0.36|ENSG00000110321|chr11:10799388-10799388|G/-|frameshift_variant;ENSG00000110321|ENST00000339995|EIF4G2;nc|ENSG00000110321|P78344-2|EIF4G2	27.047317107675042	0.7060868989289394	4				NaN	NaN	0	NaN	12980	5473	18454
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18473	48.987	NaN	1322.1	30	0	214.6	0.143			+	29556	PESHEASEL	9	43	499.7236051499643	NaN	0	499.7233581542969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PESHEASEL_	REV__ENSG00000125534|ENST00000370179|PPDPF	31.954861631926434	0.3162336699109506	4				NaN	NaN	0	NaN	12983	5488	18472
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18502	49.119	NaN	1712.1	30	0	608.2	0.146	+			9294	EHQERQEVE	9	36	395.1845036843844	NaN	0	395.1846618652344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EHQERQEVE_	ENSG00000157741|ENST00000473989|UBN2;nc|ENSG00000157741|Q6ZU65-2|UBN2;UBN2|p.G1191Efs*28|1|0.17|ENSG00000157741|chr7:139284473-139284473|G/-|frameshift_variant;UBN2|p.K314Rfs*11|1|0.15|ENSG00000157741|chr7:139261281-139261281|A/-|frameshift_variant;UBN2|p.K315Efs*5|1|0.25|ENSG00000157741|chr7:139261280-139261281|-/A|frameshift_variant;UBN2|p.K542Nfs*2|1|0.14|ENSG00000157741|chr7:139272347-139272347|A/-|frameshift_variant;UBN2|p.L543Tfs*6|1|0.38|ENSG00000157741|chr7:139272346-139272347|-/A|frameshift_variant;UBN2|p.S988Hfs*27|1|0.18|ENSG00000157741|chr7:139283862-139283862|C/-|frameshift_variant	30.317721548370564	0.32449924987115025	4				NaN	NaN	0	NaN	12988	5512	18501
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18512	49.167	NaN	1319.3	30	0	121.81	0.14				-1	 	0	55	383.2637904651186	382.2565139985186	1	385.2696838378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12989	5521	18511
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18519	49.199	NaN	1755.4	30	0	227.07	0.143	+			39550	STFVLQKKG	9	52	336.5342593352082	NaN	0	336.5345153808594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STFVLQKKG_	ENSG00000170113|ENST00000337435|NIPA1;ENST00000560105.1_1_15:23062266-23086303:-|nuORF	24.20275056022122	0.35506675290109213	4				NaN	NaN	0	NaN	12990	5527	18518
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18551	49.348	NaN	4713.8	30	0	352.32	0.145				-1	 	0	77	668.1877875598843	667.1805110932843	1	668.187744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12995	5554	18550
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18555	49.364	NaN	5739.6	30	0	591.47	0.211				-1	 	0	75	674.1925521324525	673.1852756658525	1	674.1939697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	12996	5557	18554
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18556	49.367	NaN	5623.3	30	0	440.35	0.039			+	-1	MCICCEEEDT	10	77	653.2094352167251	1304.40431750025	2	653.2056274414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))C(Carbamidomethyl (C))IC(Carbamidomethyl (C))CEEEDT_	REV__ENSG00000110315|ENST00000265981|RNF141	10.865556482863946	0.761236200923858	4				NaN	NaN	0	NaN	12997	5557	18554
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18563	49.385	NaN	4816.5	30	0	739.23	0.213			+	-1	CHPICTFCF	9	75	621.2489589471901	1240.48336496118	2	621.2490844726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	3 Carbamidomethyl (C)	_C(Carbamidomethyl (C))HPIC(Carbamidomethyl (C))TFC(Carbamidomethyl (C))F_	REV__ENST00000395148.6_1_2:202001156-202001399:+|nuORF	19.359975847455235	0.6112419832031293	4				NaN	NaN	0	NaN	13001	5560	18562
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18564	49.389	NaN	7699.9	30	0	526.35	0.106				-1	DNSSDTEMEDM	11	80	653.2094352167251	1304.40431750025	2	653.710205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Oxidation (M)	_DNSSDTEM(Oxidation (M))EDM(Oxidation (M))_	ENSG00000173889|ENST00000495893|PHC3;nc|ENSG00000173889|Q8NDX5-2|PHC3;nc|ENSG00000173889|Q8NDX5|PHC3	17.468008924990375	0.788697330333842	4				NaN	NaN	0	NaN	13002	5560	18562
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18565	49.391	NaN	5396.7	30	0	780.28	0.106			+	-1	PGTCPPPCMCC	11	72	640.2232400626696	1278.431927192139	2	640.724365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	3 Carbamidomethyl (C)	_PGTC(Carbamidomethyl (C))PPPC(Carbamidomethyl (C))MC(Carbamidomethyl (C))C_	REV__ENST00000487891.1_1_3:49020199-49020700:+|nuORF	10.265252068803164	0.8224230327593429	4				NaN	NaN	0	NaN	13003	5560	18562
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18566	49.393	NaN	2503.6	30	0	168.67	0.106				-1	PDSEEGNDMVF	11	57	628.2433779587564	1254.4722029843126	2	628.242919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_PDSEEGNDM(Oxidation (M))VF_	ENSG00000102221|ENST00000614628|JADE3;JADE3|p.N368Tfs*58|1|0.26|ENSG00000102221|chrX:47054285-47054285|A/-|frameshift_variant	14.137123925751023	0.8042936413770803	4				NaN	NaN	0	NaN	13004	5560	18562
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18567	49.394	NaN	7852.7	30	0	467.16	0.106				-1	 	0	86	713.677464971451	NaN	0	713.6771850585938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13005	5560	18562
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18568	49.396	NaN	6637.6	30	0	428.14	0.106				-1	FMGHCYSCMCS	11	75	663.2146617321401	1324.4147705310802	2	663.71435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_FMGHCYSC(Carbamidomethyl (C))MCS_	OR8J1|p.Y252Mfs*31|1|0.14|ENSG00000172487|chr11:56360995-56360995|T/-|frameshift_variant	14.137123925751023	0.8042936413770803	4				NaN	NaN	0	NaN	13006	5560	18562
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18569	49.398	NaN	1591.5	30	0	209.94	0.034				-1	MMGSYMCQ	8	49	483.66298015052155	965.3114073678431	2	484.1640930175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_M(Oxidation (M))MGSYMCQ_	TLL1|p.T748M|1|0.45|ENSG00000038295|chr4:166074932-166074932|C/T|missense_variant	14.664097394203935	0.7913966407026132	4				NaN	NaN	0	NaN	13007	5560	18562
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18573	49.412	NaN	6318.8	30	0	587.47	0.212			+	-1	SCETDMCDGHS	11	69	649.7080892637168	1297.4016255942336	2	649.7084350585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_SC(Carbamidomethyl (C))ETDMC(Carbamidomethyl (C))DGHS_	REV__FBN3|p.G1826C|1|0.26|ENSG00000142449|chr19:8096507-8096507|C/A|missense_variant	24.519189625965996	0.7326048944360514	4				NaN	NaN	0	NaN	13008	5563	18572
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18574	49.416	NaN	10857	30	0	699.93	0.106				-1	DIPSCMDEECM	11	81	681.2223745619067	1360.4301961906133	2	681.2225952148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),2 Oxidation (M)	_DIPSCM(Oxidation (M))DEEC(Carbamidomethyl (C))M(Oxidation (M))_	ENSG00000010818|ENST00000367603|HIVEP2;HIVEP2|p.E2269Sfs*37|1|0.07|ENSG00000010818|chr6:142753643-142753643|C/-|frameshift_variant;HIVEP2|p.N2325Kfs*44|1|0.35|ENSG00000010818|chr6:142753473-142753474|-/T|frameshift_variant	9.705651100619752	0.8250432705525658	4				NaN	NaN	0	NaN	13009	5563	18572
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18575	49.418	NaN	9570.6	30	0	595.31	0.106			+	-1	CDRCDCMFNCV	11	83	691.2255017178542	1380.4364505025083	2	691.2244873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_C(Carbamidomethyl (C))DRCDCM(Oxidation (M))FNCV_	REV__MAMDC4|p.V39M|1|0.26|ENSG00000177943|chr9:136853170-136853170|G/A|missense_variant	9.182911543092327	0.8274909109651483	4				NaN	NaN	0	NaN	13010	5563	18572
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18576	49.419	NaN	1509.7	30	0	272.71	0.106				-1	HCCAPPAE	8	39	471.183898015739	940.353243098278	2	471.1835632324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_HC(Carbamidomethyl (C))C(Carbamidomethyl (C))APPAE_	ENSG00000108389|ENST00000682306|MTMR4;MTMR4|p.F1143Lfs*14|1|0.15|ENSG00000108389|chr17:58491822-58491823|-/T|frameshift_variant;nc|ENSG00000108389|Q9NYA4|MTMR4	15.63621529709179	0.7929342111279789	4				NaN	NaN	0	NaN	13011	5563	18572
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18577	49.421	NaN	6020.8	30	0	452.61	0.106				-1	 	0	84	686.1704890255672	NaN	0	686.1724243164062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13012	5563	18572
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18578	49.423	NaN	5500.6	30	0	295.71	0.106				-1	 	0	84	736.1544189453125	NaN	0	736.1544189453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13013	5563	18572
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18579	49.425	NaN	1306.1	30	0	108.38	0.035			+	-1	DVCDCCED	8	47	500.63668294558585	999.2588129579717	2	500.6378173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))DVC(Carbamidomethyl (C))DCCED_	REV__nc|ENSG00000128791|Q9GZX9-2|TWSG1	8.231297230196988	0.7812220690224883	4				NaN	NaN	0	NaN	13014	5563	18572
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18586	49.443	NaN	20994	30	0	1906.7	0.214	+			30032	PPRAGGPR	8	94	404.232703048871	806.450853164542	2	404.2328796386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PPRAGGPR_	ENST00000164227.9_1_19:45263103-45263223:+|nuORF	19.359975847455235	0.7988239741663654	4				NaN	NaN	0	NaN	13018	5566	18585
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18587	49.446	NaN	6595.9	30	0	1256.6	0.106				-1	 	0	69	621.2489589471901	1240.48336496118	2	621.2490844726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13019	5566	18585
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18588	49.448	NaN	5005.9	30	0	467.42	0.106				-1	CVDPEDCPVCE	11	72	633.2286587856617	1264.4427646381232	2	633.72998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_CVDPEDC(Carbamidomethyl (C))PVCE_	ENSG00000110799|ENST00000261405|VWF;VWF|p.D1472Tfs*53|1|0.21|ENSG00000110799|chr12:6019004-6019004|C/-|frameshift_variant	24.519189625965996	0.7326048944360514	4				NaN	NaN	0	NaN	13020	5566	18585
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18589	49.45	NaN	9677.3	30	0	846.31	0.106			+	-1	ECECMCLCMC	10	74	669.689734771368	NaN	0	669.6908569335938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	3 Carbamidomethyl (C)	_EC(Carbamidomethyl (C))ECMC(Carbamidomethyl (C))LC(Carbamidomethyl (C))MC_	REV__ENST00000278426.7_2_11:57252034-57252334:-|nuORF	6.31265097734313	0.4201028297492154	4				NaN	NaN	0	NaN	13021	5566	18585
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18590	49.452	NaN	6289.3	30	0	286.52	0.106				-1	 	0	95	823.2630983646019	NaN	0	823.2626953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13022	5566	18585
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18591	49.454	NaN	6227.8	30	0	544.54	0.106				-1	HCHCHYYYHSN	11	84	789.2954396767909	1576.5763264203817	2	789.2941284179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Carbamidomethyl (C)	_HC(Carbamidomethyl (C))HC(Carbamidomethyl (C))HYYYHSN_	ENST00000306107.9_3_3:105085858-105238971:+|nuORF	9.182911543092327	0.8274909109651483	4				NaN	NaN	0	NaN	13023	5566	18585
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18592	49.455	NaN	6567.7	30	0	436.53	0.043			+	-1	WCCEKWEMCTC	11	85	796.7778607560994	1591.5411685789986	2	797.281005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	3 Carbamidomethyl (C)	_WC(Carbamidomethyl (C))CEKWEMC(Carbamidomethyl (C))TC(Carbamidomethyl (C))_	REV__ENST00000397561.3_1_9:14921673-14921847:-|nuORF	5.55782384252955	0.84446477687463	4				NaN	NaN	0	NaN	13024	5566	18585
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18598	49.472	NaN	11230	30	0	1589.1	0.212				-1	 	0	80	668.1877875598843	667.1805110932843	1	668.1873779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13027	5569	18597
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18599	49.475	NaN	9147.5	30	0	843.54	0.106			+	-1	SCETDMCDGHS	11	76	649.7080892637168	1297.4016255942336	2	649.7081909179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_SC(Carbamidomethyl (C))ETDMC(Carbamidomethyl (C))DGHS_	REV__FBN3|p.G1826C|1|0.26|ENSG00000142449|chr19:8096507-8096507|C/A|missense_variant	25.57405402267927	0.7215402271931856	4				NaN	NaN	0	NaN	13028	5569	18597
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18600	49.477	NaN	11414	30	0	1188.4	0.106				-1	 	0	78	661.2074591621891	660.2001826955891	1	661.2059936523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13029	5569	18597
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18601	49.479	NaN	10647	30	0	514.83	0.106				-1	 	0	76	677.2081377338155	676.2008612672155	1	677.203857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13030	5569	18597
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18602	49.481	NaN	2078.9	30	0	750.99	0.106				-1	 	0	63	412.7460343586145	823.477515784029	2	412.74603271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13031	5569	18597
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18603	49.483	NaN	8950.6	30	0	732.82	0.106				-1	FFCYCEQSCYE	11	81	796.7778607560994	1591.5411685789986	2	796.7777099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	3 Carbamidomethyl (C)	_FFC(Carbamidomethyl (C))YC(Carbamidomethyl (C))EQSC(Carbamidomethyl (C))YE_	L1MD2_dup2312|chr3:169838249-169838855:-|1.025247598227015|0.1719973841498203|2.58|473.0|35|2|anti-sense	3.159230865173134	0.869011154517644	4				NaN	NaN	0	NaN	13032	5569	18597
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18604	49.484	NaN	9204.4	30	0	394.91	0.04				-1	MMCMNCDCDFS	11	84	686.6912708833222	NaN	0	686.6909790039062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C),Oxidation (M)	_MMCM(Oxidation (M))NCDC(Carbamidomethyl (C))DFS_	FGD5|p.G1252D|1|0.31|ENSG00000154783|chr3:14922496-14922496|G/A|missense_variant	4.905733101427522	0.456735970842152	4				NaN	NaN	0	NaN	13033	5569	18597
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18611	49.502	NaN	9231.7	30	0	1025.1	0.212			+	-1	GWCGACSEHCV	11	72	633.2286587856617	1264.4427646381232	2	633.7303466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_GWC(Carbamidomethyl (C))GACSEHC(Carbamidomethyl (C))V_	REV__ENSG00000138759|ENST00000512123|FRAS1;REV__FRAS1|p.C3202Afs*11|1|0.32|ENSG00000138759|chr4:78508825-78508825|C/-|frameshift_variant;REV__FRAS1|p.G3456Afs*3|1|0.28|ENSG00000138759|chr4:78515987-78515987|G/-|frameshift_variant;REV__FRAS1|p.P3289Lfs*45|1|0.05|ENSG00000138759|chr4:78511358-78511359|-/T|frameshift_variant;REV__FRAS1|p.V2385Sfs*37|1|0.28|ENSG00000138759|chr4:78466329-78466329|G/-|frameshift_variant;REV__nc|ENSG00000138759|Q86XX4-4|FRAS1;REV__nc|ENSG00000138759|Q86XX4-5|FRAS1;REV__nc|ENSG00000138759|Q86XX4-6|FRAS1;REV__nc|ENSG00000138759|Q86XX4|FRAS1	15.641811463095205	0.7972481940378109	4				NaN	NaN	0	NaN	13037	5572	18610
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18612	49.506	NaN	9591.5	30	0	947.77	0.106				-1	YCFMCKDYVYD	11	86	782.3016296724071	1562.588706411614	2	782.8019409179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_YC(Carbamidomethyl (C))FMC(Carbamidomethyl (C))KDYVYD_	ENSG00000247746|ENST00000500968|USP51	2.718429308559148	0.8743795408415183	4				NaN	NaN	0	NaN	13038	5572	18610
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18613	49.508	NaN	2114.2	30	0	238.25	0.106			+	8593	ECCSEPCDD	9	57	500.63668294558585	999.2588129579717	2	501.1377868652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ECCSEPCDD_	REV__CON__P60413;REV__ENSG00000188155|ENST00000400368|KRTAP10-6;REV__ENSG00000189169|ENST00000400365|KRTAP10-12;REV__ENSG00000205445|ENST00000391621|KRTAP10-2;REV__ENSG00000215454|ENST00000400374|KRTAP10-4;REV__ENSG00000221837|ENST00000397911|KRTAP10-9;REV__ENSG00000241123|ENST00000400372|KRTAP10-5;REV__ENSG00000243489|ENST00000334670|KRTAP10-11;REV__ENSG00000272804|ENST00000609664|KRTAP10-7;REV__KRTAP10-12|p.C41Afs*8|1|0.12|ENSG00000189169|chr21:44697316-44697316|C/-|frameshift_variant;REV__KRTAP10-9|p.C31Afs*13|1|0.58|ENSG00000221837|chr21:44627256-44627256|C/-|frameshift_variant	1.2051539316722666	0.6112419832031293	4				NaN	NaN	0	NaN	13039	5572	18610
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18614	49.51	NaN	7514.3	30	0	441.32	0.106				-1	CCCNCCCGHCQ	11	81	723.686279296875	NaN	0	723.686279296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term),4 Carbamidomethyl (C)	_(Acetyl (Protein N-term))C(Carbamidomethyl (C))C(Carbamidomethyl (C))CNCCC(Carbamidomethyl (C))GHC(Carbamidomethyl (C))Q_	DNAJC5B|p.R141Q|1|0.31|ENSG00000147570|chr8:66080465-66080465|G/A|missense_variant	0.8280856835056912	0.456735970842152	4				NaN	NaN	0	NaN	13040	5572	18610
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18615	49.512	NaN	2326.8	30	0	375.77	0.106				-1	CTCGTLCC	8	57	487.66288773829103	NaN	0	487.662109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	3 Carbamidomethyl (C)	_CTC(Carbamidomethyl (C))GTLC(Carbamidomethyl (C))C(Carbamidomethyl (C))_	APCS|p.K162Sfs*53|1|0.05|ENSG00000132703|chr1:159588520-159588521|-/GCACAGAGTCCCACATGTAC|frameshift_variant	15.63621529709179	1.7418937515398478	4				NaN	NaN	0	NaN	13041	5572	18610
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18616	49.513	NaN	7217.5	30	0	340.52	0.106				-1	NLFFPCWCCCC	11	92	812.2863466563329	NaN	0	812.2847290039062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	5 Carbamidomethyl (C)	_NLFFPC(Carbamidomethyl (C))WC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))_	ENST00000394095.6_1_3:101062560-101062668:-|nuORF	0.9081495309045565	0.456735970842152	4				NaN	NaN	0	NaN	13042	5572	18610
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18617	49.515	NaN	2116.4	30	0	178.42	0.036			+	7034	CSNDDNGDDC	10	58	529.1451344933226	NaN	0	529.1458740234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_CSNDDNGDDC_	REV__ENSG00000145147|ENST00000504154|SLIT2;REV__nc|ENSG00000145147|O94813-2|SLIT2;REV__nc|ENSG00000145147|O94813-3|SLIT2	2.92943323627438	0.4201028297492154	4				NaN	NaN	0	NaN	13043	5572	18610
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18622	49.53	NaN	1401.5	30	0	475.45	0.214	+			7527	DGSEPGESSS	10	39	476.1787065855402	950.3428602378805	2	476.1792907714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DGSEPGESSS_	ENSG00000171044|ENST00000416569|XKR6	15.641811463095205	0.7369665665077569	4				NaN	NaN	0	NaN	13045	5575	18621
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18623	49.533	NaN	8021.4	30	0	541.7	0.106				-1	 	0	76	710.1825561523438	NaN	0	710.1825561523438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13046	5575	18621
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18624	49.535	NaN	1038.6	30	0	232.62	0.106	+			7370	DDNDNHPM	8	39	479.1727183938296	956.3308838544592	2	479.17205810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DDNDNHPM_	PCDHB1|p.R559H|1|0.27|ENSG00000171815|chr5:141053146-141053146|G/A|missense_variant	13.775330524044264	0.789990904165365	4				NaN	NaN	0	NaN	13047	5575	18621
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18625	49.537	NaN	7091.3	30	0	344.28	0.106				-1	 	0	85	753.1771664576576	752.1698899910575	1	753.1746215820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13048	5575	18621
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18626	49.539	NaN	6636.5	30	0	356.77	0.044				-1	 	0	95	841.2789916992188	NaN	0	841.2789916992188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13049	5575	18621
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18630	49.553	NaN	8657.4	30	0	776.83	0.212				-1	 	0	81	661.2074591621891	660.2001826955891	1	661.2063598632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13050	5578	18629
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18631	49.557	NaN	8325.3	30	0	456.63	0.106				-1	 	0	79	698.197698684424	697.190422217824	1	698.19677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13051	5578	18629
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18632	49.559	NaN	4459.5	30	0	511.95	0.106			+	-1	AEDGSDMEIDM	11	74	635.7266662703151	1269.4387796074302	2	635.726806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))AEDGSDM(Oxidation (M))EIDM_	REV__ENSG00000134046|ENST00000256429|MBD2;REV__ENST00000578272.1_1_18:51686149-51714116:-|nuORF	19.1035232394073	0.7810393085260824	4				NaN	NaN	0	NaN	13052	5578	18629
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18633	49.56	NaN	1624.5	30	0	309.09	0.106				-1	NFTGCCCG	8	45	488.159302231679	974.3040515301581	2	488.1589660644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	3 Carbamidomethyl (C)	_NFTGC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))G_	ENST00000505490.2_1_17:79845733-79845814:-|nuORF	13.775330524044264	0.789990904165365	4				NaN	NaN	0	NaN	13053	5578	18629
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18634	49.562	NaN	7880.3	30	0	505.08	0.106			+	-1	FCWFCNCCFGF	11	89	802.7825579851725	1603.550563037145	2	803.2825317382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	4 Carbamidomethyl (C)	_FC(Carbamidomethyl (C))WFC(Carbamidomethyl (C))NC(Carbamidomethyl (C))C(Carbamidomethyl (C))FGF_	REV__L1PA8_dup4178|chr8:94121319-94127043:-|4.057818296907117|0.2856926403965029|3.83|481.0|314|3|anti-sense	2.92943323627438	0.8718097890272747	4				NaN	NaN	0	NaN	13054	5578	18629
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18635	49.564	NaN	2269.6	30	0	237.26	0.106			+	11276	FIVLRAYFRRR	11	54	499.63785052553845	NaN	0	499.63836669921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FIVLRAYFRRR_	REV__ENST00000565493.1_1_20:34637734-34637854:-|nuORF	14.086013023434994	0.456735970842152	4				NaN	NaN	0	NaN	13055	5578	18629
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18636	49.566	NaN	6167.9	30	0	575.78	0.044			+	-1	YCDCEWHWCCG	11	95	816.7595787720379	NaN	0	816.7609252929688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	4 Carbamidomethyl (C)	_YC(Carbamidomethyl (C))DC(Carbamidomethyl (C))EWHWC(Carbamidomethyl (C))C(Carbamidomethyl (C))G_	REV__nc|ENSG00000198788|Q02817|MUC2	0.8280856835056912	0.456735970842152	4				NaN	NaN	0	NaN	13056	5578	18629
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18640	49.58	NaN	7905.2	30	0	459.56	0.211				-1	FGFCCNCFWCF	11	87	802.7825579851725	1603.550563037145	2	802.7816772460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	4 Carbamidomethyl (C)	_FGFC(Carbamidomethyl (C))C(Carbamidomethyl (C))NC(Carbamidomethyl (C))FWC(Carbamidomethyl (C))F_	L1PA8_dup4178|chr8:94121319-94127043:-|4.057818296907117|0.2856926403965029|3.83|481.0|314|3|anti-sense	0.8280856835056912	0.8974014533368192	4				NaN	NaN	0	NaN	13057	5581	18639
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18641	49.583	NaN	7783.8	30	0	660.17	0.106				-1	MCACACMCTCT	11	93	692.6982879091207	NaN	0	692.698974609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	4 Carbamidomethyl (C),Oxidation (M)	_MC(Carbamidomethyl (C))AC(Carbamidomethyl (C))AC(Carbamidomethyl (C))M(Oxidation (M))C(Carbamidomethyl (C))TCT_	ENST00000544665.7_1_16:31343047-31343377:+|nuORF	2.718429308559148	0.456735970842152	4				NaN	NaN	0	NaN	13058	5581	18639
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18642	49.585	NaN	8291.8	30	0	494.78	0.106				-1	 	0	82	730.6858719020895	NaN	0	731.1595458984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13059	5581	18639
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18643	49.587	NaN	7844.1	30	0	411.26	0.106				-1	WFCCCCCCCCC	11	83	725.660571687215	NaN	0	725.6591796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	3 Carbamidomethyl (C)	_WFC(Carbamidomethyl (C))CC(Carbamidomethyl (C))C(Carbamidomethyl (C))CCCCC_	ENST00000606389.5_1_2:69691306-69691378:-|nuORF	11.511019455917149	0.456735970842152	4				NaN	NaN	0	NaN	13060	5581	18639
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18644	49.589	NaN	7657.5	30	0	343.47	0.106				-1	 	0	82	722.1521606445312	NaN	0	722.1521606445312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13061	5581	18639
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18645	49.591	NaN	6290.7	30	0	333.86	0.044				-1	 	0	100	823.7641271410424	NaN	0	823.7642211914062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13062	5581	18639
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18649	49.605	NaN	2543.7	30	0	325.04	0.215			+	-1	CSACPAPGCC	10	57	484.6587732974132	967.3029936616264	2	484.65887451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_CSACPAPGCC(Carbamidomethyl (C))_	REV__nc|ENSG00000184716|A6NH21|SERINC4	16.473147378115264	0.7327422906225664	4				NaN	NaN	0	NaN	13063	5584	18648
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18650	49.609	NaN	8064.5	30	0	545.92	0.106				-1	 	0	79	719.1722252308323	NaN	0	719.1718139648438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13064	5584	18648
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18651	49.611	NaN	7376.4	30	0	331.29	0.106				-1	 	0	82	713.1793654687993	712.1720890021993	1	714.1798095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13065	5584	18648
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18652	49.612	NaN	7017.5	30	0	325.29	0.106				-1	 	0	87	741.1926467349623	NaN	0	741.1925659179688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13066	5584	18648
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18653	49.614	NaN	4973.4	30	0	279.84	0.106				-1	 	0	78	759.6821899414062	NaN	0	759.6821899414062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13067	5584	18648
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18654	49.616	NaN	2127.6	30	0	256.09	0.037			+	-1	CCHCCPCCC	9	54	573.1319068460311	NaN	0	573.131591796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	3 Carbamidomethyl (C)	_CCHCCPC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))_	REV__ENSG00000197191|ENST00000650725|CYSRT1	8.822329726475273	0.4071219895973803	4				NaN	NaN	0	NaN	13068	5584	18648
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18660	49.632	NaN	6102.8	30	0	403.78	0.211			+	-1	CCYWENQCRSC	11	91	811.786376953125	NaN	0	811.786376953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	4 Carbamidomethyl (C)	_C(Carbamidomethyl (C))C(Carbamidomethyl (C))YWENQC(Carbamidomethyl (C))RSC(Carbamidomethyl (C))_	REV__ENSG00000004838|ENST00000231749|ZMYND10;REV__ENST00000475688.1_1_3:50378843-50379883:-|nuORF;REV__nc|ENSG00000004838|O75800-2|ZMYND10	0.7557082228359009	0.456735970842152	4				NaN	NaN	0	NaN	13071	5587	18659
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18661	49.636	NaN	6057.1	30	0	397.66	0.106				-1	MRRCYCHCCCP	11	93	830.293282786966	NaN	0	830.2940063476562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	5 Carbamidomethyl (C)	_MRRC(Carbamidomethyl (C))YC(Carbamidomethyl (C))HC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))P_	ENST00000353836.9_1_19:51920668-51920960:-|nuORF;ENST00000357375.4_1_19:51920198-51920960:-|nuORF	9.705651100619752	0.456735970842152	4				NaN	NaN	0	NaN	13072	5587	18659
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18662	49.637	NaN	1177.2	30	0	433.44	0.106				-1	MCPTPGSPQ	9	35	467.19298568707666	NaN	0	467.1927795410156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))CPTPGSPQ_	ENST00000462326.5_1_7:55503792-55560013:-|nuORF	29.14955571784316	0.3303970763161698	4				NaN	NaN	0	NaN	13073	5587	18659
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18663	49.639	NaN	1789.8	30	0	133.37	0.036				-1	 	0	40	550.1294259381789	NaN	0	550.130615234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13074	5587	18659
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18668	49.654	NaN	6374.4	30	0	337.52	0.211				-1	 	0	79	716.1593627929688	NaN	0	716.1593627929688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13076	5590	18667
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18669	49.657	NaN	1836.4	30	0	144.49	0.106	+			25405	LPKTIHTTP	9	60	336.5342593352082	NaN	0	336.5343933105469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LPKTIHTTP_	ENSG00000181143|ENST00000397910|MUC16;MUC16|p.F10843Sfs*11|1|0.22|ENSG00000181143|chr19:8938427-8938427|A/-|frameshift_variant;MUC16|p.L8270Wfs*63|1|0.04|ENSG00000181143|chr19:8951962-8951963|-/ACCA|frameshift_variant;MUC16|p.N9430Tfs*13|1|0.14|ENSG00000181143|chr19:8948481-8948481|T/-|frameshift_variant;MUC16|p.S7713Lfs*5|1|0.45|ENSG00000181143|chr19:8953634-8953634|G/-|frameshift_variant;MUC16|p.T7968Nfs*2|1|0.41|ENSG00000181143|chr19:8952867-8952868|-/T|frameshift_variant;MUC16|p.T8791Qfs*38|1|0.31|ENSG00000181143|chr19:8950403-8950403|G/-|frameshift_variant	31.954861631926434	0.3162336699109506	4				NaN	NaN	0	NaN	13077	5590	18667
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18670	49.659	NaN	6823.8	30	0	377.55	0.106				-1	 	0	85	726.1648941242232	NaN	0	726.1633911132812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13078	5590	18667
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18671	49.661	NaN	6904.7	30	0	491.91	0.106				-1	 	0	76	707.6515942937307	NaN	0	707.7056274414062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13079	5590	18667
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18672	49.663	NaN	6062	30	0	301.87	0.106				-1	 	0	95	823.7641271410424	NaN	0	823.7637939453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13080	5590	18667
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18673	49.664	NaN	6811.2	30	0	343.34	0.106				-1	 	0	83	744.6658657632797	NaN	0	744.6658325195312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13081	5590	18667
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18674	49.666	NaN	7373.2	30	0	311.21	0.041				-1	 	0	79	733.6614278643702	NaN	0	733.66259765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13082	5590	18667
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18679	49.681	NaN	39254	30	0	4218	0.214				-1	 	0	99	384.2353438032308	766.4561346732617	2	384.73712158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13084	5593	18678
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18680	49.685	NaN	10480	30	0	429.81	0.106			+	-1	CCDHTQCCWDM	11	85	701.703232696319	NaN	0	701.703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))CCDHTQCCWDM(Oxidation (M))_	REV__PLA2G2D|p.T60M|1|0.1|ENSG00000117215|chr1:20116339-20116339|G/A|missense_variant	0.8280856835056912	0.456735970842152	4				NaN	NaN	0	NaN	13085	5593	18678
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18681	49.687	NaN	956.39	30	0	98.388	0.106				-1	 	0	44	362.22216288906344	722.4297728449269	2	362.221923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13086	5593	18678
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18682	49.688	NaN	6562.3	30	0	328.15	0.106				-1	 	0	83	829.2392846976078	NaN	0	829.2401733398438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13087	5593	18678
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18683	49.69	NaN	6880.8	30	0	642.4	0.106				-1	 	0	83	810.2768814098915	NaN	0	810.2774658203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13088	5593	18678
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18684	49.692	NaN	7348.6	30	0	238.92	0.106				-1	 	0	82	743.1687622070312	NaN	0	743.1687622070312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13089	5593	18678
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18685	49.694	NaN	6985.5	30	0	306.2	0.042				-1	 	0	79	762.1614379882812	NaN	0	762.1614379882812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13090	5593	18678
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18690	49.708	NaN	10304	30	0	583.27	0.211				-1	EQNCCEECCCQ	11	82	674.6920679540234	NaN	0	674.6932983398438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_EQNCCEEC(Carbamidomethyl (C))CCQ_	ENSG00000186860|ENST00000334202|KRTAP17-1	5.220141733780809	0.456735970842152	4				NaN	NaN	0	NaN	13092	5596	18689
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18691	49.712	NaN	1637.5	30	0	633.71	0.106	+			1904	AIPKAAIT	8	48	392.7488682999159	NaN	0	392.74884033203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AIPKAAIT_	USH2A|p.R551Ffs*46|1|0.11|ENSG00000042781|chr1:216292364-216292365|-/ATCACACTAGAACAAAA|frameshift_variant	25.450171626174864	1.7418937515398478	4				NaN	NaN	0	NaN	13093	5596	18689
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18692	49.714	NaN	3389.1	30	0	231.48	0.106			+	-1	ERMDMPMNSD	10	69	637.2270110986425	1272.439469264085	2	637.2299194335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	3 Oxidation (M)	_ERM(Oxidation (M))DM(Oxidation (M))PM(Oxidation (M))NSD_	REV__ENSG00000198734|ENST00000367797|F5	32.81241826257853	0.6118718159329168	4				NaN	NaN	0	NaN	13094	5596	18689
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18693	49.716	NaN	7423.1	30	0	201.29	0.106				-1	 	0	80	753.1771664576576	752.1698899910575	1	753.1722412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13095	5596	18689
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18694	49.717	NaN	6351.3	30	0	269.72	0.106			+	-1	CFCCCCCFCCC	11	82	763.174560546875	NaN	0	763.174560546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	5 Carbamidomethyl (C)	_C(Carbamidomethyl (C))FC(Carbamidomethyl (C))C(Carbamidomethyl (C))CCCFCC(Carbamidomethyl (C))C(Carbamidomethyl (C))_	REV__ENSG00000163793|ENST00000296097|DNAJC5G	3.159230865173134	0.456735970842152	4				NaN	NaN	0	NaN	13096	5596	18689
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18695	49.719	NaN	8277.5	30	0	442.08	0.041				-1	 	0	82	735.6694946289062	NaN	0	735.6694946289062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13097	5596	18689
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18702	49.737	NaN	16995	30	0	4854	0.213				-1	 	0	79	621.2489589471901	1240.48336496118	2	621.2488403320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13101	5599	18701
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18703	49.741	NaN	8682.4	30	0	834.69	0.106			+	-1	HCQCMCSSNY	10	78	653.2094352167251	1304.40431750025	2	653.7097778320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C),Oxidation (M)	_HC(Carbamidomethyl (C))QC(Carbamidomethyl (C))M(Oxidation (M))CSSNY_	REV__ENST00000445430.5_1_3:195412816-195412894:+|nuORF	16.473147378115264	0.7327422906225664	4				NaN	NaN	0	NaN	13102	5599	18701
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18704	49.743	NaN	3778.2	30	0	472.4	0.106			+	-1	NKGCMWCHF	9	67	628.2433779587564	1254.4722029843126	2	628.2430419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C),Oxidation (M)	_NKGC(Carbamidomethyl (C))M(Oxidation (M))WC(Carbamidomethyl (C))HF_	REV__ENSG00000122299|ENST00000355758|ZC3H7A;REV__nc|ENSG00000122299|Q8IWR0-2|ZC3H7A	13.775330524044264	0.6112419832031292	4				NaN	NaN	0	NaN	13103	5599	18701
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18705	49.745	NaN	6328.6	30	0	1055.6	0.106			+	-1	MDTCCYEER	9	72	640.2232400626696	1278.431927192139	2	640.7242431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))DTC(Carbamidomethyl (C))C(Carbamidomethyl (C))YEER_	REV__ENST00000473270.1_1_9:33016066-33016174:-|nuORF	24.20275056022122	0.577060078256802	4				NaN	NaN	0	NaN	13104	5599	18701
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18706	49.746	NaN	10845	30	0	455.6	0.106			+	-1	CCDHTQCCWDM	11	80	701.703232696319	NaN	0	701.7024536132812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))CCDHTQCCWDM(Oxidation (M))_	REV__PLA2G2D|p.T60M|1|0.1|ENSG00000117215|chr1:20116339-20116339|G/A|missense_variant	2.92943323627438	0.456735970842152	4				NaN	NaN	0	NaN	13105	5599	18701
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18707	49.748	NaN	1645.6	30	0	167.4	0.106			+	-1	CVSCTFCM	8	44	483.66298015052155	965.3114073678431	2	483.6629333496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),Oxidation (M)	_CVSC(Carbamidomethyl (C))TFCM(Oxidation (M))_	REV__BIRC6|p.A1071Lfs*23|1|0.39|ENSG00000115760|chr2:32431053-32431053|G/-|frameshift_variant;REV__BIRC6|p.I2261Yfs*13|1|0.3|ENSG00000115760|chr2:32476268-32476268|A/-|frameshift_variant;REV__BIRC6|p.I914Yfs*2|1|0.07|ENSG00000115760|chr2:32416027-32416027|A/-|frameshift_variant;REV__BIRC6|p.K3585Sfs*8|1|0.32|ENSG00000115760|chr2:32515171-32515171|A/-|frameshift_variant;REV__BIRC6|p.M418Nfs*8|1|0.25|ENSG00000115760|chr2:32401379-32401380|-/A|frameshift_variant;REV__BIRC6|p.P1736Qfs*17|1|0.37|ENSG00000115760|chr2:32464770-32464770|C/-|frameshift_variant;REV__BIRC6|p.R1406Dfs*3|1|0.35|ENSG00000115760|chr2:32442431-32442431|C/-|frameshift_variant;REV__BIRC6|p.S2648Ffs*25|1|0.08|ENSG00000115760|chr2:32487769-32487770|-/T|frameshift_variant;REV__BIRC6|p.S3504Mfs*5|1|0.15|ENSG00000115760|chr2:32513095-32513098|TAGT/-|frameshift_variant;REV__BIRC6|p.T1339Qfs*21|1|0.44|ENSG00000115760|chr2:32442131-32442131|A/-|frameshift_variant;REV__ENSG00000115760|ENST00000421745|BIRC6	14.664097394203935	0.7913966407026132	4				NaN	NaN	0	NaN	13106	5599	18701
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18708	49.75	NaN	6476.4	30	0	253.59	0.044				-1	 	0	93	823.2657470703125	NaN	0	823.2657470703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13107	5599	18701
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18713	49.765	NaN	9412.6	30	0	941.15	0.212				-1	NDMNCNDDGHS	11	75	647.7073236477961	1293.400094362392	2	648.2080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_NDM(Oxidation (M))NC(Carbamidomethyl (C))NDDGHS_	ENSG00000151322|ENST00000356141|NPAS3;nc|ENSG00000151322|Q8IXF0-2|NPAS3;nc|ENSG00000151322|Q8IXF0-3|NPAS3;nc|ENSG00000151322|Q8IXF0-4|NPAS3;NPAS3|p.L707Cfs*103|1|0.35|ENSG00000151322|chr14:33800420-33800420|G/-|frameshift_variant	16.71738777980365	0.7922119881075679	4				NaN	NaN	0	NaN	13109	5602	18712
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18714	49.768	NaN	10942	30	0	643.45	0.106				-1	HCYFDDDCET	10	70	681.2223745619067	1360.4301961906133	2	681.2229614257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_HC(Carbamidomethyl (C))YFDDDC(Carbamidomethyl (C))ET_	ENSG00000204186|ENST00000374423|ZDBF2;ZDBF2|p.L2270*|1|0.42|ENSG00000204186|chr2:206311334-206311334|T/-|frameshift_variant	10.865556482863946	0.761236200923858	4				NaN	NaN	0	NaN	13110	5602	18712
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18715	49.77	NaN	1961.9	30	0	540.47	0.106			+	-1	PMPMGVMM	8	44	471.183898015739	940.353243098278	2	471.18328857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	3 Oxidation (M)	_PM(Oxidation (M))PM(Oxidation (M))GVMM(Oxidation (M))_	REV__ENSG00000112305|ENST00000370455|SMAP1;REV__nc|ENSG00000112305|Q8IYB5-2|SMAP1;REV__nc|ENSG00000112305|Q8IYB5-3|SMAP1	24.504012794735996	0.7701314986472447	4				NaN	NaN	0	NaN	13111	5602	18712
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18716	49.772	NaN	8697.2	30	0	590.71	0.106			+	-1	QYCCCCLCSQ	10	77	691.2255017178542	1380.4364505025083	2	691.22509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	4 Carbamidomethyl (C)	_QYCC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))LC(Carbamidomethyl (C))SQ_	REV__ENSG00000151617|ENST00000651419|EDNRA;REV__nc|ENSG00000151617|P25101-4|EDNRA;REV__nc|ENSG00000151617|P25101-5|EDNRA	13.45404412870281	0.7480832915596971	4				NaN	NaN	0	NaN	13112	5602	18712
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18717	49.774	NaN	7605.1	30	0	371.66	0.106				-1	FGFCCNCFWCF	11	93	802.7825579851725	1603.550563037145	2	802.7802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	4 Carbamidomethyl (C)	_FGFC(Carbamidomethyl (C))C(Carbamidomethyl (C))NC(Carbamidomethyl (C))FWC(Carbamidomethyl (C))F_	L1PA8_dup4178|chr8:94121319-94127043:-|4.057818296907117|0.2856926403965029|3.83|481.0|314|3|anti-sense	0	0.9074864536995126	4				NaN	NaN	0	NaN	13113	5602	18712
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18718	49.776	NaN	6678.8	30	0	427.8	0.106				-1	CQCCPHSCCC	10	79	686.1925041116448	NaN	0	686.1913452148438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	5 Carbamidomethyl (C)	_C(Carbamidomethyl (C))QC(Carbamidomethyl (C))CPHSC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))_	ENSG00000143195|ENST00000271417|ILDR2	10.865556482863946	0.4201028297492154	4				NaN	NaN	0	NaN	13114	5602	18712
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18719	49.777	NaN	6905.6	30	0	451.84	0.041				-1	 	0	72	726.1598958516349	NaN	0	726.1622314453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13115	5602	18712
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18727	49.797	NaN	7682.7	30	0	838.22	0.211			+	-1	GKCYWFCCFCF	11	84	789.2954396767909	1576.5763264203817	2	789.294189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	3 Carbamidomethyl (C)	_GKC(Carbamidomethyl (C))YWFC(Carbamidomethyl (C))C(Carbamidomethyl (C))FCF_	REV__ENST00000555736.1_1_14:65714419-65769374:-|nuORF	2.92943323627438	0.8718097890272747	4				NaN	NaN	0	NaN	13120	5605	18726
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18728	49.801	NaN	7794.4	30	0	346.71	0.106				-1	 	0	79	734.1627593940511	NaN	0	734.1622314453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13121	5605	18726
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18729	49.803	NaN	9387	30	0	609.11	0.106				-1	 	0	74	706.1811730910321	705.173896624432	1	707.6529541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13122	5605	18726
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18730	49.804	NaN	6598.2	30	0	254.4	0.106				-1	 	0	95	835.7424656602235	NaN	0	835.743408203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13123	5605	18726
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18731	49.806	NaN	7112.5	30	0	438.45	0.044				-1	 	0	90	829.2458577706859	NaN	0	829.2398681640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13124	5605	18726
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18738	49.826	NaN	6851.4	30	0	1383.9	0.213				-1	 	0	67	621.2489589471901	1240.48336496118	2	621.2490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13128	5608	18737
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18739	49.829	NaN	7276.9	30	0	633.3	0.106				-1	 	0	77	677.2081377338155	676.2008612672155	1	677.2034912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13129	5608	18737
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18740	49.833	NaN	6099.4	30	0	553.47	0.106				-1	WGMFCCCCYC	10	74	674.6920679540234	NaN	0	674.6931762695312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C),Oxidation (M)	_WGM(Oxidation (M))FC(Carbamidomethyl (C))C(Carbamidomethyl (C))CCYC_	ENST00000494000.1_1_3:172048292-172052928:+|nuORF	3.6843469609004	0.4201028297492154	4				NaN	NaN	0	NaN	13130	5608	18737
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18741	49.835	NaN	4415.8	30	0	333.22	0.106	+			7816	DPSDATPSFED	11	69	590.7356355260334	1179.4567181188668	2	590.73583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DPSDATPSFED_	ENSG00000130997|ENST00000511885|POLN;ENST00000515357.5_1_4:2158125-2230958:-|nuORF;nc|ENSG00000130997|Q7Z5Q5-3|POLN	27.882242232435846	0.6973292152807183	4				NaN	NaN	0	NaN	13131	5608	18737
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18742	49.836	NaN	7369.5	30	0	426	0.043				-1	QMRCCCCCRVC	11	89	796.7778607560994	1591.5411685789986	2	797.779541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	5 Carbamidomethyl (C)	_QMRC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))CC(Carbamidomethyl (C))RVC(Carbamidomethyl (C))_	ENSG00000157765|ENST00000382051|SLC34A2;nc|ENSG00000157765|O95436-2|SLC34A2	5.55782384252955	0.84446477687463	4				NaN	NaN	0	NaN	13132	5608	18737
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18748	49.853	NaN	3163.4	30	0	599.75	0.213			+	-1	CVCVCVCVCMS	11	50	611.2178002795807	1220.4210476259614	2	611.2182006835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_CVCVCVCVC(Carbamidomethyl (C))M(Oxidation (M))S_	REV__ENST00000586222.1_3_18:13382561-13382669:+|nuORF	15.641811463095205	0.7972481940378109	4				NaN	NaN	0	NaN	13135	5611	18747
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18749	49.857	NaN	8923.5	30	0	393.54	0.106			+	-1	HEEMFMMIWDF	11	93	782.3016296724071	1562.588706411614	2	782.8012084960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	3 Oxidation (M)	_HEEM(Oxidation (M))FM(Oxidation (M))M(Oxidation (M))IWDF_	REV__ENSG00000163625|ENST00000295888|WDFY3;REV__nc|ENSG00000163625|Q8IZQ1-2|WDFY3;REV__WDFY3|p.L1842Yfs*10|1|0.19|ENSG00000163625|chr4:84755300-84755300|A/-|frameshift_variant	2.92943323627438	0.8718097890272747	4				NaN	NaN	0	NaN	13136	5611	18747
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18750	49.859	NaN	1725.5	30	0	206.75	0.106				-1	NCEDMDEC	8	41	500.63668294558585	999.2588129579717	2	500.6381530761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))NCEDMDEC_	ENSG00000166147|ENST00000316623|FBN1;FBN1|p.R579G|1|0.38|ENSG00000166147|chr15:48508684-48508684|T/C|missense_variant	4.316272785109212	0.7769738875864834	4				NaN	NaN	0	NaN	13137	5611	18747
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18751	49.861	NaN	6656.3	30	0	308.96	0.106				-1	 	0	81	713.6798756754779	NaN	0	713.679443359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13138	5611	18747
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18752	49.862	NaN	5854.7	30	0	482.1	0.106				-1	MFCCCCYCF	9	78	683.6944684966622	NaN	0	683.6968383789062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	4 Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))FC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))YCF_	ENST00000494000.1_1_3:172048292-172052928:+|nuORF	4.316272785109212	0.4072763090772754	4				NaN	NaN	0	NaN	13139	5611	18747
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18753	49.864	NaN	3588.7	30	0	310.16	0.106			+	42047	SWNGHTPCPDS	11	64	600.7390540391712	1199.4635551451422	2	601.2404174804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SWNGHTPCPDS_	REV__ENSG00000143341|ENST00000271588|HMCN1;REV__HMCN1|p.S4801Rfs*11|1|0.07|ENSG00000143341|chr1:186145536-186145537|-/AGAATAA|frameshift_variant;REV__nc|ENSG00000143341|Q96RW7-2|HMCN1	33.921630207806714	0.6339809607503234	4				NaN	NaN	0	NaN	13140	5611	18747
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18754	49.866	NaN	1753.1	30	0	174.11	0.036			+	-1	CCSDPCGC	8	45	529.1451344933226	NaN	0	529.1456909179688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term),4 Carbamidomethyl (C)	_(Acetyl (Protein N-term))C(Carbamidomethyl (C))C(Carbamidomethyl (C))SDPC(Carbamidomethyl (C))GC(Carbamidomethyl (C))_	REV__ENST00000369927.8_1_20:62496636-62500742:+|nuORF	1.619023411512541	1.741893751539848	4				NaN	NaN	0	NaN	13141	5611	18747
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18765	49.892	NaN	7149.6	30	0	568.23	0.212			+	-1	RPHDEGCFCC	10	69	633.2286587856617	1264.4427646381232	2	633.2301635742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))RPHDEGCFC(Carbamidomethyl (C))C_	REV__ENSG00000169297|ENST00000378970|NR0B1;REV__nc|ENSG00000169297|P51843-2|NR0B1;REV__NR0B1|p.R131H|1|0.25|ENSG00000169297|chrX:30308972-30308972|C/T|missense_variant	21.9598887501803	0.7004979571547932	4				NaN	NaN	0	NaN	13149	5614	18764
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18766	49.896	NaN	11231	30	0	1327.5	0.106			+	-1	CRMCMTVMKDR	11	82	739.807633356946	1477.6007137806919	2	739.8058471679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),3 Oxidation (M)	_C(Carbamidomethyl (C))RM(Oxidation (M))CM(Oxidation (M))TVM(Oxidation (M))KDR_	REV__ENSG00000146192|ENST00000274963|FGD2;REV__ENST00000464083.5_1_6:36982408-36995936:+|nuORF;REV__ENST00000487920.1_1_6:36989957-36995408:+|nuORF;REV__ENST00000493635.1_1_6:36982749-36990230:+|nuORF;REV__ENST00000494343.5_1_6:36981367-36995936:+|nuORF;REV__FGD2|p.K560Qfs*14|1|0.4|ENSG00000146192|chr6:37027495-37027496|-/G|frameshift_variant;REV__nc|ENSG00000146192|Q7Z6J4-2|FGD2;REV__nc|ENSG00000146192|Q7Z6J4-4|FGD2	19.1035232394073	0.7810393085260824	4				NaN	NaN	0	NaN	13150	5614	18764
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18767	49.898	NaN	9831	30	0	557.1	0.106				-1	 	0	81	698.197698684424	697.190422217824	1	698.1991577148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13151	5614	18764
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18768	49.899	NaN	6729.7	30	0	527.62	0.106				-1	 	0	78	717.1710815429688	NaN	0	717.1710815429688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13152	5614	18764
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18769	49.901	NaN	4290.6	30	0	354.75	0.106			+	-1	AEDGSDMEIDM	11	73	635.7266662703151	1269.4387796074302	2	635.7274169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))AEDGSDM(Oxidation (M))EIDM_	REV__ENSG00000134046|ENST00000256429|MBD2;REV__ENST00000578272.1_1_18:51686149-51714116:-|nuORF	19.996771675451527	0.7768568223548057	4				NaN	NaN	0	NaN	13153	5614	18764
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18770	49.903	NaN	7443.6	30	0	278.8	0.106				-1	 	0	87	792.7459716796875	NaN	0	792.7459716796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13154	5614	18764
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18771	49.905	NaN	7532.9	30	0	331.58	0.044				-1	 	0	91	815.6336669921875	NaN	0	815.6336669921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13155	5614	18764
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18777	49.921	NaN	4036.7	30	0	376.55	0.212			+	-1	CWRCCCCCCA	10	61	662.6866225562738	NaN	0	662.6846923828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	3 Carbamidomethyl (C)	_CWRCCC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))CA_	REV__ENST00000519715.1_1_5:140012405-140013200:-|nuORF	6.735540347417125	0.42010282974921537	4				NaN	NaN	0	NaN	13158	5617	18776
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18778	49.925	NaN	7567.6	30	0	423.57	0.106				-1	CHFLMENCPCC	11	86	772.2684936523438	NaN	0	772.2684936523438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	4 Carbamidomethyl (C),Oxidation (M)	_C(Carbamidomethyl (C))HFLM(Oxidation (M))ENC(Carbamidomethyl (C))PC(Carbamidomethyl (C))C(Carbamidomethyl (C))_	ENST00000344922.9_2_1:222818951-222822178:+|nuORF;ENST00000470521.1_1_1:222818951-222819032:+|nuORF	12.811709888998246	0.456735970842152	4				NaN	NaN	0	NaN	13159	5617	18776
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18779	49.927	NaN	7289.2	30	0	509.73	0.041				-1	 	0	72	705.685302734375	NaN	0	705.685302734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13160	5617	18776
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18783	49.941	NaN	6141.2	30	0	395.33	0.211			+	30353	PUEUKKAQNKU	11	86	698.199951171875	NaN	0	698.199951171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PUEUKKAQNKU_	REV__ENSG00000250722|ENST00000514985|SELENOP	14.137123925751023	0.456735970842152	4				NaN	NaN	0	NaN	13161	5620	18782
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18784	49.945	NaN	4533.2	30	0	317.8	0.106				-1	 	0	83	678.1653136712956	677.1580372046956	1	678.168212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13162	5620	18782
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18785	49.947	NaN	6261.6	30	0	326.42	0.106				-1	 	0	77	749.1369018554688	NaN	0	749.1369018554688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13163	5620	18782
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18786	49.949	NaN	5971.4	30	0	319.93	0.106				-1	HLSCFCCCVCE	11	86	766.2679443359375	NaN	0	766.2679443359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	5 Carbamidomethyl (C)	_HLSC(Carbamidomethyl (C))FC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))VC(Carbamidomethyl (C))E_	ENSG00000162761|ENST00000342310|LMX1A;LMX1A|p.S344Kfs*5|1|0.06|ENSG00000162761|chr1:165204000-165204001|-/TTTT|frameshift_variant	5.921104790170933	0.456735970842152	4				NaN	NaN	0	NaN	13164	5620	18782
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18787	49.951	NaN	5384.7	30	0	388.98	0.106				-1	 	0	82	706.1795043945312	NaN	0	706.1795043945312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13165	5620	18782
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18788	49.952	NaN	7309.2	30	0	470.4	0.041				-1	 	0	83	727.6592943796807	NaN	0	727.6611938476562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13166	5620	18782
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18793	49.967	NaN	5213.8	30	0	560.31	0.212				-1	 	0	71	661.2074591621891	660.2001826955891	1	661.205810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13168	5623	18792
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18794	49.971	NaN	6082.4	30	0	338.78	0.106				-1	CCNCCCGHCQP	11	82	671.1870727539062	NaN	0	671.1870727539062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	3 Carbamidomethyl (C)	_C(Carbamidomethyl (C))C(Carbamidomethyl (C))NC(Carbamidomethyl (C))CCGHCQP_	DNAJC5B|p.R141Q|1|0.31|ENSG00000147570|chr8:66080465-66080465|G/A|missense_variant	5.921104790170933	0.456735970842152	4				NaN	NaN	0	NaN	13169	5623	18792
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18795	49.973	NaN	7777.3	30	0	702.02	0.04				-1	 	0	74	685.1632080078125	NaN	0	685.1632080078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13170	5623	18792
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18801	49.989	NaN	7818	30	0	646.7	0.212				-1	DNSSDTEMEDM	11	70	653.2094352167251	1304.40431750025	2	653.2113647460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_DNSSDTEM(Oxidation (M))EDM(Oxidation (M))_	ENSG00000173889|ENST00000495893|PHC3;nc|ENSG00000173889|Q8NDX5-2|PHC3;nc|ENSG00000173889|Q8NDX5|PHC3	18.262085536374414	0.7849791996189919	4				NaN	NaN	0	NaN	13173	5626	18800
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18802	49.993	NaN	7900.8	30	0	428.3	0.106			+	-1	HYCQQCQCMDS	11	79	681.2223745619067	1360.4301961906133	2	680.6669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_HYCQQCQCM(Oxidation (M))DS_	REV__ENST00000318266.9_1_20:2936298-2945537:+|nuORF;REV__ENST00000380393.7_1_20:2903898-2945537:+|nuORF;REV__ENST00000431048.5_1_20:2854325-2945537:+|nuORF	18.262085536374414	0.7849791996189919	4				NaN	NaN	0	NaN	13174	5626	18800
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18803	49.995	NaN	7738.3	30	0	612.52	0.106			+	-1	WCCSSCECMSE	11	78	699.2011108398438	NaN	0	699.2011108398438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C),Oxidation (M)	_WC(Carbamidomethyl (C))C(Carbamidomethyl (C))SSCECM(Oxidation (M))SE_	REV__ENST00000498611.5_1_22:50657800-50659866:-|nuORF	2.718429308559148	0.456735970842152	4				NaN	NaN	0	NaN	13175	5626	18800
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18804	49.997	NaN	7543.6	30	0	388.24	0.043				-1	 	0	84	781.6420288085938	NaN	0	781.6420288085938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13176	5626	18800
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18809	50.012	NaN	1916.9	30	0	304.65	0.214	+			34982	SAAPRPPRR	9	62	336.5342593352082	NaN	0	336.5343017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAAPRPPRR_	SOX9|p.P307Cfs*77|1|0.27|ENSG00000125398|chr17:72123772-72123773|-/GT|frameshift_variant;SOX9|p.V291Afs*92|1|0.55|ENSG00000125398|chr17:72123729-72123729|T/-|frameshift_variant;SOX9|p.V306Cfs*77|2|0.32|ENSG00000125398|chr17:72123769-72123769|G/-|frameshift_variant	24.20275056022122	0.35506675290109213	4				NaN	NaN	0	NaN	13178	5629	18808
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18810	50.015	NaN	5988.3	30	0	597.94	0.106			+	-1	ECMCLCMCTH	10	75	660.2016958048431	NaN	0	660.2023315429688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C),2 Oxidation (M)	_ECM(Oxidation (M))CLC(Carbamidomethyl (C))M(Oxidation (M))C(Carbamidomethyl (C))TH_	REV__ENST00000278426.7_2_11:57252034-57252334:-|nuORF	10.865556482863946	0.4201028297492154	4				NaN	NaN	0	NaN	13179	5629	18808
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18811	50.017	NaN	6800.4	30	0	572.78	0.106				-1	 	0	84	728.1629638671875	NaN	0	728.1629638671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13180	5629	18808
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18812	50.019	NaN	1459.5	30	0	134.28	0.106			+	-1	ACTCCAHC	8	48	491.6522093007815	NaN	0	491.65130615234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	3 Carbamidomethyl (C)	_AC(Carbamidomethyl (C))TC(Carbamidomethyl (C))CAHC(Carbamidomethyl (C))_	REV__ENST00000314728.9_1_17:19239740-19240025:+|nuORF	15.63621529709179	1.7418937515398478	4				NaN	NaN	0	NaN	13181	5629	18808
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18813	50.021	NaN	4394.3	30	0	492.95	0.106			+	-1	DCPCNCDDGME	11	63	637.6741017068571	NaN	0	637.6725463867188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C),Oxidation (M)	_DC(Carbamidomethyl (C))PCNCDDGM(Oxidation (M))E_	REV__ENSG00000135272|ENST00000393486|MDFIC;REV__ENST00000431629.5_2_7:114654517-114655986:+|nuORF;REV__nc|ENSG00000135272|Q9P1T7-1|MDFIC	0.8280856835056912	0.456735970842152	4				NaN	NaN	0	NaN	13182	5629	18808
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18814	50.023	NaN	5992.1	30	0	392.33	0.106				-1	 	0	76	664.1874860088121	663.1802095422121	1	664.1846923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13183	5629	18808
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18815	50.024	NaN	5870.5	30	0	192.34	0.044				-1	 	0	95	843.1085815429688	NaN	0	843.1085815429688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13184	5629	18808
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18820	50.039	NaN	4477.6	30	0	372.52	0.211				-1	 	0	80	686.1704890255672	NaN	0	686.17333984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13186	5632	18819
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18821	50.043	NaN	4989.8	30	0	463.8	0.04				-1	CQCCPHTCCC	10	80	693.2037963867188	NaN	0	693.2037963867188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	5 Carbamidomethyl (C)	_CQC(Carbamidomethyl (C))C(Carbamidomethyl (C))PHTC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))_	ENSG00000105699|ENST00000605618|LSR;LSR|p.S424Qfs*10|1|0.5|ENSG00000105699|chr19:35266941-35266942|-/C|frameshift_variant;nc|ENSG00000105699|Q86X29-2|LSR;nc|ENSG00000105699|Q86X29-3|LSR;nc|ENSG00000105699|Q86X29-4|LSR;nc|ENSG00000105699|Q86X29|LSR	3.159230865173134	0.4201028297492154	4				NaN	NaN	0	NaN	13187	5632	18819
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18830	50.076	NaN	4873.8	30	0	274.95	0.148				-1	 	0	83	792.1552379271152	NaN	0	792.1575317382812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13190	5638	18829
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18847	50.146	NaN	4326	30	0	440.96	0.145			+	-1	MEEDDDEMHE	10	71	648.2078980158841	NaN	0	648.2073974609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_MEEDDDEM(Oxidation (M))HE_	REV__ENSG00000197506|ENST00000376238|SLC28A3;REV__SLC28A3|p.S494Ffs*21|1|0.4|ENSG00000197506|chr9:84285511-84285512|-/A|frameshift_variant	14.864876125193954	0.4201028297492154	4				NaN	NaN	0	NaN	13195	5650	18846
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18889	50.349	NaN	1982.2	30	0	269.83	0.143	+			35525	SAVGHVLGRL	10	61	336.8686404257491	NaN	0	336.8691101074219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAVGHVLGRL_	sp|F5HIG1|HEPA_HCMVMDNAhelicase/primasecomplex-associatedproteinOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL102PE=3SV=1;sp|P16827|HEPA_HCMVADNAhelicase/primasecomplex-associatedproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL102PE=2SV=2	28.081489160057373	0.40797012399963245	4				NaN	NaN	0	NaN	13201	5686	18888
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18927	50.529	NaN	3636.7	30	0	205.27	0.141			+	33838	RRAPPPSA	8	73	426.24583442747075	850.4771159217415	2	426.245849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RRAPPPSA_	REV__ENSG00000106948|ENST00000374088|AKNA;REV__nc|ENSG00000106948|Q7Z591-2|AKNA;REV__nc|ENSG00000106948|Q7Z591-4|AKNA;REV__nc|ENSG00000106948|Q7Z591-5|AKNA;REV__nc|ENSG00000106948|Q7Z591-7|AKNA;REV__nc|ENSG00000106948|Q7Z591-8|AKNA	20.481830146152948	0.8005983782650069	4				NaN	NaN	0	NaN	13206	5719	18926
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18957	50.676	NaN	1584.8	30	0	263.15	0.141			+	30382	PVPLVKES	8	43	434.75896838077495	NaN	0	434.7589416503906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PVPLVKES_	REV__ENSG00000072858|ENST00000264852|SIDT1;REV__nc|ENSG00000072858|Q9NXL6-2|SIDT1	21.70233525837049	1.7418937515398478	4				NaN	NaN	0	NaN	13209	5746	18956
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18964	50.708	NaN	1766.8	30	0	220.15	0.143	+			24492	LGHLGLVTPT	10	49	336.5342593352082	NaN	0	336.53424072265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LGHLGLVTPT_	CYP4F8|p.Y242Ffs*8|1|0.01|ENSG00000186526|chr19:15623153-15623154|-/GTGAAACGGAATAACCAGTTCTTCCGTTTCCCTTGTT|frameshift_variant;ENSG00000186526|ENST00000612078|CYP4F8;ENST00000592279.6_1_19:15751729-15757926:+|nuORF;nc|ENSG00000186529|Q08477-2|CYP4F3	16.473147378115264	0.4201028297492154	4				NaN	NaN	0	NaN	13210	5752	18963
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	18984	50.803	NaN	7279.3	30	0	864.32	0.14				-1	 	0	64	406.2483750685559	810.4821972039118	2	406.24847412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13212	5770	18983
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19010	50.932	NaN	1701.1	30	0	295.75	0.14	+			43457	TGNIIVLV	8	37	414.7617587800044	NaN	0	414.7613525390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TGNIIVLV_	ENSG00000170820|ENST00000406846|FSHR;FSHR|p.T555Wfs*89|1|0.07|ENSG00000170820|chr2:48963159-48963160|-/TCCAA|frameshift_variant;nc|ENSG00000170820|P23945-2|FSHR;nc|ENSG00000170820|P23945-3|FSHR;nc|ENSG00000170820|P23945-4|FSHR	19.359975847455235	1.7418937515398478	4				NaN	NaN	0	NaN	13214	5794	19009
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19032	51.03	NaN	1383.2	30	0	74.725	0.142			+	33884	RRPDPVSL	8	52	470.27234509113094	938.5301372490619	2	470.27197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RRPDPVSL_	REV__ENST00000291560.6_1_21:45077957-45078116:-|nuORF	24.20275056022122	0.7724576178584145	4				NaN	NaN	0	NaN	13218	5812	19031
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19039	51.062	NaN	1745.8	30	0	220.39	0.143	+			22117	KSNSFLKAL	9	48	336.5342593352082	NaN	0	336.5343933105469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSNSFLKAL_	STK38|p.F382Lfs*70|1|0.16|ENSG00000112079|chr6:36497806-36497806|A/-|frameshift_variant	17.364965105453717	0.37820932774828947	4				NaN	NaN	0	NaN	13219	5818	19038
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19082	51.271	NaN	1552.5	30	0	223.65	0.145			+	10561	EYDNKLTYS	9	47	566.7593383789062	NaN	0	566.7593383789062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EYDNKLTYS_	REV__ENSG00000237765|ENST00000422728|FAM200B	19.996771675451527	0.3693019437812985	4				NaN	NaN	0	NaN	13223	5857	19081
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19107	51.399	NaN	1834.4	30	0	287.4	0.143				-1	ASTKKVVMK	9	54	336.5342593352082	NaN	0	336.53436279296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ASTKKVVM(Oxidation (M))K_	CFAP47|p.F1567Vfs*4|1|0.31|ENSG00000165164|chrX:36098829-36098830|-/G|frameshift_variant;CFAP47|p.H2345Afs*15|1|0.09|ENSG00000165164|chrX:36236809-36236810|-/A|frameshift_variant;CFAP47|p.K734Nfs*6|1|0.13|ENSG00000165164|chrX:35971909-35971909|A/-|frameshift_variant;CFAP47|p.P2326Tfs*34|1|0.26|ENSG00000165164|chrX:36236751-36236752|-/A|frameshift_variant;ENSG00000165164|ENST00000378653|CFAP47;nc|ENSG00000165164|Q6ZTR5-1|CFAP47;nc|ENSG00000165164|Q6ZTR5-2|CFAP47;nc|ENSG00000165164|Q6ZTR5-6|CFAP47	17.468008924990375	0.37786057458515737	4				NaN	NaN	0	NaN	13224	5881	19106
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19171	51.708	NaN	876.05	30	0	65.05	0.142			+	10000	ERLVKKSN	8	43	487.2933559852628	972.5721590373256	2	487.2932434082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ERLVKKSN_	REV__APC2|p.P1892Rfs*104|1|0.27|ENSG00000115266|chr19:1468971-1468971|C/-|frameshift_variant;REV__ENSG00000115266|ENST00000590469|APC2;REV__nc|ENSG00000115266|O95996-2|APC2;REV__nc|ENSG00000115266|O95996-3|APC2	17.364965105453717	0.7956685240855921	4				NaN	NaN	0	NaN	13231	5938	19170
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19179	51.74	NaN	1957	30	0	257.08	0.143			+	11388	FLLVQNKF	8	46	336.8685563413795	NaN	0	336.8688659667969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FLLVQNKF_	REV__ENSG00000180488|ENST00000370791|MIGA1;REV__nc|ENSG00000180488|Q8NAN2|MIGA1	21.70233525837049	1.7418937515398478	4				NaN	NaN	0	NaN	13233	5944	19178
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19201	51.84	NaN	6117	30	0	1585.3	0.214				-1	 	0	52	326.17583167966563	650.3371104261313	2	326.17608642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13237	5962	19200
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19202	51.844	NaN	1396.3	30	0	225.43	0.034				-1	SQGFYCGV	8	37	480.19924454150726	NaN	0	480.1991271972656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))SQGFYC(Carbamidomethyl (C))GV_	DNAJC14|p.F320L|1|0.06|ENSG00000135392|chr12:55827701-55827701|A/G|missense_variant;ENSG00000135392|ENST00000678005|DNAJC14	21.9598887501803	1.7418937515398478	4				NaN	NaN	0	NaN	13238	5962	19200
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19206	51.858	NaN	1648.9	30	0	168.96	0.139			+	-1	GKSSSDSCIS	10	51	343.1512731753632	NaN	0	343.1518859863281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GKSSSDSC(Carbamidomethyl (C))IS_	REV__ENSG00000166716|ENST00000560079|ZNF592	22.579656572578934	0.4201028297492154	4				NaN	NaN	0	NaN	13239	5965	19205
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19215	51.892	NaN	7395.3	30	0	790.31	0.214				-1	 	0	76	327.170661257373	652.326769581546	2	327.1705322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13242	5971	19214
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19216	51.896	NaN	4323	30	0	583.15	0.031	+			13115	GGGGPGMGP	9	48	343.6498745006857	685.2851960681714	2	343.6507873535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GGGGPGMGP_	ENSG00000178445|ENST00000321612|GLDC;GLDC|p.G771R|1|0.39|ENSG00000178445|chr9:6554673-6554673|C/T|missense_variant	14.664097394203935	0.6112419832031292	4				NaN	NaN	0	NaN	13243	5971	19214
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19220	51.91	NaN	2105	30	0	735.34	0.143	+			24830	LISYGEFGN	9	34	500.2434997558594	NaN	0	500.2434997558594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LISYGEFGN_	ENSG00000189050|ENST00000305783|RNFT1;ENST00000486103.6_1_17:58031378-58035783:-|nuORF	15.641811463095205	0.38404136392510424	4				NaN	NaN	0	NaN	13244	5974	19219
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19224	51.926	NaN	1385	30	0	561.59	0.142				-1	 	0	29	483.2679922154622	482.2607157488622	1	483.2680358886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13245	5977	19223
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19241	52.007	NaN	4311.6	30	0	528.09	0.145	+			15652	GVLQLGNIVFK	11	61	594.361328125	NaN	0	594.361328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVLQLGNIVFK_	ENSG00000100345|ENST00000216181|MYH9;MYH9|p.I784*|1|0.07|ENSG00000100345|chr22:36304036-36304036|G/-|frameshift_variant;nc|ENSG00000100345|P35579-2|MYH9	23.52269567125451	0.456735970842152	4				NaN	NaN	0	NaN	13247	5992	19240
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19251	52.056	NaN	2053.9	30	0	246.38	0.214				-1	LCPLALPSL	9	56	492.2850820468974	NaN	0	492.2846374511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_LC(Carbamidomethyl (C))PLALPSL_	ENST00000374881.2_1_6:32812197-32812341:-|nuORF	31.954861631926434	0.3162336699109506	4				NaN	NaN	0	NaN	13248	6001	19250
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19252	52.059	NaN	1568.1	30	0	359.93	0.033				-1	 	0	45	436.77463692842247	2178.8368023091125	5	436.77471923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13249	6001	19250
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19290	52.252	NaN	1828.7	30	0	213.7	0.143	+			21541	KNSSLLAKF	9	58	336.5342593352082	NaN	0	336.5342102050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KNSSLLAKF_	tr|U7SW10|U7SW10_FUSNU23SrRNApseudouridine955/2504/2580synthaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01414PE=3SV=1	21.9598887501803	0.3626577482100488	4				NaN	NaN	0	NaN	13251	6037	19289
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19355	52.561	NaN	1391.1	30	0	171.49	0.144				-1	MTMKTKQR	8	53	549.2759515141212	1096.5373500950423	2	549.2758178710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term),2 Oxidation (M)	_(Acetyl (Protein N-term))M(Oxidation (M))TM(Oxidation (M))KTKQR_	ENSG00000125386|ENST00000637812|FAM193A;FAM193A|p.L673Sfs*142|2|0.36|ENSG00000125386|chr4:2693667-2693667|C/-|frameshift_variant;FAM193A|p.M833Wfs*23|2|0.34|ENSG00000125386|chr4:2696450-2696450|A/-|frameshift_variant;FAM193A|p.P726Rfs*89|1|0.41|ENSG00000125386|chr4:2693828-2693828|C/-|frameshift_variant;nc|ENSG00000125386|P78312-2|FAM193A;nc|ENSG00000125386|P78312-3|FAM193A;nc|ENSG00000125386|P78312-4|FAM193A;nc|ENSG00000125386|P78312-5|FAM193A;nc|ENSG00000125386|P78312-6|FAM193A;nc|ENSG00000125386|P78312|FAM193A	37.15910966729921	0.6739408393984688	4				NaN	NaN	0	NaN	13259	6094	19354
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19362	52.593	NaN	1854.5	30	0	214.78	0.214			+	43424	TGKLGQLKY	9	53	336.5342593352082	NaN	0	336.5341796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TGKLGQLKY_	REV__ENSG00000174776|ENST00000682715|WDR49;REV__WDR49|p.K607Nfs*9|2|0.38|ENSG00000174776|chr3:167505314-167505314|T/-|frameshift_variant	18.324413293986947	0.3749620627292244	4				NaN	NaN	0	NaN	13260	6100	19361
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19363	52.597	NaN	840.35	30	0	72.747	0.032				-1	 	0	35	405.24549328552325	404.23821681892326	1	406.2487487792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13261	6100	19361
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19370	52.627	NaN	2147.8	30	0	189.39	0.142			+	16598	HGGTRVISL	9	58	470.2723847233671	938.5302165135342	2	470.271728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HGGTRVISL_	REV__ENSG00000137200|ENST00000373451|CMTR1	29.14955571784316	0.5308295550522326	4				NaN	NaN	0	NaN	13262	6106	19369
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19395	52.742	NaN	2219.6	30	0	309.58	0.143			+	43479	TGPALHTIVV	10	59	336.5342593352082	NaN	0	336.5341796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TGPALHTIVV_	REV__ENSG00000153048|ENST00000311052|CARHSP1	17.364965105453717	0.4201028297492154	4				NaN	NaN	0	NaN	13266	6127	19394
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19424	52.887	NaN	6700.3	30	0	764.51	0.141	+			47586	VRPRTLSA	8	66	450.27475235391626	898.5349517746325	2	450.27459716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VRPRTLSA_	ENST00000478153.1_1_2:217363604-217363871:+|nuORF	20.94693142431847	0.7975965917238792	4				NaN	NaN	0	NaN	13268	6154	19423
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19428	52.903	NaN	1970.7	30	0	403.4	0.142	+			25079	LLLRLSVC	8	52	458.78779220046187	NaN	0	458.7879943847656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LLLRLSVC_	ENST00000256682.8_1_12:49331189-49331324:-|nuORF	33.51558372728122	1.7418937515398478	4				NaN	NaN	0	NaN	13269	6157	19427
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19435	52.935	NaN	2370.2	30	0	325.58	0.214			+	15338	GTVKTNLKF	9	48	336.5342593352082	NaN	0	336.5343933105469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTVKTNLKF_	REV__ENSG00000091140|ENST00000205402|DLD;REV__nc|ENSG00000091140|P09622-2|DLD;REV__nc|ENSG00000091140|P09622-3|DLD	17.364965105453717	0.37820932774828947	4				NaN	NaN	0	NaN	13270	6163	19434
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19436	52.939	NaN	1172.3	30	0	117.38	0.032			+	30014	PPLLTLAS	8	36	406.2483244426627	NaN	0	406.2484436035156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PPLLTLAS_	REV__ENSG00000152784|ENST00000415738|PRDM8	13.775330524044264	1.7418937515398478	4				NaN	NaN	0	NaN	13271	6163	19434
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19479	53.146	NaN	5563	30	0	540.59	0.145	+			11698	FRQRILAPCKL	11	78	672.9007736926062	1343.7869944520123	2	672.8994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FRQRILAPCKL_	ENSG00000145781|ENST00000274458|COMMD10	24.519189625965996	0.7326048944360514	4				NaN	NaN	0	NaN	13275	6202	19478
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19495	53.225	NaN	3058.5	30	0	846.92	0.149				-1	YKYCDEDSDSD	11	40	466.16543913706334	NaN	0	466.1650390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_YKYC(Carbamidomethyl (C))DEDSDSD_	ENSG00000181191|ENST00000374571|PJA1;nc|ENSG00000181191|Q8NG27-2|PJA1;nc|ENSG00000181191|Q8NG27|PJA1	17.833141474888023	0.456735970842152	4				NaN	NaN	0	NaN	13276	6217	19494
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19511	53.305	NaN	2161.2	30	0	238.81	0.144			+	24752	LHSVPGSLVV	10	58	336.5342593352082	NaN	0	336.5345458984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LHSVPGSLVV_	REV__ENSG00000102145|ENST00000376670|GATA1;REV__nc|ENSG00000102145|P15976-3|GATA1	23.04248740728303	0.42010282974921537	4				NaN	NaN	0	NaN	13277	6232	19510
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19537	53.432	NaN	2146.5	30	0	332.26	0.144	+			32706	RAKIFRRD	8	55	531.3199701280897	1060.6253873229793	2	531.3197021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RAKIFRRD_	ENSG00000121316|ENST00000240617|PLBD1	18.324413293986947	0.7971860551947066	4				NaN	NaN	0	NaN	13279	6256	19536
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19567	53.577	NaN	2040	30	0	150.35	0.143	+			30537	QAKHTAKSI	9	59	492.28561107145566	982.5566692097113	2	492.2851257324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QAKHTAKSI_	ENSG00000136699|ENST00000680298|SMPD4;ENST00000482171.5_1_2:130910130-130912221:-|nuORF;nc|ENSG00000136699|Q9NXE4-10|SMPD4;nc|ENSG00000136699|Q9NXE4-2|SMPD4;nc|ENSG00000136699|Q9NXE4-3|SMPD4;nc|ENSG00000136699|Q9NXE4-4|SMPD4;nc|ENSG00000136699|Q9NXE4-5|SMPD4;nc|ENSG00000136699|Q9NXE4-6|SMPD4;nc|ENSG00000136699|Q9NXE4-7|SMPD4;nc|ENSG00000136699|Q9NXE4-8|SMPD4;nc|ENSG00000136699|Q9NXE4-9|SMPD4;nc|ENSG00000136699|Q9NXE4|SMPD4	17.468008924990375	0.6112419832031292	4				NaN	NaN	0	NaN	13282	6283	19566
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19580	53.64	NaN	2264.8	30	0	287.85	0.143			+	1596	AGLIAASRHL	10	59	336.8686515514328	NaN	0	336.8689270019531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AGLIAASRHL_	REV__ENST00000563893.5_1_16:29872371-29874522:-|nuORF;REV__nc|ENSG00000103502|O14735-2|CDIPT	23.52269567125451	0.42010282974921537	4				NaN	NaN	0	NaN	13283	6295	19579
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19609	53.785	NaN	2886.4	30	0	241.37	0.142			+	3175	ASIRVREL	8	67	472.2880818593046	942.5616107854092	2	472.2872314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASIRVREL_	REV__ENSG00000070366|ENST00000263073|SMG6	21.9598887501803	0.7897753010812679	4				NaN	NaN	0	NaN	13285	6322	19608
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19619	53.833	NaN	1819.6	30	0	279.15	0.145			+	33912	RRSPQIIPPSA	11	51	611.3562324154891	NaN	0	611.3572998046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RRSPQIIPPSA_	REV__ENSG00000242732|ENST00000609883|RTL5	23.52269567125451	0.456735970842152	4				NaN	NaN	0	NaN	13286	6331	19618
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19650	53.978	NaN	1831.1	30	0	302.43	0.143	+			22118	KSNSFLKAL	9	42	336.5342593352082	NaN	0	336.5340576171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSNSFLKAL_	STK38|p.F382Lfs*70|1|0.16|ENSG00000112079|chr6:36497806-36497806|A/-|frameshift_variant	23.04248740728303	0.3589936788096251	4				NaN	NaN	0	NaN	13290	6358	19649
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19697	54.214	NaN	1302.3	30	0	194.3	0.144	+			16748	HLQRVSLPR	9	50	553.3328037075134	1104.6510544818268	2	553.3316650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HLQRVSLPR_	ENSG00000175164|ENST00000538324|ABO;nc|ENSG00000175164|P16442|ABO	12.206847966760668	0.6112419832031292	4				NaN	NaN	0	NaN	13292	6403	19696
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19707	54.262	NaN	994.07	30	0	238.94	0.138			+	23613	LAPKGLARAA	10	41	323.2061430321718	NaN	0	323.20587158203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LAPKGLARAA_	REV__ENST00000259883.3_1_6:28249363-28249588:+|nuORF	12.206681093483082	0.4201028297492154	4				NaN	NaN	0	NaN	13293	6412	19706
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19720	54.326	NaN	1945.8	30	0	271.36	0.143				-1	ASMKKVKSL	9	36	336.5342593352082	NaN	0	336.53436279296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ASM(Oxidation (M))KKVKSL_	ENST00000369426.9_1_1:119575536-119588262:-|nuORF	20.94693142431847	0.3660861156085067	4				NaN	NaN	0	NaN	13294	6424	19719
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19728	54.358	NaN	2903.7	30	0	341.61	0.148			+	17833	IFHWRKHRCRH	11	68	788.4193115234375	NaN	0	788.4193115234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IFHWRKHRCRH_	REV__ENSG00000181826|ENST00000454158|RELL1	9.705651100619752	0.456735970842152	4				NaN	NaN	0	NaN	13296	6430	19727
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19750	54.469	NaN	2076.6	30	0	279.47	0.143	+			25552	LPVSALRNSA	10	50	514.298712532467	1026.582872131734	2	514.7999267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LPVSALRNSA_	ENSG00000144028|ENST00000323853|SNRNP200	17.468008924990375	0.7276870902328821	4				NaN	NaN	0	NaN	13297	6451	19749
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19763	54.534	NaN	2205.7	30	0	182.57	0.144				-1	TPLCCRRD	8	55	531.7455644511838	NaN	0	531.7449951171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))TPLC(Carbamidomethyl (C))CRRD_	ENSG00000139269|ENST00000266646|INHBE;ENST00000551553.1_1_12:57846273-57850628:+|nuORF;INHBE|p.V254I|1|0.36|ENSG00000139269|chr12:57456555-57456555|G/A|missense_variant	23.04248740728303	1.7418937515398478	4				NaN	NaN	0	NaN	13298	6463	19762
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19788	54.661	NaN	2025.4	30	0	253.49	0.143			+	3443	ASQLVRHVV	9	56	336.86867260745	NaN	0	336.8683166503906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASQLVRHVV_	REV__nc|ENSG00000111481|P61923-5|COPZ1	20.94693142431847	0.3660861156085067	4				NaN	NaN	0	NaN	13299	6487	19787
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19792	54.677	NaN	1758.6	30	0	202.7	0.214				-1	 	0	56	494.3011270142505	986.587701095301	2	494.301025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13300	6490	19791
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19793	54.68	NaN	1043.4	30	0	99.176	0.034	+			25634	LQRAKPSN	8	53	457.2642493629231	912.5139457926463	2	457.26361083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LQRAKPSN_	ENSG00000116273|ENST00000377648|PHF13	21.9598887501803	0.7897753010812679	4				NaN	NaN	0	NaN	13301	6490	19791
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19815	54.788	NaN	3957.6	30	0	294.9	0.148				-1	RKQRRMCRRDP	11	77	787.9161851713662	NaN	0	787.916748046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_RKQRRM(Oxidation (M))C(Carbamidomethyl (C))RRDP_	ENSG00000143816|ENST00000272164|WNT9A;WNT9A|p.G167Afs*38|2|0.38|ENSG00000143816|chr1:227924253-227924253|C/-|frameshift_variant	9.182911543092327	0.456735970842152	4				NaN	NaN	0	NaN	13302	6511	19814
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19860	55.009	NaN	1925.8	30	0	289.77	0.145			+	9421	EKIRMKVVF	9	57	575.3457308559601	1148.6769087787202	2	575.3455200195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EKIRMKVVF_	REV__ENSG00000120057|ENST00000266066|SFRP5	20.94693142431847	0.6074874384046576	4				NaN	NaN	0	NaN	13305	6553	19859
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19864	55.025	NaN	66679	30	0	26813	0.137				-1	 	0	68	281.05173196873096	NaN	0	281.05145263671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13306	6556	19863
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19868	55.041	NaN	1441.3	30	0	155.45	0.143				-1	SVMSIKKKA	9	55	336.5342593352082	NaN	0	336.5343017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_SVM(Oxidation (M))SIKKKA_	ENSG00000079156|ENST00000190611|OSBPL6;nc|ENSG00000079156|Q9BZF3-2|OSBPL6;nc|ENSG00000079156|Q9BZF3-3|OSBPL6;nc|ENSG00000079156|Q9BZF3-4|OSBPL6;nc|ENSG00000079156|Q9BZF3-5|OSBPL6;nc|ENSG00000079156|Q9BZF3-6|OSBPL6;OSBPL6|p.F898Lfs*31|1|0.36|ENSG00000079156|chr2:178394428-178394428|T/-|frameshift_variant;OSBPL6|p.P358Lfs*23|1|0.08|ENSG00000079156|chr2:178349305-178349305|C/-|frameshift_variant;OSBPL6|p.Y622Qfs*94|1|0.12|ENSG00000079156|chr2:178383264-178383265|-/TCAAG|frameshift_variant	24.519189625965996	0.35377483217337163	4				NaN	NaN	0	NaN	13307	6559	19867
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19872	55.058	NaN	2864.5	30	0	492.19	0.145				-1	 	0	49	617.1104040288049	NaN	0	617.1101684570312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13308	6562	19871
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19955	55.468	NaN	2106.4	30	0	300.14	0.143	+			11716	FSARKSRR	8	54	336.5342593352082	NaN	0	336.5338439941406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FSARKSRR_	ENST00000265165.5_1_4:109088997-109089327:-|nuORF	25.450171626174864	1.7418937515398478	4				NaN	NaN	0	NaN	13313	6640	19954
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19965	55.516	NaN	2387.9	30	0	394.61	0.143			+	18939	IVNKKTKSN	9	52	516.314426183331	1030.6142994334618	2	516.3140258789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IVNKKTKSN_	REV__ENSG00000137040|ENST00000259569|RANBP6;REV__RANBP6|p.T977I|1|0.39|ENSG00000137040|chr9:6012678-6012678|G/A|missense_variant	28.081489160057373	0.5408112046645406	4				NaN	NaN	0	NaN	13314	6649	19964
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19982	55.595	NaN	1232.5	30	0	157.16	0.214	+			19416	KAPRNLGTT	9	52	479.2774208362293	956.5402887392586	2	479.27752685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAPRNLGTT_	PRRT2|p.G259Vfs*54|1|0.25|ENSG00000167371|chr16:29813825-29813825|G/-|frameshift_variant	21.9598887501803	0.5980208138527809	4				NaN	NaN	0	NaN	13316	6664	19981
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	19983	55.599	NaN	2058.1	30	0	178.89	0.03				-1	 	0	63	325.6880396878072	649.3615264424144	2	325.6882019042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13317	6664	19981
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	20011	55.739	NaN	2014.4	30	0	224.34	0.155				-1	HPTTCSGEPMD	11	42	624.2362193219913	NaN	0	624.2366943359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_HPTTC(Carbamidomethyl (C))SGEPM(Oxidation (M))D_	ENSG00000164853|ENST00000316333|UNCX	14.864876125193954	0.456735970842152	4				NaN	NaN	0	NaN	13318	6691	20010
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	20024	55.802	NaN	2063.7	30	0	272.91	0.143			+	2002	AKHILELSP	9	51	336.5342593352082	NaN	0	336.5347595214844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AKHILELSP_	REV__ADGRF5|p.Q619Tfs*21|1|0.29|ENSG00000069122|chr6:46865177-46865178|-/T|frameshift_variant;REV__ADGRF5|p.Q821Afs*22|1|0.06|ENSG00000069122|chr6:46859442-46859443|-/GGGC|frameshift_variant;REV__ENSG00000069122|ENST00000283296|ADGRF5;REV__nc|ENSG00000069122|Q8IZF2-2|ADGRF5;REV__nc|ENSG00000069122|Q8IZF2-3|ADGRF5	17.364965105453717	0.37820932774828947	4				NaN	NaN	0	NaN	13319	6703	20023
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	20076	56.161	NaN	1731.4	30	0	242.95	0.143	+			9521	EKYLRSVL	8	46	336.5342593352082	NaN	0	336.53436279296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EKYLRSVL_	ENSG00000197892|ENST00000524189|KIF13B	18.324413293986947	1.7418937515398478	4				NaN	NaN	0	NaN	13320	6754	20075
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	20098	56.271	NaN	2698	30	0	246.44	0.144	+			25039	LLHRGLPGGR	10	62	538.3272977930857	1074.6400426529713	2	538.32763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LLHRGLPGGR_	ENSG00000165816|ENST00000392982|VWA2;nc|ENSG00000165816|Q5GFL6-2|VWA2	26.69291269510374	0.6618461711292317	4				NaN	NaN	0	NaN	13321	6775	20097
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	20142	56.492	NaN	939.75	30	0	227.82	0.214	+			41277	SVLLAAPALA	10	25	463.2873715272012	NaN	0	463.2873229980469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVLLAAPALA_	ENST00000328914.4_1_7:4803200-4803701:+|nuORF	12.959181472943097	0.4201028297492154	4				NaN	NaN	0	NaN	13323	6817	20141
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	20143	56.495	NaN	1553	30	0	316.19	0.046				-1	 	0	37	572.1266633941054	NaN	0	572.1259155273438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	4				NaN	NaN	0	NaN	13324	6817	20141
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	20150	56.525	NaN	1802.7	30	0	259.09	0.143	+			50925	YGQKLSKLA	9	50	336.5342593352082	NaN	0	336.5342102050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YGQKLSKLA_	ENSG00000168874|ENST00000306279|ATOH8;ENST00000463422.5_1_2:85981774-86000028:+|nuORF;ENST00000469442.5_1_2:85978949-86014010:+|nuORF;nc|ENSG00000168874|Q96SQ7-2|ATOH8	18.324413293986947	0.3749620627292244	4				NaN	NaN	0	NaN	13325	6823	20149
200727_Lumos_FAIMS_CID_IT_CVSet2_5ul_172T	20217	56.87	NaN	2036.7	30	0	230.96	0.143	+			37221	SKLTLFGNK	9	52	336.5342593352082	NaN	0	336.5341796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SKLTLFGNK_	ENSG00000144749|ENST00000273261|LRIG1;ENST00000496559.6_1_3:66430689-66456253:-|nuORF;LRIG1|p.H868Qfs*44|1|0.18|ENSG00000144749|chr3:66382276-66382286|TGCTCTCAATG/-|frameshift_variant	17.364965105453717	0.37820932774828947	4				NaN	NaN	0	NaN	13326	6889	20216
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2132	11.285	NaN	2720.1	30	0	648.66	0.142	+			21041	KKKQITPS	8	48	465.29278552036715	928.5710181075343	2	465.292724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KKKQITPS_	ENSG00000138778|ENST00000265148|CENPE;nc|ENSG00000138778|Q02224-3|CENPE	51.33545320467046	0.5859736979383976	5				NaN	NaN	0	NaN	0	2130	2131
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2209	11.624	NaN	22159	30	0	6301.8	0.143			+	31399	QKKKQSKK	8	64	501.8247576042921	1001.6349622753842	2	501.8249816894531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QKKKQSKK_	REV__ENSG00000176208|ENST00000321990|ATAD5	143.8867514904718	0.2724165679903577	5				NaN	NaN	0	NaN	14	2193	2208
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2298	11.974	NaN	755.06	30	0	260.28	0.143			+	31400	QKKKQSKK	8	20	501.8247576042921	1001.6349622753842	2	501.82501220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QKKKQSKK_	REV__ENSG00000176208|ENST00000321990|ATAD5	45.9519527083369	0.6193794311207887	5				NaN	NaN	0	NaN	43	2253	2297
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2350	12.187	NaN	7818.9	30	0	1814.3	0.146	+			5391	ATYETKESKK	10	43	395.54356757794403	1183.608873334032	3	395.5436706542969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATYETKESKK_	ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65623404-65625570:-|nuORF;nc|ENSG00000165410|Q9Y281-3|CFL2	63.42647028704847	0.33467688528802414	5				NaN	NaN	0	NaN	56	2292	2349
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2368	12.254	NaN	1499.6	30	0	369.49	0.143	+			32016	QRLRGRYT	8	31	525.3017717062324	1048.5889904792648	2	525.302490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QRLRGRYT_	ENST00000426431.2_1_12:53809661-53809787:+|nuORF	20.94693142431847	0.7975965917238792	5				NaN	NaN	0	NaN	62	2304	2367
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2418	12.466	NaN	5700.4	30	0	1113.6	0.144	+			38823	SSNDKVIKK	9	46	340.20117444128846	1017.5816939240653	3	340.20135498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSNDKVIKK_	ALDH3A1|p.P445Rfs*6|4|0.31|ENSG00000108602|chr17:19738336-19738336|G/-|frameshift_variant;ENSG00000108602|ENST00000225740|ALDH3A1;ENST00000479677.6_1_17:19641536-19646703:-|nuORF	19.1035232394073	0.6112419832031293	5				NaN	NaN	0	NaN	73	2343	2417
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2426	12.499	NaN	1042.4	30	0	264.18	0.142	+			22691	KVAGAATPKK	10	33	485.8059215999188	969.5972902666376	2	485.805908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVAGAATPKK_	ENSG00000124575|ENST00000244534|H1-3	51.52775601994872	0.4429225830406686	5				NaN	NaN	0	NaN	75	2349	2425
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2451	12.599	NaN	2568.7	30	0	525.47	0.145	+			40782	SVDPRRRNK	9	32	376.55125598974735	1126.6319385694421	3	376.55096435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVDPRRRNK_	ENSG00000167526|ENST00000311528|RPL13;ENST00000399461.8_1_16:89627605-89629447:+|nuORF;ENST00000484610.5_1_16:89627907-89629447:+|nuORF;ENST00000563749.1_1_16:89627907-89628201:+|nuORF;ENST00000565571.5_1_16:89627367-89628201:+|nuORF	24.519189625965996	0.574102787014149	5				NaN	NaN	0	NaN	82	2367	2450
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2467	12.65	NaN	800.42	30	0	109.14	0.143			+	31354	QKAFLGAAGGA	11	39	495.77044814712303	NaN	0	495.7709045410156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QKAFLGAAGGA_	REV__BIN2|p.T500Hfs*24|1|0.33|ENSG00000110934|chr12:51291608-51291609|-/G|frameshift_variant;REV__ENSG00000110934|ENST00000615107|BIN2;REV__ENST00000605039.5_1_12:51696457-51717886:-|nuORF;REV__nc|ENSG00000110934|Q9UBW5-2|BIN2	34.172542307311794	0.4131234684587831	5				NaN	NaN	0	NaN	89	2376	2466
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2486	12.731	NaN	8328.2	30	0	1841.4	0.147			+	30069	PQLAAAEQYIQ	11	49	411.2151294205454	1230.6235588618363	3	411.21539306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PQLAAAEQYIQ_	REV__ENSG00000133687|ENST00000539277|TMTC1;REV__nc|ENSG00000133687|Q8IUR5-1|TMTC1;REV__nc|ENSG00000133687|Q8IUR5-2|TMTC1;REV__nc|ENSG00000133687|Q8IUR5-4|TMTC1;REV__TMTC1|p.E735Kfs*5|1|0.3|ENSG00000133687|chr12:29516454-29516454|T/-|frameshift_variant	50.033510581677724	0.4206539900604183	5				NaN	NaN	0	NaN	93	2391	2485
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2516	12.828	NaN	2498.5	30	0	381.22	0.143			+	38447	SSAPIIFATA	10	27	326.5136413574219	NaN	0	326.5136413574219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSAPIIFATA_	REV__ENSG00000185513|ENST00000418998|L3MBTL1;REV__L3MBTL1|p.P161Qfs*39|1|0.5|ENSG00000185513|chr20:43515049-43515049|C/-|frameshift_variant;REV__nc|ENSG00000185513|Q9Y468|L3MBTL1	36.446750945000026	0.3805027428805705	5				NaN	NaN	0	NaN	108	2406	2515
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2521	12.844	NaN	2569.1	30	0	348.78	0.142	+			34342	RTQAAAVQK	9	58	486.78296316414503	NaN	0	486.7827453613281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTQAAAVQK_	ARHGAP28|p.F355Lfs*8|2|0.4|ENSG00000088756|chr18:6873514-6873514|T/-|frameshift_variant;ARHGAP28|p.G328Wfs*4|1|0.21|ENSG00000088756|chr18:6873432-6873433|-/T|frameshift_variant;ARHGAP28|p.R364Gfs*7|1|0.08|ENSG00000088756|chr18:6873541-6873541|A/-|frameshift_variant;ENSG00000088756|ENST00000383472|ARHGAP28;ENSG00000146376|ENST00000368149|ARHGAP18;nc|ENSG00000088756|Q9P2N2-2|ARHGAP28;nc|ENSG00000146376|Q8N392-2|ARHGAP18	106.88024417677582	0.01251452808581555	5				NaN	NaN	0	NaN	110	2409	2520
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2528	12.863	NaN	1912.7	30	0	283.34	0.143	+			46791	VHKEKGANK	9	54	505.7911587891723	NaN	0	505.7912292480469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VHKEKGANK_	ENSG00000005889|ENST00000304543|ZFX;ENSG00000067646|ENST00000155093|ZFY;nc|ENSG00000005889|P17010-2|ZFX;nc|ENSG00000005889|P17010-3|ZFX;nc|ENSG00000067646|P08048-2|ZFY;nc|ENSG00000067646|P08048-3|ZFY;ZFY|p.M685Cfs*17|2|0.62|ENSG00000067646|chrY:2979634-2979634|A/-|frameshift_variant	47.95952297671804	0.22075498469600283	5				NaN	NaN	0	NaN	114	2412	2527
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2539	12.898	NaN	2572.2	30	0	1153	0.142			+	34347	RTQDPLAR	8	34	478.76708056834605	955.5196082034921	2	478.767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTQDPLAR_	REV__sp|F5HET4|U131A_HCMVMProteinUL131AOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL131APE=1SV=1	42.396135135203025	0.6414440140393314	5				NaN	NaN	0	NaN	119	2418	2538
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2548	12.92	NaN	29630	30	0	21654	0.142	+			4853	ATPKKTVPK	9	44	485.30786952359284	968.6011861139857	2	485.30841064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATPKKTVPK_	ENSG00000166197|ENST00000605788|NOLC1;nc|ENSG00000166197|Q14978-3|NOLC1	79.71258880314673	0.09879134589249085	5				NaN	NaN	0	NaN	125	2421	2547
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2567	12.969	NaN	3503.6	30	0	915.48	0.144	+			21168	KKVSHSSKK	9	62	514.8138881771995	1027.6132234211989	2	514.8145751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KKVSHSSKK_	ENSG00000116731|ENST00000311066|PRDM2;nc|ENSG00000116731|Q13029-2|PRDM2;nc|ENSG00000116731|Q13029-3|PRDM2;nc|ENSG00000116731|Q13029-5|PRDM2;PRDM2|p.P1648Qfs*14|1|0.24|ENSG00000116731|chr1:13782731-13782731|G/-|frameshift_variant	64.20726635412375	0.17854274437659667	5				NaN	NaN	0	NaN	138	2427	2566
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2610	13.095	NaN	875.41	30	0	91.399	0.214			+	38237	SQLHGQITR	9	37	520.2858737774246	NaN	0	520.2855834960938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SQLHGQITR_	REV__ENSG00000163714|ENST00000473835|U2SURP;REV__nc|ENSG00000163714|O15042-2|U2SURP;REV__nc|ENSG00000163714|O15042-3|U2SURP;REV__U2SURP|p.K866Nfs*10|1|0.31|ENSG00000163714|chr3:143050987-143050987|A/-|frameshift_variant;REV__U2SURP|p.S934Afs*11|1|0.34|ENSG00000163714|chr3:143054963-143054963|C/-|frameshift_variant	58.22992032128504	0.15686832049467786	5				NaN	NaN	0	NaN	163	2445	2609
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2611	13.099	NaN	1210.1	30	0	316.13	0.035	+			9822	EPGRLWLSG	9	38	507.77023211561726	NaN	0	507.7704772949219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EPGRLWLSG_	PERM1|p.Q529Rfs*39|1|0.27|ENSG00000187642|chr1:979445-979445|G/-|frameshift_variant	37.15910966729921	0.2899585034171616	5				NaN	NaN	0	NaN	164	2445	2609
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2683	13.383	NaN	1333.5	30	0	211.03	0.141	+			43280	TFGKKKGP	8	43	431.76112708320113	861.5077012332023	2	431.76068115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TFGKKKGP_	ENSG00000149806|ENST00000529639|FAU;FAU|p.A131T|1|0.24|ENSG00000149806|chr11:65120692-65120692|C/T|missense_variant	51.33545320467046	0.5859736979383976	5				NaN	NaN	0	NaN	185	2496	2682
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2700	13.437	NaN	1825.4	30	0	215.84	0.215			+	19587	KDDRLDRK	8	57	523.291300406726	1044.568047880252	2	523.29248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KDDRLDRK_	REV__ENST00000578535.1_1_18:22265891-22265996:-|nuORF	62.107414245175825	0.4809183816468817	5				NaN	NaN	0	NaN	193	2505	2699
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2701	13.44	NaN	1835.9	30	0	252.53	0.033			+	29795	PITHLKGP	8	55	431.76112708320113	861.5077012332023	2	432.26251220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PITHLKGP_	REV__ENSG00000141506|ENST00000447110|PIK3R5;REV__ENST00000578515.5_1_17:8785060-8814811:-|nuORF;REV__PIK3R5|p.W600Lfs*7|1|0.15|ENSG00000141506|chr17:8887202-8887203|-/A|frameshift_variant	44.116797842482775	0.6307669463330267	5				NaN	NaN	0	NaN	194	2505	2699
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2706	13.455	NaN	1566.5	30	0	402.5	0.144	+			43726	TKTQPQAACK	10	31	538.2825501581555	NaN	0	538.28271484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TKTQPQAACK_	nc|ENSG00000169282|Q14722-3|KCNAB1	19.996771675451527	0.4201028297492154	5				NaN	NaN	0	NaN	196	2508	2705
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2712	13.473	NaN	7709.2	30	0	4226.6	0.147	+			41469	SVNQGQNIHRK	11	45	427.5654039990928	1279.6743825974784	3	427.89996337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVNQGQNIHRK_	CFTR|p.E1044Dfs*20|1|0.04|ENSG00000001626|chr7:117610661-117610662|-/TCAAAGAAAAC|frameshift_variant;CFTR|p.G1208Afs*3|1|0.3|ENSG00000001626|chr7:117627672-117627672|G/-|frameshift_variant;CFTR|p.L1258Ffs*7|1|0.26|ENSG00000001626|chr7:117642487-117642488|-/T|frameshift_variant;CFTR|p.S1297Lfs*31|1|0.28|ENSG00000001626|chr7:117652852-117652852|T/-|frameshift_variant;ENSG00000001626|ENST00000003084|CFTR;nc|ENSG00000001626|P13569-2|CFTR	34.08650109265054	0.6322515996262609	5				NaN	NaN	0	NaN	199	2511	2711
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2736	13.537	NaN	8594.6	30	0	3004.5	0.214	+			14341	GTAAKSITK	9	62	438.76106815774216	875.5075833822843	2	438.7613830566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTAAKSITK_	ENSG00000133574|ENST00000255945|GIMAP4	138.06239232086	0.011389075116295402	5				NaN	NaN	0	NaN	214	2520	2735
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2737	13.541	NaN	774.2	30	0	95.972	0.035	+			18596	ISQKESLKA	9	37	502.2931823730469	NaN	0	502.2931823730469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ISQKESLKA_	CEP97|p.K618Nfs*15|1|0.41|ENSG00000182504|chr3:101762516-101762516|A/-|frameshift_variant;ENSG00000182504|ENST00000341893|CEP97;ENST00000489172.5_1_3:101443520-101477325:+|nuORF;nc|ENSG00000182504|Q8IW35-2|CEP97	46.45678178249821	0.2311111838007999	5				NaN	NaN	0	NaN	215	2520	2735
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2745	13.561	NaN	2618.4	30	0	1205.2	0.146	+			22231	KSYDQVHSGK	10	42	383.528382914863	1147.563319344789	3	383.8626708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSYDQVHSGK_	ACOX1|p.N501Tfs*6|1|0.47|ENSG00000161533|chr17:75949577-75949577|T/-|frameshift_variant;ENSG00000161533|ENST00000293217|ACOX1;nc|ENSG00000161533|Q15067-3|ACOX1;nc|ENSG00000161533|Q15067|ACOX1	43.650786325866115	0.5155049133366767	5				NaN	NaN	0	NaN	220	2523	2744
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2753	13.581	NaN	2374.8	30	0	783.97	0.141	+			31769	QPGSVKKV	8	40	421.75850963112066	841.5024663290413	2	421.75848388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QPGSVKKV_	CNN3|p.Q94Sfs*9|1|0.25|ENSG00000117519|chr1:94902225-94902226|-/A|frameshift_variant;ENSG00000117519|ENST00000370206|CNN3;nc|ENSG00000117519|Q15417-2|CNN3;nc|ENSG00000117519|Q15417-3|CNN3	51.33545320467046	0.5859736979383976	5				NaN	NaN	0	NaN	225	2526	2752
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2769	13.633	NaN	1264.5	30	0	299.65	0.147				-1	TVPKMLANLVM	11	30	416.8947051295951	NaN	0	416.8948669433594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_TVPKM(Oxidation (M))LANLVM(Oxidation (M))_	ENSG00000221858|ENST00000641592|OR2A12	21.780426970141523	0.456735970842152	5				NaN	NaN	0	NaN	232	2535	2768
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2784	13.684	NaN	6993.4	30	0	844.33	0.143	+			18785	ITQRGNVAK	9	63	493.79062877282206	985.5667046124441	2	493.79119873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ITQRGNVAK_	ENSG00000120742|ENST00000239944|SERP1;ENSG00000151778|ENST00000379179|SERP2	128.60217544463768	0.015992218256422188	5				NaN	NaN	0	NaN	238	2544	2783
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2792	13.704	NaN	3484.3	30	0	1278.7	0.144	+			48368	VTHEGSTVEK	10	55	543.7750086009117	1085.5354642686234	2	543.7755737304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTHEGSTVEK_	nc|ENSG00000211675|P0CG04|IGLC1;nc|ENSG00000211677|P0DOY2|IGLC2;nc|ENSG00000211679|P0DOY3|IGLC3;nc|ENSG00000211685|A0M8Q6|IGLC7;nc|ENSG00000222037|P0CF74|IGLC6;nc|ENSG00000254709|B9A064|IGLL5	90.14881205920913	0.1302219035121668	5				NaN	NaN	0	NaN	243	2547	2791
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2802	13.728	NaN	496.56	30	0	67.977	0.142	+			16582	HGATNDLTF	9	33	488.2323303222656	NaN	0	488.2323303222656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HGATNDLTF_	ENSG00000162267|ENST00000449956|ITIH3;nc|ENSG00000162267|Q06033-2|ITIH3	34.172542307311794	0.30503706118289736	5				NaN	NaN	0	NaN	250	2550	2801
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2811	13.761	NaN	6080.8	30	0	1335.8	0.214	+			34241	RTGKVTVEK	9	70	509.30652613408296	1016.5984993349659	2	509.30657958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTGKVTVEK_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	106.88024417677582	0.032181361622142884	5				NaN	NaN	0	NaN	253	2556	2810
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2812	13.765	NaN	1456	30	0	291.13	0.034			+	33545	RLEGAPGAR	9	46	463.7621921810506	925.5098314289012	2	463.7618713378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RLEGAPGAR_	REV__ENSG00000215906|ENST00000426928|LACTBL1;REV__nc|ENSG00000215906|A8MY62|LACTBL1	58.78195531508484	0.22376836668196862	5				NaN	NaN	0	NaN	254	2556	2810
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2825	13.813	NaN	1676.9	30	0	438.48	0.144				-1	LAQCQLQTK	9	26	545.2897356301563	1088.5649183271125	2	545.2893676757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_LAQC(Carbamidomethyl (C))QLQTK_	ENSG00000109381|ENST00000686138|ELF2;nc|ENSG00000109381|Q15723-1|ELF2;nc|ENSG00000109381|Q15723-2|ELF2;nc|ENSG00000109381|Q15723-3|ELF2;nc|ENSG00000109381|Q15723-4|ELF2	19.996771675451527	0.6112419832031292	5				NaN	NaN	0	NaN	258	2565	2824
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2854	13.897	NaN	1375.7	30	0	257.15	0.143				-1	MNLNKVNK	8	49	488.7652282714844	NaN	0	488.7652282714844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))NLNKVNK_	tr|U7T3J7|U7T3J7_FUSNUEthanolamineutilizationproteinEutJOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00330PE=3SV=1	55.50420428727701	1.7418937515398478	5				NaN	NaN	0	NaN	275	2577	2853
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2862	13.917	NaN	2563.3	30	0	459.36	0.142	+			6409	AVVKPGNTK	9	51	457.2767978061576	912.5390426791153	2	457.27740478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVVKPGNTK_	ENSG00000178974|ENST00000313833|FBXO34;FBXO34|p.I120Lfs*13|3|0.36|ENSG00000178974|chr14:55350743-55350743|A/-|frameshift_variant;FBXO34|p.L485Cfs*13|1|0.39|ENSG00000178974|chr14:55351837-55351837|T/-|frameshift_variant	87.75429964447693	0.0711966946989736	5				NaN	NaN	0	NaN	280	2580	2861
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2887	13.985	NaN	1862.6	30	0	352.34	0.142	+			17208	HVGDPSVKK	9	45	483.77166582337645	965.5287787135529	2	483.7710876464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HVGDPSVKK_	ENSG00000057294|ENST00000340811|PKP2;nc|ENSG00000057294|Q99959|PKP2	59.93077597824379	0.21419174904018318	5				NaN	NaN	0	NaN	296	2589	2886
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2904	14.022	NaN	12530	30	0	1970.7	0.214	+			5405	ATYGKPVHH	9	66	505.26425263772654	1008.5139523422531	2	505.2643127441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATYGKPVHH_	ENSG00000174748|ENST00000307839|RPL15;ENST00000436146.1_1_3:23959450-23960989:+|nuORF;ENST00000490223.1_1_3:23959920-23960989:+|nuORF;nc|ENSG00000174748|P61313-2|RPL15	101.60071028292904	0.0375685401170269	5				NaN	NaN	0	NaN	310	2592	2903
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2905	14.026	NaN	4122.6	30	0	609.61	0.106			+	25004	LLFVVSRVAG	10	47	354.2204895019531	NaN	0	354.2204895019531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LLFVVSRVAG_	REV__ENST00000368845.5_1_10:126100696-126107461:-|nuORF	58.22992032128504	0.24873293749302264	5				NaN	NaN	0	NaN	311	2592	2903
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2906	14.027	NaN	1431.2	30	0	202.06	0.106			+	43263	TFAKKKSTH	9	25	349.8692932128906	NaN	0	349.8692932128906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TFAKKKSTH_	REV__RPL3|p.K124T|1|0.3|ENSG00000100316|chr22:39316836-39316836|T/G|missense_variant	19.1035232394073	0.3723251548669699	5				NaN	NaN	0	NaN	312	2592	2903
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2907	14.029	NaN	319.04	30	0	46.995	0.036	+			33668	RNKHIHKK	8	18	530.8281860351562	NaN	0	530.8281860351562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RNKHIHKK_	ENSG00000104613|ENST00000397977|INTS10;INTS10|p.T379Hfs*7|1|0.23|ENSG00000104613|chr8:19826553-19826554|-/C|frameshift_variant	15.641811463095205	1.7418937515398478	5				NaN	NaN	0	NaN	313	2592	2903
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2916	14.049	NaN	2145	30	0	400.79	0.214	+			34519	RVGEVGQSK	9	61	480.2665407659762	958.5185285987524	2	480.26666259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVGEVGQSK_	ENSG00000041880|ENST00000398755|PARP3;ENST00000470601.5_1_3:51977371-51978822:+|nuORF;nc|ENSG00000041880|Q9Y6F1-2|PARP3	86.88156770896713	0.07365720931774442	5				NaN	NaN	0	NaN	319	2595	2915
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2917	14.053	NaN	2284.3	30	0	305.83	0.106	+			30994	QERYLLVR	8	51	538.8138720446002	1075.6131911560003	2	538.8147583007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QERYLLVR_	ENSG00000140835|ENST00000539698|CHST4	56.72105179125745	0.5342425954139568	5				NaN	NaN	0	NaN	320	2595	2915
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2918	14.055	NaN	1602.7	30	0	409.79	0.034			+	23548	LAKTEKER	8	45	487.78454710806557	973.5545412829312	2	487.7847595214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LAKTEKER_	REV__ENSG00000100345|ENST00000216181|MYH9;REV__ENSG00000133026|ENST00000360416|MYH10;REV__ENSG00000133392|ENST00000300036|MYH11;REV__nc|ENSG00000100345|P35579-2|MYH9;REV__nc|ENSG00000133026|P35580-2|MYH10;REV__nc|ENSG00000133026|P35580-3|MYH10;REV__nc|ENSG00000133026|P35580-5|MYH10;REV__nc|ENSG00000133026|P35580|MYH10;REV__nc|ENSG00000133392|P35749-2|MYH11;REV__nc|ENSG00000133392|P35749-3|MYH11;REV__nc|ENSG00000133392|P35749-4|MYH11;REV__SYNDIG1-MYH9|1|fusion	27.882242232435846	0.7440473649773525	5				NaN	NaN	0	NaN	321	2595	2915
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2925	14.071	NaN	7856.7	30	0	2626.3	0.144	+			35594	SAYRQPVKK	9	58	359.54510668473915	1075.6134906544175	3	359.5450134277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAYRQPVKK_	ENST00000473871.1_1_13:37583848-37586479:-|nuORF;nc|ENSG00000102710|Q8NEM7-2|SUPT20H;nc|ENSG00000102710|Q8NEM7-3|SUPT20H	58.22992032128504	0.22837015374068087	5				NaN	NaN	0	NaN	325	2598	2924
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2932	14.09	NaN	1836.9	30	0	231.88	0.214	+			40252	STSHVSVSK	9	45	466.2459539556869	930.4773549781738	2	466.246337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STSHVSVSK_	ENSG00000215182|ENST00000621226|MUC5AC;ENSG00000215182|ENST00000621226|MUC5AC;MUC5AC|p.R4729Efs*5|1|0.24|ENSG00000215182|chr11:1192325-1192325|C/-|frameshift_variant;MUC5AC|p.R4729Efs*5|1|0.24|ENSG00000215182|chr11:1192325-1192325|C/-|frameshift_variant	68.84614121027924	0.14577793175421136	5				NaN	NaN	0	NaN	329	2601	2931
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2933	14.094	NaN	965.31	30	0	279.79	0.039	+			25951	LSIFWVLVSQA	11	20	421.5773620605469	NaN	0	421.5773620605469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSIFWVLVSQA_	ENSG00000127366|ENST00000247883|TAS2R5	18.531049691330335	0.456735970842152	5				NaN	NaN	0	NaN	330	2601	2931
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2941	14.113	NaN	4599.5	30	0	1566.7	0.141	+			39738	STISSNASK	9	49	447.73002716171925	893.4455013902385	2	447.7301025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STISSNASK_	ENSG00000101166|ENST00000355937|PRELID3B;nc|ENSG00000101166|Q9Y3B1-2|PRELID3B	65.46538089061403	0.16805504838372562	5				NaN	NaN	0	NaN	335	2604	2940
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2948	14.132	NaN	2153.2	30	0	1353	0.146			+	21811	KRDGEKSRGR	10	29	396.88990338030345	NaN	0	396.87548828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KRDGEKSRGR_	REV__nc|ENSG00000198003|A5D8V7-2|ODAD3	20.83715455343099	0.4201028297492154	5				NaN	NaN	0	NaN	339	2607	2947
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2970	14.204	NaN	1209.4	30	0	138.68	0.141	+			10103	ESLLSRGL	8	46	437.7535606050297	NaN	0	437.75421142578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ESLLSRGL_	ENST00000497028.5_1_10:46159273-46167936:-|nuORF	57.81127852772723	1.7418937515398478	5				NaN	NaN	0	NaN	349	2619	2969
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2985	14.254	NaN	1849	30	0	593.08	0.142	+			21940	KSADPLKSK	9	45	487.28744197589276	972.5603310185855	2	487.28729248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSADPLKSK_	CAPN7|p.K253Nfs*21|1|0.35|ENSG00000131375|chr3:15227870-15227870|A/-|frameshift_variant;ENSG00000131375|ENST00000253693|CAPN7;ENST00000457023.1_1_3:15247773-15262489:+|nuORF	59.93077597824379	0.21419174904018318	5				NaN	NaN	0	NaN	355	2628	2984
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3019	14.338	NaN	1420.2	30	0	507.04	0.214			+	19722	KDTIRKIQ	8	39	501.3088942120782	NaN	0	501.30914306640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KDTIRKIQ_	REV__ENSG00000092531|ENST00000249647|SNAP23;REV__nc|ENSG00000092531|O00161-2|SNAP23	64.20726635412375	1.7418937515398478	5				NaN	NaN	0	NaN	380	2637	3018
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3020	14.341	NaN	1419.2	30	0	246.12	0.035	+			23135	KVVVSPTKK	9	40	493.32415746524936	984.6337619972987	2	493.32464599609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVVVSPTKK_	ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232323706-232327997:-|nuORF	95.81516180277367	0.04847050768394289	5				NaN	NaN	0	NaN	381	2637	3018
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3032	14.367	NaN	6254.4	30	0	1072.2	0.214	+			20042	KEKAKETAL	9	63	509.3008596439453	1016.5871663546906	2	509.3013610839844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEKAKETAL_	ENSG00000169230|ENST00000303204|PRELID1;ENST00000503853.1_1_5:176733373-176733568:+|nuORF;ENST00000567272.1_1_6:126965256-126965442:+|nuORF;nc|ENSG00000169230|Q9Y255-2|PRELID1	56.43379154798735	0.2433427591689151	5				NaN	NaN	0	NaN	390	2640	3031
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3033	14.371	NaN	4406.9	30	0	2102.5	0.106	+			23136	KVVVSPTKK	9	46	329.21829070366266	984.633042711188	3	329.5525207519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVVVSPTKK_	ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232323706-232327997:-|nuORF	44.377184641726394	0.36891676396732553	5				NaN	NaN	0	NaN	391	2640	3031
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3034	14.373	NaN	1836.7	30	0	1702.2	0.038			+	-1	AGPSVCLVERL	11	14	400.8866882324219	NaN	0	400.8866882324219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_AGPSVC(Carbamidomethyl (C))LVERL_	REV__ENST00000535372.1_1_6:160182524-160183172:-|nuORF	17.833141474888023	0.456735970842152	5				NaN	NaN	0	NaN	392	2640	3031
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3051	14.408	NaN	1333.2	30	0	599.13	0.214	+			12902	GESGAGKTV	9	35	403.20675781770797	804.398962702216	2	403.2066345214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GESGAGKTV_	ENSG00000006788|ENST00000252172|MYH13;ENSG00000078814|ENST00000262873|MYH7B;ENSG00000092054|ENST00000355349|MYH7;ENSG00000109061|ENST00000226207|MYH1;ENSG00000109063|ENST00000583535|MYH3;ENSG00000125414|ENST00000245503|MYH2;ENSG00000128833|ENST00000261839|MYO5C;ENSG00000133020|ENST00000403437|MYH8;ENSG00000142347|ENST00000644032|MYO1F;ENSG00000144821|ENST00000693548|MYH15;ENSG00000157483|ENST00000288235|MYO1E;ENSG00000167306|ENST00000285039|MYO5B;ENSG00000197535|ENST00000399233|MYO5A;ENSG00000197616|ENST00000405093|MYH6;ENSG00000264424|ENST00000255381|MYH4;ENST00000541028.5_1_15:52553308-52587917:-|nuORF;ENST00000557461.1_1_14:23869380-23876432:-|nuORF;ENST00000558902.5_1_15:52548900-52571163:-|nuORF;ENST00000561810.1_1_15:52708302-52718136:-|nuORF;ENST00000594774.5_1_19:8618146-8642307:-|nuORF;ENST00000594977.5_1_19:8612968-8642307:-|nuORF;ENST00000595325.5_1_19:8616850-8642307:-|nuORF;ENST00000598529.5_1_19:8616563-8619410:-|nuORF;MYH1|p.L229Pfs*14|1|0.19|ENSG00000109061|chr17:10513876-10513877|-/G|frameshift_variant;MYH1|p.N889Mfs*24|1|0.19|ENSG00000109061|chr17:10504835-10504835|T/-|frameshift_variant;MYH13|p.K1396Nfs*37|1|0.46|ENSG00000006788|chr17:10312751-10312751|T/-|frameshift_variant;MYH15|p.E1364Vfs*7|1|0.04|ENSG00000144821|chr3:108414346-108414347|-/GGAGTTA|frameshift_variant;MYH15|p.F777Lfs*12|1|0.26|ENSG00000144821|chr3:108454134-108454134|A/-|frameshift_variant;MYH15|p.T1279Ifs*7|1|0.04|ENSG00000144821|chr3:108421141-108421142|-/ATAA|frameshift_variant;MYH2|p.R876Gfs*9|1|0.36|ENSG00000125414|chr17:10531704-10531704|T/-|frameshift_variant;MYH4|p.N981Tfs*16|1|0.12|ENSG00000264424|chr17:10453321-10453321|T/-|frameshift_variant;MYH4|p.Q222Hfs*6|1|0.02|ENSG00000264424|chr17:10463626-10463627|-/G|frameshift_variant;MYH7|p.I1207Tfs*26|1|0.04|ENSG00000092054|chr14:23419951-23419952|-/TGTAGTG|frameshift_variant;MYH8|p.E1123Gfs*19|1|0.39|ENSG00000133020|chr17:10400757-10400758|-/C|frameshift_variant;MYH8|p.I922Nfs*6|1|0.33|ENSG00000133020|chr17:10401709-10401710|-/T|frameshift_variant;MYH8|p.K1582Nfs*3|1|0.04|ENSG00000133020|chr17:10395349-10395350|-/G|frameshift_variant;MYH8|p.N600Ifs*5|1|0.32|ENSG00000133020|chr17:10409377-10409377|T/-|frameshift_variant;MYO1F|p.L967Cfs*94|1|0.31|ENSG00000142347|chr19:8522785-8522785|G/-|frameshift_variant;MYO1F|p.N396Kfs*13|1|0.44|ENSG00000142347|chr19:8548117-8548118|-/T|frameshift_variant;MYO5A|p.I1440Nfs*19|1|0.44|ENSG00000197535|chr15:52336477-52336478|-/T|frameshift_variant;MYO5B|p.Y287Lfs*17|1|0.31|ENSG00000167306|chr18:49984806-49984807|-/A|frameshift_variant;MYO5C|p.E1050Sfs*8|1|0.32|ENSG00000128833|chr15:52229192-52229192|C/-|frameshift_variant;MYO5C|p.I480Nfs*10|1|0.5|ENSG00000128833|chr15:52253414-52253415|-/T|frameshift_variant;MYO5C|p.L1151Wfs*19|1|0.17|ENSG00000128833|chr15:52223719-52223719|A/-|frameshift_variant;MYO5C|p.L933Hfs*33|1|0.04|ENSG00000128833|chr15:52237552-52237553|-/T|frameshift_variant;MYO5C|p.L933Sfs*35|1|0.04|ENSG00000128833|chr15:52237553-52237554|-/AAGTGGA|frameshift_variant;nc|ENSG00000078814|A7E2Y1|MYH7B;nc|ENSG00000125414|Q9UKX2-2|MYH2;nc|ENSG00000128833|Q9NQX4-2|MYO5C;nc|ENSG00000197535|Q9Y4I1-2|MYO5A;nc|ENSG00000197535|Q9Y4I1|MYO5A	67.49366992349736	0.1516260258713357	5				NaN	NaN	0	NaN	406	2643	3050
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3052	14.411	NaN	710.43	30	0	79.764	0.106	+			841	AEGKQHAL	8	28	427.23016357421875	NaN	0	427.23016357421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEGKQHAL_	ENSG00000101898|ENST00000394552|MCTS2;ENSG00000232119|ENST00000371317|MCTS1;ENST00000487133.1_1_X:119742243-119746116:+|nuORF;MCTS1|p.C144R|1|0.23|ENSG00000232119|chrX:120611044-120611044|T/C|missense_variant;nc|ENSG00000232119|Q9ULC4-2|MCTS1;nc|ENSG00000232119|Q9ULC4-3|MCTS1	31.954861631926434	1.7418937515398478	5				NaN	NaN	0	NaN	407	2643	3050
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3053	14.413	NaN	2089.8	30	0	690.29	0.037				-1	ATFMNELKN	9	29	361.84417724609375	NaN	0	361.84417724609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_ATFM(Oxidation (M))NELKN_	ENSG00000102786|ENST00000311234|INTS6;ENST00000486195.6_1_13:51961577-52026149:-|nuORF;ENST00000491723.5_1_13:51995314-52026679:-|nuORF;ENST00000491997.2_1_13:51997202-52025480:-|nuORF;ENST00000504674.1_1_5:39720798-39721572:-|nuORF;nc|ENSG00000102786|Q9UL03-2|INTS6;nc|ENSG00000102786|Q9UL03-3|INTS6	19.1035232394073	0.3723251548669699	5				NaN	NaN	0	NaN	408	2643	3050
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3083	14.507	NaN	1543.5	30	0	317.57	0.143			+	31908	QQKKKTAPA	9	37	500.3012634985862	998.5879740639724	2	500.30078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QQKKKTAPA_	REV__ENSG00000174780|ENST00000642900|SRP72;REV__ENST00000344851.4_1_6:158658370-158659030:-|nuORF;REV__nc|ENSG00000174780|O76094-2|SRP72	49.44154591367651	0.3095138337212152	5				NaN	NaN	0	NaN	423	2658	3082
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3091	14.527	NaN	2575.5	30	0	504.85	0.214			+	21672	KQAPNLQQ	8	45	463.7562950399066	NaN	0	463.7564392089844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KQAPNLQQ_	REV__ENSG00000221994|ENST00000276054|ZNF630;REV__ENST00000276054.8_1_X:47919586-47926376:-|nuORF;REV__nc|ENSG00000221994|Q2M218-2|ZNF630	65.80317337860623	1.7418937515398478	5				NaN	NaN	0	NaN	428	2661	3090
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3092	14.53	NaN	1404.9	30	0	558.28	0.035	+			41022	SVHDTVAQK	9	51	492.75929409877426	NaN	0	492.75958251953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVHDTVAQK_	ENSG00000150054|ENST00000683449|MPP7;MPP7|p.I139*|1|0.24|ENSG00000150054|chr10:28131592-28131592|T/-|frameshift_variant	65.46538089061403	0.1260090208616529	5				NaN	NaN	0	NaN	429	2661	3090
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3101	14.551	NaN	1352.5	30	0	402.22	0.142	+			48629	VTSKGAGLSK	10	45	474.2801153064324	NaN	0	474.2803039550781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTSKGAGLSK_	ENSG00000136068|ENST00000295956|FLNB;ENST00000481470.5_1_3:58155276-58156486:+|nuORF;ENST00000484981.1_1_3:58151207-58156486:+|nuORF;nc|ENSG00000136068|O75369-2|FLNB;nc|ENSG00000136068|O75369-3|FLNB;nc|ENSG00000136068|O75369-6|FLNB;nc|ENSG00000136068|O75369-7|FLNB;nc|ENSG00000136068|O75369-8|FLNB;nc|ENSG00000136068|O75369-9|FLNB	70.8162118820467	0.1459513513137803	5				NaN	NaN	0	NaN	435	2664	3100
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3108	14.569	NaN	5084	30	0	1280.8	0.215	+			49342	VVSKSGSLK	9	57	452.77676756195825	903.5389821907165	2	452.7768859863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVSKSGSLK_	ENSG00000166197|ENST00000605788|NOLC1;ENST00000477977.1_1_10:103920762-103923575:+|nuORF;nc|ENSG00000166197|Q14978-2|NOLC1;nc|ENSG00000166197|Q14978-3|NOLC1	117.81106730687013	0.02252488733980868	5				NaN	NaN	0	NaN	439	2667	3107
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3109	14.573	NaN	1133.1	30	0	292.07	0.106	+			11631	FQEDDGIPLYL	11	43	437.2132873535156	NaN	0	437.2132873535156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FQEDDGIPLYL_	nc|ENSG00000236764|O60397|COX7A2P2	25.125986553469783	0.45344013546260314	5				NaN	NaN	0	NaN	440	2667	3107
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3110	14.575	NaN	4195.2	30	0	836.29	0.037			+	15791	GVVFVLNKQI	10	45	372.8960486747184	1115.6663166243552	3	372.89605712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GVVFVLNKQI_	REV__CNOT4|p.V106I|2|0.29|ENSG00000080802|chr7:135422212-135422212|C/T|missense_variant	49.536043120802724	0.461275219792494	5				NaN	NaN	0	NaN	441	2667	3107
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3122	14.6	NaN	1565.4	30	0	224.33	0.143	+			45384	TVTKPVGGDK	10	48	501.2853299763235	NaN	0	501.2852478027344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVTKPVGGDK_	ENSG00000089009|ENST00000202773|RPL6;ENST00000445338.1_1_10:13633913-13634195:-|nuORF;ENST00000454924.1_1_7:63602236-63602701:-|nuORF;RPL6|p.K237Rfs*4|1|0.04|ENSG00000089009|chr12:112405856-112405857|TT/-|frameshift_variant	61.691277971877994	0.22046696034287383	5				NaN	NaN	0	NaN	450	2670	3121
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3133	14.627	NaN	4023.9	30	0	435.03	0.214	+			13997	GSDRDTLAK	9	58	481.7487598906276	961.4829668480552	2	481.7488098144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSDRDTLAK_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	68.84614121027924	0.14577793175421136	5				NaN	NaN	0	NaN	458	2673	3132
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3134	14.631	NaN	10202	30	0	2583.4	0.038			+	38951	SSQRRWVGVGA	11	49	401.550641371162	1201.630094713686	3	401.5508728027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSQRRWVGVGA_	REV__ENST00000467087.5_2_4:26862323-26862563:+|nuORF	30.568863376406313	0.6691487505135859	5				NaN	NaN	0	NaN	459	2673	3132
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3156	14.682	NaN	1913.2	30	0	970.54	0.214			+	48897	VVDKNPQESVL	11	33	409.8911753049873	1226.651696515162	3	409.8914794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVDKNPQESVL_	REV__ENSG00000126777|ENST00000395314|KTN1;REV__KTN1|p.A1102Gfs*15|2|0.3|ENSG00000126777|chr14:55670756-55670757|-/A|frameshift_variant;REV__KTN1|p.H994Sfs*2|1|0.35|ENSG00000126777|chr14:55659677-55659678|-/C|frameshift_variant;REV__KTN1|p.K1078Nfs*12|1|0.3|ENSG00000126777|chr14:55667292-55667292|A/-|frameshift_variant;REV__KTN1|p.K1101Rfs*18|1|0.4|ENSG00000126777|chr14:55670757-55670757|A/-|frameshift_variant;REV__KTN1|p.P993Lfs*6|1|0.36|ENSG00000126777|chr14:55659678-55659678|C/-|frameshift_variant;REV__nc|ENSG00000126777|Q86UP2-2|KTN1;REV__nc|ENSG00000126777|Q86UP2-3|KTN1;REV__nc|ENSG00000126777|Q86UP2-4|KTN1	26.749707702089633	0.7092085788826945	5				NaN	NaN	0	NaN	475	2679	3155
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3157	14.686	NaN	874.11	30	0	70.451	0.106			+	-1	YSMMDQPLL	9	43	557.25	NaN	0	557.25	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_YSMM(Oxidation (M))DQPLL_	REV__ENSG00000087111|ENST00000308360|PIGS;REV__nc|ENSG00000087111|Q96S52-2|PIGS	34.172542307311794	0.30503706118289736	5				NaN	NaN	0	NaN	476	2679	3155
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3158	14.688	NaN	744.16	30	0	184.65	0.034	+			40025	STMTSGQAR	9	23	469.72174072265625	NaN	0	469.72174072265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STMTSGQAR_	ENSG00000106609|ENST00000341567|TMEM248;nc|ENSG00000106609|Q9NWD8-2|TMEM248	29.170058357718403	0.3302935627494407	5				NaN	NaN	0	NaN	477	2679	3155
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3172	14.717	NaN	1031.9	30	0	336.24	0.214	+			48377	VTHHVSVTK	9	31	504.28509521484375	NaN	0	504.28509521484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTHHVSVTK_	ENSG00000164828|ENST00000401592|SUN1;ENST00000413171.6_1_7:892397-912965:+|nuORF;ENST00000475971.5_1_7:893033-912965:+|nuORF;nc|ENSG00000164828|O94901-5|SUN1;nc|ENSG00000164828|O94901-6|SUN1;nc|ENSG00000164828|O94901-9|SUN1;SUN1|p.E739Gfs*27|1|0.41|ENSG00000164828|chr7:872532-872533|-/G|frameshift_variant	67.49366992349736	0.1173583512313808	5				NaN	NaN	0	NaN	488	2682	3171
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3173	14.721	NaN	551.46	30	0	44.659	0.106			+	36105	SEKKKPTN	8	36	466.2646789550781	NaN	0	466.2646789550781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEKKKPTN_	REV__ENSG00000170142|ENST00000306627|UBE2E1;REV__ENST00000481622.1_1_3:23848730-23850221:+|nuORF;REV__ENST00000484048.1_1_3:23848730-23849168:+|nuORF;REV__ENST00000495141.5_1_3:23848730-23929256:+|nuORF;REV__nc|ENSG00000170142|P51965-3|UBE2E1	35.61828744233558	1.7418937515398478	5				NaN	NaN	0	NaN	489	2682	3171
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3174	14.722	NaN	1008.5	30	0	125.12	0.034	+			21302	KLSLNPKN	8	45	457.2768859863281	NaN	0	457.2768859863281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KLSLNPKN_	ENSG00000148843|ENST00000369797|PDCD11;ENST00000471061.1_1_10:105163006-105164949:+|nuORF	49.44154591367651	1.7418937515398478	5				NaN	NaN	0	NaN	490	2682	3171
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3189	14.753	NaN	1289.9	30	0	242.08	0.214	+			19461	KASAVSAIHK	10	56	506.3014831542969	NaN	0	506.3014831542969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KASAVSAIHK_	ENSG00000164077|ENST00000296473|MON1A;ENST00000486107.5_1_3:49946449-49946602:-|nuORF;nc|ENSG00000164077|Q86VX9-2|MON1A;nc|ENSG00000164077|Q86VX9-4|MON1A;nc|ENSG00000164077|Q86VX9|MON1A	73.84112541714126	0.12976974590634552	5				NaN	NaN	0	NaN	502	2685	3188
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3190	14.757	NaN	2717.4	30	0	741.46	0.106	+			4659	ATLQMLRNPA	10	30	372.205810546875	NaN	0	372.205810546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATLQMLRNPA_	ENSG00000182162|ENST00000381297|P2RY8	17.468008924990375	0.4201028297492154	5				NaN	NaN	0	NaN	503	2685	3188
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3191	14.759	NaN	2244.5	30	0	649.79	0.033	+			15356	GTVSKVTGK	9	53	438.76155116529964	875.5085493973993	2	438.7615966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTVSKVTGK_	ENSG00000196526|ENST00000420658|AFAP1;nc|ENSG00000196526|Q8N556|AFAP1	65.15724298150197	0.17062369902793603	5				NaN	NaN	0	NaN	504	2685	3188
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3203	14.793	NaN	2578.5	30	0	410.59	0.143	+			39379	STDKQTCLK	9	60	512.2604028678346	1022.5062528024692	2	512.2615966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STDKQTCLK_	ENSG00000198788|ENST00000675028|MUC2;nc|ENSG00000198788|Q02817|MUC2	70.8162118820467	0.13725933411854815	5				NaN	NaN	0	NaN	510	2691	3202
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3210	14.812	NaN	9723.1	30	0	860.8	0.145			+	16117	HDQTQGQTQQ	10	75	585.760319408786	1169.506085884372	2	585.76171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HDQTQGQTQQ_	REV__MAGEB3|p.R19Q|1|0.13|ENSG00000198798|chrX:30235980-30235980|G/A|missense_variant	79.71258880314673	0.19796908725841375	5				NaN	NaN	0	NaN	514	2694	3209
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3215	14.828	NaN	872.7	30	0	130.28	0.143	+			22727	KVAVATPAKK	10	37	506.8295646593139	NaN	0	506.8294372558594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVAVATPAKK_	ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232323706-232327997:-|nuORF	49.46582953369473	0.30897958348462834	5				NaN	NaN	0	NaN	516	2697	3214
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3234	14.876	NaN	2699	30	0	1171.5	0.141	+			45899	VAQENAVK	8	41	429.73748046209806	857.4604079909961	2	429.7378845214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VAQENAVK_	ENSG00000168769|ENST00000380013|TET2;nc|ENSG00000168769|Q6N021-2|TET2;nc|ENSG00000168769|Q6N021-3|TET2;TET2|p.M695Tfs*4|1|0.41|ENSG00000168769|chr4:105236026-105236029|TGTC/-|frameshift_variant;TET2|p.N202Tfs*5|1|0.32|ENSG00000168769|chr4:105234543-105234543|A/-|frameshift_variant;TET2|p.V1949Sfs*7|1|0.31|ENSG00000168769|chr4:105276348-105276349|-/A|frameshift_variant	60.97194046774394	0.49215940876911696	5				NaN	NaN	0	NaN	529	2703	3233
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3240	14.893	NaN	3406.2	30	0	706.56	0.141	+			44329	TSGAISITQ	9	46	439.23484856881976	876.4551442044395	2	439.2351989746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSGAISITQ_	ENSG00000148600|ENST00000623527|CDHR1;nc|ENSG00000148600|Q96JP9-2|CDHR1	74.25504064058377	0.12238981753128622	5				NaN	NaN	0	NaN	532	2706	3239
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3246	14.909	NaN	1011.5	30	0	182.1	0.145	+			20727	KGSSNSYAIKK	11	39	591.8287006828818	1181.6428484325636	2	591.8292236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KGSSNSYAIKK_	ENSG00000083845|ENST00000196551|RPS5	80.870553263523	0.1451153566872633	5				NaN	NaN	0	NaN	535	2709	3245
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3258	14.945	NaN	1386.7	30	0	280.26	0.145			+	9320	EIEKGNKDKS	10	40	574.3008843148709	1146.5872156965418	2	574.302001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EIEKGNKDKS_	REV__tr|U7SGF5|U7SGF5_FUSNUDUF4015domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02285PE=4SV=1	23.52269567125451	0.6877354443478558	5				NaN	NaN	0	NaN	541	2715	3257
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3265	14.963	NaN	3283.2	30	0	1255.2	0.145			+	8002	DTISLTERVN	10	37	383.2028790203392	1146.5868076612176	3	383.2030029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DTISLTERVN_	REV__tr|U7SVN4|U7SVN4_FUSNULipopolysaccharideexportsystemATP-bindingproteinLptBOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01284PE=3SV=1	32.81241826257853	0.6118718159329168	5				NaN	NaN	0	NaN	545	2718	3264
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3272	14.982	NaN	34213	30	0	5797.4	0.214	+			6342	AVTKYTSSK	9	87	492.7712893559361	983.5280257786723	2	492.7714538574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVTKYTSSK_	ENSG00000146047|ENST00000274764|H2BC1;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000196890|ENST00000693095|H2BC26;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000436555.1_1_1:228651916-228652012:-|nuORF;nc|ENSG00000203814|Q5QNW6-2|H2BC18;nc|ENSG00000285480|A0A2R8Y619|H2BK1	178.54760496737404	0.0014418427517892064	5				NaN	NaN	0	NaN	549	2721	3271
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3273	14.986	NaN	870.06	30	0	233.9	0.034			+	18629	ISTEDAIR	8	34	452.74002527589073	903.4654976185815	2	452.7402648925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ISTEDAIR_	REV__ENSG00000166024|ENST00000298999|R3HCC1L;REV__nc|ENSG00000166024|Q7Z5L2-2|R3HCC1L;REV__nc|ENSG00000166024|Q7Z5L2|R3HCC1L;REV__R3HCC1L|p.E618Rfs*66|1|0.43|ENSG00000166024|chr10:98231535-98231535|A/-|frameshift_variant;REV__R3HCC1L|p.L487Wfs*8|1|0.1|ENSG00000166024|chr10:98209569-98209569|T/-|frameshift_variant	31.954861631926434	0.7126016770032289	5				NaN	NaN	0	NaN	550	2721	3271
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3309	15.07	NaN	12876	30	0	3473.3	0.214			+	32068	QSARLAEE	8	60	452.22986065549475	NaN	0	452.70440673828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QSARLAEE_	REV__ENSG00000142621|ENST00000688493|FHAD1;REV__nc|ENSG00000142621|B1AJZ9-3|FHAD1;REV__nc|ENSG00000142621|B1AJZ9-4|FHAD1;REV__nc|ENSG00000142621|B1AJZ9|FHAD1	35.61828744233558	1.7418937515398478	5				NaN	NaN	0	NaN	577	2730	3308
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3310	15.074	NaN	7637.5	30	0	4122.3	0.106			+	43906	TNLPAARERNP	11	42	413.55825956886025	1237.6529493067808	3	413.5582580566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TNLPAARERNP_	REV__MAST4|p.S1880Afs*59|1|0.41|ENSG00000069020|chr5:67164811-67164811|C/-|frameshift_variant	23.37791116691581	0.7445759747191538	5				NaN	NaN	0	NaN	578	2730	3308
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3311	15.076	NaN	1005.6	30	0	152.18	0.035	+			35991	SEHPSTSKM	9	37	502.2294921875	NaN	0	502.2294921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEHPSTSKM_	ENSG00000102241|ENST00000218364|HTATSF1;HTATSF1|p.K555Nfs*38|1|0.74|ENSG00000102241|chrX:136511406-136511406|A/-|frameshift_variant;HTATSF1|p.V610Cfs*2|1|0.32|ENSG00000102241|chrX:136511568-136511568|A/-|frameshift_variant	62.107414245175825	0.1403307765918332	5				NaN	NaN	0	NaN	579	2730	3308
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3318	15.094	NaN	2149.4	30	0	500.77	0.143	+			34706	RVTYPAKAK	9	48	517.3113303596226	1032.6081077860451	2	517.3124389648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVTYPAKAK_	ENSG00000118705|ENST00000237530|RPN2;nc|ENSG00000118705|P04844-2|RPN2	64.20726635412375	0.17854274437659667	5				NaN	NaN	0	NaN	583	2733	3317
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3341	15.157	NaN	6659.4	30	0	1739.6	0.214	+			50756	YEKKAAKL	8	59	475.78743639392223	949.5603198546445	2	476.2889404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YEKKAAKL_	ENSG00000189403|ENST00000341423|HMGB1;nc|ENSG00000067066|P23497|SP100	69.6276240434122	0.4100012001731381	5				NaN	NaN	0	NaN	597	2742	3340
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3342	15.16	NaN	753.7	30	0	94.922	0.036			+	48360	VTGTNTLKGNV	11	30	552.3082275390625	NaN	0	552.3082275390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTGTNTLKGNV_	REV__ENSG00000187210|ENST00000376730|GCNT1;REV__GCNT1|p.I305Nfs*15|1|0.52|ENSG00000187210|chr9:76503288-76503289|-/A|frameshift_variant;REV__GCNT1|p.S284Ifs*10|1|0.02|ENSG00000187210|chr9:76503230-76503231|-/A|frameshift_variant	42.86426827375447	0.36657022113551535	5				NaN	NaN	0	NaN	598	2742	3340
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3351	15.181	NaN	8382.8	30	0	1743.1	0.214	+			46826	VIDRQIEK	8	51	334.19754845290095	999.5708159589028	3	334.1978759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VIDRQIEK_	tr|U7SL73|U7SL73_FUSNURibonucleaseYOS=FusobacteriumnucleatumCTI-5OX=1316586GN=rnyPE=3SV=1	39.252832667884924	0.6609488554722044	5				NaN	NaN	0	NaN	604	2745	3350
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3352	15.184	NaN	1491.6	30	0	242.6	0.033	+			15612	GVKGGDVPK	9	43	428.7479741093463	855.4813952854926	2	428.7482604980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GVKGGDVPK_	ENSG00000198771|ENST00000367854|RCSD1;nc|ENSG00000198771|Q6JBY9-2|RCSD1;RCSD1|p.P353L|1|0.14|ENSG00000198771|chr1:167697682-167697682|C/T|missense_variant	67.49366992349736	0.1516260258713357	5				NaN	NaN	0	NaN	605	2745	3350
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3383	15.262	NaN	16837	30	0	5931.6	0.214	+			44595	TTCSKVFKK	9	71	366.87075242633216	1097.5904278791966	3	366.87091064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_TTC(Carbamidomethyl (C))SKVFKK_	ENSG00000167625|ENST00000301215|ZNF526	54.722347961057174	0.257609425301511	5				NaN	NaN	0	NaN	627	2754	3382
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3384	15.266	NaN	2002.7	30	0	1063.5	0.106			+	29496	PCYKRAAKFAN	11	29	423.55810546875	NaN	0	423.55810546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PCYKRAAKFAN_	REV__ENSG00000196236|ENST00000357137|XPNPEP3;REV__nc|ENSG00000196236|Q9NQH7-2|XPNPEP3;REV__nc|ENSG00000196236|Q9NQH7-4|XPNPEP3	20.030474535948922	0.456735970842152	5				NaN	NaN	0	NaN	628	2754	3382
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3385	15.268	NaN	8450	30	0	902.64	0.035	+			20454	KEVENVRK	8	72	501.2906585118747	1000.5667640905494	2	501.29119873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEVENVRK_	tr|U7SQY6|U7SQY6_FUSNUDNAmethylaseadenine-specificdomain-containingprotein(Fragment)OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01632PE=4SV=1	106.68306549817024	0.24699173477327382	5				NaN	NaN	0	NaN	629	2754	3382
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3402	15.302	NaN	15732	30	0	8121.8	0.215	+			5222	ATTTTVTTK	9	57	462.25564576925257	922.4967386053052	2	462.2555236816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATTTTVTTK_	ENSG00000163349|ENST00000426820|HIPK1;HIPK1|p.N462*|1|0.27|ENSG00000163349|chr1:113955620-113955621|-/T|frameshift_variant;nc|ENSG00000163349|Q86Z02-2|HIPK1	129.42129120953632	0.01549634589885217	5				NaN	NaN	0	NaN	643	2757	3401
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3403	15.306	NaN	2488.1	30	0	1842.3	0.034			+	47110	VLMACLKQ	8	36	453.25016637495537	NaN	0	453.2505798339844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VLMACLKQ_	REV__ENSG00000205029|ENST00000378396|OR5D16	20.481830146152948	1.741893751539848	5				NaN	NaN	0	NaN	644	2757	3401
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3419	15.338	NaN	2036.2	30	0	333.34	0.214			+	21775	KQSRRRIE	8	56	536.8187866210938	NaN	0	536.8187866210938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KQSRRRIE_	REV__ENSG00000136111|ENST00000377636|TBC1D4;REV__nc|ENSG00000136111|O60343-2|TBC1D4;REV__nc|ENSG00000136111|O60343-3|TBC1D4;REV__TBC1D4|p.F159Sfs*16|1|0.14|ENSG00000136111|chr13:75481292-75481292|A/-|frameshift_variant;REV__TBC1D4|p.H517Pfs*9|1|0.07|ENSG00000136111|chr13:75341186-75341187|-/TCTTTAG|frameshift_variant;REV__TBC1D4|p.S219Qfs*19|1|0.23|ENSG00000136111|chr13:75362452-75362452|G/-|frameshift_variant	52.936696900407355	1.7418937515398478	5				NaN	NaN	0	NaN	657	2760	3418
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3420	15.342	NaN	4221.6	30	0	758.72	0.106	+			2859	ASAPANVSK	9	50	422.7299662161631	843.4453794991263	2	422.7295227050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASAPANVSK_	ENSG00000135597|ENST00000450536|REPS1;nc|ENSG00000135597|Q96D71-2|REPS1;nc|ENSG00000135597|Q96D71-3|REPS1;nc|ENSG00000135597|Q96D71-4|REPS1	120.30596017624542	0.02101454110788768	5				NaN	NaN	0	NaN	658	2760	3418
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3421	15.344	NaN	363.51	30	0	104.28	0.035	+			32319	QTRVIKKN	8	26	493.8083190917969	NaN	0	493.8083190917969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QTRVIKKN_	ENSG00000139151|ENST00000266505|PLCZ1;nc|ENSG00000139151|Q86YW0-2|PLCZ1;nc|ENSG00000139151|Q86YW0-3|PLCZ1	16.473147378115264	1.7418937515398478	5				NaN	NaN	0	NaN	659	2760	3418
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3435	15.373	NaN	10401	30	0	2753.2	0.214				-1	PVWVIWMR	8	43	368.2012605477372	1101.5819522434117	3	368.2014465332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_PVWVIWM(Oxidation (M))R_	CD1E|p.M243I|1|0.34|ENSG00000158488|chr1:158355930-158355930|G/A|missense_variant	38.80614096846853	0.6637206697844082	5				NaN	NaN	0	NaN	670	2763	3434
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3436	15.377	NaN	1990.6	30	0	677.16	0.038	+			33458	RIQEHFNKK	9	29	400.5598547032032	1198.6577347098096	3	400.559814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RIQEHFNKK_	ENSG00000157349|ENST00000288071|DDX19B;ENSG00000168872|ENST00000302243|DDX19A;ENST00000569319.5_1_16:70399881-70405886:+|nuORF;ENST00000569771.5_1_16:70395504-70405886:+|nuORF;nc|ENSG00000168872|Q9NUU7-2|DDX19A;nc|ENSG00000260537|Q9UMR2-2|DDX19B;nc|ENSG00000260537|Q9UMR2-3|DDX19B;nc|ENSG00000260537|Q9UMR2-4|DDX19B	37.81151784470057	0.4459294069877048	5				NaN	NaN	0	NaN	671	2763	3434
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3450	15.406	NaN	13018	30	0	2352.9	0.214	+			41604	SVQHVDAAEK	10	70	542.2747583702123	1082.5349638072246	2	542.2764282226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVQHVDAAEK_	ENST00000585682.5_1_4:159092526-159092595:-|nuORF	150.15188659993407	0.008468567113416427	5				NaN	NaN	0	NaN	682	2766	3449
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3451	15.41	NaN	2590.8	30	0	1447.7	0.106	+			406	AASSSSLEK	9	44	440.2255042769469	878.4364556206938	2	440.22528076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AASSSSLEK_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196834|ENST00000451531|POTEI;ENST00000417985.1_1_X:46147855-46148119:-|nuORF;ENST00000418987.2_1_9:103493819-103494230:+|nuORF;ENST00000423183.1_1_3:12112396-12112453:+|nuORF;ENST00000450451.1_1_1:238090483-238090852:+|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2	60.11826168202944	0.21262886028301267	5				NaN	NaN	0	NaN	683	2766	3449
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3452	15.412	NaN	7597	30	0	3553.3	0.106			+	33931	RSAFSLTLR	9	52	350.87308478659344	1049.5974249599803	3	350.87347412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RSAFSLTLR_	REV__ENSG00000133056|ENST00000684373|PIK3C2B	34.172542307311794	0.4838870758800184	5				NaN	NaN	0	NaN	684	2766	3449
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3453	15.413	NaN	1079.9	30	0	515.99	0.038				-1	MQCDKSIIVC	10	19	606.7723975519652	1211.5302421707304	2	606.772705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))QCDKSIIVC(Carbamidomethyl (C))_	ENST00000369528.9_2_1:115314278-115314449:-|nuORF	20.94693142431847	0.7087701759873708	5				NaN	NaN	0	NaN	685	2766	3449
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3464	15.437	NaN	1538.9	30	0	496.5	0.214	+			39304	STASSKSEGL	10	41	483.740467949983	NaN	0	483.740478515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STASSKSEGL_	CA12|p.N162S|1|0.34|ENSG00000074410|chr15:63342042-63342042|T/C|missense_variant	54.722347961057174	0.27574710963839943	5				NaN	NaN	0	NaN	693	2769	3463
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3465	15.441	NaN	746.77	30	0	176.4	0.106	+			29551	PEQDRLLQ	8	25	499.7671813964844	NaN	0	499.7671813964844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PEQDRLLQ_	ABCA7|p.G1573Afs*82|1|0.27|ENSG00000064687|chr19:1057033-1057033|G/-|frameshift_variant;ENSG00000064687|ENST00000263094|ABCA7;nc|ENSG00000064687|Q8IZY2-2|ABCA7	29.14955571784316	1.7418937515398478	5				NaN	NaN	0	NaN	694	2769	3463
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3466	15.443	NaN	773.63	30	0	164.03	0.033			+	12509	GEENNKVL	8	35	451.7323392625497	NaN	0	451.7325439453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEENNKVL_	REV__ENSG00000163873|ENST00000373091|GRIK3;REV__nc|ENSG00000163873|Q13003-2|GRIK3	45.9519527083369	1.7418937515398478	5				NaN	NaN	0	NaN	695	2769	3463
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3494	15.504	NaN	25723	30	0	2703	0.214				-1	RYRFQSNHMD	10	82	457.20766391199857	1368.6011623361958	3	457.2079772949219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_RYRFQSNHM(Oxidation (M))D_	ENSG00000136371|ENST00000258874|MTHFS;nc|ENSG00000136371|P49914-2|MTHFS	37.50817390946774	0.5721060100277453	5				NaN	NaN	0	NaN	717	2775	3493
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3495	15.508	NaN	1634.3	30	0	306.91	0.106	+			47809	VSKAVANSK	9	49	452.26658980962003	902.5186266860401	2	452.26654052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSKAVANSK_	ENSG00000203972|ENST00000371197|GLYATL3	47.657333605630114	0.33044192980041115	5				NaN	NaN	0	NaN	718	2775	3493
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3496	15.51	NaN	4447.8	30	0	866.24	0.034	+			20675	KGNKELLQ	8	53	465.27430310141716	928.5340532696343	2	465.2745056152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KGNKELLQ_	ENSG00000113209|ENST00000231134|PCDHB5	87.75429964447693	0.2842685068779738	5				NaN	NaN	0	NaN	719	2775	3493
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3506	15.534	NaN	2695.1	30	0	1438.9	0.142	+			17137	HSSGPMVEK	9	51	486.23406982999296	970.4535867267859	2	486.2341003417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HSSGPMVEK_	ENSG00000069509|ENST00000378045|FUNDC1;ENST00000483115.1_1_X:44383446-44401387:-|nuORF;FUNDC1|p.F37C|1|0.33|ENSG00000069509|chrX:44542020-44542020|A/C|missense_variant	67.49366992349736	0.1516260258713357	5				NaN	NaN	0	NaN	726	2778	3505
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3532	15.595	NaN	1923.6	30	0	794.01	0.214	+			41004	SVGSASSVK	9	26	411.2212167193719	820.4278805055438	2	411.22222900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVGSASSVK_	ENSG00000144840|ENST00000273375|RABL3	42.396135135203025	0.392153681582562	5				NaN	NaN	0	NaN	746	2784	3531
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3533	15.598	NaN	1345.3	30	0	234.42	0.035			+	30819	QEEKKGATR	9	46	523.7851930443637	1045.5558331555274	2	524.28759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QEEKKGATR_	REV__CCDC168|p.G4714Rfs*2|1|0.22|ENSG00000175820|chr13:102736557-102736558|-/T|frameshift_variant;REV__CCDC168|p.G6141Lfs*25|1|0.03|ENSG00000175820|chr13:102732276-102732277|-/AGGAAAAATCACCAAACACTAG|frameshift_variant;REV__CCDC168|p.K5937Nfs*10|1|0.37|ENSG00000175820|chr13:102732886-102732886|T/-|frameshift_variant;REV__CCDC168|p.K6236Nfs*3|1|0.42|ENSG00000175820|chr13:102731989-102731989|T/-|frameshift_variant;REV__CCDC168|p.L5048Ifs*6|1|0.12|ENSG00000175820|chr13:102735555-102735556|-/T|frameshift_variant;REV__CCDC168|p.L5234*|1|0.12|ENSG00000175820|chr13:102735001-102735001|A/-|frameshift_variant;REV__CCDC168|p.M5025Cfs*8|1|0.29|ENSG00000175820|chr13:102735624-102735624|T/-|frameshift_variant;REV__ENSG00000175820|ENST00000322527|CCDC168	88.17693792209575	0.07000514020414955	5				NaN	NaN	0	NaN	747	2784	3531
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3541	15.617	NaN	29575	30	0	5870.5	0.214	+			39063	SSSRAVVVK	9	70	466.7796538688035	931.544754804407	2	466.77947998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSSRAVVVK_	CON__H-INV:HIT000292931;CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	93.1432384553994	0.056003526918089595	5				NaN	NaN	0	NaN	752	2787	3540
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3542	15.62	NaN	3775	30	0	647.79	0.106	+			41748	SVSKNVNVK	9	58	487.784703001656	973.554853070112	2	487.78485107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVSKNVNVK_	ENSG00000198589|ENST00000651943|LRBA;LRBA|p.L2590*|1|0.41|ENSG00000198589|chr4:150310342-150310342|A/-|frameshift_variant;LRBA|p.T2011Qfs*11|1|0.19|ENSG00000198589|chr4:150599022-150599022|T/-|frameshift_variant;nc|ENSG00000198589|P50851-2|LRBA;nc|ENSG00000198589|P50851|LRBA	132.757866228626	0.013877640931359021	5				NaN	NaN	0	NaN	753	2787	3540
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3543	15.622	NaN	2803.7	30	0	319.86	0.036	+			6468	AVYKTHVEK	9	58	537.8000668305147	1073.5855807278292	2	537.8011474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVYKTHVEK_	ENSG00000196954|ENST00000444739|CASP4;ENST00000529565.1_1_11:104819221-104819389:-|nuORF;ENST00000534356.1_1_11:104817674-104819389:-|nuORF;nc|ENSG00000196954|P49662-2|CASP4	88.17693792209575	0.07000514020414955	5				NaN	NaN	0	NaN	754	2787	3540
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3554	15.646	NaN	412.73	30	0	157.72	0.214			+	32773	RARLPPNM	8	18	477.7704162597656	NaN	0	477.7704162597656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RARLPPNM_	REV__tr|U7SXB5|U7SXB5_FUSNUDihydroorotaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=pyrCPE=3SV=1	8.231297230196988	1.7418937515398478	5				NaN	NaN	0	NaN	762	2790	3553
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3555	15.649	NaN	1282.5	30	0	215.91	0.038			+	-1	QVGILINKMK	10	30	387.2350158691406	NaN	0	387.2350158691406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_QVGILINKM(Oxidation (M))K_	REV__tr|U7SIU9|U7SIU9_FUSNUarginaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02241PE=3SV=1	17.468008924990375	0.4201028297492154	5				NaN	NaN	0	NaN	763	2790	3553
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3571	15.69	NaN	5809.3	30	0	1594.2	0.214	+			42345	TAHDQKTAL	9	60	492.7590695055001	983.5035860778003	2	492.75921630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAHDQKTAL_	ENSG00000142875|ENST00000370685|PRKACB	120.8684288430529	0.02067403653475984	5				NaN	NaN	0	NaN	773	2796	3570
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3572	15.694	NaN	815.34	30	0	196.68	0.106				-1	SVACPGAQK	9	28	459.22923242764847	916.443911922097	2	459.2293395996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SVAC(Carbamidomethyl (C))PGAQK_	ENSG00000127993|ENST00000265732|RBM48;nc|ENSG00000127993|Q5RL73-2|RBM48	37.15910966729921	0.4535818937225704	5				NaN	NaN	0	NaN	774	2796	3570
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3573	15.696	NaN	2980.6	30	0	328.43	0.034			+	13471	GLLDTVAKR	9	55	486.795125346327	971.575697759454	2	486.79534912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GLLDTVAKR_	REV__ENSG00000106299|ENST00000223023|WASL;REV__WASL|p.R141Q|2|0.3|ENSG00000106299|chr7:123706291-123706291|C/T|missense_variant;REV__WASL|p.V422Wfs*17|2|0.27|ENSG00000106299|chr7:123692431-123692431|T/-|frameshift_variant	39.252832667884924	0.4290233611298554	5				NaN	NaN	0	NaN	775	2796	3570
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3594	15.745	NaN	78874	30	0	15206	0.199	+			6333	AVTKYTSAK	9	94	484.7738318482921	967.5331107633842	2	484.77392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVTKYTSAK_	ENSG00000124635|ENST00000339812|H2BC11;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000234289|ENST00000599962|H2BC12L	157.3448221729694	0.005157168637584854	5				NaN	NaN	0	NaN	790	2802	3593
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3595	15.749	NaN	11975	30	0	4320.6	0.106	+			40709	SVCEGKGLHR	10	51	381.52905515294134	1141.565336059024	3	381.52923583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SVC(Carbamidomethyl (C))EGKGLHR_	ENSG00000161011|ENST00000389805|SQSTM1;ENST00000466342.1_1_5:179250916-179260288:+|nuORF;nc|ENSG00000161011|Q13501-2|SQSTM1	74.1650062923329	0.2432923583094885	5				NaN	NaN	0	NaN	791	2802	3593
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3596	15.751	NaN	1295.5	30	0	476.3	0.033	+			48188	VTAGGWRR	8	24	451.7503628660463	901.4861727988927	2	451.7505187988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTAGGWRR_	ENST00000524669.5_1_11:57416309-57416543:-|nuORF	25.450171626174864	0.7628259754767981	5				NaN	NaN	0	NaN	792	2802	3593
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3605	15.771	NaN	2121	30	0	623.1	0.214	+			27855	MTGSSAPCK	9	42	441.1959927391024	880.3774325450048	2	441.1961669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MTGSSAPCK_	ENST00000392001.6_1_2:238499129-238499162:-|nuORF	52.936696900407355	0.27249468807391813	5				NaN	NaN	0	NaN	798	2805	3604
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3606	15.774	NaN	718.81	30	0	88.767	0.034			+	-1	LMIDRPIS	8	37	480.76467449814396	NaN	0	480.7655029296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LM(Oxidation (M))IDRPIS_	REV__ENSG00000172399|ENST00000307128|MYOZ2	21.9598887501803	1.7418937515398478	5				NaN	NaN	0	NaN	799	2805	3604
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3620	15.813	NaN	4714	30	0	768.38	0.149	+			1055	AEKREHEKEVL	11	48	456.58055863562834	1366.719846507085	3	456.91473388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEKREHEKEVL_	ENSG00000117632|ENST00000455785|STMN1;ENST00000465604.1_1_1:26227509-26228203:-|nuORF;ENST00000485226.1_1_1:26227942-26230296:-|nuORF;nc|ENSG00000117632|P16949-2|STMN1	37.50817390946774	0.5920388381045607	5				NaN	NaN	0	NaN	807	2811	3619
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3643	15.868	NaN	902.74	30	0	214.4	0.14			+	42187	TAAAVAAVGA	10	39	401.2272703720295	NaN	0	401.22760009765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAAAVAAVGA_	REV__ENST00000491165.5_2_3:113396224-113415451:-|nuORF	53.351449002276354	0.2844141321977336	5				NaN	NaN	0	NaN	824	2817	3642
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3653	15.892	NaN	796.85	30	0	371.87	0.142	+			29732	PHPLTSRP	8	23	452.7535211739407	NaN	0	452.75390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PHPLTSRP_	ENST00000373109.6_1_10:73818878-73819025:-|nuORF	25.450171626174864	1.7418937515398478	5				NaN	NaN	0	NaN	831	2820	3652
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3663	15.915	NaN	2136.3	30	0	348.25	0.145	+			50566	YAVHLQFTL	9	33	364.53552181867576	NaN	0	364.2013244628906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YAVHLQFTL_	AGMO|p.N193T|1|0.39|ENSG00000187546|chr7:15418589-15418589|T/G|missense_variant	35.61828744233558	0.29773779453147337	5				NaN	NaN	0	NaN	838	2823	3662
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3672	15.938	NaN	14254	30	0	3736.9	0.214	+			22932	KVQDVKKTIQK	11	71	438.94176511770104	1313.8034659533032	3	438.9419860839844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVQDVKKTIQK_	ENSG00000133706|ENST00000394434|LARS1;ENST00000508667.5_1_5:145522961-145531505:-|nuORF;nc|ENSG00000133706|Q9P2J5-2|LARS1	70.8162118820467	0.22893521292419713	5				NaN	NaN	0	NaN	844	2826	3671
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3673	15.941	NaN	3759.7	30	0	1007.7	0.106			+	45413	TVVLLYLIE	9	45	354.8853936130413	1061.6343514393238	3	354.8855895996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVVLLYLIE_	REV__L1MB7_dup19903|chr17:40875288-40875575:+|4.471230206686413|0.3704688365676228|3.59|475.0|20|3|anti-sense	26.69291269510374	0.5537881896960711	5				NaN	NaN	0	NaN	845	2826	3671
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3674	15.943	NaN	1525.4	30	0	265.02	0.106	+			29694	PGVPRDAPT	9	40	455.24306253246647	908.471572131733	2	455.243408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PGVPRDAPT_	ENST00000547188.1_1_12:108154376-108154610:-|nuORF;ENST00000550376.5_1_12:108154376-108155011:-|nuORF	47.91560031466742	0.327412564698279	5				NaN	NaN	0	NaN	846	2826	3671
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3675	15.945	NaN	897.86	30	0	213.41	0.034				-1	RRTPTCPA	8	45	479.74782580548487	957.4810986777698	2	479.7480163574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_RRTPTC(Carbamidomethyl (C))PA_	IRAK1|p.P540Lfs*53|2|0.29|ENSG00000184216|chrX:154013354-154013354|G/-|frameshift_variant	45.9519527083369	0.6193794311207887	5				NaN	NaN	0	NaN	847	2826	3671
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3686	15.969	NaN	5900.8	30	0	922.26	0.147				-1	RTCWETTKK	9	73	403.8729577549451	1208.5970438650354	3	403.87335205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_RTC(Carbamidomethyl (C))WETTKK_	ENST00000504956.5_1_4:87869676-87967907:+|nuORF;ENST00000511442.1_2_4:87869713-87967910:+|nuORF	37.59989570853033	0.44841164992386345	5				NaN	NaN	0	NaN	855	2829	3685
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3695	15.991	NaN	1981.2	30	0	528.82	0.214	+			29202	NVNEPATTK	9	50	487.25084329537873	972.4871336575575	2	487.2515869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NVNEPATTK_	ENSG00000116906|ENST00000366647|GNPAT;nc|ENSG00000116906|O15228-2|GNPAT	54.722347961057174	0.257609425301511	5				NaN	NaN	0	NaN	861	2832	3694
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3696	15.994	NaN	897.36	30	0	159.5	0.05				-1	 	0	43	662.6428833007812	NaN	0	662.6428833007812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	862	2832	3694
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3710	16.024	NaN	25255	30	0	6514.8	0.214	+			41864	SVTGSAVSK	9	49	418.2295202046836	834.4444874761672	2	418.2296142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVTGSAVSK_	ENSG00000073921|ENST00000393346|PICALM;nc|ENSG00000073921|Q13492-2|PICALM;nc|ENSG00000073921|Q13492-3|PICALM;nc|ENSG00000073921|Q13492-5|PICALM;PICALM|p.L275Gfs*3|1|0.14|ENSG00000073921|chr11:86003436-86003437|-/TTCC|frameshift_variant	96.0336014099291	0.047854655524928534	5				NaN	NaN	0	NaN	873	2835	3709
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3711	16.027	NaN	1676.2	30	0	337.58	0.106	+			41710	SVSDPGQAR	9	38	458.7275174111705	915.440481889141	2	458.727783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVSDPGQAR_	nc|ENSG00000157800|Q8NCC5-3|SLC37A3	69.6276240434122	0.14239879520340665	5				NaN	NaN	0	NaN	874	2835	3709
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3712	16.029	NaN	1805.2	30	0	440.98	0.035			+	9216	EGSGVTLLRL	10	42	522.8066557304815	1043.5987585277628	2	522.8087768554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EGSGVTLLRL_	REV__ENSG00000196440|ENST00000423738|ARMCX4	45.97224482568171	0.49411383603842696	5				NaN	NaN	0	NaN	875	2835	3709
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3730	16.067	NaN	5268.4	30	0	1575.5	0.214			+	36925	SIKISKVVQ	9	45	334.5499572753906	NaN	0	334.5499572753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIKISKVVQ_	REV__ENST00000531771.5_1_11:85718509-85733504:-|nuORF	37.81151784470057	0.28666463014928195	5				NaN	NaN	0	NaN	890	2838	3729
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3731	16.07	NaN	1423.9	30	0	173.23	0.106	+			44400	TSLLPDRK	8	48	465.27393802908284	928.5333231249657	2	465.2744445800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TSLLPDRK_	ENSG00000198839|ENST00000361822|ZNF277	60.97194046774394	0.49215940876911696	5				NaN	NaN	0	NaN	891	2838	3729
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3732	16.072	NaN	682.03	30	0	94.981	0.032	+			40531	SVAAALAASG	10	35	409.2243957519531	NaN	0	409.2243957519531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVAAALAASG_	ENST00000560302.5_1_15:85923893-85923983:+|nuORF	32.81241826257853	0.3924360933802784	5				NaN	NaN	0	NaN	892	2838	3729
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3744	16.098	NaN	5459.6	30	0	639.71	0.214	+			33786	RQEEGLRAG	9	63	508.2676235602777	1014.5206941873554	2	508.2676696777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RQEEGLRAG_	CDH2|p.H511R|1|0.43|ENSG00000170558|chr18:27990163-27990163|T/C|missense_variant	51.19269402634007	0.2889735674168909	5				NaN	NaN	0	NaN	901	2841	3743
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3745	16.101	NaN	3960.7	30	0	948.39	0.035	+			22951	KVQSKVNLK	9	63	522.3317348150094	1042.6489166968188	2	522.3322143554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVQSKVNLK_	DYNC1H1|p.F2635Lfs*67|1|0.16|ENSG00000197102|chr14:102017141-102017141|T/-|frameshift_variant;DYNC1H1|p.G1902Vfs*27|2|0.27|ENSG00000197102|chr14:102006154-102006154|G/-|frameshift_variant;DYNC1H1|p.K3112Hfs*3|1|0.31|ENSG00000197102|chr14:102027998-102027999|-/TCACAAG|frameshift_variant;DYNC1H1|p.W4201Gfs*43|1|0.42|ENSG00000197102|chr14:102043958-102043958|G/-|frameshift_variant;ENSG00000197102|ENST00000360184|DYNC1H1	141.52041321563706	0.009766778904176347	5				NaN	NaN	0	NaN	902	2841	3743
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3755	16.123	NaN	1551.1	30	0	305.46	0.141			+	12201	GAPSSSPPR	9	35	428.21920525194395	854.4238575706879	2	428.2196960449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GAPSSSPPR_	REV__ENST00000309909.9_2_12:117466288-117466417:+|nuORF	44.116797842482775	0.37197099687881774	5				NaN	NaN	0	NaN	909	2844	3754
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3768	16.152	NaN	6158.8	30	0	1758.9	0.214	+			6458	AVYGQKEIHRK	11	56	443.5857193323512	1327.7353285972536	3	443.5860290527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVYGQKEIHRK_	ENSG00000145907|ENST00000356245|G3BP1;ENST00000413279.1_1_2:136269117-136269381:-|nuORF;ENST00000519832.1_1_5:151166169-151170647:+|nuORF;nc|ENSG00000145907|Q13283-2|G3BP1	29.170058357718403	0.683821074385409	5				NaN	NaN	0	NaN	919	2847	3767
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3769	16.156	NaN	1272.6	30	0	432.29	0.034	+			3427	ASQKVTISK	9	54	481.2873460372804	NaN	0	481.28814697265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASQKVTISK_	CACUL1|p.Y368Tfs*100|1|0.52|ENSG00000151893|chr10:118686137-118686137|C/-|frameshift_variant;ENST00000369151.7_1_10:120445350-120445566:-|nuORF	47.227680397652996	0.22579850615619718	5				NaN	NaN	0	NaN	920	2847	3767
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3787	16.192	NaN	5950.9	30	0	1248.7	0.214	+			23124	KVVVSPTK	8	53	429.2761336131911	856.5377142931823	2	429.27618408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVVVSPTK_	ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232323706-232327997:-|nuORF	124.08010499294276	0.22872207833199332	5				NaN	NaN	0	NaN	935	2850	3786
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3788	16.196	NaN	2955.5	30	0	1110.5	0.106	+			14140	GSMKENISK	9	51	497.25505189882415	992.4955508644483	2	497.2550048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSMKENISK_	ENSG00000038358|ENST00000358933|EDC4;nc|ENSG00000038358|Q6P2E9-2|EDC4	99.01295224348159	0.040209060045561164	5				NaN	NaN	0	NaN	936	2850	3786
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3789	16.198	NaN	3281.7	30	0	2421.3	0.036			+	-1	AVKPFCRMA	9	24	360.520528489193	1078.539756067779	3	360.5204772949219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_AVKPFC(Carbamidomethyl (C))RMA_	REV__ENSG00000158077|ENST00000299481|NLRP14	15.641811463095205	0.6112419832031292	5				NaN	NaN	0	NaN	937	2850	3786
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3802	16.225	NaN	21909	30	0	5867	0.214	+			5258	ATVDKTVCK	9	77	482.75990676303206	963.5052605928641	2	482.7600402832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATVDKTVCK_	ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1670Tfs*23|1|0.29|ENSG00000174231|chr17:1659487-1659487|C/-|frameshift_variant	160.8219353732433	0.004346709298329381	5				NaN	NaN	0	NaN	947	2853	3801
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3803	16.229	NaN	1482.2	30	0	234.25	0.106			+	1516	AGAGCPVSK	9	37	395.1995942231177	788.3846355130354	2	395.19964599609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AGAGCPVSK_	REV__ENST00000244741.9_1_6:36646503-36651969:+|nuORF	37.81151784470057	0.4459294069877048	5				NaN	NaN	0	NaN	948	2853	3801
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3804	16.231	NaN	1505.1	30	0	169.99	0.035	+			21644	KPTPRSGFS	9	50	488.76355840437685	975.5125638755537	2	488.7641906738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KPTPRSGFS_	ENSG00000104731|ENST00000270583|KLHDC4;ENST00000562913.5_1_16:87744798-87760508:-|nuORF;ENST00000566349.5_1_16:87741959-87776602:-|nuORF;KLHDC4|p.R361Qfs*9|1|0.36|ENSG00000104731|chr16:87709632-87709633|-/C|frameshift_variant;KLHDC4|p.R412Gfs*28|1|0.34|ENSG00000104731|chr16:87709478-87709478|G/-|frameshift_variant;nc|ENSG00000104731|Q8TBB5-2|KLHDC4;nc|ENSG00000104731|Q8TBB5-3|KLHDC4	44.116797842482775	0.37197099687881774	5				NaN	NaN	0	NaN	949	2853	3801
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3832	16.293	NaN	5196.3	30	0	648.94	0.214	+			39272	STAQRVTYK	9	72	527.2884188470225	NaN	0	527.289306640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STAQRVTYK_	ENSG00000126226|ENST00000337344|PCID2;nc|ENSG00000126226|Q5JVF3-2|PCID2;nc|ENSG00000126226|Q5JVF3-3|PCID2;nc|ENSG00000126226|Q5JVF3-4|PCID2	83.6470233535746	0.058886874190800687	5				NaN	NaN	0	NaN	971	2859	3831
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3833	16.296	NaN	1494	30	0	336.98	0.106	+			27031	LYTVLLGYR	9	34	366.548828125	NaN	0	366.548828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LYTVLLGYR_	ENSG00000101977|ENST00000519895|MCF2;MCF2|p.R820Kfs*12|1|0.54|ENSG00000101977|chrX:139587779-139587780|-/T|frameshift_variant;nc|ENSG00000101977|P10911-2|MCF2;nc|ENSG00000101977|P10911-3|MCF2;nc|ENSG00000101977|P10911-4|MCF2;nc|ENSG00000101977|P10911-6|MCF2;nc|ENSG00000101977|P10911|MCF2	19.1035232394073	0.3723251548669699	5				NaN	NaN	0	NaN	972	2859	3831
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3834	16.298	NaN	902.3	30	0	128.33	0.036			+	-1	KIWLHCIK	8	35	549.3202514648438	NaN	0	549.3202514648438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_KIWLHC(Carbamidomethyl (C))IK_	REV__ENSG00000091181|ENST00000446632|IL5RA;REV__nc|ENSG00000091181|Q01344-5|IL5RA	30.503639358989545	1.7418937515398478	5				NaN	NaN	0	NaN	973	2859	3831
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3848	16.328	NaN	4573.7	30	0	1383.7	0.214	+			4985	ATRLWLRNG	9	35	362.8765881971566	NaN	0	362.87664794921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATRLWLRNG_	ENSG00000185033|ENST00000411539|SEMA4B;nc|ENSG00000185033|Q9NPR2-2|SEMA4B;SEMA4B|p.S797Vfs*6|1|0.32|ENSG00000185033|chr15:90228507-90228508|-/C|frameshift_variant	32.81241826257853	0.3119040447479903	5				NaN	NaN	0	NaN	984	2862	3847
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3849	16.332	NaN	1759.3	30	0	362.44	0.106			+	37323	SLDWRRLWK	9	41	420.57000732421875	NaN	0	420.57000732421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLDWRRLWK_	REV__ENST00000273047.8_1_3:19988598-19988706:+|nuORF	32.81241826257853	0.3119040447479903	5				NaN	NaN	0	NaN	985	2862	3847
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3850	16.334	NaN	983.52	30	0	436.96	0.106	+			16885	HPHHAGPGHPG	11	26	550.7604370117188	NaN	0	550.7604370117188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HPHHAGPGHPG_	ENST00000329410.3_1_16:29756111-29756192:-|nuORF	17.364965105453717	0.456735970842152	5				NaN	NaN	0	NaN	986	2862	3847
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3851	16.335	NaN	1093.2	30	0	442.15	0.106	+			32487	QVNGGTVAEK	10	35	501.7648010253906	NaN	0	501.7648010253906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QVNGGTVAEK_	ENSG00000100316|ENST00000216146|RPL3;ENST00000413027.1_1_6:31248141-31248948:+|nuORF	46.45678178249821	0.32800322091223805	5				NaN	NaN	0	NaN	987	2862	3847
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3852	16.337	NaN	2474.3	30	0	1301.4	0.106				-1	EAFCSRRILCF	11	41	467.8964975855447	1400.667663356834	3	468.23101806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_EAFCSRRILC(Carbamidomethyl (C))F_	ENST00000381192.8_1_X:2658911-2659019:+|nuORF	18.531049691330335	0.7837198200183355	5				NaN	NaN	0	NaN	988	2862	3847
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3853	16.339	NaN	2119.7	30	0	433.22	0.035				-1	GWEGPRCE	8	54	495.70847101612674	NaN	0	495.2261657714844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_GWEGPRC(Carbamidomethyl (C))E_	CRB2|p.P1084L|1|0.43|ENSG00000148204|chr9:123373782-123373782|C/T|missense_variant;ENSG00000148204|ENST00000373631|CRB2;nc|ENSG00000148204|Q5IJ48-2|CRB2;nc|ENSG00000148204|Q5IJ48-3|CRB2	37.15910966729921	1.7418937515398478	5				NaN	NaN	0	NaN	989	2862	3847
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3871	16.377	NaN	1892.9	30	0	197.96	0.142			+	31468	QKVREEGK	8	51	487.2748942314093	972.5352355296186	2	487.2749938964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QKVREEGK_	REV__ENSG00000196924|ENST00000369850|FLNA;REV__FLNA|p.A1026Lfs*20|1|0.42|ENSG00000196924|chrX:154361439-154361439|C/-|frameshift_variant;REV__FLNA|p.D535Mfs*34|1|0.31|ENSG00000196924|chrX:154365224-154365224|C/-|frameshift_variant;REV__FLNA|p.G2237Efs*109|1|0.28|ENSG00000196924|chrX:154352240-154352240|C/-|frameshift_variant;REV__FLNA|p.Q1716Sfs*23|2|0.38|ENSG00000196924|chrX:154354896-154354896|G/-|frameshift_variant;REV__FLNA|p.R2520Vfs*16|1|0.7|ENSG00000196924|chrX:154349560-154349560|G/-|frameshift_variant;REV__nc|ENSG00000196924|P21333-2|FLNA	60.97194046774394	0.49215940876911696	5				NaN	NaN	0	NaN	1004	2865	3870
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3881	16.4	NaN	8170.7	30	0	4488.2	0.214	+			23011	KVSKELVEK	9	64	353.8851755888861	1058.6336973668583	3	353.8853759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVSKELVEK_	ENSG00000125844|ENST00000377813|RRBP1;nc|ENSG00000125844|Q9P2E9-3|RRBP1;RRBP1|p.A628Gfs*69|1|0.35|ENSG00000125844|chr20:17621915-17621916|-/T|frameshift_variant	61.691277971877994	0.19951612995419254	5				NaN	NaN	0	NaN	1011	2868	3880
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3882	16.404	NaN	1815.8	30	0	204.39	0.034	+			31092	QFLLGPEL	8	53	458.7585424362756	NaN	0	458.75909423828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QFLLGPEL_	ENST00000263102.6_1_10:61552344-61552569:-|nuORF	57.81127852772723	1.7418937515398478	5				NaN	NaN	0	NaN	1012	2868	3880
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3899	16.441	NaN	33919	30	0	9791.6	0.143	+			38876	SSNSYAIKK	9	75	333.1817100171804	996.5233006517412	3	333.18182373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSNSYAIKK_	ENSG00000083845|ENST00000196551|RPS5;ENST00000599232.1_1_19:58906030-58906114:+|nuORF	109.43880257439609	0.029570636687953285	5				NaN	NaN	0	NaN	1026	2871	3898
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3912	16.47	NaN	3423.8	30	0	1411.9	0.214	+			12287	GAYQTIKAQ	9	50	327.1783416283768	978.5131954853305	3	327.17840576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GAYQTIKAQ_	tr|U7STP1|U7STP1_FUSNUP-typeCa(2+)transporterOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01417PE=4SV=1	36.446750945000026	0.4619375763483977	5				NaN	NaN	0	NaN	1036	2874	3911
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3913	16.474	NaN	2268.9	30	0	320.18	0.106			+	608	ADSGRGEGLV	10	51	480.7406331790156	959.4667134248313	2	480.74029541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ADSGRGEGLV_	REV__ENSG00000159069|ENST00000325285|FBXW5;REV__ENST00000459905.5_1_9:139835382-139837220:-|nuORF;REV__ENST00000483559.5_1_9:139835382-139837095:-|nuORF	60.11826168202944	0.36476464221954025	5				NaN	NaN	0	NaN	1037	2874	3911
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3914	16.476	NaN	1933.7	30	0	481.97	0.106			+	13160	GGSLYKAK	8	46	412.23733637024094	NaN	0	412.237060546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GGSLYKAK_	REV__tr|U7SJU5|U7SJU5_FUSNUPhosphonateimportATP-bindingproteinPhnCOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02091PE=4SV=1	35.61828744233558	1.7418937515398478	5				NaN	NaN	0	NaN	1038	2874	3911
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3915	16.477	NaN	1261.1	30	0	355.71	0.106	+			40241	STSGGCNLK	9	29	433.70483587611244	NaN	0	433.7049560546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STSGGCNLK_	ENSG00000196586|ENST00000369977|MYO6;nc|ENSG00000196586|Q9UM54-2|MYO6;nc|ENSG00000196586|Q9UM54-4|MYO6;nc|ENSG00000196586|Q9UM54-5|MYO6;nc|ENSG00000196586|Q9UM54-6|MYO6;nc|ENSG00000196586|Q9UM54|MYO6	44.116797842482775	0.2472372736944149	5				NaN	NaN	0	NaN	1039	2874	3911
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3916	16.479	NaN	1230.3	30	0	235.11	0.106			+	46031	VAWCAALP	8	39	444.22673399216086	NaN	0	444.2265930175781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_VAWC(Carbamidomethyl (C))AALP_	REV__ENST00000397887.7_1_21:46270576-46270747:-|nuORF	54.89457262308372	1.7418937515398478	5				NaN	NaN	0	NaN	1040	2874	3911
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3917	16.481	NaN	653.89	30	0	54.209	0.035			+	28944	NRSALGSHR	9	39	499.26950291334686	996.5244528934937	2	499.26922607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NRSALGSHR_	REV__FLG|p.S316L|1|0.17|ENSG00000143631|chr1:152313939-152313939|G/A|missense_variant	35.61828744233558	0.47037581924408073	5				NaN	NaN	0	NaN	1041	2874	3911
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3933	16.515	NaN	4872.1	30	0	534.7	0.141	+			51290	YSAARSAAA	9	60	434.21968337511953	866.4248138170391	2	434.2192077636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YSAARSAAA_	ENSG00000189143|ENST00000340958|CLDN4	101.25262130126117	0.03792372629710479	5				NaN	NaN	0	NaN	1054	2877	3932
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3951	16.554	NaN	2963.3	30	0	677.29	0.146	+			4785	ATNKFITKDK	10	43	389.224212873534	NaN	0	389.55841064453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATNKFITKDK_	ENSG00000106031|ENST00000649031|HOXA13	53.59686742100583	0.2828625612683223	5				NaN	NaN	0	NaN	1069	2880	3950
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3969	16.593	NaN	16543	30	0	2190.8	0.214			+	-1	IAEMVLQVHK	10	84	395.22291327682626	1182.6469104306789	3	395.2235412597656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_IAEM(Oxidation (M))VLQVHK_	REV__ENSG00000052749|ENST00000370992|RRP12;REV__ENST00000479481.5_1_10:99116853-99131081:-|nuORF;REV__nc|ENSG00000052749|Q5JTH9-2|RRP12;REV__nc|ENSG00000052749|Q5JTH9-3|RRP12	81.52500206392136	0.18316182710238588	5				NaN	NaN	0	NaN	1084	2883	3968
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3970	16.596	NaN	6417.9	30	0	2381.5	0.035	+			14061	GSIKGELRK	9	57	329.86957545866323	986.5868969761898	3	329.8699035644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSIKGELRK_	CHD1|p.E1321Kfs*22|3|0.3|ENSG00000153922|chr5:98870705-98870705|T/-|frameshift_variant;CHD1|p.E1321Rfs*17|1|0.48|ENSG00000153922|chr5:98870704-98870705|-/T|frameshift_variant;CHD1|p.V947Tfs*15|1|0.21|ENSG00000153922|chr5:98882003-98882004|CT/-|frameshift_variant;ENSG00000153922|ENST00000614616|CHD1;nc|ENSG00000153922|O14646-2|CHD1	58.78195531508484	0.22376836668196862	5				NaN	NaN	0	NaN	1085	2883	3968
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3988	16.634	NaN	3743.8	30	0	1154.3	0.214	+			22575	KTSSAFVGK	9	48	462.7613290895026	923.5081052458053	2	462.7613220214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTSSAFVGK_	ENSG00000173692|ENST00000308696|PSMD1;nc|ENSG00000173692|Q99460-2|PSMD1;PSMD1-NHEJ1|1|fusion;PSMD1|p.K849Rfs*44|1|0.38|ENSG00000173692|chr2:231165258-231165258|A/-|frameshift_variant;PSMD1|p.L603Afs*7|1|0.19|ENSG00000173692|chr2:231085100-231085101|-/T|frameshift_variant;PSMD1|p.N355Tfs*17|1|0.23|ENSG00000173692|chr2:231077150-231077150|A/-|frameshift_variant	96.0336014099291	0.047854655524928534	5				NaN	NaN	0	NaN	1100	2886	3987
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3989	16.638	NaN	556.35	30	0	61.309	0.035				-1	FAPCIKMGK	9	31	505.76150486713453	NaN	0	505.7615051269531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_FAPCIKM(Oxidation (M))GK_	TRPC6|p.S430I|1|0.42|ENSG00000137672|chr11:101488941-101488941|C/A|missense_variant	17.364965105453717	0.37820932774828947	5				NaN	NaN	0	NaN	1101	2886	3987
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4001	16.664	NaN	13365	30	0	6860.7	0.214	+			14601	GTGASGSFK	9	50	406.2007706776728	810.3869884221456	2	406.20111083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTGASGSFK_	ENSG00000124575|ENST00000244534|H1-3;ENSG00000124610|ENST00000244573|H1-1;ENSG00000168298|ENST00000304218|H1-4;ENSG00000184357|ENST00000331442|H1-5;ENSG00000187475|ENST00000338379|H1-6;ENSG00000187837|ENST00000343677|H1-2	139.97047562133406	0.010493916756945389	5				NaN	NaN	0	NaN	1110	2889	4000
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4002	16.667	NaN	3399.1	30	0	1253.3	0.033	+			44659	TTGEPATPK	9	43	451.23453727221613	900.4545216112323	2	451.2350769042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTGEPATPK_	ENSG00000005302|ENST00000312196|MSL3;MSL3|p.P440Qfs*22|1|0.32|ENSG00000005302|chrX:11772188-11772188|C/-|frameshift_variant;nc|ENSG00000005302|Q8N5Y2-2|MSL3;nc|ENSG00000005302|Q8N5Y2-3|MSL3;nc|ENSG00000005302|Q8N5Y2-4|MSL3;nc|ENSG00000005302|Q8N5Y2-5|MSL3;nc|ENSG00000005302|Q8N5Y2-6|MSL3	93.1432384553994	0.056003526918089595	5				NaN	NaN	0	NaN	1111	2889	4000
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4008	16.684	NaN	1415.5	30	0	130.02	0.143	+			20076	KEKGKISSL	9	54	495.3027884321156	988.5910239310313	2	495.3038330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEKGKISSL_	ENSG00000131558|ENST00000253861|EXOC4;ENST00000462055.5_1_7:132937857-133164897:+|nuORF;ENST00000486013.5_1_7:132937857-133314895:+|nuORF;EXOC4|p.N439Ifs*15|1|0.39|ENSG00000131558|chr7:133475456-133475456|A/-|frameshift_variant;EXOC4|p.N439Kfs*28|1|0.17|ENSG00000131558|chr7:133475455-133475456|-/A|frameshift_variant;nc|ENSG00000131558|Q96A65-2|EXOC4	90.60085204095205	0.06317133949006545	5				NaN	NaN	0	NaN	1114	2892	4007
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4031	16.739	NaN	8400.8	30	0	937.05	0.214	+			38156	SQAPKAFNK	9	71	495.771782416548	989.529011899896	2	495.7716369628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SQAPKAFNK_	ENSG00000099812|ENST00000215582|MISP	115.49404669440601	0.023927554121326553	5				NaN	NaN	0	NaN	1131	2898	4030
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4032	16.743	NaN	970	30	0	175.96	0.033	+			12944	GESSKEKK	8	30	446.740156745043	NaN	0	446.73980712890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GESSKEKK_	DDX46|p.K197Sfs*4|1|0.12|ENSG00000145833|chr5:134773834-134773834|A/-|frameshift_variant;DDX46|p.T361Rfs*7|1|0.04|ENSG00000145833|chr5:134782978-134782979|-/AAGATTAACAAAC|frameshift_variant;DDX46|p.T418Qfs*23|1|0.17|ENSG00000145833|chr5:134784448-134784448|A/-|frameshift_variant;ENSG00000145833|ENST00000452510|DDX46;nc|ENSG00000145833|Q7L014|DDX46	27.882242232435846	1.7418937515398478	5				NaN	NaN	0	NaN	1132	2898	4030
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4043	16.767	NaN	1795.4	30	0	343.54	0.214				-1	LSDCLLLSAP	10	33	363.5280456542969	NaN	0	363.5280456542969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_LSDC(Carbamidomethyl (C))LLLSAP_	ENST00000399409.7_1_14:24737997-24738150:-|nuORF	29.170058357718403	0.40439580130713204	5				NaN	NaN	0	NaN	1140	2901	4042
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4044	16.771	NaN	778.24	30	0	207.57	0.035	+			15029	GTNHQLTVK	9	39	499.27490237697845	996.5352518207569	2	499.2743835449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTNHQLTVK_	ENSG00000142197|ENST00000691173|DOP1B;nc|ENSG00000142197|Q9Y3R5-2|DOP1B	51.52775601994872	0.28504342437107444	5				NaN	NaN	0	NaN	1141	2901	4042
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4060	16.805	NaN	4601.9	30	0	785.6	0.141	+			19427	KAPVTKVAA	9	62	442.7817368529622	883.5489207727244	2	442.78167724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAPVTKVAA_	ENSG00000107438|ENST00000329399|PDLIM1;ENST00000604187.1_1_14:50517346-50518003:+|nuORF	72.87924865735499	0.12833875048249987	5				NaN	NaN	0	NaN	1154	2904	4059
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4078	16.844	NaN	3084.3	30	0	1046.4	0.214	+			22367	KTIDASVSK	9	46	474.7716043404213	947.5286557476426	2	474.7713317871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTIDASVSK_	ENSG00000171681|ENST00000261168|ATF7IP;ENST00000535179.1_1_12:14619386-14628955:+|nuORF;ENST00000537653.5_1_12:14576849-14628955:+|nuORF;nc|ENSG00000171681|Q6VMQ6-2|ATF7IP;nc|ENSG00000171681|Q6VMQ6-4|ATF7IP;nc|ENSG00000171681|Q6VMQ6-5|ATF7IP	70.39856735676683	0.13906523160059378	5				NaN	NaN	0	NaN	1169	2907	4077
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4079	16.848	NaN	1727.4	30	0	333.21	0.039			+	48206	VTANTHGLWEV	11	45	409.54364013671875	NaN	0	409.54364013671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTANTHGLWEV_	REV__ENSG00000108231|ENST00000371418|LGI1;REV__nc|ENSG00000108231|O95970-2|LGI1;REV__nc|ENSG00000108231|O95970-3|LGI1	26.69291269510374	0.4464570093767436	5				NaN	NaN	0	NaN	1170	2907	4077
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4095	16.882	NaN	12109	30	0	4268.3	0.214	+			23079	KVVDLANKK	9	53	338.8816563734707	1013.6231397206122	3	338.8818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVVDLANKK_	ENSG00000104413|ENST00000433389|ESRP1;ESRP1|p.L333Sfs*55|1|0.35|ENSG00000104413|chr8:94668009-94668009|G/-|frameshift_variant;ESRP1|p.N512Hfs*7|2|0.33|ENSG00000104413|chr8:94674383-94674384|AA/-|frameshift_variant;ESRP1|p.N512Kfs*8|1|0.48|ENSG00000104413|chr8:94674382-94674383|-/A|frameshift_variant;ESRP1|p.N512Tfs*2|2|0.36|ENSG00000104413|chr8:94674383-94674383|A/-|frameshift_variant;nc|ENSG00000104413|Q6NXG1-2|ESRP1;nc|ENSG00000104413|Q6NXG1-3|ESRP1;nc|ENSG00000104413|Q6NXG1-4|ESRP1;nc|ENSG00000104413|Q6NXG1-5|ESRP1	114.8945686534367	0.024290463251177924	5				NaN	NaN	0	NaN	1183	2910	4094
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4096	16.885	NaN	15298	30	0	3019.1	0.106	+			38259	SQNPRFYHK	9	52	392.8685729494435	1175.5838894485305	3	392.8685302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SQNPRFYHK_	ENSG00000132522|ENST00000380728|GPS2;ENST00000571697.5_1_17:7216077-7216449:-|nuORF;ENST00000573807.5_1_17:7216077-7216773:-|nuORF;ENST00000574458.1_1_17:7216077-7216212:-|nuORF	60.11826168202944	0.21262886028301267	5				NaN	NaN	0	NaN	1184	2910	4094
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4097	16.887	NaN	2303.1	30	0	650.83	0.106	+			14370	GTAEPGGSMK	10	43	467.71871765725973	933.4228823813195	2	467.71893310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTAEPGGSMK_	ENSG00000183963|ENST00000333137|SMTN;ENST00000460658.5_1_22:31484094-31491444:+|nuORF;ENST00000489337.5_1_22:31484532-31494796:+|nuORF;nc|ENSG00000183963|P53814-6|SMTN;nc|ENSG00000183963|P53814|SMTN;SMTN|p.S536Vfs*33|1|0.33|ENSG00000183963|chr22:31091813-31091813|C/-|frameshift_variant	47.95952297671804	0.47580206326914537	5				NaN	NaN	0	NaN	1185	2910	4094
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4098	16.889	NaN	2459.7	30	0	787.96	0.037	+			39694	STIKFQMKK	9	40	376.214599609375	NaN	0	376.214599609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_STIKFQM(Oxidation (M))KK_	ENSG00000198755|ENST00000322203|RPL10A;ENST00000464112.5_1_6:35436546-35438524:+|nuORF;ENST00000472730.1_1_3:61728131-61728755:-|nuORF;ENST00000478340.2_1_6:35437033-35438524:+|nuORF	47.95952297671804	0.22075498469600283	5				NaN	NaN	0	NaN	1186	2910	4094
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4116	16.927	NaN	2167.2	30	0	763.04	0.214	+			38480	SSATETINK	9	57	475.7435222827154	949.4724916322308	2	475.7433166503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSATETINK_	ENSG00000096696|ENST00000379802|DSP	82.7504851949679	0.08565546331141553	5				NaN	NaN	0	NaN	1201	2913	4115
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4117	16.931	NaN	748.37	30	0	170.01	0.106				-1	QFCKFDVI	8	39	528.7619018554688	NaN	0	528.7619018554688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_QFC(Carbamidomethyl (C))KFDVI_	ENSG00000255298|ENST00000641992|OR8G5;nc|ENSG00000255298|Q8NG78|OR8G5;OR8G5|p.N241Efs*3|1|0.03|ENSG00000255298|chr11:124265546-124265547|-/GAACCCTA|frameshift_variant	37.15910966729921	1.7418937515398478	5				NaN	NaN	0	NaN	1202	2913	4115
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4118	16.933	NaN	5238.2	30	0	2012.6	0.033	+			6356	AVTSGVATK	9	48	417.2402872584493	832.4660215836986	2	417.2403869628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVTSGVATK_	ENSG00000249992|ENST00000503771|TMEM158;nc|ENSG00000249992|Q8WZ71-2|TMEM158	82.7504851949679	0.08565546331141553	5				NaN	NaN	0	NaN	1203	2913	4115
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4133	16.965	NaN	2721.3	30	0	1130.6	0.214	+			22518	KTQEIFHSK	9	45	373.205078125	NaN	0	373.205078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTQEIFHSK_	ENSG00000108557|ENST00000353383|RAI1;nc|ENSG00000258436|Q7Z5J4-2|RAI1;nc|ENSG00000258436|Q7Z5J4-3|RAI1	63.53385203322761	0.134247007536971	5				NaN	NaN	0	NaN	1215	2916	4132
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4134	16.968	NaN	1417.9	30	0	299.17	0.036			+	51268	YRLRSELK	8	29	355.5454359847715	NaN	0	355.54547119140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YRLRSELK_	REV__ENSG00000183580|ENST00000504595|FBXL7;REV__nc|ENSG00000183580|Q9UJT9-2|FBXL7	19.359975847455235	1.7418937515398478	5				NaN	NaN	0	NaN	1216	2916	4132
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4148	16.998	NaN	2490.5	30	0	391.99	0.144	+			32943	REAVEQQKV	9	58	543.7985725838307	1085.5825922344613	2	543.7984008789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_REAVEQQKV_	ENSG00000125844|ENST00000377813|RRBP1;nc|ENSG00000125844|Q9P2E9-3|RRBP1;RRBP1|p.A628Gfs*69|1|0.35|ENSG00000125844|chr20:17621915-17621916|-/T|frameshift_variant	65.15724298150197	0.17062369902793603	5				NaN	NaN	0	NaN	1227	2919	4147
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4161	17.027	NaN	8531.2	30	0	3844.7	0.214			+	-1	TGLVMTKKQ	9	51	341.1949222270536	1020.5629372813609	3	341.1954040527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_TGLVM(Oxidation (M))TKKQ_	REV__ENSG00000148600|ENST00000623527|CDHR1;REV__nc|ENSG00000148600|Q96JP9-2|CDHR1	39.252832667884924	0.4290233611298554	5				NaN	NaN	0	NaN	1237	2922	4160
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4162	17.031	NaN	1635.4	30	0	285.55	0.106			+	-1	QYGQPCMC	8	40	522.1932892761331	NaN	0	522.1937255859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_QYGQPC(Carbamidomethyl (C))MC(Carbamidomethyl (C))_	REV__ENSG00000115380|ENST00000355426|EFEMP1;REV__nc|ENSG00000115380|Q12805-2|EFEMP1;REV__nc|ENSG00000115380|Q12805-3|EFEMP1;REV__nc|ENSG00000115380|Q12805-4|EFEMP1;REV__nc|ENSG00000115380|Q12805-5|EFEMP1	28.2542754592877	1.7418937515398478	5				NaN	NaN	0	NaN	1238	2922	4160
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4163	17.033	NaN	2682.7	30	0	424.15	0.106	+			22777	KVFDAKPSAK	10	58	545.8160417916445	1089.6175306500888	2	545.8175048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KVFDAKPSAK_	ENSG00000143889|ENST00000449105|HNRNPLL;nc|ENSG00000143889|Q8WVV9-4|HNRNPLL;nc|ENSG00000143889|Q8WVV9-5|HNRNPLL	118.23318122614258	0.029825105341188273	5				NaN	NaN	0	NaN	1239	2922	4160
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4164	17.035	NaN	910.86	30	0	203.25	0.034	+			45187	TVMTQSTAK	9	33	483.74981689453125	NaN	0	483.74981689453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TVMTQSTAK_	ENSG00000139793|ENST00000679496|MBNL2	29.170058357718403	0.3302935627494407	5				NaN	NaN	0	NaN	1240	2922	4160
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4180	17.068	NaN	2267.4	30	0	302.86	0.214			+	47077	VLIFIFPAH	9	36	352.88019777260274	NaN	0	352.8802185058594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VLIFIFPAH_	REV__ENSG00000179846|ENST00000686631|NKPD1;REV__nc|ENSG00000179846|Q17RQ9|NKPD1	29.841539824830324	0.32690339240668626	5				NaN	NaN	0	NaN	1253	2925	4179
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4181	17.072	NaN	1318.7	30	0	661.19	0.106				-1	AVVIILPRAM	10	27	366.8961181640625	NaN	0	366.8961181640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_AVVIILPRAM(Oxidation (M))_	ENSG00000125912|ENST00000246117|NCLN;nc|ENSG00000125912|Q969V3-2|NCLN	18.262085536374414	0.4201028297492154	5				NaN	NaN	0	NaN	1254	2925	4179
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4182	17.074	NaN	850.08	30	0	97.548	0.036	+			39344	STCGKCGYPAK	11	44	557.7556409916351	NaN	0	557.7568359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STCGKCGYPAK_	ENSG00000145592|ENST00000274242|RPL37;ENST00000504562.1_1_5:40832608-40835123:-|nuORF;ENST00000507642.5_1_5:40832592-40834660:-|nuORF	50.033510581677724	0.3150780456176802	5				NaN	NaN	0	NaN	1255	2925	4179
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4196	17.103	NaN	46309	30	0	30052	0.215				-1	 	0	78	494.2767964041493	986.5390398750986	2	494.27691650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1266	2928	4195
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4197	17.107	NaN	4968.8	30	0	1483.5	0.033	+			388	AASEAGRAM	9	56	432.2052952542323	862.3960375752646	2	432.2055358886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AASEAGRAM_	ENSG00000071859|ENST00000393600|FAM50A	82.24051045832904	0.08786059719216216	5				NaN	NaN	0	NaN	1267	2928	4195
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4206	17.127	NaN	2765.1	30	0	803.6	0.141	+			15088	GTQGSPITK	9	47	444.74267866666156	887.4708044001231	2	444.7429504394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTQGSPITK_	ENSG00000110237|ENST00000263674|ARHGEF17;ENST00000536481.1_1_11:73075528-73075729:+|nuORF	66.96192283764107	0.15557981141143568	5				NaN	NaN	0	NaN	1273	2931	4205
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4224	17.165	NaN	1756.2	30	0	446.64	0.144			+	21362	KMAVKNLTR	9	45	530.8189742875369	NaN	0	530.8184814453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KMAVKNLTR_	REV__COPG1|p.V308I|1|0.46|ENSG00000181789|chr3:129260383-129260383|G/A|missense_variant;REV__ENSG00000158623|ENST00000425248|COPG2;REV__ENSG00000181789|ENST00000314797|COPG1;REV__nc|ENSG00000158623|Q9UBF2-2|COPG2	42.396135135203025	0.2590952873412954	5				NaN	NaN	0	NaN	1288	2934	4223
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4250	17.225	NaN	6930.6	30	0	1533.5	0.214	+			35103	SAGDVAVQK	9	58	437.7352634607838	873.4559739883676	2	437.7352294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAGDVAVQK_	ENSG00000164574|ENST00000297107|GALNT10;ENST00000517958.1_1_5:153783698-153796529:+|nuORF;ENST00000520647.5_1_5:153755841-153792087:+|nuORF;nc|ENSG00000164574|Q86SR1-2|GALNT10;nc|ENSG00000164574|Q86SR1-4|GALNT10	141.52041321563706	0.009766778904176347	5				NaN	NaN	0	NaN	1308	2940	4249
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4251	17.228	NaN	929.8	30	0	216.96	0.106	+			14691	GTIGKKFAR	9	37	489.2982177734375	NaN	0	489.2982177734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTIGKKFAR_	ENSG00000135698|ENST00000258169|MPHOSPH6	49.536043120802724	0.20989033510253738	5				NaN	NaN	0	NaN	1309	2940	4249
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4252	17.23	NaN	1455.6	30	0	418.89	0.034	+			17467	ICLNGTPALA	10	35	486.76494665619725	NaN	0	486.7652587890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ICLNGTPALA_	ENSG00000105223|ENST00000409735|PLD3;ENST00000475983.1_1_19:40877588-40880546:+|nuORF	37.81151784470057	0.3760215235790741	5				NaN	NaN	0	NaN	1310	2940	4249
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4270	17.268	NaN	3559.7	30	0	1341.3	0.214			+	3301	ASLSMGLVPY	10	32	346.517323480616	1036.5301410420482	3	346.51727294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASLSMGLVPY_	REV__ENST00000585971.1_1_18:33069229-33077838:-|nuORF	36.446750945000026	0.5818864909973037	5				NaN	NaN	0	NaN	1325	2943	4269
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4271	17.271	NaN	1859.2	30	0	449.63	0.034			+	13558	GLSSKGTSGL	10	48	453.7482345327039	NaN	0	453.7481689453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GLSSKGTSGL_	REV__nc|ENSG00000166863|Q9UHF0-2|TAC3	56.72105179125745	0.2610545891966633	5				NaN	NaN	0	NaN	1326	2943	4269
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4285	17.301	NaN	3490.4	30	0	275.23	0.214	+			38282	SQQKVVITK	9	67	515.8165965002651	1029.61864006733	2	515.8173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SQQKVVITK_	ENSG00000007952|ENST00000372966|NOX1;ENSG00000165168|ENST00000378588|CYBB;nc|ENSG00000007952|Q9Y5S8-3|NOX1;NOX1|p.R290H|1|0.17|ENSG00000007952|chrX:100851261-100851261|C/T|missense_variant	131.115847015877	0.014647977962315902	5				NaN	NaN	0	NaN	1337	2946	4284
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4286	17.304	NaN	2759.5	30	0	862.41	0.106	+			23041	KVTDISGTK	9	51	474.7717390501011	NaN	0	474.7718200683594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVTDISGTK_	ENST00000469676.1_1_2:74362651-74373491:-|nuORF;ENST00000484655.1_1_2:74362651-74372610:-|nuORF;nc|ENSG00000163170|Q53S33-2|BOLA3	47.657333605630114	0.2228375344433429	5				NaN	NaN	0	NaN	1338	2946	4284
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4287	17.306	NaN	466.08	30	0	71.313	0.035	+			20334	KERGQAVEV	9	28	508.2806396484375	NaN	0	508.2806396484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KERGQAVEV_	ENSG00000184634|ENST00000374080|MED12;MED12|p.E1337Kfs*8|1|0.26|ENSG00000184634|chrX:71130173-71130173|G/-|frameshift_variant;nc|ENSG00000184634|Q93074-2|MED12;nc|ENSG00000184634|Q93074-3|MED12	15.641811463095205	0.38404136392510424	5				NaN	NaN	0	NaN	1339	2946	4284
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4299	17.332	NaN	5249.1	30	0	1050.1	0.214	+			22099	KSMNANTITK	10	64	554.2953549856873	1106.5761570381744	2	554.2964477539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSMNANTITK_	ENSG00000175467|ENST00000312397|SART1	158.47086538638308	0.006991472700766511	5				NaN	NaN	0	NaN	1348	2949	4298
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4300	17.336	NaN	1343.3	30	0	111.62	0.106			+	41148	SVIYQNGPSI	10	61	539.2818990952674	NaN	0	539.2813720703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVIYQNGPSI_	REV__ENSG00000166596|ENST00000352665|CFAP52;REV__ENST00000576630.5_1_17:9487588-9546512:+|nuORF;REV__nc|ENSG00000166596|Q8N1V2-2|CFAP52;REV__nc|ENSG00000166596|Q8N1V2-3|CFAP52	36.446750945000026	0.3805027428805705	5				NaN	NaN	0	NaN	1349	2949	4298
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4301	17.338	NaN	1378.2	30	0	327.11	0.038	+			12244	GASNLKISRMD	11	34	397.87488013580406	NaN	0	397.54010009765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GASNLKISRMD_	ENSG00000077150|ENST00000661543|NFKB2;ENST00000467116.5_1_10:104155716-104158713:+|nuORF;nc|ENSG00000077150|Q00653-3|NFKB2;nc|ENSG00000077150|Q00653-4|NFKB2;NFKB2|p.Y294Ifs*4|1|0.29|ENSG00000077150|chr10:102398406-102398406|C/-|frameshift_variant	30.568863376406313	0.42918353898720446	5				NaN	NaN	0	NaN	1350	2949	4298
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4317	17.371	NaN	4263.5	30	0	625.59	0.214				-1	VPMLAGNRE	9	58	501.75590092755044	1001.4972489219009	2	501.7556457519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_VPM(Oxidation (M))LAGNRE_	ENSG00000205108|ENST00000378788|FAM205A	49.44154591367651	0.3095138337212152	5				NaN	NaN	0	NaN	1363	2952	4316
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4318	17.375	NaN	5848.5	30	0	1905.2	0.106	+			4261	ATGESIAVKK	10	44	335.19769418578136	NaN	0	335.1976318359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATGESIAVKK_	DCLRE1C|p.R685Efs*6|1|0.37|ENSG00000152457|chr10:14908434-14908434|T/-|frameshift_variant;ENSG00000152457|ENST00000378278|DCLRE1C;nc|ENSG00000152457|Q96SD1-2|DCLRE1C;nc|ENSG00000152457|Q96SD1-3|DCLRE1C	54.722347961057174	0.27574710963839943	5				NaN	NaN	0	NaN	1364	2952	4316
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4319	17.377	NaN	1788.8	30	0	539.36	0.106			+	22498	KTNVVDKK	8	52	466.2819083333673	930.5492637335346	2	466.77972412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KTNVVDKK_	REV__ENSG00000163815|ENST00000296130|CLEC3B	45.97224482568171	0.6192535143389125	5				NaN	NaN	0	NaN	1365	2952	4316
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4320	17.379	NaN	2207.9	30	0	299.43	0.106	+			16380	HENESVYKA	9	63	538.7534808608724	1075.4924087885447	2	538.7540283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HENESVYKA_	ENSG00000182481|ENST00000330459|KPNA2;ENST00000578492.5_1_17:62746826-62750158:-|nuORF	85.86182877749512	0.07653218437724067	5				NaN	NaN	0	NaN	1366	2952	4316
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4321	17.38	NaN	471.58	30	0	182.91	0.035	+			20189	KEKYIIIE	8	13	518.3086547851562	NaN	0	518.3086547851562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEKYIIIE_	tr|U7T0A5|U7T0A5_FUSNUDNApolymeraseIIIPolC-typeOS=FusobacteriumnucleatumCTI-5OX=1316586GN=polCPE=3SV=1	7.193352174278301	1.7418937515398478	5				NaN	NaN	0	NaN	1367	2952	4316
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4335	17.41	NaN	6596.4	30	0	2339.1	0.214	+			4743	ATMPKKGILKK	11	65	405.5929533998981	1213.7570307998942	3	405.92681884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATMPKKGILKK_	ENSG00000074590|ENST00000261402|NUAK1;NUAK1|p.P507Rfs*6|1|0.5|ENSG00000074590|chr12:106067268-106067268|G/-|frameshift_variant	48.601550744091256	0.44024757269956427	5				NaN	NaN	0	NaN	1378	2955	4334
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4336	17.413	NaN	4998.2	30	0	952.29	0.039	+			44617	TTEGRNALIHK	11	50	413.8984918151355	1238.6736460456066	3	413.8985900878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTEGRNALIHK_	DHX9|p.L1065Cfs*20|1|0.41|ENSG00000135829|chr1:182883563-182883563|C/-|frameshift_variant;ENSG00000135829|ENST00000367549|DHX9;ENST00000485081.5_1_1:182847108-182856566:+|nuORF	25.57405402267927	0.7215402271931856	5				NaN	NaN	0	NaN	1379	2955	4334
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4348	17.439	NaN	9906.9	30	0	2916.1	0.214	+			14216	GSSKIAIQK	9	67	466.2819083333673	930.5492637335346	2	466.2822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSSKIAIQK_	DNAH14|p.I2559Nfs*2|1|0.39|ENSG00000185842|chr1:225337448-225337449|-/A|frameshift_variant;DNAH14|p.K396Rfs*4|1|0.25|ENSG00000185842|chr1:225023636-225023637|AA/-|frameshift_variant;DNAH14|p.K466Rfs*42|2|0.29|ENSG00000185842|chr1:225023841-225023841|A/-|frameshift_variant;DNAH14|p.T2021Hfs*9|1|0.38|ENSG00000185842|chr1:225289906-225289906|A/-|frameshift_variant;DNAH14|p.V536Yfs*11|1|0.03|ENSG00000185842|chr1:225042893-225042894|-/ATAC|frameshift_variant;ENSG00000185842|ENST00000682510|DNAH14;nc|ENSG00000185842|Q0VDD8-2|DNAH14;nc|ENSG00000185842|Q0VDD8-3|DNAH14;nc|ENSG00000185842|Q0VDD8-4|DNAH14;nc|ENSG00000185842|Q0VDD8|DNAH14	124.08010499294276	0.018729767491916592	5				NaN	NaN	0	NaN	1388	2958	4347
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4349	17.443	NaN	2294.5	30	0	521.45	0.035	+			22339	KTGEVLDTK	9	46	495.7771978224424	989.5398427116849	2	495.7777099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTGEVLDTK_	ENSG00000196937|ENST00000359943|FAM3C	96.0336014099291	0.047854655524928534	5				NaN	NaN	0	NaN	1389	2958	4347
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4361	17.468	NaN	8392.6	30	0	2126.2	0.142			+	22276	KTCGILCCK	9	57	484.7396385014302	967.4647240696604	2	484.7397766113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTCGILCCK_	REV__ENSG00000107018|ENST00000223862|RLN1;REV__ENST00000487557.2_1_9:5335253-5339295:-|nuORF	58.78195531508484	0.22376836668196862	5				NaN	NaN	0	NaN	1398	2961	4360
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4375	17.499	NaN	1436.6	30	0	187.32	0.214	+			34457	RTYSGPMNK	9	56	527.2609268819411	1052.5073008306822	2	527.2615966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTYSGPMNK_	ENSG00000124429|ENST00000262753|POF1B;nc|ENSG00000124429|Q8WVV4-1|POF1B;nc|ENSG00000124429|Q8WVV4-3|POF1B;POF1B|p.T130Lfs*12|1|0.14|ENSG00000124429|chrX:85359600-85359601|-/AG|frameshift_variant	65.46538089061403	0.16805504838372562	5				NaN	NaN	0	NaN	1409	2964	4374
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4376	17.503	NaN	1318.7	30	0	456.83	0.034	+			6323	AVTDQTVSK	9	34	474.7536744934755	947.492796053751	2	474.75341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVTDQTVSK_	COIL|p.N162Tfs*47|1|0.22|ENSG00000121058|chr17:56950757-56950757|T/-|frameshift_variant;ENSG00000121058|ENST00000240316|COIL	66.96192283764107	0.15557981141143568	5				NaN	NaN	0	NaN	1410	2964	4374
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4390	17.532	NaN	3068	30	0	968.56	0.144	+			49179	VVMRDPNTK	9	42	530.2837601834584	1058.5529674337167	2	530.2857055664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVMRDPNTK_	chr12:54282662-54282800|482|460.96|0.0|25.46|+|ENST00000677249|HNRNPA1,HNRNPA1;ENSG00000135486|ENST00000340913|HNRNPA1;ENSG00000139675|ENST00000357495|HNRNPA1L2;ENSG00000224578|ENST00000565308|HNRNPA1L3;ENST00000441603.1_1_11:5593122-5593311:-|nuORF;ENST00000452488.1_1_2:41383770-41384067:+|nuORF;ENST00000457695.2_1_X:100110922-100111255:-|nuORF;ENST00000575692.1_1_17:2210089-2210875:+|nuORF;nc|ENSG00000135486|P09651-2|HNRNPA1;nc|ENSG00000135486|P09651-3|HNRNPA1	43.650786325866115	0.37743712540499297	5				NaN	NaN	0	NaN	1421	2967	4389
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4406	17.567	NaN	58568	30	0	15118	0.214	+			22110	KSNISVFTPPD	11	78	402.21204019209046	1203.6142911764714	3	402.2120666503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSNISVFTPPD_	ENSG00000139304|ENST00000644991|PTPRQ;nc|ENSG00000139304|Q9UMZ3|PTPRQ;PTPRQ|p.K1365Rfs*5|1|0.42|ENSG00000139304|chr12:80549539-80549539|A/-|frameshift_variant;PTPRQ|p.N2031Kfs*10|1|0.46|ENSG00000139304|chr12:80652805-80652806|-/A|frameshift_variant;PTPRQ|p.Q1869Afs*5|1|0.38|ENSG00000139304|chr12:80620361-80620362|-/A|frameshift_variant;PTPRQ|p.Q791Kfs*18|1|0.3|ENSG00000139304|chr12:80506122-80506122|C/-|frameshift_variant;PTPRQ|p.Y1402Lfs*5|1|0.3|ENSG00000139304|chr12:80549654-80549654|A/-|frameshift_variant	52.167168403610894	0.39337392184041037	5				NaN	NaN	0	NaN	1434	2970	4405
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4407	17.57	NaN	833.71	30	0	201.92	0.033			+	48092	VSTEKTKG	8	25	425.23729100942967	848.4600290856594	2	425.73870849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSTEKTKG_	REV__ENSG00000160710|ENST00000368474|ADAR;REV__nc|ENSG00000160710|P55265-2|ADAR;REV__nc|ENSG00000160710|P55265-3|ADAR;REV__nc|ENSG00000160710|P55265-4|ADAR;REV__nc|ENSG00000160710|P55265-5|ADAR	34.172542307311794	0.6954784234644539	5				NaN	NaN	0	NaN	1435	2970	4405
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4419	17.596	NaN	12581	30	0	6558	0.214	+			49180	VVMRDPNTK	9	43	353.8584197265367	1058.5534297798101	3	353.8586120605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVMRDPNTK_	chr12:54282662-54282800|482|460.96|0.0|25.46|+|ENST00000677249|HNRNPA1,HNRNPA1;ENSG00000135486|ENST00000340913|HNRNPA1;ENSG00000139675|ENST00000357495|HNRNPA1L2;ENSG00000224578|ENST00000565308|HNRNPA1L3;ENST00000441603.1_1_11:5593122-5593311:-|nuORF;ENST00000452488.1_1_2:41383770-41384067:+|nuORF;ENST00000457695.2_1_X:100110922-100111255:-|nuORF;ENST00000575692.1_1_17:2210089-2210875:+|nuORF;nc|ENSG00000135486|P09651-2|HNRNPA1;nc|ENSG00000135486|P09651-3|HNRNPA1	47.95952297671804	0.32689736945648856	5				NaN	NaN	0	NaN	1444	2973	4418
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4420	17.599	NaN	6107.6	30	0	1501.7	0.038	+			22588	KTSTVPPSLRK	11	48	405.2467748130892	1212.7184950394676	3	405.5813293457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTSTVPPSLRK_	ENSG00000213676|ENST00000375203|ATF6B;nc|ENSG00000213676|Q99941-2|ATF6B	37.59989570853033	0.5907838038483115	5				NaN	NaN	0	NaN	1445	2973	4418
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4437	17.634	NaN	3960.5	30	0	693.38	0.214	+			30841	QEFWADLNAMN	11	51	446.86625248529924	NaN	0	446.5321350097656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QEFWADLNAMN_	ENSG00000163659|ENST00000295924|TIPARP;TIPARP|p.I342Tfs*25|1|0.42|ENSG00000163659|chr3:156694125-156694128|TATT/-|frameshift_variant	63.42647028704847	0.19993816877639167	5				NaN	NaN	0	NaN	1459	2976	4436
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4438	17.638	NaN	2448.6	30	0	592.66	0.106	+			11107	FFKQKQKK	8	35	361.22077412489045	NaN	0	361.220703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FFKQKQKK_	ENST00000334512.9_1_10:81074272-81074494:+|nuORF	16.473147378115264	1.7418937515398478	5				NaN	NaN	0	NaN	1460	2976	4436
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4439	17.64	NaN	717.89	30	0	104.17	0.106	+			29660	PGLRAAAG	8	26	356.7085465683277	NaN	0	356.70855712890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PGLRAAAG_	ENST00000332438.4_1_17:40831559-40832345:-|nuORF	44.53106598305862	1.7418937515398478	5				NaN	NaN	0	NaN	1461	2976	4436
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4440	17.642	NaN	8934.9	30	0	3631.3	0.106	+			23151	KVYDKAINR	9	62	369.5486855223286	1105.6242271671858	3	369.8823547363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KVYDKAINR_	ENSG00000164190|ENST00000282516|NIPBL;ENST00000514335.1_1_5:37051847-37064632:+|nuORF;nc|ENSG00000164190|Q6KC79-2|NIPBL;NIPBL|p.I2776Lfs*3|1|0.17|ENSG00000164190|chr5:37064797-37064797|A/-|frameshift_variant	40.05817265558897	0.419577045485086	5				NaN	NaN	0	NaN	1462	2976	4436
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4441	17.643	NaN	1575.9	30	0	432.09	0.106			+	6966	CPRIGSTQ	8	38	431.21577663226856	860.4170003313371	2	431.7177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_CPRIGSTQ_	REV__ENST00000562727.1_3_16:68299421-68308679:+|nuORF;REV__ENST00000564708.1_3_16:68298487-68308679:+|nuORF;REV__ENST00000566834.5_2_16:68298472-68307791:+|nuORF;REV__ENST00000568088.5_3_16:68298472-68307791:+|nuORF	27.882242232435846	0.7440473649773525	5				NaN	NaN	0	NaN	1463	2976	4436
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4442	17.645	NaN	611.28	30	0	95.792	0.034	+			20699	KGQENLKM	8	35	474.2527246357229	NaN	0	474.25299072265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KGQENLKM_	STRN4|p.T112M|1|0.18|ENSG00000090372|chr19:46738836-46738836|G/A|missense_variant	44.116797842482775	1.7418937515398478	5				NaN	NaN	0	NaN	1464	2976	4436
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4460	17.683	NaN	4417.5	30	0	510.39	0.214	+			27968	MVLIPGYMA	9	58	497.7569050086213	993.4992570840426	2	497.7569274902344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MVLIPGYMA_	ENSG00000157103|ENST00000287766|SLC6A1	65.80317337860623	0.1652391959156183	5				NaN	NaN	0	NaN	1479	2979	4459
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4461	17.686	NaN	14135	30	0	6029.8	0.106	+			22148	KSQTLLGK	8	67	437.77124562917163	873.5279383251433	2	437.7713623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KSQTLLGK_	ENSG00000177169|ENST00000321867|ULK1;ULK1|p.G873Afs*18|1|0.22|ENSG00000177169|chr12:131919313-131919313|G/-|frameshift_variant;ULK1|p.H274Ifs*109|2|0.29|ENSG00000177169|chr12:131910259-131910259|T/-|frameshift_variant;ULK1|p.S638Afs*9|1|0.32|ENSG00000177169|chr12:131916426-131916426|C/-|frameshift_variant;ULK1|p.T575Rfs*72|1|0.43|ENSG00000177169|chr12:131915998-131915998|C/-|frameshift_variant	139.97047562133406	0.25797680915057813	5				NaN	NaN	0	NaN	1480	2979	4459
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4462	17.688	NaN	2451.7	30	0	463.93	0.106			+	13392	GLEAKHGL	8	52	412.7350158691406	NaN	0	412.7350158691406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GLEAKHGL_	REV__ATP8B2|p.K587Efs*10|1|0.31|ENSG00000143515|chr1:154343465-154343466|-/G|frameshift_variant;REV__ENSG00000143515|ENST00000368489|ATP8B2;REV__nc|ENSG00000143515|P98198-3|ATP8B2;REV__nc|ENSG00000143515|P98198|ATP8B2	47.91560031466742	1.7418937515398478	5				NaN	NaN	0	NaN	1481	2979	4459
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4463	17.69	NaN	3968	30	0	1832.8	0.106	+			14231	GSSSASIVK	9	31	418.22969716091717	834.4448413886344	2	418.229736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GSSSASIVK_	DSG2|p.I845*|1|0.27|ENSG00000046604|chr18:31545914-31545914|A/-|frameshift_variant;ENSG00000046604|ENST00000261590|DSG2	39.252832667884924	0.4290233611298554	5				NaN	NaN	0	NaN	1482	2979	4459
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4464	17.692	NaN	3263.6	30	0	620.29	0.106	+			22310	KTETPIVSK	9	63	501.79526056652804	1001.5759681998561	2	501.7951354980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KTETPIVSK_	ENSG00000124164|ENST00000475243|VAPB;ENST00000463370.5_1_20:57007450-57019288:+|nuORF;ENST00000476395.1_1_20:57015848-57019288:+|nuORF	120.30596017624542	0.02101454110788768	5				NaN	NaN	0	NaN	1483	2979	4459
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4465	17.694	NaN	2591.4	30	0	633.25	0.034	+			40019	STMSTSCAR	9	48	472.20171615145836	942.3888793697167	2	472.2021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STMSTSCAR_	ENST00000282388.3_2_2:43452860-43453537:-|nuORF	79.71258880314673	0.09879134589249085	5				NaN	NaN	0	NaN	1484	2979	4459
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4466	17.694	NaN	155.3	30	0	20.837	0.142			+	26868	LWDRRKRK	8	14	579.3541259765625	NaN	0	579.3541259765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LWDRRKRK_	REV__ENSG00000137177|ENST00000259711|KIF13A;REV__KIF13A|p.K775Nfs*30|1|0.35|ENSG00000137177|chr6:17804490-17804490|T/-|frameshift_variant;REV__KIF13A|p.V1116Sfs*23|1|0.39|ENSG00000137177|chr6:17787792-17787792|T/-|frameshift_variant;REV__KIF13A|p.V1116Sfs*4|2|0.23|ENSG00000137177|chr6:17787791-17787792|-/T|frameshift_variant;REV__nc|ENSG00000137177|Q9H1H9-2|KIF13A;REV__nc|ENSG00000137177|Q9H1H9-3|KIF13A;REV__nc|ENSG00000137177|Q9H1H9-4|KIF13A	16.473147378115264	1.7418937515398478	5				NaN	NaN	0	NaN	1485	2979	4459
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4484	17.734	NaN	3068.6	30	0	1051.9	0.214	+			22585	KTSTVFSSK	9	49	492.7711989905785	983.527845047957	2	492.7713623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTSTVFSSK_	nc|ENSG00000196275|Q86UP8-4|GTF2IRD2	48.601550744091256	0.3193666407755445	5				NaN	NaN	0	NaN	1500	2982	4483
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4485	17.737	NaN	10276	30	0	1026.5	0.106	+			6861	CKSNWRGGWDW	11	62	465.53937043259526	1393.5962818979858	3	465.5391540527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_CKSNWRGGWDW_	ENSG00000183560|ENST00000687084|IZUMO1R;nc|ENSG00000183560|A6ND01-2|IZUMO1R	70.8162118820467	0.22893521292419713	5				NaN	NaN	0	NaN	1501	2982	4483
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4486	17.739	NaN	23175	30	0	5421.4	0.106	+			19422	KAPSAARSL	9	66	450.7663709818162	899.5181890304324	2	450.76617431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KAPSAARSL_	ENSG00000083937|ENST00000263780|CHMP2B;ENST00000466696.1_1_3:87302513-87302969:+|nuORF;nc|ENSG00000083937|Q9UQN3-2|CHMP2B	79.71258880314673	0.09879134589249085	5				NaN	NaN	0	NaN	1502	2982	4483
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4487	17.741	NaN	3041.6	30	0	1715.8	0.036			+	32812	RAVNEHEVQ	9	43	541.2731387602295	1080.5317245872589	2	541.274658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RAVNEHEVQ_	REV__ENST00000426627.1_1_13:88543904-88544189:-|nuORF	32.81241826257853	0.4965981579233955	5				NaN	NaN	0	NaN	1503	2982	4483
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4505	17.779	NaN	4462.6	30	0	1822.3	0.214			+	3242	ASLEHVGG	8	31	385.1947937011719	NaN	0	385.1947937011719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASLEHVGG_	REV__BAZ1A|p.L1455*|1|0.27|ENSG00000198604|chr14:34758726-34758726|A/-|frameshift_variant;REV__ENSG00000198604|ENST00000360310|BAZ1A;REV__ENST00000557739.1_1_14:35227840-35228035:-|nuORF;REV__nc|ENSG00000198604|Q9NRL2-2|BAZ1A	37.028477286268924	1.7418937515398478	5				NaN	NaN	0	NaN	1518	2985	4504
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4506	17.782	NaN	3591.8	30	0	878.05	0.106	+			40303	STSSSSPLR	9	50	461.23550183550356	920.4564507378071	2	461.2347106933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STSSSSPLR_	ENST00000223023.4_1_7:123388889-123389093:-|nuORF	85.16082228582465	0.07850854922700509	5				NaN	NaN	0	NaN	1519	2985	4504
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4507	17.784	NaN	582.5	30	0	91.158	0.035	+			16136	HEAEGHIVT	9	31	496.7435302734375	NaN	0	496.7435302734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HEAEGHIVT_	ENSG00000100028|ENST00000215829|SNRPD3;ENST00000468770.1_1_22:24953642-24953888:+|nuORF;nc|ENSG00000286070|P62318-2|SNRPD3	16.473147378115264	0.38122769658151995	5				NaN	NaN	0	NaN	1520	2985	4504
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4525	17.822	NaN	5035.4	30	0	1162	0.144				-1	 	0	66	533.2693705894249	532.2620941228248	1	533.2709350585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1535	2988	4524
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4543	17.86	NaN	7208.8	30	0	1863.9	0.214	+			48902	VVDNGSGMCK	10	69	533.7356536516261	1065.456754370052	2	533.7366333007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_VVDNGSGMC(Carbamidomethyl (C))K_	ACTBL2|p.R29Gfs*7|1|0.37|ENSG00000169067|chr5:57482623-57482623|G/-|frameshift_variant;ENSG00000075624|ENST00000646664|ACTB;ENSG00000169067|ENST00000423391|ACTBL2;ENST00000418351.1_1_15:44282253-44282364:-|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000477812.1_1_7:5569027-5569288:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF	120.27252224102466	0.026944837168485097	5				NaN	NaN	0	NaN	1550	2991	4542
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4544	17.864	NaN	2553	30	0	210.25	0.106			+	15768	GVSVNVRSL	9	64	465.7720256504102	929.5294983676205	2	465.7718200683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GVSVNVRSL_	REV__ENSG00000163093|ENST00000295240|BBS5;REV__nc|ENSG00000163093|Q8N3I7-2|BBS5	42.396135135203025	0.392153681582562	5				NaN	NaN	0	NaN	1551	2991	4542
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4545	17.866	NaN	2826.8	30	0	926.12	0.033	+			4279	ATGGMANVK	9	42	424.7184044095329	847.4222558858659	2	424.7180480957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATGGMANVK_	ENSG00000136936|ENST00000375128|XPA;XPA|p.A65T|1|0.24|ENSG00000136936|chr9:97693739-97693739|C/T|missense_variant	84.9155231211612	0.07920012719736333	5				NaN	NaN	0	NaN	1552	2991	4542
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4562	17.901	NaN	6729.2	30	0	2949.8	0.214	+			15270	GTTKVDALK	9	61	466.7746194518479	931.5346859704958	2	466.77435302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTTKVDALK_	ENSG00000115204|ENST00000380044|MPV17;MPV17|p.G95Afs*7|1|0.1|ENSG00000115204|chr2:27312585-27312585|C/-|frameshift_variant	74.1650062923329	0.12277912660386392	5				NaN	NaN	0	NaN	1566	2994	4561
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4563	17.904	NaN	4642.6	30	0	1434.7	0.106			+	4867	ATPVPKSEPA	10	32	332.8503112792969	NaN	0	332.8503112792969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATPVPKSEPA_	REV__ABI3BP|p.K701Sfs*41|1|0.1|ENSG00000154175|chr3:100780137-100780137|T/-|frameshift_variant;REV__ENSG00000154175|ENST00000471714|ABI3BP	28.081489160057373	0.40797012399963245	5				NaN	NaN	0	NaN	1567	2994	4561
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4564	17.906	NaN	6922.4	30	0	1596.5	0.106	+			32755	RAQDLPLKK	9	54	356.8882893879889	1067.6430387641667	3	356.8891906738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RAQDLPLKK_	ENSG00000139641|ENST00000394048|ESYT1	45.97224482568171	0.3502073465782774	5				NaN	NaN	0	NaN	1568	2994	4561
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4565	17.908	NaN	3048.5	30	0	1383.8	0.106	+			14247	GSSSVAAMK	9	34	419.2104611011258	836.4063692690517	2	419.2103576660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GSSSVAAMK_	ENSG00000174021|ENST00000370645|GNG5;GNG5-NMI|1|fusion	44.377184641726394	0.36891676396732553	5				NaN	NaN	0	NaN	1569	2994	4561
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4566	17.91	NaN	3997.5	30	0	1931.2	0.106	+			39281	STARLWDHKK	10	50	414.5630858602499	1240.6674281809496	3	414.56341552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STARLWDHKK_	ENST00000529974.1_1_11:88068229-88070878:-|nuORF	47.227680397652996	0.4825456260682108	5				NaN	NaN	0	NaN	1570	2994	4561
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4567	17.912	NaN	1122.3	30	0	381.3	0.035				-1	ETKMVIKK	8	39	496.7948913574219	NaN	0	496.7948913574219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_ETKM(Oxidation (M))VIKK_	ENSG00000110436|ENST00000278379|SLC1A2;nc|ENSG00000110436|P43004-2|SLC1A2;nc|ENSG00000110436|P43004-3|SLC1A2;SLC1A2|p.I412Mfs*78|1|0.06|ENSG00000110436|chr11:35286807-35286808|-/GGTGGAAGAC|frameshift_variant	38.80614096846853	1.7418937515398478	5				NaN	NaN	0	NaN	1571	2994	4561
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4568	17.912	NaN	8868.2	30	0	1458.3	0.145				-1	CNGETVVYWEV	11	70	452.53592939617545	1354.5859587887264	3	452.5362243652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_C(Carbamidomethyl (C))NGETVVYWEV_	ENSG00000141179|ENST00000268896|PCTP;nc|ENSG00000141179|Q9UKL6-2|PCTP	27.64392233501311	0.6998289966465058	5				NaN	NaN	0	NaN	1572	2994	4561
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4586	17.952	NaN	5733.7	30	0	1044.9	0.214	+			21160	KKVHSTIQK	9	63	534.8294641161988	1067.6443752991975	2	534.8310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KKVHSTIQK_	ENSG00000068784|ENST00000263736|SRBD1;SRBD1|p.T783Ifs*12|1|0.05|ENSG00000068784|chr2:45413279-45413280|-/CCAAA|frameshift_variant	93.1432384553994	0.056003526918089595	5				NaN	NaN	0	NaN	1587	2997	4585
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4587	17.955	NaN	3577.3	30	0	1172.5	0.106			+	4835	ATPHWSLIGV	10	39	360.86489925398865	NaN	0	360.86505126953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATPHWSLIGV_	REV__CORO6|p.R133C|1|0.18|ENSG00000167549|chr17:29619114-29619114|G/A|missense_variant;REV__ENSG00000167549|ENST00000388767|CORO6;REV__ENST00000459686.5_1_17:27945497-27949916:-|nuORF;REV__nc|ENSG00000167549|Q6QEF8|CORO6	23.52269567125451	0.42010282974921537	5				NaN	NaN	0	NaN	1588	2997	4585
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4588	17.957	NaN	624.42	30	0	141.81	0.106	+			21512	KNNPCYSRRDC	11	15	678.3025512695312	NaN	0	678.3025512695312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KNNPCYSRRDC_	tr|U7SH97|U7SH97_FUSNUUncharacterizedprotein(Fragment)OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02207PE=4SV=1	12.811709888998246	0.456735970842152	5				NaN	NaN	0	NaN	1589	2997	4585
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4589	17.959	NaN	2327.8	30	0	675.11	0.036				-1	 	0	42	537.2913042115832	1072.5680554899664	2	537.7953491210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1590	2997	4585
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4607	17.997	NaN	15119	30	0	3692.7	0.214	+			38507	SSAVTSVAK	9	67	425.2373483258411	848.4601437184822	2	425.2374572753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSAVTSVAK_	ENSG00000165949|ENST00000612813|IFI27;nc|ENSG00000165949|P40305-1|IFI27	150.36159442982594	0.006784847064083231	5				NaN	NaN	0	NaN	1605	3000	4606
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4608	18	NaN	49147	30	0	18965	0.106	+			4073	ATDKSFVEK	9	90	512.7690539858495	1023.523555038499	2	512.769287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATDKSFVEK_	ENSG00000100345|ENST00000216181|MYH9;ENSG00000105357|ENST00000642316|MYH14;ENSG00000133392|ENST00000300036|MYH11;MYH14|p.L1950Sfs*14|1|0.34|ENSG00000105357|chr19:50309646-50309646|C/-|frameshift_variant;MYH14|p.M997*|1|0.19|ENSG00000105357|chr19:50271483-50271483|A/-|frameshift_variant;MYH14|p.R929Gfs*44|1|0.38|ENSG00000105357|chr19:50268237-50268237|G/-|frameshift_variant;MYH9|p.I784*|1|0.07|ENSG00000100345|chr22:36304036-36304036|G/-|frameshift_variant;nc|ENSG00000100345|P35579-2|MYH9;nc|ENSG00000105357|Q7Z406-4|MYH14;nc|ENSG00000105357|Q7Z406-5|MYH14;nc|ENSG00000105357|Q7Z406-6|MYH14;nc|ENSG00000105357|Q7Z406|MYH14;nc|ENSG00000133392|P35749-2|MYH11;nc|ENSG00000133392|P35749-3|MYH11;nc|ENSG00000133392|P35749-4|MYH11	209.21039097705471	5.5375157516244266E-08	5				NaN	NaN	0	NaN	1606	3000	4606
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4609	18.002	NaN	2501.9	30	0	394.23	0.106			+	38563	SSFGKDGTK	9	54	463.7323501986897	925.4501474641794	2	463.7324523925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSFGKDGTK_	REV__ENSG00000139428|ENST00000545712|MMAB;REV__ENST00000536760.1_1_12:110002806-110011285:-|nuORF	68.84614121027924	0.14577793175421136	5				NaN	NaN	0	NaN	1607	3000	4606
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4610	18.004	NaN	2424	30	0	1386.6	0.106			+	47913	VSLRVKTHEQ	10	27	399.5631750415299	1195.6676957247898	3	399.56304931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSLRVKTHEQ_	REV__ENSG00000103222|ENST00000399410|ABCC1;REV__nc|ENSG00000103222|P33527-2|ABCC1;REV__nc|ENSG00000103222|P33527-3|ABCC1;REV__nc|ENSG00000103222|P33527-4|ABCC1;REV__nc|ENSG00000103222|P33527-5|ABCC1;REV__nc|ENSG00000103222|P33527-6|ABCC1;REV__nc|ENSG00000103222|P33527-7|ABCC1;REV__nc|ENSG00000103222|P33527-8|ABCC1;REV__nc|ENSG00000103222|P33527-9|ABCC1	16.006774744331256	0.7351120747673535	5				NaN	NaN	0	NaN	1608	3000	4606
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4611	18.006	NaN	951.73	30	0	342.86	0.106	+			3893	ATAQFKINKK	10	29	383.5644523493814	NaN	0	383.5645751953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATAQFKINKK_	ENSG00000143228|ENST00000271452|NUF2;NUF2|p.I401Nfs*2|1|0.3|ENSG00000143228|chr1:163349015-163349016|-/A|frameshift_variant	16.006774744331256	0.4201028297492154	5				NaN	NaN	0	NaN	1609	3000	4606
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4612	18.008	NaN	1324.4	30	0	376.58	0.036			+	-1	LACLGLPFY	9	26	351.8524728452551	1052.5355891359652	3	351.85272216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_LAC(Carbamidomethyl (C))LGLPFY_	REV__ENSG00000240720|ENST00000458448|LRRD1	37.15910966729921	0.4535818937225704	5				NaN	NaN	0	NaN	1610	3000	4606
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4630	18.044	NaN	21240	30	0	11489	0.214	+			49193	VVMRDPQTK	9	52	358.53025770605956	1072.5689437183787	3	358.5306701660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVMRDPQTK_	ENSG00000170144|ENST00000392524|HNRNPA3;ENST00000437410.2_1_1:54441353-54441674:-|nuORF;ENST00000472163.1_1_3:75263799-75264780:+|nuORF;HNRNPA3|p.K200Rfs*147|1|0.13|ENSG00000170144|chr2:177216544-177216544|A/-|frameshift_variant;HNRNPA3|p.Y267Lfs*2|1|0.62|ENSG00000170144|chr2:177216918-177216919|-/T|frameshift_variant;nc|ENSG00000170144|P51991-2|HNRNPA3	40.05817265558897	0.419577045485086	5				NaN	NaN	0	NaN	1625	3003	4629
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4631	18.047	NaN	2556.4	30	0	1885.1	0.106			+	7573	DIKKRLSNI	9	26	362.8927307128906	NaN	0	362.8927307128906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DIKKRLSNI_	REV__tr|U7SRH7|U7SRH7_FUSNUTwo-componentsystem,OmpRfamily,responseregulatorArlROS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01664PE=4SV=1	15.641811463095205	0.38404136392510424	5				NaN	NaN	0	NaN	1626	3003	4629
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4632	18.05	NaN	9206.2	30	0	2560.7	0.106	+			35788	SEAGSHTL	8	51	401.19040708219734	800.3662612311947	2	401.1905212402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEAGSHTL_	ENSG00000204592|ENST00000376630|HLA-E;ENSG00000204642|ENST00000259951|HLA-F;ENSG00000234745|ENST00000412585|HLA-B;ENST00000474381.1_1_6:31323854-31324663:-|nuORF;HLA-B|p.G124Wfs*15|1|0.18|ENSG00000234745|chr6:31356416-31356417|-/A|frameshift_variant;HLA-B|p.H215Tfs*11|1|0.35|ENSG00000234745|chr6:31355569-31355569|G/-|frameshift_variant;HLA-B|p.P209Qfs*5|6|0.16|ENSG00000234745|chr6:31355586-31355586|G/-|frameshift_variant;HLA-B|p.V306Afs*13|1|0.49|ENSG00000234745|chr6:31355202-31355202|A/-|frameshift_variant;HLA-B|p.V312Cfs*22|1|0.28|ENSG00000234745|chr6:31355185-31355186|-/A|frameshift_variant;nc|ENSG00000204642|P30511-2|HLA-F;nc|ENSG00000204642|P30511|HLA-F	85.35947970620816	0.2915182781752196	5				NaN	NaN	0	NaN	1627	3003	4629
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4633	18.051	NaN	2487.3	30	0	249.68	0.106	+			2006	AKKSTGPTQE	10	63	523.778132101746	NaN	0	523.77783203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AKKSTGPTQE_	nc|ENSG00000147394|O15231-4|ZNF185;nc|ENSG00000147394|O15231-6|ZNF185;nc|ENSG00000147394|O15231-7|ZNF185;nc|ENSG00000147394|O15231-8|ZNF185;nc|ENSG00000147394|O15231|ZNF185	48.601550744091256	0.31444367966696773	5				NaN	NaN	0	NaN	1628	3003	4629
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4634	18.053	NaN	772.67	30	0	83.375	0.106	+			34906	SAAEASRAM	9	42	447.2105712890625	NaN	0	447.2105712890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SAAEASRAM_	ENSG00000101940|ENST00000376729|WDR13;nc|ENSG00000101940|Q9H1Z4-2|WDR13	46.45678178249821	0.2311111838007999	5				NaN	NaN	0	NaN	1629	3003	4629
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4635	18.055	NaN	1594.4	30	0	165.23	0.034			+	2079	ALCIAVQSAP	10	51	486.764705613185	971.51485829317	2	486.76495361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ALCIAVQSAP_	REV__ENSG00000164082|ENST00000395052|GRM2;REV__ENST00000296479.9_1_3:51747995-51752125:+|nuORF	27.047317107675042	0.6589519614906109	5				NaN	NaN	0	NaN	1630	3003	4629
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4636	18.056	NaN	479.62	30	0	56.143	0.139			+	22813	KVFNKVPS	8	35	459.7736511230469	NaN	0	459.7736511230469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KVFNKVPS_	REV__ENST00000544861.5_1_12:104376657-104376945:+|nuORF	29.14955571784316	1.7418937515398478	5				NaN	NaN	0	NaN	1631	3003	4629
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4654	18.095	NaN	1869.5	30	0	374.19	0.214	+			48764	VTVSGGTPK	9	43	423.23986366041936	844.4651743876387	2	423.23980712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTVSGGTPK_	ENSG00000137804|ENST00000559596|NUSAP1;ENST00000558123.5_1_15:41625112-41672381:+|nuORF;nc|ENSG00000137804|Q9BXS6-2|NUSAP1;nc|ENSG00000137804|Q9BXS6-3|NUSAP1;nc|ENSG00000137804|Q9BXS6-4|NUSAP1;nc|ENSG00000137804|Q9BXS6-5|NUSAP1;nc|ENSG00000137804|Q9BXS6-6|NUSAP1;nc|ENSG00000137804|Q9BXS6-7|NUSAP1	72.87924865735499	0.12833875048249987	5				NaN	NaN	0	NaN	1646	3006	4653
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4655	18.098	NaN	3034.4	30	0	1751.1	0.106	+			49098	VVLENAAKK	9	29	324.5340270996094	NaN	0	324.5340270996094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVLENAAKK_	ENSG00000171824|ENST00000376936|EXOSC10;ENST00000474216.5_1_1:11126777-11137033:-|nuORF;nc|ENSG00000171824|Q01780-2|EXOSC10	33.51558372728122	0.30835390848773375	5				NaN	NaN	0	NaN	1647	3006	4653
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4656	18.1	NaN	1016.5	30	0	293.12	0.106	+			22168	KSSDVFSSK	9	40	492.753068526405	NaN	0	492.7530517578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KSSDVFSSK_	ENSG00000169435|ENST00000307439|RASSF6;nc|ENSG00000169435|Q6ZTQ3-3|RASSF6;nc|ENSG00000169435|Q6ZTQ3-4|RASSF6;nc|ENSG00000169435|Q6ZTQ3|RASSF6;RASSF6|p.K253Nfs*25|1|0.16|ENSG00000169435|chr4:73582195-73582195|T/-|frameshift_variant	51.52775601994872	0.19616436856719055	5				NaN	NaN	0	NaN	1648	3006	4653
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4657	18.102	NaN	1292	30	0	348.81	0.106			+	26743	LVMERNGG	8	40	438.2233755058105	874.432198078421	2	438.2238464355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LVMERNGG_	REV__ENSG00000168702|ENST00000389484|LRP1B;REV__LRP1B|p.C2682Vfs*15|1|0.3|ENSG00000168702|chr2:140516994-140516994|A/-|frameshift_variant;REV__LRP1B|p.C3762Lfs*2|1|0.32|ENSG00000168702|chr2:140358089-140358090|-/A|frameshift_variant;REV__LRP1B|p.G2081E|1|0.08|ENSG00000168702|chr2:140702201-140702201|C/T|missense_variant;REV__LRP1B|p.G4130Mfs*20|1|0.06|ENSG00000168702|chr2:140324019-140324020|-/AT|frameshift_variant;REV__LRP1B|p.H4368Tfs*4|1|0.47|ENSG00000168702|chr2:140274465-140274465|C/-|frameshift_variant;REV__LRP1B|p.I3028Nfs*2|1|0.39|ENSG00000168702|chr2:140492645-140492646|-/T|frameshift_variant;REV__LRP1B|p.K2543Nfs*42|1|0.08|ENSG00000168702|chr2:140536594-140536594|T/-|frameshift_variant;REV__LRP1B|p.N3100Kfs*6|1|0.21|ENSG00000168702|chr2:140485468-140485469|-/T|frameshift_variant;REV__LRP1B|p.N3434Tfs*84|1|0.47|ENSG00000168702|chr2:140442617-140442617|T/-|frameshift_variant;REV__LRP1B|p.N4135Mfs*14|1|0.13|ENSG00000168702|chr2:140324003-140324003|T/-|frameshift_variant;REV__LRP1B|p.R3957Kfs*11|2|0.15|ENSG00000168702|chr2:140350819-140350820|-/T|frameshift_variant;REV__LRP1B|p.T2640Pfs*5|1|0.12|ENSG00000168702|chr2:140525952-140525952|T/-|frameshift_variant;REV__LRP1B|p.Y3120*|1|0.16|ENSG00000168702|chr2:140485402-140485408|AGTAGGG/-|frameshift_variant	42.47446043378293	0.6409579893742323	5				NaN	NaN	0	NaN	1649	3006	4653
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4658	18.104	NaN	916.76	30	0	149.61	0.106	+			12037	FYIYKGVRKRL	11	40	481.6274108886719	NaN	0	481.6274108886719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FYIYKGVRKRL_	nc|ENSG00000140153|Q8TBZ3-4|WDR20;nc|ENSG00000140153|Q8TBZ3-5|WDR20;nc|ENSG00000140153|Q8TBZ3-6|WDR20	14.086013023434994	0.456735970842152	5				NaN	NaN	0	NaN	1650	3006	4653
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4659	18.106	NaN	2689.4	30	0	216.16	0.037			+	19225	KAAIRCTKNK	10	46	378.2250861212274	1131.653428963882	3	378.2250671386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KAAIRCTKNK_	REV__BCORL1|p.A1166Lfs*56|2|0.28|ENSG00000085185|chrX:130021034-130021034|G/-|frameshift_variant;REV__BCORL1|p.I1392Sfs*58|1|0.14|ENSG00000085185|chrX:130028726-130028726|G/-|frameshift_variant;REV__BCORL1|p.P1681Qfs*20|7|0.43|ENSG00000085185|chrX:130056036-130056036|C/-|frameshift_variant;REV__ENSG00000085185|ENST00000540052|BCORL1;REV__nc|ENSG00000085185|Q5H9F3-1|BCORL1;REV__nc|ENSG00000085185|Q5H9F3-4|BCORL1	40.05817265558897	0.5486090488315611	5				NaN	NaN	0	NaN	1651	3006	4653
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4660	18.106	NaN	1143	30	0	139.57	0.138	+			48031	VSRNLGPK	8	46	435.76129150390625	NaN	0	435.76129150390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VSRNLGPK_	ENSG00000144481|ENST00000324695|TRPM8;ENST00000444298.5_1_2:234856214-234923253:+|nuORF;nc|ENSG00000144481|Q7Z2W7-4|TRPM8	63.30626980617807	1.7418937515398478	5				NaN	NaN	0	NaN	1652	3006	4653
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4678	18.146	NaN	2560.3	30	0	620.51	0.214	+			4769	ATNDSVVADK	10	57	510.25341563988616	1018.4922783465723	2	510.25335693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATNDSVVADK_	ENSG00000205220|ENST00000358514|PSMB10;ENST00000575556.1_1_16:67970119-67970555:-|nuORF	116.83681978309235	0.03179725977375137	5				NaN	NaN	0	NaN	1667	3009	4677
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4679	18.149	NaN	3233	30	0	666.41	0.106			+	1986	AKDKLQKPK	9	41	352.55715065705783	NaN	0	352.5571594238281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AKDKLQKPK_	REV__ENSG00000100345|ENST00000216181|MYH9;REV__MYH9|p.I784*|1|0.07|ENSG00000100345|chr22:36304036-36304036|G/-|frameshift_variant;REV__nc|ENSG00000100345|P35579-2|MYH9	52.936696900407355	0.1864545979552969	5				NaN	NaN	0	NaN	1668	3009	4677
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4680	18.151	NaN	2280.6	30	0	720.86	0.106	+			47254	VMRDPQTK	8	34	487.75794920838393	NaN	0	487.7582702636719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VMRDPQTK_	ENSG00000170144|ENST00000392524|HNRNPA3;ENST00000437410.2_1_1:54441353-54441674:-|nuORF;ENST00000472163.1_1_3:75263799-75264780:+|nuORF;HNRNPA3|p.K200Rfs*147|1|0.13|ENSG00000170144|chr2:177216544-177216544|A/-|frameshift_variant;HNRNPA3|p.Y267Lfs*2|1|0.62|ENSG00000170144|chr2:177216918-177216919|-/T|frameshift_variant;nc|ENSG00000170144|P51991-2|HNRNPA3	52.936696900407355	1.7418937515398478	5				NaN	NaN	0	NaN	1669	3009	4677
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4681	18.153	NaN	589.09	30	0	92.937	0.106	+			50367	WVTILPAKK	9	32	528.3323364257812	NaN	0	528.3323364257812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_WVTILPAKK_	DEFB110|p.H11N|1|0.15|ENSG00000203970|chr6:50021905-50021905|G/T|missense_variant;ENSG00000203970|ENST00000371148|DEFB110	26.69291269510374	0.34280015626154364	5				NaN	NaN	0	NaN	1670	3009	4677
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4682	18.155	NaN	326.54	30	0	71.135	0.036	+			44324	TSFRKRET	8	17	342.18902587890625	NaN	0	342.18902587890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TSFRKRET_	ENST00000591091.1_1_19:36238326-36242943:-|nuORF	21.70233525837049	1.7418937515398478	5				NaN	NaN	0	NaN	1671	3009	4677
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4698	18.188	NaN	2694.5	30	0	377.22	0.214			+	21530	KNSKSPKNK	9	65	515.8039580477645	NaN	0	515.8038940429688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KNSKSPKNK_	REV__ENSG00000164190|ENST00000282516|NIPBL;REV__ENST00000504430.5_1_5:36961623-36995905:+|nuORF;REV__nc|ENSG00000164190|Q6KC79-2|NIPBL;REV__nc|ENSG00000164190|Q6KC79-3|NIPBL;REV__NIPBL|p.F1423Lfs*15|1|0.43|ENSG00000164190|chr5:37008032-37008032|T/-|frameshift_variant;REV__NIPBL|p.I2776Lfs*3|1|0.17|ENSG00000164190|chr5:37064797-37064797|A/-|frameshift_variant;REV__NIPBL|p.L2220Ffs*3|1|0.21|ENSG00000164190|chr5:37048567-37048568|-/T|frameshift_variant	82.24051045832904	0.06370642293906256	5				NaN	NaN	0	NaN	1684	3012	4697
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4699	18.192	NaN	1772.5	30	0	402.48	0.106	+			22046	KSIQSGPLK	9	49	479.2895626933478	956.5645724534957	2	479.2896728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KSIQSGPLK_	ENSG00000132305|ENST00000410111|IMMT;ENST00000474969.5_1_2:86385703-86422514:-|nuORF;ENST00000486633.1_1_2:86400704-86422514:-|nuORF;nc|ENSG00000132305|Q16891-2|IMMT;nc|ENSG00000132305|Q16891-3|IMMT;nc|ENSG00000132305|Q16891-4|IMMT	56.43379154798735	0.2433427591689151	5				NaN	NaN	0	NaN	1685	3012	4697
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4700	18.194	NaN	5231	30	0	983.83	0.106	+			47540	VQVEVLTSLK	10	69	372.56034629545053	1114.6592094865516	3	372.5591125488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VQVEVLTSLK_	ENSG00000149633|ENST00000279024|KIAA1755;KIAA1755|p.P752Lfs*11|1|0.15|ENSG00000149633|chr20:38223551-38223551|G/-|frameshift_variant	51.52775601994872	0.4429225830406686	5				NaN	NaN	0	NaN	1686	3012	4697
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4701	18.196	NaN	1115.6	30	0	234.4	0.106			+	26258	LSSTVLGHS	9	36	450.74212931593684	899.4697056986737	2	450.7425537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSSTVLGHS_	REV__ENSG00000204209|ENST00000374542|DAXX;REV__nc|ENSG00000204209|Q9UER7-3|DAXX	29.14955571784316	0.5308295550522326	5				NaN	NaN	0	NaN	1687	3012	4697
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4702	18.197	NaN	1825	30	0	376.66	0.106			+	-1	FPLAPMELA	9	41	502.75931234136505	1003.5040717495301	2	502.75927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_FPLAPM(Oxidation (M))ELA_	REV__ENST00000570827.6_1_17:9548127-9548559:+|nuORF	26.79610172149135	0.5528238334041078	5				NaN	NaN	0	NaN	1688	3012	4697
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4703	18.199	NaN	493.97	30	0	92.697	0.036			+	26760	LVPPSPPLPLS	11	35	558.8358154296875	NaN	0	558.8358154296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LVPPSPPLPLS_	REV__ENSG00000162426|ENST00000471889|SLC45A1;REV__ENST00000497660.5_1_1:8390216-8404070:+|nuORF	19.1035232394073	0.456735970842152	5				NaN	NaN	0	NaN	1689	3012	4697
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4747	18.298	NaN	4049.8	30	0	743.33	0.214	+			41068	SVIKNVSTK	9	62	488.2950864178098	974.5756199024196	2	488.29541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVIKNVSTK_	ENSG00000122257|ENST00000319715|RBBP6;nc|ENSG00000122257|Q7Z6E9-2|RBBP6;nc|ENSG00000122257|Q7Z6E9-4|RBBP6;RBBP6|p.D1432Vfs*9|1|0.04|ENSG00000122257|chr16:24571360-24571361|-/TTTTCCCTTTTTC|frameshift_variant;RBBP6|p.T1475Lfs*20|1|0.3|ENSG00000122257|chr16:24571483-24571483|A/-|frameshift_variant	128.60217544463768	0.015992218256422188	5				NaN	NaN	0	NaN	1724	3021	4746
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4748	18.301	NaN	1887.1	30	0	616.99	0.106				-1	 	0	31	537.2913042115832	1072.5680554899664	2	537.293701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1725	3021	4746
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4749	18.303	NaN	1202.5	30	0	547.21	0.106				-1	SLKRMMEK	8	40	519.7776489257812	NaN	0	519.7776489257812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_SLKRM(Oxidation (M))MEK_	ENSG00000126878|ENST00000247291|AIF1L;nc|ENSG00000126878|Q9BQI0-2|AIF1L;nc|ENSG00000126878|Q9BQI0-3|AIF1L;nc|ENSG00000126878|Q9BQI0-4|AIF1L	34.172542307311794	1.7418937515398478	5				NaN	NaN	0	NaN	1726	3021	4746
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4750	18.305	NaN	542.61	30	0	54.202	0.037			+	9672	ELTTLHYLAA	10	33	566.3051147460938	NaN	0	566.3051147460938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ELTTLHYLAA_	REV__ENSG00000162763|ENST00000294818|LRRC52	30.503639358989545	0.4000169810673414	5				NaN	NaN	0	NaN	1727	3021	4746
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4764	18.334	NaN	1210.2	30	0	217.8	0.143	+			20543	KFLKVPAPK	9	52	514.3361593081266	NaN	0	514.3355712890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KFLKVPAPK_	ENST00000527368.5_1_11:66512338-66529578:+|nuORF	31.529811441608018	0.3183796599642538	5				NaN	NaN	0	NaN	1738	3024	4763
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4782	18.373	NaN	3525.5	30	0	437.08	0.214	+			27135	MASRTSSEM	9	62	500.2160433783861	998.4175338235722	2	500.2162170410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MASRTSSEM_	ENSG00000265972|ENST00000582401|TXNIP;ENST00000488537.1_1_1:145440673-145441098:+|nuORF;nc|ENSG00000265972|Q9H3M7-2|TXNIP	98.58198989935565	0.04066992115528678	5				NaN	NaN	0	NaN	1753	3027	4781
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4783	18.377	NaN	1916.2	30	0	466.68	0.106	+			35623	SCCPVGCSK	9	43	470.68791759019683	NaN	0	470.6879577636719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SCC(Carbamidomethyl (C))PVGCSK_	ENSG00000198417|ENST00000334350|MT1F;ENST00000564295.1_1_16:56692857-56693073:+|nuORF	87.69643885390035	0.04624013146650493	5				NaN	NaN	0	NaN	1754	3027	4781
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4784	18.378	NaN	1535.9	30	0	380.65	0.035			+	2852	ASALSTFSLQ	10	52	512.7690539858495	1023.523555038499	2	512.7699584960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASALSTFSLQ_	REV__CEP295|p.F1469Yfs*47|1|0.31|ENSG00000166004|chr11:93699317-93699318|-/ATCCAGCC|frameshift_variant;REV__CEP295|p.L2479Ffs*6|1|0.29|ENSG00000166004|chr11:93729651-93729651|A/-|frameshift_variant;REV__ENSG00000166004|ENST00000325212|CEP295;REV__nc|ENSG00000166004|Q9C0D2-3|CEP295	47.657333605630114	0.47858658696240314	5				NaN	NaN	0	NaN	1755	3027	4781
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4796	18.404	NaN	4123.8	30	0	1533.7	0.214	+			5124	ATSSTLVSK	9	49	447.2505106468034	892.4864683604068	2	447.2507629394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSSTLVSK_	ENST00000332782.6_1_12:57640633-57642538:-|nuORF	75.04331003522576	0.118981335847003	5				NaN	NaN	0	NaN	1764	3030	4795
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4797	18.408	NaN	987.12	30	0	100.95	0.035	+			19764	KEAEKSPQL	9	44	515.2835693359375	NaN	0	515.2835693359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEAEKSPQL_	ENSG00000116213|ENST00000270708|WRAP73;ENST00000469643.1_1_1:3549956-3551942:-|nuORF;ENST00000471223.1_1_1:3549956-3550340:-|nuORF;ENST00000497940.5_1_1:3549956-3553597:-|nuORF	45.02220120713402	0.24099765136254067	5				NaN	NaN	0	NaN	1765	3030	4795
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4811	18.437	NaN	47804	30	0	5313.5	0.214	+			34387	RTSEIYVHR	9	95	387.54375651359305	1159.6094401409791	3	387.5441589355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTSEIYVHR_	ENSG00000089737|ENST00000621632|DDX24;ENST00000555762.1_1_14:94517539-94521656:-|nuORF;nc|ENSG00000089737|Q9GZR7-2|DDX24	106.88024417677582	0.032181361622142884	5				NaN	NaN	0	NaN	1776	3033	4810
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4812	18.44	NaN	1766.9	30	0	509.22	0.033	+			35510	SAVAGKVVK	9	50	429.77401203214396	NaN	0	429.7742004394531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAVAGKVVK_	nc|ENSG00000155090|Q13118-4|KLF10	39.252832667884924	0.27938773122138094	5				NaN	NaN	0	NaN	1777	3033	4810
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4829	18.475	NaN	706.73	30	0	88.85	0.143	+			19798	KEASTTVRV	9	34	495.78240966796875	NaN	0	495.78240966796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEASTTVRV_	ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;nc|ENSG00000185164|Q5JPE7-3|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2;NOMO1|p.P1102Hfs*42|1|0.36|ENSG00000103512|chr16:14886838-14886838|C/-|frameshift_variant	27.047317107675042	0.34101084205454363	5				NaN	NaN	0	NaN	1791	3036	4828
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4845	18.51	NaN	13136	30	0	4861.5	0.214	+			14481	GTCGKSLISK	10	71	525.7837996171841	1049.553046301168	2	525.7852172851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GTC(Carbamidomethyl (C))GKSLISK_	ENSG00000118322|ENST00000327245|ATP10B	102.0615471778698	0.07157459376830236	5				NaN	NaN	0	NaN	1804	3039	4844
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4846	18.513	NaN	2313	30	0	659.31	0.106			+	44808	TTRGGFRL	8	44	454.25836609984395	906.5021792664879	2	454.25848388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTRGGFRL_	REV__ENSG00000102452|ENST00000251127|NALCN	30.503639358989545	0.7238069182250283	5				NaN	NaN	0	NaN	1805	3039	4844
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4847	18.515	NaN	2362.5	30	0	215.66	0.038			+	16086	HDEAGVGIYTH	11	55	599.7762231497492	1197.5378933662982	2	599.7769165039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HDEAGVGIYTH_	REV__ENST00000397861.6_1_17:54910427-54911098:-|nuORF	60.11826168202944	0.32239947305776	5				NaN	NaN	0	NaN	1806	3039	4844
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4857	18.537	NaN	1242.8	30	0	124.72	0.214				-1	LSQVCVEH	8	49	486.23382568359375	NaN	0	486.23382568359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_LSQVC(Carbamidomethyl (C))VEH_	DDX52|p.F49Lfs*30|1|0.05|ENSG00000278053|chr17:37642249-37642249|A/-|frameshift_variant	71.37791200682192	1.7418937515398478	5				NaN	NaN	0	NaN	1813	3042	4856
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4858	18.541	NaN	5416.2	30	0	1120.3	0.034	+			110	AAEKGVRTL	9	55	472.77923583984375	NaN	0	472.77923583984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAEKGVRTL_	ENSG00000105355|ENST00000221957|PLIN3;nc|ENSG00000105355|O60664-3|PLIN3;nc|ENSG00000105355|O60664-4|PLIN3	54.722347961057174	0.17414871455573902	5				NaN	NaN	0	NaN	1814	3042	4856
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4875	18.575	NaN	6567.9	30	0	2835.8	0.214	+			14443	GTATTMVSK	9	63	448.2308789516495	894.447204970099	2	448.2306823730469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTATTMVSK_	ENSG00000204217|ENST00000374580|BMPR2	78.26377905018397	0.10505600812668463	5				NaN	NaN	0	NaN	1828	3045	4874
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4876	18.579	NaN	15112	30	0	3169	0.106	+			39445	STEKIYIRK	9	72	379.8922158469537	1136.6548181410612	3	379.8924865722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STEKIYIRK_	ENSG00000120798|ENST00000333003|NR2C1;ENSG00000177463|ENST00000425241|NR2C2;ENST00000475707.5_1_3:15045421-15079667:+|nuORF;nc|ENSG00000120798|P13056-2|NR2C1;nc|ENSG00000120798|P13056-3|NR2C1;nc|ENSG00000177463|P49116-2|NR2C2;NR2C2|p.F563Lfs*10|1|0.4|ENSG00000177463|chr3:15042899-15042899|T/-|frameshift_variant	90.60085204095205	0.06317133949006545	5				NaN	NaN	0	NaN	1829	3045	4874
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4877	18.581	NaN	1521.9	30	0	180.08	0.035	+			40575	SVAEHPLSR	9	47	498.26776123046875	NaN	0	498.26776123046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVAEHPLSR_	ENSG00000142207|ENST00000382751|URB1;URB1|p.R2106W|1|0.08|ENSG00000142207|chr21:32316784-32316784|G/A|missense_variant	72.87924865735499	0.09578366712754152	5				NaN	NaN	0	NaN	1830	3045	4874
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4895	18.616	NaN	17563	30	0	5078.2	0.214	+			40297	STSSPYVSK	9	62	478.23994943161955	954.4653459300391	2	478.2403259277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STSSPYVSK_	ENSG00000137501|ENST00000359152|SYTL2;ENST00000438197.2_1_11:85444955-85468786:-|nuORF;nc|ENSG00000137501|Q9HCH5-13|SYTL2;nc|ENSG00000137501|Q9HCH5-14|SYTL2;nc|ENSG00000137501|Q9HCH5-15|SYTL2;nc|ENSG00000137501|Q9HCH5-6|SYTL2;nc|ENSG00000137501|Q9HCH5|SYTL2;SYTL2|p.Q663Tfs*35|1|0.14|ENSG00000137501|chr11:85709344-85709345|-/T|frameshift_variant	109.47833844074708	0.029530294723441826	5				NaN	NaN	0	NaN	1845	3048	4894
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4896	18.62	NaN	1955.7	30	0	303.57	0.106	+			12713	GEKSVHEGAL	10	58	513.7654004530505	NaN	0	513.7653198242188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEKSVHEGAL_	ENSG00000079819|ENST00000337057|EPB41L2	63.53385203322761	0.20542021811828953	5				NaN	NaN	0	NaN	1846	3048	4894
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4897	18.622	NaN	468.89	30	0	43.755	0.106			+	22886	KVLQLDQH	8	33	490.7798767089844	NaN	0	490.7798767089844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KVLQLDQH_	REV__ENSG00000117676|ENST00000374168|RPS6KA1;REV__nc|ENSG00000117676|Q15418-2|RPS6KA1;REV__nc|ENSG00000117676|Q15418-3|RPS6KA1;REV__nc|ENSG00000117676|Q15418-4|RPS6KA1	65.80317337860623	1.7418937515398478	5				NaN	NaN	0	NaN	1847	3048	4894
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4898	18.624	NaN	3431.3	30	0	1248.9	0.106	+			2998	ASFDKAKLK	9	53	504.2969185766803	1006.5792842201606	2	504.2987060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASFDKAKLK_	ENSG00000034510|ENST00000233143|TMSB10	85.16082228582465	0.07850854922700509	5				NaN	NaN	0	NaN	1848	3048	4894
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4899	18.625	NaN	1275.1	30	0	203.21	0.106	+			4090	ATDNAKIIGK	10	49	515.798193540633	1029.5818341480658	2	515.7990112304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATDNAKIIGK_	ENSG00000135945|ENST00000258428|REV1;ENST00000413697.5_1_2:100019089-100065949:-|nuORF;nc|ENSG00000135945|Q9UBZ9-2|REV1;REV1|p.T1079Pfs*12|1|0.42|ENSG00000135945|chr2:99403038-99403038|T/-|frameshift_variant	70.8162118820467	0.27065172005956	5				NaN	NaN	0	NaN	1849	3048	4894
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4900	18.627	NaN	1895.2	30	0	274.74	0.106	+			15965	HAHVDKVTY	9	56	535.2746367803709	1068.5347206275417	2	535.2759399414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HAHVDKVTY_	ENSG00000181396|ENST00000313056|OGFOD3;nc|ENSG00000181396|Q6PK18-2|OGFOD3	67.49366992349736	0.1516260258713357	5				NaN	NaN	0	NaN	1850	3048	4894
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4901	18.629	NaN	1623.6	30	0	165.81	0.035	+			41744	SVSKDVVVSK	10	46	524.3052389410706	1046.595924948941	2	524.3073120117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVSKDVVVSK_	E4F1|p.E388Gfs*55|1|0.48|ENSG00000167967|chr16:2233539-2233540|-/G|frameshift_variant;E4F1|p.E717Rfs*3|1|0.25|ENSG00000167967|chr16:2235361-2235361|C/-|frameshift_variant;ENSG00000167967|ENST00000301727|E4F1;ENST00000569796.1_1_16:2282158-2283271:+|nuORF	79.07001860377117	0.20321883041390024	5				NaN	NaN	0	NaN	1851	3048	4894
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4905	18.642	NaN	4514.1	30	0	905.34	0.141	+			3730	ATAAVSSMK	9	48	433.22566855352414	864.4367841738483	2	433.2257995605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATAAVSSMK_	ADD3-MXI1|1|fusion;ENSG00000148700|ENST00000356080|ADD3;nc|ENSG00000148700|Q9UEY8-2|ADD3	93.5975768576971	0.05472259948179787	5				NaN	NaN	0	NaN	1852	3051	4904
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4921	18.676	NaN	1939.4	30	0	507.4	0.143	+			40095	STNSPVGVSK	10	43	488.2585173143337	974.5024816954674	2	488.2582092285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STNSPVGVSK_	ENSG00000165671|ENST00000439151|NSD1;nc|ENSG00000165671|Q96L73-2|NSD1;nc|ENSG00000165671|Q96L73-3|NSD1;NSD1|p.K1753Sfs*10|1|0.17|ENSG00000165671|chr5:177267669-177267669|A/-|frameshift_variant	55.08391021199286	0.41055145962533396	5				NaN	NaN	0	NaN	1865	3054	4920
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4939	18.714	NaN	8949.1	30	0	3803.4	0.214	+			4732	ATMKTELQK	9	64	525.285668680753	1048.556784428306	2	525.2869262695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATMKTELQK_	ENSG00000096696|ENST00000379802|DSP;nc|ENSG00000096696|P15924-2|DSP;nc|ENSG00000096696|P15924-3|DSP	154.1183686248401	0.005909203230691971	5				NaN	NaN	0	NaN	1880	3057	4938
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4940	18.718	NaN	5224.1	30	0	863.79	0.106	+			6259	AVSKLYASK	9	59	483.78419941957463	965.5538459059493	2	483.7845153808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVSKLYASK_	ENSG00000115561|ENST00000263856|CHMP3;ENST00000466032.1_1_2:86754275-86769420:-|nuORF;nc|ENSG00000115561|Q9Y3E7-2|CHMP3;nc|ENSG00000115561|Q9Y3E7-3|CHMP3	136.98908636845044	0.011892605960677736	5				NaN	NaN	0	NaN	1881	3057	4938
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4941	18.72	NaN	3302.1	30	0	580.12	0.036				-1	SNGLAGCEML	10	61	534.2276724337647	1066.4407919343294	2	534.2291259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_SNGLAGC(Carbamidomethyl (C))EM(Oxidation (M))L_	ENSG00000115109.14,EPB41L5,chr2,+,I25.1,120164911,120167465|105|7.95|1|intron;ENSG00000115109.14,EPB41L5,chr2,+,I25.1,120164911,120167465|105|7.95|11|intron;ENSG00000115109.14,EPB41L5,chr2,+,I25.1,120164911,120167465|105|7.95|13|intron;ENSG00000115109.14,EPB41L5,chr2,+,I25.1,120164911,120167465|105|7.95|3|intron;ENSG00000115109.14,EPB41L5,chr2,+,I25.1,120164911,120167465|105|7.95|5|intron;ENSG00000115109.14,EPB41L5,chr2,+,I25.1,120164911,120167465|105|7.95|7|intron;ENSG00000115109.14,EPB41L5,chr2,+,I25.1,120164911,120167465|105|7.95|8|intron;ENSG00000115109.14,EPB41L5,chr2,+,I25.1,120164911,120167465|105|7.95|9|intron;ENSG00000115109|ENST00000263713|EPB41L5;EPB41L5|p.P702Qfs*6|1|0.31|ENSG00000115109|chr2:120167973-120167973|C/-|frameshift_variant;nc|ENSG00000115109|Q9HCM4-3|EPB41L5	39.252832667884924	0.5560298534376815	5				NaN	NaN	0	NaN	1882	3057	4938
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4959	18.757	NaN	16863	30	0	2625.7	0.214	+			22960	KVQTAVTMK	9	70	503.2916606741732	1004.5687684151465	2	503.29144287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVQTAVTMK_	ENSG00000131165|ENST00000397901|CHMP1A;ENST00000550872.1_1_16:89715668-89724092:-|nuORF	168.25843898104137	0.0030641937004078144	5				NaN	NaN	0	NaN	1897	3060	4958
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4960	18.761	NaN	3024.6	30	0	439.26	0.106	+			20200	KELEKTYSA	9	71	534.7814969630309	1067.5484409928617	2	534.7826538085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KELEKTYSA_	ENSG00000160789|ENST00000368300|LMNA;ENST00000496738.5_1_1:156104631-156105741:+|nuORF;nc|ENSG00000160789|P02545-2|LMNA;nc|ENSG00000160789|P02545-3|LMNA;nc|ENSG00000160789|P02545-4|LMNA;nc|ENSG00000160789|P02545-5|LMNA;nc|ENSG00000160789|P02545-6|LMNA	61.76455937419982	0.19890525308472518	5				NaN	NaN	0	NaN	1898	3060	4958
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4961	18.763	NaN	1638.5	30	0	145.13	0.106	+			40140	STQIVANAK	9	45	466.263980335118	NaN	0	466.263671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STQIVANAK_	ENSG00000147872|ENST00000276914|PLIN2;PLIN2|p.V348*|1|0.15|ENSG00000147872|chr9:19116520-19116520|C/-|frameshift_variant	80.45461616416974	0.0698259577396595	5				NaN	NaN	0	NaN	1899	3060	4958
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4962	18.765	NaN	1015.8	30	0	135.8	0.033			+	45294	TVSAATTAAV	10	40	446.2448389357748	NaN	0	446.24468994140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TVSAATTAAV_	REV__ENST00000338302.7_1_1:156876157-156878457:+|nuORF;REV__ENST00000469390.5_1_1:156876157-156877908:+|nuORF;REV__PEAR1|p.F100Sfs*277|1|0.18|ENSG00000187800|chr1:156905410-156905410|G/-|frameshift_variant;REV__PEAR1|p.P252Lfs*125|3|0.12|ENSG00000187800|chr1:156907715-156907715|C/-|frameshift_variant	58.78195531508484	0.24422493511477816	5				NaN	NaN	0	NaN	1900	3060	4958
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4980	18.802	NaN	5347.9	30	0	1655.2	0.215	+			16438	HESGHAIIA	9	54	467.7410004688735	NaN	0	467.74114990234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HESGHAIIA_	ENSG00000136758|ENST00000376016|YME1L1;nc|ENSG00000136758|Q96TA2-3|YME1L1;nc|ENSG00000136758|Q96TA2|YME1L1	47.91560031466742	0.22105767942158736	5				NaN	NaN	0	NaN	1915	3063	4979
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4981	18.805	NaN	628.06	30	0	75.961	0.033			+	37606	SLPRQIAIRQQ	11	33	437.2618103027344	NaN	0	437.2618103027344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLPRQIAIRQQ_	REV__ENST00000487169.5_1_2:242182083-242186294:-|nuORF	17.16674453292914	0.456735970842152	5				NaN	NaN	0	NaN	1916	3063	4979
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4999	18.842	NaN	3887.1	30	0	1029	0.214			+	45982	VATGAAIKG	9	39	394.2375655266318	786.4605781200636	2	394.2376403808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VATGAAIKG_	REV__ENST00000321448.12_1_11:74648098-74660104:-|nuORF;REV__ENST00000530562.5_1_11:74648079-74660104:-|nuORF	63.30626980617807	0.18605348971131092	5				NaN	NaN	0	NaN	1931	3066	4998
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5000	18.846	NaN	3574	30	0	439.87	0.106	+			19522	KAVNPGRSL	9	49	471.279866025235	940.54517911727	2	471.2803955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KAVNPGRSL_	ENSG00000103429|ENST00000261658|BFAR;nc|ENSG00000103429|Q9NZS9-2|BFAR	54.776311868738084	0.25715957988447635	5				NaN	NaN	0	NaN	1932	3066	4998
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5001	18.848	NaN	1746.6	30	0	241.19	0.037	+			34557	RVLEAIQKK	9	47	362.23307866215634	NaN	0	362.2332458496094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RVLEAIQKK_	ENSG00000169375|ENST00000394947|SIN3A;SIN3A|p.G659Afs*26|1|0.14|ENSG00000169375|chr15:75396375-75396375|C/-|frameshift_variant	79.48907831485694	0.07313446400987221	5				NaN	NaN	0	NaN	1933	3066	4998
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5016	18.879	NaN	12695	30	0	4269.4	0.214	+			7915	DSEGSTKVL	9	73	468.23792752015845	934.4613021071169	2	468.2381286621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DSEGSTKVL_	ENSG00000185658|ENST00000342449|BRWD1;nc|ENSG00000185658|Q9NSI6-3|BRWD1;nc|ENSG00000185658|Q9NSI6|BRWD1	87.69643885390035	0.07135982304947239	5				NaN	NaN	0	NaN	1945	3069	5015
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5017	18.883	NaN	26726	30	0	10855	0.106	+			3981	ATATVSVGK	9	60	417.2398807483565	832.465208563513	2	417.2401123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATATVSVGK_	ENSG00000261150|ENST00000615648|EPPK1;EPPK1|p.G2015Vfs*36|2|0.33|ENSG00000261150|chr8:143867210-143867210|C/-|frameshift_variant;EPPK1|p.Q829Rfs*8|1|0.05|ENSG00000261150|chr8:143870770-143870770|C/-|frameshift_variant;EPPK1|p.Y695Ifs*68|1|0.36|ENSG00000261150|chr8:143871171-143871172|-/T|frameshift_variant	126.24258497203832	0.01742065577488747	5				NaN	NaN	0	NaN	1946	3069	5015
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5018	18.885	NaN	983.16	30	0	269.18	0.106			+	24806	LIMAPPLLC	9	43	485.77485703967426	NaN	0	485.7755126953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LIMAPPLLC_	REV__ENST00000517951.5_1_5:156822576-156936463:-|nuORF	39.021493756699265	0.2805557132942146	5				NaN	NaN	0	NaN	1947	3069	5015
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5019	18.887	NaN	1825.8	30	0	398.44	0.106	+			39870	STLPKPVQK	9	52	499.3060212127823	996.5974894923646	2	499.30621337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STLPKPVQK_	ENSG00000040341|ENST00000524300|STAU2;ENST00000521293.5_1_8:74529642-74659041:-|nuORF;ENST00000522962.5_1_8:74566130-74621380:-|nuORF;ENST00000524113.5_1_8:74585313-74650536:-|nuORF;nc|ENSG00000040341|Q9NUL3-2|STAU2;nc|ENSG00000040341|Q9NUL3-3|STAU2;nc|ENSG00000040341|Q9NUL3-5|STAU2;nc|ENSG00000040341|Q9NUL3-8|STAU2;STAU2|p.C491Lfs*31|1|0.39|ENSG00000040341|chr8:73552072-73552073|-/G|frameshift_variant;STAU2|p.F158Lfs*16|1|0.27|ENSG00000040341|chr8:73617388-73617388|A/-|frameshift_variant;STAU2|p.K274Nfs*22|1|0.09|ENSG00000040341|chr8:73613813-73613813|T/-|frameshift_variant;STAU2|p.K410Ifs*9|1|0.07|ENSG00000040341|chr8:73552313-73552314|-/A|frameshift_variant;STAU2|p.L259Tfs*15|2|0.48|ENSG00000040341|chr8:73613860-73613861|-/T|frameshift_variant	56.43379154798735	0.2433427591689151	5				NaN	NaN	0	NaN	1948	3069	5015
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5020	18.889	NaN	4245.3	30	0	909.91	0.038				-1	STLEECYLFG	10	51	406.8498742279722	1217.5277932841166	3	406.8505554199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_STLEEC(Carbamidomethyl (C))YLFG_	ENST00000588737.5_1_18:33610974-33611055:-|nuORF	36.446750945000026	0.5818864909973037	5				NaN	NaN	0	NaN	1949	3069	5015
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5038	18.925	NaN	3412.7	30	0	370.31	0.214	+			13528	GLQVSLGAA	9	58	408.2343002118245	814.454047490449	2	408.2344055175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GLQVSLGAA_	ENSG00000169258|ENST00000303991|GPRIN1	29.14955571784316	0.5308295550522326	5				NaN	NaN	0	NaN	1964	3072	5037
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5039	18.929	NaN	709.75	30	0	127.79	0.106	+			29652	PGLAGKNG	8	29	357.20062255859375	NaN	0	357.20062255859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PGLAGKNG_	COL6A2|p.P584Lfs*12|1|0.46|ENSG00000142173|chr21:46124896-46124896|C/-|frameshift_variant;ENSG00000142173|ENST00000300527|COL6A2;nc|ENSG00000142173|P12110-2|COL6A2;nc|ENSG00000142173|P12110-3|COL6A2	35.200714571348534	1.7418937515398478	5				NaN	NaN	0	NaN	1965	3072	5037
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5040	18.931	NaN	1730.4	30	0	466.86	0.035	+			22188	KSSVPRMTP	9	46	501.77351144981134	1001.5324699664227	2	501.7732238769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KSSVPRMTP_	ENST00000338272.8_1_1:109637211-109637328:+|nuORF	60.11826168202944	0.21262886028301267	5				NaN	NaN	0	NaN	1966	3072	5037
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5058	18.969	NaN	15510	30	0	5042.3	0.215			+	19975	KEGVTVTK	8	64	431.2554408660199	NaN	0	431.25543212890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEGVTVTK_	REV__ENSG00000066933|ENST00000356056|MYO9A;REV__ENST00000563542.5_1_15:72185266-72338904:-|nuORF;REV__MYO9A|p.L1961*|2|0.14|ENSG00000066933|chr15:71878089-71878089|A/-|frameshift_variant;REV__MYO9A|p.Y1422Ifs*8|1|0.18|ENSG00000066933|chr15:71898239-71898239|A/-|frameshift_variant;REV__nc|ENSG00000066933|B2RTY4-2|MYO9A;REV__nc|ENSG00000066933|B2RTY4-3|MYO9A;REV__nc|ENSG00000066933|B2RTY4-4|MYO9A;REV__nc|ENSG00000066933|B2RTY4-5|MYO9A	101.25262130126117	1.7418937515398478	5				NaN	NaN	0	NaN	1981	3075	5057
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5059	18.972	NaN	635.55	30	0	105.6	0.106	+			39979	STMKTYVSK	9	33	522.7738647460938	NaN	0	522.7738647460938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STMKTYVSK_	ENSG00000198919|ENST00000361582|DZIP3;ENST00000495008.5_1_3:108373019-108406879:+|nuORF	28.081489160057373	0.33578952234132536	5				NaN	NaN	0	NaN	1982	3075	5057
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5060	18.974	NaN	2317.8	30	0	265.12	0.106			+	5584	AVATAQALQ	9	52	436.7450134163895	871.475473899579	2	436.7449645996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVATAQALQ_	REV__BPTF|p.D2844Afs*20|1|0.08|ENSG00000171634|chr17:67959766-67959767|-/C|frameshift_variant;REV__ENSG00000171634|ENST00000306378|BPTF;REV__nc|ENSG00000171634|Q12830-4|BPTF;REV__nc|ENSG00000171634|Q12830|BPTF	73.97473282117947	0.12360187025703594	5				NaN	NaN	0	NaN	1983	3075	5057
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5061	18.976	NaN	5874.8	30	0	830.32	0.106	+			49324	VVSEKQFSK	9	67	526.2923825303868	1050.5702121275735	2	526.2929077148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVSEKQFSK_	ENSG00000163584|ENST00000295830|RPL22L1	107.45493779368988	0.031594950556992824	5				NaN	NaN	0	NaN	1984	3075	5057
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5062	18.978	NaN	4401	30	0	654.13	0.106			+	45186	TVMPLELPQ	9	64	514.2798851145909	1026.5452172959817	2	514.2805786132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TVMPLELPQ_	REV__ENSG00000068079|ENST00000415816|IFI35;REV__ENST00000246911.6_1_17:41158964-41165399:+|nuORF;REV__nc|ENSG00000068079|P80217-2|IFI35	51.33545320467046	0.2872990594074956	5				NaN	NaN	0	NaN	1985	3075	5057
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5063	18.979	NaN	2282.2	30	0	518.99	0.042			+	-1	RVCYIKNESDM	11	56	491.5531921386719	NaN	0	491.5531921386719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term),Carbamidomethyl (C),Oxidation (M)	_(Acetyl (Protein N-term))RVC(Carbamidomethyl (C))YIKNESDM(Oxidation (M))_	REV__LIMD1|p.V577M|1|0.09|ENSG00000144791|chr3:45672777-45672777|G/A|missense_variant	15.33747794439485	0.456735970842152	5				NaN	NaN	0	NaN	1986	3075	5057
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5064	18.98	NaN	2306.8	30	0	372.61	0.141			+	19561	KCNNKRRR	8	55	537.8046246458371	1073.594696358474	2	537.8053588867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KCNNKRRR_	REV__ENST00000245441.9_2_14:51226857-51226965:-|nuORF	51.33545320467046	0.5859736979383976	5				NaN	NaN	0	NaN	1987	3075	5057
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5082	19.019	NaN	4104.4	30	0	283.98	0.214			+	-1	TTLESDDRMWK	11	59	466.5512470776418	NaN	0	466.55133056640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_TTLESDDRM(Oxidation (M))WK_	REV__ENSG00000146555|ENST00000404826|SDK1;REV__nc|ENSG00000146555|Q7Z5N4-3|SDK1;REV__SDK1|p.Q1487Pfs*37|1|0.27|ENSG00000146555|chr7:4149293-4149294|-/C|frameshift_variant;REV__SDK1|p.V1762Wfs*2|1|0.28|ENSG00000146555|chr7:4208168-4208168|G/-|frameshift_variant	37.59989570853033	0.39784920612721525	5				NaN	NaN	0	NaN	2002	3078	5081
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5083	19.023	NaN	1853.1	30	0	159.44	0.033			+	24519	LGKQSQAL	8	45	422.74797217985616	843.4813914265123	2	422.7484436035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LGKQSQAL_	REV__ENSG00000164944|ENST00000297591|VIRMA;REV__nc|ENSG00000164944|Q69YN4-2|VIRMA;REV__nc|ENSG00000164944|Q69YN4-3|VIRMA;REV__nc|ENSG00000164944|Q69YN4-4|VIRMA	68.78682469695295	0.41700713582915416	5				NaN	NaN	0	NaN	2003	3078	5081
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5099	19.056	NaN	6275.3	30	0	1546.8	0.214	+			22512	KTQAISISK	9	62	488.29527260416234	974.5759922751247	2	488.2956848144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTQAISISK_	ENSG00000130787|ENST00000253083|HIP1R;ENST00000452196.6_1_12:123320097-123341792:+|nuORF;HIP1R|p.A781Pfs*24|1|0.19|ENSG00000130787|chr12:122859467-122859467|G/-|frameshift_variant;HIP1R|p.E1021Vfs*2|1|0.32|ENSG00000130787|chr12:122861412-122861445|AGAGGAGGTGGCCATCCGGCCCAGCACTGCCCCC/-|frameshift_variant;HIP1R|p.N345Mfs*4|3|0.29|ENSG00000130787|chr12:122855584-122855584|C/-|frameshift_variant;nc|ENSG00000130787|O75146-2|HIP1R	122.93914200107957	0.019420478173996256	5				NaN	NaN	0	NaN	2016	3081	5098
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5100	19.059	NaN	2320	30	0	301.96	0.106			+	30863	QEIIDSFR	8	56	504.26304351285603	1006.5115340925121	2	504.2633361816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QEIIDSFR_	REV__ENSG00000221886|ENST00000408953|FAM200C	66.42927471994793	0.4381325844043345	5				NaN	NaN	0	NaN	2017	3081	5098
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5101	19.061	NaN	1733.7	30	0	288.19	0.106			+	14263	GSTIFRPRQ	9	45	531.2941284179688	NaN	0	531.2941284179688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GSTIFRPRQ_	REV__ENSG00000166887|ENST00000318006|VPS39;REV__ENST00000568029.5_1_15:42462052-42470793:-|nuORF;REV__nc|ENSG00000166887|Q96JC1|VPS39	42.86426827375447	0.2558691296974908	5				NaN	NaN	0	NaN	2018	3081	5098
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5102	19.063	NaN	6538.5	30	0	1265.8	0.106	+			38851	SSNQSLLL	8	52	431.2360197335264	860.4574865338528	2	431.2353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSNQSLLL_	ENST00000403263.5_1_2:206867288-206867456:-|nuORF	30.503639358989545	0.7238069182250283	5				NaN	NaN	0	NaN	2019	3081	5098
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5103	19.065	NaN	1743.1	30	0	252.38	0.106			+	32574	QWNKKANGAG	10	65	537.2779406859963	1072.5413284387926	2	537.2789916992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QWNKKANGAG_	REV__ENSG00000059588|ENST00000040877|TARBP1;REV__ENST00000483404.5_1_1:234536679-234541836:-|nuORF	60.97194046774394	0.3570005369683776	5				NaN	NaN	0	NaN	2020	3081	5098
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5104	19.067	NaN	5499.7	30	0	884.8	0.033			+	24656	LGTRQTVT	8	61	438.25054576671647	874.486538600233	2	438.2508239746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LGTRQTVT_	REV__ENST00000306243.6_1_15:40764549-40764810:+|nuORF	50.0245360154114	0.5941082100236891	5				NaN	NaN	0	NaN	2021	3081	5098
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5122	19.103	NaN	13550	30	0	4869.3	0.215	+			19303	KAGEVFIHK	9	67	514.7976847068132	1027.5808164804264	2	514.7982177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAGEVFIHK_	ENSG00000147140|ENST00000276079|NONO;ENST00000486613.6_1_X:70504267-70513876:+|nuORF;ENST00000566277.2_1_16:69791529-69791679:-|nuORF;nc|ENSG00000147140|Q15233-2|NONO	133.9934435666947	0.013297982075521412	5				NaN	NaN	0	NaN	2036	3084	5121
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5123	19.107	NaN	3657.8	30	0	680.5	0.106	+			43733	TLAASLTQ	8	54	402.7267448887132	NaN	0	402.72674560546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TLAASLTQ_	MER65-int_dup835|chr19:41770581-41771297:+|1.820753605061792|0.0130686126071448|7.12|477.0|14|2|sense	45.9519527083369	1.7418937515398478	5				NaN	NaN	0	NaN	2037	3084	5121
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5124	19.109	NaN	1552.6	30	0	172.77	0.106			+	16275	HEGDKVLKE	9	49	527.7805153943157	NaN	0	527.7806396484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HEGDKVLKE_	REV__ENSG00000005249|ENST00000265717|PRKAR2B	32.81241826257853	0.3119040447479903	5				NaN	NaN	0	NaN	2038	3084	5121
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5125	19.11	NaN	1143.5	30	0	154.9	0.035	+			41628	SVQRPGLAR	9	50	492.29083479453675	NaN	0	492.2908020019531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVQRPGLAR_	ENSG00000102901|ENST00000562787|CENPT;ENST00000562513.6_1_16:67862078-67865741:-|nuORF;ENST00000562947.5_1_16:67864542-67866179:-|nuORF;ENST00000565157.5_1_16:67864257-67867798:-|nuORF;ENST00000569862.5_1_16:67865068-67866179:-|nuORF;nc|ENSG00000102901|Q96BT3-2|CENPT	87.69643885390035	0.04624013146650493	5				NaN	NaN	0	NaN	2039	3084	5121
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5143	19.148	NaN	42176	30	0	16790	0.214	+			46931	VIYEKTIRK	9	67	383.90430141395825	1148.6910748420748	3	383.9043273925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VIYEKTIRK_	ENSG00000124429|ENST00000262753|POF1B;nc|ENSG00000124429|Q8WVV4-1|POF1B;nc|ENSG00000124429|Q8WVV4-3|POF1B	56.72105179125745	0.24094814563026265	5				NaN	NaN	0	NaN	2054	3087	5142
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5144	19.152	NaN	1168	30	0	508.05	0.106			+	-1	SAEYNCITVE	10	32	395.8404541015625	NaN	0	395.8404541015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SAEYNC(Carbamidomethyl (C))ITVE_	REV__ENSG00000057757|ENST00000246151|PITHD1;REV__nc|ENSG00000057757|Q9GZP4-2|PITHD1	20.83715455343099	0.4201028297492154	5				NaN	NaN	0	NaN	2055	3087	5142
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5145	19.154	NaN	369.2	30	0	65.829	0.034			+	-1	KAIDYACQ	8	29	484.73040771484375	NaN	0	484.73040771484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_KAIDYAC(Carbamidomethyl (C))Q_	REV__ENSG00000108262|ENST00000225394|GIT1;REV__ENSG00000139436|ENST00000355312|GIT2;REV__ENST00000473217.5_1_17:27901722-27902547:-|nuORF;REV__ENST00000579937.5_1_17:27901722-27902151:-|nuORF;REV__nc|ENSG00000108262|Q9Y2X7-3|GIT1;REV__nc|ENSG00000139436|Q14161-10|GIT2;REV__nc|ENSG00000139436|Q14161-11|GIT2;REV__nc|ENSG00000139436|Q14161-3|GIT2;REV__nc|ENSG00000139436|Q14161-4|GIT2;REV__nc|ENSG00000139436|Q14161-5|GIT2;REV__nc|ENSG00000139436|Q14161-6|GIT2;REV__nc|ENSG00000139436|Q14161-7|GIT2;REV__nc|ENSG00000139436|Q14161-8|GIT2;REV__nc|ENSG00000139436|Q14161-9|GIT2	15.641811463095205	1.7418937515398478	5				NaN	NaN	0	NaN	2056	3087	5142
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5163	19.191	NaN	1352.6	30	0	185.71	0.214	+			18739	ITIDKATGK	9	52	473.78157935311907	NaN	0	473.78179931640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ITIDKATGK_	ENSG00000183207|ENST00000595090|RUVBL2;ENST00000594017.5_1_19:49497156-49513425:+|nuORF;ENST00000596247.5_1_19:49507512-49519096:+|nuORF;nc|ENSG00000183207|Q9Y230-2|RUVBL2	65.15724298150197	0.1273232316122292	5				NaN	NaN	0	NaN	2071	3090	5162
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5164	19.195	NaN	6436.3	30	0	1014.8	0.036	+			16450	HESRQITQV	9	67	549.2879925046349	1096.5614320760697	2	549.2901611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HESRQITQV_	ENSG00000104695|ENST00000221138|PPP2CB;ENSG00000113575|ENST00000481195|PPP2CA;ENSG00000119414|ENST00000373547|PPP6C;ENSG00000149923|ENST00000279387|PPP4C;ENST00000566749.5_1_16:30094185-30096380:+|nuORF;ENST00000567040.5_1_16:30087698-30094972:+|nuORF;nc|ENSG00000113575|P67775-2|PPP2CA;nc|ENSG00000119414|O00743-2|PPP6C;nc|ENSG00000119414|O00743-3|PPP6C	134.7655990226056	0.012935733000282069	5				NaN	NaN	0	NaN	2072	3090	5162
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5182	19.232	NaN	37267	30	0	10920	0.214	+			35614	SCCPVGCAK	9	74	462.689768655329	923.364984377458	2	462.69012451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SCC(Carbamidomethyl (C))PVGCAK_	CON__P67983;ENSG00000125144|ENST00000379811|MT1G;ENSG00000125148|ENST00000245185|MT2A;ENSG00000169688|ENST00000334346|MT1B;ENSG00000187193|ENST00000394485|MT1X;ENSG00000205364|ENST00000379818|MT1M;ENST00000330439.6_1_16:56660742-56660880:+|nuORF;ENST00000562017.1_1_16:56643131-56643263:+|nuORF;ENST00000563985.1_1_16:56642884-56643263:+|nuORF;ENST00000567300.1_1_16:56642646-56643263:+|nuORF;nc|ENSG00000125144|P13640-2|MT1G;nc|ENSG00000169715|P04732|MT1E	95.81516180277367	0.04847050768394289	5				NaN	NaN	0	NaN	2087	3093	5181
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5183	19.235	NaN	3134.2	30	0	1078.7	0.106				-1	TVMDKTRAL	9	52	525.7837497708247	1049.5529466084492	2	525.7847290039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_TVM(Oxidation (M))DKTRAL_	CARD17-CASP1|1|fusion;CARD17-CASP1|2|fusion;CASP1|p.N205Ifs*7|1|0.4|ENSG00000137752|chr11:105030343-105030343|T/-|frameshift_variant;ENSG00000137752|ENST00000533400|CASP1;ENSG00000204397|ENST00000673097|CARD16;ENST00000526511.5_1_11:104901858-104905840:-|nuORF;ENST00000527065.1_1_11:104915107-104915377:-|nuORF;nc|ENSG00000137752|P29466-2|CASP1;nc|ENSG00000204397|Q5EG05|CARD16	47.95952297671804	0.32689736945648856	5				NaN	NaN	0	NaN	2088	3093	5181
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5184	19.237	NaN	925.44	30	0	125.78	0.034	+			33048	REKEKTAL	8	42	487.7845458984375	NaN	0	487.7845458984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_REKEKTAL_	ENST00000361910.8_1_X:100871678-100872564:-|nuORF;ENST00000494624.1_1_X:100872426-100872564:-|nuORF;ENST00000539247.5_1_X:100872276-100872564:-|nuORF	29.14955571784316	1.7418937515398478	5				NaN	NaN	0	NaN	2089	3093	5181
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5200	19.27	NaN	32333	30	0	10696	0.215	+			49168	VVMRDPASK	9	73	501.77351144981134	1001.5324699664227	2	501.77349853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVMRDPASK_	ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1	155.5846463517096	0.005567437401040498	5				NaN	NaN	0	NaN	2102	3096	5199
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5201	19.274	NaN	2033.4	30	0	253.43	0.106			+	25733	LRSSLAQL	8	53	444.26885986328125	NaN	0	444.26885986328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LRSSLAQL_	REV__CNKSR1|p.H694Tfs*16|1|0.42|ENSG00000142675|chr1:26189460-26189460|C/-|frameshift_variant;REV__CNKSR1|p.P512Hfs*58|2|0.35|ENSG00000142675|chr1:26188287-26188287|C/-|frameshift_variant;REV__CNKSR1|p.P513Tfs*9|2|0.38|ENSG00000142675|chr1:26188286-26188287|-/C|frameshift_variant;REV__ENSG00000142675|ENST00000361530|CNKSR1;REV__ENST00000465415.1_1_1:26504038-26507409:+|nuORF;REV__nc|ENSG00000142675|Q969H4|CNKSR1	58.78195531508484	1.7418937515398478	5				NaN	NaN	0	NaN	2103	3096	5199
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5202	19.276	NaN	1557.6	30	0	514.62	0.106	+			48980	VVGGVLPNG	9	34	406.2370898776153	NaN	0	406.2373046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVGGVLPNG_	nc|ENSG00000240268|A6NHM9|MOXD2P	50.0245360154114	0.20652386741182333	5				NaN	NaN	0	NaN	2104	3096	5199
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5203	19.277	NaN	1616.2	30	0	241.01	0.106			+	17545	IDSTSALR	8	43	431.7348327636719	NaN	0	431.7348327636719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IDSTSALR_	REV__ENSG00000058272|ENST00000450142|PPP1R12A;REV__ENST00000550001.1_1_12:80201004-80203592:-|nuORF;REV__nc|ENSG00000058272|O14974-2|PPP1R12A;REV__nc|ENSG00000058272|O14974-3|PPP1R12A;REV__nc|ENSG00000058272|O14974-4|PPP1R12A;REV__nc|ENSG00000058272|O14974-5|PPP1R12A;REV__PPP1R12A|p.N540Ifs*23|1|0.49|ENSG00000058272|chr12:79807262-79807262|T/-|frameshift_variant	42.47446043378293	1.7418937515398478	5				NaN	NaN	0	NaN	2105	3096	5199
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5204	19.279	NaN	2905.2	30	0	479.71	0.037			+	48035	VSRSDTQKPD	10	50	378.1913146972656	NaN	0	378.1913146972656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSRSDTQKPD_	REV__ENST00000494921.1_1_20:18568716-18611186:+|nuORF	36.446750945000026	0.3805027428805705	5				NaN	NaN	0	NaN	2106	3096	5199
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5222	19.317	NaN	9803.4	30	0	1996	0.214				-1	 	0	66	479.763485688616	957.512418444032	2	479.7643127441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2121	3099	5221
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5223	19.32	NaN	941.62	30	0	118.44	0.034			+	6964	CPQAWGRR	8	45	487.2417907714844	NaN	0	487.2417907714844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_CPQAWGRR_	REV__ENST00000372564.7_1_9:131770823-131770958:-|nuORF	26.79610172149135	1.7418937515398478	5				NaN	NaN	0	NaN	2122	3099	5221
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5239	19.353	NaN	29309	30	0	3740.9	0.214	+			34580	RVMKALVNR	9	87	362.8901561713044	1085.6486391141132	3	362.8902587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVMKALVNR_	ENSG00000149136|ENST00000278412|SSRP1;ENST00000293880.9_1_11:57098199-57100416:-|nuORF	109.47833844074708	0.029530294723441826	5				NaN	NaN	0	NaN	2135	3102	5238
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5240	19.357	NaN	3275.7	30	0	309.16	0.106	+			986	AEKGKPVTL	9	58	471.78437285140365	941.5541927696073	2	471.7843322753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEKGKPVTL_	ENSG00000106258|ENST00000222982|CYP3A5	85.86182877749512	0.07653218437724067	5				NaN	NaN	0	NaN	2136	3102	5238
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5241	19.359	NaN	5875.4	30	0	3165.3	0.038	+			48832	VVATMRDLGKK	11	43	406.57231255403514	1216.6951082623054	3	406.5721435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVATMRDLGKK_	ENSG00000080511|ENST00000591589|RDH8	35.17822180527639	0.6208003396870814	5				NaN	NaN	0	NaN	2137	3102	5238
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5259	19.396	NaN	5986	30	0	1333	0.214	+			5414	ATYHGSFSTK	10	71	549.7647311921572	NaN	0	549.7647705078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATYHGSFSTK_	ENSG00000163359|ENST00000295550|COL6A3;ENST00000491769.1_1_2:238233419-238250825:-|nuORF;ENST00000493608.1_1_2:238242084-238243404:-|nuORF;nc|ENSG00000163359|P12111-2|COL6A3;nc|ENSG00000163359|P12111-4|COL6A3	97.59673978297657	0.025134704960798615	5				NaN	NaN	0	NaN	2152	3105	5258
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5260	19.4	NaN	3142	30	0	686.09	0.106	+			5012	ATSAVTVTR	9	47	453.2558421587309	904.4971313842618	2	453.25592041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATSAVTVTR_	ENSG00000123444|ENST00000430070|KBTBD4;nc|ENSG00000123444|Q9NVX7-1|KBTBD4;nc|ENSG00000123444|Q9NVX7-3|KBTBD4	104.0567914643314	0.03506238181059741	5				NaN	NaN	0	NaN	2153	3105	5258
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5261	19.402	NaN	3243.4	30	0	645.95	0.106	+			16490	HETSKMKVL	9	61	536.7947160472276	NaN	0	536.7947387695312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HETSKMKVL_	ENSG00000067445|ENST00000173898|TRO;ENSG00000179222|ENST00000326587|MAGED1;ENST00000475183.1_1_X:54953428-54957230:+|nuORF;ENST00000492706.5_1_X:54953428-54957450:+|nuORF;ENST00000494718.5_1_X:51643260-51645023:+|nuORF;nc|ENSG00000067445|Q12816-2|TRO;nc|ENSG00000067445|Q12816-3|TRO;nc|ENSG00000067445|Q12816-4|TRO;nc|ENSG00000067445|Q12816-5|TRO;nc|ENSG00000179222|Q9Y5V3-2|MAGED1;TRO|p.S1034Rfs*10|1|0.07|ENSG00000067445|chrX:54929826-54929826|C/-|frameshift_variant	87.69643885390035	0.04624013146650493	5				NaN	NaN	0	NaN	2154	3105	5258
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5262	19.403	NaN	1812.5	30	0	669.83	0.106	+			30299	PTLGARARVGG	11	31	352.207275390625	NaN	0	352.207275390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PTLGARARVGG_	ENSG00000105227|ENST00000324001|PRX;ENST00000291825.11_2_19:40899875-40904000:-|nuORF;nc|ENSG00000105227|Q9BXM0-3|PRX	26.063383197487333	0.44926255568796863	5				NaN	NaN	0	NaN	2155	3105	5258
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5263	19.405	NaN	1862.5	30	0	419.15	0.106			+	5227	ATVAAGVPV	9	46	392.73174988131177	NaN	0	392.7313537597656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATVAAGVPV_	REV__ENSG00000116809|ENST00000375743|ZBTB17;REV__nc|ENSG00000116809|Q13105-2|ZBTB17;REV__nc|ENSG00000116809|Q13105-3|ZBTB17	44.53106598305862	0.24438232876904814	5				NaN	NaN	0	NaN	2156	3105	5258
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5264	19.407	NaN	1705	30	0	288.22	0.037			+	-1	LSCFVLGTLL	10	33	374.8802490234375	NaN	0	374.8802490234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_LSC(Carbamidomethyl (C))FVLGTLL_	REV__ENSG00000134339|ENST00000256733|SAA2;REV__ENSG00000173432|ENST00000356524|SAA1;REV__nc|ENSG00000134339|P0DJI9-2|SAA2	21.68575002086885	0.4201028297492154	5				NaN	NaN	0	NaN	2157	3105	5258
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5265	19.408	NaN	725.79	30	0	63.68	0.14			+	10973	FEATLEAGDG	10	39	505.22548265140045	1008.4364123696009	2	504.771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FEATLEAGDG_	REV__ENSG00000247596|ENST00000305533|TWF2	27.882242232435846	0.6521336255503853	5				NaN	NaN	0	NaN	2158	3105	5258
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5283	19.447	NaN	2293.7	30	0	178.23	0.214	+			34960	SAAKSLLNK	9	51	466.2825329863776	930.5505130395552	2	466.2821350097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAAKSLLNK_	ENST00000474131.5_1_10:75577276-75601951:-|nuORF;ENST00000492020.5_1_10:75597207-75607060:-|nuORF;nc|ENSG00000058404|Q13554-3|CAMK2B;nc|ENSG00000058404|Q13554-4|CAMK2B;nc|ENSG00000058404|Q13554-5|CAMK2B;nc|ENSG00000148660|Q13555-10|CAMK2G;nc|ENSG00000148660|Q13555-2|CAMK2G;nc|ENSG00000148660|Q13555-3|CAMK2G;nc|ENSG00000148660|Q13555-4|CAMK2G;nc|ENSG00000148660|Q13555-7|CAMK2G;nc|ENSG00000148660|Q13555-8|CAMK2G;nc|ENSG00000148660|Q13555-9|CAMK2G;nc|ENSG00000148660|Q13555|CAMK2G	58.2462437865262	0.22823408064396822	5				NaN	NaN	0	NaN	2173	3108	5282
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5284	19.451	NaN	3929.2	30	0	531.47	0.106	+			43098	TEPSQLLKS	9	57	501.7788108281171	1001.5430687230343	2	501.7790222167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEPSQLLKS_	JUP|p.A117T|1|0.67|ENSG00000173801|chr17:41769537-41769537|C/T|missense_variant	56.72105179125745	0.24094814563026265	5				NaN	NaN	0	NaN	2174	3108	5282
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5285	19.453	NaN	6838.9	30	0	1196.3	0.033	+			38452	SSAPPLTGK	9	57	429.2399222503028	856.4652915674056	2	429.2397155761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSAPPLTGK_	ENSG00000100105|ENST00000266269|PATZ1;nc|ENSG00000100105|Q9HBE1-2|PATZ1;nc|ENSG00000100105|Q9HBE1-3|PATZ1;nc|ENSG00000100105|Q9HBE1-4|PATZ1;PATZ1|p.G285Pfs*14|1|0.11|ENSG00000100105|chr22:31344749-31344750|CC/-|frameshift_variant	65.46538089061403	0.16805504838372562	5				NaN	NaN	0	NaN	2175	3108	5282
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5303	19.489	NaN	12373	30	0	3877.3	0.214	+			48913	VVDNGSGMCK	10	67	505.22548265140045	1008.4364123696009	2	505.225830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVDNGSGMCK_	ACTBL2|p.R29Gfs*7|1|0.37|ENSG00000169067|chr5:57482623-57482623|G/-|frameshift_variant;ENSG00000075624|ENST00000646664|ACTB;ENSG00000169067|ENST00000423391|ACTBL2;ENST00000418351.1_1_15:44282253-44282364:-|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000477812.1_1_7:5569027-5569288:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF	122.93914200107957	0.02317863035582428	5				NaN	NaN	0	NaN	2190	3111	5302
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5304	19.493	NaN	1419.2	30	0	709.88	0.106			+	-1	LYMGLYPVCPP	11	36	437.2159444028476	NaN	0	437.2158203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LYMGLYPVC(Carbamidomethyl (C))PP_	REV__ENSG00000058335|ENST00000558480|RASGRF1;REV__nc|ENSG00000058335|Q13972-2|RASGRF1;REV__nc|ENSG00000058335|Q13972|RASGRF1	27.047317107675042	0.44487757903053116	5				NaN	NaN	0	NaN	2191	3111	5302
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5305	19.495	NaN	645.72	30	0	91.359	0.035				-1	FKGWMSVPG	9	42	512.7515258789062	NaN	0	512.7515258789062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_FKGWM(Oxidation (M))SVPG_	ENSG00000130052|ENST00000374599|STARD8;nc|ENSG00000130052|Q92502|STARD8;STARD8|p.A874Sfs*16|1|0.42|ENSG00000130052|chrX:68723677-68723678|-/C|frameshift_variant;STARD8|p.L976Afs*8|1|0.27|ENSG00000130052|chrX:68724090-68724091|-/G|frameshift_variant	30.503639358989545	0.3235605894931338	5				NaN	NaN	0	NaN	2192	3111	5302
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5323	19.532	NaN	3316.4	30	0	459.24	0.214	+			26546	LTSDNKVIE	9	67	509.7744755336686	1017.5343981341372	2	509.7746887207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LTSDNKVIE_	LRPPRC|p.E1207D|1|0.04|ENSG00000138095|chr2:43899554-43899554|C/A|missense_variant	79.71258880314673	0.09879134589249085	5				NaN	NaN	0	NaN	2207	3114	5322
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5324	19.536	NaN	5504.4	30	0	1709.6	0.106	+			40417	STVGTSNLK	9	46	453.7481215676487	905.4816902020974	2	453.74786376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STVGTSNLK_	ENSG00000135111|ENST00000349155|TBX3;nc|ENSG00000135111|O15119-3|TBX3;nc|ENSG00000135111|O15119|TBX3;TBX3|p.K714Rfs*15|1|0.12|ENSG00000135111|chr12:114671931-114671932|TT/-|frameshift_variant;TBX3|p.S443Afs*194|1|1.0|ENSG00000135111|chr12:114674609-114674610|-/ATGGTGGCGGGGCT|frameshift_variant	127.46168284122857	0.016682644177004526	5				NaN	NaN	0	NaN	2208	3114	5322
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5325	19.538	NaN	876.89	30	0	80.896	0.033			+	47524	VQPPHGLP	8	40	422.73883056640625	NaN	0	422.73883056640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VQPPHGLP_	REV__ENST00000478150.1_1_16:31045126-31045651:+|nuORF;REV__ENST00000565483.1_1_16:31045337-31045892:+|nuORF;REV__nc|ENSG00000103496|Q12846-2|STX4	37.028477286268924	1.7418937515398478	5				NaN	NaN	0	NaN	2209	3114	5322
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5340	19.57	NaN	1287.4	30	0	424	0.215	+			5298	ATVKEQIVK	9	46	508.31121826171875	NaN	0	508.31121826171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATVKEQIVK_	ENSG00000133103|ENST00000455146|COG6	56.632244143249146	0.1636824227100298	5				NaN	NaN	0	NaN	2221	3117	5339
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5341	19.573	NaN	1693.4	30	0	555.56	0.106	+			35615	SCCPVGCAK	9	40	462.689768655329	923.364984377458	2	462.69012451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SCC(Carbamidomethyl (C))PVGCAK_	CON__P67983;ENSG00000125144|ENST00000379811|MT1G;ENSG00000125148|ENST00000245185|MT2A;ENSG00000169688|ENST00000334346|MT1B;ENSG00000187193|ENST00000394485|MT1X;ENSG00000205364|ENST00000379818|MT1M;ENST00000330439.6_1_16:56660742-56660880:+|nuORF;ENST00000562017.1_1_16:56643131-56643263:+|nuORF;ENST00000563985.1_1_16:56642884-56643263:+|nuORF;ENST00000567300.1_1_16:56642646-56643263:+|nuORF;nc|ENSG00000125144|P13640-2|MT1G;nc|ENSG00000169715|P04732|MT1E	74.25504064058377	0.12238981753128622	5				NaN	NaN	0	NaN	2222	3117	5339
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5342	19.575	NaN	1193.1	30	0	125.51	0.106	+			13	AAAAVAGVPV	10	41	413.24514097256565	NaN	0	413.24517822265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AAAAVAGVPV_	sp|F5HFA5|UL117_HCMVMProteinUL117OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL117PE=3SV=1;sp|P16770|UL117_HCMVAProteinUL117OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL117PE=3SV=1	54.76467175910256	0.2754795324328683	5				NaN	NaN	0	NaN	2223	3117	5339
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5343	19.577	NaN	927.09	30	0	90.776	0.034			+	23060	KVTGKVADL	9	39	465.78466796875	NaN	0	465.78466796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KVTGKVADL_	REV__ENSG00000088836|ENST00000642402|SLC4A11;REV__nc|ENSG00000088836|Q8NBS3-1|SLC4A11;REV__nc|ENSG00000088836|Q8NBS3-2|SLC4A11;REV__nc|ENSG00000088836|Q8NBS3-4|SLC4A11;REV__nc|ENSG00000088836|Q8NBS3-5|SLC4A11	29.170058357718403	0.3302935627494407	5				NaN	NaN	0	NaN	2224	3117	5339
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5361	19.614	NaN	9136.6	30	0	3945.6	0.214	+			48888	VVDENAVAK	9	62	472.7561169042124	943.4976808752248	2	472.75640869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVDENAVAK_	ADH1B|p.A318Lfs*29|1|0.06|ENSG00000196616|chr4:99311533-99311533|C/-|frameshift_variant;ENSG00000187758|ENST00000209668|ADH1A;ENSG00000196616|ENST00000305046|ADH1B;ENSG00000248144|ENST00000515683|ADH1C;nc|ENSG00000196616|P00325-2|ADH1B	123.20810148215591	0.019257656778428764	5				NaN	NaN	0	NaN	2239	3120	5360
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5362	19.618	NaN	1212.7	30	0	247.84	0.106			+	-1	MWRRWMMCRDL	11	32	547.9134521484375	NaN	0	547.9134521484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))M(Oxidation (M))WRRWMMCRDL_	REV__ENST00000393104.6_1_10:112641263-112642826:+|nuORF	3.61906645146314	0.456735970842152	5				NaN	NaN	0	NaN	2240	3120	5360
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5363	19.62	NaN	1911.8	30	0	270.49	0.034	+			22151	KSRDTALK	8	54	459.7721135745219	NaN	0	459.7722473144531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KSRDTALK_	BLM|p.G1220Pfs*25|1|0.09|ENSG00000197299|chr15:90804264-90804265|-/ACCTTTA|frameshift_variant;BLM|p.K1217Nfs*62|2|0.42|ENSG00000197299|chr15:90804254-90804254|A/-|frameshift_variant;BLM|p.N515Mfs*16|2|0.38|ENSG00000197299|chr15:90760909-90760909|A/-|frameshift_variant;ENSG00000197299|ENST00000355112|BLM	64.20726635412375	1.7418937515398478	5				NaN	NaN	0	NaN	2241	3120	5360
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5379	19.653	NaN	15633	30	0	8996.3	0.214	+			41765	SVSNMVHTAK	10	52	358.5183869930124	1072.5333315792373	3	358.518310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSNMVHTAK_	ENSG00000115839|ENST00000264158|RAB3GAP1;nc|ENSG00000115839|Q15042-3|RAB3GAP1;nc|ENSG00000115839|Q15042-4|RAB3GAP1	34.08650109265054	0.601467140718965	5				NaN	NaN	0	NaN	2254	3123	5378
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5380	19.657	NaN	2125.6	30	0	595	0.106	+			4321	ATGKVMVMK	9	44	482.76918813623854	963.5238233392771	2	482.7690734863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATGKVMVMK_	ENSG00000182541|ENST00000331728|LIMK2;LIMK2|p.G411Afs*3|1|0.4|ENSG00000182541|chr22:31267874-31267874|G/-|frameshift_variant;LIMK2|p.K351T|1|0.32|ENSG00000182541|chr22:31266994-31266994|A/C|missense_variant;nc|ENSG00000182541|P53671-2|LIMK2;nc|ENSG00000182541|P53671-3|LIMK2	53.08895987439943	0.27122541748218487	5				NaN	NaN	0	NaN	2255	3123	5378
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5381	19.659	NaN	1357.9	30	0	316.54	0.106	+			37851	SNMVHTAK	8	45	444.2236633300781	NaN	0	444.2236633300781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SNMVHTAK_	ENSG00000115839|ENST00000264158|RAB3GAP1;nc|ENSG00000115839|Q15042-3|RAB3GAP1;nc|ENSG00000115839|Q15042-4|RAB3GAP1	66.96192283764107	1.7418937515398478	5				NaN	NaN	0	NaN	2256	3123	5378
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5382	19.661	NaN	1027.8	30	0	146.03	0.106			+	-1	WFDWTRSCRCR	11	29	543.9094848632812	NaN	0	543.9094848632812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_WFDWTRSC(Carbamidomethyl (C))RC(Carbamidomethyl (C))R_	REV__ENST00000358220.5_1_10:1176693-1176822:+|nuORF	3.61906645146314	0.456735970842152	5				NaN	NaN	0	NaN	2257	3123	5378
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5383	19.662	NaN	3128.9	30	0	1080.4	0.035	+			1602	AGLLAGDRLV	10	58	492.79570009063536	983.5768472480707	2	492.79498291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AGLLAGDRLV_	ENSG00000109062|ENST00000262613|NHERF1	87.75429964447693	0.1439309699732727	5				NaN	NaN	0	NaN	2258	3123	5378
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5401	19.699	NaN	3905.4	30	0	512.66	0.214	+			38965	SSRGPLPVK	9	56	470.78251258450763	939.5504722358153	2	470.78271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSRGPLPVK_	ENSG00000147274|ENST00000320676|RBMX;ENSG00000213516|ENST00000652648|RBMXL1;nc|ENSG00000147274|P38159-2|RBMX	42.86426827375447	0.38666266728046506	5				NaN	NaN	0	NaN	2273	3126	5400
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5402	19.703	NaN	4000	30	0	1148.2	0.106	+			14837	GTLLYQLGILK	11	50	406.9215475633511	NaN	0	406.9217224121094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTLLYQLGILK_	ENSG00000126773|ENST00000406854|PCNX4	45.908116695636124	0.34470816508309304	5				NaN	NaN	0	NaN	2274	3126	5400
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5403	19.705	NaN	5815.7	30	0	945.87	0.106	+			42920	TEIEKARAV	9	68	508.7910601335018	1015.5675673338036	2	508.791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TEIEKARAV_	ENSG00000148843|ENST00000369797|PDCD11	120.30596017624542	0.02101454110788768	5				NaN	NaN	0	NaN	2275	3126	5400
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5404	19.707	NaN	2123.3	30	0	827.46	0.036	+			16810	HPDKKIVAY	9	51	535.803180967962	1069.591809002724	2	535.8040161132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HPDKKIVAY_	ATXN10|p.F455Lfs*10|1|0.3|ENSG00000130638|chr22:45843115-45843115|T/-|frameshift_variant;ENSG00000130638|ENST00000252934|ATXN10;nc|ENSG00000130638|Q9UBB4-2|ATXN10	77.31757898189308	0.1091473830098891	5				NaN	NaN	0	NaN	2276	3126	5400
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5421	19.741	NaN	2788.2	30	0	601.82	0.214	+			19773	KEAETRAEF	9	55	540.7696773728347	1079.5248018124694	2	540.7703247070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEAETRAEF_	CON__Q3SX28;ENSG00000140416|ENST00000403994|TPM1;ENSG00000143549|ENST00000651641|TPM3;ENSG00000167460|ENST00000643579|TPM4;ENSG00000198467|ENST00000645482|TPM2;ENST00000368528.3_1_3:27674554-27675208:+|nuORF;ENST00000397772.2_1_20:32500135-32500381:-|nuORF;ENST00000469717.5_1_1:154130117-154143232:-|nuORF;ENST00000520239.1_1_8:70042334-70042577:+|nuORF;ENST00000558264.5_1_15:63353458-63363368:+|nuORF;ENST00000559108.1_1_15:63354467-63358183:+|nuORF;nc|ENSG00000140416|P09493-10|TPM1;nc|ENSG00000140416|P09493-2|TPM1;nc|ENSG00000140416|P09493-3|TPM1;nc|ENSG00000140416|P09493-4|TPM1;nc|ENSG00000140416|P09493-5|TPM1;nc|ENSG00000140416|P09493-6|TPM1;nc|ENSG00000140416|P09493-7|TPM1;nc|ENSG00000140416|P09493-8|TPM1;nc|ENSG00000140416|P09493-9|TPM1;nc|ENSG00000143549|P06753-2|TPM3;nc|ENSG00000143549|P06753-3|TPM3;nc|ENSG00000143549|P06753-4|TPM3;nc|ENSG00000143549|P06753-5|TPM3;nc|ENSG00000143549|P06753-6|TPM3;nc|ENSG00000143549|P06753-7|TPM3;nc|ENSG00000167460|P67936-2|TPM4;nc|ENSG00000198467|P07951-2|TPM2;nc|ENSG00000198467|P07951-3|TPM2;TPM3|p.A243T|1|0.29|ENSG00000143549|chr1:154170448-154170448|C/T|missense_variant	68.84614121027924	0.14577793175421136	5				NaN	NaN	0	NaN	2290	3129	5420
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5422	19.745	NaN	1122.4	30	0	343.34	0.034	+			4325	ATGKWTKE	8	43	460.74742381807783	919.4802947029557	2	460.74713134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATGKWTKE_	ENSG00000011376|ENST00000645846|LARS2;LARS2|p.M583Wfs*51|2|0.31|ENSG00000011376|chr3:45500561-45500561|A/-|frameshift_variant	32.81241826257853	0.7059802730411993	5				NaN	NaN	0	NaN	2291	3129	5420
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5438	19.778	NaN	7940.1	30	0	2796.1	0.214	+			44651	TTGAVLGQK	9	62	437.7532890106204	873.4920250880408	2	437.7533264160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTGAVLGQK_	chr3:58640177-58645509|101|32.06|0.87|5.2|-|2|FAM3D,FAM3D|2;ENSG00000198643|ENST00000358781|FAM3D;FAM3D|p.G139Vfs*16|1|0.28|ENSG00000198643|chr3:58637183-58637183|C/-|frameshift_variant	122.1759843771914	0.019882474861609503	5				NaN	NaN	0	NaN	2304	3132	5437
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5439	19.781	NaN	5396.8	30	0	383.95	0.106	+			12393	GEAAKSVKL	9	61	451.7688328002631	901.5231126673262	2	451.7683410644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEAAKSVKL_	ENSG00000189334|ENST00000344616|S100A14	76.16968421966216	0.11411088698345859	5				NaN	NaN	0	NaN	2305	3132	5437
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5440	19.783	NaN	1486.1	30	0	147.99	0.034			+	22014	KSGNGYTQS	9	50	471.22066155643483	940.4267701796697	2	471.2218933105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KSGNGYTQS_	REV__ENSG00000135506|ENST00000315970|OS9;REV__ENST00000549307.5_1_12:58089922-58109758:+|nuORF;REV__ENST00000552787.5_1_12:58089581-58109758:+|nuORF;REV__nc|ENSG00000135506|Q13438-2|OS9;REV__nc|ENSG00000135506|Q13438-3|OS9;REV__nc|ENSG00000135506|Q13438-4|OS9;REV__nc|ENSG00000135506|Q13438-7|OS9;REV__nc|ENSG00000135506|Q13438-8|OS9	41.42661286455405	0.403525789677298	5				NaN	NaN	0	NaN	2306	3132	5437
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5458	19.821	NaN	5344.6	30	0	1874	0.214	+			4966	ATQTSVVVK	9	51	466.77467547930604	931.5347980254121	2	466.7744445800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATQTSVVVK_	ENSG00000158636|ENST00000695367|EMSY;ENST00000531641.1_1_11:76237526-76255878:+|nuORF;nc|ENSG00000158636|Q7Z589-2|EMSY;nc|ENSG00000158636|Q7Z589-4|EMSY;nc|ENSG00000158636|Q7Z589-5|EMSY;nc|ENSG00000158636|Q7Z589-6|EMSY;nc|ENSG00000158636|Q7Z589|EMSY	109.47833844074708	0.029530294723441826	5				NaN	NaN	0	NaN	2321	3135	5457
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5459	19.824	NaN	10499	30	0	8070.6	0.106				-1	KTFAMKILK	9	29	365.8924815195583	1094.655615158875	3	365.8927001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_KTFAM(Oxidation (M))KILK_	ENSG00000185532|ENST00000373980|PRKG1;ENST00000373975.2_1_10:53822369-54053657:+|nuORF;nc|ENSG00000185532|Q13976-3|PRKG1;nc|ENSG00000185532|Q13976|PRKG1	25.57405402267927	0.5642445186134241	5				NaN	NaN	0	NaN	2322	3135	5457
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5460	19.826	NaN	4133	30	0	1793.5	0.106	+			49012	VVGPVGAGK	9	40	392.2399158029818	782.4652786727636	2	392.23980712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVGPVGAGK_	ABCC4|p.L883Wfs*7|2|0.22|ENSG00000125257|chr13:95083178-95083178|A/-|frameshift_variant;ABCC4|p.T775Rfs*21|1|0.09|ENSG00000125257|chr13:95161322-95161323|-/AGTATGTCTT|frameshift_variant;ABCC6|p.L780Wfs*31|1|0.44|ENSG00000091262|chr16:16178875-16178875|G/-|frameshift_variant;ENSG00000091262|ENST00000205557|ABCC6;ENSG00000125257|ENST00000645237|ABCC4;nc|ENSG00000091262|O95255-3|ABCC6;nc|ENSG00000125257|O15439-2|ABCC4;nc|ENSG00000125257|O15439-3|ABCC4;nc|ENSG00000125257|O15439-4|ABCC4	50.0245360154114	0.3026755932229825	5				NaN	NaN	0	NaN	2323	3135	5457
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5461	19.828	NaN	4987.3	30	0	2626.2	0.106			+	12	AAAATAAPGP	10	36	399.21138399650096	796.4082150598019	2	399.21148681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AAAATAAPGP_	REV__ENSG00000163497|ENST00000295727|FEV	35.61828744233558	0.588957954432594	5				NaN	NaN	0	NaN	2324	3135	5457
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5462	19.83	NaN	1331.5	30	0	201.38	0.106			+	5045	ATSGLKIAE	9	49	445.2541809082031	NaN	0	445.2541809082031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATSGLKIAE_	REV__ENSG00000143106|ENST00000271308|PSMA5;REV__ENST00000484563.1_1_1:109955653-109968973:-|nuORF	27.882242232435846	0.3367954786602879	5				NaN	NaN	0	NaN	2325	3135	5457
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5463	19.832	NaN	1035.6	30	0	502.28	0.036			+	1758	AIALITLIVM	10	21	353.2290344238281	NaN	0	353.2290344238281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AIALITLIVM_	REV__ENSG00000120440|ENST00000239587|TTLL2;REV__TTLL2|p.A427*|1|0.08|ENSG00000120440|chr6:167341177-167341178|-/AT|frameshift_variant;REV__TTLL2|p.R425Efs*52|1|0.44|ENSG00000120440|chr6:167341173-167341173|A/-|frameshift_variant	18.262085536374414	0.4201028297492154	5				NaN	NaN	0	NaN	2326	3135	5457
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5464	19.832	NaN	1212.6	30	0	233.83	0.138	+			38652	SSIGPGLNL	9	47	429.2399222503028	856.4652915674056	2	429.2400207519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSIGPGLNL_	ENST00000426861.5_1_17:56598198-56599363:-|nuORF;ENST00000577440.5_1_17:56598198-56609324:-|nuORF;ENST00000584488.5_1_17:56598198-56606616:-|nuORF	60.97194046774394	0.20551255781574032	5				NaN	NaN	0	NaN	2327	3135	5457
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5481	19.869	NaN	11078	30	0	5876.2	0.215			+	34658	RVRFLLRAG	9	51	363.2325675640035	1086.6758732922106	3	363.2326965332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVRFLLRAG_	REV__ENSG00000134571|ENST00000545968|MYBPC3;REV__nc|ENSG00000134571|Q14896-2|MYBPC3	57.81127852772723	0.2318599694398087	5				NaN	NaN	0	NaN	2341	3138	5480
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5482	19.873	NaN	1458.9	30	0	259.41	0.106	+			3355	ASNFKSPVK	9	48	489.2744417436497	976.5343305540994	2	489.27471923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASNFKSPVK_	ENSG00000204435|ENST00000375882|CSNK2B	51.52775601994872	0.28504342437107444	5				NaN	NaN	0	NaN	2342	3138	5480
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5483	19.875	NaN	1984.1	30	0	195.65	0.106	+			15939	HAFESSQKY	9	62	548.7563595759426	1095.4981662186851	2	548.757080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HAFESSQKY_	ENSG00000100027|ENST00000339468|YPEL1;ENSG00000175155|ENST00000312655|YPEL2;ENST00000477675.1_1_22:22055420-22058252:-|nuORF;YPEL1|p.E102A|1|0.07|ENSG00000100027|chr22:21701184-21701184|T/G|missense_variant	101.60071028292904	0.0375685401170269	5				NaN	NaN	0	NaN	2343	3138	5480
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5484	19.877	NaN	1297.7	30	0	169.73	0.106	+			10012	ERRGLKRS	8	53	501.300537109375	NaN	0	501.300537109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ERRGLKRS_	ENSG00000112658|ENST00000265354|SRF	31.954861631926434	1.7418937515398478	5				NaN	NaN	0	NaN	2344	3138	5480
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5485	19.878	NaN	1045	30	0	448.87	0.037				-1	ATRASPGCARG	11	36	368.5175476074219	NaN	0	368.5175476074219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_ATRASPGC(Carbamidomethyl (C))ARG_	ENST00000230053.10_1_6:71571672-71665663:-|nuORF	27.64392233501311	0.4422187622456888	5				NaN	NaN	0	NaN	2345	3138	5480
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5503	19.916	NaN	9710.1	30	0	3005.2	0.214	+			39602	STHGTFLNK	9	62	502.7616330395543	1003.5087131459086	2	502.7618713378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STHGTFLNK_	ENSG00000163798|ENST00000326019|SLC4A1AP;nc|ENSG00000163798|Q9BWU0-1|SLC4A1AP;SLC4A1AP|p.F378Lfs*8|1|0.18|ENSG00000163798|chr2:27667375-27667375|T/-|frameshift_variant;SLC4A1AP|p.L669Tfs*8|1|0.38|ENSG00000163798|chr2:27685159-27685160|-/A|frameshift_variant	145.15565482312357	0.00806134135205793	5				NaN	NaN	0	NaN	2360	3141	5502
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5504	19.92	NaN	487.29	30	0	106.42	0.106			+	11192	FHFDVSGMTS	10	17	564.244384765625	NaN	0	564.244384765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FHFDVSGMTS_	REV__ENST00000497424.5_1_20:3903962-3904037:+|nuORF	16.473147378115264	0.4201028297492154	5				NaN	NaN	0	NaN	2361	3141	5502
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5505	19.922	NaN	1071.5	30	0	230.64	0.033	+			7687	DLHSVLAQ	8	33	441.73751590966657	881.4604788861332	2	441.73858642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DLHSVLAQ_	ATG16L1|p.I471Cfs*34|1|0.04|ENSG00000085978|chr2:233290333-233290334|-/TGCAAAC|frameshift_variant;ENSG00000085978|ENST00000392017|ATG16L1;ENST00000474148.5_1_2:234160473-234181699:+|nuORF;ENST00000479942.5_1_2:234160473-234198706:+|nuORF;ENST00000485623.5_1_2:234160473-234172712:+|nuORF;nc|ENSG00000085978|Q676U5-2|ATG16L1;nc|ENSG00000085978|Q676U5-3|ATG16L1;nc|ENSG00000085978|Q676U5-4|ATG16L1;nc|ENSG00000085978|Q676U5-5|ATG16L1	26.79610172149135	0.7524337208463756	5				NaN	NaN	0	NaN	2362	3141	5502
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5523	19.959	NaN	21421	30	0	2841.5	0.213				-1	 	0	77	610.2734008477615	1827.7983731434845	3	610.2738037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2377	3144	5522
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5524	19.963	NaN	2779.8	30	0	489.98	0.106			+	37395	SLGAKTASY	9	46	449.23708476095345	896.4596165887069	2	449.23724365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLGAKTASY_	REV__tr|U7SV20|U7SV20_FUSNU3-oxoacyl-[acyl-carrierprotein]reductaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01097PE=3SV=1	68.78682469695295	0.14603441672067394	5				NaN	NaN	0	NaN	2378	3144	5522
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5525	19.965	NaN	11245	30	0	2573.8	0.106	+			39835	STLKSIMKK	9	67	345.8791381158794	1034.6155849478382	3	345.879150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STLKSIMKK_	ENSG00000107104|ENST00000382297|KANK1;ENST00000354485.5_1_9:730997-731267:+|nuORF;ENST00000489369.5_1_9:676972-732786:+|nuORF;nc|ENSG00000107104|Q14678-2|KANK1	93.5975768576971	0.05472259948179787	5				NaN	NaN	0	NaN	2379	3144	5522
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5526	19.966	NaN	3329.7	30	0	466.52	0.106			+	1646	AGPLAPKGP	9	58	404.23974872629714	806.4649445193943	2	404.2397766113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AGPLAPKGP_	REV__ENSG00000141858|ENST00000533683|SAMD1;REV__nc|ENSG00000141858|Q6SPF0|SAMD1	40.5726180659479	0.4135428067754104	5				NaN	NaN	0	NaN	2380	3144	5522
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5527	19.968	NaN	2595.2	30	0	626.48	0.106	+			47016	VLAAAVGGPD	10	53	435.2399663220219	NaN	0	435.2398681640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VLAAAVGGPD_	ENST00000547739.1_1_12:100967536-100972460:+|nuORF	38.80614096846853	0.372755673314885	5				NaN	NaN	0	NaN	2381	3144	5522
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5528	19.97	NaN	2085.8	30	0	433.03	0.037	+			18248	IPAHCKVLIK	10	48	374.566686283875	NaN	0	374.2326354980469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IPAHCKVLIK_	ENSG00000113555|ENST00000231484|PCDH12;PCDH12|p.L685Yfs*7|3|0.18|ENSG00000113555|chr5:141955800-141955800|G/-|frameshift_variant	21.68575002086885	0.4201028297492154	5				NaN	NaN	0	NaN	2382	3144	5522
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5546	20.007	NaN	9948.6	30	0	3863.3	0.214	+			3944	ATATELTTK	9	64	468.2557475410566	934.4969421489133	2	468.25531005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATATELTTK_	ENSG00000133606|ENST00000255977|MKRN1;ENST00000475010.5_1_7:140155450-140179030:-|nuORF;nc|ENSG00000133606|Q9UHC7-2|MKRN1;nc|ENSG00000133606|Q9UHC7-3|MKRN1;nc|ENSG00000133606|Q9UHC7-4|MKRN1;nc|ENSG00000238222|Q13434|MKRN4P	146.78539889680295	0.007618400906539062	5				NaN	NaN	0	NaN	2397	3147	5545
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5547	20.011	NaN	6903.2	30	0	1196.5	0.106	+			27634	MPQGGGQHY	9	60	487.7107664303879	973.4069799275758	2	487.71112060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MPQGGGQHY_	ENSG00000141380|ENST00000415083|SS18;nc|ENSG00000141380|Q15532-2|SS18	102.7733458925114	0.03637199559902695	5				NaN	NaN	0	NaN	2398	3147	5545
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5548	20.013	NaN	734.44	30	0	100.22	0.034			+	35635	SCGMWQVN	8	37	462.689768655329	923.364984377458	2	462.690185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SCGMWQVN_	REV__ENSG00000112242|ENST00000346618|E2F3;REV__nc|ENSG00000112242|O00716-2|E2F3	38.80614096846853	0.6637206697844082	5				NaN	NaN	0	NaN	2399	3147	5545
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5581	20.084	NaN	3037.9	30	0	890.03	0.214	+			38606	SSGPSTPLK	9	57	437.23729453173655	872.4600361302731	2	437.2373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSGPSTPLK_	C2CD5|p.D676Mfs*40|1|0.33|ENSG00000111731|chr12:22474769-22474769|T/-|frameshift_variant;C2CD5|p.F331Lfs*5|1|0.32|ENSG00000111731|chr12:22513345-22513345|C/-|frameshift_variant;ENSG00000111731|ENST00000446597|C2CD5;nc|ENSG00000111731|Q86YS7|C2CD5	101.25262130126117	0.03792372629710479	5				NaN	NaN	0	NaN	2426	3153	5580
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5582	20.088	NaN	3184.7	30	0	1170.4	0.106	+			44971	TVCEKTVLK	9	43	359.8710565402486	NaN	0	360.2051696777344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_TVC(Carbamidomethyl (C))EKTVLK_	ENSG00000198722|ENST00000635942|UNC13B;nc|ENSG00000198722|O14795-2|UNC13B;nc|ENSG00000198722|O14795|UNC13B	63.53385203322761	0.134247007536971	5				NaN	NaN	0	NaN	2427	3153	5580
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5583	20.09	NaN	1333.8	30	0	410.54	0.033	+			35432	SASASLPTK	9	43	431.2372720329628	860.4599911327256	2	431.2369079589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SASASLPTK_	ENSG00000141568|ENST00000335255|FOXK2;ENST00000473637.6_1_17:80553997-80559372:+|nuORF;ENST00000529652.1_1_17:80558017-80559372:+|nuORF;ENST00000571989.1_1_17:80551586-80559372:+|nuORF	42.86426827375447	0.38666266728046506	5				NaN	NaN	0	NaN	2428	3153	5580
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5601	20.127	NaN	1641.2	30	0	178.74	0.214	+			42469	TAMNGNLAK	9	49	460.237548828125	NaN	0	460.237548828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAMNGNLAK_	ENSG00000184675|ENST00000374869|AMER1	64.20726635412375	0.13137488984569443	5				NaN	NaN	0	NaN	2443	3156	5600
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5602	20.131	NaN	4429.1	30	0	592.67	0.034	+			1651	AGPLRKSSL	9	55	464.7827709243455	927.5509889154911	2	464.7826843261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AGPLRKSSL_	ENSG00000089820|ENST00000350060|ARHGAP4;ENST00000404127.6_1_X:153173185-153186849:-|nuORF;ENST00000460782.1_1_X:153186028-153186838:-|nuORF;nc|ENSG00000089820|P98171-2|ARHGAP4	69.6276240434122	0.14239879520340665	5				NaN	NaN	0	NaN	2444	3156	5600
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5620	20.168	NaN	5511	30	0	1764.1	0.214	+			16975	HPQQKVAVY	9	64	535.2941552097819	NaN	0	535.2938842773438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HPQQKVAVY_	ENSG00000102871|ENST00000345057|TRADD;ENST00000566104.1_1_16:67189803-67193780:-|nuORF	85.16082228582465	0.053699699744190164	5				NaN	NaN	0	NaN	2459	3159	5619
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5621	20.172	NaN	2711.7	30	0	272.8	0.106	+			16188	HEAQHGVTSL	10	56	539.768307358051	NaN	0	539.768310546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HEAQHGVTSL_	ENSG00000100105|ENST00000266269|PATZ1;nc|ENSG00000100105|Q9HBE1-2|PATZ1;nc|ENSG00000100105|Q9HBE1-3|PATZ1;nc|ENSG00000100105|Q9HBE1-4|PATZ1	88.17693792209575	0.06076230397739847	5				NaN	NaN	0	NaN	2460	3159	5619
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5622	20.174	NaN	4364.9	30	0	630.06	0.106			+	38711	SSLAVVQAQ	9	62	451.7509280147092	NaN	0	451.75103759765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSLAVVQAQ_	REV__ADARB2|p.A703Rfs*7|1|0.36|ENSG00000185736|chr10:1183306-1183306|C/-|frameshift_variant;REV__ADARB2|p.C490Vfs*61|1|0.3|ENSG00000185736|chr10:1233740-1233740|G/-|frameshift_variant;REV__ENSG00000185736|ENST00000381312|ADARB2	69.6276240434122	0.10825701912424071	5				NaN	NaN	0	NaN	2461	3159	5619
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5623	20.175	NaN	1602.9	30	0	213.23	0.106			+	50091	WGLTRSGAR	9	52	502.274815155293	NaN	0	502.2748718261719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_WGLTRSGAR_	REV__ENST00000468248.5_1_20:34205613-34205661:+|nuORF	59.93077597824379	0.14961415694175798	5				NaN	NaN	0	NaN	2462	3159	5619
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5624	20.177	NaN	2495.3	30	0	562.98	0.106	+			3884	ATAQAVAPPR	10	47	491.2770828212394	980.5396127092788	2	491.2778015136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATAQAVAPPR_	ENST00000609438.1_1_4:90171359-90228902:-|nuORF	68.84614121027924	0.2867470276772903	5				NaN	NaN	0	NaN	2463	3159	5619
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5625	20.179	NaN	4114.3	30	0	413.51	0.041			+	17588	IEEFKDERNDE	11	57	475.2176513671875	NaN	0	475.2176513671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IEEFKDERNDE_	REV__tr|U7SU20|U7SU20_FUSNUTrimericautotransporteradhesinYadA-likeC-terminalmembraneanchordomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01280PE=4SV=1	47.227680397652996	0.33523056580093125	5				NaN	NaN	0	NaN	2464	3159	5619
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5643	20.217	NaN	1905.9	30	0	271.52	0.214	+			15352	GTVRIGVAK	9	52	450.78487237262203	899.5551918120441	2	450.7847900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTVRIGVAK_	ENSG00000107186|ENST00000319217|MPDZ;ENST00000539508.5_1_9:13136054-13190160:-|nuORF;MPDZ|p.K1582Rfs*7|1|0.22|ENSG00000107186|chr9:13125278-13125278|T/-|frameshift_variant;nc|ENSG00000107186|O75970-2|MPDZ;nc|ENSG00000107186|O75970-3|MPDZ;nc|ENSG00000107186|O75970-5|MPDZ	52.936696900407355	0.27249468807391813	5				NaN	NaN	0	NaN	2479	3162	5642
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5644	20.22	NaN	2750.4	30	0	681.75	0.106	+			34926	SAAGAAFTK	9	47	412.21921806234747	822.423883191495	2	412.2193298339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAAGAAFTK_	ENSG00000258315|ENST00000439424|C17orf49;ENST00000549857.1_1_17:6918176-6918548:+|nuORF;nc|ENSG00000258315|Q8IXM2-2|BAP18;nc|ENSG00000258315|Q8IXM2-3|BAP18	58.2462437865262	0.22823408064396822	5				NaN	NaN	0	NaN	2480	3162	5642
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5645	20.222	NaN	768.55	30	0	114.28	0.106	+			2738	ARAFVQRF	8	37	497.7827453613281	NaN	0	497.7827453613281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ARAFVQRF_	DCAF8L2|p.R219H|1|0.36|ENSG00000189186|chrX:27747551-27747551|G/A|missense_variant;DCAF8L2|p.V527Cfs*7|1|0.39|ENSG00000189186|chrX:27748474-27748474|G/-|frameshift_variant;ENSG00000189186|ENST00000451261|DCAF8L2	26.79610172149135	1.7418937515398478	5				NaN	NaN	0	NaN	2481	3162	5642
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5646	20.224	NaN	645.56	30	0	108.4	0.035	+			30932	QELQDLGIA	9	35	493.76055908203125	NaN	0	493.76055908203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QELQDLGIA_	ENSG00000110031|ENST00000395074|LPXN;ENST00000530561.5_1_11:58294929-58321330:-|nuORF;nc|ENSG00000110031|O60711-2|LPXN	45.97224482568171	0.23445038899310136	5				NaN	NaN	0	NaN	2482	3162	5642
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5664	20.261	NaN	20763	30	0	1827	0.214	+			27741	MQNMSIHTK	9	90	363.8439375481605	1088.5099832446815	3	363.84417724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MQNMSIHTK_	CON__H-INV:HIT000292931;CON__P05787;CON__REFSEQ:XP_092267;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	65.46538089061403	0.16805504838372562	5				NaN	NaN	0	NaN	2497	3165	5663
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5665	20.265	NaN	3212.7	30	0	610.14	0.106			+	-1	TNTMKICGAA	10	56	361.5039945349124	1081.4901542049372	3	361.504150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_TNTM(Oxidation (M))KIC(Carbamidomethyl (C))GAA_	REV__ENSG00000174718|ENST00000312561|RESF1	39.873155843976775	0.5503138860789152	5				NaN	NaN	0	NaN	2498	3165	5663
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5666	20.267	NaN	2817.6	30	0	432.06	0.106				-1	HCIFILMLR	9	47	401.5544128417969	NaN	0	401.5544128417969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_HC(Carbamidomethyl (C))IFILMLR_	ENST00000267116.7_1_12:56634071-56634437:-|nuORF	27.882242232435846	0.3367954786602879	5				NaN	NaN	0	NaN	2499	3165	5663
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5667	20.269	NaN	1455.3	30	0	402.43	0.034			+	-1	LNMNTMCG	8	46	478.685181868604	955.355810804008	2	478.6851806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_LNMNTM(Oxidation (M))C(Carbamidomethyl (C))G_	REV__ENSG00000107443|ENST00000465148|CCNJ;REV__ENST00000450600.1_1_7:56296937-56297204:-|nuORF;REV__nc|ENSG00000107443|Q5T5M9-2|CCNJ;REV__nc|ENSG00000107443|Q5T5M9|CCNJ	19.359975847455235	0.7988239741663654	5				NaN	NaN	0	NaN	2500	3165	5663
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5685	20.306	NaN	4490.6	30	0	896.04	0.214			+	30254	PTAAAAPAAAA	11	56	441.73751590966657	881.4604788861332	2	441.7375793457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PTAAAAPAAAA_	REV__ENST00000423059.8_2_7:11676563-11871669:-|nuORF	53.351449002276354	0.38280258784255455	5				NaN	NaN	0	NaN	2515	3168	5684
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5686	20.31	NaN	6266.9	30	0	1501.9	0.106	+			35282	SALTDKAIVKK	11	61	391.9114172363457	1172.7124223092371	3	391.9115905761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SALTDKAIVKK_	ENSG00000176485|ENST00000415826|PLAAT3;ENST00000394613.3_1_11:63342419-63381578:-|nuORF	102.95473732560676	0.05457861179418332	5				NaN	NaN	0	NaN	2516	3168	5684
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5687	20.312	NaN	2412.8	30	0	525.16	0.106	+			39254	STAMNGNLAK	10	67	503.7528805338108	1005.4912081344216	2	503.75274658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STAMNGNLAK_	ENSG00000184675|ENST00000374869|AMER1	87.69643885390035	0.14426223466775756	5				NaN	NaN	0	NaN	2517	3168	5684
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5688	20.314	NaN	2453.2	30	0	295.93	0.034	+			49331	VVSETISSK	9	53	475.2637696899339	948.5129864466678	2	475.2641296386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVSETISSK_	ENSG00000179119|ENST00000336349|SPTY2D1;ENST00000536336.5_1_11:18633859-18655855:-|nuORF;nc|ENSG00000179119|Q68D10-2|SPTY2D1	49.44154591367651	0.3095138337212152	5				NaN	NaN	0	NaN	2518	3168	5684
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5705	20.349	NaN	4629.5	30	0	1710.8	0.214	+			5132	ATSSVSALK	9	52	432.2451433534339	862.4757337736678	2	432.2452392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSSVSALK_	ENSG00000177084|ENST00000320574|POLE;ENST00000539357.1_1_12:133257669-133263919:-|nuORF;POLE|p.A2030Pfs*18|1|0.14|ENSG00000177084|chr12:132632712-132632712|C/-|frameshift_variant;POLE|p.E396Sfs*16|1|0.1|ENSG00000177084|chr12:132675438-132675438|C/-|frameshift_variant;POLE|p.K1170Nfs*49|1|0.15|ENSG00000177084|chr12:132657208-132657208|T/-|frameshift_variant;POLE|p.K325Sfs*19|1|0.27|ENSG00000177084|chr12:132676142-132676142|G/-|frameshift_variant	72.87924865735499	0.12833875048249987	5				NaN	NaN	0	NaN	2532	3171	5704
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5706	20.352	NaN	840.07	30	0	87.42	0.106	+			42642	TAVGSSTRY	9	41	471.23757527310653	940.4605976130131	2	471.2372741699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAVGSSTRY_	ENSG00000173120|ENST00000529006|KDM2A;ENST00000524657.1_1_11:67020024-67022523:+|nuORF;nc|ENSG00000173120|Q9Y2K7-2|KDM2A;nc|ENSG00000173120|Q9Y2K7-4|KDM2A;nc|ENSG00000173120|Q9Y2K7-5|KDM2A	36.446750945000026	0.4619375763483977	5				NaN	NaN	0	NaN	2533	3171	5704
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5707	20.354	NaN	1395.4	30	0	149.47	0.106	+			31168	QGKYGNVTK	9	53	497.77104691369266	NaN	0	497.7710876464844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QGKYGNVTK_	ENSG00000184619|ENST00000396267|KRBA2;nc|ENSG00000184619|Q6ZNG9|KRBA2	71.87747018426188	0.0992163553043454	5				NaN	NaN	0	NaN	2534	3171	5704
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5708	20.356	NaN	2468.1	30	0	617.84	0.036	+			14146	GSMRIFTKK	9	34	356.5389925869646	NaN	0	356.5389709472656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GSMRIFTKK_	ENSG00000168883|ENST00000323701|USP39;ENST00000459775.5_1_2:85848673-85875928:+|nuORF;ENST00000493829.5_1_2:85843459-85872221:+|nuORF;nc|ENSG00000168883|Q53GS9-2|USP39;nc|ENSG00000168883|Q53GS9-3|USP39	19.1035232394073	0.3723251548669699	5				NaN	NaN	0	NaN	2535	3171	5704
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5726	20.393	NaN	2468.3	30	0	746.69	0.214			+	7232	DALALRTP	8	39	428.7481058999644	855.4816588667288	2	428.74810791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DALALRTP_	REV__ENST00000448973.6_1_16:684599-685202:-|nuORF	71.29570347882199	0.39610197767395533	5				NaN	NaN	0	NaN	2550	3174	5725
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5727	20.397	NaN	17103	30	0	5907.2	0.039	+			6477	AVYLSTCKDSK	11	61	424.54790017481605	1270.6218711246481	3	424.54803466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_AVYLSTC(Carbamidomethyl (C))KDSK_	ENSG00000231925|ENST00000434618|TAPBP;nc|ENSG00000231925|O15533-3|TAPBP;nc|ENSG00000231925|O15533-4|TAPBP	46.45678178249821	0.46959456050452836	5				NaN	NaN	0	NaN	2551	3174	5725
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5744	20.431	NaN	1070.3	30	0	131.96	0.214	+			7569	DIHKTNLCD	9	50	529.7504607429298	1057.4863685526595	2	529.7514038085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DIHKTNLCD_	SLC26A2|p.N296D|1|0.43|ENSG00000155850|chr5:149980479-149980479|A/G|missense_variant	29.14955571784316	0.5308295550522326	5				NaN	NaN	0	NaN	2565	3177	5743
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5745	20.435	NaN	1409.2	30	0	504.39	0.106			+	32148	QSPIGVSGP	9	43	421.22429797964884	NaN	0	421.2244567871094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QSPIGVSGP_	REV__ENST00000471466.5_1_5:176730621-176730690:-|nuORF	51.33545320467046	0.19748963086191895	5				NaN	NaN	0	NaN	2566	3177	5743
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5746	20.437	NaN	1493.6	30	0	279.32	0.036	+			29663	PGMERRGSLC	10	48	553.2664081277359	1104.5182633222717	2	553.2670288085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PGMERRGSLC_	ENST00000486389.5_1_19:36504471-36504513:-|nuORF	36.446750945000026	0.5818864909973037	5				NaN	NaN	0	NaN	2567	3177	5743
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5763	20.472	NaN	5774.8	30	0	2253.6	0.214	+			15408	GTYGLDSVKKK	11	38	399.2274169921875	NaN	0	399.2274169921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTYGLDSVKKK_	ENSG00000087338|ENST00000282570|GMCL1	29.550750289552195	0.43372083775723597	5				NaN	NaN	0	NaN	2581	3180	5762
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5764	20.476	NaN	1027.1	30	0	101.18	0.106	+			16367	HENDVKTAL	9	52	513.764404296875	NaN	0	513.764404296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HENDVKTAL_	ENSG00000165533|ENST00000380656|TTC8;nc|ENSG00000165533|Q8TAM2-3|TTC8;TTC8|p.K269Rfs*38|1|0.08|ENSG00000165533|chr14:88857236-88857237|-/GGATGAATAG|frameshift_variant	46.45678178249821	0.2311111838007999	5				NaN	NaN	0	NaN	2582	3180	5762
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5765	20.478	NaN	2429.7	30	0	319.49	0.106				-1	 	0	59	450.2262996029557	898.4380462727114	2	450.2266845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2583	3180	5762
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5766	20.48	NaN	1494	30	0	315.83	0.106	+			24406	LGAGSAPGPLV	11	40	469.76861982838506	NaN	0	469.76837158203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LGAGSAPGPLV_	ENST00000360315.7_1_19:19616542-19616689:+|nuORF	42.396135135203025	0.3699325281549567	5				NaN	NaN	0	NaN	2584	3180	5762
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5767	20.481	NaN	986.86	30	0	233.52	0.036			+	49522	VYAESTVAQS	10	28	527.7573713035027	NaN	0	527.7564697265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VYAESTVAQS_	REV__ENSG00000149577|ENST00000324225|SIDT2;REV__nc|ENSG00000149577|Q8NBJ9-2|SIDT2	42.396135135203025	0.3536752194735987	5				NaN	NaN	0	NaN	2585	3180	5762
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5785	20.519	NaN	2489.5	30	0	502.29	0.214			+	36544	SFIRKDTK	8	55	497.7877066453585	993.5608603575171	2	497.7878723144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SFIRKDTK_	REV__tr|U7SU86|U7SU86_FUSNUPseudouridinesynthaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01340PE=3SV=1	54.776311868738084	0.5534952410049249	5				NaN	NaN	0	NaN	2600	3183	5784
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5786	20.522	NaN	8111.5	30	0	1394.8	0.106	+			36162	SEKVSHVL	8	68	449.75318707201683	897.4918212108337	2	449.7533874511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEKVSHVL_	ENSG00000137076|ENST00000314888|TLN1;nc|ENSG00000137076|Q9Y490-2|TLN1	90.77665401227738	0.27511901818546464	5				NaN	NaN	0	NaN	2601	3183	5784
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5787	20.524	NaN	2351	30	0	924.69	0.034	+			36419	SETTAAHSL	9	47	458.72210918702507	915.4296654408502	2	458.7223205566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SETTAAHSL_	ENSG00000119408|ENST00000320246|NEK6;nc|ENSG00000119408|Q9HC98-2|NEK6;nc|ENSG00000119408|Q9HC98-3|NEK6;nc|ENSG00000119408|Q9HC98-4|NEK6	76.7741389293348	0.11149722112137898	5				NaN	NaN	0	NaN	2602	3183	5784
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5803	20.558	NaN	1200.6	30	0	186.64	0.143			+	28276	NEAHSRTIS	9	53	507.7504413575294	NaN	0	507.2677001953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NEAHSRTIS_	REV__ENSG00000166349|ENST00000299440|RAG1;REV__nc|ENSG00000166349|P15918-2|RAG1	51.33545320467046	0.19748963086191895	5				NaN	NaN	0	NaN	2615	3186	5802
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5821	20.596	NaN	7754	30	0	3088.3	0.214	+			15200	GTSSAVSLK	9	45	425.2373472674454	848.4601416016908	2	425.23748779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTSSAVSLK_	ENSG00000164828|ENST00000401592|SUN1;ENST00000340926.7_1_7:872152-889323:+|nuORF;ENST00000413171.6_1_7:872152-892516:+|nuORF;ENST00000427969.5_1_7:878456-882177:+|nuORF;ENST00000483996.1_1_7:872152-878624:+|nuORF;nc|ENSG00000164828|O94901-2|SUN1;nc|ENSG00000164828|O94901-3|SUN1;nc|ENSG00000164828|O94901-4|SUN1;nc|ENSG00000164828|O94901-5|SUN1;nc|ENSG00000164828|O94901-6|SUN1;nc|ENSG00000164828|O94901-7|SUN1;nc|ENSG00000164828|O94901-9|SUN1;SUN1|p.E739Gfs*27|1|0.41|ENSG00000164828|chr7:872532-872533|-/G|frameshift_variant	85.16082228582465	0.07850854922700509	5				NaN	NaN	0	NaN	2630	3189	5820
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5822	20.6	NaN	1046	30	0	125.13	0.106	+			1899	AINDKSIVK	9	42	494.29559326171875	NaN	0	494.29559326171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AINDKSIVK_	ENSG00000131351|ENST00000253669|HAUS8;nc|ENSG00000131351|Q9BT25-2|HAUS8;nc|ENSG00000131351|Q9BT25-3|HAUS8	52.936696900407355	0.1864545979552969	5				NaN	NaN	0	NaN	2631	3189	5820
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5823	20.602	NaN	3588.3	30	0	1181.9	0.037				-1	GMKMPYISGP	10	51	366.1761546515097	NaN	0	366.1762390136719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_GMKM(Oxidation (M))PYISGP_	ENSG00000147606|ENST00000276609|SLC26A7;nc|ENSG00000147606|Q8TE54-2|SLC26A7;SLC26A7|p.K333Nfs*20|5|0.37|ENSG00000147606|chr8:91340519-91340519|A/-|frameshift_variant	36.446750945000026	0.3805027428805705	5				NaN	NaN	0	NaN	2632	3189	5820
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5841	20.639	NaN	1320.3	30	0	137.93	0.214			+	20937	KKASTQINT	9	46	495.78253173828125	NaN	0	495.78253173828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KKASTQINT_	REV__ENSG00000100442|ENST00000396062|FKBP3	56.72105179125745	0.16330365735109603	5				NaN	NaN	0	NaN	2647	3192	5840
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5842	20.642	NaN	1819.6	30	0	298.07	0.106	+			48821	VVAQTKAISG	10	51	487.28786966458375	972.5611863959675	2	487.2880554199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVAQTKAISG_	ENSG00000275395|ENST00000616721|FCGBP;FCGBP-ACSS2|1|fusion;nc|ENSG00000275395|Q9Y6R7|FCGBP	37.50817390946774	0.5721060100277453	5				NaN	NaN	0	NaN	2648	3192	5840
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5843	20.644	NaN	2463.5	30	0	454.73	0.106	+			19404	KAPAPRPSL	9	47	468.784876810997	935.555200688794	2	468.78466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KAPAPRPSL_	DHX38|p.A739Pfs*17|1|0.38|ENSG00000140829|chr16:72105086-72105086|G/-|frameshift_variant;DHX38|p.G603Efs*22|1|0.36|ENSG00000140829|chr16:72103767-72103767|G/-|frameshift_variant;DHX38|p.G697Wfs*16|1|0.38|ENSG00000140829|chr16:72104557-72104558|-/T|frameshift_variant;ENSG00000140829|ENST00000268482|DHX38;nc|ENSG00000140829|Q92620-2|DHX38	34.172542307311794	0.4838870758800184	5				NaN	NaN	0	NaN	2649	3192	5840
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5844	20.646	NaN	4958.9	30	0	473.41	0.106				-1	 	0	64	642.9567937561378	1925.8485518686134	3	642.9564819335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2650	3192	5840
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5845	20.648	NaN	2405.5	30	0	1298	0.106	+			46807	VIAESVVKK	9	29	324.8742980957031	NaN	0	324.8742980957031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VIAESVVKK_	ENSG00000112367|ENST00000230124|FIG4	23.04248740728303	0.3589936788096251	5				NaN	NaN	0	NaN	2651	3192	5840
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5846	20.65	NaN	1279.1	30	0	225.5	0.035			+	24974	LLCPLLGGTN	10	38	500.7800675318918	NaN	0	500.7799987792969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LLCPLLGGTN_	REV__ENST00000532708.5_1_6:111913285-111922470:-|nuORF	31.954861631926434	0.3952518850925832	5				NaN	NaN	0	NaN	2652	3192	5840
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5864	20.686	NaN	4629.5	30	0	661.45	0.214				-1	 	0	60	366.725560299528	NaN	0	366.7254943847656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2667	3195	5863
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5865	20.69	NaN	12340	30	0	7584.5	0.106	+			41085	SVINKVTEK	9	44	339.8693484004563	1016.586215801569	3	339.86956787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVINKVTEK_	ENSG00000124784|ENST00000379834|RIOK1;RIOK1|p.E533Rfs*20|1|0.19|ENSG00000124784|chr6:7414384-7414385|-/A|frameshift_variant	54.776311868738084	0.25715957988447635	5				NaN	NaN	0	NaN	2668	3195	5863
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5866	20.692	NaN	11277	30	0	1736.4	0.106				-1	 	0	68	581.2633269921994	1740.7681515767981	3	581.2627563476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2669	3195	5863
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5867	20.694	NaN	3299	30	0	737.43	0.106	+			3851	ATALPTGTSK	10	46	473.7636231841332	945.5126934350665	2	473.7633972167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATALPTGTSK_	ENSG00000196470|ENST00000394725|SIAH1;nc|ENSG00000196470|Q8IUQ4-2|SIAH1;nc|ENSG00000196470|Q8IUQ4-3|SIAH1	61.691277971877994	0.35045824941635534	5				NaN	NaN	0	NaN	2670	3195	5863
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5868	20.696	NaN	1629.2	30	0	343.16	0.106			+	45133	TVKTWIKN	8	58	495.29277351226756	988.5709940913351	2	495.2667541503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TVKTWIKN_	REV__ENST00000338446.8_1_3:138352140-138352185:+|nuORF	38.80614096846853	0.6637206697844082	5				NaN	NaN	0	NaN	2671	3195	5863
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5869	20.697	NaN	432.72	30	0	62.255	0.034			+	26835	LVTSLLDR	8	32	458.77618408203125	NaN	0	458.77618408203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LVTSLLDR_	REV__ENSG00000179152|ENST00000342649|TCAIM	23.04248740728303	1.7418937515398478	5				NaN	NaN	0	NaN	2672	3195	5863
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5887	20.735	NaN	5875.6	30	0	1168.8	0.215				-1	IGSCYVAQ	8	56	449.2116100732277	896.4086672132554	2	449.2119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_IGSC(Carbamidomethyl (C))YVAQ_	ENST00000557238.5_1_14:47341050-47530490:-|nuORF;nc|ENSG00000132549|Q7Z7G8-4|VPS13B	45.9519527083369	0.6193794311207887	5				NaN	NaN	0	NaN	2687	3198	5886
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5888	20.739	NaN	5077	30	0	2509.3	0.106	+			12181	GAMKDIVKK	9	51	495.29277351226756	988.5709940913351	2	495.2934875488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GAMKDIVKK_	CARD6|p.M420I|1|0.33|ENSG00000132357|chr5:40852592-40852592|G/T|missense_variant;ENSG00000132357|ENST00000254691|CARD6	82.24051045832904	0.08786059719216216	5				NaN	NaN	0	NaN	2688	3198	5886
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5889	20.741	NaN	978.43	30	0	219.76	0.035			+	26418	LTFNKRCH	8	41	509.76776123046875	NaN	0	509.76776123046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LTFNKRCH_	REV__ENSG00000174796|ENST00000311638|THAP6;REV__nc|ENSG00000174796|Q8TBB0-3|THAP6;REV__THAP6|p.F138Lfs*7|1|0.06|ENSG00000174796|chr4:75521857-75521857|T/-|frameshift_variant	34.172542307311794	1.7418937515398478	5				NaN	NaN	0	NaN	2689	3198	5886
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5907	20.778	NaN	3848.4	30	0	1424.9	0.214			+	39127	SSVDLYQK	8	49	470.24243456598595	938.4703161987719	2	470.24237060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSVDLYQK_	REV__ENSG00000113645|ENST00000265293|WWC1;REV__ENST00000519659.5_1_5:167833263-167837001:+|nuORF;REV__nc|ENSG00000113645|Q8IX03-2|WWC1	51.33545320467046	0.5859736979383976	5				NaN	NaN	0	NaN	2704	3201	5906
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5908	20.782	NaN	1552.6	30	0	182.34	0.036	+			21727	KQLEDGRTL	9	49	530.2939857684548	NaN	0	530.2940673828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KQLEDGRTL_	ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000399822.2_1_9:22012279-22012411:+|nuORF;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;UBB|p.D191Tfs*35|2|0.18|ENSG00000170315|chr17:16382471-16382471|C/-|frameshift_variant;UBB|p.D191Tfs*35|2|0.18|ENSG00000170315|chr17:16382471-16382471|C/-|frameshift_variant	49.536043120802724	0.20989033510253738	5				NaN	NaN	0	NaN	2705	3201	5906
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5926	20.819	NaN	13076	30	0	2960.1	0.214				-1	 	0	72	450.26295211024257	898.5113512872852	2	450.26324462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2720	3204	5925
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5927	20.822	NaN	18201	30	0	2716.9	0.106				-1	 	0	74	533.8031850481586	1065.5918171631172	2	533.8040161132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2721	3204	5925
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5928	20.824	NaN	2167.7	30	0	517.77	0.106			+	40346	STTQDPTAG	9	45	439.19841486085994	876.3822767885199	2	439.1986999511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STTQDPTAG_	REV__ENSG00000094631|ENST00000334136|HDAC6;REV__nc|ENSG00000094631|Q9UBN7-2|HDAC6	46.45678178249821	0.34452392205506005	5				NaN	NaN	0	NaN	2722	3204	5925
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5929	20.826	NaN	1314.2	30	0	347.69	0.106	+			7755	DNPKVSVI	8	41	436.2478251181212	NaN	0	436.2480163574219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DNPKVSVI_	LMTK2|p.E678V|1|0.04|ENSG00000164715|chr7:98192498-98192498|A/T|missense_variant	38.80614096846853	1.7418937515398478	5				NaN	NaN	0	NaN	2723	3204	5925
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5930	20.828	NaN	1538.9	30	0	337.04	0.106	+			92	AADCAHEL	8	38	443.6896038173591	885.3646547015182	2	443.6898193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_AADC(Carbamidomethyl (C))AHEL_	ENSG00000157379|ENST00000288111|DHRS1;ENST00000558340.1_1_14:24760067-24761569:-|nuORF;ENST00000561137.5_1_14:24760413-24761527:-|nuORF;ENST00000561273.5_1_14:24760714-24761569:-|nuORF	55.50420428727701	0.5462892107279674	5				NaN	NaN	0	NaN	2724	3204	5925
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5931	20.83	NaN	741.37	30	0	87.25	0.037	+			43954	TPEEDQRTY	9	40	569.7541336291268	1137.4937143250536	2	569.7543334960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TPEEDQRTY_	ENSG00000105771|ENST00000270066|SMG9;ENST00000595700.5_1_19:44242246-44254893:-|nuORF;nc|ENSG00000105771|Q9H0W8-2|SMG9;SMG9|p.H366Tfs*2|1|0.22|ENSG00000105771|chr19:43734395-43734395|G/-|frameshift_variant	41.42661286455405	0.403525789677298	5				NaN	NaN	0	NaN	2725	3204	5925
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5932	20.83	NaN	1286	30	0	517.54	0.14	+			3993	ATAVYQAK	8	34	426.2347556644917	850.4549583957834	2	426.23455810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATAVYQAK_	ENSG00000136146|ENST00000258648|MED4;nc|ENSG00000136146|Q9NPJ6-2|MED4	49.44154591367651	0.597725784090933	5				NaN	NaN	0	NaN	2726	3204	5925
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5950	20.869	NaN	9484.5	30	0	2095.5	0.215	+			16141	HEAEGHIVTC	10	66	548.2475190501196	1094.4804851670392	2	548.248291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HEAEGHIVTC_	ENSG00000100028|ENST00000215829|SNRPD3;ENST00000468770.1_1_22:24953642-24953888:+|nuORF;nc|ENSG00000286070|P62318-2|SNRPD3	131.03138772384656	0.013145309490172483	5				NaN	NaN	0	NaN	2741	3207	5949
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5951	20.873	NaN	2591.1	30	0	315	0.106	+			23819	LCRLDCIII	9	57	531.295654296875	NaN	0	531.295654296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LCRLDCIII_	ENST00000457226.2_3_9:2017124-2029149:+|nuORF	87.69643885390035	0.04624013146650493	5				NaN	NaN	0	NaN	2742	3207	5949
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5952	20.875	NaN	3008.2	30	0	990.93	0.106	+			39313	STATATVSVGK	11	58	511.2792024682187	1020.5438520032375	2	511.279541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STATATVSVGK_	ENSG00000261150|ENST00000615648|EPPK1;EPPK1|p.G2015Vfs*36|2|0.33|ENSG00000261150|chr8:143867210-143867210|C/-|frameshift_variant;EPPK1|p.Q829Rfs*8|1|0.05|ENSG00000261150|chr8:143870770-143870770|C/-|frameshift_variant;EPPK1|p.Y695Ifs*68|1|0.36|ENSG00000261150|chr8:143871171-143871172|-/T|frameshift_variant	60.08019891989444	0.3227392355868966	5				NaN	NaN	0	NaN	2743	3207	5949
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5953	20.876	NaN	1926.5	30	0	211.13	0.106			+	343	AAQALLAESP	10	54	485.76377064228313	969.5129883513663	2	485.7633056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AAQALLAESP_	REV__ENSG00000167595|ENST00000646935|PROSER3;REV__nc|ENSG00000167595|Q2NL68|PROSER3	45.97224482568171	0.49411383603842696	5				NaN	NaN	0	NaN	2744	3207	5949
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5954	20.878	NaN	1404.5	30	0	300.94	0.106	+			44479	TSRITTFWKC	10	33	414.8823547363281	NaN	0	414.8823547363281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TSRITTFWKC_	chr12:90964326-90970044|237|14.79|0.2|6.24|-|1|EPYC,EPYC|1	26.063383197487333	0.4145965855542893	5				NaN	NaN	0	NaN	2745	3207	5949
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5955	20.88	NaN	1184.8	30	0	133.45	0.036			+	12272	GAWSLFVLGA	10	40	340.853759765625	NaN	0	340.853759765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GAWSLFVLGA_	REV__ENST00000533086.5_1_19:15226257-15226476:-|nuORF	29.170058357718403	0.40439580130713204	5				NaN	NaN	0	NaN	2746	3207	5949
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5956	20.881	NaN	599.65	30	0	93.295	0.14				-1	LGCLGECLGL	10	35	517.7545776367188	NaN	0	517.7545776367188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_LGC(Carbamidomethyl (C))LGECLGL_	ENSG00000127399|ENST00000359623|LRRC61	30.503639358989545	0.4000169810673414	5				NaN	NaN	0	NaN	2747	3207	5949
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5973	20.917	NaN	3999.4	30	0	624.59	0.214	+			2632	AQIKEHLLK	9	45	360.55695261845045	1078.6490284555514	3	360.5570983886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AQIKEHLLK_	EIF2B5|p.L605Pfs*9|1|0.26|ENSG00000145191|chr3:184143504-184143505|-/C|frameshift_variant;ENSG00000145191|ENST00000648915|EIF2B5;ENST00000481054.5_1_3:183853173-183856676:+|nuORF;ENST00000491144.5_1_3:183853173-183855624:+|nuORF	59.93077597824379	0.21419174904018318	5				NaN	NaN	0	NaN	2761	3210	5972
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5974	20.921	NaN	1658.7	30	0	294.33	0.034	+			25507	LPSNGGHSY	9	53	466.21702833798724	930.4195037427745	2	466.21685791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LPSNGGHSY_	ENSG00000103241|ENST00000262426|FOXF1	25.57405402267927	0.5642445186134241	5				NaN	NaN	0	NaN	2762	3210	5972
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5984	20.943	NaN	1744	30	0	257.67	0.142			+	43690	TKHLEAVK	8	46	463.2768527362365	NaN	0	463.2767639160156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TKHLEAVK_	REV__ENSG00000079819|ENST00000337057|EPB41L2;REV__nc|ENSG00000079819|O43491-2|EPB41L2;REV__nc|ENSG00000079819|O43491-3|EPB41L2;REV__nc|ENSG00000079819|O43491-4|EPB41L2	45.97224482568171	1.7418937515398478	5				NaN	NaN	0	NaN	2769	3213	5983
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5999	20.976	NaN	5025.7	30	0	637.67	0.214	+			33439	RILACGVAK	9	68	494.29205075216936	986.5695485711387	2	494.2925720214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_RILAC(Carbamidomethyl (C))GVAK_	ENSG00000265972|ENST00000582401|TXNIP	122.1759843771914	0.019882474861609503	5				NaN	NaN	0	NaN	2781	3216	5998
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6000	20.98	NaN	12293	30	0	4037.2	0.106	+			8	AAAAPGRAL	9	49	399.23485198027794	796.4551510273559	2	399.2353820800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAAAPGRAL_	ENST00000267984.3_1_15:81293571-81293748:+|nuORF;REV__ENST00000533080.5_1_11:44748805-44786009:+|nuORF	97.47269410471826	0.04379738608259218	5				NaN	NaN	0	NaN	2782	3216	5998
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6001	20.982	NaN	2059.8	30	0	352.97	0.035	+			20788	KIADMGHLK	9	56	506.78373664292445	1011.5529203526489	2	506.7843322753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KIADMGHLK_	ENSG00000132646|ENST00000379143|PCNA	74.1650062923329	0.12277912660386392	5				NaN	NaN	0	NaN	2783	3216	5998
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6019	21.02	NaN	1841.6	30	0	452.56	0.214	+			22450	KTLESAVVK	9	48	487.7969207706747	973.5792886081495	2	487.7972717285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTLESAVVK_	ENSG00000106772|ENST00000376718|PRUNE2;ENST00000492157.5_1_9:79438526-79520879:-|nuORF;nc|ENSG00000106772|Q8WUY3-2|PRUNE2;nc|ENSG00000106772|Q8WUY3-3|PRUNE2;nc|ENSG00000106772|Q8WUY3-4|PRUNE2;PRUNE2|p.L2591Qfs*12|1|0.19|ENSG00000106772|chr9:76703839-76703842|CTAA/-|frameshift_variant	56.43379154798735	0.2433427591689151	5				NaN	NaN	0	NaN	2798	3219	6018
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6020	21.023	NaN	650.17	30	0	87.168	0.036	+			16163	HEAERTEVL	9	38	542.2755092213047	NaN	0	542.27587890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HEAERTEVL_	CNTROB|p.L713Cfs*27|1|0.4|ENSG00000170037|chr17:7947710-7947710|T/-|frameshift_variant;ENSG00000170037|ENST00000563694|CNTROB;ENST00000571632.5_1_17:7838298-7849136:+|nuORF;nc|ENSG00000170037|Q8N137-2|CNTROB;nc|ENSG00000170037|Q8N137-3|CNTROB;nc|ENSG00000170037|Q8N137-4|CNTROB;nc|ENSG00000170037|Q8N137-5|CNTROB	30.317721548370564	0.32449924987115025	5				NaN	NaN	0	NaN	2799	3219	6018
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6038	21.06	NaN	5216.6	30	0	730.73	0.214	+			35773	SEADKIKVA	9	58	480.77124204242534	959.5279311516507	2	480.7711181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEADKIKVA_	ENSG00000178035|ENST00000326739|IMPDH2;ENST00000466147.5_1_3:49062090-49062580:-|nuORF;ENST00000484872.1_1_3:49061926-49062670:-|nuORF	90.60085204095205	0.06317133949006545	5				NaN	NaN	0	NaN	2814	3222	6037
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6039	21.064	NaN	2261.9	30	0	280.88	0.106	+			37621	SLQASLARP	9	50	471.771463155038	941.5283733768761	2	471.77130126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLQASLARP_	BTBD7|p.F167Lfs*15|1|0.27|ENSG00000011114|chr14:93294519-93294519|A/-|frameshift_variant;BTBD7|p.H927Tfs*21|1|0.2|ENSG00000011114|chr14:93242893-93242894|-/T|frameshift_variant;BTBD7|p.N566Mfs*22|1|0.26|ENSG00000011114|chr14:93253702-93253702|T/-|frameshift_variant;BTBD7|p.P760Lfs*61|1|0.45|ENSG00000011114|chr14:93246129-93246129|G/-|frameshift_variant;BTBD7|p.P768Qfs*53|2|0.3|ENSG00000011114|chr14:93246105-93246105|G/-|frameshift_variant;BTBD7|p.Y440Mfs*28|1|0.11|ENSG00000011114|chr14:93263838-93263838|A/-|frameshift_variant;ENSG00000011114|ENST00000334746|BTBD7;nc|ENSG00000011114|Q9P203-3|BTBD7	49.536043120802724	0.308405419312776	5				NaN	NaN	0	NaN	2815	3222	6037
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6040	21.066	NaN	1233.9	30	0	338.12	0.106			+	44515	TSTEAKSFV	9	47	485.2472713831918	968.4799898331836	2	485.24725341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TSTEAKSFV_	REV__ENSG00000135541|ENST00000265602|AHI1;REV__nc|ENSG00000135541|Q8N157-2|AHI1;REV__nc|ENSG00000135541|Q8N157-3|AHI1	34.172542307311794	0.4838870758800184	5				NaN	NaN	0	NaN	2816	3222	6037
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6041	21.068	NaN	6362.7	30	0	863.17	0.048				-1	 	0	64	618.6050184993263	1852.7932260981788	3	618.9396362304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2817	3222	6037
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6059	21.106	NaN	1513.9	30	0	273.03	0.214	+			2877	ASASASLPTK	10	51	466.7557011655493	931.4968493978986	2	466.7554016113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASASASLPTK_	ENSG00000141568|ENST00000335255|FOXK2;ENST00000473637.6_1_17:80553997-80559372:+|nuORF;ENST00000529652.1_1_17:80558017-80559372:+|nuORF;ENST00000571989.1_1_17:80551586-80559372:+|nuORF	70.39856735676683	0.27406383984062843	5				NaN	NaN	0	NaN	2832	3225	6058
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6060	21.11	NaN	747.38	30	0	296.48	0.036			+	-1	EEGLPGHCVP	10	35	547.7510150599701	NaN	0	547.7510375976562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_EEGLPGHC(Carbamidomethyl (C))VP_	REV__ENSG00000205592|ENST00000454784|MUC19	29.14955571784316	0.4044631218331212	5				NaN	NaN	0	NaN	2833	3225	6058
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6078	21.147	NaN	3343.3	30	0	2024.2	0.214				-1	 	0	34	323.20133025507903	644.3881075769581	2	323.2014465332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2848	3228	6077
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6079	21.15	NaN	3806.8	30	0	526.05	0.106	+			3737	ATAAVTAAVK	10	64	451.7686165235056	901.5226801138112	2	452.2706604003906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATAAVTAAVK_	ENSG00000165476|ENST00000373758|REEP3;nc|ENSG00000165476|Q6NUK4-2|REEP3	91.26522074875469	0.12383023862516404	5				NaN	NaN	0	NaN	2849	3228	6077
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6080	21.152	NaN	970.6	30	0	85.941	0.106	+			35038	SADKTVRVY	9	46	519.7838745117188	NaN	0	519.7838745117188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SADKTVRVY_	ENSG00000103994|ENST00000564754|ZNF106;nc|ENSG00000103994|Q9H2Y7-2|ZNF106;nc|ENSG00000103994|Q9H2Y7|ZNF106	52.936696900407355	0.1864545979552969	5				NaN	NaN	0	NaN	2850	3228	6077
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6081	21.154	NaN	1874.5	30	0	1331.4	0.106	+			13406	GLFLYPVGL	9	16	326.8587951660156	NaN	0	326.8587951660156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GLFLYPVGL_	AOC2|p.H235Y|1|0.11|ENSG00000131480|chr17:42845329-42845329|C/T|missense_variant	21.9598887501803	0.3626577482100488	5				NaN	NaN	0	NaN	2851	3228	6077
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6082	21.156	NaN	1540.9	30	0	489.4	0.106			+	34137	RSVEYVHY	8	39	526.7600995725362	1051.5056462118723	2	526.7622680664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RSVEYVHY_	REV__ENST00000462351.5_1_2:220160899-220172331:-|nuORF	30.503639358989545	0.7238069182250283	5				NaN	NaN	0	NaN	2852	3228	6077
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6083	21.158	NaN	1137.7	30	0	162.22	0.038			+	-1	TGMVGSIILRL	11	40	392.56521815431137	NaN	0	392.2314453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_TGM(Oxidation (M))VGSIILRL_	REV__ENST00000376588.3_1_9:80944321-80944381:+|nuORF	36.31764250033197	0.4035636655321173	5				NaN	NaN	0	NaN	2853	3228	6077
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6101	21.195	NaN	16522	30	0	3242.7	0.214	+			3071	ASFQSTSVK	9	63	477.74801174331907	953.4814705534382	2	477.74798583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASFQSTSVK_	ENSG00000050405|ENST00000341247|LIMA1;nc|ENSG00000050405|Q9UHB6-2|LIMA1;nc|ENSG00000050405|Q9UHB6-3|LIMA1;nc|ENSG00000050405|Q9UHB6-4|LIMA1;nc|ENSG00000050405|Q9UHB6-5|LIMA1	131.115847015877	0.014647977962315902	5				NaN	NaN	0	NaN	2868	3231	6100
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6102	21.199	NaN	7658.9	30	0	2000.8	0.106	+			37819	SMNANTITK	9	72	490.2476015688003	978.4806502044006	2	490.2472839355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SMNANTITK_	ENSG00000175467|ENST00000312397|SART1	125.68205650279488	0.017759985800556374	5				NaN	NaN	0	NaN	2869	3231	6100
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6103	21.201	NaN	2894.3	30	0	718.18	0.106	+			44620	TTEPLPEK	8	47	457.74461346571144	913.4746739982229	2	457.744873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TTEPLPEK_	ENSG00000076554|ENST00000518937|TPD52;ENST00000520877.5_1_8:80950353-80963533:-|nuORF;ENST00000521354.5_1_8:80950353-81083761:-|nuORF;ENST00000521618.1_1_8:80950353-80954926:-|nuORF;ENST00000523395.5_1_8:80950353-80963533:-|nuORF;nc|ENSG00000076554|P55327-2|TPD52;nc|ENSG00000076554|P55327-3|TPD52;nc|ENSG00000076554|P55327-5|TPD52;nc|ENSG00000076554|P55327-6|TPD52;nc|ENSG00000076554|P55327-7|TPD52;nc|ENSG00000076554|P55327|TPD52	68.78682469695295	0.41700713582915416	5				NaN	NaN	0	NaN	2870	3231	6100
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6104	21.203	NaN	2959.3	30	0	1561.9	0.106			+	-1	MIVCQACIMIQ	11	37	663.3081704310064	1324.6017879288127	2	663.307373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))IVC(Carbamidomethyl (C))QACIMIQ_	REV__ENST00000261537.6_1_18:19345801-19345864:+|nuORF	26.69291269510374	0.70980431218767	5				NaN	NaN	0	NaN	2871	3231	6100
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6105	21.204	NaN	334.31	30	0	49.052	0.031	+			45675	VAAAGRLA	8	23	364.7239074707031	NaN	0	364.7239074707031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VAAAGRLA_	ENSG00000167157|ENST00000372469|PRRX2;REV__ENST00000481848.6_2_6:127836176-127837095:-|nuORF	37.028477286268924	1.7418937515398478	5				NaN	NaN	0	NaN	2872	3231	6100
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6123	21.242	NaN	34776	30	0	24903	0.214	+			40884	SVFKPRTMQG	10	45	389.5374670978123	1165.590571893637	3	389.5376281738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_SVFKPRTM(Oxidation (M))QG_	ENSG00000082068|ENST00000265107|WDR70;ENST00000511906.5_1_5:37379391-37721408:+|nuORF;WDR70|p.V333Sfs*15|1|0.33|ENSG00000082068|chr5:37605137-37605137|A/-|frameshift_variant	53.08895987439943	0.42869529153390606	5				NaN	NaN	0	NaN	2887	3234	6122
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6124	21.245	NaN	2089.2	30	0	168.86	0.106	+			12740	GEKVVKTAL	9	46	472.7917187551095	943.568884577019	2	472.7919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEKVVKTAL_	ENSG00000133835|ENST00000510025|HSD17B4;ENST00000511186.5_1_5:118788168-118811542:+|nuORF;ENST00000515235.6_1_5:118788237-118827866:+|nuORF;HSD17B4|p.L703Ifs*15|1|0.06|ENSG00000133835|chr5:119536530-119536531|-/GAAAAATA|frameshift_variant;nc|ENSG00000133835|P51659-2|HSD17B4;nc|ENSG00000133835|P51659-3|HSD17B4	91.26522074875469	0.06129826844580791	5				NaN	NaN	0	NaN	2888	3234	6122
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6125	21.247	NaN	7648.1	30	0	1569.7	0.106				-1	VTCSQVHFK	9	59	369.1865952402866	1104.5379563210597	3	369.52117919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_VTC(Carbamidomethyl (C))SQVHFK_	ENSG00000174442|ENST00000307897|ZWILCH;nc|ENSG00000174442|Q9H900-2|ZWILCH	41.42661286455405	0.403525789677298	5				NaN	NaN	0	NaN	2889	3234	6122
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6126	21.249	NaN	6223.7	30	0	1548.1	0.106	+			4495	ATITDKEMLKK	11	47	426.57544487562484	1276.7045052270746	3	426.5755920410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATITDKEMLKK_	ANKRD17|p.L2249Yfs*84|1|0.34|ENSG00000132466|chr4:73090884-73090884|G/-|frameshift_variant;ENSG00000132466|ENST00000358602|ANKRD17;ENST00000514252.1_1_4:73978989-74017230:-|nuORF;nc|ENSG00000132466|O75179-2|ANKRD17;nc|ENSG00000132466|O75179-6|ANKRD17;nc|ENSG00000132466|O75179-7|ANKRD17	43.41853373365257	0.5111670701941979	5				NaN	NaN	0	NaN	2890	3234	6122
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6127	21.251	NaN	2302.4	30	0	571.25	0.033	+			35190	SAISAGAGLGA	11	51	437.7347106933594	NaN	0	437.7347106933594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SAISAGAGLGA_	ENST00000529051.5_1_11:124824106-124824726:+|nuORF	40.77816245573522	0.38155341215020716	5				NaN	NaN	0	NaN	2891	3234	6122
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6145	21.288	NaN	2899.5	30	0	900.65	0.214	+			18909	IVMETGNTK	9	46	496.75655075494456	991.4985485766891	2	496.75738525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IVMETGNTK_	ENSG00000171566|ENST00000499023|PLRG1;ENST00000506918.1_1_4:155463230-155466996:-|nuORF;nc|ENSG00000171566|O43660-2|PLRG1	65.46538089061403	0.16805504838372562	5				NaN	NaN	0	NaN	2906	3237	6144
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6146	21.291	NaN	2296.4	30	0	323.24	0.106			+	-1	TKSPSVSK	8	40	438.24491402634527	874.4752751194906	2	438.24517822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))TKSPSVSK_	REV__ENSG00000123485|ENST00000411486|HJURP;REV__HJURP|p.I551V|1|0.13|ENSG00000123485|chr2:233841129-233841129|T/C|missense_variant;REV__nc|ENSG00000123485|Q8NCD3-2|HJURP;REV__nc|ENSG00000123485|Q8NCD3-3|HJURP	64.20726635412375	0.4601301477144759	5				NaN	NaN	0	NaN	2907	3237	6144
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6147	21.293	NaN	1035.8	30	0	131.2	0.106	+			32700	RAGWIAER	8	39	479.7637551254281	NaN	0	479.7637023925781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RAGWIAER_	ENST00000322030.12_1_9:131451518-131451581:+|nuORF	66.42927471994793	1.7418937515398478	5				NaN	NaN	0	NaN	2908	3237	6144
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6148	21.295	NaN	1840.3	30	0	397.01	0.106			+	19330	KAIPNNKKTP	10	45	555.8353013289895	1109.656049724779	2	555.8358764648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KAIPNNKKTP_	REV__ENSG00000171094|ENST00000389048|ALK	31.529811441608018	0.6223461015008678	5				NaN	NaN	0	NaN	2909	3237	6144
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6149	21.297	NaN	1228.1	30	0	338.1	0.106	+			39855	STLNSCVSK	9	45	469.7351806228363	NaN	0	469.7354736328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STLNSCVSK_	ENSG00000115183|ENST00000263635|TANC1;ENST00000464096.1_1_2:160006874-160007087:+|nuORF;ENST00000465963.1_1_2:160005603-160007087:+|nuORF;TANC1|p.E735Lfs*10|1|0.14|ENSG00000115183|chr2:159178846-159178847|-/TC|frameshift_variant;TANC1|p.E735Sfs*8|1|0.27|ENSG00000115183|chr2:159178847-159178850|TCTC/-|frameshift_variant	46.45678178249821	0.2311111838007999	5				NaN	NaN	0	NaN	2910	3237	6144
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6150	21.299	NaN	3735	30	0	744.73	0.035	+			769	AEEPKARVL	9	54	506.7932224905971	1011.5718920479942	2	506.7923889160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEEPKARVL_	CDC25B|p.G524Afs*22|1|0.23|ENSG00000101224|chr20:3804645-3804645|A/-|frameshift_variant;ENSG00000101224|ENST00000245960|CDC25B;ENST00000468979.1_1_20:3782308-3783795:+|nuORF;ENST00000480816.5_1_20:3781734-3783795:+|nuORF;nc|ENSG00000101224|P30305-2|CDC25B;nc|ENSG00000101224|P30305-3|CDC25B;nc|ENSG00000101224|P30305-4|CDC25B	104.74654710444128	0.034358562718640136	5				NaN	NaN	0	NaN	2911	3237	6144
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6151	21.299	NaN	1185.9	30	0	153.39	0.138				-1	LLWGLLAQMC	10	38	402.2111511230469	NaN	0	402.2111511230469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_LLWGLLAQMC(Carbamidomethyl (C))_	ENST00000295598.9_1_1:116941306-116941363:+|nuORF	29.170058357718403	0.40439580130713204	5				NaN	NaN	0	NaN	2912	3237	6144
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6169	21.34	NaN	3479.3	30	0	831.61	0.214	+			15285	GTVAGAAVL	9	40	379.7238688108685	757.433184688537	2	379.72369384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTVAGAAVL_	ENSG00000160439|ENST00000415061|RDH13;ENST00000589305.5_1_19:55562362-55574430:-|nuORF	52.29916861842294	0.2778091507991977	5				NaN	NaN	0	NaN	2927	3240	6168
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6170	21.343	NaN	1287.3	30	0	522.04	0.106			+	24508	LGKCPCLGV	9	34	445.23466983602765	888.4547867388553	2	445.2345275878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LGKCPCLGV_	REV__ENST00000456170.5_1_1:44686783-44687191:-|nuORF	24.20275056022122	0.577060078256802	5				NaN	NaN	0	NaN	2928	3240	6168
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6171	21.345	NaN	2326.6	30	0	693.34	0.106	+			45322	TVSESGTATLK	11	55	547.2906232623011	1092.566693591402	2	547.2911987304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVSESGTATLK_	ENSG00000188112|ENST00000341865|C6orf132;nc|nan|Q5T0Z8-2|C6orf132;nc|nan|Q5T0Z8-4|C6orf132	96.0336014099291	0.0740748020614995	5				NaN	NaN	0	NaN	2929	3240	6168
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6172	21.347	NaN	1680.2	30	0	264.83	0.035			+	17139	HSSLASAVPL	10	50	491.27182192578067	980.5290909183614	2	491.2712097167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HSSLASAVPL_	REV__ENSG00000144560|ENST00000430365|VGLL4;REV__nc|ENSG00000144560|Q14135-2|VGLL4;REV__nc|ENSG00000144560|Q14135-4|VGLL4;REV__nc|ENSG00000144560|Q14135|VGLL4	37.15910966729921	0.575322462179216	5				NaN	NaN	0	NaN	2930	3240	6168
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6190	21.385	NaN	3109.3	30	0	734.02	0.214	+			22990	KVSDINISK	9	60	502.2934668258617	1002.5723807185234	2	502.2932434082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVSDINISK_	ENSG00000138193|ENST00000371380|PLCE1;PLCE1|p.A1544Pfs*9|1|0.07|ENSG00000138193|chr10:94273681-94273681|A/-|frameshift_variant;PLCE1|p.E2087Gfs*37|1|0.1|ENSG00000138193|chr10:94316672-94316676|AGAAG/-|frameshift_variant;PLCE1|p.P70Dfs*7|1|0.06|ENSG00000138193|chr10:94031253-94031254|-/GA|frameshift_variant;PLCE1|p.P70Lfs*8|1|0.04|ENSG00000138193|chr10:94031254-94031255|-/TAACA|frameshift_variant	89.56079334093651	0.06610360257297088	5				NaN	NaN	0	NaN	2945	3243	6189
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6191	21.388	NaN	5487.5	30	0	1522.5	0.106	+			5057	ATSGVVAVR	9	56	430.25340085174383	858.4922487702877	2	430.2535705566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATSGVVAVR_	ENSG00000074054|ENST00000696935|CLASP1;nc|ENSG00000074054|Q7Z460-2|CLASP1;nc|ENSG00000074054|Q7Z460-3|CLASP1;nc|ENSG00000074054|Q7Z460-4|CLASP1;nc|ENSG00000074054|Q7Z460-5|CLASP1;nc|ENSG00000074054|Q7Z460|CLASP1	122.1759843771914	0.019882474861609503	5				NaN	NaN	0	NaN	2946	3243	6189
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6192	21.39	NaN	16654	30	0	3769.4	0.106	+			4128	ATEHLSTLSEK	11	66	405.87893669167306	1214.6149806752192	3	405.8789367675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATEHLSTLSEK_	ENSG00000118137|ENST00000236850|APOA1	58.2462437865262	0.33910980880557884	5				NaN	NaN	0	NaN	2947	3243	6189
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6193	21.392	NaN	1648.7	30	0	220.52	0.106			+	39572	STGLLNVPT	9	51	451.25276737020596	900.4909818072119	2	451.2532958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STGLLNVPT_	REV__CCSER2|p.G33E|1|0.11|ENSG00000107771|chr10:84371150-84371150|G/A|missense_variant;REV__CCSER2|p.N53Ifs*40|1|0.35|ENSG00000107771|chr10:84371206-84371206|A/-|frameshift_variant;REV__ENSG00000107771|ENST00000372088|CCSER2;REV__nc|ENSG00000107771|Q9H7U1-2|CCSER2;REV__nc|ENSG00000107771|Q9H7U1|CCSER2	52.936696900407355	0.27249468807391813	5				NaN	NaN	0	NaN	2948	3243	6189
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6194	21.394	NaN	947.73	30	0	387.93	0.106	+			31625	QMFGIYGPEQ	10	38	585.267333984375	NaN	0	585.267333984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QMFGIYGPEQ_	ENSG00000091536|ENST00000647165|MYO15A;MYO15A|p.E2245Kfs*8|1|0.44|ENSG00000091536|chr17:18148533-18148533|G/-|frameshift_variant;MYO15A|p.P2208Rfs*45|1|0.09|ENSG00000091536|chr17:18148138-18148138|C/-|frameshift_variant	32.81241826257853	0.3924360933802784	5				NaN	NaN	0	NaN	2949	3243	6189
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6195	21.396	NaN	842.6	30	0	256.92	0.034			+	4865	ATPSPFQLG	9	32	459.2415771484375	NaN	0	459.2415771484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATPSPFQLG_	REV__ENST00000485383.1_1_3:96068520-96068997:+|nuORF	37.15910966729921	0.2899585034171616	5				NaN	NaN	0	NaN	2950	3243	6189
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6213	21.432	NaN	1592	30	0	346.09	0.214	+			32746	RAPRVTVS	8	49	443.2668457256265	884.5191385180531	2	443.2670593261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RAPRVTVS_	ENSG00000160194|ENST00000354250|NDUFV3	34.172542307311794	0.6954784234644539	5				NaN	NaN	0	NaN	2965	3246	6212
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6214	21.436	NaN	1060.6	30	0	202.2	0.106	+			38429	SSAKPGPAL	9	47	414.2352600097656	NaN	0	414.2352600097656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSAKPGPAL_	ENSG00000186260|ENST00000571589|MRTFB;nc|ENSG00000186260|Q9ULH7-2|MRTFB;nc|ENSG00000186260|Q9ULH7-3|MRTFB;nc|ENSG00000186260|Q9ULH7-4|MRTFB;nc|ENSG00000186260|Q9ULH7|MRTFB	60.97194046774394	0.14517358171632622	5				NaN	NaN	0	NaN	2966	3246	6212
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6215	21.438	NaN	1362.2	30	0	288.14	0.036			+	21218	KLFVNYDVA	9	45	534.7881336759106	1067.561714418621	2	534.7888793945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KLFVNYDVA_	REV__EFCAB6|p.S719Vfs*3|1|0.34|ENSG00000186976|chr22:43632182-43632182|T/-|frameshift_variant;REV__ENSG00000186976|ENST00000262726|EFCAB6;REV__ENST00000404038.5_1_22:44079617-44178198:-|nuORF;REV__nc|ENSG00000186976|Q5THR3-2|EFCAB6;REV__nc|ENSG00000186976|Q5THR3-5|EFCAB6;REV__nc|ENSG00000186976|Q5THR3-6|EFCAB6	58.78195531508484	0.22376836668196862	5				NaN	NaN	0	NaN	2967	3246	6212
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6233	21.476	NaN	32421	30	0	19959	0.214	+			1816	AIFQGKLEKK	10	68	387.90439796709313	1160.6913645014795	3	387.90447998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AIFQGKLEKK_	ENSG00000118322|ENST00000327245|ATP10B	84.81729255234993	0.1607459278640679	5				NaN	NaN	0	NaN	2982	3249	6232
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6234	21.479	NaN	5375.4	30	0	1091.6	0.106	+			4898	ATQGATEIVK	10	67	509.2820711248712	1016.5495893165424	2	509.2820129394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATQGATEIVK_	ENSG00000104321|ENST00000262209|TRPA1;TRPA1|p.G505Rfs*7|1|0.38|ENSG00000104321|chr8:72055452-72055453|-/T|frameshift_variant;TRPA1|p.L1023Ffs*15|1|0.42|ENSG00000104321|chr8:72023894-72023895|-/A|frameshift_variant;TRPA1|p.N377Ifs*25|1|0.08|ENSG00000104321|chr8:72056981-72056982|-/AAACTAATTTTGTTTATTA|frameshift_variant;TRPA1|p.T673Hfs*23|1|0.45|ENSG00000104321|chr8:72046557-72046557|T/-|frameshift_variant;TRPA1|p.Y327*|1|0.36|ENSG00000104321|chr8:72059399-72059402|TAAA/-|frameshift_variant	120.63048641472336	0.026439265609364573	5				NaN	NaN	0	NaN	2983	3249	6232
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6235	21.481	NaN	2611.2	30	0	256.52	0.106	+			15292	GTVDCVQAR	9	56	474.7317605324209	947.4489681316418	2	474.8832092285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTVDCVQAR_	ENSG00000150593|ENST00000280154|PDCD4;ENST00000489049.5_1_10:112647518-112650449:+|nuORF;nc|ENSG00000150593|Q53EL6-2|PDCD4	36.446750945000026	0.4619375763483977	5				NaN	NaN	0	NaN	2984	3249	6232
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6236	21.483	NaN	1080.3	30	0	312.87	0.106	+			32379	QVAPESHW	8	44	477.22641906365686	NaN	0	477.2263488769531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QVAPESHW_	ENSG00000167508|ENST00000301012|MVD;ENST00000563785.5_1_16:88722464-88729488:-|nuORF;ENST00000565149.5_1_16:88718935-88722722:-|nuORF	25.450171626174864	1.7418937515398478	5				NaN	NaN	0	NaN	2985	3249	6232
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6237	21.485	NaN	622.59	30	0	149.32	0.106			+	13192	GIANRARCVY	10	30	561.7935180664062	NaN	0	561.7935180664062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GIANRARCVY_	REV__ENSG00000154358|ENST00000680850|OBSCN;REV__nc|ENSG00000154358|Q5VST9-2|OBSCN;REV__nc|ENSG00000154358|Q5VST9-3|OBSCN;REV__nc|ENSG00000154358|Q5VST9-5|OBSCN;REV__nc|ENSG00000154358|Q5VST9-6|OBSCN;REV__nc|ENSG00000154358|Q5VST9|OBSCN;REV__OBSCN|p.E4688Dfs*35|1|0.03|ENSG00000154358|chr1:228318105-228318106|-/CATCTTC|frameshift_variant;REV__OBSCN|p.E4729Rfs*7|1|0.37|ENSG00000154358|chr1:228318930-228318931|-/C|frameshift_variant;REV__OBSCN|p.G1702Vfs*37|2|0.36|ENSG00000154358|chr1:228268769-228268769|G/-|frameshift_variant;REV__OBSCN|p.H7050Tfs*22|1|0.11|ENSG00000154358|chr1:228371922-228371922|C/-|frameshift_variant;REV__OBSCN|p.P6994Lfs*78|1|0.15|ENSG00000154358|chr1:228371756-228371756|C/-|frameshift_variant;REV__OBSCN|p.S5232Ffs*24|1|0.21|ENSG00000154358|chr1:228332900-228332901|-/T|frameshift_variant;REV__OBSCN|p.V3709Sfs*15|1|0.03|ENSG00000154358|chr1:228293609-228293610|-/A|frameshift_variant	23.04248740728303	0.42010282974921537	5				NaN	NaN	0	NaN	2986	3249	6232
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6238	21.487	NaN	729.86	30	0	122.59	0.035	+			51532	YWDTVRPL	8	44	525.2727661132812	NaN	0	525.2727661132812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YWDTVRPL_	ENSG00000159459|ENST00000290650|UBR1;UBR1|p.P1614Hfs*32|1|0.22|ENSG00000159459|chr15:42952443-42952443|G/-|frameshift_variant	32.81241826257853	1.7418937515398478	5				NaN	NaN	0	NaN	2987	3249	6232
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6239	21.487	NaN	374.46	30	0	53.178	0.14				-1	MCLVNKLK	8	29	503.7743225097656	NaN	0	503.7743225097656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))M(Oxidation (M))CLVNKLK_	ENST00000371873.9_1_1:47842873-47842906:+|nuORF	13.775330524044264	1.7418937515398478	5				NaN	NaN	0	NaN	2988	3249	6232
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6257	21.526	NaN	12770	30	0	3639.3	0.214	+			39692	STIKFQMKK	9	63	370.882508209599	1109.625695228997	3	370.8825988769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STIKFQMKK_	ENSG00000198755|ENST00000322203|RPL10A;ENST00000464112.5_1_6:35436546-35438524:+|nuORF;ENST00000472730.1_1_3:61728131-61728755:-|nuORF;ENST00000478340.2_1_6:35437033-35438524:+|nuORF	49.536043120802724	0.308405419312776	5				NaN	NaN	0	NaN	3003	3252	6256
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6258	21.53	NaN	3631.2	30	0	610.81	0.106	+			16151	HEAEPVRTL	9	64	526.2808837890625	NaN	0	526.2808837890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HEAEPVRTL_	ENSG00000177311|ENST00000321464|ZBTB38	77.31757898189308	0.08057531075035683	5				NaN	NaN	0	NaN	3004	3252	6256
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6259	21.532	NaN	6997.6	30	0	1069	0.034	+			15293	GTVDCVQAR	9	67	474.7317605324209	947.4489681316418	2	474.7313232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTVDCVQAR_	ENSG00000150593|ENST00000280154|PDCD4;ENST00000489049.5_1_10:112647518-112650449:+|nuORF;nc|ENSG00000150593|Q53EL6-2|PDCD4	109.47833844074708	0.029530294723441826	5				NaN	NaN	0	NaN	3005	3252	6256
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6277	21.569	NaN	3465.1	30	0	355.03	0.215	+			49238	VVNKVPLTGK	10	66	527.8343676556445	1053.654182378089	2	527.8349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVNKVPLTGK_	ENSG00000151135|ENST00000280756|TMEM263	94.4091291819064	0.10583072883246657	5				NaN	NaN	0	NaN	3020	3255	6276
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6278	21.572	NaN	744.08	30	0	124.83	0.106			+	22627	KTVDLLDRI	9	40	536.821533203125	NaN	0	536.821533203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTVDLLDRI_	REV__ENSG00000155980|ENST00000455537|KIF5A	29.170058357718403	0.3302935627494407	5				NaN	NaN	0	NaN	3021	3255	6276
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6279	21.574	NaN	1062.1	30	0	246.5	0.106	+			48667	VTSSVSTLK	9	46	461.26624529193185	NaN	0	461.26611328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTSSVSTLK_	ENSG00000186260|ENST00000571589|MRTFB;nc|ENSG00000186260|Q9ULH7-4|MRTFB;nc|ENSG00000186260|Q9ULH7|MRTFB	51.19269402634007	0.19847346126499396	5				NaN	NaN	0	NaN	3022	3255	6276
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6280	21.576	NaN	2667.4	30	0	790.55	0.034	+			32987	REELGRLA	8	54	472.2699194392321	942.5252859452643	2	472.2696533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_REELGRLA_	ENSG00000163661|ENST00000295927|PTX3	34.172542307311794	0.6954784234644539	5				NaN	NaN	0	NaN	3023	3255	6276
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6295	21.607	NaN	2263.4	30	0	939.36	0.145			+	19456	KARRRRKM	8	40	373.2330122759305	NaN	0	373.23333740234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_KARRRRKM(Oxidation (M))_	REV__ENSG00000109685|ENST00000508803|NSD2;REV__ENST00000508355.5_1_4:1902372-1920392:+|nuORF;REV__nc|ENSG00000109685|O96028-3|NSD2;REV__nc|ENSG00000109685|O96028-5|NSD2;REV__nc|ENSG00000109685|O96028-6|NSD2	47.91560031466742	1.7418937515398478	5				NaN	NaN	0	NaN	3035	3258	6294
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6303	21.627	NaN	5489.7	30	0	632	0.214	+			44845	TTTGHLIYK	9	62	517.2870892485773	1032.5596255639546	2	517.287841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTTGHLIYK_	EEF1A1|p.P263Lfs*27|1|0.36|ENSG00000156508|chr6:73518595-73518595|G/-|frameshift_variant;EEF1A2|p.T239Hfs*50|1|0.26|ENSG00000101210|chr20:63493194-63493195|-/G|frameshift_variant;EEF1A2|p.T239Rfs*40|1|0.31|ENSG00000101210|chr20:63493195-63493195|G/-|frameshift_variant;ENSG00000101210|ENST00000217182|EEF1A2;ENSG00000156508|ENST00000309268|EEF1A1;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	90.36981228632155	0.0638227155548745	5				NaN	NaN	0	NaN	3040	3261	6302
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6304	21.631	NaN	4422.3	30	0	826.9	0.033	+			1023	AEKLGGSAV	9	57	416.2320106352231	830.4494683372462	2	416.2322692871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEKLGGSAV_	ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65622809-65623088:-|nuORF	101.45984612302182	0.0377122763612125	5				NaN	NaN	0	NaN	3041	3261	6302
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6322	21.668	NaN	1553.2	30	0	208.83	0.214	+			41936	SVVQSGQLK	9	50	473.2715074628676	NaN	0	473.2713623046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVVQSGQLK_	ENGASE|p.S611Gfs*22|1|0.26|ENSG00000167280|chr17:79085943-79085950|CTGCCAGC/-|frameshift_variant;ENGASE|p.T547Hfs*45|1|0.16|ENSG00000167280|chr17:79085274-79085275|-/C|frameshift_variant;ENGASE|p.T547Pfs*14|2|0.35|ENSG00000167280|chr17:79085275-79085275|C/-|frameshift_variant;ENSG00000167280|ENST00000579016|ENGASE;nc|ENSG00000167280|Q8NFI3-2|ENGASE;nc|ENSG00000167280|Q8NFI3-3|ENGASE	58.22992032128504	0.15686832049467786	5				NaN	NaN	0	NaN	3056	3264	6321
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6323	21.671	NaN	1218.2	30	0	218.58	0.106	+			39020	SSSGTVLSK	9	43	433.234932744384	NaN	0	433.23443603515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSSGTVLSK_	ENSG00000145362|ENST00000357077|ANK2	37.81151784470057	0.28666463014928195	5				NaN	NaN	0	NaN	3057	3264	6321
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6324	21.673	NaN	1139.6	30	0	268.75	0.106			+	26430	LTGNGLHY	8	36	437.726042001903	NaN	0	437.72589111328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LTGNGLHY_	REV__CACNA1G|p.E1556Rfs*15|1|0.23|ENSG00000006283|chr17:50607978-50607978|G/-|frameshift_variant;REV__CACNA1G|p.E2317Rfs*47|1|0.22|ENSG00000006283|chr17:50626559-50626559|C/-|frameshift_variant;REV__CACNA1G|p.G548Wfs*31|1|0.08|ENSG00000006283|chr17:50576035-50576036|-/C|frameshift_variant;REV__CACNA1G|p.P2298Afs*13|1|0.4|ENSG00000006283|chr17:50626502-50626503|-/G|frameshift_variant;REV__CACNA1G|p.R516Gfs*48|1|0.26|ENSG00000006283|chr17:50575943-50575943|C/-|frameshift_variant;REV__ENSG00000006283|ENST00000359106|CACNA1G;REV__nc|ENSG00000006283|O43497-10|CACNA1G;REV__nc|ENSG00000006283|O43497-11|CACNA1G;REV__nc|ENSG00000006283|O43497-12|CACNA1G;REV__nc|ENSG00000006283|O43497-13|CACNA1G;REV__nc|ENSG00000006283|O43497-15|CACNA1G;REV__nc|ENSG00000006283|O43497-16|CACNA1G;REV__nc|ENSG00000006283|O43497-17|CACNA1G;REV__nc|ENSG00000006283|O43497-18|CACNA1G;REV__nc|ENSG00000006283|O43497-19|CACNA1G;REV__nc|ENSG00000006283|O43497-2|CACNA1G;REV__nc|ENSG00000006283|O43497-20|CACNA1G;REV__nc|ENSG00000006283|O43497-21|CACNA1G;REV__nc|ENSG00000006283|O43497-22|CACNA1G;REV__nc|ENSG00000006283|O43497-23|CACNA1G;REV__nc|ENSG00000006283|O43497-24|CACNA1G;REV__nc|ENSG00000006283|O43497-25|CACNA1G;REV__nc|ENSG00000006283|O43497-26|CACNA1G;REV__nc|ENSG00000006283|O43497-27|CACNA1G;REV__nc|ENSG00000006283|O43497-28|CACNA1G;REV__nc|ENSG00000006283|O43497-29|CACNA1G;REV__nc|ENSG00000006283|O43497-3|CACNA1G;REV__nc|ENSG00000006283|O43497-30|CACNA1G;REV__nc|ENSG00000006283|O43497-31|CACNA1G;REV__nc|ENSG00000006283|O43497-32|CACNA1G;REV__nc|ENSG00000006283|O43497-33|CACNA1G;REV__nc|ENSG00000006283|O43497-34|CACNA1G;REV__nc|ENSG00000006283|O43497-35|CACNA1G;REV__nc|ENSG00000006283|O43497-36|CACNA1G;REV__nc|ENSG00000006283|O43497-4|CACNA1G;REV__nc|ENSG00000006283|O43497-5|CACNA1G;REV__nc|ENSG00000006283|O43497-6|CACNA1G;REV__nc|ENSG00000006283|O43497-7|CACNA1G;REV__nc|ENSG00000006283|O43497-8|CACNA1G;REV__nc|ENSG00000006283|O43497-9|CACNA1G	25.450171626174864	1.7418937515398478	5				NaN	NaN	0	NaN	3058	3264	6321
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6325	21.675	NaN	8052.2	30	0	2726.2	0.033				-1	 	0	65	444.26867284813994	886.5227927630799	2	444.26922607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3059	3264	6321
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6343	21.713	NaN	37594	30	0	5069.7	0.214				-1	 	0	68	565.914899430834	1694.7228688927019	3	565.9154663085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3074	3267	6342
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6344	21.716	NaN	2913.6	30	0	1094.4	0.106	+			15227	GTSSVIVSR	9	34	453.25584323009207	904.4971335269842	2	453.2558288574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTSSVIVSR_	ENSG00000072803|ENST00000517395|FBXW11;nc|ENSG00000072803|Q9UKB1-2|FBXW11;nc|ENSG00000072803|Q9UKB1-3|FBXW11;nc|ENSG00000072803|Q9UKB1|FBXW11	54.722347961057174	0.257609425301511	5				NaN	NaN	0	NaN	3075	3267	6342
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6345	21.718	NaN	1211.2	30	0	308.1	0.106			+	14781	GTLAGLGGL	9	26	379.7238688108685	757.433184688537	2	379.7239990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTLAGLGGL_	REV__ARFRP1-ADRM1|1|fusion;REV__ENSG00000130706|ENST00000253003|ADRM1	33.51558372728122	0.4900267029546261	5				NaN	NaN	0	NaN	3076	3267	6342
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6346	21.72	NaN	1571.1	30	0	198.12	0.106			+	41007	SVGSIVLQN	9	48	458.758548318437	NaN	0	458.758544921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVGSIVLQN_	REV__tr|U7SV99|U7SV99_FUSNUDNApolymeraseIII,betasubunitOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01187PE=3SV=1	42.396135135203025	0.2590952873412954	5				NaN	NaN	0	NaN	3077	3267	6342
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6347	21.722	NaN	3356.3	30	0	1539.8	0.106			+	13459	GLKAWIALSV	10	36	353.2168884277344	NaN	0	353.2168884277344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GLKAWIALSV_	REV__ENSG00000111490|ENST00000539867|TBC1D30;REV__nc|ENSG00000288591|Q9Y2I9-3|TBC1D30;REV__nc|ENSG00000288591|Q9Y2I9-4|TBC1D30;REV__nc|ENSG00000288591|Q9Y2I9|TBC1D30	33.921630207806714	0.38879399011744475	5				NaN	NaN	0	NaN	3078	3267	6342
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6348	21.724	NaN	1969.9	30	0	346.6	0.034			+	26520	LTQASNLPL	9	47	478.7738476877363	955.5331424422726	2	478.7734680175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LTQASNLPL_	REV__ENSG00000167646|ENST00000524407|DNAAF3;REV__nc|ENSG00000167646|Q8N9W5-3|DNAAF3;REV__nc|ENSG00000167646|Q8N9W5-6|DNAAF3;REV__nc|ENSG00000167646|Q8N9W5-7|DNAAF3	67.49366992349736	0.1516260258713357	5				NaN	NaN	0	NaN	3079	3267	6342
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6349	21.724	NaN	794.9	30	0	114.93	0.138			+	34822	RYLGTADS	8	34	441.71868896484375	NaN	0	441.71868896484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RYLGTADS_	REV__nc|ENSG00000168309|O95990-3|FAM107A	23.04248740728303	1.7418937515398478	5				NaN	NaN	0	NaN	3080	3267	6342
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6364	21.756	NaN	1935.8	30	0	244.58	0.214	+			33479	RIYPELLK	8	58	516.3145699176234	NaN	0	516.3145751953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RIYPELLK_	ENSG00000164818|ENST00000297440|DNAAF5;nc|ENSG00000164818|Q86Y56-2|DNAAF5;nc|ENSG00000164818|Q86Y56-3|DNAAF5	40.77816245573522	1.7418937515398478	5				NaN	NaN	0	NaN	3092	3270	6363
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6365	21.76	NaN	5395.2	30	0	956.59	0.106			+	24753	LHSYAAHLQG	10	57	548.7814776293434	1095.5484023254867	2	548.7832641601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LHSYAAHLQG_	REV__ENSG00000283703|ENST00000686984|VSIG10L2;REV__nc|ENSG00000283703|P0DP72|VSIG10L2	32.81241826257853	0.6118718159329168	5				NaN	NaN	0	NaN	3093	3270	6363
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6366	21.762	NaN	2536.6	30	0	428.91	0.106	+			16429	HESDVKIVA	9	54	499.26901259887876	996.5234722645575	2	499.26898193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HESDVKIVA_	ENSG00000165238|ENST00000427277|WNK2;nc|ENSG00000165238|Q9Y3S1-2|WNK2;nc|ENSG00000165238|Q9Y3S1-3|WNK2;nc|ENSG00000165238|Q9Y3S1-4|WNK2;nc|ENSG00000165238|Q9Y3S1|WNK2;WNK2|p.S1424Pfs*5|1|0.34|ENSG00000165238|chr9:93288908-93288908|C/-|frameshift_variant;WNK2|p.T1980Lfs*12|2|0.16|ENSG00000165238|chr9:93297965-93297965|C/-|frameshift_variant	74.1650062923329	0.12277912660386392	5				NaN	NaN	0	NaN	3094	3270	6363
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6367	21.764	NaN	3253.7	30	0	580.51	0.106	+			36208	SELPAKRL	8	57	457.27681050136965	912.5390680695393	2	457.27679443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SELPAKRL_	CIZ1|p.T876Hfs*5|1|0.4|ENSG00000148337|chr9:128166268-128166268|T/-|frameshift_variant;ENSG00000148337|ENST00000372938|CIZ1;ENST00000476727.6_1_9:130931703-130953136:-|nuORF;nc|ENSG00000148337|Q9ULV3-2|CIZ1;nc|ENSG00000148337|Q9ULV3-3|CIZ1;nc|ENSG00000148337|Q9ULV3-4|CIZ1;nc|ENSG00000148337|Q9ULV3-5|CIZ1	31.954861631926434	0.7126016770032289	5				NaN	NaN	0	NaN	3095	3270	6363
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6368	21.765	NaN	2439.9	30	0	696.72	0.039			+	-1	STWRRLGCVL	10	46	416.56256103515625	NaN	0	416.56256103515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_STWRRLGC(Carbamidomethyl (C))VL_	REV__ENST00000605201.1_1_14:35591893-35592281:+|nuORF	28.081489160057373	0.40797012399963245	5				NaN	NaN	0	NaN	3096	3270	6363
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6386	21.802	NaN	34591	30	0	4571.2	0.215			+	-1	KGAAKCIAK	9	76	473.77828029942896	945.5420076656579	2	473.7785339355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_KGAAKC(Carbamidomethyl (C))IAK_	REV__ENSG00000065183|ENST00000349139|WDR3;REV__WDR3|p.A919Cfs*2|1|0.38|ENSG00000065183|chr1:117959363-117959364|-/T|frameshift_variant	60.97194046774394	0.20551255781574032	5				NaN	NaN	0	NaN	3111	3273	6385
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6387	21.806	NaN	71814	30	0	31670	0.106	+			14596	GTGALKTDFTR	11	58	389.5434746226154	1165.6085944680462	3	389.5435485839844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTGALKTDFTR_	ENSG00000211456|ENST00000389061|SACM1L;ENST00000464102.5_1_3:45776682-45785158:+|nuORF;nc|ENSG00000211456|Q9NTJ5-2|SACM1L	58.2462437865262	0.33910980880557884	5				NaN	NaN	0	NaN	3112	3273	6385
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6388	21.808	NaN	8241.5	30	0	1105.5	0.106	+			18526	ISLDNAGKI	9	72	465.76611282692085	929.5176727206417	2	465.7665100097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ISLDNAGKI_	ZFX|p.D218N|1|0.63|ENSG00000005889|chrX:24207331-24207331|G/A|missense_variant	67.49366992349736	0.1516260258713357	5				NaN	NaN	0	NaN	3113	3273	6385
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6389	21.81	NaN	4547.8	30	0	795.42	0.035	+			12235	GASGSFKLNK	10	62	504.777167724786	1007.539782516372	2	504.7776184082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GASGSFKLNK_	ENSG00000124575|ENST00000244534|H1-3;ENSG00000124610|ENST00000244573|H1-1;ENSG00000168298|ENST00000304218|H1-4;ENSG00000184357|ENST00000331442|H1-5;ENSG00000187837|ENST00000343677|H1-2	112.10723106719422	0.0417416748461292	5				NaN	NaN	0	NaN	3114	3273	6385
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6407	21.847	NaN	2630.2	30	0	531.74	0.214	+			19924	KEFEGKTL	8	46	476.260655460665	950.5067579881301	2	476.26055908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEFEGKTL_	ENSG00000080824|ENST00000216281|HSP90AA1;ENST00000378770.1_1_4:190394307-190396341:+|nuORF;ENST00000530115.1_1_11:27910903-27911533:-|nuORF;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000205100|Q58FG1|HSP90AA4P	85.16082228582465	0.29211966821764696	5				NaN	NaN	0	NaN	3129	3276	6406
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6408	21.851	NaN	3834.4	30	0	641.04	0.106	+			16208	HECASINRI	9	65	550.26858472618	1098.52261651916	2	550.2695922851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_HEC(Carbamidomethyl (C))ASINRI_	ENSG00000172531|ENST00000376745|PPP1CA;ENSG00000186298|ENST00000335007|PPP1CC;ENSG00000213639|ENST00000395366|PPP1CB;ENST00000526510.5_1_11:67166008-67168740:-|nuORF;ENST00000532446.5_1_11:67166008-67168991:-|nuORF;nc|ENSG00000172531|P62136-2|PPP1CA;nc|ENSG00000172531|P62136-3|PPP1CA;nc|ENSG00000186298|P36873-2|PPP1CC;PPP1CB|p.E217Rfs*3|1|0.29|ENSG00000213639|chr2:28788708-28788709|-/G|frameshift_variant	95.81516180277367	0.04847050768394289	5				NaN	NaN	0	NaN	3130	3276	6406
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6409	21.853	NaN	3015	30	0	652.45	0.106				-1	AAPCLSKA	8	50	409.2153278659929	816.4161027987858	2	409.21514892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_AAPC(Carbamidomethyl (C))LSKA_	ENSG00000175697|ENST00000464295|GPR156;GPR156|p.L789Wfs*15|1|0.18|ENSG00000175697|chr3:120167113-120167113|C/-|frameshift_variant;nc|ENSG00000175697|Q8NFN8-2|GPR156	26.79610172149135	0.7524337208463756	5				NaN	NaN	0	NaN	3131	3276	6406
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6410	21.855	NaN	2295.5	30	0	408.57	0.106	+			34013	RSIQVDGKTIK	11	52	415.58197021484375	NaN	0	415.58197021484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RSIQVDGKTIK_	ENSG00000103769|ENST00000261890|RAB11A;ENSG00000185236|ENST00000328024|RAB11B;ENST00000598706.1_1_19:8455252-8465174:+|nuORF;nc|ENSG00000103769|P62491-2|RAB11A;nc|ENSG00000185236|Q15907-2|RAB11B	69.2159832094219	0.14432973555992734	5				NaN	NaN	0	NaN	3132	3276	6406
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6411	21.856	NaN	1449.9	30	0	254.3	0.106	+			46922	VIWGTGQLFQ	10	38	383.5402526855469	NaN	0	383.5402526855469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VIWGTGQLFQ_	ENSG00000030066|ENST00000378460|NUP160;nc|ENSG00000030066|Q12769|NUP160	30.317721548370564	0.4006274431774794	5				NaN	NaN	0	NaN	3133	3276	6406
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6412	21.858	NaN	522.63	30	0	83.856	0.033	+			18047	IISSALKN	8	28	423.2580871582031	NaN	0	423.2580871582031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IISSALKN_	ENST00000489256.5_1_2:242051898-242052042:-|nuORF	30.503639358989545	1.7418937515398478	5				NaN	NaN	0	NaN	3134	3276	6406
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6413	21.859	NaN	1393.2	30	0	439.69	0.138	+			18870	IVGPNGVGK	9	43	420.75029567618424	839.4860384191685	2	420.7502746582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IVGPNGVGK_	ABCF1|p.S665R|1|0.46|ENSG00000204574|chr6:30586675-30586675|T/A|missense_variant;ENSG00000204574|ENST00000326195|ABCF1;nc|ENSG00000204574|Q8NE71-2|ABCF1	40.5726180659479	0.4135428067754104	5				NaN	NaN	0	NaN	3135	3276	6406
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6431	21.898	NaN	4878.2	30	0	1645.4	0.214			+	3853	ATALRTTAAL	10	34	330.19778652729843	NaN	0	330.1978454589844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATALRTTAAL_	REV__ENST00000326587.11_1_X:51639959-51639995:+|nuORF	44.377184641726394	0.34115073642966565	5				NaN	NaN	0	NaN	3150	3279	6430
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6432	21.902	NaN	1302.7	30	0	464.14	0.033	+			37877	SNVHKVQG	8	32	434.73549497203163	867.4564370108633	2	434.73553466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SNVHKVQG_	OSBPL7|p.E685K|1|0.34|ENSG00000006025|chr17:47809193-47809193|C/T|missense_variant	18.324413293986947	0.7971860551947066	5				NaN	NaN	0	NaN	3151	3279	6430
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6450	21.939	NaN	2943.7	30	0	715.98	0.214	+			44671	TTGQVVAMK	9	52	467.75469832335983	933.4948437135197	2	467.7546081542969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTGQVVAMK_	ENSG00000170312|ENST00000395284|CDK1;ENST00000475504.6_1_10:62539923-62545554:+|nuORF;nc|ENSG00000170312|P06493-2|CDK1	98.58198989935565	0.04066992115528678	5				NaN	NaN	0	NaN	3166	3282	6449
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6451	21.942	NaN	793.92	30	0	310.48	0.106				-1	CQKKAHLM	8	32	508.2620544433594	NaN	0	508.2620544433594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_C(Carbamidomethyl (C))QKKAHLM_	ENST00000413027.1_1_6:31248141-31248948:+|nuORF	20.481830146152948	1.741893751539848	5				NaN	NaN	0	NaN	3167	3282	6449
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6452	21.944	NaN	5229.7	30	0	3317.3	0.106				-1	ALCSAAQAAWR	11	40	402.201010141682	1203.581201025246	3	402.2011413574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_ALC(Carbamidomethyl (C))SAAQAAWR_	ENSG00000148824|ENST00000317502|MTG1;ENST00000460848.5_1_10:135207724-135215322:+|nuORF;ENST00000495014.5_1_10:135207724-135213140:+|nuORF;nc|ENSG00000148824|Q9BT17-2|MTG1	22.561587123415745	0.7531385481947795	5				NaN	NaN	0	NaN	3168	3282	6449
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6453	21.946	NaN	1906.4	30	0	352.17	0.038			+	2277	ALYKVADERP	10	38	387.87889576084274	NaN	0	387.54437255859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ALYKVADERP_	REV__ENSG00000115183|ENST00000263635|TANC1;REV__nc|ENSG00000115183|Q9C0D5-2|TANC1;REV__TANC1|p.E735Lfs*10|1|0.14|ENSG00000115183|chr2:159178846-159178847|-/TC|frameshift_variant;REV__TANC1|p.E735Sfs*8|1|0.27|ENSG00000115183|chr2:159178847-159178850|TCTC/-|frameshift_variant	27.047317107675042	0.41136583337917604	5				NaN	NaN	0	NaN	3169	3282	6449
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6471	21.984	NaN	9605.4	30	0	2655.7	0.214	+			3928	ATASPIVAR	9	64	443.26102519838696	884.5074974635739	2	443.2610778808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATASPIVAR_	ENSG00000131725|ENST00000254029|WDR44;nc|ENSG00000131725|Q5JSH3-2|WDR44;nc|ENSG00000131725|Q5JSH3-4|WDR44;WDR44|p.N542Mfs*11|2|0.39|ENSG00000131725|chrX:118409575-118409575|A/-|frameshift_variant	77.31757898189308	0.1091473830098891	5				NaN	NaN	0	NaN	3184	3285	6470
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6472	21.987	NaN	2555.8	30	0	1206.7	0.106			+	16671	HILEEDRAC	9	37	543.2562837191749	NaN	0	543.25634765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HILEEDRAC_	REV__ENSG00000138759|ENST00000512123|FRAS1;REV__FRAS1|p.C3202Afs*11|1|0.32|ENSG00000138759|chr4:78508825-78508825|C/-|frameshift_variant;REV__FRAS1|p.G3456Afs*3|1|0.28|ENSG00000138759|chr4:78515987-78515987|G/-|frameshift_variant;REV__FRAS1|p.P3289Lfs*45|1|0.05|ENSG00000138759|chr4:78511358-78511359|-/T|frameshift_variant;REV__FRAS1|p.V2385Sfs*37|1|0.28|ENSG00000138759|chr4:78466329-78466329|G/-|frameshift_variant;REV__nc|ENSG00000138759|Q86XX4-4|FRAS1;REV__nc|ENSG00000138759|Q86XX4-5|FRAS1;REV__nc|ENSG00000138759|Q86XX4-6|FRAS1;REV__nc|ENSG00000138759|Q86XX4|FRAS1	25.57405402267927	0.3484490411150625	5				NaN	NaN	0	NaN	3185	3285	6470
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6473	21.989	NaN	5811	30	0	756.06	0.106				-1	 	0	63	571.9183615985328	1712.733255395798	3	571.9194946289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3186	3285	6470
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6474	21.991	NaN	1205	30	0	287.67	0.106	+			49352	VVSQDVKLS	9	53	487.77947998046875	NaN	0	487.77947998046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVSQDVKLS_	ENSG00000133138|ENST00000357242|TBC1D8B;TBC1D8B|p.F1096Lfs*5|1|0.14|ENSG00000133138|chrX:106873885-106873885|T/-|frameshift_variant	56.72105179125745	0.16330365735109603	5				NaN	NaN	0	NaN	3187	3285	6470
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6475	21.993	NaN	3981.3	30	0	709.24	0.037				-1	MPVCHLLTAP	10	50	380.19622563449417	1137.5668475036825	3	380.196533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_MPVC(Carbamidomethyl (C))HLLTAP_	ENST00000603928.2_2_9:136894278-136894515:+|nuORF	30.317721548370564	0.6322445173429027	5				NaN	NaN	0	NaN	3188	3285	6470
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6493	22.03	NaN	2431	30	0	400.05	0.214			+	2710	AQSIHWYL	8	50	509.26349496356215	NaN	0	509.263427734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AQSIHWYL_	REV__CHRM2|p.R211Q|1|0.3|ENSG00000181072|chr7:137015497-137015497|G/A|missense_variant	40.5726180659479	1.7418937515398478	5				NaN	NaN	0	NaN	3203	3288	6492
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6494	22.034	NaN	2966.2	30	0	543.31	0.106	+			36592	SGAQPILSK	9	55	450.76099474848	899.50743656376	2	450.7610778808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SGAQPILSK_	ENSG00000105355|ENST00000221957|PLIN3;nc|ENSG00000105355|O60664-3|PLIN3;nc|ENSG00000105355|O60664-4|PLIN3	101.45984612302182	0.0377122763612125	5				NaN	NaN	0	NaN	3204	3288	6492
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6495	22.036	NaN	4145.7	30	0	2059	0.039			+	-1	GLLRRAMREE	10	51	416.2279357910156	NaN	0	416.2279357910156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_GLLRRAM(Oxidation (M))REE_	REV__ENSG00000129116|ENST00000505667|PALLD;REV__nc|ENSG00000129116|Q8WX93-2|PALLD;REV__nc|ENSG00000129116|Q8WX93-3|PALLD;REV__nc|ENSG00000129116|Q8WX93-4|PALLD;REV__nc|ENSG00000129116|Q8WX93-5|PALLD;REV__nc|ENSG00000129116|Q8WX93-8|PALLD;REV__nc|ENSG00000129116|Q8WX93|PALLD;REV__PALLD|p.A715V|1|0.49|ENSG00000129116|chr4:168894622-168894622|C/T|missense_variant	31.529811441608018	0.39664753963064203	5				NaN	NaN	0	NaN	3205	3288	6492
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6513	22.073	NaN	885.42	30	0	248.3	0.143	+			32490	QVPNATTPPA	10	41	498.26080322265625	NaN	0	498.26080322265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QVPNATTPPA_	ENSG00000161544|ENST00000293230|CYGB	25.57405402267927	0.4162033004763879	5				NaN	NaN	0	NaN	3220	3291	6512
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6528	22.106	NaN	19073	30	0	2193.6	0.214	+			40365	STTTGHLIYK	10	82	560.8030426543179	1119.5915323754357	2	560.8048095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STTTGHLIYK_	EEF1A1|p.P263Lfs*27|1|0.36|ENSG00000156508|chr6:73518595-73518595|G/-|frameshift_variant;EEF1A2|p.T239Hfs*50|1|0.26|ENSG00000101210|chr20:63493194-63493195|-/G|frameshift_variant;EEF1A2|p.T239Rfs*40|1|0.31|ENSG00000101210|chr20:63493195-63493195|G/-|frameshift_variant;ENSG00000101210|ENST00000217182|EEF1A2;ENSG00000156508|ENST00000309268|EEF1A1;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	93.1432384553994	0.11307820852620741	5				NaN	NaN	0	NaN	3232	3294	6527
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6529	22.11	NaN	3027.7	30	0	909.71	0.106	+			39578	STGNMVISK	9	55	468.7443990409777	935.4742451487555	2	468.7450256347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STGNMVISK_	ENSG00000102837|ENST00000219022|OLFM4	112.2953585152457	0.026655838328212944	5				NaN	NaN	0	NaN	3233	3294	6527
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6530	22.112	NaN	1257.5	30	0	249.17	0.106				-1	 	0	40	519.235687635068	518.2284111684679	1	519.2379760742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3234	3294	6527
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6531	22.113	NaN	707.71	30	0	66.748	0.106			+	43296	TFPPRVDAN	9	40	508.7624660967841	NaN	0	508.76336669921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TFPPRVDAN_	REV__ENSG00000128573|ENST00000350908|FOXP2;REV__ENSG00000137166|ENST00000307972|FOXP4;REV__ENST00000441290.6_1_7:114296499-114304492:+|nuORF;REV__nc|ENSG00000128573|O15409-2|FOXP2;REV__nc|ENSG00000128573|O15409-4|FOXP2;REV__nc|ENSG00000128573|O15409-9|FOXP2;REV__nc|ENSG00000137166|Q8IVH2-2|FOXP4;REV__nc|ENSG00000137166|Q8IVH2-3|FOXP4	19.1035232394073	0.3723251548669699	5				NaN	NaN	0	NaN	3235	3294	6527
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6532	22.115	NaN	8731.6	30	0	2859.2	0.106			+	-1	STLLCSAKQL	10	45	374.20438137683027	1119.5913147306908	3	374.205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_STLLC(Carbamidomethyl (C))SAKQL_	REV__ENST00000324198.10_1_22:26124128-26124356:+|nuORF	30.317721548370564	0.6322445173429027	5				NaN	NaN	0	NaN	3236	3294	6527
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6533	22.117	NaN	1202.5	30	0	192.44	0.036	+			32863	RDCLRSFTD	9	43	556.7627486304091	1111.510944327618	2	556.764892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RDCLRSFTD_	ENSG00000140455|ENST00000380324|USP3;nc|ENSG00000140455|Q9Y6I4-2|USP3	40.77816245573522	0.41113185337114944	5				NaN	NaN	0	NaN	3237	3294	6527
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6551	22.155	NaN	5249.6	30	0	1526.4	0.214	+			14208	GSSEPITVK	9	55	459.2501934426907	NaN	0	459.2499084472656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSSEPITVK_	ENSG00000066044|ENST00000407627|ELAVL1;nc|ENSG00000066044|Q15717-2|ELAVL1	42.86426827375447	0.2558691296974908	5				NaN	NaN	0	NaN	3252	3297	6550
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6552	22.158	NaN	2852.7	30	0	397.55	0.106	+			46202	VEAEKQAAL	9	52	479.7636357082074	957.5127184832148	2	479.7636413574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VEAEKQAAL_	ENSG00000143850|ENST00000272203|PLEKHA6;PLEKHA6|p.D852Tfs*20|1|0.44|ENSG00000143850|chr1:204230443-204230443|G/-|frameshift_variant	87.69643885390035	0.07135982304947239	5				NaN	NaN	0	NaN	3253	3297	6550
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6553	22.16	NaN	3612.6	30	0	1190.1	0.038				-1	KKFNQLMKK	9	49	394.2340964176163	NaN	0	394.2342529296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_KKFNQLM(Oxidation (M))KK_	ENSG00000146414|ENST00000275233|SHPRH;nc|ENSG00000146414|Q149N8-2|SHPRH;nc|ENSG00000146414|Q149N8-4|SHPRH;nc|ENSG00000146414|Q149N8-5|SHPRH;SHPRH|p.G458Efs*26|2|0.28|ENSG00000146414|chr6:145945588-145945588|T/-|frameshift_variant;SHPRH|p.G458Rfs*9|1|0.36|ENSG00000146414|chr6:145945587-145945588|-/T|frameshift_variant;SHPRH|p.K420Ifs*4|1|0.09|ENSG00000146414|chr6:145946295-145946296|-/ATATA|frameshift_variant;SHPRH|p.L762Wfs*6|1|0.29|ENSG00000146414|chr6:145941828-145941828|A/-|frameshift_variant	31.529811441608018	0.3183796599642538	5				NaN	NaN	0	NaN	3254	3297	6550
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6571	22.197	NaN	1575.9	30	0	133.57	0.214	+			9148	EGMRKTIT	8	50	476.2508400922932	NaN	0	475.7741394042969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_EGM(Oxidation (M))RKTIT_	ENSG00000138759|ENST00000512123|FRAS1;FRAS1|p.C3202Afs*11|1|0.32|ENSG00000138759|chr4:78508825-78508825|C/-|frameshift_variant;FRAS1|p.G3456Afs*3|1|0.28|ENSG00000138759|chr4:78515987-78515987|G/-|frameshift_variant;FRAS1|p.P3289Lfs*45|1|0.05|ENSG00000138759|chr4:78511358-78511359|-/T|frameshift_variant;FRAS1|p.V2385Sfs*37|1|0.28|ENSG00000138759|chr4:78466329-78466329|G/-|frameshift_variant;nc|ENSG00000138759|Q86XX4|FRAS1	71.87747018426188	1.7418937515398478	5				NaN	NaN	0	NaN	3269	3300	6570
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6572	22.201	NaN	1401.9	30	0	394.31	0.106	+			5184	ATTKYAQL	8	42	448.2469482421875	NaN	0	448.2469482421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATTKYAQL_	ENST00000453514.5_1_5:78908461-78908533:+|nuORF	51.33545320467046	1.7418937515398478	5				NaN	NaN	0	NaN	3270	3300	6570
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6573	22.203	NaN	6671.5	30	0	5063.1	0.106			+	33513	RKPALVGVDF	10	38	367.8837148932273	1100.629315279882	3	367.8836364746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RKPALVGVDF_	REV__ENST00000310924.6_1_17:77911334-77911703:-|nuORF	29.170058357718403	0.6416167986984785	5				NaN	NaN	0	NaN	3271	3300	6570
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6574	22.205	NaN	1430.3	30	0	489.86	0.106				-1	WLVERWHFIML	11	46	515.9412841796875	NaN	0	515.9412841796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_WLVERWHFIM(Oxidation (M))L_	ENSG00000164169|ENST00000322396|PRMT9;nc|ENSG00000164169|Q6P2P2-2|PRMT9	9.64613948735714	0.456735970842152	5				NaN	NaN	0	NaN	3272	3300	6570
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6575	22.206	NaN	883.85	30	0	102.18	0.033	+			13226	GIHFILGV	8	38	428.2594909667969	NaN	0	428.2594909667969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GIHFILGV_	tr|U7SLQ9|U7SLQ9_FUSNUL-lysineexporterfamilyproteinLysE/ArgOOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01862PE=3SV=1	24.504012794735996	1.7418937515398478	5				NaN	NaN	0	NaN	3273	3300	6570
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6593	22.243	NaN	5272.6	30	0	1123.8	0.214	+			42538	TARMRVAP	8	55	451.25647357865483	900.4983942241097	2	451.2574462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TARMRVAP_	nc|ENSG00000125755|Q92797-2|SYMPK	33.51558372728122	0.7005509609380386	5				NaN	NaN	0	NaN	3288	3303	6592
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6594	22.247	NaN	1259.9	30	0	196.78	0.106	+			26376	LTDLGKSLK	9	48	487.7977294921875	NaN	0	487.7977294921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LTDLGKSLK_	tr|U7STM8|U7STM8_FUSNUHTHmarR-typedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01402PE=4SV=1	47.657333605630114	0.2228375344433429	5				NaN	NaN	0	NaN	3289	3303	6592
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6595	22.249	NaN	1814	30	0	216.3	0.036	+			34168	RTATIMIQK	9	57	531.3100570633113	1060.6055611934225	2	531.3114624023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RTATIMIQK_	ENSG00000167306|ENST00000285039|MYO5B	51.52775601994872	0.28504342437107444	5				NaN	NaN	0	NaN	3290	3303	6592
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6613	22.287	NaN	2005.3	30	0	420.45	0.214	+			41812	SVSSGVQIL	9	44	445.25273432665426	888.4909157201085	2	445.25299072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSSGVQIL_	ENSG00000136866|ENST00000374227|ZFP37;nc|ENSG00000136866|Q9Y6Q3-2|ZFP37;nc|ENSG00000136866|Q9Y6Q3-3|ZFP37;ZFP37|p.N161Ifs*24|1|0.47|ENSG00000136866|chr9:113044136-113044136|T/-|frameshift_variant	32.81241826257853	0.4965981579233955	5				NaN	NaN	0	NaN	3305	3306	6612
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6614	22.29	NaN	3924.4	30	0	1047.4	0.106				-1	ATCDHPYIVK	10	47	401.865480862278	1202.574613187034	3	401.86566162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_ATC(Carbamidomethyl (C))DHPYIVK_	ENSG00000072786|ENST00000176763|STK10;ENST00000519710.1_1_5:171533786-171583726:-|nuORF;STK10|p.T526Pfs*15|3|0.11|ENSG00000072786|chr5:172090341-172090341|T/-|frameshift_variant	35.15202426646627	0.5927656479315102	5				NaN	NaN	0	NaN	3306	3306	6612
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6615	22.292	NaN	2211.4	30	0	490.82	0.106	+			38793	SSMSTALSK	9	51	456.22854706842173	910.4425412036435	2	456.22869873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSMSTALSK_	nc|ENSG00000138119|Q9NZM1-3|MYOF	134.7655990226056	0.012935733000282069	5				NaN	NaN	0	NaN	3307	3306	6612
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6616	22.294	NaN	587.92	30	0	89.156	0.048				-1	 	0	28	618.6051635742188	NaN	0	618.6051635742188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3308	3306	6612
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6634	22.332	NaN	10062	30	0	2096.2	0.214	+			38182	SQCGSLIGK	9	64	475.241879488988	948.469206044776	2	475.2421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SQC(Carbamidomethyl (C))GSLIGK_	ENSG00000090097|ENST00000461554|PCBP4;ENSG00000183570|ENST00000681687|PCBP3;ENSG00000197111|ENST00000546463|PCBP2;ENST00000468429.5_1_21:47321003-47359956:+|nuORF;ENST00000492809.5_1_3:51992079-51994784:-|nuORF;ENST00000497390.5_1_3:51992079-51994784:-|nuORF;ENST00000547717.1_1_12:53848575-53861193:+|nuORF;ENST00000548190.1_1_12:53849722-53854210:+|nuORF;nc|ENSG00000090097|P57723-2|PCBP4;nc|ENSG00000183570|P57721-2|PCBP3;nc|ENSG00000183570|P57721-3|PCBP3;nc|ENSG00000183570|P57721-4|PCBP3;nc|ENSG00000183570|P57721-5|PCBP3;nc|ENSG00000197111|Q15366-2|PCBP2;nc|ENSG00000197111|Q15366-4|PCBP2;nc|ENSG00000197111|Q15366-5|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;nc|ENSG00000197111|Q15366-7|PCBP2;nc|ENSG00000197111|Q15366-8|PCBP2;nc|ENSG00000197111|Q15366|PCBP2;PCBP2|p.T202Kfs*26|1|0.32|ENSG00000197111|chr12:53464773-53464773|C/-|frameshift_variant;PCBP4|p.G203Efs*11|1|0.1|ENSG00000090097|chr3:51959397-51959398|-/CTCT|frameshift_variant	89.02883481214508	0.06760336634167786	5				NaN	NaN	0	NaN	3323	3309	6633
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6635	22.335	NaN	953	30	0	208.39	0.036			+	-1	LCFILYAL	8	46	527.7877807617188	NaN	0	527.7877807617188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))LC(Carbamidomethyl (C))FILYAL_	REV__CD19|p.A294T|1|0.22|ENSG00000177455|chr16:28935488-28935488|G/A|missense_variant;REV__ENSG00000177455|ENST00000538922|CD19;REV__nc|ENSG00000177455|P15391-2|CD19	24.504012794735996	1.7418937515398478	5				NaN	NaN	0	NaN	3324	3309	6633
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6653	22.372	NaN	1458.6	30	0	247.93	0.214	+			3397	ASQEIAEKALK	11	34	396.55908203125	NaN	0	396.55908203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASQEIAEKALK_	ENSG00000126945|ENST00000316594|HNRNPH2;ENSG00000169045|ENST00000393432|HNRNPH1;ENST00000522958.5_1_5:179046175-179048291:-|nuORF;HNRNPH2|p.L296Yfs*20|1|0.57|ENSG00000126945|chrX:101412869-101412869|G/-|frameshift_variant	55.08391021199286	0.27880418946526786	5				NaN	NaN	0	NaN	3339	3312	6652
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6654	22.376	NaN	4188.8	30	0	837.12	0.106			+	23691	LASYHKRG	8	65	466.2581352059643	930.5017174787287	2	466.25848388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LASYHKRG_	REV__ENST00000316407.8_2_3:113379152-113379233:-|nuORF	60.29395666154354	0.49887135096048313	5				NaN	NaN	0	NaN	3340	3312	6652
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6655	22.378	NaN	6118	30	0	1144.3	0.106	+			33407	RIFAPNHVVAK	11	67	417.91547129793	1250.72458449399	3	417.9156799316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RIFAPNHVVAK_	ENSG00000105640|ENST00000222247|RPL18A;ENST00000600238.1_1_19:17972170-17973061:+|nuORF;ENST00000602216.1_1_19:17970765-17972392:+|nuORF	90.14881205920913	0.09816545110109878	5				NaN	NaN	0	NaN	3341	3312	6652
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6656	22.38	NaN	2145.1	30	0	632.48	0.035			+	22889	KVLSTKGIGP	10	31	333.8778295975569	998.6116593928707	3	333.8778381347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KVLSTKGIGP_	REV__tr|U7T2B6|U7T2B6_FUSNULonproteaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=lonPE=2SV=1	23.04248740728303	0.69165701907106	5				NaN	NaN	0	NaN	3342	3312	6652
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6674	22.417	NaN	6451.6	30	0	1156.5	0.214	+			40998	SVGQTVITK	9	65	466.7741466272847	NaN	0	466.7740783691406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVGQTVITK_	ENSG00000107077|ENST00000381309|KDM4C;nc|ENSG00000293552|Q9H3R0-2|KDM4C	80.45461616416974	0.0698259577396595	5				NaN	NaN	0	NaN	3357	3315	6673
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6675	22.421	NaN	4376.5	30	0	746.7	0.106	+			277	AANVGRVV	8	49	393.2350289872666	784.4555050413333	2	393.2347412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AANVGRVV_	ENSG00000162981|ENST00000295092|LRATD1	79.9392285194092	0.32408006123154964	5				NaN	NaN	0	NaN	3358	3315	6673
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6676	22.423	NaN	2225.8	30	0	413.05	0.106	+			42806	TEAPLNPKA	9	51	470.7586384579819	939.5027239827638	2	470.7583312988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TEAPLNPKA_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000446382.2_1_9:6834760-6835018:+|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000502306.1_1_5:15450853-15451165:+|nuORF;ENST00000567299.1_1_19:9629420-9629708:+|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;nc|ENSG00000204434|Q9BYX7|POTEKP	56.72105179125745	0.24094814563026265	5				NaN	NaN	0	NaN	3359	3315	6673
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6677	22.425	NaN	3307.1	30	0	994.03	0.106			+	-1	LCMKSHAH	8	48	500.2291146257408	998.4436763182816	2	500.2288513183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_LC(Carbamidomethyl (C))M(Oxidation (M))KSHAH_	REV__ENST00000515045.1_1_5:177059209-177059329:-|nuORF	20.481830146152948	0.8005983782650069	5				NaN	NaN	0	NaN	3360	3315	6673
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6678	22.426	NaN	751.31	30	0	86.228	0.034	+			49286	VVQEVVDGK	9	37	486.7714538574219	NaN	0	486.7714538574219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVQEVVDGK_	CON__P35900;ENSG00000171431|ENST00000167588|KRT20	47.95952297671804	0.22075498469600283	5				NaN	NaN	0	NaN	3361	3315	6673
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6696	22.464	NaN	9974.1	30	0	3708.9	0.214	+			45071	TVHNIIVGK	9	69	490.79795823089734	979.5813635285947	2	490.7983093261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVHNIIVGK_	ENSG00000110048|ENST00000263847|OSBP;ENSG00000184792|ENST00000332585|OSBP2;nc|ENSG00000184792|Q969R2-2|OSBP2;nc|ENSG00000184792|Q969R2-3|OSBP2;nc|ENSG00000184792|Q969R2-4|OSBP2;nc|ENSG00000184792|Q969R2-5|OSBP2;nc|ENSG00000184792|Q969R2-6|OSBP2	88.17693792209575	0.07000514020414955	5				NaN	NaN	0	NaN	3376	3318	6695
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6697	22.468	NaN	9694.5	30	0	3118.4	0.106	+			5025	ATSDMDIGK	9	56	469.21826093259847	936.421968931997	2	469.21856689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATSDMDIGK_	ENSG00000102158|ENST00000618282|MAGT1	124.08010499294276	0.018729767491916592	5				NaN	NaN	0	NaN	3377	3318	6695
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6698	22.47	NaN	10759	30	0	948.79	0.106	+			33326	RGSLNEQIAL	10	66	550.8062522018683	1099.5979514705366	2	550.8078002929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RGSLNEQIAL_	ENSG00000107897|ENST00000396271|ACBD5;nc|ENSG00000107897|Q5T8D3-2|ACBD5;nc|ENSG00000107897|Q5T8D3-4|ACBD5;nc|ENSG00000107897|Q5T8D3|ACBD5	101.25262130126117	0.07397688119410509	5				NaN	NaN	0	NaN	3378	3318	6695
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6699	22.471	NaN	1181	30	0	204.4	0.106			+	29707	PHEKSAAM	8	38	435.7104095655383	NaN	0	435.7107238769531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PHEKSAAM_	REV__ENST00000452707.1_1_1:27248648-27248801:+|nuORF	42.47446043378293	1.7418937515398478	5				NaN	NaN	0	NaN	3379	3318	6695
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6700	22.473	NaN	4687.3	30	0	2899.4	0.106	+			41147	SVIWTLTPEGK	11	38	410.8948974609375	NaN	0	410.8948974609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVIWTLTPEGK_	DIS3L2|p.I516Ffs*15|1|0.43|ENSG00000144535|chr2:232263321-232263321|C/-|frameshift_variant;DIS3L2|p.L768Pfs*56|1|0.27|ENSG00000144535|chr2:232334638-232334639|-/C|frameshift_variant;DIS3L2|p.P612Rfs*33|1|0.4|ENSG00000144535|chr2:232329903-232329903|C/-|frameshift_variant;ENSG00000144535|ENST00000325385|DIS3L2;ENST00000433430.5_1_2:233103253-233124568:+|nuORF;ENST00000445090.5_1_2:233028172-233195406:+|nuORF;nc|ENSG00000144535|Q8IYB7-2|DIS3L2;nc|ENSG00000144535|Q8IYB7-3|DIS3L2	29.550750289552195	0.43372083775723597	5				NaN	NaN	0	NaN	3380	3318	6695
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6701	22.475	NaN	811.68	30	0	81.449	0.036	+			21268	KLNEVIVNK	9	38	528.8251342773438	NaN	0	528.8251342773438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KLNEVIVNK_	ENSG00000140199|ENST00000354181|SLC12A6;nc|ENSG00000140199|Q9UHW9-2|SLC12A6;nc|ENSG00000140199|Q9UHW9-3|SLC12A6;nc|ENSG00000140199|Q9UHW9-4|SLC12A6;nc|ENSG00000140199|Q9UHW9-5|SLC12A6;nc|ENSG00000140199|Q9UHW9-6|SLC12A6	62.107414245175825	0.1403307765918332	5				NaN	NaN	0	NaN	3381	3318	6695
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6702	22.476	NaN	507.32	30	0	56.684	0.141	+			37904	SPAQEDGKVY	10	41	547.2622680664062	NaN	0	547.2622680664062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SPAQEDGKVY_	ENSG00000126264|ENST00000246551|HCST	42.86426827375447	0.3507156137006061	5				NaN	NaN	0	NaN	3382	3318	6695
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6720	22.515	NaN	14037	30	0	2344.5	0.214	+			37052	SIRVTQKSYK	10	86	417.90668232860963	1250.698217586029	3	417.9067077636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SIRVTQKSYK_	CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000550170.5_1_12:53294858-53298765:-|nuORF;KRT8|p.R18Gfs*56|1|0.24|ENSG00000170421|chr12:52904930-52904930|G/-|frameshift_variant;nc|ENSG00000170421|P05787-2|KRT8	56.632244143249146	0.3964695498866976	5				NaN	NaN	0	NaN	3397	3321	6719
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6721	22.518	NaN	1216.8	30	0	187.73	0.036			+	21742	KQMKCNKK	8	58	532.787512013089	NaN	0	532.7874755859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_KQMKC(Carbamidomethyl (C))NKK_	REV__CNTLN|p.I1388Nfs*3|1|0.3|ENSG00000044459|chr9:17502587-17502588|-/A|frameshift_variant;REV__CNTLN|p.K1130Rfs*14|1|0.25|ENSG00000044459|chr9:17462996-17462996|A/-|frameshift_variant;REV__CNTLN|p.M1308*|1|0.36|ENSG00000044459|chr9:17484355-17484355|A/-|frameshift_variant;REV__CNTLN|p.M1308Nfs*9|1|0.46|ENSG00000044459|chr9:17484354-17484355|-/A|frameshift_variant;REV__CNTLN|p.T1324Dfs*27|1|0.14|ENSG00000044459|chr9:17484406-17484407|-/A|frameshift_variant;REV__ENSG00000044459|ENST00000380647|CNTLN;REV__nc|ENSG00000044459|Q9NXG0|CNTLN	68.484700416344	1.7418937515398478	5				NaN	NaN	0	NaN	3398	3321	6719
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6739	22.556	NaN	4629.3	30	0	1278.7	0.214	+			16923	HPLSDHEATL	10	59	560.2745732527662	1118.5345935723324	2	560.2747802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HPLSDHEATL_	ENSG00000204525|ENST00000376228|HLA-C;ENST00000487245.5_1_6:31236948-31239147:-|nuORF;HLA-C|p.A269Gfs*66|1|0.07|ENSG00000204525|chr6:31270299-31270300|-/C|frameshift_variant;nc|ENSG00000204525|P10321-2|HLA-C	108.08749611321984	0.05367918236594901	5				NaN	NaN	0	NaN	3413	3324	6738
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6740	22.559	NaN	1535.3	30	0	190.83	0.106	+			1615	AGMALGIQK	9	39	452.74953345963934	NaN	0	452.749267578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_AGM(Oxidation (M))ALGIQK_	ENSG00000174851|ENST00000376901|YIF1A	94.00642277110589	0.0335199496031268	5				NaN	NaN	0	NaN	3414	3324	6738
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6741	22.561	NaN	2655.3	30	0	378.25	0.106			+	-1	VIYHCFRRLLN	11	58	497.6066660967799	1489.7981688905397	3	497.60626220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_VIYHC(Carbamidomethyl (C))FRRLLN_	REV__CACNA1B|p.P2044Lfs*125|1|0.41|ENSG00000148408|chr9:138120261-138120261|C/-|frameshift_variant;REV__ENSG00000148408|ENST00000371372|CACNA1B;REV__nc|ENSG00000148408|Q00975-2|CACNA1B	32.75053402867276	0.6462648045997152	5				NaN	NaN	0	NaN	3415	3324	6738
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6742	22.563	NaN	1685.5	30	0	463.85	0.106				-1	VTTMMMSI	8	50	465.2105892094395	NaN	0	465.2101745605469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_VTTM(Oxidation (M))MMSI_	ENSG00000163885|ENST00000352312|CFAP100;nc|ENSG00000163885|Q494V2-2|CFAP100	40.5726180659479	1.7418937515398478	5				NaN	NaN	0	NaN	3416	3324	6738
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6743	22.565	NaN	591.43	30	0	98.063	0.035	+			16278	HEGIVHDAM	9	40	504.7314453125	NaN	0	504.7314453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HEGIVHDAM_	ENSG00000005810|ENST00000544440|MYCBP2;MYCBP2|p.N3049*|1|0.11|ENSG00000005810|chr13:77097894-77097895|TT/-|frameshift_variant;MYCBP2|p.P4047Qfs*26|2|0.35|ENSG00000005810|chr13:77067782-77067782|G/-|frameshift_variant;MYCBP2|p.T4311Pfs*37|1|0.14|ENSG00000005810|chr13:77059619-77059619|G/-|frameshift_variant;MYCBP2|p.V3749*|1|0.12|ENSG00000005810|chr13:77081486-77081486|C/-|frameshift_variant;nc|ENSG00000005810|O75592-2|MYCBP2	21.9598887501803	0.3626577482100488	5				NaN	NaN	0	NaN	3417	3324	6738
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6761	22.602	NaN	83996	30	0	12354	0.215	+			4467	ATIQGAYAR	9	103	475.75609964996374	949.4976463667275	2	475.756103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATIQGAYAR_	ENSG00000109736|ENST00000355443|MFSD10;ENST00000508276.1_1_4:2933242-2933551:-|nuORF;ENST00000514031.5_1_4:2932567-2933551:-|nuORF	195.06343300570734	5.420119182691198E-05	5				NaN	NaN	0	NaN	3432	3327	6760
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6762	22.606	NaN	12441	30	0	4015.2	0.106	+			40931	SVFSDKLHSK	10	54	383.20817794600475	1146.6027044382142	3	383.2081604003906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVFSDKLHSK_	ENSG00000187257|ENST00000334955|RSBN1L;nc|ENSG00000187257|Q6PCB5-2|RSBN1L;PTPN12-RSBN1L|1|fusion;PTPN12-RSBN1L|2|fusion;PTPN12-RSBN1L|3|fusion;PTPN12-RSBN1L|4|fusion;PTPN12-RSBN1L|5|fusion;PTPN12-RSBN1L|6|fusion;PTPN12-RSBN1L|7|fusion;PTPN12-RSBN1L|8|fusion	35.17822180527639	0.5925517082438457	5				NaN	NaN	0	NaN	3433	3327	6760
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6763	22.608	NaN	2911.7	30	0	568.46	0.034	+			10264	ETLMRINA	8	58	482.249639259498	962.484725585796	2	482.249755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_ETLM(Oxidation (M))RINA_	ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1	74.25504064058377	0.37144338840759816	5				NaN	NaN	0	NaN	3434	3327	6760
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6781	22.645	NaN	4880.8	30	0	2028.5	0.214	+			22439	KTLDQAKAVLK	11	50	405.5869978251977	1213.7391640757933	3	405.58709716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTLDQAKAVLK_	ENSG00000135372|ENST00000257829|NAT10;nc|ENSG00000135372|Q9H0A0-2|NAT10	45.908116695636124	0.4771019740774998	5				NaN	NaN	0	NaN	3449	3330	6780
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6782	22.649	NaN	2542.5	30	0	1073.6	0.106			+	19119	IYLGMYLY	8	47	526.2634536749573	1050.5123544167145	2	526.2638549804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_IYLGM(Oxidation (M))YLY_	REV__ENST00000301067.11_1_12:49414036-49414432:-|nuORF	54.89457262308372	0.5523244765420926	5				NaN	NaN	0	NaN	3450	3330	6780
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6783	22.651	NaN	2095.3	30	0	348.33	0.106	+			13809	GQNIAVVGK	9	48	443.260870380984	884.507187828768	2	443.2608642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GQNIAVVGK_	ENSG00000107036|ENST00000414202|RIC1;nc|ENSG00000107036|Q4ADV7-2|RIC1;RIC1|p.M978Ifs*8|1|0.04|ENSG00000107036|chr9:5765505-5765506|-/TTGGGAA|frameshift_variant;RIC1|p.M978Nfs*6|1|0.04|ENSG00000107036|chr9:5765503-5765504|-/A|frameshift_variant	104.74654710444128	0.034358562718640136	5				NaN	NaN	0	NaN	3451	3330	6780
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6784	22.653	NaN	1141.9	30	0	235.28	0.106	+			44033	TPNEERNVM	9	43	545.2539636726842	NaN	0	545.2533569335938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TPNEERNVM_	ENSG00000184432|ENST00000333188|COPB2;nc|ENSG00000184432|P35606-2|COPB2	35.15202426646627	0.3000918603816441	5				NaN	NaN	0	NaN	3452	3330	6780
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6785	22.655	NaN	858.2	30	0	279.16	0.037				-1	MCSGSGEPAVF	11	28	571.2343139648438	NaN	0	571.2343139648438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_MC(Carbamidomethyl (C))SGSGEPAVF_	ENST00000558590.1_1_14:103394982-103395396:+|nuORF	14.864876125193954	0.456735970842152	5				NaN	NaN	0	NaN	3453	3330	6780
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6803	22.692	NaN	2202.5	30	0	635.1	0.214	+			15415	GTYHGMTLK	9	57	504.2529923378155	NaN	0	504.2529296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTYHGMTLK_	ENSG00000134371|ENST00000367435|CDC73	79.71258880314673	0.07236858429579222	5				NaN	NaN	0	NaN	3468	3333	6802
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6804	22.696	NaN	2103	30	0	914.8	0.035	+			16911	HPLEGTHEL	9	43	516.7590818423472	1031.5036107514943	2	516.7590942382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HPLEGTHEL_	ENSG00000122299|ENST00000355758|ZC3H7A;ENST00000571676.5_1_16:11858892-11864657:-|nuORF;ZC3H7A|p.I490Yfs*41|2|0.18|ENSG00000122299|chr16:11767471-11767471|T/-|frameshift_variant	45.9519527083369	0.35044536499095585	5				NaN	NaN	0	NaN	3469	3333	6802
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6822	22.733	NaN	2507.8	30	0	287.88	0.214	+			36154	SEKVDRAVL	9	50	508.7907656370698	1015.5669783409396	2	508.7913513183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEKVDRAVL_	ENSG00000123240|ENST00000378747|OPTN;nc|ENSG00000123240|Q96CV9-2|OPTN;nc|ENSG00000123240|Q96CV9-3|OPTN	60.1669710687717	0.2122228167747824	5				NaN	NaN	0	NaN	3484	3336	6821
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6823	22.736	NaN	7781.8	30	0	3659.8	0.106	+			37328	SLEEFHVFVL	10	66	407.21702995183205	1218.629260455696	3	407.21759033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLEEFHVFVL_	ENSG00000169918|ENST00000307050|OTUD7A;ENSG00000264522|ENST00000581312|OTUD7B;nc|ENSG00000169918|Q8TE49|OTUD7A;nc|ENSG00000264522|Q6GQQ9-2|OTUD7B;OTUD7A|p.L398Dfs*31|1|0.05|ENSG00000169918|chr15:31487525-31487526|-/TC|frameshift_variant;OTUD7A|p.V467Cfs*62|1|0.44|ENSG00000169918|chr15:31484676-31484676|C/-|frameshift_variant;OTUD7B|p.G523Afs*2|1|0.07|ENSG00000264522|chr1:149944821-149944821|C/-|frameshift_variant	36.446750945000026	0.5818864909973037	5				NaN	NaN	0	NaN	3485	3336	6821
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6824	22.739	NaN	2228.6	30	0	275.68	0.106	+			10769	FAGDDAPRA	9	52	460.21695980075935	NaN	0	460.2170104980469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FAGDDAPRA_	ACTA1|p.G22D|1|0.25|ENSG00000143632|chr1:229433051-229433051|C/T|missense_variant;ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196604|ENST00000409914|POTEF;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000473016.1_1_2:74120109-74129648:+|nuORF;ENST00000477812.1_1_7:5569027-5569288:-|nuORF;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000482085.1_1_10:90708534-90712518:-|nuORF;ENST00000488967.5_1_10:90706975-90712518:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;POTEE|p.N792Kfs*34|1|0.2|ENSG00000188219|chr2:131263828-131263829|-/A|frameshift_variant	79.71258880314673	0.07236858429579222	5				NaN	NaN	0	NaN	3486	3336	6821
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6825	22.74	NaN	1766.4	30	0	338.08	0.032			+	65	AAASLVQK	8	41	394.2376954164709	NaN	0	394.2378234863281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AAASLVQK_	REV__nc|ENSG00000175792|Q9Y265-2|RUVBL1	82.30502934623384	1.7418937515398478	5				NaN	NaN	0	NaN	3487	3336	6821
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6843	22.777	NaN	8438.5	30	0	1536.6	0.214	+			23090	KVVDSLYNK	9	67	533.3002100076601	1064.58586708212	2	533.3016967773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVVDSLYNK_	ENSG00000108671|ENST00000261712|PSMD11;ENST00000585265.1_1_17:30807457-30807646:+|nuORF;nc|ENSG00000108671|O00231-2|PSMD11	172.24860141594272	0.002383092361811508	5				NaN	NaN	0	NaN	3502	3339	6842
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6844	22.781	NaN	3899.6	30	0	575.55	0.106	+			35165	SAIDSVNATSK	11	61	546.7802708636646	1091.545988794129	2	546.7814331054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAIDSVNATSK_	ENSG00000111641|ENST00000322166|NOP2;ENST00000537708.1_1_12:6669555-6669804:-|nuORF;ENST00000544630.1_1_12:6669555-6669953:-|nuORF;nc|ENSG00000111641|P46087-2|NOP2;nc|ENSG00000111641|P46087-3|NOP2;nc|ENSG00000111641|P46087-4|NOP2	118.23318122614258	0.023577246283422584	5				NaN	NaN	0	NaN	3503	3339	6842
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6845	22.783	NaN	3725.5	30	0	600.26	0.106			+	33790	RQGATITVN	9	53	480.2671202652867	958.5196875973734	2	480.2675476074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RQGATITVN_	REV__ENSG00000143569|ENST00000428931|UBAP2L;REV__nc|ENSG00000143569|Q14157-1|UBAP2L;REV__nc|ENSG00000143569|Q14157-3|UBAP2L;REV__nc|ENSG00000143569|Q14157-4|UBAP2L;REV__nc|ENSG00000143569|Q14157-5|UBAP2L	49.536043120802724	0.308405419312776	5				NaN	NaN	0	NaN	3504	3339	6842
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6846	22.785	NaN	1277	30	0	143.37	0.034			+	13543	GLSLAGMASI	10	47	460.2497253417969	NaN	0	460.2497253417969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GLSLAGMASI_	REV__ENSG00000187905|ENST00000442047|LRRC74B	56.72105179125745	0.2610545891966633	5				NaN	NaN	0	NaN	3505	3339	6842
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6864	22.822	NaN	3123.4	30	0	489.9	0.214	+			19900	KEFDGKSL	8	58	462.2452054747211	922.4758580162422	2	462.24493408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEFDGKSL_	ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;ENST00000517330.1_1_5:77337712-77337985:-|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P;nc|ENSG00000205940|Q58FF8|HSP90AB2P;nc|ENSG00000282100|Q58FF6|HSP90AB4P	106.68306549817024	0.24699173477327382	5				NaN	NaN	0	NaN	3520	3342	6863
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6865	22.826	NaN	6034.3	30	0	653.91	0.106	+			16434	HESGASIKI	9	67	471.2557384922066	940.4969240512132	2	471.2540588378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HESGASIKI_	ENSG00000165119|ENST00000376263|HNRNPK;HNRNPK|p.R414C|1|0.56|ENSG00000165119|chr9:83970283-83970283|G/A|missense_variant;nc|ENSG00000165119|P61978-3|HNRNPK;nc|ENSG00000165119|P61978|HNRNPK	127.46168284122857	0.016682644177004526	5				NaN	NaN	0	NaN	3521	3342	6863
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6866	22.827	NaN	2989.2	30	0	717.37	0.034	+			33442	RILACGVAK	9	59	465.7811348763053	929.5477168194107	2	465.7813720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RILACGVAK_	ENSG00000265972|ENST00000582401|TXNIP	39.252832667884924	0.4290233611298554	5				NaN	NaN	0	NaN	3522	3342	6863
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6884	22.865	NaN	27420	30	0	11909	0.214	+			13832	GQSDIAITK	9	73	466.7558933775334	931.4972338218669	2	466.7558898925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GQSDIAITK_	ENSG00000104738|ENST00000649973|MCM4	154.0112374973812	0.005934173778894772	5				NaN	NaN	0	NaN	3537	3345	6883
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6885	22.869	NaN	9963.5	30	0	3410.6	0.106	+			45297	TVSADPVVK	9	59	458.26067468156856	NaN	0	458.2607727050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVSADPVVK_	ENSG00000136051|ENST00000332180|WASHC4	60.11826168202944	0.14881452885248947	5				NaN	NaN	0	NaN	3538	3345	6883
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6886	22.871	NaN	4603.7	30	0	1835.6	0.106	+			4364	ATGSVFTGK	9	48	434.2319558835346	866.4493588338693	2	434.23211669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATGSVFTGK_	ENSG00000126790|ENST00000247194|L3HYPDH	96.0336014099291	0.047854655524928534	5				NaN	NaN	0	NaN	3539	3345	6883
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6887	22.872	NaN	683.17	30	0	64.177	0.033	+			49354	VVSQPSQAS	9	44	451.7323303222656	NaN	0	451.7323303222656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVSQPSQAS_	ENST00000467107.1_1_6:31082567-31082642:+|nuORF	27.882242232435846	0.3367954786602879	5				NaN	NaN	0	NaN	3540	3345	6883
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6905	22.909	NaN	692.15	30	0	78.386	0.214	+			21689	KQELVEKP	8	42	485.7815246582031	NaN	0	485.7815246582031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KQELVEKP_	CACNA1C|p.A2072Pfs*18|1|0.55|ENSG00000151067|chr12:2688729-2688729|G/-|frameshift_variant;CACNA1C|p.E1194Gfs*8|1|0.17|ENSG00000151067|chr12:2608669-2608670|-/G|frameshift_variant;CACNA1C|p.P2073Qfs*17|1|0.21|ENSG00000151067|chr12:2688733-2688733|C/-|frameshift_variant;ENSG00000151067|ENST00000399655|CACNA1C;nc|ENSG00000151067|Q13936-10|CACNA1C;nc|ENSG00000151067|Q13936-11|CACNA1C;nc|ENSG00000151067|Q13936-13|CACNA1C;nc|ENSG00000151067|Q13936-14|CACNA1C;nc|ENSG00000151067|Q13936-15|CACNA1C;nc|ENSG00000151067|Q13936-16|CACNA1C;nc|ENSG00000151067|Q13936-17|CACNA1C;nc|ENSG00000151067|Q13936-18|CACNA1C;nc|ENSG00000151067|Q13936-19|CACNA1C;nc|ENSG00000151067|Q13936-2|CACNA1C;nc|ENSG00000151067|Q13936-20|CACNA1C;nc|ENSG00000151067|Q13936-21|CACNA1C;nc|ENSG00000151067|Q13936-22|CACNA1C;nc|ENSG00000151067|Q13936-23|CACNA1C;nc|ENSG00000151067|Q13936-24|CACNA1C;nc|ENSG00000151067|Q13936-25|CACNA1C;nc|ENSG00000151067|Q13936-26|CACNA1C;nc|ENSG00000151067|Q13936-27|CACNA1C;nc|ENSG00000151067|Q13936-28|CACNA1C;nc|ENSG00000151067|Q13936-29|CACNA1C;nc|ENSG00000151067|Q13936-3|CACNA1C;nc|ENSG00000151067|Q13936-30|CACNA1C;nc|ENSG00000151067|Q13936-31|CACNA1C;nc|ENSG00000151067|Q13936-32|CACNA1C;nc|ENSG00000151067|Q13936-33|CACNA1C;nc|ENSG00000151067|Q13936-34|CACNA1C;nc|ENSG00000151067|Q13936-35|CACNA1C;nc|ENSG00000151067|Q13936-36|CACNA1C;nc|ENSG00000151067|Q13936-37|CACNA1C;nc|ENSG00000151067|Q13936-4|CACNA1C;nc|ENSG00000151067|Q13936-5|CACNA1C;nc|ENSG00000151067|Q13936-6|CACNA1C;nc|ENSG00000151067|Q13936-7|CACNA1C;nc|ENSG00000151067|Q13936-8|CACNA1C;nc|ENSG00000151067|Q13936-9|CACNA1C;nc|ENSG00000151067|Q13936|CACNA1C	39.252832667884924	1.7418937515398478	5				NaN	NaN	0	NaN	3555	3348	6904
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6906	22.913	NaN	641.62	30	0	188.45	0.036			+	13315	GKHAGSLSGWG	11	25	528.765380859375	NaN	0	528.765380859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GKHAGSLSGWG_	REV__ENST00000376726.3_1_20:25039268-25039349:-|nuORF	20.94693142431847	0.456735970842152	5				NaN	NaN	0	NaN	3556	3348	6904
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6924	22.95	NaN	9832	30	0	2654.6	0.214	+			5676	AVDTAYVAK	9	61	469.2535980523624	936.4926431715248	2	469.25323486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVDTAYVAK_	ENSG00000174851|ENST00000376901|YIF1A;ENST00000376899.8_1_11:66054976-66056456:-|nuORF;YIF1A|p.R131Gfs*50|3|0.43|ENSG00000174851|chr11:66287634-66287634|G/-|frameshift_variant	124.08010499294276	0.018729767491916592	5				NaN	NaN	0	NaN	3571	3351	6923
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6925	22.953	NaN	1727.6	30	0	579.6	0.034	+			41950	SVVSSVTTK	9	37	454.258186146077	NaN	0	454.25830078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVVSSVTTK_	ENSG00000135124|ENST00000337233|P2RX4;ENST00000499638.6_1_12:121647946-121660004:+|nuORF;nc|ENSG00000135124|Q99571-2|P2RX4;nc|ENSG00000135124|Q99571-3|P2RX4;P2RX4|p.T223Qfs*13|1|0.34|ENSG00000135124|chr12:121228783-121228783|A/-|frameshift_variant	42.86426827375447	0.2558691296974908	5				NaN	NaN	0	NaN	3572	3351	6923
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6943	22.99	NaN	1385.9	30	0	343.2	0.214	+			41539	SVQCMPVAK	9	49	510.2539824295415	1018.493411925883	2	510.25482177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SVQC(Carbamidomethyl (C))MPVAK_	ENSG00000160877|ENST00000292431|NACC1	54.722347961057174	0.257609425301511	5				NaN	NaN	0	NaN	3587	3354	6942
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6944	22.994	NaN	3110.5	30	0	1525.7	0.035	+			5812	AVIENLPKK	9	26	337.87810965783206	1010.6124995736961	3	337.8782043457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVIENLPKK_	DDX10|p.I301Nfs*59|1|0.09|ENSG00000178105|chr11:108688982-108688983|-/A|frameshift_variant;ENSG00000178105|ENST00000322536|DDX10	39.252832667884924	0.4290233611298554	5				NaN	NaN	0	NaN	3588	3354	6942
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6961	23.029	NaN	3386.4	30	0	603.64	0.214				-1	 	0	53	589.5949468060803	1765.763011018441	3	589.5951538085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3602	3357	6960
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6962	23.033	NaN	1727.7	30	0	174.56	0.106	+			35932	SEGIKHVL	8	51	441.75592189864165	881.4972908640833	2	441.7559814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEGIKHVL_	ENSG00000165475|ENST00000298248|CRYL1;nc|ENSG00000165475|Q9Y2S2-2|CRYL1	71.29570347882199	0.39610197767395533	5				NaN	NaN	0	NaN	3603	3357	6960
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6963	23.035	NaN	1077.9	30	0	131.59	0.106			+	38316	SRDKCFTPF	9	45	550.761474609375	NaN	0	550.761474609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SRDKCFTPF_	REV__ENST00000598913.5_1_19:39874412-39874778:+|nuORF	44.116797842482775	0.2472372736944149	5				NaN	NaN	0	NaN	3604	3357	6960
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6964	23.036	NaN	723.63	30	0	134.01	0.035	+			1199	AEPQLLDTH	9	44	512.2603759765625	NaN	0	512.2603759765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEPQLLDTH_	ENSG00000175213|ENST00000311764|ZNF408	27.882242232435846	0.3367954786602879	5				NaN	NaN	0	NaN	3605	3357	6960
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6982	23.074	NaN	2089	30	0	244.03	0.214			+	-1	KCGKQLLQK	9	63	551.8237818503806	1101.633010767561	2	551.8250732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_KC(Carbamidomethyl (C))GKQLLQK_	REV__ENST00000396355.5_1_16:15818353-15818767:+|nuORF	51.33545320467046	0.2872990594074956	5				NaN	NaN	0	NaN	3620	3360	6981
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6983	23.078	NaN	2021.3	30	0	511.51	0.106	+			4500	ATITERGITSR	11	39	402.2264709472656	NaN	0	402.2264709472656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATITERGITSR_	EMC1|p.F974Lfs*4|1|0.22|ENSG00000127463|chr1:19219363-19219363|A/-|frameshift_variant;ENSG00000127463|ENST00000477853|EMC1;nc|ENSG00000127463|Q8N766-2|EMC1;nc|ENSG00000127463|Q8N766-3|EMC1;nc|ENSG00000127463|Q8N766-4|EMC1	42.33807565288922	0.3703495330385095	5				NaN	NaN	0	NaN	3621	3360	6981
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6984	23.08	NaN	2008.1	30	0	331.75	0.106	+			19737	KDVEQRLI	8	52	500.7934253638047	NaN	0	500.7933654785156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KDVEQRLI_	tr|U7SGD6|U7SGD6_FUSNULysMdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02265PE=4SV=1	74.25504064058377	1.7418937515398478	5				NaN	NaN	0	NaN	3622	3360	6981
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6985	23.082	NaN	964.78	30	0	114.42	0.106	+			34626	RVQDYIQSK	9	44	568.8067510324853	1135.5989491317705	2	568.8073120117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RVQDYIQSK_	ENSG00000123836|ENST00000367080|PFKFB2;ENST00000411990.6_1_1:207235951-207252361:+|nuORF;nc|ENSG00000123836|O60825-2|PFKFB2	59.93077597824379	0.21419174904018318	5				NaN	NaN	0	NaN	3623	3360	6981
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6986	23.083	NaN	997.66	30	0	380.62	0.034	+			26670	LVFTSKQS	8	27	455.25535249678074	NaN	0	455.25537109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LVFTSKQS_	ENST00000320650.8_1_4:142640610-142641689:+|nuORF	24.20275056022122	1.7418937515398478	5				NaN	NaN	0	NaN	3624	3360	6981
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7004	23.12	NaN	2601.6	30	0	981.48	0.214	+			4507	ATITKVLQK	9	31	334.54998779296875	NaN	0	334.54998779296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATITKVLQK_	ENSG00000130589|ENST00000467148|HELZ2;HELZ2|p.D1312G|1|0.12|ENSG00000130589|chr20:63564887-63564887|T/C|missense_variant;HELZ2|p.G2213Vfs*22|1|0.14|ENSG00000130589|chr20:63561876-63561876|C/-|frameshift_variant;HELZ2|p.R2206Vfs*29|2|0.28|ENSG00000130589|chr20:63561898-63561898|G/-|frameshift_variant;nc|ENSG00000130589|Q9BYK8-2|HELZ2;nc|ENSG00000130589|Q9BYK8|HELZ2	23.04248740728303	0.3589936788096251	5				NaN	NaN	0	NaN	3639	3363	7003
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7005	23.124	NaN	1218.9	30	0	505.69	0.106			+	-1	QNSIVTFCP	9	42	533.2571048259329	NaN	0	533.2572021484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_QNSIVTFC(Carbamidomethyl (C))P_	REV__ENSG00000166147|ENST00000316623|FBN1	66.42927471994793	0.121898005645852	5				NaN	NaN	0	NaN	3640	3363	7003
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7006	23.126	NaN	2394.1	30	0	556.63	0.035	+			40257	STSLLGALQS	10	39	488.7692074193963	975.5238619055926	2	488.7693786621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STSLLGALQS_	ENSG00000143952|ENST00000272322|VPS54;nc|ENSG00000143952|Q9P1Q0-2|VPS54;nc|ENSG00000143952|Q9P1Q0-3|VPS54;nc|ENSG00000143952|Q9P1Q0-4|VPS54	42.86426827375447	0.522752283233888	5				NaN	NaN	0	NaN	3641	3363	7003
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7023	23.161	NaN	1192.8	30	0	188.69	0.141	+			5775	AVGPPTTVR	9	52	449.26078860498654	896.5070242767731	2	449.2615966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVGPPTTVR_	ENSG00000137573|ENST00000402687|SULF1;ENST00000521946.5_1_8:70505207-70554528:+|nuORF	35.61828744233558	0.47037581924408073	5				NaN	NaN	0	NaN	3655	3366	7022
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7040	23.197	NaN	17022	30	0	3986.7	0.214	+			16156	HEAERNIAL	9	75	526.7774564861843	1051.5403600391685	2	526.7787475585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HEAERNIAL_	ENSG00000015568|ENST00000016946|RGPD5;ENSG00000153165|ENST00000409886|RGPD3;ENSG00000153201|ENST00000283195|RANBP2;ENSG00000169629|ENST00000302558|RGPD8;ENSG00000183054|ENST00000329516|RGPD6;ENSG00000185304|ENST00000398146|RGPD2;ENSG00000187627|ENST00000641458|RGPD1;ENSG00000196862|ENST00000408999|RGPD4;nc|ENSG00000183054|Q99666-2|RGPD5;nc|ENSG00000187627|P0DJD0|RGPD1;nc|ENSG00000196862|Q7Z3J3-2|RGPD4;RANBP2|p.A864Lfs*3|1|0.3|ENSG00000153201|chr2:108758533-108758533|G/-|frameshift_variant;RANBP2|p.C2737Vfs*35|1|0.18|ENSG00000153201|chr2:108772957-108772957|T/-|frameshift_variant;RANBP2|p.F3068Lfs*10|1|0.06|ENSG00000153201|chr2:108782692-108782692|T/-|frameshift_variant;RANBP2|p.H3114Sfs*18|1|0.33|ENSG00000153201|chr2:108782827-108782828|-/T|frameshift_variant;RANBP2|p.K1989Nfs*9|1|0.05|ENSG00000153201|chr2:108766505-108766506|-/TATCCTG|frameshift_variant;RANBP2|p.K2576Nfs*63|2|0.22|ENSG00000153201|chr2:108768262-108768262|A/-|frameshift_variant;RANBP2|p.S1486Rfs*51|1|0.05|ENSG00000153201|chr2:108764996-108764997|-/ATTTTGTATTC|frameshift_variant;RGPD2|p.F1350Lfs*25|1|0.25|ENSG00000185304|chr2:87782974-87782974|A/-|frameshift_variant;RGPD3|p.V1441*|1|0.45|ENSG00000153165|chr2:106423647-106423647|T/-|frameshift_variant;RGPD4|p.K568Nfs*33|1|0.14|ENSG00000196862|chr2:107859787-107859787|A/-|frameshift_variant	120.8684288430529	0.02067403653475984	5				NaN	NaN	0	NaN	3669	3369	7039
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7041	23.201	NaN	34898	30	0	10442	0.106	+			44864	TTVDIFHKK	9	72	363.54123990629705	1087.6018903190911	3	363.5414733886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTVDIFHKK_	ENSG00000158411|ENST00000289359|MITD1	54.722347961057174	0.257609425301511	5				NaN	NaN	0	NaN	3670	3369	7039
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7042	23.203	NaN	2089.3	30	0	408.76	0.106	+			8509	EATKAVTEM	9	49	490.2418123819918	978.4690718307836	2	490.2419128417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EATKAVTEM_	ENSG00000070756|ENST00000318607|PABPC1;ENSG00000090621|ENST00000372858|PABPC4;ENSG00000101104|ENST00000217073|PABPC1L;ENSG00000151846|ENST00000281589|PABPC3;ENST00000476056.5_1_20:43550276-43561823:+|nuORF;ENST00000490798.5_1_20:43550276-43564067:+|nuORF;nc|ENSG00000070756|P11940-2|PABPC1;nc|ENSG00000090621|Q13310-2|PABPC4;nc|ENSG00000090621|Q13310|PABPC4;nc|ENSG00000101104|Q4VXU2|PABPC1L	129.68262048586715	0.015338143639892752	5				NaN	NaN	0	NaN	3671	3369	7039
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7043	23.205	NaN	1998.8	30	0	156.82	0.106	+			40803	SVDVHQVYK	9	65	537.7823063251911	1073.5500597171822	2	537.7841186523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVDVHQVYK_	ENSG00000186314|ENST00000683046|PRELID2;ENST00000394450.6_1_5:145205751-145214847:-|nuORF;ENST00000515475.1_1_5:145199495-145214847:-|nuORF;nc|ENSG00000186314|Q8N945|PRELID2;PRELID2|p.N28Tfs*10|1|0.28|ENSG00000186314|chr5:145823129-145823129|G/-|frameshift_variant	79.71258880314673	0.09879134589249085	5				NaN	NaN	0	NaN	3672	3369	7039
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7044	23.206	NaN	1587.6	30	0	453.59	0.106	+			51473	YVHDDGRVSY	10	51	605.778124920427	NaN	0	605.7782592773438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YVHDDGRVSY_	ENSG00000130755|ENST00000597595|GMFG;ENST00000601731.1_1_19:39819119-39826633:-|nuORF	66.96192283764107	0.17742606645642828	5				NaN	NaN	0	NaN	3673	3369	7039
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7045	23.208	NaN	1428.8	30	0	379.48	0.037	+			36839	SIFEPAKGGEK	11	42	581.8087662823067	1161.6029796314133	2	581.8099365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SIFEPAKGGEK_	ENSG00000160710|ENST00000368474|ADAR;nc|ENSG00000160710|P55265-2|ADAR;nc|ENSG00000160710|P55265-3|ADAR;nc|ENSG00000160710|P55265-4|ADAR;nc|ENSG00000160710|P55265-5|ADAR	79.03558427241974	0.16041291136517336	5				NaN	NaN	0	NaN	3674	3369	7039
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7063	23.246	NaN	4470.1	30	0	1363.3	0.214	+			49364	VVSSTVVTAA	10	56	467.2660783407565	932.517603748313	2	467.26568603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVSSTVVTAA_	ENST00000372504.5_2_1:43314964-43315012:+|nuORF	58.78195531508484	0.37691818691852547	5				NaN	NaN	0	NaN	3689	3372	7062
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7064	23.249	NaN	6014.6	30	0	3093.5	0.106	+			335	AAPTVRAPA	9	49	427.24795176261404	852.4813505920281	2	427.2476806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAPTVRAPA_	ENST00000428449.5_1_7:121945734-121946145:+|nuORF	29.14955571784316	0.5308295550522326	5				NaN	NaN	0	NaN	3690	3372	7062
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7065	23.251	NaN	3145.8	30	0	1502.5	0.106			+	32059	QRWTRAPR	8	44	357.5377187247644	NaN	0	357.5376892089844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QRWTRAPR_	REV__ENST00000578692.1_1_17:29124415-29151644:-|nuORF	19.359975847455235	1.7418937515398478	5				NaN	NaN	0	NaN	3691	3372	7062
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7066	23.253	NaN	1151.9	30	0	199.39	0.106			+	7714	DLRPAYLV	8	51	473.7731018066406	NaN	0	473.7731018066406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DLRPAYLV_	REV__ENSG00000105376|ENST00000221980|ICAM5;REV__ICAM5|p.P756Lfs*12|1|0.13|ENSG00000105376|chr19:10295378-10295378|C/-|frameshift_variant	33.51558372728122	1.7418937515398478	5				NaN	NaN	0	NaN	3692	3372	7062
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7067	23.255	NaN	4682.3	30	0	854.09	0.106	+			4626	ATLNVSTTR	9	58	481.7665617910113	961.5185706488227	2	481.76678466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATLNVSTTR_	ENSG00000088448|ENST00000267339|ANKRD10;ENST00000460846.1_1_13:111557570-111567134:-|nuORF;nc|ENSG00000088448|Q9NXR5-2|ANKRD10	109.82975700811294	0.02917171107062681	5				NaN	NaN	0	NaN	3693	3372	7062
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7068	23.257	NaN	1634.6	30	0	240.57	0.036	+			15976	HAIMRSPQM	9	43	535.7647732675916	1069.5149936019832	2	535.7651977539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HAIMRSPQM_	CTNNB1|p.L301Hfs*16|1|0.05|ENSG00000168036|chr3:41225827-41225831|TTCAA/-|frameshift_variant;CTNNB1|p.M271Wfs*5|1|0.08|ENSG00000168036|chr3:41225733-41225733|A/-|frameshift_variant;ENSG00000168036|ENST00000349496|CTNNB1	63.53385203322761	0.18415635464017938	5				NaN	NaN	0	NaN	3694	3372	7062
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7086	23.294	NaN	12015	30	0	3386.8	0.214	+			4490	ATITDKELLKK	11	82	420.59060242807425	1258.7499778844228	3	420.5907287597656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATITDKELLKK_	ENSG00000131503|ENST00000360839|ANKHD1;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	96.75553188499661	0.07111942461817355	5				NaN	NaN	0	NaN	3709	3375	7085
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7087	23.298	NaN	23194	30	0	11728	0.106	+			23611	LAPGQVPN	8	46	398.2214208380104	794.4282887428208	2	398.22186279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LAPGQVPN_	ENSG00000164116|ENST00000506455|GUCY1A1;ENST00000512983.5_1_4:156617950-156632415:+|nuORF;nc|ENSG00000164116|Q02108-2|GUCY1A1	65.89745868150666	0.44339748671293633	5				NaN	NaN	0	NaN	3710	3375	7085
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7088	23.3	NaN	2317	30	0	1301.5	0.033	+			320	AAPSAAREL	9	43	443.24244414740036	884.4703353616007	2	443.2434997558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AAPSAAREL_	ENSG00000107960|ENST00000224950|STN1	62.107414245175825	0.1960472003779324	5				NaN	NaN	0	NaN	3711	3375	7085
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7106	23.336	NaN	4302.5	30	0	833	0.215	+			39137	SSVGSVITK	9	53	439.2524862004577	876.4904194677155	2	439.25274658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSVGSVITK_	ENSG00000076554|ENST00000518937|TPD52;ENST00000517445.5_1_8:80962678-80964851:-|nuORF;ENST00000521354.5_1_8:80950353-81083761:-|nuORF;ENST00000522364.5_1_8:80963727-80992703:-|nuORF;nc|ENSG00000076554|P55327-2|TPD52;nc|ENSG00000076554|P55327-3|TPD52;nc|ENSG00000076554|P55327-5|TPD52;nc|ENSG00000076554|P55327-6|TPD52;nc|ENSG00000076554|P55327-7|TPD52;nc|ENSG00000076554|P55327|TPD52;TPD52|p.K164Sfs*5|1|0.09|ENSG00000076554|chr8:80051542-80051542|T/-|frameshift_variant	82.7504851949679	0.08565546331141553	5				NaN	NaN	0	NaN	3726	3378	7105
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7107	23.34	NaN	1076.2	30	0	244.33	0.106			+	9261	EGWLSLPL	8	41	457.7507475758554	NaN	0	457.7505798339844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EGWLSLPL_	REV__CMYA5|p.I3735Hfs*2|1|0.08|ENSG00000164309|chr5:79758842-79758843|-/T|frameshift_variant;REV__CMYA5|p.K1823Rfs*17|2|0.34|ENSG00000164309|chr5:79734227-79734227|A/-|frameshift_variant;REV__CMYA5|p.N2399Ifs*16|1|0.46|ENSG00000164309|chr5:79735957-79735957|A/-|frameshift_variant;REV__CMYA5|p.P4051Nfs*8|1|0.05|ENSG00000164309|chr5:79799555-79799561|AACCTGG/-|frameshift_variant;REV__CMYA5|p.S3683Pfs*17|1|0.14|ENSG00000164309|chr5:79752728-79752728|T/-|frameshift_variant;REV__ENSG00000164309|ENST00000446378|CMYA5	33.51558372728122	1.7418937515398478	5				NaN	NaN	0	NaN	3727	3378	7105
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7108	23.342	NaN	1316.8	30	0	346.55	0.106	+			51071	YLMLVNDY	8	37	515.7506133198823	1029.4866737065645	2	515.7507934570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YLMLVNDY_	ADGRG7|p.D695Y|1|0.39|ENSG00000144820|chr3:100669052-100669052|G/T|missense_variant	30.503639358989545	0.7238069182250283	5				NaN	NaN	0	NaN	3728	3378	7105
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7109	23.343	NaN	1005.5	30	0	119.01	0.106			+	8314	EAKADAIL	8	41	415.7343444824219	NaN	0	415.7343444824219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EAKADAIL_	REV__SLK|p.E306D|1|0.29|ENSG00000065613|chr10:104001497-104001497|G/T|missense_variant	34.172542307311794	1.7418937515398478	5				NaN	NaN	0	NaN	3729	3378	7105
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7110	23.345	NaN	669.73	30	0	75.377	0.047				-1	 	0	39	595.5986150400635	NaN	0	595.5978393554688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3730	3378	7105
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7128	23.383	NaN	4454.9	30	0	621.2	0.214	+			34501	RVFTGVVTK	9	71	503.8057901574639	1005.5970273817278	2	503.80560302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVFTGVVTK_	CCAR1|p.E816Kfs*75|1|0.25|ENSG00000060339|chr10:68771347-68771347|A/-|frameshift_variant;CCAR1|p.Q181Kfs*2|1|0.31|ENSG00000060339|chr10:68747178-68747178|C/-|frameshift_variant;CCAR1|p.S739Vfs*11|1|0.47|ENSG00000060339|chr10:68765992-68765992|A/-|frameshift_variant;ENSG00000060339|ENST00000265872|CCAR1;nc|ENSG00000060339|Q8IX12-2|CCAR1	61.691277971877994	0.19951612995419254	5				NaN	NaN	0	NaN	3745	3381	7127
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7129	23.387	NaN	3296.7	30	0	362.06	0.106	+			43209	TEVKAVKL	8	62	444.28105187647947	886.547550819759	2	444.2814025878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEVKAVKL_	ENSG00000141580|ENST00000392325|WDR45B;ENST00000574828.1_1_17:80584850-80606216:-|nuORF;ENST00000583470.1_1_17:30439049-30439436:-|nuORF	64.20726635412375	0.4601301477144759	5				NaN	NaN	0	NaN	3746	3381	7127
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7130	23.389	NaN	1906.3	30	0	332.64	0.106			+	13880	GRAKEELF	8	52	475.2586202537113	NaN	0	475.25860595703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GRAKEELF_	REV__ENSG00000072195|ENST00000312358|SPEG;REV__nc|ENSG00000072195|Q15772-1|SPEG;REV__SPEG|p.R3177Pfs*3|1|0.2|ENSG00000072195|chr2:219492170-219492171|-/G|frameshift_variant	42.47446043378293	1.7418937515398478	5				NaN	NaN	0	NaN	3747	3381	7127
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7131	23.39	NaN	1290	30	0	280.77	0.035			+	21263	KLMPFLLE	8	51	495.7865922956423	989.5586316580847	2	495.7865905761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KLMPFLLE_	REV__ENST00000481102.5_1_1:85124114-85127897:-|nuORF	31.954861631926434	0.7126016770032289	5				NaN	NaN	0	NaN	3748	3381	7127
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7149	23.428	NaN	4052.2	30	0	2014.3	0.214	+			25945	LSHTNILM	8	52	464.74961512762815	927.4846773220563	2	464.7493591308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSHTNILM_	ENSG00000239732|ENST00000360658|TLR9;nc|ENSG00000239732|Q9NR96-2|TLR9;nc|ENSG00000239732|Q9NR96-3|TLR9;nc|ENSG00000239732|Q9NR96-4|TLR9;nc|ENSG00000239732|Q9NR96-5|TLR9;TLR9|p.G719Afs*37|1|0.18|ENSG00000239732|chr3:52222162-52222162|G/-|frameshift_variant	88.64286706044652	0.2815785716369046	5				NaN	NaN	0	NaN	3763	3384	7148
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7150	23.432	NaN	5706.6	30	0	856.2	0.106				-1	FCIHRHPISI	10	41	427.2298010690017	1278.6675738072051	3	427.22967529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_FC(Carbamidomethyl (C))IHRHPISI_	ENST00000330817.10_1_22:50296904-50297255:-|nuORF	22.579656572578934	0.6954366826851017	5				NaN	NaN	0	NaN	3764	3384	7148
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7151	23.434	NaN	1779.4	30	0	325.78	0.106	+			26488	LTLTGALH	8	42	413.24497986169905	824.4754067901981	2	413.2450256347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LTLTGALH_	ENSG00000114841|ENST00000420323|DNAH1;ENST00000486752.5_1_3:52350520-52422757:+|nuORF;nc|ENSG00000114841|Q9P2D7-6|DNAH1;nc|ENSG00000114841|Q9P2D7-8|DNAH1	54.76467175910256	0.5536104764165384	5				NaN	NaN	0	NaN	3765	3384	7148
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7152	23.435	NaN	1583.8	30	0	555.88	0.035			+	25617	LQPEKSADK	9	51	508.27501194480067	NaN	0	508.2743225097656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LQPEKSADK_	REV__nc|ENSG00000129682|Q92913-4|FGF13	27.882242232435846	0.3367954786602879	5				NaN	NaN	0	NaN	3766	3384	7148
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7170	23.472	NaN	2789.8	30	0	168.91	0.214	+			40762	SVDKLVIQK	9	67	515.3191919904012	1028.6238310476024	2	515.3198852539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVDKLVIQK_	ENST00000523612.1_1_8:142469282-142469963:+|nuORF	83.6470233535746	0.08277643980271215	5				NaN	NaN	0	NaN	3781	3387	7169
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7171	23.476	NaN	1018.3	30	0	132.91	0.034	+			42786	TEAHGLARL	9	45	484.269755263199	NaN	0	484.26995849609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEAHGLARL_	ENSG00000123989|ENST00000243776|CHPF;nc|ENSG00000123989|Q8IZ52-4|CHPF	49.44154591367651	0.21054156626303966	5				NaN	NaN	0	NaN	3782	3387	7169
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7189	23.512	NaN	4173.6	30	0	697.52	0.214			+	9220	EGSIGTLLN	9	57	452.2424114234703	902.4702699137406	2	453.24774169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EGSIGTLLN_	REV__ENST00000477927.1_1_2:33749528-33755971:+|nuORF	35.61828744233558	0.47037581924408073	5				NaN	NaN	0	NaN	3797	3390	7188
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7190	23.516	NaN	4685.1	30	0	2431.9	0.036	+			10519	EVYHTTVLK	9	56	545.3005632365127	1088.5865735398254	2	545.3029174804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EVYHTTVLK_	ENST00000396185.7_1_3:41241009-41266025:+|nuORF;ENST00000453024.5_1_3:41241021-41265725:+|nuORF	49.44154591367651	0.3095138337212152	5				NaN	NaN	0	NaN	3798	3390	7188
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7208	23.552	NaN	72792	30	0	38336	0.214	+			32496	QVQAAQFAK	9	71	495.7717961615107	989.5290393898214	2	495.7718505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QVQAAQFAK_	ENSG00000135441|ENST00000548925|BLOC1S1;nc|ENSG00000135441|P78537-2|BLOC1S1	157.20854538584396	0.0051889325717705	5				NaN	NaN	0	NaN	3813	3393	7207
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7209	23.556	NaN	19385	30	0	6847	0.106	+			18031	IINSSITTK	9	66	488.78679292322886	975.5590329132577	2	488.7872009277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IINSSITTK_	CCT3|p.A379Lfs*9|1|0.21|ENSG00000163468|chr1:156312061-156312061|C/-|frameshift_variant;CCT3|p.K197Nfs*23|1|0.17|ENSG00000163468|chr1:156320857-156320857|T/-|frameshift_variant;CCT3|p.L350Ffs*9|1|0.49|ENSG00000163468|chr1:156312146-156312147|-/A|frameshift_variant;ENSG00000163468|ENST00000295688|CCT3;nc|ENSG00000163468|P49368-2|CCT3	145.46060221211434	0.007927189773590037	5				NaN	NaN	0	NaN	3814	3393	7207
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7210	23.558	NaN	5295.1	30	0	787.11	0.106	+			16472	HETGTKITI	9	68	500.27712111544423	998.5396892976885	2	500.2772521972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HETGTKITI_	ENSG00000073792|ENST00000382199|IGF2BP2;ENST00000496495.1_1_3:185393074-185393625:-|nuORF;ENST00000550858.1_1_12:42681476-42682067:+|nuORF;nc|ENSG00000073792|Q9Y6M1-1|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-3|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-4|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-5|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-6|IGF2BP2	101.60071028292904	0.0375685401170269	5				NaN	NaN	0	NaN	3815	3393	7207
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7211	23.56	NaN	10891	30	0	6964.2	0.106	+			47972	VSPDAKTSL	9	50	459.2507244096732	916.4868958861464	2	459.25048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSPDAKTSL_	ENSG00000080200|ENST00000389622|CRYBG3	46.45678178249821	0.34452392205506005	5				NaN	NaN	0	NaN	3816	3393	7207
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7212	23.562	NaN	945.19	30	0	59.128	0.106	+			38006	SPLKTTSSY	9	47	492.2558288574219	NaN	0	492.2558288574219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SPLKTTSSY_	ENSG00000124429|ENST00000262753|POF1B;nc|ENSG00000124429|Q8WVV4-1|POF1B;nc|ENSG00000124429|Q8WVV4-3|POF1B;POF1B|p.T130Lfs*12|1|0.14|ENSG00000124429|chrX:85359600-85359601|-/AG|frameshift_variant	72.87924865735499	0.09578366712754152	5				NaN	NaN	0	NaN	3817	3393	7207
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7213	23.563	NaN	2752.4	30	0	427.93	0.035			+	7236	DALHVKGKY	9	59	515.7873671132135	1029.5601812932268	2	515.7881469726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DALHVKGKY_	REV__sp|P16793|UL52_HCMVAPackagingproteinUL32homologOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL52PE=3SV=1;REV__sp|Q6SW79|UL52_HCMVMPackagingproteinUL32homologOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL52PE=3SV=1	49.44154591367651	0.3095138337212152	5				NaN	NaN	0	NaN	3818	3393	7207
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7230	23.599	NaN	10918	30	0	2690.2	0.214	+			39409	STDPSVLGK	9	64	452.2424114234703	902.4702699137406	2	452.2425231933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STDPSVLGK_	ENSG00000114315|ENST00000232424|HES1;HES1|p.Y110C|1|0.27|ENSG00000114315|chr3:194137719-194137719|A/G|missense_variant	77.31757898189308	0.1091473830098891	5				NaN	NaN	0	NaN	3832	3396	7229
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7231	23.602	NaN	2165.4	30	0	193	0.106	+			37933	SPEEGARVY	9	57	504.2430656992222	1006.4715784652444	2	504.2430419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SPEEGARVY_	ENSG00000131037|ENST00000201647|EPS8L1;ENST00000587715.1_1_19:55598611-55598979:+|nuORF;ENST00000589362.5_1_19:55593317-55598979:+|nuORF;EPS8L1|p.A674V|1|0.11|ENSG00000131037|chr19:55087371-55087371|C/T|missense_variant;nc|ENSG00000131037|Q8TE68-2|EPS8L1;nc|ENSG00000131037|Q8TE68-4|EPS8L1	87.69643885390035	0.07135982304947239	5				NaN	NaN	0	NaN	3833	3396	7229
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7232	23.604	NaN	1384.1	30	0	589.86	0.038	+			33772	RPWRATLAAE	10	31	390.8828856520897	NaN	0	390.548583984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RPWRATLAAE_	ENSG00000175262|ENST00000377004|C1orf127;nc|nan|Q8N9H9-2|C1orf127;nc|nan|Q8N9H9|C1orf127	21.9598887501803	0.4201028297492154	5				NaN	NaN	0	NaN	3834	3396	7229
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7246	23.634	NaN	5090.1	30	0	1063	0.214	+			48776	VTYHMFRTK	9	47	394.87510819321966	1181.603495179859	3	394.8750915527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTYHMFRTK_	ENST00000453465.1_1_10:21915067-21915193:-|nuORF;ENST00000478691.5_1_1:23664326-23665089:-|nuORF	30.317721548370564	0.5199124245378496	5				NaN	NaN	0	NaN	3845	3399	7245
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7247	23.638	NaN	660.57	30	0	106.08	0.106	+			39357	STCNDLIAK	9	44	511.2525634765625	NaN	0	511.2525634765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_STC(Carbamidomethyl (C))NDLIAK_	ENSG00000110048|ENST00000263847|OSBP;ENSG00000184792|ENST00000332585|OSBP2;ENST00000496367.1_1_22:31266465-31268361:+|nuORF;nc|ENSG00000184792|Q969R2-2|OSBP2;nc|ENSG00000184792|Q969R2-3|OSBP2;nc|ENSG00000184792|Q969R2-6|OSBP2;OSBP|p.I255Nfs*16|1|0.03|ENSG00000110048|chr11:59608542-59608543|-/AACATAAT|frameshift_variant	46.45678178249821	0.2311111838007999	5				NaN	NaN	0	NaN	3846	3399	7245
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7248	23.64	NaN	1878.7	30	0	352.49	0.106	+			2895	ASATALVSR	9	54	438.2519838943856	NaN	0	438.2509765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASATALVSR_	ENSG00000167491|ENST00000683918|GATAD2A;nc|ENSG00000167491|Q86YP4-2|GATAD2A;nc|ENSG00000167491|Q86YP4|GATAD2A	131.61620852596164	0.00033844070914861534	5				NaN	NaN	0	NaN	3847	3399	7245
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7249	23.641	NaN	1172.6	30	0	135.53	0.106	+			39399	STDPAAPNLK	10	48	507.26650252952027	1012.5184521258406	2	507.2670593261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STDPAAPNLK_	ENSG00000137076|ENST00000314888|TLN1;nc|ENSG00000137076|Q9Y490-2|TLN1;TLN1|p.P1628Rfs*20|1|0.44|ENSG00000137076|chr9:35707144-35707144|G/-|frameshift_variant	72.87924865735499	0.25379688738724415	5				NaN	NaN	0	NaN	3848	3399	7245
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7250	23.643	NaN	724.64	30	0	75.377	0.035	+			26636	LVCHQRIH	8	47	503.2724914550781	NaN	0	503.2724914550781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LVCHQRIH_	ZFP14|p.R385C|1|0.26|ENSG00000142065|chr19:36340673-36340673|G/A|missense_variant;ZNF3|p.R413C|1|0.27|ENSG00000166526|chr7:100071247-100071247|G/A|missense_variant	33.51558372728122	1.7418937515398478	5				NaN	NaN	0	NaN	3849	3399	7245
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7263	23.671	NaN	22226	30	0	6987.4	0.214			+	24746	LHSKESFAK	9	73	523.7847513096001	1045.554949686	2	523.7854614257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LHSKESFAK_	REV__ENSG00000221994|ENST00000276054|ZNF630;REV__nc|ENSG00000221994|Q2M218-2|ZNF630	104.74654710444128	0.034358562718640136	5				NaN	NaN	0	NaN	3859	3402	7262
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7264	23.675	NaN	1194.9	30	0	164.89	0.034	+			9973	ERGIPSLPC	9	47	486.2523118613734	NaN	0	486.2519836425781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ERGIPSLPC_	ENSG00000107954|ENST00000369780|NEURL1;nc|ENSG00000107954|O76050-2|NEURL1	29.14955571784316	0.3303970763161698	5				NaN	NaN	0	NaN	3860	3402	7262
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7282	23.712	NaN	5976.9	30	0	701.69	0.214	+			15925	HADGTIVRY	9	65	516.2667126937519	1030.5188724543036	2	516.2672729492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HADGTIVRY_	ENSG00000138002|ENST00000260570|IFT172;ENST00000476264.6_1_2:27703990-27712589:-|nuORF;ENST00000507184.5_1_2:27680991-27709067:-|nuORF;ENST00000511842.5_1_2:27693746-27712529:-|nuORF;IFT172|p.G252Afs*6|1|0.19|ENSG00000138002|chr2:27481076-27481076|C/-|frameshift_variant;IFT172|p.W628Qfs*6|1|0.03|ENSG00000138002|chr2:27465466-27465467|-/CATTG|frameshift_variant;nc|ENSG00000138002|Q9UG01-2|IFT172;nc|ENSG00000138002|Q9UG01-3|IFT172	77.31757898189308	0.1091473830098891	5				NaN	NaN	0	NaN	3875	3405	7281
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7283	23.715	NaN	2600.7	30	0	359.93	0.036			+	33212	RFGTGAASLLQ	11	60	560.8086001664193	1119.6026473996385	2	560.8092041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RFGTGAASLLQ_	REV__KANSL1|p.K437Nfs*43|1|0.37|ENSG00000120071|chr17:46094680-46094680|T/-|frameshift_variant	72.2432373244024	0.21703855426835802	5				NaN	NaN	0	NaN	3876	3405	7281
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7297	23.745	NaN	2344.9	30	0	747.83	0.214				-1	 	0	43	479.2713712666092	956.5281896000184	2	479.2713317871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3887	3408	7296
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7298	23.748	NaN	1992.2	30	0	376.13	0.106			+	28506	NHLYLVKL	8	55	500.30069512083764	NaN	0	500.3004455566406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NHLYLVKL_	REV__ENSG00000136695|ENST00000393200|IL36RN	50.0245360154114	1.7418937515398478	5				NaN	NaN	0	NaN	3888	3408	7296
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7299	23.75	NaN	4397.9	30	0	1467.8	0.036	+			15401	GTYGLDSVKK	10	36	356.52906879950643	1066.5653769987193	3	356.5291748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTYGLDSVKK_	ENSG00000087338|ENST00000282570|GMCL1	39.252832667884924	0.5560298534376815	5				NaN	NaN	0	NaN	3889	3408	7296
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7317	23.788	NaN	9288.8	30	0	1633.2	0.214			+	45761	VAEPFEPN	8	70	451.7158723654605	901.417191797721	2	451.7160949707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VAEPFEPN_	REV__ENSG00000137501|ENST00000359152|SYTL2;REV__nc|ENSG00000137501|Q9HCH5-11|SYTL2;REV__nc|ENSG00000137501|Q9HCH5-12|SYTL2;REV__nc|ENSG00000137501|Q9HCH5-7|SYTL2;REV__nc|ENSG00000137501|Q9HCH5-8|SYTL2;REV__SYTL2|p.Q663Tfs*35|1|0.14|ENSG00000137501|chr11:85709344-85709345|-/T|frameshift_variant	51.33545320467046	0.5859736979383976	5				NaN	NaN	0	NaN	3904	3411	7316
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7318	23.791	NaN	6474.1	30	0	1121.5	0.106	+			33448	RILSGVVTK	9	76	486.8133048462203	971.6120567592407	2	486.8132629394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RILSGVVTK_	ENSG00000142534|ENST00000270625|RPS11	91.26522074875469	0.06129826844580791	5				NaN	NaN	0	NaN	3905	3411	7316
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7319	23.793	NaN	4644.8	30	0	1603.2	0.106	+			8318	EAKGTVAL	8	57	394.7290403431994	787.4435277531989	2	394.7289733886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EAKGTVAL_	ENSG00000205502|ENST00000380392|C2CD4B	79.71258880314673	0.32596852995588826	5				NaN	NaN	0	NaN	3906	3411	7316
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7320	23.795	NaN	2350.5	30	0	349.35	0.106	+			24129	LEKTGVAV	8	51	408.74482942222903	815.4751059112581	2	408.7449951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LEKTGVAV_	ENSG00000196924|ENST00000369850|FLNA;FLNA|p.A1026Lfs*20|1|0.42|ENSG00000196924|chrX:154361439-154361439|C/-|frameshift_variant;FLNA|p.G2237Efs*109|1|0.28|ENSG00000196924|chrX:154352240-154352240|C/-|frameshift_variant;FLNA|p.Q1716Sfs*23|2|0.38|ENSG00000196924|chrX:154354896-154354896|G/-|frameshift_variant;FLNA|p.R2520Vfs*16|1|0.7|ENSG00000196924|chrX:154349560-154349560|G/-|frameshift_variant;nc|ENSG00000196924|P21333-2|FLNA	76.7741389293348	0.3504530765139327	5				NaN	NaN	0	NaN	3907	3411	7316
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7321	23.797	NaN	2093.1	30	0	261.34	0.106	+			14338	GTAAGEKLK	9	55	437.75372314453125	NaN	0	437.75372314453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTAAGEKLK_	ENSG00000131721|ENST00000371388|RHOXF2;ENSG00000203989|ENST00000371402|RHOXF2B	87.69643885390035	0.04624013146650493	5				NaN	NaN	0	NaN	3908	3411	7316
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7322	23.799	NaN	1485.3	30	0	577.49	0.032	+			36770	SIAAAVAPK	9	42	414.25278556152017	826.4910181898404	2	414.2527160644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SIAAAVAPK_	ENSG00000065328|ENST00000378714|MCM10;MCM10|p.K480R|1|0.2|ENSG00000065328|chr10:13191319-13191319|A/G|missense_variant;MCM10|p.N701Tfs*35|2|0.27|ENSG00000065328|chr10:13197741-13197741|A/-|frameshift_variant;MCM10|p.R719Gfs*17|1|0.35|ENSG00000065328|chr10:13198715-13198715|A/-|frameshift_variant;nc|ENSG00000065328|Q7L590|MCM10	56.72105179125745	0.24094814563026265	5				NaN	NaN	0	NaN	3909	3411	7316
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7323	23.799	NaN	1585.7	30	0	465.41	0.142			+	28230	NCCKGSPLIF	10	54	569.7714233398438	NaN	0	569.7714233398438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_NCC(Carbamidomethyl (C))KGSPLIF_	REV__ENSG00000047936|ENST00000368507|ROS1;REV__nc|ENSG00000047936|P08922|ROS1;REV__ROS1|p.L1167*|1|0.19|ENSG00000047936|chr6:117359957-117359957|A/-|frameshift_variant;REV__ROS1|p.L1167Ffs*26|1|0.27|ENSG00000047936|chr6:117359956-117359957|-/A|frameshift_variant;REV__ROS1|p.N1247Mfs*14|1|0.11|ENSG00000047936|chr6:117357918-117357918|T/-|frameshift_variant;REV__ROS1|p.N1821Tfs*2|1|0.44|ENSG00000047936|chr6:117326319-117326319|T/-|frameshift_variant	42.396135135203025	0.3536752194735987	5				NaN	NaN	0	NaN	3910	3411	7316
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7341	23.838	NaN	23606	30	0	13322	0.214	+			47796	VSIFINNT	8	71	454.24711759715905	906.4796822611181	2	454.24530029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSIFINNT_	ENSG00000144847|ENST00000393775|IGSF11;ENST00000459718.1_1_3:118644864-118649075:-|nuORF;IGSF11|p.S339Lfs*36|1|0.06|ENSG00000144847|chr3:118902801-118902802|-/AG|frameshift_variant;nc|ENSG00000144847|Q5DX21-2|IGSF11;nc|ENSG00000144847|Q5DX21-3|IGSF11	42.396135135203025	0.6414440140393314	5				NaN	NaN	0	NaN	3925	3414	7340
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7342	23.842	NaN	7250.1	30	0	1016.2	0.106	+			4427	ATIEETYSK	9	66	521.258688538428	1040.502824143656	2	521.25927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATIEETYSK_	ENSG00000130475|ENST00000596536|FCHO1;ENST00000601247.5_1_19:17858586-17877404:+|nuORF;FCHO1|p.A50V|1|0.36|ENSG00000130475|chr19:17764404-17764404|C/T|missense_variant;nc|ENSG00000130475|O14526-2|FCHO1	134.7655990226056	0.012935733000282069	5				NaN	NaN	0	NaN	3926	3414	7340
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7343	23.844	NaN	4321.6	30	0	1259.8	0.106	+			43963	TPEEKIREY	9	43	388.8679741315487	1163.582092994846	3	388.86798095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TPEEKIREY_	ENSG00000138668|ENST00000313899|HNRNPD;ENST00000514325.1_1_4:83279715-83279970:-|nuORF;nc|ENSG00000138668|Q14103-2|HNRNPD;nc|ENSG00000138668|Q14103-3|HNRNPD;nc|ENSG00000138668|Q14103-4|HNRNPD	25.57405402267927	0.5642445186134241	5				NaN	NaN	0	NaN	3927	3414	7340
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7344	23.846	NaN	918.46	30	0	95.015	0.106	+			5275	ATVETTIAR	9	46	481.2691345214844	NaN	0	481.2691345214844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATVETTIAR_	ENSG00000064042|ENST00000503057|LIMCH1;LIMCH1|p.K805Rfs*20|1|0.37|ENSG00000064042|chr4:41680049-41680049|A/-|frameshift_variant;LIMCH1|p.T960Pfs*48|1|0.18|ENSG00000064042|chr4:41685768-41685768|A/-|frameshift_variant;nc|ENSG00000064042|Q9UPQ0-10|LIMCH1;nc|ENSG00000064042|Q9UPQ0-2|LIMCH1;nc|ENSG00000064042|Q9UPQ0-3|LIMCH1;nc|ENSG00000064042|Q9UPQ0-4|LIMCH1;nc|ENSG00000064042|Q9UPQ0-5|LIMCH1;nc|ENSG00000064042|Q9UPQ0-6|LIMCH1;nc|ENSG00000064042|Q9UPQ0-8|LIMCH1;nc|ENSG00000064042|Q9UPQ0-9|LIMCH1;nc|ENSG00000064042|Q9UPQ0|LIMCH1	36.446750945000026	0.29355505452396785	5				NaN	NaN	0	NaN	3928	3414	7340
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7345	23.848	NaN	1235.1	30	0	115.41	0.106			+	25715	LRPSVALNK	9	59	499.31126553473297	NaN	0	499.310791015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LRPSVALNK_	REV__ENST00000529953.5_1_11:66282092-66287879:+|nuORF	40.05817265558897	0.275207446262312	5				NaN	NaN	0	NaN	3929	3414	7340
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7346	23.849	NaN	1029	30	0	287.99	0.037	+			51044	YLDELNEEI	9	29	379.8487854003906	NaN	0	379.8487854003906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YLDELNEEI_	tr|U7SYR4|U7SYR4_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00904PE=4SV=1	39.252832667884924	0.27938773122138094	5				NaN	NaN	0	NaN	3930	3414	7340
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7364	23.887	NaN	1344.5	30	0	265.97	0.142			+	46100	VDDIKPRQ	8	49	485.7690397911907	969.5235266491815	2	485.7691650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VDDIKPRQ_	REV__ENSG00000130396|ENST00000683244|AFDN;REV__nc|ENSG00000130396|P55196-1|AFDN;REV__nc|ENSG00000130396|P55196-2|AFDN;REV__nc|ENSG00000130396|P55196-3|AFDN;REV__nc|ENSG00000130396|P55196-5|AFDN;REV__nc|ENSG00000130396|P55196-6|AFDN;REV__nc|ENSG00000130396|P55196|AFDN	40.77816245573522	0.6514838689002179	5				NaN	NaN	0	NaN	3945	3417	7363
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7395	23.956	NaN	4106.1	30	0	1297.2	0.214	+			45219	TVNTSLVGK	9	57	459.7668426636641	917.5191323941282	2	459.766357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVNTSLVGK_	CCDC66|p.A265Sfs*9|1|0.15|ENSG00000180376|chr3:56567024-56567025|-/A|frameshift_variant;CCDC66|p.T207Nfs*2|2|0.31|ENSG00000180376|chr3:56566661-56566662|-/A|frameshift_variant;CCDC66|p.V732*|1|0.25|ENSG00000180376|chr3:56617454-56617454|A/-|frameshift_variant;ENSG00000180376|ENST00000394672|CCDC66;ENST00000422788.5_1_3:56595403-56599181:+|nuORF;ENST00000469966.1_1_3:56592935-56598176:+|nuORF;ENST00000472582.5_1_3:56591255-56599181:+|nuORF;nc|ENSG00000180376|A2RUB6-2|CCDC66;nc|ENSG00000180376|A2RUB6-3|CCDC66;nc|ENSG00000180376|A2RUB6-4|CCDC66	83.6470233535746	0.08277643980271215	5				NaN	NaN	0	NaN	3970	3423	7394
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7396	23.959	NaN	1439.8	30	0	471.35	0.106	+			31109	QFSGKITVK	9	45	504.2981914234452	1006.5818299136904	2	504.298095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QFSGKITVK_	ENSG00000075568|ENST00000186436|TMEM131;TMEM131|p.G555Wfs*10|1|0.32|ENSG00000075568|chr2:97812704-97812705|-/A|frameshift_variant;TMEM131|p.L1469Tfs*5|1|0.43|ENSG00000075568|chr2:97772340-97772341|-/T|frameshift_variant;TMEM131|p.L538Ffs*27|1|0.09|ENSG00000075568|chr2:97813974-97813975|-/A|frameshift_variant;TMEM131|p.N815Ifs*2|1|0.27|ENSG00000075568|chr2:97802749-97802749|T/-|frameshift_variant;TMEM131|p.N815Kfs*9|1|0.31|ENSG00000075568|chr2:97802748-97802749|-/T|frameshift_variant	66.42927471994793	0.16001998865088202	5				NaN	NaN	0	NaN	3971	3423	7394
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7397	23.961	NaN	1444.4	30	0	284.64	0.033			+	48138	VSVSGKACK	9	39	439.74051762558946	NaN	0	439.7408447265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSVSGKACK_	REV__ENST00000367157.4_2_1:205272355-205272433:-|nuORF	34.172542307311794	0.30503706118289736	5				NaN	NaN	0	NaN	3972	3423	7394
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7412	23.992	NaN	14763	30	0	2846.4	0.214	+			36858	SIFKQPVTK	9	67	524.313076980941	1046.611601028682	2	524.3146362304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIFKQPVTK_	ENSG00000071655|ENST00000434436|MBD3;ENSG00000134046|ENST00000256429|MBD2;ENST00000590830.5_1_19:1578341-1584901:-|nuORF;nc|ENSG00000071655|O95983-2|MBD3	173.39201167336012	0.002187917786942103	5				NaN	NaN	0	NaN	3984	3426	7411
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7413	23.996	NaN	1974.9	30	0	247.41	0.036	+			43167	TETHVERVL	9	51	542.2928672453289	1082.5711815574577	2	542.7957153320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TETHVERVL_	ENSG00000076201|ENST00000265562|PTPN23;PTPN23|p.L1513Wfs*71|1|0.44|ENSG00000076201|chr3:47412805-47412805|G/-|frameshift_variant	47.95952297671804	0.32689736945648856	5				NaN	NaN	0	NaN	3985	3426	7411
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7431	24.033	NaN	7323.4	30	0	927.9	0.214			+	11288	FKGAISPK	8	58	424.2552188653292	846.4958847974584	2	424.2550964355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FKGAISPK_	REV__ENSG00000166948|ENST00000202625|TGM6;REV__nc|ENSG00000166948|O95932-2|TGM6	90.77665401227738	0.27511901818546464	5				NaN	NaN	0	NaN	4000	3429	7430
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7432	24.036	NaN	839.65	30	0	83.223	0.035	+			46419	VEQQLQQL	8	34	493.26834540066534	984.5221378681307	2	493.2685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VEQQLQQL_	ENSG00000235173|ENST00000347708|HGH1;ENST00000534255.1_1_8:145193835-145194452:+|nuORF	32.81241826257853	0.7059802730411993	5				NaN	NaN	0	NaN	4001	3429	7430
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7450	24.074	NaN	6712.4	30	0	3940.5	0.214	+			14639	GTGTIIVAK	9	52	430.2657232411113	858.5168935490226	2	430.26556396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTGTIIVAK_	ENSG00000083857|ENST00000441802|FAT1;FAT1|p.G2934Vfs*3|2|0.37|ENSG00000083857|chr4:186617787-186617787|T/-|frameshift_variant;FAT1|p.N3847Yfs*7|1|0.03|ENSG00000083857|chr4:186601370-186601371|-/TTATA|frameshift_variant;FAT1|p.P3228Lfs*42|1|0.27|ENSG00000083857|chr4:186611556-186611556|G/-|frameshift_variant;FAT1|p.P4313Lfs*36|1|0.34|ENSG00000083857|chr4:186596602-186596602|G/-|frameshift_variant;FAT1|p.Q2933Hfs*14|1|0.33|ENSG00000083857|chr4:186617787-186617788|-/G|frameshift_variant;FAT1|p.V1878Cfs*8|2|0.22|ENSG00000083857|chr4:186620955-186620956|-/G|frameshift_variant	90.36981228632155	0.0638227155548745	5				NaN	NaN	0	NaN	4016	3432	7449
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7451	24.077	NaN	10904	30	0	1664.4	0.106	+			25914	LSGPNLPN	8	49	406.2180843423433	810.4216157514866	2	406.2187805175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSGPNLPN_	ENST00000314888.9_1_9:35697593-35697719:-|nuORF	38.80614096846853	0.6637206697844082	5				NaN	NaN	0	NaN	4017	3432	7449
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7452	24.079	NaN	2253.1	30	0	482.85	0.106			+	27121	MAPQKKGQ	8	50	444.2413592125695	886.468165491939	2	444.2414245605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MAPQKKGQ_	REV__ENSG00000121904|ENST00000373381|CSMD2;REV__nc|ENSG00000121904|Q7Z408|CSMD2	44.53106598305862	0.628196326904373	5				NaN	NaN	0	NaN	4018	3432	7449
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7453	24.081	NaN	682.88	30	0	86.045	0.106			+	47832	VSKVPFGGLT	10	39	502.7902452449207	1003.5659375566414	2	502.3021545410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSKVPFGGLT_	REV__ENSG00000153827|ENST00000675903|TRIP12;REV__ENST00000479037.5_1_2:230672327-230744801:-|nuORF;REV__nc|ENSG00000153827|Q14669-2|TRIP12;REV__nc|ENSG00000153827|Q14669-3|TRIP12;REV__nc|ENSG00000153827|Q14669-4|TRIP12;REV__nc|ENSG00000153827|Q14669|TRIP12;REV__TRIP12|p.H1434Afs*2|1|0.16|ENSG00000153827|chr2:229791143-229791144|-/T|frameshift_variant;REV__TRIP12|p.N880Kfs*36|1|0.21|ENSG00000153827|chr2:229804013-229804014|-/T|frameshift_variant;REV__TRIP12|p.S1195Lfs*24|6|0.27|ENSG00000153827|chr2:229796599-229796599|A/-|frameshift_variant;REV__TRIP12|p.Y1552Lfs*6|1|0.12|ENSG00000153827|chr2:229787620-229787621|-/A|frameshift_variant	32.81241826257853	0.6118718159329168	5				NaN	NaN	0	NaN	4019	3432	7449
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7454	24.083	NaN	1157.7	30	0	110.15	0.036	+			8296	EAIQRTEAY	9	51	540.7692538810215	1079.523954828843	2	540.7695922851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EAIQRTEAY_	ENSG00000148396|ENST00000684901|SEC16A;nc|ENSG00000148396|O15027-2|SEC16A;nc|ENSG00000148396|O15027-3|SEC16A;nc|ENSG00000148396|O15027-4|SEC16A;nc|ENSG00000148396|O15027-5|SEC16A;SEC16A|p.P2155Hfs*25|1|0.25|ENSG00000148396|chr9:136447664-136447664|G/-|frameshift_variant	87.75429964447693	0.0711966946989736	5				NaN	NaN	0	NaN	4020	3432	7449
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7472	24.121	NaN	9632.5	30	0	3428.7	0.214	+			46917	VIVDSTVGK	9	58	459.2682877427553	NaN	0	459.2685241699219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VIVDSTVGK_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	60.11826168202944	0.14881452885248947	5				NaN	NaN	0	NaN	4035	3435	7471
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7473	24.124	NaN	55596	30	0	12536	0.106			+	-1	LSKGACPNPSW	11	68	406.1972464929398	1215.5699100790196	3	406.19744873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LSKGAC(Carbamidomethyl (C))PNPSW_	REV__ENST00000488380.5_1_3:52514663-52514885:+|nuORF	23.37791116691581	0.7445759747191538	5				NaN	NaN	0	NaN	4036	3435	7471
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7474	24.126	NaN	5383	30	0	558.31	0.106			+	26454	LTHHEMVFQG	10	48	400.1938848181415	1197.5598250546245	3	400.19403076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LTHHEMVFQG_	REV__ENSG00000138759|ENST00000512123|FRAS1;REV__nc|ENSG00000138759|Q86XX4|FRAS1	25.125986553469783	0.6746423231557295	5				NaN	NaN	0	NaN	4037	3435	7471
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7475	24.128	NaN	1667.8	30	0	266.35	0.037			+	37583	SLNQIITVQL	10	62	564.834301578417	1127.654050223634	2	564.8353881835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLNQIITVQL_	REV__ENST00000498732.5_1_X:139854285-139854417:+|nuORF	68.62578634547417	0.2885473079336931	5				NaN	NaN	0	NaN	4038	3435	7471
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7493	24.166	NaN	4996.1	30	0	583.97	0.214	+			38205	SQFSGKITVK	10	68	547.8133756918835	1093.612198450567	2	547.8142700195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SQFSGKITVK_	ENSG00000075568|ENST00000186436|TMEM131;TMEM131|p.G555Wfs*10|1|0.32|ENSG00000075568|chr2:97812704-97812705|-/A|frameshift_variant;TMEM131|p.L1469Tfs*5|1|0.43|ENSG00000075568|chr2:97772340-97772341|-/T|frameshift_variant;TMEM131|p.L538Ffs*27|1|0.09|ENSG00000075568|chr2:97813974-97813975|-/A|frameshift_variant;TMEM131|p.N815Ifs*2|1|0.27|ENSG00000075568|chr2:97802749-97802749|T/-|frameshift_variant;TMEM131|p.N815Kfs*9|1|0.31|ENSG00000075568|chr2:97802748-97802749|-/T|frameshift_variant	104.06999374311218	0.06561005972557103	5				NaN	NaN	0	NaN	4053	3438	7492
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7494	24.169	NaN	5405.2	30	0	1374.2	0.106				-1	LCALMGNVL	9	69	475.2452582175638	948.4759635019276	2	475.2453308105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LCALM(Oxidation (M))GNVL_	ENSG00000196772|ENST00000641093|OR14A16	50.0245360154114	0.3026755932229825	5				NaN	NaN	0	NaN	4054	3438	7492
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7495	24.171	NaN	8779.5	30	0	1450.6	0.106	+			14727	GTISAITSK	9	62	439.2531435114524	876.4917340897048	2	439.2530517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTISAITSK_	ENSG00000145113|ENST00000463781|MUC4;MUC4|p.L3985Ffs*274|1|0.3|ENSG00000145113|chr3:195779627-195779627|G/-|frameshift_variant;MUC4|p.N4902Tfs*8|1|0.37|ENSG00000145113|chr3:195761027-195761027|T/-|frameshift_variant;nc|ENSG00000145113|Q99102-10|MUC4;nc|ENSG00000145113|Q99102-11|MUC4;nc|ENSG00000145113|Q99102-15|MUC4;nc|ENSG00000145113|Q99102-16|MUC4;nc|ENSG00000145113|Q99102-17|MUC4;nc|ENSG00000145113|Q99102-2|MUC4;nc|ENSG00000145113|Q99102-3|MUC4;nc|ENSG00000145113|Q99102-5|MUC4;nc|ENSG00000145113|Q99102-7|MUC4;nc|ENSG00000145113|Q99102-8|MUC4;nc|ENSG00000145113|Q99102-9|MUC4	150.36159442982594	0.006784847064083231	5				NaN	NaN	0	NaN	4055	3438	7492
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7496	24.173	NaN	5153.4	30	0	1749.9	0.106				-1	MVDNWRPAQ	9	39	378.17810839975897	1131.512495799477	3	378.1781921386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_M(Oxidation (M))VDNWRPAQ_	ENSG00000104267|ENST00000285379|CA2	31.529811441608018	0.5085848003137583	5				NaN	NaN	0	NaN	4056	3438	7492
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7497	24.175	NaN	1584.9	30	0	149.21	0.106	+			11012	FEKDVKGESL	10	57	576.3010532992895	NaN	0	576.3010864257812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FEKDVKGESL_	ENSG00000119888|ENST00000263735|EPCAM	88.1336951990783	0.06092585671649051	5				NaN	NaN	0	NaN	4057	3438	7492
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7498	24.177	NaN	613.72	30	0	92.782	0.035	+			23820	LCRWSKIV	8	36	502.7903747558594	NaN	0	502.7903747558594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LCRWSKIV_	ENST00000404739.7_1_10:104848962-104849268:-|nuORF	31.954861631926434	1.7418937515398478	5				NaN	NaN	0	NaN	4058	3438	7492
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7499	24.177	NaN	622.73	30	0	139.42	0.139			+	45228	TVPLLTYR	8	33	481.7884826660156	NaN	0	481.7884826660156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TVPLLTYR_	REV__ENST00000324545.8_2_X:40945168-40945276:+|nuORF	18.324413293986947	1.7418937515398478	5				NaN	NaN	0	NaN	4059	3438	7492
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7517	24.217	NaN	4598	30	0	1113.4	0.214	+			2841	ASAIPAYSK	9	57	454.24711759715905	906.4796822611181	2	454.2481689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASAIPAYSK_	ENSG00000090054|ENST00000262554|SPTLC1;SPTLC1|p.E218Afs*44|1|0.36|ENSG00000090054|chr9:92059215-92059216|CT/-|frameshift_variant	80.45461616416974	0.09558281504443908	5				NaN	NaN	0	NaN	4074	3441	7516
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7518	24.22	NaN	1586.8	30	0	255.82	0.106	+			21903	KRSIPLESC	9	53	516.7771706726815	1031.5397884121628	2	516.7781372070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KRSIPLESC_	ENSG00000169047|ENST00000305123|IRS1;IRS1|p.H598Tfs*38|3|0.31|ENSG00000169047|chr2:226796948-226796948|C/-|frameshift_variant;IRS1|p.P368Rfs*95|1|0.18|ENSG00000169047|chr2:226797636-226797636|G/-|frameshift_variant	56.72105179125745	0.24094814563026265	5				NaN	NaN	0	NaN	4075	3441	7516
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7519	24.222	NaN	1722.8	30	0	219.8	0.106	+			19856	KEEIVHQL	8	51	498.2799140629686	994.5452751927372	2	498.2795104980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEEIVHQL_	ENSG00000085231|ENST00000380822|AK6;nc|ENSG00000085231|Q9Y3D8-2|AK6	108.08749611321984	0.24621691167378246	5				NaN	NaN	0	NaN	4076	3441	7516
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7520	24.224	NaN	709.32	30	0	77.515	0.033	+			16884	HPHGPPGGL	9	38	434.7237548828125	NaN	0	434.7237548828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HPHGPPGGL_	ENSG00000072182|ENST00000358078|ASIC4;nc|ENSG00000072182|Q96FT7-1|ASIC4	49.21078951299608	0.21213183292994464	5				NaN	NaN	0	NaN	4077	3441	7516
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7538	24.261	NaN	2105.9	30	0	118.6	0.214	+			33062	REKIETEL	8	66	509.2825159082863	1016.5504788833726	2	509.282470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_REKIETEL_	ENSG00000164924|ENST00000395958|YWHAZ;ENST00000440317.1_1_2:127315208-127315727:-|nuORF;ENST00000480304.5_1_8:101936173-101961117:-|nuORF;ENST00000517727.5_1_8:101936341-101962760:-|nuORF;YWHAZ|p.K115Sfs*16|1|0.39|ENSG00000164924|chr8:100924989-100924990|TT/-|frameshift_variant	51.19269402634007	0.5868595481438337	5				NaN	NaN	0	NaN	4092	3444	7537
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7539	24.264	NaN	1374.8	30	0	459.48	0.033	+			49107	VVLGSGGVGK	10	36	436.76396705762517	NaN	0	436.76385498046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVLGSGGVGK_	ENSG00000116473|ENST00000369709|RAP1A;ENSG00000123728|ENST00000370874|RAP2C;ENSG00000125249|ENST00000245304|RAP2A;ENSG00000127314|ENST00000250559|RAP1B;ENSG00000181467|ENST00000323534|RAP2B;ENST00000460800.5_1_12:69042504-69044290:+|nuORF;ENST00000494982.1_1_1:112233982-112249293:+|nuORF;ENST00000501412.2_1_12:69042504-69042582:+|nuORF;ENST00000535492.5_2_12:69042504-69047907:+|nuORF;nc|ENSG00000127314|P61224-2|RAP1B;nc|ENSG00000127314|P61224-3|RAP1B;nc|ENSG00000127314|P61224-4|RAP1B;RAP2B|p.F39Lfs*6|1|0.34|ENSG00000181467|chr3:153162808-153162809|TT/-|frameshift_variant	49.44154591367651	0.30913310806145605	5				NaN	NaN	0	NaN	4093	3444	7537
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7574	24.339	NaN	5963.9	30	0	773.87	0.214	+			42630	TAVEAGRAL	9	54	444.2505160671259	886.4864792010518	2	444.2509460449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAVEAGRAL_	ENSG00000032444|ENST00000600737|PNPLA6;nc|ENSG00000032444|Q8IY17-2|PNPLA6;nc|ENSG00000032444|Q8IY17-3|PNPLA6;nc|ENSG00000032444|Q8IY17-5|PNPLA6;nc|ENSG00000032444|Q8IY17|PNPLA6;PNPLA6|p.S1175Pfs*10|1|0.55|ENSG00000032444|chr19:7558944-7558944|G/-|frameshift_variant	78.26377905018397	0.10505600812668463	5				NaN	NaN	0	NaN	4122	3450	7573
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7575	24.343	NaN	4705.9	30	0	770.29	0.106			+	-1	LMTRVAEMQ	9	35	365.5175740539367	NaN	0	365.51763916015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LM(Oxidation (M))TRVAEMQ_	REV__ENSG00000130226|ENST00000377770|DPP6;REV__ENST00000484789.5_1_7:154659706-154672733:+|nuORF;REV__nc|ENSG00000130226|P42658-2|DPP6	34.172542307311794	0.30503706118289736	5				NaN	NaN	0	NaN	4123	3450	7573
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7576	24.345	NaN	708.45	30	0	70.689	0.036			+	-1	AGINVIKPDC	10	39	543.7835228234318	NaN	0	543.7830810546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_AGINVIKPDC(Carbamidomethyl (C))_	REV__ENSG00000176884|ENST00000371561|GRIN1;REV__GRIN1|p.W768Lfs*32|1|0.27|ENSG00000176884|chr9:137163294-137163295|-/C|frameshift_variant;REV__nc|ENSG00000176884|Q05586-2|GRIN1;REV__nc|ENSG00000176884|Q05586-3|GRIN1;REV__nc|ENSG00000176884|Q05586-4|GRIN1;REV__nc|ENSG00000176884|Q05586-5|GRIN1;REV__nc|ENSG00000176884|Q05586-6|GRIN1;REV__nc|ENSG00000176884|Q05586-7|GRIN1	32.81241826257853	0.3924360933802784	5				NaN	NaN	0	NaN	4124	3450	7573
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7594	24.382	NaN	24861	30	0	16135	0.214				-1	 	0	42	322.1934555438265	642.372358154453	2	322.1937561035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4139	3453	7593
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7595	24.386	NaN	3885.7	30	0	292.21	0.106			+	16553	HEVSFAKQ	8	60	473.24320474211487	944.4718565510298	2	473.2431945800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HEVSFAKQ_	REV__AGGF1|p.N681Tfs*29|4|0.3|ENSG00000164252|chr5:77063142-77063142|A/-|frameshift_variant;REV__ENSG00000164252|ENST00000312916|AGGF1	47.91560031466742	0.6071945918984287	5				NaN	NaN	0	NaN	4140	3453	7593
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7596	24.388	NaN	2824.3	30	0	756.08	0.106	+			39952	STMGYMMAK	9	54	518.2190601801826	1034.4235674271652	2	518.2203369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_STM(Oxidation (M))GYMMAK_	ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;ENST00000518337.1_1_8:74128289-74128592:-|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P	58.78195531508484	0.22376836668196862	5				NaN	NaN	0	NaN	4141	3453	7593
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7597	24.39	NaN	7782.9	30	0	2864.1	0.039	+			4569	ATLEETLVKKK	11	45	420.5901151879457	1258.748516164037	3	420.5904846191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATLEETLVKKK_	ENSG00000254093|ENST00000314787|PINX1	21.780426970141523	0.7613322811393133	5				NaN	NaN	0	NaN	4142	3453	7593
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7613	24.423	NaN	2665.2	30	0	721.34	0.214	+			40879	SVFHASLAK	9	55	480.2689737611528	958.5233945891056	2	480.26885986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVFHASLAK_	ENSG00000064651|ENST00000262461|SLC12A2;nc|ENSG00000064651|P55011-3|SLC12A2;SLC12A2|p.E1119Rfs*7|1|0.47|ENSG00000064651|chr5:128184417-128184418|-/A|frameshift_variant;SLC12A2|p.P1171Sfs*18|1|0.38|ENSG00000064651|chr5:128186498-128186499|-/TC|frameshift_variant	118.74307786436346	0.02196067127630568	5				NaN	NaN	0	NaN	4155	3456	7612
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7614	24.427	NaN	1080.4	30	0	402.07	0.106	+			40132	STQDTLLIKK	10	32	382.8955078125	NaN	0	382.8955078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STQDTLLIKK_	ENSG00000101825|ENST00000217939|MXRA5;MXRA5|p.Q2683Kfs*44|1|0.34|ENSG00000101825|chrX:3310156-3310156|G/-|frameshift_variant	24.231819034082204	0.4201028297492154	5				NaN	NaN	0	NaN	4156	3456	7612
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7615	24.429	NaN	991.04	30	0	311	0.035			+	34234	RTGGLTCVAA	10	49	503.26005979266677	NaN	0	503.2598876953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_RTGGLTC(Carbamidomethyl (C))VAA_	REV__ENSG00000107187|ENST00000371748|LHX3	40.77816245573522	0.36390427802201647	5				NaN	NaN	0	NaN	4157	3456	7612
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7632	24.464	NaN	18830	30	0	4889	0.214	+			40039	STMVDVRVMKK	11	56	431.90504106155174	1292.6932937848553	3	431.90545654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STMVDVRVMKK_	ENSG00000085224|ENST00000373344|ATRX;nc|ENSG00000085224|P46100-2|ATRX;nc|ENSG00000085224|P46100-3|ATRX;nc|ENSG00000085224|P46100-4|ATRX;nc|ENSG00000085224|P46100-5|ATRX	63.42647028704847	0.292869158926425	5				NaN	NaN	0	NaN	4171	3459	7631
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7633	24.468	NaN	1209.4	30	0	381.41	0.106	+			26421	LTFVSSGCQ	9	42	471.2248993781679	NaN	0	471.2251892089844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LTFVSSGCQ_	ENSG00000182591|ENST00000332378|KRTAP11-1	44.116797842482775	0.2472372736944149	5				NaN	NaN	0	NaN	4172	3459	7631
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7634	24.469	NaN	1571.2	30	0	328.9	0.034				-1	ATAGMLCLI	9	46	483.2447183011625	964.474883669125	2	483.24407958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_ATAGM(Oxidation (M))LC(Carbamidomethyl (C))LI_	ENSG00000188818|ENST00000283441|ZDHHC11;ENSG00000206077|ENST00000508859|ZDHHC11B	25.450171626174864	0.5654022654467333	5				NaN	NaN	0	NaN	4173	3459	7631
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7650	24.503	NaN	4704.6	30	0	476.13	0.215	+			43926	TPAGVVNKY	9	67	474.7608497696831	947.5071466061662	2	474.76043701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TPAGVVNKY_	ENSG00000172893|ENST00000355527|DHCR7	139.97047562133406	0.010493916756945389	5				NaN	NaN	0	NaN	4186	3462	7649
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7651	24.506	NaN	1311.6	30	0	200.42	0.106	+			9090	EGIPVEMVV	9	46	486.7580143498311	971.5014757664622	2	486.75823974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EGIPVEMVV_	ENSG00000149476|ENST00000394900|TKFC;ENST00000529092.1_1_11:61106599-61106976:+|nuORF;nc|ENSG00000149476|Q3LXA3-2|TKFC	38.80614096846853	0.43426287593479557	5				NaN	NaN	0	NaN	4187	3462	7649
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7652	24.508	NaN	3668.1	30	0	733.06	0.106	+			46288	VEIAKQSV	8	58	437.25498349826205	872.4954140633241	2	437.2554626464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VEIAKQSV_	ENSG00000113558|ENST00000353411|SKP1;ENST00000506450.1_1_4:25624416-25624897:+|nuORF;nc|ENSG00000113558|P63208-2|SKP1	58.22992032128504	0.519305013932957	5				NaN	NaN	0	NaN	4188	3462	7649
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7653	24.51	NaN	1853	30	0	226.12	0.034	+			9237	EGTIKSVIL	9	52	480.2917562199835	958.568959506767	2	480.2911071777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EGTIKSVIL_	tr|U7SNF7|U7SNF7_FUSNUDUF5673domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01831PE=4SV=1	74.25504064058377	0.12238981753128622	5				NaN	NaN	0	NaN	4189	3462	7649
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7669	24.543	NaN	2532.3	30	0	304.13	0.214	+			11650	FQHVGKAF	8	51	467.25031206083275	932.4860711884655	2	467.2502746582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FQHVGKAF_	ENSG00000254772|ENST00000329251|EEF1G;ENST00000526409.5_1_11:62327153-62342310:-|nuORF;nc|ENSG00000254772|P26641-2|EEF1G;NCEH1-EEF1G|1|fusion	94.00642277110589	0.2653416297186628	5				NaN	NaN	0	NaN	4202	3465	7668
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7670	24.546	NaN	1223	30	0	156.35	0.106	+			113	AAETDPHKS	9	46	478.2285236635433	954.4424943938866	2	478.22857666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAETDPHKS_	ENSG00000127481|ENST00000375254|UBR4;ENST00000419533.1_1_1:19477984-19504233:-|nuORF;nc|ENSG00000127481|Q5T4S7-2|UBR4;nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000127481|Q5T4S7-4|UBR4;nc|ENSG00000127481|Q5T4S7-5|UBR4;UBR4|p.C4515Wfs*2|1|0.06|ENSG00000127481|chr1:19095626-19095626|G/-|frameshift_variant;UBR4|p.L4771Cfs*7|1|0.25|ENSG00000127481|chr1:19088878-19088878|G/-|frameshift_variant;UBR4|p.P4047Ifs*4|1|0.4|ENSG00000127481|chr1:19106932-19106933|GG/-|frameshift_variant	31.529811441608018	0.5085848003137583	5				NaN	NaN	0	NaN	4203	3465	7668
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7671	24.548	NaN	1372.4	30	0	770.9	0.106			+	41170	SVKPSEYSL	9	25	505.26367710281704	1008.5128012724341	2	505.2635803222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVKPSEYSL_	REV__ENST00000465463.1_1_1:235605175-235611824:+|nuORF	20.94693142431847	0.6074874384046576	5				NaN	NaN	0	NaN	4204	3465	7668
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7672	24.55	NaN	2122.7	30	0	330.41	0.106	+			11887	FTNEGRAL	8	49	454.2346500492012	906.4547471652024	2	454.23486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FTNEGRAL_	ENSG00000170876|ENST00000306077|TMEM43	76.7741389293348	0.3504530765139327	5				NaN	NaN	0	NaN	4205	3465	7668
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7673	24.552	NaN	1151.5	30	0	289.3	0.034	+			9241	EGTSKFANL	9	37	483.7488098144531	NaN	0	483.7488098144531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EGTSKFANL_	ENSG00000143344|ENST00000360851|RGL1;nc|ENSG00000143344|Q9NZL6-2|RGL1;RGL1|p.K583Sfs*25|1|0.84|ENSG00000143344|chr1:183912261-183912261|A/-|frameshift_variant	30.503639358989545	0.3235605894931338	5				NaN	NaN	0	NaN	4206	3465	7668
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7691	24.59	NaN	48228	30	0	20632	0.214	+			49637	VYIEKNDKL	9	69	374.5446769216872	1120.6122013652616	3	374.5447692871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYIEKNDKL_	ENSG00000065361|ENST00000267101|ERBB3;ENST00000546884.1_1_12:56474084-56480451:+|nuORF;ENST00000549472.1_1_12:56480319-56481575:+|nuORF;ERBB3|p.A805Gfs*22|1|0.1|ENSG00000065361|chr12:56097177-56097178|-/G|frameshift_variant;ERBB3|p.A805Hfs*95|1|0.33|ENSG00000065361|chr12:56097178-56097178|G/-|frameshift_variant;ERBB3|p.R1080Vfs*22|1|0.14|ENSG00000065361|chr12:56101093-56101093|C/-|frameshift_variant;nc|ENSG00000065361|P21860-3|ERBB3;nc|ENSG00000065361|P21860-4|ERBB3	104.74654710444128	0.034358562718640136	5				NaN	NaN	0	NaN	4221	3468	7690
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7692	24.593	NaN	1621.6	30	0	383.39	0.106			+	41737	SVSIALAYGG	10	37	469.25306857587583	936.4915842185517	2	469.2530822753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVSIALAYGG_	REV__ENST00000275954.3_1_X:34647786-34647951:-|nuORF	45.9519527083369	0.4943008177357963	5				NaN	NaN	0	NaN	4222	3468	7690
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7693	24.595	NaN	585.01	30	0	51.182	0.106	+			25315	LPAQQVHNY	9	48	535.2751948699191	NaN	0	535.2755126953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LPAQQVHNY_	ENSG00000137265|ENST00000380956|IRF4;ENST00000495137.5_1_6:394829-397293:+|nuORF	53.351449002276354	0.18359631779194618	5				NaN	NaN	0	NaN	4223	3468	7690
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7694	24.597	NaN	2573.6	30	0	805.76	0.106			+	39927	STMDYIGLTF	10	38	383.1816222583141	1146.5230373751424	3	383.1817321777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STMDYIGLTF_	REV__ENSG00000163291|ENST00000512733|PAQR3;REV__nc|ENSG00000163291|Q6TCH7-2|PAQR3;REV__nc|ENSG00000163291|Q6TCH7-3|PAQR3	28.081489160057373	0.6505064946289502	5				NaN	NaN	0	NaN	4224	3468	7690
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7695	24.599	NaN	2195.8	30	0	199.57	0.036			+	30211	PSRPAIPTLT	10	55	526.808172214906	1051.601791496612	2	526.8090209960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PSRPAIPTLT_	REV__ELK1|p.S383T|1|0.19|ENSG00000126767|chrX:47637053-47637053|C/G|missense_variant	38.714083909724	0.5609941533943991	5				NaN	NaN	0	NaN	4225	3468	7690
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7713	24.636	NaN	1239.4	30	0	96.709	0.215	+			18726	ITGSQIQL	8	43	430.24792045328576	NaN	0	430.2476806640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ITGSQIQL_	ENST00000502746.5_1_12:112143706-112153699:+|nuORF	68.78682469695295	1.7418937515398478	5				NaN	NaN	0	NaN	4240	3471	7712
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7714	24.64	NaN	1384.5	30	0	472.19	0.106			+	47713	VSFKLTFLP	9	29	351.2124688488803	NaN	0	350.8779602050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSFKLTFLP_	REV__ENST00000281830.3_1_2:223920011-223920131:+|nuORF	31.529811441608018	0.3183796599642538	5				NaN	NaN	0	NaN	4241	3471	7712
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7715	24.642	NaN	2265.8	30	0	390.81	0.106	+			32725	RANVAVVSGAP	11	54	520.7955355789348	1039.5765182246696	2	520.7957763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RANVAVVSGAP_	ENSG00000137575|ENST00000260130|SDCBP;ENST00000519115.5_1_8:59477592-59490768:+|nuORF;ENST00000522843.5_1_8:59477592-59488665:+|nuORF;nc|ENSG00000137575|O00560-2|SDCBP;nc|ENSG00000137575|O00560-3|SDCBP	39.252832667884924	0.5681665794958463	5				NaN	NaN	0	NaN	4242	3471	7712
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7716	24.644	NaN	925.01	30	0	233.39	0.106			+	-1	RSKISSQQM	9	21	360.8538402163593	1079.539691249278	3	360.85418701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_RSKISSQQM(Oxidation (M))_	REV__CCDC102B|p.D28N|1|0.34|ENSG00000150636|chr18:68836845-68836845|G/A|missense_variant;REV__CCDC102B|p.N420Tfs*5|3|0.26|ENSG00000150636|chr18:68897418-68897418|A/-|frameshift_variant;REV__ENSG00000150636|ENST00000360242|CCDC102B;REV__ENST00000577772.5_1_18:66504000-66564823:+|nuORF;REV__nc|ENSG00000150636|Q68D86-2|CCDC102B	23.52269567125451	0.5834155526130771	5				NaN	NaN	0	NaN	4243	3471	7712
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7717	24.645	NaN	866.36	30	0	135.04	0.106			+	51043	YLCTLLVAQ	9	48	512.2802734375	NaN	0	512.2802734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YLCTLLVAQ_	REV__CDK5R1|p.E221K|1|0.41|ENSG00000176749|chr17:32488281-32488281|G/A|missense_variant;REV__ENSG00000176749|ENST00000313401|CDK5R1;REV__ENST00000584716.1_1_17:30815096-30816294:+|nuORF	44.116797842482775	0.2472372736944149	5				NaN	NaN	0	NaN	4244	3471	7712
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7718	24.647	NaN	2817.6	30	0	743.79	0.036	+			18495	ISHFKKILA	9	36	352.8891734542392	NaN	0	352.88885498046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ISHFKKILA_	ENST00000574267.1_1_17:19463799-19467910:-|nuORF	34.172542307311794	0.30503706118289736	5				NaN	NaN	0	NaN	4245	3471	7712
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7719	24.648	NaN	1917.5	30	0	452.15	0.141				-1	LQYWTKSI	8	43	540.7931189641943	NaN	0	540.7874145507812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LQYWTKSI_	ENST00000372004.7_1_20:46282573-46282858:+|nuORF	56.72105179125745	1.7418937515398478	5				NaN	NaN	0	NaN	4246	3471	7712
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7737	24.687	NaN	2593.3	30	0	290.61	0.214	+			41724	SVSEVVVNR	9	55	494.77499602812827	NaN	0	494.775146484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSEVVVNR_	ENSG00000099821|ENST00000588649|POLRMT;ENST00000578759.1_1_17:60217316-60217976:-|nuORF	124.08010499294276	0.0015010289275841425	5				NaN	NaN	0	NaN	4261	3474	7736
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7738	24.691	NaN	3833.5	30	0	737.65	0.034	+			11855	FTAPSTVGK	9	50	454.2478322018134	906.4811114704269	2	454.24798583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FTAPSTVGK_	ENSG00000140694|ENST00000437198|PARN;nc|ENSG00000140694|O95453-2|PARN;nc|ENSG00000140694|O95453-3|PARN;nc|ENSG00000140694|O95453-4|PARN	77.31757898189308	0.1091473830098891	5				NaN	NaN	0	NaN	4262	3474	7736
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7756	24.727	NaN	1174.9	30	0	829.02	0.214				-1	 	0	13	322.1934555438265	642.372358154453	2	322.1937561035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4277	3477	7755
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7757	24.731	NaN	1660.8	30	0	380.16	0.033			+	18271	IPHSNTSI	8	43	434.72953654176604	867.4445201503321	2	434.7301330566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IPHSNTSI_	REV__ENSG00000138081|ENST00000403359|FBXO11;REV__nc|ENSG00000138081|Q86XK2-5|FBXO11;REV__nc|ENSG00000138081|Q86XK2-6|FBXO11	94.00642277110589	0.2653416297186628	5				NaN	NaN	0	NaN	4278	3477	7755
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7775	24.768	NaN	9766.8	30	0	1318.4	0.214			+	8791	EEKAEEWGGVT	11	79	412.1898435499259	1233.5477012499778	3	412.18994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EEKAEEWGGVT_	REV__ENST00000305123.5_1_2:227663749-227664043:-|nuORF	34.08650109265054	0.6322515996262609	5				NaN	NaN	0	NaN	4293	3480	7774
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7776	24.772	NaN	1026.5	30	0	279.99	0.106			+	13604	GLVVVCFEN	9	43	490.2499062025151	978.4852594718302	2	490.2469482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GLVVVCFEN_	REV__ENSG00000141449|ENST00000424526|GREB1L;REV__ENST00000578368.5_1_18:18963479-19048745:+|nuORF;REV__ENST00000580683.1_1_18:19029709-19031123:+|nuORF;REV__ENST00000584446.5_1_18:18963479-19034595:+|nuORF;REV__GREB1L|p.G1039Qfs*16|1|0.06|ENSG00000141449|chr18:21495754-21495755|GG/-|frameshift_variant;REV__GREB1L|p.T1038Kfs*19|1|0.06|ENSG00000141449|chr18:21495751-21495752|-/AACT|frameshift_variant;REV__nc|ENSG00000141449|Q9C091-4|GREB1L	37.15910966729921	0.4535818937225704	5				NaN	NaN	0	NaN	4294	3480	7774
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7777	24.774	NaN	1731.2	30	0	497.33	0.041				-1	SQLSQCKQRYQ	11	43	475.9036560058594	NaN	0	475.9036560058594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SQLSQC(Carbamidomethyl (C))KQRYQ_	ENSG00000178104|ENST00000695795|PDE4DIP;nc|ENSG00000178104|Q5VU43-3|PDE4DIP;nc|ENSG00000178104|Q5VU43-4|PDE4DIP;nc|ENSG00000178104|Q5VU43|PDE4DIP	14.77880738573525	0.456735970842152	5				NaN	NaN	0	NaN	4295	3480	7774
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7795	24.811	NaN	5762.4	30	0	1838.2	0.214	+			4311	ATGKLFAVK	9	64	467.7896011372057	933.5646493412114	2	467.7898254394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATGKLFAVK_	ENSG00000183049|ENST00000619168|CAMK1D;nc|ENSG00000183049|Q8IU85-2|CAMK1D	85.16082228582465	0.07850854922700509	5				NaN	NaN	0	NaN	4310	3483	7794
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7796	24.815	NaN	1324.3	30	0	282.9	0.106	+			26129	LSPNHAQL	8	43	440.2376600595836	NaN	0	440.23773193359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSPNHAQL_	ENSG00000101353|ENST00000343811|MROH8;MROH8|p.F768Lfs*38|1|0.13|ENSG00000101353|chr20:37120510-37120510|A/-|frameshift_variant;MROH8|p.N894Tfs*7|1|0.08|ENSG00000101353|chr20:37114081-37114081|T/-|frameshift_variant	37.15910966729921	1.7418937515398478	5				NaN	NaN	0	NaN	4311	3483	7794
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7797	24.817	NaN	688.88	30	0	56.567	0.035	+			16539	HEVLVTTKV	9	38	513.3040161132812	NaN	0	513.3040161132812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HEVLVTTKV_	DHX40|p.A681T|1|0.17|ENSG00000108406|chr17:59605515-59605515|G/A|missense_variant;ENSG00000108406|ENST00000251241|DHX40;nc|ENSG00000108406|Q8IX18-2|DHX40;nc|ENSG00000108406|Q8IX18-3|DHX40;nc|ENSG00000108406|Q8IX18-4|DHX40	24.519189625965996	0.35377483217337163	5				NaN	NaN	0	NaN	4312	3483	7794
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7815	24.854	NaN	34095	30	0	10661	0.214	+			41770	SVSNVVITK	9	74	473.78181097952677	945.5490690258536	2	473.7817687988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSNVVITK_	ENSG00000085832|ENST00000371733|EPS15;EPS15|p.R789Dfs*14|1|0.37|ENSG00000085832|chr1:51361350-51361350|T/-|frameshift_variant;nc|ENSG00000085832|P42566-2|EPS15	195.57289506066198	5.204600901213804E-05	5				NaN	NaN	0	NaN	4327	3486	7814
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7816	24.858	NaN	2675.3	30	0	479.62	0.106	+			39939	STMGYMAAK	9	51	480.2192888338347	958.4240247344694	2	480.2196960449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STMGYMAAK_	ENSG00000080824|ENST00000216281|HSP90AA1;ENST00000436135.1_1_1:158495283-158495625:+|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1	84.9155231211612	0.07920012719736333	5				NaN	NaN	0	NaN	4328	3486	7814
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7817	24.86	NaN	1979	30	0	450.84	0.106	+			45079	TVICSTINK	9	58	518.2785671467178	1034.5425813602355	2	518.279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_TVIC(Carbamidomethyl (C))STINK_	ACTR3B-JMJD1C|1|fusion;ENSG00000171988|ENST00000399262|JMJD1C;JMJD1C|p.A2114Cfs*5|1|0.04|ENSG00000171988|chr10:63189399-63189400|-/T|frameshift_variant;JMJD1C|p.I2113Kfs*18|1|0.04|ENSG00000171988|chr10:63189400-63189401|-/TT|frameshift_variant;nc|ENSG00000171988|Q15652-2|JMJD1C;nc|ENSG00000171988|Q15652-3|JMJD1C	82.7504851949679	0.08565546331141553	5				NaN	NaN	0	NaN	4329	3486	7814
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7818	24.862	NaN	6642.7	30	0	3031.9	0.106	+			4232	ATGDMSGLLK	10	59	504.75501512534	1007.49547731748	2	504.75518798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_ATGDM(Oxidation (M))SGLLK_	ENSG00000127837|ENST00000248450|AAMP;ENST00000475678.5_1_2:219131145-219134809:-|nuORF;ENST00000489767.5_1_2:219130391-219134818:-|nuORF	109.47833844074708	0.04954876308859735	5				NaN	NaN	0	NaN	4330	3486	7814
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7819	24.864	NaN	1994.3	30	0	623.78	0.106			+	-1	QNVCCLHIT	9	36	363.17236328125	NaN	0	363.17236328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_QNVC(Carbamidomethyl (C))CLHIT_	REV__DEFB135|p.P68Q|1|0.38|ENSG00000205883|chr8:11984559-11984559|C/A|missense_variant	25.57405402267927	0.3484490411150625	5				NaN	NaN	0	NaN	4331	3486	7814
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7820	24.865	NaN	1374.8	30	0	617.43	0.032	+			43487	TGPEGHVL	8	37	405.21089025698876	808.4072275807775	2	405.2113952636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TGPEGHVL_	DPYSL3|p.A516Qfs*15|1|0.31|ENSG00000113657|chr5:147395638-147395638|G/-|frameshift_variant;ENSG00000092964|ENST00000521913|DPYSL2;ENSG00000113657|ENST00000343218|DPYSL3;ENSG00000151640|ENST00000338492|DPYSL4;ENST00000521983.1_1_8:26484742-26500445:+|nuORF;nc|ENSG00000092964|Q16555-2|DPYSL2;nc|ENSG00000092964|Q16555|DPYSL2;nc|ENSG00000113657|Q14195|DPYSL3	40.5726180659479	0.6527593143185008	5				NaN	NaN	0	NaN	4332	3486	7814
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7838	24.903	NaN	5077.8	30	0	1841.6	0.215	+			46481	VETGVLKPG	9	53	450.2630105276016	898.5114681220032	2	450.2631530761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VETGVLKPG_	ENSG00000156508|ENST00000309268|EEF1A1;ENST00000436459.2_1_9:135895553-135896258:+|nuORF;ENST00000450915.1_1_7:88268512-88269193:+|nuORF;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	98.62937762414208	0.04060045538121712	5				NaN	NaN	0	NaN	4347	3489	7837
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7839	24.906	NaN	1243.1	30	0	127.36	0.106	+			22187	KSSVNSAVLK	10	51	516.8064575195312	NaN	0	516.8064575195312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KSSVNSAVLK_	CKAP2L|p.T478Pfs*15|1|0.25|ENSG00000169607|chr2:112752437-112752437|T/-|frameshift_variant;CKAP2L|p.T618Lfs*3|1|0.37|ENSG00000169607|chr2:112740978-112740978|T/-|frameshift_variant;ENSG00000169607|ENST00000302450|CKAP2L;nc|ENSG00000169607|Q8IYA6-3|CKAP2L	55.08391021199286	0.27346126051334796	5				NaN	NaN	0	NaN	4348	3489	7837
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7840	24.908	NaN	2723.4	30	0	623.7	0.106			+	2017	AKLTAGKVE	9	48	458.77636429154677	915.5381756498936	2	458.7761535644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AKLTAGKVE_	REV__ENST00000338910.8_1_13:20277187-20277373:-|nuORF	58.22992032128504	0.22837015374068087	5				NaN	NaN	0	NaN	4349	3489	7837
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7841	24.91	NaN	1061.9	30	0	62.814	0.034	+			15491	GVAKIIISK	9	52	464.8124084472656	NaN	0	464.8124084472656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GVAKIIISK_	ENSG00000125686|ENST00000300651|MED1	36.446750945000026	0.29355505452396785	5				NaN	NaN	0	NaN	4350	3489	7837
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7859	24.948	NaN	15047	30	0	2699.3	0.214	+			43219	TEVKSVEM	8	78	461.7309284363163	921.4473039394326	2	461.7308654785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEVKSVEM_	ENSG00000101210|ENST00000217182|EEF1A2;ENSG00000156508|ENST00000309268|EEF1A1;ENST00000436459.2_1_9:135895553-135896258:+|nuORF;ENST00000447052.1_1_21:24762753-24763314:+|nuORF;ENST00000547505.2_1_12:44054314-44054545:+|nuORF;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	98.62937762414208	0.25143494708580966	5				NaN	NaN	0	NaN	4365	3492	7858
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7860	24.951	NaN	2398.6	30	0	509.24	0.106	+			10059	ESGFSKSI	8	52	427.7161180168295	NaN	0	427.7163391113281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ESGFSKSI_	CELSR2-KIAA1324|1|fusion;ENSG00000116299|ENST00000369939|ELAPOR1;ENST00000369936.2_1_1:109730792-109745631:+|nuORF;ENST00000369938.5_1_1:109730226-109745631:+|nuORF;ENST00000527996.5_1_1:109656894-109745573:+|nuORF;nc|ENSG00000116299|Q6UXG2-2|ELAPOR1;nc|ENSG00000116299|Q6UXG2-3|ELAPOR1;nc|ENSG00000116299|Q6UXG2-4|ELAPOR1	71.29570347882199	1.7418937515398478	5				NaN	NaN	0	NaN	4366	3492	7858
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7861	24.953	NaN	2437	30	0	289.3	0.106			+	24103	LEKKTIADL	9	59	515.8099975585938	NaN	0	515.8099975585938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LEKKTIADL_	REV__tr|U7SL85|U7SL85_FUSNUABCtransporterdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02014PE=4SV=1	72.87924865735499	0.09578366712754152	5				NaN	NaN	0	NaN	4367	3492	7858
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7862	24.955	NaN	2375	30	0	349.56	0.106	+			32737	RAPDVARAL	9	56	484.7852886693312	967.5560244054624	2	484.78546142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RAPDVARAL_	ENSG00000188157|ENST00000379370|AGRN;nc|ENSG00000188157|O00468-2|AGRN;nc|ENSG00000188157|O00468-3|AGRN;nc|ENSG00000188157|O00468-4|AGRN;nc|ENSG00000188157|O00468-5|AGRN;nc|ENSG00000188157|O00468-7|AGRN;nc|ENSG00000188157|O00468|AGRN	28.081489160057373	0.5408112046645406	5				NaN	NaN	0	NaN	4368	3492	7858
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7863	24.957	NaN	3932.6	30	0	601.46	0.106				-1	ECWRMWKFPRD	11	57	542.9155062534767	1625.7246893606298	3	543.2510375976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C),Oxidation (M)	_EC(Carbamidomethyl (C))WRM(Oxidation (M))WKFPRD_	ENST00000253693.6_1_3:15288844-15288901:+|nuORF	9.64613948735714	0.8253219237127141	5				NaN	NaN	0	NaN	4369	3492	7858
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7864	24.959	NaN	1573.5	30	0	501.61	0.037			+	2829	ASAFCGPI	8	32	383.1838758069486	NaN	0	383.18408203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASAFCGPI_	REV__ENSG00000112357|ENST00000318471|PEX7;REV__nc|ENSG00000112357|O00628-2|PEX7	21.70233525837049	1.7418937515398478	5				NaN	NaN	0	NaN	4370	3492	7858
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7882	24.996	NaN	1850.4	30	0	618.02	0.214	+			44402	TSLNEVFLN	9	41	518.7715925867961	NaN	0	518.7715454101562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSLNEVFLN_	ABCA10|p.I1054Yfs*16|1|0.22|ENSG00000154263|chr17:69174283-69174284|-/A|frameshift_variant;ENSG00000154263|ENST00000690296|ABCA10;nc|ENSG00000154263|Q8WWZ4-2|ABCA10	42.396135135203025	0.2590952873412954	5				NaN	NaN	0	NaN	4385	3495	7881
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7883	25	NaN	1350.4	30	0	103.37	0.106	+			1372	AEVKEKVVL	9	51	507.8133544921875	NaN	0	507.8133544921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEVKEKVVL_	ENSG00000118898|ENST00000345988|PPL;PPL|p.K1530Gfs*18|1|0.27|ENSG00000118898|chr16:4884058-4884068|GCTCGCGCTTG/-|frameshift_variant	77.31757898189308	0.08057531075035683	5				NaN	NaN	0	NaN	4386	3495	7881
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7884	25.002	NaN	1708.2	30	0	409.28	0.035				-1	MLVPCFLY	8	47	514.2515916511413	NaN	0	514.2514038085938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))MLVPCFLY_	nc|ENSG00000175575|Q9BRP4-2|PAAF1	24.504012794735996	1.7418937515398478	5				NaN	NaN	0	NaN	4387	3495	7881
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7902	25.039	NaN	2716.8	30	0	810.9	0.214	+			46081	VCSRASSPI	9	49	460.2366251592817	918.4586973853634	2	460.2371826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VCSRASSPI_	nc|ENSG00000242372|P56537-2|EIF6	73.97473282117947	0.12360187025703594	5				NaN	NaN	0	NaN	4402	3498	7901
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7903	25.043	NaN	2855.1	30	0	756.66	0.106	+			44760	TTNDIVISK	9	54	495.7772418551601	989.5399307771203	2	495.7771911621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTNDIVISK_	ENSG00000113141|ENST00000417647|IK	83.6470233535746	0.08277643980271215	5				NaN	NaN	0	NaN	4403	3498	7901
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7904	25.045	NaN	5134.4	30	0	2587.3	0.036	+			32287	QTMSDTTFK	9	48	529.7449854140197	1057.4754178948392	2	529.746337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QTMSDTTFK_	ENSG00000116489|ENST00000263168|CAPZA1;ENSG00000198898|ENST00000361183|CAPZA2;ENST00000426421.5_1_7:116544367-116557918:+|nuORF;ENST00000466066.1_1_1:113202257-113212751:+|nuORF;ENST00000565906.2_1_15:89532752-89533049:-|nuORF	61.691277971877994	0.19951612995419254	5				NaN	NaN	0	NaN	4404	3498	7901
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7922	25.082	NaN	2402.3	30	0	690.49	0.214	+			39330	STAVGLVTK	9	48	438.2637401470641	874.5129273609282	2	438.26385498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STAVGLVTK_	ASH1L|p.H1793Ifs*7|1|0.13|ENSG00000116539|chr1:155438778-155438778|G/-|frameshift_variant;ASH1L|p.I970Lfs*9|1|0.2|ENSG00000116539|chr1:155479962-155479962|T/-|frameshift_variant;ASH1L|p.K1222Rfs*11|4|0.27|ENSG00000116539|chr1:155479205-155479205|T/-|frameshift_variant;ASH1L|p.K1533Sfs*17|1|0.25|ENSG00000116539|chr1:155478272-155478272|T/-|frameshift_variant;ASH1L|p.K2377Nfs*5|1|0.28|ENSG00000116539|chr1:155354570-155354570|T/-|frameshift_variant;ASH1L|p.N1822Tfs*2|1|0.33|ENSG00000116539|chr1:155438690-155438690|T/-|frameshift_variant;ASH1L|p.R712Efs*23|3|0.35|ENSG00000116539|chr1:155480736-155480736|T/-|frameshift_variant;ASH1L|p.S2309Ifs*11|1|0.64|ENSG00000116539|chr1:155357635-155357636|-/T|frameshift_variant;ENSG00000116539|ENST00000392403|ASH1L;nc|ENSG00000116539|Q9NR48|ASH1L	75.04331003522576	0.118981335847003	5				NaN	NaN	0	NaN	4419	3501	7921
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7923	25.086	NaN	1623.4	30	0	480.78	0.106	+			1605	AGLPIPRVPSE	11	38	379.2205505371094	NaN	0	379.2205505371094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AGLPIPRVPSE_	tr|U7SF62|U7SF62_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02344PE=4SV=1	24.231819034082204	0.456735970842152	5				NaN	NaN	0	NaN	4420	3501	7921
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7924	25.088	NaN	1814.9	30	0	108.82	0.036	+			16402	HEQSRIITV	9	65	541.8029917137616	NaN	0	541.8029174804688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HEQSRIITV_	ENSG00000158006|ENST00000374282|PAFAH2	58.22992032128504	0.15686832049467786	5				NaN	NaN	0	NaN	4421	3501	7921
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7941	25.123	NaN	9434	30	0	2439.1	0.214	+			39203	STAAVGVLK	9	61	423.2583951238019	844.5022373144038	2	423.2584533691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STAAVGVLK_	ENSG00000081019|ENST00000261441|RSBN1;ENST00000476412.5_1_1:114308604-114340019:-|nuORF	98.62937762414208	0.04060045538121712	5				NaN	NaN	0	NaN	4435	3504	7940
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7942	25.127	NaN	2949.7	30	0	653.06	0.106	+			9694	EMAPQSVSPR	10	50	551.2713746717575	1100.5281964103149	2	551.2726440429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EMAPQSVSPR_	ENSG00000117707|ENST00000366958|PROX1	31.529811441608018	0.6223461015008678	5				NaN	NaN	0	NaN	4436	3504	7940
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7943	25.129	NaN	1604	30	0	345.8	0.106	+			26390	LTEAPLNPK	9	49	491.78175073906027	981.5489485449206	2	491.7820129394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LTEAPLNPK_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000403258.1_1_6:88986231-88986483:-|nuORF;ENST00000446382.2_1_9:6834760-6835018:+|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000502306.1_1_5:15450853-15451165:+|nuORF;ENST00000567299.1_1_19:9629420-9629708:+|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;nc|ENSG00000204434|Q9BYX7|POTEKP	69.6276240434122	0.14239879520340665	5				NaN	NaN	0	NaN	4437	3504	7940
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7944	25.13	NaN	1971.9	30	0	343.96	0.106	+			16147	HEAELMRK	8	58	507.26250269884264	NaN	0	507.26226806640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HEAELMRK_	CDH23|p.F3223Lfs*43|1|0.34|ENSG00000107736|chr10:71812773-71812773|T/-|frameshift_variant;ENSG00000107736|ENST00000224721|CDH23;nc|ENSG00000107736|Q9H251-2|CDH23;nc|ENSG00000107736|Q9H251-3|CDH23;nc|ENSG00000107736|Q9H251-4|CDH23;nc|ENSG00000107736|Q9H251-6|CDH23;nc|ENSG00000107736|Q9H251-8|CDH23	63.30626980617807	1.7418937515398478	5				NaN	NaN	0	NaN	4438	3504	7940
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7945	25.132	NaN	764.88	30	0	76.144	0.035	+			8334	EAKRLEEL	8	49	494.2774963378906	NaN	0	494.2774963378906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EAKRLEEL_	CEP295|p.F1469Yfs*47|1|0.31|ENSG00000166004|chr11:93699317-93699318|-/ATCCAGCC|frameshift_variant;CEP295|p.L2479Ffs*6|1|0.29|ENSG00000166004|chr11:93729651-93729651|A/-|frameshift_variant;CEP295|p.S1014Yfs*28|1|0.44|ENSG00000166004|chr11:93697948-93697957|AAAATCTGGA/-|frameshift_variant;CEP295|p.T553Lfs*15|1|0.55|ENSG00000166004|chr11:93695613-93695613|A/-|frameshift_variant;ENSG00000166004|ENST00000325212|CEP295;nc|ENSG00000166004|Q9C0D2-3|CEP295	42.396135135203025	1.7418937515398478	5				NaN	NaN	0	NaN	4439	3504	7940
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7963	25.17	NaN	916.49	30	0	71.817	0.143	+			11059	FEQKAAQL	8	44	467.7538794141766	933.4932058951532	2	467.75347900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FEQKAAQL_	EEA1|p.K257Nfs*13|2|0.34|ENSG00000102189|chr12:92851138-92851138|T/-|frameshift_variant;EEA1|p.N1389Mfs*3|1|0.33|ENSG00000102189|chr12:92776081-92776081|T/-|frameshift_variant;ENSG00000102189|ENST00000322349|EEA1	40.77816245573522	0.6514838689002179	5				NaN	NaN	0	NaN	4454	3507	7962
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7981	25.209	NaN	5195.1	30	0	577.73	0.214			+	28300	NEEGIIDIV	9	70	501.26196161008676	1000.5093702869735	2	501.2613220214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NEEGIIDIV_	REV__tr|U7T745|U7T745_FUSNUHTHcro/C1-typedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00111PE=4SV=1	52.936696900407355	0.27249468807391813	5				NaN	NaN	0	NaN	4469	3510	7980
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7982	25.212	NaN	1401.9	30	0	461.32	0.033			+	23787	LCLRGPHS	8	46	441.73258513641326	NaN	0	441.7323913574219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LCLRGPHS_	REV__ENSG00000184022|ENST00000642090|OR2T10;REV__ENST00000569028.2_1_16:34712339-34712507:-|nuORF;REV__OR2T10|p.S230Hfs*6|1|0.05|ENSG00000184022|chr1:248593082-248593083|-/AAAGATATGA|frameshift_variant	33.51558372728122	1.7418937515398478	5				NaN	NaN	0	NaN	4470	3510	7980
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8000	25.249	NaN	3786.5	30	0	466.57	0.214			+	7562	DIATLDPKK	9	68	500.7877788135925	999.5610046939851	2	500.7879333496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DIATLDPKK_	REV__ANKRD62|p.L785Cfs*20|1|0.67|ENSG00000181626|chr18:12126174-12126174|T/-|frameshift_variant;REV__ENSG00000181626|ENST00000587848|ANKRD62	34.172542307311794	0.4838870758800184	5				NaN	NaN	0	NaN	4485	3513	7999
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8001	25.253	NaN	2400.2	30	0	676.93	0.106	+			45212	TVNSPAIYK	9	57	496.774124744577	991.5336965559541	2	496.7745056152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVNSPAIYK_	ENSG00000183520|ENST00000373014|UTP11;ENST00000488453.1_1_1:38483328-38489297:+|nuORF	69.6276240434122	0.14239879520340665	5				NaN	NaN	0	NaN	4486	3513	7999
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8002	25.255	NaN	1449	30	0	192.09	0.033	+			43584	TIGSQVATL	9	47	445.25293500111917	NaN	0	445.25341796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TIGSQVATL_	nc|ENSG00000163110|Q96HC4-6|PDLIM5	49.44154591367651	0.21054156626303966	5				NaN	NaN	0	NaN	4487	3513	7999
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8020	25.292	NaN	5706.8	30	0	1454.1	0.214	+			41479	SVNSTVLVK	9	61	473.78175550621796	945.548958079236	2	473.7818298339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVNSTVLVK_	ENSG00000160593|ENST00000356289|JAML;nc|ENSG00000160593|Q86YT9-2|JAML;nc|ENSG00000160593|Q86YT9-4|JAML	123.20810148215591	0.019257656778428764	5				NaN	NaN	0	NaN	4502	3516	8019
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8021	25.296	NaN	4489	30	0	1220.1	0.106			+	16734	HLLNLKAE	8	53	469.2768346595284	936.5391163858568	2	469.27655029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HLLNLKAE_	REV__ENSG00000169918|ENST00000307050|OTUD7A;REV__nc|ENSG00000169918|Q8TE49|OTUD7A;REV__OTUD7A|p.V467Cfs*62|1|0.44|ENSG00000169918|chr15:31484676-31484676|C/-|frameshift_variant	74.25504064058377	0.37144338840759816	5				NaN	NaN	0	NaN	4503	3516	8019
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8022	25.298	NaN	2486.1	30	0	603.01	0.106	+			39098	SSSTVSYLK	9	41	486.2554204555088	970.4962879778176	2	486.2557067871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSSTVSYLK_	ABCA1|p.L2013*|1|0.14|ENSG00000165029|chr9:104788457-104788457|A/-|frameshift_variant;ENSG00000165029|ENST00000374736|ABCA1	60.11826168202944	0.21262886028301267	5				NaN	NaN	0	NaN	4504	3516	8019
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8023	25.3	NaN	1541.5	30	0	149.34	0.036	+			10461	EVNPNTRVM	9	45	530.2666554180184	NaN	0	530.2658081054688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EVNPNTRVM_	ENSG00000123353|ENST00000243045|ORMDL2;ENSG00000128699|ENST00000392349|ORMDL1;ENSG00000172057|ENST00000304046|ORMDL3;nc|ENSG00000172057|Q8N138-4|ORMDL3	35.61828744233558	0.29773779453147337	5				NaN	NaN	0	NaN	4505	3516	8019
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8041	25.337	NaN	4236.9	30	0	1684.8	0.214	+			4287	ATGGTFVVK	9	55	440.24988760653696	878.4852222798739	2	440.2498779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATGGTFVVK_	ENSG00000198208|ENST00000557413|RPS6KL1;ENST00000555834.5_1_14:75375979-75389943:-|nuORF;nc|ENSG00000198208|Q9Y6S9-2|RPS6KL1;nc|ENSG00000198208|Q9Y6S9-4|RPS6KL1	93.1432384553994	0.056003526918089595	5				NaN	NaN	0	NaN	4520	3519	8040
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8042	25.341	NaN	4002.2	30	0	737.56	0.106	+			45200	TVNPQFVQK	9	63	530.7920258001081	1059.5694986670162	2	530.792724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVNPQFVQK_	ENSG00000141030|ENST00000268717|COPS3;ENST00000486032.1_1_17:17150414-17150880:-|nuORF;nc|ENSG00000141030|Q9UNS2-2|COPS3	49.536043120802724	0.308405419312776	5				NaN	NaN	0	NaN	4521	3519	8040
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8043	25.343	NaN	3006.1	30	0	1174.3	0.106			+	48577	VTQHPPPRV	9	45	515.792938985281	1029.571325037362	2	515.7930908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTQHPPPRV_	REV__ENST00000392038.6_1_19:40738806-40739223:-|nuORF	29.14955571784316	0.5308295550522326	5				NaN	NaN	0	NaN	4522	3519	8040
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8044	25.344	NaN	2090.1	30	0	517	0.106			+	30618	QASALSITY	9	45	477.250400124694	952.486247316188	2	477.2508239746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QASALSITY_	REV__ENSG00000125879|ENST00000246081|OTOR;REV__OTOR|p.D49N|1|0.15|ENSG00000125879|chr20:16748896-16748896|G/A|missense_variant	87.75429964447693	0.0711966946989736	5				NaN	NaN	0	NaN	4523	3519	8040
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8045	25.346	NaN	1176.1	30	0	130.81	0.036	+			16931	HPNDDDVHF	9	50	548.2286253519071	NaN	0	548.2283325195312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HPNDDDVHF_	ENSG00000114127|ENST00000392981|XRN1;nc|ENSG00000114127|Q8IZH2-3|XRN1;nc|ENSG00000114127|Q8IZH2|XRN1;XRN1|p.L525Yfs*9|1|0.08|ENSG00000114127|chr3:142414154-142414154|A/-|frameshift_variant;XRN1|p.L671*|1|0.28|ENSG00000114127|chr3:142403765-142403765|A/-|frameshift_variant;XRN1|p.L671Ffs*2|1|0.14|ENSG00000114127|chr3:142403764-142403765|-/AA|frameshift_variant;XRN1|p.M1309Cfs*14|1|0.4|ENSG00000114127|chr3:142335462-142335462|T/-|frameshift_variant;XRN1|p.R1611Gfs*34|5|0.22|ENSG00000114127|chr3:142311801-142311801|T/-|frameshift_variant	54.776311868738084	0.17377682019723872	5				NaN	NaN	0	NaN	4524	3519	8040
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8063	25.384	NaN	7745.7	30	0	791.62	0.214	+			34697	RVTPFILKK	9	66	367.90947328767106	1100.7065904632132	3	367.90936279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVTPFILKK_	ENSG00000175768|ENST00000321301|TOMM5;ENST00000354833.7_1_5:70213930-70214023:+|nuORF	90.60085204095205	0.06317133949006545	5				NaN	NaN	0	NaN	4539	3522	8062
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8064	25.387	NaN	3300.6	30	0	518.4	0.035	+			9747	ENEIRIAY	8	61	504.260320268885	1006.50608760457	2	504.25970458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ENEIRIAY_	ENSG00000203970|ENST00000371148|DEFB110	39.252832667884924	0.6609488554722044	5				NaN	NaN	0	NaN	4540	3522	8062
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8082	25.424	NaN	2504	30	0	369.21	0.214	+			34698	RVTPFILKK	9	61	551.3605934506551	1100.70663396811	2	551.3617553710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVTPFILKK_	ENSG00000175768|ENST00000321301|TOMM5;ENST00000354833.7_1_5:70213930-70214023:+|nuORF	53.08895987439943	0.27122541748218487	5				NaN	NaN	0	NaN	4555	3525	8081
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8083	25.427	NaN	1533	30	0	164.79	0.106	+			36962	SILVVAGSGG	10	45	430.2478335552057	858.4811141772115	2	430.2478332519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SILVVAGSGG_	ENSG00000172339|ENST00000370205|ALG14;ENST00000495856.1_1_1:95507120-95538397:-|nuORF	39.252832667884924	0.5560298534376815	5				NaN	NaN	0	NaN	4556	3525	8081
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8084	25.429	NaN	1198.6	30	0	217.9	0.106			+	38456	SSAQKLVP	8	44	415.2421875	NaN	0	415.2421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSAQKLVP_	REV__nc|ENSG00000167491|Q86YP4-2|GATAD2A	30.503639358989545	1.7418937515398478	5				NaN	NaN	0	NaN	4557	3525	8081
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8085	25.431	NaN	796.09	30	0	229.06	0.106	+			16829	HPDSRAIMY	9	42	545.2617784735161	NaN	0	545.26123046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HPDSRAIMY_	ENSG00000116062|ENST00000234420|MSH6;MSH6|p.F882Lfs*24|1|0.31|ENSG00000116062|chr2:47800626-47800626|T/-|frameshift_variant;MSH6|p.G1105Wfs*3|2|0.25|ENSG00000116062|chr2:47803552-47803553|-/T|frameshift_variant;nc|ENSG00000116062|P52701-2|MSH6;nc|ENSG00000116062|P52701-3|MSH6;nc|ENSG00000116062|P52701-4|MSH6	25.57405402267927	0.3484490411150625	5				NaN	NaN	0	NaN	4558	3525	8081
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8086	25.433	NaN	810.57	30	0	164.22	0.033	+			43353	TGDIVTVAAG	10	43	452.24298421887227	NaN	0	452.24298095703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TGDIVTVAAG_	CDH4|p.G523Rfs*13|1|0.22|ENSG00000179242|chr20:61923636-61923637|-/C|frameshift_variant;CDH4|p.Y862Mfs*22|2|0.33|ENSG00000179242|chr20:61936770-61936770|C/-|frameshift_variant;ENSG00000179242|ENST00000614565|CDH4;nc|ENSG00000179242|P55283-2|CDH4	56.72105179125745	0.2610545891966633	5				NaN	NaN	0	NaN	4559	3525	8081
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8104	25.47	NaN	1754.2	30	0	218.98	0.214	+			20279	KENQVIVRM	9	52	558.8145751953125	NaN	0	558.8145751953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KENQVIVRM_	ENSG00000104413|ENST00000433389|ESRP1;ESRP1|p.L333Sfs*55|1|0.35|ENSG00000104413|chr8:94668009-94668009|G/-|frameshift_variant;ESRP1|p.N512Hfs*7|2|0.33|ENSG00000104413|chr8:94674383-94674384|AA/-|frameshift_variant;ESRP1|p.N512Kfs*8|1|0.48|ENSG00000104413|chr8:94674382-94674383|-/A|frameshift_variant;ESRP1|p.N512Tfs*2|2|0.36|ENSG00000104413|chr8:94674383-94674383|A/-|frameshift_variant;nc|ENSG00000104413|Q6NXG1-2|ESRP1;nc|ENSG00000104413|Q6NXG1-3|ESRP1;nc|ENSG00000104413|Q6NXG1-4|ESRP1;nc|ENSG00000104413|Q6NXG1-5|ESRP1	87.69643885390035	0.04624013146650493	5				NaN	NaN	0	NaN	4574	3528	8103
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8105	25.474	NaN	1030.2	30	0	180.5	0.106	+			26391	LTEAPLNPK	9	42	491.78175073906027	981.5489485449206	2	491.7821350097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LTEAPLNPK_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000403258.1_1_6:88986231-88986483:-|nuORF;ENST00000446382.2_1_9:6834760-6835018:+|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000502306.1_1_5:15450853-15451165:+|nuORF;ENST00000567299.1_1_19:9629420-9629708:+|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;nc|ENSG00000204434|Q9BYX7|POTEKP	74.25504064058377	0.12238981753128622	5				NaN	NaN	0	NaN	4575	3528	8103
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8106	25.476	NaN	857.62	30	0	163.34	0.106	+			44750	TTMQALAEK	9	38	496.7570495605469	NaN	0	496.7570495605469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TTMQALAEK_	ENSG00000166037|ENST00000325542|CEP57;ENST00000539855.5_1_11:95532492-95564417:+|nuORF;nc|ENSG00000166037|Q86XR8-2|CEP57;nc|ENSG00000166037|Q86XR8-3|CEP57;nc|ENSG00000166037|Q86XR8-4|CEP57;nc|ENSG00000166037|Q86XR8-5|CEP57	32.75053402867276	0.3122164853807509	5				NaN	NaN	0	NaN	4576	3528	8103
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8107	25.478	NaN	777.14	30	0	165.78	0.034			+	41924	SVVLAFGNL	9	39	460.2656142834502	NaN	0	460.2648620605469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVVLAFGNL_	REV__AHRR|p.S281Lfs*64|1|0.44|ENSG00000063438|chr5:427922-427923|-/C|frameshift_variant;REV__ENSG00000063438|ENST00000684583|AHRR;REV__nc|ENSG00000063438|A9YTQ3-2|AHRR;REV__nc|ENSG00000063438|A9YTQ3-3|AHRR;REV__nc|ENSG00000063438|A9YTQ3|AHRR	34.172542307311794	0.30503706118289736	5				NaN	NaN	0	NaN	4577	3528	8103
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8124	25.512	NaN	5105	30	0	1861.4	0.214	+			5492	AVADAVIEK	9	51	458.26069393869545	914.5068349441909	2	458.2613525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVADAVIEK_	ENSG00000116874|ENST00000235521|WARS2;ENST00000369426.9_1_1:119575536-119588262:-|nuORF	109.47833844074708	0.029530294723441826	5				NaN	NaN	0	NaN	4591	3531	8123
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8125	25.516	NaN	2528.8	30	0	262.49	0.035	+			7827	DPVEPHGEM	9	57	505.7159110819506	1009.4172692307012	2	505.7163391113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DPVEPHGEM_	ENSG00000130726|ENST00000253024|TRIM28;ENST00000601150.5_1_19:59059168-59060232:+|nuORF;nc|ENSG00000130726|Q13263-2|TRIM28	73.97473282117947	0.12360187025703594	5				NaN	NaN	0	NaN	4592	3531	8123
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8135	25.538	NaN	969.06	30	0	205.3	0.142	+			23303	KYPLGRQI	8	41	487.79217395515747	973.569794977115	2	487.7923583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KYPLGRQI_	ENSG00000135336|ENST00000392844|ORC3;ENST00000528393.1_1_11:79699709-79699943:+|nuORF;nc|ENSG00000135336|Q9UBD5-2|ORC3;nc|ENSG00000135336|Q9UBD5-3|ORC3	24.20275056022122	0.7724576178584145	5				NaN	NaN	0	NaN	4599	3534	8134
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8149	25.569	NaN	3387.6	30	0	771.89	0.143	+			27908	MTSTMTIGK	9	58	485.24029062300355	968.4660283128071	2	485.2405090332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MTSTMTIGK_	ENSG00000131781|ENST00000254090|FMO5	82.7504851949679	0.08565546331141553	5				NaN	NaN	0	NaN	4610	3537	8148
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8181	25.64	NaN	2813.9	30	0	885.22	0.214	+			42691	TCTAAHPEL	9	57	471.7207578979568	941.4269628627136	2	471.72119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TCTAAHPEL_	nc|ENSG00000211890|P01877-1|IGHA2;nc|ENSG00000211890|P01877|IGHA2	96.19043198914106	0.047412499214244314	5				NaN	NaN	0	NaN	4636	3543	8180
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8182	25.643	NaN	3215.9	30	0	1043.8	0.035			+	14054	GSIELGKAKV	10	30	334.53760444342294	1000.5909839304688	3	334.5374755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSIELGKAKV_	REV__AP2B1|p.N760Ifs*17|1|0.37|ENSG00000006125|chr17:35674314-35674314|A/-|frameshift_variant;REV__ENSG00000006125|ENST00000610402|AP2B1;REV__ENST00000441188.2_1_X:92477682-92478501:-|nuORF;REV__nc|ENSG00000006125|P63010-3|AP2B1;REV__nc|ENSG00000006125|P63010|AP2B1	30.503639358989545	0.6307262373768582	5				NaN	NaN	0	NaN	4637	3543	8180
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8200	25.68	NaN	10590	30	0	1007.1	0.214	+			47788	VSIEAGSAVGK	11	66	509.2821590086819	1016.5497650841638	2	509.2823791503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSIEAGSAVGK_	ENSG00000176945|ENST00000447234|MUC20;ENST00000457750.1_1_3:195341833-195346985:+|nuORF;nc|ENSG00000176945|Q8N307-3|MUC20	167.93327368760816	3.3692101381100775E-05	5				NaN	NaN	0	NaN	4652	3546	8199
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8201	25.684	NaN	2777.1	30	0	777.17	0.106	+			17438	IAVGKGSSL	9	47	416.2502260788347	830.4858992244694	2	416.25018310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IAVGKGSSL_	ENSG00000142871|ENST00000451137|CCN1	71.87747018426188	0.13267044672804276	5				NaN	NaN	0	NaN	4653	3546	8199
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8202	25.686	NaN	3294.3	30	0	408.61	0.106	+			43035	TEKVSKISL	9	65	502.80298832990314	1003.5914237266063	2	502.80279541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TEKVSKISL_	ENSG00000054523|ENST00000676179|KIF1B;ENSG00000130294|ENST00000498729|KIF1A;KIF1A|p.N1306Kfs*14|1|0.46|ENSG00000130294|chr2:240725306-240725307|-/T|frameshift_variant;KIF1A|p.R782Afs*30|1|0.33|ENSG00000130294|chr2:240760738-240760738|G/-|frameshift_variant;KIF1B|p.N365Mfs*8|1|0.32|ENSG00000054523|chr1:10278037-10278037|C/-|frameshift_variant;nc|ENSG00000054523|O60333-2|KIF1B;nc|ENSG00000054523|O60333-3|KIF1B;nc|ENSG00000054523|O60333-4|KIF1B;nc|ENSG00000130294|Q12756-2|KIF1A;nc|ENSG00000130294|Q12756|KIF1A	77.53327743719008	0.1082147015697554	5				NaN	NaN	0	NaN	4654	3546	8199
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8203	25.687	NaN	6165.7	30	0	2486.3	0.106	+			40441	STVNKWTLK	9	45	359.54131476186797	1075.602114885804	3	359.5417175292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STVNKWTLK_	ENSG00000114742|ENST00000302313|WDR48;nc|ENSG00000114742|Q8TAF3-3|WDR48;nc|ENSG00000114742|Q8TAF3-4|WDR48	35.15202426646627	0.4747332964206883	5				NaN	NaN	0	NaN	4655	3546	8199
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8204	25.689	NaN	1354.9	30	0	80.798	0.106	+			26329	LSWKAGTLA	9	56	473.7711486816406	NaN	0	473.7711486816406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSWKAGTLA_	ENST00000524249.5_1_2:46769237-46769306:-|nuORF	63.53385203322761	0.134247007536971	5				NaN	NaN	0	NaN	4656	3546	8199
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8205	25.691	NaN	2347.4	30	0	452.44	0.033			+	-1	AAGAAPMMQ	9	51	440.1879877463138	878.3614225594276	2	440.18878173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Oxidation (M)	_AAGAAPM(Oxidation (M))M(Oxidation (M))Q_	REV__ENSG00000124313|ENST00000642864|IQSEC2	35.200714571348534	0.47427825964483533	5				NaN	NaN	0	NaN	4657	3546	8199
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8206	25.692	NaN	1295.6	30	0	144.54	0.138	+			21480	KNISGLII	8	51	429.2762145996094	NaN	0	429.2762145996094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KNISGLII_	ENSG00000198105|ENST00000395867|ZNF248;ZNF248|p.R196Kfs*5|1|0.13|ENSG00000198105|chr10:37832768-37832769|-/T|frameshift_variant	44.116797842482775	1.7418937515398478	5				NaN	NaN	0	NaN	4658	3546	8199
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8224	25.731	NaN	19400	30	0	5696.6	0.214				-1	 	0	57	461.26601261127735	920.5174722893547	2	461.26611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4673	3549	8223
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8225	25.734	NaN	3152.3	30	0	384.29	0.106	+			19943	KEFMRQVL	8	68	525.7948217275534	NaN	0	525.7955322265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEFMRQVL_	DHX16|p.I1033*|5|0.32|ENSG00000204560|chr6:30653271-30653271|T/-|frameshift_variant;ENSG00000204560|ENST00000376442|DHX16	60.97194046774394	1.7418937515398478	5				NaN	NaN	0	NaN	4674	3549	8223
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8226	25.736	NaN	1329.9	30	0	158.61	0.106	+			1352	AEVDKVARL	9	49	500.7928445467826	NaN	0	500.7927551269531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEVDKVARL_	ENSG00000013523|ENST00000251089|ANGEL1	51.19269402634007	0.19847346126499396	5				NaN	NaN	0	NaN	4675	3549	8223
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8227	25.738	NaN	2148.9	30	0	704.96	0.106	+			48976	VVGGLAVGK	9	43	400.2551974748468	NaN	0	400.2552490234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVGGLAVGK_	ENSG00000103249|ENST00000382745|CLCN7;ENST00000563822.1_1_16:1505719-1509320:-|nuORF;ENST00000564968.1_1_16:1507514-1509320:-|nuORF;nc|ENSG00000103249|P51798-2|CLCN7;RBCK1-CLCN7|1|fusion;RBCK1-CLCN7|2|fusion	57.81127852772723	0.15865383123342353	5				NaN	NaN	0	NaN	4676	3549	8223
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8228	25.74	NaN	1853.1	30	0	699.23	0.036				-1	LVKMAASQTT	10	27	355.8586651175235	NaN	0	355.8587646484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_LVKM(Oxidation (M))AASQTT_	ENST00000390477.2_3_14:22934614-22934698:+|nuORF	31.634271133179894	0.39630454568332174	5				NaN	NaN	0	NaN	4677	3549	8223
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8246	25.777	NaN	2460	30	0	180.66	0.142	+			12154	GAIKVFVNK	9	51	488.30248841213665	974.5904238910733	2	488.302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GAIKVFVNK_	ENSG00000131725|ENST00000254029|WDR44;nc|ENSG00000131725|Q5JSH3-2|WDR44;nc|ENSG00000131725|Q5JSH3-4|WDR44;WDR44|p.F898L|1|0.26|ENSG00000131725|chrX:118448939-118448939|C/A|missense_variant	74.25504064058377	0.12238981753128622	5				NaN	NaN	0	NaN	4692	3552	8245
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8263	25.904	NaN	503.72	30	0	94.499	0.143			+	38337	SRKKSDRI	8	30	495.2940673828125	NaN	0	495.2940673828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SRKKSDRI_	REV__ENSG00000123575|ENST00000493442|FAM199X	31.529811441608018	1.7418937515398478	5				NaN	NaN	0	NaN	4706	3555	8262
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8281	25.943	NaN	24364	30	0	9150.9	0.214	+			14978	GTMTGMLYK	9	65	509.24023894393287	1016.4659249546658	2	509.2406005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_GTM(Oxidation (M))TGMLYK_	ENSG00000178440|ENST00000651763|TIMM23B-AGAP6;ENSG00000204152|ENST00000651259|TIMM23B;ENSG00000265354|ENST00000580018|TIMM23;nc|ENSG00000204152|Q5SRD1-2|TIMM23B	143.8867514904718	0.008656634767784652	5				NaN	NaN	0	NaN	4721	3558	8280
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8282	25.947	NaN	27986	30	0	14928	0.106	+			30622	QASDVSVKY	9	83	498.75312215943933	995.4916913856787	2	498.7532653808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QASDVSVKY_	ENSG00000047410|ENST00000367478|TPR;nc|ENSG00000047410|P12270-2|TPR;TPR|p.E1141Dfs*29|1|0.08|ENSG00000047410|chr1:186344085-186344086|-/CAGGTAAA|frameshift_variant;TPR|p.G216Rfs*3|1|0.34|ENSG00000047410|chr1:186362887-186362888|-/T|frameshift_variant;TPR|p.P2083Qfs*3|1|0.31|ENSG00000047410|chr1:186323735-186323735|G/-|frameshift_variant;TPR|p.T2133Lfs*63|1|0.03|ENSG00000047410|chr1:186322382-186322383|-/GTACTAATAAG|frameshift_variant;TPR|p.V1142Efs*26|1|0.08|ENSG00000047410|chr1:186344083-186344084|-/TT|frameshift_variant	90.60085204095205	0.06317133949006545	5				NaN	NaN	0	NaN	4722	3558	8280
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8283	25.949	NaN	8447.7	30	0	3880	0.106	+			14713	GTIKDIVTR	9	63	501.8007259524562	1001.5868989717125	2	501.800537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTIKDIVTR_	ENSG00000196305|ENST00000443024|IARS1;ENST00000490438.1_1_9:95050027-95055918:-|nuORF	91.26522074875469	0.06129826844580791	5				NaN	NaN	0	NaN	4723	3558	8280
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8284	25.95	NaN	2293	30	0	330.93	0.106	+			35339	SAPASQASL	9	47	416.2138029892974	830.4130530453948	2	416.21368408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SAPASQASL_	ENSG00000137497|ENST00000393695|NUMA1;ENST00000540626.5_1_11:71714575-71718510:-|nuORF;nc|ENSG00000137497|Q14980-2|NUMA1;nc|ENSG00000137497|Q14980-5|NUMA1	95.81516180277367	0.04847050768394289	5				NaN	NaN	0	NaN	4724	3558	8280
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8285	25.952	NaN	1502.9	30	0	529.96	0.106			+	18713	ITEVQLLVD	9	48	515.2953733895465	1028.576193845893	2	515.2962036132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ITEVQLLVD_	REV__DST|p.K5076Nfs*24|1|0.31|ENSG00000151914|chr6:56472218-56472218|T/-|frameshift_variant;REV__DST|p.T4428Nfs*23|1|0.12|ENSG00000151914|chr6:56497896-56497897|-/T|frameshift_variant;REV__ENSG00000151914|ENST00000680361|DST;REV__nc|ENSG00000151914|Q03001-14|DST;REV__nc|ENSG00000151914|Q03001-8|DST;REV__nc|ENSG00000151914|Q03001|DST	29.14955571784316	0.5308295550522326	5				NaN	NaN	0	NaN	4725	3558	8280
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8286	25.954	NaN	1606.6	30	0	194.57	0.036	+			33426	RIIEPLTSR	9	62	542.8266944405685	1083.638835947937	2	542.82763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RIIEPLTSR_	ENSG00000163918|ENST00000296273|RFC4;ENST00000479307.5_1_3:186508099-186512490:-|nuORF;ENST00000494047.5_1_3:186509405-186522502:-|nuORF;nc|ENSG00000163918|P35249-2|RFC4	59.93077597824379	0.21419174904018318	5				NaN	NaN	0	NaN	4726	3558	8280
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8287	25.955	NaN	2730.6	30	0	700.81	0.139	+			17035	HPVQHISF	8	50	482.75332299074546	963.4920930482909	2	482.75341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HPVQHISF_	ENSG00000174989|ENST00000652555|FBXW8;nc|ENSG00000174989|Q8N3Y1-2|FBXW8	73.97473282117947	0.3737790450121076	5				NaN	NaN	0	NaN	4727	3558	8280
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8305	25.994	NaN	12507	30	0	1373.3	0.214	+			4416	ATIEEAYSR	9	72	520.2559669851997	1038.4973810371994	2	520.256591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATIEEAYSR_	ENSG00000157107|ENST00000430046|FCHO2;nc|ENSG00000157107|Q0JRZ9-2|FCHO2;nc|ENSG00000157107|Q0JRZ9-3|FCHO2	155.5846463517096	0.005567437401040498	5				NaN	NaN	0	NaN	4742	3561	8304
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8306	25.997	NaN	3244.7	30	0	1049.4	0.106	+			23677	LASLLSPGSV	10	54	472.27645736271415	942.5383617922283	2	472.27593994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LASLLSPGSV_	ENSG00000116096|ENST00000234454|SPR;ENST00000498749.1_1_2:73114531-73115553:+|nuORF	40.77816245573522	0.5419747034533848	5				NaN	NaN	0	NaN	4743	3561	8304
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8307	25.999	NaN	2215.9	30	0	222.07	0.106			+	8894	EETKQLVS	8	53	467.24783430736863	NaN	0	467.2478332519531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EETKQLVS_	REV__ENSG00000127603|ENST00000564288|MACF1;REV__nc|ENSG00000127603|O94854|MACF1;REV__nc|ENSG00000127603|Q9UPN3-2|MACF1;REV__nc|ENSG00000127603|Q9UPN3-3|MACF1;REV__nc|ENSG00000127603|Q9UPN3-4|MACF1;REV__nc|ENSG00000127603|Q9UPN3-5|MACF1;REV__nc|ENSG00000127603|Q9UPN3|MACF1	79.71258880314673	1.7418937515398478	5				NaN	NaN	0	NaN	4744	3561	8304
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8308	26.001	NaN	906.3	30	0	150.09	0.106	+			17821	IEYAKPTRL	9	37	545.8159408377209	NaN	0	545.815673828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IEYAKPTRL_	ENSG00000104824|ENST00000221419|HNRNPL;HNRNPL|p.P337Hfs*58|9|0.35|ENSG00000104824|chr19:38840319-38840319|G/-|frameshift_variant;HNRNPL|p.P338Tfs*56|1|0.23|ENSG00000104824|chr19:38840318-38840319|-/G|frameshift_variant;nc|ENSG00000104824|P14866-2|HNRNPL	30.568863376406313	0.32323128698768616	5				NaN	NaN	0	NaN	4745	3561	8304
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8309	26.003	NaN	2029.8	30	0	508.98	0.035			+	7230	DALAKAVQY	9	59	489.7657472040047	977.5169414748094	2	490.2419128417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DALAKAVQY_	REV__ENSG00000205560|ENST00000312108|CPT1B;REV__nc|ENSG00000205560|Q92523-2|CPT1B;REV__nc|ENSG00000205560|Q92523-3|CPT1B;REV__nc|ENSG00000205560|Q92523-4|CPT1B	60.97194046774394	0.20551255781574032	5				NaN	NaN	0	NaN	4746	3561	8304
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8327	26.04	NaN	2173.7	30	0	463.24	0.142			+	47603	VRSTIVTH	8	48	456.7662912734994	911.5180296137988	2	456.7659606933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VRSTIVTH_	REV__CON__Q3T052	40.5726180659479	0.6527593143185008	5				NaN	NaN	0	NaN	4761	3564	8326
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8345	26.079	NaN	12414	30	0	2127.1	0.214	+			48503	VTNDGATILK	10	70	516.2901302932039	1030.5657076532077	2	516.291259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTNDGATILK_	ENSG00000166226|ENST00000299300|CCT2;ENST00000546859.5_1_12:69979244-69981900:+|nuORF;ENST00000550455.5_1_12:69979244-69981425:+|nuORF;ENST00000550638.5_1_12:69979244-69982049:+|nuORF;ENST00000551620.5_1_12:69979244-69983508:+|nuORF;nc|ENSG00000166226|P78371-2|CCT2	201.61192446435922	3.4460847431379217E-06	5				NaN	NaN	0	NaN	4776	3567	8344
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8346	26.083	NaN	8077	30	0	1491.5	0.034	+			39181	SSYPVCVSK	9	56	485.2387323812769	968.4629118293539	2	485.23956298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSYPVCVSK_	ENSG00000089127|ENST00000202917|OAS1;ENST00000549820.1_1_12:113344820-113354315:+|nuORF;nc|ENSG00000089127|P00973-2|OAS1;nc|ENSG00000089127|P00973-3|OAS1;nc|ENSG00000089127|P00973-4|OAS1;OAS1|p.N280Tfs*8|1|0.07|ENSG00000089127|chr12:112916689-112916689|A/-|frameshift_variant	99.01295224348159	0.040209060045561164	5				NaN	NaN	0	NaN	4777	3567	8344
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8364	26.119	NaN	1434.8	30	0	157.93	0.215	+			18773	ITQEMQTLK	9	51	546.2909261750084	1090.5672994168167	2	546.2926025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ITQEMQTLK_	ENSG00000104133|ENST00000261866|SPG11;nc|ENSG00000104133|Q96JI7-2|SPG11;nc|ENSG00000104133|Q96JI7-3|SPG11	72.2432373244024	0.13108886737667413	5				NaN	NaN	0	NaN	4792	3570	8363
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8365	26.123	NaN	1718.8	30	0	580.56	0.039				-1	STCQIWINMGP	11	32	422.5266575253969	1264.5581431763908	3	422.5267333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_STCQIWINM(Oxidation (M))GP_	DYNC1H1|p.F2635Lfs*67|1|0.16|ENSG00000197102|chr14:102017141-102017141|T/-|frameshift_variant	26.063383197487333	0.7164075632144343	5				NaN	NaN	0	NaN	4793	3570	8363
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8383	26.16	NaN	13864	30	0	2809.4	0.214			+	42050	SWRGFGVESL	10	65	379.86099726780833	1136.561162403625	3	379.86102294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SWRGFGVESL_	REV__ENSG00000248713|ENST00000511828|C4orf54	31.529811441608018	0.6223461015008678	5				NaN	NaN	0	NaN	4808	3573	8382
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8384	26.164	NaN	13337	30	0	7398.9	0.106			+	-1	CHPRNSCSVTN	11	56	444.5244748330548	1330.5515950993645	3	444.5248107910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))HPRNSC(Carbamidomethyl (C))SVTN_	REV__ENSG00000145777|ENST00000344895|TSLP	26.749707702089633	0.7092085788826945	5				NaN	NaN	0	NaN	4809	3573	8382
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8385	26.166	NaN	1196.6	30	0	200.77	0.106				-1	LSVHRCTH	8	52	505.25127069466737	1008.4879884561348	2	505.250732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LSVHRC(Carbamidomethyl (C))TH_	ENST00000397086.6_2_16:2303376-2303433:-|nuORF	35.61828744233558	0.6843154725607303	5				NaN	NaN	0	NaN	4810	3573	8382
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8386	26.167	NaN	1727.2	30	0	210.24	0.106	+			30260	PTASTKGSR	9	49	452.7475316203234	903.4805103074468	2	453.2498779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PTASTKGSR_	nc|ENSG00000284862|Q9UFE4|CCDC39	29.170058357718403	0.5306379469863586	5				NaN	NaN	0	NaN	4811	3573	8382
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8387	26.169	NaN	809.63	30	0	105.59	0.034			+	32066	QSAFLADKA	9	41	475.75213623046875	NaN	0	475.75213623046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QSAFLADKA_	REV__ENSG00000162735|ENST00000368072|PEX19;REV__ENST00000524939.1_1_1:160252194-160254914:-|nuORF;REV__ENST00000532508.5_1_1:160249625-160254863:-|nuORF	31.634271133179894	0.31785226469614103	5				NaN	NaN	0	NaN	4812	3573	8382
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8401	26.198	NaN	8532.9	30	0	1543.7	0.214	+			2467	APLKSKMIY	9	64	525.8041802082256	1049.593807483251	2	525.8058471679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_APLKSKMIY_	ENSG00000125868|ENST00000246069|DSTN;ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65623104-65623215:-|nuORF;ENST00000602547.1_1_12:6994092-6994545:+|nuORF;nc|ENSG00000125868|P60981-2|DSTN;nc|ENSG00000165410|Q9Y281-3|CFL2	101.60071028292904	0.0375685401170269	5				NaN	NaN	0	NaN	4823	3576	8400
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8402	26.202	NaN	2234.2	30	0	229.57	0.106	+			35581	SAYGSVKAY	9	56	473.2373013465247	944.4600497598494	2	473.2374267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAYGSVKAY_	ENSG00000182718|ENST00000451270|ANXA2;ENST00000557937.5_1_15:60655071-60678274:-|nuORF;nc|ENSG00000182718|P07355-2|ANXA2;nc|ENSG00000231991|A6NMY6|ANXA2P2;NPTN-ANXA2|1|fusion	75.04331003522576	0.118981335847003	5				NaN	NaN	0	NaN	4824	3576	8400
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8403	26.204	NaN	1710.8	30	0	114.15	0.106	+			45585	TYNQKHSLF	9	58	569.2886692371804	NaN	0	569.2892456054688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TYNQKHSLF_	ENSG00000165175|ENST00000614558|MID1IP1	44.377184641726394	0.24544280798894275	5				NaN	NaN	0	NaN	4825	3576	8400
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8404	26.206	NaN	4268.4	30	0	819.71	0.034	+			41450	SVNLTAPQGA	10	53	479.2534117794029	956.4922706256058	2	479.2538757324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVNLTAPQGA_	ENST00000374165.5_1_9:116172982-116173105:+|nuORF	63.53385203322761	0.33370026130094593	5				NaN	NaN	0	NaN	4826	3576	8400
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8422	26.243	NaN	4082.2	30	0	1385.6	0.214	+			4330	ATGLSGLTK	9	50	424.24769620470096	846.4808394762019	2	424.2476806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATGLSGLTK_	ENSG00000165949|ENST00000612813|IFI27;nc|ENSG00000165949|P40305-1|IFI27;nc|ENSG00000165949|P40305-3|IFI27;nc|ENSG00000165949|P40305-4|IFI27	63.53385203322761	0.18415635464017938	5				NaN	NaN	0	NaN	4841	3579	8421
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8423	26.247	NaN	1865.2	30	0	484.67	0.106	+			5499	AVADSVLTK	9	61	452.2604110932402	902.5062692532804	2	452.2604064941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVADSVLTK_	ENSG00000173821|ENST00000582970|RNF213;ENST00000559070.5_1_17:78261823-78310301:+|nuORF;nc|ENSG00000173821|Q63HN8-4|RNF213;nc|ENSG00000173821|Q63HN8|RNF213;RNF213|p.C5022Lfs*7|1|0.3|ENSG00000173821|chr17:80389237-80389237|G/-|frameshift_variant;RNF213|p.P2167Lfs*64|1|0.09|ENSG00000173821|chr17:80344834-80344835|-/T|frameshift_variant;RNF213|p.Q1953Rfs*50|2|0.13|ENSG00000173821|chr17:80340219-80340219|C/-|frameshift_variant	60.11826168202944	0.21262886028301267	5				NaN	NaN	0	NaN	4842	3579	8421
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8424	26.249	NaN	2494.3	30	0	760.11	0.035			+	-1	KLSDGMKTM	9	41	513.7497273938707	1025.4849018545412	2	513.7498779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_KLSDGMKTM(Oxidation (M))_	REV__ENST00000532378.5_1_11:14901840-14912470:-|nuORF	31.529811441608018	0.5085848003137583	5				NaN	NaN	0	NaN	4843	3579	8421
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8442	26.286	NaN	1241.6	30	0	397.72	0.215	+			3593	ASVKAIFSK	9	51	475.7870732486987	949.5595935641974	2	475.78662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASVKAIFSK_	ENSG00000083642|ENST00000315596|PDS5B;nc|ENSG00000083642|Q9NTI5-2|PDS5B;PDS5B|p.G721Dfs*35|1|0.13|ENSG00000083642|chr13:32732132-32732132|A/-|frameshift_variant;PDS5B|p.K1268Rfs*8|1|0.07|ENSG00000083642|chr13:32770296-32770296|A/-|frameshift_variant;PDS5B|p.K1287Rfs*22|1|0.26|ENSG00000083642|chr13:32770351-32770351|A/-|frameshift_variant;PDS5B|p.K693Qfs*8|1|0.11|ENSG00000083642|chr13:32710054-32710055|-/T|frameshift_variant;PDS5B|p.N1390Cfs*12|1|0.44|ENSG00000083642|chr13:32770750-32770751|AA/-|frameshift_variant;PDS5B|p.S1198Vfs*10|1|0.28|ENSG00000083642|chr13:32764556-32764556|A/-|frameshift_variant	58.2462437865262	0.22823408064396822	5				NaN	NaN	0	NaN	4858	3582	8441
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8443	26.29	NaN	2040.8	30	0	598.6	0.106	+			14979	GTMTGMLYK	9	55	509.24023894393287	1016.4659249546658	2	509.2408752441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_GTM(Oxidation (M))TGMLYK_	ENSG00000178440|ENST00000651763|TIMM23B-AGAP6;ENSG00000204152|ENST00000651259|TIMM23B;ENSG00000265354|ENST00000580018|TIMM23;nc|ENSG00000204152|Q5SRD1-2|TIMM23B	64.20726635412375	0.17854274437659667	5				NaN	NaN	0	NaN	4859	3582	8441
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8444	26.292	NaN	1281.4	30	0	194.25	0.035			+	25396	LPIYSAMTI	9	53	504.77660097284564	1007.5386490124913	2	504.77667236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LPIYSAMTI_	REV__ENSG00000165996|ENST00000361271|HACD1	33.51558372728122	0.4900267029546261	5				NaN	NaN	0	NaN	4860	3582	8441
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8462	26.329	NaN	5173	30	0	739.11	0.214	+			22737	KVAVVLIQK	9	62	499.34256940241204	996.6705858716241	2	499.34246826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVAVVLIQK_	ENSG00000168538|ENST00000334690|TRAPPC11;ENST00000509857.5_1_4:184585182-184595983:+|nuORF;nc|ENSG00000168538|Q7Z392-3|TRAPPC11;nc|ENSG00000168538|Q7Z392-4|TRAPPC11;TRAPPC11|p.T366Pfs*9|1|0.25|ENSG00000168538|chr4:183680246-183680246|A/-|frameshift_variant	145.15565482312357	0.00806134135205793	5				NaN	NaN	0	NaN	4875	3585	8461
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8463	26.333	NaN	3788.3	30	0	801.51	0.106	+			35087	SAFSTSISK	9	49	464.2430906921449	926.4716284510898	2	464.2430114746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAFSTSISK_	ENSG00000179115|ENST00000314606|FARSA;ENST00000592662.5_1_19:13039347-13044510:-|nuORF	46.45678178249821	0.34452392205506005	5				NaN	NaN	0	NaN	4876	3585	8461
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8464	26.335	NaN	3491	30	0	1375.9	0.106	+			2007	AKKYQLTNAF	10	42	395.2207344559193	1182.6403739679579	3	395.2209167480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AKKYQLTNAF_	ENSG00000102910|ENST00000285737|LONP2;nc|ENSG00000102910|Q86WA8-2|LONP2	26.063383197487333	0.6669871633831898	5				NaN	NaN	0	NaN	4877	3585	8461
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8465	26.337	NaN	2907.9	30	0	453.15	0.106	+			678	AEAKEKIYL	9	67	532.8030699811097	1063.5915870290194	2	532.8043212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEAKEKIYL_	ENSG00000133706|ENST00000394434|LARS1;ENST00000508667.5_1_5:145522961-145531505:-|nuORF;nc|ENSG00000133706|Q9P2J5-2|LARS1	77.31757898189308	0.1091473830098891	5				NaN	NaN	0	NaN	4878	3585	8461
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8466	26.339	NaN	3262.1	30	0	1348.9	0.106	+			31050	QEVVDGKVV	9	51	486.7718846530654	971.5292163729308	2	486.77154541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QEVVDGKVV_	CON__P35900;ENSG00000171431|ENST00000167588|KRT20;KRT20|p.V404M|1|0.22|ENSG00000171431|chr17:40876426-40876426|C/T|missense_variant	104.0567914643314	0.03506238181059741	5				NaN	NaN	0	NaN	4879	3585	8461
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8467	26.34	NaN	2208.7	30	0	557.97	0.033	+			40597	SVAGLSVTK	9	48	431.2560364581245	860.4975199830491	2	431.256103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVAGLSVTK_	ENSG00000197841|ENST00000492450|ZNF181;ZNF181|p.K248Sfs*36|1|0.29|ENSG00000197841|chr19:34741122-34741125|CAAA/-|frameshift_variant;ZNF181|p.V107Lfs*2|1|0.15|ENSG00000197841|chr19:34740695-34740695|A/-|frameshift_variant;ZNF181|p.Y52H|1|0.07|ENSG00000197841|chr19:34739546-34739546|T/C|missense_variant	37.81151784470057	0.4459294069877048	5				NaN	NaN	0	NaN	4880	3585	8461
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8468	26.341	NaN	2614.8	30	0	398.66	0.14			+	-1	LAFCFRLL	8	59	520.2930224292072	1038.5714919252143	2	520.2938842773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_LAFC(Carbamidomethyl (C))FRLL_	REV__ENST00000264235.12_2_3:119544961-119545087:-|nuORF	54.76467175910256	0.5536104764165384	5				NaN	NaN	0	NaN	4881	3585	8461
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8486	26.38	NaN	2929.9	30	0	551.83	0.214	+			33182	REVEARYAL	9	63	553.8020619304667	NaN	0	553.8023071289062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_REVEARYAL_	ENSG00000111057|ENST00000388835|KRT18;ENST00000411618.1_1_9:30799684-30799825:-|nuORF;ENST00000549078.5_1_12:53344429-53346127:+|nuORF	35.15202426646627	0.3000918603816441	5				NaN	NaN	0	NaN	4896	3588	8485
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8487	26.384	NaN	1578.4	30	0	488.12	0.106	+			4219	ATGDALLEK	9	53	459.2504375196254	916.4863221060508	2	459.2504577636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATGDALLEK_	ENSG00000108679|ENST00000262776|LGALS3BP;ENST00000586720.5_1_17:76967660-76975958:-|nuORF;ENST00000587251.5_1_17:76967660-76972124:-|nuORF	70.8162118820467	0.13725933411854815	5				NaN	NaN	0	NaN	4897	3588	8485
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8488	26.386	NaN	1520.9	30	0	278.3	0.033	+			40598	SVAGLSVTK	9	47	431.25616455078125	NaN	0	431.25616455078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVAGLSVTK_	ENSG00000197841|ENST00000492450|ZNF181;ZNF181|p.K248Sfs*36|1|0.29|ENSG00000197841|chr19:34741122-34741125|CAAA/-|frameshift_variant;ZNF181|p.V107Lfs*2|1|0.15|ENSG00000197841|chr19:34740695-34740695|A/-|frameshift_variant;ZNF181|p.Y52H|1|0.07|ENSG00000197841|chr19:34739546-34739546|T/C|missense_variant	64.20726635412375	0.13137488984569443	5				NaN	NaN	0	NaN	4898	3588	8485
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8506	26.423	NaN	3987.6	30	0	1483.6	0.214	+			40184	STQTALTLK	9	51	481.7796114735916	961.5446700139833	2	481.7797546386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STQTALTLK_	ENSG00000172123|ENST00000304905|SLFN12;SLFN12|p.V491Cfs*4|1|0.28|ENSG00000172123|chr17:35411605-35411605|T/-|frameshift_variant	83.6470233535746	0.08277643980271215	5				NaN	NaN	0	NaN	4913	3591	8505
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8507	26.427	NaN	4794.2	30	0	1261.6	0.106			+	18727	ITGTGNQIV	9	64	451.7508072139709	901.4870614947419	2	451.7512512207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ITGTGNQIV_	REV__ENSG00000156453|ENST00000287008|PCDH1;REV__ENST00000511044.1_1_5:141242715-141245657:-|nuORF;REV__nc|ENSG00000156453|Q08174|PCDH1	49.44154591367651	0.3095138337212152	5				NaN	NaN	0	NaN	4914	3591	8505
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8508	26.429	NaN	1328.3	30	0	204.34	0.037	+			24691	LHAWEISWP	9	42	569.788818359375	NaN	0	569.788818359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LHAWEISWP_	ENSG00000111671|ENST00000524270|SPSB2;nc|ENSG00000111671|Q99619-2|SPSB2	24.20275056022122	0.35506675290109213	5				NaN	NaN	0	NaN	4915	3591	8505
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8526	26.466	NaN	1664.5	30	0	152.09	0.144				-1	AIKKMAMSHG	10	49	545.2824710434378	1088.5503891536755	2	545.2835693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_AIKKMAM(Oxidation (M))SHG_	ADCY10|p.N1597Tfs*4|1|0.07|ENSG00000143199|chr1:167809721-167809721|T/-|frameshift_variant;ADCY10|p.P1022Sfs*2|1|0.28|ENSG00000143199|chr1:167837262-167837263|-/A|frameshift_variant;ENSG00000143199|ENST00000367851|ADCY10;nc|ENSG00000143199|Q96PN6-2|ADCY10;nc|ENSG00000143199|Q96PN6-4|ADCY10	34.172542307311794	0.6007644933930345	5				NaN	NaN	0	NaN	4930	3594	8525
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8544	26.505	NaN	5018.6	30	0	2414.4	0.214	+			25641	LQSLKVDTQ	9	63	516.2904101339914	1030.5662673347827	2	516.2910766601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LQSLKVDTQ_	ENSG00000155066|ENST00000317620|PROM2;ENST00000487138.5_1_2:95944617-95954741:+|nuORF;nc|ENSG00000155066|Q8N271-3|PROM2	90.36981228632155	0.0638227155548745	5				NaN	NaN	0	NaN	4945	3597	8543
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8545	26.509	NaN	1479.2	30	0	392.65	0.106	+			2716	AQSTFTLAI	9	47	476.2630153203541	950.5114777075082	2	476.2637023925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AQSTFTLAI_	C5|p.W1228Gfs*21|1|0.25|ENSG00000106804|chr9:120976882-120976882|A/-|frameshift_variant;ENSG00000106804|ENST00000223642|C5	44.116797842482775	0.37197099687881774	5				NaN	NaN	0	NaN	4946	3597	8543
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8546	26.511	NaN	1146.5	30	0	269.96	0.106			+	47736	VSGIGDEPVL	10	48	493.26416749687337	NaN	0	493.2642517089844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSGIGDEPVL_	REV__ENSG00000239282|ENST00000407689|CASTOR1;REV__ENST00000330168.9_3_22:30681611-30688778:-|nuORF;REV__ENST00000418047.5_3_22:30681611-30682125:-|nuORF;REV__ENST00000434987.5_3_22:30681611-30689737:-|nuORF;REV__ENST00000447976.1_3_22:30681611-30689721:-|nuORF	34.172542307311794	0.38797011891751465	5				NaN	NaN	0	NaN	4947	3597	8543
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8547	26.513	NaN	1050.2	30	0	148.08	0.035	+			38936	SSQNFTLTK	9	44	513.26722007109	NaN	0	513.2669677734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSQNFTLTK_	CCNJL|p.V393Rfs*8|1|0.23|ENSG00000135083|chr5:160253509-160253510|-/G|frameshift_variant;ENSG00000135083|ENST00000257536|CCNJL;ENST00000377503.6_1_5:159681329-159707642:-|nuORF;nc|ENSG00000135083|Q8IV13|CCNJL	33.921630207806714	0.3063038642147651	5				NaN	NaN	0	NaN	4948	3597	8543
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8565	26.549	NaN	4191.4	30	0	1271.7	0.214	+			5033	ATSEIFASK	9	55	477.2508123785527	952.4870718239055	2	477.2507019042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSEIFASK_	ENSG00000005810|ENST00000544440|MYCBP2;MYCBP2|p.C1064Ifs*31|1|0.09|ENSG00000005810|chr13:77211267-77211279|TTATCAGAAGGCA/-|frameshift_variant;MYCBP2|p.N1867Tfs*9|1|0.15|ENSG00000005810|chr13:77171572-77171572|T/-|frameshift_variant;MYCBP2|p.N3049*|1|0.11|ENSG00000005810|chr13:77097894-77097895|TT/-|frameshift_variant;MYCBP2|p.P4047Qfs*26|2|0.35|ENSG00000005810|chr13:77067782-77067782|G/-|frameshift_variant;MYCBP2|p.T1507Ffs*24|1|0.04|ENSG00000005810|chr13:77185189-77185190|-/TTGTAAA|frameshift_variant;MYCBP2|p.T4311Pfs*37|1|0.14|ENSG00000005810|chr13:77059619-77059619|G/-|frameshift_variant;MYCBP2|p.V3749*|1|0.12|ENSG00000005810|chr13:77081486-77081486|C/-|frameshift_variant;nc|ENSG00000005810|O75592-2|MYCBP2	112.10723106719422	0.02684780151337622	5				NaN	NaN	0	NaN	4963	3600	8564
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8566	26.553	NaN	5447.4	30	0	661.58	0.106	+			42373	TAINASRAL	9	57	458.7643108843122	915.5140688354244	2	458.76422119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAINASRAL_	ENSG00000174373|ENST00000680220|RALGAPA1;ENST00000443361.1_1_9:108287470-108288637:+|nuORF;nc|ENSG00000174373|Q6GYQ0-2|RALGAPA1;nc|ENSG00000174373|Q6GYQ0-5|RALGAPA1;nc|ENSG00000174373|Q6GYQ0-6|RALGAPA1;nc|ENSG00000174373|Q6GYQ0-7|RALGAPA1;nc|ENSG00000174373|Q6GYQ0|RALGAPA1	72.2432373244024	0.13108886737667413	5				NaN	NaN	0	NaN	4964	3600	8564
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8567	26.555	NaN	2368.4	30	0	398.09	0.037			+	-1	MVNTGFVWF	9	37	372.845587862266	NaN	0	372.8457336425781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))VNTGFVWF_	REV__ENSG00000101294|ENST00000398174|HM13;REV__ENST00000460389.5_1_20:30136650-30157019:+|nuORF;REV__ENST00000464173.5_1_20:30136866-30137929:+|nuORF;REV__ENST00000472128.5_1_20:30136905-30155443:+|nuORF;REV__ENST00000483310.5_1_20:30136863-30150236:+|nuORF;REV__ENST00000492709.5_1_20:30132820-30157019:+|nuORF;REV__nc|ENSG00000101294|Q8TCT9-4|HM13;REV__nc|ENSG00000101294|Q8TCT9|HM13	23.52269567125451	0.3573684076213556	5				NaN	NaN	0	NaN	4965	3600	8564
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8585	26.592	NaN	11718	30	0	1158.5	0.214				-1	 	0	67	483.76596798861675	965.5173830440335	2	483.7667541503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4980	3603	8584
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8586	26.596	NaN	3047.5	30	0	261.4	0.106	+			8114	DYMKTTSNF	9	63	561.7419567040416	1121.4693604748832	2	561.7435913085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_DYM(Oxidation (M))KTTSNF_	ENSG00000165525|ENST00000298310|NEMF;nc|ENSG00000165525|O60524-3|NEMF;nc|ENSG00000165525|O60524-4|NEMF;NEMF|p.K641Rfs*9|1|0.15|ENSG00000165525|chr14:49802721-49802721|T/-|frameshift_variant;NEMF|p.M879*|1|0.12|ENSG00000165525|chr14:49789558-49789558|T/-|frameshift_variant;NEMF|p.M879Nfs*10|1|0.13|ENSG00000165525|chr14:49789557-49789558|-/T|frameshift_variant	106.68306549817024	0.032382560583716295	5				NaN	NaN	0	NaN	4981	3603	8584
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8587	26.598	NaN	1338.6	30	0	458.12	0.033			+	25464	LPQPVSHA	8	41	424.73472771782957	847.4549025024592	2	424.73486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LPQPVSHA_	REV__USH2A|p.A4144V|1|0.5|ENSG00000042781|chr1:215675480-215675480|G/A|missense_variant	42.47446043378293	0.6409579893742323	5				NaN	NaN	0	NaN	4982	3603	8584
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8605	26.635	NaN	6336.1	30	0	1072.7	0.214	+			41696	SVSDLAPPR	9	56	471.2558397594488	940.4971265856976	2	471.2558898925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSDLAPPR_	ENSG00000166295|ENST00000299381|ANAPC16	54.776311868738084	0.25715957988447635	5				NaN	NaN	0	NaN	4997	3606	8604
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8606	26.639	NaN	1115.3	30	0	191.12	0.106			+	7355	DDAGLHVSI	9	43	463.732083053566	925.449613173932	2	463.7319641113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DDAGLHVSI_	REV__sp|F5HE12|UL35_HCMVMTegumentproteinUL35OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL35PE=3SV=1;REV__sp|P16766|UL35_HCMVAProteinUL35OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL35PE=1SV=1	38.80614096846853	0.43426287593479557	5				NaN	NaN	0	NaN	4998	3606	8604
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8607	26.641	NaN	1548.1	30	0	149.57	0.106	+			41343	SVLVKGKDQ	9	48	487.28623393136075	972.5579149295215	2	487.28662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVLVKGKDQ_	ENST00000609796.1_1_20:1460117-1472086:-|nuORF	56.43379154798735	0.2433427591689151	5				NaN	NaN	0	NaN	4999	3606	8604
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8608	26.642	NaN	6669	30	0	3212.8	0.037			+	43688	TKGRASPLVCA	11	45	368.20584820122895	1101.5957152038868	3	368.2063293457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TKGRASPLVCA_	REV__ENST00000379789.8_1_10:6274912-6275263:+|nuORF	32.03412808689991	0.6537793186749145	5				NaN	NaN	0	NaN	5000	3606	8604
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8626	26.68	NaN	49567	30	0	17497	0.214	+			15140	GTSEFITGK	9	74	470.242579161888	938.470605390576	2	470.2423095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTSEFITGK_	ENSG00000110002|ENST00000456829|VWA5A;VWA5A|p.D571Mfs*3|1|0.56|ENSG00000110002|chr11:124137094-124137094|A/-|frameshift_variant	180.86945649972546	0.001208757763874378	5				NaN	NaN	0	NaN	5015	3609	8625
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8627	26.683	NaN	2398.4	30	0	290.33	0.106	+			23889	LDISYKSNH	9	63	538.7732777732408	1075.5320026132815	2	538.7737426757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LDISYKSNH_	L1MB8_dup3477|chr3:193839654-193840532:-|1.6485885596924217|0.3003449133866926|2.46|479.0|49|3|anti-sense	29.14955571784316	0.5308295550522326	5				NaN	NaN	0	NaN	5016	3609	8625
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8628	26.686	NaN	3770.8	30	0	716.8	0.106	+			13070	GFGVHPKNIF	10	36	372.5388098565656	NaN	0	372.5391540527344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GFGVHPKNIF_	ENSG00000184611|ENST00000332142|KCNH7;KCNH7|p.D991Kfs*12|1|0.24|ENSG00000184611|chr2:162380007-162380014|GCATGTCA/-|frameshift_variant;KCNH7|p.N805Mfs*21|1|0.44|ENSG00000184611|chr2:162396939-162396939|T/-|frameshift_variant;nc|ENSG00000184611|Q9NS40-2|KCNH7	18.262085536374414	0.4201028297492154	5				NaN	NaN	0	NaN	5017	3609	8625
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8629	26.687	NaN	2509.5	30	0	1170	0.106	+			28523	NIEFITAGG	9	51	461.2369991589406	920.4594453846812	2	461.23724365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NIEFITAGG_	ENSG00000145555|ENST00000513610|MYO10;MYO10|p.G1223Rfs*28|1|0.25|ENSG00000145555|chr5:16694504-16694505|-/T|frameshift_variant;MYO10|p.I417Tfs*39|1|0.05|ENSG00000145555|chr5:16764326-16764327|-/ACAAATCTCTG|frameshift_variant;MYO10|p.N507Qfs*30|1|0.11|ENSG00000145555|chr5:16762613-16762614|-/TG|frameshift_variant;MYO10|p.S468Ffs*8|1|0.05|ENSG00000145555|chr5:16763679-16763680|-/A|frameshift_variant	52.936696900407355	0.27249468807391813	5				NaN	NaN	0	NaN	5018	3609	8625
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8630	26.689	NaN	1358.9	30	0	125.02	0.106				-1	YPGCTKVY	8	45	494.2335931567753	986.4526333803507	2	494.2342529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_YPGC(Carbamidomethyl (C))TKVY_	ENSG00000102554|ENST00000377687|KLF5;nc|ENSG00000102554|Q13887-2|KLF5;nc|ENSG00000102554|Q13887-4|KLF5	60.97194046774394	0.49215940876911696	5				NaN	NaN	0	NaN	5019	3609	8625
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8631	26.691	NaN	768.75	30	0	78.046	0.037	+			29369	PAGNRGARKAS	11	33	362.2022399902344	NaN	0	362.2022399902344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PAGNRGARKAS_	ENSG00000173200|ENST00000464300|PARP15;PARP15|p.F199Hfs*7|1|0.16|ENSG00000173200|chr3:122613089-122613092|TCTT/-|frameshift_variant	22.561587123415745	0.456735970842152	5				NaN	NaN	0	NaN	5020	3609	8625
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8632	26.692	NaN	1218.7	30	0	120.34	0.138	+			35950	SEGPKVVSV	9	52	451.25238037109375	NaN	0	451.25238037109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SEGPKVVSV_	ENSG00000143373|ENST00000336715|ZNF687;nc|ENSG00000143373|Q8N1G0-2|ZNF687;ZNF687|p.A639Pfs*74|1|0.27|ENSG00000143373|chr1:151288202-151288202|G/-|frameshift_variant;ZNF687|p.H733Mfs*30|1|0.58|ENSG00000143373|chr1:151288603-151288603|C/-|frameshift_variant;ZNF687|p.P960Lfs*23|1|0.3|ENSG00000143373|chr1:151289915-151289915|G/-|frameshift_variant;ZNF687|p.R871Gfs*29|1|0.1|ENSG00000143373|chr1:151289512-151289512|A/-|frameshift_variant;ZNF687|p.R939Vfs*10|1|0.08|ENSG00000143373|chr1:151289852-151289852|C/-|frameshift_variant	36.446750945000026	0.29355505452396785	5				NaN	NaN	0	NaN	5021	3609	8625
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8650	26.731	NaN	2574.3	30	0	639.15	0.214			+	-1	FGMELVLHL	9	61	537.7879283508911	1073.561303768582	2	537.7890014648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_FGM(Oxidation (M))ELVLHL_	REV__DDX51|p.Q584Pfs*40|1|0.19|ENSG00000185163|chr12:132140122-132140123|-/G|frameshift_variant;REV__ENSG00000185163|ENST00000397333|DDX51	47.91560031466742	0.327412564698279	5				NaN	NaN	0	NaN	5036	3612	8649
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8651	26.735	NaN	2591	30	0	944.38	0.106	+			14199	GSSASLVLK	9	50	431.2552041007497	860.4958552682995	2	431.2557067871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSSASLVLK_	ENSG00000075415|ENST00000552981|SLC25A3;ENST00000546766.5_1_12:98989476-98995303:+|nuORF;ENST00000547869.1_1_12:98994914-98995303:+|nuORF;ENST00000551123.5_1_12:98989412-98995303:+|nuORF;nc|ENSG00000075415|Q00325|SLC25A3	45.97224482568171	0.3502073465782774	5				NaN	NaN	0	NaN	5037	3612	8649
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8652	26.736	NaN	1262.1	30	0	151.54	0.034	+			47742	VSGKTTQIP	9	48	465.7666009037677	929.5186488743354	2	465.76593017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSGKTTQIP_	DHX16|p.G425V|1|0.08|ENSG00000204560|chr6:30664844-30664844|C/A|missense_variant	37.15910966729921	0.4535818937225704	5				NaN	NaN	0	NaN	5038	3612	8649
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8670	26.774	NaN	7889.2	30	0	3724.6	0.214			+	-1	RNWDLCRQ	8	43	383.1843330396365	NaN	0	383.18450927734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_RNWDLC(Carbamidomethyl (C))RQ_	REV__ENSG00000117115|ENST00000375486|PADI2;REV__ENST00000479534.5_1_1:17395541-17401618:-|nuORF	29.14955571784316	1.7418937515398478	5				NaN	NaN	0	NaN	5053	3615	8669
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8671	26.778	NaN	906.5	30	0	199.35	0.035			+	-1	ASVFFCSLS	9	44	509.24023894393287	1016.4659249546658	2	509.241455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_ASVFFC(Carbamidomethyl (C))SLS_	REV__ENSG00000197386|ENST00000355072|HTT	30.503639358989545	0.5181749237905803	5				NaN	NaN	0	NaN	5054	3615	8669
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8689	26.815	NaN	28043	30	0	15080	0.214	+			32356	QTYVGITEK	9	68	519.776521729227	1037.538490525254	2	519.7769775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QTYVGITEK_	ENSG00000144028|ENST00000323853|SNRNP200	138.06239232086	0.011389075116295402	5				NaN	NaN	0	NaN	5069	3618	8688
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8690	26.818	NaN	2956.3	30	0	417.5	0.106	+			27530	MPADTNKAF	9	64	497.736976037116	993.459399141032	2	497.73638916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MPADTNKAF_	ENSG00000125037|ENST00000245046|EMC3;ENST00000487465.5_1_3:10011273-10028351:-|nuORF;nc|ENSG00000125037|Q9P0I2-2|EMC3	77.31757898189308	0.1091473830098891	5				NaN	NaN	0	NaN	5070	3618	8688
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8691	26.82	NaN	1530.1	30	0	252.28	0.106	+			5628	AVCYQAITK	9	52	527.2744673121084	NaN	0	527.2742919921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_AVC(Carbamidomethyl (C))YQAITK_	ENSG00000140632|ENST00000321919|GLYR1;nc|ENSG00000140632|Q49A26-3|GLYR1;nc|ENSG00000140632|Q49A26-4|GLYR1;nc|ENSG00000140632|Q49A26-5|GLYR1	47.95952297671804	0.22075498469600283	5				NaN	NaN	0	NaN	5071	3618	8688
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8692	26.822	NaN	4301.9	30	0	671.2	0.106			+	31891	QQELALAQQ	9	65	514.7723356160949	1027.5301182989897	2	514.7720947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QQELALAQQ_	REV__ENSG00000136935|ENST00000373555|GOLGA1;REV__ENST00000475407.5_2_9:127642811-127683993:-|nuORF	37.81151784470057	0.4459294069877048	5				NaN	NaN	0	NaN	5072	3618	8688
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8693	26.824	NaN	723.12	30	0	78.943	0.106	+			35513	SAVDPVQMK	9	34	487.7519836425781	NaN	0	487.7519836425781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SAVDPVQMK_	ENSG00000136758|ENST00000376016|YME1L1;ENST00000463270.1_1_10:27418274-27425210:-|nuORF;nc|ENSG00000136758|Q96TA2-3|YME1L1;nc|ENSG00000136758|Q96TA2|YME1L1	34.172542307311794	0.30503706118289736	5				NaN	NaN	0	NaN	5073	3618	8688
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8694	26.826	NaN	1456.3	30	0	266.55	0.033	+			14050	GSIDAITGK	9	47	431.23675537109375	NaN	0	431.23675537109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GSIDAITGK_	ENSG00000004399|ENST00000324093|PLXND1;nc|ENSG00000004399|Q9Y4D7-2|PLXND1;PLXND1|p.P1734Hfs*40|1|0.26|ENSG00000004399|chr3:129559716-129559716|G/-|frameshift_variant;PLXND1|p.T1897Rfs*17|1|0.06|ENSG00000004399|chr3:129556402-129556402|G/-|frameshift_variant	51.19269402634007	0.19847346126499396	5				NaN	NaN	0	NaN	5074	3618	8688
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8712	26.862	NaN	1343.5	30	0	322.56	0.214			+	47487	VQEQIKIE	8	37	493.77955254351195	NaN	0	493.7787780761719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VQEQIKIE_	REV__ENSG00000111877|ENST00000619706|MCM9;REV__ENST00000436788.2_1_6:119243146-119245209:-|nuORF;REV__MCM9|p.R822Gfs*2|1|0.5|ENSG00000111877|chr6:118815792-118815792|T/-|frameshift_variant;REV__nc|ENSG00000111877|Q9NXL9-2|MCM9;REV__nc|ENSG00000111877|Q9NXL9-3|MCM9	29.14955571784316	1.7418937515398478	5				NaN	NaN	0	NaN	5089	3621	8711
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8713	26.866	NaN	1904.3	30	0	525.34	0.106	+			43665	TIYNAAIQK	9	54	511.2876553874473	NaN	0	511.2878112792969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TIYNAAIQK_	ENSG00000164169|ENST00000322396|PRMT9;nc|ENSG00000164169|Q6P2P2-2|PRMT9	62.107414245175825	0.1403307765918332	5				NaN	NaN	0	NaN	5090	3621	8711
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8714	26.868	NaN	2434.9	30	0	246.99	0.106	+			1513	AGAAVLPVK	9	50	413.2631147752037	824.5116766172074	2	413.262451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AGAAVLPVK_	ENSG00000178691|ENST00000322652|SUZ12	97.47269410471826	0.04379738608259218	5				NaN	NaN	0	NaN	5091	3621	8711
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8715	26.87	NaN	1298.1	30	0	518.19	0.035			+	26856	LVVVDSRGY	9	45	504.2799360775625	1006.5453192219251	2	504.78118896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LVVVDSRGY_	REV__ENSG00000008853|ENST00000251822|RHOBTB2;REV__ENSG00000072422|ENST00000337910|RHOBTB1;REV__nc|ENSG00000008853|Q9BYZ6-2|RHOBTB2;REV__nc|ENSG00000008853|Q9BYZ6-3|RHOBTB2;REV__RHOBTB2|p.H281Pfs*14|1|0.28|ENSG00000008853|chr8:23007083-23007084|-/C|frameshift_variant	27.882242232435846	0.5426732730940306	5				NaN	NaN	0	NaN	5092	3621	8711
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8731	26.902	NaN	3282.4	30	0	640.5	0.141			+	16652	HIALAGLR	8	54	425.76664554363145	849.5187381540629	2	425.7667541503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HIALAGLR_	REV__ENST00000295112.13_1_2:55509501-55511570:+|nuORF;REV__ENST00000563365.1_2_2:55509501-55509765:+|nuORF;REV__nc|ENSG00000293422|A6NEY8|PRORSD1P	74.51659920185547	0.36926395944126233	5				NaN	NaN	0	NaN	5105	3624	8730
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8763	26.974	NaN	2073.6	30	0	652.15	0.214			+	29920	PLSPDALLDT	10	54	521.2777949225601	1040.5410369119202	2	521.27880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PLSPDALLDT_	REV__ENSG00000172572|ENST00000359062|PDE3A;REV__ENST00000544307.1_1_12:20725060-20833202:+|nuORF	34.172542307311794	0.6007644933930345	5				NaN	NaN	0	NaN	5131	3630	8762
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8764	26.977	NaN	1048.7	30	0	138.83	0.034			+	45160	TVLWGQNAA	9	38	480.25290025607933	958.4912475789587	2	480.2524719238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVLWGQNAA_	REV__ENSG00000112249|ENST00000369162|ASCC3	29.14955571784316	0.5308295550522326	5				NaN	NaN	0	NaN	5132	3630	8762
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8781	27.012	NaN	2356.2	30	0	473.52	0.214				-1	LVLCRLEAQ	9	36	367.8737398291868	NaN	0	367.873779296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_LVLC(Carbamidomethyl (C))RLEAQ_	ENSG00000165730|ENST00000298596|STOX1;nc|ENSG00000165730|Q6ZVD7-2|STOX1;nc|ENSG00000165730|Q6ZVD7-3|STOX1;STOX1|p.N614Mfs*3|1|0.35|ENSG00000165730|chr10:68885634-68885634|A/-|frameshift_variant	25.57405402267927	0.3484490411150625	5				NaN	NaN	0	NaN	5146	3633	8780
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8782	27.016	NaN	1323.4	30	0	138.48	0.034			+	10399	EVEKSPRP	8	48	471.2558397594488	940.4971265856976	2	471.2566223144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EVEKSPRP_	REV__ENSG00000164294|ENST00000503787|GPX8	38.80614096846853	0.6637206697844082	5				NaN	NaN	0	NaN	5147	3633	8780
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8799	27.05	NaN	1953	30	0	229.68	0.214	+			48566	VTQALNVL	8	52	429.25824798838636	856.5019430435727	2	429.2579345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTQALNVL_	ENSG00000106009|ENST00000340611|BRAT1;ENST00000469750.5_1_7:2583168-2595320:-|nuORF;ENST00000493232.5_1_7:2583168-2583660:-|nuORF;nc|ENSG00000106009|Q6PJG6-2|BRAT1	71.29570347882199	0.39610197767395533	5				NaN	NaN	0	NaN	5161	3636	8798
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8800	27.054	NaN	2052.7	30	0	813.09	0.036	+			2764	ARKLEAIFQ	9	54	538.3181784650233	NaN	0	538.3184204101562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ARKLEAIFQ_	CD2BP2|p.P325Lfs*58|2|0.27|ENSG00000169217|chr16:30353037-30353037|G/-|frameshift_variant	80.45461616416974	0.0698259577396595	5				NaN	NaN	0	NaN	5162	3636	8798
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8817	27.089	NaN	2568.5	30	0	454.12	0.214	+			31732	QPAENVNQY	9	52	531.7462801049579	1061.4780072767157	2	531.7473754882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QPAENVNQY_	ENSG00000130985|ENST00000335972|UBA1;nc|ENSG00000130985|P22314-2|UBA1	62.107414245175825	0.1960472003779324	5				NaN	NaN	0	NaN	5176	3639	8816
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8818	27.092	NaN	2650.5	30	0	608.17	0.037			+	28343	NEILKLLWN	9	31	381.5560059796797	1141.6461885392391	3	381.555908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NEILKLLWN_	REV__ENST00000262041.5_1_7:15650860-15651031:-|nuORF	34.172542307311794	0.4838870758800184	5				NaN	NaN	0	NaN	5177	3639	8816
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8835	27.127	NaN	2117.2	30	0	498.76	0.214	+			2083	ALDVVFVI	8	43	438.26382863513106	NaN	0	438.2637634277344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ALDVVFVI_	ENSG00000142173|ENST00000300527|COL6A2;nc|ENSG00000142173|P12110-2|COL6A2;nc|ENSG00000142173|P12110-3|COL6A2	46.76643321282427	1.7418937515398478	5				NaN	NaN	0	NaN	5191	3642	8834
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8836	27.13	NaN	1720.4	30	0	178.41	0.033	+			13242	GILKCLVL	8	48	429.77808042588055	NaN	0	429.7782287597656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GILKCLVL_	ENSG00000146263|ENST00000683635|MMS22L	65.89745868150666	1.7418937515398478	5				NaN	NaN	0	NaN	5192	3642	8834
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8851	27.161	NaN	2297.2	30	0	309.24	0.214	+			38519	SSCGLPLGK	9	45	459.7391170146202	917.4636810960404	2	459.7391662597656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SSC(Carbamidomethyl (C))GLPLGK_	ENSG00000064042|ENST00000503057|LIMCH1;nc|ENSG00000064042|Q9UPQ0-10|LIMCH1;nc|ENSG00000064042|Q9UPQ0-2|LIMCH1;nc|ENSG00000064042|Q9UPQ0-3|LIMCH1;nc|ENSG00000064042|Q9UPQ0-4|LIMCH1;nc|ENSG00000064042|Q9UPQ0-5|LIMCH1;nc|ENSG00000064042|Q9UPQ0-6|LIMCH1;nc|ENSG00000064042|Q9UPQ0-8|LIMCH1;nc|ENSG00000064042|Q9UPQ0-9|LIMCH1;nc|ENSG00000064042|Q9UPQ0|LIMCH1	66.42927471994793	0.16001998865088202	5				NaN	NaN	0	NaN	5204	3645	8850
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8852	27.165	NaN	851.6	30	0	120.15	0.106			+	-1	FLMIVILQ	8	49	496.7983093261719	NaN	0	496.7983093261719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_FLM(Oxidation (M))IVILQ_	REV__ENSG00000189181|ENST00000342623|OR14I1;REV__OR14I1|p.S240F|1|0.08|ENSG00000189181|chr1:248681586-248681586|G/A|missense_variant	37.028477286268924	1.7418937515398478	5				NaN	NaN	0	NaN	5205	3645	8850
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8853	27.167	NaN	1766.8	30	0	385.08	0.037	+			48399	VTIFIRGGNK	10	37	368.8887634277344	NaN	0	368.8887634277344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTIFIRGGNK_	ENSG00000150753|ENST00000280326|CCT5;ENST00000423695.6_1_5:10250480-10261980:+|nuORF;nc|ENSG00000150753|P48643-2|CCT5	33.921630207806714	0.38879399011744475	5				NaN	NaN	0	NaN	5206	3645	8850
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8888	27.246	NaN	2671.5	30	0	509.82	0.214			+	-1	PSLTNVMTK	9	52	503.7656394151098	1005.5167258970196	2	503.7658996582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_PSLTNVM(Oxidation (M))TK_	REV__ENSG00000070526|ENST00000156626|ST6GALNAC1;REV__ENST00000590878.1_1_17:74623349-74639792:-|nuORF;REV__ENST00000592042.5_1_17:74621414-74633692:-|nuORF	67.49366992349736	0.1516260258713357	5				NaN	NaN	0	NaN	5235	3651	8887
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8889	27.249	NaN	2090.7	30	0	289.38	0.106	+			50853	YEVKSENL	8	53	491.24765311984345	980.4807533064869	2	491.24847412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YEVKSENL_	ENSG00000132383|ENST00000254719|RPA1	51.33545320467046	0.5859736979383976	5				NaN	NaN	0	NaN	5236	3651	8887
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8890	27.251	NaN	973.94	30	0	99.269	0.106	+			1086	AELATRAL	8	46	422.74825478073626	843.4819566282725	2	422.7483215332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AELATRAL_	ENSG00000173801|ENST00000393931|JUP	56.72105179125745	0.5342425954139568	5				NaN	NaN	0	NaN	5237	3651	8887
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8891	27.253	NaN	908.99	30	0	153.82	0.033	+			45833	VAKKMNLDMRK	11	47	445.25361736960053	NaN	0	445.25341796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VAKKMNLDMRK_	ENSG00000089250|ENST00000317775|NOS1;nc|ENSG00000089250|P29475-2|NOS1;nc|ENSG00000089250|P29475-3|NOS1;nc|ENSG00000089250|P29475-5|NOS1;NOS1|p.G676Afs*64|2|0.23|ENSG00000089250|chr12:117265425-117265425|C/-|frameshift_variant;NOS1|p.L911Qfs*6|1|0.04|ENSG00000089250|chr12:117247436-117247439|CCCA/-|frameshift_variant;NOS1|p.M688Cfs*52|1|0.39|ENSG00000089250|chr12:117265391-117265391|G/-|frameshift_variant	34.08650109265054	0.41350691770670583	5				NaN	NaN	0	NaN	5238	3651	8887
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8908	27.29	NaN	5034.3	30	0	885.73	0.214	+			34355	RTQGLMIMK	9	63	539.2981549765565	1076.5817570199129	2	539.2994384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTQGLMIMK_	ENSG00000137275|ENST00000259808|RIPK1;nc|ENSG00000137275|Q13546-2|RIPK1	72.2432373244024	0.13108886737667413	5				NaN	NaN	0	NaN	5252	3654	8907
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8909	27.293	NaN	5510.5	30	0	2455.1	0.106	+			48695	VTTGSEGLLK	10	57	502.7846520426599	1003.5547511521198	2	502.7844543457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTTGSEGLLK_	ENSG00000134987|ENST00000513710|WDR36;ENST00000505303.5_1_5:110428043-110447004:+|nuORF;nc|ENSG00000134987|Q8NI36|WDR36	98.58198989935565	0.0819402597096128	5				NaN	NaN	0	NaN	5253	3654	8907
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8910	27.295	NaN	2242.2	30	0	387.49	0.106	+			24731	LHQPSAAAHL	10	50	522.782506755621	1043.5504605780418	2	522.7830810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LHQPSAAAHL_	ENST00000599643.5_1_19:41211049-41220034:-|nuORF	30.317721548370564	0.6322445173429027	5				NaN	NaN	0	NaN	5254	3654	8907
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8911	27.297	NaN	1926.2	30	0	295.06	0.106	+			43446	TGLSTAVLAA	10	48	452.260760695872	902.5069684585441	2	452.2607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TGLSTAVLAA_	ENSG00000213689|ENST00000625293|TREX1;nc|ENSG00000213689|Q9NSU2-1|TREX1;nc|ENSG00000213689|Q9NSU2-2|TREX1	34.172542307311794	0.6007644933930345	5				NaN	NaN	0	NaN	5255	3654	8907
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8912	27.299	NaN	1846.2	30	0	160.72	0.034	+			27625	MPPYPGPGH	9	47	476.7206517378743	NaN	0	476.720947265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MPPYPGPGH_	ENSG00000171747|ENST00000307751|LGALS4	60.403631409065575	0.14759742458823122	5				NaN	NaN	0	NaN	5256	3654	8907
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8927	27.331	NaN	9021	30	0	1977.4	0.214	+			16216	HEDKIRVVL	9	57	370.2205947407611	NaN	0	370.2205505371094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HEDKIRVVL_	EHD1|p.E248Rfs*50|1|0.19|ENSG00000110047|chr11:64860098-64860098|G/-|frameshift_variant;ENSG00000024422|ENST00000263277|EHD2;ENSG00000110047|ENST00000320631|EHD1;nc|ENSG00000024422|Q9NZN4-2|EHD2	55.50420428727701	0.16876052142120426	5				NaN	NaN	0	NaN	5268	3657	8926
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8928	27.334	NaN	1175.7	30	0	187.41	0.035	+			44489	TSSDVIEMK	9	47	505.2472839355469	NaN	0	505.2472839355469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TSSDVIEMK_	ENSG00000039123|ENST00000230640|MTREX	54.776311868738084	0.17377682019723872	5				NaN	NaN	0	NaN	5269	3657	8926
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8946	27.372	NaN	2582.1	30	0	501.89	0.214	+			38137	SQADGSFLK	9	53	476.74035271554936	951.4661524978987	2	476.74102783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SQADGSFLK_	ENSG00000152818|ENST00000367545|UTRN;nc|ENSG00000152818|P46939-2|UTRN;UTRN|p.G3160*|1|0.03|ENSG00000152818|chr6:144821001-144821002|AG/-|frameshift_variant;UTRN|p.R3003Pfs*5|1|0.27|ENSG00000152818|chr6:144793915-144793916|-/C|frameshift_variant;UTRN|p.T2422Hfs*35|1|0.47|ENSG00000152818|chr6:144557282-144557282|A/-|frameshift_variant	52.936696900407355	0.27249468807391813	5				NaN	NaN	0	NaN	5284	3660	8945
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8947	27.375	NaN	658.7	30	0	428.2	0.106			+	2311	AMIEAAPVLL	10	16	343.1995849609375	NaN	0	343.1995849609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AMIEAAPVLL_	REV__HHLA1|p.A371V|1|0.18|ENSG00000132297|chr8:132077785-132077785|G/A|missense_variant	17.468008924990375	0.4201028297492154	5				NaN	NaN	0	NaN	5285	3660	8945
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8948	27.377	NaN	624.12	30	0	54.083	0.034			+	50858	YEVQATSL	8	41	455.7298889160156	NaN	0	455.7298889160156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YEVQATSL_	REV__ENSG00000054523|ENST00000676179|KIF1B;REV__nc|ENSG00000054523|O60333-2|KIF1B;REV__nc|ENSG00000054523|O60333-4|KIF1B	31.529811441608018	1.7418937515398478	5				NaN	NaN	0	NaN	5286	3660	8945
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8964	27.411	NaN	3328.9	30	0	464.4	0.214	+			38811	SSMVFTTSK	9	59	494.2444339823841	986.4743150315683	2	494.24444580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSMVFTTSK_	ENSG00000112818|ENST00000230588|MEP1A	80.45461616416974	0.09558281504443908	5				NaN	NaN	0	NaN	5299	3663	8963
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8965	27.415	NaN	1947	30	0	281.96	0.106	+			35999	SEHVKLEQL	9	61	541.7960815429688	NaN	0	541.7960815429688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEHVKLEQL_	ARHGAP1|p.L237Cfs*135|2|0.38|ENSG00000175220|chr11:46680674-46680674|G/-|frameshift_variant;ARHGAP1|p.L237Rfs*135|1|0.37|ENSG00000175220|chr11:46680673-46680673|A/-|frameshift_variant;ENSG00000175220|ENST00000311956|ARHGAP1	85.86182877749512	0.05129763505578642	5				NaN	NaN	0	NaN	5300	3663	8963
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8966	27.417	NaN	968.96	30	0	168.23	0.035	+			50488	YALKGERLV	9	46	524.8110948142206	1047.6076366952411	2	524.8117065429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YALKGERLV_	ENST00000490450.5_1_21:46197196-46221244:-|nuORF	21.9598887501803	0.5980208138527809	5				NaN	NaN	0	NaN	5301	3663	8963
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8983	27.452	NaN	1180.4	30	0	242.3	0.215			+	22842	KVIEDATAM	9	47	489.2521057128906	NaN	0	489.2521057128906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVIEDATAM_	REV__ENSG00000149476|ENST00000394900|TKFC;REV__ENST00000524953.1_1_11:61110045-61110363:+|nuORF;REV__nc|ENSG00000149476|Q3LXA3-2|TKFC	45.9519527083369	0.2345902329052062	5				NaN	NaN	0	NaN	5315	3666	8982
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8984	27.456	NaN	2090.8	30	0	1062.3	0.033	+			23508	LAGTVTPAR	9	39	443.26066533403184	NaN	0	443.261474609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LAGTVTPAR_	ENST00000374597.3_3_X:67913533-67935165:+|nuORF	40.77816245573522	0.2702456086868081	5				NaN	NaN	0	NaN	5316	3666	8982
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9002	27.493	NaN	12984	30	0	8723.6	0.142	+			286	AAPAYSRAL	9	57	460.25333549901	918.49211806482	2	460.25341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAPAYSRAL_	ENSG00000106211|ENST00000248553|HSPB1	77.31757898189308	0.1091473830098891	5				NaN	NaN	0	NaN	5331	3669	9001
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9020	27.533	NaN	2781.8	30	0	874.91	0.214	+			29374	PAHPAATL	8	38	389.2162641919656	776.4179754507312	2	389.2163391113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PAHPAATL_	ENST00000430767.8_1_17:75210112-75210223:+|nuORF	28.2542754592877	0.7411748056684583	5				NaN	NaN	0	NaN	5346	3672	9019
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9021	27.536	NaN	1441.9	30	0	285.52	0.106	+			37711	SLSSLTNI	8	40	417.7323330460035	833.450113158807	2	417.7323303222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLSSLTNI_	ENSG00000114656|ENST00000645291|CFAP92;nc|ENSG00000114656|Q9ULG3-2|CFAP92;nc|ENSG00000114656|Q9ULG3|CFAP92	63.30626980617807	0.4690498839812213	5				NaN	NaN	0	NaN	5347	3672	9019
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9022	27.538	NaN	2067.7	30	0	372.41	0.035	+			47003	VKTLKDLGI	9	56	493.81589471849327	985.6172365037866	2	493.8160400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VKTLKDLGI_	ENSG00000172752|ENST00000373157|COL6A5;nc|ENSG00000172752|A8TX70-2|COL6A5;nc|ENSG00000172752|A8TX70|COL6A5	42.86426827375447	0.38666266728046506	5				NaN	NaN	0	NaN	5348	3672	9019
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9039	27.574	NaN	3652.7	30	0	476.09	0.214	+			10656	EYQKVGQSF	9	59	543.2666713645057	1084.5187897958112	2	543.2680053710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EYQKVGQSF_	ENSG00000178996|ENST00000381410|SNX18;nc|ENSG00000178996|Q96RF0-3|SNX18;nc|ENSG00000178996|Q96RF0|SNX18	176.44474024533739	0.0016668318535579616	5				NaN	NaN	0	NaN	5362	3675	9038
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9040	27.577	NaN	1340.2	30	0	256.41	0.034			+	44632	TTFQTKIE	8	43	484.2588175890294	NaN	0	484.259033203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTFQTKIE_	REV__ENSG00000140153|ENST00000342702|WDR20;REV__ENST00000561154.1_1_14:102606260-102633856:+|nuORF;REV__nc|ENSG00000140153|Q8TBZ3-2|WDR20;REV__nc|ENSG00000140153|Q8TBZ3-3|WDR20;REV__nc|ENSG00000140153|Q8TBZ3-4|WDR20;REV__nc|ENSG00000140153|Q8TBZ3-5|WDR20;REV__nc|ENSG00000140153|Q8TBZ3-6|WDR20;REV__nc|ENSG00000140153|Q8TBZ3-7|WDR20;REV__nc|ENSG00000140153|Q8TBZ3-8|WDR20	40.77816245573522	1.7418937515398478	5				NaN	NaN	0	NaN	5363	3675	9038
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9057	27.613	NaN	1649.9	30	0	248.65	0.214	+			17227	HVITKTMEL	9	59	536.296849046913	1070.579145160626	2	536.2981567382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HVITKTMEL_	ENSG00000153201|ENST00000283195|RANBP2;RANBP2|p.F3068Lfs*10|1|0.06|ENSG00000153201|chr2:108782692-108782692|T/-|frameshift_variant;RANBP2|p.H3114Sfs*18|1|0.33|ENSG00000153201|chr2:108782827-108782828|-/T|frameshift_variant	74.25504064058377	0.12238981753128622	5				NaN	NaN	0	NaN	5377	3678	9056
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9058	27.616	NaN	2339.8	30	0	658.43	0.106	+			29060	NTIDPSHPM	9	58	506.23176621949324	1010.4489795057865	2	506.2320251464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NTIDPSHPM_	ENSG00000090861|ENST00000261772|AARS1;nc|ENSG00000090861|P49588-2|AARS1	68.78682469695295	0.14603441672067394	5				NaN	NaN	0	NaN	5378	3678	9056
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9059	27.619	NaN	3503.3	30	0	1073.1	0.035	+			48924	VVDQTTLMK	9	57	517.7813116368397	1033.5480703404794	2	517.7815551757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVDQTTLMK_	ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;TRRAP-ASNS|1|fusion;TRRAP-ASNS|2|fusion;TRRAP|p.A1620Cfs*35|1|0.27|ENSG00000196367|chr7:98949499-98949500|-/G|frameshift_variant;TRRAP|p.I564Hfs*9|1|0.29|ENSG00000196367|chr7:98910389-98910390|-/G|frameshift_variant;TRRAP|p.K3443Sfs*19|1|0.28|ENSG00000196367|chr7:99004246-99004246|A/-|frameshift_variant;TRRAP|p.L291*|1|0.36|ENSG00000196367|chr7:98900691-98900691|T/-|frameshift_variant;TRRAP|p.P1292Lfs*17|1|0.44|ENSG00000196367|chr7:98933258-98933258|C/-|frameshift_variant;TRRAP|p.P1360Afs*14|1|0.05|ENSG00000196367|chr7:98935641-98935642|-/GCAAATAA|frameshift_variant	94.4091291819064	0.0524345700464502	5				NaN	NaN	0	NaN	5379	3678	9056
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9076	27.655	NaN	5186.1	30	0	1620.9	0.214	+			40663	SVASGSGFIV	10	48	462.24539998660543	922.4762470400109	2	462.24542236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVASGSGFIV_	HTRA1|p.P200S|1|0.33|ENSG00000166033|chr10:122489447-122489447|C/T|missense_variant	42.396135135203025	0.5270658956260207	5				NaN	NaN	0	NaN	5393	3681	9075
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9077	27.658	NaN	1039.3	30	0	208.8	0.106	+			47730	VSGEPLLAK	9	42	457.27149797431656	912.5284430154331	2	457.27166748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSGEPLLAK_	ENSG00000204104|ENST00000373327|TRAF3IP1;nc|ENSG00000204104|Q8TDR0-2|TRAF3IP1;TRAF3IP1|p.E258Rfs*5|2|0.24|ENSG00000204104|chr2:238329189-238329189|G/-|frameshift_variant	54.776311868738084	0.25715957988447635	5				NaN	NaN	0	NaN	5394	3681	9075
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9078	27.66	NaN	1780.1	30	0	530.29	0.034	+			45180	TVMNGALVK	9	45	466.765664066198	931.516775199196	2	466.7657775878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVMNGALVK_	ENSG00000131389|ENST00000622186|SLC6A6;SLC6A6|p.R601H|1|0.36|ENSG00000131389|chr3:14484946-14484946|G/A|missense_variant	51.33545320467046	0.2872990594074956	5				NaN	NaN	0	NaN	5395	3681	9075
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9096	27.699	NaN	1113.6	30	0	111.37	0.214	+			436	AAVDAGMAM	9	50	426.68328857421875	NaN	0	426.68328857421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_AAVDAGM(Oxidation (M))AM_	ENSG00000011304|ENST00000356948|PTBP1;ENST00000586944.5_1_19:797434-805231:+|nuORF;nc|ENSG00000011304|P26599-1|PTBP1;nc|ENSG00000011304|P26599-2|PTBP1	92.19062340807069	0.03718038652789202	5				NaN	NaN	0	NaN	5410	3684	9095
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9097	27.702	NaN	1702.6	30	0	285.78	0.035	+			29746	PHRHDLEN	8	54	509.2479890153304	NaN	0	509.24835205078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PHRHDLEN_	sp|F5HG95|US29_HCMVMUncharacterizedproteinUS29OS=Humancytomegalovirus(strainMerlin)OX=295027GN=US29PE=3SV=1;sp|P09705|US29_HCMVAUncharacterizedproteinHHRF4OS=Humancytomegalovirus(strainAD169)OX=10360GN=US29PE=3SV=1	44.116797842482775	1.7418937515398478	5				NaN	NaN	0	NaN	5411	3684	9095
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9115	27.74	NaN	4876.4	30	0	783.43	0.214	+			19905	KEFDGKSLV	9	68	511.779438061872	1021.544323190544	2	511.7799377441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEFDGKSLV_	ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;ENST00000517330.1_1_5:77337712-77337985:-|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P;nc|ENSG00000205940|Q58FF8|HSP90AB2P	101.45984612302182	0.0377122763612125	5				NaN	NaN	0	NaN	5426	3687	9114
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9116	27.744	NaN	24143	30	0	3442.3	0.106	+			48202	VTAKELSLVNK	11	81	401.2431063922984	1200.7074897770951	3	401.24322509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTAKELSLVNK_	ENSG00000050405|ENST00000341247|LIMA1;LIMA1|p.T536Lfs*38|2|0.4|ENSG00000050405|chr12:50177739-50177739|G/-|frameshift_variant;nc|ENSG00000050405|Q9UHB6-4|LIMA1	89.56079334093651	0.10057263200875313	5				NaN	NaN	0	NaN	5427	3687	9114
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9117	27.746	NaN	1472	30	0	232.79	0.035			+	-1	PPRSAGVMAE	10	53	515.7514922544422	1029.4884315756842	2	516.2531127929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_PPRSAGVM(Oxidation (M))AE_	REV__DOK7|p.G308R|1|0.06|ENSG00000175920|chr4:3492908-3492908|G/A|missense_variant;REV__DOK7|p.S422Hfs*34|2|0.24|ENSG00000175920|chr4:3493243-3493243|C/-|frameshift_variant;REV__ENSG00000175920|ENST00000340083|DOK7;REV__nc|ENSG00000175920|Q18PE1-2|DOK7;REV__nc|ENSG00000175920|Q18PE1-3|DOK7	39.252832667884924	0.5560298534376815	5				NaN	NaN	0	NaN	5428	3687	9114
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9135	27.783	NaN	7859.1	30	0	6052.5	0.214				-1	 	0	32	343.19885806867285	684.3831632041457	2	343.1990661621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5443	3690	9134
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9136	27.787	NaN	1079.1	30	0	208.15	0.106			+	48462	VTLNIDGL	8	39	422.7422180175781	NaN	0	422.7422180175781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTLNIDGL_	REV__ENST00000565642.5_1_16:71777395-71799448:-|nuORF	60.97194046774394	1.7418937515398478	5				NaN	NaN	0	NaN	5444	3690	9134
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9137	27.789	NaN	1565	30	0	112.69	0.036	+			16551	HEVRIQPSL	9	57	539.8045654296875	NaN	0	539.8045654296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HEVRIQPSL_	ENSG00000145868|ENST00000340253|FBXO38;ENST00000502571.1_1_5:147784249-147790417:+|nuORF;FBXO38|p.N697Kfs*44|1|0.3|ENSG00000145868|chr5:148427376-148427377|-/A|frameshift_variant;FBXO38|p.N697Tfs*32|1|0.21|ENSG00000145868|chr5:148427377-148427377|A/-|frameshift_variant;FBXO38|p.S849Afs*20|1|0.38|ENSG00000145868|chr5:148427834-148427834|G/-|frameshift_variant;nc|ENSG00000145868|Q6PIJ6-2|FBXO38;nc|ENSG00000145868|Q6PIJ6-3|FBXO38	41.42661286455405	0.26577678759562784	5				NaN	NaN	0	NaN	5445	3690	9134
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9171	27.863	NaN	892.79	30	0	43.303	0.144			+	-1	KGFCLSIQR	9	49	554.7998657226562	NaN	0	554.7998657226562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_KGFC(Carbamidomethyl (C))LSIQR_	REV__nc|ENSG00000211448|Q92813-3|DIO2	40.77816245573522	0.2702456086868081	5				NaN	NaN	0	NaN	5473	3696	9170
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9189	27.902	NaN	9657.4	30	0	2499.7	0.214	+			39467	STFDTQITK	9	63	520.7666243647637	1039.5186957963274	2	520.7677001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STFDTQITK_	ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC;PRKDC|p.D2437Wfs*3|1|0.11|ENSG00000253729|chr8:47840161-47840162|-/CA|frameshift_variant;PRKDC|p.K3681Nfs*6|1|0.32|ENSG00000253729|chr8:47785174-47785177|TTCT/-|frameshift_variant;PRKDC|p.M3670*|1|0.5|ENSG00000253729|chr8:47785212-47785212|T/-|frameshift_variant;PRKDC|p.M3846Cfs*12|1|0.13|ENSG00000253729|chr8:47779047-47779047|T/-|frameshift_variant;PRKDC|p.M4020Cfs*2|1|0.31|ENSG00000253729|chr8:47776968-47776968|T/-|frameshift_variant;PRKDC|p.N3605Kfs*3|1|0.22|ENSG00000253729|chr8:47788993-47788994|-/T|frameshift_variant;PRKDC|p.N4037Ifs*15|1|0.17|ENSG00000253729|chr8:47776916-47776916|T/-|frameshift_variant;PRKDC|p.R2704Gfs*13|2|0.34|ENSG00000253729|chr8:47834238-47834238|T/-|frameshift_variant;PRKDC|p.S3402Ifs*16|1|0.04|ENSG00000253729|chr8:47799302-47799303|-/AAACCGTGAGTTAGAGGAGGTAA|frameshift_variant;PRKDC|p.S4099Qfs*6|1|0.25|ENSG00000253729|chr8:47774265-47774265|A/-|frameshift_variant;PRKDC|p.T3268Pfs*7|1|0.5|ENSG00000253729|chr8:47803426-47803426|T/-|frameshift_variant;PRKDC|p.W3401Cfs*4|1|0.01|ENSG00000253729|chr8:47799304-47799305|-/AATGAATA|frameshift_variant	143.37361013837676	0.008897369944672323	5				NaN	NaN	0	NaN	5488	3699	9188
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9190	27.906	NaN	13586	30	0	4505.8	0.106	+			4446	ATILAGDVKVK	11	58	372.2324499012837	1113.6755203040511	3	372.2328186035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATILAGDVKVK_	ENSG00000119669|ENST00000238647|IRF2BPL;ENSG00000168264|ENST00000366609|IRF2BP2;nc|ENSG00000168264|Q7Z5L9-2|IRF2BP2;nc|ENSG00000168264|Q7Z5L9-3|IRF2BP2	102.95473732560676	0.05457861179418332	5				NaN	NaN	0	NaN	5489	3699	9188
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9191	27.908	NaN	2349.9	30	0	753.95	0.106	+			33027	REIQTAVRL	9	64	543.3246299238257	1084.6347069144513	2	543.3261108398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_REIQTAVRL_	ENSG00000124635|ENST00000339812|H2BC11;ENSG00000146047|ENST00000274764|H2BC1;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;nc|ENSG00000203814|Q5QNW6-2|H2BC18	81.52500206392136	0.09095445986635249	5				NaN	NaN	0	NaN	5490	3699	9188
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9192	27.909	NaN	1601.6	30	0	278.75	0.106	+			39873	STLPKSLLK	9	49	493.81589471849327	985.6172365037866	2	493.8168029785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STLPKSLLK_	CKAP5|p.K1126Rfs*25|1|0.46|ENSG00000175216|chr11:46767609-46767609|T/-|frameshift_variant;CKAP5|p.V1971Lfs*42|1|0.03|ENSG00000175216|chr11:46744211-46744212|-/TTGAAAAAAAG|frameshift_variant;ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5	45.02220120713402	0.3613509778819777	5				NaN	NaN	0	NaN	5491	3699	9188
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9193	27.911	NaN	1439.9	30	0	232.71	0.106			+	-1	MLLVRETS	8	50	482.7585416638892	NaN	0	482.75860595703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_M(Oxidation (M))LLVRETS_	REV__ADCK1|p.Q416Pfs*27|1|0.38|ENSG00000063761|chr14:77931552-77931553|-/C|frameshift_variant;REV__ENSG00000063761|ENST00000238561|ADCK1;REV__nc|ENSG00000063761|Q86TW2-3|ADCK1;REV__nc|ENSG00000063761|Q86TW2|ADCK1	37.028477286268924	1.7418937515398478	5				NaN	NaN	0	NaN	5492	3699	9188
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9194	27.913	NaN	1465.4	30	0	411.9	0.032	+			35266	SALPLKQA	8	36	414.2528131490362	826.4910733648724	2	414.2528381347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SALPLKQA_	ENSG00000140563|ENST00000357742|MCTP2;ENST00000456504.5_1_15:94858078-95022260:+|nuORF;MCTP2|p.L450Sfs*29|1|0.08|ENSG00000140563|chr15:94367650-94367651|-/AGTA|frameshift_variant;nc|ENSG00000140563|Q6DN12-2|MCTP2;nc|ENSG00000140563|Q6DN12-3|MCTP2;nc|ENSG00000140563|Q6DN12-4|MCTP2	40.5726180659479	0.6527593143185008	5				NaN	NaN	0	NaN	5493	3699	9188
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9212	27.95	NaN	3153.3	30	0	468.17	0.214	+			6415	AVVQTLVAK	9	58	464.7949177990195	927.575282664839	2	465.295654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVVQTLVAK_	ENSG00000165671|ENST00000439151|NSD1;nc|ENSG00000165671|Q96L73-2|NSD1;nc|ENSG00000165671|Q96L73-3|NSD1	88.17693792209575	0.07000514020414955	5				NaN	NaN	0	NaN	5508	3702	9211
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9213	27.954	NaN	1302.8	30	0	108.62	0.034	+			24766	LIALGTGGIK	10	51	471.80255126953125	NaN	0	471.80255126953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LIALGTGGIK_	ENSG00000088386|ENST00000376503|SLC15A1;ENSG00000163406|ENST00000489711|SLC15A2;ENST00000376494.1_1_13:99373362-99378793:-|nuORF;nc|ENSG00000163406|Q16348-2|SLC15A2;SLC15A2|p.N718Tfs*2|1|0.11|ENSG00000163406|chr3:121940965-121940965|G/-|frameshift_variant	40.77816245573522	0.36390427802201647	5				NaN	NaN	0	NaN	5509	3702	9211
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9231	27.991	NaN	1955.5	30	0	156.54	0.144				-1	KILCRYQE	8	55	555.2929020010188	NaN	0	555.2923583984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_KILC(Carbamidomethyl (C))RYQE_	ENSG00000009709|ENST00000420770|PAX7;ENSG00000135903|ENST00000392070|PAX3;nc|ENSG00000009709|P23759-1|PAX7;nc|ENSG00000009709|P23759-2|PAX7;nc|ENSG00000135903|P23760-2|PAX3;nc|ENSG00000135903|P23760-3|PAX3;nc|ENSG00000135903|P23760-4|PAX3;nc|ENSG00000135903|P23760-5|PAX3;nc|ENSG00000135903|P23760-6|PAX3;nc|ENSG00000135903|P23760-8|PAX3;nc|ENSG00000135903|P23760|PAX3;PAX3|p.F294Sfs*87|1|0.25|ENSG00000135903|chr2:222221301-222221301|C/-|frameshift_variant;PAX7|p.Y303Lfs*61|1|0.09|ENSG00000009709|chr1:18700766-18700767|-/C|frameshift_variant;PAX7|p.Y303Tfs*64|1|0.19|ENSG00000009709|chr1:18700767-18700767|C/-|frameshift_variant	57.81127852772723	1.7418937515398478	5				NaN	NaN	0	NaN	5524	3705	9230
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9249	28.03	NaN	4057.5	30	0	585.17	0.214	+			1701	AGVFVDATK	9	64	454.24801649879083	906.4814800643817	2	454.24755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AGVFVDATK_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	51.52775601994872	0.28504342437107444	5				NaN	NaN	0	NaN	5539	3708	9248
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9250	28.034	NaN	2144.5	30	0	277.59	0.035			+	49484	VVYSREPY	8	60	506.75844119798995	1011.5023294627799	2	506.7584533691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVYSREPY_	REV__ENSG00000196455|ENST00000356763|PIK3R4;REV__ENST00000512362.5_1_3:130399450-130405229:-|nuORF;REV__ENST00000512677.1_1_3:130399450-130405071:-|nuORF	57.81127852772723	0.5234495074909924	5				NaN	NaN	0	NaN	5540	3708	9248
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9266	28.066	NaN	14519	30	0	2127.7	0.214	+			3745	ATADLALGR	9	69	444.2504611188613	886.4863693045227	2	444.2509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATADLALGR_	ENSG00000172037|ENST00000305544|LAMB2;ENST00000469665.1_1_3:49160056-49160527:-|nuORF	158.07458414430337	0.004987072822166904	5				NaN	NaN	0	NaN	5553	3711	9265
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9267	28.07	NaN	1914.5	30	0	390.53	0.106	+			2687	AQNSVIIVDK	10	54	543.8129721113334	NaN	0	543.8134765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AQNSVIIVDK_	ENSG00000072274|ENST00000360110|TFRC	57.148748479083515	0.2575619524842407	5				NaN	NaN	0	NaN	5554	3711	9265
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9268	28.072	NaN	518.65	30	0	123.5	0.038	+			34293	RTLGSDSVILK	11	25	594.8515242125382	NaN	0	594.8512573242188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RTLGSDSVILK_	ENST00000509320.5_1_14:73404720-73412622:+|nuORF	20.83715455343099	0.456735970842152	5				NaN	NaN	0	NaN	5555	3711	9265
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9282	28.102	NaN	7481	30	0	797.9	0.214	+			16166	HEAEVLKQL	9	75	533.7977052709647	1065.5808576087293	2	533.798095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HEAEVLKQL_	ENSG00000117632|ENST00000455785|STMN1;ENST00000465604.1_1_1:26227509-26228203:-|nuORF;ENST00000485226.1_1_1:26227942-26230296:-|nuORF;nc|ENSG00000117632|P16949-2|STMN1	127.46168284122857	0.016682644177004526	5				NaN	NaN	0	NaN	5566	3714	9281
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9283	28.105	NaN	1466.3	30	0	224.96	0.035	+			43136	TESDTAVRL	9	45	496.25640292434565	990.4982529154913	2	496.25628662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TESDTAVRL_	ENSG00000067900|ENST00000399799|ROCK1;ROCK1|p.I1150Nfs*5|1|0.23|ENSG00000067900|chr18:20959903-20959904|-/T|frameshift_variant;ROCK1|p.K1307Nfs*3|1|0.28|ENSG00000067900|chr18:20953718-20953718|T/-|frameshift_variant;ROCK1|p.K818Efs*6|1|0.51|ENSG00000067900|chr18:20984387-20984388|TT/-|frameshift_variant;ROCK1|p.N871Kfs*14|1|0.07|ENSG00000067900|chr18:20979951-20979952|-/T|frameshift_variant;ROCK1|p.N871Tfs*5|1|0.29|ENSG00000067900|chr18:20979952-20979952|T/-|frameshift_variant;ROCK1|p.P1257Lfs*3|1|0.21|ENSG00000067900|chr18:20954866-20954866|G/-|frameshift_variant	58.2462437865262	0.22823408064396822	5				NaN	NaN	0	NaN	5567	3714	9281
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9301	28.142	NaN	16358	30	0	1399.2	0.212	+			34632	RVQEAVESMVK	11	87	638.3402888122506	1274.6660246913011	2	638.3400268554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVQEAVESMVK_	ENSG00000035141|ENST00000430566|FAM136A;ENST00000460307.1_1_2:70528513-70529143:-|nuORF;ENST00000498665.1_1_2:70527944-70529143:-|nuORF;nc|ENSG00000035141|Q96C01|FAM136A	136.48854661914896	0.0007874190838222282	5				NaN	NaN	0	NaN	5582	3717	9300
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9302	28.145	NaN	3011.3	30	0	579.63	0.106	+			18763	ITNDGATILK	10	62	523.2971253831204	1044.5796978330407	2	523.2981567382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ITNDGATILK_	CCT4|p.T490Lfs*30|1|0.4|ENSG00000115484|chr2:61872105-61872105|T/-|frameshift_variant;ENSG00000115484|ENST00000394440|CCT4;ENSG00000120438|ENST00000321394|TCP1;ENST00000538128.5_2_6:160206507-160210586:-|nuORF;ENST00000543532.5_1_6:160205081-160210626:-|nuORF;ENST00000544255.5_1_6:160205081-160210586:-|nuORF;TCP1|p.A232Gfs*7|1|0.05|ENSG00000120438|chr6:159784043-159784044|-/C|frameshift_variant	104.42354056486148	0.06456012287859861	5				NaN	NaN	0	NaN	5583	3717	9300
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9303	28.147	NaN	7823.3	30	0	4108.3	0.106	+			15901	HAALETQTL	9	55	492.26108016715364	982.5076074011073	2	492.7628173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HAALETQTL_	ENSG00000176945|ENST00000447234|MUC20;ENST00000457750.1_1_3:195341833-195346985:+|nuORF;nc|ENSG00000176945|Q8N307-3|MUC20	56.43379154798735	0.2433427591689151	5				NaN	NaN	0	NaN	5584	3717	9300
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9304	28.149	NaN	2438.6	30	0	1725.8	0.033			+	46032	VAWGPFGF	8	41	440.72068623034113	879.4268195274823	2	440.7207336425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VAWGPFGF_	REV__PANK3|p.L263F|1|0.52|ENSG00000120137|chr5:168563912-168563912|C/A|missense_variant	33.49298260027079	0.7007254697536482	5				NaN	NaN	0	NaN	5585	3717	9300
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9322	28.187	NaN	7128.2	30	0	1185.7	0.215	+			28054	NAAQTSVAY	9	61	462.7245218339506	NaN	0	462.7244567871094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAAQTSVAY_	ENSG00000113643|ENST00000231572|RARS1;nc|ENSG00000113643|P54136-2|RARS1	104.0567914643314	0.015064339666778382	5				NaN	NaN	0	NaN	5600	3720	9321
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9323	28.19	NaN	2974.4	30	0	903.24	0.106	+			43706	TKLTWGPY	8	62	483.2566281633217	NaN	0	483.2564392089844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TKLTWGPY_	ENSG00000151327|ENST00000280987|FAM177A1;nc|ENSG00000151327|Q8N128|FAM177A1	31.954861631926434	1.7418937515398478	5				NaN	NaN	0	NaN	5601	3720	9321
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9324	28.192	NaN	3627.8	30	0	2047.4	0.106				-1	YSRAKKMNL	9	30	376.2048034667969	NaN	0	376.2048034667969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_YSRAKKM(Oxidation (M))NL_	ENSG00000157657|ENST00000374126|ZNF618;ENST00000470105.1_1_9:116790870-116812444:+|nuORF;nc|ENSG00000157657|Q5T7W0-2|ZNF618;nc|ENSG00000157657|Q5T7W0-4|ZNF618;ZNF618|p.N872Mfs*52|2|0.38|ENSG00000157657|chr9:114049913-114049913|A/-|frameshift_variant	27.882242232435846	0.3367954786602879	5				NaN	NaN	0	NaN	5602	3720	9321
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9325	28.194	NaN	4644.9	30	0	459.26	0.106	+			34633	RVQEAVESMVK	11	50	425.89571854417767	NaN	0	425.8957824707031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RVQEAVESMVK_	ENSG00000035141|ENST00000430566|FAM136A;ENST00000460307.1_1_2:70528513-70529143:-|nuORF;ENST00000498665.1_1_2:70527944-70529143:-|nuORF;nc|ENSG00000035141|Q96C01|FAM136A	45.908116695636124	0.34470816508309304	5				NaN	NaN	0	NaN	5603	3720	9321
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9326	28.196	NaN	1427	30	0	253.8	0.106	+			35064	SAFGGSLPAK	10	49	467.7531054015146	NaN	0	467.7529296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SAFGGSLPAK_	ENSG00000147874|ENST00000380502|HAUS6;HAUS6|p.S530Vfs*12|1|0.3|ENSG00000147874|chr9:19063049-19063049|T/-|frameshift_variant;nc|ENSG00000147874|Q7Z4H7-2|HAUS6;nc|ENSG00000147874|Q7Z4H7-3|HAUS6	47.95952297671804	0.31850267256932663	5				NaN	NaN	0	NaN	5604	3720	9321
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9327	28.198	NaN	4968	30	0	1029.6	0.034	+			40547	SVAAPITVR	9	52	457.27649656098276	912.5384401887655	2	457.2764892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVAAPITVR_	ENSG00000170242|ENST00000527733|USP47;nc|ENSG00000170242|Q96K76-2|USP47;nc|ENSG00000170242|Q96K76|USP47;USP47|p.G1121Efs*22|2|0.29|ENSG00000170242|chr11:11948505-11948505|A/-|frameshift_variant	45.97224482568171	0.3502073465782774	5				NaN	NaN	0	NaN	5605	3720	9321
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9328	28.198	NaN	1206.3	30	0	133.97	0.139	+			40958	SVFYGAPSK	9	38	478.2475673327227	NaN	0	478.2475891113281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVFYGAPSK_	ENSG00000224389|ENST00000435363|C4B;ENSG00000244731|ENST00000428956|C4A;ENST00000468237.5_1_6:32001530-32003051:+|nuORF;ENST00000468936.5_1_6:31999682-32002424:+|nuORF;ENST00000496560.1_1_6:32001776-32002287:+|nuORF;nc|ENSG00000244731|P0C0L4-2|C4A	41.42661286455405	0.26577678759562784	5				NaN	NaN	0	NaN	5606	3720	9321
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9346	28.237	NaN	15042	30	0	4106.4	0.214	+			35886	SEERFRPSL	9	73	560.7907825359256	1119.567012138651	2	560.7913208007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEERFRPSL_	CTNNA1|p.K493Nfs*31|1|0.19|ENSG00000044115|chr5:138917827-138917827|A/-|frameshift_variant;CTNNA1|p.T832*|1|0.29|ENSG00000044115|chr5:138933859-138933862|CAGA/-|frameshift_variant;ENSG00000044115|ENST00000302763|CTNNA1;ENST00000522730.1_1_5:138160461-138163428:+|nuORF;nc|ENSG00000044115|P35221-2|CTNNA1	76.16968421966216	0.11411088698345859	5				NaN	NaN	0	NaN	5621	3723	9345
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9347	28.241	NaN	1546.4	30	0	134.15	0.106	+			27250	MERIMKAQAL	10	57	595.8233642578125	NaN	0	595.8233642578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MERIMKAQAL_	ENSG00000080824|ENST00000216281|HSP90AA1;ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000378770.1_1_4:190394307-190396341:+|nuORF;ENST00000506915.1_1_4:190395906-190396341:+|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000205100|Q58FG1|HSP90AA4P	60.1669710687717	0.23291468416755162	5				NaN	NaN	0	NaN	5622	3723	9345
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9348	28.243	NaN	2309.4	30	0	529.15	0.032	+			35685	SDIKGSVL	8	44	409.73461512170155	817.4546773102031	2	409.73468017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SDIKGSVL_	ENSG00000163956|ENST00000650182|LRPAP1;ENST00000296325.9_1_4:3514703-3533784:-|nuORF;ENST00000515119.5_1_4:3517776-3534065:-|nuORF	84.9155231211612	0.2928622555056503	5				NaN	NaN	0	NaN	5623	3723	9345
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9366	28.281	NaN	5510.5	30	0	501.22	0.214	+			43939	TPASAGHVW	9	68	463.22834121184815	924.4421294904963	2	463.2297058105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TPASAGHVW_	ENSG00000125398|ENST00000245479|SOX9;SOX9|p.A379Gfs*5|1|0.71|ENSG00000125398|chr17:72123990-72123991|-/GG|frameshift_variant;SOX9|p.E388*|1|0.21|ENSG00000125398|chr17:72124012-72124054|GAGCAGCGAGCCGGGCCAGTCCCAGCGAACGCACATCAAGACG/-|frameshift_variant;SOX9|p.F423Sfs*47|1|0.36|ENSG00000125398|chr17:72124124-72124124|T/-|frameshift_variant;SOX9|p.G390Rfs*14|1|0.67|ENSG00000125398|chr17:72124021-72124022|-/CC|frameshift_variant;SOX9|p.H396Rfs*8|1|0.11|ENSG00000125398|chr17:72124040-72124041|-/CG|frameshift_variant;SOX9|p.H413Lfs*58|1|0.37|ENSG00000125398|chr17:72124094-72124095|-/TG|frameshift_variant;SOX9|p.I435Sfs*35|1|0.25|ENSG00000125398|chr17:72124157-72124157|C/-|frameshift_variant;SOX9|p.P374Rfs*9|1|0.38|ENSG00000125398|chr17:72123974-72123974|C/-|frameshift_variant;SOX9|p.Q416Nfs*54|1|0.48|ENSG00000125398|chr17:72124100-72124100|C/-|frameshift_variant;SOX9|p.S408Tfs*64|1|0.62|ENSG00000125398|chr17:72124072-72124073|-/CACTA|frameshift_variant;SOX9|p.S448*|1|0.34|ENSG00000125398|chr17:72124200-72124201|CC/-|frameshift_variant	115.45897859103373	0.02394878348088707	5				NaN	NaN	0	NaN	5638	3726	9365
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9367	28.284	NaN	2426.1	30	0	483.44	0.106	+			36435	SEVAMHSL	8	45	437.2104021920234	872.4062514508469	2	437.2105407714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEVAMHSL_	ENSG00000100290|ENST00000216115|BIK	115.45897859103373	0.24104770225811847	5				NaN	NaN	0	NaN	5639	3726	9365
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9368	28.286	NaN	1404.4	30	0	317.12	0.032	+			35267	SALPLKQA	8	39	414.2528131490362	826.4910733648724	2	414.2532958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SALPLKQA_	ENSG00000140563|ENST00000357742|MCTP2;ENST00000456504.5_1_15:94858078-95022260:+|nuORF;MCTP2|p.L450Sfs*29|1|0.08|ENSG00000140563|chr15:94367650-94367651|-/AGTA|frameshift_variant;nc|ENSG00000140563|Q6DN12-2|MCTP2;nc|ENSG00000140563|Q6DN12-3|MCTP2;nc|ENSG00000140563|Q6DN12-4|MCTP2	44.116797842482775	0.6307669463330267	5				NaN	NaN	0	NaN	5640	3726	9365
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9386	28.324	NaN	3212.7	30	0	362.2	0.214			+	16318	HEIEKVNK	8	60	498.7774811013732	995.5404092695464	2	498.77777099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HEIEKVNK_	REV__ENSG00000084731|ENST00000264712|KIF3C;REV__KIF3C|p.N333Efs*19|1|0.19|ENSG00000084731|chr2:25980921-25980922|-/C|frameshift_variant	66.42927471994793	0.4381325844043345	5				NaN	NaN	0	NaN	5655	3729	9385
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9387	28.327	NaN	3209.5	30	0	467.53	0.034	+			41787	SVSQAVFAR	9	57	482.7643950170011	963.5142371008022	2	482.7646789550781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVSQAVFAR_	ENSG00000119042|ENST00000417098|SATB2;ENST00000483346.2_1_2:200213306-200233427:-|nuORF;nc|ENSG00000119042|Q9UPW6-2|SATB2	98.58198989935565	0.04066992115528678	5				NaN	NaN	0	NaN	5656	3729	9385
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9404	28.362	NaN	1683.1	30	0	689.5	0.144	+			16774	HNPEPTKSF	9	51	528.7596438981637	NaN	0	528.7581176757812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HNPEPTKSF_	ENSG00000141298|ENST00000540801|SSH2;nc|ENSG00000141298|Q76I76|SSH2	30.503639358989545	0.3235605894931338	5				NaN	NaN	0	NaN	5670	3732	9403
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9422	28.401	NaN	7446.6	30	0	4543.1	0.214	+			41569	SVQEYFVRK	9	45	385.87676551041415	1154.6084671314425	3	385.8767395019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVQEYFVRK_	ENSG00000163781|ENST00000260810|TOPBP1;TOPBP1|p.K1266Nfs*10|1|0.13|ENSG00000163781|chr3:133616887-133616887|T/-|frameshift_variant;TOPBP1|p.R1378Sfs*18|1|0.04|ENSG00000163781|chr3:133611043-133611044|-/AAAAGAGAATGTG|frameshift_variant;TOPBP1|p.R964Efs*12|1|0.19|ENSG00000163781|chr3:133624090-133624090|T/-|frameshift_variant	49.536043120802724	0.308405419312776	5				NaN	NaN	0	NaN	5685	3735	9421
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9423	28.404	NaN	3092.9	30	0	945.27	0.106			+	48071	VSSQLQDY	8	55	470.2254604832768	938.4363680333536	2	470.7279968261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSSQLQDY_	REV__ENSG00000213921|ENST00000638280|LEUTX;REV__nc|ENSG00000213921|A8MZ59-1|LEUTX	64.20726635412375	0.4601301477144759	5				NaN	NaN	0	NaN	5686	3735	9421
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9424	28.406	NaN	2038.9	30	0	293.64	0.034	+			13724	GQAEIIITK	9	53	486.7899255306906	NaN	0	486.7811584472656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GQAEIIITK_	ENSG00000174306|ENST00000683867|ZHX3;nc|ENSG00000174306|Q9H4I2-2|ZHX3;ZHX3|p.L445Sfs*3|1|0.19|ENSG00000174306|chr20:41203584-41203584|G/-|frameshift_variant	59.93077597824379	0.14961415694175798	5				NaN	NaN	0	NaN	5687	3735	9421
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9441	28.441	NaN	6384	30	0	1356.6	0.144	+			49206	VVMVNQGLTK	10	68	544.8114228664141	NaN	0	544.811279296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVMVNQGLTK_	ENSG00000134057|ENST00000256442|CCNB1	136.5150327860613	0.010481152786688456	5				NaN	NaN	0	NaN	5701	3738	9440
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9456	28.474	NaN	4403.4	30	0	1464.6	0.214	+			48837	VVAVGRAL	8	41	392.7555663376866	783.4965797421733	2	392.7558898925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVAVGRAL_	ENSG00000167986|ENST00000301764|DDB1;ENST00000414411.3_1_11:61081295-61081943:-|nuORF	83.28718786952967	0.2977916691876266	5				NaN	NaN	0	NaN	5713	3741	9455
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9457	28.478	NaN	1714.8	30	0	370.87	0.106	+			20903	KISTSCSVIP	10	41	517.7811041599673	1033.5476553867345	2	517.7808227539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KISTSCSVIP_	ANKRD12|p.D1018Rfs*2|1|0.34|ENSG00000101745|chr18:9256313-9256314|-/A|frameshift_variant;ANKRD12|p.D530Kfs*23|1|0.42|ENSG00000101745|chr18:9254849-9254850|-/AAGAT|frameshift_variant;ANKRD12|p.I1846*|1|0.43|ENSG00000101745|chr18:9258797-9258797|A/-|frameshift_variant;ANKRD12|p.K652Nfs*4|1|0.09|ENSG00000101745|chr18:9255217-9255217|A/-|frameshift_variant;ANKRD12|p.K983Nfs*4|1|0.36|ENSG00000101745|chr18:9256209-9256209|A/-|frameshift_variant;ANKRD12|p.L711Kfs*5|1|0.41|ENSG00000101745|chr18:9255395-9255396|TT/-|frameshift_variant;ANKRD12|p.N1526Kfs*7|2|0.18|ENSG00000101745|chr18:9257837-9257838|-/A|frameshift_variant;ANKRD12|p.S984Ifs*7|1|0.2|ENSG00000101745|chr18:9256208-9256209|-/A|frameshift_variant;ENSG00000101745|ENST00000262126|ANKRD12;nc|ENSG00000101745|Q6UB98-2|ANKRD12	30.317721548370564	0.6322445173429027	5				NaN	NaN	0	NaN	5714	3741	9455
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9458	28.48	NaN	1958.8	30	0	447.58	0.035	+			16618	HGTVVALRY	9	43	508.2875020329845	1014.560451132769	2	508.28863525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HGTVVALRY_	ENSG00000110013|ENST00000263593|SIAE;nc|ENSG00000110013|Q9HAT2-2|SIAE	49.44154591367651	0.3095138337212152	5				NaN	NaN	0	NaN	5715	3741	9455
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9475	28.515	NaN	30515	30	0	7301.4	0.214	+			4619	ATLNSIVAK	9	85	458.7766090143947	915.5386650955894	2	458.7765808105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATLNSIVAK_	ENSG00000007944|ENST00000356840|MYLIP;MYLIP|p.K199Rfs*26|1|0.07|ENSG00000007944|chr6:16143150-16143151|-/GAATT|frameshift_variant;MYLIP|p.R317Kfs*8|1|0.09|ENSG00000007944|chr6:16145014-16145015|-/A|frameshift_variant	136.98908636845044	0.011892605960677736	5				NaN	NaN	0	NaN	5729	3744	9474
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9476	28.518	NaN	11705	30	0	4209.6	0.106	+			5325	ATVLYIVKK	9	49	345.5583313988874	1033.6531647968623	3	345.5586242675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATVLYIVKK_	ENSG00000113734|ENST00000351486|BNIP1;nc|ENSG00000113734|Q12981-1|BNIP1;nc|ENSG00000113734|Q12981-2|BNIP1;nc|ENSG00000113734|Q12981-3|BNIP1	69.6276240434122	0.14239879520340665	5				NaN	NaN	0	NaN	5730	3744	9474
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9477	28.52	NaN	3338	30	0	1469	0.106	+			45978	VATEKAVEL	9	56	480.2736475700289	958.5327422068578	2	480.27386474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VATEKAVEL_	ENSG00000163931|ENST00000462138|TKT;ENST00000460243.1_1_3:53262881-53263452:-|nuORF;ENST00000460343.5_1_3:53261754-53265639:-|nuORF;ENST00000461139.5_1_3:53259774-53265639:-|nuORF;ENST00000469678.1_1_3:53259917-53265542:-|nuORF;nc|ENSG00000163931|P29401-2|TKT	47.95952297671804	0.32689736945648856	5				NaN	NaN	0	NaN	5731	3744	9474
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9478	28.522	NaN	1316.6	30	0	116.45	0.106	+			16387	HENIVIAKM	9	55	527.7890814502134	1053.5636099672267	2	527.7899780273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HENIVIAKM_	ENSG00000185624|ENST00000331483|P4HB	60.11826168202944	0.21262886028301267	5				NaN	NaN	0	NaN	5732	3744	9474
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9479	28.524	NaN	911.77	30	0	166.77	0.034				-1	TAGMDIFAK	9	37	485.23956298828125	NaN	0	485.23956298828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_TAGM(Oxidation (M))DIFAK_	ENSG00000169504|ENST00000374379|CLIC4;ENST00000601934.1_1_19:6563529-6563655:-|nuORF	27.882242232435846	0.3367954786602879	5				NaN	NaN	0	NaN	5733	3744	9474
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9512	28.595	NaN	1346	30	0	166.17	0.214	+			28194	NASKGIYAM	9	49	477.7387124212549	NaN	0	477.7384338378906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NASKGIYAM_	ENSG00000142945|ENST00000372224|KIF2C;nc|ENSG00000142945|Q99661-2|KIF2C	56.72105179125745	0.16330365735109603	5				NaN	NaN	0	NaN	5760	3750	9511
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9513	28.599	NaN	1079.6	30	0	172.88	0.106			+	24266	LEVKLKEN	8	51	486.7900695800781	NaN	0	486.7900695800781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LEVKLKEN_	REV__ENSG00000155827|ENST00000389120|RNF20	66.42927471994793	1.7418937515398478	5				NaN	NaN	0	NaN	5761	3750	9511
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9514	28.601	NaN	1098.6	30	0	156.67	0.106	+			25201	LMIWKLNV	8	49	508.8034362792969	NaN	0	508.8034362792969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LMIWKLNV_	ENST00000369577.7_1_6:87964485-87964521:+|nuORF	42.47446043378293	1.7418937515398478	5				NaN	NaN	0	NaN	5762	3750	9511
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9515	28.603	NaN	362.83	30	0	59.765	0.032			+	13097	GGAALSMR	8	29	381.70025634765625	NaN	0	381.70025634765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GGAALSMR_	REV__ENSG00000113430|ENST00000231357|IRX4;REV__nc|ENSG00000113430|P78413-2|IRX4	26.79610172149135	1.7418937515398478	5				NaN	NaN	0	NaN	5763	3750	9511
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9532	28.637	NaN	969.37	30	0	119.95	0.214	+			51176	YPGQPHPAL	9	44	490.2530584125519	NaN	0	490.2535095214844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YPGQPHPAL_	ENSG00000114315|ENST00000232424|HES1	57.81127852772723	0.15865383123342353	5				NaN	NaN	0	NaN	5777	3753	9531
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9533	28.641	NaN	1828.8	30	0	168.95	0.035	+			7781	DPEGSRITY	9	61	519.2483118056808	1036.4820706781616	2	519.2484130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DPEGSRITY_	ENSG00000124596|ENST00000424266|OARD1;ENST00000465893.1_1_6:41037763-41039373:-|nuORF	70.8162118820467	0.13725933411854815	5				NaN	NaN	0	NaN	5778	3753	9531
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9549	28.674	NaN	9829.7	30	0	3176.4	0.214	+			39007	SSSGFVAIK	9	64	448.2476010130003	894.4806490928006	2	448.2479553222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSSGFVAIK_	ENSG00000198478|ENST00000369838|SH3BGRL2;SH3BGRL2|p.P55Rfs*41|2|0.28|ENSG00000198478|chr6:79673727-79673727|C/-|frameshift_variant	176.08678752253132	0.0017279326439731339	5				NaN	NaN	0	NaN	5791	3756	9548
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9550	28.677	NaN	5948.7	30	0	1973.5	0.033	+			8046	DVAKLLLQ	8	46	450.28125591921344	898.5479589052269	2	450.2822570800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DVAKLLLQ_	ANK2|p.E1746*|1|0.07|ENSG00000145362|chr4:113353848-113353849|-/C|frameshift_variant;ANK2|p.N1476Mfs*12|1|0.21|ENSG00000145362|chr4:113350244-113350244|A/-|frameshift_variant;ANK2|p.R2581Efs*5|1|0.41|ENSG00000145362|chr4:113356352-113356353|-/A|frameshift_variant;ENSG00000145362|ENST00000357077|ANK2;nc|ENSG00000145362|Q01484-2|ANK2;nc|ENSG00000145362|Q01484-5|ANK2	37.15910966729921	0.6739408393984688	5				NaN	NaN	0	NaN	5792	3756	9548
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9565	28.708	NaN	4127.6	30	0	686.89	0.214			+	-1	DGIGLVLVC	9	62	473.2572230630928	944.4998931929856	2	473.2572021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_DGIGLVLVC(Carbamidomethyl (C))_	REV__ENSG00000172752|ENST00000373157|COL6A5;REV__nc|ENSG00000172752|A8TX70-2|COL6A5;REV__nc|ENSG00000172752|A8TX70|COL6A5	60.29395666154354	0.21116425950210296	5				NaN	NaN	0	NaN	5804	3759	9564
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9566	28.712	NaN	1468.1	30	0	258.2	0.034	+			1306	AESVVPARM	9	49	480.2530198875997	NaN	0	480.2528381347656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AESVVPARM_	ENSG00000167508|ENST00000301012|MVD;ENST00000565149.5_1_16:88718935-88722722:-|nuORF	58.78195531508484	0.1545138866451181	5				NaN	NaN	0	NaN	5805	3759	9564
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9583	28.746	NaN	8327.1	30	0	1637.2	0.214				-1	 	0	66	537.7763374823049	1073.5381220314098	2	537.7776489257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5819	3762	9582
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9584	28.75	NaN	3670.8	30	0	478.36	0.106	+			4096	ATDPNILGR	9	59	478.76153588126897	955.508518829338	2	478.7618408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATDPNILGR_	ENSG00000253729|ENST00000314191|PRKDC;ENST00000536483.1_1_8:48686736-48691238:-|nuORF;nc|ENSG00000253729|P78527-2|PRKDC	75.04331003522576	0.118981335847003	5				NaN	NaN	0	NaN	5820	3762	9582
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9585	28.752	NaN	1727.1	30	0	455.85	0.106	+			25912	LSGNEYVFT	9	55	515.2490830322904	1028.4836131313807	2	515.2490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSGNEYVFT_	ENSG00000113231|ENST00000264917|PDE8B;nc|ENSG00000284762|O95263-2|PDE8B;nc|ENSG00000284762|O95263-3|PDE8B;nc|ENSG00000284762|O95263-4|PDE8B;nc|ENSG00000284762|O95263-6|PDE8B	31.529811441608018	0.5085848003137583	5				NaN	NaN	0	NaN	5821	3762	9582
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9586	28.754	NaN	3810.9	30	0	520.24	0.033			+	26508	LTNIWGAV	8	62	437.2463174969011	NaN	0	437.2467956542969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LTNIWGAV_	REV__CNDP2|p.A143T|1|0.42|ENSG00000133313|chr18:74508899-74508899|G/A|missense_variant	71.37791200682192	1.7418937515398478	5				NaN	NaN	0	NaN	5822	3762	9582
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9604	28.791	NaN	8547.5	30	0	2222.5	0.214	+			40312	STSSVIMMK	9	56	492.24801670993855	982.4814804866771	2	492.2483825683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STSSVIMMK_	ENST00000521804.1_1_8:142264568-142318349:-|nuORF	180.92599232761785	0.0012030822705978085	5				NaN	NaN	0	NaN	5837	3765	9603
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9605	28.794	NaN	10339	30	0	1577	0.106	+			42736	TDISINVI	8	73	437.74742060312207	873.4802882730442	2	437.7476806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TDISINVI_	OR2S2|p.A191T|1|0.1|ENSG00000278889|chr9:35957528-35957528|C/T|missense_variant	108.08749611321984	0.24621691167378246	5				NaN	NaN	0	NaN	5838	3765	9603
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9606	28.796	NaN	1900.7	30	0	542.77	0.034	+			37268	SLAETVHCD	9	51	487.7156129988616	973.4166730645233	2	487.7169494628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLAETVHCD_	ENG|p.G400Vfs*21|1|0.34|ENSG00000106991|chr9:127819973-127819973|C/-|frameshift_variant;ENG|p.N286Tfs*73|1|0.3|ENSG00000106991|chr9:127824934-127824934|T/-|frameshift_variant;ENG|p.R93Efs*9|1|0.16|ENSG00000106991|chr9:127829770-127829770|G/-|frameshift_variant;ENG|p.Y258Lfs*76|1|0.4|ENSG00000106991|chr9:127825275-127825276|-/G|frameshift_variant;ENSG00000106991|ENST00000373203|ENG;nc|ENSG00000106991|P17813-2|ENG	23.04248740728303	0.5879033540491928	5				NaN	NaN	0	NaN	5839	3765	9603
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9624	28.834	NaN	7927.8	30	0	2049.8	0.214	+			23715	LAVDKSASL	9	67	452.2606985241778	902.5068441151557	2	452.2607116699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LAVDKSASL_	ENSG00000065526|ENST00000375759|SPEN;SPEN|p.A2105Lfs*33|1|0.46|ENSG00000065526|chr1:15932548-15932548|G/-|frameshift_variant;SPEN|p.A2251Qfs*102|3|0.29|ENSG00000065526|chr1:15932985-15932985|C/-|frameshift_variant	93.1432384553994	0.056003526918089595	5				NaN	NaN	0	NaN	5854	3768	9623
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9625	28.837	NaN	2203	30	0	589.74	0.106	+			7180	DAGPPTHAF	9	53	456.7140725262984	911.4135921193969	2	456.7135314941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DAGPPTHAF_	ENSG00000139946|ENST00000267460|PELI2;ENSG00000197329|ENST00000358912|PELI1	79.45101966838831	0.09992237243120712	5				NaN	NaN	0	NaN	5855	3768	9623
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9626	28.839	NaN	2004.6	30	0	528.92	0.034	+			30258	PTAPLPAEPA	10	47	482.2607640714084	962.5069752096168	2	482.26104736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PTAPLPAEPA_	ENSG00000088808|ENST00000202556|PPP1R13B;ENST00000555391.5_1_14:104201493-104210315:-|nuORF	34.172542307311794	0.6007644933930345	5				NaN	NaN	0	NaN	5856	3768	9623
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9644	28.877	NaN	2469.6	30	0	274.44	0.214	+			36204	SELLTKLQ	8	59	466.2766418457031	NaN	0	466.2766418457031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SELLTKLQ_	ENSG00000170703|ENST00000393382|TTLL6;nc|ENSG00000170703|Q8N841-2|TTLL6;nc|ENSG00000170703|Q8N841-3|TTLL6	60.11826168202944	1.7418937515398478	5				NaN	NaN	0	NaN	5871	3771	9643
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9645	28.88	NaN	1140.9	30	0	265.34	0.106	+			3185	ASKIEALHK	9	23	332.8660566675263	NaN	0	332.8660583496094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASKIEALHK_	ENSG00000101972|ENST00000371145|STAG2;nc|ENSG00000101972|Q8N3U4|STAG2;STAG2|p.T1208Kfs*3|1|0.87|ENSG00000101972|chrX:124095400-124095400|C/-|frameshift_variant	19.996771675451527	0.3693019437812985	5				NaN	NaN	0	NaN	5872	3771	9643
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9646	28.882	NaN	1957.3	30	0	519.48	0.033	+			41807	SVSRTPTI	8	48	430.74519462066445	859.4758363081289	2	430.7456970214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVSRTPTI_	ENSG00000114656|ENST00000645291|CFAP92;nc|ENSG00000114656|Q9ULG3-2|CFAP92;nc|ENSG00000114656|Q9ULG3|CFAP92	34.172542307311794	0.6954784234644539	5				NaN	NaN	0	NaN	5873	3771	9643
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9664	28.92	NaN	4213.9	30	0	677.25	0.215	+			45819	VAIKAGTTL	9	59	437.27364593515097	872.532738937102	2	437.2737121582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VAIKAGTTL_	ENSG00000166471|ENST00000528080|TMEM41B;ENST00000524543.5_1_11:9304973-9316821:-|nuORF;ENST00000533867.1_1_11:9304973-9309374:-|nuORF	77.31757898189308	0.1091473830098891	5				NaN	NaN	0	NaN	5888	3774	9663
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9665	28.923	NaN	3637.7	30	0	625.92	0.106	+			47645	VSCALSLSR	9	56	468.2526892164804	934.4908254997608	2	468.2524108886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSCALSLSR_	ENSG00000149380|ENST00000331597|P4HA3;ENST00000525968.1_1_11:73984627-74015361:-|nuORF;nc|ENSG00000149380|Q7Z4N8-2|P4HA3;nc|ENSG00000149380|Q7Z4N8-3|P4HA3	148.98678547993487	0.0071052929883181565	5				NaN	NaN	0	NaN	5889	3774	9663
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9666	28.925	NaN	2392.8	30	0	167.04	0.034	+			25827	LSDMLQQL	8	55	474.24738612458214	NaN	0	474.24676513671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSDMLQQL_	ENSG00000166851|ENST00000300093|PLK1;ENST00000562272.5_1_16:23691188-23701381:+|nuORF;ENST00000562407.1_1_16:23695226-23699079:+|nuORF;PLK1|p.Y481Ffs*7|1|0.25|ENSG00000166851|chr16:23689508-23689509|-/TT|frameshift_variant	76.7741389293348	1.7418937515398478	5				NaN	NaN	0	NaN	5890	3774	9663
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9684	28.963	NaN	7163	30	0	3099.3	0.214	+			46387	VELGTQPAT	9	69	458.24275437133684	914.4709558094737	2	458.2428283691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VELGTQPAT_	ENSG00000158874|ENST00000367990|APOA2	117.81106730687013	0.02252488733980868	5				NaN	NaN	0	NaN	5905	3777	9683
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9685	28.967	NaN	6644.5	30	0	1895.1	0.106	+			7581	DILFAFTA	8	59	449.2386643934334	896.4627758536668	2	449.2393493652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DILFAFTA_	ENSG00000168356|ENST00000302328|SCN11A;nc|ENSG00000168356|Q9UI33-3|SCN11A	55.50420428727701	0.5462892107279674	5				NaN	NaN	0	NaN	5906	3777	9683
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9686	28.969	NaN	1562.6	30	0	269.39	0.106	+			29232	NVYEVVNPK	9	50	531.285185623603	1060.5558183140058	2	531.2858276367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NVYEVVNPK_	ENSG00000139117|ENST00000331366|CPNE8	78.26377905018397	0.10505600812668463	5				NaN	NaN	0	NaN	5907	3777	9683
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9687	28.97	NaN	1665.4	30	0	142.15	0.035	+			21570	KPELPKKPN	9	58	525.8199650974037	NaN	0	525.8198852539062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KPELPKKPN_	ENSG00000109686|ENST00000604030|SH3D19;nc|ENSG00000109686|Q5HYK7-2|SH3D19;nc|ENSG00000109686|Q5HYK7-3|SH3D19;nc|ENSG00000109686|Q5HYK7|SH3D19	53.08895987439943	0.18540527177656715	5				NaN	NaN	0	NaN	5908	3777	9683
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9705	29.008	NaN	4891.8	30	0	1281.3	0.214	+			44820	TTSNFTFSK	9	60	516.754291079648	NaN	0	516.7543334960938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTSNFTFSK_	ENSG00000160294|ENST00000291688|MCM3AP;MCM3AP|p.K492Efs*5|1|0.29|ENSG00000160294|chr21:46280545-46280546|-/C|frameshift_variant	91.26522074875469	0.03904588892501484	5				NaN	NaN	0	NaN	5923	3780	9704
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9706	29.012	NaN	1512.7	30	0	494.91	0.106	+			30908	QEKVSDYEM	9	49	564.748084285902	1127.481615638604	2	564.7489624023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QEKVSDYEM_	ENSG00000132646|ENST00000379143|PCNA	44.377184641726394	0.36891676396732553	5				NaN	NaN	0	NaN	5924	3780	9704
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9707	29.014	NaN	1185.4	30	0	91.037	0.106			+	-1	KTIVCGDR	8	54	474.7488098144531	NaN	0	474.7488098144531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_KTIVC(Carbamidomethyl (C))GDR_	REV__ENSG00000132846|ENST00000255198|ZBED3	32.81241826257853	1.7418937515398478	5				NaN	NaN	0	NaN	5925	3780	9704
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9708	29.015	NaN	954.13	30	0	93.616	0.036			+	-1	KMTIRSMKG	9	52	534.2869320637224	1066.5593111942446	2	534.2880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_KM(Oxidation (M))TIRSMKG_	REV__nc|ENSG00000168092|P68402-4|PAFAH1B2	40.77816245573522	0.41113185337114944	5				NaN	NaN	0	NaN	5926	3780	9704
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9740	29.085	NaN	1385.4	30	0	213.33	0.143	+			32274	QTLYLRKA	8	50	496.79859109109685	991.5826292489937	2	496.7988586425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QTLYLRKA_	ENST00000222120.7_1_19:11435272-11435518:-|nuORF	38.80614096846853	0.6637206697844082	5				NaN	NaN	0	NaN	5952	3786	9739
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9750	29.109	NaN	1851.1	30	0	220.06	0.214	+			20439	KEVAELTRL	9	52	529.8139775563585	1057.613402179517	2	529.8148803710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEVAELTRL_	ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1	72.2432373244024	0.13108886737667413	5				NaN	NaN	0	NaN	5959	3789	9749
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9751	29.113	NaN	1457.4	30	0	218.11	0.106	+			47629	VSAPNIAMK	9	50	465.757611901064	929.5006708689281	2	465.75799560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSAPNIAMK_	ENSG00000126883|ENST00000359428|NUP214;nc|ENSG00000126883|P35658-2|NUP214;nc|ENSG00000126883|P35658-3|NUP214;nc|ENSG00000126883|P35658-4|NUP214;nc|ENSG00000126883|P35658-5|NUP214;NUP214|p.P1285Rfs*3|1|0.28|ENSG00000126883|chr9:131197346-131197359|CCCAGGAGAACCTG/-|frameshift_variant	53.351449002276354	0.2690372970092375	5				NaN	NaN	0	NaN	5960	3789	9749
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9752	29.115	NaN	1208.3	30	0	112.83	0.034	+			33823	RQTGLLDPG	9	50	478.76153588126897	955.508518829338	2	478.76190185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RQTGLLDPG_	ENSG00000177463|ENST00000425241|NR2C2;ENST00000475707.5_1_3:15045421-15079667:+|nuORF;nc|ENSG00000177463|P49116-2|NR2C2;NR2C2|p.F563Lfs*10|1|0.4|ENSG00000177463|chr3:15042899-15042899|T/-|frameshift_variant	47.657333605630114	0.33044192980041115	5				NaN	NaN	0	NaN	5961	3789	9749
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9763	29.138	NaN	5876	30	0	1803.5	0.214	+			39897	STLSTVISK	9	62	468.2743790980387	934.5342052628774	2	468.27435302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STLSTVISK_	ENSG00000174197|ENST00000703841|MGA;MGA|p.D2578Rfs*45|1|0.32|ENSG00000174197|chr15:41762342-41762343|-/A|frameshift_variant;MGA|p.S2228Kfs*5|1|0.33|ENSG00000174197|chr15:41750284-41750285|-/A|frameshift_variant;MGA|p.T1916Qfs*7|1|0.4|ENSG00000174197|chr15:41749350-41749350|A/-|frameshift_variant	104.01359247289065	0.03510646158778409	5				NaN	NaN	0	NaN	5969	3792	9762
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9764	29.142	NaN	4114.9	30	0	411.19	0.106	+			36183	SELITKAV	8	53	430.75812370488995	859.5016944765799	2	430.7583923339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SELITKAV_	ENSG00000124575|ENST00000244534|H1-3;ENSG00000168298|ENST00000304218|H1-4;ENSG00000184357|ENST00000331442|H1-5;ENSG00000187837|ENST00000343677|H1-2	69.6276240434122	0.4100012001731381	5				NaN	NaN	0	NaN	5970	3792	9762
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9765	29.144	NaN	3817.2	30	0	1193.5	0.033	+			3309	ASLTAALAK	9	55	423.25827859644374	844.5020042596875	2	423.2582702636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASLTAALAK_	ENSG00000197892|ENST00000524189|KIF13B;nc|ENSG00000197892|Q9NQT8-2|KIF13B	104.0567914643314	0.03506238181059741	5				NaN	NaN	0	NaN	5971	3792	9762
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9777	29.169	NaN	1324.6	30	0	342.75	0.145				-1	GRNVENMKILC	11	41	646.827880859375	NaN	0	646.827880859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_GRNVENM(Oxidation (M))KILC_	AGPAT1|p.R70C|1|0.13|ENSG00000204310|chr6:32171063-32171063|G/A|missense_variant	14.137123925751023	0.456735970842152	5				NaN	NaN	0	NaN	5980	3795	9776
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9794	29.206	NaN	1890.2	30	0	338.47	0.214			+	703	AEAPLTPSLV	10	49	499.2827166028876	996.5508802725752	2	499.2822570800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEAPLTPSLV_	REV__ENSG00000272886|ENST00000610213|DCP1A;REV__nc|ENSG00000272886|Q9NPI6-2|DCP1A	38.753607047826485	0.5606299674732264	5				NaN	NaN	0	NaN	5994	3798	9793
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9795	29.209	NaN	1039	30	0	383.72	0.106			+	-1	TLQSTQLCF	9	46	549.2681274414062	NaN	0	549.2681274414062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_TLQSTQLC(Carbamidomethyl (C))F_	REV__ENST00000557925.1_1_19:8315741-8320784:+|nuORF	29.14955571784316	0.3303970763161698	5				NaN	NaN	0	NaN	5995	3798	9793
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9796	29.211	NaN	1892.4	30	0	373.89	0.106	+			45804	VAIDAKVPI	9	48	463.2893301991025	924.564107465005	2	463.29034423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VAIDAKVPI_	ENSG00000167904|ENST00000434581|TMEM68	35.61828744233558	0.47037581924408073	5				NaN	NaN	0	NaN	5996	3798	9793
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9797	29.213	NaN	1441.2	30	0	307.57	0.034			+	3686	ASYVVGQFA	9	47	471.24186063188824	940.4691683305765	2	471.24212646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASYVVGQFA_	REV__ENSG00000143147|ENST00000682931|GPR161;REV__ENST00000493800.1_1_1:168059784-168074118:-|nuORF;REV__nc|ENSG00000143147|Q8N6U8-2|GPR161;REV__nc|ENSG00000143147|Q8N6U8-3|GPR161;REV__nc|ENSG00000143147|Q8N6U8-4|GPR161;REV__nc|ENSG00000143147|Q8N6U8-5|GPR161;REV__nc|ENSG00000143147|Q8N6U8-6|GPR161	35.61828744233558	0.47037581924408073	5				NaN	NaN	0	NaN	5997	3798	9793
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9815	29.25	NaN	19128	30	0	6572.4	0.214	+			40670	SVASISLTK	9	61	453.26825651935235	904.5219601055047	2	453.2691345214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVASISLTK_	ENST00000298289.6_1_14:50085755-50087389:-|nuORF	204.624747049445	1.3753862112523631E-05	5				NaN	NaN	0	NaN	6012	3801	9814
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9816	29.254	NaN	1479	30	0	243.95	0.106	+			47757	VSGPTLLAK	9	45	443.27351470897764	884.5324764847553	2	443.274169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSGPTLLAK_	ENSG00000126790|ENST00000247194|L3HYPDH;ENST00000527981.1_1_14:59950407-59951094:-|nuORF	45.97224482568171	0.3502073465782774	5				NaN	NaN	0	NaN	6013	3801	9814
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9817	29.256	NaN	1305.8	30	0	144.36	0.106	+			12531	GEFKNGNF	8	48	456.7140725262984	911.4135921193969	2	456.71368408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEFKNGNF_	ENSG00000182050|ENST00000611864|MGAT4C;nc|ENSG00000182050|Q9UBM8-2|MGAT4C	30.503639358989545	0.7238069182250283	5				NaN	NaN	0	NaN	6014	3801	9814
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9818	29.258	NaN	1035.6	30	0	236	0.106				-1	MMGRKMEIC	9	37	557.7468773797635	1113.479201826327	2	557.7478637695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_MMGRKM(Oxidation (M))EIC_	TP53BP1|p.P421Lfs*65|1|0.18|ENSG00000067369|chr15:43469970-43469970|G/-|frameshift_variant	27.882242232435846	0.5426732730940306	5				NaN	NaN	0	NaN	6015	3801	9814
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9819	29.26	NaN	900.41	30	0	173.21	0.033	+			2591	AQGAVFLGK	9	36	445.7585289450779	889.5025049569558	2	445.7593688964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AQGAVFLGK_	ENSG00000073803|ENST00000265026|MAP3K13;ENST00000433092.5_1_3:185155245-185169222:+|nuORF;ENST00000477582.1_1_3:185155245-185161425:+|nuORF;MAP3K13|p.P645Lfs*19|1|0.35|ENSG00000073803|chr3:185473261-185473261|C/-|frameshift_variant;MAP3K13|p.V334Lfs*14|1|0.29|ENSG00000073803|chr3:185447932-185447932|A/-|frameshift_variant;nc|ENSG00000073803|O43283-4|MAP3K13	44.116797842482775	0.37197099687881774	5				NaN	NaN	0	NaN	6016	3801	9814
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9836	29.294	NaN	2863	30	0	474.45	0.214	+			46280	VEIAAKNL	8	42	429.2579468184013	856.5013407036026	2	429.2580261230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VEIAAKNL_	ENSG00000161533|ENST00000293217|ACOX1;nc|ENSG00000161533|Q15067-3|ACOX1;nc|ENSG00000161533|Q15067|ACOX1	93.19546047674547	0.2677966331495483	5				NaN	NaN	0	NaN	6030	3804	9835
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9837	29.298	NaN	3595.6	30	0	1073	0.106	+			19361	KALDFIASK	9	63	496.7922340207089	991.5699151082179	2	496.79266357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KALDFIASK_	ACTN1|p.N119Efs*3|1|0.38|ENSG00000072110|chr14:68912228-68912229|-/TC|frameshift_variant;ENSG00000072110|ENST00000394419|ACTN1;ENSG00000130402|ENST00000252699|ACTN4;ENSG00000248746|ENST00000513398|ACTN3;ENST00000502692.5_1_11:66313918-66328094:+|nuORF;ENST00000513398.1_1_11:66314411-66328094:+|nuORF;ENST00000588618.5_1_19:39138385-39212431:+|nuORF;nc|ENSG00000072110|P12814-2|ACTN1;nc|ENSG00000072110|P12814-4|ACTN1;nc|ENSG00000072110|P12814|ACTN1	109.82975700811294	0.02917171107062681	5				NaN	NaN	0	NaN	6031	3804	9835
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9838	29.3	NaN	1431.6	30	0	153.48	0.035			+	23790	LCLSRVIDE	9	55	524.2784026304741	1046.5422523277482	2	524.2794189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LCLSRVIDE_	REV__ENSG00000123901|ENST00000243673|GPR83;REV__nc|ENSG00000123901|Q9NYM4-2|GPR83	44.116797842482775	0.37197099687881774	5				NaN	NaN	0	NaN	6032	3804	9835
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9855	29.335	NaN	2847.8	30	0	1312.4	0.214			+	9826	EPHPGPDSL	9	43	474.72431229366674	947.4340716541335	2	474.72418212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EPHPGPDSL_	REV__ENSG00000090020|ENST00000263980|SLC9A1;REV__ENST00000374089.5_1_1:27426800-27429818:-|nuORF	55.50420428727701	0.2510918378945873	5				NaN	NaN	0	NaN	6046	3807	9854
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9856	29.338	NaN	1829.2	30	0	688.56	0.106			+	42505	TAPAAAAPAAV	11	56	455.7527770996094	NaN	0	455.7527770996094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAPAAAAPAAV_	REV__ENST00000181839.8_1_7:39990221-39990641:+|nuORF	34.172542307311794	0.4131234684587831	5				NaN	NaN	0	NaN	6047	3807	9854
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9857	29.34	NaN	1547.2	30	0	196.91	0.034			+	8999	EFWQTSAV	8	56	484.2301840958635	NaN	0	484.2301940917969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EFWQTSAV_	REV__tr|U7SP94|U7SP94_FUSNUAdenylosuccinatelyaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01775PE=3SV=1	39.252832667884924	1.7418937515398478	5				NaN	NaN	0	NaN	6048	3807	9854
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9875	29.378	NaN	1396.4	30	0	280.04	0.142			+	47292	VNGPLNEAY	9	46	488.73984006915197	NaN	0	488.7400817871094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VNGPLNEAY_	REV__ENSG00000167615|ENST00000326764|LENG8;REV__nc|ENSG00000167615|Q96PV6-1|LENG8	35.61828744233558	0.29773779453147337	5				NaN	NaN	0	NaN	6063	3810	9874
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9892	29.414	NaN	1503.4	30	0	121.34	0.143			+	30164	PSFLPGETAP	10	53	508.2585045814185	1014.502456229637	2	508.2590637207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PSFLPGETAP_	REV__ENSG00000178950|ENST00000314167|GAK;REV__ENST00000509566.1_1_4:844107-866085:-|nuORF;REV__GAK|p.P1133Lfs*23|1|0.3|ENSG00000178950|chr4:851860-851860|G/-|frameshift_variant;REV__nc|ENSG00000178950|O14976-2|GAK	40.77816245573522	0.5419747034533848	5				NaN	NaN	0	NaN	6077	3813	9891
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9910	29.453	NaN	44863	30	0	19165	0.215	+			30343	PTTPVLTRNAY	11	79	411.55912287889197	1231.655539236876	3	411.5592041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PTTPVLTRNAY_	ENSG00000114541|ENST00000398540|FRMD4B;nc|ENSG00000114541|Q9Y2L6-2|FRMD4B	23.52269567125451	0.7430573033454468	5				NaN	NaN	0	NaN	6092	3816	9909
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9911	29.457	NaN	8195.3	30	0	2127.6	0.106	+			29084	NTMNITISK	9	64	511.27029739286115	1020.5260418525223	2	511.2710876464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NTMNITISK_	ENSG00000129003|ENST00000644861|VPS13C;nc|ENSG00000129003|Q709C8-2|VPS13C;nc|ENSG00000129003|Q709C8-3|VPS13C;nc|ENSG00000129003|Q709C8-4|VPS13C;VPS13C|p.E2463Nfs*18|1|0.25|ENSG00000129003|chr15:61920157-61920157|C/-|frameshift_variant;VPS13C|p.N3163Sfs*6|1|0.05|ENSG00000129003|chr15:61882732-61882733|-/TTATCATCAC|frameshift_variant;VPS13C|p.P3597Lfs*3|1|0.26|ENSG00000129003|chr15:61868732-61868732|G/-|frameshift_variant	120.27252224102466	0.02103478360410217	5				NaN	NaN	0	NaN	6093	3816	9909
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9912	29.459	NaN	2079.8	30	0	672.28	0.106	+			47440	VPTDEARAF	9	53	503.2540398049855	1004.493526676771	2	503.2539367675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VPTDEARAF_	ENSG00000103769|ENST00000261890|RAB11A;ENSG00000185236|ENST00000328024|RAB11B;nc|ENSG00000103769|P62491-2|RAB11A;nc|ENSG00000185236|Q15907-2|RAB11B	62.107414245175825	0.1960472003779324	5				NaN	NaN	0	NaN	6094	3816	9909
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9913	29.46	NaN	5718.9	30	0	1945.3	0.106	+			45034	TVGDVLEAK	9	61	466.25810854768565	930.5016641621713	2	466.25799560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TVGDVLEAK_	ENSG00000106348|ENST00000338791|IMPDH1;ENST00000418838.1_1_X:40219448-40219874:-|nuORF;ENST00000440965.1_1_2:202003207-202003609:-|nuORF;IMPDH1|p.A247Gfs*7|1|0.06|ENSG00000106348|chr7:128398490-128398491|-/C|frameshift_variant;nc|ENSG00000106348|P20839-2|IMPDH1;nc|ENSG00000106348|P20839-3|IMPDH1;nc|ENSG00000106348|P20839-4|IMPDH1;nc|ENSG00000106348|P20839-5|IMPDH1;nc|ENSG00000106348|P20839-7|IMPDH1;nc|ENSG00000106348|P20839|IMPDH1	98.58198989935565	0.04066992115528678	5				NaN	NaN	0	NaN	6095	3816	9909
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9914	29.462	NaN	1282.2	30	0	170.69	0.033			+	-1	ISSILMLP	8	46	445.25823974609375	NaN	0	445.25823974609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_ISSILM(Oxidation (M))LP_	REV__tr|U7SJQ7|U7SJQ7_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02056PE=4SV=1	54.76467175910256	1.7418937515398478	5				NaN	NaN	0	NaN	6096	3816	9909
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9932	29.5	NaN	9327.1	30	0	4029.3	0.214	+			14849	GTLMWHQMK	9	42	377.8525227452401	1130.5357388359203	3	377.85247802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTLMWHQMK_	ENST00000346169.6_1_3:184032401-184033585:+|nuORF;ENST00000352767.7_2_3:184032446-184033585:+|nuORF	31.954861631926434	0.5046124803899898	5				NaN	NaN	0	NaN	6111	3819	9931
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9933	29.503	NaN	1404	30	0	162.65	0.034	+			38842	SSNLFVTGK	9	50	476.75791532271506	951.5012777122301	2	476.7578430175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSNLFVTGK_	ENST00000451596.2_1_9:74929993-74930062:+|nuORF	94.4091291819064	0.0524345700464502	5				NaN	NaN	0	NaN	6112	3819	9931
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9950	29.538	NaN	1403.9	30	0	737.43	0.142	+			22089	KSLWTKSS	8	41	468.7611531648534	935.5077533965068	2	468.76031494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSLWTKSS_	ENSG00000155008|ENST00000373173|APOOL	30.503639358989545	0.7238069182250283	5				NaN	NaN	0	NaN	6126	3822	9949
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9966	29.573	NaN	7142.7	30	0	1831.1	0.214	+			28441	NEVPVKEL	8	61	464.2607906349863	926.5070283367726	2	464.26055908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NEVPVKEL_	ENSG00000108829|ENST00000225972|LRRC59	90.36981228632155	0.27635063874291205	5				NaN	NaN	0	NaN	6139	3825	9965
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9967	29.577	NaN	1903.6	30	0	458.45	0.035				-1	GVCSTLTIK	9	46	489.7673739109382	977.5201948886764	2	489.767822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GVC(Carbamidomethyl (C))STLTIK_	ENST00000589011.1_1_7:20201474-20224697:-|nuORF	37.81151784470057	0.4459294069877048	5				NaN	NaN	0	NaN	6140	3825	9965
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9985	29.614	NaN	2119	30	0	473.17	0.213			+	28182	NAPRPRYMPT	10	64	601.8064543463744	1201.5983557595487	2	601.807373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAPRPRYMPT_	REV__ENSG00000062038|ENST00000264012|CDH3;REV__ENST00000542274.5_1_16:68679206-68732300:+|nuORF;REV__ENST00000567674.1_1_16:68721613-68732300:+|nuORF;REV__nc|ENSG00000062038|P22223-2|CDH3	47.657333605630114	0.47858658696240314	5				NaN	NaN	0	NaN	6155	3828	9984
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9986	29.617	NaN	897.98	30	0	176	0.034	+			40671	SVASISLTK	9	36	453.26825651935235	904.5219601055047	2	453.2691650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVASISLTK_	ENST00000298289.6_1_14:50085755-50087389:-|nuORF	39.252832667884924	0.4290233611298554	5				NaN	NaN	0	NaN	6156	3828	9984
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10004	29.654	NaN	2726.9	30	0	401.69	0.145	+			16373	HENEDIYKL	9	62	580.7833798226214	1159.5522067120428	2	580.7838134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HENEDIYKL_	ENSG00000102753|ENST00000261667|KPNA3;ENSG00000186432|ENST00000334256|KPNA4	99.01295224348159	0.040209060045561164	5				NaN	NaN	0	NaN	6171	3831	10003
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10021	29.69	NaN	2234	30	0	351.14	0.214	+			17719	IENGKVVSI	9	53	479.7822386923151	957.5499244514302	2	479.7822570800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IENGKVVSI_	ENSG00000176658|ENST00000318217|MYO1D	78.26377905018397	0.10505600812668463	5				NaN	NaN	0	NaN	6185	3834	10020
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10022	29.694	NaN	1540.8	30	0	251.21	0.106	+			47494	VQGVISVPK	9	46	463.78732997883253	925.5601070244651	2	463.78729248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VQGVISVPK_	ENSG00000168237|ENST00000436784|GLYCTK;nc|ENSG00000168237|Q8IVS8-2|GLYCTK;nc|ENSG00000168237|Q8IVS8-3|GLYCTK;nc|ENSG00000168237|Q8IVS8-4|GLYCTK;nc|ENSG00000168237|Q8IVS8-7|GLYCTK	39.252832667884924	0.4290233611298554	5				NaN	NaN	0	NaN	6186	3834	10020
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10023	29.696	NaN	794.82	30	0	159.61	0.106	+			23725	LAVFLPAL	8	33	422.268818120022	NaN	0	422.2688293457031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LAVFLPAL_	ENST00000486538.1_1_3:121213416-121213641:+|nuORF	24.504012794735996	1.7418937515398478	5				NaN	NaN	0	NaN	6187	3834	10020
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10024	29.698	NaN	1414.2	30	0	548.37	0.035			+	39168	SSYATLCEK	9	53	501.23418056632295	1000.4538081994459	2	501.2340393066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSYATLCEK_	REV__ENST00000495428.5_1_3:28333426-28360268:+|nuORF	37.81151784470057	0.4459294069877048	5				NaN	NaN	0	NaN	6188	3834	10020
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10036	29.723	NaN	2307.2	30	0	328.64	0.214	+			50411	YAAQASQAL	9	48	461.73523164684633	921.4559103604927	2	461.7351989746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YAAQASQAL_	ENSG00000118705|ENST00000237530|RPN2;ENST00000462163.1_1_20:35807747-35832332:+|nuORF;RPN2|p.G196Afs*41|1|0.12|ENSG00000118705|chr20:37204794-37204794|G/-|frameshift_variant	95.81516180277367	0.04847050768394289	5				NaN	NaN	0	NaN	6197	3837	10035
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10037	29.727	NaN	666.52	30	0	77.572	0.106				-1	GNGTWCTDL	9	45	533.2203027919942	1064.4260526507883	2	533.22119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))GNGTWC(Carbamidomethyl (C))TDL_	ENST00000483495.5_1_20:34219680-34219898:-|nuORF	29.14955571784316	0.5308295550522326	5				NaN	NaN	0	NaN	6198	3837	10035
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10038	29.729	NaN	853.28	30	0	180.55	0.034			+	8523	EATYIQKL	8	49	483.268798828125	NaN	0	483.268798828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EATYIQKL_	REV__ENSG00000198887|ENST00000361138|SMC5;REV__SMC5|p.F947Lfs*40|1|0.1|ENSG00000198887|chr9:70347984-70347984|T/-|frameshift_variant	19.996771675451527	1.7418937515398478	5				NaN	NaN	0	NaN	6199	3837	10035
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10054	29.762	NaN	18012	30	0	7045.9	0.214				-1	 	0	56	439.260401141151	876.5062493491021	2	439.2608642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6212	3840	10053
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10055	29.766	NaN	1377.1	30	0	222.51	0.106	+			12553	GEGHFGKVEL	10	51	536.7744223584145	1071.534291783629	2	536.7756958007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEGHFGKVEL_	ENSG00000162434|ENST00000342505|JAK1;ENST00000481702.1_1_1:65305238-65306936:-|nuORF	70.8162118820467	0.27065172005956	5				NaN	NaN	0	NaN	6213	3840	10053
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10056	29.768	NaN	741.36	30	0	96.183	0.035				-1	CWVILPCV	8	37	523.7621219253183	1045.5096909174365	2	523.7626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))WVILPC(Carbamidomethyl (C))V_	ENST00000420940.6_1_3:39137751-39138060:+|nuORF	16.704963439144045	0.7946246187734944	5				NaN	NaN	0	NaN	6214	3840	10053
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10088	29.837	NaN	3577.5	30	0	559.49	0.214	+			11132	FGADARAL	8	50	410.71895176536907	819.4233505975382	2	410.7192687988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FGADARAL_	ENSG00000144381|ENST00000388968|HSPD1;ENST00000461097.1_1_2:198361816-198363572:-|nuORF;ENST00000476746.5_1_2:198360008-198364584:-|nuORF;HSPD1|p.G441Vfs*14|1|0.04|ENSG00000144381|chr2:197488385-197488385|C/-|frameshift_variant;nc|ENSG00000144381|P10809-2|HSPD1	76.7741389293348	0.3504530765139327	5				NaN	NaN	0	NaN	6240	3846	10087
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10089	29.841	NaN	771.61	30	0	104.34	0.033			+	31139	QGEPPKLP	8	39	433.2422501208623	864.4699473085246	2	433.24267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QGEPPKLP_	REV__ENSG00000102870|ENST00000262525|ZNF629	35.61828744233558	0.6843154725607303	5				NaN	NaN	0	NaN	6241	3846	10087
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10100	29.864	NaN	2463.3	30	0	425.3	0.143	+			6109	AVNNMFVSK	9	60	505.26023126334013	1008.5059095934803	2	505.2605895996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVNNMFVSK_	ENSG00000100744|ENST00000555181|GSKIP	112.41091882917199	0.026537921851008135	5				NaN	NaN	0	NaN	6249	3849	10099
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10115	29.897	NaN	4607.3	30	0	974.39	0.214	+			16224	HEDLGHVAL	9	59	495.75389576464835	989.4932385960967	2	495.7532958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HEDLGHVAL_	ENSG00000128731|ENST00000261609|HERC2;ENST00000428453.5_1_15:20588586-20667676:-|nuORF;ENST00000430598.5_1_15:20613931-20667676:-|nuORF;ENST00000524476.5_1_15:28882105-28886289:+|nuORF;ENST00000529353.1_1_15:28878360-28886587:+|nuORF;ENST00000529624.5_3_15:28877823-28916776:+|nuORF;ENST00000562687.6_3_16:32769598-32772029:+|nuORF;HERC2|p.G2202Afs*8|1|0.2|ENSG00000128731|chr15:28213923-28213923|C/-|frameshift_variant;HERC2|p.K1446R|1|0.36|ENSG00000128731|chr15:28233678-28233678|T/C|missense_variant;nc|ENSG00000290376|Q9BVR0|HERC2P3	76.84663266511073	0.11118375776443899	5				NaN	NaN	0	NaN	6261	3852	10114
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10116	29.901	NaN	1436.5	30	0	288.43	0.034			+	37691	SLSIMLGKQ	9	37	488.7766672337512	NaN	0	488.7768859863281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLSIMLGKQ_	REV__ENSG00000116748|ENST00000520113|AMPD1;REV__nc|ENSG00000116748|P23109-2|AMPD1	40.77816245573522	0.2702456086868081	5				NaN	NaN	0	NaN	6262	3852	10114
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10146	29.967	NaN	6978.9	30	0	1493.5	0.214	+			17220	HVIETLIGK	9	74	505.30574825485587	1008.5969435765118	2	505.3059997558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HVIETLIGK_	ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5	115.49404669440601	0.023927554121326553	5				NaN	NaN	0	NaN	6286	3858	10145
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10147	29.97	NaN	5288.7	30	0	1194.7	0.106	+			48302	VTEGSFVYK	9	63	515.2658883231202	1028.5172237130403	2	515.2669067382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTEGSFVYK_	ENSG00000057608|ENST00000380191|GDI2;GDI2|p.S222Afs*20|1|0.1|ENSG00000057608|chr10:5785197-5785197|T/-|frameshift_variant	120.8684288430529	0.02067403653475984	5				NaN	NaN	0	NaN	6287	3858	10145
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10148	29.972	NaN	3322.6	30	0	515.54	0.106	+			10497	EVSKIVQTY	9	59	533.7923930599396	1065.5702331866792	2	533.7935791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EVSKIVQTY_	ENSG00000072110|ENST00000394419|ACTN1;nc|ENSG00000072110|P12814-2|ACTN1;nc|ENSG00000072110|P12814-4|ACTN1;nc|ENSG00000072110|P12814|ACTN1	120.8684288430529	0.02067403653475984	5				NaN	NaN	0	NaN	6288	3858	10145
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10149	29.974	NaN	3069.4	30	0	1389.8	0.106	+			32211	QTAGNVFLK	9	56	489.2750257200669	NaN	0	489.27685546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QTAGNVFLK_	ENSG00000120686|ENST00000239878|UFM1;nc|ENSG00000120686|P61960-2|UFM1	52.936696900407355	0.1864545979552969	5				NaN	NaN	0	NaN	6289	3858	10145
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10150	29.976	NaN	2052	30	0	525.12	0.035	+			1934	AISEYIATK	9	44	498.2740789456424	994.5336049580848	2	498.2748107910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AISEYIATK_	ENSG00000095002|ENST00000233146|MSH2;MSH2|p.M813Nfs*11|1|0.17|ENSG00000095002|chr2:47478497-47478498|-/A|frameshift_variant;MSH2|p.T806Kfs*4|1|0.2|ENSG00000095002|chr2:47478472-47478478|CACTCAC/-|frameshift_variant;nc|ENSG00000095002|P43246-2|MSH2	47.95952297671804	0.32689736945648856	5				NaN	NaN	0	NaN	6290	3858	10145
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10168	30.013	NaN	10736	30	0	1668.2	0.214	+			8192	EAAVAIKAM	9	61	452.2517757260654	902.4889985189308	2	452.2517395019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EAAVAIKAM_	ENSG00000132507|ENST00000336458|EIF5A;ENSG00000253626|ENST00000520547|EIF5AL1;nc|ENSG00000132507|P63241-2|EIF5A	176.41073772950895	0.0016726359177844747	5				NaN	NaN	0	NaN	6305	3861	10167
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10169	30.017	NaN	3242.6	30	0	767.71	0.106	+			30959	QENSRVIVM	9	59	538.2810985693058	1074.5476442054114	2	538.2821655273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QENSRVIVM_	ENSG00000111679|ENST00000318974|PTPN6;ENSG00000179295|ENST00000351677|PTPN11;ENST00000416215.6_1_12:7061038-7070080:+|nuORF;ENST00000511359.1_1_5:23303923-23304922:-|nuORF;nc|ENSG00000111679|P29350-2|PTPN6;nc|ENSG00000111679|P29350-3|PTPN6;nc|ENSG00000111679|P29350-4|PTPN6;nc|ENSG00000179295|Q06124-1|PTPN11;nc|ENSG00000179295|Q06124-3|PTPN11	56.72105179125745	0.24094814563026265	5				NaN	NaN	0	NaN	6306	3861	10167
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10170	30.019	NaN	4122.5	30	0	1098.8	0.106	+			3342	ASMPVDIAK	9	61	466.2490845482805	930.483616163361	2	466.2486572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASMPVDIAK_	ENSG00000108528|ENST00000225665|SLC25A11;ENST00000574710.1_1_17:4841038-4842521:-|nuORF;nc|ENSG00000108528|Q02978-2|SLC25A11	52.936696900407355	0.27249468807391813	5				NaN	NaN	0	NaN	6307	3861	10167
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10171	30.021	NaN	1050.1	30	0	125.44	0.106			+	-1	LECQQSLTY	9	48	571.2615690070295	NaN	0	571.26171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_LEC(Carbamidomethyl (C))QQSLTY_	REV__ADAMTS15|p.S441I|1|0.47|ENSG00000166106|chr11:130462560-130462560|G/T|missense_variant;REV__ENSG00000166106|ENST00000299164|ADAMTS15	60.11826168202944	0.14881452885248947	5				NaN	NaN	0	NaN	6308	3861	10167
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10172	30.022	NaN	1894.5	30	0	493.94	0.032			+	25091	LLNGQVAL	8	38	414.2530360509403	826.4915191686806	2	414.2528076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LLNGQVAL_	REV__ENSG00000154358|ENST00000680850|OBSCN;REV__nc|ENSG00000154358|Q5VST9-2|OBSCN;REV__nc|ENSG00000154358|Q5VST9-3|OBSCN;REV__nc|ENSG00000154358|Q5VST9-5|OBSCN;REV__nc|ENSG00000154358|Q5VST9-6|OBSCN;REV__nc|ENSG00000154358|Q5VST9|OBSCN;REV__OBSCN|p.E4688Dfs*35|1|0.03|ENSG00000154358|chr1:228318105-228318106|-/CATCTTC|frameshift_variant;REV__OBSCN|p.E4729Rfs*7|1|0.37|ENSG00000154358|chr1:228318930-228318931|-/C|frameshift_variant;REV__OBSCN|p.G1702Vfs*37|2|0.36|ENSG00000154358|chr1:228268769-228268769|G/-|frameshift_variant;REV__OBSCN|p.H7050Tfs*22|1|0.11|ENSG00000154358|chr1:228371922-228371922|C/-|frameshift_variant;REV__OBSCN|p.P6994Lfs*78|1|0.15|ENSG00000154358|chr1:228371756-228371756|C/-|frameshift_variant;REV__OBSCN|p.S5232Ffs*24|1|0.21|ENSG00000154358|chr1:228332900-228332901|-/T|frameshift_variant;REV__OBSCN|p.V3709Sfs*15|1|0.03|ENSG00000154358|chr1:228293609-228293610|-/A|frameshift_variant	46.76643321282427	0.6143254112625767	5				NaN	NaN	0	NaN	6309	3861	10167
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10189	30.058	NaN	60705	30	0	25612	0.214	+			40740	SVCVLDLRK	9	82	363.87415859552027	1088.600646386761	3	363.87420654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SVC(Carbamidomethyl (C))VLDLRK_	ENSG00000101849|ENST00000645353|TBL1X;ENSG00000177565|ENST00000457928|TBL1XR1;nc|ENSG00000101849|O60907-2|TBL1X;TBL1X|p.G568S|1|0.45|ENSG00000101849|chrX:9714998-9714998|G/A|missense_variant	70.8162118820467	0.13725933411854815	5				NaN	NaN	0	NaN	6323	3864	10188
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10190	30.061	NaN	6375	30	0	2611.1	0.106	+			31879	QPYTDGVRM	9	60	533.7524309005337	1065.4903088678673	2	533.75341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QPYTDGVRM_	ENSG00000173801|ENST00000393931|JUP;ENST00000585793.1_1_17:39914605-39919321:-|nuORF	40.77816245573522	0.41113185337114944	5				NaN	NaN	0	NaN	6324	3864	10188
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10191	30.063	NaN	4934.7	30	0	3242.1	0.106			+	37457	SLIPYMLLV	9	39	350.20977135047025	NaN	0	350.2095947265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLIPYMLLV_	REV__ENSG00000094841|ENST00000373383|UPRT;REV__ENST00000462237.5_1_X:74514443-74523343:+|nuORF;REV__nc|ENSG00000094841|Q96BW1-3|UPRT	26.69291269510374	0.34280015626154364	5				NaN	NaN	0	NaN	6325	3864	10188
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10192	30.065	NaN	1416.1	30	0	519.17	0.106			+	-1	CVTAVSYTT	9	53	501.23418056632295	1000.4538081994459	2	501.2340087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_C(Carbamidomethyl (C))VTAVSYTT_	REV__ACE|p.P1103Qfs*69|1|0.14|ENSG00000159640|chr17:63494393-63494393|C/-|frameshift_variant;REV__ACE|p.S903Rfs*9|1|0.07|ENSG00000159640|chr17:63491014-63491014|C/-|frameshift_variant;REV__ENSG00000159640|ENST00000290866|ACE;REV__ENST00000578839.5_1_17:61562212-61574724:+|nuORF;REV__nc|ENSG00000159640|P12821-2|ACE;REV__nc|ENSG00000159640|P12821-3|ACE;REV__nc|ENSG00000159640|P12821-4|ACE	25.450171626174864	0.5654022654467333	5				NaN	NaN	0	NaN	6326	3864	10188
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10193	30.067	NaN	833.47	30	0	62.997	0.035	+			41876	SVTKPEKEK	9	43	523.2980346679688	NaN	0	523.2980346679688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVTKPEKEK_	ENSG00000136531|ENST00000375437|SCN2A;ENSG00000196876|ENST00000627620|SCN8A;nc|ENSG00000136531|Q99250-2|SCN2A;nc|ENSG00000196876|Q9UQD0-3|SCN8A;nc|ENSG00000196876|Q9UQD0-5|SCN8A;nc|ENSG00000196876|Q9UQD0|SCN8A	31.634271133179894	0.31785226469614103	5				NaN	NaN	0	NaN	6327	3864	10188
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10211	30.104	NaN	2440.9	30	0	427.38	0.214	+			29729	PHPAVSIDS	9	52	461.73538735880095	921.4562217844019	2	461.7352294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PHPAVSIDS_	ENST00000343889.8_1_1:2411150-2434522:+|nuORF	31.954861631926434	0.5046124803899898	5				NaN	NaN	0	NaN	6342	3867	10210
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10212	30.108	NaN	1012.1	30	0	123.92	0.034	+			48257	VTDGFSSLK	9	46	477.25084061766006	NaN	0	477.2499694824219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTDGFSSLK_	ENSG00000110245|ENST00000227667|APOC3	36.446750945000026	0.29355505452396785	5				NaN	NaN	0	NaN	6343	3867	10210
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10229	30.142	NaN	1144.6	30	0	210.42	0.214	+			806	AEFTPAVHA	9	45	471.73812050995815	941.4616880867163	2	471.7377014160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEFTPAVHA_	ENSG00000188536|ENST00000251595|HBA2;ENSG00000206172|ENST00000320868|HBA1	53.351449002276354	0.2690372970092375	5				NaN	NaN	0	NaN	6357	3870	10228
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10230	30.146	NaN	2052	30	0	512.48	0.106	+			37059	SISAVVMEK	9	45	482.26269632353507	962.5108397138702	2	482.2632751464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SISAVVMEK_	ENSG00000138688|ENST00000679879|BLTP1;KIAA1109-FSIP2|1|fusion;nc|ENSG00000138688|Q2LD37-2|BLTP1;nc|ENSG00000138688|Q2LD37-4|BLTP1;nc|ENSG00000138688|Q2LD37-6|BLTP1;nc|ENSG00000138688|Q2LD37-7|BLTP1;nc|ENSG00000138688|Q2LD37|BLTP1	51.19269402634007	0.2889735674168909	5				NaN	NaN	0	NaN	6358	3870	10228
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10231	30.148	NaN	1431.6	30	0	235.98	0.036	+			18330	IPVEQKEGAF	10	63	559.2974843538186	1116.5804157744371	2	559.798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IPVEQKEGAF_	DDX21|p.I198Hfs*12|1|0.07|ENSG00000165732|chr10:68962140-68962141|-/ACATCACT|frameshift_variant;ENSG00000165732|ENST00000354185|DDX21;nc|ENSG00000165732|Q9NR30-2|DDX21	51.52775601994872	0.4429225830406686	5				NaN	NaN	0	NaN	6359	3870	10228
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10277	30.25	NaN	1849.9	30	0	597.6	0.141	+			40541	SVAALPVCK	9	38	444.25438258334805	886.4942122334961	2	444.25433349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVAALPVCK_	ENSG00000007255|ENST00000585934|TRAPPC6A;nc|ENSG00000007255|O75865-2|TRAPPC6A	63.30626980617807	0.18605348971131092	5				NaN	NaN	0	NaN	6396	3879	10276
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10295	30.288	NaN	3227.8	30	0	840.12	0.214	+			23376	LAADCAHEL	9	59	471.7211709047553	941.4277888763106	2	471.7215270996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LAADCAHEL_	ENSG00000157379|ENST00000288111|DHRS1;ENST00000558340.1_1_14:24760067-24761569:-|nuORF;ENST00000561137.5_1_14:24760413-24761527:-|nuORF;ENST00000561273.5_1_14:24760714-24761569:-|nuORF	60.97194046774394	0.20551255781574032	5				NaN	NaN	0	NaN	6411	3882	10294
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10296	30.292	NaN	4590.6	30	0	1727.5	0.033	+			18833	IVAGSLITK	9	52	451.28910986531923	900.5636667974385	2	451.28948974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IVAGSLITK_	ENSG00000196504|ENST00000545856|PRPF40A;nc|ENSG00000196504|O75400-2|PRPF40A;nc|ENSG00000196504|O75400|PRPF40A;PRPF40A|p.K411Sfs*40|2|0.19|ENSG00000196504|chr2:152672597-152672597|T/-|frameshift_variant;PRPF40A|p.Q412Afs*4|1|0.16|ENSG00000196504|chr2:152672596-152672597|-/T|frameshift_variant	62.107414245175825	0.1960472003779324	5				NaN	NaN	0	NaN	6412	3882	10294
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10314	30.329	NaN	209410	30	0	96253	0.214			+	12365	GDQNVQLKLKT	11	92	415.2381354628026	1242.6925769886077	3	415.2381286621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GDQNVQLKLKT_	REV__ENSG00000149782|ENST00000279230|PLCB3;REV__nc|ENSG00000149782|Q01970-2|PLCB3;REV__PLCB3|p.R918Afs*95|5|0.32|ENSG00000149782|chr11:64265045-64265045|C/-|frameshift_variant	52.167168403610894	0.39337392184041037	5				NaN	NaN	0	NaN	6427	3885	10313
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10315	30.332	NaN	5102.6	30	0	687.02	0.106	+			1544	AGDGLIELRK	10	67	536.3106913206433	1070.6068297080865	2	536.3115844726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AGDGLIELRK_	ENSG00000167085|ENST00000300408|PHB1	101.45984612302182	0.07336148045341315	5				NaN	NaN	0	NaN	6428	3885	10313
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10316	30.334	NaN	1376.9	30	0	234.98	0.106			+	34659	RVRGRGPR	8	57	477.29738781808555	952.5802227029711	2	477.2974853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RVRGRGPR_	REV__ENST00000511412.1_1_17:79847713-79848864:-|nuORF;REV__ENST00000555995.1_1_14:91755401-91757391:-|nuORF	31.954861631926434	0.7126016770032289	5				NaN	NaN	0	NaN	6429	3885	10313
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10317	30.336	NaN	1668.8	30	0	400.54	0.106	+			30506	QAFGSGNNSY	10	55	522.722142181253	1043.429731429306	2	522.7227172851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QAFGSGNNSY_	ENSG00000120948|ENST00000240185|TARDBP;nc|ENSG00000120948|Q13148-4|TARDBP	68.84614121027924	0.2867470276772903	5				NaN	NaN	0	NaN	6430	3885	10313
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10318	30.338	NaN	1133.3	30	0	179	0.106	+			27550	MPEASGPKF	9	49	482.2342733392333	NaN	0	482.2335510253906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MPEASGPKF_	ENSG00000197077|ENST00000358431|KIAA1671;KIAA1671|p.S1569Afs*58|1|0.46|ENSG00000197077|chr22:25174289-25174289|C/-|frameshift_variant;KIAA1671|p.T1322Rfs*192|1|0.18|ENSG00000197077|chr22:25041088-25041088|A/-|frameshift_variant	45.97224482568171	0.23445038899310136	5				NaN	NaN	0	NaN	6431	3885	10313
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10319	30.34	NaN	3498.8	30	0	2053	0.038	+			39080	SSSSRSRSRSP	11	41	398.5366628352274	1192.5881591058821	3	398.53619384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSSSRSRSRSP_	ACIN1|p.E945Lfs*13|1|0.03|ENSG00000100813|chr14:23063514-23063515|-/AG|frameshift_variant;ENSG00000100813|ENST00000605057|ACIN1;ENSG00000148840|ENST00000278070|PPRC1;nc|ENSG00000100813|Q9UKV3-5|ACIN1;nc|ENSG00000100813|Q9UKV3|ACIN1;nc|ENSG00000148840|Q5VV67-2|PPRC1	23.37791116691581	0.7445759747191538	5				NaN	NaN	0	NaN	6432	3885	10313
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10320	30.34	NaN	1115.2	30	0	101.45	0.14	+			40559	SVAECQLMK	9	57	504.7464566120151	1007.4783602908302	2	505.24749755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVAECQLMK_	ENSG00000105221|ENST00000392038|AKT2;ENST00000391844.8_1_19:40739781-40791100:-|nuORF;ENST00000537834.5_1_19:40745726-40771198:-|nuORF;nc|ENSG00000105221|P31751-2|AKT2	36.446750945000026	0.4619375763483977	5				NaN	NaN	0	NaN	6433	3885	10313
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10338	30.38	NaN	5422.3	30	0	480.67	0.214	+			2512	APVEVTHNF	9	67	507.2559456351438	1012.4973383370876	2	507.2562255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_APVEVTHNF_	ENSG00000005007|ENST00000262803|UPF1;nc|ENSG00000005007|Q92900|UPF1	93.1432384553994	0.056003526918089595	5				NaN	NaN	0	NaN	6448	3888	10337
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10339	30.383	NaN	5664.7	30	0	861.16	0.106	+			4806	ATNSSMFLK	9	60	499.7523798093586	997.4902066855173	2	499.752197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATNSSMFLK_	COG5|p.K795Rfs*18|1|0.42|ENSG00000164597|chr7:107210547-107210547|T/-|frameshift_variant;ENSG00000164597|ENST00000297135|COG5;nc|ENSG00000164597|Q9UP83-1|COG5;nc|ENSG00000164597|Q9UP83-3|COG5;nc|ENSG00000164597|Q9UP83|COG5	109.43880257439609	0.029570636687953285	5				NaN	NaN	0	NaN	6449	3888	10337
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10340	30.385	NaN	1288.2	30	0	277.17	0.106			+	29930	PLVKGRSPDKE	11	40	409.2345932456609	1224.6819503371828	3	409.2351379394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PLVKGRSPDKE_	REV__ENST00000515521.5_1_4:3422373-3428454:+|nuORF	15.333111300571575	0.7986936308376149	5				NaN	NaN	0	NaN	6450	3888	10337
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10341	30.387	NaN	696.78	30	0	68.912	0.106	+			21504	KNLRQMGRQL	10	35	622.3541684418688	NaN	0	622.3543701171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KNLRQMGRQL_	ENSG00000139734|ENST00000400324|DIAPH3;nc|ENSG00000139734|Q9NSV4-1|DIAPH3;nc|ENSG00000139734|Q9NSV4-4|DIAPH3;nc|ENSG00000139734|Q9NSV4-5|DIAPH3;nc|ENSG00000139734|Q9NSV4-6|DIAPH3;nc|ENSG00000139734|Q9NSV4-7|DIAPH3	26.063383197487333	0.4145965855542893	5				NaN	NaN	0	NaN	6451	3888	10337
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10342	30.389	NaN	1510.9	30	0	100.52	0.106			+	32055	QRVLDDTVKV	10	54	586.834716796875	NaN	0	586.834716796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QRVLDDTVKV_	REV__nc|ENSG00000143742|P49458-2|SRP9	39.252832667884924	0.37128895876774715	5				NaN	NaN	0	NaN	6452	3888	10337
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10343	30.391	NaN	1545.1	30	0	417.62	0.034	+			26721	LVLAMALGW	9	46	487.28131414815596	972.5480753631119	2	487.2814636230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LVLAMALGW_	ENSG00000167723|ENST00000576742|TRPV3;nc|ENSG00000167723|Q8NET8-2|TRPV3;nc|ENSG00000167723|Q8NET8-3|TRPV3	49.21078951299608	0.3122205139198386	5				NaN	NaN	0	NaN	6453	3888	10337
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10344	30.391	NaN	2455.3	30	0	685.92	0.141			+	50333	WVARDNVTE	9	55	545.2717980789754	NaN	0	545.2716674804688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_WVARDNVTE_	REV__ENST00000452544.2_2_6:157472012-157472270:+|nuORF	39.252832667884924	0.27938773122138094	5				NaN	NaN	0	NaN	6454	3888	10337
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10362	30.43	NaN	2797.7	30	0	599.83	0.142	+			17812	IEVNKSGTV	9	45	473.76360881422846	945.512664695257	2	473.76348876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IEVNKSGTV_	SERPINE1|p.E353K|1|0.29|ENSG00000106366|chr7:101135771-101135771|G/A|missense_variant	62.107414245175825	0.1960472003779324	5				NaN	NaN	0	NaN	6469	3891	10361
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10379	30.466	NaN	8922.9	30	0	1315.3	0.214	+			16015	HASDRIIAL	9	79	498.28557661002964	994.5566002868593	2	498.2851257324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HASDRIIAL_	ENSG00000163931|ENST00000462138|TKT;ENST00000460343.5_1_3:53261754-53265639:-|nuORF;ENST00000461139.5_1_3:53259774-53265639:-|nuORF;ENST00000469678.1_1_3:53259917-53265542:-|nuORF;nc|ENSG00000163931|P29401-2|TKT	63.53385203322761	0.18415635464017938	5				NaN	NaN	0	NaN	6483	3894	10378
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10380	30.47	NaN	1766.1	30	0	467.3	0.034	+			49602	VYGKVDSF	8	49	457.734524182997	913.454495432794	2	457.7342224121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYGKVDSF_	ENSG00000152127|ENST00000281923|MGAT5	60.97194046774394	0.49215940876911696	5				NaN	NaN	0	NaN	6484	3894	10378
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10395	30.501	NaN	4482.7	30	0	752.69	0.214	+			16009	HAREWISP	8	66	498.25581663611655	994.4970803390331	2	498.2557067871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HAREWISP_	CON__Q2KIG3;ENSG00000080618|ENST00000181383|CPB2;ENSG00000153002|ENST00000282957|CPB1;nc|ENSG00000080618|Q96IY4-2|CPB2	53.351449002276354	0.5676011784961348	5				NaN	NaN	0	NaN	6496	3897	10394
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10396	30.505	NaN	1951.6	30	0	457.8	0.106			+	29894	PLMWPALGK	9	54	506.7878245533536	1011.5610961735072	2	506.7882995605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PLMWPALGK_	REV__ENST00000318782.8_1_16:3021955-3022234:+|nuORF	40.5726180659479	0.4135428067754104	5				NaN	NaN	0	NaN	6497	3897	10394
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10397	30.507	NaN	1973.4	30	0	251.99	0.034	+			4062	ATDIVTGLK	9	49	459.26877769278565	916.5230024523713	2	459.26873779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATDIVTGLK_	ENSG00000007952|ENST00000372966|NOX1;nc|ENSG00000007952|Q9Y5S8-3|NOX1	72.87924865735499	0.12833875048249987	5				NaN	NaN	0	NaN	6498	3897	10394
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10414	30.542	NaN	5857.4	30	0	3302	0.214	+			5741	AVGALGNAVIL	11	65	499.306097796838	996.597642660476	2	499.30609130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVGALGNAVIL_	ENSG00000137809|ENST00000315757|ITGA11;nc|ENSG00000137809|Q9UKX5-2|ITGA11	42.33807565288922	0.5259510355945483	5				NaN	NaN	0	NaN	6512	3900	10413
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10415	30.545	NaN	2881.7	30	0	1281.1	0.034			+	35763	SDWPIRIS	8	60	487.2601636294606	972.5057743257212	2	487.2606201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SDWPIRIS_	REV__ENST00000265056.11_2_3:127340622-127340844:+|nuORF	42.396135135203025	0.6414440140393314	5				NaN	NaN	0	NaN	6513	3900	10413
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10433	30.582	NaN	2601.2	30	0	600.91	0.141	+			34889	SAAAALVLK	9	51	422.2686819794266	842.5228110256533	2	422.2690124511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAAAALVLK_	ENSG00000137076|ENST00000314888|TLN1;nc|ENSG00000137076|Q9Y490-2|TLN1;TLN1|p.P1628Rfs*20|1|0.44|ENSG00000137076|chr9:35707144-35707144|G/-|frameshift_variant	98.62937762414208	0.04060045538121712	5				NaN	NaN	0	NaN	6528	3903	10432
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10464	30.651	NaN	33276	30	0	18711	0.214	+			31337	QISEVVVVK	9	73	500.8054515884523	999.5963502437046	2	500.8050842285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QISEVVVVK_	ENSG00000099622|ENST00000587896|CIRBP;nc|ENSG00000099622|Q14011-2|CIRBP;nc|ENSG00000099622|Q14011|CIRBP	126.24258497203832	0.01742065577488747	5				NaN	NaN	0	NaN	6553	3909	10463
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10465	30.654	NaN	3406	30	0	1092.3	0.106	+			47300	VNPKAAII	8	44	413.2630785255505	824.511604117901	2	413.2628173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VNPKAAII_	tr|U7T4M0|U7T4M0_FUSNUCobW/HypB/UreGnucleotide-bindingdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00363PE=4SV=1	28.2542754592877	0.7411748056684583	5				NaN	NaN	0	NaN	6554	3909	10463
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10466	30.656	NaN	1342.6	30	0	274.45	0.034	+			39876	STLPLGGFQ	9	46	460.24895632539057	918.4833597175812	2	460.2482604980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STLPLGGFQ_	ENSG00000170262|ENST00000303645|MRAP;nc|ENSG00000170262|Q8TCY5-1|MRAP;nc|ENSG00000170262|Q8TCY5-3|MRAP	44.116797842482775	0.37197099687881774	5				NaN	NaN	0	NaN	6555	3909	10463
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10480	30.686	NaN	6263.2	30	0	1589.3	0.215	+			6318	AVTDAIMSR	9	55	482.2498348488528	962.4851167645056	2	482.2497253417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVTDAIMSR_	ENSG00000162298|ENST00000377190|SYVN1;ENST00000449943.5_1_11:64897669-64899838:-|nuORF;nc|ENSG00000162298|Q86TM6-2|SYVN1;nc|ENSG00000162298|Q86TM6-3|SYVN1;SYVN1|p.N368Qfs*129|1|0.33|ENSG00000162298|chr11:65130663-65130664|-/G|frameshift_variant;SYVN1|p.N368Tfs*117|1|0.4|ENSG00000162298|chr11:65130664-65130664|G/-|frameshift_variant	85.86182877749512	0.07653218437724067	5				NaN	NaN	0	NaN	6566	3912	10479
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10481	30.69	NaN	987.69	30	0	222.95	0.033	+			20621	KGEQPLLL	8	45	449.2734375	NaN	0	449.2734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KGEQPLLL_	ENSG00000137266|ENST00000406686|SLC22A23;ENST00000497691.5_1_6:3273291-3410459:-|nuORF;nc|ENSG00000137266|A1A5C7-2|SLC22A23;nc|ENSG00000137266|A1A5C7-3|SLC22A23	44.116797842482775	1.7418937515398478	5				NaN	NaN	0	NaN	6567	3912	10479
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10497	30.723	NaN	2783.4	30	0	418.03	0.214	+			11911	FVAEQKVEY	9	55	556.7842238943267	1111.5538948554533	2	556.7855224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FVAEQKVEY_	ENSG00000114867|ENST00000346169|EIF4G1;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;ENST00000460829.5_1_3:184046782-184052693:+|nuORF;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1	101.25262130126117	0.03792372629710479	5				NaN	NaN	0	NaN	6580	3915	10496
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10498	30.726	NaN	1076.4	30	0	137.5	0.035	+			41422	SVNFDMTSK	9	48	514.7383422851562	NaN	0	514.7383422851562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVNFDMTSK_	ENSG00000170248|ENST00000307296|PDCD6IP;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP	45.02220120713402	0.24099765136254067	5				NaN	NaN	0	NaN	6581	3915	10496
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10527	30.79	NaN	6325.8	30	0	2266.4	0.214	+			41206	SVLDSSALK	9	56	460.2583432339441	918.5021335346883	2	460.2584228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVLDSSALK_	ENSG00000197077|ENST00000358431|KIAA1671;ENST00000494730.2_1_22:25573299-25581087:+|nuORF;nc|ENSG00000197077|Q9BY89-2|KIAA1671	49.536043120802724	0.308405419312776	5				NaN	NaN	0	NaN	6604	3921	10526
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10528	30.794	NaN	2032.2	30	0	289.22	0.106	+			4423	ATIEELTEK	9	62	517.2739754347929	1032.5333979363857	2	517.2747192382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATIEELTEK_	ENSG00000159140|ENST00000356577|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-4|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-7|SON;nc|ENSG00000159140|P18583-9|SON	109.47833844074708	0.029530294723441826	5				NaN	NaN	0	NaN	6605	3921	10526
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10529	30.796	NaN	1407.5	30	0	210.69	0.035	+			43985	TPGGTRIIY	9	47	489.274364644747	NaN	0	489.2740783691406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TPGGTRIIY_	ENSG00000148730|ENST00000373218|EIF4EBP2;ENSG00000187840|ENST00000338825|EIF4EBP1;ENSG00000243056|ENST00000310331|EIF4EBP3	51.19269402634007	0.19847346126499396	5				NaN	NaN	0	NaN	6606	3921	10526
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10560	30.863	NaN	2167.5	30	0	419.83	0.143	+			35022	SACSFTFSK	9	57	517.733876262404	1033.453199591608	2	517.7348022460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SAC(Carbamidomethyl (C))SFTFSK_	ENSG00000131375|ENST00000253693|CAPN7;ENST00000443567.5_1_3:15282348-15292515:+|nuORF	70.8162118820467	0.13725933411854815	5				NaN	NaN	0	NaN	6631	3927	10559
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10578	30.901	NaN	2042.3	30	0	502.78	0.214	+			27556	MPEKEPSVL	9	52	515.2678823572695	1028.521211781339	2	515.2689208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MPEKEPSVL_	ENSG00000155229|ENST00000438925|MMS19;ENST00000495415.5_1_10:99221527-99223714:-|nuORF;nc|ENSG00000155229|Q96T76-5|MMS19;nc|ENSG00000155229|Q96T76-8|MMS19;nc|ENSG00000155229|Q96T76-9|MMS19	58.22992032128504	0.22837015374068087	5				NaN	NaN	0	NaN	6646	3930	10577
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10579	30.905	NaN	2652.5	30	0	904.13	0.038			+	32723	RAMVIELSDK	10	37	387.8812919851371	1160.6220465556114	3	387.8813171386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RAMVIELSDK_	REV__ENST00000560451.5_1_15:91463647-91463971:+|nuORF	20.83715455343099	0.7096666582730032	5				NaN	NaN	0	NaN	6647	3930	10577
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10597	30.942	NaN	3287	30	0	870.4	0.214	+			28072	NADPQAVTM	9	60	473.7184066846655	945.4222604361311	2	473.7188720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NADPQAVTM_	ENSG00000102316|ENST00000375068|MAGED2;nc|ENSG00000102316|Q9UNF1-2|MAGED2	78.26377905018397	0.10505600812668463	5				NaN	NaN	0	NaN	6662	3933	10596
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10598	30.946	NaN	1190.4	30	0	126.66	0.106	+			2415	APAPSTVHF	9	51	463.7405018830739	925.4664508329478	2	463.740478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_APAPSTVHF_	ENSG00000155090|ENST00000285407|KLF10;nc|ENSG00000155090|Q13118-2|KLF10	42.47446043378293	0.39123495718708534	5				NaN	NaN	0	NaN	6663	3933	10596
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10599	30.948	NaN	1406.7	30	0	615.61	0.106	+			44216	TRLILEGQD	9	51	522.7880949306681	1043.561636928136	2	523.2903442382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TRLILEGQD_	ENSG00000170185|ENST00000307017|USP38;nc|ENSG00000170185|Q8NB14-2|USP38;USP38|p.K823Nfs*2|1|0.24|ENSG00000170185|chr4:143214440-143214440|A/-|frameshift_variant;USP38|p.L816Hfs*13|1|0.05|ENSG00000170185|chr4:143214419-143214420|-/ATCATATGAAA|frameshift_variant	63.53385203322761	0.18415635464017938	5				NaN	NaN	0	NaN	6664	3933	10596
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10600	30.949	NaN	1065.7	30	0	135.65	0.035			+	-1	WGGGMDVGIN	10	36	511.22404505567727	1020.4335371781546	2	511.22454833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_WGGGM(Oxidation (M))DVGIN_	REV__ENST00000495868.1_1_1:53692676-53692748:-|nuORF	27.882242232435846	0.6521336255503853	5				NaN	NaN	0	NaN	6665	3933	10596
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10617	30.984	NaN	7691.2	30	0	803.94	0.214	+			3765	ATAELIMSR	9	64	496.2655785260003	990.5166041188006	2	496.2658996582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATAELIMSR_	ENSG00000105677|ENST00000222284|TMEM147;ENST00000477168.6_1_19:36036641-36037810:+|nuORF;ENST00000595467.1_1_19:36037522-36037810:+|nuORF;nc|ENSG00000105677|Q9BVK8-2|TMEM147	146.78539889680295	0.007618400906539062	5				NaN	NaN	0	NaN	6679	3936	10616
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10618	30.988	NaN	2165	30	0	199.86	0.106	+			19832	KEDSKLIAL	9	54	508.80306564404515	1015.5915783548903	2	508.8037414550781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEDSKLIAL_	ENSG00000090686|ENST00000308271|USP48;nc|ENSG00000090686|Q86UV5-2|USP48;nc|ENSG00000090686|Q86UV5-5|USP48;nc|ENSG00000090686|Q86UV5-8|USP48;USP48|p.L982Ffs*9|1|0.08|ENSG00000090686|chr1:21690037-21690038|-/GG|frameshift_variant	75.04331003522576	0.118981335847003	5				NaN	NaN	0	NaN	6680	3936	10616
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10619	30.99	NaN	10754	30	0	8323.3	0.106				-1	 	0	46	372.2015761517932	742.3885993703864	2	372.2020568847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6681	3936	10616
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10620	30.992	NaN	2536.6	30	0	555.04	0.106	+			45315	TVSELVISK	9	52	488.2897485672287	NaN	0	488.2898864746094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TVSELVISK_	ENSG00000189180|ENST00000432900|ZNF33A;ENSG00000196693|ENST00000359467|ZNF33B;nc|ENSG00000189180|Q06730-3|ZNF33A;nc|ENSG00000189180|Q06730|ZNF33A;ZNF33A|p.E689Rfs*83|1|0.35|ENSG00000189180|chr10:38056188-38056188|G/-|frameshift_variant;ZNF33A|p.Y580Cfs*21|1|0.05|ENSG00000189180|chr10:38055865-38055866|-/GTGTGTGTTCTCTG|frameshift_variant	54.722347961057174	0.17414871455573902	5				NaN	NaN	0	NaN	6682	3936	10616
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10621	30.994	NaN	2583.4	30	0	315.75	0.106	+			48755	VTVQEMVTK	9	69	517.7807364753434	1033.5469200174866	2	517.781005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTVQEMVTK_	ENSG00000137076|ENST00000314888|TLN1;ENST00000486788.2_1_9:35704327-35706084:-|nuORF;nc|ENSG00000137076|Q9Y490-2|TLN1	101.45984612302182	0.0377122763612125	5				NaN	NaN	0	NaN	6683	3936	10616
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10622	30.995	NaN	1130	30	0	205.61	0.037			+	10693	EYVHIKHTL	9	29	380.5440673828125	NaN	0	380.5440673828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EYVHIKHTL_	REV__PON1|p.A242T|1|0.38|ENSG00000005421|chr7:95306341-95306341|C/T|missense_variant	20.94693142431847	0.3660861156085067	5				NaN	NaN	0	NaN	6684	3936	10616
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10639	31.03	NaN	15860	30	0	6594.8	0.214	+			37384	SLFSSKLST	9	62	485.2657726285755	968.5169923239511	2	485.26568603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLFSSKLST_	ENSG00000058804|ENST00000371429|NDC1;nc|ENSG00000058804|Q9BTX1-2|NDC1;nc|ENSG00000058804|Q9BTX1-4|NDC1;nc|ENSG00000058804|Q9BTX1-5|NDC1;nc|ENSG00000058804|Q9BTX1-6|NDC1	79.45101966838831	0.09992237243120712	5				NaN	NaN	0	NaN	6698	3939	10638
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10640	31.034	NaN	1266.1	30	0	198.28	0.035	+			7215	DAISKTYSY	9	56	524.2525206480974	NaN	0	524.2520751953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DAISKTYSY_	ENSG00000140988|ENST00000343262|RPS2;ENST00000397318.4_1_X:40794237-40794825:-|nuORF;ENST00000438210.1_1_1:40428398-40429073:+|nuORF;ENST00000441047.1_1_17:51834352-51834658:-|nuORF;ENST00000443417.1_1_9:102879039-102879699:-|nuORF;ENST00000475555.1_1_4:144270430-144270667:-|nuORF;ENST00000494359.1_1_11:17250107-17250695:+|nuORF;ENST00000529806.5_1_16:2012098-2012518:-|nuORF;ENST00000532746.5_2_16:2012101-2013785:-|nuORF;ENST00000533872.5_1_16:2012101-2013018:-|nuORF;RPL18-RPS2|1|fusion	114.8945686534367	0.005276929498059453	5				NaN	NaN	0	NaN	6699	3939	10638
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10671	31.102	NaN	6691.1	30	0	932.63	0.214	+			4655	ATLQEALAH	9	61	477.25588470509206	952.4972164769841	2	477.2558288574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATLQEALAH_	ENSG00000137497|ENST00000393695|NUMA1;nc|ENSG00000137497|Q14980-2|NUMA1;nc|ENSG00000137497|Q14980-3|NUMA1;nc|ENSG00000137497|Q14980-4|NUMA1;NUMA1|p.K1766Rfs*2|1|0.39|ENSG00000137497|chr11:72007357-72007357|G/-|frameshift_variant;NUMA1|p.L1786Pfs*18|1|0.23|ENSG00000137497|chr11:72007295-72007296|-/G|frameshift_variant	148.98678547993487	0.0071052929883181565	5				NaN	NaN	0	NaN	6724	3945	10670
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10672	31.105	NaN	3032.4	30	0	1190.3	0.106				-1	 	0	27	350.20672097169256	698.3988890101851	2	350.20684814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6725	3945	10670
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10673	31.107	NaN	1034.5	30	0	165.41	0.106			+	17319	IAGAKGKPGP	10	40	448.2712946414011	NaN	0	448.2710266113281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IAGAKGKPGP_	REV__ENSG00000145861|ENST00000652664|C1QTNF2	29.14955571784316	0.4044631218331212	5				NaN	NaN	0	NaN	6726	3945	10670
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10674	31.109	NaN	853.52	30	0	166.75	0.036	+			49467	VVYEFSTTK	9	40	537.2794268331924	NaN	0	537.2792358398438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVYEFSTTK_	ENSG00000164151|ENST00000296564|ICE1;ICE1|p.H1965Afs*55|1|0.29|ENSG00000164151|chr5:5465219-5465220|-/A|frameshift_variant	19.996771675451527	0.3693019437812985	5				NaN	NaN	0	NaN	6727	3945	10670
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10698	31.163	NaN	1771.6	30	0	229.11	0.145			+	25178	LLYLREMDH	9	51	595.3034138750254	NaN	0	595.3041381835938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LLYLREMDH_	REV__tr|U7SQR4|U7SQR4_FUSNUGlycosyltransferaseRgtA/B/C/D-likedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01666PE=4SV=1	34.172542307311794	0.30503706118289736	5				NaN	NaN	0	NaN	6745	3951	10697
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10727	31.229	NaN	1736.2	30	0	572.34	0.214	+			3273	ASLPGGVLK	9	39	421.26060568960986	840.5066584460197	2	421.26068115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASLPGGVLK_	ENSG00000185477|ENST00000609438|GPRIN3;GPRIN3|p.Q666Afs*23|1|0.42|ENSG00000185477|chr4:89248116-89248117|-/T|frameshift_variant	51.33545320467046	0.2872990594074956	5				NaN	NaN	0	NaN	6768	3957	10726
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10728	31.232	NaN	2382.6	30	0	237.6	0.106	+			16110	HDLVIKSL	8	55	462.77932460570486	923.5440962782097	2	463.28131103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HDLVIKSL_	ENSG00000100342|ENST00000397278|APOL1;nc|ENSG00000100342|O14791-2|APOL1;nc|ENSG00000100342|O14791-3|APOL1	101.60071028292904	0.24979566554663588	5				NaN	NaN	0	NaN	6769	3957	10726
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10729	31.234	NaN	706.84	30	0	96.213	0.033			+	15049	GTNQDIAF	8	36	433.2076416015625	NaN	0	433.2076416015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTNQDIAF_	REV__DCHS2|p.C2517Sfs*5|1|0.13|ENSG00000197410|chr4:154235737-154235737|C/-|frameshift_variant;REV__ENSG00000197410|ENST00000357232|DCHS2	42.396135135203025	1.7418937515398478	5				NaN	NaN	0	NaN	6770	3957	10726
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10744	31.265	NaN	7726.9	30	0	1619.1	0.143	+			47939	VSMDYAISK	9	62	507.25206138187275	1012.4895698305455	2	507.25286865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSMDYAISK_	ENSG00000196453|ENST00000247930|ZNF777;ZNF777|p.P504Rfs*5|1|0.44|ENSG00000196453|chr7:149432761-149432761|G/-|frameshift_variant	126.24258497203832	0.01742065577488747	5				NaN	NaN	0	NaN	6782	3960	10743
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10758	31.296	NaN	4210.8	30	0	2495.5	0.214	+			8049	DVDAAVEKL	9	54	480.2558044364607	958.4970559397215	2	480.2557678222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DVDAAVEKL_	ENSG00000175520|ENST00000311659|UBQLN3	62.107414245175825	0.1960472003779324	5				NaN	NaN	0	NaN	6793	3963	10757
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10759	31.3	NaN	2928.2	30	0	219.94	0.106	+			46377	VELAESRAL	9	56	494.27697473696355	986.5393965407271	2	494.2770080566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VELAESRAL_	ENST00000340533.8_2_18:71959085-71959217:-|nuORF	98.58198989935565	0.04066992115528678	5				NaN	NaN	0	NaN	6794	3963	10757
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10760	31.302	NaN	1850.8	30	0	355.24	0.106			+	39892	STLSLIDTK	9	52	489.27953649288037	NaN	0	489.279541015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STLSLIDTK_	REV__ENSG00000275004|ENST00000626650|ZNF280B	34.172542307311794	0.30503706118289736	5				NaN	NaN	0	NaN	6795	3963	10757
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10761	31.304	NaN	2253.6	30	0	614.04	0.106	+			44964	TVCDLIQSK	9	54	532.2757149105727	1062.5368768879453	2	532.2767944335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_TVC(Carbamidomethyl (C))DLIQSK_	ENSG00000030582|ENST00000053867|GRN;ENST00000585348.1_1_17:42428425-42428671:+|nuORF;nc|ENSG00000030582|P28799-2|GRN	88.17693792209575	0.07000514020414955	5				NaN	NaN	0	NaN	6796	3963	10757
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10762	31.305	NaN	1691.2	30	0	191.87	0.106	+			46508	VEVEKESVL	9	51	516.2846065930212	NaN	0	516.2841796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VEVEKESVL_	ENSG00000156017|ENST00000376834|CARNMT1	44.377184641726394	0.24544280798894275	5				NaN	NaN	0	NaN	6797	3963	10757
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10763	31.307	NaN	389.93	30	0	107.15	0.106			+	36629	SGGLGAPL	8	24	336.19091796875	NaN	0	336.19091796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SGGLGAPL_	REV__ENST00000575894.1_1_16:697728-698187:+|nuORF	21.70233525837049	1.7418937515398478	5				NaN	NaN	0	NaN	6798	3963	10757
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10764	31.309	NaN	1371	30	0	178.35	0.034			+	3553	ASTKEPTAL	9	45	459.2506446176667	916.4867363021334	2	459.2514953613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASTKEPTAL_	REV__ENST00000046794.9_1_5:169724659-169724776:-|nuORF	39.252832667884924	0.4290233611298554	5				NaN	NaN	0	NaN	6799	3963	10757
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10778	31.338	NaN	5773	30	0	3187.7	0.214			+	25255	LNLHPIQS	8	54	461.2613752188391	920.5081975044782	2	461.2611083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LNLHPIQS_	REV__ENSG00000186300|ENST00000334241|ZNF555;REV__nc|ENSG00000186300|Q8NEP9-2|ZNF555;REV__nc|ENSG00000186300|Q8NEP9-4|ZNF555;REV__ZNF555|p.E540Dfs*28|1|0.06|ENSG00000186300|chr19:2853684-2853685|-/T|frameshift_variant	60.97194046774394	0.49215940876911696	5				NaN	NaN	0	NaN	6810	3966	10777
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10779	31.342	NaN	2546.8	30	0	245.69	0.106	+			22033	KSIDFPLTK	9	61	524.8053419398835	1047.596130946567	2	525.30712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KSIDFPLTK_	ENSG00000084073|ENST00000372759|ZMPSTE24	46.45678178249821	0.34452392205506005	5				NaN	NaN	0	NaN	6811	3966	10777
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10780	31.344	NaN	1610.4	30	0	414.25	0.106	+			30307	PTMPVSSPLV	10	53	514.2770658627745	1026.539578792349	2	514.27783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PTMPVSSPLV_	ENST00000248948.3_1_22:24095052-24095358:-|nuORF	49.44154591367651	0.46214596422418036	5				NaN	NaN	0	NaN	6812	3966	10777
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10781	31.346	NaN	607.71	30	0	186.15	0.035				-1	LHPGVPGRM	9	32	490.2628479003906	NaN	0	490.2628479003906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_LHPGVPGRM(Oxidation (M))_	ENST00000345901.7_2_17:3593972-3599357:-|nuORF;ENST00000550383.1_1_17:3594253-3599357:-|nuORF	19.359975847455235	0.3714571876404798	5				NaN	NaN	0	NaN	6813	3966	10777
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10799	31.383	NaN	4307.7	30	0	901.95	0.214				-1	 	0	54	458.26640670829255	457.25913024169256	1	458.266845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6828	3969	10798
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10800	31.387	NaN	4201.2	30	0	407.5	0.106	+			35139	SAIAAVIAR	9	49	436.2715828602475	870.5286127872951	2	436.2716979980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAIAAVIAR_	ENSG00000165949|ENST00000612813|IFI27;nc|ENSG00000165949|P40305-1|IFI27;nc|ENSG00000165949|P40305-3|IFI27;nc|ENSG00000165949|P40305-4|IFI27	107.00750918261382	0.032051501805654005	5				NaN	NaN	0	NaN	6829	3969	10798
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10801	31.389	NaN	3902.2	30	0	637.12	0.106			+	14437	GTATLYKLS	9	54	477.2686179718138	952.5226830104276	2	477.2693176269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTATLYKLS_	REV__ENST00000507036.1_1_5:7867877-7868021:-|nuORF	41.42661286455405	0.403525789677298	5				NaN	NaN	0	NaN	6830	3969	10798
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10802	31.391	NaN	16152	30	0	10430	0.106			+	12050	FYVDVTRSL	9	45	367.19738370168284	1098.5703217052485	3	367.1981201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FYVDVTRSL_	REV__ENSG00000149571|ENST00000525144|KIRREL3;REV__KIRREL3|p.I421Sfs*63|1|0.2|ENSG00000149571|chr11:126440542-126440542|G/-|frameshift_variant;REV__KIRREL3|p.N575Mfs*27|1|0.29|ENSG00000149571|chr11:126429261-126429261|T/-|frameshift_variant;REV__nc|ENSG00000149571|Q8IZU9-2|KIRREL3	24.20275056022122	0.577060078256802	5				NaN	NaN	0	NaN	6831	3969	10798
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10803	31.393	NaN	805.95	30	0	71.499	0.033	+			13278	GIVGLQLR	8	41	428.27447837981526	854.5344038264305	2	428.2745056152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GIVGLQLR_	tr|U7T092|U7T092_FUSNUGeneralsecretionpathwayproteinGOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00778PE=4SV=1	71.37791200682192	0.3954169775488141	5				NaN	NaN	0	NaN	6832	3969	10798
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10821	31.43	NaN	4485.1	30	0	597.07	0.214	+			13069	GFGTDFKK	8	60	450.2341386703198	898.4537244074396	2	450.234619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GFGTDFKK_	ENSG00000049860|ENST00000261416|HEXB;ENST00000504459.5_1_5:74009375-74016573:+|nuORF;ENST00000511621.1_1_5:74011483-74012499:+|nuORF;HEXB|p.M522Kfs*9|1|0.15|ENSG00000049860|chr5:74720697-74720698|-/AA|frameshift_variant	57.81127852772723	0.5234495074909924	5				NaN	NaN	0	NaN	6847	3972	10820
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10822	31.433	NaN	3156.7	30	0	731.79	0.106	+			19653	KDLLEVSK	8	52	466.2762608774558	NaN	0	466.2760925292969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KDLLEVSK_	LMOD1|p.P499S|1|0.27|ENSG00000163431|chr1:201899518-201899518|G/A|missense_variant	44.116797842482775	1.7418937515398478	5				NaN	NaN	0	NaN	6848	3972	10820
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10823	31.435	NaN	1613.6	30	0	364.31	0.034	+			25924	LSGTVAALLAG	11	47	486.7892386019661	971.5639242707322	2	486.78955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSGTVAALLAG_	ANKRD50|p.G1144Wfs*12|1|0.39|ENSG00000151458|chr4:124669847-124669848|-/A|frameshift_variant;ANKRD50|p.N1088Mfs*6|1|0.42|ENSG00000151458|chr4:124670014-124670014|T/-|frameshift_variant;ANKRD50|p.P1235Hfs*8|2|0.36|ENSG00000151458|chr4:124669573-124669573|G/-|frameshift_variant;ENSG00000151458|ENST00000504087|ANKRD50;nc|ENSG00000151458|Q9ULJ7-2|ANKRD50	60.97194046774394	0.3147792151722205	5				NaN	NaN	0	NaN	6849	3972	10820
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10841	31.473	NaN	21024	30	0	3241	0.214	+			45481	TYDKGYQF	8	75	511.23456742470006	1020.4545819162001	2	511.2348937988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TYDKGYQF_	ENSG00000139197|ENST00000675855|PEX5;nc|ENSG00000139197|P50542-2|PEX5;nc|ENSG00000139197|P50542-3|PEX5;nc|ENSG00000139197|P50542-4|PEX5	87.75429964447693	0.2842685068779738	5				NaN	NaN	0	NaN	6864	3975	10840
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10842	31.476	NaN	1008.7	30	0	65.779	0.036			+	-1	VTPAGMAQLVP	11	52	550.2932739257812	NaN	0	550.2932739257812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_VTPAGM(Oxidation (M))AQLVP_	REV__ENST00000372073.5_1_X:109246940-109247138:+|nuORF	32.81241826257853	0.4191849651971536	5				NaN	NaN	0	NaN	6865	3975	10840
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10860	31.513	NaN	7903.2	30	0	1997.8	0.214				-1	 	0	62	450.26296188551197	898.511370837824	2	450.26318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6880	3978	10859
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10861	31.516	NaN	935.91	30	0	223.05	0.106	+			25541	LPVAKDVSY	9	37	496.27631735276486	990.5380817723297	2	496.2759094238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LPVAKDVSY_	ENSG00000169764|ENST00000337130|UGP2;ENST00000475550.5_1_2:64069329-64114799:+|nuORF;nc|ENSG00000169764|Q16851-2|UGP2;UGP2|p.N469Kfs*16|1|0.3|ENSG00000169764|chr2:63890166-63890167|-/A|frameshift_variant;UGP2|p.N469Mfs*4|1|0.39|ENSG00000169764|chr2:63890167-63890167|A/-|frameshift_variant	41.42661286455405	0.403525789677298	5				NaN	NaN	0	NaN	6881	3978	10859
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10862	31.518	NaN	779.34	30	0	95.147	0.035				-1	LFPECHLT	8	40	508.7459411621094	NaN	0	508.7459411621094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LFPEC(Carbamidomethyl (C))HLT_	ENST00000465436.5_1_3:4855999-4856038:-|nuORF	33.51558372728122	1.7418937515398478	5				NaN	NaN	0	NaN	6882	3978	10859
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10879	31.554	NaN	2493.7	30	0	698.84	0.142	+			50040	WEEAAHDL	8	63	485.7162281186045	969.417903304009	2	485.71612548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WEEAAHDL_	ENSG00000100380|ENST00000216218|ST13;nc|ENSG00000212789|Q8NFI4|ST13P5;nc|ENSG00000232150|Q8IZP2|ST13P4;ST13|p.G306Efs*50|1|0.18|ENSG00000100380|chr22:40827160-40827160|C/-|frameshift_variant	63.30626980617807	0.4690498839812213	5				NaN	NaN	0	NaN	6896	3981	10878
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10897	31.593	NaN	2315.4	30	0	811.91	0.144	+			196	AALDWVTKK	9	37	344.53405198189375	1030.5803265458812	3	344.5341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AALDWVTKK_	ENSG00000227057|ENST00000374617|WDR46;ENST00000488944.5_1_6:33255341-33255794:-|nuORF	32.81241826257853	0.4965981579233955	5				NaN	NaN	0	NaN	6911	3984	10896
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10913	31.627	NaN	2723.5	30	0	236.15	0.214	+			40654	SVAQVVLSR	9	54	479.7873676110535	957.5601822889071	2	479.78704833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVAQVVLSR_	ENSG00000165272|ENST00000297991|AQP3;ENST00000463983.5_1_9:33443205-33447528:-|nuORF;ENST00000493581.1_1_9:33443725-33447528:-|nuORF;nc|ENSG00000165272|Q92482-2|AQP3	112.2953585152457	0.026655838328212944	5				NaN	NaN	0	NaN	6924	3987	10912
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10914	31.631	NaN	1839.4	30	0	176.86	0.106				-1	 	0	53	462.24153900152027	461.2342625349203	1	462.24139404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6925	3987	10912
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10915	31.633	NaN	3405.6	30	0	794.2	0.106	+			48963	VVGAVVFQK	9	56	473.7894388496962	945.5643247661924	2	473.78912353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVGAVVFQK_	ENSG00000169223|ENST00000303127|LMAN2;ENST00000504071.1_1_5:176759089-176761465:-|nuORF;ENST00000515209.5_1_5:176759089-176761331:-|nuORF	82.30502934623384	0.08758161712619916	5				NaN	NaN	0	NaN	6926	3987	10912
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10916	31.634	NaN	789.21	30	0	102.94	0.106				-1	NLAPALQMCG	10	50	545.7538269115826	NaN	0	545.753662109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_NLAPALQM(Oxidation (M))C(Carbamidomethyl (C))G_	nc|ENSG00000075702|O43379-2|WDR62	34.172542307311794	0.38797011891751465	5				NaN	NaN	0	NaN	6927	3987	10912
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10917	31.636	NaN	787.24	30	0	275.01	0.033			+	32554	QVTRSFKRRR	10	37	445.2708951466303	NaN	0	445.27093505859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QVTRSFKRRR_	REV__CDH18|p.R555K|1|0.46|ENSG00000145526|chr5:19483519-19483519|C/T|missense_variant	16.71738777980365	0.4201028297492154	5				NaN	NaN	0	NaN	6928	3987	10912
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10948	31.704	NaN	2127.4	30	0	482.33	0.214			+	43737	TLAILSSKY	9	52	498.2925604469799	NaN	0	498.29150390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TLAILSSKY_	REV__ENSG00000115827|ENST00000375255|DCAF17;REV__ENST00000468592.5_1_2:172300063-172325523:+|nuORF;REV__ENST00000480855.1_1_2:172299988-172306494:+|nuORF	49.44154591367651	0.21054156626303966	5				NaN	NaN	0	NaN	6953	3993	10947
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10949	31.707	NaN	1283.7	30	0	176.46	0.106	+			50835	YETKTALL	8	50	469.763689630839	937.512826328478	2	469.7633361816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YETKTALL_	ENSG00000100242|ENST00000689035|SUN2;nc|ENSG00000100242|Q9UH99-2|SUN2;nc|ENSG00000100242|Q9UH99-3|SUN2	35.61828744233558	0.6843154725607303	5				NaN	NaN	0	NaN	6954	3993	10947
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10950	31.709	NaN	713.11	30	0	99.822	0.033			+	46759	VGSSLNIAL	9	44	437.2550048828125	NaN	0	437.2550048828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VGSSLNIAL_	REV__ENSG00000213780|ENST00000259895|GTF2H4;REV__ENST00000477288.5_1_6:30876177-30879964:+|nuORF;REV__ENST00000483318.5_1_6:30879748-30879964:+|nuORF	39.252832667884924	0.27938773122138094	5				NaN	NaN	0	NaN	6955	3993	10947
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10967	31.744	NaN	2733.3	30	0	341.91	0.214	+			12668	GEITGEVHM	9	53	486.72649532230713	971.4384377114143	2	486.7271423339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEITGEVHM_	ENSG00000136068|ENST00000295956|FLNB;ENST00000481470.5_1_3:58118395-58154450:+|nuORF;nc|ENSG00000136068|O75369-2|FLNB;nc|ENSG00000136068|O75369-3|FLNB;nc|ENSG00000136068|O75369-4|FLNB;nc|ENSG00000136068|O75369-5|FLNB;nc|ENSG00000136068|O75369-6|FLNB;nc|ENSG00000136068|O75369-7|FLNB;nc|ENSG00000136068|O75369-8|FLNB;nc|ENSG00000136068|O75369-9|FLNB	68.78682469695295	0.14603441672067394	5				NaN	NaN	0	NaN	6969	3996	10966
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10968	31.748	NaN	3622.8	30	0	1600.7	0.037	+			31765	QPFYHDDSY	9	57	586.2385346644465	1170.462516395693	2	586.238525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QPFYHDDSY_	ENSG00000171223|ENST00000302754|JUNB;JUNB|p.G115Vfs*35|2|0.33|ENSG00000171223|chr19:12792111-12792111|G/-|frameshift_variant;JUNB|p.G126Afs*24|1|0.32|ENSG00000171223|chr19:12792144-12792144|G/-|frameshift_variant;JUNB|p.S28Yfs*7|1|0.17|ENSG00000171223|chr19:12791850-12791853|CTCT/-|frameshift_variant	47.91560031466742	0.327412564698279	5				NaN	NaN	0	NaN	6970	3996	10966
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10982	31.777	NaN	1396.4	30	0	468.51	0.145	+			7906	DSAVDVQEFM	10	42	570.7489684208899	1139.4833839085798	2	570.7498168945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DSAVDVQEFM_	tr|U7T4A7|U7T4A7_FUSNUEnolaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=enoPE=3SV=1	30.568863376406313	0.6301935916953115	5				NaN	NaN	0	NaN	6981	3999	10981
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11000	31.816	NaN	1187.1	30	0	234.48	0.145			+	33451	RIMDYSKFA	9	44	565.7849008747597	1129.5552488163194	2	565.7867431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RIMDYSKFA_	REV__tr|U7STF2|U7STF2_FUSNUDUF1456familyproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01327PE=4SV=1	23.52269567125451	0.5834155526130771	5				NaN	NaN	0	NaN	6996	4002	10999
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11009	31.838	NaN	3920.8	30	0	1881.3	0.214	+			38078	SPSSVSNTF	9	50	463.216920729552	924.419288525904	2	463.21710205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SPSSVSNTF_	ENSG00000145113|ENST00000463781|MUC4;MUC4|p.L3985Ffs*274|1|0.3|ENSG00000145113|chr3:195779627-195779627|G/-|frameshift_variant;MUC4|p.N4902Tfs*8|1|0.37|ENSG00000145113|chr3:195761027-195761027|T/-|frameshift_variant;nc|ENSG00000145113|Q99102-10|MUC4;nc|ENSG00000145113|Q99102-11|MUC4;nc|ENSG00000145113|Q99102-15|MUC4;nc|ENSG00000145113|Q99102-16|MUC4;nc|ENSG00000145113|Q99102-17|MUC4;nc|ENSG00000145113|Q99102-2|MUC4;nc|ENSG00000145113|Q99102-3|MUC4;nc|ENSG00000145113|Q99102-5|MUC4;nc|ENSG00000145113|Q99102-7|MUC4;nc|ENSG00000145113|Q99102-8|MUC4;nc|ENSG00000145113|Q99102-9|MUC4	84.9155231211612	0.07920012719736333	5				NaN	NaN	0	NaN	7002	4005	11008
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11010	31.842	NaN	1239.1	30	0	211.16	0.034			+	23408	LAAPAPPAAPA	11	52	473.77133137245704	945.5281098117141	2	473.7715148925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LAAPAPPAAPA_	REV__ENSG00000166924|ENST00000300179|NYAP1;REV__nc|ENSG00000166924|Q6ZVC0-2|NYAP1;REV__NYAP1|p.R745Gfs*10|1|0.38|ENSG00000166924|chr7:100491057-100491057|C/-|frameshift_variant;REV__NYAP1|p.V572Cfs*2|2|0.43|ENSG00000166924|chr7:100489429-100489429|G/-|frameshift_variant	40.5726180659479	0.5501078856804735	5				NaN	NaN	0	NaN	7003	4005	11008
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11018	31.86	NaN	1913.1	30	0	234.75	0.214			+	38073	SPSSAQPFS	9	57	454.21153394811927	906.4085149630386	2	454.2116394042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SPSSAQPFS_	REV__ENST00000437621.6_1_7:1626575-1627631:+|nuORF;REV__nc|ENSG00000230487|Q96PY0|PSMG3-AS1	45.97224482568171	0.3502073465782774	5				NaN	NaN	0	NaN	7008	4008	11017
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11019	31.864	NaN	895.43	30	0	235.21	0.037			+	-1	SLVIPECPGK	10	31	367.1982023576538	NaN	0	367.1985778808594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SLVIPEC(Carbamidomethyl (C))PGK_	REV__ENST00000268704.6_1_16:89623796-89624147:+|nuORF	32.75053402867276	0.3926392905881664	5				NaN	NaN	0	NaN	7009	4008	11017
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11027	31.882	NaN	3332.3	30	0	872.65	0.214			+	4298	ATGHLVSS	8	37	386.2048664877589	NaN	0	386.20501708984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATGHLVSS_	REV__ENST00000415253.5_1_8:21916870-21927027:+|nuORF;REV__ENST00000517600.5_1_8:21924352-21927027:+|nuORF;REV__ENST00000517804.5_1_8:21914606-21927027:+|nuORF;REV__ENST00000523300.5_1_8:21906721-21927027:+|nuORF	26.79610172149135	1.7418937515398478	5				NaN	NaN	0	NaN	7014	4011	11026
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11028	31.886	NaN	865.82	30	0	58.413	0.106			+	30159	PSEDSSLKWER	11	41	445.21704639956346	NaN	0	445.217041015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PSEDSSLKWER_	REV__RUSC2|p.Q227R|1|0.29|ENSG00000198853|chr9:35547201-35547201|A/G|missense_variant	22.561587123415745	0.456735970842152	5				NaN	NaN	0	NaN	7015	4011	11026
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11029	31.888	NaN	1645.6	30	0	194.56	0.106	+			23328	KYSLIKGNF	9	61	535.3056313514667	1068.5967097697333	2	535.3076782226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KYSLIKGNF_	ENSG00000143546|ENST00000368733|S100A8	49.536043120802724	0.308405419312776	5				NaN	NaN	0	NaN	7016	4011	11026
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11030	31.889	NaN	876.51	30	0	88.778	0.034	+			6891	CLPCLGHL	8	42	485.2365214258368	NaN	0	485.2362365722656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))LPC(Carbamidomethyl (C))LGHL_	ENST00000414624.6_1_11:61645294-61658904:-|nuORF	43.626045697637714	1.7418937515398478	5				NaN	NaN	0	NaN	7017	4011	11026
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11045	31.92	NaN	1390.4	30	0	572.25	0.214			+	46950	VKEGLISQY	9	48	518.787924663283	NaN	0	518.7881469726562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VKEGLISQY_	REV__CEP95|p.Q357Rfs*7|1|0.07|ENSG00000258890|chr17:64526113-64526113|C/-|frameshift_variant;REV__ENSG00000258890|ENST00000556440|CEP95	54.776311868738084	0.17377682019723872	5				NaN	NaN	0	NaN	7029	4014	11044
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11046	31.924	NaN	2243.6	30	0	346.76	0.106			+	23592	LAMSPIGTF	9	62	497.7513609665548	NaN	0	497.751220703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))LAM(Oxidation (M))SPIGTF_	REV__ENSG00000166152|ENST00000299191|C16orf78	76.84663266511073	0.08218905260741291	5				NaN	NaN	0	NaN	7030	4014	11044
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11047	31.926	NaN	5261	30	0	731.09	0.039			+	17634	IEKDINKLRK	10	63	419.59439818767044	1255.7613651632114	3	419.9290771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IEKDINKLRK_	REV__tr|U7T609|U7T609_FUSNUPeptidaseM23domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00048PE=4SV=1	49.46582953369473	0.46192220282894864	5				NaN	NaN	0	NaN	7031	4014	11044
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11062	31.957	NaN	1800.6	30	0	116.95	0.143	+			43947	TPDPSRSVF	9	59	503.2539159505308	NaN	0	503.25439453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TPDPSRSVF_	ENSG00000141295|ENST00000290216|SCRN2;ENST00000581645.5_1_17:45915212-45916069:-|nuORF;nc|ENSG00000141295|Q96FV2-2|SCRN2	40.05817265558897	0.275207446262312	5				NaN	NaN	0	NaN	7043	4017	11061
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11076	31.988	NaN	10101	30	0	3400.7	0.214	+			37810	SMLNFLKK	8	58	327.52450021979854	979.5516712595957	3	327.52471923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SMLNFLKK_	ENSG00000086758|ENST00000262854|HUWE1;ENST00000218328.12_1_X:53611240-53681066:-|nuORF;HUWE1|p.R1657Mfs*13|1|0.21|ENSG00000086758|chrX:53585043-53585044|-/A|frameshift_variant;nc|ENSG00000086758|Q7Z6Z7-2|HUWE1;nc|ENSG00000086758|Q7Z6Z7-3|HUWE1	42.47446043378293	0.6409579893742323	5				NaN	NaN	0	NaN	7054	4020	11075
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11077	31.991	NaN	1634.9	30	0	261.86	0.106			+	47129	VLPIRSRY	8	54	502.30538604338517	1002.5962191535704	2	502.304931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VLPIRSRY_	REV__ENSG00000230358|ENST00000424157|SPDYE21	45.9519527083369	0.6193794311207887	5				NaN	NaN	0	NaN	7055	4020	11075
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11078	31.993	NaN	1664.7	30	0	197.82	0.034	+			35712	SDLKVIVM	8	49	460.75966226125036	919.5047715893007	2	460.7591857910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_SDLKVIVM(Oxidation (M))_	ENSG00000109606|ENST00000336812|DHX15	53.351449002276354	0.5676011784961348	5				NaN	NaN	0	NaN	7056	4020	11075
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11095	32.028	NaN	981.95	30	0	160.17	0.214			+	18155	ILPHNSSDL	9	40	498.2621392418661	994.5097255505323	2	498.2626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ILPHNSSDL_	REV__tr|U7SV51|U7SV51_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01516PE=4SV=1	64.20726635412375	0.17854274437659667	5				NaN	NaN	0	NaN	7070	4023	11094
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11096	32.032	NaN	870.96	30	0	208.02	0.106			+	34225	RTFPPGSL	8	43	437.7429504394531	NaN	0	437.7429504394531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RTFPPGSL_	REV__ENST00000294072.8_2_11:61117452-61117836:-|nuORF	44.116797842482775	1.7418937515398478	5				NaN	NaN	0	NaN	7071	4023	11094
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11097	32.034	NaN	1645.9	30	0	158.89	0.106			+	43644	TIRPWLSP	8	59	485.281494140625	NaN	0	485.281494140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TIRPWLSP_	REV__PHF21A|p.N200Tfs*67|2|0.23|ENSG00000135365|chr11:45971129-45971129|T/-|frameshift_variant	35.61828744233558	1.7418937515398478	5				NaN	NaN	0	NaN	7072	4023	11094
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11098	32.036	NaN	1441.8	30	0	381.31	0.106	+			48999	VVGLPNVGK	9	47	441.77396402152823	NaN	0	441.7740173339844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVGLPNVGK_	ENSG00000130119|ENST00000360845|GNL3L	47.91560031466742	0.22105767942158736	5				NaN	NaN	0	NaN	7073	4023	11094
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11099	32.037	NaN	2049.6	30	0	134.88	0.035	+			3780	ATAEVLNIGK	10	54	508.2932276758983	1014.5719024185967	2	508.2931823730469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATAEVLNIGK_	ENSG00000128050|ENST00000512576|PAICS;ENST00000510584.1_1_4:57302478-57308067:+|nuORF;nc|ENSG00000128050|P22234-2|PAICS	70.8162118820467	0.27065172005956	5				NaN	NaN	0	NaN	7074	4023	11094
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11117	32.074	NaN	2162.2	30	0	173.54	0.214	+			27226	MEKIQPAL	8	59	465.259926581809	928.505300230418	2	465.2596130371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MEKIQPAL_	ENSG00000123349|ENST00000334478|PFDN5;ENST00000552341.5_1_12:53691573-53693126:+|nuORF;ENST00000553171.1_1_12:53691669-53691972:+|nuORF;nc|ENSG00000123349|Q99471-3|PFDN5	71.87747018426188	0.391254423828572	5				NaN	NaN	0	NaN	7089	4026	11116
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11118	32.078	NaN	540.83	30	0	161.26	0.033				-1	LSTGSVCF	8	31	435.7031720023574	869.3917910715148	2	435.7034912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LSTGSVC(Carbamidomethyl (C))F_	ENSG00000101052|ENST00000373030|IFT52;ENST00000467024.5_1_20:42242523-42252704:+|nuORF;ENST00000468420.5_1_20:42242544-42246918:+|nuORF	20.481830146152948	0.8005983782650069	5				NaN	NaN	0	NaN	7090	4026	11116
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11132	32.107	NaN	2088.4	30	0	825.02	0.144			+	31692	QNLIPLREE	9	45	556.3103915980279	1110.6062302628557	2	556.3124389648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QNLIPLREE_	REV__ENSG00000147872|ENST00000276914|PLIN2;REV__ENST00000417868.1_1_1:153825491-153825668:-|nuORF;REV__PLIN2|p.V348*|1|0.15|ENSG00000147872|chr9:19116520-19116520|C/-|frameshift_variant	23.52269567125451	0.5834155526130771	5				NaN	NaN	0	NaN	7101	4029	11131
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11145	32.136	NaN	14811	30	0	3215.1	0.214	+			6144	AVQEFGLAR	9	63	495.7718277252491	989.5291025172983	2	495.7722473144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVQEFGLAR_	ENSG00000169230|ENST00000303204|PRELID1;nc|ENSG00000169230|Q9Y255-2|PRELID1	163.1509380574825	0.003936019289634439	5				NaN	NaN	0	NaN	7111	4032	11144
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11146	32.14	NaN	3411.5	30	0	684.69	0.106	+			7378	DDSAFKKI	8	66	462.24510976126265	922.4756665893253	2	462.24493408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DDSAFKKI_	ENSG00000172915|ENST00000379939|NBEA;NBEA|p.V2250Lfs*10|1|0.36|ENSG00000172915|chr13:35550967-35550967|A/-|frameshift_variant;nc|ENSG00000172915|Q8NFP9|NBEA	68.78682469695295	0.41700713582915416	5				NaN	NaN	0	NaN	7112	4032	11144
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11147	32.142	NaN	2828.2	30	0	1008.2	0.106			+	48244	VTDDAMQSI	9	53	490.22333002459806	978.4321071159961	2	490.2240295410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTDDAMQSI_	REV__ENSG00000148187|ENST00000344641|MRRF;REV__ENST00000435941.1_1_X:122250823-122251621:-|nuORF;REV__nc|ENSG00000148187|Q96E11-3|MRRF;REV__nc|ENSG00000148187|Q96E11-8|MRRF	77.31757898189308	0.1091473830098891	5				NaN	NaN	0	NaN	7113	4032	11144
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11148	32.144	NaN	1432.7	30	0	112.1	0.036	+			16314	HEIEALKSF	9	57	537.2842905199934	1072.5540281067867	2	537.7877197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HEIEALKSF_	ENSG00000078618|ENST00000352171|NRDC;nc|ENSG00000078618|O43847-2|NRDC	75.04331003522576	0.118981335847003	5				NaN	NaN	0	NaN	7114	4032	11144
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11172	32.199	NaN	908.83	30	0	84.549	0.214	+			27610	MPNSPAPHF	9	44	499.2316952663421	996.4488375994842	2	499.2317199707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MPNSPAPHF_	ENSG00000112297|ENST00000633556|CRYBG1;nc|ENSG00000112297|Q9Y4K1-1|CRYBG1	45.97224482568171	0.3502073465782774	5				NaN	NaN	0	NaN	7132	4038	11171
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11173	32.202	NaN	1129.6	30	0	308.93	0.106			+	13873	GQYLLGAALG	10	47	481.77039453961015	961.5262361460203	2	481.7703552246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GQYLLGAALG_	REV__ENSG00000162461|ENST00000294454|SLC25A34	76.84663266511073	0.2213837019327327	5				NaN	NaN	0	NaN	7133	4038	11171
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11174	32.204	NaN	1333.6	30	0	550.52	0.106			+	-1	GSIMLGRA	8	41	410.7193734582572	819.4241939833145	2	411.2204895019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_GSIM(Oxidation (M))LGRA_	REV__L1MC5_dup2219|chr2:240616384-240616624:-|1.426517432550395|0.100608666825259|3.83|456.0|12|3|anti-sense	31.954861631926434	0.7126016770032289	5				NaN	NaN	0	NaN	7134	4038	11171
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11175	32.206	NaN	1803.5	30	0	95.726	0.106				-1	 	0	63	631.0302762135492	1890.0689992408475	3	631.029541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7135	4038	11171
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11176	32.208	NaN	2737.8	30	0	750.71	0.033	+			3276	ASLPLAVTK	9	47	450.2813126385679	898.5480723439358	2	450.2813720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASLPLAVTK_	ENSG00000160796|ENST00000450053|NBEAL2;nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2;nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2	58.22992032128504	0.22837015374068087	5				NaN	NaN	0	NaN	7136	4038	11171
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11190	32.237	NaN	1566.1	30	0	275.58	0.214			+	42188	TAAAVRLPL	9	42	456.2871247772342	910.5596966212685	2	456.28704833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAAAVRLPL_	REV__BACE2|p.P102Rfs*25|3|0.35|ENSG00000182240|chr21:41168562-41168562|C/-|frameshift_variant;REV__ENSG00000182240|ENST00000330333|BACE2;REV__nc|ENSG00000182240|Q9Y5Z0-2|BACE2;REV__nc|ENSG00000182240|Q9Y5Z0-3|BACE2	27.882242232435846	0.5426732730940306	5				NaN	NaN	0	NaN	7147	4041	11189
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11191	32.24	NaN	1291.1	30	0	133.95	0.036			+	35259	SALITCHLAH	10	49	533.2790539849432	1064.5435550366863	2	533.2794189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SALITCHLAH_	REV__ENSG00000138663|ENST00000264389|COPS4;REV__nc|ENSG00000138663|Q9BT78-2|COPS4	21.9598887501803	0.7004979571547932	5				NaN	NaN	0	NaN	7148	4041	11189
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11208	32.275	NaN	2369.3	30	0	571.32	0.214	+			15005	GTNALLVVK	9	54	457.7869262488729	913.5592995645458	2	457.7867431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTNALLVVK_	ENSG00000006712|ENST00000221265|PAF1;nc|ENSG00000006712|Q8N7H5-2|PAF1;nc|ENSG00000006712|Q8N7H5-3|PAF1	101.25262130126117	0.03792372629710479	5				NaN	NaN	0	NaN	7162	4044	11207
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11209	32.279	NaN	1582.6	30	0	155.38	0.035				-1	YFTQGSSVC	9	59	524.7239276111745	1047.433302289149	2	524.7243041992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_YFTQGSSVC(Carbamidomethyl (C))_	ENST00000366591.4_1_1:236305922-236343463:+|nuORF	37.15910966729921	0.4535818937225704	5				NaN	NaN	0	NaN	7163	4044	11207
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11225	32.312	NaN	2294.5	30	0	625.32	0.214			+	26278	LSTQLSKM	8	51	454.2494190213161	NaN	0	454.2494812011719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSTQLSKM_	REV__ENSG00000162341|ENST00000294309|TPCN2;REV__ENST00000442692.2_1_11:68822646-68853210:+|nuORF;REV__ENST00000535009.5_1_11:68816453-68846494:+|nuORF;REV__TPCN2|p.G597Wfs*6|1|0.39|ENSG00000162341|chr11:69085234-69085235|-/T|frameshift_variant;REV__TPCN2|p.R704Afs*17|1|0.1|ENSG00000162341|chr11:69087132-69087132|C/-|frameshift_variant	47.657333605630114	1.7418937515398478	5				NaN	NaN	0	NaN	7176	4047	11224
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11226	32.315	NaN	2989.6	30	0	867.09	0.106	+			31041	QEVLIKTV	8	51	465.28720063477743	928.5598483363549	2	465.28631591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QEVLIKTV_	nc|ENSG00000198788|Q02817|MUC2	45.97224482568171	0.6192535143389125	5				NaN	NaN	0	NaN	7177	4047	11224
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11227	32.317	NaN	2279.8	30	0	718.68	0.035	+			45039	TVGEVFYTK	9	60	522.2741541116875	1042.533755290175	2	522.2738037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVGEVFYTK_	ENSG00000204385|ENST00000229729|SLC44A4;nc|ENSG00000204385|Q53GD3-3|SLC44A4;SLC44A4|p.F618Sfs*25|1|0.43|ENSG00000204385|chr6:31864889-31864889|A/-|frameshift_variant;SLC44A4|p.G398Afs*7|1|0.29|ENSG00000204385|chr6:31869197-31869197|G/-|frameshift_variant;SLC44A4|p.N144Kfs*55|2|0.31|ENSG00000204385|chr6:31874757-31874758|-/T|frameshift_variant;SLC44A4|p.S619Lfs*9|1|0.31|ENSG00000204385|chr6:31864888-31864889|-/A|frameshift_variant	36.446750945000026	0.4619375763483977	5				NaN	NaN	0	NaN	7178	4047	11224
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11244	32.352	NaN	1786.5	30	0	316.67	0.215	+			5546	AVALPLQTK	9	43	470.79521509514933	939.5758772570987	2	470.7955017089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVALPLQTK_	ENSG00000171566|ENST00000499023|PLRG1;ENST00000512719.5_1_4:155467261-155471460:-|nuORF;nc|ENSG00000171566|O43660-2|PLRG1	37.15910966729921	0.4535818937225704	5				NaN	NaN	0	NaN	7192	4050	11243
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11245	32.356	NaN	1028.6	30	0	137.35	0.036	+			19938	KEFIKIVEA	9	51	538.8219103900067	NaN	0	538.8222045898438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEFIKIVEA_	ENSG00000198898|ENST00000361183|CAPZA2;ENST00000426421.5_1_7:116544367-116557918:+|nuORF	35.17822180527639	0.29995959445402404	5				NaN	NaN	0	NaN	7193	4050	11243
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11259	32.385	NaN	1961.1	30	0	218.86	0.143	+			35311	SAMKAVTEL	9	52	475.2550292755061	948.4955056178122	2	475.2550354003906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAMKAVTEL_	ENSG00000128245|ENST00000248975|YWHAH	72.87924865735499	0.12833875048249987	5				NaN	NaN	0	NaN	7204	4053	11258
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11297	32.474	NaN	2842.8	30	0	786.5	0.214	+			44804	TTQVVGILK	9	51	479.8000969483587	957.5856409635174	2	479.80029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTQVVGILK_	ENSG00000198898|ENST00000361183|CAPZA2;ENST00000426421.5_1_7:116544367-116557918:+|nuORF	54.722347961057174	0.257609425301511	5				NaN	NaN	0	NaN	7233	4062	11296
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11298	32.477	NaN	1553.6	30	0	401.48	0.034			+	29789	PINKDLLM	8	49	472.2676801708886	942.5208074085772	2	472.2679748535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PINKDLLM_	REV__DAPK2|p.P226Lfs*17|1|0.2|ENSG00000035664|chr15:63926076-63926076|G/-|frameshift_variant;REV__ENSG00000035664|ENST00000457488|DAPK2;REV__ENST00000558482.5_1_15:64221904-64332460:-|nuORF;REV__ENST00000559007.5_1_15:64204043-64263759:-|nuORF;REV__nc|ENSG00000035664|Q9UIK4-2|DAPK2	35.61828744233558	0.6843154725607303	5				NaN	NaN	0	NaN	7234	4062	11296
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11309	32.501	NaN	4080.4	30	0	559.33	0.214	+			38833	SSNIFTVAK	9	58	483.76599496833427	965.5174370034686	2	483.7664794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSNIFTVAK_	ENSG00000100280|ENST00000357586|AP1B1;ENST00000482818.1_1_22:29726183-29727937:-|nuORF;nc|ENSG00000100280|Q10567-2|AP1B1;nc|ENSG00000100280|Q10567-3|AP1B1;nc|ENSG00000100280|Q10567-4|AP1B1	104.42354056486148	0.0346881550498418	5				NaN	NaN	0	NaN	7242	4065	11308
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11310	32.505	NaN	944.28	30	0	209.59	0.106	+			13979	GSATSLVFK	9	37	455.25518772739014	908.4958225215803	2	455.2557678222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSATSLVFK_	ENSG00000227345|ENST00000616448|PARG;PARG|p.D904Tfs*4|1|0.16|ENSG00000227345|chr10:49820231-49820231|C/-|frameshift_variant;PARG|p.N277Mfs*5|3|0.4|ENSG00000227345|chr10:49933618-49933618|T/-|frameshift_variant	30.317721548370564	0.5199124245378496	5				NaN	NaN	0	NaN	7243	4065	11308
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11311	32.507	NaN	784.23	30	0	167.8	0.034			+	27433	MLESSSVAN	9	36	469.21685791015625	NaN	0	469.21685791015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MLESSSVAN_	REV__ENSG00000168813|ENST00000355898|ZNF507;REV__ENST00000586664.1_1_19:32873361-32873986:+|nuORF;REV__ZNF507|p.L875Sfs*7|1|0.15|ENSG00000168813|chr19:32382841-32382842|-/T|frameshift_variant	40.77816245573522	0.2702456086868081	5				NaN	NaN	0	NaN	7244	4065	11308
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11324	32.535	NaN	1609.7	30	0	182.94	0.214	+			9793	ENVQCCII	8	58	489.720923564627	977.427294196054	2	489.7210693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_ENVQC(Carbamidomethyl (C))CII_	HERC5|p.V627I|2|0.25|ENSG00000138646|chr4:88487096-88487096|G/A|missense_variant	60.29395666154354	0.49887135096048313	5				NaN	NaN	0	NaN	7254	4068	11323
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11325	32.538	NaN	2559	30	0	750.23	0.106	+			5150	ATSVITIVK	9	42	466.2945610468074	930.5745691604149	2	466.2940673828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATSVITIVK_	ENSG00000197063|ENST00000357736|MAFG	47.95952297671804	0.32689736945648856	5				NaN	NaN	0	NaN	7255	4068	11323
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11326	32.54	NaN	1528.4	30	0	131.31	0.106	+			50057	WFALLQNL	8	51	502.7809442354452	1003.5473355376904	2	502.7815246582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_WFALLQNL_	ENSG00000058335|ENST00000558480|RASGRF1;nc|ENSG00000058335|Q13972|RASGRF1;RASGRF1|p.L299Yfs*9|1|0.19|ENSG00000058335|chr15:79035193-79035193|A/-|frameshift_variant	65.89745868150666	0.44339748671293633	5				NaN	NaN	0	NaN	7256	4068	11323
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11327	32.542	NaN	1021.7	30	0	138.44	0.106	+			6145	AVQEFGLAR	9	49	495.7718277252491	989.5291025172983	2	495.7713317871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVQEFGLAR_	ENSG00000169230|ENST00000303204|PRELID1;nc|ENSG00000169230|Q9Y255-2|PRELID1	49.536043120802724	0.308405419312776	5				NaN	NaN	0	NaN	7257	4068	11323
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11328	32.544	NaN	559.53	30	0	39.164	0.036			+	32571	QWHLIGIIA	9	46	525.80615234375	NaN	0	525.80615234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QWHLIGIIA_	REV__ENSG00000129636|ENST00000320640|ITFG1;REV__ENST00000567957.1_1_16:47189632-47271941:-|nuORF	42.47446043378293	0.25855550551448697	5				NaN	NaN	0	NaN	7258	4068	11323
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11344	32.577	NaN	8383.4	30	0	1452.9	0.214				-1	 	0	67	485.7997849200122	969.5850169068244	2	485.80010986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7271	4071	11343
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11345	32.581	NaN	999.72	30	0	215.3	0.032			+	23530	LAIAKCLA	8	37	401.74621159435924	NaN	0	401.74639892578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LAIAKCLA_	REV__ENST00000598497.1_1_19:58600016-58601841:-|nuORF	37.028477286268924	1.7418937515398478	5				NaN	NaN	0	NaN	7272	4071	11343
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11377	32.657	NaN	1242.2	30	0	90.738	0.214	+			5330	ATVNEIVLK	9	56	493.79693603515625	NaN	0	493.79693603515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATVNEIVLK_	ARHGEF18-MAPKAP1|1|fusion;ARHGEF18-MAPKAP1|2|fusion;ENSG00000119487|ENST00000265960|MAPKAP1;ENST00000497932.5_1_9:128201168-128209649:-|nuORF;nc|ENSG00000119487|Q9BPZ7-2|MAPKAP1;nc|ENSG00000119487|Q9BPZ7-3|MAPKAP1;nc|ENSG00000119487|Q9BPZ7-4|MAPKAP1	104.0567914643314	0.015064339666778382	5				NaN	NaN	0	NaN	7295	4080	11376
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11378	32.661	NaN	2141.1	30	0	237.4	0.034	+			47222	VMGLWSGII	9	57	488.2709961660598	974.5274393989196	2	488.27130126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VMGLWSGII_	ENSG00000142494|ENST00000270570|SLC47A1;nc|ENSG00000142494|Q96FL8-3|SLC47A1	33.51558372728122	0.4900267029546261	5				NaN	NaN	0	NaN	7296	4080	11376
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11394	32.693	NaN	10060	30	0	1292.8	0.214				-1	 	0	64	453.7554056541738	905.4962583751476	2	453.7554931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7309	4083	11393
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11395	32.697	NaN	1540.3	30	0	175.82	0.033	+			47867	VSLGLAVSK	9	56	437.2738390314032	872.5331251296064	2	437.2734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSLGLAVSK_	ENSG00000018869|ENST00000586929|ZNF582;ENSG00000197302|ENST00000316491|KRBOX5;ENSG00000197566|ENST00000311331|ZNF624;ENST00000529943.6_1_16:31724760-31765604:+|nuORF;ENST00000534277.5_1_16:31724760-31767037:+|nuORF;ENST00000579983.1_1_17:16534952-16537956:-|nuORF;ZNF624|p.I325Nfs*9|1|0.21|ENSG00000197566|chr17:16623912-16623913|-/T|frameshift_variant;ZNF624|p.I325Sfs*167|1|0.46|ENSG00000197566|chr17:16623913-16623913|T/-|frameshift_variant;ZNF624|p.K498Nfs*74|1|0.49|ENSG00000197566|chr17:16623392-16623392|T/-|frameshift_variant;ZNF624|p.K666Nfs*130|1|0.46|ENSG00000197566|chr17:16622888-16622888|T/-|frameshift_variant;ZNF624|p.K787Ifs*14|1|0.11|ENSG00000197566|chr17:16622526-16622527|-/ATAAATGTAATGAA|frameshift_variant	78.26377905018397	0.10505600812668463	5				NaN	NaN	0	NaN	7310	4083	11393
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11409	32.726	NaN	758.66	30	0	95.75	0.143	+			27649	MPSASMTRL	9	39	497.2466125488281	NaN	0	497.2466125488281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MPSASMTRL_	ENSG00000104419|ENST00000323851|NDRG1;ENST00000519278.5_1_8:134251123-134266883:-|nuORF;nc|ENSG00000103034|Q9ULP0-2|NDRG4;nc|ENSG00000103034|Q9ULP0-3|NDRG4;nc|ENSG00000103034|Q9ULP0-5|NDRG4;nc|ENSG00000103034|Q9ULP0-6|NDRG4;nc|ENSG00000103034|Q9ULP0-7|NDRG4;nc|ENSG00000103034|Q9ULP0-8|NDRG4;nc|ENSG00000104419|Q92597-2|NDRG1;nc|ENSG00000104419|Q92597-3|NDRG1	44.377184641726394	0.24544280798894275	5				NaN	NaN	0	NaN	7321	4086	11408
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11423	32.757	NaN	8237	30	0	2064	0.214	+			24230	LESKGLTL	8	58	430.7577018384878	859.5008507437756	2	430.7579345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LESKGLTL_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;CLCA4|p.S847Kfs*4|1|0.28|ENSG00000016602|chr1:86580120-86580121|-/A|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1;ENSG00000016602|ENST00000370563|CLCA4	74.25504064058377	0.37144338840759816	5				NaN	NaN	0	NaN	7332	4089	11422
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11424	32.761	NaN	2304.3	30	0	269.46	0.106	+			12998	GEVDPKVAL	9	50	464.2607900272447	926.5070271212894	2	464.26055908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEVDPKVAL_	ENSG00000099795|ENST00000215565|NDUFB7;ENST00000593353.5_1_19:14676947-14682853:-|nuORF	58.22992032128504	0.22837015374068087	5				NaN	NaN	0	NaN	7333	4089	11422
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11425	32.763	NaN	2535.7	30	0	342.14	0.106				-1	SECGKAFSL	9	61	499.7341244566338	997.4536959800677	2	499.7341613769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SEC(Carbamidomethyl (C))GKAFSL_	ENSG00000106261|ENST00000324306|ZKSCAN1;ENSG00000186230|ENST00000334181|ZNF749;ENSG00000186272|ENST00000307658|ZNF17;ENSG00000186812|ENST00000330501|ZNF397;ENSG00000198393|ENST00000328654|ZNF26;ENST00000602050.1_1_19:57930944-57932846:+|nuORF;nc|ENSG00000186272|P17021-3|ZNF17;nc|ENSG00000186272|P17021|ZNF17;ZNF852|p.G393S|1|0.24|ENSG00000178917|chr3:44499600-44499600|C/T|missense_variant	90.60085204095205	0.06317133949006545	5				NaN	NaN	0	NaN	7334	4089	11422
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11426	32.765	NaN	1298	30	0	287.99	0.106			+	25565	LQAAQILVP	9	54	476.7949697624623	951.5753865917246	2	476.79498291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LQAAQILVP_	REV__ENSG00000174780|ENST00000642900|SRP72;REV__nc|ENSG00000174780|O76094-2|SRP72	57.81127852772723	0.2318599694398087	5				NaN	NaN	0	NaN	7335	4089	11422
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11427	32.766	NaN	1259.3	30	0	126.15	0.036	+			9297	EHSARYQY	8	64	527.2393309752883	1052.4641090173766	2	527.2403564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EHSARYQY_	PTPRF|p.R1757H|1|0.37|ENSG00000142949|chr1:43620485-43620485|G/A|missense_variant	50.0245360154114	0.5941082100236891	5				NaN	NaN	0	NaN	7336	4089	11422
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11443	32.8	NaN	5759.5	30	0	2615.2	0.214	+			32477	QVMSLGLQK	9	62	502.28392550649454	1002.5532980797891	2	502.2835998535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QVMSLGLQK_	ENST00000314423.11_1_16:69166475-69170710:+|nuORF;ENST00000562237.5_1_16:69166520-69170710:+|nuORF	104.0567914643314	0.03506238181059741	5				NaN	NaN	0	NaN	7349	4092	11442
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11444	32.803	NaN	1616.2	30	0	240.2	0.106			+	28566	NKFTNDLI	8	43	482.7582205389952	963.5018881447904	2	482.7582702636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NKFTNDLI_	REV__tr|U7SKU9|U7SKU9_FUSNUNTEfamilyproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01940PE=4SV=1	35.61828744233558	0.6843154725607303	5				NaN	NaN	0	NaN	7350	4092	11442
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11445	32.805	NaN	2082.7	30	0	349.37	0.106			+	50457	YAEQVQAVF	9	62	527.763901695268	NaN	0	527.7640991210938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YAEQVQAVF_	REV__ENST00000417323.1_1_13:77601239-77601308:-|nuORF	49.44154591367651	0.21054156626303966	5				NaN	NaN	0	NaN	7351	4092	11442
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11446	32.807	NaN	1519.3	30	0	139.93	0.106	+			1710	AGVNFAIAK	9	58	445.75808321503587	889.5016134968718	2	445.7581787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AGVNFAIAK_	ENSG00000138375|ENST00000357276|SMARCAL1	84.9155231211612	0.07920012719736333	5				NaN	NaN	0	NaN	7352	4092	11442
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11447	32.809	NaN	1331.2	30	0	112.66	0.106	+			28294	NECGKAFSL	9	47	513.2393551774603	1024.4641574217205	2	513.239501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_NEC(Carbamidomethyl (C))GKAFSL_	ENSG00000197062|ENST00000421553|ZSCAN26;ENSG00000197782|ENST00000683561|ZNF780A;nc|ENSG00000197062|Q16670-2|ZSCAN26;nc|ENSG00000197062|Q16670|ZSCAN26;nc|ENSG00000197782|O75290-3|ZNF780A	59.93077597824379	0.21419174904018318	5				NaN	NaN	0	NaN	7353	4092	11442
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11448	32.811	NaN	4059.8	30	0	2516.2	0.036	+			17171	HTMEFALVK	9	62	538.2831313938801	1074.5517098545602	2	538.28564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HTMEFALVK_	ENSG00000182636|ENST00000649030|NDN	62.107414245175825	0.1960472003779324	5				NaN	NaN	0	NaN	7354	4092	11442
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11466	32.848	NaN	10476	30	0	3120.1	0.214	+			44832	TTSVITIVK	9	65	481.2998186043136	960.5850842754272	2	481.2998352050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTSVITIVK_	ENSG00000198517|ENST00000343242|MAFK	117.81106730687013	0.02252488733980868	5				NaN	NaN	0	NaN	7369	4095	11465
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11467	32.852	NaN	1456.8	30	0	115.87	0.036	+			39567	STGHVGFIFK	10	55	546.794826103044	1091.5750992728879	2	547.2965698242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STGHVGFIFK_	ENSG00000137575|ENST00000260130|SDCBP;ENST00000523441.1_1_8:59490633-59492419:+|nuORF;nc|ENSG00000137575|O00560-2|SDCBP;nc|ENSG00000137575|O00560-3|SDCBP	45.97224482568171	0.49411383603842696	5				NaN	NaN	0	NaN	7370	4095	11465
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11485	32.888	NaN	5889.8	30	0	1207.5	0.142	+			6288	AVSTFAMVK	9	71	477.2595806805247	952.5046084278495	2	477.2593994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVSTFAMVK_	ENSG00000172893|ENST00000355527|DHCR7;ENST00000534701.1_1_11:71149825-71152361:-|nuORF	77.31757898189308	0.1091473830098891	5				NaN	NaN	0	NaN	7385	4098	11484
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11503	32.925	NaN	120050	30	0	22970	0.149				-1	 	0	84	485.7997849200122	969.5850169068244	2	485.7999267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7400	4101	11502
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11504	32.928	NaN	3083.3	30	0	2105.6	0.106			+	-1	GEAMLKIRI	9	25	349.5387527186641	1045.5944287561924	3	349.5389404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_GEAM(Oxidation (M))LKIRI_	REV__ENSG00000089053|ENST00000261819|ANAPC5;REV__ENST00000536416.5_1_12:121783870-121790143:-|nuORF;REV__ENST00000541652.5_1_12:121773337-121785669:-|nuORF	18.262085536374414	0.6112419832031293	5				NaN	NaN	0	NaN	7401	4101	11502
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11505	32.93	NaN	4343.2	30	0	1622.1	0.038	+			43108	TERDLREVF	9	40	388.8717324781211	1163.5933680345634	3	388.8717041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TERDLREVF_	ENSG00000136527|ENST00000453386|TRA2B;ENSG00000164548|ENST00000297071|TRA2A;ENST00000494255.5_1_7:23547037-23556014:-|nuORF;nc|ENSG00000136527|P62995-3|TRA2B;nc|ENSG00000164548|Q13595-2|TRA2A;nc|ENSG00000164548|Q13595-3|TRA2A;nc|ENSG00000164548|Q13595-4|TRA2A	31.529811441608018	0.5085848003137583	5				NaN	NaN	0	NaN	7402	4101	11502
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11520	32.961	NaN	2248.7	30	0	706.41	0.214	+			39542	STFSSLVAK	9	48	470.26079979346633	938.5070466537327	2	470.2605285644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STFSSLVAK_	ENST00000529306.5_1_11:502127-506619:-|nuORF	52.936696900407355	0.27249468807391813	5				NaN	NaN	0	NaN	7414	4104	11519
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11521	32.965	NaN	719.08	30	0	80.35	0.034			+	26226	LSSLLFPPA	9	37	472.7742192613976	NaN	0	472.7742919921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSSLLFPPA_	REV__ENST00000564587.5_1_15:75628430-75630983:+|nuORF	42.47446043378293	0.25855550551448697	5				NaN	NaN	0	NaN	7415	4104	11519
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11538	33	NaN	2636	30	0	361.6	0.214	+			46463	VETAKVYQL	9	56	525.7953693334787	1049.5761857337573	2	525.7960815429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VETAKVYQL_	ENSG00000137815|ENST00000389629|RTF1;RTF1|p.D528Ifs*12|1|0.29|ENSG00000137815|chr15:41477182-41477182|G/-|frameshift_variant	82.7504851949679	0.08565546331141553	5				NaN	NaN	0	NaN	7429	4107	11537
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11539	33.003	NaN	946.75	30	0	138.25	0.037			+	11439	FLYILEPLGV	10	42	582.3375860193776	NaN	0	582.3367309570312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FLYILEPLGV_	REV__ENST00000392028.8_2_19:40947168-40947366:-|nuORF	17.364965105453717	0.4201028297492154	5				NaN	NaN	0	NaN	7430	4107	11537
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11552	33.031	NaN	1008.5	30	0	184.74	0.144	+			28839	NPSGNLTETY	10	33	548.2522583007812	NaN	0	548.2522583007812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NPSGNLTETY_	ENSG00000196924|ENST00000369850|FLNA;FLNA|p.G2237Efs*109|1|0.28|ENSG00000196924|chrX:154352240-154352240|C/-|frameshift_variant;FLNA|p.Q1716Sfs*23|2|0.38|ENSG00000196924|chrX:154354896-154354896|G/-|frameshift_variant;FLNA|p.R2520Vfs*16|1|0.7|ENSG00000196924|chrX:154349560-154349560|G/-|frameshift_variant;nc|ENSG00000196924|P21333-2|FLNA	58.22992032128504	0.24873293749302264	5				NaN	NaN	0	NaN	7440	4110	11551
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11577	33.089	NaN	4129.9	30	0	2460.6	0.143	+			35505	SATTSPFFK	9	48	493.2532115680078	984.4918702028157	2	493.2535705566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SATTSPFFK_	ENSG00000133961|ENST00000555238|NUMB;nc|ENSG00000133961|P49757-2|NUMB;nc|ENSG00000133961|P49757-3|NUMB;nc|ENSG00000133961|P49757-4|NUMB;nc|ENSG00000133961|P49757-5|NUMB;nc|ENSG00000133961|P49757-6|NUMB;nc|ENSG00000133961|P49757-7|NUMB;nc|ENSG00000133961|P49757-8|NUMB;nc|ENSG00000133961|P49757-9|NUMB	44.377184641726394	0.36891676396732553	5				NaN	NaN	0	NaN	7459	4116	11576
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11589	33.117	NaN	1540.7	30	0	259.54	0.142	+			36476	SEVSKIVTV	9	53	481.28159506456535	960.5486371959307	2	481.2818298339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEVSKIVTV_	ENSG00000163535|ENST00000357799|SGO2;nc|ENSG00000163535|Q562F6-2|SGO2	54.722347961057174	0.257609425301511	5				NaN	NaN	0	NaN	7468	4119	11588
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11616	33.178	NaN	2024.4	30	0	644.32	0.214	+			44955	TVAVPLVGK	9	38	442.28397607780056	882.5533992224011	2	442.28460693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVAVPLVGK_	ENSG00000136986|ENST00000259512|DERL1;nc|ENSG00000136986|Q9BUN8-2|DERL1	44.116797842482775	0.37197099687881774	5				NaN	NaN	0	NaN	7489	4125	11615
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11617	33.182	NaN	2491.4	30	0	396.2	0.033	+			36845	SIFGGAKPV	9	41	438.2529219150306	874.4912908968612	2	438.2530822753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SIFGGAKPV_	ENSG00000063046|ENST00000262056|EIF4B;ENST00000432132.2_1_9:98909238-98910135:+|nuORF;ENST00000432307.1_1_X:110862947-110863739:-|nuORF;nc|ENSG00000063046|P23588-2|EIF4B	58.78195531508484	0.22376836668196862	5				NaN	NaN	0	NaN	7490	4125	11615
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11634	33.217	NaN	11910	30	0	3103	0.141	+			36733	SGVSLAALK	9	59	423.25822503209264	844.5018971309853	2	423.2584533691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SGVSLAALK_	ENSG00000124575|ENST00000244534|H1-3;ENSG00000168298|ENST00000304218|H1-4;ENSG00000187837|ENST00000343677|H1-2	132.757866228626	0.013877640931359021	5				NaN	NaN	0	NaN	7504	4128	11633
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11649	33.249	NaN	4190.2	30	0	1534.1	0.214				-1	ALKQCNREKNR	11	45	472.92069549249106	1415.7402570776733	3	472.9202880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_ALKQC(Carbamidomethyl (C))NREKNR_	ENSG00000106278|ENST00000393386|PTPRZ1;nc|ENSG00000106278|P23471-2|PTPRZ1;nc|ENSG00000106278|P23471-3|PTPRZ1	30.568863376406313	0.6691487505135859	5				NaN	NaN	0	NaN	7516	4131	11648
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11650	33.253	NaN	2201.1	30	0	950.97	0.035			+	27245	MEQIPAFAK	9	50	517.7704958478224	1033.5264387624447	2	517.7703247070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MEQIPAFAK_	REV__ENSG00000056050|ENST00000393381|HPF1	25.57405402267927	0.5642445186134241	5				NaN	NaN	0	NaN	7517	4131	11648
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11668	33.29	NaN	19760	30	0	6333.2	0.214	+			37361	SLFGSPVAK	9	54	453.25787827013556	904.5012036070711	2	453.2584228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLFGSPVAK_	ENSG00000186260|ENST00000571589|MRTFB;nc|ENSG00000186260|Q9ULH7-4|MRTFB;nc|ENSG00000186260|Q9ULH7|MRTFB	85.16082228582465	0.07850854922700509	5				NaN	NaN	0	NaN	7532	4134	11667
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11669	33.294	NaN	3428.4	30	0	404.23	0.034				-1	 	0	65	485.7997849200122	969.5850169068244	2	485.7999572753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7533	4134	11667
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11686	33.329	NaN	25584	30	0	12054	0.143				-1	 	0	73	492.31561065177374	982.6166683703475	2	492.3157958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7547	4137	11685
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11694	33.349	NaN	1363.6	30	0	114.62	0.142	+			1729	AHGRRIKK	8	55	483.31067364052547	NaN	0	483.31072998046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AHGRRIKK_	CATSPERD|p.R751H|1|0.25|ENSG00000174898|chr19:5778531-5778531|G/A|missense_variant	25.450171626174864	1.7418937515398478	5				NaN	NaN	0	NaN	7552	4140	11693
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11709	33.382	NaN	7293	30	0	737.45	0.142	+			42665	TAVTVNQSL	9	50	466.7557765315694	931.4970001299388	2	466.7555236816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAVTVNQSL_	CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000425226.1_1_2:203706028-203706388:-|nuORF;ENST00000550170.5_1_12:53294858-53298765:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	146.78539889680295	0.007618400906539062	5				NaN	NaN	0	NaN	7564	4143	11708
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11723	33.413	NaN	3801.3	30	0	1301.9	0.214	+			4475	ATIRRIDQL	9	34	362.55235233758935	1084.635227612968	3	362.5525817871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATIRRIDQL_	ENSG00000138449|ENST00000261024|SLC40A1;SLC40A1|p.L398Wfs*55|1|0.2|ENSG00000138449|chr2:189563794-189563794|G/-|frameshift_variant	27.882242232435846	0.5426732730940306	5				NaN	NaN	0	NaN	7575	4146	11722
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11724	33.416	NaN	1781.2	30	0	218.89	0.035	+			44871	TTVESLIQK	9	48	509.7920059359763	1017.5694589387526	2	509.7927551269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTVESLIQK_	ENSG00000157107|ENST00000430046|FCHO2;nc|ENSG00000157107|Q0JRZ9-2|FCHO2;nc|ENSG00000157107|Q0JRZ9-3|FCHO2	66.42927471994793	0.16001998865088202	5				NaN	NaN	0	NaN	7576	4146	11722
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11740	33.449	NaN	3062	30	0	901.25	0.214	+			26572	LTTEVHPEL	9	54	519.7766506917417	1037.5387484502833	2	519.7770385742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LTTEVHPEL_	ENSG00000125991|ENST00000348547|ERGIC3;ENST00000486268.5_1_20:34129846-34130758:+|nuORF;nc|ENSG00000125991|Q9Y282-2|ERGIC3;nc|ENSG00000125991|Q9Y282-3|ERGIC3	68.78682469695295	0.14603441672067394	5				NaN	NaN	0	NaN	7589	4149	11739
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11741	33.453	NaN	944.31	30	0	241.08	0.035				-1	LVSGASMVLP	10	46	495.2724609375	NaN	0	495.2724609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LVSGASM(Oxidation (M))VLP_	ENSG00000165282|ENST00000378617|PIGO;ENST00000465745.6_1_9:35090240-35092764:-|nuORF;ENST00000474436.1_1_9:35090976-35092764:-|nuORF	29.14955571784316	0.4044631218331212	5				NaN	NaN	0	NaN	7590	4149	11739
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11759	33.49	NaN	3787	30	0	652.24	0.214	+			48862	VVCVEGIVTK	10	68	552.3099791021882	1102.6054052711763	2	552.31103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_VVC(Carbamidomethyl (C))VEGIVTK_	ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3	96.66504779109242	0.09291513985748291	5				NaN	NaN	0	NaN	7605	4152	11758
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11760	33.493	NaN	1253.1	30	0	176.63	0.106	+			44878	TTVLSAGVTGI	11	50	509.7920059359763	1017.5694589387526	2	510.29364013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTVLSAGVTGI_	ENSG00000205592|ENST00000454784|MUC19;nc|ENSG00000205592|Q7Z5P9-2|MUC19	37.81151784470057	0.5878881669006212	5				NaN	NaN	0	NaN	7606	4152	11758
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11761	33.495	NaN	804.89	30	0	139.39	0.034	+			48186	VTAERLEP	8	36	457.7503662109375	NaN	0	457.7503662109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTAERLEP_	ENSG00000080031|ENST00000376350|PTPRH;ENST00000588559.5_1_19:55705613-55720813:-|nuORF;nc|ENSG00000080031|Q9HD43-2|PTPRH;nc|ENSG00000080031|Q9HD43-3|PTPRH;PTPRH|p.N460Kfs*60|1|0.11|ENSG00000080031|chr19:55200276-55200277|-/T|frameshift_variant	23.04248740728303	1.7418937515398478	5				NaN	NaN	0	NaN	7607	4152	11758
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11778	33.53	NaN	2371.8	30	0	800.82	0.214	+			44956	TVAVPLVGK	9	55	442.28397607780056	882.5533992224011	2	442.28448486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVAVPLVGK_	ENSG00000136986|ENST00000259512|DERL1;nc|ENSG00000136986|Q9BUN8-2|DERL1	47.657333605630114	0.33044192980041115	5				NaN	NaN	0	NaN	7621	4155	11777
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11779	33.533	NaN	1444.4	30	0	252.11	0.106	+			40769	SVDKSVIVY	9	53	505.2819172152798	1008.5492814973596	2	505.2820129394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVDKSVIVY_	ENSG00000196151|ENST00000359774|WDSUB1	44.377184641726394	0.36891676396732553	5				NaN	NaN	0	NaN	7622	4155	11777
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11780	33.535	NaN	1685.1	30	0	77.927	0.05				-1	 	0	59	669.6949781894683	2006.0631051686048	3	670.0279541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7623	4155	11777
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11796	33.568	NaN	2308.8	30	0	239.62	0.143	+			42559	TASESSYQL	9	55	493.22748003789593	984.4404071425919	2	493.2279052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TASESSYQL_	ENSG00000137501|ENST00000359152|SYTL2;nc|ENSG00000137501|Q9HCH5-12|SYTL2;nc|ENSG00000137501|Q9HCH5-13|SYTL2;nc|ENSG00000137501|Q9HCH5-14|SYTL2;nc|ENSG00000137501|Q9HCH5-2|SYTL2;nc|ENSG00000137501|Q9HCH5-7|SYTL2;nc|ENSG00000137501|Q9HCH5-8|SYTL2;nc|ENSG00000137501|Q9HCH5-9|SYTL2;nc|ENSG00000137501|Q9HCH5|SYTL2;SYTL2|p.Q663Tfs*35|1|0.14|ENSG00000137501|chr11:85709344-85709345|-/T|frameshift_variant	95.81516180277367	0.04847050768394289	5				NaN	NaN	0	NaN	7636	4158	11795
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11826	33.635	NaN	1863.1	30	0	240.52	0.214	+			28410	NESSVLHTL	9	60	500.2597326749887	998.5049124167774	2	500.25946044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NESSVLHTL_	ENSG00000196535|ENST00000527372|MYO18A;nc|ENSG00000196535|Q92614-2|MYO18A;nc|ENSG00000196535|Q92614-3|MYO18A;nc|ENSG00000196535|Q92614-4|MYO18A	60.11826168202944	0.21262886028301267	5				NaN	NaN	0	NaN	7660	4164	11825
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11827	33.639	NaN	1565.6	30	0	126.2	0.106			+	49418	VVVAVGLLGG	10	53	442.28397607780056	882.5533992224011	2	442.2892761230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVVAVGLLGG_	REV__ENST00000282096.8_1_11:14665308-14793517:+|nuORF	65.89745868150666	0.31220354485832413	5				NaN	NaN	0	NaN	7661	4164	11825
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11828	33.641	NaN	800.2	30	0	34.83	0.035	+			16286	HEGLVLTKL	9	50	505.3065185546875	NaN	0	505.3065185546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HEGLVLTKL_	ENSG00000149932|ENST00000279396|TMEM219	44.377184641726394	0.24544280798894275	5				NaN	NaN	0	NaN	7662	4164	11825
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11846	33.678	NaN	5656.3	30	0	1787	0.142	+			25851	LSESGVSVK	9	53	453.24915002016473	904.4837471071295	2	453.249755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSESGVSVK_	ATP2C2|p.Y727Tfs*11|2|0.26|ENSG00000064270|chr16:84459146-84459146|T/-|frameshift_variant;ENSG00000064270|ENST00000262429|ATP2C2;nc|ENSG00000064270|O75185-2|ATP2C2;nc|ENSG00000064270|O75185-3|ATP2C2	68.78682469695295	0.14603441672067394	5				NaN	NaN	0	NaN	7677	4167	11845
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11860	33.709	NaN	5775.4	30	0	2054.1	0.214	+			45436	TVYEEMMAK	9	65	551.2505453254093	1100.4865377176186	2	551.251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVYEEMMAK_	ENSG00000144659|ENST00000650617|SLC25A38;SLC25A38|p.G301V|1|0.09|ENSG00000144659|chr3:39396507-39396507|G/T|missense_variant	112.41091882917199	0.026537921851008135	5				NaN	NaN	0	NaN	7688	4170	11859
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11861	33.713	NaN	2951.9	30	0	468.24	0.106	+			5936	AVLIQAGEY	9	59	482.26102924340745	NaN	0	482.2614440917969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVLIQAGEY_	ENSG00000124491|ENST00000264870|F13A1	63.30626980617807	0.13521764763214936	5				NaN	NaN	0	NaN	7689	4170	11859
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11862	33.715	NaN	2133.9	30	0	341.06	0.035	+			20820	KIFSGVFVK	9	56	512.8131371117889	1023.6117212903779	2	512.8134155273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KIFSGVFVK_	ENSG00000146223|ENST00000493763|RPL7L1;ENST00000397415.7_1_6:42848808-42854199:+|nuORF;ENST00000462348.1_1_6:42848614-42854030:+|nuORF;ENST00000530523.1_1_8:42580956-42581139:-|nuORF;nc|ENSG00000146223|Q6DKI1-2|RPL7L1;RPL7L1|p.Q126Pfs*38|1|0.24|ENSG00000146223|chr6:42884698-42884699|-/C|frameshift_variant	85.86182877749512	0.07653218437724067	5				NaN	NaN	0	NaN	7690	4170	11859
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11874	33.74	NaN	3394.1	30	0	793.61	0.143	+			26286	LSTSIYQLI	9	60	519.2973721865833	1036.5801914399665	2	519.2973022460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSTSIYQLI_	ENSG00000139144|ENST00000538779|PIK3C2G;nc|ENSG00000139144|O75747-2|PIK3C2G;PIK3C2G|p.N798Mfs*16|2|0.21|ENSG00000139144|chr12:18488455-18488455|A/-|frameshift_variant	65.80317337860623	0.1652391959156183	5				NaN	NaN	0	NaN	7699	4173	11873
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11888	33.771	NaN	3100.6	30	0	279.82	0.214	+			44105	TPVGLIVSH	9	57	461.77155599666696	921.528559060134	2	461.7711181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TPVGLIVSH_	ENSG00000136718|ENST00000259239|IMP4;ENST00000460766.5_1_2:131100637-131104038:+|nuORF	74.25504064058377	0.12238981753128622	5				NaN	NaN	0	NaN	7710	4176	11887
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11889	33.775	NaN	1553.4	30	0	222.39	0.034			+	10353	ETVGGIALSI	10	54	480.27397736253994	958.5334017918799	2	480.2734069824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ETVGGIALSI_	REV__ENSG00000079134|ENST00000261600|THOC1;REV__ENST00000582313.5_1_18:245829-268019:-|nuORF;REV__nc|ENSG00000079134|Q96FV9-2|THOC1;REV__THOC1|p.D370Mfs*9|1|0.31|ENSG00000079134|chr18:225119-225119|G/-|frameshift_variant;REV__THOC1|p.I431Nfs*6|1|0.23|ENSG00000079134|chr18:224096-224097|-/T|frameshift_variant;REV__THOC1|p.N119Mfs*26|1|0.36|ENSG00000079134|chr18:260205-260205|T/-|frameshift_variant	45.97224482568171	0.49411383603842696	5				NaN	NaN	0	NaN	7711	4176	11887
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11904	33.806	NaN	2074	30	0	357.09	0.144				-1	AVCRGGSRCS	10	53	526.7396747374627	1051.4647965417253	2	526.7403564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_AVCRGGSRC(Carbamidomethyl (C))S_	ENSG00000185753|ENST00000327877|CXorf38;ENST00000378421.1_2_X:40499458-40506772:-|nuORF;ENST00000378426.5_2_X:40506367-40506781:-|nuORF;nc|nan|Q8TB03-3|CXorf38	39.252832667884924	0.5560298534376815	5				NaN	NaN	0	NaN	7723	4179	11903
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11922	33.844	NaN	3996.2	30	0	505.49	0.214	+			35478	SATETCYTY	9	61	519.7078030675293	1037.4010532018585	2	519.7086181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SATETCYTY_	ENSG00000132465|ENST00000254801|JCHAIN	94.00642277110589	0.05356993013874309	5				NaN	NaN	0	NaN	7738	4182	11921
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11923	33.848	NaN	4029.9	30	0	631.37	0.106	+			23478	LAEVGRVL	8	46	428.76632657252395	855.5181002118479	2	428.76654052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LAEVGRVL_	ENSG00000010165|ENST00000361735|METTL13;METTL13|p.L636Pfs*8|1|0.12|ENSG00000010165|chr1:171796557-171796558|-/C|frameshift_variant;nc|ENSG00000010165|Q8N6R0-1|METTL13;nc|ENSG00000010165|Q8N6R0-2|METTL13;nc|ENSG00000010165|Q8N6R0-3|METTL13;nc|ENSG00000010165|Q8N6R0-4|METTL13	108.08749611321984	0.24621691167378246	5				NaN	NaN	0	NaN	7739	4182	11921
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11924	33.85	NaN	1491.6	30	0	235.55	0.106	+			5817	AVIGADSVTLK	11	50	537.314697265625	NaN	0	537.314697265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVIGADSVTLK_	ENSG00000108651|ENST00000261708|UTP6;ENST00000477860.1_1_17:30200326-30200766:-|nuORF	49.46582953369473	0.3191553428975593	5				NaN	NaN	0	NaN	7740	4182	11921
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11925	33.852	NaN	1273	30	0	151.32	0.035			+	-1	YTVLCQKV	8	52	505.7707157730715	NaN	0	505.77056884765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_YTVLC(Carbamidomethyl (C))QKV_	REV__COL12A1|p.Y844C|1|0.18|ENSG00000111799|chr6:75175217-75175217|T/C|missense_variant	31.954861631926434	1.7418937515398478	5				NaN	NaN	0	NaN	7741	4182	11921
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11943	33.888	NaN	2546.1	30	0	270.39	0.214	+			31801	QPMEVQEGY	9	56	540.7367317915068	1079.4589106498136	2	540.7385864257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QPMEVQEGY_	ENSG00000130726|ENST00000253024|TRIM28;ENST00000601150.5_1_19:59059168-59060232:+|nuORF;nc|ENSG00000130726|Q13263-2|TRIM28	77.31757898189308	0.1091473830098891	5				NaN	NaN	0	NaN	7756	4185	11942
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11944	33.892	NaN	559.36	30	0	120.53	0.039				-1	MNRKWICSKP	10	34	660.3366088867188	NaN	0	660.3366088867188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_MNRKWIC(Carbamidomethyl (C))SKP_	ENST00000545363.6_1_12:9809213-9809664:+|nuORF	14.864876125193954	0.4201028297492154	5				NaN	NaN	0	NaN	7757	4185	11942
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11975	33.96	NaN	2169.1	30	0	311.69	0.143	+			50630	YEAVREVL	8	51	489.7661566908748	977.5177604485497	2	489.7658996582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YEAVREVL_	ENSG00000198755|ENST00000322203|RPL10A;ENST00000464112.5_1_6:35436546-35438524:+|nuORF;ENST00000467020.5_1_6:35436211-35436817:+|nuORF;ENST00000472730.1_1_3:61728131-61728755:-|nuORF;ENST00000490335.4_1_6:35436211-35436651:+|nuORF;RPL10A|p.P135Lfs*17|1|0.35|ENSG00000198755|chr6:35470270-35470270|C/-|frameshift_variant	69.6276240434122	0.4100012001731381	5				NaN	NaN	0	NaN	7782	4191	11974
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11986	33.987	NaN	4228.9	30	0	878.77	0.143			+	30080	PQNQELTY	8	53	496.7381343820445	991.461715830889	2	496.7384948730469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PQNQELTY_	REV__ENST00000261609.11_1_15:28538126-28544646:-|nuORF	76.84663266511073	0.3498490246073164	5				NaN	NaN	0	NaN	7790	4194	11985
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12004	34.026	NaN	8749.5	30	0	5411	0.214	+			41288	SVLLFVTKK	9	47	345.55845279116625	1033.6535289736987	3	345.55889892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVLLFVTKK_	ENSG00000198231|ENST00000389924|DDX42;ENST00000578593.1_1_17:61889231-61895755:+|nuORF;nc|ENSG00000198231|Q86XP3-2|DDX42	54.722347961057174	0.257609425301511	5				NaN	NaN	0	NaN	7805	4197	12003
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12005	34.029	NaN	1489.4	30	0	221.36	0.033	+			3047	ASFILGTGK	9	49	447.25808399360585	892.5016150540117	2	447.2584228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASFILGTGK_	CDCA2|p.N847Mfs*14|1|0.15|ENSG00000184661|chr8:25507200-25507200|A/-|frameshift_variant;ENSG00000184661|ENST00000330560|CDCA2;nc|ENSG00000184661|Q69YH5-2|CDCA2	70.8162118820467	0.13725933411854815	5				NaN	NaN	0	NaN	7806	4197	12003
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12022	34.064	NaN	1261.8	30	0	193.65	0.144	+			45253	TVQELAIYK	9	44	532.8032786902801	1063.59200444736	2	532.8042602539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVQELAIYK_	ENSG00000102595|ENST00000376747|UGGT2;nc|ENSG00000102595|Q9NYU1-2|UGGT2;UGGT2|p.N1268Ifs*10|1|0.3|ENSG00000102595|chr13:95859613-95859613|T/-|frameshift_variant	51.19269402634007	0.2889735674168909	5				NaN	NaN	0	NaN	7820	4200	12021
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12035	34.093	NaN	1437.2	30	0	179.02	0.214	+			8476	EASKLVMSY	9	49	514.26123046875	NaN	0	514.26123046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EASKLVMSY_	ENSG00000128641|ENST00000392318|MYO1B;ENSG00000166866|ENST00000300119|MYO1A;ENST00000471904.1_1_2:192128111-192215016:+|nuORF;MYO1B|p.A603Sfs*37|1|0.42|ENSG00000128641|chr2:191390310-191390311|-/A|frameshift_variant;MYO1B|p.F948Cfs*47|1|0.41|ENSG00000128641|chr2:191411140-191411141|-/TG|frameshift_variant;MYO1B|p.S730Afs*4|2|0.4|ENSG00000128641|chr2:191393178-191393178|A/-|frameshift_variant;nc|ENSG00000128641|O43795-2|MYO1B	66.42927471994793	0.121898005645852	5				NaN	NaN	0	NaN	7830	4203	12034
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12036	34.097	NaN	2966	30	0	470.48	0.034	+			47881	VSLGTPIMK	9	53	473.2756896320112	944.5368263308225	2	473.777587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSLGTPIMK_	ECT2|p.K832Rfs*25|1|0.1|ENSG00000114346|chr3:172815693-172815693|A/-|frameshift_variant;ENSG00000114346|ENST00000392692|ECT2;nc|ENSG00000114346|Q9H8V3-2|ECT2;nc|ENSG00000114346|Q9H8V3-3|ECT2;nc|ENSG00000114346|Q9H8V3-4|ECT2	90.36981228632155	0.0638227155548745	5				NaN	NaN	0	NaN	7831	4203	12034
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12051	34.128	NaN	2031.6	30	0	207.29	0.214	+			2808	ARVSCPSPHPS	11	58	569.2771707925868	1136.5397886519736	2	569.2775268554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ARVSCPSPHPS_	ENSG00000005379|ENST00000343736|TSPOAP1;nc|ENSG00000005379|O95153-2|TSPOAP1;nc|ENSG00000005379|O95153-3|TSPOAP1	33.03940026070387	0.6432348334061824	5				NaN	NaN	0	NaN	7843	4206	12050
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12052	34.132	NaN	1559.6	30	0	339.9	0.035	+			42875	TEGYQPPPV	9	41	494.2432420582595	NaN	0	494.24285888671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEGYQPPPV_	ENSG00000108639|ENST00000225777|SYNGR2;ENST00000592456.1_1_17:76167504-76168014:+|nuORF	37.81151784470057	0.28666463014928195	5				NaN	NaN	0	NaN	7844	4206	12050
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12065	34.159	NaN	5647.1	30	0	610.98	0.214	+			35796	SEAKGLVTL	9	63	459.2686312949741	916.5227096567482	2	459.26824951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEAKGLVTL_	ENSG00000070669|ENST00000394308|ASNS;nc|ENSG00000070669|P08243-2|ASNS;nc|ENSG00000070669|P08243-3|ASNS;TRRAP-ASNS|1|fusion;TRRAP-ASNS|2|fusion	106.68306549817024	0.032382560583716295	5				NaN	NaN	0	NaN	7854	4209	12064
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12066	34.163	NaN	2276.2	30	0	401.54	0.033			+	1104	AELITPSH	8	52	434.2321354252937	866.4497179173874	2	434.2317810058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AELITPSH_	REV__ENSG00000005810|ENST00000544440|MYCBP2;REV__MYCBP2|p.N3049*|1|0.11|ENSG00000005810|chr13:77097894-77097895|TT/-|frameshift_variant;REV__MYCBP2|p.P4047Qfs*26|2|0.35|ENSG00000005810|chr13:77067782-77067782|G/-|frameshift_variant;REV__MYCBP2|p.T4311Pfs*37|1|0.14|ENSG00000005810|chr13:77059619-77059619|G/-|frameshift_variant;REV__MYCBP2|p.V3749*|1|0.12|ENSG00000005810|chr13:77081486-77081486|C/-|frameshift_variant;REV__nc|ENSG00000005810|O75592-2|MYCBP2	47.91560031466742	0.6071945918984287	5				NaN	NaN	0	NaN	7855	4209	12064
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12083	34.197	NaN	4429.2	30	0	932.79	0.141	+			5763	AVGLVLPAK	9	49	434.28656266932785	866.5585724054557	2	434.286865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVGLVLPAK_	ENSG00000162496|ENST00000616661|DHRS3;nc|ENSG00000162496|O75911-2|DHRS3	68.484700416344	0.1473408039581241	5				NaN	NaN	0	NaN	7869	4212	12082
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12096	34.226	NaN	3246.7	30	0	419.2	0.143	+			41141	SVIVQPFSK	9	57	502.7926706500855	1003.570788366971	2	502.79217529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVIVQPFSK_	ENSG00000137871|ENST00000267807|ZNF280D;nc|ENSG00000285253|Q6N043-2|ZNF280D;nc|ENSG00000285253|Q6N043-3|ZNF280D;nc|ENSG00000285253|Q6N043-6|ZNF280D	53.08895987439943	0.27122541748218487	5				NaN	NaN	0	NaN	7879	4215	12095
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12107	34.252	NaN	6270.3	30	0	3928	0.215	+			40686	SVASYIAKLV	10	31	350.87771134459877	1049.6113046339963	3	350.8777160644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVASYIAKLV_	tr|U7STA6|U7STA6_FUSNUDNAmismatchrepairproteinMutSOS=FusobacteriumnucleatumCTI-5OX=1316586GN=mutSPE=3SV=1	35.15202426646627	0.5927656479315102	5				NaN	NaN	0	NaN	7887	4218	12106
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12108	34.255	NaN	1867.6	30	0	566.88	0.106	+			38773	SSLYIILKK	9	29	355.56121826171875	NaN	0	355.56121826171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSLYIILKK_	ENSG00000155561|ENST00000285968|NUP205	30.317721548370564	0.32449924987115025	5				NaN	NaN	0	NaN	7888	4218	12106
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12109	34.257	NaN	1233.8	30	0	124.77	0.036	+			28833	NPQNAEVFY	9	53	541.25341796875	NaN	0	541.25341796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NPQNAEVFY_	ENSG00000133858|ENST00000378743|ZFC3H1;nc|ENSG00000133858|O60293-2|ZFC3H1;ZFC3H1|p.L1693Ffs*10|1|0.1|ENSG00000133858|chr12:71619380-71619381|-/A|frameshift_variant	55.50420428727701	0.16876052142120426	5				NaN	NaN	0	NaN	7889	4218	12106
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12119	34.279	NaN	3193.1	30	0	650.17	0.214	+			8175	EAANTMVNY	9	60	506.7239312275406	1011.4333095218813	2	506.7244567871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EAANTMVNY_	ENSG00000011304|ENST00000356948|PTBP1;ENST00000586944.5_1_19:797434-805231:+|nuORF;nc|ENSG00000011304|P26599-1|PTBP1;nc|ENSG00000011304|P26599-2|PTBP1	98.62937762414208	0.04060045538121712	5				NaN	NaN	0	NaN	7896	4221	12118
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12120	34.283	NaN	2869.7	30	0	788.25	0.034	+			42218	TAAHFIEY	8	50	476.23212643203976	950.4496999308795	2	476.2323303222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAAHFIEY_	ENSG00000107443|ENST00000465148|CCNJ;ENST00000450600.1_1_7:56296937-56297204:-|nuORF;nc|ENSG00000107443|Q5T5M9-2|CCNJ;nc|ENSG00000107443|Q5T5M9|CCNJ	35.200714571348534	0.6875396545722289	5				NaN	NaN	0	NaN	7897	4221	12118
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12151	34.35	NaN	1473.4	30	0	119.34	0.214	+			21816	KREDFGFKA	9	56	549.2901285185967	1096.5657041039933	2	549.2910766601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KREDFGFKA_	PIGN|p.G167_A168insFK|1|0.1|ENSG00000197563|chr18:62154592-62154593|-/TTTGAA|inframe_insertion	47.657333605630114	0.33044192980041115	5				NaN	NaN	0	NaN	7922	4227	12150
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12152	34.354	NaN	1542.7	30	0	302.38	0.034	+			41171	SVKPTLLSL	9	48	479.3028844197355	956.591215906271	2	479.3026428222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVKPTLLSL_	ENSG00000083097|ENST00000349129|DOP1A	31.529811441608018	0.5085848003137583	5				NaN	NaN	0	NaN	7923	4227	12150
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12162	34.376	NaN	4961.2	30	0	532.26	0.143	+			8371	EALSLAHTY	9	65	502.7564547453584	1003.4983565575168	2	502.75592041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EALSLAHTY_	ENSG00000151779|ENST00000281513|NBAS;NBAS|p.L1365Ifs*4|1|0.13|ENSG00000151779|chr2:15352075-15352078|AAAG/-|frameshift_variant;NBAS|p.N1064Tfs*12|1|0.31|ENSG00000151779|chr2:15394293-15394293|T/-|frameshift_variant;NBAS|p.Y1476Mfs*33|1|0.28|ENSG00000151779|chr2:15328234-15328234|A/-|frameshift_variant;nc|ENSG00000151779|A2RRP1-2|NBAS	60.97194046774394	0.20551255781574032	5				NaN	NaN	0	NaN	7930	4230	12161
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12189	34.438	NaN	1930.6	30	0	540.13	0.214			+	13245	GILLELAQL	9	50	485.3027943726893	NaN	0	485.30303955078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GILLELAQL_	REV__ENSG00000177427|ENST00000323019|MIEF2;REV__nc|ENSG00000177427|Q96C03-3|MIEF2	38.80614096846853	0.28164298475537564	5				NaN	NaN	0	NaN	7951	4236	12188
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12190	34.441	NaN	1636.5	30	0	544.11	0.036	+			4291	ATGGTFVVKSL	11	48	540.3079985863338	1078.6014442394676	2	540.8118286132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATGGTFVVKSL_	ENSG00000198208|ENST00000557413|RPS6KL1;ENST00000555834.5_1_14:75375979-75389943:-|nuORF;nc|ENSG00000198208|Q9Y6S9-2|RPS6KL1;nc|ENSG00000198208|Q9Y6S9-4|RPS6KL1	22.579656572578934	0.7529490144093228	5				NaN	NaN	0	NaN	7952	4236	12188
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12209	34.487	NaN	5425.5	30	0	658.84	0.214	+			5244	ATVAVPLVGK	10	58	477.8029558354573	953.5913587377146	2	477.8030090332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATVAVPLVGK_	ENSG00000136986|ENST00000259512|DERL1;nc|ENSG00000136986|Q9BUN8-2|DERL1	107.00750918261382	0.05688644658934505	5				NaN	NaN	0	NaN	7965	4242	12208
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12210	34.49	NaN	3461.5	30	0	706.23	0.106	+			47851	VSLDYAISK	9	62	498.2746137154653	994.5346744977306	2	498.2743225097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSLDYAISK_	ENSG00000181220|ENST00000458143|ZNF746;ENSG00000204946|ENST00000434415|ZNF783;ENST00000472212.5_1_7:149248897-149318218:-|nuORF;ENST00000481762.5_1_7:149260692-149318218:-|nuORF;ENST00000486492.5_1_7:149255763-149318218:-|nuORF;ENST00000493198.5_1_7:149316940-149318218:-|nuORF;nc|ENSG00000181220|Q6NUN9-2|ZNF746;nc|ENSG00000181220|Q6NUN9|ZNF746;nc|ENSG00000204946|Q6ZMS7-1|ZNF783	123.20810148215591	0.019257656778428764	5				NaN	NaN	0	NaN	7966	4242	12208
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12211	34.492	NaN	1597.5	30	0	185.56	0.035	+			49257	VVNVSPYLK	9	55	509.80037390524745	1017.5861948772949	2	509.8003845214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVNVSPYLK_	ENSG00000167861|ENST00000425042|HID1;HID1|p.P773Lfs*8|1|0.17|ENSG00000167861|chr17:74951619-74951619|G/-|frameshift_variant;nc|ENSG00000167861|Q8IV36-2|HID1;nc|ENSG00000167861|Q8IV36-3|HID1	43.650786325866115	0.37743712540499297	5				NaN	NaN	0	NaN	7967	4242	12208
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12229	34.53	NaN	3494.8	30	0	1193.4	0.14			+	13113	GGGGGRSGAL	10	38	394.7042584967589	787.3939640603178	2	394.70465087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GGGGGRSGAL_	REV__ENST00000342160.7_2_X:53707007-53711004:-|nuORF	42.396135135203025	0.5270658956260207	5				NaN	NaN	0	NaN	7982	4245	12228
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12246	34.566	NaN	4190	30	0	936.61	0.214	+			38591	SSGDIFLEK	9	61	498.257329569012	994.500106204824	2	498.2561340332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSGDIFLEK_	AP3M2|p.V318Sfs*2|1|0.39|ENSG00000070718|chr8:42167308-42167308|G/-|frameshift_variant;ENSG00000070718|ENST00000396926|AP3M2;nc|ENSG00000070718|P53677-2|AP3M2	101.45984612302182	0.0377122763612125	5				NaN	NaN	0	NaN	7996	4248	12245
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12247	34.57	NaN	1977.5	30	0	335.12	0.036	+			27695	MPVNTNQNF	9	57	532.744783532232	1063.4750141312638	2	532.7455444335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MPVNTNQNF_	ENSG00000136021|ENST00000360820|SCYL2	39.252832667884924	0.4290233611298554	5				NaN	NaN	0	NaN	7997	4248	12245
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12264	34.605	NaN	22387	30	0	6708.7	0.214	+			4244	ATGDMSGLLK	10	77	496.7575336123908	991.5005142915816	2	496.7579040527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATGDMSGLLK_	ENSG00000127837|ENST00000248450|AAMP;ENST00000475678.5_1_2:219131145-219134809:-|nuORF;ENST00000489767.5_1_2:219130391-219134818:-|nuORF	164.45504665044191	0.00544846538291036	5				NaN	NaN	0	NaN	8011	4251	12263
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12265	34.609	NaN	1715.7	30	0	445.42	0.106	+			48448	VTLAAVGEL	9	47	436.75775988084877	871.5009668284976	2	436.75848388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTLAAVGEL_	SIGLEC8|p.G366Efs*18|1|0.16|ENSG00000105366|chr19:51454735-51454735|C/-|frameshift_variant	66.42927471994793	0.16001998865088202	5				NaN	NaN	0	NaN	8012	4251	12263
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12266	34.611	NaN	1820.4	30	0	185.53	0.106			+	47761	VSGQSLGLVY	10	58	511.778824981434	1021.543097029668	2	512.2814331054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSGQSLGLVY_	REV__CUX1|p.A591Qfs*9|1|0.06|ENSG00000257923|chr7:102197181-102197182|-/CAGT|frameshift_variant;REV__CUX1|p.E933Sfs*59|1|0.14|ENSG00000257923|chr7:102202089-102202089|C/-|frameshift_variant;REV__CUX1|p.I1081Sfs*39|2|0.46|ENSG00000257923|chr7:102227471-102227471|C/-|frameshift_variant;REV__CUX2|p.A1430Cfs*11|1|0.26|ENSG00000111249|chr12:111348143-111348144|-/C|frameshift_variant;REV__CUX2|p.L655Sfs*49|1|0.38|ENSG00000111249|chr12:111312159-111312160|-/T|frameshift_variant;REV__CUX2|p.P1429Lfs*23|1|0.33|ENSG00000111249|chr12:111348144-111348144|C/-|frameshift_variant;REV__ENSG00000111249|ENST00000261726|CUX2;REV__ENSG00000257923|ENST00000292535|CUX1;REV__nc|ENSG00000257923|P39880-2|CUX1;REV__nc|ENSG00000257923|P39880-3|CUX1;REV__nc|ENSG00000257923|P39880-4|CUX1;REV__nc|ENSG00000257923|P39880-5|CUX1;REV__nc|ENSG00000257923|P39880-6|CUX1	42.86426827375447	0.522752283233888	5				NaN	NaN	0	NaN	8013	4251	12263
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12267	34.612	NaN	1949.4	30	0	213.93	0.034	+			47052	VLFLFLPD	8	57	482.28143581910024	962.5483187050005	2	482.2804260253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VLFLFLPD_	ENST00000271332.3_1_1:109817672-109818002:+|nuORF	23.036711822280957	0.7814608874307191	5				NaN	NaN	0	NaN	8014	4251	12263
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12282	34.644	NaN	1221.1	30	0	128.1	0.143			+	50336	WVCNLLFK	8	51	511.778824981434	1021.543097029668	2	512.2791137695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WVCNLLFK_	REV__tr|U7SSD2|U7SSD2_FUSNUPyruvate:ferredoxin(Flavodoxin)oxidoreductaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01591PE=3SV=1;REV__tr|U7T780|U7T780_FUSNUPyruvate:ferredoxin(Flavodoxin)oxidoreductaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00146PE=3SV=1	42.47446043378293	0.6409579893742323	5				NaN	NaN	0	NaN	8026	4254	12281
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12300	34.683	NaN	1293.4	30	0	98.415	0.214	+			36483	SEVTAALRV	9	55	473.2717744489983	944.5289959647966	2	473.2708435058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEVTAALRV_	EEF2|p.E241Rfs*13|1|0.26|ENSG00000167658|chr19:3982316-3982316|C/-|frameshift_variant;ENSG00000167658|ENST00000309311|EEF2	67.49366992349736	0.1516260258713357	5				NaN	NaN	0	NaN	8041	4257	12299
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12301	34.687	NaN	3902.8	30	0	357.47	0.106			+	11248	FILFLRRFWWR	11	73	547.3171967113976	1638.9297607343929	3	547.3181762695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FILFLRRFWWR_	REV__ENST00000281830.3_1_2:223918801-223918864:+|nuORF	3.408713201661513	0.8659727860201725	5				NaN	NaN	0	NaN	8042	4257	12299
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12302	34.689	NaN	966.3	30	0	50.743	0.034	+			50355	WVLHGVPR	8	55	482.28143581910024	962.5483187050005	2	482.28131103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_WVLHGVPR_	ENSG00000165695|ENST00000298545|AK8;ENST00000476719.1_1_9:135601077-135753754:-|nuORF;nc|ENSG00000165695|Q96MA6-2|AK8	26.79610172149135	0.7524337208463756	5				NaN	NaN	0	NaN	8043	4257	12299
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12315	34.716	NaN	1317	30	0	131.83	0.142	+			13273	GITLDLIKS	9	55	480.29266357421875	NaN	0	480.29266357421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GITLDLIKS_	ENSG00000147852|ENST00000382100|VLDLR;nc|ENSG00000147852|P98155-2|VLDLR;VLDLR|p.P602H|1|0.4|ENSG00000147852|chr9:2647575-2647575|C/A|missense_variant	44.116797842482775	0.2472372736944149	5				NaN	NaN	0	NaN	8053	4260	12314
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12330	34.749	NaN	1784.7	30	0	200.63	0.142			+	23546	LAKSAVSLPA	10	50	478.79238451765144	955.5702161021029	2	478.79229736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LAKSAVSLPA_	REV__APC2|p.P1892Rfs*104|1|0.27|ENSG00000115266|chr19:1468971-1468971|C/-|frameshift_variant;REV__ENSG00000115266|ENST00000590469|APC2;REV__nc|ENSG00000115266|O95996-2|APC2;REV__nc|ENSG00000115266|O95996-3|APC2	34.172542307311794	0.6007644933930345	5				NaN	NaN	0	NaN	8065	4263	12329
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12355	34.816	NaN	3578.1	30	0	500.59	0.214			+	30182	PSKIGTLLK	9	62	478.810681499535	955.60681006587	2	478.8109130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PSKIGTLLK_	REV__ENSG00000174197|ENST00000703841|MGA;REV__MGA|p.D2578Rfs*45|1|0.32|ENSG00000174197|chr15:41762342-41762343|-/A|frameshift_variant;REV__MGA|p.E1249Rfs*25|2|0.28|ENSG00000174197|chr15:41729243-41729244|-/A|frameshift_variant;REV__MGA|p.E1249Rfs*42|1|0.17|ENSG00000174197|chr15:41729244-41729244|A/-|frameshift_variant;REV__MGA|p.L1297Wfs*39|1|0.3|ENSG00000174197|chr15:41734566-41734566|C/-|frameshift_variant;REV__MGA|p.S2228Kfs*5|1|0.33|ENSG00000174197|chr15:41750284-41750285|-/A|frameshift_variant;REV__MGA|p.T1916Qfs*7|1|0.4|ENSG00000174197|chr15:41749350-41749350|A/-|frameshift_variant;REV__nc|ENSG00000174197|Q8IWI9-3|MGA;REV__nc|ENSG00000174197|Q8IWI9|MGA	74.1650062923329	0.12277912660386392	5				NaN	NaN	0	NaN	8081	4272	12354
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12356	34.819	NaN	634.4	30	0	146.73	0.039			+	27320	MHKKRNSSNAF	11	38	660.3358154296875	NaN	0	660.3358154296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MHKKRNSSNAF_	REV__ZIC1|p.D348N|1|0.14|ENSG00000152977|chr3:147412577-147412577|G/A|missense_variant	23.52269567125451	0.456735970842152	5				NaN	NaN	0	NaN	8082	4272	12354
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12367	34.843	NaN	803.32	30	0	190.86	0.214			+	-1	VAMSVLKGL	9	38	467.2735485427956	NaN	0	467.27386474609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_VAM(Oxidation (M))SVLKGL_	REV__ENSG00000146576|ENST00000344417|INTS15;REV__ENST00000472693.1_1_7:6631414-6634087:+|nuORF;REV__nc|ENSG00000146576|Q96N11-2|INTS15	26.69291269510374	0.34280015626154364	5				NaN	NaN	0	NaN	8090	4275	12366
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12368	34.847	NaN	972.7	30	0	117.17	0.106			+	-1	KMKQKQLK	8	45	524.3199363680646	1046.6253198029292	2	524.3209228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_KM(Oxidation (M))KQKQLK_	REV__ENST00000392455.7_2_3:191112649-191112850:+|nuORF	31.954861631926434	0.7126016770032289	5				NaN	NaN	0	NaN	8091	4275	12366
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12369	34.849	NaN	1003	30	0	425.44	0.037	+			40960	SVFYTIFIP	9	21	362.8661193847656	NaN	0	362.8661193847656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVFYTIFIP_	ENSG00000167825|ENST00000301532|OR5I1;OR5I1|p.Y292*|1|0.03|ENSG00000167825|chr11:55935527-55935528|AA/-|frameshift_variant	21.9598887501803	0.3626577482100488	5				NaN	NaN	0	NaN	8092	4275	12366
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12379	34.871	NaN	1077.2	30	0	137.91	0.142	+			13074	GFLALRCF	8	33	463.7509884725307	NaN	0	463.7509765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GFLALRCF_	ENST00000483551.6_1_15:69082217-69082433:-|nuORF	35.200714571348534	1.7418937515398478	5				NaN	NaN	0	NaN	8099	4278	12378
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12412	34.951	NaN	1064.7	30	0	529.62	0.139			+	48102	VSTPTPVG	8	31	379.2096868828962	NaN	0	379.2098693847656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSTPTPVG_	REV__ENSG00000167522|ENST00000301030|ANKRD11;REV__ENST00000330736.9_1_16:89334888-89371640:-|nuORF	35.200714571348534	1.7418937515398478	5				NaN	NaN	0	NaN	8123	4287	12411
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12458	35.055	NaN	1510.6	30	0	195.26	0.143				-1	GNSALLGCPI	10	45	501.25831185386016	1000.5020707745203	2	501.25811767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GNSALLGC(Carbamidomethyl (C))PI_	ADAMTSL1|p.R1713Gfs*28|1|0.2|ENSG00000178031|chr9:18906864-18906864|C/-|frameshift_variant;ENSG00000178031|ENST00000380548|ADAMTSL1;ENST00000380559.7_1_9:18706652-18908543:+|nuORF;nc|ENSG00000178031|Q8N6G6-5|ADAMTSL1;nc|ENSG00000178031|Q8N6G6-6|ADAMTSL1	37.15910966729921	0.575322462179216	5				NaN	NaN	0	NaN	8160	4296	12457
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12469	35.08	NaN	2921.1	30	0	362.94	0.214	+			28285	NEASVLHNL	9	65	498.7597190479816	995.5048851627632	2	498.75982666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NEASVLHNL_	ENSG00000078814|ENST00000262873|MYH7B;ENSG00000100345|ENST00000216181|MYH9;ENSG00000105357|ENST00000642316|MYH14;ENSG00000133026|ENST00000360416|MYH10;ENSG00000133392|ENST00000300036|MYH11;MYH10|p.A411Pfs*11|1|0.15|ENSG00000133026|chr17:8546562-8546562|T/-|frameshift_variant;MYH14|p.G549Wfs*8|1|0.23|ENSG00000105357|chr19:50250519-50250520|-/C|frameshift_variant;MYH14|p.L1950Sfs*14|1|0.34|ENSG00000105357|chr19:50309646-50309646|C/-|frameshift_variant;MYH14|p.M997*|1|0.19|ENSG00000105357|chr19:50271483-50271483|A/-|frameshift_variant;MYH14|p.P548Lfs*25|2|0.32|ENSG00000105357|chr19:50250520-50250520|C/-|frameshift_variant;MYH14|p.R929Gfs*44|1|0.38|ENSG00000105357|chr19:50268237-50268237|G/-|frameshift_variant;MYH9|p.C91Y|1|0.25|ENSG00000100345|chr22:36348965-36348965|C/T|missense_variant;MYH9|p.I784*|1|0.07|ENSG00000100345|chr22:36304036-36304036|G/-|frameshift_variant;nc|ENSG00000078814|A7E2Y1-2|MYH7B;nc|ENSG00000078814|A7E2Y1|MYH7B;nc|ENSG00000105357|Q7Z406-4|MYH14;nc|ENSG00000105357|Q7Z406-5|MYH14;nc|ENSG00000105357|Q7Z406-6|MYH14;nc|ENSG00000105357|Q7Z406|MYH14;nc|ENSG00000133026|P35580-2|MYH10;nc|ENSG00000133026|P35580-3|MYH10;nc|ENSG00000133026|P35580-5|MYH10;nc|ENSG00000133026|P35580|MYH10;nc|ENSG00000133392|P35749-2|MYH11;nc|ENSG00000133392|P35749-3|MYH11;nc|ENSG00000133392|P35749-4|MYH11	117.81106730687013	0.02252488733980868	5				NaN	NaN	0	NaN	8168	4299	12468
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12470	35.084	NaN	1501.8	30	0	262.6	0.035			+	20026	KEITAEQY	8	51	491.24793933490974	980.4813257366195	2	491.248291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEITAEQY_	REV__ENSG00000004139|ENST00000585482|SARM1;REV__ENST00000379061.8_1_17:26712241-26725107:+|nuORF;REV__ENST00000579593.1_1_17:26723134-26723302:+|nuORF;REV__nc|ENSG00000004139|Q6SZW1-2|SARM1	79.45101966838831	0.3281480470254892	5				NaN	NaN	0	NaN	8169	4299	12468
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12484	35.113	NaN	6282.2	30	0	622.34	0.214	+			4669	ATLQYIVGR	9	66	510.79594033967606	1019.5773277461522	2	510.796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATLQYIVGR_	ENSG00000085377|ENST00000652536|PREP;PREP|p.L670Cfs*20|1|0.16|ENSG00000085377|chr6:105278269-105278269|G/-|frameshift_variant	138.06239232086	0.011389075116295402	5				NaN	NaN	0	NaN	8180	4302	12483
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12485	35.116	NaN	1335.9	30	0	170.5	0.035	+			25466	LPQVQNTAM	9	51	501.25831185386016	1000.5020707745203	2	501.2572021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LPQVQNTAM_	ENSG00000173933|ENST00000310092|RBM4;nc|ENSG00000239306|Q96PK6-5|RBM14	42.396135135203025	0.392153681582562	5				NaN	NaN	0	NaN	8181	4302	12483
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12502	35.152	NaN	2310.2	30	0	203.07	0.215			+	29410	PAVHVQLSY	9	61	507.27483413045826	1012.5351153277165	2	507.2759094238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PAVHVQLSY_	REV__ENSG00000143341|ENST00000271588|HMCN1;REV__HMCN1|p.G3718Afs*6|1|0.04|ENSG00000143341|chr1:186113995-186113995|G/-|frameshift_variant;REV__HMCN1|p.L3491Hfs*10|1|0.12|ENSG00000143341|chr1:186095419-186095420|-/ATAT|frameshift_variant;REV__HMCN1|p.S4801Rfs*11|1|0.07|ENSG00000143341|chr1:186145536-186145537|-/AGAATAA|frameshift_variant;REV__HMCN1|p.Y2955Ifs*3|1|0.29|ENSG00000143341|chr1:186082933-186082934|-/A|frameshift_variant;REV__nc|ENSG00000143341|Q96RW7-2|HMCN1	76.7741389293348	0.11149722112137898	5				NaN	NaN	0	NaN	8195	4305	12501
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12503	35.155	NaN	3182.9	30	0	784.52	0.036	+			34665	RVRNSNNLK	9	63	550.8190521544258	1099.6235513756515	2	550.8206176757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RVRNSNNLK_	ENSG00000131944|ENST00000588258|FAAP24	51.19269402634007	0.2889735674168909	5				NaN	NaN	0	NaN	8196	4305	12501
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12519	35.188	NaN	3899.5	30	0	528.67	0.214	+			10994	FEGKTLVSV	9	66	490.2763967910398	978.5382406488797	2	490.2769470214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FEGKTLVSV_	ENSG00000080824|ENST00000216281|HSP90AA1;ENST00000378770.1_1_4:190394307-190396341:+|nuORF;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000205100|Q58FG1|HSP90AA4P	47.95952297671804	0.32689736945648856	5				NaN	NaN	0	NaN	8209	4308	12518
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12520	35.192	NaN	1418.9	30	0	109.52	0.106				-1	CNNCNCNNCC	10	53	666.6845092773438	NaN	0	666.6845092773438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	4 Carbamidomethyl (C)	_C(Carbamidomethyl (C))NNC(Carbamidomethyl (C))NCNNC(Carbamidomethyl (C))C(Carbamidomethyl (C))_	ENSG00000132749|ENST00000255087|TESMIN	3.159230865173134	0.4201028297492154	5				NaN	NaN	0	NaN	8210	4308	12518
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12521	35.194	NaN	962.09	30	0	76.777	0.106				-1	CIQCLNSIS	9	52	519.2391967773438	NaN	0	519.2391967773438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_C(Carbamidomethyl (C))IQCLNSIS_	ENSG00000103534|ENST00000542583|TMC5;ENST00000567478.5_1_16:19467998-19503571:+|nuORF;nc|ENSG00000103534|Q6UXY8-2|TMC5;nc|ENSG00000103534|Q6UXY8-3|TMC5;nc|ENSG00000103534|Q6UXY8-4|TMC5	37.15910966729921	0.2899585034171616	5				NaN	NaN	0	NaN	8211	4308	12518
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12522	35.195	NaN	1552.3	30	0	121.39	0.036	+			32743	RAPPSPSPLAP	11	55	545.3064712861557	1088.5983896391112	2	545.3070678710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RAPPSPSPLAP_	ENST00000295951.7_1_3:57742468-57743248:+|nuORF	24.519189625965996	0.7326048944360514	5				NaN	NaN	0	NaN	8212	4308	12518
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12545	35.248	NaN	1968.5	30	0	457.13	0.142	+			5553	AVALPVAVGR	10	49	476.8007324447206	951.5869119562412	2	476.8004150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVALPVAVGR_	ENSG00000275395|ENST00000616721|FCGBP;nc|ENSG00000275395|Q9Y6R7|FCGBP	71.29570347882199	0.26673431503403816	5				NaN	NaN	0	NaN	8229	4314	12544
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12561	35.283	NaN	1470.3	30	0	272.84	0.214	+			48340	VTGGIFSVTK	10	54	504.790528751071	1007.566504568942	2	504.7906799316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTGGIFSVTK_	ENSG00000151135|ENST00000280756|TMEM263	43.650786325866115	0.5155049133366767	5				NaN	NaN	0	NaN	8242	4317	12560
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12562	35.286	NaN	1490.2	30	0	271.61	0.034	+			6387	AVVELVTVK	9	47	479.30292896580346	956.5913049984069	2	479.3029479980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVVELVTVK_	ENSG00000182220|ENST00000636580|ATP6AP2;nc|ENSG00000182220|O75787-2|ATP6AP2	65.46538089061403	0.16805504838372562	5				NaN	NaN	0	NaN	8243	4317	12560
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12568	35.301	NaN	3347	30	0	920.82	0.143			+	24648	LGTLLAKGAH	10	58	490.7980124344083	979.5814719356166	2	490.7983093261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LGTLLAKGAH_	REV__ENSG00000183044|ENST00000268251|ABAT;REV__ENST00000566590.5_1_16:8807641-8875284:+|nuORF	29.14955571784316	0.6417842315402807	5				NaN	NaN	0	NaN	8246	4320	12567
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12599	35.377	NaN	2555.9	30	0	288.13	0.144	+			28108	NAFVLDKTY	9	53	535.7791295428653	1069.5437061525306	2	535.7803955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAFVLDKTY_	ENSG00000241945|ENST00000291576|PWP2	56.72105179125745	0.24094814563026265	5				NaN	NaN	0	NaN	8268	4329	12598
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12616	35.415	NaN	3360.9	30	0	429.57	0.214	+			4026	ATDAVGIVLK	10	59	493.7979370811858	985.5813212291716	2	493.79815673828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATDAVGIVLK_	ENSG00000132676|ENST00000368336|DAP3;ENST00000462978.1_1_1:155697409-155701908:+|nuORF;nc|ENSG00000132676|P51398-2|DAP3;nc|ENSG00000132676|P51398-3|DAP3	117.81106730687013	0.030421278947300796	5				NaN	NaN	0	NaN	8282	4332	12615
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12617	35.418	NaN	872.76	30	0	132.76	0.035	+			37081	SISGHVTLY	9	46	488.7586462335357	NaN	0	488.7590637207031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SISGHVTLY_	nc|ENSG00000253409|A0A1B0GX95|TRBV7-4	38.80614096846853	0.28164298475537564	5				NaN	NaN	0	NaN	8283	4332	12615
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12637	35.466	NaN	1144.6	30	0	192.57	0.214			+	38710	SSLAKQLLD	9	49	487.77967853451474	NaN	0	487.77978515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSLAKQLLD_	REV__ENST00000295767.9_1_3:14154259-14154349:-|nuORF	62.107414245175825	0.1403307765918332	5				NaN	NaN	0	NaN	8297	4338	12636
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12638	35.469	NaN	1216.2	30	0	174.42	0.106			+	27967	MVLGWQVRA	9	58	530.2913918941217	NaN	0	530.2915649414062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MVLGWQVRA_	REV__ENSG00000249242|ENST00000449862|TMEM150C	57.81127852772723	0.15865383123342353	5				NaN	NaN	0	NaN	8298	4338	12636
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12639	35.471	NaN	1209.1	30	0	403.78	0.035	+			28735	NNSKNKTLV	9	38	509.28623009094997	NaN	0	509.2873840332031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NNSKNKTLV_	ENSG00000173801|ENST00000393931|JUP	38.753607047826485	0.28190821760017076	5				NaN	NaN	0	NaN	8299	4338	12636
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12650	35.495	NaN	1724.8	30	0	321.43	0.143			+	10559	EYDAKLEL	8	58	490.7499244433014	979.4852959534028	2	490.7502746582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EYDAKLEL_	REV__ENSG00000047662|ENST00000265018|FAM184B;REV__FAM184B|p.L321Tfs*29|1|0.36|ENSG00000047662|chr4:17707718-17707719|-/T|frameshift_variant;REV__FAM184B|p.L536Ffs*5|1|0.1|ENSG00000047662|chr4:17664648-17664649|-/A|frameshift_variant	47.657333605630114	0.6087971902037268	5				NaN	NaN	0	NaN	8307	4341	12649
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12669	35.543	NaN	1708	30	0	210.57	0.144	+			3841	ATALEYVYK	9	58	529.2820456381805	1056.549538343161	2	529.283935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATALEYVYK_	ENSG00000135441|ENST00000548925|BLOC1S1;ENST00000549147.1_1_12:56113198-56113390:+|nuORF;nc|ENSG00000135441|P78537-2|BLOC1S1	60.11826168202944	0.21262886028301267	5				NaN	NaN	0	NaN	8320	4347	12668
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12680	35.569	NaN	1891.1	30	0	387.9	0.214	+			45281	TVQVYIITK	9	50	532.8211228663009	1063.6276927994018	2	532.8228149414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVQVYIITK_	ENSG00000114388|ENST00000232501|NPRL2;ENST00000479512.5_1_3:50387244-50387426:-|nuORF;ENST00000487632.5_1_3:50386870-50387426:-|nuORF	37.50817390946774	0.44948750990682723	5				NaN	NaN	0	NaN	8328	4350	12679
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12681	35.572	NaN	839.96	30	0	116.73	0.035			+	13470	GLLDFTHLT	9	53	508.7738952636719	NaN	0	508.7738952636719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GLLDFTHLT_	REV__ENSG00000100439|ENST00000428304|ABHD4;REV__ENST00000539344.1_1_14:23067215-23072668:+|nuORF;REV__ENST00000544562.5_1_14:23067206-23078652:+|nuORF;REV__nc|ENSG00000100439|Q8TB40-2|ABHD4	30.503639358989545	0.3235605894931338	5				NaN	NaN	0	NaN	8329	4350	12679
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12702	35.621	NaN	3645.7	30	0	602.87	0.142			+	29872	PLGLAAYAR	9	58	466.27175061074604	930.5289482882921	2	466.2716979980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PLGLAAYAR_	REV__CREBBP|p.Q2411Sfs*2|1|0.24|ENSG00000005339|chr16:3727816-3727816|G/-|frameshift_variant;REV__CREBBP|p.S976Pfs*22|1|0.09|ENSG00000005339|chr16:3769309-3769309|G/-|frameshift_variant;REV__ENSG00000005339|ENST00000262367|CREBBP;REV__ENSG00000100393|ENST00000263253|EP300;REV__EP300|p.M1470Cfs*26|1|0.16|ENSG00000100393|chr22:41170521-41170521|A/-|frameshift_variant;REV__nc|ENSG00000005339|Q92793-2|CREBBP	44.53106598305862	0.36711179743858174	5				NaN	NaN	0	NaN	8344	4356	12701
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12711	35.643	NaN	930.43	30	0	146.33	0.143	+			42987	TEKIISAEL	9	47	502.2874997671947	NaN	0	502.2872619628906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEKIISAEL_	ENSG00000073614|ENST00000399788|KDM5A;nc|ENSG00000073614|P29375-2|KDM5A	63.53385203322761	0.134247007536971	5				NaN	NaN	0	NaN	8350	4359	12710
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12737	35.71	NaN	1575.7	30	0	125.04	0.214	+			34948	SAAKLLTEY	9	48	498.27484280288354	994.5351326725671	2	498.2747802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAAKLLTEY_	ENSG00000189221|ENST00000338702|MAOA;MAOA|p.G405Afs*12|1|0.26|ENSG00000189221|chrX:43741995-43741995|G/-|frameshift_variant	65.46538089061403	0.16805504838372562	5				NaN	NaN	0	NaN	8367	4368	12736
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12738	35.714	NaN	2842.3	30	0	146.45	0.036	+			41549	SVQDVIYVR	9	64	539.7974381040519	1077.5803232749038	2	539.7987060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVQDVIYVR_	ENSG00000099282|ENST00000373290|TSPAN15	50.033510581677724	0.3025703251535696	5				NaN	NaN	0	NaN	8368	4368	12736
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12756	35.75	NaN	1874.1	30	0	315.35	0.214			+	11384	FLLRCFQP	8	53	512.2770091174622	NaN	0	512.2775268554688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FLLRCFQP_	REV__ENST00000271332.3_1_1:109817672-109818002:+|nuORF	44.53106598305862	1.7418937515398478	5				NaN	NaN	0	NaN	8383	4371	12755
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12757	35.754	NaN	1899.2	30	0	388.7	0.035	+			27866	MTHSFVMY	8	54	516.2201174274225	1030.4256819216448	2	516.2218627929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_MTHSFVM(Oxidation (M))Y_	sp|P16730|UL87_HCMVAProteinUL87OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL87PE=3SV=1;sp|Q6SW55|UL87_HCMVMUncharacterizedproteinUL87OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL87PE=3SV=1	62.97842346883844	0.4722955155785405	5				NaN	NaN	0	NaN	8384	4371	12755
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12769	35.78	NaN	2237.7	30	0	556.54	0.143	+			25037	LLHQIIHK	8	48	501.31608251318323	1000.6176120931665	2	501.31640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LLHQIIHK_	ZNF573|p.R350I|1|0.18|ENSG00000189144|chr19:37739441-37739441|C/A|missense_variant	33.51558372728122	0.7005509609380386	5				NaN	NaN	0	NaN	8393	4374	12768
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12791	35.833	NaN	2916.6	30	0	215.47	0.155				-1	DCMDTECSYMC	11	74	666.6834245487723	NaN	0	667.0184936523438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_DCM(Oxidation (M))DTECSYM(Oxidation (M))C_	FBN3|p.G1826C|1|0.26|ENSG00000142449|chr19:8096507-8096507|C/A|missense_variant	5.220141733780809	0.456735970842152	5				NaN	NaN	0	NaN	8409	4380	12790
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12801	35.857	NaN	4321.6	30	0	1371.6	0.214	+			32545	QVTDFGFAK	9	55	506.75875046202253	1011.5029479908451	2	506.7586669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QVTDFGFAK_	ENSG00000072062|ENST00000308677|PRKACA;ENSG00000142875|ENST00000370685|PRKACB;ENSG00000165059|ENST00000377276|PRKACG;ENST00000536649.5_1_19:14208073-14223129:-|nuORF;ENST00000587533.1_1_19:14208360-14208546:-|nuORF;nc|ENSG00000072062|P17612-2|PRKACA;nc|ENSG00000142875|P22694-10|PRKACB;nc|ENSG00000142875|P22694-3|PRKACB;nc|ENSG00000142875|P22694-4|PRKACB;nc|ENSG00000142875|P22694-5|PRKACB;nc|ENSG00000142875|P22694-6|PRKACB;nc|ENSG00000142875|P22694-7|PRKACB;nc|ENSG00000142875|P22694-8|PRKACB;nc|ENSG00000142875|P22694-9|PRKACB;nc|ENSG00000142875|P22694|PRKACB	40.77816245573522	0.41113185337114944	5				NaN	NaN	0	NaN	8416	4383	12800
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12802	35.86	NaN	977.48	30	0	227.46	0.033	+			46721	VGPGGPTVIP	10	36	447.25792886171246	NaN	0	447.2580261230469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VGPGGPTVIP_	ENST00000537604.5_1_11:62469959-62472952:-|nuORF	16.473147378115264	0.4201028297492154	5				NaN	NaN	0	NaN	8417	4383	12800
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12830	35.929	NaN	2533.6	30	0	293.12	0.214	+			11800	FSRSNSFVY	9	55	553.76692322115	1105.5192935091	2	553.767822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FSRSNSFVY_	CON__ENSEMBL:ENSBTAP00000024146	68.484700416344	0.1473408039581241	5				NaN	NaN	0	NaN	8436	4392	12829
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12831	35.933	NaN	899.72	30	0	147.89	0.034	+			23654	LARRAQATA	9	43	479.2845827801781	NaN	0	479.2846374511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LARRAQATA_	ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;TRRAP|p.K3443Sfs*19|1|0.28|ENSG00000196367|chr7:99004246-99004246|A/-|frameshift_variant	40.77816245573522	0.2702456086868081	5				NaN	NaN	0	NaN	8437	4392	12829
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12850	35.979	NaN	1183.6	30	0	135.03	0.143	+			17537	IDQPEVAVY	9	57	517.2645874023438	NaN	0	517.2645874023438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IDQPEVAVY_	ENSG00000204186|ENST00000374423|ZDBF2;ZDBF2|p.K1728Nfs*5|1|0.48|ENSG00000204186|chr2:206309704-206309704|A/-|frameshift_variant;ZDBF2|p.L2270*|1|0.42|ENSG00000204186|chr2:206311334-206311334|T/-|frameshift_variant;ZDBF2|p.T1000Qfs*3|1|0.17|ENSG00000204186|chr2:206307522-206307522|A/-|frameshift_variant	35.61828744233558	0.29773779453147337	5				NaN	NaN	0	NaN	8450	4398	12849
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12874	36.035	NaN	864.27	30	0	82.074	0.143			+	21447	KNEFSIMI	8	49	491.2575972824748	980.5006416317497	2	491.2576599121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KNEFSIMI_	REV__tr|U7T2F7|U7T2F7_FUSNUGTPaseDerOS=FusobacteriumnucleatumCTI-5OX=1316586GN=derPE=3SV=1	40.5726180659479	0.6527593143185008	5				NaN	NaN	0	NaN	8468	4404	12873
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12888	36.066	NaN	5244.7	30	0	1297.2	0.143	+			45361	TVTAQILLK	9	54	493.81605092865806	985.6175489241161	2	493.8164367675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVTAQILLK_	ENSG00000178982|ENST00000248342|EIF3K;ENST00000514461.1_1_4:116964948-116965134:-|nuORF;ENST00000586932.5_1_19:39109833-39116793:+|nuORF;ENST00000593062.5_1_19:39109833-39121488:+|nuORF;nc|ENSG00000178982|Q9UBQ5-2|EIF3K	91.26522074875469	0.06129826844580791	5				NaN	NaN	0	NaN	8479	4407	12887
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12905	36.103	NaN	5999.9	30	0	845.71	0.142	+			27102	MANGAVIHL	9	61	463.24991102539923	924.4852691175985	2	463.24993896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MANGAVIHL_	ENSG00000099995|ENST00000215793|SF3A1;nc|ENSG00000099995|Q15459-2|SF3A1	163.84426431716093	0.003817671866125946	5				NaN	NaN	0	NaN	8493	4410	12904
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12918	36.132	NaN	2262.7	30	0	466.25	0.142	+			10377	EVAKVIVSM	9	56	488.2803439404029	974.5461349476058	2	488.2810974121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EVAKVIVSM_	AKAP9|p.Q3083Nfs*28|1|0.15|ENSG00000127914|chr7:92089389-92089390|-/TGAATATCAAGCAGCTATGGAATGCC|frameshift_variant;AKAP9|p.T1942Lfs*3|3|0.18|ENSG00000127914|chr7:92062328-92062328|A/-|frameshift_variant;ENSG00000127914|ENST00000356239|AKAP9;ENST00000493453.1_1_7:91570251-91670224:+|nuORF;nc|ENSG00000127914|Q99996-1|AKAP9;nc|ENSG00000127914|Q99996-3|AKAP9;nc|ENSG00000127914|Q99996-4|AKAP9;nc|ENSG00000127914|Q99996-5|AKAP9;nc|ENSG00000127914|Q99996-6|AKAP9	115.49404669440601	0.023927554121326553	5				NaN	NaN	0	NaN	8503	4413	12917
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12929	36.157	NaN	3977.9	30	0	1211.7	0.142	+			17100	HSGPVIPVY	9	50	484.7636415946222	967.5127302560444	2	484.7639465332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HSGPVIPVY_	ENSG00000114315|ENST00000232424|HES1	47.91560031466742	0.327412564698279	5				NaN	NaN	0	NaN	8511	4416	12928
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12945	36.192	NaN	3353.8	30	0	939.16	0.214	+			18976	IVSDFTIGR	9	57	504.2800815675265	1006.545610201853	2	504.2802429199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IVSDFTIGR_	ENSG00000110713|ENST00000324932|NUP98;nc|ENSG00000110713|P52948-2|NUP98;nc|ENSG00000110713|P52948-3|NUP98;nc|ENSG00000110713|P52948-4|NUP98;nc|ENSG00000110713|P52948-6|NUP98;nc|ENSG00000110713|P52948|NUP98;NUP98|p.N1328Tfs*89|2|0.22|ENSG00000110713|chr11:3699159-3699159|T/-|frameshift_variant	101.25262130126117	0.03792372629710479	5				NaN	NaN	0	NaN	8524	4419	12944
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12946	36.196	NaN	2021.8	30	0	401.55	0.106			+	10260	ETLKQITL	8	52	473.28447450748195	944.5543960817639	2	473.28460693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ETLKQITL_	REV__tr|U7ST18|U7ST18_FUSNURibosomalRNAsmallsubunitmethyltransferaseEOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01248PE=3SV=1	45.97224482568171	0.6192535143389125	5				NaN	NaN	0	NaN	8525	4419	12944
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12947	36.198	NaN	1561	30	0	164.37	0.035	+			44441	TSMLYVVGK	9	53	499.27319864086115	996.5318443485223	2	499.27301025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TSMLYVVGK_	ENSG00000106789|ENST00000375077|CORO2A	64.20726635412375	0.17854274437659667	5				NaN	NaN	0	NaN	8526	4419	12944
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12958	36.221	NaN	1649.6	30	0	220.98	0.142	+			48230	VTAVPTLLK	9	56	471.3054569410923	940.5963609489846	2	471.3056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTAVPTLLK_	ENSG00000129235|ENST00000250101|TXNDC17;ENST00000571029.1_1_17:6544987-6546336:+|nuORF	62.107414245175825	0.1960472003779324	5				NaN	NaN	0	NaN	8534	4422	12957
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12970	36.249	NaN	2388.7	30	0	258.21	0.214	+			10467	EVNSGFFYK	9	61	545.7636547653751	1089.5127565975502	2	545.7647705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EVNSGFFYK_	CCT6A|p.I274*|1|0.21|ENSG00000146731|chr7:56058450-56058450|A/-|frameshift_variant;CCT6B|p.I274*|1|0.1|ENSG00000132141|chr17:34942549-34942549|T/-|frameshift_variant;ENSG00000132141|ENST00000314144|CCT6B;ENSG00000146731|ENST00000275603|CCT6A;ENST00000482776.1_1_7:56124009-56126486:+|nuORF;nc|ENSG00000132141|Q92526-2|CCT6B;nc|ENSG00000132141|Q92526-3|CCT6B;nc|ENSG00000146731|P40227-2|CCT6A	45.97224482568171	0.3502073465782774	5				NaN	NaN	0	NaN	8543	4425	12969
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12971	36.252	NaN	853.05	30	0	436.94	0.031			+	394	AASGLALAA	9	27	372.7176410138604	NaN	0	372.7175598144531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AASGLALAA_	REV__ENSG00000165644|ENST00000372538|COMTD1;REV__ENST00000469299.1_2_10:76995129-76995674:-|nuORF;REV__ENST00000491270.1_1_10:76995548-76995725:-|nuORF	12.959181472943097	0.3931207604263714	5				NaN	NaN	0	NaN	8544	4425	12969
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12980	36.273	NaN	1317.2	30	0	167.11	0.141	+			46209	VEAGGMQAL	9	44	438.2180890011144	874.4216250690288	2	438.2181701660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VEAGGMQAL_	ENSG00000168036|ENST00000349496|CTNNB1;ENSG00000173801|ENST00000393931|JUP	62.107414245175825	0.1960472003779324	5				NaN	NaN	0	NaN	8550	4428	12979
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13006	36.34	NaN	2374.1	30	0	326.38	0.214	+			37305	SLDGVAVAVL	10	52	472.2766394613602	942.5387259895205	2	472.2764587402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLDGVAVAVL_	ARHGAP22|p.A399V|1|0.23|ENSG00000128805|chr10:48450933-48450933|G/A|missense_variant	73.97473282117947	0.24484687617201792	5				NaN	NaN	0	NaN	8567	4437	13005
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13007	36.343	NaN	2799.6	30	0	379.06	0.106	+			31870	QPVSQPLTY	9	58	516.7713057238444	1031.5280585144887	2	517.2734985351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QPVSQPLTY_	ENSG00000177106|ENST00000318562|EPS8L2;ENST00000526909.5_1_11:710402-726978:+|nuORF;ENST00000527832.5_1_11:724661-726978:+|nuORF;ENST00000531393.5_1_11:721935-726978:+|nuORF;ENST00000534679.1_1_11:726170-726978:+|nuORF;EPS8L2|p.V669Gfs*33|1|0.13|ENSG00000177106|chr11:726690-726690|T/-|frameshift_variant;nc|ENSG00000177106|Q9H6S3-2|EPS8L2;nc|ENSG00000177106|Q9H6S3-3|EPS8L2	66.42927471994793	0.16001998865088202	5				NaN	NaN	0	NaN	8568	4437	13005
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13008	36.345	NaN	907.89	30	0	126.09	0.035	+			32687	RAGGKRNAF	9	48	488.7773580061475	NaN	0	488.7767028808594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RAGGKRNAF_	ENST00000395029.5_1_5:133480490-133481991:+|nuORF	38.80614096846853	0.28164298475537564	5				NaN	NaN	0	NaN	8569	4437	13005
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13018	36.367	NaN	10185	30	0	3361.4	0.143	+			29000	NSNDVFVLK	9	72	518.276892491382	1034.539232049564	2	518.277587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NSNDVFVLK_	ENSG00000006747|ENST00000297029|SCIN;ENSG00000127831|ENST00000248444|VIL1;nc|ENSG00000006747|Q9Y6U3-3|SCIN	128.60217544463768	0.015992218256422188	5				NaN	NaN	0	NaN	8576	4440	13017
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13027	36.389	NaN	1898.5	30	0	273.83	0.214	+			15392	GTYDILVTK	9	56	505.28221275132887	1008.5498725694578	2	505.28204345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTYDILVTK_	ENSG00000114302|ENST00000265563|PRKAR2A;nc|ENSG00000114302|P13861-2|PRKAR2A	90.60085204095205	0.06317133949006545	5				NaN	NaN	0	NaN	8582	4443	13026
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13028	36.392	NaN	1076.8	30	0	124.68	0.106	+			29970	PPAESVPLIG	10	51	490.276437786246	NaN	0	490.2761535644531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PPAESVPLIG_	ENSG00000129749|ENST00000250699|CHRNA10	37.15910966729921	0.3781637092648983	5				NaN	NaN	0	NaN	8583	4443	13026
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13029	36.394	NaN	1239.6	30	0	58.553	0.05				-1	CCGDEMGDDCN	11	56	666.6840646137363	NaN	0	666.6834716796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	3 Carbamidomethyl (C)	_C(Carbamidomethyl (C))C(Carbamidomethyl (C))GDEMGDDC(Carbamidomethyl (C))N_	ENSG00000135272|ENST00000393486|MDFIC;ENST00000431629.5_2_7:114654517-114655986:+|nuORF;nc|ENSG00000135272|Q9P1T7-1|MDFIC	2.92943323627438	0.456735970842152	5				NaN	NaN	0	NaN	8584	4443	13026
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13037	36.413	NaN	2343.3	30	0	785.63	0.214	+			32221	QTAQIFFTK	9	62	542.2948145677906	1082.575076202381	2	542.29638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QTAQIFFTK_	ENSG00000167778|ENST00000301463|SPRYD3	63.53385203322761	0.18415635464017938	5				NaN	NaN	0	NaN	8589	4446	13036
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13038	36.416	NaN	1459.9	30	0	345.21	0.035	+			11270	FISAGNKVY	9	58	499.7692556283624	997.5239583235248	2	499.7689208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FISAGNKVY_	ENSG00000104237|ENST00000220676|RP1	32.81241826257853	0.4965981579233955	5				NaN	NaN	0	NaN	8590	4446	13036
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13067	36.497	NaN	921.07	30	0	102.78	0.142	+			48541	VTNVTSLLK	9	43	487.79769100790395	973.5808290826079	2	487.7981262207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTNVTSLLK_	ENSG00000137076|ENST00000314888|TLN1;ENSG00000171914|ENST00000636159|TLN2;nc|ENSG00000137076|Q9Y490-2|TLN1	35.15202426646627	0.4747332964206883	5				NaN	NaN	0	NaN	8607	4458	13066
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13096	36.58	NaN	4208.4	30	0	847	0.143	+			14492	GTCLFVAVK	9	62	497.7735008381864	993.5324487431728	2	497.77325439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GTC(Carbamidomethyl (C))LFVAVK_	ENSG00000198752|ENST00000361246|CDC42BPB	122.1759843771914	0.019882474861609503	5				NaN	NaN	0	NaN	8624	4470	13095
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13106	36.614	NaN	2614.1	30	0	429.47	0.214	+			28130	NAISVTTSY	9	54	478.2402229193658	954.4658929055316	2	478.2402038574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAISVTTSY_	ENSG00000198730|ENST00000361367|CTR9	157.32903759742106	0.0051608477690748295	5				NaN	NaN	0	NaN	8628	4476	13105
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13107	36.618	NaN	2088.7	30	0	306.16	0.035	+			51159	YPAQGVQQF	9	53	519.2564389168346	1036.498324900469	2	519.257568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YPAQGVQQF_	EIF4G1|p.P1229Qfs*2|1|0.18|ENSG00000114867|chr3:184327606-184327606|C/-|frameshift_variant;EIF4G1|p.T436Hfs*40|1|0.21|ENSG00000114867|chr3:184321883-184321884|-/C|frameshift_variant;ENSG00000114867|ENST00000346169|EIF4G1;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1	90.77665401227738	0.06267569666681755	5				NaN	NaN	0	NaN	8629	4476	13105
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13122	36.656	NaN	2381.9	30	0	511.16	0.214	+			13678	GPEVHWNI	8	46	476.2378808234668	950.4612087137336	2	476.2375183105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GPEVHWNI_	ENST00000497027.5_1_3:55514830-55515374:-|nuORF	33.51558372728122	0.7005509609380386	5				NaN	NaN	0	NaN	8638	4482	13121
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13123	36.66	NaN	1432.9	30	0	160.09	0.106	+			36444	SEVELMKV	8	48	467.7496427124241	NaN	0	467.7493591308594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEVELMKV_	ENSG00000115758|ENST00000234111|ODC1	64.20726635412375	1.7418937515398478	5				NaN	NaN	0	NaN	8639	4482	13121
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13124	36.662	NaN	1243.8	30	0	466.25	0.035	+			44069	TPSQPLPTY	9	40	502.2589755498338	1002.5033981664676	2	502.2583312988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TPSQPLPTY_	ENSG00000173821|ENST00000582970|RNF213;nc|ENSG00000173821|Q63HN8-4|RNF213;nc|ENSG00000173821|Q63HN8|RNF213;RNF213|p.C5022Lfs*7|1|0.3|ENSG00000173821|chr17:80389237-80389237|G/-|frameshift_variant;RNF213|p.P2167Lfs*64|1|0.09|ENSG00000173821|chr17:80344834-80344835|-/T|frameshift_variant;RNF213|p.Q1953Rfs*50|2|0.13|ENSG00000173821|chr17:80340219-80340219|C/-|frameshift_variant	44.377184641726394	0.36891676396732553	5				NaN	NaN	0	NaN	8640	4482	13121
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13133	36.682	NaN	1462.9	30	0	389.45	0.142	+			5064	ATSKIPLAL	9	48	457.2894788718208	912.5644048104416	2	457.2896423339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSKIPLAL_	ENSG00000181143|ENST00000397910|MUC16;MUC16|p.F10843Sfs*11|1|0.22|ENSG00000181143|chr19:8938427-8938427|A/-|frameshift_variant;MUC16|p.K6604Rfs*26|1|0.27|ENSG00000181143|chr19:8956959-8956959|T/-|frameshift_variant;MUC16|p.L8270Wfs*63|1|0.04|ENSG00000181143|chr19:8951962-8951963|-/ACCA|frameshift_variant;MUC16|p.N9430Tfs*13|1|0.14|ENSG00000181143|chr19:8948481-8948481|T/-|frameshift_variant;MUC16|p.S4774Ffs*12|1|0.01|ENSG00000181143|chr19:8962451-8962452|-/AC|frameshift_variant;MUC16|p.S6098Wfs*23|1|0.17|ENSG00000181143|chr19:8958477-8958478|-/GGTGACATCTCTTGGCCAACTGACCCTGGACACATCAACC|frameshift_variant;MUC16|p.S6614Lfs*30|1|0.04|ENSG00000181143|chr19:8956931-8956932|-/A|frameshift_variant;MUC16|p.S7713Lfs*5|1|0.45|ENSG00000181143|chr19:8953634-8953634|G/-|frameshift_variant;MUC16|p.T7968Nfs*2|1|0.41|ENSG00000181143|chr19:8952867-8952868|-/T|frameshift_variant;MUC16|p.T8791Qfs*38|1|0.31|ENSG00000181143|chr19:8950403-8950403|G/-|frameshift_variant	34.172542307311794	0.4838870758800184	5				NaN	NaN	0	NaN	8646	4485	13132
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13159	36.749	NaN	4094.7	30	0	1265.5	0.214	+			41686	SVSDIIVVAK	10	60	515.8107472496841	1029.6069415661682	2	515.8114624023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSDIIVVAK_	ENSG00000006042|ENST00000579849|TMEM98;ENST00000583120.1_1_17:31258522-31263466:+|nuORF	147.73206827945663	0.008898223230177705	5				NaN	NaN	0	NaN	8663	4494	13158
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13160	36.753	NaN	1394.2	30	0	591.54	0.03	+			46700	VGLGLGVG	8	26	336.2078674612896	670.4011819893792	2	336.2080993652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VGLGLGVG_	ENST00000409419.5_1_19:40854631-40872336:+|nuORF;ENST00000409587.5_1_19:40854631-40871796:+|nuORF;ENST00000594085.5_1_19:40854631-40871460:+|nuORF	33.49298260027079	0.7007254697536482	5				NaN	NaN	0	NaN	8664	4494	13158
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13181	36.813	NaN	736.9	30	0	74.703	0.142			+	11358	FLGTSLGIL	9	40	460.7763190446043	NaN	0	460.7759704589844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FLGTSLGIL_	REV__ENSG00000137601|ENST00000507142|NEK1;REV__nc|ENSG00000137601|Q96PY6-2|NEK1;REV__nc|ENSG00000137601|Q96PY6-4|NEK1;REV__nc|ENSG00000137601|Q96PY6-6|NEK1;REV__nc|ENSG00000137601|Q96PY6|NEK1	42.47446043378293	0.25855550551448697	5				NaN	NaN	0	NaN	8676	4503	13180
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13193	36.865	NaN	1876.9	30	0	438.78	0.142			+	37116	SISVMKALP	9	47	481.27316419406617	960.5317754549324	2	481.27288818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_SISVM(Oxidation (M))KALP_	REV__ENST00000355072.9_1_4:3244305-3244500:+|nuORF	53.351449002276354	0.2690372970092375	5				NaN	NaN	0	NaN	8679	4512	13192
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13204	36.891	NaN	622.74	30	0	57.348	0.142	+			30736	QDLIRLVA	8	38	464.2845458984375	NaN	0	464.2845458984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QDLIRLVA_	ENSG00000143341|ENST00000271588|HMCN1;nc|ENSG00000143341|Q96RW7-2|HMCN1	49.44154591367651	1.7418937515398478	5				NaN	NaN	0	NaN	8687	4515	13203
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13217	36.92	NaN	2426.1	30	0	615	0.143	+			49055	VVINYSIVK	9	59	517.8162722872991	1033.617991641398	2	517.816162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVINYSIVK_	ENSG00000196405|ENST00000392920|EVL;ENST00000554460.5_1_14:100540857-100568654:+|nuORF;ENST00000556921.1_1_14:100551177-100572452:+|nuORF;ENST00000557637.1_1_14:100531783-100564000:+|nuORF;EVL|p.P188Hfs*41|1|0.18|ENSG00000196405|chr14:100128589-100128590|-/CC|frameshift_variant;nc|ENSG00000196405|Q9UI08-3|EVL;nc|ENSG00000196405|Q9UI08-4|EVL;nc|ENSG00000196405|Q9UI08-5|EVL;nc|ENSG00000196405|Q9UI08|EVL	65.46538089061403	0.16805504838372562	5				NaN	NaN	0	NaN	8697	4518	13216
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13228	36.946	NaN	906.75	30	0	79.323	0.143	+			13384	GLCLKICY	8	46	513.7586669921875	NaN	0	513.7586669921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_GLC(Carbamidomethyl (C))LKIC(Carbamidomethyl (C))Y_	ENSG00000172575|ENST00000310803|RASGRP1;nc|ENSG00000172575|O95267-2|RASGRP1;nc|ENSG00000172575|O95267-3|RASGRP1;nc|ENSG00000172575|O95267-4|RASGRP1;nc|ENSG00000172575|O95267-5|RASGRP1	44.53106598305862	1.7418937515398478	5				NaN	NaN	0	NaN	8705	4521	13227
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13239	36.972	NaN	2046.7	30	0	488.94	0.214			+	9101	EGKLTLILG	9	51	472.2948445036394	NaN	0	472.2948913574219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EGKLTLILG_	REV__ENSG00000108187|ENST00000358769|PBLD;REV__ENST00000277795.8_1_10:70048210-70048411:-|nuORF;REV__nc|ENSG00000108187|P30039-2|PBLD	40.77816245573522	0.2702456086868081	5				NaN	NaN	0	NaN	8713	4524	13238
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13240	36.976	NaN	1708.6	30	0	412.38	0.036	+			6034	AVMGAYVLLK	10	53	540.8097985035823	1079.6050440739646	2	541.31298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_AVM(Oxidation (M))GAYVLLK_	ENSG00000166562|ENST00000587834|SEC11C;ENST00000591406.1_1_18:56822908-56825914:+|nuORF	71.29570347882199	0.26673431503403816	5				NaN	NaN	0	NaN	8714	4524	13238
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13248	36.995	NaN	2082	30	0	419.76	0.143	+			9042	EGFKMGLTL	9	50	506.2642404192184	1010.5139279052369	2	506.2655029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_EGFKM(Oxidation (M))GLTL_	ENSG00000144366|ENST00000409830|GULP1;ENST00000496976.1_1_2:189454447-189458735:+|nuORF;nc|ENSG00000144366|Q9UBP9-3|GULP1	74.25504064058377	0.12238981753128622	5				NaN	NaN	0	NaN	8719	4527	13247
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13271	37.051	NaN	382.63	30	0	47.527	0.141	+			17026	HPVKIGDL	8	27	439.75775146484375	NaN	0	439.75775146484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HPVKIGDL_	ENSG00000135250|ENST00000393651|SRPK2;ENST00000476117.1_1_7:104800923-104844162:-|nuORF;nc|ENSG00000135250|P78362|SRPK2;SRPK2|p.Q368Sfs*16|1|0.04|ENSG00000135250|chr7:105142416-105142417|-/AGGA|frameshift_variant;SRPK2|p.V366Ifs*7|1|0.02|ENSG00000135250|chr7:105142419-105142422|CTAC/-|frameshift_variant	30.503639358989545	1.7418937515398478	5				NaN	NaN	0	NaN	8736	4533	13270
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13278	37.072	NaN	2871.7	30	0	729.94	0.142	+			41214	SVLEGVLSK	9	58	466.27673030714357	930.5389076810872	2	466.2768859863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVLEGVLSK_	CADPS2|p.N1185Tfs*15|1|0.4|ENSG00000081803|chr7:122345632-122345632|T/-|frameshift_variant;ENSG00000081803|ENST00000449022|CADPS2;nc|ENSG00000081803|Q86UW7-2|CADPS2;nc|ENSG00000081803|Q86UW7-3|CADPS2	117.81106730687013	0.02252488733980868	5				NaN	NaN	0	NaN	8740	4536	13277
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13287	37.094	NaN	1058.2	30	0	164.78	0.143				-1	TVCDLVLGK	9	52	502.77617721817955	NaN	0	502.7762756347656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_TVC(Carbamidomethyl (C))DLVLGK_	ENST00000482547.1_1_10:131265539-131334642:+|nuORF;ENST00000482653.1_1_10:131265539-131362121:+|nuORF	45.97224482568171	0.23445038899310136	5				NaN	NaN	0	NaN	8746	4539	13286
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13304	37.149	NaN	1523.7	30	0	311.87	0.141	+			23896	LDKATVLL	8	48	436.77631060010754	NaN	0	436.7763671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LDKATVLL_	ENSG00000150593|ENST00000280154|PDCD4;ENST00000489049.5_1_10:112647518-112650449:+|nuORF;nc|ENSG00000150593|Q53EL6-2|PDCD4	90.36981228632155	1.7418937515398478	5				NaN	NaN	0	NaN	8754	4548	13303
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13313	37.171	NaN	2551.1	30	0	417.38	0.144	+			18754	ITLKKEDMI	9	62	545.8124421257354	1089.6103313182707	2	545.8134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ITLKKEDMI_	tr|U7T296|U7T296_FUSNUMetallo-beta-lactamasedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00517PE=3SV=1	60.11826168202944	0.21262886028301267	5				NaN	NaN	0	NaN	8760	4551	13312
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13331	37.228	NaN	2777.2	30	0	371.06	0.214	+			28435	NEVLVKTY	8	69	483.26877779770444	964.5230026622089	2	483.2693176269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NEVLVKTY_	ENSG00000186310|ENST00000373079|NAP1L3	74.25504064058377	0.37144338840759816	5				NaN	NaN	0	NaN	8769	4560	13330
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13332	37.232	NaN	2915.9	30	0	564.7	0.032	+			23541	LAKGGLLL	8	51	392.76825471805813	783.5219565029163	2	392.7681579589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LAKGGLLL_	ENST00000310454.10_1_2:157426665-157427646:+|nuORF	96.04771818265245	0.25916207331555047	5				NaN	NaN	0	NaN	8770	4560	13330
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13337	37.247	NaN	2021.4	30	0	1006.4	0.144			+	20814	KIFERVDF	8	51	527.2898917075192	1052.5652304818384	2	527.2907104492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KIFERVDF_	REV__tr|U7SV25|U7SV25_FUSNUBiotinbiosynthesisproteinBioCOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01102PE=4SV=1	37.15910966729921	0.6739408393984688	5				NaN	NaN	0	NaN	8772	4563	13336
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13344	37.266	NaN	2016.1	30	0	576.94	0.142	+			8610	ECLRLCVL	8	44	474.7534448915978	947.4923368499956	2	474.7543640136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ECLRLCVL_	ENSG00000154099|ENST00000378553|DNAAF1;nc|ENSG00000154099|Q8NEP3-3|DNAAF1	53.351449002276354	0.5676011784961348	5				NaN	NaN	0	NaN	8776	4566	13343
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13363	37.323	NaN	911.84	30	0	125.71	0.141	+			50522	YAPSGNFV	8	36	427.70577360062595	853.3969942680519	2	427.7056579589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YAPSGNFV_	ENSG00000111664|ENST00000229264|GNB3;ENSG00000172354|ENST00000303210|GNB2;ENST00000470354.1_1_7:100275135-100275402:+|nuORF;nc|ENSG00000111664|P16520-2|GNB3;nc|ENSG00000172354|P62879-2|GNB2	53.351449002276354	0.5676011784961348	5				NaN	NaN	0	NaN	8786	4575	13362
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13387	37.389	NaN	1941.8	30	0	309.38	0.142			+	6919	CMHLVAALI	9	54	485.76384516055685	969.5131373879137	2	485.7637023925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CMHLVAALI_	REV__OR2T33|p.R227C|1|0.29|ENSG00000177212|chr1:248273136-248273136|G/A|missense_variant	39.021493756699265	0.43173687394350213	5				NaN	NaN	0	NaN	8801	4584	13386
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13467	37.631	NaN	2728	30	0	230.92	0.214	+			812	AEFVGVSHL	9	52	479.75407814409755	957.4936033549951	2	479.75335693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEFVGVSHL_	ENSG00000141101|ENST00000268802|NOB1;ENST00000502915.1_1_4:139481866-139482694:+|nuORF	74.25504064058377	0.12238981753128622	5				NaN	NaN	0	NaN	8845	4620	13466
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13468	37.634	NaN	3119.1	30	0	470.92	0.034			+	7651	DKQFVLGK	8	53	467.7718070044451	933.5290610756903	2	467.77178955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DKQFVLGK_	REV__ENSG00000107960|ENST00000224950|STN1;REV__ENST00000466828.5_1_10:105642444-105658073:-|nuORF	52.936696900407355	0.5717071646657654	5				NaN	NaN	0	NaN	8846	4620	13466
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13495	37.715	NaN	1476.1	30	0	265.24	0.214	+			16271	HEGDIILKI	9	54	519.3031135711051	1036.59167420901	2	519.3034057617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HEGDIILKI_	ENSG00000119139|ENST00000377245|TJP2;nc|ENSG00000119139|Q9UDY2-2|TJP2;nc|ENSG00000119139|Q9UDY2-3|TJP2;nc|ENSG00000119139|Q9UDY2-4|TJP2;nc|ENSG00000119139|Q9UDY2-5|TJP2;nc|ENSG00000119139|Q9UDY2-6|TJP2;nc|ENSG00000119139|Q9UDY2-7|TJP2;TJP2|p.F813Sfs*12|1|0.23|ENSG00000119139|chr9:69240013-69240013|T/-|frameshift_variant;TJP2|p.P484Qfs*30|1|0.18|ENSG00000119139|chr9:69228107-69228107|C/-|frameshift_variant;TJP2|p.T849Rfs*12|1|0.32|ENSG00000119139|chr9:69240120-69240120|A/-|frameshift_variant	76.16968421966216	0.11411088698345859	5				NaN	NaN	0	NaN	8861	4632	13494
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13496	37.718	NaN	1457.7	30	0	164.09	0.034			+	-1	SKVAMVIGK	9	53	474.77972412109375	NaN	0	474.77972412109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_SKVAM(Oxidation (M))VIGK_	REV__ENST00000425839.1_1_6:30437447-30438005:+|nuORF	62.107414245175825	0.1403307765918332	5				NaN	NaN	0	NaN	8862	4632	13494
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13503	37.735	NaN	2364.8	30	0	468.19	0.214	+			44787	TTQLSLSFK	9	51	512.7874007962969	1023.5602486593938	2	512.7876586914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTQLSLSFK_	ENSG00000198786|ENST00000361567|MT-ND5	70.8162118820467	0.13725933411854815	5				NaN	NaN	0	NaN	8866	4635	13502
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13504	37.738	NaN	1955.7	30	0	381.53	0.034	+			35075	SAFGVIIEK	9	47	482.2790739134568	962.5435948937136	2	482.279052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAFGVIIEK_	ENSG00000178440|ENST00000651763|TIMM23B-AGAP6;ENSG00000204152|ENST00000651259|TIMM23B;ENSG00000265354|ENST00000580018|TIMM23;nc|ENSG00000204152|Q5SRD1-2|TIMM23B	53.08895987439943	0.27122541748218487	5				NaN	NaN	0	NaN	8867	4635	13502
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13541	37.84	NaN	1646.3	30	0	154.04	0.142	+			7261	DALVITHY	8	49	466.24795983523643	930.4813667372729	2	466.7489013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DALVITHY_	ENSG00000109917|ENST00000227322|ZPR1	82.30502934623384	0.30436709589983096	5				NaN	NaN	0	NaN	8889	4650	13540
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13562	37.898	NaN	1690.9	30	0	227.27	0.143	+			47274	VMTGSYNNF	9	56	516.7265794480734	1031.4386059629467	2	516.7267456054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VMTGSYNNF_	ABHD12-PPP2R2A|1|fusion;ENSG00000221914|ENST00000380737|PPP2R2A;ENST00000517754.1_1_8:26221160-26227926:+|nuORF;nc|ENSG00000221914|P63151-2|PPP2R2A	74.25504064058377	0.12238981753128622	5				NaN	NaN	0	NaN	8901	4659	13561
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13571	37.92	NaN	3444.8	30	0	770.73	0.214	+			248	AAMLDTVVFK	10	59	555.7970902842472	1109.5796276352944	2	555.7977905273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_AAM(Oxidation (M))LDTVVFK_	ENSG00000115233|ENST00000409682|PSMD14;ENST00000477232.5_1_2:162241962-162267908:+|nuORF;ENST00000492908.1_1_2:162265323-162267908:+|nuORF	112.41091882917199	0.040839805697094264	5				NaN	NaN	0	NaN	8907	4662	13570
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13572	37.924	NaN	988.2	30	0	106.61	0.035	+			10927	FDMKTVWQ	8	46	527.757058045347	NaN	0	527.757568359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FDMKTVWQ_	ENSG00000164746|ENST00000348904|C7orf57;nc|nan|Q8NEG2-2|C7orf57	53.351449002276354	1.7418937515398478	5				NaN	NaN	0	NaN	8908	4662	13570
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13582	37.946	NaN	2161.1	30	0	411.91	0.142			+	-1	QMILTTAI	8	45	453.7518005371094	NaN	0	453.7518005371094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_QM(Oxidation (M))ILTTAI_	REV__tr|U7T3S8|U7T3S8_FUSNUProbablequeuosineprecursortransporterOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00243PE=3SV=1	85.35947970620816	1.7418937515398478	5				NaN	NaN	0	NaN	8915	4665	13581
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13598	37.992	NaN	929.96	30	0	58.439	0.143	+			2475	APLQEKVVF	9	49	515.8012561290572	NaN	0	515.8016967773438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_APLQEKVVF_	ENSG00000006831|ENST00000357103|ADIPOR2;ENSG00000159346|ENST00000340990|ADIPOR1	39.252832667884924	0.27938773122138094	5				NaN	NaN	0	NaN	8925	4671	13597
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13628	38.083	NaN	573.69	30	0	101.45	0.141	+			1416	AEVVLAHL	8	32	426.253081675469	850.491610417738	2	426.25299072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEVVLAHL_	ENSG00000163902|ENST00000296255|RPN1;ENST00000481168.1_1_3:128363760-128369658:-|nuORF;ENST00000497415.1_1_3:128359957-128369658:-|nuORF	54.76467175910256	0.5536104764165384	5				NaN	NaN	0	NaN	8940	4686	13627
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13639	38.119	NaN	1317.7	30	0	268.58	0.145	+			40859	SVFEDPVISK	10	48	560.7980855874783	1119.5816182417566	2	560.7992553710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVFEDPVISK_	ENSG00000125445|ENST00000245539|MRPS7;MRPS7|p.L162Pfs*29|1|0.05|ENSG00000125445|chr17:75263482-75263483|-/C|frameshift_variant	59.93077597824379	0.36646980200755325	5				NaN	NaN	0	NaN	8945	4692	13638
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13650	38.153	NaN	1447.5	30	0	288.63	0.143	+			40840	SVELPIVGK	9	55	471.2871951960379	940.5598374588758	2	471.2870178222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVELPIVGK_	ENSG00000240849|ENST00000371652|PEDS1;ENST00000453505.6_1_20:48741597-48767785:-|nuORF	42.396135135203025	0.392153681582562	5				NaN	NaN	0	NaN	8950	4698	13649
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13685	38.257	NaN	1676.8	30	0	331.65	0.143	+			44325	TSFSEALLK	9	49	498.2741698986662	994.5337868641324	2	498.2740783691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSFSEALLK_	ENSG00000143621|ENST00000361891|ILF2	31.529811441608018	0.5085848003137583	5				NaN	NaN	0	NaN	8970	4713	13684
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13708	38.319	NaN	3924	30	0	1789.2	0.155				-1	 	0	54	610.9801880742726	1829.9187348230178	3	611.3139038085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8984	4722	13707
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13723	38.359	NaN	1084	30	0	112.16	0.143	+			14276	GSVELPIVGK	10	47	499.79796161700057	NaN	0	499.7989501953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSVELPIVGK_	ENSG00000240849|ENST00000371652|PEDS1;ENST00000453505.6_1_20:48741597-48767785:-|nuORF	41.42661286455405	0.3598046802465243	5				NaN	NaN	0	NaN	8993	4728	13722
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13738	38.399	NaN	579.76	30	0	40.277	0.142				-1	CLSVLGDMA	9	37	483.22503662109375	NaN	0	483.22503662109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_C(Carbamidomethyl (C))LSVLGDMA_	ENST00000361464.7_1_10:103545710-103545821:-|nuORF	23.04248740728303	0.3589936788096251	5				NaN	NaN	0	NaN	9002	4734	13737
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13775	38.504	NaN	4442	30	0	1514.2	0.142	+			40841	SVELPIVGK	9	54	471.2871951960379	940.5598374588758	2	471.2872009277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVELPIVGK_	ENSG00000240849|ENST00000371652|PEDS1;ENST00000453505.6_1_20:48741597-48767785:-|nuORF	71.87747018426188	0.13267044672804276	5				NaN	NaN	0	NaN	9024	4749	13774
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13828	38.691	NaN	2177.8	30	0	891.97	0.141			+	44929	TVALALGLK	9	40	443.29218306605094	884.5698131989019	2	443.2913818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVALALGLK_	REV__nc|ENSG00000121940|Q96S66-4|CLCC1	42.396135135203025	0.392153681582562	5				NaN	NaN	0	NaN	9047	4779	13827
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13835	38.712	NaN	1185.9	30	0	199.15	0.141			+	3456	ASRLPVHL	8	44	446.77044677734375	NaN	0	446.77044677734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASRLPVHL_	REV__ENSG00000166348|ENST00000687698|USP54;REV__nc|ENSG00000166348|Q70EL1-10|USP54;REV__nc|ENSG00000166348|Q70EL1-7|USP54;REV__nc|ENSG00000166348|Q70EL1-8|USP54;REV__nc|ENSG00000166348|Q70EL1-9|USP54	29.14955571784316	1.7418937515398478	5				NaN	NaN	0	NaN	9051	4782	13834
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13852	38.756	NaN	5325.8	30	0	1003.8	0.143	+			38722	SSLFSLLSK	9	64	491.2845404602049	980.5545279872098	2	491.28521728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSLFSLLSK_	ENSG00000141627|ENST00000675505|DYM	87.69643885390035	0.07135982304947239	5				NaN	NaN	0	NaN	9062	4788	13851
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13881	38.85	NaN	1441.4	30	0	265.54	0.144	+			48496	VTNDFVMLK	9	56	533.7831154754501	1065.5516780177002	2	533.7844848632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTNDFVMLK_	ENSG00000100316|ENST00000216146|RPL3;ENST00000417615.1_1_14:99439218-99439536:-|nuORF;ENST00000473638.5_1_22:39708982-39709710:-|nuORF	68.84614121027924	0.14577793175421136	5				NaN	NaN	0	NaN	9076	4803	13880
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13910	38.944	NaN	819.07	30	0	72.357	0.143	+			17792	IETTGTYQL	9	35	513.2615941569591	1024.508635380718	2	513.2620239257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IETTGTYQL_	ENSG00000007171|ENST00000313735|NOS2;nc|ENSG00000007171|P35228-2|NOS2;NOS2|p.A650Pfs*53|1|0.21|ENSG00000007171|chr17:27769063-27769063|C/-|frameshift_variant;NOS2|p.Y709*|1|0.33|ENSG00000007171|chr17:27767745-27767745|G/-|frameshift_variant	44.377184641726394	0.36891676396732553	5				NaN	NaN	0	NaN	9090	4818	13909
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13919	38.966	NaN	2689.9	30	0	626.75	0.143	+			39512	STFNVFVGK	9	57	499.76931422331535	997.5240755134307	2	499.7691345214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STFNVFVGK_	ENSG00000122642|ENST00000242209|FKBP9;ENST00000494374.5_1_7:32997059-33028356:+|nuORF;FKBP9|p.N129Ifs*10|7|0.31|ENSG00000122642|chr7:32975192-32975192|C/-|frameshift_variant;FKBP9|p.P380Lfs*6|1|0.38|ENSG00000122642|chr7:32996258-32996258|C/-|frameshift_variant;nc|ENSG00000122642|O95302-3|FKBP9	61.691277971877994	0.19951612995419254	5				NaN	NaN	0	NaN	9096	4821	13918
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13927	39	NaN	1262.1	30	0	113.01	0.144			+	-1	LIQSSLNMF	9	54	534.7725598547996	NaN	0	534.772705078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LIQSSLNM(Oxidation (M))F_	REV__NBAS|p.Y1476Mfs*33|1|0.28|ENSG00000151779|chr2:15328234-15328234|A/-|frameshift_variant	56.72105179125745	0.16330365735109603	5				NaN	NaN	0	NaN	9098	4827	13926
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13960	39.115	NaN	26694	30	0	6999.7	0.143	+			37140	SITSVFITK	9	67	498.2923249355815	994.5700969379631	2	498.2921447753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SITSVFITK_	ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;TRRAP-ASNS|1|fusion;TRRAP-ASNS|2|fusion;TRRAP|p.K3443Sfs*19|1|0.28|ENSG00000196367|chr7:99004246-99004246|A/-|frameshift_variant	176.44474024533739	0.0016668318535579616	5				NaN	NaN	0	NaN	9113	4845	13959
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14028	39.332	NaN	2019.3	30	0	424.18	0.143	+			50391	YAAEYANAL	9	46	493.2352562171622	NaN	0	493.2351379394531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YAAEYANAL_	ENSG00000140274|ENST00000323030|DUOXA2	76.7741389293348	0.08243745921263976	5				NaN	NaN	0	NaN	9148	4878	14027
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14061	39.454	NaN	869.39	30	0	204.06	0.143	+			37521	SLLNLPPLE	9	35	498.2923249355815	994.5700969379631	2	498.29296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLLNLPPLE_	ENSG00000188738|ENST00000424728|FSIP2;FSIP2|p.D5579Mfs*10|1|0.09|ENSG00000188738|chr2:185806029-185806029|A/-|frameshift_variant;FSIP2|p.K6152Rfs*27|1|0.43|ENSG00000188738|chr2:185807758-185807758|A/-|frameshift_variant;FSIP2|p.K6528Nfs*5|1|0.33|ENSG00000188738|chr2:185808884-185808884|A/-|frameshift_variant;FSIP2|p.V5734Yfs*24|2|0.23|ENSG00000188738|chr2:185806499-185806499|A/-|frameshift_variant;FSIP2|p.V6322*|1|0.42|ENSG00000188738|chr2:185808265-185808265|A/-|frameshift_variant;nc|ENSG00000188738|Q5CZC0-2|FSIP2	35.61828744233558	0.47037581924408073	5				NaN	NaN	0	NaN	9160	4899	14060
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14091	39.546	NaN	2377.9	30	0	1051.6	0.144	+			29112	NTQDVLIFK	9	60	539.3007812639196	1076.587009594639	2	539.3011474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NTQDVLIFK_	ENSG00000156958|ENST00000560031|GALK2;nc|ENSG00000156958|Q01415-2|GALK2	145.15565482312357	0.00806134135205793	5				NaN	NaN	0	NaN	9175	4914	14090
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14103	39.582	NaN	1289.5	30	0	97.02	0.142	+			42727	TDGKVFQF	8	52	471.2402191690751	940.4658854049502	2	471.74188232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TDGKVFQF_	ENSG00000114391|ENST00000394077|RPL24	45.9519527083369	0.6193794311207887	5				NaN	NaN	0	NaN	9181	4920	14102
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14152	39.727	NaN	2164.2	30	0	551.71	0.143			+	41960	SVVWPHRL	8	57	497.28496335337746	992.555373773555	2	497.284423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVVWPHRL_	REV__ENSG00000159792|ENST00000291041|PSKH1	47.91560031466742	0.6071945918984287	5				NaN	NaN	0	NaN	9209	4941	14151
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14161	39.762	NaN	1579.8	30	0	199.67	0.143	+			16052	HAVVNLINY	9	50	521.7877261377541	1041.5608993423082	2	521.7880249023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HAVVNLINY_	CTNNB1|p.L301Hfs*16|1|0.05|ENSG00000168036|chr3:41225827-41225831|TTCAA/-|frameshift_variant;CTNNB1|p.M271Wfs*5|1|0.08|ENSG00000168036|chr3:41225733-41225733|A/-|frameshift_variant;ENSG00000168036|ENST00000349496|CTNNB1	37.15910966729921	0.4535818937225704	5				NaN	NaN	0	NaN	9212	4947	14160
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14175	39.8	NaN	1910.9	30	0	220.39	0.143	+			35538	SAVLFTITK	9	52	490.29475499484727	978.5749570564946	2	490.29571533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAVLFTITK_	ENSG00000177189|ENST00000379565|RPS6KA3;RPS6KA3|p.N713Rfs*13|1|0.08|ENSG00000177189|chrX:20155483-20155484|-/AGCACAAGTTC|frameshift_variant	68.84614121027924	0.14577793175421136	5				NaN	NaN	0	NaN	9220	4953	14174
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14207	39.896	NaN	700.94	30	0	155.32	0.141			+	37320	SLDSSGGRL	9	33	446.232367113624	NaN	0	446.232421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLDSSGGRL_	REV__ENSG00000134250|ENST00000256646|NOTCH2;REV__NOTCH2|p.D1846G|1|0.35|ENSG00000134250|chr1:119919556-119919556|T/C|missense_variant;REV__NOTCH2|p.I2304Hfs*9|1|0.38|ENSG00000134250|chr1:119915812-119915813|-/G|frameshift_variant	34.172542307311794	0.30503706118289736	5				NaN	NaN	0	NaN	9237	4968	14206
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14257	40.094	NaN	3142.6	30	0	1169.5	0.142	+			18879	IVGTVLIIK	9	55	478.33137714023894	954.6482013472779	2	478.3311462402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IVGTVLIIK_	ENSG00000231389|ENST00000419277|HLA-DPA1	101.60071028292904	0.0375685401170269	5				NaN	NaN	0	NaN	9254	5001	14256
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14277	40.153	NaN	1783.6	30	0	215.48	0.144	+			28042	NAAKVFNLY	9	49	520.2825759657496	1038.5505989982992	2	520.283447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAAKVFNLY_	ENSG00000092964|ENST00000521913|DPYSL2;nc|ENSG00000092964|Q16555-2|DPYSL2;nc|ENSG00000092964|Q16555|DPYSL2	85.16082228582465	0.07850854922700509	5				NaN	NaN	0	NaN	9265	5010	14276
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14294	40.208	NaN	2530.1	30	0	641.77	0.214			+	21279	KLPQTVESF	9	55	524.7873529505283	1047.5601529678565	2	524.7879638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KLPQTVESF_	REV__ENSG00000178234|ENST00000430044|GALNT11;REV__GALNT11|p.K54Nfs*26|1|0.38|ENSG00000178234|chr7:152094383-152094383|A/-|frameshift_variant;REV__nc|ENSG00000178234|Q8NCW6-2|GALNT11	30.503639358989545	0.5181749237905803	5				NaN	NaN	0	NaN	9273	5019	14293
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14295	40.212	NaN	1253.2	30	0	154.41	0.034	+			35916	SEFPIRTL	8	39	481.7693818009382	961.5242106686765	2	481.7699890136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEFPIRTL_	CKAP5|p.V1971Lfs*42|1|0.03|ENSG00000175216|chr11:46744211-46744212|-/TTGAAAAAAAG|frameshift_variant;ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5	40.77816245573522	0.6514838689002179	5				NaN	NaN	0	NaN	9274	5019	14293
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14312	40.254	NaN	5905.7	30	0	1171	0.214	+			7309	DASKVVTVF	9	58	483.2684906476013	964.5224283620026	2	483.2694396972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DASKVVTVF_	ENSG00000071127|ENST00000499869|WDR1;ENST00000502962.5_1_4:10077004-10094774:-|nuORF;ENST00000515743.5_1_4:10078742-10093271:-|nuORF;nc|ENSG00000071127|O75083-3|WDR1	92.23892857375223	0.05855307001735979	5				NaN	NaN	0	NaN	9285	5025	14311
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14313	40.257	NaN	1075.3	30	0	147.31	0.033				-1	LSQTGLCL	8	40	446.23230838953407	NaN	0	446.232421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LSQTGLC(Carbamidomethyl (C))L_	ENST00000361722.7_1_17:45788235-45788682:+|nuORF	42.47446043378293	1.7418937515398478	5				NaN	NaN	0	NaN	9286	5025	14311
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14327	40.294	NaN	2808	30	0	699.11	0.142	+			35717	SDLKVIVM	8	45	452.76174628362236	903.5089396340447	2	452.7613525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SDLKVIVM_	ENSG00000109606|ENST00000336812|DHX15	60.97194046774394	0.49215940876911696	5				NaN	NaN	0	NaN	9294	5031	14326
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14334	40.313	NaN	1143.2	30	0	272.89	0.214	+			45879	VANPNSAIF	9	42	466.7455551022378	931.4765572712756	2	466.7448425292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VANPNSAIF_	ENSG00000106682|ENST00000265753|EIF4H;nc|ENSG00000106682|Q15056-2|EIF4H	56.72105179125745	0.24094814563026265	5				NaN	NaN	0	NaN	9298	5034	14333
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14335	40.316	NaN	767.49	30	0	69.888	0.034	+			33617	RLSEKSVE	8	40	474.2629699707031	NaN	0	474.2629699707031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RLSEKSVE_	nc|ENSG00000120802|P42166|TMPO	31.954861631926434	1.7418937515398478	5				NaN	NaN	0	NaN	9299	5034	14333
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14359	40.402	NaN	1331	30	0	250.28	0.214	+			1289	AESKVFYL	8	44	478.75792637148953	955.5012998097791	2	478.75762939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AESKVFYL_	ENSG00000164924|ENST00000395958|YWHAZ;ENST00000392459.3_1_6:127676988-127677414:+|nuORF;ENST00000440317.1_1_2:127315208-127315727:-|nuORF;ENST00000480304.5_1_8:101936173-101961117:-|nuORF;ENST00000517727.5_1_8:101936341-101962760:-|nuORF;nc|ENSG00000164924|P63104-2|YWHAZ	45.9519527083369	0.6193794311207887	5				NaN	NaN	0	NaN	9308	5049	14358
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14360	40.406	NaN	806.52	30	0	178.4	0.034	+			8684	EEAEGLAAAL	10	35	487.2449035644531	NaN	0	487.2449035644531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EEAEGLAAAL_	ENSG00000198205|ENST00000358697|ZXDA;ZXDA|p.F774Sfs*19|1|0.34|ENSG00000198205|chrX:57908100-57908100|A/-|frameshift_variant;ZXDA|p.G678Wfs*16|1|0.83|ENSG00000198205|chrX:57908389-57908390|-/A|frameshift_variant	44.116797842482775	0.3427969396372342	5				NaN	NaN	0	NaN	9309	5049	14358
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14388	40.522	NaN	1737.1	30	0	304.95	0.142	+			23588	LALVTIVKT	9	58	479.3207080092395	956.6268630852791	2	479.3209228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LALVTIVKT_	ENSG00000213949|ENST00000282588|ITGA1;ITGA1|p.F633Lfs*11|1|0.19|ENSG00000213949|chr5:52915500-52915500|T/-|frameshift_variant;ITGA1|p.N687Kfs*19|1|0.18|ENSG00000213949|chr5:52918798-52918799|-/A|frameshift_variant	56.72105179125745	0.24094814563026265	5				NaN	NaN	0	NaN	9316	5070	14387
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14405	40.575	NaN	2178.8	30	0	284.98	0.142	+			40638	SVAQLLLSK	9	54	479.80016670599167	957.5857804787834	2	479.79962158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVAQLLLSK_	ENSG00000073614|ENST00000399788|KDM5A;ENST00000541335.1_1_12:431581-432275:-|nuORF;KDM5A|p.G1200Dfs*9|1|0.28|ENSG00000073614|chr12:307787-307787|T/-|frameshift_variant;KDM5A|p.V1093*|1|0.32|ENSG00000073614|chr12:309905-309905|T/-|frameshift_variant;KDM5A|p.V1093Sfs*20|1|0.21|ENSG00000073614|chr12:309904-309905|-/T|frameshift_variant;nc|ENSG00000073614|P29375-2|KDM5A	65.15724298150197	0.17062369902793603	5				NaN	NaN	0	NaN	9324	5079	14404
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14433	40.669	NaN	2220.9	30	0	178.47	0.143	+			8471	EASKLLLTY	9	49	519.2977536253709	1036.5809543175417	2	519.297607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EASKLLLTY_	ENSG00000151092|ENST00000280700|NGLY1;ENST00000463611.1_1_3:25824608-25824881:-|nuORF;ENST00000474611.1_1_3:25819310-25824959:-|nuORF;ENST00000478991.1_1_3:25819998-25824881:-|nuORF;ENST00000493324.5_1_3:25778798-25824881:-|nuORF;nc|ENSG00000151092|Q96IV0-2|NGLY1;nc|ENSG00000151092|Q96IV0-3|NGLY1;NGLY1|p.I101Nfs*3|1|0.22|ENSG00000151092|chr3:25764256-25764257|-/T|frameshift_variant	90.36981228632155	0.0638227155548745	5				NaN	NaN	0	NaN	9337	5094	14432
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14489	40.957	NaN	886	30	0	137.58	0.143	+			4161	ATFFGEVVK	9	38	499.2719002376197	996.5292475420395	2	499.2718200683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATFFGEVVK_	ENSG00000183527|ENST00000331573|PSMG1;nc|ENSG00000183527|O95456-2|PSMG1;PSMG1|p.T194Hfs*13|1|0.12|ENSG00000183527|chr21:39178524-39178524|T/-|frameshift_variant	37.81151784470057	0.4459294069877048	5				NaN	NaN	0	NaN	9360	5127	14488
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14621	41.494	NaN	1200.7	30	0	214.47	0.142			+	28962	NSESLLGVF	9	38	483.25066328533165	964.4867736374633	2	483.2505187988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NSESLLGVF_	REV__nc|ENSG00000148690|Q70Z53-4|FRA10AC1	44.116797842482775	0.37197099687881774	5				NaN	NaN	0	NaN	9399	5220	14620
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14657	41.649	NaN	1803.5	30	0	182.6	0.144	+			27521	MPAAQEGAVAF	11	55	546.2628784445383	1090.5112039558765	2	546.2634887695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MPAAQEGAVAF_	ENSG00000231925|ENST00000434618|TAPBP;ENST00000480730.5_1_6:33272736-33281818:-|nuORF;nc|ENSG00000231925|O15533-2|TAPBP;nc|ENSG00000231925|O15533-3|TAPBP;nc|ENSG00000231925|O15533-4|TAPBP	32.75053402867276	0.6462648045997152	5				NaN	NaN	0	NaN	9408	5247	14656
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14742	42.049	NaN	1250.5	30	0	179.45	0.143	+			38093	SPTTIQVTY	9	47	505.26400106644786	NaN	0	505.2643127441406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SPTTIQVTY_	ENSG00000143612|ENST00000368521|C1orf43;ENST00000483282.1_1_1:154179931-154180985:-|nuORF;nc|nan|Q9BWL3-2|C1orf43;nc|nan|Q9BWL3-4|C1orf43	68.78682469695295	0.1118430353446351	5				NaN	NaN	0	NaN	9421	5319	14741
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14793	42.285	NaN	2522.8	30	0	262.9	0.143	+			41105	SVINVFVGR	9	57	495.79058059177	989.56660825034	2	495.79071044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVINVFVGR_	ENSG00000135540|ENST00000343505|NHSL1;nc|ENSG00000135540|Q5SYE7|NHSL1;NHSL1|p.E1312Gfs*27|1|0.12|ENSG00000135540|chr6:138430422-138430423|-/C|frameshift_variant;NHSL1|p.I1199Ffs*26|1|0.44|ENSG00000135540|chr6:138430763-138430763|G/-|frameshift_variant;NHSL1|p.P932Rfs*70|1|0.13|ENSG00000135540|chr6:138431562-138431562|G/-|frameshift_variant	114.8945686534367	0.024290463251177924	5				NaN	NaN	0	NaN	9430	5361	14792
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14798	42.302	NaN	2719.4	30	0	1159.4	0.144	+			30597	QAQEVFFLK	9	61	555.3033071052866	1108.5920612773732	2	555.3052368164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QAQEVFFLK_	ENSG00000170248|ENST00000307296|PDCD6IP;ENST00000459659.1_1_3:33863478-33868168:+|nuORF;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP;nc|ENSG00000170248|Q8WUM4-3|PDCD6IP;PDCD6IP|p.F351Nfs*37|1|0.08|ENSG00000170248|chr3:33836259-33836260|-/AATCC|frameshift_variant	49.44154591367651	0.3095138337212152	5				NaN	NaN	0	NaN	9432	5364	14797
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14816	42.383	NaN	1867.3	30	0	514.28	0.143	+			18289	IPNEIIHAL	9	48	510.2982688908448	1018.5819848484896	2	510.2978210449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IPNEIIHAL_	ENSG00000099783|ENST00000325495|HNRNPM;HNRNPM|p.M346Wfs*22|1|0.25|ENSG00000099783|chr19:8473699-8473699|A/-|frameshift_variant	75.04331003522576	0.118981335847003	5				NaN	NaN	0	NaN	9435	5379	14815
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14857	42.553	NaN	1331.5	30	0	204.7	0.144	+			30745	QDLLQLQY	8	42	510.7716695072991	1019.5287860813983	2	510.77203369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QDLLQLQY_	ENSG00000140575|ENST00000268182|IQGAP1;ENSG00000183856|ENST00000361170|IQGAP3;ENST00000561086.1_1_15:91040446-91043337:+|nuORF	44.116797842482775	0.6307669463330267	5				NaN	NaN	0	NaN	9446	5409	14856
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14928	42.872	NaN	2262.9	30	0	482.24	0.142	+			11638	FQGASNLTL	9	48	475.75103717999724	949.4875214267945	2	475.7503662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FQGASNLTL_	DDX18|p.K110Efs*11|1|0.42|ENSG00000088205|chr2:117817678-117817679|-/A|frameshift_variant;ENSG00000088205|ENST00000263239|DDX18	85.16082228582465	0.07850854922700509	5				NaN	NaN	0	NaN	9460	5466	14927
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14946	42.939	NaN	2024.6	30	0	578.53	0.143	+			2320	AMLDTVVFK	9	49	512.2803731979643	1022.5461934627286	2	512.281494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AMLDTVVFK_	ENSG00000115233|ENST00000409682|PSMD14;ENST00000477232.5_1_2:162241962-162267908:+|nuORF;ENST00000492908.1_1_2:162265323-162267908:+|nuORF	93.19546047674547	0.05585629608842056	5				NaN	NaN	0	NaN	9466	5478	14945
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15008	43.237	NaN	853.49	30	0	164.47	0.143	+			10682	EYTAKIALL	9	43	511.30087815198175	NaN	0	511.299560546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EYTAKIALL_	ENSG00000092820|ENST00000367075|EZR	71.29570347882199	0.10120983364817086	5				NaN	NaN	0	NaN	9474	5532	15007
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15066	43.498	NaN	1822.1	30	0	869.12	0.145	+			11118	FFREERGVH	9	50	588.8008110716037	1175.5870692100073	2	588.80126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FFREERGVH_	ENSG00000126562|ENST00000246914|WNK4;nc|ENSG00000126562|Q96J92-2|WNK4;nc|ENSG00000126562|Q96J92-3|WNK4;WNK4|p.L778Sfs*157|1|0.58|ENSG00000126562|chr17:42794646-42794646|C/-|frameshift_variant;WNK4|p.R467Afs*194|2|0.56|ENSG00000126562|chr17:42785399-42785399|G/-|frameshift_variant;WNK4|p.S637Pfs*14|1|0.42|ENSG00000126562|chr17:42788172-42788173|TT/-|frameshift_variant;WNK4|p.V1234*|1|0.28|ENSG00000126562|chr17:42796545-42796545|G/-|frameshift_variant;WNK4|p.V608Cfs*53|4|0.4|ENSG00000126562|chr17:42787852-42787852|G/-|frameshift_variant	29.170058357718403	0.5306379469863586	5				NaN	NaN	0	NaN	9484	5580	15065
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15512	45.621	NaN	2294.1	30	0	496.47	0.143	+			41305	SVLNLVIVK	9	53	492.8264081022525	983.638263271305	2	493.32781982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVLNLVIVK_	ENSG00000137154|ENST00000380394|RPS6;ENST00000464444.1_1_19:13005132-13005321:+|nuORF	117.81106730687013	0.02252488733980868	5				NaN	NaN	0	NaN	9546	5964	15511
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15558	45.841	NaN	1461.7	30	0	195.97	0.141	+			50905	YGGGFGGGGF	10	40	438.18777375209345	NaN	0	438.1875305175781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YGGGFGGGGF_	CON__P02535-1;REV__CON__Q6IFZ6	120.057497431939	0.019003024086943467	5				NaN	NaN	0	NaN	9553	6003	15557
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15639	46.243	NaN	601.96	30	0	76.53	0.143			+	42583	TASSLFLHL	9	34	494.7769775390625	NaN	0	494.7769775390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TASSLFLHL_	REV__ENSG00000152463|ENST00000378228|OLAH;REV__nc|ENSG00000152463|Q9NV23-2|OLAH;REV__OLAH|p.K164Sfs*10|2|0.24|ENSG00000152463|chr10:15065666-15065666|C/-|frameshift_variant;REV__OLAH|p.N251Ifs*6|1|0.13|ENSG00000152463|chr10:15073182-15073183|-/TTGTATTC|frameshift_variant	52.29916861842294	0.1908481487866478	5				NaN	NaN	0	NaN	9559	6078	15638
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15946	47.755	NaN	1603.1	30	0	417.76	0.14	+			43570	TIATVLIS	8	39	409.2552392889751	816.4959256447502	2	409.2552185058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TIATVLIS_	ENSG00000196098|ENST00000354924|OR5K4	85.35947970620816	0.2915182781752196	5				NaN	NaN	0	NaN	9587	6357	15945
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16265	49.318	NaN	1083.1	30	0	656.91	0.138				-1	 	0	18	340.2593851568794	678.5042173805588	2	340.2594299316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9618	6645	16264
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2145	11.343	NaN	7117.4	30	0	4647.7	0.143	+			4845	ATPKKSIKK	9	33	500.82971142533404	999.6448699174681	2	500.82989501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATPKKSIKK_	ENSG00000124575|ENST00000244534|H1-3	61.691277971877994	0.19951612995419254	5				NaN	NaN	0	NaN	2	2141	2144
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2150	11.359	NaN	1977.6	30	0	1304.8	0.143	+			2119	ALHPILPLK	9	25	334.5560117873547	NaN	0	334.2220764160156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ALHPILPLK_	ENST00000460833.1_1_3:64670856-64785255:+|nuORF;ENST00000485174.5_1_3:64670856-64727150:+|nuORF	19.996771675451527	0.3693019437812985	5				NaN	NaN	0	NaN	4	2144	2149
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2199	11.596	NaN	32881	30	0	10405	0.142	+			3510	ASSKDAIKK	9	84	474.27956556034763	946.5445781874953	2	474.27960205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASSKDAIKK_	DSTN|p.Y117H|1|0.26|ENSG00000125868|chr20:17604592-17604592|T/C|missense_variant;ENSG00000125868|ENST00000246069|DSTN;ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000400899.2_1_1:11051144-11051557:-|nuORF;ENST00000530945.1_1_11:65623104-65623215:-|nuORF;nc|ENSG00000125868|P60981-2|DSTN;nc|ENSG00000165410|Q9Y281-3|CFL2	117.5257442709337	0.022697614825424036	5				NaN	NaN	0	NaN	8	2189	2198
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2206	11.617	NaN	6097.3	30	0	1970.9	0.214	+			30125	PRRGEARQ	8	52	485.2706037272044	968.5266545212088	2	485.27069091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PRRGEARQ_	ENST00000545260.5_2_10:35104082-35104166:-|nuORF	63.30626980617807	0.4690498839812213	5				NaN	NaN	0	NaN	12	2192	2205
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2207	11.62	NaN	9682.1	30	0	2658.5	0.035			+	21105	KKQTNKKK	8	59	501.82445709992805	1001.6343612666561	2	501.8243103027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KKQTNKKK_	REV__ENST00000395442.5_1_10:55568369-55568990:-|nuORF	96.19043198914106	0.25873003980794995	5				NaN	NaN	0	NaN	13	2192	2205
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2219	11.646	NaN	2931.6	30	0	776.88	0.214	+			38685	SSKDAIKK	8	45	438.7609139269258	NaN	0	438.7608337402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSKDAIKK_	DSTN|p.Y117H|1|0.26|ENSG00000125868|chr20:17604592-17604592|T/C|missense_variant;ENSG00000125868|ENST00000246069|DSTN;ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000400899.2_1_1:11051144-11051557:-|nuORF;ENST00000530945.1_1_11:65623104-65623215:-|nuORF;ENST00000602547.1_1_12:6994092-6994545:+|nuORF;nc|ENSG00000125868|P60981-2|DSTN;nc|ENSG00000165410|Q9Y281-3|CFL2	93.1432384553994	1.7418937515398478	5				NaN	NaN	0	NaN	22	2195	2218
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2220	11.65	NaN	776.95	30	0	198.41	0.106	+			36601	SGAVLSKK	8	27	395.2450186407869	NaN	0	395.2449951171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SGAVLSKK_	ENST00000413631.1_1_13:111590511-111591024:+|nuORF	47.91560031466742	1.7418937515398478	5				NaN	NaN	0	NaN	23	2195	2218
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2221	11.651	NaN	1841	30	0	311.13	0.106	+			31956	QQSKSQKQ	8	48	481.25672678921217	960.4989006452244	2	481.25665283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QQSKSQKQ_	ENSG00000101251|ENST00000284951|SEL1L2;nc|ENSG00000101251|Q5TEA6-2|SEL1L2;SEL1L2|p.Y361Tfs*29|1|0.04|ENSG00000101251|chr20:13876061-13876061|A/-|frameshift_variant	64.20726635412375	0.4601301477144759	5				NaN	NaN	0	NaN	24	2195	2218
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2222	11.653	NaN	3921.2	30	0	1520.7	0.106			+	-1	TIKFKKMI	8	43	512.8157466988531	1023.6169404645062	2	512.8154907226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_TIKFKKM(Oxidation (M))I_	REV__ENSG00000084453|ENST00000683939|SLCO1A2;REV__ENST00000463718.5_1_12:21428225-21457481:-|nuORF;REV__nc|ENSG00000084453|P46721-2|SLCO1A2;REV__SLCO1A2|p.I449Yfs*29|1|0.16|ENSG00000084453|chr12:21294037-21294037|T/-|frameshift_variant	19.359975847455235	0.7988239741663654	5				NaN	NaN	0	NaN	25	2195	2218
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2223	11.655	NaN	357.07	30	0	149.63	0.106	+			47564	VREKENNP	8	14	493.2575988769531	NaN	0	493.2575988769531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VREKENNP_	ENSG00000173120|ENST00000529006|KDM2A;KDM2A|p.G855Efs*24|2|0.34|ENSG00000173120|chr11:67250589-67250589|G/-|frameshift_variant;KDM2A|p.R834Vfs*3|1|0.38|ENSG00000173120|chr11:67250525-67250525|C/-|frameshift_variant;nc|ENSG00000173120|Q9Y2K7-2|KDM2A;nc|ENSG00000173120|Q9Y2K7-4|KDM2A;nc|ENSG00000173120|Q9Y2K7-5|KDM2A	10.865556482863946	1.7418937515398478	5				NaN	NaN	0	NaN	26	2195	2218
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2224	11.657	NaN	2856.5	30	0	1317.5	0.106	+			34937	SAAKAVKPK	9	45	450.28725597411744	898.5599590150349	2	450.2872314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SAAKAVKPK_	ENSG00000187837|ENST00000343677|H1-2	72.87924865735499	0.12833875048249987	5				NaN	NaN	0	NaN	27	2195	2218
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2225	11.659	NaN	1532.5	30	0	688.73	0.035			+	37973	SPHLMSKKL	9	16	520.7992322463843	1039.5839115595686	2	520.7994995117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SPHLMSKKL_	REV__DSEL|p.L827Wfs*85|1|0.11|ENSG00000171451|chr18:67512159-67512159|A/-|frameshift_variant;REV__DSEL|p.R969Efs*16|1|0.36|ENSG00000171451|chr18:67511734-67511734|T/-|frameshift_variant;REV__DSEL|p.R969Kfs*4|1|0.26|ENSG00000171451|chr18:67511733-67511734|-/T|frameshift_variant;REV__ENSG00000171451|ENST00000310045|DSEL	7.690282842768113	0.6112419832031293	5				NaN	NaN	0	NaN	28	2195	2218
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2272	11.858	NaN	1309.6	30	0	123.49	0.144	+			38994	SSSEPVHAKK	10	49	535.2861621041936	1068.5577712751872	2	535.2864379882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSSEPVHAKK_	ENSG00000173145|ENST00000371361|NOC3L;NOC3L|p.K235Nfs*2|1|0.43|ENSG00000173145|chr10:94353049-94353049|T/-|frameshift_variant;NOC3L|p.L425Yfs*3|1|0.14|ENSG00000173145|chr10:94346540-94346540|A/-|frameshift_variant;NOC3L|p.T423Hfs*5|1|0.09|ENSG00000173145|chr10:94346547-94346547|T/-|frameshift_variant	120.30596017624542	0.026897611020491978	5				NaN	NaN	0	NaN	39	2231	2271
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2290	11.937	NaN	1630.1	30	0	547.16	0.142	+			3511	ASSKDAIKK	9	48	474.27956556034763	946.5445781874953	2	474.280517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASSKDAIKK_	DSTN|p.Y117H|1|0.26|ENSG00000125868|chr20:17604592-17604592|T/C|missense_variant;ENSG00000125868|ENST00000246069|DSTN;ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000400899.2_1_1:11051144-11051557:-|nuORF;ENST00000530945.1_1_11:65623104-65623215:-|nuORF;nc|ENSG00000125868|P60981-2|DSTN;nc|ENSG00000165410|Q9Y281-3|CFL2	46.45678178249821	0.34452392205506005	5				NaN	NaN	0	NaN	42	2246	2289
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2308	12.017	NaN	856.19	30	0	255.54	0.143			+	33504	RKLQTTKK	8	24	501.82445709992805	1001.6343612666561	2	501.82373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RKLQTTKK_	REV__ENSG00000155761|ENST00000336338|SPAG17;REV__SPAG17|p.L1608Ifs*4|1|0.34|ENSG00000155761|chr1:117996698-117996699|-/T|frameshift_variant;REV__SPAG17|p.Q1264Rfs*3|1|0.29|ENSG00000155761|chr1:118025357-118025357|G/-|frameshift_variant;REV__SPAG17|p.T1729Lfs*21|2|0.43|ENSG00000155761|chr1:117992642-117992642|T/-|frameshift_variant	21.9598887501803	0.7897753010812679	5				NaN	NaN	0	NaN	45	2261	2307
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2315	12.049	NaN	2746.4	30	0	805.96	0.143			+	9777	ENPSAGNKLL	10	35	521.7806513875527	NaN	0	521.7811279296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ENPSAGNKLL_	REV__ENSG00000029534|ENST00000289734|ANK1;REV__KIAA0146-ANK1|1|fusion;REV__KIAA0146-ANK1|2|fusion;REV__KIAA0146-ANK1|3|fusion;REV__KIAA0146-ANK1|4|fusion;REV__KIAA0146-ANK1|5|fusion;REV__nc|ENSG00000029534|P16157-10|ANK1;REV__nc|ENSG00000029534|P16157-11|ANK1;REV__nc|ENSG00000029534|P16157-12|ANK1;REV__nc|ENSG00000029534|P16157-13|ANK1;REV__nc|ENSG00000029534|P16157-14|ANK1;REV__nc|ENSG00000029534|P16157-15|ANK1;REV__nc|ENSG00000029534|P16157-16|ANK1;REV__nc|ENSG00000029534|P16157-2|ANK1;REV__nc|ENSG00000029534|P16157-21|ANK1;REV__nc|ENSG00000029534|P16157-4|ANK1;REV__nc|ENSG00000029534|P16157-5|ANK1;REV__nc|ENSG00000029534|P16157-6|ANK1;REV__nc|ENSG00000029534|P16157-7|ANK1;REV__nc|ENSG00000029534|P16157-8|ANK1;REV__nc|ENSG00000029534|P16157-9|ANK1;REV__nc|ENSG00000029534|P16157|ANK1	33.921630207806714	0.38879399011744475	5				NaN	NaN	0	NaN	46	2267	2314
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2330	12.113	NaN	2343.9	30	0	784.38	0.143			+	24853	LKDRKRPE	8	44	521.3114039337155	1040.608254934231	2	522.283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LKDRKRPE_	REV__ENSG00000103932|ENST00000304330|RPAP1;REV__nc|ENSG00000103932|Q9BWH6-2|RPAP1;REV__RPAP1|p.S869Qfs*34|1|0.48|ENSG00000103932|chr15:41522902-41522903|-/G|frameshift_variant	25.57405402267927	0.7618694492699909	5				NaN	NaN	0	NaN	49	2279	2329
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2335	12.13	NaN	7944.1	30	0	2186.1	0.214	+			42225	TAAKSITKK	9	65	474.2983563415989	946.5821597499978	2	474.2982482910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAAKSITKK_	ENSG00000133574|ENST00000255945|GIMAP4	143.37361013837676	0.008897369944672323	5				NaN	NaN	0	NaN	51	2282	2334
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2336	12.133	NaN	782.6	30	0	208.99	0.035	+			5883	AVKPKAAKPK	10	30	519.3463785636347	NaN	0	519.3475341796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVKPKAAKPK_	ENSG00000168298|ENST00000304218|H1-4;ENSG00000184357|ENST00000331442|H1-5;ENSG00000187837|ENST00000343677|H1-2	38.753607047826485	0.3729281687199363	5				NaN	NaN	0	NaN	52	2282	2334
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2348	12.181	NaN	6653.2	30	0	1918.5	0.144			+	39192	SSYVEYLVG	9	31	339.5029405924998	1015.4869923776994	3	339.5028991699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSYVEYLVG_	REV__ENSG00000153827|ENST00000675903|TRIP12;REV__nc|ENSG00000153827|Q14669-2|TRIP12;REV__nc|ENSG00000153827|Q14669-3|TRIP12;REV__nc|ENSG00000153827|Q14669-4|TRIP12;REV__nc|ENSG00000153827|Q14669|TRIP12;REV__TRIP12|p.H1434Afs*2|1|0.16|ENSG00000153827|chr2:229791143-229791144|-/T|frameshift_variant;REV__TRIP12|p.N880Kfs*36|1|0.21|ENSG00000153827|chr2:229804013-229804014|-/T|frameshift_variant;REV__TRIP12|p.S1195Lfs*24|6|0.27|ENSG00000153827|chr2:229796599-229796599|A/-|frameshift_variant;REV__TRIP12|p.Y1552Lfs*6|1|0.12|ENSG00000153827|chr2:229787620-229787621|-/A|frameshift_variant	20.94693142431847	0.6074874384046576	5				NaN	NaN	0	NaN	55	2291	2347
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2354	12.198	NaN	3483.8	30	0	1031.6	0.214	+			5392	ATYETKESKK	10	41	395.5433575555498	NaN	0	395.54345703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATYETKESKK_	ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65623404-65625570:-|nuORF;nc|ENSG00000165410|Q9Y281-3|CFL2	53.08895987439943	0.2860736266326207	5				NaN	NaN	0	NaN	58	2294	2353
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2355	12.202	NaN	1278.5	30	0	240.72	0.035	+			32112	QSILAKQQK	9	33	522.3153813426965	NaN	0	522.315673828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QSILAKQQK_	ENSG00000170248|ENST00000307296|PDCD6IP;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP;PDCD6IP|p.F351Nfs*37|1|0.08|ENSG00000170248|chr3:33836259-33836260|-/AATCC|frameshift_variant	40.05817265558897	0.275207446262312	5				NaN	NaN	0	NaN	59	2294	2353
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2366	12.248	NaN	5165.8	30	0	1614.9	0.144	+			5639	AVDAPRRHK	9	43	525.3022144016559	1048.5898758701117	2	525.3027954101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVDAPRRHK_	ENSG00000119912|ENST00000265986|IDE;ENST00000496903.5_1_10:94214203-94257457:-|nuORF;nc|ENSG00000119912|P14735-2|IDE	41.42661286455405	0.403525789677298	5				NaN	NaN	0	NaN	61	2303	2365
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2399	12.393	NaN	1019.5	30	0	256.15	0.144	+			22682	KVADHSGQVK	10	39	534.7945520557312	1067.5745511782623	2	534.7948608398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVADHSGQVK_	ENSG00000188243|ENST00000682242|COMMD6;ENST00000477377.1_1_13:76104099-76111947:-|nuORF;nc|ENSG00000188243|Q7Z4G1-2|COMMD6	72.2432373244024	0.2589930451692646	5				NaN	NaN	0	NaN	67	2330	2398
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2415	12.458	NaN	5017.8	30	0	1241.1	0.214	+			38824	SSNDKVIKK	9	47	340.20132394320603	1017.5821424298181	3	340.53533935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSNDKVIKK_	ALDH3A1|p.P445Rfs*6|4|0.31|ENSG00000108602|chr17:19738336-19738336|G/-|frameshift_variant;ENSG00000108602|ENST00000225740|ALDH3A1;ENST00000479677.6_1_17:19641536-19646703:-|nuORF	31.529811441608018	0.5085848003137583	5				NaN	NaN	0	NaN	71	2342	2414
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2416	12.462	NaN	4642.2	30	0	3087.7	0.037			+	-1	WDMWRLPK	8	38	383.19599538807125	1146.5661567644138	3	383.196044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_WDM(Oxidation (M))WRLPK_	REV__ENSG00000198910|ENST00000370060|L1CAM;REV__nc|ENSG00000198910|P32004-2|L1CAM;REV__nc|ENSG00000198910|P32004-3|L1CAM	30.503639358989545	0.7238069182250283	5				NaN	NaN	0	NaN	72	2342	2414
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2432	12.513	NaN	994.12	30	0	188.2	0.142			+	20298	KEPMETLK	8	43	488.26458586211726	974.5146187910345	2	488.2641296386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEPMETLK_	REV__LRRN3|p.L131M|1|0.19|ENSG00000173114|chr7:111123163-111123163|C/A|missense_variant	53.351449002276354	0.5676011784961348	5				NaN	NaN	0	NaN	79	2351	2431
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2442	12.561	NaN	969.24	30	0	267.5	0.142	+			22692	KVAGAATPKK	10	33	485.8059859689687	NaN	0	485.80584716796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVAGAATPKK_	ENSG00000124575|ENST00000244534|H1-3	61.691277971877994	0.22046696034287383	5				NaN	NaN	0	NaN	80	2360	2441
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2449	12.593	NaN	2170.6	30	0	346.4	0.145	+			40783	SVDPRRRNK	9	31	376.55137256718285	1126.6322883017485	3	376.55206298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVDPRRRNK_	ENSG00000167526|ENST00000311528|RPL13;ENST00000399461.8_1_16:89627605-89629447:+|nuORF;ENST00000484610.5_1_16:89627907-89629447:+|nuORF;ENST00000563749.1_1_16:89627907-89628201:+|nuORF;ENST00000565571.5_1_16:89627367-89628201:+|nuORF	19.996771675451527	0.6112419832031292	5				NaN	NaN	0	NaN	81	2366	2448
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2459	12.626	NaN	3085.3	30	0	1548.8	0.214	+			5346	ATVTKKVAK	9	50	473.30884032952156	944.6031277258431	2	473.30841064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATVTKKVAK_	ENSG00000187837|ENST00000343677|H1-2	77.31757898189308	0.1091473830098891	5				NaN	NaN	0	NaN	85	2372	2458
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2460	12.63	NaN	1370.5	30	0	372.33	0.037			+	-1	RIRFYLML	8	35	564.3236736339602	1126.6327943347203	2	564.324462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_RIRFYLM(Oxidation (M))L_	REV__ENSG00000105397|ENST00000525621|TYK2;REV__TYK2|p.L202Pfs*105|1|0.26|ENSG00000105397|chr19:10366441-10366442|-/G|frameshift_variant	21.70233525837049	0.7917639344264583	5				NaN	NaN	0	NaN	86	2372	2458
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2465	12.644	NaN	1295.1	30	0	224.21	0.143	+			19627	KDIMDLKQ	8	50	495.7699413002101	NaN	0	495.7698669433594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KDIMDLKQ_	ENSG00000166780|ENST00000300006|BMERB1;ENST00000567550.1_1_16:15528510-15675189:+|nuORF;nc|ENSG00000166780|Q96MC5-2|BMERB1	62.107414245175825	1.7418937515398478	5				NaN	NaN	0	NaN	88	2375	2464
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2489	12.742	NaN	46660	30	0	9161.5	0.214	+			33954	RSASSATQVHK	11	110	391.2106524901117	1170.6101280705352	3	391.210693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RSASSATQVHK_	ENST00000361272.8_2_8:17102747-17104366:-|nuORF	171.33049012695201	2.4609825723217833E-05	5				NaN	NaN	0	NaN	94	2393	2488
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2490	12.746	NaN	7471.7	30	0	1931.3	0.039			+	46118	VDHISEEFKK	10	42	411.2148423044863	1230.622697513659	3	411.2149963378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VDHISEEFKK_	REV__ENSG00000115808|ENST00000263918|STRN;REV__nc|ENSG00000115808|O43815-2|STRN	42.86426827375447	0.522752283233888	5				NaN	NaN	0	NaN	95	2393	2488
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2497	12.765	NaN	569.01	30	0	91.43	0.143	+			29150	NVFKNKWI	8	28	524.8023874925684	1047.5902220519367	2	524.8027954101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NVFKNKWI_	ENST00000429272.1_1_2:131051524-131051887:+|nuORF;ENST00000472309.1_1_4:179208113-179208287:+|nuORF	30.503639358989545	0.7238069182250283	5				NaN	NaN	0	NaN	99	2396	2496
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2514	12.822	NaN	3127.2	30	0	739.5	0.143	+			38997	SSSFIPQLV	9	29	326.51361083984375	NaN	0	326.51361083984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSSFIPQLV_	CEP295|p.F1469Yfs*47|1|0.31|ENSG00000166004|chr11:93699317-93699318|-/ATCCAGCC|frameshift_variant;CEP295|p.L2479Ffs*6|1|0.29|ENSG00000166004|chr11:93729651-93729651|A/-|frameshift_variant;ENSG00000166004|ENST00000325212|CEP295;nc|ENSG00000166004|Q9C0D2-3|CEP295	42.396135135203025	0.2590952873412954	5				NaN	NaN	0	NaN	107	2405	2513
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2519	12.839	NaN	1854.4	30	0	392.04	0.144	+			20982	KKFHFLKGA	9	43	538.3243885927583	1074.6342242523165	2	538.3256225585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KKFHFLKGA_	ENSG00000196208|ENST00000381486|GREB1;nc|ENSG00000196208|Q4ZG55-4|GREB1	71.87747018426188	0.13267044672804276	5				NaN	NaN	0	NaN	109	2408	2518
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2525	12.856	NaN	3606	30	0	611.89	0.214	+			17235	HVNITISAR	9	64	505.7915397063895	NaN	0	505.7914733886719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HVNITISAR_	ENST00000330258.3_2_X:63410065-63410188:-|nuORF	82.7504851949679	0.061958946529908215	5				NaN	NaN	0	NaN	112	2411	2524
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2526	12.859	NaN	1835	30	0	428.09	0.035	+			20912	KITNHPSNK	9	47	519.7886384006111	1037.5627238680222	2	519.78857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KITNHPSNK_	ENSG00000071655|ENST00000434436|MBD3;ENST00000590830.5_1_19:1578341-1584901:-|nuORF;nc|ENSG00000071655|O95983-2|MBD3	68.84614121027924	0.14577793175421136	5				NaN	NaN	0	NaN	113	2411	2524
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2532	12.875	NaN	1055.5	30	0	264.77	0.143	+			9575	ELHRTVQK	8	36	337.5298767089844	NaN	0	337.5298767089844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ELHRTVQK_	CNTRL|p.K1802Sfs*9|2|0.21|ENSG00000119397|chr9:121162247-121162247|A/-|frameshift_variant;ENSG00000119397|ENST00000373855|CNTRL;nc|ENSG00000119397|Q7Z7A1-2|CNTRL;nc|ENSG00000119397|Q7Z7A1-3|CNTRL;nc|ENSG00000119397|Q7Z7A1-5|CNTRL;REV__ENSG00000150656|ENST00000358821|CNDP1;REV__ENST00000582461.1_1_18:72245409-72251014:+|nuORF	25.57405402267927	1.7418937515398478	5				NaN	NaN	0	NaN	116	2414	2531
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2545	12.913	NaN	27769	30	0	20943	0.214	+			4854	ATPKKTVPK	9	54	485.308144374698	968.601735816196	2	485.308349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATPKKTVPK_	ENSG00000166197|ENST00000605788|NOLC1;nc|ENSG00000166197|Q14978-3|NOLC1	120.8684288430529	0.02067403653475984	5				NaN	NaN	0	NaN	123	2420	2544
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2546	12.916	NaN	5198.7	30	0	1880.8	0.036				-1	STKCETRVP	9	39	359.84855077463783	NaN	0	360.1835021972656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_STKC(Carbamidomethyl (C))ETRVP_	NCKAP5|p.S956C|1|0.11|ENSG00000176771|chr2:132783944-132783944|G/C|missense_variant	31.529811441608018	0.3183796599642538	5				NaN	NaN	0	NaN	124	2420	2544
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2558	12.942	NaN	937.33	30	0	191.23	0.141			+	32538	QVSPAEAR	8	39	429.2273770022327	856.4402010712654	2	429.2271728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QVSPAEAR_	REV__ENST00000391854.6_1_1:235812975-235813251:-|nuORF	56.72105179125745	0.5342425954139568	5				NaN	NaN	0	NaN	133	2423	2557
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2571	12.981	NaN	1695.2	30	0	244.5	0.214	+			36375	SETGAGKHV	9	46	443.2247986088411	NaN	0	443.224609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SETGAGKHV_	ENSG00000075886|ENST00000321253|TUBA3D;ENSG00000123416|ENST00000336023|TUBA1B;ENSG00000152086|ENST00000312988|TUBA3E;ENSG00000167552|ENST00000301071|TUBA1A;ENSG00000167553|ENST00000301072|TUBA1C;ENSG00000198033|ENST00000400113|TUBA3C;ENST00000530835.1_1_11:90015825-90016947:+|nuORF;ENST00000548363.1_1_12:49580068-49582762:-|nuORF;ENST00000550254.1_1_12:49580073-49582762:-|nuORF;ENST00000551324.5_1_12:49523262-49525083:-|nuORF;nc|ENSG00000123416|P68363-2|TUBA1B;nc|ENSG00000167552|Q71U36-2|TUBA1A;nc|ENSG00000198033|P0DPH7-2|TUBA3C;TUBA3C|p.G144Afs*24|1|0.32|ENSG00000198033|chr13:19177554-19177554|A/-|frameshift_variant;TUBA3C|p.T361Rfs*18|1|0.17|ENSG00000198033|chr13:19174136-19174136|G/-|frameshift_variant;TUBA3D|p.G366Efs*13|1|0.17|ENSG00000075886|chr2:131482588-131482588|G/-|frameshift_variant;TUBA3D|p.V328Pfs*54|1|0.45|ENSG00000075886|chr2:131480665-131480666|-/CCCAAAGA|frameshift_variant;TUBA3E|p.Q176Rfs*14|1|0.58|ENSG00000152086|chr2:130194316-130194316|G/-|frameshift_variant	68.78682469695295	0.1118430353446351	5				NaN	NaN	0	NaN	140	2429	2570
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2572	12.984	NaN	2277	30	0	411.27	0.106			+	31881	QQAAKAGVKK	10	51	514.8141270380745	1027.613701142949	2	514.814208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QQAAKAGVKK_	REV__ENSG00000196642|ENST00000311502|RABL6;REV__ENST00000432853.1_1_2:132592224-132593771:-|nuORF;REV__nc|ENSG00000196642|Q3YEC7-2|RABL6;REV__RABL6|p.K613Sfs*9|1|0.17|ENSG00000196642|chr9:136839766-136839766|C/-|frameshift_variant	49.44154591367651	0.46214596422418036	5				NaN	NaN	0	NaN	141	2429	2570
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2573	12.986	NaN	723.77	30	0	127.35	0.035			+	29546	PEMVVKTVV	9	23	501.2908020019531	NaN	0	501.2908020019531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PEMVVKTVV_	REV__ENST00000462744.5_1_1:59762566-59797652:+|nuORF	29.170058357718403	0.3302935627494407	5				NaN	NaN	0	NaN	142	2429	2570
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2578	13.001	NaN	1903.3	30	0	238.1	0.143	+			1003	AEKKTKQTL	9	48	523.8142804041001	1045.6140078750002	2	523.8150634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEKKTKQTL_	ENSG00000165525|ENST00000298310|NEMF;ENST00000556925.5_1_14:50285084-50295410:-|nuORF;ENST00000557380.5_1_14:50292586-50301128:-|nuORF;nc|ENSG00000165525|O60524-3|NEMF;nc|ENSG00000165525|O60524-4|NEMF;nc|ENSG00000165525|O60524-5|NEMF;NEMF|p.K641Rfs*9|1|0.15|ENSG00000165525|chr14:49802721-49802721|T/-|frameshift_variant;NEMF|p.M879*|1|0.12|ENSG00000165525|chr14:49789558-49789558|T/-|frameshift_variant;NEMF|p.M879Nfs*10|1|0.13|ENSG00000165525|chr14:49789557-49789558|-/T|frameshift_variant	93.1432384553994	0.056003526918089595	5				NaN	NaN	0	NaN	144	2432	2577
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2585	13.021	NaN	4087.2	30	0	930.89	0.144	+			25917	LSGPVPAPVPL	11	44	349.5449379897569	NaN	0	349.87969970703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSGPVPAPVPL_	ENST00000174618.4_1_17:2289655-2289982:-|nuORF	29.14955571784316	0.43550879202308607	5				NaN	NaN	0	NaN	148	2435	2584
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2596	13.06	NaN	1324.5	30	0	791.31	0.214			+	33805	RQPAALGPAGL	11	32	525.8049243737233	1049.5952958142466	2	525.8054809570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RQPAALGPAGL_	REV__ENSG00000205517|ENST00000380456|RGL3;REV__ENST00000453604.6_1_19:11513241-11517469:-|nuORF;REV__ENST00000566153.5_1_19:11513127-11517469:-|nuORF;REV__nc|ENSG00000205517|Q3MIN7-2|RGL3;REV__RGL3|p.D445Ifs*30|1|0.28|ENSG00000205517|chr19:11402244-11402244|C/-|frameshift_variant	14.137123925751023	0.8042936413770803	5				NaN	NaN	0	NaN	153	2441	2595
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2597	13.063	NaN	3602.2	30	0	658.61	0.106	+			40431	STVKENMKK	9	61	532.7918566601061	1063.569160387012	2	532.7922973632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STVKENMKK_	ENST00000590996.5_2_17:41329998-41338351:+|nuORF	98.58198989935565	0.04066992115528678	5				NaN	NaN	0	NaN	154	2441	2595
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2598	13.065	NaN	3360.1	30	0	824	0.106	+			45073	TVHPDPRTP	9	47	510.2671397587404	1018.5197265842809	2	510.2666320800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVHPDPRTP_	COL15A1|p.A345Lfs*13|1|0.27|ENSG00000204291|chr9:99000916-99000916|G/-|frameshift_variant;COL15A1|p.E1069Rfs*84|1|0.36|ENSG00000204291|chr9:99056264-99056264|A/-|frameshift_variant;COL15A1|p.G1040Efs*113|1|0.1|ENSG00000204291|chr9:99055293-99055293|A/-|frameshift_variant;COL15A1|p.K708Rfs*44|1|0.31|ENSG00000204291|chr9:99035053-99035053|A/-|frameshift_variant;COL15A1|p.L1176Ifs*39|1|0.32|ENSG00000204291|chr9:99062087-99062088|-/A|frameshift_variant;COL15A1|p.P575Lfs*23|1|0.03|ENSG00000204291|chr9:99022112-99022112|C/-|frameshift_variant;ENSG00000204291|ENST00000375001|COL15A1	58.78195531508484	0.22376836668196862	5				NaN	NaN	0	NaN	155	2441	2595
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2599	13.067	NaN	4480.2	30	0	1295.2	0.036	+			40432	STVKENMKK	9	42	355.53065299222595	1063.570129576878	3	355.8648681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STVKENMKK_	ENST00000590996.5_2_17:41329998-41338351:+|nuORF	42.396135135203025	0.392153681582562	5				NaN	NaN	0	NaN	156	2441	2595
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2608	13.089	NaN	1530.7	30	0	350.21	0.142	+			19476	KASSSLPKK	9	49	473.28992575326737	944.5652985733348	2	473.2899169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KASSSLPKK_	ENSG00000104979|ENST00000588234|C19orf53;ENST00000588858.5_1_19:13886394-13889009:+|nuORF	43.650786325866115	0.37743712540499297	5				NaN	NaN	0	NaN	162	2444	2607
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2614	13.108	NaN	647.69	30	0	119.71	0.214	+			9517	EKWSISKH	8	32	507.7715148925781	NaN	0	507.7715148925781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EKWSISKH_	ENSG00000083067|ENST00000677713|TRPM3;nc|ENSG00000083067|Q9HCF6-10|TRPM3;nc|ENSG00000083067|Q9HCF6-11|TRPM3;nc|ENSG00000083067|Q9HCF6-2|TRPM3;nc|ENSG00000083067|Q9HCF6-4|TRPM3;nc|ENSG00000083067|Q9HCF6-5|TRPM3;nc|ENSG00000083067|Q9HCF6-6|TRPM3;nc|ENSG00000083067|Q9HCF6-7|TRPM3;nc|ENSG00000083067|Q9HCF6-8|TRPM3;nc|ENSG00000083067|Q9HCF6|TRPM3;TRPM3|p.S1466Ffs*8|1|0.04|ENSG00000083067|chr9:70536682-70536683|-/CGTTCCAAAA|frameshift_variant	30.503639358989545	1.7418937515398478	5				NaN	NaN	0	NaN	165	2447	2613
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2615	13.112	NaN	304.57	30	0	37.221	0.035			+	31085	QFIVIWAY	8	25	520.2861328125	NaN	0	520.2861328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QFIVIWAY_	REV__ENSG00000100346|ENST00000402142|CACNA1I;REV__nc|ENSG00000100346|Q9P0X4-2|CACNA1I;REV__nc|ENSG00000100346|Q9P0X4-3|CACNA1I;REV__nc|ENSG00000100346|Q9P0X4-4|CACNA1I	23.036711822280957	1.7418937515398478	5				NaN	NaN	0	NaN	166	2447	2613
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2636	13.193	NaN	3312.4	30	0	887.35	0.147	+			48280	VTDPETHKSTK	11	43	414.88251876860073	1241.6257269060022	3	414.8827209472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTDPETHKSTK_	ENSG00000089327|ENST00000392219|FXYD5;ENST00000591716.6_1_19:35651643-35657154:+|nuORF	45.02220120713402	0.4892240028381124	5				NaN	NaN	0	NaN	172	2462	2635
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2641	13.21	NaN	1161.9	30	0	197.44	0.141			+	43908	TNPKQGKQ	8	36	450.7486929342994	899.4828329353988	2	450.748291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TNPKQGKQ_	REV__ENST00000426911.2_1_X:136058956-136065632:-|nuORF	55.50420428727701	0.5462892107279674	5				NaN	NaN	0	NaN	174	2465	2640
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2646	13.227	NaN	1494.1	30	0	204.91	0.142	+			99	AADKRSKAL	9	42	480.28595908039006	958.5573652275801	2	480.2861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AADKRSKAL_	ENSG00000156411|ENST00000286953|ATP5MJ;nc|ENSG00000156411|P56378-2|ATP5MJ	26.69291269510374	0.5537881896960711	5				NaN	NaN	0	NaN	176	2468	2645
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2653	13.247	NaN	718.32	30	0	146.3	0.214	+			41957	SVVWAVTKD	9	36	502.7723388671875	NaN	0	502.7723388671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVVWAVTKD_	ENSG00000205356|ENST00000447648|TECPR1;nc|ENSG00000205356|Q7Z6L1-2|TECPR1;nc|ENSG00000205356|Q7Z6L1-3|TECPR1;nc|ENSG00000205356|Q7Z6L1-4|TECPR1;TECPR1|p.I932Sfs*105|1|0.13|ENSG00000205356|chr7:98223125-98223125|G/-|frameshift_variant	56.43379154798735	0.16452882468284893	5				NaN	NaN	0	NaN	180	2471	2652
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2654	13.251	NaN	935.07	30	0	238.72	0.034			+	35237	SALGAKAVAR	10	33	472.287931927176	NaN	0	472.2878723144531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SALGAKAVAR_	REV__ENSG00000077420|ENST00000376236|APBB1IP	26.69291269510374	0.4125295221340092	5				NaN	NaN	0	NaN	181	2471	2652
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2691	13.411	NaN	1374.6	30	0	179.88	0.141	+			43281	TFGKKKGP	8	44	431.76102802580107	NaN	0	431.7610778808594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TFGKKKGP_	ENSG00000149806|ENST00000529639|FAU;FAU|p.A131T|1|0.24|ENSG00000149806|chr11:65120692-65120692|C/T|missense_variant	38.80614096846853	1.7418937515398478	5				NaN	NaN	0	NaN	188	2501	2690
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2697	13.429	NaN	1164.8	30	0	283.48	0.214				-1	KFQGRMRH	8	22	538.2819056307619	1074.5492583283237	2	538.2832641601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_KFQGRM(Oxidation (M))RH_	GOLGA1|p.E108Gfs*21|1|0.29|ENSG00000136935|chr9:124928264-124928264|T/-|frameshift_variant	33.51558372728122	0.7005509609380386	5				NaN	NaN	0	NaN	191	2504	2696
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2698	13.433	NaN	699.36	30	0	61.41	0.036	+			48943	VVEKPQPKK	9	35	526.827880859375	NaN	0	526.827880859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVEKPQPKK_	ENSG00000197622|ENST00000357235|CDC42SE1	49.44154591367651	0.21054156626303966	5				NaN	NaN	0	NaN	192	2504	2696
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2709	13.466	NaN	1720.1	30	0	448.83	0.214	+			22265	KTATAVAHCK	10	49	515.2798088064427	1028.5450646796853	2	515.28076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTATAVAHCK_	chr19:39435705-39435848|468|276.17|0.0|24.72|-|0|RPS16,RPS16|1;ENSG00000105193|ENST00000251453|RPS16;ENST00000601390.1_1_19:39926180-39926535:-|nuORF	63.69406221917213	0.3322431690470481	5				NaN	NaN	0	NaN	197	2510	2708
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2710	13.469	NaN	663.39	30	0	100.46	0.035			+	19688	KDQERKKN	8	37	523.2930297851562	NaN	0	523.2930297851562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KDQERKKN_	REV__tr|U7SNB2|U7SNB2_FUSNUMobA/VirD2-likenucleasedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01848PE=4SV=1	44.116797842482775	1.7418937515398478	5				NaN	NaN	0	NaN	198	2510	2708
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2720	13.492	NaN	10825	30	0	6358.7	0.147	+			41174	SVKTYQEVAQK	11	53	427.56558866567275	1279.6749365972182	3	427.5657043457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVKTYQEVAQK_	ENSG00000093072|ENST00000399837|ADA2;nc|ENSG00000093072|Q9NZK5-2|ADA2	39.873155843976775	0.5596786644756743	5				NaN	NaN	0	NaN	205	2513	2719
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2727	13.512	NaN	1364.2	30	0	251.44	0.214	+			28498	NGYIRIALY	9	34	361.5364462263194	NaN	0	361.53656005859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NGYIRIALY_	nc|ENSG00000266200|P54317|PNLIPRP2	18.324413293986947	0.3749620627292244	5				NaN	NaN	0	NaN	209	2516	2726
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2728	13.515	NaN	3017.1	30	0	1187.6	0.032	+			13294	GKAFGSGSN	9	26	412.69854751595466	NaN	0	412.6988525390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GKAFGSGSN_	ENSG00000251247|ENST00000420450|ZNF345;ENSG00000251247|ENST00000420450|ZNF345;ZNF345|p.L217F|1|0.33|ENSG00000251247|chr19:36877479-36877479|C/T|missense_variant	16.473147378115264	0.38122769658151995	5				NaN	NaN	0	NaN	210	2516	2726
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2733	13.53	NaN	13805	30	0	4384.7	0.214	+			14342	GTAAKSITK	9	68	438.7612588275124	875.5079647218248	2	438.76116943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTAAKSITK_	ENSG00000133574|ENST00000255945|GIMAP4	150.36159442982594	0.006784847064083231	5				NaN	NaN	0	NaN	212	2519	2732
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2734	13.533	NaN	1304.1	30	0	185.68	0.035			+	48578	VTQKTNSLI	9	46	502.2937184560003	1002.5728839788006	2	502.29425048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTQKTNSLI_	REV__tr|U7T586|U7T586_FUSNUDNApolymeraseIIIsubunitgamma/tauOS=FusobacteriumnucleatumCTI-5OX=1316586GN=dnaXPE=3SV=1	58.2462437865262	0.22823408064396822	5				NaN	NaN	0	NaN	213	2519	2732
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2750	13.574	NaN	9001.2	30	0	3865.6	0.214	+			3911	ATARPRPVK	9	61	498.309293213418	994.604033493636	2	498.3094177246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATARPRPVK_	ENSG00000170892|ENST00000396388|TSEN34	65.46538089061403	0.16805504838372562	5				NaN	NaN	0	NaN	223	2525	2749
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2751	13.577	NaN	1468.6	30	0	386.36	0.034			+	47469	VQAGTLTLK	9	39	465.78486114469274	NaN	0	465.78399658203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VQAGTLTLK_	REV__ENSG00000080603|ENST00000262518|SRCAP;REV__nc|ENSG00000080603|Q6ZRS2-2|SRCAP;REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP;REV__SRCAP|p.K2179Rfs*128|1|0.2|ENSG00000080603|chr16:30733930-30733930|A/-|frameshift_variant;REV__SRCAP|p.L2975*|1|0.31|ENSG00000080603|chr16:30738960-30738960|C/-|frameshift_variant;REV__SRCAP|p.P1878Hfs*89|2|0.36|ENSG00000080603|chr16:30725050-30725050|C/-|frameshift_variant;REV__SRCAP|p.P1879Tfs*21|1|0.46|ENSG00000080603|chr16:30725049-30725050|-/C|frameshift_variant;REV__SRCAP|p.R1871Gfs*96|1|0.19|ENSG00000080603|chr16:30725031-30725031|C/-|frameshift_variant;REV__SRCAP|p.R2548Efs*3|1|0.36|ENSG00000080603|chr16:30737668-30737669|-/C|frameshift_variant;REV__SRCAP|p.S1859Afs*108|1|0.25|ENSG00000080603|chr16:30724993-30724993|C/-|frameshift_variant	44.377184641726394	0.24544280798894275	5				NaN	NaN	0	NaN	224	2525	2749
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2758	13.594	NaN	4590.8	30	0	1122.4	0.214	+			22854	KVKDGAKP	8	45	421.7583121571355	841.502071381071	2	421.7585144042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVKDGAKP_	ENSG00000133858|ENST00000378743|ZFC3H1;nc|ENSG00000133858|O60293-2|ZFC3H1;nc|ENSG00000133858|O60293-4|ZFC3H1;ZFC3H1|p.E1034Dfs*26|1|0.04|ENSG00000133858|chr12:71632230-71632231|-/AATAAAAATACTG|frameshift_variant;ZFC3H1|p.E390Nfs*4|1|0.39|ENSG00000133858|chr12:71644989-71644989|T/-|frameshift_variant;ZFC3H1|p.K385Nfs*9|5|0.36|ENSG00000133858|chr12:71645001-71645001|T/-|frameshift_variant;ZFC3H1|p.L1048*|1|0.18|ENSG00000133858|chr12:71632189-71632189|A/-|frameshift_variant;ZFC3H1|p.L1693Ffs*10|1|0.1|ENSG00000133858|chr12:71619380-71619381|-/A|frameshift_variant;ZFC3H1|p.V423Sfs*2|1|0.32|ENSG00000133858|chr12:71644889-71644890|-/T|frameshift_variant	71.29570347882199	0.39610197767395533	5				NaN	NaN	0	NaN	228	2528	2757
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2759	13.597	NaN	946.48	30	0	136.79	0.04	+			32940	REAPSPQV	8	36	442.23313529568594	NaN	0	441.901123046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_REAPSPQV_	ENST00000396061.5_1_15:59949592-59949661:-|nuORF	40.77816245573522	1.7418937515398478	5				NaN	NaN	0	NaN	229	2528	2757
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2763	13.611	NaN	7926.8	30	0	1897.4	0.142	+			38431	SSAKPVIKK	9	58	479.3085486951404	956.6025444570809	2	479.3083190917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSAKPVIKK_	ENSG00000112701|ENST00000447266|SENP6;nc|ENSG00000112701|Q9GZR1-2|SENP6;SENP6|p.G1004Efs*11|4|0.34|ENSG00000112701|chr6:75713700-75713700|A/-|frameshift_variant;SENP6|p.I864*|1|0.21|ENSG00000112701|chr6:75702940-75702940|A/-|frameshift_variant	120.8684288430529	0.02067403653475984	5				NaN	NaN	0	NaN	230	2531	2762
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2772	13.644	NaN	1003.3	30	0	132.25	0.142			+	36299	SERKTTSK	8	41	468.7594788532118	935.5044047732237	2	468.7589416503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SERKTTSK_	REV__ENSG00000166025|ENST00000433060|AMOTL1;REV__nc|ENSG00000166025|Q8IY63-2|AMOTL1	54.776311868738084	0.5534952410049249	5				NaN	NaN	0	NaN	233	2537	2771
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2778	13.662	NaN	2529.5	30	0	351.95	0.143			+	10855	FATILTYF	8	46	488.26434930052017	974.5141456678404	2	488.26416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FATILTYF_	REV__ENSG00000134259|ENST00000369512|NGF;REV__NGF|p.F113Sfs*45|1|0.22|ENSG00000134259|chr1:115286460-115286460|G/-|frameshift_variant	35.200714571348534	0.6875396545722289	5				NaN	NaN	0	NaN	236	2540	2777
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2782	13.678	NaN	4756.5	30	0	493.25	0.143	+			18786	ITQRGNVAK	9	60	493.7907391952474	985.5669254572948	2	493.7902526855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ITQRGNVAK_	ENSG00000120742|ENST00000239944|SERP1;ENSG00000151778|ENST00000379179|SERP2	81.52500206392136	0.09095445986635249	5				NaN	NaN	0	NaN	237	2543	2781
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2790	13.699	NaN	2089.7	30	0	469.74	0.145	+			20164	KEKRQEQIA	9	45	565.3202042518174	1128.6258555704346	2	565.820556640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEKRQEQIA_	ENSG00000137154|ENST00000380394|RPS6;ENST00000393214.2_1_X:73595962-73596157:-|nuORF;ENST00000498815.1_1_9:19376293-19376674:-|nuORF	68.84614121027924	0.14577793175421136	5				NaN	NaN	0	NaN	242	2546	2789
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2797	13.717	NaN	2595.9	30	0	290.02	0.214	+			39267	STAQKAIGK	9	58	452.26684961610704	902.5191462990141	2	452.2666320800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STAQKAIGK_	DPYSL3|p.A516Qfs*15|1|0.31|ENSG00000113657|chr5:147395638-147395638|G/-|frameshift_variant;ENSG00000113657|ENST00000343218|DPYSL3;nc|ENSG00000113657|Q14195|DPYSL3	78.26377905018397	0.10505600812668463	5				NaN	NaN	0	NaN	246	2549	2796
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2798	13.721	NaN	3188.1	30	0	690	0.106			+	890	AEHKIYGKLA	10	27	377.21608754197007	1128.6264332261103	3	377.21630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEHKIYGKLA_	REV__ENSG00000137804|ENST00000559596|NUSAP1;REV__ENST00000558123.5_1_15:41625112-41672381:+|nuORF;REV__nc|ENSG00000137804|Q9BXS6-2|NUSAP1;REV__nc|ENSG00000137804|Q9BXS6-3|NUSAP1;REV__nc|ENSG00000137804|Q9BXS6-4|NUSAP1;REV__nc|ENSG00000137804|Q9BXS6-5|NUSAP1;REV__nc|ENSG00000137804|Q9BXS6-6|NUSAP1	28.081489160057373	0.6505064946289502	5				NaN	NaN	0	NaN	247	2549	2796
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2799	13.723	NaN	601.53	30	0	211.2	0.106			+	44100	TPVFMGAEK	9	23	490.2512512207031	NaN	0	490.2512512207031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TPVFMGAEK_	REV__ENSG00000102230|ENST00000379144|PCYT1B;REV__nc|ENSG00000102230|Q9Y5K3-2|PCYT1B;REV__nc|ENSG00000102230|Q9Y5K3-3|PCYT1B;REV__nc|ENSG00000102230|Q9Y5K3-4|PCYT1B	26.69291269510374	0.34280015626154364	5				NaN	NaN	0	NaN	248	2549	2796
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2800	13.725	NaN	1909.3	30	0	552.69	0.036	+			48369	VTHEGSTVEK	10	47	543.7752818437001	1085.5360107542	2	543.775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTHEGSTVEK_	nc|ENSG00000211675|P0CG04|IGLC1;nc|ENSG00000211677|P0DOY2|IGLC2;nc|ENSG00000211679|P0DOY3|IGLC3;nc|ENSG00000211685|A0M8Q6|IGLC7;nc|ENSG00000222037|P0CF74|IGLC6;nc|ENSG00000254709|B9A064|IGLL5	60.1669710687717	0.3643216362415131	5				NaN	NaN	0	NaN	249	2549	2796
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2823	13.807	NaN	1790.9	30	0	414.96	0.144				-1	IMSRLKDPN	9	33	545.2899728992688	1088.5653928653376	2	545.29052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_IM(Oxidation (M))SRLKDPN_	ENSG00000162733|ENST00000367921|DDR2;ENSG00000204580|ENST00000376568|DDR1;nc|ENSG00000204580|Q08345-2|DDR1;nc|ENSG00000204580|Q08345-5|DDR1;nc|ENSG00000204580|Q08345-6|DDR1	37.15910966729921	0.4535818937225704	5				NaN	NaN	0	NaN	257	2564	2822
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2836	13.846	NaN	3593.2	30	0	517.2	0.143				-1	SHGAGLVRTT	10	56	520.7779688603363	1039.5413847874725	2	520.7793579101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SHGAGLVRTT_	ENSG00000153551|ENST00000334983|CMTM7;nc|ENSG00000153551|Q96FZ5-2|CMTM7	74.25504064058377	0.24255678544297835	5				NaN	NaN	0	NaN	264	2570	2835
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2844	13.869	NaN	10242	30	0	1402.5	0.215			+	20629	KGGAHRSPPK	10	81	517.7962881114776	1033.578023289755	2	517.7966918945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KGGAHRSPPK_	REV__ENSG00000157637|ENST00000374759|SLC38A10;REV__nc|ENSG00000157637|Q9HBR0-2|SLC38A10;REV__nc|ENSG00000157637|Q9HBR0-3|SLC38A10	65.46538089061403	0.31613324008013116	5				NaN	NaN	0	NaN	269	2573	2843
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2845	13.872	NaN	899.75	30	0	182.3	0.03	+			26707	LVINCAGFGK	10	35	341.18743162320527	NaN	0	341.1874084472656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LVINCAGFGK_	tr|U7T5C0|U7T5C0_FUSNUKetoacylreductaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00515PE=3SV=1	34.172542307311794	0.38797011891751465	5				NaN	NaN	0	NaN	270	2573	2843
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2852	13.891	NaN	1015.5	30	0	214.08	0.143	+			49265	VVPPPQRPD	9	42	502.7819978278781	NaN	0	502.7822265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVPPPQRPD_	ENST00000526559.5_1_11:64693020-64693122:+|nuORF	45.9519527083369	0.2345902329052062	5				NaN	NaN	0	NaN	274	2576	2851
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2860	13.911	NaN	1010	30	0	337.68	0.143			+	30721	QDIFVKLE	8	43	496.27471347376905	990.5348740143381	2	496.2753601074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QDIFVKLE_	REV__ENSG00000198176|ENST00000375370|TFDP1;REV__ENST00000465174.1_1_13:114240152-114286060:+|nuORF;REV__TFDP1|p.A10T|1|0.04|ENSG00000198176|chr13:113611011-113611011|G/A|missense_variant	68.78682469695295	0.41700713582915416	5				NaN	NaN	0	NaN	279	2579	2859
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2870	13.945	NaN	3591.8	30	0	752.69	0.214	+			6410	AVVKPGNTK	9	55	457.2772128714296	912.5398728096592	2	457.27728271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVVKPGNTK_	ENSG00000178974|ENST00000313833|FBXO34;FBXO34|p.I120Lfs*13|3|0.36|ENSG00000178974|chr14:55350743-55350743|A/-|frameshift_variant;FBXO34|p.L485Cfs*13|1|0.39|ENSG00000178974|chr14:55351837-55351837|T/-|frameshift_variant	110.11987700582712	0.028875675806141952	5				NaN	NaN	0	NaN	283	2585	2869
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2871	13.949	NaN	1098.4	30	0	241.82	0.034	+			17209	HVGDPSVKK	9	34	483.7723742785703	NaN	0	483.7721862792969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HVGDPSVKK_	ENSG00000057294|ENST00000340811|PKP2;nc|ENSG00000057294|Q99959|PKP2	51.52775601994872	0.19616436856719055	5				NaN	NaN	0	NaN	284	2585	2869
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2882	13.975	NaN	3342.6	30	0	494.37	0.214	+			19811	KEDEKKQEL	9	64	573.8047523307741	1145.5949517283482	2	573.8050537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEDEKKQEL_	ENSG00000138640|ENST00000264344|FAM13A;ENST00000508360.5_1_4:89653076-89671014:-|nuORF;ENST00000511573.5_1_4:89649686-89680064:-|nuORF;nc|ENSG00000138640|O94988-1|FAM13A;nc|ENSG00000138640|O94988-3|FAM13A;nc|ENSG00000138640|O94988-5|FAM13A;nc|ENSG00000138640|O94988-6|FAM13A	143.37361013837676	0.008897369944672323	5				NaN	NaN	0	NaN	292	2588	2881
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2883	13.978	NaN	6039	30	0	2006.5	0.106	+			25277	LNRNFNQQL	9	57	382.87210070023934	1145.594472700918	3	382.8719482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LNRNFNQQL_	nc|ENSG00000132196|P56937-3|HSD17B7	45.9519527083369	0.35044536499095585	5				NaN	NaN	0	NaN	293	2588	2881
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2884	13.98	NaN	772.41	30	0	537.65	0.106	+			47591	VRQGLGPA	8	12	399.23529052734375	NaN	0	399.23529052734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VRQGLGPA_	ENSG00000089820|ENST00000350060|ARHGAP4;ENST00000404127.6_1_X:153173185-153186849:-|nuORF;ENST00000470209.5_1_X:153173185-153178999:-|nuORF;nc|ENSG00000089820|P98171-2|ARHGAP4	4.6817480819748125	1.7418937515398478	5				NaN	NaN	0	NaN	294	2588	2881
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2885	13.982	NaN	1373.8	30	0	202.22	0.036			+	43516	TGSRSTVPVR	10	40	530.2998046875	NaN	0	530.2998046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TGSRSTVPVR_	REV__ENST00000420551.1_1_2:242441106-242447985:-|nuORF	24.519189625965996	0.41966695327750003	5				NaN	NaN	0	NaN	295	2588	2881
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2897	14.007	NaN	8213.5	30	0	1247.7	0.214	+			21053	KKKSTNNLK	9	64	530.8278004632673	1059.6410479933345	2	530.8284301757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KKKSTNNLK_	nc|ENSG00000261011|Q8TF27|AGAP11	54.722347961057174	0.257609425301511	5				NaN	NaN	0	NaN	304	2591	2896
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2898	14.011	NaN	2154.6	30	0	490.44	0.106			+	50998	YISFNDLNK	9	58	557.2815463773908	NaN	0	557.2814331054688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YISFNDLNK_	REV__tr|U7SN89|U7SN89_FUSNULipoproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01706PE=4SV=1	59.93077597824379	0.14961415694175798	5				NaN	NaN	0	NaN	305	2591	2896
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2899	14.013	NaN	7781.2	30	0	1408.4	0.106	+			5406	ATYGKPVHH	9	61	505.2647025820371	1008.5148522308742	2	505.26483154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATYGKPVHH_	ENSG00000174748|ENST00000307839|RPL15;ENST00000436146.1_1_3:23959450-23960989:+|nuORF;ENST00000490223.1_1_3:23959920-23960989:+|nuORF;nc|ENSG00000174748|P61313-2|RPL15	90.36981228632155	0.0638227155548745	5				NaN	NaN	0	NaN	306	2591	2896
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2900	14.015	NaN	4738.9	30	0	521.09	0.106	+			39070	SSSRAVVVKK	10	56	354.22042816274273	NaN	0	354.2207336425781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSSRAVVVKK_	CON__H-INV:HIT000292931;CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	55.08391021199286	0.27346126051334796	5				NaN	NaN	0	NaN	307	2591	2896
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2901	14.016	NaN	2442.3	30	0	389.18	0.106			+	29668	PGPPRGAW	8	39	419.2220707171574	836.4295885011148	2	419.22216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PGPPRGAW_	REV__ENSG00000171119|ENST00000303212|NRTN	21.70233525837049	0.7917639344264583	5				NaN	NaN	0	NaN	308	2591	2896
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2902	14.018	NaN	989.98	30	0	117.56	0.037	+			10476	EVPWGQGVEI	10	36	371.85604565501046	NaN	0	371.85595703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EVPWGQGVEI_	GRIA2|p.A335E|1|0.39|ENSG00000120251|chr4:157332940-157332940|C/A|missense_variant	29.170058357718403	0.40439580130713204	5				NaN	NaN	0	NaN	309	2591	2896
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2912	14.04	NaN	3358.4	30	0	622.92	0.214	+			27279	MFVPVLLTQ	9	39	349.86865234375	NaN	0	349.86865234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MFVPVLLTQ_	ENST00000410023.5_1_2:102781281-102781338:+|nuORF	34.172542307311794	0.30503706118289736	5				NaN	NaN	0	NaN	316	2594	2911
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2913	14.044	NaN	829.31	30	0	88.853	0.106	+			43285	TFGKKKGPNA	10	35	524.30126953125	NaN	0	524.30126953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TFGKKKGPNA_	ENSG00000149806|ENST00000529639|FAU	53.08895987439943	0.2860736266326207	5				NaN	NaN	0	NaN	317	2594	2911
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2914	14.046	NaN	1419.4	30	0	180.91	0.036	+			32014	QRLQYIKQ	8	46	538.8147188338409	1075.6148847344816	2	538.81591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QRLQYIKQ_	SAMHD1|p.R145Q|1|0.24|ENSG00000101347|chr20:36935104-36935104|C/T|missense_variant	60.97194046774394	0.49215940876911696	5				NaN	NaN	0	NaN	318	2594	2911
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2923	14.066	NaN	4185.7	30	0	642.48	0.144	+			39383	STDKQTCLK	9	63	540.771744343132	1079.528935753064	2	540.7728881835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_STDKQTC(Carbamidomethyl (C))LK_	ENSG00000198788|ENST00000675028|MUC2;nc|ENSG00000198788|Q02817|MUC2	101.45984612302182	0.0377122763612125	5				NaN	NaN	0	NaN	324	2597	2922
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2930	14.084	NaN	1637.7	30	0	478.29	0.143			+	36902	SIHPRGVTK	9	46	497.7931667194329	993.5717805056659	2	497.7929992675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIHPRGVTK_	REV__TGFB2|p.N274Tfs*10|2|0.29|ENSG00000092969|chr1:218436029-218436029|A/-|frameshift_variant	64.20726635412375	0.17854274437659667	5				NaN	NaN	0	NaN	328	2600	2929
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2946	14.127	NaN	4037.1	30	0	1151.2	0.141	+			39739	STISSNASK	9	53	447.7300637880138	893.4455746428276	2	447.7294616699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STISSNASK_	ENSG00000101166|ENST00000355937|PRELID3B;nc|ENSG00000101166|Q9Y3B1-2|PRELID3B	90.60085204095205	0.06317133949006545	5				NaN	NaN	0	NaN	338	2606	2945
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2956	14.161	NaN	9645.4	30	0	1411.4	0.144	+			6174	AVQKKTFTK	9	61	525.8189929853867	1049.6234330375732	2	525.8202514648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVQKKTFTK_	ENSG00000115306|ENST00000356805|SPTBN1;ENSG00000160460|ENST00000598249|SPTBN4;ENSG00000173898|ENST00000533211|SPTBN2;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1;nc|ENSG00000160460|Q9H254-2|SPTBN4;nc|ENSG00000160460|Q9H254-4|SPTBN4;nc|ENSG00000173898|O15020-2|SPTBN2;SPTBN1|p.K503Rfs*24|1|0.06|ENSG00000115306|chr2:54626095-54626095|G/-|frameshift_variant;SPTBN2|p.P924Qfs*35|1|0.39|ENSG00000173898|chr11:66701629-66701629|G/-|frameshift_variant	120.27252224102466	0.02103478360410217	5				NaN	NaN	0	NaN	342	2612	2955
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2961	14.178	NaN	11342	30	0	2103	0.144	+			6175	AVQKKTFTK	9	58	350.8814869080094	1049.6226313242282	3	350.8815002441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVQKKTFTK_	ENSG00000115306|ENST00000356805|SPTBN1;ENSG00000160460|ENST00000598249|SPTBN4;ENSG00000173898|ENST00000533211|SPTBN2;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1;nc|ENSG00000160460|Q9H254-2|SPTBN4;nc|ENSG00000160460|Q9H254-4|SPTBN4;nc|ENSG00000173898|O15020-2|SPTBN2;SPTBN1|p.K503Rfs*24|1|0.06|ENSG00000115306|chr2:54626095-54626095|G/-|frameshift_variant;SPTBN2|p.P924Qfs*35|1|0.39|ENSG00000173898|chr11:66701629-66701629|G/-|frameshift_variant	93.1432384553994	0.056003526918089595	5				NaN	NaN	0	NaN	344	2615	2960
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2967	14.196	NaN	940.32	30	0	156.49	0.214	+			50888	YFQSGRSR	8	43	500.7504946068322	999.4864362804644	2	500.7503356933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YFQSGRSR_	CDH7|p.R47C|1|0.07|ENSG00000081138|chr18:65762981-65762981|C/T|missense_variant;ENSG00000081138|ENST00000397968|CDH7	51.33545320467046	0.5859736979383976	5				NaN	NaN	0	NaN	347	2618	2966
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2968	14.2	NaN	3717.9	30	0	2225.1	0.035	+			19453	KARKQKGAE	9	38	508.30420246326986	1014.5938519933397	2	508.3044738769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KARKQKGAE_	ENSG00000111641|ENST00000322166|NOP2;ENST00000542015.1_1_12:6669877-6677084:-|nuORF;ENST00000546053.1_1_12:6676973-6677084:-|nuORF;nc|ENSG00000111641|P46087-2|NOP2;nc|ENSG00000111641|P46087-3|NOP2;nc|ENSG00000111641|P46087-4|NOP2	38.80614096846853	0.43426287593479557	5				NaN	NaN	0	NaN	348	2618	2966
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2978	14.232	NaN	973.54	30	0	247.9	0.142	+			21941	KSADPLKSK	9	37	487.2876853372204	972.5608177412408	2	487.2878723144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSADPLKSK_	CAPN7|p.K253Nfs*21|1|0.35|ENSG00000131375|chr3:15227870-15227870|A/-|frameshift_variant;ENSG00000131375|ENST00000253693|CAPN7;ENST00000457023.1_1_3:15247773-15262489:+|nuORF	49.536043120802724	0.308405419312776	5				NaN	NaN	0	NaN	352	2624	2977
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2983	14.248	NaN	3297.8	30	0	322.11	0.143	+			32784	RASHPIVQK	9	59	518.3068028544665	1034.5990527757328	2	518.306396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RASHPIVQK_	ENSG00000112159|ENST00000369393|MDN1;MDN1|p.E2692*|2|0.32|ENSG00000112159|chr6:89706133-89706134|-/A|frameshift_variant;MDN1|p.F2691Lfs*7|2|0.37|ENSG00000112159|chr6:89706134-89706134|A/-|frameshift_variant;MDN1|p.K2642Nfs*17|2|0.29|ENSG00000112159|chr6:89707449-89707449|T/-|frameshift_variant;MDN1|p.L4077Cfs*15|1|0.16|ENSG00000112159|chr6:89680625-89680625|G/-|frameshift_variant;MDN1|p.L5278Ffs*6|1|0.18|ENSG00000112159|chr6:89652273-89652274|-/A|frameshift_variant	85.86182877749512	0.07653218437724067	5				NaN	NaN	0	NaN	354	2627	2982
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2993	14.272	NaN	697.6	30	0	79.663	0.142			+	10723	FADLKEQI	8	42	482.26018011173863	962.5058072902773	2	482.260009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FADLKEQI_	REV__ENSG00000198836|ENST00000361510|OPA1;REV__ENST00000495261.1_1_3:193409823-193409913:+|nuORF;REV__nc|ENSG00000198836|O60313-11|OPA1;REV__nc|ENSG00000198836|O60313-13|OPA1;REV__nc|ENSG00000198836|O60313-2|OPA1;REV__nc|ENSG00000198836|O60313-9|OPA1;REV__nc|ENSG00000198836|O60313|OPA1	23.04248740728303	0.7814162927298575	5				NaN	NaN	0	NaN	361	2630	2992
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3004	14.3	NaN	7656.7	30	0	1357.5	0.214	+			22019	KSGPVIAKR	9	55	478.30620088642354	954.5978488396471	2	478.3060607910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSGPVIAKR_	ENSG00000109920|ENST00000263773|FNBP4;FNBP4|p.G931Efs*17|1|0.32|ENSG00000109920|chr11:47722991-47722991|T/-|frameshift_variant;FNBP4|p.K790Efs*7|1|0.34|ENSG00000109920|chr11:47724123-47724124|TT/-|frameshift_variant;FNBP4|p.P715Hfs*26|1|0.51|ENSG00000109920|chr11:47724643-47724643|G/-|frameshift_variant;FNBP4|p.W950Vfs*7|1|0.22|ENSG00000109920|chr11:47720045-47720046|-/T|frameshift_variant;nc|ENSG00000109920|Q8N3X1-2|FNBP4	159.27591364854348	0.004707062175358555	5				NaN	NaN	0	NaN	369	2633	3003
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3005	14.304	NaN	862.67	30	0	209.88	0.106			+	31453	QKSSIRIQK	9	46	544.333251953125	NaN	0	544.333251953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QKSSIRIQK_	REV__LTV1|p.T382Qfs*23|1|0.08|ENSG00000135521|chr6:143863110-143863110|A/-|frameshift_variant	47.657333605630114	0.2228375344433429	5				NaN	NaN	0	NaN	370	2633	3003
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3006	14.306	NaN	1874.6	30	0	954.35	0.106			+	-1	ASIWVLCK	8	18	326.1822204589844	NaN	0	326.1822204589844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_ASIWVLC(Carbamidomethyl (C))K_	REV__ENST00000216014.8_1_22:38878537-38878720:+|nuORF	17.364965105453717	1.7418937515398478	5				NaN	NaN	0	NaN	371	2633	3003
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3007	14.307	NaN	2222.8	30	0	386.34	0.036			+	19355	KAKRHMEAK	9	51	549.8142367309624	1097.6139205287247	2	549.8150024414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KAKRHMEAK_	REV__ARCN1|p.R160H|1|0.39|ENSG00000095139|chr11:118583840-118583840|G/A|missense_variant	58.22992032128504	0.22837015374068087	5				NaN	NaN	0	NaN	372	2633	3003
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3030	14.361	NaN	4036.3	30	0	545.47	0.143	+			23137	KVVVSPTKK	9	52	493.324330826087	984.6341087189741	2	493.3240661621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVVVSPTKK_	ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232323706-232327997:-|nuORF	123.20810148215591	0.019257656778428764	5				NaN	NaN	0	NaN	389	2639	3029
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3044	14.393	NaN	9531.7	30	0	1359	0.214			+	38905	SSPPPCQLTPG	11	76	542.2624554212623	1082.5103579093245	2	542.2634887695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSPPPCQLTPG_	REV__ENSG00000125505|ENST00000245615|MBOAT7;REV__nc|ENSG00000125505|Q96N66-2|MBOAT7;REV__nc|ENSG00000125505|Q96N66-3|MBOAT7	72.87924865735499	0.21173632944124365	5				NaN	NaN	0	NaN	400	2642	3043
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3045	14.397	NaN	5408.3	30	0	934.87	0.106	+			20043	KEKAKETAL	9	61	509.30112125402894	1016.5876895748579	2	509.3013610839844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEKAKETAL_	ENSG00000169230|ENST00000303204|PRELID1;ENST00000503853.1_1_5:176733373-176733568:+|nuORF;ENST00000567272.1_1_6:126965256-126965442:+|nuORF;nc|ENSG00000169230|Q9Y255-2|PRELID1	101.25262130126117	0.03792372629710479	5				NaN	NaN	0	NaN	401	2642	3043
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3046	14.399	NaN	2251.5	30	0	382.79	0.106	+			21567	KPEALNKKAI	10	51	556.3462411041675	1110.6779292751348	2	556.3468627929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KPEALNKKAI_	ENSG00000198793|ENST00000361445|MTOR;ENST00000490931.1_1_1:11167544-11171580:-|nuORF	62.107414245175825	0.3466735403679669	5				NaN	NaN	0	NaN	402	2642	3043
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3047	14.401	NaN	3458.2	30	0	887.48	0.106	+			12001	FVTPLKEAL	9	32	339.86949291869394	1016.5866493562819	3	339.8698425292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FVTPLKEAL_	ENSG00000148229|ENST00000374171|POLE3	27.882242232435846	0.5426732730940306	5				NaN	NaN	0	NaN	403	2642	3043
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3048	14.402	NaN	7751.9	30	0	709.52	0.106	+			44706	TTKKPPLAQK	10	69	371.23277500173003	1110.67649560539	3	371.2324523925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TTKKPPLAQK_	ENSG00000130787|ENST00000253083|HIP1R;ENST00000538236.1_1_12:123345767-123346160:+|nuORF	46.45678178249821	0.4896490706773647	5				NaN	NaN	0	NaN	404	2642	3043
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3049	14.404	NaN	982.24	30	0	316.39	0.037				-1	TAEYSMLPR	9	28	361.84418903938206	NaN	0	361.8441162109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_TAEYSM(Oxidation (M))LPR_	tr|U7SLQ0|U7SLQ0_FUSNUMultifunctionalfusionproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=rphPE=3SV=1	19.996771675451527	0.3693019437812985	5				NaN	NaN	0	NaN	405	2642	3043
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3060	14.428	NaN	3372.6	30	0	1394.8	0.214	+			3755	ATAEKCLHK	9	43	500.76607516922735	999.5175974052547	2	500.7662048339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATAEKCLHK_	ENSG00000180098|ENST00000373830|TRNAU1AP;ENST00000464880.5_1_1:28879622-28887433:+|nuORF;ENST00000480930.5_1_1:28879622-28887666:+|nuORF;ENST00000484775.1_1_1:28887181-28904036:+|nuORF;ENST00000491577.5_1_1:28879622-28887259:+|nuORF;ENST00000495995.5_1_1:28880088-28887666:+|nuORF;TRNAU1AP|p.Q222Sfs*29|1|0.24|ENSG00000180098|chr1:28571305-28571305|C/-|frameshift_variant	62.107414245175825	0.1960472003779324	5				NaN	NaN	0	NaN	413	2645	3059
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3061	14.432	NaN	4139.7	30	0	1023.3	0.035	+			12370	GDRLQGRAQ	9	30	334.1795217470284	999.5167358412853	3	334.1795654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GDRLQGRAQ_	ENST00000412055.5_2_3:9991823-9994068:-|nuORF	31.529811441608018	0.5085848003137583	5				NaN	NaN	0	NaN	414	2645	3059
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3074	14.48	NaN	1065	30	0	339.81	0.142			+	43671	TKAFSPVY	8	38	456.7432861328125	NaN	0	456.7432861328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TKAFSPVY_	REV__ENSG00000135338|ENST00000369846|LCA5	45.9519527083369	1.7418937515398478	5				NaN	NaN	0	NaN	418	2654	3073
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3080	14.499	NaN	2305.9	30	0	476.53	0.214	+			25447	LPQAQESNH	9	47	512.2467398512603	1022.4789267693205	2	512.2467651367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LPQAQESNH_	IKZF4|p.D48E|1|0.17|ENSG00000123411|chr12:56023727-56023727|C/G|missense_variant	24.20275056022122	0.577060078256802	5				NaN	NaN	0	NaN	421	2657	3079
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3081	14.503	NaN	1655.9	30	0	273.49	0.035	+			46330	VEKKKEPSV	9	47	522.308517046211	1042.602481159222	2	522.309326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VEKKKEPSV_	ENSG00000167674|ENST00000616600|HDGFL2;nc|ENSG00000167674|Q7Z4V5-2|HDGFL2;nc|ENSG00000167674|Q7Z4V5-3|HDGFL2;nc|ENSG00000167674|Q7Z4V5-4|HDGFL2	72.87924865735499	0.12833875048249987	5				NaN	NaN	0	NaN	422	2657	3079
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3088	14.52	NaN	1713.6	30	0	439.99	0.214	+			12411	GEAKPRKTL	9	40	500.30137665997955	NaN	0	500.3016662597656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEAKPRKTL_	ENSG00000099290|ENST00000282633|WASHC2A;ENSG00000172661|ENST00000623400|WASHC2C;nc|ENSG00000099290|Q641Q2-2|WASHC2A;nc|ENSG00000172661|Q9Y4E1-1|WASHC2C;nc|ENSG00000172661|Q9Y4E1-2|WASHC2C;nc|ENSG00000172661|Q9Y4E1-3|WASHC2C;nc|ENSG00000172661|Q9Y4E1-4|WASHC2C;nc|ENSG00000172661|Q9Y4E1-6|WASHC2C	45.97224482568171	0.23445038899310136	5				NaN	NaN	0	NaN	426	2660	3087
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3089	14.523	NaN	609.34	30	0	172.71	0.036	+			5269	ATVDKTVCKK	10	31	546.8086332240192	1091.6027135148383	2	546.81005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATVDKTVCKK_	ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1670Tfs*23|1|0.29|ENSG00000174231|chr17:1659487-1659487|C/-|frameshift_variant	31.634271133179894	0.6214930414500597	5				NaN	NaN	0	NaN	427	2660	3087
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3098	14.543	NaN	1534.8	30	0	204.33	0.214	+			40423	STVHGGIQK	9	37	463.7566719942951	NaN	0	463.7568054199219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STVHGGIQK_	ENSG00000091009|ENST00000265271|RBM27;RBM27|p.K816Tfs*63|2|0.2|ENSG00000091009|chr5:146267757-146267758|AA/-|frameshift_variant	54.776311868738084	0.17377682019723872	5				NaN	NaN	0	NaN	433	2663	3097
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3099	14.547	NaN	1980.2	30	0	450.21	0.034			+	45012	TVFANKAVV	9	47	474.7808210552646	NaN	0	474.7808837890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVFANKAVV_	REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-10|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-13|TTN;REV__nc|ENSG00000155657|Q8WZ42-2|TTN;REV__nc|ENSG00000155657|Q8WZ42-3|TTN;REV__nc|ENSG00000155657|Q8WZ42-4|TTN;REV__nc|ENSG00000155657|Q8WZ42-5|TTN;REV__nc|ENSG00000155657|Q8WZ42-7|TTN;REV__nc|ENSG00000155657|Q8WZ42-8|TTN;REV__nc|ENSG00000155657|Q8WZ42-9|TTN;REV__nc|ENSG00000155657|Q8WZ42|TTN;REV__TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;REV__TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;REV__TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;REV__TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;REV__TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;REV__TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant	51.33545320467046	0.19748963086191895	5				NaN	NaN	0	NaN	434	2663	3097
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3106	14.564	NaN	3456.8	30	0	771.39	0.145			+	47363	VPFANKSLLK	10	52	372.89621859490154	1115.6668263849047	3	372.896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VPFANKSLLK_	REV__ENSG00000107862|ENST00000369983|GBF1;REV__GBF1|p.D1798Tfs*11|1|0.46|ENSG00000107862|chr10:102382143-102382143|C/-|frameshift_variant;REV__GBF1|p.S1486Tfs*46|1|0.17|ENSG00000107862|chr10:102377105-102377106|-/C|frameshift_variant;REV__GBF1|p.S825Pfs*25|1|0.34|ENSG00000107862|chr10:102367124-102367124|T/-|frameshift_variant;REV__nc|ENSG00000107862|Q92538-1|GBF1;REV__nc|ENSG00000107862|Q92538-2|GBF1;REV__nc|ENSG00000107862|Q92538-3|GBF1	36.31764250033197	0.5830761606467809	5				NaN	NaN	0	NaN	438	2666	3105
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3119	14.593	NaN	5848.7	30	0	1508.9	0.214	+			49343	VVSKSGSLK	9	57	452.7769271125341	903.5393012918682	2	452.7767639160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVSKSGSLK_	ENSG00000166197|ENST00000605788|NOLC1;ENST00000477977.1_1_10:103920762-103923575:+|nuORF;nc|ENSG00000166197|Q14978-2|NOLC1;nc|ENSG00000166197|Q14978-3|NOLC1	96.0336014099291	0.047854655524928534	5				NaN	NaN	0	NaN	448	2669	3118
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3120	14.596	NaN	1416.1	30	0	256.88	0.034	+			48273	VTDNGSPPK	9	48	457.73220063871116	913.4498483442223	2	458.23388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTDNGSPPK_	ENSG00000083857|ENST00000441802|FAT1;FAT1|p.G2934Vfs*3|2|0.37|ENSG00000083857|chr4:186617787-186617787|T/-|frameshift_variant;FAT1|p.N3847Yfs*7|1|0.03|ENSG00000083857|chr4:186601370-186601371|-/TTATA|frameshift_variant;FAT1|p.P3228Lfs*42|1|0.27|ENSG00000083857|chr4:186611556-186611556|G/-|frameshift_variant;FAT1|p.P4313Lfs*36|1|0.34|ENSG00000083857|chr4:186596602-186596602|G/-|frameshift_variant;FAT1|p.Q2933Hfs*14|1|0.33|ENSG00000083857|chr4:186617787-186617788|-/G|frameshift_variant;FAT1|p.T1364Yfs*8|1|0.23|ENSG00000083857|chr4:186636118-186636119|-/A|frameshift_variant;FAT1|p.V1878Cfs*8|2|0.22|ENSG00000083857|chr4:186620955-186620956|-/G|frameshift_variant	67.49366992349736	0.1516260258713357	5				NaN	NaN	0	NaN	449	2669	3118
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3142	14.647	NaN	3420	30	0	836.79	0.214	+			38698	SSKLKEKGYY	10	32	401.5508656700438	1201.6307676103313	3	401.5510559082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSKLKEKGYY_	tr|U7T5D0|U7T5D0_FUSNUMembrane-bindingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00525PE=4SV=1	28.081489160057373	0.6505064946289502	5				NaN	NaN	0	NaN	465	2675	3141
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3143	14.651	NaN	447.29	30	0	48.087	0.035	+			38679	SSISIAWNK	9	31	503.270263671875	NaN	0	503.270263671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSISIAWNK_	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42|TTN;TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;TTN|p.I24998Nfs*2|1|0.35|ENSG00000155657|chr2:178566216-178566217|-/T|frameshift_variant;TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;TTN|p.K26626Nfs*34|1|0.34|ENSG00000155657|chr2:178561331-178561331|T/-|frameshift_variant;TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant;TTN|p.P22810Hfs*10|1|0.03|ENSG00000155657|chr2:178572780-178572781|-/AAAT|frameshift_variant;TTN|p.V27442Cfs*4|1|0.05|ENSG00000155657|chr2:178558107-178558108|-/A|frameshift_variant	24.20275056022122	0.35506675290109213	5				NaN	NaN	0	NaN	466	2675	3141
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3150	14.67	NaN	7282.2	30	0	2137.4	0.215	+			38980	SSSALHVHK	9	60	483.26230921368887	964.5100654941778	2	483.2620849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSSALHVHK_	ENSG00000173480|ENST00000312026|ZNF417;ENSG00000198466|ENST00000339656|ZNF587;nc|ENSG00000173480|Q8TAU3-2|ZNF417;nc|ENSG00000198466|Q96SQ5-2|ZNF587;ZNF417|p.R546Kfs*4|1|0.34|ENSG00000173480|chr19:57908641-57908642|-/T|frameshift_variant	85.86182877749512	0.07653218437724067	5				NaN	NaN	0	NaN	470	2678	3149
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3151	14.673	NaN	1654.7	30	0	138.48	0.106	+			46894	VIQGKSVGK	9	48	458.2851257324219	NaN	0	458.2851257324219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VIQGKSVGK_	ENST00000507834.3_1_4:86167663-86168062:+|nuORF	67.49366992349736	0.1173583512313808	5				NaN	NaN	0	NaN	471	2678	3149
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3152	14.675	NaN	4485.9	30	0	1064.9	0.106	+			48530	VTNPKRIAK	9	58	513.8252239075821	1025.635894881964	2	513.8257446289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTNPKRIAK_	ENSG00000074800|ENST00000234590|ENO1;ENST00000464920.1_1_1:8921421-8930582:-|nuORF;nc|ENSG00000074800|P06733-2|ENO1	120.8684288430529	0.02067403653475984	5				NaN	NaN	0	NaN	472	2678	3149
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3153	14.677	NaN	885.48	30	0	97.637	0.106	+			23639	LAQQKVEK	8	45	472.28261622873885	NaN	0	472.2829284667969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LAQQKVEK_	ENSG00000144395|ENST00000389175|CCDC150;ENST00000494389.5_1_2:197559796-197594150:+|nuORF	104.74654710444128	1.7418937515398478	5				NaN	NaN	0	NaN	473	2678	3149
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3154	14.679	NaN	982.31	30	0	351.91	0.034	+			40026	STMTSGQAR	9	28	469.7222088706251	NaN	0	469.7220764160156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STMTSGQAR_	ENSG00000106609|ENST00000341567|TMEM248;nc|ENSG00000106609|Q9NWD8-2|TMEM248	56.43379154798735	0.16452882468284893	5				NaN	NaN	0	NaN	474	2678	3149
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3166	14.704	NaN	86360	30	0	31266	0.214	+			22801	KVFGGTVHKK	10	93	367.5574193600244	1099.6504286802733	3	367.5574951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVFGGTVHKK_	ENSG00000163655|ENST00000496455|GMPS;GMPS|p.S473Lfs*26|1|0.37|ENSG00000163655|chr3:155922281-155922281|T/-|frameshift_variant;nc|ENSG00000163655|P49915-2|GMPS	114.85826248499774	0.03459167991829056	5				NaN	NaN	0	NaN	483	2681	3165
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3167	14.708	NaN	28470	30	0	3337.7	0.106	+			22802	KVFGGTVHKK	10	78	550.8326637125543	1099.6507744919086	2	550.8338012695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVFGGTVHKK_	ENSG00000163655|ENST00000496455|GMPS;GMPS|p.S473Lfs*26|1|0.37|ENSG00000163655|chr3:155922281-155922281|T/-|frameshift_variant;nc|ENSG00000163655|P49915-2|GMPS	158.47086538638308	0.006991472700766511	5				NaN	NaN	0	NaN	484	2681	3165
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3168	14.71	NaN	2336.1	30	0	597.62	0.106	+			48378	VTHHVSVTK	9	48	504.2854279502825	1006.556302967365	2	504.2861022949219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTHHVSVTK_	ENSG00000164828|ENST00000401592|SUN1;ENST00000413171.6_1_7:892397-912965:+|nuORF;ENST00000475971.5_1_7:893033-912965:+|nuORF;nc|ENSG00000164828|O94901-5|SUN1;nc|ENSG00000164828|O94901-6|SUN1;nc|ENSG00000164828|O94901-9|SUN1;SUN1|p.E739Gfs*27|1|0.41|ENSG00000164828|chr7:872532-872533|-/G|frameshift_variant	77.31757898189308	0.1091473830098891	5				NaN	NaN	0	NaN	485	2681	3165
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3169	14.712	NaN	440.38	30	0	109.03	0.106			+	49060	VVKDKLYDFT	10	22	409.8916320800781	NaN	0	409.8916320800781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVKDKLYDFT_	REV__ENST00000338366.5_1_1:109606819-109606927:-|nuORF	22.579656572578934	0.4201028297492154	5				NaN	NaN	0	NaN	486	2681	3165
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3170	14.713	NaN	1970.1	30	0	671.58	0.035	+			24896	LKLSGEVLR	9	56	507.81948378069205	1013.6244146281841	2	507.8197937011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LKLSGEVLR_	ENST00000339374.10_1_14:21458030-21458174:+|nuORF	58.22992032128504	0.22837015374068087	5				NaN	NaN	0	NaN	487	2681	3165
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3183	14.741	NaN	2048.7	30	0	299.56	0.214	+			19462	KASAVSAIHK	10	54	506.3009033203125	NaN	0	506.3009033203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KASAVSAIHK_	ENSG00000164077|ENST00000296473|MON1A;ENST00000486107.5_1_3:49946449-49946602:-|nuORF;nc|ENSG00000164077|Q86VX9-2|MON1A;nc|ENSG00000164077|Q86VX9-4|MON1A;nc|ENSG00000164077|Q86VX9|MON1A	66.9202029811203	0.17776675719981952	5				NaN	NaN	0	NaN	497	2684	3182
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3184	14.744	NaN	619.86	30	0	151.75	0.106			+	8363	EALLTTFGAP	10	38	510.27239990234375	NaN	0	510.27239990234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EALLTTFGAP_	REV__ENST00000555122.1_1_14:105421221-105423995:-|nuORF	37.15910966729921	0.3781637092648983	5				NaN	NaN	0	NaN	498	2684	3182
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3185	14.746	NaN	1680.1	30	0	233.83	0.106	+			33061	REKGKISNK	9	49	530.3170724838295	1058.619592034459	2	530.8186645507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_REKGKISNK_	ENSG00000134744|ENST00000257177|TUT4;nc|ENSG00000134744|Q5TAX3|TUT4	33.921630207806714	0.48623198279849766	5				NaN	NaN	0	NaN	499	2684	3182
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3186	14.748	NaN	2299.6	30	0	510.84	0.106	+			5615	AVCKAGAVEK	10	55	516.7789839270102	1031.5434149208204	2	517.2803955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_AVC(Carbamidomethyl (C))KAGAVEK_	ENO1|p.D318Mfs*5|1|0.43|ENSG00000074800|chr1:8864006-8864006|C/-|frameshift_variant;ENSG00000074800|ENST00000234590|ENO1;ENST00000464920.1_1_1:8921421-8930582:-|nuORF;nc|ENSG00000074800|P06733-2|ENO1	74.1650062923329	0.2432923583094885	5				NaN	NaN	0	NaN	500	2684	3182
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3187	14.75	NaN	6435.8	30	0	1446.3	0.037			+	7526	DGRVVRAREG	10	42	372.206044733143	NaN	0	372.206298828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DGRVVRAREG_	REV__ENST00000472106.2_1_8:102504814-102555784:+|nuORF	28.5767321226876	0.40634399112407993	5				NaN	NaN	0	NaN	501	2684	3182
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3196	14.77	NaN	3722.3	30	0	468.64	0.142	+			15357	GTVSKVTGK	9	53	438.76172294437595	875.5088929555519	2	438.7615051269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTVSKVTGK_	ENSG00000196526|ENST00000420658|AFAP1;nc|ENSG00000196526|Q8N556|AFAP1	63.42647028704847	0.1850514934184437	5				NaN	NaN	0	NaN	507	2687	3195
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3200	14.786	NaN	1265.9	30	0	424.25	0.214			+	1489	AFPPSSVPG	9	43	429.7197061857001	857.4248594382002	2	429.719970703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AFPPSSVPG_	REV__ENST00000319080.7_12:122630330-122630822:+|nuORF	33.51558372728122	0.4900267029546261	5				NaN	NaN	0	NaN	508	2690	3199
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3201	14.789	NaN	1707.6	30	0	522.87	0.033	+			40386	STTVSPAVQ	9	38	445.23550447374515	888.4564560142903	2	445.23504638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STTVSPAVQ_	ENSG00000148516|ENST00000424869|ZEB1;ENST00000488625.6_1_10:31676182-31816189:+|nuORF;nc|ENSG00000148516|P37275-3|ZEB1;nc|ENSG00000148516|P37275-4|ZEB1;nc|ENSG00000148516|P37275-5|ZEB1;nc|ENSG00000148516|P37275|ZEB1;ZEB1|p.K1058Nfs*20|1|0.36|ENSG00000148516|chr10:31527059-31527059|A/-|frameshift_variant	34.172542307311794	0.4838870758800184	5				NaN	NaN	0	NaN	509	2690	3199
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3207	14.804	NaN	3690.2	30	0	357.28	0.214	+			37803	SMFWVDAELG	10	60	585.7607091186153	1169.5068653040305	2	585.7610473632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_SM(Oxidation (M))FWVDAELG_	ENSG00000136682|ENST00000259199|ZNG1B;ENSG00000147996|ENST00000382405|ZNG1E;ENSG00000172785|ENST00000356521|ZNG1A;ENSG00000196873|ENST00000360171|ZNG1C;ENSG00000215126|ENST00000377391|ZNG1F;ENST00000358604.7_1_2:114196636-114253317:+|nuORF;ENST00000377445.5_9:69238165-69262487:-|nuORF;ENST00000431099.3_1_9:160122-173274:-|nuORF;ENST00000461037.2_9:69234942-69249581:-|nuORF;ENST00000476973.2_9:69243634-69261296:-|nuORF;ENST00000492566.1_1_2:114195517-114220159:+|nuORF;ENST00000495302.5_1_9:151417-166034:-|nuORF;ENST00000495626.2_9:69245151-69262487:-|nuORF;nc|ENSG00000172785|Q9BRT8-2|ZNG1A;nc|ENSG00000172785|Q9BRT8-3|ZNG1A;nc|ENSG00000215126|Q5RIA9-3|ZNG1E	49.44154591367651	0.46214596422418036	5				NaN	NaN	0	NaN	512	2693	3206
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3208	14.808	NaN	1830.3	30	0	308.19	0.036	+			18781	ITQGKDAAVSK	11	52	559.3153746126154	NaN	0	559.3152465820312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ITQGKDAAVSK_	ENSG00000140464|ENST00000268058|PML;ENST00000564725.1_1_15:74290377-74317280:+|nuORF;nc|ENSG00000140464|P29590-10|PML;nc|ENSG00000140464|P29590-11|PML;nc|ENSG00000140464|P29590-12|PML;nc|ENSG00000140464|P29590-13|PML;nc|ENSG00000140464|P29590-14|PML;nc|ENSG00000140464|P29590-2|PML;nc|ENSG00000140464|P29590-3|PML;nc|ENSG00000140464|P29590-4|PML;nc|ENSG00000140464|P29590-5|PML;nc|ENSG00000140464|P29590-8|PML;nc|ENSG00000140464|P29590-9|PML	72.09557110113691	0.12082447305505499	5				NaN	NaN	0	NaN	513	2693	3206
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3219	14.839	NaN	1732.6	30	0	590.28	0.214	+			4943	ATQQLGLQ	8	41	429.737735216508	857.460917499816	2	429.7378234863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATQQLGLQ_	DNAH14|p.I2559Nfs*2|1|0.39|ENSG00000185842|chr1:225337448-225337449|-/A|frameshift_variant;DNAH14|p.T2021Hfs*9|1|0.38|ENSG00000185842|chr1:225289906-225289906|A/-|frameshift_variant;ENSG00000185842|ENST00000682510|DNAH14;nc|ENSG00000185842|Q0VDD8-4|DNAH14;nc|ENSG00000185842|Q0VDD8|DNAH14	53.351449002276354	0.5676011784961348	5				NaN	NaN	0	NaN	518	2699	3218
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3220	14.843	NaN	3681.5	30	0	1538.1	0.036	+			22375	KTIDASVSKK	10	49	359.54869909228705	1075.6242678770611	3	359.882568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTIDASVSKK_	ENSG00000171681|ENST00000261168|ATF7IP;ENST00000535179.1_1_12:14619386-14628955:+|nuORF;ENST00000537653.5_1_12:14576849-14628955:+|nuORF;nc|ENSG00000171681|Q6VMQ6-2|ATF7IP;nc|ENSG00000171681|Q6VMQ6-4|ATF7IP;nc|ENSG00000171681|Q6VMQ6-5|ATF7IP	66.9202029811203	0.3029018092171124	5				NaN	NaN	0	NaN	519	2699	3218
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3227	14.862	NaN	4948	30	0	633.72	0.214	+			19284	KAFQATQQK	9	74	525.2906423417347	1048.5667317502694	2	525.2909545898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAFQATQQK_	ENSG00000145391|ENST00000274031|SETD7	106.68306549817024	0.032382560583716295	5				NaN	NaN	0	NaN	523	2702	3226
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3228	14.865	NaN	1842.6	30	0	414.64	0.106				-1	DNPEYVVND	9	52	553.7337742629617	1105.4529955927233	2	553.73388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))DNPEYVVND_	ENST00000489345.5_1_20:5990431-5990503:+|nuORF	42.396135135203025	0.392153681582562	5				NaN	NaN	0	NaN	524	2702	3226
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3229	14.867	NaN	3584.8	30	0	349.84	0.106	+			43008	TEKQKESTL	9	62	532.2849783959995	1062.5554038587989	2	532.2860107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TEKQKESTL_	ENSG00000153046|ENST00000397588|CDYL;nc|ENSG00000153046|Q9Y232|CDYL	109.43880257439609	0.029570636687953285	5				NaN	NaN	0	NaN	525	2702	3226
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3230	14.869	NaN	877.35	30	0	212.9	0.106				-1	MTGSSAPCK	9	32	469.7075134940001	937.4004740548003	2	469.7070007324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_MTGSSAPC(Carbamidomethyl (C))K_	ENST00000392001.6_1_2:238499129-238499162:-|nuORF	39.252832667884924	0.4290233611298554	5				NaN	NaN	0	NaN	526	2702	3226
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3231	14.871	NaN	3539.7	30	0	878.77	0.106			+	-1	STLNYRLGNCG	11	42	418.8681035200136	1253.5824811602408	3	419.2021789550781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_STLNYRLGNC(Carbamidomethyl (C))G_	REV__ENSG00000110768|ENST00000265963|GTF2H1;REV__ENST00000418116.6_1_11:18344284-18382305:+|nuORF;REV__nc|ENSG00000110768|P32780-2|GTF2H1	24.231819034082204	0.7356191775841856	5				NaN	NaN	0	NaN	527	2702	3226
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3232	14.873	NaN	550.5	30	0	219.89	0.035				-1	MEMPLINQ	8	26	496.23248291015625	NaN	0	496.23248291015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_M(Oxidation (M))EMPLINQ_	ENSG00000169071|ENST00000375708|ROR2	25.450171626174864	1.7418937515398478	5				NaN	NaN	0	NaN	528	2702	3226
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3238	14.887	NaN	1276	30	0	181.84	0.143	+			48512	VTNDKLTSK	9	50	503.28245671610597	1004.550360499012	2	503.2820739746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTNDKLTSK_	ENSG00000135899|ENST00000258381|SP110;ENST00000486146.2_1_2:231068050-231077551:-|nuORF;nc|ENSG00000135899|Q9HB58-3|SP110;nc|ENSG00000135899|Q9HB58-5|SP110;nc|ENSG00000135899|Q9HB58-7|SP110;nc|ENSG00000135899|Q9HB58|SP110	85.16082228582465	0.07850854922700509	5				NaN	NaN	0	NaN	531	2705	3237
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3244	14.904	NaN	3449.6	30	0	839.17	0.141	+			44338	TSGLASTQI	9	46	439.23506563421427	876.4555783352286	2	439.23468017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSGLASTQI_	ENST00000595753.5_1_19:16663592-16663826:-|nuORF	66.42927471994793	0.16001998865088202	5				NaN	NaN	0	NaN	534	2708	3243
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3251	14.922	NaN	1227.4	30	0	576.52	0.144	+			26038	LSLHLPWPR	9	30	559.8254427771013	1117.6363326210026	2	559.8247680664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSLHLPWPR_	ENST00000278980.10_1_20:31291015-31291180:-|nuORF	17.364965105453717	0.6112419832031293	5				NaN	NaN	0	NaN	538	2711	3250
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3256	14.939	NaN	2341.9	30	0	489.14	0.145	+			33070	REKKEESEL	9	66	574.3015970350212	1146.5886411368424	2	574.8041381835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_REKKEESEL_	ENSG00000067082|ENST00000497571|KLF6;nc|ENSG00000067082|Q99612-2|KLF6;nc|ENSG00000067082|Q99612-3|KLF6	88.17693792209575	0.07000514020414955	5				NaN	NaN	0	NaN	540	2714	3255
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3263	14.958	NaN	4398.8	30	0	1956.5	0.145			+	-1	VPVVNKCKMN	10	37	383.2033811257911	1146.5883139775733	3	383.20361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_VPVVNKCKM(Oxidation (M))N_	REV__ENSG00000140009|ENST00000341099|ESR2;REV__ENST00000555483.5_1_14:64699857-64724116:-|nuORF;REV__nc|ENSG00000140009|Q92731-7|ESR2	27.047317107675042	0.6589519614906109	5				NaN	NaN	0	NaN	544	2717	3262
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3270	14.976	NaN	23146	30	0	3926.9	0.143	+			6343	AVTKYTSSK	9	91	492.77148630153596	983.5284196698719	2	492.7716064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVTKYTSSK_	ENSG00000146047|ENST00000274764|H2BC1;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000196890|ENST00000693095|H2BC26;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000436555.1_1_1:228651916-228652012:-|nuORF;nc|ENSG00000203814|Q5QNW6-2|H2BC18;nc|ENSG00000285480|A0A2R8Y619|H2BK1	166.0711670676379	0.003437550387609957	5				NaN	NaN	0	NaN	548	2720	3269
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3283	15.006	NaN	3189.8	30	0	641.94	0.144	+			43121	TEREQKNSL	9	56	552.7860406023053	1103.5575282714105	2	552.7861938476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEREQKNSL_	BICD2|p.R258C|1|0.42|ENSG00000185963|chr9:92720590-92720590|G/A|missense_variant;ENSG00000185963|ENST00000356884|BICD2;nc|ENSG00000185963|Q8TD16|BICD2	75.65223720490533	0.11634833104049533	5				NaN	NaN	0	NaN	558	2723	3282
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3291	15.028	NaN	2043.3	30	0	323.18	0.214			+	17928	IGKSVKQQI	9	52	500.8112020905409	NaN	0	500.81103515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IGKSVKQQI_	REV__ENSG00000127527|ENST00000455140|EPS15L1;REV__nc|ENSG00000127527|Q9UBC2-3|EPS15L1;REV__nc|ENSG00000127527|Q9UBC2-4|EPS15L1;REV__nc|ENSG00000127527|Q9UBC2|EPS15L1	45.97224482568171	0.23445038899310136	5				NaN	NaN	0	NaN	563	2726	3290
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3292	15.031	NaN	2238.4	30	0	635.18	0.106	+			32377	QVALTRHK	8	47	476.7878070257053	951.5610611182107	2	476.7877502441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QVALTRHK_	ENSG00000131018|ENST00000367255|SYNE1;ENST00000461872.6_1_6:152697909-152949466:-|nuORF;nc|ENSG00000131018|Q8NF91-10|SYNE1;nc|ENSG00000131018|Q8NF91-4|SYNE1;nc|ENSG00000131018|Q8NF91-7|SYNE1;SYNE1|p.A1810T|1|0.19|ENSG00000131018|chr6:152417009-152417009|C/T|missense_variant;SYNE1|p.A3854Lfs*20|1|0.4|ENSG00000131018|chr6:152352048-152352048|T/-|frameshift_variant;SYNE1|p.E4738Kfs*25|1|0.12|ENSG00000131018|chr6:152330474-152330474|T/-|frameshift_variant;SYNE1|p.E5862Gfs*83|1|0.12|ENSG00000131018|chr6:152300729-152300738|CCAGACTCCT/-|frameshift_variant;SYNE1|p.G6773Wfs*7|1|0.44|ENSG00000131018|chr6:152236186-152236187|-/A|frameshift_variant;SYNE1|p.I2756*|1|0.12|ENSG00000131018|chr6:152387293-152387293|T/-|frameshift_variant;SYNE1|p.K3606Sfs*5|1|0.25|ENSG00000131018|chr6:152354768-152354768|T/-|frameshift_variant;SYNE1|p.K6871Rfs*22|2|0.52|ENSG00000131018|chr6:152233881-152233881|T/-|frameshift_variant;SYNE1|p.L8283Pfs*8|1|0.19|ENSG00000131018|chr6:152148173-152148174|-/G|frameshift_variant;SYNE1|p.M2832Nfs*53|1|0.25|ENSG00000131018|chr6:152385831-152385832|-/T|frameshift_variant;SYNE1|p.M5602Nfs*13|2|0.32|ENSG00000131018|chr6:152310779-152310780|-/T|frameshift_variant;SYNE1|p.N2333Kfs*2|1|0.32|ENSG00000131018|chr6:152401168-152401169|-/T|frameshift_variant;SYNE1|p.S2126Pfs*10|1|0.33|ENSG00000131018|chr6:152409564-152409564|A/-|frameshift_variant;SYNE1|p.V8635Sfs*12|1|0.15|ENSG00000131018|chr6:152133375-152133375|T/-|frameshift_variant	58.78195531508484	0.5138399468736706	5				NaN	NaN	0	NaN	564	2726	3290
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3293	15.033	NaN	1572.8	30	0	261.62	0.106	+			34996	SAATHLTSK	9	50	458.2480844807738	914.4816160283476	2	458.2481994628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAATHLTSK_	APPL1|p.L65Kfs*4|1|0.39|ENSG00000157500|chr3:57237529-57237530|TT/-|frameshift_variant;APPL1|p.R154Efs*6|1|0.31|ENSG00000157500|chr3:57242893-57242893|A/-|frameshift_variant;ENSG00000157500|ENST00000288266|APPL1;ENST00000482800.5_1_3:57261911-57301862:+|nuORF	68.84614121027924	0.14577793175421136	5				NaN	NaN	0	NaN	565	2726	3290
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3294	15.035	NaN	1101.9	30	0	249.64	0.106	+			39214	STAEESSPPK	10	42	516.7462269617263	NaN	0	516.7470703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STAEESSPPK_	ENSG00000181555|ENST00000409792|SETD2;nc|ENSG00000181555|Q9BYW2-2|SETD2;nc|ENSG00000181555|Q9BYW2-3|SETD2;SETD2|p.N1396Mfs*16|1|0.42|ENSG00000181555|chr3:47120449-47120449|T/-|frameshift_variant;SETD2|p.R1407Gfs*5|1|0.18|ENSG00000181555|chr3:47120417-47120417|T/-|frameshift_variant;SETD2|p.T1652Yfs*14|1|0.26|ENSG00000181555|chr3:47101519-47101520|-/A|frameshift_variant;SETD2|p.T305Qfs*35|2|0.24|ENSG00000181555|chr3:47123723-47123723|T/-|frameshift_variant	47.95952297671804	0.31850267256932663	5				NaN	NaN	0	NaN	566	2726	3290
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3295	15.037	NaN	950.36	30	0	129.66	0.106				-1	AQMEVEQYRRE	11	42	485.55914306640625	NaN	0	485.55914306640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_AQM(Oxidation (M))EVEQYRRE_	ENSG00000213760|ENST00000303892|ATP6V1G2;ENST00000475917.1_1_6:31510065-31514336:-|nuORF;ENST00000481998.1_1_6:31513879-31514336:-|nuORF	15.920654212697714	0.456735970842152	5				NaN	NaN	0	NaN	567	2726	3290
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3296	15.039	NaN	924.79	30	0	73.553	0.038			+	16097	HDEWDNTLSK	10	43	622.779804207045	NaN	0	622.779541015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HDEWDNTLSK_	REV__ENSG00000080824|ENST00000216281|HSP90AA1;REV__ENSG00000096384|ENST00000371646|HSP90AB1;REV__ENST00000554401.1_1_14:102549349-102551760:-|nuORF;REV__HSP90AA1|p.K419Nfs*3|1|0.25|ENSG00000080824|chr14:102083874-102083874|T/-|frameshift_variant;REV__HSP90AA1|p.S330Qfs*48|1|0.21|ENSG00000080824|chr14:102084558-102084558|A/-|frameshift_variant;REV__nc|ENSG00000080824|P07900-2|HSP90AA1	36.446750945000026	0.3805027428805705	5				NaN	NaN	0	NaN	568	2726	3290
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3306	15.063	NaN	826.17	30	0	203.9	0.214			+	21676	KQDRNFKEL	9	43	589.3200073242188	NaN	0	589.3200073242188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KQDRNFKEL_	REV__ENSG00000072501|ENST00000322213|SMC1A	46.45678178249821	0.2311111838007999	5				NaN	NaN	0	NaN	575	2729	3305
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3307	15.066	NaN	7374.4	30	0	3867.1	0.039	+			43622	TINGHNAEVRK	11	43	413.55823504554246	1237.6528757368274	3	413.55780029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TINGHNAEVRK_	ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;ENST00000495810.1_1_7:26235422-26236427:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1	58.62960593111931	0.3356877741313683	5				NaN	NaN	0	NaN	576	2729	3305
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3322	15.105	NaN	1747.4	30	0	277.55	0.146	+			34452	RTYDGDGYKK	10	51	401.5315856933594	NaN	0	401.5315856933594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTYDGDGYKK_	ENSG00000272325|ENST00000607016|NUDT3;NUDT3|p.T76Hfs*5|1|0.07|ENSG00000272325|chr6:34295674-34295674|T/-|frameshift_variant	76.16968421966216	0.118310876128328	5				NaN	NaN	0	NaN	585	2735	3321
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3328	15.124	NaN	3449.4	30	0	426.62	0.144	+			42960	TEKAKEERL	9	50	552.3067947984069	1102.5990366636138	2	552.3080444335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEKAKEERL_	ENSG00000149503|ENST00000394818|INCENP;INCENP|p.E620D|1|0.06|ENSG00000149503|chr11:62145652-62145652|G/T|missense_variant;nc|ENSG00000149503|Q9NQS7-2|INCENP	74.1650062923329	0.12277912660386392	5				NaN	NaN	0	NaN	588	2738	3327
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3335	15.144	NaN	10795	30	0	2873.2	0.214	+			39759	STITKIHSK	9	72	507.80088450732455	1013.5872160814491	2	507.8013000488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STITKIHSK_	ENSG00000138593|ENST00000559471|SECISBP2L;nc|ENSG00000138593|Q93073-2|SECISBP2L	160.8219353732433	0.004346709298329381	5				NaN	NaN	0	NaN	592	2741	3334
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3336	15.148	NaN	6807.9	30	0	2055.8	0.106	+			50757	YEKKAAKL	8	56	475.78716211393623	949.5597712946725	2	475.78704833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YEKKAAKL_	ENSG00000189403|ENST00000341423|HMGB1;nc|ENSG00000067066|P23497|SP100	98.62937762414208	0.25143494708580966	5				NaN	NaN	0	NaN	593	2741	3334
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3337	15.15	NaN	3272	30	0	497.78	0.106	+			3651	ASYGSTTTK	9	50	458.22430819136747	NaN	0	458.2250061035156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASYGSTTTK_	ENSG00000092108|ENST00000458591|SCFD1;ENST00000555259.5_1_14:31112578-31185169:+|nuORF;nc|ENSG00000092108|Q8WVM8-2|SCFD1;nc|ENSG00000092108|Q8WVM8-3|SCFD1	78.26377905018397	0.07733306720594871	5				NaN	NaN	0	NaN	594	2741	3334
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3338	15.151	NaN	8679.2	30	0	2484	0.106	+			13914	GRLHRKTF	8	61	338.86943167534685	1013.5864656262406	3	338.86956787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GRLHRKTF_	ENST00000313732.8_1_16:85009430-85009634:-|nuORF	26.79610172149135	0.7524337208463756	5				NaN	NaN	0	NaN	595	2741	3334
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3339	15.153	NaN	898.01	30	0	241.11	0.037	+			31390	QKIMLEELQ	9	36	566.3055419921875	NaN	0	566.3055419921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QKIMLEELQ_	ENST00000536830.1_1_18:33751093-33754507:+|nuORF	42.396135135203025	0.2590952873412954	5				NaN	NaN	0	NaN	596	2741	3334
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3347	15.172	NaN	13068	30	0	1477.7	0.214	+			2666	AQNAKVIEK	9	72	500.7928793153434	NaN	0	500.79278564453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AQNAKVIEK_	ENSG00000018610|ENST00000644802|STEEP1;ENST00000469448.1_1_X:118673692-118676584:-|nuORF;nc|ENSG00000018610|Q9H5V9-2|STEEP1;nc|ENSG00000018610|Q9H5V9-3|STEEP1	168.25843898104137	0.01208957247110358	5				NaN	NaN	0	NaN	601	2744	3346
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3348	15.175	NaN	17462	30	0	6611.4	0.106				-1	MGVLAKSKCP	10	48	364.19627385843205	1089.5669921754961	3	364.1960144042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_MGVLAKSKC(Carbamidomethyl (C))P_	ENSG00000166788|ENST00000524803|SAAL1;ENST00000530736.1_1_11:18115485-18127588:-|nuORF;ENST00000533851.5_1_11:18111045-18127588:-|nuORF	23.52269567125451	0.6877354443478558	5				NaN	NaN	0	NaN	602	2744	3346
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3349	15.177	NaN	2272.7	30	0	323.82	0.035			+	-1	TVLKRMAAK	9	54	517.3113841840279	1032.6082154348558	2	517.31103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_TVLKRM(Oxidation (M))AAK_	REV__ENSG00000182974|ENST00000332663|OR4M2B;REV__ENSG00000274102|ENST00000614722|OR4M2	36.446750945000026	0.4619375763483977	5				NaN	NaN	0	NaN	603	2744	3346
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3365	15.219	NaN	3409.9	30	0	1816.3	0.212				-1	FTDCNLRGRCG	11	39	649.7902931636891	1297.566033394178	2	649.7904052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_FTDCNLRGRC(Carbamidomethyl (C))G_	ENST00000565652.1_1_15:75660495-75660924:-|nuORF	23.52269567125451	0.7430573033454468	5				NaN	NaN	0	NaN	613	2750	3364
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3366	15.223	NaN	1674	30	0	539.37	0.106			+	8806	EEKQTVRK	8	49	509.2882676878122	1016.5619824424244	2	509.2896423339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EEKQTVRK_	REV__ENSG00000197063|ENST00000357736|MAFG;REV__ENSG00000198517|ENST00000343242|MAFK	54.776311868738084	0.5534952410049249	5				NaN	NaN	0	NaN	614	2750	3364
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3367	15.225	NaN	1464.7	30	0	140.93	0.106			+	25853	LSEVERIA	8	52	458.75837407406465	NaN	0	458.7582092285156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSEVERIA_	REV__UTRN|p.T268S|1|0.22|ENSG00000152818|chr6:144429688-144429688|A/T|missense_variant	60.97194046774394	1.7418937515398478	5				NaN	NaN	0	NaN	615	2750	3364
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3368	15.226	NaN	2702.6	30	0	589.67	0.106	+			6490	AWARARATGLQ	11	54	400.89202880859375	NaN	0	400.89202880859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AWARARATGLQ_	ENST00000264167.8_1_2:178257542-178257677:+|nuORF	30.568863376406313	0.42918353898720446	5				NaN	NaN	0	NaN	616	2750	3364
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3369	15.228	NaN	1139.9	30	0	215.68	0.106			+	7785	DPEKEKKAQ	9	33	358.1930847167969	NaN	0	358.1930847167969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DPEKEKKAQ_	REV__ENSG00000040341|ENST00000524300|STAU2;REV__nc|ENSG00000040341|Q9NUL3-2|STAU2;REV__nc|ENSG00000040341|Q9NUL3-3|STAU2;REV__nc|ENSG00000040341|Q9NUL3-4|STAU2;REV__nc|ENSG00000040341|Q9NUL3-6|STAU2;REV__nc|ENSG00000040341|Q9NUL3-7|STAU2;REV__nc|ENSG00000040341|Q9NUL3-8|STAU2;REV__STAU2|p.C491Lfs*31|1|0.39|ENSG00000040341|chr8:73552072-73552073|-/G|frameshift_variant;REV__STAU2|p.K410Ifs*9|1|0.07|ENSG00000040341|chr8:73552313-73552314|-/A|frameshift_variant	23.04248740728303	0.3589936788096251	5				NaN	NaN	0	NaN	617	2750	3364
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3370	15.23	NaN	489.1	30	0	116.34	0.035			+	23486	LAFNTSQLR	9	29	525.29181312353	NaN	0	525.2918701171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LAFNTSQLR_	REV__ENSG00000107262|ENST00000634734|BAG1;REV__ENST00000379707.7_1_9:33255219-33262163:-|nuORF;REV__nc|ENSG00000107262|Q99933-3|BAG1;REV__nc|ENSG00000107262|Q99933-4|BAG1	19.1035232394073	0.3723251548669699	5				NaN	NaN	0	NaN	618	2750	3364
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3371	15.231	NaN	497.79	30	0	47.575	0.144	+			13442	GLHSAELQLS	10	27	352.189453125	NaN	0	352.189453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GLHSAELQLS_	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42|TTN;TTN|p.A12650Gfs*4|1|0.4|ENSG00000155657|chr2:178633489-178633490|-/T|frameshift_variant;TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;TTN|p.A7105Cfs*8|1|0.32|ENSG00000155657|chr2:178722523-178722524|-/A|frameshift_variant;TTN|p.D20259Rfs*40|1|0.44|ENSG00000155657|chr2:178583105-178583106|-/T|frameshift_variant;TTN|p.D21555Ifs*6|1|0.33|ENSG00000155657|chr2:178576659-178576659|G/-|frameshift_variant;TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;TTN|p.D9026Afs*9|1|0.26|ENSG00000155657|chr2:178711205-178711208|CTGT/-|frameshift_variant;TTN|p.E15132Sfs*22|1|0.27|ENSG00000155657|chr2:178612094-178612094|C/-|frameshift_variant;TTN|p.E20392Dfs*6|1|0.04|ENSG00000155657|chr2:178582357-178582358|-/TTTAAAATTA|frameshift_variant;TTN|p.E20392Kfs*4|1|0.02|ENSG00000155657|chr2:178582359-178582360|-/TTTT|frameshift_variant;TTN|p.E9224Gfs*8|1|0.04|ENSG00000155657|chr2:178709697-178709698|-/TCTTATGATATCTTGAC|frameshift_variant;TTN|p.F18705Lfs*8|1|0.37|ENSG00000155657|chr2:178590687-178590687|A/-|frameshift_variant;TTN|p.G12742Vfs*2|1|0.05|ENSG00000155657|chr2:178632983-178632983|C/-|frameshift_variant;TTN|p.G14712Dfs*11|1|0.37|ENSG00000155657|chr2:178614341-178614341|G/-|frameshift_variant;TTN|p.G19920Afs*12|1|0.42|ENSG00000155657|chr2:178584961-178584961|G/-|frameshift_variant;TTN|p.G22029Efs*22|2|0.13|ENSG00000155657|chr2:178575125-178575125|T/-|frameshift_variant;TTN|p.I10495Nfs*4|1|0.37|ENSG00000155657|chr2:178685288-178685289|-/T|frameshift_variant;TTN|p.I24998Nfs*2|1|0.35|ENSG00000155657|chr2:178566216-178566217|-/T|frameshift_variant;TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;TTN|p.I3592Lfs*36|1|0.25|ENSG00000155657|chr2:178741508-178741508|T/-|frameshift_variant;TTN|p.I9225Cfs*34|1|0.06|ENSG00000155657|chr2:178709695-178709696|-/ATATCCATGAGCA|frameshift_variant;TTN|p.K10923Rfs*104|2|0.23|ENSG00000155657|chr2:178679362-178679362|T/-|frameshift_variant;TTN|p.K11381Nfs*25|1|0.07|ENSG00000155657|chr2:178671133-178671133|T/-|frameshift_variant;TTN|p.K11556Sfs*15|1|0.39|ENSG00000155657|chr2:178652287-178652287|T/-|frameshift_variant;TTN|p.K14271Qfs*5|1|0.02|ENSG00000155657|chr2:178617351-178617352|-/G|frameshift_variant;TTN|p.K26626Nfs*34|1|0.34|ENSG00000155657|chr2:178561331-178561331|T/-|frameshift_variant;TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;TTN|p.K4988Ifs*4|1|0.06|ENSG00000155657|chr2:178733381-178733382|-/GAAAATGATG|frameshift_variant;TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant;TTN|p.L7142*|1|0.06|ENSG00000155657|chr2:178722407-178722411|TCTTA/-|frameshift_variant;TTN|p.M4154Nfs*4|1|0.21|ENSG00000155657|chr2:178739821-178739822|-/T|frameshift_variant;TTN|p.N13487Tfs*49|1|0.34|ENSG00000155657|chr2:178621335-178621335|T/-|frameshift_variant;TTN|p.N15496Ifs*16|1|0.09|ENSG00000155657|chr2:178610116-178610116|T/-|frameshift_variant;TTN|p.N6458Mfs*74|1|0.44|ENSG00000155657|chr2:178725998-178725998|T/-|frameshift_variant;TTN|p.N7648Tfs*27|1|0.32|ENSG00000155657|chr2:178719598-178719598|T/-|frameshift_variant;TTN|p.N8964Tfs*27|1|0.11|ENSG00000155657|chr2:178711988-178711988|T/-|frameshift_variant;TTN|p.P16126Rfs*3|1|0.25|ENSG00000155657|chr2:178607301-178607302|TG/-|frameshift_variant;TTN|p.P22810Hfs*10|1|0.03|ENSG00000155657|chr2:178572780-178572781|-/AAAT|frameshift_variant;TTN|p.P4036Qfs*14|1|0.19|ENSG00000155657|chr2:178740175-178740175|G/-|frameshift_variant;TTN|p.S5235Hfs*25|1|0.06|ENSG00000155657|chr2:178732315-178732316|-/ATATATG|frameshift_variant;TTN|p.T4116Sfs*25|1|0.04|ENSG00000155657|chr2:178739937-178739938|-/CTATTATATATGAGGAA|frameshift_variant;TTN|p.V10632Yfs*16|1|0.16|ENSG00000155657|chr2:178683254-178683254|T/-|frameshift_variant;TTN|p.V11008Sfs*13|1|0.33|ENSG00000155657|chr2:178678146-178678147|-/T|frameshift_variant;TTN|p.V11345Ffs*4|1|0.4|ENSG00000155657|chr2:178672044-178672044|T/-|frameshift_variant;TTN|p.V13823*|1|0.28|ENSG00000155657|chr2:178620027-178620027|C/-|frameshift_variant;TTN|p.V22573Cfs*4|2|0.31|ENSG00000155657|chr2:178573492-178573492|C/-|frameshift_variant;TTN|p.V27442Cfs*4|1|0.05|ENSG00000155657|chr2:178558107-178558108|-/A|frameshift_variant;TTN|p.W5728Mfs*3|1|0.07|ENSG00000155657|chr2:178730267-178730268|-/T|frameshift_variant	19.996771675451527	0.4201028297492154	5				NaN	NaN	0	NaN	619	2750	3364
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3378	15.251	NaN	20137	30	0	5549.7	0.214	+			44596	TTCSKVFKK	9	74	366.87068350832976	1097.5902211251894	3	366.870849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_TTC(Carbamidomethyl (C))SKVFKK_	ENSG00000167625|ENST00000301215|ZNF526	70.8162118820467	0.13725933411854815	5				NaN	NaN	0	NaN	623	2753	3377
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3379	15.255	NaN	5407.2	30	0	1545.3	0.106	+			35396	SAQIVGPGP	9	50	413.2267763118418	824.4389996904836	2	413.2259826660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAQIVGPGP_	ENSG00000182149|ENST00000378799|IST1;ENST00000536027.1_1_16:71958181-71961713:+|nuORF;ENST00000541180.1_1_16:71958590-71961713:+|nuORF;ENST00000587765.1_1_19:38282860-38283352:+|nuORF;nc|ENSG00000182149|P53990-2|IST1;nc|ENSG00000182149|P53990-5|IST1;nc|ENSG00000182149|P53990-6|IST1;nc|ENSG00000182149|P53990|IST1	38.80614096846853	0.43426287593479557	5				NaN	NaN	0	NaN	624	2753	3377
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3380	15.257	NaN	2936.8	30	0	1447.5	0.106				-1	MKKNTNGS	8	40	448.21691283235396	894.4192727315079	2	448.21746826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))KKNTNGS_	ENST00000372970.6_1_20:42835951-42838705:-|nuORF	38.80614096846853	0.6637206697844082	5				NaN	NaN	0	NaN	625	2753	3377
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3381	15.258	NaN	462.73	30	0	344.43	0.037			+	-1	LIPMHCELR	9	8	584.8035782863054	NaN	0	584.8034057617188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_LIPMHC(Carbamidomethyl (C))ELR_	REV__ENST00000475777.2_1_12:110882884-110883061:-|nuORF	7.690282842768113	0.40727630907727536	5				NaN	NaN	0	NaN	626	2753	3377
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3395	15.288	NaN	416500	30	0	50819	0.166	+			30920	QELEKAKR	8	118	501.29077335723105	1000.5669937812621	2	501.2906494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QELEKAKR_	ENSG00000133026|ENST00000360416|MYH10;ENST00000465458.1_1_17:8409499-8413222:-|nuORF;nc|ENSG00000133026|P35580-2|MYH10;nc|ENSG00000133026|P35580-3|MYH10;nc|ENSG00000133026|P35580-5|MYH10;nc|ENSG00000133026|P35580|MYH10	98.62937762414208	0.25143494708580966	5				NaN	NaN	0	NaN	637	2756	3394
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3396	15.291	NaN	20492	30	0	11422	0.106	+			5223	ATTTTVTTK	9	58	462.2556659767038	922.4967790202077	2	462.2553405761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATTTTVTTK_	ENSG00000163349|ENST00000426820|HIPK1;HIPK1|p.N462*|1|0.27|ENSG00000163349|chr1:113955620-113955621|-/T|frameshift_variant;nc|ENSG00000163349|Q86Z02-2|HIPK1	114.8945686534367	0.024290463251177924	5				NaN	NaN	0	NaN	638	2756	3394
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3397	15.293	NaN	8302.6	30	0	2792.8	0.106	+			15560	GVFKETKQK	9	63	355.5413513183594	NaN	0	355.5413513183594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GVFKETKQK_	ENSG00000119927|ENST00000348367|GPAM	40.77816245573522	0.2702456086868081	5				NaN	NaN	0	NaN	639	2756	3394
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3398	15.295	NaN	803.12	30	0	240.73	0.106			+	-1	MCMDRIKR	8	34	563.2679443359375	NaN	0	563.2679443359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_MC(Carbamidomethyl (C))M(Oxidation (M))DRIKR_	REV__ENST00000229812.7_1_6:36489548-36489587:-|nuORF	40.5726180659479	1.7418937515398478	5				NaN	NaN	0	NaN	640	2756	3394
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3399	15.297	NaN	14025	30	0	2157.3	0.106			+	17064	HRCEELQQ	8	63	550.2510433741521	1098.4875338151041	2	550.2513427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_HRC(Carbamidomethyl (C))EELQQ_	REV__DNHD1|p.S3597Rfs*6|1|0.1|ENSG00000179532|chr11:6565718-6565719|-/AG|frameshift_variant;REV__DNHD1|p.T4259Pfs*33|2|0.33|ENSG00000179532|chr11:6568772-6568772|C/-|frameshift_variant;REV__ENSG00000179532|ENST00000254579|DNHD1	55.50420428727701	0.5462892107279674	5				NaN	NaN	0	NaN	641	2756	3394
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3400	15.298	NaN	3988.1	30	0	501.21	0.035			+	18404	IRTNLQEK	8	66	501.29077335723105	1000.5669937812621	2	503.73248291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IRTNLQEK_	REV__ADAM11|p.D614Tfs*33|1|0.15|ENSG00000073670|chr17:44777537-44777537|G/-|frameshift_variant;REV__ADAM11|p.G347Afs*11|1|0.26|ENSG00000073670|chr17:44774337-44774337|G/-|frameshift_variant;REV__ENSG00000073670|ENST00000200557|ADAM11;REV__nc|ENSG00000073670|O75078-2|ADAM11	37.81151784470057	0.6698925118251505	5				NaN	NaN	0	NaN	642	2756	3394
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3413	15.325	NaN	5456.3	30	0	850.94	0.214	+			34101	RSQKPVMVK	9	62	536.8186920887026	1071.6228312442051	2	536.8193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RSQKPVMVK_	ENSG00000108107|ENST00000344063|RPL28;ENST00000412461.2_1_22:19043875-19044022:+|nuORF;ENST00000560583.5_1_19:55899571-55899697:+|nuORF	75.65223720490533	0.11634833104049533	5				NaN	NaN	0	NaN	652	2759	3412
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3414	15.329	NaN	8082.9	30	0	4905.8	0.106	+			4831	ATPGAQLAP	9	48	413.2267763118418	824.4389996904836	2	413.22662353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATPGAQLAP_	ENSG00000095539|ENST00000210633|SEMA4G;nc|ENSG00000095539|Q9NTN9|SEMA4G	47.91560031466742	0.327412564698279	5				NaN	NaN	0	NaN	653	2759	3412
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3415	15.331	NaN	3419	30	0	1094.3	0.106	+			37085	SISHPNLQK	9	63	512.2822265625	NaN	0	512.2822265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SISHPNLQK_	ENST00000519181.5_1_8:103916517-103989979:+|nuORF	47.657333605630114	0.2228375344433429	5				NaN	NaN	0	NaN	654	2759	3412
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3416	15.333	NaN	8235.3	30	0	1288.2	0.106	+			2923	ASCNQTLSK	9	66	504.74248295228136	1007.4704129713627	2	504.7427673339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_ASC(Carbamidomethyl (C))NQTLSK_	ENSG00000155256|ENST00000684270|ZFYVE27;ENST00000477521.5_1_10:99516996-99519054:+|nuORF;nc|ENSG00000155256|Q5T4F4-2|ZFYVE27;nc|ENSG00000155256|Q5T4F4-3|ZFYVE27;nc|ENSG00000155256|Q5T4F4-5|ZFYVE27;nc|ENSG00000155256|Q5T4F4-6|ZFYVE27;nc|ENSG00000155256|Q5T4F4-7|ZFYVE27;nc|ENSG00000155256|Q5T4F4-8|ZFYVE27	174.8648734531126	0.001936507438084573	5				NaN	NaN	0	NaN	655	2759	3412
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3417	15.334	NaN	852.67	30	0	109.69	0.036	+			13705	GPRKGREVY	9	35	531.2967614464801	1060.5789699597601	2	531.297607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GPRKGREVY_	ENSG00000063177|ENST00000549920|RPL18;ENST00000416734.1_1_7:121080890-121081274:-|nuORF;ENST00000547892.1_1_19:49119132-49119324:-|nuORF;ENST00000549533.1_1_19:49118631-49119324:-|nuORF;ENST00000551749.5_1_19:49119132-49119489:-|nuORF;ENST00000552347.5_1_19:49118631-49119489:-|nuORF;nc|ENSG00000063177|Q07020-2|RPL18	24.519189625965996	0.574102787014149	5				NaN	NaN	0	NaN	656	2759	3412
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3431	15.364	NaN	2564.1	30	0	603.84	0.214	+			5267	ATVDKTVCK	9	59	511.27083605786305	1020.5271191825261	2	511.2709655761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_ATVDKTVC(Carbamidomethyl (C))K_	ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1670Tfs*23|1|0.29|ENSG00000174231|chr17:1659487-1659487|C/-|frameshift_variant	98.62937762414208	0.04060045538121712	5				NaN	NaN	0	NaN	667	2762	3430
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3432	15.368	NaN	1222.6	30	0	242.08	0.106	+			34443	RTVSDSIKK	9	41	517.3046263532254	NaN	0	517.3046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RTVSDSIKK_	ENSG00000137076|ENST00000314888|TLN1;nc|ENSG00000137076|Q9Y490-2|TLN1	41.42661286455405	0.26577678759562784	5				NaN	NaN	0	NaN	668	2762	3430
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3433	15.37	NaN	1170.8	30	0	179.26	0.033	+			40828	SVEGPSQAK	9	37	451.73228430788447	NaN	0	451.732421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVEGPSQAK_	ENSG00000196924|ENST00000369850|FLNA;FLNA|p.A1026Lfs*20|1|0.42|ENSG00000196924|chrX:154361439-154361439|C/-|frameshift_variant;FLNA|p.G2237Efs*109|1|0.28|ENSG00000196924|chrX:154352240-154352240|C/-|frameshift_variant;FLNA|p.Q1716Sfs*23|2|0.38|ENSG00000196924|chrX:154354896-154354896|G/-|frameshift_variant;FLNA|p.R2520Vfs*16|1|0.7|ENSG00000196924|chrX:154349560-154349560|G/-|frameshift_variant;nc|ENSG00000196924|P21333-2|FLNA	42.86426827375447	0.2558691296974908	5				NaN	NaN	0	NaN	669	2762	3430
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3445	15.395	NaN	4643.1	30	0	2544.5	0.214	+			407	AASSSSLEK	9	43	440.2245316072787	878.4345102813575	2	440.22442626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AASSSSLEK_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196834|ENST00000451531|POTEI;ENST00000417985.1_1_X:46147855-46148119:-|nuORF;ENST00000418987.2_1_9:103493819-103494230:+|nuORF;ENST00000423183.1_1_3:12112396-12112453:+|nuORF;ENST00000450451.1_1_1:238090483-238090852:+|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2	51.19269402634007	0.2889735674168909	5				NaN	NaN	0	NaN	678	2765	3444
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3446	15.399	NaN	1708.6	30	0	415.48	0.106				-1	KVCMLCSVGYH	11	43	656.797607421875	NaN	0	656.797607421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_KVC(Carbamidomethyl (C))M(Oxidation (M))LCSVGYH_	ENST00000512760.5_1_4:79841695-79860421:-|nuORF	24.519189625965996	0.45614437233802635	5				NaN	NaN	0	NaN	679	2765	3444
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3447	15.401	NaN	2020.1	30	0	278.05	0.106	+			35112	SAGHGLPAK	9	48	419.2326230873875	836.450693241575	2	419.2322692871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAGHGLPAK_	ENSG00000113648|ENST00000511689|MACROH2A1;ENST00000511494.5_1_5:134670668-134681802:-|nuORF;ENST00000512507.5_1_5:134670668-134688768:-|nuORF;nc|ENSG00000113648|O75367-3|MACROH2A1;nc|ENSG00000113648|O75367|MACROH2A1	71.87747018426188	0.13267044672804276	5				NaN	NaN	0	NaN	680	2765	3444
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3448	15.403	NaN	1529.9	30	0	350.11	0.034	+			4597	ATLHGSNMK	9	43	479.74154680317974	NaN	0	479.7416076660156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATLHGSNMK_	ENSG00000198804|ENST00000361624|MT-CO1;L1PA6_dup546|chr2:49227587-49231532:-|4.547726375381561|0.2927699401366612|3.96|483.0|61|2|sense	37.81151784470057	0.28666463014928195	5				NaN	NaN	0	NaN	681	2765	3444
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3458	15.424	NaN	34352	30	0	6859.6	0.214	+			41605	SVQHVDAAEK	10	83	542.274930885252	1082.535308837304	2	542.275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVQHVDAAEK_	ENST00000585682.5_1_4:159092526-159092595:-|nuORF	144.55000592163006	0.009540960254669297	5				NaN	NaN	0	NaN	688	2768	3457
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3459	15.428	NaN	3556.3	30	0	661.12	0.106				-1	STVCPFTQQ	9	48	534.246429760649	1066.478306588098	2	534.2473754882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_STVC(Carbamidomethyl (C))PFTQQ_	RAB11FIP1|p.Q714Tfs*22|1|0.3|ENSG00000156675|chr8:37872662-37872663|-/T|frameshift_variant	53.351449002276354	0.2690372970092375	5				NaN	NaN	0	NaN	689	2768	3457
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3460	15.43	NaN	10005	30	0	3163.9	0.106			+	-1	SVCDYILTL	9	53	361.8524108773557	1082.535403232267	3	361.8523254394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SVC(Carbamidomethyl (C))DYILTL_	REV__ENST00000379391.7_2_12:57452318-57452450:-|nuORF	37.81151784470057	0.4459294069877048	5				NaN	NaN	0	NaN	690	2768	3457
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3461	15.432	NaN	1442.4	30	0	101.27	0.106	+			6093	AVNKQLADK	9	49	493.7848532524646	985.5551535717292	2	493.7846984863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVNKQLADK_	ENSG00000166595|ENST00000422424|CIAO2B;ENST00000562362.5_1_16:66966108-66968009:-|nuORF	70.8162118820467	0.13725933411854815	5				NaN	NaN	0	NaN	691	2768	3457
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3462	15.434	NaN	564.51	30	0	326.69	0.038			+	-1	RKICNSSEEM	10	17	606.7711181640625	NaN	0	606.7711181640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_RKICNSSEEM(Oxidation (M))_	REV__ENST00000272227.7_1_2:10937307-10942651:-|nuORF	9.705651100619752	0.4201028297492154	5				NaN	NaN	0	NaN	692	2768	3457
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3476	15.463	NaN	1026.1	30	0	230.42	0.214	+			22539	KTRITQMH	8	46	515.7764642294254	1029.5383755256507	2	515.7762451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_KTRITQM(Oxidation (M))H_	ENST00000537515.5_1_2:183583003-183584764:+|nuORF	66.42927471994793	0.4381325844043345	5				NaN	NaN	0	NaN	703	2771	3475
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3477	15.466	NaN	451.52	30	0	150.83	0.035			+	27716	MQISMKRV	8	18	496.7725830078125	NaN	0	496.7725830078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MQISMKRV_	REV__ENST00000335255.9_2_17:80561515-80561617:+|nuORF	24.20275056022122	1.7418937515398478	5				NaN	NaN	0	NaN	704	2771	3475
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3488	15.492	NaN	6303.9	30	0	814.63	0.214	+			35973	SEGTKAVTK	9	65	460.7558307042456	919.4971084752913	2	460.756103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEGTKAVTK_	ENSG00000124635|ENST00000339812|H2BC11;ENSG00000146047|ENST00000274764|H2BC1;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000196890|ENST00000693095|H2BC26;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000369385.5_1_1:149814898-149814982:+|nuORF;ENST00000436555.1_1_1:228651916-228652012:-|nuORF;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;HIST1H2BD|p.Y122H|1|0.36|ENSG00000158373|chr6:26158533-26158533|T/C|missense_variant;nc|ENSG00000203814|Q5QNW6-2|H2BC18;nc|ENSG00000285480|A0A2R8Y619|H2BK1	126.24258497203832	0.01742065577488747	5				NaN	NaN	0	NaN	712	2774	3487
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3489	15.495	NaN	10395	30	0	6208.3	0.106			+	5998	AVMAAKMAKLG	11	30	364.20842005058154	1089.6034307519446	3	364.2084045410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVMAAKMAKLG_	REV__ENST00000482054.1_1_9:90343611-90343650:+|nuORF	20.030474535948922	0.7766990143561855	5				NaN	NaN	0	NaN	713	2774	3487
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3490	15.497	NaN	1509.3	30	0	425.83	0.106			+	1600	AGLKSSRI	8	45	416.25628662109375	NaN	0	416.25628662109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AGLKSSRI_	REV__ENSG00000101162|ENST00000217133|TUBB1	42.47446043378293	1.7418937515398478	5				NaN	NaN	0	NaN	714	2774	3487
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3491	15.499	NaN	1762.9	30	0	380.63	0.106	+			17132	HSRNEGTATY	10	52	568.2607898420764	1134.5070267509527	2	568.2603149414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HSRNEGTATY_	ENSG00000173801|ENST00000393931|JUP;JUP|p.A645T|1|0.28|ENSG00000173801|chr17:41757528-41757528|C/T|missense_variant	76.16968421966216	0.22691431239609447	5				NaN	NaN	0	NaN	715	2774	3487
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3492	15.501	NaN	1631.2	30	0	792.18	0.035			+	-1	AVALVMVLLG	10	28	334.5411682128906	NaN	0	334.5411682128906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_AVALVM(Oxidation (M))VLLG_	REV__ENSG00000155269|ENST00000382487|GPR78	31.529811441608018	0.39664753963064203	5				NaN	NaN	0	NaN	716	2774	3487
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3516	15.556	NaN	7303	30	0	2792.2	0.214	+			5303	ATVKLEHAK	9	64	498.79583134937576	995.5771097655515	2	498.7957458496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATVKLEHAK_	ENSG00000118705|ENST00000237530|RPN2;nc|ENSG00000118705|P04844-2|RPN2	104.42354056486148	0.0346881550498418	5				NaN	NaN	0	NaN	734	2780	3515
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3517	15.559	NaN	11234	30	0	3047.9	0.106	+			5304	ATVKLEHAK	9	63	332.8662205479546	995.5768322440638	3	332.86614990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATVKLEHAK_	ENSG00000118705|ENST00000237530|RPN2;nc|ENSG00000118705|P04844-2|RPN2	34.172542307311794	0.4838870758800184	5				NaN	NaN	0	NaN	735	2780	3515
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3518	15.561	NaN	3439.9	30	0	487.35	0.106	+			13742	GQCGNQIGAK	10	58	516.7485168361293	1031.4824807390585	2	516.7489624023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_GQC(Carbamidomethyl (C))GNQIGAK_	CON__ENSEMBL:ENSBTAP00000025008;ENSG00000101162|ENST00000217133|TUBB1;ENSG00000104833|ENST00000264071|TUBB4A;ENSG00000137267|ENST00000333628|TUBB2A;ENSG00000137285|ENST00000259818|TUBB2B;ENSG00000173213|ENST00000308911|TUBB8B;ENSG00000188229|ENST00000340384|TUBB4B;ENSG00000196230|ENST00000327892|TUBB;ENSG00000258947|ENST00000315491|TUBB3;ENSG00000261456|ENST00000568584|TUBB8;ENST00000489942.1_1_6:3155224-3157697:-|nuORF;ENST00000554116.5_1_16:89989809-89998148:+|nuORF;ENST00000554927.1_1_16:89989809-89999206:+|nuORF;ENST00000604929.1_1_9:140135770-140136775:+|nuORF;TUBB|p.G142Afs*23|1|0.35|ENSG00000196230|chr6:30723483-30723483|G/-|frameshift_variant;TUBB2B|p.D177Hfs*21|1|0.32|ENSG00000137285|chr6:3225559-3225560|TC/-|frameshift_variant;TUBB4A|p.G141Vfs*24|2|0.35|ENSG00000104833|chr19:6496077-6496077|C/-|frameshift_variant	110.11987700582712	0.04764356995208832	5				NaN	NaN	0	NaN	736	2780	3515
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3519	15.563	NaN	2696.7	30	0	812.26	0.106	+			18917	IVNASTTNK	9	52	474.26179987829386	946.5090468233877	2	474.26202392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IVNASTTNK_	ENSG00000078269|ENST00000355585|SYNJ2;nc|ENSG00000078269|O15056-2|SYNJ2;nc|ENSG00000078269|O15056-3|SYNJ2;SYNJ2|p.L1226Tfs*32|1|0.22|ENSG00000078269|chr6:158093029-158093030|-/C|frameshift_variant;SYNJ2|p.P1225Hfs*19|1|0.23|ENSG00000078269|chr6:158093030-158093030|C/-|frameshift_variant	78.26377905018397	0.10505600812668463	5				NaN	NaN	0	NaN	737	2780	3515
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3520	15.565	NaN	665.75	30	0	85.004	0.04				-1	LNEMDNRYEGL	11	34	685.3087569097847	NaN	0	685.3090209960938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_LNEM(Oxidation (M))DNRYEGL_	ENSG00000180660|ENST00000379919|MAB21L1;MAB21L1|p.G245Afs*13|1|0.37|ENSG00000180660|chr13:35475405-35475405|C/-|frameshift_variant	20.83715455343099	0.456735970842152	5				NaN	NaN	0	NaN	738	2780	3515
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3530	15.589	NaN	3296.6	30	0	546.46	0.143	+			39236	STAKHVFEK	9	69	523.7856106112968	1045.5566682893934	2	523.7864990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STAKHVFEK_	ENSG00000184445|ENST00000333479|KNTC1;ENST00000436959.7_1_12:123087118-123101977:+|nuORF;KNTC1|p.K1646Nfs*2|2|0.35|ENSG00000184445|chr12:122603073-122603073|A/-|frameshift_variant;KNTC1|p.K1646Tfs*12|1|0.13|ENSG00000184445|chr12:122603073-122603074|AA/-|frameshift_variant;KNTC1|p.L1647Tfs*12|1|0.3|ENSG00000184445|chr12:122603072-122603073|-/A|frameshift_variant;nc|ENSG00000184445|P50748-2|KNTC1	88.17693792209575	0.07000514020414955	5				NaN	NaN	0	NaN	745	2783	3529
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3537	15.608	NaN	4670.8	30	0	918.55	0.214	+			39064	SSSRAVVVK	9	52	466.77989387814677	931.5452348230936	2	466.7799987792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSSRAVVVK_	CON__H-INV:HIT000292931;CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	46.45678178249821	0.34452392205506005	5				NaN	NaN	0	NaN	749	2786	3536
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3538	15.611	NaN	984.25	30	0	158.06	0.106	+			19647	KDKVMCIE	8	38	483.2435394953807	964.4725260575614	2	483.24383544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KDKVMCIE_	ENSG00000115415|ENST00000361099|STAT1;nc|ENSG00000115415|P42224-2|STAT1;STAT1|p.D534Mfs*14|1|0.24|ENSG00000115415|chr2:190980653-190980653|G/-|frameshift_variant;STAT1|p.K567Nfs*25|2|0.2|ENSG00000115415|chr2:190979798-190979798|T/-|frameshift_variant	53.351449002276354	0.5676011784961348	5				NaN	NaN	0	NaN	750	2786	3536
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3539	15.613	NaN	1825.1	30	0	250.9	0.036			+	-1	RCQTLLRQ	8	52	537.7957285891314	1073.5769042450627	2	537.802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_RC(Carbamidomethyl (C))QTLLRQ_	REV__ENSG00000185988|ENST00000454744|PLK5;REV__nc|ENSG00000185988|Q496M5-2|PLK5	34.172542307311794	0.6954784234644539	5				NaN	NaN	0	NaN	751	2786	3536
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3550	15.637	NaN	1449.9	30	0	172.18	0.214	+			32454	QVKNEKKQ	8	51	501.29077335723105	1000.5669937812621	2	501.2909851074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QVKNEKKQ_	DBF4|p.N25Kfs*11|2|0.39|ENSG00000006634|chr7:87878073-87878074|-/A|frameshift_variant	58.22992032128504	0.519305013932957	5				NaN	NaN	0	NaN	759	2789	3549
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3551	15.64	NaN	975.21	30	0	229.75	0.106	+			32765	RAQVPGHQ	8	36	446.74053955078125	NaN	0	446.74053955078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RAQVPGHQ_	ENSG00000133597|ENST00000072869|ADCK2	26.79610172149135	1.7418937515398478	5				NaN	NaN	0	NaN	760	2789	3549
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3552	15.642	NaN	894.42	30	0	101.91	0.034				-1	SVACPGAQK	9	36	459.2289524566623	916.4433519801246	2	459.2286376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SVAC(Carbamidomethyl (C))PGAQK_	ENSG00000127993|ENST00000265732|RBM48;nc|ENSG00000127993|Q5RL73-2|RBM48	35.61828744233558	0.47037581924408073	5				NaN	NaN	0	NaN	761	2789	3549
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3562	15.664	NaN	1974.7	30	0	258.34	0.144	+			26151	LSQILMEQL	9	55	537.7957285891314	1073.5769042450627	2	537.7967529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSQILMEQL_	ENSG00000128915|ENST00000261520|ICE2;ICE2|p.R760Tfs*25|1|0.32|ENSG00000128915|chr15:60447987-60447988|-/T|frameshift_variant	51.19269402634007	0.2889735674168909	5				NaN	NaN	0	NaN	768	2792	3561
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3569	15.685	NaN	2208.2	30	0	1479.6	0.14			+	42528	TAQQPALP	8	29	413.2267763118418	824.4389996904836	2	413.22698974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAQQPALP_	REV__ENSG00000153443|ENST00000283474|UBALD1;REV__nc|ENSG00000153443|Q8TB05-2|UBALD1	18.324413293986947	0.7971860551947066	5				NaN	NaN	0	NaN	772	2795	3568
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3578	15.707	NaN	2576.7	30	0	760.74	0.214	+			35497	SATSKTFEK	9	54	499.7617123439297	997.5088717546594	2	499.7618103027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SATSKTFEK_	ASH1L|p.H1793Ifs*7|1|0.13|ENSG00000116539|chr1:155438778-155438778|G/-|frameshift_variant;ASH1L|p.I970Lfs*9|1|0.2|ENSG00000116539|chr1:155479962-155479962|T/-|frameshift_variant;ASH1L|p.K1222Rfs*11|4|0.27|ENSG00000116539|chr1:155479205-155479205|T/-|frameshift_variant;ASH1L|p.K1533Sfs*17|1|0.25|ENSG00000116539|chr1:155478272-155478272|T/-|frameshift_variant;ASH1L|p.K2377Nfs*5|1|0.28|ENSG00000116539|chr1:155354570-155354570|T/-|frameshift_variant;ASH1L|p.N1822Tfs*2|1|0.33|ENSG00000116539|chr1:155438690-155438690|T/-|frameshift_variant;ASH1L|p.R712Efs*23|3|0.35|ENSG00000116539|chr1:155480736-155480736|T/-|frameshift_variant;ASH1L|p.S2309Ifs*11|1|0.64|ENSG00000116539|chr1:155357635-155357636|-/T|frameshift_variant;ENSG00000116539|ENST00000392403|ASH1L;nc|ENSG00000116539|Q9NR48|ASH1L	76.16968421966216	0.11411088698345859	5				NaN	NaN	0	NaN	778	2798	3577
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3579	15.71	NaN	3918.3	30	0	1504.7	0.106	+			31205	QGRLAVTTHGL	11	33	384.88778159419286	1151.6415153827786	3	385.2220153808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QGRLAVTTHGL_	ENSG00000180210|ENST00000311907|F2	25.125986553469783	0.7262400895305658	5				NaN	NaN	0	NaN	779	2798	3577
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3580	15.712	NaN	988.97	30	0	280.34	0.106				-1	STLKSIMKK	9	26	351.2108818415753	NaN	0	351.2110290527344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_STLKSIM(Oxidation (M))KK_	ENSG00000107104|ENST00000382297|KANK1;ENST00000354485.5_1_9:730997-731267:+|nuORF;ENST00000489369.5_1_9:676972-732786:+|nuORF;nc|ENSG00000107104|Q14678-2|KANK1	22.579656572578934	0.3605601358598771	5				NaN	NaN	0	NaN	780	2798	3577
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3581	15.714	NaN	1275.7	30	0	268.63	0.035	+			42346	TAHDQKTAL	9	46	492.7586520727778	NaN	0	492.7591857910156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TAHDQKTAL_	ENSG00000142875|ENST00000370685|PRKACB	60.11826168202944	0.14881452885248947	5				NaN	NaN	0	NaN	781	2798	3577
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3591	15.738	NaN	19446	30	0	3448.3	0.214	+			6334	AVTKYTSAK	9	81	484.77408761191583	967.5336222906317	2	484.7740173339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVTKYTSAK_	ENSG00000124635|ENST00000339812|H2BC11;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000234289|ENST00000599962|H2BC12L	182.3913890336628	0.0010559746847940753	5				NaN	NaN	0	NaN	788	2801	3590
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3592	15.742	NaN	7486.3	30	0	3056.9	0.037			+	37736	SLTLRLKQK	9	45	362.9045930436599	1085.6919497311796	3	362.9046630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLTLRLKQK_	REV__ENST00000491615.5_1_13:51102044-51102324:+|nuORF	58.22992032128504	0.22837015374068087	5				NaN	NaN	0	NaN	789	2801	3590
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3603	15.765	NaN	1311.8	30	0	168.5	0.144	+			16296	HEHGQLHSM	9	41	538.240384310376	1074.466215687552	2	538.2411499023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HEHGQLHSM_	ENSG00000196504|ENST00000545856|PRPF40A;nc|ENSG00000196504|O75400-2|PRPF40A;nc|ENSG00000196504|O75400-3|PRPF40A;nc|ENSG00000196504|O75400|PRPF40A	56.43379154798735	0.2433427591689151	5				NaN	NaN	0	NaN	797	2804	3602
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3612	15.787	NaN	2952.6	30	0	1028.7	0.147			+	-1	VTKMLRMIVT	10	41	408.5665250627833	1222.6777457885498	3	408.5661926269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_VTKM(Oxidation (M))LRM(Oxidation (M))IVT_	REV__sp|F5H8S6|US24_HCMVMTegumentproteinUS24OS=Humancytomegalovirus(strainMerlin)OX=295027GN=US24PE=3SV=1;REV__sp|P09700|US24_HCMVATegumentproteinUS24OS=Humancytomegalovirus(strainAD169)OX=10360GN=US24PE=3SV=3	26.063383197487333	0.6669871633831898	5				NaN	NaN	0	NaN	803	2807	3611
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3626	15.828	NaN	1246.9	30	0	131.31	0.214			+	10133	ESQKAGERAL	10	42	544.789670312268	NaN	0	544.7899169921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ESQKAGERAL_	REV__ENSG00000171865|ENST00000315212|RNASEH1	26.063383197487333	0.4145965855542893	5				NaN	NaN	0	NaN	811	2813	3625
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3627	15.831	NaN	3859.2	30	0	1451.6	0.106			+	33196	REYPLILR	8	57	530.317561861344	1058.6205707894878	2	530.3185424804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_REYPLILR_	REV__ENSG00000150347|ENST00000279873|ARID5B;REV__nc|ENSG00000150347|Q14865-2|ARID5B	40.77816245573522	0.6514838689002179	5				NaN	NaN	0	NaN	812	2813	3625
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3628	15.833	NaN	1408.3	30	0	359.79	0.106			+	-1	APVHMHHHPDF	11	27	670.8016325972849	NaN	0	670.8025512695312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_APVHM(Oxidation (M))HHHPDF_	REV__TLE4|p.R431H|1|0.29|ENSG00000106829|chr9:79709651-79709651|G/A|missense_variant	14.864876125193954	0.456735970842152	5				NaN	NaN	0	NaN	813	2813	3625
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3629	15.835	NaN	1413.7	30	0	461.05	0.035	+			49038	VVHVSTSQK	9	47	492.77685589293975	NaN	0	492.77740478515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVHVSTSQK_	ENST00000546652.6_2_12:53848615-53849765:+|nuORF	58.78195531508484	0.1545138866451181	5				NaN	NaN	0	NaN	814	2813	3625
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3639	15.859	NaN	8910.4	30	0	5761.5	0.214			+	48083	VSSVQKSRE	9	30	340.52084267572627	1018.5406986273788	3	340.52081298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSSVQKSRE_	REV__ENSG00000134352|ENST00000381298|IL6ST;REV__ENST00000503773.6_1_5:55236912-55256289:-|nuORF;REV__nc|ENSG00000134352|P40189-3|IL6ST	23.04248740728303	0.5879033540491928	5				NaN	NaN	0	NaN	821	2816	3638
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3640	15.862	NaN	1999.7	30	0	271.66	0.106	+			16061	HAYEHSLGK	9	58	521.2599597387504	1040.5053665443006	2	521.2599487304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HAYEHSLGK_	ENSG00000105355|ENST00000221957|PLIN3;nc|ENSG00000105355|O60664-2|PLIN3;nc|ENSG00000105355|O60664-3|PLIN3;nc|ENSG00000105355|O60664-4|PLIN3	60.11826168202944	0.21262886028301267	5				NaN	NaN	0	NaN	822	2816	3638
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3641	15.864	NaN	729.21	30	0	131.02	0.036			+	27867	MTIAAKRMR	9	33	539.3031616210938	NaN	0	539.3031616210938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MTIAAKRMR_	REV__ENSG00000197535|ENST00000399233|MYO5A;REV__MYO5A|p.I1440Nfs*19|1|0.44|ENSG00000197535|chr15:52336477-52336478|-/T|frameshift_variant;REV__nc|ENSG00000197535|Q9Y4I1-2|MYO5A;REV__nc|ENSG00000197535|Q9Y4I1|MYO5A	23.52269567125451	0.3573684076213556	5				NaN	NaN	0	NaN	823	2816	3638
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3651	15.886	NaN	3172.5	30	0	298.4	0.145				-1	KMRQMWNNK	9	73	626.3081945292722	1250.6018361253443	2	626.3090209960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_KMRQM(Oxidation (M))WNNK_	ADAMTSL3|p.F1172Yfs*20|1|0.12|ENSG00000156218|chr15:83983142-83983143|-/A|frameshift_variant;ADAMTSL3|p.H1300Ifs*18|1|0.33|ENSG00000156218|chr15:83991138-83991138|C/-|frameshift_variant;ADAMTSL3|p.N1166Kfs*26|1|0.4|ENSG00000156218|chr15:83983119-83983120|-/A|frameshift_variant;ADAMTSL3|p.R1207Gfs*32|1|0.3|ENSG00000156218|chr15:83983243-83983243|A/-|frameshift_variant;ENSG00000156218|ENST00000286744|ADAMTSL3;ENST00000561483.5_1_15:84323016-84694242:+|nuORF;nc|ENSG00000156218|P82987-2|ADAMTSL3	60.97194046774394	0.20551255781574032	5				NaN	NaN	0	NaN	830	2819	3650
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3657	15.903	NaN	4229.9	30	0	764.12	0.215			+	7395	DEDVLDRHQ	9	64	563.7602488702654	1125.5059448073307	2	563.7606811523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DEDVLDRHQ_	REV__USP53|p.R476Q|1|0.3|ENSG00000145390|chr4:119269829-119269829|G/A|missense_variant	20.94693142431847	0.6074874384046576	5				NaN	NaN	0	NaN	833	2822	3656
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3658	15.906	NaN	1677.9	30	0	326.88	0.106	+			12963	GETESKRAL	9	48	495.7643279830238	989.5141030328476	2	495.7640686035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GETESKRAL_	ENSG00000197321|ENST00000355867|SVIL;nc|ENSG00000197321|O95425-2|SVIL;nc|ENSG00000197321|O95425-3|SVIL;nc|ENSG00000197321|O95425-4|SVIL;SVIL|p.M1863Dfs*18|1|0.28|ENSG00000197321|chr10:29471186-29471187|-/C|frameshift_variant;SVIL|p.M1863Wfs*44|8|0.39|ENSG00000197321|chr10:29471187-29471187|C/-|frameshift_variant;SVIL|p.N2095Kfs*36|1|0.25|ENSG00000197321|chr10:29462394-29462395|-/T|frameshift_variant	40.77816245573522	0.41113185337114944	5				NaN	NaN	0	NaN	834	2822	3656
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3659	15.908	NaN	3554.8	30	0	503.46	0.106	+			7343	DAWKTQKTL	9	42	364.2013796353675	1089.5823095063026	3	364.20135498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DAWKTQKTL_	ENST00000489973.6_1_13:111545392-111545482:-|nuORF	37.15910966729921	0.4535818937225704	5				NaN	NaN	0	NaN	835	2822	3656
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3660	15.91	NaN	1452.1	30	0	281.31	0.106	+			7472	DGAQIAKV	8	38	401.2272570028685	NaN	0	401.227294921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DGAQIAKV_	ENSG00000145681|ENST00000274341|HAPLN1	31.954861631926434	1.7418937515398478	5				NaN	NaN	0	NaN	836	2822	3656
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3661	15.912	NaN	2334.5	30	0	361.27	0.038			+	-1	DMSKFFYKA	9	41	384.8503503900075	NaN	0	384.5159912109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_DM(Oxidation (M))SKFFYKA_	REV__DVL2|p.A601Qfs*80|1|0.48|ENSG00000004975|chr17:7226275-7226275|C/-|frameshift_variant;REV__ENSG00000004975|ENST00000005340|DVL2;REV__ENST00000572285.5_1_17:7133284-7137536:-|nuORF;REV__ENST00000576949.1_1_17:7133875-7137617:-|nuORF	31.529811441608018	0.3183796599642538	5				NaN	NaN	0	NaN	837	2822	3656
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3670	15.932	NaN	823.67	30	0	355.57	0.145			+	36872	SIFYDSTYR	9	25	576.2711791992188	NaN	0	576.2711791992188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIFYDSTYR_	REV__ENSG00000134954|ENST00000392668|ETS1;REV__ETS1|p.N203Rfs*56|1|0.07|ENSG00000134954|chr11:128484945-128484946|-/ATTTCTTC|frameshift_variant;REV__nc|ENSG00000134954|P14921-2|ETS1;REV__nc|ENSG00000134954|P14921-5|ETS1;REV__nc|ENSG00000134954|P14921|ETS1	14.864876125193954	0.3866709117995958	5				NaN	NaN	0	NaN	843	2825	3669
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3681	15.958	NaN	11278	30	0	2896.7	0.214	+			22933	KVQDVKKTIQK	11	57	438.9421353408273	1313.804576622682	3	439.2760314941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVQDVKKTIQK_	ENSG00000133706|ENST00000394434|LARS1;ENST00000508667.5_1_5:145522961-145531505:-|nuORF;nc|ENSG00000133706|Q9P2J5-2|LARS1	74.1650062923329	0.2010173757047072	5				NaN	NaN	0	NaN	851	2828	3680
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3682	15.961	NaN	8346.9	30	0	1301.4	0.106	+			34189	RTCWETTKK	9	79	403.8731479727253	1208.5976145183758	3	403.8731384277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_RTC(Carbamidomethyl (C))WETTKK_	ENST00000504956.5_1_4:87869676-87967907:+|nuORF;ENST00000511442.1_2_4:87869713-87967910:+|nuORF	105.16503226865211	0.03393154504579365	5				NaN	NaN	0	NaN	852	2828	3680
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3683	15.963	NaN	2325.9	30	0	365.13	0.106	+			34190	RTCWETTKK	9	58	605.3064780709905	1208.5984032087808	2	605.3065185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_RTC(Carbamidomethyl (C))WETTKK_	ENST00000504956.5_1_4:87869676-87967907:+|nuORF;ENST00000511442.1_2_4:87869713-87967910:+|nuORF	67.49366992349736	0.1516260258713357	5				NaN	NaN	0	NaN	853	2828	3680
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3684	15.965	NaN	953.98	30	0	266.97	0.037	+			30975	QEQTFQLLK	9	38	567.8139385252235	NaN	0	567.8134155273438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QEQTFQLLK_	ENSG00000164761|ENST00000297350|TNFRSF11B	40.77816245573522	0.2702456086868081	5				NaN	NaN	0	NaN	854	2828	3680
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3692	15.983	NaN	1073.2	30	0	85.371	0.214			+	1130	AELSARVKQ	9	53	501.2904520775261	1000.5663512218522	2	501.2910461425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AELSARVKQ_	REV__ENSG00000160401|ENST00000373295|CFAP157;REV__nc|ENSG00000160401|Q5JU67-2|CFAP157	48.601550744091256	0.3193666407755445	5				NaN	NaN	0	NaN	859	2831	3691
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3693	15.987	NaN	3047	30	0	587.31	0.034	+			29203	NVNEPATTK	9	64	487.2512017360788	972.4878505389577	2	487.2508544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NVNEPATTK_	ENSG00000116906|ENST00000366647|GNPAT;nc|ENSG00000116906|O15228-2|GNPAT	70.8162118820467	0.13725933411854815	5				NaN	NaN	0	NaN	860	2831	3691
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3703	16.009	NaN	3199.6	30	0	284.53	0.214			+	25886	LSGAQTAVTT	10	59	474.7533514085142	947.4921498838285	2	474.75360107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSGAQTAVTT_	REV__ENSG00000136931|ENST00000373588|NR5A1	71.87747018426188	0.26198133118427214	5				NaN	NaN	0	NaN	867	2834	3702
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3704	16.013	NaN	4708.3	30	0	1184	0.106				-1	RVMKALVNR	9	45	368.22279066871425	NaN	0	368.2221374511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_RVM(Oxidation (M))KALVNR_	ENSG00000149136|ENST00000278412|SSRP1;ENST00000293880.9_1_11:57098199-57100416:-|nuORF	33.921630207806714	0.3063038642147651	5				NaN	NaN	0	NaN	868	2834	3702
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3705	16.015	NaN	2261.8	30	0	1262.4	0.106	+			19019	IWIDKILTT	9	44	551.8297697381637	1101.6449865431273	2	551.8306274414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IWIDKILTT_	ENSG00000125257|ENST00000645237|ABCC4;nc|ENSG00000125257|O15439-2|ABCC4	17.364965105453717	0.6112419832031293	5				NaN	NaN	0	NaN	869	2834	3702
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3706	16.016	NaN	2291	30	0	396.99	0.106			+	4932	ATQPGQPPSAG	11	49	505.7485752561636	1009.4825975791272	2	505.74957275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATQPGQPPSAG_	REV__ENST00000467438.1_1_1:87597663-87598596:+|nuORF	58.22992032128504	0.3392555181951113	5				NaN	NaN	0	NaN	870	2834	3702
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3707	16.018	NaN	1414.1	30	0	310.32	0.106			+	9842	EPQRALGAP	9	38	469.7564392089844	NaN	0	469.7564392089844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EPQRALGAP_	REV__nc|ENSG00000132781|Q9UIF7-4|MUTYH;REV__nc|ENSG00000132781|Q9UIF7|MUTYH	60.97194046774394	0.14517358171632622	5				NaN	NaN	0	NaN	871	2834	3702
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3708	16.02	NaN	1291.7	30	0	141.88	0.034	+			35332	SANTNTVPK	9	42	466.24580071412953	930.4770484950591	2	466.24658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SANTNTVPK_	ENSG00000165417|ENST00000553612|GTF2A1	65.46538089061403	0.16805504838372562	5				NaN	NaN	0	NaN	872	2834	3702
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3722	16.05	NaN	36259	30	0	12960	0.214	+			41865	SVTGSAVSK	9	56	418.22948624356656	834.4444195539331	2	418.2294616699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVTGSAVSK_	ENSG00000073921|ENST00000393346|PICALM;nc|ENSG00000073921|Q13492-2|PICALM;nc|ENSG00000073921|Q13492-3|PICALM;nc|ENSG00000073921|Q13492-5|PICALM;PICALM|p.L275Gfs*3|1|0.14|ENSG00000073921|chr11:86003436-86003437|-/TTCC|frameshift_variant	120.30596017624542	0.02101454110788768	5				NaN	NaN	0	NaN	883	2837	3721
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3723	16.053	NaN	588.02	30	0	180.41	0.106	+			22413	KTKKQNLE	8	29	494.7926940917969	NaN	0	494.7926940917969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTKKQNLE_	ENSG00000187889|ENST00000343433|FYB2	24.519189625965996	1.7418937515398478	5				NaN	NaN	0	NaN	884	2837	3721
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3724	16.055	NaN	20043	30	0	6299.9	0.106	+			48875	VVDAKTLKK	9	61	334.54983953929536	1000.6276892180861	3	334.5498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVDAKTLKK_	ENSG00000079246|ENST00000392132|XRCC5;ENST00000493706.1_1_2:216990646-216992426:+|nuORF;XRCC5|p.E287Kfs*11|2|0.25|ENSG00000079246|chr2:216127589-216127589|A/-|frameshift_variant;XRCC5|p.Q488Rfs*29|1|0.06|ENSG00000079246|chr2:216141305-216141305|C/-|frameshift_variant	47.657333605630114	0.33044192980041115	5				NaN	NaN	0	NaN	885	2837	3721
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3725	16.057	NaN	2027.8	30	0	942.32	0.106	+			2245	ALTKELNACR	10	48	559.8025601610898	1117.5905673889795	2	559.8034057617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ALTKELNACR_	ENSG00000139220|ENST00000549396|PPFIA2;nc|ENSG00000139220|O75334-2|PPFIA2;nc|ENSG00000139220|O75334-3|PPFIA2;nc|ENSG00000139220|O75334-4|PPFIA2;nc|ENSG00000139220|O75334-5|PPFIA2;nc|ENSG00000139220|O75334-6|PPFIA2;PPFIA2|p.F632Lfs*18|1|0.39|ENSG00000139220|chr12:81353217-81353217|A/-|frameshift_variant;PPFIA2|p.H786Lfs*48|1|0.16|ENSG00000139220|chr12:81341113-81341116|GTGA/-|frameshift_variant	42.86426827375447	0.522752283233888	5				NaN	NaN	0	NaN	886	2837	3721
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3726	16.059	NaN	1073.1	30	0	235.86	0.106			+	24955	LLAKVKATK	9	44	486.3339538574219	NaN	0	486.3339538574219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LLAKVKATK_	REV__ENSG00000184313|ENST00000421030|MROH7;REV__MROH7|p.R1167Efs*23|1|0.13|ENSG00000184313|chr1:54702676-54702676|A/-|frameshift_variant;REV__nc|ENSG00000184313|Q68CQ1-1|MROH7;REV__nc|ENSG00000184313|Q68CQ1-9|MROH7	26.69291269510374	0.34280015626154364	5				NaN	NaN	0	NaN	887	2837	3721
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3727	16.061	NaN	837.27	30	0	171.42	0.036				-1	RDRDGYIGC	9	25	556.2506103515625	NaN	0	556.2506103515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_RDRDGYIGC(Carbamidomethyl (C))_	ENSG00000167791|ENST00000294288|CABP2;nc|ENSG00000167791|Q9NPB3-2|CABP2	12.959181472943097	0.3931207604263714	5				NaN	NaN	0	NaN	888	2837	3721
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3728	16.061	NaN	1654.6	30	0	303.82	0.14			+	42799	TEANAPPR	8	32	428.219578106076	854.4246032789521	2	428.2195129394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TEANAPPR_	REV__ENSG00000101596|ENST00000320876|SMCHD1;REV__ENST00000584897.5_1_18:2726458-2784452:+|nuORF;REV__nc|ENSG00000101596|A6NHR9-2|SMCHD1;REV__nc|ENSG00000101596|A6NHR9-3|SMCHD1	34.172542307311794	0.6954784234644539	5				NaN	NaN	0	NaN	889	2837	3721
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3742	16.092	NaN	4106	30	0	684.44	0.143	+			22952	KVQSKVNLK	9	64	522.3321226149374	1042.6496922966746	2	522.3327026367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVQSKVNLK_	DYNC1H1|p.F2635Lfs*67|1|0.16|ENSG00000197102|chr14:102017141-102017141|T/-|frameshift_variant;DYNC1H1|p.G1902Vfs*27|2|0.27|ENSG00000197102|chr14:102006154-102006154|G/-|frameshift_variant;DYNC1H1|p.K3112Hfs*3|1|0.31|ENSG00000197102|chr14:102027998-102027999|-/TCACAAG|frameshift_variant;DYNC1H1|p.W4201Gfs*43|1|0.42|ENSG00000197102|chr14:102043958-102043958|G/-|frameshift_variant;ENSG00000197102|ENST00000360184|DYNC1H1	158.07458414430337	0.004987072822166904	5				NaN	NaN	0	NaN	900	2840	3741
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3749	16.11	NaN	2489.1	30	0	230.63	0.214			+	21746	KQNEKVAQ	8	58	472.7616228467328	943.5086927602656	2	472.7617492675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KQNEKVAQ_	REV__ENSG00000131504|ENST00000389054|DIAPH1;REV__nc|ENSG00000131504|O60610-2|DIAPH1;REV__nc|ENSG00000131504|O60610-3|DIAPH1	69.6276240434122	0.4100012001731381	5				NaN	NaN	0	NaN	904	2843	3748
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3750	16.114	NaN	2491	30	0	621.91	0.106	+			9769	ENNDQRLAV	9	42	529.7650329897477	1057.5155130462954	2	529.7657470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ENNDQRLAV_	ENSG00000082512|ENST00000261464|TRAF5;nc|ENSG00000082512|O00463-2|TRAF5;nc|ENSG00000082512|O00463-3|TRAF5	62.107414245175825	0.1960472003779324	5				NaN	NaN	0	NaN	905	2843	3748
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3751	16.116	NaN	5290.7	30	0	1022.4	0.106	+			44988	TVDEKNYTK	9	71	549.2768556461601	1096.5391583591202	2	549.2777709960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVDEKNYTK_	ENSG00000182551|ENST00000327435|ADI1;nc|ENSG00000182551|Q9BV57-2|ADI1	101.45984612302182	0.0377122763612125	5				NaN	NaN	0	NaN	906	2843	3748
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3752	16.118	NaN	2268.6	30	0	891.14	0.106	+			39635	STIDPSSVMVL	11	31	383.5347008431538	1147.5822731296614	3	383.5345153808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STIDPSSVMVL_	ENSG00000206072|ENST00000544088|SERPINB11;SERPINB11|p.R288Pfs*5|1|0.4|ENSG00000206072|chr18:63723077-63723078|-/C|frameshift_variant	38.753607047826485	0.5749975102143227	5				NaN	NaN	0	NaN	907	2843	3748
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3753	16.12	NaN	1230.8	30	0	588.47	0.032			+	17230	HVLAPTST	8	38	413.2267763118418	824.4389996904836	2	413.2271728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HVLAPTST_	REV__ENSG00000103742|ENST00000352385|IGDCC4;REV__ENST00000559327.1_1_15:65676349-65688574:-|nuORF;REV__IGDCC4|p.G997Rfs*74|1|0.33|ENSG00000103742|chr15:65386022-65386023|-/CG|frameshift_variant;REV__IGDCC4|p.L859*|1|0.23|ENSG00000103742|chr15:65388940-65388940|G/-|frameshift_variant;REV__IGDCC4|p.T872Qfs*11|3|0.3|ENSG00000103742|chr15:65388902-65388902|G/-|frameshift_variant;REV__nc|ENSG00000103742|Q8TDY8-2|IGDCC4	21.70233525837049	0.7917639344264583	5				NaN	NaN	0	NaN	908	2843	3748
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3762	16.14	NaN	47029	30	0	15145	0.214	+			44989	TVDEKNYTK	9	89	366.5205344781052	1096.5397740345156	3	366.5203552246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVDEKNYTK_	ENSG00000182551|ENST00000327435|ADI1;nc|ENSG00000182551|Q9BV57-2|ADI1	60.11826168202944	0.21262886028301267	5				NaN	NaN	0	NaN	914	2846	3761
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3763	16.143	NaN	11029	30	0	4138.5	0.106			+	-1	STPVMKSIYM	10	52	391.5278959651479	1171.5618584956437	3	391.5279235839844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_STPVMKSIYM(Oxidation (M))_	REV__ENSG00000167658|ENST00000309311|EEF2	27.047317107675042	0.6589519614906109	5				NaN	NaN	0	NaN	915	2846	3761
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3764	16.145	NaN	1547.8	30	0	640.23	0.106				-1	 	0	37	407.23800269123296	812.461452449266	2	407.2380676269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	916	2846	3761
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3765	16.147	NaN	1866.5	30	0	136.51	0.106	+			13768	GQGESLRVK	9	53	487.274778403545	NaN	0	487.274658203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GQGESLRVK_	ENSG00000147697|ENST00000276708|GSDMC	49.44154591367651	0.21054156626303966	5				NaN	NaN	0	NaN	917	2846	3761
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3766	16.149	NaN	964.74	30	0	143.89	0.036	+			21895	KRRIRAKQ	8	45	528.3505106885058	1054.6864684438115	2	528.3507690429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KRRIRAKQ_	ENSG00000167971|ENST00000343516|CASKIN1	65.80317337860623	0.44433089765398776	5				NaN	NaN	0	NaN	918	2846	3761
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3779	16.176	NaN	10747	30	0	4992.6	0.214	+			6459	AVYGQKEIHRK	11	60	443.5856621937515	NaN	0	443.585693359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVYGQKEIHRK_	ENSG00000145907|ENST00000356245|G3BP1;ENST00000413279.1_1_2:136269117-136269381:-|nuORF;ENST00000519832.1_1_5:151166169-151170647:+|nuORF;nc|ENSG00000145907|Q13283-2|G3BP1	24.519189625965996	0.45614437233802635	5				NaN	NaN	0	NaN	928	2849	3778
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3780	16.18	NaN	4085.7	30	0	660.8	0.106	+			357	AAQKNMALK	9	66	487.7758610974517	973.5371692617034	2	487.77587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAQKNMALK_	ENSG00000100345|ENST00000216181|MYH9;SYNDIG1-MYH9|1|fusion	116.90359126533652	0.02307425081617795	5				NaN	NaN	0	NaN	929	2849	3778
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3781	16.182	NaN	9804.5	30	0	4573.1	0.106			+	-1	AEVMALGMLI	10	40	360.5207397408358	1078.5403898227073	3	360.520751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Oxidation (M)	_AEVM(Oxidation (M))ALGM(Oxidation (M))LI_	REV__ADCY3|p.V415Cfs*27|1|0.38|ENSG00000138031|chr2:24839985-24839985|C/-|frameshift_variant;REV__ENSG00000138031|ENST00000679454|ADCY3	22.579656572578934	0.6954366826851017	5				NaN	NaN	0	NaN	930	2849	3778
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3782	16.183	NaN	2747.4	30	0	260.28	0.106	+			42970	TEKEGKDQEL	10	62	588.7902202479708	1175.5658875627414	2	588.7909545898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TEKEGKDQEL_	ENSG00000137497|ENST00000393695|NUMA1;nc|ENSG00000137497|Q14980-2|NUMA1;nc|ENSG00000137497|Q14980-3|NUMA1;nc|ENSG00000137497|Q14980-4|NUMA1;NUMA1|p.A1067S|1|0.25|ENSG00000137497|chr11:72014304-72014304|C/A|missense_variant;NUMA1|p.K1766Rfs*2|1|0.39|ENSG00000137497|chr11:72007357-72007357|G/-|frameshift_variant;NUMA1|p.L1786Pfs*18|1|0.23|ENSG00000137497|chr11:72007295-72007296|-/G|frameshift_variant	114.85826248499774	0.03459167991829056	5				NaN	NaN	0	NaN	931	2849	3778
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3783	16.185	NaN	3213.7	30	0	273.59	0.106			+	21132	KKSLQHNEK	9	65	556.3141663193518	1110.6137797055035	2	556.314697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KKSLQHNEK_	REV__CCDC88C|p.K1383Sfs*29|1|0.08|ENSG00000015133|chr14:91291049-91291049|T/-|frameshift_variant;REV__ENSG00000015133|ENST00000389857|CCDC88C	64.20726635412375	0.17854274437659667	5				NaN	NaN	0	NaN	932	2849	3778
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3784	16.187	NaN	1181.8	30	0	165.33	0.106	+			50812	YERSLGGQ	8	38	455.2244320796788	908.4343112261577	2	455.2246398925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YERSLGGQ_	ENSG00000144711|ENST00000613206|IQSEC1;nc|ENSG00000144711|Q6DN90-2|IQSEC1;nc|ENSG00000144711|Q6DN90|IQSEC1	37.15910966729921	0.6739408393984688	5				NaN	NaN	0	NaN	933	2849	3778
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3785	16.189	NaN	843.62	30	0	156.37	0.033			+	18191	IMFSVRSYDLD	11	36	449.218994140625	NaN	0	449.218994140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IMFSVRSYDLD_	REV__nc|ENSG00000119508|Q92570-2|NR4A3	26.063383197487333	0.44926255568796863	5				NaN	NaN	0	NaN	934	2849	3778
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3797	16.214	NaN	13617	30	0	3443.2	0.214	+			5259	ATVDKTVCK	9	72	482.75997074656385	963.5053885599277	2	482.75982666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATVDKTVCK_	ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1670Tfs*23|1|0.29|ENSG00000174231|chr17:1659487-1659487|C/-|frameshift_variant	152.06079943815163	0.00638878961959199	5				NaN	NaN	0	NaN	943	2852	3796
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3798	16.218	NaN	1803.2	30	0	343.52	0.106	+			12064	GAAGPVCSK	9	42	395.19971746657944	788.3848819999589	2	395.19964599609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GAAGPVCSK_	ENST00000395863.7_1_20:55841273-55841597:-|nuORF	56.72105179125745	0.24094814563026265	5				NaN	NaN	0	NaN	944	2852	3796
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3799	16.22	NaN	802.44	30	0	94.746	0.106				-1	KNKLECSR	8	44	517.7727693310691	NaN	0	517.7732543945312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_KNKLEC(Carbamidomethyl (C))SR_	tr|U7T063|U7T063_FUSNURibonucleasePproteincomponentOS=FusobacteriumnucleatumCTI-5OX=1316586GN=rnpAPE=3SV=1	38.80614096846853	1.7418937515398478	5				NaN	NaN	0	NaN	945	2852	3796
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3800	16.222	NaN	2284.1	30	0	320.54	0.035	+			36130	SEKRENVM	8	53	496.74467075549563	991.4747885777913	2	496.744384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SEKRENVM_	ENSG00000140526|ENST00000352732|ABHD2	68.78682469695295	0.41700713582915416	5				NaN	NaN	0	NaN	946	2852	3796
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3814	16.251	NaN	3459.7	30	0	447.7	0.214	+			36133	SEKRKQISV	9	52	537.8169257461956	1073.619298559191	2	537.8172607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEKRKQISV_	ENSG00000100994|ENST00000216962|PYGB;PYGB-C20orf152|1|fusion;PYGB-C20orf152|2|fusion;PYGB|p.T677Kfs*4|1|0.44|ENSG00000100994|chr20:25292466-25292466|C/-|frameshift_variant	66.96192283764107	0.15557981141143568	5				NaN	NaN	0	NaN	957	2855	3813
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3815	16.255	NaN	1766.1	30	0	1202.3	0.035			+	13131	GGLVSTGKTVV	11	40	509.3007084297565	1016.5868639263131	2	509.3000183105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GGLVSTGKTVV_	REV__chr12:56104796-56106588|270|17.72|0.0|20.76|+|1|None,PA2G4|1	32.75053402867276	0.6462648045997152	5				NaN	NaN	0	NaN	958	2855	3813
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3826	16.28	NaN	4458.6	30	0	791.68	0.214	+			49879	VYTKKTTKL	9	50	361.2251538930496	NaN	0	361.22528076171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYTKKTTKL_	ENSG00000148396|ENST00000684901|SEC16A;nc|ENSG00000148396|O15027-2|SEC16A;nc|ENSG00000148396|O15027-3|SEC16A;nc|ENSG00000148396|O15027-4|SEC16A;nc|ENSG00000148396|O15027-5|SEC16A;SEC16A|p.P2155Hfs*25|1|0.25|ENSG00000148396|chr9:136447664-136447664|G/-|frameshift_variant	31.634271133179894	0.31785226469614103	5				NaN	NaN	0	NaN	966	2858	3825
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3827	16.284	NaN	1683.5	30	0	267.99	0.106	+			1478	AFLVRVPSSV	10	33	358.88031005859375	NaN	0	358.88031005859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AFLVRVPSSV_	ENSG00000042813|ENST00000046087|ZPBP;nc|ENSG00000042813|Q9BS86-2|ZPBP	44.377184641726394	0.34115073642966565	5				NaN	NaN	0	NaN	967	2858	3825
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3828	16.286	NaN	2843.8	30	0	413.62	0.106			+	43684	TKFFDLKAK	9	45	366.54844904155954	1096.6235177248786	3	366.8831481933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TKFFDLKAK_	REV__ENSG00000104365|ENST00000520810|IKBKB;REV__ENST00000342222.6_1_8:42151073-42188494:+|nuORF;REV__ENST00000517917.5_1_8:42128977-42177019:+|nuORF;REV__ENST00000520201.5_1_8:42129679-42177019:+|nuORF;REV__ENST00000522785.1_1_8:42176239-42177326:+|nuORF;REV__IKBKB|p.G558Efs*6|1|0.35|ENSG00000104365|chr8:42320824-42320824|G/-|frameshift_variant;REV__nc|ENSG00000104365|O14920-2|IKBKB;REV__nc|ENSG00000104365|O14920-4|IKBKB	25.57405402267927	0.5642445186134241	5				NaN	NaN	0	NaN	968	2858	3825
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3829	16.287	NaN	813.16	30	0	163.45	0.106			+	29572	PFFYMPNK	8	38	522.2540893554688	NaN	0	522.2540893554688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PFFYMPNK_	REV__ENSG00000115290|ENST00000263915|GRB14;REV__ENST00000469573.1_1_2:165365242-165383622:-|nuORF;REV__ENST00000488342.5_1_2:165365032-165477819:-|nuORF;REV__GRB14|p.E402Rfs*18|1|0.29|ENSG00000115290|chr2:164497391-164497392|-/T|frameshift_variant;REV__nc|ENSG00000115290|Q14449-2|GRB14	24.504012794735996	1.7418937515398478	5				NaN	NaN	0	NaN	969	2858	3825
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3830	16.289	NaN	3245.2	30	0	448.56	0.036			+	30645	QATDTIGEKV	10	69	531.2782470485239	1060.5419411638477	2	531.7783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QATDTIGEKV_	REV__ENSG00000066739|ENST00000359933|ATG2B	69.6276240434122	0.2803623802747859	5				NaN	NaN	0	NaN	970	2858	3825
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3844	16.319	NaN	3087.1	30	0	373.22	0.214	+			39273	STAQRVTYK	9	64	527.2884748978584	NaN	0	527.28857421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STAQRVTYK_	ENSG00000126226|ENST00000337344|PCID2;nc|ENSG00000126226|Q5JVF3-2|PCID2;nc|ENSG00000126226|Q5JVF3-3|PCID2;nc|ENSG00000126226|Q5JVF3-4|PCID2	68.84614121027924	0.11159004992091766	5				NaN	NaN	0	NaN	981	2861	3843
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3845	16.323	NaN	1132.3	30	0	227.65	0.106	+			22665	KTYIPPKGETK	11	43	631.3617966736599	1260.7090404141197	2	631.3623657226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTYIPPKGETK_	ENSG00000189403|ENST00000341423|HMGB1;ENST00000559968.1_1_14:68082236-68082464:+|nuORF;nc|ENSG00000124097|B2RPK0|HMGB1P1	63.69406221917213	0.2904805327065929	5				NaN	NaN	0	NaN	982	2861	3843
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3846	16.324	NaN	1671.8	30	0	491.62	0.036			+	29860	PLERGAGPHQ	10	43	354.5213928222656	NaN	0	354.5213928222656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PLERGAGPHQ_	REV__ENSG00000130589|ENST00000467148|HELZ2;REV__HELZ2|p.G2213Vfs*22|1|0.14|ENSG00000130589|chr20:63561876-63561876|C/-|frameshift_variant;REV__HELZ2|p.R2206Vfs*29|2|0.28|ENSG00000130589|chr20:63561898-63561898|G/-|frameshift_variant;REV__nc|ENSG00000130589|Q9BYK8-2|HELZ2;REV__nc|ENSG00000130589|Q9BYK8|HELZ2	27.882242232435846	0.4086243523356342	5				NaN	NaN	0	NaN	983	2861	3843
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3863	16.36	NaN	16293	30	0	11573	0.214	+			292	AAPEGKRSL	9	54	464.7639887327115	927.513424532223	2	464.76446533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAPEGKRSL_	ENSG00000255302|ENST00000530028|EID1	56.43379154798735	0.2433427591689151	5				NaN	NaN	0	NaN	997	2864	3862
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3864	16.363	NaN	7343.9	30	0	935.54	0.106			+	11485	FPAGTTIGAPK	11	77	530.2936605304254	1058.5727681276508	2	530.2947387695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FPAGTTIGAPK_	REV__ENSG00000163625|ENST00000295888|WDFY3;REV__ENST00000426414.6_1_4:85730999-85781744:-|nuORF;REV__nc|ENSG00000163625|Q8IZQ1-2|WDFY3;REV__WDFY3|p.L1060Cfs*41|1|0.4|ENSG00000163625|chr4:84794968-84794968|A/-|frameshift_variant;REV__WDFY3|p.L1842Yfs*10|1|0.19|ENSG00000163625|chr4:84755300-84755300|A/-|frameshift_variant;REV__WDFY3|p.L362Yfs*17|1|0.35|ENSG00000163625|chr4:84826853-84826853|A/-|frameshift_variant;REV__WDFY3|p.N1207Tfs*16|1|0.37|ENSG00000163625|chr4:84789775-84789775|T/-|frameshift_variant	71.87747018426188	0.2200878389444539	5				NaN	NaN	0	NaN	998	2864	3862
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3865	16.365	NaN	4139.4	30	0	779.74	0.106	+			340	AAQAHTREL	9	55	498.7651393240895	NaN	0	498.76544189453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AAQAHTREL_	ENSG00000103549|ENST00000324685|RNF40;ENST00000493683.5_1_16:30773821-30780773:+|nuORF;nc|ENSG00000103549|O75150-3|RNF40;nc|ENSG00000103549|O75150-4|RNF40	76.16968421966216	0.08450868013726211	5				NaN	NaN	0	NaN	999	2864	3862
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3866	16.367	NaN	1121.4	30	0	288.43	0.106	+			48641	VTSMSTQTK	9	33	491.7476325456864	NaN	0	491.7476806640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTSMSTQTK_	ENSG00000083937|ENST00000263780|CHMP2B;nc|ENSG00000083937|Q9UQN3-2|CHMP2B	37.50817390946774	0.28819615062043347	5				NaN	NaN	0	NaN	1000	2864	3862
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3867	16.369	NaN	2931.2	30	0	1713.7	0.106				-1	VSYEIKDMCIK	11	43	467.8969598915237	1400.669050274771	3	467.89703369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C),Oxidation (M)	_VSYEIKDM(Oxidation (M))C(Carbamidomethyl (C))IK_	ENSG00000206530|ENST00000393845|CFAP44;nc|ENSG00000206530|Q96MT7-1|CFAP44	20.030474535948922	0.7766990143561855	5				NaN	NaN	0	NaN	1001	2864	3862
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3868	16.37	NaN	588.49	30	0	124.42	0.036	+			9291	EHPETRAAVA	10	36	540.7760009765625	NaN	0	540.7760009765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EHPETRAAVA_	ENST00000296861.2_1_6:47277360-47277606:-|nuORF	42.396135135203025	0.3536752194735987	5				NaN	NaN	0	NaN	1002	2864	3862
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3869	16.371	NaN	1849.2	30	0	479.78	0.145			+	17512	IDKKRRRK	8	41	367.24468994140625	NaN	0	367.24468994140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IDKKRRRK_	REV__ENSG00000167210|ENST00000642948|LOXHD1;REV__LOXHD1|p.E34Sfs*64|1|0.27|ENSG00000167210|chr18:46656934-46656934|C/-|frameshift_variant;REV__LOXHD1|p.K601Rfs*17|1|0.18|ENSG00000167210|chr18:46579637-46579637|T/-|frameshift_variant;REV__nc|ENSG00000167210|Q8IVV2|LOXHD1	21.9598887501803	1.7418937515398478	5				NaN	NaN	0	NaN	1003	2864	3862
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3877	16.391	NaN	2027.9	30	0	171.1	0.214	+			41879	SVTKTALNK	9	58	481.2874775925769	960.5604022519539	2	481.2874755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVTKTALNK_	ENSG00000187164|ENST00000355371|SHTN1;nc|ENSG00000187164|A0MZ66-3|SHTN1;nc|ENSG00000187164|A0MZ66-4|SHTN1;nc|ENSG00000187164|A0MZ66-5|SHTN1;nc|ENSG00000187164|A0MZ66-6|SHTN1;nc|ENSG00000187164|A0MZ66-7|SHTN1;nc|ENSG00000187164|A0MZ66-8|SHTN1	67.49366992349736	0.1516260258713357	5				NaN	NaN	0	NaN	1008	2867	3876
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3878	16.395	NaN	1198.4	30	0	177.72	0.106	+			26303	LSVKFVLPV	9	40	334.5499572753906	NaN	0	334.5499572753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSVKFVLPV_	ENST00000369758.8_1_20:62904962-62905025:+|nuORF	27.882242232435846	0.3367954786602879	5				NaN	NaN	0	NaN	1009	2867	3876
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3879	16.397	NaN	471.66	30	0	43.718	0.036	+			42654	TAVKHEQEY	9	41	552.7706909179688	NaN	0	552.7706909179688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TAVKHEQEY_	ENSG00000086598|ENST00000262225|TMED2	76.16968421966216	0.08450868013726211	5				NaN	NaN	0	NaN	1010	2867	3876
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3891	16.424	NaN	2707.5	30	0	398.7	0.214	+			21030	KKKGWREK	8	63	530.3241882129719	1058.6338234927437	2	530.324951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KKKGWREK_	ENST00000360264.7_1_7:101898640-101898772:+|nuORF	63.30626980617807	0.4690498839812213	5				NaN	NaN	0	NaN	1019	2870	3890
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3892	16.427	NaN	3937	30	0	1132.2	0.106	+			14509	GTDEHVVCK	9	58	494.23193075447324	986.4493085757465	2	494.23199462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTDEHVVCK_	nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM	118.74307786436346	0.02196067127630568	5				NaN	NaN	0	NaN	1020	2870	3890
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3893	16.429	NaN	6471.5	30	0	1585	0.106	+			36666	SGMGSTVSK	9	59	427.20766175685515	852.4007705805103	2	427.2080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SGMGSTVSK_	ENSG00000132383|ENST00000254719|RPA1;RPA1|p.N274Mfs*5|1|0.18|ENSG00000132383|chr17:1879272-1879272|A/-|frameshift_variant	89.02883481214508	0.06760336634167786	5				NaN	NaN	0	NaN	1021	2870	3890
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3894	16.431	NaN	2275.5	30	0	337.49	0.106	+			41845	SVSTQQPPK	9	44	486.26144131862264	970.5083297040453	2	486.2609558105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVSTQQPPK_	ENSG00000145012|ENST00000617246|LPP;LPP|p.C364Lfs*29|1|0.29|ENSG00000145012|chr3:188609815-188609816|-/C|frameshift_variant	118.74307786436346	0.02196067127630568	5				NaN	NaN	0	NaN	1022	2870	3890
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3895	16.433	NaN	1278.2	30	0	361.89	0.106			+	-1	LVPEWSMLS	9	34	359.84673862531736	NaN	0	359.8467712402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_LVPEWSM(Oxidation (M))LS_	REV__ENST00000178638.7_1_15:63616693-63616855:-|nuORF	32.81241826257853	0.3119040447479903	5				NaN	NaN	0	NaN	1023	2870	3890
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3896	16.435	NaN	2181	30	0	216.51	0.034	+			20691	KGPGSTKEL	9	55	458.7584603497756	915.5023677663512	2	458.7583923339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KGPGSTKEL_	ENSG00000113141|ENST00000417647|IK;ENST00000515015.1_1_5:140038902-140040409:+|nuORF	54.722347961057174	0.257609425301511	5				NaN	NaN	0	NaN	1024	2870	3890
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3897	16.435	NaN	1238	30	0	209.72	0.139	+			24678	LGWLCPQA	8	36	444.22712647713627	886.4397000210726	2	444.72802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LGWLCPQA_	TNXB|p.R862C|1|0.23|ENSG00000168477|chr6:32088980-32088980|G/A|missense_variant	39.021493756699265	0.6623843612266921	5				NaN	NaN	0	NaN	1025	2870	3890
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3907	16.459	NaN	17032	30	0	5318.7	0.214	+			38877	SSNSYAIKK	9	63	333.181881450915	996.523814952945	3	333.181884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSNSYAIKK_	ENSG00000083845|ENST00000196551|RPS5;ENST00000599232.1_1_19:58906030-58906114:+|nuORF	83.6470233535746	0.08277643980271215	5				NaN	NaN	0	NaN	1032	2873	3906
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3908	16.463	NaN	6375.3	30	0	850.26	0.106			+	24412	LGALFWVL	8	52	459.77548981160345	917.5364266900069	2	459.7752685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LGALFWVL_	REV__ENST00000443071.6_2_14:101010291-101034310:-|nuORF	43.626045697637714	0.6338121648150432	5				NaN	NaN	0	NaN	1033	2873	3906
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3909	16.465	NaN	1596.5	30	0	259.17	0.106	+			38948	SSQQSVMSK	9	49	491.23648320048926	980.4584134677785	2	491.2364196777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSQQSVMSK_	ENSG00000173193|ENST00000474629|PARP14;nc|ENSG00000173193|Q460N5-1|PARP14;nc|ENSG00000173193|Q460N5-3|PARP14;nc|ENSG00000173193|Q460N5-4|PARP14;nc|ENSG00000173193|Q460N5-5|PARP14;PARP14|p.N1416Efs*19|1|0.2|ENSG00000173193|chr3:122718388-122718389|-/A|frameshift_variant	77.53327743719008	0.1082147015697554	5				NaN	NaN	0	NaN	1034	2873	3906
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3910	16.466	NaN	1690.4	30	0	132.53	0.036	+			20161	KEKRPPQTL	9	47	548.8271023545913	1095.6396517759824	2	548.8268432617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEKRPPQTL_	ENSG00000173467|ENST00000310398|AGR3	50.033510581677724	0.3025703251535696	5				NaN	NaN	0	NaN	1035	2873	3906
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3927	16.502	NaN	133000	30	0	26548	0.215	+			40225	STSENITQK	9	97	504.25411952887583	1006.4936861245517	2	504.25372314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STSENITQK_	DDX3Y|p.V655Gfs*2|1|0.09|ENSG00000067048|chrY:12918097-12918098|-/G|frameshift_variant;ENSG00000067048|ENST00000336079|DDX3Y;ENSG00000215301|ENST00000644876|DDX3X;nc|ENSG00000067048|O15523-2|DDX3Y;nc|ENSG00000215301|O00571-2|DDX3X	195.57289506066198	5.204600901213804E-05	5				NaN	NaN	0	NaN	1049	2876	3926
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3928	16.506	NaN	11017	30	0	2151.5	0.106	+			39673	STIGETSNR	9	57	482.73819548320904	963.4618380332181	2	482.7377014160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STIGETSNR_	ENST00000556687.5_1_14:23375339-23380602:-|nuORF;nc|ENSG00000100461|Q86U06-2|RBM23;nc|ENSG00000100461|Q86U06-4|RBM23	129.42129120953632	0.01549634589885217	5				NaN	NaN	0	NaN	1050	2876	3926
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3929	16.507	NaN	741.24	30	0	77.307	0.106	+			38878	SSNSYAIKK	9	43	499.2695589413834	996.5245649495669	2	499.26995849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSNSYAIKK_	ENSG00000083845|ENST00000196551|RPS5;ENST00000599232.1_1_19:58906030-58906114:+|nuORF	37.50817390946774	0.44948750990682723	5				NaN	NaN	0	NaN	1051	2876	3926
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3930	16.509	NaN	730.01	30	0	251.83	0.106			+	20780	KHYSKNDLL	9	32	559.3052368164062	NaN	0	559.3052368164062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KHYSKNDLL_	REV__VPS13D|p.S3410Y|1|0.04|ENSG00000048707|chr1:12362807-12362807|C/A|missense_variant	37.15910966729921	0.2899585034171616	5				NaN	NaN	0	NaN	1052	2876	3926
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3931	16.511	NaN	1199.1	30	0	222.4	0.036	+			16509	HEVDPVRRA	9	39	539.7906945799931	1077.566836226786	2	539.792236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HEVDPVRRA_	ENSG00000118971|ENST00000261254|CCND2;nc|ENSG00000118971|P30279-2|CCND2	21.9598887501803	0.5980208138527809	5				NaN	NaN	0	NaN	1053	2876	3926
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3943	16.537	NaN	111340	30	0	11545	0.214			+	35222	SALASKVHQ	9	102	470.7642555654522	939.5139581977044	2	470.7640075683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SALASKVHQ_	REV__ENSG00000105568|ENST00000322088|PPP2R1A;REV__ENSG00000137713|ENST00000527614|PPP2R1B;REV__ENST00000534521.5_1_11:111612322-111631898:-|nuORF;REV__nc|ENSG00000137713|P30154-2|PPP2R1B;REV__nc|ENSG00000137713|P30154-3|PPP2R1B;REV__nc|ENSG00000137713|P30154-5|PPP2R1B	110.11987700582712	0.028875675806141952	5				NaN	NaN	0	NaN	1062	2879	3942
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3944	16.54	NaN	9581.9	30	0	1577.6	0.106	+			14812	GTLGAVHK	8	56	391.72971755836153	781.4448821835231	2	391.7296447753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTLGAVHK_	ENSG00000099785|ENST00000215555|MARCHF2;nc|ENSG00000099785|Q9P0N8-2|MARCHF2	119.55681237560556	0.2351890295295504	5				NaN	NaN	0	NaN	1063	2879	3942
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3945	16.542	NaN	9226	30	0	4143	0.106			+	2287	ALYSPRKPA	9	35	334.8625393798074	1001.5657887396222	3	334.86248779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ALYSPRKPA_	REV__ENST00000334082.10_1_5:78808944-78809028:-|nuORF	27.882242232435846	0.5426732730940306	5				NaN	NaN	0	NaN	1064	2879	3942
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3946	16.544	NaN	4076.5	30	0	1042	0.106			+	17979	IHGGLPPQ	8	52	409.729744445087	817.4449359569741	2	409.72967529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IHGGLPPQ_	REV__ENST00000393784.7_1_5:172377848-172378373:+|nuORF	46.76643321282427	0.6143254112625767	5				NaN	NaN	0	NaN	1065	2879	3942
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3947	16.546	NaN	12818	30	0	1168.4	0.106				-1	 	0	79	435.24588436015415	868.4772157871083	2	435.24566650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1066	2879	3942
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3948	16.548	NaN	815.47	30	0	112.41	0.035				-1	QFGFMQKQ	8	46	515.245096173339	1028.475639413478	2	515.2451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_QFGFM(Oxidation (M))QKQ_	ENSG00000150995|ENST00000649015|ITPR1;nc|ENSG00000150995|Q14643-2|ITPR1;nc|ENSG00000150995|Q14643-3|ITPR1;nc|ENSG00000150995|Q14643-4|ITPR1;nc|ENSG00000150995|Q14643-5|ITPR1;nc|ENSG00000150995|Q14643-6|ITPR1;nc|ENSG00000150995|Q14643-7|ITPR1;nc|ENSG00000150995|Q14643-8|ITPR1	52.29916861842294	0.578018602984656	5				NaN	NaN	0	NaN	1067	2879	3942
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3949	16.548	NaN	1870.1	30	0	660.6	0.14	+			9395	EKENLTQQ	8	51	495.2485056912692	988.4824584493384	2	495.2490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EKENLTQQ_	ENSG00000144824|ENST00000431670|PHLDB2;nc|ENSG00000144824|Q86SQ0-2|PHLDB2;nc|ENSG00000144824|Q86SQ0-3|PHLDB2;PHLDB2|p.K1064Nfs*28|1|0.29|ENSG00000144824|chr3:111967696-111967696|A/-|frameshift_variant;PHLDB2|p.V822Lfs*6|1|0.1|ENSG00000144824|chr3:111945316-111945316|G/-|frameshift_variant	45.97224482568171	0.6192535143389125	5				NaN	NaN	0	NaN	1068	2879	3942
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3961	16.576	NaN	57169	30	0	15855	0.214	+			20103	KEKKEEQVI	9	80	565.8243496706075	1129.6341464080149	2	565.8251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEKKEEQVI_	ENSG00000164587|ENST00000407193|RPS14;ENST00000519690.1_1_5:149827146-149827347:-|nuORF	162.63603312974413	0.004023911058767669	5				NaN	NaN	0	NaN	1077	2882	3960
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3962	16.579	NaN	34203	30	0	14246	0.106	+			9926	EQVEEKKKL	9	58	377.5521140695681	1129.6345128089044	3	377.5521545410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EQVEEKKKL_	ENSG00000149488|ENST00000358864|TMC2;nc|ENSG00000149488|Q8TDI7-3|TMC2;TMC2|p.P719Tfs*4|1|0.36|ENSG00000149488|chr20:2617281-2617282|-/C|frameshift_variant	78.26377905018397	0.10505600812668463	5				NaN	NaN	0	NaN	1078	2882	3960
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3963	16.581	NaN	2259.8	30	0	1231.3	0.106	+			18529	ISLGHGHI	8	40	417.2351430648749	832.4557331965498	2	417.2351379394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ISLGHGHI_	EML5|p.D1019Efs*4|1|0.07|ENSG00000165521|chr14:88681957-88681958|-/AATATGT|frameshift_variant;EML5|p.G1621Efs*19|1|0.2|ENSG00000165521|chr14:88624982-88624982|C/-|frameshift_variant;EML5|p.N1682Mfs*7|1|0.04|ENSG00000165521|chr14:88621246-88621246|T/-|frameshift_variant;ENSG00000165521|ENST00000554922|EML5;ENST00000553281.5_1_14:89088194-89171927:-|nuORF;nc|ENSG00000165521|Q05BV3-2|EML5;nc|ENSG00000165521|Q05BV3|EML5	16.704963439144045	0.7946246187734944	5				NaN	NaN	0	NaN	1079	2882	3960
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3964	16.583	NaN	9538.9	30	0	4664	0.106				-1	GKKFKMKHH	9	48	400.22287918875986	1197.6468081664796	3	400.222900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))GKKFKM(Oxidation (M))KHH_	ENSG00000169155|ENST00000373464|ZBTB43;ZBTB43|p.V416M|1|0.38|ENSG00000169155|chr9:126833755-126833755|G/A|missense_variant	26.69291269510374	0.5537881896960711	5				NaN	NaN	0	NaN	1080	2882	3960
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3965	16.585	NaN	6002.6	30	0	1973.4	0.106	+			14062	GSIKGELRK	9	46	329.8697893529095	986.5875386589285	3	329.86968994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GSIKGELRK_	CHD1|p.E1321Kfs*22|3|0.3|ENSG00000153922|chr5:98870705-98870705|T/-|frameshift_variant;CHD1|p.E1321Rfs*17|1|0.48|ENSG00000153922|chr5:98870704-98870705|-/T|frameshift_variant;CHD1|p.V947Tfs*15|1|0.21|ENSG00000153922|chr5:98882003-98882004|CT/-|frameshift_variant;ENSG00000153922|ENST00000614616|CHD1;nc|ENSG00000153922|O14646-2|CHD1	53.351449002276354	0.2690372970092375	5				NaN	NaN	0	NaN	1081	2882	3960
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3966	16.587	NaN	4799.5	30	0	1448.5	0.035	+			20963	KKEGEKIR	8	53	494.3007239175119	986.5868949018238	2	494.3009338378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KKEGEKIR_	ENSG00000139112|ENST00000266458|GABARAPL1;nc|ENSG00000139112|Q9H0R8-2|GABARAPL1;nc|ENSG00000279980|Q9BY60|GABARAPL3	56.72105179125745	0.5342425954139568	5				NaN	NaN	0	NaN	1082	2882	3960
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3967	16.587	NaN	871.83	30	0	217.63	0.138	+			33733	RPLAGPGP	8	38	382.72437870532497	763.43420447745	2	382.7242126464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RPLAGPGP_	ENSG00000135597|ENST00000450536|REPS1;nc|ENSG00000135597|Q96D71-2|REPS1;nc|ENSG00000135597|Q96D71-3|REPS1;nc|ENSG00000135597|Q96D71-4|REPS1;REPS1|p.F519Yfs*3|1|0.21|ENSG00000135597|chr6:138917599-138917600|AA/-|frameshift_variant;REPS1|p.P550Lfs*14|1|0.22|ENSG00000135597|chr6:138915929-138915929|G/-|frameshift_variant	23.036711822280957	0.7814608874307191	5				NaN	NaN	0	NaN	1083	2882	3960
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3980	16.617	NaN	3229.8	30	0	585.78	0.214	+			6383	AVVEKIHAK	9	62	497.80555235589105	993.5965517785821	2	497.8059387207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVVEKIHAK_	ENSG00000172432|ENST00000307126|GTPBP2;nc|ENSG00000172432|Q9BX10-2|GTPBP2;nc|ENSG00000172432|Q9BX10-3|GTPBP2;nc|ENSG00000172432|Q9BX10-4|GTPBP2	114.85826248499774	0.024312442104607014	5				NaN	NaN	0	NaN	1093	2885	3979
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3981	16.621	NaN	1331.3	30	0	312.04	0.106	+			34954	SAAKSLLKK	9	55	473.30822532357945	944.6018977139589	2	473.30792236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAAKSLLKK_	ENSG00000145349|ENST00000511664|CAMK2D;nc|ENSG00000145349|Q13557-10|CAMK2D;nc|ENSG00000145349|Q13557-11|CAMK2D;nc|ENSG00000145349|Q13557-12|CAMK2D;nc|ENSG00000145349|Q13557-3|CAMK2D;nc|ENSG00000145349|Q13557-4|CAMK2D;nc|ENSG00000145349|Q13557-5|CAMK2D;nc|ENSG00000145349|Q13557-6|CAMK2D;nc|ENSG00000145349|Q13557-8|CAMK2D;nc|ENSG00000145349|Q13557-9|CAMK2D;nc|ENSG00000145349|Q13557|CAMK2D	88.17693792209575	0.07000514020414955	5				NaN	NaN	0	NaN	1094	2885	3979
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3982	16.622	NaN	3091.6	30	0	1751.8	0.106			+	5890	AVLAARRAAP	10	38	332.54031574612293	NaN	0	332.20623779296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVLAARRAAP_	REV__ENSG00000159147|ENST00000303071|DONSON;REV__nc|ENSG00000159147|Q9NYP3-2|DONSON;REV__nc|ENSG00000159147|Q9NYP3-3|DONSON	30.317721548370564	0.4006274431774794	5				NaN	NaN	0	NaN	1095	2885	3979
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3983	16.624	NaN	2532.3	30	0	390.2	0.106	+			31432	QKPHSNTRK	9	61	548.3037080141671	1094.5928630951341	2	548.304443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QKPHSNTRK_	ENSG00000053328|ENST00000338882|METTL24	56.43379154798735	0.2433427591689151	5				NaN	NaN	0	NaN	1096	2885	3979
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3984	16.626	NaN	1557.9	30	0	344.47	0.106			+	20299	KEPNQSLLA	9	44	500.27692743559334	998.5393019379867	2	500.27728271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEPNQSLLA_	REV__ENSG00000130830|ENST00000369534|MPP1;REV__ENST00000462825.5_1_X:154011696-154028031:-|nuORF;REV__nc|ENSG00000130830|Q00013-2|MPP1;REV__nc|ENSG00000130830|Q00013-3|MPP1	66.42927471994793	0.16001998865088202	5				NaN	NaN	0	NaN	1097	2885	3979
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3985	16.628	NaN	1743.9	30	0	582.61	0.037	+			5603	AVCEKTFKH	9	33	373.858787084142	1118.554531852626	3	373.8590087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_AVC(Carbamidomethyl (C))EKTFKH_	ENSG00000166188|ENST00000299237|ZNF319	42.86426827375447	0.38666266728046506	5				NaN	NaN	0	NaN	1098	2885	3979
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3986	16.628	NaN	3259.8	30	0	1581.6	0.142	+			16504	HEVARQSRL	9	45	365.87125512792784	1094.5919359839836	3	365.8716735839844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HEVARQSRL_	ENSG00000130589|ENST00000467148|HELZ2;HELZ2|p.G2213Vfs*22|1|0.14|ENSG00000130589|chr20:63561876-63561876|C/-|frameshift_variant;HELZ2|p.P1310Rfs*32|1|0.09|ENSG00000130589|chr20:63564893-63564893|G/-|frameshift_variant;HELZ2|p.R2206Vfs*29|2|0.28|ENSG00000130589|chr20:63561898-63561898|G/-|frameshift_variant;nc|ENSG00000130589|Q9BYK8-2|HELZ2;nc|ENSG00000130589|Q9BYK8|HELZ2	35.61828744233558	0.47037581924408073	5				NaN	NaN	0	NaN	1099	2885	3979
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3997	16.654	NaN	10648	30	0	5447.4	0.214	+			14602	GTGASGSFK	9	51	406.20082999970595	810.3871070662119	2	406.20068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTGASGSFK_	ENSG00000124575|ENST00000244534|H1-3;ENSG00000124610|ENST00000244573|H1-1;ENSG00000168298|ENST00000304218|H1-4;ENSG00000184357|ENST00000331442|H1-5;ENSG00000187475|ENST00000338379|H1-6;ENSG00000187837|ENST00000343677|H1-2	113.41158876095287	0.025516849225023126	5				NaN	NaN	0	NaN	1107	2888	3996
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3998	16.658	NaN	1578.5	30	0	114.56	0.106			+	33582	RLLGWIHA	8	47	483.2878571203862	NaN	0	483.2879333496094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RLLGWIHA_	REV__ENST00000527065.1_1_11:104915521-104915599:-|nuORF	29.841539824830324	1.7418937515398478	5				NaN	NaN	0	NaN	1108	2888	3996
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3999	16.66	NaN	857.13	30	0	169.72	0.036				-1	VKLQIKCGR	9	33	551.3324584960938	NaN	0	551.3324584960938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_VKLQIKC(Carbamidomethyl (C))GR_	ENSG00000183621|ENST00000436087|ZNF438;nc|ENSG00000183621|Q7Z4V0-2|ZNF438;nc|ENSG00000183621|Q7Z4V0-3|ZNF438	23.04248740728303	0.3589936788096251	5				NaN	NaN	0	NaN	1109	2888	3996
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4015	16.701	NaN	5507.4	30	0	868.32	0.214	+			28349	NEKERQAAL	9	67	529.7833897572026	1057.552226581205	2	529.78369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NEKERQAAL_	CAPG|p.A301V|1|0.35|ENSG00000042493|chr2:85395617-85395617|G/A|missense_variant;ENSG00000042493|ENST00000263867|CAPG;nc|ENSG00000042493|P40121-2|CAPG	75.04331003522576	0.118981335847003	5				NaN	NaN	0	NaN	1119	2894	4014
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4016	16.704	NaN	2550.9	30	0	516.83	0.106	+			20077	KEKGKISSL	9	57	495.30296056812705	988.5913682030541	2	495.3029479980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEKGKISSL_	ENSG00000131558|ENST00000253861|EXOC4;ENST00000462055.5_1_7:132937857-133164897:+|nuORF;ENST00000486013.5_1_7:132937857-133314895:+|nuORF;EXOC4|p.N439Ifs*15|1|0.39|ENSG00000131558|chr7:133475456-133475456|A/-|frameshift_variant;EXOC4|p.N439Kfs*28|1|0.17|ENSG00000131558|chr7:133475455-133475456|-/A|frameshift_variant;nc|ENSG00000131558|Q96A65-2|EXOC4	93.5975768576971	0.05472259948179787	5				NaN	NaN	0	NaN	1120	2894	4014
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4017	16.706	NaN	887.35	30	0	103.97	0.036			+	27313	MGVVKGLAWM	10	39	546.2894287109375	NaN	0	546.2894287109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MGVVKGLAWM_	REV__EHD2|p.T246M|1|0.43|ENSG00000024422|chr19:47726046-47726046|C/T|missense_variant	24.20275056022122	0.4201028297492154	5				NaN	NaN	0	NaN	1121	2894	4014
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4028	16.732	NaN	1035.5	30	0	181.45	0.214	+			39975	STMKTMEDK	9	43	535.7464978020868	1069.4784426709734	2	535.7470092773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STMKTMEDK_	EAPP|p.F278Sfs*4|1|0.34|ENSG00000129518|chr14:34516335-34516335|A/-|frameshift_variant;ENSG00000129518|ENST00000250454|EAPP;ENST00000555683.1_1_14:35005207-35008876:-|nuORF	42.86426827375447	0.38666266728046506	5				NaN	NaN	0	NaN	1129	2897	4027
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4029	16.736	NaN	420.02	30	0	93.074	0.035	+			44516	TSTGSTGIVIV	11	37	517.7919311523438	NaN	0	517.7919311523438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TSTGSTGIVIV_	tr|U7SYH7|U7SYH7_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00884PE=4SV=1	20.94693142431847	0.456735970842152	5				NaN	NaN	0	NaN	1130	2897	4027
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4040	16.76	NaN	10982	30	0	1787.6	0.214	+			45687	VAAEKSFNK	9	86	497.27187896406	992.5292049949201	2	497.2723388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VAAEKSFNK_	ENSG00000086589|ENST00000199814|RBM22;ENST00000520132.1_1_5:150071315-150073858:-|nuORF;nc|ENSG00000086589|Q9NW64-2|RBM22	158.07458414430337	0.004987072822166904	5				NaN	NaN	0	NaN	1138	2900	4039
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4041	16.763	NaN	2180.8	30	0	129.64	0.036			+	41418	SVNENVKGNK	10	64	544.7884668387325	1087.5623807442648	2	544.7901611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVNENVKGNK_	REV__tr|U7T3J3|U7T3J3_FUSNUAutotransporterdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00684PE=4SV=1	77.31757898189308	0.2175361111083648	5				NaN	NaN	0	NaN	1139	2900	4039
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4052	16.788	NaN	28360	30	0	7019.4	0.214	+			32964	REDNQTNRL	9	89	573.2863176989539	1144.5580824647077	2	573.2868041992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_REDNQTNRL_	ENSG00000087460|ENST00000371085|GNAS;ENST00000313949.11_1_20:57415898-57485881:+|nuORF;ENST00000371075.7_3_20:57415898-57485881:+|nuORF;ENST00000476196.5_1_20:57478538-57485881:+|nuORF;ENST00000477931.5_1_20:57464155-57485881:+|nuORF;ENST00000480975.5_1_20:57464272-57485881:+|nuORF;ENST00000496934.5_1_20:57473969-57485881:+|nuORF;nc|ENSG00000087460|P63092-2|GNAS;nc|ENSG00000087460|P63092-3|GNAS;nc|ENSG00000087460|P63092-4|GNAS;nc|ENSG00000087460|Q5JWF2-2|GNAS;nc|ENSG00000087460|Q5JWF2|GNAS	143.37361013837676	0.008897369944672323	5				NaN	NaN	0	NaN	1147	2903	4051
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4053	16.791	NaN	13329	30	0	2577.1	0.106	+			22792	KVFGGTVHK	9	64	486.7848303543157	971.5551077754315	2	486.7848205566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVFGGTVHK_	ENSG00000163655|ENST00000496455|GMPS;GMPS|p.S473Lfs*26|1|0.37|ENSG00000163655|chr3:155922281-155922281|T/-|frameshift_variant;nc|ENSG00000163655|P49915-2|GMPS	153.03582135801034	0.006161527642367307	5				NaN	NaN	0	NaN	1148	2903	4051
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4054	16.793	NaN	6538.4	30	0	1128.6	0.106	+			3494	ASSHVPIQK	9	65	483.7718728887189	965.5291928442379	2	483.7716064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASSHVPIQK_	ENSG00000158290|ENST00000371322|CUL4B;nc|ENSG00000158290|Q13620|CUL4B	72.87924865735499	0.12833875048249987	5				NaN	NaN	0	NaN	1149	2903	4051
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4055	16.795	NaN	23019	30	0	12556	0.106	+			22793	KVFGGTVHK	9	67	324.859045128411	971.555305985433	3	324.8591003417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KVFGGTVHK_	ENSG00000163655|ENST00000496455|GMPS;GMPS|p.S473Lfs*26|1|0.37|ENSG00000163655|chr3:155922281-155922281|T/-|frameshift_variant;nc|ENSG00000163655|P49915-2|GMPS	75.04331003522576	0.118981335847003	5				NaN	NaN	0	NaN	1150	2903	4051
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4056	16.797	NaN	3169.7	30	0	606.93	0.106			+	37271	SLAGGSLGGV	10	51	409.22446248031235	816.4343720274247	2	409.22454833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SLAGGSLGGV_	REV__ENSG00000068323|ENST00000315869|TFE3	68.78682469695295	0.28723163847957256	5				NaN	NaN	0	NaN	1151	2903	4051
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4057	16.799	NaN	1399.2	30	0	493.33	0.035			+	-1	VAKKMDKAS	9	23	331.8504333496094	NaN	0	331.8504333496094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_VAKKM(Oxidation (M))DKAS_	REV__ENSG00000132561|ENST00000254898|MATN2;REV__nc|ENSG00000132561|O00339-2|MATN2;REV__nc|ENSG00000132561|O00339-3|MATN2;REV__nc|ENSG00000132561|O00339-4|MATN2	19.996771675451527	0.3693019437812985	5				NaN	NaN	0	NaN	1152	2903	4051
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4058	16.799	NaN	1118.7	30	0	186.38	0.137	+			24304	LFGAARGP	8	36	394.7243224308714	NaN	0	394.72412109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LFGAARGP_	ENSG00000130881|ENST00000253193|LRP3;ENST00000590278.1_1_19:33696051-33698478:+|nuORF	28.2542754592877	1.7418937515398478	5				NaN	NaN	0	NaN	1153	2903	4051
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4070	16.827	NaN	954.97	30	0	183.08	0.214	+			39334	STCDHGIVAK	10	43	544.2637329101562	NaN	0	544.2637329101562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_STC(Carbamidomethyl (C))DHGIVAK_	ENSG00000130826|ENST00000369550|DKC1;nc|ENSG00000130826|O60832-2|DKC1	65.46538089061403	0.18964705739380194	5				NaN	NaN	0	NaN	1162	2906	4069
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4071	16.831	NaN	2739.7	30	0	537.71	0.106	+			19428	KAPVTKVAA	9	57	442.78179083357094	883.5490287339419	2	442.7816467285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KAPVTKVAA_	ENSG00000107438|ENST00000329399|PDLIM1;ENST00000604187.1_1_14:50517346-50518003:+|nuORF	58.22992032128504	0.22837015374068087	5				NaN	NaN	0	NaN	1163	2906	4069
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4072	16.833	NaN	4372	30	0	744.94	0.106			+	19762	KEAATAATAVA	11	64	502.2750998369813	1002.5356467407627	2	502.2749938964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEAATAATAVA_	REV__ENSG00000169057|ENST00000453960|MECP2;REV__nc|ENSG00000169057|P51608|MECP2	61.76455937419982	0.30770400073182314	5				NaN	NaN	0	NaN	1164	2906	4069
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4073	16.834	NaN	1391.6	30	0	265.81	0.106	+			30207	PSREQTVL	8	47	465.25628140269043	928.4980098721809	2	465.2563171386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PSREQTVL_	ENST00000306336.5_2_2:85835211-85835250:-|nuORF	30.503639358989545	0.7238069182250283	5				NaN	NaN	0	NaN	1165	2906	4069
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4074	16.836	NaN	1112.6	30	0	267.95	0.106	+			14004	GSEGPSYAK	9	37	448.2116154001977	894.4086778671954	2	448.21142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GSEGPSYAK_	ENSG00000105197|ENST00000607714|TIMM50;ENST00000595286.1_1_19:39971511-39973801:+|nuORF;ENST00000598125.5_1_19:39971493-39973604:+|nuORF;nc|ENSG00000105197|Q3ZCQ8-2|TIMM50;TIMM50|p.H211Mfs*21|1|0.44|ENSG00000105197|chr19:39486426-39486426|C/-|frameshift_variant	62.107414245175825	0.1960472003779324	5				NaN	NaN	0	NaN	1166	2906	4069
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4075	16.838	NaN	578.11	30	0	42.248	0.036			+	-1	LGSAAALKCDA	11	37	538.7738037109375	NaN	0	538.7738037109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_LGSAAALKC(Carbamidomethyl (C))DA_	REV__ENSG00000120068|ENST00000239144|HOXB8	23.52269567125451	0.456735970842152	5				NaN	NaN	0	NaN	1167	2906	4069
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4076	16.839	NaN	1305.7	30	0	468.32	0.145			+	29613	PGAAESPP	8	27	363.1781921386719	NaN	0	363.1781921386719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PGAAESPP_	REV__ENST00000357430.7_1_2:223765437-223773458:+|nuORF	21.70233525837049	1.7418937515398478	5				NaN	NaN	0	NaN	1168	2906	4069
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4089	16.869	NaN	3549.5	30	0	465.73	0.215			+	8794	EEKEKLGLG	9	55	501.7767714548264	NaN	0	501.7767639160156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EEKEKLGLG_	REV__ENSG00000126254|ENST00000262633|RBM42;REV__nc|ENSG00000126254|Q9BTD8-2|RBM42;REV__nc|ENSG00000126254|Q9BTD8-3|RBM42;REV__nc|ENSG00000126254|Q9BTD8-4|RBM42;REV__RBM42|p.A251V|1|0.45|ENSG00000126254|chr19:35633754-35633754|C/T|missense_variant	55.50420428727701	0.16876052142120426	5				NaN	NaN	0	NaN	1178	2909	4088
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4090	16.872	NaN	539.98	30	0	47.28	0.106			+	37679	SLRWSWLR	8	36	552.3069458007812	NaN	0	552.3069458007812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLRWSWLR_	REV__ENST00000600726.5_1_19:59081765-59082303:+|nuORF	21.9598887501803	1.7418937515398478	5				NaN	NaN	0	NaN	1179	2909	4088
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4091	16.874	NaN	804.29	30	0	191.05	0.106	+			40226	STSENITQK	9	38	504.25411952887583	1006.4936861245517	2	504.2535705566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STSENITQK_	DDX3Y|p.V655Gfs*2|1|0.09|ENSG00000067048|chrY:12918097-12918098|-/G|frameshift_variant;ENSG00000067048|ENST00000336079|DDX3Y;ENSG00000215301|ENST00000644876|DDX3X;nc|ENSG00000067048|O15523-2|DDX3Y;nc|ENSG00000215301|O00571-2|DDX3X	63.53385203322761	0.18415635464017938	5				NaN	NaN	0	NaN	1180	2909	4088
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4092	16.876	NaN	3322.8	30	0	554.51	0.106	+			14371	GTAEPGGSMK	10	52	467.71879419967206	933.4230354661441	2	467.71856689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTAEPGGSMK_	ENSG00000183963|ENST00000333137|SMTN;ENST00000460658.5_1_22:31484094-31491444:+|nuORF;ENST00000489337.5_1_22:31484532-31494796:+|nuORF;nc|ENSG00000183963|P53814-6|SMTN;nc|ENSG00000183963|P53814|SMTN;SMTN|p.S536Vfs*33|1|0.33|ENSG00000183963|chr22:31091813-31091813|C/-|frameshift_variant	44.377184641726394	0.5088115166961078	5				NaN	NaN	0	NaN	1181	2909	4088
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4093	16.878	NaN	5176.7	30	0	1802.4	0.036	+			23080	KVVDLANKK	9	38	338.8816025878167	1013.6229783636502	3	338.88140869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KVVDLANKK_	ENSG00000104413|ENST00000433389|ESRP1;ESRP1|p.L333Sfs*55|1|0.35|ENSG00000104413|chr8:94668009-94668009|G/-|frameshift_variant;ESRP1|p.N512Hfs*7|2|0.33|ENSG00000104413|chr8:94674383-94674384|AA/-|frameshift_variant;ESRP1|p.N512Kfs*8|1|0.48|ENSG00000104413|chr8:94674382-94674383|-/A|frameshift_variant;ESRP1|p.N512Tfs*2|2|0.36|ENSG00000104413|chr8:94674383-94674383|A/-|frameshift_variant;nc|ENSG00000104413|Q6NXG1-2|ESRP1;nc|ENSG00000104413|Q6NXG1-3|ESRP1;nc|ENSG00000104413|Q6NXG1-4|ESRP1;nc|ENSG00000104413|Q6NXG1-5|ESRP1	61.691277971877994	0.19951612995419254	5				NaN	NaN	0	NaN	1182	2909	4088
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4108	16.91	NaN	20431	30	0	4230.4	0.214				-1	SLCVELAGISQ	11	59	392.8685851266431	1175.5839259801294	3	392.86834716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SLC(Carbamidomethyl (C))VELAGISQ_	ENST00000266560.7_1_12:7281390-7281504:-|nuORF	55.08391021199286	0.3673379875553588	5				NaN	NaN	0	NaN	1194	2912	4107
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4109	16.914	NaN	4536.2	30	0	1682.3	0.106	+			38481	SSATETINK	9	72	475.7432048679912	949.4718568027824	2	475.74273681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSATETINK_	ENSG00000096696|ENST00000379802|DSP	132.757866228626	0.013877640931359021	5				NaN	NaN	0	NaN	1195	2912	4107
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4110	16.916	NaN	3990.5	30	0	538	0.106	+			42485	TANDANTKY	9	57	499.233282505105	996.4520120770101	2	499.2326965332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TANDANTKY_	ENSG00000149182|ENST00000524782|ARFGAP2;ENST00000395449.7_1_11:47187835-47198404:-|nuORF;ENST00000524727.5_1_11:47194869-47198404:-|nuORF;ENST00000527097.5_1_11:47193699-47198404:-|nuORF;nc|ENSG00000149182|Q8N6H7-2|ARFGAP2	99.78786539795823	0.03941834715970116	5				NaN	NaN	0	NaN	1196	2912	4107
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4111	16.917	NaN	7172.7	30	0	3069.5	0.106	+			45019	TVFKNGKVTK	10	57	374.56073537409867	1120.660376722496	3	374.5606689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TVFKNGKVTK_	ENSG00000105835|ENST00000222553|NAMPT;ENST00000440465.1_1_10:36811746-36813066:-|nuORF	38.753607047826485	0.5606299674732264	5				NaN	NaN	0	NaN	1197	2912	4107
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4112	16.919	NaN	2591.4	30	0	341.58	0.106				-1	QFCPTYIK	8	64	528.7606761534896	1055.5067993737791	2	528.7609252929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_QFC(Carbamidomethyl (C))PTYIK_	LIX1L|p.K157Yfs*5|1|0.1|ENSG00000271601|chr1:145942842-145942843|-/AATGTAA|frameshift_variant	58.78195531508484	0.5138399468736706	5				NaN	NaN	0	NaN	1198	2912	4107
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4113	16.921	NaN	2918.2	30	0	641.43	0.036			+	-1	MLVLEKCGI	9	47	354.8607482910156	NaN	0	354.8607482910156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_MLVLEKC(Carbamidomethyl (C))GI_	REV__ENST00000392183.7_1_19:36501753-36505114:-|nuORF;REV__ENST00000468004.5_1_19:36501827-36504438:-|nuORF;REV__ENST00000590666.5_1_19:36502237-36505114:-|nuORF;REV__nc|ENSG00000239382|Q3KRA9-2|ALKBH6;REV__nc|ENSG00000239382|Q3KRA9-3|ALKBH6	20.94693142431847	0.3660861156085067	5				NaN	NaN	0	NaN	1199	2912	4107
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4114	16.922	NaN	2408.2	30	0	268.76	0.141	+			45020	TVFKNGKVTK	10	62	561.3380062156092	1120.6614594980183	2	561.3380737304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TVFKNGKVTK_	ENSG00000105835|ENST00000222553|NAMPT;ENST00000440465.1_1_10:36811746-36813066:-|nuORF	104.42354056486148	0.06456012287859861	5				NaN	NaN	0	NaN	1200	2912	4107
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4128	16.954	NaN	6751.4	30	0	2536.8	0.214	+			6357	AVTSGVATK	9	50	417.2403147342318	832.4660765352636	2	417.2402648925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVTSGVATK_	ENSG00000249992|ENST00000503771|TMEM158;nc|ENSG00000249992|Q8WZ71-2|TMEM158	82.24051045832904	0.08786059719216216	5				NaN	NaN	0	NaN	1211	2915	4127
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4129	16.957	NaN	1872.1	30	0	596.01	0.106	+			22519	KTQEIFHSK	9	54	559.3043221306039	1116.5940913280076	2	559.3051147460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTQEIFHSK_	ENSG00000108557|ENST00000353383|RAI1;nc|ENSG00000258436|Q7Z5J4-2|RAI1;nc|ENSG00000258436|Q7Z5J4-3|RAI1	89.02883481214508	0.06760336634167786	5				NaN	NaN	0	NaN	1212	2915	4127
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4130	16.959	NaN	1620.2	30	0	260.36	0.106	+			27960	MVKHRGDK	8	59	485.7659756900299	NaN	0	485.76654052734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MVKHRGDK_	ENSG00000158850|ENST00000319769|B4GALT3;ENST00000470882.5_1_1:161141608-161143639:-|nuORF	38.80614096846853	1.7418937515398478	5				NaN	NaN	0	NaN	1213	2915	4127
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4131	16.961	NaN	729.65	30	0	116.89	0.035	+			16758	HLSSALRIQ	9	37	512.798583984375	NaN	0	512.798583984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HLSSALRIQ_	ENST00000575325.1_1_18:50073-73351:-|nuORF	29.170058357718403	0.3302935627494407	5				NaN	NaN	0	NaN	1214	2915	4127
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4143	16.987	NaN	2275.7	30	0	991.03	0.214			+	37742	SLTQNTSL	8	49	432.2277085943029	862.4408642554058	2	432.227294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLTQNTSL_	REV__ENSG00000143382|ENST00000271643|ADAMTSL4;REV__ENST00000489159.1_1_1:150530894-150532669:+|nuORF;REV__nc|ENSG00000143382|Q6UY14-3|ADAMTSL4	51.33545320467046	0.5859736979383976	5				NaN	NaN	0	NaN	1223	2918	4142
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4144	16.991	NaN	2068.3	30	0	325.78	0.106			+	30892	QEKLDEKKI	9	58	565.8243496706075	1129.6341464080149	2	565.8246459960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QEKLDEKKI_	REV__ENSG00000136449|ENST00000323776|MYCBPAP;REV__ENST00000470609.5_1_17:48585906-48599496:+|nuORF;REV__nc|ENSG00000136449|Q8TBZ2|MYCBPAP	66.9202029811203	0.15592758990009112	5				NaN	NaN	0	NaN	1224	2918	4142
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4145	16.993	NaN	1924.4	30	0	251.71	0.106	+			44457	TSNPVTTTK	9	51	474.7533500664414	947.4921471996828	2	474.7535095214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TSNPVTTTK_	COL6A3|p.A2956Lfs*45|1|0.33|ENSG00000163359|chr2:237336234-237336234|C/-|frameshift_variant;COL6A3|p.A2957Lfs*44|1|0.33|ENSG00000163359|chr2:237336232-237336232|A/-|frameshift_variant;COL6A3|p.G3016Vfs*19|1|0.34|ENSG00000163359|chr2:237334810-237334810|G/-|frameshift_variant;ENSG00000163359|ENST00000295550|COL6A3;ENST00000491769.1_1_2:238233419-238250825:-|nuORF;nc|ENSG00000163359|P12111-2|COL6A3;nc|ENSG00000163359|P12111-4|COL6A3	59.93077597824379	0.21419174904018318	5				NaN	NaN	0	NaN	1225	2918	4142
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4146	16.994	NaN	1454	30	0	197.9	0.035			+	-1	NIDEDFCM	8	52	522.1929918330048	1042.3714307328096	2	522.1939086914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_NIDEDFC(Carbamidomethyl (C))M_	REV__ENSG00000140623|ENST00000268231|SEPTIN12;REV__nc|ENSG00000140623|Q8IYM1-2|SEPTIN12	26.79610172149135	0.7524337208463756	5				NaN	NaN	0	NaN	1226	2918	4142
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4158	17.02	NaN	8496	30	0	1097.7	0.214	+			32944	REAVEQQKV	9	71	543.7993456667866	1085.5841384003731	2	543.7998657226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_REAVEQQKV_	ENSG00000125844|ENST00000377813|RRBP1;nc|ENSG00000125844|Q9P2E9-3|RRBP1;RRBP1|p.A628Gfs*69|1|0.35|ENSG00000125844|chr20:17621915-17621916|-/T|frameshift_variant	117.81106730687013	0.02252488733980868	5				NaN	NaN	0	NaN	1235	2921	4157
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4159	17.024	NaN	3472.6	30	0	768.63	0.032			+	3816	ATAHPDDV	8	41	413.1907354672339	824.3669180012678	2	413.1908264160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATAHPDDV_	REV__ENST00000301764.11_1_11:61066939-61067056:-|nuORF	26.79610172149135	0.7524337208463756	5				NaN	NaN	0	NaN	1236	2921	4157
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4172	17.051	NaN	7598.2	30	0	1943.4	0.214	+			35158	SAIDKMTKK	9	64	511.2894519632795	1020.564350993359	2	511.28961181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAIDKMTKK_	CTNNA1|p.K493Nfs*31|1|0.19|ENSG00000044115|chr5:138917827-138917827|A/-|frameshift_variant;CTNNA1|p.T832*|1|0.29|ENSG00000044115|chr5:138933859-138933862|CAGA/-|frameshift_variant;ENSG00000044115|ENST00000302763|CTNNA1;ENST00000515849.2_1_5:114726864-114727050:-|nuORF;ENST00000517534.5_1_5:138163374-138223382:+|nuORF;nc|ENSG00000044115|P35221-2|CTNNA1	154.1183686248401	0.005909203230691971	5				NaN	NaN	0	NaN	1246	2924	4171
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4173	17.055	NaN	4852.1	30	0	859.25	0.106	+			22778	KVFDAKPSAK	10	66	545.8166047496861	1089.6186565661721	2	545.8176879882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVFDAKPSAK_	ENSG00000143889|ENST00000449105|HNRNPLL;nc|ENSG00000143889|Q8WVV9-4|HNRNPLL;nc|ENSG00000143889|Q8WVV9-5|HNRNPLL	118.23318122614258	0.029825105341188273	5				NaN	NaN	0	NaN	1247	2924	4171
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4174	17.057	NaN	5261.8	30	0	661.34	0.106	+			12772	GELNSRLSS	9	56	481.74857990747205	961.4826068817441	2	481.7490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GELNSRLSS_	ENSG00000204267|ENST00000374897|TAP2;nc|ENSG00000204267|Q03519-2|TAP2;TAP2|p.K532Sfs*29|1|0.43|ENSG00000204267|chr6:32830307-32830307|T/-|frameshift_variant;TAP2|p.Q330Rfs*50|1|0.33|ENSG00000204267|chr6:32832783-32832783|C/-|frameshift_variant;TAP2|p.V467Lfs*2|1|0.15|ENSG00000204267|chr6:32830680-32830680|C/-|frameshift_variant	67.49366992349736	0.1516260258713357	5				NaN	NaN	0	NaN	1248	2924	4171
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4175	17.058	NaN	2272.7	30	0	507.68	0.106			+	11182	FGVMCDARG	9	40	478.209552527697	NaN	0	478.209716796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FGVMCDARG_	REV__ENST00000511331.5_1_5:180673547-180673826:+|nuORF	47.91560031466742	0.22105767942158736	5				NaN	NaN	0	NaN	1249	2924	4171
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4176	17.06	NaN	927.03	30	0	113.81	0.106			+	24851	LKDLKKKQ	8	46	500.83038330078125	NaN	0	500.83038330078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LKDLKKKQ_	REV__ENSG00000055208|ENST00000637181|TAB2	31.529811441608018	1.7418937515398478	5				NaN	NaN	0	NaN	1250	2924	4171
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4177	17.062	NaN	849.11	30	0	228.37	0.034			+	-1	HIMGGHMI	8	30	456.2147911444815	NaN	0	456.2148742675781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_HIMGGHM(Oxidation (M))I_	REV__CASK|p.N757Tfs*40|1|0.18|ENSG00000147044|chrX:41534753-41534753|T/-|frameshift_variant;REV__ENSG00000147044|ENST00000378163|CASK;REV__ENST00000472704.1_1_X:41411986-41437658:-|nuORF;REV__nc|ENSG00000147044|O14936-2|CASK;REV__nc|ENSG00000147044|O14936-3|CASK;REV__nc|ENSG00000147044|O14936-4|CASK;REV__nc|ENSG00000147044|O14936-5|CASK;REV__nc|ENSG00000147044|O14936-6|CASK	33.49298260027079	1.7418937515398478	5				NaN	NaN	0	NaN	1251	2924	4171
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4178	17.063	NaN	1337.9	30	0	232.06	0.141	+			9974	ERGKVRAIQ	9	43	528.8178627696922	1055.6211726061842	2	528.8187255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ERGKVRAIQ_	ENSG00000170209|ENST00000303941|ANKK1	34.172542307311794	0.4838870758800184	5				NaN	NaN	0	NaN	1252	2924	4171
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4192	17.094	NaN	1021.8	30	0	115.89	0.214	+			19256	KAEDSARTL	9	44	495.7639465332031	NaN	0	495.7639465332031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAEDSARTL_	ENSG00000174989|ENST00000652555|FBXW8;nc|ENSG00000174989|Q8N3Y1-2|FBXW8	45.02220120713402	0.24099765136254067	5				NaN	NaN	0	NaN	1263	2927	4191
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4193	17.098	NaN	951.24	30	0	97.986	0.106	+			20679	KGNMVVETEP	10	52	552.2766032563906	NaN	0	552.2764282226562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KGNMVVETEP_	ENSG00000088876|ENST00000278772|ZNF343;nc|ENSG00000088876|Q6P1L6-2|ZNF343	54.776311868738084	0.27540594196716844	5				NaN	NaN	0	NaN	1264	2927	4191
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4194	17.1	NaN	1237.9	30	0	93.641	0.036	+			39345	STCGKCGYPAK	11	51	557.7544663878214	1113.4943798424426	2	557.7538452148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STCGKCGYPAK_	ENSG00000145592|ENST00000274242|RPL37;ENST00000504562.1_1_5:40832608-40835123:-|nuORF;ENST00000507642.5_1_5:40832592-40834660:-|nuORF	59.93077597824379	0.32407304095777845	5				NaN	NaN	0	NaN	1265	2927	4191
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4202	17.118	NaN	68687	30	0	11431	0.214	+			41433	SVNGKVLSK	9	89	466.2820184593791	930.5494839855583	2	466.2818908691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVNGKVLSK_	ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2;NOMO1|p.P1102Hfs*42|1|0.36|ENSG00000103512|chr16:14886838-14886838|C/-|frameshift_variant;NOMO1|p.P141Sfs*12|1|0.33|ENSG00000103512|chr16:14846592-14846593|-/AG|frameshift_variant	136.5150327860613	0.012115003498012726	5				NaN	NaN	0	NaN	1270	2930	4201
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4203	17.121	NaN	7613.6	30	0	2380.5	0.106	+			389	AASEAGRAM	9	69	432.2055376247471	862.3965223162942	2	432.205322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AASEAGRAM_	ENSG00000071859|ENST00000393600|FAM50A	77.31757898189308	0.1091473830098891	5				NaN	NaN	0	NaN	1271	2930	4201
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4204	17.123	NaN	672.45	30	0	67.029	0.036			+	19655	KDLMWHKP	8	37	527.7794721730228	1053.5443914128455	2	527.7804565429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KDLMWHKP_	REV__ENSG00000129824|ENST00000250784|RPS4Y1;REV__ENSG00000198034|ENST00000316084|RPS4X;REV__ENSG00000280969|ENST00000629237|RPS4Y2;REV__ENST00000373626.4_1_X:71494279-71497060:-|nuORF;REV__ENST00000446897.1_1_10:32392029-32392209:-|nuORF;REV__ENST00000486733.2_1_X:71494866-71496063:-|nuORF	29.14955571784316	0.7342621283720113	5				NaN	NaN	0	NaN	1272	2930	4201
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4216	17.149	NaN	18273	30	0	3729.6	0.214	+			35012	SACHKYFEK	9	85	390.51839189628714	1168.5333462890615	3	390.5183410644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SAC(Carbamidomethyl (C))HKYFEK_	ENSG00000163993|ENST00000296370|S100P;ENST00000513778.1_1_4:6695618-6698766:+|nuORF;S100P|p.T82M|1|0.3|ENSG00000163993|chr4:6696999-6696999|C/T|missense_variant	85.86182877749512	0.07653218437724067	5				NaN	NaN	0	NaN	1281	2933	4215
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4217	17.152	NaN	7348.6	30	0	2071.5	0.106	+			15089	GTQGSPITK	9	56	444.74290409062695	887.4712552480539	2	444.74261474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTQGSPITK_	ENSG00000110237|ENST00000263674|ARHGEF17;ENST00000536481.1_1_11:73075528-73075729:+|nuORF	99.01295224348159	0.040209060045561164	5				NaN	NaN	0	NaN	1282	2933	4215
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4218	17.154	NaN	7011.5	30	0	2093.2	0.106			+	19218	KAAGALSK	8	56	373.2320175508762	744.4494821685524	2	373.2320556640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KAAGALSK_	REV__ENSG00000135569|ENST00000258034|TAAR5	68.78682469695295	0.41700713582915416	5				NaN	NaN	0	NaN	1283	2933	4215
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4219	17.156	NaN	604.57	30	0	62.775	0.106				-1	DTLVCLSEMRA	11	37	655.8082885742188	NaN	0	655.8082885742188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_DTLVC(Carbamidomethyl (C))LSEM(Oxidation (M))RA_	ENSG00000101695|ENST00000217740|RNF125;ENST00000583184.1_1_18:29598826-29691722:+|nuORF	32.81241826257853	0.4191849651971536	5				NaN	NaN	0	NaN	1284	2933	4215
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4220	17.158	NaN	625.64	30	0	102.4	0.106				-1	RETVIKQTM	9	33	561.3029174804688	NaN	0	561.3029174804688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_RETVIKQTM(Oxidation (M))_	ENSG00000198498|ENST00000358572|TMA16;ENST00000508652.5_1_4:164415907-164436651:+|nuORF	25.57405402267927	0.3484490411150625	5				NaN	NaN	0	NaN	1285	2933	4215
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4221	17.16	NaN	1307.6	30	0	370.54	0.037				-1	KLFCILSHL	9	32	377.5518798828125	NaN	0	377.5518798828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_KLFC(Carbamidomethyl (C))ILSHL_	ENSG00000183850|ENST00000597761|ZNF730	32.81241826257853	0.3119040447479903	5				NaN	NaN	0	NaN	1286	2933	4215
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4222	17.16	NaN	647.24	30	0	53.149	0.142	+			50095	WGQAWCLALV	10	36	573.7907104492188	NaN	0	573.7907104492188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_WGQAWCLALV_	ENST00000426508.6_2_16:1642283-1652410:-|nuORF	19.359975847455235	0.4201028297492154	5				NaN	NaN	0	NaN	1287	2933	4215
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4231	17.181	NaN	5216.3	30	0	1530.1	0.214	+			40219	STSEKINK	8	55	453.7477956589024	905.4810383846049	2	453.747802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STSEKINK_	ENSG00000187754|ENST00000298181|SSX7	101.60071028292904	0.24979566554663588	5				NaN	NaN	0	NaN	1293	2936	4230
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4232	17.185	NaN	917.75	30	0	104.51	0.036	+			36126	SEKQEHVKL	9	46	549.3014886861356	NaN	0	549.3016357421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEKQEHVKL_	ENSG00000204843|ENST00000628224|DCTN1;ENST00000466110.5_1_2:74595806-74598423:-|nuORF;nc|ENSG00000204843|Q14203-2|DCTN1;nc|ENSG00000204843|Q14203-3|DCTN1;nc|ENSG00000204843|Q14203-4|DCTN1;nc|ENSG00000204843|Q14203-5|DCTN1;nc|ENSG00000204843|Q14203-6|DCTN1	33.921630207806714	0.3063038642147651	5				NaN	NaN	0	NaN	1294	2936	4230
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4243	17.21	NaN	7814.4	30	0	2950.2	0.214	+			40375	STTTTQITK	9	59	490.76625043804785	979.5179479428957	2	490.7662353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STTTTQITK_	ENSG00000159023|ENST00000343067|EPB41;ENST00000462032.1_1_1:29424324-29436027:+|nuORF;nc|ENSG00000159023|P11171-2|EPB41;nc|ENSG00000159023|P11171-3|EPB41;nc|ENSG00000159023|P11171-5|EPB41;nc|ENSG00000159023|P11171-6|EPB41	93.5975768576971	0.05472259948179787	5				NaN	NaN	0	NaN	1302	2939	4242
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4244	17.214	NaN	3634.8	30	0	775.51	0.106	+			35104	SAGDVAVQK	9	54	437.735343276561	873.4561336199221	2	437.7350158691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAGDVAVQK_	ENSG00000164574|ENST00000297107|GALNT10;ENST00000517958.1_1_5:153783698-153796529:+|nuORF;ENST00000520647.5_1_5:153755841-153792087:+|nuORF;nc|ENSG00000164574|Q86SR1-2|GALNT10;nc|ENSG00000164574|Q86SR1-4|GALNT10	106.68306549817024	0.032382560583716295	5				NaN	NaN	0	NaN	1303	2939	4242
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4245	17.216	NaN	1698.2	30	0	528.81	0.106	+			15209	GTSSLTATK	9	41	433.2344065540207	864.4542601748415	2	433.2344970703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTSSLTATK_	ENSG00000141384|ENST00000269142|TAF4B	45.97224482568171	0.3502073465782774	5				NaN	NaN	0	NaN	1304	2939	4242
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4246	17.217	NaN	564.61	30	0	118.65	0.106	+			24566	LGMYLVTV	8	30	448.2530517578125	NaN	0	448.2530517578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LGMYLVTV_	ENSG00000280204|ENST00000641544|OR1S1;nc|ENSG00000280204|Q8NH92|OR1S1	26.79610172149135	1.7418937515398478	5				NaN	NaN	0	NaN	1305	2939	4242
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4247	17.219	NaN	834.04	30	0	115.03	0.106			+	10011	ERQDGGGSLT	10	41	510.24212646484375	NaN	0	510.24212646484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ERQDGGGSLT_	REV__ENSG00000047849|ENST00000683076|MAP4;REV__nc|ENSG00000047849|P27816-2|MAP4;REV__nc|ENSG00000047849|P27816-4|MAP4;REV__nc|ENSG00000047849|P27816-5|MAP4;REV__nc|ENSG00000047849|P27816|MAP4	29.170058357718403	0.40439580130713204	5				NaN	NaN	0	NaN	1306	2939	4242
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4248	17.221	NaN	573.75	30	0	167.64	0.037	+			7757	DNRTSWQLI	9	26	566.7911376953125	NaN	0	566.7911376953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DNRTSWQLI_	ENST00000477091.5_1_21:35445925-35497723:+|nuORF	23.04248740728303	0.3589936788096251	5				NaN	NaN	0	NaN	1307	2939	4242
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4262	17.251	NaN	9621.1	30	0	4414.4	0.214	+			30547	QAKQESTEY	9	62	542.2514964274777	1082.4884399217553	2	542.2515869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QAKQESTEY_	ENSG00000026025|ENST00000544301|VIM;ENST00000421459.2_2_10:17272631-17276850:+|nuORF;VIM|p.R310C|1|0.13|ENSG00000026025|chr10:17234738-17234738|C/T|missense_variant	120.30596017624542	0.02101454110788768	5				NaN	NaN	0	NaN	1318	2942	4261
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4263	17.254	NaN	2240.1	30	0	234.12	0.106	+			35982	SEHAVNKQL	9	55	513.2726277513456	1024.530702569491	2	513.2728271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEHAVNKQL_	ENSG00000166595|ENST00000422424|CIAO2B;ENST00000562362.5_1_16:66966108-66968009:-|nuORF	76.7741389293348	0.11149722112137898	5				NaN	NaN	0	NaN	1319	2942	4261
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4264	17.256	NaN	2849.7	30	0	758.38	0.106	+			29699	PHALAAALAQ	10	45	481.7759983366125	961.537443740025	2	481.7763366699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PHALAAALAQ_	ENST00000417521.5_1_6:30861115-30864801:+|nuORF	42.396135135203025	0.5270658956260207	5				NaN	NaN	0	NaN	1320	2942	4261
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4265	17.258	NaN	1426.4	30	0	312.24	0.106			+	10475	EVPSSVGRRA	10	46	529.2916434554978	NaN	0	529.2919311523438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EVPSSVGRRA_	REV__ENSG00000151746|ENST00000652176|BICD1;REV__nc|ENSG00000151746|Q96G01-3|BICD1;REV__nc|ENSG00000151746|Q96G01-4|BICD1	37.81151784470057	0.3760215235790741	5				NaN	NaN	0	NaN	1321	2942	4261
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4266	17.26	NaN	2285.1	30	0	294.34	0.106	+			33814	RQSCVMVQK	9	58	568.289219234777	1134.5638855363538	2	568.2893676757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_RQSC(Carbamidomethyl (C))VMVQK_	ENSG00000128833|ENST00000261839|MYO5C;ENST00000558902.5_1_15:52529812-52548856:-|nuORF;ENST00000560809.5_1_15:52532054-52548856:-|nuORF;MYO5C|p.E1050Sfs*8|1|0.32|ENSG00000128833|chr15:52229192-52229192|C/-|frameshift_variant;MYO5C|p.L1151Wfs*19|1|0.17|ENSG00000128833|chr15:52223719-52223719|A/-|frameshift_variant;MYO5C|p.L933Hfs*33|1|0.04|ENSG00000128833|chr15:52237552-52237553|-/T|frameshift_variant;MYO5C|p.L933Sfs*35|1|0.04|ENSG00000128833|chr15:52237553-52237554|-/AAGTGGA|frameshift_variant	56.43379154798735	0.2433427591689151	5				NaN	NaN	0	NaN	1322	2942	4261
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4267	17.262	NaN	825.01	30	0	121.9	0.035	+			8008	DTLRGTNPI	9	30	493.7667071221351	985.5188613110702	2	493.76580810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DTLRGTNPI_	tr|U7SHJ2|U7SHJ2_FUSNUAutotransporterdomain-containingprotein(Fragment)OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02176PE=4SV=1	39.252832667884924	0.4290233611298554	5				NaN	NaN	0	NaN	1323	2942	4261
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4268	17.262	NaN	2007.3	30	0	795.86	0.141			+	20740	KGTSARRLTV	10	37	544.8324051372247	1087.6502573412492	2	545.33447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KGTSARRLTV_	REV__ENSG00000167100|ENST00000330175|SAMD14;REV__ENST00000508892.5_1_17:48190259-48195083:-|nuORF;REV__nc|ENSG00000167100|Q8IZD0-2|SAMD14;REV__SAMD14|p.S286Afs*67|1|0.49|ENSG00000167100|chr17:50114274-50114274|G/-|frameshift_variant	32.03412808689991	0.6182276479942341	5				NaN	NaN	0	NaN	1324	2942	4261
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4281	17.291	NaN	6855.9	30	0	2223	0.214	+			20129	KEKLSKSE	8	66	474.77163141519515	947.5287098971903	2	474.7713317871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEKLSKSE_	CASP8AP2|p.D1810Mfs*3|1|0.43|ENSG00000118412|chr6:89868711-89868711|A/-|frameshift_variant;CASP8AP2|p.E1628Mfs*58|1|0.49|ENSG00000118412|chr6:89868163-89868164|-/AT|frameshift_variant;CASP8AP2|p.N1236Ifs*9|1|0.3|ENSG00000118412|chr6:89866990-89866990|A/-|frameshift_variant;CASP8AP2|p.N1917Kfs*4|1|0.24|ENSG00000118412|chr6:89869034-89869035|-/A|frameshift_variant;ENSG00000118412|ENST00000551025|CASP8AP2;ENST00000237177.10_1_6:90556308-90583533:+|nuORF;nc|ENSG00000118412|Q9UKL3|CASP8AP2	99.37495909608758	0.2510236104623939	5				NaN	NaN	0	NaN	1334	2945	4280
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4282	17.295	NaN	3450.7	30	0	310.06	0.106	+			38283	SQQKVVITK	9	61	515.8161619161004	1029.6177708990008	2	515.8165893554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SQQKVVITK_	ENSG00000007952|ENST00000372966|NOX1;ENSG00000165168|ENST00000378588|CYBB;nc|ENSG00000007952|Q9Y5S8-3|NOX1;NOX1|p.R290H|1|0.17|ENSG00000007952|chrX:100851261-100851261|C/T|missense_variant	122.93914200107957	0.019420478173996256	5				NaN	NaN	0	NaN	1335	2945	4280
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4283	17.297	NaN	1464.2	30	0	262.92	0.036	+			21412	KMRSDLLLE	9	56	552.8077145309663	1103.6008761287326	2	552.830810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KMRSDLLLE_	ENSG00000133392|ENST00000300036|MYH11;nc|ENSG00000133392|P35749-2|MYH11;nc|ENSG00000133392|P35749-3|MYH11;nc|ENSG00000133392|P35749-4|MYH11	58.78195531508484	0.22376836668196862	5				NaN	NaN	0	NaN	1336	2945	4280
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4297	17.327	NaN	5616.7	30	0	2652.1	0.144			+	14502	GTCMAQAKR	9	28	341.49932841906235	1021.4761558573871	3	341.4991455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GTC(Carbamidomethyl (C))MAQAKR_	REV__ENSG00000189280|ENST00000338513|GJB5	40.77816245573522	0.41113185337114944	5				NaN	NaN	0	NaN	1347	2948	4296
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4311	17.359	NaN	5560.8	30	0	805.89	0.214	+			22100	KSMNANTITK	10	72	554.2955712114508	1106.5765894897015	2	554.2962036132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSMNANTITK_	ENSG00000175467|ENST00000312397|SART1	95.4829727501206	0.09968275784893506	5				NaN	NaN	0	NaN	1358	2951	4310
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4312	17.362	NaN	4042.2	30	0	893.27	0.106	+			37406	SLGGHSISK	9	56	443.2436436949932	884.4727344567864	2	443.24334716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLGGHSISK_	ENSG00000189144|ENST00000536220|ZNF573;ZNF573|p.V65L|1|0.4|ENSG00000189144|chr19:37771573-37771573|C/A|missense_variant	104.0567914643314	0.03506238181059741	5				NaN	NaN	0	NaN	1359	2951	4310
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4313	17.364	NaN	1401.1	30	0	362.67	0.106			+	7735	DLVQYVQHRH	10	38	432.2274169921875	NaN	0	432.2274169921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DLVQYVQHRH_	REV__ENST00000541717.4_2_9:36651834-36665384:+|nuORF	23.52269567125451	0.42010282974921537	5				NaN	NaN	0	NaN	1360	2951	4310
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4314	17.366	NaN	2251.8	30	0	216.1	0.106	+			21409	KMRMAKKK	8	40	346.20759486890086	NaN	0	345.873291015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_KMRM(Oxidation (M))AKKK_	TRPM1|p.T760Pfs*110|2|0.19|ENSG00000134160|chr15:31038140-31038140|G/-|frameshift_variant	49.44154591367651	1.7418937515398478	5				NaN	NaN	0	NaN	1361	2951	4310
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4315	17.368	NaN	1157.3	30	0	118.47	0.036	+			13721	GPWLEVPPSP	10	66	539.7835083007812	NaN	0	539.7835083007812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GPWLEVPPSP_	TECPR1|p.I932Sfs*105|1|0.13|ENSG00000205356|chr7:98223125-98223125|G/-|frameshift_variant	34.172542307311794	0.38797011891751465	5				NaN	NaN	0	NaN	1362	2951	4310
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4329	17.397	NaN	2706.2	30	0	611.75	0.214	+			12320	GDGPIKSK	8	45	401.2272010489153	800.4398491646306	2	401.22705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GDGPIKSK_	ENSG00000120156|ENST00000380036|TEK;nc|ENSG00000120156|Q02763-2|TEK;nc|ENSG00000120156|Q02763-3|TEK;TEK|p.E624Nfs*33|1|0.41|ENSG00000120156|chr9:27197556-27197556|G/-|frameshift_variant;TEK|p.N809Tfs*21|1|0.22|ENSG00000120156|chr9:27206639-27206639|A/-|frameshift_variant;TEK|p.N884Kfs*6|1|0.16|ENSG00000120156|chr9:27209197-27209197|C/-|frameshift_variant;TEK|p.S586Vfs*12|1|0.27|ENSG00000120156|chr9:27197441-27197441|A/-|frameshift_variant	31.529811441608018	0.715883593221515	5				NaN	NaN	0	NaN	1373	2954	4328
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4330	17.4	NaN	3500.4	30	0	553.05	0.106	+			9911	EQQSELRL	8	65	501.7648504086167	1001.5151478840335	2	501.7564697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EQQSELRL_	SRGAP3|p.S41L|1|0.31|ENSG00000196220|chr3:9124863-9124863|G/A|missense_variant	64.20726635412375	0.4601301477144759	5				NaN	NaN	0	NaN	1374	2954	4328
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4331	17.402	NaN	7973.4	30	0	1387.4	0.106	+			44703	TTKHYVIIHQ	10	56	413.89851414242867	1238.673713027486	3	413.8986511230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TTKHYVIIHQ_	ENSG00000256087|ENST00000221315|ZNF432	38.753607047826485	0.5606299674732264	5				NaN	NaN	0	NaN	1375	2954	4328
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4332	17.404	NaN	5622.5	30	0	1098	0.106	+			44797	TTQRPLHINK	10	52	403.235499169557	1206.684668108871	3	403.5699462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TTQRPLHINK_	CACNA1C|p.A2072Pfs*18|1|0.55|ENSG00000151067|chr12:2688729-2688729|G/-|frameshift_variant;CACNA1C|p.P2073Qfs*17|1|0.21|ENSG00000151067|chr12:2688733-2688733|C/-|frameshift_variant;ENSG00000151067|ENST00000399655|CACNA1C;nc|ENSG00000151067|Q13936-10|CACNA1C;nc|ENSG00000151067|Q13936-11|CACNA1C;nc|ENSG00000151067|Q13936-13|CACNA1C;nc|ENSG00000151067|Q13936-14|CACNA1C;nc|ENSG00000151067|Q13936-15|CACNA1C;nc|ENSG00000151067|Q13936-16|CACNA1C;nc|ENSG00000151067|Q13936-17|CACNA1C;nc|ENSG00000151067|Q13936-18|CACNA1C;nc|ENSG00000151067|Q13936-19|CACNA1C;nc|ENSG00000151067|Q13936-2|CACNA1C;nc|ENSG00000151067|Q13936-20|CACNA1C;nc|ENSG00000151067|Q13936-21|CACNA1C;nc|ENSG00000151067|Q13936-22|CACNA1C;nc|ENSG00000151067|Q13936-23|CACNA1C;nc|ENSG00000151067|Q13936-24|CACNA1C;nc|ENSG00000151067|Q13936-25|CACNA1C;nc|ENSG00000151067|Q13936-26|CACNA1C;nc|ENSG00000151067|Q13936-27|CACNA1C;nc|ENSG00000151067|Q13936-28|CACNA1C;nc|ENSG00000151067|Q13936-29|CACNA1C;nc|ENSG00000151067|Q13936-3|CACNA1C;nc|ENSG00000151067|Q13936-30|CACNA1C;nc|ENSG00000151067|Q13936-31|CACNA1C;nc|ENSG00000151067|Q13936-32|CACNA1C;nc|ENSG00000151067|Q13936-33|CACNA1C;nc|ENSG00000151067|Q13936-34|CACNA1C;nc|ENSG00000151067|Q13936-35|CACNA1C;nc|ENSG00000151067|Q13936-36|CACNA1C;nc|ENSG00000151067|Q13936-37|CACNA1C;nc|ENSG00000151067|Q13936-4|CACNA1C;nc|ENSG00000151067|Q13936-5|CACNA1C;nc|ENSG00000151067|Q13936-6|CACNA1C;nc|ENSG00000151067|Q13936-7|CACNA1C;nc|ENSG00000151067|Q13936-8|CACNA1C;nc|ENSG00000151067|Q13936-9|CACNA1C;nc|ENSG00000151067|Q13936|CACNA1C	82.7504851949679	0.1731497355276012	5				NaN	NaN	0	NaN	1376	2954	4328
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4333	17.406	NaN	1089.5	30	0	228.72	0.038			+	43651	TISERPIKPF	10	44	396.5628662109375	NaN	0	396.5628662109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TISERPIKPF_	REV__ENST00000415609.6_1_3:69110996-69111038:-|nuORF	28.081489160057373	0.40797012399963245	5				NaN	NaN	0	NaN	1377	2954	4328
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4342	17.426	NaN	3656.9	30	0	740.78	0.214			+	9003	EGAAIKREE	9	70	501.7648504086167	1001.5151478840335	2	501.7646789550781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EGAAIKREE_	REV__ENSG00000086288|ENST00000199447|NME8;REV__NME8|p.R175Kfs*15|1|0.35|ENSG00000086288|chr7:37864412-37864413|-/A|frameshift_variant	74.25504064058377	0.12238981753128622	5				NaN	NaN	0	NaN	1383	2957	4341
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4343	17.43	NaN	5281.8	30	0	884.83	0.106	+			21871	KRMAQKTQ	8	65	495.77731578149087	989.5400786297818	2	495.7773742675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KRMAQKTQ_	ENSG00000138785|ENST00000340139|INTS12	87.75429964447693	0.2842685068779738	5				NaN	NaN	0	NaN	1384	2957	4341
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4344	17.432	NaN	4858.5	30	0	552.8	0.106			+	-1	ICPGKRQIR	9	47	376.55347164872796	1126.6385855463839	3	376.5536193847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_IC(Carbamidomethyl (C))PGKRQIR_	REV__ENST00000438116.2_1_22:40983245-40983449:-|nuORF	26.69291269510374	0.5537881896960711	5				NaN	NaN	0	NaN	1385	2957	4341
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4345	17.433	NaN	1704.2	30	0	1091.2	0.106	+			15845	GWQNSVVLQ	9	32	515.7683238562782	NaN	0	515.7684936523438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GWQNSVVLQ_	COL12A1|p.R1804W|1|0.17|ENSG00000111799|chr6:75134840-75134840|G/A|missense_variant	24.20275056022122	0.35506675290109213	5				NaN	NaN	0	NaN	1386	2957	4341
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4346	17.435	NaN	1901.7	30	0	499.06	0.036				-1	VVFLPALCP	9	29	339.19430666276315	NaN	0	339.1943054199219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_VVFLPALC(Carbamidomethyl (C))P_	ENST00000446956.1_1_1:146695579-146695888:+|nuORF	21.9598887501803	0.3626577482100488	5				NaN	NaN	0	NaN	1387	2957	4341
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4356	17.457	NaN	8312.4	30	0	2006.4	0.214			+	32119	QSKLSLKGA	9	68	466.2820184593791	930.5494839855583	2	466.28192138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QSKLSLKGA_	REV__ZNF33A|p.E689Rfs*83|1|0.35|ENSG00000189180|chr10:38056188-38056188|G/-|frameshift_variant	77.31757898189308	0.1091473830098891	5				NaN	NaN	0	NaN	1394	2960	4355
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4357	17.461	NaN	4736.7	30	0	938.72	0.106	+			40056	STNNIAQAR	9	55	487.75464196053844	973.4947309878769	2	487.75396728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STNNIAQAR_	ENSG00000172380|ENST00000370982|GNG12;GNG12|p.F63Efs*8|1|0.1|ENSG00000172380|chr1:67705483-67705484|-/GAGATTTACCTTC|frameshift_variant	126.24258497203832	0.01742065577488747	5				NaN	NaN	0	NaN	1395	2960	4355
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4358	17.463	NaN	3746.9	30	0	975.67	0.106				-1	MTNEKTTK	8	48	484.73989875500735	967.4652445768147	2	484.7396240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))TNEKTTK_	chr10:128113602-128116491|398|11.56|0.71|4.03|-|ENST00000368653|MKI67,MKI67;ENSG00000148773|ENST00000368654|MKI67;MKI67|p.L2374*|1|0.28|ENSG00000148773|chr10:128104719-128104719|A/-|frameshift_variant;MKI67|p.R3036Yfs*27|1|0.04|ENSG00000148773|chr10:128102735-128102736|-/AAAATAA|frameshift_variant;nc|ENSG00000148773|P46013-2|MKI67	40.77816245573522	0.6514838689002179	5				NaN	NaN	0	NaN	1396	2960	4355
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4359	17.464	NaN	1822.7	30	0	292.38	0.036			+	-1	KNRYCAIE	8	57	527.2612609863511	1052.507969039502	2	527.7620239257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_KNRYC(Carbamidomethyl (C))AIE_	REV__ENST00000423945.5_1_7:72300234-72302185:+|nuORF;REV__ENST00000437201.5_1_7:72300234-72301326:+|nuORF;REV__ENST00000456312.5_1_7:72300234-72300363:+|nuORF	57.81127852772723	0.5234495074909924	5				NaN	NaN	0	NaN	1397	2960	4355
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4371	17.49	NaN	4600.1	30	0	926.66	0.214				-1	 	0	65	470.26707551495826	938.5195980967165	2	470.26678466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1406	2963	4370
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4372	17.494	NaN	4132.4	30	0	721.79	0.106			+	12441	GEATPIHP	8	47	411.21150934238386	820.4084657515677	2	411.2115783691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEATPIHP_	REV__ENST00000477553.1_1_9:124091151-124091454:+|nuORF	44.53106598305862	0.628196326904373	5				NaN	NaN	0	NaN	1407	2963	4370
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4373	17.495	NaN	4060	30	0	1069.4	0.036			+	31213	QGRWKGRPT	9	62	543.3019729301969	1084.5893929271938	2	543.3023681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QGRWKGRPT_	REV__ENSG00000141524|ENST00000590602|TMC6;REV__ENST00000586271.1_1_17:76120592-76121921:-|nuORF;REV__ENST00000588087.5_1_17:76116732-76122925:-|nuORF;REV__nc|ENSG00000141524|Q7Z403-2|TMC6;REV__TMC6|p.G239Afs*77|1|0.26|ENSG00000141524|chr17:78124699-78124699|C/-|frameshift_variant;REV__TMC6|p.Y488Tfs*67|1|0.39|ENSG00000141524|chr17:78121087-78121087|G/-|frameshift_variant	61.691277971877994	0.19951612995419254	5				NaN	NaN	0	NaN	1408	2963	4370
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4386	17.523	NaN	2254.7	30	0	294.16	0.214	+			18566	ISNSSTLGGQ	10	54	482.2409852836395	962.467417634079	2	482.2409973144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ISNSSTLGGQ_	nc|ENSG00000137177|Q9H1H9-5|KIF13A	56.43379154798735	0.3982744522255666	5				NaN	NaN	0	NaN	1418	2966	4385
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4387	17.526	NaN	2077.4	30	0	200.09	0.106	+			69	AAASTLVHK	9	53	449.2615043470662	896.5084557609324	2	449.2613220214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAASTLVHK_	ENSG00000115421|ENST00000238714|PAPOLG;ENST00000453839.5_1_2:61002191-61018944:+|nuORF;ENST00000496283.5_1_2:61002191-61021341:+|nuORF;nc|ENSG00000115421|Q9BWT3-2|PAPOLG;PAPOLG|p.R682Kfs*18|2|0.34|ENSG00000115421|chr2:60794759-60794760|-/A|frameshift_variant;PAPOLG|p.T602Lfs*8|1|0.46|ENSG00000115421|chr2:60794000-60794000|C/-|frameshift_variant	62.107414245175825	0.1960472003779324	5				NaN	NaN	0	NaN	1419	2966	4385
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4388	17.528	NaN	1025.8	30	0	206.84	0.034	+			24655	LGTRGMASR	9	40	474.75424745386096	NaN	0	474.7543029785156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LGTRGMASR_	nc|ENSG00000146729|O75323-2|NIPSNAP2	37.81151784470057	0.28666463014928195	5				NaN	NaN	0	NaN	1420	2966	4385
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4400	17.554	NaN	22128	30	0	5720.4	0.214	+			38226	SQKLEARCRG	10	74	402.21220359701	1203.61478139123	3	402.2123718261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SQKLEARC(Carbamidomethyl (C))RG_	ENST00000399640.3_1_8:134471412-134471994:-|nuORF	49.536043120802724	0.461275219792494	5				NaN	NaN	0	NaN	1429	2969	4399
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4401	17.558	NaN	3994.7	30	0	2300.7	0.106	+			41117	SVISHQHLSK	10	39	379.21231098836563	1134.615103565297	3	379.2122802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVISHQHLSK_	ENSG00000164749|ENST00000396423|HNF4G;nc|ENSG00000164749|Q14541-2|HNF4G;nc|ENSG00000164749|Q14541|HNF4G	36.446750945000026	0.5818864909973037	5				NaN	NaN	0	NaN	1430	2969	4399
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4402	17.559	NaN	3600.3	30	0	1894.4	0.106	+			46883	VIMVTIDYLV	10	39	389.22195142101066	1164.644024863232	3	389.22198486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VIMVTIDYLV_	ENSG00000033867|ENST00000454389|SLC4A7;nc|ENSG00000033867|Q9Y6M7-12|SLC4A7;nc|ENSG00000033867|Q9Y6M7-13|SLC4A7;nc|ENSG00000033867|Q9Y6M7-2|SLC4A7;nc|ENSG00000033867|Q9Y6M7-3|SLC4A7;nc|ENSG00000033867|Q9Y6M7-4|SLC4A7;nc|ENSG00000033867|Q9Y6M7-5|SLC4A7;nc|ENSG00000033867|Q9Y6M7-6|SLC4A7;nc|ENSG00000033867|Q9Y6M7-8|SLC4A7;nc|ENSG00000033867|Q9Y6M7-9|SLC4A7;nc|ENSG00000033867|Q9Y6M7|SLC4A7;SLC4A7|p.L1003Wfs*11|1|0.39|ENSG00000033867|chr3:27394600-27394600|A/-|frameshift_variant;SLC4A7|p.S1176Kfs*13|1|0.68|ENSG00000033867|chr3:27383191-27383192|-/C|frameshift_variant	24.519189625965996	0.6795976720565101	5				NaN	NaN	0	NaN	1431	2969	4399
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4403	17.561	NaN	6100	30	0	1572.7	0.106	+			49181	VVMRDPNTK	9	63	530.2841775207287	1058.5538021082573	2	530.2850952148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVMRDPNTK_	chr12:54282662-54282800|482|460.96|0.0|25.46|+|ENST00000677249|HNRNPA1,HNRNPA1;ENSG00000135486|ENST00000340913|HNRNPA1;ENSG00000139675|ENST00000357495|HNRNPA1L2;ENSG00000224578|ENST00000565308|HNRNPA1L3;ENST00000441603.1_1_11:5593122-5593311:-|nuORF;ENST00000452488.1_1_2:41383770-41384067:+|nuORF;ENST00000457695.2_1_X:100110922-100111255:-|nuORF;ENST00000575692.1_1_17:2210089-2210875:+|nuORF;nc|ENSG00000135486|P09651-2|HNRNPA1;nc|ENSG00000135486|P09651-3|HNRNPA1	61.76455937419982	0.19890525308472518	5				NaN	NaN	0	NaN	1432	2969	4399
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4404	17.563	NaN	1784.2	30	0	266.68	0.036	+			40518	STYSSQIRK	9	59	535.2852866116007	1068.5560202900012	2	535.2863159179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STYSSQIRK_	ENST00000469130.5_1_1:201751782-201763782:+|nuORF;nc|ENSG00000134369|Q8NEY1-2|NAV1;nc|ENSG00000134369|Q8NEY1-6|NAV1;nc|ENSG00000134369|Q8NEY1-7|NAV1	78.26377905018397	0.10505600812668463	5				NaN	NaN	0	NaN	1433	2969	4399
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4413	17.583	NaN	10482	30	0	5588.2	0.214	+			49182	VVMRDPNTK	9	36	353.85866092088673	1058.5541533628602	3	353.8586730957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVMRDPNTK_	chr12:54282662-54282800|482|460.96|0.0|25.46|+|ENST00000677249|HNRNPA1,HNRNPA1;ENSG00000135486|ENST00000340913|HNRNPA1;ENSG00000139675|ENST00000357495|HNRNPA1L2;ENSG00000224578|ENST00000565308|HNRNPA1L3;ENST00000441603.1_1_11:5593122-5593311:-|nuORF;ENST00000452488.1_1_2:41383770-41384067:+|nuORF;ENST00000457695.2_1_X:100110922-100111255:-|nuORF;ENST00000575692.1_1_17:2210089-2210875:+|nuORF;nc|ENSG00000135486|P09651-2|HNRNPA1;nc|ENSG00000135486|P09651-3|HNRNPA1	41.42661286455405	0.403525789677298	5				NaN	NaN	0	NaN	1439	2972	4412
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4414	17.587	NaN	2665.5	30	0	476.72	0.106	+			19996	KEIEGVTKT	9	53	502.784376871353	1003.554200809506	2	502.7844543457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEIEGVTKT_	ENSG00000131558|ENST00000253861|EXOC4	104.0567914643314	0.03506238181059741	5				NaN	NaN	0	NaN	1440	2972	4412
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4415	17.589	NaN	1780.3	30	0	467.64	0.106	+			40749	SVDGPVSQK	9	41	458.7402399589563	915.4659269847126	2	458.74017333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVDGPVSQK_	ENSG00000119231|ENST00000323460|SENP5;nc|ENSG00000119231|Q96HI0-2|SENP5	52.936696900407355	0.27249468807391813	5				NaN	NaN	0	NaN	1441	2972	4412
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4416	17.59	NaN	7478.1	30	0	2774.4	0.106	+			44607	TTDRYIQQK	9	50	384.87182824602814	1151.5936553382844	3	384.8714904785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TTDRYIQQK_	ENSG00000149480|ENST00000278823|MTA2;MTA2|p.A568Qfs*29|1|0.23|ENSG00000149480|chr11:62594402-62594402|T/-|frameshift_variant;MTA2|p.I556Hfs*8|1|0.29|ENSG00000149480|chr11:62594543-62594544|-/C|frameshift_variant;nc|ENSG00000149480|O94776-2|MTA2	37.81151784470057	0.4459294069877048	5				NaN	NaN	0	NaN	1442	2972	4412
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4417	17.592	NaN	1526.9	30	0	206.41	0.035			+	7885	DRQLGKEAQ	9	60	522.7766452055596	NaN	0	522.7776489257812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DRQLGKEAQ_	REV__ENSG00000176438|ENST00000682763|SYNE3;REV__ENST00000555759.1_1_14:95904955-95916441:-|nuORF;REV__nc|ENSG00000176438|Q6ZMZ3-2|SYNE3;REV__nc|ENSG00000176438|Q6ZMZ3-3|SYNE3	29.170058357718403	0.3302935627494407	5				NaN	NaN	0	NaN	1443	2972	4412
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4429	17.618	NaN	8910	30	0	4844	0.211			+	36752	SHHEAMRPNWG	11	72	669.2948848181168	1336.5752167030334	2	669.294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_SHHEAM(Oxidation (M))RPNWG_	REV__ENST00000507229.5_1_1:1551767-1563881:+|nuORF;REV__nc|ENSG00000197530|Q96AX9-6|MIB2	65.46538089061403	0.2746690761028526	5				NaN	NaN	0	NaN	1452	2975	4428
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4430	17.621	NaN	5663.9	30	0	1077.3	0.106			+	31681	QNKKVVKEQI	10	50	405.24702587154354	1212.7192482148307	3	405.2469482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QNKKVVKEQI_	REV__ENSG00000139734|ENST00000400324|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-4|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-5|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-6|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-7|DIAPH3	40.05817265558897	0.5486090488315611	5				NaN	NaN	0	NaN	1453	2975	4428
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4431	17.623	NaN	3959.4	30	0	419.53	0.106			+	-1	SAWCRCASPSR	11	54	446.5326185215446	1336.5760261648338	3	446.5321350097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_SAWC(Carbamidomethyl (C))RC(Carbamidomethyl (C))ASPSR_	REV__SLC46A2|p.L90Cfs*53|1|0.25|ENSG00000119457|chr9:112890414-112890414|G/-|frameshift_variant	37.59989570853033	0.5907838038483115	5				NaN	NaN	0	NaN	1454	2975	4428
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4432	17.625	NaN	1210.5	30	0	154.52	0.106	+			29647	PGLAARGA	8	40	356.70870446102873	711.4028559888575	2	356.7084655761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PGLAARGA_	ENST00000375749.7_1_20:30822509-30822659:+|nuORF	52.29916861842294	0.578018602984656	5				NaN	NaN	0	NaN	1455	2975	4428
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4433	17.627	NaN	1662.2	30	0	264.73	0.106	+			38267	SQNTDMVQK	9	54	525.7477171419494	1049.4808813506986	2	525.2786865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SQNTDMVQK_	ENSG00000113282|ENST00000411809|CLINT1	72.87924865735499	0.12833875048249987	5				NaN	NaN	0	NaN	1456	2975	4428
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4434	17.629	NaN	936.47	30	0	181.32	0.106	+			29773	PIDVAMSS	8	34	410.1979675292969	NaN	0	410.1979675292969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PIDVAMSS_	ASB5|p.T274M|1|0.28|ENSG00000164122|chr4:176216859-176216859|G/A|missense_variant	20.481830146152948	1.741893751539848	5				NaN	NaN	0	NaN	1457	2975	4428
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4435	17.631	NaN	585.98	30	0	97.165	0.036			+	33817	RQSPSVNKE	9	27	348.8522644042969	NaN	0	348.8522644042969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RQSPSVNKE_	REV__nc|ENSG00000118816|Q14094-2|CCNI	14.864876125193954	0.3866709117995958	5				NaN	NaN	0	NaN	1458	2975	4428
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4452	17.666	NaN	21290	30	0	3507.5	0.214	+			38268	SQNTDMVQK	9	78	525.7477171419494	1049.4808813506986	2	525.7484741210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SQNTDMVQK_	ENSG00000113282|ENST00000411809|CLINT1	117.5257442709337	0.022697614825424036	5				NaN	NaN	0	NaN	1472	2978	4451
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4453	17.669	NaN	2689.2	30	0	531.2	0.106	+			13984	GSAVSTVTK	9	44	425.2373871469884	NaN	0	425.23748779296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSAVSTVTK_	ENSG00000183963|ENST00000333137|SMTN;ENST00000460658.5_1_22:31492537-31495228:+|nuORF;ENST00000489337.5_1_22:31484532-31494796:+|nuORF;ENST00000493335.5_1_22:31492537-31494796:+|nuORF;nc|ENSG00000183963|P53814-2|SMTN;nc|ENSG00000183963|P53814-6|SMTN;nc|ENSG00000183963|P53814|SMTN	63.53385203322761	0.134247007536971	5				NaN	NaN	0	NaN	1473	2978	4451
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4454	17.671	NaN	2387.1	30	0	216.47	0.106			+	45698	VAAHKELG	8	52	412.73506162323423	NaN	0	412.735107421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VAAHKELG_	REV__ENST00000334801.7_1_11:118781174-118781492:-|nuORF	68.484700416344	1.7418937515398478	5				NaN	NaN	0	NaN	1474	2978	4451
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4455	17.673	NaN	2429.6	30	0	229.27	0.106	+			34323	RTNEVVAIKK	10	45	386.5716857910156	NaN	0	386.5716857910156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RTNEVVAIKK_	ENSG00000160551|ENST00000261716|TAOK1;nc|ENSG00000160551|Q7L7X3-3|TAOK1;TAOK1-VMP1|1|fusion	28.081489160057373	0.40797012399963245	5				NaN	NaN	0	NaN	1475	2978	4451
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4456	17.675	NaN	2191	30	0	398.61	0.106			+	1538	AGCLLRGDG	9	54	431.21600813674814	860.4174633402963	2	431.21624755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AGCLLRGDG_	REV__ENSG00000164099|ENST00000296498|PRSS12	49.44154591367651	0.3095138337212152	5				NaN	NaN	0	NaN	1476	2978	4451
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4457	17.677	NaN	5847.6	30	0	2732.2	0.033	+			14232	GSSSASIVK	9	40	418.2295743520746	834.4445957709493	2	418.2298278808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GSSSASIVK_	DSG2|p.I845*|1|0.27|ENSG00000046604|chr18:31545914-31545914|A/-|frameshift_variant;ENSG00000046604|ENST00000261590|DSG2	67.49366992349736	0.1516260258713357	5				NaN	NaN	0	NaN	1477	2978	4451
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4458	17.677	NaN	1493.5	30	0	712.89	0.144			+	-1	GIFTTLMG	8	34	428.2167663574219	NaN	0	428.2167663574219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_GIFTTLM(Oxidation (M))G_	REV__tr|U7T084|U7T084_FUSNUEamAdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00768PE=4SV=1	28.2542754592877	1.7418937515398478	5				NaN	NaN	0	NaN	1478	2978	4451
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4476	17.717	NaN	10633	30	0	1509.6	0.214	+			3716	ATAASSSSLEK	11	73	526.2668308230805	1050.5191087129608	2	526.2674560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATAASSSSLEK_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENST00000417985.1_1_X:46147855-46148119:-|nuORF;ENST00000418987.2_1_9:103493819-103494230:+|nuORF;ENST00000423183.1_1_3:12112396-12112453:+|nuORF;ENST00000450451.1_1_1:238090483-238090852:+|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2	128.3478880297481	0.0041339947484058445	5				NaN	NaN	0	NaN	1493	2981	4475
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4477	17.72	NaN	31904	30	0	16356	0.106	+			15780	GVTRVTIRK	9	64	343.8890286363677	1028.6452565093032	3	343.88909912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GVTRVTIRK_	ENSG00000196531|ENST00000454682|NACA;ENST00000419462.1_1_8:102381113-102381542:+|nuORF;nc|ENSG00000196531|E9PAV3-2|NACA;nc|ENSG00000196531|Q13765|NACA;nc|ENSG00000228224|Q9BZK3|NACA4P	104.01359247289065	0.03510646158778409	5				NaN	NaN	0	NaN	1494	2981	4475
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4478	17.722	NaN	3011.8	30	0	512.95	0.106	+			40063	STNNMAYNK	9	62	521.7346665635127	1041.4547801938254	2	521.7352905273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STNNMAYNK_	ENSG00000163110|ENST00000317968|PDLIM5	107.00750918261382	0.032051501805654005	5				NaN	NaN	0	NaN	1495	2981	4475
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4479	17.724	NaN	3523	30	0	1697.8	0.106			+	9825	EPHAKDQTR	9	55	541.2738140440082	1080.5330751548163	2	541.274658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EPHAKDQTR_	REV__TRAF1|p.E75D|1|0.16|ENSG00000056558|chr9:120923708-120923708|C/A|missense_variant	34.172542307311794	0.4838870758800184	5				NaN	NaN	0	NaN	1496	2981	4475
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4480	17.726	NaN	6218.3	30	0	867.08	0.106	+			31696	QNLLNQAASQP	11	69	592.3070582328544	1182.5995635325087	2	592.30712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QNLLNQAASQP_	ENSG00000198718|ENST00000361462|TOGARAM1;nc|ENSG00000198718|Q9Y4F4|TOGARAM1	53.08895987439943	0.38514566451266113	5				NaN	NaN	0	NaN	1497	2981	4475
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4481	17.728	NaN	20271	30	0	10427	0.04	+			27240	MENAEQRKMEA	11	79	697.8057671220331	1393.596981310866	2	697.8056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))M(Oxidation (M))ENAEQRKMEA_	ENST00000371160.5_1_X:123095175-123095259:+|nuORF	61.691277971877994	0.30835813808799384	5				NaN	NaN	0	NaN	1498	2981	4475
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4482	17.728	NaN	650.27	30	0	105.24	0.143	+			9664	ELSSIAALSQ	10	38	509.774658203125	NaN	0	509.774658203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ELSSIAALSQ_	ENSG00000133958|ENST00000695012|UNC79;nc|ENSG00000133958|Q9P2D8-2|UNC79;nc|ENSG00000133958|Q9P2D8-3|UNC79;nc|ENSG00000133958|Q9P2D8|UNC79;UNC79|p.F2181Lfs*10|2|0.33|ENSG00000133958|chr14:93655372-93655372|T/-|frameshift_variant	44.377184641726394	0.34115073642966565	5				NaN	NaN	0	NaN	1499	2981	4475
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4497	17.762	NaN	24004	30	0	4075.5	0.214	+			1509	AGAALTLGAR	10	82	450.7666108898442	899.5186688464884	2	450.7665100097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AGAALTLGAR_	ENST00000304031.7_1_2:20818438-20818750:-|nuORF	52.936696900407355	0.4300801048568001	5				NaN	NaN	0	NaN	1511	2984	4496
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4498	17.765	NaN	10005	30	0	3801.6	0.106			+	-1	ASWCIYQLI	9	47	385.1948559115272	1152.5627383347817	3	385.1949157714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_ASWC(Carbamidomethyl (C))IYQLI_	REV__ENST00000394332.5_1_17:37004194-37006388:-|nuORF	39.252832667884924	0.4290233611298554	5				NaN	NaN	0	NaN	1512	2984	4496
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4499	17.767	NaN	10984	30	0	2321	0.106	+			4397	ATHTAFVAK	9	68	473.2611702535845	944.507787573969	2	473.2610168457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATHTAFVAK_	nc|ENSG00000120802|P42166|TMPO	87.69643885390035	0.07135982304947239	5				NaN	NaN	0	NaN	1513	2984	4496
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4500	17.769	NaN	849.91	30	0	196.43	0.106	+			19635	KDKEGTPPL	9	31	492.77166748046875	NaN	0	492.77166748046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KDKEGTPPL_	ENSG00000118058|ENST00000534358|KMT2A;KMT2A|p.E1318Kfs*38|1|0.28|ENSG00000118058|chr11:118482028-118482028|A/-|frameshift_variant;KMT2A|p.K1773Sfs*47|1|0.26|ENSG00000118058|chr11:118494727-118494727|A/-|frameshift_variant;KMT2A|p.K1938Sfs*43|1|0.42|ENSG00000118058|chr11:118498386-118498386|A/-|frameshift_variant;KMT2A|p.L3197Wfs*15|1|0.31|ENSG00000118058|chr11:118505488-118505488|T/-|frameshift_variant;KMT2A|p.P1289Ffs*68|1|0.17|ENSG00000118058|chr11:118481943-118481944|-/GT|frameshift_variant;KMT2A|p.Q384Ffs*6|1|0.04|ENSG00000118058|chr11:118472308-118472309|-/TTTC|frameshift_variant;KMT2A|p.Q554Sfs*13|1|0.43|ENSG00000118058|chr11:118472814-118472814|C/-|frameshift_variant;nc|ENSG00000118058|Q03164-2|KMT2A;nc|ENSG00000118058|Q03164|KMT2A	19.996771675451527	0.3693019437812985	5				NaN	NaN	0	NaN	1514	2984	4496
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4501	17.771	NaN	10041	30	0	1594.2	0.106	+			40205	STSCPVVQK	9	67	503.25501568447106	1004.4954784357421	2	503.2556457519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_STSC(Carbamidomethyl (C))PVVQK_	ENSG00000130935|ENST00000253247|NOL11;ENST00000583108.5_1_17:65733963-65734484:+|nuORF	162.25246889848123	0.0040893836092247005	5				NaN	NaN	0	NaN	1515	2984	4496
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4502	17.773	NaN	1832.5	30	0	516.08	0.04			+	31665	QNFGEMPQYIE	11	31	678.3004150390625	NaN	0	678.3004150390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QNFGEMPQYIE_	REV__tr|U7SMN6|U7SMN6_FUSNUExtracellularproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01761PE=4SV=1	22.579656572578934	0.456735970842152	5				NaN	NaN	0	NaN	1516	2984	4496
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4503	17.773	NaN	1931.8	30	0	410.59	0.143	+			28460	NFPGSVQRE	9	53	517.2566148258068	1032.4986767184134	2	517.2572631835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NFPGSVQRE_	ENSG00000198691|ENST00000370225|ABCA4	42.396135135203025	0.392153681582562	5				NaN	NaN	0	NaN	1517	2984	4496
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4517	17.805	NaN	8077.3	30	0	2626.1	0.214	+			3120	ASGSTTFTK	9	64	450.2269360059511	898.4393190787022	2	450.22686767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASGSTTFTK_	ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1670Tfs*23|1|0.29|ENSG00000174231|chr17:1659487-1659487|C/-|frameshift_variant	126.24258497203832	0.01742065577488747	5				NaN	NaN	0	NaN	1528	2987	4516
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4518	17.808	NaN	29283	30	0	3130.6	0.106	+			15430	GTYRDANIK	9	78	519.2720916869283	1036.5296304406565	2	519.2727661132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTYRDANIK_	ENSG00000112531|ENST00000361752|QKI;nc|ENSG00000112531|Q96PU8-3|QKI;nc|ENSG00000112531|Q96PU8-5|QKI;nc|ENSG00000112531|Q96PU8-6|QKI;nc|ENSG00000112531|Q96PU8-8|QKI;nc|ENSG00000112531|Q96PU8-9|QKI	94.4091291819064	0.0524345700464502	5				NaN	NaN	0	NaN	1529	2987	4516
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4519	17.81	NaN	32547	30	0	3559.6	0.106			+	28546	NIQHTPSLQ	9	74	519.2720916869283	1036.5296304406565	2	519.7742309570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NIQHTPSLQ_	REV__C2CD3|p.I477Nfs*12|2|0.31|ENSG00000168014|chr11:74118318-74118319|-/T|frameshift_variant;REV__C2CD3|p.S563Afs*9|2|0.12|ENSG00000168014|chr11:74114427-74114427|T/-|frameshift_variant;REV__ENSG00000168014|ENST00000334126|C2CD3;REV__ENST00000415191.6_1_11:73824618-73881837:-|nuORF;REV__nc|ENSG00000168014|Q4AC94-1|C2CD3;REV__nc|ENSG00000168014|Q4AC94-2|C2CD3;REV__nc|ENSG00000168014|Q4AC94-3|C2CD3;REV__nc|ENSG00000168014|Q4AC94-4|C2CD3	90.60085204095205	0.06317133949006545	5				NaN	NaN	0	NaN	1530	2987	4516
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4520	17.812	NaN	9470	30	0	1862.5	0.106	+			4060	ATDIPSSQK	9	77	473.745469480716	945.476386028232	2	473.74530029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATDIPSSQK_	APC|p.A1296Qfs*9|1|0.88|ENSG00000134982|chr5:112839478-112839478|A/-|frameshift_variant;APC|p.A1305Sfs*10|1|0.24|ENSG00000134982|chr5:112839504-112839505|-/T|frameshift_variant;APC|p.A1351Gfs*3|1|0.81|ENSG00000134982|chr5:112839644-112839645|-/G|frameshift_variant;APC|p.A1446Vfs*27|1|0.38|ENSG00000134982|chr5:112839931-112839931|C/-|frameshift_variant;APC|p.A1492Cfs*22|2|0.29|ENSG00000134982|chr5:112840063-112840064|-/T|frameshift_variant;APC|p.A1492Pfs*15|1|0.69|ENSG00000134982|chr5:112840068-112840068|G/-|frameshift_variant;APC|p.C1249Sfs*16|1|0.59|ENSG00000134982|chr5:112839340-112839340|G/-|frameshift_variant;APC|p.C1387*|1|0.31|ENSG00000134982|chr5:112839749-112839750|-/AGAT|frameshift_variant;APC|p.C1578Mfs*13|1|0.68|ENSG00000134982|chr5:112840323-112840324|-/A|frameshift_variant;APC|p.D1486Ifs*21|2|0.76|ENSG00000134982|chr5:112840049-112840049|T/-|frameshift_variant;APC|p.E1322Rfs*10|1|0.15|ENSG00000134982|chr5:112839556-112839557|-/C|frameshift_variant;APC|p.E1353Nfs*62|1|0.5|ENSG00000134982|chr5:112839649-112839649|T/-|frameshift_variant;APC|p.E1397Gfs*18|1|0.76|ENSG00000134982|chr5:112839784-112839784|A/-|frameshift_variant;APC|p.E1464Vfs*8|2|0.27|ENSG00000134982|chr5:112839979-112839982|AGAG/-|frameshift_variant;APC|p.E1494Kfs*13|1|0.84|ENSG00000134982|chr5:112840073-112840073|G/-|frameshift_variant;APC|p.E1544Nfs*21|1|0.05|ENSG00000134982|chr5:112840220-112840220|T/-|frameshift_variant;APC|p.E1552Qfs*12|1|0.31|ENSG00000134982|chr5:112840247-112840250|AGAG/-|frameshift_variant;APC|p.E1576Kfs*74|1|0.61|ENSG00000134982|chr5:112840319-112840319|A/-|frameshift_variant;APC|p.F1491Lfs*16|1|0.27|ENSG00000134982|chr5:112840064-112840064|T/-|frameshift_variant;APC|p.G1288*|1|0.58|ENSG00000134982|chr5:112839452-112839453|-/AT|frameshift_variant;APC|p.H1490Nfs*25|1|0.21|ENSG00000134982|chr5:112840059-112840060|-/TAAA|frameshift_variant;APC|p.H1490Tfs*24|1|0.23|ENSG00000134982|chr5:112840060-112840061|-/A|frameshift_variant;APC|p.H1490Yfs*18|1|0.48|ENSG00000134982|chr5:112840059-112840060|-/TA|frameshift_variant;APC|p.I1304Mfs*4|1|0.28|ENSG00000134982|chr5:112839506-112839506|A/-|frameshift_variant;APC|p.I1307Rfs*6|1|0.12|ENSG00000134982|chr5:112839511-112839515|AAATA/-|frameshift_variant;APC|p.I1311Lfs*10|1|0.45|ENSG00000134982|chr5:112839524-112839524|G/-|frameshift_variant;APC|p.I1311Rfs*3|1|0.46|ENSG00000134982|chr5:112839526-112839527|TT/-|frameshift_variant;APC|p.I1401Mfs*14|1|0.73|ENSG00000134982|chr5:112839796-112839796|T/-|frameshift_variant;APC|p.I1417Hfs*6|1|0.53|ENSG00000134982|chr5:112839839-112839840|-/G|frameshift_variant;APC|p.I1557*|1|0.43|ENSG00000134982|chr5:112840262-112840263|TA/-|frameshift_variant;APC|p.I1574Yfs*2|1|0.36|ENSG00000134982|chr5:112840312-112840312|A/-|frameshift_variant;APC|p.I1580Lfs*69|1|0.59|ENSG00000134982|chr5:112840330-112840333|TTAT/-|frameshift_variant;APC|p.I1580Nfs*11|1|0.36|ENSG00000134982|chr5:112840331-112840332|-/A|frameshift_variant;APC|p.K1454Lfs*20|1|0.81|ENSG00000134982|chr5:112839952-112839953|-/TT|frameshift_variant;APC|p.L1302Cfs*3|1|0.77|ENSG00000134982|chr5:112839496-112839496|C/-|frameshift_variant;APC|p.L1337Pfs*4|1|0.82|ENSG00000134982|chr5:112839604-112839605|TG/-|frameshift_variant;APC|p.L1488Ffs*17|1|0.27|ENSG00000134982|chr5:112840057-112840063|TATTACA/-|frameshift_variant;APC|p.L1488Yfs*19|2|0.41|ENSG00000134982|chr5:112840055-112840055|T/-|frameshift_variant;APC|p.L1489Kfs*19|1|0.34|ENSG00000134982|chr5:112840058-112840074|ATTACATTTTGCCACGG/-|frameshift_variant;APC|p.L1489Yfs*18|3|0.26|ENSG00000134982|chr5:112840059-112840059|T/-|frameshift_variant;APC|p.M1383Ifs*3|1|0.64|ENSG00000134982|chr5:112839741-112839742|-/T|frameshift_variant;APC|p.M1431Cfs*42|1|0.4|ENSG00000134982|chr5:112839883-112839883|C/-|frameshift_variant;APC|p.N1455Ifs*18|1|0.15|ENSG00000134982|chr5:112839954-112839954|A/-|frameshift_variant;APC|p.N1531Rfs*31|1|0.18|ENSG00000134982|chr5:112840186-112840195|ATGACAATGG/-|frameshift_variant;APC|p.N1535Mfs*30|1|0.28|ENSG00000134982|chr5:112840194-112840194|G/-|frameshift_variant;APC|p.P1319Lfs*2|2|0.32|ENSG00000134982|chr5:112839549-112839549|C/-|frameshift_variant;APC|p.P1319Lfs*3|1|0.27|ENSG00000134982|chr5:112839547-112839548|-/TC|frameshift_variant;APC|p.P1330Qfs*11|1|0.22|ENSG00000134982|chr5:112839583-112839584|CT/-|frameshift_variant;APC|p.P1439Lfs*34|4|0.34|ENSG00000134982|chr5:112839909-112839909|C/-|frameshift_variant;APC|p.P1442Lfs*31|1|0.41|ENSG00000134982|chr5:112839918-112839918|C/-|frameshift_variant;APC|p.P1453Lfs*20|2|0.29|ENSG00000134982|chr5:112839951-112839951|C/-|frameshift_variant;APC|p.Q1429Dfs*45|1|0.42|ENSG00000134982|chr5:112839875-112839876|-/GG|frameshift_variant;APC|p.Q1447Sfs*24|1|0.77|ENSG00000134982|chr5:112839931-112839937|CTCAAAC/-|frameshift_variant;APC|p.R1435Efs*38|1|0.41|ENSG00000134982|chr5:112839897-112839897|A/-|frameshift_variant;APC|p.R1435Lfs*31|1|0.38|ENSG00000134982|chr5:112839896-112839917|CAGAAGTAAAACACCTCCACCA/-|frameshift_variant;APC|p.S1205Tfs*60|1|0.36|ENSG00000134982|chr5:112839208-112839208|G/-|frameshift_variant;APC|p.S1272Ffs*4|1|0.15|ENSG00000134982|chr5:112839403-112839404|-/T|frameshift_variant;APC|p.S1355Ffs*62|1|0.37|ENSG00000134982|chr5:112839653-112839654|-/TTTTT|frameshift_variant;APC|p.S1355Lfs*60|2|0.6|ENSG00000134982|chr5:112839654-112839654|T/-|frameshift_variant;APC|p.S1398Ifs*17|1|0.86|ENSG00000134982|chr5:112839787-112839787|G/-|frameshift_variant;APC|p.S1400*|1|0.45|ENSG00000134982|chr5:112839793-112839793|C/-|frameshift_variant;APC|p.S1403Mfs*13|1|0.05|ENSG00000134982|chr5:112839799-112839818|CCAGCTCCGTTCAGAGTGAA/-|frameshift_variant;APC|p.S1407Vfs*8|1|0.39|ENSG00000134982|chr5:112839812-112839812|G/-|frameshift_variant;APC|p.S1411Rfs*4|1|0.42|ENSG00000134982|chr5:112839827-112839827|T/-|frameshift_variant;APC|p.S1419*|1|0.33|ENSG00000134982|chr5:112839844-112839845|-/TA|frameshift_variant;APC|p.S1421Mfs*52|1|0.67|ENSG00000134982|chr5:112839856-112839856|G/-|frameshift_variant;APC|p.S1421Vfs*52|1|0.51|ENSG00000134982|chr5:112839855-112839855|A/-|frameshift_variant;APC|p.S1436Rfs*38|1|0.42|ENSG00000134982|chr5:112839899-112839900|-/AG|frameshift_variant;APC|p.S1436Vfs*37|1|0.37|ENSG00000134982|chr5:112839899-112839899|A/-|frameshift_variant;APC|p.S1465Rfs*9|3|0.3|ENSG00000134982|chr5:112839978-112839979|-/AG|frameshift_variant;APC|p.S1501Ffs*13|1|0.5|ENSG00000134982|chr5:112840091-112840092|-/T|frameshift_variant;APC|p.S1581Lfs*69|1|0.34|ENSG00000134982|chr5:112840333-112840333|T/-|frameshift_variant;APC|p.T1313Nfs*2|1|0.51|ENSG00000134982|chr5:112839529-112839530|-/A|frameshift_variant;APC|p.T1487Yfs*18|1|0.1|ENSG00000134982|chr5:112840051-112840057|ATACTTT/-|frameshift_variant;APC|p.T1493Rfs*14|2|0.34|ENSG00000134982|chr5:112840069-112840069|C/-|frameshift_variant;APC|p.T1496Kfs*19|1|0.17|ENSG00000134982|chr5:112840075-112840076|-/AAGT|frameshift_variant;APC|p.T1556Lfs*9|1|0.61|ENSG00000134982|chr5:112840255-112840255|A/-|frameshift_variant;APC|p.T1556Nfs*3|11|0.46|ENSG00000134982|chr5:112840254-112840255|-/A|frameshift_variant;APC|p.V1390Ffs*6|1|0.39|ENSG00000134982|chr5:112839757-112839758|-/TTCT|frameshift_variant;APC|p.V1414*|4|0.37|ENSG00000134982|chr5:112839833-112839833|G/-|frameshift_variant;APC|p.V1414Efs*5|1|0.58|ENSG00000134982|chr5:112839835-112839835|T/-|frameshift_variant;ENSG00000134982|ENST00000257430|APC;nc|ENSG00000134982|P25054-2|APC;nc|ENSG00000134982|P25054-3|APC	85.86182877749512	0.07653218437724067	5				NaN	NaN	0	NaN	1531	2987	4516
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4521	17.814	NaN	21677	30	0	8878.1	0.106	+			15431	GTYRDANIK	9	50	346.5172672270217	1036.5299722812651	3	346.517333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTYRDANIK_	ENSG00000112531|ENST00000361752|QKI;nc|ENSG00000112531|Q96PU8-3|QKI;nc|ENSG00000112531|Q96PU8-5|QKI;nc|ENSG00000112531|Q96PU8-6|QKI;nc|ENSG00000112531|Q96PU8-8|QKI;nc|ENSG00000112531|Q96PU8-9|QKI	58.22992032128504	0.22837015374068087	5				NaN	NaN	0	NaN	1532	2987	4516
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4522	17.816	NaN	1803.9	30	0	616.22	0.034	+			25588	LQHALEDQ	8	50	477.23809082621835	952.4616287192367	2	477.23785400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LQHALEDQ_	ENSG00000167447|ENST00000300917|SMG8;nc|ENSG00000167447|Q8ND04-2|SMG8;nc|ENSG00000167447|Q8ND04-3|SMG8	56.72105179125745	0.5342425954139568	5				NaN	NaN	0	NaN	1533	2987	4516
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4523	17.816	NaN	11217	30	0	3453.9	0.141				-1	KEGKKGNSMA	10	69	533.2705059969516	NaN	0	533.2705078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_KEGKKGNSM(Oxidation (M))A_	nc|ENSG00000213390|Q14CB8-2|ARHGAP19	43.650786325866115	0.3457431322078509	5				NaN	NaN	0	NaN	1534	2987	4516
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4535	17.844	NaN	34686	30	0	8662.4	0.214	+			48903	VVDNGSGMCK	10	72	533.7359211805331	1065.457289427866	2	533.7367553710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_VVDNGSGMC(Carbamidomethyl (C))K_	ACTBL2|p.R29Gfs*7|1|0.37|ENSG00000169067|chr5:57482623-57482623|G/-|frameshift_variant;ENSG00000075624|ENST00000646664|ACTB;ENSG00000169067|ENST00000423391|ACTBL2;ENST00000418351.1_1_15:44282253-44282364:-|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000477812.1_1_7:5569027-5569288:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF	154.0112374973812	0.007783311651969589	5				NaN	NaN	0	NaN	1543	2990	4534
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4536	17.847	NaN	29125	30	0	3158.9	0.106	+			34369	RTQNVLGEK	9	82	522.793354095107	1043.572155257014	2	522.7938232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RTQNVLGEK_	ENSG00000149273|ENST00000531188|RPS3;ENST00000407940.1_1_6:7339375-7339741:-|nuORF;ENST00000529173.5_1_11:75110591-75112804:+|nuORF;nc|ENSG00000149273|P23396-2|RPS3	123.11161354013207	0.019316068184164998	5				NaN	NaN	0	NaN	1544	2990	4534
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4537	17.849	NaN	1957.7	30	0	364.98	0.106			+	42320	TAFSVARQ	8	50	440.2378622369354	878.4611715406709	2	440.2375793457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TAFSVARQ_	REV__ENST00000397981.7_1_19:7977316-7977859:+|nuORF	35.61828744233558	0.6843154725607303	5				NaN	NaN	0	NaN	1545	2990	4534
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4538	17.851	NaN	649.67	30	0	73.154	0.106				-1	LAFCISTSK	9	46	513.7703247070312	NaN	0	513.7703247070312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_LAFC(Carbamidomethyl (C))ISTSK_	MTURN|p.P124Ifs*46|1|0.07|ENSG00000180354|chr7:30157521-30157522|-/ATTAAAGAGTA|frameshift_variant	32.81241826257853	0.3119040447479903	5				NaN	NaN	0	NaN	1546	2990	4534
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4539	17.853	NaN	810.97	30	0	90.972	0.106	+			21461	KNGGSSRVR	9	40	480.7714557177485	959.528358502297	2	480.77142333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KNGGSSRVR_	ENSG00000140287|ENST00000267845|HDC;ENST00000559816.1_1_15:50534459-50545113:-|nuORF;nc|ENSG00000140287|P19113-2|HDC	30.317721548370564	0.5199124245378496	5				NaN	NaN	0	NaN	1547	2990	4534
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4540	17.855	NaN	2045.8	30	0	271.99	0.034	+			40304	STSSSSPLR	9	40	461.23522407066673	920.4558952081335	2	461.2347106933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STSSSSPLR_	ENST00000223023.4_1_7:123388889-123389093:-|nuORF	69.6276240434122	0.14239879520340665	5				NaN	NaN	0	NaN	1548	2990	4534
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4541	17.855	NaN	3854.8	30	0	895.79	0.138	+			43862	TMCPEESL	8	39	455.1881639363904	908.3617749395809	2	455.1876525878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TMCPEESL_	nc|ENSG00000111077|Q63HR2-2|TNS2	26.79610172149135	0.7524337208463756	5				NaN	NaN	0	NaN	1549	2990	4534
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4555	17.886	NaN	5720	30	0	1420.3	0.211				-1	KDNHVEYYTMP	11	47	706.8108445931416	1411.6071362530831	2	706.81103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_KDNHVEYYTM(Oxidation (M))P_	ENSG00000167080|ENST00000393354|B4GALNT2;nc|ENSG00000167080|Q8NHY0-3|B4GALNT2;nc|ENSG00000167080|Q8NHY0|B4GALNT2	31.529811441608018	0.6590691889962369	5				NaN	NaN	0	NaN	1560	2993	4554
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4556	17.89	NaN	5403.9	30	0	2595	0.106			+	36654	SGLSTNMK	8	44	419.21029213978807	836.4060313463762	2	419.2101135253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SGLSTNMK_	REV__ENST00000256646.6_1_1:120457631-120457709:-|nuORF	49.44154591367651	0.597725784090933	5				NaN	NaN	0	NaN	1561	2993	4554
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4557	17.892	NaN	6979.4	30	0	1364.4	0.106	+			32756	RAQDLPLKK	9	53	356.88886829553854	1067.6447754868157	3	356.8889465332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RAQDLPLKK_	ENSG00000139641|ENST00000394048|ESYT1	75.04331003522576	0.118981335847003	5				NaN	NaN	0	NaN	1562	2993	4554
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4558	17.893	NaN	1573.8	30	0	218.59	0.106			+	21323	KLTNKLNT	8	47	466.2820184593791	930.5494839855583	2	466.2816467285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KLTNKLNT_	REV__ENSG00000156384|ENST00000369727|SFR1;REV__nc|ENSG00000156384|Q86XK3-2|SFR1;REV__nc|ENSG00000156384|Q86XK3-3|SFR1	47.657333605630114	0.6087971902037268	5				NaN	NaN	0	NaN	1563	2993	4554
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4559	17.895	NaN	3955.3	30	0	2087.4	0.106				-1	LSGILSMIII	10	39	359.220688108223	NaN	0	359.2204284667969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_LSGILSM(Oxidation (M))III_	ENSG00000101337|ENST00000398022|TM9SF4;TM9SF4|p.F425Lfs*7|1|0.44|ENSG00000101337|chr20:32155128-32155128|T/-|frameshift_variant	16.71738777980365	0.4201028297492154	5				NaN	NaN	0	NaN	1564	2993	4554
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4560	17.897	NaN	3884.3	30	0	1564.6	0.039	+			39282	STARLWDHKK	10	54	414.5630361776977	NaN	0	414.5630798339844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STARLWDHKK_	ENST00000529974.1_1_11:88068229-88070878:-|nuORF	47.227680397652996	0.32312948777114064	5				NaN	NaN	0	NaN	1565	2993	4554
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4578	17.935	NaN	9190.9	30	0	955.35	0.214			+	12112	GAERPLVQ	8	77	435.24579355862323	868.4770341840465	2	435.2455749511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GAERPLVQ_	REV__ENST00000469080.5_1_X:47104878-47106896:+|nuORF	102.7733458925114	0.2491487235419157	5				NaN	NaN	0	NaN	1580	2996	4577
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4579	17.938	NaN	2889.9	30	0	620.78	0.106	+			41510	SVPPSPTS	8	42	386.1977791535062	770.3810053738124	2	386.19781494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVPPSPTS_	ENSG00000161681|ENST00000293441|SHANK1;nc|ENSG00000161681|Q9Y566-2|SHANK1;nc|ENSG00000161681|Q9Y566-3|SHANK1;SHANK1|p.L2065Sfs*68|1|0.18|ENSG00000161681|chr19:50662259-50662259|C/-|frameshift_variant	33.51558372728122	0.7005509609380386	5				NaN	NaN	0	NaN	1581	2996	4577
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4580	17.94	NaN	3488.2	30	0	728.52	0.106	+			15113	GTQSDKVTLK	10	59	538.8011924045026	1075.587831875805	2	538.8015747070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTQSDKVTLK_	ENSG00000115677|ENST00000310931|HDLBP;ENST00000479169.5_1_2:242177863-242181895:-|nuORF;ENST00000483086.1_1_2:242174984-242179130:-|nuORF;ENST00000487169.5_1_2:242174673-242189369:-|nuORF;nc|ENSG00000115677|Q00341-2|HDLBP	66.96192283764107	0.30252237217063654	5				NaN	NaN	0	NaN	1582	2996	4577
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4581	17.942	NaN	993.51	30	0	160.41	0.106			+	-1	CFHHVPLK	8	46	519.2720916869283	1036.5296304406565	2	519.2734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_C(Carbamidomethyl (C))FHHVPLK_	REV__ENSG00000166750|ENST00000299977|SLFN5;REV__ENSG00000205045|ENST00000628453|SLFN12L;REV__nc|ENSG00000166750|Q08AF3-2|SLFN5;REV__nc|ENSG00000205045|Q6IEE8-2|SLFN12L;REV__nc|ENSG00000205045|Q6IEE8|SLFN12L;REV__SLFN5|p.P698Lfs*21|1|0.46|ENSG00000166750|chr17:35265300-35265300|C/-|frameshift_variant;REV__SLFN5|p.Q524Sfs*11|1|0.73|ENSG00000166750|chr17:35264609-35264609|C/-|frameshift_variant	29.841539824830324	0.7289191502596711	5				NaN	NaN	0	NaN	1583	2996	4577
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4582	17.944	NaN	5022.1	30	0	2202.3	0.106	+			14650	GTHSAKDAKL	10	40	343.18909773633607	1026.5454638092083	3	343.1889953613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTHSAKDAKL_	ENSG00000054983|ENST00000261304|GALC;GALC|p.T518Yfs*4|1|0.3|ENSG00000054983|chr14:87945671-87945672|-/A|frameshift_variant;nc|ENSG00000054983|P54803-3|GALC;nc|ENSG00000054983|P54803-4|GALC;nc|ENSG00000054983|P54803-5|GALC	27.882242232435846	0.6521336255503853	5				NaN	NaN	0	NaN	1584	2996	4577
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4583	17.946	NaN	1918.4	30	0	179.57	0.037	+			31885	QQAGARKKEL	10	42	376.8859579612486	NaN	0	377.2044677734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QQAGARKKEL_	ENSG00000184863|ENST00000401878|RBM33;ENST00000307403.6_1_7:155532339-155538302:+|nuORF;RBM33|p.G1030Afs*52|1|0.29|ENSG00000184863|chr7:155763915-155763915|G/-|frameshift_variant;RBM33|p.L1031Pfs*109|1|0.35|ENSG00000184863|chr7:155763914-155763915|-/G|frameshift_variant;RBM33|p.P840Qfs*31|1|0.17|ENSG00000184863|chr7:155745138-155745138|C/-|frameshift_variant	27.047317107675042	0.41136583337917604	5				NaN	NaN	0	NaN	1585	2996	4577
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4584	17.946	NaN	926.18	30	0	104.13	0.141	+			12707	GEKRHCFDV	9	53	545.7611664518427	NaN	0	545.7611694335938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GEKRHCFDV_	ENSG00000161405|ENST00000346872|IKZF3;nc|ENSG00000161405|Q9UKT9-10|IKZF3;nc|ENSG00000161405|Q9UKT9-11|IKZF3;nc|ENSG00000161405|Q9UKT9-12|IKZF3;nc|ENSG00000161405|Q9UKT9-13|IKZF3;nc|ENSG00000161405|Q9UKT9-15|IKZF3;nc|ENSG00000161405|Q9UKT9-16|IKZF3;nc|ENSG00000161405|Q9UKT9-2|IKZF3;nc|ENSG00000161405|Q9UKT9-3|IKZF3;nc|ENSG00000161405|Q9UKT9-4|IKZF3;nc|ENSG00000161405|Q9UKT9-5|IKZF3;nc|ENSG00000161405|Q9UKT9-6|IKZF3;nc|ENSG00000161405|Q9UKT9-7|IKZF3;nc|ENSG00000161405|Q9UKT9-8|IKZF3;nc|ENSG00000161405|Q9UKT9-9|IKZF3	45.97224482568171	0.23445038899310136	5				NaN	NaN	0	NaN	1586	2996	4577
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4599	17.98	NaN	5069.6	30	0	764.45	0.214	+			1861	AILDKTTNK	9	66	502.2927751842878	1002.5709974353756	2	502.2928466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AILDKTTNK_	ENSG00000076067|ENST00000262031|RBMS2;ENSG00000153250|ENST00000348849|RBMS1;nc|ENSG00000153250|P29558-2|RBMS1	114.85826248499774	0.024312442104607014	5				NaN	NaN	0	NaN	1598	2999	4598
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4600	17.983	NaN	7149.3	30	0	1380.1	0.106			+	21713	KQITSHVKK	9	63	534.8299391167611	1067.6453253003222	2	534.8306274414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KQITSHVKK_	REV__ENSG00000068784|ENST00000263736|SRBD1;REV__SRBD1|p.T783Ifs*12|1|0.05|ENSG00000068784|chr2:45413279-45413280|-/CCAAA|frameshift_variant	71.87747018426188	0.13267044672804276	5				NaN	NaN	0	NaN	1599	2999	4598
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4601	17.985	NaN	8308.6	30	0	1313.2	0.106	+			15887	GYSSKGLSQ	9	56	463.73246059625455	925.4503682593091	2	463.7323913574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GYSSKGLSQ_	SLC44A4|p.I435S|1|0.34|ENSG00000204385|chr6:31866056-31866056|A/C|missense_variant	77.31757898189308	0.1091473830098891	5				NaN	NaN	0	NaN	1600	2999	4598
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4602	17.987	NaN	6744.6	30	0	2121.2	0.106	+			49194	VVMRDPQTK	9	66	537.291990685779	1072.5694284383578	2	537.2930297851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVMRDPQTK_	ENSG00000170144|ENST00000392524|HNRNPA3;ENST00000437410.2_1_1:54441353-54441674:-|nuORF;ENST00000472163.1_1_3:75263799-75264780:+|nuORF;HNRNPA3|p.K200Rfs*147|1|0.13|ENSG00000170144|chr2:177216544-177216544|A/-|frameshift_variant;HNRNPA3|p.Y267Lfs*2|1|0.62|ENSG00000170144|chr2:177216918-177216919|-/T|frameshift_variant;nc|ENSG00000170144|P51991-2|HNRNPA3	83.6470233535746	0.08277643980271215	5				NaN	NaN	0	NaN	1601	2999	4598
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4603	17.989	NaN	1578.5	30	0	106.91	0.106			+	43408	TGIYGKRG	8	44	426.24005439205376	850.4655558509075	2	426.2399597167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TGIYGKRG_	REV__EML5|p.D1019Efs*4|1|0.07|ENSG00000165521|chr14:88681957-88681958|-/AATATGT|frameshift_variant;REV__EML5|p.G1621Efs*19|1|0.2|ENSG00000165521|chr14:88624982-88624982|C/-|frameshift_variant;REV__EML5|p.N1682Mfs*7|1|0.04|ENSG00000165521|chr14:88621246-88621246|T/-|frameshift_variant;REV__ENSG00000165521|ENST00000554922|EML5;REV__nc|ENSG00000165521|Q05BV3-2|EML5;REV__nc|ENSG00000165521|Q05BV3|EML5	33.51558372728122	0.7005509609380386	5				NaN	NaN	0	NaN	1602	2999	4598
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4604	17.991	NaN	1778.9	30	0	494.87	0.035			+	35215	SAKTVEQVY	9	55	512.7692161160509	1023.5238792989018	2	515.2723999023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SAKTVEQVY_	REV__ENST00000429744.2_1_1:52645740-52646091:+|nuORF	37.15910966729921	0.4535818937225704	5				NaN	NaN	0	NaN	1603	2999	4598
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4605	17.991	NaN	1638.9	30	0	420.2	0.145	+			3894	ATAQFKINKK	10	30	383.5641390298618	NaN	0	383.5642395019531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATAQFKINKK_	ENSG00000143228|ENST00000271452|NUF2;NUF2|p.I401Nfs*2|1|0.3|ENSG00000143228|chr1:163349015-163349016|-/A|frameshift_variant	19.262678746197807	0.4201028297492154	5				NaN	NaN	0	NaN	1604	2999	4598
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4622	18.028	NaN	161460	30	0	63004	0.168	+			4074	ATDKSFVEK	9	107	512.7692161160509	1023.5238792989018	2	512.7694091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATDKSFVEK_	ENSG00000100345|ENST00000216181|MYH9;ENSG00000105357|ENST00000642316|MYH14;ENSG00000133392|ENST00000300036|MYH11;MYH14|p.L1950Sfs*14|1|0.34|ENSG00000105357|chr19:50309646-50309646|C/-|frameshift_variant;MYH14|p.M997*|1|0.19|ENSG00000105357|chr19:50271483-50271483|A/-|frameshift_variant;MYH14|p.R929Gfs*44|1|0.38|ENSG00000105357|chr19:50268237-50268237|G/-|frameshift_variant;MYH9|p.I784*|1|0.07|ENSG00000100345|chr22:36304036-36304036|G/-|frameshift_variant;nc|ENSG00000100345|P35579-2|MYH9;nc|ENSG00000105357|Q7Z406-4|MYH14;nc|ENSG00000105357|Q7Z406-5|MYH14;nc|ENSG00000105357|Q7Z406-6|MYH14;nc|ENSG00000105357|Q7Z406|MYH14;nc|ENSG00000133392|P35749-2|MYH11;nc|ENSG00000133392|P35749-3|MYH11;nc|ENSG00000133392|P35749-4|MYH11	182.3913890336628	0.0010559746847940753	5				NaN	NaN	0	NaN	1618	3002	4621
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4623	18.031	NaN	90056	30	0	24630	0.106	+			4075	ATDKSFVEK	9	102	342.1818399711581	1023.5236905136744	3	342.1817626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATDKSFVEK_	ENSG00000100345|ENST00000216181|MYH9;ENSG00000105357|ENST00000642316|MYH14;ENSG00000133392|ENST00000300036|MYH11;MYH14|p.L1950Sfs*14|1|0.34|ENSG00000105357|chr19:50309646-50309646|C/-|frameshift_variant;MYH14|p.M997*|1|0.19|ENSG00000105357|chr19:50271483-50271483|A/-|frameshift_variant;MYH14|p.R929Gfs*44|1|0.38|ENSG00000105357|chr19:50268237-50268237|G/-|frameshift_variant;MYH9|p.I784*|1|0.07|ENSG00000100345|chr22:36304036-36304036|G/-|frameshift_variant;nc|ENSG00000100345|P35579-2|MYH9;nc|ENSG00000105357|Q7Z406-4|MYH14;nc|ENSG00000105357|Q7Z406-5|MYH14;nc|ENSG00000105357|Q7Z406-6|MYH14;nc|ENSG00000105357|Q7Z406|MYH14;nc|ENSG00000133392|P35749-2|MYH11;nc|ENSG00000133392|P35749-3|MYH11;nc|ENSG00000133392|P35749-4|MYH11	63.53385203322761	0.18415635464017938	5				NaN	NaN	0	NaN	1619	3002	4621
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4624	18.033	NaN	6822.2	30	0	881.77	0.106	+			42740	TDKSFVEK	8	67	477.2506802770991	952.4868076209982	2	477.2504577636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TDKSFVEK_	ENSG00000100345|ENST00000216181|MYH9;ENSG00000105357|ENST00000642316|MYH14;ENSG00000133392|ENST00000300036|MYH11;MYH14|p.L1950Sfs*14|1|0.34|ENSG00000105357|chr19:50309646-50309646|C/-|frameshift_variant;MYH14|p.M997*|1|0.19|ENSG00000105357|chr19:50271483-50271483|A/-|frameshift_variant;MYH14|p.R929Gfs*44|1|0.38|ENSG00000105357|chr19:50268237-50268237|G/-|frameshift_variant;MYH9|p.I784*|1|0.07|ENSG00000100345|chr22:36304036-36304036|G/-|frameshift_variant;nc|ENSG00000100345|P35579-2|MYH9;nc|ENSG00000105357|Q7Z406-4|MYH14;nc|ENSG00000105357|Q7Z406-5|MYH14;nc|ENSG00000105357|Q7Z406-6|MYH14;nc|ENSG00000105357|Q7Z406|MYH14;nc|ENSG00000133392|P35749-2|MYH11;nc|ENSG00000133392|P35749-3|MYH11;nc|ENSG00000133392|P35749-4|MYH11	138.06239232086	0.25094148691442464	5				NaN	NaN	0	NaN	1620	3002	4621
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4625	18.035	NaN	2121.6	30	0	439.54	0.106	+			35126	SAHNGGSAF	9	50	424.18812701687193	846.3617011005439	2	424.1881103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SAHNGGSAF_	ENSG00000184363|ENST00000331563|PKP3;nc|ENSG00000184363|Q9Y446-2|PKP3;PKP3|p.L464Pfs*224|1|0.46|ENSG00000184363|chr11:400076-400077|-/C|frameshift_variant;PKP3|p.L464Sfs*183|3|0.22|ENSG00000184363|chr11:400077-400077|C/-|frameshift_variant	58.78195531508484	0.22376836668196862	5				NaN	NaN	0	NaN	1621	3002	4621
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4626	18.037	NaN	1925.9	30	0	237.44	0.106	+			47632	VSAPRVGGK	9	56	435.761676888374	869.508800843548	2	435.7613525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSAPRVGGK_	ENSG00000114391|ENST00000394077|RPL24;ENST00000454858.1_1_3:195281775-195281898:+|nuORF;RPL24|p.R157H|1|0.32|ENSG00000114391|chr3:101681139-101681139|C/T|missense_variant	47.657333605630114	0.33044192980041115	5				NaN	NaN	0	NaN	1622	3002	4621
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4627	18.038	NaN	1174.4	30	0	147.76	0.106	+			8973	EFLLVLVNL	9	38	530.3245239257812	NaN	0	530.3245239257812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EFLLVLVNL_	ENSG00000103197|ENST00000219476|TSC2;nc|ENSG00000103197|P49815-2|TSC2;nc|ENSG00000103197|P49815-3|TSC2;nc|ENSG00000103197|P49815-4|TSC2;nc|ENSG00000103197|P49815-5|TSC2;nc|ENSG00000103197|P49815-6|TSC2;nc|ENSG00000103197|P49815-7|TSC2;TSC2|p.S1427Vfs*49|1|0.21|ENSG00000103197|chr16:2084499-2084499|A/-|frameshift_variant	34.172542307311794	0.30503706118289736	5				NaN	NaN	0	NaN	1623	3002	4621
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4628	18.04	NaN	3468.9	30	0	681.23	0.033			+	44511	TSSVSFPK	8	55	426.72638332081254	851.4382137084251	2	426.726318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TSSVSFPK_	REV__ENSG00000144747|ENST00000398559|TMF1;REV__nc|ENSG00000144747|P82094-2|TMF1	71.29570347882199	0.39610197767395533	5				NaN	NaN	0	NaN	1624	3002	4621
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4646	18.078	NaN	7696.4	30	0	2271.9	0.214	+			35605	SCCPVGCAK	9	58	491.2003902081976	980.3862274831952	2	491.2009582519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_SCC(Carbamidomethyl (C))PVGC(Carbamidomethyl (C))AK_	CON__P67983;ENSG00000125144|ENST00000379811|MT1G;ENSG00000125148|ENST00000245185|MT2A;ENSG00000169688|ENST00000334346|MT1B;ENSG00000187193|ENST00000394485|MT1X;ENSG00000205364|ENST00000379818|MT1M;ENST00000330439.6_1_16:56660742-56660880:+|nuORF;ENST00000562017.1_1_16:56643131-56643263:+|nuORF;ENST00000563985.1_1_16:56642884-56643263:+|nuORF;ENST00000567300.1_1_16:56642646-56643263:+|nuORF;nc|ENSG00000125144|P13640-2|MT1G;nc|ENSG00000169715|P04732|MT1E	108.08749611321984	0.03094949498378333	5				NaN	NaN	0	NaN	1639	3005	4645
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4647	18.081	NaN	3835.8	30	0	2113.4	0.106	+			30471	QAEEKAHAF	9	59	515.7507871979595	1029.487021462719	2	515.7510986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QAEEKAHAF_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	67.49366992349736	0.1516260258713357	5				NaN	NaN	0	NaN	1640	3005	4645
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4648	18.083	NaN	3034.2	30	0	844.6	0.106	+			35789	SEAGSHTL	8	47	401.19043002315965	NaN	0	401.1903991699219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEAGSHTL_	ENSG00000204592|ENST00000376630|HLA-E;ENSG00000204642|ENST00000259951|HLA-F;ENSG00000234745|ENST00000412585|HLA-B;ENST00000474381.1_1_6:31323854-31324663:-|nuORF;HLA-B|p.G124Wfs*15|1|0.18|ENSG00000234745|chr6:31356416-31356417|-/A|frameshift_variant;HLA-B|p.H215Tfs*11|1|0.35|ENSG00000234745|chr6:31355569-31355569|G/-|frameshift_variant;HLA-B|p.P209Qfs*5|6|0.16|ENSG00000234745|chr6:31355586-31355586|G/-|frameshift_variant;HLA-B|p.V306Afs*13|1|0.49|ENSG00000234745|chr6:31355202-31355202|A/-|frameshift_variant;HLA-B|p.V312Cfs*22|1|0.28|ENSG00000234745|chr6:31355185-31355186|-/A|frameshift_variant;nc|ENSG00000204642|P30511-2|HLA-F;nc|ENSG00000204642|P30511|HLA-F	73.97473282117947	1.7418937515398478	5				NaN	NaN	0	NaN	1641	3005	4645
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4649	18.085	NaN	1455.6	30	0	140.97	0.106			+	30118	PRPSFPLAT	9	42	493.27480737794104	984.5350618226821	2	493.2749328613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PRPSFPLAT_	REV__ENST00000539777.5_1_1:168105623-168105902:-|nuORF	20.94693142431847	0.6074874384046576	5				NaN	NaN	0	NaN	1642	3005	4645
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4650	18.087	NaN	349.06	30	0	41.853	0.106			+	10984	FEELRIWQ	8	26	560.7927716245318	NaN	0	560.7931518554688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FEELRIWQ_	REV__ENST00000584641.5_1_17:65197178-65214920:-|nuORF	20.94693142431847	1.7418937515398478	5				NaN	NaN	0	NaN	1643	3005	4645
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4651	18.089	NaN	1027.2	30	0	64.591	0.035	+			31093	QFLPLKNGK	9	64	522.812744140625	NaN	0	522.812744140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QFLPLKNGK_	nc|ENSG00000163357|Q5T197-2|DCST1	51.33545320467046	0.19748963086191895	5				NaN	NaN	0	NaN	1644	3005	4645
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4652	18.089	NaN	625.39	30	0	73.158	0.141			+	-1	YCFMLRRV	8	41	552.2762451171875	NaN	0	552.2762451171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_YCFM(Oxidation (M))LRRV_	REV__ENSG00000101188|ENST00000370501|NTSR1	21.70233525837049	1.7418937515398478	5				NaN	NaN	0	NaN	1645	3005	4645
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4670	18.129	NaN	11541	30	0	2718.7	0.214			+	20260	KENAARLKDV	10	60	572.3277935621695	1142.641034191139	2	572.3284912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KENAARLKDV_	REV__ENSG00000106665|ENST00000223398|CLIP2;REV__ENST00000487091.1_1_7:73790414-73795297:+|nuORF;REV__nc|ENSG00000106665|Q9UDT6-2|CLIP2	56.632244143249146	0.3964695498866976	5				NaN	NaN	0	NaN	1660	3008	4669
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4671	18.132	NaN	14089	30	0	4888.3	0.106	+			49305	VVQRVEIHK	9	50	369.8927067037185	1106.6562907113555	3	369.89263916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVQRVEIHK_	ENSG00000213977|ENST00000225525|TAX1BP3	56.72105179125745	0.24094814563026265	5				NaN	NaN	0	NaN	1661	3008	4669
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4672	18.134	NaN	7685.8	30	0	2436.3	0.106	+			35115	SAGPPSLRK	9	51	456.7663556179852	911.5181583027704	2	456.7666320800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAGPPSLRK_	ENSG00000146463|ENST00000314607|ZMYM4;nc|ENSG00000146463|Q5VZL5-2|ZMYM4;nc|ENSG00000146463|Q5VZL5-3|ZMYM4;nc|ENSG00000146463|Q5VZL5-4|ZMYM4;ZMYM4|p.A956Sfs*68|1|0.38|ENSG00000146463|chr1:35393690-35393691|-/A|frameshift_variant;ZMYM4|p.D1229Ifs*2|1|0.12|ENSG00000146463|chr1:35405175-35405175|G/-|frameshift_variant;ZMYM4|p.N1222Kfs*15|1|0.25|ENSG00000146463|chr1:35405154-35405155|-/A|frameshift_variant	65.46538089061403	0.16805504838372562	5				NaN	NaN	0	NaN	1662	3008	4669
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4673	18.136	NaN	9718.7	30	0	5229.1	0.106			+	21113	KKRGFVQVS	9	49	350.2135443067766	1047.6188035205298	3	350.2135314941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KKRGFVQVS_	REV__ENSG00000105193|ENST00000251453|RPS16;REV__ENST00000469078.5_1_19:20235852-20236290:+|nuORF;REV__ENST00000601390.1_1_19:39926180-39926535:-|nuORF	36.446750945000026	0.4619375763483977	5				NaN	NaN	0	NaN	1663	3008	4669
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4674	18.138	NaN	3034.7	30	0	392.18	0.106			+	16708	HLARFKKR	8	60	528.3320935371003	1054.6496341410004	2	528.3329467773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HLARFKKR_	REV__ENSG00000182916|ENST00000332431|TCEAL7	30.503639358989545	0.7238069182250283	5				NaN	NaN	0	NaN	1664	3008	4669
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4675	18.14	NaN	4226.6	30	0	547.27	0.034	+			15133	GTSDGRILK	9	56	473.7691393530991	945.5237257729982	2	473.7694091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTSDGRILK_	ENSG00000196576|ENST00000359337|PLXNB2;PLXNB2|p.G872Vfs*42|1|0.08|ENSG00000196576|chr22:50283401-50283401|C/-|frameshift_variant;PLXNB2|p.L1362Rfs*32|1|0.1|ENSG00000196576|chr22:50280578-50280579|CA/-|frameshift_variant;PLXNB2|p.V873Cfs*66|1|0.2|ENSG00000196576|chr22:50283400-50283401|-/C|frameshift_variant;PLXNB2|p.V928Cfs*3|1|0.71|ENSG00000196576|chr22:50283084-50283084|C/-|frameshift_variant	60.11826168202944	0.21262886028301267	5				NaN	NaN	0	NaN	1665	3008	4669
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4676	18.14	NaN	4659.9	30	0	1033.2	0.14	+			4770	ATNDSVVADK	10	64	510.2537885846336	1018.4930242360672	2	510.2546081542969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATNDSVVADK_	ENSG00000205220|ENST00000358514|PSMB10;ENST00000575556.1_1_16:67970119-67970555:-|nuORF	166.10729829436417	0.004923141487602414	5				NaN	NaN	0	NaN	1666	3008	4669
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4692	18.175	NaN	4785.1	30	0	447.97	0.214	+			19697	KDRRLTLE	8	75	515.803883025582	1029.5932131179638	2	515.8043212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KDRRLTLE_	ENSG00000138336|ENST00000373644|TET1;nc|ENSG00000138336|Q8NFU7-2|TET1;TET1|p.N1409Tfs*2|1|0.24|ENSG00000138336|chr10:68646950-68646950|A/-|frameshift_variant	58.78195531508484	0.5138399468736706	5				NaN	NaN	0	NaN	1679	3011	4691
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4693	18.179	NaN	1702.9	30	0	296.6	0.106			+	23056	KVTEKVEK	8	55	480.78971931646123	959.5648856997225	2	480.78936767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVTEKVEK_	REV__tr|U7SGM4|U7SGM4_FUSNUAutotransporterdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02244PE=4SV=1	34.172542307311794	0.6954784234644539	5				NaN	NaN	0	NaN	1680	3011	4691
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4694	18.181	NaN	1385.2	30	0	390.87	0.106	+			37112	SISSPQPGK	9	46	450.7427944319077	899.4710359306155	2	450.7424011230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SISSPQPGK_	ENSG00000136279|ENST00000448521|DBNL;nc|ENSG00000136279|Q9UJU6-2|DBNL;nc|ENSG00000136279|Q9UJU6-3|DBNL;nc|ENSG00000136279|Q9UJU6-4|DBNL;nc|ENSG00000136279|Q9UJU6-5|DBNL;nc|ENSG00000136279|Q9UJU6-6|DBNL	52.936696900407355	0.27249468807391813	5				NaN	NaN	0	NaN	1681	3011	4691
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4695	18.183	NaN	2160.2	30	0	270.54	0.106			+	42698	TDAGHSQL	8	53	414.6957679333807	827.3769829335614	2	414.69573974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TDAGHSQL_	REV__ENSG00000165887|ENST00000370655|ANKRD2;REV__nc|ENSG00000165887|Q9GZV1-2|ANKRD2;REV__nc|ENSG00000165887|Q9GZV1|ANKRD2	58.78195531508484	0.5138399468736706	5				NaN	NaN	0	NaN	1682	3011	4691
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4696	18.184	NaN	674.2	30	0	139.47	0.038			+	37220	SKLTDNKLEF	10	35	597.822592419841	NaN	0	597.8225708007812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SKLTDNKLEF_	REV__ENST00000551312.6_2_15:25227174-25227288:+|nuORF	24.519189625965996	0.41966695327750003	5				NaN	NaN	0	NaN	1683	3011	4691
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4713	18.22	NaN	2755	30	0	644.08	0.214	+			32123	QSLAALLNK	9	56	479.28966380265837	956.5647746721168	2	479.28973388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QSLAALLNK_	ENSG00000095002|ENST00000233146|MSH2;MSH2|p.K334T|1|0.21|ENSG00000095002|chr2:47416354-47416354|A/C|missense_variant;MSH2|p.M813Nfs*11|1|0.17|ENSG00000095002|chr2:47478497-47478498|-/A|frameshift_variant;MSH2|p.R382Ifs*26|1|0.23|ENSG00000095002|chr2:47429809-47429821|CGTCGATTCCCAG/-|frameshift_variant;MSH2|p.T806Kfs*4|1|0.2|ENSG00000095002|chr2:47478472-47478478|CACTCAC/-|frameshift_variant;nc|ENSG00000095002|P43246-2|MSH2	79.71258880314673	0.09879134589249085	5				NaN	NaN	0	NaN	1697	3014	4712
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4714	18.223	NaN	2273.5	30	0	461.84	0.106			+	14611	GTGETAPLMK	10	52	502.759399864517	1003.504246795834	2	502.759521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTGETAPLMK_	REV__ENST00000487159.5_2_3:42128838-42166989:+|nuORF	32.81241826257853	0.6118718159329168	5				NaN	NaN	0	NaN	1698	3014	4712
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4715	18.225	NaN	17622	30	0	3684.2	0.106			+	45343	TVSLGTPVTLK	11	73	372.56098476651664	1114.66112489975	3	372.56085205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVSLGTPVTLK_	REV__ENSG00000114923|ENST00000358055|SLC4A3;REV__ENST00000425141.5_1_2:220498093-220506447:+|nuORF;REV__nc|ENSG00000114923|P48751-2|SLC4A3;REV__nc|ENSG00000114923|P48751-3|SLC4A3	39.873155843976775	0.5596786644756743	5				NaN	NaN	0	NaN	1699	3014	4712
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4716	18.227	NaN	1242.2	30	0	132.72	0.106	+			24431	LGAVITNEQ	9	46	472.7557071186743	NaN	0	472.7554626464844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LGAVITNEQ_	tr|U7T4Y6|U7T4Y6_FUSNUL-threonylcarbamoyladenylatesynthaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00240PE=3SV=1	38.80614096846853	0.28164298475537564	5				NaN	NaN	0	NaN	1700	3014	4712
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4717	18.229	NaN	2216.5	30	0	293.45	0.106	+			2588	AQFRQPLKK	9	68	558.3375651567403	1114.6605773802805	2	558.3382568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AQFRQPLKK_	DENND4C|p.F1650Yfs*12|1|0.38|ENSG00000137145|chr9:19358095-19358096|TT/-|frameshift_variant;DENND4C|p.R1677Dfs*12|1|0.24|ENSG00000137145|chr9:19360255-19360255|A/-|frameshift_variant;ENSG00000137145|ENST00000434457|DENND4C;ENST00000380437.8_1_9:19332177-19336426:+|nuORF;ENST00000494124.2_1_9:19316810-19337609:+|nuORF;nc|ENSG00000137145|Q5VZ89-3|DENND4C;nc|ENSG00000137145|Q5VZ89-5|DENND4C;nc|ENSG00000137145|Q5VZ89|DENND4C	60.97194046774394	0.20551255781574032	5				NaN	NaN	0	NaN	1701	3014	4712
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4718	18.231	NaN	1219.6	30	0	374.74	0.036	+			31464	QKVKRVIGV	9	30	342.89764404296875	NaN	0	342.89764404296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QKVKRVIGV_	ENST00000487668.5_1_22:20100432-20101310:-|nuORF	9.705651100619752	0.40413237678333463	5				NaN	NaN	0	NaN	1702	3014	4712
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4729	18.256	NaN	15392	30	0	2440.6	0.214			+	1991	AKESLVDIIK	10	70	372.56098476651664	1114.66112489975	3	372.5608215332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AKESLVDIIK_	REV__tr|U7SFS9|U7SFS9_FUSNUAdenylosuccinatesynthetaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=purAPE=3SV=1	28.081489160057373	0.6505064946289502	5				NaN	NaN	0	NaN	1710	3017	4728
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4730	18.26	NaN	468.42	30	0	72.216	0.106			+	30349	PTVSKPFVVL	10	34	543.8308305976044	NaN	0	543.8302001953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PTVSKPFVVL_	REV__AKR1B1|p.I261F|1|0.09|ENSG00000085662|chr7:134447342-134447342|T/A|missense_variant	29.550750289552195	0.40314579734438066	5				NaN	NaN	0	NaN	1711	3017	4728
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4731	18.261	NaN	1606.9	30	0	235.35	0.035				-1	GELCSLWI	8	53	489.23950927488903	NaN	0	489.2388000488281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_GELC(Carbamidomethyl (C))SLWI_	ENST00000430223.6_2_8:99248441-99264797:-|nuORF	42.47446043378293	1.7418937515398478	5				NaN	NaN	0	NaN	1712	3017	4728
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4742	18.287	NaN	7322.4	30	0	1975.7	0.214	+			4229	ATGDLATSR	9	59	446.23041192932504	890.4462709254501	2	446.23040771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATGDLATSR_	ENSG00000167642|ENST00000301244|SPINT2;ENST00000590210.1_1_19:38755508-38778604:+|nuORF;nc|ENSG00000167642|O43291-2|SPINT2	168.25843898104137	0.0030641937004078144	5				NaN	NaN	0	NaN	1720	3020	4741
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4743	18.29	NaN	2719.4	30	0	742.37	0.106	+			5912	AVLDKVKTK	9	62	501.32188982519403	1000.6292267171881	2	501.3216247558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVLDKVKTK_	ENSG00000051382|ENST00000674063|PIK3CB;PIK3CB|p.T930Lfs*62|1|0.47|ENSG00000051382|chr3:138663914-138663914|T/-|frameshift_variant	88.17693792209575	0.07000514020414955	5				NaN	NaN	0	NaN	1721	3020	4741
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4744	18.292	NaN	2398.1	30	0	308.66	0.106	+			12490	GEEEGRATV	9	48	474.2253316617283	946.4361103902567	2	474.22540283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEEEGRATV_	ENSG00000115866|ENST00000264161|DARS1;nc|ENSG00000115866|P14868-2|DARS1	59.93077597824379	0.21419174904018318	5				NaN	NaN	0	NaN	1722	3020	4741
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4745	18.294	NaN	3187.9	30	0	618.56	0.037	+			17743	IEQEKRSEI	9	60	566.3047287301597	1130.5949045271193	2	566.3048706054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IEQEKRSEI_	ENSG00000034510|ENST00000233143|TMSB10	70.39856735676683	0.13906523160059378	5				NaN	NaN	0	NaN	1723	3020	4741
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4759	18.323	NaN	26799	30	0	4716.3	0.214	+			34932	SAAGHVLVK	9	84	441.26383239132394	880.5131118494479	2	441.26409912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAAGHVLVK_	ENSG00000183508|ENST00000369448|TENT5C	157.32903759742106	0.0051608477690748295	5				NaN	NaN	0	NaN	1734	3023	4758
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4760	18.327	NaN	5186.1	30	0	753.53	0.106	+			1271	AESGRGQVM	9	59	467.7241771880287	933.4338014428574	2	467.7243347167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AESGRGQVM_	ENSG00000008517|ENST00000525643|IL32;nc|ENSG00000008517|P24001-3|IL32;nc|ENSG00000008517|P24001-4|IL32;nc|ENSG00000008517|P24001|IL32	79.71258880314673	0.09879134589249085	5				NaN	NaN	0	NaN	1735	3023	4758
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4761	18.329	NaN	2848.5	30	0	416.77	0.106	+			41069	SVIKNVSTK	9	60	488.2957236940604	974.5768944549209	2	488.2957458496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVIKNVSTK_	ENSG00000122257|ENST00000319715|RBBP6;nc|ENSG00000122257|Q7Z6E9-2|RBBP6;nc|ENSG00000122257|Q7Z6E9-4|RBBP6;RBBP6|p.D1432Vfs*9|1|0.04|ENSG00000122257|chr16:24571360-24571361|-/TTTTCCCTTTTTC|frameshift_variant;RBBP6|p.T1475Lfs*20|1|0.3|ENSG00000122257|chr16:24571483-24571483|A/-|frameshift_variant	82.7504851949679	0.08565546331141553	5				NaN	NaN	0	NaN	1736	3023	4758
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4762	18.33	NaN	1667	30	0	136.8	0.036	+			47023	VLARKLAEK	9	36	343.2252600368718	NaN	0	343.2254943847656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VLARKLAEK_	ENSG00000151612|ENST00000508784|ZNF827;nc|ENSG00000151612|Q17R98-2|ZNF827	53.351449002276354	0.18359631779194618	5				NaN	NaN	0	NaN	1737	3023	4758
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4774	18.356	NaN	4900.4	30	0	1025	0.214	+			45908	VAQGGGRAL	9	53	414.7379170389415	827.461281144683	2	414.7377624511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VAQGGGRAL_	ENSG00000140553|ENST00000418476|UNC45A;ENST00000487875.5_1_15:91491769-91496943:+|nuORF;nc|ENSG00000140553|Q9H3U1-2|UNC45A	94.00642277110589	0.05356993013874309	5				NaN	NaN	0	NaN	1746	3026	4773
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4775	18.36	NaN	3420.8	30	0	724.61	0.106	+			29741	PHPVSTGG	8	38	376.19045381102956	750.3663546888591	2	376.19012451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PHPVSTGG_	ENST00000443619.6_1_2:65541275-65559155:-|nuORF	37.028477286268924	0.6747514403204248	5				NaN	NaN	0	NaN	1747	3026	4773
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4776	18.362	NaN	3722.7	30	0	399.17	0.106	+			27136	MASRTSSEM	9	52	500.2150129388657	998.4154729445314	2	500.2149353027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MASRTSSEM_	ENSG00000265972|ENST00000582401|TXNIP;ENST00000488537.1_1_1:145440673-145441098:+|nuORF;nc|ENSG00000265972|Q9H3M7-2|TXNIP	126.24258497203832	0.01742065577488747	5				NaN	NaN	0	NaN	1748	3026	4773
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4777	18.363	NaN	3857.3	30	0	2981.7	0.106	+			31383	QKGSSDLL	8	40	424.22967249967576	846.4447920661515	2	424.22943115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QKGSSDLL_	FBXO30|p.N264K|1|0.16|ENSG00000118496|chr6:145805614-145805614|A/C|missense_variant	21.9598887501803	0.7897753010812679	5				NaN	NaN	0	NaN	1749	3026	4773
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4778	18.365	NaN	1891.9	30	0	488.31	0.106	+			31460	QKTPRDVVM	9	47	537.291990685779	1072.5694284383578	2	537.29248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QKTPRDVVM_	ENSG00000090989|ENST00000381295|EXOC1;ENST00000511971.5_1_4:56749994-56766742:+|nuORF;EXOC1|p.E754Kfs*18|1|0.25|ENSG00000090989|chr4:55899799-55899799|A/-|frameshift_variant;EXOC1|p.G824Vfs*2|5|0.15|ENSG00000090989|chr4:55902469-55902469|A/-|frameshift_variant;EXOC1|p.K777Nfs*2|1|0.37|ENSG00000090989|chr4:55899874-55899874|A/-|frameshift_variant;nc|ENSG00000090989|Q9NV70-2|EXOC1	25.125986553469783	0.568431947241088	5				NaN	NaN	0	NaN	1750	3026	4773
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4779	18.367	NaN	2248.8	30	0	499.5	0.035	+			37117	SISVTKITK	9	56	488.8055021012703	NaN	0	488.7605895996094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SISVTKITK_	ENSG00000143575|ENST00000328703|HAX1;ENST00000459914.1_1_1:154247547-154248174:+|nuORF;ENST00000477780.2_1_1:154247547-154247742:+|nuORF;ENST00000492550.1_1_1:154246365-154247742:+|nuORF;nc|ENSG00000143575|O00165-2|HAX1;nc|ENSG00000143575|O00165-3|HAX1;nc|ENSG00000143575|O00165-5|HAX1	36.446750945000026	0.29355505452396785	5				NaN	NaN	0	NaN	1751	3026	4773
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4780	18.368	NaN	748.02	30	0	90.932	0.138	+			23727	LAVHLPQGA	9	44	453.2635803222656	NaN	0	453.2635803222656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LAVHLPQGA_	ENSG00000005961|ENST00000262407|ITGA2B;ENST00000592462.5_1_17:42452826-42458421:-|nuORF;nc|ENSG00000005961|P08514-2|ITGA2B;nc|ENSG00000005961|P08514-3|ITGA2B	35.200714571348534	0.2998460331538257	5				NaN	NaN	0	NaN	1752	3026	4773
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4792	18.395	NaN	4562.2	30	0	799.84	0.214	+			40941	SVFSQSGNSR	10	64	534.757203341555	1067.49985374991	2	534.7577514648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVFSQSGNSR_	CDC27|p.I404Sfs*15|1|0.44|ENSG00000004897|chr17:47142397-47142397|T/-|frameshift_variant;CDC27|p.P360Lfs*7|1|0.33|ENSG00000004897|chr17:47143976-47143977|-/AATTTAAA|frameshift_variant;ENSG00000004897|ENST00000066544|CDC27;ENST00000525495.6_2_17:45219385-45266538:-|nuORF;ENST00000533415.5_1_17:45198303-45266605:-|nuORF;nc|ENSG00000004897|P30260-2|CDC27	58.2462437865262	0.38179041844353556	5				NaN	NaN	0	NaN	1761	3029	4791
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4793	18.398	NaN	578.21	30	0	45.786	0.106	+			26650	LVEGQVPHSL	10	30	360.20053392594	NaN	0	360.2003173828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LVEGQVPHSL_	FBXO7|p.S174L|1|0.11|ENSG00000100225|chr22:32484000-32484000|C/T|missense_variant	23.04248740728303	0.42010282974921537	5				NaN	NaN	0	NaN	1762	3029	4791
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4794	18.4	NaN	1952.4	30	0	495.5	0.035	+			45934	VAREHRQK	8	60	512.2954979523078	NaN	0	512.2952270507812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VAREHRQK_	ENST00000405727.6_1_4:153784845-153793645:+|nuORF	49.44154591367651	1.7418937515398478	5				NaN	NaN	0	NaN	1763	3029	4791
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4804	18.422	NaN	32647	30	0	3645.5	0.214	+			48596	VTQSEIAQK	9	75	502.27452428991364	1002.5344956466273	2	502.2745666503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTQSEIAQK_	ENSG00000197702|ENST00000334956|PARVA;ENST00000533345.5_1_11:12419899-12534890:+|nuORF	210.63843547868274	4.9830215718698895E-08	5				NaN	NaN	0	NaN	1770	3032	4803
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4805	18.426	NaN	10160	30	0	3584.3	0.106	+			5125	ATSSTLVSK	9	62	447.25073291451196	892.4869128958239	2	447.2506103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATSSTLVSK_	ENST00000332782.6_1_12:57640633-57642538:-|nuORF	101.25262130126117	0.03792372629710479	5				NaN	NaN	0	NaN	1771	3032	4803
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4806	18.428	NaN	4775.5	30	0	1158	0.106				-1	MTVMEAVD	8	52	464.19359332511925	926.3726337170385	2	464.19366455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Oxidation (M)	_M(Oxidation (M))TVM(Oxidation (M))EAVD_	ENSG00000100253|ENST00000216075|MIOX;nc|ENSG00000100253|Q9UGB7-2|MIOX	45.9519527083369	0.6193794311207887	5				NaN	NaN	0	NaN	1772	3032	4803
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4807	18.43	NaN	3344.8	30	0	1305.6	0.106	+			24622	LGSGKVIKG	9	52	429.7742354331492	857.5339179330985	2	429.7740478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LGSGKVIKG_	ENSG00000119321|ENST00000238256|FKBP15;FKBP15|p.K665Rfs*9|2|0.21|ENSG00000119321|chr9:113178722-113178722|T/-|frameshift_variant;nc|ENSG00000119321|Q5T1M5-2|FKBP15;nc|ENSG00000119321|Q5T1M5-3|FKBP15	54.776311868738084	0.25715957988447635	5				NaN	NaN	0	NaN	1773	3032	4803
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4808	18.431	NaN	959.6	30	0	115.48	0.106			+	-1	PMLELRNKA	9	46	544.3014526367188	NaN	0	544.3014526367188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_PM(Oxidation (M))LELRNKA_	REV__ENSG00000065526|ENST00000375759|SPEN;REV__SPEN|p.A2105Lfs*33|1|0.46|ENSG00000065526|chr1:15932548-15932548|G/-|frameshift_variant;REV__SPEN|p.A2251Qfs*102|3|0.29|ENSG00000065526|chr1:15932985-15932985|C/-|frameshift_variant;REV__SPEN|p.G1860Efs*9|1|0.33|ENSG00000065526|chr1:15931816-15931816|G/-|frameshift_variant;REV__SPEN|p.I1052Sfs*40|1|0.35|ENSG00000065526|chr1:15929388-15929388|A/-|frameshift_variant;REV__SPEN|p.I1159Lfs*28|1|0.25|ENSG00000065526|chr1:15929710-15929710|A/-|frameshift_variant;REV__SPEN|p.N2053Tfs*11|1|0.43|ENSG00000065526|chr1:15932394-15932394|A/-|frameshift_variant;REV__SPEN|p.P2055Lfs*9|1|0.32|ENSG00000065526|chr1:15932399-15932399|C/-|frameshift_variant	37.15910966729921	0.2899585034171616	5				NaN	NaN	0	NaN	1774	3032	4803
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4809	18.433	NaN	968.88	30	0	98.056	0.035	+			13757	GQEEQARLV	9	43	515.2705078125	NaN	0	515.2705078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GQEEQARLV_	ATAD3C|p.R306Q|1|0.12|ENSG00000215915|chr1:1460854-1460854|G/A|missense_variant	31.529811441608018	0.3183796599642538	5				NaN	NaN	0	NaN	1775	3032	4803
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4822	18.46	NaN	17551	30	0	1972.1	0.214	+			34388	RTSEIYVHR	9	73	387.5440359749453	1159.610278525036	3	387.54400634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTSEIYVHR_	ENSG00000089737|ENST00000621632|DDX24;ENST00000555762.1_1_14:94517539-94521656:-|nuORF;nc|ENSG00000089737|Q9GZR7-2|DDX24	68.62578634547417	0.14673074753754126	5				NaN	NaN	0	NaN	1785	3035	4821
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4823	18.464	NaN	2826	30	0	712.72	0.106			+	10826	FARIFDSK	8	60	513.2754037620637	1024.5362545909272	2	513.2761840820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))FARIFDSK_	REV__ENST00000445273.6_1_13:31711006-31711054:-|nuORF	74.25504064058377	0.37144338840759816	5				NaN	NaN	0	NaN	1786	3035	4821
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4824	18.466	NaN	2321.1	30	0	429.78	0.106			+	25087	LLNEAGTRMR	10	55	580.8119792382261	1159.609405543252	2	580.8126220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LLNEAGTRMR_	REV__ENSG00000131941|ENST00000254260|RHPN2;REV__RHPN2|p.L194Pfs*53|1|0.13|ENSG00000131941|chr19:33011691-33011691|A/-|frameshift_variant	32.81241826257853	0.6118718159329168	5				NaN	NaN	0	NaN	1787	3035	4821
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4825	18.468	NaN	1298.9	30	0	199.32	0.106			+	16635	HHLEVGYM	8	50	493.22982126874024	NaN	0	493.2298889160156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HHLEVGYM_	REV__EPB41L3|p.D299E|1|0.24|ENSG00000082397|chr18:5433484-5433484|A/T|missense_variant	37.028477286268924	1.7418937515398478	5				NaN	NaN	0	NaN	1788	3035	4821
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4826	18.47	NaN	1939.2	30	0	498.75	0.106			+	-1	RTRPRLRCA	9	44	395.89728829147566	NaN	0	395.56280517578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_RTRPRLRC(Carbamidomethyl (C))A_	REV__ENST00000520584.5_1_8:144329158-144329458:+|nuORF	36.446750945000026	0.29355505452396785	5				NaN	NaN	0	NaN	1789	3035	4821
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4827	18.471	NaN	1143.4	30	0	293.79	0.036				-1	LYSLTLRC	8	33	342.5196533203125	NaN	0	342.5196533203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_LYSLTLRC(Carbamidomethyl (C))_	TNK1|p.A356T|1|0.4|ENSG00000174292|chr17:7384683-7384683|G/A|missense_variant	24.20275056022122	1.7418937515398478	5				NaN	NaN	0	NaN	1790	3035	4821
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4839	18.497	NaN	5751.9	30	0	1220.5	0.214	+			44889	TTVVTTKSA	9	63	454.25810286270826	906.5016527922165	2	454.25799560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTVVTTKSA_	CON__P05784	79.45101966838831	0.09992237243120712	5				NaN	NaN	0	NaN	1799	3038	4838
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4840	18.5	NaN	12168	30	0	4337.6	0.106	+			14482	GTCGKSLISK	10	71	525.7839175740781	1049.5532822149562	2	525.7845458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GTC(Carbamidomethyl (C))GKSLISK_	ENSG00000118322|ENST00000327245|ATP10B	114.85826248499774	0.03459167991829056	5				NaN	NaN	0	NaN	1800	3038	4838
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4841	18.502	NaN	2771.3	30	0	227.71	0.106			+	16087	HDEAGVGIYTH	11	62	599.7758480554631	1197.5371431777262	2	599.77587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HDEAGVGIYTH_	REV__ENST00000397861.6_1_17:54910427-54911098:-|nuORF	62.107414245175825	0.30464354921554965	5				NaN	NaN	0	NaN	1801	3038	4838
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4842	18.504	NaN	1014.8	30	0	162.84	0.106	+			494	ACALDSDGTL	10	43	483.2153076932722	NaN	0	483.2152404785156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ACALDSDGTL_	ENSG00000077348|ENST00000221233|EXOSC5	44.116797842482775	0.3427969396372342	5				NaN	NaN	0	NaN	1802	3038	4838
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4843	18.506	NaN	902.93	30	0	134.41	0.033	+			2904	ASAVTQVAK	9	41	437.75287473677855	NaN	0	437.7528381347656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASAVTQVAK_	ENSG00000092108|ENST00000458591|SCFD1;nc|ENSG00000092108|Q8WVM8-2|SCFD1;nc|ENSG00000092108|Q8WVM8-3|SCFD1;SCFD1|p.V202Cfs*43|1|0.35|ENSG00000092108|chr14:30643389-30643390|-/T|frameshift_variant	56.43379154798735	0.16452882468284893	5				NaN	NaN	0	NaN	1803	3038	4838
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4851	18.524	NaN	6087.4	30	0	2295.8	0.214				-1	GTCGKSLISK	10	53	350.8584076220801	1049.5533934664404	3	350.8586120605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GTC(Carbamidomethyl (C))GKSLISK_	ENSG00000118322|ENST00000327245|ATP10B	41.080066990542036	0.5391928043837881	5				NaN	NaN	0	NaN	1808	3041	4850
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4852	18.528	NaN	2100.3	30	0	399.33	0.106	+			3337	ASMPDNTAAQK	11	47	567.2665691325969	1132.5185853319938	2	567.2664184570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASMPDNTAAQK_	ENSG00000100345|ENST00000216181|MYH9;ENSG00000133392|ENST00000300036|MYH11;MYH9|p.I784*|1|0.07|ENSG00000100345|chr22:36304036-36304036|G/-|frameshift_variant;nc|ENSG00000100345|P35579-2|MYH9;nc|ENSG00000133392|P35749-2|MYH11;nc|ENSG00000133392|P35749-3|MYH11;nc|ENSG00000133392|P35749-4|MYH11	47.227680397652996	0.4590463137409202	5				NaN	NaN	0	NaN	1809	3041	4850
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4853	18.53	NaN	912.66	30	0	152.61	0.106	+			20681	KGNSPLLQK	9	47	492.7952691107262	983.5759852882525	2	492.7955017089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KGNSPLLQK_	ASCC2|p.R715Efs*40|1|0.04|ENSG00000100325|chr22:29789144-29789144|G/-|frameshift_variant;ENSG00000100325|ENST00000307790|ASCC2;ENST00000458594.5_1_22:30197094-30223519:-|nuORF;ENST00000465667.6_1_22:30218318-30228314:-|nuORF;nc|ENSG00000100325|Q9H1I8-2|ASCC2;nc|ENSG00000100325|Q9H1I8-3|ASCC2	63.53385203322761	0.18415635464017938	5				NaN	NaN	0	NaN	1810	3041	4850
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4854	18.532	NaN	1506	30	0	270.19	0.106			+	33219	RFPAPRRR	8	56	528.3201613819397	NaN	0	528.31982421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RFPAPRRR_	REV__nc|ENSG00000119408|Q9HC98-3|NEK6	31.954861631926434	1.7418937515398478	5				NaN	NaN	0	NaN	1811	3041	4850
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4855	18.533	NaN	2918.3	30	0	668.05	0.037	+			23355	KYTPPPHHI	9	48	363.8660335820791	1088.5762713464374	3	363.8663635253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KYTPPPHHI_	ENSG00000168653|ENST00000372969|NDUFS5	71.87747018426188	0.13267044672804276	5				NaN	NaN	0	NaN	1812	3041	4850
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4868	18.561	NaN	5254.1	30	0	629.84	0.214	+			47949	VSMGHSISK	9	62	473.2446337502344	944.4747145672688	2	473.2442626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSMGHSISK_	ENSG00000186017|ENST00000452939|ZNF566;ZNF566|p.F128Lfs*25|1|0.12|ENSG00000186017|chr19:36449850-36449850|A/-|frameshift_variant;ZNF566|p.P52Q|1|0.3|ENSG00000186017|chr19:36472988-36472988|G/T|missense_variant	106.68306549817024	0.032382560583716295	5				NaN	NaN	0	NaN	1822	3044	4867
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4869	18.564	NaN	3485.4	30	0	538.8	0.106	+			40576	SVAEHPLSR	9	58	498.26698805839834	994.5194231835967	2	498.26690673828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVAEHPLSR_	ENSG00000142207|ENST00000382751|URB1;URB1|p.R2106W|1|0.08|ENSG00000142207|chr21:32316784-32316784|G/A|missense_variant	53.08895987439943	0.27122541748218487	5				NaN	NaN	0	NaN	1823	3044	4867
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4870	18.566	NaN	3805	30	0	890.29	0.106	+			39446	STEKIYIRK	9	43	379.8922862455187	1136.6550293367561	3	379.8921203613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STEKIYIRK_	ENSG00000120798|ENST00000333003|NR2C1;ENSG00000177463|ENST00000425241|NR2C2;ENST00000475707.5_1_3:15045421-15079667:+|nuORF;nc|ENSG00000120798|P13056-2|NR2C1;nc|ENSG00000120798|P13056-3|NR2C1;nc|ENSG00000177463|P49116-2|NR2C2;NR2C2|p.F563Lfs*10|1|0.4|ENSG00000177463|chr3:15042899-15042899|T/-|frameshift_variant	51.19269402634007	0.2889735674168909	5				NaN	NaN	0	NaN	1824	3044	4867
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4871	18.568	NaN	1868.5	30	0	416.27	0.106	+			3080	ASFVVFLIQ	9	54	512.2954979523078	NaN	0	512.73828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASFVVFLIQ_	ABCA1|p.L2013*|1|0.14|ENSG00000165029|chr9:104788457-104788457|A/-|frameshift_variant;ENSG00000165029|ENST00000374736|ABCA1	33.921630207806714	0.3063038642147651	5				NaN	NaN	0	NaN	1825	3044	4867
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4872	18.57	NaN	515.64	30	0	133.54	0.106	+			37450	SLIKIRRLFH	10	18	428.2737731933594	NaN	0	428.2737731933594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SLIKIRRLFH_	ENSG00000163645|ENST00000295910|ERICH6;nc|ENSG00000163645|Q7L0X2-2|ERICH6;nc|ENSG00000163645|Q7L0X2-3|ERICH6	7.804521658770766	0.4201028297492154	5				NaN	NaN	0	NaN	1826	3044	4867
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4873	18.572	NaN	858.08	30	0	69.258	0.034			+	30777	QDSPQLHF	8	40	486.23406982421875	NaN	0	486.23406982421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QDSPQLHF_	REV__ENSG00000143061|ENST00000369486|IGSF3;REV__IGSF3|p.G763Afs*27|2|0.32|ENSG00000143061|chr1:116588846-116588846|C/-|frameshift_variant;REV__IGSF3|p.R1001Gfs*34|1|0.12|ENSG00000143061|chr1:116579725-116579725|T/-|frameshift_variant;REV__nc|ENSG00000143061|O75054-2|IGSF3	25.450171626174864	1.7418937515398478	5				NaN	NaN	0	NaN	1827	3044	4867
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4887	18.601	NaN	844910	30	0	265260	0.184	+			2999	ASFDKAKLK	9	126	504.2975311917768	1006.5805094503536	2	504.2979736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASFDKAKLK_	ENSG00000034510|ENST00000233143|TMSB10	146.78539889680295	0.007618400906539062	5				NaN	NaN	0	NaN	1838	3047	4886
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4888	18.604	NaN	11469	30	0	4004.9	0.106	+			14444	GTATTMVSK	9	64	448.2308195426182	NaN	0	448.23101806640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTATTMVSK_	ENSG00000204217|ENST00000374580|BMPR2	163.1509380574825	0.013195146407114593	5				NaN	NaN	0	NaN	1839	3047	4886
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4889	18.606	NaN	2779.5	30	0	258.72	0.106				-1	KVLYDEMI	8	64	513.7640380859375	NaN	0	513.7640380859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_KVLYDEM(Oxidation (M))I_	tr|U7SV64|U7SV64_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01531PE=4SV=1	50.0245360154114	1.7418937515398478	5				NaN	NaN	0	NaN	1840	3047	4886
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4890	18.608	NaN	5081.3	30	0	1262.9	0.106	+			4091	ATDNAKIIGK	10	59	515.7979736328125	NaN	0	515.7979736328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATDNAKIIGK_	ENSG00000135945|ENST00000258428|REV1;ENST00000413697.5_1_2:100019089-100065949:-|nuORF;nc|ENSG00000135945|Q9UBZ9-2|REV1;REV1|p.T1079Pfs*12|1|0.42|ENSG00000135945|chr2:99403038-99403038|T/-|frameshift_variant	61.691277971877994	0.22046696034287383	5				NaN	NaN	0	NaN	1841	3047	4886
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4891	18.61	NaN	736.64	30	0	53.165	0.106			+	48032	VSRPSAVPT	9	43	457.2585144042969	NaN	0	457.2585144042969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSRPSAVPT_	REV__ENSG00000053747|ENST00000313654|LAMA3;REV__nc|ENSG00000053747|Q16787-1|LAMA3;REV__nc|ENSG00000053747|Q16787-3|LAMA3;REV__nc|ENSG00000053747|Q16787-4|LAMA3	24.519189625965996	0.35377483217337163	5				NaN	NaN	0	NaN	1842	3047	4886
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4892	18.612	NaN	2278	30	0	290.57	0.106	+			15966	HAHVDKVTY	9	65	535.2753295898438	NaN	0	535.2753295898438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HAHVDKVTY_	ENSG00000181396|ENST00000313056|OGFOD3;nc|ENSG00000181396|Q6PK18-2|OGFOD3	77.31757898189308	0.08057531075035683	5				NaN	NaN	0	NaN	1843	3047	4886
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4893	18.613	NaN	992.53	30	0	193.13	0.034			+	41348	SVLVTGSRL	9	50	466.2816467285156	NaN	0	466.2816467285156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVLVTGSRL_	REV__ENSG00000253846|ENST00000398610|PCDHGA10;REV__nc|ENSG00000253846|Q9Y5H3-2|PCDHGA10	23.04248740728303	0.3589936788096251	5				NaN	NaN	0	NaN	1844	3047	4886
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4914	18.661	NaN	14302	30	0	2584.1	0.214	+			3731	ATAAVSSMK	9	58	433.2259702720216	864.4373876108432	2	433.2254943847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATAAVSSMK_	ADD3-MXI1|1|fusion;ENSG00000148700|ENST00000356080|ADD3;nc|ENSG00000148700|Q9UEY8-2|ADD3	172.24860141594272	0.002383092361811508	5				NaN	NaN	0	NaN	1859	3053	4913
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4915	18.665	NaN	6513.5	30	0	1734.2	0.106	+			39486	STFGLSSKE	9	56	478.24012390544743	954.4656948776949	2	478.2395935058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STFGLSSKE_	PRR14L|p.I1216L|1|0.2|ENSG00000183530|chr22:31714193-31714193|T/G|missense_variant	66.42927471994793	0.16001998865088202	5				NaN	NaN	0	NaN	1860	3053	4913
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4916	18.667	NaN	2190.7	30	0	646.83	0.106	+			21370	KMERPGRR	8	59	515.2884564039766	NaN	0	515.2882690429688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KMERPGRR_	ENST00000431844.6_1_2:113993137-113993445:+|nuORF	47.657333605630114	1.7418937515398478	5				NaN	NaN	0	NaN	1861	3053	4913
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4917	18.669	NaN	2929.3	30	0	780.43	0.106			+	29708	PHFILPLT	8	58	469.27997311625097	NaN	0	469.2799377441406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PHFILPLT_	REV__ENST00000460323.1_1_1:151275853-151278830:-|nuORF	46.76643321282427	1.7418937515398478	5				NaN	NaN	0	NaN	1862	3053	4913
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4918	18.67	NaN	1915.3	30	0	195.55	0.106			+	-1	KIMELAVLG	9	56	495.28973388671875	NaN	0	495.28973388671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_KIM(Oxidation (M))ELAVLG_	REV__ENSG00000033178|ENST00000322244|UBA6;REV__nc|ENSG00000033178|A0AVT1-2|UBA6	30.503639358989545	0.3235605894931338	5				NaN	NaN	0	NaN	1863	3053	4913
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4919	18.672	NaN	1128.1	30	0	392.2	0.035			+	43822	TLRAGSSLKG	10	25	330.5304953963938	NaN	0	330.530517578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TLRAGSSLKG_	REV__DNAH3|p.E3315Dfs*37|1|0.1|ENSG00000158486|chr16:20963939-20963940|-/A|frameshift_variant;REV__DNAH3|p.G2194Efs*14|1|0.34|ENSG00000158486|chr16:20997303-20997303|C/-|frameshift_variant;REV__DNAH3|p.I2375Sfs*8|1|0.13|ENSG00000158486|chr16:20985619-20985619|T/-|frameshift_variant;REV__DNAH3|p.V2829Yfs*9|1|0.43|ENSG00000158486|chr16:20965399-20965399|C/-|frameshift_variant;REV__ENSG00000158486|ENST00000698260|DNAH3;REV__ENST00000572640.5_1_16:21008599-21073979:-|nuORF;REV__nc|ENSG00000158486|Q8TD57-3|DNAH3;REV__nc|ENSG00000158486|Q8TD57|DNAH3	15.641811463095205	0.4201028297492154	5				NaN	NaN	0	NaN	1864	3053	4913
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4931	18.697	NaN	7580.1	30	0	1987.1	0.214			+	-1	SNEQPCYGL	9	67	534.2280830933191	1066.4416132534382	2	534.2293701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SNEQPC(Carbamidomethyl (C))YGL_	REV__ENSG00000154263|ENST00000690296|ABCA10;REV__ENST00000519732.5_1_17:67144970-67171813:-|nuORF;REV__ENST00000522406.5_1_17:67144970-67178294:-|nuORF;REV__nc|ENSG00000154263|Q8WWZ4-2|ABCA10	45.9519527083369	0.35044536499095585	5				NaN	NaN	0	NaN	1873	3056	4930
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4932	18.701	NaN	1554.6	30	0	138.02	0.106			+	22074	KSLDSELGVP	10	66	522.7841603852609	1043.5537678373216	2	522.7855224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KSLDSELGVP_	REV__ENSG00000159314|ENST00000685559|ARHGAP27;REV__nc|ENSG00000159314|Q6ZUM4-2|ARHGAP27;REV__nc|ENSG00000159314|Q6ZUM4-3|ARHGAP27	71.87747018426188	0.26198133118427214	5				NaN	NaN	0	NaN	1874	3056	4930
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4933	18.703	NaN	3039.2	30	0	1253.7	0.106	+			4733	ATMKTELQK	9	50	525.2862637961637	1048.5579746591272	2	525.2868041992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATMKTELQK_	ENSG00000096696|ENST00000379802|DSP;nc|ENSG00000096696|P15924-2|DSP;nc|ENSG00000096696|P15924-3|DSP	82.7504851949679	0.08565546331141553	5				NaN	NaN	0	NaN	1875	3056	4930
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4934	18.705	NaN	1055.3	30	0	131.46	0.106	+			6857	CKSCGAHFAN	10	42	547.728404276972	1093.442255620744	2	547.7289428710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_CKSC(Carbamidomethyl (C))GAHFAN_	ENSG00000092871|ENST00000394597|RFFL;nc|ENSG00000092871|Q8WZ73-2|RFFL;nc|ENSG00000092871|Q8WZ73-3|RFFL	45.97224482568171	0.49411383603842696	5				NaN	NaN	0	NaN	1876	3056	4930
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4935	18.707	NaN	1311.7	30	0	171.49	0.106	+			42282	TADPSHQTM	9	47	494.2136518459569	986.4127507587139	2	494.2134704589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TADPSHQTM_	ENSG00000196141|ENST00000409140|SPATS2L;nc|ENSG00000196141|Q9NUQ6-2|SPATS2L;nc|ENSG00000196141|Q9NUQ6-3|SPATS2L;nc|ENSG00000196141|Q9NUQ6-4|SPATS2L	49.536043120802724	0.308405419312776	5				NaN	NaN	0	NaN	1877	3056	4930
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4936	18.708	NaN	5883.3	30	0	2188.6	0.036			+	5186	ATTLKACTLA	10	48	350.5268029331743	1048.558579399723	3	350.5270080566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_ATTLKAC(Carbamidomethyl (C))TLA_	REV__ENSG00000126749|ENST00000599672|EMG1	42.86426827375447	0.522752283233888	5				NaN	NaN	0	NaN	1878	3056	4930
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4937	18.709	NaN	738.71	30	0	96.244	0.141			+	44075	TPSVPILRSC	10	35	536.79248046875	NaN	0	536.79248046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TPSVPILRSC_	REV__ENSG00000101019|ENST00000374385|UQCC1;REV__nc|ENSG00000101019|Q9NVA1-2|UQCC1;REV__nc|ENSG00000101019|Q9NVA1-4|UQCC1;REV__nc|ENSG00000101019|Q9NVA1-5|UQCC1	20.94693142431847	0.4201028297492154	5				NaN	NaN	0	NaN	1879	3056	4930
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4951	18.74	NaN	2777.6	30	0	763.07	0.214	+			40096	STNSPVGVSK	10	57	488.2589486659291	974.5033443986582	2	488.2586364746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STNSPVGVSK_	ENSG00000165671|ENST00000439151|NSD1;nc|ENSG00000165671|Q96L73-2|NSD1;nc|ENSG00000165671|Q96L73-3|NSD1;NSD1|p.K1753Sfs*10|1|0.17|ENSG00000165671|chr5:177267669-177267669|A/-|frameshift_variant	63.42647028704847	0.33467688528802414	5				NaN	NaN	0	NaN	1890	3059	4950
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4952	18.744	NaN	1637.2	30	0	331.78	0.106	+			6260	AVSKLYASK	9	53	483.7843242949683	965.5540956567366	2	483.7842712402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVSKLYASK_	ENSG00000115561|ENST00000263856|CHMP3;ENST00000466032.1_1_2:86754275-86769420:-|nuORF;nc|ENSG00000115561|Q9Y3E7-2|CHMP3;nc|ENSG00000115561|Q9Y3E7-3|CHMP3	61.691277971877994	0.19951612995419254	5				NaN	NaN	0	NaN	1891	3059	4950
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4953	18.746	NaN	2024.8	30	0	406.43	0.106				-1	SVASCGNIF	9	48	477.7225252149346	953.4304974966692	2	477.72259521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SVASC(Carbamidomethyl (C))GNIF_	ENSG00000185798|ENST00000332629|WDR53	44.116797842482775	0.37197099687881774	5				NaN	NaN	0	NaN	1892	3059	4950
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4954	18.748	NaN	5517.5	30	0	732.14	0.106	+			40141	STQIVANAK	9	61	466.2639600175809	930.5133671019619	2	466.263427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STQIVANAK_	ENSG00000147872|ENST00000276914|PLIN2;PLIN2|p.V348*|1|0.15|ENSG00000147872|chr9:19116520-19116520|C/-|frameshift_variant	63.53385203322761	0.18415635464017938	5				NaN	NaN	0	NaN	1893	3059	4950
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4955	18.75	NaN	3213.3	30	0	1300.1	0.106			+	-1	AGMVMLFRSL	10	40	380.868118613317	1139.582526440151	3	380.867919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_AGMVM(Oxidation (M))LFRSL_	REV__ENSG00000051108|ENST00000439977|HERPUD1;REV__nc|ENSG00000051108|Q15011-2|HERPUD1;REV__nc|ENSG00000051108|Q15011-4|HERPUD1	29.170058357718403	0.6416167986984785	5				NaN	NaN	0	NaN	1894	3059	4950
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4956	18.751	NaN	2037.7	30	0	238.26	0.037	+			19987	KEIDKEEHL	9	59	570.7987146638393	NaN	0	570.7987060546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KEIDKEEHL_	ENSG00000154545|ENST00000471932|MAGED4;ENSG00000179222|ENST00000326587|MAGED1;ENSG00000187243|ENST00000335504|MAGED4B;ENST00000470594.5_1_X:51805328-51809606:-|nuORF;ENST00000479281.5_1_X:51931784-51932886:+|nuORF;ENST00000485420.5_1_X:51636757-51640983:+|nuORF;ENST00000494718.5_1_X:51640434-51640983:+|nuORF;MAGED1|p.P628Rfs*18|1|0.09|ENSG00000179222|chrX:51900215-51900215|C/-|frameshift_variant;nc|ENSG00000179222|Q9Y5V3-2|MAGED1;nc|ENSG00000187243|Q96JG8-2|MAGED4;nc|ENSG00000187243|Q96JG8-4|MAGED4	65.46538089061403	0.1260090208616529	5				NaN	NaN	0	NaN	1895	3059	4950
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4957	18.752	NaN	3516.4	30	0	380.38	0.14			+	1397	AEVREKQLS	9	59	530.2927248309365	1058.570896728673	2	530.29345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AEVREKQLS_	REV__ENSG00000175792|ENST00000322623|RUVBL1;REV__nc|ENSG00000175792|Q9Y265-2|RUVBL1	58.22992032128504	0.22837015374068087	5				NaN	NaN	0	NaN	1896	3059	4950
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4972	18.785	NaN	8736.3	30	0	1345.4	0.214	+			43361	TGDPNSKAL	9	60	451.7323044469977	901.4500559607955	2	451.7323303222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TGDPNSKAL_	ENSG00000172828|ENST00000303334|CES3;nc|ENSG00000172828|Q6UWW8-2|CES3	159.27591364854348	0.004707062175358555	5				NaN	NaN	0	NaN	1908	3062	4971
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4973	18.789	NaN	2997	30	0	385.36	0.106	+			20461	KEVKYDSSL	9	68	534.7822466770722	1067.5499404209443	2	534.7832641601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEVKYDSSL_	CA13|p.L149Yfs*65|1|0.26|ENSG00000185015|chr8:85266695-85266695|T/-|frameshift_variant;CA13|p.R46Q|1|0.09|ENSG00000185015|chr8:85250839-85250839|G/A|missense_variant;ENSG00000185015|ENST00000321764|CA13	45.97224482568171	0.3502073465782774	5				NaN	NaN	0	NaN	1909	3062	4971
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4974	18.791	NaN	3894.4	30	0	882.82	0.106			+	37317	SLDSIQTAP	9	48	466.24023600617124	930.4659190791425	2	466.239990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLDSIQTAP_	REV__ENSG00000008083|ENST00000341776|JARID2;REV__JARID2|p.E1073Kfs*106|1|0.17|ENSG00000008083|chr6:15512989-15512989|A/-|frameshift_variant;REV__JARID2|p.P592Lfs*57|2|0.38|ENSG00000008083|chr6:15496995-15496995|C/-|frameshift_variant;REV__JARID2|p.W677Mfs*133|1|0.53|ENSG00000008083|chr6:15500983-15500984|-/A|frameshift_variant;REV__nc|ENSG00000008083|Q92833-2|JARID2	52.936696900407355	0.27249468807391813	5				NaN	NaN	0	NaN	1910	3062	4971
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4975	18.793	NaN	2148.8	30	0	800.4	0.106	+			4875	ATQAVFQKR	9	27	350.2013854980469	NaN	0	350.2013854980469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATQAVFQKR_	ENSG00000100949|ENST00000216840|RABGGTA;ENST00000558534.5_1_14:24738716-24740321:-|nuORF;ENST00000560998.5_1_14:24737570-24740321:-|nuORF;RABGGTA|p.P160Lfs*5|1|0.17|ENSG00000100949|chr14:24269643-24269643|G/-|frameshift_variant;RABGGTA|p.Q194Sfs*43|1|0.31|ENSG00000100949|chr14:24269542-24269542|G/-|frameshift_variant	31.529811441608018	0.3183796599642538	5				NaN	NaN	0	NaN	1911	3062	4971
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4976	18.794	NaN	2096.4	30	0	433.59	0.106			+	31312	QILVMVAPA	9	59	471.27950037507617	940.5444478169524	2	471.7777099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QILVMVAPA_	REV__PCDHGC4|p.G258V|1|0.19|ENSG00000242419|chr5:141485946-141485946|G/T|missense_variant	33.51558372728122	0.4900267029546261	5				NaN	NaN	0	NaN	1912	3062	4971
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4977	18.796	NaN	753.65	30	0	85.233	0.106			+	39199	STAARVTVS	9	42	446.247314453125	NaN	0	446.247314453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STAARVTVS_	REV__ENST00000282570.3_1_2:70057088-70064689:+|nuORF	25.57405402267927	0.3484490411150625	5				NaN	NaN	0	NaN	1913	3062	4971
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4978	18.798	NaN	412.71	30	0	116.27	0.038				-1	LCFNDIAWST	10	17	606.273373173896	1210.5321934145918	2	606.2735595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LCFNDIAWST_	ENST00000398006.6_1_11:111709049-111709088:-|nuORF	11.096761811581379	0.7600613748674078	5				NaN	NaN	0	NaN	1914	3062	4971
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4991	18.825	NaN	4009.1	30	0	531.72	0.214	+			20141	KEKPEEESL	9	69	544.7767794676754	1087.5390060021507	2	544.7772827148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEKPEEESL_	ENSG00000148396|ENST00000684901|SEC16A;nc|ENSG00000148396|O15027-2|SEC16A;nc|ENSG00000148396|O15027-3|SEC16A;nc|ENSG00000148396|O15027-4|SEC16A;nc|ENSG00000148396|O15027-5|SEC16A;SEC16A|p.P2155Hfs*25|1|0.25|ENSG00000148396|chr9:136447664-136447664|G/-|frameshift_variant	109.47833844074708	0.029530294723441826	5				NaN	NaN	0	NaN	1924	3065	4990
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4992	18.829	NaN	8458.9	30	0	1321.3	0.106	+			34558	RVLEAIQKK	9	65	362.23282011201513	1083.6766309362454	3	362.2327575683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RVLEAIQKK_	ENSG00000169375|ENST00000394947|SIN3A;SIN3A|p.G659Afs*26|1|0.14|ENSG00000169375|chr15:75396375-75396375|C/-|frameshift_variant	140.11223852658463	0.010427410095706195	5				NaN	NaN	0	NaN	1925	3065	4990
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4993	18.831	NaN	1546	30	0	216.42	0.106	+			33536	RLCALRASKN	10	61	566.3234013410065	NaN	0	566.3231201171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RLCALRASKN_	DGKK|p.D376N|1|0.22|ENSG00000274588|chrX:50403550-50403550|C/T|missense_variant	41.080066990542036	0.36199559365313844	5				NaN	NaN	0	NaN	1926	3065	4990
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4994	18.833	NaN	2331.5	30	0	694.19	0.106	+			3604	ASVPAQAPK	9	53	434.7480447509917	867.4815365687834	2	434.747802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASVPAQAPK_	ENSG00000162244|ENST00000294189|RPL29;ENST00000480306.5_1_3:52027767-52028806:-|nuORF	49.44154591367651	0.3095138337212152	5				NaN	NaN	0	NaN	1927	3065	4990
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4995	18.834	NaN	1110.1	30	0	234.29	0.106			+	-1	HVIHACGEI	9	31	518.2538829196687	NaN	0	518.2543334960938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_HVIHAC(Carbamidomethyl (C))GEI_	REV__ENSG00000116761|ENST00000370938|CTH;REV__nc|ENSG00000116761|P32929-3|CTH	25.450171626174864	0.34907449758287085	5				NaN	NaN	0	NaN	1928	3065	4990
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4996	18.836	NaN	1863.6	30	0	166.66	0.034	+			12098	GAAVVMLLPA	10	53	471.27950037507617	940.5444478169524	2	471.77825927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GAAVVMLLPA_	ENSG00000227500|ENST00000316097|SCAMP4;ENST00000472442.2_1_19:1922970-1924280:+|nuORF;nc|ENSG00000227500|Q969E2-2|SCAMP4	35.200714571348534	0.5923680232273616	5				NaN	NaN	0	NaN	1929	3065	4990
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4997	18.837	NaN	1449.3	30	0	144.13	0.143	+			15723	GVRPGGNF	8	40	402.2124582722797	NaN	0	402.21295166015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GVRPGGNF_	ENSG00000105376|ENST00000221980|ICAM5	26.79610172149135	1.7418937515398478	5				NaN	NaN	0	NaN	1930	3065	4990
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5011	18.868	NaN	2449.2	30	0	498.28	0.215	+			40000	STMSACASTAR	11	63	571.7501058230437	1141.4856587128872	2	571.75048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_STMSAC(Carbamidomethyl (C))ASTAR_	ENST00000566749.5_1_16:30094754-30094823:+|nuORF	102.0615471778698	0.05642515548841253	5				NaN	NaN	0	NaN	1941	3068	5010
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5012	18.872	NaN	18008	30	0	5165.2	0.106	+			3982	ATATVSVGK	9	59	417.2398746176981	832.4651963021962	2	417.2399597167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATATVSVGK_	ENSG00000261150|ENST00000615648|EPPK1;EPPK1|p.G2015Vfs*36|2|0.33|ENSG00000261150|chr8:143867210-143867210|C/-|frameshift_variant;EPPK1|p.Q829Rfs*8|1|0.05|ENSG00000261150|chr8:143870770-143870770|C/-|frameshift_variant;EPPK1|p.Y695Ifs*68|1|0.36|ENSG00000261150|chr8:143871171-143871172|-/T|frameshift_variant	132.757866228626	0.013877640931359021	5				NaN	NaN	0	NaN	1942	3068	5010
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5013	18.874	NaN	976.85	30	0	139.87	0.106			+	-1	GEMETMTL	8	36	464.19359332511925	926.3726337170385	2	464.2115783691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_GEM(Oxidation (M))ETMTL_	REV__ENSG00000096968|ENST00000381652|JAK2;REV__JAK2|p.F556Lfs*12|1|0.35|ENSG00000096968|chr9:5072515-5072515|T/-|frameshift_variant;REV__JAK2|p.P501Qfs*10|1|0.06|ENSG00000096968|chr9:5069193-5069193|C/-|frameshift_variant	25.450171626174864	0.7628259754767981	5				NaN	NaN	0	NaN	1943	3068	5010
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5014	18.876	NaN	3432.9	30	0	2194.3	0.038	+			19867	KEELMERLK	9	37	392.5536804199219	NaN	0	392.5536804199219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEELMERLK_	ENSG00000137710|ENST00000645495|RDX;ENSG00000147065|ENST00000360270|MSN;nc|ENSG00000137710|P35241-4|RDX;nc|ENSG00000137710|P35241-5|RDX;RDX|p.R342C|1|0.2|ENSG00000137710|chr11:110247769-110247769|G/A|missense_variant	28.081489160057373	0.33578952234132536	5				NaN	NaN	0	NaN	1944	3068	5010
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5030	18.909	NaN	3088.9	30	0	369.29	0.214	+			20175	KEKVSTQNL	9	64	523.7958531774541	NaN	0	523.795654296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEKVSTQNL_	ENSG00000100342|ENST00000397278|APOL1;nc|ENSG00000100342|O14791-2|APOL1;nc|ENSG00000100342|O14791-3|APOL1	99.01295224348159	0.023427377858318825	5				NaN	NaN	0	NaN	1957	3071	5029
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5031	18.913	NaN	1410.2	30	0	204.64	0.106	+			29653	PGLAGKNG	8	31	357.20044285675976	NaN	0	357.2004699707031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PGLAGKNG_	COL6A2|p.P584Lfs*12|1|0.46|ENSG00000142173|chr21:46124896-46124896|C/-|frameshift_variant;ENSG00000142173|ENST00000300527|COL6A2;nc|ENSG00000142173|P12110-2|COL6A2;nc|ENSG00000142173|P12110-3|COL6A2	20.481830146152948	1.741893751539848	5				NaN	NaN	0	NaN	1958	3071	5029
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5032	18.915	NaN	2412.6	30	0	783.14	0.106			+	7382	DDTSKKIE	8	53	468.2375512639534	934.4605495947068	2	468.23724365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DDTSKKIE_	REV__ENSG00000137501|ENST00000359152|SYTL2;REV__SYTL2|p.Q663Tfs*35|1|0.14|ENSG00000137501|chr11:85709344-85709345|-/T|frameshift_variant	54.776311868738084	0.5534952410049249	5				NaN	NaN	0	NaN	1959	3071	5029
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5033	18.916	NaN	5511.5	30	0	1038.7	0.106	+			39989	STMPHTSGMNR	11	54	609.7708620859102	1217.5271712386202	2	609.7715454101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STMPHTSGMNR_	ENSG00000150907|ENST00000379561|FOXO1	77.53327743719008	0.17293716712445248	5				NaN	NaN	0	NaN	1960	3071	5029
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5034	18.918	NaN	6237.9	30	0	2731.5	0.106	+			22674	KVACIGAWHPA	11	54	384.87188004180103	1151.5938107256031	3	384.8718566894531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KVACIGAWHPA_	ENSG00000100316|ENST00000216146|RPL3;ENSG00000140986|ENST00000268661|RPL3L;ENST00000413027.1_1_6:31248141-31248948:+|nuORF;ENST00000481985.5_1_22:39710087-39711482:-|nuORF	27.047317107675042	0.7060868989289394	5				NaN	NaN	0	NaN	1961	3071	5029
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5035	18.92	NaN	4182.7	30	0	778.24	0.106			+	13627	GMGLFIPWLW	10	53	407.2162596060381	NaN	0	407.2158508300781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GMGLFIPWLW_	REV__ATP2B1|p.S1044P|1|0.27|ENSG00000070961|chr12:89601364-89601364|A/G|missense_variant	39.252832667884924	0.37128895876774715	5				NaN	NaN	0	NaN	1962	3071	5029
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5036	18.922	NaN	610.16	30	0	72.544	0.036	+			46103	VDEEVESLH	9	37	528.7476196289062	NaN	0	528.7476196289062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VDEEVESLH_	DNAJC13|p.G1667Vfs*22|1|0.33|ENSG00000138246|chr3:132505410-132505410|A/-|frameshift_variant;DNAJC13|p.I470Tfs*3|1|0.04|ENSG00000138246|chr3:132457327-132457328|-/CATTT|frameshift_variant;DNAJC13|p.T1375Hfs*28|1|0.18|ENSG00000138246|chr3:132496626-132496626|A/-|frameshift_variant;ENSG00000138246|ENST00000260818|DNAJC13;ENST00000471925.1_1_3:132175145-132176248:+|nuORF	38.80614096846853	0.28164298475537564	5				NaN	NaN	0	NaN	1963	3071	5029
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5050	18.952	NaN	16682	30	0	6404.1	0.214	+			3000	ASFDKAKLK	9	66	504.2975311917768	1006.5805094503536	2	504.2977600097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASFDKAKLK_	ENSG00000034510|ENST00000233143|TMSB10	117.81106730687013	0.02252488733980868	5				NaN	NaN	0	NaN	1974	3074	5049
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5051	18.955	NaN	2589.8	30	0	1005.5	0.106	+			42882	TEHAHQVVV	9	44	510.2668794859384	1018.5192060386768	2	510.2669677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEHAHQVVV_	ENSG00000071127|ENST00000499869|WDR1	54.776311868738084	0.25715957988447635	5				NaN	NaN	0	NaN	1975	3074	5049
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5052	18.957	NaN	2001.7	30	0	248.12	0.106				-1	 	0	43	366.73424871354524	NaN	0	366.7342834472656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1976	3074	5049
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5053	18.959	NaN	7217.8	30	0	2137	0.106	+			42264	TAATAVSLK	9	62	431.2557430960165	860.496933258833	2	431.25543212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TAATAVSLK_	ENSG00000224389|ENST00000435363|C4B	69.6276240434122	0.14239879520340665	5				NaN	NaN	0	NaN	1977	3074	5049
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5054	18.961	NaN	1018.5	30	0	141.68	0.106	+			25493	LPSENHKEM	9	43	542.7587280273438	NaN	0	542.7587280273438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LPSENHKEM_	ENSG00000025772|ENST00000372813|TOMM34	37.50817390946774	0.28819615062043347	5				NaN	NaN	0	NaN	1978	3074	5049
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5055	18.963	NaN	2699.6	30	0	352.45	0.035	+			38648	SSIEKTISK	9	60	496.7841417048867	991.5537304765734	2	496.78369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSIEKTISK_	nc|ENSG00000211892|P01861-1|IGHG4;nc|ENSG00000211892|P01861|IGHG4	120.30596017624542	0.02101454110788768	5				NaN	NaN	0	NaN	1979	3074	5049
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5056	18.963	NaN	745.63	30	0	89.404	0.139	+			20405	KETGGVEKL	9	50	480.771484375	NaN	0	480.771484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KETGGVEKL_	ENSG00000164754|ENST00000297338|RAD21	36.446750945000026	0.29355505452396785	5				NaN	NaN	0	NaN	1980	3074	5049
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5074	19.002	NaN	18735	30	0	2534.4	0.215	+			49325	VVSEKQFSK	9	77	526.2924382708927	1050.5703236085853	2	526.29296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVSEKQFSK_	ENSG00000163584|ENST00000295830|RPL22L1	88.1336951990783	0.07012705547711102	5				NaN	NaN	0	NaN	1995	3077	5073
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5075	19.006	NaN	11497	30	0	1003.2	0.106				-1	DHHQEVIGFCR	11	66	466.5516735017396	1396.6331911054187	3	466.5513610839844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_DHHQEVIGFC(Carbamidomethyl (C))R_	ENSG00000048828|ENST00000277165|FAM120A;FAM120A|p.V551Sfs*6|1|0.21|ENSG00000048828|chr9:93529491-93529491|C/-|frameshift_variant;nc|ENSG00000048828|Q9NZB2-2|FAM120A;nc|ENSG00000048828|Q9NZB2-4|FAM120A;nc|ENSG00000048828|Q9NZB2-5|FAM120A;nc|ENSG00000048828|Q9NZB2-6|FAM120A	33.03940026070387	0.6432348334061824	5				NaN	NaN	0	NaN	1996	3077	5073
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5076	19.008	NaN	21183	30	0	10176	0.106			+	44044	TPPTQLQIPG	10	52	351.19757382236736	1050.570892067302	3	351.1975402832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TPPTQLQIPG_	REV__DMBT1|p.R2407Tfs*79|1|0.41|ENSG00000187908|chr10:122643366-122643367|-/C|frameshift_variant	41.42661286455405	0.5359995577334734	5				NaN	NaN	0	NaN	1997	3077	5073
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5077	19.01	NaN	1462	30	0	296.6	0.106			+	24423	LGASGGAVIQ	10	40	436.7459016024693	871.4772502717386	2	436.74578857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LGASGGAVIQ_	REV__ENSG00000183032|ENST00000331299|SLC25A21;REV__nc|ENSG00000183032|Q9BQT8-2|SLC25A21	56.72105179125745	0.3956618550748046	5				NaN	NaN	0	NaN	1998	3077	5073
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5078	19.012	NaN	2205.9	30	0	334.67	0.106			+	1120	AELNRSPLQ	9	61	514.2796180524499	1026.5446831716997	2	514.28076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AELNRSPLQ_	REV__ENSG00000132326|ENST00000254657|PER2	64.20726635412375	0.17854274437659667	5				NaN	NaN	0	NaN	1999	3077	5073
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5079	19.013	NaN	3706.1	30	0	483.8	0.033	+			45900	VAQGASKAL	9	48	422.7482191627141	843.4818853922283	2	422.74786376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VAQGASKAL_	ENSG00000275395|ENST00000616721|FCGBP;nc|ENSG00000275395|Q9Y6R7|FCGBP	98.58198989935565	0.04066992115528678	5				NaN	NaN	0	NaN	2000	3077	5073
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5080	19.014	NaN	3614.6	30	0	515.84	0.141	+			34331	RTNWPNTGK	9	71	537.2779888479785	1072.5414247627568	2	537.2784423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RTNWPNTGK_	ENSG00000135249|ENST00000257700|RINT1	107.45493779368988	0.031594950556992824	5				NaN	NaN	0	NaN	2001	3077	5073
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5093	19.043	NaN	13977	30	0	3855	0.214			+	26451	LTGTARGSI	9	68	438.25097425414833	874.4873955750967	2	438.2508850097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LTGTARGSI_	REV__ENST00000515158.5_1_5:179050143-179050595:-|nuORF	51.33545320467046	0.2872990594074956	5				NaN	NaN	0	NaN	2011	3080	5092
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5094	19.047	NaN	1117.4	30	0	141.72	0.106			+	33792	RQGEPKLR	8	50	492.290618331489	NaN	0	492.291015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RQGEPKLR_	REV__ENSG00000109265|ENST00000682029|CRACD	29.14955571784316	1.7418937515398478	5				NaN	NaN	0	NaN	2012	3080	5092
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5095	19.049	NaN	859.23	30	0	262.76	0.106			+	29874	PLHARAASVAK	11	31	560.8345947265625	NaN	0	560.8345947265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PLHARAASVAK_	REV__ENSG00000254585|ENST00000650528|MAGEL2	29.550750289552195	0.43372083775723597	5				NaN	NaN	0	NaN	2013	3080	5092
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5096	19.05	NaN	2145.8	30	0	349.92	0.106	+			18190	IMDQLRNL	8	56	501.7731173489769	1001.5316817647538	2	501.773193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IMDQLRNL_	ENSG00000164758|ENST00000297347|MED30;ENST00000519391.1_1_8:118542904-118552214:+|nuORF;nc|ENSG00000164758|Q96HR3-2|MED30	44.116797842482775	0.6307669463330267	5				NaN	NaN	0	NaN	2014	3080	5092
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5097	19.052	NaN	911.95	30	0	92.285	0.035			+	24306	LFGKPDRVP	9	48	514.7982520263809	1027.5819511195616	2	517.275146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LFGKPDRVP_	REV__ENSG00000173821|ENST00000582970|RNF213;REV__nc|ENSG00000173821|Q63HN8-4|RNF213;REV__nc|ENSG00000173821|Q63HN8|RNF213;REV__RNF213|p.C5022Lfs*7|1|0.3|ENSG00000173821|chr17:80389237-80389237|G/-|frameshift_variant	18.262085536374414	0.6112419832031293	5				NaN	NaN	0	NaN	2015	3080	5092
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5114	19.087	NaN	3296.6	30	0	431.43	0.214			+	42405	TAKGAGAPK	9	56	400.73480692458725	799.4550609159745	2	400.73480224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAKGAGAPK_	REV__ENST00000419888.1_1_20:18763070-18763415:-|nuORF	51.33545320467046	0.2872990594074956	5				NaN	NaN	0	NaN	2029	3083	5113
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5115	19.09	NaN	9793.9	30	0	2447	0.106	+			21577	KPGDSLPTSQ	10	65	515.2636798391645	1028.512806745129	2	515.2645874023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KPGDSLPTSQ_	ENSG00000009709|ENST00000420770|PAX7;nc|ENSG00000009709|P23759-1|PAX7;nc|ENSG00000009709|P23759-2|PAX7	65.46538089061403	0.31613324008013116	5				NaN	NaN	0	NaN	2030	3083	5113
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5116	19.092	NaN	2006.6	30	0	849.4	0.106			+	35426	SARRFQKL	8	29	335.86972415120033	1004.5873430538011	3	335.8697204589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SARRFQKL_	REV__ENST00000429090.5_2_3:69828145-69928374:+|nuORF	29.14955571784316	0.7342621283720113	5				NaN	NaN	0	NaN	2031	3083	5113
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5117	19.094	NaN	3597.8	30	0	397.32	0.106	+			16526	HEVKEAQTL	9	64	527.7799466793601	1053.5453404255202	2	527.7814331054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HEVKEAQTL_	ENSG00000127603|ENST00000564288|MACF1;MACF1|p.A5223Lfs*8|1|0.21|ENSG00000127603|chr1:39388486-39388486|G/-|frameshift_variant;MACF1|p.N4824Kfs*19|1|0.33|ENSG00000127603|chr1:39387292-39387293|-/A|frameshift_variant;MACF1|p.T4896Lfs*29|1|0.27|ENSG00000127603|chr1:39387507-39387507|A/-|frameshift_variant;nc|ENSG00000127603|Q9UPN3-2|MACF1;nc|ENSG00000127603|Q9UPN3-3|MACF1;nc|ENSG00000127603|Q9UPN3-4|MACF1;nc|ENSG00000127603|Q9UPN3-5|MACF1;nc|ENSG00000127603|Q9UPN3|MACF1	79.71258880314673	0.09879134589249085	5				NaN	NaN	0	NaN	2032	3083	5113
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5118	19.096	NaN	2333.1	30	0	310.13	0.106	+			36346	SESSPPKAM	9	51	467.2207613952817	932.4269698573635	2	467.220947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SESSPPKAM_	ENSG00000050405|ENST00000341247|LIMA1;LIMA1|p.T536Lfs*38|2|0.4|ENSG00000050405|chr12:50177739-50177739|G/-|frameshift_variant;nc|ENSG00000050405|Q9UHB6-2|LIMA1;nc|ENSG00000050405|Q9UHB6-3|LIMA1;nc|ENSG00000050405|Q9UHB6-4|LIMA1;nc|ENSG00000050405|Q9UHB6-5|LIMA1	71.87747018426188	0.13267044672804276	5				NaN	NaN	0	NaN	2033	3083	5113
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5119	19.098	NaN	1230.3	30	0	196.7	0.106	+			48263	VTDGPGNYK	9	46	475.7324497808177	949.4503466284355	2	475.73223876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTDGPGNYK_	ATRN|p.P984Lfs*34|1|0.23|ENSG00000088812|chr20:3584079-3584079|C/-|frameshift_variant;ENSG00000088812|ENST00000262919|ATRN;nc|ENSG00000088812|O75882-2|ATRN;nc|ENSG00000088812|O75882-3|ATRN	47.657333605630114	0.33044192980041115	5				NaN	NaN	0	NaN	2034	3083	5113
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5120	19.099	NaN	699.49	30	0	95.426	0.036	+			50242	WPGVPYWW	8	38	545.760498046875	NaN	0	545.760498046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_WPGVPYWW_	ENSG00000182378|ENST00000381657|PLCXD1	33.49298260027079	1.7418937515398478	5				NaN	NaN	0	NaN	2035	3083	5113
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5135	19.131	NaN	18031	30	0	3494.5	0.214	+			19304	KAGEVFIHK	9	71	514.7982520263809	1027.5819511195616	2	514.79833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAGEVFIHK_	ENSG00000147140|ENST00000276079|NONO;ENST00000486613.6_1_X:70504267-70513876:+|nuORF;ENST00000566277.2_1_16:69791529-69791679:-|nuORF;nc|ENSG00000147140|Q15233-2|NONO	133.9934435666947	0.013297982075521412	5				NaN	NaN	0	NaN	2047	3086	5134
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5136	19.135	NaN	38733	30	0	17724	0.106	+			19305	KAGEVFIHK	9	88	343.53441701775915	1027.5814216534775	3	343.5343933105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KAGEVFIHK_	ENSG00000147140|ENST00000276079|NONO;ENST00000486613.6_1_X:70504267-70513876:+|nuORF;ENST00000566277.2_1_16:69791529-69791679:-|nuORF;nc|ENSG00000147140|Q15233-2|NONO	83.6470233535746	0.08277643980271215	5				NaN	NaN	0	NaN	2048	3086	5134
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5137	19.137	NaN	47232	30	0	17319	0.106	+			46932	VIYEKTIRK	9	64	383.9044916386279	1148.6916455160838	3	384.23858642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VIYEKTIRK_	ENSG00000124429|ENST00000262753|POF1B;nc|ENSG00000124429|Q8WVV4-1|POF1B;nc|ENSG00000124429|Q8WVV4-3|POF1B	34.172542307311794	0.4838870758800184	5				NaN	NaN	0	NaN	2049	3086	5134
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5138	19.138	NaN	774.8	30	0	158.07	0.106			+	-1	AEKMKLMQI	9	37	554.299072265625	NaN	0	554.299072265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_AEKMKLM(Oxidation (M))QI_	REV__ENSG00000204165|ENST00000374251|CXorf65	32.81241826257853	0.3119040447479903	5				NaN	NaN	0	NaN	2050	3086	5134
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5139	19.14	NaN	1669.6	30	0	273.84	0.106	+			5179	ATTHEIMGPK	10	46	542.7766146697722	1083.5386764063444	2	542.7767333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATTHEIMGPK_	ENSG00000073921|ENST00000393346|PICALM;ENST00000528411.1_1_11:85734561-85780352:-|nuORF;nc|ENSG00000073921|Q13492-2|PICALM;nc|ENSG00000073921|Q13492-3|PICALM;nc|ENSG00000073921|Q13492-5|PICALM;PICALM|p.L275Gfs*3|1|0.14|ENSG00000073921|chr11:86003436-86003437|-/TTCC|frameshift_variant	36.446750945000026	0.5818864909973037	5				NaN	NaN	0	NaN	2051	3086	5134
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5140	19.142	NaN	2518.3	30	0	235.06	0.038			+	26013	LSKYNWRSL	9	33	389.5501349784688	NaN	0	389.5499267578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSKYNWRSL_	REV__ENSG00000090402|ENST00000264382|SI;REV__SI|p.G1494Efs*26|1|0.04|ENSG00000090402|chr3:164998599-164998600|-/AGAATTTTGTT|frameshift_variant;REV__SI|p.G1778Efs*10|1|0.29|ENSG00000090402|chr3:164982330-164982330|C/-|frameshift_variant	40.77816245573522	0.2702456086868081	5				NaN	NaN	0	NaN	2052	3086	5134
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5141	19.143	NaN	1204.7	30	0	132.43	0.141			+	33136	RERFARGCQ	9	56	561.7818402396676	NaN	0	561.7819213867188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RERFARGCQ_	REV__ENSG00000083812|ENST00000196482|ZNF324;REV__ENSG00000249471|ENST00000336614|ZNF324B;REV__nc|ENSG00000249471|Q6AW86-2|ZNF324B	51.33545320467046	0.19748963086191895	5				NaN	NaN	0	NaN	2053	3086	5134
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5155	19.174	NaN	2931.1	30	0	928.18	0.214	+			13389	GLDLRLAVQ	9	52	492.7950594786336	983.5755660240673	2	492.79534912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GLDLRLAVQ_	ENSG00000172081|ENST00000357066|MOB3A	56.72105179125745	0.24094814563026265	5				NaN	NaN	0	NaN	2064	3089	5154
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5156	19.178	NaN	1422.9	30	0	294.24	0.106	+			20109	KEKKLTSDL	9	51	531.3133506260343	1060.6121483188685	2	531.314208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEKKLTSDL_	ENSG00000125844|ENST00000377813|RRBP1;nc|ENSG00000125844|Q9P2E9-3|RRBP1	46.45678178249821	0.34452392205506005	5				NaN	NaN	0	NaN	2065	3089	5154
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5157	19.18	NaN	8506.9	30	0	1068.5	0.106			+	38194	SQFEPESLDET	11	69	641.2764266975615	NaN	0	641.2764282226562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SQFEPESLDET_	REV__ENSG00000198198|ENST00000634258|SZT2;REV__nc|ENSG00000198198|Q5T011-5|SZT2;REV__SZT2|p.L1644Ffs*4|1|0.36|ENSG00000198198|chr1:43431727-43431728|-/T|frameshift_variant;REV__SZT2|p.P2844Rfs*9|1|0.34|ENSG00000198198|chr1:43443669-43443669|C/-|frameshift_variant;REV__SZT2|p.R3241Afs*11|1|0.33|ENSG00000198198|chr1:43448401-43448401|G/-|frameshift_variant	65.46538089061403	0.1803543755190073	5				NaN	NaN	0	NaN	2066	3089	5154
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5158	19.181	NaN	1377.4	30	0	188.74	0.106	+			23279	KYLGKNSK	8	46	469.2760783761743	NaN	0	469.27606201171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KYLGKNSK_	ENSG00000134588|ENST00000511190|USP26	29.14955571784316	1.7418937515398478	5				NaN	NaN	0	NaN	2067	3089	5154
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5159	19.183	NaN	831.72	30	0	229.57	0.106	+			2027	AKPHKTTIA	9	29	322.8624341823481	965.5654731472443	3	322.862548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AKPHKTTIA_	ENSG00000119457|ENST00000374228|SLC46A2	17.468008924990375	0.6112419832031292	5				NaN	NaN	0	NaN	2068	3089	5154
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5160	19.185	NaN	1437.5	30	0	385.51	0.036				-1	GAWVKLMKI	9	27	354.5451039144293	NaN	0	354.5450134277344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_GAWVKLM(Oxidation (M))KI_	ENST00000285518.10_1_8:6616554-6616653:+|nuORF	27.882242232435846	0.3367954786602879	5				NaN	NaN	0	NaN	2069	3089	5154
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5161	19.186	NaN	1399.6	30	0	506.89	0.14			+	33839	RRARQQLG	8	23	328.8660437474735	NaN	0	328.8660583496094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RRARQQLG_	REV__ENST00000261867.4_1_15:45814615-45814984:-|nuORF	13.775330524044264	1.7418937515398478	5				NaN	NaN	0	NaN	2070	3089	5154
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5174	19.215	NaN	10709	30	0	1646.8	0.214	+			16451	HESRQITQV	9	71	549.28836922241	1096.5621855116199	2	549.2890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HESRQITQV_	ENSG00000104695|ENST00000221138|PPP2CB;ENSG00000113575|ENST00000481195|PPP2CA;ENSG00000119414|ENST00000373547|PPP6C;ENSG00000149923|ENST00000279387|PPP4C;ENST00000566749.5_1_16:30094185-30096380:+|nuORF;ENST00000567040.5_1_16:30087698-30094972:+|nuORF;nc|ENSG00000113575|P67775-2|PPP2CA;nc|ENSG00000119414|O00743-2|PPP6C;nc|ENSG00000119414|O00743-3|PPP6C	129.42129120953632	0.01549634589885217	5				NaN	NaN	0	NaN	2080	3092	5173
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5175	19.218	NaN	1377.8	30	0	179.89	0.106			+	22830	KVGKLTDIT	9	53	487.797623660031	NaN	0	487.7975769042969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVGKLTDIT_	REV__ENSG00000163975|ENST00000296350|MELTF;REV__MFI2|p.V627Cfs*29|1|0.15|ENSG00000163975|chr3:197006608-197006609|-/A|frameshift_variant;REV__MFI2|p.Y365Tfs*54|2|0.47|ENSG00000163975|chr3:197015506-197015506|G/-|frameshift_variant;REV__nc|ENSG00000163975|P08582-2|MELTF	35.61828744233558	0.29773779453147337	5				NaN	NaN	0	NaN	2081	3092	5173
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5176	19.22	NaN	4277.2	30	0	1218.7	0.106	+			45164	TVMDKTRAL	9	51	525.7841398556043	1049.5537267780085	2	525.7844848632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_TVM(Oxidation (M))DKTRAL_	CARD17-CASP1|1|fusion;CARD17-CASP1|2|fusion;CASP1|p.N205Ifs*7|1|0.4|ENSG00000137752|chr11:105030343-105030343|T/-|frameshift_variant;ENSG00000137752|ENST00000533400|CASP1;ENSG00000204397|ENST00000673097|CARD16;ENST00000526511.5_1_11:104901858-104905840:-|nuORF;ENST00000527065.1_1_11:104915107-104915377:-|nuORF;nc|ENSG00000137752|P29466-2|CASP1;nc|ENSG00000204397|Q5EG05|CARD16	72.87924865735499	0.12833875048249987	5				NaN	NaN	0	NaN	2082	3092	5173
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5177	19.222	NaN	1310.4	30	0	298.26	0.106			+	-1	KFLPTGCVV	9	47	510.78250097868954	NaN	0	510.7824401855469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_KFLPTGC(Carbamidomethyl (C))VV_	REV__ENSG00000174099|ENST00000308259|MSRB3;REV__nc|ENSG00000174099|Q8IXL7|MSRB3	44.116797842482775	0.2472372736944149	5				NaN	NaN	0	NaN	2083	3092	5173
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5178	19.224	NaN	752.46	30	0	94.278	0.106	+			49222	VVNDHDNDAN	10	35	556.7343661965805	NaN	0	556.734130859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVNDHDNDAN_	ENSG00000168813|ENST00000355898|ZNF507;nc|ENSG00000168813|Q8TCN5-2|ZNF507;ZNF507|p.H394Mfs*4|1|0.47|ENSG00000168813|chr19:32354001-32354001|A/-|frameshift_variant;ZNF507|p.L875Sfs*7|1|0.15|ENSG00000168813|chr19:32382841-32382842|-/T|frameshift_variant	28.081489160057373	0.40797012399963245	5				NaN	NaN	0	NaN	2084	3092	5173
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5179	19.226	NaN	908.26	30	0	239.04	0.036			+	47299	VNNRKQVQV	9	38	542.8146362304688	NaN	0	542.8146362304688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VNNRKQVQV_	REV__ENST00000477096.1_1_1:71530734-71530788:-|nuORF	39.252832667884924	0.27938773122138094	5				NaN	NaN	0	NaN	2085	3092	5173
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5180	19.226	NaN	2794.5	30	0	492.94	0.143				-1	EYSKQMQRF	9	49	616.7896685315394	1231.5647841298787	2	616.7896728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_EYSKQM(Oxidation (M))QRF_	ENSG00000116478|ENST00000373548|HDAC1;ENSG00000196591|ENST00000519065|HDAC2;ENST00000463172.5_1_1:32757770-32792715:+|nuORF;ENST00000481281.5_1_1:32757770-32793222:+|nuORF;nc|ENSG00000196591|Q92769-3|HDAC2	37.15910966729921	0.4535818937225704	5				NaN	NaN	0	NaN	2086	3092	5173
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5194	19.257	NaN	35468	30	0	14546	0.214			+	24708	LHGSSRSW	8	79	465.2330467449926	928.4515405567852	2	465.2327575683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LHGSSRSW_	REV__ENST00000578411.1_1_17:28120861-28257182:-|nuORF;REV__ENST00000579040.5_1_17:28030063-28257182:-|nuORF;REV__ENST00000590153.1_1_17:28252476-28257245:-|nuORF	31.954861631926434	0.7126016770032289	5				NaN	NaN	0	NaN	2097	3095	5193
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5195	19.261	NaN	4378	30	0	1249.3	0.106	+			42838	TEEERRAEL	9	66	566.7830681963238	1131.5515834594476	2	566.78369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEEERRAEL_	ENSG00000140259|ENST00000267812|MFAP1;ENST00000484386.1_1_15:44097294-44102132:-|nuORF	88.17693792209575	0.07000514020414955	5				NaN	NaN	0	NaN	2098	3095	5193
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5196	19.263	NaN	1923.2	30	0	255	0.106	+			8096	DYAVGLSRM	9	64	514.2479145397422	1026.4812761462842	2	514.248291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_DYAVGLSRM(Oxidation (M))_	ALDH7A1|p.E507Gfs*5|1|0.1|ENSG00000164904|chr5:126546371-126546372|-/T|frameshift_variant;ENSG00000164904|ENST00000409134|ALDH7A1;nc|ENSG00000164904|P49419-2|ALDH7A1;nc|ENSG00000164904|P49419-4|ALDH7A1	60.97194046774394	0.20551255781574032	5				NaN	NaN	0	NaN	2099	3095	5193
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5197	19.265	NaN	18293	30	0	11853	0.106			+	17735	IEPLYDILA	9	44	349.5306781781488	1045.5702051346464	3	349.5310363769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IEPLYDILA_	REV__PPP4R4|p.H456Y|1|0.15|ENSG00000119698|chr14:94245608-94245608|C/T|missense_variant	25.57405402267927	0.5642445186134241	5				NaN	NaN	0	NaN	2100	3095	5193
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5198	19.266	NaN	1261.4	30	0	199.91	0.033			+	13598	GLVPAHTAK	9	40	447.2637256203262	892.5128983074525	2	447.2637023925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GLVPAHTAK_	REV__ENST00000484724.5_1_3:125872139-125877285:-|nuORF;REV__ENST00000493803.5_1_3:125872139-125879775:-|nuORF	33.51558372728122	0.4900267029546261	5				NaN	NaN	0	NaN	2101	3095	5193
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5214	19.3	NaN	8059.5	30	0	3008.7	0.214	+			3001	ASFDKAKLK	9	65	504.2975311917768	1006.5805094503536	2	504.2976989746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASFDKAKLK_	ENSG00000034510|ENST00000233143|TMSB10	134.7655990226056	0.012935733000282069	5				NaN	NaN	0	NaN	2114	3098	5213
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5215	19.303	NaN	1767.2	30	0	535.52	0.106	+			2313	AMKGRLAN	8	45	430.7418518066406	NaN	0	430.7418518066406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AMKGRLAN_	ENSG00000103319|ENST00000263026|EEF2K	33.51558372728122	1.7418937515398478	5				NaN	NaN	0	NaN	2115	3098	5213
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5216	19.305	NaN	4595	30	0	885.13	0.106				-1	GSLDGFMRG	9	55	478.2185900890426	954.4226272448852	2	479.244384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_GSLDGFM(Oxidation (M))RG_	ENSG00000105127|ENST00000269701|AKAP8;ENST00000537303.5_1_19:15472501-15484105:-|nuORF	31.954861631926434	0.5046124803899898	5				NaN	NaN	0	NaN	2116	3098	5213
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5217	19.307	NaN	1074.1	30	0	108.64	0.106	+			11690	FRGRKQARRVG	11	49	444.2686767578125	NaN	0	444.2686767578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FRGRKQARRVG_	nc|ENSG00000215866|Q8N9X3|LINC01356	24.231819034082204	0.456735970842152	5				NaN	NaN	0	NaN	2117	3098	5213
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5218	19.309	NaN	1794.8	30	0	453.9	0.106				-1	MNIWGQIWP	9	41	580.7803205899803	1159.5460882467605	2	580.7807006835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_M(Oxidation (M))NIWGQIWP_	CRISPLD1|p.A199S|1|0.35|ENSG00000121005|chr8:75014071-75014071|G/T|missense_variant;CRISPLD1|p.H362Efs*30|1|0.04|ENSG00000121005|chr8:75017406-75017407|-/GAGGA|frameshift_variant;ENSG00000121005|ENST00000262207|CRISPLD1	17.364965105453717	0.6112419832031293	5				NaN	NaN	0	NaN	2118	3098	5213
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5219	19.311	NaN	1954.5	30	0	319.15	0.034	+			35811	SEAPPTNQA	9	47	457.71396157102333	913.4133702088467	2	457.71435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SEAPPTNQA_	ENSG00000179222|ENST00000326587|MAGED1;ENST00000485420.5_1_X:51636757-51640983:+|nuORF;ENST00000494718.5_1_X:51637400-51640272:+|nuORF;MAGED1|p.P628Rfs*18|1|0.09|ENSG00000179222|chrX:51900215-51900215|C/-|frameshift_variant;nc|ENSG00000179222|Q9Y5V3-2|MAGED1	101.25262130126117	0.03792372629710479	5				NaN	NaN	0	NaN	2119	3098	5213
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5220	19.311	NaN	953.88	30	0	96.287	0.141	+			11200	FHLANKTKL	9	45	536.3177094921609	NaN	0	536.318115234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FHLANKTKL_	tr|U7T5C6|U7T5C6_FUSNUBacterialvirulenceproteinVirB8domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00016PE=4SV=1	24.519189625965996	0.35377483217337163	5				NaN	NaN	0	NaN	2120	3098	5213
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5233	19.34	NaN	39987	30	0	8246.1	0.214	+			4141	ATEQPLTAK	9	78	479.7636507060918	957.5127484789837	2	479.763916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATEQPLTAK_	ENSG00000120725|ENST00000394817|SIL1	131.61620852596164	0.014413238321579053	5				NaN	NaN	0	NaN	2130	3101	5232
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5234	19.344	NaN	6296.6	30	0	940.6	0.106	+			22709	KVAPAPAVVK	10	64	490.3183316717305	978.622110410261	2	490.3183288574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVAPAPAVVK_	ENSG00000148303|ENST00000323345|RPL7A;ENST00000424041.1_1_20:36073469-36073910:-|nuORF;ENST00000463740.5_1_9:136215098-136217195:+|nuORF	90.36981228632155	0.12895663264417576	5				NaN	NaN	0	NaN	2131	3101	5232
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5235	19.346	NaN	3079	30	0	568.59	0.106	+			26403	LTEIGERGANL	11	49	391.54688891453816	1171.6188373438144	3	391.5467529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LTEIGERGANL_	ABCC5|p.G855Afs*14|1|0.45|ENSG00000114770|chr3:183953189-183953189|C/-|frameshift_variant;ABCC5|p.L1090Cfs*26|1|0.47|ENSG00000114770|chr3:183947469-183947469|A/-|frameshift_variant;ABCC5|p.L1090Vfs*62|2|0.19|ENSG00000114770|chr3:183947469-183947470|AA/-|frameshift_variant;ENSG00000114770|ENST00000334444|ABCC5;ENST00000437205.5_1_3:183639090-183689734:-|nuORF;nc|ENSG00000114770|O15440-5|ABCC5	32.81241826257853	0.645615689454792	5				NaN	NaN	0	NaN	2132	3101	5232
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5236	19.348	NaN	4461.9	30	0	1237.1	0.106	+			22332	KTFTVQTTK	9	67	527.3005179489662	1052.5864829647323	2	527.3008422851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTFTVQTTK_	ENST00000395002.6_1_4:89744147-89744438:-|nuORF	104.42354056486148	0.0346881550498418	5				NaN	NaN	0	NaN	2133	3101	5232
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5237	19.349	NaN	1650.5	30	0	403.19	0.035	+			21790	KQVIFMPQ	8	53	495.7763120404185	NaN	0	495.7769470214844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KQVIFMPQ_	CDH10|p.F102Lfs*36|1|0.41|ENSG00000040731|chr5:24537600-24537600|A/-|frameshift_variant;CDH10|p.T108Qfs*30|1|0.4|ENSG00000040731|chr5:24537584-24537584|T/-|frameshift_variant	45.9519527083369	1.7418937515398478	5				NaN	NaN	0	NaN	2134	3101	5232
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5251	19.379	NaN	23617	30	0	5839.4	0.214	+			22461	KTLNDSLKK	9	89	523.8135678399345	1045.612582746669	2	523.814208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTLNDSLKK_	CCDC146|p.E671Qfs*21|1|0.06|ENSG00000135205|chr7:77282647-77282648|-/CAGAGGCAGA|frameshift_variant;CCDC146|p.F933Lfs*10|1|0.43|ENSG00000135205|chr7:77294794-77294794|T/-|frameshift_variant;ENSG00000135205|ENST00000285871|CCDC146;nc|ENSG00000135205|Q8IYE0-2|CCDC146	148.98678547993487	0.0071052929883181565	5				NaN	NaN	0	NaN	2145	3104	5250
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5252	19.383	NaN	9336.5	30	0	3169.5	0.106	+			34581	RVMKALVNR	9	80	543.8315198382512	1085.6484867433023	2	543.8321533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RVMKALVNR_	ENSG00000149136|ENST00000278412|SSRP1;ENST00000293880.9_1_11:57098199-57100416:-|nuORF	154.1183686248401	0.005909203230691971	5				NaN	NaN	0	NaN	2146	3104	5250
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5253	19.385	NaN	16172	30	0	3999.6	0.106	+			5415	ATYHGSFSTK	10	68	549.7639670066503	1097.5133810801005	2	549.764404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATYHGSFSTK_	ENSG00000163359|ENST00000295550|COL6A3;ENST00000491769.1_1_2:238233419-238250825:-|nuORF;ENST00000493608.1_1_2:238242084-238243404:-|nuORF;nc|ENSG00000163359|P12111-2|COL6A3;nc|ENSG00000163359|P12111-4|COL6A3	115.23196543181992	0.034063879665207575	5				NaN	NaN	0	NaN	2147	3104	5250
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5254	19.387	NaN	2530.9	30	0	308.19	0.106			+	8431	EAQVKRTL	8	46	472.7798481861126	943.5451434390252	2	472.7794494628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EAQVKRTL_	REV__CLIP1|p.E992Lfs*32|1|0.2|ENSG00000130779|chr12:122328315-122328321|TGCTTCT/-|frameshift_variant;REV__CLIP1|p.M1151Wfs*8|1|0.31|ENSG00000130779|chr12:122316771-122316771|T/-|frameshift_variant;REV__ENSG00000130779|ENST00000620786|CLIP1;REV__nc|ENSG00000130779|P30622-1|CLIP1;REV__nc|ENSG00000130779|P30622-2|CLIP1	82.7504851949679	0.3006553482314138	5				NaN	NaN	0	NaN	2148	3104	5250
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5255	19.388	NaN	9104.5	30	0	1209.3	0.106	+			34582	RVMKALVNR	9	68	362.89047991397877	1085.6496103421364	3	362.89019775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RVMKALVNR_	ENSG00000149136|ENST00000278412|SSRP1;ENST00000293880.9_1_11:57098199-57100416:-|nuORF	78.26377905018397	0.10505600812668463	5				NaN	NaN	0	NaN	2149	3104	5250
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5256	19.39	NaN	4829.6	30	0	769.82	0.036	+			16491	HETSKMKVL	9	62	536.7937991513779	1071.5730453695558	2	536.79443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HETSKMKVL_	ENSG00000067445|ENST00000173898|TRO;ENSG00000179222|ENST00000326587|MAGED1;ENST00000475183.1_1_X:54953428-54957230:+|nuORF;ENST00000492706.5_1_X:54953428-54957450:+|nuORF;ENST00000494718.5_1_X:51643260-51645023:+|nuORF;nc|ENSG00000067445|Q12816-2|TRO;nc|ENSG00000067445|Q12816-3|TRO;nc|ENSG00000067445|Q12816-4|TRO;nc|ENSG00000067445|Q12816-5|TRO;nc|ENSG00000179222|Q9Y5V3-2|MAGED1;TRO|p.S1034Rfs*10|1|0.07|ENSG00000067445|chrX:54929826-54929826|C/-|frameshift_variant	93.1432384553994	0.056003526918089595	5				NaN	NaN	0	NaN	2150	3104	5250
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5257	19.391	NaN	4211.6	30	0	864.64	0.139	+			5013	ATSAVTVTR	9	54	453.2556069474886	904.4966609617773	2	453.2559509277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATSAVTVTR_	ENSG00000123444|ENST00000430070|KBTBD4;nc|ENSG00000123444|Q9NVX7-1|KBTBD4;nc|ENSG00000123444|Q9NVX7-3|KBTBD4	146.78539889680295	0.007618400906539062	5				NaN	NaN	0	NaN	2151	3104	5250
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5275	19.43	NaN	18746	30	0	3281.1	0.214	+			28428	NEVEQRHTL	9	74	563.2857175786244	1124.5568822240486	2	563.2861938476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NEVEQRHTL_	ENSG00000047410|ENST00000367478|TPR;TPR|p.E1141Dfs*29|1|0.08|ENSG00000047410|chr1:186344085-186344086|-/CAGGTAAA|frameshift_variant;TPR|p.E856D|1|0.2|ENSG00000047410|chr1:186351372-186351372|T/G|missense_variant;TPR|p.P2083Qfs*3|1|0.31|ENSG00000047410|chr1:186323735-186323735|G/-|frameshift_variant;TPR|p.T2133Lfs*63|1|0.03|ENSG00000047410|chr1:186322382-186322383|-/GTACTAATAAG|frameshift_variant;TPR|p.V1142Efs*26|1|0.08|ENSG00000047410|chr1:186344083-186344084|-/TT|frameshift_variant	158.07458414430337	0.004987072822166904	5				NaN	NaN	0	NaN	2166	3107	5274
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5276	19.434	NaN	13152	30	0	2187.7	0.106	+			28079	NAESGRGQVM	10	70	524.7454068743757	1047.4762608155513	2	524.74609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NAESGRGQVM_	ENSG00000008517|ENST00000525643|IL32;nc|ENSG00000008517|P24001-3|IL32;nc|ENSG00000008517|P24001-4|IL32;nc|ENSG00000008517|P24001|IL32	112.10723106719422	0.0417416748461292	5				NaN	NaN	0	NaN	2167	3107	5274
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5277	19.436	NaN	12841	30	0	2733.1	0.106			+	-1	RSRALFCCL	9	48	375.8596372161517	1124.5570822486552	3	375.859619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_RSRALFC(Carbamidomethyl (C))CL_	REV__ENST00000286614.10_1_8:89053580-89053622:-|nuORF	26.69291269510374	0.5537881896960711	5				NaN	NaN	0	NaN	2168	3107	5274
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5278	19.437	NaN	2172.5	30	0	615.45	0.106			+	3930	ATASPLPK	8	37	392.73184168739994	783.4491304415999	2	392.7317810058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATASPLPK_	REV__EIF4G3|p.F1258Lfs*2|1|0.43|ENSG00000075151|chr1:20840975-20840975|A/-|frameshift_variant;REV__ENSG00000075151|ENST00000602326|EIF4G3;REV__nc|ENSG00000075151|O43432-3|EIF4G3;REV__nc|ENSG00000075151|O43432-4|EIF4G3;REV__nc|ENSG00000075151|O43432|EIF4G3	50.0245360154114	0.5941082100236891	5				NaN	NaN	0	NaN	2169	3107	5274
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5279	19.439	NaN	3733.6	30	0	309.16	0.106	+			34961	SAAKSLLNK	9	61	466.28231565460516	930.5500783760103	2	466.2818298339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SAAKSLLNK_	ENST00000474131.5_1_10:75577276-75601951:-|nuORF;ENST00000492020.5_1_10:75597207-75607060:-|nuORF;nc|ENSG00000058404|Q13554-3|CAMK2B;nc|ENSG00000058404|Q13554-4|CAMK2B;nc|ENSG00000058404|Q13554-5|CAMK2B;nc|ENSG00000148660|Q13555-10|CAMK2G;nc|ENSG00000148660|Q13555-2|CAMK2G;nc|ENSG00000148660|Q13555-3|CAMK2G;nc|ENSG00000148660|Q13555-4|CAMK2G;nc|ENSG00000148660|Q13555-7|CAMK2G;nc|ENSG00000148660|Q13555-8|CAMK2G;nc|ENSG00000148660|Q13555-9|CAMK2G;nc|ENSG00000148660|Q13555|CAMK2G	56.43379154798735	0.2433427591689151	5				NaN	NaN	0	NaN	2170	3107	5274
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5280	19.441	NaN	2019.6	30	0	204.47	0.035			+	-1	ESIKRCLP	8	56	501.7737731933594	NaN	0	501.7737731933594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_ESIKRC(Carbamidomethyl (C))LP_	REV__ENSG00000214891|ENST00000617704|TRIM64C	55.50420428727701	1.7418937515398478	5				NaN	NaN	0	NaN	2171	3107	5274
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5281	19.442	NaN	1105.7	30	0	401.71	0.143	+			47166	VLSSGARVLV	10	26	334.209628074044	999.6070548223321	3	334.2095642089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VLSSGARVLV_	ENSG00000083807|ENST00000263093|SLC27A5	16.473147378115264	0.7327422906225664	5				NaN	NaN	0	NaN	2172	3107	5274
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5295	19.473	NaN	20398	30	0	6179.5	0.214	+			48914	VVDNGSGMCK	10	75	505.2251893454947	1008.4358257577894	2	505.2255554199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVDNGSGMCK_	ACTBL2|p.R29Gfs*7|1|0.37|ENSG00000169067|chr5:57482623-57482623|G/-|frameshift_variant;ENSG00000075624|ENST00000646664|ACTB;ENSG00000169067|ENST00000423391|ACTBL2;ENST00000418351.1_1_15:44282253-44282364:-|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000477812.1_1_7:5569027-5569288:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF	117.5257442709337	0.03082425562130952	5				NaN	NaN	0	NaN	2183	3110	5294
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5296	19.476	NaN	4396.7	30	0	482.53	0.106	+			856	AEGTAQQRL	9	59	487.25646495050046	NaN	0	487.2563781738281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEGTAQQRL_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	67.49366992349736	0.1173583512313808	5				NaN	NaN	0	NaN	2184	3110	5294
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5297	19.478	NaN	1972.5	30	0	1359.1	0.106	+			7470	DGALARPAC	9	44	437.2158070039875	872.417061074775	2	437.2156982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DGALARPAC_	ENST00000569796.1_1_16:2281646-2281928:+|nuORF	23.04248740728303	0.5879033540491928	5				NaN	NaN	0	NaN	2185	3110	5294
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5298	19.48	NaN	1208.5	30	0	99.345	0.106			+	22641	KTVRDSVPT	9	53	501.78240966796875	NaN	0	501.78240966796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTVRDSVPT_	REV__CON__P02768-1;REV__ENSG00000163631|ENST00000295897|ALB;REV__nc|ENSG00000163631|P02768-2|ALB;REV__nc|ENSG00000163631|P02768-3|ALB	36.446750945000026	0.29355505452396785	5				NaN	NaN	0	NaN	2186	3110	5294
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5299	19.482	NaN	939.77	30	0	139.28	0.106	+			42522	TAPVIGYI	8	49	417.240234375	NaN	0	417.240234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TAPVIGYI_	ENSG00000167703|ENST00000301335|SLC43A2;ENST00000572135.5_1_17:1488956-1531469:-|nuORF;nc|ENSG00000167703|Q8N370-2|SLC43A2;nc|ENSG00000167703|Q8N370-3|SLC43A2;nc|ENSG00000167703|Q8N370-4|SLC43A2	28.2542754592877	1.7418937515398478	5				NaN	NaN	0	NaN	2187	3110	5294
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5300	19.484	NaN	969.17	30	0	157.24	0.036	+			49399	VVTETLKKH	9	47	527.8160260050674	1053.6174990769348	2	527.775146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VVTETLKKH_	ENSG00000172167|ENST00000305949|MTBP	32.81241826257853	0.4965981579233955	5				NaN	NaN	0	NaN	2188	3110	5294
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5301	19.484	NaN	759.47	30	0	144.75	0.139			+	-1	DPPRTDPA	8	40	455.7164776873121	NaN	0	455.71612548828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))DPPRTDPA_	REV__ENSG00000171729|ENST00000376008|TMEM51	24.20275056022122	1.7418937515398478	5				NaN	NaN	0	NaN	2189	3110	5294
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5315	19.516	NaN	4262.2	30	0	680.28	0.214			+	19640	KDKKGKNPT	9	54	508.2982597501216	1014.5819665670432	2	508.2980041503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KDKKGKNPT_	REV__ENST00000428142.1_1_17:16880427-16880571:-|nuORF	40.77816245573522	0.41113185337114944	5				NaN	NaN	0	NaN	2200	3113	5314
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5316	19.519	NaN	1747.6	30	0	182.83	0.106				-1	AELEHCLK	8	56	500.2500032267389	NaN	0	500.249755859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_AELEHC(Carbamidomethyl (C))LK_	ENSG00000183423|ENST00000594814|LRIT3;LRIT3|p.R245Q|1|0.33|ENSG00000183423|chr4:109867785-109867785|G/A|missense_variant;nc|ENSG00000183423|Q3SXY7-2|LRIT3	53.351449002276354	1.7418937515398478	5				NaN	NaN	0	NaN	2201	3113	5314
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5317	19.521	NaN	1711.9	30	0	394.67	0.106	+			4697	ATLTGGPAR	9	41	422.2374781878894	NaN	0	422.23724365234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATLTGGPAR_	ENSG00000055609|ENST00000262189|KMT2C;ENSG00000167548|ENST00000301067|KMT2D;KMT2C|p.I4868Lfs*37|1|0.28|ENSG00000055609|chr7:152138837-152138837|T/-|frameshift_variant;nc|ENSG00000055609|Q8NEZ4-2|KMT2C;nc|ENSG00000055609|Q8NEZ4-3|KMT2C;nc|ENSG00000167548|O14686-3|KMT2D	52.936696900407355	0.1864545979552969	5				NaN	NaN	0	NaN	2202	3113	5314
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5318	19.523	NaN	1227.4	30	0	260.85	0.106	+			26177	LSRGSSPV	8	39	401.7244873046875	NaN	0	401.7244873046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSRGSSPV_	DACT1|p.P520Rfs*60|3|0.21|ENSG00000165617|chr14:58646177-58646177|C/-|frameshift_variant	24.20275056022122	1.7418937515398478	5				NaN	NaN	0	NaN	2203	3113	5314
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5319	19.525	NaN	3583.2	30	0	589.41	0.106	+			44976	TVCKLSVSK	9	63	511.28864977467657	1020.5627466161532	2	511.7903747558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_TVC(Carbamidomethyl (C))KLSVSK_	ENSG00000127603|ENST00000564288|MACF1;nc|ENSG00000127603|O94854|MACF1;nc|ENSG00000127603|Q9UPN3-2|MACF1;nc|ENSG00000127603|Q9UPN3-3|MACF1;nc|ENSG00000127603|Q9UPN3-4|MACF1;nc|ENSG00000127603|Q9UPN3-5|MACF1;nc|ENSG00000127603|Q9UPN3|MACF1	99.01295224348159	0.040209060045561164	5				NaN	NaN	0	NaN	2204	3113	5314
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5320	19.527	NaN	985.79	30	0	206.95	0.034	+			1431	AEYGPQGRA	9	35	474.73022555215067	947.4458981711014	2	474.730224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEYGPQGRA_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	40.77816245573522	0.41113185337114944	5				NaN	NaN	0	NaN	2205	3113	5314
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5321	19.527	NaN	623.23	30	0	87.04	0.14	+			954	AEKACGVCPL	10	39	495.74054516689944	NaN	0	496.2235412597656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AEKACGVCPL_	CON__Q29RQ1	35.61828744233558	0.3832230071539346	5				NaN	NaN	0	NaN	2206	3113	5314
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5335	19.559	NaN	9340.4	30	0	2577.7	0.214	+			40418	STVGTSNLK	9	63	453.74803151497616	905.4815100967523	2	453.7479248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STVGTSNLK_	ENSG00000135111|ENST00000349155|TBX3;nc|ENSG00000135111|O15119-3|TBX3;nc|ENSG00000135111|O15119|TBX3;TBX3|p.K714Rfs*15|1|0.12|ENSG00000135111|chr12:114671931-114671932|TT/-|frameshift_variant;TBX3|p.S443Afs*194|1|1.0|ENSG00000135111|chr12:114674609-114674610|-/ATGGTGGCGGGGCT|frameshift_variant	163.1509380574825	0.003936019289634439	5				NaN	NaN	0	NaN	2217	3116	5334
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5336	19.562	NaN	8439.8	30	0	1053.7	0.106	+			5768	AVGNIKVTK	9	67	465.2927025514716	928.5708521697433	2	465.292236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVGNIKVTK_	DDX18|p.K110Efs*11|1|0.42|ENSG00000088205|chr2:117817678-117817679|-/A|frameshift_variant;ENSG00000088205|ENST00000263239|DDX18	109.47833844074708	0.029530294723441826	5				NaN	NaN	0	NaN	2218	3116	5334
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5337	19.564	NaN	2802.5	30	0	801.25	0.106			+	-1	EACAIGAVCQ	10	65	511.22690484426937	1020.4392567553388	2	510.8138732910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_EAC(Carbamidomethyl (C))AIGAVCQ_	REV__ENSG00000108424|ENST00000290158|KPNB1	60.11826168202944	0.36476464221954025	5				NaN	NaN	0	NaN	2219	3116	5334
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5338	19.566	NaN	1367.6	30	0	223.22	0.035	+			6922	CMKYLYTL	8	41	517.7547538010847	NaN	0	517.7549438476562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_CMKYLYTL_	ENST00000268607.9_1_16:87437976-87438060:+|nuORF	33.51558372728122	1.7418937515398478	5				NaN	NaN	0	NaN	2220	3116	5334
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5353	19.598	NaN	19009	30	0	2467.9	0.214				-1	 	0	67	503.22927198204945	1004.4439910308989	2	503.2296142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2232	3119	5352
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5354	19.601	NaN	8042.7	30	0	3383.3	0.106			+	-1	GTARPWGAKRM	11	55	416.2214658160559	NaN	0	415.8872985839844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_GTARPWGAKRM(Oxidation (M))_	REV__ENST00000367097.7_1_6:158735073-158735217:+|nuORF	34.08650109265054	0.41350691770670583	5				NaN	NaN	0	NaN	2233	3119	5352
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5355	19.603	NaN	2002.6	30	0	534.22	0.106	+			5561	AVAPNQNLK	9	49	477.77167604871664	NaN	0	477.7718200683594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVAPNQNLK_	COL6A2|p.P584Lfs*12|1|0.46|ENSG00000142173|chr21:46124896-46124896|C/-|frameshift_variant;ENSG00000142173|ENST00000300527|COL6A2;nc|ENSG00000142173|P12110-2|COL6A2;nc|ENSG00000142173|P12110-3|COL6A2	31.954861631926434	0.3162336699109506	5				NaN	NaN	0	NaN	2234	3119	5352
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5356	19.605	NaN	2999.3	30	0	334.5	0.106			+	455	AAVKAFLAQ	9	60	459.77259705467776	NaN	0	459.76849365234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AAVKAFLAQ_	REV__ENSG00000119042|ENST00000417098|SATB2;REV__ENSG00000182568|ENST00000338745|SATB1;REV__ENST00000467628.1_1_3:18393447-18419817:-|nuORF;REV__nc|ENSG00000119042|Q9UPW6-2|SATB2;REV__nc|ENSG00000182568|Q01826-2|SATB1;REV__SATB1|p.P626Hfs*81|1|0.31|ENSG00000182568|chr3:18349585-18349585|G/-|frameshift_variant	65.80317337860623	0.12456833308499304	5				NaN	NaN	0	NaN	2235	3119	5352
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5357	19.607	NaN	5598.2	30	0	723.69	0.106	+			27873	MTKCDVTGGK	10	72	520.2489666214339	1038.4833803096676	2	520.7509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MTKCDVTGGK_	ITGB8|p.K437T|1|0.33|ENSG00000105855|chr7:20401749-20401749|A/C|missense_variant	77.31757898189308	0.2175361111083648	5				NaN	NaN	0	NaN	2236	3119	5352
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5358	19.608	NaN	5597.2	30	0	1155.6	0.037	+			39522	STFRESFKK	9	51	377.2050044493069	NaN	0	377.2047424316406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STFRESFKK_	ENSG00000067066|ENST00000340126|SP100;nc|ENSG00000067066|P23497-2|SP100;nc|ENSG00000067066|P23497-3|SP100;nc|ENSG00000067066|P23497-5|SP100;nc|ENSG00000067066|P23497-6|SP100;nc|ENSG00000067066|P23497-7|SP100;nc|ENSG00000067066|P23497|SP100	41.42661286455405	0.26577678759562784	5				NaN	NaN	0	NaN	2237	3119	5352
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5359	19.609	NaN	1008.7	30	0	177.05	0.141			+	31949	QQRGLDAQTL	10	44	565.3037413231691	NaN	0	565.3027954101562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QQRGLDAQTL_	REV__ENSG00000153531|ENST00000612156|ADPRHL1	43.650786325866115	0.3457431322078509	5				NaN	NaN	0	NaN	2238	3119	5352
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5373	19.641	NaN	4909.9	30	0	1083.7	0.214			+	45725	VAAWLPWL	8	55	478.27315851726416	954.5317641013283	2	478.2730407714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VAAWLPWL_	REV__ENSG00000258429|ENST00000288022|PDF	67.3271909547111	0.42924334279516513	5				NaN	NaN	0	NaN	2249	3122	5372
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5374	19.644	NaN	2279.6	30	0	434.25	0.106	+			1696	AGTTGPCLCAQ	11	54	511.22690484426937	1020.4392567553388	2	511.2269592285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AGTTGPCLCAQ_	AluSc8_dup7305|chr6:30493012-30493324:+|1.025799963262684|0.0449135051643763|4.51|481.0|23|3|anti-sense	42.86426827375447	0.5187511139693657	5				NaN	NaN	0	NaN	2250	3122	5372
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5375	19.646	NaN	2051	30	0	285.42	0.106	+			27087	MALQETPPQ	9	63	507.75035287073854	1013.4861528082771	2	507.7498779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MALQETPPQ_	ENSG00000159753|ENST00000334583|CARMIL2;nc|ENSG00000159753|Q6F5E8-2|CARMIL2	47.657333605630114	0.33044192980041115	5				NaN	NaN	0	NaN	2251	3122	5372
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5376	19.648	NaN	6608.7	30	0	3387.9	0.106	+			32154	QSPQGRVM	8	52	451.72923241044236	901.4439118876847	2	451.72930908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QSPQGRVM_	ENSG00000169564|ENST00000303577|PCBP1	60.97194046774394	0.49215940876911696	5				NaN	NaN	0	NaN	2252	3122	5372
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5377	19.65	NaN	871.23	30	0	146.44	0.033	+			15577	GVGQLPQSP	9	39	441.73738718328065	NaN	0	441.7379150390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GVGQLPQSP_	ENST00000339560.9_1_19:14048664-14049262:-|nuORF	44.116797842482775	0.2472372736944149	5				NaN	NaN	0	NaN	2253	3122	5372
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5393	19.683	NaN	8187.6	30	0	2587.3	0.214	+			16811	HPDKKIVAY	9	70	535.8033316663851	1069.5921103995702	2	535.803955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HPDKKIVAY_	ATXN10|p.F455Lfs*10|1|0.3|ENSG00000130638|chr22:45843115-45843115|T/-|frameshift_variant;ENSG00000130638|ENST00000252934|ATXN10;nc|ENSG00000130638|Q9UBB4-2|ATXN10	136.26810882979174	0.012230845423532208	5				NaN	NaN	0	NaN	2266	3125	5392
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5394	19.687	NaN	4023.6	30	0	1245.8	0.106			+	19666	KDLSRPVIG	9	62	492.795489133426	NaN	0	492.7955017089844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KDLSRPVIG_	REV__ENST00000509659.5_1_4:88898870-88904045:+|nuORF	69.6276240434122	0.10825701912424071	5				NaN	NaN	0	NaN	2267	3125	5392
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5395	19.689	NaN	13009	30	0	1720.7	0.106	+			16812	HPDKKIVAY	9	78	357.5380033522888	1069.5921806570664	3	357.5377197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HPDKKIVAY_	ATXN10|p.F455Lfs*10|1|0.3|ENSG00000130638|chr22:45843115-45843115|T/-|frameshift_variant;ENSG00000130638|ENST00000252934|ATXN10;nc|ENSG00000130638|Q9UBB4-2|ATXN10	42.396135135203025	0.392153681582562	5				NaN	NaN	0	NaN	2268	3125	5392
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5396	19.69	NaN	1309.3	30	0	256.65	0.106	+			30112	PRNCYHSATL	10	62	581.2776489257812	NaN	0	581.2776489257812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PRNCYHSATL_	ENSG00000242950|ENST00000603053|ERVW-1	44.377184641726394	0.34115073642966565	5				NaN	NaN	0	NaN	2269	3125	5392
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5397	19.692	NaN	4984.7	30	0	2073.8	0.106			+	24650	LGTLLLHE	8	51	448.2644256015683	NaN	0	448.26409912109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LGTLLLHE_	REV__ENSG00000196666|ENST00000538490|FAM180B	28.2542754592877	1.7418937515398478	5				NaN	NaN	0	NaN	2270	3125	5392
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5398	19.694	NaN	661.11	30	0	118.19	0.106	+			19531	KAVVCLAFN	9	34	482.768798828125	NaN	0	482.768798828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KAVVCLAFN_	ENSG00000167965|ENST00000569417|MLST8;ENST00000301724.14_1_16:2258611-2258875:+|nuORF;ENST00000563067.5_1_16:2258286-2258875:+|nuORF;ENST00000568542.5_1_16:2256445-2258875:+|nuORF;nc|ENSG00000167965|Q9BVC4-3|MLST8;nc|ENSG00000167965|Q9BVC4-5|MLST8	24.20275056022122	0.35506675290109213	5				NaN	NaN	0	NaN	2271	3125	5392
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5399	19.696	NaN	795.48	30	0	89.879	0.036	+			33602	RLPLLPASR	9	34	341.5530090332031	NaN	0	341.5530090332031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RLPLLPASR_	ENST00000566264.1_1_16:1583702-1584173:+|nuORF	17.468008924990375	0.37786057458515737	5				NaN	NaN	0	NaN	2272	3125	5392
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5413	19.725	NaN	9306	30	0	1259.4	0.214	+			42921	TEIEKARAV	9	75	508.79057012927075	1015.5665873253415	2	508.79034423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEIEKARAV_	ENSG00000148843|ENST00000369797|PDCD11	114.8945686534367	0.024290463251177924	5				NaN	NaN	0	NaN	2283	3128	5412
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5414	19.729	NaN	4173.9	30	0	859.95	0.106			+	40148	STQLGRHILL	10	44	379.89609809889026	1136.6664648968708	3	379.8958740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STQLGRHILL_	REV__ENST00000378641.7_2_20:8113010-8113124:+|nuORF	37.81151784470057	0.569310847604193	5				NaN	NaN	0	NaN	2284	3128	5412
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5415	19.73	NaN	1606.3	30	0	298.52	0.106	+			15914	HAASNPPAQY	10	49	528.2487924321568	1054.4830319311136	2	528.2490844726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HAASNPPAQY_	CEACAM6|p.S270T|1|0.25|ENSG00000086548|chr19:41762073-41762073|T/A|missense_variant;ENSG00000086548|ENST00000199764|CEACAM6;ENSG00000105388|ENST00000221992|CEACAM5;ENSG00000105388|ENST00000221992|CEACAM5;nc|ENSG00000105388|P06731-2|CEACAM5;nc|ENSG00000105388|P06731-2|CEACAM5	58.22992032128504	0.38193887838457763	5				NaN	NaN	0	NaN	2285	3128	5412
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5416	19.732	NaN	3936.5	30	0	2083.1	0.106	+			38890	SSPASKTTL	9	49	446.24276182096736	890.4709707087347	2	446.2420349121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSPASKTTL_	ENSG00000162437|ENST00000294428|RAVER2;ENST00000418058.1_1_1:65270770-65280577:+|nuORF;nc|ENSG00000162437|Q9HCJ3-2|RAVER2	45.02220120713402	0.3613509778819777	5				NaN	NaN	0	NaN	2286	3128	5412
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5417	19.734	NaN	1031.5	30	0	153.46	0.106	+			44359	TSIQPGAPK	9	43	449.75346742350143	NaN	0	449.7532653808594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TSIQPGAPK_	ENSG00000130669|ENST00000360442|PAK4;nc|ENSG00000130669|O96013-2|PAK4;nc|ENSG00000130669|O96013-3|PAK4;nc|ENSG00000130669|O96013-4|PAK4;PAK4|p.Q189Sfs*180|4|0.41|ENSG00000130669|chr19:39173273-39173273|C/-|frameshift_variant	52.936696900407355	0.1864545979552969	5				NaN	NaN	0	NaN	2287	3128	5412
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5418	19.736	NaN	1510.4	30	0	379.66	0.106			+	35191	SAISNVCSK	9	38	454.7285912625494	NaN	0	454.7284851074219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SAISNVCSK_	REV__ENSG00000259823|ENST00000590317|LYPD8	51.52775601994872	0.19616436856719055	5				NaN	NaN	0	NaN	2288	3128	5412
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5419	19.738	NaN	1621.8	30	0	240.31	0.035	+			39074	SSSRGPLPVK	10	51	514.2985303385586	1026.5825077439172	2	514.2987060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSSRGPLPVK_	ENSG00000147274|ENST00000320676|RBMX;ENSG00000213516|ENST00000652648|RBMXL1;nc|ENSG00000147274|P38159-2|RBMX	27.047317107675042	0.6589519614906109	5				NaN	NaN	0	NaN	2289	3128	5412
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5432	19.765	NaN	4354.5	30	0	1414.5	0.214	+			3002	ASFDKAKLK	9	61	504.2975311917768	1006.5805094503536	2	504.29833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASFDKAKLK_	ENSG00000034510|ENST00000233143|TMSB10	80.45461616416974	0.09558281504443908	5				NaN	NaN	0	NaN	2299	3131	5431
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5433	19.769	NaN	2811.8	30	0	422.18	0.106	+			19774	KEAETRAEF	9	66	540.7699389255527	1079.5253249179052	2	540.7713012695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEAETRAEF_	CON__Q3SX28;ENSG00000140416|ENST00000403994|TPM1;ENSG00000143549|ENST00000651641|TPM3;ENSG00000167460|ENST00000643579|TPM4;ENSG00000198467|ENST00000645482|TPM2;ENST00000368528.3_1_3:27674554-27675208:+|nuORF;ENST00000397772.2_1_20:32500135-32500381:-|nuORF;ENST00000469717.5_1_1:154130117-154143232:-|nuORF;ENST00000520239.1_1_8:70042334-70042577:+|nuORF;ENST00000558264.5_1_15:63353458-63363368:+|nuORF;ENST00000559108.1_1_15:63354467-63358183:+|nuORF;nc|ENSG00000140416|P09493-10|TPM1;nc|ENSG00000140416|P09493-2|TPM1;nc|ENSG00000140416|P09493-3|TPM1;nc|ENSG00000140416|P09493-4|TPM1;nc|ENSG00000140416|P09493-5|TPM1;nc|ENSG00000140416|P09493-6|TPM1;nc|ENSG00000140416|P09493-7|TPM1;nc|ENSG00000140416|P09493-8|TPM1;nc|ENSG00000140416|P09493-9|TPM1;nc|ENSG00000143549|P06753-2|TPM3;nc|ENSG00000143549|P06753-3|TPM3;nc|ENSG00000143549|P06753-4|TPM3;nc|ENSG00000143549|P06753-5|TPM3;nc|ENSG00000143549|P06753-6|TPM3;nc|ENSG00000143549|P06753-7|TPM3;nc|ENSG00000167460|P67936-2|TPM4;nc|ENSG00000198467|P07951-2|TPM2;nc|ENSG00000198467|P07951-3|TPM2;TPM3|p.A243T|1|0.29|ENSG00000143549|chr1:154170448-154170448|C/T|missense_variant	98.58198989935565	0.04066992115528678	5				NaN	NaN	0	NaN	2300	3131	5431
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5434	19.771	NaN	10464	30	0	3123.7	0.106			+	2353	AMVQGGAIQ	9	60	437.72639244046627	873.4382319477326	2	437.72637939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AMVQGGAIQ_	REV__ENSG00000120280|ENST00000378962|TASL	87.75429964447693	0.0711966946989736	5				NaN	NaN	0	NaN	2301	3131	5431
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5435	19.772	NaN	962.93	30	0	163.5	0.106	+			1485	AFPAITFPG	9	47	460.7468811369253	NaN	0	460.74688720703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AFPAITFPG_	ELN|p.V85I|1|0.34|ENSG00000049540|chr7:74042634-74042634|G/A|missense_variant	24.20275056022122	0.35506675290109213	5				NaN	NaN	0	NaN	2302	3131	5431
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5436	19.774	NaN	1986.9	30	0	348.63	0.038	+			13303	GKDYTLIFHL	10	44	402.8871765136719	NaN	0	402.8871765136719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GKDYTLIFHL_	ENSG00000197057|ENST00000639862|DTHD1;nc|ENSG00000197057|Q6ZMT9-2|DTHD1;nc|ENSG00000197057|Q6ZMT9|DTHD1	38.753607047826485	0.3729281687199363	5				NaN	NaN	0	NaN	2303	3131	5431
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5450	19.804	NaN	15560	30	0	1511.6	0.214	+			12394	GEAAKSVKL	9	69	451.7687091761674	901.5228654191349	2	451.7685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEAAKSVKL_	ENSG00000189334|ENST00000344616|S100A14	91.26522074875469	0.06129826844580791	5				NaN	NaN	0	NaN	2314	3134	5449
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5451	19.808	NaN	8893.4	30	0	2908.7	0.106	+			44652	TTGAVLGQK	9	62	437.7532801436407	873.4920073540815	2	437.7528991699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTGAVLGQK_	chr3:58640177-58645509|101|32.06|0.87|5.2|-|2|FAM3D,FAM3D|2;ENSG00000198643|ENST00000358781|FAM3D;FAM3D|p.G139Vfs*16|1|0.28|ENSG00000198643|chr3:58637183-58637183|C/-|frameshift_variant	116.90359126533652	0.02307425081617795	5				NaN	NaN	0	NaN	2315	3134	5449
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5452	19.809	NaN	2667.8	30	0	543.84	0.106	+			1567	AGGNLAAAL	9	40	379.2137499878709	NaN	0	379.2137145996094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AGGNLAAAL_	ENSG00000144959|ENST00000475381|NCEH1;nc|ENSG00000144959|Q6PIU2-2|NCEH1;nc|ENSG00000144959|Q6PIU2-3|NCEH1	60.29395666154354	0.1480651883005104	5				NaN	NaN	0	NaN	2316	3134	5449
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5453	19.811	NaN	3936.2	30	0	2127.8	0.106	+			13622	GMAWPPGRV	9	54	485.75127286358156	969.4879927939631	2	485.7508239746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GMAWPPGRV_	ENST00000325327.3_1_19:2430242-2430563:-|nuORF	38.80614096846853	0.43426287593479557	5				NaN	NaN	0	NaN	2317	3134	5449
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5454	19.813	NaN	1266.4	30	0	135.08	0.106	+			5369	ATYAGVGANK	10	48	476.2478332519531	NaN	0	476.2478332519531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATYAGVGANK_	ENSG00000178038|ENST00000318962|ALS2CL;ENST00000383742.7_2_3:46712476-46718839:-|nuORF;ENST00000434140.5_2_3:46717393-46723043:-|nuORF;ENST00000486301.5_1_3:46717393-46718248:-|nuORF;nc|ENSG00000178038|Q60I27-2|ALS2CL;nc|ENSG00000178038|Q60I27-3|ALS2CL;nc|ENSG00000178038|Q60I27-6|ALS2CL	47.95952297671804	0.31850267256932663	5				NaN	NaN	0	NaN	2318	3134	5449
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5455	19.815	NaN	2231.4	30	0	790.72	0.037			+	-1	SLICIAVIVI	10	31	367.56437271014363	NaN	0	367.5644226074219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_SLIC(Carbamidomethyl (C))IAVIVI_	REV__PLA2R1|p.T1415I|1|0.23|ENSG00000153246|chr2:159941926-159941926|G/A|missense_variant	36.446750945000026	0.3805027428805705	5				NaN	NaN	0	NaN	2319	3134	5449
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5456	19.815	NaN	11799	30	0	4073	0.141	+			43701	TKLEHARIK	9	66	548.3356182233214	1094.6566835134427	2	548.8373413085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TKLEHARIK_	CLIP1|p.E992Lfs*32|1|0.2|ENSG00000130779|chr12:122328315-122328321|TGCTTCT/-|frameshift_variant;CLIP1|p.M1151Wfs*8|1|0.31|ENSG00000130779|chr12:122316771-122316771|T/-|frameshift_variant;ENSG00000130779|ENST00000620786|CLIP1;nc|ENSG00000130779|P30622-1|CLIP1	69.6276240434122	0.14239879520340665	5				NaN	NaN	0	NaN	2320	3134	5449
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5474	19.855	NaN	9427.5	30	0	4872	0.214			+	7469	DGAHLATL	8	45	399.21135054152546	796.408148149851	2	399.21136474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DGAHLATL_	REV__ENST00000281523.7_1_3:21792410-21792695:-|nuORF	45.9519527083369	0.6193794311207887	5				NaN	NaN	0	NaN	2335	3137	5473
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5475	19.858	NaN	10431	30	0	7723.1	0.106	+			48441	VTKRHVDLK	9	40	365.8927253845803	1094.6563467539409	3	365.89276123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTKRHVDLK_	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42|TTN;TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;TTN|p.D20259Rfs*40|1|0.44|ENSG00000155657|chr2:178583105-178583106|-/T|frameshift_variant;TTN|p.D21555Ifs*6|1|0.33|ENSG00000155657|chr2:178576659-178576659|G/-|frameshift_variant;TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;TTN|p.E15132Sfs*22|1|0.27|ENSG00000155657|chr2:178612094-178612094|C/-|frameshift_variant;TTN|p.E20392Dfs*6|1|0.04|ENSG00000155657|chr2:178582357-178582358|-/TTTAAAATTA|frameshift_variant;TTN|p.E20392Kfs*4|1|0.02|ENSG00000155657|chr2:178582359-178582360|-/TTTT|frameshift_variant;TTN|p.F18705Lfs*8|1|0.37|ENSG00000155657|chr2:178590687-178590687|A/-|frameshift_variant;TTN|p.G19920Afs*12|1|0.42|ENSG00000155657|chr2:178584961-178584961|G/-|frameshift_variant;TTN|p.G22029Efs*22|2|0.13|ENSG00000155657|chr2:178575125-178575125|T/-|frameshift_variant;TTN|p.I24998Nfs*2|1|0.35|ENSG00000155657|chr2:178566216-178566217|-/T|frameshift_variant;TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;TTN|p.K26626Nfs*34|1|0.34|ENSG00000155657|chr2:178561331-178561331|T/-|frameshift_variant;TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant;TTN|p.N15496Ifs*16|1|0.09|ENSG00000155657|chr2:178610116-178610116|T/-|frameshift_variant;TTN|p.P16126Rfs*3|1|0.25|ENSG00000155657|chr2:178607301-178607302|TG/-|frameshift_variant;TTN|p.P22810Hfs*10|1|0.03|ENSG00000155657|chr2:178572780-178572781|-/AAAT|frameshift_variant;TTN|p.V22573Cfs*4|2|0.31|ENSG00000155657|chr2:178573492-178573492|C/-|frameshift_variant;TTN|p.V27442Cfs*4|1|0.05|ENSG00000155657|chr2:178558107-178558108|-/A|frameshift_variant	32.81241826257853	0.4965981579233955	5				NaN	NaN	0	NaN	2336	3137	5473
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5476	19.86	NaN	6931.9	30	0	2823.6	0.106	+			49013	VVGPVGAGK	9	49	392.23997434986853	782.4653957665371	2	392.24005126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVGPVGAGK_	ABCC4|p.L883Wfs*7|2|0.22|ENSG00000125257|chr13:95083178-95083178|A/-|frameshift_variant;ABCC4|p.T775Rfs*21|1|0.09|ENSG00000125257|chr13:95161322-95161323|-/AGTATGTCTT|frameshift_variant;ABCC6|p.L780Wfs*31|1|0.44|ENSG00000091262|chr16:16178875-16178875|G/-|frameshift_variant;ENSG00000091262|ENST00000205557|ABCC6;ENSG00000125257|ENST00000645237|ABCC4;nc|ENSG00000091262|O95255-3|ABCC6;nc|ENSG00000125257|O15439-2|ABCC4;nc|ENSG00000125257|O15439-3|ABCC4;nc|ENSG00000125257|O15439-4|ABCC4	45.9519527083369	0.35044536499095585	5				NaN	NaN	0	NaN	2337	3137	5473
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5477	19.862	NaN	2079.6	30	0	430.78	0.106				-1	SMAKAMSR	8	52	457.216505561502	912.418458189804	2	457.21697998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Oxidation (M)	_SM(Oxidation (M))AKAM(Oxidation (M))SR_	ENSG00000174799|ENST00000257287|CEP135	45.97224482568171	0.6192535143389125	5				NaN	NaN	0	NaN	2338	3137	5473
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5478	19.864	NaN	1220.8	30	0	179.46	0.106	+			21674	KQAWLIKN	8	50	500.7991606858249	NaN	0	500.7988586425781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KQAWLIKN_	ENSG00000074803|ENST00000380993|SLC12A1;nc|ENSG00000074803|Q13621-3|SLC12A1	68.484700416344	1.7418937515398478	5				NaN	NaN	0	NaN	2339	3137	5473
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5479	19.866	NaN	3961.1	30	0	770.78	0.036	+			22198	KSTELLIRK	9	70	544.3454034430443	1086.6762539528886	2	544.3447875976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KSTELLIRK_	ENSG00000132475|ENST00000254810|H3-3B;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000168148|ENST00000366696|H3-4;ENSG00000183598|ENST00000331491|H3C13;ENSG00000188375|ENST00000340398|H3-5;ENSG00000197153|ENST00000359303|H3C12;ENSG00000197409|ENST00000356476|H3C4;ENSG00000203811|ENST00000369158|H3C14;ENSG00000203852|ENST00000403683|H3C15;ENSG00000273983|ENST00000614378|H3C8;ENSG00000274750|ENST00000614911|H3C6;ENSG00000275379|ENST00000616365|H3C11;ENSG00000275714|ENST00000613854|H3C1;ENSG00000277775|ENST00000618052|H3C7;ENSG00000278828|ENST00000685041|H3C10;ENST00000401004.2_1:120904811-120905087:+|nuORF;ENST00000586518.1_1_17:73774674-73775034:-|nuORF;nc|ENSG00000273213|Q5TEC6|H3-7	104.01359247289065	0.03510646158778409	5				NaN	NaN	0	NaN	2340	3137	5473
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5495	19.899	NaN	6907.5	30	0	727.84	0.214	+			35827	SEDAEKKVL	9	74	509.7752239279437	1017.5358949226875	2	509.7749328613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEDAEKKVL_	ENSG00000060138|ENST00000228251|YBX3;ENST00000566722.1_1_16:31580383-31580761:-|nuORF;nc|ENSG00000060138|P16989-2|YBX3;nc|ENSG00000060138|P16989-3|YBX3	115.49404669440601	0.023927554121326553	5				NaN	NaN	0	NaN	2353	3140	5494
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5496	19.903	NaN	5215.3	30	0	2701.3	0.106	+			22199	KSTELLIRK	9	45	363.2327095825336	1086.6762993478008	3	363.232666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KSTELLIRK_	ENSG00000132475|ENST00000254810|H3-3B;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000168148|ENST00000366696|H3-4;ENSG00000183598|ENST00000331491|H3C13;ENSG00000188375|ENST00000340398|H3-5;ENSG00000197153|ENST00000359303|H3C12;ENSG00000197409|ENST00000356476|H3C4;ENSG00000203811|ENST00000369158|H3C14;ENSG00000203852|ENST00000403683|H3C15;ENSG00000273983|ENST00000614378|H3C8;ENSG00000274750|ENST00000614911|H3C6;ENSG00000275379|ENST00000616365|H3C11;ENSG00000275714|ENST00000613854|H3C1;ENSG00000277775|ENST00000618052|H3C7;ENSG00000278828|ENST00000685041|H3C10;ENST00000401004.2_1:120904811-120905087:+|nuORF;ENST00000586518.1_1_17:73774674-73775034:-|nuORF;nc|ENSG00000273213|Q5TEC6|H3-7	32.81241826257853	0.4965981579233955	5				NaN	NaN	0	NaN	2354	3140	5494
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5497	19.905	NaN	2946.3	30	0	538.95	0.106	+			15940	HAFESSQKY	9	69	548.7571174039982	NaN	0	548.757568359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HAFESSQKY_	ENSG00000100027|ENST00000339468|YPEL1;ENSG00000175155|ENST00000312655|YPEL2;ENST00000477675.1_1_22:22055420-22058252:-|nuORF;YPEL1|p.E102A|1|0.07|ENSG00000100027|chr22:21701184-21701184|T/G|missense_variant	65.46538089061403	0.1260090208616529	5				NaN	NaN	0	NaN	2355	3140	5494
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5498	19.906	NaN	1052	30	0	173.2	0.106	+			47828	VSKSLQAMK	9	40	496.2828063964844	NaN	0	496.2828063964844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSKSLQAMK_	CAB39L|p.D96Mfs*2|3|0.25|ENSG00000102547|chr13:49359824-49359824|T/-|frameshift_variant;ENSG00000102547|ENST00000409308|CAB39L	52.936696900407355	0.1864545979552969	5				NaN	NaN	0	NaN	2356	3140	5494
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5499	19.908	NaN	439.37	30	0	150.54	0.106			+	-1	VAEPIALLM	9	18	324.8537292480469	NaN	0	324.8537292480469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_VAEPIALLM(Oxidation (M))_	REV__ENSG00000126010|ENST00000380289|GRPR	21.9598887501803	0.3626577482100488	5				NaN	NaN	0	NaN	2357	3140	5494
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5500	19.91	NaN	885.07	30	0	454.3	0.037				-1	VCVCVCTEGL	10	20	570.2478689882881	1138.4811850433762	2	570.2488403320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Carbamidomethyl (C)	_VCVC(Carbamidomethyl (C))VC(Carbamidomethyl (C))TEGL_	ENST00000607016.1_1_6:34252884-34253115:-|nuORF	12.206847966760668	0.7544206824696849	5				NaN	NaN	0	NaN	2358	3140	5494
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5501	19.911	NaN	784.22	30	0	335.98	0.141	+			16431	HESENDLFH	9	31	564.2430097809282	1126.4714666286563	2	564.243408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HESENDLFH_	ENSG00000180777|ENST00000690538|ANKRD30B;nc|ENSG00000180777|Q9BXX2|ANKRD30B	24.519189625965996	0.574102787014149	5				NaN	NaN	0	NaN	2359	3140	5494
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5515	19.942	NaN	16287	30	0	4453.1	0.214	+			39603	STHGTFLNK	9	72	502.7614538204148	1003.5083547076296	2	502.7615661621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STHGTFLNK_	ENSG00000163798|ENST00000326019|SLC4A1AP;nc|ENSG00000163798|Q9BWU0-1|SLC4A1AP;SLC4A1AP|p.F378Lfs*8|1|0.18|ENSG00000163798|chr2:27667375-27667375|T/-|frameshift_variant;SLC4A1AP|p.L669Tfs*8|1|0.38|ENSG00000163798|chr2:27685159-27685160|-/A|frameshift_variant	90.60085204095205	0.06317133949006545	5				NaN	NaN	0	NaN	2370	3143	5514
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5516	19.946	NaN	13821	30	0	3777.7	0.106	+			44395	TSLKSIMKK	9	69	518.3147681448609	1034.6149833565216	2	518.3154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TSLKSIMKK_	ENSG00000132854|ENST00000371153|KANK4;nc|ENSG00000132854|Q5T7N3-2|KANK4	114.85826248499774	0.024312442104607014	5				NaN	NaN	0	NaN	2371	3143	5514
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5517	19.948	NaN	31795	30	0	6519.2	0.106	+			39836	STLKSIMKK	9	88	345.8791170550287	1034.615521765286	3	345.8791198730469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STLKSIMKK_	ENSG00000107104|ENST00000382297|KANK1;ENST00000354485.5_1_9:730997-731267:+|nuORF;ENST00000489369.5_1_9:676972-732786:+|nuORF;nc|ENSG00000107104|Q14678-2|KANK1	126.24258497203832	0.01742065577488747	5				NaN	NaN	0	NaN	2372	3143	5514
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5518	19.949	NaN	28182	30	0	8562.2	0.106	+			39604	STHGTFLNK	9	89	335.51006090439546	1003.5083533133864	3	335.5100402832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STHGTFLNK_	ENSG00000163798|ENST00000326019|SLC4A1AP;nc|ENSG00000163798|Q9BWU0-1|SLC4A1AP;SLC4A1AP|p.F378Lfs*8|1|0.18|ENSG00000163798|chr2:27667375-27667375|T/-|frameshift_variant;SLC4A1AP|p.L669Tfs*8|1|0.38|ENSG00000163798|chr2:27685159-27685160|-/A|frameshift_variant	62.107414245175825	0.1960472003779324	5				NaN	NaN	0	NaN	2373	3143	5514
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5519	19.951	NaN	20015	30	0	5705	0.106	+			1245	AERPGEAAV	9	64	450.2325252402399	898.4504975472798	2	450.2323303222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AERPGEAAV_	ENSG00000277443|ENST00000612661|MARCKS	49.536043120802724	0.308405419312776	5				NaN	NaN	0	NaN	2374	3143	5514
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5520	19.953	NaN	2229.7	30	0	459.29	0.036	+			31265	QHRSQSSGIL	10	61	556.7949003752782	1111.5752478173563	2	556.7952880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QHRSQSSGIL_	ENST00000526047.1_1_11:74618188-74632322:-|nuORF	39.252832667884924	0.5560298534376815	5				NaN	NaN	0	NaN	2375	3143	5514
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5521	19.954	NaN	1143.3	30	0	99.88	0.14			+	30525	QAIGYDAIKA	10	53	525.2836487294384	NaN	0	525.283447265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QAIGYDAIKA_	REV__ENSG00000188906|ENST00000298910|LRRK2;REV__ENST00000479187.5_1_12:40692272-40758932:+|nuORF;REV__LRRK2|p.N2261Kfs*9|1|0.28|ENSG00000188906|chr12:40356119-40356120|-/A|frameshift_variant	42.33807565288922	0.3540422799631949	5				NaN	NaN	0	NaN	2376	3143	5514
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5538	19.991	NaN	2491.2	30	0	317.24	0.214				-1	SLCELLVAL	9	57	509.28801811141136	NaN	0	509.2880554199219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SLC(Carbamidomethyl (C))ELLVAL_	ENSG00000173145|ENST00000371361|NOC3L;NOC3L|p.L425Yfs*3|1|0.14|ENSG00000173145|chr10:94346540-94346540|A/-|frameshift_variant;NOC3L|p.T423Hfs*5|1|0.09|ENSG00000173145|chr10:94346547-94346547|T/-|frameshift_variant	42.47446043378293	0.25855550551448697	5				NaN	NaN	0	NaN	2390	3146	5537
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5539	19.994	NaN	4187.7	30	0	442.77	0.106				-1	 	0	67	610.2732806415717	1827.7980125249148	3	610.6077880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2391	3146	5537
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5540	19.996	NaN	3094.2	30	0	1652.7	0.106			+	-1	AGDHSMGTWR	10	54	567.2437005437712	1132.4728481543423	2	567.2440185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_AGDHSM(Oxidation (M))GTWR_	REV__ENST00000498979.6_1_11:119252535-119369460:+|nuORF;REV__ENST00000500970.5_1_11:119252535-119379828:+|nuORF;REV__ENST00000530002.1_1_11:119252556-119346072:+|nuORF;REV__ENST00000577297.5_1_11:119252496-119280314:+|nuORF;REV__ENST00000578923.1_1_11:119252535-119369366:+|nuORF	31.529811441608018	0.6223461015008678	5				NaN	NaN	0	NaN	2392	3146	5537
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5541	19.998	NaN	2051.3	30	0	298.13	0.106	+			7996	DTEVTGKK	8	49	439.23468017578125	NaN	0	439.23468017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DTEVTGKK_	ENSG00000136824|ENST00000374793|SMC2;nc|ENSG00000136824|O95347-2|SMC2;SMC2|p.T751Pfs*9|3|0.3|ENSG00000136824|chr9:104123220-104123220|A/-|frameshift_variant	40.5726180659479	1.7418937515398478	5				NaN	NaN	0	NaN	2393	3146	5537
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5542	20	NaN	2014.7	30	0	294.36	0.106	+			9535	ELDGGRRGLV	10	52	536.2995953927083	1070.5846378522165	2	536.3001098632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ELDGGRRGLV_	ENSG00000188070|ENST00000433688|ZFTA	49.44154591367651	0.46214596422418036	5				NaN	NaN	0	NaN	2394	3146	5537
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5543	20.002	NaN	946.97	30	0	48.486	0.106			+	21754	KQPPALGP	8	39	404.2396240234375	NaN	0	404.2396240234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KQPPALGP_	REV__ENSG00000180043|ENST00000424985|GARIN5B	28.2542754592877	1.7418937515398478	5				NaN	NaN	0	NaN	2395	3146	5537
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5544	20.003	NaN	905.06	30	0	114.61	0.036			+	7085	CVPVCCAQQY	10	42	557.2299194335938	NaN	0	557.2299194335938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_CVPVCCAQQY_	REV__ENSG00000243489|ENST00000334670|KRTAP10-11	30.503639358989545	0.4000169810673414	5				NaN	NaN	0	NaN	2396	3146	5537
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5558	20.033	NaN	24653	30	0	9667.1	0.214	+			3945	ATATELTTK	9	71	468.2558728480084	934.4971927628168	2	468.25555419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATATELTTK_	ENSG00000133606|ENST00000255977|MKRN1;ENST00000475010.5_1_7:140155450-140179030:-|nuORF;nc|ENSG00000133606|Q9UHC7-2|MKRN1;nc|ENSG00000133606|Q9UHC7-3|MKRN1;nc|ENSG00000133606|Q9UHC7-4|MKRN1;nc|ENSG00000238222|Q13434|MKRN4P	176.44474024533739	0.0016668318535579616	5				NaN	NaN	0	NaN	2407	3149	5557
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5559	20.037	NaN	12141	30	0	2397.1	0.106	+			27635	MPQGGGQHY	9	71	487.7109436462867	973.4073343593734	2	487.71075439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MPQGGGQHY_	ENSG00000141380|ENST00000415083|SS18;nc|ENSG00000141380|Q15532-2|SS18	124.59426212874841	0.018418509520798258	5				NaN	NaN	0	NaN	2408	3149	5557
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5560	20.039	NaN	2158.1	30	0	354.33	0.106			+	44258	TSALFQLKK	9	57	518.3147681448609	1034.6149833565216	2	518.3154907226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TSALFQLKK_	REV__HERVH-int_dup3527|chrX:4542813-4545870:-|8.094520876636611|0.0139942278604804|9.18|476.0|40|2|sense	49.44154591367651	0.3095138337212152	5				NaN	NaN	0	NaN	2409	3149	5557
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5561	20.04	NaN	5016.8	30	0	1440.2	0.106	+			38607	SSGPSTPLK	9	59	437.2374491804193	872.4603454276386	2	437.23724365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSGPSTPLK_	C2CD5|p.D676Mfs*40|1|0.33|ENSG00000111731|chr12:22474769-22474769|T/-|frameshift_variant;C2CD5|p.F331Lfs*5|1|0.32|ENSG00000111731|chr12:22513345-22513345|C/-|frameshift_variant;ENSG00000111731|ENST00000446597|C2CD5;nc|ENSG00000111731|Q86YS7|C2CD5	78.26377905018397	0.10505600812668463	5				NaN	NaN	0	NaN	2410	3149	5557
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5562	20.042	NaN	807.3	30	0	142.76	0.106	+			18957	IVQLEGYQK	9	43	539.302015114763	1076.5894772963259	2	540.7451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IVQLEGYQK_	ENST00000457147.1_1_10:75013703-75013874:+|nuORF	17.364965105453717	0.6112419832031293	5				NaN	NaN	0	NaN	2411	3149	5557
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5563	20.044	NaN	2029.6	30	0	611.62	0.034	+			15764	GVSTNISTK	9	46	453.74783226140244	905.4811115896049	2	453.74786376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GVSTNISTK_	ENSG00000110713|ENST00000324932|NUP98;nc|ENSG00000110713|P52948-2|NUP98;nc|ENSG00000110713|P52948-3|NUP98;nc|ENSG00000110713|P52948-4|NUP98;nc|ENSG00000110713|P52948-6|NUP98;nc|ENSG00000110713|P52948|NUP98;NUP98|p.F410Lfs*77|1|0.19|ENSG00000110713|chr11:3753404-3753404|A/-|frameshift_variant;NUP98|p.N1328Tfs*89|2|0.22|ENSG00000110713|chr11:3699159-3699159|T/-|frameshift_variant	72.87924865735499	0.12833875048249987	5				NaN	NaN	0	NaN	2412	3149	5557
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5564	20.045	NaN	1263.5	30	0	214.55	0.141			+	-1	ASAAVRPCCC	10	49	547.7289749289768	NaN	0	547.7286376953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C)	_ASAAVRPC(Carbamidomethyl (C))C(Carbamidomethyl (C))C_	REV__ENST00000530937.5_1_11:119185957-119187838:-|nuORF	35.61828744233558	0.3832230071539346	5				NaN	NaN	0	NaN	2413	3149	5557
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5575	20.072	NaN	3758.7	30	0	622.98	0.214				-1	TVCEKTVLK	9	57	539.302015114763	1076.5894772963259	2	539.302978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_TVC(Carbamidomethyl (C))EKTVLK_	ENSG00000198722|ENST00000635942|UNC13B;nc|ENSG00000198722|O14795-2|UNC13B;nc|ENSG00000198722|O14795|UNC13B	109.47833844074708	0.029530294723441826	5				NaN	NaN	0	NaN	2421	3152	5574
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5576	20.075	NaN	2587.7	30	0	540.1	0.106	+			38622	SSGVPNPPK	9	48	441.7377140778773	881.4608752225546	2	441.73681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSGVPNPPK_	ENSG00000115207|ENST00000264720|GTF3C2	62.107414245175825	0.1960472003779324	5				NaN	NaN	0	NaN	2422	3152	5574
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5577	20.077	NaN	2068.6	30	0	380.02	0.106			+	43523	TGTGVPLRK	9	50	464.7823091548412	927.5500653764824	2	464.7584228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TGTGVPLRK_	REV__ENSG00000100578|ENST00000652326|KIAA0586;REV__KIAA0586|p.K791Rfs*14|1|0.33|ENSG00000100578|chr14:58467891-58467891|A/-|frameshift_variant;REV__KIAA0586|p.L223Hfs*12|1|0.04|ENSG00000100578|chr14:58444079-58444080|-/CATTT|frameshift_variant;REV__KIAA0586|p.P1497Lfs*6|1|0.11|ENSG00000100578|chr14:58547816-58547816|C/-|frameshift_variant;REV__KIAA0586|p.S722Qfs*8|1|0.39|ENSG00000100578|chr14:58465980-58465980|T/-|frameshift_variant;REV__nc|ENSG00000100578|Q9BVV6-2|KIAA0586;REV__nc|ENSG00000100578|Q9BVV6-3|KIAA0586;REV__nc|ENSG00000100578|Q9BVV6|KIAA0586	27.882242232435846	0.5426732730940306	5				NaN	NaN	0	NaN	2423	3152	5574
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5578	20.079	NaN	1007	30	0	486.43	0.106				-1	GRNLKSNWM	9	35	561.2807877468388	NaN	0	561.2803344726562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_GRNLKSNWM(Oxidation (M))_	ENST00000608694.1_1_7:129251138-129251447:-|nuORF	26.69291269510374	0.34280015626154364	5				NaN	NaN	0	NaN	2424	3152	5574
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5579	20.081	NaN	1518.5	30	0	305.78	0.034			+	-1	CAGCAALGSM	10	41	478.685323417429	955.356093901658	2	478.68548583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C),Oxidation (M)	_CAGC(Carbamidomethyl (C))AALGSM(Oxidation (M))_	REV__ENSG00000125434|ENST00000577745|SLC25A35;REV__nc|ENSG00000125434|Q3KQZ1-2|SLC25A35;REV__nc|ENSG00000125434|Q3KQZ1-3|SLC25A35;REV__nc|ENSG00000125434|Q3KQZ1-4|SLC25A35	17.364965105453717	0.7282106878714807	5				NaN	NaN	0	NaN	2425	3152	5574
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5593	20.11	NaN	11729	30	0	5486.8	0.214	+			12359	GDPTYAFNIR	10	49	385.19250759022634	1152.555693370879	3	385.1924743652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GDPTYAFNIR_	ENSG00000173064|ENST00000682272|HECTD4;ENST00000547085.1_1_12:112600816-112607652:-|nuORF;HECTD4|p.A4187Pfs*44|1|0.07|ENSG00000173064|chr12:112163201-112163201|C/-|frameshift_variant;nc|ENSG00000173064|Q9Y4D8-4|HECTD4;nc|ENSG00000173064|Q9Y4D8|HECTD4	41.42661286455405	0.5359995577334734	5				NaN	NaN	0	NaN	2436	3155	5592
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5594	20.114	NaN	4147.4	30	0	423.75	0.106	+			42005	SVYKEAIQK	9	70	533.3008382746275	1064.587123616055	2	533.3015747070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVYKEAIQK_	ENSG00000179104|ENST00000321196|TMTC2;ENST00000551915.5_1_12:83081308-83379891:+|nuORF;TMTC2|p.A737Qfs*4|1|0.25|ENSG00000179104|chr12:83050953-83050953|A/-|frameshift_variant	68.84614121027924	0.14577793175421136	5				NaN	NaN	0	NaN	2437	3155	5592
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5595	20.116	NaN	2758	30	0	267.75	0.106			+	36360	SESVEAVAK	9	59	460.2388881143309	918.4632232954618	2	460.2366638183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SESVEAVAK_	REV__ENSG00000177548|ENST00000358201|RABEP2;REV__ENST00000561803.5_1_16:28927516-28936514:-|nuORF;REV__ENST00000562475.5_1_16:28929220-28935949:-|nuORF;REV__ENST00000562590.5_1_16:28922190-28936514:-|nuORF;REV__ENST00000564579.1_1_16:28931058-28935949:-|nuORF;REV__ENST00000570030.1_1_16:28931058-28936514:-|nuORF;REV__nc|ENSG00000177548|Q9H5N1-2|RABEP2;REV__RABEP2|p.P206Rfs*8|1|0.21|ENSG00000177548|chr16:28914513-28914513|G/-|frameshift_variant	87.69643885390035	0.07135982304947239	5				NaN	NaN	0	NaN	2438	3155	5592
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5596	20.118	NaN	1560	30	0	299.97	0.106	+			48704	VTTLPHNVM	9	50	514.2656270736667	1026.5167012141333	2	514.7676391601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_VTTLPHNVM(Oxidation (M))_	NCSTN|p.R323H|1|0.43|ENSG00000162736|chr1:160352178-160352178|G/A|missense_variant	51.33545320467046	0.2872990594074956	5				NaN	NaN	0	NaN	2439	3155	5592
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5597	20.12	NaN	2992.7	30	0	1127.2	0.106	+			3003	ASFDKAKLK	9	57	504.2975311917768	1006.5805094503536	2	504.2979431152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASFDKAKLK_	ENSG00000034510|ENST00000233143|TMSB10	67.49366992349736	0.1516260258713357	5				NaN	NaN	0	NaN	2440	3155	5592
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5598	20.121	NaN	954.79	30	0	183.9	0.032			+	18	AAAGAREAL	9	42	415.22998046875	NaN	0	415.22998046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AAAGAREAL_	REV__ENST00000400384.6_1_18:48086518-48189474:+|nuORF	27.882242232435846	0.3367954786602879	5				NaN	NaN	0	NaN	2441	3155	5592
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5599	20.122	NaN	2842.6	30	0	644.81	0.14	+			30241	PSTLGGRGGKI	11	61	521.8034736846431	1041.5923944360861	2	521.8034057617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PSTLGGRGGKI_	AluSx1_dup105715|chr19:17808831-17809133:-|1.057486810986726|0.069666496377167|3.92|481.0|9|3|sense	40.05817265558897	0.5571470695993369	5				NaN	NaN	0	NaN	2442	3155	5592
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5612	20.151	NaN	6208.8	30	0	750.73	0.214			+	25690	LRIVNNTV	8	54	464.7823091548412	927.5500653764824	2	464.78192138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LRIVNNTV_	REV__ENSG00000095319|ENST00000372577|NUP188;REV__ENST00000477069.5_1_9:131747266-131765892:+|nuORF;REV__nc|ENSG00000095319|Q5SRE5-2|NUP188;REV__NUP188|p.L837Wfs*19|1|0.15|ENSG00000095319|chr9:128988157-128988157|C/-|frameshift_variant	44.116797842482775	0.6307669463330267	5				NaN	NaN	0	NaN	2452	3158	5611
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5613	20.155	NaN	3081.6	30	0	603.5	0.106			+	48003	VSQLQLSQ	8	57	451.75053092150546	901.4865089098109	2	451.75030517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSQLQLSQ_	REV__ENST00000258341.4_1_1:183094003-183094580:+|nuORF	77.31757898189308	0.345924878368729	5				NaN	NaN	0	NaN	2453	3158	5611
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5614	20.157	NaN	2475.5	30	0	377.63	0.106			+	31923	QQLSSIQKK	9	65	530.3119500156346	NaN	0	530.311767578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QQLSSIQKK_	REV__CON__ENSEMBL:ENSBTAP00000038253	60.11826168202944	0.14881452885248947	5				NaN	NaN	0	NaN	2454	3158	5611
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5615	20.158	NaN	1420	30	0	202.84	0.106	+			7524	DGRFAGLTS	9	50	462.23375096502434	922.4529489968487	2	462.233642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DGRFAGLTS_	ENSG00000083857|ENST00000441802|FAT1;FAT1|p.G2934Vfs*3|2|0.37|ENSG00000083857|chr4:186617787-186617787|T/-|frameshift_variant;FAT1|p.N3847Yfs*7|1|0.03|ENSG00000083857|chr4:186601370-186601371|-/TTATA|frameshift_variant;FAT1|p.P3228Lfs*42|1|0.27|ENSG00000083857|chr4:186611556-186611556|G/-|frameshift_variant;FAT1|p.P4313Lfs*36|1|0.34|ENSG00000083857|chr4:186596602-186596602|G/-|frameshift_variant;FAT1|p.Q2933Hfs*14|1|0.33|ENSG00000083857|chr4:186617787-186617788|-/G|frameshift_variant	58.78195531508484	0.22376836668196862	5				NaN	NaN	0	NaN	2455	3158	5611
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5616	20.16	NaN	374.07	30	0	106.59	0.106			+	-1	QQKMLQKVQK	10	25	637.8655395507812	NaN	0	637.8655395507812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_QQKM(Oxidation (M))LQKVQK_	REV__ENSG00000101868|ENST00000379068|POLA1;REV__ENST00000480125.1_1_X:24766454-24793337:+|nuORF;REV__nc|ENSG00000101868|P09884|POLA1	20.94693142431847	0.4201028297492154	5				NaN	NaN	0	NaN	2456	3158	5611
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5617	20.162	NaN	1622.8	30	0	620.18	0.036			+	-1	NKLPSFHLC	9	41	558.2887896908834	1114.5630264485667	2	558.2892456054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_NKLPSFHLC(Carbamidomethyl (C))_	REV__ENST00000257724.7_1_7:114658065-114658206:+|nuORF	26.79610172149135	0.5528238334041078	5				NaN	NaN	0	NaN	2457	3158	5611
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5618	20.163	NaN	4263.1	30	0	367	0.141	+			16189	HEAQHGVTSL	10	66	539.7672998242434	1077.5200467152868	2	539.767333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HEAQHGVTSL_	ENSG00000100105|ENST00000266269|PATZ1;nc|ENSG00000100105|Q9HBE1-2|PATZ1;nc|ENSG00000100105|Q9HBE1-3|PATZ1;nc|ENSG00000100105|Q9HBE1-4|PATZ1	65.15724298150197	0.31893571707528906	5				NaN	NaN	0	NaN	2458	3158	5611
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5635	20.2	NaN	5679	30	0	1133.5	0.214	+			12685	GEKGERIHL	9	57	519.7881211918091	1037.561689450418	2	519.7886962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEKGERIHL_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	84.81729255234993	0.07947707105691067	5				NaN	NaN	0	NaN	2472	3161	5634
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5636	20.203	NaN	4865.1	30	0	690.8	0.106	+			39277	STARHLYLR	9	54	372.8806473359026	1115.620112607908	3	372.8806457519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STARHLYLR_	ENSG00000105372|ENST00000598742|RPS19	39.252832667884924	0.4290233611298554	5				NaN	NaN	0	NaN	2473	3161	5634
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5637	20.205	NaN	10355	30	0	6574.9	0.106			+	-1	LGVMEKRLLA	10	52	382.5618787392706	1144.6638068180118	3	382.56201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_LGVM(Oxidation (M))EKRLLA_	REV__ENSG00000182118|ENST00000366654|FAM89A	22.579656572578934	0.6954366826851017	5				NaN	NaN	0	NaN	2474	3161	5634
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5638	20.207	NaN	25931	30	0	4544.1	0.106			+	16868	HPGGWSDF	8	68	451.6930839830866	901.3716150329732	2	451.6930236816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HPGGWSDF_	REV__ENSG00000149328|ENST00000535456|GLB1L2;REV__ENST00000529077.5_1_11:134236970-134242406:+|nuORF	54.76467175910256	0.5536104764165384	5				NaN	NaN	0	NaN	2475	3161	5634
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5639	20.209	NaN	1741.3	30	0	576.99	0.106	+			16976	HPQQKVAVY	9	52	535.2936219530602	1068.5726909729203	2	535.2937622070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HPQQKVAVY_	ENSG00000102871|ENST00000345057|TRADD;ENST00000566104.1_1_16:67189803-67193780:-|nuORF	60.11826168202944	0.21262886028301267	5				NaN	NaN	0	NaN	2476	3161	5634
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5640	20.211	NaN	4223.9	30	0	1579.8	0.037			+	-1	LINMFCLLL	9	35	365.86980197045534	1094.587576511566	3	365.86962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_LINM(Oxidation (M))FCLLL_	REV__ENST00000549906.5_1_12:106704905-106706148:+|nuORF	29.14955571784316	0.5308295550522326	5				NaN	NaN	0	NaN	2477	3161	5634
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5641	20.211	NaN	3021	30	0	407.95	0.139	+			3885	ATAQAVAPPR	10	62	491.27744445544937	980.5403359776988	2	491.2774353027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATAQAVAPPR_	ENST00000609438.1_1_4:90171359-90228902:-|nuORF	82.7504851949679	0.1731497355276012	5				NaN	NaN	0	NaN	2478	3161	5634
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5656	20.245	NaN	6614.3	30	0	1383.2	0.214	+			2603	AQGNVYHLK	9	53	343.8538118885583	NaN	0	343.853759765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AQGNVYHLK_	ENSG00000143013|ENST00000370544|LMO4	44.377184641726394	0.24544280798894275	5				NaN	NaN	0	NaN	2490	3164	5655
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5657	20.248	NaN	1627.3	30	0	544.94	0.106			+	11190	FHCTLTEPG	9	62	531.2380945933547	NaN	0	531.2380981445312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_FHC(Carbamidomethyl (C))TLTEPG_	REV__ENST00000361906.7_1_22:38617127-38617379:-|nuORF	73.97473282117947	0.09202988758641674	5				NaN	NaN	0	NaN	2491	3164	5655
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5658	20.25	NaN	790.54	30	0	179.3	0.106			+	47618	VSAFAPLVVFG	11	45	553.8140869140625	NaN	0	553.8140869140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSAFAPLVVFG_	REV__ENSG00000148832|ENST00000278060|PAOX;REV__ENST00000368535.2_1_10:135193041-135204956:+|nuORF;REV__ENST00000476834.6_1_10:135196418-135204956:+|nuORF;REV__nc|ENSG00000254536|Q6QHF9-4|PAOX	34.172542307311794	0.4131234684587831	5				NaN	NaN	0	NaN	2492	3164	5655
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5659	20.252	NaN	929.54	30	0	83.658	0.106	+			17350	IAKGGAAL	8	41	350.7210693359375	NaN	0	350.7210693359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IAKGGAAL_	ENSG00000104413|ENST00000433389|ESRP1;ESRP1|p.L333Sfs*55|1|0.35|ENSG00000104413|chr8:94668009-94668009|G/-|frameshift_variant;ESRP1|p.N512Hfs*7|2|0.33|ENSG00000104413|chr8:94674383-94674384|AA/-|frameshift_variant;ESRP1|p.N512Kfs*8|1|0.48|ENSG00000104413|chr8:94674382-94674383|-/A|frameshift_variant;ESRP1|p.N512Tfs*2|2|0.36|ENSG00000104413|chr8:94674383-94674383|A/-|frameshift_variant;nc|ENSG00000104413|Q6NXG1-2|ESRP1;nc|ENSG00000104413|Q6NXG1-3|ESRP1;nc|ENSG00000104413|Q6NXG1-4|ESRP1;nc|ENSG00000104413|Q6NXG1-5|ESRP1	42.47446043378293	1.7418937515398478	5				NaN	NaN	0	NaN	2493	3164	5655
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5660	20.254	NaN	2233.3	30	0	418.29	0.106	+			48967	VVGCPLER	8	48	436.73646974032465	NaN	0	436.7364196777344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVGCPLER_	ENSG00000135253|ENST00000610776|KCP;nc|ENSG00000135253|Q6ZWJ8|KCP	30.503639358989545	1.7418937515398478	5				NaN	NaN	0	NaN	2494	3164	5655
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5661	20.256	NaN	759.49	30	0	75.686	0.035	+			651	AEAEKKVQL	9	46	508.29266357421875	NaN	0	508.29266357421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEAEKKVQL_	ENSG00000144747|ENST00000398559|TMF1;nc|ENSG00000144747|P82094-2|TMF1;TMF1|p.R506I|1|0.23|ENSG00000144747|chr3:69043811-69043811|C/A|missense_variant	31.529811441608018	0.3183796599642538	5				NaN	NaN	0	NaN	2495	3164	5655
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5662	20.256	NaN	1011.5	30	0	117.87	0.14				-1	DVDCYAQR	8	54	513.7184157692619	1025.4222786053238	2	513.7186279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_DVDC(Carbamidomethyl (C))YAQR_	ENSG00000107263|ENST00000683357|RAPGEF1;nc|ENSG00000107263|Q13905-2|RAPGEF1;nc|ENSG00000107263|Q13905-3|RAPGEF1;nc|ENSG00000107263|Q13905-4|RAPGEF1;nc|ENSG00000107263|Q13905|RAPGEF1	33.51558372728122	0.7005509609380386	5				NaN	NaN	0	NaN	2496	3164	5655
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5677	20.289	NaN	1245.9	30	0	516.67	0.214			+	16569	HFIKGCVDCK	10	37	575.2824976909175	1148.5504424486348	2	575.2822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HFIKGCVDCK_	REV__ENSG00000197343|ENST00000252713|ZNF655;REV__nc|ENSG00000197343|Q8N720-3|ZNF655	27.882242232435846	0.6521336255503853	5				NaN	NaN	0	NaN	2508	3167	5676
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5678	20.293	NaN	1631.9	30	0	159.74	0.106			+	20477	KEYESELAN	9	54	541.7523803710938	NaN	0	541.7523803710938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEYESELAN_	REV__tr|U7SM96|U7SM96_FUSNUProteintranslocasesubunitSecAOS=FusobacteriumnucleatumCTI-5OX=1316586GN=secAPE=3SV=1	39.252832667884924	0.27938773122138094	5				NaN	NaN	0	NaN	2509	3167	5676
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5679	20.295	NaN	2006.5	30	0	314.91	0.106			+	2552	AQAQQQFL	8	53	467.24334693135086	932.4721409295017	2	467.2434387207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AQAQQQFL_	REV__CCDC15|p.E164K|1|0.56|ENSG00000149548|chr11:124959977-124959977|G/A|missense_variant;REV__CCDC15|p.K194Rfs*29|2|0.35|ENSG00000149548|chr11:124975153-124975153|A/-|frameshift_variant;REV__CCDC15|p.L510Cfs*138|1|0.15|ENSG00000149548|chr11:124987750-124987750|T/-|frameshift_variant;REV__CCDC15|p.S196Ifs*6|2|0.29|ENSG00000149548|chr11:124975152-124975153|-/A|frameshift_variant;REV__ENSG00000149548|ENST00000344762|CCDC15	71.37791200682192	0.3954169775488141	5				NaN	NaN	0	NaN	2510	3167	5676
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5680	20.297	NaN	2296.1	30	0	640.99	0.106	+			48880	VVDCGTGYTK	10	66	550.258690928727	1098.502828924254	2	550.2593383789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_VVDC(Carbamidomethyl (C))GTGYTK_	ACTR3B-JMJD1C|1|fusion;ENSG00000115091|ENST00000263238|ACTR3;ENSG00000133627|ENST00000256001|ACTR3B;nc|ENSG00000133627|Q9P1U1-3|ACTR3B	66.96192283764107	0.30252237217063654	5				NaN	NaN	0	NaN	2511	3167	5676
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5681	20.299	NaN	1258.6	30	0	119.19	0.106	+			34362	RTQIPMSEK	9	51	545.2900786414564	1088.5656043497127	2	545.29052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RTQIPMSEK_	ENSG00000169435|ENST00000307439|RASSF6;nc|ENSG00000169435|Q6ZTQ3-3|RASSF6;nc|ENSG00000169435|Q6ZTQ3-4|RASSF6;nc|ENSG00000169435|Q6ZTQ3|RASSF6;RASSF6|p.K253Nfs*25|1|0.16|ENSG00000169435|chr4:73582195-73582195|T/-|frameshift_variant	60.69067153575145	0.20785722753015753	5				NaN	NaN	0	NaN	2512	3167	5676
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5682	20.3	NaN	1170.3	30	0	180.49	0.035			+	7743	DMRPLYGM	8	52	491.728271484375	NaN	0	491.728271484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DMRPLYGM_	REV__ENST00000469133.1_1_7:24749857-24749896:-|nuORF	37.028477286268924	1.7418937515398478	5				NaN	NaN	0	NaN	2513	3167	5676
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5683	20.301	NaN	1108.7	30	0	123.58	0.138	+			25882	LSGAHAQK	8	37	406.2251892089844	NaN	0	406.2251892089844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSGAHAQK_	ENSG00000114054|ENST00000251654|PCCB;ENST00000475214.5_1_3:135974226-136045892:+|nuORF;nc|ENSG00000114054|P05166-2|PCCB;PCCB|p.A153Lfs*3|1|0.38|ENSG00000114054|chr3:136261975-136261975|G/-|frameshift_variant	38.80614096846853	1.7418937515398478	5				NaN	NaN	0	NaN	2514	3167	5676
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5698	20.334	NaN	5261.8	30	0	1585.8	0.214	+			39255	STAMNGNLAK	10	68	503.7531911151574	1005.4918292971148	2	503.7534484863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STAMNGNLAK_	ENSG00000184675|ENST00000374869|AMER1	72.87924865735499	0.25379688738724415	5				NaN	NaN	0	NaN	2526	3170	5697
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5699	20.338	NaN	4115.7	30	0	1478.2	0.106	+			5133	ATSSVSALK	9	51	432.24512351591864	862.4756940986373	2	432.2452087402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATSSVSALK_	ENSG00000177084|ENST00000320574|POLE;ENST00000539357.1_1_12:133257669-133263919:-|nuORF;POLE|p.A2030Pfs*18|1|0.14|ENSG00000177084|chr12:132632712-132632712|C/-|frameshift_variant;POLE|p.E396Sfs*16|1|0.1|ENSG00000177084|chr12:132675438-132675438|C/-|frameshift_variant;POLE|p.K1170Nfs*49|1|0.15|ENSG00000177084|chr12:132657208-132657208|T/-|frameshift_variant;POLE|p.K325Sfs*19|1|0.27|ENSG00000177084|chr12:132676142-132676142|G/-|frameshift_variant	67.49366992349736	0.1516260258713357	5				NaN	NaN	0	NaN	2527	3170	5697
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5700	20.34	NaN	4705.5	30	0	854.97	0.106	+			48989	VVGKPIEVQK	10	69	548.8400877832321	1095.665622633264	2	548.8411865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVGKPIEVQK_	ENSG00000166391|ENST00000198801|MOGAT2;nc|ENSG00000166391|Q3SYC2-2|MOGAT2	99.78786539795823	0.07832680346773438	5				NaN	NaN	0	NaN	2528	3170	5697
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5701	20.342	NaN	1172.8	30	0	90.692	0.106	+			42643	TAVGSSTRY	9	54	471.23854443634593	940.4625359394919	2	471.238037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TAVGSSTRY_	ENSG00000173120|ENST00000529006|KDM2A;ENST00000524657.1_1_11:67020024-67022523:+|nuORF;nc|ENSG00000173120|Q9Y2K7-2|KDM2A;nc|ENSG00000173120|Q9Y2K7-4|KDM2A;nc|ENSG00000173120|Q9Y2K7-5|KDM2A	46.45678178249821	0.34452392205506005	5				NaN	NaN	0	NaN	2529	3170	5697
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5702	20.343	NaN	1659.8	30	0	213.71	0.106				-1	ETCRGPPL	8	53	465.22990921751665	928.4452655018333	2	465.22930908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_ETC(Carbamidomethyl (C))RGPPL_	ENST00000522332.1_1_8:22056536-22056896:+|nuORF;nc|ENSG00000168487|P13497-6|BMP1	40.5726180659479	0.6527593143185008	5				NaN	NaN	0	NaN	2530	3170	5697
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5703	20.345	NaN	1123.5	30	0	185.84	0.035	+			28533	NIKRFASIV	9	40	524.3204629121216	NaN	0	524.320068359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NIKRFASIV_	CASS4|p.D572N|1|0.04|ENSG00000087589|chr20:56452890-56452890|G/A|missense_variant	32.81241826257853	0.3119040447479903	5				NaN	NaN	0	NaN	2531	3170	5697
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5718	20.377	NaN	2343.5	30	0	684.94	0.214	+			37910	SPCSAACRW	9	46	490.70675074857087	979.3989485639418	2	490.70697021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SPCSAACRW_	DGKD|p.G855Vfs*48|1|0.29|ENSG00000077044|chr2:233457306-233457306|G/-|frameshift_variant	40.77816245573522	0.41113185337114944	5				NaN	NaN	0	NaN	2543	3173	5717
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5719	20.38	NaN	2288.6	30	0	516.75	0.106	+			45729	VACGSAHTL	9	48	458.2214638806532	NaN	0	458.2216796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_VAC(Carbamidomethyl (C))GSAHTL_	ENSG00000128731|ENST00000261609|HERC2;HERC2|p.N4304S|1|0.12|ENSG00000128731|chr15:28125085-28125085|T/C|missense_variant	85.35947970620816	0.05301898140525511	5				NaN	NaN	0	NaN	2544	3173	5717
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5720	20.382	NaN	11008	30	0	1213.4	0.106	+			976	AEKAYHEQL	9	78	544.7721252834439	1087.5296976336876	2	544.7735595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEKAYHEQL_	ENSG00000075886|ENST00000321253|TUBA3D;ENSG00000123416|ENST00000336023|TUBA1B;ENSG00000127824|ENST00000248437|TUBA4A;ENSG00000152086|ENST00000312988|TUBA3E;ENSG00000167552|ENST00000301071|TUBA1A;ENSG00000167553|ENST00000301072|TUBA1C;ENSG00000183785|ENST00000330423|TUBA8;ENSG00000198033|ENST00000400113|TUBA3C;ENST00000437364.2_1_1:47358067-47358181:+|nuORF;ENST00000530835.1_1_11:90015825-90016947:+|nuORF;nc|ENSG00000123416|P68363-2|TUBA1B;nc|ENSG00000127824|P68366-2|TUBA4A;nc|ENSG00000167552|Q71U36-2|TUBA1A;nc|ENSG00000183785|Q9NY65-2|TUBA8;nc|ENSG00000198033|P0DPH7-2|TUBA3C;TUBA1A|p.I276V|1|0.05|ENSG00000167552|chr12:49185540-49185540|T/C|missense_variant;TUBA3C|p.T361Rfs*18|1|0.17|ENSG00000198033|chr13:19174136-19174136|G/-|frameshift_variant;TUBA3D|p.G366Efs*13|1|0.17|ENSG00000075886|chr2:131482588-131482588|G/-|frameshift_variant;TUBA3D|p.V328Pfs*54|1|0.45|ENSG00000075886|chr2:131480665-131480666|-/CCCAAAGA|frameshift_variant	94.4091291819064	0.0524345700464502	5				NaN	NaN	0	NaN	2545	3173	5717
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5721	20.384	NaN	1163.5	30	0	81.132	0.106	+			8137	EAAAPAPIGEL	11	50	519.7783203125	NaN	0	519.7783203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EAAAPAPIGEL_	ENSG00000114779|ENST00000361143|ABHD14B;ENST00000487005.1_1_3:52003444-52008077:-|nuORF;nc|ENSG00000114779|Q96IU4-2|ABHD14B	31.529811441608018	0.4249010005043958	5				NaN	NaN	0	NaN	2546	3173	5717
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5722	20.386	NaN	2312.4	30	0	510.53	0.106	+			18285	IPMMTPSDIT	10	49	553.2667245404099	1104.5188961476197	2	553.2686157226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IPMMTPSDIT_	ENSG00000198010|ENST00000637795|DLGAP2;nc|ENSG00000198010|Q9P1A6-2|DLGAP2;nc|ENSG00000198010|Q9P1A6-3|DLGAP2;nc|ENSG00000198010|Q9P1A6|DLGAP2	44.116797842482775	0.5112108506279902	5				NaN	NaN	0	NaN	2547	3173	5717
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5723	20.388	NaN	1139.8	30	0	310.55	0.106	+			28183	NAPTVAAPT	9	38	421.2244559854841	840.4343590377682	2	421.2247314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NAPTVAAPT_	ENSG00000076344|ENST00000397770|RGS11;ENST00000477143.5_1_16:319270-321397:-|nuORF;nc|ENSG00000076344|O94810-2|RGS11;nc|ENSG00000076344|O94810-3|RGS11	27.882242232435846	0.5426732730940306	5				NaN	NaN	0	NaN	2548	3173	5717
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5724	20.39	NaN	870.18	30	0	141.06	0.036				-1	KGVPCEDKF	9	45	540.2620527182851	1078.50955250337	2	540.2623291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_KGVPC(Carbamidomethyl (C))EDKF_	REG1A|p.D151G|1|0.16|ENSG00000115386|chr2:79123166-79123166|A/G|missense_variant	29.14955571784316	0.5308295550522326	5				NaN	NaN	0	NaN	2549	3173	5717
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5737	20.417	NaN	9467.8	30	0	1253.6	0.214			+	30255	PTAAAAPAAAA	11	68	441.7377140778773	881.4608752225546	2	441.73760986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PTAAAAPAAAA_	REV__ENST00000423059.8_2_7:11676563-11871669:-|nuORF	58.78195531508484	0.3343278462358323	5				NaN	NaN	0	NaN	2559	3176	5736
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5738	20.421	NaN	9202.6	30	0	2953.4	0.106			+	-1	AERLDMPQL	9	43	363.51733303035155	1087.5301696912547	3	363.5171813964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_AERLDM(Oxidation (M))PQL_	REV__ENSG00000250782|ENST00000512227|TAF11L14	37.81151784470057	0.4459294069877048	5				NaN	NaN	0	NaN	2560	3176	5736
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5739	20.422	NaN	4525.4	30	0	988.89	0.106	+			8492	EASQYGRF	8	59	479.22476662512867	956.4349803170574	2	479.22491455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EASQYGRF_	THOC2|p.R1038Q|1|0.37|ENSG00000125676|chrX:123624614-123624614|C/T|missense_variant	42.47446043378293	0.6409579893742323	5				NaN	NaN	0	NaN	2561	3176	5736
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5740	20.424	NaN	6703.4	30	0	3953.6	0.106	+			6478	AVYLSTCKDSK	11	47	424.54791698075064	1270.621921542452	3	424.5486145019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_AVYLSTC(Carbamidomethyl (C))KDSK_	ENSG00000231925|ENST00000434618|TAPBP;nc|ENSG00000231925|O15533-3|TAPBP;nc|ENSG00000231925|O15533-4|TAPBP	46.45678178249821	0.46959456050452836	5				NaN	NaN	0	NaN	2562	3176	5736
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5741	20.426	NaN	1668.4	30	0	401.8	0.106			+	5595	AVAVLTEHV	9	33	469.76906877471595	937.5235846162319	2	469.7686767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVAVLTEHV_	REV__ENSG00000141873|ENST00000269740|SLC39A3	33.51558372728122	0.4900267029546261	5				NaN	NaN	0	NaN	2563	3176	5736
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5742	20.428	NaN	1144.8	30	0	219.68	0.033			+	41351	SVLWVGPV	8	40	428.7481384277344	NaN	0	428.7481384277344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVLWVGPV_	REV__ENST00000488292.1_1_9:35738625-35739104:-|nuORF	44.53106598305862	1.7418937515398478	5				NaN	NaN	0	NaN	2564	3176	5736
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5756	20.458	NaN	9198.6	30	0	2661.5	0.214	+			15409	GTYGLDSVKKK	11	44	399.2273915236332	1194.6603451710996	3	399.227294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTYGLDSVKKK_	ENSG00000087338|ENST00000282570|GMCL1	47.227680397652996	0.4590463137409202	5				NaN	NaN	0	NaN	2575	3179	5755
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5757	20.461	NaN	2177.3	30	0	149.08	0.106	+			16368	HENDVKTAL	9	65	513.764014426774	1025.513475920348	2	513.76416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HENDVKTAL_	ENSG00000165533|ENST00000380656|TTC8;nc|ENSG00000165533|Q8TAM2-3|TTC8;TTC8|p.K269Rfs*38|1|0.08|ENSG00000165533|chr14:88857236-88857237|-/GGATGAATAG|frameshift_variant	48.601550744091256	0.3193666407755445	5				NaN	NaN	0	NaN	2576	3179	5755
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5758	20.463	NaN	11265	30	0	10026	0.106			+	-1	GACVLGWKMI	10	30	378.86491773804437	1133.572923814333	3	378.8647155761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_GAC(Carbamidomethyl (C))VLGWKMI_	REV__ENSG00000143158|ENST00000271373|MPC2	12.811709888998246	0.7513471912541434	5				NaN	NaN	0	NaN	2577	3179	5755
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5759	20.465	NaN	2356.4	30	0	467.5	0.106	+			8248	EAFRGVHRY	9	47	567.7936724853184	NaN	0	567.7936401367188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EAFRGVHRY_	ENSG00000213719|ENST00000375784|CLIC1	84.9155231211612	0.05454024040755679	5				NaN	NaN	0	NaN	2578	3179	5755
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5760	20.467	NaN	1288	30	0	527.02	0.106	+			48526	VTNPEKRIP	9	47	527.3067098588712	NaN	0	527.3071899414062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTNPEKRIP_	ENSG00000213079|ENST00000367178|SCAF8;nc|ENSG00000213079|Q9UPN6-2|SCAF8	42.396135135203025	0.2590952873412954	5				NaN	NaN	0	NaN	2579	3179	5755
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5761	20.468	NaN	1173.9	30	0	271	0.036	+			39318	STATSSTLVSK	11	53	541.2913249157433	NaN	0	541.2914428710938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STATSSTLVSK_	ENST00000332782.6_1_12:57640633-57642538:-|nuORF	51.52775601994872	0.30434581687306933	5				NaN	NaN	0	NaN	2580	3179	5755
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5777	20.502	NaN	9014.6	30	0	2042.4	0.215	+			14328	GSYSKAFAR	9	66	493.75603071731484	985.4975085014297	2	493.756103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSYSKAFAR_	ENSG00000005175|ENST00000005386|RPAP3;nc|ENSG00000005175|Q9H6T3-2|RPAP3;nc|ENSG00000005175|Q9H6T3-3|RPAP3	148.6902309647307	0.00717441509122429	5				NaN	NaN	0	NaN	2593	3182	5776
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5778	20.505	NaN	6494.6	30	0	2581.1	0.106	+			36420	SETTAAHSL	9	62	458.72196729608254	NaN	0	458.7219543457031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SETTAAHSL_	ENSG00000119408|ENST00000320246|NEK6;nc|ENSG00000119408|Q9HC98-2|NEK6;nc|ENSG00000119408|Q9HC98-3|NEK6;nc|ENSG00000119408|Q9HC98-4|NEK6	93.19546047674547	0.03515475374905802	5				NaN	NaN	0	NaN	2594	3182	5776
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5779	20.507	NaN	1177.6	30	0	212.86	0.106				-1	GAERNVCLP	9	49	508.2510887869597	1014.4876246407194	2	507.78228759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_GAERNVC(Carbamidomethyl (C))LP_	ENST00000381180.8_2_X:2609988-2610174:+|nuORF	60.97194046774394	0.20551255781574032	5				NaN	NaN	0	NaN	2595	3182	5776
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5780	20.509	NaN	2538	30	0	819.15	0.106	+			31330	QIQTVYKK	8	54	504.2975311917768	1006.5805094503536	2	504.2979431152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QIQTVYKK_	tr|U7STC5|U7STC5_FUSNUThreonine/serineexporter-likeN-terminaldomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01363PE=3SV=1	84.9155231211612	0.2928622555056503	5				NaN	NaN	0	NaN	2596	3182	5776
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5781	20.511	NaN	2147.1	30	0	383.64	0.106	+			13393	GLEARPEVV	9	57	485.2719035196559	968.5292541061118	2	485.27191162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GLEARPEVV_	ENSG00000062038|ENST00000264012|CDH3;ENST00000542274.5_1_16:68679206-68732300:+|nuORF;ENST00000567674.1_1_16:68721613-68732300:+|nuORF;nc|ENSG00000062038|P22223-2|CDH3	39.252832667884924	0.4290233611298554	5				NaN	NaN	0	NaN	2597	3182	5776
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5782	20.513	NaN	1039.9	30	0	201.79	0.036			+	33088	RELAARQGSL	10	54	550.8122787240658	NaN	0	550.81201171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RELAARQGSL_	REV__ENSG00000159337|ENST00000290472|PLA2G4D;REV__nc|ENSG00000159337|Q86XP0-2|PLA2G4D	36.446750945000026	0.3805027428805705	5				NaN	NaN	0	NaN	2598	3182	5776
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5783	20.513	NaN	2227.1	30	0	226.55	0.14			+	40793	SVDQGWAI	8	52	438.21440923676954	NaN	0	438.2144775390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVDQGWAI_	REV__nc|ENSG00000214655|A7E2V4-2|ZSWIM8	42.396135135203025	1.7418937515398478	5				NaN	NaN	0	NaN	2599	3182	5776
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5797	20.545	NaN	6127.7	30	0	1732.2	0.214	+			5786	AVGTLQEAK	9	56	458.75831274715176	915.5020725611035	2	458.75848388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVGTLQEAK_	ENSG00000168453|ENST00000381418|HR;nc|ENSG00000168453|O43593-2|HR	72.87924865735499	0.12833875048249987	5				NaN	NaN	0	NaN	2610	3185	5796
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5798	20.548	NaN	3786.6	30	0	702.01	0.106	+			44134	TQATIYVHK	9	61	354.19768966324546	1059.5712395899363	3	354.1975402832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TQATIYVHK_	ENSG00000090686|ENST00000308271|USP48;nc|ENSG00000090686|Q86UV5-2|USP48;nc|ENSG00000090686|Q86UV5-5|USP48;nc|ENSG00000090686|Q86UV5-8|USP48;USP48|p.L982Ffs*9|1|0.08|ENSG00000090686|chr1:21690037-21690038|-/GG|frameshift_variant	32.81241826257853	0.4965981579233955	5				NaN	NaN	0	NaN	2611	3185	5796
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5799	20.55	NaN	1624.5	30	0	270.88	0.106			+	17293	IADEFQAQL	9	52	517.7598123953576	1033.505071857515	2	517.76025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IADEFQAQL_	REV__ENSG00000226321|ENST00000690015|CROCC2	42.396135135203025	0.392153681582562	5				NaN	NaN	0	NaN	2612	3185	5796
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5800	20.552	NaN	1669	30	0	502.51	0.106			+	33313	RGRVCEFCF	9	40	558.7582238820702	NaN	0	558.7586669921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RGRVCEFCF_	REV__ENSG00000103549|ENST00000324685|RNF40;REV__nc|ENSG00000103549|O75150-4|RNF40;REV__RNF40|p.V966I|1|0.42|ENSG00000103549|chr16:30774004-30774004|G/A|missense_variant	16.473147378115264	0.38122769658151995	5				NaN	NaN	0	NaN	2613	3185	5796
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5801	20.554	NaN	1104.6	30	0	102.66	0.034			+	9021	EGDARWVL	8	50	473.24395751953125	NaN	0	473.24395751953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EGDARWVL_	REV__ENSG00000115183|ENST00000263635|TANC1;REV__nc|ENSG00000115183|Q9C0D5-2|TANC1	40.5726180659479	1.7418937515398478	5				NaN	NaN	0	NaN	2614	3185	5796
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5813	20.579	NaN	18337	30	0	6710.1	0.214	+			15170	GTSGLSSLK	9	59	425.2372825968563	848.4600122605126	2	425.2372741699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTSGLSSLK_	ENSG00000173064|ENST00000682272|HECTD4;HECTD4|p.A3108Gfs*4|1|0.12|ENSG00000173064|chr12:112185242-112185243|CC/-|frameshift_variant;HECTD4|p.A3108Rfs*26|1|0.37|ENSG00000173064|chr12:112185242-112185242|C/-|frameshift_variant;HECTD4|p.A4187Pfs*44|1|0.07|ENSG00000173064|chr12:112163201-112163201|C/-|frameshift_variant;HECTD4|p.L1880Pfs*22|1|0.19|ENSG00000173064|chr12:112231674-112231675|-/TAGGA|frameshift_variant;nc|ENSG00000173064|Q9Y4D8-2|HECTD4;nc|ENSG00000173064|Q9Y4D8-3|HECTD4;nc|ENSG00000173064|Q9Y4D8-4|HECTD4;nc|ENSG00000173064|Q9Y4D8-5|HECTD4;nc|ENSG00000173064|Q9Y4D8|HECTD4	134.81075121484326	0.012914550297035062	5				NaN	NaN	0	NaN	2623	3188	5812
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5814	20.583	NaN	14698	30	0	10543	0.106	+			45884	VAPEEHPV	8	58	439.22442589411526	876.4342988550305	2	439.2241516113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VAPEEHPV_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;POTEF|p.L804P|1|0.35|ENSG00000196604|chr2:130075061-130075061|A/G|missense_variant	62.97842346883844	0.4722955155785405	5				NaN	NaN	0	NaN	2624	3188	5812
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5815	20.585	NaN	3735.8	30	0	1466.9	0.106			+	28478	NGEREHGLQG	10	59	548.7604758653669	NaN	0	548.7603759765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NGEREHGLQG_	REV__ENSG00000138641|ENST00000402738|HERC3;REV__nc|ENSG00000287542|Q15034-2|HERC3	41.42661286455405	0.3598046802465243	5				NaN	NaN	0	NaN	2625	3188	5812
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5816	20.587	NaN	2007.2	30	0	832.36	0.106			+	50612	YDWCCPLG	8	47	478.685323417429	955.356093901658	2	478.685302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YDWCCPLG_	REV__ENSG00000170634|ENST00000607452|ACYP2	20.481830146152948	0.8005983782650069	5				NaN	NaN	0	NaN	2626	3188	5812
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5817	20.589	NaN	7517.9	30	0	588.15	0.106	+			34317	RTMSEAALVRK	11	66	421.23927918982554	1260.6960081696766	3	421.5733337402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RTMSEAALVRK_	ENSG00000169435|ENST00000307439|RASSF6;nc|ENSG00000169435|Q6ZTQ3-3|RASSF6;nc|ENSG00000169435|Q6ZTQ3-4|RASSF6;nc|ENSG00000169435|Q6ZTQ3|RASSF6;RASSF6|p.K253Nfs*25|1|0.16|ENSG00000169435|chr4:73582195-73582195|T/-|frameshift_variant	92.94320115499777	0.08672601920733168	5				NaN	NaN	0	NaN	2627	3188	5812
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5818	20.59	NaN	2981.6	30	0	710.99	0.037				-1	SSESVRSCVK	10	34	380.18892716234143	1137.5449520872244	3	380.1888732910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_SSESVRSC(Carbamidomethyl (C))VK_	ENST00000592072.1_1_17:40939341-40946077:+|nuORF;WNK4|p.R467Afs*194|2|0.56|ENSG00000126562|chr17:42785399-42785399|G/-|frameshift_variant	29.170058357718403	0.6416167986984785	5				NaN	NaN	0	NaN	2628	3188	5812
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5819	20.591	NaN	2386.1	30	0	430.32	0.14	+			22132	KSPEKDVPM	9	61	515.7652756629244	1029.5159983926487	2	515.7657470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KSPEKDVPM_	ENSG00000065000|ENST00000643116|AP3D1;nc|ENSG00000065000|O14617-2|AP3D1;nc|ENSG00000065000|O14617-3|AP3D1;nc|ENSG00000065000|O14617|AP3D1	104.0567914643314	0.03506238181059741	5				NaN	NaN	0	NaN	2629	3188	5812
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5833	20.622	NaN	2925.1	30	0	579.29	0.214			+	29004	NSNSLTVACP	10	58	503.236868889631	1004.459184846062	2	503.2370910644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NSNSLTVACP_	REV__ENSG00000198718|ENST00000361462|TOGARAM1;REV__ENST00000555607.1_1_14:45431624-45475488:+|nuORF;REV__ENST00000555945.1_1_14:45431624-45465140:+|nuORF;REV__nc|ENSG00000198718|Q9Y4F4-2|TOGARAM1;REV__nc|ENSG00000198718|Q9Y4F4-3|TOGARAM1;REV__nc|ENSG00000198718|Q9Y4F4|TOGARAM1	36.446750945000026	0.5818864909973037	5				NaN	NaN	0	NaN	2640	3191	5832
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5834	20.626	NaN	5155.9	30	0	846.59	0.106	+			27750	MQPLKGSLMD	10	65	568.280013938177	1134.545474943154	2	568.2798461914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_M(Oxidation (M))QPLKGSLMD_	ENST00000321599.8_2_3:49762771-49762981:-|nuORF	65.46538089061403	0.31613324008013116	5				NaN	NaN	0	NaN	2641	3191	5832
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5835	20.628	NaN	892.78	30	0	81.66	0.106	+			36326	SESPTRSLS	9	49	482.240478515625	NaN	0	482.240478515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SESPTRSLS_	ENSG00000141750|ENST00000333461|STAC2;nc|ENSG00000141750|Q6ZMT1-2|STAC2	49.44154591367651	0.21054156626303966	5				NaN	NaN	0	NaN	2642	3191	5832
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5836	20.63	NaN	2896.7	30	0	247.07	0.106	+			48822	VVAQTKAISG	10	58	487.28754228923856	972.5605316452771	2	487.2870178222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVAQTKAISG_	ENSG00000275395|ENST00000616721|FCGBP;FCGBP-ACSS2|1|fusion;nc|ENSG00000275395|Q9Y6R7|FCGBP	58.22992032128504	0.38193887838457763	5				NaN	NaN	0	NaN	2643	3191	5832
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5837	20.632	NaN	2155.9	30	0	392.38	0.106	+			43734	TLAGLVLG	8	49	372.2361145019531	NaN	0	372.2361145019531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TLAGLVLG_	ENSG00000083782|ENST00000261172|EPYC	20.481830146152948	1.741893751539848	5				NaN	NaN	0	NaN	2644	3191	5832
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5838	20.633	NaN	698.13	30	0	61.962	0.106	+			29461	PCPGRPAPW	9	42	490.7427062988281	NaN	0	490.7427062988281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PCPGRPAPW_	ENST00000375153.7_1_1:19638904-19639291:+|nuORF	33.51558372728122	0.30835390848773375	5				NaN	NaN	0	NaN	2645	3191	5832
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5839	20.635	NaN	659.72	30	0	75.969	0.034			+	-1	SVRCAMAL	8	40	462.2274169921875	NaN	0	462.2274169921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C),Oxidation (M)	_SVRC(Carbamidomethyl (C))AM(Oxidation (M))AL_	REV__ENST00000376033.2_1_6:31590675-31591592:+|nuORF	31.954861631926434	1.7418937515398478	5				NaN	NaN	0	NaN	2646	3191	5832
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5856	20.67	NaN	143870	30	0	33168	0.195	+			5531	AVAIKAMAK	9	97	451.77787506128226	901.5411971893645	2	451.7780456542969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVAIKAMAK_	EIF5A|p.A145P|1|0.15|ENSG00000132507|chr17:7311608-7311608|G/C|missense_variant;ENSG00000132507|ENST00000336458|EIF5A;ENSG00000253626|ENST00000520547|EIF5AL1;nc|ENSG00000132507|P63241-2|EIF5A	143.10689835833298	0.00902249513149409	5				NaN	NaN	0	NaN	2660	3194	5855
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5857	20.674	NaN	16650	30	0	2501.9	0.106				-1	 	0	64	366.7253560825922	731.4361592319844	2	366.7253723144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2661	3194	5855
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5858	20.676	NaN	2314.1	30	0	265.45	0.106	+			20887	KIQETFAQK	9	69	546.8059159047681	1091.597278876336	2	546.8062744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KIQETFAQK_	ENST00000519940.5_1_19:48735037-48741646:-|nuORF	101.45984612302182	0.0377122763612125	5				NaN	NaN	0	NaN	2662	3194	5855
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5859	20.677	NaN	1795.9	30	0	340.43	0.106	+			19293	KAFVGAFKK	9	55	498.3046212450467	994.5946895568934	2	498.3053283691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KAFVGAFKK_	ENSG00000160796|ENST00000450053|NBEAL2;NBEAL2|p.C1705Vfs*45|1|0.24|ENSG00000160796|chr3:47002246-47002246|T/-|frameshift_variant;NBEAL2|p.P1303Lfs*63|1|0.21|ENSG00000160796|chr3:47000002-47000002|C/-|frameshift_variant;NBEAL2|p.Y1346Tfs*20|1|0.44|ENSG00000160796|chr3:47000132-47000132|T/-|frameshift_variant;nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2;nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2	41.42661286455405	0.403525789677298	5				NaN	NaN	0	NaN	2663	3194	5855
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5860	20.679	NaN	2136.3	30	0	364.57	0.106			+	30653	QAVAAVHIK	9	52	468.78479207375335	935.5550312143067	2	468.7845458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QAVAAVHIK_	REV__ENSG00000162971|ENST00000354611|TYW5;REV__ENST00000493181.1_1_2:200812997-200820193:-|nuORF	29.14955571784316	0.5308295550522326	5				NaN	NaN	0	NaN	2664	3194	5855
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5861	20.681	NaN	3842.7	30	0	885.63	0.106			+	3855	ATALVTSAAAA	11	57	473.7636812112903	945.5128094893806	2	473.7637023925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATALVTSAAAA_	REV__ENSG00000104415|ENST00000250160|CCN4;REV__nc|ENSG00000104415|O95388-2|CCN4;REV__nc|ENSG00000104415|O95388-3|CCN4;REV__nc|ENSG00000104415|O95388-4|CCN4	62.107414245175825	0.30464354921554965	5				NaN	NaN	0	NaN	2665	3194	5855
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5862	20.683	NaN	4176.9	30	0	563.87	0.035	+			9466	EKPRDKSY	8	61	511.76801248366905	NaN	0	511.7681579589844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EKPRDKSY_	ENSG00000079150|ENST00000424785|FKBP7;nc|ENSG00000079150|Q9Y680-3|FKBP7	44.116797842482775	1.7418937515398478	5				NaN	NaN	0	NaN	2666	3194	5855
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5879	20.718	NaN	33574	30	0	4626.8	0.214	+			47520	VQNGKHFKF	9	80	368.8697271945437	1103.5873521838312	3	368.8697204589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VQNGKHFKF_	ENSG00000163586|ENST00000295834|FABP1	71.87747018426188	0.13267044672804276	5				NaN	NaN	0	NaN	2680	3197	5878
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5880	20.722	NaN	4164.7	30	0	846.44	0.106	+			4810	ATNTSAPDLK	10	65	509.2639906929004	1016.5134284526008	2	509.2641296386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATNTSAPDLK_	ENSG00000047849|ENST00000683076|MAP4;MAP4|p.T960Qfs*35|1|0.3|ENSG00000047849|chr3:47869309-47869309|T/-|frameshift_variant;MAP4|p.V999*|1|0.25|ENSG00000047849|chr3:47867318-47867318|T/-|frameshift_variant;nc|ENSG00000047849|P27816-2|MAP4;nc|ENSG00000047849|P27816-4|MAP4;nc|ENSG00000047849|P27816-5|MAP4;nc|ENSG00000047849|P27816-6|MAP4;nc|ENSG00000047849|P27816|MAP4	112.2953585152457	0.0411829880542106	5				NaN	NaN	0	NaN	2681	3197	5878
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5881	20.724	NaN	4087	30	0	796.13	0.106			+	4523	ATKPEVASIRR	11	42	409.91035293297773	1226.7092293991332	3	409.9103088378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATKPEVASIRR_	REV__ENSG00000136153|ENST00000377534|LMO7;REV__ENST00000563635.5_1_13:76195947-76378681:+|nuORF;REV__LMO7|p.D282Mfs*3|1|0.16|ENSG00000136153|chr13:75807821-75807821|A/-|frameshift_variant;REV__nc|ENSG00000136153|Q8WWI1-2|LMO7;REV__nc|ENSG00000136153|Q8WWI1-3|LMO7;REV__nc|ENSG00000136153|Q8WWI1-4|LMO7;REV__nc|ENSG00000136153|Q8WWI1-5|LMO7;REV__nc|ENSG00000136153|Q8WWI1|LMO7	32.03412808689991	0.6537793186749145	5				NaN	NaN	0	NaN	2682	3197	5878
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5882	20.725	NaN	3718.6	30	0	496.49	0.106	+			48584	VTQNGGLYK	9	58	490.2637708663799	978.5129887995598	2	490.2637023925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTQNGGLYK_	ENSG00000100596|ENST00000216484|SPTLC2	96.0336014099291	0.047854655524928534	5				NaN	NaN	0	NaN	2683	3197	5878
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5883	20.727	NaN	2325.3	30	0	443.21	0.106	+			33175	REVAGHTEQL	10	51	570.2940559512181	NaN	0	570.2942504882812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_REVAGHTEQL_	CON__P08727;ENSG00000171345|ENST00000361566|KRT19;ENST00000468880.1_1_17:39680334-39681232:-|nuORF;ENST00000471565.2_1_17:39680334-39680852:-|nuORF	52.167168403610894	0.2919013263483103	5				NaN	NaN	0	NaN	2684	3197	5878
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5884	20.729	NaN	12266	30	0	3592.1	0.038	+			51046	YLDLSSNKLR	10	52	403.55919116214255	1207.6557440866277	3	403.55914306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YLDLSSNKLR_	ENSG00000138767|ENST00000504123|CNOT6L;ENST00000506166.1_1_4:78663390-78740391:-|nuORF;nc|ENSG00000138767|Q96LI5-2|CNOT6L	29.14955571784316	0.6417842315402807	5				NaN	NaN	0	NaN	2685	3197	5878
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5885	20.73	NaN	1553.8	30	0	340.75	0.141	+			40135	STQDTTAFSK	10	56	543.2591179500332	1084.5036829668663	2	543.259521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STQDTTAFSK_	ENSG00000145113|ENST00000463781|MUC4;MUC4|p.L3985Ffs*274|1|0.3|ENSG00000145113|chr3:195779627-195779627|G/-|frameshift_variant;MUC4|p.N4902Tfs*8|1|0.37|ENSG00000145113|chr3:195761027-195761027|T/-|frameshift_variant;nc|ENSG00000145113|Q99102-10|MUC4;nc|ENSG00000145113|Q99102-11|MUC4;nc|ENSG00000145113|Q99102-15|MUC4;nc|ENSG00000145113|Q99102-16|MUC4;nc|ENSG00000145113|Q99102-17|MUC4;nc|ENSG00000145113|Q99102-2|MUC4;nc|ENSG00000145113|Q99102-3|MUC4;nc|ENSG00000145113|Q99102-5|MUC4;nc|ENSG00000145113|Q99102-7|MUC4;nc|ENSG00000145113|Q99102-8|MUC4;nc|ENSG00000145113|Q99102-9|MUC4	68.62578634547417	0.2885473079336931	5				NaN	NaN	0	NaN	2686	3197	5878
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5899	20.761	NaN	11375	30	0	2270.1	0.214			+	-1	AVSSCVMK	8	68	449.2118099968255	896.409067060451	2	449.2117614746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_AVSSC(Carbamidomethyl (C))VM(Oxidation (M))K_	REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-10|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-13|TTN;REV__nc|ENSG00000155657|Q8WZ42-2|TTN;REV__nc|ENSG00000155657|Q8WZ42-3|TTN;REV__nc|ENSG00000155657|Q8WZ42-4|TTN;REV__nc|ENSG00000155657|Q8WZ42-5|TTN;REV__nc|ENSG00000155657|Q8WZ42-7|TTN;REV__nc|ENSG00000155657|Q8WZ42-8|TTN;REV__nc|ENSG00000155657|Q8WZ42-9|TTN;REV__nc|ENSG00000155657|Q8WZ42|TTN;REV__TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;REV__TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;REV__TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;REV__TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;REV__TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;REV__TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant	71.29570347882199	0.39610197767395533	5				NaN	NaN	0	NaN	2697	3200	5898
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5900	20.765	NaN	4205.5	30	0	410.68	0.106	+			21728	KQLEDGRTL	9	63	530.2933169328048	1058.5720809324096	2	530.2939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KQLEDGRTL_	ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000399822.2_1_9:22012279-22012411:+|nuORF;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;UBB|p.D191Tfs*35|2|0.18|ENSG00000170315|chr17:16382471-16382471|C/-|frameshift_variant;UBB|p.D191Tfs*35|2|0.18|ENSG00000170315|chr17:16382471-16382471|C/-|frameshift_variant	82.7504851949679	0.08565546331141553	5				NaN	NaN	0	NaN	2698	3200	5898
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5901	20.767	NaN	3412.3	30	0	1173.4	0.106				-1	 	0	35	374.56060115966113	1120.6599740791835	3	374.5604248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2699	3200	5898
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5902	20.769	NaN	1983.9	30	0	482.09	0.106				-1	LAMTIWILKVM	11	44	445.5918321366778	1333.7536670102334	3	445.5915832519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_LAMTIWILKVM(Oxidation (M))_	ENSG00000170624|ENST00000337851|SGCD;ENSG00000185053|ENST00000382080|SGCZ;nc|ENSG00000170624|Q92629-3|SGCD;nc|ENSG00000170624|Q92629|SGCD;nc|ENSG00000185053|Q96LD1|SGCZ	26.063383197487333	0.7164075632144343	5				NaN	NaN	0	NaN	2700	3200	5898
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5903	20.77	NaN	2591.5	30	0	501.51	0.106			+	7946	DSLQLQRA	8	58	465.753372590854	929.492192248508	2	465.7531433105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DSLQLQRA_	REV__ENSG00000176454|ENST00000314891|LPCAT4;REV__ENST00000563240.1_1_15:34653546-34654988:-|nuORF;REV__ENST00000563748.5_1_15:34652212-34654781:-|nuORF	51.33545320467046	0.5859736979383976	5				NaN	NaN	0	NaN	2701	3200	5898
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5904	20.772	NaN	2825	30	0	418.74	0.037	+			47670	VSDPSSPQYGK	11	57	582.7800952292156	1163.545637525231	2	582.779541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VSDPSSPQYGK_	ENSG00000166340|ENST00000299427|TPP1;ENST00000428886.6_1_11:6638445-6640631:-|nuORF;TPP1|p.I484Sfs*4|1|0.24|ENSG00000166340|chr11:6614968-6614968|C/-|frameshift_variant	125.68205650279488	0.009258456973060042	5				NaN	NaN	0	NaN	2702	3200	5898
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5905	20.773	NaN	1922.6	30	0	290.02	0.141			+	-1	CSPALGCGL	9	52	439.1988510211037	876.3831491090074	2	439.1985168457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_CSPALGC(Carbamidomethyl (C))GL_	REV__ENST00000404054.3_1_4:1741140-1741506:+|nuORF;REV__ENST00000470808.1_1_4:1741140-1742845:+|nuORF	40.5726180659479	0.4135428067754104	5				NaN	NaN	0	NaN	2703	3200	5898
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5918	20.802	NaN	20158	30	0	5570.4	0.215	+			5351	ATVTPSPVK	9	71	450.2632938475522	898.5120347619044	2	450.2632141113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATVTPSPVK_	ENSG00000069275|ENST00000367142|NUCKS1;nc|ENSG00000069275|Q9H1E3-2|NUCKS1	72.87924865735499	0.12833875048249987	5				NaN	NaN	0	NaN	2713	3203	5917
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5919	20.805	NaN	4990.5	30	0	1724.9	0.106	+			38910	SSPPSLPAPS	10	54	470.2424634566088	938.4703739800176	2	470.24249267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSPPSLPAPS_	ENST00000521594.1_1_5:150076301-150080167:-|nuORF	47.657333605630114	0.47858658696240314	5				NaN	NaN	0	NaN	2714	3203	5917
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5920	20.807	NaN	76636	30	0	45009	0.106				-1	 	0	70	384.77209604529315	767.5296391573863	2	384.77197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2715	3203	5917
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5921	20.809	NaN	2420.2	30	0	359.11	0.106			+	29478	PCRPLPMPI	9	54	512.2758911884358	1022.5372294436717	2	512.2770385742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PCRPLPMPI_	REV__HYDIN|p.V3416Gfs*64|1|0.15|ENSG00000157423|chr16:70879725-70879726|-/ACTCC|frameshift_variant	58.78195531508484	0.22376836668196862	5				NaN	NaN	0	NaN	2716	3203	5917
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5922	20.811	NaN	1546	30	0	255.63	0.106	+			37179	SIYKPGQTVK	10	56	560.8216599372709	1119.6287669413416	2	560.8221435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SIYKPGQTVK_	ENSG00000175899|ENST00000318602|A2M	70.8162118820467	0.27065172005956	5				NaN	NaN	0	NaN	2717	3203	5917
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5923	20.813	NaN	20891	30	0	2862.9	0.036	+			6076	AVNAHSNILK	10	76	533.8035135573518	1065.5924741815036	2	534.305419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AVNAHSNILK_	ENSG00000132305|ENST00000410111|IMMT;ENST00000409258.2_1_2:86386442-86398424:-|nuORF;ENST00000435590.1_1_21:46097057-46097849:-|nuORF;ENST00000474969.5_1_2:86385703-86422514:-|nuORF;ENST00000490238.5_1_2:86389097-86393741:-|nuORF;nc|ENSG00000132305|Q16891-2|IMMT;nc|ENSG00000132305|Q16891-3|IMMT;nc|ENSG00000132305|Q16891-4|IMMT	77.53327743719008	0.21577387331637743	5				NaN	NaN	0	NaN	2718	3203	5917
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5924	20.813	NaN	1865.9	30	0	790.34	0.139	+			47653	VSCRSPGL	8	38	409.7127437453357	817.4109345574714	2	409.71295166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VSCRSPGL_	ENSG00000074964|ENST00000361221|ARHGEF10L;ENST00000469726.5_1_1:17942561-18023872:+|nuORF;nc|ENSG00000074964|Q9HCE6-2|ARHGEF10L;nc|ENSG00000074964|Q9HCE6-3|ARHGEF10L;nc|ENSG00000074964|Q9HCE6-4|ARHGEF10L;nc|ENSG00000074964|Q9HCE6-5|ARHGEF10L	33.51558372728122	0.7005509609380386	5				NaN	NaN	0	NaN	2719	3203	5917
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5942	20.852	NaN	46740	30	0	20105	0.214	+			6077	AVNAHSNILK	10	77	356.2048885668004	1065.5928363006012	3	356.20489501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVNAHSNILK_	ENSG00000132305|ENST00000410111|IMMT;ENST00000409258.2_1_2:86386442-86398424:-|nuORF;ENST00000435590.1_1_21:46097057-46097849:-|nuORF;ENST00000474969.5_1_2:86385703-86422514:-|nuORF;ENST00000490238.5_1_2:86389097-86393741:-|nuORF;nc|ENSG00000132305|Q16891-2|IMMT;nc|ENSG00000132305|Q16891-3|IMMT;nc|ENSG00000132305|Q16891-4|IMMT	51.19269402634007	0.44601001148513897	5				NaN	NaN	0	NaN	2734	3206	5941
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5943	20.856	NaN	9518.6	30	0	2154.5	0.106	+			16142	HEAEGHIVTC	10	72	548.2477476082753	1094.4809422833505	2	548.2482299804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HEAEGHIVTC_	ENSG00000100028|ENST00000215829|SNRPD3;ENST00000468770.1_1_22:24953642-24953888:+|nuORF;nc|ENSG00000286070|P62318-2|SNRPD3	77.31757898189308	0.2175361111083648	5				NaN	NaN	0	NaN	2735	3206	5941
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5944	20.858	NaN	21542	30	0	9002.6	0.106			+	3039	ASFFLNLVQ	9	37	346.85736684972125	NaN	0	346.85736083984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASFFLNLVQ_	REV__ENSG00000134538|ENST00000256958|SLCO1B1	26.69291269510374	0.34280015626154364	5				NaN	NaN	0	NaN	2736	3206	5941
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5945	20.859	NaN	8495.2	30	0	857.16	0.106	+			36084	SEKDTKQIL	9	68	531.2951269665252	1060.5757009998504	2	531.2957763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SEKDTKQIL_	ENSG00000183207|ENST00000595090|RUVBL2;ENST00000596247.5_1_19:49507512-49519096:+|nuORF;nc|ENSG00000183207|Q9Y230-2|RUVBL2	109.82975700811294	0.02917171107062681	5				NaN	NaN	0	NaN	2737	3206	5941
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5946	20.861	NaN	2440.5	30	0	917.82	0.106	+			20552	KFQGSVTLK	9	56	504.2975311917768	1006.5805094503536	2	504.29779052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KFQGSVTLK_	ZNF25|p.P7S|1|0.12|ENSG00000175395|chr10:37957543-37957543|G/A|missense_variant	64.20726635412375	0.17854274437659667	5				NaN	NaN	0	NaN	2738	3206	5941
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5947	20.863	NaN	2775.6	30	0	308.37	0.033	+			11144	FGGLGSKSK	9	58	440.7480703324965	879.4815877317931	2	440.74774169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FGGLGSKSK_	ENSG00000124942|ENST00000378024|AHNAK	87.69643885390035	0.07135982304947239	5				NaN	NaN	0	NaN	2739	3206	5941
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5948	20.864	NaN	1035	30	0	383.25	0.144			+	10795	FAIEEQLSEVK	11	49	646.8385009765625	NaN	0	646.8385009765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FAIEEQLSEVK_	REV__ENSG00000026025|ENST00000544301|VIM;REV__ENST00000421459.2_2_10:17272631-17276850:+|nuORF	38.714083909724	0.3928837412686107	5				NaN	NaN	0	NaN	2740	3206	5941
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5966	20.903	NaN	4166.8	30	0	925.73	0.215	+			39314	STATATVSVGK	11	65	511.27975551646875	1020.5449580997375	2	511.2799987792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STATATVSVGK_	ENSG00000261150|ENST00000615648|EPPK1;EPPK1|p.G2015Vfs*36|2|0.33|ENSG00000261150|chr8:143867210-143867210|C/-|frameshift_variant;EPPK1|p.Q829Rfs*8|1|0.05|ENSG00000261150|chr8:143870770-143870770|C/-|frameshift_variant;EPPK1|p.Y695Ifs*68|1|0.36|ENSG00000261150|chr8:143871171-143871172|-/T|frameshift_variant	109.38876744936951	0.041277168889090256	5				NaN	NaN	0	NaN	2755	3209	5965
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5967	20.907	NaN	2161.3	30	0	251.34	0.106	+			49415	VVVASTVQK	9	56	465.78404609421153	NaN	0	465.78411865234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVVASTVQK_	ENSG00000117139|ENST00000367265|KDM5B;nc|ENSG00000117139|Q9UGL1-2|KDM5B	42.396135135203025	0.2590952873412954	5				NaN	NaN	0	NaN	2756	3209	5965
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5968	20.908	NaN	2266.1	30	0	1076.3	0.106			+	24521	LGKSTEVPG	9	42	444.24532204123517	886.4760911492704	2	444.2450256347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LGKSTEVPG_	REV__ENSG00000178685|ENST00000313028|PARP10;REV__PARP10|p.N936Qfs*6|1|0.45|ENSG00000178685|chr8:143977756-143977757|-/G|frameshift_variant	35.61828744233558	0.47037581924408073	5				NaN	NaN	0	NaN	2757	3209	5965
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5969	20.91	NaN	1799.6	30	0	133.1	0.106			+	30218	PSRWVEAR	8	62	500.77111291235286	NaN	0	500.77105712890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PSRWVEAR_	REV__ENST00000229329.6_1_12:22199202-22199379:+|nuORF	41.42661286455405	1.7418937515398478	5				NaN	NaN	0	NaN	2758	3209	5965
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5970	20.912	NaN	918.37	30	0	89.997	0.106			+	30288	PTKKNRGCK	9	46	516.2906494140625	NaN	0	516.2906494140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PTKKNRGCK_	REV__ENSG00000146477|ENST00000275300|SLC22A3	26.69291269510374	0.34280015626154364	5				NaN	NaN	0	NaN	2759	3209	5965
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5971	20.914	NaN	849	30	0	123.23	0.034	+			29442	PCILFPAR	8	42	458.7587663269276	915.5029797206553	2	458.758056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PCILFPAR_	ENST00000501520.1_1_16:28303156-28303378:-|nuORF	39.021493756699265	0.6623843612266921	5				NaN	NaN	0	NaN	2760	3209	5965
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5979	20.932	NaN	3587.8	30	0	710.78	0.214	+			4798	ATNNMNLSR	9	65	510.74825121186876	1019.4819494905375	2	510.748291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATNNMNLSR_	ENSG00000092148|ENST00000399332|HECTD1;ENST00000556004.1_1_14:31596982-31597923:-|nuORF;HECTD1|p.F2271Lfs*13|1|0.16|ENSG00000092148|chr14:31107059-31107059|A/-|frameshift_variant;HECTD1|p.I2041Lfs*27|1|0.36|ENSG00000092148|chr14:31113133-31113133|T/-|frameshift_variant;HECTD1|p.N1559H|1|0.32|ENSG00000092148|chr14:31128696-31128696|T/G|missense_variant	56.632244143249146	0.24168844994051353	5				NaN	NaN	0	NaN	2765	3212	5978
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5980	20.936	NaN	1462.8	30	0	416.79	0.106			+	29933	PLYHPMPA	8	44	463.2347747888476	924.4549966444952	2	463.23394775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PLYHPMPA_	REV__ENST00000320743.7_2_12:59313831-59314026:-|nuORF	43.626045697637714	0.6338121648150432	5				NaN	NaN	0	NaN	2766	3212	5978
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5981	20.938	NaN	1450.4	30	0	263.63	0.106	+			24884	LKKEKQAAY	9	31	360.2136091066618	1077.6189979201854	3	360.21331787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LKKEKQAAY_	COL17A1|p.P1229Rfs*22|1|0.39|ENSG00000065618|chr10:104034701-104034701|G/-|frameshift_variant;COL17A1|p.P847Qfs*219|1|0.17|ENSG00000065618|chr10:104042431-104042431|G/-|frameshift_variant;ENSG00000065618|ENST00000648076|COL17A1;nc|ENSG00000065618|Q9UMD9-2|COL17A1	19.1035232394073	0.6112419832031293	5				NaN	NaN	0	NaN	2767	3212	5978
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5982	20.939	NaN	1696.4	30	0	273.44	0.035				-1	RILACGVAK	9	59	494.29157740824655	986.5686018832931	2	494.29095458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_RILAC(Carbamidomethyl (C))GVAK_	ENSG00000265972|ENST00000582401|TXNIP	47.657333605630114	0.33044192980041115	5				NaN	NaN	0	NaN	2768	3212	5978
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5991	20.959	NaN	37786	30	0	4620	0.214	+			1180	AENKEIQKL	9	97	536.8029447592112	1071.5913365852223	2	536.8036499023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AENKEIQKL_	ENSG00000106541|ENST00000419304|AGR2	196.51786170233515	4.804850645652573E-05	5				NaN	NaN	0	NaN	2774	3215	5990
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5992	20.963	NaN	52682	30	0	11382	0.106	+			1181	AENKEIQKL	9	96	358.20466031505435	1071.592151545363	3	358.20440673828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AENKEIQKL_	ENSG00000106541|ENST00000419304|AGR2	109.47833844074708	0.029530294723441826	5				NaN	NaN	0	NaN	2775	3215	5990
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5993	20.965	NaN	8083.8	30	0	1109.8	0.106	+			40646	SVAQTVVQK	9	67	480.2795034517316	958.5444539702632	2	480.2792053222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVAQTVVQK_	ENSG00000057294|ENST00000340811|PKP2;nc|ENSG00000057294|Q99959|PKP2	155.5846463517096	0.005567437401040498	5				NaN	NaN	0	NaN	2776	3215	5990
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5994	20.967	NaN	3147.5	30	0	498.43	0.106	+			20789	KIADMGHLK	9	57	506.7838862077318	1011.5532194822637	2	506.7840576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KIADMGHLK_	ENSG00000132646|ENST00000379143|PCNA	114.8945686534367	0.024290463251177924	5				NaN	NaN	0	NaN	2777	3215	5990
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5995	20.969	NaN	1338.3	30	0	310.08	0.106			+	24472	LGGGQYQSRS	10	41	526.7603481085437	1051.5061432838872	2	526.7606811523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LGGGQYQSRS_	REV__DMRTB1|p.P297Rfs*13|3|0.27|ENSG00000143006|chr1:53464771-53464771|C/-|frameshift_variant;REV__ENSG00000143006|ENST00000371445|DMRTB1	32.81241826257853	0.6118718159329168	5				NaN	NaN	0	NaN	2778	3215	5990
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5996	20.97	NaN	8972.4	30	0	3573.5	0.036	+			20790	KIADMGHLK	9	54	338.1917258116109	1011.5533480350327	3	338.52593994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KIADMGHLK_	ENSG00000132646|ENST00000379143|PCNA	41.42661286455405	0.403525789677298	5				NaN	NaN	0	NaN	2779	3215	5990
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5997	20.971	NaN	1468.3	30	0	166.73	0.141	+			33848	RRFSMEVR	8	56	540.7884857617149	1079.5624185902298	2	541.77734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RRFSMEVR_	nc|ENSG00000117266|Q07002-3|CDK18	27.882242232435846	0.7440473649773525	5				NaN	NaN	0	NaN	2780	3215	5990
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6011	21.003	NaN	6755.8	30	0	3531.4	0.215	+			21687	KQEKEIQTL	9	57	558.816374623631	1115.6181963140618	2	558.8170776367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KQEKEIQTL_	ENSG00000176714|ENST00000324364|CCDC121;nc|ENSG00000176714|Q6ZUS5-2|CCDC121	64.20726635412375	0.17854274437659667	5				NaN	NaN	0	NaN	2791	3218	6010
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6012	21.006	NaN	6469.1	30	0	1238.7	0.106			+	24862	LKEGKGQL	8	59	436.76374872223494	871.5129445112699	2	436.763427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LKEGKGQL_	REV__THAP6|p.R99G|1|0.29|ENSG00000174796|chr4:75521742-75521742|A/G|missense_variant	120.62098272573253	0.23366758524054274	5				NaN	NaN	0	NaN	2792	3218	6010
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6013	21.008	NaN	8490.9	30	0	5232.5	0.106	+			40970	SVGGRHGPWK	10	39	360.86143880790365	1079.562487023911	3	360.8614196777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVGGRHGPWK_	ENST00000380751.9_2_5:69321199-69322288:+|nuORF	21.9598887501803	0.7004979571547932	5				NaN	NaN	0	NaN	2793	3218	6010
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6014	21.01	NaN	2642.9	30	0	280.23	0.106	+			42011	SVYRGSLTQR	10	64	583.8175591941199	1165.6205654550397	2	583.8178100585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVYRGSLTQR_	ENSG00000115648|ENST00000264605|MLPH;ENST00000477457.1_1_2:238455116-238462232:+|nuORF;nc|ENSG00000115648|Q9BV36-2|MLPH;nc|ENSG00000115648|Q9BV36-3|MLPH;nc|ENSG00000115648|Q9BV36-5|MLPH	45.02220120713402	0.5028680121232791	5				NaN	NaN	0	NaN	2794	3218	6010
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6015	21.012	NaN	30936	30	0	5051.2	0.106	+			19320	KAHLGTAL	8	75	405.7451991474197	809.4758453616395	2	405.7452087402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KAHLGTAL_	ENSG00000186468|ENST00000296674|RPS23;RPS23|p.N39T|1|0.25|ENSG00000186468|chr5:82277741-82277741|T/G|missense_variant	162.30552982961123	0.07443387879473526	5				NaN	NaN	0	NaN	2795	3218	6010
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6016	21.014	NaN	18306	30	0	3859.2	0.037	+			49778	VYQNHVQHL	9	53	379.86475496852023	1136.5724355057607	3	379.8649597167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VYQNHVQHL_	ARHGAP5|p.E893*|2|0.24|ENSG00000100852|chr14:32093338-32093339|-/T|frameshift_variant;ARHGAP5|p.F892Lfs*9|2|0.33|ENSG00000100852|chr14:32093339-32093339|T/-|frameshift_variant;ARHGAP5|p.F935Lfs*5|1|0.32|ENSG00000100852|chr14:32093469-32093469|T/-|frameshift_variant;ARHGAP5|p.N943Kfs*10|1|0.43|ENSG00000100852|chr14:32093489-32093490|-/A|frameshift_variant;ARHGAP5|p.S936*|1|0.32|ENSG00000100852|chr14:32093468-32093469|-/T|frameshift_variant;ARHGAP5|p.Y502Mfs*3|1|0.31|ENSG00000100852|chr14:32092168-32092168|T/-|frameshift_variant;ENSG00000100852|ENST00000345122|ARHGAP5;nc|ENSG00000100852|Q13017-2|ARHGAP5	40.5726180659479	0.4135428067754104	5				NaN	NaN	0	NaN	2796	3218	6010
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6017	21.014	NaN	2503.1	30	0	1132.8	0.143			+	26325	LSVVYVSESAL	11	37	389.54756898171365	1165.620877545341	3	389.54742431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSVVYVSESAL_	REV__ENSG00000164694|ENST00000297267|FNDC1;REV__FNDC1|p.T1443Nfs*81|2|0.16|ENSG00000164694|chr6:159239656-159239657|-/A|frameshift_variant;REV__FNDC1|p.T1443Pfs*84|1|0.31|ENSG00000164694|chr6:159239657-159239657|A/-|frameshift_variant;REV__nc|ENSG00000164694|Q4ZHG4-2|FNDC1	20.030474535948922	0.7766990143561855	5				NaN	NaN	0	NaN	2797	3218	6010
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6030	21.043	NaN	11550	30	0	2075.4	0.214				-1	EAKSTMICMNG	11	71	414.51515174124063	1240.523625823922	3	414.5153503417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_EAKSTMIC(Carbamidomethyl (C))MNG_	ENST00000369393.7_1_6:90513083-90513194:-|nuORF	37.59989570853033	0.5907838038483115	5				NaN	NaN	0	NaN	2807	3221	6029
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6031	21.047	NaN	12279	30	0	2331.5	0.106	+			33056	REKETKALSL	10	76	392.2309977343237	1173.671163803171	3	392.2311096191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_REKETKALSL_	ENSG00000100345|ENST00000216181|MYH9;ENSG00000133026|ENST00000360416|MYH10;ENSG00000133392|ENST00000300036|MYH11;nc|ENSG00000100345|P35579-2|MYH9;nc|ENSG00000133026|P35580-2|MYH10;nc|ENSG00000133026|P35580-3|MYH10;nc|ENSG00000133026|P35580-5|MYH10;nc|ENSG00000133026|P35580|MYH10;nc|ENSG00000133392|P35749-2|MYH11;nc|ENSG00000133392|P35749-3|MYH11;nc|ENSG00000133392|P35749-4|MYH11;SYNDIG1-MYH9|1|fusion	40.05817265558897	0.5486090488315611	5				NaN	NaN	0	NaN	2808	3221	6029
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6032	21.049	NaN	1428.6	30	0	139.29	0.106	+			49779	VYQNHVQHL	9	57	569.2932749033649	1136.5719968735298	2	569.2935791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYQNHVQHL_	ARHGAP5|p.E893*|2|0.24|ENSG00000100852|chr14:32093338-32093339|-/T|frameshift_variant;ARHGAP5|p.F892Lfs*9|2|0.33|ENSG00000100852|chr14:32093339-32093339|T/-|frameshift_variant;ARHGAP5|p.F935Lfs*5|1|0.32|ENSG00000100852|chr14:32093469-32093469|T/-|frameshift_variant;ARHGAP5|p.N943Kfs*10|1|0.43|ENSG00000100852|chr14:32093489-32093490|-/A|frameshift_variant;ARHGAP5|p.S936*|1|0.32|ENSG00000100852|chr14:32093468-32093469|-/T|frameshift_variant;ARHGAP5|p.Y502Mfs*3|1|0.31|ENSG00000100852|chr14:32092168-32092168|T/-|frameshift_variant;ENSG00000100852|ENST00000345122|ARHGAP5;nc|ENSG00000100852|Q13017-2|ARHGAP5	60.97194046774394	0.20551255781574032	5				NaN	NaN	0	NaN	2809	3221	6029
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6033	21.051	NaN	1539.9	30	0	240.21	0.106	+			40901	SVFNHAIRH	9	51	540.7884857617149	1079.5624185902298	2	540.7888793945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVFNHAIRH_	ENSG00000273749|ENST00000617928|CYFIP1;KBTBD2-CYFIP1|1|fusion	51.19269402634007	0.2889735674168909	5				NaN	NaN	0	NaN	2810	3221	6029
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6034	21.053	NaN	1049.8	30	0	272.47	0.106	+			10	AAAAPRAVA	9	37	399.23472320411514	796.4548934750303	2	399.23492431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AAAAPRAVA_	ENSG00000090621|ENST00000372858|PABPC4;nc|ENSG00000090621|Q13310-2|PABPC4;nc|ENSG00000090621|Q13310|PABPC4	31.954861631926434	0.5046124803899898	5				NaN	NaN	0	NaN	2811	3221	6029
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6035	21.054	NaN	5031.2	30	0	1081	0.037	+			33057	REKETKALSL	10	70	587.8429817226036	1173.671410512007	2	587.8430786132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_REKETKALSL_	ENSG00000100345|ENST00000216181|MYH9;ENSG00000133026|ENST00000360416|MYH10;ENSG00000133392|ENST00000300036|MYH11;nc|ENSG00000100345|P35579-2|MYH9;nc|ENSG00000133026|P35580-2|MYH10;nc|ENSG00000133026|P35580-3|MYH10;nc|ENSG00000133026|P35580-5|MYH10;nc|ENSG00000133026|P35580|MYH10;nc|ENSG00000133392|P35749-2|MYH11;nc|ENSG00000133392|P35749-3|MYH11;nc|ENSG00000133392|P35749-4|MYH11;SYNDIG1-MYH9|1|fusion	109.82975700811294	0.04850514657194457	5				NaN	NaN	0	NaN	2812	3221	6029
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6036	21.055	NaN	1453.3	30	0	309.18	0.141	+			24580	LGPGPAPPAT	10	47	439.2403092655666	NaN	0	439.24029541015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LGPGPAPPAT_	ENSG00000205143|ENST00000378909|ARID3C	55.50420428727701	0.270804100254592	5				NaN	NaN	0	NaN	2813	3221	6029
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6051	21.089	NaN	57463	30	0	10917	0.214	+			33939	RSAFTVIRK	9	94	359.8890396795203	1076.645289638761	3	359.888916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RSAFTVIRK_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	86.18897241530135	0.07560986027002226	5				NaN	NaN	0	NaN	2825	3224	6050
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6052	21.092	NaN	10801	30	0	6139.2	0.106			+	32693	RAGLPRLPPT	10	65	539.3297549763556	1076.6449570195111	2	539.3302612304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RAGLPRLPPT_	REV__ENST00000378617.3_3_9:35096152-35096341:-|nuORF;REV__ENST00000474436.1_1_9:35096140-35096341:-|nuORF	43.650786325866115	0.5155049133366767	5				NaN	NaN	0	NaN	2826	3224	6050
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6053	21.094	NaN	6578.2	30	0	764.09	0.106			+	18946	IVPENTHR	8	50	322.5102121827403	964.5088071484209	3	322.5101623535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IVPENTHR_	REV__ENSG00000147246|ENST00000276198|HTR2C	45.9519527083369	0.6193794311207887	5				NaN	NaN	0	NaN	2827	3224	6050
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6054	21.096	NaN	13817	30	0	6910.1	0.106	+			7805	DPKPQVSGR	9	34	328.513792344579	982.519547633937	3	328.5137634277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DPKPQVSGR_	ENSG00000128606|ENST00000339431|LRRC17;LRRC17|p.K424Nfs*12|1|0.42|ENSG00000128606|chr7:102944546-102944546|A/-|frameshift_variant;LRRC17|p.L313*|1|0.16|ENSG00000128606|chr7:102944214-102944214|T/-|frameshift_variant;nc|ENSG00000128606|Q8N6Y2-2|LRRC17	26.69291269510374	0.5537881896960711	5				NaN	NaN	0	NaN	2828	3224	6050
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6055	21.098	NaN	3494.5	30	0	1203.1	0.106	+			42696	TCVWGSSRC	9	59	499.7120665221767	997.4095801111534	2	499.7120666503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TCVWGSSRC_	ENST00000253506.9_1_18:77288339-77288585:+|nuORF	44.116797842482775	0.37197099687881774	5				NaN	NaN	0	NaN	2829	3224	6050
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6056	21.1	NaN	724.49	30	0	85.634	0.037	+			2617	AQIENSAAVEK	11	40	580.3015399777038	1158.5885270222075	2	580.302001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AQIENSAAVEK_	ENSG00000162645|ENST00000370466|GBP2	68.78561909154949	0.24586362119257035	5				NaN	NaN	0	NaN	2830	3224	6050
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6057	21.1	NaN	1551.2	30	0	256.43	0.153				-1	 	0	51	618.6049597914468	1852.7930499745403	3	618.60498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2831	3224	6050
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6070	21.13	NaN	2816.7	30	0	1114.5	0.214	+			42650	TAVIDHHNY	9	46	357.17349762433906	1068.4986634732172	3	357.17352294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAVIDHHNY_	ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656-2|DDOST;nc|ENSG00000244038|P39656-3|DDOST;nc|ENSG00000244038|P39656|DDOST	40.77816245573522	0.41113185337114944	5				NaN	NaN	0	NaN	2841	3227	6069
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6071	21.133	NaN	3630.1	30	0	527.69	0.106	+			6013	AVMDNKNPTIK	11	68	615.8285932154483	1229.6426334976966	2	615.8291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVMDNKNPTIK_	CKAP5|p.K1126Rfs*25|1|0.46|ENSG00000175216|chr11:46767609-46767609|T/-|frameshift_variant;CKAP5|p.V1971Lfs*42|1|0.03|ENSG00000175216|chr11:46744211-46744212|-/TTGAAAAAAAG|frameshift_variant;ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5	147.57670432137974	7.454744483674588E-05	5				NaN	NaN	0	NaN	2842	3227	6069
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6072	21.135	NaN	1704.3	30	0	410.81	0.106	+			2878	ASASASLPTK	10	53	466.7556865353121	NaN	0	466.7557678222656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASASASLPTK_	ENSG00000141568|ENST00000335255|FOXK2;ENST00000473637.6_1_17:80553997-80559372:+|nuORF;ENST00000529652.1_1_17:80558017-80559372:+|nuORF;ENST00000571989.1_1_17:80551586-80559372:+|nuORF	56.632244143249146	0.2617798060632103	5				NaN	NaN	0	NaN	2843	3227	6069
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6073	21.137	NaN	5617	30	0	2303.1	0.106	+			35099	SAGDAIRAI	9	56	437.2430421502232	872.4715313672464	2	437.24310302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SAGDAIRAI_	ENSG00000103111|ENST00000248248|MON1B;ENST00000566963.1_1_16:77225382-77227709:+|nuORF	66.42927471994793	0.16001998865088202	5				NaN	NaN	0	NaN	2844	3227	6069
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6074	21.139	NaN	1118.4	30	0	173.68	0.106			+	19254	KAEALYHRI	9	57	550.8137817382812	NaN	0	550.8137817382812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KAEALYHRI_	REV__ENSG00000100288|ENST00000406938|CHKB	40.77816245573522	0.2702456086868081	5				NaN	NaN	0	NaN	2845	3227	6069
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6075	21.141	NaN	4516	30	0	986.26	0.035	+			14963	GTMTGMLYK	9	56	517.2378300678535	1032.4611072025068	2	517.7406005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Oxidation (M)	_GTM(Oxidation (M))TGM(Oxidation (M))LYK_	ENSG00000178440|ENST00000651763|TIMM23B-AGAP6;ENSG00000204152|ENST00000651259|TIMM23B;ENSG00000265354|ENST00000580018|TIMM23;nc|ENSG00000204152|Q5SRD1-2|TIMM23B	62.107414245175825	0.1960472003779324	5				NaN	NaN	0	NaN	2846	3227	6069
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6076	21.141	NaN	2214.9	30	0	229.65	0.14				-1	EQAMLHAVQ	9	58	521.7514657581138	1041.4883785830275	2	521.7520751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_EQAM(Oxidation (M))LHAVQ_	ENSG00000183856|ENST00000361170|IQGAP3;IQGAP3|p.Q1205Sfs*31|1|0.4|ENSG00000183856|chr1:156534628-156534628|G/-|frameshift_variant	34.172542307311794	0.4838870758800184	5				NaN	NaN	0	NaN	2847	3227	6069
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6093	21.178	NaN	22583	30	0	4544.5	0.214	+			3072	ASFQSTSVK	9	67	477.74813436209905	953.4817157909981	2	477.7480163574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASFQSTSVK_	ENSG00000050405|ENST00000341247|LIMA1;nc|ENSG00000050405|Q9UHB6-2|LIMA1;nc|ENSG00000050405|Q9UHB6-3|LIMA1;nc|ENSG00000050405|Q9UHB6-4|LIMA1;nc|ENSG00000050405|Q9UHB6-5|LIMA1	131.115847015877	0.014647977962315902	5				NaN	NaN	0	NaN	2861	3230	6092
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6094	21.182	NaN	6321.9	30	0	1233.1	0.106	+			35806	SEAPGQRAL	9	64	464.74617736684365	927.4778018004873	2	464.74566650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEAPGQRAL_	ENSG00000114867|ENST00000346169|EIF4G1;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;ENST00000460829.5_1_3:184046782-184052693:+|nuORF;ENST00000478291.1_1_3:184049262-184049734:+|nuORF;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1	62.107414245175825	0.1960472003779324	5				NaN	NaN	0	NaN	2862	3230	6092
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6095	21.184	NaN	5201.2	30	0	2785	0.106				-1	 	0	49	384.77209604529315	767.5296391573863	2	384.7720031738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2863	3230	6092
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6096	21.186	NaN	5869.4	30	0	3141.9	0.106	+			290	AAPDGTRNL	9	55	457.73779337797305	913.4610338227461	2	457.7383728027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AAPDGTRNL_	ENSG00000132953|ENST00000255305|XPO4;XPO4|p.C1022Afs*8|1|0.21|ENSG00000132953|chr13:20787582-20787582|A/-|frameshift_variant	40.77816245573522	0.41113185337114944	5				NaN	NaN	0	NaN	2864	3230	6092
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6097	21.188	NaN	3032.4	30	0	337.93	0.106	+			3738	ATAAVTAAVK	10	60	451.7685654072469	901.5225778812938	2	451.76885986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATAAVTAAVK_	ENSG00000165476|ENST00000373758|REEP3;nc|ENSG00000165476|Q6NUK4-2|REEP3	56.632244143249146	0.3964695498866976	5				NaN	NaN	0	NaN	2865	3230	6092
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6098	21.189	NaN	6852.9	30	0	1698.6	0.035	+			37820	SMNANTITK	9	67	490.2472402653527	978.4799275975054	2	490.2470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SMNANTITK_	ENSG00000175467|ENST00000312397|SART1	109.82975700811294	0.02917171107062681	5				NaN	NaN	0	NaN	2866	3230	6092
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6099	21.19	NaN	1255.8	30	0	267.29	0.14	+			44562	TTAQLQVQK	9	60	508.79040706629104	1015.5662611993821	2	508.7909851074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TTAQLQVQK_	ENSG00000127603|ENST00000564288|MACF1;nc|ENSG00000127603|O94854|MACF1;nc|ENSG00000127603|Q9UPN3-2|MACF1;nc|ENSG00000127603|Q9UPN3-3|MACF1;nc|ENSG00000127603|Q9UPN3-4|MACF1;nc|ENSG00000127603|Q9UPN3-5|MACF1;nc|ENSG00000127603|Q9UPN3|MACF1	58.2462437865262	0.22823408064396822	5				NaN	NaN	0	NaN	2867	3230	6092
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6115	21.225	NaN	4776	30	0	2568	0.211			+	-1	NYEEKAADILC	11	48	663.3077830008216	1324.601013068443	2	663.3075561523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_NYEEKAADILC(Carbamidomethyl (C))_	REV__ENSG00000176393|ENST00000295640|RNPEP;REV__ENST00000471105.5_1_1:201958137-201965500:+|nuORF;REV__ENST00000478617.5_1_1:201952590-201969135:+|nuORF;REV__ENST00000492587.5_1_1:201958137-201969135:+|nuORF	42.86426827375447	0.5187511139693657	5				NaN	NaN	0	NaN	2880	3233	6114
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6116	21.228	NaN	1229.4	30	0	616.33	0.106			+	2136	ALKEQTRP	8	42	471.7718449786493	941.5291370240986	2	471.7713928222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ALKEQTRP_	REV__ENST00000528947.5_2_11:7535100-7569685:+|nuORF	25.450171626174864	0.7628259754767981	5				NaN	NaN	0	NaN	2881	3233	6114
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6117	21.23	NaN	923.02	30	0	79.484	0.106			+	11370	FLIPCVQQL	9	42	530.794921875	NaN	0	530.794921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FLIPCVQQL_	REV__ENST00000475582.5_1_2:27590663-27590978:-|nuORF	40.5726180659479	0.27166212580479165	5				NaN	NaN	0	NaN	2882	3233	6114
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6118	21.232	NaN	1502.8	30	0	231.76	0.106			+	13544	GLSLGISPVVC	11	49	522.792652594955	1043.57075225671	2	522.7919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GLSLGISPVVC_	REV__ENST00000359321.1_1_7:152357836-152373217:-|nuORF	39.252832667884924	0.5681665794958463	5				NaN	NaN	0	NaN	2883	3233	6114
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6119	21.234	NaN	1877.5	30	0	700.96	0.106	+			3004	ASFDKAKLK	9	53	504.2975311917768	1006.5805094503536	2	504.2977600097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASFDKAKLK_	ENSG00000034510|ENST00000233143|TMSB10	47.95952297671804	0.32689736945648856	5				NaN	NaN	0	NaN	2884	3233	6114
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6120	21.236	NaN	3136.9	30	0	907.41	0.037	+			17973	IGYLIFYII	9	52	372.2231220271187	NaN	0	371.88787841796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IGYLIFYII_	CASD1|p.A543Sfs*33|1|0.32|ENSG00000127995|chr7:94545686-94545687|-/A|frameshift_variant;ENSG00000127995|ENST00000297273|CASD1	29.14955571784316	0.3303970763161698	5				NaN	NaN	0	NaN	2885	3233	6114
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6121	21.236	NaN	2774.2	30	0	1473.8	0.142				-1	PTVLMASLPF	10	34	364.53186664510986	1090.5737705355295	3	364.5318908691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_PTVLM(Oxidation (M))ASLPF_	ENSG00000181499|ENST00000321252|OR6T1;OR6T1|p.K196Nfs*18|1|0.27|ENSG00000181499|chr11:123943251-123943251|T/-|frameshift_variant	21.68575002086885	0.7027366847906487	5				NaN	NaN	0	NaN	2886	3233	6114
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6137	21.272	NaN	41922	30	0	12592	0.204	+			37107	SISSGPIQK	9	62	458.7583241030427	915.5020952728854	2	458.7583312988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SISSGPIQK_	ENSG00000006611|ENST00000005226|USH1C;nc|ENSG00000006611|Q9Y6N9-2|USH1C;nc|ENSG00000006611|Q9Y6N9-3|USH1C;nc|ENSG00000006611|Q9Y6N9-4|USH1C;nc|ENSG00000006611|Q9Y6N9|USH1C	143.8867514904718	0.008656634767784652	5				NaN	NaN	0	NaN	2899	3236	6136
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6138	21.275	NaN	1903.5	30	0	214.91	0.106	+			42622	TAVCHTDAY	9	57	519.2216753702091	NaN	0	519.2217407226562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_TAVC(Carbamidomethyl (C))HTDAY_	ENSG00000197894|ENST00000296412|ADH5;ENST00000507102.5_2_4:100003111-100009857:-|nuORF;ENST00000508511.5_1_4:99997418-100009857:-|nuORF;ENST00000512621.5_1_4:99993722-100006301:-|nuORF	111.64827973302667	0.008208597185614463	5				NaN	NaN	0	NaN	2900	3236	6136
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6139	21.277	NaN	4832.9	30	0	964.43	0.106				-1	SLGPGHPPCLA	11	51	369.1868856761467	NaN	0	369.1867980957031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SLGPGHPPC(Carbamidomethyl (C))LA_	nc|ENSG00000127564|Q99640-2|PKMYT1	31.634271133179894	0.4244354679066847	5				NaN	NaN	0	NaN	2901	3236	6136
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6140	21.279	NaN	2151	30	0	338.73	0.106	+			24144	LELEVAER	8	55	479.7637174210449	957.5128819088898	2	479.7637634277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LELEVAER_	ENST00000434123.2_1_9:42267014-42267233:+|nuORF;nc|ENSG00000290618|P0DPF6|CDRT15P3	87.75429964447693	0.2842685068779738	5				NaN	NaN	0	NaN	2902	3236	6136
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6141	21.281	NaN	1253	30	0	97.483	0.106			+	-1	FELCDVDLVCL	11	43	442.5403747558594	NaN	0	442.5403747558594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_FELCDVDLVC(Carbamidomethyl (C))L_	REV__ENSG00000105173|ENST00000262643|CCNE1;REV__nc|ENSG00000105173|P24864-2|CCNE1;REV__nc|ENSG00000105173|P24864-3|CCNE1	24.231819034082204	0.456735970842152	5				NaN	NaN	0	NaN	2903	3236	6136
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6142	21.282	NaN	5192.7	30	0	1695.5	0.106	+			38633	SSHLNLKVE	9	36	342.85718074355384	1025.5497128308616	3	342.8570251464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSHLNLKVE_	ENSG00000106701|ENST00000481272|FSD1L;nc|ENSG00000106701|Q9BXM9-2|FSD1L	39.252832667884924	0.4290233611298554	5				NaN	NaN	0	NaN	2904	3236	6136
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6143	21.284	NaN	2238	30	0	662.96	0.036	+			21502	KNLNKQLEK	9	60	557.8324431054174	1113.6503332776347	2	558.3342895507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KNLNKQLEK_	ARHGAP29|p.K371Sfs*12|1|0.32|ENSG00000137962|chr1:94202575-94202575|T/-|frameshift_variant;ARHGAP29|p.K679Rfs*35|1|0.28|ENSG00000137962|chr1:94184945-94184945|T/-|frameshift_variant;ENSG00000137962|ENST00000260526|ARHGAP29;nc|ENSG00000137962|Q52LW3-2|ARHGAP29	80.45461616416974	0.09558281504443908	5				NaN	NaN	0	NaN	2905	3236	6136
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6161	21.322	NaN	11871	30	0	2029.2	0.214	+			43640	TIQSGEQPYK	10	78	575.7904229596272	1149.5662929860543	2	575.790771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TIQSGEQPYK_	ENSG00000168653|ENST00000372969|NDUFS5	154.0112374973812	0.007783311651969589	5				NaN	NaN	0	NaN	2920	3239	6160
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6162	21.325	NaN	6083.8	30	0	1901.5	0.106			+	33986	RSGFRETAE	9	65	526.7603481085437	1051.5061432838872	2	526.7611083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RSGFRETAE_	REV__ENST00000562009.1_1_15:74654250-74654382:+|nuORF	56.72105179125745	0.24094814563026265	5				NaN	NaN	0	NaN	2921	3239	6160
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6163	21.327	NaN	3961.6	30	0	561.45	0.106	+			27355	MINNSRNL	8	55	481.2463149989945	960.478077064789	2	481.24591064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MINNSRNL_	ENSG00000124155|ENST00000279036|PIGT;nc|ENSG00000124155|Q969N2-2|PIGT;nc|ENSG00000124155|Q969N2-3|PIGT;nc|ENSG00000124155|Q969N2-4|PIGT;nc|ENSG00000124155|Q969N2-5|PIGT;nc|ENSG00000124155|Q969N2-6|PIGT	34.172542307311794	0.6954784234644539	5				NaN	NaN	0	NaN	2922	3239	6160
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6164	21.329	NaN	2793.8	30	0	468.44	0.106	+			23020	KVSQVIMEK	9	58	531.3045218570094	1060.5944907808187	2	531.30517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KVSQVIMEK_	ENSG00000164985|ENST00000380733|PSIP1	68.84614121027924	0.14577793175421136	5				NaN	NaN	0	NaN	2923	3239	6160
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6165	21.331	NaN	1793.7	30	0	319.53	0.106	+			16833	HPDSVSSSY	9	52	489.71155821575155	977.4085634983031	2	489.7111511230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HPDSVSSSY_	ENSG00000148396|ENST00000684901|SEC16A;nc|ENSG00000148396|O15027-2|SEC16A;nc|ENSG00000148396|O15027-3|SEC16A;nc|ENSG00000148396|O15027-4|SEC16A;nc|ENSG00000148396|O15027-5|SEC16A;SEC16A|p.P2155Hfs*25|1|0.25|ENSG00000148396|chr9:136447664-136447664|G/-|frameshift_variant;SEC16A|p.P597Rfs*18|1|0.07|ENSG00000148396|chr9:136475826-136475826|G/-|frameshift_variant	85.35947970620816	0.07794846947388434	5				NaN	NaN	0	NaN	2924	3239	6160
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6166	21.333	NaN	3409.8	30	0	1008.2	0.036	+			33641	RMHRPARK	8	44	351.2064178821877	1050.597424246763	3	351.2064208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RMHRPARK_	ENSG00000177963|ENST00000526104|RIC8A;ENST00000527039.1_1_11:209766-212514:+|nuORF;ENST00000530149.1_1_11:212394-212514:+|nuORF;nc|ENSG00000177963|Q9NPQ8-2|RIC8A;nc|ENSG00000177963|Q9NPQ8-3|RIC8A;nc|ENSG00000177963|Q9NPQ8-4|RIC8A	18.324413293986947	0.7971860551947066	5				NaN	NaN	0	NaN	2925	3239	6160
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6167	21.333	NaN	1236.8	30	0	129.44	0.141	+			50735	YEKDDKLTP	9	50	554.7796426940079	1107.5447324548156	2	554.7798461914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YEKDDKLTP_	ENSG00000092820|ENST00000367075|EZR	51.52775601994872	0.28504342437107444	5				NaN	NaN	0	NaN	2926	3239	6160
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6182	21.368	NaN	10421	30	0	3405	0.214	+			50516	YAPKGSSL	8	54	411.72128893059755	821.4280249279951	2	411.7213134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YAPKGSSL_	ENSG00000166224|ENST00000373202|SGPL1	54.776311868738084	0.5534952410049249	5				NaN	NaN	0	NaN	2938	3242	6181
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6183	21.371	NaN	2802.3	30	0	636.44	0.106	+			38170	SQCDSPYVTK	10	53	592.7664521900011	NaN	0	592.7664794921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SQC(Carbamidomethyl (C))DSPYVTK_	ENSG00000102572|ENST00000539966|STK24;ENST00000481288.1_1_13:99161185-99171658:-|nuORF;nc|ENSG00000102572|Q9Y6E0|STK24	147.30332882356183	0.001650535592337172	5				NaN	NaN	0	NaN	2939	3242	6181
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6184	21.373	NaN	1878	30	0	547.86	0.106				-1	EAKCTFIPK	9	51	547.2904718245724	1092.5663907159446	2	547.2910766601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_EAKC(Carbamidomethyl (C))TFIPK_	nc|ENSG00000291014|Q9Y6N3|CLCA3P	39.252832667884924	0.4290233611298554	5				NaN	NaN	0	NaN	2940	3242	6181
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6185	21.375	NaN	3948.8	30	0	849.8	0.106	+			44341	TSGPTTPLK	9	56	451.25304063480445	900.4915283364089	2	451.2528381347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TSGPTTPLK_	ENSG00000188112|ENST00000341865|C6orf132	67.49366992349736	0.1516260258713357	5				NaN	NaN	0	NaN	2941	3242	6181
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6186	21.377	NaN	4086.3	30	0	1082.3	0.106	+			35260	SALLAGNL	8	43	379.7239681570431	757.4333833808862	2	379.723876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SALLAGNL_	ENSG00000143554|ENST00000624995|SLC27A3;ENST00000368660.1_1_1:153751554-153752475:+|nuORF;ENST00000483574.6_1_1:153751589-153752475:+|nuORF;nc|ENSG00000143554|Q5K4L6-2|SLC27A3	50.0245360154114	0.5941082100236891	5				NaN	NaN	0	NaN	2942	3242	6181
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6187	21.379	NaN	2684.4	30	0	1068.5	0.037	+			31282	QICDTYNQK	9	51	585.2664818442884	1168.5184107553766	2	585.2669067382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_QIC(Carbamidomethyl (C))DTYNQK_	ENSG00000165175|ENST00000614558|MID1IP1	58.22992032128504	0.22837015374068087	5				NaN	NaN	0	NaN	2943	3242	6181
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6188	21.379	NaN	1518.6	30	0	118.3	0.141	+			16249	HEEKVFRAV	9	54	557.8040433317482	1113.5935337302963	2	557.8041381835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HEEKVFRAV_	ENSG00000095139|ENST00000264028|ARCN1;nc|ENSG00000095139|P48444-2|ARCN1	63.53385203322761	0.18415635464017938	5				NaN	NaN	0	NaN	2944	3242	6181
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6205	21.416	NaN	91063	30	0	27255	0.214	+			48412	VTIKEGSQLK	10	96	368.22032616755484	1101.6391491028646	3	368.2203674316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTIKEGSQLK_	ENSG00000100138|ENST00000401959|SNU13	70.39856735676683	0.27406383984062843	5				NaN	NaN	0	NaN	2958	3245	6204
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6206	21.42	NaN	3402.5	30	0	771.3	0.106	+			4129	ATEHLSTLSEK	11	61	608.3142828716676	1214.6140128101351	2	608.3146362304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATEHLSTLSEK_	ENSG00000118137|ENST00000236850|APOA1	96.66504779109242	0.07148984068916604	5				NaN	NaN	0	NaN	2959	3245	6204
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6207	21.422	NaN	2161.1	30	0	616.94	0.106	+			5058	ATSGVVAVR	9	46	430.253438251741	858.492323570282	2	430.2532043457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATSGVVAVR_	ENSG00000074054|ENST00000696935|CLASP1;nc|ENSG00000074054|Q7Z460-2|CLASP1;nc|ENSG00000074054|Q7Z460-3|CLASP1;nc|ENSG00000074054|Q7Z460-4|CLASP1;nc|ENSG00000074054|Q7Z460-5|CLASP1;nc|ENSG00000074054|Q7Z460|CLASP1	62.107414245175825	0.1960472003779324	5				NaN	NaN	0	NaN	2960	3245	6204
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6208	21.423	NaN	4386.6	30	0	487.24	0.106	+			40399	STVEKIAMK	9	73	503.7835707621785	NaN	0	503.7835388183594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STVEKIAMK_	ENSG00000129657|ENST00000436233|SEC14L1;nc|ENSG00000129657|Q92503-2|SEC14L1;nc|ENSG00000129657|Q92503-3|SEC14L1;SEC14L1|p.G159Efs*12|1|0.17|ENSG00000129657|chr17:77193544-77193544|A/-|frameshift_variant	58.22992032128504	0.15686832049467786	5				NaN	NaN	0	NaN	2961	3245	6204
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6209	21.425	NaN	3243.4	30	0	1991.8	0.106	+			35467	SASTHKTI	8	43	422.729604690953	NaN	0	422.7294616699219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SASTHKTI_	ANKRD17|p.L2249Yfs*84|1|0.34|ENSG00000132466|chr4:73090884-73090884|G/-|frameshift_variant;ENSG00000132466|ENST00000358602|ANKRD17;nc|ENSG00000132466|O75179-2|ANKRD17;nc|ENSG00000132466|O75179-4|ANKRD17;nc|ENSG00000132466|O75179-6|ANKRD17;nc|ENSG00000132466|O75179-7|ANKRD17	34.172542307311794	1.7418937515398478	5				NaN	NaN	0	NaN	2962	3245	6204
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6210	21.427	NaN	6602.4	30	0	2306.8	0.106	+			48929	VVDYPNSAK	9	56	496.75558889678234	991.4966248603647	2	496.7558898925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VVDYPNSAK_	ENSG00000071462|ENST00000265758|BUD23;ENST00000421744.5_1_7:73101164-73110778:+|nuORF;ENST00000432522.5_1_7:73101195-73108381:+|nuORF;ENST00000436944.5_1_7:73101164-73117856:+|nuORF;ENST00000463307.5_1_7:73107559-73112213:+|nuORF;ENST00000487006.2_1_7:73101416-73107745:+|nuORF;ENST00000496153.5_1_7:73097949-73108381:+|nuORF;nc|ENSG00000071462|O43709-3|BUD23	54.722347961057174	0.257609425301511	5				NaN	NaN	0	NaN	2963	3245	6204
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6211	21.429	NaN	3260.8	30	0	1046.2	0.032	+			1980	AKAIGYAT	8	52	397.723903811379	793.433254689558	2	397.72393798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AKAIGYAT_	ENSG00000275395|ENST00000616721|FCGBP;FCGBP-ACSS2|1|fusion;nc|ENSG00000275395|Q9Y6R7|FCGBP	68.78682469695295	0.41700713582915416	5				NaN	NaN	0	NaN	2964	3245	6204
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6225	21.459	NaN	13700	30	0	1838.2	0.214	+			15909	HAANQSYQY	9	66	541.2383064620107	1080.4620599908212	2	541.23876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HAANQSYQY_	ENSG00000130402|ENST00000252699|ACTN4;ENST00000588618.5_1_19:39138385-39212431:+|nuORF;nc|ENSG00000130402|O43707-2|ACTN4;nc|ENSG00000130402|O43707-3|ACTN4	115.49404669440601	0.023927554121326553	5				NaN	NaN	0	NaN	2975	3248	6224
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6226	21.462	NaN	2708.3	30	0	370.91	0.106	+			12612	GEIDGNKV	8	51	416.2138422528161	830.4131315724322	2	416.2137756347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEIDGNKV_	ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232319904-232323320:-|nuORF	49.44154591367651	0.597725784090933	5				NaN	NaN	0	NaN	2976	3248	6224
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6227	21.464	NaN	1474.3	30	0	184.67	0.106	+			9079	EGGWGLKSQ	9	53	481.2426842611121	960.4708155890243	2	481.7974853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EGGWGLKSQ_	ENSG00000262152|ENST00000573315|GREP1	47.657333605630114	0.33044192980041115	5				NaN	NaN	0	NaN	2977	3248	6224
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6228	21.466	NaN	1290	30	0	224.16	0.106			+	31727	QPAAALQLEQ	10	56	534.7877605803003	1067.5609682274005	2	534.788330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QPAAALQLEQ_	REV__ENSG00000006555|ENST00000371276|TTC22;REV__nc|ENSG00000006555|Q5TAA0-2|TTC22	29.170058357718403	0.6416167986984785	5				NaN	NaN	0	NaN	2978	3248	6224
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6229	21.468	NaN	1360.1	30	0	405.81	0.106			+	-1	VYLLFGRCFCC	11	39	711.8210471104005	NaN	0	711.8209228515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))VYLLFGRC(Carbamidomethyl (C))FCC_	REV__ENST00000460291.1_1_3:11383675-11389548:+|nuORF	27.882242232435846	0.44115667141176046	5				NaN	NaN	0	NaN	2979	3248	6224
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6230	21.47	NaN	886.41	30	0	149.69	0.037	+			48464	VTLPAPPPPPV	11	27	362.216796875	NaN	0	362.216796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTLPAPPPPPV_	ARHGEF26|p.T596Nfs*3|1|0.29|ENSG00000114790|chr3:154194653-154194654|-/A|frameshift_variant;ENSG00000114790|ENST00000465093|ARHGEF26;nc|ENSG00000114790|Q96DR7-3|ARHGEF26;nc|ENSG00000114790|Q96DR7-4|ARHGEF26	15.333111300571575	0.456735970842152	5				NaN	NaN	0	NaN	2980	3248	6224
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6231	21.47	NaN	1284.6	30	0	196.08	0.139	+			36246	SEMRAPPAA	9	42	465.2301645113313	928.4457760894626	2	465.23016357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SEMRAPPAA_	ENSG00000108312|ENST00000436088|UBTF;ENST00000531368.1_1_17:42286674-42287095:-|nuORF;nc|ENSG00000108312|P17480-2|UBTF	47.657333605630114	0.33044192980041115	5				NaN	NaN	0	NaN	2981	3248	6224
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6249	21.51	NaN	17054	30	0	9998.7	0.214				-1	KFMKPGKVVL	10	60	388.2385877767208	1161.6939339303624	3	387.90435791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_KFM(Oxidation (M))KPGKVVL_	ENSG00000131469|ENST00000253788|RPL27;ENST00000587478.1_1_17:41150475-41150953:+|nuORF;ENST00000593262.1_1_17:41150683-41150953:+|nuORF	40.05817265558897	0.5486090488315611	5				NaN	NaN	0	NaN	2996	3251	6248
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6250	21.513	NaN	8260.8	30	0	1715.9	0.106	+			4899	ATQGATEIVK	10	64	509.2823239387184	1016.5500949442368	2	509.2824401855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATQGATEIVK_	ENSG00000104321|ENST00000262209|TRPA1;TRPA1|p.G505Rfs*7|1|0.38|ENSG00000104321|chr8:72055452-72055453|-/T|frameshift_variant;TRPA1|p.L1023Ffs*15|1|0.42|ENSG00000104321|chr8:72023894-72023895|-/A|frameshift_variant;TRPA1|p.N377Ifs*25|1|0.08|ENSG00000104321|chr8:72056981-72056982|-/AAACTAATTTTGTTTATTA|frameshift_variant;TRPA1|p.T673Hfs*23|1|0.45|ENSG00000104321|chr8:72046557-72046557|T/-|frameshift_variant;TRPA1|p.Y327*|1|0.36|ENSG00000104321|chr8:72059399-72059402|TAAA/-|frameshift_variant	147.73206827945663	0.008898223230177705	5				NaN	NaN	0	NaN	2997	3251	6248
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6251	21.515	NaN	3819.2	30	0	1559	0.106				-1	 	0	37	323.2015245319833	644.3884961307666	2	323.20135498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2998	3251	6248
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6252	21.517	NaN	1825.6	30	0	341.65	0.106	+			37753	SLVDFSTNNQ	10	56	562.7640867207067	1123.5136205082133	2	562.764404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLVDFSTNNQ_	ENSG00000132382|ENST00000254718|MYBBP1A;ENST00000573175.1_1_17:4451225-4453465:-|nuORF;nc|ENSG00000132382|Q9BQG0-2|MYBBP1A	45.97224482568171	0.49411383603842696	5				NaN	NaN	0	NaN	2999	3251	6248
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6253	21.519	NaN	4053.3	30	0	390.62	0.106	+			25265	LNNKEKKTM	9	61	553.3050255862183	1104.5954982392366	2	553.3056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LNNKEKKTM_	tr|U7SYR4|U7SYR4_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00904PE=4SV=1	70.8162118820467	0.13725933411854815	5				NaN	NaN	0	NaN	3000	3251	6248
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6254	21.521	NaN	3119.8	30	0	1917.8	0.034	+			43470	TGPAGPEGKE	10	46	471.72987007673424	941.4451872202685	2	471.72967529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TGPAGPEGKE_	ENSG00000086015|ENST00000361297|MAST2;MAST2-HP1BP3|1|fusion;MAST2|p.R1274Dfs*9|1|0.49|ENSG00000086015|chr1:46034213-46034213|C/-|frameshift_variant;nc|ENSG00000086015|Q6P0Q8-2|MAST2	36.446750945000026	0.5818864909973037	5				NaN	NaN	0	NaN	3001	3251	6248
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6255	21.521	NaN	1549.7	30	0	196.82	0.139	+			18443	ISCWGIKK	8	50	467.76368372099535	NaN	0	467.76373291015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ISCWGIKK_	ENST00000321023.5_1_12:6204574-6232125:-|nuORF	30.503639358989545	1.7418937515398478	5				NaN	NaN	0	NaN	3002	3251	6248
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6269	21.552	NaN	5928	30	0	1139.4	0.214			+	15775	GVTDWVDR	8	67	474.2333978560994	946.4522427789988	2	474.7317199707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVTDWVDR_	REV__ENSG00000129250|ENST00000320785|KIF1C;REV__KIF1C|p.K1057Sfs*31|1|0.14|ENSG00000129250|chr17:5024005-5024005|A/-|frameshift_variant;REV__KIF1C|p.L962Cfs*126|1|0.31|ENSG00000129250|chr17:5023717-5023717|G/-|frameshift_variant;REV__KIF1C|p.Y1081Ifs*15|1|0.28|ENSG00000129250|chr17:5024072-5024073|-/C|frameshift_variant;REV__nc|ENSG00000054523|O60333-3|KIF1B	55.50420428727701	0.5462892107279674	5				NaN	NaN	0	NaN	3013	3254	6268
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6270	21.556	NaN	8826.6	30	0	2280.6	0.106	+			49239	VVNKVPLTGK	10	59	352.225428655565	NaN	0	352.2253723144531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVNKVPLTGK_	ENSG00000151135|ENST00000280756|TMEM263	45.02220120713402	0.3370728479115332	5				NaN	NaN	0	NaN	3014	3254	6268
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6271	21.558	NaN	1156.6	30	0	168.97	0.106			+	21928	KRVRMCISC	9	46	548.2846069335938	NaN	0	548.2846069335938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KRVRMCISC_	REV__ENST00000392557.8_1_14:105713416-105713644:-|nuORF	35.15202426646627	0.3000918603816441	5				NaN	NaN	0	NaN	3015	3254	6268
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6272	21.56	NaN	1448.2	30	0	136.47	0.106			+	18822	ITVVFALDL	9	57	495.79498291015625	NaN	0	495.79498291015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ITVVFALDL_	REV__ENST00000263238.6_1_2:114713257-114715078:+|nuORF	63.30626980617807	0.13521764763214936	5				NaN	NaN	0	NaN	3016	3254	6268
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6273	21.562	NaN	2124.6	30	0	168.77	0.106			+	12549	GEGGLKLIKG	10	59	486.29771531866214	NaN	0	486.297607421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GEGGLKLIKG_	REV__ENST00000437621.6_1_7:1609854-1614397:+|nuORF	60.11826168202944	0.2333124524861241	5				NaN	NaN	0	NaN	3017	3254	6268
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6274	21.563	NaN	1380.1	30	0	548.38	0.106			+	-1	MAPPGLPL	8	35	406.2243957519531	NaN	0	406.2243957519531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_M(Oxidation (M))APPGLPL_	REV__ZNF687|p.A639Pfs*74|1|0.27|ENSG00000143373|chr1:151288202-151288202|G/-|frameshift_variant	24.504012794735996	1.7418937515398478	5				NaN	NaN	0	NaN	3018	3254	6268
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6275	21.565	NaN	1252.8	30	0	131.53	0.033			+	29500	PDAHKAAM	8	39	420.705120574595	839.39568821599	2	420.7049865722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PDAHKAAM_	REV__ENST00000447530.5_1_X:151883158-151884479:+|nuORF	47.91560031466742	0.6071945918984287	5				NaN	NaN	0	NaN	3019	3254	6268
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6288	21.592	NaN	6235.8	30	0	2788	0.214	+			2583	AQFGGKILRK	10	37	373.2329829602982	1116.6771194810947	3	373.23284912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AQFGGKILRK_	ENSG00000070047|ENST00000264555|PHRF1;nc|ENSG00000070047|Q9P1Y6-2|PHRF1;nc|ENSG00000070047|Q9P1Y6-3|PHRF1;PHRF1|p.E1225Kfs*62|1|0.36|ENSG00000070047|chr11:609125-609125|G/-|frameshift_variant;PHRF1|p.L1393Cfs*8|1|0.38|ENSG00000070047|chr11:609628-609628|C/-|frameshift_variant;PHRF1|p.P938Qfs*23|2|0.45|ENSG00000070047|chr11:608263-608263|C/-|frameshift_variant;PHRF1|p.T1126Pfs*73|1|0.36|ENSG00000070047|chr11:608827-608827|C/-|frameshift_variant	26.69291269510374	0.6618461711292317	5				NaN	NaN	0	NaN	3029	3257	6287
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6289	21.596	NaN	1887.8	30	0	573.47	0.106	+			10590	EYKKAKLQ	8	57	504.2978538556821	NaN	0	504.2987060546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EYKKAKLQ_	tr|U7SGL3|U7SGL3_FUSNUOutermembraneeffluxproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02229PE=3SV=1	76.7741389293348	1.7418937515398478	5				NaN	NaN	0	NaN	3030	3257	6287
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6290	21.598	NaN	5399.5	30	0	3128.6	0.106	+			45349	TVSSLAIRK	9	35	325.5381048518782	973.5924851558345	3	325.5379638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVSSLAIRK_	ENSG00000088367|ENST00000338074|EPB41L1;nc|ENSG00000088367|Q9H4G0-2|EPB41L1;nc|ENSG00000088367|Q9H4G0-3|EPB41L1;nc|ENSG00000088367|Q9H4G0-4|EPB41L1	39.252832667884924	0.4290233611298554	5				NaN	NaN	0	NaN	3031	3257	6287
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6291	21.6	NaN	402.52	30	0	68.121	0.106				-1	AMILAIPMSTQ	11	30	596.3072154076174	NaN	0	596.3075561523438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_AMILAIPM(Oxidation (M))STQ_	ENST00000264888.5_1_4:76924418-76924595:-|nuORF	17.468008924990375	0.456735970842152	5				NaN	NaN	0	NaN	3032	3257	6287
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6292	21.602	NaN	987.82	30	0	77.796	0.106	+			2014	AKLRAIKQQ	9	49	528.3370971679688	NaN	0	528.3370971679688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AKLRAIKQQ_	ENSG00000248712|ENST00000503566|CCDC153;ENST00000375140.7_1_11:119061011-119064134:-|nuORF;nc|ENSG00000248712|Q494R4-2|DRC12	17.364965105453717	0.37820932774828947	5				NaN	NaN	0	NaN	3033	3257	6287
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6293	21.603	NaN	755.38	30	0	134.83	0.035	+			51515	YVRPAEPAF	9	44	525.275146484375	NaN	0	525.275146484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YVRPAEPAF_	ENSG00000163807|ENST00000296121|KIAA1143	25.57405402267927	0.3484490411150625	5				NaN	NaN	0	NaN	3034	3257	6287
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6301	21.622	NaN	1904.5	30	0	386.73	0.146	+			32202	QSVVTALRAMK	11	40	401.8998783561914	1202.6778056687742	3	401.8997497558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QSVVTALRAMK_	ENST00000325006.7_1_7:129066991-129067174:+|nuORF	24.231819034082204	0.7356191775841856	5				NaN	NaN	0	NaN	3039	3260	6300
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6314	21.651	NaN	5082.1	30	0	769.99	0.214	+			44846	TTTGHLIYK	9	62	517.2870993113137	1032.5596456894273	2	517.2877807617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTTGHLIYK_	EEF1A1|p.P263Lfs*27|1|0.36|ENSG00000156508|chr6:73518595-73518595|G/-|frameshift_variant;EEF1A2|p.T239Hfs*50|1|0.26|ENSG00000101210|chr20:63493194-63493195|-/G|frameshift_variant;EEF1A2|p.T239Rfs*40|1|0.31|ENSG00000101210|chr20:63493195-63493195|G/-|frameshift_variant;ENSG00000101210|ENST00000217182|EEF1A2;ENSG00000156508|ENST00000309268|EEF1A1;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	96.19043198914106	0.047412499214244314	5				NaN	NaN	0	NaN	3049	3263	6313
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6315	21.654	NaN	1489.8	30	0	224.39	0.106	+			47720	VSFPGNVLL	9	52	473.2715423387185	NaN	0	473.27191162109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSFPGNVLL_	ENST00000578926.1_1_7:86811567-86815316:+|nuORF;ENST00000582887.1_1_7:86811523-86815316:+|nuORF	45.9519527083369	0.2345902329052062	5				NaN	NaN	0	NaN	3050	3263	6313
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6316	21.656	NaN	1673.7	30	0	286.4	0.106	+			39021	SSSGTVLSK	9	48	433.23531077775095	864.4560686223019	2	433.2354736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSSGTVLSK_	ENSG00000145362|ENST00000357077|ANK2	77.31757898189308	0.1091473830098891	5				NaN	NaN	0	NaN	3051	3263	6313
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6317	21.658	NaN	1452.2	30	0	223.24	0.106	+			46399	VEMHHEAL	8	45	483.22877907138286	NaN	0	483.2285461425781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VEMHHEAL_	ENSG00000101210|ENST00000217182|EEF1A2;ENSG00000156508|ENST00000309268|EEF1A1;ENST00000395772.3_1_X:97645409-97645481:+|nuORF;ENST00000436459.2_1_9:135895553-135896258:+|nuORF;ENST00000447052.1_1_21:24762753-24763314:+|nuORF;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	50.0245360154114	1.7418937515398478	5				NaN	NaN	0	NaN	3052	3263	6313
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6318	21.66	NaN	19540	30	0	2254.7	0.106	+			6205	AVQRTLLEK	9	80	529.3211932007118	1056.6278334682236	2	529.8244018554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVQRTLLEK_	ENSG00000002586|ENST00000381192|CD99;ENST00000381177.6_1_X:2656215-2658842:+|nuORF;nc|ENSG00000292348|P14209-3|CD99	104.01359247289065	0.03510646158778409	5				NaN	NaN	0	NaN	3053	3263	6313
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6319	21.662	NaN	1638.2	30	0	508.01	0.034			+	9007	EGAEKGKVV	9	48	458.7581545129194	915.5017560926389	2	458.75860595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EGAEKGKVV_	REV__ENSG00000169896|ENST00000544665|ITGAM;REV__nc|ENSG00000169896|P11215-2|ITGAM	39.252832667884924	0.4290233611298554	5				NaN	NaN	0	NaN	3054	3263	6313
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6320	21.662	NaN	4614.8	30	0	1028.5	0.138	+			31674	QNIKAGEK	8	70	444.2510368865992	886.4875208399984	2	444.72802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QNIKAGEK_	ENSG00000054654|ENST00000555002|SYNE2;nc|ENSG00000054654|Q8WXH0|SYNE2;SYNE2|p.A5240Qfs*5|1|0.07|ENSG00000054654|chr14:64152639-64152639|G/-|frameshift_variant;SYNE2|p.D3074Ffs*8|1|0.07|ENSG00000054654|chr14:64053132-64053133|-/TTTCTTTTTCAAATACTTG|frameshift_variant;SYNE2|p.F2563Ifs*28|1|0.34|ENSG00000054654|chr14:64051593-64051594|-/A|frameshift_variant;SYNE2|p.F2840Lfs*3|1|0.38|ENSG00000054654|chr14:64052427-64052427|T/-|frameshift_variant;SYNE2|p.F4992Lfs*13|1|0.39|ENSG00000054654|chr14:64140067-64140067|T/-|frameshift_variant;SYNE2|p.K1189Sfs*4|1|0.35|ENSG00000054654|chr14:64000642-64000642|A/-|frameshift_variant;SYNE2|p.L5308Ifs*18|1|0.12|ENSG00000054654|chr14:64158750-64158751|GG/-|frameshift_variant;SYNE2|p.M1669Wfs*6|1|0.36|ENSG00000054654|chr14:64017707-64017707|A/-|frameshift_variant;SYNE2|p.N1656Mfs*19|1|0.18|ENSG00000054654|chr14:64017669-64017669|A/-|frameshift_variant;SYNE2|p.S1830Kfs*9|1|0.34|ENSG00000054654|chr14:64021985-64021986|-/A|frameshift_variant;SYNE2|p.S6651Rfs*83|1|0.29|ENSG00000054654|chr14:64220596-64220597|-/G|frameshift_variant	63.30626980617807	0.4690498839812213	5				NaN	NaN	0	NaN	3055	3263	6313
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6335	21.696	NaN	127860	30	0	25094	0.214	+			15228	GTSSVIVSR	9	77	453.25585224611723	904.4971515590345	2	453.255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTSSVIVSR_	ENSG00000072803|ENST00000517395|FBXW11;nc|ENSG00000072803|Q9UKB1-2|FBXW11;nc|ENSG00000072803|Q9UKB1-3|FBXW11;nc|ENSG00000072803|Q9UKB1|FBXW11	190.2614974402762	0.00026591377982909756	5				NaN	NaN	0	NaN	3067	3266	6334
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6336	21.699	NaN	231360	30	0	132240	0.106	+			6207	AVQRTLLEK	9	100	353.2169361453717	1056.628979036315	3	353.2169189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVQRTLLEK_	ENSG00000002586|ENST00000381192|CD99;ENST00000381177.6_1_X:2656215-2658842:+|nuORF;nc|ENSG00000292348|P14209-3|CD99	96.0336014099291	0.047854655524928534	5				NaN	NaN	0	NaN	3068	3266	6334
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6337	21.701	NaN	16253	30	0	5757.8	0.106			+	1633	AGNKKIEK	8	80	444.26899445375113	886.5234359743023	2	444.2688903808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AGNKKIEK_	REV__ENSG00000197386|ENST00000355072|HTT;REV__HTT|p.H2238Ffs*6|1|0.28|ENSG00000197386|chr4:3212643-3212644|CA/-|frameshift_variant;REV__HTT|p.N699Mfs*9|2|0.17|ENSG00000197386|chr4:3131390-3131390|A/-|frameshift_variant;REV__HTT|p.P1176Lfs*3|1|0.18|ENSG00000197386|chr4:3154316-3154316|C/-|frameshift_variant;REV__HTT|p.P2413Hfs*44|1|0.6|ENSG00000197386|chr4:3217944-3217944|C/-|frameshift_variant	115.45897859103373	0.24104770225811847	5				NaN	NaN	0	NaN	3069	3266	6334
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6338	21.703	NaN	4300.4	30	0	891.37	0.106				-1	EIVCLHWL	8	50	357.18896484375	NaN	0	357.18896484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_EIVC(Carbamidomethyl (C))LHWL_	nc|ENSG00000137494|Q8N9B4|ANKRD42	40.5726180659479	1.7418937515398478	5				NaN	NaN	0	NaN	3070	3266	6334
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6339	21.705	NaN	13556	30	0	8578	0.106	+			31616	QLYWSHPRK	9	61	405.5525314100158	1213.6357648302474	3	405.5524597167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QLYWSHPRK_	ENSG00000213741|ENST00000245458|RPS29;ENST00000554075.1_1_14:50052568-50053064:-|nuORF;ENST00000557367.2_1_14:50053001-50053064:-|nuORF;nc|ENSG00000213741|P62273-2|RPS29	42.396135135203025	0.392153681582562	5				NaN	NaN	0	NaN	3071	3266	6334
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6340	21.707	NaN	6853.7	30	0	906.83	0.034	+			7122	DAAKNQVAM	9	72	474.2333978560994	946.4522427789988	2	474.2342529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DAAKNQVAM_	ENSG00000109971|ENST00000534624|HSPA8;ENSG00000126803|ENST00000247207|HSPA2;ENSG00000204390|ENST00000375654|HSPA1L;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000531063.1_1_11:122931759-122932032:-|nuORF;ENST00000532167.5_1_11:122930938-122932032:-|nuORF;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;ENST00000533238.5_1_11:122929516-122932032:-|nuORF;HSPA2|p.G138Afs*8|3|0.33|ENSG00000126803|chr14:64541257-64541257|G/-|frameshift_variant;HSPA8|p.K569Dfs*6|1|0.3|ENSG00000109971|chr11:123058302-123058303|TC/-|frameshift_variant;nc|ENSG00000109971|P11142-2|HSPA8	69.6276240434122	0.14239879520340665	5				NaN	NaN	0	NaN	3072	3266	6334
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6341	21.707	NaN	2324.2	30	0	433.28	0.138				-1	KGGSGMKAP	9	52	437.7263183627659	873.4380837923318	2	437.7257385253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))KGGSGMKAP_	ABCC6|p.L780Wfs*31|1|0.44|ENSG00000091262|chr16:16178875-16178875|G/-|frameshift_variant;ABCC6|p.T285I|1|0.24|ENSG00000091262|chr16:16203554-16203554|G/A|missense_variant;ENSG00000091262|ENST00000205557|ABCC6;ENST00000574094.5_1_16:16275679-16317348:-|nuORF;nc|ENSG00000091262|O95255-3|ABCC6	29.14955571784316	0.5308295550522326	5				NaN	NaN	0	NaN	3073	3266	6334
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6359	21.745	NaN	9038.6	30	0	943.22	0.214			+	48661	VTSSKRLLQ	9	65	516.3136160313502	1030.6126791295003	2	516.3140258789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTSSKRLLQ_	REV__ENSG00000176771|ENST00000409261|NCKAP5	70.8162118820467	0.13725933411854815	5				NaN	NaN	0	NaN	3088	3269	6358
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6360	21.749	NaN	2583.3	30	0	406.91	0.106			+	43786	TLKPPNSSL	9	61	478.7734748223696	955.5323967115393	2	478.7738952636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TLKPPNSSL_	REV__SMARCA2|p.P1378S|1|0.36|ENSG00000080503|chr9:2161836-2161836|C/T|missense_variant	64.20726635412375	0.17854274437659667	5				NaN	NaN	0	NaN	3089	3269	6358
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6361	21.751	NaN	609.72	30	0	171.4	0.106				-1	 	0	25	335.20581362546335	668.3970743177267	2	335.2058410644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3090	3269	6358
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6362	21.753	NaN	947.82	30	0	140.87	0.036	+			16012	HASDQNYNY	9	39	556.2250079351708	1110.4354629371414	2	556.2257080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HASDQNYNY_	ENSG00000168813|ENST00000355898|ZNF507;ENST00000586664.1_1_19:32873361-32873986:+|nuORF;ZNF507|p.L875Sfs*7|1|0.15|ENSG00000168813|chr19:32382841-32382842|-/T|frameshift_variant	39.252832667884924	0.4290233611298554	5				NaN	NaN	0	NaN	3091	3269	6358
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6378	21.786	NaN	6855.2	30	0	1061.8	0.214	+			41830	SVSTHLITK	9	67	493.2871899804977	984.5598270277954	2	493.2872314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSTHLITK_	ENSG00000177873|ENST00000432264|ZNF619;ENST00000494154.6_1_3:40523704-40529729:+|nuORF;nc|ENSG00000177873|Q8N2I2-2|ZNF619;nc|ENSG00000177873|Q8N2I2-4|ZNF619;nc|ENSG00000177873|Q8N2I2|ZNF619	96.0336014099291	0.047854655524928534	5				NaN	NaN	0	NaN	3104	3272	6377
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6379	21.789	NaN	7000.8	30	0	679.17	0.106	+			4408	ATIDGSVNPK	10	60	501.26673147808407	1000.5189100229682	2	501.266357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATIDGSVNPK_	ENSG00000116830|ENST00000369466|TTF2;ENST00000463696.1_1_1:117637951-117640053:+|nuORF;ENST00000492682.5_1_1:117635418-117640830:+|nuORF;TTF2|p.K1134Efs*22|1|0.25|ENSG00000116830|chr1:117101426-117101427|-/A|frameshift_variant	104.01359247289065	0.06577755598965461	5				NaN	NaN	0	NaN	3105	3272	6377
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6380	21.791	NaN	2193.2	30	0	823.39	0.106			+	47657	VSCVQMGTR	9	52	490.73763487167065	NaN	0	490.73748779296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSCVQMGTR_	REV__ADAMTS2|p.R938C|1|0.38|ENSG00000087116|chr5:179125119-179125119|G/A|missense_variant	45.97224482568171	0.23445038899310136	5				NaN	NaN	0	NaN	3106	3272	6377
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6381	21.793	NaN	1997.7	30	0	162.9	0.106				-1	KNMFVFFL	8	57	531.2772878027585	1060.5400226723168	2	531.2779541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_KNM(Oxidation (M))FVFFL_	CLEC16A|p.L611Wfs*11|4|0.33|ENSG00000038532|chr16:11047302-11047302|T/-|frameshift_variant;CLEC16A|p.Y604Ifs*18|1|0.23|ENSG00000038532|chr16:11044063-11044063|T/-|frameshift_variant;ENSG00000038532|ENST00000409790|CLEC16A;nc|ENSG00000038532|Q2KHT3-2|CLEC16A	46.76643321282427	0.6143254112625767	5				NaN	NaN	0	NaN	3107	3272	6377
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6382	21.795	NaN	2321.1	30	0	810.87	0.106				-1	 	0	39	384.77209604529315	767.5296391573863	2	384.7718811035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3108	3272	6377
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6383	21.797	NaN	1193.8	30	0	175.94	0.106	+			12141	GAIEKTFTK	9	49	497.78163045196976	993.5487079707395	2	497.7814636230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GAIEKTFTK_	ENSG00000140006|ENST00000620954|WDR89	47.95952297671804	0.32689736945648856	5				NaN	NaN	0	NaN	3109	3272	6377
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6384	21.799	NaN	2877.5	30	0	553.27	0.037	+			47521	VQNGKHFKF	9	45	368.8694527455557	1103.586528836867	3	368.8685607910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VQNGKHFKF_	ENSG00000163586|ENST00000295834|FABP1	32.81241826257853	0.4965981579233955	5				NaN	NaN	0	NaN	3110	3272	6377
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6399	21.83	NaN	8599.2	30	0	1073.5	0.214	+			12462	GEDKGIKAL	9	72	465.7663342346782	929.5181155361564	2	465.7660217285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEDKGIKAL_	chr10:128113602-128116491|398|11.56|0.71|4.03|-|ENST00000368653|MKI67,MKI67;ENSG00000148773|ENST00000368654|MKI67;MKI67|p.R3036Yfs*27|1|0.04|ENSG00000148773|chr10:128102735-128102736|-/AAAATAA|frameshift_variant;nc|ENSG00000148773|P46013-2|MKI67	79.71258880314673	0.09879134589249085	5				NaN	NaN	0	NaN	3122	3275	6398
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6400	21.834	NaN	7085	30	0	791.94	0.106	+			19925	KEFEGKTL	8	57	476.2609214152734	950.5072898973468	2	476.2606506347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEFEGKTL_	ENSG00000080824|ENST00000216281|HSP90AA1;ENST00000378770.1_1_4:190394307-190396341:+|nuORF;ENST00000530115.1_1_11:27910903-27911533:-|nuORF;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000205100|Q58FG1|HSP90AA4P	90.36981228632155	0.27635063874291205	5				NaN	NaN	0	NaN	3123	3275	6398
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6401	21.836	NaN	3483.7	30	0	294.82	0.106	+			16178	HEALKENGVT	10	70	549.2826941674375	1096.550835401675	2	549.2833251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HEALKENGVT_	ENSG00000108828|ENST00000355653|VAT1;nc|ENSG00000108828|Q99536-2|VAT1;nc|ENSG00000108828|Q99536-3|VAT1	78.26377905018397	0.20980573808910843	5				NaN	NaN	0	NaN	3124	3275	6398
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6402	21.838	NaN	12601	30	0	2942.2	0.106	+			22316	KTFEGNLTTK	10	75	569.8085722545537	1137.6025915759074	2	569.8090209960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTFEGNLTTK_	ENSG00000174231|ENST00000304992|PRPF8	147.30332882356183	0.008974348998861759	5				NaN	NaN	0	NaN	3125	3275	6398
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6403	21.839	NaN	1869.1	30	0	153.77	0.106				-1	KNITLHCEA	9	59	543.2726177080114	NaN	0	543.272705078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_KNITLHC(Carbamidomethyl (C))EA_	CNTN3|p.K45N|1|0.07|ENSG00000113805|chr3:74499706-74499706|T/A|missense_variant	45.9519527083369	0.2345902329052062	5				NaN	NaN	0	NaN	3126	3275	6398
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6404	21.841	NaN	1686.9	30	0	601.28	0.043				-1	DQERLMRHRYL	11	44	511.59860105017884	NaN	0	511.5982971191406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_DQERLM(Oxidation (M))RHRYL_	ENSG00000188738|ENST00000424728|FSIP2;FSIP2|p.D5579Mfs*10|1|0.09|ENSG00000188738|chr2:185806029-185806029|A/-|frameshift_variant;FSIP2|p.K6152Rfs*27|1|0.43|ENSG00000188738|chr2:185807758-185807758|A/-|frameshift_variant;FSIP2|p.K6528Nfs*5|1|0.33|ENSG00000188738|chr2:185808884-185808884|A/-|frameshift_variant;FSIP2|p.V5734Yfs*24|2|0.23|ENSG00000188738|chr2:185806499-185806499|A/-|frameshift_variant;FSIP2|p.V6322*|1|0.42|ENSG00000188738|chr2:185808265-185808265|A/-|frameshift_variant;nc|ENSG00000188738|Q5CZC0-2|FSIP2	8.799314080144061	0.456735970842152	5				NaN	NaN	0	NaN	3127	3275	6398
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6405	21.842	NaN	780.24	30	0	81.567	0.141	+			25566	LQAFKNEVGV	10	44	552.8074340820312	NaN	0	552.8074340820312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LQAFKNEVGV_	ENSG00000157764|ENST00000646891|BRAF;ENST00000497784.1_2_7:140434399-140508041:-|nuORF	22.561587123415745	0.42010282974921537	5				NaN	NaN	0	NaN	3128	3275	6398
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6423	21.881	NaN	6009	30	0	2269.1	0.214	+			49018	VVGPVGCGK	9	44	408.2256303186088	814.4367077040176	2	408.2255554199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVGPVGCGK_	ABCC3|p.A658D|1|0.1|ENSG00000108846|chr17:50669175-50669175|C/A|missense_variant;ABCC3|p.L968Afs*31|1|0.33|ENSG00000108846|chr17:50675920-50675921|-/G|frameshift_variant;ENSG00000108846|ENST00000285238|ABCC3;ENST00000502426.5_1_17:48736553-48755440:+|nuORF;nc|ENSG00000108846|O15438-2|ABCC3;nc|ENSG00000108846|O15438-4|ABCC3	57.81127852772723	0.2318599694398087	5				NaN	NaN	0	NaN	3143	3278	6422
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6424	21.885	NaN	1864.2	30	0	157.48	0.106	+			16209	HECASINRI	9	54	550.2688351600226	1098.5231173868451	2	550.2698974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_HEC(Carbamidomethyl (C))ASINRI_	ENSG00000172531|ENST00000376745|PPP1CA;ENSG00000186298|ENST00000335007|PPP1CC;ENSG00000213639|ENST00000395366|PPP1CB;ENST00000526510.5_1_11:67166008-67168740:-|nuORF;ENST00000532446.5_1_11:67166008-67168991:-|nuORF;nc|ENSG00000172531|P62136-2|PPP1CA;nc|ENSG00000172531|P62136-3|PPP1CA;nc|ENSG00000186298|P36873-2|PPP1CC;PPP1CB|p.E217Rfs*3|1|0.29|ENSG00000213639|chr2:28788708-28788709|-/G|frameshift_variant	58.22992032128504	0.22837015374068087	5				NaN	NaN	0	NaN	3144	3278	6422
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6425	21.887	NaN	3118	30	0	324.26	0.106	+			46907	VISRAISVK	9	59	486.81362921941303	971.6127055056261	2	486.8133239746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VISRAISVK_	ENST00000530759.1_1_11:76155338-76155506:-|nuORF	70.8162118820467	0.13725933411854815	5				NaN	NaN	0	NaN	3145	3278	6422
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6426	21.888	NaN	927.98	30	0	94.26	0.106				-1	 	0	43	388.75501313738664	775.4954733415733	2	388.7549133300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3146	3278	6422
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6427	21.89	NaN	1375.1	30	0	433.94	0.106			+	32203	QSWGKQIVV	9	50	522.7948166647632	1043.5750803963263	2	522.7957763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QSWGKQIVV_	REV__ENST00000460297.1_1_16:448229-448523:+|nuORF	58.78195531508484	0.22376836668196862	5				NaN	NaN	0	NaN	3147	3278	6422
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6428	21.892	NaN	1494.9	30	0	165.74	0.037	+			10107	ESLPHLLFSP	10	45	380.54269070682045	NaN	0	380.2077941894531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ESLPHLLFSP_	nc|ENSG00000290684|A6NFC9|OR2W5P	40.05817265558897	0.3684561582319974	5				NaN	NaN	0	NaN	3148	3278	6422
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6429	21.893	NaN	2476.8	30	0	1105.9	0.141	+			24503	LGILVVRGDC	10	41	348.86590617264716	1043.5758891181415	3	348.8661804199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LGILVVRGDC_	ENSG00000157680|ENST00000614521|DGKI;nc|ENSG00000157680|O75912|DGKI	32.81241826257853	0.6118718159329168	5				NaN	NaN	0	NaN	3149	3278	6422
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6442	21.922	NaN	1541.4	30	0	125.82	0.214			+	21458	KNGDINKFT	9	54	518.7745119767098	1035.5344710202196	2	518.774658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KNGDINKFT_	REV__tr|U7STC4|U7STC4_FUSNUPhosphoribosylformylglycinamidinesynthaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01008PE=4SV=1	40.77816245573522	0.41113185337114944	5				NaN	NaN	0	NaN	3159	3281	6441
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6443	21.925	NaN	3166	30	0	379.52	0.106	+			38105	SPVNSSKQPSY	11	67	597.2930405085357	1192.5715280838713	2	597.2935180664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SPVNSSKQPSY_	ENSG00000159199|ENST00000393366|ATP5MC1;ENST00000502964.5_1_17:46971694-46973128:+|nuORF;ENST00000513781.5_1_17:46970480-46973128:+|nuORF	131.08727773389177	0.0012162201639963714	5				NaN	NaN	0	NaN	3160	3281	6441
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6444	21.927	NaN	2746.9	30	0	331.74	0.106	+			23335	KYSLVKNKI	9	61	546.8428453379287	NaN	0	546.8432006835938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KYSLVKNKI_	ENSG00000188643|ENST00000368706|S100A16;ENST00000474991.1_1_1:153580188-153585458:-|nuORF	65.46538089061403	0.1260090208616529	5				NaN	NaN	0	NaN	3161	3281	6441
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6445	21.929	NaN	6617.8	30	0	1860	0.106	+			48285	VTDPSIPIRKK	11	62	418.59053503319024	1252.7497756997707	3	418.5910339355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTDPSIPIRKK_	ELF4|p.A554Pfs*13|1|0.32|ENSG00000102034|chrX:130067053-130067053|C/-|frameshift_variant;ELF4|p.Q341Rfs*30|2|0.25|ENSG00000102034|chrX:130069466-130069466|G/-|frameshift_variant;ENSG00000102034|ENST00000308167|ELF4	48.601550744091256	0.44024757269956427	5				NaN	NaN	0	NaN	3162	3281	6441
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6446	21.931	NaN	2779.7	30	0	1010.8	0.106	+			7788	DPGLGLRL	8	47	420.7503123398015	839.486071746403	2	420.74981689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DPGLGLRL_	nc|ENSG00000211753|A0A5B6|TRBV28	50.0245360154114	0.5941082100236891	5				NaN	NaN	0	NaN	3163	3281	6441
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6447	21.933	NaN	2120.5	30	0	692.53	0.035	+			7541	DGVKKRKSS	9	30	335.5327695542876	1003.5764792630628	3	335.8668212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DGVKKRKSS_	ENSG00000070808|ENST00000671881|CAMK2A;ENST00000508662.5_1_5:149618053-149669203:-|nuORF;nc|ENSG00000145349|Q13557-11|CAMK2D;nc|ENSG00000145349|Q13557-3|CAMK2D;nc|ENSG00000145349|Q13557-9|CAMK2D	17.468008924990375	0.6112419832031292	5				NaN	NaN	0	NaN	3164	3281	6441
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6448	21.933	NaN	1215.3	30	0	307.98	0.14				-1	VTEPLMGGVP	10	39	508.2619157330844	NaN	0	508.26214599609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_VTEPLM(Oxidation (M))GGVP_	ENSG00000164889|ENST00000413384|SLC4A2;nc|ENSG00000164889|P04920-2|SLC4A2;nc|ENSG00000164889|P04920-3|SLC4A2	30.503639358989545	0.4000169810673414	5				NaN	NaN	0	NaN	3165	3281	6441
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6463	21.967	NaN	18584	30	0	2158.5	0.214	+			24209	LERKVESL	8	75	487.28735675549126	972.5601605777825	2	487.28717041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LERKVESL_	ENSG00000026025|ENST00000544301|VIM;ENST00000421459.2_2_10:17272631-17276850:+|nuORF	115.49404669440601	0.24099756539272307	5				NaN	NaN	0	NaN	3177	3284	6462
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6464	21.97	NaN	7364	30	0	764.51	0.106	+			37925	SPEDIKKAY	9	66	525.7768707094685	1049.539188485737	2	525.7774658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SPEDIKKAY_	DNAJB6|p.R24W|1|0.27|ENSG00000105993|chr7:157363165-157363165|C/T|missense_variant;DNAJB7|p.A14V|1|0.08|ENSG00000172404|chr22:40861954-40861954|G/A|missense_variant;DNAJB8|p.R24H|1|0.38|ENSG00000179407|chr3:128463175-128463175|C/T|missense_variant;ENSG00000105993|ENST00000262177|DNAJB6;ENSG00000172404|ENST00000307221|DNAJB7;ENSG00000179407|ENST00000319153|DNAJB8;ENST00000488001.5_1_7:157151266-157161444:+|nuORF;ENST00000526843.2_1_11:127810983-127811547:-|nuORF;nc|ENSG00000105993|O75190-2|DNAJB6;nc|ENSG00000105993|O75190-3|DNAJB6	152.06079943815163	0.00638878961959199	5				NaN	NaN	0	NaN	3178	3284	6462
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6465	21.972	NaN	7762.3	30	0	1651.2	0.106	+			12893	GESAVGKSSL	10	68	467.7457167757007	933.4768806182014	2	467.7453308105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GESAVGKSSL_	ENSG00000108774|ENST00000346213|RAB5C;ENSG00000111540|ENST00000360299|RAB5B;ENSG00000144566|ENST00000273047|RAB5A;ENST00000476544.1_1_3:19992384-19992582:+|nuORF;ENST00000546810.1_1_12:56367874-56383936:+|nuORF;ENST00000550013.1_1_17:40282343-40282577:-|nuORF;nc|ENSG00000108774|P51148-2|RAB5C;nc|ENSG00000111540|P61020-2|RAB5B;nc|ENSG00000144566|P20339-2|RAB5A	133.9934435666947	0.012355562819581703	5				NaN	NaN	0	NaN	3179	3284	6462
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6466	21.974	NaN	1794.5	30	0	317.39	0.106				-1	 	0	40	364.7383504038792	727.4621478745585	2	364.7381896972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3180	3284	6462
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6467	21.976	NaN	1365.1	30	0	147.25	0.106			+	-1	QPSDKIVMV	9	56	516.7728881835938	NaN	0	516.7728881835938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_QPSDKIVM(Oxidation (M))V_	REV__ENSG00000105141|ENST00000427043|CASP14	32.81241826257853	0.3119040447479903	5				NaN	NaN	0	NaN	3181	3284	6462
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6468	21.978	NaN	2929.9	30	0	940.94	0.036				-1	SARKSVMYI	9	37	357.52559421419477	NaN	0	357.525390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_SARKSVM(Oxidation (M))YI_	ENST00000398391.6_1_17:53077004-53077139:+|nuORF	32.81241826257853	0.3119040447479903	5				NaN	NaN	0	NaN	3182	3284	6462
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6469	21.978	NaN	1102.9	30	0	94.038	0.139	+			10219	ETGSRLVVV	9	53	480.27923583984375	NaN	0	480.27923583984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ETGSRLVVV_	L1MB7_dup19903|chr17:40875288-40875575:+|4.471230206686413|0.3704688365676228|3.59|475.0|1|1|sense	37.81151784470057	0.28666463014928195	5				NaN	NaN	0	NaN	3183	3284	6462
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6485	22.014	NaN	3489.1	30	0	555.78	0.214	+			4726	ATMEVKVGR	9	62	495.7733317511179	NaN	0	495.77349853515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATMEVKVGR_	ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1	75.04331003522576	0.0883683072398826	5				NaN	NaN	0	NaN	3196	3287	6484
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6486	22.017	NaN	2464.1	30	0	291.24	0.106	+			6206	AVQRTLLEK	9	68	529.3211932007118	1056.6278334682236	2	529.3225708007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVQRTLLEK_	ENSG00000002586|ENST00000381192|CD99;ENST00000381177.6_1_X:2656215-2658842:+|nuORF;nc|ENSG00000292348|P14209-3|CD99	72.87924865735499	0.12833875048249987	5				NaN	NaN	0	NaN	3197	3287	6484
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6487	22.019	NaN	3477.4	30	0	820.38	0.106	+			2460	APLKSKMIY	9	61	533.8016019473296	1065.588650961459	2	533.8018188476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_APLKSKM(Oxidation (M))IY_	ENSG00000125868|ENST00000246069|DSTN;ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65623104-65623215:-|nuORF;ENST00000602547.1_1_12:6994092-6994545:+|nuORF;nc|ENSG00000125868|P60981-2|DSTN;nc|ENSG00000165410|Q9Y281-3|CFL2	69.6276240434122	0.14239879520340665	5				NaN	NaN	0	NaN	3198	3287	6484
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6488	22.021	NaN	3306.1	30	0	1367.4	0.106			+	2132	ALKALYVGNR	10	43	368.8889389403351	1103.6449874212053	3	368.8890380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ALKALYVGNR_	REV__ENSG00000145703|ENST00000274364|IQGAP2;REV__IQGAP2|p.K608Nfs*42|1|0.36|ENSG00000145703|chr5:76637072-76637072|A/-|frameshift_variant;REV__IQGAP2|p.Q1499Rfs*15|1|0.05|ENSG00000145703|chr5:76701201-76701202|-/CCGAG|frameshift_variant;REV__IQGAP2|p.T881Hfs*2|2|0.3|ENSG00000145703|chr5:76665133-76665133|A/-|frameshift_variant	33.921630207806714	0.6028135429846169	5				NaN	NaN	0	NaN	3199	3287	6484
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6489	22.023	NaN	1843.2	30	0	554.99	0.106			+	43754	TLFLWSIK	8	59	504.2978538556821	NaN	0	504.2976989746094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TLFLWSIK_	REV__ENSG00000111181|ENST00000684302|SLC6A12	42.396135135203025	1.7418937515398478	5				NaN	NaN	0	NaN	3200	3287	6484
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6490	22.024	NaN	1425.6	30	0	588.35	0.034	+			51181	YPHATHDL	8	43	477.226617475669	NaN	0	477.2273864746094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YPHATHDL_	ENSG00000169564|ENST00000303577|PCBP1	60.29395666154354	1.7418937515398478	5				NaN	NaN	0	NaN	3201	3287	6484
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6491	22.025	NaN	1801	30	0	222.23	0.14	+			25873	LSFQGFLPQ	9	63	518.7745119767098	1035.5344710202196	2	519.2769775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSFQGFLPQ_	ENST00000308377.8_1_17:33679129-33679345:-|nuORF	32.81241826257853	0.4965981579233955	5				NaN	NaN	0	NaN	3202	3287	6484
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6505	22.057	NaN	3121	30	0	1144.9	0.214	+			37211	SKKAAHSL	8	53	421.2481211040828	840.4816892749657	2	421.6949768066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SKKAAHSL_	ENST00000358374.3_1_8:127085737-127086436:+|nuORF	19.996771675451527	0.7998311754834225	5				NaN	NaN	0	NaN	3213	3290	6504
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6506	22.06	NaN	2213.7	30	0	249.14	0.106			+	20496	KFCAEKKKH	9	67	559.809699187504	1117.6048454418078	2	560.3123779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KFCAEKKKH_	REV__ACVR2A|p.R438Efs*19|1|0.34|ENSG00000121989|chr2:147926116-147926117|-/A|frameshift_variant	49.44154591367651	0.3095138337212152	5				NaN	NaN	0	NaN	3214	3290	6504
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6507	22.062	NaN	1711.9	30	0	166.02	0.106	+			20841	KIIEVHVEK	9	55	547.8327823952277	NaN	0	547.83251953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KIIEVHVEK_	ENSG00000140403|ENST00000394852|DNAJA4;ENST00000485075.1_1_15:78562865-78566840:+|nuORF;nc|ENSG00000140403|Q8WW22-2|DNAJA4;nc|ENSG00000140403|Q8WW22-3|DNAJA4	81.52500206392136	0.06615817976141032	5				NaN	NaN	0	NaN	3215	3290	6504
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6508	22.064	NaN	1433.3	30	0	331.55	0.106	+			30190	PSLNREEV	8	53	472.244966376348	NaN	0	472.2456970214844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PSLNREEV_	ENSG00000107938|ENST00000356792|EDRF1;ENST00000419769.6_1_10:127430814-127452038:+|nuORF;ENST00000481600.5_1_10:127417653-127452038:+|nuORF;nc|ENSG00000107938|Q3B7T1-5|EDRF1	29.14955571784316	1.7418937515398478	5				NaN	NaN	0	NaN	3216	3290	6504
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6509	22.066	NaN	825.06	30	0	107.57	0.106			+	-1	AMELMCMGFA	10	35	568.2184448242188	NaN	0	568.2184448242188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Oxidation (M)	_AMELM(Oxidation (M))CM(Oxidation (M))GFA_	REV__ENSG00000060237|ENST00000315939|WNK1;REV__ENSG00000126562|ENST00000246914|WNK4;REV__ENSG00000165238|ENST00000427277|WNK2;REV__ENSG00000196632|ENST00000354646|WNK3;REV__nc|ENSG00000060237|Q9H4A3-2|WNK1;REV__nc|ENSG00000060237|Q9H4A3-5|WNK1;REV__nc|ENSG00000060237|Q9H4A3-6|WNK1;REV__nc|ENSG00000060237|Q9H4A3-7|WNK1;REV__nc|ENSG00000126562|Q96J92-2|WNK4;REV__nc|ENSG00000126562|Q96J92-3|WNK4;REV__nc|ENSG00000165238|Q9Y3S1-2|WNK2;REV__nc|ENSG00000165238|Q9Y3S1-3|WNK2;REV__nc|ENSG00000165238|Q9Y3S1-4|WNK2;REV__nc|ENSG00000165238|Q9Y3S1|WNK2;REV__nc|ENSG00000196632|Q9BYP7-2|WNK3;REV__nc|ENSG00000196632|Q9BYP7-3|WNK3;REV__nc|ENSG00000196632|Q9BYP7-4|WNK3;REV__WNK2|p.S1424Pfs*5|1|0.34|ENSG00000165238|chr9:93288908-93288908|C/-|frameshift_variant;REV__WNK2|p.T1980Lfs*12|2|0.16|ENSG00000165238|chr9:93297965-93297965|C/-|frameshift_variant;REV__WNK3|p.I1462Rfs*3|1|0.37|ENSG00000196632|chrX:54237181-54237182|-/TC|frameshift_variant;REV__WNK3|p.N1685Tfs*71|1|0.19|ENSG00000196632|chrX:54202010-54202010|T/-|frameshift_variant;REV__WNK3|p.R872Pfs*13|1|0.07|ENSG00000196632|chrX:54250092-54250093|-/AAAG|frameshift_variant;REV__WNK4|p.L778Sfs*157|1|0.58|ENSG00000126562|chr17:42794646-42794646|C/-|frameshift_variant;REV__WNK4|p.R467Afs*194|2|0.56|ENSG00000126562|chr17:42785399-42785399|G/-|frameshift_variant;REV__WNK4|p.S637Pfs*14|1|0.42|ENSG00000126562|chr17:42788172-42788173|TT/-|frameshift_variant;REV__WNK4|p.V1234*|1|0.28|ENSG00000126562|chr17:42796545-42796545|G/-|frameshift_variant;REV__WNK4|p.V608Cfs*53|4|0.4|ENSG00000126562|chr17:42787852-42787852|G/-|frameshift_variant	16.473147378115264	0.4201028297492154	5				NaN	NaN	0	NaN	3217	3290	6504
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6510	22.068	NaN	2885.1	30	0	485.28	0.106	+			36593	SGAQPILSK	9	54	450.7611975871542	899.5078422411084	2	450.7607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SGAQPILSK_	ENSG00000105355|ENST00000221957|PLIN3;nc|ENSG00000105355|O60664-3|PLIN3;nc|ENSG00000105355|O60664-4|PLIN3	61.76455937419982	0.19890525308472518	5				NaN	NaN	0	NaN	3218	3290	6504
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6511	22.069	NaN	1665	30	0	364.38	0.036				-1	APLKSKMIY	9	37	356.20378355722033	NaN	0	356.20367431640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_APLKSKM(Oxidation (M))IY_	ENSG00000125868|ENST00000246069|DSTN;ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65623104-65623215:-|nuORF;ENST00000602547.1_1_12:6994092-6994545:+|nuORF;nc|ENSG00000125868|P60981-2|DSTN;nc|ENSG00000165410|Q9Y281-3|CFL2	27.882242232435846	0.3367954786602879	5				NaN	NaN	0	NaN	3219	3290	6504
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6523	22.095	NaN	3958.9	30	0	2106	0.214	+			282	AAPATRAAL	9	53	421.2481211040828	840.4816892749657	2	421.2486572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAPATRAAL_	ENSG00000139370|ENST00000266771|SLC15A4	62.107414245175825	0.1960472003779324	5				NaN	NaN	0	NaN	3228	3293	6522
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6524	22.099	NaN	9935.1	30	0	5733	0.106	+			42730	TDHRKPLI	8	31	327.19409021806763	978.5604412544029	3	327.1943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TDHRKPLI_	ENSG00000133401|ENST00000438447|PDZD2;nc|ENSG00000133401|O15018-2|PDZD2;PDZD2|p.D2774Rfs*7|1|0.29|ENSG00000133401|chr5:32101201-32101202|-/G|frameshift_variant;PDZD2|p.E2629Kfs*37|1|0.23|ENSG00000133401|chr5:32097314-32097314|A/-|frameshift_variant;PDZD2|p.Q1921K|1|0.49|ENSG00000133401|chr5:32089209-32089209|C/A|missense_variant;PDZD2|p.S2770Gfs*12|1|0.04|ENSG00000133401|chr5:32101193-32101194|-/GGGT|frameshift_variant	18.324413293986947	0.7971860551947066	5				NaN	NaN	0	NaN	3229	3293	6522
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6525	22.101	NaN	2447.1	30	0	569.51	0.106			+	21511	KNNKKHVAR	9	52	365.55720346036674	1093.6497809813002	3	365.55743408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KNNKKHVAR_	REV__ENSG00000166268|ENST00000552032|MYRFL	24.20275056022122	0.577060078256802	5				NaN	NaN	0	NaN	3230	3293	6522
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6526	22.102	NaN	742.98	30	0	58.299	0.035	+			1049	AEKQFKSAL	9	50	511.2882385253906	NaN	0	511.2882385253906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEKQFKSAL_	ENSG00000165533|ENST00000380656|TTC8;nc|ENSG00000165533|Q8TAM2-3|TTC8;nc|ENSG00000165533|Q8TAM2|TTC8;TTC8|p.K269Rfs*38|1|0.08|ENSG00000165533|chr14:88857236-88857237|-/GGATGAATAG|frameshift_variant	40.05817265558897	0.275207446262312	5				NaN	NaN	0	NaN	3231	3293	6522
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6543	22.138	NaN	16891	30	0	7718.3	0.214	+			15468	GVADKILKK	9	49	324.54644390776014	970.6175023234805	3	324.54632568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVADKILKK_	ENSG00000123609|ENST00000243346|NMI	52.936696900407355	0.27249468807391813	5				NaN	NaN	0	NaN	3245	3296	6542
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6544	22.141	NaN	15920	30	0	2010.8	0.106	+			40366	STTTGHLIYK	10	75	560.8032682219394	1119.5919835106788	2	560.803955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STTTGHLIYK_	EEF1A1|p.P263Lfs*27|1|0.36|ENSG00000156508|chr6:73518595-73518595|G/-|frameshift_variant;EEF1A2|p.T239Hfs*50|1|0.26|ENSG00000101210|chr20:63493194-63493195|-/G|frameshift_variant;EEF1A2|p.T239Rfs*40|1|0.31|ENSG00000101210|chr20:63493195-63493195|G/-|frameshift_variant;ENSG00000101210|ENST00000217182|EEF1A2;ENSG00000156508|ENST00000309268|EEF1A1;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	109.47833844074708	0.04954876308859735	5				NaN	NaN	0	NaN	3246	3296	6542
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6545	22.143	NaN	2389.2	30	0	288.88	0.106			+	18903	IVLVATAKK	9	56	471.82064680869024	941.6267406841805	2	471.8204650878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IVLVATAKK_	REV__EIF2A|p.I537Sfs*4|1|0.78|ENSG00000144895|chr3:150581723-150581723|A/-|frameshift_variant;REV__EIF2A|p.Y349Hfs*7|1|0.06|ENSG00000144895|chr3:150572190-150572191|-/CATA|frameshift_variant;REV__ENSG00000144895|ENST00000460851|EIF2A;REV__nc|ENSG00000144895|Q9BY44-2|EIF2A;REV__nc|ENSG00000144895|Q9BY44-3|EIF2A;REV__nc|ENSG00000144895|Q9BY44-4|EIF2A	45.9519527083369	0.35044536499095585	5				NaN	NaN	0	NaN	3247	3296	6542
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6546	22.145	NaN	9435.4	30	0	4069.2	0.106	+			19276	KAFNQGKIFK	10	71	394.23270983508706	1179.6763001054612	3	394.23284912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KAFNQGKIFK_	ENSG00000254772|ENST00000329251|EEF1G;ENST00000526409.5_1_11:62327153-62342310:-|nuORF;nc|ENSG00000254772|P26641-2|EEF1G;NCEH1-EEF1G|1|fusion	56.72105179125745	0.3956618550748046	5				NaN	NaN	0	NaN	3248	3296	6542
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6547	22.147	NaN	4139.8	30	0	1419.5	0.106	+			39579	STGNMVISK	9	61	468.744619346263	NaN	0	468.7442321777344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STGNMVISK_	ENSG00000102837|ENST00000219022|OLFM4	112.2953585152457	0.007624231467206887	5				NaN	NaN	0	NaN	3249	3296	6542
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6548	22.149	NaN	2679.4	30	0	639.05	0.032	+			17883	IGAVSIKK	8	55	408.27103807514294	814.5275232170859	2	408.2710266113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IGAVSIKK_	ENSG00000186439|ENST00000334268|TRDN;TRDN|p.E519Gfs*9|1|0.07|ENSG00000186439|chr6:123278331-123278332|-/T|frameshift_variant;TRDN|p.E606Sfs*14|1|0.05|ENSG00000186439|chr6:123260627-123260628|-/CCAAAAGGCT|frameshift_variant;TRDN|p.T573Nfs*11|1|0.39|ENSG00000186439|chr6:123271141-123271142|-/T|frameshift_variant;TRDN|p.V538Cfs*8|1|0.28|ENSG00000186439|chr6:123273350-123273350|T/-|frameshift_variant	55.50420428727701	0.5462892107279674	5				NaN	NaN	0	NaN	3250	3296	6542
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6549	22.149	NaN	1481	30	0	294.13	0.14	+			37207	SKGLTSALSQ	10	42	496.2745287583401	990.5345045834803	2	496.2744445800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SKGLTSALSQ_	PI4KB|p.R270Gfs*14|1|0.35|ENSG00000143393|chr1:151315674-151315674|T/-|frameshift_variant	30.568863376406313	0.6301935916953115	5				NaN	NaN	0	NaN	3251	3296	6542
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6563	22.181	NaN	2432	30	0	331.32	0.214	+			46236	VEAVSGAAAAL	11	56	479.7637792952721	957.5130056573443	2	479.76348876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VEAVSGAAAAL_	ENST00000310441.11_1_X:153236792-153236924:-|nuORF	90.36981228632155	0.09726073920883954	5				NaN	NaN	0	NaN	3262	3299	6562
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6564	22.184	NaN	4849.8	30	0	1265.2	0.106	+			14209	GSSEPITVK	9	55	459.2503032629589	916.4860535927178	2	459.2498474121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSSEPITVK_	ENSG00000066044|ENST00000407627|ELAVL1;nc|ENSG00000066044|Q15717-2|ELAVL1	62.107414245175825	0.1960472003779324	5				NaN	NaN	0	NaN	3263	3299	6562
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6565	22.186	NaN	2155.8	30	0	446.19	0.106	+			24665	LGVHSKIT	8	45	427.7582413857899	853.5019298383799	2	427.758056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LGVHSKIT_	TRIM22|p.S376Tfs*3|1|0.09|ENSG00000132274|chr11:5709277-5709278|-/CATG|frameshift_variant	60.29395666154354	0.49887135096048313	5				NaN	NaN	0	NaN	3264	3299	6562
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6566	22.188	NaN	1848	30	0	297.18	0.106	+			17043	HPYQPDPKM	9	52	556.7637939453125	NaN	0	556.7637939453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HPYQPDPKM_	CBX4|p.E288Rfs*117|1|0.35|ENSG00000141582|chr17:79834780-79834780|C/-|frameshift_variant;CBX4|p.N231Tfs*3|2|0.38|ENSG00000141582|chr17:79834952-79834952|G/-|frameshift_variant;ENSG00000141582|ENST00000269397|CBX4	88.17693792209575	0.04527150213038833	5				NaN	NaN	0	NaN	3265	3299	6562
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6567	22.19	NaN	2253.8	30	0	611.84	0.106	+			15839	GWLHNKIR	8	34	341.86601253695585	1022.5762082110675	3	341.8659973144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GWLHNKIR_	ENSG00000126216|ENST00000261965|TUBGCP3;nc|ENSG00000126216|Q96CW5-2|TUBGCP3;nc|ENSG00000126216|Q96CW5-3|TUBGCP3;TUBGCP3|p.T308M|1|0.15|ENSG00000126216|chr13:112554100-112554100|G/A|missense_variant;TUBGCP3|p.T406Qfs*22|1|0.09|ENSG00000126216|chr13:112545818-112545818|T/-|frameshift_variant	20.481830146152948	0.8005983782650069	5				NaN	NaN	0	NaN	3266	3299	6562
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6568	22.192	NaN	769.2	30	0	64.343	0.106			+	26656	LVESLMTRKL	10	34	397.2373962402344	NaN	0	397.2373962402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LVESLMTRKL_	REV__ENSG00000276234|ENST00000615182|TADA2A;REV__nc|ENSG00000276234|O75478|TADA2A	16.71738777980365	0.4201028297492154	5				NaN	NaN	0	NaN	3267	3299	6562
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6569	22.193	NaN	1231	30	0	304.08	0.035			+	29504	PDIQKLVPD	9	50	512.7873174990187	NaN	0	512.787353515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PDIQKLVPD_	REV__ENSG00000135999|ENST00000258484|EPC2	38.80614096846853	0.28164298475537564	5				NaN	NaN	0	NaN	3268	3299	6562
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6585	22.226	NaN	6546	30	0	2515.9	0.214	+			10266	ETLPEEVG	8	59	437.2146658844257	872.4147788356514	2	437.2143859863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ETLPEEVG_	ENSG00000147874|ENST00000380502|HAUS6;nc|ENSG00000147874|Q7Z4H7-3|HAUS6	52.29916861842294	0.578018602984656	5				NaN	NaN	0	NaN	3281	3302	6584
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6586	22.23	NaN	6051.7	30	0	735.6	0.106	+			42441	TALPLGSSR	9	64	451.2570081252767	900.4994633173534	2	451.2582702636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TALPLGSSR_	ENST00000451963.1_2_7:99818046-99818860:+|nuORF;PVRIG|p.G79Afs*245|1|0.24|ENSG00000213413|chr7:100220225-100220225|G/-|frameshift_variant;PVRIG|p.T86Pfs*238|1|0.32|ENSG00000213413|chr7:100220245-100220245|G/-|frameshift_variant	56.72105179125745	0.24094814563026265	5				NaN	NaN	0	NaN	3282	3302	6584
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6587	22.232	NaN	3650.8	30	0	366.49	0.106	+			26490	LTLTKTIAN	9	64	487.7976356845285	973.580718435857	2	487.7977294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LTLTKTIAN_	nc|ENSG00000180953|Q9HBF5|ST20	69.6276240434122	0.14239879520340665	5				NaN	NaN	0	NaN	3283	3302	6584
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6588	22.234	NaN	1168.4	30	0	278.48	0.106			+	37862	SNPGKPAK	8	39	399.72713960680045	797.4397262804009	2	399.727294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SNPGKPAK_	REV__GTF3C2|p.G110Afs*20|1|0.38|ENSG00000115207|chr2:27343068-27343068|T/-|frameshift_variant	20.94693142431847	0.7975965917238792	5				NaN	NaN	0	NaN	3284	3302	6584
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6589	22.235	NaN	1143.8	30	0	116.1	0.106	+			25679	LRFQTVQPI	9	49	551.322308266691	1100.630063600182	2	551.3242797851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LRFQTVQPI_	CRB1|p.M520I|1|0.18|ENSG00000134376|chr1:197421388-197421388|G/A|missense_variant	31.529811441608018	0.5085848003137583	5				NaN	NaN	0	NaN	3285	3302	6584
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6590	22.237	NaN	3541.8	30	0	1364	0.039	+			34900	SAADLDNRFRK	11	43	431.5620236160338	1291.6642414483015	3	431.5626525878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SAADLDNRFRK_	ENSG00000169047|ENST00000305123|IRS1;IRS1|p.H598Tfs*38|3|0.31|ENSG00000169047|chr2:226796948-226796948|C/-|frameshift_variant	37.50817390946774	0.5920388381045607	5				NaN	NaN	0	NaN	3286	3302	6584
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6591	22.238	NaN	4539.7	30	0	1430.8	0.143				-1	GTLMWHQMK	9	44	388.5160512034304	1162.526324210491	3	388.5165710449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Oxidation (M)	_GTLM(Oxidation (M))WHQM(Oxidation (M))K_	ENST00000346169.6_1_3:184032401-184033585:+|nuORF;ENST00000352767.7_2_3:184032446-184033585:+|nuORF	37.81151784470057	0.4459294069877048	5				NaN	NaN	0	NaN	3287	3302	6584
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6605	22.269	NaN	6895.7	30	0	825.44	0.215			+	31526	QLIYRIQQ	8	73	531.3102245599134	1060.6058961866268	2	531.3108520507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QLIYRIQQ_	REV__ENSG00000124429|ENST00000262753|POF1B;REV__nc|ENSG00000124429|Q8WVV4-1|POF1B	76.84663266511073	0.3498490246073164	5				NaN	NaN	0	NaN	3298	3305	6604
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6606	22.273	NaN	4793.2	30	0	1539.1	0.106			+	-1	STIMFHITVH	10	50	401.2045332667416	1200.5917704004248	3	401.20452880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_STIM(Oxidation (M))FHITVH_	REV__ENSG00000198795|ENST00000361524|ZNF521;REV__ZNF521|p.G1058Afs*24|1|0.28|ENSG00000198795|chr18:25224745-25224745|C/-|frameshift_variant;REV__ZNF521|p.T1305*|1|0.14|ENSG00000198795|chr18:25062735-25062736|-/TA|frameshift_variant	49.536043120802724	0.461275219792494	5				NaN	NaN	0	NaN	3299	3305	6604
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6607	22.275	NaN	1232.9	30	0	258.99	0.106	+			30558	QALRENTY	8	49	497.7506103515625	NaN	0	497.7506103515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QALRENTY_	ENSG00000113194|ENST00000261942|FAF2;ENST00000513627.1_1_5:175921035-175923719:+|nuORF	51.33545320467046	1.7418937515398478	5				NaN	NaN	0	NaN	3300	3305	6604
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6608	22.277	NaN	3237.6	30	0	945.88	0.106	+			7956	DSPAGKTNAL	10	56	487.2510134757403	972.4874740182806	2	487.2509460449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DSPAGKTNAL_	ENSG00000132849|ENST00000642238|PATJ;ENST00000459752.5_1_1:62228564-62579919:+|nuORF;ENST00000484562.5_1_1:62228564-62579919:+|nuORF;nc|ENSG00000132849|Q8NI35-2|PATJ;nc|ENSG00000132849|Q8NI35-3|PATJ;nc|ENSG00000132849|Q8NI35-4|PATJ;nc|ENSG00000132849|Q8NI35-5|PATJ;nc|ENSG00000132849|Q8NI35|PATJ	48.601550744091256	0.46988609897316763	5				NaN	NaN	0	NaN	3301	3305	6604
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6609	22.278	NaN	1267.7	30	0	114.15	0.106	+			7787	DPFSFAGPEI	10	59	540.256452380273	1078.498351827346	2	540.8153076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DPFSFAGPEI_	ENST00000319092.5_1_1:117075690-117076050:-|nuORF	49.44154591367651	0.46214596422418036	5				NaN	NaN	0	NaN	3302	3305	6604
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6610	22.28	NaN	691.56	30	0	64.956	0.048				-1	 	0	33	618.9391562782646	1853.7956394349935	3	618.6046142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3303	3305	6604
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6611	22.281	NaN	1578.3	30	0	483.77	0.144			+	29505	PDKRPLRAQ	9	42	360.87945556640625	NaN	0	360.87945556640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PDKRPLRAQ_	REV__ENSG00000100106|ENST00000644935|TRIOBP;REV__nc|ENSG00000100106|Q9H2D6-2|TRIOBP;REV__nc|ENSG00000100106|Q9H2D6-3|TRIOBP;REV__TRIOBP|p.L1770Qfs*47|1|0.09|ENSG00000100106|chr22:37741018-37741019|-/AGTGT|frameshift_variant	32.81241826257853	0.3119040447479903	5				NaN	NaN	0	NaN	3304	3305	6604
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6626	22.315	NaN	7155.8	30	0	3334.8	0.214	+			46170	VDVHRVSL	8	54	462.76692858080605	923.5193042284121	2	462.7668762207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VDVHRVSL_	ENST00000425128.6_1_3:27417698-27417842:-|nuORF	40.77816245573522	0.6514838689002179	5				NaN	NaN	0	NaN	3316	3308	6625
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6627	22.318	NaN	3537	30	0	596.58	0.106	+			33155	RESTGAQVQV	10	54	537.7808810468424	1073.5472091604847	2	537.7819213867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RESTGAQVQV_	ENSG00000169564|ENST00000303577|PCBP1;ENSG00000183570|ENST00000681687|PCBP3;ENSG00000197111|ENST00000546463|PCBP2;ENST00000468429.5_1_21:47321003-47359956:+|nuORF;ENST00000547717.1_1_12:53848575-53861193:+|nuORF;nc|ENSG00000183570|P57721-2|PCBP3;nc|ENSG00000183570|P57721-3|PCBP3;nc|ENSG00000183570|P57721-4|PCBP3;nc|ENSG00000183570|P57721-5|PCBP3;nc|ENSG00000197111|Q15366-2|PCBP2;nc|ENSG00000197111|Q15366-4|PCBP2;nc|ENSG00000197111|Q15366-5|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;nc|ENSG00000197111|Q15366-7|PCBP2;nc|ENSG00000197111|Q15366-8|PCBP2;nc|ENSG00000197111|Q15366|PCBP2;PCBP2|p.T202Kfs*26|1|0.32|ENSG00000197111|chr12:53464773-53464773|C/-|frameshift_variant	54.722347961057174	0.4138398245444204	5				NaN	NaN	0	NaN	3317	3308	6625
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6628	22.32	NaN	10258	30	0	2356.1	0.106			+	38296	SQTKGLMNA	9	75	475.24206289784695	948.4695728624939	2	475.24237060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SQTKGLMNA_	REV__ENSG00000170871|ENST00000307659|KIAA0232;REV__KIAA0232|p.T785Nfs*3|1|0.28|ENSG00000170871|chr4:6862728-6862729|-/A|frameshift_variant	107.00750918261382	0.032051501805654005	5				NaN	NaN	0	NaN	3318	3308	6625
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6629	22.322	NaN	4668.7	30	0	760.65	0.106	+			45673	VAAAESHPL	9	62	447.73767954486533	893.4608061565307	2	447.7377014160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VAAAESHPL_	ENST00000416120.1_1_6:64259201-64259360:-|nuORF;ENST00000489392.1_1_9:136216448-136216496:+|nuORF	106.41520541750704	0.03265588207292361	5				NaN	NaN	0	NaN	3319	3308	6625
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6630	22.324	NaN	1123.4	30	0	265.75	0.106	+			38794	SSMSTALSK	9	38	456.22870689545516	910.4428608577103	2	456.2288513183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSMSTALSK_	nc|ENSG00000138119|Q9NZM1-3|MYOF	58.22992032128504	0.22837015374068087	5				NaN	NaN	0	NaN	3320	3308	6625
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6631	22.326	NaN	1799.7	30	0	253.76	0.039			+	46685	VGHYQIDMDR	10	43	411.8620523236625	1232.5643275711875	3	411.8620910644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VGHYQIDMDR_	REV__ENSG00000188716|ENST00000338487|DUSP29	26.063383197487333	0.6669871633831898	5				NaN	NaN	0	NaN	3321	3308	6625
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6632	22.326	NaN	5383.9	30	0	1198.5	0.141				-1	QQQMAELHS	9	56	363.16527524736335	1086.47399634229	3	363.1655578613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_QQQM(Oxidation (M))AELHS_	ENSG00000125844|ENST00000377813|RRBP1;nc|ENSG00000125844|Q9P2E9-3|RRBP1;RRBP1|p.A628Gfs*69|1|0.35|ENSG00000125844|chr20:17621915-17621916|-/T|frameshift_variant	29.170058357718403	0.5306379469863586	5				NaN	NaN	0	NaN	3322	3308	6625
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6645	22.355	NaN	9247.4	30	0	921.74	0.214	+			1769	AIASTLVHK	9	67	470.28472887537583	938.5549048175517	2	470.2845153808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AIASTLVHK_	ENSG00000090060|ENST00000216277|PAPOLA;nc|ENSG00000090060|P51003-2|PAPOLA	93.19546047674547	0.05585629608842056	5				NaN	NaN	0	NaN	3332	3311	6644
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6646	22.359	NaN	5939.6	30	0	3662.6	0.106			+	-1	AKVCRLCK	8	36	345.52447608587664	1033.55159885783	3	345.524658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_AKVC(Carbamidomethyl (C))RLC(Carbamidomethyl (C))K_	REV__ENST00000367161.7_1_1:205116358-205116508:-|nuORF	21.9598887501803	0.7897753010812679	5				NaN	NaN	0	NaN	3333	3311	6644
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6647	22.361	NaN	2581.3	30	0	559.23	0.106	+			35319	SAMSNPRAM	9	50	482.72013103618076	963.4257091391615	2	482.7204284667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAMSNPRAM_	ENSG00000135018|ENST00000376395|UBQLN1;ENSG00000188021|ENST00000338222|UBQLN2;nc|ENSG00000135018|Q9UMX0-2|UBQLN1;nc|ENSG00000135018|Q9UMX0-3|UBQLN1;UBQLN2|p.P525Lfs*71|10|0.37|ENSG00000188021|chrX:56565441-56565441|C/-|frameshift_variant	53.08895987439943	0.27122541748218487	5				NaN	NaN	0	NaN	3334	3311	6644
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6648	22.363	NaN	2034.6	30	0	184.11	0.106			+	33132	REQTIAKIS	9	59	523.3037920060438	1044.5930310788874	2	523.3043823242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_REQTIAKIS_	REV__ENST00000438300.1_1_2:133070568-133076306:+|nuORF	51.19269402634007	0.2889735674168909	5				NaN	NaN	0	NaN	3335	3311	6644
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6649	22.365	NaN	1662.5	30	0	226.81	0.106	+			46427	VERGPDEAM	9	54	502.22893518541963	1002.4433174376393	2	502.2294616699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VERGPDEAM_	ENSG00000024422|ENST00000263277|EHD2;ENST00000540884.1_1_19:48232905-48244686:+|nuORF;nc|ENSG00000024422|Q9NZN4-2|EHD2	45.97224482568171	0.3502073465782774	5				NaN	NaN	0	NaN	3336	3311	6644
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6650	22.366	NaN	1023.3	30	0	92.626	0.036	+			7186	DAHGNHLAEE	10	50	546.73876953125	NaN	0	546.73876953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DAHGNHLAEE_	ENSG00000122483|ENST00000690025|CCDC18;nc|ENSG00000122483|Q5T9S5-2|CCDC18;nc|ENSG00000122483|Q5T9S5|CCDC18	25.57405402267927	0.4162033004763879	5				NaN	NaN	0	NaN	3337	3311	6644
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6651	22.367	NaN	2784.4	30	0	223.75	0.141	+			36383	SETHKAIQAL	10	69	549.3010900999298	1096.5876272666594	2	549.3013305664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SETHKAIQAL_	ENSG00000179950|ENST00000526683|PUF60;nc|ENSG00000179950|Q9UHX1-2|PUF60;nc|ENSG00000179950|Q9UHX1-3|PUF60;nc|ENSG00000179950|Q9UHX1-4|PUF60;nc|ENSG00000179950|Q9UHX1-5|PUF60;nc|ENSG00000179950|Q9UHX1-6|PUF60	82.83050618871818	0.17249597090446123	5				NaN	NaN	0	NaN	3338	3311	6644
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6666	22.4	NaN	6199.1	30	0	793.27	0.214	+			35301	SAMERICEK	9	68	533.7542276716272	1065.4939024100543	2	533.7549438476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAMERICEK_	ENSG00000169710|ENST00000306749|FASN;FASN|p.A2037V|1|0.35|ENSG00000169710|chr17:82082062-82082062|G/A|missense_variant;FASN|p.R2049Q|1|0.55|ENSG00000169710|chr17:82082026-82082026|C/T|missense_variant	122.93914200107957	0.019420478173996256	5				NaN	NaN	0	NaN	3350	3314	6665
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6667	22.404	NaN	4169.5	30	0	919.61	0.106	+			40999	SVGQTVITK	9	66	466.7741482840512	931.5337436349024	2	466.7738037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVGQTVITK_	ENSG00000107077|ENST00000381309|KDM4C;nc|ENSG00000293552|Q9H3R0-2|KDM4C	70.8162118820467	0.13725933411854815	5				NaN	NaN	0	NaN	3351	3314	6665
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6668	22.406	NaN	3466.3	30	0	750.24	0.106			+	-1	SSNNGICLLL	10	51	364.1890137609648	NaN	0	364.18896484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SSNNGIC(Carbamidomethyl (C))LLL_	REV__ENSG00000187715|ENST00000405109|KBTBD12	40.05817265558897	0.3684561582319974	5				NaN	NaN	0	NaN	3352	3314	6665
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6669	22.408	NaN	5621.5	30	0	1984.5	0.106			+	45700	VAAKHIKQLE	10	38	379.5644169855267	1135.6714215567802	3	379.5643615722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VAAKHIKQLE_	REV__ENST00000344693.5_1_21:15326407-15352225:-|nuORF;REV__ENST00000581181.5_1_18:14179393-14187439:+|nuORF;REV__ENST00000581935.5_1_18:14179393-14184104:+|nuORF;REV__nc|ENSG00000290972|A0PJZ0|ANKRD20A5P	28.081489160057373	0.6505064946289502	5				NaN	NaN	0	NaN	3353	3314	6665
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6670	22.41	NaN	2159.4	30	0	1102.4	0.106	+			41459	SVNNPILRK	9	34	347.5451619325014	1039.6136563977043	3	347.5451354980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVNNPILRK_	ENSG00000089022|ENST00000550735|MAPKAPK5;nc|ENSG00000089022|Q8IW41|MAPKAPK5	39.252832667884924	0.4290233611298554	5				NaN	NaN	0	NaN	3354	3314	6665
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6671	22.411	NaN	7119.6	30	0	2495.2	0.035	+			47032	VLCPPPVKK	9	43	327.5367370479197	979.5883817439592	3	327.5367736816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VLCPPPVKK_	ENSG00000136238|ENST00000348035|RAC1;ENSG00000169750|ENST00000306897|RAC3;ENST00000419413.1_1_X:136523419-136523611:-|nuORF;ENST00000488373.5_1_7:6415539-6442074:+|nuORF;nc|ENSG00000136238|P63000-2|RAC1	58.78195531508484	0.22376836668196862	5				NaN	NaN	0	NaN	3355	3314	6665
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6672	22.412	NaN	3756.5	30	0	1167.3	0.14	+			43400	TGHWVDEVG	9	50	500.2291651056123	998.4437772780246	2	500.2289123535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TGHWVDEVG_	ENSG00000095564|ENST00000265990|BTAF1;nc|ENSG00000095564|O14981-2|BTAF1	30.503639358989545	0.5181749237905803	5				NaN	NaN	0	NaN	3356	3314	6665
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6688	22.447	NaN	18525	30	0	9777.9	0.214	+			32341	QTVQGTFSK	9	72	498.2613442132751	994.5081354933502	2	498.2612609863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QTVQGTFSK_	ENSG00000188112|ENST00000341865|C6orf132;nc|nan|Q5T0Z8-2|C6orf132;nc|nan|Q5T0Z8-4|C6orf132	81.52500206392136	0.09095445986635249	5				NaN	NaN	0	NaN	3369	3317	6687
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6689	22.451	NaN	2142.1	30	0	166.65	0.106	+			21269	KLNEVIVNK	9	60	528.8245394817266	NaN	0	528.8245239257812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KLNEVIVNK_	ENSG00000140199|ENST00000354181|SLC12A6;nc|ENSG00000140199|Q9UHW9-2|SLC12A6;nc|ENSG00000140199|Q9UHW9-3|SLC12A6;nc|ENSG00000140199|Q9UHW9-4|SLC12A6;nc|ENSG00000140199|Q9UHW9-5|SLC12A6;nc|ENSG00000140199|Q9UHW9-6|SLC12A6	80.45461616416974	0.0698259577396595	5				NaN	NaN	0	NaN	3370	3317	6687
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6690	22.453	NaN	7632.6	30	0	692.51	0.106	+			33256	RGESKVQIPS	10	69	550.8063259865684	1099.5980990399366	2	550.806884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RGESKVQIPS_	ENST00000592670.5_1_17:40912585-40912720:-|nuORF	75.04331003522576	0.23611669241777622	5				NaN	NaN	0	NaN	3371	3317	6687
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6691	22.454	NaN	2149.3	30	0	449.07	0.106	+			16040	HAVGPSTAM	9	40	435.7106077184886	869.4066625037772	2	435.7101745605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HAVGPSTAM_	ENSG00000196628|ENST00000354452|TCF4;ENST00000562680.5_1_18:52899738-53018213:-|nuORF;nc|ENSG00000196628|P15884-10|TCF4;nc|ENSG00000196628|P15884-11|TCF4;nc|ENSG00000196628|P15884-12|TCF4;nc|ENSG00000196628|P15884-13|TCF4;nc|ENSG00000196628|P15884-14|TCF4;nc|ENSG00000196628|P15884-15|TCF4;nc|ENSG00000196628|P15884-16|TCF4;nc|ENSG00000196628|P15884-2|TCF4;nc|ENSG00000196628|P15884-4|TCF4;nc|ENSG00000196628|P15884-5|TCF4;nc|ENSG00000196628|P15884-6|TCF4;nc|ENSG00000196628|P15884-7|TCF4;nc|ENSG00000196628|P15884-8|TCF4;nc|ENSG00000196628|P15884-9|TCF4;nc|ENSG00000196628|P15884|TCF4;TCF4|p.R401W|1|0.08|ENSG00000196628|chr18:55254646-55254646|G/A|missense_variant	57.81127852772723	0.2318599694398087	5				NaN	NaN	0	NaN	3372	3317	6687
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6692	22.456	NaN	2793.3	30	0	355.19	0.106	+			3385	ASQCGSLIGK	10	66	510.7608216391478	NaN	0	510.7608337402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_ASQC(Carbamidomethyl (C))GSLIGK_	ENSG00000090097|ENST00000461554|PCBP4;ENSG00000183570|ENST00000681687|PCBP3;ENSG00000197111|ENST00000546463|PCBP2;ENST00000468429.5_1_21:47321003-47359956:+|nuORF;ENST00000492809.5_1_3:51992079-51994784:-|nuORF;ENST00000497390.5_1_3:51992079-51994784:-|nuORF;ENST00000547717.1_1_12:53848575-53861193:+|nuORF;ENST00000548190.1_1_12:53849722-53854210:+|nuORF;nc|ENSG00000090097|P57723-2|PCBP4;nc|ENSG00000183570|P57721-2|PCBP3;nc|ENSG00000183570|P57721-3|PCBP3;nc|ENSG00000183570|P57721-4|PCBP3;nc|ENSG00000183570|P57721-5|PCBP3;nc|ENSG00000197111|Q15366-2|PCBP2;nc|ENSG00000197111|Q15366-4|PCBP2;nc|ENSG00000197111|Q15366-5|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;nc|ENSG00000197111|Q15366-7|PCBP2;nc|ENSG00000197111|Q15366-8|PCBP2;nc|ENSG00000197111|Q15366|PCBP2;PCBP2|p.T202Kfs*26|1|0.32|ENSG00000197111|chr12:53464773-53464773|C/-|frameshift_variant;PCBP4|p.G203Efs*11|1|0.1|ENSG00000090097|chr3:51959397-51959398|-/CTCT|frameshift_variant	58.2462437865262	0.2485996375737153	5				NaN	NaN	0	NaN	3373	3317	6687
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6693	22.458	NaN	4198.9	30	0	458.24	0.035	+			36329	SESQEGHVL	9	65	493.23260960064016	984.4506662680803	2	493.232666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SESQEGHVL_	ENSG00000172818|ENST00000335987|OVOL1	58.22992032128504	0.22837015374068087	5				NaN	NaN	0	NaN	3374	3317	6687
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6694	22.459	NaN	984.25	30	0	70.873	0.141	+			10201	ETEPVYERA	9	48	547.2625540094267	1092.5105550856533	2	547.2631225585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ETEPVYERA_	ENSG00000162086|ENST00000669516|ZNF75A;ENST00000498240.6_1_16:3358428-3366938:+|nuORF;ENST00000571101.5_1_16:3355511-3366938:+|nuORF	26.69291269510374	0.5537881896960711	5				NaN	NaN	0	NaN	3375	3317	6687
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6712	22.498	NaN	4900.2	30	0	964.3	0.214			+	18648	ISTSLGPKS	9	57	445.2530825706379	888.4916122080758	2	445.25286865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ISTSLGPKS_	REV__ENSG00000170948|ENST00000595891|MBD3L1	47.657333605630114	0.33044192980041115	5				NaN	NaN	0	NaN	3390	3320	6711
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6713	22.502	NaN	2369.1	30	0	262.5	0.106			+	-1	KQMKCNKK	8	73	532.7869475687936	1063.5593422043871	2	532.7872314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_KQMKC(Carbamidomethyl (C))NKK_	REV__CNTLN|p.I1388Nfs*3|1|0.3|ENSG00000044459|chr9:17502587-17502588|-/A|frameshift_variant;REV__CNTLN|p.K1130Rfs*14|1|0.25|ENSG00000044459|chr9:17462996-17462996|A/-|frameshift_variant;REV__CNTLN|p.M1308*|1|0.36|ENSG00000044459|chr9:17484355-17484355|A/-|frameshift_variant;REV__CNTLN|p.M1308Nfs*9|1|0.46|ENSG00000044459|chr9:17484354-17484355|-/A|frameshift_variant;REV__CNTLN|p.T1324Dfs*27|1|0.14|ENSG00000044459|chr9:17484406-17484407|-/A|frameshift_variant;REV__ENSG00000044459|ENST00000380647|CNTLN;REV__nc|ENSG00000044459|Q9NXG0|CNTLN	57.81127852772723	0.5234495074909924	5				NaN	NaN	0	NaN	3391	3320	6711
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6714	22.504	NaN	2447.9	30	0	800.52	0.106	+			5026	ATSDMDIGK	9	55	469.21848865330213	936.4224243734043	2	469.2178649902344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATSDMDIGK_	ENSG00000102158|ENST00000618282|MAGT1	47.657333605630114	0.33044192980041115	5				NaN	NaN	0	NaN	3392	3320	6711
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6715	22.505	NaN	8865.6	30	0	1246.7	0.106	+			37053	SIRVTQKSYK	10	68	417.9067070181407	1250.6982916546222	3	418.24114990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SIRVTQKSYK_	CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000550170.5_1_12:53294858-53298765:-|nuORF;KRT8|p.R18Gfs*56|1|0.24|ENSG00000170421|chr12:52904930-52904930|G/-|frameshift_variant;nc|ENSG00000170421|P05787-2|KRT8	70.39856735676683	0.27406383984062843	5				NaN	NaN	0	NaN	3393	3320	6711
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6716	22.507	NaN	7122	30	0	1949.4	0.106	+			37663	SLQVRLELA	9	42	343.5414079883731	1027.6023945653194	3	343.5413513183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SLQVRLELA_	ENSG00000177830|ENST00000323578|CHID1;nc|ENSG00000177830|Q9BWS9-2|CHID1;nc|ENSG00000177830|Q9BWS9-3|CHID1	54.776311868738084	0.25715957988447635	5				NaN	NaN	0	NaN	3394	3320	6711
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6717	22.509	NaN	2964.2	30	0	698.85	0.032	+			12293	GCGGPLVGK	9	51	394.2100556383855	786.405558343571	2	394.2101135253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GCGGPLVGK_	ENST00000331889.10_1_3:32726697-32726778:+|nuORF	40.5726180659479	0.4135428067754104	5				NaN	NaN	0	NaN	3395	3320	6711
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6718	22.509	NaN	3426.7	30	0	430.23	0.142	+			11528	FPEEDKKTY	9	63	578.7797335761007	1155.5449142190014	2	578.7797241210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FPEEDKKTY_	ENSG00000151366|ENST00000281031|NDUFC2;nc|ENSG00000151366|O95298-2|NDUFC2	154.1183686248401	0.005909203230691971	5				NaN	NaN	0	NaN	3396	3320	6711
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6731	22.539	NaN	11886	30	0	1838.6	0.214	+			15044	GTNPGIITK	9	65	450.7609207026941	899.5072884721882	2	450.7608337402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTNPGIITK_	ENSG00000136247|ENST00000335965|ZDHHC4;ENST00000474097.5_1_7:6620192-6623202:+|nuORF	120.30596017624542	0.02101454110788768	5				NaN	NaN	0	NaN	3406	3323	6730
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6732	22.542	NaN	12169	30	0	1288.9	0.106	+			45736	VADPETRTV	9	75	494.2585564839777	986.5025600347554	2	494.2588195800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VADPETRTV_	ENSG00000039650|ENST00000322344|PNKP;ENST00000593946.5_1_19:50364507-50370327:-|nuORF;ENST00000594661.5_1_19:50367579-50369988:-|nuORF;ENST00000595792.1_1_19:50369586-50370764:-|nuORF;nc|ENSG00000039650|Q96T60-2|PNKP	56.632244143249146	0.24168844994051353	5				NaN	NaN	0	NaN	3407	3323	6730
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6733	22.544	NaN	3838.6	30	0	311.35	0.106	+			1616	AGMALGIQK	9	52	452.74956962229936	NaN	0	452.7495422363281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_AGM(Oxidation (M))ALGIQK_	ENSG00000174851|ENST00000376901|YIF1A	106.41520541750704	0.01293449659060185	5				NaN	NaN	0	NaN	3408	3323	6730
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6734	22.546	NaN	7992.8	30	0	2384.7	0.106	+			16924	HPLSDHEATL	10	66	560.274912543106	1118.5352721530119	2	560.2760620117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HPLSDHEATL_	ENSG00000204525|ENST00000376228|HLA-C;ENST00000487245.5_1_6:31236948-31239147:-|nuORF;HLA-C|p.A269Gfs*66|1|0.07|ENSG00000204525|chr6:31270299-31270300|-/C|frameshift_variant;nc|ENSG00000204525|P10321-2|HLA-C	82.24051045832904	0.17731618517892733	5				NaN	NaN	0	NaN	3409	3323	6730
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6735	22.548	NaN	2849.9	30	0	313.3	0.106			+	21050	KKKSNIIQQ	9	67	543.8351678584477	1085.6557827836953	2	543.8358764648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KKKSNIIQQ_	REV__ENSG00000186017|ENST00000452939|ZNF566;REV__nc|ENSG00000186017|Q969W8-2|ZNF566	82.7504851949679	0.08565546331141553	5				NaN	NaN	0	NaN	3410	3323	6730
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6736	22.55	NaN	3864.1	30	0	443.33	0.036	+			20354	KESEIKKLV	9	72	537.3320967287681	1072.649640524336	2	537.332763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KESEIKKLV_	tr|U7T8A7|U7T8A7_FUSNUPTSsystem,N-acetylglucosamine-specificIIBCcomponentOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00177PE=4SV=1	51.19269402634007	0.2889735674168909	5				NaN	NaN	0	NaN	3411	3323	6730
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6737	22.55	NaN	2250.8	30	0	316.67	0.139	+			50424	YAATSRQL	8	48	455.2426213511791	908.4706897691582	2	455.242919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YAATSRQL_	ENSG00000108846|ENST00000285238|ABCC3;ENST00000502426.5_1_17:48736553-48755440:+|nuORF;nc|ENSG00000108846|O15438-2|ABCC3;nc|ENSG00000108846|O15438-4|ABCC3	74.25504064058377	0.37144338840759816	5				NaN	NaN	0	NaN	3412	3323	6730
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6753	22.585	NaN	4226.2	30	0	764.54	0.214	+			44141	TQCGSLIGK	9	59	482.24952060829213	962.4844882833843	2	482.2497863769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_TQC(Carbamidomethyl (C))GSLIGK_	ENSG00000169564|ENST00000303577|PCBP1	74.1650062923329	0.12277912660386392	5				NaN	NaN	0	NaN	3425	3326	6752
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6754	22.589	NaN	6722.2	30	0	2241.6	0.106	+			40932	SVFSDKLHSK	10	46	383.2084375537647	1146.6034832614941	3	383.2083435058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVFSDKLHSK_	ENSG00000187257|ENST00000334955|RSBN1L;nc|ENSG00000187257|Q6PCB5-2|RSBN1L;PTPN12-RSBN1L|1|fusion;PTPN12-RSBN1L|2|fusion;PTPN12-RSBN1L|3|fusion;PTPN12-RSBN1L|4|fusion;PTPN12-RSBN1L|5|fusion;PTPN12-RSBN1L|6|fusion;PTPN12-RSBN1L|7|fusion;PTPN12-RSBN1L|8|fusion	33.03940026070387	0.6100181892187303	5				NaN	NaN	0	NaN	3426	3326	6752
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6755	22.591	NaN	3389.3	30	0	953.28	0.106	+			14121	GSLQPLPWL	9	31	337.5270936601182	1009.5594515805547	3	337.5270690917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GSLQPLPWL_	ENST00000486124.5_1_6:31905151-31913001:+|nuORF	18.324413293986947	0.6112419832031293	5				NaN	NaN	0	NaN	3427	3326	6752
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6756	22.593	NaN	26211	30	0	3447.7	0.106	+			4468	ATIQGAYAR	9	76	475.75622124955936	949.4978895659187	2	475.756103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATIQGAYAR_	ENSG00000109736|ENST00000355443|MFSD10;ENST00000508276.1_1_4:2933242-2933551:-|nuORF;ENST00000514031.5_1_4:2932567-2933551:-|nuORF	129.42129120953632	0.01549634589885217	5				NaN	NaN	0	NaN	3428	3326	6752
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6757	22.595	NaN	2008.7	30	0	608.79	0.106			+	48185	VTAEIHTLGP	10	41	346.5256503657777	1036.5551216975332	3	346.5256042480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTAEIHTLGP_	REV__ENSG00000127481|ENST00000375254|UBR4;REV__nc|ENSG00000127481|Q5T4S7-2|UBR4;REV__nc|ENSG00000127481|Q5T4S7-3|UBR4;REV__nc|ENSG00000127481|Q5T4S7-4|UBR4;REV__UBR4|p.C4515Wfs*2|1|0.06|ENSG00000127481|chr1:19095626-19095626|G/-|frameshift_variant;REV__UBR4|p.L4771Cfs*7|1|0.25|ENSG00000127481|chr1:19088878-19088878|G/-|frameshift_variant;REV__UBR4|p.P4047Ifs*4|1|0.4|ENSG00000127481|chr1:19106932-19106933|GG/-|frameshift_variant	22.579656572578934	0.6954366826851017	5				NaN	NaN	0	NaN	3429	3326	6752
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6758	22.596	NaN	3449.8	30	0	402.99	0.034	+			42108	SYKVSTSGP	9	58	463.23470540931925	924.4548578854385	2	463.2344055175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SYKVSTSGP_	CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000550170.5_1_12:53294858-53298765:-|nuORF;ENST00000562022.1_1_15:43093683-43094592:-|nuORF;KRT8|p.R18Gfs*56|1|0.24|ENSG00000170421|chr12:52904930-52904930|G/-|frameshift_variant;nc|ENSG00000170421|P05787-2|KRT8	106.68306549817024	0.032382560583716295	5				NaN	NaN	0	NaN	3430	3326	6752
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6759	22.597	NaN	4476.6	30	0	1543.9	0.143	+			11530	FPEEDKKTY	9	52	386.18895546075197	1155.545036982456	3	386.1887512207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FPEEDKKTY_	ENSG00000151366|ENST00000281031|NDUFC2;nc|ENSG00000151366|O95298-2|NDUFC2	45.9519527083369	0.35044536499095585	5				NaN	NaN	0	NaN	3431	3326	6752
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6773	22.628	NaN	2578.8	30	0	1613.9	0.214				-1	 	0	31	351.20137692282947	1050.5823013686884	3	351.201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3442	3329	6772
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6774	22.632	NaN	2224.3	30	0	225.34	0.106	+			2911	ASAYSIAQK	9	61	469.7501322921406	937.4857116510813	2	470.24847412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASAYSIAQK_	ENSG00000162813|ENST00000322067|BPNT1;nc|ENSG00000162813|O95861-2|BPNT1;nc|ENSG00000162813|O95861-4|BPNT1	85.16082228582465	0.07850854922700509	5				NaN	NaN	0	NaN	3443	3329	6772
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6775	22.634	NaN	2422	30	0	318.83	0.106	+			9765	ENLREELA	8	57	487.2510134757403	972.4874740182806	2	487.7519836425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ENLREELA_	CON__Q3ZAW8;CON__Q9Z2K1	37.15910966729921	0.6739408393984688	5				NaN	NaN	0	NaN	3444	3329	6772
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6776	22.636	NaN	4222.6	30	0	1725	0.106	+			50549	YASLHGQIY	9	59	526.2639128539568	1050.5132727747134	2	526.7654418945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YASLHGQIY_	ENST00000409195.5_2_2:168108454-168115870:+|nuORF;nc|ENSG00000163092|A4UGR9-4|XIRP2;nc|ENSG00000163092|A4UGR9-5|XIRP2;nc|ENSG00000163092|A4UGR9-6|XIRP2;nc|ENSG00000163092|A4UGR9-7|XIRP2	42.396135135203025	0.392153681582562	5				NaN	NaN	0	NaN	3445	3329	6772
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6777	22.638	NaN	1640.7	30	0	178.2	0.106			+	14262	GSTGAGGLLL	10	51	423.2394104003906	NaN	0	423.2394104003906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GSTGAGGLLL_	REV__ENSG00000261221|ENST00000568956|ZNF865	55.50420428727701	0.270804100254592	5				NaN	NaN	0	NaN	3446	3329	6772
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6778	22.639	NaN	603.15	30	0	44.663	0.037	+			43645	TIRQFPIGSE	10	43	574.3093872070312	NaN	0	574.3093872070312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TIRQFPIGSE_	ENSG00000005108|ENST00000423059|THSD7A;THSD7A|p.C1369Lfs*5|1|0.13|ENSG00000005108|chr7:11406431-11406432|-/A|frameshift_variant;THSD7A|p.N1009Mfs*47|1|0.08|ENSG00000005108|chr7:11446099-11446099|T/-|frameshift_variant;THSD7A|p.R1591Kfs*62|1|0.26|ENSG00000005108|chr7:11379101-11379102|-/C|frameshift_variant;THSD7A|p.S727Kfs*30|1|0.05|ENSG00000005108|chr7:11474407-11474408|-/TTTGTTT|frameshift_variant	30.568863376406313	0.39980281766270914	5				NaN	NaN	0	NaN	3447	3329	6772
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6779	22.64	NaN	1576.6	30	0	229.44	0.14			+	13686	GPKGPPEPPG	10	57	466.7472229003906	NaN	0	466.7472229003906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GPKGPPEPPG_	REV__COL9A2|p.G152E|1|0.23|ENSG00000049089|chr1:40311678-40311678|C/T|missense_variant	51.33545320467046	0.297159550775418	5				NaN	NaN	0	NaN	3448	3329	6772
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6795	22.675	NaN	12452	30	0	3950.7	0.214	+			15416	GTYHGMTLK	9	64	504.2524293088621	1006.4903056845242	2	504.25262451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTYHGMTLK_	ENSG00000134371|ENST00000367435|CDC73	95.81516180277367	0.04847050768394289	5				NaN	NaN	0	NaN	3461	3332	6794
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6796	22.679	NaN	6944	30	0	1081.3	0.106	+			2912	ASAYSIAQK	9	70	469.7501322921406	937.4857116510813	2	469.7505187988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASAYSIAQK_	ENSG00000162813|ENST00000322067|BPNT1;nc|ENSG00000162813|O95861-2|BPNT1;nc|ENSG00000162813|O95861-4|BPNT1	167.22876102047192	0.0032399547248545047	5				NaN	NaN	0	NaN	3462	3332	6794
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6797	22.681	NaN	4303.9	30	0	862.19	0.106	+			34464	RTYVGSMPGR	10	76	562.2868451650357	1122.5591373968714	2	562.2881469726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RTYVGSMPGR_	ENSG00000102910|ENST00000285737|LONP2;LONP2|p.D678Efs*7|1|0.07|ENSG00000102910|chr16:48347601-48347602|-/GT|frameshift_variant;nc|ENSG00000102910|Q86WA8-2|LONP2	89.02883481214508	0.13663399911061233	5				NaN	NaN	0	NaN	3463	3332	6794
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6798	22.683	NaN	6467.9	30	0	2631.7	0.106	+			13944	GRYLQRKLI	9	46	382.90835578448997	1145.70323795367	3	382.90838623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GRYLQRKLI_	NAV3|p.R2193Q|1|0.28|ENSG00000067798|chr12:78199394-78199394|G/A|missense_variant	25.450171626174864	0.5654022654467333	5				NaN	NaN	0	NaN	3464	3332	6794
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6799	22.684	NaN	1214.2	30	0	95.046	0.106	+			46077	VCRRGAPL	8	48	464.7589770879078	NaN	0	464.7588195800781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_VC(Carbamidomethyl (C))RRGAPL_	ENST00000266269.9_2_22:31741767-31741980:-|nuORF	62.97842346883844	1.7418937515398478	5				NaN	NaN	0	NaN	3465	3332	6794
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6800	22.686	NaN	1543.8	30	0	193.01	0.036			+	-1	GQQPTMELM	9	59	533.729256142152	1065.443959351104	2	533.7286376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Oxidation (M)	_GQQPTM(Oxidation (M))ELM(Oxidation (M))_	REV__ENSG00000223865|ENST00000418931|HLA-DPB1;REV__ENST00000470997.1_1_6:33095649-33096858:+|nuORF	49.44154591367651	0.3095138337212152	5				NaN	NaN	0	NaN	3466	3332	6794
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6801	22.687	NaN	1047.5	30	0	45.072	0.14			+	46958	VKGKMPLASK	10	60	529.8228245651426	NaN	0	529.8226318359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VKGKMPLASK_	REV__ENST00000557743.2_1_14:89756667-89757087:-|nuORF	30.317721548370564	0.4006274431774794	5				NaN	NaN	0	NaN	3467	3332	6794
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6814	22.716	NaN	13499	30	0	2123.7	0.214	+			39092	SSSSVLINK	9	59	467.76399495510225	933.5134369770045	2	467.763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSSSVLINK_	ENSG00000120278|ENST00000696526|PLEKHG1	127.46168284122857	0.016682644177004526	5				NaN	NaN	0	NaN	3477	3335	6813
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6815	22.72	NaN	1569.5	30	0	234.59	0.106			+	48816	VVAPLELSR	9	52	492.29751722073013	982.5804815082603	2	492.2982482910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVAPLELSR_	REV__tr|U7T2Z8|U7T2Z8_FUSNUPhosphoenolpyruvate-proteinphosphotransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00339PE=3SV=1	38.80614096846853	0.43426287593479557	5				NaN	NaN	0	NaN	3478	3335	6813
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6816	22.722	NaN	1210.9	30	0	288.1	0.106			+	10167	ESVVLELPDS	10	45	544.2807006835938	NaN	0	544.2807006835938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ESVVLELPDS_	REV__ENSG00000239998|ENST00000391738|LILRA2;REV__nc|ENSG00000239998|Q8N149-3|LILRA2;REV__nc|ENSG00000239998|Q8N149-4|LILRA2	40.05817265558897	0.3684561582319974	5				NaN	NaN	0	NaN	3479	3335	6813
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6817	22.723	NaN	3786.9	30	0	574.85	0.106	+			36155	SEKVDRAVL	9	60	508.7906095954597	1015.5666662577195	2	508.79095458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SEKVDRAVL_	ENSG00000123240|ENST00000378747|OPTN;nc|ENSG00000123240|Q96CV9-2|OPTN;nc|ENSG00000123240|Q96CV9-3|OPTN	66.9202029811203	0.15592758990009112	5				NaN	NaN	0	NaN	3480	3335	6813
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6818	22.725	NaN	1133.5	30	0	97.299	0.106			+	26213	LSSHNLLVF	9	47	515.2890601426873	NaN	0	515.2884521484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSSHNLLVF_	REV__ENSG00000142609|ENST00000682832|CFAP74;REV__ENST00000412120.2_1_1:1853728-1858343:-|nuORF;REV__ENST00000464311.5_1_1:1853728-1858229:-|nuORF;REV__nc|ENSG00000142609|Q9C0B2|CFAP74	42.396135135203025	0.2590952873412954	5				NaN	NaN	0	NaN	3481	3335	6813
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6819	22.727	NaN	2849.7	30	0	895.76	0.035	+			16913	HPLLEGGYF	9	54	516.7595733756106	1031.504593818021	2	516.7610473632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HPLLEGGYF_	nc|ENSG00000010379|Q9NSD5-3|SLC6A13	50.0245360154114	0.3026755932229825	5				NaN	NaN	0	NaN	3482	3335	6813
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6820	22.728	NaN	1632.5	30	0	219.63	0.139	+			63	AAASGGLLK	9	49	394.23732683512844	NaN	0	394.2370910644531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AAASGGLLK_	ENSG00000175073|ENST00000310421|VCPIP1;VCPIP1|p.A460Qfs*2|1|0.36|ENSG00000175073|chr8:66665582-66665582|T/-|frameshift_variant;VCPIP1|p.K1108Nfs*37|1|0.15|ENSG00000175073|chr8:66634846-66634846|T/-|frameshift_variant	58.78195531508484	0.1545138866451181	5				NaN	NaN	0	NaN	3483	3335	6813
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6835	22.761	NaN	6491.1	30	0	846.59	0.214	+			35166	SAIDSVNATSK	11	71	546.7801722029433	1091.5457914726865	2	546.7808227539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAIDSVNATSK_	ENSG00000111641|ENST00000322166|NOP2;ENST00000537708.1_1_12:6669555-6669804:-|nuORF;ENST00000544630.1_1_12:6669555-6669953:-|nuORF;nc|ENSG00000111641|P46087-2|NOP2;nc|ENSG00000111641|P46087-3|NOP2;nc|ENSG00000111641|P46087-4|NOP2	166.86328052991698	3.655267060997126E-05	5				NaN	NaN	0	NaN	3495	3338	6834
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6836	22.764	NaN	6646.3	30	0	957.75	0.106	+			9072	EGGSDQRPGP	10	64	500.2291651056123	998.4437772780246	2	500.7320861816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EGGSDQRPGP_	nc|ENSG00000186891|Q9Y5U5-2|TNFRSF18	26.69291269510374	0.6618461711292317	5				NaN	NaN	0	NaN	3496	3338	6834
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6837	22.766	NaN	3640.9	30	0	1796.5	0.106	+			32614	QYNPHVHQL	9	52	568.2856439145534	1134.5567348959066	2	568.2857666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QYNPHVHQL_	DLG5|p.F1661Ifs*9|1|0.12|ENSG00000151208|chr10:77805849-77805850|-/C|frameshift_variant;ENSG00000151208|ENST00000372391|DLG5;ENST00000459739.5_1_10:79567604-79581271:-|nuORF;ENST00000463362.5_1_10:79552200-79579794:-|nuORF;ENST00000475613.6_1_10:79552200-79579275:-|nuORF;nc|ENSG00000151208|Q8TDM6-2|DLG5;nc|ENSG00000151208|Q8TDM6-4|DLG5;nc|ENSG00000151208|Q8TDM6-5|DLG5	58.22992032128504	0.22837015374068087	5				NaN	NaN	0	NaN	3497	3338	6834
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6838	22.768	NaN	1483.7	30	0	142.53	0.106			+	-1	VVSARVVSC	9	54	488.76587175769214	NaN	0	488.76556396484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_VVSARVVSC(Carbamidomethyl (C))_	REV__ENST00000405805.5_1_13:31191638-31191701:-|nuORF	40.77816245573522	0.2702456086868081	5				NaN	NaN	0	NaN	3498	3338	6834
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6839	22.77	NaN	6713	30	0	880.48	0.106	+			23091	KVVDSLYNK	9	73	533.3005495093089	1064.5865460854177	2	533.3015747070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KVVDSLYNK_	ENSG00000108671|ENST00000261712|PSMD11;ENST00000585265.1_1_17:30807457-30807646:+|nuORF;nc|ENSG00000108671|O00231-2|PSMD11	126.24258497203832	0.01742065577488747	5				NaN	NaN	0	NaN	3499	3338	6834
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6840	22.772	NaN	1489.4	30	0	204.9	0.106	+			17901	IGFPSSAGKG	10	52	460.74645829660017	919.4783636600004	2	460.74676513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IGFPSSAGKG_	ENST00000468313.5_1_17:39657932-39661743:-|nuORF	44.377184641726394	0.5088115166961078	5				NaN	NaN	0	NaN	3500	3338	6834
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6841	22.774	NaN	1082.4	30	0	118.14	0.034	+			16665	HIIATSKSL	9	53	485.2897977283979	NaN	0	485.2900390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HIIATSKSL_	ENSG00000105856|ENST00000222574|HBP1;nc|ENSG00000105856|O60381-2|HBP1;nc|ENSG00000105856|O60381-3|HBP1	71.87747018426188	0.0992163553043454	5				NaN	NaN	0	NaN	3501	3338	6834
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6856	22.805	NaN	5934.8	30	0	723.07	0.214			+	1716	AGVVYKAG	8	53	382.7187052324131	763.4228575316262	2	382.718505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AGVVYKAG_	REV__ENSG00000146039|ENST00000377905|SLC17A4;REV__nc|ENSG00000146039|Q9Y2C5-2|SLC17A4;REV__SLC17A4|p.Y309Ifs*72|1|0.45|ENSG00000146039|chr6:25773607-25773607|T/-|frameshift_variant	77.94384346573518	0.3407065481025094	5				NaN	NaN	0	NaN	3513	3341	6855
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6857	22.809	NaN	6191.9	30	0	2983.7	0.106	+			42598	TATATNHVL	9	55	464.2482826284546	926.4820123237092	2	464.24798583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TATATNHVL_	ENSG00000004700|ENST00000444129|RECQL	90.60085204095205	0.06317133949006545	5				NaN	NaN	0	NaN	3514	3341	6855
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6858	22.811	NaN	2689.1	30	0	286.05	0.106	+			44116	TPYEGQRSY	9	58	550.7537868703417	1099.4930208074834	2	550.754150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TPYEGQRSY_	ENSG00000005007|ENST00000262803|UPF1;nc|ENSG00000005007|Q92900|UPF1	82.7504851949679	0.08565546331141553	5				NaN	NaN	0	NaN	3515	3341	6855
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6859	22.812	NaN	5822	30	0	622.63	0.106	+			29963	PNSKNEKAL	9	66	500.7743941673729	999.5342354015459	2	500.7741394042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PNSKNEKAL_	ENSG00000121858|ENST00000241261|TNFSF10	66.42927471994793	0.16001998865088202	5				NaN	NaN	0	NaN	3516	3341	6855
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6860	22.814	NaN	2664.6	30	0	792.13	0.106			+	17880	IGAQDPRL	8	54	435.24562454275855	868.4766961523171	2	435.2456970214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IGAQDPRL_	REV__CILP2|p.P1036Hfs*17|1|0.12|ENSG00000160161|chr19:19545647-19545647|C/-|frameshift_variant;REV__ENSG00000160161|ENST00000291495|CILP2	47.91560031466742	0.6071945918984287	5				NaN	NaN	0	NaN	3517	3341	6855
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6861	22.816	NaN	1006.3	30	0	206.59	0.033			+	11932	FVGSHFSG	8	33	419.1977792529184	NaN	0	419.1980895996094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FVGSHFSG_	REV__ENST00000336838.10_1_2:55646247-55646439:-|nuORF	35.200714571348534	1.7418937515398478	5				NaN	NaN	0	NaN	3518	3341	6855
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6862	22.817	NaN	1976.2	30	0	585.21	0.14	+			20489	KEYQKAIK	8	57	504.2978538556821	NaN	0	504.297607421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KEYQKAIK_	tr|U7SVZ1|U7SVZ1_FUSNUHTHhxlR-typedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01394PE=4SV=1	49.44154591367651	1.7418937515398478	5				NaN	NaN	0	NaN	3519	3341	6855
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6876	22.848	NaN	20698	30	0	4588.1	0.214	+			4881	ATQCGSLIGK	10	74	517.7682663933846	1033.521979853569	2	517.7686767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_ATQC(Carbamidomethyl (C))GSLIGK_	ENSG00000169564|ENST00000303577|PCBP1	133.9934435666947	0.012355562819581703	5				NaN	NaN	0	NaN	3530	3344	6875
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6877	22.852	NaN	9136.7	30	0	2958.5	0.106	+			45298	TVSADPVVK	9	58	458.26032570536427	914.5060984775286	2	458.2606506347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVSADPVVK_	ENSG00000136051|ENST00000332180|WASHC4	87.69643885390035	0.07135982304947239	5				NaN	NaN	0	NaN	3531	3344	6875
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6878	22.854	NaN	3629	30	0	1617.5	0.106	+			11309	FKTYNYPK	8	60	530.7751672183942	NaN	0	530.7752075195312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FKTYNYPK_	ENSG00000102225|ENST00000357227|CDK16;ENST00000428400.5_1_X:47085983-47086499:+|nuORF;nc|ENSG00000102225|Q00536-2|CDK16;nc|ENSG00000102225|Q00536-3|CDK16	49.44154591367651	1.7418937515398478	5				NaN	NaN	0	NaN	3532	3344	6875
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6879	22.855	NaN	3769.1	30	0	1527.3	0.106			+	45957	VASPSASANRT	11	36	354.185466130371	NaN	0	354.18560791015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VASPSASANRT_	REV__ENSG00000130700|ENST00000252997|GATA5	20.94693142431847	0.456735970842152	5				NaN	NaN	0	NaN	3533	3344	6875
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6880	22.857	NaN	1121.9	30	0	145.8	0.106			+	23753	LCCLLGGAIV	10	49	481.2631421244454	NaN	0	481.2632141113281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LCCLLGGAIV_	REV__ENSG00000118596|ENST00000547379|SLC16A7;REV__ENST00000549928.5_1_12:60154925-60173457:+|nuORF;REV__SLC16A7|p.A263Cfs*11|1|0.13|ENSG00000118596|chr12:59775074-59775075|-/T|frameshift_variant;REV__SLC16A7|p.E215Rfs*2|1|0.08|ENSG00000118596|chr12:59774937-59774938|AG/-|frameshift_variant;REV__SLC16A7|p.F262Lfs*39|1|0.44|ENSG00000118596|chr12:59775075-59775075|T/-|frameshift_variant;REV__SLC16A7|p.F319Lfs*37|1|0.01|ENSG00000118596|chr12:59775249-59775250|-/C|frameshift_variant;REV__SLC16A7|p.L186*|1|0.31|ENSG00000118596|chr12:59774849-59774849|T/-|frameshift_variant;REV__SLC16A7|p.S318Nfs*85|1|0.04|ENSG00000118596|chr12:59775247-59775248|-/ATTCCTTG|frameshift_variant	54.76467175910256	0.2754795324328683	5				NaN	NaN	0	NaN	3534	3344	6875
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6881	22.859	NaN	1769.1	30	0	310.9	0.038			+	21886	KRPQGGPAELL	11	39	389.2275478132399	1164.6608140399196	3	389.22772216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KRPQGGPAELL_	REV__ENSG00000169635|ENST00000407464|HIC2;REV__nc|ENSG00000169635|Q96JB3-2|HIC2	28.5767321226876	0.690044582712672	5				NaN	NaN	0	NaN	3535	3344	6875
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6882	22.86	NaN	2100.3	30	0	239.02	0.14	+			34157	RTAADLPLR	9	56	506.7984042444968	1011.5822555557936	2	506.79840087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RTAADLPLR_	nc|ENSG00000183833|Q7Z4T9-8|CFAP91	54.776311868738084	0.25715957988447635	5				NaN	NaN	0	NaN	3536	3344	6875
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6897	22.893	NaN	25673	30	0	2961.4	0.214	+			50710	YEEVARKL	8	78	504.27953951270854	1006.5445260922171	2	504.27960205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YEEVARKL_	CON__Q3SX28;ENSG00000140416|ENST00000403994|TPM1;ENSG00000143549|ENST00000651641|TPM3;ENSG00000167460|ENST00000643579|TPM4;ENSG00000198467|ENST00000645482|TPM2;ENST00000391998.3_1_19:53982901-53983033:+|nuORF;ENST00000469717.5_1_1:154145382-154155531:-|nuORF;ENST00000471212.5_1_9:35684790-35689844:-|nuORF;ENST00000473036.2_1_1:154145382-154155604:-|nuORF;ENST00000558868.5_1_15:63340774-63353139:+|nuORF;ENST00000560975.5_1_15:63335715-63353895:+|nuORF;ENST00000587201.5_1_19:16187360-16198908:+|nuORF;ENST00000604975.1_1_9:35685264-35689844:-|nuORF;nc|ENSG00000140416|P09493-10|TPM1;nc|ENSG00000140416|P09493-2|TPM1;nc|ENSG00000140416|P09493-3|TPM1;nc|ENSG00000140416|P09493-4|TPM1;nc|ENSG00000140416|P09493-5|TPM1;nc|ENSG00000140416|P09493-6|TPM1;nc|ENSG00000140416|P09493-7|TPM1;nc|ENSG00000140416|P09493-8|TPM1;nc|ENSG00000140416|P09493-9|TPM1;nc|ENSG00000143549|P06753-2|TPM3;nc|ENSG00000143549|P06753-3|TPM3;nc|ENSG00000143549|P06753-4|TPM3;nc|ENSG00000143549|P06753-5|TPM3;nc|ENSG00000143549|P06753-6|TPM3;nc|ENSG00000143549|P06753-7|TPM3;nc|ENSG00000167460|P67936-2|TPM4;nc|ENSG00000198467|P07951-2|TPM2;nc|ENSG00000198467|P07951-3|TPM2;TPM1|p.R160C|1|0.32|ENSG00000140416|chr15:63059666-63059666|C/T|missense_variant	110.11987700582712	0.24509564897437786	5				NaN	NaN	0	NaN	3548	3347	6896
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6898	22.897	NaN	4864.8	30	0	1958.7	0.106	+			4365	ATGSVFTGK	9	52	434.2321370544272	866.4497211756544	2	434.2320251464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATGSVFTGK_	ENSG00000126790|ENST00000247194|L3HYPDH	112.41091882917199	0.026537921851008135	5				NaN	NaN	0	NaN	3549	3347	6896
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6899	22.898	NaN	2472.3	30	0	808.71	0.106	+			13833	GQSDIAITK	9	54	466.75594815602005	931.4973433788401	2	466.75555419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GQSDIAITK_	ENSG00000104738|ENST00000649973|MCM4	45.02220120713402	0.3613509778819777	5				NaN	NaN	0	NaN	3550	3347	6896
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6900	22.9	NaN	3641.1	30	0	2651.1	0.106				-1	 	0	31	323.201526092639	644.3884992520781	2	323.20135498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3551	3347	6896
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6901	22.902	NaN	2161.2	30	0	632.18	0.106	+			4601	ATLISNSK	8	50	417.24008218731876	NaN	0	417.2400207519531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATLISNSK_	ENSG00000116678|ENST00000349533|LEPR	45.97224482568171	1.7418937515398478	5				NaN	NaN	0	NaN	3552	3347	6896
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6902	22.904	NaN	3015.1	30	0	422.37	0.106	+			31698	QNLVLQVL	8	54	463.78720960214054	925.5598662710811	2	463.7864990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QNLVLQVL_	ANLN|p.K85Lfs*45|1|0.05|ENSG00000011426|chr7:36399157-36399158|-/CTTGAGGG|frameshift_variant;ENST00000265748.6_2_7:36438777-36438891:+|nuORF	50.0245360154114	0.5941082100236891	5				NaN	NaN	0	NaN	3553	3347	6896
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6903	22.906	NaN	1370.2	30	0	345.5	0.037	+			11529	FPEEDKKTY	9	48	578.7797335761007	1155.5449142190014	2	578.77978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FPEEDKKTY_	ENSG00000151366|ENST00000281031|NDUFC2;nc|ENSG00000151366|O95298-2|NDUFC2	45.97224482568171	0.3502073465782774	5				NaN	NaN	0	NaN	3554	3347	6896
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6916	22.933	NaN	7755	30	0	2649.4	0.214	+			26694	LVHQVFSEK	9	60	543.800686451838	1085.586819970476	2	543.8010864257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LVHQVFSEK_	ENSG00000170324|ENST00000374201|FRMPD2;FRMPD2|p.K602Sfs*61|1|0.27|ENSG00000170324|chr10:48201377-48201377|T/-|frameshift_variant;FRMPD2|p.N579Tfs*84|1|0.32|ENSG00000170324|chr10:48206809-48206809|T/-|frameshift_variant;nc|ENSG00000170324|Q68DX3-2|FRMPD2	74.25504064058377	0.12238981753128622	5				NaN	NaN	0	NaN	3564	3350	6915
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6917	22.936	NaN	31316	30	0	12300	0.106	+			39479	STFDTQITKK	10	63	390.2118137637632	1167.6136118914897	3	390.211669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STFDTQITKK_	ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC;PRKDC|p.D2437Wfs*3|1|0.11|ENSG00000253729|chr8:47840161-47840162|-/CA|frameshift_variant;PRKDC|p.K3681Nfs*6|1|0.32|ENSG00000253729|chr8:47785174-47785177|TTCT/-|frameshift_variant;PRKDC|p.M3670*|1|0.5|ENSG00000253729|chr8:47785212-47785212|T/-|frameshift_variant;PRKDC|p.M3846Cfs*12|1|0.13|ENSG00000253729|chr8:47779047-47779047|T/-|frameshift_variant;PRKDC|p.M4020Cfs*2|1|0.31|ENSG00000253729|chr8:47776968-47776968|T/-|frameshift_variant;PRKDC|p.N3605Kfs*3|1|0.22|ENSG00000253729|chr8:47788993-47788994|-/T|frameshift_variant;PRKDC|p.N4037Ifs*15|1|0.17|ENSG00000253729|chr8:47776916-47776916|T/-|frameshift_variant;PRKDC|p.R2704Gfs*13|2|0.34|ENSG00000253729|chr8:47834238-47834238|T/-|frameshift_variant;PRKDC|p.S3402Ifs*16|1|0.04|ENSG00000253729|chr8:47799302-47799303|-/AAACCGTGAGTTAGAGGAGGTAA|frameshift_variant;PRKDC|p.S4099Qfs*6|1|0.25|ENSG00000253729|chr8:47774265-47774265|A/-|frameshift_variant;PRKDC|p.T3268Pfs*7|1|0.5|ENSG00000253729|chr8:47803426-47803426|T/-|frameshift_variant;PRKDC|p.W3401Cfs*4|1|0.01|ENSG00000253729|chr8:47799304-47799305|-/AATGAATA|frameshift_variant	81.52500206392136	0.18316182710238588	5				NaN	NaN	0	NaN	3565	3350	6915
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6918	22.938	NaN	9396.1	30	0	1405	0.106			+	46789	VHISKFDLQ	9	73	362.8695431946872	1085.5868001842616	3	362.8695373535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VHISKFDLQ_	REV__ENSG00000138688|ENST00000679879|BLTP1;REV__nc|ENSG00000138688|Q2LD37-4|BLTP1;REV__nc|ENSG00000138688|Q2LD37|BLTP1	64.20726635412375	0.17854274437659667	5				NaN	NaN	0	NaN	3566	3350	6915
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6919	22.94	NaN	4667.1	30	0	774.67	0.106	+			46649	VGDPGQRTL	9	63	471.75358007131354	941.4926072094271	2	471.75341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VGDPGQRTL_	ARID1A|p.F2141Sfs*59|5|0.26|ENSG00000117713|chr1:26780313-26780313|C/-|frameshift_variant;ARID1A|p.P2114Rfs*21|1|0.46|ENSG00000117713|chr1:26780236-26780236|C/-|frameshift_variant;ARID1A|p.V2244Gfs*34|1|0.31|ENSG00000117713|chr1:26780626-26780627|-/G|frameshift_variant;ENSG00000117713|ENST00000324856|ARID1A;nc|ENSG00000117713|O14497-2|ARID1A;nc|ENSG00000117713|O14497-3|ARID1A	66.96192283764107	0.15557981141143568	5				NaN	NaN	0	NaN	3567	3350	6915
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6920	22.942	NaN	3723.7	30	0	425.02	0.106	+			17781	IESVNGKTV	9	61	473.76366416884343	NaN	0	473.76373291015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IESVNGKTV_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	70.8162118820467	0.10318768208603292	5				NaN	NaN	0	NaN	3568	3350	6915
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6921	22.944	NaN	4121.7	30	0	1338.8	0.034	+			14241	GSSSSTFIK	9	52	457.23467775720655	NaN	0	457.23468017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GSSSSTFIK_	ENSG00000134853|ENST00000257290|PDGFRA	60.11826168202944	0.14881452885248947	5				NaN	NaN	0	NaN	3569	3350	6915
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6922	22.944	NaN	4915.4	30	0	2759.1	0.138	+			29743	PHQASPTL	8	42	425.7244244634724	849.4342959937449	2	425.7242736816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PHQASPTL_	ENST00000532354.1_1_11:6340395-6341123:-|nuORF	40.5726180659479	0.6527593143185008	5				NaN	NaN	0	NaN	3570	3350	6915
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6935	22.973	NaN	12221	30	0	1302.3	0.214	+			36308	SESAQSKML	9	68	490.7391340570789	979.4637151809578	2	490.73919677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SESAQSKML_	ENSG00000179344|ENST00000434651|HLA-DQB1;ENSG00000196126|ENST00000360004|HLA-DRB1;ENSG00000198502|ENST00000374975|HLA-DRB5;ENSG00000232629|ENST00000437316|HLA-DQB2;ENST00000487676.1_1_6:32628015-32629319:-|nuORF;nc|ENSG00000179344|P01920|HLA-DQB1;nc|ENSG00000232629|P05538|HLA-DQB2	134.7655990226056	0.012935733000282069	5				NaN	NaN	0	NaN	3580	3353	6934
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6936	22.977	NaN	4719	30	0	999.69	0.106	+			3314	ASLTDTVNK	9	65	474.7534174619474	947.4922819906948	2	474.7532043457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASLTDTVNK_	ENSG00000163946|ENST00000683822|TASOR;nc|ENSG00000163946|Q9UK61-2|TASOR;nc|ENSG00000163946|Q9UK61-3|TASOR;nc|ENSG00000163946|Q9UK61-4|TASOR	104.0567914643314	0.03506238181059741	5				NaN	NaN	0	NaN	3581	3353	6934
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6937	22.979	NaN	3283.1	30	0	645.81	0.106	+			5677	AVDTAYVAK	9	54	469.25301825856826	936.4914835839365	2	469.2527160644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVDTAYVAK_	ENSG00000174851|ENST00000376901|YIF1A;ENST00000376899.8_1_11:66054976-66056456:-|nuORF;YIF1A|p.R131Gfs*50|3|0.43|ENSG00000174851|chr11:66287634-66287634|G/-|frameshift_variant	87.69643885390035	0.07135982304947239	5				NaN	NaN	0	NaN	3582	3353	6934
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6938	22.981	NaN	6101.6	30	0	986.78	0.106	+			3589	ASVGYAVTK	9	59	448.24767040132235	894.4807878694447	2	448.2474060058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASVGYAVTK_	ENSG00000180198|ENST00000683442|RCC1;nc|ENSG00000180198|P18754-2|RCC1	155.5846463517096	0.005567437401040498	5				NaN	NaN	0	NaN	3583	3353	6934
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6939	22.983	NaN	5273.8	30	0	652.77	0.106	+			13002	GEVDTSLVLS	10	63	510.2670868861113	1018.5196208390227	2	510.2674865722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GEVDTSLVLS_	ENSG00000005381|ENST00000225275|MPO;ENST00000580005.1_1_17:56357276-56358041:-|nuORF;MPO|p.R302Afs*132|1|0.16|ENSG00000005381|chr17:58278127-58278127|G/-|frameshift_variant;nc|ENSG00000005381|P05164-3|MPO	45.97224482568171	0.49411383603842696	5				NaN	NaN	0	NaN	3584	3353	6934
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6940	22.984	NaN	3228.8	30	0	330.25	0.035	+			46102	VDDLLLRR	8	61	500.30045444727637	998.5863559613528	2	500.30059814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VDDLLLRR_	ENSG00000115211|ENST00000347454|EIF2B4;ENST00000475582.5_1_2:27591484-27592470:-|nuORF;nc|ENSG00000115211|Q9UI10-2|EIF2B4;nc|ENSG00000115211|Q9UI10-3|EIF2B4	26.79610172149135	0.7524337208463756	5				NaN	NaN	0	NaN	3585	3353	6934
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6941	22.985	NaN	9198.8	30	0	1314.7	0.139	+			28772	NPEHASVAM	9	68	478.2183686597414	954.4221843862828	2	478.7196044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NPEHASVAM_	ENSG00000102317|ENST00000376759|RBM3;ENST00000466764.5_1_X:48433568-48434262:+|nuORF;ENST00000488216.5_1_X:48433568-48434199:+|nuORF;ENST00000491240.5_1_X:48433911-48434199:+|nuORF	71.29570347882199	0.13518600952103718	5				NaN	NaN	0	NaN	3586	3353	6934
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6953	23.012	NaN	3943.6	30	0	978.29	0.214	+			36015	SEIERQAQV	9	60	530.2744363069729	1058.5343196807457	2	530.2750244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEIERQAQV_	ENSG00000149182|ENST00000524782|ARFGAP2;ENST00000395449.7_1_11:47187835-47198404:-|nuORF;nc|ENSG00000149182|Q8N6H7-2|ARFGAP2	54.722347961057174	0.257609425301511	5				NaN	NaN	0	NaN	3595	3356	6952
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6954	23.016	NaN	2334.7	30	0	426.22	0.106	+			8148	EAAGEVRAM	9	59	467.2264128626848	932.4382727921696	2	467.2261047363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EAAGEVRAM_	ENST00000256015.4_1_12:92539535-92539610:-|nuORF	90.36981228632155	0.0638227155548745	5				NaN	NaN	0	NaN	3596	3356	6952
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6955	23.018	NaN	4104	30	0	403.63	0.106	+			49732	VYNNNSSRF	9	65	550.7602572136749	NaN	0	550.7607421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYNNNSSRF_	ENSG00000145555|ENST00000513610|MYO10;MYO10|p.G1223Rfs*28|1|0.25|ENSG00000145555|chr5:16694504-16694505|-/T|frameshift_variant;MYO10|p.I417Tfs*39|1|0.05|ENSG00000145555|chr5:16764326-16764327|-/ACAAATCTCTG|frameshift_variant;MYO10|p.N507Qfs*30|1|0.11|ENSG00000145555|chr5:16762613-16762614|-/TG|frameshift_variant;MYO10|p.S468Ffs*8|1|0.05|ENSG00000145555|chr5:16763679-16763680|-/A|frameshift_variant	90.60085204095205	0.040385177724871185	5				NaN	NaN	0	NaN	3597	3356	6952
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6956	23.02	NaN	1538.8	30	0	667.82	0.106			+	31915	QQLIGNILVQ	10	50	563.3348388671875	NaN	0	563.3348388671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QQLIGNILVQ_	REV__ATP8B2|p.K587Efs*10|1|0.31|ENSG00000143515|chr1:154343465-154343466|-/G|frameshift_variant;REV__ENSG00000143515|ENST00000368489|ATP8B2;REV__ENST00000426445.1_1_1:154301436-154313374:+|nuORF;REV__nc|ENSG00000143515|P98198-2|ATP8B2;REV__nc|ENSG00000143515|P98198-3|ATP8B2;REV__nc|ENSG00000143515|P98198-4|ATP8B2;REV__nc|ENSG00000143515|P98198|ATP8B2	41.42661286455405	0.3598046802465243	5				NaN	NaN	0	NaN	3598	3356	6952
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6957	23.021	NaN	3329	30	0	629.86	0.106	+			348	AAQDSTDLVAK	11	68	559.787794620245	1117.56103630729	2	559.7890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AAQDSTDLVAK_	ENSG00000120438|ENST00000321394|TCP1;ENST00000546204.1_1_6:160200657-160201127:-|nuORF	91.46909648831856	0.0927605832428752	5				NaN	NaN	0	NaN	3599	3356	6952
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6958	23.023	NaN	1495.9	30	0	278.58	0.032			+	-1	GALCLGEV	8	40	409.7073959339613	NaN	0	409.70794677734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_GALC(Carbamidomethyl (C))LGEV_	REV__CON__ENSEMBL:ENSBTAP00000007350;REV__CON__P01030;REV__ENSG00000224389|ENST00000435363|C4B;REV__ENSG00000244731|ENST00000428956|C4A;REV__nc|ENSG00000244731|P0C0L4-2|C4A	35.200714571348534	1.7418937515398478	5				NaN	NaN	0	NaN	3600	3356	6952
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6959	23.024	NaN	1416.9	30	0	198.25	0.14				-1	LMPMKVKQ	8	57	495.77621515863484	NaN	0	495.77679443359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_LMPM(Oxidation (M))KVKQ_	ENSG00000155561|ENST00000285968|NUP205;NUP205|p.F1204Lfs*34|1|0.12|ENSG00000155561|chr7:135617163-135617163|T/-|frameshift_variant;NUP205|p.L400H|1|0.22|ENSG00000155561|chr7:135584988-135584988|T/A|missense_variant;NUP205|p.Q1211Kfs*27|1|0.25|ENSG00000155561|chr7:135617188-135617188|C/-|frameshift_variant	28.2542754592877	1.7418937515398478	5				NaN	NaN	0	NaN	3601	3356	6952
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6974	23.057	NaN	1432.8	30	0	132.07	0.214	+			24944	LKYSFHDVK	9	63	568.806458455847	NaN	0	568.8062744140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LKYSFHDVK_	ENSG00000173821|ENST00000582970|RNF213;nc|ENSG00000173821|Q63HN8-4|RNF213;nc|ENSG00000173821|Q63HN8|RNF213;RNF213|p.C5022Lfs*7|1|0.3|ENSG00000173821|chr17:80389237-80389237|G/-|frameshift_variant	47.657333605630114	0.2228375344433429	5				NaN	NaN	0	NaN	3613	3359	6973
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6975	23.061	NaN	1478.8	30	0	463.8	0.106			+	5190	ATTLLSKG	8	44	395.73747522527384	789.4603975173477	2	395.7369384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATTLLSKG_	REV__TRIM33|p.Q382Tfs*20|1|0.12|ENSG00000197323|chr1:114430809-114430810|-/T|frameshift_variant	37.15910966729921	0.6739408393984688	5				NaN	NaN	0	NaN	3614	3359	6973
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6976	23.063	NaN	4431.5	30	0	431.59	0.106	+			12523	GEFEKKYVA	9	64	535.7793809049024	1069.5442088766047	2	535.7797241210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEFEKKYVA_	ENSG00000132341|ENST00000543796|RAN	79.71258880314673	0.09879134589249085	5				NaN	NaN	0	NaN	3615	3359	6973
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6977	23.064	NaN	1091.1	30	0	93.589	0.106	+			19472	KASSEMALYQK	11	56	628.3207985992603	1254.6270442653206	2	628.822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KASSEMALYQK_	ENSG00000155463|ENST00000612549|OXA1L;ENST00000473744.5_1_14:23235910-23239613:+|nuORF;ENST00000481218.1_1_14:23236498-23239613:+|nuORF;ENST00000495424.5_1_14:23235916-23239613:+|nuORF;nc|ENSG00000155463|Q15070-2|OXA1L;nc|ENSG00000155463|Q15070-3|OXA1L;OXA1L|p.N431Mfs*4|1|0.29|ENSG00000155463|chr14:22771273-22771273|A/-|frameshift_variant	77.53327743719008	0.17293716712445248	5				NaN	NaN	0	NaN	3616	3359	6973
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6978	23.066	NaN	3058.8	30	0	788.54	0.106	+			22431	KTLDAEVVEK	10	66	566.3162322020958	1130.6179114709914	2	566.3167724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KTLDAEVVEK_	ENSG00000185049|ENST00000382882|NELFA;ENST00000463820.5_1_4:1985048-1993691:-|nuORF;ENST00000467661.5_1_4:1985048-1988196:-|nuORF;nc|ENSG00000185049|Q9H3P2-7|NELFA;NELFA|p.P411Rfs*67|1|0.23|ENSG00000185049|chr4:1983918-1983918|G/-|frameshift_variant	68.78561909154949	0.2872414881718259	5				NaN	NaN	0	NaN	3617	3359	6973
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6979	23.068	NaN	1430	30	0	276.15	0.038			+	1152	AEMVSLIKSNL	11	33	402.2267150878906	NaN	0	402.2267150878906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEMVSLIKSNL_	REV__ENSG00000105186|ENST00000306065|ANKRD27	22.561587123415745	0.456735970842152	5				NaN	NaN	0	NaN	3618	3359	6973
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6980	23.069	NaN	4124.7	30	0	948.08	0.143			+	-1	PCHTWKCLL	9	52	386.52360391901084	NaN	0	386.1891784667969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_PCHTWKC(Carbamidomethyl (C))LL_	REV__nc|ENSG00000078319|A4D2B8-2|PMS2P1	37.15910966729921	0.2899585034171616	5				NaN	NaN	0	NaN	3619	3359	6973
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6996	23.104	NaN	9235.4	30	0	1668.8	0.214	+			17653	IEKFDKSKL	9	71	554.3237399187014	1106.6329269042028	2	554.3242797851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IEKFDKSKL_	ENSG00000154620|ENST00000284856|TMSB4Y;ENSG00000205542|ENST00000451311|TMSB4X;ENST00000323496.5_1_9:131104444-131104642:+|nuORF;TMSB4X|p.A8V|1|0.09|ENSG00000205542|chrX:12976284-12976284|C/T|missense_variant	110.54063921016906	0.028446334666513563	5				NaN	NaN	0	NaN	3632	3362	6995
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6997	23.107	NaN	33703	30	0	6874.8	0.106	+			43214	TEVKKIYKL	9	96	374.5691184886482	1120.6855260661446	3	374.5690002441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEVKKIYKL_	ENSG00000144034|ENST00000272424|TPRKB;nc|ENSG00000144034|Q9Y3C4-2|TPRKB;nc|ENSG00000144034|Q9Y3C4-3|TPRKB	112.41091882917199	0.026537921851008135	5				NaN	NaN	0	NaN	3633	3362	6995
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6998	23.109	NaN	3774.6	30	0	427.79	0.106	+			35032	SADDRCKVL	9	63	503.7526330120214	1005.4907130908429	2	503.7525329589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SADDRCKVL_	ENSG00000111605|ENST00000435070|CPSF6;nc|ENSG00000111605|Q16630-2|CPSF6;nc|ENSG00000111605|Q16630-3|CPSF6	39.252832667884924	0.4290233611298554	5				NaN	NaN	0	NaN	3634	3362	6995
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6999	23.111	NaN	2737.4	30	0	315.59	0.106	+			12562	GEGKPTPAL	9	51	435.23961758246526	868.4646822317305	2	435.2393798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEGKPTPAL_	ENSG00000132305|ENST00000410111|IMMT;ENST00000409258.2_1_2:86386442-86398424:-|nuORF;ENST00000474969.5_1_2:86385703-86422514:-|nuORF;nc|ENSG00000132305|Q16891-2|IMMT;nc|ENSG00000132305|Q16891-3|IMMT;nc|ENSG00000132305|Q16891-4|IMMT	71.87747018426188	0.13267044672804276	5				NaN	NaN	0	NaN	3635	3362	6995
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7000	23.113	NaN	1182.5	30	0	61.093	0.106	+			25553	LPVTATEASVP	11	44	542.7978515625	NaN	0	542.7978515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LPVTATEASVP_	ENSG00000170234|ENST00000307063|PWWP2A;nc|ENSG00000170234|Q96N64-2|PWWP2A;nc|ENSG00000170234|Q96N64-3|PWWP2A;PWWP2A|p.A270Efs*45|1|0.04|ENSG00000170234|chr5:160093841-160093842|-/TAGTGCAACTGACT|frameshift_variant;PWWP2A|p.E335Gfs*3|1|0.22|ENSG00000170234|chr5:160093648-160093649|-/T|frameshift_variant;PWWP2A|p.K334Rfs*25|2|0.23|ENSG00000170234|chr5:160093649-160093649|T/-|frameshift_variant;PWWP2A|p.P271Tfs*13|1|0.04|ENSG00000170234|chr5:160093840-160093841|-/A|frameshift_variant	42.33807565288922	0.3703495330385095	5				NaN	NaN	0	NaN	3636	3362	6995
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7001	23.115	NaN	873.64	30	0	81.558	0.106	+			24646	LGTGLRAGV	9	39	422.2556237024096	NaN	0	422.2554626464844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LGTGLRAGV_	ENSG00000131730|ENST00000254035|CKMT2;ENSG00000166165|ENST00000348956|CKB;ENSG00000223572|ENST00000413453|CKMT1A;ENSG00000237289|ENST00000441322|CKMT1B;ENST00000437534.3_1_15:43890378-43891468:+|nuORF;nc|ENSG00000237289|P12532-2|CKMT1A	34.172542307311794	0.30503706118289736	5				NaN	NaN	0	NaN	3637	3362	6995
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7002	23.117	NaN	1483.6	30	0	127.23	0.035			+	42910	TEIDEPLSL	9	59	508.7614436864946	1015.5083344397892	2	508.76141357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TEIDEPLSL_	REV__ENSG00000142798|ENST00000374695|HSPG2;REV__HSPG2|p.C2696Sfs*49|1|0.18|ENSG00000142798|chr1:21847425-21847431|GCCCGGC/-|frameshift_variant;REV__HSPG2|p.G2190Afs*19|1|0.38|ENSG00000142798|chr1:21852941-21852941|C/-|frameshift_variant;REV__HSPG2|p.P3071Hfs*100|1|0.06|ENSG00000142798|chr1:21841639-21841655|GATGATGGAGCCATTGG/-|frameshift_variant;REV__HSPG2|p.P3112Lfs*13|1|0.47|ENSG00000142798|chr1:21841279-21841279|G/-|frameshift_variant;REV__HSPG2|p.Q407Pfs*62|1|0.23|ENSG00000142798|chr1:21885148-21885149|-/G|frameshift_variant	30.503639358989545	0.5181749237905803	5				NaN	NaN	0	NaN	3638	3362	6995
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7016	23.146	NaN	23272	30	0	8005.1	0.214	+			18843	IVAGTLTNK	9	61	458.77651025532884	915.5384675774577	2	458.77642822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IVAGTLTNK_	DAZAP1-NDUFS7|1|fusion;ENSG00000115286|ENST00000233627|NDUFS7;ENST00000436115.6_1_19:1390815-1393403:+|nuORF;ENST00000538523.5_1_19:1387763-1393403:+|nuORF;ENST00000538662.5_1_19:1383907-1391085:+|nuORF;ENST00000543289.5_1_19:1388688-1391085:+|nuORF;ENST00000545446.5_1_19:1388688-1393403:+|nuORF;nc|ENSG00000115286|O75251-2|NDUFS7	190.51785368661015	0.00024017880420896124	5				NaN	NaN	0	NaN	3649	3365	7015
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7017	23.15	NaN	1378.6	30	0	136.88	0.106			+	50081	WGELNKQI	8	56	494.26463977259056	986.5147266119811	2	494.2647705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WGELNKQI_	REV__ENSG00000174705|ENST00000311601|SH3PXD2B;REV__SH3PXD2B|p.G814Afs*37|1|0.38|ENSG00000174705|chr5:172338664-172338664|C/-|frameshift_variant	50.0245360154114	0.5941082100236891	5				NaN	NaN	0	NaN	3650	3365	7015
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7018	23.152	NaN	1702.7	30	0	178.59	0.106			+	629	ADVLREFAQ	9	62	524.7753814205784	1047.5362099079566	2	524.775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ADVLREFAQ_	REV__ENSG00000169213|ENST00000371655|RAB3B	63.53385203322761	0.18415635464017938	5				NaN	NaN	0	NaN	3651	3365	7015
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7019	23.153	NaN	2982.1	30	0	536.5	0.106			+	25657	LRAEGSPLQ	9	53	485.7693929959877	969.5242330587754	2	485.7683410644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LRAEGSPLQ_	REV__ENSG00000279270|ENST00000624978|OR52R1	31.529811441608018	0.5085848003137583	5				NaN	NaN	0	NaN	3652	3365	7015
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7020	23.155	NaN	582.19	30	0	332.39	0.106				-1	LACHPPLSP	9	10	331.1721496582031	NaN	0	331.1721496582031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_LAC(Carbamidomethyl (C))HPPLSP_	ENSG00000145911|ENST00000274605|N4BP3;N4BP3|p.Y248Tfs*50|2|0.19|ENSG00000145911|chr5:178120583-178120583|C/-|frameshift_variant	15.641811463095205	0.38404136392510424	5				NaN	NaN	0	NaN	3653	3365	7015
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7021	23.157	NaN	1831.8	30	0	293.4	0.033	+			13419	GLGKTTLAH	9	54	449.2612063495103	896.5078597658206	2	449.2606201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GLGKTTLAH_	CHTF18|p.V386M|1|0.46|ENSG00000127586|chr16:791902-791902|G/A|missense_variant;ENSG00000127586|ENST00000262315|CHTF18;ENST00000464728.5_1_16:841811-841949:+|nuORF;nc|ENSG00000127586|Q8WVB6-2|CHTF18	32.81241826257853	0.4965981579233955	5				NaN	NaN	0	NaN	3654	3365	7015
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7033	23.183	NaN	3932.5	30	0	564.21	0.214	+			40804	SVDVHQVYK	9	67	537.7826201635015	1073.550687393803	2	537.7833862304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVDVHQVYK_	ENSG00000186314|ENST00000683046|PRELID2;ENST00000394450.6_1_5:145205751-145214847:-|nuORF;ENST00000515475.1_1_5:145199495-145214847:-|nuORF;nc|ENSG00000186314|Q8N945|PRELID2;PRELID2|p.N28Tfs*10|1|0.28|ENSG00000186314|chr5:145823129-145823129|G/-|frameshift_variant	87.69643885390035	0.07135982304947239	5				NaN	NaN	0	NaN	3663	3368	7032
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7034	23.186	NaN	5570.7	30	0	1045.4	0.106	+			16157	HEAERNIAL	9	69	526.777442187462	1051.540331441724	2	526.7776489257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HEAERNIAL_	ENSG00000015568|ENST00000016946|RGPD5;ENSG00000153165|ENST00000409886|RGPD3;ENSG00000153201|ENST00000283195|RANBP2;ENSG00000169629|ENST00000302558|RGPD8;ENSG00000183054|ENST00000329516|RGPD6;ENSG00000185304|ENST00000398146|RGPD2;ENSG00000187627|ENST00000641458|RGPD1;ENSG00000196862|ENST00000408999|RGPD4;nc|ENSG00000183054|Q99666-2|RGPD5;nc|ENSG00000187627|P0DJD0|RGPD1;nc|ENSG00000196862|Q7Z3J3-2|RGPD4;RANBP2|p.A864Lfs*3|1|0.3|ENSG00000153201|chr2:108758533-108758533|G/-|frameshift_variant;RANBP2|p.C2737Vfs*35|1|0.18|ENSG00000153201|chr2:108772957-108772957|T/-|frameshift_variant;RANBP2|p.F3068Lfs*10|1|0.06|ENSG00000153201|chr2:108782692-108782692|T/-|frameshift_variant;RANBP2|p.H3114Sfs*18|1|0.33|ENSG00000153201|chr2:108782827-108782828|-/T|frameshift_variant;RANBP2|p.K1989Nfs*9|1|0.05|ENSG00000153201|chr2:108766505-108766506|-/TATCCTG|frameshift_variant;RANBP2|p.K2576Nfs*63|2|0.22|ENSG00000153201|chr2:108768262-108768262|A/-|frameshift_variant;RANBP2|p.S1486Rfs*51|1|0.05|ENSG00000153201|chr2:108764996-108764997|-/ATTTTGTATTC|frameshift_variant;RGPD2|p.F1350Lfs*25|1|0.25|ENSG00000185304|chr2:87782974-87782974|A/-|frameshift_variant;RGPD3|p.V1441*|1|0.45|ENSG00000153165|chr2:106423647-106423647|T/-|frameshift_variant;RGPD4|p.K568Nfs*33|1|0.14|ENSG00000196862|chr2:107859787-107859787|A/-|frameshift_variant	53.08895987439943	0.27122541748218487	5				NaN	NaN	0	NaN	3664	3368	7032
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7035	23.188	NaN	1685.2	30	0	84.8	0.106	+			50675	YEEEVKKTL	9	61	569.8035278320312	NaN	0	569.8035278320312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YEEEVKKTL_	ECHDC1|p.N109Ifs*9|1|0.19|ENSG00000093144|chr6:127327057-127327057|T/-|frameshift_variant;ECHDC1|p.N222Mfs*3|1|0.46|ENSG00000093144|chr6:127290128-127290128|T/-|frameshift_variant;ENSG00000093144|ENST00000454859|ECHDC1;ENST00000368287.1_1_6:127648134-127664493:-|nuORF;nc|ENSG00000093144|Q9NTX5-5|ECHDC1;nc|ENSG00000093144|Q9NTX5-6|ECHDC1;nc|ENSG00000093144|Q9NTX5|ECHDC1	85.86182877749512	0.05129763505578642	5				NaN	NaN	0	NaN	3665	3368	7032
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7036	23.19	NaN	2335.7	30	0	427.81	0.106			+	22609	KTTKQAAFL	9	61	504.2981804166085	1006.581807900017	2	504.2979431152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTTKQAAFL_	REV__tr|U7SWV5|U7SWV5_FUSNUBD-FAE-likedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01186PE=4SV=1	35.61828744233558	0.47037581924408073	5				NaN	NaN	0	NaN	3666	3368	7032
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7037	23.192	NaN	1502.4	30	0	158.68	0.106	+			40592	SVAGLSAER	9	46	445.24053955078125	NaN	0	445.24053955078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVAGLSAER_	ENSG00000169006|ENST00000306928|NTSR2	42.86426827375447	0.2558691296974908	5				NaN	NaN	0	NaN	3667	3368	7032
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7038	23.194	NaN	640.13	30	0	112.68	0.037	+			38364	SRRGVSETAPA	11	47	565.800537109375	NaN	0	565.800537109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SRRGVSETAPA_	ENSG00000225950|ENST00000593537|NTF4	35.15202426646627	0.40875833226131825	5				NaN	NaN	0	NaN	3668	3368	7032
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7055	23.229	NaN	20332	30	0	3493.2	0.214	+			16158	HEAERNIAL	9	83	526.777442187462	1051.540331441724	2	526.778076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HEAERNIAL_	ENSG00000015568|ENST00000016946|RGPD5;ENSG00000153165|ENST00000409886|RGPD3;ENSG00000153201|ENST00000283195|RANBP2;ENSG00000169629|ENST00000302558|RGPD8;ENSG00000183054|ENST00000329516|RGPD6;ENSG00000185304|ENST00000398146|RGPD2;ENSG00000187627|ENST00000641458|RGPD1;ENSG00000196862|ENST00000408999|RGPD4;nc|ENSG00000183054|Q99666-2|RGPD5;nc|ENSG00000187627|P0DJD0|RGPD1;nc|ENSG00000196862|Q7Z3J3-2|RGPD4;RANBP2|p.A864Lfs*3|1|0.3|ENSG00000153201|chr2:108758533-108758533|G/-|frameshift_variant;RANBP2|p.C2737Vfs*35|1|0.18|ENSG00000153201|chr2:108772957-108772957|T/-|frameshift_variant;RANBP2|p.F3068Lfs*10|1|0.06|ENSG00000153201|chr2:108782692-108782692|T/-|frameshift_variant;RANBP2|p.H3114Sfs*18|1|0.33|ENSG00000153201|chr2:108782827-108782828|-/T|frameshift_variant;RANBP2|p.K1989Nfs*9|1|0.05|ENSG00000153201|chr2:108766505-108766506|-/TATCCTG|frameshift_variant;RANBP2|p.K2576Nfs*63|2|0.22|ENSG00000153201|chr2:108768262-108768262|A/-|frameshift_variant;RANBP2|p.S1486Rfs*51|1|0.05|ENSG00000153201|chr2:108764996-108764997|-/ATTTTGTATTC|frameshift_variant;RGPD2|p.F1350Lfs*25|1|0.25|ENSG00000185304|chr2:87782974-87782974|A/-|frameshift_variant;RGPD3|p.V1441*|1|0.45|ENSG00000153165|chr2:106423647-106423647|T/-|frameshift_variant;RGPD4|p.K568Nfs*33|1|0.14|ENSG00000196862|chr2:107859787-107859787|A/-|frameshift_variant	65.46538089061403	0.16805504838372562	5				NaN	NaN	0	NaN	3682	3371	7054
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7056	23.232	NaN	46521	30	0	22243	0.106	+			5693	AVETMPRLSP	10	62	367.5303830334353	1099.569319700506	3	367.53045654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVETMPRLSP_	ENST00000373039.4_1_20:42233685-42242527:+|nuORF	51.33545320467046	0.4446945571623749	5				NaN	NaN	0	NaN	3683	3371	7054
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7057	23.234	NaN	5119.9	30	0	1685.4	0.106	+			44553	TTANTSRPLK	10	44	363.5414345690973	1087.602474307492	3	363.5413818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TTANTSRPLK_	ENST00000474031.5_1_17:39671722-39674667:-|nuORF;nc|ENSG00000171346|P19012-2|KRT15	41.42661286455405	0.5359995577334734	5				NaN	NaN	0	NaN	3684	3371	7054
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7058	23.236	NaN	5385.3	30	0	2778.4	0.106	+			333	AAPTPGRAL	9	47	427.24798016476353	852.4814073963271	2	427.248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AAPTPGRAL_	ENSG00000174705|ENST00000311601|SH3PXD2B;SH3PXD2B|p.G814Afs*37|1|0.38|ENSG00000174705|chr5:172338664-172338664|C/-|frameshift_variant	24.519189625965996	0.574102787014149	5				NaN	NaN	0	NaN	3685	3371	7054
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7059	23.238	NaN	12733	30	0	2259.5	0.106	+			4627	ATLNVSTTR	9	70	481.7667415881093	961.5189302430186	2	481.7666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATLNVSTTR_	ENSG00000088448|ENST00000267339|ANKRD10;ENST00000460846.1_1_13:111557570-111567134:-|nuORF;nc|ENSG00000088448|Q9NXR5-2|ANKRD10	128.3478880297481	0.016146157547210084	5				NaN	NaN	0	NaN	3686	3371	7054
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7060	23.24	NaN	3617.3	30	0	1067.5	0.034	+			30344	PTVGRGPHL	9	52	467.2661727153909	932.5177924975818	2	467.2654724121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PTVGRGPHL_	TNS2|p.G574R|1|0.34|ENSG00000111077|chr12:53059361-53059361|G/A|missense_variant	47.91560031466742	0.327412564698279	5				NaN	NaN	0	NaN	3687	3371	7054
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7061	23.24	NaN	1450.1	30	0	258.93	0.143	+			51474	YVHDDGRVSY	10	51	605.7776670460248	1209.5407811588495	2	605.778564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YVHDDGRVSY_	ENSG00000130755|ENST00000597595|GMFG;ENST00000601731.1_1_19:39819119-39826633:-|nuORF	75.04331003522576	0.23611669241777622	5				NaN	NaN	0	NaN	3688	3371	7054
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7078	23.277	NaN	19751	30	0	2137.4	0.214	+			8850	EENSHLTSV	9	72	508.23807898833167	1014.4616050434634	2	508.23822021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EENSHLTSV_	ENSG00000157557|ENST00000360938|ETS2	166.67852932204877	0.003333876602083393	5				NaN	NaN	0	NaN	3702	3374	7077
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7079	23.281	NaN	3337.5	30	0	1108.1	0.106			+	-1	KKKKCCCK	8	44	361.5268565035077	1081.5587401107232	3	361.5268859863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_KKKKC(Carbamidomethyl (C))CC(Carbamidomethyl (C))K_	REV__ENSG00000143858|ENST00000367268|SYT2;REV__SYT2|p.N94S|1|0.31|ENSG00000143858|chr1:202604519-202604519|T/C|missense_variant	21.9598887501803	0.7897753010812679	5				NaN	NaN	0	NaN	3703	3374	7077
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7080	23.283	NaN	16995	30	0	8907.2	0.106	+			23625	LAPTHLGS	8	56	398.22153144616493	794.4285099591299	2	398.2216491699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LAPTHLGS_	ENST00000533676.5_1_11:61644904-61645258:-|nuORF	42.47446043378293	0.6409579893742323	5				NaN	NaN	0	NaN	3704	3374	7077
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7081	23.285	NaN	1338.4	30	0	161.3	0.106			+	17983	IHKSGDKK	8	54	456.766702888655	911.51885284411	2	456.75201416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IHKSGDKK_	REV__CNTROB|p.L713Cfs*27|1|0.4|ENSG00000170037|chr17:7947710-7947710|T/-|frameshift_variant;REV__ENSG00000170037|ENST00000563694|CNTROB;REV__nc|ENSG00000170037|Q8N137-2|CNTROB;REV__nc|ENSG00000170037|Q8N137-3|CNTROB;REV__nc|ENSG00000170037|Q8N137-4|CNTROB;REV__nc|ENSG00000170037|Q8N137-5|CNTROB	63.30626980617807	0.4690498839812213	5				NaN	NaN	0	NaN	3705	3374	7077
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7082	23.286	NaN	9959.2	30	0	6686.8	0.106	+			321	AAPSAAREL	9	59	443.2430013362906	884.4714497393812	2	443.24267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AAPSAAREL_	ENSG00000107960|ENST00000224950|STN1	90.60085204095205	0.06317133949006545	5				NaN	NaN	0	NaN	3706	3374	7077
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7083	23.288	NaN	2253.8	30	0	530.79	0.035			+	23847	LDARRGIGH	9	50	497.78131803792166	993.5480831426433	2	497.7823181152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LDARRGIGH_	REV__ENST00000585858.1_1_19:11038634-11039324:-|nuORF;REV__ENST00000587943.5_1_19:11038324-11039096:-|nuORF	31.529811441608018	0.5085848003137583	5				NaN	NaN	0	NaN	3707	3374	7077
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7084	23.289	NaN	1466.1	30	0	121.84	0.141			+	19689	KDQLSVQWP	9	53	550.7922973632812	NaN	0	550.7922973632812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KDQLSVQWP_	REV__CON__P00766;REV__ENSG00000168925|ENST00000361017|CTRB1;REV__ENSG00000168928|ENST00000303037|CTRB2	35.61828744233558	0.29773779453147337	5				NaN	NaN	0	NaN	3708	3374	7077
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7098	23.32	NaN	13765	30	0	2344.7	0.214	+			39138	SSVGSVITK	9	68	439.2531391688136	876.4917254044273	2	439.2528076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSVGSVITK_	ENSG00000076554|ENST00000518937|TPD52;ENST00000517445.5_1_8:80962678-80964851:-|nuORF;ENST00000521354.5_1_8:80950353-81083761:-|nuORF;ENST00000522364.5_1_8:80963727-80992703:-|nuORF;nc|ENSG00000076554|P55327-2|TPD52;nc|ENSG00000076554|P55327-3|TPD52;nc|ENSG00000076554|P55327-5|TPD52;nc|ENSG00000076554|P55327-6|TPD52;nc|ENSG00000076554|P55327-7|TPD52;nc|ENSG00000076554|P55327|TPD52;TPD52|p.K164Sfs*5|1|0.09|ENSG00000076554|chr8:80051542-80051542|T/-|frameshift_variant	112.10723106719422	0.02684780151337622	5				NaN	NaN	0	NaN	3719	3377	7097
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7099	23.323	NaN	10292	30	0	2109.4	0.106	+			14609	GTGDVKLLK	9	61	465.7844573685375	929.554361803875	2	465.78424072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTGDVKLLK_	ENSG00000099901|ENST00000430524|RANBP1;ENST00000435265.5_1_22:20106640-20110140:+|nuORF;ENST00000488484.1_1_22:20105172-20110015:+|nuORF;nc|ENSG00000099901|P43487-2|RANBP1;nc|ENSG00000099901|P43487|RANBP1	98.58198989935565	0.04066992115528678	5				NaN	NaN	0	NaN	3720	3377	7097
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7100	23.325	NaN	1803.9	30	0	235.26	0.106			+	40512	STYPSLIY	8	56	472.240490413836	942.4664278944721	2	472.2398681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STYPSLIY_	REV__tr|U7SYR2|U7SYR2_FUSNUPLDphosphodiesterasedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00883PE=4SV=1	44.53106598305862	0.628196326904373	5				NaN	NaN	0	NaN	3721	3377	7097
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7101	23.327	NaN	1685.4	30	0	154.87	0.106	+			1993	AKFAATYF	8	49	459.73907246615016	917.4635919991003	2	459.73907470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AKFAATYF_	ENSG00000137474|ENST00000409709|MYO7A;ENST00000481328.7_1_11:76890894-76905079:+|nuORF;nc|ENSG00000137474|Q13402-2|MYO7A;nc|ENSG00000137474|Q13402-3|MYO7A;nc|ENSG00000137474|Q13402-4|MYO7A;nc|ENSG00000137474|Q13402-5|MYO7A;nc|ENSG00000137474|Q13402-6|MYO7A;nc|ENSG00000137474|Q13402-7|MYO7A;nc|ENSG00000137474|Q13402-8|MYO7A	60.29395666154354	0.49887135096048313	5				NaN	NaN	0	NaN	3722	3377	7097
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7102	23.329	NaN	3164.9	30	0	451.28	0.106	+			42422	TAKSVTCTY	9	62	487.2363054372145	972.4580579412291	2	487.23663330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TAKSVTCTY_	ENSG00000141510|ENST00000269305|TP53;ENST00000505014.5_1_17:7578140-7579834:-|nuORF;nc|ENSG00000141510|P04637-2|TP53;nc|ENSG00000141510|P04637-3|TP53;nc|ENSG00000141510|P04637-4|TP53;nc|ENSG00000141510|P04637-5|TP53;nc|ENSG00000141510|P04637-6|TP53;TP53|p.C229Yfs*10|1|0.59|ENSG00000141510|chr17:7674276-7674277|AC/-|frameshift_variant;TP53|p.C242Afs*5|1|0.54|ENSG00000141510|chr17:7674240-7674240|G/-|frameshift_variant;TP53|p.E198Gfs*11|1|0.43|ENSG00000141510|chr17:7674938-7674939|-/C|frameshift_variant;TP53|p.E336Sfs*9|1|0.15|ENSG00000141510|chr17:7670704-7670704|A/-|frameshift_variant;TP53|p.G302Rfs*4|1|0.13|ENSG00000141510|chr17:7673717-7673718|-/G|frameshift_variant;TP53|p.H178Tfs*69|1|0.68|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant;TP53|p.I195Nfs*14|1|0.81|ENSG00000141510|chr17:7674947-7674948|-/T|frameshift_variant;TP53|p.P151Rfs*27|1|0.46|ENSG00000141510|chr17:7675153-7675160|GGGCGGGG/-|frameshift_variant;TP53|p.P153Afs*28|1|0.62|ENSG00000141510|chr17:7675156-7675157|-/G|frameshift_variant;TP53|p.P301Qfs*44|1|0.5|ENSG00000141510|chr17:7673718-7673718|G/-|frameshift_variant;TP53|p.P322Hfs*23|1|0.53|ENSG00000141510|chr17:7673563-7673563|G/-|frameshift_variant;TP53|p.Q331Sfs*6|1|0.66|ENSG00000141510|chr17:7673537-7673538|-/A|frameshift_variant;TP53|p.R280Kfs*59|1|0.41|ENSG00000141510|chr17:7673763-7673781|TCCTCTGTGCGCCGGTCTC/-|frameshift_variant;TP53|p.R290Kfs*53|1|0.62|ENSG00000141510|chr17:7673747-7673753|CTTGCGG/-|frameshift_variant;TP53|p.R335Lfs*10|1|0.74|ENSG00000141510|chr17:7670705-7670705|C/-|frameshift_variant;TP53|p.S127F|1|0.75|ENSG00000141510|chr17:7675232-7675232|G/A|missense_variant;TP53|p.S127T|1|0.68|ENSG00000141510|chr17:7675233-7675233|A/T|missense_variant	63.53385203322761	0.18415635464017938	5				NaN	NaN	0	NaN	3723	3377	7097
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7103	23.331	NaN	2095.4	30	0	666.17	0.106	+			29634	PGGAGVGP	8	33	306.1610154334722	610.3074779337444	2	306.160888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PGGAGVGP_	ENSG00000166987|ENST00000355673|MBD6;ENST00000493067.5_1_9:135979082-135979694:-|nuORF;MBD6|p.F318Sfs*59|1|0.21|ENSG00000166987|chr12:57525914-57525914|C/-|frameshift_variant;MBD6|p.G877Afs*69|1|0.53|ENSG00000166987|chr12:57528367-57528367|G/-|frameshift_variant;MBD6|p.P443Qfs*44|1|0.22|ENSG00000166987|chr12:57526292-57526292|C/-|frameshift_variant;MBD6|p.P478Hfs*9|1|0.21|ENSG00000166987|chr12:57526575-57526575|C/-|frameshift_variant;MBD6|p.P666Hfs*9|1|0.26|ENSG00000166987|chr12:57527137-57527137|C/-|frameshift_variant;MBD6|p.P671Lfs*4|2|0.31|ENSG00000166987|chr12:57527151-57527151|C/-|frameshift_variant;MBD6|p.P931Lfs*15|1|0.41|ENSG00000166987|chr12:57528528-57528528|C/-|frameshift_variant;MBD6|p.Q694Sfs*5|7|0.43|ENSG00000166987|chr12:57527219-57527219|C/-|frameshift_variant;MBD6|p.Q734Nfs*18|4|0.41|ENSG00000166987|chr12:57527618-57527618|C/-|frameshift_variant;MBD6|p.R878Pfs*26|1|0.34|ENSG00000166987|chr12:57528369-57528406|GGCCGAAAGCCTGGCAGCCGGCGGGAGCCTGGCCGACT/-|frameshift_variant;MBD6|p.S211Lfs*57|1|0.19|ENSG00000166987|chr12:57525594-57525594|C/-|frameshift_variant;MBD6|p.T672Yfs*45|1|0.54|ENSG00000166987|chr12:57527150-57527151|-/C|frameshift_variant	24.504012794735996	0.7701314986472447	5				NaN	NaN	0	NaN	3724	3377	7097
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7104	23.332	NaN	929.85	30	0	140.42	0.037	+			37309	SLDKELMAQK	10	53	581.8085713671511	1161.602589801102	2	581.8093872070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SLDKELMAQK_	ENSG00000058453|ENST00000375541|CROCC;ENST00000426910.1_1_X:134568027-134569581:+|nuORF;ENST00000477773.1_1_1:17274966-17277650:+|nuORF;nc|ENSG00000058453|Q5TZA2-2|CROCC	52.936696900407355	0.4300801048568001	5				NaN	NaN	0	NaN	3725	3377	7097
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7120	23.366	NaN	6927.5	30	0	1223	0.214	+			3676	ASYTKIVVK	9	68	504.8077439905148	1007.6009350478296	2	504.80755615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASYTKIVVK_	ENSG00000141252|ENST00000437048|VPS53;ENST00000541903.6_1_17:422370-426182:-|nuORF	70.41160668669231	0.1390088494582343	5				NaN	NaN	0	NaN	3738	3380	7119
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7121	23.37	NaN	3810.9	30	0	529.46	0.106	+			42701	TDAIFVQR	8	62	475.25799510230416	948.5014372714083	2	475.25823974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TDAIFVQR_	ENSG00000106366|ENST00000223095|SERPINE1;nc|ENSG00000106366|P05121-2|SERPINE1	50.0245360154114	0.5941082100236891	5				NaN	NaN	0	NaN	3739	3380	7119
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7122	23.372	NaN	4849.6	30	0	2237.3	0.106	+			32295	QTNPTYLAK	9	63	518.2770598023283	1034.5395666714564	2	518.2774047851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QTNPTYLAK_	ENSG00000140575|ENST00000268182|IQGAP1;IQGAP1|p.S1529Afs*10|1|0.15|ENSG00000140575|chr15:90492665-90492665|A/-|frameshift_variant	61.691277971877994	0.19951612995419254	5				NaN	NaN	0	NaN	3740	3380	7119
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7123	23.373	NaN	4288.7	30	0	2043.1	0.106			+	9197	EGRAKLQQCGI	11	42	401.5486211528573	1201.624034058772	3	401.5484619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EGRAKLQQCGI_	REV__ENSG00000143851|ENST00000691036|PTPN7;REV__ENST00000492977.5_1_1:202119404-202127449:-|nuORF;REV__nc|ENSG00000143851|P35236-2|PTPN7;REV__nc|ENSG00000143851|P35236-3|PTPN7	26.063383197487333	0.7164075632144343	5				NaN	NaN	0	NaN	3741	3380	7119
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7124	23.375	NaN	1226	30	0	179.2	0.106	+			15143	GTSEGLHLAG	10	45	471.2373962402344	NaN	0	471.2373962402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTSEGLHLAG_	ENSG00000188878|ENST00000636174|FBF1;ENST00000585990.5_1_17:73916156-73934230:-|nuORF;nc|ENSG00000188878|Q8TES7-2|FBF1;nc|ENSG00000188878|Q8TES7-3|FBF1;nc|ENSG00000188878|Q8TES7-4|FBF1;nc|ENSG00000188878|Q8TES7-5|FBF1;nc|ENSG00000188878|Q8TES7|FBF1	37.15910966729921	0.3781637092648983	5				NaN	NaN	0	NaN	3742	3380	7119
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7125	23.377	NaN	1573.6	30	0	132.38	0.038			+	-1	NGNFIALMMGP	11	52	598.7754216569488	1195.5362903806974	2	598.7760620117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Oxidation (M)	_NGNFIALM(Oxidation (M))M(Oxidation (M))GP_	REV__tr|U7SJH0|U7SJH0_FUSNURibosomalRNAsmallsubunitmethyltransferaseGOS=FusobacteriumnucleatumCTI-5OX=1316586GN=rsmGPE=3SV=1	26.69291269510374	0.70980431218767	5				NaN	NaN	0	NaN	3743	3380	7119
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7126	23.378	NaN	2869.6	30	0	880.13	0.146			+	31586	QLSGDTAKEIR	11	39	406.5530616986344	NaN	0	406.8915100097656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QLSGDTAKEIR_	REV__ENSG00000100284|ENST00000449058|TOM1;REV__ENST00000465529.1_1_22:35695897-35713955:+|nuORF;REV__ENST00000487670.1_1_22:35695897-35718132:+|nuORF;REV__nc|ENSG00000100284|O60784-2|TOM1;REV__nc|ENSG00000100284|O60784-3|TOM1	26.749707702089633	0.4462038980881566	5				NaN	NaN	0	NaN	3744	3380	7119
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7141	23.411	NaN	16530	30	0	3636.4	0.214	+			4013	ATCSFSGEK	9	70	465.2051161158924	928.3956792985848	2	465.2049865722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATCSFSGEK_	ENSG00000178163|ENST00000326756|ZNF518B	56.43379154798735	0.2433427591689151	5				NaN	NaN	0	NaN	3756	3383	7140
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7142	23.415	NaN	5645	30	0	1128.3	0.106	+			45270	TVQINQAI	8	62	443.75321334683554	885.4918737604711	2	443.75299072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVQINQAI_	nc|ENSG00000164037|Q4ZJI4-2|SLC9B1;nc|ENSG00000164037|Q4ZJI4-3|SLC9B1	49.44154591367651	0.597725784090933	5				NaN	NaN	0	NaN	3757	3383	7140
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7143	23.417	NaN	7352.8	30	0	1771.6	0.106	+			43259	TEYRRQVQSL	10	74	640.3409724036609	1278.6673918741217	2	640.34130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TEYRRQVQSL_	ENSG00000026025|ENST00000544301|VIM;ENST00000421459.2_2_10:17272631-17276850:+|nuORF	31.529811441608018	0.6223461015008678	5				NaN	NaN	0	NaN	3758	3383	7140
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7144	23.418	NaN	1578.6	30	0	177.24	0.106			+	21980	KSEPSLKRP	9	45	521.3059117917329	1040.5972706502657	2	521.3065185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KSEPSLKRP_	REV__ENST00000417689.5_1_16:66968938-66969016:+|nuORF	45.97224482568171	0.3502073465782774	5				NaN	NaN	0	NaN	3759	3383	7140
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7145	23.42	NaN	6755.5	30	0	1229.9	0.106			+	-1	VMVFPGYPLQL	11	46	427.2299124128168	1278.6679078386505	3	427.22998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_VM(Oxidation (M))VFPGYPLQL_	REV__ENST00000496479.5_1_3:37095344-37107514:-|nuORF	20.83715455343099	0.7712264395190968	5				NaN	NaN	0	NaN	3760	3383	7140
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7146	23.422	NaN	2624.6	30	0	1162.7	0.037			+	26644	LVDSSPTKTAI	11	38	377.8807470485542	1130.6204117458626	3	377.88128662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LVDSSPTKTAI_	REV__ENSG00000102054|ENST00000380087|RBBP7;REV__ENSG00000162521|ENST00000373493|RBBP4;REV__ENST00000401893.7_1_1:33116898-33134028:+|nuORF;REV__ENST00000486166.1_1_X:16871803-16876886:-|nuORF;REV__nc|ENSG00000102054|Q16576-2|RBBP7;REV__nc|ENSG00000162521|Q09028-2|RBBP4;REV__nc|ENSG00000162521|Q09028-3|RBBP4;REV__nc|ENSG00000162521|Q09028-4|RBBP4	20.94693142431847	0.7700749696703488	5				NaN	NaN	0	NaN	3761	3383	7140
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7147	23.423	NaN	979.4	30	0	91.304	0.138			+	33564	RLGEPPAPG	9	46	447.2455556104674	892.4765582877349	2	447.2450256347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RLGEPPAPG_	REV__ENSG00000042781|ENST00000307340|USH2A;REV__nc|ENSG00000042781|O75445-3|USH2A;REV__USH2A|p.E5096Gfs*82|1|0.44|ENSG00000042781|chr1:215634469-215634470|-/C|frameshift_variant;REV__USH2A|p.R4729I|1|0.23|ENSG00000042781|chr1:215650749-215650749|C/A|missense_variant	40.5726180659479	0.4135428067754104	5				NaN	NaN	0	NaN	3762	3383	7140
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7162	23.456	NaN	20414	30	0	1839.6	0.214	+			40763	SVDKLVIQK	9	89	515.3186601042598	1028.6227672753196	2	515.3189086914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVDKLVIQK_	ENST00000523612.1_1_8:142469282-142469963:+|nuORF	195.04605151776784	5.427472092243166E-05	5				NaN	NaN	0	NaN	3774	3386	7161
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7163	23.46	NaN	12517	30	0	3635.7	0.106			+	37248	SKVDLVIKQ	9	67	343.88157081621785	NaN	0	343.8815612792969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SKVDLVIKQ_	REV__tr|U7ST90|U7ST90_FUSNUYkuDdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01333PE=4SV=1	75.04331003522576	0.0883683072398826	5				NaN	NaN	0	NaN	3775	3386	7161
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7164	23.461	NaN	1978.4	30	0	728.21	0.106				-1	 	0	57	508.2745477691646	507.2672713025646	1	508.27459716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3776	3386	7161
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7165	23.463	NaN	8893.7	30	0	1639.1	0.106	+			36410	SETNDTKVL	9	71	503.755935161629	1005.497317390058	2	503.755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SETNDTKVL_	ENSG00000111057|ENST00000388835|KRT18;ENST00000453838.2_1_1:182928211-182928406:-|nuORF	106.68306549817024	0.032382560583716295	5				NaN	NaN	0	NaN	3777	3386	7161
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7166	23.465	NaN	3028.6	30	0	781.25	0.106	+			26434	LTGPPGVGK	9	52	413.2450363208412	824.4755197084825	2	413.24481201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LTGPPGVGK_	ENSG00000135778|ENST00000366628|NTPCR	35.61828744233558	0.47037581924408073	5				NaN	NaN	0	NaN	3778	3386	7161
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7167	23.467	NaN	2696.4	30	0	1124.7	0.106	+			36694	SGQSALYD	8	40	420.69012354666893	839.3656941601379	2	420.6900329589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SGQSALYD_	ENSG00000153165|ENST00000409886|RGPD3;ENSG00000153201|ENST00000283195|RANBP2;ENSG00000196862|ENST00000408999|RGPD4;RANBP2|p.A864Lfs*3|1|0.3|ENSG00000153201|chr2:108758533-108758533|G/-|frameshift_variant;RANBP2|p.C2737Vfs*35|1|0.18|ENSG00000153201|chr2:108772957-108772957|T/-|frameshift_variant;RANBP2|p.F3068Lfs*10|1|0.06|ENSG00000153201|chr2:108782692-108782692|T/-|frameshift_variant;RANBP2|p.H3114Sfs*18|1|0.33|ENSG00000153201|chr2:108782827-108782828|-/T|frameshift_variant;RANBP2|p.K1989Nfs*9|1|0.05|ENSG00000153201|chr2:108766505-108766506|-/TATCCTG|frameshift_variant;RANBP2|p.K2576Nfs*63|2|0.22|ENSG00000153201|chr2:108768262-108768262|A/-|frameshift_variant;RANBP2|p.L389_F390insKKKFKL|1|0.03|ENSG00000153201|chr2:108749023-108749024|-/AAAAAAAAATTTAAGTTA|inframe_insertion;RANBP2|p.S1486Rfs*51|1|0.05|ENSG00000153201|chr2:108764996-108764997|-/ATTTTGTATTC|frameshift_variant;RGPD3|p.V1441*|1|0.45|ENSG00000153165|chr2:106423647-106423647|T/-|frameshift_variant;RGPD4|p.K568Nfs*33|1|0.14|ENSG00000196862|chr2:107859787-107859787|A/-|frameshift_variant	29.14955571784316	0.7342621283720113	5				NaN	NaN	0	NaN	3779	3386	7161
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7168	23.469	NaN	3407.4	30	0	1870.8	0.034	+			2230	ALSGKPSGSH	10	48	470.7458167575327	939.4770805818654	2	470.7457275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ALSGKPSGSH_	ENST00000578730.1_1_4:1243983-1244322:+|nuORF	31.529811441608018	0.6223461015008678	5				NaN	NaN	0	NaN	3780	3386	7161
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7181	23.496	NaN	3140.1	30	0	669.25	0.214			+	16399	HEQLSRSL	8	58	485.2591080190861	968.5036631049722	2	485.25921630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HEQLSRSL_	REV__ENSG00000189350|ENST00000379558|TOGARAM2;REV__nc|ENSG00000189350|Q6ZUX3-2|TOGARAM2	67.49366992349736	0.4277823096851425	5				NaN	NaN	0	NaN	3790	3389	7180
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7182	23.5	NaN	3281.9	30	0	829.12	0.106			+	50957	YIGLKQKTT	9	44	351.2094244612551	NaN	0	351.20965576171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YIGLKQKTT_	REV__ENSG00000096696|ENST00000379802|DSP;REV__nc|ENSG00000096696|P15924-2|DSP;REV__nc|ENSG00000096696|P15924-3|DSP	17.364965105453717	0.37820932774828947	5				NaN	NaN	0	NaN	3791	3389	7180
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7183	23.502	NaN	2740.6	30	0	458.29	0.106	+			23447	LADPSAKAV	9	45	436.2478342889296	870.4811156446592	2	436.2477111816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LADPSAKAV_	ENSG00000107854|ENST00000371627|TNKS2;ENSG00000173273|ENST00000310430|TNKS;nc|ENSG00000173273|O95271-2|TNKS;TNKS|p.N555Kfs*2|1|0.29|ENSG00000173273|chr8:9710033-9710034|-/A|frameshift_variant;TNKS2|p.K349Nfs*8|1|0.47|ENSG00000107854|chr10:91828344-91828344|A/-|frameshift_variant;TNKS2|p.M193*|1|0.31|ENSG00000107854|chr10:91819496-91819496|A/-|frameshift_variant;TNKS2|p.N622Tfs*29|1|0.33|ENSG00000107854|chr10:91842189-91842189|A/-|frameshift_variant	90.60085204095205	0.06317133949006545	5				NaN	NaN	0	NaN	3792	3389	7180
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7184	23.503	NaN	2476.6	30	0	175.88	0.106			+	-1	TALAALIAPC	10	61	500.7788706642278	999.5431883952556	2	500.7795104980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_TALAALIAPC(Carbamidomethyl (C))_	REV__ENSG00000110628|ENST00000649076|SLC22A18;REV__ENST00000467719.5_1_11:2937762-2940985:+|nuORF	45.9519527083369	0.4943008177357963	5				NaN	NaN	0	NaN	3793	3389	7180
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7185	23.505	NaN	3249.5	30	0	877.04	0.106	+			31832	QPRENPFQN	9	63	565.2736007251523	1128.5326485171045	2	565.2739868164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QPRENPFQN_	ENSG00000067369|ENST00000382044|TP53BP1;ENST00000411772.5_2_15:43699583-43738985:-|nuORF;nc|ENSG00000067369|Q12888-3|TP53BP1;nc|ENSG00000067369|Q12888|TP53BP1	52.936696900407355	0.27249468807391813	5				NaN	NaN	0	NaN	3794	3389	7180
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7186	23.507	NaN	2130.2	30	0	589.05	0.106			+	47004	VKVDTASK	8	51	424.2475812236759	846.4806095141519	2	424.2476806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VKVDTASK_	REV__ENSG00000091136|ENST00000222399|LAMB1;REV__ENST00000472714.1_1_7:107564398-107569844:-|nuORF;REV__LAMB1|p.T1709Lfs*22|3|0.29|ENSG00000091136|chr7:107924329-107924329|T/-|frameshift_variant	51.33545320467046	0.5859736979383976	5				NaN	NaN	0	NaN	3795	3389	7180
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7187	23.509	NaN	1569	30	0	157.28	0.034	+			46039	VCADSRANI	9	58	474.73154578745124	NaN	0	474.7309265136719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VCADSRANI_	CILP2|p.P1036Hfs*17|1|0.12|ENSG00000160161|chr19:19545647-19545647|C/-|frameshift_variant;ENSG00000160161|ENST00000291495|CILP2	44.116797842482775	0.2472372736944149	5				NaN	NaN	0	NaN	3796	3389	7180
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7200	23.536	NaN	5594.3	30	0	731.33	0.215	+			2253	ALTSGIASSP	10	62	452.24266099732773	902.4707690614555	2	453.2469787597656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ALTSGIASSP_	AGBL5|p.R813Gfs*68|1|0.4|ENSG00000084693|chr2:27069649-27069649|C/-|frameshift_variant;ENSG00000084693|ENST00000360131|AGBL5;ENST00000477136.5_1_2:27275826-27278122:+|nuORF;ENST00000489683.5_1_2:27275826-27279072:+|nuORF;nc|ENSG00000084693|Q8NDL9-2|AGBL5;nc|ENSG00000084693|Q8NDL9-3|AGBL5	37.15910966729921	0.575322462179216	5				NaN	NaN	0	NaN	3806	3392	7199
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7201	23.54	NaN	4847.1	30	0	2206.8	0.106	+			10520	EVYHTTVLK	9	66	545.301633349814	1088.5887137664279	2	545.302490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EVYHTTVLK_	ENST00000396185.7_1_3:41241009-41266025:+|nuORF;ENST00000453024.5_1_3:41241021-41265725:+|nuORF	64.20726635412375	0.17854274437659667	5				NaN	NaN	0	NaN	3807	3392	7199
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7202	23.542	NaN	3422.5	30	0	313.53	0.106	+			38007	SPLKTTSSY	9	57	492.25579899227296	NaN	0	492.25555419921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SPLKTTSSY_	ENSG00000124429|ENST00000262753|POF1B;nc|ENSG00000124429|Q8WVV4-1|POF1B;nc|ENSG00000124429|Q8WVV4-3|POF1B;POF1B|p.T130Lfs*12|1|0.14|ENSG00000124429|chrX:85359600-85359601|-/AG|frameshift_variant	106.68306549817024	0.012692596758972883	5				NaN	NaN	0	NaN	3808	3392	7199
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7203	23.543	NaN	3018.2	30	0	437.89	0.106	+			35843	SEDEPTRSL	9	66	517.2430700200653	1032.4715871069304	2	517.2435302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SEDEPTRSL_	ENSG00000083312|ENST00000337273|TNPO1;ENSG00000105576|ENST00000425528|TNPO2;ENST00000588484.1_1_19:12826020-12830096:-|nuORF;ENST00000589956.5_1_19:12822112-12831764:-|nuORF;nc|ENSG00000083312|Q92973-2|TNPO1;nc|ENSG00000105576|O14787-2|TNPO2;TNPO1|p.C844Vfs*45|4|0.31|ENSG00000083312|chr5:72903718-72903718|T/-|frameshift_variant;TNPO2|p.H347Pfs*4|1|0.35|ENSG00000105576|chr19:12711373-12711374|-/G|frameshift_variant	58.22992032128504	0.22837015374068087	5				NaN	NaN	0	NaN	3809	3392	7199
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7204	23.545	NaN	4868.4	30	0	759.06	0.106	+			16473	HETGTKITI	9	68	500.2771129927734	NaN	0	500.2768249511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HETGTKITI_	ENSG00000073792|ENST00000382199|IGF2BP2;ENST00000496495.1_1_3:185393074-185393625:-|nuORF;ENST00000550858.1_1_12:42681476-42682067:+|nuORF;nc|ENSG00000073792|Q9Y6M1-1|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-3|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-4|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-5|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-6|IGF2BP2	127.46168284122857	0.0009793558177450096	5				NaN	NaN	0	NaN	3810	3392	7199
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7205	23.547	NaN	9890.3	30	0	4439.1	0.106	+			47973	VSPDAKTSL	9	50	459.25032616979144	916.4860994063829	2	459.2500305175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VSPDAKTSL_	ENSG00000080200|ENST00000389622|CRYBG3	37.81151784470057	0.4459294069877048	5				NaN	NaN	0	NaN	3811	3392	7199
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7206	23.549	NaN	5845.8	30	0	1477.3	0.035	+			32497	QVQAAQFAK	9	56	495.77182208882545	989.5290912444509	2	495.7720642089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QVQAAQFAK_	ENSG00000135441|ENST00000548925|BLOC1S1;nc|ENSG00000135441|P78537-2|BLOC1S1	94.00642277110589	0.05356993013874309	5				NaN	NaN	0	NaN	3812	3392	7199
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7223	23.584	NaN	38932	30	0	13460	0.214	+			18032	IINSSITTK	9	71	488.7871618880013	975.5597708428027	2	488.7870178222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IINSSITTK_	CCT3|p.A379Lfs*9|1|0.21|ENSG00000163468|chr1:156312061-156312061|C/-|frameshift_variant;CCT3|p.K197Nfs*23|1|0.17|ENSG00000163468|chr1:156320857-156320857|T/-|frameshift_variant;CCT3|p.L350Ffs*9|1|0.49|ENSG00000163468|chr1:156312146-156312147|-/A|frameshift_variant;ENSG00000163468|ENST00000295688|CCT3;nc|ENSG00000163468|P49368-2|CCT3	178.54760496737404	0.0014418427517892064	5				NaN	NaN	0	NaN	3826	3395	7222
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7224	23.588	NaN	5661.7	30	0	837.29	0.106			+	17366	IALTHGKQY	9	66	515.7874449397553	1029.5603369463106	2	515.787841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IALTHGKQY_	REV__ENSG00000184995|ENST00000448696|IFNE	51.33545320467046	0.2872990594074956	5				NaN	NaN	0	NaN	3827	3395	7222
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7225	23.59	NaN	1130.9	30	0	147.61	0.106	+			34378	RTRLREVS	8	60	508.7999725969703	NaN	0	508.79937744140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RTRLREVS_	ENST00000579991.2_1_17:56160812-56164456:+|nuORF	49.44154591367651	1.7418937515398478	5				NaN	NaN	0	NaN	3828	3395	7222
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7226	23.591	NaN	1053.6	30	0	197.22	0.106	+			29627	PGATTPLPK	9	41	441.25804679811887	880.5015406630378	2	441.2579040527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PGATTPLPK_	ENST00000277746.10_1_10:64893073-64911919:+|nuORF;nc|ENSG00000148572|Q96F24-3|NRBF2	44.116797842482775	0.37197099687881774	5				NaN	NaN	0	NaN	3829	3395	7222
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7227	23.593	NaN	1039.4	30	0	247.17	0.106			+	48134	VSVRGFPATEE	11	44	596.3056767674223	1190.5968006016444	2	596.3060913085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSVRGFPATEE_	REV__sp|Q6SWA0|UL31_HCMVMProteinUL31OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL31PE=3SV=1	28.081489160057373	0.6952392775027776	5				NaN	NaN	0	NaN	3830	3395	7222
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7228	23.595	NaN	1157.3	30	0	156.3	0.035				-1	ANMLAGMLLG	10	51	511.75505475097555	NaN	0	511.7894592285156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Oxidation (M)	_ANM(Oxidation (M))LAGM(Oxidation (M))LLG_	ENSG00000105784|ENST00000394654|RUNDC3B;nc|ENSG00000105784|Q96NL0-2|RUNDC3B;nc|ENSG00000105784|Q96NL0-4|RUNDC3B;nc|ENSG00000105784|Q96NL0|RUNDC3B	29.14955571784316	0.4044631218331212	5				NaN	NaN	0	NaN	3831	3395	7222
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7242	23.625	NaN	26055	30	0	6703.5	0.214	+			39410	STDPSVLGK	9	85	452.24266099732773	902.4707690614555	2	452.2424621582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STDPSVLGK_	ENSG00000114315|ENST00000232424|HES1;HES1|p.Y110C|1|0.27|ENSG00000114315|chr3:194137719-194137719|A/G|missense_variant	109.47833844074708	0.029530294723441826	5				NaN	NaN	0	NaN	3842	3398	7241
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7243	23.628	NaN	6931.6	30	0	1466.4	0.106	+			27154	MCIKFSSV	8	65	465.72494517250664	929.4353374118133	2	465.72479248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_M(Oxidation (M))CIKFSSV_	ENST00000389737.4_2_4:8448277-8451409:+|nuORF;nc|ENSG00000155275|Q8IYL2-2|TRMT44	42.47446043378293	0.6409579893742323	5				NaN	NaN	0	NaN	3843	3398	7241
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7244	23.63	NaN	3937.8	30	0	870.53	0.036			+	1752	AIAEGQGHKEA	11	63	555.7829998400845	NaN	0	555.7828979492188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AIAEGQGHKEA_	REV__tr|U7SYB5|U7SYB5_FUSNUAcetyl-coenzymeAcarboxylasecarboxyltransferasesubunitalphaOS=FusobacteriumnucleatumCTI-5OX=1316586GN=accAPE=3SV=1	45.908116695636124	0.34470816508309304	5				NaN	NaN	0	NaN	3844	3398	7241
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7260	23.664	NaN	3107.6	30	0	866.59	0.214	+			2896	ASATALVSR	9	54	438.2516070179149	874.4886611026299	2	438.2508850097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASATALVSR_	ENSG00000167491|ENST00000683918|GATAD2A;nc|ENSG00000167491|Q86YP4-2|GATAD2A;nc|ENSG00000167491|Q86YP4|GATAD2A	78.26377905018397	0.10505600812668463	5				NaN	NaN	0	NaN	3857	3401	7259
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7261	23.667	NaN	2451	30	0	273.57	0.035	+			39400	STDPAAPNLK	10	54	507.26672307227096	1012.518893211342	2	507.2667236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STDPAAPNLK_	ENSG00000137076|ENST00000314888|TLN1;nc|ENSG00000137076|Q9Y490-2|TLN1;TLN1|p.P1628Rfs*20|1|0.44|ENSG00000137076|chr9:35707144-35707144|G/-|frameshift_variant	72.87924865735499	0.25379688738724415	5				NaN	NaN	0	NaN	3858	3401	7259
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7274	23.695	NaN	7881.4	30	0	1521.8	0.214	+			13789	GQHTVLLVK	9	57	497.80546480884385	993.5963766844877	2	497.8057556152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GQHTVLLVK_	ENSG00000180198|ENST00000683442|RCC1;nc|ENSG00000180198|P18754-2|RCC1	139.38205640894643	0.01076996779551382	5				NaN	NaN	0	NaN	3868	3404	7273
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7275	23.698	NaN	4216.3	30	0	476.31	0.106			+	26465	LTIVIERE	8	63	486.78946808121	971.56438322922	2	486.7898254394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LTIVIERE_	REV__ADGRV1|p.A1698Nfs*28|1|0.13|ENSG00000164199|chr5:90674214-90674215|-/GAACATATATATTC|frameshift_variant;REV__ADGRV1|p.F5465Lfs*13|1|0.26|ENSG00000164199|chr5:90828964-90828964|T/-|frameshift_variant;REV__ADGRV1|p.G3807Dfs*10|1|0.16|ENSG00000164199|chr5:90755021-90755021|A/-|frameshift_variant;REV__ADGRV1|p.L4664Cfs*23|1|0.28|ENSG00000164199|chr5:90789790-90789790|A/-|frameshift_variant;REV__ADGRV1|p.N3627Ifs*14|1|0.34|ENSG00000164199|chr5:90745697-90745697|A/-|frameshift_variant;REV__ADGRV1|p.S1982Ffs*2|1|0.3|ENSG00000164199|chr5:90683859-90683860|-/T|frameshift_variant;REV__ADGRV1|p.S2670Rfs*9|1|0.05|ENSG00000164199|chr5:90697000-90697001|-/GCCCAAAATAATT|frameshift_variant;REV__ADGRV1|p.T5738Pfs*48|1|0.19|ENSG00000164199|chr5:90853288-90853288|A/-|frameshift_variant;REV__ADGRV1|p.Y1610Tfs*36|1|0.42|ENSG00000164199|chr5:90672616-90672616|T/-|frameshift_variant;REV__ADGRV1|p.Y5091Tfs*7|2|0.25|ENSG00000164199|chr5:90810525-90810525|T/-|frameshift_variant;REV__ENSG00000164199|ENST00000405460|ADGRV1;REV__ENST00000504142.2_2_5:89924394-89949789:+|nuORF;REV__nc|ENSG00000164199|Q8WXG9-3|ADGRV1;REV__nc|ENSG00000164199|Q8WXG9-4|ADGRV1	79.71258880314673	0.32596852995588826	5				NaN	NaN	0	NaN	3869	3404	7273
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7276	23.7	NaN	3615.6	30	0	955.68	0.106	+			41874	SVTHSVPV	8	38	413.2267693554018	824.4389857776036	2	413.22698974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVTHSVPV_	ENST00000379598.9_1_20:3786205-3786352:+|nuORF	26.79610172149135	0.7524337208463756	5				NaN	NaN	0	NaN	3870	3404	7273
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7277	23.702	NaN	2395	30	0	357.84	0.106			+	17197	HTVLSAQYK	9	61	523.7856208310403	NaN	0	523.7852783203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HTVLSAQYK_	REV__ENSG00000263528|ENST00000581977|IKBKE;REV__nc|ENSG00000263528|Q14164-2|IKBKE	45.97224482568171	0.23445038899310136	5				NaN	NaN	0	NaN	3871	3404	7273
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7278	23.704	NaN	1919.8	30	0	469.13	0.106			+	31866	QPVLPQNIV	9	63	504.2981804166085	1006.581807900017	2	504.2975158691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QPVLPQNIV_	REV__ENSG00000215041|ENST00000399464|NEURL4;REV__nc|ENSG00000215041|Q96JN8-2|NEURL4;REV__NEURL4|p.L1256Cfs*12|2|0.27|ENSG00000215041|chr17:7318594-7318594|C/-|frameshift_variant	45.9519527083369	0.35044536499095585	5				NaN	NaN	0	NaN	3872	3404	7273
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7279	23.706	NaN	3081.5	30	0	405.77	0.037	+			33575	RLKLLAHLSP	10	47	383.247186136587	NaN	0	382.9129638671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RLKLLAHLSP_	ENST00000458578.6_1_22:21976769-21977039:+|nuORF	28.081489160057373	0.40797012399963245	5				NaN	NaN	0	NaN	3873	3404	7273
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7280	23.706	NaN	1113	30	0	205.9	0.14			+	-1	LDSVCGERT	9	49	518.7421371017803	NaN	0	518.742431640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_LDSVC(Carbamidomethyl (C))GERT_	REV__ENST00000512792.2_1_12:112191278-112193633:+|nuORF	34.172542307311794	0.30503706118289736	5				NaN	NaN	0	NaN	3874	3404	7273
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7293	23.735	NaN	5891.9	30	0	704.62	0.215	+			15528	GVDDKFYSK	9	72	529.7609576106273	1057.5073622880545	2	529.7621459960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVDDKFYSK_	ENSG00000105254|ENST00000221855|TBCB;ENST00000392178.8_1_19:36606435-36612715:+|nuORF;ENST00000481742.1_1_19:36606435-36607215:+|nuORF;ENST00000589308.1_1_19:36606815-36612715:+|nuORF;nc|ENSG00000105254|Q99426-2|TBCB	99.01295224348159	0.040209060045561164	5				NaN	NaN	0	NaN	3884	3407	7292
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7294	23.739	NaN	1400.9	30	0	197.44	0.106	+			46273	VEHHLFTLA	9	53	533.7860717773438	NaN	0	533.7860717773438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VEHHLFTLA_	PTPN13|p.A614T|1|0.2|ENSG00000163629|chr4:86732748-86732748|G/A|missense_variant	24.20275056022122	0.35506675290109213	5				NaN	NaN	0	NaN	3885	3407	7292
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7295	23.741	NaN	1179	30	0	160.6	0.037			+	33203	RFALPFEIQ	9	48	560.8093564444001	NaN	0	560.8095703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RFALPFEIQ_	REV__ENST00000542466.2_1_12:58120838-58121579:+|nuORF	39.252832667884924	0.27938773122138094	5				NaN	NaN	0	NaN	3886	3407	7292
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7309	23.771	NaN	22929	30	0	15298	0.214	+			15529	GVDDKFYSK	9	56	353.5098678918391	1057.5077742757173	3	353.5097961425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVDDKFYSK_	ENSG00000105254|ENST00000221855|TBCB;ENST00000392178.8_1_19:36606435-36612715:+|nuORF;ENST00000481742.1_1_19:36606435-36607215:+|nuORF;ENST00000589308.1_1_19:36606815-36612715:+|nuORF;nc|ENSG00000105254|Q99426-2|TBCB	52.936696900407355	0.27249468807391813	5				NaN	NaN	0	NaN	3897	3410	7308
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7310	23.774	NaN	8806.4	30	0	1193.1	0.106	+			14870	GTLNQPLTK	9	71	486.279523254083	NaN	0	486.2793273925781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTLNQPLTK_	ENSG00000103671|ENST00000261884|TRIP4	99.01295224348159	0.023427377858318825	5				NaN	NaN	0	NaN	3898	3410	7308
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7311	23.776	NaN	2978.4	30	0	424.84	0.106	+			24224	LESGKIAV	8	57	408.74473980029666	815.4749266673933	2	408.7445983886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LESGKIAV_	ENSG00000278023|ENST00000620284|RDM1;nc|ENSG00000278023|Q8NG50-2|RDM1	60.97194046774394	0.49215940876911696	5				NaN	NaN	0	NaN	3899	3410	7308
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7312	23.778	NaN	1847.1	30	0	372.53	0.106	+			29382	PALVLTSQK	9	57	478.79173608492965	NaN	0	479.27130126953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PALVLTSQK_	ENSG00000213901|ENST00000409878|SLC23A3;nc|ENSG00000213901|Q6PIS1-2|SLC23A3;nc|ENSG00000213901|Q6PIS1-5|SLC23A3	25.57405402267927	0.3484490411150625	5				NaN	NaN	0	NaN	3900	3410	7308
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7313	23.78	NaN	1730.9	30	0	936.71	0.106	+			8916	EEVKDRCTL	9	52	546.7711541846346	1091.5277554360691	2	546.7721557617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EEVKDRCTL_	ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65622809-65623088:-|nuORF	33.921630207806714	0.48623198279849766	5				NaN	NaN	0	NaN	3901	3410	7308
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7314	23.782	NaN	959.01	30	0	149.12	0.035	+			46967	VKKEPRQL	8	48	499.3108766394392	996.6072003456784	2	500.301025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VKKEPRQL_	ENSG00000146904|ENST00000275815|EPHA1;ENST00000488068.5_1_7:143088552-143095662:-|nuORF	32.81241826257853	0.7059802730411993	5				NaN	NaN	0	NaN	3902	3410	7308
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7315	23.782	NaN	1504.1	30	0	231.91	0.138			+	28562	NKELLAQA	8	45	443.75321334683554	885.4918737604711	2	443.75323486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NKELLAQA_	REV__ENSG00000155959|ENST00000286428|VBP1;REV__nc|ENSG00000155959|P61758-2|VBP1	38.80614096846853	0.6637206697844082	5				NaN	NaN	0	NaN	3903	3410	7308
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7333	23.821	NaN	3578	30	0	507.86	0.214	+			41193	SVLDKSLTK	9	53	495.7949653084236	989.5753776836473	2	495.7950744628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVLDKSLTK_	ENSG00000198265|ENST00000358691|HELZ;ENST00000578938.1_1_17:65172688-65184471:-|nuORF;HELZ|p.L1089Ffs*20|1|0.05|ENSG00000198265|chr17:67128771-67128772|-/GTTAATG|frameshift_variant;nc|ENSG00000198265|P42694-2|HELZ	61.691277971877994	0.19951612995419254	5				NaN	NaN	0	NaN	3918	3413	7332
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7334	23.825	NaN	3145.4	30	0	524.51	0.106			+	41186	SVLDEGPW	8	63	451.7161161550551	901.4176793769102	2	451.71624755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVLDEGPW_	REV__ENST00000466764.5_1_X:48434327-48435471:+|nuORF;REV__ENST00000485213.1_1_X:48434327-48434552:+|nuORF	42.47446043378293	0.6409579893742323	5				NaN	NaN	0	NaN	3919	3413	7332
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7335	23.827	NaN	3673.4	30	0	811.14	0.106	+			37083	SISGPISTSK	10	62	488.7687824753836	975.5230120175672	2	488.76885986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SISGPISTSK_	ENSG00000100014|ENST00000314328|SPECC1L;nc|ENSG00000100014|Q69YQ0-2|SPECC1L	49.536043120802724	0.461275219792494	5				NaN	NaN	0	NaN	3920	3413	7332
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7336	23.829	NaN	2065.4	30	0	263.12	0.106	+			41339	SVLTGTQSLL	10	66	509.79207408284606	1017.5695952324921	2	509.7918395996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVLTGTQSLL_	ENST00000559530.1_1_15:32058089-32058740:-|nuORF	42.86426827375447	0.522752283233888	5				NaN	NaN	0	NaN	3921	3413	7332
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7337	23.831	NaN	2833.3	30	0	328.99	0.106	+			37318	SLDSNYDVLP	10	59	561.7677077062089	1121.5208624792176	2	561.7681884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SLDSNYDVLP_	ENST00000575812.1_1_16:3358749-3362115:+|nuORF	54.776311868738084	0.41334902933431344	5				NaN	NaN	0	NaN	3922	3413	7332
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7338	23.832	NaN	1079.5	30	0	258.58	0.037				-1	TESKNRQQM	9	44	569.2699527610848	NaN	0	569.2698364257812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_TESKNRQQM(Oxidation (M))_	ENSG00000110427|ENST00000658780|KIAA1549L;nc|ENSG00000110427|Q6ZVL6|KIAA1549L	34.172542307311794	0.30503706118289736	5				NaN	NaN	0	NaN	3923	3413	7332
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7339	23.833	NaN	3967.9	30	0	580.89	0.14	+			4428	ATIEETYSK	9	64	521.2583575746058	1040.5021622160116	2	521.2586669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATIEETYSK_	ENSG00000130475|ENST00000596536|FCHO1;ENST00000601247.5_1_19:17858586-17877404:+|nuORF;FCHO1|p.A50V|1|0.36|ENSG00000130475|chr19:17764404-17764404|C/T|missense_variant;nc|ENSG00000130475|O14526-2|FCHO1	91.26522074875469	0.06129826844580791	5				NaN	NaN	0	NaN	3924	3413	7332
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7356	23.87	NaN	30150	30	0	17409	0.214			+	-1	SVMMPKHSKKR	11	65	454.24565648379286	1359.7151400515786	3	454.24517822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_SVM(Oxidation (M))M(Oxidation (M))PKHSKKR_	REV__ENST00000591956.1_1_17:74557657-74557777:+|nuORF	29.550750289552195	0.6798279264880025	5				NaN	NaN	0	NaN	3938	3416	7355
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7357	23.874	NaN	1895.5	30	0	261.43	0.106			+	29913	PLQLRAPA	8	50	433.2661665673334	NaN	0	433.26611328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PLQLRAPA_	REV__ENST00000598675.1_1_19:7997268-7998765:-|nuORF	28.2542754592877	1.7418937515398478	5				NaN	NaN	0	NaN	3939	3416	7355
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7358	23.876	NaN	3167.7	30	0	714.57	0.106	+			29104	NTNIPIGNK	9	59	485.7703431342506	969.5261333353012	2	485.7691345214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NTNIPIGNK_	ENSG00000115464|ENST00000398571|USP34;nc|ENSG00000115464|Q70CQ2-2|USP34;nc|ENSG00000115464|Q70CQ2-3|USP34;USP34|p.L2716Sfs*30|1|0.05|ENSG00000115464|chr2:61214596-61214597|-/AAGCTGA|frameshift_variant;USP34|p.L3228*|1|0.22|ENSG00000115464|chr2:61190564-61190564|A/-|frameshift_variant;USP34|p.N788Kfs*4|1|0.42|ENSG00000115464|chr2:61343951-61343952|-/T|frameshift_variant;USP34|p.N788Yfs*3|1|0.09|ENSG00000115464|chr2:61343952-61343953|TT/-|frameshift_variant	49.44154591367651	0.3095138337212152	5				NaN	NaN	0	NaN	3940	3416	7355
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7359	23.877	NaN	1145.7	30	0	149.62	0.106	+			29712	PHGVVTAN	8	43	397.7116267857441	NaN	0	397.7113952636719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PHGVVTAN_	P4HB|p.N387Tfs*118|1|0.25|ENSG00000185624|chr17:81845888-81845888|T/-|frameshift_variant	26.79610172149135	1.7418937515398478	5				NaN	NaN	0	NaN	3941	3416	7355
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7360	23.879	NaN	2060.1	30	0	510.33	0.106	+			2394	ANTDVFLSK	9	49	497.763619818811	993.512686704422	2	497.76361083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ANTDVFLSK_	ENSG00000122378|ENST00000606162|PRXL2A;nc|ENSG00000122378|Q9BRX8-2|PRXL2A	32.81241826257853	0.4965981579233955	5				NaN	NaN	0	NaN	3942	3416	7355
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7361	23.881	NaN	2783.4	30	0	536.4	0.038	+			10950	FDVKSGSAVHK	11	57	392.2121341971673	NaN	0	392.2118835449219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FDVKSGSAVHK_	ENSG00000141076|ENST00000314423|UTP4;nc|ENSG00000141076|Q969X6-2|UTP4;nc|ENSG00000141076|Q969X6-3|UTP4	33.03940026070387	0.41817340257782254	5				NaN	NaN	0	NaN	3943	3416	7355
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7362	23.882	NaN	4921	30	0	891.15	0.14	+			8031	DTTHEAATY	9	63	504.71712998750473	1007.4197070418095	2	504.7172546386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DTTHEAATY_	ENSG00000136636|ENST00000259154|KCTD3;nc|ENSG00000136636|Q9Y597-2|KCTD3	55.50420428727701	0.2510918378945873	5				NaN	NaN	0	NaN	3944	3416	7355
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7374	23.909	NaN	2945.3	30	0	674.76	0.214			+	17092	HSDAVVAL	8	40	406.2186246236618	810.4226963141236	2	406.716552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HSDAVVAL_	REV__ZMAT4|p.S86L|1|0.27|ENSG00000165061|chr8:40697337-40697337|G/A|missense_variant	23.036711822280957	0.7814608874307191	5				NaN	NaN	0	NaN	3953	3419	7373
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7375	23.912	NaN	4832.3	30	0	1174.8	0.106	+			18891	IVKSTEANVL	10	62	537.31422275354	1072.6138925738799	2	537.3134155273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IVKSTEANVL_	ENSG00000124789|ENST00000262077|NUP153;nc|ENSG00000124789|P49790-2|NUP153;nc|ENSG00000124789|P49790-3|NUP153;NUP153|p.E1073Kfs*44|1|0.07|ENSG00000124789|chr6:17628983-17628983|T/-|frameshift_variant	70.39856735676683	0.27406383984062843	5				NaN	NaN	0	NaN	3954	3419	7373
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7376	23.914	NaN	1748.7	30	0	245.78	0.106	+			17126	HSPGAVSSL	9	40	427.7219723312632	853.4293917293264	2	427.7215881347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HSPGAVSSL_	ENSG00000163026|ENST00000295148|WDCP;nc|ENSG00000163026|Q9H6R7-3|WDCP	44.116797842482775	0.37197099687881774	5				NaN	NaN	0	NaN	3955	3419	7373
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7377	23.916	NaN	3921	30	0	407.75	0.106	+			12424	GEAQVGKTSL	10	69	495.2670613034802	988.5195696737604	2	495.2668762207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEAQVGKTSL_	ENSG00000140983|ENST00000315082|RHOT2;ENST00000562598.5_1_16:718199-720176:+|nuORF;ENST00000562708.5_1_16:718199-718465:+|nuORF;ENST00000567017.5_1_16:718199-721765:+|nuORF;ENST00000568950.5_1_16:718199-721765:+|nuORF;ENST00000569675.5_1_16:718199-718652:+|nuORF	142.36107225718385	0.01012457621782354	5				NaN	NaN	0	NaN	3956	3419	7373
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7378	23.918	NaN	1385.1	30	0	195.52	0.106	+			47793	VSIEELPR	8	55	471.76637389230683	941.5181948514137	2	471.7660217285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSIEELPR_	ENST00000279488.7_1_12:89746238-89746319:-|nuORF	63.30626980617807	0.4690498839812213	5				NaN	NaN	0	NaN	3957	3419	7373
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7379	23.92	NaN	1377.4	30	0	138.68	0.106			+	18253	IPAVATKSVA	10	54	478.79173608492965	NaN	0	478.7268981933594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IPAVATKSVA_	REV__ENSG00000151475|ENST00000281154|SLC25A31;REV__ENSG00000151729|ENST00000281456|SLC25A4;REV__SLC25A31|p.P217Afs*28|1|0.42|ENSG00000151475|chr4:127768762-127768763|-/A|frameshift_variant	30.503639358989545	0.4000169810673414	5				NaN	NaN	0	NaN	3958	3419	7373
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7380	23.922	NaN	1318	30	0	147.6	0.036	+			3901	ATAQNIMNPK	10	53	544.282198724774	1086.549844516348	2	544.2825317382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATAQNIMNPK_	ENSG00000175311|ENST00000311620|ANKS4B	96.0336014099291	0.09653029772959643	5				NaN	NaN	0	NaN	3959	3419	7373
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7391	23.947	NaN	1938	30	0	287.63	0.214	+			10392	EVDPDTKEM	9	55	532.2349001974244	1062.4552474616487	2	532.2352905273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EVDPDTKEM_	ENSG00000182774|ENST00000647841|RPS17;ENST00000396783.2_1_6:29457050-29457287:-|nuORF;ENST00000423610.1_1_22:32435574-32435880:+|nuORF;ENST00000461663.1_1_5:116052154-116052343:+|nuORF;ENST00000561068.5_3_15:83205554-83208094:-|nuORF	79.71258880314673	0.09879134589249085	5				NaN	NaN	0	NaN	3967	3422	7390
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7392	23.95	NaN	3972.8	30	0	844.68	0.106	+			13187	GIAGSLTNK	9	54	430.74583546445604	859.4771179957121	2	430.7459716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GIAGSLTNK_	ENSG00000175445|ENST00000650287|LPL	104.0567914643314	0.03506238181059741	5				NaN	NaN	0	NaN	3968	3422	7390
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7393	23.952	NaN	1875.8	30	0	192.76	0.034	+			38689	SSKGPDVAY	9	50	462.2272020640932	922.4398511949864	2	462.22802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSKGPDVAY_	COL5A1|p.D1172Tfs*104|1|0.22|ENSG00000130635|chr9:134810290-134810290|G/-|frameshift_variant;COL5A1|p.E361Rfs*197|1|0.21|ENSG00000130635|chr9:134730388-134730388|G/-|frameshift_variant;COL5A1|p.G1351Efs*137|2|0.4|ENSG00000130635|chr9:134815605-134815605|C/-|frameshift_variant;COL5A1|p.G997Afs*77|1|0.22|ENSG00000130635|chr9:134801983-134801983|C/-|frameshift_variant;COL5A1|p.G997Rfs*17|1|0.4|ENSG00000130635|chr9:134801982-134801983|-/C|frameshift_variant;COL5A1|p.K933Rfs*141|1|0.32|ENSG00000130635|chr9:134795309-134795309|C/-|frameshift_variant;COL5A1|p.P1302Rfs*186|1|0.05|ENSG00000130635|chr9:134814030-134814030|C/-|frameshift_variant;COL5A1|p.P1388Lfs*100|1|0.55|ENSG00000130635|chr9:134817061-134817061|G/-|frameshift_variant;COL5A1|p.P870Qfs*204|1|0.5|ENSG00000130635|chr9:134786009-134786009|C/-|frameshift_variant;COL5A1|p.P966Lfs*108|1|0.41|ENSG00000130635|chr9:134796895-134796895|C/-|frameshift_variant;ENSG00000130635|ENST00000371817|COL5A1;ENST00000464187.1_1_9:137545303-137583524:+|nuORF;nc|ENSG00000130635|P20908-2|COL5A1	58.78195531508484	0.22376836668196862	5				NaN	NaN	0	NaN	3969	3422	7390
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7405	23.978	NaN	4608.9	30	0	1108.2	0.214	+			45220	TVNTSLVGK	9	66	459.7658859986186	917.5172190640372	2	459.7664489746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVNTSLVGK_	CCDC66|p.A265Sfs*9|1|0.15|ENSG00000180376|chr3:56567024-56567025|-/A|frameshift_variant;CCDC66|p.T207Nfs*2|2|0.31|ENSG00000180376|chr3:56566661-56566662|-/A|frameshift_variant;CCDC66|p.V732*|1|0.25|ENSG00000180376|chr3:56617454-56617454|A/-|frameshift_variant;ENSG00000180376|ENST00000394672|CCDC66;ENST00000422788.5_1_3:56595403-56599181:+|nuORF;ENST00000469966.1_1_3:56592935-56598176:+|nuORF;ENST00000472582.5_1_3:56591255-56599181:+|nuORF;nc|ENSG00000180376|A2RUB6-2|CCDC66;nc|ENSG00000180376|A2RUB6-3|CCDC66;nc|ENSG00000180376|A2RUB6-4|CCDC66	61.76455937419982	0.19890525308472518	5				NaN	NaN	0	NaN	3978	3425	7404
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7406	23.981	NaN	2228.5	30	0	748.49	0.106	+			32679	RAFASSEL	8	44	440.73010706468074	879.4456611961615	2	440.7297058105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RAFASSEL_	ENSG00000170871|ENST00000307659|KIAA0232	26.79610172149135	0.7524337208463756	5				NaN	NaN	0	NaN	3979	3425	7404
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7407	23.983	NaN	2301.5	30	0	860.86	0.106	+			8558	EAVTVVREVL	10	40	372.22032078802044	1113.6391329642613	3	372.2203063964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EAVTVVREVL_	ENSG00000136449|ENST00000323776|MYCBPAP;nc|ENSG00000136449|Q8TBZ2|MYCBPAP	29.170058357718403	0.6416167986984785	5				NaN	NaN	0	NaN	3980	3425	7404
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7408	23.985	NaN	21655	30	0	12391	0.106	+			26144	LSQFKQLAL	9	61	349.8781220750209	1046.6125368252626	3	349.8783264160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSQFKQLAL_	ENSG00000162391|ENST00000302250|FAM151A;FAM151A|p.R534Gfs*18|1|0.3|ENSG00000162391|chr1:54609426-54609426|G/-|frameshift_variant	47.657333605630114	0.33044192980041115	5				NaN	NaN	0	NaN	3981	3425	7404
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7409	23.987	NaN	1365.2	30	0	309.97	0.106				-1	DAKDTVACIL	10	51	553.2819015997494	1104.5492502662987	2	553.2830810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_DAKDTVAC(Carbamidomethyl (C))IL_	DNA2|p.L697Ffs*28|1|0.35|ENSG00000138346|chr10:68430553-68430554|-/A|frameshift_variant;ENSG00000138346|ENST00000358410|DNA2;nc|ENSG00000138346|P51530-2|DNA2;nc|ENSG00000138346|P51530-3|DNA2;nc|ENSG00000138346|P51530-4|DNA2	32.81241826257853	0.6118718159329168	5				NaN	NaN	0	NaN	3982	3425	7404
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7410	23.989	NaN	1101.5	30	0	111.34	0.035	+			9177	EGPTFLISI	9	49	488.76934814453125	NaN	0	488.76934814453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EGPTFLISI_	nc|ENSG00000211810|P04437|TRAV29DV5	40.77816245573522	0.2702456086868081	5				NaN	NaN	0	NaN	3983	3425	7404
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7423	24.016	NaN	9816.3	30	0	1112.6	0.214	+			20551	KFPSLAGK	8	70	424.25526466347543	846.4959763937509	2	424.2552795410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KFPSLAGK_	CASP8|p.C345F|1|0.39|ENSG00000064012|chr2:201285047-201285047|G/T|missense_variant	106.41520541750704	0.2471395129373963	5				NaN	NaN	0	NaN	3993	3428	7422
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7424	24.02	NaN	2420.2	30	0	747.93	0.106	+			30590	QAPSYGARPV	10	49	523.2747758068012	1044.5349986804024	2	523.2758178710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QAPSYGARPV_	ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53342924-53344195:+|nuORF	56.43379154798735	0.3982744522255666	5				NaN	NaN	0	NaN	3994	3428	7422
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7425	24.022	NaN	2476.8	30	0	208.23	0.106			+	24074	LEKDCAALA	9	58	495.7497270445311	989.4849011558622	2	495.7492980957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LEKDC(Carbamidomethyl (C))AALA_	REV__CEP350|p.W1900C|1|0.34|ENSG00000135837|chr1:180075154-180075154|G/T|missense_variant	87.75429964447693	0.0711966946989736	5				NaN	NaN	0	NaN	3995	3428	7422
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7426	24.023	NaN	2106.1	30	0	431.13	0.106	+			9150	EGNAGAVKLA	10	53	465.25646644397165	928.4983799547433	2	465.25567626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EGNAGAVKLA_	nc|ENSG00000103034|Q9ULP0-7|NDRG4	30.317721548370564	0.6322445173429027	5				NaN	NaN	0	NaN	3996	3428	7422
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7427	24.025	NaN	5935.5	30	0	1947.6	0.106			+	26106	LSNPVPAN	8	48	406.2186246236618	810.4226963141236	2	406.2190246582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSNPVPAN_	REV__ENSG00000117000|ENST00000372771|RLF;REV__RLF|p.H728Tfs*20|1|0.42|ENSG00000117000|chr1:40236880-40236880|T/-|frameshift_variant;REV__RLF|p.K1151Sfs*12|1|0.41|ENSG00000117000|chr1:40238150-40238150|A/-|frameshift_variant;REV__RLF|p.N1741Ifs*21|1|0.18|ENSG00000117000|chr1:40239919-40239919|A/-|frameshift_variant;REV__RLF|p.V1739Kfs*12|1|0.09|ENSG00000117000|chr1:40239916-40239917|TG/-|frameshift_variant;REV__RLF|p.Y1419Ifs*6|1|0.31|ENSG00000117000|chr1:40238952-40238952|T/-|frameshift_variant	42.47446043378293	0.6409579893742323	5				NaN	NaN	0	NaN	3997	3428	7422
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7428	24.027	NaN	1608.9	30	0	192.43	0.035			+	46513	VEVRPELSG	9	54	493.26919409977285	984.5238352663457	2	493.2691650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VEVRPELSG_	REV__ENSG00000171772|ENST00000343131|SYCE1;REV__nc|ENSG00000171772|Q8N0S2-2|SYCE1;REV__SYCE1|p.Q106Tfs*17|1|0.09|ENSG00000171772|chr10:133558170-133558171|-/T|frameshift_variant	37.81151784470057	0.4459294069877048	5				NaN	NaN	0	NaN	3998	3428	7422
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7429	24.028	NaN	3658.3	30	0	390.42	0.14	+			43234	TEVQKNQVL	9	65	529.7947943821239	1057.5750358310477	2	529.7910766601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TEVQKNQVL_	ENSG00000137364|ENST00000309983|TPMT;TPMT|p.F100Lfs*49|1|0.16|ENSG00000137364|chr6:18143662-18143662|A/-|frameshift_variant	85.16082228582465	0.07850854922700509	5				NaN	NaN	0	NaN	3999	3428	7422
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7442	24.057	NaN	6516	30	0	1653.1	0.214	+			5051	ATSGVAAVLAG	11	69	458.7584048399948	915.5022567467896	2	458.75836181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSGVAAVLAG_	ENSG00000122696|ENST00000242275|SLC25A51;SLC25A51|p.I257Nfs*35|1|0.06|ENSG00000122696|chr9:37887781-37887782|-/T|frameshift_variant;SLC25A51|p.I285Hfs*7|1|0.38|ENSG00000122696|chr9:37887699-37887700|-/C|frameshift_variant;SLC25A51|p.P231Sfs*3|1|0.33|ENSG00000122696|chr9:37887860-37887861|-/A|frameshift_variant	84.9155231211612	0.1195890432835285	5				NaN	NaN	0	NaN	4009	3431	7441
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7443	24.06	NaN	12240	30	0	6830.8	0.106	+			14640	GTGTIIVAK	9	61	430.2659632989797	858.5173736647595	2	430.2657775878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTGTIIVAK_	ENSG00000083857|ENST00000441802|FAT1;FAT1|p.G2934Vfs*3|2|0.37|ENSG00000083857|chr4:186617787-186617787|T/-|frameshift_variant;FAT1|p.N3847Yfs*7|1|0.03|ENSG00000083857|chr4:186601370-186601371|-/TTATA|frameshift_variant;FAT1|p.P3228Lfs*42|1|0.27|ENSG00000083857|chr4:186611556-186611556|G/-|frameshift_variant;FAT1|p.P4313Lfs*36|1|0.34|ENSG00000083857|chr4:186596602-186596602|G/-|frameshift_variant;FAT1|p.Q2933Hfs*14|1|0.33|ENSG00000083857|chr4:186617787-186617788|-/G|frameshift_variant;FAT1|p.V1878Cfs*8|2|0.22|ENSG00000083857|chr4:186620955-186620956|-/G|frameshift_variant	69.6276240434122	0.14239879520340665	5				NaN	NaN	0	NaN	4010	3431	7441
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7444	24.062	NaN	4265.6	30	0	407.05	0.106	+			26469	LTKLMVWL	8	63	502.3021458359558	NaN	0	502.3022155761719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LTKLMVWL_	ENST00000521903.5_1_8:124359502-124368686:-|nuORF	51.33545320467046	1.7418937515398478	5				NaN	NaN	0	NaN	4011	3431	7441
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7445	24.064	NaN	3194	30	0	607.09	0.106	+			30364	PVGHHDII	8	65	444.24172269898247	886.468892464765	2	444.2417907714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PVGHHDII_	ENSG00000196455|ENST00000356763|PIK3R4	39.021493756699265	0.6623843612266921	5				NaN	NaN	0	NaN	4012	3431	7441
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7446	24.066	NaN	12778	30	0	4598.7	0.106	+			4555	ATLDVAVRR	9	45	334.20137629935795	999.5822994982739	3	334.20123291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATLDVAVRR_	ENSG00000100429|ENST00000216271|HDAC10;ENST00000415993.5_1_22:50683938-50688578:-|nuORF;ENST00000454936.5_1_22:50684197-50686327:-|nuORF;ENST00000477814.5_1_22:50684197-50686750:-|nuORF;ENST00000496235.5_1_22:50685302-50686327:-|nuORF;ENST00000497036.5_1_22:50684150-50687609:-|nuORF;ENST00000497952.5_1_22:50685106-50686347:-|nuORF;HDAC10|p.G498D|1|0.4|ENSG00000100429|chr22:50246896-50246896|C/T|missense_variant;nc|ENSG00000100429|Q969S8-2|HDAC10;nc|ENSG00000100429|Q969S8-4|HDAC10	32.81241826257853	0.4965981579233955	5				NaN	NaN	0	NaN	4013	3431	7441
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7447	24.068	NaN	976.32	30	0	101.38	0.037			+	2170	ALLYINAMIV	10	42	374.2177429199219	NaN	0	374.2177429199219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ALLYINAMIV_	REV__ENSG00000167360|ENST00000300778|OR51Q1	24.519189625965996	0.41966695327750003	5				NaN	NaN	0	NaN	4014	3431	7441
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7448	24.068	NaN	3766.7	30	0	1783	0.141			+	37533	SLLRQTKH	8	31	328.19790502099625	981.5718856631888	3	328.53228759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SLLRQTKH_	REV__ENSG00000160796|ENST00000450053|NBEAL2;REV__nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2;REV__nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2	20.94693142431847	0.7975965917238792	5				NaN	NaN	0	NaN	4015	3431	7441
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7464	24.104	NaN	4860.9	30	0	500.54	0.214	+			35779	SEAEAAKNAL	10	65	502.25628886740867	1002.4980248016174	2	502.25653076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEAEAAKNAL_	ENSG00000157110|ENST00000397323|RBPMS;nc|ENSG00000157110|Q93062-2|RBPMS;nc|ENSG00000157110|Q93062-3|RBPMS;nc|ENSG00000157110|Q93062-4|RBPMS;nc|ENSG00000157110|Q93062-5|RBPMS	83.6470233535746	0.16744595502813267	5				NaN	NaN	0	NaN	4028	3434	7463
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7465	24.107	NaN	1658.7	30	0	203.49	0.106			+	12990	GEVAFACLL	9	58	461.74074718545063	921.4669414377013	2	461.74029541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEVAFACLL_	REV__ENST00000395756.5_1_17:17715494-17715812:-|nuORF	50.0245360154114	0.3026755932229825	5				NaN	NaN	0	NaN	4029	3434	7463
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7466	24.109	NaN	7979	30	0	1209.5	0.106	+			15771	GVSYAHILQAV	11	58	386.548623161763	1156.624040085489	3	386.5484619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GVSYAHILQAV_	ENSG00000183313|ENST00000332249|OR52L1;nc|ENSG00000262980|Q8NGH6|OR52L2P	20.94693142431847	0.7700749696703488	5				NaN	NaN	0	NaN	4030	3434	7463
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7467	24.111	NaN	3746.3	30	0	606.13	0.106	+			23742	LCALCVSAL	9	63	475.2454110527198	948.4762691722397	2	475.244873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_LCALC(Carbamidomethyl (C))VSAL_	ENSG00000186532|ENST00000305513|SMYD4	57.81127852772723	0.2318599694398087	5				NaN	NaN	0	NaN	4031	3434	7463
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7468	24.113	NaN	7556.1	30	0	1459.9	0.106	+			39860	STLNVGVNK	9	75	466.2638697723061	930.5131866114123	2	466.2634582519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STLNVGVNK_	AGBL5|p.R813Gfs*68|1|0.4|ENSG00000084693|chr2:27069649-27069649|C/-|frameshift_variant;ENSG00000084693|ENST00000360131|AGBL5;nc|ENSG00000084693|Q8NDL9-2|AGBL5;nc|ENSG00000084693|Q8NDL9-3|AGBL5	145.15565482312357	0.00806134135205793	5				NaN	NaN	0	NaN	4032	3434	7463
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7469	24.115	NaN	5554.1	30	0	1869.8	0.037			+	44208	TRHPTCCRGD	10	52	382.50341860082045	1144.4884264026614	3	382.50360107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TRHPTCCRGD_	REV__ENSG00000118523|ENST00000367976|CCN2;REV__nc|ENSG00000118523|P29279-2|CCN2	30.317721548370564	0.6322445173429027	5				NaN	NaN	0	NaN	4033	3434	7463
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7470	24.115	NaN	2782.9	30	0	391.21	0.142				-1	YSVHMDYSK	9	60	573.2522764027752	1144.4899998723504	2	573.25244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_YSVHM(Oxidation (M))DYSK_	ENST00000448842.1_1_2:204536900-204537104:-|nuORF	30.503639358989545	0.5181749237905803	5				NaN	NaN	0	NaN	4034	3434	7463
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7485	24.149	NaN	40243	30	0	8690.9	0.214	+			14728	GTISAITSK	9	71	439.2531491765023	876.4917454198046	2	439.2529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTISAITSK_	ENSG00000145113|ENST00000463781|MUC4;MUC4|p.L3985Ffs*274|1|0.3|ENSG00000145113|chr3:195779627-195779627|G/-|frameshift_variant;MUC4|p.N4902Tfs*8|1|0.37|ENSG00000145113|chr3:195761027-195761027|T/-|frameshift_variant;nc|ENSG00000145113|Q99102-10|MUC4;nc|ENSG00000145113|Q99102-11|MUC4;nc|ENSG00000145113|Q99102-15|MUC4;nc|ENSG00000145113|Q99102-16|MUC4;nc|ENSG00000145113|Q99102-17|MUC4;nc|ENSG00000145113|Q99102-2|MUC4;nc|ENSG00000145113|Q99102-3|MUC4;nc|ENSG00000145113|Q99102-5|MUC4;nc|ENSG00000145113|Q99102-7|MUC4;nc|ENSG00000145113|Q99102-8|MUC4;nc|ENSG00000145113|Q99102-9|MUC4	204.624747049445	1.3753862112523631E-05	5				NaN	NaN	0	NaN	4046	3437	7484
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7486	24.152	NaN	2930.9	30	0	544.15	0.106	+			38249	SQNDGSFISK	10	71	541.7594787673422	NaN	0	541.7595825195312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SQNDGSFISK_	ENSG00000110400|ENST00000264025|NECTIN1	95.4829727501206	0.03312940011185553	5				NaN	NaN	0	NaN	4047	3437	7484
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7487	24.154	NaN	7475	30	0	4918.1	0.106	+			30853	QEGKHVIGL	9	54	490.7797095100256	979.5448660868512	2	490.7796630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QEGKHVIGL_	ENSG00000149591|ENST00000392951|TAGLN	57.81127852772723	0.2318599694398087	5				NaN	NaN	0	NaN	4048	3437	7484
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7488	24.156	NaN	6037.8	30	0	775.26	0.106	+			38206	SQFSGKITVK	10	70	547.8140169364959	1093.6134809397918	2	547.8143310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SQFSGKITVK_	ENSG00000075568|ENST00000186436|TMEM131;TMEM131|p.G555Wfs*10|1|0.32|ENSG00000075568|chr2:97812704-97812705|-/A|frameshift_variant;TMEM131|p.L1469Tfs*5|1|0.43|ENSG00000075568|chr2:97772340-97772341|-/T|frameshift_variant;TMEM131|p.L538Ffs*27|1|0.09|ENSG00000075568|chr2:97813974-97813975|-/A|frameshift_variant;TMEM131|p.N815Ifs*2|1|0.27|ENSG00000075568|chr2:97802749-97802749|T/-|frameshift_variant;TMEM131|p.N815Kfs*9|1|0.31|ENSG00000075568|chr2:97802748-97802749|-/T|frameshift_variant	108.31271852315183	0.05301033373712667	5				NaN	NaN	0	NaN	4049	3437	7484
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7489	24.158	NaN	3911.8	30	0	683.45	0.106	+			37667	SLRFGGQRYI	10	40	399.55695306386434	NaN	0	399.5570068359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SLRFGGQRYI_	ENSG00000134007|ENST00000256389|ADAM20	33.921630207806714	0.38879399011744475	5				NaN	NaN	0	NaN	4050	3437	7484
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7490	24.16	NaN	1857.1	30	0	285.03	0.034	+			42947	TEISSAEKV	9	60	482.2530761641935	NaN	0	482.2530212402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TEISSAEKV_	ENSG00000047849|ENST00000683076|MAP4;MAP4|p.R919Gfs*14|1|0.44|ENSG00000047849|chr3:47870917-47870917|G/-|frameshift_variant;MAP4|p.T960Qfs*35|1|0.3|ENSG00000047849|chr3:47869309-47869309|T/-|frameshift_variant;MAP4|p.V999*|1|0.25|ENSG00000047849|chr3:47867318-47867318|T/-|frameshift_variant;nc|ENSG00000047849|P27816-2|MAP4;nc|ENSG00000047849|P27816-6|MAP4;nc|ENSG00000047849|P27816|MAP4	63.53385203322761	0.134247007536971	5				NaN	NaN	0	NaN	4051	3437	7484
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7491	24.16	NaN	1790	30	0	612.04	0.139	+			15062	GTPAGGGFPR	10	47	458.7351261185908	915.4556993039816	2	458.735595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GTPAGGGFPR_	ENSG00000185650|ENST00000439696|ZFP36L1;ENST00000555997.1_1_14:69256252-69257717:-|nuORF;ZFP36L1|p.G271Vfs*36|1|0.32|ENSG00000185650|chr14:68789738-68789738|C/-|frameshift_variant;ZFP36L1|p.H177Tfs*56|1|0.79|ENSG00000185650|chr14:68790021-68790021|G/-|frameshift_variant;ZFP36L1|p.P274Rfs*33|1|0.26|ENSG00000185650|chr14:68789729-68789729|G/-|frameshift_variant;ZFP36L1|p.S294Afs*13|1|0.33|ENSG00000185650|chr14:68789671-68789671|G/-|frameshift_variant	45.97224482568171	0.49411383603842696	5				NaN	NaN	0	NaN	4052	3437	7484
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7509	24.2	NaN	4993.9	30	0	640.26	0.214	+			23259	KYISKPENL	9	66	546.3086282968987	1090.6027036605974	2	546.3090209960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KYISKPENL_	ENSG00000102547|ENST00000409308|CAB39L;ENSG00000135932|ENST00000258418|CAB39;ENST00000493540.1_1_2:231678823-231682621:+|nuORF	96.0336014099291	0.047854655524928534	5				NaN	NaN	0	NaN	4067	3440	7508
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7510	24.203	NaN	2355.7	30	0	159.08	0.106	+			11013	FEKDVKGESL	10	66	576.3014019551973	1150.5882509771945	2	576.3012084960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FEKDVKGESL_	ENSG00000119888|ENST00000263735|EPCAM	61.76455937419982	0.3497917639301274	5				NaN	NaN	0	NaN	4068	3440	7508
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7511	24.205	NaN	2134	30	0	191.05	0.106	+			11973	FVNDDRHVM	9	60	566.7634553422439	1131.5123577512877	2	566.7639770507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FVNDDRHVM_	ENSG00000129351|ENST00000588657|ILF3;ENST00000587928.5_1_19:10781281-10792148:+|nuORF;nc|ENSG00000129351|Q12906-2|ILF3;nc|ENSG00000129351|Q12906-3|ILF3;nc|ENSG00000129351|Q12906-4|ILF3;nc|ENSG00000129351|Q12906-5|ILF3;nc|ENSG00000129351|Q12906-6|ILF3;nc|ENSG00000129351|Q12906|ILF3	77.31757898189308	0.1091473830098891	5				NaN	NaN	0	NaN	4069	3440	7508
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7512	24.207	NaN	3344.2	30	0	537.38	0.106	+			13815	GQNPTNAEVLK	11	65	585.8092422626108	1169.6039315920216	2	585.8092041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GQNPTNAEVLK_	ENSG00000092841|ENST00000550697|MYL6;ENSG00000196465|ENST00000695999|MYL6B;ENST00000405661.8_1_12:56547702-56549525:+|nuORF;ENST00000546630.1_1_12:56552185-56553570:+|nuORF;ENST00000547703.5_1_12:56552185-56553570:+|nuORF;ENST00000548725.5_1_12:56552185-56553955:+|nuORF;ENST00000549178.5_1_12:56548807-56551507:+|nuORF;ENST00000550152.5_1_12:56547702-56549709:+|nuORF;nc|ENSG00000092841|P60660-2|MYL6	63.42647028704847	0.292869158926425	5				NaN	NaN	0	NaN	4070	3440	7508
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7513	24.209	NaN	2906.8	30	0	673.54	0.106			+	-1	SNCMILVL	8	60	475.2454110527198	948.4762691722397	2	475.2452392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_SNC(Carbamidomethyl (C))MILVL_	REV__ENSG00000124089|ENST00000243911|MC3R	40.5726180659479	0.6527593143185008	5				NaN	NaN	0	NaN	4071	3440	7508
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7514	24.211	NaN	1737	30	0	151.44	0.035	+			25892	LSGDRVRLD	9	60	515.7861694485865	NaN	0	515.7861938476562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSGDRVRLD_	CON__Q32MB2;CON__Q3SY84;CON__Q6IME9;CON__Q6NXH9;CON__Q7RTS7;CON__Q9R0H5;ENSG00000139648|ENST00000267119|KRT71;ENSG00000170484|ENST00000305620|KRT74;ENSG00000186049|ENST00000305748|KRT73;KRT71|p.T194M|1|0.31|ENSG00000139648|chr12:52550104-52550104|G/A|missense_variant;KRT73|p.T196M|1|0.17|ENSG00000186049|chr12:52616241-52616241|G/A|missense_variant;nc|ENSG00000186049|Q86Y46-2|KRT73	32.75053402867276	0.3122164853807509	5				NaN	NaN	0	NaN	4072	3440	7508
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7515	24.211	NaN	1685	30	0	161.06	0.14			+	35957	SEGPPRPSGAP	11	56	526.261780889804	1050.5090088464078	2	527.2554931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SEGPPRPSGAP_	REV__ENST00000381401.10_1_X:1511360-1511447:-|nuORF	29.170058357718403	0.683821074385409	5				NaN	NaN	0	NaN	4073	3440	7508
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7530	24.244	NaN	10255	30	0	1849.5	0.214	+			40923	SVFQTTDTK	9	66	513.758689739277	1025.5028265453539	2	513.7586669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVFQTTDTK_	ENSG00000153130|ENST00000608372|SCOC;nc|ENSG00000153130|Q9UIL1-2|SCOC;nc|ENSG00000153130|Q9UIL1-3|SCOC;nc|ENSG00000153130|Q9UIL1-4|SCOC;nc|ENSG00000153130|Q9UIL1|SCOC	128.60217544463768	0.015992218256422188	5				NaN	NaN	0	NaN	4085	3443	7529
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7531	24.248	NaN	10837	30	0	2776.2	0.106	+			28203	NASRDQVVY	9	60	526.261780889804	1050.5090088464078	2	526.2625732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NASRDQVVY_	ENSG00000167608|ENST00000619895|TMC4;nc|ENSG00000167608|Q7Z404-1|TMC4;nc|ENSG00000167608|Q7Z404|TMC4;TMC4|p.F240Lfs*221|1|0.42|ENSG00000167608|chr19:54168267-54168268|AA/-|frameshift_variant;TMC4|p.Q383Rfs*6|1|0.37|ENSG00000167608|chr19:54163872-54163872|G/-|frameshift_variant	56.43379154798735	0.2433427591689151	5				NaN	NaN	0	NaN	4086	3443	7529
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7532	24.25	NaN	2376.5	30	0	707.19	0.106	+			49108	VVLGSGGVGK	10	49	436.7637900415717	871.5130271499435	2	436.7633361816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVLGSGGVGK_	ENSG00000116473|ENST00000369709|RAP1A;ENSG00000123728|ENST00000370874|RAP2C;ENSG00000125249|ENST00000245304|RAP2A;ENSG00000127314|ENST00000250559|RAP1B;ENSG00000181467|ENST00000323534|RAP2B;ENST00000460800.5_1_12:69042504-69044290:+|nuORF;ENST00000494982.1_1_1:112233982-112249293:+|nuORF;ENST00000501412.2_1_12:69042504-69042582:+|nuORF;ENST00000535492.5_2_12:69042504-69047907:+|nuORF;nc|ENSG00000127314|P61224-2|RAP1B;nc|ENSG00000127314|P61224-3|RAP1B;nc|ENSG00000127314|P61224-4|RAP1B;RAP2B|p.F39Lfs*6|1|0.34|ENSG00000181467|chr3:153162808-153162809|TT/-|frameshift_variant	60.11826168202944	0.36476464221954025	5				NaN	NaN	0	NaN	4087	3443	7529
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7533	24.252	NaN	1733.6	30	0	183.48	0.106			+	2838	ASAICFIAI	9	49	454.74877890982117	907.4830048864424	2	454.7491760253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASAICFIAI_	REV__ENSG00000138600|ENST00000261854|SPPL2A;REV__ENST00000559527.1_1_15:51023229-51039693:-|nuORF	60.29395666154354	0.21116425950210296	5				NaN	NaN	0	NaN	4088	3443	7529
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7534	24.254	NaN	1598.6	30	0	258.01	0.106			+	12163	GALAPATGPLQ	11	54	498.27926407759895	NaN	0	498.2790832519531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GALAPATGPLQ_	REV__ENST00000448759.1_1_1:43352460-43353038:-|nuORF	52.936696900407355	0.2942262773185686	5				NaN	NaN	0	NaN	4089	3443	7529
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7535	24.255	NaN	3032.2	30	0	396.88	0.106	+			45152	TVLRPSLGK	9	62	485.8057097345168	969.5968665358337	2	485.80584716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TVLRPSLGK_	ENSG00000214102|ENST00000397541|WEE2;WEE2|p.K506*|1|0.1|ENSG00000214102|chr7:141727426-141727427|-/TG|frameshift_variant	77.31757898189308	0.1091473830098891	5				NaN	NaN	0	NaN	4090	3443	7529
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7536	24.257	NaN	5329.4	30	0	1327.7	0.035			+	38303	SRAEYEADV	9	66	520.2379382011485	1038.461323469097	2	520.7403564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SRAEYEADV_	REV__ENSG00000149182|ENST00000524782|ARFGAP2;REV__nc|ENSG00000149182|Q8N6H7-2|ARFGAP2;REV__nc|ENSG00000149182|Q8N6H7-3|ARFGAP2	45.97224482568171	0.3502073465782774	5				NaN	NaN	0	NaN	4091	3443	7529
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7549	24.284	NaN	9489.7	30	0	998.75	0.214			+	45124	TVKERLGK	8	69	465.7899897921249	NaN	0	465.7899169921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVKERLGK_	REV__ENSG00000133454|ENST00000335473|MYO18B;REV__nc|ENSG00000133454|Q8IUG5-2|MYO18B;REV__nc|ENSG00000133454|Q8IUG5-3|MYO18B	52.936696900407355	1.7418937515398478	5				NaN	NaN	0	NaN	4101	3446	7548
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7550	24.288	NaN	3691.5	30	0	543.19	0.106	+			42232	TAALAHTSY	9	67	467.73534662361885	933.4561403140377	2	467.7349853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAALAHTSY_	ENSG00000205277|ENST00000536621|MUC12;nc|ENSG00000205277|Q9UKN1|MUC12	120.62098272573253	0.020823834273767324	5				NaN	NaN	0	NaN	4102	3446	7548
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7551	24.29	NaN	4370.7	30	0	620.25	0.106	+			51359	YTAPPLQSK	9	66	502.7742012074951	1003.5338494817902	2	502.7742004394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YTAPPLQSK_	ENSG00000155008|ENST00000373173|APOOL	75.65223720490533	0.11634833104049533	5				NaN	NaN	0	NaN	4103	3446	7548
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7552	24.291	NaN	3360	30	0	734.06	0.106	+			30351	PTWARGTPL	9	55	499.7762731880337	997.5379934428674	2	499.7764587402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PTWARGTPL_	ENSG00000149503|ENST00000394818|INCENP;nc|ENSG00000149503|Q9NQS7-2|INCENP	40.77816245573522	0.41113185337114944	5				NaN	NaN	0	NaN	4104	3446	7548
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7553	24.293	NaN	917.37	30	0	283.55	0.106			+	47057	VLGGAIVG	8	31	343.21580259042554	NaN	0	343.2156677246094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VLGGAIVG_	REV__ENSG00000115884|ENST00000254351|SDC1	24.504012794735996	1.7418937515398478	5				NaN	NaN	0	NaN	4105	3446	7548
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7554	24.295	NaN	2247.6	30	0	272.31	0.106	+			46131	VDLKGPKV	8	51	428.2685826065645	854.522612279929	2	428.26837158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VDLKGPKV_	AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK;ENSG00000124942|ENST00000378024|AHNAK	40.77816245573522	0.6514838689002179	5				NaN	NaN	0	NaN	4106	3446	7548
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7555	24.297	NaN	2938.8	30	0	680.94	0.04	+			46976	VKLCRECLEKQ	11	55	450.2390110170222	1347.6952036512666	3	450.2384033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VKLCRECLEKQ_	ENSG00000115593|ENST00000419482|SMYD1	27.553686687779056	0.7007754949956778	5				NaN	NaN	0	NaN	4107	3446	7548
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7566	24.322	NaN	4804.5	30	0	1217.2	0.214	+			41966	SVWHGTLSK	9	65	507.77228920415456	1013.5300254751091	2	507.7724304199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVWHGTLSK_	ENSG00000136270|ENST00000258770|TBRG4;nc|ENSG00000136270|Q969Z0-2|TBRG4;TBRG4|p.L492Cfs*9|2|0.32|ENSG00000136270|chr7:45101918-45101918|G/-|frameshift_variant	93.1432384553994	0.056003526918089595	5				NaN	NaN	0	NaN	4115	3449	7565
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7567	24.326	NaN	12688	30	0	1555.4	0.106	+			3599	ASVNTLVNK	9	73	473.2718557706217	944.5291586080434	2	473.2715148925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASVNTLVNK_	ARFIP1|p.K303Nfs*13|1|0.22|ENSG00000164144|chr4:152888246-152888246|A/-|frameshift_variant;ENSG00000164144|ENST00000353617|ARFIP1;nc|ENSG00000164144|P53367-2|ARFIP1;nc|ENSG00000164144|P53367-3|ARFIP1	159.27591364854348	0.004707062175358555	5				NaN	NaN	0	NaN	4116	3449	7565
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7568	24.328	NaN	5154.8	30	0	651.29	0.106				-1	 	0	53	398.77386743785155	795.5331819425031	2	398.77386474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4117	3449	7565
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7569	24.33	NaN	3459	30	0	769.82	0.106	+			8079	DVREEGKENAF	11	64	647.3069620111727	1292.5993710891453	2	647.3072509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DVREEGKENAF_	ENSG00000109111|ENST00000314616|SUPT6H;nc|ENSG00000109111|Q7KZ85-2|SUPT6H	69.2159832094219	0.24227581199444026	5				NaN	NaN	0	NaN	4118	3449	7565
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7570	24.331	NaN	2479.8	30	0	306.46	0.106	+			16194	HEAQIQEM	8	48	493.22379659942635	NaN	0	493.2237548828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HEAQIQEM_	ENSG00000100345|ENST00000216181|MYH9;SYNDIG1-MYH9|1|fusion	62.107414245175825	1.7418937515398478	5				NaN	NaN	0	NaN	4119	3449	7565
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7571	24.333	NaN	1699.9	30	0	270.27	0.035	+			11006	FEHKEEVL	8	50	515.7639310797741	1029.5133092263482	2	515.7640991210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FEHKEEVL_	ENSG00000130119|ENST00000360845|GNL3L;ENST00000489691.1_1_X:54558969-54570464:+|nuORF	49.44154591367651	0.597725784090933	5				NaN	NaN	0	NaN	4120	3449	7565
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7572	24.334	NaN	5955	30	0	1112.8	0.144				-1	LIMQTSESGI	10	39	365.517564517605	1093.530864153015	3	365.5173645019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_LIM(Oxidation (M))QTSESGI_	BRD8|p.P1065Lfs*29|1|0.14|ENSG00000112983|chr5:138149724-138149724|G/-|frameshift_variant;ENSG00000112983|ENST00000254900|BRD8;nc|ENSG00000112983|Q9H0E9-2|BRD8;nc|ENSG00000112983|Q9H0E9-3|BRD8;nc|ENSG00000112983|Q9H0E9-4|BRD8	30.317721548370564	0.6322445173429027	5				NaN	NaN	0	NaN	4121	3449	7565
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7586	24.366	NaN	51725	30	0	10547	0.214	+			45173	TVMDKTRAL	9	93	517.7864930722485	1033.558433211297	2	517.7871704101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVMDKTRAL_	CARD17-CASP1|1|fusion;CARD17-CASP1|2|fusion;CASP1|p.N205Ifs*7|1|0.4|ENSG00000137752|chr11:105030343-105030343|T/-|frameshift_variant;ENSG00000137752|ENST00000533400|CASP1;ENSG00000204397|ENST00000673097|CARD16;ENST00000526511.5_1_11:104901858-104905840:-|nuORF;ENST00000527065.1_1_11:104915107-104915377:-|nuORF;nc|ENSG00000137752|P29466-2|CASP1;nc|ENSG00000204397|Q5EG05|CARD16	114.8945686534367	0.024290463251177924	5				NaN	NaN	0	NaN	4132	3452	7585
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7587	24.369	NaN	7764.5	30	0	1609.2	0.106	+			14880	GTLPHPLQR	9	70	509.7933732588645	1017.572193584529	2	509.7935791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTLPHPLQR_	ENSG00000111319|ENST00000228916|SCNN1A;ENST00000540037.5_2_12:6464995-6472854:-|nuORF;nc|ENSG00000111319|P37088-2|SCNN1A;nc|ENSG00000111319|P37088-3|SCNN1A;nc|ENSG00000111319|P37088-4|SCNN1A;nc|ENSG00000111319|P37088-5|SCNN1A;nc|ENSG00000111319|P37088-6|SCNN1A	56.72105179125745	0.24094814563026265	5				NaN	NaN	0	NaN	4133	3452	7585
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7588	24.371	NaN	3361.5	30	0	493.62	0.106			+	45420	TVVTVSKQQ	9	63	495.2846813878757	988.5548098425514	2	495.2847900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVVTVSKQQ_	REV__ENSG00000176641|ENST00000312828|RNF152	45.97224482568171	0.3502073465782774	5				NaN	NaN	0	NaN	4134	3452	7585
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7589	24.373	NaN	2616.9	30	0	175.85	0.106	+			42631	TAVEAGRAL	9	58	444.25026993004553	886.4859869268911	2	444.2500305175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TAVEAGRAL_	ENSG00000032444|ENST00000600737|PNPLA6;nc|ENSG00000032444|Q8IY17-2|PNPLA6;nc|ENSG00000032444|Q8IY17-3|PNPLA6;nc|ENSG00000032444|Q8IY17-5|PNPLA6;nc|ENSG00000032444|Q8IY17|PNPLA6;PNPLA6|p.S1175Pfs*10|1|0.55|ENSG00000032444|chr19:7558944-7558944|G/-|frameshift_variant	63.53385203322761	0.18415635464017938	5				NaN	NaN	0	NaN	4135	3452	7585
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7590	24.375	NaN	2376.9	30	0	947.33	0.106	+			30497	QAFESSQKY	9	58	544.2564343529015	1086.4983157726028	2	544.2571411132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QAFESSQKY_	ENSG00000090238|ENST00000398841|YPEL3;ENST00000565479.5_1_16:30104033-30107516:-|nuORF;nc|ENSG00000090238|P61236|YPEL3	93.1432384553994	0.056003526918089595	5				NaN	NaN	0	NaN	4136	3452	7585
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7591	24.377	NaN	2016.9	30	0	462.85	0.033			+	11876	FTGTLGIGA	9	43	418.72935980658065	835.4441666799613	2	418.7292785644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FTGTLGIGA_	REV__ENST00000511359.1_1_5:23303923-23304922:-|nuORF	24.20275056022122	0.577060078256802	5				NaN	NaN	0	NaN	4137	3452	7585
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7592	24.377	NaN	1041	30	0	132.01	0.142	+			16456	HETDFNGQKL	10	49	594.786342480422	NaN	0	594.7864990234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HETDFNGQKL_	ENSG00000117602|ENST00000374395|RCAN3;nc|ENSG00000117602|Q9UKA8-2|RCAN3;nc|ENSG00000117602|Q9UKA8-3|RCAN3	59.93077597824379	0.23484348948204886	5				NaN	NaN	0	NaN	4138	3452	7585
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7607	24.411	NaN	5796.3	30	0	1218.2	0.214	+			4570	ATLEETLVKKK	11	55	420.59035545194433	1258.749236956033	3	420.59051513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATLEETLVKKK_	ENSG00000254093|ENST00000314787|PINX1	52.167168403610894	0.39337392184041037	5				NaN	NaN	0	NaN	4150	3455	7606
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7608	24.414	NaN	3469.1	30	0	507.94	0.106	+			2941	ASDPHIIIK	9	63	497.29008622637514	992.5656195195503	2	497.2900695800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASDPHIIIK_	ENSG00000134313|ENST00000256707|KIDINS220;ENST00000488729.5_1_2:8870852-8965899:-|nuORF;KIDINS220|p.K1581Rfs*8|1|0.28|ENSG00000134313|chr2:8731294-8731294|T/-|frameshift_variant;KIDINS220|p.P1081Rfs*48|1|0.22|ENSG00000134313|chr2:8750284-8750284|G/-|frameshift_variant;KIDINS220|p.R1551Efs*38|1|0.08|ENSG00000134313|chr2:8731386-8731386|C/-|frameshift_variant;nc|ENSG00000134313|Q9ULH0-2|KIDINS220;nc|ENSG00000134313|Q9ULH0-3|KIDINS220;nc|ENSG00000134313|Q9ULH0-4|KIDINS220	71.87747018426188	0.13267044672804276	5				NaN	NaN	0	NaN	4151	3455	7606
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7609	24.416	NaN	1132.5	30	0	481.7	0.106	+			9204	EGRLVYRYGGE	11	40	433.55407781104714	1297.6404040333414	3	433.5541687011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EGRLVYRYGGE_	AGL|p.K1407Nfs*8|1|0.39|ENSG00000162688|chr1:99915441-99915441|A/-|frameshift_variant;AGL|p.N1304Ifs*10|1|0.38|ENSG00000162688|chr1:99912472-99912472|A/-|frameshift_variant;AGL|p.N1304Kfs*7|1|0.38|ENSG00000162688|chr1:99912471-99912472|-/A|frameshift_variant;ENSG00000162688|ENST00000361915|AGL;nc|ENSG00000162688|P35573-2|AGL;nc|ENSG00000162688|P35573-3|AGL	19.262678746197807	0.7802940895261122	5				NaN	NaN	0	NaN	4152	3455	7606
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7610	24.418	NaN	1239.5	30	0	204.34	0.106	+			17591	IEENMNIAI	9	50	523.762939453125	NaN	0	523.762939453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IEENMNIAI_	ENSG00000170967|ENST00000302259|DDI1	35.61828744233558	0.29773779453147337	5				NaN	NaN	0	NaN	4153	3455	7606
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7611	24.42	NaN	1330	30	0	90.394	0.034	+			10162	ESVLEVVR	8	58	465.7659445189506	NaN	0	465.7657165527344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ESVLEVVR_	SYMPK|p.A678V|1|0.32|ENSG00000125755|chr19:45827871-45827871|G/A|missense_variant	47.91560031466742	1.7418937515398478	5				NaN	NaN	0	NaN	4154	3455	7606
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7625	24.449	NaN	1119.5	30	0	759.99	0.214	+			124	AAGAAGIL	8	22	322.19362373752887	642.3726945418578	2	322.1935729980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAGAAGIL_	ENSG00000131470|ENST00000393795|PSMC3IP;nc|ENSG00000131470|Q9P2W1-2|PSMC3IP;PSMC3IP|p.Q167Gfs*39|1|0.27|ENSG00000131470|chr17:42573350-42573351|-/CT|frameshift_variant	10.184766708764876	0.7843118145031319	5				NaN	NaN	0	NaN	4165	3458	7624
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7626	24.453	NaN	1958.3	30	0	336.94	0.106			+	27443	MLILAQDR	8	53	480.2691204492104	NaN	0	480.2686767578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MLILAQDR_	REV__ENSG00000152818|ENST00000367545|UTRN;REV__nc|ENSG00000152818|P46939-2|UTRN;REV__UTRN|p.G3160*|1|0.03|ENSG00000152818|chr6:144821001-144821002|AG/-|frameshift_variant;REV__UTRN|p.K1847Ffs*66|1|0.07|ENSG00000152818|chr6:144516945-144516946|-/TTTAA|frameshift_variant;REV__UTRN|p.R3003Pfs*5|1|0.27|ENSG00000152818|chr6:144793915-144793916|-/C|frameshift_variant;REV__UTRN|p.T2422Hfs*35|1|0.47|ENSG00000152818|chr6:144557282-144557282|A/-|frameshift_variant	71.29570347882199	1.7418937515398478	5				NaN	NaN	0	NaN	4166	3458	7624
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7627	24.455	NaN	1907.8	30	0	165.61	0.106			+	-1	SPCSSLPAWP	10	53	551.256358443755	1100.4981639543098	2	551.7576904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SPC(Carbamidomethyl (C))SSLPAWP_	REV__ENSG00000108342|ENST00000394149|CSF3;REV__nc|ENSG00000108342|P09919|CSF3	27.882242232435846	0.6521336255503853	5				NaN	NaN	0	NaN	4167	3458	7624
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7628	24.457	NaN	1592.1	30	0	218.92	0.106	+			12622	GEIDKRVEV	9	50	522.7884244686301	NaN	0	522.7879638671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEIDKRVEV_	ENSG00000113742|ENST00000265085|CPEB4;nc|ENSG00000113742|Q17RY0-2|CPEB4;nc|ENSG00000113742|Q17RY0-3|CPEB4	47.95952297671804	0.22075498469600283	5				NaN	NaN	0	NaN	4168	3458	7624
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7629	24.458	NaN	2838.5	30	0	886.54	0.106	+			8206	EADKTIKVY	9	58	533.7936142031491	NaN	0	533.7931518554688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EADKTIKVY_	ENSG00000171566|ENST00000499023|PLRG1;nc|ENSG00000171566|O43660-2|PLRG1	79.71258880314673	0.07236858429579222	5				NaN	NaN	0	NaN	4169	3458	7624
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7630	24.46	NaN	1361.5	30	0	428.57	0.037			+	8951	EFAKDLFRK	9	56	577.320109929184	1152.625666925168	2	577.321044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EFAKDLFRK_	REV__ENST00000518968.1_1_8:50652851-50653445:-|nuORF	34.172542307311794	0.4838870758800184	5				NaN	NaN	0	NaN	4170	3458	7624
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7644	24.49	NaN	5218.7	30	0	1068.5	0.214	+			45096	TVIHFNNPK	9	67	535.2931078182421	1068.5716627032841	2	535.2943115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVIHFNNPK_	ENSG00000134717|ENST00000313334|BTF3L4;ENSG00000145741|ENST00000380591|BTF3;ENST00000418879.1_1_6:137865036-137865375:-|nuORF;nc|ENSG00000134717|Q96K17-2|BTF3L4;nc|ENSG00000145741|P20290-2|BTF3	79.48907831485694	0.09975780661107167	5				NaN	NaN	0	NaN	4181	3461	7643
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7645	24.494	NaN	1707.2	30	0	934.53	0.106				-1	IFFMVIAFC	9	49	574.2858650367125	1146.557177140225	2	574.286865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_IFFMVIAFC(Carbamidomethyl (C))_	ENSG00000196639|ENST00000431010|HRH1	29.841539824830324	0.5243625958137083	5				NaN	NaN	0	NaN	4182	3461	7643
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7646	24.496	NaN	1279.6	30	0	153.35	0.106			+	-1	VDMFAVLM	8	47	471.22527841779817	NaN	0	471.2258605957031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_VDMFAVLM(Oxidation (M))_	REV__ENST00000311180.8_1_3:57545534-57545582:+|nuORF	39.021493756699265	1.7418937515398478	5				NaN	NaN	0	NaN	4183	3461	7643
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7647	24.497	NaN	551.71	30	0	36.578	0.106			+	-1	QMRCLLRVI	9	42	594.8369750976562	NaN	0	594.8369750976562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_QMRC(Carbamidomethyl (C))LLRVI_	REV__ENST00000371989.7_1_9:136229248-136229398:-|nuORF	23.04248740728303	0.3589936788096251	5				NaN	NaN	0	NaN	4184	3461	7643
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7648	24.499	NaN	938.99	30	0	140.94	0.033			+	27086	MALPRQGA	8	41	422.2286254092492	842.4426978852985	2	422.2287902832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MALPRQGA_	REV__ENST00000447014.5_2_2:111434178-111435602:-|nuORF;REV__ENST00000465029.5_1_2:111419157-111435602:-|nuORF	37.028477286268924	0.6747514403204248	5				NaN	NaN	0	NaN	4185	3461	7643
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7661	24.526	NaN	12884	30	0	1284.1	0.214	+			43927	TPAGVVNKY	9	84	474.7612245456225	947.507896158045	2	474.7613525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TPAGVVNKY_	ENSG00000172893|ENST00000355527|DHCR7	153.03582135801034	0.006161527642367307	5				NaN	NaN	0	NaN	4195	3464	7660
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7662	24.53	NaN	2377.4	30	0	253.28	0.106	+			7201	DAIDRYLK	8	62	497.2717364209616	NaN	0	497.27191162109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DAIDRYLK_	tr|U7SMB6|U7SMB6_FUSNUdTDP-4-dehydrorhamnosereductaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01944PE=3SV=1	54.776311868738084	1.7418937515398478	5				NaN	NaN	0	NaN	4196	3464	7660
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7663	24.532	NaN	2526.7	30	0	309.16	0.106	+			47326	VPAEHQVAM	9	58	491.24500357178573	980.4754542103715	2	491.2456970214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VPAEHQVAM_	ENSG00000196943|ENST00000267425|NOP9;nc|ENSG00000196943|Q86U38-2|NOP9	41.42661286455405	0.403525789677298	5				NaN	NaN	0	NaN	4197	3464	7660
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7664	24.534	NaN	5996.3	30	0	748.03	0.106			+	11902	FTVPMPSI	8	67	454.2325385619955	906.450524190791	2	454.23431396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_FTVPM(Oxidation (M))PSI_	REV__ENST00000530973.1_1_11:65111264-65113280:+|nuORF	68.484700416344	0.4195245774506064	5				NaN	NaN	0	NaN	4198	3464	7660
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7665	24.536	NaN	2565.2	30	0	347.93	0.106	+			22866	KVKTPSFGIS	10	64	532.3111761000728	1062.6077992669454	2	532.3120727539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KVKTPSFGIS_	AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK	54.776311868738084	0.41334902933431344	5				NaN	NaN	0	NaN	4199	3464	7660
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7666	24.537	NaN	2293.6	30	0	262.7	0.106	+			12429	GEARVGSEL	9	57	459.2378024757522	NaN	0	459.238525390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GEARVGSEL_	ENSG00000077235|ENST00000356183|GTF3C1;GTF3C1|p.P1914Qfs*30|1|0.16|ENSG00000077235|chr16:27464451-27464451|G/-|frameshift_variant;GTF3C1|p.V2028Sfs*25|1|0.14|ENSG00000077235|chr16:27462329-27462329|C/-|frameshift_variant;nc|ENSG00000077235|Q12789-3|GTF3C1	54.722347961057174	0.17414871455573902	5				NaN	NaN	0	NaN	4200	3464	7660
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7667	24.539	NaN	1993.6	30	0	193.93	0.036			+	12809	GEMLELIIY	9	61	540.7847343672248	1079.5549158012495	2	540.7838134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GEMLELIIY_	REV__ENSG00000047936|ENST00000368507|ROS1;REV__nc|ENSG00000047936|P08922|ROS1	56.72105179125745	0.24094814563026265	5				NaN	NaN	0	NaN	4201	3464	7660
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7683	24.573	NaN	20800	30	0	8515.1	0.214	+			49638	VYIEKNDKL	9	66	374.54489750864724	1120.6128631261417	3	374.54473876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYIEKNDKL_	ENSG00000065361|ENST00000267101|ERBB3;ENST00000546884.1_1_12:56474084-56480451:+|nuORF;ENST00000549472.1_1_12:56480319-56481575:+|nuORF;ERBB3|p.A805Gfs*22|1|0.1|ENSG00000065361|chr12:56097177-56097178|-/G|frameshift_variant;ERBB3|p.A805Hfs*95|1|0.33|ENSG00000065361|chr12:56097178-56097178|G/-|frameshift_variant;ERBB3|p.R1080Vfs*22|1|0.14|ENSG00000065361|chr12:56101093-56101093|C/-|frameshift_variant;nc|ENSG00000065361|P21860-3|ERBB3;nc|ENSG00000065361|P21860-4|ERBB3	76.7741389293348	0.11149722112137898	5				NaN	NaN	0	NaN	4214	3467	7682
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7684	24.576	NaN	2929.3	30	0	775.79	0.106			+	41738	SVSIALAYGG	10	45	469.2530435740083	936.4915342148166	2	469.2527770996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVSIALAYGG_	REV__ENST00000275954.3_1_X:34647786-34647951:-|nuORF	29.14955571784316	0.6417842315402807	5				NaN	NaN	0	NaN	4215	3467	7682
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7685	24.578	NaN	3803.6	30	0	818.15	0.106	+			1377	AEVKERVTL	9	60	522.8057738547449	1043.5969947762896	2	522.8060302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEVKERVTL_	EIF2B5|p.L605Pfs*9|1|0.26|ENSG00000145191|chr3:184143504-184143505|-/C|frameshift_variant;ENSG00000145191|ENST00000648915|EIF2B5;ENST00000491144.5_1_3:183857994-183862728:+|nuORF;ENST00000492773.5_1_3:183859720-183860594:+|nuORF	78.26377905018397	0.10505600812668463	5				NaN	NaN	0	NaN	4216	3467	7682
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7686	24.58	NaN	5567.6	30	0	3077.6	0.106				-1	LSTYFCLLLVI	11	40	447.9208953265544	1340.7408565798632	3	447.9209289550781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_LSTYFC(Carbamidomethyl (C))LLLVI_	ENSG00000110900|ENST00000546076|TSPAN11	27.047317107675042	0.7060868989289394	5				NaN	NaN	0	NaN	4217	3467	7682
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7687	24.582	NaN	5414.1	30	0	1978.1	0.106			+	-1	SLCSEIDGPIG	11	48	383.1819922269357	1146.5241472810071	3	383.18170166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_SLC(Carbamidomethyl (C))SEIDGPIG_	REV__CON__Q2KIU3	27.047317107675042	0.7060868989289394	5				NaN	NaN	0	NaN	4218	3467	7682
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7688	24.584	NaN	2482.6	30	0	688.76	0.038			+	30229	PSSQAVQPLQR	11	51	605.8302701901592	1209.6459874471184	2	605.8314208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PSSQAVQPLQR_	REV__ENST00000515209.5_1_5:176759089-176761331:-|nuORF	27.047317107675042	0.7060868989289394	5				NaN	NaN	0	NaN	4219	3467	7682
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7689	24.584	NaN	2451.8	30	0	554.69	0.144			+	29631	PGFIAAVGLSL	11	41	348.87307643907775	1043.5973999174332	3	348.8730773925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PGFIAAVGLSL_	REV__ENSG00000164418|ENST00000369134|GRIK2;REV__GRIK2|p.F694Sfs*16|1|0.22|ENSG00000164418|chr6:101928623-101928623|T/-|frameshift_variant;REV__GRIK2|p.G830Efs*34|1|0.07|ENSG00000164418|chr6:102055506-102055507|-/AA|frameshift_variant;REV__GRIK2|p.L439Wfs*67|1|0.08|ENSG00000164418|chr6:101818479-101818479|T/-|frameshift_variant;REV__GRIK2|p.Q288Rfs*6|1|0.36|ENSG00000164418|chr6:101686265-101686266|AA/-|frameshift_variant;REV__GRIK2|p.Q339Pfs*10|1|0.48|ENSG00000164418|chr6:101799707-101799708|-/C|frameshift_variant;REV__nc|ENSG00000164418|Q13002-2|GRIK2;REV__nc|ENSG00000164418|Q13002-3|GRIK2;REV__nc|ENSG00000164418|Q13002-4|GRIK2;REV__nc|ENSG00000164418|Q13002-5|GRIK2;REV__nc|ENSG00000164418|Q13002-6|GRIK2;REV__nc|ENSG00000164418|Q13002-7|GRIK2	37.15910966729921	0.5968151027006597	5				NaN	NaN	0	NaN	4220	3467	7682
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7705	24.619	NaN	5026.6	30	0	631.43	0.214	+			10735	FAEDGARTV	9	63	483.2376733769096	964.4607938206192	2	483.23779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FAEDGARTV_	ENSG00000157240|ENST00000287934|FZD1	81.52500206392136	0.09095445986635249	5				NaN	NaN	0	NaN	4233	3470	7704
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7706	24.623	NaN	7294.3	30	0	1460.3	0.106	+			6053	AVMGNPVTR	9	59	472.75265215739637	943.4907513815928	2	472.7525634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVMGNPVTR_	ENSG00000136021|ENST00000360820|SCYL2	56.72105179125745	0.24094814563026265	5				NaN	NaN	0	NaN	4234	3470	7704
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7707	24.625	NaN	3623.6	30	0	419.47	0.106			+	18238	INTIHACVK	9	68	499.7762731880337	997.5379934428674	2	500.2816467285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_INTIHACVK_	REV__ENSG00000244462|ENST00000374114|RBM12	27.882242232435846	0.5426732730940306	5				NaN	NaN	0	NaN	4235	3470	7704
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7708	24.627	NaN	2606.7	30	0	193.16	0.106	+			48724	VTTVTISLAN	10	66	509.7933732588645	1017.572193584529	2	510.2977600097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTTVTISLAN_	DNAH9|p.A3342T|1|0.19|ENSG00000007174|chr17:11869224-11869224|G/A|missense_variant	27.882242232435846	0.6521336255503853	5				NaN	NaN	0	NaN	4236	3470	7704
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7709	24.628	NaN	1039.2	30	0	69.655	0.106	+			18046	IISGMVKLEK	10	52	559.3356193871114	1116.6566858410226	2	559.3366088867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IISGMVKLEK_	ENSG00000172139|ENST00000305815|SLC9C1;nc|ENSG00000172139|Q4G0N8-2|SLC9C1;SLC9C1|p.T1117Hfs*4|1|0.38|ENSG00000172139|chr3:112167236-112167236|T/-|frameshift_variant	49.536043120802724	0.461275219792494	5				NaN	NaN	0	NaN	4237	3470	7704
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7710	24.63	NaN	1615.5	30	0	86.285	0.036	+			26107	LSNSHLVLIG	10	57	526.8088989257812	NaN	0	526.8088989257812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSNSHLVLIG_	ENSG00000094804|ENST00000209728|CDC6	37.50817390946774	0.3770175549877019	5				NaN	NaN	0	NaN	4238	3470	7704
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7711	24.631	NaN	1768.5	30	0	396.38	0.141	+			11337	FLDYEAGVLA	10	54	549.2772560920114	1096.5399592508227	2	549.2781372070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FLDYEAGVLA_	ENSG00000106785|ENST00000341469|TRIM14	37.15910966729921	0.575322462179216	5				NaN	NaN	0	NaN	4239	3470	7704
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7729	24.67	NaN	17912	30	0	2971.9	0.214	+			42551	TASAVVQHM	9	69	472.23652513344524	942.4584973336905	2	472.23651123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TASAVVQHM_	ENSG00000115524|ENST00000335508|SF3B1	104.0567914643314	0.03506238181059741	5				NaN	NaN	0	NaN	4254	3473	7728
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7730	24.674	NaN	8372.1	30	0	1018.9	0.106	+			41725	SVSEVVVNR	9	65	494.774364389426	987.534175845652	2	494.7746276855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVSEVVVNR_	ENSG00000099821|ENST00000588649|POLRMT;ENST00000578759.1_1_17:60217316-60217976:-|nuORF	148.98678547993487	0.0071052929883181565	5				NaN	NaN	0	NaN	4255	3473	7728
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7731	24.676	NaN	3775.5	30	0	885.64	0.106	+			42031	SVYYNEATGGK	11	62	594.7798735349852	1187.5451941367703	2	594.7800903320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVYYNEATGGK_	ENSG00000196230|ENST00000327892|TUBB;TUBB|p.G142Afs*23|1|0.35|ENSG00000196230|chr6:30723483-30723483|G/-|frameshift_variant	93.44185321454538	0.08468467990978058	5				NaN	NaN	0	NaN	4256	3473	7728
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7732	24.678	NaN	1786.5	30	0	201.26	0.106			+	45207	TVNQNTVSL	9	58	488.2584228515625	NaN	0	488.2584228515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TVNQNTVSL_	REV__ENSG00000157741|ENST00000473989|UBN2	47.95952297671804	0.22075498469600283	5				NaN	NaN	0	NaN	4257	3473	7728
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7733	24.679	NaN	5678.6	30	0	1760.1	0.106	+			15707	GVNRFCLSK	9	51	360.85878233795194	NaN	0	360.85888671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_GVNRFC(Carbamidomethyl (C))LSK_	ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;nc|ENSG00000185164|Q5JPE7-3|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2;NOMO1|p.P1102Hfs*42|1|0.36|ENSG00000103512|chr16:14886838-14886838|C/-|frameshift_variant	47.95952297671804	0.22075498469600283	5				NaN	NaN	0	NaN	4258	3473	7728
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7734	24.681	NaN	9984.3	30	0	1918.3	0.036	+			1162	AENFKTIKN	9	72	532.790222748508	1063.5658925638159	2	532.7906494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AENFKTIKN_	ENST00000561397.1_1_15:51289960-51293240:+|nuORF	90.36981228632155	0.0638227155548745	5				NaN	NaN	0	NaN	4259	3473	7728
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7735	24.682	NaN	2912.7	30	0	632.47	0.144			+	-1	VGKMMRVKA	9	45	345.86593003391	1034.57596070193	3	345.86572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_VGKMM(Oxidation (M))RVKA_	REV__ENST00000569658.1_1_16:69833186-69833225:+|nuORF	19.1035232394073	0.6112419832031293	5				NaN	NaN	0	NaN	4260	3473	7728
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7748	24.711	NaN	4960.9	30	0	903.23	0.214	+			11856	FTAPSTVGK	9	58	454.2476481297664	906.4807433263328	2	454.2475891113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FTAPSTVGK_	ENSG00000140694|ENST00000437198|PARN;nc|ENSG00000140694|O95453-2|PARN;nc|ENSG00000140694|O95453-3|PARN;nc|ENSG00000140694|O95453-4|PARN	85.16082228582465	0.07850854922700509	5				NaN	NaN	0	NaN	4270	3476	7747
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7749	24.715	NaN	6224.9	30	0	2281.6	0.106			+	46734	VGPPRSGSL	9	49	435.24576885298484	868.4769847727697	2	435.24542236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VGPPRSGSL_	REV__ENSG00000119574|ENST00000594051|ZBTB45	37.81151784470057	0.4459294069877048	5				NaN	NaN	0	NaN	4271	3476	7747
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7750	24.716	NaN	2623.5	30	0	611.31	0.106	+			36687	SGPQNASSL	9	46	430.70896995398556	859.4033869747711	2	430.7087707519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SGPQNASSL_	ENSG00000153113|ENST00000675179|CAST;nc|ENSG00000153113|P20810-10|CAST;nc|ENSG00000153113|P20810-2|CAST;nc|ENSG00000153113|P20810-3|CAST;nc|ENSG00000153113|P20810-4|CAST;nc|ENSG00000153113|P20810-5|CAST;nc|ENSG00000153113|P20810-7|CAST;nc|ENSG00000153113|P20810-8|CAST;nc|ENSG00000153113|P20810-9|CAST;nc|ENSG00000153113|P20810|CAST	70.8162118820467	0.13725933411854815	5				NaN	NaN	0	NaN	4272	3476	7747
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7751	24.718	NaN	1977	30	0	260.96	0.106			+	9316	EIEAGFEAGI	10	61	518.2534366654771	1034.4923203977542	2	518.2536010742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EIEAGFEAGI_	REV__ENSG00000091157|ENST00000254442|WDR7;REV__nc|ENSG00000091157|Q9Y4E6-2|WDR7;REV__WDR7|p.L1146Hfs*7|1|0.04|ENSG00000091157|chr18:56880075-56880076|-/ATAGAATCTCAACT|frameshift_variant	56.72105179125745	0.3956618550748046	5				NaN	NaN	0	NaN	4273	3476	7747
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7752	24.72	NaN	4035	30	0	1763.5	0.106			+	-1	ELRQMILMT	9	34	389.53599549718604	1165.5861570917582	3	389.5357360839844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Oxidation (M)	_ELRQM(Oxidation (M))ILM(Oxidation (M))T_	REV__ENSG00000130396|ENST00000683244|AFDN;REV__nc|ENSG00000130396|P55196-1|AFDN;REV__nc|ENSG00000130396|P55196-2|AFDN;REV__nc|ENSG00000130396|P55196-3|AFDN;REV__nc|ENSG00000130396|P55196-5|AFDN;REV__nc|ENSG00000130396|P55196-6|AFDN;REV__nc|ENSG00000130396|P55196|AFDN	31.529811441608018	0.5085848003137583	5				NaN	NaN	0	NaN	4274	3476	7747
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7753	24.722	NaN	1237.5	30	0	191.84	0.106				-1	VKGLHLNMA	9	43	499.7762731880337	997.5379934428674	2	499.7764587402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_VKGLHLNM(Oxidation (M))A_	ENSG00000143819|ENST00000272167|EPHX1;EPHX1|p.V285Rfs*24|1|0.42|ENSG00000143819|chr1:225839954-225839955|-/C|frameshift_variant	29.14955571784316	0.5308295550522326	5				NaN	NaN	0	NaN	4275	3476	7747
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7754	24.724	NaN	1382.9	30	0	209.35	0.034	+			26521	LTQERSLL	8	50	480.2792022895595	NaN	0	480.27899169921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LTQERSLL_	ENST00000276816.8_1_8:146156998-146157223:-|nuORF	35.61828744233558	1.7418937515398478	5				NaN	NaN	0	NaN	4276	3476	7747
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7767	24.751	NaN	9328.1	30	0	2095.2	0.214			+	11742	FSGSARAL	8	63	404.71915877246363	807.4237646117273	2	404.7190246582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FSGSARAL_	REV__nc|ENSG00000216937|Q96M83-5|CCDC7	63.30626980617807	0.4690498839812213	5				NaN	NaN	0	NaN	4286	3479	7766
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7768	24.755	NaN	5287.7	30	0	1324.5	0.106	+			15123	GTQTVFPSK	9	72	482.7584113801467	963.5022698270934	2	482.7585144042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTQTVFPSK_	ENSG00000156463|ENST00000359120|SH3RF2;ENST00000511705.1_1_5:145435703-145442261:+|nuORF;nc|ENSG00000156463|Q8TEC5-2|SH3RF2;nc|ENSG00000156463|Q8TEC5-3|SH3RF2	66.96192283764107	0.15557981141143568	5				NaN	NaN	0	NaN	4287	3479	7766
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7769	24.757	NaN	7557.7	30	0	1011.3	0.106			+	6927	CNDFYIQFK	9	80	412.1898415166391	1233.5476951501173	3	412.1898498535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_C(Carbamidomethyl (C))NDFYIQFK_	REV__ENSG00000109606|ENST00000336812|DHX15	49.536043120802724	0.308405419312776	5				NaN	NaN	0	NaN	4288	3479	7766
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7770	24.758	NaN	2286	30	0	641.44	0.106				-1	 	0	42	344.225008149864	686.435463366528	2	344.2249450683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4289	3479	7766
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7771	24.76	NaN	1595.6	30	0	209.58	0.106	+			45796	VAGYPRRT	8	55	460.2582357253886	918.5019185175772	2	460.2583312988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VAGYPRRT_	ENST00000270747.7_1_1:16532824-16533518:-|nuORF	60.29395666154354	0.49887135096048313	5				NaN	NaN	0	NaN	4290	3479	7766
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7772	24.762	NaN	2100.4	30	0	322.44	0.036	+			8549	EAVKQYSSY	9	67	537.7592386987477	NaN	0	537.7593994140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EAVKQYSSY_	ENSG00000170525|ENST00000379775|PFKFB3;nc|ENSG00000170525|Q16875-2|PFKFB3;nc|ENSG00000170525|Q16875-3|PFKFB3;nc|ENSG00000170525|Q16875-4|PFKFB3	104.0567914643314	0.015064339666778382	5				NaN	NaN	0	NaN	4291	3479	7766
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7773	24.763	NaN	1774.8	30	0	186.93	0.146	+			49988	WALSTPRMRK	10	52	415.90156993686674	1244.6828804108002	3	416.23590087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_WALSTPRMRK_	DNAH1|p.K1480Sfs*13|1|0.07|ENSG00000114841|chr3:52359941-52359941|G/-|frameshift_variant;ENSG00000114841|ENST00000420323|DNAH1;ENST00000486752.5_1_3:52350520-52422757:+|nuORF;ENST00000497875.1_1_3:52356446-52387784:+|nuORF;nc|ENSG00000114841|Q9P2D7-3|DNAH1;nc|ENSG00000114841|Q9P2D7-6|DNAH1;nc|ENSG00000114841|Q9P2D7-8|DNAH1	28.081489160057373	0.6505064946289502	5				NaN	NaN	0	NaN	4292	3479	7766
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7787	24.794	NaN	17781	30	0	4119.4	0.214	+			16044	HAVGPSTSL	9	59	434.72978127664464	867.4450096200893	2	434.7295227050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HAVGPSTSL_	ENSG00000140262|ENST00000333725|TCF12;nc|ENSG00000140262|Q99081-2|TCF12;nc|ENSG00000140262|Q99081-4|TCF12;nc|ENSG00000140262|Q99081|TCF12;TCF12|p.D536Afs*2|1|0.04|ENSG00000140262|chr15:57263207-57263208|-/C|frameshift_variant;TCF12|p.V474Mfs*18|1|0.15|ENSG00000140262|chr15:57262114-57262123|CTCTGTCAGT/-|frameshift_variant	94.00642277110589	0.05356993013874309	5				NaN	NaN	0	NaN	4303	3482	7786
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7788	24.798	NaN	3343.1	30	0	558.22	0.106	+			16589	HGFGNVHAY	9	61	501.2329370075751	1000.4513210819503	2	501.2327880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HGFGNVHAY_	ENSG00000144354|ENST00000306721|CDCA7;nc|ENSG00000144354|Q9BWT1-3|CDCA7;nc|ENSG00000144354|Q9BWT1-5|CDCA7;nc|ENSG00000144354|Q9BWT1-6|CDCA7;nc|ENSG00000144354|Q9BWT1|CDCA7	79.9392285194092	0.09781135437301468	5				NaN	NaN	0	NaN	4304	3482	7786
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7789	24.8	NaN	3425.6	30	0	304.4	0.106	+			34307	RTLSDYNIQK	10	73	619.3305724194491	1236.6465919056982	2	619.3306274414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RTLSDYNIQK_	ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000392399.3_1_2:137087013-137087097:-|nuORF;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000597285.1_1_19:7730614-7730836:+|nuORF;UBB|p.D191Tfs*35|2|0.18|ENSG00000170315|chr17:16382471-16382471|C/-|frameshift_variant;UBB|p.D191Tfs*35|2|0.18|ENSG00000170315|chr17:16382471-16382471|C/-|frameshift_variant	72.2432373244024	0.2589930451692646	5				NaN	NaN	0	NaN	4305	3482	7786
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7790	24.802	NaN	1449	30	0	170.06	0.106	+			33779	RQAELAQWQK	10	68	629.3387451171875	NaN	0	629.3387451171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RQAELAQWQK_	ENSG00000183978|ENST00000328434|COA3	73.90049950687481	0.12947756519709802	5				NaN	NaN	0	NaN	4306	3482	7786
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7791	24.803	NaN	2242.2	30	0	273.03	0.106	+			13871	GQYGNPLNK	9	58	495.75356833431044	989.4925837354209	2	495.75311279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GQYGNPLNK_	ADAM10|p.P631Lfs*17|1|0.5|ENSG00000137845|chr15:58610430-58610430|G/-|frameshift_variant;ENSG00000137845|ENST00000260408|ADAM10;ENST00000558733.5_1_15:58947546-59041769:-|nuORF;ENST00000560608.5_1_15:58971480-59041769:-|nuORF;ENST00000561149.1_1_15:58974496-59041769:-|nuORF	58.78195531508484	0.22376836668196862	5				NaN	NaN	0	NaN	4307	3482	7786
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7792	24.805	NaN	855.47	30	0	109.69	0.036	+			31300	QIICVVGPHL	10	44	539.8074951171875	NaN	0	539.8074951171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QIICVVGPHL_	ADAM19|p.P794Lfs*18|1|0.07|ENSG00000135074|chr5:157488434-157488434|G/-|frameshift_variant	23.04248740728303	0.42010282974921537	5				NaN	NaN	0	NaN	4308	3482	7786
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7793	24.806	NaN	2202.8	30	0	283.52	0.146	+			33778	RQAELAQWQK	10	48	419.8946106076967	1256.66200242329	3	419.89483642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RQAELAQWQK_	ENSG00000183978|ENST00000328434|COA3	74.1650062923329	0.2432923583094885	5				NaN	NaN	0	NaN	4309	3482	7786
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7807	24.837	NaN	18410	30	0	5082.6	0.214	+			39940	STMGYMAAK	9	70	480.21972228628556	958.4248916393711	2	480.21966552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STMGYMAAK_	ENSG00000080824|ENST00000216281|HSP90AA1;ENST00000436135.1_1_1:158495283-158495625:+|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1	166.67852932204877	0.003333876602083393	5				NaN	NaN	0	NaN	4320	3485	7806
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7808	24.841	NaN	3570.8	30	0	476.26	0.106	+			45080	TVICSTINK	9	73	518.2787730319882	1034.5429931307763	2	518.2791137695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_TVIC(Carbamidomethyl (C))STINK_	ACTR3B-JMJD1C|1|fusion;ENSG00000171988|ENST00000399262|JMJD1C;JMJD1C|p.A2114Cfs*5|1|0.04|ENSG00000171988|chr10:63189399-63189400|-/T|frameshift_variant;JMJD1C|p.I2113Kfs*18|1|0.04|ENSG00000171988|chr10:63189400-63189401|-/TT|frameshift_variant;nc|ENSG00000171988|Q15652-2|JMJD1C;nc|ENSG00000171988|Q15652-3|JMJD1C	72.87924865735499	0.12833875048249987	5				NaN	NaN	0	NaN	4321	3485	7806
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7809	24.843	NaN	2908.5	30	0	275.17	0.106	+			2819	ASAAASGGLLK	11	65	473.27161676186836	NaN	0	473.2717590332031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASAAASGGLLK_	ENSG00000175073|ENST00000310421|VCPIP1;VCPIP1|p.A460Qfs*2|1|0.36|ENSG00000175073|chr8:66665582-66665582|T/-|frameshift_variant;VCPIP1|p.K1108Nfs*37|1|0.15|ENSG00000175073|chr8:66634846-66634846|T/-|frameshift_variant	66.96192283764107	0.16598004834628655	5				NaN	NaN	0	NaN	4322	3485	7806
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7810	24.845	NaN	1983.2	30	0	252.71	0.106	+			47678	VSDSGAHVL	9	58	442.72735800794067	883.4401630826814	2	442.7272644042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSDSGAHVL_	ENSG00000064102|ENST00000261191|INTS13	79.45101966838831	0.09992237243120712	5				NaN	NaN	0	NaN	4323	3485	7806
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7811	24.847	NaN	2224.8	30	0	247.51	0.106	+			27889	MTMDRPLSH	9	64	544.2547367250128	1086.4949205168255	2	544.2555541992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MTMDRPLSH_	ENSG00000185950|ENST00000375856|IRS2	82.7504851949679	0.08565546331141553	5				NaN	NaN	0	NaN	4324	3485	7806
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7812	24.848	NaN	6382	30	0	2725.1	0.035	+			4233	ATGDMSGLLK	10	64	504.75487280510384	1007.4951926770077	2	504.7555236816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_ATGDM(Oxidation (M))SGLLK_	ENSG00000127837|ENST00000248450|AAMP;ENST00000475678.5_1_2:219131145-219134809:-|nuORF;ENST00000489767.5_1_2:219130391-219134818:-|nuORF	82.7504851949679	0.1731497355276012	5				NaN	NaN	0	NaN	4325	3485	7806
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7813	24.849	NaN	1246.8	30	0	209.25	0.14	+			22567	KTSNLLLSH	9	49	506.7929194931822	1011.5712860531644	2	506.7923889160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KTSNLLLSH_	ENSG00000008128|ENST00000404249|CDK11A;ENSG00000248333|ENST00000341832|CDK11B;ENST00000598846.1_1_1:1635046-1639660:-|nuORF;nc|ENSG00000008128|Q9UQ88-10|CDK11A;nc|ENSG00000008128|Q9UQ88-3|CDK11A;nc|ENSG00000008128|Q9UQ88-4|CDK11A;nc|ENSG00000008128|Q9UQ88-5|CDK11A;nc|ENSG00000008128|Q9UQ88-9|CDK11A;nc|ENSG00000008128|Q9UQ88|CDK11A;nc|ENSG00000248333|P21127-10|CDK11B;nc|ENSG00000248333|P21127-12|CDK11B;nc|ENSG00000248333|P21127-3|CDK11B;nc|ENSG00000248333|P21127-4|CDK11B;nc|ENSG00000248333|P21127-5|CDK11B;nc|ENSG00000248333|P21127-6|CDK11B;nc|ENSG00000248333|P21127-8|CDK11B;nc|ENSG00000248333|P21127-9|CDK11B;nc|ENSG00000248333|P21127|CDK11B	72.87924865735499	0.12833875048249987	5				NaN	NaN	0	NaN	4326	3485	7806
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7830	24.886	NaN	7978.1	30	0	2718.1	0.214	+			46482	VETGVLKPG	9	67	450.2631130609397	898.5116731886794	2	450.2632751464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VETGVLKPG_	ENSG00000156508|ENST00000309268|EEF1A1;ENST00000436459.2_1_9:135895553-135896258:+|nuORF;ENST00000450915.1_1_7:88268512-88269193:+|nuORF;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	87.69643885390035	0.07135982304947239	5				NaN	NaN	0	NaN	4340	3488	7829
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7831	24.889	NaN	2016.4	30	0	224.84	0.106	+			50086	WGKGIKCLK	9	54	516.8061145379119	1031.5976761426236	2	516.8065185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WGKGIKCLK_	ENST00000461864.5_1_3:136561040-136561193:-|nuORF	58.22992032128504	0.22837015374068087	5				NaN	NaN	0	NaN	4341	3488	7829
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7832	24.891	NaN	2508.6	30	0	381.5	0.106			+	38547	SSERLALE	8	56	452.74016617835224	NaN	0	452.7403564453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSERLALE_	REV__ENSG00000102858|ENST00000262370|MGRN1;REV__MGRN1|p.A483T|1|0.35|ENSG00000102858|chr16:4682911-4682911|G/A|missense_variant;REV__nc|ENSG00000102858|O60291-3|MGRN1;REV__nc|ENSG00000102858|O60291-4|MGRN1;REV__nc|ENSG00000102858|O60291|MGRN1	40.5726180659479	1.7418937515398478	5				NaN	NaN	0	NaN	4342	3488	7829
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7833	24.893	NaN	1749	30	0	353.06	0.106	+			39615	STIASTASLE	10	47	490.2503918297414	NaN	0	490.25048828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STIASTASLE_	ENSG00000261272|ENST00000561890|MUC22	56.72105179125745	0.2610545891966633	5				NaN	NaN	0	NaN	4343	3488	7829
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7834	24.895	NaN	2610.7	30	0	219.23	0.106	+			46139	VDMHAAADI	9	58	471.71936274745786	941.4241725617157	2	471.71942138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VDMHAAADI_	ENSG00000118007|ENST00000383202|STAG1;nc|ENSG00000118007|Q8WVM7-2|STAG1;NCK1-STAG1|1|fusion;NCK1-STAG1|2|fusion;STAG1|p.K1087Nfs*3|1|0.3|ENSG00000118007|chr3:136349168-136349168|T/-|frameshift_variant	47.91560031466742	0.327412564698279	5				NaN	NaN	0	NaN	4344	3488	7829
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7835	24.897	NaN	1677.3	30	0	593.63	0.037	+			16945	HPNNVVSVKY	10	57	578.8093563657521	1155.6041597983042	2	578.8095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HPNNVVSVKY_	ENSG00000139116|ENST00000361418|KIF21A;ENST00000547733.1_1_12:39688228-39705384:-|nuORF;KIF21A|p.P1541Lfs*6|1|0.27|ENSG00000139116|chr12:39303074-39303074|G/-|frameshift_variant;nc|ENSG00000139116|Q7Z4S6-2|KIF21A;nc|ENSG00000139116|Q7Z4S6-3|KIF21A;nc|ENSG00000139116|Q7Z4S6-4|KIF21A;nc|ENSG00000139116|Q7Z4S6-5|KIF21A;nc|ENSG00000139116|Q7Z4S6-6|KIF21A	112.41091882917199	0.040839805697094264	5				NaN	NaN	0	NaN	4345	3488	7829
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7836	24.897	NaN	2606.2	30	0	772.09	0.14	+			43488	TGPEGHVL	8	45	405.2110568635757	808.4075607939515	2	405.2110595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TGPEGHVL_	DPYSL3|p.A516Qfs*15|1|0.31|ENSG00000113657|chr5:147395638-147395638|G/-|frameshift_variant;ENSG00000092964|ENST00000521913|DPYSL2;ENSG00000113657|ENST00000343218|DPYSL3;ENSG00000151640|ENST00000338492|DPYSL4;ENST00000521983.1_1_8:26484742-26500445:+|nuORF;nc|ENSG00000092964|Q16555-2|DPYSL2;nc|ENSG00000092964|Q16555|DPYSL2;nc|ENSG00000113657|Q14195|DPYSL3	50.0245360154114	0.5941082100236891	5				NaN	NaN	0	NaN	4346	3488	7829
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7851	24.931	NaN	7574.3	30	0	974.71	0.214	+			24085	LEKGKETLL	9	67	515.810583863987	1029.6066147947738	2	515.8109130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LEKGKETLL_	ENSG00000204592|ENST00000376630|HLA-E	122.93914200107957	0.019420478173996256	5				NaN	NaN	0	NaN	4358	3491	7850
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7852	24.934	NaN	9657.3	30	0	4305.6	0.106				-1	 	0	33	322.19368415112143	642.3728153690429	2	322.193603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4359	3491	7850
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7853	24.936	NaN	4200	30	0	1043.8	0.106	+			37890	SNYNLPMHK	9	51	368.5147945498075	1102.5225542496225	3	368.5146179199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SNYNLPMHK_	ENSG00000174444|ENST00000307961|RPL4;ENST00000422486.1_1_3:185135660-185136437:-|nuORF;ENST00000567229.5_1_15:66791747-66793486:-|nuORF	49.536043120802724	0.308405419312776	5				NaN	NaN	0	NaN	4360	3491	7850
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7854	24.938	NaN	6199.1	30	0	1613.9	0.106			+	15744	GVSGTVATLIL	11	54	344.2096341392104	1029.6070730178312	3	344.2098083496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GVSGTVATLIL_	REV__ENSG00000064115|ENST00000343028|TM7SF3	56.632244143249146	0.3535169766007185	5				NaN	NaN	0	NaN	4361	3491	7850
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7855	24.94	NaN	1291.5	30	0	125.31	0.106	+			40099	STNTSLLTSK	10	55	526.2863159179688	NaN	0	526.2863159179688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STNTSLLTSK_	ENSG00000168564|ENST00000504169|CDKN2AIP	22.579656572578934	0.4201028297492154	5				NaN	NaN	0	NaN	4362	3491	7850
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7856	24.942	NaN	2616.1	30	0	247.22	0.036	+			24988	LLEASRLYQ	9	67	546.8058278543585	1091.597102775517	2	546.8078002929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LLEASRLYQ_	ENSG00000221829|ENST00000378643|FANCG	39.252832667884924	0.4290233611298554	5				NaN	NaN	0	NaN	4363	3491	7850
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7857	24.942	NaN	2303.9	30	0	286.89	0.139				-1	ALSLGCRAP	9	54	472.75444079764674	943.4943286620935	2	473.7821044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_ALSLGC(Carbamidomethyl (C))RAP_	ENST00000339464.8_1_22:46316419-46316704:-|nuORF	29.14955571784316	0.5308295550522326	5				NaN	NaN	0	NaN	4364	3491	7850
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7874	24.979	NaN	16279	30	0	3048.7	0.214	+			2338	AMSARAEAI	9	72	460.23651516462405	918.4584773960481	2	460.2366638183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AMSARAEAI_	ENSG00000162244|ENST00000294189|RPL29;ENST00000480306.5_1_3:52027767-52028806:-|nuORF	80.45461616416974	0.09558281504443908	5				NaN	NaN	0	NaN	4378	3494	7873
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7875	24.983	NaN	7998.4	30	0	597.38	0.106	+			35893	SEEVVSREV	9	72	517.2614795250292	1032.5084061168584	2	517.261962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEEVVSREV_	ENSG00000160789|ENST00000368300|LMNA;nc|ENSG00000160789|P02545-2|LMNA;nc|ENSG00000160789|P02545-3|LMNA;nc|ENSG00000160789|P02545-6|LMNA	93.5975768576971	0.05472259948179787	5				NaN	NaN	0	NaN	4379	3494	7873
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7876	24.985	NaN	1901.8	30	0	298.62	0.106			+	-1	SVAEDYSPLM	10	50	564.248537440147	1126.4825219470938	2	564.2489013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_SVAEDYSPLM(Oxidation (M))_	REV__ENSG00000143502|ENST00000366878|SUSD4;REV__nc|ENSG00000143502|Q5VX71-2|SUSD4;REV__SUSD4|p.P412Qfs*51|2|0.24|ENSG00000143502|chr1:223223458-223223458|G/-|frameshift_variant	26.69291269510374	0.6618461711292317	5				NaN	NaN	0	NaN	4380	3494	7873
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7877	24.987	NaN	2025.4	30	0	330.99	0.106			+	41854	SVTAGITEK	9	57	453.25009323224094	NaN	0	453.2503662109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVTAGITEK_	REV__ENSG00000080200|ENST00000389622|CRYBG3	49.44154591367651	0.21054156626303966	5				NaN	NaN	0	NaN	4381	3494	7873
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7878	24.988	NaN	2037.8	30	0	280.96	0.106	+			50385	YAACQSHAF	9	60	527.7231767823033	1053.4318006314065	2	527.7239379882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_YAAC(Carbamidomethyl (C))QSHAF_	ENSG00000244187|ENST00000290079|TMEM141;ENST00000465017.5_1_9:139685862-139687281:+|nuORF;ENST00000489739.1_1_9:139685858-139686514:+|nuORF	67.49366992349736	0.1516260258713357	5				NaN	NaN	0	NaN	4382	3494	7873
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7879	24.99	NaN	4368.1	30	0	2512.4	0.036	+			15645	GVLGSSKVLAK	11	40	353.5570656945216	1057.649367683765	3	353.5570373535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GVLGSSKVLAK_	ENSG00000160216|ENST00000291572|AGPAT3;nc|ENSG00000160216|Q9NRZ7-2|AGPAT3;nc|ENSG00000160216|Q9NRZ7-3|AGPAT3	42.33807565288922	0.5259510355945483	5				NaN	NaN	0	NaN	4383	3494	7873
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7880	24.991	NaN	1367.7	30	0	126.51	0.14	+			18447	ISDLVRRR	8	52	507.81354957352465	1013.6125462138493	2	507.8132629394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ISDLVRRR_	ENSG00000149090|ENST00000619888|PAMR1;nc|ENSG00000149090|Q6UXH9-2|PAMR1;nc|ENSG00000149090|Q6UXH9-3|PAMR1;PAMR1|p.V621Gfs*11|1|0.43|ENSG00000149090|chr11:35432657-35432658|-/C|frameshift_variant	44.116797842482775	0.6307669463330267	5				NaN	NaN	0	NaN	4384	3494	7873
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7894	25.022	NaN	1622.8	30	0	148.79	0.214	+			8349	EALEAVKNA	9	48	472.75444079764674	943.4943286620935	2	472.755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EALEAVKNA_	CTNNA2|p.E411Kfs*4|1|0.19|ENSG00000066032|chr2:80419542-80419542|G/-|frameshift_variant;ENSG00000066032|ENST00000402739|CTNNA2;nc|ENSG00000066032|P26232-2|CTNNA2;nc|ENSG00000066032|P26232-3|CTNNA2;nc|ENSG00000066032|P26232-5|CTNNA2	64.20726635412375	0.17854274437659667	5				NaN	NaN	0	NaN	4395	3497	7893
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7895	25.026	NaN	2209.9	30	0	307.62	0.106	+			10323	ETSHESVD	8	55	452.18827096972836	902.3619890062567	2	451.7867736816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ETSHESVD_	ENSG00000148735|ENST00000694986|PLEKHS1;nc|ENSG00000148735|Q5SXH7-1|PLEKHS1;nc|ENSG00000148735|Q5SXH7-2|PLEKHS1;nc|ENSG00000148735|Q5SXH7-3|PLEKHS1;nc|ENSG00000148735|Q5SXH7-4|PLEKHS1;nc|ENSG00000148735|Q5SXH7|PLEKHS1;PLEKHS1|p.R353Tfs*17|1|0.24|ENSG00000148735|chr10:113777141-113777142|-/C|frameshift_variant	42.47446043378293	0.6409579893742323	5				NaN	NaN	0	NaN	4396	3497	7893
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7896	25.028	NaN	1134.5	30	0	116.89	0.106				-1	VVMVNQGLTK	10	51	552.8080107497146	NaN	0	552.8075561523438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_VVM(Oxidation (M))VNQGLTK_	ENSG00000134057|ENST00000256442|CCNB1	33.921630207806714	0.38879399011744475	5				NaN	NaN	0	NaN	4397	3497	7893
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7897	25.03	NaN	2382.1	30	0	553.24	0.106			+	49308	VVQSRLDKASL	11	51	405.9079148359661	1214.7019151080983	3	405.9078674316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVQSRLDKASL_	REV__CLASP2|p.L1169Ffs*6|1|0.14|ENSG00000163539|chr3:33510729-33510730|-/A|frameshift_variant;REV__CLASP2|p.M744Nfs*4|1|0.19|ENSG00000163539|chr3:33560868-33560869|-/T|frameshift_variant;REV__CLASP2|p.M744Wfs*33|2|0.29|ENSG00000163539|chr3:33560869-33560869|T/-|frameshift_variant;REV__CLASP2|p.N188Kfs*2|1|0.21|ENSG00000163539|chr3:33619657-33619658|-/T|frameshift_variant;REV__ENSG00000074054|ENST00000696935|CLASP1;REV__ENSG00000163539|ENST00000682230|CLASP2;REV__ENST00000491646.1_1_2:122217554-122217677:-|nuORF;REV__nc|ENSG00000074054|Q7Z460-2|CLASP1;REV__nc|ENSG00000074054|Q7Z460-3|CLASP1;REV__nc|ENSG00000074054|Q7Z460-4|CLASP1;REV__nc|ENSG00000074054|Q7Z460-5|CLASP1;REV__nc|ENSG00000074054|Q7Z460|CLASP1;REV__nc|ENSG00000163539|O75122-2|CLASP2;REV__nc|ENSG00000163539|O75122-3|CLASP2;REV__nc|ENSG00000163539|O75122|CLASP2	36.31764250033197	0.6083289427130232	5				NaN	NaN	0	NaN	4398	3497	7893
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7898	25.031	NaN	976.7	30	0	116.76	0.106	+			34815	RYLENGKETL	10	43	611.8248878955337	1221.6352228578673	2	612.3264770507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RYLENGKETL_	ENSG00000204525|ENST00000376228|HLA-C;ENSG00000204642|ENST00000259951|HLA-F;ENSG00000206503|ENST00000376809|HLA-A;ENST00000484704.5_1_6:29691969-29693843:+|nuORF;ENST00000487245.5_1_6:31236948-31239147:-|nuORF;ENST00000495183.5_1_6:29910749-29913287:+|nuORF;ENST00000496081.5_1_6:29910330-29912419:+|nuORF;HLA-C|p.A269Gfs*66|1|0.07|ENSG00000204525|chr6:31270299-31270300|-/C|frameshift_variant;nc|ENSG00000204525|P10321-2|HLA-C;nc|ENSG00000204642|P30511-2|HLA-F;nc|ENSG00000204642|P30511|HLA-F;nc|ENSG00000206341|P01893|HLA-H;nc|ENSG00000206503|P04439-2|HLA-A	27.047317107675042	0.6589519614906109	5				NaN	NaN	0	NaN	4399	3497	7893
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7899	25.033	NaN	8353.3	30	0	2792.5	0.038	+			21993	KSFDTSLIRK	10	53	398.89942238950704	1193.6764377687211	3	398.8992919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KSFDTSLIRK_	ENSG00000182220|ENST00000636580|ATP6AP2;nc|ENSG00000182220|O75787-2|ATP6AP2	70.39856735676683	0.27406383984062843	5				NaN	NaN	0	NaN	4400	3497	7893
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7900	25.034	NaN	2667.2	30	0	789.87	0.141	+			14288	GSVWWKIAK	9	37	358.8746210785413	1073.602033835824	3	358.8747253417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GSVWWKIAK_	USP24|p.R987W|1|0.2|ENSG00000162402|chr1:55137874-55137874|G/A|missense_variant	24.519189625965996	0.574102787014149	5				NaN	NaN	0	NaN	4401	3497	7893
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7914	25.066	NaN	1956.9	30	0	323.87	0.213	+			33125	RENTQTTIKL	10	60	602.3382261290124	1202.6618993248246	2	602.33837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RENTQTTIKL_	ENSG00000165119|ENST00000376263|HNRNPK;ENST00000485383.1_1_3:96068520-96068997:+|nuORF;nc|ENSG00000165119|P61978-3|HNRNPK;nc|ENSG00000165119|P61978|HNRNPK	109.47833844074708	0.04954876308859735	5				NaN	NaN	0	NaN	4412	3500	7913
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7915	25.069	NaN	3517.6	30	0	1448	0.106	+			32288	QTMSDTTFK	9	57	529.7442224153759	1057.4738918975518	2	529.7449951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QTMSDTTFK_	ENSG00000116489|ENST00000263168|CAPZA1;ENSG00000198898|ENST00000361183|CAPZA2;ENST00000426421.5_1_7:116544367-116557918:+|nuORF;ENST00000466066.1_1_1:113202257-113212751:+|nuORF;ENST00000565906.2_1_15:89532752-89533049:-|nuORF	47.95952297671804	0.32689736945648856	5				NaN	NaN	0	NaN	4413	3500	7913
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7916	25.071	NaN	3677.8	30	0	846.96	0.106	+			32699	RAGVTTPAP	9	53	435.24576885298484	868.4769847727697	2	435.24530029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RAGVTTPAP_	ENSG00000157303|ENST00000375472|SUSD3	27.882242232435846	0.5426732730940306	5				NaN	NaN	0	NaN	4414	3500	7913
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7917	25.073	NaN	4306.3	30	0	771.77	0.106	+			2951	ASEAIKGAVVG	11	64	501.28491064206787	1000.5552683509358	2	501.2848815917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASEAIKGAVVG_	ENSG00000113013|ENST00000297185|HSPA9;ENST00000506477.5_1_5:137906647-137911007:-|nuORF	63.53385203322761	0.2919106290768168	5				NaN	NaN	0	NaN	4415	3500	7913
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7918	25.075	NaN	3473.2	30	0	460.78	0.106	+			8387	EAMVGHEM	8	50	452.18827096972836	902.3619890062567	2	452.1881408691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EAMVGHEM_	ENSG00000144802|ENST00000326172|NFKBIZ;nc|ENSG00000144802|Q9BYH8-2|NFKBIZ;nc|ENSG00000144802|Q9BYH8-3|NFKBIZ	50.0245360154114	0.5941082100236891	5				NaN	NaN	0	NaN	4416	3500	7913
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7919	25.076	NaN	8805.1	30	0	1754	0.033			+	13554	GLSRLALN	8	54	422.255859992295	842.49716705139	2	422.2562255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GLSRLALN_	REV__ENSG00000167548|ENST00000301067|KMT2D;REV__KMT2D|p.A5076Hfs*2|1|0.12|ENSG00000167548|chr12:49026740-49026740|C/-|frameshift_variant;REV__KMT2D|p.G5182Afs*61|1|0.57|ENSG00000167548|chr12:49026421-49026421|C/-|frameshift_variant;REV__KMT2D|p.Q4156Nfs*5|1|0.15|ENSG00000167548|chr12:49032239-49032239|G/-|frameshift_variant;REV__KMT2D|p.S4327Afs*57|1|0.44|ENSG00000167548|chr12:49031727-49031727|G/-|frameshift_variant;REV__KMT2D|p.T4629Hfs*18|1|0.31|ENSG00000167548|chr12:49030394-49030395|-/G|frameshift_variant;REV__KMT2D|p.T4629Pfs*11|1|0.27|ENSG00000167548|chr12:49030395-49030395|G/-|frameshift_variant;REV__nc|ENSG00000167548|O14686-3|KMT2D	76.7741389293348	0.3504530765139327	5				NaN	NaN	0	NaN	4417	3500	7913
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7920	25.077	NaN	2083.2	30	0	360.21	0.139	+			29760	PHVGALRAL	9	55	467.2846507932376	NaN	0	467.28466796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PHVGALRAL_	ENSG00000171017|ENST00000306708|LRRC8E	42.47446043378293	0.25855550551448697	5				NaN	NaN	0	NaN	4418	3500	7913
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7934	25.109	NaN	2361.7	30	0	458.94	0.214	+			22529	KTQNFLIQK	9	63	560.329233640656	1118.6439143481118	2	560.3295288085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTQNFLIQK_	BCL10|p.S167Lfs*6|2|0.31|ENSG00000142867|chr1:85267830-85267830|A/-|frameshift_variant;ENSG00000142867|ENST00000648566|BCL10	104.42354056486148	0.0346881550498418	5				NaN	NaN	0	NaN	4429	3503	7933
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7935	25.112	NaN	1252.6	30	0	123.55	0.106			+	-1	LPPRRCCL	8	56	536.2829639892491	NaN	0	536.28271484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_LPPRRC(Carbamidomethyl (C))C(Carbamidomethyl (C))L_	REV__ENSG00000156170|ENST00000396124|NDUFAF6;REV__nc|ENSG00000156170|Q330K2-3|NDUFAF6	28.2542754592877	1.7418937515398478	5				NaN	NaN	0	NaN	4430	3503	7933
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7936	25.114	NaN	2282.1	30	0	176.4	0.106	+			16403	HEQSRIITV	9	64	541.800930254927	1081.587307576654	2	541.8016357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HEQSRIITV_	ENSG00000158006|ENST00000374282|PAFAH2	41.42661286455405	0.403525789677298	5				NaN	NaN	0	NaN	4431	3503	7933
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7937	25.116	NaN	1685.7	30	0	198.24	0.106			+	7504	DGKVPKGYT	9	56	482.7584113801467	963.5022698270934	2	482.757568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DGKVPKGYT_	REV__CD109|p.N1348Lfs*7|1|0.05|ENSG00000156535|chr6:73818517-73818518|-/CTCAGGAA|frameshift_variant;REV__CD109|p.Q424Kfs*20|1|0.29|ENSG00000156535|chr6:73766088-73766088|C/-|frameshift_variant;REV__CD109|p.T265M|1|0.42|ENSG00000156535|chr6:73762419-73762419|C/T|missense_variant;REV__ENSG00000156535|ENST00000287097|CD109;REV__nc|ENSG00000156535|Q6YHK3-2|CD109;REV__nc|ENSG00000156535|Q6YHK3-3|CD109;REV__nc|ENSG00000156535|Q6YHK3-4|CD109	25.57405402267927	0.5642445186134241	5				NaN	NaN	0	NaN	4432	3503	7933
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7938	25.118	NaN	2078.6	30	0	505.32	0.106				-1	 	0	46	434.78008882438263	867.5456247155653	2	434.78033447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4433	3503	7933
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7939	25.119	NaN	588.29	30	0	46.133	0.035				-1	LSERDIAMA	9	36	511.2513843622547	NaN	0	511.2521667480469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_LSERDIAM(Oxidation (M))A_	ENSG00000141452|ENST00000269221|RMC1;ENST00000589215.5_1_18:21087981-21111645:+|nuORF	20.94693142431847	0.3660861156085067	5				NaN	NaN	0	NaN	4434	3503	7933
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7955	25.153	NaN	5643.7	30	0	931.89	0.214	+			13872	GQYGNPLNK	9	59	495.75356833431044	989.4925837354209	2	495.75347900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GQYGNPLNK_	ADAM10|p.P631Lfs*17|1|0.5|ENSG00000137845|chr15:58610430-58610430|G/-|frameshift_variant;ENSG00000137845|ENST00000260408|ADAM10;ENST00000558733.5_1_15:58947546-59041769:-|nuORF;ENST00000560608.5_1_15:58971480-59041769:-|nuORF;ENST00000561149.1_1_15:58974496-59041769:-|nuORF	108.08749611321984	0.03094949498378333	5				NaN	NaN	0	NaN	4447	3506	7954
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7956	25.156	NaN	5314.5	30	0	989.07	0.106	+			26392	LTEAPLNPK	9	68	491.7819464679329	981.5493400026659	2	491.78204345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LTEAPLNPK_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000403258.1_1_6:88986231-88986483:-|nuORF;ENST00000446382.2_1_9:6834760-6835018:+|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000502306.1_1_5:15450853-15451165:+|nuORF;ENST00000567299.1_1_19:9629420-9629708:+|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;nc|ENSG00000204434|Q9BYX7|POTEKP	101.60071028292904	0.0375685401170269	5				NaN	NaN	0	NaN	4448	3506	7954
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7957	25.158	NaN	1148.8	30	0	102.29	0.106			+	-1	SPAPCCSPGSV	11	57	531.2232055664062	NaN	0	531.2232055664062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SPAPC(Carbamidomethyl (C))CSPGSV_	REV__ENST00000429422.5_2_3:47893780-47893864:-|nuORF	54.776311868738084	0.2810134756352116	5				NaN	NaN	0	NaN	4449	3506	7954
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7958	25.16	NaN	1724.6	30	0	326.3	0.106	+			15736	GVSAAIYSK	9	51	448.2478156301916	NaN	0	448.2478942871094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GVSAAIYSK_	ENSG00000123146|ENST00000242786|ADGRE5;nc|ENSG00000123146|P48960-2|ADGRE5;nc|ENSG00000123146|P48960-3|ADGRE5	54.722347961057174	0.17414871455573902	5				NaN	NaN	0	NaN	4450	3506	7954
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7959	25.162	NaN	1265.9	30	0	151.27	0.106	+			7099	CWLLTVVLH	9	57	542.3026733398438	NaN	0	542.3026733398438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_CWLLTVVLH_	ITGA1|p.R24H|1|0.24|ENSG00000213949|chr5:52849374-52849374|G/A|missense_variant	33.51558372728122	0.30835390848773375	5				NaN	NaN	0	NaN	4451	3506	7954
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7960	25.164	NaN	1311.3	30	0	139.62	0.035	+			10079	ESINVFLAH	9	54	515.2708740234375	NaN	0	515.2708740234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ESINVFLAH_	ENST00000450253.6_1_4:99801895-99802249:-|nuORF	33.921630207806714	0.3063038642147651	5				NaN	NaN	0	NaN	4452	3506	7954
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7961	25.164	NaN	1144.9	30	0	125.51	0.142			+	20647	KGINTHTHKI	10	53	574.829853546598	NaN	0	574.8301391601562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KGINTHTHKI_	REV__ENST00000371146.5_1_1:62916657-62916786:+|nuORF	36.31764250033197	0.3809266711384728	5				NaN	NaN	0	NaN	4453	3506	7954
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7973	25.192	NaN	7973.8	30	0	1524	0.214	+			39548	STFSTNYR	8	63	488.23010188900776	974.4456508448155	2	488.2298583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STFSTNYR_	ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53342924-53344195:+|nuORF	90.36981228632155	0.27635063874291205	5				NaN	NaN	0	NaN	4462	3509	7972
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7974	25.195	NaN	3678.9	30	0	341	0.106	+			15319	GTVIHFNNPK	10	62	563.8038386701262	1125.5931244070523	2	563.8041381835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTVIHFNNPK_	ENSG00000134717|ENST00000313334|BTF3L4;ENSG00000145741|ENST00000380591|BTF3;nc|ENSG00000134717|Q96K17-2|BTF3L4;nc|ENSG00000145741|P20290-2|BTF3	72.87924865735499	0.25379688738724415	5				NaN	NaN	0	NaN	4463	3509	7972
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7975	25.197	NaN	4117.6	30	0	715.72	0.106	+			23853	LDDFLLTY	8	65	500.2547830145653	998.4950130959306	2	500.25274658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LDDFLLTY_	ENSG00000136237|ENST00000665637|RAPGEF5;nc|ENSG00000136237|Q92565-2|RAPGEF5;nc|ENSG00000136237|Q92565|RAPGEF5	42.47446043378293	0.6409579893742323	5				NaN	NaN	0	NaN	4464	3509	7972
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7976	25.199	NaN	1734.3	30	0	263.97	0.106			+	51280	YRTTLLIQ	8	56	504.2979874656792	NaN	0	504.29791259765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YRTTLLIQ_	REV__APAF1|p.D266Y|1|0.26|ENSG00000120868|chr12:98662541-98662541|G/T|missense_variant	37.15910966729921	1.7418937515398478	5				NaN	NaN	0	NaN	4465	3509	7972
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7977	25.201	NaN	1345.8	30	0	187.48	0.106			+	17940	IGNCDLIYQ	9	53	519.7522356802472	NaN	0	519.7520751953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IGNCDLIYQ_	REV__nc|ENSG00000157152|Q92777-2|SYN2	56.72105179125745	0.16330365735109603	5				NaN	NaN	0	NaN	4466	3509	7972
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7978	25.203	NaN	1981.5	30	0	364.63	0.033	+			13354	GKVLDHAM	8	47	435.7285720160657	869.4425910989314	2	435.7281494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GKVLDHAM_	ENSG00000173898|ENST00000533211|SPTBN2;nc|ENSG00000173898|O15020-2|SPTBN2;SPTBN2|p.P924Qfs*35|1|0.39|ENSG00000173898|chr11:66701629-66701629|G/-|frameshift_variant	35.200714571348534	0.6875396545722289	5				NaN	NaN	0	NaN	4467	3509	7972
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7979	25.203	NaN	1680.3	30	0	279.54	0.138	+			725	AEAVRTTL	8	56	430.7456777964216	859.4768026596432	2	430.7452697753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AEAVRTTL_	ENSG00000135624|ENST00000258091|CCT7;ENST00000461290.5_1_2:73461506-73471178:+|nuORF;ENST00000464397.1_1_2:73461506-73466971:+|nuORF;ENST00000480489.5_1_2:73461506-73470269:+|nuORF	47.95952297671804	0.6069220427029525	5				NaN	NaN	0	NaN	4468	3509	7972
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7992	25.232	NaN	51550	30	0	6960.7	0.214	+			15464	GTYVSSVPR	9	68	483.25616559470996	964.4977782562199	2	483.2560119628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTYVSSVPR_	ENSG00000204252|ENST00000229829|HLA-DOA;ENST00000485901.1_1_6:32974617-32975137:-|nuORF	120.8684288430529	0.02067403653475984	5				NaN	NaN	0	NaN	4478	3512	7991
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7993	25.236	NaN	3493.4	30	0	261.65	0.106	+			36100	SEKHIEVEV	9	69	535.2792814787751	1068.5440100243502	2	535.2794799804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEKHIEVEV_	ENSG00000130935|ENST00000253247|NOL11;ENST00000583108.5_1_17:65733207-65733809:+|nuORF	51.19269402634007	0.2889735674168909	5				NaN	NaN	0	NaN	4479	3512	7991
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7994	25.238	NaN	8999.2	30	0	3385.5	0.106			+	13079	GFLQLFKAT	9	47	342.199178838959	1023.5757071170772	3	342.19903564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GFLQLFKAT_	REV__TRIM47|p.D438del|1|0.31|ENSG00000132481|chr17:75875086-75875088|GTC/-|inframe_deletion	23.04248740728303	0.5879033540491928	5				NaN	NaN	0	NaN	4480	3512	7991
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7995	25.24	NaN	2727.4	30	0	202.32	0.106	+			10462	EVNPNTRVM	9	64	530.2661967352813	1058.5178405373624	2	530.2662963867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EVNPNTRVM_	ENSG00000123353|ENST00000243045|ORMDL2;ENSG00000128699|ENST00000392349|ORMDL1;ENSG00000172057|ENST00000304046|ORMDL3;nc|ENSG00000172057|Q8N138-4|ORMDL3	110.11987700582712	0.028875675806141952	5				NaN	NaN	0	NaN	4481	3512	7991
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7996	25.241	NaN	1078.7	30	0	232.65	0.106			+	-1	SKGPMVMTQPA	11	58	581.7849384358955	1161.5553239385908	2	581.7837524414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_SKGPMVM(Oxidation (M))TQPA_	REV__ENST00000495426.1_1_7:33545212-33573811:+|nuORF	27.047317107675042	0.7060868989289394	5				NaN	NaN	0	NaN	4482	3512	7991
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7997	25.243	NaN	1278.8	30	0	221.07	0.035	+			27772	MRNAYEEV	8	41	506.2316051459739	1010.4486573587478	2	506.2317810058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MRNAYEEV_	ENSG00000006788|ENST00000252172|MYH13	29.14955571784316	0.7342621283720113	5				NaN	NaN	0	NaN	4483	3512	7991
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7998	25.244	NaN	1452.4	30	0	123.29	0.139			+	9631	ELQRQLAC	8	55	480.7496850941499	959.4848172550999	2	480.7495422363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ELQRQLAC_	REV__AKAP9|p.L1203Yfs*16|1|0.24|ENSG00000127914|chr7:92014319-92014319|T/-|frameshift_variant;REV__AKAP9|p.Q3083Nfs*28|1|0.15|ENSG00000127914|chr7:92089389-92089390|-/TGAATATCAAGCAGCTATGGAATGCC|frameshift_variant;REV__AKAP9|p.T1942Lfs*3|3|0.18|ENSG00000127914|chr7:92062328-92062328|A/-|frameshift_variant;REV__ENSG00000127914|ENST00000356239|AKAP9;REV__ENST00000493453.1_1_7:91570251-91670224:+|nuORF;REV__nc|ENSG00000127914|Q99996-1|AKAP9;REV__nc|ENSG00000127914|Q99996-3|AKAP9;REV__nc|ENSG00000127914|Q99996-4|AKAP9;REV__nc|ENSG00000127914|Q99996-5|AKAP9;REV__nc|ENSG00000127914|Q99996-6|AKAP9	33.51558372728122	0.7005509609380386	5				NaN	NaN	0	NaN	4484	3512	7991
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8012	25.275	NaN	1998.4	30	0	506.09	0.214	+			8444	EARKQVEVF	9	63	553.3052754899128	NaN	0	553.3048706054688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EARKQVEVF_	ENSG00000100911|ENST00000216802|PSME2;ENST00000471700.6_1_14:24612807-24615772:-|nuORF;ENST00000558931.5_1_14:24615401-24615790:-|nuORF;ENST00000559493.5_1_14:24614434-24615772:-|nuORF;ENST00000560592.5_1_14:24614852-24615790:-|nuORF	51.52775601994872	0.19616436856719055	5				NaN	NaN	0	NaN	4495	3515	8011
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8013	25.279	NaN	5350.8	30	0	1854.4	0.106	+			35293	SALYTTKETI	10	40	376.2051273108262	1125.5935525326786	3	376.2051696777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SALYTTKETI_	ENSG00000197969|ENST00000360280|VPS13A;nc|ENSG00000197969|Q96RL7-2|VPS13A;nc|ENSG00000197969|Q96RL7-3|VPS13A;nc|ENSG00000197969|Q96RL7-4|VPS13A;VPS13A|p.I1709Nfs*6|1|0.34|ENSG00000197969|chr9:77318397-77318398|-/A|frameshift_variant;VPS13A|p.M1697Cfs*13|1|0.07|ENSG00000197969|chr9:77318363-77318363|A/-|frameshift_variant;VPS13A|p.N2071Tfs*18|2|0.32|ENSG00000197969|chr9:77337367-77337367|A/-|frameshift_variant;VPS13A|p.Y2315Ifs*2|1|0.09|ENSG00000197969|chr9:77340463-77340463|T/-|frameshift_variant	30.503639358989545	0.6307262373768582	5				NaN	NaN	0	NaN	4496	3515	8011
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8014	25.281	NaN	4108.9	30	0	717.99	0.106			+	16735	HLLNLKAE	8	62	469.2769709283687	936.5393889235374	2	469.276611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HLLNLKAE_	REV__ENSG00000169918|ENST00000307050|OTUD7A;REV__nc|ENSG00000169918|Q8TE49|OTUD7A;REV__OTUD7A|p.V467Cfs*62|1|0.44|ENSG00000169918|chr15:31484676-31484676|C/-|frameshift_variant	66.42927471994793	0.4381325844043345	5				NaN	NaN	0	NaN	4497	3515	8011
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8015	25.283	NaN	2225.4	30	0	763.09	0.106			+	29871	PLGHVLGV	8	43	396.2423591069398	790.4701652806796	2	396.2425842285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PLGHVLGV_	REV__ENSG00000148154|ENST00000374279|UGCG;REV__UGCG|p.L365Cfs*9|4|0.31|ENSG00000148154|chr9:111932900-111932900|T/-|frameshift_variant	16.704963439144045	0.7946246187734944	5				NaN	NaN	0	NaN	4498	3515	8011
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8016	25.284	NaN	2160.4	30	0	435.47	0.106	+			2524	APVKPGPAL	9	45	425.2631265153508	848.5117000975016	2	425.2630615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_APVKPGPAL_	ENSG00000050165|ENST00000683431|DKK3;ENST00000526218.5_1_11:12000483-12031257:-|nuORF;ENST00000530694.5_1_11:12023362-12031257:-|nuORF;ENST00000533900.1_1_11:12023572-12030129:-|nuORF;ENST00000534479.5_1_11:12023699-12030797:-|nuORF	73.97473282117947	0.12360187025703594	5				NaN	NaN	0	NaN	4499	3515	8011
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8017	25.286	NaN	856.69	30	0	313.83	0.035			+	-1	KSLVEMRK	8	21	336.19558747150603	1005.5649330147181	3	336.19573974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_KSLVEM(Oxidation (M))RK_	REV__ENST00000263849.8_1_8:79578375-79588093:+|nuORF	9.705651100619752	0.783554011373258	5				NaN	NaN	0	NaN	4500	3515	8011
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8018	25.287	NaN	1626.9	30	0	316.76	0.141	+			16932	HPNDDDVHF	9	55	548.2278466818294	1094.4411404304587	2	548.2288208007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HPNDDDVHF_	ENSG00000114127|ENST00000392981|XRN1;nc|ENSG00000114127|Q8IZH2-3|XRN1;nc|ENSG00000114127|Q8IZH2|XRN1;XRN1|p.L525Yfs*9|1|0.08|ENSG00000114127|chr3:142414154-142414154|A/-|frameshift_variant;XRN1|p.L671*|1|0.28|ENSG00000114127|chr3:142403765-142403765|A/-|frameshift_variant;XRN1|p.L671Ffs*2|1|0.14|ENSG00000114127|chr3:142403764-142403765|-/AA|frameshift_variant;XRN1|p.M1309Cfs*14|1|0.4|ENSG00000114127|chr3:142335462-142335462|T/-|frameshift_variant;XRN1|p.R1611Gfs*34|5|0.22|ENSG00000114127|chr3:142311801-142311801|T/-|frameshift_variant	74.25504064058377	0.12238981753128622	5				NaN	NaN	0	NaN	4501	3515	8011
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8033	25.32	NaN	9943.6	30	0	1915.7	0.214	+			45201	TVNPQFVQK	9	77	530.7926239374194	1059.5706949416387	2	530.793701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVNPQFVQK_	ENSG00000141030|ENST00000268717|COPS3;ENST00000486032.1_1_17:17150414-17150880:-|nuORF;nc|ENSG00000141030|Q9UNS2-2|COPS3	67.49366992349736	0.1516260258713357	5				NaN	NaN	0	NaN	4513	3518	8032
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8034	25.324	NaN	5451.8	30	0	1288.2	0.106	+			39099	SSSTVSYLK	9	62	486.2558848626213	970.4972167920427	2	486.2558288574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSSTVSYLK_	ABCA1|p.L2013*|1|0.14|ENSG00000165029|chr9:104788457-104788457|A/-|frameshift_variant;ENSG00000165029|ENST00000374736|ABCA1	61.691277971877994	0.19951612995419254	5				NaN	NaN	0	NaN	4514	3518	8032
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8035	25.326	NaN	4635.2	30	0	313.98	0.106	+			43226	TEVLKTHGL	9	68	499.2874003186973	996.5602477041946	2	499.2873840332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TEVLKTHGL_	ENSG00000142541|ENST00000391857|RPL13A	106.68306549817024	0.032382560583716295	5				NaN	NaN	0	NaN	4515	3518	8032
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8036	25.327	NaN	13968	30	0	1538.4	0.106	+			10746	FAEGQGRAL	9	72	474.74838417507084	947.4822154169417	2	474.74871826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FAEGQGRAL_	ENSG00000103335|ENST00000301015|PIEZO1;PIEZO1|p.A2395Pfs*117|1|0.37|ENSG00000103335|chr16:88716061-88716067|CCCCGCA/-|frameshift_variant;PIEZO1|p.F1977Lfs*33|1|0.38|ENSG00000103335|chr16:88720403-88720403|A/-|frameshift_variant	139.97047562133406	0.010493916756945389	5				NaN	NaN	0	NaN	4516	3518	8032
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8037	25.329	NaN	7453.8	30	0	1360.4	0.106	+			33000	REFGANDNM	9	64	527.2240796665931	1052.433606399986	2	527.22509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_REFGANDNM_	ENSG00000162896|ENST00000356495|PIGR	81.52500206392136	0.09095445986635249	5				NaN	NaN	0	NaN	4517	3518	8032
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8038	25.331	NaN	6021.1	30	0	2476.9	0.033	+			4288	ATGGTFVVK	9	65	440.25037695285636	878.4862009725127	2	440.2502746582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATGGTFVVK_	ENSG00000198208|ENST00000557413|RPS6KL1;ENST00000555834.5_1_14:75375979-75389943:-|nuORF;nc|ENSG00000198208|Q9Y6S9-2|RPS6KL1;nc|ENSG00000198208|Q9Y6S9-4|RPS6KL1	107.00750918261382	0.032051501805654005	5				NaN	NaN	0	NaN	4518	3518	8032
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8039	25.332	NaN	3275.8	30	0	592.96	0.14			+	36384	SETIMDNPE	9	66	518.2188044968731	1034.423056060546	2	518.2196655273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SETIMDNPE_	REV__ENSG00000120690|ENST00000239882|ELF1;REV__nc|ENSG00000120690|P32519-2|ELF1	42.396135135203025	0.392153681582562	5				NaN	NaN	0	NaN	4519	3518	8032
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8055	25.367	NaN	32836	30	0	4463.7	0.214	+			40013	STMSTNGIPR	10	89	532.2633882693241	1062.512223605448	2	532.2640380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STMSTNGIPR_	ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF	136.98908636845044	0.01155686115611441	5				NaN	NaN	0	NaN	4532	3521	8054
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8056	25.37	NaN	32875	30	0	5214.1	0.106	+			14260	GSSYPVCVSK	10	80	542.2603090304987	1082.5060651277972	2	542.260986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GSSYPVC(Carbamidomethyl (C))VSK_	ENSG00000089127|ENST00000202917|OAS1;ENST00000549820.1_1_12:113344820-113354315:+|nuORF;nc|ENSG00000089127|P00973-2|OAS1;nc|ENSG00000089127|P00973-3|OAS1;nc|ENSG00000089127|P00973-4|OAS1;OAS1|p.N280Tfs*8|1|0.07|ENSG00000089127|chr12:112916689-112916689|A/-|frameshift_variant	126.24258497203832	0.01851300475414303	5				NaN	NaN	0	NaN	4533	3521	8054
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8057	25.372	NaN	2314.9	30	0	329.43	0.106	+			38830	SSNDWNVEK	9	60	539.7435958158119	1077.4726386984237	2	539.7440795898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSNDWNVEK_	ENSG00000151348|ENST00000533608|EXT2;EXT2|p.D82Ifs*30|1|0.43|ENSG00000151348|chr11:44107951-44107951|G/-|frameshift_variant;EXT2|p.N517Tfs*3|1|0.49|ENSG00000151348|chr11:44206844-44206844|A/-|frameshift_variant;nc|ENSG00000151348|Q93063-2|EXT2;nc|ENSG00000151348|Q93063-3|EXT2	96.66504779109242	0.04607440320619715	5				NaN	NaN	0	NaN	4534	3521	8054
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8058	25.374	NaN	2254.6	30	0	600.43	0.106	+			26037	LSLHLLFMG	9	56	515.7925653017528	1029.5705776703055	2	515.7921752929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSLHLLFMG_	KANSL1|p.G179Efs*23|2|0.22|ENSG00000120071|chr17:46171608-46171608|C/-|frameshift_variant	35.200714571348534	0.47427825964483533	5				NaN	NaN	0	NaN	4535	3521	8054
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8059	25.376	NaN	3062.8	30	0	408.06	0.106	+			33227	RFSSKTVTV	9	60	512.7931570718802	1023.5717612105603	2	512.7933959960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RFSSKTVTV_	CHST5|p.L35I|1|0.13|ENSG00000135702|chr16:75530282-75530282|G/T|missense_variant;ENSG00000135702|ENST00000336257|CHST5;nc|ENSG00000135702|Q9GZS9-2|CHST5	34.172542307311794	0.4838870758800184	5				NaN	NaN	0	NaN	4536	3521	8054
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8060	25.378	NaN	3184	30	0	1701.6	0.033			+	44455	TSNKVPNL	8	46	436.7456911758605	871.476829418521	2	436.745849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TSNKVPNL_	REV__tr|U7STL4|U7STL4_FUSNUDUF452domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01103PE=4SV=1	31.954861631926434	0.7126016770032289	5				NaN	NaN	0	NaN	4537	3521	8054
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8061	25.378	NaN	1892.7	30	0	346.32	0.137			+	15505	GVASGVIVQ	9	49	415.24257489596357	828.4705968587272	2	415.2425537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GVASGVIVQ_	REV__nc|ENSG00000240268|A6NHM9|MOXD2P	47.91560031466742	0.327412564698279	5				NaN	NaN	0	NaN	4538	3521	8054
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8074	25.407	NaN	4004.6	30	0	889.53	0.214	+			37535	SLLSGALAGA	10	56	430.247754008588	858.480955083976	2	430.2475280761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLLSGALAGA_	ENSG00000181035|ENST00000318596|SLC25A42;ENST00000594070.5_1_19:19206777-19217195:+|nuORF;ENST00000600251.1_1_19:19212604-19215795:+|nuORF;ENST00000600275.1_1_19:19212604-19217139:+|nuORF	63.30626980617807	0.33577009411590547	5				NaN	NaN	0	NaN	4548	3524	8073
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8075	25.411	NaN	10054	30	0	1658.2	0.106	+			535	ADASAIALAL	10	63	458.2607199191186	914.5068869050373	2	458.2606201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ADASAIALAL_	ENSG00000019485|ENST00000683152|PRDM11	71.29570347882199	0.26673431503403816	5				NaN	NaN	0	NaN	4549	3524	8073
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8076	25.413	NaN	10474	30	0	1128.3	0.106	+			34699	RVTPFILKK	9	76	367.90965923470435	1100.707148304313	3	367.90948486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RVTPFILKK_	ENSG00000175768|ENST00000321301|TOMM5;ENST00000354833.7_1_5:70213930-70214023:+|nuORF	82.7504851949679	0.08565546331141553	5				NaN	NaN	0	NaN	4550	3524	8073
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8077	25.415	NaN	5067.9	30	0	769.79	0.106				-1	ATAELIMSR	9	68	504.26225801480734	1006.5099630964147	2	504.2625427246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_ATAELIM(Oxidation (M))SR_	ENSG00000105677|ENST00000222284|TMEM147;ENST00000477168.6_1_19:36036641-36037810:+|nuORF;ENST00000595467.1_1_19:36037522-36037810:+|nuORF;nc|ENSG00000105677|Q9BVK8-2|TMEM147	96.0336014099291	0.047854655524928534	5				NaN	NaN	0	NaN	4551	3524	8073
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8078	25.417	NaN	1534.2	30	0	279.76	0.106			+	29885	PLLEQEHE	8	61	497.74562912148133	993.4767053097627	2	497.7457275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PLLEQEHE_	REV__ENSG00000180773|ENST00000326402|SLC36A4;REV__ENST00000527743.1_1_11:92918855-92930998:-|nuORF;REV__SLC36A4|p.N453Ifs*4|1|0.19|ENSG00000180773|chr11:93148694-93148694|T/-|frameshift_variant	37.15910966729921	0.6739408393984688	5				NaN	NaN	0	NaN	4552	3524	8073
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8079	25.418	NaN	1969.3	30	0	208.77	0.106				-1	ALPGLQGCAE	10	64	508.2459223805717	1014.4772918279434	2	508.2452087402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_ALPGLQGC(Carbamidomethyl (C))AE_	ENSG00000114124|ENST00000682958|GRK7	37.15910966729921	0.575322462179216	5				NaN	NaN	0	NaN	4553	3524	8073
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8080	25.42	NaN	2088.8	30	0	211.39	0.036	+			51241	YQEKGVRVL	9	64	546.3143827183546	NaN	0	546.3143310546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YQEKGVRVL_	ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2	60.11826168202944	0.14881452885248947	5				NaN	NaN	0	NaN	4554	3524	8073
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8096	25.454	NaN	4433.8	30	0	662.21	0.214	+			20280	KENQVIVRM	9	73	558.8133858312988	1115.6122187293975	2	558.8135986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KENQVIVRM_	ENSG00000104413|ENST00000433389|ESRP1;ESRP1|p.L333Sfs*55|1|0.35|ENSG00000104413|chr8:94668009-94668009|G/-|frameshift_variant;ESRP1|p.N512Hfs*7|2|0.33|ENSG00000104413|chr8:94674383-94674384|AA/-|frameshift_variant;ESRP1|p.N512Kfs*8|1|0.48|ENSG00000104413|chr8:94674382-94674383|-/A|frameshift_variant;ESRP1|p.N512Tfs*2|2|0.36|ENSG00000104413|chr8:94674383-94674383|A/-|frameshift_variant;nc|ENSG00000104413|Q6NXG1-2|ESRP1;nc|ENSG00000104413|Q6NXG1-3|ESRP1;nc|ENSG00000104413|Q6NXG1-4|ESRP1;nc|ENSG00000104413|Q6NXG1-5|ESRP1	104.0567914643314	0.03506238181059741	5				NaN	NaN	0	NaN	4567	3527	8095
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8097	25.457	NaN	4015.8	30	0	491.77	0.106	+			6902	CLSKQPMAL	9	63	495.75755783809103	989.5005627429821	2	495.7586669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_CLSKQPMAL_	ENST00000254977.7_1_20:11903866-11903926:+|nuORF	54.776311868738084	0.25715957988447635	5				NaN	NaN	0	NaN	4568	3527	8095
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8098	25.459	NaN	3105.8	30	0	578.66	0.106	+			44013	TPKGKGRAAL	10	62	499.8089435645795	997.6033341959591	2	499.8089599609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TPKGKGRAAL_	E2F3|p.T177Nfs*4|1|0.31|ENSG00000112242|chr6:20481223-20481224|-/A|frameshift_variant;E2F3|p.T177Rfs*18|1|0.28|ENSG00000112242|chr6:20481224-20481224|A/-|frameshift_variant;ENSG00000112242|ENST00000346618|E2F3;nc|ENSG00000112242|O00716-2|E2F3	32.75053402867276	0.6123771875927935	5				NaN	NaN	0	NaN	4569	3527	8095
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8099	25.461	NaN	2935.2	30	0	388.61	0.106	+			45723	VAAVRFGAAL	10	67	487.79294824558673	973.5713435579735	2	487.79248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VAAVRFGAAL_	ENST00000554456.1_1_14:58711654-58711926:+|nuORF	47.91560031466742	0.4762067885998563	5				NaN	NaN	0	NaN	4570	3527	8095
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8100	25.463	NaN	5925.9	30	0	2039.3	0.106			+	19373	KALQHQIVT	9	66	519.3089937325323	1036.6034345318644	2	519.3086547851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KALQHQIVT_	REV__tr|U7SLP8|U7SLP8_FUSNUV-typeATPsynthasealphachainOS=FusobacteriumnucleatumCTI-5OX=1316586GN=atpAPE=3SV=1	69.6276240434122	0.14239879520340665	5				NaN	NaN	0	NaN	4571	3527	8095
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8101	25.465	NaN	1323.5	30	0	739.68	0.035			+	2166	ALLRQVWL	8	18	333.54159163100604	NaN	0	333.54150390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ALLRQVWL_	REV__GRPEL2|p.R12W|1|0.12|ENSG00000164284|chr5:149345573-149345573|C/T|missense_variant	35.200714571348534	1.7418937515398478	5				NaN	NaN	0	NaN	4572	3527	8095
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8102	25.465	NaN	1484.2	30	0	146.34	0.141	+			31361	QKCLKLLKK	9	59	551.3611945263215	1100.7078361194428	2	551.3622436523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QKCLKLLKK_	ENST00000589042.5_3_2:179517806-179527536:-|nuORF;ENST00000589042.5_3_2:179517806-179527536:-|nuORF;ENST00000589042.5_3_2:179517806-179527536:-|nuORF	49.536043120802724	0.308405419312776	5				NaN	NaN	0	NaN	4573	3527	8095
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8117	25.498	NaN	2045.2	30	0	997.58	0.214	+			31864	QPVKVRVSY	9	36	538.3172949226331	NaN	0	538.3173217773438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QPVKVRVSY_	ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1670Tfs*23|1|0.29|ENSG00000174231|chr17:1659487-1659487|C/-|frameshift_variant	21.68575002086885	0.36358557434667943	5				NaN	NaN	0	NaN	4585	3530	8116
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8118	25.501	NaN	1314.7	30	0	131.75	0.106	+			18800	ITSLHTLPT	9	53	491.7819464679329	981.5493400026659	2	491.7823486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ITSLHTLPT_	WDR6|p.N984T|1|0.12|ENSG00000178252|chr3:49014873-49014873|A/C|missense_variant	51.33545320467046	0.2872990594074956	5				NaN	NaN	0	NaN	4586	3530	8116
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8119	25.503	NaN	1426.8	30	0	436.59	0.106			+	33743	RPPPSRPA	8	43	439.2531171380789	NaN	0	439.2534484863281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RPPPSRPA_	REV__ENSG00000196313|ENST00000434423|POM121	21.9598887501803	1.7418937515398478	5				NaN	NaN	0	NaN	4587	3530	8116
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8120	25.505	NaN	1249.6	30	0	167.63	0.106	+			26884	LWPSLLHMH	9	43	567.3021551506854	1132.5897573681707	2	567.3027954101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LWPSLLHMH_	ZNF443|p.F207L|1|0.53|ENSG00000180855|chr19:12431553-12431553|A/G|missense_variant	33.51558372728122	0.4900267029546261	5				NaN	NaN	0	NaN	4588	3530	8116
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8121	25.507	NaN	2003.6	30	0	300.37	0.106	+			48391	VTIDSCVFIA	10	64	534.2776113226442	1066.5406697120884	2	534.7413330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTIDSCVFIA_	ENST00000590930.5_1_10:101953005-101953116:-|nuORF	36.446750945000026	0.5818864909973037	5				NaN	NaN	0	NaN	4589	3530	8116
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8122	25.509	NaN	1166.4	30	0	461.93	0.036	+			26228	LSSLPLTRTA	10	30	353.545166015625	NaN	0	353.545166015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSSLPLTRTA_	ENST00000262958.3_1_19:3163029-3163218:+|nuORF	20.94693142431847	0.4201028297492154	5				NaN	NaN	0	NaN	4590	3530	8116
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8133	25.532	NaN	2594.6	30	0	722.07	0.144	+			868	AEHERELAL	9	62	534.2776113226442	1066.5406697120884	2	534.2782592773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEHERELAL_	ENSG00000115306|ENST00000356805|SPTBN1;ENSG00000173898|ENST00000533211|SPTBN2;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1;nc|ENSG00000173898|O15020-2|SPTBN2;SPTBN1|p.K503Rfs*24|1|0.06|ENSG00000115306|chr2:54626095-54626095|G/-|frameshift_variant;SPTBN2|p.P924Qfs*35|1|0.39|ENSG00000173898|chr11:66701629-66701629|G/-|frameshift_variant	61.76455937419982	0.19890525308472518	5				NaN	NaN	0	NaN	4598	3533	8132
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8143	25.556	NaN	2261.8	30	0	213.72	0.214	+			40796	SVDRYLSI	8	53	476.7585981372215	951.502643341243	2	476.7583312988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVDRYLSI_	ENSG00000144476|ENST00000272928|ACKR3;ENSG00000165370|ENST00000651716|GPR101;GPR101|p.S141Vfs*36|1|0.29|ENSG00000165370|chrX:137031255-137031256|-/G|frameshift_variant	32.81241826257853	0.7059802730411993	5				NaN	NaN	0	NaN	4605	3536	8142
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8144	25.56	NaN	1921.3	30	0	305.07	0.106			+	33844	RRERCLWTK	9	67	624.3405054330909	1246.6664579329818	2	624.3402099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RRERCLWTK_	REV__ENST00000482556.5_1_20:47241774-47241945:-|nuORF	52.936696900407355	0.27249468807391813	5				NaN	NaN	0	NaN	4606	3536	8142
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8145	25.562	NaN	1474.4	30	0	224.89	0.106				-1	GLACEAVN	8	42	417.194822658989	NaN	0	417.194580078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_GLAC(Carbamidomethyl (C))EAVN_	DNAJC13|p.I2113V|1|0.45|ENSG00000138246|chr3:132526237-132526237|A/G|missense_variant	31.954861631926434	1.7418937515398478	5				NaN	NaN	0	NaN	4607	3536	8142
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8146	25.564	NaN	1172	30	0	161.64	0.106	+			13963	GSANLPLAK	9	41	435.7555310136661	NaN	0	435.7548828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GSANLPLAK_	ACE|p.I462Lfs*63|2|0.27|ENSG00000159640|chr17:63483065-63483065|A/-|frameshift_variant;ACE|p.M457Wfs*68|1|0.41|ENSG00000159640|chr17:63483051-63483051|A/-|frameshift_variant;ACE|p.P1103Qfs*69|1|0.14|ENSG00000159640|chr17:63494393-63494393|C/-|frameshift_variant;ACE|p.S903Rfs*9|1|0.07|ENSG00000159640|chr17:63491014-63491014|C/-|frameshift_variant;ENSG00000159640|ENST00000290866|ACE;nc|ENSG00000159640|P12821-2|ACE	54.776311868738084	0.17377682019723872	5				NaN	NaN	0	NaN	4608	3536	8142
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8147	25.565	NaN	2533.7	30	0	1220.4	0.037	+			13929	GRREERPDSG	10	57	579.7856543331274	1157.5567557330546	2	579.7843017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GRREERPDSG_	ENST00000318291.4_1_12:752314-752692:+|nuORF	28.081489160057373	0.6505064946289502	5				NaN	NaN	0	NaN	4609	3536	8142
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8159	25.591	NaN	2266	30	0	263.17	0.214			+	6979	CPVLGCMQY	9	60	535.7256469726562	NaN	0	535.7256469726562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_CPVLGC(Carbamidomethyl (C))MQY_	REV__tr|U7STY1|U7STY1_FUSNUCobyrinatea,c-diamidesynthaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=cbiAPE=3SV=1	52.29916861842294	0.1908481487866478	5				NaN	NaN	0	NaN	4618	3539	8158
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8160	25.594	NaN	3110.2	30	0	502.49	0.106			+	-1	ACFGTSITI	9	62	485.2409669505274	968.4673809678549	2	485.2406311035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_AC(Carbamidomethyl (C))FGTSITI_	REV__ENSG00000128271|ENST00000337539|ADORA2A	53.351449002276354	0.2690372970092375	5				NaN	NaN	0	NaN	4619	3539	8158
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8161	25.596	NaN	2906.5	30	0	561.2	0.106	+			779	AEFAERSVA	9	51	490.24597327200047	978.477393610801	2	490.24609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEFAERSVA_	CON__Q3SX28;ENSG00000143549|ENST00000651641|TPM3;ENSG00000198467|ENST00000645482|TPM2;ENST00000397772.2_1_20:32500135-32500381:-|nuORF;ENST00000469717.5_1_1:154130117-154143232:-|nuORF;ENST00000600996.1_1_19:42012510-42012810:+|nuORF;nc|ENSG00000143549|P06753-2|TPM3;nc|ENSG00000143549|P06753-3|TPM3;nc|ENSG00000143549|P06753-4|TPM3;nc|ENSG00000143549|P06753-5|TPM3;nc|ENSG00000143549|P06753-6|TPM3;nc|ENSG00000143549|P06753-7|TPM3;nc|ENSG00000198467|P07951-2|TPM2;nc|ENSG00000198467|P07951-3|TPM2;TPM3|p.R239H|1|0.1|ENSG00000143549|chr1:154170459-154170459|C/T|missense_variant	75.65223720490533	0.11634833104049533	5				NaN	NaN	0	NaN	4620	3539	8158
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8162	25.598	NaN	806.51	30	0	72.819	0.106			+	6628	AYSLYLVNPM	10	39	585.7948608398438	NaN	0	585.7948608398438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AYSLYLVNPM_	REV__ENST00000263708.6_1_2:120737192-120737405:+|nuORF	27.047317107675042	0.41136583337917604	5				NaN	NaN	0	NaN	4621	3539	8158
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8163	25.6	NaN	2036.7	30	0	226.62	0.106				-1	IGSTCPWLK	9	64	531.2770400008378	1060.5395270684755	2	531.2780151367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_IGSTC(Carbamidomethyl (C))PWLK_	ENSG00000106927|ENST00000265132|AMBP;ENST00000540645.5_1_9:116823569-116838999:-|nuORF	64.20726635412375	0.17854274437659667	5				NaN	NaN	0	NaN	4622	3539	8158
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8164	25.602	NaN	2439	30	0	523.08	0.106	+			15107	GTQPGPLLK	9	56	455.7713702714022	909.5281876096044	2	455.771240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTQPGPLLK_	ENSG00000123243|ENST00000397146|ITIH5;ENST00000476417.5_1_10:7615057-7659255:-|nuORF;ENST00000492668.5_1_10:7611547-7618533:-|nuORF;ITIH5|p.L690*|1|0.49|ENSG00000123243|chr10:7569749-7569749|G/-|frameshift_variant;nc|ENSG00000123243|Q86UX2-2|ITIH5;nc|ENSG00000123243|Q86UX2-3|ITIH5;nc|ENSG00000123243|Q86UX2-4|ITIH5;nc|ENSG00000123243|Q86UX2|ITIH5	56.72105179125745	0.24094814563026265	5				NaN	NaN	0	NaN	4623	3539	8158
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8165	25.604	NaN	1886.1	30	0	163.67	0.036			+	28687	NMDGPLPATPA	11	54	542.2603090304987	1082.5060651277972	2	541.8139038085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NMDGPLPATPA_	REV__sp|P08318|PP150_HCMVALargestructuralphosphoproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL32PE=1SV=1;REV__sp|Q6SW99|PP150_HCMVMTegumentproteinpp150OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL32PE=3SV=1	42.86426827375447	0.5187511139693657	5				NaN	NaN	0	NaN	4624	3539	8158
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8176	25.629	NaN	5890.6	30	0	630.87	0.214	+			28138	NAKDVSVSY	9	71	491.74657040796865	981.4785878827373	2	491.74615478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAKDVSVSY_	ENSG00000173597|ENST00000310613|SULT1B1;SULT1B1|p.L192Cfs*6|2|0.23|ENSG00000173597|chr4:69733435-69733435|A/-|frameshift_variant	75.04331003522576	0.118981335847003	5				NaN	NaN	0	NaN	4632	3542	8175
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8177	25.632	NaN	2539.3	30	0	829.22	0.106	+			42692	TCTAAHPEL	9	54	471.7211320142742	941.4277110953484	2	471.7217102050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TCTAAHPEL_	nc|ENSG00000211890|P01877-1|IGHA2;nc|ENSG00000211890|P01877|IGHA2	79.45101966838831	0.09992237243120712	5				NaN	NaN	0	NaN	4633	3542	8175
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8178	25.634	NaN	822.58	30	0	76.117	0.106			+	26761	LVPQEQHPCE	10	44	590.2768194899585	NaN	0	590.279052734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LVPQEQHPCE_	REV__ENST00000376804.2_2_1:11334013-11354999:+|nuORF	27.882242232435846	0.4086243523356342	5				NaN	NaN	0	NaN	4634	3542	8175
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8179	25.636	NaN	1464.1	30	0	116.89	0.034			+	16301	HEHLVLKV	8	47	487.79294824558673	973.5713435579735	2	487.79290771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HEHLVLKV_	REV__ENST00000396128.8_1_14:45398158-45398206:-|nuORF	25.450171626174864	0.7628259754767981	5				NaN	NaN	0	NaN	4635	3542	8175
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8192	25.664	NaN	18140	30	0	2217.6	0.214	+			23054	KVTEGSFVYK	10	81	579.3136414133988	1156.6127298935976	2	579.314697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVTEGSFVYK_	ENSG00000057608|ENST00000380191|GDI2;GDI2|p.S222Afs*20|1|0.1|ENSG00000057608|chr10:5785197-5785197|T/-|frameshift_variant	166.0711670676379	0.0049346292030699205	5				NaN	NaN	0	NaN	4645	3545	8191
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8193	25.667	NaN	9449.1	30	0	1137.7	0.106	+			47789	VSIEAGSAVGK	11	70	509.282290927747	1016.550028922294	2	509.2831726074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSIEAGSAVGK_	ENSG00000176945|ENST00000447234|MUC20;ENST00000457750.1_1_3:195341833-195346985:+|nuORF;nc|ENSG00000176945|Q8N307-3|MUC20	196.51786170233515	3.562770718765675E-08	5				NaN	NaN	0	NaN	4646	3545	8191
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8194	25.669	NaN	3834.2	30	0	493.81	0.106	+			1208	AEQIKHIL	8	63	476.2847197947281	950.5548866562563	2	476.2852783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEQIKHIL_	ENSG00000133112|ENST00000530705|TPT1;ENST00000458298.1_1_6:86137181-86137394:-|nuORF;ENST00000490277.1_1_13:45913571-45913754:-|nuORF;nc|ENSG00000133112|P13693-2|TPT1	82.30502934623384	0.30436709589983096	5				NaN	NaN	0	NaN	4647	3545	8191
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8195	25.671	NaN	4447.2	30	0	551.4	0.106	+			43036	TEKVSKISL	9	61	502.8029821037761	1003.5914112743523	2	502.80328369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TEKVSKISL_	ENSG00000054523|ENST00000676179|KIF1B;ENSG00000130294|ENST00000498729|KIF1A;KIF1A|p.N1306Kfs*14|1|0.46|ENSG00000130294|chr2:240725306-240725307|-/T|frameshift_variant;KIF1A|p.R782Afs*30|1|0.33|ENSG00000130294|chr2:240760738-240760738|G/-|frameshift_variant;KIF1B|p.N365Mfs*8|1|0.32|ENSG00000054523|chr1:10278037-10278037|C/-|frameshift_variant;nc|ENSG00000054523|O60333-2|KIF1B;nc|ENSG00000054523|O60333-3|KIF1B;nc|ENSG00000054523|O60333-4|KIF1B;nc|ENSG00000130294|Q12756-2|KIF1A;nc|ENSG00000130294|Q12756|KIF1A	84.81729255234993	0.07947707105691067	5				NaN	NaN	0	NaN	4648	3545	8191
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8196	25.673	NaN	3344.4	30	0	389.22	0.106			+	8512	EATKWKAL	8	64	473.7717830789462	945.5290132246924	2	473.7716979980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EATKWKAL_	REV__ENSG00000174231|ENST00000304992|PRPF8	53.351449002276354	0.5676011784961348	5				NaN	NaN	0	NaN	4649	3545	8191
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8197	25.675	NaN	2991.7	30	0	710.98	0.106	+			17439	IAVGKGSSL	9	56	416.2501924693219	830.4858320054439	2	416.25054931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IAVGKGSSL_	ENSG00000142871|ENST00000451137|CCN1	56.72105179125745	0.24094814563026265	5				NaN	NaN	0	NaN	4650	3545	8191
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8198	25.676	NaN	2551.6	30	0	362.79	0.035	+			39172	SSYLNTVQK	9	60	520.2748792033988	1038.5352054735974	2	520.275634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSYLNTVQK_	ENSG00000179454|ENST00000396128|KLHL28	74.1650062923329	0.12277912660386392	5				NaN	NaN	0	NaN	4651	3545	8191
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8216	25.714	NaN	7034	30	0	1355.8	0.214	+			40442	STVNKWTLK	9	68	538.8084819794473	1075.6024110256944	2	538.808837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STVNKWTLK_	ENSG00000114742|ENST00000302313|WDR48;nc|ENSG00000114742|Q8TAF3-3|WDR48;nc|ENSG00000114742|Q8TAF3-4|WDR48	214.05248081000585	3.6573848263212416E-08	5				NaN	NaN	0	NaN	4666	3548	8215
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8217	25.717	NaN	5214.8	30	0	1080.2	0.106	+			40084	STNSFALNK	9	74	491.25262864176483	980.4907043503297	2	491.2533264160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STNSFALNK_	BPTF|p.D2844Afs*20|1|0.08|ENSG00000171634|chr17:67959766-67959767|-/C|frameshift_variant;BPTF|p.K2718Nfs*36|3|0.12|ENSG00000171634|chr17:67948150-67948150|A/-|frameshift_variant;ENSG00000171634|ENST00000306378|BPTF;ENST00000579209.1_1_17:62758032-62758825:-|nuORF;nc|ENSG00000171634|Q12830-4|BPTF;nc|ENSG00000171634|Q12830|BPTF	76.16968421966216	0.11411088698345859	5				NaN	NaN	0	NaN	4667	3548	8215
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8218	25.719	NaN	4564.1	30	0	718.37	0.106			+	29151	NVGCDMAL	8	63	440.188463574146	878.362374215092	2	440.1883544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_NVGC(Carbamidomethyl (C))DMAL_	REV__ENSG00000165140|ENST00000375326|FBP1;REV__FBP1|p.G294Efs*11|1|0.11|ENSG00000165140|chr9:94603517-94603517|C/-|frameshift_variant	63.30626980617807	0.4690498839812213	5				NaN	NaN	0	NaN	4668	3548	8215
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8219	25.721	NaN	2479.2	30	0	239.01	0.106	+			46364	VEKSVNEVM	9	60	517.7627117575236	1033.510870581847	2	517.7636108398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VEKSVNEVM_	ENSG00000120694|ENST00000320027|HSPH1;nc|ENSG00000120694|Q92598-2|HSPH1;nc|ENSG00000120694|Q92598-3|HSPH1;nc|ENSG00000120694|Q92598-4|HSPH1	66.96192283764107	0.15557981141143568	5				NaN	NaN	0	NaN	4669	3548	8215
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8220	25.723	NaN	3481.4	30	0	589.04	0.106	+			19931	KEFEGKTLV	9	71	525.7947375677875	1049.5749222023749	2	525.7955322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEFEGKTLV_	ENSG00000080824|ENST00000216281|HSP90AA1;ENST00000378770.1_1_4:190394307-190396341:+|nuORF;ENST00000530115.1_1_11:27910903-27911533:-|nuORF;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000205100|Q58FG1|HSP90AA4P	85.86182877749512	0.07653218437724067	5				NaN	NaN	0	NaN	4670	3548	8215
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8221	25.725	NaN	1872.9	30	0	576.88	0.035			+	8536	EAVGVSVLAR	10	36	334.19745951314013	999.5705491396204	3	334.1974792480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EAVGVSVLAR_	REV__ENST00000360031.6_2_20:25176439-25187192:+|nuORF	34.172542307311794	0.6007644933930345	5				NaN	NaN	0	NaN	4671	3548	8215
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8222	25.725	NaN	1889	30	0	367.84	0.137			+	15616	GVKLPVNG	8	46	392.2396319966572	NaN	0	392.23968505859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GVKLPVNG_	REV__ENSG00000169551|ENST00000276241|CT55;REV__nc|ENSG00000169551|Q8WUE5-2|CT55	42.47446043378293	1.7418937515398478	5				NaN	NaN	0	NaN	4672	3548	8215
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8238	25.76	NaN	36678	30	0	10391	0.214	+			41851	SVSTVLTSK	9	70	461.2660735355207	920.5175941378415	2	461.2659606933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSTVLTSK_	ENSG00000188536|ENST00000251595|HBA2;ENSG00000206172|ENST00000320868|HBA1;HBA1|p.A131T|1|0.07|ENSG00000206172|chr16:177373-177373|G/A|missense_variant	104.01359247289065	0.03510646158778409	5				NaN	NaN	0	NaN	4685	3551	8237
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8239	25.764	NaN	7191.5	30	0	1024.8	0.106	+			1764	AIANFTNQK	9	67	503.76941108746615	1005.5242692417323	2	503.7695007324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AIANFTNQK_	ENSG00000138756|ENST00000502613|BMP2K;nc|ENSG00000138756|Q9NSY1-2|BMP2K;nc|ENSG00000138756|Q9NSY1-3|BMP2K	158.07458414430337	0.004987072822166904	5				NaN	NaN	0	NaN	4686	3551	8237
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8240	25.766	NaN	4013.1	30	0	829.94	0.106	+			46940	VIYNEQMASK	10	73	591.7947036761125	1181.5748544190249	2	591.7947387695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VIYNEQMASK_	ENSG00000185432|ENST00000332160|METTL7A	159.33581866081465	0.006837894036646432	5				NaN	NaN	0	NaN	4687	3551	8237
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8241	25.768	NaN	1395.1	30	0	155.33	0.106	+			18235	INRIFHEH	8	62	533.2847445803396	1064.5549362274792	2	533.28515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_INRIFHEH_	DNM3|p.R369H|1|0.34|ENSG00000197959|chr1:172042122-172042122|G/A|missense_variant	40.5726180659479	0.6527593143185008	5				NaN	NaN	0	NaN	4688	3551	8237
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8242	25.77	NaN	2784.9	30	0	565.19	0.106	+			26166	LSRAEAAGL	9	58	444.25088825942953	886.4872235856591	2	444.250732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSRAEAAGL_	ENSG00000142207|ENST00000382751|URB1	45.97224482568171	0.3502073465782774	5				NaN	NaN	0	NaN	4689	3551	8237
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8243	25.771	NaN	2049.1	30	0	271.15	0.106			+	15488	GVAKAFKE	8	49	425.24513275273154	848.4757125722631	2	425.2449645996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GVAKAFKE_	REV__ENSG00000139687|ENST00000267163|RB1;REV__RB1|p.L561Mfs*9|1|0.07|ENSG00000139687|chr13:48381428-48381432|CCTTG/-|frameshift_variant;REV__RB1|p.V654Cfs*4|1|0.33|ENSG00000139687|chr13:48456343-48456343|A/-|frameshift_variant;REV__RB1|p.Y529*|1|0.23|ENSG00000139687|chr13:48381334-48381335|AC/-|frameshift_variant;REV__RB1|p.Y529Tfs*3|1|0.08|ENSG00000139687|chr13:48381329-48381329|T/-|frameshift_variant	68.484700416344	0.4195245774506064	5				NaN	NaN	0	NaN	4690	3551	8237
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8244	25.773	NaN	1421.4	30	0	127.17	0.034	+			23927	LDPAKTLAE	9	55	479.2673303007872	NaN	0	479.2680969238281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LDPAKTLAE_	ENSG00000129595|ENST00000261486|EPB41L4A;ENST00000305368.8_1_5:111600591-111754802:-|nuORF	35.61828744233558	0.29773779453147337	5				NaN	NaN	0	NaN	4691	3551	8237
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8256	25.799	NaN	8112.9	30	0	711.61	0.214	+			12155	GAIKVFVNK	9	73	488.3027451098634	NaN	0	488.30255126953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GAIKVFVNK_	ENSG00000131725|ENST00000254029|WDR44;nc|ENSG00000131725|Q5JSH3-2|WDR44;nc|ENSG00000131725|Q5JSH3-4|WDR44;WDR44|p.F898L|1|0.26|ENSG00000131725|chrX:118448939-118448939|C/A|missense_variant	104.74654710444128	0.014441433212055448	5				NaN	NaN	0	NaN	4700	3554	8255
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8257	25.802	NaN	2530.5	30	0	246.9	0.106			+	21552	KNVEEQVNI	9	63	536.7855834960938	NaN	0	536.7855834960938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KNVEEQVNI_	REV__tr|U7SND9|U7SND9_FUSNUSH3bdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01809PE=4SV=1	65.46538089061403	0.1260090208616529	5				NaN	NaN	0	NaN	4701	3554	8255
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8258	25.804	NaN	1976.8	30	0	184.99	0.106			+	40425	STVIHLPSK	9	60	491.28955078125	NaN	0	491.28955078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STVIHLPSK_	REV__tr|U7SRF4|U7SRF4_FUSNUGlycosyltransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01644PE=4SV=1	39.252832667884924	0.27938773122138094	5				NaN	NaN	0	NaN	4702	3554	8255
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8259	25.806	NaN	733.05	30	0	73.874	0.106	+			26193	LSRTPAAE	8	44	422.72991943359375	NaN	0	422.72991943359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSRTPAAE_	ENSG00000171246|ENST00000306773|NPTX1;NPTX1|p.R192Gfs*14|1|0.11|ENSG00000171246|chr17:80475590-80475590|G/-|frameshift_variant	37.15910966729921	1.7418937515398478	5				NaN	NaN	0	NaN	4703	3554	8255
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8260	25.808	NaN	4234.2	30	0	1290.3	0.106	+			32525	QVQVVLNQK	9	64	528.3146540085008	NaN	0	528.3150024414062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QVQVVLNQK_	ENSG00000140688|ENST00000327237|RUSF1;ENST00000568491.1_1_16:31502158-31504599:-|nuORF;nc|ENSG00000140688|Q96GQ5-2|RUSF1	90.77665401227738	0.04003078172695098	5				NaN	NaN	0	NaN	4704	3554	8255
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8261	25.81	NaN	1667.6	30	0	359.11	0.035	+			23589	LAMPGEDLK	9	60	495.2506103515625	NaN	0	495.2506103515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_LAM(Oxidation (M))PGEDLK_	ENSG00000178952|ENST00000313511|TUFM;ENST00000569217.1_1_16:28854298-28855510:-|nuORF	68.484700416344	0.11313159791952428	5				NaN	NaN	0	NaN	4705	3554	8255
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8273	25.926	NaN	24030	30	0	5459.2	0.214	+			14980	GTMTGMLYK	9	70	509.2405349388841	1016.4665169445682	2	509.2410583496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_GTM(Oxidation (M))TGMLYK_	ENSG00000178440|ENST00000651763|TIMM23B-AGAP6;ENSG00000204152|ENST00000651259|TIMM23B;ENSG00000265354|ENST00000580018|TIMM23;nc|ENSG00000204152|Q5SRD1-2|TIMM23B	143.8867514904718	0.008656634767784652	5				NaN	NaN	0	NaN	4714	3557	8272
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8274	25.93	NaN	18643	30	0	7490.9	0.106			+	44482	TSRRWGAY	8	77	498.7526983881165	995.4908438430331	2	499.2513732910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TSRRWGAY_	REV__MXRA5|p.Q2683Kfs*44|1|0.34|ENSG00000101825|chrX:3310156-3310156|G/-|frameshift_variant	83.28718786952967	0.2977916691876266	5				NaN	NaN	0	NaN	4715	3557	8272
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8275	25.932	NaN	7265.7	30	0	2132.7	0.106	+			3951	ATATGTEILK	10	68	502.7843342884388	1003.5541156436776	2	502.7845458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATATGTEILK_	ENSG00000159593|ENST00000290810|NAE1;ENST00000562757.5_1_16:66857380-66864856:-|nuORF;ENST00000563419.5_1_16:66858748-66864862:-|nuORF;ENST00000564040.6_1_16:66857135-66864856:-|nuORF;ENST00000569963.1_1_16:66860370-66864856:-|nuORF;nc|ENSG00000159593|Q13564-2|NAE1;nc|ENSG00000159593|Q13564-4|NAE1	129.42129120953632	0.014023551377083414	5				NaN	NaN	0	NaN	4716	3557	8272
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8276	25.933	NaN	9406.2	30	0	3669.2	0.106			+	-1	DFIKMVAASI	10	56	370.8669410105281	1109.5789936317842	3	370.8667907714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_DFIKM(Oxidation (M))VAASI_	REV__ENSG00000166411|ENST00000299518|IDH3A;REV__ENST00000559889.5_1_15:78449787-78454580:+|nuORF;REV__IDH3A|p.L308Ffs*6|1|0.05|ENSG00000166411|chr15:78166206-78166207|-/TT|frameshift_variant;REV__IDH3A|p.L309Gfs*5|1|0.04|ENSG00000166411|chr15:78166208-78166209|-/GG|frameshift_variant	40.05817265558897	0.5486090488315611	5				NaN	NaN	0	NaN	4717	3557	8272
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8277	25.935	NaN	3618.2	30	0	389.82	0.106	+			49920	VYVDKVEKM	9	60	555.7962859572982	1109.5780189813963	2	555.797119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VYVDKVEKM_	AMOT|p.L850Cfs*59|1|0.13|ENSG00000126016|chrX:112779606-112779606|G/-|frameshift_variant;ENSG00000126016|ENST00000371959|AMOT;nc|ENSG00000126016|Q4VCS5-2|AMOT	104.01359247289065	0.03510646158778409	5				NaN	NaN	0	NaN	4718	3557	8272
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8278	25.937	NaN	14611	30	0	3965	0.039			+	39763	STIVEKQPPLK	11	58	413.91496507414263	1238.7230658226279	3	413.9149169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STIVEKQPPLK_	REV__ENSG00000143409|ENST00000683666|MINDY1;REV__nc|ENSG00000143409|Q8N5J2-2|MINDY1;REV__nc|ENSG00000143409|Q8N5J2-3|MINDY1;REV__nc|ENSG00000143409|Q8N5J2-4|MINDY1	37.50817390946774	0.5920388381045607	5				NaN	NaN	0	NaN	4719	3557	8272
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8279	25.938	NaN	3134.3	30	0	650.87	0.138	+			38065	SPSNKDAAL	9	56	451.732256024711	901.449959116222	2	451.73236083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SPSNKDAAL_	CLPB|p.L339Wfs*5|1|0.11|ENSG00000162129|chr11:72317169-72317169|G/-|frameshift_variant;ENSG00000162129|ENST00000538039|CLPB;ENST00000542555.1_1_11:72140095-72145182:-|nuORF;nc|ENSG00000162129|Q9H078-3|CLPB;nc|ENSG00000162129|Q9H078|CLPB	37.81151784470057	0.4459294069877048	5				NaN	NaN	0	NaN	4720	3557	8272
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8297	25.977	NaN	30466	30	0	16410	0.214	+			30623	QASDVSVKY	9	80	498.7526983881165	995.4908438430331	2	498.7532653808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QASDVSVKY_	ENSG00000047410|ENST00000367478|TPR;nc|ENSG00000047410|P12270-2|TPR;TPR|p.E1141Dfs*29|1|0.08|ENSG00000047410|chr1:186344085-186344086|-/CAGGTAAA|frameshift_variant;TPR|p.G216Rfs*3|1|0.34|ENSG00000047410|chr1:186362887-186362888|-/T|frameshift_variant;TPR|p.P2083Qfs*3|1|0.31|ENSG00000047410|chr1:186323735-186323735|G/-|frameshift_variant;TPR|p.T2133Lfs*63|1|0.03|ENSG00000047410|chr1:186322382-186322383|-/GTACTAATAAG|frameshift_variant;TPR|p.V1142Efs*26|1|0.08|ENSG00000047410|chr1:186344083-186344084|-/TT|frameshift_variant	129.42129120953632	0.01549634589885217	5				NaN	NaN	0	NaN	4735	3560	8296
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8298	25.981	NaN	7982.6	30	0	951.77	0.106	+			40405	STVGAGAYAYK	11	65	544.2742710263761	1086.5339891195522	2	544.2747802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STVGAGAYAYK_	ENSG00000156709|ENST00000287295|AIFM1;nc|ENSG00000156709|O95831-4|AIFM1	124.08010499294276	0.012337848868221223	5				NaN	NaN	0	NaN	4736	3560	8296
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8299	25.982	NaN	9246	30	0	1331.5	0.106	+			35340	SAPASQASL	9	61	416.21386786081143	830.4131827884229	2	416.2137756347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAPASQASL_	ENSG00000137497|ENST00000393695|NUMA1;ENST00000540626.5_1_11:71714575-71718510:-|nuORF;nc|ENSG00000137497|Q14980-2|NUMA1;nc|ENSG00000137497|Q14980-5|NUMA1	107.00750918261382	0.032051501805654005	5				NaN	NaN	0	NaN	4737	3560	8296
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8300	25.984	NaN	4656.7	30	0	1366.6	0.106	+			2241	ALSTPVVEK	9	55	472.2767428745579	942.5389328159158	2	472.27618408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ALSTPVVEK_	ENSG00000197265|ENST00000355904|GTF2E2	47.657333605630114	0.33044192980041115	5				NaN	NaN	0	NaN	4738	3560	8296
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8301	25.986	NaN	2951	30	0	389.53	0.106	+			24719	LHNELLLS	8	62	469.7687943618207	NaN	0	469.7686767578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LHNELLLS_	ENSG00000277399|ENST00000616987|GPR179;GPR179|p.A580T|1|0.18|ENSG00000277399|chr17:38334750-38334750|C/T|missense_variant;GPR179|p.K1289Rfs*12|1|0.29|ENSG00000277399|chr17:38329703-38329703|T/-|frameshift_variant;GPR179|p.L1200Afs*38|1|0.36|ENSG00000277399|chr17:38329971-38329972|-/C|frameshift_variant;GPR179|p.R1290Efs*59|1|0.25|ENSG00000277399|chr17:38329702-38329703|-/T|frameshift_variant;nc|ENSG00000277399|Q6PRD1|GPR179	63.30626980617807	1.7418937515398478	5				NaN	NaN	0	NaN	4739	3560	8296
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8302	25.988	NaN	4363	30	0	384.18	0.034	+			34992	SAASEQHVF	9	70	488.2298153077488	NaN	0	488.2299499511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SAASEQHVF_	DHX38|p.A739Pfs*17|1|0.38|ENSG00000140829|chr16:72105086-72105086|G/-|frameshift_variant;DHX38|p.G603Efs*22|1|0.36|ENSG00000140829|chr16:72103767-72103767|G/-|frameshift_variant;DHX38|p.G697Wfs*16|1|0.38|ENSG00000140829|chr16:72104557-72104558|-/T|frameshift_variant;ENSG00000140829|ENST00000268482|DHX38;nc|ENSG00000140829|Q92620-2|DHX38	72.87924865735499	0.09578366712754152	5				NaN	NaN	0	NaN	4740	3560	8296
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8303	25.988	NaN	951.23	30	0	92.967	0.141				-1	KTNSSTCYY	9	47	562.2383422851562	NaN	0	562.2383422851562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_KTNSSTC(Carbamidomethyl (C))YY_	ENST00000380191.8_1_10:5807916-5807982:-|nuORF	37.15910966729921	0.2899585034171616	5				NaN	NaN	0	NaN	4741	3560	8296
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8319	26.024	NaN	5176.4	30	0	677.02	0.214	+			4417	ATIEEAYSR	9	59	520.2561745305293	1038.4977961278585	2	520.2565307617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATIEEAYSR_	ENSG00000157107|ENST00000430046|FCHO2;nc|ENSG00000157107|Q0JRZ9-2|FCHO2;nc|ENSG00000157107|Q0JRZ9-3|FCHO2	129.42129120953632	0.01549634589885217	5				NaN	NaN	0	NaN	4754	3563	8318
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8320	26.027	NaN	12582	30	0	1419.1	0.106	+			45756	VAEENTRVL	9	66	515.7800252392359	NaN	0	515.7804565429688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VAEENTRVL_	ENSG00000156256|ENST00000399976|USP16;ENST00000485067.1_1_21:30426080-30426505:+|nuORF;nc|ENSG00000156256|Q9Y5T5-2|USP16;nc|ENSG00000156256|Q9Y5T5-3|USP16;nc|ENSG00000156256|Q9Y5T5-4|USP16	104.01359247289065	0.015103351932921906	5				NaN	NaN	0	NaN	4755	3563	8318
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8321	26.029	NaN	2783.5	30	0	632.47	0.106	+			27208	MEHAMETM	8	50	490.18754107743314	978.3605292216663	2	490.1874694824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MEHAMETM_	ENSG00000197747|ENST00000368811|S100A10;ENST00000478348.1_1_1:151957748-151958706:-|nuORF;ENST00000478574.5_1_1:151956596-151958706:-|nuORF	68.484700416344	0.4195245774506064	5				NaN	NaN	0	NaN	4756	3563	8318
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8322	26.031	NaN	2454.5	30	0	1164.1	0.106			+	21157	KKVEIEKLI	9	58	550.3581022944621	1098.7016516557242	2	550.3585815429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KKVEIEKLI_	REV__ENSG00000100296|ENST00000490103|THOC5;REV__ENST00000358079.8_1_22:29924947-29938918:-|nuORF;REV__ENST00000475187.5_1_22:29932576-29945100:-|nuORF;REV__ENST00000488052.1_1_22:29927628-29932726:-|nuORF	31.529811441608018	0.5085848003137583	5				NaN	NaN	0	NaN	4757	3563	8318
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8323	26.033	NaN	2731.6	30	0	435.81	0.106	+			28211	NAVAGAVKY	9	56	446.74778863788106	891.4810243425621	2	446.7479248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NAVAGAVKY_	ENSG00000030066|ENST00000378460|NUP160;ENST00000529863.1_1_11:47861610-47869870:-|nuORF;nc|ENSG00000030066|Q12769-2|NUP160;nc|ENSG00000030066|Q12769|NUP160	74.25504064058377	0.12238981753128622	5				NaN	NaN	0	NaN	4758	3563	8318
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8324	26.034	NaN	1508.8	30	0	137.91	0.034	+			614	ADSNPPPLL	9	50	462.24521919159577	922.4758854499916	2	462.2449645996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ADSNPPPLL_	ENSG00000105695|ENST00000392213|MAG;nc|ENSG00000105695|P20916-2|MAG;nc|ENSG00000105695|P20916-3|MAG	47.657333605630114	0.33044192980041115	5				NaN	NaN	0	NaN	4759	3563	8318
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8325	26.035	NaN	1295.6	30	0	173.29	0.139			+	10035	ESAKVTLDA	9	50	467.2482144075332	932.4818758818665	2	467.24810791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ESAKVTLDA_	REV__ENSG00000086967|ENST00000357701|MYBPC2;REV__MYBPC2|p.K668Efs*24|1|0.33|ENSG00000086967|chr19:50454350-50454351|-/G|frameshift_variant;REV__MYBPC2|p.P573Lfs*7|1|0.26|ENSG00000086967|chr19:50451968-50451968|C/-|frameshift_variant	29.14955571784316	0.5308295550522326	5				NaN	NaN	0	NaN	4760	3563	8318
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8337	26.062	NaN	11664	30	0	2326.3	0.214	+			39182	SSYPVCVSK	9	67	485.2390562791583	968.4635596251167	2	485.23876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSYPVCVSK_	ENSG00000089127|ENST00000202917|OAS1;ENST00000549820.1_1_12:113344820-113354315:+|nuORF;nc|ENSG00000089127|P00973-2|OAS1;nc|ENSG00000089127|P00973-3|OAS1;nc|ENSG00000089127|P00973-4|OAS1;OAS1|p.N280Tfs*8|1|0.07|ENSG00000089127|chr12:112916689-112916689|A/-|frameshift_variant	78.26377905018397	0.10505600812668463	5				NaN	NaN	0	NaN	4769	3566	8336
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8338	26.066	NaN	4265.9	30	0	891.23	0.106			+	34650	RVQKPGDL	8	53	456.7665553060311	911.5185576788622	2	456.76654052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RVQKPGDL_	REV__ENST00000586585.1_1_18:32953773-32954277:-|nuORF	58.78195531508484	0.5138399468736706	5				NaN	NaN	0	NaN	4770	3566	8336
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8339	26.068	NaN	2033.7	30	0	646.14	0.106				-1	SVRCAKRRG	9	43	363.8730163574219	NaN	0	363.8730163574219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SVRC(Carbamidomethyl (C))AKRRG_	ENSG00000147465|ENST00000276449|STAR;ENST00000520114.1_1_8:38003479-38005900:-|nuORF	31.529811441608018	0.3183796599642538	5				NaN	NaN	0	NaN	4771	3566	8336
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8340	26.07	NaN	1056	30	0	93.674	0.106			+	38944	SSQQLSDD	8	47	440.188463574146	878.362374215092	2	440.1880798339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSQQLSDD_	REV__BIRC6|p.K3585Sfs*8|1|0.32|ENSG00000115760|chr2:32515171-32515171|A/-|frameshift_variant;REV__BIRC6|p.S2648Ffs*25|1|0.08|ENSG00000115760|chr2:32487769-32487770|-/T|frameshift_variant;REV__BIRC6|p.S3504Mfs*5|1|0.15|ENSG00000115760|chr2:32513095-32513098|TAGT/-|frameshift_variant;REV__ENSG00000115760|ENST00000421745|BIRC6	37.15910966729921	0.6739408393984688	5				NaN	NaN	0	NaN	4772	3566	8336
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8341	26.071	NaN	991.26	30	0	347.7	0.106			+	-1	ARCRVQIVI	9	48	557.8272705078125	NaN	0	557.8272705078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_ARC(Carbamidomethyl (C))RVQIVI_	REV__ASPM|p.I3229Nfs*2|1|0.48|ENSG00000066279|chr1:197090339-197090340|-/T|frameshift_variant;REV__ASPM|p.M2261*|1|0.44|ENSG00000066279|chr1:197102470-197102470|T/-|frameshift_variant;REV__ASPM|p.Q2620Nfs*22|1|0.15|ENSG00000066279|chr1:197101393-197101394|-/TT|frameshift_variant;REV__ASPM|p.Q2620Tfs*17|1|0.19|ENSG00000066279|chr1:197101393-197101394|-/T|frameshift_variant;REV__ENSG00000066279|ENST00000367409|ASPM	38.80614096846853	0.28164298475537564	5				NaN	NaN	0	NaN	4773	3566	8336
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8342	26.073	NaN	1073.5	30	0	85.429	0.036			+	26678	LVGPFQHPW	9	50	540.7847290039062	NaN	0	540.7847290039062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LVGPFQHPW_	REV__ENST00000564777.5_1_15:74281135-74282785:-|nuORF;REV__ENST00000566081.5_1_15:74281506-74284576:-|nuORF	35.200714571348534	0.2998460331538257	5				NaN	NaN	0	NaN	4774	3566	8336
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8343	26.074	NaN	1287.7	30	0	470.42	0.139			+	37751	SLVAMHAK	8	35	428.7397529699115	855.464953006623	2	428.7398986816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SLVAMHAK_	REV__ENSG00000152409|ENST00000396137|JMY;REV__nc|ENSG00000152409|Q8N9B5-2|JMY	23.04248740728303	0.7814162927298575	5				NaN	NaN	0	NaN	4775	3566	8336
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8356	26.103	NaN	26063	30	0	3897	0.214	+			48504	VTNDGATILK	10	78	516.2903470325072	NaN	0	516.29052734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTNDGATILK_	ENSG00000166226|ENST00000299300|CCT2;ENST00000546859.5_1_12:69979244-69981900:+|nuORF;ENST00000550455.5_1_12:69979244-69981425:+|nuORF;ENST00000550638.5_1_12:69979244-69982049:+|nuORF;ENST00000551620.5_1_12:69979244-69983508:+|nuORF;nc|ENSG00000166226|P78371-2|CCT2	164.6633220568051	3.5688171953445292E-06	5				NaN	NaN	0	NaN	4785	3569	8355
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8357	26.106	NaN	2173.7	30	0	137.62	0.106				-1	 	0	61	530.2777528981102	529.2704764315101	1	530.2783813476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4786	3569	8355
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8358	26.108	NaN	2591	30	0	624.96	0.106	+			32555	QVTSQILQK	9	56	522.8071890933533	NaN	0	522.8087768554688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QVTSQILQK_	ENSG00000167674|ENST00000616600|HDGFL2;nc|ENSG00000167674|Q7Z4V5-2|HDGFL2;nc|ENSG00000167674|Q7Z4V5-3|HDGFL2;nc|ENSG00000167674|Q7Z4V5-4|HDGFL2	65.46538089061403	0.1260090208616529	5				NaN	NaN	0	NaN	4787	3569	8355
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8359	26.11	NaN	1274	30	0	214.63	0.106			+	50349	WVKGLVGAQ	9	50	479.27734518549545	956.5401374377909	2	479.27764892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_WVKGLVGAQ_	REV__ENST00000490622.5_1_19:35988327-35991112:-|nuORF	44.116797842482775	0.37197099687881774	5				NaN	NaN	0	NaN	4788	3569	8355
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8360	26.112	NaN	2007	30	0	173.94	0.106	+			18774	ITQEMQTLK	9	63	546.2921865711164	1090.5698202090327	2	546.7943725585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ITQEMQTLK_	ENSG00000104133|ENST00000261866|SPG11;nc|ENSG00000104133|Q96JI7-2|SPG11;nc|ENSG00000104133|Q96JI7-3|SPG11	74.1650062923329	0.12277912660386392	5				NaN	NaN	0	NaN	4789	3569	8355
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8361	26.114	NaN	5965.9	30	0	3847	0.106	+			48167	VSYVRKVLQ	9	37	364.5573053631182	1090.6500866895547	3	364.557373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VSYVRKVLQ_	ENSG00000164961|ENST00000318410|WASHC5	34.172542307311794	0.4838870758800184	5				NaN	NaN	0	NaN	4790	3569	8355
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8362	26.116	NaN	1049.8	30	0	123.34	0.038			+	-1	GRIVMVSGMAY	11	44	608.2965287825169	NaN	0	608.297119140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Oxidation (M)	_GRIVM(Oxidation (M))VSGM(Oxidation (M))AY_	REV__BSND|p.G47R|1|0.33|ENSG00000162399|chr1:54999325-54999325|G/A|missense_variant	24.519189625965996	0.45614437233802635	5				NaN	NaN	0	NaN	4791	3569	8355
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8375	26.143	NaN	21534	30	0	7130.4	0.214	+			15485	GVAGGSILK	9	73	401.24508245549714	800.4756119777943	2	401.24517822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVAGGSILK_	EIF2S3|p.I441Nfs*4|1|0.29|ENSG00000130741|chrX:24073223-24073224|-/A|frameshift_variant;ENSG00000130741|ENST00000253039|EIF2S3;ENSG00000180574|ENST00000538173|EIF2S3B;nc|ENSG00000180574|Q2VIR3-2|EIF2S3B	122.1759843771914	0.019882474861609503	5				NaN	NaN	0	NaN	4801	3572	8374
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8376	26.147	NaN	4224.3	30	0	471.05	0.106			+	-1	VQCRMIPF	8	72	505.25150188474896	1008.488450836298	2	505.251708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_VQCRM(Oxidation (M))IPF_	REV__ENST00000418326.3_1_7:47853098-47859192:+|nuORF	52.29916861842294	0.578018602984656	5				NaN	NaN	0	NaN	4802	3572	8374
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8377	26.149	NaN	8922.1	30	0	966.84	0.106	+			45586	TYNQKHSLF	9	80	569.28765422228	1136.56075551136	2	569.288330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TYNQKHSLF_	ENSG00000165175|ENST00000614558|MID1IP1	109.47833844074708	0.029530294723441826	5				NaN	NaN	0	NaN	4803	3572	8374
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8378	26.15	NaN	19334	30	0	4002.8	0.106				-1	ISAFLVPMPM	10	77	379.861050415379	1136.561321846337	3	379.8611145019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Oxidation (M)	_ISAFLVPM(Oxidation (M))PM(Oxidation (M))_	ACADS|p.T219M|1|0.18|ENSG00000122971|chr12:120738311-120738311|C/T|missense_variant	35.15202426646627	0.5927656479315102	5				NaN	NaN	0	NaN	4804	3572	8374
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8379	26.152	NaN	2439.5	30	0	196.12	0.106	+			37635	SLQIKRELA	9	64	529.3230128397804	NaN	0	529.3232421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SLQIKRELA_	ENSG00000178177|ENST00000635767|LCORL	51.19269402634007	0.19847346126499396	5				NaN	NaN	0	NaN	4805	3572	8374
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8380	26.154	NaN	2482.4	30	0	333.95	0.034	+			12627	GEIGTKTTL	9	58	460.2582132399108	918.5018735466216	2	460.2582092285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GEIGTKTTL_	ENSG00000175792|ENST00000322623|RUVBL1	38.753607047826485	0.4348790777924195	5				NaN	NaN	0	NaN	4806	3572	8374
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8381	26.155	NaN	691.65	30	0	66.712	0.141			+	9265	EGYVSDAEKK	10	38	563.2763061523438	NaN	0	563.2763061523438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EGYVSDAEKK_	REV__ENSG00000159140|ENST00000356577|SON;REV__nc|ENSG00000159140|P18583-10|SON;REV__nc|ENSG00000159140|P18583-2|SON;REV__nc|ENSG00000159140|P18583-3|SON;REV__nc|ENSG00000159140|P18583-4|SON;REV__nc|ENSG00000159140|P18583-5|SON;REV__nc|ENSG00000159140|P18583-7|SON;REV__nc|ENSG00000159140|P18583-9|SON	29.170058357718403	0.40439580130713204	5				NaN	NaN	0	NaN	4807	3572	8374
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8397	26.189	NaN	5368.9	30	0	723.4	0.214	+			35582	SAYGSVKAY	9	64	473.23730091802014	944.4600489028403	2	473.2369079589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAYGSVKAY_	ENSG00000182718|ENST00000451270|ANXA2;ENST00000557937.5_1_15:60655071-60678274:-|nuORF;nc|ENSG00000182718|P07355-2|ANXA2;nc|ENSG00000231991|A6NMY6|ANXA2P2;NPTN-ANXA2|1|fusion	96.0336014099291	0.047854655524928534	5				NaN	NaN	0	NaN	4820	3575	8396
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8398	26.193	NaN	5721.2	30	0	964.62	0.106	+			2468	APLKSKMIY	9	69	525.8041095194508	1049.5936661057015	2	525.8048706054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_APLKSKMIY_	ENSG00000125868|ENST00000246069|DSTN;ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65623104-65623215:-|nuORF;ENST00000602547.1_1_12:6994092-6994545:+|nuORF;nc|ENSG00000125868|P60981-2|DSTN;nc|ENSG00000165410|Q9Y281-3|CFL2	75.04331003522576	0.118981335847003	5				NaN	NaN	0	NaN	4821	3575	8396
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8399	26.195	NaN	1400.2	30	0	133.5	0.036			+	29048	NTEKLLRGY	9	64	547.3039435187746	1092.5933341043492	2	547.3036499023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NTEKLLRGY_	REV__ENSG00000179542|ENST00000356928|SLITRK4	45.97224482568171	0.3502073465782774	5				NaN	NaN	0	NaN	4822	3575	8396
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8414	26.226	NaN	17300	30	0	5929.8	0.214	+			4331	ATGLSGLTK	9	72	424.24772613747297	846.480899341746	2	424.2475891113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATGLSGLTK_	ENSG00000165949|ENST00000612813|IFI27;nc|ENSG00000165949|P40305-1|IFI27;nc|ENSG00000165949|P40305-3|IFI27;nc|ENSG00000165949|P40305-4|IFI27	154.1183686248401	0.005909203230691971	5				NaN	NaN	0	NaN	4834	3578	8413
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8415	26.23	NaN	13193	30	0	3070.8	0.106	+			2469	APLKSKMIY	9	56	350.87189253901784	1049.5938482172535	3	350.8719177246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_APLKSKMIY_	ENSG00000125868|ENST00000246069|DSTN;ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65623104-65623215:-|nuORF;ENST00000602547.1_1_12:6994092-6994545:+|nuORF;nc|ENSG00000125868|P60981-2|DSTN;nc|ENSG00000165410|Q9Y281-3|CFL2	38.80614096846853	0.43426287593479557	5				NaN	NaN	0	NaN	4835	3578	8413
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8416	26.232	NaN	6486.1	30	0	995.59	0.106	+			47355	VPEEGGATHVY	11	81	579.7750094522646	1157.5354659713291	2	579.7753295898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VPEEGGATHVY_	ENSG00000166452|ENST00000309377|AKIP1;nc|ENSG00000166452|Q9NQ31-2|AKIP1;nc|ENSG00000166452|Q9NQ31-3|AKIP1	134.81075121484326	0.000920617503852976	5				NaN	NaN	0	NaN	4836	3578	8413
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8417	26.234	NaN	4971.8	30	0	1076.7	0.106	+			6306	AVSTLGISK	9	62	438.26341020768825	874.5122674821765	2	438.26318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVSTLGISK_	ENSG00000103160|ENST00000219439|HSDL1;nc|ENSG00000103160|Q3SXM5-2|HSDL1	80.45461616416974	0.09558281504443908	5				NaN	NaN	0	NaN	4837	3578	8413
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8418	26.235	NaN	5912.5	30	0	1724.7	0.106	+			14256	GSSYPVCVSK	10	55	513.7495904145378	1025.4846278958755	2	513.7499389648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GSSYPVCVSK_	ENSG00000089127|ENST00000202917|OAS1;ENST00000549820.1_1_12:113344820-113354315:+|nuORF;nc|ENSG00000089127|P00973-2|OAS1;nc|ENSG00000089127|P00973-3|OAS1;nc|ENSG00000089127|P00973-4|OAS1;OAS1|p.N280Tfs*8|1|0.07|ENSG00000089127|chr12:112916689-112916689|A/-|frameshift_variant	68.84614121027924	0.2867470276772903	5				NaN	NaN	0	NaN	4838	3578	8413
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8419	26.237	NaN	2372.9	30	0	425.05	0.034	+			41451	SVNLTAPQGA	10	58	479.2536015660107	956.4926501988214	2	479.253173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVNLTAPQGA_	ENST00000374165.5_1_9:116172982-116173105:+|nuORF	45.02220120713402	0.5028680121232791	5				NaN	NaN	0	NaN	4839	3578	8413
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8420	26.238	NaN	2462.4	30	0	807.12	0.143	+			14293	GSVYITLKK	9	37	336.8743995235886	1007.6013691709658	3	336.8744201660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GSVYITLKK_	ENSG00000140319|ENST00000267884|SRP14;ENST00000558243.1_1_15:40330963-40331317:-|nuORF;ENST00000558527.5_1_15:40329525-40331317:-|nuORF;ENST00000559475.5_1_15:40329218-40331146:-|nuORF	30.317721548370564	0.5199124245378496	5				NaN	NaN	0	NaN	4840	3578	8413
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8434	26.269	NaN	4901	30	0	1317.2	0.214	+			785	AEFAERTVA	9	59	497.25329603965315	992.4920391461063	2	497.2535095214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEFAERTVA_	ENSG00000167460|ENST00000643579|TPM4;ENST00000368528.3_1_3:27674554-27675208:+|nuORF;ENST00000520239.1_1_8:70042334-70042577:+|nuORF;nc|ENSG00000167460|P67936-2|TPM4	56.43379154798735	0.2433427591689151	5				NaN	NaN	0	NaN	4851	3581	8433
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8435	26.273	NaN	4467.5	30	0	648.49	0.106			+	22984	KVSAQGKQY	9	60	504.7771832252082	1007.5398135172164	2	504.7772216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVSAQGKQY_	REV__ENSG00000010219|ENST00000543431|DYRK4;REV__nc|ENSG00000010219|Q9NR20-2|DYRK4;REV__nc|ENSG00000010219|Q9NR20-3|DYRK4;REV__nc|ENSG00000010219|Q9NR20-4|DYRK4;REV__nc|ENSG00000010219|Q9NR20-5|DYRK4;REV__nc|ENSG00000010219|Q9NR20|DYRK4	71.87747018426188	0.13267044672804276	5				NaN	NaN	0	NaN	4852	3581	8433
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8436	26.275	NaN	3718.7	30	0	822.17	0.106			+	-1	TSIICMVAQ	9	62	519.7517133490032	1037.4888737648064	2	519.7516479492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_TSIIC(Carbamidomethyl (C))M(Oxidation (M))VAQ_	REV__ENSG00000086758|ENST00000262854|HUWE1;REV__nc|ENSG00000086758|Q7Z6Z7-2|HUWE1;REV__nc|ENSG00000086758|Q7Z6Z7-3|HUWE1	45.9519527083369	0.35044536499095585	5				NaN	NaN	0	NaN	4853	3581	8433
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8437	26.277	NaN	2002.4	30	0	365.68	0.106	+			44385	TSLGYQVGK	9	59	476.758293885193	NaN	0	476.7581787109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TSLGYQVGK_	ENSG00000130803|ENST00000247956|ZNF317;ENST00000590152.1_1_19:9267931-9272106:+|nuORF;nc|ENSG00000130803|Q96PQ6-4|ZNF317;ZNF317|p.E359Rfs*51|1|0.42|ENSG00000130803|chr19:9160716-9160716|G/-|frameshift_variant;ZNF317|p.L487Pfs*6|1|0.3|ENSG00000130803|chr19:9161101-9161104|TATT/-|frameshift_variant	79.71258880314673	0.07236858429579222	5				NaN	NaN	0	NaN	4854	3581	8433
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8438	26.279	NaN	2684.5	30	0	241.89	0.106	+			23416	LAATWLLD	8	63	451.7535692565352	901.4925855798704	2	452.25836181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LAATWLLD_	ENST00000301463.8_1_12:53469542-53469590:-|nuORF	35.200714571348534	0.6875396545722289	5				NaN	NaN	0	NaN	4855	3581	8433
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8439	26.28	NaN	2594.4	30	0	556.21	0.035				-1	GTMTGMLYK	9	61	509.2405349388841	1016.4665169445682	2	509.24066162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_GTM(Oxidation (M))TGMLYK_	ENSG00000178440|ENST00000651763|TIMM23B-AGAP6;ENSG00000204152|ENST00000651259|TIMM23B;ENSG00000265354|ENST00000580018|TIMM23;nc|ENSG00000204152|Q5SRD1-2|TIMM23B	39.252832667884924	0.4290233611298554	5				NaN	NaN	0	NaN	4856	3581	8433
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8440	26.281	NaN	1909.1	30	0	188.49	0.14			+	9088	EGINGFEVL	9	58	489.2484163848794	976.4822798365589	2	489.2489929199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EGINGFEVL_	REV__ENSG00000277481|ENST00000620267|PKD1L3	45.97224482568171	0.3502073465782774	5				NaN	NaN	0	NaN	4857	3581	8433
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8454	26.312	NaN	5432	30	0	855.23	0.214	+			41425	SVNGKTVTL	9	61	459.7663058764422	917.5180588196844	2	459.7662658691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVNGKTVTL_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	45.02220120713402	0.3613509778819777	5				NaN	NaN	0	NaN	4868	3584	8453
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8455	26.316	NaN	3793.8	30	0	1381.6	0.106				-1	QMEQPTLAF	9	72	540.753021151349	1079.491489369498	2	540.7540893554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_QM(Oxidation (M))EQPTLAF_	ENSG00000152034|ENST00000281806|MCHR2	47.657333605630114	0.33044192980041115	5				NaN	NaN	0	NaN	4869	3584	8453
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8456	26.318	NaN	3835.5	30	0	707.03	0.106	+			35088	SAFSTSISK	9	50	464.2426842306129	926.4708155280258	2	464.2423095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAFSTSISK_	ENSG00000179115|ENST00000314606|FARSA;ENST00000592662.5_1_19:13039347-13044510:-|nuORF	63.53385203322761	0.18415635464017938	5				NaN	NaN	0	NaN	4870	3584	8453
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8457	26.32	NaN	3725.2	30	0	1138.8	0.106	+			40599	SVAGLSVTK	9	59	431.25588124034664	860.4972095474933	2	431.2554931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVAGLSVTK_	ENSG00000197841|ENST00000492450|ZNF181;ZNF181|p.K248Sfs*36|1|0.29|ENSG00000197841|chr19:34741122-34741125|CAAA/-|frameshift_variant;ZNF181|p.V107Lfs*2|1|0.15|ENSG00000197841|chr19:34740695-34740695|A/-|frameshift_variant;ZNF181|p.Y52H|1|0.07|ENSG00000197841|chr19:34739546-34739546|T/C|missense_variant	41.42661286455405	0.403525789677298	5				NaN	NaN	0	NaN	4871	3584	8453
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8458	26.322	NaN	1226.9	30	0	403.25	0.106			+	-1	LMKVGHPHCS	10	42	562.770741728169	1123.526930523138	2	562.7716064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_LM(Oxidation (M))KVGHPHCS_	REV__ENSG00000164327|ENST00000357387|RICTOR;REV__nc|ENSG00000164327|Q6R327-3|RICTOR;REV__RICTOR|p.K678Nfs*14|1|0.2|ENSG00000164327|chr5:38959796-38959796|T/-|frameshift_variant;REV__RICTOR|p.S1495Pfs*13|1|0.05|ENSG00000164327|chr5:38945642-38945643|-/ATTCTGGG|frameshift_variant	26.69291269510374	0.6618461711292317	5				NaN	NaN	0	NaN	4872	3584	8453
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8459	26.323	NaN	3095.3	30	0	384.81	0.036			+	-1	LSKKLISME	9	63	532.8029004856708	1063.5912480381414	2	532.8038940429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_LSKKLISM(Oxidation (M))E_	REV__CCNB3|p.T485Hfs*37|1|0.28|ENSG00000147082|chrX:50309615-50309616|-/C|frameshift_variant;REV__ENSG00000147082|ENST00000376042|CCNB3	93.19546047674547	0.05585629608842056	5				NaN	NaN	0	NaN	4873	3584	8453
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8460	26.324	NaN	888.08	30	0	204.18	0.144			+	31622	QMEPAGGRPP	10	34	347.1709899902344	NaN	0	347.1709899902344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QMEPAGGRPP_	REV__ENST00000326153.9_1_X:224107-229437:-|nuORF	18.531049691330335	0.4201028297492154	5				NaN	NaN	0	NaN	4874	3584	8453
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8478	26.363	NaN	3653.7	30	0	461.41	0.214	+			37417	SLGLSRPLSV	10	63	514.808260897285	1027.6019688613699	2	514.80810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLGLSRPLSV_	ENST00000259371.6_1_9:124546048-124546174:+|nuORF	37.59989570853033	0.5712608395912122	5				NaN	NaN	0	NaN	4889	3587	8477
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8479	26.367	NaN	3295.8	30	0	861.7	0.106	+			47847	VSLDNTVLG	9	69	459.2501508479474	916.4857487626948	2	459.25048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSLDNTVLG_	TFR2|p.A510T|1|0.1|ENSG00000106327|chr7:100628082-100628082|C/T|missense_variant	37.81151784470057	0.4459294069877048	5				NaN	NaN	0	NaN	4890	3587	8477
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8480	26.369	NaN	2960.8	30	0	573.25	0.106	+			26628	LVALQAQAEP	10	60	520.2925982263788	1038.5706435195575	2	520.7945556640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LVALQAQAEP_	ENSG00000206047|ENST00000382692|DEFA1;ENSG00000239839|ENST00000327857|DEFA3;ENSG00000240247|ENST00000382689|DEFA1B	68.78682469695295	0.28723163847957256	5				NaN	NaN	0	NaN	4891	3587	8477
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8481	26.371	NaN	2441.3	30	0	259.26	0.106	+			11711	FSAESSRSL	9	56	492.2432226087469	982.4718922842939	2	492.2428894042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FSAESSRSL_	DOCK7|p.F1836Dfs*12|1|0.05|ENSG00000116641|chr1:62477795-62477796|-/TGTC|frameshift_variant;ENSG00000116641|ENST00000635253|DOCK7;nc|ENSG00000116641|Q96N67-2|DOCK7;nc|ENSG00000116641|Q96N67-3|DOCK7;nc|ENSG00000116641|Q96N67-4|DOCK7;nc|ENSG00000116641|Q96N67-5|DOCK7;nc|ENSG00000116641|Q96N67-6|DOCK7	91.26522074875469	0.06129826844580791	5				NaN	NaN	0	NaN	4892	3587	8477
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8482	26.372	NaN	3187.9	30	0	614.32	0.106	+			11415	FLRDAVETR	9	64	553.8013548191891	1105.588156705178	2	553.8018798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FLRDAVETR_	ENSG00000088682|ENST00000262507|COQ9	37.81151784470057	0.4459294069877048	5				NaN	NaN	0	NaN	4893	3587	8477
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8483	26.374	NaN	2035.8	30	0	178.62	0.036	+			7277	DANRQISEY	9	61	548.2569480385243	1094.4993431438486	2	548.25732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DANRQISEY_	ENSG00000093167|ENST00000336686|LRRFIP2;ENST00000496479.5_1_3:37095344-37107514:-|nuORF;LRRFIP2|p.V671Sfs*2|1|0.12|ENSG00000093167|chr3:37054455-37054456|-/T|frameshift_variant;nc|ENSG00000093167|Q9Y608-2|LRRFIP2;nc|ENSG00000093167|Q9Y608-3|LRRFIP2;nc|ENSG00000093167|Q9Y608-4|LRRFIP2;nc|ENSG00000093167|Q9Y608-5|LRRFIP2	77.31757898189308	0.1091473830098891	5				NaN	NaN	0	NaN	4894	3587	8477
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8484	26.375	NaN	999.39	30	0	157.22	0.14			+	-1	SLGKKGYCV	9	55	506.26827171476396	NaN	0	506.2535400390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_SLGKKGYC(Carbamidomethyl (C))V_	REV__ENST00000303115.7_1_5:35874625-35876091:+|nuORF	26.79610172149135	0.34227917631780574	5				NaN	NaN	0	NaN	4895	3587	8477
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8498	26.406	NaN	2088	30	0	328.12	0.214	+			35148	SAIASTKVM	9	53	454.24927554725474	NaN	0	454.249267578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAIASTKVM_	ENSG00000104442|ENST00000276569|ARMC1;nc|ENSG00000104442|Q9NVT9-2|ARMC1	40.05817265558897	0.275207446262312	5				NaN	NaN	0	NaN	4906	3590	8497
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8499	26.41	NaN	2172.6	30	0	216.44	0.106	+			24169	LENIELNK	8	61	486.77168520924783	NaN	0	486.771484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LENIELNK_	ENSG00000100129|ENST00000652021|EIF3L;nc|ENSG00000100129|Q9Y262-2|EIF3L	82.24051045832904	1.7418937515398478	5				NaN	NaN	0	NaN	4907	3590	8497
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8500	26.412	NaN	2171.2	30	0	216.3	0.106	+			50317	WTETRGIQF	9	55	569.28765422228	1136.56075551136	2	569.7879638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_WTETRGIQF_	CHST10|p.R229W|1|0.79|ENSG00000115526|chr2:100393631-100393631|G/A|missense_variant	29.14955571784316	0.5308295550522326	5				NaN	NaN	0	NaN	4908	3590	8497
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8501	26.414	NaN	2188.4	30	0	573.87	0.106			+	-1	IVLCALLLNQ	10	37	381.2281494140625	NaN	0	381.2281494140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))IVLCALLLNQ_	REV__ENSG00000169902|ENST00000304842|TPST1;REV__TPST1|p.F162Lfs*3|1|0.44|ENSG00000169902|chr7:66240908-66240908|T/-|frameshift_variant;REV__TPST1|p.K6T|1|0.25|ENSG00000169902|chr7:66240442-66240442|A/C|missense_variant	31.954861631926434	0.3952518850925832	5				NaN	NaN	0	NaN	4909	3590	8497
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8502	26.415	NaN	3013.5	30	0	1033.6	0.106	+			40185	STQTALTLK	9	54	481.77886382255906	961.5431747119181	2	481.7800598144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STQTALTLK_	ENSG00000172123|ENST00000304905|SLFN12;SLFN12|p.V491Cfs*4|1|0.28|ENSG00000172123|chr17:35411605-35411605|T/-|frameshift_variant	81.52500206392136	0.09095445986635249	5				NaN	NaN	0	NaN	4910	3590	8497
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8503	26.417	NaN	1666.2	30	0	258.17	0.035			+	37602	SLPPSPPAAY	10	60	500.25886253900126	NaN	0	500.2586975097656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLPPSPPAAY_	REV__ECM1|p.P169Lfs*9|1|0.16|ENSG00000143369|chr1:150510991-150510991|C/-|frameshift_variant;REV__ENSG00000143369|ENST00000369047|ECM1;REV__ENST00000470432.5_1_1:150480640-150482267:+|nuORF;REV__nc|ENSG00000143369|Q16610-2|ECM1;REV__nc|ENSG00000143369|Q16610-4|ECM1	44.116797842482775	0.3427969396372342	5				NaN	NaN	0	NaN	4911	3590	8497
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8504	26.418	NaN	21210	30	0	16356	0.138				-1	 	0	51	322.1935812844998	642.3726096357997	2	322.19366455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4912	3590	8497
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8518	26.449	NaN	2779.7	30	0	335.54	0.214	+			12743	GELAIKDANA	10	62	501.2663666058301	1000.5181802784602	2	501.2660827636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GELAIKDANA_	CON__H-INV:HIT000292931;CON__P05787;CON__REFSEQ:XP_092267;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;ENST00000547031.5_1_12:53292389-53294972:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	60.1669710687717	0.3643216362415131	5				NaN	NaN	0	NaN	4923	3593	8517
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8519	26.453	NaN	1278.7	30	0	166.65	0.106			+	31466	QKVLLSEGGSL	11	54	565.8248535462965	NaN	0	565.8248291015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QKVLLSEGGSL_	REV__ENSG00000090372|ENST00000263280|STRN4;REV__nc|ENSG00000090372|Q9NRL3-2|STRN4;REV__nc|ENSG00000090372|Q9NRL3-3|STRN4;REV__STRN4|p.Q379Sfs*19|1|0.38|ENSG00000090372|chr19:46727912-46727912|G/-|frameshift_variant	39.873155843976775	0.387718248623866	5				NaN	NaN	0	NaN	4924	3593	8517
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8520	26.455	NaN	2451.2	30	0	433.53	0.106			+	26004	LSKQPTFVN	9	63	517.288001621243	1032.5614503092859	2	517.2879028320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSKQPTFVN_	REV__ENSG00000107643|ENST00000374189|MAPK8;REV__ENST00000476134.1_1_10:49609691-49618268:+|nuORF;REV__MAPK8|p.N205Tfs*45|1|0.07|ENSG00000107643|chr10:48420315-48420315|A/-|frameshift_variant;REV__nc|ENSG00000107643|P45983-2|MAPK8;REV__nc|ENSG00000107643|P45983-3|MAPK8;REV__nc|ENSG00000107643|P45983-4|MAPK8;REV__nc|ENSG00000107643|P45983-5|MAPK8	45.02220120713402	0.3613509778819777	5				NaN	NaN	0	NaN	4925	3593	8517
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8521	26.457	NaN	2908	30	0	801.92	0.106	+			1235	AEREIVRDI	9	62	550.806525108214	1099.598497283228	2	550.8071899414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEREIVRDI_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196604|ENST00000409914|POTEF;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2	38.753607047826485	0.4348790777924195	5				NaN	NaN	0	NaN	4926	3593	8517
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8522	26.458	NaN	3965.9	30	0	792.41	0.106	+			47262	VMSLPDKL	8	63	451.7535692565352	901.4925855798704	2	451.7503662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VMSLPDKL_	tr|U7T2V0|U7T2V0_FUSNUABCtransporterATP-bindingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00468PE=4SV=1	45.9519527083369	0.6193794311207887	5				NaN	NaN	0	NaN	4927	3593	8517
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8523	26.46	NaN	7294.9	30	0	2039.4	0.039			+	-1	LSLIMLVFGFS	11	51	414.8981187333046	1241.672526800114	3	414.8981018066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_LSLIM(Oxidation (M))LVFGFS_	REV__ENST00000413279.1_1_2:136268294-136268516:-|nuORF	30.568863376406313	0.6691487505135859	5				NaN	NaN	0	NaN	4928	3593	8517
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8524	26.461	NaN	1174.6	30	0	92.636	0.139	+			34218	RTEPPETGP	9	52	492.2432226087469	982.4718922842939	2	492.7437744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RTEPPETGP_	ENST00000488559.6_1_9:130943037-130953136:-|nuORF	35.61828744233558	0.47037581924408073	5				NaN	NaN	0	NaN	4929	3593	8517
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8536	26.488	NaN	2116.9	30	0	333.5	0.214	+			38937	SSQNFTLTK	9	55	513.266657018565	1024.5187611039298	2	513.266357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSQNFTLTK_	CCNJL|p.V393Rfs*8|1|0.23|ENSG00000135083|chr5:160253509-160253510|-/G|frameshift_variant;ENSG00000135083|ENST00000257536|CCNJL;ENST00000377503.6_1_5:159681329-159707642:-|nuORF;nc|ENSG00000135083|Q8IV13|CCNJL	65.15724298150197	0.17062369902793603	5				NaN	NaN	0	NaN	4938	3596	8535
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8537	26.492	NaN	4866.7	30	0	1085.3	0.106	+			22240	KTAEDAKDFFK	11	48	433.89101917045343	1298.6512281115604	3	433.8907470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTAEDAKDFFK_	ENSG00000123349|ENST00000334478|PFDN5;ENST00000552341.5_1_12:53691573-53693126:+|nuORF;ENST00000553171.1_1_12:53691669-53691972:+|nuORF;nc|ENSG00000123349|Q99471-3|PFDN5	49.536043120802724	0.4274608637932522	5				NaN	NaN	0	NaN	4939	3596	8535
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8538	26.494	NaN	4792.2	30	0	740.43	0.106	+			992	AEKKIEVVM	9	66	523.7987927815773	1045.5830326299545	2	523.7996215820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEKKIEVVM_	ENSG00000075539|ENST00000358350|FRYL;ENST00000302806.5_1_4:48621203-48655803:-|nuORF;FRYL|p.K2264Qfs*11|1|0.13|ENSG00000075539|chr4:48531269-48531270|-/G|frameshift_variant;FRYL|p.L330*|1|0.33|ENSG00000075539|chr4:48602066-48602066|A/-|frameshift_variant;FRYL|p.L330Ffs*3|1|0.35|ENSG00000075539|chr4:48602065-48602066|-/A|frameshift_variant;FRYL|p.P2464Efs*13|1|0.04|ENSG00000075539|chr4:48523032-48523033|-/TATACAATTC|frameshift_variant	75.04331003522576	0.118981335847003	5				NaN	NaN	0	NaN	4940	3596	8535
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8539	26.496	NaN	1763.5	30	0	337.58	0.106	+			44879	TTVLSGINF	9	55	476.2605612358563	950.5065695385126	2	476.2623596191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TTVLSGINF_	CELSR2-KIAA1324|1|fusion;ENSG00000116299|ENST00000369939|ELAPOR1;ENST00000369936.2_1_1:109730792-109745631:+|nuORF;ENST00000369938.5_1_1:109730226-109745631:+|nuORF;ENST00000490758.6_1_1:109716345-109734117:+|nuORF;ENST00000527996.5_1_1:109656894-109745573:+|nuORF;nc|ENSG00000116299|Q6UXG2-2|ELAPOR1;nc|ENSG00000116299|Q6UXG2-3|ELAPOR1;nc|ENSG00000116299|Q6UXG2-4|ELAPOR1	45.9519527083369	0.35044536499095585	5				NaN	NaN	0	NaN	4941	3596	8535
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8540	26.497	NaN	2087.9	30	0	243.85	0.106			+	37881	SNVVREQL	8	60	472.7609772504234	943.5074015676469	2	472.76123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SNVVREQL_	REV__ENSG00000135870|ENST00000367696|RC3H1;REV__nc|ENSG00000135870|Q5TC82-2|RC3H1	54.776311868738084	0.5534952410049249	5				NaN	NaN	0	NaN	4942	3596	8535
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8541	26.499	NaN	943.8	30	0	109.64	0.033			+	46158	VDSTKAVK	8	34	424.24772613747297	846.480899341746	2	424.7501220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VDSTKAVK_	REV__CASD1|p.L198V|1|0.38|ENSG00000127995|chr7:94533766-94533766|T/G|missense_variant	18.324413293986947	0.7971860551947066	5				NaN	NaN	0	NaN	4943	3596	8535
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8542	26.5	NaN	3162.8	30	0	514.6	0.146	+			26729	LVLKNSCF	8	50	462.255295150893	NaN	0	462.2554931640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LVLKNSCF_	ENSG00000259956|ENST00000563281|RBM15B;nc|ENSG00000259956|Q8NDT2-2|RBM15B;RBM15B|p.S844Pfs*27|2|0.54|ENSG00000259956|chr3:51393922-51393922|G/-|frameshift_variant	31.954861631926434	1.7418937515398478	5				NaN	NaN	0	NaN	4944	3596	8535
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8557	26.533	NaN	4795.6	30	0	755.1	0.214	+			36538	SFHNIHNTF	9	67	558.7645252554596	1115.514497577719	2	558.7652587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SFHNIHNTF_	ENSG00000154473|ENST00000368865|BUB3;ENST00000481952.1_1_10:124921781-124922345:+|nuORF;nc|ENSG00000154473|O43684-2|BUB3	83.6470233535746	0.08277643980271215	5				NaN	NaN	0	NaN	4956	3599	8556
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8558	26.537	NaN	2998	30	0	630.78	0.106	+			46470	VETEIQRV	8	59	487.2704427527024	972.5263325722049	2	487.26904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VETEIQRV_	AMOT|p.L850Cfs*59|1|0.13|ENSG00000126016|chrX:112779606-112779606|G/-|frameshift_variant;ENSG00000126016|ENST00000371959|AMOT;nc|ENSG00000126016|Q4VCS5-2|AMOT	87.75429964447693	0.2842685068779738	5				NaN	NaN	0	NaN	4957	3599	8556
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8559	26.539	NaN	4171.2	30	0	793.28	0.106			+	-1	TIHDELEMI	9	43	372.8454568192852	1115.5145410580556	3	372.845458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_TIHDELEM(Oxidation (M))I_	REV__ENSG00000144674|ENST00000361924|GOLGA4;REV__GOLGA4|p.N1805Kfs*18|1|0.11|ENSG00000144674|chr3:37327293-37327294|-/A|frameshift_variant;REV__GOLGA4|p.N1805Tfs*6|1|0.38|ENSG00000144674|chr3:37327294-37327294|A/-|frameshift_variant;REV__GOLGA4|p.Q1536H|1|0.35|ENSG00000144674|chr3:37326494-37326494|G/T|missense_variant;REV__nc|ENSG00000144674|Q13439-3|GOLGA4;REV__nc|ENSG00000144674|Q13439-4|GOLGA4;REV__nc|ENSG00000144674|Q13439-5|GOLGA4	24.519189625965996	0.574102787014149	5				NaN	NaN	0	NaN	4958	3599	8556
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8560	26.54	NaN	1615.7	30	0	399.67	0.106	+			20495	KFARYYLA	8	54	516.2898562929958	NaN	0	516.2899169921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KFARYYLA_	ENSG00000174669|ENST00000357440|SLC29A2;nc|ENSG00000174669|Q14542-3|SLC29A2;nc|ENSG00000174669|Q14542-4|SLC29A2	28.2542754592877	1.7418937515398478	5				NaN	NaN	0	NaN	4959	3599	8556
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8561	26.542	NaN	2852.4	30	0	416.44	0.106	+			6438	AVYADSGNFK	10	62	536.2591745045642	1070.5037960759282	2	536.2593383789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVYADSGNFK_	ENSG00000145780|ENST00000274457|FEM1C	96.0336014099291	0.09653029772959643	5				NaN	NaN	0	NaN	4960	3599	8556
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8562	26.544	NaN	1324.2	30	0	83.95	0.106	+			51574	YYKSTSSAF	9	54	527.2486403875637	NaN	0	527.248291015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YYKSTSSAF_	ENSG00000197093|ENST00000360039|GAL3ST4;ENST00000423751.2_1_7:99757553-99764836:-|nuORF;GAL3ST4|p.F427Sfs*17|1|0.32|ENSG00000197093|chr7:100160111-100160111|G/-|frameshift_variant;nc|ENSG00000197093|Q96RP7-2|GAL3ST4	49.44154591367651	0.21054156626303966	5				NaN	NaN	0	NaN	4961	3599	8556
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8563	26.546	NaN	785.55	30	0	81.045	0.037			+	-1	LAMDPNQLQK	10	43	587.29833984375	NaN	0	587.29833984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_LAM(Oxidation (M))DPNQLQK_	REV__ENSG00000110675|ENST00000265840|ELMOD1;REV__nc|ENSG00000110675|Q8N336-2|ELMOD1;REV__nc|ENSG00000110675|Q8N336-3|ELMOD1	19.996771675451527	0.4201028297492154	5				NaN	NaN	0	NaN	4962	3599	8556
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8577	26.576	NaN	3446.9	30	0	790.88	0.214	+			41993	SVYGYGVQK	9	61	500.7581809570536	999.5018089809072	2	500.7580261230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVYGYGVQK_	ENSG00000107164|ENST00000319725|FUBP3;FUBP3|p.P395Lfs*27|2|0.27|ENSG00000107164|chr9:130630689-130630689|C/-|frameshift_variant	64.20726635412375	0.17854274437659667	5				NaN	NaN	0	NaN	4973	3602	8576
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8578	26.579	NaN	3429.2	30	0	332.97	0.106	+			42374	TAINASRAL	9	62	458.7637477094743	915.5129424857486	2	458.76373291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAINASRAL_	ENSG00000174373|ENST00000680220|RALGAPA1;ENST00000443361.1_1_9:108287470-108288637:+|nuORF;nc|ENSG00000174373|Q6GYQ0-2|RALGAPA1;nc|ENSG00000174373|Q6GYQ0-5|RALGAPA1;nc|ENSG00000174373|Q6GYQ0-6|RALGAPA1;nc|ENSG00000174373|Q6GYQ0-7|RALGAPA1;nc|ENSG00000174373|Q6GYQ0|RALGAPA1	45.02220120713402	0.3613509778819777	5				NaN	NaN	0	NaN	4974	3602	8576
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8579	26.581	NaN	2509	30	0	724.5	0.106	+			5034	ATSEIFASK	9	57	477.2508029615837	952.4870529899674	2	477.25054931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATSEIFASK_	ENSG00000005810|ENST00000544440|MYCBP2;MYCBP2|p.C1064Ifs*31|1|0.09|ENSG00000005810|chr13:77211267-77211279|TTATCAGAAGGCA/-|frameshift_variant;MYCBP2|p.N1867Tfs*9|1|0.15|ENSG00000005810|chr13:77171572-77171572|T/-|frameshift_variant;MYCBP2|p.N3049*|1|0.11|ENSG00000005810|chr13:77097894-77097895|TT/-|frameshift_variant;MYCBP2|p.P4047Qfs*26|2|0.35|ENSG00000005810|chr13:77067782-77067782|G/-|frameshift_variant;MYCBP2|p.T1507Ffs*24|1|0.04|ENSG00000005810|chr13:77185189-77185190|-/TTGTAAA|frameshift_variant;MYCBP2|p.T4311Pfs*37|1|0.14|ENSG00000005810|chr13:77059619-77059619|G/-|frameshift_variant;MYCBP2|p.V3749*|1|0.12|ENSG00000005810|chr13:77081486-77081486|C/-|frameshift_variant;nc|ENSG00000005810|O75592-2|MYCBP2	45.02220120713402	0.3613509778819777	5				NaN	NaN	0	NaN	4975	3602	8576
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8580	26.583	NaN	1646.1	30	0	197.84	0.106			+	21517	KNQEDLLIA	9	58	522.2900796244551	1042.56560631571	2	522.2909545898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KNQEDLLIA_	REV__ENSG00000100319|ENST00000344318|ZMAT5	47.95952297671804	0.32689736945648856	5				NaN	NaN	0	NaN	4976	3602	8576
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8581	26.585	NaN	3991.6	30	0	306.32	0.106	+			8115	DYMKTTSNF	9	69	561.7419299363887	1121.4693069395773	2	561.7426147460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_DYM(Oxidation (M))KTTSNF_	ENSG00000165525|ENST00000298310|NEMF;nc|ENSG00000165525|O60524-3|NEMF;nc|ENSG00000165525|O60524-4|NEMF;NEMF|p.K641Rfs*9|1|0.15|ENSG00000165525|chr14:49802721-49802721|T/-|frameshift_variant;NEMF|p.M879*|1|0.12|ENSG00000165525|chr14:49789558-49789558|T/-|frameshift_variant;NEMF|p.M879Nfs*10|1|0.13|ENSG00000165525|chr14:49789557-49789558|-/T|frameshift_variant	53.08895987439943	0.27122541748218487	5				NaN	NaN	0	NaN	4977	3602	8576
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8582	26.587	NaN	2304.9	30	0	371.91	0.106	+			22004	KSFSTVTNT	9	61	492.75291535105805	983.4912777689161	2	492.7529602050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KSFSTVTNT_	ENSG00000276231|ENST00000619866|PIK3R6	56.632244143249146	0.24168844994051353	5				NaN	NaN	0	NaN	4978	3602	8576
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8583	26.588	NaN	5938.8	30	0	1730.8	0.037			+	17881	IGASGVRERAL	11	47	376.88863579214967	1127.644077976649	3	376.8887939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IGASGVRERAL_	REV__PTPRQ|p.G64R|1|0.25|ENSG00000139304|chr12:80445517-80445517|G/A|missense_variant	32.75053402867276	0.6462648045997152	5				NaN	NaN	0	NaN	4979	3602	8576
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8597	26.618	NaN	47161	30	0	5327.2	0.214	+			50511	YANSKAVTL	9	76	483.7662591623075	965.517965391415	2	483.7662048339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YANSKAVTL_	ENSG00000164091|ENST00000296490|WDR82;ENST00000487402.1_1_3:52291508-52301068:-|nuORF	168.25843898104137	0.0030641937004078144	5				NaN	NaN	0	NaN	4990	3605	8596
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8598	26.622	NaN	7016.4	30	0	719.44	0.106	+			48710	VTTPQAVSV	9	67	451.25280028187143	NaN	0	451.2528381347656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTTPQAVSV_	ENSG00000095906|ENST00000262302|NUBP2	77.31757898189308	0.08057531075035683	5				NaN	NaN	0	NaN	4991	3605	8596
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8599	26.624	NaN	4596.9	30	0	735.23	0.106	+			14531	GTDRTGFTFK	10	64	565.285616473005	1128.55668001281	2	565.285888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTDRTGFTFK_	ENSG00000100297|ENST00000216122|MCM5	55.08391021199286	0.41055145962533396	5				NaN	NaN	0	NaN	4992	3605	8596
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8600	26.625	NaN	17106	30	0	6098.2	0.106	+			14532	GTDRTGFTFK	10	56	377.1927116261676	1128.5563054787028	3	377.192626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTDRTGFTFK_	ENSG00000100297|ENST00000216122|MCM5	24.231819034082204	0.6819444564287812	5				NaN	NaN	0	NaN	4993	3605	8596
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8601	26.627	NaN	6097	30	0	937.71	0.106	+			41697	SVSDLAPPR	9	58	471.25641800150015	940.4982830698003	2	471.2558288574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVSDLAPPR_	ENSG00000166295|ENST00000299381|ANAPC16	66.42927471994793	0.16001998865088202	5				NaN	NaN	0	NaN	4994	3605	8596
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8602	26.629	NaN	2358.5	30	0	221.49	0.034	+			41445	SVNKKTIPS	9	58	487.2875741779246	972.5605954226493	2	487.28729248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVNKKTIPS_	ENSG00000144671|ENST00000448498|SLC22A14;SLC22A14|p.T508Hfs*73|1|0.1|ENSG00000144671|chr3:38315696-38315697|-/C|frameshift_variant	51.19269402634007	0.2889735674168909	5				NaN	NaN	0	NaN	4995	3605	8596
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8603	26.63	NaN	1471.2	30	0	412.37	0.139	+			2031	AKPSDLQLS	9	49	479.7643104236782	957.5140679141564	2	479.7641906738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AKPSDLQLS_	ENSG00000100427|ENST00000311597|MLC1;MLC1|p.C46Afs*12|1|0.57|ENSG00000100427|chr22:50084768-50084768|G/-|frameshift_variant;nc|ENSG00000100427|Q15049-2|MLC1	37.81151784470057	0.4459294069877048	5				NaN	NaN	0	NaN	4996	3605	8596
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8618	26.663	NaN	39874	30	0	13752	0.214	+			15141	GTSEFITGK	9	70	470.24273615919105	938.4709193851821	2	470.2425231933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTSEFITGK_	ENSG00000110002|ENST00000456829|VWA5A;VWA5A|p.D571Mfs*3|1|0.56|ENSG00000110002|chr11:124137094-124137094|A/-|frameshift_variant	120.8684288430529	0.02067403653475984	5				NaN	NaN	0	NaN	5008	3608	8617
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8619	26.667	NaN	4931	30	0	1482.5	0.106				-1	AVMLGQPIS	9	63	466.24981722961184	930.4850815260237	2	466.2492980957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_AVM(Oxidation (M))LGQPIS_	ACO1|p.P659Lfs*4|1|0.24|ENSG00000122729|chr9:32434574-32434574|C/-|frameshift_variant;ACO1|p.Y336Ifs*13|1|0.32|ENSG00000122729|chr9:32423347-32423348|-/A|frameshift_variant;ENSG00000122729|ENST00000309951|ACO1	47.91560031466742	0.327412564698279	5				NaN	NaN	0	NaN	5009	3608	8617
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8620	26.669	NaN	3202.9	30	0	448.5	0.106				-1	KSCESFVCG	9	68	537.2233457108961	1072.432138488592	2	537.22412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_KSC(Carbamidomethyl (C))ESFVC(Carbamidomethyl (C))G_	ENSG00000171295|ENST00000304060|ZNF440;ZNF440|p.T180Pfs*13|1|0.32|ENSG00000171295|chr19:11831710-11831710|A/-|frameshift_variant	45.97224482568171	0.3502073465782774	5				NaN	NaN	0	NaN	5010	3608	8617
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8621	26.67	NaN	3910.3	30	0	896.29	0.106	+			17420	IASSRSVDL	9	58	474.2611329818637	946.5077130305274	2	474.260986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IASSRSVDL_	ENSG00000135052|ENST00000388712|GOLM1;GOLM1|p.K180Nfs*4|1|0.16|ENSG00000135052|chr9:86040796-86040797|-/A|frameshift_variant;GOLM1|p.N182Efs*2|1|0.23|ENSG00000135052|chr9:86040796-86040797|-/T|frameshift_variant;nc|ENSG00000135052|Q8NBJ4-2|GOLM1	61.691277971877994	0.19951612995419254	5				NaN	NaN	0	NaN	5011	3608	8617
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8622	26.672	NaN	1905.8	30	0	835.32	0.106			+	41511	SVPQCCTTA	9	50	455.19350308479096	908.372453236382	2	455.193603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVPQCCTTA_	REV__CON__Q9BYR9;REV__ENSG00000212724|ENST00000391418|KRTAP2-3;REV__ENSG00000212725|ENST00000391419|KRTAP2-1;REV__ENSG00000213417|ENST00000394015|KRTAP2-4;REV__ENSG00000214518|ENST00000398477|KRTAP2-2;REV__KRTAP2-3|p.Q105R|1|0.4|ENSG00000212724|chr17:41059737-41059737|T/C|missense_variant	31.954861631926434	0.5046124803899898	5				NaN	NaN	0	NaN	5012	3608	8617
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8623	26.674	NaN	2937	30	0	244.58	0.035	+			32508	QVQELELK	8	60	493.77935114148494	985.5441493497699	2	493.76654052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QVQELELK_	ENSG00000198929|ENST00000361897|NOS1AP;nc|ENSG00000198929|O75052-2|NOS1AP;nc|ENSG00000198929|O75052-3|NOS1AP	87.75429964447693	0.2842685068779738	5				NaN	NaN	0	NaN	5013	3608	8617
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8624	26.675	NaN	1843.5	30	0	104.73	0.14	+			12875	GEQYDQAKL	9	60	526.2562427382936	1050.4979325433872	2	526.2568969726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GEQYDQAKL_	CNOT1|p.Q904Sfs*9|4|0.29|ENSG00000125107|chr16:58555436-58555436|A/-|frameshift_variant;ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1;nc|ENSG00000125107|A5YKK6-4|CNOT1	56.43379154798735	0.2433427591689151	5				NaN	NaN	0	NaN	5014	3608	8617
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8642	26.714	NaN	12155	30	0	5719.4	0.214	+			14200	GSSASLVLK	9	58	431.2556063271249	860.4966597210498	2	431.2554016113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSSASLVLK_	ENSG00000075415|ENST00000552981|SLC25A3;ENST00000546766.5_1_12:98989476-98995303:+|nuORF;ENST00000547869.1_1_12:98994914-98995303:+|nuORF;ENST00000551123.5_1_12:98989412-98995303:+|nuORF;nc|ENSG00000075415|Q00325|SLC25A3	101.25262130126117	0.03792372629710479	5				NaN	NaN	0	NaN	5029	3611	8641
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8643	26.718	NaN	18742	30	0	3132.6	0.106	+			6662	AYVHMVTHF	9	80	560.7654394269989	1119.5163259207977	2	560.7659912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_AYVHM(Oxidation (M))VTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	143.97458802002905	0.008615427130953528	5				NaN	NaN	0	NaN	5030	3611	8641
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8644	26.72	NaN	10789	30	0	2249.4	0.106			+	50219	WNGGSRRPSI	10	78	565.2953226864018	1128.5760924396036	2	565.2955932617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_WNGGSRRPSI_	REV__ENST00000395270.5_1_7:72361184-72361244:+|nuORF	51.19269402634007	0.44601001148513897	5				NaN	NaN	0	NaN	5031	3611	8641
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8645	26.721	NaN	5418.6	30	0	764.68	0.106	+			34752	RYASINTHL	9	68	537.7878463249881	1073.561139716776	2	537.788330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RYASINTHL_	CSNK1D|p.R358Gfs*12|1|0.25|ENSG00000141551|chr17:82249000-82249000|G/-|frameshift_variant;CSNK1D|p.T344Hfs*26|1|0.26|ENSG00000141551|chr17:82249459-82249459|G/-|frameshift_variant;ENSG00000141551|ENST00000314028|CSNK1D;ENSG00000213923|ENST00000396832|CSNK1E;ENST00000578904.1_1_17:80208040-80213403:-|nuORF;ENST00000581241.5_1_17:80206597-80211051:-|nuORF;ENST00000584377.5_1_17:80203885-80211156:-|nuORF;nc|ENSG00000141551|P48730-2|CSNK1D	72.87924865735499	0.12833875048249987	5				NaN	NaN	0	NaN	5032	3611	8641
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8646	26.723	NaN	13460	30	0	4914	0.106	+			7285	DAPVDDLTRK	10	62	377.1995373271439	1128.5767825816317	3	377.1994323730469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DAPVDDLTRK_	ENSG00000105939|ENST00000242351|ZC3HAV1;nc|ENSG00000105939|Q7Z2W4-2|ZC3HAV1;nc|ENSG00000105939|Q7Z2W4-3|ZC3HAV1	26.69291269510374	0.6618461711292317	5				NaN	NaN	0	NaN	5033	3611	8641
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8647	26.725	NaN	3157.3	30	0	1034.9	0.038			+	13075	GFLEDKGGIMK	11	50	597.8127105856508	1193.6108682381016	2	597.8133544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GFLEDKGGIMK_	REV__tr|U7T336|U7T336_FUSNUGPHfamilyglycoside/pentoside/hexuronide:cationsymporterOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00373PE=3SV=1	36.527901853580055	0.6054519527965578	5				NaN	NaN	0	NaN	5034	3611	8641
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8648	26.726	NaN	2165.1	30	0	402.68	0.141	+			38955	SSQTTHGLY	9	57	497.234924217281	992.455295501362	2	497.23516845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSQTTHGLY_	ENSG00000177614|ENST00000391860|PGBD5;nc|ENSG00000177614|Q8N414-2|PGBD5;PGBD5|p.E365Gfs*23|1|0.24|ENSG00000177614|chr1:230325388-230325389|-/C|frameshift_variant	60.97194046774394	0.20551255781574032	5				NaN	NaN	0	NaN	5035	3611	8641
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8662	26.757	NaN	3208.9	30	0	761.78	0.214	+			29091	NTMNQFVNK	9	68	548.2656682503189	1094.5167835674376	2	548.2662963867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NTMNQFVNK_	ENSG00000168090|ENST00000303904|COPS6	90.60085204095205	0.06317133949006545	5				NaN	NaN	0	NaN	5046	3614	8661
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8663	26.761	NaN	1473.2	30	0	142.8	0.106			+	10922	FDLKEPLKY	9	55	576.8173828125	NaN	0	576.8173828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FDLKEPLKY_	REV__ENSG00000116791|ENST00000340866|CRYZ;REV__nc|ENSG00000116791|Q08257-3|CRYZ	35.61828744233558	0.29773779453147337	5				NaN	NaN	0	NaN	5047	3614	8661
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8664	26.763	NaN	2321.7	30	0	464.49	0.106	+			46997	VKSPNLSEI	9	55	493.77935114148494	985.5441493497699	2	493.779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VKSPNLSEI_	ENSG00000173517|ENST00000682557|PEAK1;PEAK1|p.F1319Lfs*11|1|0.37|ENSG00000173517|chr15:77133125-77133125|A/-|frameshift_variant;PEAK1|p.N1433Tfs*19|1|0.1|ENSG00000173517|chr15:77115099-77115099|T/-|frameshift_variant;PEAK1|p.Q863Kfs*186|1|0.48|ENSG00000173517|chr15:77179340-77179340|G/-|frameshift_variant	34.172542307311794	0.4838870758800184	5				NaN	NaN	0	NaN	5048	3614	8661
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8665	26.764	NaN	3676.3	30	0	660.43	0.106				-1	FLERVKCSL	9	46	384.5463997145073	1150.6173697437218	3	384.5464782714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_FLERVKC(Carbamidomethyl (C))SL_	ENST00000564690.1_1_16:71322830-71323112:-|nuORF	31.529811441608018	0.5085848003137583	5				NaN	NaN	0	NaN	5049	3614	8661
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8666	26.766	NaN	3571	30	0	462.45	0.106	+			20619	KGEKGDQGIP	10	62	514.7721306060138	1027.5297082788275	2	514.77197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KGEKGDQGIP_	ENSG00000084636|ENST00000373672|COL16A1;ENST00000479100.1_1_1:32136193-32138672:-|nuORF;nc|ENSG00000084636|Q07092-2|COL16A1	44.377184641726394	0.5088115166961078	5				NaN	NaN	0	NaN	5050	3614	8661
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8667	26.768	NaN	1565.4	30	0	261.84	0.035	+			31838	QPSPLPKQL	9	57	504.2979874656792	NaN	0	504.29779052734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QPSPLPKQL_	ENST00000472605.1_1_9:35810632-35811933:-|nuORF	34.172542307311794	0.30503706118289736	5				NaN	NaN	0	NaN	5051	3614	8661
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8668	26.769	NaN	2756.2	30	0	526.1	0.145			+	39777	STKLIVATFFI	11	52	413.9151149356027	1238.723515407008	3	413.9150085449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STKLIVATFFI_	REV__ENST00000379066.5_1_2:37543718-37543916:-|nuORF	47.227680397652996	0.4590463137409202	5				NaN	NaN	0	NaN	5052	3614	8661
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8681	26.798	NaN	27325	30	0	14269	0.214	+			51018	YKEELQTK	8	66	519.7766242609058	1037.5386955886115	2	519.7770385742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YKEELQTK_	ENSG00000105793|ENST00000222511|GTPBP10;nc|ENSG00000105793|A4D1E9-2|GTPBP10	71.29570347882199	0.39610197767395533	5				NaN	NaN	0	NaN	5062	3617	8680
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8682	26.801	NaN	2223.7	30	0	1490	0.106				-1	 	0	29	322.1935812844998	642.3726096357997	2	322.1935119628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5063	3617	8680
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8683	26.803	NaN	5197.8	30	0	2148.7	0.106	+			14862	GTLMWHQMK	9	42	383.1842415977625	1146.5308953934875	3	383.184326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_GTLM(Oxidation (M))WHQMK_	ENST00000346169.6_1_3:184032401-184033585:+|nuORF;ENST00000352767.7_2_3:184032446-184033585:+|nuORF	47.657333605630114	0.33044192980041115	5				NaN	NaN	0	NaN	5064	3617	8680
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8684	26.805	NaN	1402.3	30	0	156.6	0.106	+			7485	DGEEETSQP	9	55	496.1964418988932	990.3783308645865	2	496.19622802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DGEEETSQP_	ENSG00000175550|ENST00000312515|DRAP1;ENST00000530791.5_1_11:65687869-65688903:+|nuORF;nc|ENSG00000175550|Q14919-2|DRAP1	51.33545320467046	0.2872990594074956	5				NaN	NaN	0	NaN	5065	3617	8680
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8685	26.807	NaN	1643.7	30	0	239.99	0.106				-1	AVCYQAITK	9	53	527.2734627567819	1052.5323725803637	2	527.2737426757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_AVC(Carbamidomethyl (C))YQAITK_	ENSG00000140632|ENST00000321919|GLYR1;nc|ENSG00000140632|Q49A26-3|GLYR1;nc|ENSG00000140632|Q49A26-4|GLYR1;nc|ENSG00000140632|Q49A26-5|GLYR1	31.529811441608018	0.5085848003137583	5				NaN	NaN	0	NaN	5066	3617	8680
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8686	26.809	NaN	1359.6	30	0	146.66	0.035	+			10435	EVKVGNKMV	9	58	502.28280638156514	NaN	0	502.2840576171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EVKVGNKMV_	ENSG00000186522|ENST00000397712|SEPTIN10;ENST00000468616.5_1_2:110303765-110325397:-|nuORF;ENST00000483047.5_1_2:110321941-110325397:-|nuORF;nc|ENSG00000186522|Q9P0V9-2|SEPTIN10;nc|ENSG00000186522|Q9P0V9-3|SEPTIN10	45.9519527083369	0.2345902329052062	5				NaN	NaN	0	NaN	5067	3617	8680
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8687	26.809	NaN	1027.8	30	0	171.69	0.14			+	-1	PMDAVPIMQ	9	49	509.2405349388841	1016.4665169445682	2	509.2409362792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_PMDAVPIM(Oxidation (M))Q_	REV__ENSG00000187257|ENST00000334955|RSBN1L;REV__ENST00000462800.1_1_7:77397938-77402638:+|nuORF;REV__ENST00000468035.1_1_7:77394853-77402638:+|nuORF;REV__nc|ENSG00000187257|Q6PCB5-2|RSBN1L;REV__PTPN12-RSBN1L|1|fusion;REV__PTPN12-RSBN1L|2|fusion;REV__PTPN12-RSBN1L|3|fusion;REV__PTPN12-RSBN1L|4|fusion;REV__PTPN12-RSBN1L|5|fusion;REV__PTPN12-RSBN1L|6|fusion;REV__PTPN12-RSBN1L|7|fusion;REV__PTPN12-RSBN1L|8|fusion;REV__RSBN1L|p.N549Ifs*27|1|0.34|ENSG00000187257|chr7:77773162-77773162|A/-|frameshift_variant	21.9598887501803	0.5980208138527809	5				NaN	NaN	0	NaN	5068	3617	8680
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8704	26.846	NaN	3624.5	30	0	448.53	0.214	+			23098	KVVEGSFVYK	10	67	578.3239965272437	1154.6334401212873	2	578.8259887695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVVEGSFVYK_	ENSG00000203879|ENST00000447750|GDI1;ENST00000491154.1_1_X:153666748-153668487:+|nuORF	55.25784877116998	0.40896950947817584	5				NaN	NaN	0	NaN	5082	3620	8703
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8705	26.849	NaN	2353.6	30	0	331.99	0.106			+	8051	DVDGAYIQK	9	58	504.75389775763006	NaN	0	504.7537536621094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DVDGAYIQK_	REV__ENSG00000102543|ENST00000251108|CDADC1;REV__nc|ENSG00000102543|Q9BWV3-4|CDADC1	58.78195531508484	0.1545138866451181	5				NaN	NaN	0	NaN	5083	3620	8703
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8706	26.851	NaN	2152.6	30	0	454.84	0.106	+			9789	ENVIRELK	8	58	500.79281968760165	999.5710864420033	2	501.2373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ENVIRELK_	tr|U7SM17|U7SM17_FUSNUAmidinotransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02017PE=4SV=1	41.42661286455405	0.6474601000989023	5				NaN	NaN	0	NaN	5084	3620	8703
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8707	26.853	NaN	1565.7	30	0	504.03	0.106	+			32720	RALQQPLE	8	47	477.77158560129635	953.5286182693927	2	477.7716064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RALQQPLE_	ARHGEF40|p.H1487Tfs*15|3|0.37|ENSG00000165801|chr14:21088033-21088033|C/-|frameshift_variant;ENSG00000165801|ENST00000298694|ARHGEF40;ENST00000554514.1_1_14:21549058-21555515:+|nuORF;ENST00000555232.5_1_14:21549679-21554039:+|nuORF;nc|ENSG00000165801|Q8TER5-2|ARHGEF40;nc|ENSG00000165801|Q8TER5-3|ARHGEF40;nc|ENSG00000165801|Q8TER5-4|ARHGEF40	30.503639358989545	0.7238069182250283	5				NaN	NaN	0	NaN	5085	3620	8703
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8708	26.855	NaN	1494.3	30	0	313.24	0.106	+			21469	KNGQKACL	8	50	431.23343451567865	NaN	0	431.2320861816406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KNGQKACL_	ENSG00000081041|ENST00000508487|CXCL2	37.028477286268924	1.7418937515398478	5				NaN	NaN	0	NaN	5086	3620	8703
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8709	26.856	NaN	974.49	30	0	74.602	0.032			+	26598	LTVTGGPAV	9	41	407.7369001192112	813.4592473052224	2	407.73699951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LTVTGGPAV_	REV__AGER|p.S283Afs*4|1|0.17|ENSG00000204305|chr6:32182365-32182365|G/-|frameshift_variant;REV__ENSG00000204305|ENST00000375076|AGER;REV__nc|ENSG00000204305|Q15109-10|AGER;REV__nc|ENSG00000204305|Q15109-2|AGER;REV__nc|ENSG00000204305|Q15109-3|AGER;REV__nc|ENSG00000204305|Q15109-4|AGER;REV__nc|ENSG00000204305|Q15109-6|AGER;REV__nc|ENSG00000204305|Q15109-7|AGER;REV__nc|ENSG00000204305|Q15109-8|AGER;REV__nc|ENSG00000204305|Q15109-9|AGER	63.30626980617807	0.18605348971131092	5				NaN	NaN	0	NaN	5087	3620	8703
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8710	26.857	NaN	1262.2	30	0	86.736	0.139			+	24483	LGGSSLTSLP	10	52	466.2578646632885	NaN	0	466.2575378417969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LGGSSLTSLP_	REV__TMEM129|p.P123Hfs*42|1|0.1|ENSG00000168936|chr4:1718464-1718464|G/-|frameshift_variant	49.44154591367651	0.30913310806145605	5				NaN	NaN	0	NaN	5088	3620	8703
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8723	26.886	NaN	1709.4	30	0	121.01	0.215	+			27706	MPYSHPSSY	9	63	534.7265650101338	1067.4385770870674	2	534.7269897460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MPYSHPSSY_	ENSG00000164190|ENST00000282516|NIPBL;ENST00000504430.5_1_5:36961623-36995905:+|nuORF;nc|ENSG00000164190|Q6KC79-2|NIPBL;nc|ENSG00000164190|Q6KC79-3|NIPBL;NIPBL|p.F1423Lfs*15|1|0.43|ENSG00000164190|chr5:37008032-37008032|T/-|frameshift_variant;NIPBL|p.I2776Lfs*3|1|0.17|ENSG00000164190|chr5:37064797-37064797|A/-|frameshift_variant;NIPBL|p.K603Sfs*11|2|0.29|ENSG00000164190|chr5:36984981-36984981|A/-|frameshift_variant;NIPBL|p.L2220Ffs*3|1|0.21|ENSG00000164190|chr5:37048567-37048568|-/T|frameshift_variant;NIPBL|p.R505Efs*35|1|0.19|ENSG00000164190|chr5:36984687-36984687|A/-|frameshift_variant	68.78682469695295	0.14603441672067394	5				NaN	NaN	0	NaN	5098	3623	8722
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8724	26.89	NaN	2823.6	30	0	275.58	0.106			+	45816	VAIITTTMY	9	60	506.7744075308633	1011.5342621285266	2	506.77471923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VAIITTTMY_	REV__ENSG00000079215|ENST00000265113|SLC1A3;REV__nc|ENSG00000079215|P43003-2|SLC1A3;REV__SLC1A3|p.V319Efs*4|1|0.04|ENSG00000079215|chr5:36679719-36679720|-/AGAAATTT|frameshift_variant	53.351449002276354	0.2690372970092375	5				NaN	NaN	0	NaN	5099	3623	8722
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8725	26.892	NaN	1701	30	0	207.6	0.106	+			21535	KNSQSVVFL	9	55	511.28696385234565	1020.5593747714913	2	511.2870178222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KNSQSVVFL_	ENST00000490096.5_1_10:126100696-126102934:-|nuORF	31.529811441608018	0.5085848003137583	5				NaN	NaN	0	NaN	5100	3623	8722
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8726	26.893	NaN	1889.3	30	0	166.58	0.106	+			3916	ATASAIEAMK	10	65	496.75725760727806	NaN	0	496.757080078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATASAIEAMK_	ENSG00000100106|ENST00000644935|TRIOBP;nc|ENSG00000100106|Q9H2D6-2|TRIOBP;nc|ENSG00000100106|Q9H2D6-3|TRIOBP;nc|ENSG00000100106|Q9H2D6-5|TRIOBP;nc|ENSG00000100106|Q9H2D6-7|TRIOBP	68.84614121027924	0.16203925040239886	5				NaN	NaN	0	NaN	5101	3623	8722
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8727	26.895	NaN	1218.8	30	0	237.28	0.106			+	10825	FAPHTYALG	9	48	488.74987324569145	975.4851935581829	2	488.750244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FAPHTYALG_	REV__ENST00000478639.1_1_3:183883993-183884404:+|nuORF	42.47446043378293	0.39123495718708534	5				NaN	NaN	0	NaN	5102	3623	8722
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8728	26.897	NaN	1487.1	30	0	179.7	0.106	+			47820	VSKLCHLF	8	52	473.7629158190574	NaN	0	473.7629699707031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VSKLCHLF_	ENSG00000157657|ENST00000374126|ZNF618;ENST00000470105.1_1_9:116790870-116812444:+|nuORF;nc|ENSG00000157657|Q5T7W0-2|ZNF618;nc|ENSG00000157657|Q5T7W0-4|ZNF618;ZNF618|p.N872Mfs*52|2|0.38|ENSG00000157657|chr9:114049913-114049913|A/-|frameshift_variant	50.0245360154114	1.7418937515398478	5				NaN	NaN	0	NaN	5103	3623	8722
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8729	26.899	NaN	3784.8	30	0	639.77	0.034			+	17925	IGKLVSPSQ	9	56	464.7766832594082	927.5388135856164	2	465.2777099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IGKLVSPSQ_	REV__DOCK9|p.N1450Mfs*6|1|0.28|ENSG00000088387|chr13:98831683-98831683|T/-|frameshift_variant;REV__DOCK9|p.T1335Yfs*4|2|0.43|ENSG00000088387|chr13:98850057-98850058|-/A|frameshift_variant;REV__ENSG00000088387|ENST00000682017|DOCK9;REV__nc|ENSG00000088387|Q9BZ29-3|DOCK9;REV__nc|ENSG00000088387|Q9BZ29-4|DOCK9;REV__nc|ENSG00000088387|Q9BZ29-5|DOCK9;REV__nc|ENSG00000088387|Q9BZ29-6|DOCK9;REV__nc|ENSG00000088387|Q9BZ29|DOCK9	34.172542307311794	0.4838870758800184	5				NaN	NaN	0	NaN	5104	3623	8722
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8741	26.924	NaN	1858.2	30	0	466.4	0.214	+			45084	TVIDSQTHY	9	58	532.2559154089348	1062.4972778846695	2	532.2568969726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVIDSQTHY_	ENSG00000166557|ENST00000299705|TMED3	54.776311868738084	0.25715957988447635	5				NaN	NaN	0	NaN	5113	3626	8740
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8742	26.928	NaN	5114.8	30	0	1483.1	0.106			+	48752	VTVPWVPQGLG	11	56	384.88605476384356	1151.6363348917307	3	384.8858337402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTVPWVPQGLG_	REV__SLC27A5|p.A28T|1|0.67|ENSG00000083807|chr19:58511874-58511874|C/T|missense_variant	31.634271133179894	0.6579734920221648	5				NaN	NaN	0	NaN	5114	3626	8740
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8743	26.93	NaN	2045.4	30	0	419.49	0.106			+	11413	FLQPVVGLAG	10	56	500.79281968760165	999.5710864420033	2	500.7926330566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FLQPVVGLAG_	REV__ENSG00000142583|ENST00000377424|SLC2A5;REV__nc|ENSG00000142583|P22732-2|SLC2A5;REV__SLC2A5|p.G416Afs*13|1|0.29|ENSG00000142583|chr1:9037952-9037952|C/-|frameshift_variant	40.77816245573522	0.5419747034533848	5				NaN	NaN	0	NaN	5115	3626	8740
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8744	26.932	NaN	952.42	30	0	286.41	0.037	+			44611	TTDSGPYFEK	10	51	572.7615243275088	NaN	0	572.761962890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TTDSGPYFEK_	ENSG00000100354|ENST00000454349|TNRC6B;nc|ENSG00000100354|Q9UPQ9-1|TNRC6B;nc|ENSG00000100354|Q9UPQ9-2|TNRC6B;TNRC6B|p.A1354Tfs*46|1|0.47|ENSG00000100354|chr22:40301265-40301266|-/ACCCAAC|frameshift_variant;TNRC6B|p.G1342Wfs*56|1|0.32|ENSG00000100354|chr22:40301234-40301235|-/T|frameshift_variant	41.42661286455405	0.3598046802465243	5				NaN	NaN	0	NaN	5116	3626	8740
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8755	26.957	NaN	3137.4	30	0	395.24	0.214	+			41912	SVVGNFQEK	9	63	504.2610388280182	1006.5075247228364	2	504.2614440917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVVGNFQEK_	ENSG00000180061|ENST00000326652|TMEM150B	44.639436926238396	0.36584064966046625	5				NaN	NaN	0	NaN	5124	3629	8754
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8756	26.96	NaN	7769	30	0	958.64	0.106	+			3441	ASQLVGIEK	9	64	472.77427043346444	943.5339879337289	2	472.7736511230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASQLVGIEK_	ENSG00000077152|ENST00000646651|UBE2T	95.4829727501206	0.04940705645337811	5				NaN	NaN	0	NaN	5125	3629	8754
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8757	26.962	NaN	3703.1	30	0	1710.7	0.106	+			8775	EEIAKVEKL	9	64	529.8081807060205	1057.601808478841	2	529.80859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EEIAKVEKL_	ENSG00000170348|ENST00000303575|TMED10;ENST00000555036.1_1_14:75602424-75614456:-|nuORF;ENST00000556969.5_1_14:75601590-75614465:-|nuORF	120.27252224102466	0.02103478360410217	5				NaN	NaN	0	NaN	5126	3629	8754
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8758	26.964	NaN	1424.2	30	0	601.33	0.106				-1	 	0	29	329.18326541728686	656.3519779013737	2	329.1831970214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5127	3629	8754
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8759	26.966	NaN	5312	30	0	1662.5	0.106				-1	CPIYTCLRE	9	53	385.51601212838875	1153.5262069853663	3	385.5157775878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_CPIYTC(Carbamidomethyl (C))LRE_	ENSG00000134030|ENST00000256413|CTIF;ENST00000587860.1_1_18:46287547-46385927:+|nuORF;nc|ENSG00000134030|O43310-2|CTIF	32.81241826257853	0.4965981579233955	5				NaN	NaN	0	NaN	5128	3629	8754
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8760	26.968	NaN	1104.2	30	0	68.378	0.035	+			20197	KELEITKM	8	52	496.2778167246131	990.5410805160262	2	496.2782287597656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KELEITKM_	ENSG00000173230|ENST00000614479|GOLGB1;GOLGB1|p.D2495Tfs*21|1|0.22|ENSG00000173230|chr3:121691867-121691867|T/-|frameshift_variant;GOLGB1|p.E1174Gfs*19|1|0.24|ENSG00000173230|chr3:121696989-121696990|-/T|frameshift_variant;GOLGB1|p.E1375Sfs*20|1|0.04|ENSG00000173230|chr3:121696385-121696386|-/TGGA|frameshift_variant;GOLGB1|p.E1375Vfs*20|1|0.02|ENSG00000173230|chr3:121696386-121696387|-/AACTTAGTGAGAAAGAAGCAGCTCTCACT|frameshift_variant;GOLGB1|p.K2450Rfs*27|1|0.37|ENSG00000173230|chr3:121692000-121692000|T/-|frameshift_variant;GOLGB1|p.Q2186Sfs*19|1|0.31|ENSG00000173230|chr3:121693952-121693952|G/-|frameshift_variant;GOLGB1|p.S1501Vfs*38|1|0.2|ENSG00000173230|chr3:121696007-121696007|T/-|frameshift_variant;nc|ENSG00000173230|Q14789-2|GOLGB1;nc|ENSG00000173230|Q14789-3|GOLGB1;nc|ENSG00000173230|Q14789-4|GOLGB1;nc|ENSG00000173230|Q14789|GOLGB1	58.78195531508484	0.5138399468736706	5				NaN	NaN	0	NaN	5129	3629	8754
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8761	26.968	NaN	2319	30	0	1288.6	0.144			+	41529	SVPWGDKFWT	10	38	408.20216387406174	NaN	0	408.20208740234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVPWGDKFWT_	REV__ENSG00000143341|ENST00000271588|HMCN1;REV__HMCN1|p.G3718Afs*6|1|0.04|ENSG00000143341|chr1:186113995-186113995|G/-|frameshift_variant;REV__HMCN1|p.L3491Hfs*10|1|0.12|ENSG00000143341|chr1:186095419-186095420|-/ATAT|frameshift_variant;REV__HMCN1|p.S4801Rfs*11|1|0.07|ENSG00000143341|chr1:186145536-186145537|-/AGAATAA|frameshift_variant;REV__HMCN1|p.Y2955Ifs*3|1|0.29|ENSG00000143341|chr1:186082933-186082934|-/A|frameshift_variant;REV__nc|ENSG00000143341|Q96RW7-2|HMCN1	25.125986553469783	0.41767453237088564	5				NaN	NaN	0	NaN	5130	3629	8754
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8774	26.998	NaN	11277	30	0	2698.4	0.214	+			14315	GSYNKVFLAK	10	80	563.8166404929891	1125.6187280527781	2	563.81689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSYNKVFLAK_	ENSG00000099341|ENST00000215071|PSMD8;ENST00000592001.5_1_19:38865430-38871817:+|nuORF	176.59839592901017	0.0015875574101036562	5				NaN	NaN	0	NaN	5140	3632	8773
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8775	27.001	NaN	21944	30	0	3611.9	0.106	+			14316	GSYNKVFLAK	10	72	376.2134671390851	1125.6185720174553	3	376.21331787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSYNKVFLAK_	ENSG00000099341|ENST00000215071|PSMD8;ENST00000592001.5_1_19:38865430-38871817:+|nuORF	84.81729255234993	0.1607459278640679	5				NaN	NaN	0	NaN	5141	3632	8773
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8776	27.003	NaN	2872.8	30	0	671.01	0.106	+			14154	GSMTVVTVK	9	53	461.2570371468904	920.4995213605808	2	461.2567443847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GSMTVVTVK_	ENSG00000001461|ENST00000374399|NIPAL3;nc|ENSG00000001461|Q6P499-2|NIPAL3	80.45461616416974	0.09558281504443908	5				NaN	NaN	0	NaN	5142	3632	8773
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8777	27.005	NaN	2733.3	30	0	332.63	0.106			+	22847	KVIHHHGACV	10	73	550.7919633017049	1099.5693736702096	2	550.7925415039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KVIHHHGACV_	REV__ENSG00000088808|ENST00000202556|PPP1R13B;REV__ENST00000554432.1_1_14:104205014-104205387:-|nuORF;REV__ENST00000555391.5_1_14:104201493-104210315:-|nuORF;REV__ENST00000556334.5_1_14:104201493-104205387:-|nuORF	55.50420428727701	0.4067289358710215	5				NaN	NaN	0	NaN	5143	3632	8773
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8778	27.007	NaN	1149.9	30	0	259.48	0.106			+	28645	NLGRSEIERI	10	45	593.8307395709802	NaN	0	593.8309326171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NLGRSEIERI_	REV__ENSG00000128656|ENST00000409900|CHN1;REV__ENST00000491801.1_1_2:175676203-175677076:-|nuORF;REV__nc|ENSG00000128656|P15882-2|CHN1;REV__nc|ENSG00000128656|P15882-3|CHN1	23.52269567125451	0.42010282974921537	5				NaN	NaN	0	NaN	5144	3632	8773
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8779	27.009	NaN	1117.4	30	0	128.43	0.033	+			49976	WAGGLVAVL	9	39	443.261161978228	NaN	0	443.26153564453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_WAGGLVAVL_	ENST00000356384.4_1_9:137331265-137331760:+|nuORF	39.021493756699265	0.2805557132942146	5				NaN	NaN	0	NaN	5145	3632	8773
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8792	27.036	NaN	11909	30	0	6360.2	0.214			+	9353	EIRPATPAPPA	11	53	373.8768136437994	1118.6086115315982	3	373.876708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EIRPATPAPPA_	REV__ENST00000486888.1_1_3:104221713-104221830:+|nuORF	31.529811441608018	0.6590691889962369	5				NaN	NaN	0	NaN	5155	3635	8791
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8793	27.039	NaN	3317.5	30	0	1265.1	0.106			+	-1	LVLQTMQLL	9	50	537.8128943003027	1073.6112356674053	2	538.3170166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LVLQTM(Oxidation (M))QLL_	REV__ENST00000533090.6_2_11:43852474-43876795:+|nuORF	37.15910966729921	0.4535818937225704	5				NaN	NaN	0	NaN	5156	3635	8791
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8794	27.041	NaN	1704.2	30	0	253.23	0.106	+			42021	SVYTHSYL	8	50	485.23615684247824	NaN	0	485.2353515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVYTHSYL_	ENSG00000188833|ENST00000371506|ENTPD8;nc|ENSG00000188833|Q5MY95-2|ENTPD8	33.51558372728122	1.7418937515398478	5				NaN	NaN	0	NaN	5157	3635	8791
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8795	27.043	NaN	4320.4	30	0	1968.5	0.106			+	45157	TVLTITSTSPS	11	38	369.53653880574876	1105.5877870174463	3	369.5364074707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TVLTITSTSPS_	REV__ENSG00000101040|ENST00000471951|ZMYND8;REV__nc|ENSG00000101040|Q9ULU4-10|ZMYND8;REV__nc|ENSG00000101040|Q9ULU4-11|ZMYND8;REV__nc|ENSG00000101040|Q9ULU4-12|ZMYND8;REV__nc|ENSG00000101040|Q9ULU4-13|ZMYND8;REV__nc|ENSG00000101040|Q9ULU4-14|ZMYND8;REV__nc|ENSG00000101040|Q9ULU4-15|ZMYND8;REV__nc|ENSG00000101040|Q9ULU4-16|ZMYND8;REV__nc|ENSG00000101040|Q9ULU4-17|ZMYND8;REV__nc|ENSG00000101040|Q9ULU4-18|ZMYND8;REV__nc|ENSG00000101040|Q9ULU4-19|ZMYND8;REV__nc|ENSG00000101040|Q9ULU4-2|ZMYND8;REV__nc|ENSG00000101040|Q9ULU4-20|ZMYND8;REV__nc|ENSG00000101040|Q9ULU4-21|ZMYND8;REV__nc|ENSG00000101040|Q9ULU4-22|ZMYND8;REV__nc|ENSG00000101040|Q9ULU4-23|ZMYND8;REV__nc|ENSG00000101040|Q9ULU4-3|ZMYND8;REV__nc|ENSG00000101040|Q9ULU4-4|ZMYND8;REV__nc|ENSG00000101040|Q9ULU4-5|ZMYND8;REV__nc|ENSG00000101040|Q9ULU4-6|ZMYND8;REV__nc|ENSG00000101040|Q9ULU4-8|ZMYND8;REV__nc|ENSG00000101040|Q9ULU4-9|ZMYND8;REV__nc|ENSG00000101040|Q9ULU4|ZMYND8	26.69291269510374	0.70980431218767	5				NaN	NaN	0	NaN	5158	3635	8791
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8796	27.045	NaN	1432.5	30	0	139.82	0.106			+	23496	LAGGPSWSPLA	11	55	528.2782704605095	NaN	0	528.27783203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LAGGPSWSPLA_	REV__ENST00000563517.5_1_15:43663421-43663523:+|nuORF	35.17822180527639	0.40864158092774266	5				NaN	NaN	0	NaN	5159	3635	8791
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8797	27.047	NaN	2056.2	30	0	239.71	0.033	+			48567	VTQALNVL	8	55	429.25846453990994	856.5023761466199	2	429.2579040527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTQALNVL_	ENSG00000106009|ENST00000340611|BRAT1;ENST00000469750.5_1_7:2583168-2595320:-|nuORF;ENST00000493232.5_1_7:2583168-2583660:-|nuORF;nc|ENSG00000106009|Q6PJG6-2|BRAT1	87.75429964447693	0.2842685068779738	5				NaN	NaN	0	NaN	5160	3635	8791
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8810	27.074	NaN	2172.8	30	0	236.29	0.214	+			6663	AYVHMVTHF	9	66	560.7654394269989	1119.5163259207977	2	560.7669067382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_AYVHM(Oxidation (M))VTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	71.37791200682192	0.13483053934309522	5				NaN	NaN	0	NaN	5170	3638	8809
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8811	27.078	NaN	1684.1	30	0	193.58	0.106			+	51233	YPVIGVDLQ	9	54	502.2753210567152	1002.5360891802304	2	502.27557373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YPVIGVDLQ_	REV__ENSG00000095564|ENST00000265990|BTAF1;REV__nc|ENSG00000095564|O14981-2|BTAF1	53.351449002276354	0.2690372970092375	5				NaN	NaN	0	NaN	5171	3638	8809
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8812	27.08	NaN	1615.5	30	0	541.62	0.106			+	10205	ETFPKKIGR	9	31	359.2139892578125	NaN	0	359.2139892578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ETFPKKIGR_	REV__ENSG00000166123|ENST00000340124|GPT2;REV__GPT2|p.G202Afs*8|1|0.19|ENSG00000166123|chr16:46909708-46909708|G/-|frameshift_variant	18.262085536374414	0.37517301184500873	5				NaN	NaN	0	NaN	5172	3638	8809
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8813	27.081	NaN	2047.5	30	0	278.17	0.106			+	35702	SDKMGLEK	8	47	454.2320437500166	NaN	0	454.2320251464844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SDKMGLEK_	REV__ENSG00000169495|ENST00000302495|HTRA4	87.69643885390035	1.7418937515398478	5				NaN	NaN	0	NaN	5173	3638	8809
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8814	27.083	NaN	2294.6	30	0	359.79	0.106			+	24831	LITLRYLD	8	57	503.80000930980003	1005.5854656864001	2	504.3011779785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LITLRYLD_	REV__ENSG00000154358|ENST00000680850|OBSCN;REV__nc|ENSG00000154358|Q5VST9-2|OBSCN;REV__nc|ENSG00000154358|Q5VST9-3|OBSCN;REV__nc|ENSG00000154358|Q5VST9-5|OBSCN;REV__nc|ENSG00000154358|Q5VST9-6|OBSCN;REV__nc|ENSG00000154358|Q5VST9|OBSCN;REV__OBSCN|p.E4688Dfs*35|1|0.03|ENSG00000154358|chr1:228318105-228318106|-/CATCTTC|frameshift_variant;REV__OBSCN|p.E4729Rfs*7|1|0.37|ENSG00000154358|chr1:228318930-228318931|-/C|frameshift_variant;REV__OBSCN|p.G1702Vfs*37|2|0.36|ENSG00000154358|chr1:228268769-228268769|G/-|frameshift_variant;REV__OBSCN|p.H7050Tfs*22|1|0.11|ENSG00000154358|chr1:228371922-228371922|C/-|frameshift_variant;REV__OBSCN|p.P6994Lfs*78|1|0.15|ENSG00000154358|chr1:228371756-228371756|C/-|frameshift_variant;REV__OBSCN|p.S5232Ffs*24|1|0.21|ENSG00000154358|chr1:228332900-228332901|-/T|frameshift_variant;REV__OBSCN|p.V3709Sfs*15|1|0.03|ENSG00000154358|chr1:228293609-228293610|-/A|frameshift_variant	30.503639358989545	0.7238069182250283	5				NaN	NaN	0	NaN	5174	3638	8809
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8815	27.085	NaN	966.61	30	0	152.45	0.034				-1	HHGRCVDG	8	49	469.20630041153106	936.3980478898621	2	469.2059631347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_HHGRC(Carbamidomethyl (C))VDG_	ENSG00000074181|ENST00000263388|NOTCH3;NOTCH3|p.C1344Vfs*76|1|0.14|ENSG00000074181|chr19:15177899-15177899|G/-|frameshift_variant	28.2542754592877	0.7411748056684583	5				NaN	NaN	0	NaN	5175	3638	8809
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8828	27.112	NaN	4911.3	30	0	958.45	0.214	+			40566	SVAECQLMK	9	67	533.2568862061079	1064.4992194790157	2	533.2579956054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SVAEC(Carbamidomethyl (C))QLMK_	ENSG00000105221|ENST00000392038|AKT2;ENST00000391844.8_1_19:40739781-40791100:-|nuORF;ENST00000537834.5_1_19:40745726-40771198:-|nuORF;nc|ENSG00000105221|P31751-2|AKT2	136.26810882979174	0.012230845423532208	5				NaN	NaN	0	NaN	5185	3641	8827
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8829	27.116	NaN	2506	30	0	512.33	0.106				-1	 	0	60	508.77503815998455	1015.5355233867691	2	508.7752685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5186	3641	8827
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8830	27.118	NaN	1850.3	30	0	383.1	0.106				-1	 	0	36	351.19662340617435	700.3786938791487	2	351.1965637207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5187	3641	8827
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8831	27.12	NaN	3719.4	30	0	637.77	0.106	+			6296	AVSTFAMVK	9	60	485.2579050675201	968.5012572018402	2	485.25750732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_AVSTFAM(Oxidation (M))VK_	ENSG00000172893|ENST00000355527|DHCR7;ENST00000534701.1_1_11:71149825-71152361:-|nuORF	79.71258880314673	0.09879134589249085	5				NaN	NaN	0	NaN	5188	3641	8827
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8832	27.121	NaN	3982.2	30	0	1010	0.106	+			1945	AISSTVLGK	9	58	438.2639270746043	874.5133012160086	2	438.2635498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AISSTVLGK_	ENSG00000105976|ENST00000397752|MET;nc|ENSG00000105976|P08581-2|MET	93.19546047674547	0.05585629608842056	5				NaN	NaN	0	NaN	5189	3641	8827
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8833	27.123	NaN	2990.5	30	0	580.91	0.033			+	13481	GLLIVNTK	8	52	429.2763050796972	856.5380572261944	2	429.2763366699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GLLIVNTK_	REV__ENSG00000141698|ENST00000435506|NT5C3B;REV__ENST00000469698.5_1_17:39981777-39991902:-|nuORF;REV__nc|ENSG00000141698|Q969T7-2|NT5C3B	88.64286706044652	0.2815785716369046	5				NaN	NaN	0	NaN	5190	3641	8827
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8844	27.147	NaN	4869.1	30	0	580.66	0.214	+			21231	KLIDRTESL	9	65	537.8128943003027	1073.6112356674053	2	537.8129272460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KLIDRTESL_	ENSG00000130592|ENST00000311604|LSP1;ENST00000485341.5_1_11:1902588-1908790:+|nuORF;nc|ENSG00000130592|P33241-2|LSP1;nc|ENSG00000130592|P33241-3|LSP1	68.84614121027924	0.14577793175421136	5				NaN	NaN	0	NaN	5198	3644	8843
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8845	27.15	NaN	2362.7	30	0	328.7	0.106			+	23858	LDEEEKKN	8	58	502.7486641091521	1003.4827752851043	2	502.7492980957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LDEEEKKN_	REV__ENSG00000136738|ENST00000377524|STAM;REV__nc|ENSG00000136738|Q92783-2|STAM	73.97473282117947	0.3737790450121076	5				NaN	NaN	0	NaN	5199	3644	8843
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8846	27.152	NaN	6230.8	30	0	2364.5	0.106			+	35274	SALSQNNQKL	10	48	368.20030833490597	1101.579095604918	3	368.200439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SALSQNNQKL_	REV__ENSG00000139174|ENST00000345127|PRICKLE1	24.519189625965996	0.6795976720565101	5				NaN	NaN	0	NaN	5200	3644	8843
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8847	27.154	NaN	3371	30	0	711.18	0.106	+			20268	KENIKPQIL	9	43	361.55744304928294	NaN	0	361.55780029296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KENIKPQIL_	DNAH6|p.L3633*|2|0.38|ENSG00000115423|chr2:84784749-84784749|T/-|frameshift_variant;DNAH6|p.S3773Lfs*5|1|0.09|ENSG00000115423|chr2:84796377-84796377|T/-|frameshift_variant;ENSG00000115423|ENST00000389394|DNAH6	42.396135135203025	0.2590952873412954	5				NaN	NaN	0	NaN	5201	3644	8843
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8848	27.156	NaN	2079.2	30	0	224.03	0.106	+			2410	APAPPASQY	9	52	451.22436443471327	900.4341759362266	2	451.7259521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_APAPPASQY_	ENSG00000050820|ENST00000162330|BCAR1;nc|ENSG00000050820|P56945-2|BCAR1;nc|ENSG00000050820|P56945-3|BCAR1;nc|ENSG00000050820|P56945-5|BCAR1;nc|ENSG00000050820|P56945-6|BCAR1;nc|ENSG00000050820|P56945-7|BCAR1;nc|ENSG00000050820|P56945-8|BCAR1	35.61828744233558	0.47037581924408073	5				NaN	NaN	0	NaN	5202	3644	8843
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8849	27.158	NaN	1386.8	30	0	156.84	0.034	+			2000	AKGVTAGITN	10	58	466.2648620605469	NaN	0	466.2648620605469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AKGVTAGITN_	ENST00000332499.3_1_17:43226364-43226442:+|nuORF	51.52775601994872	0.29594378441454594	5				NaN	NaN	0	NaN	5203	3644	8843
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8863	27.188	NaN	16746	30	0	5601.1	0.214	+			6220	AVQTAAKELLK	11	61	391.2400369536572	1170.6982814611715	3	391.23980712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVQTAAKELLK_	ENSG00000123992|ENST00000273075|DNPEP;ENST00000430206.5_1_2:220251659-220252065:-|nuORF;ENST00000460963.5_1_2:220250088-220252486:-|nuORF;ENST00000523527.5_1_2:220250965-220252516:-|nuORF;nc|ENSG00000123992|Q9ULA0-2|DNPEP	52.167168403610894	0.39337392184041037	5				NaN	NaN	0	NaN	5214	3647	8862
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8864	27.191	NaN	1736.7	30	0	193.61	0.106	+			28783	NPENSELKY	9	58	547.2621341999453	1092.5097154666905	2	547.262451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NPENSELKY_	ENSG00000141448|ENST00000269216|GATA6;nc|ENSG00000141448|Q92908-2|GATA6	65.46538089061403	0.16805504838372562	5				NaN	NaN	0	NaN	5215	3647	8862
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8865	27.193	NaN	1976.9	30	0	236.59	0.106			+	25795	LSASTTEGRK	10	61	525.2846848967921	1048.554816860384	2	525.2855224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSASTTEGRK_	REV__ENSG00000146411|ENST00000275230|SLC2A12	41.42661286455405	0.5359995577334734	5				NaN	NaN	0	NaN	5216	3647	8862
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8866	27.195	NaN	2520.2	30	0	782.99	0.106			+	22562	KTSLLPNNILQ	11	62	620.8672486169319	1239.7199443006637	2	620.8672485351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTSLLPNNILQ_	REV__ENST00000555168.1_1_X:119270955-119378696:-|nuORF	40.015381236134715	0.5577325868682684	5				NaN	NaN	0	NaN	5217	3647	8862
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8867	27.197	NaN	900.64	30	0	468.23	0.106				-1	 	0	25	322.1935812844998	642.3726096357997	2	322.1934814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5218	3647	8862
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8868	27.199	NaN	1762.5	30	0	305.75	0.035	+			4779	ATNGPPVLVK	10	55	498.29784389297276	994.5811348527455	2	498.2978820800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATNGPPVLVK_	ENSG00000170004|ENST00000330494|CHD3;ENST00000439235.5_1_17:7812698-7814900:+|nuORF;ENST00000470531.5_3_17:7807732-7814900:+|nuORF;ENST00000481999.1_1_17:7813558-7814900:+|nuORF;nc|ENSG00000170004|Q12873-2|CHD3;nc|ENSG00000170004|Q12873-3|CHD3	74.25504064058377	0.24255678544297835	5				NaN	NaN	0	NaN	5219	3647	8862
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8869	27.199	NaN	1459.7	30	0	186.37	0.139			+	13438	GLHDVAIGE	9	57	455.7349548339844	NaN	0	455.7349548339844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GLHDVAIGE_	REV__ENSG00000116962|ENST00000264187|NID1;REV__nc|ENSG00000116962|P14543-2|NID1	31.954861631926434	0.3162336699109506	5				NaN	NaN	0	NaN	5220	3647	8862
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8880	27.229	NaN	3755.8	30	0	534.98	0.214	+			1830	AIIENMSTK	9	74	503.76603459993885	1005.5175162666777	2	503.76617431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AIIENMSTK_	ENSG00000116729|ENST00000262348|WLS;nc|ENSG00000116729|Q5T9L3-2|WLS;nc|ENSG00000116729|Q5T9L3-3|WLS	60.11826168202944	0.21262886028301267	5				NaN	NaN	0	NaN	5228	3650	8879
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8881	27.232	NaN	1910.5	30	0	160.03	0.106			+	32518	QVQQLLVQ	8	60	478.2827790448767	954.5510051565534	2	478.2825622558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QVQQLLVQ_	REV__HERV1_I-int_dup2|chr3:34679996-34686397:+|1.0948245018220069|0.0565463038051543|4.28|448.0|244|1|anti-sense	55.50420428727701	0.5462892107279674	5				NaN	NaN	0	NaN	5229	3650	8879
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8882	27.234	NaN	1611.3	30	0	201.65	0.106	+			23383	LAADCAHEL	9	53	500.2318669962187	998.4491810592374	2	500.23223876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LAADC(Carbamidomethyl (C))AHEL_	ENSG00000157379|ENST00000288111|DHRS1;ENST00000558340.1_1_14:24760067-24761569:-|nuORF;ENST00000561137.5_1_14:24760413-24761527:-|nuORF;ENST00000561273.5_1_14:24760714-24761569:-|nuORF	51.33545320467046	0.2872990594074956	5				NaN	NaN	0	NaN	5230	3650	8879
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8883	27.236	NaN	1893.5	30	0	155.01	0.106	+			1087	AELATRAL	8	46	422.7481170104837	843.4816810877675	2	422.7483215332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AELATRAL_	ENSG00000173801|ENST00000393931|JUP	69.6276240434122	0.4100012001731381	5				NaN	NaN	0	NaN	5231	3650	8879
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8884	27.238	NaN	2131.6	30	0	449.44	0.106	+			14540	GTDVGTVLK	9	55	445.25343116060566	888.4923093880113	2	445.253173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTDVGTVLK_	ENSG00000012171|ENST00000616701|SEMA3B;ENSG00000075213|ENST00000265362|SEMA3A;ENST00000419007.5_1_3:50311763-50312407:+|nuORF;ENST00000456210.5_1_3:50311877-50313205:+|nuORF;nc|ENSG00000012171|Q13214-2|SEMA3B;SEMA3B|p.R595Afs*16|1|0.43|ENSG00000012171|chr3:50275779-50275779|C/-|frameshift_variant	88.17693792209575	0.07000514020414955	5				NaN	NaN	0	NaN	5232	3650	8879
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8885	27.24	NaN	1094.4	30	0	106.06	0.036			+	19716	KDTERLEGI	9	55	530.7864990234375	NaN	0	530.7864990234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KDTERLEGI_	REV__tr|U7SG99|U7SG99_FUSNUMembranefusionproteinbiotin-lipoyllikedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02230PE=3SV=1	34.172542307311794	0.30503706118289736	5				NaN	NaN	0	NaN	5233	3650	8879
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8886	27.24	NaN	751.4	30	0	55.294	0.139	+			19017	IWGQVGAA	8	37	401.2172546386719	NaN	0	401.2172546386719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IWGQVGAA_	ENST00000219789.10_1_16:29874249-29874522:-|nuORF;ENST00000563893.5_1_16:29872371-29874522:-|nuORF;nc|ENSG00000103502|O14735-2|CDIPT	26.79610172149135	1.7418937515398478	5				NaN	NaN	0	NaN	5234	3650	8879
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8900	27.272	NaN	11065	30	0	4584.1	0.214	+			48696	VTTGSEGLLK	10	68	502.7848165474331	1003.5550801616662	2	502.78515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTTGSEGLLK_	ENSG00000134987|ENST00000513710|WDR36;ENST00000505303.5_1_5:110428043-110447004:+|nuORF;nc|ENSG00000134987|Q8NI36|WDR36	126.24258497203832	0.01851300475414303	5				NaN	NaN	0	NaN	5245	3653	8899
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8901	27.275	NaN	3575.4	30	0	612.82	0.106	+			32698	RAGVFASSLH	10	64	522.7827867147666	1043.5510204963332	2	522.7836303710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RAGVFASSLH_	ENST00000467799.6_1_10:98031253-98031343:-|nuORF	39.252832667884924	0.5560298534376815	5				NaN	NaN	0	NaN	5246	3653	8899
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8902	27.277	NaN	3056.8	30	0	1243.4	0.106	+			33809	RQRDRFTV	8	39	359.8681835690337	1076.5827213073012	3	359.868408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RQRDRFTV_	ENSG00000163395|ENST00000335211|IGFN1;nc|ENSG00000163395|Q86VF2-2|IGFN1;nc|ENSG00000163395|Q86VF2|IGFN1	34.172542307311794	0.6954784234644539	5				NaN	NaN	0	NaN	5247	3653	8899
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8903	27.279	NaN	2125.7	30	0	214.5	0.106			+	31461	QKTRRNQF	8	60	539.2986224106262	1076.5826918880523	2	539.29931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QKTRRNQF_	REV__ENSG00000116035|ENST00000234392|VAX2;REV__ENSG00000148704|ENST00000369206|VAX1	45.9519527083369	0.6193794311207887	5				NaN	NaN	0	NaN	5248	3653	8899
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8904	27.281	NaN	1374.9	30	0	280.75	0.106			+	13510	GLPLTDGVCV	10	54	487.25459336985364	972.4946338065073	2	487.2544250488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GLPLTDGVCV_	REV__ENST00000419474.4_1_14:24000754-24000877:-|nuORF	23.04248740728303	0.69165701907106	5				NaN	NaN	0	NaN	5249	3653	8899
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8905	27.283	NaN	2585.8	30	0	459.09	0.035	+			39300	STASMGGWTK	10	64	513.2398547535669	1024.4651565739337	2	513.2395629882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STASMGGWTK_	ENSG00000166348|ENST00000687698|USP54;ENST00000498143.5_1_10:75279553-75335416:-|nuORF;nc|ENSG00000166348|Q70EL1-6|USP54;nc|ENSG00000166348|Q70EL1-7|USP54;USP54|p.R831Tfs*6|1|0.07|ENSG00000166348|chr10:73519973-73519983|CAGGGCAAGTC/-|frameshift_variant	58.2462437865262	0.38179041844353556	5				NaN	NaN	0	NaN	5250	3653	8899
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8906	27.283	NaN	2128.5	30	0	654.64	0.145	+			17957	IGSFLLWYFV	10	37	415.56369270944117	NaN	0	415.5635681152344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IGSFLLWYFV_	ENSG00000165120|ENST00000297819|SSMEM1;SSMEM1|p.K67Rfs*11|1|0.13|ENSG00000165120|chr7:130213492-130213492|A/-|frameshift_variant	29.170058357718403	0.40439580130713204	5				NaN	NaN	0	NaN	5251	3653	8899
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8919	27.314	NaN	9248.5	30	0	4774.5	0.214				-1	VTIMANLK	8	65	453.2596269705431	904.5047010078862	2	453.2596130371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_VTIM(Oxidation (M))ANLK_	ENSG00000198910|ENST00000370060|L1CAM;nc|ENSG00000198910|P32004-2|L1CAM;nc|ENSG00000198910|P32004-3|L1CAM	71.29570347882199	0.39610197767395533	5				NaN	NaN	0	NaN	5261	3656	8918
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8920	27.317	NaN	2588.6	30	0	263.96	0.106	+			6616	AYQKVVAGV	9	60	467.77157072214777	933.5285885110956	2	467.77142333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AYQKVVAGV_	ENSG00000223609|ENST00000650601|HBD;ENSG00000244734|ENST00000335295|HBB	106.41520541750704	0.03265588207292361	5				NaN	NaN	0	NaN	5262	3656	8918
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8921	27.319	NaN	4503	30	0	747.46	0.106	+			16217	HEDKIRVVL	9	53	370.2205075438133	1107.63969323164	3	370.22076416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HEDKIRVVL_	EHD1|p.E248Rfs*50|1|0.19|ENSG00000110047|chr11:64860098-64860098|G/-|frameshift_variant;ENSG00000024422|ENST00000263277|EHD2;ENSG00000110047|ENST00000320631|EHD1;nc|ENSG00000024422|Q9NZN4-2|EHD2	31.954861631926434	0.5046124803899898	5				NaN	NaN	0	NaN	5263	3656	8918
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8922	27.321	NaN	3470.3	30	0	1003.3	0.106			+	31791	QPLLQQSG	8	49	435.7376425318581	869.4607321305162	2	435.7373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QPLLQQSG_	REV__ENST00000559694.5_1_14:24526437-24530034:+|nuORF	51.19269402634007	0.5868595481438337	5				NaN	NaN	0	NaN	5264	3656	8918
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8923	27.323	NaN	3121.5	30	0	539.28	0.106	+			36500	SEYIHAQVA	9	62	509.25380840430887	1016.4930638754178	2	509.25445556640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SEYIHAQVA_	ENSG00000122642|ENST00000242209|FKBP9;ENST00000455909.5_1_7:55750344-55756724:-|nuORF;ENST00000471066.1_1_7:33042511-33044960:+|nuORF;ENST00000475220.1_1_7:33038205-33044960:+|nuORF;nc|ENSG00000122642|O95302-2|FKBP9;nc|ENSG00000122642|O95302-3|FKBP9;nc|ENSG00000291029|Q75LS8|FKBP9P1	77.31757898189308	0.1091473830098891	5				NaN	NaN	0	NaN	5265	3656	8918
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8924	27.325	NaN	1413.7	30	0	369.65	0.035	+			50250	WPRGLRPP	8	58	489.7853149660012	NaN	0	489.78497314453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_WPRGLRPP_	ENST00000562156.5_1_16:68573203-68591907:+|nuORF;ENST00000570495.5_1_16:68573279-68591907:+|nuORF;ENST00000573685.5_1_16:68573279-68591907:+|nuORF	50.0245360154114	1.7418937515398478	5				NaN	NaN	0	NaN	5266	3656	8918
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8925	27.325	NaN	1810	30	0	160.6	0.141	+			16218	HEDKIRVVL	9	64	554.8283081054688	NaN	0	554.8283081054688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HEDKIRVVL_	EHD1|p.E248Rfs*50|1|0.19|ENSG00000110047|chr11:64860098-64860098|G/-|frameshift_variant;ENSG00000024422|ENST00000263277|EHD2;ENSG00000110047|ENST00000320631|EHD1;nc|ENSG00000024422|Q9NZN4-2|EHD2	35.15202426646627	0.3000918603816441	5				NaN	NaN	0	NaN	5267	3656	8918
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8938	27.355	NaN	6408.3	30	0	658.59	0.214	+			23250	KYINTDAKF	9	67	550.2927357832887	1098.5709186333772	2	550.293701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KYINTDAKF_	ENSG00000100991|ENST00000252015|TRPC4AP;nc|ENSG00000100991|Q8TEL6-3|TRPC4AP	104.01359247289065	0.03510646158778409	5				NaN	NaN	0	NaN	5277	3659	8937
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8939	27.358	NaN	5952.1	30	0	687.16	0.106	+			15672	GVMRVGLVAK	10	59	515.3156625793331	1028.616772225466	2	515.31591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GVMRVGLVAK_	ENSG00000129351|ENST00000588657|ILF3;ENST00000587928.5_1_19:10781281-10792148:+|nuORF;nc|ENSG00000129351|Q12906-2|ILF3;nc|ENSG00000129351|Q12906-3|ILF3;nc|ENSG00000129351|Q12906-4|ILF3;nc|ENSG00000129351|Q12906-5|ILF3;nc|ENSG00000129351|Q12906-6|ILF3;nc|ENSG00000129351|Q12906|ILF3	85.16082228582465	0.15877915086237185	5				NaN	NaN	0	NaN	5278	3659	8937
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8940	27.36	NaN	2825.5	30	0	142.15	0.106	+			50702	YEEQKNSF	8	67	522.7363520221788	1043.4581511111576	2	522.7408447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YEEQKNSF_	ENSG00000187944|ENST00000342506|C2orf66;nc|nan|Q6UXQ4|C2orf66	69.6276240434122	0.4100012001731381	5				NaN	NaN	0	NaN	5279	3659	8937
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8941	27.362	NaN	2018.3	30	0	175.14	0.106	+			24041	LEGIFPAAL	9	59	465.7664556970141	NaN	0	465.7660217285156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LEGIFPAAL_	ENSG00000173653|ENST00000309657|RCE1;ENST00000533277.5_1_11:66611269-66612734:+|nuORF	40.5726180659479	0.27166212580479165	5				NaN	NaN	0	NaN	5280	3659	8937
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8942	27.364	NaN	1451.6	30	0	341.22	0.106	+			16894	HPIKQVDVL	9	56	524.8119505540984	NaN	0	524.8112182617188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HPIKQVDVL_	ENSG00000107960|ENST00000224950|STN1	51.19269402634007	0.19847346126499396	5				NaN	NaN	0	NaN	5281	3659	8937
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8943	27.366	NaN	989.87	30	0	69.737	0.034	+			29548	PEPEGTLPA	9	54	455.72978832067054	909.4450237081411	2	455.7298278808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PEPEGTLPA_	ENSG00000154099|ENST00000378553|DNAAF1;nc|ENSG00000154099|Q8NEP3-2|DNAAF1	26.79610172149135	0.5528238334041078	5				NaN	NaN	0	NaN	5282	3659	8937
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8944	27.366	NaN	1711.8	30	0	167.65	0.139				-1	LHCLPCPL	8	57	476.7397730381323	NaN	0	476.73931884765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_LHCLPC(Carbamidomethyl (C))PL_	ENST00000291041.5_1_16:67961537-67962017:+|nuORF	33.49298260027079	1.7418937515398478	5				NaN	NaN	0	NaN	5283	3659	8937
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8958	27.398	NaN	3572	30	0	668.11	0.214	+			42315	TAFGHPQAY	9	60	496.2353420079988	990.4561310827976	2	496.23504638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAFGHPQAY_	ENSG00000130340|ENST00000392185|SNX9	71.87747018426188	0.13267044672804276	5				NaN	NaN	0	NaN	5294	3662	8957
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8959	27.402	NaN	3072.7	30	0	603.18	0.106	+			21963	KSDHPGISI	9	60	477.25699071741485	952.4994285016297	2	477.2560119628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KSDHPGISI_	ENSG00000149136|ENST00000278412|SSRP1;ENST00000293880.9_1_11:57094898-57095944:-|nuORF	60.11826168202944	0.21262886028301267	5				NaN	NaN	0	NaN	5295	3662	8957
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8960	27.404	NaN	1552.8	30	0	135.97	0.106			+	11169	FGPPVPLEAF	10	69	537.2881798417386	NaN	0	537.2877807617188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FGPPVPLEAF_	REV__CC2D1B|p.F769Afs*5|1|0.54|ENSG00000154222|chr1:52354893-52354894|-/CC|frameshift_variant;REV__CC2D1B|p.L517Cfs*53|1|0.58|ENSG00000154222|chr1:52357829-52357829|G/-|frameshift_variant;REV__ENSG00000154222|ENST00000284376|CC2D1B;REV__ENST00000460261.5_1_1:52822810-52825784:-|nuORF;REV__ENST00000491136.6_1_1:52823963-52826194:-|nuORF;REV__nc|ENSG00000154222|Q5T0F9-3|CC2D1B;REV__nc|ENSG00000154222|Q5T0F9|CC2D1B	45.9519527083369	0.331194823726099	5				NaN	NaN	0	NaN	5296	3662	8957
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8961	27.405	NaN	2546.5	30	0	380.44	0.106	+			1167	AENGKSNFL	9	64	490.2460640246912	978.4775751161824	2	490.245361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AENGKSNFL_	B2M|p.V69Sfs*21|1|0.67|ENSG00000166710|chr15:44715554-44715555|-/A|frameshift_variant;B2M|p.V69Wfs*34|1|0.32|ENSG00000166710|chr15:44715555-44715555|A/-|frameshift_variant;B2M|p.Y98Lfs*5|1|0.08|ENSG00000166710|chr15:44715648-44715648|A/-|frameshift_variant;ENSG00000166710|ENST00000648006|B2M;ENST00000559720.5_1_15:45003705-45007919:+|nuORF	58.2462437865262	0.22823408064396822	5				NaN	NaN	0	NaN	5297	3662	8957
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8962	27.407	NaN	2477.5	30	0	386.88	0.036			+	17323	IAGLGHHHQL	10	63	541.7959156605492	1081.5772783878983	2	541.7963256835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IAGLGHHHQL_	REV__ENST00000401766.6_2_17:28545150-28545855:-|nuORF	68.484700416344	0.2896999678166231	5				NaN	NaN	0	NaN	5298	3662	8957
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8976	27.437	NaN	4778	30	0	727.46	0.214	+			38812	SSMVFTTSK	9	69	494.24453526120635	986.4745175892127	2	494.244873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSMVFTTSK_	ENSG00000112818|ENST00000230588|MEP1A	78.26377905018397	0.10505600812668463	5				NaN	NaN	0	NaN	5309	3665	8975
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8977	27.441	NaN	2681.8	30	0	1471.1	0.106			+	23706	LAVAADGRL	9	52	443.2616772509443	884.5088015686886	2	443.2615051269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LAVAADGRL_	REV__ENSG00000124839|ENST00000264601|RAB17;REV__ENST00000466244.1_1_2:238483664-238484282:-|nuORF;REV__nc|ENSG00000124839|Q9H0T7-2|RAB17	37.15910966729921	0.4535818937225704	5				NaN	NaN	0	NaN	5310	3665	8975
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8978	27.443	NaN	556.59	30	0	37.361	0.106			+	30090	PQSPLSNT	8	41	422.2140084124665	842.413463891733	2	422.2148132324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PQSPLSNT_	REV__ENST00000517914.1_1_8:25314857-25314992:-|nuORF	35.61828744233558	0.6843154725607303	5				NaN	NaN	0	NaN	5311	3665	8975
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8979	27.445	NaN	1478.2	30	0	254.42	0.106	+			47897	VSLKQVEKY	9	56	547.3174525955109	NaN	0	547.3175048828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSLKQVEKY_	ENSG00000183655|ENST00000337975|KLHL25;KLHL25|p.E514Gfs*5|1|0.18|ENSG00000183655|chr15:85768252-85768270|CGCGTCCACTGGTTGGTCT/-|frameshift_variant	35.17822180527639	0.29995959445402404	5				NaN	NaN	0	NaN	5312	3665	8975
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8980	27.447	NaN	1610.8	30	0	182.86	0.106	+			15059	GTNVMVTVAK	10	58	510.2812427177787	1018.5479325023574	2	510.2820739746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTNVMVTVAK_	ENSG00000101294|ENST00000398174|HM13;ENST00000460389.5_1_20:30136650-30157019:+|nuORF;ENST00000464173.5_1_20:30136866-30137929:+|nuORF;ENST00000472128.5_1_20:30136905-30155443:+|nuORF;ENST00000483310.5_1_20:30136863-30150236:+|nuORF;ENST00000492709.5_1_20:30132820-30157019:+|nuORF;nc|ENSG00000101294|Q8TCT9-4|HM13;nc|ENSG00000101294|Q8TCT9-5|HM13;nc|ENSG00000101294|Q8TCT9|HM13	43.41853373365257	0.517645004642704	5				NaN	NaN	0	NaN	5313	3665	8975
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8981	27.448	NaN	4005.1	30	0	1798.9	0.039	+			41407	SVMRPEQIMK	10	40	406.88253475857687	1217.6257748759306	3	407.2172546386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVMRPEQIMK_	ENSG00000185883|ENST00000330398|ATP6V0C	32.75053402867276	0.6123771875927935	5				NaN	NaN	0	NaN	5314	3665	8975
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8994	27.476	NaN	14934	30	0	9256.7	0.214	+			287	AAPAYSRAL	9	63	460.25329275433353	918.4920325754671	2	460.2536315917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAPAYSRAL_	ENSG00000106211|ENST00000248553|HSPB1	77.31757898189308	0.1091473830098891	5				NaN	NaN	0	NaN	5324	3668	8993
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8995	27.48	NaN	4608.2	30	0	363.05	0.106	+			15332	GTVIVDSTVGK	11	67	538.3033994435726	1074.5922459539452	2	538.304443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTVIVDSTVGK_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	100.08592035916087	0.060509483168783906	5				NaN	NaN	0	NaN	5325	3668	8993
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8996	27.482	NaN	1515	30	0	129.03	0.106	+			45696	VAAGSYQRF	9	58	499.756279343616	997.498005754032	2	499.7557373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VAAGSYQRF_	ENSG00000160783|ENST00000368277|PMF1;nc|ENSG00000160783|Q6P1K2-3|PMF1;nc|ENSG00000160783|Q6P1K2-4|PMF1;nc|ENSG00000160783|Q6P1K2-5|PMF1;nc|ENSG00000160783|Q6P1K2-6|PMF1	87.69643885390035	0.07135982304947239	5				NaN	NaN	0	NaN	5326	3668	8993
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8997	27.484	NaN	1132.1	30	0	229.13	0.106				-1	 	0	42	418.75525177677935	835.4959506203587	2	418.7552490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5327	3668	8993
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8998	27.485	NaN	1329.3	30	0	736.83	0.106	+			13835	GQSKIPVKK	9	23	328.87821741669467	983.612822850284	3	328.878173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GQSKIPVKK_	ANK3|p.R2745K|1|0.4|ENSG00000151150|chr10:60072647-60072647|C/T|missense_variant	16.473147378115264	0.6112419832031293	5				NaN	NaN	0	NaN	5328	3668	8993
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8999	27.487	NaN	2061.5	30	0	98.561	0.035	+			46301	VEKEGIHVL	9	58	512.2958252006424	NaN	0	512.2968139648438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VEKEGIHVL_	chr1:31911841-31915895|139|19.5|0.0|20.89|-|0|None,PTP4A2|1;ENSG00000112245|ENST00000626021|PTP4A1;ENSG00000184007|ENST00000647444|PTP4A2;ENST00000484483.1_1_1:32381486-32384666:-|nuORF;nc|ENSG00000184007|Q12974-2|PTP4A2;nc|ENSG00000184007|Q12974-4|PTP4A2	63.53385203322761	0.134247007536971	5				NaN	NaN	0	NaN	5329	3668	8993
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9000	27.488	NaN	1168.7	30	0	418.64	0.139			+	13559	GLSSVEKQP	9	39	472.756129199909	NaN	0	472.756103515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GLSSVEKQP_	REV__ENST00000464900.5_1_X:46306754-46307940:+|nuORF	20.94693142431847	0.3660861156085067	5				NaN	NaN	0	NaN	5330	3668	8993
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9012	27.516	NaN	6497.9	30	0	1672.3	0.214	+			39749	STITGVMDK	9	61	476.2441047990982	950.4736566649964	2	476.2439880371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STITGVMDK_	ENSG00000147872|ENST00000276914|PLIN2;PLIN2|p.V348*|1|0.15|ENSG00000147872|chr9:19116520-19116520|C/-|frameshift_variant	112.10723106719422	0.02684780151337622	5				NaN	NaN	0	NaN	5339	3671	9011
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9013	27.519	NaN	2455.5	30	0	329.56	0.106	+			23440	LADHTVHVL	9	55	502.77981640362697	1003.545079874054	2	502.779541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LADHTVHVL_	ARHGAP11A|p.L629Ifs*3|1|0.21|ENSG00000198826|chr15:32636653-32636654|-/A|frameshift_variant;ARHGAP11A|p.T646Lfs*6|1|0.08|ENSG00000198826|chr15:32636708-32636709|-/CTTTC|frameshift_variant;ENSG00000198826|ENST00000361627|ARHGAP11A;ENST00000564902.5_1_15:30917016-30927830:+|nuORF;ENST00000566362.1_1_15:30922935-30927517:+|nuORF;ENST00000568574.1_1_15:30926543-30927454:+|nuORF;nc|ENSG00000198826|Q6P4F7-2|ARHGAP11A;nc|ENSG00000285077|Q3KRB8|ARHGAP11B	71.29570347882199	0.13518600952103718	5				NaN	NaN	0	NaN	5340	3671	9011
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9014	27.521	NaN	1734.3	30	0	515.16	0.106	+			10845	FASQQGMTA	9	56	470.71324055764245	939.4119281820849	2	470.7127990722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FASQQGMTA_	ENSG00000130176|ENST00000252456|CNN1;nc|ENSG00000130176|P51911-2|CNN1	53.08895987439943	0.27122541748218487	5				NaN	NaN	0	NaN	5341	3671	9011
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9015	27.523	NaN	2511.9	30	0	744.32	0.106	+			29403	PASHLPVG	8	43	389.21653305953544	776.4185131858709	2	389.21649169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PASHLPVG_	ENSG00000148541|ENST00000618804|FAM13C;nc|ENSG00000148541|Q8NE31-3|FAM13C;nc|ENSG00000148541|Q8NE31-4|FAM13C;nc|ENSG00000148541|Q8NE31-5|FAM13C	29.841539824830324	0.7289191502596711	5				NaN	NaN	0	NaN	5342	3671	9011
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9016	27.525	NaN	2226.9	30	0	178.86	0.106	+			50693	YEENSHLTSV	10	57	589.7700894974471	1177.525626061694	2	589.7698974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YEENSHLTSV_	ENSG00000157557|ENST00000360938|ETS2	96.66504779109242	0.09291513985748291	5				NaN	NaN	0	NaN	5343	3671	9011
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9017	27.527	NaN	2639.8	30	0	194.49	0.035	+			46360	VEKQPPQVL	9	59	519.3030383070467	1036.5915236808933	2	519.3029174804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VEKQPPQVL_	ENSG00000166888|ENST00000300134|STAT6;nc|ENSG00000166888|P42226-2|STAT6;nc|ENSG00000166888|P42226-3|STAT6;STAT6|p.G815Efs*27|3|0.31|ENSG00000166888|chr12:57096672-57096672|C/-|frameshift_variant	54.722347961057174	0.257609425301511	5				NaN	NaN	0	NaN	5344	3671	9011
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9018	27.527	NaN	639.06	30	0	63.511	0.142			+	-1	RMDTEAFKK	9	37	571.2852783203125	NaN	0	571.2852783203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_RM(Oxidation (M))DTEAFKK_	REV__ENSG00000165300|ENST00000683689|SLITRK5;REV__nc|ENSG00000165300|O94991-2|SLITRK5;REV__SLITRK5|p.A906Qfs*20|1|0.09|ENSG00000165300|chr13:87678100-87678100|G/-|frameshift_variant;REV__SLITRK5|p.H899Ifs*27|1|0.27|ENSG00000165300|chr13:87678079-87678079|C/-|frameshift_variant;REV__SLITRK5|p.Y855Tfs*5|1|0.21|ENSG00000165300|chr13:87677948-87677948|T/-|frameshift_variant	24.519189625965996	0.35377483217337163	5				NaN	NaN	0	NaN	5345	3671	9011
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9032	27.559	NaN	10462	30	0	1536.4	0.214	+			10657	EYQKVGQSF	9	69	543.2668745886187	1084.5191962440374	2	543.2675170898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EYQKVGQSF_	ENSG00000178996|ENST00000381410|SNX18;nc|ENSG00000178996|Q96RF0-3|SNX18;nc|ENSG00000178996|Q96RF0|SNX18	145.15565482312357	0.00806134135205793	5				NaN	NaN	0	NaN	5356	3674	9031
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9033	27.563	NaN	2515.1	30	0	521.16	0.106	+			4153	ATESGMLYH	9	58	504.7264246236988	1007.4382963141976	2	504.7262268066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATESGMLYH_	ENSG00000108559|ENST00000573584|NUP88;ENST00000574867.5_1_17:5292093-5322970:-|nuORF	63.30626980617807	0.18605348971131092	5				NaN	NaN	0	NaN	5357	3674	9031
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9034	27.565	NaN	2917.7	30	0	1671.2	0.106	+			10434	EVKTVTVKI	9	35	339.54982185731916	1015.6276361721575	3	339.5496826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EVKTVTVKI_	ENSG00000128918|ENST00000249750|ALDH1A2;ENSG00000165092|ENST00000297785|ALDH1A1;nc|ENSG00000128918|O94788-2|ALDH1A2;nc|ENSG00000128918|O94788-3|ALDH1A2;nc|ENSG00000128918|O94788-4|ALDH1A2	21.9598887501803	0.5980208138527809	5				NaN	NaN	0	NaN	5358	3674	9031
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9035	27.567	NaN	1488.4	30	0	232.43	0.106	+			17177	HTQIDEQI	8	53	492.2429675859452	982.4713822386905	2	492.24267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HTQIDEQI_	tr|U7SUI5|U7SUI5_FUSNUTIGR01212familyradicalSAMproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01174PE=4SV=1	44.116797842482775	0.6307669463330267	5				NaN	NaN	0	NaN	5359	3674	9031
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9036	27.568	NaN	4127.5	30	0	633.35	0.106	+			20238	KELTIGSKL	9	65	494.805548535122	987.596544137044	2	494.8046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KELTIGSKL_	ENSG00000197956|ENST00000368719|S100A6	74.1650062923329	0.12277912660386392	5				NaN	NaN	0	NaN	5360	3674	9031
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9037	27.57	NaN	895.22	30	0	123.93	0.033			+	44007	TPIHEPAL	8	45	439.2430114746094	NaN	0	439.2430114746094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TPIHEPAL_	REV__CACNA1C|p.A2072Pfs*18|1|0.55|ENSG00000151067|chr12:2688729-2688729|G/-|frameshift_variant;REV__CACNA1C|p.E1194Gfs*8|1|0.17|ENSG00000151067|chr12:2608669-2608670|-/G|frameshift_variant;REV__CACNA1C|p.P2073Qfs*17|1|0.21|ENSG00000151067|chr12:2688733-2688733|C/-|frameshift_variant;REV__ENSG00000151067|ENST00000399655|CACNA1C;REV__nc|ENSG00000151067|Q13936-10|CACNA1C;REV__nc|ENSG00000151067|Q13936-11|CACNA1C;REV__nc|ENSG00000151067|Q13936-13|CACNA1C;REV__nc|ENSG00000151067|Q13936-14|CACNA1C;REV__nc|ENSG00000151067|Q13936-15|CACNA1C;REV__nc|ENSG00000151067|Q13936-16|CACNA1C;REV__nc|ENSG00000151067|Q13936-17|CACNA1C;REV__nc|ENSG00000151067|Q13936-18|CACNA1C;REV__nc|ENSG00000151067|Q13936-19|CACNA1C;REV__nc|ENSG00000151067|Q13936-2|CACNA1C;REV__nc|ENSG00000151067|Q13936-20|CACNA1C;REV__nc|ENSG00000151067|Q13936-21|CACNA1C;REV__nc|ENSG00000151067|Q13936-22|CACNA1C;REV__nc|ENSG00000151067|Q13936-23|CACNA1C;REV__nc|ENSG00000151067|Q13936-24|CACNA1C;REV__nc|ENSG00000151067|Q13936-25|CACNA1C;REV__nc|ENSG00000151067|Q13936-26|CACNA1C;REV__nc|ENSG00000151067|Q13936-27|CACNA1C;REV__nc|ENSG00000151067|Q13936-28|CACNA1C;REV__nc|ENSG00000151067|Q13936-29|CACNA1C;REV__nc|ENSG00000151067|Q13936-3|CACNA1C;REV__nc|ENSG00000151067|Q13936-30|CACNA1C;REV__nc|ENSG00000151067|Q13936-31|CACNA1C;REV__nc|ENSG00000151067|Q13936-32|CACNA1C;REV__nc|ENSG00000151067|Q13936-33|CACNA1C;REV__nc|ENSG00000151067|Q13936-34|CACNA1C;REV__nc|ENSG00000151067|Q13936-35|CACNA1C;REV__nc|ENSG00000151067|Q13936-36|CACNA1C;REV__nc|ENSG00000151067|Q13936-37|CACNA1C;REV__nc|ENSG00000151067|Q13936-4|CACNA1C;REV__nc|ENSG00000151067|Q13936-5|CACNA1C;REV__nc|ENSG00000151067|Q13936-6|CACNA1C;REV__nc|ENSG00000151067|Q13936-7|CACNA1C;REV__nc|ENSG00000151067|Q13936-8|CACNA1C;REV__nc|ENSG00000151067|Q13936-9|CACNA1C;REV__nc|ENSG00000151067|Q13936|CACNA1C	31.954861631926434	1.7418937515398478	5				NaN	NaN	0	NaN	5361	3674	9031
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9050	27.598	NaN	2165.3	30	0	349.74	0.214	+			50898	YGAVPSGF	8	45	399.1951331618	796.3757133904	2	399.1946716308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YGAVPSGF_	DOK7|p.S422Hfs*34|2|0.24|ENSG00000175920|chr4:3493243-3493243|C/-|frameshift_variant;ENSG00000175920|ENST00000340083|DOK7;nc|ENSG00000175920|Q18PE1-3|DOK7;nc|ENSG00000175920|Q18PE1-4|DOK7	37.028477286268924	0.6747514403204248	5				NaN	NaN	0	NaN	5371	3677	9049
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9051	27.602	NaN	2448.6	30	0	370.24	0.106	+			30602	QAQPPQSLS	9	54	478.24620812637994	954.4778633195599	2	478.24517822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QAQPPQSLS_	ENSG00000015133|ENST00000389857|CCDC88C;nc|ENSG00000015133|Q9P219-2|CCDC88C;nc|ENSG00000015133|Q9P219-3|CCDC88C	56.72105179125745	0.24094814563026265	5				NaN	NaN	0	NaN	5372	3677	9049
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9052	27.604	NaN	3777.8	30	0	990.79	0.106	+			5295	ATVKASIISEL	11	45	377.89201670991827	1130.654220729955	3	377.89178466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATVKASIISEL_	ENSG00000161681|ENST00000293441|SHANK1;nc|ENSG00000161681|Q9Y566-2|SHANK1;nc|ENSG00000161681|Q9Y566-3|SHANK1;SHANK1|p.L2065Sfs*68|1|0.18|ENSG00000161681|chr19:50662259-50662259|C/-|frameshift_variant	36.31764250033197	0.6083289427130232	5				NaN	NaN	0	NaN	5373	3677	9049
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9053	27.606	NaN	1341.7	30	0	186.05	0.106	+			1405	AEVTKVVV	8	42	422.7607557732281	843.5069586132562	2	422.7601318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEVTKVVV_	ENSG00000167325|ENST00000300738|RRM1	49.44154591367651	0.597725784090933	5				NaN	NaN	0	NaN	5374	3677	9049
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9054	27.607	NaN	1648.1	30	0	215.96	0.106	+			15850	GWVSSSLTLK	10	57	539.2986224106262	1076.5826918880523	2	539.7994384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GWVSSSLTLK_	BCAM|p.G576Afs*20|1|0.34|ENSG00000187244|chr19:44819686-44819686|G/-|frameshift_variant;ENSG00000187244|ENST00000270233|BCAM	34.172542307311794	0.6007644933930345	5				NaN	NaN	0	NaN	5375	3677	9049
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9055	27.609	NaN	2312.7	30	0	343.96	0.035	+			34154	RSYSPDHR	8	60	509.2477167861262	1016.4808806390524	2	509.244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RSYSPDHR_	ENSG00000011007|ENST00000613537|ELOA;nc|ENSG00000011007|Q14241-1|ELOA;TCEB3|p.N465Kfs*2|1|0.27|ENSG00000011007|chr1:23751913-23751914|-/A|frameshift_variant;TCEB3|p.N587Tfs*32|1|0.47|ENSG00000011007|chr1:23754240-23754240|A/-|frameshift_variant	34.172542307311794	0.6954784234644539	5				NaN	NaN	0	NaN	5376	3677	9049
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9069	27.64	NaN	5190.2	30	0	1343	0.214	+			48925	VVDQTTLMK	9	66	517.7815924394779	1033.5486319457557	2	517.7817993164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVDQTTLMK_	ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;TRRAP-ASNS|1|fusion;TRRAP-ASNS|2|fusion;TRRAP|p.A1620Cfs*35|1|0.27|ENSG00000196367|chr7:98949499-98949500|-/G|frameshift_variant;TRRAP|p.I564Hfs*9|1|0.29|ENSG00000196367|chr7:98910389-98910390|-/G|frameshift_variant;TRRAP|p.K3443Sfs*19|1|0.28|ENSG00000196367|chr7:99004246-99004246|A/-|frameshift_variant;TRRAP|p.L291*|1|0.36|ENSG00000196367|chr7:98900691-98900691|T/-|frameshift_variant;TRRAP|p.P1292Lfs*17|1|0.44|ENSG00000196367|chr7:98933258-98933258|C/-|frameshift_variant;TRRAP|p.P1360Afs*14|1|0.05|ENSG00000196367|chr7:98935641-98935642|-/GCAAATAA|frameshift_variant	106.88024417677582	0.032181361622142884	5				NaN	NaN	0	NaN	5387	3680	9068
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9070	27.643	NaN	2005.3	30	0	333.27	0.106			+	46765	VGTPIKQPP	9	51	468.7793634718394	935.5441740104789	2	468.7793273925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VGTPIKQPP_	REV__nc|ENSG809|P63128|ERVK-9_pol	42.396135135203025	0.392153681582562	5				NaN	NaN	0	NaN	5388	3680	9068
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9071	27.645	NaN	1018.2	30	0	328.86	0.106			+	45127	TVKLLLIW	8	28	329.2198353011454	NaN	0	329.2197570800781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVKLLLIW_	REV__nc|ENSG00000181355|Q8IZS5-2|OFCC1;REV__nc|ENSG00000181355|Q8IZS5|OFCC1	8.822329726475273	1.7418937515398478	5				NaN	NaN	0	NaN	5389	3680	9068
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9072	27.647	NaN	2162.2	30	0	341.29	0.106	+			24570	LGNIHHKPG	9	61	486.772224289707	971.5298956462141	2	486.2978210449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LGNIHHKPG_	ENSG00000186868|ENST00000262410|MAPT;ENST00000576518.1_1_17:44055640-44101534:+|nuORF;nc|ENSG00000186868|P10636-2|MAPT;nc|ENSG00000186868|P10636-3|MAPT;nc|ENSG00000186868|P10636-4|MAPT;nc|ENSG00000186868|P10636-5|MAPT;nc|ENSG00000186868|P10636-6|MAPT;nc|ENSG00000186868|P10636-7|MAPT;nc|ENSG00000186868|P10636-8|MAPT;nc|ENSG00000186868|P10636-9|MAPT;nc|ENSG00000186868|P10636|MAPT	45.9519527083369	0.35044536499095585	5				NaN	NaN	0	NaN	5390	3680	9068
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9073	27.649	NaN	1114	30	0	89.431	0.106			+	51052	YLFRLPLE	8	56	525.8045186388687	NaN	0	525.804931640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YLFRLPLE_	REV__nc|ENSG00000175746|Q8N8G6|LINC02915	42.47446043378293	1.7418937515398478	5				NaN	NaN	0	NaN	5391	3680	9068
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9074	27.651	NaN	1225.7	30	0	106.22	0.035			+	-1	LGLNPLCVN	9	49	500.26815514988544	NaN	0	500.2684020996094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_LGLNPLC(Carbamidomethyl (C))VN_	REV__CLMP|p.T150Lfs*74|1|0.04|ENSG00000166250|chr11:123083788-123083788|T/-|frameshift_variant;REV__ENST00000448775.3_1_11:122953804-122954459:-|nuORF	29.14955571784316	0.3303970763161698	5				NaN	NaN	0	NaN	5392	3680	9068
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9088	27.682	NaN	10051	30	0	2129.6	0.214	+			15245	GTTAVFINK	9	63	475.7688478808885	949.523142828577	2	475.76934814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTTAVFINK_	ASH1L|p.H1793Ifs*7|1|0.13|ENSG00000116539|chr1:155438778-155438778|G/-|frameshift_variant;ASH1L|p.I970Lfs*9|1|0.2|ENSG00000116539|chr1:155479962-155479962|T/-|frameshift_variant;ASH1L|p.K1222Rfs*11|4|0.27|ENSG00000116539|chr1:155479205-155479205|T/-|frameshift_variant;ASH1L|p.K1533Sfs*17|1|0.25|ENSG00000116539|chr1:155478272-155478272|T/-|frameshift_variant;ASH1L|p.K2377Nfs*5|1|0.28|ENSG00000116539|chr1:155354570-155354570|T/-|frameshift_variant;ASH1L|p.N1822Tfs*2|1|0.33|ENSG00000116539|chr1:155438690-155438690|T/-|frameshift_variant;ASH1L|p.R712Efs*23|3|0.35|ENSG00000116539|chr1:155480736-155480736|T/-|frameshift_variant;ASH1L|p.S2309Ifs*11|1|0.64|ENSG00000116539|chr1:155357635-155357636|-/T|frameshift_variant;ENSG00000116539|ENST00000392403|ASH1L;nc|ENSG00000116539|Q9NR48|ASH1L	104.0567914643314	0.03506238181059741	5				NaN	NaN	0	NaN	5403	3683	9087
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9089	27.685	NaN	2846.5	30	0	362.96	0.106	+			2408	APAPIHNQF	9	57	497.7587227157301	993.5028924982602	2	497.75970458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_APAPIHNQF_	ENSG00000051108|ENST00000439977|HERPUD1;ENST00000570273.5_1_16:56966069-56976120:+|nuORF;HERPUD1|p.S286Pfs*2|1|0.44|ENSG00000051108|chr16:56940194-56940194|C/-|frameshift_variant;nc|ENSG00000051108|Q15011-2|HERPUD1;nc|ENSG00000051108|Q15011-4|HERPUD1	65.80317337860623	0.1652391959156183	5				NaN	NaN	0	NaN	5404	3683	9087
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9090	27.687	NaN	2456.9	30	0	295.43	0.106	+			2133	ALKASLTLGI	10	65	493.81586812328965	985.6171833133793	2	493.8163146972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ALKASLTLGI_	ENSG00000158748|ENST00000289753|HTR6;HTR6|p.K262R|1|0.07|ENSG00000158748|chr1:19678637-19678637|A/G|missense_variant	35.17822180527639	0.5925517082438457	5				NaN	NaN	0	NaN	5405	3683	9087
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9091	27.689	NaN	2882.7	30	0	422.94	0.106	+			6194	AVQQPFINK	9	67	522.7952024653539	1043.5758519975077	2	522.79638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVQQPFINK_	ENSG00000186260|ENST00000571589|MRTFB;nc|ENSG00000186260|Q9ULH7-4|MRTFB;nc|ENSG00000186260|Q9ULH7|MRTFB	99.37495909608758	0.03983967222258828	5				NaN	NaN	0	NaN	5406	3683	9087
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9092	27.691	NaN	2021.8	30	0	346.79	0.106	+			25438	LPPGDSNQL	9	55	470.74087793068355	939.4672029281671	2	470.7405090332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LPPGDSNQL_	ENSG00000168036|ENST00000349496|CTNNB1	54.776311868738084	0.25715957988447635	5				NaN	NaN	0	NaN	5407	3683	9087
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9093	27.693	NaN	6663	30	0	4338.3	0.035	+			23739	LAYNLLKR	8	36	330.8745575557846	989.6018432675537	3	330.8748779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LAYNLLKR_	ENSG00000056050|ENST00000393381|HPF1	28.2542754592877	0.7411748056684583	5				NaN	NaN	0	NaN	5408	3683	9087
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9094	27.693	NaN	1757.4	30	0	165.66	0.139			+	13597	GLVNGLASLE	10	59	486.77166748046875	NaN	0	486.77166748046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GLVNGLASLE_	REV__sp|P16788|UL97_HCMVASerine/threonineproteinkinaseUL97OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL97PE=1SV=1;REV__sp|Q6SW46|UL97_HCMVMSerine/threonineproteinkinaseUL97OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL97PE=3SV=1	32.81241826257853	0.3924360933802784	5				NaN	NaN	0	NaN	5409	3683	9087
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9107	27.723	NaN	3824	30	0	1628.8	0.214	+			10555	EYATKISRF	9	57	557.7980907180968	1113.5816285029935	2	557.7987060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EYATKISRF_	ENSG00000057757|ENST00000246151|PITHD1;nc|ENSG00000057757|Q9GZP4-2|PITHD1	42.86426827375447	0.38666266728046506	5				NaN	NaN	0	NaN	5419	3686	9106
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9108	27.727	NaN	4279	30	0	555.19	0.106	+			19906	KEFDGKSLV	9	72	511.77938579164805	1021.5442186500961	2	511.7796325683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEFDGKSLV_	ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;ENST00000517330.1_1_5:77337712-77337985:-|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P;nc|ENSG00000205940|Q58FF8|HSP90AB2P	90.60085204095205	0.06317133949006545	5				NaN	NaN	0	NaN	5420	3686	9106
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9109	27.729	NaN	3728.8	30	0	576.96	0.106			+	13876	GRAATMTD	8	50	440.6955433823918	879.3765338315836	2	440.6951599121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))GRAATM(Oxidation (M))TD_	REV__ENST00000380752.9_1_13:30087970-30088375:-|nuORF	60.97194046774394	0.49215940876911696	5				NaN	NaN	0	NaN	5421	3686	9106
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9110	27.73	NaN	1737.1	30	0	149.71	0.106	+			2429	APFEQAGQKY	10	70	569.7799149466833	1137.5452769601666	2	569.7799682617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_APFEQAGQKY_	ENSG00000177106|ENST00000318562|EPS8L2;ENST00000526909.5_1_11:710402-726978:+|nuORF;ENST00000527832.5_1_11:724661-726978:+|nuORF;ENST00000531393.5_1_11:721935-726978:+|nuORF;EPS8L2|p.V669Gfs*33|1|0.13|ENSG00000177106|chr11:726690-726690|T/-|frameshift_variant;nc|ENSG00000177106|Q9H6S3-2|EPS8L2;nc|ENSG00000177106|Q9H6S3-3|EPS8L2	63.53385203322761	0.33370026130094593	5				NaN	NaN	0	NaN	5422	3686	9106
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9111	27.732	NaN	2603.2	30	0	636.54	0.106	+			29061	NTIDPSHPM	9	63	506.23137923821884	1010.4482055432377	2	506.23126220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NTIDPSHPM_	ENSG00000090861|ENST00000261772|AARS1;nc|ENSG00000090861|P49588-2|AARS1	74.25504064058377	0.12238981753128622	5				NaN	NaN	0	NaN	5423	3686	9106
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9112	27.734	NaN	3372.6	30	0	601.75	0.035				-1	 	0	62	515.751266672248	1029.487980411296	2	515.7516479492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5424	3686	9106
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9113	27.735	NaN	2256.3	30	0	689.99	0.139	+			18357	IQNGGLFIA	9	52	466.7637670054977	931.5129810777954	2	466.76336669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IQNGGLFIA_	ENSG00000123453|ENST00000439388|SARDH	52.29916861842294	0.2778091507991977	5				NaN	NaN	0	NaN	5425	3686	9106
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9127	27.767	NaN	8031.7	30	0	2305.6	0.214	+			26165	LSQWASSVSPL	11	53	392.20830466261486	1173.6030845880446	3	392.2081298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSQWASSVSPL_	ENST00000514442.5_1_5:149772876-149773050:+|nuORF	30.317721548370564	0.6717830234747728	5				NaN	NaN	0	NaN	5436	3689	9126
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9128	27.77	NaN	22770	30	0	17115	0.106				-1	 	0	46	343.19893605545855	684.3833191777171	2	343.1988830566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5437	3689	9126
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9129	27.772	NaN	3684.4	30	0	443.81	0.106	+			7568	DIHGTYKDLL	10	66	587.8085578283604	1173.6025627235208	2	587.8087158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DIHGTYKDLL_	CON__Q95121	62.107414245175825	0.3466735403679669	5				NaN	NaN	0	NaN	5438	3689	9126
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9130	27.774	NaN	4403.4	30	0	1192.2	0.106			+	43603	TILNNDLN	8	58	458.73990123736655	915.4652495415331	2	458.7403259277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TILNNDLN_	REV__tr|U7T3E0|U7T3E0_FUSNUUbiDfamilydecarboxylaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00236PE=4SV=1	35.61828744233558	0.6843154725607303	5				NaN	NaN	0	NaN	5439	3689	9126
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9131	27.776	NaN	1314	30	0	109.88	0.106	+			50807	YEQVAKAL	8	54	461.2553683859128	NaN	0	461.25579833984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YEQVAKAL_	ENSG00000213719|ENST00000375784|CLIC1	54.776311868738084	1.7418937515398478	5				NaN	NaN	0	NaN	5440	3689	9126
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9132	27.778	NaN	2036.6	30	0	225.31	0.034	+			42323	TAGAVTQCY	9	55	485.71831294051754	969.4220729478351	2	485.7184753417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_TAGAVTQC(Carbamidomethyl (C))Y_	ENSG00000105640|ENST00000222247|RPL18A	49.536043120802724	0.308405419312776	5				NaN	NaN	0	NaN	5441	3689	9126
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9133	27.778	NaN	3361.8	30	0	272.77	0.14			+	23391	LAAFASGNWL	10	68	525.2721731053795	1048.5297932775588	2	525.2723999023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LAAFASGNWL_	REV__BRWD3|p.A1140Lfs*42|2|0.13|ENSG00000165288|chrX:80691886-80691886|C/-|frameshift_variant;REV__BRWD3|p.F1372Qfs*6|1|0.03|ENSG00000165288|chrX:80684129-80684130|-/AATTG|frameshift_variant;REV__BRWD3|p.F540Lfs*91|1|0.67|ENSG00000165288|chrX:80723778-80723778|A/-|frameshift_variant;REV__BRWD3|p.I453Rfs*18|1|0.03|ENSG00000165288|chrX:80728782-80728783|-/TACTATACTAGTCCTT|frameshift_variant;REV__ENSG00000165288|ENST00000373275|BRWD3;REV__ENST00000478415.1_1_X:79999455-80064970:-|nuORF;REV__nc|ENSG00000165288|Q6RI45-5|BRWD3	72.87924865735499	0.25379688738724415	5				NaN	NaN	0	NaN	5442	3689	9126
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9147	27.81	NaN	4986.7	30	0	657.81	0.214	+			43156	TESTARVEL	9	64	503.2639962393886	1004.5134395455772	2	503.2642517089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TESTARVEL_	ENSG00000196235|ENST00000432763|SUPT5H;ENST00000599335.5_1_19:39959399-39965382:+|nuORF;nc|ENSG00000196235|O00267-2|SUPT5H;SUPT5H|p.P800Hfs*154|1|0.21|ENSG00000196235|chr19:39473425-39473425|C/-|frameshift_variant	76.16968421966216	0.11411088698345859	5				NaN	NaN	0	NaN	5453	3692	9146
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9148	27.813	NaN	7004.7	30	0	1628.1	0.106			+	24553	LGLSANTIQ	9	72	458.7582233025019	915.5018936718038	2	458.75811767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LGLSANTIQ_	REV__ENSG00000100979|ENST00000372431|PLTP;REV__nc|ENSG00000100979|P55058-2|PLTP;REV__nc|ENSG00000100979|P55058-4|PLTP	51.19269402634007	0.2889735674168909	5				NaN	NaN	0	NaN	5454	3692	9146
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9149	27.815	NaN	4329.8	30	0	544.54	0.106	+			38089	SPTNTVHMY	9	69	525.2393041155975	1048.464055297995	2	525.2401733398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SPTNTVHMY_	ENSG00000138592|ENST00000307179|USP8;nc|ENSG00000138592|P40818-2|USP8;USP8|p.K997Rfs*2|1|0.11|ENSG00000138592|chr15:50497178-50497178|A/-|frameshift_variant	93.19546047674547	0.05585629608842056	5				NaN	NaN	0	NaN	5455	3692	9146
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9150	27.817	NaN	2821.2	30	0	245.53	0.106	+			35253	SALHIAIEK	9	60	491.2914156702015	NaN	0	491.29022216796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SALHIAIEK_	ENSG00000187688|ENST00000338560|TRPV2;TRPV2|p.I444Sfs*23|3|0.39|ENSG00000187688|chr17:16427521-16427521|G/-|frameshift_variant	49.536043120802724	0.20989033510253738	5				NaN	NaN	0	NaN	5456	3692	9146
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9151	27.819	NaN	1969.1	30	0	222	0.106	+			34495	RVFSWSQAK	9	68	554.7982788600851	NaN	0	554.7982177734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RVFSWSQAK_	ENST00000286692.8_1_1:111682258-111682414:-|nuORF	74.1650062923329	0.09137789763820878	5				NaN	NaN	0	NaN	5457	3692	9146
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9152	27.821	NaN	2306	30	0	188.27	0.036	+			4762	ATNAACASLLK	11	67	560.2945421449411	1118.5745313566822	2	560.2951049804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_ATNAAC(Carbamidomethyl (C))ASLLK_	ENSG00000134996|ENST00000346234|OSTF1;OSTF1|p.K191Rfs*11|1|0.32|ENSG00000134996|chr9:75140914-75140914|A/-|frameshift_variant	80.91624569148213	0.14473443340275	5				NaN	NaN	0	NaN	5458	3692	9146
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9153	27.821	NaN	5043.4	30	0	2604.9	0.144			+	43824	TLRKVLFAK	9	46	359.2376856579986	1074.6912275741959	3	359.57220458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TLRKVLFAK_	REV__ENSG00000011258|ENST00000586178|MBTD1;REV__ENST00000591270.1_1_17:49270805-49337516:-|nuORF;REV__MBTD1|p.W255C|1|0.38|ENSG00000011258|chr17:51203203-51203203|C/A|missense_variant;REV__nc|ENSG00000011258|Q05BQ5-3|MBTD1	32.81241826257853	0.4965981579233955	5				NaN	NaN	0	NaN	5459	3692	9146
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9164	27.848	NaN	9895.8	30	0	2069.3	0.214	+			41800	SVSQPIMVQR	10	78	572.8105124172554	1143.6064719013107	2	572.8108520507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSQPIMVQR_	ENSG00000134644|ENST00000426105|PUM1;nc|ENSG00000134644|Q14671-2|PUM1;nc|ENSG00000134644|Q14671|PUM1	155.5333702123263	0.007513046059728936	5				NaN	NaN	0	NaN	5467	3695	9163
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9165	27.852	NaN	3018.7	30	0	449.81	0.106	+			39529	STFSAPLNK	9	56	482.7575462239549	963.5005395147098	2	482.7580871582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STFSAPLNK_	ENSG00000163026|ENST00000295148|WDCP;nc|ENSG00000163026|Q9H6R7-2|WDCP	71.87747018426188	0.13267044672804276	5				NaN	NaN	0	NaN	5468	3695	9163
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9166	27.854	NaN	2020.3	30	0	433.59	0.106			+	30609	QAREDTPQQ	9	62	536.7566117257383	1071.4986705182764	2	536.7572021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QAREDTPQQ_	REV__ENST00000562306.5_1_15:62539611-62540700:-|nuORF	27.882242232435846	0.5426732730940306	5				NaN	NaN	0	NaN	5469	3695	9163
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9167	27.856	NaN	1703	30	0	147.87	0.106			+	37336	SLELGPLPR	9	61	491.2914156702015	NaN	0	491.2901306152344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLELGPLPR_	REV__ENSG00000174428|ENST00000472837|GTF2IRD2B;REV__ENSG00000196275|ENST00000451013|GTF2IRD2;REV__GTF2IRD2|p.F606Sfs*8|1|0.44|ENSG00000196275|chr7:74797697-74797697|G/-|frameshift_variant;REV__nc|ENSG00000196275|Q86UP8-3|GTF2IRD2	44.116797842482775	0.2472372736944149	5				NaN	NaN	0	NaN	5470	3695	9163
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9168	27.858	NaN	1599.2	30	0	314.67	0.106			+	10921	FDLIPAVAPAR	11	37	390.5592050680124	NaN	0	390.56005859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FDLIPAVAPAR_	REV__ENSG00000105464|ENST00000263269|GRIN2D;REV__GRIN2D|p.L300Cfs*27|1|0.45|ENSG00000105464|chr19:48405161-48405161|C/-|frameshift_variant;REV__GRIN2D|p.R478Afs*15|1|0.29|ENSG00000105464|chr19:48414878-48414878|C/-|frameshift_variant	24.231819034082204	0.456735970842152	5				NaN	NaN	0	NaN	5471	3695	9163
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9169	27.859	NaN	1463.8	30	0	245.55	0.033	+			37654	SLQRSPAL	8	45	436.2516623627869	NaN	0	436.2501525878906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLQRSPAL_	SMTN|p.S239Afs*118|6|0.25|ENSG00000183963|chr22:31089936-31089936|C/-|frameshift_variant	49.44154591367651	1.7418937515398478	5				NaN	NaN	0	NaN	5472	3695	9163
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9181	27.885	NaN	19694	30	0	5055.1	0.215	+			39468	STFDTQITK	9	73	520.7663465460338	1039.5181401588675	2	520.766845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STFDTQITK_	ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC;PRKDC|p.D2437Wfs*3|1|0.11|ENSG00000253729|chr8:47840161-47840162|-/CA|frameshift_variant;PRKDC|p.K3681Nfs*6|1|0.32|ENSG00000253729|chr8:47785174-47785177|TTCT/-|frameshift_variant;PRKDC|p.M3670*|1|0.5|ENSG00000253729|chr8:47785212-47785212|T/-|frameshift_variant;PRKDC|p.M3846Cfs*12|1|0.13|ENSG00000253729|chr8:47779047-47779047|T/-|frameshift_variant;PRKDC|p.M4020Cfs*2|1|0.31|ENSG00000253729|chr8:47776968-47776968|T/-|frameshift_variant;PRKDC|p.N3605Kfs*3|1|0.22|ENSG00000253729|chr8:47788993-47788994|-/T|frameshift_variant;PRKDC|p.N4037Ifs*15|1|0.17|ENSG00000253729|chr8:47776916-47776916|T/-|frameshift_variant;PRKDC|p.R2704Gfs*13|2|0.34|ENSG00000253729|chr8:47834238-47834238|T/-|frameshift_variant;PRKDC|p.S3402Ifs*16|1|0.04|ENSG00000253729|chr8:47799302-47799303|-/AAACCGTGAGTTAGAGGAGGTAA|frameshift_variant;PRKDC|p.S4099Qfs*6|1|0.25|ENSG00000253729|chr8:47774265-47774265|A/-|frameshift_variant;PRKDC|p.T3268Pfs*7|1|0.5|ENSG00000253729|chr8:47803426-47803426|T/-|frameshift_variant;PRKDC|p.W3401Cfs*4|1|0.01|ENSG00000253729|chr8:47799304-47799305|-/AATGAATA|frameshift_variant	190.62248201133156	0.00022967542297918066	5				NaN	NaN	0	NaN	5481	3698	9180
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9182	27.889	NaN	6622.1	30	0	2522.7	0.106	+			33028	REIQTAVRL	9	71	543.3246037787603	1084.6346546243205	2	543.3252563476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_REIQTAVRL_	ENSG00000124635|ENST00000339812|H2BC11;ENSG00000146047|ENST00000274764|H2BC1;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;nc|ENSG00000203814|Q5QNW6-2|H2BC18	61.76455937419982	0.19890525308472518	5				NaN	NaN	0	NaN	5482	3698	9180
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9183	27.891	NaN	2689.1	30	0	434.86	0.106	+			15366	GTVVGLVNK	9	60	443.7713628585891	NaN	0	443.7711181640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTVVGLVNK_	ASH1L|p.H1793Ifs*7|1|0.13|ENSG00000116539|chr1:155438778-155438778|G/-|frameshift_variant;ASH1L|p.I970Lfs*9|1|0.2|ENSG00000116539|chr1:155479962-155479962|T/-|frameshift_variant;ASH1L|p.K1222Rfs*11|4|0.27|ENSG00000116539|chr1:155479205-155479205|T/-|frameshift_variant;ASH1L|p.K1533Sfs*17|1|0.25|ENSG00000116539|chr1:155478272-155478272|T/-|frameshift_variant;ASH1L|p.K2377Nfs*5|1|0.28|ENSG00000116539|chr1:155354570-155354570|T/-|frameshift_variant;ASH1L|p.N1822Tfs*2|1|0.33|ENSG00000116539|chr1:155438690-155438690|T/-|frameshift_variant;ASH1L|p.R712Efs*23|3|0.35|ENSG00000116539|chr1:155480736-155480736|T/-|frameshift_variant;ASH1L|p.S2309Ifs*11|1|0.64|ENSG00000116539|chr1:155357635-155357636|-/T|frameshift_variant;ENSG00000116539|ENST00000392403|ASH1L;nc|ENSG00000116539|Q9NR48|ASH1L	77.31757898189308	0.08057531075035683	5				NaN	NaN	0	NaN	5483	3698	9180
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9184	27.892	NaN	2254.6	30	0	283.95	0.106	+			20909	KITFCMGI	8	56	485.24716560883434	968.4797782844687	2	485.24761962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_KITFC(Carbamidomethyl (C))MGI_	ENST00000480546.1_1_10:95718567-95721153:-|nuORF;nc|ENSG00000180764|A2A3N6|PIPSL	54.76467175910256	0.5536104764165384	5				NaN	NaN	0	NaN	5484	3698	9180
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9185	27.894	NaN	1935.6	30	0	240.04	0.106	+			15742	GVSEVNGMMK	10	56	526.2494798757742	1050.4844068183484	2	526.2495727539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GVSEVNGMMK_	ATM|p.K2811Sfs*46|1|0.34|ENSG00000149311|chr11:108345750-108345750|A/-|frameshift_variant;ENSG00000149311|ENST00000675843|ATM;ENST00000524792.5_1_11:108158320-108236232:+|nuORF	58.2462437865262	0.38179041844353556	5				NaN	NaN	0	NaN	5485	3698	9180
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9186	27.896	NaN	1555.2	30	0	258.23	0.035			+	10871	FAVISVNKF	9	53	512.7953491210938	NaN	0	512.7953491210938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FAVISVNKF_	REV__ENSG00000113810|ENST00000357388|SMC4;REV__ENST00000462668.5_1_3:160131924-160151594:+|nuORF;REV__nc|ENSG00000113810|Q9NTJ3-2|SMC4	26.69291269510374	0.34280015626154364	5				NaN	NaN	0	NaN	5486	3698	9180
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9187	27.897	NaN	18886	30	0	5716	0.145	+			4447	ATILAGDVKVK	11	69	372.2325013602558	1113.6756746809674	3	372.2325439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATILAGDVKVK_	ENSG00000119669|ENST00000238647|IRF2BPL;ENSG00000168264|ENST00000366609|IRF2BP2;nc|ENSG00000168264|Q7Z5L9-2|IRF2BP2;nc|ENSG00000168264|Q7Z5L9-3|IRF2BP2	93.44185321454538	0.08468467990978058	5				NaN	NaN	0	NaN	5487	3698	9180
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9204	27.933	NaN	4813.7	30	0	924.54	0.214	+			16498	HETSNINDF	9	64	538.735625998389	1075.4566990635778	2	538.7362670898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HETSNINDF_	ENSG00000135821|ENST00000331872|GLUL;ENST00000603996.1_1_5:151230113-151230284:+|nuORF	112.10723106719422	0.02684780151337622	5				NaN	NaN	0	NaN	5501	3701	9203
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9205	27.937	NaN	2287.1	30	0	374.81	0.106				-1	VSHWCCLP	8	57	501.21953882498707	1000.4245247167742	2	501.2194519042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_VSHWC(Carbamidomethyl (C))CLP_	ENST00000418833.2_1_1:1335453-1336111:+|nuORF;ENST00000448629.5_1_1:1334931-1336111:+|nuORF;ENST00000572242.1_1_1:1335949-1336111:+|nuORF	37.028477286268924	0.6747514403204248	5				NaN	NaN	0	NaN	5502	3701	9203
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9206	27.939	NaN	2163.4	30	0	320.54	0.106	+			24952	LLAKAVQSI	9	63	471.80216974572096	941.5897865582419	2	471.8020324707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LLAKAVQSI_	ENSG00000111344|ENST00000548055|RASAL1;ENST00000418411.6_1_12:113540888-113573291:-|nuORF;nc|ENSG00000111344|O95294-2|RASAL1;nc|ENSG00000111344|O95294-3|RASAL1;nc|ENSG00000111344|O95294|RASAL1	60.97194046774394	0.20551255781574032	5				NaN	NaN	0	NaN	5503	3701	9203
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9207	27.941	NaN	1553	30	0	296.62	0.106			+	23945	LDQVGVIR	8	46	450.26855615873365	898.5225593842673	2	450.26885986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LDQVGVIR_	REV__ENSG00000070061|ENST00000374647|ELP1	34.172542307311794	0.6954784234644539	5				NaN	NaN	0	NaN	5504	3701	9203
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9208	27.943	NaN	2989.2	30	0	2075.7	0.106				-1	FDMLTVAALID	11	34	408.87788446970745	1223.6118240093224	3	408.8777160644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_FDM(Oxidation (M))LTVAALID_	ENSG00000119414|ENST00000373547|PPP6C;nc|ENSG00000119414|O00743-2|PPP6C;nc|ENSG00000119414|O00743-3|PPP6C	18.531049691330335	0.7837198200183355	5				NaN	NaN	0	NaN	5505	3701	9203
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9209	27.944	NaN	1244.4	30	0	125.59	0.036	+			18093	IKPKPVTFQ	9	55	529.3222707967901	1056.6299886603801	2	529.8244018554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IKPKPVTFQ_	ENSG00000158636|ENST00000695367|EMSY;ENST00000531641.1_1_11:76237526-76255878:+|nuORF;nc|ENSG00000158636|Q7Z589-2|EMSY;nc|ENSG00000158636|Q7Z589-4|EMSY;nc|ENSG00000158636|Q7Z589-5|EMSY;nc|ENSG00000158636|Q7Z589-6|EMSY;nc|ENSG00000158636|Q7Z589|EMSY	33.921630207806714	0.48623198279849766	5				NaN	NaN	0	NaN	5506	3701	9203
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9210	27.945	NaN	1340.1	30	0	149.81	0.139			+	46127	VDKSIPPPK	9	52	490.7922524146241	NaN	0	490.7928161621094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VDKSIPPPK_	REV__ENST00000575787.1_1_17:6802758-6803315:+|nuORF	37.81151784470057	0.28666463014928195	5				NaN	NaN	0	NaN	5507	3701	9203
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9223	27.974	NaN	14662	30	0	3797.9	0.214	+			22656	KTYGEIFEK	9	78	557.7924275112213	1113.5703020892424	2	557.7929077148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTYGEIFEK_	ENSG00000151366|ENST00000281031|NDUFC2;nc|ENSG00000151366|O95298-2|NDUFC2	109.82975700811294	0.02917171107062681	5				NaN	NaN	0	NaN	5517	3704	9222
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9224	27.978	NaN	1999.1	30	0	247.76	0.106			+	37511	SLLGRDAL	8	54	422.7476079585669	843.4806629839338	2	422.7476806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLLGRDAL_	REV__ENST00000531870.5_1_11:33183268-33211605:+|nuORF	54.776311868738084	0.5534952410049249	5				NaN	NaN	0	NaN	5518	3704	9222
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9225	27.98	NaN	2375	30	0	410.55	0.106	+			38581	SSFSSGISVF	10	63	509.2477167861262	1016.4808806390524	2	509.24798583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSFSSGISVF_	ENSG00000103043|ENST00000261776|VAC14	34.172542307311794	0.6007644933930345	5				NaN	NaN	0	NaN	5519	3704	9222
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9226	27.982	NaN	3621.2	30	0	583.7	0.106	+			3233	ASLATTLTK	9	62	453.26848231200296	904.5224116908059	2	453.268310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASLATTLTK_	ENSG00000129083|ENST00000439561|COPB1;ENST00000526191.1_1_11:14496007-14497407:-|nuORF	80.45461616416974	0.09558281504443908	5				NaN	NaN	0	NaN	5520	3704	9222
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9227	27.983	NaN	1313.8	30	0	161.13	0.106	+			33799	RQIPYTMMK	9	59	584.3043902396915	1166.594227546183	2	584.304443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RQIPYTMMK_	ENSG00000075415|ENST00000552981|SLC25A3;ENST00000546766.5_1_12:98989476-98995303:+|nuORF;ENST00000551123.5_1_12:98989412-98995303:+|nuORF;nc|ENSG00000075415|Q00325|SLC25A3	36.446750945000026	0.4619375763483977	5				NaN	NaN	0	NaN	5521	3704	9222
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9228	27.985	NaN	1507.4	30	0	143.21	0.037			+	9894	EQLRRLLVA	9	49	366.56396718989055	NaN	0	366.228759765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EQLRRLLVA_	REV__ENST00000340291.6_1_9:35812160-35812229:-|nuORF	24.519189625965996	0.35377483217337163	5				NaN	NaN	0	NaN	5522	3704	9222
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9229	27.986	NaN	883.9	30	0	101.54	0.139			+	24662	LGVFLAPLV	9	43	464.7950134277344	NaN	0	464.7950134277344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LGVFLAPLV_	REV__ABCA7|p.G1573Afs*82|1|0.27|ENSG00000064687|chr19:1057033-1057033|G/-|frameshift_variant;REV__ENSG00000064687|ENST00000263094|ABCA7;REV__nc|ENSG00000064687|Q8IZY2-2|ABCA7	49.21078951299608	0.21213183292994464	5				NaN	NaN	0	NaN	5523	3704	9222
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9241	28.013	NaN	5135.9	30	0	874.37	0.214	+			1702	AGVFVDATK	9	65	454.2474177117885	906.480282490377	2	454.24749755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AGVFVDATK_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	65.46538089061403	0.16805504838372562	5				NaN	NaN	0	NaN	5532	3707	9240
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9242	28.017	NaN	6600.8	30	0	592.65	0.106	+			44121	TPYKGGNLY	9	66	506.7581057207908	1011.5016585083816	2	506.7574462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TPYKGGNLY_	ENSG00000144674|ENST00000361924|GOLGA4;nc|ENSG00000144674|Q13439-3|GOLGA4;nc|ENSG00000144674|Q13439-4|GOLGA4;nc|ENSG00000144674|Q13439-5|GOLGA4	84.9155231211612	0.07920012719736333	5				NaN	NaN	0	NaN	5533	3707	9240
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9243	28.019	NaN	3916.5	30	0	428.27	0.106			+	5	AAAAFALAAAP	11	63	472.76413596951784	943.5137190058357	2	472.7630920410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AAAAFALAAAP_	REV__ENST00000337304.2_1_22:39916672-39916864:+|nuORF	60.29395666154354	0.3208311535967446	5				NaN	NaN	0	NaN	5534	3707	9240
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9244	28.02	NaN	1908.3	30	0	166.98	0.106	+			9827	EPILEGHLG	9	54	482.7575462239549	963.5005395147098	2	483.2571105957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EPILEGHLG_	ENSG00000114374|ENST00000338981|USP9Y;ENST00000426564.6_1_Y:14821380-14953057:+|nuORF;nc|ENSG00000114374|O00507-2|USP9Y	31.954861631926434	0.5046124803899898	5				NaN	NaN	0	NaN	5535	3707	9240
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9245	28.022	NaN	5822	30	0	677.66	0.106	+			2688	AQNSVIIVDK	10	73	543.8114788151327	1085.6084046970652	2	543.8115844726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AQNSVIIVDK_	ENSG00000072274|ENST00000360110|TFRC	120.63048641472336	0.026439265609364573	5				NaN	NaN	0	NaN	5536	3707	9240
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9246	28.024	NaN	1696.3	30	0	403.83	0.035	+			19676	KDNKVYIK	8	51	504.2977498233934	1006.5809467135869	2	504.29833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KDNKVYIK_	ENSG00000134901|ENST00000376004|POGLUT2;ENST00000460338.5_1_13:103443606-103451020:-|nuORF	27.882242232435846	0.7440473649773525	5				NaN	NaN	0	NaN	5537	3707	9240
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9247	28.025	NaN	3681.4	30	0	551.33	0.138	+			3746	ATADLALGR	9	60	444.25083855526225	886.4871241773245	2	444.2641296386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATADLALGR_	ENSG00000172037|ENST00000305544|LAMB2;ENST00000469665.1_1_3:49160056-49160527:-|nuORF	95.81516180277367	0.04847050768394289	5				NaN	NaN	0	NaN	5538	3707	9240
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9259	28.052	NaN	13161	30	0	1867.5	0.215	+			3747	ATADLALGR	9	74	444.25083855526225	886.4871241773245	2	444.2510986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATADLALGR_	ENSG00000172037|ENST00000305544|LAMB2;ENST00000469665.1_1_3:49160056-49160527:-|nuORF	145.15565482312357	0.00806134135205793	5				NaN	NaN	0	NaN	5547	3710	9258
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9260	28.055	NaN	4431.1	30	0	535.48	0.106	+			45492	TYDNVHQQF	9	75	576.259349655074	1150.5041463769478	2	576.2608032226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TYDNVHQQF_	ENSG00000138639|ENST00000395184|ARHGAP24;nc|ENSG00000138639|Q8N264-2|ARHGAP24;nc|ENSG00000138639|Q8N264-3|ARHGAP24	129.42129120953632	0.01549634589885217	5				NaN	NaN	0	NaN	5548	3710	9258
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9261	28.057	NaN	2246.9	30	0	325.49	0.106			+	11949	FVITVINNG	9	55	488.7757286875627	975.5369044419255	2	488.77734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FVITVINNG_	REV__GARNL3|p.D301N|1|0.35|ENSG00000136895|chr9:127336155-127336155|G/A|missense_variant	37.15910966729921	0.4535818937225704	5				NaN	NaN	0	NaN	5549	3710	9258
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9262	28.059	NaN	1953.9	30	0	208.57	0.106				-1	STGVQAGIPMP	11	60	537.270263671875	NaN	0	537.270263671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_STGVQAGIPM(Oxidation (M))P_	ENSG00000142657|ENST00000270776|PGD;ENST00000496718.1_1_1:10478943-10479617:+|nuORF;nc|ENSG00000142657|P52209-2|PGD	41.42661286455405	0.376895999158515	5				NaN	NaN	0	NaN	5550	3710	9258
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9263	28.061	NaN	3096.4	30	0	888.28	0.106			+	23680	LASMLRTNASD	11	38	393.53309988504645	1177.5774702553394	3	393.867919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LASMLRTNASD_	REV__ENSG00000075391|ENST00000367649|RASAL2;REV__ENST00000433130.2_1_1:178439834-178442371:+|nuORF;REV__nc|ENSG00000075391|Q9UJF2|RASAL2	28.5767321226876	0.690044582712672	5				NaN	NaN	0	NaN	5551	3710	9258
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9264	28.063	NaN	2355.4	30	0	628.65	0.035			+	19703	KDSLIKIAV	9	54	493.81586812328965	985.6171833133793	2	493.8170166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KDSLIKIAV_	REV__ATG2B|p.V1175I|1|0.4|ENSG00000066739|chr14:96315422-96315422|C/T|missense_variant	72.87924865735499	0.12833875048249987	5				NaN	NaN	0	NaN	5552	3710	9258
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9278	28.092	NaN	10016	30	0	1140.3	0.214	+			16167	HEAEVLKQL	9	80	533.797995828817	1065.5814387244338	2	533.7984619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HEAEVLKQL_	ENSG00000117632|ENST00000455785|STMN1;ENST00000465604.1_1_1:26227509-26228203:-|nuORF;ENST00000485226.1_1_1:26227942-26230296:-|nuORF;nc|ENSG00000117632|P16949-2|STMN1	167.22876102047192	0.0032399547248545047	5				NaN	NaN	0	NaN	5563	3713	9277
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9279	28.096	NaN	3737.3	30	0	592.27	0.106	+			3617	ASVSTVLTSK	10	71	496.7845281388695	991.5545033445391	2	496.7845458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASVSTVLTSK_	ENSG00000188536|ENST00000251595|HBA2;ENSG00000206172|ENST00000320868|HBA1	101.45984612302182	0.07336148045341315	5				NaN	NaN	0	NaN	5564	3713	9277
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9280	28.098	NaN	1235.9	30	0	87.791	0.035			+	35722	SDLPVNYVE	9	54	518.2528452953214	1034.4911376574428	2	518.2529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SDLPVNYVE_	REV__ENSG00000101745|ENST00000262126|ANKRD12;REV__nc|ENSG00000101745|Q6UB98-2|ANKRD12	39.252832667884924	0.4290233611298554	5				NaN	NaN	0	NaN	5565	3713	9277
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9293	28.125	NaN	6015	30	0	1140.6	0.214	+			18764	ITNDGATILK	10	69	523.2977232887006	1044.580893644201	2	523.29833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ITNDGATILK_	CCT4|p.T490Lfs*30|1|0.4|ENSG00000115484|chr2:61872105-61872105|T/-|frameshift_variant;ENSG00000115484|ENST00000394440|CCT4;ENSG00000120438|ENST00000321394|TCP1;ENST00000538128.5_2_6:160206507-160210586:-|nuORF;ENST00000543532.5_1_6:160205081-160210626:-|nuORF;ENST00000544255.5_1_6:160205081-160210586:-|nuORF;TCP1|p.A232Gfs*7|1|0.05|ENSG00000120438|chr6:159784043-159784044|-/C|frameshift_variant	156.16072019525166	0.007401655565974521	5				NaN	NaN	0	NaN	5575	3716	9292
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9294	28.129	NaN	3846.8	30	0	810.51	0.106	+			41676	SVSAVNLPK	9	65	457.76953230604914	913.5245116788983	2	457.7685852050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVSAVNLPK_	ENSG00000116871|ENST00000474796|MAP7D1;MAP7D1|p.A565Rfs*10|1|0.29|ENSG00000116871|chr1:36178180-36178180|C/-|frameshift_variant;MAP7D1|p.C481Afs*94|2|0.29|ENSG00000116871|chr1:36177929-36177929|C/-|frameshift_variant;MAP7D1|p.R498Efs*77|2|0.32|ENSG00000116871|chr1:36177980-36177980|C/-|frameshift_variant;nc|ENSG00000116871|Q3KQU3-4|MAP7D1;nc|ENSG00000116871|Q3KQU3|MAP7D1	39.252832667884924	0.4290233611298554	5				NaN	NaN	0	NaN	5576	3716	9292
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9295	28.131	NaN	4163.1	30	0	1437	0.106			+	5840	AVIISENLQ	9	56	493.7794212401295	985.5442895470591	2	493.7792053222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVIISENLQ_	REV__ENSG00000138592|ENST00000307179|USP8;REV__ENST00000419830.2_1_15:50786258-50791282:+|nuORF;REV__nc|ENSG00000138592|P40818-2|USP8;REV__USP8|p.K997Rfs*2|1|0.11|ENSG00000138592|chr15:50497178-50497178|A/-|frameshift_variant	42.396135135203025	0.392153681582562	5				NaN	NaN	0	NaN	5577	3716	9292
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9296	28.133	NaN	1643.3	30	0	458.3	0.106			+	4520	ATKLDEVVQ	9	52	501.77659925682394	1001.5386455804479	2	501.7764587402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATKLDEVVQ_	REV__DAAM2|p.P525Lfs*11|1|0.48|ENSG00000146122|chr6:39879202-39879202|C/-|frameshift_variant;REV__ENSG00000146122|ENST00000274867|DAAM2;REV__nc|ENSG00000146122|Q86T65-4|DAAM2	42.86426827375447	0.38666266728046506	5				NaN	NaN	0	NaN	5578	3716	9292
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9297	28.134	NaN	2840.3	30	0	254.46	0.106			+	6929	CNKLFLPT	8	57	468.25564128061114	934.4967296280223	2	468.2551574707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_CNKLFLPT_	REV__ENSG00000198691|ENST00000370225|ABCA4	47.91560031466742	0.6071945918984287	5				NaN	NaN	0	NaN	5579	3716	9292
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9298	28.136	NaN	1985.9	30	0	127.2	0.106	+			26204	LSSARGRAP	9	63	478.7654190543738	955.5162851755476	2	478.76483154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LSSARGRAP_	ENST00000398061.5_1_21:45379519-45387977:+|nuORF	45.97224482568171	0.3502073465782774	5				NaN	NaN	0	NaN	5580	3716	9292
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9299	28.138	NaN	1800.1	30	0	533.73	0.037				-1	SDPESSLCALC	11	45	591.2434116526285	1180.472270372057	2	591.243408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_SDPESSLCALC(Carbamidomethyl (C))_	CON__Q2HJF0	20.94693142431847	0.7700749696703488	5				NaN	NaN	0	NaN	5581	3716	9292
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9314	28.17	NaN	23239	30	0	12862	0.214	+			15902	HAALETQTL	9	70	492.26138324735984	982.5082135615197	2	492.26129150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HAALETQTL_	ENSG00000176945|ENST00000447234|MUC20;ENST00000457750.1_1_3:195341833-195346985:+|nuORF;nc|ENSG00000176945|Q8N307-3|MUC20	95.81516180277367	0.04847050768394289	5				NaN	NaN	0	NaN	5593	3719	9313
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9315	28.173	NaN	17059	30	0	1428.5	0.106	+			34634	RVQEAVESMVK	11	88	638.3395946080482	1274.6646362828963	2	638.3399047851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RVQEAVESMVK_	ENSG00000035141|ENST00000430566|FAM136A;ENST00000460307.1_1_2:70528513-70529143:-|nuORF;ENST00000498665.1_1_2:70527944-70529143:-|nuORF;nc|ENSG00000035141|Q96C01|FAM136A	150.15188659993407	7.025925813289175E-05	5				NaN	NaN	0	NaN	5594	3719	9313
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9316	28.175	NaN	14280	30	0	1483.3	0.106	+			34635	RVQEAVESMVK	11	68	425.8957429268454	1274.6653993807363	3	425.8957214355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RVQEAVESMVK_	ENSG00000035141|ENST00000430566|FAM136A;ENST00000460307.1_1_2:70528513-70529143:-|nuORF;ENST00000498665.1_1_2:70527944-70529143:-|nuORF;nc|ENSG00000035141|Q96C01|FAM136A	62.166158670854095	0.3041191743798417	5				NaN	NaN	0	NaN	5595	3719	9313
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9317	28.177	NaN	2819.3	30	0	561.32	0.106	+			27568	MPFKKGAAF	9	57	498.77131535603934	995.5280777788787	2	498.77056884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MPFKKGAAF_	ENSG00000171747|ENST00000307751|LGALS4	101.21157088398209	0.03796561369277615	5				NaN	NaN	0	NaN	5596	3719	9313
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9318	28.179	NaN	3464.2	30	0	490.86	0.106	+			36054	SEISSATKL	9	63	468.25564128061114	934.4967296280223	2	468.2554016113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SEISSATKL_	ATRX|p.I1049*|1|0.07|ENSG00000085224|chrX:77682111-77682111|T/-|frameshift_variant;ATRX|p.I1049Nfs*4|1|0.15|ENSG00000085224|chrX:77682110-77682111|-/T|frameshift_variant;ATRX|p.K993Rfs*10|1|0.26|ENSG00000085224|chrX:77682278-77682278|T/-|frameshift_variant;ATRX|p.N1318Ifs*28|1|0.39|ENSG00000085224|chrX:77663549-77663549|T/-|frameshift_variant;ATRX|p.Q1385Sfs*6|1|0.26|ENSG00000085224|chrX:77656621-77656622|-/A|frameshift_variant;ATRX|p.R840Kfs*9|1|0.36|ENSG00000085224|chrX:77682737-77682738|-/T|frameshift_variant;ENSG00000085224|ENST00000373344|ATRX;nc|ENSG00000085224|P46100-2|ATRX;nc|ENSG00000085224|P46100-3|ATRX;nc|ENSG00000085224|P46100-4|ATRX;nc|ENSG00000085224|P46100-5|ATRX;nc|ENSG00000085224|P46100-6|ATRX	49.536043120802724	0.308405419312776	5				NaN	NaN	0	NaN	5597	3719	9313
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9319	28.181	NaN	3043.6	30	0	233.58	0.034			+	-1	IQVCMVII	8	65	488.2713813902883	NaN	0	488.2713317871094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_IQVC(Carbamidomethyl (C))MVII_	REV__ENSG00000101290|ENST00000460006|CDS2;REV__ENST00000467923.5_1_20:5107766-5163790:+|nuORF;REV__ENST00000468817.5_1_20:5109393-5167506:+|nuORF;REV__nc|ENSG00000101290|O95674-2|CDS2	54.76467175910256	1.7418937515398478	5				NaN	NaN	0	NaN	5598	3719	9313
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9320	28.181	NaN	3421.4	30	0	1335.6	0.14			+	-1	PMVYEITF	8	56	508.24601839555856	1014.4774838579172	2	508.24566650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_PM(Oxidation (M))VYEITF_	REV__ENSG00000075429|ENST00000533854|CACNG5	44.53106598305862	0.628196326904373	5				NaN	NaN	0	NaN	5599	3719	9313
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9338	28.221	NaN	12475	30	0	3120	0.214	+			35887	SEERFRPSL	9	72	560.7914714007514	NaN	0	560.7913208007812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEERFRPSL_	CTNNA1|p.K493Nfs*31|1|0.19|ENSG00000044115|chr5:138917827-138917827|A/-|frameshift_variant;CTNNA1|p.T832*|1|0.29|ENSG00000044115|chr5:138933859-138933862|CAGA/-|frameshift_variant;ENSG00000044115|ENST00000302763|CTNNA1;ENST00000522730.1_1_5:138160461-138163428:+|nuORF;nc|ENSG00000044115|P35221-2|CTNNA1	72.87924865735499	0.09578366712754152	5				NaN	NaN	0	NaN	5614	3722	9337
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9339	28.224	NaN	17880	30	0	10490	0.106	+			8498	EATFKEAEKEL	11	59	432.2224710960768	1293.6455838884303	3	432.2223815917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EATFKEAEKEL_	ENSG00000154997|ENST00000388975|SEPTIN14	36.446750945000026	0.6065623449959539	5				NaN	NaN	0	NaN	5615	3722	9337
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9340	28.226	NaN	7957.3	30	0	1406.9	0.106	+			10836	FASHVSPEV	9	72	486.7428208748628	971.4710888165256	2	486.7427062988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FASHVSPEV_	ARFGAP3|p.G224Afs*32|1|0.31|ENSG00000242247|chr22:42823659-42823659|T/-|frameshift_variant;ENSG00000242247|ENST00000263245|ARFGAP3;nc|ENSG00000242247|Q9NP61-2|ARFGAP3	108.08749611321984	0.03094949498378333	5				NaN	NaN	0	NaN	5616	3722	9337
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9341	28.228	NaN	2735.6	30	0	340.31	0.106			+	9744	ENEEALQFLA	10	63	582.2829481690939	1162.5513434049876	2	582.2837524414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ENEEALQFLA_	REV__nc|ENSG00000114439|Q8WY36-3|BBX	47.95952297671804	0.47580206326914537	5				NaN	NaN	0	NaN	5617	3722	9337
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9342	28.23	NaN	6286.5	30	0	894.65	0.106	+			11025	FEKKYVATL	9	65	549.8133999239942	1097.6122469147883	2	549.8138427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FEKKYVATL_	ENSG00000132341|ENST00000543796|RAN	104.42354056486148	0.0346881550498418	5				NaN	NaN	0	NaN	5618	3722	9337
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9343	28.232	NaN	4404.7	30	0	2714.7	0.033	+			10889	FCLQGKAN	8	51	440.72102399974614	879.4274950662923	2	440.7209777832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FCLQGKAN_	ENSG00000081985|ENST00000674203|IL12RB2;nc|ENSG00000081985|Q99665-2|IL12RB2;nc|ENSG00000081985|Q99665-3|IL12RB2	37.028477286268924	0.6747514403204248	5				NaN	NaN	0	NaN	5619	3722	9337
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9344	28.232	NaN	2217.2	30	0	269.28	0.14	+			9319	EIEIIPCSR	9	68	530.2789891827822	1058.5434254323643	2	530.2797241210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EIEIIPCSR_	ENSG00000136542|ENST00000259056|GALNT5	47.657333605630114	0.33044192980041115	5				NaN	NaN	0	NaN	5620	3722	9337
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9358	28.264	NaN	7298	30	0	1863.7	0.214				-1	TSLPSAICK	9	65	488.75952049141983	975.5044880496397	2	488.7599792480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_TSLPSAIC(Carbamidomethyl (C))K_	ENSG00000177731|ENST00000327031|FLII;ENST00000578101.5_1_17:18148454-18160363:-|nuORF;FLII|p.K628Rfs*27|1|0.37|ENSG00000177731|chr17:18249178-18249178|T/-|frameshift_variant;FLII|p.S470Afs*32|1|0.36|ENSG00000177731|chr17:18251454-18251454|G/-|frameshift_variant;nc|ENSG00000177731|Q13045-2|FLII;nc|ENSG00000177731|Q13045-3|FLII	71.87747018426188	0.13267044672804276	5				NaN	NaN	0	NaN	5631	3725	9357
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9359	28.267	NaN	4493.2	30	0	954.98	0.106	+			44058	TPSCHLLHK	9	74	518.2720739585358	1034.5295949838714	2	518.7752685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TPSCHLLHK_	ATR|p.N1135*|1|0.36|ENSG00000175054|chr3:142542712-142542713|-/A|frameshift_variant;ATR|p.S709Yfs*25|1|0.07|ENSG00000175054|chr3:142556093-142556094|AA/-|frameshift_variant;ATR|p.S927Qfs*4|1|0.34|ENSG00000175054|chr3:142553254-142553255|-/A|frameshift_variant;ENSG00000175054|ENST00000350721|ATR;nc|ENSG00000175054|Q13535-2|ATR;nc|ENSG00000175054|Q13535-3|ATR	33.51558372728122	0.4900267029546261	5				NaN	NaN	0	NaN	5632	3725	9357
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9360	28.269	NaN	8533.8	30	0	1182.9	0.106	+			38803	SSMTAVLQK	9	60	482.76051303655623	963.5064731399125	2	482.7597961425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSMTAVLQK_	ENST00000470658.1_1_21:44293721-44296875:-|nuORF	120.8684288430529	0.02067403653475984	5				NaN	NaN	0	NaN	5633	3725	9357
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9361	28.271	NaN	570.65	30	0	33.526	0.106				-1	CPICKQPVHRG	11	39	647.829328336377	1293.6441037395539	2	647.8295288085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_C(Carbamidomethyl (C))PICKQPVHRG_	ENSG00000108523|ENST00000262482|RNF167;ENST00000572382.5_1_17:4846799-4848308:+|nuORF;nc|ENSG00000108523|Q9H6Y7-2|RNF167	19.996771675451527	0.7768568223548057	5				NaN	NaN	0	NaN	5634	3725	9357
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9362	28.273	NaN	1140.5	30	0	119.76	0.106	+			39293	STASFSLSPF	10	55	522.2565158368533	1042.4984787405065	2	522.2567749023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STASFSLSPF_	ENSG00000183423|ENST00000594814|LRIT3;nc|ENSG00000183423|Q3SXY7-2|LRIT3	27.882242232435846	0.6521336255503853	5				NaN	NaN	0	NaN	5635	3725	9357
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9363	28.275	NaN	3224	30	0	241.09	0.036			+	11479	FNVFFNCL	8	64	530.7501594187519	NaN	0	530.749755859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_FNVFFNC(Carbamidomethyl (C))L_	REV__ENSG00000174721|ENST00000311575|FGFBP3	47.91560031466742	1.7418937515398478	5				NaN	NaN	0	NaN	5636	3725	9357
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9364	28.275	NaN	936.99	30	0	491.85	0.143			+	-1	LAPLWHLM	8	21	332.84940152898923	995.5263751871678	3	332.8493347167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_LAPLWHLM(Oxidation (M))_	REV__ADCY4|p.K644N|1|0.38|ENSG00000129467|chr14:24324176-24324176|C/A|missense_variant;REV__ENSG00000129467|ENST00000418030|ADCY4;REV__ENST00000554577.5_1_14:24791640-24799178:-|nuORF;REV__ENST00000557056.5_1_14:24792528-24800258:-|nuORF;REV__nc|ENSG00000129467|Q8NFM4-2|ADCY4	12.959181472943097	0.7887000251064199	5				NaN	NaN	0	NaN	5637	3725	9357
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9378	28.307	NaN	8233	30	0	1175.7	0.214	+			36061	SEITTKDL	8	66	453.7426497185748	905.4707465039496	2	453.74212646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEITTKDL_	ENSG00000187514|ENST00000409115|PTMA;ENST00000468027.5_1_2:232573416-232577283:+|nuORF;nc|ENSG00000187514|P06454|PTMA	107.00750918261382	0.24681273948614665	5				NaN	NaN	0	NaN	5648	3728	9377
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9379	28.31	NaN	2321	30	0	378	0.106	+			36436	SEVAMHSL	8	52	437.21069858771403	872.4068442422281	2	437.2102355957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEVAMHSL_	ENSG00000100290|ENST00000216115|BIK	45.9519527083369	0.6193794311207887	5				NaN	NaN	0	NaN	5649	3728	9377
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9380	28.312	NaN	2780.9	30	0	256.88	0.106	+			8422	EAQPIVTKY	9	61	524.7877019383535	1047.560850943507	2	524.7879638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EAQPIVTKY_	ENSG00000214753|ENST00000301785|HNRNPUL2	82.7504851949679	0.08565546331141553	5				NaN	NaN	0	NaN	5650	3728	9377
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9381	28.314	NaN	1368.1	30	0	137.83	0.106	+			27938	MVFRDFLP	8	56	512.7690164636443	NaN	0	512.7691650390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MVFRDFLP_	ENST00000272227.7_1_2:10933301-10937275:-|nuORF	37.15910966729921	1.7418937515398478	5				NaN	NaN	0	NaN	5651	3728	9377
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9382	28.316	NaN	1665.8	30	0	252.52	0.106			+	-1	QVSPSSKEQMC	11	49	427.523435366529	1279.548476699787	3	427.5231628417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_QVSPSSKEQMC(Carbamidomethyl (C))_	REV__GATA2|p.F428Sfs*49|1|0.22|ENSG00000179348|chr3:128481181-128481181|G/-|frameshift_variant	22.561587123415745	0.7531385481947795	5				NaN	NaN	0	NaN	5652	3728	9377
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9383	28.318	NaN	2037.5	30	0	320.99	0.036	+			26697	LVHVDGHLY	9	57	526.7797643870393	1051.5449758408786	2	526.7798461914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LVHVDGHLY_	ENSG00000118939|ENST00000377595|UCHL3;ENST00000563635.5_1_13:76123956-76287321:+|nuORF;ENST00000570285.1_1_13:76140977-76197422:+|nuORF	35.200714571348534	0.47427825964483533	5				NaN	NaN	0	NaN	5653	3728	9377
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9384	28.318	NaN	1510.2	30	0	672.94	0.139			+	-1	RPCLPPAL	8	45	462.26025020960645	922.5059474860129	2	462.2603759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_RPC(Carbamidomethyl (C))LPPAL_	REV__ENST00000487659.1_1_1:1341772-1341910:-|nuORF	29.841539824830324	0.7289191502596711	5				NaN	NaN	0	NaN	5654	3728	9377
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9397	28.347	NaN	36657	30	0	4308.3	0.214	+			3870	ATANQIILK	9	81	486.29773110249874	970.5809092717975	2	486.29840087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATANQIILK_	nc|ENSG00000139793|Q5VZF2-2|MBNL2	171.53180478179638	0.0025054460641941692	5				NaN	NaN	0	NaN	5664	3731	9396
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9398	28.351	NaN	5961.9	30	0	499.64	0.106	+			43040	TELAMRQSV	9	63	517.7693621925396	NaN	0	517.7697143554688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TELAMRQSV_	CON__P05784;ENSG00000111057|ENST00000388835|KRT18;ENST00000396959.2_1_3:12829511-12830132:-|nuORF;ENST00000424695.1_1_1:238654935-238655424:+|nuORF;ENST00000427733.1_1_13:90882929-90883235:+|nuORF;ENST00000549078.5_1_12:53344429-53346127:+|nuORF	123.20810148215591	0.0016355521601317592	5				NaN	NaN	0	NaN	5665	3731	9396
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9399	28.353	NaN	9540.3	30	0	968.88	0.106			+	33101	RELKEQMEL	9	80	588.3083286117097	1174.6021042902194	2	588.3092041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RELKEQMEL_	REV__ENSG00000099308|ENST00000687212|MAST3;REV__ENST00000608648.1_1_19:18220994-18239762:+|nuORF;REV__nc|ENSG00000099308|O60307|MAST3	104.42354056486148	0.0346881550498418	5				NaN	NaN	0	NaN	5666	3731	9396
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9400	28.355	NaN	4339.6	30	0	534.78	0.106			+	23863	LDEKHLIE	8	72	498.77131535603934	995.5280777788787	2	498.7762756347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LDEKHLIE_	REV__ENSG00000104892|ENST00000391946|KLC3;REV__nc|ENSG00000104892|Q6P597-2|KLC3;REV__nc|ENSG00000104892|Q6P597-3|KLC3	64.20726635412375	0.4601301477144759	5				NaN	NaN	0	NaN	5667	3731	9396
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9401	28.356	NaN	1858.1	30	0	394.74	0.106			+	47146	VLRALARRP	9	39	351.2328905696896	NaN	0	351.2330017089844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VLRALARRP_	REV__ENST00000447184.5_1_1:45984722-45987591:-|nuORF	14.137123925751023	0.3891339986947948	5				NaN	NaN	0	NaN	5668	3731	9396
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9402	28.358	NaN	2265.6	30	0	179.82	0.036	+			36820	SIENLQHEC	9	65	536.7410888671875	NaN	0	536.7410888671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SIENLQHEC_	ENSG00000104133|ENST00000261866|SPG11;nc|ENSG00000104133|Q96JI7-2|SPG11;nc|ENSG00000104133|Q96JI7-3|SPG11	37.81151784470057	0.28666463014928195	5				NaN	NaN	0	NaN	5669	3731	9396
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9414	28.384	NaN	1521	30	0	208.45	0.214	+			37298	SLCSVSIEK	9	54	511.7628857566233	NaN	0	511.7629089355469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SLC(Carbamidomethyl (C))SVSIEK_	ENSG00000065534|ENST00000360304|MYLK;ENST00000504946.5_1_3:123400948-123419770:-|nuORF;nc|ENSG00000065534|Q15746-11|MYLK;nc|ENSG00000065534|Q15746-2|MYLK;nc|ENSG00000065534|Q15746-3|MYLK;nc|ENSG00000065534|Q15746-4|MYLK;nc|ENSG00000065534|Q15746-5|MYLK;nc|ENSG00000065534|Q15746-6|MYLK;nc|ENSG00000065534|Q15746-7|MYLK	42.86426827375447	0.2558691296974908	5				NaN	NaN	0	NaN	5678	3734	9413
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9415	28.387	NaN	2192.2	30	0	158.06	0.106	+			17288	IADAAYKAM	9	61	477.2415932637207	952.4686335942414	2	477.2414855957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IADAAYKAM_	ENSG00000176658|ENST00000318217|MYO1D	93.1432384553994	0.056003526918089595	5				NaN	NaN	0	NaN	5679	3734	9413
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9416	28.389	NaN	4069.2	30	0	830.79	0.106	+			7301	DASGAKLDY	9	59	470.2247354747462	938.4349180162924	2	470.22418212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DASGAKLDY_	BZW1|p.N285Tfs*11|2|0.26|ENSG00000082153|chr2:200818782-200818782|A/-|frameshift_variant;BZW1|p.N286*|1|0.04|ENSG00000082153|chr2:200818790-200818791|-/T|frameshift_variant;BZW1|p.S325Rfs*19|1|0.04|ENSG00000082153|chr2:200819989-200819990|-/ACAATATAGAA|frameshift_variant;ENSG00000082153|ENST00000409600|BZW1;ENST00000464483.1_1_2:201677931-201680272:+|nuORF;nc|ENSG00000082153|Q7L1Q6-2|BZW1;nc|ENSG00000082153|Q7L1Q6-3|BZW1;nc|ENSG00000082153|Q7L1Q6-4|BZW1	101.25262130126117	0.03792372629710479	5				NaN	NaN	0	NaN	5680	3734	9413
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9417	28.391	NaN	1950.1	30	0	386.28	0.106			+	23399	LAAKMPWK	8	61	472.77421563189245	943.5338783305849	2	472.7741394042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LAAKMPWK_	REV__DNHD1|p.S3597Rfs*6|1|0.1|ENSG00000179532|chr11:6565718-6565719|-/AG|frameshift_variant;REV__DNHD1|p.T4259Pfs*33|2|0.33|ENSG00000179532|chr11:6568772-6568772|C/-|frameshift_variant;REV__ENSG00000179532|ENST00000254579|DNHD1	35.200714571348534	0.6875396545722289	5				NaN	NaN	0	NaN	5681	3734	9413
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9418	28.393	NaN	1747	30	0	287.67	0.106	+			8555	EAVQIQFGL	9	55	502.77644007232226	NaN	0	502.7763977050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EAVQIQFGL_	ENSG00000075618|ENST00000382361|FSCN1	49.536043120802724	0.20989033510253738	5				NaN	NaN	0	NaN	5682	3734	9413
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9419	28.395	NaN	1818.4	30	0	424	0.034	+			3554	ASTLSLVNK	9	50	466.7739472606592	NaN	0	466.77447509765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASTLSLVNK_	ENSG00000159140|ENST00000356577|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-4|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-6|SON;nc|ENSG00000159140|P18583-7|SON;nc|ENSG00000159140|P18583-9|SON	35.15202426646627	0.3000918603816441	5				NaN	NaN	0	NaN	5683	3734	9413
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9420	28.395	NaN	1374.9	30	0	149.06	0.139			+	8910	EEVFSLHG	8	49	459.22283935546875	NaN	0	459.22283935546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EEVFSLHG_	REV__DYSF|p.F1290Lfs*55|1|0.1|ENSG00000135636|chr2:71601522-71601522|T/-|frameshift_variant;REV__DYSF|p.F1960Lfs*6|1|0.23|ENSG00000135636|chr2:71679165-71679165|T/-|frameshift_variant;REV__DYSF|p.P1020Rfs*37|2|0.33|ENSG00000135636|chr2:71570621-71570621|C/-|frameshift_variant;REV__ENSG00000135636|ENST00000410020|DYSF;REV__nc|ENSG00000135636|O75923-10|DYSF;REV__nc|ENSG00000135636|O75923-11|DYSF;REV__nc|ENSG00000135636|O75923-12|DYSF;REV__nc|ENSG00000135636|O75923-14|DYSF;REV__nc|ENSG00000135636|O75923-15|DYSF;REV__nc|ENSG00000135636|O75923-2|DYSF;REV__nc|ENSG00000135636|O75923-3|DYSF;REV__nc|ENSG00000135636|O75923-4|DYSF;REV__nc|ENSG00000135636|O75923-5|DYSF;REV__nc|ENSG00000135636|O75923-6|DYSF;REV__nc|ENSG00000135636|O75923-7|DYSF;REV__nc|ENSG00000135636|O75923-8|DYSF;REV__nc|ENSG00000135636|O75923-9|DYSF;REV__nc|ENSG00000135636|O75923|DYSF	28.2542754592877	1.7418937515398478	5				NaN	NaN	0	NaN	5684	3734	9413
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9434	28.427	NaN	13590	30	0	2580.9	0.214	+			49207	VVMVNQGLTK	10	70	544.8101208508997	1087.6056887685993	2	544.810791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVMVNQGLTK_	ENSG00000134057|ENST00000256442|CCNB1	167.93327368760816	0.004342583126626421	5				NaN	NaN	0	NaN	5695	3737	9433
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9435	28.43	NaN	3423.7	30	0	733.06	0.106	+			11354	FLGGKKPQTP	10	70	536.8095516332755	NaN	0	536.8095703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FLGGKKPQTP_	HERVH-int_dup3527|chrX:4542813-4545870:-|8.094520876636611|0.0139942278604804|9.18|476.0|31|2|sense	32.81241826257853	0.3924360933802784	5				NaN	NaN	0	NaN	5696	3737	9433
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9436	28.432	NaN	3509.7	30	0	1474.4	0.106			+	8181	EAARLAAAL	9	45	443.26149838957264	884.5084438459453	2	443.2608337402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EAARLAAAL_	REV__ENSG00000177303|ENST00000321617|CASKIN2;REV__nc|ENSG00000177303|Q8WXE0-2|CASKIN2	45.97224482568171	0.3502073465782774	5				NaN	NaN	0	NaN	5697	3737	9433
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9437	28.434	NaN	6214.6	30	0	920.64	0.106	+			5703	AVFDGAQVTSK	11	65	561.7930920022961	1121.5716310713922	2	561.7933959960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVFDGAQVTSK_	ENSG00000175274|ENST00000525680|TP53I11	86.18897241530135	0.11437590510873513	5				NaN	NaN	0	NaN	5698	3737	9433
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9438	28.436	NaN	1909.1	30	0	220.64	0.106	+			8685	EEAEQLALK	9	63	515.7739237327571	1029.5332945323141	2	515.288330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EEAEQLALK_	nc|ENSG00000002079|Q9H6N6|MYH16	51.33545320467046	0.2872990594074956	5				NaN	NaN	0	NaN	5699	3737	9433
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9439	28.438	NaN	992.91	30	0	95.044	0.035	+			36771	SIAAAVEVCQ	10	55	495.7483825683594	NaN	0	495.7483825683594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SIAAAVEVCQ_	ENSG00000196569|ENST00000421865|LAMA2;LAMA2|p.A2665Cfs*4|1|0.15|ENSG00000196569|chr6:129491988-129491989|-/G|frameshift_variant;LAMA2|p.A2876Pfs*27|1|0.18|ENSG00000196569|chr6:129505272-129505272|A/-|frameshift_variant;LAMA2|p.A2876Sfs*30|1|0.32|ENSG00000196569|chr6:129505271-129505272|-/A|frameshift_variant;LAMA2|p.K1124Nfs*15|2|0.34|ENSG00000196569|chr6:129313053-129313053|A/-|frameshift_variant;LAMA2|p.M2985Wfs*8|1|0.15|ENSG00000196569|chr6:129512453-129512453|A/-|frameshift_variant;LAMA2|p.N1765Mfs*26|1|0.4|ENSG00000196569|chr6:129393101-129393101|A/-|frameshift_variant;LAMA2|p.V2281Cfs*12|1|0.36|ENSG00000196569|chr6:129456464-129456465|-/T|frameshift_variant	36.446750945000026	0.3805027428805705	5				NaN	NaN	0	NaN	5700	3737	9433
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9451	28.463	NaN	6843.3	30	0	1059	0.214	+			6232	AVSAVVHEY	9	72	487.75130323995006	973.4880535467001	2	487.75103759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVSAVVHEY_	ENSG00000057252|ENST00000367619|SOAT1;nc|ENSG00000057252|P35610-2|SOAT1;nc|ENSG00000057252|P35610-3|SOAT1	84.9155231211612	0.07920012719736333	5				NaN	NaN	0	NaN	5709	3740	9450
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9452	28.467	NaN	5149.6	30	0	916.37	0.106			+	7048	CSYQGALSR	9	60	492.73177859487197	983.449004256544	2	492.7317810058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_CSYQGALSR_	REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-13|TTN;REV__nc|ENSG00000155657|Q8WZ42-2|TTN;REV__nc|ENSG00000155657|Q8WZ42-4|TTN;REV__nc|ENSG00000155657|Q8WZ42-5|TTN;REV__nc|ENSG00000155657|Q8WZ42-7|TTN;REV__nc|ENSG00000155657|Q8WZ42-8|TTN;REV__nc|ENSG00000155657|Q8WZ42|TTN;REV__TTN|p.A12650Gfs*4|1|0.4|ENSG00000155657|chr2:178633489-178633490|-/T|frameshift_variant;REV__TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;REV__TTN|p.D20259Rfs*40|1|0.44|ENSG00000155657|chr2:178583105-178583106|-/T|frameshift_variant;REV__TTN|p.D21555Ifs*6|1|0.33|ENSG00000155657|chr2:178576659-178576659|G/-|frameshift_variant;REV__TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;REV__TTN|p.E15132Sfs*22|1|0.27|ENSG00000155657|chr2:178612094-178612094|C/-|frameshift_variant;REV__TTN|p.E20392Dfs*6|1|0.04|ENSG00000155657|chr2:178582357-178582358|-/TTTAAAATTA|frameshift_variant;REV__TTN|p.E20392Kfs*4|1|0.02|ENSG00000155657|chr2:178582359-178582360|-/TTTT|frameshift_variant;REV__TTN|p.E9224Gfs*8|1|0.04|ENSG00000155657|chr2:178709697-178709698|-/TCTTATGATATCTTGAC|frameshift_variant;REV__TTN|p.F18705Lfs*8|1|0.37|ENSG00000155657|chr2:178590687-178590687|A/-|frameshift_variant;REV__TTN|p.G12742Vfs*2|1|0.05|ENSG00000155657|chr2:178632983-178632983|C/-|frameshift_variant;REV__TTN|p.G14712Dfs*11|1|0.37|ENSG00000155657|chr2:178614341-178614341|G/-|frameshift_variant;REV__TTN|p.G19920Afs*12|1|0.42|ENSG00000155657|chr2:178584961-178584961|G/-|frameshift_variant;REV__TTN|p.G22029Efs*22|2|0.13|ENSG00000155657|chr2:178575125-178575125|T/-|frameshift_variant;REV__TTN|p.I10495Nfs*4|1|0.37|ENSG00000155657|chr2:178685288-178685289|-/T|frameshift_variant;REV__TTN|p.I24998Nfs*2|1|0.35|ENSG00000155657|chr2:178566216-178566217|-/T|frameshift_variant;REV__TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;REV__TTN|p.I9225Cfs*34|1|0.06|ENSG00000155657|chr2:178709695-178709696|-/ATATCCATGAGCA|frameshift_variant;REV__TTN|p.K10923Rfs*104|2|0.23|ENSG00000155657|chr2:178679362-178679362|T/-|frameshift_variant;REV__TTN|p.K11381Nfs*25|1|0.07|ENSG00000155657|chr2:178671133-178671133|T/-|frameshift_variant;REV__TTN|p.K11556Sfs*15|1|0.39|ENSG00000155657|chr2:178652287-178652287|T/-|frameshift_variant;REV__TTN|p.K14271Qfs*5|1|0.02|ENSG00000155657|chr2:178617351-178617352|-/G|frameshift_variant;REV__TTN|p.K26626Nfs*34|1|0.34|ENSG00000155657|chr2:178561331-178561331|T/-|frameshift_variant;REV__TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;REV__TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;REV__TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant;REV__TTN|p.N13487Tfs*49|1|0.34|ENSG00000155657|chr2:178621335-178621335|T/-|frameshift_variant;REV__TTN|p.N15496Ifs*16|1|0.09|ENSG00000155657|chr2:178610116-178610116|T/-|frameshift_variant;REV__TTN|p.P16126Rfs*3|1|0.25|ENSG00000155657|chr2:178607301-178607302|TG/-|frameshift_variant;REV__TTN|p.P22810Hfs*10|1|0.03|ENSG00000155657|chr2:178572780-178572781|-/AAAT|frameshift_variant;REV__TTN|p.V10632Yfs*16|1|0.16|ENSG00000155657|chr2:178683254-178683254|T/-|frameshift_variant;REV__TTN|p.V11008Sfs*13|1|0.33|ENSG00000155657|chr2:178678146-178678147|-/T|frameshift_variant;REV__TTN|p.V11345Ffs*4|1|0.4|ENSG00000155657|chr2:178672044-178672044|T/-|frameshift_variant;REV__TTN|p.V13823*|1|0.28|ENSG00000155657|chr2:178620027-178620027|C/-|frameshift_variant;REV__TTN|p.V22573Cfs*4|2|0.31|ENSG00000155657|chr2:178573492-178573492|C/-|frameshift_variant;REV__TTN|p.V27442Cfs*4|1|0.05|ENSG00000155657|chr2:178558107-178558108|-/A|frameshift_variant	107.00750918261382	0.032051501805654005	5				NaN	NaN	0	NaN	5710	3740	9450
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9453	28.469	NaN	3935	30	0	568.2	0.106	+			27971	MVLPKQAPM	9	68	515.7739237327571	1029.5332945323141	2	515.774658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_MVLPKQAPM(Oxidation (M))_	ENST00000393784.7_1_5:172378203-172378416:+|nuORF	57.81127852772723	0.2318599694398087	5				NaN	NaN	0	NaN	5711	3740	9450
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9454	28.47	NaN	1073.8	30	0	125.09	0.036			+	-1	VPMLDAKLVP	10	51	549.8133999239942	1097.6122469147883	2	550.3161010742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_VPM(Oxidation (M))LDAKLVP_	REV__ENSG00000164946|ENST00000380880|FREM1;REV__FREM1|p.S1085Afs*5|1|0.39|ENSG00000164946|chr9:14806682-14806682|T/-|frameshift_variant;REV__FREM1|p.T1560Qfs*46|1|0.35|ENSG00000164946|chr9:14775969-14775969|C/-|frameshift_variant	20.94693142431847	0.7087701759873708	5				NaN	NaN	0	NaN	5712	3740	9450
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9468	28.5	NaN	4016	30	0	454.67	0.214	+			38885	SSNVQVMLK	9	70	503.27401414170197	1004.533475350204	2	503.27392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSNVQVMLK_	ENST00000456324.5_1_19:36726911-36727052:+|nuORF	78.26377905018397	0.10505600812668463	5				NaN	NaN	0	NaN	5723	3743	9467
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9469	28.504	NaN	4496.1	30	0	520.58	0.106	+			49552	VYASDRATF	9	70	515.2531655083809	1028.4917780835617	2	515.25341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYASDRATF_	ENSG00000198721|ENST00000380118|ECI2;ENST00000380120.6_1_6:4116110-4130812:-|nuORF;ENST00000464057.5_1_6:4116110-4125894:-|nuORF;ENST00000464583.5_1_6:4119386-4125894:-|nuORF;ENST00000496241.6_1_6:4116110-4130478:-|nuORF;nc|ENSG00000198721|O75521-2|ECI2	61.691277971877994	0.19951612995419254	5				NaN	NaN	0	NaN	5724	3743	9467
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9470	28.506	NaN	3575.7	30	0	1410.1	0.106	+			24012	LEDLKVDK	8	56	480.27390335816676	958.5332537831335	2	480.2735900878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LEDLKVDK_	ENSG00000137575|ENST00000260130|SDCBP;ENST00000519115.5_1_8:59477592-59490768:+|nuORF;ENST00000522843.5_1_8:59477592-59488665:+|nuORF;nc|ENSG00000137575|O00560-2|SDCBP	76.7741389293348	0.3504530765139327	5				NaN	NaN	0	NaN	5725	3743	9467
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9471	28.508	NaN	2495.5	30	0	837.96	0.106	+			16619	HGTVVALRY	9	62	508.2867526598178	1014.5589523864356	2	508.2869567871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HGTVVALRY_	ENSG00000110013|ENST00000263593|SIAE;nc|ENSG00000110013|Q9HAT2-2|SIAE	49.44154591367651	0.3095138337212152	5				NaN	NaN	0	NaN	5726	3743	9467
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9472	28.509	NaN	10678	30	0	2329.6	0.106	+			4620	ATLNSIVAK	9	74	458.77654790702763	915.5385428808553	2	458.7760925292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATLNSIVAK_	ENSG00000007944|ENST00000356840|MYLIP;MYLIP|p.K199Rfs*26|1|0.07|ENSG00000007944|chr6:16143150-16143151|-/GAATT|frameshift_variant;MYLIP|p.R317Kfs*8|1|0.09|ENSG00000007944|chr6:16145014-16145015|-/A|frameshift_variant	117.5257442709337	0.022697614825424036	5				NaN	NaN	0	NaN	5727	3743	9467
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9473	28.511	NaN	1880.9	30	0	363.21	0.032	+			48838	VVAVGRAL	8	56	392.75550951965874	783.4964661061175	2	392.7554016113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VVAVGRAL_	ENSG00000167986|ENST00000301764|DDB1;ENST00000414411.3_1_11:61081295-61081943:-|nuORF	74.51659920185547	0.36926395944126233	5				NaN	NaN	0	NaN	5728	3743	9467
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9489	28.545	NaN	5587.9	30	0	635.92	0.214				-1	VSQLLMCR	8	65	503.76213031202604	1005.5097076908521	2	503.7620849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_VSQLLMC(Carbamidomethyl (C))R_	ENST00000472364.1_1_21:47974114-47978399:+|nuORF;ENST00000481883.1_1_21:47977249-47978399:+|nuORF	60.97194046774394	0.49215940876911696	5				NaN	NaN	0	NaN	5741	3746	9488
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9490	28.548	NaN	2367.7	30	0	279.63	0.106				-1	 	0	56	468.24705758179584	467.23978111519585	1	468.2474670410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5742	3746	9488
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9491	28.55	NaN	1261.3	30	0	99.179	0.106			+	10127	ESPNPLYEL	9	61	531.2597357702713	NaN	0	531.2595825195312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ESPNPLYEL_	REV__ENSG00000168827|ENST00000486715|GFM1;REV__ENST00000312756.4_1_3:158369993-158373740:+|nuORF;REV__GFM1|p.R526Efs*27|1|0.36|ENSG00000168827|chr3:158666358-158666358|T/-|frameshift_variant;REV__nc|ENSG00000168827|Q96RP9-2|GFM1	66.42927471994793	0.121898005645852	5				NaN	NaN	0	NaN	5743	3746	9488
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9492	28.552	NaN	2307	30	0	795.31	0.106				-1	VLCDRVLDATK	11	53	430.56762278819826	1288.6810389647949	3	430.56768798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_VLC(Carbamidomethyl (C))DRVLDATK_	ENST00000451400.1_1_2:105122566-105122662:+|nuORF	35.17822180527639	0.6208003396870814	5				NaN	NaN	0	NaN	5744	3746	9488
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9493	28.554	NaN	1417.3	30	0	180.92	0.106	+			4915	ATQLLKLAH	9	56	497.8051861303967	993.5958193275934	2	497.8055419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATQLLKLAH_	ENSG00000148303|ENST00000323345|RPL7A;ENST00000424559.2_1_22:19780074-19780431:+|nuORF;ENST00000434317.1_1_7:102395625-102396051:+|nuORF;ENST00000437848.1_1_1:46117146-46117242:-|nuORF;ENST00000463740.5_1_9:136215098-136217195:+|nuORF;ENST00000468834.1_1_10:33346560-33347304:-|nuORF;ENST00000473054.1_1_14:68805457-68806021:-|nuORF;ENST00000485706.5_1_9:136216467-136216912:+|nuORF;ENST00000486157.1_1_5:78825151-78825526:+|nuORF	70.8162118820467	0.13725933411854815	5				NaN	NaN	0	NaN	5745	3746	9488
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9494	28.555	NaN	2167.6	30	0	193.14	0.034	+			8740	EEFKTGKI	8	56	476.261509271392	950.508465609584	2	476.7640686035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EEFKTGKI_	tr|U7T5E1|U7T5E1_FUSNU16SrRNA(cytosine(967)-C(5))-methyltransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00032PE=3SV=1	45.9519527083369	0.6193794311207887	5				NaN	NaN	0	NaN	5746	3746	9488
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9505	28.581	NaN	4118.1	30	0	909.43	0.214				-1	TVMMPLRI	8	69	488.7689956308399	975.5234383284799	2	488.76910400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_TVMM(Oxidation (M))PLRI_	ENST00000396987.7_1_8:41479719-41480088:+|nuORF	63.30626980617807	0.4690498839812213	5				NaN	NaN	0	NaN	5754	3749	9504
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9506	28.584	NaN	3879.4	30	0	503.05	0.106	+			29532	PEERPPGLPL	10	55	368.87374904455237	1103.599417733857	3	368.87408447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PEERPPGLPL_	ENSG00000204469|ENST00000376033|PRRC2A;nc|ENSG00000204469|P48634-2|PRRC2A;nc|ENSG00000204469|P48634-3|PRRC2A;PRRC2A|p.A1596Gfs*24|1|0.1|ENSG00000204469|chr6:31634300-31634301|-/G|frameshift_variant;PRRC2A|p.G1731Wfs*35|1|0.59|ENSG00000204469|chr6:31635155-31635156|-/C|frameshift_variant;PRRC2A|p.G1884Afs*12|1|0.18|ENSG00000204469|chr6:31636228-31636228|C/-|frameshift_variant;PRRC2A|p.K1685Rfs*9|1|0.21|ENSG00000204469|chr6:31634864-31634864|C/-|frameshift_variant	45.97224482568171	0.49411383603842696	5				NaN	NaN	0	NaN	5755	3749	9504
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9507	28.586	NaN	3402.2	30	0	668.88	0.106	+			31002	QESEARIQQL	10	66	601.3121223176475	1200.609691702095	2	601.3121337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QESEARIQQL_	ENSG00000100242|ENST00000689035|SUN2;ENST00000469086.5_1_22:39136824-39138467:-|nuORF;ENST00000477262.5_1_22:39135390-39138407:-|nuORF;nc|ENSG00000100242|Q9UH99-2|SUN2;nc|ENSG00000100242|Q9UH99-3|SUN2	104.01359247289065	0.06577755598965461	5				NaN	NaN	0	NaN	5756	3749	9504
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9508	28.588	NaN	2511.2	30	0	129.35	0.106			+	11893	FTQAGNTTLQ	10	69	540.7695205177081	NaN	0	540.7697143554688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FTQAGNTTLQ_	REV__ENSG00000198483|ENST00000355594|ANKRD35	42.86426827375447	0.3507156137006061	5				NaN	NaN	0	NaN	5757	3749	9504
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9509	28.59	NaN	2001.2	30	0	311.54	0.106				-1	 	0	53	435.2539441136846	434.2466676470846	1	435.25799560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5758	3749	9504
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9510	28.592	NaN	2178.1	30	0	155.02	0.038	+			28752	NPAIRVFEYD	10	74	612.3078648112011	1222.601176689202	2	612.3092651367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NPAIRVFEYD_	ENSG00000130768|ENST00000373894|SMPDL3B;ENST00000548116.5_1_1:28271947-28285346:+|nuORF;nc|ENSG00000130768|Q92485-2|SMPDL3B	39.252832667884924	0.5560298534376815	5				NaN	NaN	0	NaN	5759	3749	9504
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9525	28.623	NaN	2293.2	30	0	232.23	0.214	+			18757	ITLVDNTI	8	55	444.755323643222	NaN	0	444.75494384765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ITLVDNTI_	ENSG00000170927|ENST00000371117|PKHD1;nc|ENSG00000170927|P08F94-2|PKHD1	71.29570347882199	1.7418937515398478	5				NaN	NaN	0	NaN	5771	3752	9524
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9526	28.626	NaN	2892.7	30	0	339.17	0.106	+			734	AEAYLGKTV	9	66	476.261509271392	950.508465609584	2	476.2606506347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEAYLGKTV_	ENSG00000109971|ENST00000534624|HSPA8;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;ENST00000456928.2_1_12:4206979-4207195:+|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;HSPA8|p.K569Dfs*6|1|0.3|ENSG00000109971|chr11:123058302-123058303|TC/-|frameshift_variant;nc|ENSG00000109971|P11142-2|HSPA8	80.45461616416974	0.09558281504443908	5				NaN	NaN	0	NaN	5772	3752	9524
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9527	28.628	NaN	1487.2	30	0	431.11	0.106	+			30141	PSAEAYLLHT	10	61	551.2804565429688	NaN	0	551.2804565429688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PSAEAYLLHT_	TBX6|p.P353T|1|0.25|ENSG00000149922|chr16:30086552-30086552|G/T|missense_variant	27.882242232435846	0.4086243523356342	5				NaN	NaN	0	NaN	5773	3752	9524
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9528	28.63	NaN	1634.3	30	0	138.77	0.106			+	-1	VPVVNKCKM	9	58	517.2788696289062	NaN	0	517.2788696289062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_VPVVNKCKM(Oxidation (M))_	REV__ENSG00000140009|ENST00000341099|ESR2;REV__ENST00000555483.5_1_14:64699857-64724116:-|nuORF;REV__nc|ENSG00000140009|Q92731-7|ESR2	47.91560031466742	0.22105767942158736	5				NaN	NaN	0	NaN	5774	3752	9524
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9529	28.632	NaN	930.6	30	0	87.719	0.106	+			6599	AYNNVKACL	9	50	526.7642539209147	NaN	0	526.76318359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_AYNNVKAC(Carbamidomethyl (C))L_	ENSG00000124535|ENST00000380773|WRNIP1;nc|ENSG00000124535|Q96S55-2|WRNIP1;nc|ENSG00000124535|Q96S55-3|WRNIP1;nc|ENSG00000124535|Q96S55-4|WRNIP1	55.50420428727701	0.16876052142120426	5				NaN	NaN	0	NaN	5775	3752	9524
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9530	28.633	NaN	1171	30	0	195.05	0.034			+	25748	LSAALLDQP	9	50	464.2610378358178	926.5075227384356	2	464.2603759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSAALLDQP_	REV__ENSG00000134398|ENST00000256797|ERN2;REV__ERN2|p.L515Wfs*48|1|0.41|ENSG00000134398|chr16:23700665-23700665|G/-|frameshift_variant;REV__ERN2|p.Q822Rfs*35|1|0.26|ENSG00000134398|chr16:23692019-23692019|G/-|frameshift_variant	58.78195531508484	0.22376836668196862	5				NaN	NaN	0	NaN	5776	3752	9524
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9543	28.661	NaN	1918.7	30	0	149.7	0.214	+			51177	YPGQPHPAL	9	60	490.2535076511334	978.4924623690669	2	490.2537841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YPGQPHPAL_	ENSG00000114315|ENST00000232424|HES1	50.0245360154114	0.3026755932229825	5				NaN	NaN	0	NaN	5786	3755	9542
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9544	28.664	NaN	2594.3	30	0	292.09	0.106	+			704	AEAPSQVRL	9	61	485.7695704350143	969.5245879368287	2	485.7696533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEAPSQVRL_	ENSG00000033100|ENST00000035307|CHPF2;nc|ENSG00000033100|Q9P2E5-2|CHPF2	58.22992032128504	0.22837015374068087	5				NaN	NaN	0	NaN	5787	3755	9542
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9545	28.666	NaN	5292	30	0	1681.5	0.106	+			39008	SSSGFVAIK	9	48	448.24786205646706	894.4811711797341	2	448.2478332519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSSGFVAIK_	ENSG00000198478|ENST00000369838|SH3BGRL2;SH3BGRL2|p.P55Rfs*41|2|0.28|ENSG00000198478|chr6:79673727-79673727|C/-|frameshift_variant	64.20726635412375	0.17854274437659667	5				NaN	NaN	0	NaN	5788	3755	9542
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9546	28.668	NaN	1914.6	30	0	134.24	0.106	+			18508	ISIHVGQAG	9	56	441.2459355559096	880.4773181786193	2	441.2460021972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ISIHVGQAG_	ENSG00000075886|ENST00000321253|TUBA3D;ENSG00000123416|ENST00000336023|TUBA1B;ENSG00000152086|ENST00000312988|TUBA3E;ENSG00000167552|ENST00000301071|TUBA1A;ENSG00000167553|ENST00000301072|TUBA1C;ENSG00000198033|ENST00000400113|TUBA3C;ENST00000430114.1_1_1:202827276-202830656:-|nuORF;ENST00000443294.5_1_1:202822362-202830656:-|nuORF;ENST00000548363.1_1_12:49580068-49582762:-|nuORF;ENST00000550254.1_1_12:49580073-49582762:-|nuORF;ENST00000551324.5_1_12:49523262-49525083:-|nuORF;nc|ENSG00000123416|P68363-2|TUBA1B;nc|ENSG00000198033|P0DPH7-2|TUBA3C;TUBA3C|p.G144Afs*24|1|0.32|ENSG00000198033|chr13:19177554-19177554|A/-|frameshift_variant;TUBA3C|p.T361Rfs*18|1|0.17|ENSG00000198033|chr13:19174136-19174136|G/-|frameshift_variant;TUBA3D|p.G366Efs*13|1|0.17|ENSG00000075886|chr2:131482588-131482588|G/-|frameshift_variant;TUBA3D|p.V328Pfs*54|1|0.45|ENSG00000075886|chr2:131480665-131480666|-/CCCAAAGA|frameshift_variant;TUBA3E|p.Q176Rfs*14|1|0.58|ENSG00000152086|chr2:130194316-130194316|G/-|frameshift_variant	44.377184641726394	0.36891676396732553	5				NaN	NaN	0	NaN	5789	3755	9542
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9547	28.67	NaN	1936.1	30	0	139.1	0.035	+			7782	DPEGSRITY	9	59	519.2482711196169	1036.4819893060337	2	519.2486572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DPEGSRITY_	ENSG00000124596|ENST00000424266|OARD1;ENST00000465893.1_1_6:41037763-41039373:-|nuORF	96.0336014099291	0.047854655524928534	5				NaN	NaN	0	NaN	5790	3755	9542
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9558	28.694	NaN	2716.9	30	0	476.31	0.214	+			42366	TAIGMPVEK	9	61	473.2571363018269	944.4997196704538	2	473.2571716308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAIGMPVEK_	ENSG00000109736|ENST00000355443|MFSD10;ENST00000509676.1_1_4:2934766-2935650:-|nuORF;MFSD10|p.S111Gfs*48|1|0.44|ENSG00000109736|chr4:2933125-2933147|GGGCGCCTCCCCAAGCAGTCAGA/-|frameshift_variant	60.11826168202944	0.21262886028301267	5				NaN	NaN	0	NaN	5798	3758	9557
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9559	28.697	NaN	2627.9	30	0	404.69	0.106			+	28232	NCKKVVDPG	9	53	480.2526328767607	958.4907128203214	2	480.252197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NCKKVVDPG_	REV__ENSG00000005436|ENST00000321027|GCFC2;REV__GCFC2|p.W710Mfs*3|1|0.22|ENSG00000005436|chr2:75666029-75666030|-/T|frameshift_variant;REV__nc|ENSG00000005436|P16383-2|GCFC2	49.44154591367651	0.3095138337212152	5				NaN	NaN	0	NaN	5799	3758	9557
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9560	28.699	NaN	4531.6	30	0	1223.5	0.106			+	51339	YSPSIHTP	8	61	451.2241746674434	900.4337964016868	2	451.22412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YSPSIHTP_	REV__ENST00000527370.5_1_11:67264693-67266053:-|nuORF	31.954861631926434	0.7126016770032289	5				NaN	NaN	0	NaN	5800	3758	9557
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9561	28.701	NaN	2611.5	30	0	465.72	0.106			+	-1	LAMEHCARS	9	62	537.7457491219078	1073.4769453106155	2	538.2487182617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_LAMEHC(Carbamidomethyl (C))ARS_	REV__ENSG00000104907|ENST00000357720|TRMT1;REV__ENST00000443260.1_1_X:144712299-144712695:+|nuORF;REV__ENST00000593157.5_1_19:13216299-13227549:-|nuORF;REV__nc|ENSG00000104907|Q9NXH9-2|TRMT1	37.15910966729921	0.4535818937225704	5				NaN	NaN	0	NaN	5801	3758	9557
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9562	28.703	NaN	2637	30	0	290.29	0.106	+			50451	YADVGGKQF	9	58	492.7431397698797	NaN	0	492.742919921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YADVGGKQF_	ENSG00000180879|ENST00000370086|SSR4;ENST00000460616.5_1_X:153061851-153063636:+|nuORF;ENST00000485612.5_1_X:153061851-153063885:+|nuORF	52.936696900407355	0.1864545979552969	5				NaN	NaN	0	NaN	5802	3758	9557
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9563	28.704	NaN	1325.4	30	0	138.7	0.037	+			29016	NSQIQRATAH	10	60	563.2905281847518	1124.5665034363035	2	563.7977905273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NSQIQRATAH_	nc|ENSG00000050628|P43115-5|PTGER3	28.081489160057373	0.6505064946289502	5				NaN	NaN	0	NaN	5803	3758	9557
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9576	28.732	NaN	4700.1	30	0	612.05	0.214	+			4097	ATDPNILGR	9	68	478.76149593424276	955.5084389352855	2	478.761474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATDPNILGR_	ENSG00000253729|ENST00000314191|PRKDC;ENST00000536483.1_1_8:48686736-48691238:-|nuORF;nc|ENSG00000253729|P78527-2|PRKDC	77.31757898189308	0.1091473830098891	5				NaN	NaN	0	NaN	5813	3761	9575
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9577	28.735	NaN	2101.6	30	0	227.85	0.106	+			43330	TGASVIRAY	9	57	469.2577718782538	936.5009908233076	2	469.2585144042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TGASVIRAY_	ENSG00000108846|ENST00000285238|ABCC3;ENST00000502426.5_1_17:48736553-48755440:+|nuORF;nc|ENSG00000108846|O15438-2|ABCC3;nc|ENSG00000108846|O15438-4|ABCC3	80.45461616416974	0.09558281504443908	5				NaN	NaN	0	NaN	5814	3761	9575
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9578	28.737	NaN	4782.8	30	0	764.75	0.106			+	12761	GELGVMLLM	9	71	481.7549884223128	961.4954239114256	2	481.7518005371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GELGVMLLM_	REV__tr|U7ST80|U7ST80_FUSNUFormiminotetrahydrofolatecyclodeaminaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01323PE=4SV=1	50.0245360154114	0.3026755932229825	5				NaN	NaN	0	NaN	5815	3761	9575
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9579	28.739	NaN	1207.1	30	0	150.1	0.106	+			26704	LVIDNGSGMCK	11	51	597.2871340700701	1192.5597152069402	2	597.2863159179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_LVIDNGSGMC(Carbamidomethyl (C))K_	ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196604|ENST00000409914|POTEF;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000204434|Q9BYX7|POTEKP;POTEE|p.N792Kfs*34|1|0.2|ENSG00000188219|chr2:131263828-131263829|-/A|frameshift_variant;POTEF|p.R728Gfs*16|3|0.06|ENSG00000196604|chr2:130075290-130075290|G/-|frameshift_variant	42.33807565288922	0.5259510355945483	5				NaN	NaN	0	NaN	5816	3761	9575
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9580	28.741	NaN	1159.3	30	0	88.856	0.106			+	-1	KLMIFVCLE	9	59	576.811826002455	NaN	0	576.8116455078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_KLMIFVC(Carbamidomethyl (C))LE_	REV__ENST00000490457.5_1_3:40567331-40615968:+|nuORF	38.80614096846853	0.28164298475537564	5				NaN	NaN	0	NaN	5817	3761	9575
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9581	28.743	NaN	2247.1	30	0	876.6	0.038			+	16919	HPLQSVFQKI	10	42	399.56483362004536	NaN	0	399.5647277832031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HPLQSVFQKI_	REV__ENSG00000139719|ENST00000267199|VPS33A;REV__VPS33A|p.F371Lfs*4|1|0.18|ENSG00000139719|chr12:122239929-122239929|A/-|frameshift_variant;REV__VPS33A|p.G459Afs*86|7|0.14|ENSG00000139719|chr12:122235850-122235850|C/-|frameshift_variant;REV__VPS33A|p.G552Afs*2|1|0.26|ENSG00000139719|chr12:122232382-122232382|C/-|frameshift_variant;REV__VPS33A|p.R460Qfs*17|2|0.28|ENSG00000139719|chr12:122235849-122235850|-/C|frameshift_variant	25.125986553469783	0.41767453237088564	5				NaN	NaN	0	NaN	5818	3761	9575
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9596	28.774	NaN	35855	30	0	8063.4	0.214	+			40280	STSQTFIYK	9	79	537.7768911281693	1073.5392293231384	2	537.7772827148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STSQTFIYK_	ENSG00000004487|ENST00000400181|KDM1A;nc|ENSG00000004487|O60341|KDM1A	204.4243087208965	1.4601778531241419E-05	5				NaN	NaN	0	NaN	5830	3764	9595
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9597	28.777	NaN	12345	30	0	2874	0.106	+			40313	STSSVIMMK	9	70	492.24826832303626	982.4819837128725	2	492.2489929199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STSSVIMMK_	ENST00000521804.1_1_8:142264568-142318349:-|nuORF	134.81075121484326	0.012914550297035062	5				NaN	NaN	0	NaN	5831	3764	9595
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9598	28.779	NaN	2368.3	30	0	177.46	0.106				-1	KKMIESMSR	9	69	563.2905281847518	1124.5665034363035	2	563.2907104492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_KKMIESM(Oxidation (M))SR_	ENSG00000159873|ENST00000249064|CCDC117;nc|ENSG00000159873|Q8IWD4-2|CCDC117;nc|ENSG00000159873|Q8IWD4-3|CCDC117;nc|ENSG00000159873|Q8IWD4-4|CCDC117	45.97224482568171	0.3502073465782774	5				NaN	NaN	0	NaN	5832	3764	9595
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9599	28.781	NaN	1548.1	30	0	140.25	0.106	+			33317	RGSENEDLW	9	61	553.2505493164062	NaN	0	553.2505493164062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RGSENEDLW_	ENSG00000162928|ENST00000295030|PEX13;PEX13|p.A212V|1|0.25|ENSG00000162928|chr2:61031961-61031961|C/T|missense_variant	28.081489160057373	0.33578952234132536	5				NaN	NaN	0	NaN	5833	3764	9595
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9600	28.783	NaN	2146.1	30	0	285.8	0.106				-1	 	0	52	456.7137687876211	911.4129846420423	2	456.71417236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5834	3764	9595
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9601	28.785	NaN	1187	30	0	136.72	0.034			+	10948	FDVAQTKL	8	56	461.2550964355469	NaN	0	461.2550964355469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FDVAQTKL_	REV__ENSG00000121067|ENST00000504102|SPOP;REV__ENST00000507551.1_1_17:47679228-47679363:-|nuORF;REV__SPOP|p.P367Hfs*5|1|0.06|ENSG00000121067|chr17:49600403-49600403|G/-|frameshift_variant	30.503639358989545	1.7418937515398478	5				NaN	NaN	0	NaN	5835	3764	9595
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9602	28.785	NaN	1360.8	30	0	204.85	0.14	+			6274	AVSQDVLMK	9	44	495.76743282347064	989.5203127137413	2	495.7676086425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AVSQDVLMK_	ENSG00000117408|ENST00000372343|IPO13	29.170058357718403	0.5306379469863586	5				NaN	NaN	0	NaN	5836	3764	9595
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9616	28.817	NaN	10711	30	0	3190	0.214	+			12117	GAFGKPSSL	9	56	432.23473072780473	862.4549085224095	2	432.23455810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GAFGKPSSL_	ENSG00000099812|ENST00000215582|MISP	79.71258880314673	0.09879134589249085	5				NaN	NaN	0	NaN	5847	3767	9615
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9617	28.82	NaN	3032.3	30	0	452.11	0.106			+	51040	YLAQQDPAL	9	59	509.76377646503715	1017.5129999968743	2	509.7637634277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YLAQQDPAL_	REV__ENSG00000197363|ENST00000359971|ZNF517;REV__ENST00000530879.1_1_8:146029013-146029199:+|nuORF;REV__ZNF517|p.C121Afs*105|2|0.1|ENSG00000197363|chr8:144807272-144807272|G/-|frameshift_variant	61.691277971877994	0.19951612995419254	5				NaN	NaN	0	NaN	5848	3767	9615
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9618	28.822	NaN	2036.5	30	0	494.02	0.106				-1	ELMDTVHN	8	56	487.7159057758583	973.4172586185166	2	487.7158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_ELM(Oxidation (M))DTVHN_	ENSG00000154188|ENST00000517746|ANGPT1;ENST00000518386.5_1_8:108306212-108334178:-|nuORF;ENST00000521950.1_1_8:108296908-108334178:-|nuORF;nc|ENSG00000154188|Q15389-2|ANGPT1	34.172542307311794	0.6954784234644539	5				NaN	NaN	0	NaN	5849	3767	9615
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9619	28.824	NaN	1444.4	30	0	247.14	0.106	+			1115	AELLCPLSLW	10	53	601.3187141147879	1200.6228752963757	2	601.318603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_AELLC(Carbamidomethyl (C))PLSLW_	ENSG00000164010|ENST00000372517|ERMAP	47.657333605630114	0.47858658696240314	5				NaN	NaN	0	NaN	5850	3767	9615
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9620	28.826	NaN	2099.6	30	0	195.71	0.106			+	9488	EKSIKQKF	8	59	504.2980877358996	NaN	0	504.29840087890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EKSIKQKF_	REV__ENSG00000152382|ENST00000367874|TADA1	45.97224482568171	1.7418937515398478	5				NaN	NaN	0	NaN	5851	3767	9615
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9621	28.828	NaN	1611.2	30	0	386.78	0.035			+	2780	ARPSLRGLE	9	48	499.7901916503906	NaN	0	499.7901916503906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ARPSLRGLE_	REV__ENSG00000113916|ENST00000406870|BCL6;REV__nc|ENSG00000113916|P41182-2|BCL6	43.650786325866115	0.2504488100985368	5				NaN	NaN	0	NaN	5852	3767	9615
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9622	28.828	NaN	2150.7	30	0	476.79	0.144			+	4020	ATCSTLDLRRA	11	48	402.88063945164623	1205.6200889551387	3	403.21435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATCSTLDLRRA_	REV__KBTBD6|p.N172S|1|0.14|ENSG00000165572|chr13:41131997-41131997|T/C|missense_variant	36.31764250033197	0.6083289427130232	5				NaN	NaN	0	NaN	5853	3767	9615
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9636	28.86	NaN	7383.5	30	0	2057.9	0.214	+			23716	LAVDKSASL	9	62	452.26069796789693	902.5068430025939	2	452.26068115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LAVDKSASL_	ENSG00000065526|ENST00000375759|SPEN;SPEN|p.A2105Lfs*33|1|0.46|ENSG00000065526|chr1:15932548-15932548|G/-|frameshift_variant;SPEN|p.A2251Qfs*102|3|0.29|ENSG00000065526|chr1:15932985-15932985|C/-|frameshift_variant	117.81106730687013	0.02252488733980868	5				NaN	NaN	0	NaN	5864	3770	9635
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9637	28.864	NaN	5932.2	30	0	1266	0.106			+	17898	IGFCELLAP	9	65	481.7549884223128	961.4954239114256	2	482.2601623535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IGFCELLAP_	REV__ENSG00000163328|ENST00000392552|GPR155	25.450171626174864	0.5654022654467333	5				NaN	NaN	0	NaN	5865	3770	9635
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9638	28.865	NaN	4859	30	0	1720.5	0.106	+			33624	RLTAPPLQ	8	62	448.2715866280424	894.5286203228849	2	448.2714538574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RLTAPPLQ_	ENST00000360271.3_1_9:139972605-139973049:+|nuORF	40.77816245573522	0.6514838689002179	5				NaN	NaN	0	NaN	5866	3770	9635
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9639	28.867	NaN	2879.8	30	0	309.96	0.106	+			16966	HPQPGAVEL	9	55	474.2499275949674	946.4853022567348	2	474.2506408691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HPQPGAVEL_	ENSG00000084774|ENST00000264705|CAD	47.657333605630114	0.33044192980041115	5				NaN	NaN	0	NaN	5867	3770	9635
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9640	28.869	NaN	8790.2	30	0	860.48	0.106	+			49646	VYIKHPVSL	9	67	528.3155926525279	1054.6166323718558	2	528.316650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VYIKHPVSL_	ENSG00000099341|ENST00000215071|PSMD8;ENST00000592001.5_1_19:38865430-38871817:+|nuORF	143.8867514904718	0.008656634767784652	5				NaN	NaN	0	NaN	5868	3770	9635
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9641	28.871	NaN	1556.9	30	0	319.43	0.035	+			36636	SGGWPNGLTV	10	57	494.2479290298636	986.4813051265272	2	494.2477722167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SGGWPNGLTV_	ENSG00000123384|ENST00000243077|LRP1;LRP1|p.R3469Gfs*24|2|0.38|ENSG00000123384|chr12:57201552-57201552|C/-|frameshift_variant	42.86426827375447	0.522752283233888	5				NaN	NaN	0	NaN	5869	3770	9635
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9642	28.871	NaN	3721.5	30	0	518.65	0.139	+			36188	SELITKAVA	9	64	466.27700520849805	930.5394574837961	2	466.2765808105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SELITKAVA_	ENSG00000124575|ENST00000244534|H1-3;ENSG00000168298|ENST00000304218|H1-4;ENSG00000184357|ENST00000331442|H1-5;ENSG00000187837|ENST00000343677|H1-2	66.96192283764107	0.15557981141143568	5				NaN	NaN	0	NaN	5870	3770	9635
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9656	28.903	NaN	23869	30	0	6163.6	0.214	+			49648	VYIKHPVSL	9	58	352.5464203895365	1054.6174317688094	3	352.54644775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYIKHPVSL_	ENSG00000099341|ENST00000215071|PSMD8;ENST00000592001.5_1_19:38865430-38871817:+|nuORF	76.84663266511073	0.11118375776443899	5				NaN	NaN	0	NaN	5881	3773	9655
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9657	28.906	NaN	6055.5	30	0	1043.7	0.106	+			42993	TEKKEIAIL	9	70	522.8182442351646	1043.621935537129	2	522.81884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEKKEIAIL_	CCPG1|p.K524Nfs*118|1|0.26|ENSG00000260916|chr15:55360201-55360201|T/-|frameshift_variant;ENSG00000260916|ENST00000442196|CCPG1;ENST00000568372.5_1_15:55651699-55664264:-|nuORF;nc|ENSG00000260916|Q9ULG6-2|CCPG1;nc|ENSG00000260916|Q9ULG6-4|CCPG1;nc|ENSG00000260916|Q9ULG6|CCPG1	85.86182877749512	0.07653218437724067	5				NaN	NaN	0	NaN	5882	3773	9655
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9658	28.908	NaN	3240.1	30	0	691.62	0.106	+			45820	VAIKAGTTL	9	52	437.2738177915088	872.5330826498176	2	437.273681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VAIKAGTTL_	ENSG00000166471|ENST00000528080|TMEM41B;ENST00000524543.5_1_11:9304973-9316821:-|nuORF;ENST00000533867.1_1_11:9304973-9309374:-|nuORF	69.6276240434122	0.14239879520340665	5				NaN	NaN	0	NaN	5883	3773	9655
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9659	28.91	NaN	3291.4	30	0	294.96	0.106	+			43967	TPEEKSAVTAL	11	67	573.3063421130896	1144.5981312929791	2	573.306396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TPEEKSAVTAL_	ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF	58.62960593111931	0.3356877741313683	5				NaN	NaN	0	NaN	5884	3773	9655
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9660	28.912	NaN	2417.9	30	0	540.09	0.106			+	44167	TQQSFIIPK	9	66	531.3035532105008	1060.5925534878015	2	531.3043212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TQQSFIIPK_	REV__ALMS1|p.L2987Ffs*8|1|0.38|ENSG00000116127|chr2:73490911-73490911|T/-|frameshift_variant;REV__ALMS1|p.P923S|1|0.06|ENSG00000116127|chr2:73449294-73449294|C/T|missense_variant;REV__ALMS1|p.S3695Afs*27|1|0.24|ENSG00000116127|chr2:73572954-73572954|A/-|frameshift_variant;REV__ENSG00000116127|ENST00000613296|ALMS1;REV__nc|ENSG00000116127|Q8TCU4-2|ALMS1;REV__nc|ENSG00000116127|Q8TCU4-3|ALMS1	69.6276240434122	0.14239879520340665	5				NaN	NaN	0	NaN	5885	3773	9655
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9661	28.914	NaN	3737.4	30	0	2559.2	0.037			+	-1	WCVLVELCR	9	53	589.2972739488092	1176.5799949644183	2	589.2984008789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_WC(Carbamidomethyl (C))VLVELCR_	REV__HERVH-int_dup3527|chrX:4542813-4545870:-|8.094520876636611|0.0139942278604804|9.18|476.0|82|1|anti-sense	53.351449002276354	0.2690372970092375	5				NaN	NaN	0	NaN	5886	3773	9655
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9662	28.914	NaN	1905.2	30	0	260.84	0.141	+			22068	KSKVEYKL	8	60	497.79984610463316	993.5851392760663	2	497.8005065917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KSKVEYKL_	ENSG00000163785|ENST00000623711|RYK;nc|ENSG00000163785|P34925-2|RYK;RYK|p.N182Ifs*5|1|0.28|ENSG00000163785|chr3:134209739-134209739|T/-|frameshift_variant	40.77816245573522	0.6514838689002179	5				NaN	NaN	0	NaN	5887	3773	9655
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9676	28.946	NaN	13527	30	0	1673.6	0.214	+			41377	SVMGVTVSR	9	72	468.25235707826965	934.4901612233393	2	468.25225830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVMGVTVSR_	DIP2B|p.A1021Cfs*11|1|0.32|ENSG00000066084|chr12:50721279-50721280|-/CTGTATGCAC|frameshift_variant;DIP2B|p.I979Afs*17|1|0.13|ENSG00000066084|chr12:50718790-50718815|AAATAGAAGAGAATGATTTGGTGAGG/-|frameshift_variant;DIP2B|p.V1240Dfs*9|1|0.05|ENSG00000066084|chr12:50731445-50731446|-/ATATTTAC|frameshift_variant;DIP2B|p.V893Gfs*91|1|0.06|ENSG00000066084|chr12:50714417-50714418|-/G|frameshift_variant;ENSG00000066084|ENST00000301180|DIP2B	150.36159442982594	0.006784847064083231	5				NaN	NaN	0	NaN	5898	3776	9675
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9677	28.95	NaN	3673.9	30	0	671.43	0.106	+			5470	AVAAFQVEK	9	65	481.76873036701386	NaN	0	481.7685852050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVAAFQVEK_	ENSG00000185000|ENST00000528718|DGAT1;ENST00000525371.1_1_8:145542007-145542573:-|nuORF;ENST00000531896.5_1_8:145541583-145550314:-|nuORF	45.97224482568171	0.23445038899310136	5				NaN	NaN	0	NaN	5899	3776	9675
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9678	28.952	NaN	1625.5	30	0	375.99	0.106			+	41890	SVTSLTPR	8	50	430.74540706860415	859.4762612040083	2	430.745361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVTSLTPR_	REV__ENST00000548303.1_1_12:53819264-53819576:+|nuORF	47.91560031466742	0.6071945918984287	5				NaN	NaN	0	NaN	5900	3776	9675
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9679	28.953	NaN	2739.3	30	0	380	0.106	+			27605	MPNGTVQRF	9	60	525.2628051912202	1048.5110574492403	2	525.2636108398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MPNGTVQRF_	BPTF|p.D2844Afs*20|1|0.08|ENSG00000171634|chr17:67959766-67959767|-/C|frameshift_variant;BPTF|p.K2718Nfs*36|3|0.12|ENSG00000171634|chr17:67948150-67948150|A/-|frameshift_variant;ENSG00000171634|ENST00000306378|BPTF;ENST00000582406.1_1_17:65940388-65941531:+|nuORF;ENST00000584931.1_1_17:65936727-65940601:+|nuORF;nc|ENSG00000171634|Q12830-4|BPTF;nc|ENSG00000171634|Q12830|BPTF	46.45678178249821	0.34452392205506005	5				NaN	NaN	0	NaN	5901	3776	9675
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9680	28.955	NaN	2346.4	30	0	488.24	0.106	+			45851	VALKHNKD	8	51	462.76835084870595	NaN	0	462.7682800292969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VALKHNKD_	ENSG00000036549|ENST00000370801|ZZZ3;ENST00000476275.5_1_1:78046613-78098535:-|nuORF;nc|ENSG00000036549|Q8IYH5-2|ZZZ3;nc|ENSG00000036549|Q8IYH5-4|ZZZ3;ZZZ3|p.N537Ifs*57|1|0.16|ENSG00000036549|chr1:77584551-77584551|T/-|frameshift_variant	44.116797842482775	1.7418937515398478	5				NaN	NaN	0	NaN	5902	3776	9675
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9681	28.957	NaN	2228.5	30	0	180.82	0.035	+			47331	VPASLTTKY	9	63	490.2764030254351	978.5382531176703	2	490.27606201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VPASLTTKY_	ENSG00000118900|ENST00000262376|UBN1;ENSG00000157741|ENST00000473989|UBN2;nc|ENSG00000118900|Q9NPG3-2|UBN1;nc|ENSG00000157741|Q6ZU65-2|UBN2;UBN1|p.R716Gfs*129|1|0.3|ENSG00000118900|chr16:4874551-4874551|A/-|frameshift_variant;UBN2|p.G1191Efs*28|1|0.17|ENSG00000157741|chr7:139284473-139284473|G/-|frameshift_variant;UBN2|p.K314Rfs*11|1|0.15|ENSG00000157741|chr7:139261281-139261281|A/-|frameshift_variant;UBN2|p.K315Efs*5|1|0.25|ENSG00000157741|chr7:139261280-139261281|-/A|frameshift_variant;UBN2|p.K542Nfs*2|1|0.14|ENSG00000157741|chr7:139272347-139272347|A/-|frameshift_variant;UBN2|p.L543Tfs*6|1|0.38|ENSG00000157741|chr7:139272346-139272347|-/A|frameshift_variant;UBN2|p.S988Hfs*27|1|0.18|ENSG00000157741|chr7:139283862-139283862|C/-|frameshift_variant	51.19269402634007	0.2889735674168909	5				NaN	NaN	0	NaN	5903	3776	9675
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9682	28.958	NaN	1702.7	30	0	212.32	0.14			+	-1	SLFWVQMP	8	59	512.2506924065441	NaN	0	512.2506713867188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_SLFWVQM(Oxidation (M))P_	REV__ENSG00000061918|ENST00000264424|GUCY1B1;REV__nc|ENSG00000061918|Q02153-2|GUCY1B1;REV__nc|ENSG00000061918|Q02153-3|GUCY1B1	38.80614096846853	1.7418937515398478	5				NaN	NaN	0	NaN	5904	3776	9675
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9697	28.991	NaN	61738	30	0	20002	0.214	+			19057	IYGSSHSW	8	79	468.7141215392207	935.4136901452414	2	468.71368408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IYGSSHSW_	DUOX1|p.S186N|1|0.29|ENSG00000137857|chr15:45135535-45135535|G/A|missense_variant;ENSG00000137857|ENST00000389037|DUOX1;ENSG00000140279|ENST00000389039|DUOX2;nc|ENSG00000140279|Q9NRD8|DUOX2	128.81572412613596	0.2219515639268018	5				NaN	NaN	0	NaN	5916	3779	9696
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9698	28.995	NaN	8249.4	30	0	3370.1	0.106				-1	 	0	62	458.2422838580053	914.4700147828106	2	458.2423400878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5917	3779	9696
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9699	28.996	NaN	5617	30	0	1446.3	0.106	+			44821	TTSNFTFSK	9	71	516.7531877369273	1031.4918225406545	2	516.7535400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TTSNFTFSK_	ENSG00000160294|ENST00000291688|MCM3AP;MCM3AP|p.K492Efs*5|1|0.29|ENSG00000160294|chr21:46280545-46280546|-/C|frameshift_variant	106.68306549817024	0.032382560583716295	5				NaN	NaN	0	NaN	5918	3779	9696
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9700	28.998	NaN	2980.1	30	0	1120.3	0.106	+			30909	QEKVSDYEM	9	58	564.7471167842928	1127.4796806353854	2	564.747802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QEKVSDYEM_	ENSG00000132646|ENST00000379143|PCNA	85.16082228582465	0.07850854922700509	5				NaN	NaN	0	NaN	5919	3779	9696
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9701	29	NaN	2010.9	30	0	441.84	0.106	+			29233	NVYEVVNPK	9	65	531.2843608871639	1060.5541688411276	2	531.2852783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NVYEVVNPK_	ENSG00000139117|ENST00000331366|CPNE8	58.22992032128504	0.22837015374068087	5				NaN	NaN	0	NaN	5920	3779	9696
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9702	29.002	NaN	1327	30	0	125.61	0.036			+	23922	LDMLFIMKG	9	59	534.2862145177554	1066.5578761023107	2	534.2871704101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LDMLFIMKG_	REV__ENSG00000186871|ENST00000334463|ERCC6L	35.15202426646627	0.4747332964206883	5				NaN	NaN	0	NaN	5921	3779	9696
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9703	29.003	NaN	1771.9	30	0	249.39	0.146			+	47774	VSGYLLCA	8	47	413.2115478515625	NaN	0	413.2115478515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VSGYLLCA_	REV__tr|U7T0W6|U7T0W6_FUSNUMFStransporter,AGZAfamily,xanthine/uracilpermeaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00716PE=4SV=1	33.51558372728122	1.7418937515398478	5				NaN	NaN	0	NaN	5922	3779	9696
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9718	29.036	NaN	3749.6	30	0	670.45	0.214	+			23643	LARGEVGGTE	10	66	494.75768807194	987.50082321068	2	494.7582702636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LARGEVGGTE_	ENST00000264661.3_1_17:40332898-40333183:-|nuORF	42.396135135203025	0.5270658956260207	5				NaN	NaN	0	NaN	5934	3782	9717
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9719	29.039	NaN	3780	30	0	374.24	0.106	+			23113	KVVNLPFEK	9	74	537.3212571516041	1072.627961370008	2	537.3218994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVVNLPFEK_	ENST00000604687.1_1_21:10475839-10476034:-|nuORF	99.78786539795823	0.03941834715970116	5				NaN	NaN	0	NaN	5935	3782	9717
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9720	29.041	NaN	2617	30	0	390.93	0.106	+			23986	LDVSGPKV	8	54	407.73707815362735	813.4596033740547	2	407.7369689941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LDVSGPKV_	AHNAK|p.A4215V|1|0.31|ENSG00000124942|chr11:62521773-62521773|G/A|missense_variant;AHNAK|p.I4226V|1|0.1|ENSG00000124942|chr11:62521741-62521741|T/C|missense_variant;AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK;ENSG00000124942|ENST00000378024|AHNAK;ENSG00000124942|ENST00000378024|AHNAK;ENSG00000124942|ENST00000378024|AHNAK;ENSG00000124942|ENST00000378024|AHNAK	54.776311868738084	0.5534952410049249	5				NaN	NaN	0	NaN	5936	3782	9717
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9721	29.043	NaN	1356.4	30	0	302.91	0.106	+			24454	LGFFIMCVY	9	46	546.768841848774	1091.5231307643478	2	546.7691650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LGFFIMCVY_	ENSG00000136478|ENST00000584379|TEX2;nc|ENSG00000136478|Q8IWB9-2|TEX2;TEX2|p.L796Cfs*29|1|0.25|ENSG00000136478|chr17:64188206-64188206|G/-|frameshift_variant;TEX2|p.S903Vfs*17|1|0.22|ENSG00000136478|chr17:64160898-64160899|-/C|frameshift_variant	29.841539824830324	0.5243625958137083	5				NaN	NaN	0	NaN	5937	3782	9717
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9722	29.045	NaN	2765.7	30	0	394.46	0.106	+			43256	TEYETQVKV	9	59	548.7793484840496	1095.544144034899	2	548.7799682617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TEYETQVKV_	ENSG00000120948|ENST00000240185|TARDBP;nc|ENSG00000120948|Q13148-4|TARDBP	54.722347961057174	0.257609425301511	5				NaN	NaN	0	NaN	5938	3782	9717
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9723	29.047	NaN	939.72	30	0	57.516	0.033	+			46381	VELDHATL	8	44	449.23711268866765	896.4596724441353	2	449.23736572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VELDHATL_	ENSG00000106638|ENST00000305632|TBL2;ENST00000452475.5_1_7:72986280-72992879:-|nuORF;TBL2|p.P180Qfs*25|1|0.39|ENSG00000106638|chr7:73573379-73573379|G/-|frameshift_variant	47.91560031466742	0.6071945918984287	5				NaN	NaN	0	NaN	5939	3782	9717
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9724	29.047	NaN	1196.8	30	0	142.86	0.14				-1	MAEMARRL	8	56	497.25302600230236	992.4914990714047	2	497.25250244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_MAEM(Oxidation (M))ARRL_	ENSG00000154370|ENST00000284551|TRIM11;nc|ENSG00000154370|Q96F44-2|TRIM11;nc|ENSG00000154370|Q96F44-3|TRIM11	53.351449002276354	0.5676011784961348	5				NaN	NaN	0	NaN	5940	3782	9717
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9735	29.074	NaN	10413	30	0	839.28	0.214			+	4050	ATDGPLRNL	9	86	478.76149593424276	955.5084389352855	2	478.7613525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATDGPLRNL_	REV__ENST00000585822.1_1_18:37421397-37421817:-|nuORF	68.78682469695295	0.14603441672067394	5				NaN	NaN	0	NaN	5948	3785	9734
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9736	29.078	NaN	1881.3	30	0	308.33	0.106	+			42043	SWLPNLDG	8	59	451.2241746674434	900.4337964016868	2	451.2240905761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SWLPNLDG_	ENSG00000187730|ENST00000378585|GABRD;GABRD|p.I415Hfs*14|1|0.24|ENSG00000187730|chr1:2030158-2030159|-/G|frameshift_variant	51.33545320467046	0.5859736979383976	5				NaN	NaN	0	NaN	5949	3785	9734
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9737	29.08	NaN	1982.8	30	0	173.34	0.106	+			42903	TEHINIHQL	9	63	552.7929277040269	1103.5713024748536	2	552.7933959960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TEHINIHQL_	ENSG00000180353|ENST00000314583|HCLS1;ENST00000481314.5_1_3:121363541-121379717:-|nuORF;ENST00000487290.5_1_3:121363549-121379717:-|nuORF;nc|ENSG00000180353|P14317-2|HCLS1	64.20726635412375	0.17854274437659667	5				NaN	NaN	0	NaN	5950	3785	9734
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9738	29.082	NaN	1708	30	0	314.88	0.035	+			7549	DHGLYQML	8	53	488.7320094603734	NaN	0	488.732421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DHGLYQML_	ADCK1|p.Q416Pfs*27|1|0.38|ENSG00000063761|chr14:77931552-77931553|-/C|frameshift_variant;ENSG00000063761|ENST00000238561|ADCK1;nc|ENSG00000063761|Q86TW2-3|ADCK1;nc|ENSG00000063761|Q86TW2|ADCK1	42.47446043378293	1.7418937515398478	5				NaN	NaN	0	NaN	5951	3785	9734
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9746	29.1	NaN	8717.4	30	0	725.68	0.214	+			35961	SEGRTFEM	8	83	478.71051187074426	955.4064708082885	2	478.71044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEGRTFEM_	ENSG00000136068|ENST00000295956|FLNB;ENST00000481470.5_1_3:58118395-58154450:+|nuORF;nc|ENSG00000136068|O75369-2|FLNB;nc|ENSG00000136068|O75369-3|FLNB;nc|ENSG00000136068|O75369-4|FLNB;nc|ENSG00000136068|O75369-5|FLNB;nc|ENSG00000136068|O75369-6|FLNB;nc|ENSG00000136068|O75369-7|FLNB;nc|ENSG00000136068|O75369-8|FLNB;nc|ENSG00000136068|O75369-9|FLNB	79.71258880314673	0.32596852995588826	5				NaN	NaN	0	NaN	5956	3788	9745
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9747	29.104	NaN	24440	30	0	10779	0.106	+			49666	VYISEHEHF	9	76	387.51725226419774	1159.5299273927933	3	387.5172119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYISEHEHF_	ENSG00000104853|ENST00000337392|CLPTM1;nc|ENSG00000104853|O96005-3|CLPTM1;nc|ENSG00000104853|O96005-4|CLPTM1	66.42927471994793	0.16001998865088202	5				NaN	NaN	0	NaN	5957	3788	9745
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9748	29.105	NaN	5363.7	30	0	1215.2	0.034	+			1926	AISDVIGNK	9	61	458.7584655796643	915.5023782261286	2	458.7584533691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AISDVIGNK_	ENSG00000089902|ENST00000262241|RCOR1	68.78682469695295	0.14603441672067394	5				NaN	NaN	0	NaN	5958	3788	9745
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9757	29.126	NaN	3479.3	30	0	635.91	0.214	+			51379	YTLDQTYAK	9	68	551.7743982679732	1101.5342436027463	2	551.7750854492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YTLDQTYAK_	ENSG00000198804|ENST00000361624|MT-CO1;ENST00000441633.2_1_X:125606231-125606297:+|nuORF	56.43379154798735	0.2433427591689151	5				NaN	NaN	0	NaN	5964	3791	9756
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9758	29.129	NaN	3475.3	30	0	397.22	0.106	+			36184	SELITKAV	8	56	430.7579689233728	859.5013849135456	2	430.7576904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SELITKAV_	ENSG00000124575|ENST00000244534|H1-3;ENSG00000168298|ENST00000304218|H1-4;ENSG00000184357|ENST00000331442|H1-5;ENSG00000187837|ENST00000343677|H1-2	71.87747018426188	0.391254423828572	5				NaN	NaN	0	NaN	5965	3791	9756
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9759	29.131	NaN	3655.9	30	0	1681.8	0.106			+	-1	VAAIMLGRC	9	65	495.76596827569205	989.5173836181841	2	495.7660827636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_VAAIMLGRC(Carbamidomethyl (C))_	REV__ENSG00000134873|ENST00000299339|CLDN10;REV__nc|ENSG00000134873|P78369-2|CLDN10;REV__nc|ENSG00000134873|P78369-3|CLDN10	44.53106598305862	0.36711179743858174	5				NaN	NaN	0	NaN	5966	3791	9756
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9760	29.133	NaN	3696	30	0	1416.8	0.106	+			32399	QVDPNFYSK	9	71	549.2667562511702	1096.5189595691404	2	549.2670288085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QVDPNFYSK_	ENSG00000176623|ENST00000406452|RMDN1;nc|ENSG00000176623|Q96DB5-2|RMDN1	29.170058357718403	0.5306379469863586	5				NaN	NaN	0	NaN	5967	3791	9756
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9761	29.135	NaN	872.23	30	0	560.38	0.03	+			22273	KTAVNVLLK	9	23	329.2193108967434	NaN	0	329.2196044921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KTAVNVLLK_	ENSG00000068784|ENST00000263736|SRBD1;nc|ENSG00000068784|Q8N5C6-2|SRBD1	11.511019455917149	0.3980220838287494	5				NaN	NaN	0	NaN	5968	3791	9756
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9769	29.153	NaN	4725	30	0	1461.6	0.215	+			3310	ASLTAALAK	9	59	423.25811088609646	844.5016688389929	2	423.25799560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASLTAALAK_	ENSG00000197892|ENST00000524189|KIF13B;nc|ENSG00000197892|Q9NQT8-2|KIF13B	93.1432384553994	0.056003526918089595	5				NaN	NaN	0	NaN	5973	3794	9768
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9770	29.156	NaN	2941.9	30	0	343.98	0.106				-1	 	0	61	456.7137687876211	911.4129846420423	2	456.71405029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5974	3794	9768
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9771	29.158	NaN	5181.8	30	0	680.17	0.106	+			7457	DFQVGVTVL	9	60	489.2690113607443	976.5234697882886	2	489.2684631347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DFQVGVTVL_	ENST00000325076.9_1_20:34190424-34191756:-|nuORF	42.86426827375447	0.38666266728046506	5				NaN	NaN	0	NaN	5975	3794	9768
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9772	29.16	NaN	3041.7	30	0	625.7	0.106			+	8729	EEEQIREE	8	61	531.2425698987882	1060.4705868643764	2	531.23828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EEEQIREE_	REV__ENSG00000084090|ENST00000337288|STARD7;REV__STARD7|p.N240Tfs*3|1|0.15|ENSG00000084090|chr2:96193102-96193102|T/-|frameshift_variant	60.11826168202944	0.5006107059937851	5				NaN	NaN	0	NaN	5976	3794	9768
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9773	29.162	NaN	1961.3	30	0	151.06	0.106				-1	 	0	44	449.70598364692677	897.3974143606536	2	449.70599365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5977	3794	9768
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9774	29.164	NaN	1548.2	30	0	269	0.106	+			7185	DAHALIYK	8	56	465.7575928179473	NaN	0	465.75738525390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DAHALIYK_	ENSG00000154719|ENST00000352957|MRPL39;nc|ENSG00000154719|Q9NYK5-2|MRPL39	60.29395666154354	1.7418937515398478	5				NaN	NaN	0	NaN	5978	3794	9768
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9775	29.166	NaN	1325.6	30	0	223.02	0.034			+	23495	LAGGGVARSR	10	53	472.27682720956983	942.5391014859397	2	472.2762451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LAGGGVARSR_	REV__ENST00000526995.5_1_11:36531604-36531790:-|nuORF	56.72105179125745	0.3956618550748046	5				NaN	NaN	0	NaN	5979	3794	9768
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9787	29.191	NaN	11475	30	0	1797.6	0.214	+			7129	DAARLQAAY	9	68	489.7536445886325	977.492736244065	2	489.7535705566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DAARLQAAY_	ENSG00000115306|ENST00000356805|SPTBN1;ENST00000496323.1_1_2:54880712-54887220:+|nuORF;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1	82.7504851949679	0.08565546331141553	5				NaN	NaN	0	NaN	5988	3797	9786
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9788	29.195	NaN	5441.4	30	0	495.42	0.106	+			17683	IEKQPPQVL	9	65	526.3107094107736	1050.606865888347	2	526.3111572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IEKQPPQVL_	ENSG00000126561|ENST00000590949|STAT5A;ENSG00000173757|ENST00000293328|STAT5B;ENST00000468312.1_1_17:40370167-40384145:-|nuORF;nc|ENSG00000126561|P42229-2|STAT5A;STAT5B|p.H584Tfs*8|3|0.33|ENSG00000173757|chr17:42210428-42210429|-/T|frameshift_variant;STAT5B|p.K583Nfs*16|2|0.34|ENSG00000173757|chr17:42210429-42210429|T/-|frameshift_variant	75.04331003522576	0.118981335847003	5				NaN	NaN	0	NaN	5989	3797	9786
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9789	29.197	NaN	2375.9	30	0	409.99	0.106	+			41658	SVRAPPNRT	9	57	499.2819744995847	996.5493960659694	2	499.2817687988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVRAPPNRT_	ENSG00000124225|ENST00000341744|PMEPA1;ENSG00000168675|ENST00000359446|LDLRAD4;ENST00000435606.1_1_18:13621108-13645653:+|nuORF;nc|ENSG00000124225|Q969W9-2|PMEPA1;nc|ENSG00000124225|Q969W9-3|PMEPA1;nc|ENSG00000168675|O15165-2|LDLRAD4;nc|ENSG00000168675|O15165-3|LDLRAD4;nc|ENSG00000168675|O15165-4|LDLRAD4;nc|ENSG00000168675|O15165-5|LDLRAD4;nc|ENSG00000168675|O15165-6|LDLRAD4;nc|ENSG00000168675|O15165-7|LDLRAD4;nc|ENSG00000168675|O15165-8|LDLRAD4	53.08895987439943	0.27122541748218487	5				NaN	NaN	0	NaN	5990	3797	9786
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9790	29.198	NaN	3282.1	30	0	582.79	0.106	+			15446	GTYVGLTCK	9	63	471.2415218404495	940.468490747699	2	471.2410888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTYVGLTCK_	ENSG00000221926|ENST00000649191|TRIM16;nc|ENSG00000221926|O95361-2|TRIM16;nc|ENSG00000291110|Q309B1|TRIM16L	61.691277971877994	0.19951612995419254	5				NaN	NaN	0	NaN	5991	3797	9786
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9791	29.2	NaN	1269.7	30	0	120.11	0.106	+			29940	PMNSSGVHRKS	11	62	600.2989656854605	1198.583378437721	2	600.2993774414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PMNSSGVHRKS_	ENST00000272433.6_1_2:73228703-73285715:-|nuORF;ENST00000442582.1_2_2:73227612-73268044:-|nuORF;ENST00000461352.5_1_2:73195640-73285715:-|nuORF	28.081489160057373	0.6952392775027776	5				NaN	NaN	0	NaN	5992	3797	9786
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9792	29.202	NaN	1793.2	30	0	367.08	0.033			+	8393	EANGTIRL	8	42	437.242958392021	872.4713638508421	2	437.242919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EANGTIRL_	REV__PKP1|p.R340I|1|0.3|ENSG00000081277|chr1:201317744-201317744|G/T|missense_variant	73.97473282117947	0.3737790450121076	5				NaN	NaN	0	NaN	5993	3797	9786
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9807	29.234	NaN	6295.1	30	0	1579	0.214	+			48218	VTATQLIQK	9	70	501.302764772196	1000.590976611192	2	501.3030700683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTATQLIQK_	ENSG00000198589|ENST00000651943|LRBA;LRBA|p.L2590*|1|0.41|ENSG00000198589|chr4:150310342-150310342|A/-|frameshift_variant;LRBA|p.T2011Qfs*11|1|0.19|ENSG00000198589|chr4:150599022-150599022|T/-|frameshift_variant;nc|ENSG00000198589|P50851-2|LRBA;nc|ENSG00000198589|P50851|LRBA	120.8684288430529	0.02067403653475984	5				NaN	NaN	0	NaN	6005	3800	9806
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9808	29.237	NaN	8083.7	30	0	3226.1	0.106	+			30987	QERLATAL	8	62	451.2585742533455	900.502595573491	2	451.2585144042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QERLATAL_	CON__Q3SX28;ENSG00000140416|ENST00000403994|TPM1;ENSG00000143549|ENST00000651641|TPM3;ENSG00000167460|ENST00000643579|TPM4;ENSG00000198467|ENST00000645482|TPM2;ENST00000391998.3_1_19:53982744-53982942:+|nuORF;ENST00000471212.5_1_9:35684790-35689844:-|nuORF;ENST00000473036.2_1_1:154145382-154155604:-|nuORF;ENST00000520239.1_1_8:70041855-70042335:+|nuORF;ENST00000558400.1_1_15:63349204-63351954:+|nuORF;ENST00000558868.5_1_15:63340774-63353139:+|nuORF;ENST00000560975.5_1_15:63335715-63353895:+|nuORF;ENST00000587201.5_1_19:16187360-16198908:+|nuORF;nc|ENSG00000140416|P09493-10|TPM1;nc|ENSG00000140416|P09493-2|TPM1;nc|ENSG00000140416|P09493-3|TPM1;nc|ENSG00000140416|P09493-4|TPM1;nc|ENSG00000140416|P09493-5|TPM1;nc|ENSG00000140416|P09493-6|TPM1;nc|ENSG00000140416|P09493-7|TPM1;nc|ENSG00000140416|P09493-8|TPM1;nc|ENSG00000140416|P09493-9|TPM1;nc|ENSG00000143549|P06753-2|TPM3;nc|ENSG00000143549|P06753-3|TPM3;nc|ENSG00000143549|P06753-4|TPM3;nc|ENSG00000143549|P06753-5|TPM3;nc|ENSG00000143549|P06753-6|TPM3;nc|ENSG00000167460|P67936-2|TPM4;nc|ENSG00000198467|P07951-2|TPM2;nc|ENSG00000198467|P07951-3|TPM2	87.75429964447693	0.2842685068779738	5				NaN	NaN	0	NaN	6006	3800	9806
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9809	29.239	NaN	2134.9	30	0	710.07	0.106				-1	KMKLMRSEG	9	56	548.2870630998214	1094.5595732664426	2	548.2880249023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_KMKLM(Oxidation (M))RSEG_	nc|ENSG00000196233|Q96JN0|LCOR	37.15910966729921	0.4535818937225704	5				NaN	NaN	0	NaN	6007	3800	9806
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9810	29.241	NaN	1684.8	30	0	176.83	0.106	+			49647	VYIKHPVSL	9	60	528.3155926525279	1054.6166323718558	2	528.3161010742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VYIKHPVSL_	ENSG00000099341|ENST00000215071|PSMD8;ENST00000592001.5_1_19:38865430-38871817:+|nuORF	42.396135135203025	0.392153681582562	5				NaN	NaN	0	NaN	6008	3800	9806
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9811	29.243	NaN	2952.2	30	0	300.64	0.106	+			35760	SDVPSSAHAG	10	57	464.212160473313	926.4097680134261	2	464.2122802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SDVPSSAHAG_	ENSG00000179715|ENST00000546455|PCED1B	37.15910966729921	0.575322462179216	5				NaN	NaN	0	NaN	6009	3800	9806
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9812	29.244	NaN	1257.3	30	0	167.42	0.035			+	42204	TAAGAECHYP	10	54	510.2178799903647	NaN	0	510.2179870605469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TAAGAECHYP_	REV__ENSG00000073169|ENST00000380903|SELENOO;REV__ENST00000380903.6_1_22:50639465-50655786:+|nuORF;REV__ENST00000492092.1_1_22:50644878-50655786:+|nuORF	51.33545320467046	0.297159550775418	5				NaN	NaN	0	NaN	6010	3800	9806
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9813	29.245	NaN	929.57	30	0	233.36	0.142			+	43097	TEPMPQEEW	9	48	573.7443237304688	NaN	0	573.7443237304688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TEPMPQEEW_	REV__ENSG00000162894|ENST00000367091|FCMR;REV__nc|ENSG00000162894|O60667-2|FCMR;REV__nc|ENSG00000162894|O60667-3|FCMR	27.882242232435846	0.3367954786602879	5				NaN	NaN	0	NaN	6011	3800	9806
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9829	29.28	NaN	17825	30	0	5564.1	0.214	+			40672	SVASISLTK	9	66	453.2684359388173	904.5223189444346	2	453.2684020996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVASISLTK_	ENST00000298289.6_1_14:50085755-50087389:-|nuORF	134.7655990226056	0.012935733000282069	5				NaN	NaN	0	NaN	6024	3803	9828
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9830	29.283	NaN	16278	30	0	2723.9	0.106	+			3827	ATAIGMPVEK	10	77	508.7757766433975	1015.537000353595	2	508.77587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATAIGMPVEK_	ENSG00000109736|ENST00000355443|MFSD10;ENST00000509676.1_1_4:2934766-2935650:-|nuORF;MFSD10|p.S111Gfs*48|1|0.44|ENSG00000109736|chr4:2933125-2933147|GGGCGCCTCCCCAAGCAGTCAGA/-|frameshift_variant	109.43880257439609	0.049666173740610824	5				NaN	NaN	0	NaN	6025	3803	9828
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9831	29.285	NaN	2736.3	30	0	350.24	0.106	+			11689	FRGMFAGGL	9	65	478.24560624873266	954.4766595642653	2	478.2453918457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FRGMFAGGL_	ENSG00000099910|ENST00000328879|KLHL22	50.0245360154114	0.3026755932229825	5				NaN	NaN	0	NaN	6026	3803	9828
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9832	29.287	NaN	2558.9	30	0	321.27	0.106	+			23980	LDVMDRGLI	9	64	524.2783052823552	1046.5420576315103	2	524.2796630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_LDVM(Oxidation (M))DRGLI_	ENSG00000117595|ENST00000367021|IRF6;nc|ENSG00000117595|O14896-2|IRF6	82.24051045832904	0.08786059719216216	5				NaN	NaN	0	NaN	6027	3803	9828
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9833	29.289	NaN	1585	30	0	823.53	0.106			+	2371	ANEQKVTEMK	10	38	589.2972739488092	1176.5799949644183	2	589.298095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ANEQKVTEMK_	REV__NIN|p.T1558M|1|0.3|ENSG00000100503|chr14:50754624-50754624|G/A|missense_variant	28.081489160057373	0.6505064946289502	5				NaN	NaN	0	NaN	6028	3803	9828
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9834	29.291	NaN	1390.6	30	0	199.93	0.033	+			47758	VSGPTLLAK	9	49	443.2739271645378	884.5333013958756	2	443.273681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VSGPTLLAK_	ENSG00000126790|ENST00000247194|L3HYPDH;ENST00000527981.1_1_14:59950407-59951094:-|nuORF	36.446750945000026	0.4619375763483977	5				NaN	NaN	0	NaN	6029	3803	9828
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9848	29.32	NaN	58625	30	0	5860	0.214	+			1624	AGMALGIQK	9	97	444.7519916711141	887.4894304090283	2	444.7518310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AGMALGIQK_	ENSG00000174851|ENST00000376901|YIF1A	148.20599733432147	0.007287282186870133	5				NaN	NaN	0	NaN	6040	3806	9847
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9849	29.324	NaN	2640.4	30	0	360.8	0.106	+			47511	VQNASLIL	8	47	429.2580198505036	856.5014867678073	2	429.2579650878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VQNASLIL_	ENSG00000102100|ENST00000247138|SLC35A2;nc|ENSG00000102100|P78381-2|SLC35A2;nc|ENSG00000102100|P78381-3|SLC35A2;nc|ENSG00000102100|P78381-4|SLC35A2;SLC35A2|p.R55H|1|0.15|ENSG00000102100|chrX:48909924-48909924|C/T|missense_variant	76.7741389293348	0.3504530765139327	5				NaN	NaN	0	NaN	6041	3806	9847
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9850	29.326	NaN	1946.5	30	0	627	0.106	+			26639	LVCTECVLL	9	51	496.7624919239896	991.5104309147792	2	496.7613830566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LVCTECVLL_	ENSG00000178586|ENST00000641019|OR6B3;ENSG00000182083|ENST00000319423|OR6B2	57.81127852772723	0.2318599694398087	5				NaN	NaN	0	NaN	6042	3806	9847
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9851	29.328	NaN	2790.4	30	0	383.67	0.106	+			13494	GLLSVGLPGL	10	56	463.28914773930154	NaN	0	463.2891845703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GLLSVGLPGL_	ENST00000257435.11_1_5:111091482-111092910:-|nuORF;ENST00000379671.7_1_5:111091479-111093265:-|nuORF;ENST00000455559.6_1_5:111091479-111093657:-|nuORF;ENST00000508161.5_1_5:111091482-111093647:-|nuORF	45.9519527083369	0.331194823726099	5				NaN	NaN	0	NaN	6043	3806	9847
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9852	29.329	NaN	1721.7	30	0	506.39	0.106	+			49899	VYTTMAEHF	9	60	557.7467758398045	1113.478998746409	2	557.7474975585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_VYTTM(Oxidation (M))AEHF_	ENSG00000117472|ENST00000372003|TSPAN1;TSPAN1|p.T119M|1|0.33|ENSG00000117472|chr1:46184801-46184801|C/T|missense_variant	45.9519527083369	0.35044536499095585	5				NaN	NaN	0	NaN	6044	3806	9847
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9853	29.331	NaN	2403.5	30	0	197.43	0.034	+			10991	FEGKDMAAV	9	64	484.2309723168394	966.4473917004789	2	484.23095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FEGKDMAAV_	ENSG00000149591|ENST00000392951|TAGLN;ENST00000533863.1_2_11:117074025-117074655:+|nuORF	37.81151784470057	0.4459294069877048	5				NaN	NaN	0	NaN	6045	3806	9847
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9867	29.361	NaN	3519.4	30	0	799.28	0.214	+			19058	IYGSSHSW	8	53	468.7141215392207	935.4136901452414	2	468.71380615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IYGSSHSW_	DUOX1|p.S186N|1|0.29|ENSG00000137857|chr15:45135535-45135535|G/A|missense_variant;ENSG00000137857|ENST00000389037|DUOX1;ENSG00000140279|ENST00000389039|DUOX2;nc|ENSG00000140279|Q9NRD8|DUOX2	33.51558372728122	0.7005509609380386	5				NaN	NaN	0	NaN	6056	3809	9866
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9868	29.364	NaN	2055.8	30	0	411.42	0.106	+			7850	DQSRENSI	8	49	474.7241726203229	NaN	0	474.7242431640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DQSRENSI_	ENSG00000268988|ENST00000598475|SPANXN2	37.81151784470057	1.7418937515398478	5				NaN	NaN	0	NaN	6057	3809	9866
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9869	29.366	NaN	2297.1	30	0	283.03	0.106	+			14922	GTMAMTVVTK	10	55	519.769092715732	1037.5236324982639	2	519.7698364257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTMAMTVVTK_	ENSG00000175115|ENST00000320580|PACS1;nc|ENSG00000175115|Q6VY07-2|PACS1	70.39856735676683	0.27406383984062843	5				NaN	NaN	0	NaN	6058	3809	9866
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9870	29.368	NaN	1362.7	30	0	66.414	0.106			+	24047	LEGLQLSL	8	54	436.75830263014905	NaN	0	436.7577209472656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LEGLQLSL_	REV__ENSG00000180815|ENST00000338883|MAP3K15;REV__ENST00000470101.1_1_X:19378869-19390989:-|nuORF;REV__ENST00000518578.5_1_X:19378869-19431499:-|nuORF;REV__nc|ENSG00000180815|Q6ZN16-2|MAP3K15;REV__nc|ENSG00000180815|Q6ZN16-3|MAP3K15	96.19043198914106	1.7418937515398478	5				NaN	NaN	0	NaN	6059	3809	9866
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9871	29.37	NaN	1481.8	30	0	336.43	0.106	+			30126	PRRGRDPG	8	49	455.75241285906657	909.4902727849332	2	455.7524719238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PRRGRDPG_	ENST00000418273.2_1_10:88730536-88730896:-|nuORF	24.20275056022122	0.7724576178584145	5				NaN	NaN	0	NaN	6060	3809	9866
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9872	29.372	NaN	1774.9	30	0	173.58	0.034	+			25120	LLQDSGGRL	9	61	479.7683535135878	957.5221540939756	2	479.76861572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LLQDSGGRL_	ENSG00000253767|ENST00000398604|PCDHGA8;nc|ENSG00000253767|Q9Y5G5-2|PCDHGA8;PCDHGA8|p.N788Kfs*2|1|0.27|ENSG00000253767|chr5:141395171-141395172|-/A|frameshift_variant	60.11826168202944	0.21262886028301267	5				NaN	NaN	0	NaN	6061	3809	9866
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9873	29.372	NaN	5059	30	0	1929	0.143			+	38572	SSFLKRKE	8	34	332.1941345166499	993.5605741501497	3	332.1941833496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSFLKRKE_	REV__MAP9|p.K567Rfs*13|5|0.22|ENSG00000164114|chr4:155352717-155352717|T/-|frameshift_variant	20.481830146152948	0.8005983782650069	5				NaN	NaN	0	NaN	6062	3809	9866
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9885	29.4	NaN	1307.2	30	0	109.21	0.214	+			28145	NALAVSTKY	9	61	483.7657823342742	NaN	0	483.7656555175781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NALAVSTKY_	CLUH|p.D1252Tfs*5|1|0.42|ENSG00000132361|chr17:2690771-2690771|T/-|frameshift_variant;ENSG00000132361|ENST00000651024|CLUH;ENST00000572014.1_1_17:2595653-2597426:-|nuORF;ENST00000574210.5_1_17:2594901-2597328:-|nuORF;nc|ENSG00000132361|O75153|CLUH	60.11826168202944	0.14881452885248947	5				NaN	NaN	0	NaN	6071	3812	9884
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9886	29.403	NaN	1162.3	30	0	74.555	0.106			+	9687	ELYELGPVL	9	61	516.7821655273438	NaN	0	516.7821655273438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ELYELGPVL_	REV__ENSG00000119227|ENST00000412723|PIGZ;REV__PIGZ|p.T490Lfs*10|1|0.26|ENSG00000119227|chr3:196947430-196947430|C/-|frameshift_variant	45.9519527083369	0.2345902329052062	5				NaN	NaN	0	NaN	6072	3812	9884
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9887	29.405	NaN	1935.9	30	0	102.83	0.106				-1	IPVTGQSSML	10	66	524.7713012695312	NaN	0	524.7713012695312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_IPVTGQSSM(Oxidation (M))L_	ENSG00000172059|ENST00000305883|KLF11;nc|ENSG00000172059|O14901-2|KLF11	37.81151784470057	0.3760215235790741	5				NaN	NaN	0	NaN	6073	3812	9884
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9888	29.407	NaN	1069.6	30	0	575.03	0.106			+	11684	FRDKNIAI	8	24	326.190736084944	975.550378855032	3	326.19097900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FRDKNIAI_	REV__tr|U7STJ4|U7STJ4_FUSNUElectrontransferflavoproteinalphasubunitOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01367PE=3SV=1	25.450171626174864	0.7628259754767981	5				NaN	NaN	0	NaN	6074	3812	9884
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9889	29.409	NaN	1105.9	30	0	141.68	0.106	+			37950	SPERSYVF	8	51	492.7425392967758	983.4705256603517	2	492.74261474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SPERSYVF_	ENSG00000156194|ENST00000286719|PPEF2;nc|ENSG00000156194|O14830-2|PPEF2	38.80614096846853	0.6637206697844082	5				NaN	NaN	0	NaN	6075	3812	9884
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9890	29.411	NaN	977.76	30	0	76.37	0.035	+			34823	RYLISTGST	9	51	499.2689313885856	996.5233098439712	2	499.2691650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RYLISTGST_	ENSG00000151388|ENST00000504830|ADAMTS12;nc|ENSG00000151388|P58397-3|ADAMTS12	36.446750945000026	0.4619375763483977	5				NaN	NaN	0	NaN	6076	3812	9884
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9902	29.436	NaN	4187.2	30	0	875.12	0.213	+			50816	YERSNEYQL	9	63	601.2778339839125	1200.541115034625	2	601.2783813476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YERSNEYQL_	ENSG00000087460|ENST00000371085|GNAS;ENST00000313949.11_1_20:57415898-57485881:+|nuORF;ENST00000371075.7_3_20:57415898-57485881:+|nuORF;ENST00000476196.5_1_20:57478538-57485881:+|nuORF;ENST00000477931.5_1_20:57464155-57485881:+|nuORF;ENST00000480975.5_1_20:57464272-57485881:+|nuORF;ENST00000487981.5_1_20:57478601-57484479:+|nuORF;ENST00000494081.5_1_20:57478601-57480533:+|nuORF;ENST00000496934.5_1_20:57473969-57485881:+|nuORF;nc|ENSG00000087460|P63092-2|GNAS;nc|ENSG00000087460|P63092-3|GNAS;nc|ENSG00000087460|P63092-4|GNAS;nc|ENSG00000087460|Q5JWF2-2|GNAS;nc|ENSG00000087460|Q5JWF2|GNAS	75.04331003522576	0.118981335847003	5				NaN	NaN	0	NaN	6085	3815	9901
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9903	29.44	NaN	1494.4	30	0	646.31	0.106			+	25107	LLPPKLPTK	9	21	336.22751478463306	NaN	0	336.2274475097656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LLPPKLPTK_	REV__SPEN|p.N2053Tfs*11|1|0.43|ENSG00000065526|chr1:15932394-15932394|A/-|frameshift_variant	12.811709888998246	0.3936198799427492	5				NaN	NaN	0	NaN	6086	3815	9901
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9904	29.442	NaN	1832.1	30	0	288.28	0.106	+			40673	SVASISLTK	9	50	453.2684359388173	904.5223189444346	2	453.2684326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVASISLTK_	ENST00000298289.6_1_14:50085755-50087389:-|nuORF	39.252832667884924	0.4290233611298554	5				NaN	NaN	0	NaN	6087	3815	9901
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9905	29.443	NaN	1661.3	30	0	181.71	0.106				-1	GDFFVGCIF	9	53	531.2425698987882	1060.4705868643764	2	531.2448120117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_GDFFVGC(Carbamidomethyl (C))IF_	ENSG00000167695|ENST00000308278|TLCD3A;ENST00000570699.1_1_17:636236-644807:+|nuORF	44.53106598305862	0.36711179743858174	5				NaN	NaN	0	NaN	6088	3815	9901
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9906	29.445	NaN	1768.7	30	0	129.98	0.106			+	-1	CRGELRAGP	9	55	508.2588806152344	NaN	0	508.2588806152344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_C(Carbamidomethyl (C))RGELRAGP_	REV__ENSG00000174939|ENST00000308748|ASPHD1	30.503639358989545	0.3235605894931338	5				NaN	NaN	0	NaN	6089	3815	9901
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9907	29.447	NaN	1433.3	30	0	99.38	0.032	+			46119	VDIAPTKA	8	47	407.73741345790324	813.4602739826065	2	407.7372741699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VDIAPTKA_	PPP1R10|p.H751Kfs*162|1|0.37|ENSG00000204569|chr6:30602386-30602398|CGTGAGGACGATG/-|frameshift_variant	71.29570347882199	0.39610197767395533	5				NaN	NaN	0	NaN	6090	3815	9901
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9908	29.448	NaN	3072.1	30	0	1005.2	0.142	+			10617	EYNINDKKI	9	58	568.8007023169203	1135.5868517006404	2	568.8023071289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EYNINDKKI_	tr|U7ST45|U7ST45_FUSNUOrganicsolventtolerance-likeN-terminaldomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01283PE=4SV=1	79.71258880314673	0.09879134589249085	5				NaN	NaN	0	NaN	6091	3815	9901
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9924	29.483	NaN	9946	30	0	837.02	0.214			+	7051	CSYSGKSKWD	10	81	580.756937016617	1159.499321100034	2	580.757568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CSYSGKSKWD_	REV__CON__Q1RMN8	54.776311868738084	0.41334902933431344	5				NaN	NaN	0	NaN	6104	3818	9923
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9925	29.486	NaN	3979	30	0	1632.9	0.106			+	32130	QSLKDCISK	9	62	511.27084171952134	1020.5271305058427	2	511.2711486816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QSLKDCISK_	REV__tr|U7SWH6|U7SWH6_FUSNUDUF4130domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01046PE=4SV=1	68.84614121027924	0.14577793175421136	5				NaN	NaN	0	NaN	6105	3818	9923
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9926	29.488	NaN	7793.2	30	0	1689.8	0.106	+			4951	ATQSFSTFR	9	70	522.75903535098	1043.5035177687598	2	522.7589721679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATQSFSTFR_	ENSG00000044090|ENST00000265348|CUL7;nc|ENSG00000044090|Q14999-2|CUL7	112.10723106719422	0.02684780151337622	5				NaN	NaN	0	NaN	6106	3818	9923
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9927	29.49	NaN	1867.8	30	0	191.08	0.106	+			476	AAVSTHVAL	9	46	434.7479474949507	867.4813420567015	2	434.7477111816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AAVSTHVAL_	ENSG00000163501|ENST00000295731|IHH;IHH|p.E379Rfs*18|2|0.25|ENSG00000163501|chr2:219055308-219055308|C/-|frameshift_variant;IHH|p.Q386Sfs*11|1|0.4|ENSG00000163501|chr2:219055287-219055287|G/-|frameshift_variant	73.97473282117947	0.12360187025703594	5				NaN	NaN	0	NaN	6107	3818	9923
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9928	29.492	NaN	2714.1	30	0	741.06	0.106	+			36877	SIGEVTTPK	9	60	466.2583654221383	NaN	0	466.2581787109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SIGEVTTPK_	ENST00000411573.6_1_17:45977579-45977684:-|nuORF	56.72105179125745	0.16330365735109603	5				NaN	NaN	0	NaN	6108	3818	9923
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9929	29.494	NaN	16750	30	0	6909.5	0.037	+			14850	GTLMWHQMK	9	52	377.8526311565739	1130.5360640699218	3	377.8525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTLMWHQMK_	ENST00000346169.6_1_3:184032401-184033585:+|nuORF;ENST00000352767.7_2_3:184032446-184033585:+|nuORF	31.954861631926434	0.5046124803899898	5				NaN	NaN	0	NaN	6109	3818	9923
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9930	29.494	NaN	1743.2	30	0	153.21	0.141			+	20392	KETEGIHFY	9	72	562.274061141851	1122.533569350502	2	562.274169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KETEGIHFY_	REV__ENSG00000158604|ENST00000457408|TMED4;REV__ENSG00000184840|ENST00000332598|TMED9;REV__ENST00000477639.5_1_7:44621634-44621805:-|nuORF;REV__ENST00000505521.1_1_5:177019227-177019656:+|nuORF;REV__ENST00000507723.1_1_5:177019275-177020791:+|nuORF;REV__nc|ENSG00000158604|Q7Z7H5-2|TMED4;REV__nc|ENSG00000158604|Q7Z7H5-3|TMED4	42.396135135203025	0.392153681582562	5				NaN	NaN	0	NaN	6110	3818	9923
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9943	29.524	NaN	4739.9	30	0	657.5	0.214	+			19140	IYNGKVTSI	9	58	497.7804403411331	993.5463277490662	2	497.78173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IYNGKVTSI_	ENSG00000067596|ENST00000262415|DHX8;ENST00000587044.1_1_17:41568567-41594747:+|nuORF	63.53385203322761	0.18415635464017938	5				NaN	NaN	0	NaN	6120	3821	9942
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9944	29.527	NaN	6687.2	30	0	777.72	0.106			+	29790	PIQIQSQNP	9	56	512.7748356070438	1023.5351182808876	2	512.77490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PIQIQSQNP_	REV__ENST00000431582.6_1_X:2527436-2533991:+|nuORF	43.650786325866115	0.37743712540499297	5				NaN	NaN	0	NaN	6121	3821	9942
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9945	29.529	NaN	4742.4	30	0	693.23	0.106	+			17017	HPTSVISGY	9	56	480.74295005348904	959.4713471737781	2	480.7425231933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HPTSVISGY_	ENSG00000120438|ENST00000321394|TCP1;ENST00000412860.1_1_7:42834686-42835559:+|nuORF;TCP1|p.A232Gfs*7|1|0.05|ENSG00000120438|chr6:159784043-159784044|-/C|frameshift_variant	88.64286706044652	0.06869153472052109	5				NaN	NaN	0	NaN	6122	3821	9942
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9946	29.531	NaN	4086	30	0	926.15	0.106	+			15517	GVCSTLTIK	9	50	489.7681932141624	977.5218334951248	2	489.76788330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_GVC(Carbamidomethyl (C))STLTIK_	ENST00000589011.1_1_7:20201474-20224697:-|nuORF	67.49366992349736	0.1516260258713357	5				NaN	NaN	0	NaN	6123	3821	9942
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9947	29.533	NaN	2147.8	30	0	207.47	0.106	+			38843	SSNLFVTGK	9	55	476.7596333927107	951.5047138522215	2	476.7584533691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSNLFVTGK_	ENST00000451596.2_1_9:74929993-74930062:+|nuORF	112.2953585152457	0.026655838328212944	5				NaN	NaN	0	NaN	6124	3821	9942
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9948	29.534	NaN	1766	30	0	252.2	0.036	+			1435	AEYGPQGRAF	10	56	548.2649186387825	1094.515284344365	2	548.265380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEYGPQGRAF_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	72.87924865735499	0.25379688738724415	5				NaN	NaN	0	NaN	6125	3821	9942
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9958	29.556	NaN	7315.6	30	0	2381.4	0.213	+			16800	HPDEKSIITY	10	76	601.806337808068	1201.5981226829358	2	601.8071899414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HPDEKSIITY_	ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1;SPTBN1|p.K503Rfs*24|1|0.06|ENSG00000115306|chr2:54626095-54626095|G/-|frameshift_variant	101.25262130126117	0.07397688119410509	5				NaN	NaN	0	NaN	6132	3824	9957
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9959	29.56	NaN	7202.4	30	0	3323.3	0.106	+			19042	IYGSDRIL	8	53	468.76126314431264	935.5079733554253	2	468.7612609863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IYGSDRIL_	ENSG00000000419|ENST00000371588|DPM1;ENST00000466152.5_1_20:49557422-49575060:-|nuORF	50.0245360154114	0.5941082100236891	5				NaN	NaN	0	NaN	6133	3824	9957
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9960	29.562	NaN	3087.2	30	0	590.88	0.106			+	9794	ENVVPLASV	9	63	464.2608573708236	926.5071618084472	2	464.2608642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ENVVPLASV_	REV__ENSG00000115592|ENST00000439262|PRKAG3;REV__nc|ENSG00000115592|Q9UGI9-2|PRKAG3	56.43379154798735	0.2433427591689151	5				NaN	NaN	0	NaN	6134	3824	9957
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9961	29.564	NaN	3321.1	30	0	477.35	0.106	+			48180	VTADGALAMEK	11	74	553.2813758051951	1104.5481986771902	2	553.282470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTADGALAMEK_	ENSG00000058085|ENST00000264144|LAMC2;nc|ENSG00000058085|Q13753-2|LAMC2	97.59673978297657	0.06767575942783079	5				NaN	NaN	0	NaN	6135	3824	9957
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9962	29.566	NaN	1462.8	30	0	247	0.106			+	44939	TVAQQKVPM	9	59	509.27391551916725	NaN	0	509.2732238769531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_TVAQQKVPM(Oxidation (M))_	REV__ENST00000432228.1_1_2:222826762-222826840:+|nuORF	63.30626980617807	0.13521764763214936	5				NaN	NaN	0	NaN	6136	3824	9957
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9963	29.567	NaN	1150.4	30	0	228.12	0.035	+			4598	ATLHPSVVIA	10	56	504.2980877358996	NaN	0	504.2983703613281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATLHPSVVIA_	ENST00000410053.7_1_2:180810430-180815325:-|nuORF	35.61828744233558	0.3832230071539346	5				NaN	NaN	0	NaN	6137	3824	9957
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9964	29.568	NaN	1107.3	30	0	83.993	0.139	+			29610	PFWADLQP	8	56	487.2404410431609	972.4663291531218	2	487.24029541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PFWADLQP_	ENSG00000105376|ENST00000221980|ICAM5;ENST00000586004.1_1_19:10400719-10402179:+|nuORF;ICAM5|p.G308Afs*10|1|0.48|ENSG00000105376|chr19:10292279-10292279|G/-|frameshift_variant;ICAM5|p.P756Lfs*12|1|0.13|ENSG00000105376|chr19:10295378-10295378|C/-|frameshift_variant	45.9519527083369	0.6193794311207887	5				NaN	NaN	0	NaN	6138	3824	9957
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9977	29.597	NaN	2169	30	0	666.4	0.214			+	7907	DSDADYDELD	10	62	579.2097919980827	1156.4050310629652	2	579.2098999023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DSDADYDELD_	REV__ENSG00000198626|ENST00000366574|RYR2;REV__nc|ENSG00000198626|Q92736-2|RYR2;REV__RYR2|p.A2213Lfs*22|1|0.28|ENSG00000198626|chr1:237633654-237633654|A/-|frameshift_variant;REV__RYR2|p.D3347Tfs*10|1|0.36|ENSG00000198626|chr1:237708990-237708990|G/-|frameshift_variant;REV__RYR2|p.K1745Nfs*25|1|0.49|ENSG00000198626|chr1:237614358-237614358|A/-|frameshift_variant;REV__RYR2|p.L2146Gfs*3|1|0.05|ENSG00000198626|chr1:237628075-237628076|-/GGTCT|frameshift_variant;REV__RYR2|p.S4583Lfs*11|1|0.45|ENSG00000198626|chr1:237792286-237792286|T/-|frameshift_variant	29.14955571784316	0.6417842315402807	5				NaN	NaN	0	NaN	6148	3827	9976
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9978	29.601	NaN	2633.6	30	0	273.18	0.106	+			50506	YANIGKTL	8	58	440.25047944210365	878.4864059510073	2	440.250244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YANIGKTL_	ENSG00000115841|ENST00000354545|RMDN2;ENST00000440353.5_1_2:38177721-38224681:+|nuORF;nc|ENSG00000115841|Q96LZ7-2|RMDN2;nc|ENSG00000115841|Q96LZ7-3|RMDN2;nc|ENSG00000115841|Q96LZ7-4|RMDN2;RMDN2|p.F331Efs*33|1|0.12|ENSG00000115841|chr2:37997459-37997462|TGTT/-|frameshift_variant	101.60071028292904	0.24979566554663588	5				NaN	NaN	0	NaN	6149	3827	9976
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9979	29.603	NaN	3266.1	30	0	219.59	0.106			+	30386	PVPPRPNLYA	10	66	562.3172819057206	NaN	0	562.3167724609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PVPPRPNLYA_	REV__NEU2|p.A317V|1|0.44|ENSG00000115488|chr2:233034864-233034864|C/T|missense_variant	38.80614096846853	0.372755673314885	5				NaN	NaN	0	NaN	6150	3827	9976
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9980	29.604	NaN	2038.5	30	0	333.5	0.106			+	11369	FLIHRDGDL	9	57	543.2889725119903	NaN	0	543.2893676757812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FLIHRDGDL_	REV__ENST00000527786.6_1_11:128642686-128642797:+|nuORF	38.80614096846853	0.28164298475537564	5				NaN	NaN	0	NaN	6151	3827	9976
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9981	29.606	NaN	1382.2	30	0	124.27	0.106			+	44192	TRASAAIDSP	10	55	494.75685917199553	987.4991654107911	2	496.2456970214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TRASAAIDSP_	REV__ENSG00000173621|ENST00000309602|LRFN4;REV__LRFN4|p.A544Pfs*80|1|0.23|ENSG00000173621|chr11:66859912-66859912|G/-|frameshift_variant;REV__LRFN4|p.G524Vfs*100|1|0.26|ENSG00000173621|chr11:66859853-66859853|G/-|frameshift_variant;REV__LRFN4|p.V623*|1|0.31|ENSG00000173621|chr11:66860149-66860149|G/-|frameshift_variant	30.317721548370564	0.6322445173429027	5				NaN	NaN	0	NaN	6152	3827	9976
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9982	29.608	NaN	2782.1	30	0	270.83	0.035	+			38468	SSASALTGLTK	11	65	518.2878739448025	1034.561194956405	2	518.2887573242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSASALTGLTK_	ENSG00000164880|ENST00000404767|INTS1;INTS1|p.Q467Afs*140|1|0.05|ENSG00000164880|chr7:1498439-1498440|-/A|frameshift_variant;INTS1|p.R843Pfs*31|1|0.39|ENSG00000164880|chr7:1487438-1487439|-/G|frameshift_variant	92.23892857375223	0.08960911027004287	5				NaN	NaN	0	NaN	6153	3827	9976
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9983	29.609	NaN	1767.4	30	0	200.72	0.139	+			33546	RLEGMLGPA	9	51	472.2554423770861	942.4963318209723	2	472.2550964355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RLEGMLGPA_	PERM1|p.V673M|1|0.21|ENSG00000187642|chr1:979013-979013|C/T|missense_variant	38.80614096846853	0.43426287593479557	5				NaN	NaN	0	NaN	6154	3827	9976
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9996	29.638	NaN	4133.6	30	0	591.24	0.214	+			16374	HENEDIYKL	9	74	580.7830364733071	1159.5515200134141	2	580.7830200195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HENEDIYKL_	ENSG00000102753|ENST00000261667|KPNA3;ENSG00000186432|ENST00000334256|KPNA4	125.71293069911285	0.017741295328254008	5				NaN	NaN	0	NaN	6164	3830	9995
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9997	29.641	NaN	3519.4	30	0	340.56	0.106	+			35880	SEEGLRNAL	9	61	494.75685917199553	987.4991654107911	2	494.75653076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEEGLRNAL_	ENSG00000119705|ENST00000557342|SLIRP;nc|ENSG00000119705|Q9GZT3-2|SLIRP	71.87747018426188	0.13267044672804276	5				NaN	NaN	0	NaN	6165	3830	9995
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9998	29.643	NaN	2940	30	0	365.48	0.106			+	50960	YIHKALAN	8	53	465.26404630315153	928.5135396731031	2	465.26336669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YIHKALAN_	REV__ENSG00000167306|ENST00000285039|MYO5B;REV__MYO5B|p.R401C|1|0.15|ENSG00000167306|chr18:49974471-49974471|G/A|missense_variant	35.200714571348534	0.6875396545722289	5				NaN	NaN	0	NaN	6166	3830	9995
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9999	29.645	NaN	2885.6	30	0	445.07	0.106				-1	ILCAPGPGPN	10	59	498.25096656250133	994.4873801918027	2	498.25079345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_ILC(Carbamidomethyl (C))APGPGPN_	ENST00000427845.5_1_3:184033058-184033166:+|nuORF	29.14955571784316	0.6417842315402807	5				NaN	NaN	0	NaN	6167	3830	9995
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10000	29.647	NaN	1662.6	30	0	279.84	0.106	+			18268	IPENRVVSY	9	63	538.7906595200092	1075.5667661068182	2	538.790771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IPENRVVSY_	ENSG00000106178|ENST00000222902|CCL24	41.42661286455405	0.403525789677298	5				NaN	NaN	0	NaN	6168	3830	9995
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10001	29.648	NaN	2322.3	30	0	505.73	0.106	+			2224	ALSAALVAK	9	42	422.2688526965443	842.5231524598886	2	422.2685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ALSAALVAK_	ENSG00000110427|ENST00000658780|KIAA1549L;KIAA1549L|p.T1376Hfs*62|1|0.19|ENSG00000110427|chr11:33606771-33606772|-/C|frameshift_variant;KIAA1549L|p.T1376Pfs*16|1|0.38|ENSG00000110427|chr11:33606772-33606772|C/-|frameshift_variant;nc|ENSG00000110427|Q6ZVL6-2|KIAA1549L;nc|ENSG00000110427|Q6ZVL6|KIAA1549L	74.25504064058377	0.12238981753128622	5				NaN	NaN	0	NaN	6169	3830	9995
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10002	29.65	NaN	2276.7	30	0	321.65	0.034	+			5670	AVDSQILPK	9	56	485.7818996960586	969.5492464589172	2	485.7818603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AVDSQILPK_	ENSG00000089009|ENST00000202773|RPL6;ENST00000456481.1_1_7:137407104-137407545:+|nuORF;ENST00000489915.1_1_18:6462145-6462637:-|nuORF	65.46538089061403	0.16805504838372562	5				NaN	NaN	0	NaN	6170	3830	9995
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10014	29.676	NaN	4011.1	30	0	2797.2	0.214	+			304	AAPGPHVAL	9	41	416.73740552298455	831.4602581127691	2	416.73773193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAPGPHVAL_	ENSG00000156381|ENST00000286918|ANKRD9	39.021493756699265	0.43173687394350213	5				NaN	NaN	0	NaN	6179	3833	10013
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10015	29.679	NaN	3662.1	30	0	492.3	0.106	+			17720	IENGKVVSI	9	62	479.78258091270123	957.5506088922025	2	479.7823181152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IENGKVVSI_	ENSG00000176658|ENST00000318217|MYO1D	80.45461616416974	0.09558281504443908	5				NaN	NaN	0	NaN	6180	3833	10013
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10016	29.681	NaN	1433.9	30	0	266.25	0.106	+			7901	DSAAAGASRLL	11	55	516.2795914903688	1030.5446300475376	2	516.2809448242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DSAAAGASRLL_	ENSG00000178445|ENST00000321612|GLDC	28.081489160057373	0.6952392775027776	5				NaN	NaN	0	NaN	6181	3833	10013
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10017	29.683	NaN	2720.6	30	0	503.4	0.106			+	20391	KETAPAAPPL	10	52	497.7804403411331	993.5463277490662	2	498.7773132324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KETAPAAPPL_	REV__ENST00000338560.11_1_17:16319012-16320986:+|nuORF	25.57405402267927	0.6709832231498071	5				NaN	NaN	0	NaN	6182	3833	10013
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10018	29.685	NaN	2532.4	30	0	917.97	0.106	+			12227	GASDVVLYK	9	57	476.261208271286	NaN	0	476.260986328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GASDVVLYK_	ENSG00000116120|ENST00000281828|FARSB;FARSB|p.I265*|1|0.36|ENSG00000116120|chr2:222630168-222630168|T/-|frameshift_variant;FARSB|p.I364Nfs*7|1|0.04|ENSG00000116120|chr2:222624353-222624354|-/AACACTCCTTATTG|frameshift_variant	79.71258880314673	0.07236858429579222	5				NaN	NaN	0	NaN	6183	3833	10013
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10019	29.687	NaN	2377	30	0	484.34	0.035	+			18137	ILINLADSY	9	51	511.2824553078624	1020.5503576825248	2	511.2829284667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ILINLADSY_	tr|U7SSB8|U7SSB8_FUSNUSignalpeptidepeptidaseSppA,67KtypeOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01676PE=3SV=1	60.97194046774394	0.20551255781574032	5				NaN	NaN	0	NaN	6184	3833	10013
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10032	29.714	NaN	6041.5	30	0	422.74	0.214	+			50412	YAAQASQAL	9	63	461.7351208876258	921.4556888420516	2	461.73577880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YAAQASQAL_	ENSG00000118705|ENST00000237530|RPN2;ENST00000462163.1_1_20:35807747-35832332:+|nuORF;RPN2|p.G196Afs*41|1|0.12|ENSG00000118705|chr20:37204794-37204794|G/-|frameshift_variant	118.74307786436346	0.02196067127630568	5				NaN	NaN	0	NaN	6194	3836	10031
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10033	29.718	NaN	1768.2	30	0	167.77	0.106	+			701	AEALVSKGL	9	55	444.2638163033256	NaN	0	444.26385498046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEALVSKGL_	ENSG00000197157|ENST00000354725|SND1;GAS2L3-SND1|1|fusion;SND1|p.A514Qfs*156|1|0.37|ENSG00000197157|chr7:127929195-127929195|A/-|frameshift_variant	67.49366992349736	0.1173583512313808	5				NaN	NaN	0	NaN	6195	3836	10031
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10034	29.72	NaN	2849.5	30	0	418.83	0.034			+	8965	EFGYINHG	8	49	468.7141215392207	935.4136901452414	2	468.71466064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EFGYINHG_	REV__ENSG00000101868|ENST00000379068|POLA1;REV__nc|ENSG00000101868|P09884|POLA1;REV__POLA1|p.Q870Hfs*38|1|0.02|ENSG00000101868|chrX:24745478-24745479|-/CT|frameshift_variant;REV__POLA1|p.Q870Ifs*40|1|0.04|ENSG00000101868|chrX:24745476-24745477|-/ATTAAAAG|frameshift_variant	35.200714571348534	0.6875396545722289	5				NaN	NaN	0	NaN	6196	3836	10031
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10048	29.749	NaN	8591.6	30	0	2984.4	0.214	+			46848	VIFTGGVGK	9	59	439.2607883324415	876.507023731683	2	439.26080322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VIFTGGVGK_	ENSG00000134255|ENST00000357172|CEPT1;ENST00000473474.5_1_1:111715860-111726929:+|nuORF	77.31757898189308	0.1091473830098891	5				NaN	NaN	0	NaN	6207	3839	10047
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10049	29.753	NaN	3895.9	30	0	419.56	0.106	+			6026	AVMEMMSQK	9	63	527.739552401453	1053.464551869706	2	527.7418212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVMEMMSQK_	ENSG00000123349|ENST00000334478|PFDN5;ENST00000552341.5_1_12:53691573-53693126:+|nuORF;nc|ENSG00000123349|Q99471-3|PFDN5	124.08010499294276	0.018729767491916592	5				NaN	NaN	0	NaN	6208	3839	10047
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10050	29.755	NaN	2101.4	30	0	288.84	0.106	+			25526	LPTENVDKM	9	61	523.7632812767804	NaN	0	523.7639770507812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LPTENVDKM_	ENSG00000198420|ENST00000479870|TCAF1;ENST00000392900.3_1_7:143551228-143582358:-|nuORF;ENST00000414990.2_3_7:143295168-143301929:+|nuORF;nc|ENSG00000198420|Q9Y4C2-2|TCAF1	78.26377905018397	0.07733306720594871	5				NaN	NaN	0	NaN	6209	3839	10047
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10051	29.757	NaN	2537.8	30	0	1162.4	0.106				-1	ETYGKMVSGA	10	52	529.7446468700128	1057.4747408068256	2	529.7459716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_ETYGKM(Oxidation (M))VSGA_	ENSG00000154957|ENST00000580306|ZNF18;ZNF18|p.H426Sfs*40|1|0.31|ENSG00000154957|chr17:11978331-11978332|-/A|frameshift_variant	30.317721548370564	0.6322445173429027	5				NaN	NaN	0	NaN	6210	3839	10047
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10052	29.758	NaN	2495.2	30	0	823.09	0.035			+	-1	SIECIAPPD	9	56	501.23372131136426	1000.4528896895285	2	501.2340393066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_SIEC(Carbamidomethyl (C))IAPPD_	REV__ENSG00000197355|ENST00000409858|UAP1L1;REV__ENST00000474787.1_1_9:139974763-139976621:+|nuORF;REV__nc|ENSG00000197355|Q3KQV9-2|UAP1L1	35.61828744233558	0.47037581924408073	5				NaN	NaN	0	NaN	6211	3839	10047
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10066	29.788	NaN	2780.7	30	0	313.7	0.214	+			37035	SIQVVVVQK	9	62	500.31326520504007	998.6119774768802	2	500.3134460449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIQVVVVQK_	ENSG00000197702|ENST00000334956|PARVA;ENST00000533345.5_1_11:12419899-12534890:+|nuORF	66.96192283764107	0.15557981141143568	5				NaN	NaN	0	NaN	6222	3842	10065
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10067	29.792	NaN	3103	30	0	446.11	0.106	+			26826	LVSYSKKI	8	56	469.2895615074278	936.5645700816556	2	469.288818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LVSYSKKI_	ENST00000504323.5_1_5:145524050-145524254:-|nuORF	37.15910966729921	0.6739408393984688	5				NaN	NaN	0	NaN	6223	3842	10065
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10068	29.794	NaN	1691.1	30	0	324.37	0.106			+	9642	ELRTDPPPN	9	61	519.7643241713964	1037.5140954095928	2	519.7645874023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ELRTDPPPN_	REV__ENSG00000107147|ENST00000371757|KCNT1;REV__nc|ENSG00000107147|Q5JUK3-2|KCNT1;REV__nc|ENSG00000107147|Q5JUK3-4|KCNT1;REV__nc|ENSG00000107147|Q5JUK3|KCNT1	19.1035232394073	0.6112419832031293	5				NaN	NaN	0	NaN	6224	3842	10065
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10069	29.795	NaN	1131	30	0	54.599	0.106			+	9240	EGTRTTTLGH	10	54	536.7749831631616	1071.535413393123	2	536.7754516601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EGTRTTTLGH_	REV__ENSG00000277363|ENST00000617146|SRCIN1;REV__nc|ENSG00000277363|Q9C0H9-2|SRCIN1	29.170058357718403	0.6416167986984785	5				NaN	NaN	0	NaN	6225	3842	10065
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10070	29.797	NaN	1313.6	30	0	200.88	0.106	+			8418	EAQNTEAAR	9	50	495.2378118028112	988.4610706724225	2	495.2373962402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EAQNTEAAR_	ENSG00000168071|ENST00000356786|CCDC88B;ENST00000463837.5_1_11:64107738-64120281:+|nuORF;ENST00000492980.1_1_11:64111011-64117377:+|nuORF;ENST00000494080.5_1_11:64109984-64120281:+|nuORF;ENST00000494566.5_1_11:64110218-64117194:+|nuORF;nc|ENSG00000168071|A6NC98-2|CCDC88B;nc|ENSG00000168071|A6NC98-3|CCDC88B;nc|ENSG00000168071|A6NC98-4|CCDC88B	25.57405402267927	0.5642445186134241	5				NaN	NaN	0	NaN	6226	3842	10065
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10071	29.799	NaN	1915.4	30	0	316.8	0.036			+	14394	GTALEADQWL	10	61	552.2718991575465	1102.529245381893	2	552.2720336914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTALEADQWL_	REV__BOC|p.Q445Nfs*66|1|0.29|ENSG00000144857|chr3:113274468-113274468|G/-|frameshift_variant;REV__ENSG00000144857|ENST00000682979|BOC;REV__nc|ENSG00000144857|Q9BWV1|BOC	25.57405402267927	0.6709832231498071	5				NaN	NaN	0	NaN	6227	3842	10065
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10082	29.824	NaN	3970.2	30	0	1174.3	0.214	+			15733	GVSAAFAVK	9	45	425.2449203180861	848.4752877029722	2	425.2446594238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVSAAFAVK_	BZW1|p.L189P|1|0.05|ENSG00000082153|chr2:200818001-200818001|T/C|missense_variant;BZW1|p.N285Tfs*11|2|0.26|ENSG00000082153|chr2:200818782-200818782|A/-|frameshift_variant;BZW1|p.N286*|1|0.04|ENSG00000082153|chr2:200818790-200818791|-/T|frameshift_variant;BZW1|p.S325Rfs*19|1|0.04|ENSG00000082153|chr2:200819989-200819990|-/ACAATATAGAA|frameshift_variant;ENSG00000082153|ENST00000409600|BZW1;nc|ENSG00000082153|Q7L1Q6-2|BZW1;nc|ENSG00000082153|Q7L1Q6-3|BZW1;nc|ENSG00000082153|Q7L1Q6-4|BZW1	122.1759843771914	0.019882474861609503	5				NaN	NaN	0	NaN	6235	3845	10081
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10083	29.828	NaN	4589.3	30	0	744.66	0.106			+	8322	EAKGTVSWK	9	68	503.2715286955556	1004.5285044579113	2	503.2713928222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EAKGTVSWK_	REV__ENSG00000089225|ENST00000405440|TBX5;REV__nc|ENSG00000089225|Q99593-2|TBX5;REV__nc|ENSG00000089225|Q99593-3|TBX5;REV__TBX5|p.E486*|1|0.4|ENSG00000089225|chr12:114355634-114355635|-/G|frameshift_variant	107.00750918261382	0.032051501805654005	5				NaN	NaN	0	NaN	6236	3845	10081
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10084	29.83	NaN	1672.2	30	0	190.23	0.106			+	11113	FFMVMLAF	8	54	511.24622913728604	NaN	0	511.2462158203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_FFM(Oxidation (M))VMLAF_	REV__ENSG00000134744|ENST00000257177|TUT4;REV__nc|ENSG00000134744|Q5TAX3-2|TUT4;REV__nc|ENSG00000134744|Q5TAX3|TUT4	67.3271909547111	1.7418937515398478	5				NaN	NaN	0	NaN	6237	3845	10081
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10085	29.832	NaN	2239	30	0	384.93	0.106	+			41909	SVVGGLAVGK	10	46	443.771556742709	885.528560552218	2	443.7713317871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVVGGLAVGK_	ENSG00000103249|ENST00000382745|CLCN7;ENST00000563822.1_1_16:1505719-1509320:-|nuORF;ENST00000564968.1_1_16:1507514-1509320:-|nuORF;nc|ENSG00000103249|P51798-2|CLCN7;RBCK1-CLCN7|1|fusion;RBCK1-CLCN7|2|fusion	52.936696900407355	0.4300801048568001	5				NaN	NaN	0	NaN	6238	3845	10081
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10086	29.833	NaN	3344	30	0	340.76	0.033	+			459	AAVLRSAAL	9	54	436.2716618512251	870.5287707692502	2	436.2714538574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AAVLRSAAL_	ENSG00000167741|ENST00000381550|GGT6;nc|ENSG00000167741|Q6P531-2|GGT6;nc|ENSG00000167741|Q6P531|GGT6	63.53385203322761	0.18415635464017938	5				NaN	NaN	0	NaN	6239	3845	10081
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10096	29.855	NaN	3625.6	30	0	454.35	0.214	+			11133	FGADARAL	8	59	410.71915037331246	819.4237478134249	2	410.71942138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FGADARAL_	ENSG00000144381|ENST00000388968|HSPD1;ENST00000461097.1_1_2:198361816-198363572:-|nuORF;ENST00000476746.5_1_2:198360008-198364584:-|nuORF;HSPD1|p.G441Vfs*14|1|0.04|ENSG00000144381|chr2:197488385-197488385|C/-|frameshift_variant;nc|ENSG00000144381|P10809-2|HSPD1	82.24051045832904	0.30490469762271794	5				NaN	NaN	0	NaN	6246	3848	10095
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10097	29.859	NaN	2909.6	30	0	575.82	0.106	+			49279	VVQEPGQVFK	10	66	565.8135963609155	1129.612639788631	2	565.814208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVQEPGQVFK_	ENSG00000169180|ENST00000304658|XPO6;ENST00000570007.1_1_16:28117306-28117714:-|nuORF;nc|ENSG00000169180|Q96QU8-2|XPO6;XPO6|p.P1120Lfs*4|1|0.28|ENSG00000169180|chr16:28098557-28098557|G/-|frameshift_variant	59.93077597824379	0.36646980200755325	5				NaN	NaN	0	NaN	6247	3848	10095
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10098	29.861	NaN	2004.6	30	0	139.98	0.036	+			40476	STWEGIQAGK	10	65	538.7715646859506	1075.528576438701	2	538.7726440429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STWEGIQAGK_	ENSG00000177156|ENST00000319006|TALDO1;ENST00000530119.5_1_11:747481-760254:+|nuORF;ENST00000533796.1_1_11:755745-760254:+|nuORF;nc|ENSG00000177156|P37837-2|TALDO1	38.753607047826485	0.5606299674732264	5				NaN	NaN	0	NaN	6248	3848	10095
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10110	29.886	NaN	2744.7	30	0	373.99	0.215	+			50793	YENTKLLSA	9	63	519.7765310910485	1037.5385092488968	2	519.777587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YENTKLLSA_	ENSG00000127324|ENST00000247829|TSPAN8;ENST00000552128.2_1_12:71519116-71532942:-|nuORF	61.691277971877994	0.19951612995419254	5				NaN	NaN	0	NaN	6257	3851	10109
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10111	29.89	NaN	973.04	30	0	104.77	0.106			+	-1	EKMDKLMKI	9	61	576.3115844726562	NaN	0	576.3115844726562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_EKM(Oxidation (M))DKLMKI_	REV__nc|ENSG800|P62684|HERVK_113_gag;REV__nc|ENSG816|P62685|ERVK-8_gag;REV__nc|ENSG820|P63130|ERVK-7_gag;REV__nc|ENSG838|P63145|ERVK-24_gag;REV__nc|ENSG841|P62683|ERVK-21_gag;REV__nc|ENSG846|Q9YNA8|ERVK-19_gag;REV__nc|ENSG856|P87889|ERVK-10_gag	30.317721548370564	0.32449924987115025	5				NaN	NaN	0	NaN	6258	3851	10109
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10112	29.892	NaN	1558	30	0	261.94	0.106			+	26828	LVTEIQNK	8	58	472.7742314471106	943.5339099610212	2	473.2750549316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LVTEIQNK_	REV__tr|U7SLD7|U7SLD7_FUSNUHelicaseSNFOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01975PE=4SV=1	37.15910966729921	0.6739408393984688	5				NaN	NaN	0	NaN	6259	3851	10109
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10113	29.893	NaN	2294.8	30	0	444.79	0.036	+			38492	SSATLNSIVAK	11	63	545.8080107883677	1089.6014686435353	2	546.3115844726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSATLNSIVAK_	ENSG00000007944|ENST00000356840|MYLIP;MYLIP|p.K199Rfs*26|1|0.07|ENSG00000007944|chr6:16143150-16143151|-/GAATT|frameshift_variant;MYLIP|p.R317Kfs*8|1|0.09|ENSG00000007944|chr6:16145014-16145015|-/A|frameshift_variant	68.62578634547417	0.24719609611953774	5				NaN	NaN	0	NaN	6260	3851	10109
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10122	29.914	NaN	7354.8	30	0	1159	0.214	+			5102	ATSPALFNR	9	61	488.76407792833345	975.5136029234669	2	488.7636413574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSPALFNR_	DYNC1H1|p.K3112Hfs*3|1|0.31|ENSG00000197102|chr14:102027998-102027999|-/TCACAAG|frameshift_variant;DYNC1H1|p.R3078W|1|0.11|ENSG00000197102|chr14:102027802-102027802|C/T|missense_variant;DYNC1H1|p.W4201Gfs*43|1|0.42|ENSG00000197102|chr14:102043958-102043958|G/-|frameshift_variant;ENSG00000197102|ENST00000360184|DYNC1H1	56.72105179125745	0.24094814563026265	5				NaN	NaN	0	NaN	6266	3854	10121
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10123	29.917	NaN	3461.1	30	0	544.47	0.106	+			6110	AVNNMFVSK	9	64	505.26055992635975	1008.5065669195195	2	505.2599792480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVNNMFVSK_	ENSG00000100744|ENST00000555181|GSKIP	101.25262130126117	0.03792372629710479	5				NaN	NaN	0	NaN	6267	3854	10121
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10124	29.919	NaN	4044	30	0	816.24	0.106	+			16225	HEDLGHVAL	9	61	495.753527967516	989.492503001832	2	495.7532043457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HEDLGHVAL_	ENSG00000128731|ENST00000261609|HERC2;ENST00000428453.5_1_15:20588586-20667676:-|nuORF;ENST00000430598.5_1_15:20613931-20667676:-|nuORF;ENST00000524476.5_1_15:28882105-28886289:+|nuORF;ENST00000529353.1_1_15:28878360-28886587:+|nuORF;ENST00000529624.5_3_15:28877823-28916776:+|nuORF;ENST00000562687.6_3_16:32769598-32772029:+|nuORF;HERC2|p.G2202Afs*8|1|0.2|ENSG00000128731|chr15:28213923-28213923|C/-|frameshift_variant;HERC2|p.K1446R|1|0.36|ENSG00000128731|chr15:28233678-28233678|T/C|missense_variant;nc|ENSG00000290376|Q9BVR0|HERC2P3	63.30626980617807	0.18605348971131092	5				NaN	NaN	0	NaN	6268	3854	10121
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10125	29.921	NaN	6054.6	30	0	979.89	0.106	+			10498	EVSKIVQTY	9	65	533.7924427034255	1065.570332473651	2	533.7932739257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EVSKIVQTY_	ENSG00000072110|ENST00000394419|ACTN1;nc|ENSG00000072110|P12814-2|ACTN1;nc|ENSG00000072110|P12814-4|ACTN1;nc|ENSG00000072110|P12814|ACTN1	139.97047562133406	0.010493916756945389	5				NaN	NaN	0	NaN	6269	3854	10121
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10126	29.923	NaN	2821.1	30	0	393.02	0.106	+			27476	MLTEQGKK	8	58	467.75354550694595	933.4925380806919	2	467.7526550292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MLTEQGKK_	ENSG00000112992|ENST00000344920|NNT	37.15910966729921	0.6739408393984688	5				NaN	NaN	0	NaN	6270	3854	10121
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10127	29.924	NaN	1851.9	30	0	584.39	0.038			+	29533	PEFQAAKVPDT	11	54	601.806337808068	1201.5981226829358	2	601.8060302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PEFQAAKVPDT_	REV__ENSG00000143226|ENST00000271450|FCGR2A;REV__ENST00000507374.5_1_1:161564627-161571037:+|nuORF;REV__ENST00000537821.2_1_1:161482968-161571037:+|nuORF;REV__nc|ENSG00000143226|P12318-2|FCGR2A;REV__nc|ENSG00000244682|P31995|FCGR2C	28.081489160057373	0.6952392775027776	5				NaN	NaN	0	NaN	6271	3854	10121
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10138	29.95	NaN	19932	30	0	4471	0.214	+			48303	VTEGSFVYK	9	72	515.2659088199206	1028.517264706641	2	515.2664184570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTEGSFVYK_	ENSG00000057608|ENST00000380191|GDI2;GDI2|p.S222Afs*20|1|0.1|ENSG00000057608|chr10:5785197-5785197|T/-|frameshift_variant	225.23655505932527	1.0964639252394441E-12	5				NaN	NaN	0	NaN	6279	3857	10137
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10139	29.953	NaN	2273.4	30	0	1527.2	0.106				-1	 	0	36	343.1988908921453	684.3832288510906	2	343.1988525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6280	3857	10137
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10140	29.955	NaN	3164.8	30	0	399.47	0.106	+			8566	EAWASKDATY	10	67	571.2614594976628	1140.5083660621256	2	571.7634887695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EAWASKDATY_	ENSG00000166508|ENST00000303887|MCM7;nc|ENSG00000166508|P33993-3|MCM7	167.22876102047192	0.004566578872041589	5				NaN	NaN	0	NaN	6281	3857	10137
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10141	29.957	NaN	2321.6	30	0	361.31	0.106			+	29544	PELICDDVDE	10	65	574.2443469412267	1146.4741409492533	2	574.2454223632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PELICDDVDE_	REV__ENSG00000178726|ENST00000377103|THBD;REV__THBD|p.P496Rfs*10|1|0.4|ENSG00000178726|chr20:23048018-23048018|G/-|frameshift_variant	20.94693142431847	0.7087701759873708	5				NaN	NaN	0	NaN	6282	3857	10137
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10142	29.959	NaN	1890.4	30	0	343.42	0.106			+	-1	QNRIQESPM	9	40	373.5133814954755	1117.5183150866267	3	373.51312255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_QNRIQESPM(Oxidation (M))_	REV__ENSG00000107581|ENST00000369144|EIF3A;REV__nc|ENSG00000107581|Q14152-2|EIF3A	27.882242232435846	0.5426732730940306	5				NaN	NaN	0	NaN	6283	3857	10137
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10143	29.961	NaN	2816.7	30	0	790.58	0.039	+			25012	LLGHHVGP	8	47	415.23873117824667	NaN	0	415.2386169433594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LLGHHVGP_	ENST00000366971.8_1_1:213032234-213037122:+|nuORF	33.49298260027079	1.7418937515398478	5				NaN	NaN	0	NaN	6284	3857	10137
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10144	29.961	NaN	1010.4	30	0	189.29	0.138	+			42244	TAAPPAQPL	9	40	433.24244542359037	NaN	0	433.2428283691406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TAAPPAQPL_	BRD2|p.G595Vfs*6|1|0.59|ENSG00000204256|chr6:32978327-32978327|G/-|frameshift_variant;ENSG00000204256|ENST00000374825|BRD2;nc|ENSG00000204256|P25440-2|BRD2;nc|ENSG00000204256|P25440-3|BRD2;nc|ENSG00000204256|P25440-4|BRD2	37.15910966729921	0.2899585034171616	5				NaN	NaN	0	NaN	6285	3857	10137
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10160	29.996	NaN	3852.8	30	0	1015.5	0.214			+	21280	KLPSFAVN	8	57	438.25292898987664	874.4913050465533	2	438.2526550292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KLPSFAVN_	REV__ENSG00000188641|ENST00000370192|DPYD	32.81241826257853	0.7059802730411993	5				NaN	NaN	0	NaN	6298	3860	10159
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10161	30	NaN	3572.3	30	0	552.26	0.106	+			25575	LQERTAQL	8	62	479.76947857790645	957.5244042226129	2	479.76922607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LQERTAQL_	nc|ENSG00000253868|Q96M78|FER1L6-AS2	69.6276240434122	0.4100012001731381	5				NaN	NaN	0	NaN	6299	3860	10159
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10162	30.002	NaN	4701.8	30	0	1441.4	0.106			+	24787	LIGNQGII	8	54	414.2527785703547	826.4910042075094	2	414.2528991699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LIGNQGII_	REV__ENSG00000154330|ENST00000396396|PGM5;REV__ENST00000604870.6_1_9:70993123-71019929:+|nuORF;REV__nc|ENSG00000154330|Q15124-2|PGM5	28.2542754592877	0.7411748056684583	5				NaN	NaN	0	NaN	6300	3860	10159
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10163	30.004	NaN	3278.6	30	0	653.27	0.106	+			4688	ATLSICSPK	9	59	460.24909102445207	918.4836291157042	2	460.2491760253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATLSICSPK_	ENSG00000121060|ENST00000316881|TRIM25;ENST00000572021.5_1_17:54969063-54989474:-|nuORF;TRIM25|p.G621D|1|0.15|ENSG00000121060|chr17:56891731-56891731|C/T|missense_variant	93.1432384553994	0.056003526918089595	5				NaN	NaN	0	NaN	6301	3860	10159
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10164	30.006	NaN	3059.8	30	0	520.65	0.106	+			1935	AISEYIATK	9	64	498.27375311715036	994.5329533011007	2	498.27374267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AISEYIATK_	ENSG00000095002|ENST00000233146|MSH2;MSH2|p.M813Nfs*11|1|0.17|ENSG00000095002|chr2:47478497-47478498|-/A|frameshift_variant;MSH2|p.T806Kfs*4|1|0.2|ENSG00000095002|chr2:47478472-47478478|CACTCAC/-|frameshift_variant;nc|ENSG00000095002|P43246-2|MSH2	42.86426827375447	0.38666266728046506	5				NaN	NaN	0	NaN	6302	3860	10159
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10165	30.007	NaN	2342.3	30	0	263.47	0.036	+			47197	VLYENPNLK	9	66	545.3010568818542	NaN	0	545.3008422851562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VLYENPNLK_	DYNC1H1|p.W4201Gfs*43|1|0.42|ENSG00000197102|chr14:102043958-102043958|G/-|frameshift_variant;ENSG00000197102|ENST00000360184|DYNC1H1	65.46538089061403	0.1260090208616529	5				NaN	NaN	0	NaN	6303	3860	10159
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10166	30.008	NaN	1677.6	30	0	174.35	0.14	+			17938	IGLWSAFLC	9	56	505.26055992635975	1008.5065669195195	2	505.7646179199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IGLWSAFLC_	ENSG00000080493|ENST00000264485|SLC4A4;nc|ENSG00000080493|Q9Y6R1-2|SLC4A4;nc|ENSG00000080493|Q9Y6R1-3|SLC4A4;nc|ENSG00000080493|Q9Y6R1-4|SLC4A4;nc|ENSG00000080493|Q9Y6R1-5|SLC4A4;SLC4A4|p.N1031Sfs*30|1|0.06|ENSG00000080493|chr4:71560246-71560247|-/GCTAC|frameshift_variant	38.80614096846853	0.43426287593479557	5				NaN	NaN	0	NaN	6304	3860	10159
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10181	30.041	NaN	25012	30	0	3769.7	0.214	+			8193	EAAVAIKAM	9	82	452.25188333265834	902.4892137321167	2	452.25177001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EAAVAIKAM_	ENSG00000132507|ENST00000336458|EIF5A;ENSG00000253626|ENST00000520547|EIF5AL1;nc|ENSG00000132507|P63241-2|EIF5A	176.41073772950895	0.0016726359177844747	5				NaN	NaN	0	NaN	6316	3863	10180
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10182	30.044	NaN	13827	30	0	1876.9	0.106	+			3938	ATATANQIILK	11	80	572.3401441995708	1142.6657354659415	2	572.3402709960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATATANQIILK_	nc|ENSG00000139793|Q5VZF2-2|MBNL2	169.6522961985778	2.909638704099596E-05	5				NaN	NaN	0	NaN	6317	3863	10180
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10183	30.046	NaN	4318.9	30	0	459.92	0.106	+			40456	STVQILGAEK	10	66	523.297652147576	1044.5807513619518	2	523.29833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STVQILGAEK_	ENSG00000055044|ENST00000264279|NOP58;ENSG00000101361|ENST00000329276|NOP56;ENST00000480992.5_1_20:2635438-2636687:+|nuORF;ENST00000484998.5_1_20:2635830-2636687:+|nuORF	95.4829727501206	0.09968275784893506	5				NaN	NaN	0	NaN	6318	3863	10180
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10184	30.048	NaN	4933	30	0	501.19	0.106	+			45529	TYIDKSTQL	9	69	534.7820508838531	1067.5495488345061	2	534.7830810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TYIDKSTQL_	ENSG00000119965|ENST00000481909|C10orf88	49.536043120802724	0.308405419312776	5				NaN	NaN	0	NaN	6319	3863	10180
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10185	30.05	NaN	3815.2	30	0	677.94	0.106				-1	TFLGQLLHM	9	57	538.2817337018253	1074.5489144704504	2	538.2821655273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_TFLGQLLHM(Oxidation (M))_	LRRC31|p.P223H|1|0.39|ENSG00000114248|chr3:169856491-169856491|G/T|missense_variant	57.81127852772723	0.2318599694398087	5				NaN	NaN	0	NaN	6320	3863	10180
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10186	30.052	NaN	25527	30	0	11322	0.037	+			40741	SVCVLDLRK	9	64	363.87413700393824	1088.6005816120148	3	363.8743591308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_SVC(Carbamidomethyl (C))VLDLRK_	ENSG00000101849|ENST00000645353|TBL1X;ENSG00000177565|ENST00000457928|TBL1XR1;nc|ENSG00000101849|O60907-2|TBL1X;TBL1X|p.G568S|1|0.45|ENSG00000101849|chrX:9714998-9714998|G/A|missense_variant	76.16968421966216	0.11411088698345859	5				NaN	NaN	0	NaN	6321	3863	10180
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10187	30.052	NaN	3587.7	30	0	563.94	0.14	+			14683	GTIGDMMQK	9	65	490.7301365469851	979.4457201607702	2	490.72967529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GTIGDMMQK_	ENSG00000107874|ENST00000369937|CUEDC2;ENST00000477994.1_1_10:104183924-104192326:-|nuORF	75.04331003522576	0.118981335847003	5				NaN	NaN	0	NaN	6322	3863	10180
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10203	30.087	NaN	9538.1	30	0	1647.9	0.214	+			3793	ATAGFTIGR	9	71	447.245524427536	892.476495921872	2	447.2451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATAGFTIGR_	ENSG00000184634|ENST00000374080|MED12;MED12|p.E1337Kfs*8|1|0.26|ENSG00000184634|chrX:71130173-71130173|G/-|frameshift_variant;nc|ENSG00000184634|Q93074-2|MED12;nc|ENSG00000184634|Q93074-3|MED12	131.03138772384656	0.014687601201650916	5				NaN	NaN	0	NaN	6335	3866	10202
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10204	30.091	NaN	2596.6	30	0	483.5	0.106	+			48258	VTDGFSSLK	9	66	477.2504453812043	952.4863378292087	2	477.2500915527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTDGFSSLK_	ENSG00000110245|ENST00000227667|APOC3	68.84614121027924	0.14577793175421136	5				NaN	NaN	0	NaN	6336	3866	10202
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10205	30.093	NaN	1940	30	0	348.43	0.106			+	13493	GLLSVCVKGN	10	57	495.27553172923126	988.5365105252625	2	495.7764587402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GLLSVCVKGN_	REV__ENSG00000175931|ENST00000319380|UBE2O	35.61828744233558	0.588957954432594	5				NaN	NaN	0	NaN	6337	3866	10202
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10206	30.095	NaN	6734.9	30	0	785.38	0.106	+			39686	STIGVDGSVYK	11	73	563.292945791209	1124.571338649218	2	563.2930908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STIGVDGSVYK_	ENSG00000159399|ENST00000290573|HK2;ENST00000447818.2_1_X:79828255-79829731:-|nuORF	133.9934435666947	0.0009855027020917232	5				NaN	NaN	0	NaN	6338	3866	10202
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10207	30.096	NaN	1786.7	30	0	99.904	0.106	+			17401	IAQALNQIK	9	51	499.80379609138964	997.5930392495793	2	499.80303955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IAQALNQIK_	tr|U7SXZ5|U7SXZ5_FUSNUTypeIVsecretionsystemproteinVirD4OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00892PE=3SV=1	55.50420428727701	0.2510918378945873	5				NaN	NaN	0	NaN	6339	3866	10202
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10208	30.098	NaN	7931.7	30	0	964.64	0.034	+			1031	AEKLGGSAVI	10	62	472.7742314471106	943.5339099610212	2	472.77362060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEKLGGSAVI_	ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65622809-65623088:-|nuORF	66.9202029811203	0.3029018092171124	5				NaN	NaN	0	NaN	6340	3866	10202
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10209	30.099	NaN	883.3	30	0	189	0.138	+			2646	AQKQGRKVI	9	37	343.2156574418495	NaN	0	343.2156066894531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AQKQGRKVI_	nc|ENSG00000079263|Q13342-2|SP140	26.69291269510374	0.34280015626154364	5				NaN	NaN	0	NaN	6341	3866	10202
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10222	30.128	NaN	13179	30	0	1991.5	0.214	+			50561	YAVEGRDL	8	82	461.7349412957084	921.4553296582168	2	461.73480224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YAVEGRDL_	ENSG00000163479|ENST00000295702|SSR2;ENST00000368311.5_1_1:155984733-155990735:-|nuORF;ENST00000472898.5_1_1:155981561-155990687:-|nuORF;ENST00000484320.6_1_1:155988041-155990687:-|nuORF;ENST00000532074.5_1_1:155984857-155990687:-|nuORF	66.42927471994793	0.4381325844043345	5				NaN	NaN	0	NaN	6351	3869	10221
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10223	30.131	NaN	2177.4	30	0	230.84	0.106	+			24391	LFVQLSKSK	9	69	525.3196444307897	1048.6247359283793	2	525.319091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LFVQLSKSK_	ARHGAP5|p.E893*|2|0.24|ENSG00000100852|chr14:32093338-32093339|-/T|frameshift_variant;ARHGAP5|p.F892Lfs*9|2|0.33|ENSG00000100852|chr14:32093339-32093339|T/-|frameshift_variant;ARHGAP5|p.F935Lfs*5|1|0.32|ENSG00000100852|chr14:32093469-32093469|T/-|frameshift_variant;ARHGAP5|p.K192Nfs*3|1|0.29|ENSG00000100852|chr14:32091239-32091239|A/-|frameshift_variant;ARHGAP5|p.N943Kfs*10|1|0.43|ENSG00000100852|chr14:32093489-32093490|-/A|frameshift_variant;ARHGAP5|p.S936*|1|0.32|ENSG00000100852|chr14:32093468-32093469|-/T|frameshift_variant;ARHGAP5|p.Y502Mfs*3|1|0.31|ENSG00000100852|chr14:32092168-32092168|T/-|frameshift_variant;ENSG00000100852|ENST00000345122|ARHGAP5;ENST00000407916.2_1_7:55001700-55002231:+|nuORF;nc|ENSG00000100852|Q13017-2|ARHGAP5	34.172542307311794	0.4838870758800184	5				NaN	NaN	0	NaN	6352	3869	10221
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10224	30.133	NaN	1450.5	30	0	125.57	0.106			+	15993	HAMIMGSYEL	10	60	576.2633280431354	NaN	0	576.26318359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HAMIMGSYEL_	REV__ENST00000581417.5_1_17:62083756-62084088:-|nuORF	32.81241826257853	0.3924360933802784	5				NaN	NaN	0	NaN	6353	3869	10221
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10225	30.135	NaN	2904.3	30	0	858.14	0.106			+	19107	IYKMAYMKK	9	43	392.5488341607278	1174.6246730823834	3	392.5487365722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IYKMAYMKK_	REV__STK32A|p.M54I|1|0.3|ENSG00000169302|chr5:147279300-147279300|G/A|missense_variant	29.14955571784316	0.5308295550522326	5				NaN	NaN	0	NaN	6354	3869	10221
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10226	30.137	NaN	1348	30	0	184.28	0.106	+			19059	IYGSSHSW	8	52	468.7141215392207	935.4136901452414	2	468.7138366699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IYGSSHSW_	DUOX1|p.S186N|1|0.29|ENSG00000137857|chr15:45135535-45135535|G/A|missense_variant;ENSG00000137857|ENST00000389037|DUOX1;ENSG00000140279|ENST00000389039|DUOX2;nc|ENSG00000140279|Q9NRD8|DUOX2	33.51558372728122	0.7005509609380386	5				NaN	NaN	0	NaN	6355	3869	10221
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10227	30.139	NaN	1727	30	0	148.27	0.036			+	-1	EGCLLNVHF	9	60	544.7641582408356	1087.5137635484712	2	544.764892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_EGC(Carbamidomethyl (C))LLNVHF_	REV__ENSG00000178934|ENST00000314980|LGALS7B;REV__ENSG00000205076|ENST00000378626|LGALS7;REV__LGALS7|p.R54Gfs*80|1|0.41|ENSG00000205076|chr19:38771966-38771966|G/-|frameshift_variant	35.61828744233558	0.47037581924408073	5				NaN	NaN	0	NaN	6356	3869	10221
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10241	30.169	NaN	5569.5	30	0	809.48	0.214	+			14500	GTCLLIANK	9	67	495.27553172923126	988.5365105252625	2	495.2756652832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GTC(Carbamidomethyl (C))LLIANK_	CARM1|p.I452Sfs*12|1|0.18|ENSG00000142453|chr19:10920679-10920683|TTGTG/-|frameshift_variant;ENSG00000142453|ENST00000327064|CARM1;nc|ENSG00000142453|Q86X55-1|CARM1	148.04295825190792	0.0073252839830139265	5				NaN	NaN	0	NaN	6367	3872	10240
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10242	30.172	NaN	1862.8	30	0	663.86	0.106				-1	 	0	35	336.2274704586836	670.4403879841673	2	336.2274169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6368	3872	10240
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10243	30.174	NaN	2717.9	30	0	540.48	0.106			+	-1	SMTAAVIAAL	10	55	482.26226947125923	962.5099860093185	2	482.26226806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_SM(Oxidation (M))TAAVIAAL_	REV__tr|U7SRD4|U7SRD4_FUSNUSSSfamilysolute:Na+symporterOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01559PE=3SV=1	44.116797842482775	0.5112108506279902	5				NaN	NaN	0	NaN	6369	3872	10240
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10244	30.176	NaN	3168.6	30	0	1054.9	0.106	+			39221	STAGLIIGK	9	56	430.266093821336	858.5176347094721	2	430.2660827636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STAGLIIGK_	ENSG00000104967|ENST00000263257|NOVA2;ENSG00000139910|ENST00000539517|NOVA1;nc|ENSG00000139910|P51513-5|NOVA1	96.19043198914106	0.047412499214244314	5				NaN	NaN	0	NaN	6370	3872	10240
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10245	30.178	NaN	2055.9	30	0	133.97	0.106	+			16753	HLRQRVLQ	8	68	525.3196444307897	1048.6247359283793	2	525.3200073242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HLRQRVLQ_	nc|ENSG00000153266|Q8TBJ5-2|FEZF2	28.2542754592877	0.7411748056684583	5				NaN	NaN	0	NaN	6371	3872	10240
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10246	30.179	NaN	2354.1	30	0	305.2	0.106			+	-1	CLWCIVKG	8	59	489.74953137518463	977.4845098171693	2	489.749755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_CLWC(Carbamidomethyl (C))IVKG_	REV__ENSG00000121236|ENST00000380097|TRIM6;REV__ENSG00000132256|ENST00000380034|TRIM5;REV__ENST00000507320.5_1_11:5624851-5625952:+|nuORF;REV__nc|ENSG00000121236|Q9C030|TRIM6;REV__nc|ENSG00000132256|Q9C035-2|TRIM5;REV__nc|ENSG00000132256|Q9C035-3|TRIM5;REV__nc|ENSG00000132256|Q9C035-4|TRIM5;REV__nc|ENSG00000132256|Q9C035-5|TRIM5;REV__nc|ENSG00000132256|Q9C035-6|TRIM5;REV__TRIM5|p.N390Kfs*2|1|0.25|ENSG00000132256|chr11:5665121-5665122|-/T|frameshift_variant	65.89745868150666	0.44339748671293633	5				NaN	NaN	0	NaN	6372	3872	10240
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10247	30.181	NaN	1068.4	30	0	76.624	0.034	+			8097	DYDIAARK	8	50	476.248146251912	NaN	0	476.2476806640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DYDIAARK_	ENSG00000006715|ENST00000310301|VPS41;nc|ENSG00000006715|P49754-2|VPS41;nc|ENSG00000006715|P49754-3|VPS41	44.116797842482775	1.7418937515398478	5				NaN	NaN	0	NaN	6373	3872	10240
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10258	30.207	NaN	12611	30	0	3227.1	0.214	+			39963	STMGYMMAK	9	64	510.22100278189913	1018.4274526305983	2	510.2218322753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STMGYMMAK_	ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;ENST00000518337.1_1_8:74128289-74128592:-|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P	153.03582135801034	0.006161527642367307	5				NaN	NaN	0	NaN	6381	3875	10257
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10259	30.21	NaN	7133.3	30	0	2870.6	0.106	+			32387	QVCDVVLNH	9	65	542.2661431114864	1082.5177332897727	2	542.2670288085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_QVC(Carbamidomethyl (C))DVVLNH_	ENSG00000050327|ENST00000056217|ARHGEF5;nc|ENSG00000050327|Q12774-2|ARHGEF5	109.47833844074708	0.029530294723441826	5				NaN	NaN	0	NaN	6382	3875	10257
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10260	30.212	NaN	3567	30	0	405.72	0.106	+			28095	NAFKEITTM	9	60	535.7633784366182	NaN	0	535.7638549804688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_NAFKEITTM(Oxidation (M))_	ENSG00000137947|ENST00000370500|GTF2B;ENST00000486078.1_1_1:89325774-89329699:-|nuORF;ENST00000494819.5_1_1:89324456-89357188:-|nuORF	124.08010499294276	0.0015010289275841425	5				NaN	NaN	0	NaN	6383	3875	10257
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10261	30.214	NaN	2874.3	30	0	346.57	0.035			+	-1	GIWYMLSL	8	61	499.75405419686916	997.4935554605383	2	499.7568664550781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_GIWYM(Oxidation (M))LSL_	REV__ENSG00000203857|ENST00000369413|HSD3B1	54.76467175910256	0.5536104764165384	5				NaN	NaN	0	NaN	6384	3875	10257
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10272	30.239	NaN	25969	30	0	3212.9	0.214	+			20524	KFIDTTSKF	9	82	543.7946916561654	1085.5748303791306	2	543.7954711914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KFIDTTSKF_	ENSG00000100316|ENST00000216146|RPL3;ENSG00000140986|ENST00000268661|RPL3L;ENST00000417615.1_1_14:99439218-99439536:-|nuORF;ENST00000473638.5_1_22:39708982-39709710:-|nuORF	164.45504665044191	0.003713414289755139	5				NaN	NaN	0	NaN	6392	3878	10271
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10273	30.243	NaN	1917	30	0	169.57	0.106	+			43463	TGNPTVIKM	9	57	480.76236284918036	959.5101727651607	2	480.7628479003906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TGNPTVIKM_	ENSG00000140575|ENST00000268182|IQGAP1;ENSG00000145703|ENST00000274364|IQGAP2;ENST00000512383.1_1_5:75964652-75969784:+|nuORF;IQGAP1|p.S1529Afs*10|1|0.15|ENSG00000140575|chr15:90492665-90492665|A/-|frameshift_variant;IQGAP2|p.Q1499Rfs*15|1|0.05|ENSG00000145703|chr5:76701201-76701202|-/CCGAG|frameshift_variant;nc|ENSG00000145703|Q13576-2|IQGAP2;nc|ENSG00000145703|Q13576-3|IQGAP2	70.8162118820467	0.13725933411854815	5				NaN	NaN	0	NaN	6393	3878	10271
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10274	30.245	NaN	1713.1	30	0	136.66	0.106			+	21219	KLGARTELY	9	61	525.8008730525781	1049.5871931719562	2	525.8016357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KLGARTELY_	REV__ENST00000272444.7_1_2:73989718-73989775:-|nuORF	37.81151784470057	0.4459294069877048	5				NaN	NaN	0	NaN	6394	3878	10271
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10275	30.246	NaN	1501.3	30	0	82.674	0.036	+			28185	NAQNITVIVQ	10	56	550.309343507779	NaN	0	550.3087158203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NAQNITVIVQ_	ENSG00000081014|ENST00000261842|AP4E1;ENST00000558439.5_1_15:51226794-51242057:+|nuORF;nc|ENSG00000081014|Q9UPM8-2|AP4E1	29.170058357718403	0.40439580130713204	5				NaN	NaN	0	NaN	6395	3878	10271
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10287	30.272	NaN	54642	30	0	6535.7	0.192	+			20525	KFIDTTSKF	9	80	543.7946916561654	1085.5748303791306	2	544.7989501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KFIDTTSKF_	ENSG00000100316|ENST00000216146|RPL3;ENSG00000140986|ENST00000268661|RPL3L;ENST00000417615.1_1_14:99439218-99439536:-|nuORF;ENST00000473638.5_1_22:39708982-39709710:-|nuORF	117.5257442709337	0.022697614825424036	5				NaN	NaN	0	NaN	6404	3881	10286
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10288	30.275	NaN	6682.7	30	0	1793.1	0.106	+			44738	TTLTSQYIK	9	71	527.7921330664523	1053.5697131997044	2	527.7929077148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTLTSQYIK_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	120.8684288430529	0.02067403653475984	5				NaN	NaN	0	NaN	6405	3881	10286
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10289	30.277	NaN	6498.9	30	0	1155.3	0.106	+			7250	DALRCVNNY	9	74	562.7610726527979	1123.5075923723957	2	562.7615966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_DALRC(Carbamidomethyl (C))VNNY_	ENSG00000143155|ENST00000367833|TIPRL;nc|ENSG00000143155|O75663-2|TIPRL;TIPRL|p.F156Lfs*13|1|0.33|ENSG00000143155|chr1:168191448-168191448|T/-|frameshift_variant	70.8162118820467	0.13725933411854815	5				NaN	NaN	0	NaN	6406	3881	10286
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10290	30.279	NaN	3350.9	30	0	661.47	0.106	+			30937	QELQELNRV	9	67	564.8044966005313	1127.5944402678624	2	564.8043212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QELQELNRV_	ENST00000486498.1_1_2:171811278-171813015:+|nuORF	65.46538089061403	0.16805504838372562	5				NaN	NaN	0	NaN	6407	3881	10286
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10291	30.281	NaN	2390.9	30	0	364.82	0.106	+			12487	GEEARRYQ	8	65	504.74634984182734	1007.4781467504547	2	504.7463684082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GEEARRYQ_	ENSG00000079841|ENST00000521978|RIMS1;nc|ENSG00000079841|Q86UR5-2|RIMS1;nc|ENSG00000079841|Q86UR5-3|RIMS1;nc|ENSG00000079841|Q86UR5-4|RIMS1;nc|ENSG00000079841|Q86UR5-5|RIMS1;nc|ENSG00000079841|Q86UR5-6|RIMS1;nc|ENSG00000079841|Q86UR5-7|RIMS1;nc|ENSG00000079841|Q86UR5-8|RIMS1;RIMS1|p.R824*|1|0.13|ENSG00000079841|chr6:72251013-72251014|-/T|frameshift_variant	53.351449002276354	0.5676011784961348	5				NaN	NaN	0	NaN	6408	3881	10286
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10292	30.283	NaN	1266	30	0	91.263	0.106	+			12659	GEIRATAF	8	52	432.7322113496461	NaN	0	432.73236083984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GEIRATAF_	ENSG00000132383|ENST00000254719|RPA1;RPA1|p.N274Mfs*5|1|0.18|ENSG00000132383|chr17:1879272-1879272|A/-|frameshift_variant	54.776311868738084	1.7418937515398478	5				NaN	NaN	0	NaN	6409	3881	10286
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10293	30.284	NaN	2359.8	30	0	356.18	0.034			+	24661	LGVAWAWF	8	59	475.2511623221155	948.487771711031	2	475.2510681152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LGVAWAWF_	REV__ENST00000577700.5_1_7:45022669-45022849:-|nuORF	43.626045697637714	0.6338121648150432	5				NaN	NaN	0	NaN	6410	3881	10286
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10306	30.312	NaN	12136	30	0	4917.3	0.214	+			18834	IVAGSLITK	9	54	451.28923836176523	900.5639237903305	2	451.28912353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IVAGSLITK_	ENSG00000196504|ENST00000545856|PRPF40A;nc|ENSG00000196504|O75400-2|PRPF40A;nc|ENSG00000196504|O75400|PRPF40A;PRPF40A|p.K411Sfs*40|2|0.19|ENSG00000196504|chr2:152672597-152672597|T/-|frameshift_variant;PRPF40A|p.Q412Afs*4|1|0.16|ENSG00000196504|chr2:152672596-152672597|-/T|frameshift_variant	59.93077597824379	0.21419174904018318	5				NaN	NaN	0	NaN	6420	3884	10305
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10307	30.315	NaN	4232.9	30	0	1005.7	0.106	+			23377	LAADCAHEL	9	67	471.7212134241398	941.4278739150797	2	471.7207336425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LAADCAHEL_	ENSG00000157379|ENST00000288111|DHRS1;ENST00000558340.1_1_14:24760067-24761569:-|nuORF;ENST00000561137.5_1_14:24760413-24761527:-|nuORF;ENST00000561273.5_1_14:24760714-24761569:-|nuORF	68.78682469695295	0.14603441672067394	5				NaN	NaN	0	NaN	6421	3884	10305
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10308	30.317	NaN	6207.1	30	0	2271.3	0.106	+			50706	YEERVQAVV	9	68	546.7878354284809	1091.5611179237617	2	546.788818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YEERVQAVV_	ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1;SPTBN1|p.K503Rfs*24|1|0.06|ENSG00000115306|chr2:54626095-54626095|G/-|frameshift_variant	59.93077597824379	0.21419174904018318	5				NaN	NaN	0	NaN	6422	3884	10305
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10309	30.319	NaN	2455.6	30	0	275.21	0.106	+			46178	VDVSGPKL	8	55	407.7368883224983	813.4592237117967	2	407.7371520996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VDVSGPKL_	AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK;ENSG00000124942|ENST00000378024|AHNAK	64.20726635412375	0.4601301477144759	5				NaN	NaN	0	NaN	6423	3884	10305
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10310	30.321	NaN	2686.6	30	0	719.01	0.106	+			50077	WGCSWRSY	8	59	522.7224650958137	1043.4303772584274	2	522.7232666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_WGCSWRSY_	ENST00000280083.7_2_14:39736586-39746165:+|nuORF	47.91560031466742	0.6071945918984287	5				NaN	NaN	0	NaN	6424	3884	10305
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10311	30.323	NaN	1434.1	30	0	104.58	0.034			+	37469	SLKGISSLY	9	49	484.27648273443134	966.5384125356627	2	484.2763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLKGISSLY_	REV__ENSG00000009413|ENST00000368802|REV3L;REV__nc|ENSG00000009413|O60673-2|REV3L;REV__REV3L|p.G2684Vfs*11|1|0.35|ENSG00000009413|chr6:111329724-111329724|T/-|frameshift_variant;REV__REV3L|p.I1992Lfs*2|1|0.29|ENSG00000009413|chr6:111367814-111367814|T/-|frameshift_variant;REV__REV3L|p.N1694Mfs*4|2|0.16|ENSG00000009413|chr6:111373274-111373274|T/-|frameshift_variant	29.14955571784316	0.5308295550522326	5				NaN	NaN	0	NaN	6425	3884	10305
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10312	30.323	NaN	1475.2	30	0	134.89	0.14			+	20651	KGKKINSTY	9	56	519.8011685776468	NaN	0	519.759033203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KGKKINSTY_	REV__ENSG00000129657|ENST00000436233|SEC14L1;REV__nc|ENSG00000129657|Q92503-2|SEC14L1;REV__nc|ENSG00000129657|Q92503-3|SEC14L1	37.81151784470057	0.28666463014928195	5				NaN	NaN	0	NaN	6426	3884	10305
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10330	30.363	NaN	6471.9	30	0	575.72	0.214	+			5665	AVDQIAFQK	9	69	510.2800323201057	NaN	0	510.2798767089844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVDQIAFQK_	ENSG00000144554|ENST00000675286|FANCD2;FANCD2|p.I1249Nfs*2|1|0.48|ENSG00000144554|chr3:10090346-10090347|-/A|frameshift_variant;FANCD2|p.N890Ifs*14|1|0.36|ENSG00000144554|chr3:10073312-10073312|A/-|frameshift_variant;nc|ENSG00000144554|Q9BXW9-1|FANCD2;nc|ENSG00000144554|Q9BXW9-3|FANCD2;nc|ENSG00000144554|Q9BXW9-4|FANCD2	102.0615471778698	0.01728177075344923	5				NaN	NaN	0	NaN	6441	3887	10329
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10331	30.366	NaN	2394	30	0	285.45	0.106	+			28188	NAQRQDIAF	9	58	531.7697047438453	1061.5248565544905	2	531.770263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NAQRQDIAF_	ANXA2|p.A74T|1|0.39|ENSG00000182718|chr15:60364452-60364452|C/T|missense_variant;ANXA2|p.S64I|1|0.3|ENSG00000182718|chr15:60364481-60364481|C/A|missense_variant;ENSG00000182718|ENST00000451270|ANXA2;ENST00000557937.5_1_15:60655071-60678274:-|nuORF;nc|ENSG00000182718|P07355-2|ANXA2;NPTN-ANXA2|1|fusion	52.936696900407355	0.27249468807391813	5				NaN	NaN	0	NaN	6442	3887	10329
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10332	30.368	NaN	2558.6	30	0	427.18	0.106	+			43203	TEVIHTGTL	9	60	485.76376017562063	969.5129674180413	2	485.7634582519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TEVIHTGTL_	ENSG00000182986|ENST00000682928|ZNF320;ENSG00000189190|ENST00000692063|ZNF600;ENSG00000203326|ENST00000474037|ZNF525;ENSG00000204604|ENST00000595646|ZNF468;ENSG00000213020|ENST00000652185|ZNF611;ENSG00000213793|ENST00000638862|ZNF888;ENSG00000213799|ENST00000458035|ZNF845;nc|ENSG00000189190|Q6ZNG1|ZNF600;nc|ENSG00000204604|Q5VIY5-2|ZNF468;nc|ENSG00000213020|Q8N823-2|ZNF611;nc|ENSG00000293246|Q8N8H1|ZNF321P;ZNF468|p.K232Nfs*4|1|0.3|ENSG00000204604|chr19:52841598-52841598|T/-|frameshift_variant;ZNF525|p.S149Yfs*51|1|0.05|ENSG00000203326|chr19:53381024-53381025|-/ATTGC|frameshift_variant;ZNF611|p.F463Lfs*36|1|0.09|ENSG00000213020|chr19:52705666-52705666|A/-|frameshift_variant;ZNF611|p.K221Nfs*6|1|0.35|ENSG00000213020|chr19:52706392-52706392|T/-|frameshift_variant	64.20726635412375	0.17854274437659667	5				NaN	NaN	0	NaN	6443	3887	10329
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10333	30.37	NaN	5102.4	30	0	841.35	0.106	+			51221	YPTQPGQGY	9	61	505.73229822293564	1009.4500435126713	2	505.732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YPTQPGQGY_	ENSG00000089280|ENST00000254108|FUS;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;FUS|p.P152Lfs*33|1|0.31|ENSG00000089280|chr16:31184324-31184324|C/-|frameshift_variant;nc|ENSG00000089280|P35637-2|FUS	75.04331003522576	0.118981335847003	5				NaN	NaN	0	NaN	6444	3887	10329
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10334	30.372	NaN	1615.5	30	0	488.49	0.106	+			7108	CYPSPLNYY	9	63	560.24650843758	NaN	0	560.2467651367188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_CYPSPLNYY_	ENSG00000164024|ENST00000296411|METAP1	31.954861631926434	0.3162336699109506	5				NaN	NaN	0	NaN	6445	3887	10329
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10335	30.374	NaN	2334.3	30	0	342.02	0.034	+			26143	LSPYLWEG	8	64	482.74260872687944	NaN	0	482.7950744628906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSPYLWEG_	ENST00000356731.9_1_5:179050473-179050569:-|nuORF	47.91560031466742	1.7418937515398478	5				NaN	NaN	0	NaN	6446	3887	10329
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10336	30.374	NaN	2574.3	30	0	294.07	0.14	+			28980	NSKGPLGASSL	11	61	515.7811067092015	NaN	0	515.77978515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NSKGPLGASSL_	ENSG00000173320|ENST00000308497|STOX2;nc|ENSG00000173320|Q9P2F5-2|STOX2	51.19269402634007	0.30675235723580535	5				NaN	NaN	0	NaN	6447	3887	10329
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10354	30.414	NaN	10661	30	0	1955.3	0.214	+			23435	LADDSVRSL	9	73	488.2589622175518	974.5033715019036	2	488.25885009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LADDSVRSL_	ENSG00000138078|ENST00000409411|PREPL;nc|ENSG00000138078|Q4J6C6-2|PREPL;nc|ENSG00000138078|Q4J6C6|PREPL	112.10723106719422	0.02684780151337622	5				NaN	NaN	0	NaN	6462	3890	10353
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10355	30.417	NaN	4425.5	30	0	656.88	0.106	+			18679	ITAKVATHL	9	71	477.29246531487354	952.5703776965471	2	477.2928771972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ITAKVATHL_	ENSG00000116147|ENST00000367674|TNR;nc|ENSG00000116147|Q92752-2|TNR	58.78195531508484	0.22376836668196862	5				NaN	NaN	0	NaN	6463	3890	10353
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10356	30.419	NaN	2642.5	30	0	303.05	0.106	+			36221	SELTQPKL	8	59	458.2606315132537	914.5067100933074	2	458.2610168457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SELTQPKL_	ENSG00000197601|ENST00000354817|FAR1;ENST00000524933.1_1_11:13716477-13732426:+|nuORF	101.60071028292904	0.24979566554663588	5				NaN	NaN	0	NaN	6464	3890	10353
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10357	30.421	NaN	3616.4	30	0	585.26	0.106			+	17701	IELRITDS	8	63	473.76369263969474	945.5128323461895	2	473.7637939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IELRITDS_	REV__ENSG00000166938|ENST00000319212|DIS3L;REV__nc|ENSG00000166938|Q8TF46-2|DIS3L;REV__nc|ENSG00000166938|Q8TF46-4|DIS3L	63.30626980617807	0.4690498839812213	5				NaN	NaN	0	NaN	6465	3890	10353
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10358	30.423	NaN	3968.9	30	0	446.39	0.106	+			5428	ATYILEAGK	9	58	483.2684351061117	964.5223172790235	2	483.2683410644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATYILEAGK_	ENSG00000148444|ENST00000376836|COMMD3;ENST00000463409.6_1_10:22605382-22615407:+|nuORF;ENST00000470045.1_1_10:22605346-22607030:+|nuORF;ENST00000472673.5_1_10:22606461-22607284:+|nuORF;ENST00000479958.6_1_10:22605346-22607121:+|nuORF;ENST00000483684.1_1_10:22606823-22607748:+|nuORF;ENST00000496071.5_1_10:22605382-22607284:+|nuORF;ENST00000602574.5_1_10:22605346-22607236:+|nuORF	77.53327743719008	0.1082147015697554	5				NaN	NaN	0	NaN	6466	3890	10353
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10359	30.424	NaN	1468.6	30	0	154.49	0.106			+	17433	IATSDQDISI	10	53	531.7697047438453	1061.5248565544905	2	531.7701416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IATSDQDISI_	REV__tr|U7SMA5|U7SMA5_FUSNURibosomalRNAsmallsubunitmethyltransferaseHOS=FusobacteriumnucleatumCTI-5OX=1316586GN=rsmHPE=3SV=1	47.657333605630114	0.47858658696240314	5				NaN	NaN	0	NaN	6467	3890	10353
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10360	30.426	NaN	1099.3	30	0	69.494	0.035			+	18537	ISLPLNREP	9	60	519.8007202148438	NaN	0	519.8007202148438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ISLPLNREP_	REV__ENSG00000155465|ENST00000674313|SLC7A7	35.61828744233558	0.29773779453147337	5				NaN	NaN	0	NaN	6468	3890	10353
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10372	30.452	NaN	8460.2	30	0	5154.8	0.215			+	46006	VAVGGIVVLNG	11	63	499.3053356858449	996.5961184384898	2	499.30548095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VAVGGIVVLNG_	REV__EPHA2|p.A536V|1|0.32|ENSG00000142627|chr1:16134543-16134543|G/A|missense_variant	51.52775601994872	0.4002081502334604	5				NaN	NaN	0	NaN	6477	3893	10371
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10373	30.455	NaN	4284.6	30	0	450.4	0.106	+			26221	LSSKEVAIP	9	60	472.2763803851186	NaN	0	472.2762145996094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSSKEVAIP_	ENST00000377110.7_2_9:73461461-73477999:-|nuORF	58.78195531508484	0.1545138866451181	5				NaN	NaN	0	NaN	6478	3893	10371
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10374	30.457	NaN	3517.3	30	0	508.61	0.106	+			16876	HPGSHVHGPR	10	60	540.7747550135326	1079.5349570938652	2	540.7753295898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HPGSHVHGPR_	nc|ENSG00000183260|Q9H3Z7|ABHD16B	49.44154591367651	0.46214596422418036	5				NaN	NaN	0	NaN	6479	3893	10371
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10375	30.459	NaN	3608.6	30	0	215.61	0.106	+			36192	SELITKAVAA	10	64	501.79503290789063	1001.5755128825813	2	501.7949523925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SELITKAVAA_	ENSG00000124575|ENST00000244534|H1-3;ENSG00000168298|ENST00000304218|H1-4;ENSG00000184357|ENST00000331442|H1-5;ENSG00000187837|ENST00000343677|H1-2	59.93077597824379	0.36646980200755325	5				NaN	NaN	0	NaN	6480	3893	10371
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10376	30.461	NaN	1628.2	30	0	152.45	0.106	+			13467	GLLAAAAAGL	10	51	414.2527785703547	826.4910042075094	2	414.252685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GLLAAAAAGL_	ENSG00000178752|ENST00000546354|ERFE	26.79610172149135	0.6610034878437611	5				NaN	NaN	0	NaN	6481	3893	10371
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10377	30.463	NaN	1287	30	0	129.64	0.035	+			46044	VCEIWTNQ	8	57	496.7272901408526	991.4400273485052	2	496.72662353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VCEIWTNQ_	ENSG00000185046|ENST00000683438|ANKS1B;nc|ENSG00000185046|Q7Z6G8-3|ANKS1B;nc|ENSG00000185046|Q7Z6G8-5|ANKS1B;nc|ENSG00000185046|Q7Z6G8-8|ANKS1B	31.954861631926434	0.7126016770032289	5				NaN	NaN	0	NaN	6482	3893	10371
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10390	30.49	NaN	5120.5	30	0	537.1	0.214	+			18326	IPTRVVTNY	9	65	531.8004955579526	1061.586438182705	2	531.8013305664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IPTRVVTNY_	ENSG00000198959|ENST00000361475|TGM2;ENST00000468262.5_1_20:36766485-36793648:-|nuORF;nc|ENSG00000198959|P21980-2|TGM2	89.02883481214508	0.06760336634167786	5				NaN	NaN	0	NaN	6492	3896	10389
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10391	30.494	NaN	1375.4	30	0	371.42	0.106			+	-1	SIKSSNLNIP	10	59	557.8086423727897	1113.6027318123793	2	557.8092041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SIKSSNLNIP_	REV__KCNC2|p.S304Hfs*12|1|0.31|ENSG00000166006|chr12:75051095-75051095|A/-|frameshift_variant	37.81151784470057	0.569310847604193	5				NaN	NaN	0	NaN	6493	3896	10389
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10392	30.496	NaN	3938.9	30	0	378.19	0.106	+			5559	AVANIVNSVK	10	65	507.80066464295487	1013.5867763527098	2	507.8006896972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVANIVNSVK_	ENSG00000042286|ENST00000307864|AIFM2;nc|ENSG00000042286|Q9BRQ8-2|AIFM2	79.48907831485694	0.19979514868675113	5				NaN	NaN	0	NaN	6494	3896	10389
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10393	30.497	NaN	1391.1	30	0	94.025	0.036	+			17344	IAIVPDGKYGA	11	63	552.3083001595389	1102.6020473858778	2	552.3075561523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IAIVPDGKYGA_	ENSG00000152578|ENST00000282499|GRIA4	41.42661286455405	0.5384226294179143	5				NaN	NaN	0	NaN	6495	3896	10389
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10407	30.527	NaN	14087	30	0	1871.8	0.214	+			1173	AENKDEIAL	9	73	501.75849217596215	1001.5024314187243	2	501.7585144042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AENKDEIAL_	ENSG00000079246|ENST00000392132|XRCC5;ENST00000429133.5_1_2:216974075-216982480:+|nuORF;ENST00000476360.1_1_2:216974075-216981630:+|nuORF;XRCC5|p.E287Kfs*11|2|0.25|ENSG00000079246|chr2:216127589-216127589|A/-|frameshift_variant;XRCC5|p.Q488Rfs*29|1|0.06|ENSG00000079246|chr2:216141305-216141305|C/-|frameshift_variant	98.58198989935565	0.04066992115528678	5				NaN	NaN	0	NaN	6506	3899	10406
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10408	30.531	NaN	5074	30	0	1023.6	0.106			+	26218	LSSIVLAGTG	10	75	459.268110495342	916.521668057484	2	459.2682800292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSSIVLAGTG_	REV__DNAJC13|p.G1667Vfs*22|1|0.33|ENSG00000138246|chr3:132505410-132505410|A/-|frameshift_variant;REV__DNAJC13|p.T1375Hfs*28|1|0.18|ENSG00000138246|chr3:132496626-132496626|A/-|frameshift_variant;REV__ENSG00000138246|ENST00000260818|DNAJC13	82.24051045832904	0.17731618517892733	5				NaN	NaN	0	NaN	6507	3899	10406
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10409	30.533	NaN	2871.2	30	0	996.9	0.106			+	4861	ATPPPRMDLL	10	44	370.8696609099914	NaN	0	370.8694152832031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATPPPRMDLL_	REV__ENSG00000182256|ENST00000615808|GABRG3	30.317721548370564	0.4006274431774794	5				NaN	NaN	0	NaN	6508	3899	10406
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10410	30.534	NaN	1370.1	30	0	111.97	0.106	+			50443	YADPVNAHY	9	58	525.238412867105	NaN	0	525.2383422851562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YADPVNAHY_	ENSG00000119314|ENST00000374257|PTBP3;nc|ENSG00000119314|O95758-1|PTBP3;nc|ENSG00000119314|O95758-2|PTBP3;nc|ENSG00000119314|O95758-4|PTBP3;nc|ENSG00000119314|O95758-5|PTBP3;nc|ENSG00000119314|O95758-7|PTBP3;nc|ENSG00000119314|O95758|PTBP3	35.61828744233558	0.29773779453147337	5				NaN	NaN	0	NaN	6509	3899	10406
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10411	30.536	NaN	1307.2	30	0	302.28	0.106			+	7462	DFTHSPAI	8	49	444.21624281118306	NaN	0	444.21612548828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DFTHSPAI_	REV__tr|U7SLB4|U7SLB4_FUSNUNodBhomologydomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01957PE=4SV=1	40.5726180659479	1.7418937515398478	5				NaN	NaN	0	NaN	6510	3899	10406
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10412	30.538	NaN	1437.4	30	0	215.09	0.035	+			30296	PTLCPTPHPA	10	58	517.2626172087781	NaN	0	517.2614135742188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PTLCPTPHPA_	ENST00000446716.5_1_2:220084109-220084259:-|nuORF	37.15910966729921	0.3781637092648983	5				NaN	NaN	0	NaN	6511	3899	10406
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10425	30.565	NaN	5831.8	30	0	2284.1	0.214			+	27124	MAQGIAIAQA	10	60	487.26032826194256	972.5061035906851	2	487.2602844238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MAQGIAIAQA_	REV__ENSG00000115020|ENST00000264380|PIKFYVE;REV__ENST00000477200.1_1_2:209163383-209167125:+|nuORF;REV__nc|ENSG00000115020|Q9Y2I7-2|PIKFYVE;REV__nc|ENSG00000115020|Q9Y2I7-3|PIKFYVE;REV__nc|ENSG00000115020|Q9Y2I7-4|PIKFYVE;REV__PIKFYVE|p.M1447Wfs*31|1|0.24|ENSG00000115020|chr2:208335870-208335870|A/-|frameshift_variant;REV__PIKFYVE|p.N886Tfs*7|1|0.26|ENSG00000115020|chr2:208325465-208325465|A/-|frameshift_variant	49.44154591367651	0.46214596422418036	5				NaN	NaN	0	NaN	6521	3902	10424
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10426	30.569	NaN	4944.4	30	0	933.31	0.106			+	24102	LEKKLTSP	8	64	458.27879730568446	914.543041678169	2	458.2789306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LEKKLTSP_	REV__ENSG00000138835|ENST00000695401|RGS3;REV__ENST00000488620.5_1_9:116327559-116353744:+|nuORF;REV__nc|ENSG00000138835|P49796-1|RGS3;REV__nc|ENSG00000138835|P49796-4|RGS3;REV__nc|ENSG00000138835|P49796-6|RGS3;REV__nc|ENSG00000138835|P49796|RGS3	85.16082228582465	0.29211966821764696	5				NaN	NaN	0	NaN	6522	3902	10424
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10427	30.571	NaN	4556.5	30	0	851.01	0.106	+			13989	GSCSDFQFK	9	64	538.2291660920753	1074.4437792509505	2	538.2296752929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_GSC(Carbamidomethyl (C))SDFQFK_	ENSG00000124429|ENST00000262753|POF1B;nc|ENSG00000124429|Q8WVV4-1|POF1B	90.60085204095205	0.06317133949006545	5				NaN	NaN	0	NaN	6523	3902	10424
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10428	30.573	NaN	4226.8	30	0	779.37	0.106	+			35070	SAFGQAFSK	9	62	471.73761562003625	941.4606783068725	2	471.7376403808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SAFGQAFSK_	ENSG00000129696|ENST00000431156|TTI2	53.59686742100583	0.26699147868981316	5				NaN	NaN	0	NaN	6524	3902	10424
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10429	30.575	NaN	1941.5	30	0	295.31	0.106				-1	DVWMFSSH	8	61	512.7150302169111	NaN	0	512.7147216796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_DVWM(Oxidation (M))FSSH_	ENSG00000149243|ENST00000539798|KLHL35;ENST00000460787.1_1_11:75137492-75141101:-|nuORF;KLHL35|p.E513Gfs*17|1|0.33|ENSG00000149243|chr11:75423718-75423719|CC/-|frameshift_variant;nc|ENSG00000149243|Q6PF15-2|KLHL35	35.200714571348534	1.7418937515398478	5				NaN	NaN	0	NaN	6525	3902	10424
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10430	30.576	NaN	2115.4	30	0	342.16	0.106	+			628	ADVKVHIL	8	50	447.77355478847846	NaN	0	447.7737731933594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ADVKVHIL_	ENSG00000115946|ENST00000263657|PNO1	53.351449002276354	1.7418937515398478	5				NaN	NaN	0	NaN	6526	3902	10424
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10431	30.578	NaN	1228.3	30	0	106.41	0.035			+	27946	MVHLWSMN	8	54	517.2321166992188	NaN	0	517.2321166992188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_MVHLWSM(Oxidation (M))N_	REV__ENSG00000144406|ENST00000673920|UNC80;REV__ENST00000489023.5_1_2:210693994-210832362:+|nuORF;REV__nc|ENSG00000144406|Q8N2C7-2|UNC80;REV__nc|ENSG00000144406|Q8N2C7-4|UNC80;REV__nc|ENSG00000144406|Q8N2C7-7|UNC80;REV__nc|ENSG00000144406|Q8N2C7|UNC80;REV__UNC80|p.C1944Afs*12|1|0.28|ENSG00000144406|chr2:209933850-209933850|C/-|frameshift_variant;REV__UNC80|p.N2032*|1|0.42|ENSG00000144406|chr2:209936855-209936856|-/T|frameshift_variant;REV__UNC80|p.P2700Hfs*13|1|0.23|ENSG00000144406|chr2:209972238-209972238|C/-|frameshift_variant	44.53106598305862	1.7418937515398478	5				NaN	NaN	0	NaN	6527	3902	10424
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10443	30.604	NaN	4826.9	30	0	605.24	0.214	+			39917	STMAIIVNK	9	65	488.77807233186707	975.5415917305342	2	488.7781066894531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STMAIIVNK_	ENSG00000082898|ENST00000401558|XPO1;ENST00000428210.5_1_2:61705957-61719950:-|nuORF;ENST00000461407.5_1_2:61712881-61715780:-|nuORF;ENST00000492182.5_1_2:61710065-61713073:-|nuORF	122.1759843771914	0.019882474861609503	5				NaN	NaN	0	NaN	6536	3905	10442
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10444	30.607	NaN	2393.6	30	0	241.53	0.106	+			20526	KFIDTTSKF	9	64	543.7946916561654	1085.5748303791306	2	543.7953491210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KFIDTTSKF_	ENSG00000100316|ENST00000216146|RPL3;ENSG00000140986|ENST00000268661|RPL3L;ENST00000417615.1_1_14:99439218-99439536:-|nuORF;ENST00000473638.5_1_22:39708982-39709710:-|nuORF	106.68306549817024	0.032382560583716295	5				NaN	NaN	0	NaN	6537	3905	10442
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10445	30.609	NaN	3195.9	30	0	796.05	0.106	+			1343	AETRAGLTL	9	60	466.2637054258146	NaN	0	466.2637939453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AETRAGLTL_	ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;nc|ENSG00000185164|Q5JPE7-3|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2;NOMO1|p.P1102Hfs*42|1|0.36|ENSG00000103512|chr16:14886838-14886838|C/-|frameshift_variant	70.8162118820467	0.10318768208603292	5				NaN	NaN	0	NaN	6538	3905	10442
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10446	30.611	NaN	4002.9	30	0	477.58	0.106	+			47162	VLSKASLTFT	10	68	533.8116473793738	1065.6087418255474	2	533.8125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VLSKASLTFT_	INPP1|p.G281Vfs*45|1|0.04|ENSG00000151689|chr2:190371034-190371035|-/GT|frameshift_variant	44.377184641726394	0.5088115166961078	5				NaN	NaN	0	NaN	6539	3905	10442
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10447	30.613	NaN	2020.4	30	0	297.28	0.106			+	43070	TELMVLCI	8	46	461.24272892342987	NaN	0	461.2427062988281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TELMVLCI_	REV__ENSG00000169564|ENST00000303577|PCBP1	46.76643321282427	1.7418937515398478	5				NaN	NaN	0	NaN	6540	3905	10442
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10448	30.615	NaN	4143.2	30	0	1975.1	0.106	+			48894	VVDIPFRSK	9	43	354.20984938312677	1059.6077187495803	3	354.2096862792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VVDIPFRSK_	ENSG00000081177|ENST00000685843|EXD2;nc|ENSG00000081177|Q9NVH0-2|EXD2	36.446750945000026	0.4619375763483977	5				NaN	NaN	0	NaN	6541	3905	10442
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10449	30.616	NaN	1513.5	30	0	115.62	0.036				-1	ARALYMGRT	9	60	527.7748649121005	1053.535176891001	2	527.775146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_ARALYM(Oxidation (M))GRT_	ENST00000472442.2_1_19:1922970-1924280:+|nuORF	31.529811441608018	0.5085848003137583	5				NaN	NaN	0	NaN	6542	3905	10442
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10460	30.642	NaN	12272	30	0	5736.1	0.214	+			31338	QISEVVVVK	9	75	500.80530040948	999.5960478857601	2	500.8053283691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QISEVVVVK_	ENSG00000099622|ENST00000587896|CIRBP;nc|ENSG00000099622|Q14011-2|CIRBP;nc|ENSG00000099622|Q14011|CIRBP	44.377184641726394	0.36891676396732553	5				NaN	NaN	0	NaN	6550	3908	10459
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10461	30.645	NaN	8728.1	30	0	3989.9	0.106				-1	 	0	52	575.2978869921483	1148.5812210510965	2	575.298095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6551	3908	10459
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10462	30.647	NaN	4949.3	30	0	3127.6	0.035	+			3974	ATATTEALPL	10	58	494.27139214968594	986.5282313661719	2	494.27099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATATTEALPL_	ENSG00000041982|ENST00000350763|TNC;nc|ENSG00000041982|P24821-3|TNC	35.61828744233558	0.588957954432594	5				NaN	NaN	0	NaN	6552	3908	10459
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10476	30.677	NaN	28734	30	0	8822.4	0.214	+			29208	NVPVGKVL	8	69	413.2631871182187	824.5118213032374	2	413.2631530761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NVPVGKVL_	ENSG00000104517|ENST00000520539|UBR5;nc|ENSG00000104517|O95071-2|UBR5;UBR5|p.A1046Rfs*49|1|0.21|ENSG00000104517|chr8:102299518-102299519|-/G|frameshift_variant;UBR5|p.E2121Kfs*28|1|0.39|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant;UBR5|p.E2121Rfs*13|1|0.28|ENSG00000104517|chr8:102277120-102277121|-/T|frameshift_variant;UBR5|p.F2571Lfs*4|2|0.31|ENSG00000104517|chr8:102262044-102262044|A/-|frameshift_variant;UBR5|p.I1021*|1|0.41|ENSG00000104517|chr8:102300046-102300046|G/-|frameshift_variant;UBR5|p.I1021Hfs*5|1|0.23|ENSG00000104517|chr8:102300045-102300046|-/G|frameshift_variant;UBR5|p.K2120Rfs*13|1|0.24|ENSG00000104517|chr8:102277121-102277122|TT/-|frameshift_variant	40.5726180659479	0.6527593143185008	5				NaN	NaN	0	NaN	6563	3911	10475
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10477	30.681	NaN	2668.6	30	0	878.47	0.106	+			30901	QEKTIEEQL	9	65	559.2902363577119	1116.5659197822238	2	559.290771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QEKTIEEQL_	nc|ENSG00000157654|Q9Y2D5-3|PALM2AKAP2;nc|ENSG00000157654|Q9Y2D5-5|PALM2AKAP2;nc|ENSG00000157654|Q9Y2D5-6|PALM2AKAP2;nc|ENSG00000157654|Q9Y2D5-7|PALM2AKAP2;nc|ENSG00000157654|Q9Y2D5|PALM2AKAP2	95.81516180277367	0.04847050768394289	5				NaN	NaN	0	NaN	6564	3911	10475
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10478	30.682	NaN	1665.1	30	0	189.5	0.035			+	908	AEIEERSAI	9	58	509.26406997992274	NaN	0	509.2640686035156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEIEERSAI_	REV__ENSG00000116221|ENST00000360840|MRPL37	37.81151784470057	0.28666463014928195	5				NaN	NaN	0	NaN	6565	3911	10475
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10491	30.71	NaN	15440	30	0	4318	0.214	+			6319	AVTDAIMSR	9	61	482.24972428275515	962.4848956323103	2	482.2497253417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVTDAIMSR_	ENSG00000162298|ENST00000377190|SYVN1;ENST00000449943.5_1_11:64897669-64899838:-|nuORF;nc|ENSG00000162298|Q86TM6-2|SYVN1;nc|ENSG00000162298|Q86TM6-3|SYVN1;SYVN1|p.N368Qfs*129|1|0.33|ENSG00000162298|chr11:65130663-65130664|-/G|frameshift_variant;SYVN1|p.N368Tfs*117|1|0.4|ENSG00000162298|chr11:65130664-65130664|G/-|frameshift_variant	141.52041321563706	0.009766778904176347	5				NaN	NaN	0	NaN	6575	3914	10490
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10492	30.713	NaN	3110.9	30	0	476.96	0.106	+			11912	FVAEQKVEY	9	63	556.7845330765273	1111.5545132198545	2	556.7857055664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FVAEQKVEY_	ENSG00000114867|ENST00000346169|EIF4G1;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;ENST00000460829.5_1_3:184046782-184052693:+|nuORF;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1	109.47833844074708	0.029530294723441826	5				NaN	NaN	0	NaN	6576	3914	10490
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10493	30.715	NaN	4615.9	30	0	651.22	0.106	+			8220	EAEKSQLIM	9	60	524.77030835444	1047.5260637756799	2	524.7711791992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EAEKSQLIM_	ENSG00000137312|ENST00000376389|FLOT1;nc|ENSG00000137312|O75955-2|FLOT1	125.81401957644128	0.01768009863045738	5				NaN	NaN	0	NaN	6577	3914	10490
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10494	30.717	NaN	1377.3	30	0	163.2	0.106	+			19060	IYGSSHSW	8	49	468.7141215392207	935.4136901452414	2	468.7139587402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IYGSSHSW_	DUOX1|p.S186N|1|0.29|ENSG00000137857|chr15:45135535-45135535|G/A|missense_variant;ENSG00000137857|ENST00000389037|DUOX1;ENSG00000140279|ENST00000389039|DUOX2;nc|ENSG00000140279|Q9NRD8|DUOX2	28.2542754592877	0.7411748056684583	5				NaN	NaN	0	NaN	6578	3914	10490
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10495	30.719	NaN	5087.9	30	0	1401.8	0.036	+			9910	EQQRLAELS	9	71	537.2827439712646	1072.5509350093291	2	537.7853393554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EQQRLAELS_	ENSG00000105197|ENST00000607714|TIMM50;nc|ENSG00000105197|Q3ZCQ8-2|TIMM50;nc|ENSG00000105197|Q3ZCQ8-3|TIMM50	54.776311868738084	0.25715957988447635	5				NaN	NaN	0	NaN	6579	3914	10490
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10508	30.746	NaN	17733	30	0	4272.8	0.214	+			2682	AQNPSLFVK	9	79	502.2819869920272	1002.5494210508544	2	502.28204345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AQNPSLFVK_	ENSG00000117410|ENST00000472174|ATP6V0B;nc|ENSG00000117410|Q99437-2|ATP6V0B	112.41091882917199	0.026537921851008135	5				NaN	NaN	0	NaN	6589	3917	10507
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10509	30.75	NaN	24148	30	0	6652.3	0.106			+	26948	LYGKVQEL	8	67	475.27104416017426	948.5275353871485	2	475.2708740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LYGKVQEL_	REV__ENSG00000163817|ENST00000358525|SLC6A20;REV__nc|ENSG00000163817|Q9NP91-2|SLC6A20	134.81075121484326	0.23895231276701365	5				NaN	NaN	0	NaN	6590	3917	10507
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10510	30.752	NaN	2790.8	30	0	365.33	0.106	+			41200	SVLDLSVHK	9	65	499.2870598608095	996.559566788419	2	499.28717041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVLDLSVHK_	ENSG00000116731|ENST00000311066|PRDM2;nc|ENSG00000116731|Q13029-2|PRDM2;nc|ENSG00000116731|Q13029-3|PRDM2;nc|ENSG00000116731|Q13029-5|PRDM2;PRDM2|p.G1390Efs*14|1|0.21|ENSG00000116731|chr1:13781963-13781964|GG/-|frameshift_variant;PRDM2|p.N1426Ifs*3|1|0.17|ENSG00000116731|chr1:13782065-13782065|A/-|frameshift_variant;PRDM2|p.P1648Qfs*14|1|0.24|ENSG00000116731|chr1:13782731-13782731|G/-|frameshift_variant	72.2432373244024	0.13108886737667413	5				NaN	NaN	0	NaN	6591	3917	10507
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10511	30.754	NaN	2200.4	30	0	151.3	0.106			+	-1	KKKKVPVCG	9	65	522.3231188917379	1042.6316848502756	2	522.3235473632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_KKKKVPVC(Carbamidomethyl (C))G_	REV__ENST00000227507.2_1_11:69467203-69467281:+|nuORF	38.80614096846853	0.43426287593479557	5				NaN	NaN	0	NaN	6592	3917	10507
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10512	30.755	NaN	2177.6	30	0	249.59	0.106	+			959	AEKAFVSV	8	54	425.7366477937665	849.458742654333	2	425.7366943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEKAFVSV_	ABCC3|p.L968Afs*31|1|0.33|ENSG00000108846|chr17:50675920-50675921|-/G|frameshift_variant;ENSG00000108846|ENST00000285238|ABCC3;ENST00000502426.5_1_17:48736553-48755440:+|nuORF;nc|ENSG00000108846|O15438-2|ABCC3;nc|ENSG00000108846|O15438-4|ABCC3	75.04331003522576	0.3648751570195447	5				NaN	NaN	0	NaN	6593	3917	10507
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10513	30.757	NaN	2065.7	30	0	285.88	0.036	+			39930	STMEQLVEK	9	61	532.7682246684899	NaN	0	532.768310546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STMEQLVEK_	ENSG00000133812|ENST00000256190|SBF2;ENST00000533770.5_1_11:9861043-10215451:-|nuORF;nc|ENSG00000133812|Q86WG5-3|SBF2;SBF2|p.E1445Sfs*15|1|0.09|ENSG00000133812|chr11:9808111-9808111|T/-|frameshift_variant	50.033510581677724	0.206462018841031	5				NaN	NaN	0	NaN	6594	3917	10507
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10514	30.758	NaN	1590.4	30	0	162.14	0.139			+	24280	LEVTVASIS	9	56	459.7603986480433	917.5062443628866	2	459.7605285644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LEVTVASIS_	REV__ENSG00000110442|ENST00000263401|COMMD9;REV__nc|ENSG00000110442|Q9P000-2|COMMD9	42.396135135203025	0.392153681582562	5				NaN	NaN	0	NaN	6595	3917	10507
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10525	30.785	NaN	1103.2	30	0	227.24	0.141	+			24429	LGATLKLQ	8	49	422.26847150048656	NaN	0	422.2688903808594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LGATLKLQ_	ENSG00000187609|ENST00000340951|EXD3;ENST00000475006.1_1_9:140262369-140269195:-|nuORF;nc|ENSG00000187609|Q8N9H8-4|EXD3	42.396135135203025	1.7418937515398478	5				NaN	NaN	0	NaN	6603	3920	10524
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10538	30.814	NaN	3659.4	30	0	1013.4	0.214	+			19605	KDFIRPKL	8	63	508.8161179264562	1015.6176829197124	2	508.8160400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KDFIRPKL_	ENSG00000133083|ENST00000360631|DCLK1;nc|ENSG00000133083|O15075-2|DCLK1	44.116797842482775	0.6307669463330267	5				NaN	NaN	0	NaN	6613	3923	10537
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10539	30.818	NaN	2345.4	30	0	735.62	0.106	+			10909	FDGRVVAK	8	53	446.2558943920064	890.4972358508128	2	446.25567626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FDGRVVAK_	ENSG00000143183|ENST00000367881|TMCO1;nc|ENSG00000143183|Q9UM00-2|TMCO1;nc|ENSG00000143183|Q9UM00|TMCO1	82.24051045832904	0.30490469762271794	5				NaN	NaN	0	NaN	6614	3923	10537
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10540	30.819	NaN	2823.8	30	0	814	0.106			+	9114	EGLAARFR	8	53	460.2581219285665	918.501690923933	2	460.25775146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EGLAARFR_	REV__ENSG00000204396|ENST00000375688|VWA7;REV__nc|ENSG00000204396|Q9Y334-2|VWA7;REV__VWA7|p.L622*|1|0.47|ENSG00000204396|chr6:31767176-31767176|G/-|frameshift_variant	47.91560031466742	0.6071945918984287	5				NaN	NaN	0	NaN	6615	3923	10537
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10541	30.821	NaN	3237.6	30	0	546.48	0.106	+			29268	NYGDQVQHF	9	70	554.2461823833727	1106.4778118335453	2	554.2465209960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NYGDQVQHF_	ENSG00000154016|ENST00000284154|GRAP	85.86182877749512	0.07653218437724067	5				NaN	NaN	0	NaN	6616	3923	10537
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10542	30.823	NaN	4028.2	30	0	1825	0.106	+			32348	QTYEEALYK	9	63	572.7798020323208	1143.5450511314416	2	572.7802124023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QTYEEALYK_	ENSG00000106541|ENST00000419304|AGR2	75.04331003522576	0.118981335847003	5				NaN	NaN	0	NaN	6617	3923	10537
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10543	30.825	NaN	1341.5	30	0	70.847	0.034	+			43978	TPFQLLRT	8	61	488.28424479201385	974.5539366508277	2	488.283935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TPFQLLRT_	ENST00000590578.5_1_19:44669911-44674228:+|nuORF	37.81151784470057	0.6698925118251505	5				NaN	NaN	0	NaN	6618	3923	10537
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10544	30.825	NaN	1087.9	30	0	100.42	0.141	+			48319	VTFLSRNLE	9	58	539.7985345563504	NaN	0	539.7990112304688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VTFLSRNLE_	ENSG00000135424|ENST00000257879|ITGA7;nc|ENSG00000135424|Q13683-10|ITGA7;nc|ENSG00000135424|Q13683-13|ITGA7;nc|ENSG00000135424|Q13683-3|ITGA7;nc|ENSG00000135424|Q13683-9|ITGA7;nc|ENSG00000135424|Q13683|ITGA7	39.252832667884924	0.27938773122138094	5				NaN	NaN	0	NaN	6619	3923	10537
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10555	30.852	NaN	4647.3	30	0	1654.6	0.215	+			49628	VYIDKVRSL	9	46	364.88535853722055	1091.6342462118616	3	365.2197570800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYIDKVRSL_	ENSG00000113368|ENST00000261366|LMNB1;LMNB1|p.Q183Tfs*5|1|0.35|ENSG00000113368|chr5:126805594-126805595|-/A|frameshift_variant	47.95952297671804	0.32689736945648856	5				NaN	NaN	0	NaN	6627	3926	10554
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10556	30.856	NaN	1583.3	30	0	113.44	0.106			+	8390	EANELQGRI	9	58	515.2686798381706	1028.522806743141	2	515.2691040039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EANELQGRI_	REV__ENSG00000011295|ENST00000261647|TTC19;REV__ENST00000475723.5_1_17:15903657-15930833:+|nuORF;REV__ENST00000497842.6_1_17:15903346-15927855:+|nuORF	47.657333605630114	0.33044192980041115	5				NaN	NaN	0	NaN	6628	3926	10554
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10557	30.858	NaN	1022.5	30	0	71.495	0.106	+			13279	GIVSTPVPK	9	43	449.273825421189	NaN	0	449.2736511230469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GIVSTPVPK_	ENST00000438210.1_1_1:40428398-40429073:+|nuORF	45.97224482568171	0.23445038899310136	5				NaN	NaN	0	NaN	6629	3926	10554
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10558	30.86	NaN	1678.8	30	0	163.01	0.034	+			2416	APAPSTVHF	9	50	463.7391301772078	925.4637074212156	2	463.73895263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_APAPSTVHF_	ENSG00000155090|ENST00000285407|KLF10;nc|ENSG00000155090|Q13118-2|KLF10	68.484700416344	0.1473408039581241	5				NaN	NaN	0	NaN	6630	3926	10554
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10570	30.885	NaN	3096.4	30	0	615.83	0.215	+			35023	SACSFTFSK	9	68	517.7341688786264	1033.4537848240527	2	517.734619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SAC(Carbamidomethyl (C))SFTFSK_	ENSG00000131375|ENST00000253693|CAPN7;ENST00000443567.5_1_3:15282348-15292515:+|nuORF	54.722347961057174	0.257609425301511	5				NaN	NaN	0	NaN	6639	3929	10569
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10571	30.889	NaN	2253.5	30	0	189.2	0.106	+			27036	LYVNTQGLD	9	64	511.76336245524766	1021.5121719772953	2	511.7628173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LYVNTQGLD_	ENSG00000129946|ENST00000264554|SHC2;SHC2|p.A422T|2|0.36|ENSG00000129946|chr19:425142-425142|C/T|missense_variant	58.78195531508484	0.22376836668196862	5				NaN	NaN	0	NaN	6640	3929	10569
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10572	30.891	NaN	3149.4	30	0	1050.7	0.106	+			18336	IPVTKGVVP	9	52	455.29179093880725	908.5690289444145	2	455.29180908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IPVTKGVVP_	ENSG00000111727|ENST00000229330|HCFC2;HCFC2|p.A339Hfs*2|1|0.43|ENSG00000111727|chr12:104082847-104082847|A/-|frameshift_variant;HCFC2|p.N309Ifs*32|4|0.23|ENSG00000111727|chr12:104082757-104082757|A/-|frameshift_variant;nc|ENSG00000111727|Q9Y5Z7-2|HCFC2	35.61828744233558	0.47037581924408073	5				NaN	NaN	0	NaN	6641	3929	10569
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10573	30.892	NaN	1696.1	30	0	176.15	0.106	+			9801	EPAVTEPGLGP	11	54	533.7763065279979	NaN	0	533.7759399414062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EPAVTEPGLGP_	ENSG00000178028|ENST00000372289|DMAP1;ENST00000494092.1_1_1:44685134-44686104:+|nuORF	32.81241826257853	0.4191849651971536	5				NaN	NaN	0	NaN	6642	3929	10569
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10574	30.894	NaN	2147.6	30	0	300.72	0.106	+			44001	TPIASAASI	9	49	415.73469015712146	829.454827381043	2	415.734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TPIASAASI_	ENSG00000185591|ENST00000327443|SP1;nc|ENSG00000185591|P08047-2|SP1;nc|ENSG00000185591|P08047-3|SP1;SP1|p.A513V|1|0.48|ENSG00000185591|chr12:53383485-53383485|C/T|missense_variant	63.30626980617807	0.18605348971131092	5				NaN	NaN	0	NaN	6643	3929	10569
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10575	30.896	NaN	2170.2	30	0	169.04	0.106				-1	LSPLQSMAAQ	10	68	531.267167660499	NaN	0	531.2671508789062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_LSPLQSM(Oxidation (M))AAQ_	ENSG00000179950|ENST00000526683|PUF60;nc|ENSG00000179950|Q9UHX1-3|PUF60;nc|ENSG00000179950|Q9UHX1-5|PUF60;PUF60|p.G197Afs*12|1|0.08|ENSG00000179950|chr8:143818206-143818206|C/-|frameshift_variant	37.81151784470057	0.3760215235790741	5				NaN	NaN	0	NaN	6644	3929	10569
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10576	30.898	NaN	795.63	30	0	46.896	0.033			+	43354	TGDKFLKG	8	45	433.2421875	NaN	0	433.2421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TGDKFLKG_	REV__CFAP47|p.F1567Vfs*4|1|0.31|ENSG00000165164|chrX:36098829-36098830|-/G|frameshift_variant;REV__CFAP47|p.H2345Afs*15|1|0.09|ENSG00000165164|chrX:36236809-36236810|-/A|frameshift_variant;REV__CFAP47|p.P2326Tfs*34|1|0.26|ENSG00000165164|chrX:36236751-36236752|-/A|frameshift_variant;REV__ENSG00000165164|ENST00000378653|CFAP47;REV__nc|ENSG00000165164|Q6ZTR5-6|CFAP47	35.61828744233558	1.7418937515398478	5				NaN	NaN	0	NaN	6645	3929	10569
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10589	30.925	NaN	20092	30	0	2698.8	0.214	+			2494	APSKTSLIM	9	78	474.265094050049	946.515635166898	2	474.2647399902344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_APSKTSLIM_	ENSG00000114861|ENST00000649528|FOXP1;nc|ENSG00000285708|Q9H334-3|FOXP1;nc|ENSG00000285708|Q9H334-4|FOXP1;nc|ENSG00000285708|Q9H334-6|FOXP1;nc|ENSG00000285708|Q9H334-7|FOXP1;nc|ENSG00000285708|Q9H334-8|FOXP1	58.78195531508484	0.22376836668196862	5				NaN	NaN	0	NaN	6655	3932	10588
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10590	30.929	NaN	5848.1	30	0	920.65	0.106	+			45558	TYLFPWQI	8	69	534.2811879418219	1066.5478229504438	2	534.28173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TYLFPWQI_	ENST00000527252.1_1_11:103339262-103349978:+|nuORF	35.61828744233558	0.6843154725607303	5				NaN	NaN	0	NaN	6656	3932	10588
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10591	30.931	NaN	1676.3	30	0	177.7	0.106	+			18681	ITAPPSRVL	9	49	477.29246531487354	952.5703776965471	2	477.29241943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ITAPPSRVL_	ENSG00000099194|ENST00000370355|SCD	47.657333605630114	0.33044192980041115	5				NaN	NaN	0	NaN	6657	3932	10588
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10592	30.932	NaN	3366.1	30	0	658.1	0.106			+	-1	KYQVMQLTI	9	50	380.5434757430321	1138.6085978292963	3	380.54376220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_KYQVM(Oxidation (M))QLTI_	REV__ENSG00000139289|ENST00000266671|PHLDA1	34.172542307311794	0.4838870758800184	5				NaN	NaN	0	NaN	6658	3932	10588
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10593	30.934	NaN	1528	30	0	273.39	0.106			+	48326	VTFTDCIVR	9	61	527.2718265192974	1052.5291001053947	2	527.2719116210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTFTDCIVR_	REV__ENSG00000146166|ENST00000370657|LGSN;REV__LGSN|p.K343Nfs*7|1|0.18|ENSG00000146166|chr6:63280522-63280522|T/-|frameshift_variant;REV__LGSN|p.Q336Ifs*15|1|0.05|ENSG00000146166|chr6:63280545-63280546|-/AT|frameshift_variant;REV__nc|ENSG00000146166|Q5TDP6-2|LGSN	36.446750945000026	0.4619375763483977	5				NaN	NaN	0	NaN	6659	3932	10588
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10594	30.936	NaN	2596.7	30	0	871.06	0.035			+	31501	QLELEREK	8	61	522.7887033398896	1043.562853746579	2	523.2906494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QLELEREK_	REV__ENSG00000197694|ENST00000372739|SPTAN1;REV__nc|ENSG00000160299|O95613-2|PCNT;REV__nc|ENSG00000197694|Q13813-3|SPTAN1;REV__nc|ENSG00000197694|Q13813|SPTAN1	54.722347961057174	0.5540294759312786	5				NaN	NaN	0	NaN	6660	3932	10588
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10595	30.937	NaN	1218.4	30	0	100.57	0.139	+			42506	TAPGIALPR	9	56	448.27162124105973	894.5286895489195	2	448.7735900878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TAPGIALPR_	ENST00000379672.9_2_17:12692889-12693084:+|nuORF	27.882242232435846	0.5426732730940306	5				NaN	NaN	0	NaN	6661	3932	10588
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10609	30.968	NaN	21787	30	0	3802.4	0.214	+			28073	NADPQAVTM	9	77	473.7183125307306	945.4220721282612	2	473.71826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NADPQAVTM_	ENSG00000102316|ENST00000375068|MAGED2;nc|ENSG00000102316|Q9UNF1-2|MAGED2	78.26377905018397	0.10505600812668463	5				NaN	NaN	0	NaN	6672	3935	10608
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10610	30.971	NaN	25210	30	0	3222	0.106	+			3766	ATAELIMSR	9	77	496.26534776233086	990.5161425914617	2	496.2654113769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATAELIMSR_	ENSG00000105677|ENST00000222284|TMEM147;ENST00000477168.6_1_19:36036641-36037810:+|nuORF;ENST00000595467.1_1_19:36037522-36037810:+|nuORF;nc|ENSG00000105677|Q9BVK8-2|TMEM147	204.624747049445	1.3753862112523631E-05	5				NaN	NaN	0	NaN	6673	3935	10608
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10611	30.973	NaN	6679.2	30	0	973.03	0.106			+	18969	IVRGQRHR	8	74	511.3100736438224	1020.6055943544449	2	511.31036376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IVRGQRHR_	REV__ENSG00000205269|ENST00000379426|TMEM170B	40.5726180659479	0.6527593143185008	5				NaN	NaN	0	NaN	6674	3935	10608
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10612	30.975	NaN	1566.3	30	0	124.71	0.106	+			21335	KLTYIYIQK	9	71	585.3501150717309	1168.6856772102617	2	585.3505249023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KLTYIYIQK_	ENST00000383746.7_2_3:44396236-44396287:+|nuORF	85.86182877749512	0.07653218437724067	5				NaN	NaN	0	NaN	6675	3935	10608
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10613	30.977	NaN	1411.6	30	0	92.723	0.106				-1	ITAVTQCY	8	59	478.23133998648586	954.4481270397717	2	478.2308349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_ITAVTQC(Carbamidomethyl (C))Y_	ENSG00000277481|ENST00000620267|PKD1L3	53.351449002276354	0.5676011784961348	5				NaN	NaN	0	NaN	6676	3935	10608
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10614	30.979	NaN	2109.8	30	0	171.05	0.034	+			7685	DLHGFSSSL	9	60	481.73268735137566	961.4508217695513	2	481.7327880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DLHGFSSSL_	ENSG00000196468|ENST00000439435|FGF16;FGF16|p.L187Ffs*9|1|0.24|ENSG00000196468|chrX:77456453-77456454|-/T|frameshift_variant;FGF16|p.R172Gfs*20|1|0.33|ENSG00000196468|chrX:77456409-77456409|C/-|frameshift_variant	42.396135135203025	0.392153681582562	5				NaN	NaN	0	NaN	6677	3935	10608
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10615	30.979	NaN	1782.4	30	0	141.31	0.141	+			50437	YACEVTHQGL	10	60	560.7583454721005	1119.5021380110009	2	560.7587280273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YACEVTHQGL_	nc|ENSG00000211592|P01834|IGKC	74.25504064058377	0.24255678544297835	5				NaN	NaN	0	NaN	6678	3935	10608
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10631	31.014	NaN	2689.2	30	0	562.79	0.214	+			48559	VTPPGRLSSP	10	55	505.7852359127523	1009.5559188923046	2	505.78485107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTPPGRLSSP_	ENST00000488090.1_1_10:101128283-101137029:+|nuORF	29.170058357718403	0.6416167986984785	5				NaN	NaN	0	NaN	6691	3938	10630
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10632	31.017	NaN	1800.8	30	0	178.22	0.106			+	8252	EAFVKNIGV	9	55	488.7776521705442	975.5407514078884	2	488.77703857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EAFVKNIGV_	REV__ENSG00000123191|ENST00000242839|ATP7B;REV__nc|ENSG00000123191|P35670-2|ATP7B;REV__nc|ENSG00000123191|P35670-3|ATP7B;REV__nc|ENSG00000123191|P35670-4|ATP7B	51.33545320467046	0.2872990594074956	5				NaN	NaN	0	NaN	6692	3938	10630
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10633	31.019	NaN	1194	30	0	72.924	0.106	+			20527	KFIDTTSKF	9	61	543.7946916561654	1085.5748303791306	2	543.795166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KFIDTTSKF_	ENSG00000100316|ENST00000216146|RPL3;ENSG00000140986|ENST00000268661|RPL3L;ENST00000417615.1_1_14:99439218-99439536:-|nuORF;ENST00000473638.5_1_22:39708982-39709710:-|nuORF	76.16968421966216	0.11411088698345859	5				NaN	NaN	0	NaN	6693	3938	10630
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10634	31.021	NaN	5762.8	30	0	2143.5	0.106	+			37098	SISPLDPALG	10	53	485.26616170793193	968.5177704826639	2	485.26556396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SISPLDPALG_	ABLIM3|p.P284Lfs*94|1|0.62|ENSG00000173210|chr5:149233259-149233259|C/-|frameshift_variant	44.116797842482775	0.5112108506279902	5				NaN	NaN	0	NaN	6694	3938	10630
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10635	31.023	NaN	1355.5	30	0	651.66	0.106			+	26431	LTGPGGEL	8	34	372.2016364495911	742.3887199659822	2	372.2011413574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LTGPGGEL_	REV__ENSG00000142185|ENST00000397928|TRPM2;REV__nc|ENSG00000142185|O94759-2|TRPM2;REV__nc|ENSG00000142185|O94759-3|TRPM2;REV__TRPM2|p.A785Rfs*17|1|0.49|ENSG00000142185|chr21:44401707-44401707|C/-|frameshift_variant;REV__TRPM2|p.V508Cfs*3|1|0.06|ENSG00000142185|chr21:44391350-44391350|G/-|frameshift_variant	20.481830146152948	0.8005983782650069	5				NaN	NaN	0	NaN	6695	3938	10630
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10636	31.025	NaN	1238.7	30	0	157.78	0.035	+			6814	CGVIDTFEN	9	51	499.2183541539059	NaN	0	499.2181701660156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_CGVIDTFEN_	ENST00000326291.10_1_13:73356367-73357596:+|nuORF	51.33545320467046	0.19748963086191895	5				NaN	NaN	0	NaN	6696	3938	10630
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10637	31.025	NaN	893.78	30	0	143.18	0.138	+			24509	LGKDITPI	8	41	428.76027435803195	855.5059957828639	2	428.7596740722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LGKDITPI_	ENSG00000174808|ENST00000395743|BTC	57.81127852772723	0.5234495074909924	5				NaN	NaN	0	NaN	6697	3938	10630
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10649	31.052	NaN	3309.7	30	0	623.83	0.215	+			7216	DAISKTYSY	9	66	524.2533311188314	1046.4921093044627	2	524.25390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DAISKTYSY_	ENSG00000140988|ENST00000343262|RPS2;ENST00000397318.4_1_X:40794237-40794825:-|nuORF;ENST00000438210.1_1_1:40428398-40429073:+|nuORF;ENST00000441047.1_1_17:51834352-51834658:-|nuORF;ENST00000443417.1_1_9:102879039-102879699:-|nuORF;ENST00000475555.1_1_4:144270430-144270667:-|nuORF;ENST00000494359.1_1_11:17250107-17250695:+|nuORF;ENST00000529806.5_1_16:2012098-2012518:-|nuORF;ENST00000532746.5_2_16:2012101-2013785:-|nuORF;ENST00000533872.5_1_16:2012101-2013018:-|nuORF;RPL18-RPS2|1|fusion	98.58198989935565	0.04066992115528678	5				NaN	NaN	0	NaN	6706	3941	10648
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10650	31.056	NaN	1995.2	30	0	328.37	0.106	+			31804	QPMNPTQNM	9	62	530.7310952138348	1059.4476374944695	2	530.7313232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QPMNPTQNM_	ENSG00000135387|ENST00000341394|CAPRIN1;nc|ENSG00000135387|Q14444-2|CAPRIN1	41.42661286455405	0.403525789677298	5				NaN	NaN	0	NaN	6707	3941	10648
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10651	31.058	NaN	1855.1	30	0	240.1	0.106	+			12071	GAAGRPLEL	9	44	442.25350549914066	882.4924580650813	2	442.2532958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GAAGRPLEL_	ENSG00000120802|ENST00000556029|TMPO;nc|ENSG00000120802|P42167-2|TMPO;TMPO|p.L427Cfs*13|1|0.4|ENSG00000120802|chr12:98547767-98547767|T/-|frameshift_variant;TMPO|p.L427Ffs*18|1|0.28|ENSG00000120802|chr12:98547766-98547767|-/T|frameshift_variant;TMPO|p.R409Tfs*36|1|0.06|ENSG00000120802|chr12:98547707-98547708|-/A|frameshift_variant	30.317721548370564	0.5199124245378496	5				NaN	NaN	0	NaN	6708	3941	10648
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10652	31.06	NaN	6113.7	30	0	1934.7	0.106	+			4440	ATILAGDIKVK	11	50	376.9044742967947	1127.6915934905842	3	376.904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATILAGDIKVK_	ENSG00000170604|ENST00000302165|IRF2BP1	56.632244143249146	0.3535169766007185	5				NaN	NaN	0	NaN	6709	3941	10648
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10653	31.061	NaN	1257.2	30	0	227.48	0.106			+	-1	FLRSFESCF	9	61	596.778239635602	NaN	0	596.7785034179688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_FLRSFESC(Carbamidomethyl (C))F_	REV__ENST00000359142.7_1_12:89983762-89983933:-|nuORF	27.882242232435846	0.3367954786602879	5				NaN	NaN	0	NaN	6710	3941	10648
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10654	31.063	NaN	1118.1	30	0	84.447	0.036				-1	MSWTPAETN	9	57	526.721702368313	NaN	0	526.7223510742188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_M(Oxidation (M))SWTPAETN_	ENSG00000120458|ENST00000374979|MSANTD2;nc|ENSG00000120458|Q6P1R3-3|MSANTD2	39.252832667884924	0.27938773122138094	5				NaN	NaN	0	NaN	6711	3941	10648
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10655	31.064	NaN	820.7	30	0	53.225	0.139			+	7682	DLGLRSVV	8	41	429.7554931640625	NaN	0	429.7554931640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DLGLRSVV_	REV__ENSG00000160282|ENST00000397746|FTCD;REV__nc|ENSG00000160282|O95954-2|FTCD;REV__nc|ENSG00000160282|O95954-3|FTCD	35.61828744233558	1.7418937515398478	5				NaN	NaN	0	NaN	6712	3941	10648
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10666	31.091	NaN	5756	30	0	858.72	0.214	+			4656	ATLQEALAH	9	66	477.25610787735815	952.4976628215163	2	477.25579833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATLQEALAH_	ENSG00000137497|ENST00000393695|NUMA1;nc|ENSG00000137497|Q14980-2|NUMA1;nc|ENSG00000137497|Q14980-3|NUMA1;nc|ENSG00000137497|Q14980-4|NUMA1;NUMA1|p.K1766Rfs*2|1|0.39|ENSG00000137497|chr11:72007357-72007357|G/-|frameshift_variant;NUMA1|p.L1786Pfs*18|1|0.23|ENSG00000137497|chr11:72007295-72007296|-/G|frameshift_variant	136.26810882979174	0.012230845423532208	5				NaN	NaN	0	NaN	6720	3944	10665
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10667	31.094	NaN	1289.4	30	0	167.95	0.106	+			44074	TPSSYPYGAL	10	53	528.2556348778452	1054.4967168224903	2	528.2571411132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TPSSYPYGAL_	ENSG00000179094|ENST00000317276|PER1;PER1|p.A962Pfs*160|1|0.38|ENSG00000179094|chr17:8143454-8143454|C/-|frameshift_variant;PER1|p.P929Q|1|0.23|ENSG00000179094|chr17:8143552-8143552|G/T|missense_variant	30.503639358989545	0.6307262373768582	5				NaN	NaN	0	NaN	6721	3944	10665
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10668	31.096	NaN	2662.3	30	0	202.82	0.106	+			8541	EAVKLCDSY	9	56	542.7523430175156	1083.4901331018311	2	542.7534790039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_EAVKLC(Carbamidomethyl (C))DSY_	ENSG00000125944|ENST00000302271|HNRNPR;HNRNPR|p.L367Qfs*19|1|0.05|ENSG00000125944|chr1:23313620-23313621|-/TTTAATCTCT|frameshift_variant;HNRNPR|p.W594Gfs*15|1|0.23|ENSG00000125944|chr1:23310575-23310576|CA/-|frameshift_variant;nc|ENSG00000125944|O43390-2|HNRNPR;nc|ENSG00000125944|O43390-3|HNRNPR;nc|ENSG00000125944|O43390-4|HNRNPR	87.75429964447693	0.0711966946989736	5				NaN	NaN	0	NaN	6722	3944	10665
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10669	31.098	NaN	2615.5	30	0	322.74	0.036	+			28309	NEFEATQKL	9	63	540.2720634966254	1078.5295740600507	2	540.2725219726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NEFEATQKL_	ENSG00000165030|ENST00000297689|NFIL3	81.52500206392136	0.09095445986635249	5				NaN	NaN	0	NaN	6723	3944	10665
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10682	31.126	NaN	1324	30	0	235.92	0.213			+	-1	QLCLPQFFF	9	49	600.2991532461909	NaN	0	600.2991333007812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_QLC(Carbamidomethyl (C))LPQFFF_	REV__ZBED9|p.S934Qfs*17|1|0.4|ENSG00000232040|chr6:28573089-28573089|A/-|frameshift_variant	24.20275056022122	0.35506675290109213	5				NaN	NaN	0	NaN	6733	3947	10681
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10683	31.129	NaN	1388.4	30	0	149.37	0.106	+			531	ADALLLIAGG	10	46	457.27090765595	912.5272623787	2	457.271240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ADALLLIAGG_	SLC39A12|p.P91A|1|0.07|ENSG00000148482|chr10:17961590-17961590|C/G|missense_variant	29.14955571784316	0.6417842315402807	5				NaN	NaN	0	NaN	6734	3947	10681
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10684	31.131	NaN	1019.6	30	0	166.09	0.036			+	21604	KPLAALACSPC	11	55	537.2795064512094	NaN	0	537.27978515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KPLAALACSPC_	REV__ENSG00000122641|ENST00000242208|INHBA	36.446750945000026	0.40298828388271424	5				NaN	NaN	0	NaN	6735	3947	10681
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10694	31.154	NaN	2746.5	30	0	474.59	0.214			+	1639	AGPEPGATAL	10	49	442.22948514112875	882.4444173490575	2	442.2293701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AGPEPGATAL_	REV__ENSG00000069702|ENST00000212355|TGFBR3;REV__nc|ENSG00000069702|Q03167-2|TGFBR3;REV__TGFBR3|p.K277Sfs*6|1|0.3|ENSG00000069702|chr1:91727714-91727714|T/-|frameshift_variant	34.172542307311794	0.6007644933930345	5				NaN	NaN	0	NaN	6742	3950	10693
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10695	31.158	NaN	2746.5	30	0	610.06	0.106	+			33402	RIEQMEEVR	9	68	595.3036368296214	1188.5927207260427	2	595.3035888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RIEQMEEVR_	ENSG00000010322|ENST00000345716|NISCH;ENST00000489895.5_1_3:52512001-52514911:+|nuORF;nc|ENSG00000010322|Q9Y2I1-3|NISCH;nc|ENSG00000010322|Q9Y2I1-4|NISCH;NISCH|p.T1019Rfs*140|1|0.14|ENSG00000010322|chr3:52488539-52488539|C/-|frameshift_variant	40.77816245573522	0.41113185337114944	5				NaN	NaN	0	NaN	6743	3950	10693
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10696	31.16	NaN	1751.1	30	0	376.55	0.036			+	22832	KVGQPPPPPMA	11	53	559.8032858878654	1117.5920188425307	2	559.8037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KVGQPPPPPMA_	REV__ENSG00000164754|ENST00000297338|RAD21;REV__ENST00000523986.5_1_8:117864120-117864294:-|nuORF	32.81241826257853	0.645615689454792	5				NaN	NaN	0	NaN	6744	3950	10693
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10708	31.185	NaN	14906	30	0	5803	0.215			+	2781	ARQGFLLTSK	10	50	374.22059711676684	1119.6399619505005	3	374.2203369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ARQGFLLTSK_	REV__ENSG00000170759|ENST00000302418|KIF5B;REV__KIF5B|p.K323N|1|0.26|ENSG00000170759|chr10:32034832-32034832|T/G|missense_variant;REV__KIF5B|p.M622Wfs*8|1|0.15|ENSG00000170759|chr10:32022898-32022898|T/-|frameshift_variant	20.94693142431847	0.7087701759873708	5				NaN	NaN	0	NaN	6753	3953	10707
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10709	31.189	NaN	3389.2	30	0	668.39	0.106	+			33558	RLFVGSIPK	9	63	508.8161179264562	1015.6176829197124	2	508.8160095214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RLFVGSIPK_	ENSG00000125944|ENST00000302271|HNRNPR;ENSG00000135316|ENST00000369622|SYNCRIP;HNRNPR|p.L367Qfs*19|1|0.05|ENSG00000125944|chr1:23313620-23313621|-/TTTAATCTCT|frameshift_variant;HNRNPR|p.W594Gfs*15|1|0.23|ENSG00000125944|chr1:23310575-23310576|CA/-|frameshift_variant;nc|ENSG00000125944|O43390-2|HNRNPR;nc|ENSG00000125944|O43390-3|HNRNPR;nc|ENSG00000125944|O43390-4|HNRNPR;nc|ENSG00000271793|O60506-2|SYNCRIP;nc|ENSG00000271793|O60506-3|SYNCRIP;nc|ENSG00000271793|O60506-4|SYNCRIP;nc|ENSG00000271793|O60506-5|SYNCRIP	56.72105179125745	0.24094814563026265	5				NaN	NaN	0	NaN	6754	3953	10707
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10710	31.191	NaN	5267.7	30	0	878.28	0.106	+			50400	YAAGVHSVL	9	60	458.7477959107888	915.4810388883776	2	458.747802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YAAGVHSVL_	AP5Z1|p.Q696Rfs*6|3|0.43|ENSG00000242802|chr7:4790814-4790814|C/-|frameshift_variant;ENSG00000242802|ENST00000649063|AP5Z1;ENST00000490487.1_1_7:4829477-4830874:+|nuORF	92.19062340807069	0.05868925795948219	5				NaN	NaN	0	NaN	6755	3953	10707
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10711	31.193	NaN	1754.1	30	0	117.41	0.106				-1	AGLCAGQCILK	11	48	397.53924821761694	NaN	0	397.2044677734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_AGLC(Carbamidomethyl (C))AGQC(Carbamidomethyl (C))ILK_	ENSG00000124126|ENST00000371941|PREX1;nc|ENSG00000124126|Q8TCU6-2|PREX1;nc|ENSG00000124126|Q8TCU6-3|PREX1;PREX1|p.L957Pfs*50|1|0.25|ENSG00000124126|chr20:48650154-48650155|-/G|frameshift_variant	31.634271133179894	0.4244354679066847	5				NaN	NaN	0	NaN	6756	3953	10707
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10712	31.195	NaN	1442.4	30	0	150.32	0.033			+	38002	SPLGARQY	8	52	446.23927644422224	NaN	0	446.238525390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SPLGARQY_	REV__ENSG00000184560|ENST00000333870|SPEM2	37.15910966729921	1.7418937515398478	5				NaN	NaN	0	NaN	6757	3953	10707
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10723	31.22	NaN	3648.5	30	0	361.68	0.215	+			12790	GELTGEVRM	9	61	496.2475751514051	990.4805973696102	2	496.2477111816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GELTGEVRM_	ENSG00000128591|ENST00000325888|FLNC;FLNC|p.H2471Tfs*58|1|0.18|ENSG00000128591|chr7:128856767-128856767|C/-|frameshift_variant;FLNC|p.V1896Wfs*57|1|0.04|ENSG00000128591|chr7:128851472-128851472|G/-|frameshift_variant;nc|ENSG00000128591|Q14315-2|FLNC	65.46538089061403	0.16805504838372562	5				NaN	NaN	0	NaN	6765	3956	10722
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10724	31.223	NaN	2512.1	30	0	341.26	0.106				-1	ASCQYSLLK	9	61	535.2710963700843	1068.5276398069684	2	535.271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_ASC(Carbamidomethyl (C))QYSLLK_	ENSG00000100731|ENST00000304743|PCNX1;ENSG00000135749|ENST00000258229|PCNX2;ENSG00000197136|ENST00000355703|PCNX3;ENST00000324142.4_1_1:233337898-233388268:-|nuORF;ENST00000475463.6_1_1:233201380-233353905:-|nuORF;ENST00000519530.1_1_1:233353734-233362997:-|nuORF;nc|ENSG00000100731|Q96RV3-3|PCNX1;nc|ENSG00000100731|Q96RV3-4|PCNX1;nc|ENSG00000135749|A6NKB5-2|PCNX2;nc|ENSG00000135749|A6NKB5-5|PCNX2;nc|ENSG00000197136|Q9H6A9-2|PCNX3	46.45678178249821	0.34452392205506005	5				NaN	NaN	0	NaN	6766	3956	10722
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10725	31.225	NaN	1224.6	30	0	178.41	0.033			+	26186	LSRQAGVK	8	35	429.7621154785156	NaN	0	429.7621154785156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSRQAGVK_	REV__ENSG00000142606|ENST00000378412|MMEL1;REV__nc|ENSG00000142606|Q495T6-2|MMEL1;REV__nc|ENSG00000142606|Q495T6-3|MMEL1	11.511019455917149	1.7418937515398478	5				NaN	NaN	0	NaN	6767	3956	10722
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10738	31.252	NaN	4448.2	30	0	2106.5	0.215			+	48119	VSVDALNEI	9	53	480.2557889308884	958.4970249285768	2	480.2557678222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSVDALNEI_	REV__ENST00000416785.1_1_6:28699967-28700618:+|nuORF	47.657333605630114	0.33044192980041115	5				NaN	NaN	0	NaN	6777	3959	10737
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10739	31.256	NaN	4155	30	0	1771.5	0.106				-1	 	0	41	336.1910775691609	670.3676022051218	2	336.1910400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6778	3959	10737
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10740	31.258	NaN	3038.9	30	0	263.84	0.106	+			16111	HDLVIKSL	8	57	462.7789540874005	923.543355241601	2	462.7793273925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HDLVIKSL_	ENSG00000100342|ENST00000397278|APOL1;nc|ENSG00000100342|O14791-2|APOL1;nc|ENSG00000100342|O14791-3|APOL1	69.6276240434122	0.4100012001731381	5				NaN	NaN	0	NaN	6779	3959	10737
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10741	31.26	NaN	3014.1	30	0	202.48	0.106			+	51123	YMVLFLVF	8	67	516.2861741566456	1030.5577953800912	2	516.789306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YMVLFLVF_	REV__ENSG00000213215|ENST00000641412|OR2F1;REV__OR2F1|p.A300Pfs*12|1|0.43|ENSG00000213215|chr7:143960864-143960864|G/-|frameshift_variant;REV__OR2F1|p.R170Tfs*8|1|0.16|ENSG00000213215|chr7:143960478-143960479|-/CGTCAAG|frameshift_variant	43.626045697637714	0.6338121648150432	5				NaN	NaN	0	NaN	6780	3959	10737
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10742	31.262	NaN	3404.9	30	0	654.74	0.036	+			14376	GTAGNGWFNK	10	59	526.2510091706642	1050.4874654081284	2	526.2520141601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTAGNGWFNK_	ENST00000525241.1_1_11:35211476-35226207:+|nuORF;ENST00000534296.5_1_11:35211476-35226207:+|nuORF	112.41091882917199	0.040839805697094264	5				NaN	NaN	0	NaN	6781	3959	10737
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10751	31.282	NaN	3644.2	30	0	663.96	0.214	+			47940	VSMDYAISK	9	61	507.25190103384494	1012.4892491344899	2	507.2520446777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSMDYAISK_	ENSG00000196453|ENST00000247930|ZNF777;ZNF777|p.P504Rfs*5|1|0.44|ENSG00000196453|chr7:149432761-149432761|G/-|frameshift_variant	114.8945686534367	0.024290463251177924	5				NaN	NaN	0	NaN	6787	3962	10750
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10752	31.285	NaN	4690.6	30	0	321.77	0.106	+			46378	VELAESRAL	9	61	494.27696738616805	986.5393818391361	2	494.27728271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VELAESRAL_	ENST00000340533.8_2_18:71959085-71959217:-|nuORF	78.26377905018397	0.10505600812668463	5				NaN	NaN	0	NaN	6788	3962	10750
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10753	31.287	NaN	3569.4	30	0	582.08	0.106	+			44965	TVCDLIQSK	9	64	532.2761563647942	1062.5377597963884	2	532.2760009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_TVC(Carbamidomethyl (C))DLIQSK_	ENSG00000030582|ENST00000053867|GRN;ENST00000585348.1_1_17:42428425-42428671:+|nuORF;nc|ENSG00000030582|P28799-2|GRN	98.58198989935565	0.04066992115528678	5				NaN	NaN	0	NaN	6789	3962	10750
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10754	31.289	NaN	2159.8	30	0	506.78	0.106	+			3281	ASLPPTKK	8	52	421.2605623049886	NaN	0	421.26025390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASLPPTKK_	ENSG00000166268|ENST00000552032|MYRFL;ENSG00000186409|ENST00000657597|CCDC30;nc|ENSG00000186409|Q5VVM6-2|CCDC30;nc|ENSG00000186409|Q5VVM6|CCDC30	35.61828744233558	1.7418937515398478	5				NaN	NaN	0	NaN	6790	3962	10750
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10755	31.291	NaN	1508	30	0	165.45	0.106	+			183	AALALAVLAP	10	54	455.29179093880725	908.5690289444145	2	455.2915954589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AALALAVLAP_	ARSK|p.N262Tfs*39|1|0.4|ENSG00000164291|chr5:95586642-95586642|A/-|frameshift_variant;ENSG00000164291|ENST00000380009|ARSK	26.79610172149135	0.6610034878437611	5				NaN	NaN	0	NaN	6791	3962	10750
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10756	31.293	NaN	1859.5	30	0	229.06	0.036	+			17774	IESSPQYRL	9	66	546.7882784896286	NaN	0	546.787841796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IESSPQYRL_	ATXN2L|p.P636Rfs*19|1|0.48|ENSG00000168488|chr16:28833301-28833301|C/-|frameshift_variant;ATXN2L|p.Q1002Kfs*50|2|0.29|ENSG00000168488|chr16:28836029-28836029|G/-|frameshift_variant;ATXN2L|p.T504Hfs*33|1|0.12|ENSG00000168488|chr16:28832387-28832388|-/C|frameshift_variant;ENSG00000168488|ENST00000336783|ATXN2L;ENST00000563314.5_1_16:28834580-28846939:+|nuORF;ENST00000564284.1_1_16:28841101-28842119:+|nuORF;ENST00000570284.1_1_16:28840745-28842349:+|nuORF;nc|ENSG00000168488|Q8WWM7-2|ATXN2L;nc|ENSG00000168488|Q8WWM7-3|ATXN2L;nc|ENSG00000168488|Q8WWM7-4|ATXN2L;nc|ENSG00000168488|Q8WWM7-5|ATXN2L;nc|ENSG00000168488|Q8WWM7-6|ATXN2L;nc|ENSG00000168488|Q8WWM7-7|ATXN2L;nc|ENSG00000168488|Q8WWM7-8|ATXN2L;nc|ENSG00000168488|Q8WWM7-9|ATXN2L	65.15724298150197	0.1273232316122292	5				NaN	NaN	0	NaN	6792	3962	10750
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10774	31.329	NaN	2655.6	30	0	155.59	0.214			+	26640	LVDDETVKL	9	60	516.2861741566456	1030.5577953800912	2	516.284423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LVDDETVKL_	REV__nc|ENSG00000164398|Q9UKU0-5|ACSL6	45.97224482568171	0.3502073465782774	5				NaN	NaN	0	NaN	6807	3965	10773
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10775	31.333	NaN	1962.3	30	0	357.03	0.106	+			38538	SSDSGSGFWK	10	54	529.2326698598457	1056.4507867864913	2	529.232177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSDSGSGFWK_	ENSG00000126709|ENST00000361157|IFI6;nc|ENSG00000126709|P09912-2|IFI6;nc|ENSG00000126709|P09912-3|IFI6	104.01359247289065	0.06577755598965461	5				NaN	NaN	0	NaN	6808	3965	10773
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10776	31.335	NaN	4133.6	30	0	2013.1	0.032			+	10489	EVSDPPIA	8	53	414.21065138796405	826.4067498427281	2	414.2106018066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EVSDPPIA_	REV__AKAP12|p.E1404Rfs*18|1|0.17|ENSG00000131016|chr6:151352600-151352600|G/-|frameshift_variant;REV__AKAP12|p.N1461Mfs*26|1|0.52|ENSG00000131016|chr6:151352767-151352767|A/-|frameshift_variant;REV__ENSG00000131016|ENST00000402676|AKAP12;REV__nc|ENSG00000131016|Q02952-2|AKAP12;REV__nc|ENSG00000131016|Q02952-3|AKAP12	46.76643321282427	0.6143254112625767	5				NaN	NaN	0	NaN	6809	3965	10773
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10791	31.366	NaN	9790.9	30	0	1602.3	0.214	+			4252	ATGDVALLR	9	61	458.2660929811826	914.5176330291653	2	458.2662658691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATGDVALLR_	ENSG00000100605|ENST00000267615|ITPK1	158.07458414430337	0.004987072822166904	5				NaN	NaN	0	NaN	6821	3968	10790
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10792	31.37	NaN	3585	30	0	1682.9	0.106	+			15955	HAGPVINTL	9	48	461.26086775311967	920.5071825730394	2	461.260986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HAGPVINTL_	CREBBP|p.Q2411Sfs*2|1|0.24|ENSG00000005339|chr16:3727816-3727816|G/-|frameshift_variant;ENSG00000005339|ENST00000262367|CREBBP;nc|ENSG00000005339|Q92793-2|CREBBP	42.396135135203025	0.392153681582562	5				NaN	NaN	0	NaN	6822	3968	10790
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10793	31.372	NaN	3296.3	30	0	844.44	0.106	+			48936	VVEGSFVYK	9	62	514.2761962272102	1026.5378395212203	2	514.276611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVEGSFVYK_	ENSG00000203879|ENST00000447750|GDI1;ENST00000491154.1_1_X:153666748-153668487:+|nuORF;GDI1|p.G114D|1|0.12|ENSG00000203879|chrX:154439093-154439093|G/A|missense_variant	75.04331003522576	0.118981335847003	5				NaN	NaN	0	NaN	6823	3968	10790
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10794	31.374	NaN	3131.5	30	0	1207.6	0.106			+	24151	LELPDSTA	8	44	423.2158968546682	844.4172407761364	2	423.21600341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LELPDSTA_	REV__ENSG00000130816|ENST00000359526|DNMT1;REV__nc|ENSG00000130816|P26358-3|DNMT1;REV__nc|ENSG00000130816|P26358|DNMT1	65.80317337860623	0.44433089765398776	5				NaN	NaN	0	NaN	6824	3968	10790
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10795	31.376	NaN	7654.7	30	0	979.35	0.106			+	102	AADSETKKIIQ	11	73	602.3322743004383	1202.6499956676764	2	602.3326416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AADSETKKIIQ_	REV__ENSG00000186951|ENST00000407236|PPARA	82.7504851949679	0.12944296023181348	5				NaN	NaN	0	NaN	6825	3968	10790
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10796	31.377	NaN	1797.8	30	0	234.88	0.036	+			11036	FELRDSSAY	9	67	544.2563788966082	1086.4982048600164	2	544.2569580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FELRDSSAY_	DNAAF3|p.R326Afs*82|1|0.35|ENSG00000167646|chr19:55160713-55160713|C/-|frameshift_variant;ENSG00000167646|ENST00000524407|DNAAF3;nc|ENSG00000167646|Q8N9W5-3|DNAAF3;nc|ENSG00000167646|Q8N9W5-6|DNAAF3;nc|ENSG00000167646|Q8N9W5-7|DNAAF3	58.78195531508484	0.22376836668196862	5				NaN	NaN	0	NaN	6826	3968	10790
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10797	31.378	NaN	2584.1	30	0	326.16	0.139	+			35140	SAIAAVIAR	9	47	436.2715422251232	870.5285315170464	2	436.2713928222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SAIAAVIAR_	ENSG00000165949|ENST00000612813|IFI27;nc|ENSG00000165949|P40305-1|IFI27;nc|ENSG00000165949|P40305-3|IFI27;nc|ENSG00000165949|P40305-4|IFI27	87.69643885390035	0.07135982304947239	5				NaN	NaN	0	NaN	6827	3968	10790
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10813	31.413	NaN	77190	30	0	31420	0.214	+			37073	SISDKFFQK	9	76	367.1976196232181	1098.5710294698542	3	367.1975402832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SISDKFFQK_	ENSG00000089472|ENST00000343002|HEPH;HEPH|p.R1086Qfs*4|1|0.29|ENSG00000089472|chrX:66266444-66266445|-/C|frameshift_variant;nc|ENSG00000089472|Q9BQS7-2|HEPH;nc|ENSG00000089472|Q9BQS7-3|HEPH;nc|ENSG00000089472|Q9BQS7-4|HEPH	40.77816245573522	0.41113185337114944	5				NaN	NaN	0	NaN	6840	3971	10812
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10814	31.417	NaN	7468.6	30	0	5423.9	0.106				-1	 	0	47	350.2068401766087	698.3991274200174	2	350.20672607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6841	3971	10812
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10815	31.419	NaN	13228	30	0	1522.9	0.106	+			32594	QYGGYKLA	8	83	450.2345948517424	898.4546367702848	2	450.2344665527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QYGGYKLA_	chr13:43059012-43068930|126|14.91|0.21|6.12|+|1|TE_info:L1PB1,L1PB1_dup10508,L1,LINE,donor,-,43056899,43059012|None,DNAJC15|22;L1PB1_dup10508|chr13:43056899-43059152:-|2.941020511291588|0.4940460713329822|2.57|483.0|88|1|anti-sense	88.64286706044652	0.2815785716369046	5				NaN	NaN	0	NaN	6842	3971	10812
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10816	31.42	NaN	2033.2	30	0	383.83	0.106			+	14438	GTATLYKLS	9	59	477.26871669672266	952.5228804602453	2	477.2680358886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTATLYKLS_	REV__ENST00000507036.1_1_5:7867877-7868021:-|nuORF	36.446750945000026	0.4619375763483977	5				NaN	NaN	0	NaN	6843	3971	10812
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10817	31.422	NaN	3042.9	30	0	307.39	0.106			+	42269	TAAVKELLAG	10	61	486.78942764708586	971.5643023609717	2	486.7892150878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TAAVKELLAG_	REV__ENSG00000204479|ENST00000376098|PRAMEF17;REV__ENSG00000237700|ENST00000437300|PRAMEF33;REV__PRAMEF17|p.E417Gfs*22|1|0.04|ENSG00000204479|chr1:13392324-13392325|-/AG|frameshift_variant;REV__PRAMEF17|p.T389Afs*9|1|0.05|ENSG00000204479|chr1:13392241-13392242|-/GCTTGGGT|frameshift_variant	87.69643885390035	0.14426223466775756	5				NaN	NaN	0	NaN	6844	3971	10812
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10818	31.424	NaN	2394.9	30	0	246.34	0.034	+			35694	SDIQVKEL	8	49	466.25785668387806	NaN	0	466.25762939453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SDIQVKEL_	ENSG00000117632|ENST00000455785|STMN1;ENST00000465604.1_1_1:26229981-26231212:-|nuORF;nc|ENSG00000117632|P16949-2|STMN1	80.45461616416974	1.7418937515398478	5				NaN	NaN	0	NaN	6845	3971	10812
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10819	31.425	NaN	2105.2	30	0	201.69	0.14	+			51525	YVVKNVNAL	9	70	510.2975733912102	NaN	0	510.2973937988281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YVVKNVNAL_	ENSG00000172987|ENST00000370552|HPSE2;nc|ENSG00000172987|Q8WWQ2-3|HPSE2;nc|ENSG00000172987|Q8WWQ2-4|HPSE2	57.81127852772723	0.15865383123342353	5				NaN	NaN	0	NaN	6846	3971	10812
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10833	31.456	NaN	14238	30	0	1957	0.214	+			45482	TYDKGYQF	8	76	511.23505944323176	1020.4555659532635	2	511.23504638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TYDKGYQF_	ENSG00000139197|ENST00000675855|PEX5;nc|ENSG00000139197|P50542-2|PEX5;nc|ENSG00000139197|P50542-3|PEX5;nc|ENSG00000139197|P50542-4|PEX5	93.19546047674547	0.2677966331495483	5				NaN	NaN	0	NaN	6857	3974	10832
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10834	31.46	NaN	2234.8	30	0	277.5	0.106	+			37074	SISDKFFQK	9	64	550.2924827257644	1098.5704125183288	2	550.2926635742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SISDKFFQK_	ENSG00000089472|ENST00000343002|HEPH;HEPH|p.R1086Qfs*4|1|0.29|ENSG00000089472|chrX:66266444-66266445|-/C|frameshift_variant;nc|ENSG00000089472|Q9BQS7-2|HEPH;nc|ENSG00000089472|Q9BQS7-3|HEPH;nc|ENSG00000089472|Q9BQS7-4|HEPH	51.19269402634007	0.2889735674168909	5				NaN	NaN	0	NaN	6858	3974	10832
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10835	31.461	NaN	2147.1	30	0	208.88	0.106	+			7772	DPDATSLKY	9	58	505.2453622986615	1008.4761716641231	2	505.24554443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DPDATSLKY_	ENSG00000131778|ENST00000369258|CHD1L;nc|ENSG00000131778|Q86WJ1-2|CHD1L;nc|ENSG00000131778|Q86WJ1-3|CHD1L;nc|ENSG00000131778|Q86WJ1-4|CHD1L;nc|ENSG00000131778|Q86WJ1-5|CHD1L	69.6276240434122	0.14239879520340665	5				NaN	NaN	0	NaN	6859	3974	10832
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10836	31.463	NaN	2506.7	30	0	903.67	0.106	+			48560	VTPPSILP	8	44	412.2497716681314	822.4849904030629	2	412.2496032714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTPPSILP_	KRTAP10-5|p.C84Afs*285|1|0.37|ENSG00000241123|chr21:44580330-44580330|G/-|frameshift_variant	33.51558372728122	0.7005509609380386	5				NaN	NaN	0	NaN	6860	3974	10832
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10837	31.465	NaN	1302.3	30	0	127.42	0.106			+	-1	LYICMGRPL	9	59	561.7921696047105	1121.5697862762208	2	562.2945556640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_LYIC(Carbamidomethyl (C))MGRPL_	REV__ENSG00000260220|ENST00000638797|CCDC187;REV__nc|ENSG00000260220|A0A096LP49-2|CCDC187;REV__nc|ENSG00000260220|A0A096LP49|CCDC187	33.51558372728122	0.4900267029546261	5				NaN	NaN	0	NaN	6861	3974	10832
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10838	31.467	NaN	1166.8	30	0	88.292	0.035			+	22070	KSLDFVQIV	9	58	524.8060302734375	NaN	0	524.8060302734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KSLDFVQIV_	REV__ENST00000579124.5_1_18:20495424-20516752:+|nuORF	44.116797842482775	0.2472372736944149	5				NaN	NaN	0	NaN	6862	3974	10832
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10839	31.468	NaN	1803.1	30	0	397.15	0.139			+	29430	PCFPCHKI	8	58	472.726321915978	943.4380908987561	2	472.7261962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PCFPCHKI_	REV__ENSG00000104447|ENST00000395715|TRPS1;REV__nc|ENSG00000104447|Q9UHF7-3|TRPS1;REV__nc|ENSG00000104447|Q9UHF7|TRPS1;REV__TRPS1|p.N1193Mfs*5|1|0.3|ENSG00000104447|chr8:115414291-115414291|T/-|frameshift_variant;REV__TRPS1|p.N1276Kfs*5|1|0.21|ENSG00000104447|chr8:115414041-115414042|-/T|frameshift_variant	35.200714571348534	0.6875396545722289	5				NaN	NaN	0	NaN	6863	3974	10832
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10852	31.497	NaN	1364.8	30	0	181.71	0.214			+	20533	KFKDNLWQS	9	59	583.3037912165092	1164.5930294998184	2	583.3042602539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KFKDNLWQS_	REV__GSTM4|p.E49D|1|0.1|ENSG00000168765|chr1:109657249-109657249|A/C|missense_variant	40.05817265558897	0.419577045485086	5				NaN	NaN	0	NaN	6873	3977	10851
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10853	31.5	NaN	1238.1	30	0	140.59	0.106				-1	KSAFLCGVMK	10	69	570.8002319335938	NaN	0	570.8002319335938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_KSAFLC(Carbamidomethyl (C))GVMK_	ENSG00000125944|ENST00000302271|HNRNPR;ENSG00000135316|ENST00000369622|SYNCRIP;HNRNPR|p.L367Qfs*19|1|0.05|ENSG00000125944|chr1:23313620-23313621|-/TTTAATCTCT|frameshift_variant;HNRNPR|p.W594Gfs*15|1|0.23|ENSG00000125944|chr1:23310575-23310576|CA/-|frameshift_variant;nc|ENSG00000125944|O43390-2|HNRNPR;nc|ENSG00000125944|O43390-3|HNRNPR;nc|ENSG00000271793|O60506-2|SYNCRIP;nc|ENSG00000271793|O60506-3|SYNCRIP;nc|ENSG00000271793|O60506-4|SYNCRIP	55.08391021199286	0.27346126051334796	5				NaN	NaN	0	NaN	6874	3977	10851
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10854	31.502	NaN	1277.3	30	0	108.19	0.106	+			27596	MPMVTDNKM	9	60	533.7411499023438	NaN	0	533.7411499023438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MPMVTDNKM_	ENSG00000175054|ENST00000350721|ATR;nc|ENSG00000175054|Q13535-2|ATR;nc|ENSG00000175054|Q13535-3|ATR	52.936696900407355	0.1864545979552969	5				NaN	NaN	0	NaN	6875	3977	10851
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10855	31.504	NaN	2208.9	30	0	685.28	0.106			+	9855	EPVSELAPE	9	59	485.7378977534936	NaN	0	485.73809814453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EPVSELAPE_	REV__ENSG00000274588|ENST00000611977|DGKK	29.14955571784316	0.3303970763161698	5				NaN	NaN	0	NaN	6876	3977	10851
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10856	31.506	NaN	1504.7	30	0	151.49	0.106	+			39593	STGTIPKEI	9	58	473.26641845703125	NaN	0	473.26641845703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STGTIPKEI_	ENSG00000137070|ENST00000441545|IL11RA;nc|ENSG00000137070|Q14626-2|IL11RA	39.252832667884924	0.27938773122138094	5				NaN	NaN	0	NaN	6877	3977	10851
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10857	31.507	NaN	1310	30	0	199.76	0.106			+	25156	LLSTGPSH	8	37	406.21972280111896	NaN	0	406.2194519042969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LLSTGPSH_	REV__ENST00000532632.1_3_14:24659613-24664187:-|nuORF	33.51558372728122	1.7418937515398478	5				NaN	NaN	0	NaN	6878	3977	10851
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10858	31.509	NaN	1528.2	30	0	102.32	0.037			+	27264	MEVHLKDPPL	10	54	589.8155234142412	1177.6164938952822	2	589.8167114257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MEVHLKDPPL_	REV__ENSG00000138688|ENST00000679879|BLTP1;REV__ENST00000482114.1_1_4:123130334-123145991:+|nuORF;REV__KIAA1109-FSIP2|1|fusion;REV__nc|ENSG00000138688|Q2LD37-2|BLTP1;REV__nc|ENSG00000138688|Q2LD37-4|BLTP1;REV__nc|ENSG00000138688|Q2LD37-5|BLTP1;REV__nc|ENSG00000138688|Q2LD37-6|BLTP1;REV__nc|ENSG00000138688|Q2LD37-7|BLTP1;REV__nc|ENSG00000138688|Q2LD37|BLTP1	30.317721548370564	0.6322445173429027	5				NaN	NaN	0	NaN	6879	3977	10851
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10872	31.539	NaN	5995.8	30	0	935.3	0.214	+			18814	ITVGDIGPK	9	65	450.2633846284293	898.5122163236587	2	450.26318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ITVGDIGPK_	ACOX1|p.N501Tfs*6|1|0.47|ENSG00000161533|chr17:75949577-75949577|T/-|frameshift_variant;ENSG00000161533|ENST00000293217|ACOX1;nc|ENSG00000161533|Q15067-3|ACOX1;nc|ENSG00000161533|Q15067|ACOX1	85.16082228582465	0.07850854922700509	5				NaN	NaN	0	NaN	6890	3980	10871
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10873	31.543	NaN	3152.3	30	0	1032.4	0.106			+	7329	DAVAGRIAGQ	10	58	479.2609256531267	956.5072983730535	2	479.26141357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DAVAGRIAGQ_	REV__ENSG00000172037|ENST00000305544|LAMB2	52.936696900407355	0.4300801048568001	5				NaN	NaN	0	NaN	6891	3980	10871
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10874	31.545	NaN	1077.9	30	0	115.39	0.106				-1	ITRRCSKD	8	58	518.270030410049	1034.525507886898	2	518.2705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_ITRRC(Carbamidomethyl (C))SKD_	ENST00000492022.1_1_19:58727564-58727924:+|nuORF	68.78682469695295	0.41700713582915416	5				NaN	NaN	0	NaN	6892	3980	10871
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10875	31.546	NaN	1084.9	30	0	70.99	0.106			+	33613	RLRREEMK	8	56	559.3189773613618	NaN	0	559.3182373046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RLRREEMK_	REV__ENSG00000075399|ENST00000389386|VPS9D1;REV__nc|ENSG00000075399|Q9Y2B5-2|VPS9D1;REV__VPS9D1|p.A504Gfs*67|1|0.5|ENSG00000075399|chr16:89709313-89709314|-/C|frameshift_variant;REV__VPS9D1|p.D265Gfs*127|1|0.45|ENSG00000075399|chr16:89711366-89711367|-/C|frameshift_variant;REV__VPS9D1|p.P316Rfs*93|1|0.12|ENSG00000075399|chr16:89710897-89710897|G/-|frameshift_variant	25.57405402267927	1.7418937515398478	5				NaN	NaN	0	NaN	6893	3980	10871
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10876	31.548	NaN	2330.3	30	0	158.14	0.106	+			1395	AEVQKLQAL	9	58	500.2952957720197	NaN	0	500.294677734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEVQKLQAL_	ENSG00000126777|ENST00000395314|KTN1;KTN1|p.A1102Gfs*15|2|0.3|ENSG00000126777|chr14:55670756-55670757|-/A|frameshift_variant;KTN1|p.H994Sfs*2|1|0.35|ENSG00000126777|chr14:55659677-55659678|-/C|frameshift_variant;KTN1|p.K1078Nfs*12|1|0.3|ENSG00000126777|chr14:55667292-55667292|A/-|frameshift_variant;KTN1|p.K1101Rfs*18|1|0.4|ENSG00000126777|chr14:55670757-55670757|A/-|frameshift_variant;KTN1|p.P993Lfs*6|1|0.36|ENSG00000126777|chr14:55659678-55659678|C/-|frameshift_variant;nc|ENSG00000126777|Q86UP2-2|KTN1;nc|ENSG00000126777|Q86UP2-3|KTN1;nc|ENSG00000126777|Q86UP2-4|KTN1	67.49366992349736	0.1173583512313808	5				NaN	NaN	0	NaN	6894	3980	10871
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10877	31.55	NaN	2141	30	0	169.32	0.036			+	47613	VRYLPEAQI	9	72	544.8086653048379	NaN	0	544.8095092773438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VRYLPEAQI_	REV__ENSG00000166963|ENST00000300231|MAP1A;REV__MAP1A|p.G2418Afs*36|1|0.26|ENSG00000166963|chr15:43528722-43528722|G/-|frameshift_variant;REV__MAP1A|p.K1546Rfs*6|1|0.28|ENSG00000166963|chr15:43526107-43526107|A/-|frameshift_variant;REV__MAP1A|p.L1905Pfs*9|1|0.27|ENSG00000166963|chr15:43527180-43527181|-/C|frameshift_variant;REV__MAP1A|p.R2065Vfs*5|1|0.25|ENSG00000166963|chr15:43527660-43527660|C/-|frameshift_variant;REV__MAP1A|p.S2460Ifs*4|1|0.32|ENSG00000166963|chr15:43528844-43528845|-/C|frameshift_variant;REV__MAP1A|p.V1503Sfs*16|1|0.28|ENSG00000166963|chr15:43525975-43525975|A/-|frameshift_variant;REV__nc|ENSG00000166963|P78559-2|MAP1A	37.81151784470057	0.28666463014928195	5				NaN	NaN	0	NaN	6895	3980	10871
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10889	31.576	NaN	3451.3	30	0	382.49	0.214			+	21973	KSEINQQIS	9	67	523.7775128916348	1045.5404728500696	2	523.7779541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSEINQQIS_	REV__tr|U7T2Q1|U7T2Q1_FUSNUGeneralsecretionpathwayproteinDOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00785PE=3SV=1	45.97224482568171	0.3502073465782774	5				NaN	NaN	0	NaN	6904	3983	10888
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10890	31.579	NaN	2184	30	0	388.3	0.106	+			34839	RYPDSHQLF	9	56	581.7854414921134	1161.5563300510266	2	581.786376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RYPDSHQLF_	ENSG00000138757|ENST00000359707|G3BP2;nc|ENSG00000138757|Q9UN86-2|G3BP2	27.047317107675042	0.5504760921104335	5				NaN	NaN	0	NaN	6905	3983	10888
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10891	31.581	NaN	895.03	30	0	67.945	0.106	+			443	AAVGKSSFL	9	41	440.2499703338391	NaN	0	440.2498779296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AAVGKSSFL_	ENSG00000165105|ENST00000376447|RASEF	62.107414245175825	0.1403307765918332	5				NaN	NaN	0	NaN	6906	3983	10888
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10892	31.583	NaN	6000.8	30	0	868.73	0.106	+			48348	VTGLFKDRPL	10	50	382.5607635726872	1144.6604613182617	3	382.895263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTGLFKDRPL_	PIK3C2B|p.S1150L|1|0.14|ENSG00000133056|chr1:204439002-204439002|G/A|missense_variant	26.69291269510374	0.6618461711292317	5				NaN	NaN	0	NaN	6907	3983	10888
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10893	31.585	NaN	1757	30	0	524.92	0.106				-1	KSKECVPKL	9	35	363.5413999501711	1087.6023704507134	3	363.8752746582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_KSKEC(Carbamidomethyl (C))VPKL_	ENSG00000187758|ENST00000209668|ADH1A	44.377184641726394	0.36891676396732553	5				NaN	NaN	0	NaN	6908	3983	10888
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10894	31.586	NaN	995.72	30	0	139.66	0.036			+	48957	VVFVVDSHIG	10	52	536.2954011835867	NaN	0	536.2950439453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VVFVVDSHIG_	REV__ABTB1|p.E189Gfs*22|1|0.12|ENSG00000114626|chr3:127677004-127677011|TGAGCGCC/-|frameshift_variant;REV__ABTB1|p.E252Sfs*102|1|0.29|ENSG00000114626|chr3:127677272-127677272|C/-|frameshift_variant;REV__ABTB1|p.P318Qfs*36|2|0.4|ENSG00000114626|chr3:127677762-127677762|C/-|frameshift_variant;REV__ENSG00000114626|ENST00000232744|ABTB1;REV__ENST00000464431.1_1_3:127395028-127395444:+|nuORF;REV__ENST00000479280.5_1_3:127391883-127395444:+|nuORF;REV__ENST00000483857.5_1_3:127391815-127395444:+|nuORF;REV__ENST00000491633.5_1_3:127394949-127398855:+|nuORF;REV__nc|ENSG00000114626|Q969K4-3|ABTB1	24.20275056022122	0.4201028297492154	5				NaN	NaN	0	NaN	6909	3983	10888
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10895	31.587	NaN	1276.1	30	0	101.28	0.145			+	23323	KYRLDDQTNQS	11	57	684.3291015625	NaN	0	684.3291015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KYRLDDQTNQS_	REV__nc|ENSG00000197617|Q7Z5H4|VN1R5	49.536043120802724	0.3186510426945788	5				NaN	NaN	0	NaN	6910	3983	10888
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10907	31.614	NaN	6934.5	30	0	934.47	0.214	+			1220	AEQKVEYTL	9	68	540.7823278023733	1079.5501026715465	2	540.7830200195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEQKVEYTL_	ENSG00000114867|ENST00000346169|EIF4G1;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;ENST00000460829.5_1_3:184046782-184052693:+|nuORF;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1	101.45984612302182	0.0377122763612125	5				NaN	NaN	0	NaN	6919	3986	10906
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10908	31.618	NaN	1803.5	30	0	276.78	0.106			+	-1	GSPMPHSRL	9	53	499.24615025215735	996.4777475711147	2	499.24700927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_GSPM(Oxidation (M))PHSRL_	REV__ENST00000542570.5_2_17:18205959-18206001:-|nuORF	39.252832667884924	0.4290233611298554	5				NaN	NaN	0	NaN	6920	3986	10906
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10909	31.62	NaN	1144.9	30	0	61.962	0.106				-1	QPAVSPNGAAI	11	64	533.7782213969479	NaN	0	533.7767333984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))QPAVSPNGAAI_	ENST00000508798.5_1_4:99393528-99393573:-|nuORF	35.15202426646627	0.40875833226131825	5				NaN	NaN	0	NaN	6921	3986	10906
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10910	31.622	NaN	1059.2	30	0	51.655	0.106	+			20528	KFIDTTSKF	9	61	543.7955730786914	NaN	0	543.795654296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KFIDTTSKF_	ENSG00000100316|ENST00000216146|RPL3;ENSG00000140986|ENST00000268661|RPL3L;ENST00000417615.1_1_14:99439218-99439536:-|nuORF;ENST00000473638.5_1_22:39708982-39709710:-|nuORF	47.95952297671804	0.22075498469600283	5				NaN	NaN	0	NaN	6922	3986	10906
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10911	31.624	NaN	1402.4	30	0	180.78	0.036			+	24754	LHSYCNELP	9	60	538.2452967594918	1074.4760405857835	2	538.2425537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LHSYCNELP_	REV__ENSG00000163312|ENST00000295488|HELQ;REV__HELQ|p.E864Gfs*7|1|0.07|ENSG00000163312|chr4:83427648-83427649|-/GC|frameshift_variant;REV__HELQ|p.F782Lfs*9|1|0.13|ENSG00000163312|chr4:83429696-83429696|A/-|frameshift_variant	31.529811441608018	0.5085848003137583	5				NaN	NaN	0	NaN	6923	3986	10906
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10926	31.654	NaN	12243	30	0	3518.9	0.214	+			48964	VVGAVVFQK	9	65	473.7895485950405	945.564544256881	2	473.7893371582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVGAVVFQK_	ENSG00000169223|ENST00000303127|LMAN2;ENST00000504071.1_1_5:176759089-176761465:-|nuORF;ENST00000515209.5_1_5:176759089-176761331:-|nuORF	143.01937276914788	0.00906355689373299	5				NaN	NaN	0	NaN	6935	3989	10925
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10927	31.658	NaN	2488.2	30	0	507.22	0.106	+			50836	YETKTALL	8	59	469.76319906697904	937.5118452007581	2	469.7630615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YETKTALL_	ENSG00000100242|ENST00000689035|SUN2;nc|ENSG00000100242|Q9UH99-2|SUN2;nc|ENSG00000100242|Q9UH99-3|SUN2	51.33545320467046	0.5859736979383976	5				NaN	NaN	0	NaN	6936	3989	10925
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10928	31.66	NaN	1556.6	30	0	270.66	0.106			+	23925	LDNVKMTKP	9	54	523.2877807617188	NaN	0	523.2877807617188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LDNVKMTKP_	REV__CCAR1|p.E816Kfs*75|1|0.25|ENSG00000060339|chr10:68771347-68771347|A/-|frameshift_variant;REV__CCAR1|p.S739Vfs*11|1|0.47|ENSG00000060339|chr10:68765992-68765992|A/-|frameshift_variant;REV__ENSG00000060339|ENST00000265872|CCAR1;REV__nc|ENSG00000060339|Q8IX12-2|CCAR1	47.657333605630114	0.2228375344433429	5				NaN	NaN	0	NaN	6937	3989	10925
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10929	31.662	NaN	2302.8	30	0	903.9	0.036			+	39815	STLGNLSEKS	10	33	345.84777773381336	1034.5215038016402	3	345.8478088378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STLGNLSEKS_	REV__ENSG00000174718|ENST00000312561|RESF1	32.75053402867276	0.6123771875927935	5				NaN	NaN	0	NaN	6938	3989	10925
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10940	31.687	NaN	16529	30	0	1135.1	0.214	+			40655	SVAQVVLSR	9	84	479.7876496678239	957.5607464024479	2	479.7873840332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVAQVVLSR_	ENSG00000165272|ENST00000297991|AQP3;ENST00000463983.5_1_9:33443205-33447528:-|nuORF;ENST00000493581.1_1_9:33443725-33447528:-|nuORF;nc|ENSG00000165272|Q92482-2|AQP3	92.23892857375223	0.05855307001735979	5				NaN	NaN	0	NaN	6946	3992	10939
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10941	31.691	NaN	2135.6	30	0	322.05	0.106	+			41904	SVVEHRLR	8	59	498.2920574266438	994.5695619200876	2	498.2919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVVEHRLR_	ENSG00000102967|ENST00000219240|DHODH;ENST00000571392.1_1_16:72050863-72057137:+|nuORF;ENST00000572003.5_1_16:72048341-72054317:+|nuORF;ENST00000573922.5_1_16:72046155-72057137:+|nuORF	40.77816245573522	0.6514838689002179	5				NaN	NaN	0	NaN	6947	3992	10939
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10942	31.692	NaN	2258.8	30	0	285.75	0.106	+			24154	LELQGGDRVI	10	70	550.3091505817522	1098.6037482303043	2	550.3096923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LELQGGDRVI_	ENSG00000169733|ENST00000310496|RFNG;ENST00000580953.5_1_17:80007881-80009420:-|nuORF;ENST00000584463.1_1_17:80008413-80009233:-|nuORF;ENST00000584515.1_1_17:80008413-80009420:-|nuORF	46.45678178249821	0.4896490706773647	5				NaN	NaN	0	NaN	6948	3992	10939
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10943	31.694	NaN	2801.3	30	0	446.13	0.106			+	-1	VCQLKKPTL	9	46	362.8817739655477	1085.6234924968433	3	362.8819885253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_VC(Carbamidomethyl (C))QLKKPTL_	REV__ENSG00000142515|ENST00000326003|KLK3;REV__nc|ENSG00000142515|P07288-2|KLK3;REV__nc|ENSG00000142515|P07288-3|KLK3;REV__nc|ENSG00000142515|P07288-5|KLK3	42.396135135203025	0.392153681582562	5				NaN	NaN	0	NaN	6949	3992	10939
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10944	31.696	NaN	1551.3	30	0	217	0.106	+			37313	SLDQLKGL	8	55	437.25561721776796	NaN	0	437.2556457519531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SLDQLKGL_	ENSG00000136982|ENST00000313655|DSCC1	58.78195531508484	1.7418937515398478	5				NaN	NaN	0	NaN	6950	3992	10939
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10945	31.698	NaN	1491.4	30	0	220.87	0.036	+			11678	FQYSKSPSL	9	56	528.770995518388	1055.5274381035758	2	528.7723388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FQYSKSPSL_	CLTC-CEP95|1|fusion;ENSG00000258890|ENST00000556440|CEP95;ENST00000553956.6_1_17:62527116-62533894:+|nuORF;nc|ENSG00000258890|Q96GE4-2|CEP95	42.86426827375447	0.38666266728046506	5				NaN	NaN	0	NaN	6951	3992	10939
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10946	31.699	NaN	1469.7	30	0	95.181	0.14	+			35417	SARDSVRPK	9	54	508.2850600141232	NaN	0	508.2845458984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SARDSVRPK_	ENSG00000120278|ENST00000696526|PLEKHG1;PLEKHG1|p.S974Afs*5|1|0.07|ENSG00000120278|chr6:150832027-150832027|A/-|frameshift_variant	32.81241826257853	0.3119040447479903	5				NaN	NaN	0	NaN	6952	3992	10939
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10959	31.728	NaN	8089.4	30	0	1122.5	0.214	+			12669	GEITGEVHM	9	66	486.72612347637687	971.4376940195538	2	486.7261047363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEITGEVHM_	ENSG00000136068|ENST00000295956|FLNB;ENST00000481470.5_1_3:58118395-58154450:+|nuORF;nc|ENSG00000136068|O75369-2|FLNB;nc|ENSG00000136068|O75369-3|FLNB;nc|ENSG00000136068|O75369-4|FLNB;nc|ENSG00000136068|O75369-5|FLNB;nc|ENSG00000136068|O75369-6|FLNB;nc|ENSG00000136068|O75369-7|FLNB;nc|ENSG00000136068|O75369-8|FLNB;nc|ENSG00000136068|O75369-9|FLNB	96.19043198914106	0.047412499214244314	5				NaN	NaN	0	NaN	6962	3995	10958
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10960	31.731	NaN	3971.8	30	0	679.2	0.106	+			35472	SATETCYTY	9	63	548.2183068679419	1094.4220608026837	2	548.2191772460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SATETC(Carbamidomethyl (C))YTY_	ENSG00000132465|ENST00000254801|JCHAIN	120.62098272573253	0.020823834273767324	5				NaN	NaN	0	NaN	6963	3995	10958
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10961	31.733	NaN	2451.4	30	0	772.95	0.106				-1	MNRCVCARM	9	57	570.7487515154062	1139.4829500976123	2	570.749755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_MNRC(Carbamidomethyl (C))VCARM_	ENSG00000171133|ENST00000302681|OR2K2	23.04248740728303	0.5879033540491928	5				NaN	NaN	0	NaN	6964	3995	10958
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10962	31.735	NaN	1938.9	30	0	769.51	0.106				-1	VPWCELVLM	9	37	388.1928358999401	1161.5566783000204	3	388.1929626464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_VPWC(Carbamidomethyl (C))ELVLM(Oxidation (M))_	ENST00000422647.5_1_7:99156430-99158253:+|nuORF	21.9598887501803	0.5980208138527809	5				NaN	NaN	0	NaN	6965	3995	10958
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10963	31.737	NaN	1379.4	30	0	162.45	0.106			+	28387	NELLRFQL	8	55	516.7962454527697	NaN	0	516.7965087890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NELLRFQL_	REV__ENSG00000151790|ENST00000536354|TDO2	41.42661286455405	1.7418937515398478	5				NaN	NaN	0	NaN	6966	3995	10958
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10964	31.738	NaN	1616.2	30	0	146.36	0.035	+			50764	YEKLGSTDL	9	59	513.2611185731276	1024.5076842130552	2	513.261474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YEKLGSTDL_	ENSG00000105726|ENST00000357324|ATP13A1;ENST00000473243.5_1_19:19762333-19765368:-|nuORF;nc|ENSG00000105726|Q9HD20-2|ATP13A1	47.657333605630114	0.33044192980041115	5				NaN	NaN	0	NaN	6967	3995	10958
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10965	31.739	NaN	972.98	30	0	41.375	0.141			+	31177	QGLLQELHE	9	56	533.7782213969479	NaN	0	533.7778930664062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QGLLQELHE_	REV__ENSG00000140326|ENST00000356231|CDAN1;REV__nc|ENSG00000140326|Q8IWY9-1|CDAN1	34.172542307311794	0.30503706118289736	5				NaN	NaN	0	NaN	6968	3995	10958
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10978	31.768	NaN	25183	30	0	4575.7	0.214	+			42817	TEARFGAQL	9	80	496.7613175960403	991.5080822588807	2	496.7613830566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEARFGAQL_	CON__P08727;ENSG00000171345|ENST00000361566|KRT19	98.58198989935565	0.04066992115528678	5				NaN	NaN	0	NaN	6978	3998	10977
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10979	31.772	NaN	6856.1	30	0	842.32	0.106	+			43197	TEVGVGAITL	10	73	480.27380511921973	958.5330573052395	2	480.273681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEVGVGAITL_	tr|U7SFX4|U7SFX4_FUSNUHAE1familyhydrophobic/amphiphilicexporter-1(MainlyG-bacteria)OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02268PE=4SV=1	62.107414245175825	0.3466735403679669	5				NaN	NaN	0	NaN	6979	3998	10977
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10980	31.774	NaN	2441	30	0	968.62	0.037	+			30332	PTSCSTCRMW	10	58	586.2379541452134	1170.4613553572267	2	586.2384643554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PTSCSTCRMW_	BRD3|p.P24Rfs*24|1|0.34|ENSG00000169925|chr9:134053407-134053407|G/-|frameshift_variant	31.529811441608018	0.6223461015008678	5				NaN	NaN	0	NaN	6980	3998	10977
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10992	31.799	NaN	2855.8	30	0	426.66	0.214	+			5441	ATYQTTLLH	9	55	524.2773435754065	1046.5401342176128	2	524.2779541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATYQTTLLH_	ENSG00000003147|ENST00000402384|ICA1;ENST00000562640.1_1_16:22010196-22010523:+|nuORF;ICA1|p.E307Lfs*26|1|0.05|ENSG00000003147|chr7:8141801-8141802|-/TTTTTCAA|frameshift_variant;nc|ENSG00000003147|Q05084-2|ICA1;nc|ENSG00000003147|Q05084-3|ICA1	42.86426827375447	0.38666266728046506	5				NaN	NaN	0	NaN	6989	4001	10991
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10993	31.803	NaN	3411.6	30	0	702.9	0.106	+			1140	AEMAQNAVRL	10	64	551.7869690307632	1101.5593851283263	2	551.7874145507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEMAQNAVRL_	ENSG00000168036|ENST00000349496|CTNNB1	72.87924865735499	0.25379688738724415	5				NaN	NaN	0	NaN	6990	4001	10991
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10994	31.805	NaN	1917.5	30	0	198.76	0.106			+	30888	QEKKTLYV	8	61	504.78974721322135	NaN	0	504.78961181640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QEKKTLYV_	REV__ENSG00000117360|ENST00000324862|PRPF3;REV__ENST00000467329.5_1_1:150300781-150316915:+|nuORF;REV__ENST00000493553.1_1_1:150315777-150316738:+|nuORF;REV__ENST00000519029.1_1_8:67896909-67897419:-|nuORF	35.61828744233558	1.7418937515398478	5				NaN	NaN	0	NaN	6991	4001	10991
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10995	31.807	NaN	2358	30	0	326.33	0.106	+			686	AEALAAGADT	10	55	445.21712156468493	888.4196901961699	2	445.2169189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEALAAGADT_	UGGT1|p.I848T|1|0.29|ENSG00000136731|chr2:128159701-128159701|T/C|missense_variant	45.97224482568171	0.49411383603842696	5				NaN	NaN	0	NaN	6992	4001	10991
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10996	31.808	NaN	2129.8	30	0	987.3	0.106			+	765	AEELHAFIVA	10	33	367.1976196232181	1098.5710294698542	3	367.1975402832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEELHAFIVA_	REV__ENSG00000099337|ENST00000263372|KCNK6;REV__nc|ENSG00000099337|Q9Y257-2|KCNK6	24.20275056022122	0.6821818413321409	5				NaN	NaN	0	NaN	6993	4001	10991
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10997	31.81	NaN	1400.3	30	0	102.79	0.035				-1	KGRCSREK	8	59	510.7713818908626	NaN	0	511.2352600097656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_KGRC(Carbamidomethyl (C))SREK_	ENSG00000076770|ENST00000370853|MBNL3;ENSG00000152601|ENST00000324210|MBNL1;ENST00000460166.1_1_3:152132852-152173345:+|nuORF;nc|ENSG00000076770|Q9NUK0-2|MBNL3;nc|ENSG00000076770|Q9NUK0-3|MBNL3;nc|ENSG00000076770|Q9NUK0-4|MBNL3;nc|ENSG00000076770|Q9NUK0-5|MBNL3;nc|ENSG00000152601|Q9NR56-2|MBNL1;nc|ENSG00000152601|Q9NR56-3|MBNL1;nc|ENSG00000152601|Q9NR56-4|MBNL1;nc|ENSG00000152601|Q9NR56-6|MBNL1;nc|ENSG00000152601|Q9NR56-7|MBNL1;nc|ENSG00000152601|Q9NR56|MBNL1	49.44154591367651	1.7418937515398478	5				NaN	NaN	0	NaN	6994	4001	10991
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10998	31.811	NaN	1663.5	30	0	638.63	0.139	+			13240	GILHKDLK	8	46	462.2870546632518	NaN	0	462.2872009277344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GILHKDLK_	ENSG00000171435|ENST00000339824|KSR2	25.450171626174864	1.7418937515398478	5				NaN	NaN	0	NaN	6995	4001	10991
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11005	31.829	NaN	2651.8	30	0	1432.7	0.214			+	22811	KVFLGKVNV	9	58	502.3183198666758	1002.6220868001516	2	502.31890869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVFLGKVNV_	REV__ENSG00000152936|ENST00000458174|LMNTD1;REV__nc|ENSG00000152936|Q8N9Z9-2|LMNTD1;REV__nc|ENSG00000152936|Q8N9Z9-3|LMNTD1;REV__nc|ENSG00000152936|Q8N9Z9-4|LMNTD1;REV__nc|ENSG00000152936|Q8N9Z9|LMNTD1	37.81151784470057	0.4459294069877048	5				NaN	NaN	0	NaN	6999	4004	11004
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11006	31.833	NaN	1642.3	30	0	247.55	0.106			+	-1	QVRCAPTLEG	10	52	565.7848824272484	1129.5552119212966	2	565.78564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_QVRC(Carbamidomethyl (C))APTLEG_	REV__PPIP5K2|p.G519C|1|0.1|ENSG00000145725|chr5:103158253-103158253|G/T|missense_variant	26.69291269510374	0.6618461711292317	5				NaN	NaN	0	NaN	7000	4004	11004
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11007	31.834	NaN	3720.4	30	0	1355.3	0.034			+	35661	SDADVGSKF	9	50	463.2168024306563	924.4190519281126	2	463.21636962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SDADVGSKF_	REV__ENSG00000100612|ENST00000557185|DHRS7;REV__nc|ENSG00000100612|Q9Y394-2|DHRS7	44.116797842482775	0.37197099687881774	5				NaN	NaN	0	NaN	7001	4004	11004
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11015	31.853	NaN	1825.7	30	0	253.76	0.215			+	25621	LQPPLPQATM	10	58	556.2945263447959	1110.5744997563918	2	556.294189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LQPPLPQATM(Oxidation (M))_	REV__ENSG00000149308|ENST00000278612|NPAT;REV__ENST00000610253.5_1_11:108042863-108061204:-|nuORF;REV__NPAT|p.H1279Qfs*13|1|0.22|ENSG00000149308|chr11:108161248-108161249|TA/-|frameshift_variant;REV__NPAT|p.K1038Efs*20|1|0.37|ENSG00000149308|chr11:108161974-108161975|-/C|frameshift_variant;REV__NPAT|p.S1040Ifs*18|2|0.28|ENSG00000149308|chr11:108161968-108161969|-/T|frameshift_variant	52.936696900407355	0.4300801048568001	5				NaN	NaN	0	NaN	7006	4007	11014
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11016	31.856	NaN	2051.5	30	0	213.53	0.034			+	25756	LSAEPLARL	9	55	485.29007891512805	968.5656048970561	2	485.2903747558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSAEPLARL_	REV__ENSG00000128731|ENST00000261609|HERC2;REV__HERC2|p.G2202Afs*8|1|0.2|ENSG00000128731|chr15:28213923-28213923|C/-|frameshift_variant	32.81241826257853	0.4965981579233955	5				NaN	NaN	0	NaN	7007	4007	11014
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11024	31.875	NaN	2348.7	30	0	365.3	0.214	+			23329	KYSLIKGNF	9	67	535.3060025985557	1068.5974522639112	2	535.3060302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KYSLIKGNF_	ENSG00000143546|ENST00000368733|S100A8	39.252832667884924	0.4290233611298554	5				NaN	NaN	0	NaN	7012	4010	11023
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11025	31.878	NaN	1768.1	30	0	159.35	0.035			+	22002	KSFSLINKI	9	61	525.3220964211553	NaN	0	525.3217163085938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KSFSLINKI_	REV__ENST00000442366.5_1_4:107269181-107269355:+|nuORF	37.81151784470057	0.28666463014928195	5				NaN	NaN	0	NaN	7013	4010	11023
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11038	31.906	NaN	2317	30	0	316.06	0.214	+			28181	NAPQLAEPY	9	60	501.7482005469897	1001.4818481607795	2	501.7486572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAPQLAEPY_	ENSG00000139880|ENST00000487137|CDH24;nc|ENSG00000139880|Q86UP0-3|CDH24;nc|ENSG00000139880|Q86UP0|CDH24	44.377184641726394	0.36891676396732553	5				NaN	NaN	0	NaN	7023	4013	11037
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11039	31.909	NaN	2351.8	30	0	757	0.106	+			32368	QVAEIVSKY	9	61	518.7884244462387	NaN	0	518.7888793945312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QVAEIVSKY_	ENSG00000138448|ENST00000261023|ITGAV;ITGAV|p.G401Efs*13|1|0.4|ENSG00000138448|chr2:186646721-186646721|A/-|frameshift_variant;ITGAV|p.G561Dfs*2|4|0.23|ENSG00000138448|chr2:186656358-186656358|G/-|frameshift_variant;ITGAV|p.V806Hfs*11|1|0.07|ENSG00000138448|chr2:186667758-186667759|-/CATTTTCAAAA|frameshift_variant;nc|ENSG00000138448|P06756-2|ITGAV;nc|ENSG00000138448|P06756-3|ITGAV	63.53385203322761	0.134247007536971	5				NaN	NaN	0	NaN	7024	4013	11037
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11040	31.911	NaN	2351	30	0	399.87	0.106	+			5436	ATYPYQVVR	9	64	548.792802207122	1095.571051481044	2	548.7940673828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATYPYQVVR_	ENSG00000164933|ENST00000297578|SLC25A32;ENST00000523701.1_1_8:104413742-104414267:-|nuORF	29.14955571784316	0.5308295550522326	5				NaN	NaN	0	NaN	7025	4013	11037
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11041	31.913	NaN	4013.6	30	0	581	0.106	+			26440	LTGPVMPVR	9	58	485.2811974483103	968.5478419634206	2	485.28155517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LTGPVMPVR_	ENSG00000167526|ENST00000311528|RPL13;ENST00000399461.8_1_16:89627605-89629447:+|nuORF;ENST00000484610.5_1_16:89627907-89629447:+|nuORF;ENST00000570149.1_1_16:89628679-89629447:+|nuORF;nc|ENSG00000167526|P26373-2|RPL13	56.72105179125745	0.24094814563026265	5				NaN	NaN	0	NaN	7026	4013	11037
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11042	31.915	NaN	1596.5	30	0	146.6	0.106			+	30221	PSSCGLGRM	9	54	454.2113474659996	NaN	0	454.2121887207031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PSSCGLGRM_	REV__ENST00000301490.8_2_11:67395419-67395788:-|nuORF	40.77816245573522	0.2702456086868081	5				NaN	NaN	0	NaN	7027	4013	11037
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11043	31.917	NaN	1185.6	30	0	104.84	0.033			+	28569	NKGIGNLK	8	49	422.2547912597656	NaN	0	422.2547912597656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NKGIGNLK_	REV__tr|U7SS28|U7SS28_FUSNUAutotransporterdomain-containingprotein(Fragment)OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01636PE=4SV=1;REV__tr|U7T1Q1|U7T1Q1_FUSNUAutotransporterdomain-containingprotein(Fragment)OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00530PE=4SV=1	50.0245360154114	1.7418937515398478	5				NaN	NaN	0	NaN	7028	4013	11037
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11056	31.944	NaN	5023.2	30	0	519.1	0.214				-1	LLSRSLLEKR	10	62	419.59433118575794	1255.7611641574738	3	419.5948181152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LLSRSLLEKR_	ENST00000598018.1_1_19:49936751-49940072:-|nuORF	62.166158670854095	0.3461392669251714	5				NaN	NaN	0	NaN	7038	4016	11055
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11057	31.947	NaN	2655	30	0	422.09	0.106			+	10183	ETAMTVAATLA	11	59	539.7766840585825	1077.538815183965	2	539.7772216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ETAMTVAATLA_	REV__ENSG00000162419|ENST00000373816|GMEB1;REV__GMEB1|p.E282Gfs*96|1|0.06|ENSG00000162419|chr1:28704275-28704276|-/GTAAAAA|frameshift_variant;REV__nc|ENSG00000162419|Q9Y692|GMEB1	69.6276240434122	0.23884409287757344	5				NaN	NaN	0	NaN	7039	4016	11055
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11058	31.949	NaN	860.64	30	0	147.63	0.106	+			21032	KKKIMGVG	8	41	430.77327674735125	859.5320005615025	2	430.7727966308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KKKIMGVG_	ENST00000273038.7_1_3:11599800-11599995:-|nuORF	21.70233525837049	0.7917639344264583	5				NaN	NaN	0	NaN	7040	4016	11055
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11059	31.951	NaN	2426.3	30	0	192.76	0.106			+	24093	LEKIQEAL	8	63	472.2760843155995	NaN	0	472.27606201171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LEKIQEAL_	REV__ENSG00000068831|ENST00000394432|RASGRP2;REV__ENST00000394428.5_1_11:64508346-64510391:-|nuORF;REV__ENST00000421556.5_1_11:64494776-64511570:-|nuORF;REV__nc|ENSG00000068831|Q7LDG7-2|RASGRP2;REV__nc|ENSG00000068831|Q7LDG7-3|RASGRP2;REV__nc|ENSG00000068831|Q7LDG7-4|RASGRP2;REV__RASGRP2|p.R494Afs*25|1|0.15|ENSG00000068831|chr11:64730128-64730128|C/-|frameshift_variant	60.11826168202944	1.7418937515398478	5				NaN	NaN	0	NaN	7041	4016	11055
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11060	31.953	NaN	1546.3	30	0	175.71	0.035	+			25432	LPNNAKLEM	9	54	515.2737417996995	NaN	0	515.2738647460938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LPNNAKLEM_	ENSG00000169696|ENST00000306739|ASPSCR1;nc|ENSG00000169696|Q9BZE9-2|ASPSCR1	35.15202426646627	0.3000918603816441	5				NaN	NaN	0	NaN	7042	4016	11055
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11070	31.975	NaN	9265.2	30	0	1333	0.214			+	31393	QKIVQQQL	8	65	492.79536717895814	983.5761814247163	2	492.79510498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QKIVQQQL_	REV__ENST00000475419.5_1_1:212220519-212220681:+|nuORF	79.9392285194092	0.32408006123154964	5				NaN	NaN	0	NaN	7049	4019	11069
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11071	31.978	NaN	16950	30	0	5828.5	0.106	+			13141	GGMSIFLKK	9	68	327.52460918698443	979.5519981611533	3	327.5246276855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GGMSIFLKK_	ENST00000264995.7_1_3:131220431-131221595:-|nuORF	35.61828744233558	0.47037581924408073	5				NaN	NaN	0	NaN	7050	4019	11069
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11072	31.98	NaN	3126.3	30	0	644.21	0.106	+			46830	VIEGSLQPI	9	56	478.27643879310006	954.5383246530001	2	478.2760314941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VIEGSLQPI_	ENSG00000133110|ENST00000379747|POSTN;nc|ENSG00000133110|Q15063-10|POSTN;nc|ENSG00000133110|Q15063-8|POSTN;nc|ENSG00000133110|Q15063-9|POSTN	45.97224482568171	0.3502073465782774	5				NaN	NaN	0	NaN	7051	4019	11069
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11073	31.982	NaN	4003.8	30	0	493.97	0.106	+			2159	ALLLPPSRH	9	60	502.30434250360827	1002.5941320740166	2	502.30450439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ALLLPPSRH_	ENST00000339560.9_1_19:14048664-14049262:-|nuORF;ENST00000538517.6_1_19:14048664-14064120:-|nuORF	44.377184641726394	0.36891676396732553	5				NaN	NaN	0	NaN	7052	4019	11069
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11074	31.984	NaN	2360.5	30	0	197.89	0.035	+			24124	LEKSMEPSL	9	65	517.2654399769602	1032.5163270207204	2	517.2664794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LEKSMEPSL_	ENSG00000123338|ENST00000293373|NCKAP1L;ENST00000547500.1_1_12:54891564-54894436:+|nuORF;NCKAP1L|p.L134Sfs*11|1|0.04|ENSG00000123338|chr12:54508424-54508425|-/AGTGCTCAATATATTCCGAGTGAATCTAT|frameshift_variant	79.71258880314673	0.09879134589249085	5				NaN	NaN	0	NaN	7053	4019	11069
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11087	32.011	NaN	1922.1	30	0	737.29	0.214			+	21897	KRRKQAKE	8	51	522.3273036337288	1042.6400543342575	2	522.3268432617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KRRKQAKE_	REV__ENSG00000198464|ENST00000595962|ZNF480;REV__ENST00000335090.6_1_19:52803665-52819104:+|nuORF	44.116797842482775	0.6307669463330267	5				NaN	NaN	0	NaN	7063	4022	11086
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11088	32.015	NaN	2104.9	30	0	175.49	0.106	+			10546	EYAKIEETM	9	60	557.2606458572742	1112.5067387813483	2	557.2612915039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EYAKIEETM_	CADPS2|p.D1011Nfs*3|1|0.04|ENSG00000081803|chr7:122388716-122388717|-/ATGTATT|frameshift_variant;CADPS2|p.N1185Tfs*15|1|0.4|ENSG00000081803|chr7:122345632-122345632|T/-|frameshift_variant;ENSG00000081803|ENST00000449022|CADPS2;nc|ENSG00000081803|Q86UW7-2|CADPS2;nc|ENSG00000081803|Q86UW7-3|CADPS2	127.46168284122857	0.016682644177004526	5				NaN	NaN	0	NaN	7064	4022	11086
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11089	32.017	NaN	2041.4	30	0	353.46	0.106	+			49996	WANVGKSL	8	59	437.7425363592862	NaN	0	437.7425231933594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_WANVGKSL_	ENSG00000109452|ENST00000262992|INPP4B;ENST00000512630.5_1_4:143007384-143094853:-|nuORF	79.71258880314673	1.7418937515398478	5				NaN	NaN	0	NaN	7065	4022	11086
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11090	32.019	NaN	821.93	30	0	145.69	0.106			+	2264	ALVRASHI	8	41	433.7620668263293	865.5095807194587	2	433.76171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ALVRASHI_	REV__ENST00000526104.5_2_11:214726-214972:+|nuORF	31.954861631926434	0.7126016770032289	5				NaN	NaN	0	NaN	7066	4022	11086
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11091	32.02	NaN	1436.5	30	0	113.67	0.106	+			45415	TVVPRFKKK	9	45	368.2419761264889	NaN	0	368.2418518066406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TVVPRFKKK_	ENST00000461986.5_1_1:78183501-78187881:-|nuORF	26.69291269510374	0.34280015626154364	5				NaN	NaN	0	NaN	7067	4022	11086
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11092	32.022	NaN	1514.2	30	0	107.64	0.037			+	12015	FWKNNRTR	8	67	561.3020030720457	NaN	0	561.3021850585938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FWKNNRTR_	REV__ENSG00000174842|ENST00000370360|GLMN	35.61828744233558	1.7418937515398478	5				NaN	NaN	0	NaN	7068	4022	11086
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11093	32.023	NaN	2225.5	30	0	202.52	0.14	+			10778	FAGPCKVI	8	56	446.2412753474189	890.4679977616378	2	446.2413635253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_FAGPC(Carbamidomethyl (C))KVI_	ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC;PRKDC|p.D2437Wfs*3|1|0.11|ENSG00000253729|chr8:47840161-47840162|-/CA|frameshift_variant;PRKDC|p.E1557Sfs*16|1|0.16|ENSG00000253729|chr8:47886051-47886051|C/-|frameshift_variant;PRKDC|p.G1227Vfs*50|2|0.31|ENSG00000253729|chr8:47893306-47893306|C/-|frameshift_variant;PRKDC|p.K3681Nfs*6|1|0.32|ENSG00000253729|chr8:47785174-47785177|TTCT/-|frameshift_variant;PRKDC|p.M3670*|1|0.5|ENSG00000253729|chr8:47785212-47785212|T/-|frameshift_variant;PRKDC|p.M3846Cfs*12|1|0.13|ENSG00000253729|chr8:47779047-47779047|T/-|frameshift_variant;PRKDC|p.M4020Cfs*2|1|0.31|ENSG00000253729|chr8:47776968-47776968|T/-|frameshift_variant;PRKDC|p.N3605Kfs*3|1|0.22|ENSG00000253729|chr8:47788993-47788994|-/T|frameshift_variant;PRKDC|p.N4037Ifs*15|1|0.17|ENSG00000253729|chr8:47776916-47776916|T/-|frameshift_variant;PRKDC|p.R2704Gfs*13|2|0.34|ENSG00000253729|chr8:47834238-47834238|T/-|frameshift_variant;PRKDC|p.S3402Ifs*16|1|0.04|ENSG00000253729|chr8:47799302-47799303|-/AAACCGTGAGTTAGAGGAGGTAA|frameshift_variant;PRKDC|p.S4099Qfs*6|1|0.25|ENSG00000253729|chr8:47774265-47774265|A/-|frameshift_variant;PRKDC|p.T3268Pfs*7|1|0.5|ENSG00000253729|chr8:47803426-47803426|T/-|frameshift_variant;PRKDC|p.W3401Cfs*4|1|0.01|ENSG00000253729|chr8:47799304-47799305|-/AATGAATA|frameshift_variant	44.53106598305862	0.628196326904373	5				NaN	NaN	0	NaN	7069	4022	11086
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11109	32.058	NaN	12059	30	0	3786.7	0.214	+			15149	GTSELLLAK	9	60	466.2768573687328	930.5391618042656	2	466.2763977050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTSELLLAK_	ASAP1|p.P792Lfs*20|1|0.1|ENSG00000153317|chr8:130112120-130112120|G/-|frameshift_variant;ASAP2|p.H548Qfs*57|1|0.14|ENSG00000151693|chr2:9374842-9374842|C/-|frameshift_variant;ASAP2|p.L787Afs*16|1|0.31|ENSG00000151693|chr2:9388513-9388514|-/C|frameshift_variant;ENSG00000151693|ENST00000281419|ASAP2;ENSG00000153317|ENST00000518721|ASAP1;nc|ENSG00000151693|O43150-2|ASAP2;nc|ENSG00000153317|Q9ULH1-2|ASAP1	104.0567914643314	0.03506238181059741	5				NaN	NaN	0	NaN	7082	4025	11108
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11110	32.062	NaN	2441.6	30	0	451.16	0.106				-1	SAINSHLL	8	61	448.74539990704136	895.4762468808827	2	448.7450866699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SAINSHLL_	ENSG00000135249|ENST00000257700|RINT1;REV__ENSG00000116906|ENST00000366647|GNPAT;REV__GNPAT|p.A437V|1|0.31|ENSG00000116906|chr1:231270788-231270788|C/T|missense_variant;REV__nc|ENSG00000116906|O15228-2|GNPAT;RINT1|p.L239Nfs*46|1|0.03|ENSG00000135249|chr7:105547207-105547208|-/AAATATG|frameshift_variant;RINT1|p.L275*|1|0.08|ENSG00000135249|chr7:105547315-105547315|T/-|frameshift_variant;RINT1|p.P247Lfs*8|2|0.23|ENSG00000135249|chr7:105547230-105547230|C/-|frameshift_variant	82.24051045832904	0.30490469762271794	5				NaN	NaN	0	NaN	7083	4025	11108
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11111	32.064	NaN	2335	30	0	134.01	0.106	+			3781	ATAEVLNIGK	10	68	508.2926415339868	1014.5707301347736	2	508.292724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATAEVLNIGK_	ENSG00000128050|ENST00000512576|PAICS;ENST00000510584.1_1_4:57302478-57308067:+|nuORF;nc|ENSG00000128050|P22234-2|PAICS	76.16968421966216	0.22691431239609447	5				NaN	NaN	0	NaN	7084	4025	11108
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11112	32.065	NaN	1694.8	30	0	196.15	0.106	+			29717	PHLASVGSL	9	53	440.748134213738	879.481715494276	2	440.74786376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PHLASVGSL_	ENSG00000176092|ENST00000308182|CRYBG2	45.9519527083369	0.35044536499095585	5				NaN	NaN	0	NaN	7085	4025	11108
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11113	32.067	NaN	1666.5	30	0	169.1	0.106	+			41494	SVPEAQSAL	9	53	451.23515023308636	900.4557475329727	2	451.2346496582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVPEAQSAL_	ENSG00000086666|ENST00000261749|ZFAND6;ENST00000561017.1_1_15:80414070-80415156:+|nuORF;nc|ENSG00000086666|Q6FIF0-2|ZFAND6	62.107414245175825	0.1960472003779324	5				NaN	NaN	0	NaN	7086	4025	11108
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11114	32.069	NaN	1657.6	30	0	186.34	0.106	+			46446	VESINLVF	8	57	460.7596216741301	919.5046904150602	2	460.7591247558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VESINLVF_	ENST00000400335.8_1_22:29539276-29539381:+|nuORF	76.84663266511073	0.3498490246073164	5				NaN	NaN	0	NaN	7087	4025	11108
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11115	32.071	NaN	1560.4	30	0	325.13	0.036	+			34014	RSIRTCYW	8	64	542.7692260742188	NaN	0	542.7692260742188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RSIRTCYW_	ENST00000514698.5_1_4:995622-996120:+|nuORF	37.15910966729921	1.7418937515398478	5				NaN	NaN	0	NaN	7088	4025	11108
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11128	32.098	NaN	2307.4	30	0	261.62	0.214	+			25089	LLNGHAENW	9	64	527.2585281761615	1052.5025034191228	2	527.2588500976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LLNGHAENW_	ENST00000545113.1_1_12:21654766-21659882:+|nuORF	39.252832667884924	0.4290233611298554	5				NaN	NaN	0	NaN	7098	4028	11127
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11129	32.102	NaN	921.81	30	0	106.15	0.106	+			48090	VSTAPLHAVL	10	48	504.29761621486006	NaN	0	504.2984924316406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSTAPLHAVL_	nc|ENSG00000258366|Q9NZ71-2|RTEL1	29.14955571784316	0.4044631218331212	5				NaN	NaN	0	NaN	7099	4028	11127
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11130	32.104	NaN	3352.5	30	0	1023.2	0.036				-1	HRQVMLGVR	9	58	556.3112200219825	1110.607887110765	2	556.8139038085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_HRQVM(Oxidation (M))LGVR_	CLCN1|p.K856Efs*16|1|0.37|ENSG00000188037|chr7:143350620-143350621|-/G|frameshift_variant;CLCN1|p.P939Lfs*9|1|0.39|ENSG00000188037|chr7:143351810-143351810|C/-|frameshift_variant;CLCN1|p.R453Pfs*56|1|0.05|ENSG00000188037|chr7:143332824-143332825|-/C|frameshift_variant;ENSG00000188037|ENST00000343257|CLCN1	27.882242232435846	0.5426732730940306	5				NaN	NaN	0	NaN	7100	4028	11127
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11142	32.129	NaN	13961	30	0	3140.1	0.214	+			6146	AVQEFGLAR	9	67	495.7717934447168	989.5290339562337	2	495.7722473144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVQEFGLAR_	ENSG00000169230|ENST00000303204|PRELID1;nc|ENSG00000169230|Q9Y255-2|PRELID1	138.06239232086	0.011389075116295402	5				NaN	NaN	0	NaN	7109	4031	11141
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11143	32.133	NaN	2710.1	30	0	530.5	0.035	+			28423	NETVAIHSL	9	67	492.2614952962683	982.5084376593367	2	492.26226806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NETVAIHSL_	ENSG00000082269|ENST00000418814|FAM135A;FAM135A|p.N1165Ifs*3|1|0.07|ENSG00000082269|chr6:70526577-70526578|-/T|frameshift_variant;FAM135A|p.N999Ifs*5|1|0.39|ENSG00000082269|chr6:70526073-70526073|A/-|frameshift_variant;FAM135A|p.N999Kfs*2|1|0.18|ENSG00000082269|chr6:70526072-70526073|-/A|frameshift_variant;nc|ENSG00000082269|Q9P2D6-2|FAM135A;nc|ENSG00000082269|Q9P2D6-3|FAM135A;nc|ENSG00000082269|Q9P2D6-4|FAM135A	71.87747018426188	0.13267044672804276	5				NaN	NaN	0	NaN	7110	4031	11141
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11154	32.156	NaN	1951.4	30	0	153.12	0.214	+			16315	HEIEALKSF	9	67	537.284851602027	1072.5551502708538	2	537.2853393554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HEIEALKSF_	ENSG00000078618|ENST00000352171|NRDC;nc|ENSG00000078618|O43847-2|NRDC	88.17693792209575	0.07000514020414955	5				NaN	NaN	0	NaN	7118	4034	11153
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11155	32.16	NaN	2005.8	30	0	336.41	0.106	+			14102	GSLGRVLLP	9	56	456.2867836323636	910.5590143315272	2	456.2867736816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSLGRVLLP_	ENSG00000122965|ENST00000261741|RBM19;RBM19|p.F841Sfs*18|1|0.28|ENSG00000122965|chr12:113915007-113915007|G/-|frameshift_variant	37.15910966729921	0.4535818937225704	5				NaN	NaN	0	NaN	7119	4034	11153
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11156	32.162	NaN	1290.1	30	0	116.11	0.106	+			10593	EYKNTNEMF	9	54	588.2553099712871	NaN	0	588.255615234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EYKNTNEMF_	ENSG00000065243|ENST00000370521|PKN2;nc|ENSG00000065243|Q16513-2|PKN2;nc|ENSG00000065243|Q16513-3|PKN2;nc|ENSG00000065243|Q16513-4|PKN2;nc|ENSG00000065243|Q16513-5|PKN2	51.33545320467046	0.19748963086191895	5				NaN	NaN	0	NaN	7120	4034	11153
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11157	32.164	NaN	2158.9	30	0	469.96	0.035			+	44245	TRVVEPLFS	9	64	524.2955161320459	1046.5764793308917	2	524.2962036132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TRVVEPLFS_	REV__ENSG00000119121|ENST00000360774|TRPM6;REV__nc|ENSG00000119121|Q9BX84-2|TRPM6;REV__nc|ENSG00000119121|Q9BX84-3|TRPM6;REV__nc|ENSG00000119121|Q9BX84-4|TRPM6;REV__nc|ENSG00000119121|Q9BX84-5|TRPM6;REV__nc|ENSG00000119121|Q9BX84-6|TRPM6;REV__nc|ENSG00000119121|Q9BX84-7|TRPM6;REV__TRPM6|p.E1956Kfs*25|1|0.33|ENSG00000119121|chr9:74728308-74728308|C/-|frameshift_variant;REV__TRPM6|p.W1814C|1|0.36|ENSG00000119121|chr9:74739768-74739768|C/A|missense_variant	25.57405402267927	0.5642445186134241	5				NaN	NaN	0	NaN	7121	4034	11153
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11164	32.182	NaN	1822.8	30	0	207.58	0.214			+	16115	HDPLKEPEK	9	60	546.7875884328855	1091.560623932571	2	546.7879638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HDPLKEPEK_	REV__ENSG00000150873|ENST00000381585|C2orf50	36.446750945000026	0.4619375763483977	5				NaN	NaN	0	NaN	7125	4037	11163
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11165	32.185	NaN	1382.7	30	0	117.8	0.106	+			47313	VNVEINVAPGK	11	61	570.3251899525304	NaN	0	570.324462890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VNVEINVAPGK_	CON__P35527;ENSG00000171403|ENST00000246662|KRT9	62.79941183454855	0.2059610827151287	5				NaN	NaN	0	NaN	7126	4037	11163
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11166	32.187	NaN	1165.4	30	0	111.88	0.106			+	36341	SESSPGPHSI	10	49	499.2315615695422	996.4485702058844	2	499.23236083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SESSPGPHSI_	REV__ENSG00000186472|ENST00000333891|PCLO;REV__nc|ENSG00000186472|Q9Y6V0-6|PCLO;REV__PCLO|p.E1944Sfs*8|1|0.34|ENSG00000186472|chr7:82955124-82955124|T/-|frameshift_variant;REV__PCLO|p.K2442Sfs*2|4|0.29|ENSG00000186472|chr7:82953628-82953628|T/-|frameshift_variant;REV__PCLO|p.K3621Ifs*26|1|0.04|ENSG00000186472|chr7:82949726-82949727|-/CCAGATA|frameshift_variant;REV__PCLO|p.K4306Gfs*8|1|0.04|ENSG00000186472|chr7:82915067-82915070|TTTT/-|frameshift_variant;REV__PCLO|p.M3036Tfs*24|1|0.06|ENSG00000186472|chr7:82951481-82951482|-/G|frameshift_variant;REV__PCLO|p.N4248Kfs*31|1|0.28|ENSG00000186472|chr7:82915242-82915243|-/T|frameshift_variant;REV__PCLO|p.P1234Afs*11|1|0.31|ENSG00000186472|chr7:82966089-82966090|-/T|frameshift_variant;REV__PCLO|p.P2408Lfs*36|1|0.44|ENSG00000186472|chr7:82953730-82953730|G/-|frameshift_variant;REV__PCLO|p.Q3062Tfs*25|1|0.2|ENSG00000186472|chr7:82951405-82951406|-/G|frameshift_variant;REV__PCLO|p.S1913Vfs*9|1|0.32|ENSG00000186472|chr7:82955216-82955216|T/-|frameshift_variant;REV__PCLO|p.T3933Nfs*47|1|0.06|ENSG00000186472|chr7:82916188-82916189|-/T|frameshift_variant;REV__PCLO|p.T5069Qfs*20|1|0.11|ENSG00000186472|chr7:82760722-82760722|T/-|frameshift_variant;REV__PCLO|p.V1883Ffs*29|1|0.09|ENSG00000186472|chr7:82955307-82955307|T/-|frameshift_variant;REV__PCLO|p.Y3007Lfs*2|1|0.28|ENSG00000186472|chr7:82951935-82951936|-/A|frameshift_variant	25.57405402267927	0.6709832231498071	5				NaN	NaN	0	NaN	7127	4037	11163
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11167	32.189	NaN	1592.3	30	0	365.26	0.106	+			28020	MYHCLAEL	8	49	490.2235502094416	978.4325474856832	2	490.22357177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MYHCLAEL_	ENSG00000088827|ENST00000344754|SIGLEC1;nc|ENSG00000088827|Q9BZZ2-2|SIGLEC1;nc|ENSG00000088827|Q9BZZ2-3|SIGLEC1	42.47446043378293	0.6409579893742323	5				NaN	NaN	0	NaN	7128	4037	11163
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11168	32.191	NaN	1868	30	0	378.2	0.106	+			19708	KDSSKEQAR	9	62	524.774659392032	1047.534765850864	2	525.2857666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KDSSKEQAR_	ENSG00000164877|ENST00000297508|MICALL2;ENST00000472100.5_1_7:1481822-1498962:-|nuORF;MICALL2|p.P533Rfs*36|1|0.4|ENSG00000164877|chr7:1442305-1442305|G/-|frameshift_variant;nc|ENSG00000164877|Q8IY33-2|MICALL2;nc|ENSG00000164877|Q8IY33-4|MICALL2;nc|ENSG00000164877|Q8IY33-5|MICALL2	47.657333605630114	0.33044192980041115	5				NaN	NaN	0	NaN	7129	4037	11163
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11169	32.193	NaN	1403.6	30	0	127.2	0.036			+	7041	CSSGATRAYAA	11	56	529.2425419212071	NaN	0	529.2423706054688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_CSSGATRAYAA_	REV__CHD3|p.E368Rfs*116|1|0.39|ENSG00000170004|chr17:7894438-7894438|G/-|frameshift_variant	29.170058357718403	0.43541742044178583	5				NaN	NaN	0	NaN	7130	4037	11163
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11170	32.193	NaN	1414.2	30	0	186.96	0.14			+	27384	MKKQKMGY	8	50	507.2692151457846	1012.5238773583692	2	507.26947021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MKKQKMGY_	REV__ENSG00000147202|ENST00000324765|DIAPH2;REV__nc|ENSG00000147202|O60879-2|DIAPH2;REV__nc|ENSG00000147202|O60879-3|DIAPH2	35.200714571348534	0.6875396545722289	5				NaN	NaN	0	NaN	7131	4037	11163
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11182	32.221	NaN	5792.6	30	0	1354.5	0.214	+			3963	ATATLIIEH	9	60	484.77399698485164	967.5334410365033	2	484.77386474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATATLIIEH_	ENSG00000100522|ENST00000216410|GNPNAT1;ENST00000553987.1_1_14:53248483-53250189:-|nuORF	166.78253343968296	0.0033161236045811926	5				NaN	NaN	0	NaN	7140	4040	11181
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11183	32.224	NaN	7121.4	30	0	1704	0.106	+			43899	TNGLTLGVK	9	59	451.7693723261068	901.5241917190136	2	451.76824951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TNGLTLGVK_	PFN2|p.A68V|1|0.21|ENSG00000070087|chr3:149968480-149968480|G/A|missense_variant	54.776311868738084	0.25715957988447635	5				NaN	NaN	0	NaN	7141	4040	11181
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11184	32.226	NaN	2116.1	30	0	488.8	0.106	+			28518	NIDSREIAL	9	52	515.7798190908643	1029.5450852485285	2	515.7802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NIDSREIAL_	tr|U7SVY3|U7SVY3_FUSNUABCtransporterpermeaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01384PE=4SV=1	37.81151784470057	0.4459294069877048	5				NaN	NaN	0	NaN	7142	4040	11181
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11185	32.228	NaN	1687.5	30	0	169.5	0.106				-1	PCLIMGLVY	9	57	533.279170269128	1064.543787605056	2	533.2803344726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_PC(Carbamidomethyl (C))LIMGLVY_	ADRA2C|p.A221V|1|0.11|ENSG00000184160|chr4:3767268-3767268|C/T|missense_variant;ENSG00000184160|ENST00000330055|ADRA2C	29.841539824830324	0.5243625958137083	5				NaN	NaN	0	NaN	7143	4040	11181
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11186	32.23	NaN	3650.8	30	0	574.75	0.106	+			30452	PYTKVEESF	9	66	550.2689377986546	1098.5233226641092	2	550.77197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PYTKVEESF_	ENSG00000182858|ENST00000330817|ALG12	85.16082228582465	0.07850854922700509	5				NaN	NaN	0	NaN	7144	4040	11181
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11187	32.231	NaN	1588.5	30	0	605.64	0.106			+	34291	RTLGMSVG	8	44	410.71922333698393	819.4238937407679	2	410.71905517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RTLGMSVG_	REV__ENSG00000163938|ENST00000418458|GNL3;REV__nc|ENSG00000163938|Q9BVP2-2|GNL3	42.47446043378293	0.6409579893742323	5				NaN	NaN	0	NaN	7145	4040	11181
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11188	32.233	NaN	1436.3	30	0	249.5	0.036	+			48249	VTDETFLEK	9	61	541.2738271608454	1080.5331013884906	2	541.2741088867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VTDETFLEK_	ENSG00000128641|ENST00000392318|MYO1B;ENST00000494129.1_1_2:192246088-192252282:+|nuORF;MYO1B|p.A603Sfs*37|1|0.42|ENSG00000128641|chr2:191390310-191390311|-/A|frameshift_variant;MYO1B|p.F948Cfs*47|1|0.41|ENSG00000128641|chr2:191411140-191411141|-/TG|frameshift_variant;MYO1B|p.S730Afs*4|2|0.4|ENSG00000128641|chr2:191393178-191393178|A/-|frameshift_variant;nc|ENSG00000128641|O43795-2|MYO1B	64.20726635412375	0.17854274437659667	5				NaN	NaN	0	NaN	7146	4040	11181
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11200	32.259	NaN	9718	30	0	2616.1	0.214			+	37285	SLAPIAVTK	9	74	450.2814063751904	898.5482598171808	2	450.2812194824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLAPIAVTK_	REV__ENSG00000138496|ENST00000682323|PARP9;REV__nc|ENSG00000138496|Q8IXQ6-3|PARP9;REV__nc|ENSG00000138496|Q8IXQ6|PARP9;REV__PARP9|p.T633Pfs*5|2|0.22|ENSG00000138496|chr3:122537047-122537047|T/-|frameshift_variant	69.6276240434122	0.14239879520340665	5				NaN	NaN	0	NaN	7155	4043	11199
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11201	32.262	NaN	5501.8	30	0	1264.1	0.106	+			15006	GTNALLVVK	9	67	457.78665798517073	913.5587630371415	2	457.7867126464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTNALLVVK_	ENSG00000006712|ENST00000221265|PAF1;nc|ENSG00000006712|Q8N7H5-2|PAF1;nc|ENSG00000006712|Q8N7H5-3|PAF1	107.00750918261382	0.032051501805654005	5				NaN	NaN	0	NaN	7156	4043	11199
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11202	32.264	NaN	2692.5	30	0	391.74	0.106				-1	LGWESGRR	8	60	501.7589214622129	1001.5032899912259	2	501.75848388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LGWESGRR_	ENST00000508965.5_1_4:81105136-81117516:+|nuORF;ENST00000509375.5_1_4:81105076-81117516:+|nuORF	55.50420428727701	0.5462892107279674	5				NaN	NaN	0	NaN	7157	4043	11199
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11203	32.266	NaN	3105.2	30	0	686.33	0.106			+	2492	APSAPLSSRY	10	66	524.774659392032	1047.534765850864	2	524.7747192382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_APSAPLSSRY_	REV__ENST00000366672.4_1_1:230416903-230417056:+|nuORF	42.86426827375447	0.522752283233888	5				NaN	NaN	0	NaN	7158	4043	11199
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11204	32.268	NaN	1358.5	30	0	130	0.106			+	25072	LLLLREPA	8	53	462.7972290305448	923.5799051278897	2	462.7467956542969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LLLLREPA_	REV__ENST00000542123.5_1_12:12978967-12980208:+|nuORF	31.954861631926434	0.7126016770032289	5				NaN	NaN	0	NaN	7159	4043	11199
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11205	32.27	NaN	1217.1	30	0	132.74	0.106			+	43790	TLLASPVQ	8	45	414.744917835778	827.475282738356	2	414.7451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TLLASPVQ_	REV__ENST00000588238.1_1_19:4445497-4445788:-|nuORF	42.396135135203025	0.6414440140393314	5				NaN	NaN	0	NaN	7160	4043	11199
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11206	32.271	NaN	1406.2	30	0	109.66	0.036	+			23200	KYADVLLKH	9	57	543.819017524442	1085.6234821156838	2	543.8184814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KYADVLLKH_	tr|U7SPA0|U7SPA0_FUSNUMethionine--tRNAligaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=metGPE=3SV=1	45.97224482568171	0.3502073465782774	5				NaN	NaN	0	NaN	7161	4043	11199
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11219	32.299	NaN	6721.8	30	0	1157	0.214	+			5547	AVALPLQTK	9	62	470.79501846131177	939.5754839894236	2	470.7944030761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVALPLQTK_	ENSG00000171566|ENST00000499023|PLRG1;ENST00000512719.5_1_4:155467261-155471460:-|nuORF;nc|ENSG00000171566|O43660-2|PLRG1	54.776311868738084	0.25715957988447635	5				NaN	NaN	0	NaN	7171	4046	11218
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11220	32.302	NaN	3585.9	30	0	715.18	0.106	+			17748	IEQEQKLAL	9	76	536.3057454262138	1070.5969379192275	2	536.306396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IEQEQKLAL_	ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2	96.0336014099291	0.047854655524928534	5				NaN	NaN	0	NaN	7172	4046	11218
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11221	32.304	NaN	1433.5	30	0	120.02	0.106			+	17635	IEKDINKLRK	10	47	419.59433118575794	1255.7611641574738	3	419.9287414550781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IEKDINKLRK_	REV__tr|U7T609|U7T609_FUSNUPeptidaseM23domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00048PE=4SV=1	35.495647763667336	0.589959479604089	5				NaN	NaN	0	NaN	7173	4046	11218
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11222	32.306	NaN	1248.6	30	0	94.951	0.106			+	1424	AEWYKELDSNI	11	51	684.3288579490647	NaN	0	684.327392578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEWYKELDSNI_	REV__nc|ENSG00000145014|Q2T9K0-7|TMEM44	29.550750289552195	0.43372083775723597	5				NaN	NaN	0	NaN	7174	4046	11218
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11223	32.308	NaN	1540.6	30	0	239.27	0.034	+			18056	IIVGNPKAL	9	53	462.7972290305448	923.5799051278897	2	462.79632568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IIVGNPKAL_	ENSG00000005007|ENST00000262803|UPF1;ENST00000600689.1_1_19:18974163-18976510:+|nuORF;nc|ENSG00000005007|Q92900|UPF1	68.484700416344	0.1473408039581241	5				NaN	NaN	0	NaN	7175	4046	11218
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11237	32.338	NaN	5404.9	30	0	1780	0.214	+			45040	TVGEVFYTK	9	65	522.2738671262542	1042.5331813193084	2	522.2747192382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVGEVFYTK_	ENSG00000204385|ENST00000229729|SLC44A4;nc|ENSG00000204385|Q53GD3-3|SLC44A4;SLC44A4|p.F618Sfs*25|1|0.43|ENSG00000204385|chr6:31864889-31864889|A/-|frameshift_variant;SLC44A4|p.G398Afs*7|1|0.29|ENSG00000204385|chr6:31869197-31869197|G/-|frameshift_variant;SLC44A4|p.N144Kfs*55|2|0.31|ENSG00000204385|chr6:31874757-31874758|-/T|frameshift_variant;SLC44A4|p.S619Lfs*9|1|0.31|ENSG00000204385|chr6:31864888-31864889|-/A|frameshift_variant	134.7655990226056	0.012935733000282069	5				NaN	NaN	0	NaN	7186	4049	11236
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11238	32.341	NaN	3999.9	30	0	1491.1	0.106			+	20463	KEVLIKAE	8	50	465.2869359315941	928.5593189299882	2	465.2865295410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEVLIKAE_	REV__tr|U7SIR8|U7SIR8_FUSNUATP-dependenthelicaseIRC3OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02152PE=4SV=1	75.04331003522576	0.3648751570195447	5				NaN	NaN	0	NaN	7187	4049	11236
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11239	32.343	NaN	1822.8	30	0	199.35	0.106			+	-1	MKLAGQGL	8	52	438.23662223995325	874.4586915467065	2	438.2359924316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))M(Oxidation (M))KLAGQGL_	REV__MER4E1_dup202|chr3:141941172-141941730:+|1.118986753019194|0.0356289563194822|4.97|477.0|2|1|sense	57.81127852772723	0.5234495074909924	5				NaN	NaN	0	NaN	7188	4049	11236
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11240	32.345	NaN	1426.2	30	0	398.55	0.106	+			26330	LSWKSHLY	8	62	517.2755935351555	NaN	0	517.2747802734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSWKSHLY_	ENST00000498108.5_1_1:225685479-225688852:-|nuORF	42.47446043378293	1.7418937515398478	5				NaN	NaN	0	NaN	7189	4049	11236
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11241	32.347	NaN	1196.2	30	0	193.51	0.106			+	25051	LLKHTAWS	8	44	478.2714934918295	NaN	0	478.2715148925781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LLKHTAWS_	REV__ENSG00000164024|ENST00000296411|METAP1;REV__ENST00000510209.5_1_4:99916904-99957225:+|nuORF;REV__ENST00000513199.5_1_4:99943548-99960531:+|nuORF;REV__METAP1|p.A55Hfs*9|1|0.04|ENSG00000164024|chr4:99028914-99028915|-/CATTTTAAGGAATATT|frameshift_variant	30.503639358989545	1.7418937515398478	5				NaN	NaN	0	NaN	7190	4049	11236
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11242	32.349	NaN	1717.5	30	0	288.68	0.035			+	-1	CLRIKMFV	8	55	513.2853973477803	1024.5562417623605	2	513.2850341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_CLRIKM(Oxidation (M))FV_	REV__ENST00000287474.9_1_1:100195237-100203667:-|nuORF	37.028477286268924	0.6747514403204248	5				NaN	NaN	0	NaN	7191	4049	11236
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11255	32.376	NaN	4347.6	30	0	653.01	0.214	+			5072	ATSKVALVY	9	59	476.2791998373624	950.5438467415248	2	476.2786865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSKVALVY_	ENSG00000110955|ENST00000262030|ATP5F1B	56.72105179125745	0.24094814563026265	5				NaN	NaN	0	NaN	7201	4052	11254
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11256	32.379	NaN	1685.5	30	0	237.47	0.106			+	-1	TLLCWQLY	8	60	548.7762175369912	1095.5378821407824	2	548.7796630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_TLLC(Carbamidomethyl (C))WQLY_	REV__ENST00000572976.5_1_17:79872158-79873644:-|nuORF;REV__ENST00000574992.5_1_17:79873485-79873644:-|nuORF	33.51558372728122	0.7005509609380386	5				NaN	NaN	0	NaN	7202	4052	11254
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11257	32.381	NaN	1684	30	0	245.74	0.034	+			18272	IPHSTLEY	8	57	480.245226615375	958.47590029755	2	480.2452392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IPHSTLEY_	nc|ENSG00000196233|Q96JN0-2|LCOR;nc|ENSG00000196233|Q96JN0|LCOR	52.29916861842294	0.578018602984656	5				NaN	NaN	0	NaN	7203	4052	11254
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11269	32.407	NaN	7719.7	30	0	763.25	0.214	+			35312	SAMKAVTEL	9	64	475.2548368771446	948.4951208210892	2	475.2546691894531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAMKAVTEL_	ENSG00000128245|ENST00000248975|YWHAH	98.58198989935565	0.04066992115528678	5				NaN	NaN	0	NaN	7212	4055	11268
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11270	32.41	NaN	2174.2	30	0	301.27	0.106	+			10281	ETLVEAVNK	9	51	501.7760938662769	1001.5376347993538	2	501.7767028808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ETLVEAVNK_	ENSG00000086102|ENST00000379540|NFX1;ENST00000379521.8_2_9:33290558-33364805:+|nuORF;nc|ENSG00000086102|Q12986-2|NFX1	47.657333605630114	0.33044192980041115	5				NaN	NaN	0	NaN	7213	4055	11268
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11271	32.412	NaN	2396.9	30	0	152.76	0.035			+	8631	EDFSFAWL	8	60	507.7317282276716	1013.4489035221433	2	508.2327575683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EDFSFAWL_	REV__LIPJ|p.F106L|1|0.39|ENSG00000204022|chr10:88594133-88594133|C/A|missense_variant	40.5726180659479	0.6527593143185008	5				NaN	NaN	0	NaN	7214	4055	11268
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11282	32.437	NaN	5914.8	30	0	721.19	0.214	+			50554	YATPIIMDM	9	63	527.7515513030562	1053.4885496729123	2	527.7518920898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YATPIIMDM_	ENSG00000057019|ENST00000326840|DCBLD2;nc|ENSG00000057019|Q96PD2-2|DCBLD2	45.9519527083369	0.35044536499095585	5				NaN	NaN	0	NaN	7222	4058	11281
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11283	32.441	NaN	4618.1	30	0	762.1	0.106				-1	 	0	67	451.27116795970335	450.26389149310336	1	451.2709655761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7223	4058	11281
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11284	32.443	NaN	1860.2	30	0	137.28	0.036			+	32229	QTEKDPWY	8	66	533.7455994014706	1065.476645869741	2	533.7465209960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QTEKDPWY_	REV__SLCO1C1|p.G707D|1|0.35|ENSG00000139155|chr12:20752509-20752509|G/A|missense_variant	31.954861631926434	0.7126016770032289	5				NaN	NaN	0	NaN	7224	4058	11281
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11295	32.468	NaN	2393.2	30	0	831.9	0.142	+			13980	GSATSLVFK	9	48	455.2555369189052	908.4965209046104	2	455.2555847167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSATSLVFK_	ENSG00000227345|ENST00000616448|PARG;PARG|p.D904Tfs*4|1|0.16|ENSG00000227345|chr10:49820231-49820231|C/-|frameshift_variant;PARG|p.N277Mfs*5|3|0.4|ENSG00000227345|chr10:49933618-49933618|T/-|frameshift_variant	49.536043120802724	0.308405419312776	5				NaN	NaN	0	NaN	7232	4061	11294
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11304	32.49	NaN	4296.2	30	0	973.92	0.214	+			44805	TTQVVGILK	9	60	479.80042351585735	957.5862940985147	2	479.7998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTQVVGILK_	ENSG00000198898|ENST00000361183|CAPZA2;ENST00000426421.5_1_7:116544367-116557918:+|nuORF	54.722347961057174	0.257609425301511	5				NaN	NaN	0	NaN	7238	4064	11303
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11305	32.494	NaN	2380.2	30	0	370.83	0.106	+			6147	AVQEFGLAR	9	59	495.7717934447168	989.5290339562337	2	495.77215576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVQEFGLAR_	ENSG00000169230|ENST00000303204|PRELID1;nc|ENSG00000169230|Q9Y255-2|PRELID1	80.45461616416974	0.09558281504443908	5				NaN	NaN	0	NaN	7239	4064	11303
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11306	32.496	NaN	3095.4	30	0	342.24	0.106	+			44271	TSALPIIQK	9	63	485.80032952447436	969.5861061157487	2	485.8001403808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TSALPIIQK_	ENSG00000147872|ENST00000276914|PLIN2;ENST00000472715.1_1_9:19126103-19127487:-|nuORF;ENST00000475923.1_1_9:19126103-19126313:-|nuORF;PLIN2|p.V348*|1|0.15|ENSG00000147872|chr9:19116520-19116520|C/-|frameshift_variant	49.44154591367651	0.3095138337212152	5				NaN	NaN	0	NaN	7240	4064	11303
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11307	32.498	NaN	1995.3	30	0	266.72	0.035			+	34119	RSSEEEEI	8	60	489.7210670371319	977.4275811410638	2	489.7208557128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RSSEEEEI_	REV__ENSG00000136367|ENST00000419474|ZFHX2	65.80317337860623	0.44433089765398776	5				NaN	NaN	0	NaN	7241	4064	11303
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11321	32.527	NaN	3578.5	30	0	1206.9	0.214	+			30799	QEALHTQML	9	57	535.768737145596	1069.522921357992	2	535.7694702148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QEALHTQML_	ENSG00000137076|ENST00000314888|TLN1;nc|ENSG00000137076|Q9Y490-2|TLN1	39.252832667884924	0.4290233611298554	5				NaN	NaN	0	NaN	7252	4067	11320
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11322	32.531	NaN	4547.6	30	0	412.56	0.038	+			34508	RVFVVGVGMTK	11	77	596.8469716523667	1191.6793903715334	2	596.8486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RVFVVGVGMTK_	ENSG00000116171|ENST00000371514|SCP2;ENST00000528311.5_1_1:53392996-53413692:+|nuORF;nc|ENSG00000116171|P22307-3|SCP2;nc|ENSG00000116171|P22307-7|SCP2;nc|ENSG00000116171|P22307-8|SCP2	92.94320115499777	0.08672601920733168	5				NaN	NaN	0	NaN	7253	4067	11320
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11338	32.564	NaN	23367	30	0	8025.8	0.214	+			5151	ATSVITIVK	9	67	466.29479464227575	930.5750363513515	2	466.29443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSVITIVK_	ENSG00000197063|ENST00000357736|MAFG	141.52041321563706	0.009766778904176347	5				NaN	NaN	0	NaN	7266	4070	11337
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11339	32.568	NaN	3525.3	30	0	619.62	0.106			+	25353	LPEWNRLS	8	73	507.77205941609225	1013.5295658989845	2	507.7720947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LPEWNRLS_	REV__ENST00000556356.1_1_12:57598740-57602363:+|nuORF	57.81127852772723	0.5234495074909924	5				NaN	NaN	0	NaN	7267	4070	11337
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11340	32.57	NaN	4208.4	30	0	400.28	0.106	+			36264	SENKLPAEL	9	65	500.76894967908225	999.5233464249645	2	500.76910400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SENKLPAEL_	ENSG00000100823|ENST00000216714|APEX1;ENST00000557159.5_1_14:20924026-20925664:+|nuORF	98.58198989935565	0.04066992115528678	5				NaN	NaN	0	NaN	7268	4070	11337
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11341	32.572	NaN	4559.2	30	0	524.36	0.106	+			34509	RVFVVGVGMTK	11	41	398.2338615563997	1191.679755269399	3	398.23370361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RVFVVGVGMTK_	ENSG00000116171|ENST00000371514|SCP2;ENST00000528311.5_1_1:53392996-53413692:+|nuORF;nc|ENSG00000116171|P22307-3|SCP2;nc|ENSG00000116171|P22307-7|SCP2;nc|ENSG00000116171|P22307-8|SCP2	49.280055037864464	0.43096356235087463	5				NaN	NaN	0	NaN	7269	4070	11337
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11342	32.573	NaN	1345.4	30	0	259.83	0.037			+	44218	TRLSLGAPEPT	11	56	571.3141782862526	1140.6138036393052	2	571.31396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TRLSLGAPEPT_	REV__ENSG00000027869|ENST00000368199|SH2D2A;REV__nc|ENSG00000027869|Q9NP31-2|SH2D2A;REV__nc|ENSG00000027869|Q9NP31-3|SH2D2A;REV__nc|ENSG00000027869|Q9NP31-4|SH2D2A	28.081489160057373	0.6952392775027776	5				NaN	NaN	0	NaN	7270	4070	11337
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11351	32.593	NaN	1431.8	30	0	173.6	0.214			+	48714	VTTRNLGTDS	10	54	532.2709951822892	NaN	0	532.271240234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTTRNLGTDS_	REV__ENSG00000105388|ENST00000221992|CEACAM5;REV__nc|ENSG00000105388|P06731-2|CEACAM5	35.15202426646627	0.38475398474706135	5				NaN	NaN	0	NaN	7276	4073	11350
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11352	32.597	NaN	2738.7	30	0	154.19	0.106			+	13905	GRKASALSDQ	10	69	516.7760765595424	1031.5376001858847	2	516.7752075195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GRKASALSDQ_	REV__ENSG00000173548|ENST00000308527|SNX33;REV__SNX33|p.C435Afs*62|2|0.36|ENSG00000173548|chr15:75650395-75650395|C/-|frameshift_variant;REV__SNX33|p.G409Afs*88|1|0.33|ENSG00000173548|chr15:75650323-75650323|G/-|frameshift_variant	47.95952297671804	0.47580206326914537	5				NaN	NaN	0	NaN	7277	4073	11350
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11353	32.599	NaN	1171.1	30	0	193.98	0.106	+			26347	LTAATLPKV	9	48	457.28896971351685	NaN	0	457.28900146484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LTAATLPKV_	ENST00000595443.5_1_19:39327988-39329682:-|nuORF	20.94693142431847	0.3660861156085067	5				NaN	NaN	0	NaN	7278	4073	11350
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11354	32.601	NaN	1715.5	30	0	225.24	0.036	+			50670	YEEEMREL	8	57	549.7424015511926	NaN	0	549.7424926757812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YEEEMREL_	ENSG00000026025|ENST00000544301|VIM;ENST00000485947.1_1_10:17271421-17272784:+|nuORF	44.377184641726394	1.7418937515398478	5				NaN	NaN	0	NaN	7279	4073	11350
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11362	32.621	NaN	2070.6	30	0	205.25	0.214			+	31007	QESLRYVY	8	55	529.2693176629434	1056.5240823926868	2	529.2694091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QESLRYVY_	REV__ENSG00000083457|ENST00000263087|ITGAE;REV__ITGAE|p.I909Lfs*19|1|0.09|ENSG00000083457|chr17:3732398-3732398|C/-|frameshift_variant;REV__ITGAE|p.L601Pfs*8|1|0.31|ENSG00000083457|chr17:3751741-3751742|-/G|frameshift_variant	71.37791200682192	0.3954169775488141	5				NaN	NaN	0	NaN	7284	4076	11361
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11363	32.624	NaN	2118.5	30	0	231.26	0.106	+			12082	GAAKKPPVTFA	11	68	543.819017524442	1085.6234821156838	2	543.8202514648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GAAKKPPVTFA_	ENSG00000137699|ENST00000341846|TRIM29;nc|ENSG00000137699|Q14134-2|TRIM29;TRIM29|p.E403Rfs*7|1|0.16|ENSG00000137699|chr11:120125817-120125817|C/-|frameshift_variant	28.081489160057373	0.6952392775027776	5				NaN	NaN	0	NaN	7285	4076	11361
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11364	32.626	NaN	1530.2	30	0	141.15	0.035	+			45330	TVSGIQVRY	9	50	511.7846997263386	1021.5548465194772	2	512.2847900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVSGIQVRY_	ENSG00000129354|ENST00000250244|AP1M2;nc|ENSG00000129354|Q9Y6Q5-2|AP1M2	49.44154591367651	0.3095138337212152	5				NaN	NaN	0	NaN	7286	4076	11361
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11372	32.646	NaN	2745.3	30	0	260.31	0.214	+			10288	ETNATTLLL	9	62	488.2712981531869	NaN	0	488.2715148925781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ETNATTLLL_	DPP10|p.I438Ffs*4|2|0.31|ENSG00000175497|chr2:115777293-115777293|A/-|frameshift_variant;DPP10|p.L441Sfs*4|1|0.21|ENSG00000175497|chr2:115777790-115777791|-/T|frameshift_variant;ENSG00000175497|ENST00000410059|DPP10;nc|ENSG00000175497|Q8N608-2|DPP10;nc|ENSG00000175497|Q8N608-3|DPP10;nc|ENSG00000175497|Q8N608-4|DPP10	37.81151784470057	0.28666463014928195	5				NaN	NaN	0	NaN	7291	4079	11371
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11373	32.649	NaN	1856.1	30	0	469.76	0.106	+			51097	YLSLSDKI	8	54	469.7633735213783	937.5121941095566	2	469.76348876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YLSLSDKI_	ENSG00000168491|ENST00000307588|CCDC110;nc|ENSG00000168491|Q8TBZ0-2|CCDC110	38.80614096846853	0.6637206697844082	5				NaN	NaN	0	NaN	7292	4079	11371
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11374	32.651	NaN	1630.7	30	0	152.58	0.106			+	21344	KLWSIDLI	8	61	494.29921535901485	NaN	0	494.2994079589844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KLWSIDLI_	REV__ENST00000420967.5_1_12:118454632-118456902:+|nuORF	44.116797842482775	1.7418937515398478	5				NaN	NaN	0	NaN	7293	4079	11371
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11375	32.653	NaN	1226.8	30	0	96.296	0.04				-1	MQKRKLPMLQ	10	59	665.8681969175949	NaN	0	665.8677368164062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))MQKRKLPM(Oxidation (M))LQ_	ENST00000545335.5_2_10:22826185-22828949:-|nuORF	37.81151784470057	0.3760215235790741	5				NaN	NaN	0	NaN	7294	4079	11371
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11386	32.677	NaN	3623.9	30	0	399.53	0.214	+			10801	FAKGGNLTL	9	63	460.7632792773749	919.5120056215499	2	460.7635192871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FAKGGNLTL_	ENSG00000035115|ENST00000356150|SH3YL1;ENST00000497051.5_1_2:233054-249752:-|nuORF;nc|ENSG00000035115|Q96HL8-2|SH3YL1;nc|ENSG00000035115|Q96HL8-3|SH3YL1;nc|ENSG00000035115|Q96HL8-4|SH3YL1	99.37495909608758	0.03983967222258828	5				NaN	NaN	0	NaN	7302	4082	11385
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11387	32.681	NaN	3802.3	30	0	1029.8	0.106			+	6745	CDALGLPNTP	10	61	500.741130321647	999.467707710094	2	500.7420349121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_CDALGLPNTP_	REV__ENST00000428388.6_1_6:32135427-32135845:+|nuORF;REV__ENST00000489721.1_1_6:32135321-32135845:+|nuORF	60.11826168202944	0.36476464221954025	5				NaN	NaN	0	NaN	7303	4082	11385
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11388	32.683	NaN	1240.1	30	0	159.52	0.106	+			156	AAIEASQSL	9	49	445.234760735188	NaN	0	445.2348327636719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AAIEASQSL_	ENSG00000168297|ENST00000356151|PXK;nc|ENSG00000168297|Q7Z7A4-2|PXK;nc|ENSG00000168297|Q7Z7A4-4|PXK;nc|ENSG00000168297|Q7Z7A4-6|PXK	68.84614121027924	0.11159004992091766	5				NaN	NaN	0	NaN	7304	4082	11385
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11389	32.684	NaN	2329.1	30	0	410.12	0.106	+			47869	VSLGLAVSK	9	54	437.27357067590737	NaN	0	437.2739562988281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSLGLAVSK_	ENSG00000018869|ENST00000586929|ZNF582;ENSG00000197302|ENST00000316491|KRBOX5;ENSG00000197566|ENST00000311331|ZNF624;ENST00000529943.6_1_16:31724760-31765604:+|nuORF;ENST00000534277.5_1_16:31724760-31767037:+|nuORF;ENST00000579983.1_1_17:16534952-16537956:-|nuORF;ZNF624|p.I325Nfs*9|1|0.21|ENSG00000197566|chr17:16623912-16623913|-/T|frameshift_variant;ZNF624|p.I325Sfs*167|1|0.46|ENSG00000197566|chr17:16623913-16623913|T/-|frameshift_variant;ZNF624|p.K498Nfs*74|1|0.49|ENSG00000197566|chr17:16623392-16623392|T/-|frameshift_variant;ZNF624|p.K666Nfs*130|1|0.46|ENSG00000197566|chr17:16622888-16622888|T/-|frameshift_variant;ZNF624|p.K787Ifs*14|1|0.11|ENSG00000197566|chr17:16622526-16622527|-/ATAAATGTAATGAA|frameshift_variant	90.60085204095205	0.040385177724871185	5				NaN	NaN	0	NaN	7305	4082	11385
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11390	32.686	NaN	2005.1	30	0	129.26	0.106	+			39810	STLESIYQR	9	61	548.7853552938997	1095.5561576545992	2	548.78515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STLESIYQR_	ENSG00000166888|ENST00000300134|STAT6;ENST00000555641.1_1_12:57499966-57502061:-|nuORF;STAT6|p.G815Efs*27|3|0.31|ENSG00000166888|chr12:57096672-57096672|C/-|frameshift_variant	85.16082228582465	0.07850854922700509	5				NaN	NaN	0	NaN	7306	4082	11385
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11391	32.688	NaN	1777.7	30	0	147.12	0.106	+			6056	AVMISAIEK	9	57	481.27270150543995	960.5308500776799	2	481.2730712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AVMISAIEK_	ENSG00000189091|ENST00000302516|SF3B3;nc|ENSG00000189091|Q15393-2|SF3B3	45.97224482568171	0.3502073465782774	5				NaN	NaN	0	NaN	7307	4082	11385
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11392	32.69	NaN	933.04	30	0	58.483	0.04			+	-1	SRQSQVNLCPH	11	57	684.3276915878545	NaN	0	684.32666015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))SRQSQVNLC(Carbamidomethyl (C))PH_	REV__AKAP11|p.N1230H|1|0.17|ENSG00000023516|chr13:42302434-42302434|A/C|missense_variant	35.15202426646627	0.40875833226131825	5				NaN	NaN	0	NaN	7308	4082	11385
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11401	32.71	NaN	26580	30	0	3839.4	0.214	+			50466	YAEVGRVL	8	71	453.7554382001697	905.4963234671394	2	453.7555236816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YAEVGRVL_	ANKRD17|p.L2249Yfs*84|1|0.34|ENSG00000132466|chr4:73090884-73090884|G/-|frameshift_variant;ENSG00000131503|ENST00000360839|ANKHD1;ENSG00000132466|ENST00000358602|ANKRD17;ENST00000514252.1_1_4:73978989-74017230:-|nuORF;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1;nc|ENSG00000132466|O75179-2|ANKRD17;nc|ENSG00000132466|O75179-6|ANKRD17;nc|ENSG00000132466|O75179-7|ANKRD17	104.74654710444128	0.24806011021879068	5				NaN	NaN	0	NaN	7314	4085	11400
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11402	32.713	NaN	10167	30	0	1025.4	0.106	+			12999	GEVDPKVAL	9	64	464.2608977964329	926.5072426596658	2	464.2605895996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEVDPKVAL_	ENSG00000099795|ENST00000215565|NDUFB7;ENST00000593353.5_1_19:14676947-14682853:-|nuORF	77.31757898189308	0.1091473830098891	5				NaN	NaN	0	NaN	7315	4085	11400
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11403	32.715	NaN	2358.5	30	0	346.37	0.106	+			49618	VYGVSKETF	9	62	515.2656576884341	1028.516762443668	2	515.2662353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYGVSKETF_	ENSG00000164292|ENST00000379982|RHOBTB3;RHOBTB3|p.K539Rfs*53|1|0.25|ENSG00000164292|chr5:95783952-95783952|A/-|frameshift_variant	78.26377905018397	0.10505600812668463	5				NaN	NaN	0	NaN	7316	4085	11400
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11404	32.717	NaN	3166.1	30	0	1343.6	0.106			+	43489	TGPIPLAPNFG	11	35	361.865869395741	1082.5757787874231	3	361.86566162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TGPIPLAPNFG_	REV__tr|U7STU4|U7STU4_FUSNURadicalSAMcoredomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00985PE=4SV=1	20.94693142431847	0.7700749696703488	5				NaN	NaN	0	NaN	7317	4085	11400
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11405	32.719	NaN	1633.2	30	0	157.25	0.106			+	45666	TYVSSLGSIL	10	56	520.2868556311369	1038.5591583290736	2	520.2880249023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TYVSSLGSIL_	REV__ENSG00000176087|ENST00000323146|SLC35A4	42.396135135203025	0.5270658956260207	5				NaN	NaN	0	NaN	7318	4085	11400
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11406	32.721	NaN	1970.3	30	0	188.36	0.106	+			50420	YAATIASKL	9	54	469.27106112228415	936.5275693113683	2	469.2704162597656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YAATIASKL_	ENSG00000102554|ENST00000377687|KLF5;nc|ENSG00000102554|Q13887-2|KLF5;nc|ENSG00000102554|Q13887-4|KLF5	82.7504851949679	0.08565546331141553	5				NaN	NaN	0	NaN	7319	4085	11400
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11407	32.723	NaN	1999.1	30	0	463.52	0.035			+	18649	ISTSRPTSF	9	58	498.2609880646966	994.5074231961933	2	498.2611389160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ISTSRPTSF_	REV__ENST00000456894.5_1_22:39150683-39150851:-|nuORF	65.46538089061403	0.16805504838372562	5				NaN	NaN	0	NaN	7320	4085	11400
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11419	32.748	NaN	6900.6	30	0	1730.4	0.214	+			24231	LESKGLTL	8	58	430.7580665962367	859.5015802592734	2	430.75775146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LESKGLTL_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;CLCA4|p.S847Kfs*4|1|0.28|ENSG00000016602|chr1:86580120-86580121|-/A|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1;ENSG00000016602|ENST00000370563|CLCA4	87.69643885390035	0.28444366722805053	5				NaN	NaN	0	NaN	7329	4088	11418
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11420	32.752	NaN	1591.2	30	0	175.45	0.106			+	28567	NKFTNDLI	8	57	482.7585322119989	NaN	0	482.75897216796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NKFTNDLI_	REV__tr|U7SKU9|U7SKU9_FUSNUNTEfamilyproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01940PE=4SV=1	42.396135135203025	1.7418937515398478	5				NaN	NaN	0	NaN	7330	4088	11418
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11421	32.754	NaN	1735.8	30	0	199.88	0.034	+			28722	NNLQLELN	8	58	479.25395018202454	NaN	0	479.2541198730469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NNLQLELN_	tr|U7SM68|U7SM68_FUSNUOutermembraneproteinTolCOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02098PE=3SV=1	31.954861631926434	1.7418937515398478	5				NaN	NaN	0	NaN	7331	4088	11418
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11435	32.783	NaN	6002.3	30	0	823.67	0.214				-1	SECGKAFSL	9	71	499.73409600566686	997.4536390781337	2	499.7340087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SEC(Carbamidomethyl (C))GKAFSL_	ENSG00000106261|ENST00000324306|ZKSCAN1;ENSG00000186230|ENST00000334181|ZNF749;ENSG00000186272|ENST00000307658|ZNF17;ENSG00000186812|ENST00000330501|ZNF397;ENSG00000198393|ENST00000328654|ZNF26;ENST00000602050.1_1_19:57930944-57932846:+|nuORF;nc|ENSG00000186272|P17021-3|ZNF17;nc|ENSG00000186272|P17021|ZNF17;ZNF852|p.G393S|1|0.24|ENSG00000178917|chr3:44499600-44499600|C/T|missense_variant	58.2462437865262	0.22823408064396822	5				NaN	NaN	0	NaN	7342	4091	11434
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11436	32.786	NaN	3483.4	30	0	476.37	0.106				-1	SGKERDRR	8	64	523.2800588125705	1044.5455646919409	2	523.2801513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SGKERDRR_	ENSG00000163904|ENST00000296257|SENP2;nc|ENSG00000163904|Q9HC62-2|SENP2;SENP2|p.D364N|1|0.38|ENSG00000163904|chr3:185614720-185614720|G/A|missense_variant;SENP2|p.P433Sfs*17|1|0.08|ENSG00000163904|chr3:185619352-185619353|-/AGTAGAAG|frameshift_variant	51.19269402634007	0.5868595481438337	5				NaN	NaN	0	NaN	7343	4091	11434
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11437	32.788	NaN	2418.1	30	0	325.62	0.106	+			13784	GQGVSSLPYF	10	63	527.7636702823149	1053.5127876314298	2	527.7636108398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GQGVSSLPYF_	ENST00000550178.1_1_12:120934019-120934079:+|nuORF	47.657333605630114	0.47858658696240314	5				NaN	NaN	0	NaN	7344	4091	11434
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11438	32.79	NaN	1604	30	0	290.32	0.106	+			51209	YPQPPSQSY	9	55	533.7455994014706	1065.476645869741	2	533.7457275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YPQPPSQSY_	ENSG00000138279|ENST00000372921|ANXA7;nc|ENSG00000138279|P20073|ANXA7	52.936696900407355	0.27249468807391813	5				NaN	NaN	0	NaN	7345	4091	11434
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11439	32.792	NaN	3954.6	30	0	1973.8	0.106	+			32478	QVMSLGLQK	9	60	502.2837787385555	1002.553004543911	2	502.28289794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QVMSLGLQK_	ENST00000314423.11_1_16:69166475-69170710:+|nuORF;ENST00000562237.5_1_16:69166520-69170710:+|nuORF	69.6276240434122	0.14239879520340665	5				NaN	NaN	0	NaN	7346	4091	11434
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11440	32.794	NaN	1879.5	30	0	230.69	0.034	+			47447	VPVALADPH	9	50	459.7557013766173	917.4968498200346	2	459.7557373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VPVALADPH_	ENSG00000102302|ENST00000375135|FGD1;FGD1|p.P859Lfs*4|1|0.34|ENSG00000102302|chrX:54447315-54447315|G/-|frameshift_variant	50.0245360154114	0.3026755932229825	5				NaN	NaN	0	NaN	7347	4091	11434
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11441	32.794	NaN	856.72	30	0	62.853	0.142			+	41226	SVLETLVRDF	10	51	589.8252563476562	NaN	0	589.8252563476562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVLETLVRDF_	REV__ENSG00000143171|ENST00000359842|RXRG;REV__ENSG00000186350|ENST00000481739|RXRA;REV__ENSG00000204231|ENST00000374680|RXRB;REV__nc|ENSG00000186350|P19793-2|RXRA	38.753607047826485	0.3729281687199363	5				NaN	NaN	0	NaN	7348	4091	11434
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11458	32.831	NaN	5413	30	0	1048.2	0.214			+	6411	AVVNTPQLI	9	63	477.78478308923536	953.5550132452707	2	477.78448486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVVNTPQLI_	REV__ADGRV1|p.F5465Lfs*13|1|0.26|ENSG00000164199|chr5:90828964-90828964|T/-|frameshift_variant;REV__ADGRV1|p.T5738Pfs*48|1|0.19|ENSG00000164199|chr5:90853288-90853288|A/-|frameshift_variant;REV__ENSG00000164199|ENST00000405460|ADGRV1;REV__nc|ENSG00000164199|Q8WXG9-2|ADGRV1	65.80317337860623	0.1652391959156183	5				NaN	NaN	0	NaN	7362	4094	11457
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11459	32.835	NaN	1315.8	30	0	95.123	0.106			+	37829	SMTKKSLQ	8	53	461.7530406937339	NaN	0	461.7530212402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SMTKKSLQ_	REV__CEP290|p.N212Tfs*14|4|0.21|ENSG00000198707|chr12:88130302-88130302|T/-|frameshift_variant	35.61828744233558	1.7418937515398478	5				NaN	NaN	0	NaN	7363	4094	11457
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11460	32.837	NaN	2872.1	30	0	1165.6	0.106			+	25112	LLPRPQLSAP	10	38	364.5573898168389	1090.6503400507167	3	364.5574951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LLPRPQLSAP_	REV__ENST00000566611.5_1_16:57786453-57787143:+|nuORF	30.317721548370564	0.6322445173429027	5				NaN	NaN	0	NaN	7364	4094	11457
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11461	32.839	NaN	1768.9	30	0	186.04	0.106	+			10629	EYNSDLHQF	9	56	576.7513053992626	1151.4880578653251	2	576.7516479492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EYNSDLHQF_	BUB1|p.V819Gfs*61|1|0.11|ENSG00000169679|chr2:110642126-110642127|-/C|frameshift_variant;ENSG00000169679|ENST00000302759|BUB1;ENST00000465029.5_1_2:111419157-111435602:-|nuORF;nc|ENSG00000169679|O43683-2|BUB1;nc|ENSG00000169679|O43683-3|BUB1	90.60085204095205	0.06317133949006545	5				NaN	NaN	0	NaN	7365	4094	11457
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11462	32.84	NaN	706.7	30	0	63.647	0.106			+	17891	IGDRSLIV	8	42	436.7637023925781	NaN	0	436.7637023925781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IGDRSLIV_	REV__ENSG00000179397|ENST00000366534|CATSPERE;REV__nc|ENSG00000179397|Q5SY80-2|CATSPERE;REV__nc|ENSG00000179397|Q5SY80-3|CATSPERE	31.954861631926434	1.7418937515398478	5				NaN	NaN	0	NaN	7366	4094	11457
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11463	32.842	NaN	1765	30	0	137.61	0.038				-1	SFKMKMSVIL	10	42	400.556216891783	NaN	0	400.8901672363281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_SFKM(Oxidation (M))KMSVIL_	ENSG00000033627|ENST00000343619|ATP6V0A1;ENSG00000110719|ENST00000265686|TCIRG1;ENSG00000185344|ENST00000330342|ATP6V0A2;ENST00000533005.5_1_11:67811756-67818283:+|nuORF;nc|ENSG00000033627|Q93050-1|ATP6V0A1;nc|ENSG00000033627|Q93050-3|ATP6V0A1;nc|ENSG00000110719|Q13488-2|TCIRG1	37.50817390946774	0.3770175549877019	5				NaN	NaN	0	NaN	7367	4094	11457
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11464	32.843	NaN	1474	30	0	134.41	0.14	+			631	ADVPAPACAAE	11	61	507.7317282276716	1013.4489035221433	2	507.732177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ADVPAPACAAE_	ENSG00000164440|ENST00000358430|TXLNB	49.536043120802724	0.4274608637932522	5				NaN	NaN	0	NaN	7368	4094	11457
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11477	32.872	NaN	244170	30	0	47165	0.135	+			44272	TSALPIIQK	9	83	485.80032952447436	969.5861061157487	2	485.8005676269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSALPIIQK_	ENSG00000147872|ENST00000276914|PLIN2;ENST00000472715.1_1_9:19126103-19127487:-|nuORF;ENST00000475923.1_1_9:19126103-19126313:-|nuORF;PLIN2|p.V348*|1|0.15|ENSG00000147872|chr9:19116520-19116520|C/-|frameshift_variant	176.08678752253132	0.0017279326439731339	5				NaN	NaN	0	NaN	7378	4097	11476
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11478	32.875	NaN	20272	30	0	4434.7	0.106	+			6289	AVSTFAMVK	9	71	477.25985070574353	952.5051484782871	2	477.2597961425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVSTFAMVK_	ENSG00000172893|ENST00000355527|DHCR7;ENST00000534701.1_1_11:71149825-71152361:-|nuORF	118.74307786436346	0.02196067127630568	5				NaN	NaN	0	NaN	7379	4097	11476
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11479	32.877	NaN	37217	30	0	7431.5	0.106	+			39505	STFNQVVLK	9	77	518.2953809765813	1034.5762090199626	2	518.296142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STFNQVVLK_	ENSG00000063177|ENST00000549920|RPL18;ENST00000478088.1_1_16:76269257-76269449:-|nuORF;ENST00000547892.1_1_19:49120227-49120731:-|nuORF;ENST00000552347.5_1_19:49120227-49122400:-|nuORF;ENST00000552705.5_1_19:49119841-49122400:-|nuORF;ENST00000552851.1_1_19:49119841-49122400:-|nuORF;nc|ENSG00000063177|Q07020-2|RPL18	214.23057602635166	3.58823238688865E-08	5				NaN	NaN	0	NaN	7380	4097	11476
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11480	32.879	NaN	4410.2	30	0	448.16	0.106	+			42855	TEFTNKNML	9	60	549.2670678401267	1096.5195827470534	2	549.2684936523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TEFTNKNML_	ENSG00000167600|ENST00000310054|CYP2S1;nc|ENSG00000167600|Q96SQ9-2|CYP2S1	95.81516180277367	0.04847050768394289	5				NaN	NaN	0	NaN	7381	4097	11476
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11481	32.88	NaN	3021.6	30	0	392.5	0.106	+			12704	GEKQPELQI	9	68	521.282262727186	1040.5499725211719	2	521.2824096679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GEKQPELQI_	ENSG00000101347|ENST00000646673|SAMHD1;nc|ENSG00000101347|Q9Y3Z3-3|SAMHD1;nc|ENSG00000101347|Q9Y3Z3-4|SAMHD1	66.96192283764107	0.15557981141143568	5				NaN	NaN	0	NaN	7382	4097	11476
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11482	32.882	NaN	1587	30	0	130.55	0.106			+	-1	MAGPYSITVK	10	65	541.7820699715824	1081.5495870099646	2	541.78076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_M(Oxidation (M))AGPYSITVK_	REV__ENSG00000177084|ENST00000320574|POLE;REV__ENST00000537064.5_1_12:133235217-133253139:-|nuORF;REV__POLE|p.A2030Pfs*18|1|0.14|ENSG00000177084|chr12:132632712-132632712|C/-|frameshift_variant;REV__POLE|p.K1170Nfs*49|1|0.15|ENSG00000177084|chr12:132657208-132657208|T/-|frameshift_variant	40.77816245573522	0.5419747034533848	5				NaN	NaN	0	NaN	7383	4097	11476
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11483	32.884	NaN	1435.5	30	0	618.04	0.035			+	-1	MLQPLHLQ	8	31	332.51511214623184	994.5235070388956	3	332.5149841308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_M(Oxidation (M))LQPLHLQ_	REV__ENSG00000127124|ENST00000372583|HIVEP3;REV__HIVEP3|p.G2228Vfs*5|1|0.27|ENSG00000127124|chr1:41510989-41510989|C/-|frameshift_variant;REV__nc|ENSG00000127124|Q5T1R4-2|HIVEP3	21.9598887501803	0.7897753010812679	5				NaN	NaN	0	NaN	7384	4097	11476
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11495	32.91	NaN	224430	30	0	90059	0.173	+			14996	GTMTGMLYK	9	91	501.24317158404176	1000.4717902348835	2	501.2438049316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTMTGMLYK_	ENSG00000178440|ENST00000651763|TIMM23B-AGAP6;ENSG00000204152|ENST00000651259|TIMM23B;ENSG00000265354|ENST00000580018|TIMM23;nc|ENSG00000204152|Q5SRD1-2|TIMM23B	143.8867514904718	0.008656634767784652	5				NaN	NaN	0	NaN	7393	4100	11494
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11496	32.913	NaN	5539.6	30	0	628.55	0.106	+			43504	TGSEFVDTK	9	58	492.2377462942201	982.4609396552402	2	492.2381591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TGSEFVDTK_	ABCC12|p.M936Yfs*84|1|0.32|ENSG00000140798|chr16:48104236-48104237|-/A|frameshift_variant;ABCC12|p.R1075Cfs*54|1|0.38|ENSG00000140798|chr16:48091182-48091183|-/CA|frameshift_variant;ENSG00000140798|ENST00000311303|ABCC12;nc|ENSG00000140798|Q96J65-2|ABCC12;nc|ENSG00000140798|Q96J65-3|ABCC12;nc|ENSG00000140798|Q96J65|ABCC12	44.377184641726394	0.36891676396732553	5				NaN	NaN	0	NaN	7394	4100	11494
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11497	32.914	NaN	4816.3	30	0	2273.2	0.106	+			43109	TERDLREVF	9	46	388.87182411919554	1163.5936429577866	3	388.87176513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TERDLREVF_	ENSG00000136527|ENST00000453386|TRA2B;ENSG00000164548|ENST00000297071|TRA2A;ENST00000494255.5_1_7:23547037-23556014:-|nuORF;nc|ENSG00000136527|P62995-3|TRA2B;nc|ENSG00000164548|Q13595-2|TRA2A;nc|ENSG00000164548|Q13595-3|TRA2A;nc|ENSG00000164548|Q13595-4|TRA2A	30.317721548370564	0.5199124245378496	5				NaN	NaN	0	NaN	7395	4100	11494
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11498	32.916	NaN	1689.3	30	0	263.31	0.106			+	24411	LGALEVDTT	9	49	459.74213511089386	NaN	0	459.7422180175781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LGALEVDTT_	REV__ENSG00000176986|ENST00000345254|SEC24C;REV__nc|ENSG00000176986|P53992-2|SEC24C	55.50420428727701	0.16876052142120426	5				NaN	NaN	0	NaN	7396	4100	11494
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11499	32.918	NaN	1679.9	30	0	860.49	0.106				-1	MAVLKERAL	9	27	349.5391596723839	1045.5956496173517	3	349.8731994628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_M(Oxidation (M))AVLKERAL_	ENSG00000151577|ENST00000383673|DRD3;nc|ENSG00000151577|P35462-3|DRD3	19.996771675451527	0.6112419832031292	5				NaN	NaN	0	NaN	7397	4100	11494
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11500	32.92	NaN	2139.3	30	0	218.18	0.106	+			2577	AQENVKVVY	9	52	525.2850380460073	1048.5555231588146	2	525.285888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AQENVKVVY_	ENSG00000205726|ENST00000381318|ITSN1;ITSN1|p.P1076Tfs*2|1|0.25|ENSG00000205726|chr21:33826852-33826853|-/A|frameshift_variant;nc|ENSG00000205726|Q15811-10|ITSN1;nc|ENSG00000205726|Q15811-11|ITSN1;nc|ENSG00000205726|Q15811-12|ITSN1;nc|ENSG00000205726|Q15811-13|ITSN1;nc|ENSG00000205726|Q15811-2|ITSN1;nc|ENSG00000205726|Q15811-3|ITSN1;nc|ENSG00000205726|Q15811-4|ITSN1;nc|ENSG00000205726|Q15811-5|ITSN1;nc|ENSG00000205726|Q15811-6|ITSN1;nc|ENSG00000205726|Q15811-7|ITSN1;nc|ENSG00000205726|Q15811-8|ITSN1;nc|ENSG00000205726|Q15811-9|ITSN1	60.11826168202944	0.21262886028301267	5				NaN	NaN	0	NaN	7398	4100	11494
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11501	32.922	NaN	684.7	30	0	199.53	0.036			+	43535	TGVTIIHQY	9	21	344.5223270411144	NaN	0	344.52227783203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TGVTIIHQY_	REV__ENSG00000198354|ENST00000360028|DCAF12L2	12.959181472943097	0.3931207604263714	5				NaN	NaN	0	NaN	7399	4100	11494
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11515	32.95	NaN	2684.5	30	0	184.39	0.214	+			43110	TERDLREVF	9	62	582.8042394096442	1163.5939258860883	2	582.8045654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TERDLREVF_	ENSG00000136527|ENST00000453386|TRA2B;ENSG00000164548|ENST00000297071|TRA2A;ENST00000494255.5_1_7:23547037-23556014:-|nuORF;nc|ENSG00000136527|P62995-3|TRA2B;nc|ENSG00000164548|Q13595-2|TRA2A;nc|ENSG00000164548|Q13595-3|TRA2A;nc|ENSG00000164548|Q13595-4|TRA2A	33.921630207806714	0.48623198279849766	5				NaN	NaN	0	NaN	7410	4103	11514
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11516	32.954	NaN	1502.7	30	0	449.7	0.106	+			14521	GTDKLWAGL	9	51	480.7608023269925	NaN	0	480.76104736328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTDKLWAGL_	ENSG00000179846|ENST00000686631|NKPD1;nc|ENSG00000179846|Q17RQ9|NKPD1;NKPD1|p.L170Cfs*14|1|0.31|ENSG00000179846|chr19:45153264-45153264|C/-|frameshift_variant	62.107414245175825	0.1403307765918332	5				NaN	NaN	0	NaN	7411	4103	11514
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11517	32.956	NaN	1184.8	30	0	122.21	0.106				-1	LYSCAVHS	8	49	468.71378162600405	NaN	0	468.2542724609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LYSC(Carbamidomethyl (C))AVHS_	ENSG00000133943|ENST00000256324|DGLUCY;nc|ENSG00000133943|Q7Z3D6-3|DGLUCY;nc|ENSG00000133943|Q7Z3D6-4|DGLUCY;nc|ENSG00000133943|Q7Z3D6-5|DGLUCY;nc|ENSG00000133943|Q7Z3D6|DGLUCY	35.200714571348534	1.7418937515398478	5				NaN	NaN	0	NaN	7412	4103	11514
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11518	32.957	NaN	1205.7	30	0	113.08	0.037	+			10386	EVCRRYLW	8	48	562.787077629468	NaN	0	562.7866821289062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EVCRRYLW_	ENSG00000138646|ENST00000264350|HERC5;ENST00000502913.1_1_4:89394186-89425581:+|nuORF;ENST00000510223.5_1_4:89394995-89425581:+|nuORF	30.503639358989545	1.7418937515398478	5				NaN	NaN	0	NaN	7413	4103	11514
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11530	32.983	NaN	12063	30	0	2678.8	0.214	+			11326	FLAVRSSY	8	63	471.75580281823915	941.4970527032783	2	471.755126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FLAVRSSY_	ENST00000296328.8_1_3:196089371-196089518:-|nuORF	82.30502934623384	0.30436709589983096	5				NaN	NaN	0	NaN	7422	4106	11529
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11531	32.986	NaN	6426.3	30	0	764.08	0.106	+			36525	SFEDAKEAL	9	75	505.24538337604963	1008.4762138188993	2	505.24493408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SFEDAKEAL_	ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232319904-232323320:-|nuORF	98.58198989935565	0.04066992115528678	5				NaN	NaN	0	NaN	7423	4106	11529
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11532	32.988	NaN	5207.4	30	0	972.37	0.106	+			17508	IDIKGKDVY	9	76	525.7947425292823	1049.5749321253645	2	525.7942504882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IDIKGKDVY_	tr|U7SRG6|U7SRG6_FUSNULong-chainacyl-CoAsynthetaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01594PE=4SV=1	64.20726635412375	0.17854274437659667	5				NaN	NaN	0	NaN	7424	4106	11529
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11533	32.99	NaN	2527.1	30	0	151.41	0.106	+			19915	KEFDGKSLVSV	11	69	604.8297330941656	1207.644913255131	2	604.8300170898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEFDGKSLVSV_	ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;ENST00000517330.1_1_5:77337712-77337985:-|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P;nc|ENSG00000205940|Q58FF8|HSP90AB2P	60.69067153575145	0.31728992743641143	5				NaN	NaN	0	NaN	7425	4106	11529
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11534	32.992	NaN	1006.4	30	0	142.68	0.106	+			17011	HPTMTAAL	8	39	421.21545033690165	840.4163477406033	2	421.2149963378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HPTMTAAL_	ENSG00000142185|ENST00000397928|TRPM2;nc|ENSG00000142185|O94759-2|TRPM2;nc|ENSG00000142185|O94759-3|TRPM2;TRPM2|p.A785Rfs*17|1|0.49|ENSG00000142185|chr21:44401707-44401707|C/-|frameshift_variant;TRPM2|p.V508Cfs*3|1|0.06|ENSG00000142185|chr21:44391350-44391350|G/-|frameshift_variant	33.51558372728122	0.7005509609380386	5				NaN	NaN	0	NaN	7426	4106	11529
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11535	32.994	NaN	1148.2	30	0	93.097	0.037			+	50315	WTEPQVSLLA	10	60	572.304188426955	1142.5938239207098	2	572.3057861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_WTEPQVSLLA_	REV__ENST00000258080.7_1_2:74758074-74758736:+|nuORF;REV__ENST00000465521.1_1_2:74758074-74758257:+|nuORF;REV__ENST00000484352.5_1_2:74758074-74758502:+|nuORF	44.377184641726394	0.5088115166961078	5				NaN	NaN	0	NaN	7427	4106	11529
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11536	32.995	NaN	1481.2	30	0	271.21	0.14				-1	SVSTNHVCI	9	57	508.74627685546875	NaN	0	508.74627685546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_SVSTNHVC(Carbamidomethyl (C))I_	ENST00000557732.1_1_14:90744682-90745540:-|nuORF	35.61828744233558	0.29773779453147337	5				NaN	NaN	0	NaN	7428	4106	11529
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11547	33.02	NaN	1063.9	30	0	430.99	0.215			+	6963	CPPLRRWR	8	33	361.8698425292969	NaN	0	361.8698425292969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CPPLRRWR_	REV__ENSG00000099949|ENST00000646124|LZTR1	24.20275056022122	1.7418937515398478	5				NaN	NaN	0	NaN	7436	4109	11546
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11548	33.024	NaN	2087.1	30	0	264.83	0.106	+			41231	SVLEVVSEK	9	61	495.27943167621794	988.5443104192359	2	495.27996826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVLEVVSEK_	ENSG00000125885|ENST00000610722|MCM8;nc|ENSG00000125885|Q9UJA3-2|MCM8;nc|ENSG00000125885|Q9UJA3-3|MCM8;nc|ENSG00000125885|Q9UJA3-4|MCM8	54.722347961057174	0.257609425301511	5				NaN	NaN	0	NaN	7437	4109	11546
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11549	33.025	NaN	1483.2	30	0	202.7	0.106			+	-1	KSLAEPGPILP	11	52	582.3376717521861	NaN	0	582.3384399414062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))KSLAEPGPILP_	REV__nc|ENSG00000198930|Q6PB30-2|CSAG1	18.531049691330335	0.456735970842152	5				NaN	NaN	0	NaN	7438	4109	11546
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11550	33.027	NaN	2387	30	0	170.62	0.036	+			28058	NAARDFVNY	9	66	535.2572124207992	1068.4998719083983	2	535.2564086914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NAARDFVNY_	DHX9|p.L1065Cfs*20|1|0.41|ENSG00000135829|chr1:182883563-182883563|C/-|frameshift_variant;DHX9|p.L657Ffs*44|1|0.34|ENSG00000135829|chr1:182876197-182876198|-/T|frameshift_variant;DHX9|p.Q155Lfs*8|1|0.08|ENSG00000135829|chr1:182853404-182853405|-/TG|frameshift_variant;ENSG00000135829|ENST00000367549|DHX9	60.1669710687717	0.2122228167747824	5				NaN	NaN	0	NaN	7439	4109	11546
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11562	33.053	NaN	4181.4	30	0	497.41	0.215	+			22427	KTLAGLVVQL	10	69	521.3370232318719	1040.6594935305436	2	521.337158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTLAGLVVQL_	ENSG00000173473|ENST00000254480|SMARCC1;SMARCC1|p.N815Kfs*2|1|0.32|ENSG00000173473|chr3:47636068-47636069|-/T|frameshift_variant	72.2432373244024	0.2589930451692646	5				NaN	NaN	0	NaN	7448	4112	11561
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11563	33.056	NaN	1319.7	30	0	184.58	0.106	+			47868	VSLGLAVSK	9	55	437.2739576255724	872.5333623179448	2	437.2737121582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSLGLAVSK_	ENSG00000018869|ENST00000586929|ZNF582;ENSG00000197302|ENST00000316491|KRBOX5;ENSG00000197566|ENST00000311331|ZNF624;ENST00000529943.6_1_16:31724760-31765604:+|nuORF;ENST00000534277.5_1_16:31724760-31767037:+|nuORF;ENST00000579983.1_1_17:16534952-16537956:-|nuORF;ZNF624|p.I325Nfs*9|1|0.21|ENSG00000197566|chr17:16623912-16623913|-/T|frameshift_variant;ZNF624|p.I325Sfs*167|1|0.46|ENSG00000197566|chr17:16623913-16623913|T/-|frameshift_variant;ZNF624|p.K498Nfs*74|1|0.49|ENSG00000197566|chr17:16623392-16623392|T/-|frameshift_variant;ZNF624|p.K666Nfs*130|1|0.46|ENSG00000197566|chr17:16622888-16622888|T/-|frameshift_variant;ZNF624|p.K787Ifs*14|1|0.11|ENSG00000197566|chr17:16622526-16622527|-/ATAAATGTAATGAA|frameshift_variant	88.17693792209575	0.07000514020414955	5				NaN	NaN	0	NaN	7449	4112	11561
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11564	33.058	NaN	1473.3	30	0	89.144	0.106	+			47970	VSPAKLFPM	9	60	495.27943167621794	988.5443104192359	2	495.2975769042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSPAKLFPM_	ENST00000496366.1_1_1:46153874-46159045:+|nuORF	35.61828744233558	0.47037581924408073	5				NaN	NaN	0	NaN	7450	4112	11561
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11565	33.06	NaN	1265.5	30	0	143.08	0.106	+			50536	YAQNAKVI	8	51	453.7554382001697	905.4963234671394	2	453.7554016113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YAQNAKVI_	ENSG00000018610|ENST00000644802|STEEP1;ENST00000469448.1_1_X:118673692-118676584:-|nuORF;nc|ENSG00000018610|Q9H5V9-2|STEEP1;nc|ENSG00000018610|Q9H5V9-3|STEEP1	42.47446043378293	0.6409579893742323	5				NaN	NaN	0	NaN	7451	4112	11561
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11566	33.062	NaN	1700.5	30	0	360.49	0.038				-1	MVQASTLILM	10	36	388.87182411919554	1163.5936429577866	3	389.2059631347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))MVQASTLILM(Oxidation (M))_	ENST00000394722.7_1_5:139825491-139825542:+|nuORF	22.579656572578934	0.6954366826851017	5				NaN	NaN	0	NaN	7452	4112	11561
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11573	33.08	NaN	4296.8	30	0	2312.6	0.214	+			26446	LTGQYYLQ	8	58	493.2531088633042	984.4916647934084	2	493.2532043457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LTGQYYLQ_	ENST00000443166.5_1_7:74119516-74120740:+|nuORF	47.91560031466742	0.6071945918984287	5				NaN	NaN	0	NaN	7456	4115	11572
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11574	33.084	NaN	3034.2	30	0	226.06	0.106	+			41462	SVNNSIFYR	9	69	550.2800420959645	1098.545531258729	2	550.2801513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVNNSIFYR_	DHX16|p.I1033*|5|0.32|ENSG00000204560|chr6:30653271-30653271|T/-|frameshift_variant;DHX16|p.R868Lfs*15|1|0.04|ENSG00000204560|chr6:30655493-30655493|C/-|frameshift_variant;ENSG00000204560|ENST00000376442|DHX16	70.8162118820467	0.13725933411854815	5				NaN	NaN	0	NaN	7457	4115	11572
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11575	33.085	NaN	1469.9	30	0	96.256	0.033	+			41333	SVLSLSGVM	9	55	446.7440542715291	891.4735556098582	2	446.743896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVLSLSGVM_	ENSG00000185686|ENST00000405655|PRAME	40.5726180659479	0.4135428067754104	5				NaN	NaN	0	NaN	7458	4115	11572
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11586	33.109	NaN	2363.2	30	0	248.55	0.214	+			36477	SEVSKIVTV	9	60	481.2817461293739	960.5489393255478	2	481.28228759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEVSKIVTV_	ENSG00000163535|ENST00000357799|SGO2;nc|ENSG00000163535|Q562F6-2|SGO2	96.0336014099291	0.047854655524928534	5				NaN	NaN	0	NaN	7466	4118	11585
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11587	33.113	NaN	1175.8	30	0	74.087	0.04			+	1425	AEWYKELDSNI	11	66	684.3275158184628	NaN	0	684.3289794921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEWYKELDSNI_	REV__nc|ENSG00000145014|Q2T9K0-7|TMEM44	53.59686742100583	0.28948468610734834	5				NaN	NaN	0	NaN	7467	4118	11585
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11597	33.135	NaN	3446	30	0	431.18	0.214	+			17375	IALVHTDSY	9	62	509.76377069985625	NaN	0	509.7639465332031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IALVHTDSY_	ENSG00000198961|ENST00000361189|PJA2;nc|ENSG00000198961|O43164-2|PJA2;PJA2|p.D450Rfs*6|1|0.16|ENSG00000198961|chr5:109368682-109368683|-/T|frameshift_variant	101.60071028292904	0.0182107634719595	5				NaN	NaN	0	NaN	7474	4121	11596
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11598	33.139	NaN	3830.1	30	0	489.31	0.106	+			36846	SIFGGAKPV	9	50	438.2529397971504	874.4913266611009	2	438.2527770996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SIFGGAKPV_	ENSG00000063046|ENST00000262056|EIF4B;ENST00000432132.2_1_9:98909238-98910135:+|nuORF;ENST00000432307.1_1_X:110862947-110863739:-|nuORF;nc|ENSG00000063046|P23588-2|EIF4B	66.42927471994793	0.16001998865088202	5				NaN	NaN	0	NaN	7475	4121	11596
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11599	33.14	NaN	1415.4	30	0	177.81	0.106			+	16004	HAPLLPDGQ	9	53	474.25076271424297	NaN	0	474.2509765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HAPLLPDGQ_	REV__CTNND2|p.P446L|1|0.1|ENSG00000169862|chr5:11364731-11364731|G/A|missense_variant	30.503639358989545	0.3235605894931338	5				NaN	NaN	0	NaN	7476	4121	11596
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11600	33.142	NaN	1290.6	30	0	206.53	0.034			+	18854	IVDPHLAGL	9	50	467.7716360688896	933.5287192045793	2	467.77069091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IVDPHLAGL_	REV__FARSB|p.V563A|1|0.34|ENSG00000116120|chr2:222571953-222571953|A/G|missense_variant	31.954861631926434	0.5046124803899898	5				NaN	NaN	0	NaN	7477	4121	11596
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11611	33.168	NaN	8553.3	30	0	1911.4	0.214	+			8504	EATGQFHVY	9	73	526.2456174497253	1050.4766819662505	2	526.2462768554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EATGQFHVY_	CEACAM6|p.I217Mfs*11|3|0.07|ENSG00000086548|chr19:41761474-41761475|-/G|frameshift_variant;chr19:41756959-41758061|166|203.57|0.0|24.28|+|2|CEACAM6,None|1;ENSG00000079385|ENST00000161559|CEACAM1;ENSG00000086548|ENST00000199764|CEACAM6;ENSG00000170956|ENST00000357396|CEACAM3;ENST00000344391.9_1_19:43023158-43032553:-|nuORF;ENST00000377806.7_1_19:43023094-43032607:-|nuORF;ENST00000403136.1_1_19:43025413-43032607:-|nuORF;nc|ENSG00000079385|P13688-10|CEACAM1;nc|ENSG00000079385|P13688-11|CEACAM1;nc|ENSG00000079385|P13688-2|CEACAM1;nc|ENSG00000079385|P13688-3|CEACAM1;nc|ENSG00000079385|P13688-4|CEACAM1;nc|ENSG00000079385|P13688-5|CEACAM1;nc|ENSG00000079385|P13688-6|CEACAM1;nc|ENSG00000079385|P13688-7|CEACAM1;nc|ENSG00000079385|P13688-8|CEACAM1;nc|ENSG00000079385|P13688-9|CEACAM1;nc|ENSG00000170956|P40198-2|CEACAM3;nc|ENSG00000170956|P40198-3|CEACAM3	133.8126618989323	0.013382794002272486	5				NaN	NaN	0	NaN	7485	4124	11610
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11612	33.171	NaN	8117.1	30	0	1808.8	0.106	+			30664	QAVILDQKY	9	68	539.3004135475775	1076.5862741619549	2	539.3011474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QAVILDQKY_	ENSG00000127831|ENST00000248444|VIL1	154.1183686248401	0.005909203230691971	5				NaN	NaN	0	NaN	7486	4124	11610
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11613	33.173	NaN	2321.2	30	0	119.87	0.106	+			48759	VTVRPGLAM	9	61	472.2734948255649	NaN	0	472.27325439453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTVRPGLAM_	ENSG00000099974|ENST00000215770|DDTL;ENSG00000099977|ENST00000398344|DDT;ENST00000444947.2_1_22:24315904-24316657:-|nuORF;nc|ENSG00000099977|P30046-2|DDT	52.936696900407355	0.1864545979552969	5				NaN	NaN	0	NaN	7487	4124	11610
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11614	33.175	NaN	1717	30	0	251.57	0.035			+	8054	DVEYKLKT	8	57	498.27366395555754	994.5327749779151	2	498.27410888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DVEYKLKT_	REV__ENSG00000101638|ENST00000315087|ST8SIA5;REV__ENST00000589088.1_1_18:44266135-44268875:-|nuORF;REV__nc|ENSG00000101638|O15466-2|ST8SIA5	53.351449002276354	0.5676011784961348	5				NaN	NaN	0	NaN	7488	4124	11610
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11627	33.202	NaN	3046.4	30	0	389.07	0.214			+	25143	LLSEAGSLVVG	11	57	522.8003065106074	1043.5860600880146	2	522.8001098632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LLSEAGSLVVG_	REV__ENSG00000197077|ENST00000358431|KIAA1671;REV__KIAA1671|p.S1569Afs*58|1|0.46|ENSG00000197077|chr22:25174289-25174289|C/-|frameshift_variant;REV__KIAA1671|p.T1322Rfs*192|1|0.18|ENSG00000197077|chr22:25041088-25041088|A/-|frameshift_variant	71.87747018426188	0.2200878389444539	5				NaN	NaN	0	NaN	7498	4127	11626
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11628	33.206	NaN	1648.3	30	0	243.21	0.106	+			38921	SSPSYENSL	9	53	492.21940381383064	NaN	0	492.21923828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSPSYENSL_	ENSG00000140262|ENST00000333725|TCF12;nc|ENSG00000140262|Q99081-2|TCF12;nc|ENSG00000140262|Q99081-4|TCF12;nc|ENSG00000140262|Q99081|TCF12;TCF12|p.D536Afs*2|1|0.04|ENSG00000140262|chr15:57263207-57263208|-/C|frameshift_variant;TCF12|p.V474Mfs*18|1|0.15|ENSG00000140262|chr15:57262114-57262123|CTCTGTCAGT/-|frameshift_variant	75.04331003522576	0.0883683072398826	5				NaN	NaN	0	NaN	7499	4127	11626
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11629	33.208	NaN	2518.7	30	0	563.5	0.106	+			42216	TAAGTLIAK	9	53	423.2581381086015	844.501723284003	2	423.2578430175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TAAGTLIAK_	ENSG00000180448|ENST00000313093|ARHGAP45;ENST00000587602.5_1_19:1073185-1086002:+|nuORF;nc|ENSG00000180448|Q92619-2|ARHGAP45	74.25504064058377	0.12238981753128622	5				NaN	NaN	0	NaN	7500	4127	11626
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11630	33.209	NaN	1531	30	0	231.94	0.106	+			43641	TIQYFSPTQ	9	56	542.7691132146568	1083.5236734961136	2	542.77001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TIQYFSPTQ_	ENST00000488118.6_1_10:111643840-111643882:-|nuORF	35.61828744233558	0.47037581924408073	5				NaN	NaN	0	NaN	7501	4127	11626
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11631	33.211	NaN	1014.2	30	0	125.27	0.106			+	43921	TPAGKPSPPT	10	53	476.75822899918705	NaN	0	476.75848388671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TPAGKPSPPT_	REV__ENSG00000196531|ENST00000454682|NACA	37.81151784470057	0.3760215235790741	5				NaN	NaN	0	NaN	7502	4127	11626
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11632	33.213	NaN	2742.4	30	0	239.48	0.035			+	48609	VTRWGEQI	8	60	494.76438446404944	NaN	0	494.7644958496094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTRWGEQI_	REV__ENSG00000249115|ENST00000203166|HAUS5;REV__ENST00000585968.5_1_19:36103696-36110661:+|nuORF;REV__ENST00000587439.5_1_19:36108795-36110661:+|nuORF	44.377184641726394	1.7418937515398478	5				NaN	NaN	0	NaN	7503	4127	11626
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11644	33.239	NaN	10951	30	0	2153.8	0.214	+			39499	STFNNDILSK	10	73	569.7905785715029	1137.5666042098057	2	569.7911376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STFNNDILSK_	ENSG00000111912|ENST00000392477|NCOA7;nc|ENSG00000111912|Q8NI08-2|NCOA7;nc|ENSG00000111912|Q8NI08-5|NCOA7;nc|ENSG00000111912|Q8NI08-7|NCOA7	136.5150327860613	0.011683253857074924	5				NaN	NaN	0	NaN	7512	4130	11643
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11645	33.242	NaN	5011.7	30	0	494.51	0.106	+			44273	TSALPIIQK	9	64	485.80032952447436	969.5861061157487	2	485.7995910644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TSALPIIQK_	ENSG00000147872|ENST00000276914|PLIN2;ENST00000472715.1_1_9:19126103-19127487:-|nuORF;ENST00000475923.1_1_9:19126103-19126313:-|nuORF;PLIN2|p.V348*|1|0.15|ENSG00000147872|chr9:19116520-19116520|C/-|frameshift_variant	93.19546047674547	0.05585629608842056	5				NaN	NaN	0	NaN	7513	4130	11643
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11646	33.244	NaN	4917.7	30	0	1330.2	0.106	+			39506	STFNQVVLK	9	65	518.2953809765813	1034.5762090199626	2	518.2962646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STFNQVVLK_	ENSG00000063177|ENST00000549920|RPL18;ENST00000478088.1_1_16:76269257-76269449:-|nuORF;ENST00000547892.1_1_19:49120227-49120731:-|nuORF;ENST00000552347.5_1_19:49120227-49122400:-|nuORF;ENST00000552705.5_1_19:49119841-49122400:-|nuORF;ENST00000552851.1_1_19:49119841-49122400:-|nuORF;nc|ENSG00000063177|Q07020-2|RPL18	36.446750945000026	0.4619375763483977	5				NaN	NaN	0	NaN	7514	4130	11643
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11647	33.246	NaN	1927.6	30	0	616.72	0.033	+			44957	TVAVPLVGK	9	43	442.2846183389036	882.5546837446072	2	442.2846374511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TVAVPLVGK_	ENSG00000136986|ENST00000259512|DERL1;nc|ENSG00000136986|Q9BUN8-2|DERL1	44.116797842482775	0.37197099687881774	5				NaN	NaN	0	NaN	7515	4130	11643
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11660	33.273	NaN	6798.7	30	0	1142.5	0.214	+			38500	SSATTSPFFK	10	75	536.7691020183242	1071.5236511034484	2	536.7696533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSATTSPFFK_	ENSG00000133961|ENST00000555238|NUMB;nc|ENSG00000133961|P49757-2|NUMB;nc|ENSG00000133961|P49757-3|NUMB;nc|ENSG00000133961|P49757-4|NUMB;nc|ENSG00000133961|P49757-5|NUMB;nc|ENSG00000133961|P49757-6|NUMB;nc|ENSG00000133961|P49757-7|NUMB;nc|ENSG00000133961|P49757-8|NUMB;nc|ENSG00000133961|P49757-9|NUMB	70.8162118820467	0.27065172005956	5				NaN	NaN	0	NaN	7525	4133	11659
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11661	33.277	NaN	2506	30	0	477.27	0.106	+			15325	GTVITSVIK	9	56	459.28672729081666	NaN	0	459.2867126464844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTVITSVIK_	ENSG00000120690|ENST00000239882|ELF1;nc|ENSG00000120690|P32519-2|ELF1	72.87924865735499	0.09578366712754152	5				NaN	NaN	0	NaN	7526	4133	11659
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11662	33.279	NaN	4762.9	30	0	1545.7	0.106				-1	CLVELCVAK	9	64	517.7717646525052	1033.5289763718104	2	517.7706909179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_CLVELC(Carbamidomethyl (C))VAK_	USP9X|p.R154C|1|0.3|ENSG00000124486|chrX:41136828-41136828|C/T|missense_variant	30.503639358989545	0.5181749237905803	5				NaN	NaN	0	NaN	7527	4133	11659
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11663	33.281	NaN	6791.9	30	0	2068.4	0.106	+			15311	GTVDVTPFIKK	11	42	402.23598451502056	NaN	0	402.2361145019531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTVDVTPFIKK_	ENSG00000198408|ENST00000361464|OGA;nc|ENSG00000198408|O60502-2|OGA;nc|ENSG00000198408|O60502-4|OGA	42.33807565288922	0.3703495330385095	5				NaN	NaN	0	NaN	7528	4133	11659
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11664	33.282	NaN	1991.6	30	0	313.61	0.106			+	28963	NSFAAKVY	8	46	450.234972808686	898.455392684172	2	450.2347412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NSFAAKVY_	REV__tr|U7SYT2|U7SYT2_FUSNURibosomalRNAsmallsubunitmethyltransferaseAOS=FusobacteriumnucleatumCTI-5OX=1316586GN=rsmAPE=3SV=1	27.882242232435846	0.7440473649773525	5				NaN	NaN	0	NaN	7529	4133	11659
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11665	33.284	NaN	1546.6	30	0	114.53	0.039			+	-1	NSKPTCNLLKR	11	60	665.8681969175949	NaN	0	665.8680419921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_NSKPTC(Carbamidomethyl (C))NLLKR_	REV__ENST00000474315.5_2_20:2640931-2641006:-|nuORF	27.047317107675042	0.44487757903053116	5				NaN	NaN	0	NaN	7530	4133	11659
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11666	33.285	NaN	1460.8	30	0	46.678	0.154				-1	 	0	69	670.0283122961775	NaN	0	669.6946411132812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7531	4133	11659
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11679	33.314	NaN	8607.4	30	0	892.92	0.214	+			10729	FADQEVRSL	9	73	532.7722489757871	1063.529945018374	2	532.7723388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FADQEVRSL_	ENSG00000011405|ENST00000691414|PIK3C2A	104.42354056486148	0.0346881550498418	5				NaN	NaN	0	NaN	7541	4136	11678
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11680	33.318	NaN	4152.4	30	0	1108.6	0.106			+	48514	VTNGLFGVV	9	60	453.2577466940007	904.5009404548014	2	453.2579040527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTNGLFGVV_	REV__ENSG00000135973|ENST00000258456|GPR45	55.50420428727701	0.2510918378945873	5				NaN	NaN	0	NaN	7542	4136	11678
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11681	33.32	NaN	2920.4	30	0	622.01	0.106	+			42189	TAADHFILL	9	57	500.774959601996	999.535366270792	2	500.7744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TAADHFILL_	L1PA6_dup546|chr2:49227587-49231532:-|4.547726375381561|0.2927699401366612|3.96|483.0|185|2|anti-sense	37.15910966729921	0.4535818937225704	5				NaN	NaN	0	NaN	7543	4136	11678
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11682	33.321	NaN	6206.5	30	0	2647.9	0.106	+			31871	QPWNHGETF	9	62	558.2486805652379	1114.4828081972757	2	558.2489624023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QPWNHGETF_	nc|ENSG00000211890|P01877-1|IGHA2;nc|ENSG00000211890|P01877|IGHA2	37.15910966729921	0.4535818937225704	5				NaN	NaN	0	NaN	7544	4136	11678
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11683	33.323	NaN	1826.4	30	0	390.61	0.106	+			7386	DDVTFGVLKR	10	61	575.316934263103	1148.619315593006	2	575.3175048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DDVTFGVLKR_	sp|F5HE12|UL35_HCMVMTegumentproteinUL35OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL35PE=3SV=1;sp|P16766|UL35_HCMVAProteinUL35OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL35PE=1SV=1	31.529811441608018	0.6223461015008678	5				NaN	NaN	0	NaN	7545	4136	11678
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11684	33.325	NaN	1183.4	30	0	97.192	0.035	+			45139	TVLENSTSY	9	52	507.24323283454675	NaN	0	507.24322509765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TVLENSTSY_	ASAH1|p.W314Cfs*28|1|0.11|ENSG00000104763|chr8:18059440-18059440|C/-|frameshift_variant;ENSG00000104763|ENST00000637790|ASAH1;nc|ENSG00000104763|Q13510-2|ASAH1;nc|ENSG00000104763|Q13510-3|ASAH1	55.08391021199286	0.17165699430885212	5				NaN	NaN	0	NaN	7546	4136	11678
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11692	33.343	NaN	1584.3	30	0	260.16	0.143	+			18651	ISTSVTSTPP	10	57	495.2610834799341	NaN	0	495.26263427734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ISTSVTSTPP_	ENST00000524624.5_1_8:144674891-144675038:-|nuORF	47.657333605630114	0.3204131577145918	5				NaN	NaN	0	NaN	7551	4139	11691
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11704	33.371	NaN	7737.3	30	0	815.34	0.214	+			42666	TAVTVNQSL	9	69	466.75602610699593	931.4974992807919	2	466.7557678222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAVTVNQSL_	CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000425226.1_1_2:203706028-203706388:-|nuORF;ENST00000550170.5_1_12:53294858-53298765:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	209.83999722684857	5.2930464786782614E-08	5				NaN	NaN	0	NaN	7560	4142	11703
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11705	33.374	NaN	4100.2	30	0	992.64	0.106	+			41982	SVYDSVLQK	9	60	519.7765170464081	1037.5384811596161	2	519.77734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVYDSVLQK_	ENSG00000131018|ENST00000367255|SYNE1;ENST00000490135.6_1_6:152637953-152655276:-|nuORF;nc|ENSG00000131018|Q8NF91-4|SYNE1;nc|ENSG00000131018|Q8NF91-7|SYNE1;SYNE1|p.E4738Kfs*25|1|0.12|ENSG00000131018|chr6:152330474-152330474|T/-|frameshift_variant;SYNE1|p.E5862Gfs*83|1|0.12|ENSG00000131018|chr6:152300729-152300738|CCAGACTCCT/-|frameshift_variant;SYNE1|p.G6773Wfs*7|1|0.44|ENSG00000131018|chr6:152236186-152236187|-/A|frameshift_variant;SYNE1|p.K6871Rfs*22|2|0.52|ENSG00000131018|chr6:152233881-152233881|T/-|frameshift_variant;SYNE1|p.L8283Pfs*8|1|0.19|ENSG00000131018|chr6:152148173-152148174|-/G|frameshift_variant;SYNE1|p.M5602Nfs*13|2|0.32|ENSG00000131018|chr6:152310779-152310780|-/T|frameshift_variant;SYNE1|p.V8635Sfs*12|1|0.15|ENSG00000131018|chr6:152133375-152133375|T/-|frameshift_variant	104.0567914643314	0.03506238181059741	5				NaN	NaN	0	NaN	7561	4142	11703
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11706	33.376	NaN	1042.6	30	0	115.02	0.106	+			26378	LTDLNLTK	8	56	459.2674270750182	NaN	0	459.2682189941406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LTDLNLTK_	ENSG00000166897|ENST00000402918|ELFN2	37.15910966729921	1.7418937515398478	5				NaN	NaN	0	NaN	7562	4142	11703
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11707	33.378	NaN	652.8	30	0	79.731	0.038			+	33841	RRDIFHADW	9	37	608.3032836914062	NaN	0	608.3032836914062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RRDIFHADW_	REV__ENSG00000260903|ENST00000562532|XKR7	20.94693142431847	0.3660861156085067	5				NaN	NaN	0	NaN	7563	4142	11703
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11717	33.4	NaN	10456	30	0	1249.6	0.214	+			5804	AVIDVGINR	9	68	478.7795648567357	955.5445767802714	2	478.7794189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVIDVGINR_	ENSG00000065911|ENST00000394053|MTHFD2;nc|ENSG00000065911|P13995-2|MTHFD2	107.00750918261382	0.032051501805654005	5				NaN	NaN	0	NaN	7570	4145	11716
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11718	33.403	NaN	15826	30	0	1777.8	0.106	+			8123	DYMKTTSNF	9	81	553.7443637106355	1105.474174488071	2	553.7452392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DYMKTTSNF_	ENSG00000165525|ENST00000298310|NEMF;nc|ENSG00000165525|O60524-3|NEMF;nc|ENSG00000165525|O60524-4|NEMF;NEMF|p.K641Rfs*9|1|0.15|ENSG00000165525|chr14:49802721-49802721|T/-|frameshift_variant;NEMF|p.M879*|1|0.12|ENSG00000165525|chr14:49789558-49789558|T/-|frameshift_variant;NEMF|p.M879Nfs*10|1|0.13|ENSG00000165525|chr14:49789557-49789558|-/T|frameshift_variant	140.11223852658463	0.010427410095706195	5				NaN	NaN	0	NaN	7571	4145	11716
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11719	33.405	NaN	5418.3	30	0	1857.7	0.106	+			30317	PTPVSLFRET	10	73	573.8111467994045	1145.6077406656088	2	573.811279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PTPVSLFRET_	ENSG00000183034|ENST00000331427|OTOP2;OTOP2|p.F290Lfs*25|2|0.27|ENSG00000183034|chr17:74930500-74930500|T/-|frameshift_variant	51.19269402634007	0.44601001148513897	5				NaN	NaN	0	NaN	7572	4145	11716
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11720	33.407	NaN	4054.7	30	0	555.07	0.106			+	17559	IDYVLLVGQ	9	74	510.2921948286302	1018.5698367240605	2	510.2920227050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IDYVLLVGQ_	REV__ENSG00000157869|ENST00000330852|RAB28;REV__nc|ENSG00000157869|P51157-2|RAB28;REV__nc|ENSG00000157869|P51157-3|RAB28;REV__RAB28|p.L145Gfs*37|2|0.22|ENSG00000157869|chr4:13381550-13381553|GTAA/-|frameshift_variant	37.15910966729921	0.4535818937225704	5				NaN	NaN	0	NaN	7573	4145	11716
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11721	33.409	NaN	1621.3	30	0	187.19	0.034			+	-1	SVLFTCLA	8	47	455.7380949936189	909.4616370540379	2	455.73809814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_SVLFTC(Carbamidomethyl (C))LA_	REV__ENSG00000185917|ENST00000332131|SETD4;REV__nc|ENSG00000185917|Q9NVD3-3|SETD4;REV__nc|ENSG00000185917|Q9NVD3-4|SETD4	42.47446043378293	0.6409579893742323	5				NaN	NaN	0	NaN	7574	4145	11716
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11734	33.436	NaN	1718.1	30	0	148.89	0.214	+			50494	YALQVHCY	8	59	527.2443288619767	1052.4741047907532	2	527.245361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_YALQVHC(Carbamidomethyl (C))Y_	ENSG00000110321|ENST00000339995|EIF4G2;ENST00000525606.5_1_11:10819365-10820979:-|nuORF;ENST00000534470.1_1_11:10820460-10820850:-|nuORF;nc|ENSG00000110321|P78344-2|EIF4G2	74.51659920185547	0.36926395944126233	5				NaN	NaN	0	NaN	7584	4148	11733
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11735	33.44	NaN	2073.6	30	0	224.34	0.106			+	25889	LSGDAEVKP	9	52	458.2426083942495	NaN	0	458.2429504394531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSGDAEVKP_	REV__AHNAK2|p.D4448Gfs*6|1|0.2|ENSG00000185567|chr14:104942108-104942109|-/C|frameshift_variant;REV__AHNAK2|p.E5149Gfs*8|1|0.32|ENSG00000185567|chr14:104940005-104940006|-/C|frameshift_variant;REV__AHNAK2|p.E5446Gfs*7|1|0.32|ENSG00000185567|chr14:104939114-104939115|-/C|frameshift_variant;REV__AHNAK2|p.L4206Cfs*19|1|0.12|ENSG00000185567|chr14:104942835-104942835|G/-|frameshift_variant;REV__AHNAK2|p.P2536Lfs*14|1|0.11|ENSG00000185567|chr14:104947844-104947844|G/-|frameshift_variant;REV__ENSG00000185567|ENST00000333244|AHNAK2;REV__nc|ENSG00000185567|Q8IVF2-3|AHNAK2	69.6276240434122	0.10825701912424071	5				NaN	NaN	0	NaN	7585	4148	11733
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11736	33.442	NaN	2197.9	30	0	273.91	0.106				-1	DASPEAVGTI	10	57	501.24317158404176	1000.4717902348835	2	501.24407958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))DASPEAVGTI_	ENSG00000138411|ENST00000644978|HECW2;HECW2|p.G1392Vfs*19|1|0.22|ENSG00000138411|chr2:196220913-196220913|C/-|frameshift_variant;HECW2|p.L339I|1|0.25|ENSG00000138411|chr2:196319875-196319875|G/T|missense_variant;HECW2|p.R1017Gfs*19|1|0.33|ENSG00000138411|chr2:196278614-196278614|G/-|frameshift_variant;HECW2|p.V922*|1|0.28|ENSG00000138411|chr2:196306539-196306539|G/-|frameshift_variant	26.69291269510374	0.6618461711292317	5				NaN	NaN	0	NaN	7586	4148	11733
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11737	33.444	NaN	3627.8	30	0	1343.9	0.106	+			35438	SASDLRWLK	9	48	359.20139309982596	1074.5823498996779	3	359.2013854980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SASDLRWLK_	ENST00000312037.5_1_5:149826506-149829126:-|nuORF;ENST00000407193.5_1_5:149826506-149829126:-|nuORF	56.72105179125745	0.24094814563026265	5				NaN	NaN	0	NaN	7587	4148	11733
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11738	33.445	NaN	2165.1	30	0	193.95	0.035	+			5572	AVAQVLLQH	9	59	489.7897837103839	977.5650144875679	2	489.7906799316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVAQVLLQH_	ENSG00000205978|ENST00000382554|NYNRIN	65.46538089061403	0.16805504838372562	5				NaN	NaN	0	NaN	7588	4148	11733
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11751	33.473	NaN	9230.7	30	0	2529.3	0.214	+			40352	STTQVVGILK	10	71	523.3159588655084	1044.6173647978167	2	523.31640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STTQVVGILK_	ENSG00000198898|ENST00000361183|CAPZA2;ENST00000426421.5_1_7:116544367-116557918:+|nuORF	114.85826248499774	0.03459167991829056	5				NaN	NaN	0	NaN	7598	4151	11750
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11752	33.476	NaN	3523.6	30	0	992.03	0.106	+			12187	GANTIFLTK	9	58	482.77685718700116	963.5391614408023	2	482.77679443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GANTIFLTK_	CNNM2|p.L511*|2|0.33|ENSG00000148842|chr10:102920006-102920006|C/-|frameshift_variant;CNNM2|p.P452Hfs*7|1|0.48|ENSG00000148842|chr10:102919832-102919832|C/-|frameshift_variant;CNNM2|p.T824Pfs*14|1|0.29|ENSG00000148842|chr10:103077019-103077019|A/-|frameshift_variant;ENSG00000148842|ENST00000369878|CNNM2;nc|ENSG00000148842|Q9H8M5-2|CNNM2;nc|ENSG00000148842|Q9H8M5-3|CNNM2	46.45678178249821	0.34452392205506005	5				NaN	NaN	0	NaN	7599	4151	11750
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11753	33.478	NaN	1223.9	30	0	224.69	0.106				-1	SLTMKVAVNK	10	36	369.54510498046875	NaN	0	369.54510498046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_SLTM(Oxidation (M))KVAVNK_	ENST00000418474.1_1_2:160472985-160473165:+|nuORF	33.921630207806714	0.38879399011744475	5				NaN	NaN	0	NaN	7600	4151	11750
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11754	33.48	NaN	2929.7	30	0	401.64	0.106	+			37524	SLLPIAPDLE	10	68	534.3038350620352	1066.5931171908703	2	534.3041381835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLLPIAPDLE_	ENSG00000186566|ENST00000591680|GPATCH8;nc|ENSG00000186566|Q9UKJ3-2|GPATCH8	32.81241826257853	0.6118718159329168	5				NaN	NaN	0	NaN	7601	4151	11750
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11755	33.482	NaN	1086.4	30	0	125.99	0.106			+	23916	LDLMSVSK	8	50	446.7451276291755	NaN	0	446.7442321777344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LDLMSVSK_	REV__ENSG00000197283|ENST00000646630|SYNGAP1;REV__nc|ENSG00000197283|Q96PV0-2|SYNGAP1;REV__nc|ENSG00000197283|Q96PV0-3|SYNGAP1;REV__nc|ENSG00000197283|Q96PV0-4|SYNGAP1;REV__SYNGAP1|p.F979Ifs*5|1|0.67|ENSG00000197283|chr6:33443481-33443482|-/C|frameshift_variant;REV__SYNGAP1|p.L1302Wfs*8|1|0.21|ENSG00000197283|chr6:33451772-33451772|C/-|frameshift_variant	35.61828744233558	1.7418937515398478	5				NaN	NaN	0	NaN	7602	4151	11750
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11756	33.484	NaN	1497.2	30	0	105.27	0.04	+			27092	MAMMVFPREEK	11	69	684.8295784169767	NaN	0	684.829345703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MAMMVFPREEK_	ENSG00000174996|ENST00000394067|KLC2;nc|ENSG00000174996|Q9H0B6-2|KLC2	36.446750945000026	0.40298828388271424	5				NaN	NaN	0	NaN	7603	4151	11750
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11757	33.484	NaN	3289.6	30	0	260.46	0.144	+			49971	WAEEGQRVL	9	70	544.2796974160719	1086.5448418989438	2	544.2802124023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_WAEEGQRVL_	ENSG00000196155|ENST00000379344|PLEKHG4;ENST00000563969.5_1_16:67314567-67322708:+|nuORF;nc|ENSG00000196155|Q58EX7-2|PLEKHG4;PLEKHG4|p.L616Wfs*32|1|0.43|ENSG00000196155|chr16:67284862-67284862|G/-|frameshift_variant	68.62578634547417	0.14673074753754126	5				NaN	NaN	0	NaN	7604	4151	11750
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11771	33.515	NaN	3573.5	30	0	465.82	0.214	+			17021	HPTVVISAY	9	56	493.7687564695629	985.5229600059258	2	493.7687683105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HPTVVISAY_	CCT3|p.A379Lfs*9|1|0.21|ENSG00000163468|chr1:156312061-156312061|C/-|frameshift_variant;CCT3|p.K197Nfs*23|1|0.17|ENSG00000163468|chr1:156320857-156320857|T/-|frameshift_variant;CCT3|p.L350Ffs*9|1|0.49|ENSG00000163468|chr1:156312146-156312147|-/A|frameshift_variant;ENSG00000163468|ENST00000295688|CCT3;nc|ENSG00000163468|P49368-2|CCT3	53.351449002276354	0.2690372970092375	5				NaN	NaN	0	NaN	7615	4154	11770
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11772	33.519	NaN	6594.5	30	0	782.84	0.106	+			44317	TSFDGSLIQK	10	68	548.287644096224	1094.5607352592478	2	548.2880249023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TSFDGSLIQK_	ENSG00000177485|ENST00000557385|ZBTB33	152.06079943815163	0.008129625933261015	5				NaN	NaN	0	NaN	7616	4154	11770
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11773	33.521	NaN	2095.9	30	0	394.87	0.106	+			26404	LTEIKGSVY	9	61	505.2818223431167	1008.5490917530334	2	505.2818908691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LTEIKGSVY_	ENSG00000153975|ENST00000368576|ZUP1;ENST00000471919.1_1_6:116981518-116989864:-|nuORF;ZUFSP|p.N219Kfs*9|1|0.45|ENSG00000153975|chr6:116660749-116660750|-/T|frameshift_variant	49.44154591367651	0.3095138337212152	5				NaN	NaN	0	NaN	7617	4154	11770
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11774	33.523	NaN	1569.3	30	0	189.87	0.106				-1	RALDRDCP	8	51	501.74496694346715	1001.4753809537343	2	501.7450256347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_RALDRDC(Carbamidomethyl (C))P_	ENST00000332783.11_1_15:101142945-101143215:+|nuORF	37.15910966729921	0.6739408393984688	5				NaN	NaN	0	NaN	7618	4154	11770
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11775	33.525	NaN	1255.9	30	0	121.77	0.106	+			507	ACILNMLK	8	53	489.7578386154284	977.5011242976568	2	489.7587585449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C),Oxidation (M)	_AC(Carbamidomethyl (C))ILNM(Oxidation (M))LK_	ENSG00000164308|ENST00000437043|ERAP2;ENST00000515095.5_1_5:96228145-96238354:+|nuORF;ENST00000515387.1_1_5:96232124-96244694:+|nuORF;nc|ENSG00000164308|Q6P179-2|ERAP2;nc|ENSG00000164308|Q6P179-3|ERAP2	65.89745868150666	0.44339748671293633	5				NaN	NaN	0	NaN	7619	4154	11770
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11776	33.526	NaN	590.17	30	0	79.289	0.039				-1	VCWLPFFLTH	10	39	660.33524600968	NaN	0	660.3349609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_VC(Carbamidomethyl (C))WLPFFLTH_	ENSG00000151577|ENST00000383673|DRD3;nc|ENSG00000151577|P35462-3|DRD3	16.473147378115264	0.4201028297492154	5				NaN	NaN	0	NaN	7620	4154	11770
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11790	33.556	NaN	249740	30	0	37528	0.196	+			29175	NVIRDAVTY	9	101	525.782079048411	1049.549605163622	2	525.782958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NVIRDAVTY_	ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2	109.47833844074708	0.029530294723441826	5				NaN	NaN	0	NaN	7631	4157	11789
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11791	33.559	NaN	11621	30	0	4359.1	0.106	+			5214	ATTSVITIVK	10	65	516.8183725172789	1031.6221921013578	2	516.8187866210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATTSVITIVK_	ENSG00000198517|ENST00000343242|MAFK	86.88156770896713	0.14892753630261096	5				NaN	NaN	0	NaN	7632	4157	11789
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11792	33.561	NaN	8032.1	30	0	963.08	0.106	+			46559	VFIDKQTNL	9	69	539.3006584677163	1076.5867640022325	2	539.301513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VFIDKQTNL_	ENSG00000048740|ENST00000633077|CELF2;ENSG00000149187|ENST00000687097|CELF1;nc|ENSG00000048740|O95319-2|CELF2;nc|ENSG00000048740|O95319-3|CELF2;nc|ENSG00000048740|O95319-4|CELF2;nc|ENSG00000048740|O95319-5|CELF2;nc|ENSG00000048740|O95319|CELF2;nc|ENSG00000149187|Q92879-2|CELF1;nc|ENSG00000149187|Q92879-3|CELF1;nc|ENSG00000149187|Q92879-4|CELF1;nc|ENSG00000149187|Q92879-5|CELF1;nc|ENSG00000149187|Q92879-6|CELF1;nc|ENSG00000149187|Q92879|CELF1	99.01295224348159	0.040209060045561164	5				NaN	NaN	0	NaN	7633	4157	11789
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11793	33.563	NaN	1612.3	30	0	300.37	0.106			+	8885	EESTVPRKL	9	59	529.795639456743	1057.5767259802858	2	529.796142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EESTVPRKL_	REV__ENSG00000155792|ENST00000286234|DEPTOR;REV__nc|ENSG00000155792|Q8TB45-2|DEPTOR	45.9519527083369	0.35044536499095585	5				NaN	NaN	0	NaN	7634	4157	11789
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11794	33.565	NaN	3059.9	30	0	380.22	0.034	+			45745	VADTVARVL	9	58	472.2812857363306	942.5480185394612	2	472.2784118652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VADTVARVL_	ENSG00000145632|ENST00000274289|PLK2	75.04331003522576	0.118981335847003	5				NaN	NaN	0	NaN	7635	4157	11789
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11806	33.59	NaN	3339.7	30	0	373.29	0.214	+			42560	TASESSYQL	9	60	493.227247036467	984.4399411397341	2	493.22760009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TASESSYQL_	ENSG00000137501|ENST00000359152|SYTL2;nc|ENSG00000137501|Q9HCH5-12|SYTL2;nc|ENSG00000137501|Q9HCH5-13|SYTL2;nc|ENSG00000137501|Q9HCH5-14|SYTL2;nc|ENSG00000137501|Q9HCH5-2|SYTL2;nc|ENSG00000137501|Q9HCH5-7|SYTL2;nc|ENSG00000137501|Q9HCH5-8|SYTL2;nc|ENSG00000137501|Q9HCH5-9|SYTL2;nc|ENSG00000137501|Q9HCH5|SYTL2;SYTL2|p.Q663Tfs*35|1|0.14|ENSG00000137501|chr11:85709344-85709345|-/T|frameshift_variant	71.87747018426188	0.13267044672804276	5				NaN	NaN	0	NaN	7644	4160	11805
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11807	33.594	NaN	3109.1	30	0	773.29	0.106	+			47294	VNGQKGIPG	9	60	435.24560129130566	868.4766496494113	2	435.2455139160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VNGQKGIPG_	COL4A4|p.G1230Vfs*58|2|0.28|ENSG00000081052|chr2:227032170-227032170|C/-|frameshift_variant;ENSG00000081052|ENST00000396625|COL4A4	38.80614096846853	0.43426287593479557	5				NaN	NaN	0	NaN	7645	4160	11805
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11808	33.596	NaN	2984.1	30	0	799.46	0.106			+	26969	LYKVQSTV	8	65	469.2714014079991	NaN	0	469.27154541015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LYKVQSTV_	REV__ENSG00000147606|ENST00000276609|SLC26A7;REV__nc|ENSG00000147606|Q8TE54-2|SLC26A7;REV__SLC26A7|p.K333Nfs*20|5|0.37|ENSG00000147606|chr8:91340519-91340519|A/-|frameshift_variant	42.396135135203025	1.7418937515398478	5				NaN	NaN	0	NaN	7646	4160	11805
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11809	33.598	NaN	1550.5	30	0	185.6	0.106	+			9447	EKLLHEKL	8	58	505.30514642732066	1008.5957399214413	2	505.3050537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EKLLHEKL_	ENSG00000147130|ENST00000314425|ZMYM3;ENST00000489332.1_1_X:70467340-70473105:-|nuORF;nc|ENSG00000147130|Q14202-2|ZMYM3	38.80614096846853	0.6637206697844082	5				NaN	NaN	0	NaN	7647	4160	11805
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11810	33.599	NaN	2251	30	0	231.93	0.106	+			48142	VSVVISELN	9	59	480.2738558506159	958.5331587680319	2	480.2743225097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSVVISELN_	ENST00000532004.5_1_11:810000-812833:+|nuORF	54.776311868738084	0.25715957988447635	5				NaN	NaN	0	NaN	7648	4160	11805
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11811	33.601	NaN	1815.9	30	0	180.16	0.034	+			24330	LFIQPAGIL	9	58	486.30120849609375	NaN	0	486.30120849609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LFIQPAGIL_	ENSG00000129003|ENST00000644861|VPS13C;nc|ENSG00000129003|Q709C8-2|VPS13C;nc|ENSG00000129003|Q709C8-3|VPS13C;nc|ENSG00000129003|Q709C8-4|VPS13C;VPS13C|p.N3163Sfs*6|1|0.05|ENSG00000129003|chr15:61882732-61882733|-/TTATCATCAC|frameshift_variant;VPS13C|p.P3597Lfs*3|1|0.26|ENSG00000129003|chr15:61868732-61868732|G/-|frameshift_variant	56.72105179125745	0.16330365735109603	5				NaN	NaN	0	NaN	7649	4160	11805
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11812	33.602	NaN	1372.9	30	0	70.229	0.14	+			9989	ERKRPKNI	8	61	520.821044921875	NaN	0	520.821044921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ERKRPKNI_	IGSF3|p.S394R|1|0.18|ENSG00000143061|chr1:116607982-116607982|G/T|missense_variant	45.9519527083369	1.7418937515398478	5				NaN	NaN	0	NaN	7650	4160	11805
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11821	33.624	NaN	4449.7	30	0	421.89	0.214	+			34075	RSPPKYRP	8	71	500.786606332795	999.55865973239	2	500.78741455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RSPPKYRP_	ENSG00000120832|ENST00000240050|MTERF2;MTERF2|p.N163Mfs*8|1|0.38|ENSG00000120832|chr12:106978227-106978227|T/-|frameshift_variant	53.351449002276354	0.5676011784961348	5				NaN	NaN	0	NaN	7656	4163	11820
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11822	33.628	NaN	1639.6	30	0	314.57	0.106			+	24489	LGGYSLQIS	9	55	469.2534212603395	936.492289587479	2	469.2527770996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LGGYSLQIS_	REV__PPARGC1B|p.F972I|1|0.11|ENSG00000155846|chr5:149845857-149845857|T/A|missense_variant	45.97224482568171	0.3502073465782774	5				NaN	NaN	0	NaN	7657	4163	11820
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11823	33.63	NaN	1048.2	30	0	474.01	0.106				-1	 	0	40	362.74059132507745	723.4666297169549	2	362.7403869628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7658	4163	11820
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11824	33.632	NaN	1520.6	30	0	362.51	0.05	+			21327	KLTSLNKYIEE	11	57	669.3687967863656	NaN	0	669.366943359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KLTSLNKYIEE_	ENSG00000173230|ENST00000614479|GOLGB1;ENST00000472829.1_1_3:121448028-121448843:-|nuORF;GOLGB1|p.D2495Tfs*21|1|0.22|ENSG00000173230|chr3:121691867-121691867|T/-|frameshift_variant;GOLGB1|p.E1174Gfs*19|1|0.24|ENSG00000173230|chr3:121696989-121696990|-/T|frameshift_variant;GOLGB1|p.E1375Sfs*20|1|0.04|ENSG00000173230|chr3:121696385-121696386|-/TGGA|frameshift_variant;GOLGB1|p.E1375Vfs*20|1|0.02|ENSG00000173230|chr3:121696386-121696387|-/AACTTAGTGAGAAAGAAGCAGCTCTCACT|frameshift_variant;GOLGB1|p.H151Rfs*5|1|0.02|ENSG00000173230|chr3:121726981-121726993|CCTGGAGCTTATG/-|frameshift_variant;GOLGB1|p.K2450Rfs*27|1|0.37|ENSG00000173230|chr3:121692000-121692000|T/-|frameshift_variant;GOLGB1|p.N731Mfs*23|1|0.39|ENSG00000173230|chr3:121698316-121698316|T/-|frameshift_variant;GOLGB1|p.Q2186Sfs*19|1|0.31|ENSG00000173230|chr3:121693952-121693952|G/-|frameshift_variant;GOLGB1|p.S1501Vfs*38|1|0.2|ENSG00000173230|chr3:121696007-121696007|T/-|frameshift_variant;nc|ENSG00000173230|Q14789-2|GOLGB1;nc|ENSG00000173230|Q14789-3|GOLGB1;nc|ENSG00000173230|Q14789-4|GOLGB1;nc|ENSG00000173230|Q14789|GOLGB1	25.125986553469783	0.45344013546260314	5				NaN	NaN	0	NaN	7659	4163	11820
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11838	33.662	NaN	5444.2	30	0	825.27	0.214	+			4817	ATNTVYVFAK	10	65	557.3002909967383	1112.5860290602766	2	557.3016357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATNTVYVFAK_	ENSG00000047315|ENST00000314595|POLR2B;POLR2B|p.A362Pfs*21|1|0.34|ENSG00000047315|chr4:57005423-57005423|A/-|frameshift_variant;POLR2B|p.K211Rfs*66|1|0.1|ENSG00000047315|chr4:56995302-56995302|A/-|frameshift_variant;POLR2B|p.N1030Sfs*23|1|0.07|ENSG00000047315|chr4:57025384-57025385|-/CT|frameshift_variant;POLR2B|p.P303Tfs*5|1|0.16|ENSG00000047315|chr4:57005248-57005249|-/A|frameshift_variant	136.98908636845044	0.01155686115611441	5				NaN	NaN	0	NaN	7670	4166	11837
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11839	33.665	NaN	3349.5	30	0	498.96	0.106			+	31508	QLEVKNAY	8	64	482.7583598577038	963.5021667822076	2	482.7583923339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QLEVKNAY_	REV__CON__Q3SY84;REV__CON__Q9R0H5;REV__ENSG00000139648|ENST00000267119|KRT71	73.97473282117947	0.3737790450121076	5				NaN	NaN	0	NaN	7671	4166	11837
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11840	33.667	NaN	2392.9	30	0	888.74	0.106			+	7674	DLEIKKKPH	9	46	369.8900496002062	1106.6483194008188	3	369.8904724121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DLEIKKKPH_	REV__ENSG00000188897|ENST00000696174|unknown;REV__ENST00000595170.1_3_16:11556095-11569480:-|nuORF	25.57405402267927	0.5642445186134241	5				NaN	NaN	0	NaN	7672	4166	11837
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11841	33.669	NaN	1000.6	30	0	59.193	0.106			+	17355	IALAVVGGAL	10	49	442.2846183389036	882.5546837446072	2	442.2898864746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IALAVVGGAL_	REV__ENSG00000249581|ENST00000511148|CLRN2	54.76467175910256	0.41345489472286195	5				NaN	NaN	0	NaN	7673	4166	11837
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11842	33.671	NaN	1902.7	30	0	283.75	0.106	+			4828	ATPAEVRYI	9	57	510.2796236055345	NaN	0	510.2801818847656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATPAEVRYI_	ENSG00000107338|ENST00000377707|SHB;nc|ENSG00000107338|Q15464-2|SHB	56.43379154798735	0.16452882468284893	5				NaN	NaN	0	NaN	7674	4166	11837
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11843	33.672	NaN	2048.5	30	0	146.59	0.036				-1	YDGGSKIMGY	10	68	553.7443637106355	1105.474174488071	2	553.7954711914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_YDGGSKIM(Oxidation (M))GY_	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42|TTN;TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;TTN|p.D20259Rfs*40|1|0.44|ENSG00000155657|chr2:178583105-178583106|-/T|frameshift_variant;TTN|p.D21555Ifs*6|1|0.33|ENSG00000155657|chr2:178576659-178576659|G/-|frameshift_variant;TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;TTN|p.E20392Dfs*6|1|0.04|ENSG00000155657|chr2:178582357-178582358|-/TTTAAAATTA|frameshift_variant;TTN|p.E20392Kfs*4|1|0.02|ENSG00000155657|chr2:178582359-178582360|-/TTTT|frameshift_variant;TTN|p.F18705Lfs*8|1|0.37|ENSG00000155657|chr2:178590687-178590687|A/-|frameshift_variant;TTN|p.G19920Afs*12|1|0.42|ENSG00000155657|chr2:178584961-178584961|G/-|frameshift_variant;TTN|p.G22029Efs*22|2|0.13|ENSG00000155657|chr2:178575125-178575125|T/-|frameshift_variant;TTN|p.I24998Nfs*2|1|0.35|ENSG00000155657|chr2:178566216-178566217|-/T|frameshift_variant;TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;TTN|p.K26626Nfs*34|1|0.34|ENSG00000155657|chr2:178561331-178561331|T/-|frameshift_variant;TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant;TTN|p.P16126Rfs*3|1|0.25|ENSG00000155657|chr2:178607301-178607302|TG/-|frameshift_variant;TTN|p.P22810Hfs*10|1|0.03|ENSG00000155657|chr2:178572780-178572781|-/AAAT|frameshift_variant;TTN|p.V22573Cfs*4|2|0.31|ENSG00000155657|chr2:178573492-178573492|C/-|frameshift_variant;TTN|p.V27442Cfs*4|1|0.05|ENSG00000155657|chr2:178558107-178558108|-/A|frameshift_variant	37.81151784470057	0.569310847604193	5				NaN	NaN	0	NaN	7675	4166	11837
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11844	33.673	NaN	1022.6	30	0	92.405	0.14	+			37632	SLQGGLPLL	9	48	449.27390551991573	NaN	0	449.2747802734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SLQGGLPLL_	ENSG00000262152|ENST00000573315|GREP1	52.936696900407355	0.1864545979552969	5				NaN	NaN	0	NaN	7676	4166	11837
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11855	33.698	NaN	12327	30	0	3380.8	0.214	+			4645	ATLPPITVTSK	11	66	564.337004507664	1126.659456082128	2	564.3372802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATLPPITVTSK_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	55.08391021199286	0.3673379875553588	5				NaN	NaN	0	NaN	7684	4169	11854
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11856	33.702	NaN	3745.7	30	0	670.77	0.106			+	37856	SNPAFEWHQ	9	71	558.2486805652379	1114.4828081972757	2	558.2489624023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SNPAFEWHQ_	REV__ENSG00000130227|ENST00000252512|XPO7;REV__ENSG00000204764|ENST00000523189|RANBP17;REV__nc|ENSG00000204764|Q9H2T7-2|RANBP17;REV__RANBP17|p.N641Tfs*35|2|0.1|ENSG00000204764|chr5:171183218-171183218|A/-|frameshift_variant	31.529811441608018	0.5085848003137583	5				NaN	NaN	0	NaN	7685	4169	11854
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11857	33.704	NaN	2978.4	30	0	1052.2	0.106	+			45437	TVYEEMMAK	9	63	551.2507998282332	1100.4870467232663	2	551.2522583007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVYEEMMAK_	ENSG00000144659|ENST00000650617|SLC25A38;SLC25A38|p.G301V|1|0.09|ENSG00000144659|chr3:39396507-39396507|G/T|missense_variant	71.87747018426188	0.13267044672804276	5				NaN	NaN	0	NaN	7686	4169	11854
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11858	33.706	NaN	1443.1	30	0	148.84	0.035				-1	MCVVHSTVH	9	58	514.7378331477012	NaN	0	514.737548828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_M(Oxidation (M))CVVHSTVH_	ENST00000344795.7_1_20:35240861-35240933:+|nuORF	40.5726180659479	0.27166212580479165	5				NaN	NaN	0	NaN	7687	4169	11854
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11869	33.729	NaN	4827.3	30	0	854.4	0.214	+			20821	KIFSGVFVK	9	67	512.8129135350542	1023.6112741369085	2	512.8131103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KIFSGVFVK_	ENSG00000146223|ENST00000493763|RPL7L1;ENST00000397415.7_1_6:42848808-42854199:+|nuORF;ENST00000462348.1_1_6:42848614-42854030:+|nuORF;ENST00000530523.1_1_8:42580956-42581139:-|nuORF;nc|ENSG00000146223|Q6DKI1-2|RPL7L1;RPL7L1|p.Q126Pfs*38|1|0.24|ENSG00000146223|chr6:42884698-42884699|-/C|frameshift_variant	109.43880257439609	0.029570636687953285	5				NaN	NaN	0	NaN	7695	4172	11868
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11870	33.733	NaN	3745.1	30	0	339.24	0.106	+			24258	LEVEKIGVGE	10	75	536.7975338775763	1071.5805148219524	2	536.7985229492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LEVEKIGVGE_	ENSG00000214102|ENST00000397541|WEE2;WEE2|p.K506*|1|0.1|ENSG00000214102|chr7:141727426-141727427|-/TG|frameshift_variant	99.01295224348159	0.08062808246117298	5				NaN	NaN	0	NaN	7696	4172	11868
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11871	33.735	NaN	4307.7	30	0	1034.1	0.106	+			48673	VTSTFIIEK	9	61	519.2972622278863	1036.5799715225726	2	519.29736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTSTFIIEK_	ENSG00000126561|ENST00000590949|STAT5A;ENSG00000173757|ENST00000293328|STAT5B;ENST00000468312.1_1_17:40370167-40384145:-|nuORF;nc|ENSG00000126561|P42229-2|STAT5A;STAT5B|p.H584Tfs*8|3|0.33|ENSG00000173757|chr17:42210428-42210429|-/T|frameshift_variant;STAT5B|p.K583Nfs*16|2|0.34|ENSG00000173757|chr17:42210429-42210429|T/-|frameshift_variant	96.0336014099291	0.047854655524928534	5				NaN	NaN	0	NaN	7697	4172	11868
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11872	33.737	NaN	1371	30	0	86.578	0.037	+			47347	VPDSSGPERIL	11	55	585.3115096924593	1168.6084664517184	2	585.3107299804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VPDSSGPERIL_	ENSG00000165119|ENST00000376263|HNRNPK;nc|ENSG00000165119|P61978-3|HNRNPK;nc|ENSG00000165119|P61978|HNRNPK	25.125986553469783	0.7262400895305658	5				NaN	NaN	0	NaN	7698	4172	11868
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11883	33.76	NaN	4523.6	30	0	425.01	0.214			+	26715	LVKLSRVTE	9	71	522.8239295358799	1043.6333061385596	2	522.8248291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LVKLSRVTE_	REV__ENSG00000196431|ENST00000354760|CRYBA4	40.77816245573522	0.41113185337114944	5				NaN	NaN	0	NaN	7706	4175	11882
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11884	33.764	NaN	2100.4	30	0	261.73	0.106	+			12452	GEDEPLHAL	9	59	490.7376674242822	979.4607819153645	2	490.7372131347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEDEPLHAL_	ENSG00000168066|ENST00000377390|SF1;nc|ENSG00000168066|Q15637-2|SF1;nc|ENSG00000168066|Q15637-3|SF1;nc|ENSG00000168066|Q15637-4|SF1;nc|ENSG00000168066|Q15637-5|SF1;nc|ENSG00000168066|Q15637-6|SF1;nc|ENSG00000168066|Q15637-7|SF1;SF1|p.V573Sfs*23|1|0.22|ENSG00000168066|chr11:64766025-64766025|G/-|frameshift_variant	71.29570347882199	0.13518600952103718	5				NaN	NaN	0	NaN	7707	4175	11882
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11885	33.766	NaN	7988.3	30	0	912.34	0.106	+			36047	SEISNIARV	9	62	494.77470025015856	987.5348475671171	2	494.77490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEISNIARV_	ENSG00000016490|ENST00000394711|CLCA1	112.10723106719422	0.02684780151337622	5				NaN	NaN	0	NaN	7708	4175	11882
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11886	33.768	NaN	1366.6	30	0	129.67	0.035			+	38213	SQGLDRKSK	9	60	509.78801575244574	NaN	0	509.7885437011719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SQGLDRKSK_	REV__ENSG00000165966|ENST00000402685|PDZRN4;REV__ENST00000548316.1_1_12:41903559-41967689:+|nuORF;REV__nc|ENSG00000165966|Q6ZMN7-2|PDZRN4;REV__nc|ENSG00000165966|Q6ZMN7-4|PDZRN4	29.170058357718403	0.3302935627494407	5				NaN	NaN	0	NaN	7709	4175	11882
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11899	33.795	NaN	28665	30	0	8177	0.214	+			5818	AVIGADSVTLK	11	83	537.3135915112409	1072.6126300892818	2	537.3141479492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVIGADSVTLK_	ENSG00000108651|ENST00000261708|UTP6;ENST00000477860.1_1_17:30200326-30200766:-|nuORF	131.4175700721456	0.0011899986011700767	5				NaN	NaN	0	NaN	7719	4178	11898
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11900	33.799	NaN	4716.9	30	0	438.66	0.106	+			44106	TPVGLIVSH	9	63	461.77131192415976	921.5280709151195	2	461.7712097167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TPVGLIVSH_	ENSG00000136718|ENST00000259239|IMP4;ENST00000460766.5_1_2:131100637-131104038:+|nuORF	138.8255168832474	0.011031062795199845	5				NaN	NaN	0	NaN	7720	4178	11898
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11901	33.801	NaN	2460.1	30	0	215.48	0.106	+			27691	MPVGMTHGL	9	59	471.73052671639743	941.4465004995949	2	471.7303771972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MPVGMTHGL_	ENSG00000092203|ENST00000448790|TOX4;nc|ENSG00000092203|O94842-2|TOX4;TOX4|p.G159Vfs*126|1|0.32|ENSG00000092203|chr14:21488743-21488743|G/-|frameshift_variant;TOX4|p.Q486Hfs*16|1|0.55|ENSG00000092203|chr14:21493073-21493073|A/-|frameshift_variant;TOX4|p.T456Dfs*60|1|0.38|ENSG00000092203|chr14:21492975-21492976|-/C|frameshift_variant	45.9519527083369	0.35044536499095585	5				NaN	NaN	0	NaN	7721	4178	11898
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11902	33.802	NaN	976.52	30	0	75.927	0.033	+			30002	PPITISSK	8	43	421.7528272825611	NaN	0	421.7530212402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PPITISSK_	ENSG00000104722|ENST00000221166|NEFM;nc|ENSG00000104722|P07197-2|NEFM;NEFM|p.G845Vfs*10|1|0.22|ENSG00000104722|chr8:24918384-24918384|G/-|frameshift_variant;NEFM|p.I861Nfs*4|1|0.3|ENSG00000104722|chr8:24918430-24918431|-/A|frameshift_variant;NEFM|p.K721Rfs*18|1|0.25|ENSG00000104722|chr8:24918013-24918013|A/-|frameshift_variant;NEFM|p.K843Nfs*4|1|0.11|ENSG00000104722|chr8:24918383-24918384|-/T|frameshift_variant	51.33545320467046	1.7418937515398478	5				NaN	NaN	0	NaN	7722	4178	11898
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11914	33.828	NaN	2296.6	30	0	732.89	0.214	+			25286	LNSSRPTP	8	51	436.23523149847256	870.4559100637451	2	436.23468017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LNSSRPTP_	ENSG00000102313|ENST00000218436|ITIH6	64.20726635412375	0.4601301477144759	5				NaN	NaN	0	NaN	7731	4181	11913
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11915	33.831	NaN	3798.4	30	0	544.67	0.106			+	38852	SSNRWSTY	8	59	500.72933256908874	NaN	0	500.7295227050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSNRWSTY_	REV__ACVR2B|p.A61T|1|0.39|ENSG00000114739|chr3:38477415-38477415|G/A|missense_variant	37.15910966729921	1.7418937515398478	5				NaN	NaN	0	NaN	7732	4181	11913
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11916	33.833	NaN	1814.1	30	0	190.98	0.106			+	-1	PIIIGGCLM	9	50	487.7559488847453	NaN	0	487.7554931640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))PIIIGGCLM(Oxidation (M))_	REV__ENST00000371361.3_1_10:96097612-96098423:-|nuORF	39.021493756699265	0.2805557132942146	5				NaN	NaN	0	NaN	7733	4181	11913
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11917	33.835	NaN	1606.5	30	0	168.6	0.106	+			19602	KDFETWLDNIS	11	64	684.3275158184628	NaN	0	684.327880859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KDFETWLDNIS_	ENSG00000119402|ENST00000608872|FBXW2;nc|ENSG00000119402|Q9UKT8-2|FBXW2	41.080066990542036	0.3793850210388171	5				NaN	NaN	0	NaN	7734	4181	11913
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11918	33.837	NaN	1610	30	0	132.07	0.106			+	-1	LHSQLCAELC	10	63	587.2761138022197	NaN	0	587.275390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_LHSQLCAELC(Carbamidomethyl (C))_	REV__KRT75|p.G531Afs*52|1|0.28|ENSG00000170454|chr12:52424581-52424581|C/-|frameshift_variant	31.529811441608018	0.39664753963064203	5				NaN	NaN	0	NaN	7735	4181	11913
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11919	33.839	NaN	2089.7	30	0	318.55	0.106	+			1467	AFHKTAYI	8	55	475.7596740722656	NaN	0	475.7596740722656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AFHKTAYI_	ENST00000468123.1_1_2:202340421-202342983:+|nuORF	47.91560031466742	1.7418937515398478	5				NaN	NaN	0	NaN	7736	4181	11913
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11920	33.841	NaN	1218.1	30	0	142.07	0.037	+			23556	LALAIGAKTYK	11	59	574.8563888796878	NaN	0	574.8570556640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LALAIGAKTYK_	CAD|p.N1541Mfs*15|1|0.33|ENSG00000084774|chr2:27237773-27237773|A/-|frameshift_variant;CAD|p.Q1172Tfs*37|1|0.41|ENSG00000084774|chr2:27234113-27234114|-/C|frameshift_variant;CAD|p.Q902Hfs*2|1|0.42|ENSG00000084774|chr2:27232507-27232508|AG/-|frameshift_variant;ENSG00000084774|ENST00000264705|CAD	21.0322348234405	0.456735970842152	5				NaN	NaN	0	NaN	7737	4181	11913
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11935	33.872	NaN	5941	30	0	701.35	0.214	+			17581	IEAVQLAI	8	61	428.7615432391466	855.5085335450932	2	428.76605224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IEAVQLAI_	tr|U7SKG3|U7SKG3_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01983PE=4SV=1	68.78682469695295	0.41700713582915416	5				NaN	NaN	0	NaN	7749	4184	11934
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11936	33.876	NaN	3716.5	30	0	552.17	0.106	+			35479	SATETCYTY	9	61	519.7076573428016	1037.400761752403	2	519.708740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SATETCYTY_	ENSG00000132465|ENST00000254801|JCHAIN	66.42927471994793	0.16001998865088202	5				NaN	NaN	0	NaN	7750	4184	11934
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11937	33.878	NaN	11638	30	0	7740.6	0.106	+			5990	AVLSWKLAK	9	38	339.21476207173725	1014.6224568154119	3	339.2147216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVLSWKLAK_	ENSG00000188725|ENST00000339020|SMIM15;SMIM15|p.M47T|1|0.4|ENSG00000188725|chr5:61160032-61160032|A/G|missense_variant	26.79610172149135	0.5528238334041078	5				NaN	NaN	0	NaN	7751	4184	11934
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11938	33.879	NaN	3308.8	30	0	704.17	0.106	+			49430	VVVDPIQSVK	10	67	542.3239228180923	1082.6332927029846	2	542.3245239257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVVDPIQSVK_	ENSG00000115233|ENST00000409682|PSMD14	36.446750945000026	0.5818864909973037	5				NaN	NaN	0	NaN	7752	4184	11934
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11939	33.881	NaN	2545	30	0	479.92	0.106			+	37611	SLPSTMRTI	9	57	503.2722702165263	NaN	0	503.2719421386719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SLPSTMRTI_	REV__ENST00000370418.7_1_10:101816855-101825078:-|nuORF	49.44154591367651	0.21054156626303966	5				NaN	NaN	0	NaN	7753	4184	11934
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11940	33.883	NaN	1598	30	0	164.64	0.106				-1	MNNYKVLI	8	64	505.77025390472016	NaN	0	505.7706298828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_M(Oxidation (M))NNYKVLI_	CPVL|p.V418Ffs*24|1|0.39|ENSG00000106066|chr7:29030646-29030646|T/-|frameshift_variant;ENSG00000106066|ENST00000265394|CPVL	31.954861631926434	1.7418937515398478	5				NaN	NaN	0	NaN	7754	4184	11934
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11941	33.885	NaN	1852.3	30	0	261.25	0.033				-1	 	0	44	423.26551606881753	844.5164792044351	2	423.26593017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7755	4184	11934
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11954	33.912	NaN	5505.1	30	0	728.36	0.214	+			29176	NVIRDAVTY	9	69	525.782079048411	1049.549605163622	2	525.7831420898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NVIRDAVTY_	ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2	65.46538089061403	0.16805504838372562	5				NaN	NaN	0	NaN	7765	4187	11953
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11955	33.916	NaN	4944.3	30	0	741.62	0.106	+			12504	GEEKLIASV	9	66	473.26603122408034	944.5175095149607	2	473.2657775878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEEKLIASV_	ENSG00000130713|ENST00000372358|EXOSC2;ENST00000430138.6_1_9:133569178-133570981:+|nuORF;ENST00000463488.1_1_9:133569202-133574940:+|nuORF;ENST00000491115.6_1_9:133569178-133574746:+|nuORF;nc|ENSG00000130713|Q13868-2|EXOSC2;nc|ENSG00000130713|Q13868-3|EXOSC2	70.8162118820467	0.13725933411854815	5				NaN	NaN	0	NaN	7766	4187	11953
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11956	33.918	NaN	2063.1	30	0	505.74	0.106	+			1285	AESKNGWTL	9	57	503.2531198755581	1004.4916868179163	2	503.2526550292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AESKNGWTL_	ENSG00000110048|ENST00000263847|OSBP	52.936696900407355	0.27249468807391813	5				NaN	NaN	0	NaN	7767	4187	11953
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11957	33.919	NaN	2142.2	30	0	153.77	0.106			+	13435	GLGVWLVVQ	9	64	485.78756526506373	969.5605775969275	2	485.7873840332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GLGVWLVVQ_	REV__ENSG00000157637|ENST00000374759|SLC38A10;REV__nc|ENSG00000157637|Q9HBR0-2|SLC38A10;REV__nc|ENSG00000157637|Q9HBR0-3|SLC38A10	52.29916861842294	0.2778091507991977	5				NaN	NaN	0	NaN	7768	4187	11953
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11958	33.921	NaN	1223	30	0	131.52	0.106			+	-1	FAFICAMAL	9	56	522.2551075852663	1042.4956622373325	2	522.2560424804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_FAFIC(Carbamidomethyl (C))AMAL_	REV__ENSG00000133460|ENST00000316185|SLC2A11;REV__ENST00000461809.5_1_22:24225898-24227033:+|nuORF;REV__ENST00000486907.1_1_22:24225919-24226291:+|nuORF;REV__ENST00000489322.5_1_22:24224791-24226291:+|nuORF;REV__nc|ENSG00000133460|Q9BYW1-4|SLC2A11;REV__nc|ENSG00000133460|Q9BYW1|SLC2A11	39.021493756699265	0.43173687394350213	5				NaN	NaN	0	NaN	7769	4187	11953
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11959	33.923	NaN	2616.9	30	0	347.84	0.106	+			50631	YEAVREVL	8	52	489.7661880848714	977.5178232365428	2	489.76531982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YEAVREVL_	ENSG00000198755|ENST00000322203|RPL10A;ENST00000464112.5_1_6:35436546-35438524:+|nuORF;ENST00000467020.5_1_6:35436211-35436817:+|nuORF;ENST00000472730.1_1_3:61728131-61728755:-|nuORF;ENST00000490335.4_1_6:35436211-35436651:+|nuORF;RPL10A|p.P135Lfs*17|1|0.35|ENSG00000198755|chr6:35470270-35470270|C/-|frameshift_variant	42.86426827375447	0.638539151166014	5				NaN	NaN	0	NaN	7770	4187	11953
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11960	33.925	NaN	851.63	30	0	153.66	0.033	+			48713	VTTREVVV	8	42	451.76855992072234	901.5225669082447	2	451.769287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VTTREVVV_	ENST00000429118.1_1_9:94374035-94374428:+|nuORF	25.450171626174864	0.7628259754767981	5				NaN	NaN	0	NaN	7771	4187	11953
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11967	33.943	NaN	2302.4	30	0	307.95	0.214	+			484	AAYDSLVVGK	10	56	511.7795967504408	1021.5446405676817	2	511.7791748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAYDSLVVGK_	ENSG00000128283|ENST00000249014|CDC42EP1;nc|ENSG00000128283|Q00587-2|CDC42EP1	47.95952297671804	0.47580206326914537	5				NaN	NaN	0	NaN	7775	4190	11966
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11968	33.946	NaN	1375	30	0	124.62	0.106			+	7973	DSTLVNVLV	9	57	480.2738558506159	958.5331587680319	2	480.2734680175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DSTLVNVLV_	REV__ENSG00000115234|ENST00000233575|SNX17;REV__ENST00000440760.5_1_2:27594325-27599583:+|nuORF;REV__ENST00000494893.5_1_2:27594167-27597059:+|nuORF;REV__nc|ENSG00000115234|Q15036-2|SNX17;REV__SNX17|p.A438Gfs*17|1|0.14|ENSG00000115234|chr2:27376619-27376620|CC/-|frameshift_variant	54.776311868738084	0.25715957988447635	5				NaN	NaN	0	NaN	7776	4190	11966
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11969	33.948	NaN	6166.4	30	0	670.5	0.106	+			39651	STIEYVIQR	9	75	554.8031778273203	1107.5918027214404	2	554.8043212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STIEYVIQR_	ENSG00000101310|ENST00000650089|SEC23B	176.08678752253132	0.0017279326439731339	5				NaN	NaN	0	NaN	7777	4190	11966
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11970	33.95	NaN	3986.4	30	0	546.84	0.106	+			10063	ESGVLVLRE	9	63	501.2846985466661	1000.5548441601322	2	501.2852783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ESGVLVLRE_	ENSG00000063438|ENST00000684583|AHRR;nc|ENSG00000063438|A9YTQ3-2|AHRR;nc|ENSG00000063438|A9YTQ3-3|AHRR;nc|ENSG00000063438|A9YTQ3|AHRR	60.11826168202944	0.21262886028301267	5				NaN	NaN	0	NaN	7778	4190	11966
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11971	33.952	NaN	1770.2	30	0	327.53	0.106	+			15281	GTVAFALTK	9	47	454.2658719365188	906.5171909398376	2	454.2656555175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTVAFALTK_	ENSG00000127080|ENST00000287996|IPPK	51.19269402634007	0.2889735674168909	5				NaN	NaN	0	NaN	7779	4190	11966
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11972	33.954	NaN	1584.4	30	0	287.44	0.034	+			47213	VMASSVVPK	9	49	459.2598433383899	916.5051337435798	2	459.2593688964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VMASSVVPK_	ENSG00000226288|ENST00000641896|OR52I2;ENSG00000232268|ENST00000530443|OR52I1;nc|ENSG00000226288|Q8NH67|OR52I2;OR52I1|p.V86A|1|0.26|ENSG00000232268|chr11:4594295-4594295|T/C|missense_variant	47.91560031466742	0.327412564698279	5				NaN	NaN	0	NaN	7780	4190	11966
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11973	33.954	NaN	2064.2	30	0	101.84	0.139			+	7720	DLSILGLIAG	10	67	486.2911682128906	NaN	0	486.2911682128906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DLSILGLIAG_	REV__ENSG00000212807|ENST00000641810|OR2A42;REV__ENSG00000221970|ENST00000641044|OR2A1;REV__OR2A1|p.V68Sfs*30|1|0.04|ENSG00000221970|chr7:144318325-144318325|C/-|frameshift_variant	45.9519527083369	0.331194823726099	5				NaN	NaN	0	NaN	7781	4190	11966
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11996	34.009	NaN	4576.8	30	0	544.81	0.214	+			3048	ASFILGTGK	9	54	447.2580920396324	892.5016311460648	2	447.2581481933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASFILGTGK_	CDCA2|p.N847Mfs*14|1|0.15|ENSG00000184661|chr8:25507200-25507200|A/-|frameshift_variant;ENSG00000184661|ENST00000330560|CDCA2;nc|ENSG00000184661|Q69YH5-2|CDCA2	112.10723106719422	0.02684780151337622	5				NaN	NaN	0	NaN	7798	4196	11995
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11997	34.012	NaN	3156	30	0	391.04	0.106	+			26079	LSLVLSPGA	9	52	428.7615432391466	855.5085335450932	2	428.7610168457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSLVLSPGA_	ENST00000593726.5_1_19:41305476-41306130:+|nuORF	102.7733458925114	0.03637199559902695	5				NaN	NaN	0	NaN	7799	4196	11995
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11998	34.014	NaN	7100.2	30	0	4374.9	0.106	+			41289	SVLLFVTKK	9	41	345.55839824125667	1033.65336532397	3	345.5585021972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVLLFVTKK_	ENSG00000198231|ENST00000389924|DDX42;ENST00000578593.1_1_17:61889231-61895755:+|nuORF;nc|ENSG00000198231|Q86XP3-2|DDX42	47.95952297671804	0.32689736945648856	5				NaN	NaN	0	NaN	7800	4196	11995
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11999	34.016	NaN	2259.1	30	0	177.69	0.106	+			21434	KNASRPMVI	9	61	508.28885438272647	1014.563155832253	2	508.2895202636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KNASRPMVI_	ENSG00000092853|ENST00000318121|CLSPN;nc|ENSG00000092853|Q9HAW4-2|CLSPN;nc|ENSG00000092853|Q9HAW4-3|CLSPN	47.657333605630114	0.33044192980041115	5				NaN	NaN	0	NaN	7801	4196	11995
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12000	34.018	NaN	2064.5	30	0	542.04	0.106	+			25109	LLPPPALK	8	43	424.7836392405931	847.5527255479863	2	424.7837219238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LLPPPALK_	ARHGAP31|p.S671L|1|0.05|ENSG00000031081|chr3:119413941-119413941|C/T|missense_variant;ENSG00000120341|ENST00000308284|SEC16B;ENST00000464428.2_1_1:177898995-177929556:-|nuORF;ENST00000466953.6_1_1:177898995-177928232:-|nuORF	28.2542754592877	0.7411748056684583	5				NaN	NaN	0	NaN	7802	4196	11995
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12001	34.02	NaN	2398.2	30	0	747.12	0.039	+			51544	YYDKHFTEF	9	39	417.1889018600826	NaN	0	417.1890869140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YYDKHFTEF_	ENSG00000114573|ENST00000273398|ATP6V1A;nc|ENSG00000114573|P38606-2|ATP6V1A	33.51558372728122	0.30835390848773375	5				NaN	NaN	0	NaN	7803	4196	11995
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12002	34.02	NaN	1665.5	30	0	94.885	0.141			+	-1	NKNRYIEL	8	67	546.2985200158971	NaN	0	546.2990112304688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))NKNRYIEL_	REV__ENSG00000109927|ENST00000392793|TECTA;REV__TECTA|p.D2032Gfs*22|1|0.13|ENSG00000109927|chr11:121187922-121187923|-/G|frameshift_variant;REV__TECTA|p.S803L|1|0.11|ENSG00000109927|chr11:121129678-121129678|C/T|missense_variant	47.91560031466742	1.7418937515398478	5				NaN	NaN	0	NaN	7804	4196	11995
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12015	34.049	NaN	14228	30	0	4281.5	0.214	+			4646	ATLPPITVTSK	11	75	564.337004507664	1126.659456082128	2	564.33740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATLPPITVTSK_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	58.62960593111931	0.3356877741313683	5				NaN	NaN	0	NaN	7814	4199	12014
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12016	34.053	NaN	1731.9	30	0	165.03	0.106	+			45254	TVQELAIYK	9	65	532.8029372141258	1063.5913214950515	2	532.8037719726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVQELAIYK_	ENSG00000102595|ENST00000376747|UGGT2;nc|ENSG00000102595|Q9NYU1-2|UGGT2;UGGT2|p.N1268Ifs*10|1|0.3|ENSG00000102595|chr13:95859613-95859613|T/-|frameshift_variant	47.95952297671804	0.32689736945648856	5				NaN	NaN	0	NaN	7815	4199	12014
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12017	34.055	NaN	2359.9	30	0	130.01	0.106			+	37348	SLETFTQLV	9	64	519.2795006622983	1036.5444483913966	2	519.7822875976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLETFTQLV_	REV__ENSG00000118094|ENST00000264029|TREH;REV__nc|ENSG00000118094|O43280-2|TREH;REV__TREH|p.Q114Sfs*29|1|0.12|ENSG00000118094|chr11:118662964-118662964|G/-|frameshift_variant	37.81151784470057	0.4459294069877048	5				NaN	NaN	0	NaN	7816	4199	12014
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12018	34.057	NaN	2449.4	30	0	210.64	0.106	+			28710	NNITMLVPGG	10	59	508.2636559155079	1014.5127588978158	2	508.2648010253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NNITMLVPGG_	ENSG00000106355|ENST00000450169|LSM5;ENST00000468872.5_1_7:32526875-32527392:-|nuORF;nc|ENSG00000106355|Q9Y4Y9-2|LSM5	54.776311868738084	0.41334902933431344	5				NaN	NaN	0	NaN	7817	4199	12014
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12019	34.059	NaN	1255.2	30	0	135.57	0.106				-1	VMKGMTLMM	9	60	529.2500610351562	NaN	0	529.2500610351562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_VMKGMTLMM(Oxidation (M))_	ENST00000265807.7_1_8:19252286-19252430:+|nuORF	33.51558372728122	0.30835390848773375	5				NaN	NaN	0	NaN	7818	4199	12014
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12020	34.06	NaN	2359.3	30	0	1099.6	0.037			+	46869	VILGHVTAGML	11	36	370.8841736265307	NaN	0	370.8841857910156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VILGHVTAGML_	REV__ENSG00000205639|ENST00000338315|MFSD2B	33.921630207806714	0.41424167740351664	5				NaN	NaN	0	NaN	7819	4199	12014
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12027	34.077	NaN	5066.1	30	0	977.41	0.214	+			42876	TEGYQPPPV	9	61	494.2425483979247	986.4705438626494	2	494.24224853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEGYQPPPV_	ENSG00000108639|ENST00000225777|SYNGR2;ENST00000592456.1_1_17:76167504-76168014:+|nuORF	65.46538089061403	0.16805504838372562	5				NaN	NaN	0	NaN	7823	4202	12026
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12028	34.08	NaN	3988.3	30	0	389.53	0.106			+	-1	TLMMRYYK	8	69	569.2765833116896	1136.538613690179	2	569.27685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Oxidation (M)	_TLM(Oxidation (M))M(Oxidation (M))RYYK_	REV__ENSG00000163114|ENST00000295266|PDHA2	50.0245360154114	0.5941082100236891	5				NaN	NaN	0	NaN	7824	4202	12026
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12029	34.082	NaN	1569.3	30	0	276.89	0.106	+			47348	VPDSSGPERIL	11	59	585.3115096924593	1168.6084664517184	2	585.3112182617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VPDSSGPERIL_	ENSG00000165119|ENST00000376263|HNRNPK;nc|ENSG00000165119|P61978-3|HNRNPK;nc|ENSG00000165119|P61978|HNRNPK	29.550750289552195	0.6798279264880025	5				NaN	NaN	0	NaN	7825	4202	12026
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12030	34.084	NaN	4119	30	0	471.76	0.106	+			47882	VSLGTPIMK	9	65	473.2751061154604	944.5356592977208	2	473.2742004394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSLGTPIMK_	ECT2|p.K832Rfs*25|1|0.1|ENSG00000114346|chr3:172815693-172815693|A/-|frameshift_variant;ENSG00000114346|ENST00000392692|ECT2;nc|ENSG00000114346|Q9H8V3-2|ECT2;nc|ENSG00000114346|Q9H8V3-3|ECT2;nc|ENSG00000114346|Q9H8V3-4|ECT2	75.04331003522576	0.118981335847003	5				NaN	NaN	0	NaN	7826	4202	12026
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12031	34.086	NaN	2259.9	30	0	669.77	0.106	+			43144	TESPAALKL	9	55	465.2688891427508	928.5232253523017	2	465.2684631347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TESPAALKL_	ENSG00000130762|ENST00000378378|ARHGEF16	79.45101966838831	0.09992237243120712	5				NaN	NaN	0	NaN	7827	4202	12026
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12032	34.088	NaN	1453.6	30	0	345.97	0.106			+	7409	DEKDFSIDF	9	61	558.2486805652379	1114.4828081972757	2	558.2503051757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DEKDFSIDF_	REV__CAMSAP2|p.K1052Rfs*43|1|0.32|ENSG00000118200|chr1:200849887-200849887|A/-|frameshift_variant;REV__CAMSAP2|p.M1437*|7|0.32|ENSG00000118200|chr1:200857892-200857892|A/-|frameshift_variant;REV__ENSG00000118200|ENST00000358823|CAMSAP2;REV__nc|ENSG00000118200|Q08AD1-2|CAMSAP2;REV__nc|ENSG00000118200|Q08AD1|CAMSAP2	30.503639358989545	0.5181749237905803	5				NaN	NaN	0	NaN	7828	4202	12026
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12033	34.09	NaN	2450	30	0	488.94	0.034			+	26035	LSLGVLVSAG	10	50	458.27866024307997	914.54276755296	2	458.2789306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSLGVLVSAG_	REV__ENSG00000088836|ENST00000642402|SLC4A11;REV__nc|ENSG00000088836|Q8NBS3-1|SLC4A11;REV__nc|ENSG00000088836|Q8NBS3-2|SLC4A11;REV__nc|ENSG00000088836|Q8NBS3-4|SLC4A11;REV__nc|ENSG00000088836|Q8NBS3-5|SLC4A11	58.78195531508484	0.37691818691852547	5				NaN	NaN	0	NaN	7829	4202	12026
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12046	34.117	NaN	2294.1	30	0	351.52	0.214	+			1159	AENEYQTAI	9	60	519.7405771193422	1037.4666013054843	2	519.7413940429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AENEYQTAI_	ENSG00000116489|ENST00000263168|CAPZA1;ENSG00000198898|ENST00000361183|CAPZA2;ENST00000426421.5_1_7:116544367-116557918:+|nuORF;ENST00000466066.1_1_1:113202257-113212751:+|nuORF;ENST00000565906.2_1_15:89532752-89533049:-|nuORF	41.42661286455405	0.403525789677298	5				NaN	NaN	0	NaN	7839	4205	12045
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12047	34.12	NaN	6471.8	30	0	1449.1	0.106	+			14565	GTFLEGVAK	9	58	461.255459898557	920.496366863914	2	461.2554626464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTFLEGVAK_	ENSG00000174886|ENST00000308961|NDUFA11;ENST00000593233.1_1_19:5894755-5901370:-|nuORF;nc|ENSG00000174886|Q86Y39-2|NDUFA11	112.41091882917199	0.026537921851008135	5				NaN	NaN	0	NaN	7840	4205	12045
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12048	34.122	NaN	1602.8	30	0	128.4	0.106			+	49049	VVIMVFELI	9	60	531.8179663562668	1061.6213797793334	2	531.8178100585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVIMVFELI_	REV__ENSG00000117013|ENST00000347132|KCNQ4;REV__ENSG00000185760|ENST00000370398|KCNQ5;REV__KCNQ5|p.T221Nfs*4|1|0.25|ENSG00000185760|chr6:73077361-73077362|-/A|frameshift_variant;REV__nc|ENSG00000117013|P56696-2|KCNQ4;REV__nc|ENSG00000185760|Q9NR82-2|KCNQ5;REV__nc|ENSG00000185760|Q9NR82-3|KCNQ5;REV__nc|ENSG00000185760|Q9NR82-4|KCNQ5;REV__nc|ENSG00000185760|Q9NR82-5|KCNQ5;REV__nc|ENSG00000185760|Q9NR82-6|KCNQ5;REV__nc|ENSG00000185760|Q9NR82-7|KCNQ5	42.47446043378293	0.39123495718708534	5				NaN	NaN	0	NaN	7841	4205	12045
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12049	34.124	NaN	3841.2	30	0	2168.1	0.045			+	-1	CRRRFVFVFYW	11	64	559.9553306576502	1676.8441625731502	3	559.95654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))C(Carbamidomethyl (C))RRRFVFVFYW_	REV__ENST00000507721.5_1_4:83346026-83346083:-|nuORF	1.5229847967890655	0.8889384911710808	5				NaN	NaN	0	NaN	7842	4205	12045
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12061	34.15	NaN	4976.8	30	0	590.84	0.214	+			27176	MDLGWLALL	9	63	524.2799336445463	1046.5453143558925	2	524.2818603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))DLGWLALL_	ENST00000475470.1_1_3:9882101-9883869:-|nuORF	76.84663266511073	0.11118375776443899	5				NaN	NaN	0	NaN	7851	4208	12060
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12062	34.153	NaN	1667.3	30	0	88.517	0.106	+			12518	GEEVVRVL	8	52	450.7607263890341	899.5068998448683	2	450.75994873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEEVVRVL_	ENSG00000100726|ENST00000262319|TELO2;TELO2|p.Q444Sfs*63|1|0.32|ENSG00000100726|chr16:1501463-1501463|C/-|frameshift_variant	74.25504064058377	0.37144338840759816	5				NaN	NaN	0	NaN	7852	4208	12060
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12063	34.155	NaN	1777.6	30	0	152.46	0.034			+	30322	PTQTAETTL	9	56	481.2458830669199	960.4772132006398	2	481.2452087402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PTQTAETTL_	REV__ENSG00000137804|ENST00000559596|NUSAP1;REV__nc|ENSG00000137804|Q9BXS6-2|NUSAP1;REV__nc|ENSG00000137804|Q9BXS6-3|NUSAP1;REV__nc|ENSG00000137804|Q9BXS6-4|NUSAP1;REV__nc|ENSG00000137804|Q9BXS6-5|NUSAP1;REV__nc|ENSG00000137804|Q9BXS6-6|NUSAP1	41.42661286455405	0.403525789677298	5				NaN	NaN	0	NaN	7853	4208	12060
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12076	34.183	NaN	4247.7	30	0	784.87	0.214	+			5764	AVGLVLPAK	9	55	434.2868161406289	866.5590793480578	2	434.286865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVGLVLPAK_	ENSG00000162496|ENST00000616661|DHRS3;nc|ENSG00000162496|O75911-2|DHRS3	79.9392285194092	0.09781135437301468	5				NaN	NaN	0	NaN	7863	4211	12075
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12077	34.186	NaN	2831.8	30	0	628.85	0.106			+	6815	CGVLTIGAL	9	58	452.25046991308216	902.4863868929643	2	452.2497863769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_C(Carbamidomethyl (C))GVLTIGAL_	REV__ENSG00000138834|ENST00000610761|MAPK8IP3;REV__nc|ENSG00000138834|Q9UPT6|MAPK8IP3	52.29916861842294	0.2778091507991977	5				NaN	NaN	0	NaN	7864	4211	12075
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12078	34.188	NaN	1527	30	0	150.55	0.106			+	-1	KWNCSMLTQSI	11	61	684.3275158184628	NaN	0	684.32763671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_KWNC(Carbamidomethyl (C))SMLTQSI_	REV__ENST00000367942.3_1_1:161748048-161751741:+|nuORF	38.753607047826485	0.39270760338352134	5				NaN	NaN	0	NaN	7865	4211	12075
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12079	34.19	NaN	2755.9	30	0	216.09	0.106			+	-1	KVSLFIFSM	9	63	544.2981378627836	1086.5817227923671	2	544.2999267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_KVSLFIFSM(Oxidation (M))_	REV__ENSG00000088053|ENST00000310373|GP6	42.396135135203025	0.392153681582562	5				NaN	NaN	0	NaN	7866	4211	12075
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12080	34.192	NaN	1049.8	30	0	188.67	0.106	+			11425	FLTALAGA	8	32	382.22059520595616	NaN	0	382.220703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FLTALAGA_	DCD|p.G79Dfs*5|1|0.43|ENSG00000161634|chr12:54645226-54645226|C/-|frameshift_variant;ENSG00000161634|ENST00000293371|DCD;nc|ENSG00000161634|P81605-2|DCD;nc|ENSG00000161634|P81605-3|DCD	52.29916861842294	1.7418937515398478	5				NaN	NaN	0	NaN	7867	4211	12075
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12081	34.194	NaN	1235.6	30	0	139.76	0.034	+			35813	SEAQVHLAL	9	52	484.2643127441406	NaN	0	484.2643127441406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SEAQVHLAL_	ENSG00000090339|ENST00000264832|ICAM1	37.15910966729921	0.2899585034171616	5				NaN	NaN	0	NaN	7868	4211	12075
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12093	34.219	NaN	4252.9	30	0	2138.7	0.215	+			23468	LAELGLLEQ	9	65	493.28167422447063	984.5487955157413	2	493.2817077636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LAELGLLEQ_	ENST00000598734.1_1_19:39421606-39422228:+|nuORF	60.97194046774394	0.20551255781574032	5				NaN	NaN	0	NaN	7877	4214	12092
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12094	34.223	NaN	6169.6	30	0	759.58	0.035	+			41142	SVIVQPFSK	9	67	502.7922216848585	1003.569890436517	2	502.792236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVIVQPFSK_	ENSG00000137871|ENST00000267807|ZNF280D;nc|ENSG00000285253|Q6N043-2|ZNF280D;nc|ENSG00000285253|Q6N043-3|ZNF280D;nc|ENSG00000285253|Q6N043-6|ZNF280D	83.6470233535746	0.08277643980271215	5				NaN	NaN	0	NaN	7878	4214	12092
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12103	34.243	NaN	8197.4	30	0	1387.1	0.214	+			51424	YTVSKLQVL	9	81	525.8131048468372	1049.6116567604743	2	525.8135986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YTVSKLQVL_	ENSG00000179270|ENST00000331664|PCARE	51.19269402634007	0.2889735674168909	5				NaN	NaN	0	NaN	7884	4217	12102
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12104	34.246	NaN	1942.2	30	0	270.66	0.106	+			28747	NPADSISHVAY	11	66	587.2803061378839	1172.5460593425678	2	587.2803344726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NPADSISHVAY_	ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;TRRAP-ASNS|1|fusion;TRRAP-ASNS|2|fusion;TRRAP|p.A1620Cfs*35|1|0.27|ENSG00000196367|chr7:98949499-98949500|-/G|frameshift_variant;TRRAP|p.K3443Sfs*19|1|0.28|ENSG00000196367|chr7:99004246-99004246|A/-|frameshift_variant;TRRAP|p.P1292Lfs*17|1|0.44|ENSG00000196367|chr7:98933258-98933258|C/-|frameshift_variant;TRRAP|p.P1360Afs*14|1|0.05|ENSG00000196367|chr7:98935641-98935642|-/GCAAATAA|frameshift_variant	82.7504851949679	0.12944296023181348	5				NaN	NaN	0	NaN	7885	4217	12102
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12105	34.248	NaN	1278.5	30	0	136.67	0.035			+	51499	YVNISSVLV	9	52	497.28504823460526	NaN	0	497.2850036621094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YVNISSVLV_	REV__nc|ENSG00000050628|P43115-5|PTGER3	31.529811441608018	0.3183796599642538	5				NaN	NaN	0	NaN	7886	4217	12102
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12116	34.272	NaN	1526.7	30	0	146.28	0.214			+	7368	DDLMQKVLQG	10	65	573.7948080632673	1145.5750631933345	2	573.7958374023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DDLMQKVLQG_	REV__ENSG00000126088|ENST00000246337|UROD	27.882242232435846	0.6521336255503853	5				NaN	NaN	0	NaN	7894	4220	12115
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12117	34.276	NaN	1830	30	0	207.54	0.035			+	10238	ETILGESRL	9	63	509.2823553807435	1016.5501578282871	2	509.2825622558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ETILGESRL_	REV__CDK5RAP2|p.L1409*|1|0.2|ENSG00000136861|chr9:120415111-120415111|A/-|frameshift_variant;REV__CDK5RAP2|p.N746Kfs*10|1|0.2|ENSG00000136861|chr9:120458587-120458588|-/T|frameshift_variant;REV__CDK5RAP2|p.P1012Lfs*62|1|0.27|ENSG00000136861|chr9:120443733-120443733|G/-|frameshift_variant;REV__ENSG00000136861|ENST00000349780|CDK5RAP2;REV__ENST00000483412.5_1_9:123170580-123298708:-|nuORF;REV__nc|ENSG00000136861|Q96SN8-2|CDK5RAP2;REV__nc|ENSG00000136861|Q96SN8-3|CDK5RAP2;REV__nc|ENSG00000136861|Q96SN8-4|CDK5RAP2	52.936696900407355	0.27249468807391813	5				NaN	NaN	0	NaN	7895	4220	12115
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12130	34.303	NaN	2439	30	0	268.19	0.214	+			39652	STIEYVIQR	9	59	554.8031778273203	1107.5918027214404	2	554.8036499023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STIEYVIQR_	ENSG00000101310|ENST00000650089|SEC23B	75.04331003522576	0.118981335847003	5				NaN	NaN	0	NaN	7905	4223	12129
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12131	34.306	NaN	1224.6	30	0	88.421	0.106	+			29380	PALHIGSIS	9	55	447.7554964922119	NaN	0	447.7554931640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PALHIGSIS_	ENSG00000120328|ENST00000239450|PCDHB12;nc|ENSG00000120328|Q9Y5F1-2|PCDHB12;PCDHB6|p.V471I|1|0.4|ENSG00000113211|chr5:141151668-141151668|G/A|missense_variant	50.0245360154114	0.20652386741182333	5				NaN	NaN	0	NaN	7906	4223	12129
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12132	34.308	NaN	2176.3	30	0	346.73	0.106	+			14900	GTLSSYIVK	9	52	484.2762721347595	966.537991336319	2	484.2761535644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTLSSYIVK_	ENSG00000082068|ENST00000265107|WDR70	51.19269402634007	0.2889735674168909	5				NaN	NaN	0	NaN	7907	4223	12129
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12133	34.31	NaN	2954.8	30	0	228.98	0.106	+			39886	STLQVGSLNVK	11	67	573.3297964956121	1144.645040058024	2	573.3292846679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STLQVGSLNVK_	ENSG00000063854|ENST00000397356|HAGH;ENST00000569700.5_1_16:1869077-1876788:-|nuORF;nc|ENSG00000063854|Q16775-2|HAGH	73.90049950687481	0.20322248490973555	5				NaN	NaN	0	NaN	7908	4223	12129
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12134	34.312	NaN	2074	30	0	223.22	0.106			+	29507	PDLESTRH	8	58	477.7369469605491	NaN	0	477.7371520996094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PDLESTRH_	REV__nc|ENSG00000161649|Q6UXG3-2|CD300LG	37.15910966729921	1.7418937515398478	5				NaN	NaN	0	NaN	7909	4223	12129
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12135	34.314	NaN	1816.1	30	0	139.99	0.106			+	12193	GAPLASLGCK	10	56	487.2585279294468	NaN	0	487.2586364746094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_GAPLASLGC(Carbamidomethyl (C))K_	REV__ENSG00000185924|ENST00000331238|RTN4RL1	49.44154591367651	0.30913310806145605	5				NaN	NaN	0	NaN	7910	4223	12129
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12136	34.316	NaN	512.9	30	0	136.67	0.036	+			13409	GLFPVHAKGP	10	22	341.5319519042969	NaN	0	341.5319519042969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GLFPVHAKGP_	ENSG00000196277|ENST00000357716|GRM7;GRM7|p.E384Kfs*28|1|0.36|ENSG00000196277|chr3:7415132-7415132|A/-|frameshift_variant;GRM7|p.F809Lfs*21|1|0.35|ENSG00000196277|chr3:7579326-7579326|T/-|frameshift_variant;GRM7|p.K906Efs*6|1|0.11|ENSG00000196277|chr3:7740366-7740367|-/A|frameshift_variant;GRM7|p.W590Gfs*3|1|0.29|ENSG00000196277|chr3:7578669-7578669|C/-|frameshift_variant;nc|ENSG00000196277|Q14831-2|GRM7;nc|ENSG00000196277|Q14831-3|GRM7;nc|ENSG00000196277|Q14831-4|GRM7;nc|ENSG00000196277|Q14831-5|GRM7	18.262085536374414	0.4201028297492154	5				NaN	NaN	0	NaN	7911	4223	12129
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12147	34.341	NaN	3779.6	30	0	633.7	0.214	+			50829	YETEGIRGL	9	72	519.2676241504666	NaN	0	519.26708984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YETEGIRGL_	ENSG00000076003|ENST00000264156|MCM6;MCM6|p.K365Nfs*6|1|0.23|ENSG00000076003|chr2:135862732-135862732|T/-|frameshift_variant;MCM6|p.R771Efs*3|1|0.33|ENSG00000076003|chr2:135844583-135844583|T/-|frameshift_variant	67.49366992349736	0.1173583512313808	5				NaN	NaN	0	NaN	7919	4226	12146
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12148	34.345	NaN	2076.1	30	0	231.06	0.106	+			27329	MIAIFMISF	9	64	536.7819452671339	NaN	0	536.780517578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MIAIFMISF_	tr|U7T1W4|U7T1W4_FUSNUMATEeffluxfamilyproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00610PE=4SV=1	47.657333605630114	0.2228375344433429	5				NaN	NaN	0	NaN	7920	4226	12146
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12149	34.346	NaN	2105.3	30	0	120.11	0.034			+	24326	LFIGLSAAY	9	62	477.76813736730907	953.5217218014182	2	478.2396240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LFIGLSAAY_	REV__ADAD2|p.L200*|1|0.19|ENSG00000140955|chr16:84194966-84194966|C/-|frameshift_variant;REV__ADAD2|p.T355Pfs*22|1|0.26|ENSG00000140955|chr16:84195819-84195819|C/-|frameshift_variant;REV__ENSG00000140955|ENST00000315906|ADAD2;REV__nc|ENSG00000140955|Q8NCV1-2|ADAD2	40.5726180659479	0.4135428067754104	5				NaN	NaN	0	NaN	7921	4226	12146
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12158	34.366	NaN	1306.2	30	0	181.01	0.214	+			26022	LSLEGKPL	8	49	428.7615432391466	855.5085335450932	2	428.7608337402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSLEGKPL_	ENSG00000154783|ENST00000285046|FGD5;FGD5|p.D818*|1|0.19|ENSG00000154783|chr3:14821521-14821522|-/C|frameshift_variant;FGD5|p.T1238Pfs*9|1|0.25|ENSG00000154783|chr3:14922447-14922447|C/-|frameshift_variant	82.24051045832904	0.30490469762271794	5				NaN	NaN	0	NaN	7927	4229	12157
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12159	34.37	NaN	2301.8	30	0	213.95	0.106	+			46337	VEKLEQLI	8	58	486.29233590291824	970.5701188726365	2	486.2933654785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VEKLEQLI_	ENSG00000188906|ENST00000298910|LRRK2;LRRK2|p.K1328Rfs*8|1|0.21|ENSG00000188906|chr12:40308485-40308485|A/-|frameshift_variant;LRRK2|p.N2261Kfs*9|1|0.28|ENSG00000188906|chr12:40356119-40356120|-/A|frameshift_variant;LRRK2|p.R1639Gfs*15|1|0.59|ENSG00000188906|chr12:40320068-40320068|A/-|frameshift_variant;LRRK2|p.R1639Kfs*13|1|0.36|ENSG00000188906|chr12:40320067-40320068|-/A|frameshift_variant	62.107414245175825	0.4809183816468817	5				NaN	NaN	0	NaN	7928	4229	12157
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12160	34.372	NaN	1532.5	30	0	186.99	0.036				-1	FPALESMAAF	10	62	550.2589740586018	NaN	0	550.2587890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_FPALESM(Oxidation (M))AAF_	GREB1|p.T235M|1|0.5|ENSG00000196208|chr2:11578363-11578363|C/T|missense_variant	35.61828744233558	0.3832230071539346	5				NaN	NaN	0	NaN	7929	4229	12157
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12170	34.394	NaN	8388.2	30	0	2531.5	0.214	+			4647	ATLPPITVTSK	11	66	564.337004507664	1126.659456082128	2	564.3372802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATLPPITVTSK_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	59.93077597824379	0.32407304095777845	5				NaN	NaN	0	NaN	7936	4232	12169
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12171	34.397	NaN	5708	30	0	687.44	0.106	+			8372	EALSLAHTY	9	64	502.7560870980576	1003.4976212629152	2	502.7556457519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EALSLAHTY_	ENSG00000151779|ENST00000281513|NBAS;NBAS|p.L1365Ifs*4|1|0.13|ENSG00000151779|chr2:15352075-15352078|AAAG/-|frameshift_variant;NBAS|p.N1064Tfs*12|1|0.31|ENSG00000151779|chr2:15394293-15394293|T/-|frameshift_variant;NBAS|p.Y1476Mfs*33|1|0.28|ENSG00000151779|chr2:15328234-15328234|A/-|frameshift_variant;nc|ENSG00000151779|A2RRP1-2|NBAS	53.351449002276354	0.2690372970092375	5				NaN	NaN	0	NaN	7937	4232	12169
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12172	34.399	NaN	2492	30	0	130.41	0.106	+			51425	YTVSNTRPL	9	63	525.782079048411	1049.549605163622	2	525.782958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YTVSNTRPL_	ENST00000502513.1_1_4:944259-945532:+|nuORF	53.351449002276354	0.2690372970092375	5				NaN	NaN	0	NaN	7938	4232	12169
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12173	34.401	NaN	1633.3	30	0	245.78	0.106	+			23992	LEAAGIGKL	9	49	436.2662369312876	870.5179209293752	2	436.26605224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LEAAGIGKL_	ANKRD17|p.K886Sfs*4|1|0.39|ENSG00000132466|chr4:73139959-73139959|T/-|frameshift_variant;ANKRD17|p.L2249Yfs*84|1|0.34|ENSG00000132466|chr4:73090884-73090884|G/-|frameshift_variant;ENSG00000131503|ENST00000360839|ANKHD1;ENSG00000132466|ENST00000358602|ANKRD17;nc|ENSG00000131503|Q8IWZ3-2|ANKHD1;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;nc|ENSG00000131503|Q8IWZ3-5|ANKHD1;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1;nc|ENSG00000132466|O75179-2|ANKRD17;nc|ENSG00000132466|O75179-3|ANKRD17;nc|ENSG00000132466|O75179-4|ANKRD17;nc|ENSG00000132466|O75179-5|ANKRD17;nc|ENSG00000132466|O75179-6|ANKRD17;nc|ENSG00000132466|O75179-7|ANKRD17	79.71258880314673	0.09879134589249085	5				NaN	NaN	0	NaN	7939	4232	12169
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12174	34.403	NaN	2036.8	30	0	142.29	0.106	+			5245	ATVAVPLVGK	10	63	477.80267321998224	953.5907935067645	2	477.80230712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATVAVPLVGK_	ENSG00000136986|ENST00000259512|DERL1;nc|ENSG00000136986|Q9BUN8-2|DERL1	60.11826168202944	0.36476464221954025	5				NaN	NaN	0	NaN	7940	4232	12169
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12175	34.405	NaN	5389.5	30	0	2004.1	0.036	+			25034	LLHIIIEDN	9	68	540.3087792731255	1078.603005613051	2	540.8095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LLHIIIEDN_	NCAPG|p.D454E|1|0.23|ENSG00000109805|chr4:17823749-17823749|T/G|missense_variant	60.29395666154354	0.21116425950210296	5				NaN	NaN	0	NaN	7941	4232	12169
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12176	34.405	NaN	1446.7	30	0	177.11	0.139			+	-1	KISNIMEK	8	50	489.7666547539209	977.5187565746418	2	489.765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_KISNIM(Oxidation (M))EK_	REV__tr|U7STY1|U7STY1_FUSNUCobyrinatea,c-diamidesynthaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=cbiAPE=3SV=1	41.42661286455405	0.6474601000989023	5				NaN	NaN	0	NaN	7942	4232	12169
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12185	34.429	NaN	5194.4	30	0	798.29	0.214			+	-1	MLMNEGVTI	9	65	512.2461847399671	1022.4778165467343	2	512.2466430664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))LMNEGVTI_	REV__C2CD5|p.D676Mfs*40|1|0.33|ENSG00000111731|chr12:22474769-22474769|T/-|frameshift_variant;REV__ENSG00000111731|ENST00000446597|C2CD5;REV__ENST00000541310.5_1_12:22631189-22697084:-|nuORF;REV__nc|ENSG00000111731|Q86YS7-2|C2CD5;REV__nc|ENSG00000111731|Q86YS7-4|C2CD5;REV__nc|ENSG00000111731|Q86YS7-5|C2CD5;REV__nc|ENSG00000111731|Q86YS7|C2CD5	58.22992032128504	0.22837015374068087	5				NaN	NaN	0	NaN	7948	4235	12184
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12186	34.432	NaN	1931.5	30	0	173.97	0.106	+			38273	SQPIGISKY	9	56	496.77467923459636	991.5348055359927	2	496.7747802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SQPIGISKY_	tr|U7STE7|U7STE7_FUSNUYhcGPDDEXKnucleasedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01383PE=4SV=1	68.78682469695295	0.14603441672067394	5				NaN	NaN	0	NaN	7949	4235	12184
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12187	34.434	NaN	1994.3	30	0	111.52	0.035			+	-1	QDVEQSGCL	9	59	518.2237346555111	NaN	0	518.286376953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_QDVEQSGC(Carbamidomethyl (C))L_	REV__ENSG00000138411|ENST00000644978|HECW2;REV__HECW2|p.G1392Vfs*19|1|0.22|ENSG00000138411|chr2:196220913-196220913|C/-|frameshift_variant;REV__HECW2|p.R1017Gfs*19|1|0.33|ENSG00000138411|chr2:196278614-196278614|G/-|frameshift_variant;REV__HECW2|p.V922*|1|0.28|ENSG00000138411|chr2:196306539-196306539|G/-|frameshift_variant	32.81241826257853	0.3119040447479903	5				NaN	NaN	0	NaN	7950	4235	12184
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12195	34.452	NaN	2923.6	30	0	1016.7	0.215			+	50005	WARGRVAL	8	52	464.77689867846277	927.5392444237256	2	464.7767333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WARGRVAL_	REV__ENSG00000214946|ENST00000437605|TBC1D26;REV__nc|ENSG00000214946|Q86UD7-2|TBC1D26;REV__nc|ENSG00000214946|Q86UD7|TBC1D26	29.841539824830324	0.7289191502596711	5				NaN	NaN	0	NaN	7955	4238	12194
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12196	34.456	NaN	2562	30	0	151.65	0.106	+			23864	LDELKLAVA	9	64	486.29233590291824	970.5701188726365	2	486.2923583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LDELKLAVA_	ENSG00000070985|ENST00000696290|TRPM5;nc|ENSG00000070985|Q9NZQ8-2|TRPM5;nc|ENSG00000070985|Q9NZQ8-3|TRPM5	71.87747018426188	0.13267044672804276	5				NaN	NaN	0	NaN	7956	4238	12194
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12197	34.458	NaN	3288.4	30	0	573.35	0.035	+			7463	DFVINSCKI	9	63	519.7663712258429	1037.5181895184858	2	519.7673950195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DFVINSCKI_	ENSG00000197403|ENST00000641846|OR6N1	39.252832667884924	0.4290233611298554	5				NaN	NaN	0	NaN	7957	4238	12194
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12204	34.476	NaN	3460.1	30	0	357.02	0.214			+	-1	ICPSCLMAL	9	69	504.23945879580936	1006.4643646584187	2	504.2396240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_ICPSC(Carbamidomethyl (C))LMAL_	REV__ENSG00000103335|ENST00000301015|PIEZO1;REV__PIEZO1|p.A2395Pfs*117|1|0.37|ENSG00000103335|chr16:88716061-88716067|CCCCGCA/-|frameshift_variant;REV__PIEZO1|p.F1977Lfs*33|1|0.38|ENSG00000103335|chr16:88720403-88720403|A/-|frameshift_variant	55.50420428727701	0.2510918378945873	5				NaN	NaN	0	NaN	7961	4241	12203
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12205	34.48	NaN	1886.2	30	0	212.05	0.106	+			47781	VSHRTWPI	8	60	498.2739787888247	994.5334046444494	2	498.275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSHRTWPI_	ENST00000466758.5_1_3:182602545-182631653:+|nuORF	58.78195531508484	0.5138399468736706	5				NaN	NaN	0	NaN	7962	4241	12203
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12206	34.481	NaN	1029.1	30	0	231.89	0.106	+			43375	TGFLTSPAK	9	49	461.255459898557	920.496366863914	2	461.25616455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TGFLTSPAK_	ENST00000261530.11_1_14:76672664-76672892:+|nuORF	29.170058357718403	0.5306379469863586	5				NaN	NaN	0	NaN	7963	4241	12203
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12207	34.483	NaN	1024.8	30	0	51.235	0.037	+			17150	HTACVTALAYE	11	59	589.7779788784204	1177.5414048236407	2	589.7788696289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HTACVTALAYE_	ENSG00000206530|ENST00000393845|CFAP44;nc|ENSG00000206530|Q96MT7-1|CFAP44	32.81241826257853	0.645615689454792	5				NaN	NaN	0	NaN	7964	4241	12203
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12221	34.513	NaN	7301.2	30	0	1345.7	0.214	+			49536	VYANGQHLF	9	64	524.7638506508091	1047.5131483684181	2	524.76416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYANGQHLF_	ENSG00000171747|ENST00000307751|LGALS4	143.01937276914788	0.00906355689373299	5				NaN	NaN	0	NaN	7975	4244	12220
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12222	34.517	NaN	8443.5	30	0	912.13	0.106	+			28850	NPVEDKDAVAF	11	75	602.7956131489159	1203.5766733646317	2	602.7957153320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NPVEDKDAVAF_	CEACAM6|p.I217Mfs*11|3|0.07|ENSG00000086548|chr19:41761474-41761475|-/G|frameshift_variant;ENSG00000079385|ENST00000161559|CEACAM1;ENSG00000086548|ENST00000199764|CEACAM6;ENSG00000124469|ENST00000244336|CEACAM8;ENST00000344391.9_1_19:43023158-43032553:-|nuORF;ENST00000377806.7_1_19:43023094-43032607:-|nuORF;ENST00000403136.1_1_19:43025413-43032607:-|nuORF;nc|ENSG00000079385|P13688-10|CEACAM1;nc|ENSG00000079385|P13688-11|CEACAM1;nc|ENSG00000079385|P13688-2|CEACAM1;nc|ENSG00000079385|P13688-3|CEACAM1;nc|ENSG00000079385|P13688-4|CEACAM1;nc|ENSG00000079385|P13688-5|CEACAM1;nc|ENSG00000079385|P13688-6|CEACAM1;nc|ENSG00000079385|P13688-8|CEACAM1;nc|ENSG00000079385|P13688-9|CEACAM1	79.48907831485694	0.15663227531959176	5				NaN	NaN	0	NaN	7976	4244	12220
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12223	34.518	NaN	3160.7	30	0	421.81	0.106			+	51196	YPLLHALD	8	63	471.258089188473	940.501625443746	2	471.2579040527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YPLLHALD_	REV__ENSG00000167680|ENST00000586582|SEMA6B	44.53106598305862	0.628196326904373	5				NaN	NaN	0	NaN	7977	4244	12220
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12224	34.52	NaN	1840	30	0	133.73	0.106			+	10220	ETGTGLEVRG	10	66	509.7620851914417	1017.5096174496834	2	509.79974365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ETGTGLEVRG_	REV__ENSG00000225614|ENST00000565624|ZNF469;REV__ZNF469|p.A3754Rfs*17|1|0.31|ENSG00000225614|chr16:88438809-88438810|-/C|frameshift_variant;REV__ZNF469|p.D3286Tfs*124|1|0.31|ENSG00000225614|chr16:88437405-88437405|C/-|frameshift_variant;REV__ZNF469|p.I1874Yfs*24|1|0.39|ENSG00000225614|chr16:88433167-88433167|C/-|frameshift_variant;REV__ZNF469|p.Q2396Kfs*49|1|0.23|ENSG00000225614|chr16:88434735-88434735|C/-|frameshift_variant;REV__ZNF469|p.R3417Gfs*56|2|0.61|ENSG00000225614|chr16:88437795-88437795|G/-|frameshift_variant;REV__ZNF469|p.R3634Efs*58|4|0.52|ENSG00000225614|chr16:88438444-88438444|G/-|frameshift_variant;REV__ZNF469|p.R3818Gfs*95|1|0.46|ENSG00000225614|chr16:88439000-88439000|C/-|frameshift_variant	51.33545320467046	0.4446945571623749	5				NaN	NaN	0	NaN	7978	4244	12220
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12225	34.522	NaN	2186.9	30	0	284.05	0.106	+			5160	ATSVVSFVR	9	56	483.27387693157345	NaN	0	483.2742004394531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATSVVSFVR_	ENSG00000162817|ENST00000294889|C1orf115	41.42661286455405	0.26577678759562784	5				NaN	NaN	0	NaN	7979	4244	12220
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12226	34.524	NaN	866.61	30	0	85.086	0.039			+	33282	RGLERFAENID	11	47	660.3362426757812	NaN	0	660.3362426757812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RGLERFAENID_	REV__nc|ENSG00000071564|P15923-2|TCF3	14.693671053092006	0.456735970842152	5				NaN	NaN	0	NaN	7980	4244	12220
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12227	34.525	NaN	916.84	30	0	59.99	0.142	+			10098	ESLKKNEI	8	49	480.770552181913	NaN	0	480.7702331542969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ESLKKNEI_	ENSG00000177082|ENST00000434634|WDR73;ENST00000559015.5_1_15:85191580-85197505:-|nuORF;ENST00000559126.5_1_15:85186703-85196938:-|nuORF;ENST00000559994.5_1_15:85189295-85197510:-|nuORF;ENST00000560252.5_1_15:85191115-85197505:-|nuORF	66.42927471994793	1.7418937515398478	5				NaN	NaN	0	NaN	7981	4244	12220
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12239	34.552	NaN	3200.6	30	0	818.27	0.215				-1	AEKGAMLISG	10	63	496.75724035397974	991.4999277747595	2	498.2552185058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_AEKGAM(Oxidation (M))LISG_	ENST00000426119.5_2_2:27434356-27434643:-|nuORF	42.396135135203025	0.5270658956260207	5				NaN	NaN	0	NaN	7990	4247	12238
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12240	34.555	NaN	2239.8	30	0	221.62	0.106	+			47406	VPNKVIQCF	9	61	552.7971927485389	1103.5798325638777	2	552.7982177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_VPNKVIQC(Carbamidomethyl (C))F_	CLTC|p.A1374*|1|0.05|ENSG00000141367|chr17:59683464-59683465|-/TA|frameshift_variant;CLTC|p.D632Yfs*7|1|0.15|ENSG00000141367|chr17:59666589-59666590|-/TTACA|frameshift_variant;ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000141367|Q00610-2|CLTC	71.29570347882199	0.13518600952103718	5				NaN	NaN	0	NaN	7991	4247	12238
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12241	34.557	NaN	2261.7	30	0	519.29	0.106	+			51583	YYLTKTLY	8	62	532.7852505207682	1063.5559481083362	2	532.784912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YYLTKTLY_	ENSG00000105538|ENST00000222145|RASIP1	47.657333605630114	0.6087971902037268	5				NaN	NaN	0	NaN	7992	4247	12238
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12242	34.559	NaN	1270.8	30	0	132.83	0.106	+			30277	PTGDRIRSK	9	57	515.294189453125	NaN	0	515.294189453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PTGDRIRSK_	ENSG00000141644|ENST00000269468|MBD1;ENST00000589867.2_1_18:47803200-47806373:-|nuORF;MBD1|p.D143Wfs*29|1|0.25|ENSG00000141644|chr18:50276713-50276714|CT/-|frameshift_variant;nc|ENSG00000141644|Q9UIS9-10|MBD1;nc|ENSG00000141644|Q9UIS9-11|MBD1;nc|ENSG00000141644|Q9UIS9-12|MBD1;nc|ENSG00000141644|Q9UIS9-2|MBD1;nc|ENSG00000141644|Q9UIS9-4|MBD1;nc|ENSG00000141644|Q9UIS9-5|MBD1;nc|ENSG00000141644|Q9UIS9-6|MBD1;nc|ENSG00000141644|Q9UIS9-7|MBD1;nc|ENSG00000141644|Q9UIS9-8|MBD1;nc|ENSG00000141644|Q9UIS9-9|MBD1	44.377184641726394	0.24544280798894275	5				NaN	NaN	0	NaN	7993	4247	12238
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12243	34.561	NaN	1315.9	30	0	174.59	0.106				-1	MAFSIRLTEEE	11	55	684.3270283411247	NaN	0	684.3276977539062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))MAFSIRLTEEE_	tr|U7T5M2|U7T5M2_FUSNUAntitoxinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00013PE=4SV=1	21.68575002086885	0.456735970842152	5				NaN	NaN	0	NaN	7994	4247	12238
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12244	34.563	NaN	1423.1	30	0	148.88	0.035			+	30166	PSGAEARTLL	10	60	507.7826488521883	NaN	0	507.7818908691406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PSGAEARTLL_	REV__ENSG00000118707|ENST00000373872|TGIF2	35.15202426646627	0.38475398474706135	5				NaN	NaN	0	NaN	7995	4247	12238
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12256	34.588	NaN	23186	30	0	6683.1	0.214	+			4245	ATGDMSGLLK	10	72	496.75724035397974	991.4999277747595	2	496.7574768066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATGDMSGLLK_	ENSG00000127837|ENST00000248450|AAMP;ENST00000475678.5_1_2:219131145-219134809:-|nuORF;ENST00000489767.5_1_2:219130391-219134818:-|nuORF	148.6902309647307	0.008728094565931875	5				NaN	NaN	0	NaN	8004	4250	12255
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12257	34.592	NaN	2059.4	30	0	190.87	0.106	+			47246	VMQTKRMAL	9	66	539.3004664015298	1076.5863798698595	2	539.3016967773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VMQTKRMAL_	KLHL36|p.T288M|1|0.32|ENSG00000135686|chr16:84657670-84657670|C/T|missense_variant	40.05817265558897	0.419577045485086	5				NaN	NaN	0	NaN	8005	4250	12255
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12258	34.594	NaN	3961.5	30	0	1346.3	0.106			+	46245	VEELDLHVL	9	72	533.7918917454926	1065.5692305577852	2	533.7926025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VEELDLHVL_	REV__ENST00000577922.5_1_17:62500880-62502245:-|nuORF	73.97473282117947	0.12360187025703594	5				NaN	NaN	0	NaN	8006	4250	12255
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12259	34.596	NaN	2539.3	30	0	233.6	0.106	+			9443	EKLFQRCLM	9	66	592.3008719070964	1182.5871908809927	2	592.3017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_EKLFQRCLM(Oxidation (M))_	CSTF3|p.D250Efs*28|1|0.05|ENSG00000176102|chr11:33102253-33102254|-/GGTTACTAAAATTT|frameshift_variant;CSTF3|p.K439Nfs*33|4|0.35|ENSG00000176102|chr11:33096364-33096364|T/-|frameshift_variant;CSTF3|p.M122Nfs*6|1|0.25|ENSG00000176102|chr11:33106056-33106057|-/T|frameshift_variant;CSTF3|p.M205Nfs*3|1|0.32|ENSG00000176102|chr11:33103156-33103157|-/T|frameshift_variant;CSTF3|p.R275Efs*40|1|0.38|ENSG00000176102|chr11:33102180-33102180|T/-|frameshift_variant;ENSG00000176102|ENST00000323959|CSTF3	42.86426827375447	0.38666266728046506	5				NaN	NaN	0	NaN	8007	4250	12255
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12260	34.597	NaN	2639.9	30	0	312.48	0.106	+			45777	VAGAYVAGLI	10	63	467.2734403334236	NaN	0	467.2734069824219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VAGAYVAGLI_	ENSG00000186509|ENST00000335397|OR9Q1	54.76467175910256	0.2754795324328683	5				NaN	NaN	0	NaN	8008	4250	12255
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12261	34.599	NaN	987.37	30	0	127.86	0.034			+	24904	LKNLPELV	8	46	463.2894592285156	NaN	0	463.2894592285156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LKNLPELV_	REV__ENSG00000187688|ENST00000338560|TRPV2;REV__TRPV2|p.I444Sfs*23|3|0.39|ENSG00000187688|chr17:16427521-16427521|G/-|frameshift_variant	20.94693142431847	1.7418937515398478	5				NaN	NaN	0	NaN	8009	4250	12255
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12262	34.6	NaN	1840.8	30	0	226.7	0.141			+	46153	VDRVWTAQP	9	64	536.28369140625	NaN	0	536.28369140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VDRVWTAQP_	REV__ENSG00000143184|ENST00000367818|XCL1;REV__ENSG00000143185|ENST00000367819|XCL2	34.172542307311794	0.30503706118289736	5				NaN	NaN	0	NaN	8010	4250	12255
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12277	34.633	NaN	4623.5	30	0	627.69	0.214	+			50664	YEEELREL	8	70	540.7642069774553	1079.5138610217105	2	540.7640991210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YEEELREL_	ENSG00000175084|ENST00000373960|DES	75.04331003522576	0.3648751570195447	5				NaN	NaN	0	NaN	8022	4253	12276
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12278	34.637	NaN	1830.9	30	0	209.77	0.106	+			24368	LFQLTESGK	9	68	511.7793665085179	1021.5441800838358	2	511.7799072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LFQLTESGK_	ENST00000305699.15_1_16:89806300-89831390:-|nuORF	40.77816245573522	0.41113185337114944	5				NaN	NaN	0	NaN	8023	4253	12276
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12279	34.639	NaN	4535.9	30	0	489.65	0.106			+	11249	FILFLRRFWWR	11	63	547.3172655334844	1638.929967200653	3	547.6524047851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FILFLRRFWWR_	REV__ENST00000281830.3_1_2:223918801-223918864:+|nuORF	6.320883175729509	0.8408918793690873	5				NaN	NaN	0	NaN	8024	4253	12276
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12280	34.64	NaN	1233.3	30	0	127.24	0.034	+			13691	GPLKTDCLQ	9	48	487.7520456463446	NaN	0	487.7527160644531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GPLKTDCLQ_	ENSG00000138759|ENST00000512123|FRAS1;FRAS1|p.C3202Afs*11|1|0.32|ENSG00000138759|chr4:78508825-78508825|C/-|frameshift_variant;FRAS1|p.G3456Afs*3|1|0.28|ENSG00000138759|chr4:78515987-78515987|G/-|frameshift_variant;FRAS1|p.P3289Lfs*45|1|0.05|ENSG00000138759|chr4:78511358-78511359|-/T|frameshift_variant;FRAS1|p.V2385Sfs*37|1|0.28|ENSG00000138759|chr4:78466329-78466329|G/-|frameshift_variant;nc|ENSG00000138759|Q86XX4-5|FRAS1;nc|ENSG00000138759|Q86XX4|FRAS1	37.81151784470057	0.28666463014928195	5				NaN	NaN	0	NaN	8025	4253	12276
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12292	34.666	NaN	7280.2	30	0	735.51	0.214	+			12578	GEGVKLQVM	9	66	480.76256057723435	959.5105682212687	2	480.7624206542969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEGVKLQVM_	ENSG00000065427|ENST00000302445|KARS1;ENST00000451871.1_1_13:42499863-42500601:+|nuORF;ENST00000566560.5_1_16:75668010-75682538:-|nuORF;nc|ENSG00000065427|Q15046-2|KARS1	82.7504851949679	0.08565546331141553	5				NaN	NaN	0	NaN	8034	4256	12291
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12293	34.67	NaN	8146.2	30	0	3380.7	0.106	+			30490	QAFAQVFNK	9	78	526.7798164896208	1051.5450800460414	2	526.7805786132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QAFAQVFNK_	BZW1|p.N285Tfs*11|2|0.26|ENSG00000082153|chr2:200818782-200818782|A/-|frameshift_variant;BZW1|p.N286*|1|0.04|ENSG00000082153|chr2:200818790-200818791|-/T|frameshift_variant;BZW1|p.S325Rfs*19|1|0.04|ENSG00000082153|chr2:200819989-200819990|-/ACAATATAGAA|frameshift_variant;ENSG00000082153|ENST00000409600|BZW1;nc|ENSG00000082153|Q7L1Q6-2|BZW1;nc|ENSG00000082153|Q7L1Q6-3|BZW1;nc|ENSG00000082153|Q7L1Q6-4|BZW1	84.9155231211612	0.07920012719736333	5				NaN	NaN	0	NaN	8035	4256	12291
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12294	34.672	NaN	1922.1	30	0	305.95	0.106			+	-1	SLHLSCSNF	9	59	532.7448328496041	1063.4751127660081	2	532.7454833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SLHLSC(Carbamidomethyl (C))SNF_	REV__nc|ENSG00000109685|O96028-2|NSD2	34.172542307311794	0.4838870758800184	5				NaN	NaN	0	NaN	8036	4256	12291
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12295	34.673	NaN	2026.6	30	0	145.4	0.106			+	17233	HVLGFATNLL	10	64	542.8105136604955	1083.606474387791	2	542.8109741210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HVLGFATNLL_	REV__ENSG00000125459|ENST00000245564|MSTO1;REV__ENST00000483734.5_1_1:155580745-155584061:+|nuORF;REV__ENST00000494995.5_1_1:155580896-155583988:+|nuORF;REV__MSTO1|p.R279C|1|0.28|ENSG00000125459|chr1:155612439-155612439|C/T|missense_variant;REV__nc|ENSG00000125459|Q9BUK6-2|MSTO1;REV__nc|ENSG00000125459|Q9BUK6-3|MSTO1;REV__nc|ENSG00000125459|Q9BUK6-5|MSTO1;REV__nc|ENSG00000125459|Q9BUK6-7|MSTO1	29.550750289552195	0.6385079145554603	5				NaN	NaN	0	NaN	8037	4256	12291
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12296	34.675	NaN	2184.6	30	0	355.91	0.106	+			46313	VEKGFTPSL	9	63	489.2682794485286	976.5220059638572	2	489.2684326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VEKGFTPSL_	ENSG00000197142|ENST00000354655|ACSL5;ENST00000495539.5_1_10:114169305-114171667:+|nuORF;nc|ENSG00000197142|Q9ULC5-3|ACSL5;nc|ENSG00000197142|Q9ULC5-4|ACSL5	60.1669710687717	0.2122228167747824	5				NaN	NaN	0	NaN	8038	4256	12291
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12297	34.677	NaN	2658	30	0	164.49	0.036	+			11508	FPDKPITQY	9	68	554.7873026589565	1107.560052384713	2	555.2884521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FPDKPITQY_	ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656-2|DDOST;nc|ENSG00000244038|P39656-3|DDOST;nc|ENSG00000244038|P39656|DDOST	78.26377905018397	0.10505600812668463	5				NaN	NaN	0	NaN	8039	4256	12291
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12298	34.678	NaN	1237.4	30	0	244.91	0.141	+			9824	EPGYKGPHCQ	10	53	558.2491426597147	1114.4837323862293	2	557.8135375976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EPGYKGPHCQ_	MEGF11|p.R343H|1|0.21|ENSG00000157890|chr15:65964992-65964992|C/T|missense_variant	32.81241826257853	0.6118718159329168	5				NaN	NaN	0	NaN	8040	4256	12291
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12309	34.703	NaN	2974.9	30	0	341.76	0.214			+	50133	WIHFGLVT	8	61	486.7679435381361	971.5213341430722	2	486.7681884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WIHFGLVT_	REV__ENST00000519416.5_2_8:38706173-38706524:+|nuORF	39.021493756699265	0.6623843612266921	5				NaN	NaN	0	NaN	8048	4259	12308
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12310	34.707	NaN	1630.5	30	0	201.49	0.106			+	6832	CIARWLAL	8	50	473.27151314714064	944.5284733610813	2	473.2715148925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_CIARWLAL_	REV__ENST00000395491.6_1_17:21217545-21218022:+|nuORF	44.53106598305862	0.628196326904373	5				NaN	NaN	0	NaN	8049	4259	12308
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12311	34.709	NaN	2555	30	0	280.59	0.106	+			2422	APEEHPVLL	9	60	502.7741319613183	1003.5337109894366	2	502.7740173339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_APEEHPVLL_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF	56.72105179125745	0.24094814563026265	5				NaN	NaN	0	NaN	8050	4259	12308
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12312	34.71	NaN	3197.2	30	0	749.46	0.106	+			14576	GTFSKLFGK	9	61	492.77914081965304	983.5437287061061	2	492.7789306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTFSKLFGK_	ENSG00000188112|ENST00000341865|C6orf132;nc|nan|Q5T0Z8-2|C6orf132;nc|nan|Q5T0Z8-4|C6orf132	65.46538089061403	0.16805504838372562	5				NaN	NaN	0	NaN	8051	4259	12308
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12313	34.712	NaN	1643.5	30	0	248.55	0.036			+	-1	KGAGQLGALMI	11	62	537.8008791337819	1073.5872053343637	2	537.7999267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_KGAGQLGALM(Oxidation (M))I_	REV__tr|U7T8Q8|U7T8Q8_FUSNUSignalrecognitionparticleproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=ffhPE=3SV=1	39.252832667884924	0.5681665794958463	5				NaN	NaN	0	NaN	8052	4259	12308
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12325	34.738	NaN	5974.1	30	0	1454.3	0.214	+			4648	ATLPPITVTSK	11	65	564.337004507664	1126.659456082128	2	564.33740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATLPPITVTSK_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	36.31764250033197	0.6083289427130232	5				NaN	NaN	0	NaN	8061	4262	12324
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12326	34.741	NaN	2141.8	30	0	583.23	0.106			+	-1	NIALCSCSIV	10	60	540.2677503771237	NaN	0	540.267333984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_NIALCSC(Carbamidomethyl (C))SIV_	REV__ENSG00000135452|ENST00000257910|TSPAN31;REV__ENST00000546993.5_1_12:58138937-58140584:+|nuORF;REV__ENST00000550528.5_1_12:58133675-58140075:+|nuORF	35.61828744233558	0.3832230071539346	5				NaN	NaN	0	NaN	8062	4262	12324
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12327	34.743	NaN	2394	30	0	716.28	0.106			+	44092	TPTPHPPRYQ	10	51	597.3059557439326	1192.597358554665	2	597.8074340820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TPTPHPPRYQ_	REV__ENST00000475688.1_1_3:50379695-50380193:-|nuORF	27.882242232435846	0.6521336255503853	5				NaN	NaN	0	NaN	8063	4262	12324
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12328	34.745	NaN	1500.1	30	0	127.45	0.035	+			8209	EADPEKKY	8	61	490.2398669623026	NaN	0	490.2396240234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EADPEKKY_	ENSG00000111271|ENST00000313698|ACAD10;ENST00000413681.7_1_12:112130513-112186840:+|nuORF;ENST00000508303.5_1_12:112159488-112186840:+|nuORF;nc|ENSG00000111271|Q6JQN1-2|ACAD10;nc|ENSG00000111271|Q6JQN1-3|ACAD10;nc|ENSG00000111271|Q6JQN1-5|ACAD10	55.50420428727701	1.7418937515398478	5				NaN	NaN	0	NaN	8064	4262	12324
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12338	34.767	NaN	2040.2	30	0	443.6	0.214			+	-1	CLAARKDCE	9	67	561.7566378846681	1121.498722836136	2	561.7568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))LAARKDC(Carbamidomethyl (C))E_	REV__ENSG00000188784|ENST00000375116|PLA2G2E	40.77816245573522	0.41113185337114944	5				NaN	NaN	0	NaN	8071	4265	12337
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12339	34.771	NaN	1823.3	30	0	139.11	0.106	+			10753	FAENGTVQY	9	60	514.73833853087	NaN	0	514.7380981445312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FAENGTVQY_	ENSG00000100417|ENST00000216259|PMM1;ENST00000472620.5_1_22:41980283-41985061:-|nuORF;ENST00000478337.1_1_22:41980122-41985809:-|nuORF;ENST00000482178.5_1_22:41980283-41980722:-|nuORF;ENST00000485648.5_1_22:41980283-41985809:-|nuORF;PMM1|p.E103Sfs*6|1|0.05|ENSG00000100417|chr22:41584348-41584348|C/-|frameshift_variant	62.107414245175825	0.1403307765918332	5				NaN	NaN	0	NaN	8072	4265	12337
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12340	34.772	NaN	1436.5	30	0	178.41	0.106			+	18080	IKKPADKN	8	46	457.2766808151735	912.538808697147	2	457.2769470214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IKKPADKN_	REV__ENSG00000188282|ENST00000697321|RUFY4;REV__RUFY4|p.E426Rfs*11|1|0.38|ENSG00000188282|chr2:218076453-218076453|T/-|frameshift_variant	55.50420428727701	0.5462892107279674	5				NaN	NaN	0	NaN	8073	4265	12337
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12341	34.774	NaN	1888.9	30	0	169.76	0.035			+	2088	ALEPTPAAVAP	11	63	518.7872314453125	NaN	0	518.7872314453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ALEPTPAAVAP_	REV__ITGA7|p.L22Pfs*81|1|0.5|ENSG00000135424|chr12:55707618-55707619|-/G|frameshift_variant	27.882242232435846	0.44115667141176046	5				NaN	NaN	0	NaN	8074	4265	12337
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12345	34.788	NaN	2109.8	30	0	150.89	0.142			+	2138	ALKLGLAAAE	10	57	478.7921587407782	955.5697645483564	2	478.7925109863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ALKLGLAAAE_	REV__ENSG00000170837|ENST00000304411|GPR27	66.42927471994793	0.3073667423445326	5				NaN	NaN	0	NaN	8075	4268	12344
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12353	34.81	NaN	2498.1	30	0	402.42	0.143	+			42383	TAIRALETY	9	62	519.2851412378293	1036.5557295424585	2	519.286376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAIRALETY_	ELL2|p.H478Afs*4|1|0.2|ENSG00000118985|chr5:95898334-95898335|-/T|frameshift_variant;ELL2|p.K468Nfs*8|1|0.32|ENSG00000118985|chr5:95898361-95898361|T/-|frameshift_variant;ENSG00000118985|ENST00000237853|ELL2;ENST00000506628.1_1_5:95242411-95297425:-|nuORF;nc|ENSG00000118985|O00472-2|ELL2	61.76455937419982	0.19890525308472518	5				NaN	NaN	0	NaN	8080	4271	12352
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12364	34.836	NaN	5861.4	30	0	741.42	0.214			+	13476	GLLGATAIIK	10	68	478.8107501494654	955.6069473657308	2	478.8103332519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GLLGATAIIK_	REV__tr|U7ST96|U7ST96_FUSNUHeavymetaltranslocatingP-typeATPaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01272PE=3SV=1	82.7504851949679	0.1731497355276012	5				NaN	NaN	0	NaN	8088	4274	12363
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12365	34.84	NaN	1614.5	30	0	102.71	0.035	+			24785	LIGGQAWDW	9	63	523.2580605447037	NaN	0	523.2576293945312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LIGGQAWDW_	ENSG00000198420|ENST00000479870|TCAF1;nc|ENSG00000198420|Q9Y4C2-2|TCAF1	50.0245360154114	0.20652386741182333	5				NaN	NaN	0	NaN	8089	4274	12363
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12375	34.862	NaN	2708.5	30	0	459.68	0.214	+			48318	VTFKEESK	8	54	484.2588986768176	966.5032444204352	2	484.25848388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTFKEESK_	ENSG00000174197|ENST00000703841|MGA;ENST00000566288.1_1_15:42040980-42042834:+|nuORF;MGA|p.D2578Rfs*45|1|0.32|ENSG00000174197|chr15:41762342-41762343|-/A|frameshift_variant;MGA|p.S2228Kfs*5|1|0.33|ENSG00000174197|chr15:41750284-41750285|-/A|frameshift_variant;nc|ENSG00000174197|Q8IWI9-3|MGA;nc|ENSG00000174197|Q8IWI9|MGA	52.936696900407355	0.5717071646657654	5				NaN	NaN	0	NaN	8096	4277	12374
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12376	34.865	NaN	3458.1	30	0	403.56	0.106			+	9156	EGNPVAINL	9	52	463.75101521794755	925.4874775026951	2	464.2527770996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EGNPVAINL_	REV__ENSG00000100271|ENST00000266254|TTLL1;REV__nc|ENSG00000100271|O95922-4|TTLL1	53.351449002276354	0.2690372970092375	5				NaN	NaN	0	NaN	8097	4277	12374
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12377	34.867	NaN	3084.9	30	0	1964.9	0.031				-1	 	0	41	379.2095710999221	756.4045892666442	2	379.2095947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8098	4277	12374
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12384	34.883	NaN	1616.1	30	0	146.54	0.143				-1	 	0	51	521.2495196701982	520.2422432035982	1	521.2503662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8102	4280	12383
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12393	34.907	NaN	6681.4	30	0	1641.9	0.214			+	13082	GFPIPKVGL	9	60	464.28482675501664	926.5551005768333	2	464.284423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GFPIPKVGL_	REV__ENSG00000169208|ENST00000641040|OR10G3	79.9392285194092	0.09781135437301468	5				NaN	NaN	0	NaN	8108	4283	12392
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12394	34.911	NaN	2036.8	30	0	169.68	0.036	+			37801	SMEGRAPQCL	10	61	546.2534850610591	1090.4924171889181	2	546.7561645507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SMEGRAPQCL_	ENST00000379446.9_1_6:11232788-11232833:-|nuORF	29.170058357718403	0.6416167986984785	5				NaN	NaN	0	NaN	8109	4283	12392
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12405	34.936	NaN	1854.9	30	0	351.05	0.214				-1	NMIDAATLK	9	56	496.75724035397974	991.4999277747595	2	496.7572021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_NM(Oxidation (M))IDAATLK_	ENSG00000171557|ENST00000336098|FGG;nc|ENSG00000171557|P02679-2|FGG	51.19269402634007	0.2889735674168909	5				NaN	NaN	0	NaN	8117	4286	12404
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12406	34.94	NaN	5528.6	30	0	990.07	0.106	+			31675	QNIKEQLLI	9	65	549.8293437673746	1097.644134601549	2	549.8298950195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QNIKEQLLI_	tr|U7SYR9|U7SYR9_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00893PE=4SV=1	99.37495909608758	0.03983967222258828	5				NaN	NaN	0	NaN	8118	4286	12404
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12407	34.942	NaN	1017.9	30	0	618.15	0.106				-1	 	0	21	327.20263313074514	652.3907133282903	2	327.2025146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8119	4286	12404
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12408	34.943	NaN	1204.6	30	0	217.73	0.106	+			26272	LSTLARSPD	9	45	480.2616129944101	NaN	0	480.26129150390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSTLARSPD_	ENST00000244745.3_2_6:21594329-21594497:+|nuORF	47.657333605630114	0.2228375344433429	5				NaN	NaN	0	NaN	8120	4286	12404
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12409	34.945	NaN	1938	30	0	178.43	0.106	+			42360	TAIEKVVQM	9	59	509.78387713388565	1017.5532013345713	2	509.7845458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TAIEKVVQM_	ENSG00000142627|ENST00000358432|EPHA2	51.19269402634007	0.2889735674168909	5				NaN	NaN	0	NaN	8121	4286	12404
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12410	34.947	NaN	4814.7	30	0	353.97	0.036	+			45552	TYLEKAIKI	9	66	539.8290276588067	1077.6435023844133	2	540.3314208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TYLEKAIKI_	ENSG00000187555|ENST00000344836|USP7;ENST00000565455.5_1_16:8987857-9023250:-|nuORF;nc|ENSG00000187555|Q93009-3|USP7;USP7|p.R1090H|1|0.23|ENSG00000187555|chr16:8894038-8894038|C/T|missense_variant	106.88024417677582	0.032181361622142884	5				NaN	NaN	0	NaN	8122	4286	12404
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12422	34.973	NaN	4352	30	0	489.34	0.214	+			17921	IGKCKSLSV	9	64	467.7741253328266	NaN	0	467.7729797363281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IGKCKSLSV_	ENST00000515235.6_1_5:118788237-118827866:+|nuORF	42.396135135203025	0.2590952873412954	5				NaN	NaN	0	NaN	8131	4289	12421
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12423	34.976	NaN	2677.7	30	0	262.43	0.106	+			25308	LPAPPTQNM	9	63	484.7466535011092	967.4787540690185	2	484.7467956542969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LPAPPTQNM_	ENSG00000141380|ENST00000415083|SS18;ENSG00000184402|ENST00000331758|SS18L1;nc|ENSG00000141380|Q15532-2|SS18;nc|ENSG00000184402|O75177-2|SS18L1;nc|ENSG00000184402|O75177-5|SS18L1;SS18|p.G113Vfs*11|1|0.35|ENSG00000141380|chr18:26057636-26057636|C/-|frameshift_variant	64.20726635412375	0.17854274437659667	5				NaN	NaN	0	NaN	8132	4289	12421
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12424	34.978	NaN	1514.9	30	0	184.8	0.106	+			16362	HENDTIYSL	9	54	546.2534850610591	1090.4924171889181	2	546.2542724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HENDTIYSL_	ENSG00000162365|ENST00000371891|CYP4A22;nc|ENSG00000162365|Q5TCH4-2|CYP4A22	24.519189625965996	0.574102787014149	5				NaN	NaN	0	NaN	8133	4289	12421
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12425	34.98	NaN	1207.6	30	0	197.14	0.106			+	26544	LTSAAGGLLL	10	48	458.2789730733794	914.5433932135588	2	458.2792663574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LTSAAGGLLL_	REV__ENSG00000105135|ENST00000263383|ILVBL;REV__ENST00000533086.5_1_19:15228578-15234387:-|nuORF	42.396135135203025	0.5270658956260207	5				NaN	NaN	0	NaN	8134	4289	12421
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12426	34.982	NaN	1094.1	30	0	46.525	0.034	+			50205	WLVGPFAPG	9	59	472.2565456043356	NaN	0	472.2562255859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_WLVGPFAPG_	ENSG00000105355|ENST00000221957|PLIN3;nc|ENSG00000105355|O60664-2|PLIN3;nc|ENSG00000105355|O60664-3|PLIN3;nc|ENSG00000105355|O60664-4|PLIN3;PLIN3|p.T415M|1|0.4|ENSG00000105355|chr19:4839253-4839253|G/A|missense_variant	39.021493756699265	0.2805557132942146	5				NaN	NaN	0	NaN	8135	4289	12421
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12437	35.007	NaN	3972.1	30	0	606.14	0.214	+			11174	FGQLGREL	8	56	460.2534067455933	918.4922605579866	2	460.2529602050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FGQLGREL_	ENSG00000277150|ENST00000622749|F8A3	87.69643885390035	0.28444366722805053	5				NaN	NaN	0	NaN	8143	4292	12436
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12438	35.011	NaN	2467.9	30	0	271.42	0.106	+			51230	YPVEIHEY	8	65	525.2508155190176	1048.487078104835	2	525.2504272460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YPVEIHEY_	C1D|p.W68Gfs*16|1|0.11|ENSG00000197223|chr2:68046347-68046347|A/-|frameshift_variant;ENSG00000197223|ENST00000410067|C1D;ENST00000485709.1_1_2:68273401-68290109:-|nuORF	79.9392285194092	0.32408006123154964	5				NaN	NaN	0	NaN	8144	4292	12436
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12439	35.012	NaN	897.39	30	0	74.873	0.106	+			31106	QFRLAAVGPT	10	53	530.2998657226562	NaN	0	530.2998657226562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QFRLAAVGPT_	ENST00000378402.9_1_8:110535537-110539057:+|nuORF	32.81241826257853	0.3924360933802784	5				NaN	NaN	0	NaN	8145	4292	12436
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12440	35.014	NaN	832.29	30	0	70.579	0.106			+	10848	FASSQPIKA	9	51	474.76043701171875	NaN	0	474.76043701171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FASSQPIKA_	REV__ENSG00000188771|ENST00000338832|PLET1	53.351449002276354	0.18359631779194618	5				NaN	NaN	0	NaN	8146	4292	12436
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12441	35.016	NaN	1951	30	0	144.07	0.106	+			19649	KDLDVALPI	9	59	492.29252340385295	982.5704938745059	2	492.2928161621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KDLDVALPI_	ENSG00000203705|ENST00000366974|TATDN3;nc|ENSG00000203705|Q17R31-2|TATDN3;nc|ENSG00000203705|Q17R31-3|TATDN3;nc|ENSG00000203705|Q17R31-5|TATDN3;TATDN3|p.E96D|1|0.05|ENSG00000203705|chr1:212802730-212802730|G/T|missense_variant	32.81241826257853	0.4965981579233955	5				NaN	NaN	0	NaN	8147	4292	12436
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12442	35.018	NaN	2352.8	30	0	166.26	0.034	+			12443	GEAVELRSL	9	62	487.269951926599	972.525350919998	2	487.2683410644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GEAVELRSL_	ENSG00000157870|ENST00000419916|PRXL2B;nc|ENSG00000157870|Q8TBF2-2|PRXL2B;nc|ENSG00000157870|Q8TBF2-3|PRXL2B;nc|ENSG00000157870|Q8TBF2-4|PRXL2B;nc|ENSG00000157870|Q8TBF2-6|PRXL2B;nc|ENSG00000157870|Q8TBF2-7|PRXL2B	47.95952297671804	0.32689736945648856	5				NaN	NaN	0	NaN	8148	4292	12436
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12443	35.018	NaN	1345.5	30	0	54.481	0.141			+	-1	DTQVGTLYM	9	59	522.2410278320312	NaN	0	522.2410278320312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_DTQVGTLYM(Oxidation (M))_	REV__ENSG00000164171|ENST00000296585|ITGA2	34.172542307311794	0.30503706118289736	5				NaN	NaN	0	NaN	8149	4292	12436
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12454	35.045	NaN	6652	30	0	851.24	0.214	+			45706	VAALAEAQDI	10	68	500.76898082529135	999.5234087173827	2	500.76934814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VAALAEAQDI_	DNAH9|p.G3533Dfs*40|1|0.29|ENSG00000007174|chr17:11880190-11880190|A/-|frameshift_variant;DNAH9|p.I3688Tfs*40|1|0.11|ENSG00000007174|chr17:11886915-11886924|ATCATGAACG/-|frameshift_variant;DNAH9|p.K1203Rfs*6|1|0.24|ENSG00000007174|chr17:11680749-11680749|A/-|frameshift_variant;DNAH9|p.N816Tfs*3|1|0.34|ENSG00000007174|chr17:11652851-11652851|A/-|frameshift_variant;DNAH9|p.P2650Hfs*2|2|0.29|ENSG00000007174|chr17:11784422-11784422|C/-|frameshift_variant;ENSG00000007174|ENST00000262442|DNAH9;nc|ENSG00000007174|Q9NYC9-2|DNAH9	52.936696900407355	0.4300801048568001	5				NaN	NaN	0	NaN	8157	4295	12453
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12455	35.049	NaN	3040.9	30	0	262.81	0.106	+			11509	FPDKPITQY	9	67	554.7873026589565	1107.560052384713	2	554.7883911132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FPDKPITQY_	ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656-2|DDOST;nc|ENSG00000244038|P39656-3|DDOST;nc|ENSG00000244038|P39656|DDOST	70.8162118820467	0.13725933411854815	5				NaN	NaN	0	NaN	8158	4295	12453
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12456	35.051	NaN	2374.6	30	0	157.37	0.035	+			924	AEIEQYRL	8	63	511.26961654063666	1020.5246801480733	2	511.2699890136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEIEQYRL_	ENSG00000136888|ENST00000374050|ATP6V1G1	67.49366992349736	0.4277823096851425	5				NaN	NaN	0	NaN	8159	4295	12453
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12465	35.071	NaN	2074.6	30	0	472.43	0.214			+	21611	KPNDVIKL	8	52	463.78675969761076	NaN	0	463.78753662109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KPNDVIKL_	REV__ENSG00000168795|ENST00000307750|ZBTB5;REV__ZBTB5|p.T398Wfs*7|1|0.07|ENSG00000168795|chr9:37441360-37441361|-/TGAGTCCA|frameshift_variant	42.396135135203025	1.7418937515398478	5				NaN	NaN	0	NaN	8165	4298	12464
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12466	35.075	NaN	1716.9	30	0	887.03	0.106	+			35357	SAPLGKMSL	9	44	452.2519167187439	902.4892805042879	2	452.252197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAPLGKMSL_	ENSG00000122203|ENST00000298569|KIAA1191;ENST00000506668.5_1_5:175780428-175786529:-|nuORF;KIAA1191|p.K274Qfs*18|1|0.61|ENSG00000122203|chr5:176347698-176347699|-/G|frameshift_variant	47.657333605630114	0.33044192980041115	5				NaN	NaN	0	NaN	8166	4298	12464
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12467	35.076	NaN	1404.5	30	0	151.38	0.034	+			15637	GVLGPIINK	9	50	455.7890312696261	909.5635096060522	2	456.2903747558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GVLGPIINK_	ENSG00000105808|ENST00000262940|RASA4;ENSG00000170667|ENST00000465829|RASA4B;ENST00000523568.1_7:102228019-102246337:-|nuORF;nc|ENSG00000105808|O43374-2|RASA4	65.80317337860623	0.1652391959156183	5				NaN	NaN	0	NaN	8167	4298	12464
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12478	35.1	NaN	8831.5	30	0	943.92	0.214	+			28286	NEASVLHNL	9	73	498.75886647854844	995.5031800238969	2	498.7586669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NEASVLHNL_	ENSG00000078814|ENST00000262873|MYH7B;ENSG00000100345|ENST00000216181|MYH9;ENSG00000105357|ENST00000642316|MYH14;ENSG00000133026|ENST00000360416|MYH10;ENSG00000133392|ENST00000300036|MYH11;MYH10|p.A411Pfs*11|1|0.15|ENSG00000133026|chr17:8546562-8546562|T/-|frameshift_variant;MYH14|p.G549Wfs*8|1|0.23|ENSG00000105357|chr19:50250519-50250520|-/C|frameshift_variant;MYH14|p.L1950Sfs*14|1|0.34|ENSG00000105357|chr19:50309646-50309646|C/-|frameshift_variant;MYH14|p.M997*|1|0.19|ENSG00000105357|chr19:50271483-50271483|A/-|frameshift_variant;MYH14|p.P548Lfs*25|2|0.32|ENSG00000105357|chr19:50250520-50250520|C/-|frameshift_variant;MYH14|p.R929Gfs*44|1|0.38|ENSG00000105357|chr19:50268237-50268237|G/-|frameshift_variant;MYH9|p.C91Y|1|0.25|ENSG00000100345|chr22:36348965-36348965|C/T|missense_variant;MYH9|p.I784*|1|0.07|ENSG00000100345|chr22:36304036-36304036|G/-|frameshift_variant;nc|ENSG00000078814|A7E2Y1-2|MYH7B;nc|ENSG00000078814|A7E2Y1|MYH7B;nc|ENSG00000105357|Q7Z406-4|MYH14;nc|ENSG00000105357|Q7Z406-5|MYH14;nc|ENSG00000105357|Q7Z406-6|MYH14;nc|ENSG00000105357|Q7Z406|MYH14;nc|ENSG00000133026|P35580-2|MYH10;nc|ENSG00000133026|P35580-3|MYH10;nc|ENSG00000133026|P35580-5|MYH10;nc|ENSG00000133026|P35580|MYH10;nc|ENSG00000133392|P35749-2|MYH11;nc|ENSG00000133392|P35749-3|MYH11;nc|ENSG00000133392|P35749-4|MYH11	141.52041321563706	0.009766778904176347	5				NaN	NaN	0	NaN	8175	4301	12477
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12479	35.104	NaN	3247.1	30	0	836.81	0.106	+			4649	ATLPPITVTSK	11	58	564.337004507664	1126.659456082128	2	564.337158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATLPPITVTSK_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	40.05817265558897	0.5571470695993369	5				NaN	NaN	0	NaN	8176	4301	12477
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12480	35.106	NaN	2366.8	30	0	267.77	0.106			+	28069	NADILFER	8	67	489.2563217043046	NaN	0	489.25579833984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NADILFER_	REV__tr|U7SFA7|U7SFA7_FUSNUPepSYdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02318PE=4SV=1	42.86426827375447	1.7418937515398478	5				NaN	NaN	0	NaN	8177	4301	12477
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12481	35.107	NaN	1641.6	30	0	291.77	0.106			+	48382	VTHIVYKAP	9	61	514.2998216039958	1026.5850902747916	2	514.2993774414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTHIVYKAP_	REV__ENSG00000133315|ENST00000255681|MACROD1;REV__ENSG00000172264|ENST00000684519|MACROD2;REV__nc|ENSG00000172264|A1Z1Q3|MACROD2	27.882242232435846	0.5426732730940306	5				NaN	NaN	0	NaN	8178	4301	12477
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12482	35.109	NaN	1529	30	0	309.28	0.033			+	43838	TLSVAATVL	9	47	437.76617122568854	873.5177895181771	2	437.7662658691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TLSVAATVL_	REV__ENSG00000163319|ENST00000295491|MRPS18C;REV__ENST00000455300.1_1_X:53852417-53852804:+|nuORF;REV__ENST00000512375.1_1_4:84377137-84378237:+|nuORF	37.15910966729921	0.4535818937225704	5				NaN	NaN	0	NaN	8179	4301	12477
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12494	35.135	NaN	6666.1	30	0	445.87	0.214	+			4670	ATLQYIVGR	9	74	510.7955010955389	1019.5764492578778	2	510.79595947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATLQYIVGR_	ENSG00000085377|ENST00000652536|PREP;PREP|p.L670Cfs*20|1|0.16|ENSG00000085377|chr6:105278269-105278269|G/-|frameshift_variant	129.42129120953632	0.01549634589885217	5				NaN	NaN	0	NaN	8188	4304	12493
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12495	35.138	NaN	3617.9	30	0	289.32	0.106	+			2518	APVGGHILSY	10	69	507.27381985635657	1012.5330867795132	2	507.2742614746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_APVGGHILSY_	ENSG00000197879|ENST00000648651|MYO1C;nc|ENSG00000197879|O00159-2|MYO1C;nc|ENSG00000197879|O00159-3|MYO1C	60.97194046774394	0.3570005369683776	5				NaN	NaN	0	NaN	8189	4304	12493
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12496	35.14	NaN	6340.4	30	0	1570.3	0.106	+			1068	AEKVEIATL	9	73	487.28176932947315	972.5489857257463	2	487.28155517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEKVEIATL_	ENSG00000041357|ENST00000044462|PSMA4;nc|ENSG00000041357|P25789-2|PSMA4	109.47833844074708	0.029530294723441826	5				NaN	NaN	0	NaN	8190	4304	12493
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12497	35.142	NaN	5752.6	30	0	845.67	0.106	+			8063	DVKEAASVY	9	68	491.2479326635007	980.4813123938014	2	491.24755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DVKEAASVY_	ENST00000490962.1_1_3:72926686-72926866:-|nuORF	51.33545320467046	0.2872990594074956	5				NaN	NaN	0	NaN	8191	4304	12493
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12498	35.144	NaN	5503.6	30	0	603.16	0.106	+			48024	VSRKDLLE	8	65	480.27944607057435	958.5443392079487	2	480.2790832519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSRKDLLE_	tr|U7SYZ9|U7SYZ9_FUSNUEthanolamineutilizationcobalaminadenosyltransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00827PE=4SV=1	96.19043198914106	0.25873003980794995	5				NaN	NaN	0	NaN	8192	4304	12493
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12499	35.146	NaN	1964.9	30	0	163.88	0.034	+			714	AEASMISKL	9	58	475.2545851740893	948.4946174149786	2	475.2543640136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEASMISKL_	ENSG00000055130|ENST00000325222|CUL1	54.722347961057174	0.257609425301511	5				NaN	NaN	0	NaN	8193	4304	12493
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12500	35.146	NaN	2513.4	30	0	282.05	0.14				-1	CKGGKGMGGW	10	66	519.2376655773132	1036.4607782214264	2	519.7393798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_C(Carbamidomethyl (C))KGGKGMGGW_	chrX:2909979-2910794|103|13.04|0.52|4.64|-|2|ARSD,None|1	37.15910966729921	0.575322462179216	5				NaN	NaN	0	NaN	8194	4304	12493
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12513	35.175	NaN	10622	30	0	1886.4	0.214			+	20242	KELTLVKQ	8	62	479.80035346988205	957.5861540065641	2	479.79962158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KELTLVKQ_	REV__ENST00000552049.5_1_12:52404317-52404936:+|nuORF	116.90359126533652	0.23898233959989007	5				NaN	NaN	0	NaN	8204	4307	12512
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12514	35.179	NaN	1233.5	30	0	194.06	0.106				-1	CGAPGRLA	8	37	401.2047265625991	800.3949001919982	2	401.204345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_C(Carbamidomethyl (C))GAPGRLA_	ENST00000525829.1_1_8:12219536-12219971:+|nuORF	28.2542754592877	0.7411748056684583	5				NaN	NaN	0	NaN	8205	4307	12512
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12515	35.181	NaN	1315.7	30	0	127.55	0.106				-1	YGDVPPGPAF	10	59	531.2490821046428	NaN	0	531.2495727539062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))YGDVPPGPAF_	ENSG00000169047|ENST00000305123|IRS1;IRS1|p.H598Tfs*38|3|0.31|ENSG00000169047|chr2:226796948-226796948|C/-|frameshift_variant;IRS1|p.K161N|1|0.36|ENSG00000169047|chr2:226798256-226798256|T/G|missense_variant;IRS1|p.P368Rfs*95|1|0.18|ENSG00000169047|chr2:226797636-226797636|G/-|frameshift_variant	37.15910966729921	0.3781637092648983	5				NaN	NaN	0	NaN	8206	4307	12512
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12516	35.183	NaN	1394.3	30	0	72.893	0.106				-1	 	0	67	651.0217614904116	NaN	0	650.6867065429688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8207	4307	12512
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12517	35.185	NaN	2132.8	30	0	169.63	0.036	+			41098	SVINPGAIYR	10	67	545.306602570895	1088.59865220859	2	545.7396240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVINPGAIYR_	ENSG00000115232|ENST00000397033|ITGA4;ENST00000465522.5_1_2:182322141-182350724:+|nuORF;ENST00000476089.1_1_2:182321937-182323202:+|nuORF;ENST00000484404.1_1_2:182322441-182339919:+|nuORF;ITGA4|p.T615Nfs*11|1|0.22|ENSG00000115232|chr2:181509798-181509799|-/A|frameshift_variant;nc|ENSG00000115232|P13612-2|ITGA4	62.107414245175825	0.3466735403679669	5				NaN	NaN	0	NaN	8208	4307	12512
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12527	35.206	NaN	2131.9	30	0	206.58	0.214	+			4107	ATDVIVEI	8	50	430.24299662703305	858.4714403208661	2	430.2426452636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATDVIVEI_	tr|U7SSM4|U7SSM4_FUSNUPeptidaseTOS=FusobacteriumnucleatumCTI-5OX=1316586GN=pepTPE=3SV=1	52.29916861842294	0.578018602984656	5				NaN	NaN	0	NaN	8215	4310	12526
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12528	35.21	NaN	2856.7	30	0	279.81	0.106	+			28164	NAMNMQETY	9	66	551.2205948531614	1100.4266367731227	2	551.2219848632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NAMNMQETY_	ENSG00000114520|ENST00000251775|SNX4;ENST00000473417.5_1_3:125188296-125239016:-|nuORF	65.46538089061403	0.16805504838372562	5				NaN	NaN	0	NaN	8216	4310	12526
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12529	35.212	NaN	1806.3	30	0	145.04	0.038	+			25978	LSITSKVQELQ	11	66	623.3560439994322	1244.6975350656644	2	623.3561401367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSITSKVQELQ_	ENSG00000126777|ENST00000395314|KTN1;KTN1|p.A1102Gfs*15|2|0.3|ENSG00000126777|chr14:55670756-55670757|-/A|frameshift_variant;KTN1|p.H994Sfs*2|1|0.35|ENSG00000126777|chr14:55659677-55659678|-/C|frameshift_variant;KTN1|p.K1078Nfs*12|1|0.3|ENSG00000126777|chr14:55667292-55667292|A/-|frameshift_variant;KTN1|p.K1101Rfs*18|1|0.4|ENSG00000126777|chr14:55670757-55670757|A/-|frameshift_variant;KTN1|p.P993Lfs*6|1|0.36|ENSG00000126777|chr14:55659678-55659678|C/-|frameshift_variant;nc|ENSG00000126777|Q86UP2-2|KTN1;nc|ENSG00000126777|Q86UP2-3|KTN1;nc|ENSG00000126777|Q86UP2-4|KTN1	50.033510581677724	0.4206539900604183	5				NaN	NaN	0	NaN	8217	4310	12526
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12540	35.237	NaN	1971.4	30	0	708.74	0.214	+			6858	CKSDAPTGDV	10	58	496.7209442019421	991.4273354706842	2	496.7212829589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CKSDAPTGDV_	ENSG00000113384|ENST00000265070|GOLPH3;GOLPH3|p.L132V|1|0.23|ENSG00000113384|chr5:32135650-32135650|G/C|missense_variant	30.317721548370564	0.6322445173429027	5				NaN	NaN	0	NaN	8225	4313	12539
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12541	35.241	NaN	2489.9	30	0	239.37	0.106	+			41099	SVINPGAIYR	10	72	545.306602570895	1088.59865220859	2	545.3065185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVINPGAIYR_	ENSG00000115232|ENST00000397033|ITGA4;ENST00000465522.5_1_2:182322141-182350724:+|nuORF;ENST00000476089.1_1_2:182321937-182323202:+|nuORF;ENST00000484404.1_1_2:182322441-182339919:+|nuORF;ITGA4|p.T615Nfs*11|1|0.22|ENSG00000115232|chr2:181509798-181509799|-/A|frameshift_variant;nc|ENSG00000115232|P13612-2|ITGA4	35.15202426646627	0.5927656479315102	5				NaN	NaN	0	NaN	8226	4313	12539
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12542	35.243	NaN	2046	30	0	155.56	0.106			+	23201	KYAEFETL	8	64	500.7530756485789	NaN	0	500.7550354003906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KYAEFETL_	REV__ENSG00000111879|ENST00000338891|FAM184A;REV__FAM184A|p.D182Tfs*21|1|0.26|ENSG00000111879|chr6:119024430-119024430|T/-|frameshift_variant;REV__FAM184A|p.L424Ffs*10|1|0.45|ENSG00000111879|chr6:119020038-119020039|-/A|frameshift_variant;REV__nc|ENSG00000111879|Q8NB25-2|FAM184A;REV__nc|ENSG00000111879|Q8NB25-3|FAM184A;REV__nc|ENSG00000111879|Q8NB25-4|FAM184A	53.351449002276354	1.7418937515398478	5				NaN	NaN	0	NaN	8227	4313	12539
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12543	35.245	NaN	1750.3	30	0	472.58	0.035	+			30500	QAFGEKITM	9	56	512.7605770526894	1023.5066011721789	2	512.76025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QAFGEKITM_	ENSG00000137575|ENST00000260130|SDCBP;ENST00000424643.3_1_8:70855645-70855750:+|nuORF;ENST00000519115.5_1_8:59477592-59490768:+|nuORF;ENST00000523441.1_1_8:59490633-59492419:+|nuORF;nc|ENSG00000137575|O00560-2|SDCBP;nc|ENSG00000137575|O00560-3|SDCBP	47.657333605630114	0.33044192980041115	5				NaN	NaN	0	NaN	8228	4313	12539
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12555	35.27	NaN	1976.7	30	0	375.58	0.214	+			30245	PSVENKSL	8	54	437.237060546875	NaN	0	437.237060546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PSVENKSL_	ENST00000231368.9_1_5:96349439-96349490:+|nuORF	52.936696900407355	1.7418937515398478	5				NaN	NaN	0	NaN	8237	4316	12554
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12556	35.274	NaN	3674.6	30	0	358.94	0.106	+			41563	SVQETVLPIK	10	59	557.3299669845696	1112.6453810359392	2	557.3294677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVQETVLPIK_	ENSG00000169057|ENST00000453960|MECP2;MECP2|p.E432Afs*3|1|0.03|ENSG00000169057|chrX:154030534-154030535|CC/-|frameshift_variant;MECP2|p.K449Sfs*33|1|0.2|ENSG00000169057|chrX:154030482-154030482|T/-|frameshift_variant;nc|ENSG00000169057|P51608|MECP2	104.01359247289065	0.06577755598965461	5				NaN	NaN	0	NaN	8238	4316	12554
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12557	35.276	NaN	2376.5	30	0	446.26	0.106			+	48401	VTIGGFSVTK	10	60	504.7905794537933	1007.5666059743867	2	504.7904357910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTIGGFSVTK_	REV__ARPP21|p.A382V|1|0.26|ENSG00000172995|chr3:35721754-35721754|C/T|missense_variant	76.16968421966216	0.22691431239609447	5				NaN	NaN	0	NaN	8239	4316	12554
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12558	35.277	NaN	1638	30	0	336.82	0.106	+			29158	NVIHNLATY	9	56	522.778076171875	NaN	0	522.778076171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NVIHNLATY_	ENSG00000123353|ENST00000243045|ORMDL2	42.396135135203025	0.2590952873412954	5				NaN	NaN	0	NaN	8240	4316	12554
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12559	35.279	NaN	1818.2	30	0	364.14	0.034	+			45712	VAALLPAAAR	10	54	476.8004507733887	951.5863486135775	2	476.7999267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VAALLPAAAR_	ENST00000352681.7_2_16:727083-728243:+|nuORF	53.351449002276354	0.42630798468005626	5				NaN	NaN	0	NaN	8241	4316	12554
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12566	35.296	NaN	1294.8	30	0	729.1	0.139	+			380	AASAAPIL	8	26	357.21463745675385	NaN	0	357.2146301269531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AASAAPIL_	ENST00000597953.1_1_3:142719901-142720060:-|nuORF	23.036711822280957	1.7418937515398478	5				NaN	NaN	0	NaN	8245	4319	12565
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12575	35.318	NaN	3155.8	30	0	402.86	0.214	+			6388	AVVELVTVK	9	61	479.30278805916885	NaN	0	479.3031005859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVVELVTVK_	ENSG00000182220|ENST00000636580|ATP6AP2;nc|ENSG00000182220|O75787-2|ATP6AP2	63.53385203322761	0.134247007536971	5				NaN	NaN	0	NaN	8251	4322	12574
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12576	35.321	NaN	1315.3	30	0	130.85	0.034	+			17406	IAQIAQALL	9	51	470.79530625228074	939.5760595713615	2	471.2966003417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IAQIAQALL_	ENSG00000184611|ENST00000332142|KCNH7;KCNH7|p.D991Kfs*12|1|0.24|ENSG00000184611|chr2:162380007-162380014|GCATGTCA/-|frameshift_variant;KCNH7|p.N805Mfs*21|1|0.44|ENSG00000184611|chr2:162396939-162396939|T/-|frameshift_variant;KCNH7|p.T216Sfs*24|1|0.03|ENSG00000184611|chr2:162517976-162517977|-/AGTATACGGA|frameshift_variant;nc|ENSG00000184611|Q9NS40-2|KCNH7	31.954861631926434	0.5046124803899898	5				NaN	NaN	0	NaN	8252	4322	12574
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12582	35.338	NaN	4127	30	0	511.48	0.214	+			2216	ALRAAPTALP	10	62	490.7982803963435	979.582007859487	2	490.798095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ALRAAPTALP_	nc|ENSG00000284723|Q8NH09|OR8S1	34.172542307311794	0.6007644933930345	5				NaN	NaN	0	NaN	8255	4325	12581
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12583	35.341	NaN	1699.3	30	0	158.24	0.106				-1	AELPLCPCR	9	61	529.7619751789679	NaN	0	529.7619018554688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_AELPLC(Carbamidomethyl (C))PCR_	ENSG00000178171|ENST00000321420|AMER3	37.15910966729921	0.2899585034171616	5				NaN	NaN	0	NaN	8256	4325	12581
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12584	35.343	NaN	1418.4	30	0	149.37	0.106	+			43791	TLLDPGEHY	9	51	522.7545119863918	NaN	0	522.7539672851562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TLLDPGEHY_	ENSG00000145623|ENST00000274276|OSMR	37.15910966729921	0.2899585034171616	5				NaN	NaN	0	NaN	8257	4325	12581
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12585	35.345	NaN	1576.6	30	0	169.95	0.106	+			18017	IIIAEVVNK	9	58	499.81631817128624	997.6180834093725	2	499.8159484863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IIIAEVVNK_	ENSG00000128641|ENST00000392318|MYO1B;nc|ENSG00000128641|O43795-2|MYO1B	82.24051045832904	0.08786059719216216	5				NaN	NaN	0	NaN	8258	4325	12581
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12586	35.347	NaN	1706.8	30	0	164.05	0.035			+	-1	ALLLCLALY	9	59	525.3084021370504	NaN	0	525.7825317382812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_ALLLC(Carbamidomethyl (C))LALY_	REV__ENSG00000268104|ENST00000598581|SLC6A14	29.841539824830324	0.32690339240668626	5				NaN	NaN	0	NaN	8259	4325	12581
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12595	35.368	NaN	3219.9	30	0	376.2	0.214	+			11728	FSENERLI	8	58	504.26207143090613	1006.5095899286123	2	504.261962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FSENERLI_	ENST00000502732.5_1_1:179076600-179076849:-|nuORF	80.45461616416974	0.3197856089436126	5				NaN	NaN	0	NaN	8265	4328	12594
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12596	35.372	NaN	3242.6	30	0	351.76	0.106	+			8238	EAFKAIGTAY	10	61	535.7798794037393	1069.5452058742785	2	535.780517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EAFKAIGTAY_	ENSG00000148719|ENST00000444643|DNAJB12;nc|ENSG00000148719|Q9NXW2-2|DNAJB12	107.00750918261382	0.05688644658934505	5				NaN	NaN	0	NaN	8266	4328	12594
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12597	35.374	NaN	2878.1	30	0	1518.7	0.032				-1	 	0	42	379.20967858199685	756.4048042307937	2	379.2095031738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8267	4328	12594
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12608	35.398	NaN	5012.1	30	0	653.73	0.214	+			4027	ATDAVGIVLK	10	62	493.7978048783632	985.5810568235264	2	493.7979736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATDAVGIVLK_	ENSG00000132676|ENST00000368336|DAP3;ENST00000462978.1_1_1:155697409-155701908:+|nuORF;nc|ENSG00000132676|P51398-2|DAP3;nc|ENSG00000132676|P51398-3|DAP3	85.86182877749512	0.1547657473298402	5				NaN	NaN	0	NaN	8275	4331	12607
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12609	35.401	NaN	4144.2	30	0	835.65	0.106	+			17518	IDKYTEVL	8	68	490.76960786986183	979.5246628065237	2	490.77117919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IDKYTEVL_	ENSG00000142541|ENST00000391857|RPL13A;ENST00000425147.1_1_21:26734448-26734742:+|nuORF	62.107414245175825	0.4809183816468817	5				NaN	NaN	0	NaN	8276	4331	12607
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12610	35.403	NaN	2263.5	30	0	295.59	0.106	+			552	ADFETVRM	8	53	484.729181643986	967.443810354772	2	484.7293395996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ADFETVRM_	ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2	71.87747018426188	0.391254423828572	5				NaN	NaN	0	NaN	8277	4331	12607
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12611	35.405	NaN	1059.6	30	0	107.76	0.106	+			42636	TAVGHALVL	9	41	440.76610136631393	879.5176497994279	2	440.7663879394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TAVGHALVL_	COL6A3|p.A2956Lfs*45|1|0.33|ENSG00000163359|chr2:237336234-237336234|C/-|frameshift_variant;COL6A3|p.A2957Lfs*44|1|0.33|ENSG00000163359|chr2:237336232-237336232|A/-|frameshift_variant;COL6A3|p.G3016Vfs*19|1|0.34|ENSG00000163359|chr2:237334810-237334810|G/-|frameshift_variant;ENSG00000163359|ENST00000295550|COL6A3;ENST00000491769.1_1_2:238233419-238250825:-|nuORF;nc|ENSG00000163359|P12111-2|COL6A3;nc|ENSG00000163359|P12111-4|COL6A3	33.51558372728122	0.4900267029546261	5				NaN	NaN	0	NaN	8278	4331	12607
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12612	35.407	NaN	2084.6	30	0	178.78	0.106			+	51145	YNWALLSLE	9	65	554.7873026589565	1107.560052384713	2	554.7882080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YNWALLSLE_	REV__ENST00000325222.8_1_7:148451159-148451216:+|nuORF	34.172542307311794	0.4838870758800184	5				NaN	NaN	0	NaN	8279	4331	12607
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12613	35.409	NaN	3222.8	30	0	347.34	0.035	+			1383	AEVKGVYQF	9	64	520.774509043168	1039.534465153136	2	520.774169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEVKGVYQF_	ENSG00000166557|ENST00000299705|TMED3;nc|ENSG00000166557|Q9Y3Q3-2|TMED3	69.6276240434122	0.14239879520340665	5				NaN	NaN	0	NaN	8280	4331	12607
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12614	35.409	NaN	1771.8	30	0	74.704	0.154				-1	 	0	77	651.0238037109375	NaN	0	651.0238037109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8281	4331	12607
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12623	35.431	NaN	2320.1	30	0	235.68	0.142	+			26072	LSLSLSGPSV	10	62	480.274657444355	958.53476195551	2	480.27349853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSLSLSGPSV_	ENST00000481856.1_1_7:4213871-4218865:+|nuORF	62.107414245175825	0.3466735403679669	5				NaN	NaN	0	NaN	8287	4334	12622
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12632	35.455	NaN	2375.3	30	0	713.33	0.214	+			18145	ILLSVNPAAL	10	59	505.8161842797611	1009.6178156263222	2	506.3182067871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ILLSVNPAAL_	ENSG00000166926|ENST00000684409|MS4A6E	39.252832667884924	0.5560298534376815	5				NaN	NaN	0	NaN	8293	4337	12631
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12633	35.459	NaN	1949.6	30	0	274.77	0.106				-1	 	0	56	564.337004507664	1126.659456082128	2	564.3385620117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8294	4337	12631
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12634	35.46	NaN	1370.3	30	0	141.18	0.106			+	26416	LTFCLPMIH	9	57	537.7772166393077	1073.5398803454152	2	537.77783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LTFCLPMIH_	REV__tr|U7SUG2|U7SUG2_FUSNUAcylcarrierproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01144PE=4SV=1	42.47446043378293	0.39123495718708534	5				NaN	NaN	0	NaN	8295	4337	12631
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12635	35.462	NaN	1613.5	30	0	267.54	0.034			+	11599	FPSGLRAAR	9	55	487.77970233092105	973.5448517286421	2	487.7804870605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FPSGLRAAR_	REV__ENSG00000172425|ENST00000302783|TTC36;REV__ENST00000533501.5_1_11:118398735-118401628:+|nuORF;REV__nc|ENSG00000172425|A6NLP5-2|TTC36	47.657333605630114	0.33044192980041115	5				NaN	NaN	0	NaN	8296	4337	12631
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12645	35.484	NaN	13559	30	0	2660.1	0.214	+			3842	ATALEYVYK	9	73	529.2816136729781	1056.548674412756	2	529.2822875976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATALEYVYK_	ENSG00000135441|ENST00000548925|BLOC1S1;ENST00000549147.1_1_12:56113198-56113390:+|nuORF;nc|ENSG00000135441|P78537-2|BLOC1S1	145.15565482312357	0.00806134135205793	5				NaN	NaN	0	NaN	8303	4340	12644
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12646	35.488	NaN	4829.3	30	0	584.22	0.106			+	607	ADSALLKGAL	10	66	479.781450363977	957.548347794754	2	479.7815856933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ADSALLKGAL_	REV__ENSG00000103227|ENST00000262301|LMF1;REV__ENST00000569516.5_1_16:904534-921479:-|nuORF;REV__nc|ENSG00000103227|Q96S06-2|LMF1	60.11826168202944	0.36476464221954025	5				NaN	NaN	0	NaN	8304	4340	12644
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12647	35.49	NaN	3170.3	30	0	389.67	0.106	+			14181	GSQFFITTK	9	62	514.7738700517616	1027.5331871703231	2	514.7739868164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GSQFFITTK_	ENSG00000114857|ENST00000232978|NKTR;ENSG00000138398|ENST00000260970|PPIG;nc|ENSG00000138398|Q13427-2|PPIG;NKTR|p.K429Nfs*37|1|0.2|ENSG00000114857|chr3:42636986-42636986|A/-|frameshift_variant;NKTR|p.N670Ifs*43|1|0.14|ENSG00000114857|chr3:42637707-42637707|A/-|frameshift_variant;NKTR|p.R859Kfs*9|1|0.28|ENSG00000114857|chr3:42638271-42638272|-/A|frameshift_variant;NKTR|p.S692Ffs*17|1|0.1|ENSG00000114857|chr3:42637779-42637791|CAAGGAGCAGATC/-|frameshift_variant;PPIG|p.N420Mfs*33|1|0.4|ENSG00000138398|chr2:169636512-169636512|A/-|frameshift_variant	84.81729255234993	0.07947707105691067	5				NaN	NaN	0	NaN	8305	4340	12644
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12648	35.491	NaN	1518.7	30	0	238.04	0.033	+			25856	LSFCASRA	8	41	427.7111336641392	NaN	0	427.711181640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSFCASRA_	ENSG00000170605|ENST00000641329|OR9K2;nc|ENSG00000170605|Q8NGE7|OR9K2	44.116797842482775	1.7418937515398478	5				NaN	NaN	0	NaN	8306	4340	12644
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12660	35.517	NaN	3092.2	30	0	385.79	0.143	+			38566	SSFGNMIYK	9	67	523.752138948019	1045.489724962838	2	523.7537841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSFGNMIYK_	ENSG00000120137|ENST00000239231|PANK3	60.11826168202944	0.21262886028301267	5				NaN	NaN	0	NaN	8315	4343	12659
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12667	35.537	NaN	1906.2	30	0	179.57	0.143			+	17070	HRGGWSAVL	9	62	491.7646880743479	981.5148232154958	2	491.76385498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HRGGWSAVL_	REV__ENST00000270357.9_2_2:241517773-241518097:+|nuORF	40.77816245573522	0.41113185337114944	5				NaN	NaN	0	NaN	8319	4346	12666
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12677	35.561	NaN	2310.7	30	0	355.54	0.214			+	10783	FAGRLLTPT	9	55	488.28442656157455	974.5543001899491	2	488.7859802246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FAGRLLTPT_	REV__ENSG00000204356|ENST00000375429|NELFE;REV__ENST00000481121.5_1_6:31921790-31926696:-|nuORF;REV__ENST00000488426.5_1_6:31920080-31922695:-|nuORF;REV__ENST00000492185.5_1_6:31921790-31922695:-|nuORF;REV__nc|ENSG00000204356|P18615-3|NELFE;REV__nc|ENSG00000204356|P18615-4|NELFE	27.882242232435846	0.5426732730940306	5				NaN	NaN	0	NaN	8326	4349	12676
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12678	35.565	NaN	1641.2	30	0	288.09	0.036	+			46133	VDLQSPAAQH	10	59	533.270115987216	NaN	0	533.2698974609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VDLQSPAAQH_	MCM4|p.D66H|1|0.45|ENSG00000104738|chr8:47961641-47961641|G/C|missense_variant	39.252832667884924	0.37128895876774715	5				NaN	NaN	0	NaN	8327	4349	12676
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12688	35.587	NaN	5068.8	30	0	1176.4	0.214	+			15500	GVAPFTIAR	9	53	466.2716252158343	930.5286974984687	2	466.27117919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVAPFTIAR_	COL6A3|p.A2956Lfs*45|1|0.33|ENSG00000163359|chr2:237336234-237336234|C/-|frameshift_variant;COL6A3|p.A2957Lfs*44|1|0.33|ENSG00000163359|chr2:237336232-237336232|A/-|frameshift_variant;COL6A3|p.G1770Vfs*12|1|0.05|ENSG00000163359|chr2:237366878-237366879|-/TGGTGTAA|frameshift_variant;COL6A3|p.G2207Efs*35|1|0.22|ENSG00000163359|chr2:237354908-237354908|G/-|frameshift_variant;COL6A3|p.G3016Vfs*19|1|0.34|ENSG00000163359|chr2:237334810-237334810|G/-|frameshift_variant;COL6A3|p.P2319Qfs*12|1|0.06|ENSG00000163359|chr2:237348359-237348359|G/-|frameshift_variant;COL6A3|p.V1771Sfs*8|3|0.08|ENSG00000163359|chr2:237366876-237366876|C/-|frameshift_variant;ENSG00000163359|ENST00000295550|COL6A3;nc|ENSG00000163359|P12111-2|COL6A3;nc|ENSG00000163359|P12111-3|COL6A3;nc|ENSG00000163359|P12111-4|COL6A3;nc|ENSG00000163359|P12111-5|COL6A3	69.6276240434122	0.14239879520340665	5				NaN	NaN	0	NaN	8334	4352	12687
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12689	35.59	NaN	5061.1	30	0	532.54	0.106	+			28089	NAFEVAEKY	9	65	535.7611067841433	1069.5076606350865	2	535.761962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NAFEVAEKY_	ENSG00000130402|ENST00000252699|ACTN4;ENST00000588618.5_1_19:39138385-39212431:+|nuORF	133.9934435666947	0.013297982075521412	5				NaN	NaN	0	NaN	8335	4352	12687
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12690	35.592	NaN	2544.5	30	0	299.43	0.035	+			42988	TEKIISAEL	9	64	502.2869375063268	1002.5593220794536	2	502.2871398925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TEKIISAEL_	ENSG00000073614|ENST00000399788|KDM5A;nc|ENSG00000073614|P29375-2|KDM5A	58.22992032128504	0.22837015374068087	5				NaN	NaN	0	NaN	8336	4352	12687
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12699	35.614	NaN	8032.6	30	0	2273.8	0.214			+	26690	LVHLSTELK	9	72	520.3106495018344	1038.6067460704687	2	520.3109741210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LVHLSTELK_	REV__ENSG00000054654|ENST00000555002|SYNE2;REV__nc|ENSG00000054654|Q8WXH0|SYNE2;REV__SYNE2|p.A5240Qfs*5|1|0.07|ENSG00000054654|chr14:64152639-64152639|G/-|frameshift_variant;REV__SYNE2|p.F4992Lfs*13|1|0.39|ENSG00000054654|chr14:64140067-64140067|T/-|frameshift_variant;REV__SYNE2|p.L5308Ifs*18|1|0.12|ENSG00000054654|chr14:64158750-64158751|GG/-|frameshift_variant;REV__SYNE2|p.S6651Rfs*83|1|0.29|ENSG00000054654|chr14:64220596-64220597|-/G|frameshift_variant	85.35947970620816	0.07794846947388434	5				NaN	NaN	0	NaN	8342	4355	12698
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12700	35.617	NaN	1554.6	30	0	187.9	0.035	+			13428	GLGSSRPSSAP	11	57	508.26106630492706	1014.5075796766541	2	508.2616882324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GLGSSRPSSAP_	ENSG00000166579|ENST00000334527|NDEL1;ENST00000402554.7_1_17:8363409-8370338:+|nuORF;ENST00000578172.1_1_17:8370194-8370338:+|nuORF	29.550750289552195	0.6798279264880025	5				NaN	NaN	0	NaN	8343	4355	12698
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12708	35.636	NaN	5652	30	0	614.02	0.214	+			42307	TAFDVAEKY	9	71	522.2557763825531	1042.4969998319061	2	522.25634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAFDVAEKY_	ENSG00000072110|ENST00000394419|ACTN1;ENST00000554508.5_1_14:69367621-69387744:-|nuORF;nc|ENSG00000072110|P12814-2|ACTN1;nc|ENSG00000072110|P12814-4|ACTN1;nc|ENSG00000072110|P12814|ACTN1	70.8162118820467	0.13725933411854815	5				NaN	NaN	0	NaN	8348	4358	12707
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12709	35.639	NaN	1849.9	30	0	208.52	0.036			+	8076	DVQTESTGIF	10	53	548.7598532916973	1095.5051536501944	2	549.2611083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DVQTESTGIF_	REV__ENSG00000139304|ENST00000644991|PTPRQ;REV__PTPRQ|p.K1365Rfs*5|1|0.42|ENSG00000139304|chr12:80549539-80549539|A/-|frameshift_variant;REV__PTPRQ|p.N2031Kfs*10|1|0.46|ENSG00000139304|chr12:80652805-80652806|-/A|frameshift_variant;REV__PTPRQ|p.Q1869Afs*5|1|0.38|ENSG00000139304|chr12:80620361-80620362|-/A|frameshift_variant;REV__PTPRQ|p.Q791Kfs*18|1|0.3|ENSG00000139304|chr12:80506122-80506122|C/-|frameshift_variant;REV__PTPRQ|p.Y1402Lfs*5|1|0.3|ENSG00000139304|chr12:80549654-80549654|A/-|frameshift_variant	35.15202426646627	0.5927656479315102	5				NaN	NaN	0	NaN	8349	4358	12707
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12717	35.658	NaN	2188.8	30	0	201.47	0.214	+			30065	PQGRHKTEV	9	60	526.2864419365934	1050.5583309399867	2	526.286865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PQGRHKTEV_	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42|TTN;TTN|p.A12650Gfs*4|1|0.4|ENSG00000155657|chr2:178633489-178633490|-/T|frameshift_variant;TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;TTN|p.D20259Rfs*40|1|0.44|ENSG00000155657|chr2:178583105-178583106|-/T|frameshift_variant;TTN|p.D21555Ifs*6|1|0.33|ENSG00000155657|chr2:178576659-178576659|G/-|frameshift_variant;TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;TTN|p.E15132Sfs*22|1|0.27|ENSG00000155657|chr2:178612094-178612094|C/-|frameshift_variant;TTN|p.E20392Dfs*6|1|0.04|ENSG00000155657|chr2:178582357-178582358|-/TTTAAAATTA|frameshift_variant;TTN|p.E20392Kfs*4|1|0.02|ENSG00000155657|chr2:178582359-178582360|-/TTTT|frameshift_variant;TTN|p.F18705Lfs*8|1|0.37|ENSG00000155657|chr2:178590687-178590687|A/-|frameshift_variant;TTN|p.G12742Vfs*2|1|0.05|ENSG00000155657|chr2:178632983-178632983|C/-|frameshift_variant;TTN|p.G14712Dfs*11|1|0.37|ENSG00000155657|chr2:178614341-178614341|G/-|frameshift_variant;TTN|p.G19920Afs*12|1|0.42|ENSG00000155657|chr2:178584961-178584961|G/-|frameshift_variant;TTN|p.G22029Efs*22|2|0.13|ENSG00000155657|chr2:178575125-178575125|T/-|frameshift_variant;TTN|p.I10495Nfs*4|1|0.37|ENSG00000155657|chr2:178685288-178685289|-/T|frameshift_variant;TTN|p.I24998Nfs*2|1|0.35|ENSG00000155657|chr2:178566216-178566217|-/T|frameshift_variant;TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;TTN|p.K10923Rfs*104|2|0.23|ENSG00000155657|chr2:178679362-178679362|T/-|frameshift_variant;TTN|p.K11381Nfs*25|1|0.07|ENSG00000155657|chr2:178671133-178671133|T/-|frameshift_variant;TTN|p.K11556Sfs*15|1|0.39|ENSG00000155657|chr2:178652287-178652287|T/-|frameshift_variant;TTN|p.K14271Qfs*5|1|0.02|ENSG00000155657|chr2:178617351-178617352|-/G|frameshift_variant;TTN|p.K26626Nfs*34|1|0.34|ENSG00000155657|chr2:178561331-178561331|T/-|frameshift_variant;TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant;TTN|p.N13487Tfs*49|1|0.34|ENSG00000155657|chr2:178621335-178621335|T/-|frameshift_variant;TTN|p.N15496Ifs*16|1|0.09|ENSG00000155657|chr2:178610116-178610116|T/-|frameshift_variant;TTN|p.P16126Rfs*3|1|0.25|ENSG00000155657|chr2:178607301-178607302|TG/-|frameshift_variant;TTN|p.P22810Hfs*10|1|0.03|ENSG00000155657|chr2:178572780-178572781|-/AAAT|frameshift_variant;TTN|p.V10632Yfs*16|1|0.16|ENSG00000155657|chr2:178683254-178683254|T/-|frameshift_variant;TTN|p.V11008Sfs*13|1|0.33|ENSG00000155657|chr2:178678146-178678147|-/T|frameshift_variant;TTN|p.V11345Ffs*4|1|0.4|ENSG00000155657|chr2:178672044-178672044|T/-|frameshift_variant;TTN|p.V13823*|1|0.28|ENSG00000155657|chr2:178620027-178620027|C/-|frameshift_variant;TTN|p.V22573Cfs*4|2|0.31|ENSG00000155657|chr2:178573492-178573492|C/-|frameshift_variant;TTN|p.V27442Cfs*4|1|0.05|ENSG00000155657|chr2:178558107-178558108|-/A|frameshift_variant	37.15910966729921	0.4535818937225704	5				NaN	NaN	0	NaN	8354	4361	12716
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12718	35.661	NaN	2043	30	0	213.95	0.106	+			237	AAMKALQAL	9	53	458.7675373702764	915.5205218073528	2	458.7679748535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAMKALQAL_	ENSG00000040341|ENST00000524300|STAU2;ENST00000521451.5_1_8:74528012-74659064:-|nuORF;nc|ENSG00000040341|Q9NUL3-2|STAU2;nc|ENSG00000040341|Q9NUL3-3|STAU2;nc|ENSG00000040341|Q9NUL3-7|STAU2;nc|ENSG00000040341|Q9NUL3-8|STAU2;STAU2|p.C491Lfs*31|1|0.39|ENSG00000040341|chr8:73552072-73552073|-/G|frameshift_variant;STAU2|p.K274Nfs*22|1|0.09|ENSG00000040341|chr8:73613813-73613813|T/-|frameshift_variant;STAU2|p.K410Ifs*9|1|0.07|ENSG00000040341|chr8:73552313-73552314|-/A|frameshift_variant;STAU2|p.L259Tfs*15|2|0.48|ENSG00000040341|chr8:73613860-73613861|-/T|frameshift_variant	53.351449002276354	0.2690372970092375	5				NaN	NaN	0	NaN	8355	4361	12716
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12719	35.663	NaN	1341.4	30	0	66.795	0.106				-1	VTAPSCPFMH	10	63	573.7575047206406	NaN	0	573.7575073242188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_VTAPSC(Carbamidomethyl (C))PFMH_	ENST00000446816.1_1_2:96874348-96906424:+|nuORF	27.882242232435846	0.4086243523356342	5				NaN	NaN	0	NaN	8356	4361	12716
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12720	35.665	NaN	935.98	30	0	74.861	0.035			+	28621	NKTYMGRR	8	49	513.2669677734375	NaN	0	513.2669677734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NKTYMGRR_	REV__ENST00000377989.8_2_6:25138607-25138802:-|nuORF	29.14955571784316	1.7418937515398478	5				NaN	NaN	0	NaN	8357	4361	12716
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12725	35.679	NaN	1151	30	0	162.74	0.214			+	31784	QPLHITSI	8	42	454.7632128073763	907.5118726815526	2	454.76336669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QPLHITSI_	REV__BUB3|p.I231Gfs*30|1|0.05|ENSG00000154473|chr10:123162349-123162350|-/GGTAA|frameshift_variant	25.450171626174864	0.7628259754767981	5				NaN	NaN	0	NaN	8359	4364	12724
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12726	35.683	NaN	1393.4	30	0	408.51	0.034			+	44248	TRYVTAIV	8	43	461.7711519128593	921.5277508925186	2	461.77117919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TRYVTAIV_	REV__ENSG00000135312|ENST00000369947|HTR1B	26.79610172149135	0.7524337208463756	5				NaN	NaN	0	NaN	8360	4364	12724
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12734	35.703	NaN	2935.6	30	0	284.7	0.214	+			34949	SAAKLLTEY	9	64	498.27386932985786	994.5331857265157	2	498.27392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAAKLLTEY_	ENSG00000189221|ENST00000338702|MAOA;MAOA|p.G405Afs*12|1|0.26|ENSG00000189221|chrX:43741995-43741995|G/-|frameshift_variant	88.17693792209575	0.07000514020414955	5				NaN	NaN	0	NaN	8365	4367	12733
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12735	35.707	NaN	3921.6	30	0	391.47	0.036	+			41550	SVQDVIYVR	9	69	539.7981484606626	1077.581743988125	2	539.7991333007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVQDVIYVR_	ENSG00000099282|ENST00000373290|TSPAN15	79.48907831485694	0.09975780661107167	5				NaN	NaN	0	NaN	8366	4367	12733
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12748	35.734	NaN	3675.4	30	0	671.72	0.214			+	-1	FLIAMCRL	8	60	512.276504468002	1022.5384560028041	2	512.2767944335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_FLIAMC(Carbamidomethyl (C))RL_	REV__ENST00000448519.2_1_1:37979033-37979108:-|nuORF	77.94384346573518	0.3407065481025094	5				NaN	NaN	0	NaN	8376	4370	12747
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12749	35.738	NaN	3456.8	30	0	244.67	0.106	+			10455	EVNKFQMAY	9	65	565.2705583750044	1128.5265638168087	2	565.2706909179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EVNKFQMAY_	ENSG00000140319|ENST00000267884|SRP14	94.00642277110589	0.05356993013874309	5				NaN	NaN	0	NaN	8377	4370	12747
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12750	35.74	NaN	812.78	30	0	496.29	0.106	+			3523	ASSLSHLLVL	10	23	347.20965578089863	1038.6071379428959	3	347.209716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASSLSHLLVL_	ADCY4|p.R528Gfs*3|1|0.38|ENSG00000129467|chr14:24326152-24326152|G/-|frameshift_variant;ENSG00000129467|ENST00000418030|ADCY4;ENST00000555591.1_1_14:24801652-24802170:-|nuORF	17.364965105453717	0.7282106878714807	5				NaN	NaN	0	NaN	8378	4370	12747
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12751	35.741	NaN	7582.1	30	0	5159.7	0.106				-1	 	0	70	559.9550234155514	1676.843240846854	3	559.955322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8379	4370	12747
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12752	35.743	NaN	1374.8	30	0	107.38	0.106	+			11042	FEMATRAAL	9	49	505.26044771792	NaN	0	505.2602844238281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FEMATRAAL_	ENSG00000067560|ENST00000418115|RHOA	42.86426827375447	0.2558691296974908	5				NaN	NaN	0	NaN	8380	4370	12747
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12753	35.745	NaN	2570.8	30	0	173.53	0.106	+			35955	SEGPLRPVL	9	55	484.2820098787209	966.5494668242418	2	484.28192138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SEGPLRPVL_	ENSG00000112200|ENST00000370706|ZNF451;ENST00000444273.6_1_6:56954967-57015704:+|nuORF;nc|ENSG00000112200|Q9Y4E5-2|ZNF451;nc|ENSG00000112200|Q9Y4E5-4|ZNF451;ZNF451|p.K220Nfs*85|1|0.34|ENSG00000112200|chr6:57134823-57134823|A/-|frameshift_variant;ZNF451|p.L304Dfs*12|1|0.07|ENSG00000112200|chr6:57141999-57142000|TT/-|frameshift_variant;ZNF451|p.T701Nfs*2|1|0.1|ENSG00000112200|chr6:57148180-57148181|-/A|frameshift_variant	37.15910966729921	0.4535818937225704	5				NaN	NaN	0	NaN	8381	4370	12747
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12754	35.747	NaN	992.05	30	0	96.494	0.038			+	21364	KMDRVNTVVY	10	52	612.8233032226562	NaN	0	612.8233032226562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KMDRVNTVVY_	REV__tr|U7SVE2|U7SVE2_FUSNUPASdomainS-boxproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01227PE=4SV=1	45.97224482568171	0.33106653400957564	5				NaN	NaN	0	NaN	8382	4370	12747
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12765	35.771	NaN	3819.7	30	0	1230.1	0.214	+			49905	VYTTMAEHF	9	64	549.7494245724785	1097.4842962117568	2	549.750244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYTTMAEHF_	ENSG00000117472|ENST00000372003|TSPAN1;TSPAN1|p.T119M|1|0.33|ENSG00000117472|chr1:46184801-46184801|C/T|missense_variant	82.30502934623384	0.08758161712619916	5				NaN	NaN	0	NaN	8390	4373	12764
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12766	35.774	NaN	1863	30	0	342.44	0.106	+			14427	GTAQLTLLH	9	48	477.2740392613042	952.5335255894084	2	477.2738342285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTAQLTLLH_	ENSG00000254470|ENST00000532090|AP5B1;ENST00000316846.2_11:65545618-65547282:-|nuORF	118.74307786436346	0.02196067127630568	5				NaN	NaN	0	NaN	8391	4373	12764
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12767	35.776	NaN	2362.3	30	0	307.44	0.035			+	25146	LLSGSVLLLS	10	59	501.3154289623849	1000.6163049915698	2	501.8169250488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LLSGSVLLLS_	REV__ENSG00000156642|ENST00000345330|NPTN;REV__ENST00000563753.1_1_15:73884305-73925556:-|nuORF;REV__ENST00000565325.5_1_15:73854253-73925580:-|nuORF;REV__nc|ENSG00000156642|Q9Y639-1|NPTN;REV__nc|ENSG00000156642|Q9Y639-3|NPTN;REV__nc|ENSG00000156642|Q9Y639-4|NPTN;REV__nc|ENSG00000156642|Q9Y639-5|NPTN;REV__NPTN-ANXA2|1|fusion	29.14955571784316	0.6417842315402807	5				NaN	NaN	0	NaN	8392	4373	12764
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12777	35.798	NaN	3424.4	30	0	765.09	0.214	+			11873	FTGLIGPMK	9	64	482.2700821722359	962.5256114112718	2	482.27001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FTGLIGPMK_	CON__ENSEMBL:ENSBTAP00000031900;ENSG00000047457|ENST00000264613|CP;ENST00000467010.2_1_8:92169620-92169905:+|nuORF;ENST00000489736.5_1_3:148904295-148925363:-|nuORF;ENST00000490639.5_1_3:148895590-148939579:-|nuORF;ENST00000497797.5_1_3:148905800-148917562:-|nuORF	66.42927471994793	0.16001998865088202	5				NaN	NaN	0	NaN	8399	4376	12776
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12778	35.802	NaN	5410	30	0	732.52	0.106	+			24899	LKLVNASV	8	55	422.2682922993851	842.5220316655702	2	422.2680969238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LKLVNASV_	ENSG00000038382|ENST00000344204|TRIO;ENSG00000160145|ENST00000682506|KALRN;ENST00000393501.5_1_3:124103736-124207203:+|nuORF;ENST00000515144.5_1_5:14293150-14488426:+|nuORF;nc|ENSG00000038382|O75962-2|TRIO;nc|ENSG00000038382|O75962-4|TRIO;nc|ENSG00000038382|O75962-5|TRIO;nc|ENSG00000160145|O60229-2|KALRN;nc|ENSG00000160145|O60229|KALRN;TRIO|p.E1028Rfs*29|1|0.41|ENSG00000038382|chr5:14369389-14369389|G/-|frameshift_variant;TRIO|p.K1219Nfs*43|2|0.16|ENSG00000038382|chr5:14387518-14387518|A/-|frameshift_variant;TRIO|p.V2351Cfs*62|3|0.3|ENSG00000038382|chr5:14487672-14487672|C/-|frameshift_variant	63.30626980617807	0.4690498839812213	5				NaN	NaN	0	NaN	8400	4376	12776
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12779	35.803	NaN	2655.4	30	0	253.59	0.036	+			6958	CPMPHIPWP	9	64	539.2548504459302	1076.4951479586603	2	539.2559814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_CPMPHIPWP_	MAB21L2|p.W187C|1|0.86|ENSG00000181541|chr4:150583590-150583590|G/T|missense_variant	49.21078951299608	0.3122205139198386	5				NaN	NaN	0	NaN	8401	4376	12776
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12787	35.823	NaN	3828.8	30	0	1040.9	0.214	+			15739	GVSAATFLK	9	50	447.2581030960925	892.501653258985	2	447.2577209472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVSAATFLK_	ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;nc|ENSG00000184110|Q99613-2|EIF3C	95.81516180277367	0.04847050768394289	5				NaN	NaN	0	NaN	8406	4379	12786
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12788	35.827	NaN	2247.7	30	0	174.64	0.106	+			3843	ATALEYVYK	9	63	529.2816136729781	1056.548674412756	2	529.2814331054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATALEYVYK_	ENSG00000135441|ENST00000548925|BLOC1S1;ENST00000549147.1_1_12:56113198-56113390:+|nuORF;nc|ENSG00000135441|P78537-2|BLOC1S1	37.81151784470057	0.4459294069877048	5				NaN	NaN	0	NaN	8407	4379	12786
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12789	35.829	NaN	2058.4	30	0	118.43	0.05				-1	 	0	59	666.6820639706557	1997.024362512167	3	666.68212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8408	4379	12786
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12798	35.849	NaN	4713.5	30	0	2182.7	0.214	+			32546	QVTDFGFAK	9	58	506.7589096508551	1011.5032663685103	2	506.7585754394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QVTDFGFAK_	ENSG00000072062|ENST00000308677|PRKACA;ENSG00000142875|ENST00000370685|PRKACB;ENSG00000165059|ENST00000377276|PRKACG;ENST00000536649.5_1_19:14208073-14223129:-|nuORF;ENST00000587533.1_1_19:14208360-14208546:-|nuORF;nc|ENSG00000072062|P17612-2|PRKACA;nc|ENSG00000142875|P22694-10|PRKACB;nc|ENSG00000142875|P22694-3|PRKACB;nc|ENSG00000142875|P22694-4|PRKACB;nc|ENSG00000142875|P22694-5|PRKACB;nc|ENSG00000142875|P22694-6|PRKACB;nc|ENSG00000142875|P22694-7|PRKACB;nc|ENSG00000142875|P22694-8|PRKACB;nc|ENSG00000142875|P22694-9|PRKACB;nc|ENSG00000142875|P22694|PRKACB	47.657333605630114	0.33044192980041115	5				NaN	NaN	0	NaN	8414	4382	12797
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12799	35.853	NaN	2448.1	30	0	178.16	0.035	+			11380	FLLKPQNY	8	64	511.78516378732564	NaN	0	511.7866516113281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FLLKPQNY_	ADGRL4|p.M380Rfs*18|1|0.04|ENSG00000162618|chr1:78921731-78921732|-/TATTTATAAATGTTGCTTTTTC|frameshift_variant;ENSG00000162618|ENST00000370742|ADGRL4	65.89745868150666	1.7418937515398478	5				NaN	NaN	0	NaN	8415	4382	12797
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12811	35.879	NaN	1025.6	30	0	160.25	0.214	+			846	AEGPPRLAI	9	50	462.26898140150905	NaN	0	462.2682800292969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEGPPRLAI_	ENSG00000089693|ENST00000203630|MLF2	47.657333605630114	0.2228375344433429	5				NaN	NaN	0	NaN	8424	4385	12810
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12812	35.882	NaN	1220.4	30	0	121	0.034	+			50396	YAAGAKLVL	9	45	453.27635462024153	904.5381563072831	2	453.2760925292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YAAGAKLVL_	ENSG00000109016|ENST00000395511|DHRS7B	38.80614096846853	0.43426287593479557	5				NaN	NaN	0	NaN	8425	4385	12810
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12818	35.898	NaN	2088.6	30	0	253.77	0.214	+			26616	LVAALAEATV	10	59	479.28453611655675	956.5545192999135	2	479.2845153808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LVAALAEATV_	ENST00000527128.5_1_9:100000750-100013832:+|nuORF	49.44154591367651	0.46214596422418036	5				NaN	NaN	0	NaN	8428	4388	12817
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12819	35.902	NaN	1400.3	30	0	91.074	0.035	+			27683	MPVAQQPVY	9	61	516.7650659591691	NaN	0	516.7631225585938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MPVAQQPVY_	ENSG00000164120|ENST00000296522|HPGD;ENST00000511499.5_1_4:175413109-175416797:-|nuORF;ENST00000512410.1_1_4:175416602-175443578:-|nuORF;nc|ENSG00000164120|P15428-2|HPGD;nc|ENSG00000164120|P15428-3|HPGD;nc|ENSG00000164120|P15428-5|HPGD	40.5726180659479	0.27166212580479165	5				NaN	NaN	0	NaN	8429	4388	12817
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12828	35.924	NaN	2483.4	30	0	271.4	0.142	+			51328	YSLVSREL	8	59	483.7667579526232	965.5189629720464	2	483.7668762207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YSLVSREL_	ENSG00000119777|ENST00000238788|TMEM214	60.11826168202944	0.5006107059937851	5				NaN	NaN	0	NaN	8435	4391	12827
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12838	35.947	NaN	2446.6	30	0	250.56	0.144	+			28862	NPWDNKAVY	9	64	553.7673050329815	1105.520057132763	2	553.7672119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NPWDNKAVY_	ENSG00000162298|ENST00000377190|SYVN1;ENST00000449943.5_1_11:64897669-64899838:-|nuORF;ENST00000529207.5_1_11:64898917-64899817:-|nuORF;nc|ENSG00000162298|Q86TM6-2|SYVN1;nc|ENSG00000162298|Q86TM6-3|SYVN1;SYVN1|p.N368Qfs*129|1|0.33|ENSG00000162298|chr11:65130663-65130664|-/G|frameshift_variant;SYVN1|p.N368Tfs*117|1|0.4|ENSG00000162298|chr11:65130664-65130664|G/-|frameshift_variant	52.936696900407355	0.27249468807391813	5				NaN	NaN	0	NaN	8442	4394	12837
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12846	35.969	NaN	4803.4	30	0	1036	0.214	+			20380	KESTLHLVL	9	55	520.3106495018344	1038.6067460704687	2	520.3119506835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KESTLHLVL_	ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000392399.3_1_2:137087013-137087097:-|nuORF;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;UBB|p.D191Tfs*35|2|0.18|ENSG00000170315|chr17:16382471-16382471|C/-|frameshift_variant;UBB|p.D191Tfs*35|2|0.18|ENSG00000170315|chr17:16382471-16382471|C/-|frameshift_variant	67.49366992349736	0.1516260258713357	5				NaN	NaN	0	NaN	8447	4397	12845
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12847	35.973	NaN	4623.3	30	0	569.89	0.106	+			30136	PRTIYSSF	8	56	485.7536714630444	969.4927899928888	2	485.7535400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PRTIYSSF_	DLX5|p.R138H|1|0.13|ENSG00000105880|chr7:97022312-97022312|C/T|missense_variant;ENSG00000105880|ENST00000648378|DLX5;ENSG00000115844|ENST00000234198|DLX2;nc|ENSG00000105880|P56178-2|DLX5;nc|ENSG00000115844|Q07687-2|DLX2	99.37495909608758	0.2510236104623939	5				NaN	NaN	0	NaN	8448	4397	12845
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12848	35.975	NaN	1489.4	30	0	213.6	0.038	+			47038	VLEKCLQEDV	10	37	392.53692626953125	NaN	0	392.53692626953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VLEKCLQEDV_	ENSG00000152240|ENST00000282058|HAUS1;nc|ENSG00000152240|Q96CS2-2|HAUS1	32.75053402867276	0.3926392905881664	5				NaN	NaN	0	NaN	8449	4397	12845
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12859	35.999	NaN	1358.4	30	0	101.63	0.214			+	2610	AQHGPVARR	9	57	496.2821124647858	NaN	0	496.281982421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AQHGPVARR_	REV__ENSG00000075073|ENST00000373306|TACR2	38.80614096846853	0.28164298475537564	5				NaN	NaN	0	NaN	8457	4400	12858
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12860	36.002	NaN	1273.4	30	0	85.082	0.106	+			27987	MVSLVSGASGY	11	61	535.762451171875	NaN	0	535.762451171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MVSLVSGASGY_	ENSG00000113163|ENST00000643780|CERT1;nc|ENSG00000113163|Q9Y5P4-2|CERT1;nc|ENSG00000113163|Q9Y5P4-3|CERT1	32.81241826257853	0.4191849651971536	5				NaN	NaN	0	NaN	8458	4400	12858
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12861	36.004	NaN	1249.8	30	0	53.312	0.106			+	4833	ATPGPLSRCR	10	55	529.282958984375	NaN	0	529.282958984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATPGPLSRCR_	REV__ENST00000298532.2_1_9:139276772-139277807:-|nuORF	28.081489160057373	0.40797012399963245	5				NaN	NaN	0	NaN	8459	4400	12858
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12862	36.006	NaN	1673.8	30	0	191.93	0.036	+			8407	EAPNPIHLTV	10	64	545.7986317815147	NaN	0	545.7994995117188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EAPNPIHLTV_	ENSG00000175390|ENST00000651655|EIF3F;ENST00000530219.1_1_11:8014470-8016722:+|nuORF	41.42661286455405	0.3598046802465243	5				NaN	NaN	0	NaN	8460	4400	12858
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12872	36.03	NaN	3222.8	30	0	905.44	0.145	+			51011	YIYDGELVSK	10	65	593.8033727934115	1185.592192653623	2	593.8045654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YIYDGELVSK_	ENSG00000117620|ENST00000533028|SLC35A3;nc|ENSG00000283761|Q9Y2D2-2|SLC35A3	54.722347961057174	0.4138398245444204	5				NaN	NaN	0	NaN	8467	4403	12871
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12884	36.057	NaN	6229.2	30	0	553.13	0.214	+			38114	SPVSKGILQY	10	70	546.3082433810001	1090.6019338288002	2	546.3084716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SPVSKGILQY_	ENSG00000167325|ENST00000300738|RRM1	86.88156770896713	0.14892753630261096	5				NaN	NaN	0	NaN	8476	4406	12883
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12885	36.061	NaN	5293	30	0	1211.1	0.106	+			45362	TVTAQILLK	9	60	493.81590039378324	985.6172478543665	2	493.8165283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVTAQILLK_	ENSG00000178982|ENST00000248342|EIF3K;ENST00000514461.1_1_4:116964948-116965134:-|nuORF;ENST00000586932.5_1_19:39109833-39116793:+|nuORF;ENST00000593062.5_1_19:39109833-39121488:+|nuORF;nc|ENSG00000178982|Q9UBQ5-2|EIF3K	70.39856735676683	0.13906523160059378	5				NaN	NaN	0	NaN	8477	4406	12883
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12886	36.063	NaN	2843.3	30	0	1167.8	0.034	+			35348	SAPFVARAL	9	51	466.2718496936721	930.5291464541442	2	466.2716369628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAPFVARAL_	ENSG00000104866|ENST00000221462|PPP1R37	45.97224482568171	0.3502073465782774	5				NaN	NaN	0	NaN	8478	4406	12883
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12898	36.088	NaN	4307.8	30	0	558.94	0.214	+			27103	MANGAVIHL	9	61	463.24965017341685	924.4847474136337	2	463.2496337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MANGAVIHL_	ENSG00000099995|ENST00000215793|SF3A1;nc|ENSG00000099995|Q15459-2|SF3A1	110.33723246496265	0.028653888678955353	5				NaN	NaN	0	NaN	8487	4409	12897
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12899	36.092	NaN	9033.3	30	0	6759.1	0.106			+	50105	WGRWWFWLERR	11	60	559.9554559674966	1676.8445385026898	3	559.955322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WGRWWFWLERR_	REV__ENST00000246635.7_1_17:39661629-39661743:-|nuORF	3.408713201661513	0.8659727860201725	5				NaN	NaN	0	NaN	8488	4409	12897
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12900	36.094	NaN	3253.4	30	0	1184.2	0.106	+			31060	QEYAQVIKM	9	64	555.286641705001	1108.5587304768019	2	555.287353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QEYAQVIKM_	ENSG00000173674|ENST00000379607|EIF1AX;ENSG00000198692|ENST00000361365|EIF1AY;ENST00000465253.1_1_Y:22737757-22750047:+|nuORF	47.657333605630114	0.33044192980041115	5				NaN	NaN	0	NaN	8489	4409	12897
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12901	36.095	NaN	2368	30	0	551.23	0.106				-1	LCSTLANIY	9	55	527.7652755322895	1053.5159981313789	2	527.766357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_LC(Carbamidomethyl (C))STLANIY_	ENSG00000176900|ENST00000322049|OR51T1	34.172542307311794	0.4838870758800184	5				NaN	NaN	0	NaN	8490	4409	12897
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12902	36.097	NaN	1897.6	30	0	264.73	0.106			+	7489	DGFAQRLF	8	55	477.24576778537653	952.4769826375531	2	477.2452697753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DGFAQRLF_	REV__ENSG00000133597|ENST00000072869|ADCK2	25.450171626174864	0.7628259754767981	5				NaN	NaN	0	NaN	8491	4409	12897
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12903	36.099	NaN	1434.6	30	0	194.18	0.034	+			47707	VSFGESVLK	9	54	483.2686942266523	964.5228355201046	2	483.26861572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VSFGESVLK_	ENSG00000105856|ENST00000222574|HBP1;nc|ENSG00000105856|O60381-2|HBP1;nc|ENSG00000105856|O60381-3|HBP1	58.2462437865262	0.22823408064396822	5				NaN	NaN	0	NaN	8492	4409	12897
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12915	36.124	NaN	8991.7	30	0	1698.3	0.214	+			49610	VYGSFASKL	9	66	486.26359605906373	970.5126391849275	2	486.26300048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYGSFASKL_	ENSG00000155096|ENST00000337198|AZIN1	85.86182877749512	0.07653218437724067	5				NaN	NaN	0	NaN	8501	4412	12914
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12916	36.128	NaN	3402.4	30	0	444.98	0.035			+	21271	KLNGSKFDL	9	72	511.28760577897486	1020.5606586247497	2	511.2877197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KLNGSKFDL_	REV__tr|U7STB3|U7STB3_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00993PE=4SV=1	34.172542307311794	0.4838870758800184	5				NaN	NaN	0	NaN	8502	4412	12914
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12926	36.15	NaN	1336.7	30	0	101.37	0.214	+			5682	AVDVFQVAK	9	56	488.77681338214586	975.5390738310917	2	488.7765197753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVDVFQVAK_	ENSG00000144724|ENST00000474889|PTPRG;ENST00000475012.5_1_3:62203523-62278979:+|nuORF;nc|ENSG00000144724|P23470-2|PTPRG	49.44154591367651	0.3095138337212152	5				NaN	NaN	0	NaN	8509	4415	12925
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12927	36.153	NaN	1035.8	30	0	86.58	0.032			+	46672	VGGLHAVF	8	44	400.2268367360934	798.4391205389868	2	400.72821044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VGGLHAVF_	REV__ENSG00000141314|ENST00000269051|RHBDL3;REV__nc|ENSG00000141314|P58872-2|RHBDL3;REV__nc|ENSG00000141314|P58872-3|RHBDL3	33.49298260027079	0.7007254697536482	5				NaN	NaN	0	NaN	8510	4415	12925
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12937	36.175	NaN	9456.1	30	0	2618.4	0.214	+			17101	HSGPVIPVY	9	61	484.7636539228252	967.5127549124504	2	484.7638854980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HSGPVIPVY_	ENSG00000114315|ENST00000232424|HES1	57.81127852772723	0.2318599694398087	5				NaN	NaN	0	NaN	8517	4418	12936
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12938	36.179	NaN	6004.2	30	0	807.09	0.106				-1	 	0	53	457.24233134722243	912.4701097612449	2	457.242919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8518	4418	12936
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12939	36.181	NaN	3299.4	30	0	715.01	0.106	+			43367	TGEAMLVIK	9	59	481.2733999228671	960.5322469125342	2	481.2733459472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TGEAMLVIK_	tr|U7T480|U7T480_FUSNUhistidinekinaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00375PE=4SV=1	98.62937762414208	0.04060045538121712	5				NaN	NaN	0	NaN	8519	4418	12936
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12940	36.183	NaN	2580.4	30	0	294.39	0.106	+			43049	TELGKIATL	9	63	473.2847488378332	944.5549447424664	2	473.2845764160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TELGKIATL_	tr|U7STP1|U7STP1_FUSNUP-typeCa(2+)transporterOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01417PE=4SV=1	60.11826168202944	0.21262886028301267	5				NaN	NaN	0	NaN	8520	4418	12936
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12941	36.185	NaN	3913.1	30	0	783.69	0.106	+			39983	STMLQAIER	9	62	524.7766066051506	1047.5386602771011	2	524.77783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STMLQAIER_	ENSG00000181789|ENST00000314797|COPG1	75.65223720490533	0.11634833104049533	5				NaN	NaN	0	NaN	8521	4418	12936
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12942	36.186	NaN	3699.8	30	0	314.91	0.036	+			33130	REPWDPVQA	9	68	549.2725739935577	1096.5305950539152	2	549.2740478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_REPWDPVQA_	ENSG00000159433|ENST00000290607|STARD9	60.11826168202944	0.21262886028301267	5				NaN	NaN	0	NaN	8522	4418	12936
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12943	36.187	NaN	2424	30	0	270.18	0.14			+	21372	KMFQDFLL	8	57	521.2755645671622	1040.5365762011243	2	521.276611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KMFQDFLL_	REV__ENSG00000159445|ENST00000368814|THEM4	37.81151784470057	0.6698925118251505	5				NaN	NaN	0	NaN	8523	4418	12936
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12955	36.214	NaN	2995	30	0	620.74	0.214	+			18977	IVSDFTIGR	9	61	504.2794004738375	1006.544248014475	2	504.2793273925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IVSDFTIGR_	ENSG00000110713|ENST00000324932|NUP98;nc|ENSG00000110713|P52948-2|NUP98;nc|ENSG00000110713|P52948-3|NUP98;nc|ENSG00000110713|P52948-4|NUP98;nc|ENSG00000110713|P52948-6|NUP98;nc|ENSG00000110713|P52948|NUP98;NUP98|p.N1328Tfs*89|2|0.22|ENSG00000110713|chr11:3699159-3699159|T/-|frameshift_variant	77.31757898189308	0.1091473830098891	5				NaN	NaN	0	NaN	8532	4421	12954
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12956	36.218	NaN	1130.1	30	0	150.46	0.035			+	33739	RPPGRMGGGL	10	57	499.27251605061866	996.5304791680373	2	499.2724914550781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RPPGRMGGGL_	REV__ENSG00000145907|ENST00000356245|G3BP1	37.15910966729921	0.575322462179216	5				NaN	NaN	0	NaN	8533	4421	12954
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12965	36.238	NaN	2642.8	30	0	269.58	0.214	+			46406	VENMLDLAW	9	70	545.7633815690616	1089.5122102049231	2	546.2650756835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VENMLDLAW_	ENSG00000167207|ENST00000647318|NOD2;ENST00000526417.6_1_16:50727539-50743880:+|nuORF;ENST00000532206.1_1_16:50731151-50744498:+|nuORF;nc|ENSG00000167207|Q9HC29-3|NOD2;nc|ENSG00000167207|Q9HC29|NOD2;NOD2|p.P528Qfs*235|4|0.37|ENSG00000167207|chr16:50711488-50711488|C/-|frameshift_variant;NOD2|p.S506Pfs*11|2|0.28|ENSG00000167207|chr16:50711420-50711420|G/-|frameshift_variant;NOD2|p.S506Vfs*73|1|0.24|ENSG00000167207|chr16:50711419-50711420|-/G|frameshift_variant	53.351449002276354	0.2690372970092375	5				NaN	NaN	0	NaN	8539	4424	12964
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12966	36.242	NaN	1790.2	30	0	122.43	0.106	+			18983	IVSKHTYIC	9	63	532.2830280848269	NaN	0	532.2827758789062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IVSKHTYIC_	ADGRG4|p.Q246Hfs*32|1|0.09|ENSG00000156920|chrX:136344443-136344450|AGATAGAT/-|frameshift_variant	42.396135135203025	0.2590952873412954	5				NaN	NaN	0	NaN	8540	4424	12964
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12967	36.243	NaN	1994.8	30	0	110.59	0.106	+			2108	ALGGRGSWAAP	11	67	521.7767333984375	NaN	0	521.7767333984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ALGGRGSWAAP_	ENST00000474433.5_1_7:105254161-105283525:-|nuORF	56.72105179125745	0.2643439005903171	5				NaN	NaN	0	NaN	8541	4424	12964
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12968	36.245	NaN	1819.1	30	0	671.77	0.036				-1	FSPLSIALAM	10	35	355.8592224121094	NaN	0	355.8592224121094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_FSPLSIALAM(Oxidation (M))_	ENSG00000163536|ENST00000446050|SERPINI1;SERPINI1|p.N83Mfs*8|1|0.48|ENSG00000163536|chr3:167789371-167789371|A/-|frameshift_variant;SERPINI1|p.Y131Ifs*3|1|0.32|ENSG00000163536|chr3:167790505-167790506|-/A|frameshift_variant	29.170058357718403	0.40439580130713204	5				NaN	NaN	0	NaN	8542	4424	12964
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12978	36.267	NaN	1543.4	30	0	98.827	0.142				-1	VLMEARVN	8	55	474.2526846678025	946.490816402405	2	474.2523498535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_VLM(Oxidation (M))EARVN_	tr|U7STJ5|U7STJ5_FUSNUTyrrecombinasedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01507PE=3SV=1	29.14955571784316	0.7342621283720113	5				NaN	NaN	0	NaN	8549	4427	12977
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12987	36.289	NaN	2640.8	30	0	310.37	0.141	+			46210	VEAGGMQAL	9	48	438.2183871303584	874.4222213275168	2	438.2182922363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VEAGGMQAL_	ENSG00000168036|ENST00000349496|CTNNB1;ENSG00000173801|ENST00000393931|JUP	104.74654710444128	0.034358562718640136	5				NaN	NaN	0	NaN	8555	4430	12986
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12992	36.305	NaN	2379.7	30	0	496.96	0.214	+			10349	ETTVRSVQL	9	58	516.7903945252683	NaN	0	516.790771484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ETTVRSVQL_	LAMA3|p.P420Lfs*49|1|0.38|ENSG00000053747|chr18:23773570-23773570|C/-|frameshift_variant	27.882242232435846	0.3367954786602879	5				NaN	NaN	0	NaN	8557	4433	12991
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12993	36.309	NaN	1253	30	0	163.59	0.106			+	21227	KLHTTDVLL	9	52	520.3106495018344	1038.6067460704687	2	520.3123168945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KLHTTDVLL_	REV__ENSG00000138468|ENST00000394095|SENP7;REV__nc|ENSG00000138468|Q9BQF6-2|SENP7;REV__nc|ENSG00000138468|Q9BQF6-4|SENP7;REV__nc|ENSG00000138468|Q9BQF6-5|SENP7	26.69291269510374	0.5537881896960711	5				NaN	NaN	0	NaN	8558	4433	12991
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12994	36.311	NaN	1497.3	30	0	102.92	0.034			+	10265	ETLMVIVK	8	54	466.7777404785156	NaN	0	466.7777404785156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ETLMVIVK_	REV__ENSG00000081237|ENST00000442510|PTPRC;REV__nc|ENSG00000081237|P08575-10|PTPRC;REV__nc|ENSG00000081237|P08575-4|PTPRC;REV__nc|ENSG00000081237|P08575-5|PTPRC;REV__nc|ENSG00000081237|P08575-6|PTPRC;REV__nc|ENSG00000081237|P08575-7|PTPRC;REV__nc|ENSG00000081237|P08575-8|PTPRC;REV__nc|ENSG00000081237|P08575-9|PTPRC;REV__PTPRC|p.N1239Tfs*17|1|0.43|ENSG00000081237|chr1:198755972-198755972|A/-|frameshift_variant;REV__PTPRC|p.Q1150Pfs*6|1|0.27|ENSG00000081237|chr1:198752707-198752708|-/C|frameshift_variant	31.954861631926434	1.7418937515398478	5				NaN	NaN	0	NaN	8559	4433	12991
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13000	36.327	NaN	2877.4	30	0	372.2	0.214	+			47084	VLISEAQAI	9	59	472.2765652324078	942.5385775316156	2	472.27691650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VLISEAQAI_	DYNC1H1|p.W4201Gfs*43|1|0.42|ENSG00000197102|chr14:102043958-102043958|G/-|frameshift_variant;ENSG00000197102|ENST00000360184|DYNC1H1;ENST00000556791.1_1_14:102499420-102503925:+|nuORF	51.33545320467046	0.2872990594074956	5				NaN	NaN	0	NaN	8562	4436	12999
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13001	36.33	NaN	4905.1	30	0	931.88	0.106	+			19084	IYIGGQEHF	9	65	532.2639393409802	1062.5133257487603	2	532.2645263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IYIGGQEHF_	ENSG00000158125|ENST00000379416|XDH;XDH|p.Q919Rfs*10|1|0.37|ENSG00000158125|chr2:31350104-31350104|C/-|frameshift_variant	58.78195531508484	0.22376836668196862	5				NaN	NaN	0	NaN	8563	4436	12999
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13002	36.332	NaN	3539.8	30	0	386.37	0.106	+			17627	IEIYVQKV	8	64	496.29451376181504	990.5744745904301	2	496.294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IEIYVQKV_	CLTC|p.A1374*|1|0.05|ENSG00000141367|chr17:59683464-59683465|-/TA|frameshift_variant;CLTCL1|p.H915Ifs*56|1|0.35|ENSG00000070371|chr22:19221430-19221430|G/-|frameshift_variant;ENSG00000070371|ENST00000427926|CLTCL1;ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000070371|P53675-2|CLTCL1;nc|ENSG00000141367|Q00610-2|CLTC	62.107414245175825	0.4809183816468817	5				NaN	NaN	0	NaN	8564	4436	12999
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13003	36.334	NaN	966.41	30	0	79.036	0.106	+			17334	IAIDKVVQ	8	44	443.2735900878906	NaN	0	443.2735900878906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IAIDKVVQ_	ENSG00000083223|ENST00000375963|TUT7;ENST00000277141.10_2_9:88941382-88968129:-|nuORF;nc|ENSG00000083223|Q5VYS8-2|TUT7;nc|ENSG00000083223|Q5VYS8-3|TUT7;nc|ENSG00000083223|Q5VYS8-4|TUT7;nc|ENSG00000083223|Q5VYS8-5|TUT7;nc|ENSG00000083223|Q5VYS8-6|TUT7	35.61828744233558	1.7418937515398478	5				NaN	NaN	0	NaN	8565	4436	12999
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13004	36.336	NaN	1971	30	0	164.02	0.035			+	6769	CERHARLK	8	61	506.777286222631	1011.540019512062	2	506.7772521972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_CERHARLK_	REV__ENSG00000164619|ENST00000649409|BMPER	37.15910966729921	0.6739408393984688	5				NaN	NaN	0	NaN	8566	4436	12999
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13015	36.36	NaN	3526.2	30	0	822.43	0.214	+			15393	GTYDILVTK	9	55	505.28190081279814	1008.5492486923963	2	505.2816162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTYDILVTK_	ENSG00000114302|ENST00000265563|PRKAR2A;nc|ENSG00000114302|P13861-2|PRKAR2A	72.87924865735499	0.12833875048249987	5				NaN	NaN	0	NaN	8574	4439	13014
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13016	36.363	NaN	2650	30	0	246.17	0.035			+	21015	KKIEEAWE	8	59	516.7712717345594	1031.5279905359187	2	516.771240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KKIEEAWE_	REV__ENSG00000165006|ENST00000297661|UBAP1;REV__nc|ENSG00000165006|Q9NZ09-2|UBAP1;REV__nc|ENSG00000165006|Q9NZ09-3|UBAP1;REV__nc|ENSG00000165006|Q9NZ09-4|UBAP1;REV__UBAP1|p.P256Lfs*5|1|0.39|ENSG00000165006|chr9:34241787-34241787|C/-|frameshift_variant	40.5726180659479	0.6527593143185008	5				NaN	NaN	0	NaN	8575	4439	13014
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13024	36.382	NaN	4205.7	30	0	423.92	0.214	+			35517	SAVDVHINM	9	64	493.2422402219469	984.4699275106938	2	493.2418212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAVDVHINM_	ENSG00000204463|ENST00000676615|BAG6;nc|ENSG00000204463|P46379-2|BAG6;nc|ENSG00000204463|P46379-4|BAG6;nc|ENSG00000204463|P46379-5|BAG6;nc|ENSG00000204463|P46379|BAG6	75.04331003522576	0.118981335847003	5				NaN	NaN	0	NaN	8580	4442	13023
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13025	36.385	NaN	995.29	30	0	47.391	0.034			+	46247	VEEQSSKF	8	54	477.23239786718847	NaN	0	477.2326354980469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VEEQSSKF_	REV__ENSG00000169813|ENST00000682386|HNRNPF	56.72105179125745	1.7418937515398478	5				NaN	NaN	0	NaN	8581	4442	13023
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13034	36.406	NaN	1499	30	0	117.16	0.214	+			31365	QKDGIIFAL	9	55	502.7927752155818	1003.5709974979636	2	502.7921142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QKDGIIFAL_	ENSG00000121988|ENST00000264159|ZRANB3;ENST00000492193.1_1_2:136111018-136262059:-|nuORF;nc|ENSG00000121988|Q5FWF4-3|ZRANB3;ZRANB3|p.R533Dfs*3|1|0.42|ENSG00000121988|chr2:135230870-135230870|T/-|frameshift_variant	37.81151784470057	0.4459294069877048	5				NaN	NaN	0	NaN	8587	4445	13033
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13035	36.409	NaN	1586.4	30	0	146.25	0.036	+			28135	NAIVIHEVY	9	61	529.2870344368574	1056.5595159405148	2	529.287841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NAIVIHEVY_	ENSG00000132849|ENST00000642238|PATJ;ENST00000484562.5_1_1:62228564-62579919:+|nuORF;nc|ENSG00000132849|Q8NI35-2|PATJ;nc|ENSG00000132849|Q8NI35-3|PATJ;nc|ENSG00000132849|Q8NI35-5|PATJ;nc|ENSG00000132849|Q8NI35|PATJ	44.116797842482775	0.37197099687881774	5				NaN	NaN	0	NaN	8588	4445	13033
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13043	36.427	NaN	2408.1	30	0	243.42	0.214	+			51160	YPAQGVQQF	9	63	519.2566175838729	1036.4986822345456	2	519.2564086914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YPAQGVQQF_	EIF4G1|p.P1229Qfs*2|1|0.18|ENSG00000114867|chr3:184327606-184327606|C/-|frameshift_variant;EIF4G1|p.T436Hfs*40|1|0.21|ENSG00000114867|chr3:184321883-184321884|-/C|frameshift_variant;ENSG00000114867|ENST00000346169|EIF4G1;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1	71.29570347882199	0.13518600952103718	5				NaN	NaN	0	NaN	8593	4448	13042
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13044	36.431	NaN	2626.8	30	0	519.5	0.106	+			43379	TGFNGKLVY	9	63	499.7692404949894	997.5239280567788	2	499.7691955566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TGFNGKLVY_	ENSG00000083857|ENST00000441802|FAT1;FAT1|p.G2934Vfs*3|2|0.37|ENSG00000083857|chr4:186617787-186617787|T/-|frameshift_variant;FAT1|p.K1225Nfs*9|1|0.03|ENSG00000083857|chr4:186636885-186636885|G/-|frameshift_variant;FAT1|p.N3847Yfs*7|1|0.03|ENSG00000083857|chr4:186601370-186601371|-/TTATA|frameshift_variant;FAT1|p.P3228Lfs*42|1|0.27|ENSG00000083857|chr4:186611556-186611556|G/-|frameshift_variant;FAT1|p.P4313Lfs*36|1|0.34|ENSG00000083857|chr4:186596602-186596602|G/-|frameshift_variant;FAT1|p.Q2933Hfs*14|1|0.33|ENSG00000083857|chr4:186617787-186617788|-/G|frameshift_variant;FAT1|p.T1364Yfs*8|1|0.23|ENSG00000083857|chr4:186636118-186636119|-/A|frameshift_variant;FAT1|p.V1878Cfs*8|2|0.22|ENSG00000083857|chr4:186620955-186620956|-/G|frameshift_variant	52.936696900407355	0.27249468807391813	5				NaN	NaN	0	NaN	8594	4448	13042
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13045	36.433	NaN	1473.8	30	0	321.62	0.033	+			34988	SAAQPGVAF	9	38	424.21929458673003	846.4240362402601	2	424.2190856933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAAQPGVAF_	ENSG00000108061|ENST00000369452|SHOC2;nc|ENSG00000108061|Q9UQ13-2|SHOC2	42.396135135203025	0.392153681582562	5				NaN	NaN	0	NaN	8595	4448	13042
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13054	36.454	NaN	2974.4	30	0	483.11	0.214			+	36173	SELHLNTSL	9	55	507.26732987016493	1012.5201068071299	2	507.2669677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SELHLNTSL_	REV__ENSG00000197323|ENST00000358465|TRIM33;REV__ENST00000476908.1_1_1:114948024-114949565:-|nuORF;REV__nc|ENSG00000197323|Q9UPN9-2|TRIM33	44.377184641726394	0.36891676396732553	5				NaN	NaN	0	NaN	8601	4451	13053
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13055	36.458	NaN	1510.2	30	0	193.42	0.035	+			51301	YSDDIPHAL	9	52	515.7460436129179	1029.4775342926357	2	515.7471313476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YSDDIPHAL_	ENSG00000104408|ENST00000220849|EIF3E;ENST00000518442.5_1_8:109247181-109261015:-|nuORF	55.50420428727701	0.2510918378945873	5				NaN	NaN	0	NaN	8602	4451	13053
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13077	36.528	NaN	1369.3	30	0	107.89	0.142	+			48542	VTNVTSLLK	9	59	487.79804197143267	NaN	0	487.7981872558594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTNVTSLLK_	ENSG00000137076|ENST00000314888|TLN1;ENSG00000171914|ENST00000636159|TLN2;nc|ENSG00000137076|Q9Y490-2|TLN1	45.908116695636124	0.23489233048344244	5				NaN	NaN	0	NaN	8612	4463	13076
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13086	36.551	NaN	2626.5	30	0	351.18	0.214	+			14493	GTCLFVAVK	9	60	497.7730001892464	993.5314474452928	2	497.7730712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GTC(Carbamidomethyl (C))LFVAVK_	ENSG00000198752|ENST00000361246|CDC42BPB	93.19546047674547	0.05585629608842056	5				NaN	NaN	0	NaN	8618	4466	13085
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13087	36.555	NaN	2160.4	30	0	319.34	0.036	+			19103	IYKDSSTFL	9	56	537.2794658511569	1072.5443787691138	2	537.28076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IYKDSSTFL_	ENSG00000145388|ENST00000388822|METTL14	49.536043120802724	0.308405419312776	5				NaN	NaN	0	NaN	8619	4466	13085
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13103	36.607	NaN	1552.8	30	0	171.3	0.214				-1	ATLWGGLLRL	10	57	571.3392560278045	NaN	0	571.3380737304688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))ATLWGGLLRL_	ENSG00000175348|ENST00000534025|TMEM9B	46.45678178249821	0.32800322091223805	5				NaN	NaN	0	NaN	8626	4475	13102
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13104	36.611	NaN	996.25	30	0	101.85	0.033			+	42747	TDLSRIAI	8	45	444.76080322265625	NaN	0	444.76080322265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TDLSRIAI_	REV__ENSG00000004399|ENST00000324093|PLXND1;REV__nc|ENSG00000004399|Q9Y4D7-2|PLXND1;REV__PLXND1|p.N675Tfs*5|2|0.17|ENSG00000004399|chr3:129584392-129584392|G/-|frameshift_variant;REV__PLXND1|p.P1734Hfs*40|1|0.26|ENSG00000004399|chr3:129559716-129559716|G/-|frameshift_variant;REV__PLXND1|p.S1268Qfs*34|1|0.3|ENSG00000004399|chr3:129569907-129569908|-/C|frameshift_variant;REV__PLXND1|p.S804Cfs*5|1|0.07|ENSG00000004399|chr3:129575790-129575791|AG/-|frameshift_variant;REV__PLXND1|p.T1897Rfs*17|1|0.06|ENSG00000004399|chr3:129556402-129556402|G/-|frameshift_variant	37.15910966729921	1.7418937515398478	5				NaN	NaN	0	NaN	8627	4475	13102
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13112	36.629	NaN	1568.8	30	0	150.22	0.214			+	30239	PSTHPWVQ	8	57	476.2378716139737	950.4611902947474	2	476.7396240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PSTHPWVQ_	REV__ENST00000303391.10_2_X:153295129-153295291:-|nuORF	37.15910966729921	0.6739408393984688	5				NaN	NaN	0	NaN	8632	4478	13111
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13113	36.632	NaN	1743.1	30	0	162.89	0.034	+			36445	SEVELMKV	8	49	467.74932599767646	933.484099062153	2	467.74969482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEVELMKV_	ENSG00000115758|ENST00000234111|ODC1	71.87747018426188	0.391254423828572	5				NaN	NaN	0	NaN	8633	4478	13111
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13119	36.649	NaN	2271.1	30	0	270.67	0.214	+			12948	GESSLRNFTM	10	67	571.268773298633	1140.522993664066	2	571.77001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GESSLRNFTM_	ENSG00000153147|ENST00000283131|SMARCA5;ENST00000515531.1_1_4:144464789-144465131:+|nuORF	65.15724298150197	0.31893571707528906	5				NaN	NaN	0	NaN	8636	4481	13118
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13120	36.652	NaN	1667.1	30	0	131.91	0.035	+			45605	TYPDVNNSI	9	56	511.7433304845554	1021.4721080359108	2	511.74383544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TYPDVNNSI_	ENSG00000122958|ENST00000263559|VPS26A;nc|ENSG00000122958|O75436-2|VPS26A	56.43379154798735	0.2433427591689151	5				NaN	NaN	0	NaN	8637	4481	13118
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13131	36.676	NaN	731.86	30	0	177.48	0.141	+			47009	VKVNNGPL	8	35	420.7498877137579	NaN	0	420.7498474121094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VKVNNGPL_	ENSG00000173482|ENST00000580170|PTPRM;nc|ENSG00000173482|P28827|PTPRM;PTPRM|p.T322Rfs*34|1|0.27|ENSG00000173482|chr18:7955247-7955247|C/-|frameshift_variant	26.79610172149135	1.7418937515398478	5				NaN	NaN	0	NaN	8645	4484	13130
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13137	36.693	NaN	3146.2	30	0	267.68	0.214	+			45537	TYITSVSRL	9	66	520.2924710685706	1038.5703892039412	2	520.2932739257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TYITSVSRL_	ENSG00000164823|ENST00000451899|OSGIN2;nc|ENSG00000164823|Q9Y236|OSGIN2	59.93077597824379	0.21419174904018318	5				NaN	NaN	0	NaN	8648	4487	13136
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13138	36.696	NaN	1384.6	30	0	180.83	0.106	+			49911	VYTTTVHW	8	55	503.75299876478107	1005.4914445963622	2	503.7530822753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYTTTVHW_	ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1670Tfs*23|1|0.29|ENSG00000174231|chr17:1659487-1659487|C/-|frameshift_variant	44.53106598305862	0.628196326904373	5				NaN	NaN	0	NaN	8649	4487	13136
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13139	36.698	NaN	1843.9	30	0	551.67	0.035			+	7937	DSISKILPI	9	55	493.3000817997868	984.5856106663737	2	493.3004455566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DSISKILPI_	REV__ENSG00000125247|ENST00000342624|TMTC4;REV__ENST00000462211.5_1_13:101277731-101294530:-|nuORF;REV__ENST00000489713.5_1_13:101277731-101290025:-|nuORF;REV__nc|ENSG00000125247|Q5T4D3-2|TMTC4;REV__nc|ENSG00000125247|Q5T4D3-4|TMTC4;REV__nc|ENSG00000125247|Q5T4D3|TMTC4;REV__TMTC4|p.N491Tfs*19|1|0.36|ENSG00000125247|chr13:100626128-100626128|T/-|frameshift_variant	29.170058357718403	0.5306379469863586	5				NaN	NaN	0	NaN	8650	4487	13136
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13147	36.718	NaN	2376.8	30	0	303.86	0.145	+			8382	EAMRIGAEVY	10	64	569.7816496157387	1137.5487462982774	2	569.7822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EAMRIGAEVY_	ENO1|p.D318Mfs*5|1|0.43|ENSG00000074800|chr1:8864006-8864006|C/-|frameshift_variant;ENO3|p.V367*|1|0.39|ENSG00000108515|chr17:4956599-4956599|G/-|frameshift_variant;ENSG00000074800|ENST00000234590|ENO1;ENSG00000108515|ENST00000519602|ENO3;ENST00000464920.1_1_1:8921421-8930582:-|nuORF;ENST00000521659.5_2_17:4855435-4858958:+|nuORF;nc|ENSG00000074800|P06733-2|ENO1;nc|ENSG00000108515|P13929-2|ENO3;nc|ENSG00000108515|P13929-3|ENO3	115.49404669440601	0.03369372856552391	5				NaN	NaN	0	NaN	8655	4490	13146
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13153	36.736	NaN	3110.9	30	0	707.02	0.214	+			41687	SVSDIIVVAK	10	60	515.8110786083723	1029.6076042835446	2	515.8109130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSDIIVVAK_	ENSG00000006042|ENST00000579849|TMEM98;ENST00000583120.1_1_17:31258522-31263466:+|nuORF	65.2775769800794	0.31784129392001936	5				NaN	NaN	0	NaN	8658	4493	13152
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13154	36.74	NaN	1352.1	30	0	291.39	0.106	+			5359	ATVVGLLAAV	10	54	457.28934833476325	NaN	0	457.2890319824219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATVVGLLAAV_	ENSG00000114544|ENST00000360370|SLC41A3;ENST00000514023.5_1_3:125743683-125802950:-|nuORF;nc|ENSG00000114544|Q96GZ6-2|SLC41A3;nc|ENSG00000114544|Q96GZ6-3|SLC41A3;nc|ENSG00000114544|Q96GZ6-4|SLC41A3;nc|ENSG00000114544|Q96GZ6-5|SLC41A3;nc|ENSG00000114544|Q96GZ6-6|SLC41A3;nc|ENSG00000114544|Q96GZ6-7|SLC41A3;nc|ENSG00000114544|Q96GZ6-8|SLC41A3;nc|ENSG00000114544|Q96GZ6|SLC41A3	44.116797842482775	0.3427969396372342	5				NaN	NaN	0	NaN	8659	4493	13152
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13155	36.742	NaN	1069.2	30	0	62.201	0.106			+	24350	LFLTGEKL	8	51	460.7763403876218	919.5381278420437	2	460.7761535644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LFLTGEKL_	REV__ENST00000262554.6_1_9:94821588-94830281:-|nuORF	31.954861631926434	0.7126016770032289	5				NaN	NaN	0	NaN	8660	4493	13152
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13156	36.744	NaN	1405.9	30	0	331.37	0.106			+	-1	DIGGVVALVAM	11	54	530.7878679118296	NaN	0	530.787109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_DIGGVVALVAM(Oxidation (M))_	REV__ENST00000428453.5_1_15:20588586-20667676:-|nuORF;REV__ENST00000430598.5_1_15:20613931-20667676:-|nuORF;REV__ENST00000437318.5_1_15:20588586-20648641:-|nuORF;REV__ENST00000528584.5_1_15:28900509-28916776:+|nuORF;REV__ENST00000529624.5_3_15:28877823-28916776:+|nuORF;REV__ENST00000530420.5_1_15:28900570-28916776:+|nuORF;REV__nc|ENSG00000290376|Q9BVR0|HERC2P3	23.04248740728303	0.456735970842152	5				NaN	NaN	0	NaN	8661	4493	13152
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13157	36.745	NaN	938.44	30	0	42.482	0.036	+			47472	VQALKYENF	9	58	556.2923281058117	1110.5701032784234	2	556.29248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VQALKYENF_	ENSG00000078142|ENST00000262039|PIK3C3;PIK3C3|p.F623Lfs*43|2|0.38|ENSG00000078142|chr18:42037716-42037716|T/-|frameshift_variant	60.11826168202944	0.21262886028301267	5				NaN	NaN	0	NaN	8662	4493	13152
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13172	36.786	NaN	5072.1	30	0	867.73	0.215	+			1955	AIVAYGLYK	9	62	499.28969855639036	996.5648441795807	2	499.28961181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AIVAYGLYK_	ENSG00000181061|ENST00000321331|HIGD1A;ENST00000470543.1_1_3:42826765-42845976:-|nuORF;nc|ENSG00000181061|Q9Y241-2|HIGD1A	79.9392285194092	0.09781135437301468	5				NaN	NaN	0	NaN	8671	4499	13171
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13173	36.789	NaN	2021.5	30	0	143.87	0.035			+	29563	PFAGGPGRGGY	11	63	518.2567016684045	NaN	0	518.2566528320312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PFAGGPGRGGY_	REV__ENST00000392346.6_2_17:80092036-80109722:-|nuORF	27.882242232435846	0.44115667141176046	5				NaN	NaN	0	NaN	8672	4499	13171
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13185	36.824	NaN	2254.3	30	0	218.55	0.142			+	27467	MLPQCLLK	8	53	473.2667877191508	944.5190225051016	2	473.26666259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MLPQCLLK_	REV__ENSG00000250423|ENST00000691062|KIAA1210;REV__nc|ENSG00000250423|Q9ULL0|KIAA1210	50.0245360154114	0.5941082100236891	5				NaN	NaN	0	NaN	8678	4505	13184
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13199	36.88	NaN	1675.6	30	0	347.88	0.214				-1	VHIGDVCL	8	41	456.7340623457607	NaN	0	456.73406982421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_VHIGDVC(Carbamidomethyl (C))L_	ENSG00000105856|ENST00000222574|HBP1;nc|ENSG00000105856|O60381-2|HBP1;nc|ENSG00000105856|O60381-3|HBP1	44.53106598305862	1.7418937515398478	5				NaN	NaN	0	NaN	8683	4514	13198
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13200	36.883	NaN	2501.4	30	0	436.31	0.106	+			16007	HAQDYVLTY	9	58	555.2666707744507	1108.5187886157014	2	555.2679443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HAQDYVLTY_	ENSG00000134755|ENST00000280904|DSC2	32.81241826257853	0.4965981579233955	5				NaN	NaN	0	NaN	8684	4514	13198
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13201	36.885	NaN	2394.5	30	0	492.56	0.106				-1	SISVLLVAC	9	54	481.2733947820054	960.5322366308109	2	481.2731628417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SISVLLVAC(Carbamidomethyl (C))_	ENSG00000105983|ENST00000353442|LMBR1;nc|ENSG00000105983|Q8WVP7-3|LMBR1	42.47446043378293	0.39123495718708534	5				NaN	NaN	0	NaN	8685	4514	13198
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13202	36.887	NaN	1262.8	30	0	149.62	0.034			+	48602	VTRDLPKV	8	51	464.28497982003205	926.5554067068641	2	464.2845458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTRDLPKV_	REV__UGT2B4|p.A460T|1|0.28|ENSG00000156096|chr4:69480843-69480843|C/T|missense_variant	54.776311868738084	0.5534952410049249	5				NaN	NaN	0	NaN	8686	4514	13198
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13213	36.911	NaN	1525.2	30	0	283.31	0.214	+			47078	VLIGSSHIL	9	55	469.7871356816641	NaN	0	469.78656005859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VLIGSSHIL_	ENSG00000076944|ENST00000221283|STXBP2;ENST00000601061.1_1_19:7712126-7712693:+|nuORF;nc|ENSG00000076944|Q15833-2|STXBP2;nc|ENSG00000076944|Q15833-3|STXBP2	50.0245360154114	0.20652386741182333	5				NaN	NaN	0	NaN	8694	4517	13212
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13214	36.915	NaN	1684.9	30	0	139.19	0.106	+			42935	TEILRVGNI	9	59	507.8005558187785	NaN	0	507.80059814453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEILRVGNI_	ENSG00000116396|ENST00000438661|KCNC4;ENST00000489935.1_1_1:110754121-110766653:+|nuORF;KCNC4|p.S268R|1|0.22|ENSG00000116396|chr1:110223089-110223089|C/A|missense_variant;nc|ENSG00000116396|Q03721-2|KCNC4;nc|ENSG00000116396|Q03721|KCNC4	34.172542307311794	0.30503706118289736	5				NaN	NaN	0	NaN	8695	4517	13212
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13215	36.917	NaN	3225.4	30	0	1003.9	0.038				-1	YEQTFSVWM	9	67	603.7619287722598	1205.5093046113195	2	603.7626342773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_YEQTFSVWM(Oxidation (M))_	ENSG00000080854|ENST00000533871|IGSF9B;IGSF9B|p.T1083Hfs*72|2|0.42|ENSG00000080854|chr11:133920478-133920479|-/G|frameshift_variant;IGSF9B|p.T1083Pfs*48|1|0.11|ENSG00000080854|chr11:133920479-133920479|G/-|frameshift_variant;nc|ENSG00000080854|Q9UPX0|IGSF9B	34.172542307311794	0.4838870758800184	5				NaN	NaN	0	NaN	8696	4517	13212
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13224	36.937	NaN	2945.5	30	0	317.56	0.214	+			42210	TAAGLMHTF	9	62	474.7341416529624	947.4537303727249	2	474.7336120605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAAGLMHTF_	ENSG00000086475|ENST00000327347|SEPHS1;ENSG00000179918|ENST00000478753|SEPHS2;ENST00000446112.1_1_X:72989760-72990255:+|nuORF;nc|ENSG00000086475|P49903-3|SEPHS1;nc|ENSG00000086475|P49903-4|SEPHS1	116.90359126533652	0.02307425081617795	5				NaN	NaN	0	NaN	8702	4520	13223
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13225	36.941	NaN	3122	30	0	386.72	0.106	+			11835	FSVTGRVL	8	53	439.75854035131084	877.5025277694217	2	439.7578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FSVTGRVL_	ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;nc|ENSG00000185164|Q5JPE7-3|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2;NOMO1|p.P1102Hfs*42|1|0.36|ENSG00000103512|chr16:14886838-14886838|C/-|frameshift_variant	71.87747018426188	0.391254423828572	5				NaN	NaN	0	NaN	8703	4520	13223
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13226	36.943	NaN	2134.8	30	0	212.19	0.036	+			18438	ISCVNLAFK	9	67	526.2850952148438	NaN	0	526.2850952148438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_ISC(Carbamidomethyl (C))VNLAFK_	ENST00000227758.6_3_11:102219989-102220022:+|nuORF	65.46538089061403	0.1260090208616529	5				NaN	NaN	0	NaN	8704	4520	13223
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13236	36.965	NaN	1480.9	30	0	92.257	0.214	+			8966	EFHDTRLR	8	61	537.278076171875	NaN	0	537.278076171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EFHDTRLR_	ENST00000325076.9_1_20:34190424-34191756:-|nuORF	37.15910966729921	1.7418937515398478	5				NaN	NaN	0	NaN	8711	4523	13235
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13237	36.968	NaN	1455.4	30	0	254.59	0.036			+	31920	QQLRGPERC	9	58	543.7774047851562	NaN	0	543.7774047851562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QQLRGPERC_	REV__FUBP1|p.S11Lfs*43|2|0.23|ENSG00000162613|chr1:77978975-77978975|G/-|frameshift_variant	26.063383197487333	0.34597851983111116	5				NaN	NaN	0	NaN	8712	4523	13235
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13245	36.987	NaN	2215.7	30	0	234.81	0.214	+			45606	TYPDVNNSI	9	58	511.7433304845554	1021.4721080359108	2	511.7441101074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TYPDVNNSI_	ENSG00000122958|ENST00000263559|VPS26A;nc|ENSG00000122958|O75436-2|VPS26A	60.11826168202944	0.21262886028301267	5				NaN	NaN	0	NaN	8717	4526	13244
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13246	36.991	NaN	2303.8	30	0	370.18	0.035			+	-1	EIMMKLKS	8	55	506.2642475937866	1010.5139422543732	2	506.76568603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Oxidation (M)	_EIM(Oxidation (M))M(Oxidation (M))KLKS_	REV__ZNF608|p.N1313Mfs*8|1|0.11|ENSG00000168916|chr5:124644429-124644429|T/-|frameshift_variant	49.44154591367651	0.597725784090933	5				NaN	NaN	0	NaN	8718	4526	13244
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13255	37.011	NaN	16288	30	0	3078	0.214	+			41594	SVQGIIIYR	9	68	524.8109066172624	1047.6072603013247	2	524.8121337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVQGIIIYR_	ENSG00000005022|ENST00000317881|SLC25A5;ENSG00000151729|ENST00000281456|SLC25A4;ENSG00000169100|ENST00000381401|SLC25A6;ENST00000406156.2_1_6:121975405-121975696:+|nuORF;ENST00000435239.1_1_7:32511604-32512018:+|nuORF	159.27591364854348	0.004707062175358555	5				NaN	NaN	0	NaN	8724	4529	13254
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13256	37.015	NaN	925.94	30	0	64.227	0.033	+			28124	NAISSLLAL	9	48	451.2709969670424	900.5274410008848	2	451.2713928222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NAISSLLAL_	ENST00000295702.8_1_1:155979160-155979334:-|nuORF	39.252832667884924	0.4290233611298554	5				NaN	NaN	0	NaN	8725	4529	13254
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13263	37.034	NaN	1967.6	30	0	183.22	0.214				-1	VTQPMTLLL	9	60	516.293792811974	1030.5730326907478	2	516.2941284179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_VTQPM(Oxidation (M))TLLL_	ENST00000483681.5_2_3:58200257-58200404:-|nuORF	39.252832667884924	0.4290233611298554	5				NaN	NaN	0	NaN	8729	4532	13262
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13264	37.037	NaN	1798.6	30	0	531.73	0.106			+	25239	LNGIQGLNLY	10	66	552.8052251321229	1103.5958973310458	2	552.8052368164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LNGIQGLNLY_	REV__ENSG00000140479|ENST00000611716|PCSK6;REV__nc|ENSG00000140479|P29122-2|PCSK6;REV__nc|ENSG00000140479|P29122-3|PCSK6;REV__nc|ENSG00000140479|P29122-4|PCSK6;REV__nc|ENSG00000140479|P29122-5|PCSK6;REV__nc|ENSG00000140479|P29122-7|PCSK6;REV__nc|ENSG00000140479|P29122-8|PCSK6	33.921630207806714	0.6028135429846169	5				NaN	NaN	0	NaN	8730	4532	13262
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13265	37.039	NaN	791.36	30	0	62.312	0.106	+			26447	LTGRVLAL	8	49	421.77635904138725	NaN	0	421.77685546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LTGRVLAL_	ENSG00000101940|ENST00000376729|WDR13;nc|ENSG00000101940|Q9H1Z4-2|WDR13	71.29570347882199	1.7418937515398478	5				NaN	NaN	0	NaN	8731	4532	13262
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13266	37.041	NaN	1776.4	30	0	136.42	0.106	+			47450	VPVFVHEQQ	9	57	541.785426469581	NaN	0	541.7854614257812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VPVFVHEQQ_	sp|P16726|CVC2_HCMVACapsidvertexcomponent2OS=Humancytomegalovirus(strainAD169)OX=10360GN=CVC2PE=1SV=1;sp|Q6SW65|CVC2_HCMVMCapsidvertexcomponent2OS=Humancytomegalovirus(strainMerlin)OX=295027GN=CVC2PE=3SV=1	30.503639358989545	0.3235605894931338	5				NaN	NaN	0	NaN	8732	4532	13262
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13267	37.043	NaN	1347.7	30	0	122.07	0.106	+			41134	SVITQVLNK	9	56	501.30301711788655	NaN	0	501.3029479980469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVITQVLNK_	ENSG00000164985|ENST00000380733|PSIP1;PSIP1|p.S443Y|1|0.29|ENSG00000164985|chr9:15468722-15468722|G/T|missense_variant	98.62937762414208	0.024200618960070384	5				NaN	NaN	0	NaN	8733	4532	13262
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13268	37.044	NaN	1218.6	30	0	181.08	0.034	+			47841	VSLDGILSK	9	49	466.2765099763174	930.5384670194348	2	466.27587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VSLDGILSK_	ENSG00000131018|ENST00000367255|SYNE1;ENST00000461872.6_1_6:152697909-152949466:-|nuORF;nc|ENSG00000131018|Q8NF91-10|SYNE1;nc|ENSG00000131018|Q8NF91-4|SYNE1;nc|ENSG00000131018|Q8NF91-7|SYNE1;SYNE1|p.A3854Lfs*20|1|0.4|ENSG00000131018|chr6:152352048-152352048|T/-|frameshift_variant;SYNE1|p.E4738Kfs*25|1|0.12|ENSG00000131018|chr6:152330474-152330474|T/-|frameshift_variant;SYNE1|p.E5862Gfs*83|1|0.12|ENSG00000131018|chr6:152300729-152300738|CCAGACTCCT/-|frameshift_variant;SYNE1|p.G6773Wfs*7|1|0.44|ENSG00000131018|chr6:152236186-152236187|-/A|frameshift_variant;SYNE1|p.I2756*|1|0.12|ENSG00000131018|chr6:152387293-152387293|T/-|frameshift_variant;SYNE1|p.K3606Sfs*5|1|0.25|ENSG00000131018|chr6:152354768-152354768|T/-|frameshift_variant;SYNE1|p.K6871Rfs*22|2|0.52|ENSG00000131018|chr6:152233881-152233881|T/-|frameshift_variant;SYNE1|p.L8283Pfs*8|1|0.19|ENSG00000131018|chr6:152148173-152148174|-/G|frameshift_variant;SYNE1|p.M2832Nfs*53|1|0.25|ENSG00000131018|chr6:152385831-152385832|-/T|frameshift_variant;SYNE1|p.M5602Nfs*13|2|0.32|ENSG00000131018|chr6:152310779-152310780|-/T|frameshift_variant;SYNE1|p.N2333Kfs*2|1|0.32|ENSG00000131018|chr6:152401168-152401169|-/T|frameshift_variant;SYNE1|p.S2126Pfs*10|1|0.33|ENSG00000131018|chr6:152409564-152409564|A/-|frameshift_variant;SYNE1|p.V8635Sfs*12|1|0.15|ENSG00000131018|chr6:152133375-152133375|T/-|frameshift_variant	56.43379154798735	0.2433427591689151	5				NaN	NaN	0	NaN	8734	4532	13262
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13269	37.045	NaN	1100.2	30	0	82.629	0.139			+	43679	TKECSEKL	8	59	469.2349611644602	NaN	0	469.2351379394531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TKECSEKL_	REV__tr|U7SL97|U7SL97_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02024PE=4SV=1	66.42927471994793	1.7418937515398478	5				NaN	NaN	0	NaN	8735	4532	13262
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13283	37.085	NaN	2292.1	30	0	331.41	0.214	+			162	AAISLAFSK	9	54	454.26566983630687	906.5167867394138	2	454.2658386230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAISLAFSK_	ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A;TOP2A|p.K1199Efs*11|1|0.23|ENSG00000131747|chr17:40396408-40396409|-/C|frameshift_variant;TOP2A|p.T1205Hfs*19|4|0.35|ENSG00000131747|chr17:40396390-40396390|T/-|frameshift_variant	54.776311868738084	0.25715957988447635	5				NaN	NaN	0	NaN	8743	4538	13282
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13284	37.088	NaN	1228.7	30	0	135.19	0.106	+			51213	YPSKSILL	8	48	460.7763403876218	919.5381278420437	2	460.7764892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YPSKSILL_	ENSG00000168961|ENST00000395473|LGALS9;ENST00000486774.1_1_17:25972868-25974145:+|nuORF;ENST00000584386.5_1_17:25958291-25974145:+|nuORF;nc|ENSG00000168961|O00182-2|LGALS9;nc|ENSG00000168961|O00182-3|LGALS9;nc|ENSG00000168961|O00182-4|LGALS9;nc|ENSG00000168961|O00182-5|LGALS9;nc|ENSG00000168961|O00182-6|LGALS9	20.481830146152948	0.8005983782650069	5				NaN	NaN	0	NaN	8744	4538	13282
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13285	37.09	NaN	1574.7	30	0	160.71	0.035	+			18696	ITDFVELLG	9	60	503.7747610410262	NaN	0	503.7940368652344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ITDFVELLG_	ENSG00000146733|ENST00000275605|PSPH;ENST00000450062.1_1_7:55832495-55840978:+|nuORF;ENST00000459834.5_1_7:56079457-56101834:-|nuORF	45.9519527083369	0.2345902329052062	5				NaN	NaN	0	NaN	8745	4538	13282
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13291	37.105	NaN	3323.2	30	0	956.03	0.144	+			18927	IVNDFAYMK	9	71	550.7757593465773	1099.5369657599545	2	550.776123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IVNDFAYMK_	ENSG00000170348|ENST00000303575|TMED10;ENST00000534816.1_1_8:146220430-146220868:+|nuORF;ENST00000555036.1_1_14:75602424-75614456:-|nuORF;ENST00000555873.1_1_14:75601590-75605782:-|nuORF;ENST00000556969.5_1_14:75601590-75614465:-|nuORF	61.691277971877994	0.19951612995419254	5				NaN	NaN	0	NaN	8748	4541	13290
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13301	37.141	NaN	1588.7	30	0	202.06	0.214	+			10354	ETVGLKIL	8	52	436.77632549912846	871.5380980650569	2	436.77587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ETVGLKIL_	ENSG00000127603|ENST00000564288|MACF1;MACF1|p.A5223Lfs*8|1|0.21|ENSG00000127603|chr1:39388486-39388486|G/-|frameshift_variant;MACF1|p.N4824Kfs*19|1|0.33|ENSG00000127603|chr1:39387292-39387293|-/A|frameshift_variant;MACF1|p.S2157Ffs*3|1|0.37|ENSG00000127603|chr1:39333036-39333037|-/T|frameshift_variant;MACF1|p.T4896Lfs*29|1|0.27|ENSG00000127603|chr1:39387507-39387507|A/-|frameshift_variant;nc|ENSG00000127603|Q9UPN3-5|MACF1;nc|ENSG00000127603|Q9UPN3|MACF1	71.37791200682192	0.3954169775488141	5				NaN	NaN	0	NaN	8752	4547	13300
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13302	37.145	NaN	2126.6	30	0	187.85	0.038	+			10622	EYNKSWQTF	9	64	601.7767116634333	1201.5388703936665	2	601.77734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EYNKSWQTF_	ENSG00000198440|ENST00000333201|ZNF583	63.53385203322761	0.18415635464017938	5				NaN	NaN	0	NaN	8753	4547	13300
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13310	37.164	NaN	2000.2	30	0	527.51	0.214	+			2093	ALFDGVVSK	9	55	468.2638188466109	934.5130847600218	2	468.2629699707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ALFDGVVSK_	ENSG00000151806|ENST00000281543|GUF1;ENST00000506793.5_1_4:44680541-44700695:+|nuORF;GUF1|p.K645Sfs*2|5|0.23|ENSG00000151806|chr4:44698598-44698598|A/-|frameshift_variant	77.31757898189308	0.1091473830098891	5				NaN	NaN	0	NaN	8758	4550	13309
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13311	37.167	NaN	2385	30	0	295.78	0.036			+	-1	LTCLTELIK	9	57	545.8126516729374	1089.6107504126746	2	545.8135375976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LTC(Carbamidomethyl (C))LTELIK_	REV__ENSG00000158863|ENST00000289921|FHIP2B;REV__ENST00000488968.1_1_8:21953801-21954290:+|nuORF;REV__ENST00000498344.2_1_8:21946698-21954290:+|nuORF	64.20726635412375	0.17854274437659667	5				NaN	NaN	0	NaN	8759	4550	13309
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13317	37.183	NaN	2314.7	30	0	271.4	0.214	+			12726	GEKTISVVL	9	53	473.2846305529158	944.5547081726316	2	473.2845153808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEKTISVVL_	ENSG00000073050|ENST00000262887|XRCC1;ENST00000594511.1_1_19:44078923-44079610:-|nuORF;ENST00000595789.5_1_19:44056953-44079610:-|nuORF	67.49366992349736	0.1516260258713357	5				NaN	NaN	0	NaN	8762	4553	13316
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13318	37.187	NaN	1597.8	30	0	155.98	0.035			+	51163	YPATPTLLF	9	64	511.77993661321875	NaN	0	511.779541015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YPATPTLLF_	REV__ENST00000453571.5_1_11:47290775-47295429:+|nuORF	57.81127852772723	0.15865383123342353	5				NaN	NaN	0	NaN	8763	4553	13316
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13328	37.221	NaN	1754.9	30	0	237.93	0.214			+	26554	LTSKEGPKL	9	56	486.7895535806255	971.5645542280511	2	486.79083251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LTSKEGPKL_	REV__ENSG00000134982|ENST00000257430|APC;REV__nc|ENSG00000134982|P25054-2|APC;REV__nc|ENSG00000134982|P25054-3|APC	62.107414245175825	0.1960472003779324	5				NaN	NaN	0	NaN	8767	4559	13327
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13329	37.224	NaN	1967.2	30	0	350.73	0.035	+			41704	SVSDLFNTK	9	54	505.76125171507516	1009.5079504969503	2	505.7621765136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVSDLFNTK_	ENSG00000054654|ENST00000555002|SYNE2;ENST00000557005.1_1_14:64469755-64489638:+|nuORF;nc|ENSG00000054654|Q8WXH0|SYNE2;SYNE2|p.A5240Qfs*5|1|0.07|ENSG00000054654|chr14:64152639-64152639|G/-|frameshift_variant;SYNE2|p.D3074Ffs*8|1|0.07|ENSG00000054654|chr14:64053132-64053133|-/TTTCTTTTTCAAATACTTG|frameshift_variant;SYNE2|p.F2563Ifs*28|1|0.34|ENSG00000054654|chr14:64051593-64051594|-/A|frameshift_variant;SYNE2|p.F2840Lfs*3|1|0.38|ENSG00000054654|chr14:64052427-64052427|T/-|frameshift_variant;SYNE2|p.F4992Lfs*13|1|0.39|ENSG00000054654|chr14:64140067-64140067|T/-|frameshift_variant;SYNE2|p.L5308Ifs*18|1|0.12|ENSG00000054654|chr14:64158750-64158751|GG/-|frameshift_variant;SYNE2|p.S1830Kfs*9|1|0.34|ENSG00000054654|chr14:64021985-64021986|-/A|frameshift_variant;SYNE2|p.S6651Rfs*83|1|0.29|ENSG00000054654|chr14:64220596-64220597|-/G|frameshift_variant	35.15202426646627	0.4747332964206883	5				NaN	NaN	0	NaN	8768	4559	13327
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13342	37.26	NaN	5414.8	30	0	2984.7	0.144	+			31293	QIFNGTFVK	9	64	527.2898849729972	1052.5652170127944	2	527.2908325195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QIFNGTFVK_	ENSG00000147604|ENST00000352983|RPL7;ENST00000397636.2_1_7:99737498-99738123:-|nuORF;ENST00000461190.1_1_3:123871117-123871351:-|nuORF;ENST00000600588.1_1_19:6593418-6593715:+|nuORF	37.81151784470057	0.4459294069877048	5				NaN	NaN	0	NaN	8775	4565	13341
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13347	37.277	NaN	996.5	30	0	98.454	0.141			+	29950	PMVQNDGL	8	46	437.2106139105351	872.4066748878702	2	437.2108154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PMVQNDGL_	REV__ENSG00000183305|ENST00000682532|MAGEA2B;REV__ENSG00000268606|ENST00000684311|MAGEA2	50.0245360154114	0.5941082100236891	5				NaN	NaN	0	NaN	8777	4568	13346
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13353	37.296	NaN	2850.8	30	0	340.17	0.214	+			49272	VVQDGITLITK	11	71	593.8556753609123	1185.6967977886245	2	593.8563842773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVQDGITLITK_	ENSG00000079246|ENST00000392132|XRCC5	104.06999374311218	0.052272977646279854	5				NaN	NaN	0	NaN	8780	4571	13352
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13354	37.299	NaN	979.31	30	0	93.285	0.106	+			23780	LCLLAWAGL	9	46	480.27375565768114	NaN	0	480.27386474609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LCLLAWAGL_	CON__Q3SZH5;ENSG00000135744|ENST00000366667|AGT	39.021493756699265	0.2805557132942146	5				NaN	NaN	0	NaN	8781	4571	13352
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13355	37.301	NaN	530.31	30	0	107.39	0.033			+	50514	YANSTNGK	8	35	427.7056579589844	NaN	0	427.7056579589844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YANSTNGK_	REV__ENST00000400000.6_1_18:9955494-9955929:+|nuORF	20.481830146152948	1.741893751539848	5				NaN	NaN	0	NaN	8782	4571	13352
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13361	37.317	NaN	1731.5	30	0	116.85	0.144	+			37557	SLMHSFILK	9	71	538.3020839958058	1074.5896150584115	2	538.3021850585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLMHSFILK_	ENSG00000125971|ENST00000357156|DYNLRB1;ENST00000480759.1_1_20:33117938-33128425:+|nuORF	60.11826168202944	0.21262886028301267	5				NaN	NaN	0	NaN	8785	4574	13360
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13366	37.334	NaN	3615.1	30	0	553.69	0.214	+			35900	SEFKAMDSI	9	68	514.2417449583678	1026.4689369835355	2	514.241943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEFKAMDSI_	CTNNA1|p.L897I|1|0.68|ENSG00000044115|chr5:138934057-138934057|C/A|missense_variant;ENSG00000044115|ENST00000302763|CTNNA1;ENST00000522792.1_1_5:138268134-138269775:+|nuORF;nc|ENSG00000044115|P35221-2|CTNNA1;nc|ENSG00000044115|P35221-3|CTNNA1	90.60085204095205	0.06317133949006545	5				NaN	NaN	0	NaN	8787	4577	13365
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13367	37.338	NaN	1821.6	30	0	636.15	0.033	+			309	AAPLRLIAA	9	40	448.28980423423235	894.5650555352647	2	448.2896728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAPLRLIAA_	ENSG00000112159|ENST00000369393|MDN1;MDN1|p.D409Rfs*22|1|0.16|ENSG00000112159|chr6:89789788-89789789|-/G|frameshift_variant;MDN1|p.E2692*|2|0.32|ENSG00000112159|chr6:89706133-89706134|-/A|frameshift_variant;MDN1|p.F2691Lfs*7|2|0.37|ENSG00000112159|chr6:89706134-89706134|A/-|frameshift_variant;MDN1|p.K2642Nfs*17|2|0.29|ENSG00000112159|chr6:89707449-89707449|T/-|frameshift_variant;MDN1|p.L4077Cfs*15|1|0.16|ENSG00000112159|chr6:89680625-89680625|G/-|frameshift_variant;MDN1|p.L5278Ffs*6|1|0.18|ENSG00000112159|chr6:89652273-89652274|-/A|frameshift_variant;MDN1|p.N20D|1|0.19|ENSG00000112159|chr6:89819550-89819550|T/C|missense_variant	42.47446043378293	0.39123495718708534	5				NaN	NaN	0	NaN	8788	4577	13365
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13378	37.363	NaN	3815	30	0	1440.5	0.214	+			34171	RTAVLDFIE	9	62	532.2928058109056	1062.5710586886112	2	532.7940673828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTAVLDFIE_	ENSG00000168818|ENST00000306200|STX18;ENST00000512780.2_1_4:4459120-4543730:-|nuORF;ENST00000583091.1_1_17:28395652-28396225:+|nuORF	69.6276240434122	0.14239879520340665	5				NaN	NaN	0	NaN	8796	4580	13377
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13379	37.367	NaN	2138.7	30	0	228.77	0.035	+			41595	SVQGIIIYR	9	60	524.8109066172624	1047.6072603013247	2	524.8111572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVQGIIIYR_	ENSG00000005022|ENST00000317881|SLC25A5;ENSG00000151729|ENST00000281456|SLC25A4;ENSG00000169100|ENST00000381401|SLC25A6;ENST00000406156.2_1_6:121975405-121975696:+|nuORF;ENST00000435239.1_1_7:32511604-32512018:+|nuORF	77.31757898189308	0.1091473830098891	5				NaN	NaN	0	NaN	8797	4580	13377
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13385	37.383	NaN	1542.9	30	0	172.86	0.142	+			14020	GSFVSSLVK	9	52	462.26340577437367	NaN	0	462.2633056640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSFVSSLVK_	ENSG00000172016|ENST00000305165|REG3A	39.252832667884924	0.27938773122138094	5				NaN	NaN	0	NaN	8800	4583	13384
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13390	37.4	NaN	1730.1	30	0	317.52	0.214	+			18151	ILNQIQIL	8	51	477.8028103499626	953.5910677667252	2	477.80255126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ILNQIQIL_	ATRX|p.N1318Ifs*28|1|0.39|ENSG00000085224|chrX:77663549-77663549|T/-|frameshift_variant	50.0245360154114	0.5941082100236891	5				NaN	NaN	0	NaN	8802	4586	13389
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13391	37.403	NaN	3201.1	30	0	715.05	0.047				-1	 	0	56	605.3681762412466	1813.0826993239398	3	605.7028198242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8803	4586	13389
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13398	37.421	NaN	2406.5	30	0	296.95	0.145			+	-1	PIVCMVICLE	10	56	596.7920086112932	1191.5694642893864	2	596.7920532226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_PIVC(Carbamidomethyl (C))M(Oxidation (M))VICLE_	REV__ENSG00000141959|ENST00000349048|PFKL;REV__ENST00000397961.6_1_21:45725201-45746742:+|nuORF;REV__ENST00000460521.5_1_21:45741509-45746742:+|nuORF;REV__ENST00000466134.5_1_21:45739892-45745863:+|nuORF;REV__ENST00000467315.5_1_21:45739892-45746742:+|nuORF;REV__ENST00000474114.5_1_21:45741509-45744801:+|nuORF;REV__ENST00000495274.1_1_21:45742848-45745285:+|nuORF;REV__ENST00000498841.5_1_21:45739892-45744801:+|nuORF;REV__nc|ENSG00000141959|P17858-2|PFKL;REV__PFKL|p.P704Qfs*6|1|0.29|ENSG00000141959|chr21:44326177-44326177|C/-|frameshift_variant	24.20275056022122	0.6821818413321409	5				NaN	NaN	0	NaN	8807	4589	13397
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13407	37.445	NaN	1026.2	30	0	188.99	0.141			+	25744	LSAAAAMVL	9	47	423.74121680720936	NaN	0	423.7407531738281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSAAAAMVL_	REV__ENSG00000267221|ENST00000587304|C17orf113	57.81127852772723	0.15865383123342353	5				NaN	NaN	0	NaN	8813	4592	13406
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13412	37.462	NaN	1232.7	30	0	326	0.143	+			6888	CLMILYRL	8	47	512.7869948185516	1023.5594367039033	2	513.2874145507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CLMILYRL_	ENSG00000153233|ENST00000283228|PTPRR;ENST00000548220.1_1_12:71054984-71148538:-|nuORF;ENST00000551219.5_1_12:71092119-71148195:-|nuORF;nc|ENSG00000153233|Q15256-4|PTPRR;nc|ENSG00000153233|Q15256-5|PTPRR;PTPRR|p.N498Mfs*25|1|0.47|ENSG00000153233|chr12:70684131-70684131|T/-|frameshift_variant	29.841539824830324	0.7289191502596711	5				NaN	NaN	0	NaN	8815	4595	13411
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13420	37.483	NaN	2722.4	30	0	314.19	0.214	+			17637	IEKEGEFTL	9	69	533.2767246410056	1064.538896348811	2	533.2765502929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IEKEGEFTL_	ENSG00000169189|ENST00000361439|NSMCE1;ENST00000565070.5_1_16:27237776-27268891:-|nuORF;ENST00000569236.5_1_16:27236480-27252833:-|nuORF	72.87924865735499	0.12833875048249987	5				NaN	NaN	0	NaN	8820	4598	13419
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13421	37.487	NaN	1586.6	30	0	347.84	0.034			+	48310	VTELRQLL	8	48	486.29829899988727	NaN	0	486.298095703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTELRQLL_	REV__ENSG00000111325|ENST00000228922|OGFOD2;REV__ENST00000420319.6_1_12:123459798-123461705:+|nuORF;REV__ENST00000538628.5_1_12:123459581-123461705:+|nuORF;REV__ENST00000538755.5_1_12:123459581-123462595:+|nuORF;REV__ENST00000540866.2_1_12:123459879-123461705:+|nuORF;REV__ENST00000542037.1_1_12:123461107-123462595:+|nuORF;REV__ENST00000545612.5_1_12:123459581-123463082:+|nuORF;REV__nc|ENSG00000111325|Q6N063-2|OGFOD2	44.116797842482775	1.7418937515398478	5				NaN	NaN	0	NaN	8821	4598	13419
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13436	37.539	NaN	5613.6	30	0	758.57	0.214	+			49956	VYVVGTAHF	9	56	496.7637800887683	991.5130072443367	2	496.7642517089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYVVGTAHF_	ENSG00000170638|ENST00000380909|TRABD;ENST00000463233.1_1_22:50624392-50636456:+|nuORF;nc|ENSG00000170638|Q9H4I3-2|TRABD	114.5858319719848	0.024477364776774663	5				NaN	NaN	0	NaN	8827	4607	13435
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13437	37.543	NaN	3367.7	30	0	397.39	0.035			+	1845	AIKIDSPLY	9	67	510.2924960486587	1018.5704391641174	2	510.2923583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AIKIDSPLY_	REV__tr|U7T4W2|U7T4W2_FUSNUbeta-lactamaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00215PE=3SV=1	56.72105179125745	0.24094814563026265	5				NaN	NaN	0	NaN	8828	4607	13435
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13444	37.562	NaN	1189.2	30	0	223.57	0.143	+			48048	VSSDSVAKFA	10	52	505.76125171507516	1009.5079504969503	2	505.7613220214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSSDSVAKFA_	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42|TTN;TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant	52.936696900407355	0.4300801048568001	5				NaN	NaN	0	NaN	8832	4610	13443
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13453	37.596	NaN	1840.9	30	0	363.48	0.214			+	9102	EGKNGISAL	9	45	444.7432351366618	887.4719173401236	2	444.7428283691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EGKNGISAL_	REV__ENSG00000196418|ENST00000543802|ZNF124;REV__nc|ENSG00000196418|Q15973-4|ZNF124;REV__nc|ENSG00000196418|Q15973-5|ZNF124;REV__ZNF124|p.A214Dfs*12|1|0.07|ENSG00000196418|chr1:247156981-247156982|-/T|frameshift_variant	87.69643885390035	0.07135982304947239	5				NaN	NaN	0	NaN	8835	4616	13452
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13454	37.6	NaN	1303.6	30	0	88.678	0.106			+	47390	VPKKIIDY	8	57	488.29749618036504	974.5804394275301	2	488.29693603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VPKKIIDY_	REV__tr|U7T2K0|U7T2K0_FUSNULargeribosomalsubunitproteinuL23OS=FusobacteriumnucleatumCTI-5OX=1316586GN=rplWPE=3SV=1	27.882242232435846	0.7440473649773525	5				NaN	NaN	0	NaN	8836	4616	13452
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13455	37.602	NaN	1823.7	30	0	124.11	0.036	+			6164	AVQGISGLPLK	11	60	541.8322178431885	NaN	0	541.832275390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVQGISGLPLK_	ENSG00000167721|ENST00000301364|TSR1	42.42483347401837	0.3697264059685553	5				NaN	NaN	0	NaN	8837	4616	13452
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13462	37.62	NaN	2921.7	30	0	391.66	0.215	+			22966	KVQYVIQG	8	53	467.77163443426264	933.5287159353253	2	467.77099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVQYVIQG_	ENSG00000158019|ENST00000379624|BABAM2;nc|ENSG00000158019|Q9NXR7-1|BABAM2;nc|ENSG00000158019|Q9NXR7-3|BABAM2;nc|ENSG00000158019|Q9NXR7-4|BABAM2	60.29395666154354	0.49887135096048313	5				NaN	NaN	0	NaN	8841	4619	13461
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13463	37.623	NaN	2657.5	30	0	224	0.106	+			813	AEFVGVSHL	9	58	479.7536824566837	957.4928119801674	2	479.7535095214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEFVGVSHL_	ENSG00000141101|ENST00000268802|NOB1;ENST00000502915.1_1_4:139481866-139482694:+|nuORF	74.25504064058377	0.12238981753128622	5				NaN	NaN	0	NaN	8842	4619	13461
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13464	37.625	NaN	2567.6	30	0	468.32	0.106			+	20874	KINKIDEKL	9	64	550.837672398324	1099.660791863448	2	550.8384399414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KINKIDEKL_	REV__tr|U7SU03|U7SU03_FUSNUDisulfideisomeraseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01050PE=4SV=1	64.20726635412375	0.17854274437659667	5				NaN	NaN	0	NaN	8843	4619	13461
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13465	37.627	NaN	870.42	30	0	120.45	0.034	+			39864	STLPAITLK	9	52	472.2947135095472	NaN	0	472.295654296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STLPAITLK_	ENSG00000117984|ENST00000236671|CTSD	40.77816245573522	0.2702456086868081	5				NaN	NaN	0	NaN	8844	4619	13461
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13475	37.66	NaN	1764.6	30	0	241.67	0.141	+			30345	PTVHTVTM	8	50	443.22873355488525	884.4429141765705	2	443.22906494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PTVHTVTM_	ENSG00000158553|ENST00000444565|POM121L2	40.5726180659479	0.6527593143185008	5				NaN	NaN	0	NaN	8848	4625	13474
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13488	37.7	NaN	1721.3	30	0	181.92	0.214	+			16272	HEGDIILKI	9	57	519.3035044407169	1036.5924559482337	2	519.3037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HEGDIILKI_	ENSG00000119139|ENST00000377245|TJP2;nc|ENSG00000119139|Q9UDY2-2|TJP2;nc|ENSG00000119139|Q9UDY2-3|TJP2;nc|ENSG00000119139|Q9UDY2-4|TJP2;nc|ENSG00000119139|Q9UDY2-5|TJP2;nc|ENSG00000119139|Q9UDY2-6|TJP2;nc|ENSG00000119139|Q9UDY2-7|TJP2;TJP2|p.F813Sfs*12|1|0.23|ENSG00000119139|chr9:69240013-69240013|T/-|frameshift_variant;TJP2|p.P484Qfs*30|1|0.18|ENSG00000119139|chr9:69228107-69228107|C/-|frameshift_variant;TJP2|p.T849Rfs*12|1|0.32|ENSG00000119139|chr9:69240120-69240120|A/-|frameshift_variant	42.33807565288922	0.3928346960664841	5				NaN	NaN	0	NaN	8855	4631	13487
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13489	37.704	NaN	3012	30	0	1154	0.106	+			27731	MQLPPFDM	8	59	526.7263980443705	NaN	0	526.726318359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term),2 Oxidation (M)	_(Acetyl (Protein N-term))M(Oxidation (M))QLPPFDM(Oxidation (M))_	ENSG00000188425|ENST00000341294|NANOS2;NANOS2|p.L50Wfs*32|1|0.08|ENSG00000188425|chr19:45914547-45914547|C/-|frameshift_variant	55.50420428727701	1.7418937515398478	5				NaN	NaN	0	NaN	8856	4631	13487
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13490	37.706	NaN	1736.5	30	0	225.87	0.106			+	30533	QAIVLNIL	8	46	442.28405816257873	NaN	0	442.2845153808594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QAIVLNIL_	REV__ENSG00000115464|ENST00000398571|USP34;REV__USP34|p.K125Nfs*10|3|0.28|ENSG00000115464|chr2:61405885-61405885|T/-|frameshift_variant;REV__USP34|p.L2716Sfs*30|1|0.05|ENSG00000115464|chr2:61214596-61214597|-/AAGCTGA|frameshift_variant;REV__USP34|p.L3228*|1|0.22|ENSG00000115464|chr2:61190564-61190564|A/-|frameshift_variant;REV__USP34|p.N220Mfs*6|1|0.36|ENSG00000115464|chr2:61394947-61394947|T/-|frameshift_variant;REV__USP34|p.N788Kfs*4|1|0.42|ENSG00000115464|chr2:61343951-61343952|-/T|frameshift_variant;REV__USP34|p.N788Yfs*3|1|0.09|ENSG00000115464|chr2:61343952-61343953|TT/-|frameshift_variant	31.954861631926434	1.7418937515398478	5				NaN	NaN	0	NaN	8857	4631	13487
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13491	37.707	NaN	1566.1	30	0	263.93	0.106			+	13349	GKTAVTKFP	9	53	474.7795525457565	947.544552158313	2	474.7798767089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GKTAVTKFP_	REV__ANK3|p.K3778Nfs*26|1|0.37|ENSG00000151150|chr10:60069547-60069547|T/-|frameshift_variant;REV__ANK3|p.K4020Rfs*45|4|0.35|ENSG00000151150|chr10:60068822-60068822|T/-|frameshift_variant;REV__ANK3|p.K4140Nfs*15|2|0.27|ENSG00000151150|chr10:60064188-60064188|T/-|frameshift_variant;REV__ANK3|p.M3608Cfs*4|1|0.37|ENSG00000151150|chr10:60070059-60070059|T/-|frameshift_variant;REV__ANK3|p.S4352Vfs*2|1|0.51|ENSG00000151150|chr10:60055669-60055670|-/C|frameshift_variant;REV__ANK3|p.W4141Mfs*12|1|0.36|ENSG00000151150|chr10:60064187-60064188|-/T|frameshift_variant;REV__ENSG00000151150|ENST00000280772|ANK3	34.172542307311794	0.4838870758800184	5				NaN	NaN	0	NaN	8858	4631	13487
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13492	37.709	NaN	1109.2	30	0	105.41	0.106	+			24749	LHSMPSPQNL	10	52	562.2832641601562	NaN	0	562.2832641601562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LHSMPSPQNL_	ENST00000424774.1_1_1:16481746-16481983:+|nuORF	19.1035232394073	0.4201028297492154	5				NaN	NaN	0	NaN	8859	4631	13487
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13493	37.711	NaN	1228.9	30	0	114.9	0.036	+			11926	FVELQGEEI	9	55	532.271240234375	NaN	0	532.271240234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FVELQGEEI_	ENSG00000155561|ENST00000285968|NUP205;ENST00000607647.5_1_7:135285632-135291519:+|nuORF;NUP205|p.F1204Lfs*34|1|0.12|ENSG00000155561|chr7:135617163-135617163|T/-|frameshift_variant;NUP205|p.Q1211Kfs*27|1|0.25|ENSG00000155561|chr7:135617188-135617188|C/-|frameshift_variant	42.86426827375447	0.2558691296974908	5				NaN	NaN	0	NaN	8860	4631	13487
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13500	37.728	NaN	3918.5	30	0	568.43	0.214			+	43028	TEKVKELI	8	58	480.29232649176737	958.5701000503348	2	480.292236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEKVKELI_	REV__ENSG00000186472|ENST00000333891|PCLO;REV__nc|ENSG00000186472|Q9Y6V0-6|PCLO;REV__PCLO|p.E1944Sfs*8|1|0.34|ENSG00000186472|chr7:82955124-82955124|T/-|frameshift_variant;REV__PCLO|p.K2442Sfs*2|4|0.29|ENSG00000186472|chr7:82953628-82953628|T/-|frameshift_variant;REV__PCLO|p.K3621Ifs*26|1|0.04|ENSG00000186472|chr7:82949726-82949727|-/CCAGATA|frameshift_variant;REV__PCLO|p.K4306Gfs*8|1|0.04|ENSG00000186472|chr7:82915067-82915070|TTTT/-|frameshift_variant;REV__PCLO|p.M3036Tfs*24|1|0.06|ENSG00000186472|chr7:82951481-82951482|-/G|frameshift_variant;REV__PCLO|p.N4248Kfs*31|1|0.28|ENSG00000186472|chr7:82915242-82915243|-/T|frameshift_variant;REV__PCLO|p.P1234Afs*11|1|0.31|ENSG00000186472|chr7:82966089-82966090|-/T|frameshift_variant;REV__PCLO|p.P2408Lfs*36|1|0.44|ENSG00000186472|chr7:82953730-82953730|G/-|frameshift_variant;REV__PCLO|p.Q3062Tfs*25|1|0.2|ENSG00000186472|chr7:82951405-82951406|-/G|frameshift_variant;REV__PCLO|p.S1913Vfs*9|1|0.32|ENSG00000186472|chr7:82955216-82955216|T/-|frameshift_variant;REV__PCLO|p.T3933Nfs*47|1|0.06|ENSG00000186472|chr7:82916188-82916189|-/T|frameshift_variant;REV__PCLO|p.T5069Qfs*20|1|0.11|ENSG00000186472|chr7:82760722-82760722|T/-|frameshift_variant;REV__PCLO|p.V1883Ffs*29|1|0.09|ENSG00000186472|chr7:82955307-82955307|T/-|frameshift_variant;REV__PCLO|p.Y3007Lfs*2|1|0.28|ENSG00000186472|chr7:82951935-82951936|-/A|frameshift_variant	58.22992032128504	0.519305013932957	5				NaN	NaN	0	NaN	8864	4634	13499
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13501	37.731	NaN	3314.7	30	0	826.38	0.035	+			44788	TTQLSLSFK	9	60	512.7869948185516	1023.5594367039033	2	513.2886352539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTQLSLSFK_	ENSG00000198786|ENST00000361567|MT-ND5	63.53385203322761	0.18415635464017938	5				NaN	NaN	0	NaN	8865	4634	13499
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13509	37.749	NaN	6050.9	30	0	1156.3	0.214	+			35076	SAFGVIIEK	9	60	482.2790435796617	962.5435342261234	2	482.279541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAFGVIIEK_	ENSG00000178440|ENST00000651763|TIMM23B-AGAP6;ENSG00000204152|ENST00000651259|TIMM23B;ENSG00000265354|ENST00000580018|TIMM23;nc|ENSG00000204152|Q5SRD1-2|TIMM23B	85.86182877749512	0.07653218437724067	5				NaN	NaN	0	NaN	8870	4637	13508
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13510	37.753	NaN	1466.3	30	0	117.95	0.034	+			12641	GEIKGFTGI	9	54	461.25537697782784	920.4962010224557	2	461.2554626464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEIKGFTGI_	ENSG00000138801|ENST00000265174|PAPSS1;ENSG00000198682|ENST00000456849|PAPSS2;nc|ENSG00000198682|O95340|PAPSS2	58.22992032128504	0.22837015374068087	5				NaN	NaN	0	NaN	8871	4637	13508
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13518	37.773	NaN	1614.9	30	0	479.87	0.214			+	7605	DKARANLTI	9	50	501.29226924933647	1000.569985565473	2	501.2932434082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DKARANLTI_	REV__tr|U7SQR2|U7SQR2_FUSNUTetracenomycinpolyketidesynthesisO-methyltransferaseTcmPOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01759PE=4SV=1	32.75053402867276	0.49717649897795874	5				NaN	NaN	0	NaN	8876	4640	13517
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13519	37.777	NaN	1605.9	30	0	311.15	0.034	+			42407	TAKGFATVL	9	41	454.2658480794167	906.5171432256334	2	454.2657470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAKGFATVL_	ENSG00000198874|ENST00000359626|TYW1;nc|ENSG00000198874|Q9NV66-2|TYW1	30.503639358989545	0.5181749237905803	5				NaN	NaN	0	NaN	8877	4640	13517
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13525	37.793	NaN	1708.5	30	0	166.54	0.143	+			10221	ETGWSKPSK	9	54	510.26178138222417	NaN	0	510.26165771484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ETGWSKPSK_	ENSG00000147255|ENST00000361420|IGSF1;IGSF1|p.H803Tfs*4|1|0.66|ENSG00000147255|chrX:131277140-131277140|G/-|frameshift_variant;IGSF1|p.N277Mfs*10|1|0.37|ENSG00000147255|chrX:131283102-131283102|T/-|frameshift_variant;nc|ENSG00000147255|Q8N6C5-2|IGSF1;nc|ENSG00000147255|Q8N6C5-3|IGSF1;nc|ENSG00000147255|Q8N6C5-4|IGSF1	47.657333605630114	0.2228375344433429	5				NaN	NaN	0	NaN	8880	4643	13524
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13538	37.833	NaN	4810	30	0	718.82	0.212				-1	 	0	83	652.0263492431199	1953.0572183295594	3	652.025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8887	4649	13537
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13539	37.836	NaN	1856.1	30	0	153.68	0.038	+			49827	VYSRYFTTY	9	64	600.2902221571251	1198.56589138105	2	600.290283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	52.936696900407355	0.27249468807391813	5				NaN	NaN	0	NaN	8888	4649	13537
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13546	37.853	NaN	2500.8	30	0	389.43	0.143	+			7262	DALVITHY	8	48	466.247904091769	930.481255250338	2	466.2479553222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DALVITHY_	ENSG00000109917|ENST00000227322|ZPR1	82.30502934623384	0.30436709589983096	5				NaN	NaN	0	NaN	8892	4652	13545
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13551	37.869	NaN	2017.4	30	0	439.5	0.214	+			467	AAVPRAAFL	9	47	458.2739720755489	914.5333912178978	2	458.2740173339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAVPRAAFL_	ENSG00000089248|ENST00000261735|ERP29;ENST00000553161.1_1_12:112451251-112452397:+|nuORF;nc|ENSG00000089248|P30040-2|ERP29	38.80614096846853	0.43426287593479557	5				NaN	NaN	0	NaN	8894	4655	13550
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13552	37.873	NaN	2250.3	30	0	503.15	0.035	+			4205	ATFTNVFGK	9	54	492.760959905237	983.507366877274	2	492.7607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATFTNVFGK_	ENSG00000131503|ENST00000360839|ANKHD1;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	49.536043120802724	0.308405419312776	5				NaN	NaN	0	NaN	8895	4655	13550
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13560	37.893	NaN	2987.9	30	0	331.18	0.143	+			47275	VMTGSYNNF	9	59	516.7262713669596	1031.4379898007192	2	516.7260131835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VMTGSYNNF_	ABHD12-PPP2R2A|1|fusion;ENSG00000221914|ENST00000380737|PPP2R2A;ENST00000517754.1_1_8:26221160-26227926:+|nuORF;nc|ENSG00000221914|P63151-2|PPP2R2A	115.49404669440601	0.023927554121326553	5				NaN	NaN	0	NaN	8900	4658	13559
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13568	37.913	NaN	1045.6	30	0	184.29	0.214				-1	DALCVLPPL	9	52	499.27261597460017	NaN	0	499.272705078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_DALC(Carbamidomethyl (C))VLPPL_	sp|F5HIN9|TRX2_HCMVMTriplexcapsidprotein2OS=Humancytomegalovirus(strainMerlin)OX=295027GN=TRX2PE=3SV=1;sp|P16728|TRX2_HCMVATriplexcapsidprotein2OS=Humancytomegalovirus(strainAD169)OX=10360GN=TRX2PE=1SV=1	42.47446043378293	0.25855550551448697	5				NaN	NaN	0	NaN	8905	4661	13567
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13569	37.917	NaN	3199.6	30	0	492.44	0.036	+			249	AAMLDTVVFK	10	58	555.7968895868066	1109.5792262404132	2	556.2991943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_AAM(Oxidation (M))LDTVVFK_	ENSG00000115233|ENST00000409682|PSMD14;ENST00000477232.5_1_2:162241962-162267908:+|nuORF;ENST00000492908.1_1_2:162265323-162267908:+|nuORF	56.43379154798735	0.3982744522255666	5				NaN	NaN	0	NaN	8906	4661	13567
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13578	37.937	NaN	4496.7	30	0	391.43	0.214	+			30782	QDVLGIRQL	9	62	521.3060650085463	1040.5975770838925	2	521.3064575195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QDVLGIRQL_	ENSG00000056972|ENST00000368761|TRAF3IP2;ENST00000528599.1_1_6:111894079-111913289:-|nuORF;ENST00000532708.5_1_6:111888790-111922417:-|nuORF;nc|ENSG00000056972|O43734-5|TRAF3IP2;nc|ENSG00000056972|O43734|TRAF3IP2	109.47833844074708	0.029530294723441826	5				NaN	NaN	0	NaN	8912	4664	13577
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13579	37.941	NaN	1522.9	30	0	188.23	0.106	+			17378	IAMATVTAL	9	49	453.7521299508642	NaN	0	453.7520751953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_IAM(Oxidation (M))ATVTAL_	ENSG00000109107|ENST00000226253|ALDOC;ENSG00000149925|ENST00000642816|ALDOA;nc|ENSG00000149925|P04075|ALDOA	88.64286706044652	0.04433224405096462	5				NaN	NaN	0	NaN	8913	4664	13577
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13580	37.943	NaN	1620	30	0	134.43	0.037			+	-1	NGYALLQLCD	10	59	576.2747802734375	NaN	0	576.2747802734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))NGYALLQLCD_	REV__ENSG00000173801|ENST00000393931|JUP;REV__JUP|p.T289I|1|0.29|ENSG00000173801|chr17:41767422-41767422|G/A|missense_variant	30.317721548370564	0.4006274431774794	5				NaN	NaN	0	NaN	8914	4664	13577
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13591	37.966	NaN	1245.4	30	0	222.62	0.214	+			14452	GTAYGFFGK	9	52	474.2342526095748	NaN	0	474.2346496582031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTAYGFFGK_	ENST00000580048.1_1_18:72264114-72264453:-|nuORF	47.657333605630114	0.2228375344433429	5				NaN	NaN	0	NaN	8922	4667	13590
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13592	37.97	NaN	958.55	30	0	82.473	0.106			+	31194	QGQANTLLQ	9	49	486.7610362644133	NaN	0	486.7611389160156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QGQANTLLQ_	REV__ENSG00000106536|ENST00000518318|POU6F2;REV__nc|ENSG00000106536|P78424-2|POU6F2;REV__nc|ENSG00000106536|P78424|POU6F2	32.81241826257853	0.3119040447479903	5				NaN	NaN	0	NaN	8923	4667	13590
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13593	37.972	NaN	960.03	30	0	84.063	0.033			+	5924	AVLFEVVL	8	43	445.2745666503906	NaN	0	445.2745666503906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVLFEVVL_	REV__ENSG00000244165|ENST00000321826|P2RY11	37.028477286268924	1.7418937515398478	5				NaN	NaN	0	NaN	8924	4667	13590
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13602	38.003	NaN	804.71	30	0	56.838	0.214	+			10709	FAALHGPAL	9	32	448.75267669803833	NaN	0	448.7521667480469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FAALHGPAL_	ENSG00000100304|ENST00000216129|TTLL12	49.21078951299608	0.21213183292994464	5				NaN	NaN	0	NaN	8927	4673	13601
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13603	38.006	NaN	1847.9	30	0	217.52	0.035	+			38553	SSFELIVQK	9	62	525.7949841503048	1049.5754153674095	2	525.7949829101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSFELIVQK_	ENSG00000108424|ENST00000290158|KPNB1;nc|ENSG00000108424|Q14974-2|KPNB1	52.936696900407355	0.27249468807391813	5				NaN	NaN	0	NaN	8928	4673	13601
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13614	38.04	NaN	1570.2	30	0	228.18	0.142	+			222	AALSYVLCK	9	53	484.26792379480844	966.5212946564169	2	484.2666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AALSYVLCK_	ENSG00000161921|ENST00000293778|CXCL16	42.396135135203025	0.392153681582562	5				NaN	NaN	0	NaN	8933	4679	13613
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13620	38.059	NaN	1956.9	30	0	336.25	0.143	+			27482	MLVGVLVMVG	10	57	509.29526886866586	1016.5759848041317	2	509.29461669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MLVGVLVMVG_	ENSG00000240053|ENST00000375864|LY6G5B	44.53106598305862	0.5073935772121767	5				NaN	NaN	0	NaN	8936	4682	13619
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13625	38.076	NaN	1882.1	30	0	177.35	0.214	+			31278	QIAITVPKT	9	57	485.8005036450602	NaN	0	485.80029296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QIAITVPKT_	EIF4G3|p.A945Qfs*16|1|0.25|ENSG00000075151|chr1:20864482-20864482|T/-|frameshift_variant;EIF4G3|p.F1258Lfs*2|1|0.43|ENSG00000075151|chr1:20840975-20840975|A/-|frameshift_variant;EIF4G3|p.I1064Nfs*6|1|0.32|ENSG00000075151|chr1:20855052-20855053|-/T|frameshift_variant;EIF4G3|p.V564*|2|0.22|ENSG00000075151|chr1:20899839-20899839|T/-|frameshift_variant;ENSG00000075151|ENST00000602326|EIF4G3;ENST00000374933.3_1_1:21219982-21267875:-|nuORF;nc|ENSG00000075151|O43432-3|EIF4G3;nc|ENSG00000075151|O43432-4|EIF4G3;nc|ENSG00000075151|O43432|EIF4G3	49.536043120802724	0.20989033510253738	5				NaN	NaN	0	NaN	8938	4685	13624
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13626	38.079	NaN	1492.3	30	0	163.45	0.034			+	48116	VSVALVIQL	9	43	471.30522935849655	940.5959057837931	2	471.3044128417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSVALVIQL_	REV__nc|ENSG00000188580|Q5VXU1-2|NKAIN2	37.15910966729921	0.4535818937225704	5				NaN	NaN	0	NaN	8939	4685	13624
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13636	38.111	NaN	1583.7	30	0	216.48	0.214			+	19124	IYLRSGDL	8	54	468.7614616017313	935.5083702702626	2	468.76129150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IYLRSGDL_	REV__ENSG00000168676|ENST00000304372|KCTD19;REV__KCTD19|p.V768Rfs*12|1|0.33|ENSG00000168676|chr16:67291754-67291755|-/G|frameshift_variant;REV__KCTD19|p.V768Wfs*38|2|0.36|ENSG00000168676|chr16:67291755-67291755|G/-|frameshift_variant	47.91560031466742	0.6071945918984287	5				NaN	NaN	0	NaN	8943	4691	13635
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13637	38.115	NaN	1769.7	30	0	328.05	0.036			+	17056	HQRIFSTY	8	58	526.2692939417991	1050.5240349503981	2	526.2701416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HQRIFSTY_	REV__ENSG00000124422|ENST00000261497|USP22;REV__nc|ENSG00000124422|Q9UPT9-2|USP22	38.80614096846853	0.6637206697844082	5				NaN	NaN	0	NaN	8944	4691	13635
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13648	38.147	NaN	1616.5	30	0	208.65	0.143			+	3160	ASILYVASR	9	53	490.2824495354617	NaN	0	490.2819519042969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASILYVASR_	REV__ENST00000610170.1_1_22:34318437-34318572:+|nuORF	37.81151784470057	0.28666463014928195	5				NaN	NaN	0	NaN	8949	4697	13647
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13657	38.17	NaN	2225.6	30	0	217.27	0.144	+			40860	SVFEDPVISK	10	66	560.7983132211182	1119.5820735090363	2	560.7984619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVFEDPVISK_	ENSG00000125445|ENST00000245539|MRPS7;MRPS7|p.L162Pfs*29|1|0.05|ENSG00000125445|chr17:75263482-75263483|-/C|frameshift_variant	63.53385203322761	0.33370026130094593	5				NaN	NaN	0	NaN	8955	4700	13656
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13661	38.186	NaN	3654.7	30	0	264.41	0.214	+			49828	VYSRYFTTY	9	73	600.2902221571251	1198.56589138105	2	600.7930297851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	87.69643885390035	0.07135982304947239	5				NaN	NaN	0	NaN	8956	4703	13660
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13662	38.189	NaN	2696.2	30	0	544.61	0.106	+			15206	GTSSLFIYK	9	57	508.27702590365254	1014.5394988741051	2	508.2768859863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTSSLFIYK_	BBS10|p.K620Nfs*12|1|0.5|ENSG00000179941|chr12:76346125-76346125|T/-|frameshift_variant;ENSG00000179941|ENST00000650064|BBS10	39.252832667884924	0.4290233611298554	5				NaN	NaN	0	NaN	8957	4703	13660
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13663	38.191	NaN	1419.6	30	0	128.4	0.035			+	24468	LGGGAERSIQ	10	51	494.2664286380769	NaN	0	494.2657165527344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LGGGAERSIQ_	REV__GRM6|p.V243Gfs*40|1|0.4|ENSG00000113262|chr5:178991553-178991554|-/C|frameshift_variant	51.19269402634007	0.2980620950593832	5				NaN	NaN	0	NaN	8958	4703	13660
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13670	38.209	NaN	1742.3	30	0	323.87	0.214	+			28398	NENSNIQVL	9	63	515.7620795202145	1029.5096061072288	2	515.7618408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NENSNIQVL_	ENSG00000145216|ENST00000337488|FIP1L1;ENST00000505125.5_1_4:54245288-54325613:+|nuORF;ENST00000513008.5_1_4:54292015-54325613:+|nuORF;ENST00000513975.5_1_4:54244032-54306933:+|nuORF;FIP1L1|p.A332E|1|0.06|ENSG00000145216|chr4:53425943-53425943|C/A|missense_variant;FIP1L1|p.D472Efs*3|1|0.45|ENSG00000145216|chr4:53453049-53453050|-/G|frameshift_variant;FIP1L1|p.R473Lfs*2|1|0.5|ENSG00000145216|chr4:53453051-53453052|-/T|frameshift_variant;nc|ENSG00000145216|Q6UN15-3|FIP1L1;nc|ENSG00000145216|Q6UN15-4|FIP1L1;nc|ENSG00000145216|Q6UN15-5|FIP1L1	72.87924865735499	0.12833875048249987	5				NaN	NaN	0	NaN	8962	4706	13669
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13671	38.213	NaN	1261.2	30	0	72.35	0.036	+			28105	NAFKEITTM	9	56	527.7662144943599	NaN	0	527.765869140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NAFKEITTM_	ENSG00000137947|ENST00000370500|GTF2B;ENST00000486078.1_1_1:89325774-89329699:-|nuORF;ENST00000494819.5_1_1:89324456-89357188:-|nuORF	47.657333605630114	0.2228375344433429	5				NaN	NaN	0	NaN	8963	4706	13669
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13681	38.248	NaN	2504.3	30	0	500.86	0.214	+			44326	TSFSEALLK	9	58	498.27380012290143	994.5330473126029	2	498.2743835449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSFSEALLK_	ENSG00000143621|ENST00000361891|ILF2	112.41091882917199	0.026537921851008135	5				NaN	NaN	0	NaN	8967	4712	13680
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13682	38.251	NaN	1835.3	30	0	357.8	0.106	+			19077	IYIAGHPAF	9	52	494.76617800617197	987.517803079144	2	494.7671203613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IYIAGHPAF_	ENSG00000104824|ENST00000221419|HNRNPL;ENST00000568980.1_1_15:34781792-34782686:-|nuORF;HNRNPL|p.P337Hfs*58|9|0.35|ENSG00000104824|chr19:38840319-38840319|G/-|frameshift_variant;HNRNPL|p.P338Tfs*56|1|0.23|ENSG00000104824|chr19:38840318-38840319|-/G|frameshift_variant;nc|ENSG00000104824|P14866-2|HNRNPL	72.61992398637584	0.12946007194610515	5				NaN	NaN	0	NaN	8968	4712	13680
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13683	38.253	NaN	1444.1	30	0	294.11	0.033	+			37696	SLSLPHYG	8	44	437.227102518782	872.439652104364	2	437.2271423339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLSLPHYG_	ENSG00000100146|ENST00000396884|SOX10;nc|ENSG00000100146|P56693|SOX10	28.2542754592877	0.7411748056684583	5				NaN	NaN	0	NaN	8969	4712	13680
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13691	38.272	NaN	7558.4	30	0	1128.3	0.142	+			3220	ASLADIMAK	9	68	460.2492581827108	918.4839634322216	2	460.2497863769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASLADIMAK_	ENSG00000114391|ENST00000394077|RPL24;ENST00000446071.1_1_9:72832122-72832404:+|nuORF	136.26810882979174	0.012230845423532208	5				NaN	NaN	0	NaN	8974	4715	13690
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13697	38.29	NaN	1741.8	30	0	413.41	0.214	+			3285	ASLPTHLIT	9	47	476.7767136570256	951.5388743808512	2	476.776611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASLPTHLIT_	ENSG00000069943|ENST00000164305|PIGB	37.15910966729921	0.4535818937225704	5				NaN	NaN	0	NaN	8977	4718	13696
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13698	38.294	NaN	1749.4	30	0	510.42	0.106	+			39592	STGSIFSLK	9	53	470.26072801785955	938.5069031025191	2	470.2605895996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STGSIFSLK_	ENST00000370339.7_1_20:61834750-61835101:-|nuORF;nc|ENSG00000149658|Q9BYJ9-2|YTHDF1	36.446750945000026	0.4619375763483977	5				NaN	NaN	0	NaN	8978	4718	13696
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13699	38.295	NaN	1530.2	30	0	500.18	0.035	+			12241	GASLADIMAK	10	53	488.7601482966114	975.5057436600229	2	488.7599792480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GASLADIMAK_	ENSG00000114391|ENST00000394077|RPL24;ENST00000446071.1_1_9:72832122-72832404:+|nuORF	70.8162118820467	0.27065172005956	5				NaN	NaN	0	NaN	8979	4718	13696
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13706	38.313	NaN	5263.8	30	0	2776.2	0.154				-1	 	0	62	610.979008668602	1829.9151966060058	3	611.3134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8983	4721	13705
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13712	38.33	NaN	5033.2	30	0	2550.1	0.213				-1	 	0	54	610.979008668602	1829.9151966060058	3	610.9791259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8986	4724	13711
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13713	38.334	NaN	2101.3	30	0	165.66	0.036	+			11258	FIMDRAQAL	9	61	532.7810719028514	1063.5475908725027	2	532.7810668945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FIMDRAQAL_	ENSG00000105576|ENST00000425528|TNPO2;ENST00000588484.1_1_19:12826020-12830096:-|nuORF;nc|ENSG00000105576|O14787-2|TNPO2;TNPO2|p.H347Pfs*4|1|0.35|ENSG00000105576|chr19:12711373-12711374|-/G|frameshift_variant	52.936696900407355	0.27249468807391813	5				NaN	NaN	0	NaN	8987	4724	13711
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13720	38.352	NaN	2800	30	0	224.67	0.215	+			11945	FVIETARQL	9	67	538.809020037293	1075.6034871413858	2	538.8091430664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FVIETARQL_	ENSG00000119669|ENST00000238647|IRF2BPL;ENSG00000168264|ENST00000366609|IRF2BP2;IRF2BP2|p.K554Nfs*26|1|0.21|ENSG00000168264|chr1:234607239-234607239|T/-|frameshift_variant;IRF2BPL|p.G195Afs*17|1|0.33|ENSG00000119669|chr14:77027209-77027209|C/-|frameshift_variant;IRF2BPL|p.G244Vfs*101|1|0.32|ENSG00000119669|chr14:77027062-77027062|C/-|frameshift_variant;IRF2BPL|p.L713Sfs*54|1|0.54|ENSG00000119669|chr14:77025656-77025656|G/-|frameshift_variant;nc|ENSG00000168264|Q7Z5L9-2|IRF2BP2	89.02883481214508	0.06760336634167786	5				NaN	NaN	0	NaN	8991	4727	13719
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13721	38.356	NaN	1287.4	30	0	214.95	0.034	+			26426	LTGGGGEREA	10	47	473.73482369194744	NaN	0	473.73455810546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LTGGGGEREA_	ENST00000262662.5_1_1:51434219-51434396:+|nuORF	51.19269402634007	0.2980620950593832	5				NaN	NaN	0	NaN	8992	4727	13719
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13728	38.372	NaN	1767.7	30	0	87.755	0.145			+	24833	LITTKQMCN	9	57	562.7741432225872	1123.5337335119743	2	563.27734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_LITTKQM(Oxidation (M))C(Carbamidomethyl (C))N_	REV__ENST00000326132.10_1_22:31601541-31601643:+|nuORF	40.77816245573522	0.41113185337114944	5				NaN	NaN	0	NaN	8996	4730	13727
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13733	38.388	NaN	4196.7	30	0	680.68	0.214	+			10625	EYNNNFHVL	9	70	575.270195417838	1148.5258379024758	2	575.2701416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EYNNNFHVL_	ENSG00000151151|ENST00000373935|IPMK;ENST00000425988.1_1_13:23411483-23411888:-|nuORF	129.68262048586715	0.015338143639892752	5				NaN	NaN	0	NaN	8998	4733	13732
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13734	38.392	NaN	2299.7	30	0	174.77	0.106	+			46254	VEFNGKLLA	9	56	495.78489703668066	989.5552411401613	2	495.78466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VEFNGKLLA_	ENSG00000167986|ENST00000301764|DDB1;nc|ENSG00000167986|Q16531-2|DDB1	83.6470233535746	0.08277643980271215	5				NaN	NaN	0	NaN	8999	4733	13732
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13735	38.394	NaN	1174.6	30	0	101.57	0.106	+			14277	GSVELPIVGK	10	43	499.7977801650646	997.5810073969292	2	499.7978210449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GSVELPIVGK_	ENSG00000240849|ENST00000371652|PEDS1;ENST00000453505.6_1_20:48741597-48767785:-|nuORF	35.15202426646627	0.5927656479315102	5				NaN	NaN	0	NaN	9000	4733	13732
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13736	38.396	NaN	2084.8	30	0	207.71	0.035	+			8394	EANKAIIEY	9	63	525.7778741166601	NaN	0	525.779052734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EANKAIIEY_	tr|U7SZN4|U7SZN4_FUSNUIsoleucine--tRNAligaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=ileSPE=3SV=1	47.95952297671804	0.22075498469600283	5				NaN	NaN	0	NaN	9001	4733	13732
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13743	38.412	NaN	2059.4	30	0	628.81	0.214	+			26458	LTIIKTEK	8	56	473.3028187025512	944.5910844719024	2	473.30267333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LTIIKTEK_	nc|ENSG00000134954|P14921-2|ETS1;nc|ENSG00000134954|P14921-4|ETS1;nc|ENSG00000134954|P14921-5|ETS1;nc|ENSG00000134954|P14921|ETS1	30.503639358989545	0.7238069182250283	5				NaN	NaN	0	NaN	9005	4736	13742
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13744	38.416	NaN	577.69	30	0	112.97	0.106	+			1745	AHWLLEALV	9	27	351.2014465332031	NaN	0	351.2014465332031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AHWLLEALV_	ENST00000584377.5_1_17:80211530-80212190:-|nuORF	29.14955571784316	0.3303970763161698	5				NaN	NaN	0	NaN	9006	4736	13742
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13745	38.418	NaN	1496.3	30	0	331.05	0.035			+	8026	DTRGLFSVF	9	56	521.2724725222054	NaN	0	521.2734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DTRGLFSVF_	REV__ENSG00000182481|ENST00000330459|KPNA2	30.503639358989545	0.3235605894931338	5				NaN	NaN	0	NaN	9007	4736	13742
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13750	38.432	NaN	2908.8	30	0	548.1	0.214	+			12573	GEGRVGIIL	9	50	457.27660663499586	912.5386603367917	2	457.27703857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEGRVGIIL_	CFTR|p.G1208Afs*3|1|0.3|ENSG00000001626|chr7:117627672-117627672|G/-|frameshift_variant;CFTR|p.L1258Ffs*7|1|0.26|ENSG00000001626|chr7:117642487-117642488|-/T|frameshift_variant;CFTR|p.S1297Lfs*31|1|0.28|ENSG00000001626|chr7:117652852-117652852|T/-|frameshift_variant;ENSG00000001626|ENST00000003084|CFTR;nc|ENSG00000001626|P13569-2|CFTR	45.97224482568171	0.3502073465782774	5				NaN	NaN	0	NaN	9009	4739	13749
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13751	38.436	NaN	2731.9	30	0	231.89	0.036	+			14117	GSLNWVPVTK	10	65	550.8085245793487	1099.6024962254974	2	550.8095092773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSLNWVPVTK_	ENSG00000196188|ENST00000358184|CTSE;nc|ENSG00000196188|P14091-2|CTSE;nc|ENSG00000196188|P14091-3|CTSE	65.69465075029274	0.3140480584506322	5				NaN	NaN	0	NaN	9010	4739	13749
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13759	38.456	NaN	2831	30	0	715.74	0.214			+	-1	MALARLCGKTA	11	56	596.3211143746224	1190.6276758160448	2	596.3219604492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_MALARLC(Carbamidomethyl (C))GKTA_	REV__ENSG00000055118|ENST00000262186|KCNH2;REV__ENST00000461280.1_1_7:150646989-150652738:-|nuORF;REV__ENST00000473610.5_1_7:150646989-150648224:-|nuORF;REV__nc|ENSG00000055118|Q12809-2|KCNH2;REV__nc|ENSG00000055118|Q12809-4|KCNH2;REV__nc|ENSG00000055118|Q12809-5|KCNH2;REV__nc|ENSG00000055118|Q12809-6|KCNH2;REV__nc|ENSG00000055118|Q12809-7|KCNH2	23.52269567125451	0.7430573033454468	5				NaN	NaN	0	NaN	9015	4742	13758
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13760	38.459	NaN	2806.8	30	0	511.72	0.049				-1	 	0	60	749.03922042678	2244.09583188054	3	749.0397338867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9016	4742	13758
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13767	38.478	NaN	1620.6	30	0	355.7	0.214	+			11075	FETFNTPA	8	43	463.7160242099827	925.4174954867655	2	463.71624755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FETFNTPA_	ACTB|p.M132T|1|0.15|ENSG00000075624|chr7:5528688-5528688|A/G|missense_variant;ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196604|ENST00000409914|POTEF;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000403258.1_1_6:88986231-88986483:-|nuORF;ENST00000415776.1_1_Y:19869357-19869702:-|nuORF;ENST00000418987.2_1_9:103493819-103494230:+|nuORF;ENST00000428275.1_1_X:53172669-53172729:-|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000570019.1_1_15:34666200-34666557:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENST00000587663.1_1_18:60109485-60109668:+|nuORF;nc|ENSG00000204434|Q9BYX7|POTEKP	58.78195531508484	0.5138399468736706	5				NaN	NaN	0	NaN	9020	4745	13766
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13768	38.481	NaN	1697.2	30	0	300.21	0.036	+			46609	VFSYGLQPY	9	58	537.2690803549496	1072.523607776699	2	537.2694702148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VFSYGLQPY_	ENSG00000169071|ENST00000375708|ROR2	37.15910966729921	0.4535818937225704	5				NaN	NaN	0	NaN	9021	4745	13766
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13772	38.496	NaN	1316.4	30	0	130.6	0.214	+			44523	TSVGYAIFK	9	56	493.2711683960509	984.5277838589018	2	493.2718811035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSVGYAIFK_	ENSG00000055044|ENST00000264279|NOP58;ENST00000467734.5_1_2:203130664-203142690:+|nuORF;ENST00000472050.5_1_2:203130664-203149064:+|nuORF;ENST00000488403.5_1_2:203130664-203149205:+|nuORF;ENST00000492740.5_1_2:203130664-203139913:+|nuORF	35.61828744233558	0.47037581924408073	5				NaN	NaN	0	NaN	9022	4748	13771
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13773	38.5	NaN	1338.6	30	0	65.109	0.034	+			23395	LAAGLGYGLL	10	58	474.2816045279214	NaN	0	474.2816467285156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LAAGLGYGLL_	ADCY8|p.T500Sfs*10|1|0.44|ENSG00000155897|chr8:130909849-130909850|-/TCCTTGAC|frameshift_variant;ENSG00000155897|ENST00000286355|ADCY8	35.200714571348534	0.3845941098745963	5				NaN	NaN	0	NaN	9023	4748	13771
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13787	38.538	NaN	2307.8	30	0	241.22	0.214	+			28957	NSDPNLHLL	9	64	511.7673095793605	1021.520066225521	2	511.7671813964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NSDPNLHLL_	ENSG00000136830|ENST00000373312|NIBAN2;nc|ENSG00000136830|Q96TA1-2|NIBAN2	52.936696900407355	0.27249468807391813	5				NaN	NaN	0	NaN	9031	4754	13786
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13788	38.541	NaN	1972.1	30	0	99.363	0.106	+			49829	VYSRYFTTY	9	69	600.2902221571251	1198.56589138105	2	600.7914428710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	36.446750945000026	0.4619375763483977	5				NaN	NaN	0	NaN	9032	4754	13786
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13789	38.543	NaN	1953.1	30	0	224.95	0.034			+	-1	ALALFHIC	8	52	472.7554050722662	943.4962572113325	2	472.7552185058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_ALALFHIC(Carbamidomethyl (C))_	REV__ENSG00000125505|ENST00000245615|MBOAT7;REV__ENST00000494142.1_1_19:54677740-54682918:-|nuORF;REV__nc|ENSG00000125505|Q96N66-2|MBOAT7	54.89457262308372	0.5523244765420926	5				NaN	NaN	0	NaN	9033	4754	13786
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13802	38.593	NaN	1025	30	0	90.382	0.214				-1	KPMVILPF	8	45	480.78081596871107	NaN	0	480.78076171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_KPM(Oxidation (M))VILPF_	ENSG00000153208|ENST00000295408|MERTK	33.51558372728122	1.7418937515398478	5				NaN	NaN	0	NaN	9037	4763	13801
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13803	38.597	NaN	1622.1	30	0	102.13	0.106			+	32577	QWTRWSWRRSR	11	56	535.6162719726562	NaN	0	535.6162719726562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QWTRWSWRRSR_	REV__ENST00000322354.3_2_19:40947971-40950195:-|nuORF	9.21180021271957	0.456735970842152	5				NaN	NaN	0	NaN	9038	4763	13801
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13804	38.599	NaN	2275.6	30	0	507.57	0.106				-1	VKQSHRGKC	9	54	550.2929610254115	1098.571369117623	2	550.29296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_VKQSHRGKC(Carbamidomethyl (C))_	ENST00000372674.5_1_X:102564842-102565857:-|nuORF;ENST00000372677.7_1_X:102564842-102565956:-|nuORF;ENST00000449185.1_2_X:102564842-102565604:-|nuORF;ENST00000536889.1_1_X:102564842-102565604:-|nuORF	29.14955571784316	0.5308295550522326	5				NaN	NaN	0	NaN	9039	4763	13801
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13805	38.6	NaN	1191.5	30	0	149.09	0.035	+			38315	SRDHLYLP	8	54	500.7640380859375	NaN	0	500.7640380859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SRDHLYLP_	ENSG00000072736|ENST00000346183|NFATC3;ENST00000379165.8_1_16:68119584-68225707:+|nuORF;ENST00000553077.5_1_16:68118971-68225707:+|nuORF;ENST00000563288.5_1_16:68120670-68248329:+|nuORF;ENST00000563319.5_1_16:68118971-68248329:+|nuORF;ENST00000569766.5_1_16:68118971-68260371:+|nuORF;nc|ENSG00000072736|Q12968-2|NFATC3;nc|ENSG00000072736|Q12968-3|NFATC3;nc|ENSG00000072736|Q12968-4|NFATC3;nc|ENSG00000072736|Q12968-5|NFATC3;nc|ENSG00000072736|Q12968-6|NFATC3;NFATC3|p.G218Afs*38|1|0.32|ENSG00000072736|chr16:68122532-68122532|G/-|frameshift_variant;NFATC3|p.L634Sfs*2|1|0.27|ENSG00000072736|chr16:68174493-68174494|-/T|frameshift_variant	47.91560031466742	1.7418937515398478	5				NaN	NaN	0	NaN	9040	4763	13801
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13815	38.635	NaN	1738.1	30	0	94.412	0.143			+	37016	SIQLFQIY	8	60	506.27959151369015	NaN	0	506.2795104980469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIQLFQIY_	REV__ENSG00000109686|ENST00000604030|SH3D19;REV__ENST00000478503.6_1_4:152043245-152086876:-|nuORF;REV__LRBA-SH3D19|1|fusion;REV__LRBA-SH3D19|2|fusion;REV__LRBA-SH3D19|3|fusion;REV__LRBA-SH3D19|4|fusion;REV__nc|ENSG00000109686|Q5HYK7-2|SH3D19;REV__nc|ENSG00000109686|Q5HYK7-3|SH3D19;REV__nc|ENSG00000109686|Q5HYK7-4|SH3D19;REV__nc|ENSG00000109686|Q5HYK7-5|SH3D19;REV__nc|ENSG00000109686|Q5HYK7|SH3D19	55.50420428727701	1.7418937515398478	5				NaN	NaN	0	NaN	9044	4769	13814
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13831	38.703	NaN	2237.2	30	0	333.25	0.214	+			47409	VPNKVIQCF	9	68	524.2869512721625	1046.5593496111248	2	524.7888793945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VPNKVIQCF_	CLTC|p.A1374*|1|0.05|ENSG00000141367|chr17:59683464-59683465|-/TA|frameshift_variant;CLTC|p.D632Yfs*7|1|0.15|ENSG00000141367|chr17:59666589-59666590|-/TTACA|frameshift_variant;ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000141367|Q00610-2|CLTC	60.11826168202944	0.21262886028301267	5				NaN	NaN	0	NaN	9048	4781	13830
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13832	38.706	NaN	2071.2	30	0	438.42	0.106	+			3096	ASGGIFVLK	9	56	446.2689095458467	890.5232661584935	2	446.7698669433594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASGGIFVLK_	ENSG00000030066|ENST00000378460|NUP160;ENST00000526870.1_3_11:47861380-47861614:-|nuORF;nc|ENSG00000030066|Q12769|NUP160	82.24051045832904	0.08786059719216216	5				NaN	NaN	0	NaN	9049	4781	13830
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13833	38.708	NaN	1505.8	30	0	94.644	0.038	+			49830	VYSRYFTTY	9	64	600.2903877400656	1198.5662225469312	2	600.791748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	65.15724298150197	0.17062369902793603	5				NaN	NaN	0	NaN	9050	4781	13830
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13842	38.728	NaN	2120	30	0	808.04	0.142	+			5743	AVGATAVYPI	10	53	481.27161519131727	960.5286774494346	2	481.77325439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVGATAVYPI_	ENSG00000004864|ENST00000265631|SLC25A13;ENSG00000115840|ENST00000422440|SLC25A12;ENST00000484495.5_1_7:95799231-95818686:-|nuORF;nc|ENSG00000004864|Q9UJS0-2|SLC25A13;nc|ENSG00000115840|O75746-2|SLC25A12;SLC25A12|p.N371Tfs*22|1|0.38|ENSG00000115840|chr2:171813398-171813398|T/-|frameshift_variant	29.14955571784316	0.6417842315402807	5				NaN	NaN	0	NaN	9056	4784	13841
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13847	38.745	NaN	4073.6	30	0	674.15	0.214	+			38723	SSLFSLLSK	9	60	491.28454322190294	980.5545335106059	2	491.28448486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSLFSLLSK_	ENSG00000141627|ENST00000675505|DYM	72.87924865735499	0.12833875048249987	5				NaN	NaN	0	NaN	9058	4787	13846
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13848	38.748	NaN	2109.5	30	0	96.327	0.106				-1	GMSIPSLWY	9	67	535.2535348958855	NaN	0	535.25390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_GM(Oxidation (M))SIPSLWY_	ENSG00000158865|ENST00000424767|SLC5A11;nc|ENSG00000158865|Q8WWX8-2|SLC5A11;nc|ENSG00000158865|Q8WWX8-3|SLC5A11;nc|ENSG00000158865|Q8WWX8-4|SLC5A11;nc|ENSG00000158865|Q8WWX8-5|SLC5A11	30.503639358989545	0.3235605894931338	5				NaN	NaN	0	NaN	9059	4787	13846
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13849	38.75	NaN	939.57	30	0	81.295	0.106	+			2086	ALEMGVSSLM	10	47	519.2529442880846	NaN	0	519.2532348632812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ALEMGVSSLM_	ENSG00000111859|ENST00000379446|NEDD9;nc|ENSG00000111859|Q14511-3|NEDD9	29.14955571784316	0.4044631218331212	5				NaN	NaN	0	NaN	9060	4787	13846
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13850	38.752	NaN	1265.3	30	0	294.72	0.036	+			7345	DCADGSDERN	10	54	541.1975708007812	NaN	0	541.1975708007812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DCADGSDERN_	ENSG00000168702|ENST00000389484|LRP1B;LRP1B|p.C3762Lfs*2|1|0.32|ENSG00000168702|chr2:140358089-140358090|-/A|frameshift_variant;LRP1B|p.G4130Mfs*20|1|0.06|ENSG00000168702|chr2:140324019-140324020|-/AT|frameshift_variant;LRP1B|p.H4368Tfs*4|1|0.47|ENSG00000168702|chr2:140274465-140274465|C/-|frameshift_variant;LRP1B|p.N4135Mfs*14|1|0.13|ENSG00000168702|chr2:140324003-140324003|T/-|frameshift_variant;LRP1B|p.R3957Kfs*11|2|0.15|ENSG00000168702|chr2:140350819-140350820|-/T|frameshift_variant	23.52269567125451	0.42010282974921537	5				NaN	NaN	0	NaN	9061	4787	13846
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13857	38.769	NaN	2585.1	30	0	347.04	0.214	+			11951	FVKGRCMLI	9	64	533.8005626806392	1065.5865724280784	2	533.801513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FVKGRCMLI_	ENSG00000138375|ENST00000357276|SMARCAL1	53.351449002276354	0.2690372970092375	5				NaN	NaN	0	NaN	9065	4790	13856
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13858	38.772	NaN	1534.7	30	0	392.93	0.035			+	21247	KLKQLCARA	9	55	515.8112822195035	NaN	0	515.8109130859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KLKQLCARA_	REV__ENSG00000140521|ENST00000268124|POLG;REV__POLG|p.H659Qfs*24|1|0.2|ENSG00000140521|chr15:89324199-89324200|AG/-|frameshift_variant	24.20275056022122	0.35506675290109213	5				NaN	NaN	0	NaN	9066	4790	13856
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13867	38.794	NaN	895.57	30	0	96.871	0.142	+			9254	EGVNRILL	8	39	457.27660663499586	912.5386603367917	2	457.2760925292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EGVNRILL_	ENST00000401813.7_1_1:2130482-2130731:-|nuORF	29.14955571784316	0.7342621283720113	5				NaN	NaN	0	NaN	9072	4793	13866
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13876	38.828	NaN	2189	30	0	590.06	0.144	+			517	ACNLVLPTGDA	11	53	537.2690803549496	1072.523607776699	2	537.2686157226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ACNLVLPTGDA_	ENST00000326291.10_1_13:73356377-73356470:+|nuORF	24.519189625965996	0.7326048944360514	5				NaN	NaN	0	NaN	9075	4799	13875
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13892	38.883	NaN	2944.8	30	0	369.83	0.214			+	28991	NSLYQRLE	8	66	511.7673095793605	1021.520066225521	2	511.7674865722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NSLYQRLE_	REV__ENSG00000166833|ENST00000349880|NAV2;REV__nc|ENSG00000166833|Q8IVL1-10|NAV2;REV__nc|ENSG00000166833|Q8IVL1-11|NAV2;REV__nc|ENSG00000166833|Q8IVL1-12|NAV2;REV__nc|ENSG00000166833|Q8IVL1-13|NAV2;REV__nc|ENSG00000166833|Q8IVL1-2|NAV2;REV__nc|ENSG00000166833|Q8IVL1-4|NAV2;REV__nc|ENSG00000166833|Q8IVL1-5|NAV2;REV__nc|ENSG00000166833|Q8IVL1-6|NAV2;REV__nc|ENSG00000166833|Q8IVL1-7|NAV2;REV__nc|ENSG00000166833|Q8IVL1-8|NAV2;REV__nc|ENSG00000166833|Q8IVL1-9|NAV2;REV__nc|ENSG00000166833|Q8IVL1|NAV2	39.252832667884924	0.6609488554722044	5				NaN	NaN	0	NaN	9082	4808	13891
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13893	38.886	NaN	1356.8	30	0	231.92	0.036				-1	VMVTLQGFVG	10	65	533.78466796875	NaN	0	533.78466796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_VM(Oxidation (M))VTLQGFVG_	ENSG00000166377|ENST00000426216|ATP9B;ENST00000585674.1_1_18:76966984-77037243:+|nuORF;ENST00000586366.5_1_18:76967000-77013542:+|nuORF;nc|ENSG00000166377|O43861-2|ATP9B	51.33545320467046	0.297159550775418	5				NaN	NaN	0	NaN	9083	4808	13891
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13902	38.918	NaN	3814.3	30	0	647.78	0.215	+			10866	FAVAPNQNL	9	57	487.25870661498783	972.5028602967757	2	487.2590026855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FAVAPNQNL_	COL6A2|p.P584Lfs*12|1|0.46|ENSG00000142173|chr21:46124896-46124896|C/-|frameshift_variant;ENSG00000142173|ENST00000300527|COL6A2;nc|ENSG00000142173|P12110-2|COL6A2;nc|ENSG00000142173|P12110-3|COL6A2	63.30626980617807	0.18605348971131092	5				NaN	NaN	0	NaN	9086	4814	13901
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13903	38.922	NaN	2812.2	30	0	387.03	0.035	+			17793	IETTGTYQL	9	63	513.2612877501144	1024.5080225670288	2	513.261962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IETTGTYQL_	ENSG00000007171|ENST00000313735|NOS2;nc|ENSG00000007171|P35228-2|NOS2;NOS2|p.A650Pfs*53|1|0.21|ENSG00000007171|chr17:27769063-27769063|C/-|frameshift_variant;NOS2|p.Y709*|1|0.33|ENSG00000007171|chr17:27767745-27767745|G/-|frameshift_variant	98.62937762414208	0.04060045538121712	5				NaN	NaN	0	NaN	9087	4814	13901
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13907	38.937	NaN	1651.4	30	0	495.9	0.214				-1	NLPCQALT	8	48	458.73114824978853	915.4477435663771	2	458.7315979003906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_NLPC(Carbamidomethyl (C))QALT_	ENST00000371269.7_1_1:55315325-55315445:-|nuORF	60.97194046774394	0.49215940876911696	5				NaN	NaN	0	NaN	9088	4817	13906
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13908	38.94	NaN	1507.4	30	0	150.98	0.035	+			35847	SEDEVKLAL	9	50	502.26888160954127	1002.5232102858826	2	502.2691955566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEDEVKLAL_	ENSG00000169045|ENST00000393432|HNRNPH1;ENST00000513972.5_1_5:179047887-179050134:-|nuORF;ENST00000514332.5_1_5:179048171-179050134:-|nuORF;ENST00000524180.5_1_5:179047015-179050134:-|nuORF	58.22992032128504	0.22837015374068087	5				NaN	NaN	0	NaN	9089	4817	13906
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13915	38.957	NaN	3144.6	30	0	398.78	0.214	+			42065	SYANVQDGF	9	56	500.72211523713446	999.4296775410689	2	500.7222900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SYANVQDGF_	ENSG00000152766|ENST00000371930|ANKRD22	83.6470233535746	0.08277643980271215	5				NaN	NaN	0	NaN	9093	4820	13914
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13916	38.96	NaN	1854.5	30	0	260.73	0.106	+			26799	LVSGTQVL	8	43	408.7447812372957	815.4750095413914	2	408.7450256347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LVSGTQVL_	ENSG00000100239|ENST00000612753|PPP6R2;nc|ENSG00000100239|O75170-2|PPP6R2;nc|ENSG00000100239|O75170-3|PPP6R2;nc|ENSG00000100239|O75170-4|PPP6R2;nc|ENSG00000100239|O75170-6|PPP6R2;nc|ENSG00000100239|O75170|PPP6R2;PPP6R2|p.E897Rfs*10|1|0.37|ENSG00000100239|chr22:50443948-50443948|C/-|frameshift_variant;PPP6R2|p.H660Mfs*72|2|0.43|ENSG00000100239|chr22:50438607-50438607|C/-|frameshift_variant;PPP6R2|p.K449Sfs*24|1|0.17|ENSG00000100239|chr22:50432274-50432274|A/-|frameshift_variant;PPP6R2|p.P703Lfs*29|2|0.3|ENSG00000100239|chr22:50438737-50438737|G/-|frameshift_variant;PPP6R2|p.P854Rfs*23|1|0.41|ENSG00000100239|chr22:50440981-50440981|C/-|frameshift_variant	79.9392285194092	0.32408006123154964	5				NaN	NaN	0	NaN	9094	4820	13914
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13917	38.962	NaN	1286.2	30	0	95.845	0.034	+			15892	HAAAFPITE	9	52	478.74550757056807	955.4764622079362	2	478.7449035644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HAAAFPITE_	ENST00000592937.1_1_19:2477660-2478092:+|nuORF	31.954861631926434	0.5046124803899898	5				NaN	NaN	0	NaN	9095	4820	13914
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13922	38.977	NaN	6094.1	30	0	1278.9	0.143	+			39513	STFNVFVGK	9	62	499.7687715917855	997.522990250371	2	499.768798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STFNVFVGK_	ENSG00000122642|ENST00000242209|FKBP9;ENST00000494374.5_1_7:32997059-33028356:+|nuORF;FKBP9|p.N129Ifs*10|7|0.31|ENSG00000122642|chr7:32975192-32975192|C/-|frameshift_variant;FKBP9|p.P380Lfs*6|1|0.38|ENSG00000122642|chr7:32996258-32996258|C/-|frameshift_variant;nc|ENSG00000122642|O95302-3|FKBP9	109.47833844074708	0.029530294723441826	5				NaN	NaN	0	NaN	9097	4823	13921
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13940	39.048	NaN	1602.1	30	0	334.13	0.214				-1	GSEHGFCF	8	49	470.68441109381837	939.3542692544368	2	470.683837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GSEHGFC(Carbamidomethyl (C))F_	nc|ENSG00000226124|E5RQL4|FTCDNL1	28.2542754592877	0.7411748056684583	5				NaN	NaN	0	NaN	9103	4835	13939
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13941	39.051	NaN	1204.9	30	0	152.02	0.036	+			45846	VALGLGAQPQP	11	54	525.8004127269985	NaN	0	525.7998046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VALGLGAQPQP_	ENST00000292408.8_1_5:176524707-176524845:+|nuORF	24.519189625965996	0.45614437233802635	5				NaN	NaN	0	NaN	9104	4835	13939
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13956	39.105	NaN	12619	30	0	3033.7	0.214	+			37141	SITSVFITK	9	61	498.2920613257109	994.5695697182218	2	498.2919006347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SITSVFITK_	ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;TRRAP-ASNS|1|fusion;TRRAP-ASNS|2|fusion;TRRAP|p.K3443Sfs*19|1|0.28|ENSG00000196367|chr7:99004246-99004246|A/-|frameshift_variant	126.24258497203832	0.01742065577488747	5				NaN	NaN	0	NaN	9110	4844	13955
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13957	39.109	NaN	3336.3	30	0	438.08	0.106	+			45309	TVSDAILRY	9	62	519.2850762348681	1036.5555995365362	2	519.2850341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVSDAILRY_	ENSG00000002919|ENST00000359238|SNX11;nc|ENSG00000002919|Q9Y5W9-2|SNX11	88.17693792209575	0.07000514020414955	5				NaN	NaN	0	NaN	9111	4844	13955
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13958	39.111	NaN	1276.8	30	0	48.011	0.038	+			49831	VYSRYFTTY	9	62	600.2898678883461	NaN	0	600.29052734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	39.252832667884924	0.27938773122138094	5				NaN	NaN	0	NaN	9112	4844	13955
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13969	39.135	NaN	1242.8	30	0	134.99	0.214			+	12010	FVYEQFQV	8	53	530.2617328321255	NaN	0	530.2618408203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FVYEQFQV_	REV__ENSG00000184344|ENST00000329913|GDF3	31.954861631926434	1.7418937515398478	5				NaN	NaN	0	NaN	9120	4847	13968
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13970	39.138	NaN	1179.8	30	0	198.09	0.035			+	-1	GKFFCKSL	8	49	493.7613239779459	985.5080950226918	2	493.7608337402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GKFFC(Carbamidomethyl (C))KSL_	REV__ENST00000263026.9_1_16:22298140-22298332:+|nuORF	47.91560031466742	0.6071945918984287	5				NaN	NaN	0	NaN	9121	4847	13968
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13976	39.154	NaN	1062.4	30	0	67.863	0.214	+			28257	NDIVVKVL	8	53	450.2815679047751	898.5485828763502	2	450.2818298339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NDIVVKVL_	ENSG00000166333|ENST00000299421|ILK;nc|ENSG00000166333|Q13418-2|ILK;nc|ENSG00000166333|Q13418-3|ILK	93.1432384553994	0.2679547234115296	5				NaN	NaN	0	NaN	9124	4850	13975
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13977	39.158	NaN	883.07	30	0	70.061	0.035			+	30603	QAQRARGAPG	10	41	506.2776184082031	NaN	0	506.2776184082031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QAQRARGAPG_	REV__ENST00000505443.1_1_5:3531983-3536103:-|nuORF	35.61828744233558	0.3832230071539346	5				NaN	NaN	0	NaN	9125	4850	13975
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13981	39.174	NaN	2122.9	30	0	378.35	0.214			+	-1	TEPNLVQLC	9	60	537.2689567665352	1072.5233605998703	2	537.26904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_TEPNLVQLC(Carbamidomethyl (C))_	REV__ENSG00000136933|ENST00000373538|RABEPK	31.954861631926434	0.5046124803899898	5				NaN	NaN	0	NaN	9126	4853	13980
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13982	39.177	NaN	791.4	30	0	163.57	0.033	+			13221	GIGSVLPLK	9	40	442.28389057052067	NaN	0	442.28375244140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GIGSVLPLK_	ENSG00000162437|ENST00000294428|RAVER2;nc|ENSG00000162437|Q9HCJ3-2|RAVER2	66.42927471994793	0.121898005645852	5				NaN	NaN	0	NaN	9127	4853	13980
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13994	39.213	NaN	2539.8	30	0	478.52	0.143	+			40871	SVFGTMPLK	9	50	490.2676587421249	978.5207645510499	2	490.2673645019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVFGTMPLK_	ENSG00000151348|ENST00000533608|EXT2;nc|ENSG00000151348|Q93063-2|EXT2;nc|ENSG00000151348|Q93063-3|EXT2	64.20726635412375	0.17854274437659667	5				NaN	NaN	0	NaN	9133	4859	13993
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14004	39.249	NaN	1958.2	30	0	338.38	0.144	+			45618	TYQDIQNTI	9	50	548.2698343070585	NaN	0	548.2689819335938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TYQDIQNTI_	ENSG00000181222|ENST00000674977|POLR2A;nc|ENSG00000181222|P24928|POLR2A	53.08895987439943	0.18540527177656715	5				NaN	NaN	0	NaN	9137	4865	14003
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14012	39.272	NaN	2442.6	30	0	410.62	0.143	+			23610	LAPGLVSPSAN	11	50	513.2854329808126	1024.5563130284252	2	513.2855834960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LAPGLVSPSAN_	ENST00000409293.5_2_19:1277295-1279069:+|nuORF	42.86426827375447	0.5187511139693657	5				NaN	NaN	0	NaN	9142	4868	14011
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14016	39.288	NaN	1100.5	30	0	221.71	0.142	+			12077	GAAGVHFIY	9	41	467.7431626905326	933.4717724478652	2	467.743408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GAAGVHFIY_	ENSG00000169813|ENST00000682386|HNRNPF	29.841539824830324	0.5243625958137083	5				NaN	NaN	0	NaN	9143	4871	14015
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14025	39.324	NaN	1335.1	30	0	156.93	0.214	+			50392	YAAEYANAL	9	48	493.2350976370205	NaN	0	493.2348937988281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YAAEYANAL_	ENSG00000140274|ENST00000323030|DUOXA2	51.33545320467046	0.19748963086191895	5				NaN	NaN	0	NaN	9146	4877	14024
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14026	39.328	NaN	1679.1	30	0	374.24	0.035	+			5836	AVIGPDVFAK	10	56	508.79291036381187	1015.5712677944238	2	508.7926330566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVIGPDVFAK_	ENSG00000261150|ENST00000615648|EPPK1;EPPK1|p.G2015Vfs*36|2|0.33|ENSG00000261150|chr8:143867210-143867210|C/-|frameshift_variant;EPPK1|p.Q829Rfs*8|1|0.05|ENSG00000261150|chr8:143870770-143870770|C/-|frameshift_variant;EPPK1|p.Y695Ifs*68|1|0.36|ENSG00000261150|chr8:143871171-143871172|-/T|frameshift_variant	45.97224482568171	0.49411383603842696	5				NaN	NaN	0	NaN	9147	4877	14024
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14031	39.343	NaN	1401.9	30	0	152.09	0.145				-1	EWGEEGFMAH	10	57	604.73876953125	NaN	0	604.73876953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_EWGEEGFM(Oxidation (M))AH_	ENSG00000109576|ENST00000337664|AADAT;nc|ENSG00000109576|Q8N5Z0-2|AADAT	30.503639358989545	0.4000169810673414	5				NaN	NaN	0	NaN	9149	4880	14030
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14039	39.377	NaN	1663.8	30	0	393.83	0.142	+			22918	KVPESLVR	8	40	464.28487407074357	926.5551952082872	2	464.28460693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVPESLVR_	ENSG00000153714|ENST00000319264|LURAP1L;ENST00000489107.1_1_9:12775714-12777225:+|nuORF	29.14955571784316	0.7342621283720113	5				NaN	NaN	0	NaN	9151	4886	14038
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14049	39.411	NaN	2446.7	30	0	184.25	0.144	+			42192	TAADIFKQY	9	60	528.7721808587179	1055.5298087842357	2	528.772705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAADIFKQY_	ENSG00000101972|ENST00000371145|STAG2;nc|ENSG00000101972|Q8N3U4|STAG2;STAG2|p.T1208Kfs*3|1|0.87|ENSG00000101972|chrX:124095400-124095400|C/-|frameshift_variant	124.08010499294276	0.018729767491916592	5				NaN	NaN	0	NaN	9155	4892	14048
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14065	39.465	NaN	2640.9	30	0	958.93	0.214				-1	 	0	53	577.2969310198739	1728.8689636598215	3	577.2991943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9162	4901	14064
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14066	39.469	NaN	1203	30	0	206.58	0.033	+			11167	FGPGPGSNF	9	36	440.2036715631662	878.3927901931324	2	440.2037658691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FGPGPGSNF_	ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;ENST00000495810.1_1_7:26235422-26236427:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1	37.15910966729921	0.4535818937225704	5				NaN	NaN	0	NaN	9163	4901	14064
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14076	39.501	NaN	1460.9	30	0	118.58	0.143	+			37981	SPIDVVEKY	9	56	525.2805801017541	1048.5466072703082	2	525.2815551757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SPIDVVEKY_	ENSG00000117153|ENST00000367261|KLHL12;nc|ENSG00000117153|Q53G59-2|KLHL12	46.45678178249821	0.34452392205506005	5				NaN	NaN	0	NaN	9167	4907	14075
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14081	39.517	NaN	2745	30	0	320.46	0.214	+			36338	SESSLALRL	9	56	488.27710437303114	974.5396558128623	2	488.2769775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SESSLALRL_	DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;nc|ENSG00000187908|Q9UGM3-2|DMBT1;nc|ENSG00000187908|Q9UGM3-2|DMBT1;nc|ENSG00000187908|Q9UGM3-2|DMBT1;nc|ENSG00000187908|Q9UGM3-2|DMBT1;nc|ENSG00000187908|Q9UGM3-2|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-4|DMBT1;nc|ENSG00000187908|Q9UGM3-4|DMBT1;nc|ENSG00000187908|Q9UGM3-4|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-8|DMBT1;nc|ENSG00000187908|Q9UGM3-8|DMBT1;nc|ENSG00000187908|Q9UGM3-8|DMBT1;nc|ENSG00000187908|Q9UGM3-8|DMBT1;nc|ENSG00000187908|Q9UGM3-9|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1	87.69643885390035	0.07135982304947239	5				NaN	NaN	0	NaN	9169	4910	14080
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14082	39.521	NaN	2170.4	30	0	401.88	0.106			+	11921	FVCHNRVQ	8	59	530.2617328321255	NaN	0	530.2619018554688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_FVC(Carbamidomethyl (C))HNRVQ_	REV__ENST00000562325.5_1_16:65087800-65155878:-|nuORF	44.53106598305862	1.7418937515398478	5				NaN	NaN	0	NaN	9170	4910	14080
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14083	39.522	NaN	1583.9	30	0	220.57	0.106			+	30570	QAMPTPTSQL	10	51	537.2689567665352	1072.5233605998703	2	537.2693481445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QAMPTPTSQL_	REV__NPAS2|p.A490T|1|0.44|ENSG00000170485|chr2:100977785-100977785|G/A|missense_variant	31.529811441608018	0.6223461015008678	5				NaN	NaN	0	NaN	9171	4910	14080
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14084	39.524	NaN	1083.3	30	0	63.191	0.035			+	26030	LSLGASFARL	10	58	517.8032216252969	1033.5918903173938	2	517.8040771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSLGASFARL_	REV__ENST00000461200.5_1_11:2323274-2335767:+|nuORF	44.377184641726394	0.5088115166961078	5				NaN	NaN	0	NaN	9172	4910	14080
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14101	39.576	NaN	1503.1	30	0	202.3	0.142	+			42728	TDGKVFQF	8	48	471.2401474803858	940.4657420275717	2	471.23944091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TDGKVFQF_	ENSG00000114391|ENST00000394077|RPL24	49.44154591367651	0.597725784090933	5				NaN	NaN	0	NaN	9180	4919	14100
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14106	39.593	NaN	1163	30	0	104.66	0.214				-1	AVPGGGWAM	9	46	431.19807377034454	NaN	0	431.1986999511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_AVPGGGWAM(Oxidation (M))_	ENSG00000149218|ENST00000278505|ENDOD1	29.841539824830324	0.32690339240668626	5				NaN	NaN	0	NaN	9182	4922	14105
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14107	39.597	NaN	3055.3	30	0	233.99	0.106	+			40068	STNNWVLIK	9	67	537.800727213793	1073.586901494386	2	537.8011474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STNNWVLIK_	ENSG00000065000|ENST00000643116|AP3D1;nc|ENSG00000065000|O14617-4|AP3D1;nc|ENSG00000065000|O14617|AP3D1	62.107414245175825	0.1960472003779324	5				NaN	NaN	0	NaN	9183	4922	14105
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14108	39.599	NaN	1719	30	0	463.9	0.033	+			48751	VTVPPGPSL	9	42	433.7532157024969	865.4918784717938	2	434.2552185058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTVPPGPSL_	ENSG00000159352|ENST00000368884|PSMD4;ENST00000480546.1_1_10:95718567-95721153:-|nuORF;nc|ENSG00000159352|P55036-2|PSMD4;nc|ENSG00000180764|A2A3N6|PIPSL	49.44154591367651	0.3095138337212152	5				NaN	NaN	0	NaN	9184	4922	14105
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14119	39.624	NaN	3324.1	30	0	477.14	0.214	+			36618	SGFEGMFTK	9	60	502.23114954792743	1002.4477461626549	2	502.2313232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SGFEGMFTK_	ENSG00000153201|ENST00000283195|RANBP2;ENSG00000153201|ENST00000283195|RANBP2;ENSG00000153201|ENST00000283195|RANBP2;RANBP2|p.C2737Vfs*35|1|0.18|ENSG00000153201|chr2:108772957-108772957|T/-|frameshift_variant;RANBP2|p.C2737Vfs*35|1|0.18|ENSG00000153201|chr2:108772957-108772957|T/-|frameshift_variant;RANBP2|p.C2737Vfs*35|1|0.18|ENSG00000153201|chr2:108772957-108772957|T/-|frameshift_variant;RANBP2|p.F3068Lfs*10|1|0.06|ENSG00000153201|chr2:108782692-108782692|T/-|frameshift_variant;RANBP2|p.F3068Lfs*10|1|0.06|ENSG00000153201|chr2:108782692-108782692|T/-|frameshift_variant;RANBP2|p.F3068Lfs*10|1|0.06|ENSG00000153201|chr2:108782692-108782692|T/-|frameshift_variant;RANBP2|p.H3114Sfs*18|1|0.33|ENSG00000153201|chr2:108782827-108782828|-/T|frameshift_variant;RANBP2|p.H3114Sfs*18|1|0.33|ENSG00000153201|chr2:108782827-108782828|-/T|frameshift_variant;RANBP2|p.H3114Sfs*18|1|0.33|ENSG00000153201|chr2:108782827-108782828|-/T|frameshift_variant;RANBP2|p.K1989Nfs*9|1|0.05|ENSG00000153201|chr2:108766505-108766506|-/TATCCTG|frameshift_variant;RANBP2|p.K1989Nfs*9|1|0.05|ENSG00000153201|chr2:108766505-108766506|-/TATCCTG|frameshift_variant;RANBP2|p.K1989Nfs*9|1|0.05|ENSG00000153201|chr2:108766505-108766506|-/TATCCTG|frameshift_variant;RANBP2|p.K2576Nfs*63|2|0.22|ENSG00000153201|chr2:108768262-108768262|A/-|frameshift_variant;RANBP2|p.K2576Nfs*63|2|0.22|ENSG00000153201|chr2:108768262-108768262|A/-|frameshift_variant;RANBP2|p.K2576Nfs*63|2|0.22|ENSG00000153201|chr2:108768262-108768262|A/-|frameshift_variant	78.26377905018397	0.10505600812668463	5				NaN	NaN	0	NaN	9192	4925	14118
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14120	39.628	NaN	1830.7	30	0	165.68	0.106	+			17672	IEKLAVEAL	9	53	493.29997535969045	984.5853977861809	2	493.30059814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IEKLAVEAL_	ENSG00000166165|ENST00000348956|CKB	80.91624569148213	0.09358672614454815	5				NaN	NaN	0	NaN	9193	4925	14118
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14121	39.63	NaN	1487.3	30	0	239.36	0.106	+			47838	VSLAVLGALGA	11	48	485.8002618476516	969.5859707621032	2	485.8002014160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSLAVLGALGA_	ENSG00000102921|ENST00000262384|N4BP1;N4BP1|p.I719Mfs*8|1|0.17|ENSG00000102921|chr16:48548066-48548075|ATTTGTCACA/-|frameshift_variant;N4BP1|p.N610Mfs*8|2|0.17|ENSG00000102921|chr16:48560814-48560814|T/-|frameshift_variant	40.77816245573522	0.5472954108598816	5				NaN	NaN	0	NaN	9194	4925	14118
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14122	39.631	NaN	1010.6	30	0	88.029	0.034	+			36943	SILNLVSPL	9	50	478.2949605286817	NaN	0	478.294921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SILNLVSPL_	ENSG00000127526|ENST00000595753|SLC35E1	49.44154591367651	0.21054156626303966	5				NaN	NaN	0	NaN	9195	4925	14118
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14126	39.646	NaN	3235.1	30	0	507.38	0.144			+	31575	QLQVNKESF	9	59	546.7875041592685	1091.5604553853368	2	546.78857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QLQVNKESF_	REV__ENST00000422653.1_1_9:88371036-88385349:+|nuORF	77.31757898189308	0.1091473830098891	5				NaN	NaN	0	NaN	9196	4928	14125
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14143	39.702	NaN	1123.4	30	0	142.85	0.144			+	50953	YIEEVQVGK	9	55	532.7859658478709	NaN	0	532.7852783203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YIEEVQVGK_	REV__ENSG00000163930|ENST00000460680|BAP1	21.9598887501803	0.3626577482100488	5				NaN	NaN	0	NaN	9204	4937	14142
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14149	39.72	NaN	1810.6	30	0	148.28	0.214			+	-1	LVSAERCALY	10	59	591.3028681946035	1180.591183456007	2	591.3017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_LVSAERC(Carbamidomethyl (C))ALY_	REV__ENST00000371269.7_1_1:55316228-55316366:-|nuORF	47.657333605630114	0.47858658696240314	5				NaN	NaN	0	NaN	9207	4940	14148
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14150	39.724	NaN	1226.8	30	0	71.716	0.039			+	-1	KRYIMHCMAI	10	63	649.3162255183557	NaN	0	649.3160400390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Oxidation (M)	_KRYIM(Oxidation (M))HCM(Oxidation (M))AI_	REV__ABCC4|p.V168I|1|0.32|ENSG00000125257|chr13:95234639-95234639|C/T|missense_variant	25.450171626174864	0.4166100689776264	5				NaN	NaN	0	NaN	9208	4940	14148
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14166	39.775	NaN	1562.8	30	0	190.24	0.143	+			16053	HAVVNLINY	9	51	521.7880531027289	1041.5615532722577	2	521.7882690429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HAVVNLINY_	CTNNB1|p.L301Hfs*16|1|0.05|ENSG00000168036|chr3:41225827-41225831|TTCAA/-|frameshift_variant;CTNNB1|p.M271Wfs*5|1|0.08|ENSG00000168036|chr3:41225733-41225733|A/-|frameshift_variant;ENSG00000168036|ENST00000349496|CTNNB1	55.50420428727701	0.2510918378945873	5				NaN	NaN	0	NaN	9215	4949	14165
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14173	39.795	NaN	1921.7	30	0	203.23	0.143	+			35539	SAVLFTITK	9	51	490.29490196655615	978.5752509999123	2	490.2961730957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAVLFTITK_	ENSG00000177189|ENST00000379565|RPS6KA3;RPS6KA3|p.N713Rfs*13|1|0.08|ENSG00000177189|chrX:20155483-20155484|-/AGCACAAGTTC|frameshift_variant	51.19269402634007	0.2889735674168909	5				NaN	NaN	0	NaN	9219	4952	14172
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14178	39.812	NaN	1504.5	30	0	316.89	0.144			+	9849	EPSSVKMRGT	10	40	546.2809828218378	NaN	0	546.281494140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EPSSVKMRGT_	REV__ENST00000437600.8_1_7:101459221-101671393:+|nuORF;REV__ENST00000547394.6_1_7:101459320-101713628:+|nuORF;REV__ENST00000558469.5_1_7:101462218-101671393:+|nuORF;REV__ENST00000607092.1_1_7:101459320-101559506:+|nuORF	19.1035232394073	0.4201028297492154	5				NaN	NaN	0	NaN	9221	4955	14177
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14184	39.83	NaN	1506.6	30	0	98.724	0.144			+	45797	VAGYQGQVSF	10	57	528.2640318187041	NaN	0	528.2639770507812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VAGYQGQVSF_	REV__ENSG00000090097|ENST00000461554|PCBP4;REV__ENST00000492809.5_1_3:51992079-51994784:-|nuORF;REV__ENST00000497390.5_1_3:51992079-51994784:-|nuORF;REV__nc|ENSG00000090097|P57723-2|PCBP4	54.776311868738084	0.27540594196716844	5				NaN	NaN	0	NaN	9224	4958	14183
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14191	39.85	NaN	4396.8	30	0	1054.7	0.214	+			38749	SSLPTQLFK	9	62	510.7898331857444	1019.5651134382888	2	510.79010009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSLPTQLFK_	ENSG00000017427|ENST00000337514|IGF1;nc|ENSG00000017427|P05019-4|IGF1;nc|ENSG00000017427|P05019|IGF1	88.17693792209575	0.07000514020414955	5				NaN	NaN	0	NaN	9228	4961	14190
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14192	39.854	NaN	2200.9	30	0	291.19	0.036	+			1459	AFFWSSTLT	9	57	530.2610966256061	1058.5076403180121	2	530.260986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AFFWSSTLT_	ENSG00000213096|ENST00000357002|ZNF254;nc|ENSG00000213096|O75437-2|ZNF254	30.503639358989545	0.5181749237905803	5				NaN	NaN	0	NaN	9229	4961	14190
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14197	39.869	NaN	2229.4	30	0	305.34	0.214	+			35726	SDLSHMGLSL	10	59	530.2610966256061	1058.5076403180121	2	530.2620239257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SDLSHMGLSL_	ENST00000526084.1_1_11:7690232-7690520:-|nuORF	32.81241826257853	0.6118718159329168	5				NaN	NaN	0	NaN	9231	4964	14196
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14198	39.873	NaN	1380.4	30	0	224.92	0.035	+			47258	VMSATFAKF	9	51	501.25981395918063	NaN	0	501.26068115234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VMSATFAKF_	ENSG00000077380|ENST00000397119|DYNC1I2;ENST00000435916.1_1_10:52025510-52026503:+|nuORF;ENST00000479806.1_1_2:172583261-172604396:+|nuORF;nc|ENSG00000077380|Q13409-2|DYNC1I2;nc|ENSG00000077380|Q13409-3|DYNC1I2;nc|ENSG00000077380|Q13409-5|DYNC1I2;nc|ENSG00000077380|Q13409-6|DYNC1I2;nc|ENSG00000077380|Q13409-7|DYNC1I2	62.107414245175825	0.1403307765918332	5				NaN	NaN	0	NaN	9232	4964	14196
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14205	39.891	NaN	1388.9	30	0	139.17	0.141	+			37604	SLPQAATFG	9	48	446.23225367173563	890.4499544102713	2	446.2318420410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLPQAATFG_	ENSG00000131149|ENST00000253458|GSE1;GSE1|p.P1093Qfs*45|1|0.45|ENSG00000131149|chr16:85668282-85668282|C/-|frameshift_variant;nc|ENSG00000131149|Q14687-2|GSE1;nc|ENSG00000131149|Q14687-3|GSE1	49.44154591367651	0.3095138337212152	5				NaN	NaN	0	NaN	9236	4967	14204
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14210	39.908	NaN	809.8	30	0	72.311	0.142				-1	PSLSNCFL	8	52	469.22777579548773	NaN	0	469.227783203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_PSLSNC(Carbamidomethyl (C))FL_	ENST00000520489.5_1_8:22482816-22483080:-|nuORF	37.15910966729921	1.7418937515398478	5				NaN	NaN	0	NaN	9238	4970	14209
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14217	39.94	NaN	1797.5	30	0	108.61	0.152			+	-1	KWVCKQCRRWR	11	71	535.9516224929745	NaN	0	535.6168212890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_KWVC(Carbamidomethyl (C))KQCRRWR_	REV__ENSG00000162975|ENST00000295082|KCNF1	17.833141474888023	0.456735970842152	5				NaN	NaN	0	NaN	9239	4976	14216
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14231	39.996	NaN	1465.9	30	0	200.58	0.143	+			27004	LYQQLLSF	8	49	506.27925206982474	1010.5439512064495	2	506.2789306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LYQQLLSF_	ENSG00000176406|ENST00000696799|RIMS2;nc|ENSG00000176406|Q9UQ26-1|RIMS2;nc|ENSG00000176406|Q9UQ26-3|RIMS2;nc|ENSG00000176406|Q9UQ26-7|RIMS2;nc|ENSG00000176406|Q9UQ26-8|RIMS2;nc|ENSG00000176406|Q9UQ26|RIMS2	40.77816245573522	0.6514838689002179	5				NaN	NaN	0	NaN	9244	4985	14230
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14241	40.033	NaN	1414.3	30	0	134.49	0.143	+			38558	SSFGEFLSK	9	56	501.2505762585237	1000.4865995838475	2	501.2501220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSFGEFLSK_	nc|ENSG00000075790|Q9UHQ4-2|BCAP29	47.95952297671804	0.32689736945648856	5				NaN	NaN	0	NaN	9248	4991	14240
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14249	40.067	NaN	1536.2	30	0	311.2	0.214	+			4086	ATDLTFLEK	9	58	519.2798975958677	1036.5452422585354	2	519.2800903320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATDLTFLEK_	ENSG00000197879|ENST00000648651|MYO1C;ENST00000573961.1_1_17:1380797-1381223:-|nuORF;nc|ENSG00000197879|O00159-2|MYO1C;nc|ENSG00000197879|O00159-3|MYO1C	54.722347961057174	0.257609425301511	5				NaN	NaN	0	NaN	9250	4997	14248
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14250	40.071	NaN	1385.4	30	0	89.985	0.106	+			43593	TIIDTKGVTAL	11	63	566.335205078125	NaN	0	566.335205078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TIIDTKGVTAL_	ENSG00000137054|ENST00000377798|POLR1E;ENST00000442009.6_1_9:37489340-37503196:+|nuORF;nc|ENSG00000137054|Q9GZS1-1|POLR1E	41.1089822145965	0.37917734110163537	5				NaN	NaN	0	NaN	9251	4997	14248
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14251	40.073	NaN	2013.8	30	0	166.24	0.106				-1	MPVMRLFPCF	10	60	649.3160152896579	1296.6174776461157	2	649.3156127929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_MPVMRLFPC(Carbamidomethyl (C))F_	ENSG00000119630|ENST00000555567|PGF;ENST00000556939.5_1_14:75415208-75421945:-|nuORF;nc|ENSG00000119630|P49763-2|PGF;nc|ENSG00000119630|P49763-4|PGF;nc|ENSG00000119630|P49763|PGF	23.04248740728303	0.69165701907106	5				NaN	NaN	0	NaN	9252	4997	14248
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14252	40.074	NaN	1723.5	30	0	142.65	0.045			+	-1	RKWFCDWDRRK	11	56	551.6123046875	NaN	0	551.6123046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_RKWFC(Carbamidomethyl (C))DWDRRK_	REV__nc|ENSG00000151418|Q96LB4-3|ATP6V1G3	5.698786898958082	0.456735970842152	5				NaN	NaN	0	NaN	9253	4997	14248
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14263	40.109	NaN	1534.1	30	0	107.83	0.143	+			47210	VMAPRTVLL	9	61	500.3050016937114	998.5954504542228	2	500.30523681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VMAPRTVLL_	ENSG00000234745|ENST00000412585|HLA-B;ENST00000434333.1_1_6:31324722-31324935:-|nuORF;ENST00000498007.1_1_6:31324459-31324935:-|nuORF;HLA-B|p.G124Wfs*15|1|0.18|ENSG00000234745|chr6:31356416-31356417|-/A|frameshift_variant;HLA-B|p.H215Tfs*11|1|0.35|ENSG00000234745|chr6:31355569-31355569|G/-|frameshift_variant;HLA-B|p.P209Qfs*5|6|0.16|ENSG00000234745|chr6:31355586-31355586|G/-|frameshift_variant;HLA-B|p.P81Rfs*70|1|0.56|ENSG00000234745|chr6:31356791-31356791|C/-|frameshift_variant;HLA-B|p.R72Gfs*5|1|0.25|ENSG00000234745|chr6:31356818-31356818|C/-|frameshift_variant;HLA-B|p.V306Afs*13|1|0.49|ENSG00000234745|chr6:31355202-31355202|A/-|frameshift_variant;HLA-B|p.V312Cfs*22|1|0.28|ENSG00000234745|chr6:31355185-31355186|-/A|frameshift_variant	54.776311868738084	0.25715957988447635	5				NaN	NaN	0	NaN	9258	5003	14262
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14274	40.146	NaN	2219.8	30	0	172.05	0.214	+			28043	NAAKVFNLY	9	58	520.2822471265004	1038.5499413198006	2	520.2828979492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAAKVFNLY_	ENSG00000092964|ENST00000521913|DPYSL2;nc|ENSG00000092964|Q16555-2|DPYSL2;nc|ENSG00000092964|Q16555|DPYSL2	78.26377905018397	0.10505600812668463	5				NaN	NaN	0	NaN	9263	5009	14273
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14275	40.149	NaN	1343.6	30	0	208.99	0.034	+			42713	TDFKDKIV	8	48	483.26869657249534	964.5228402117907	2	483.2741394042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TDFKDKIV_	CARM1|p.I452Sfs*12|1|0.18|ENSG00000142453|chr19:10920679-10920683|TTGTG/-|frameshift_variant;ENSG00000142453|ENST00000327064|CARM1;nc|ENSG00000142453|Q86X55-1|CARM1;nc|ENSG00000142453|Q86X55-2|CARM1	32.81241826257853	0.7059802730411993	5				NaN	NaN	0	NaN	9264	5009	14273
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14285	40.182	NaN	2735.3	30	0	368.37	0.214			+	22037	KSIFIGLQS	9	65	496.7922658567918	991.5699787803836	2	496.79278564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSIFIGLQS_	REV__ENSG00000120509|ENST00000239666|PDZD11;REV__nc|ENSG00000120509|Q5EBL8-2|PDZD11	46.45678178249821	0.34452392205506005	5				NaN	NaN	0	NaN	9268	5015	14284
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14286	40.186	NaN	1506.2	30	0	149.57	0.034	+			35917	SEFPIRTL	8	51	481.76885854495777	961.5231641567156	2	481.7684326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEFPIRTL_	CKAP5|p.V1971Lfs*42|1|0.03|ENSG00000175216|chr11:46744211-46744212|-/TTGAAAAAAAG|frameshift_variant;ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5	39.252832667884924	0.6609488554722044	5				NaN	NaN	0	NaN	9269	5015	14284
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14291	40.201	NaN	984.76	30	0	136.54	0.214			+	28118	NAIIAPIALS	10	45	491.8002078257343	NaN	0	491.7999572753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAIIAPIALS_	REV__tr|U7SU85|U7SU85_FUSNUMultidrugexportproteinMepAOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01059PE=3SV=1	56.72105179125745	0.2610545891966633	5				NaN	NaN	0	NaN	9271	5018	14290
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14292	40.205	NaN	1461.7	30	0	411.77	0.044			+	21580	KPGQEYWAL	9	47	546.2803535606503	NaN	0	546.2796630859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KPGQEYWAL_	REV__ENST00000466174.5_1_19:12911560-12912565:-|nuORF;REV__nc|ENSG00000167815|P32119-2|PRDX2	24.20275056022122	0.35506675290109213	5				NaN	NaN	0	NaN	9272	5018	14290
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14300	40.223	NaN	5330.5	30	0	834.5	0.214	+			7310	DASKVVTVF	9	56	483.26869657249534	964.5228402117907	2	483.2690734863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DASKVVTVF_	ENSG00000071127|ENST00000499869|WDR1;ENST00000502962.5_1_4:10077004-10094774:-|nuORF;ENST00000515743.5_1_4:10078742-10093271:-|nuORF;nc|ENSG00000071127|O75083-3|WDR1	102.0615471778698	0.03709830720253279	5				NaN	NaN	0	NaN	9277	5021	14299
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14301	40.227	NaN	2002.4	30	0	336.51	0.036			+	18660	ISVKHPQADT	10	61	548.2948970544602	1094.5752411757203	2	548.2954711914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ISVKHPQADT_	REV__ENST00000558282.5_1_15:85734698-85737265:+|nuORF;REV__ENST00000558801.1_1_15:84960100-84962592:-|nuORF;REV__ENST00000560634.1_1_15:84855599-84858179:+|nuORF	39.252832667884924	0.5560298534376815	5				NaN	NaN	0	NaN	9278	5021	14299
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14309	40.247	NaN	6762.7	30	0	1068.2	0.214	+			36997	SIPGGYNAL	9	55	446.23225367173563	890.4499544102713	2	446.23211669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIPGGYNAL_	ENSG00000135018|ENST00000376395|UBQLN1;ENSG00000160803|ENST00000368309|UBQLN4;ENSG00000188021|ENST00000338222|UBQLN2;ENST00000533705.5_1_9:86284090-86294929:-|nuORF;nc|ENSG00000135018|Q9UMX0-2|UBQLN1;nc|ENSG00000135018|Q9UMX0-3|UBQLN1;UBQLN2|p.N281Sfs*92|1|0.34|ENSG00000188021|chrX:56564713-56564725|GAATGCCGCACAA/-|frameshift_variant;UBQLN2|p.P525Lfs*71|10|0.37|ENSG00000188021|chrX:56565441-56565441|C/-|frameshift_variant;UBQLN4|p.A385Pfs*7|1|0.03|ENSG00000160803|chr1:156042886-156042887|GC/-|frameshift_variant;UBQLN4|p.R283H|1|0.14|ENSG00000160803|chr1:156048553-156048553|C/T|missense_variant	138.8255168832474	0.011031062795199845	5				NaN	NaN	0	NaN	9283	5024	14308
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14310	40.25	NaN	1822.9	30	0	195.42	0.036				-1	LPTCGDQVY	9	57	526.7376486100723	1051.4607442869444	2	526.7383422851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LPTC(Carbamidomethyl (C))GDQVY_	ENSG00000111266|ENST00000298573|DUSP16	42.396135135203025	0.392153681582562	5				NaN	NaN	0	NaN	9284	5024	14308
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14317	40.267	NaN	1021.7	30	0	75.04	0.144	+			31645	QMSNITVTY	9	51	528.7544748884753	1055.4943968437506	2	528.7539672851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QMSNITVTY_	ENSG00000100028|ENST00000215829|SNRPD3;nc|ENSG00000286070|P62318-2|SNRPD3	41.42661286455405	0.403525789677298	5				NaN	NaN	0	NaN	9288	5027	14316
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14322	40.283	NaN	1623.5	30	0	281.44	0.214			+	-1	QNAIANLF	8	50	466.74553785804017	931.4765227828804	2	466.7453308105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))QNAIANLF_	REV__CNOT1|p.R2263H|1|0.26|ENSG00000125107|chr16:58523499-58523499|C/T|missense_variant;REV__ENSG00000125107|ENST00000317147|CNOT1;REV__nc|ENSG00000125107|A5YKK6-2|CNOT1	52.29916861842294	0.578018602984656	5				NaN	NaN	0	NaN	9290	5030	14321
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14323	40.287	NaN	1744.8	30	0	337.16	0.106				-1	MALPCLSAIA	10	55	531.7708361660278	1061.5271193988556	2	531.7715454101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))ALPC(Carbamidomethyl (C))LSAIA_	ENSG00000198838|ENST00000634891|RYR3;nc|ENSG00000198838|Q15413-2|RYR3;nc|ENSG00000198838|Q15413-3|RYR3;RYR3|p.E3943Rfs*18|1|0.12|ENSG00000198838|chr15:33837800-33837801|-/A|frameshift_variant;RYR3|p.N4580Mfs*8|1|0.37|ENSG00000198838|chr15:33853618-33853618|A/-|frameshift_variant	35.61828744233558	0.588957954432594	5				NaN	NaN	0	NaN	9291	5030	14321
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14324	40.289	NaN	1409.5	30	0	207.64	0.106			+	-1	NLLQLTVM	8	52	474.263360435305	946.51216793741	2	474.2636413574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_NLLQLTVM(Oxidation (M))_	REV__ENSG00000119321|ENST00000238256|FKBP15;REV__nc|ENSG00000119321|Q5T1M5-2|FKBP15	63.30626980617807	0.4690498839812213	5				NaN	NaN	0	NaN	9292	5030	14321
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14325	40.29	NaN	726.06	30	0	24.67	0.049			+	18363	IQNTWSYTQQI	11	52	691.34033203125	NaN	0	691.34033203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IQNTWSYTQQI_	REV__ENSG00000136492|ENST00000259008|BRIP1;REV__nc|ENSG00000136492|Q9BX63-2|BRIP1	18.531049691330335	0.456735970842152	5				NaN	NaN	0	NaN	9293	5030	14321
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14331	40.305	NaN	2498.1	30	0	580.21	0.214	+			35718	SDLKVIVM	8	49	452.76194855325014	903.5093441733003	2	452.7618408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SDLKVIVM_	ENSG00000109606|ENST00000336812|DHX15	76.7741389293348	0.3504530765139327	5				NaN	NaN	0	NaN	9296	5033	14330
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14332	40.309	NaN	3380	30	0	164.38	0.044			+	12031	FYFVRRHTWHR	11	77	535.6169653560232	NaN	0	535.6161499023438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FYFVRRHTWHR_	REV__ENST00000296575.7_1_4:145567307-145567847:+|nuORF	13.507942900623993	0.456735970842152	5				NaN	NaN	0	NaN	9297	5033	14330
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14340	40.327	NaN	1489.5	30	0	117.44	0.143	+			3584	ASVFGTMPLK	10	60	525.7859280622821	1049.557303191364	2	525.7862548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASVFGTMPLK_	ENSG00000151348|ENST00000533608|EXT2;nc|ENSG00000151348|Q93063-2|EXT2;nc|ENSG00000151348|Q93063-3|EXT2	65.46538089061403	0.31613324008013116	5				NaN	NaN	0	NaN	9302	5036	14339
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14352	40.378	NaN	1542.5	30	0	139.83	0.145				-1	VYAAYKHADGK	11	60	632.8217688821436	NaN	0	632.8197021484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))VYAAYKHADGK_	ENST00000601065.5_1_19:49605423-49611697:+|nuORF	34.08650109265054	0.41350691770670583	5				NaN	NaN	0	NaN	9305	5045	14351
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14373	40.465	NaN	2347.7	30	0	248.27	0.153	+			29244	NWRPRFKYYHW	11	65	551.6122145502077	NaN	0	551.6134643554688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NWRPRFKYYHW_	ENSG00000124067|ENST00000316341|SLC12A4;nc|ENSG00000124067|Q9UP95-2|SLC12A4;nc|ENSG00000124067|Q9UP95-3|SLC12A4;nc|ENSG00000124067|Q9UP95-4|SLC12A4;nc|ENSG00000124067|Q9UP95-5|SLC12A4;nc|ENSG00000124067|Q9UP95-6|SLC12A4;nc|ENSG00000124067|Q9UP95-7|SLC12A4	3.159230865173134	0.456735970842152	5				NaN	NaN	0	NaN	9311	5060	14372
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14381	40.499	NaN	2189.7	30	0	318.48	0.142	+			18849	IVALILSTK	9	64	479.3209617384063	956.6273705436126	2	479.3209228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IVALILSTK_	ENSG00000185883|ENST00000330398|ATP6V0C	85.16082228582465	0.07850854922700509	5				NaN	NaN	0	NaN	9313	5066	14380
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14386	40.516	NaN	1206.5	30	0	84.647	0.142			+	24277	LEVRLSPC	8	42	458.74786938838764	NaN	0	458.7483215332031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LEVRLSPC_	REV__ENST00000372070.7_1_1:46016687-46016741:+|nuORF	47.91560031466742	1.7418937515398478	5				NaN	NaN	0	NaN	9315	5069	14385
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14397	40.551	NaN	1485.5	30	0	187.51	0.143	+			8302	EAIRISPTF	9	53	517.2882428766677	1032.5619328201353	2	517.2897338867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EAIRISPTF_	ENSG00000147162|ENST00000373719|OGT;nc|ENSG00000147162|O15294-2|OGT;nc|ENSG00000147162|O15294-3|OGT;nc|ENSG00000147162|O15294-4|OGT	71.87747018426188	0.13267044672804276	5				NaN	NaN	0	NaN	9320	5075	14396
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14402	40.568	NaN	4715.4	30	0	587.11	0.214	+			40639	SVAQLLLSK	9	69	479.80068024511513	957.5868075570303	2	479.8002014160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVAQLLLSK_	ENSG00000073614|ENST00000399788|KDM5A;ENST00000541335.1_1_12:431581-432275:-|nuORF;KDM5A|p.G1200Dfs*9|1|0.28|ENSG00000073614|chr12:307787-307787|T/-|frameshift_variant;KDM5A|p.V1093*|1|0.32|ENSG00000073614|chr12:309905-309905|T/-|frameshift_variant;KDM5A|p.V1093Sfs*20|1|0.21|ENSG00000073614|chr12:309904-309905|-/T|frameshift_variant;nc|ENSG00000073614|P29375-2|KDM5A	73.84112541714126	0.12417958948937492	5				NaN	NaN	0	NaN	9322	5078	14401
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14403	40.572	NaN	1916.7	30	0	358.35	0.034	+			41761	SVSNLVTVF	9	52	483.26869657249534	964.5228402117907	2	483.26910400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVSNLVTVF_	ENSG00000146192|ENST00000274963|FGD2;ENST00000459781.5_1_6:36973566-36979631:+|nuORF;ENST00000464083.5_1_6:36973566-36981682:+|nuORF;ENST00000487975.5_1_6:36973566-36978850:+|nuORF;FGD2|p.K560Qfs*14|1|0.4|ENSG00000146192|chr6:37027495-37027496|-/G|frameshift_variant	74.1650062923329	0.12277912660386392	5				NaN	NaN	0	NaN	9323	5078	14401
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14409	40.586	NaN	1832.2	30	0	401.54	0.153	+			23966	LDTGKKLSDD	10	59	546.2814864456564	NaN	0	546.2817993164062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LDTGKKLSDD_	ENSG00000197694|ENST00000372739|SPTAN1;nc|ENSG00000197694|Q13813-3|SPTAN1;nc|ENSG00000197694|Q13813|SPTAN1	29.170058357718403	0.40439580130713204	5				NaN	NaN	0	NaN	9326	5081	14408
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14414	40.603	NaN	1709.7	30	0	263.71	0.143			+	-1	YVQMAQCY	8	58	511.21009246035544	1020.4056319875109	2	511.2099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_YVQM(Oxidation (M))AQCY_	REV__ENSG00000153339|ENST00000283351|TRAPPC8;REV__nc|ENSG00000153339|Q9Y2L5-2|TRAPPC8;REV__TRAPPC8|p.I1181Lfs*4|1|0.23|ENSG00000153339|chr18:31852462-31852466|ATGAT/-|frameshift_variant	33.51558372728122	0.7005509609380386	5				NaN	NaN	0	NaN	9328	5084	14413
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14428	40.658	NaN	2793.8	30	0	331.89	0.214	+			7944	DSLIAVQLI	9	60	486.29287962808877	970.5712063229776	2	486.7947998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DSLIAVQLI_	ENSG00000172967|ENST00000684488|XKR3;XKR3|p.S385N|1|0.3|ENSG00000172967|chr22:16783845-16783845|C/T|missense_variant	56.72105179125745	0.24094814563026265	5				NaN	NaN	0	NaN	9333	5093	14427
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14429	40.661	NaN	1970.3	30	0	285.75	0.106			+	2003	AKIDLTITY	9	57	519.2979080550699	1036.5812631769397	2	519.2984619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AKIDLTITY_	REV__ENSG00000188771|ENST00000338832|PLET1	87.75429964447693	0.0711966946989736	5				NaN	NaN	0	NaN	9334	5093	14427
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14430	40.663	NaN	924.36	30	0	34.522	0.106				-1	IMVKVNFQ	8	57	497.77337646484375	NaN	0	497.77337646484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_IM(Oxidation (M))VKVNFQ_	ADAM2|p.K715Nfs*36|1|0.06|ENSG00000104755|chr8:39746501-39746501|T/-|frameshift_variant;ENSG00000104755|ENST00000265708|ADAM2;nc|ENSG00000104755|Q99965-2|ADAM2	46.76643321282427	1.7418937515398478	5				NaN	NaN	0	NaN	9335	5093	14427
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14431	40.665	NaN	1829.1	30	0	94.477	0.044	+			9296	EHRRFYEERRK	11	62	535.951904296875	NaN	0	535.951904296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EHRRFYEERRK_	tr|U7SLD7|U7SLD7_FUSNUHelicaseSNFOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01975PE=4SV=1	8.034352218211396	0.456735970842152	5				NaN	NaN	0	NaN	9336	5093	14427
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14437	40.68	NaN	3873.7	30	0	629.03	0.142			+	37325	SLEAAAALLL	10	59	486.29287962808877	970.5712063229776	2	486.29241943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLEAAAALLL_	REV__ACVR1C|p.K333Sfs*7|1|0.22|ENSG00000123612|chr2:157542808-157542808|T/-|frameshift_variant;REV__ENSG00000123612|ENST00000243349|ACVR1C;REV__nc|ENSG00000123612|Q8NER5-2|ACVR1C;REV__nc|ENSG00000123612|Q8NER5-3|ACVR1C	60.97194046774394	0.3570005369683776	5				NaN	NaN	0	NaN	9339	5096	14436
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14441	40.696	NaN	1717	30	0	139.06	0.142	+			3573	ASVAWAVLK	9	58	472.7822544830877	943.5499560329754	2	472.7818908691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASVAWAVLK_	ENSG00000106714|ENST00000297668|CNTNAP3;ENSG00000154529|ENST00000377561|CNTNAP3B;ENSG00000283378|ENST00000636699|CNTNAP3C;nc|ENSG00000154529|Q96NU0-2|CNTNAP3B;nc|ENSG00000283378|Q9BZ76-2|CNTNAP3	122.1759843771914	0.019882474861609503	5				NaN	NaN	0	NaN	9340	5099	14440
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14456	40.751	NaN	1820	30	0	284.83	0.143	+			5479	AVAAFVLYK	9	56	491.2923548394456	980.5701567456912	2	491.7937927246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVAAFVLYK_	CCDC107|p.A74V|1|0.5|ENSG00000159884|chr9:35658690-35658690|C/T|missense_variant;ENSG00000159884|ENST00000426546|CCDC107;nc|ENSG00000159884|Q8WV48-2|CCDC107;nc|ENSG00000159884|Q8WV48-3|CCDC107;nc|ENSG00000159884|Q8WV48-4|CCDC107;nc|ENSG00000159884|Q8WV48-5|CCDC107	54.776311868738084	0.25715957988447635	5				NaN	NaN	0	NaN	9346	5108	14455
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14477	40.825	NaN	1648.4	30	0	173	0.143			+	48817	VVAPPIQRL	9	58	496.8143702693742	NaN	0	496.8142395019531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVAPPIQRL_	REV__ENSG00000066739|ENST00000359933|ATG2B	40.5726180659479	0.27166212580479165	5				NaN	NaN	0	NaN	9355	5120	14476
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14481	40.842	NaN	1202.7	30	0	153.97	0.143	+			13613	GLYLALGAGF	10	49	491.2755432128906	NaN	0	491.2755432128906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GLYLALGAGF_	sp|P09695|TRS1_HCMVAProteinHHLF1OS=Humancytomegalovirus(strainAD169)OX=10360GN=TRS1PE=1SV=1;sp|P09715|IRS1_HCMVAProteinIRS1OS=Humancytomegalovirus(strainAD169)OX=10360GN=IRS1PE=1SV=1;sp|Q6SVX2|TRS1_HCMVMProteinTRS1OS=Humancytomegalovirus(strainMerlin)OX=295027GN=TRS1PE=1SV=1;sp|Q6SW04|IRS1_HCMVMProteinIRS1OS=Humancytomegalovirus(strainMerlin)OX=295027GN=IRS1PE=3SV=1	44.53106598305862	0.34017787621393314	5				NaN	NaN	0	NaN	9356	5123	14480
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14487	40.952	NaN	1816.7	30	0	266.14	0.143	+			4162	ATFFGEVVK	9	50	499.2712967929243	996.5280406526487	2	499.27191162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATFFGEVVK_	ENSG00000183527|ENST00000331573|PSMG1;nc|ENSG00000183527|O95456-2|PSMG1;PSMG1|p.T194Hfs*13|1|0.12|ENSG00000183527|chr21:39178524-39178524|T/-|frameshift_variant	44.377184641726394	0.36891676396732553	5				NaN	NaN	0	NaN	9359	5126	14486
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14507	41.034	NaN	1061.1	30	0	181.01	0.143			+	-1	SLEECALNP	9	53	516.7356426076541	NaN	0	516.7362060546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SLEEC(Carbamidomethyl (C))ALNP_	REV__ENSG00000179832|ENST00000326134|MROH1;REV__ENST00000536221.1_8:145474248-145485625:+|nuORF;REV__nc|ENSG00000179832|Q8NDA8-3|MROH1	34.172542307311794	0.30503706118289736	5				NaN	NaN	0	NaN	9364	5141	14506
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14518	41.083	NaN	1448.5	30	0	475.65	0.144			+	48316	VTFFYFLK	8	58	532.7960609161961	1063.577568899192	2	532.797119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTFFYFLK_	REV__ENSG00000173890|ENST00000355897|GPR160;REV__GPR160|p.I239Yfs*22|5|0.32|ENSG00000173890|chr3:170084681-170084681|A/-|frameshift_variant	60.97194046774394	0.49215940876911696	5				NaN	NaN	0	NaN	9366	5150	14517
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14533	41.151	NaN	1538.7	30	0	105.89	0.214	+			8225	EAELQAKNL	9	57	508.27565942846303	1014.5367659237261	2	508.275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EAELQAKNL_	ENSG00000084234|ENST00000338167|APLP2;nc|ENSG00000084234|Q06481-2|APLP2;nc|ENSG00000084234|Q06481-4|APLP2;nc|ENSG00000084234|Q06481-5|APLP2;nc|ENSG00000084234|Q06481-6|APLP2;nc|ENSG00000084234|Q06481|APLP2	51.19269402634007	0.2889735674168909	5				NaN	NaN	0	NaN	9369	5162	14532
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14534	41.154	NaN	305.26	30	0	45.588	0.031				-1	 	0	24	347.700439453125	NaN	0	347.700439453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9370	5162	14532
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14568	41.28	NaN	1535	30	0	259.66	0.141			+	41415	SVNALFSL	8	45	425.7369781548401	849.4594033764802	2	425.7371826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVNALFSL_	REV__ENSG00000180773|ENST00000326402|SLC36A4;REV__nc|ENSG00000180773|Q6YBV0-2|SLC36A4;REV__SLC36A4|p.N453Ifs*4|1|0.19|ENSG00000180773|chr11:93148694-93148694|T/-|frameshift_variant	93.19546047674547	0.2677966331495483	5				NaN	NaN	0	NaN	9383	5183	14567
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14574	41.299	NaN	1246.3	30	0	147.36	0.142	+			19629	KDIVKLID	8	51	472.294873756065	NaN	0	472.2945251464844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KDIVKLID_	tr|U7SLT6|U7SLT6_FUSNUNitroreductasedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01887PE=3SV=1	49.44154591367651	1.7418937515398478	5				NaN	NaN	0	NaN	9386	5186	14573
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14578	41.316	NaN	1665.4	30	0	178.49	0.142	+			43975	TPFKGGTLF	9	55	484.2660630651101	966.5175731970202	2	484.2657775878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TPFKGGTLF_	nc|ENSG00000120802|P42166|TMPO	58.78195531508484	0.22376836668196862	5				NaN	NaN	0	NaN	9387	5189	14577
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14606	41.436	NaN	1517.1	30	0	509.96	0.142	+			6597	AYMPASIIT	9	45	483.7518442484646	NaN	0	483.75152587890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AYMPASIIT_	FOXK1|p.V503I|1|0.26|ENSG00000164916|chr7:4759406-4759406|G/A|missense_variant	30.503639358989545	0.3235605894931338	5				NaN	NaN	0	NaN	9394	5210	14605
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14611	41.453	NaN	1237.4	30	0	145.3	0.144	+			41251	SVLGQLGITK	10	55	508.3108825683594	NaN	0	508.3108825683594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVLGQLGITK_	ENSG00000197249|ENST00000393087|SERPINA1;ENST00000489769.1_1_14:94844788-94846995:-|nuORF;nc|ENSG00000197249|P01009-2|SERPINA1;SERPINA1|p.L377*|1|0.19|ENSG00000197249|chr14:94378576-94378576|A/-|frameshift_variant;SERPINA1|p.T369Rfs*3|1|0.05|ENSG00000197249|chr14:94378605-94378606|-/CCCC|frameshift_variant	70.72838890466396	0.14666852720906332	5				NaN	NaN	0	NaN	9396	5213	14610
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14631	41.539	NaN	1099.8	30	0	93.356	0.214			+	16101	HDGFRPLS	8	47	464.7337341308594	NaN	0	464.7337341308594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HDGFRPLS_	REV__ENSG00000006025|ENST00000007414|OSBPL7;REV__ENST00000579728.5_1_17:45885659-45892067:-|nuORF;REV__ENST00000583167.5_1_17:45885659-45892067:-|nuORF	31.954861631926434	1.7418937515398478	5				NaN	NaN	0	NaN	9401	5228	14630
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14632	41.542	NaN	1785.6	30	0	183.55	0.036			+	7389	DEALLVTDSE	10	56	546.2600924818147	NaN	0	546.2608642578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DEALLVTDSE_	REV__ENSG00000080200|ENST00000389622|CRYBG3	31.529811441608018	0.39664753963064203	5				NaN	NaN	0	NaN	9402	5228	14630
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14655	41.644	NaN	853.01	30	0	72.953	0.143	+			36272	SENVLQVHL	9	46	519.7829682607907	NaN	0	519.783203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SENVLQVHL_	ENSG00000115947|ENST00000392857|ORC4;ENST00000495601.1_1_2:148716324-148733527:-|nuORF;ENST00000496670.6_1_2:148709144-148730385:-|nuORF;nc|ENSG00000115947|O43929-2|ORC4;nc|ENSG00000115947|O43929-3|ORC4	31.529811441608018	0.3183796599642538	5				NaN	NaN	0	NaN	9407	5246	14654
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14660	41.66	NaN	2173.8	30	0	198.61	0.144			+	17054	HQQKMEIY	8	61	546.7614801958777	1091.5084074585552	2	546.7617797851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_HQQKM(Oxidation (M))EIY_	REV__ENSG00000113318|ENST00000265081|MSH3;REV__MSH3|p.N1020Ifs*40|1|0.46|ENSG00000113318|chr5:80864865-80864865|A/-|frameshift_variant;REV__MSH3|p.N1020Kfs*17|1|0.43|ENSG00000113318|chr5:80864864-80864865|-/A|frameshift_variant;REV__MSH3|p.N861Mfs*6|1|0.43|ENSG00000113318|chr5:80792766-80792766|A/-|frameshift_variant;REV__MSH3|p.V745Ifs*28|1|0.05|ENSG00000113318|chr5:80768981-80768982|-/CATATTCGAAGTTTAT|frameshift_variant	53.351449002276354	0.5676011784961348	5				NaN	NaN	0	NaN	9409	5249	14659
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14723	41.974	NaN	838.41	30	0	76.625	0.143	+			35200	SAIVEIFSK	9	44	497.2842223215615	992.553891709923	2	497.28448486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAIVEIFSK_	ENSG00000050405|ENST00000341247|LIMA1;LIMA1|p.T536Lfs*38|2|0.4|ENSG00000050405|chr12:50177739-50177739|G/-|frameshift_variant;nc|ENSG00000050405|Q9UHB6-4|LIMA1	22.579656572578934	0.5922287541734749	5				NaN	NaN	0	NaN	9415	5306	14722
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14728	41.992	NaN	658.84	30	0	46.301	0.139	+			46994	VKSIKWCKN	9	34	369.21200171633876	NaN	0	369.21173095703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VKSIKWCKN_	ENSG00000185737|ENST00000372141|NRG3;ENST00000555784.5_1_10:84711227-84745358:+|nuORF;nc|ENSG00000185737|P56975-2|NRG3;nc|ENSG00000185737|P56975-3|NRG3;nc|ENSG00000185737|P56975|NRG3;NRG3|p.L694Pfs*18|1|0.26|ENSG00000185737|chr10:82985517-82985518|-/C|frameshift_variant	32.81241826257853	0.3119040447479903	5				NaN	NaN	0	NaN	9417	5309	14727
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14734	42.01	NaN	1278.8	30	0	130.35	0.145	+			14935	GTMEWIMIK	9	53	562.7783047533044	NaN	0	562.7785034179688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_GTM(Oxidation (M))EWIMIK_	ENSG00000168273|ENST00000477703|UQCC5	51.19269402634007	0.19847346126499396	5				NaN	NaN	0	NaN	9420	5312	14733
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14749	42.076	NaN	540.7	30	0	86.926	0.138				-1	 	0	28	322.6266468900801	NaN	0	322.6266784667969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9423	5324	14748
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14759	42.126	NaN	305.86	30	0	33.761	0.138				-1	DHGNFMMP	8	24	322.12762451171875	NaN	0	322.12762451171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_DHGNFM(Oxidation (M))MP_	ENSG00000204406|ENST00000642680|MBD5;MBD5|p.K1195Nfs*22|1|0.23|ENSG00000204406|chr2:148489911-148489911|A/-|frameshift_variant;MBD5|p.L1216*|1|0.14|ENSG00000204406|chr2:148489974-148489974|T/-|frameshift_variant;MBD5|p.P476L|1|0.47|ENSG00000204406|chr2:148469370-148469370|C/T|missense_variant;MBD5|p.Q1196Tfs*30|1|0.33|ENSG00000204406|chr2:148489910-148489911|-/A|frameshift_variant;nc|ENSG00000204406|Q9P267-2|MBD5;nc|ENSG00000204406|Q9P267|MBD5	12.959181472943097	1.7418937515398478	5				NaN	NaN	0	NaN	9424	5333	14758
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14784	42.259	NaN	2487	30	0	262.17	0.214	+			41106	SVINVFVGR	9	60	495.79076805164	989.56698317008	2	495.79229736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVINVFVGR_	ENSG00000135540|ENST00000343505|NHSL1;nc|ENSG00000135540|Q5SYE7|NHSL1;NHSL1|p.E1312Gfs*27|1|0.12|ENSG00000135540|chr6:138430422-138430423|-/C|frameshift_variant;NHSL1|p.I1199Ffs*26|1|0.44|ENSG00000135540|chr6:138430763-138430763|G/-|frameshift_variant;NHSL1|p.P932Rfs*70|1|0.13|ENSG00000135540|chr6:138431562-138431562|G/-|frameshift_variant	54.722347961057174	0.257609425301511	5				NaN	NaN	0	NaN	9425	5357	14783
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14785	42.262	NaN	1669.3	30	0	267.19	0.034	+			37718	SLSVPIIIK	9	53	485.32084671270025	NaN	0	485.3208312988281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLSVPIIIK_	CHRNB1|p.Q341Lfs*49|1|0.23|ENSG00000170175|chr17:7454497-7454498|-/T|frameshift_variant;ENSG00000170175|ENST00000306071|CHRNB1;ENST00000573209.1_1_17:7350776-7358776:+|nuORF;nc|ENSG00000170175|P11230-2|CHRNB1	58.78195531508484	0.1545138866451181	5				NaN	NaN	0	NaN	9426	5357	14783
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14791	42.279	NaN	1399.8	30	0	288.82	0.14				-1	 	0	36	405.80695793966856	809.5993629461371	2	405.80621337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9429	5360	14790
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14796	42.296	NaN	524.47	30	0	24.432	0.14	+			7617	DKERQLRAR	9	35	391.2251343180015	NaN	0	391.22637939453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DKERQLRAR_	ENSG00000141744|ENST00000269582|PNMT;PNMT|p.H210Afs*27|1|0.46|ENSG00000141744|chr17:39670161-39670162|-/G|frameshift_variant;PNMT|p.H210Tfs*20|1|0.23|ENSG00000141744|chr17:39670162-39670162|G/-|frameshift_variant	23.52269567125451	0.3573684076213556	5				NaN	NaN	0	NaN	9431	5363	14795
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14804	42.329	NaN	760.52	30	0	58.594	0.139			+	11056	FENVKKELV	9	45	369.21200171633876	NaN	0	369.21197509765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FENVKKELV_	REV__ENSG00000132972|ENST00000255324|RNF17;REV__nc|ENSG00000132972|Q9BXT8-1|RNF17;REV__nc|ENSG00000132972|Q9BXT8-4|RNF17;REV__nc|ENSG00000132972|Q9BXT8-5|RNF17;REV__RNF17|p.C1288Vfs*21|1|0.1|ENSG00000132972|chr13:24861352-24861352|T/-|frameshift_variant	23.52269567125451	0.3573684076213556	5				NaN	NaN	0	NaN	9433	5369	14803
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14823	42.411	NaN	1280.9	30	0	151.74	0.144	+			16638	HHLSTRCSF	9	51	544.2607520792973	NaN	0	544.260986328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HHLSTRCSF_	ENST00000373115.4_1_10:73772566-73772710:+|nuORF	29.14955571784316	0.3303970763161698	5				NaN	NaN	0	NaN	9437	5384	14822
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14860	42.564	NaN	1818.7	30	0	279.33	0.142			+	7367	DDLGLAALR	9	44	472.26431346859397	942.514074003988	2	472.2641906738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DDLGLAALR_	REV__ENSG00000176624|ENST00000406189|MEX3C	51.33545320467046	0.2872990594074956	5				NaN	NaN	0	NaN	9447	5411	14859
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14882	42.652	NaN	1309.1	30	0	365.08	0.143	+			35356	SAPKIFQAL	9	43	487.7865295410156	NaN	0	487.7865295410156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAPKIFQAL_	ENSG00000064651|ENST00000262461|SLC12A2;nc|ENSG00000064651|P55011-3|SLC12A2;SLC12A2|p.E1119Rfs*7|1|0.47|ENSG00000064651|chr5:128184417-128184418|-/A|frameshift_variant;SLC12A2|p.P1171Sfs*18|1|0.38|ENSG00000064651|chr5:128186498-128186499|-/TC|frameshift_variant	24.519189625965996	0.35377483217337163	5				NaN	NaN	0	NaN	9454	5426	14881
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14901	42.737	NaN	935.66	30	0	53.387	0.139	+			2225	ALSDAFQKLL	10	45	369.2119557341934	NaN	0	369.21221923828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ALSDAFQKLL_	ENSG00000278023|ENST00000620284|RDM1;nc|ENSG00000278023|Q8NG50-12|RDM1;nc|ENSG00000278023|Q8NG50-2|RDM1	28.081489160057373	0.40797012399963245	5				NaN	NaN	0	NaN	9458	5441	14900
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14923	42.85	NaN	1397.9	30	0	296.47	0.142	+			32868	RDEGFITL	8	42	475.75096480684255	949.4873766804851	2	475.7513732910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RDEGFITL_	ENST00000337195.9_1_10:126799584-126849016:-|nuORF	39.252832667884924	0.6609488554722044	5				NaN	NaN	0	NaN	9459	5462	14922
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14937	42.901	NaN	1335.6	30	0	286.23	0.143	+			2321	AMLDTVVFK	9	41	512.2811450733734	1022.5477372135468	2	512.281494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AMLDTVVFK_	ENSG00000115233|ENST00000409682|PSMD14;ENST00000477232.5_1_2:162241962-162267908:+|nuORF;ENST00000492908.1_1_2:162265323-162267908:+|nuORF	49.44154591367651	0.3095138337212152	5				NaN	NaN	0	NaN	9464	5471	14936
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14989	43.149	NaN	4355.6	30	0	196.92	0.154				-1	 	0	85	737.7071502023704	2210.099621207311	3	738.0426635742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9471	5516	14988
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14997	43.182	NaN	1626.2	30	0	181.2	0.144	+			6041	AVMGAYVLLK	10	56	532.8134765625	NaN	0	532.8134765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVMGAYVLLK_	ENSG00000166562|ENST00000587834|SEC11C;ENST00000591406.1_1_18:56822908-56825914:+|nuORF	53.351449002276354	0.2844141321977336	5				NaN	NaN	0	NaN	9473	5522	14996
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15014	43.263	NaN	924.54	30	0	140.1	0.143	+			10683	EYTAKIALL	9	47	511.30044703314854	NaN	0	511.3003234863281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EYTAKIALL_	ENSG00000092820|ENST00000367075|EZR	38.80614096846853	0.28164298475537564	5				NaN	NaN	0	NaN	9475	5537	15013
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15027	43.328	NaN	801.2	30	0	55.288	0.14				-1	 	0	45	391.2253134865781	780.4360740399562	2	391.22509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9476	5549	15026
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15037	43.376	NaN	2607.1	30	0	385.99	0.144	+			255	AAMLDTVVFK	10	62	547.7991679199285	1093.583782906657	2	547.8011474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAMLDTVVFK_	ENSG00000115233|ENST00000409682|PSMD14;ENST00000477232.5_1_2:162241962-162267908:+|nuORF;ENST00000492908.1_1_2:162265323-162267908:+|nuORF	90.60085204095205	0.12763388345653318	5				NaN	NaN	0	NaN	9477	5558	15036
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15042	43.392	NaN	616.01	30	0	45.91	0.14			+	43388	TGGARVKH	8	42	413.23828779817507	NaN	0	413.2381286621094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TGGARVKH_	REV__ENSG00000128591|ENST00000325888|FLNC;REV__FLNC|p.H2471Tfs*58|1|0.18|ENSG00000128591|chr7:128856767-128856767|C/-|frameshift_variant;REV__nc|ENSG00000128591|Q14315-2|FLNC	26.79610172149135	1.7418937515398478	5				NaN	NaN	0	NaN	9479	5561	15041
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15064	43.492	NaN	1757.3	30	0	741.05	0.145	+			11979	FVPCHPNLHL	10	60	588.8004726593205	1175.5863923854408	2	588.8003540039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FVPCHPNLHL_	nc|ENSG00000145819|Q9UNA1|ARHGAP26	42.86426827375447	0.522752283233888	5				NaN	NaN	0	NaN	9483	5579	15063
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15069	43.509	NaN	1587	30	0	235.12	0.143	+			39227	STAIQELFK	9	58	518.7880474630472	NaN	0	518.7880249023438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STAIQELFK_	ENSG00000104833|ENST00000264071|TUBB4A;ENSG00000137267|ENST00000333628|TUBB2A;ENSG00000137285|ENST00000259818|TUBB2B;ENSG00000176014|ENST00000317702|TUBB6;ENSG00000188229|ENST00000340384|TUBB4B;ENSG00000196230|ENST00000327892|TUBB;ENSG00000258947|ENST00000315491|TUBB3;ENST00000417736.2_1_18:12308439-12326126:+|nuORF;ENST00000518096.1_1_8:30210219-30210855:+|nuORF;ENST00000604929.1_1_9:140136931-140138005:+|nuORF;nc|ENSG00000258947|Q13509-2|TUBB3	77.31757898189308	0.08057531075035683	5				NaN	NaN	0	NaN	9485	5582	15068
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15107	43.694	NaN	923.49	30	0	74.879	0.14			+	29357	PAARPRGG	8	40	391.2253134865781	780.4360740399562	2	391.22503662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PAARPRGG_	REV__ENST00000553338.1_1_14:76452171-76452399:+|nuORF	21.70233525837049	0.7917639344264583	5				NaN	NaN	0	NaN	9490	5615	15106
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15120	43.744	NaN	536.69	30	0	244.53	0.138				-1	 	0	21	335.1540997098893	668.2936464865786	2	335.15411376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9494	5624	15119
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15126	43.763	NaN	631.22	30	0	174.57	0.138				-1	 	0	28	327.16511662516893	652.3156803171379	2	327.16534423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9497	5627	15125
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15134	43.797	NaN	1088.5	30	0	68.602	0.144	+			28034	NAAKIFNLY	9	53	527.2904189955116	1052.566285057823	2	527.2919311523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAAKIFNLY_	DPYSL3|p.A516Qfs*15|1|0.31|ENSG00000113657|chr5:147395638-147395638|G/-|frameshift_variant;ENSG00000072832|ENST00000324989|CRMP1;ENSG00000113657|ENST00000343218|DPYSL3;ENSG00000147647|ENST00000351513|DPYS;ENST00000506216.5_1_4:5749932-5890196:-|nuORF;ENST00000511535.1_1_4:5823489-5889136:-|nuORF;nc|ENSG00000072832|Q14194|CRMP1;nc|ENSG00000113657|Q14195|DPYSL3	51.33545320467046	0.2872990594074956	5				NaN	NaN	0	NaN	9499	5633	15133
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15149	43.865	NaN	1186.3	30	0	157.36	0.143	+			4183	ATFMEVLTK	9	49	520.2785589885124	1038.5425650438247	2	520.280517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATFMEVLTK_	ENSG00000196712|ENST00000358273|NF1;ENST00000493220.5_2_17:29556858-29657521:+|nuORF;ENST00000495910.6_1_17:29490228-29576996:+|nuORF;nc|ENSG00000196712|P21359-2|NF1;nc|ENSG00000196712|P21359-4|NF1;nc|ENSG00000196712|P21359-6|NF1;NF1|p.F2429Qfs*7|1|0.17|ENSG00000196712|chr17:31349214-31349215|-/CAAGTAAGAATTAATT|frameshift_variant;NF1|p.K1386Rfs*20|1|0.33|ENSG00000196712|chr17:31252978-31252978|A/-|frameshift_variant	45.97224482568171	0.3502073465782774	5				NaN	NaN	0	NaN	9502	5645	15148
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15174	43.997	NaN	350.73	30	0	43.775	0.138	+			6120	AVPCGSGG	8	26	324.1431447315298	NaN	0	324.14337158203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVPCGSGG_	ENST00000431489.5_1_2:62932928-62934072:+|nuORF	15.63621529709179	1.7418937515398478	5				NaN	NaN	0	NaN	9503	5669	15173
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15191	44.08	NaN	930.07	30	0	77.09	0.14	+			32729	RAPAPRGG	8	46	391.2253134865781	780.4360740399562	2	391.22540283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RAPAPRGG_	ENSG00000261308|ENST00000618634|FIGNL2	26.79610172149135	0.7524337208463756	5				NaN	NaN	0	NaN	9505	5684	15190
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15249	44.362	NaN	489.21	30	0	37.705	0.141			+	28892	NQIITIVP	8	27	449.2738342285156	NaN	0	449.2738342285156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NQIITIVP_	REV__ENST00000407538.2_1_6:141243712-141243922:-|nuORF	33.51558372728122	1.7418937515398478	5				NaN	NaN	0	NaN	9512	5735	15248
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15281	44.524	NaN	1259.5	30	0	100.65	0.145			+	51245	YQHYSTLPGV	10	47	582.7899169921875	NaN	0	582.7899169921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YQHYSTLPGV_	REV__ENSG00000111305|ENST00000651961|GSG1;REV__nc|ENSG00000111305|Q2KHT4-2|GSG1;REV__nc|ENSG00000111305|Q2KHT4-3|GSG1;REV__nc|ENSG00000111305|Q2KHT4-5|GSG1;REV__nc|ENSG00000111305|Q2KHT4-6|GSG1;REV__nc|ENSG00000111305|Q2KHT4-8|GSG1;REV__nc|ENSG00000111305|Q2KHT4|GSG1	24.519189625965996	0.41966695327750003	5				NaN	NaN	0	NaN	9514	5765	15280
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15306	44.651	NaN	629.04	30	0	39.509	0.14			+	32734	RAPAPRSA	8	42	413.23840445672835	824.4622559802567	2	413.2389831542969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RAPAPRSA_	REV__ENST00000317089.9_1_16:47007413-47007584:-|nuORF	30.503639358989545	0.7238069182250283	5				NaN	NaN	0	NaN	9515	5789	15305
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15377	44.996	NaN	861.28	30	0	44.48	0.14			+	3279	ASLPLPDL	8	52	413.23838597474474	NaN	0	413.23828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASLPLPDL_	REV__ENST00000300952.6_1_19:1258292-1258616:+|nuORF	38.80614096846853	1.7418937515398478	5				NaN	NaN	0	NaN	9523	5852	15376
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15385	45.029	NaN	2429.2	30	0	502.16	0.143	+			2098	ALFLTLTTK	9	54	504.31094652176967	1006.6073401103394	2	504.3097839355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ALFLTLTTK_	ENSG00000198712|ENST00000361739|MT-CO2	87.69643885390035	0.07135982304947239	5				NaN	NaN	0	NaN	9525	5858	15384
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15415	45.176	NaN	622.66	30	0	107.63	0.138	+			24982	LLDLNPQSI	9	35	338.1936150264138	NaN	0	338.1932678222656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LLDLNPQSI_	ENSG00000100280|ENST00000357586|AP1B1;nc|ENSG00000100280|Q10567-2|AP1B1;nc|ENSG00000100280|Q10567-3|AP1B1;nc|ENSG00000100280|Q10567-4|AP1B1	17.364965105453717	0.37820932774828947	5				NaN	NaN	0	NaN	9528	5885	15414
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15442	45.306	NaN	1007	30	0	66.736	0.144			+	19095	IYITHNPRT	9	52	557.8024262734241	1113.590299613648	2	558.3057250976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IYITHNPRT_	REV__ENSG00000077312|ENST00000243563|SNRPA;REV__ENST00000598923.1_1_19:41257313-41268988:+|nuORF;REV__ENST00000599570.5_1_19:41257313-41263396:+|nuORF;REV__SNRPA|p.V133Wfs*15|1|0.34|ENSG00000077312|chr19:40759576-40759576|C/-|frameshift_variant	24.519189625965996	0.574102787014149	5				NaN	NaN	0	NaN	9531	5909	15441
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15449	45.34	NaN	998.26	30	0	56.487	0.14			+	4832	ATPGARRP	8	47	413.2383465454335	NaN	0	413.238525390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATPGARRP_	REV__ENSG00000173171|ENST00000368376|MTX1;REV__MTX1|p.W163Lfs*69|1|0.19|ENSG00000173171|chr1:155209284-155209285|-/G|frameshift_variant;REV__nc|ENSG00000173171|Q13505-2|MTX1	25.450171626174864	1.7418937515398478	5				NaN	NaN	0	NaN	9532	5915	15448
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15454	45.357	NaN	493.94	30	0	86.118	0.139			+	-1	LSAGPPGG	8	33	349.17832778928005	NaN	0	349.17840576171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LSAGPPGG_	REV__ENST00000396077.7_1_3:44492843-44496619:-|nuORF	29.841539824830324	1.7418937515398478	5				NaN	NaN	0	NaN	9534	5918	15453
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15486	45.51	NaN	498.01	30	0	255.68	0.138			+	12295	GCGPLGLG	8	18	337.16958696328805	NaN	0	337.1694030761719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GCGPLGLG_	REV__ENST00000345146.6_1_2:209116282-209119789:-|nuORF	16.704963439144045	1.7418937515398478	5				NaN	NaN	0	NaN	9539	5945	15485
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15495	45.546	NaN	504.46	30	0	91.914	0.214			+	30123	PRRAEGSGR	9	21	329.18079558718375	NaN	0	329.18084716796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PRRAEGSGR_	REV__ENSG00000214193|ENST00000453908|SH3D21;REV__SH3D21|p.H471Tfs*31|1|0.4|ENSG00000214193|chr1:36320403-36320403|C/-|frameshift_variant	12.811709888998246	0.3936198799427492	5				NaN	NaN	0	NaN	9542	5951	15494
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15496	45.55	NaN	413.65	30	0	53.45	0.031	+			14041	GSGTGGAW	8	34	346.6548524961645	NaN	0	346.65484619140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSGTGGAW_	ENST00000298585.2_1_9:140481500-140482232:-|nuORF	14.664097394203935	1.7418937515398478	5				NaN	NaN	0	NaN	9543	5951	15494
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15501	45.565	NaN	924.36	30	0	133.98	0.142				-1	KEKTTVTM	8	45	477.25101985571314	NaN	0	477.2508850097656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_KEKTTVTM(Oxidation (M))_	ENSG00000136040|ENST00000258526|PLXNC1;PLXNC1|p.D901Rfs*10|1|0.03|ENSG00000136040|chr12:94248333-94248334|-/G|frameshift_variant;PLXNC1|p.I1400Sfs*21|1|0.37|ENSG00000136040|chr12:94298749-94298749|A/-|frameshift_variant;PLXNC1|p.L809*|1|0.11|ENSG00000136040|chr12:94247936-94247936|T/-|frameshift_variant	40.77816245573522	1.7418937515398478	5				NaN	NaN	0	NaN	9545	5954	15500
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15515	45.632	NaN	2509	30	0	415.85	0.143	+			41306	SVLNLVIVK	9	51	492.826527641256	983.638502349312	2	492.8270568847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVLNLVIVK_	ENSG00000137154|ENST00000380394|RPS6;ENST00000464444.1_1_19:13005132-13005321:+|nuORF	112.41091882917199	0.026537921851008135	5				NaN	NaN	0	NaN	9547	5966	15514
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15529	45.7	NaN	1165.7	30	0	121.73	0.144	+			49590	VYGFLRNGF	9	50	536.7828513325228	1071.5511497318455	2	536.7828369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYGFLRNGF_	ENST00000343327.6_1_9:115030452-115095785:-|nuORF	69.6276240434122	0.14239879520340665	5				NaN	NaN	0	NaN	9549	5978	15528
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15556	45.835	NaN	2189.3	30	0	437.91	0.141	+			50906	YGGGFGGGGF	10	50	438.18801990024974	874.3614868672995	2	438.18804931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YGGGFGGGGF_	CON__P02535-1;REV__CON__Q6IFZ6	136.43501155739278	0.011704589207341916	5				NaN	NaN	0	NaN	9552	6002	15555
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15573	45.917	NaN	1013.3	30	0	53.709	0.141	+			50183	WLLPRAGG	8	52	435.25134367335403	NaN	0	435.2511291503906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WLLPRAGG_	nc|ENSG00000272681|A6NKX1|FAM223B;nc|ENSG00000279245|Q8IWN6|FAM223A	21.70233525837049	1.7418937515398478	5				NaN	NaN	0	NaN	9554	6017	15572
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15608	46.093	NaN	1421.4	30	0	267.51	0.143	+			29294	NYISGIQTI	9	45	504.771684918109	1007.528816903018	2	504.7723388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NYISGIQTI_	ENSG00000189091|ENST00000302516|SF3B3;nc|ENSG00000189091|Q15393-3|SF3B3	49.536043120802724	0.308405419312776	5				NaN	NaN	0	NaN	9556	6050	15607
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15648	46.273	NaN	1070.5	30	0	244.79	0.214			+	42584	TASSLFLHL	9	46	494.77700512802636	NaN	0	494.7776794433594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TASSLFLHL_	REV__ENSG00000152463|ENST00000378228|OLAH;REV__nc|ENSG00000152463|Q9NV23-2|OLAH;REV__OLAH|p.K164Sfs*10|2|0.24|ENSG00000152463|chr10:15065666-15065666|C/-|frameshift_variant;REV__OLAH|p.N251Ifs*6|1|0.13|ENSG00000152463|chr10:15073182-15073183|-/TTGTATTC|frameshift_variant	76.84663266511073	0.08218905260741291	5				NaN	NaN	0	NaN	9563	6083	15647
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15649	46.276	NaN	1057.7	30	0	80.487	0.033	+			50184	WLLPRAGG	8	51	435.25134367335403	NaN	0	435.2513732910156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WLLPRAGG_	nc|ENSG00000272681|A6NKX1|FAM223B;nc|ENSG00000279245|Q8IWN6|FAM223A	29.841539824830324	1.7418937515398478	5				NaN	NaN	0	NaN	9564	6083	15647
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15741	46.728	NaN	496.37	30	0	30.892	0.214	+			25737	LRVGRGPD	8	28	435.25103759765625	NaN	0	435.25103759765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LRVGRGPD_	ENST00000419783.1_2_3:49395567-49395990:-|nuORF	19.359975847455235	1.7418937515398478	5				NaN	NaN	0	NaN	9572	6167	15740
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15742	46.732	NaN	1196.2	30	0	156.02	0.035	+			4307	ATGILGAVFK	10	51	488.7953056319183	975.5760583306367	2	488.7945861816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATGILGAVFK_	ENSG00000127324|ENST00000247829|TSPAN8;ENST00000552128.2_1_12:71519116-71532942:-|nuORF	47.657333605630114	0.47858658696240314	5				NaN	NaN	0	NaN	9573	6167	15740
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15795	46.993	NaN	887.01	30	0	72.676	0.142			+	28610	NKRSPQAL	8	46	457.2645501163448	912.5145472994897	2	457.2647705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NKRSPQAL_	REV__PTPN6|p.R30Q|1|0.13|ENSG00000111679|chr12:6951689-6951689|G/A|missense_variant	30.503639358989545	0.7238069182250283	5				NaN	NaN	0	NaN	9578	6215	15794
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15862	47.331	NaN	1064.4	30	0	71.113	0.142			+	34601	RVNLAGAVN	9	51	457.2645501163448	912.5145472994897	2	457.2646179199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVNLAGAVN_	REV__tr|U7T468|U7T468_FUSNUDNAtopoisomeraseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00277PE=3SV=1	29.14955571784316	0.5308295550522326	5				NaN	NaN	0	NaN	9582	6278	15861
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15914	47.59	NaN	860.91	30	0	84.5	0.143			+	45159	TVLVSTLLAT	10	46	509.3132712338438	NaN	0	509.31292724609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVLVSTLLAT_	REV__ENSG00000181143|ENST00000397910|MUC16;REV__MUC16|p.F10843Sfs*11|1|0.22|ENSG00000181143|chr19:8938427-8938427|A/-|frameshift_variant;REV__MUC16|p.K6604Rfs*26|1|0.27|ENSG00000181143|chr19:8956959-8956959|T/-|frameshift_variant;REV__MUC16|p.L8270Wfs*63|1|0.04|ENSG00000181143|chr19:8951962-8951963|-/ACCA|frameshift_variant;REV__MUC16|p.N9430Tfs*13|1|0.14|ENSG00000181143|chr19:8948481-8948481|T/-|frameshift_variant;REV__MUC16|p.S6098Wfs*23|1|0.17|ENSG00000181143|chr19:8958477-8958478|-/GGTGACATCTCTTGGCCAACTGACCCTGGACACATCAACC|frameshift_variant;REV__MUC16|p.S6614Lfs*30|1|0.04|ENSG00000181143|chr19:8956931-8956932|-/A|frameshift_variant;REV__MUC16|p.S7713Lfs*5|1|0.45|ENSG00000181143|chr19:8953634-8953634|G/-|frameshift_variant;REV__MUC16|p.T7968Nfs*2|1|0.41|ENSG00000181143|chr19:8952867-8952868|-/T|frameshift_variant;REV__MUC16|p.T8791Qfs*38|1|0.31|ENSG00000181143|chr19:8950403-8950403|G/-|frameshift_variant	26.69291269510374	0.4125295221340092	5				NaN	NaN	0	NaN	9586	6326	15913
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15955	47.797	NaN	636.04	30	0	43.786	0.142	+			2328	AMLPPLKSG	9	42	457.2643028265353	NaN	0	457.264404296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AMLPPLKSG_	ENSG00000074755|ENST00000381638|ZZEF1;ENST00000572426.5_1_17:3937307-3974023:-|nuORF;nc|ENSG00000074755|O43149-2|ZZEF1;ZZEF1|p.A2094T|1|0.37|ENSG00000074755|chr17:4042455-4042455|C/T|missense_variant;ZZEF1|p.K2387Sfs*40|1|0.38|ENSG00000074755|chr17:4022761-4022761|T/-|frameshift_variant	19.359975847455235	0.3714571876404798	5				NaN	NaN	0	NaN	9588	6365	15954
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16024	48.139	NaN	1059.8	30	0	80.194	0.142			+	34729	RWAGGRVR	8	62	479.27795793852744	956.5413629438549	2	479.7794189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RWAGGRVR_	REV__ENST00000322177.5_1_15:75249143-75249248:-|nuORF	33.51558372728122	0.7005509609380386	5				NaN	NaN	0	NaN	9594	6428	16023
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16095	48.483	NaN	1178.3	30	0	99.071	0.142	+			47581	VRNTNQIL	8	53	479.27795793852744	956.5413629438549	2	479.2778015136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VRNTNQIL_	RNF6|p.R297I|1|0.13|ENSG00000127870|chr13:26214992-26214992|C/A|missense_variant	31.954861631926434	0.7126016770032289	5				NaN	NaN	0	NaN	9602	6491	16094
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16127	48.645	NaN	1006.9	30	0	150.33	0.141	+			44476	TSQTLLLL	8	41	444.7740141824333	NaN	0	444.773681640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSQTLLLL_	ENSG00000103047|ENST00000261778|TANGO6;ENST00000564180.1_1_16:68877520-68901131:+|nuORF	85.35947970620816	1.7418937515398478	5				NaN	NaN	0	NaN	9604	6521	16126
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16208	49.047	NaN	914.64	30	0	72.808	0.143	+			36647	SGLLIRGQTG	10	48	501.29072589937306	1000.5668988655461	2	501.2918701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SGLLIRGQTG_	ENST00000586719.5_1_19:12883476-12885666:-|nuORF;ENST00000589134.5_1_19:12885194-12886263:-|nuORF;ENST00000589965.5_1_19:12876298-12886263:-|nuORF;ENST00000590839.5_1_19:12883046-12889158:-|nuORF	25.125986553469783	0.6746423231557295	5				NaN	NaN	0	NaN	9610	6596	16207
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16268	49.328	NaN	922.95	30	0	487.07	0.138				-1	 	0	28	340.2594834665852	NaN	0	340.25933837890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9619	6647	16267
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16285	49.396	NaN	1153.7	30	0	44.659	0.143	+			17238	HVSRHLRP	8	53	501.29072589937306	1000.5668988655461	2	501.2908630371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HVSRHLRP_	ENSG00000180921|ENST00000388913|FAM83H;FAM83H|p.G365Afs*180|1|0.14|ENSG00000180921|chr8:143728367-143728367|C/-|frameshift_variant	18.324413293986947	0.7971860551947066	5				NaN	NaN	0	NaN	9624	6659	16284
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16324	49.566	NaN	1273.3	30	0	737.09	0.141				-1	 	0	35	428.691173200068	855.3677934669361	2	428.691162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9633	6689	16323
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16340	49.622	NaN	917.26	30	0	404.21	0.141	+			7669	DLCNGVDH	8	35	436.6802062988281	NaN	0	436.6802062988281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DLCNGVDH_	ENSG00000124159|ENST00000372756|MATN4;nc|ENSG00000124159|O95460-3|MATN4;nc|ENSG00000124159|O95460-4|MATN4;nc|ENSG00000124159|O95460|MATN4	12.959181472943097	1.7418937515398478	5				NaN	NaN	0	NaN	9640	6698	16339
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16398	49.903	NaN	770.36	30	0	91.299	0.143	+			34476	RVASPTSGVK	10	48	501.29072589937306	1000.5668988655461	2	501.2908630371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVASPTSGVK_	ENSG00000185950|ENST00000375856|IRS2	25.125986553469783	0.6746423231557295	5				NaN	NaN	0	NaN	9647	6749	16397
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16422	50.005	NaN	871.6	30	0	55.261	0.143	+			32543	QVSSVRIVSA	10	54	523.3041247420124	1044.5936965508247	2	523.3048706054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QVSSVRIVSA_	ENSG00000152409|ENST00000396137|JMY;nc|ENSG00000152409|Q8N9B5-2|JMY	21.68575002086885	0.7027366847906487	5				NaN	NaN	0	NaN	9653	6767	16421
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16491	50.345	NaN	1370.7	30	0	80.569	0.143			+	26865	LWASRTRR	8	62	523.3041247420124	1044.5936965508247	2	523.3040161132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LWASRTRR_	REV__ENSG00000087494|ENST00000545234|PTHLH;REV__nc|ENSG00000087494|P12272-2|PTHLH;REV__nc|ENSG00000087494|P12272-3|PTHLH	40.5726180659479	0.6527593143185008	5				NaN	NaN	0	NaN	9659	6830	16490
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16570	50.731	NaN	1168.1	30	0	54.637	0.143	+			50154	WKKDIVVAS	9	58	523.3042282748105	1044.593903616421	2	523.3057861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WKKDIVVAS_	ENSG00000075702|ENST00000401500|WDR62;ENST00000378860.8_1_19:36545867-36564559:+|nuORF;nc|ENSG00000075702|O43379-2|WDR62;nc|ENSG00000075702|O43379-3|WDR62;nc|ENSG00000075702|O43379|WDR62	23.04248740728303	0.5879033540491928	5				NaN	NaN	0	NaN	9666	6902	16569
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16605	50.907	NaN	1072.3	30	0	84.087	0.144	+			21696	KQFRIRQN	8	57	545.3176721116241	NaN	0	545.3170776367188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KQFRIRQN_	ENST00000414857.5_2_2:203776999-203782638:+|nuORF;ENST00000466202.5_1_7:123152389-123172522:-|nuORF	19.359975847455235	1.7418937515398478	5				NaN	NaN	0	NaN	9668	6935	16604
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16673	51.245	NaN	1412.6	30	0	81.483	0.144	+			33310	RGRRTAKSSA	10	57	545.3176721116241	NaN	0	545.3186645507812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RGRRTAKSSA_	ENSG00000153071|ENST00000320816|DAB2;nc|ENSG00000153071|P98082-3|DAB2	28.081489160057373	0.40797012399963245	5				NaN	NaN	0	NaN	9673	6998	16672
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16836	52.053	NaN	1479.8	30	0	75.815	0.145			+	-1	LSILFAVKMA	10	61	567.832763671875	NaN	0	567.832763671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LSILFAVKMA_	REV__ENSG00000182195|ENST00000370526|LDOC1;REV__LDOC1|p.D85N|2|0.46|ENSG00000182195|chrX:141176769-141176769|C/T|missense_variant	19.996771675451527	0.4201028297492154	5				NaN	NaN	0	NaN	9686	7148	16835
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16840	52.069	NaN	1091.5	30	0	653.75	0.14			+	-1	MACEDVDETC	10	24	396.80156452807546	NaN	0	396.8018798828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))AC(Carbamidomethyl (C))EDVDETC_	REV__ENSG00000134250|ENST00000256646|NOTCH2;REV__NOTCH2|p.A1083Sfs*17|1|0.17|ENSG00000134250|chr1:119937947-119937948|-/T|frameshift_variant;REV__NOTCH2|p.D437Mfs*9|1|0.09|ENSG00000134250|chr1:119967577-119967577|C/-|frameshift_variant;REV__NOTCH2|p.I2304Hfs*9|1|0.38|ENSG00000134250|chr1:119915812-119915813|-/G|frameshift_variant;REV__NOTCH2|p.S1419Afs*8|1|0.27|ENSG00000134250|chr1:119925562-119925562|G/-|frameshift_variant;REV__NOTCH2|p.V1697Gfs*9|1|0.37|ENSG00000134250|chr1:119922359-119922360|-/C|frameshift_variant	12.206681093483082	0.4201028297492154	5				NaN	NaN	0	NaN	9687	7151	16839
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16924	52.487	NaN	754.27	30	0	77.295	0.145			+	33664	RNGMLFILGL	10	51	567.330810546875	NaN	0	567.330810546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RNGMLFILGL_	REV__ENSG00000186675|ENST00000373359|MAGEE2	23.04248740728303	0.42010282974921537	5				NaN	NaN	0	NaN	9693	7229	16923
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2143	11.337	NaN	4991.9	30	0	3417.3	0.143	+			17967	IGVFKVPLK	9	29	500.8306701269515	999.646787320703	2	500.8294677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IGVFKVPLK_	tr|U7STN9|U7STN9_FUSNUGlucose-1-phosphateadenylyltransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=glgCPE=3SV=1	12.206847966760668	0.6112419832031292	5				NaN	NaN	0	NaN	1	2140	2142
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2148	11.353	NaN	7853	30	0	5315.3	0.143	+			4846	ATPKKSIKK	9	29	334.2225952191262	999.6459562575787	3	334.2220153808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATPKKSIKK_	ENSG00000124575|ENST00000244534|H1-3	13.45404412870281	0.6112419832031293	5				NaN	NaN	0	NaN	3	2143	2147
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2153	11.37	NaN	1521	30	0	198.74	0.145	+			18750	ITLASESQHI	10	31	549.7915478303061	1097.568542727412	2	549.7908935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ITLASESQHI_	ENSG00000262209|ENST00000576222|PCDHGB3;nc|ENSG00000262209|Q9Y5G1-2|PCDHGB3	24.519189625965996	0.6795976720565101	5				NaN	NaN	0	NaN	5	2146	2152
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2157	11.386	NaN	993.77	30	0	512.45	0.143			+	18888	IVILYFKE	8	13	512.808261725832	NaN	0	512.8077392578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IVILYFKE_	REV__DMXL1|p.F1668Lfs*15|1|0.41|ENSG00000172869|chr5:119166644-119166644|T/-|frameshift_variant;REV__DMXL1|p.L1702Sfs*11|1|0.37|ENSG00000172869|chr5:119166742-119166743|-/T|frameshift_variant;REV__DMXL1|p.N1661Tfs*4|1|0.37|ENSG00000172869|chr5:119166621-119166621|A/-|frameshift_variant;REV__DMXL1|p.N3021Mfs*3|1|0.28|ENSG00000172869|chr5:119247193-119247193|A/-|frameshift_variant;REV__DMXL1|p.S1844Vfs*9|1|0.1|ENSG00000172869|chr5:119170317-119170317|A/-|frameshift_variant;REV__ENSG00000172869|ENST00000539542|DMXL1;REV__ENST00000512281.1_1_5:118470015-118483170:+|nuORF;REV__nc|ENSG00000172869|Q9Y485|DMXL1	4.6817480819748125	1.7418937515398478	5				NaN	NaN	0	NaN	6	2149	2156
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2197	11.59	NaN	11751	30	0	3671.3	0.142	+			3512	ASSKDAIKK	9	64	474.2803489205102	946.5461449078205	2	474.2799987792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASSKDAIKK_	DSTN|p.Y117H|1|0.26|ENSG00000125868|chr20:17604592-17604592|T/C|missense_variant;ENSG00000125868|ENST00000246069|DSTN;ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000400899.2_1_1:11051144-11051557:-|nuORF;ENST00000530945.1_1_11:65623104-65623215:-|nuORF;nc|ENSG00000125868|P60981-2|DSTN;nc|ENSG00000165410|Q9Y281-3|CFL2	79.48907831485694	0.09975780661107167	5				NaN	NaN	0	NaN	7	2188	2196
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2202	11.608	NaN	15651	30	0	3554.4	0.214				-1	 	0	60	523.2408938886342	1044.4672348440683	2	523.240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9	2191	2201
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2203	11.611	NaN	3844.2	30	0	1596.4	0.106			+	-1	LMIQSSYK	8	36	493.2543485829044	984.4941442326088	2	493.2531433105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LM(Oxidation (M))IQSSYK_	REV__ENSG00000048405|ENST00000265827|ZNF800;REV__ZNF800|p.A642Vfs*8|1|0.04|ENSG00000048405|chr7:127373411-127373412|-/A|frameshift_variant;REV__ZNF800|p.K544Sfs*9|1|0.12|ENSG00000048405|chr7:127373705-127373705|T/-|frameshift_variant;REV__ZNF800|p.N449Ifs*53|1|0.37|ENSG00000048405|chr7:127373990-127373990|T/-|frameshift_variant	27.882242232435846	0.7440473649773525	5				NaN	NaN	0	NaN	10	2191	2201
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2204	11.613	NaN	5521.6	30	0	3404.4	0.035				-1	SSVSEVMKE	9	27	506.2389703643863	1010.4633877955727	2	506.2377014160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_SSVSEVM(Oxidation (M))KE_	ENSG00000132305|ENST00000410111|IMMT;ENST00000474969.5_1_2:86385703-86422514:-|nuORF;ENST00000486633.1_1_2:86400704-86422514:-|nuORF;nc|ENSG00000132305|Q16891-2|IMMT;nc|ENSG00000132305|Q16891-3|IMMT;nc|ENSG00000132305|Q16891-4|IMMT	20.94693142431847	0.6074874384046576	5				NaN	NaN	0	NaN	11	2191	2201
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2211	11.63	NaN	19370	30	0	7043.4	0.214	+			32170	QSRKRGHT	8	71	485.2686266297313	968.5227003262626	2	485.2678527832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QSRKRGHT_	PDS5B|p.R1248Q|1|0.23|ENSG00000083642|chr13:32770239-32770239|G/A|missense_variant	58.78195531508484	0.5138399468736706	5				NaN	NaN	0	NaN	15	2194	2210
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2212	11.633	NaN	63902	30	0	34925	0.106				-1	 	0	99	334.88595817255936	1001.6360451178781	3	334.8853759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	16	2194	2210
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2213	11.635	NaN	15400	30	0	5919	0.106				-1	VVGLCLMGM	9	45	506.2389703643863	1010.4633877955727	2	506.23681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),2 Oxidation (M)	_VVGLC(Carbamidomethyl (C))LM(Oxidation (M))GM(Oxidation (M))_	ENSG00000078081|ENST00000265598|LAMP3	21.70233525837049	0.6004277881119521	5				NaN	NaN	0	NaN	17	2194	2210
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2214	11.637	NaN	33844	30	0	18925	0.106			+	34320	RTNARPRR	8	61	513.8045258297077	1025.5944987262153	2	513.8038330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RTNARPRR_	REV__ENST00000560141.2_1_15:45023912-45024338:+|nuORF	44.116797842482775	0.6307669463330267	5				NaN	NaN	0	NaN	18	2194	2210
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2215	11.639	NaN	10321	30	0	6444.5	0.106			+	46948	VKCSSLIDE	9	38	497.25046721921973	992.4863815052395	2	497.2495422363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VKCSSLIDE_	REV__ENSG00000165304|ENST00000298048|MELK;REV__nc|ENSG00000165304|Q14680-2|MELK;REV__nc|ENSG00000165304|Q14680-3|MELK;REV__nc|ENSG00000165304|Q14680-4|MELK;REV__nc|ENSG00000165304|Q14680-5|MELK;REV__nc|ENSG00000165304|Q14680-6|MELK;REV__nc|ENSG00000165304|Q14680-7|MELK;REV__nc|ENSG00000165304|Q14680-8|MELK	20.94693142431847	0.6074874384046576	5				NaN	NaN	0	NaN	19	2194	2210
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2216	11.641	NaN	9554.2	30	0	3849.4	0.106			+	-1	MYKSGMTAF	9	53	534.2319791863923	1066.4494054395846	2	534.2311401367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Oxidation (M)	_M(Oxidation (M))YKSGM(Oxidation (M))TAF_	REV__tr|U7T2I7|U7T2I7_FUSNUPhosphateacyltransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=plsXPE=3SV=1	25.57405402267927	0.5642445186134241	5				NaN	NaN	0	NaN	20	2194	2210
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2217	11.642	NaN	1666.3	30	0	266.61	0.034			+	38375	SRSQEVQK	8	52	481.2576081852275	960.5006634372551	2	481.2559509277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SRSQEVQK_	REV__nc|ENSG00000292372|Q9NQA3|WASH6P	73.97473282117947	0.3737790450121076	5				NaN	NaN	0	NaN	21	2194	2210
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2228	11.667	NaN	2871.8	30	0	1409.3	0.214				-1	 	0	31	323.7158508300781	NaN	0	323.7158508300781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	29	2197	2227
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2229	11.671	NaN	3332	30	0	577.93	0.106				-1	RARACQLPE	9	51	550.7861447343191	1099.5577365354382	2	550.7852172851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_RARAC(Carbamidomethyl (C))QLPE_	ENST00000273038.7_1_3:11600288-11600870:-|nuORF	27.882242232435846	0.5426732730940306	5				NaN	NaN	0	NaN	30	2197	2227
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2230	11.673	NaN	2037.6	30	0	1067.2	0.106			+	46036	VAYRIYKQ	8	15	520.799072265625	NaN	0	520.799072265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VAYRIYKQ_	REV__ENSG00000167264|ENST00000565263|DUS2	4.316272785109212	1.7418937515398478	5				NaN	NaN	0	NaN	31	2197	2227
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2231	11.675	NaN	1971.5	30	0	1007.7	0.106	+			17066	HREKPGTFY	9	15	567.7889492620207	1133.5633455908412	2	567.7882690429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HREKPGTFY_	ALMS1|p.L2987Ffs*8|1|0.38|ENSG00000116127|chr2:73490911-73490911|T/-|frameshift_variant;ALMS1|p.S3695Afs*27|1|0.24|ENSG00000116127|chr2:73572954-73572954|A/-|frameshift_variant;ENSG00000116127|ENST00000613296|ALMS1;nc|ENSG00000116127|Q8TCU4-2|ALMS1;nc|ENSG00000116127|Q8TCU4-3|ALMS1	12.206847966760668	0.6112419832031292	5				NaN	NaN	0	NaN	32	2197	2227
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2232	11.677	NaN	988.88	30	0	701.15	0.106			+	21346	KLYINNQY	8	13	528.2807006835938	NaN	0	528.2807006835938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KLYINNQY_	REV__ENSG00000078098|ENST00000188790|FAP;REV__ENST00000480838.1_1_2:163066458-163099837:-|nuORF	6.735540347417125	1.7418937515398478	5				NaN	NaN	0	NaN	33	2197	2227
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2233	11.678	NaN	551.23	30	0	91.18	0.106			+	44232	TRRVALVLG	9	28	328.8815612792969	NaN	0	328.8815612792969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TRRVALVLG_	REV__PITPNM3|p.M410V|1|0.31|ENSG00000091622|chr17:6474462-6474462|T/C|missense_variant	29.170058357718403	0.3302935627494407	5				NaN	NaN	0	NaN	34	2197	2227
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2234	11.68	NaN	569.75	30	0	90.994	0.035			+	-1	LMILIKKQ	8	27	501.82440185546875	NaN	0	501.82440185546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_LM(Oxidation (M))ILIKKQ_	REV__tr|U7SUC4|U7SUC4_FUSNUCBSdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01375PE=4SV=1	21.70233525837049	1.7418937515398478	5				NaN	NaN	0	NaN	35	2197	2227
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2262	11.82	NaN	2250.4	30	0	542.54	0.142			+	47195	VLWLSPLK	8	43	478.302040892887	954.5895288525741	2	478.3004455566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VLWLSPLK_	REV__L1MB2_dup2034|chr4:98891323-98891802:+|1.234255234257108|0.2358614318871796|2.39|479.0|28|2|anti-sense	44.53106598305862	0.628196326904373	5				NaN	NaN	0	NaN	36	2224	2261
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2266	11.836	NaN	2224.9	30	0	408.61	0.144			+	32568	QVYGLYAKQ	9	55	535.2873008713606	1068.560048809521	2	535.2861938476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QVYGLYAKQ_	REV__tr|U7ST90|U7ST90_FUSNUYkuDdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01333PE=4SV=1	60.97194046774394	0.20551255781574032	5				NaN	NaN	0	NaN	37	2227	2265
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2270	11.852	NaN	1589.6	30	0	428.25	0.144			+	38908	SSPPPTLSRQ	10	31	357.1927175245794	NaN	0	357.192626953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSPPPTLSRQ_	REV__ENSG00000100207|ENST00000677622|TCF20;REV__nc|ENSG00000100207|Q9UGU0-2|TCF20;REV__TCF20|p.Y1725Ifs*157|1|0.43|ENSG00000100207|chr22:42210133-42210133|A/-|frameshift_variant	35.15202426646627	0.38475398474706135	5				NaN	NaN	0	NaN	38	2230	2269
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2278	11.884	NaN	1472.2	30	0	229.25	0.142	+			3473	ASSATQVHK	9	51	464.7472720983552	927.4799912635104	2	464.7456970214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASSATQVHK_	ENST00000361272.8_2_8:17102747-17104366:-|nuORF	68.84614121027924	0.14577793175421136	5				NaN	NaN	0	NaN	40	2236	2277
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2288	11.932	NaN	1320.1	30	0	401.82	0.142	+			3513	ASSKDAIKK	9	44	474.2803489205102	946.5461449078205	2	474.2800598144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASSKDAIKK_	DSTN|p.Y117H|1|0.26|ENSG00000125868|chr20:17604592-17604592|T/C|missense_variant;ENSG00000125868|ENST00000246069|DSTN;ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000400899.2_1_1:11051144-11051557:-|nuORF;ENST00000530945.1_1_11:65623104-65623215:-|nuORF;nc|ENSG00000125868|P60981-2|DSTN;nc|ENSG00000165410|Q9Y281-3|CFL2	65.15724298150197	0.17062369902793603	5				NaN	NaN	0	NaN	41	2245	2287
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2306	12.011	NaN	2868	30	0	528.29	0.143	+			16264	HEFVDILGL	9	35	521.781746241666	1041.548939550132	2	522.281005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HEFVDILGL_	chr12:15595640-15596090|345|13.48|0.69|4.28|+|ENST00000674286|PTPRO,PTPRO;ENSG00000151490|ENST00000281171|PTPRO;nc|ENSG00000151490|Q16827-2|PTPRO;nc|ENSG00000151490|Q16827-3|PTPRO;nc|ENSG00000151490|Q16827-4|PTPRO	24.519189625965996	0.574102787014149	5				NaN	NaN	0	NaN	44	2260	2305
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2318	12.06	NaN	3420.6	30	0	1011.5	0.142	+			3084	ASGEGHHLK	9	57	468.23857271594244	NaN	0	468.2383117675781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASGEGHHLK_	ENSG00000131771|ENST00000254079|PPP1R1B;ENST00000580772.1_1_17:37785452-37786437:+|nuORF;nc|ENSG00000131771|Q9UD71-2|PPP1R1B;PPP1R1B|p.N97Rfs*45|1|0.46|ENSG00000131771|chr17:39633928-39633931|TGAA/-|frameshift_variant	87.69643885390035	0.04624013146650493	5				NaN	NaN	0	NaN	47	2269	2317
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2328	12.107	NaN	1358.6	30	0	418.81	0.142	+			31279	QIAKDVKQ	8	34	465.2752017540795	928.535850574959	2	465.2738037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QIAKDVKQ_	ENSG00000110651|ENST00000263645|CD81;ENST00000468153.1_1_11:2416081-2418093:+|nuORF;ENST00000531840.1_1_11:2416360-2416819:+|nuORF	66.42927471994793	0.4381325844043345	5				NaN	NaN	0	NaN	48	2278	2327
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2333	12.124	NaN	7388.9	30	0	1794.6	0.142				-1	 	0	74	474.2992717576812	946.5839905821624	2	474.2981872558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	50	2281	2332
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2345	12.174	NaN	6437.3	30	0	2043.9	0.214	+			1565	AGGLPMWER	9	62	508.75178123811384	1015.4890095430277	2	508.7513427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AGGLPMWER_	VIPR2|p.K48Nfs*42|1|0.39|ENSG00000106018|chr7:159142453-159142453|T/-|frameshift_variant	58.78195531508484	0.22376836668196862	5				NaN	NaN	0	NaN	53	2290	2344
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2346	12.177	NaN	537.36	30	0	91.41	0.036	+			44491	TSSELAKKSK	10	30	539.8102416992188	NaN	0	539.8102416992188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TSSELAKKSK_	ENSG00000181555|ENST00000409792|SETD2	25.125986553469783	0.41767453237088564	5				NaN	NaN	0	NaN	54	2290	2344
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2352	12.192	NaN	6401.2	30	0	1247	0.145	+			5393	ATYETKESKK	10	70	592.8128103736415	1183.6110678140828	2	592.8118286132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATYETKESKK_	ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65623404-65625570:-|nuORF;nc|ENSG00000165410|Q9Y281-3|CFL2	133.9117890846969	0.012377333629693975	5				NaN	NaN	0	NaN	57	2293	2351
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2358	12.211	NaN	1285.7	30	0	209.19	0.143			+	32226	QTDPAKKKK	9	34	522.3148726570744	1042.6151923809487	2	522.3145751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QTDPAKKKK_	REV__ENSG00000147679|ENST00000309822|UTP23	40.05817265558897	0.419577045485086	5				NaN	NaN	0	NaN	60	2296	2357
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2370	12.259	NaN	9007.5	30	0	5362.1	0.214	+			5641	AVDAPRRHK	9	29	350.5371273048895	NaN	0	350.8710021972656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVDAPRRHK_	ENSG00000119912|ENST00000265986|IDE;ENST00000496903.5_1_10:94214203-94257457:-|nuORF;nc|ENSG00000119912|P14735-2|IDE	39.252832667884924	0.27938773122138094	5				NaN	NaN	0	NaN	63	2305	2369
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2371	12.263	NaN	3633.6	30	0	1233.2	0.035	+			5640	AVDAPRRHK	9	45	525.3036410717605	1048.5927292103208	2	525.3035888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVDAPRRHK_	ENSG00000119912|ENST00000265986|IDE;ENST00000496903.5_1_10:94214203-94257457:-|nuORF;nc|ENSG00000119912|P14735-2|IDE	32.75053402867276	0.49717649897795874	5				NaN	NaN	0	NaN	64	2305	2369
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2387	12.339	NaN	977.57	30	0	213.81	0.143	+			3420	ASQKNFKAK	9	40	511.2934323826139	NaN	0	511.2935485839844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASQKNFKAK_	ENSG00000176731|ENST00000619594|RBIS;ENST00000523245.1_1_8:86129602-86132627:-|nuORF;nc|ENSG00000176731|Q8N0T1-2|RBIS	45.97224482568171	0.23445038899310136	5				NaN	NaN	0	NaN	65	2320	2386
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2397	12.387	NaN	2147.6	30	0	441.66	0.144	+			22683	KVADHSGQVK	10	50	534.7950640276648	1067.5755751221295	2	534.7942504882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVADHSGQVK_	ENSG00000188243|ENST00000682242|COMMD6;ENST00000477377.1_1_13:76104099-76111947:-|nuORF;nc|ENSG00000188243|Q7Z4G1-2|COMMD6	84.81729255234993	0.1607459278640679	5				NaN	NaN	0	NaN	66	2329	2396
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2405	12.419	NaN	2733.8	30	0	1484.4	0.145	+			30306	PTMNGVSQVSK	11	24	574.2918301875741	1146.569107441948	2	574.2914428710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PTMNGVSQVSK_	ENST00000483298.1_1_10:64953077-64954292:-|nuORF	24.27592903087556	0.735156499691062	5				NaN	NaN	0	NaN	68	2335	2404
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2412	12.451	NaN	6443.5	30	0	1910	0.214			+	31999	QRHPPQKK	8	64	509.7992868388931	1017.5840207445863	2	509.7988586425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QRHPPQKK_	REV__ENSG00000167333|ENST00000300747|TRIM68;REV__ENST00000531101.5_1_11:4621508-4624512:-|nuORF;REV__ENST00000532108.1_1_11:4623360-4626734:-|nuORF;REV__TRIM68|p.H390Tfs*6|1|0.36|ENSG00000167333|chr11:4600566-4600566|G/-|frameshift_variant	88.64286706044652	0.2815785716369046	5				NaN	NaN	0	NaN	69	2341	2411
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2413	12.455	NaN	2034.7	30	0	320.72	0.034	+			39016	SSSGSTAIKK	10	53	483.2678961460332	964.5212393588664	2	483.2668762207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSSGSTAIKK_	ENSG00000131171|ENST00000373212|SH3BGRL;SH3BGRL|p.K19T|1|0.55|ENSG00000131171|chrX:81276994-81276994|A/C|missense_variant	70.8162118820467	0.27065172005956	5				NaN	NaN	0	NaN	70	2341	2411
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2420	12.471	NaN	1187.9	30	0	142.24	0.144			+	1525	AGAPLWDWSN	10	18	558.7596277954663	1115.5047026577324	2	558.759521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AGAPLWDWSN_	REV__nc|ENSG00000138835|P49796-7|RGS3;REV__nc|ENSG00000138835|P49796-8|RGS3	9.705651100619752	0.7671300402814404	5				NaN	NaN	0	NaN	74	2344	2419
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2428	12.504	NaN	4679.4	30	0	1712.7	0.214	+			14350	GTAAKSITKK	10	62	502.80975073844075	1003.6049485436815	2	502.8085021972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTAAKSITKK_	ENSG00000133574|ENST00000255945|GIMAP4	120.63048641472336	0.026439265609364573	5				NaN	NaN	0	NaN	76	2350	2427
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2429	12.508	NaN	1273.8	30	0	206.43	0.106	+			15349	GTVNRATEK	9	40	488.2659427119968	974.5173324907936	2	488.2646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTVNRATEK_	ENSG00000164611|ENST00000352433|PTTG1;ENSG00000250254|ENST00000504686|PTTG2;ENST00000519287.1_1_5:159849240-159855685:+|nuORF;ENST00000523659.5_1_5:159849319-159851384:+|nuORF;ENST00000524244.5_1_5:159849319-159849927:+|nuORF;nc|ENSG00000213005|Q9NZH4|PTTG3P;nc|ENSG00000250254|Q9NZH5|PTTG2;PTTG2|p.K84Nfs*10|1|0.19|ENSG00000250254|chr4:37960682-37960682|A/-|frameshift_variant	79.71258880314673	0.09879134589249085	5				NaN	NaN	0	NaN	77	2350	2427
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2430	12.51	NaN	350.45	30	0	106.06	0.035	+			32715	RALATCHALS	10	11	521.7771606445312	NaN	0	521.7771606445312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RALATCHALS_	ENSG00000159363|ENST00000326735|ATP13A2;nc|ENSG00000159363|Q9NQ11-2|ATP13A2;nc|ENSG00000159363|Q9NQ11-3|ATP13A2	10.865556482863946	0.4201028297492154	5				NaN	NaN	0	NaN	78	2350	2427
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2453	12.604	NaN	1769	30	0	345.72	0.145	+			33759	RPSTTLPIDK	10	30	564.3246458184	1126.6347387035999	2	564.32421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RPSTTLPIDK_	ENSG00000172208|ENST00000624868|OR4X2	12.811709888998246	0.7513471912541434	5				NaN	NaN	0	NaN	83	2368	2452
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2457	12.62	NaN	1757.1	30	0	354.09	0.142			+	33351	RHHLPGRA	8	48	472.270752309739	942.526951686278	2	472.269775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RHHLPGRA_	REV__LRP5|p.D1065Gfs*73|1|0.31|ENSG00000162337|chr11:68423650-68423651|-/G|frameshift_variant	33.51558372728122	0.7005509609380386	5				NaN	NaN	0	NaN	84	2371	2456
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2463	12.639	NaN	7569	30	0	3694.5	0.142	+			21572	KPFKIIVT	8	57	473.3094686721912	944.6043844111824	2	473.3081359863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KPFKIIVT_	ENSG00000174600|ENST00000550402|CMKLR1;nc|ENSG00000174600|Q99788-2|CMKLR1	40.5726180659479	0.6527593143185008	5				NaN	NaN	0	NaN	87	2374	2462
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2469	12.656	NaN	2792.9	30	0	1027.2	0.214			+	50353	WVLATIKK	8	47	479.8075397538246	957.6005265744492	2	479.80615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WVLATIKK_	REV__ENST00000248071.5_1_19:16438326-16438434:+|nuORF	45.9519527083369	0.6193794311207887	5				NaN	NaN	0	NaN	90	2377	2468
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2470	12.659	NaN	1301.2	30	0	299.3	0.034	+			2756	ARGRPERK	8	14	485.2877502441406	NaN	0	485.2877502441406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ARGRPERK_	ENST00000526183.5_1_8:145724106-145726142:+|nuORF	7.193352174278301	1.7418937515398478	5				NaN	NaN	0	NaN	91	2377	2468
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2483	12.721	NaN	2739.8	30	0	1381.9	0.145			+	32760	RAQNYRQAPQ	10	33	616.3206282747046	1230.6267036162092	2	616.3193969726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RAQNYRQAPQ_	REV__ENSG00000237988|ENST00000641137|OR2I1P;REV__nc|ENSG00000237988|Q8NGU4|OR2I1P	26.063383197487333	0.6669871633831898	5				NaN	NaN	0	NaN	92	2389	2482
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2493	12.756	NaN	19593	30	0	4888.7	0.214	+			20537	KFKQELNHQ	9	81	586.3137369968593	1170.6129210605186	2	586.3128662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KFKQELNHQ_	ENSG00000163840|ENST00000296161|DTX3L	75.04331003522576	0.118981335847003	5				NaN	NaN	0	NaN	96	2395	2492
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2494	12.759	NaN	1414.3	30	0	222.8	0.106	+			7849	DQSKPPRK	8	43	478.2710156283066	954.5274783234132	2	478.2701721191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DQSKPPRK_	ENSG00000198722|ENST00000635942|UNC13B	45.9519527083369	0.6193794311207887	5				NaN	NaN	0	NaN	97	2395	2492
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2495	12.761	NaN	4170.1	30	0	1140.7	0.038				-1	LMCTLRPMR	9	39	597.3018777679515	1192.589202602703	2	597.3014526367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_LMC(Carbamidomethyl (C))TLRPM(Oxidation (M))R_	ENST00000505068.5_1_4:71690058-71691144:-|nuORF	27.882242232435846	0.5426732730940306	5				NaN	NaN	0	NaN	98	2395	2492
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2500	12.777	NaN	3748.9	30	0	647.2	0.214	+			6267	AVSKVSTNK	9	50	467.27272767289134	932.5309024125827	2	467.2713317871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVSKVSTNK_	ENSG00000173744|ENST00000310078|AGFG1;nc|ENSG00000173744|P52594-2|AGFG1;nc|ENSG00000173744|P52594-3|AGFG1;nc|ENSG00000173744|P52594-4|AGFG1	83.6470233535746	0.08277643980271215	5				NaN	NaN	0	NaN	100	2398	2499
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2501	12.78	NaN	1736.8	30	0	500.67	0.106			+	-1	CKMPCRTSRA	10	32	605.2862548828125	NaN	0	605.2862548828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_C(Carbamidomethyl (C))KMPCRTSRA_	REV__ENSG00000171847|ENST00000538603|FAM90A1;REV__ENSG00000229924|ENST00000512047|FAM90A26;REV__nc|ENSG00000215354|P0C7X0|FAM90A24;REV__nc|ENSG00000215373|A8MXJ8|FAM90A5;REV__nc|ENSG00000223885|P0C7W8|FAM90A13;REV__nc|ENSG00000230045|P0C7V4|FAM90A15;REV__nc|ENSG00000233115|A0A8V8TNH8|FAM90A11;REV__nc|ENSG00000233132|A0A8V8TPE2|FAM90A3;REV__nc|ENSG00000233295|A6NIJ5|FAM90A20;REV__nc|ENSG00000254229|A8MX19|FAM90A12;REV__nc|ENSG00000285657|P0DV76|FAM90A19;REV__nc|ENSG00000285687|A8MWA6|FAM90A22;REV__nc|ENSG00000285720|P0DV74|FAM90A17;REV__nc|ENSG00000285765|A8MXZ1|FAM90A23;REV__nc|ENSG00000285814|P0C7W9|FAM90A14;REV__nc|ENSG00000285937|A6NJQ4|FAM90A8;REV__nc|ENSG00000285975|A6NKC0|FAM90A7;REV__nc|ENSG00000285975|A6NNJ1|FAM90A9	25.57405402267927	0.4162033004763879	5				NaN	NaN	0	NaN	101	2398	2499
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2502	12.782	NaN	3942.7	30	0	500.16	0.106			+	39039	SSSPFVLIQ	9	54	489.2682061048539	976.5218592765078	2	489.2651672363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSSPFVLIQ_	REV__ENSG00000236104|ENST00000431845|ZBTB22	63.53385203322761	0.18415635464017938	5				NaN	NaN	0	NaN	102	2398	2499
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2503	12.784	NaN	526.98	30	0	110.45	0.035	+			16201	HEAVQRPR	8	23	496.7728576660156	NaN	0	496.7728576660156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HEAVQRPR_	ENST00000413368.5_1_7:1126733-1126811:+|nuORF	17.364965105453717	1.7418937515398478	5				NaN	NaN	0	NaN	103	2398	2499
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2507	12.798	NaN	1413.9	30	0	190.73	0.143	+			32745	RAPRHGPAR	9	49	509.295399642398	1016.5762463515961	2	509.294189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RAPRHGPAR_	ENSG00000157782|ENST00000316803|CABP1	45.9519527083369	0.35044536499095585	5				NaN	NaN	0	NaN	104	2401	2506
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2511	12.815	NaN	806.55	30	0	402.89	0.214	+			32503	QVQAVLQRK	9	22	535.32763671875	NaN	0	535.32763671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QVQAVLQRK_	ENSG00000090615|ENST00000450791|GOLGA3;nc|ENSG00000090615|Q08378-2|GOLGA3	30.317721548370564	0.32449924987115025	5				NaN	NaN	0	NaN	105	2404	2510
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2512	12.818	NaN	606.28	30	0	92.818	0.035	+			31342	QISRGSSHQ	9	25	500.2526550292969	NaN	0	500.2526550292969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QISRGSSHQ_	ENSG00000100003|ENST00000615189|SEC14L2;nc|ENSG00000100003|O76054-4|SEC14L2;nc|ENSG00000100003|O76054-5|SEC14L2;SEC14L2|p.E293G|1|0.38|ENSG00000100003|chr22:30416054-30416054|A/G|missense_variant	26.69291269510374	0.34280015626154364	5				NaN	NaN	0	NaN	106	2404	2510
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2523	12.85	NaN	2233.9	30	0	419.78	0.144	+			21161	KKVKCRKAD	9	49	538.324595689421	NaN	0	538.3246459960938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KKVKCRKAD_	ENSG00000221946|ENST00000270310|FXYD7	71.29570347882199	0.10120983364817086	5				NaN	NaN	0	NaN	111	2410	2522
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2530	12.869	NaN	10603	30	0	1546.9	0.142				-1	 	0	75	438.74990979266795	875.4852666521359	2	438.7486572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	115	2413	2529
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2535	12.885	NaN	5341.9	30	0	960.89	0.214				-1	 	0	59	508.2628895320997	1014.5112261309994	2	508.2620544433594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	117	2416	2534
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2536	12.889	NaN	945.5	30	0	137.62	0.034	+			38990	SSSEPVHAK	9	38	471.23878091655735	940.4630088999147	2	471.2381286621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSSEPVHAK_	ENSG00000173145|ENST00000371361|NOC3L;NOC3L|p.K235Nfs*2|1|0.43|ENSG00000173145|chr10:94353049-94353049|T/-|frameshift_variant;NOC3L|p.L425Yfs*3|1|0.14|ENSG00000173145|chr10:94346540-94346540|A/-|frameshift_variant;NOC3L|p.T423Hfs*5|1|0.09|ENSG00000173145|chr10:94346547-94346547|T/-|frameshift_variant	54.776311868738084	0.25715957988447635	5				NaN	NaN	0	NaN	118	2416	2534
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2541	12.903	NaN	17059	30	0	7737.5	0.214				-1	 	0	52	339.17755645887917	1014.5108399768376	3	339.1767883300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	120	2419	2540
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2542	12.907	NaN	15298	30	0	9694.3	0.106				-1	 	0	43	323.8751086355054	968.6034965067163	3	323.87457275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	121	2419	2540
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2543	12.909	NaN	827.69	30	0	97.228	0.034			+	-1	LQDLLMGV	8	31	452.7454528808594	NaN	0	452.7454528808594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_LQDLLM(Oxidation (M))GV_	REV__ENSG00000167447|ENST00000300917|SMG8;REV__nc|ENSG00000167447|Q8ND04-2|SMG8;REV__nc|ENSG00000167447|Q8ND04-3|SMG8	42.47446043378293	1.7418937515398478	5				NaN	NaN	0	NaN	122	2419	2540
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2550	12.925	NaN	1023.5	30	0	132.47	0.214	+			3990	ATAVAHCKR	9	45	478.7580261230469	NaN	0	478.7580261230469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATAVAHCKR_	chr19:39435705-39435848|468|276.17|0.0|24.72|-|0|RPS16,RPS16|1;ENSG00000105193|ENST00000251453|RPS16;ENST00000601390.1_1_19:39926180-39926535:-|nuORF	54.776311868738084	0.17377682019723872	5				NaN	NaN	0	NaN	126	2422	2549
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2551	12.929	NaN	3840.8	30	0	1161.7	0.106				-1	LLPQGCECC	9	26	540.220639737345	1078.4267265414899	2	540.2192993164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_LLPQGCEC(Carbamidomethyl (C))C(Carbamidomethyl (C))_	ENSG00000163395|ENST00000335211|IGFN1;nc|ENSG00000163395|Q86VF2-2|IGFN1;nc|ENSG00000163395|Q86VF2|IGFN1	15.641811463095205	0.6112419832031292	5				NaN	NaN	0	NaN	127	2422	2549
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2552	12.931	NaN	1603.3	30	0	295.37	0.106	+			38445	SSALTNHK	8	43	429.2269287109375	NaN	0	429.2269287109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSALTNHK_	ENSG00000185177|ENST00000319636|ZNF479;ENSG00000197013|ENST00000358491|ZNF429;ZNF429|p.H387Qfs*13|1|0.26|ENSG00000197013|chr19:21537213-21537214|AT/-|frameshift_variant;ZNF479|p.K332Afs*2|1|0.05|ENSG00000185177|chr7:57120421-57120422|-/AGGC|frameshift_variant;ZNF479|p.R289I|1|0.68|ENSG00000185177|chr7:57120549-57120549|C/A|missense_variant	106.41520541750704	1.7418937515398478	5				NaN	NaN	0	NaN	128	2422	2549
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2553	12.933	NaN	2055.6	30	0	368.12	0.106	+			50291	WSGQYVGGAE	10	38	527.2356017516977	NaN	0	527.2359008789062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_WSGQYVGGAE_	CON__Streptavidin	19.1035232394073	0.4201028297492154	5				NaN	NaN	0	NaN	129	2422	2549
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2554	12.934	NaN	2077.5	30	0	493.83	0.106				-1	KCDSCRRL	8	39	519.251708984375	NaN	0	519.251708984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_KC(Carbamidomethyl (C))DSCRRL_	nc|ENSG00000173421|Q8IYA8-3|IHO1	30.503639358989545	1.7418937515398478	5				NaN	NaN	0	NaN	130	2422	2549
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2555	12.936	NaN	1226.7	30	0	333.43	0.106	+			29809	PKGAAILK	8	36	399.26558044750624	NaN	0	399.26556396484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PKGAAILK_	nc|ENSG00000134333|P00338-2|LDHA	57.81127852772723	1.7418937515398478	5				NaN	NaN	0	NaN	131	2422	2549
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2556	12.938	NaN	365.08	30	0	50.182	0.035			+	32206	QTAALRARV	9	28	493.29879544307107	NaN	0	493.29840087890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QTAALRARV_	REV__ENSG00000138050|ENST00000505747|THUMPD2;REV__ENST00000531687.1_1_2:39997229-40006379:-|nuORF;REV__nc|ENSG00000138050|Q9BTF0-2|THUMPD2	27.047317107675042	0.34101084205454363	5				NaN	NaN	0	NaN	132	2422	2549
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2561	12.953	NaN	5874	30	0	1347.8	0.214	+			5608	AVCGKVKCK	9	62	525.2842662755896	1048.5539796179792	2	525.2838134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_AVC(Carbamidomethyl (C))GKVKC(Carbamidomethyl (C))K_	ENSG00000135317|ENST00000314673|SNX14;ENST00000508980.5_1_6:86270935-86284080:-|nuORF;nc|ENSG00000135317|Q9Y5W7-2|SNX14;nc|ENSG00000135317|Q9Y5W7-3|SNX14;nc|ENSG00000135317|Q9Y5W7-4|SNX14;SNX14|p.F173Lfs*5|3|0.42|ENSG00000135317|chr6:85565362-85565362|A/-|frameshift_variant	99.37495909608758	0.03983967222258828	5				NaN	NaN	0	NaN	134	2425	2560
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2562	12.957	NaN	1854.5	30	0	227.54	0.106	+			47682	VSDTNQHVK	9	54	514.2632861080309	1026.5120192828617	2	514.2615966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSDTNQHVK_	ENSG00000137713|ENST00000527614|PPP2R1B;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;nc|ENSG00000137713|P30154-2|PPP2R1B;nc|ENSG00000137713|P30154-3|PPP2R1B;nc|ENSG00000137713|P30154-5|PPP2R1B	63.53385203322761	0.18415635464017938	5				NaN	NaN	0	NaN	135	2425	2560
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2563	12.959	NaN	769.59	30	0	404.05	0.106	+			29813	PKIQKDLK	8	14	485.3082275390625	NaN	0	485.3082275390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PKIQKDLK_	ENSG00000127952|ENST00000359697|STYXL1;nc|ENSG00000127952|Q9Y6J8-2|STYXL1;nc|ENSG00000127952|Q9Y6J8-3|STYXL1;nc|ENSG00000127952|Q9Y6J8-4|STYXL1	8.231297230196988	1.7418937515398478	5				NaN	NaN	0	NaN	136	2425	2560
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2564	12.961	NaN	876.84	30	0	251.11	0.036			+	-1	FATNSMRPK	9	26	534.2693481445312	NaN	0	534.2693481445312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_FATNSM(Oxidation (M))RPK_	REV__ENSG00000167306|ENST00000285039|MYO5B	17.364965105453717	0.37820932774828947	5				NaN	NaN	0	NaN	137	2425	2560
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2569	12.975	NaN	1768.3	30	0	960.93	0.144			+	-1	AVSSIEALLM	10	28	350.5243835449219	NaN	0	350.5243835449219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_AVSSIEALLM(Oxidation (M))_	REV__ENSG00000174606|ENST00000366962|ANGEL2;REV__nc|ENSG00000174606|Q5VTE6-2|ANGEL2	29.170058357718403	0.40439580130713204	5				NaN	NaN	0	NaN	139	2428	2568
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2576	12.995	NaN	7026.7	30	0	1651.8	0.144				-1	 	0	59	343.54579714995435	1027.615562050063	3	343.5450744628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	143	2431	2575
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2581	13.012	NaN	4200.7	30	0	538.67	0.214	+			1004	AEKKTKQTL	9	54	523.815060854102	1045.6155687750038	2	523.8146362304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEKKTKQTL_	ENSG00000165525|ENST00000298310|NEMF;ENST00000556925.5_1_14:50285084-50295410:-|nuORF;ENST00000557380.5_1_14:50292586-50301128:-|nuORF;nc|ENSG00000165525|O60524-3|NEMF;nc|ENSG00000165525|O60524-4|NEMF;nc|ENSG00000165525|O60524-5|NEMF;NEMF|p.K641Rfs*9|1|0.15|ENSG00000165525|chr14:49802721-49802721|T/-|frameshift_variant;NEMF|p.M879*|1|0.12|ENSG00000165525|chr14:49789558-49789558|T/-|frameshift_variant;NEMF|p.M879Nfs*10|1|0.13|ENSG00000165525|chr14:49789557-49789558|-/T|frameshift_variant	120.30596017624542	0.02101454110788768	5				NaN	NaN	0	NaN	145	2434	2580
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2582	13.015	NaN	3569.6	30	0	548.98	0.106	+			20114	KEKKRTVE	8	63	509.3073603082289	1016.6001676832578	2	509.3070068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEKKRTVE_	ENSG00000196313|ENST00000434423|POM121;nc|ENSG00000196313|Q96HA1-2|POM121;nc|ENSG00000196313|Q96HA1-3|POM121	67.49366992349736	0.4277823096851425	5				NaN	NaN	0	NaN	146	2434	2580
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2583	13.017	NaN	867.43	30	0	157.83	0.035	+			47661	VSDANQHVK	9	33	499.2574769024463	996.5004008716926	2	499.2568054199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSDANQHVK_	ENSG00000105568|ENST00000322088|PPP2R1A	51.19269402634007	0.2889735674168909	5				NaN	NaN	0	NaN	147	2434	2580
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2591	13.049	NaN	6151.6	30	0	1305.9	0.214			+	44041	TPPMQVLDEP	10	50	563.7745031321273	NaN	0	563.7747192382812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TPPMQVLDEP_	REV__ENSG00000157613|ENST00000621158|CREB3L1	31.529811441608018	0.39664753963064203	5				NaN	NaN	0	NaN	149	2440	2590
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2592	13.052	NaN	1655.9	30	0	264.59	0.106			+	7517	DGPTRLQM	8	47	459.2298049448157	916.4450569564315	2	459.2281188964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DGPTRLQM_	REV__ENSG00000054793|ENST00000338821|ATP9A;REV__nc|ENSG00000054793|O75110-2|ATP9A	50.0245360154114	0.5941082100236891	5				NaN	NaN	0	NaN	150	2440	2590
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2593	13.054	NaN	3758.1	30	0	1581.7	0.106				-1	MFFLMYLI	8	25	547.2772179252348	1092.5398829172696	2	547.2769165039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_MFFLM(Oxidation (M))YLI_	ENSG00000196218|ENST00000359596|RYR1;nc|ENSG00000196218|P21817-2|RYR1;nc|ENSG00000196218|P21817-3|RYR1	16.704963439144045	0.7946246187734944	5				NaN	NaN	0	NaN	151	2440	2590
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2594	13.056	NaN	1110.3	30	0	442.35	0.036			+	-1	MPPGTPLPQQ	10	20	541.2698974609375	NaN	0	541.2698974609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_M(Oxidation (M))PPGTPLPQQ_	REV__ENSG00000134780|ENST00000257215|DAGLA	19.996771675451527	0.4201028297492154	5				NaN	NaN	0	NaN	152	2440	2590
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2602	13.076	NaN	1484.3	30	0	241.15	0.214	+			32404	QVEEYKLR	8	36	532.7926025390625	NaN	0	532.7926025390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QVEEYKLR_	ENST00000471887.1_1_7:18557286-18557502:+|nuORF	45.9519527083369	1.7418937515398478	5				NaN	NaN	0	NaN	157	2443	2601
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2603	13.08	NaN	2246.3	30	0	440.34	0.106				-1	AKRTCPSLS	9	46	510.2674118982672	NaN	0	510.2672119140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_AKRTC(Carbamidomethyl (C))PSLS_	ENSG00000033800|ENST00000249636|PIAS1;ENST00000567417.1_1_15:68468885-68473789:+|nuORF;nc|ENSG00000033800|O75925-2|PIAS1	42.396135135203025	0.2590952873412954	5				NaN	NaN	0	NaN	158	2443	2601
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2604	13.082	NaN	1186.2	30	0	216.95	0.106			+	13659	GNGVEILHVL	10	29	525.8029861374962	1049.5914193417923	2	525.80419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GNGVEILHVL_	REV__ENSG00000197136|ENST00000355703|PCNX3;REV__ENST00000439247.2_1_11:65394334-65404446:+|nuORF;REV__nc|ENSG00000197136|Q9H6A9-3|PCNX3	18.324413293986947	0.7233354337501514	5				NaN	NaN	0	NaN	159	2443	2601
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2605	13.084	NaN	1779.3	30	0	161.53	0.106				-1	TAQCALRVT	9	36	340.5135803222656	NaN	0	340.5135803222656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_TAQC(Carbamidomethyl (C))ALRVT_	CELSR2|p.P2879Lfs*14|1|0.28|ENSG00000143126|chr1:109273557-109273557|C/-|frameshift_variant;CELSR2|p.V2215Wfs*26|2|0.42|ENSG00000143126|chr1:109269115-109269115|C/-|frameshift_variant;ENSG00000143126|ENST00000271332|CELSR2	37.81151784470057	0.28666463014928195	5				NaN	NaN	0	NaN	160	2443	2601
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2606	13.086	NaN	541.09	30	0	119.48	0.035	+			37192	SKATKLHSQ	9	29	500.2822265625	NaN	0	500.2822265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SKATKLHSQ_	ENSG00000132613|ENST00000338779|MTSS2;nc|ENSG00000132613|Q765P7-2|MTSS2	33.921630207806714	0.3063038642147651	5				NaN	NaN	0	NaN	161	2443	2601
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2618	13.121	NaN	3517.3	30	0	390.12	0.145				-1	GVMKEMSNSK	10	65	571.7644637957119	1141.5143746582237	2	571.7635498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_GVM(Oxidation (M))KEM(Oxidation (M))SNSK_	ENSG00000170214|ENST00000306675|ADRA1B	66.42927471994793	0.3073667423445326	5				NaN	NaN	0	NaN	167	2449	2617
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2622	13.137	NaN	1525.9	30	0	166.82	0.214	+			40276	STSQQHLTK	9	46	515.2717600247507	1028.5289671163014	2	515.2708740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STSQQHLTK_	ENSG00000111266|ENST00000298573|DUSP16	76.16968421966216	0.11411088698345859	5				NaN	NaN	0	NaN	168	2452	2621
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2623	13.14	NaN	1148.4	30	0	199.3	0.038				-1	LHRCCNNQL	9	43	600.2756255132196	1198.536698093239	2	600.2738037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))LHRC(Carbamidomethyl (C))CNNQL_	ENST00000357635.9_1_15:75192579-75192729:-|nuORF	31.954861631926434	0.5046124803899898	5				NaN	NaN	0	NaN	169	2452	2621
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2633	13.186	NaN	6341.4	30	0	1004.5	0.214				-1	 	0	60	475.762454915904	949.510356898608	2	475.7616271972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	170	2461	2632
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2634	13.19	NaN	1905.3	30	0	449.44	0.038	+			10526	EWELLEPAQK	10	45	621.8218187034631	1241.6290844737262	2	621.8212280273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EWELLEPAQK_	ENSG00000172006|ENST00000317243|ZNF554;ZNF554|p.K406Sfs*18|1|0.22|ENSG00000172006|chr19:2834449-2834449|A/-|frameshift_variant	66.96192283764107	0.30252237217063654	5				NaN	NaN	0	NaN	171	2461	2632
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2639	13.204	NaN	4844.4	30	0	1344.8	0.147			+	25862	LSFHESLLEPA	11	41	414.8834482398346	1241.6285153197039	3	414.8824157714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSFHESLLEPA_	REV__ENST00000390341.2_1_7:38339806-38339917:-|nuORF	35.17822180527639	0.6208003396870814	5				NaN	NaN	0	NaN	173	2464	2638
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2644	13.221	NaN	2173.3	30	0	266.52	0.142	+			100	AADKRSKAL	9	43	480.2863850013965	958.5582170695931	2	480.2848815917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AADKRSKAL_	ENSG00000156411|ENST00000286953|ATP5MJ;nc|ENSG00000156411|P56378-2|ATP5MJ	44.116797842482775	0.37197099687881774	5				NaN	NaN	0	NaN	175	2467	2643
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2649	13.238	NaN	1495.1	30	0	176.54	0.214			+	20610	KGDELVCLK	9	46	502.77374261311957	1003.5329322930392	2	502.772216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KGDELVCLK_	REV__KIF2C|p.R420C|1|0.36|ENSG00000142945|chr1:44759239-44759239|C/T|missense_variant	98.62937762414208	0.04060045538121712	5				NaN	NaN	0	NaN	177	2470	2648
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2650	13.242	NaN	518.19	30	0	111.19	0.106	+			26818	LVSSTGAK	8	31	381.72137950578883	NaN	0	381.72125244140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LVSSTGAK_	ENSG00000166828|ENST00000300061|SCNN1G;SCNN1G|p.H439Sfs*28|1|0.07|ENSG00000166828|chr16:23212696-23212697|-/CTCTG|frameshift_variant;SCNN1G|p.K626Qfs*23|1|0.1|ENSG00000166828|chr16:23215388-23215389|-/C|frameshift_variant	30.503639358989545	1.7418937515398478	5				NaN	NaN	0	NaN	178	2470	2648
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2651	13.244	NaN	1013.3	30	0	267.97	0.034			+	50477	YAIIPMHQ	8	20	486.7487144704144	NaN	0	486.7487487792969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YAIIPMHQ_	REV__ENSG00000177054|ENST00000446113|ZDHHC13;REV__ENST00000525490.5_1_11:19138758-19188042:+|nuORF;REV__nc|ENSG00000177054|Q8IUH4-3|ZDHHC13;REV__ZDHHC13|p.W358Lfs*13|1|0.28|ENSG00000177054|chr11:19158998-19158999|-/T|frameshift_variant	9.47055586587303	1.741893751539848	5				NaN	NaN	0	NaN	179	2470	2648
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2669	13.323	NaN	2033	30	0	631.46	0.144	+			14012	GSFGKDQAHK	10	56	537.7723262188925	1073.530099504585	2	537.7711791992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSFGKDQAHK_	ENSG00000134987|ENST00000513710|WDR36;ENST00000505303.5_1_5:110428043-110447004:+|nuORF;nc|ENSG00000134987|Q8NI36|WDR36	58.2462437865262	0.38179041844353556	5				NaN	NaN	0	NaN	182	2485	2668
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2676	13.354	NaN	2540	30	0	485.69	0.214	+			44908	TVAEKAVKK	9	56	487.3075231811472	972.6004934290944	2	487.3066101074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVAEKAVKK_	ENSG00000101596|ENST00000320876|SMCHD1;ENST00000577300.1_1_18:2703698-2706469:+|nuORF;nc|ENSG00000101596|A6NHR9-2|SMCHD1;SMCHD1|p.D1006Kfs*40|1|0.32|ENSG00000101596|chr18:2729370-2729371|-/AA|frameshift_variant;SMCHD1|p.D1006Tfs*39|2|0.32|ENSG00000101596|chr18:2729371-2729371|A/-|frameshift_variant;SMCHD1|p.G727Rfs*21|1|0.3|ENSG00000101596|chr18:2707832-2707833|-/A|frameshift_variant;SMCHD1|p.M779Wfs*12|1|0.38|ENSG00000101596|chr18:2718226-2718226|A/-|frameshift_variant	90.60085204095205	0.06317133949006545	5				NaN	NaN	0	NaN	183	2491	2675
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2677	13.358	NaN	707.39	30	0	90.474	0.035	+			49353	VVSQFKILV	9	37	516.8241577148438	NaN	0	516.8241577148438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVSQFKILV_	ENSG00000166887|ENST00000318006|VPS39;nc|ENSG00000166887|Q96JC1|VPS39	56.72105179125745	0.16330365735109603	5				NaN	NaN	0	NaN	184	2491	2675
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2685	13.388	NaN	2821.5	30	0	1254.2	0.214	+			35386	SAQDRTDLLN	10	29	378.1925077532427	1131.5556938599282	3	378.1914978027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAQDRTDLLN_	ENSG00000165457|ENST00000298223|FOLR2	28.081489160057373	0.6505064946289502	5				NaN	NaN	0	NaN	186	2497	2684
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2686	13.392	NaN	1792.2	30	0	440.81	0.037	+			31451	QKSNMKLHM	9	55	566.7852031689165	1131.555853404633	2	566.7857055664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_QKSNM(Oxidation (M))KLHM_	ENSG00000130856|ENST00000320610|ZNF236;ENST00000543926.6_1_18:74647944-74680292:+|nuORF;nc|ENSG00000130856|Q9UL36|ZNF236	60.97194046774394	0.20551255781574032	5				NaN	NaN	0	NaN	187	2497	2684
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2694	13.422	NaN	2294.4	30	0	548.67	0.214				-1	 	0	50	445.7519135528336	889.4892741724673	2	445.7507019042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	189	2503	2693
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2695	13.426	NaN	3719	30	0	564.89	0.036	+			17977	IHCRPESSK	9	60	528.765653468119	1055.516754003038	2	528.7642211914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IHCRPESSK_	ENSG00000033122|ENST00000651989|LRRC7;LRRC7|p.L935*|1|0.36|ENSG00000033122|chr1:70038736-70038736|C/-|frameshift_variant;LRRC7|p.V1027Sfs*16|1|0.28|ENSG00000033122|chr1:70039010-70039010|A/-|frameshift_variant;LRRC7|p.V1027Sfs*5|2|0.41|ENSG00000033122|chr1:70039009-70039010|-/A|frameshift_variant;nc|ENSG00000033122|Q96NW7-2|LRRC7;nc|ENSG00000033122|Q96NW7|LRRC7	64.20726635412375	0.17854274437659667	5				NaN	NaN	0	NaN	190	2503	2693
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2703	13.444	NaN	2893.5	30	0	925.18	0.144	+			5384	ATYETKESK	9	38	352.84504219431284	NaN	0	352.84478759765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATYETKESK_	ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65623404-65625570:-|nuORF;nc|ENSG00000165410|Q9Y281-3|CFL2	26.69291269510374	0.34280015626154364	5				NaN	NaN	0	NaN	195	2506	2702
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2714	13.479	NaN	1929.3	30	0	612.59	0.214	+			22266	KTATAVAHCK	10	52	515.2801708701752	NaN	0	515.2804565429688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTATAVAHCK_	chr19:39435705-39435848|468|276.17|0.0|24.72|-|0|RPS16,RPS16|1;ENSG00000105193|ENST00000251453|RPS16;ENST00000601390.1_1_19:39926180-39926535:-|nuORF	72.09557110113691	0.1383596426166609	5				NaN	NaN	0	NaN	200	2512	2713
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2715	13.482	NaN	1198.4	30	0	508.04	0.106			+	6897	CLRETRGQK	9	32	545.7941284179688	NaN	0	545.7941284179688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_CLRETRGQK_	REV__ENSG00000185010|ENST00000360256|F8;REV__F8|p.E1988Rfs*4|1|0.36|ENSG00000185010|chrX:154903942-154903943|-/T|frameshift_variant	28.081489160057373	0.33578952234132536	5				NaN	NaN	0	NaN	201	2512	2713
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2716	13.484	NaN	1277.3	30	0	264.92	0.106				-1	 	0	37	377.7330157486926	753.4514785641852	2	377.7322998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	202	2512	2713
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2717	13.486	NaN	3344.5	30	0	683.14	0.106	+			36744	SGYEVHHQK	9	53	542.7638606205794	1083.5131683079587	2	542.7634887695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SGYEVHHQK_	ENSG00000142192|ENST00000346798|APP;nc|ENSG00000142192|P05067-10|APP;nc|ENSG00000142192|P05067-11|APP;nc|ENSG00000142192|P05067-3|APP;nc|ENSG00000142192|P05067-4|APP;nc|ENSG00000142192|P05067-5|APP;nc|ENSG00000142192|P05067-6|APP;nc|ENSG00000142192|P05067-7|APP;nc|ENSG00000142192|P05067-8|APP;nc|ENSG00000142192|P05067-9|APP	82.24051045832904	0.08786059719216216	5				NaN	NaN	0	NaN	203	2512	2713
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2718	13.488	NaN	1888	30	0	338.17	0.034	+			6426	AVVSGVHKK	9	44	462.7859664857787	923.5573800383575	2	462.784912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVVSGVHKK_	ACTR3B-JMJD1C|1|fusion;ENSG00000171988|ENST00000399262|JMJD1C;nc|ENSG00000171988|Q15652-3|JMJD1C	101.60071028292904	0.0375685401170269	5				NaN	NaN	0	NaN	204	2512	2713
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2723	13.502	NaN	2768.6	30	0	553.2	0.215	+			6134	AVQDKGSIHK	10	58	541.8030608456166	1081.5915687580332	2	541.8021850585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVQDKGSIHK_	ENSG00000178035|ENST00000326739|IMPDH2;ENST00000466147.5_1_3:49062090-49062580:-|nuORF;ENST00000484872.1_1_3:49061926-49062670:-|nuORF	101.25262130126117	0.07397688119410509	5				NaN	NaN	0	NaN	206	2515	2722
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2724	13.506	NaN	2561.9	30	0	354.9	0.106			+	40392	STVAGAKK	8	43	381.2304047677907	760.4462566023814	2	381.229248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STVAGAKK_	REV__ENSG00000111110|ENST00000228705|PPM1H;REV__PPM1H|p.T227Hfs*30|2|0.16|ENSG00000111110|chr12:62801894-62801894|G/-|frameshift_variant	76.84663266511073	0.3498490246073164	5				NaN	NaN	0	NaN	207	2515	2722
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2725	13.508	NaN	3900.9	30	0	373.64	0.036	+			20069	KEKEQAKQL	9	62	551.318455666894	1100.622358400588	2	551.8182983398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEKEQAKQL_	ENSG00000110844|ENST00000548825|PRPF40B;ENSG00000196504|ENST00000545856|PRPF40A;nc|ENSG00000110844|Q6NWY9-2|PRPF40B;nc|ENSG00000110844|Q6NWY9-3|PRPF40B;nc|ENSG00000110844|Q6NWY9|PRPF40B;nc|ENSG00000196504|O75400-2|PRPF40A;nc|ENSG00000196504|O75400-3|PRPF40A;nc|ENSG00000196504|O75400|PRPF40A	134.7655990226056	0.012935733000282069	5				NaN	NaN	0	NaN	208	2515	2722
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2731	13.524	NaN	852.54	30	0	301.85	0.142	+			11267	FIRKAFGC	8	20	471.2537536621094	NaN	0	471.2537536621094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FIRKAFGC_	ENST00000371917.4_1_20:47633879-47635458:+|nuORF	9.47055586587303	1.741893751539848	5				NaN	NaN	0	NaN	211	2518	2730
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2739	13.544	NaN	6880.8	30	0	2095.5	0.214	+			14343	GTAAKSITK	9	62	438.7612264417236	NaN	0	438.76092529296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTAAKSITK_	ENSG00000133574|ENST00000255945|GIMAP4	190.2614974402762	0.0011098154530388054	5				NaN	NaN	0	NaN	216	2521	2738
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2740	13.548	NaN	2107.9	30	0	584.71	0.106	+			3758	ATAEKCLHK	9	56	529.276994075795	NaN	0	529.2777709960938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_ATAEKC(Carbamidomethyl (C))LHK_	ENSG00000180098|ENST00000373830|TRNAU1AP;ENST00000464880.5_1_1:28879622-28887433:+|nuORF;ENST00000480930.5_1_1:28879622-28887666:+|nuORF;ENST00000484775.1_1_1:28887181-28904036:+|nuORF;ENST00000491577.5_1_1:28879622-28887259:+|nuORF;ENST00000495995.5_1_1:28880088-28887666:+|nuORF;TRNAU1AP|p.Q222Sfs*29|1|0.24|ENSG00000180098|chr1:28571305-28571305|C/-|frameshift_variant	60.11826168202944	0.14881452885248947	5				NaN	NaN	0	NaN	217	2521	2738
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2741	13.55	NaN	1385.6	30	0	371.91	0.106	+			14457	GTCAEKLKK	9	46	517.7882864221397	1033.5620199110792	2	517.7876586914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_GTC(Carbamidomethyl (C))AEKLKK_	ENSG00000076984|ENST00000397979|MAP2K7;ENST00000468058.1_1_19:7975099-7977313:+|nuORF;MAP2K7|p.P292Qfs*119|2|0.25|ENSG00000076984|chr19:7911264-7911264|C/-|frameshift_variant;nc|ENSG00000076984|O14733-2|MAP2K7;nc|ENSG00000076984|O14733-3|MAP2K7;nc|ENSG00000076984|O14733-4|MAP2K7	49.536043120802724	0.308405419312776	5				NaN	NaN	0	NaN	218	2521	2738
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2742	13.552	NaN	2131.9	30	0	295.39	0.036			+	-1	FRCRSARQ	8	62	540.7788317624909	1079.5431105917817	2	541.2793579101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_FRC(Carbamidomethyl (C))RSARQ_	REV__ENST00000473879.1_1_7:2579518-2580648:-|nuORF	45.97224482568171	0.6192535143389125	5				NaN	NaN	0	NaN	219	2521	2738
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2747	13.566	NaN	2259.6	30	0	350.22	0.214	+			22232	KSYDQVHSGK	10	59	574.7894265104818	NaN	0	574.789794921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSYDQVHSGK_	ACOX1|p.N501Tfs*6|1|0.47|ENSG00000161533|chr17:75949577-75949577|T/-|frameshift_variant;ENSG00000161533|ENST00000293217|ACOX1;nc|ENSG00000161533|Q15067-3|ACOX1;nc|ENSG00000161533|Q15067|ACOX1	88.1336951990783	0.06092585671649051	5				NaN	NaN	0	NaN	221	2524	2746
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2748	13.57	NaN	1060.2	30	0	99.71	0.035			+	28148	NALFLTKAP	9	44	487.7866303872958	973.5587078413917	2	487.7852478027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NALFLTKAP_	REV__ENST00000379951.6_1_4:109089626-109090058:-|nuORF	47.657333605630114	0.33044192980041115	5				NaN	NaN	0	NaN	222	2524	2746
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2755	13.586	NaN	8139	30	0	924.23	0.214				-1	 	0	46	332.5426617391323	994.606155817597	3	332.5421142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	226	2527	2754
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2756	13.59	NaN	1064	30	0	175.85	0.035	+			23745	LCALSWAKK	9	30	510.29095458984375	NaN	0	510.29095458984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LCALSWAKK_	nc|ENSG00000165105|Q8IZ41-2|RASEF	29.14955571784316	0.3303970763161698	5				NaN	NaN	0	NaN	227	2527	2754
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2766	13.622	NaN	1223.4	30	0	190.02	0.145			+	43297	TFQGEQAALKR	11	47	624.8387451171875	NaN	0	624.8387451171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TFQGEQAALKR_	REV__ENSG00000169994|ENST00000409816|MYO7B;REV__ENST00000496841.5_1_2:128377972-128392002:+|nuORF;REV__nc|ENSG00000169994|Q6PIF6-2|MYO7B;REV__nc|ENSG00000169994|Q6PIF6|MYO7B	35.15202426646627	0.40875833226131825	5				NaN	NaN	0	NaN	231	2533	2765
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2775	13.655	NaN	844.92	30	0	118.38	0.214	+			21910	KRSSSIAST	9	31	468.7591552734375	NaN	0	468.7591552734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KRSSSIAST_	ENSG00000135835|ENST00000367588|KIAA1614;nc|ENSG00000135835|Q5VZ46-2|KIAA1614	25.57405402267927	0.3484490411150625	5				NaN	NaN	0	NaN	234	2539	2774
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2776	13.658	NaN	2937.3	30	0	527.89	0.034	+			38145	SQAFFKLK	8	44	484.7815208290535	967.548488724907	2	484.7799377441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SQAFFKLK_	ENST00000451020.6_1_4:419554-419923:-|nuORF	42.396135135203025	0.6414440140393314	5				NaN	NaN	0	NaN	235	2539	2774
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2786	13.689	NaN	2137.9	30	0	660.82	0.214			+	201	AALFPLPKK	9	51	492.8150620087199	983.6155710842398	2	492.8140869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AALFPLPKK_	REV__ENSG00000141052|ENST00000425538|MYOCD;REV__MYOCD|p.Q636Sfs*59|1|0.39|ENSG00000141052|chr17:12753188-12753189|-/C|frameshift_variant;REV__nc|ENSG00000141052|Q8IZQ8-2|MYOCD;REV__nc|ENSG00000141052|Q8IZQ8|MYOCD	45.9519527083369	0.35044536499095585	5				NaN	NaN	0	NaN	239	2545	2785
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2787	13.693	NaN	10997	30	0	2336.2	0.106	+			18787	ITQRGNVAK	9	58	329.530149670383	985.568619611349	3	329.5296630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ITQRGNVAK_	ENSG00000120742|ENST00000239944|SERP1;ENSG00000151778|ENST00000379179|SERP2	44.377184641726394	0.36891676396732553	5				NaN	NaN	0	NaN	240	2545	2785
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2788	13.695	NaN	1820.8	30	0	558.97	0.033				-1	 	0	42	420.22312095819706	838.4316889831941	2	420.2218933105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	241	2545	2785
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2794	13.71	NaN	2073.5	30	0	424.6	0.214	+			21681	KQEHFLKSL	9	49	565.321076277535	1128.6275996218699	2	565.3201293945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KQEHFLKSL_	ENSG00000171763|ENST00000305560|SPATA5L1;ENST00000533841.1_1_15:45709932-45713405:+|nuORF	53.08895987439943	0.27122541748218487	5				NaN	NaN	0	NaN	244	2548	2793
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2795	13.714	NaN	2437.9	30	0	481.57	0.035				-1	 	0	57	492.8150620087199	983.6155710842398	2	492.7781066894531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	245	2548	2793
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2804	13.734	NaN	1456.9	30	0	349.87	0.145				-1	SLRKCSVMF	9	29	362.85302734375	NaN	0	362.85302734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_SLRKCSVM(Oxidation (M))F_	ENSG00000184313|ENST00000421030|MROH7;nc|ENSG00000184313|Q68CQ1-1|MROH7;nc|ENSG00000184313|Q68CQ1-9|MROH7	29.170058357718403	0.3302935627494407	5				NaN	NaN	0	NaN	251	2551	2803
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2808	13.75	NaN	5573.9	30	0	1231	0.143	+			47875	VSLGRVLIQ	9	36	328.87886375163384	983.6147618551015	3	328.87811279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSLGRVLIQ_	ENSG00000167695|ENST00000308278|TLCD3A;ENST00000570699.1_1_17:636236-644807:+|nuORF	21.9598887501803	0.5980208138527809	5				NaN	NaN	0	NaN	252	2554	2807
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2814	13.768	NaN	16316	30	0	1381.6	0.144				-1	 	0	85	339.87397636978284	1016.6000997095485	3	339.8733215332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	255	2557	2813
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2818	13.785	NaN	4384.8	30	0	476.63	0.142	+			44399	TSLLFLTAG	9	56	461.7650358759697	921.5155188187395	2	461.7637939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSLLFLTAG_	ENST00000457668.1_1_2:60578942-60579098:-|nuORF	57.81127852772723	0.2318599694398087	5				NaN	NaN	0	NaN	256	2560	2817
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2827	13.818	NaN	3057.5	30	0	319.88	0.214	+			25832	LSDQTKEKE	9	63	539.2761202009285	1076.537687468657	2	539.2747802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSDQTKEKE_	ENSG00000106028|ENST00000265304|SSBP1	96.0336014099291	0.047854655524928534	5				NaN	NaN	0	NaN	259	2566	2826
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2828	13.822	NaN	2386	30	0	542.78	0.106	+			49295	VVQKKIAEK	9	62	521.8353957782917	NaN	0	521.8352661132812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVQKKIAEK_	ENSG00000171045|ENST00000524325|TSNARE1;ENST00000518928.1_1_8:143381726-143407541:-|nuORF;nc|ENSG00000171045|Q96NA8-2|TSNARE1	98.62937762414208	0.024200618960070384	5				NaN	NaN	0	NaN	260	2566	2826
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2829	13.824	NaN	1839.5	30	0	424.65	0.035	+			2296	AMAPPSHRK	9	52	497.76736291044926	993.5201728876985	2	497.7661437988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AMAPPSHRK_	ENSG00000141456|ENST00000572293|PELP1;ENST00000573523.5_1_17:4574736-4578861:-|nuORF	53.351449002276354	0.2690372970092375	5				NaN	NaN	0	NaN	261	2566	2826
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2833	13.839	NaN	1941.4	30	0	255.51	0.214			+	44347	TSGRGYLK	8	46	441.2473897034204	880.4802264736409	2	441.24578857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSGRGYLK_	REV__ENSG00000133313|ENST00000324262|CNDP2;REV__ENST00000585263.1_1_18:72176049-72176178:+|nuORF	55.50420428727701	0.5462892107279674	5				NaN	NaN	0	NaN	262	2569	2832
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2834	13.842	NaN	1255.2	30	0	342.64	0.037			+	10044	ESCQFRKKQ	9	36	577.292465073511	NaN	0	577.2924194335938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ESCQFRKKQ_	REV__ENSG00000204947|ENST00000378061|ZNF425	40.77816245573522	0.2702456086868081	5				NaN	NaN	0	NaN	263	2569	2832
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2839	13.858	NaN	4679.8	30	0	830.78	0.214	+			16464	HETEQKRL	8	63	520.7785279683144	1039.5425030034287	2	520.778076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HETEQKRL_	ENSG00000139644|ENST00000267115|TMBIM6;ENST00000553022.1_1_12:50146843-50152319:+|nuORF;nc|ENSG00000139644|P55061-2|TMBIM6	84.9155231211612	0.2928622555056503	5				NaN	NaN	0	NaN	265	2572	2838
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2840	13.861	NaN	6678.1	30	0	897.45	0.106			+	50244	WPICFLKK	8	68	517.7968126995805	1033.579072465961	2	517.7957763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WPICFLKK_	REV__ENSG00000128604|ENST00000357234|IRF5;REV__ENST00000461416.1_1_7:128582135-128587139:+|nuORF;REV__ENST00000488569.5_1_7:128577991-128586617:+|nuORF;REV__IRF5|p.E134*|1|0.33|ENSG00000128604|chr7:128946508-128946509|-/C|frameshift_variant;REV__IRF5|p.G205Wfs*12|1|0.42|ENSG00000128604|chr7:128947402-128947403|-/C|frameshift_variant;REV__nc|ENSG00000128604|Q13568-3|IRF5;REV__nc|ENSG00000128604|Q13568-4|IRF5;REV__nc|ENSG00000128604|Q13568-5|IRF5;REV__nc|ENSG00000128604|Q13568-6|IRF5;REV__nc|ENSG00000128604|Q13568|IRF5	44.116797842482775	0.6307669463330267	5				NaN	NaN	0	NaN	266	2572	2838
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2841	13.863	NaN	2931.1	30	0	496.38	0.106	+			49154	VVMGKQQSK	9	58	502.7827011356567	1003.5508493381134	2	502.7817077636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVMGKQQSK_	ENSG00000148225|ENST00000374193|WDR31;nc|ENSG00000148225|Q8NA23-2|WDR31	139.97047562133406	0.010493916756945389	5				NaN	NaN	0	NaN	267	2572	2838
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2842	13.865	NaN	3066.1	30	0	356.01	0.033				-1	 	0	59	439.7518846997407	877.4892164662814	2	439.7505187988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	268	2572	2838
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2848	13.882	NaN	2196	30	0	295.02	0.214	+			49220	VVNDAGRPK	9	47	478.26926736856836	NaN	0	478.269287109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVNDAGRPK_	ENSG00000109971|ENST00000534624|HSPA8;ENST00000508840.1_1_8:30095113-30095479:+|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;HSPA8|p.K569Dfs*6|1|0.3|ENSG00000109971|chr11:123058302-123058303|TC/-|frameshift_variant;nc|ENSG00000109971|P11142-2|HSPA8	85.16082228582465	0.053699699744190164	5				NaN	NaN	0	NaN	271	2575	2847
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2849	13.885	NaN	1542.1	30	0	389.04	0.106	+			5892	AVLAKAKAK	9	50	450.30474853515625	NaN	0	450.30474853515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVLAKAKAK_	ENSG00000165283|ENST00000356493|STOML2;nc|ENSG00000165283|Q9UJZ1-2|STOML2	90.77665401227738	0.04003078172695098	5				NaN	NaN	0	NaN	272	2575	2847
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2850	13.887	NaN	1722.6	30	0	297.35	0.036	+			16465	HETEQKRL	8	34	347.52081043299154	NaN	0	347.5206298828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HETEQKRL_	ENSG00000139644|ENST00000267115|TMBIM6;ENST00000553022.1_1_12:50146843-50152319:+|nuORF;nc|ENSG00000139644|P55061-2|TMBIM6	31.954861631926434	1.7418937515398478	5				NaN	NaN	0	NaN	273	2575	2847
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2856	13.902	NaN	1187.9	30	0	178.74	0.215			+	24705	LHGAVGAG	8	43	341.18742187889484	NaN	0	341.1873779296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LHGAVGAG_	REV__ENST00000418088.5_2_1:3659748-3662908:-|nuORF;REV__ENST00000452079.5_2_1:3659748-3662767:-|nuORF	43.626045697637714	1.7418937515398478	5				NaN	NaN	0	NaN	276	2578	2855
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2857	13.906	NaN	1431.9	30	0	508.83	0.106				-1	TKIAQFLE	8	37	496.2742796292097	NaN	0	496.27447509765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))TKIAQFLE_	ENSG00000112159|ENST00000369393|MDN1;MDN1|p.A5471S|1|0.16|ENSG00000112159|chr6:89646588-89646588|C/A|missense_variant	34.172542307311794	1.7418937515398478	5				NaN	NaN	0	NaN	277	2578	2855
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2858	13.908	NaN	1399.3	30	0	238.87	0.034	+			2864	ASAPLHQNK	9	46	483.26324391380456	964.5119348944091	2	483.26226806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASAPLHQNK_	ENSG00000123178|ENST00000361840|SPRYD7	65.46538089061403	0.16805504838372562	5				NaN	NaN	0	NaN	278	2578	2855
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2864	13.922	NaN	978.24	30	0	75.027	0.143			+	25198	LMIFNAQLG	9	40	511.7695562309382	1021.5245595286764	2	511.76885986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LM(Oxidation (M))IFNAQLG_	REV__tr|U7T041|U7T041_FUSNUNa+/H+antiporterNhaCOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00718PE=3SV=1	40.5726180659479	0.4135428067754104	5				NaN	NaN	0	NaN	281	2581	2863
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2868	13.939	NaN	5021.7	30	0	1399.1	0.142	+			6189	AVQPAPTRK	9	54	484.28922243402064	966.5638919348413	2	484.2880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVQPAPTRK_	ENSG00000109686|ENST00000604030|SH3D19;ENST00000478503.6_1_4:152043245-152086876:-|nuORF;nc|ENSG00000109686|Q5HYK7-2|SH3D19;nc|ENSG00000109686|Q5HYK7|SH3D19	67.49366992349736	0.1516260258713357	5				NaN	NaN	0	NaN	282	2584	2867
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2874	13.958	NaN	3779.4	30	0	479.75	0.214	+			19812	KEDEKKQEL	9	61	573.8054569051174	1145.5963608770346	2	573.80419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEDEKKQEL_	ENSG00000138640|ENST00000264344|FAM13A;ENST00000508360.5_1_4:89653076-89671014:-|nuORF;ENST00000511573.5_1_4:89649686-89680064:-|nuORF;nc|ENSG00000138640|O94988-1|FAM13A;nc|ENSG00000138640|O94988-3|FAM13A;nc|ENSG00000138640|O94988-5|FAM13A;nc|ENSG00000138640|O94988-6|FAM13A	164.45504665044191	0.003713414289755139	5				NaN	NaN	0	NaN	285	2587	2873
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2875	13.962	NaN	5488.1	30	0	1810.8	0.106	+			15095	GTQIHKVCK	9	55	535.7941448394358	1069.5737367456716	2	535.7926635742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GTQIHKVC(Carbamidomethyl (C))K_	ENST00000594085.5_1_19:40854624-40871501:+|nuORF	98.62937762414208	0.04060045538121712	5				NaN	NaN	0	NaN	286	2587	2873
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2876	13.964	NaN	5461.3	30	0	2390.3	0.106				-1	GTQIHKVCK	9	38	357.5307984473436	NaN	0	357.53082275390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_GTQIHKVC(Carbamidomethyl (C))K_	ENST00000594085.5_1_19:40854624-40871501:+|nuORF	30.317721548370564	0.32449924987115025	5				NaN	NaN	0	NaN	287	2587	2873
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2877	13.966	NaN	1229.1	30	0	106.29	0.106	+			3407	ASQGEVVRK	9	50	487.2750549316406	NaN	0	487.2750549316406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASQGEVVRK_	ENSG00000136628|ENST00000366923|EPRS1	45.97224482568171	0.23445038899310136	5				NaN	NaN	0	NaN	288	2587	2873
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2878	13.967	NaN	890.27	30	0	227.1	0.106			+	32308	QTQLVQQELN	10	34	600.8158990359401	1199.6172451386801	2	600.8145751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QTQLVQQELN_	REV__GSE1|p.R1144Q|1|0.42|ENSG00000131149|chr16:85671010-85671010|G/A|missense_variant	38.753607047826485	0.5606299674732264	5				NaN	NaN	0	NaN	289	2587	2873
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2879	13.969	NaN	2789.9	30	0	518.34	0.106	+			5338	ATVPMSKKK	9	53	495.2945881044772	NaN	0	495.2943115234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATVPMSKKK_	ENSG00000100023|ENST00000398831|PPIL2;ENST00000462188.1_1_22:22049506-22049776:+|nuORF	62.107414245175825	0.1403307765918332	5				NaN	NaN	0	NaN	290	2587	2873
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2880	13.971	NaN	1345.9	30	0	465.19	0.037	+			24900	LKMEEEQKL	9	32	383.2066650390625	NaN	0	383.2066650390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LKMEEEQKL_	ENSG00000197724|ENST00000359246|PHF2;PHF2|p.S954Efs*9|1|0.47|ENSG00000197724|chr9:93676611-93676612|-/A|frameshift_variant	37.15910966729921	0.2899585034171616	5				NaN	NaN	0	NaN	291	2587	2873
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2889	13.991	NaN	3189.4	30	0	1259.6	0.214			+	21167	KKVSAMFHLGA	11	47	594.8299608993241	1187.645368865448	2	594.8289794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KKVSAMFHLGA_	REV__ENSG00000197603|ENST00000651892|CPLANE1;REV__nc|ENSG00000197603|Q9H799-5|CPLANE1;REV__nc|ENSG00000197603|Q9H799|CPLANE1	61.76455937419982	0.30770400073182314	5				NaN	NaN	0	NaN	297	2590	2888
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2890	13.995	NaN	3723	30	0	691.97	0.106	+			16411	HERCVSRNI	9	68	557.2823259786178	1112.5500990240355	2	557.7831420898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HERCVSRNI_	DGKG|p.M663Ifs*17|1|0.04|ENSG00000058866|chr3:186188308-186188308|C/-|frameshift_variant;ENSG00000058866|ENST00000265022|DGKG;ENST00000480809.5_1_3:185925300-186038248:-|nuORF;nc|ENSG00000058866|P49619-2|DGKG;nc|ENSG00000058866|P49619-3|DGKG	47.95952297671804	0.32689736945648856	5				NaN	NaN	0	NaN	298	2590	2888
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2891	13.997	NaN	3961.2	30	0	499.1	0.106	+			22251	KTALSWVKK	9	51	530.8286744744743	1059.6427960157484	2	530.8284912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KTALSWVKK_	ACTR3B-JMJD1C|1|fusion;ENSG00000171988|ENST00000399262|JMJD1C;JMJD1C|p.A2114Cfs*5|1|0.04|ENSG00000171988|chr10:63189399-63189400|-/T|frameshift_variant;JMJD1C|p.I2113Kfs*18|1|0.04|ENSG00000171988|chr10:63189400-63189401|-/TT|frameshift_variant;nc|ENSG00000171988|Q15652-3|JMJD1C	61.691277971877994	0.19951612995419254	5				NaN	NaN	0	NaN	299	2590	2888
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2892	13.998	NaN	2381.4	30	0	224.8	0.106				-1	 	0	64	457.75185689792556	913.4891608626511	2	457.7749328613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	300	2590	2888
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2893	14	NaN	7436.4	30	0	5684.3	0.106				-1	KERMPRDIK	9	35	396.8889175941066	1187.64492338252	3	396.8877868652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_KERM(Oxidation (M))PRDIK_	ENST00000602566.5_1_1:120594349-120596770:-|nuORF	36.446750945000026	0.4619375763483977	5				NaN	NaN	0	NaN	301	2590	2888
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2894	14.002	NaN	19074	30	0	5707.7	0.106				-1	APRRGRCH	8	54	337.17931885980784	1008.5161271796235	3	337.1786804199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_APRRGRC(Carbamidomethyl (C))H_	ENST00000372257.6_1_1:44820675-44820723:-|nuORF	25.450171626174864	0.7628259754767981	5				NaN	NaN	0	NaN	302	2590	2888
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2895	14.004	NaN	717.26	30	0	76.543	0.038	+			12960	GETEANNHKKL	11	29	620.8192749023438	NaN	0	620.8192749023438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GETEANNHKKL_	ENSG00000126261|ENST00000246548|UBA2;ENST00000420734.1_1_1:87510839-87511187:-|nuORF;nc|ENSG00000126261|Q9UBT2-2|UBA2	16.52985593315525	0.456735970842152	5				NaN	NaN	0	NaN	303	2590	2888
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2909	14.033	NaN	7138.8	30	0	1197.9	0.214	+			34212	RTDTASRLK	9	62	349.86831283097337	1046.5831090931201	3	349.868408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTDTASRLK_	ENSG00000054654|ENST00000555002|SYNE2;ENST00000394768.6_2_14:64542710-64692241:+|nuORF;ENST00000554805.6_2_14:64676062-64692241:+|nuORF;ENST00000555022.5_2_14:64671104-64692241:+|nuORF;nc|ENSG00000054654|Q8WXH0-13|SYNE2;nc|ENSG00000054654|Q8WXH0-3|SYNE2;nc|ENSG00000054654|Q8WXH0-4|SYNE2;nc|ENSG00000054654|Q8WXH0-7|SYNE2;nc|ENSG00000054654|Q8WXH0|SYNE2;SYNE2|p.S6651Rfs*83|1|0.29|ENSG00000054654|chr14:64220596-64220597|-/G|frameshift_variant	72.2432373244024	0.13108886737667413	5				NaN	NaN	0	NaN	314	2593	2908
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2910	14.036	NaN	1490.5	30	0	214.4	0.035			+	25659	LRAHRLPGE	9	47	524.803466796875	NaN	0	524.803466796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LRAHRLPGE_	REV__ENST00000381168.7_1_11:2187868-2190906:-|nuORF	23.04248740728303	0.3589936788096251	5				NaN	NaN	0	NaN	315	2593	2908
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2920	14.058	NaN	2523.3	30	0	377.6	0.214	+			39384	STDKQTCLK	9	53	540.7732462275522	1079.5319395219044	2	540.772216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_STDKQTC(Carbamidomethyl (C))LK_	ENSG00000198788|ENST00000675028|MUC2;nc|ENSG00000198788|Q02817|MUC2	96.0336014099291	0.047854655524928534	5				NaN	NaN	0	NaN	322	2596	2919
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2921	14.062	NaN	899.76	30	0	178.7	0.034				-1	 	0	33	457.75185689792556	913.4891608626511	2	457.7506103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	323	2596	2919
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2927	14.077	NaN	1120.6	30	0	166.01	0.214	+			4392	ATHLVTKAK	9	41	484.79836622659616	NaN	0	484.7985534667969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATHLVTKAK_	ENSG00000160584|ENST00000445177|SIK3;ENST00000485363.1_1_11:116775672-116969011:-|nuORF;nc|ENSG00000160584|Q9Y2K2-7|SIK3;nc|ENSG00000160584|Q9Y2K2-8|SIK3;nc|ENSG00000160584|Q9Y2K2|SIK3;SIK3|p.F285Lfs*9|1|0.33|ENSG00000160584|chr11:116896263-116896263|A/-|frameshift_variant	52.936696900407355	0.1864545979552969	5				NaN	NaN	0	NaN	326	2599	2926
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2928	14.081	NaN	1149.8	30	0	148.94	0.037	+			8227	EAEQLRRQK	9	33	579.3240966796875	NaN	0	579.3240966796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EAEQLRRQK_	ENSG00000149503|ENST00000394818|INCENP;nc|ENSG00000149503|Q9NQS7-2|INCENP	22.579656572578934	0.3605601358598771	5				NaN	NaN	0	NaN	327	2599	2926
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2935	14.097	NaN	5990.3	30	0	3734.5	0.214			+	-1	SVLMALCFI	9	38	338.1780470661855	1011.5123117987566	3	338.1773376464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_SVLM(Oxidation (M))ALCFI_	REV__ENST00000255759.10_1_16:15960001-15960121:-|nuORF	32.81241826257853	0.4965981579233955	5				NaN	NaN	0	NaN	331	2602	2934
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2936	14.101	NaN	1872.2	30	0	496.02	0.106	+			9724	EMTINMLNA	9	45	518.7427713191036	1035.470989705007	2	518.7416381835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EMTINMLNA_	ANKRD18A|p.K865Rfs*16|1|0.35|ENSG00000180071|chr9:38577200-38577200|T/-|frameshift_variant;ENSG00000180071|ENST00000399703|ANKRD18A;ENSG00000230453|ENST00000684830|ANKRD18B;nc|ENSG00000230453|A2A2Z9|ANKRD18B	35.61828744233558	0.47037581924408073	5				NaN	NaN	0	NaN	332	2602	2934
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2937	14.103	NaN	1797.8	30	0	471.47	0.106				-1	LSVFSCRTSK	10	57	592.8063930806452	1183.5982332280903	2	592.8050537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LSVFSC(Carbamidomethyl (C))RTSK_	ENST00000251849.8_1_3:12653539-12660087:-|nuORF	42.86426827375447	0.522752283233888	5				NaN	NaN	0	NaN	333	2602	2934
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2938	14.105	NaN	659.44	30	0	270.69	0.033				-1	 	0	26	420.22312095819706	838.4316889831941	2	420.22235107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	334	2602	2934
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2943	14.119	NaN	1211.3	30	0	140.04	0.214	+			9050	EGGCKKKKS	9	33	482.76567625448155	963.5167995757631	2	482.76513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EGGCKKKKS_	ENSG00000106443|ENST00000634607|PHF14;ENST00000490957.5_1_7:11013950-11101713:+|nuORF;nc|ENSG00000106443|O94880-1|PHF14;PHF14|p.M316Wfs*5|1|0.43|ENSG00000106443|chr7:10990743-10990743|A/-|frameshift_variant	25.57405402267927	0.5642445186134241	5				NaN	NaN	0	NaN	336	2605	2942
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2944	14.123	NaN	1098.2	30	0	220.59	0.035				-1	QFSMTFLF	8	46	518.7423095703125	NaN	0	518.7423095703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_QFSM(Oxidation (M))TFLF_	ENST00000565985.1_1_16:75611125-75611215:+|nuORF	31.954861631926434	1.7418937515398478	5				NaN	NaN	0	NaN	337	2605	2942
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2953	14.154	NaN	3736.8	30	0	1137.4	0.214	+			6176	AVQKKTFTK	9	66	525.82006537732	1049.62557782144	2	525.8197021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVQKKTFTK_	ENSG00000115306|ENST00000356805|SPTBN1;ENSG00000160460|ENST00000598249|SPTBN4;ENSG00000173898|ENST00000533211|SPTBN2;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1;nc|ENSG00000160460|Q9H254-2|SPTBN4;nc|ENSG00000160460|Q9H254-4|SPTBN4;nc|ENSG00000173898|O15020-2|SPTBN2;SPTBN1|p.K503Rfs*24|1|0.06|ENSG00000115306|chr2:54626095-54626095|G/-|frameshift_variant;SPTBN2|p.P924Qfs*35|1|0.39|ENSG00000173898|chr11:66701629-66701629|G/-|frameshift_variant	107.45493779368988	0.031594950556992824	5				NaN	NaN	0	NaN	340	2611	2952
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2954	14.157	NaN	9244.7	30	0	1478.8	0.036				-1	 	0	63	350.8823233746262	1049.6251407240786	3	350.8819580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	341	2611	2952
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2959	14.172	NaN	4589.8	30	0	1644.4	0.141				-1	 	0	59	443.26244259942064	884.5103322656413	2	443.2613525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	343	2614	2958
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2964	14.189	NaN	1277.6	30	0	413.19	0.212				-1	HHCLCLLSFS	10	37	637.2926862536109	1272.5708195740217	2	637.2909545898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_HHC(Carbamidomethyl (C))LC(Carbamidomethyl (C))LLSFS_	ENST00000468355.5_1_20:4850310-4850382:-|nuORF	30.503639358989545	0.6307262373768582	5				NaN	NaN	0	NaN	345	2617	2963
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2965	14.193	NaN	2703.3	30	0	864.72	0.036			+	45940	VARSREKAV	9	39	339.2059132659836	1014.5959103981509	3	339.20477294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VARSREKAV_	REV__ENST00000470379.1_1_1:167408664-167408865:-|nuORF	27.882242232435846	0.5426732730940306	5				NaN	NaN	0	NaN	346	2617	2963
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2972	14.209	NaN	2822.5	30	0	1505.9	0.143	+			32412	QVFKTHKK	8	49	508.3051534098674	1014.5957538865348	2	508.3034973144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QVFKTHKK_	ENSG00000170364|ENST00000358065|SETMAR;nc|ENSG00000170364|Q53H47-2|SETMAR;nc|ENSG00000170364|Q53H47-3|SETMAR	23.04248740728303	0.7814162927298575	5				NaN	NaN	0	NaN	350	2620	2971
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2976	14.226	NaN	3490.6	30	0	443.17	0.143				-1	 	0	65	514.7976746124936	1027.580796291787	2	514.7964477539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	351	2623	2975
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2981	14.242	NaN	4372	30	0	1025.2	0.144			+	-1	KVMNCLSIK	9	68	526.2867119076258	1050.5588708820515	2	526.2858276367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_KVM(Oxidation (M))NCLSIK_	REV__ENSG00000088053|ENST00000310373|GP6	47.657333605630114	0.33044192980041115	5				NaN	NaN	0	NaN	353	2626	2980
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2987	14.259	NaN	4079.2	30	0	1607.6	0.214	+			14689	GTIGHVAHGK	10	59	488.7713161890793	975.5280794449586	2	488.7696533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTIGHVAHGK_	EIF2S3|p.I441Nfs*4|1|0.29|ENSG00000130741|chrX:24073223-24073224|-/A|frameshift_variant;ENSG00000130741|ENST00000253039|EIF2S3;ENSG00000180574|ENST00000538173|EIF2S3B;nc|ENSG00000180574|Q2VIR3-2|EIF2S3B	115.49404669440601	0.03369372856552391	5				NaN	NaN	0	NaN	356	2629	2986
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2988	14.263	NaN	8096.8	30	0	2350.8	0.106	+			32785	RASHPIVQK	9	67	345.87410642348675	1034.6004898706603	3	345.87347412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RASHPIVQK_	ENSG00000112159|ENST00000369393|MDN1;MDN1|p.E2692*|2|0.32|ENSG00000112159|chr6:89706133-89706134|-/A|frameshift_variant;MDN1|p.F2691Lfs*7|2|0.37|ENSG00000112159|chr6:89706134-89706134|A/-|frameshift_variant;MDN1|p.K2642Nfs*17|2|0.29|ENSG00000112159|chr6:89707449-89707449|T/-|frameshift_variant;MDN1|p.L4077Cfs*15|1|0.16|ENSG00000112159|chr6:89680625-89680625|G/-|frameshift_variant;MDN1|p.L5278Ffs*6|1|0.18|ENSG00000112159|chr6:89652273-89652274|-/A|frameshift_variant	51.19269402634007	0.2889735674168909	5				NaN	NaN	0	NaN	357	2629	2986
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2989	14.265	NaN	1163.6	30	0	138.03	0.106	+			22972	KVRDGDFLKL	10	44	595.8491633342385	NaN	0	595.8486328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KVRDGDFLKL_	ENST00000599736.5_1_19:4342437-4342713:-|nuORF	56.43379154798735	0.2634004003759929	5				NaN	NaN	0	NaN	358	2629	2986
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2990	14.267	NaN	1207.8	30	0	125.11	0.106				-1	 	0	38	440.767449864087	879.520346794974	2	440.7665100097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	359	2629	2986
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2991	14.268	NaN	949.56	30	0	345.05	0.035			+	21067	KKLKSGLTK	9	35	501.8379787308804	1001.6614045285609	2	501.8368835449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KKLKSGLTK_	REV__ENSG00000264522|ENST00000581312|OTUD7B;REV__nc|ENSG00000264522|Q6GQQ9-2|OTUD7B;REV__OTUD7B|p.G523Afs*2|1|0.07|ENSG00000264522|chr1:149944821-149944821|C/-|frameshift_variant	23.52269567125451	0.5834155526130771	5				NaN	NaN	0	NaN	360	2629	2986
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2996	14.284	NaN	2842.1	30	0	1069	0.214	+			4830	ATPEKSLHDK	10	39	563.299546102877	1124.584539272554	2	563.8011474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATPEKSLHDK_	ENSG00000077097|ENST00000264331|TOP2B;nc|ENSG00000077097|Q02880-2|TOP2B;TOP2B|p.S1441Kfs*20|1|0.32|ENSG00000077097|chr3:25606099-25606100|-/T|frameshift_variant;TOP2B|p.S1441Vfs*41|4|0.13|ENSG00000077097|chr3:25606100-25606100|T/-|frameshift_variant;TOP2B|p.S1476Ffs*11|2|0.3|ENSG00000077097|chr3:25604822-25604823|-/A|frameshift_variant	28.5767321226876	0.6464621404813697	5				NaN	NaN	0	NaN	362	2632	2995
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2997	14.287	NaN	3008.9	30	0	527.26	0.106	+			22020	KSGPVIAKR	9	49	478.3069541858268	954.5993554384536	2	478.3060607910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KSGPVIAKR_	ENSG00000109920|ENST00000263773|FNBP4;FNBP4|p.G931Efs*17|1|0.32|ENSG00000109920|chr11:47722991-47722991|T/-|frameshift_variant;FNBP4|p.K790Efs*7|1|0.34|ENSG00000109920|chr11:47724123-47724124|TT/-|frameshift_variant;FNBP4|p.P715Hfs*26|1|0.51|ENSG00000109920|chr11:47724643-47724643|G/-|frameshift_variant;FNBP4|p.W950Vfs*7|1|0.22|ENSG00000109920|chr11:47720045-47720046|-/T|frameshift_variant;nc|ENSG00000109920|Q8N3X1-2|FNBP4	88.17693792209575	0.07000514020414955	5				NaN	NaN	0	NaN	363	2632	2995
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2998	14.289	NaN	9337.1	30	0	2900.4	0.106			+	21694	KQFHHGKK	8	57	505.28871002224025	1008.5628671112805	2	505.2879943847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KQFHHGKK_	REV__RGSL1|p.C239G|1|0.28|ENSG00000121446|chr1:182473826-182473826|T/G|missense_variant	68.484700416344	0.4195245774506064	5				NaN	NaN	0	NaN	364	2632	2995
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	2999	14.291	NaN	3927.3	30	0	1832.2	0.106			+	1041	AEKLYYLAK	9	40	366.8789837017703	1097.615121705511	3	366.8785095214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEKLYYLAK_	REV__ENSG00000133985|ENST00000256367|TTC9	47.657333605630114	0.33044192980041115	5				NaN	NaN	0	NaN	365	2632	2995
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3000	14.293	NaN	564.05	30	0	116.69	0.106			+	50310	WSTVALTI	8	25	445.7509218167282	NaN	0	445.75128173828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_WSTVALTI_	REV__ENSG00000180658|ENST00000315453|OR2A4;REV__ENSG00000212807|ENST00000641810|OR2A42;REV__ENSG00000221970|ENST00000641044|OR2A1;REV__ENSG00000243896|ENST00000641841|OR2A7	19.359975847455235	1.7418937515398478	5				NaN	NaN	0	NaN	366	2632	2995
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3001	14.295	NaN	785.53	30	0	158.68	0.106			+	-1	SACVASLGVP	10	36	480.7449951171875	NaN	0	480.7449951171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_SAC(Carbamidomethyl (C))VASLGVP_	REV__ENST00000453304.5_1_4:96470007-96470169:-|nuORF	29.14955571784316	0.4044631218331212	5				NaN	NaN	0	NaN	367	2632	2995
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3002	14.296	NaN	1294.4	30	0	204.02	0.036			+	9591	ELKRRVQPS	9	34	556.8309936523438	NaN	0	556.8309936523438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ELKRRVQPS_	REV__ENSG00000249115|ENST00000203166|HAUS5;REV__ENST00000585968.5_1_19:36103696-36110661:+|nuORF;REV__nc|ENSG00000249115|O94927-2|HAUS5	20.94693142431847	0.3660861156085067	5				NaN	NaN	0	NaN	368	2632	2995
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3010	14.316	NaN	101560	30	0	25487	0.214				-1	 	0	70	337.194712073072	1008.5623068194161	3	337.1939392089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	373	2635	3009
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3011	14.32	NaN	12770	30	0	3110.6	0.106				-1	 	0	49	331.1910887156876	990.5514367472629	3	331.19049072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	374	2635	3009
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3012	14.322	NaN	4343.8	30	0	1451	0.106				-1	 	0	52	426.25396178882374	850.4933706444475	2	426.2527770996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	375	2635	3009
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3013	14.324	NaN	1722.7	30	0	351.37	0.106	+			37564	SLMILSGLPAP	11	48	549.8150493247681	1097.615545716336	2	549.813720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLMILSGLPAP_	ENSG00000080561|ENST00000262843|MID2;nc|ENSG00000080561|Q9UJV3-2|MID2	39.873155843976775	0.5596786644756743	5				NaN	NaN	0	NaN	376	2635	3009
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3014	14.325	NaN	1634.2	30	0	310.63	0.106	+			3082	ASGEGHHL	8	30	404.1916897058133	806.3688264784266	2	404.1906433105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASGEGHHL_	ENSG00000131771|ENST00000254079|PPP1R1B;ENST00000580772.1_1_17:37785452-37786437:+|nuORF;nc|ENSG00000131771|Q9UD71-2|PPP1R1B;PPP1R1B|p.N97Rfs*45|1|0.46|ENSG00000131771|chr17:39633928-39633931|TGAA/-|frameshift_variant	44.53106598305862	0.628196326904373	5				NaN	NaN	0	NaN	377	2635	3009
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3015	14.327	NaN	1927.7	30	0	261.99	0.106	+			31310	QILHGHTDIV	10	36	566.8080842253214	1131.6016155174427	2	566.806884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QILHGHTDIV_	ENSG00000183751|ENST00000568546|TBL3	26.063383197487333	0.6669871633831898	5				NaN	NaN	0	NaN	378	2635	3009
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3016	14.329	NaN	4042.7	30	0	1122.1	0.036				-1	CLDVNRDCL	9	35	554.2486920718413	1106.4828312104826	2	554.247802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_CLDVNRDC(Carbamidomethyl (C))L_	ENSG00000142661|ENST00000374434|MYOM3;ENST00000475306.1_1_1:24410803-24434643:-|nuORF;nc|ENSG00000142661|Q5VTT5-2|MYOM3	24.20275056022122	0.577060078256802	5				NaN	NaN	0	NaN	379	2635	3009
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3022	14.345	NaN	2888.3	30	0	482.84	0.214	+			14818	GTLGGSPTKK	10	52	473.2727099703273	944.5308670074546	2	473.2715759277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTLGGSPTKK_	ENSG00000110274|ENST00000278935|CEP164;ENST00000533223.1_1_11:117257895-117280842:+|nuORF;ENST00000533675.5_1_11:117265793-117282881:+|nuORF;nc|ENSG00000110274|Q9UPV0-2|CEP164	65.46538089061403	0.31613324008013116	5				NaN	NaN	0	NaN	382	2638	3021
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3023	14.349	NaN	1178.4	30	0	337.41	0.106				-1	PKDTDKACL	9	36	524.2619018554688	NaN	0	524.2619018554688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_PKDTDKAC(Carbamidomethyl (C))L_	ABCA13|p.A4442Pfs*3|1|0.06|ENSG00000179869|chr7:48506365-48506365|G/-|frameshift_variant;ENSG00000179869|ENST00000435803|ABCA13;nc|ENSG00000179869|Q86UQ4-3|ABCA13;nc|ENSG00000179869|Q86UQ4-4|ABCA13;nc|ENSG00000179869|Q86UQ4-5|ABCA13;nc|ENSG00000179869|Q86UQ4-6|ABCA13;nc|ENSG00000179869|Q86UQ4-7|ABCA13;nc|ENSG00000179869|Q86UQ4|ABCA13	31.529811441608018	0.3183796599642538	5				NaN	NaN	0	NaN	383	2638	3021
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3024	14.351	NaN	2306.7	30	0	770.99	0.106	+			48955	VVFPNAKVK	9	40	334.54150390625	NaN	0	334.54150390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVFPNAKVK_	tr|U7SF57|U7SF57_FUSNUCytidylatekinaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=cmkPE=3SV=1	42.396135135203025	0.2590952873412954	5				NaN	NaN	0	NaN	384	2638	3021
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3025	14.352	NaN	1020.7	30	0	309.72	0.106			+	22244	KTAKAQRSAQ	10	28	544.812825925417	NaN	0	544.8123779296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTAKAQRSAQ_	REV__DDX31|p.M178Cfs*42|1|0.4|ENSG00000125485|chr9:132662554-132662554|T/-|frameshift_variant;REV__ENSG00000125485|ENST00000372159|DDX31;REV__ENST00000482620.1_1_9:135536593-135545636:-|nuORF;REV__nc|ENSG00000125485|Q9H8H2-2|DDX31;REV__nc|ENSG00000125485|Q9H8H2-3|DDX31;REV__nc|ENSG00000125485|Q9H8H2-4|DDX31;REV__nc|ENSG00000125485|Q9H8H2-6|DDX31;REV__nc|ENSG00000125485|Q9H8H2|DDX31	15.333111300571575	0.4201028297492154	5				NaN	NaN	0	NaN	385	2638	3021
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3026	14.354	NaN	1232.2	30	0	210.91	0.106				-1	RDCLALSPRL	10	28	600.8275133719501	1199.6404738107	2	600.8268432617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_RDC(Carbamidomethyl (C))LALSPRL_	ENST00000430720.5_1_2:233562064-233599942:+|nuORF;ENST00000464402.5_1_2:233568191-233599942:+|nuORF;ENST00000482666.5_1_2:233568191-233595879:+|nuORF	31.529811441608018	0.6223461015008678	5				NaN	NaN	0	NaN	386	2638	3021
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3027	14.356	NaN	649.22	30	0	226.74	0.106			+	31297	QIGLSGPLAP	10	29	476.77581787109375	NaN	0	476.77581787109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QIGLSGPLAP_	REV__COL19A1|p.G753Afs*32|1|0.15|ENSG00000082293|chr6:70156686-70156686|G/-|frameshift_variant;REV__COL19A1|p.G807Wfs*14|1|0.34|ENSG00000082293|chr6:70165952-70165953|-/C|frameshift_variant;REV__COL19A1|p.S585Afs*8|1|0.2|ENSG00000082293|chr6:70144987-70144987|A/-|frameshift_variant;REV__ENSG00000082293|ENST00000620364|COL19A1	21.9598887501803	0.4201028297492154	5				NaN	NaN	0	NaN	387	2638	3021
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3028	14.358	NaN	258.19	30	0	37.826	0.035			+	10972	FEARLLAGP	9	19	325.18707275390625	NaN	0	325.18707275390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FEARLLAGP_	REV__nc|ENSG00000112787|Q9HCM7|FBRSL1	15.641811463095205	0.38404136392510424	5				NaN	NaN	0	NaN	388	2638	3021
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3036	14.376	NaN	2715.1	30	0	372.8	0.214			+	32895	RDPRYTEF	8	58	542.2638721841316	1082.5131914350632	2	542.2628173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RDPRYTEF_	REV__ENSG00000167680|ENST00000586582|SEMA6B;REV__nc|ENSG00000167680|Q9H3T3-3|SEMA6B	64.20726635412375	0.4601301477144759	5				NaN	NaN	0	NaN	393	2641	3035
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3037	14.38	NaN	1701.5	30	0	236.88	0.106	+			44675	TTHITKTVK	9	50	514.8092041015625	NaN	0	514.8092041015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTHITKTVK_	ENSG00000079819|ENST00000337057|EPB41L2;ENSG00000082397|ENST00000341928|EPB41L3;ENST00000368126.2_1_6:131179278-131186801:-|nuORF;ENST00000452150.6_1_6:131179278-131188835:-|nuORF;nc|ENSG00000079819|O43491-3|EPB41L2;nc|ENSG00000079819|O43491-4|EPB41L2;nc|ENSG00000082397|Q9Y2J2-2|EPB41L3;nc|ENSG00000082397|Q9Y2J2-4|EPB41L3	63.42647028704847	0.13470499157941143	5				NaN	NaN	0	NaN	394	2641	3035
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3038	14.382	NaN	1066.1	30	0	196.62	0.106			+	38069	SPSPGWERPGA	11	44	570.7730102539062	NaN	0	570.7730102539062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SPSPGWERPGA_	REV__ENST00000600059.5_1_19:48988799-49002658:-|nuORF	35.15202426646627	0.40875833226131825	5				NaN	NaN	0	NaN	395	2641	3035
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3039	14.384	NaN	1196.3	30	0	438.07	0.106			+	50200	WLRVELVPL	9	31	562.8472900390625	NaN	0	562.8472900390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_WLRVELVPL_	REV__ENST00000314686.9_1_3:40518691-40519449:+|nuORF	22.579656572578934	0.3605601358598771	5				NaN	NaN	0	NaN	396	2641	3035
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3040	14.386	NaN	577.79	30	0	177.46	0.106	+			17063	HRAPGGQAL	9	26	453.7478221605153	NaN	0	453.74725341796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HRAPGGQAL_	ENST00000522293.5_1_5:179225047-179225996:-|nuORF	21.9598887501803	0.3626577482100488	5				NaN	NaN	0	NaN	397	2641	3035
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3041	14.387	NaN	1404.8	30	0	478.43	0.035				-1	 	0	41	500.7673273736124	999.5201018140248	2	500.314208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	398	2641	3035
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3042	14.388	NaN	950.95	30	0	219.89	0.14			+	-1	IQMILICM	8	29	527.2596411290721	1052.504729324944	2	527.2586059570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C),2 Oxidation (M)	_IQM(Oxidation (M))ILIC(Carbamidomethyl (C))M(Oxidation (M))_	REV__ENSG00000011105|ENST00000011898|TSPAN9	23.036711822280957	0.7814608874307191	5				NaN	NaN	0	NaN	399	2641	3035
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3055	14.417	NaN	7442.9	30	0	3060.8	0.214	+			7500	DGKPGRQSR	9	62	500.7673273736124	999.5201018140248	2	500.7662658691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DGKPGRQSR_	BCOR|p.L1646Sfs*28|1|0.06|ENSG00000183337|chrX:40053926-40053926|G/-|frameshift_variant;BCOR|p.P1621Qfs*53|2|0.52|ENSG00000183337|chrX:40054000-40054000|G/-|frameshift_variant;ENSG00000183337|ENST00000378444|BCOR;nc|ENSG00000183337|Q6W2J9-2|BCOR;nc|ENSG00000183337|Q6W2J9-4|BCOR	61.691277971877994	0.19951612995419254	5				NaN	NaN	0	NaN	409	2644	3054
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3056	14.421	NaN	3226.7	30	0	486.56	0.106	+			21568	KPEALNKKAI	10	58	556.3469193688132	1110.6792858044264	2	556.3466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KPEALNKKAI_	ENSG00000198793|ENST00000361445|MTOR;ENST00000490931.1_1_1:11167544-11171580:-|nuORF	69.6276240434122	0.2803623802747859	5				NaN	NaN	0	NaN	410	2644	3054
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3057	14.423	NaN	976.41	30	0	246.01	0.106			+	15946	HAFQKRGA	8	33	457.75185689792556	913.4891608626511	2	457.7510986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HAFQKRGA_	REV__MYO18A|p.R691H|1|0.31|ENSG00000196535|chr17:29115819-29115819|C/T|missense_variant	28.2542754592877	0.7411748056684583	5				NaN	NaN	0	NaN	411	2644	3054
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3058	14.424	NaN	1356	30	0	144.79	0.036				-1	RSVACVDRK	9	39	545.7926579020335	1089.570762870867	2	545.7920532226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_RSVAC(Carbamidomethyl (C))VDRK_	ENSG00000095713|ENST00000370597|CRTAC1;nc|ENSG00000095713|Q9NQ79-2|CRTAC1;nc|ENSG00000095713|Q9NQ79-3|CRTAC1	40.05817265558897	0.419577045485086	5				NaN	NaN	0	NaN	412	2644	3054
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3064	14.44	NaN	873.45	30	0	186.76	0.142			+	21356	KMAKTTKK	8	35	468.2889244056052	934.5632958780104	2	468.2880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KMAKTTKK_	REV__ENST00000427859.5_1_1:239870879-239871044:-|nuORF	34.172542307311794	0.6954784234644539	5				NaN	NaN	0	NaN	415	2647	3063
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3071	14.473	NaN	1507.2	30	0	178.27	0.214	+			6128	AVQATKNYNK	10	57	568.8083204101836	1135.602087887167	2	568.8074951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVQATKNYNK_	DHDDS|p.V173Wfs*31|1|0.34|ENSG00000117682|chr1:26447630-26447630|G/-|frameshift_variant;ENSG00000117682|ENST00000236342|DHDDS;nc|ENSG00000117682|Q86SQ9-2|DHDDS	72.87924865735499	0.25379688738724415	5				NaN	NaN	0	NaN	416	2653	3070
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3072	14.477	NaN	2832.7	30	0	727.53	0.039	+			9099	EGKKVYRILK	10	42	411.92533353207375	NaN	0	411.5903625488281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EGKKVYRILK_	tr|U7SUV6|U7SUV6_FUSNUCobalaminbiosynthesisproteinCobDOS=FusobacteriumnucleatumCTI-5OX=1316586GN=cobDPE=3SV=1	16.006774744331256	0.4201028297492154	5				NaN	NaN	0	NaN	417	2653	3070
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3077	14.492	NaN	1676.2	30	0	169.13	0.214			+	-1	YTMHSKIV	8	50	497.7545349820362	993.4945170308724	2	497.7534484863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_YTM(Oxidation (M))HSKIV_	REV__ENSG00000164509|ENST00000652347|IL31RA;REV__nc|ENSG00000164509|Q8NI17-10|IL31RA;REV__nc|ENSG00000164509|Q8NI17-11|IL31RA;REV__nc|ENSG00000164509|Q8NI17-12|IL31RA;REV__nc|ENSG00000164509|Q8NI17-3|IL31RA;REV__nc|ENSG00000164509|Q8NI17-4|IL31RA;REV__nc|ENSG00000164509|Q8NI17-5|IL31RA;REV__nc|ENSG00000164509|Q8NI17-7|IL31RA;REV__nc|ENSG00000164509|Q8NI17-8|IL31RA;REV__nc|ENSG00000164509|Q8NI17-9|IL31RA;REV__nc|ENSG00000164509|Q8NI17|IL31RA	23.04248740728303	0.7814162927298575	5				NaN	NaN	0	NaN	419	2656	3076
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3078	14.496	NaN	873.88	30	0	146.92	0.037	+			6243	AVSEHRLSNK	10	37	570.8108348879415	1139.607116842683	2	570.81005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVSEHRLSNK_	ENSG00000104960|ENST00000391842|PTOV1;ENST00000598632.5_1_19:50354098-50358367:+|nuORF;ENST00000601501.5_1_19:50354350-50358367:+|nuORF;ENST00000602040.5_1_19:50354666-50357992:+|nuORF;nc|ENSG00000104960|Q86YD1-2|PTOV1	52.167168403610894	0.437078873413402	5				NaN	NaN	0	NaN	420	2656	3076
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3085	14.512	NaN	3723.4	30	0	542.62	0.214				-1	PLMDPHGLQ	9	55	512.2480629189365	1022.481572904673	2	512.2469482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_PLM(Oxidation (M))DPHGLQ_	ENST00000284503.6_1_8:11637143-11637398:+|nuORF;NEIL2|p.P65Lfs*79|1|0.25|ENSG00000154328|chr8:11779649-11779649|C/-|frameshift_variant	38.80614096846853	0.43426287593479557	5				NaN	NaN	0	NaN	424	2659	3084
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3086	14.516	NaN	1326.7	30	0	244.66	0.036	+			5270	ATVDKTVCKK	10	39	546.8091430664062	NaN	0	546.8091430664062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATVDKTVCKK_	ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1670Tfs*23|1|0.29|ENSG00000174231|chr17:1659487-1659487|C/-|frameshift_variant	37.50817390946774	0.3770175549877019	5				NaN	NaN	0	NaN	425	2659	3084
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3094	14.534	NaN	2492	30	0	1277.5	0.212	+			7016	CRWPSRVFQM	10	22	655.3182251842093	1308.6218974352184	2	655.8185424804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CRWPSRVFQM_	ENST00000413129.1_1_6:10514549-10514651:-|nuORF	16.006774744331256	0.7351120747673535	5				NaN	NaN	0	NaN	430	2662	3093
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3095	14.538	NaN	1731.6	30	0	100.64	0.106			+	16357	HEMLEARTL	9	55	550.2828979492188	NaN	0	550.2828979492188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HEMLEARTL_	REV__nc|ENSG00000229086|A6NM66|LINC01548	49.44154591367651	0.21054156626303966	5				NaN	NaN	0	NaN	431	2662	3093
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3096	14.54	NaN	509.08	30	0	167.92	0.036				-1	EGMLCIKVD	9	23	341.8327331542969	NaN	0	341.8327331542969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_EGM(Oxidation (M))LCIKVD_	ENST00000556198.1_3_12:25348525-25356891:+|nuORF	24.519189625965996	0.35377483217337163	5				NaN	NaN	0	NaN	432	2662	3093
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3103	14.556	NaN	10963	30	0	1700.1	0.214				-1	 	0	64	448.7463118173468	895.4780707014936	2	448.7458190917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	436	2665	3102
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3104	14.56	NaN	3836.1	30	0	1531.9	0.035	+			15100	GTQIHKVCK	9	57	507.28291522726386	1012.5512775213277	2	507.2835388183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTQIHKVCK_	ENST00000594085.5_1_19:40854624-40871501:+|nuORF	72.87924865735499	0.12833875048249987	5				NaN	NaN	0	NaN	437	2665	3102
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3112	14.578	NaN	6912.4	30	0	3925.4	0.214	+			10131	ESQGKSRE	8	40	460.72536809629	919.4361832593801	2	460.7242736816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ESQGKSRE_	ENSG00000154415|ENST00000284601|PPP1R3A;PPP1R3A|p.K861Nfs*74|1|0.35|ENSG00000154415|chr7:113878509-113878509|T/-|frameshift_variant	31.954861631926434	0.7126016770032289	5				NaN	NaN	0	NaN	442	2668	3111
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3113	14.582	NaN	3998.8	30	0	764.41	0.106				-1	 	0	51	558.8414506880105	1115.6683484428208	2	558.8409423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	443	2668	3111
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3114	14.584	NaN	3170	30	0	1302.9	0.106			+	3530	ASSPRSRRP	9	43	338.52328907692123	NaN	0	338.8575744628906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASSPRSRRP_	REV__NOTCH3|p.C1344Vfs*76|1|0.14|ENSG00000074181|chr19:15177899-15177899|G/-|frameshift_variant	19.359975847455235	0.3714571876404798	5				NaN	NaN	0	NaN	444	2668	3111
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3115	14.586	NaN	892.62	30	0	114.63	0.106	+			48274	VTDNGSPPK	9	46	457.7335253309914	913.4524977287829	2	457.732666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTDNGSPPK_	ENSG00000083857|ENST00000441802|FAT1;FAT1|p.G2934Vfs*3|2|0.37|ENSG00000083857|chr4:186617787-186617787|T/-|frameshift_variant;FAT1|p.N3847Yfs*7|1|0.03|ENSG00000083857|chr4:186601370-186601371|-/TTATA|frameshift_variant;FAT1|p.P3228Lfs*42|1|0.27|ENSG00000083857|chr4:186611556-186611556|G/-|frameshift_variant;FAT1|p.P4313Lfs*36|1|0.34|ENSG00000083857|chr4:186596602-186596602|G/-|frameshift_variant;FAT1|p.Q2933Hfs*14|1|0.33|ENSG00000083857|chr4:186617787-186617788|-/G|frameshift_variant;FAT1|p.T1364Yfs*8|1|0.23|ENSG00000083857|chr4:186636118-186636119|-/A|frameshift_variant;FAT1|p.V1878Cfs*8|2|0.22|ENSG00000083857|chr4:186620955-186620956|-/G|frameshift_variant	54.722347961057174	0.257609425301511	5				NaN	NaN	0	NaN	445	2668	3111
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3116	14.587	NaN	1940.7	30	0	432.11	0.106			+	-1	EVMLSGFM	8	42	473.2042306524349	NaN	0	472.76171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Oxidation (M)	_EVM(Oxidation (M))LSGFM(Oxidation (M))_	REV__LYPLA1|p.T185M|1|0.07|ENSG00000120992|chr8:54051097-54051097|G/A|missense_variant	33.51558372728122	1.7418937515398478	5				NaN	NaN	0	NaN	446	2668	3111
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3117	14.589	NaN	2134.4	30	0	379.46	0.033	+			3347	ASMVGGRAK	9	37	438.74087000873175	875.4671870842635	2	438.73974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASMVGGRAK_	ENSG00000165282|ENST00000378617|PIGO;ENST00000465745.6_1_9:35090240-35092764:-|nuORF;ENST00000474436.1_1_9:35090976-35092764:-|nuORF;PIGO|p.R731Vfs*17|3|0.41|ENSG00000165282|chr9:35091696-35091696|G/-|frameshift_variant	32.81241826257853	0.4965981579233955	5				NaN	NaN	0	NaN	447	2668	3111
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3124	14.606	NaN	2211.6	30	0	388.7	0.214			+	-1	CCGGQVQAAT	10	34	497.70595356568015	NaN	0	497.7060241699219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_C(Carbamidomethyl (C))CGGQVQAAT_	REV__ENST00000400274.5_1_21:47974515-47975895:+|nuORF	19.1035232394073	0.4201028297492154	5				NaN	NaN	0	NaN	451	2671	3123
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3125	14.609	NaN	1998.6	30	0	561.43	0.106				-1	 	0	40	413.2278592524825	412.2205827858825	1	413.22686767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	452	2671	3123
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3126	14.611	NaN	2164	30	0	779.83	0.106				-1	TPMETCDDI	9	32	520.6978246350843	NaN	0	520.6978149414062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_TPM(Oxidation (M))ETCDDI_	ADGRE2|p.I749Rfs*49|1|0.1|ENSG00000127507|chr19:14743716-14743722|TGCAAGA/-|frameshift_variant;ENSG00000127507|ENST00000315576|ADGRE2;ENST00000598500.1_1_19:14883058-14887568:-|nuORF;ENST00000599423.5_1_19:14879714-14887649:-|nuORF;nc|ENSG00000127507|Q9UHX3-2|ADGRE2;nc|ENSG00000127507|Q9UHX3-3|ADGRE2;nc|ENSG00000127507|Q9UHX3-4|ADGRE2;nc|ENSG00000127507|Q9UHX3-5|ADGRE2;nc|ENSG00000127507|Q9UHX3-6|ADGRE2	24.20275056022122	0.35506675290109213	5				NaN	NaN	0	NaN	453	2671	3123
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3127	14.613	NaN	1101	30	0	453.83	0.106			+	33681	RNSDSTHE	8	28	473.2042306524349	NaN	0	473.2041931152344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RNSDSTHE_	REV__ENSG00000187790|ENST00000267430|FANCM;REV__nc|ENSG00000187790|Q8IYD8-3|FANCM	12.959181472943097	1.7418937515398478	5				NaN	NaN	0	NaN	454	2671	3123
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3128	14.615	NaN	2682.7	30	0	381.34	0.106	+			48791	VTYTEHAKR	9	56	552.7944111759117	1103.5742694186233	2	552.793212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTYTEHAKR_	ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2	65.46538089061403	0.16805504838372562	5				NaN	NaN	0	NaN	455	2671	3123
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3129	14.617	NaN	633.53	30	0	237.89	0.106			+	9899	EQMCQIQEQTW	11	27	475.2020353647042	NaN	0	475.2021179199219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EQMCQIQEQTW_	REV__ENSG00000084070|ENST00000372718|SMAP2;REV__nc|ENSG00000084070|Q8WU79-2|SMAP2	21.780426970141523	0.456735970842152	5				NaN	NaN	0	NaN	456	2671	3123
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3130	14.618	NaN	3582.9	30	0	1256.5	0.037				-1	VRKNLLSDC	9	38	368.8654868199754	1103.5746310601262	3	368.864501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_VRKNLLSDC(Carbamidomethyl (C))_	ENSG00000112984|ENST00000394894|KIF20A;ENST00000503417.1_1_5:137515369-137517456:+|nuORF;nc|ENSG00000112984|O95235-2|KIF20A	25.57405402267927	0.5642445186134241	5				NaN	NaN	0	NaN	457	2671	3123
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3136	14.635	NaN	1867	30	0	585.56	0.214	+			48531	VTNPKRIAK	9	40	513.8257305308256	1025.636908128451	2	513.8251342773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTNPKRIAK_	ENSG00000074800|ENST00000234590|ENO1;ENST00000464920.1_1_1:8921421-8930582:-|nuORF;nc|ENSG00000074800|P06733-2|ENO1	41.42661286455405	0.403525789677298	5				NaN	NaN	0	NaN	460	2674	3135
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3137	14.638	NaN	1105.9	30	0	86.777	0.106				-1	GFLNWNEMQIT	11	47	684.8158474364008	NaN	0	684.816162109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_GFLNWNEM(Oxidation (M))QIT_	ENST00000602507.1_1_X:45629330-45629546:-|nuORF	22.579656572578934	0.456735970842152	5				NaN	NaN	0	NaN	461	2674	3135
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3138	14.64	NaN	1305.1	30	0	340.9	0.106			+	33612	RLRPWPGQ	8	47	505.28871002224025	1008.5628671112805	2	505.2876281738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RLRPWPGQ_	REV__ENST00000245222.8_1_19:49133008-49133209:+|nuORF	50.0245360154114	0.5941082100236891	5				NaN	NaN	0	NaN	462	2674	3135
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3139	14.642	NaN	3221.7	30	0	485.65	0.106			+	18418	ISAIIKSYS	9	59	491.28433564738424	980.5541183615685	2	491.2830505371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ISAIIKSYS_	REV__OR7A5|p.S223A|1|0.36|ENSG00000188269|chr19:14827575-14827575|A/C|missense_variant	60.97194046774394	0.20551255781574032	5				NaN	NaN	0	NaN	463	2674	3135
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3140	14.644	NaN	2277.8	30	0	495.87	0.036			+	19331	KAIRKPNTV	9	34	342.886391512606	1025.637345138018	3	342.8851013183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KAIRKPNTV_	REV__ENSG00000074800|ENST00000234590|ENO1;REV__ENST00000464920.1_1_1:8921421-8930582:-|nuORF;REV__nc|ENSG00000074800|P06733-2|ENO1	47.657333605630114	0.33044192980041115	5				NaN	NaN	0	NaN	464	2674	3135
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3146	14.661	NaN	4957.8	30	0	1262.2	0.214				-1	 	0	65	483.26293009598055	964.5113072587611	2	483.2616271972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	467	2677	3145
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3147	14.664	NaN	3184.7	30	0	390.08	0.106	+			38513	SSCGKFQTK	9	62	521.7537938012018	1041.4930346692036	2	521.7536010742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SSC(Carbamidomethyl (C))GKFQTK_	DDX24|p.A177Rfs*34|1|0.2|ENSG00000089737|chr14:94079221-94079221|G/-|frameshift_variant;DDX24|p.S507Ffs*17|1|0.26|ENSG00000089737|chr14:94060491-94060492|-/A|frameshift_variant;ENSG00000089737|ENST00000621632|DDX24;ENST00000555324.1_1_14:94545323-94547480:-|nuORF;ENST00000555762.1_1_14:94524146-94547480:-|nuORF;nc|ENSG00000089737|Q9GZR7-2|DDX24	132.757866228626	0.013877640931359021	5				NaN	NaN	0	NaN	468	2677	3145
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3148	14.666	NaN	1451.6	30	0	152.99	0.034	+			26710	LVKAQFIP	8	44	458.2847595214844	NaN	0	458.2847595214844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LVKAQFIP_	ENSG00000165617|ENST00000395153|DACT1;nc|ENSG00000165617|Q9NYF0|DACT1	35.200714571348534	1.7418937515398478	5				NaN	NaN	0	NaN	469	2677	3145
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3160	14.691	NaN	2022.9	30	0	321.64	0.214	+			5139	ATSTSSFKK	9	53	478.7559488980683	NaN	0	478.7557067871094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSTSSFKK_	ENSG00000113163|ENST00000643780|CERT1;nc|ENSG00000113163|Q9Y5P4-2|CERT1;nc|ENSG00000113163|Q9Y5P4-3|CERT1	60.11826168202944	0.14881452885248947	5				NaN	NaN	0	NaN	478	2680	3159
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3161	14.695	NaN	3391.5	30	0	1032.8	0.106	+			6720	CAHPQLLKG	9	33	322.8446960449219	NaN	0	322.8446960449219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_CAHPQLLKG_	ENSG00000139263|ENST00000320743|LRIG3;LRIG3|p.A746Cfs*16|2|0.45|ENSG00000139263|chr12:58877700-58877701|-/A|frameshift_variant;nc|ENSG00000139263|Q6UXM1-2|LRIG3	26.69291269510374	0.34280015626154364	5				NaN	NaN	0	NaN	479	2680	3159
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3162	14.697	NaN	991.21	30	0	116.25	0.106	+			966	AEKALGKAA	9	29	429.7550048828125	NaN	0	429.7550048828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEKALGKAA_	ENSG00000022277|ENST00000357348|RTF2	39.252832667884924	0.27938773122138094	5				NaN	NaN	0	NaN	480	2680	3159
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3163	14.699	NaN	12556	30	0	2686.2	0.106	+			22803	KVFGGTVHKK	10	78	550.8336932149306	1099.652833496661	2	550.8336181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KVFGGTVHKK_	ENSG00000163655|ENST00000496455|GMPS;GMPS|p.S473Lfs*26|1|0.37|ENSG00000163655|chr3:155922281-155922281|T/-|frameshift_variant;nc|ENSG00000163655|P49915-2|GMPS	123.61838826891271	0.022219295260619363	5				NaN	NaN	0	NaN	481	2680	3159
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3164	14.701	NaN	803.83	30	0	146.31	0.033	+			13168	GHLEDGAAD	9	33	442.6907200889479	NaN	0	442.6902770996094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GHLEDGAAD_	ENSG00000160219|ENST00000424127|GAB3;ENST00000496390.5_1_X:153928333-153979808:-|nuORF;nc|ENSG00000160219|Q8WWW8-3|GAB3	23.04248740728303	0.3589936788096251	5				NaN	NaN	0	NaN	482	2680	3159
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3176	14.726	NaN	3023.2	30	0	326.79	0.214	+			26243	LSSRRGCLQ	9	67	510.2723474522238	1018.5301419712476	2	510.2718811035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSSRRGCLQ_	ENST00000315422.8_1_11:64577237-64577864:-|nuORF	98.58198989935565	0.04066992115528678	5				NaN	NaN	0	NaN	491	2683	3175
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3177	14.73	NaN	985.79	30	0	269.15	0.106			+	46727	VGPLRGGA	8	36	363.71653703550385	NaN	0	363.71636962890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VGPLRGGA_	REV__ENST00000378509.8_1_7:134001453-134001714:-|nuORF	23.036711822280957	1.7418937515398478	5				NaN	NaN	0	NaN	492	2683	3175
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3178	14.732	NaN	14424	30	0	4230	0.106	+			44856	TTTTTHITK	9	48	335.1860848832989	1002.5364252500967	3	335.18536376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TTTTTHITK_	ENSG00000079819|ENST00000337057|EPB41L2;ENSG00000082397|ENST00000341928|EPB41L3;ENST00000368126.2_1_6:131179278-131186801:-|nuORF;ENST00000452150.6_1_6:131179278-131188835:-|nuORF;nc|ENSG00000079819|O43491-3|EPB41L2;nc|ENSG00000079819|O43491-4|EPB41L2;nc|ENSG00000082397|Q9Y2J2-2|EPB41L3;nc|ENSG00000082397|Q9Y2J2-4|EPB41L3	23.52269567125451	0.5834155526130771	5				NaN	NaN	0	NaN	493	2683	3175
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3179	14.733	NaN	5716.3	30	0	1358.9	0.106			+	2712	AQSKIKSHL	9	52	337.8703344119706	1010.5891738361117	3	337.8697509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AQSKIKSHL_	REV__CAMKK2|p.G550Efs*7|1|0.34|ENSG00000110931|chr12:121240817-121240817|C/-|frameshift_variant;REV__ENSG00000110931|ENST00000404169|CAMKK2;REV__nc|ENSG00000110931|Q96RR4-2|CAMKK2;REV__nc|ENSG00000110931|Q96RR4-3|CAMKK2;REV__nc|ENSG00000110931|Q96RR4-4|CAMKK2;REV__nc|ENSG00000110931|Q96RR4-5|CAMKK2;REV__nc|ENSG00000110931|Q96RR4-6|CAMKK2;REV__nc|ENSG00000110931|Q96RR4-7|CAMKK2	42.86426827375447	0.38666266728046506	5				NaN	NaN	0	NaN	494	2683	3175
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3180	14.735	NaN	900.33	30	0	171.13	0.106			+	-1	QARPQMLKR	9	31	381.8851318359375	NaN	0	381.8851318359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_QARPQM(Oxidation (M))LKR_	REV__ENST00000596924.1_1_19:58858250-58858792:-|nuORF	23.52269567125451	0.3573684076213556	5				NaN	NaN	0	NaN	495	2683	3175
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3181	14.737	NaN	403.68	30	0	100.71	0.033	+			2836	ASAGVISKK	9	25	430.76343887453964	NaN	0	430.7626953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASAGVISKK_	ENSG00000162086|ENST00000669516|ZNF75A;nc|ENSG00000162086|Q96N20|ZNF75A	17.468008924990375	0.37786057458515737	5				NaN	NaN	0	NaN	496	2683	3175
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3193	14.762	NaN	1237.9	30	0	157.67	0.214	+			5616	AVCKAGAVEK	10	47	516.7792955858908	NaN	0	516.7791748046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_AVC(Carbamidomethyl (C))KAGAVEK_	ENO1|p.D318Mfs*5|1|0.43|ENSG00000074800|chr1:8864006-8864006|C/-|frameshift_variant;ENSG00000074800|ENST00000234590|ENO1;ENST00000464920.1_1_1:8921421-8930582:-|nuORF;nc|ENSG00000074800|P06733-2|ENO1	61.691277971877994	0.22046696034287383	5				NaN	NaN	0	NaN	505	2686	3192
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3194	14.766	NaN	1066	30	0	182.07	0.036	+			5095	ATSNVHMVKK	10	43	557.8053390441904	NaN	0	557.80517578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATSNVHMVKK_	ENSG00000197256|ENST00000586659|KANK2;ENST00000590400.1_1_19:11303345-11305238:-|nuORF;KANK2|p.P430Rfs*5|1|0.23|ENSG00000197256|chr19:11178681-11178681|G/-|frameshift_variant;nc|ENSG00000197256|Q63ZY3-2|KANK2;nc|ENSG00000197256|Q63ZY3-3|KANK2	55.721020083383095	0.26922100141337213	5				NaN	NaN	0	NaN	506	2686	3192
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3205	14.799	NaN	1066.7	30	0	257.34	0.141			+	30410	PWAGPQEG	8	30	421.1940191504953	840.3734853677906	2	421.19305419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PWAGPQEG_	REV__ENSG00000167393|ENST00000390665|PPP2R3B	15.63621529709179	0.7929342111279789	5				NaN	NaN	0	NaN	511	2692	3204
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3212	14.817	NaN	2147.7	30	0	321.3	0.142	+			39620	STIATSHPK	9	47	471.25757894372816	940.5006049542563	2	471.2562561035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STIATSHPK_	ENSG00000007952|ENST00000372966|NOX1;nc|ENSG00000007952|Q9Y5S8-3|NOX1	82.24051045832904	0.08786059719216216	5				NaN	NaN	0	NaN	515	2695	3211
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3217	14.834	NaN	2095.9	30	0	491.71	0.144	+			22376	KTIDASVSKK	10	51	538.8206069226546	1075.6266609121092	2	538.8197021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTIDASVSKK_	ENSG00000171681|ENST00000261168|ATF7IP;ENST00000535179.1_1_12:14619386-14628955:+|nuORF;ENST00000537653.5_1_12:14576849-14628955:+|nuORF;nc|ENSG00000171681|Q6VMQ6-2|ATF7IP;nc|ENSG00000171681|Q6VMQ6-4|ATF7IP;nc|ENSG00000171681|Q6VMQ6-5|ATF7IP	86.18897241530135	0.15289278403033058	5				NaN	NaN	0	NaN	517	2698	3216
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3223	14.853	NaN	3587	30	0	526.33	0.214	+			31446	QKRSMGLTL	9	70	525.2918272329304	1048.5691015326606	2	525.2916870117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_QKRSM(Oxidation (M))GLTL_	ARHGEF12|p.G1290Afs*71|1|0.09|ENSG00000196914|chr11:120480061-120480062|-/CTGCAAGAATTAAATTA|frameshift_variant;ENSG00000196914|ENST00000397843|ARHGEF12;ENST00000525960.1_1_11:120316133-120317795:+|nuORF;ENST00000529970.5_1_11:120278459-120348246:+|nuORF;nc|ENSG00000196914|Q9NZN5-2|ARHGEF12	90.77665401227738	0.06267569666681755	5				NaN	NaN	0	NaN	520	2701	3222
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3224	14.856	NaN	2197	30	0	278.71	0.106	+			34024	RSLASARPG	9	55	457.76325569784063	913.5119584624813	2	457.7617492675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RSLASARPG_	ENST00000251879.10_1_9:5629124-5629262:+|nuORF	62.107414245175825	0.1960472003779324	5				NaN	NaN	0	NaN	521	2701	3222
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3225	14.858	NaN	3751.1	30	0	1124.5	0.039				-1	TSMEDIVILMS	11	35	418.86791085845726	NaN	0	419.20318603515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_TSMEDIVILM(Oxidation (M))S_	tr|U7STK6|U7STK6_FUSNUArabinose-5-phosphateisomeraseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01093PE=3SV=1	24.231819034082204	0.456735970842152	5				NaN	NaN	0	NaN	522	2701	3222
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3236	14.882	NaN	3165.9	30	0	359.77	0.144	+			43009	TEKQKESTL	9	60	532.2868290848462	1062.5591052364923	2	532.28564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEKQKESTL_	ENSG00000153046|ENST00000397588|CDYL;nc|ENSG00000153046|Q9Y232|CDYL	80.45461616416974	0.09558281504443908	5				NaN	NaN	0	NaN	530	2704	3235
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3242	14.898	NaN	1078.4	30	0	180.77	0.142	+			12889	GESADAVKKA	10	47	488.25926062526554	974.5039683173311	2	488.2581787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GESADAVKKA_	ENSG00000114416|ENST00000357559|FXR1;ENST00000473375.1_1_3:180669142-180671642:+|nuORF;FXR1|p.N300Mfs*8|1|0.11|ENSG00000114416|chr3:180957832-180957832|A/-|frameshift_variant;FXR1|p.T526Sfs*13|1|0.07|ENSG00000114416|chr3:180970330-180970331|-/TCTGTATTATC|frameshift_variant;nc|ENSG00000114416|P51114-2|FXR1;nc|ENSG00000114416|P51114-3|FXR1	70.8162118820467	0.27065172005956	5				NaN	NaN	0	NaN	533	2707	3241
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3248	14.915	NaN	1601	30	0	318.92	0.214	+			51154	YPAQGPTPPA	10	47	499.75090574693945	997.4872585606789	2	499.7497863769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YPAQGPTPPA_	ENST00000553080.1_1_16:715614-715659:+|nuORF	37.81151784470057	0.569310847604193	5				NaN	NaN	0	NaN	536	2710	3247
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3249	14.919	NaN	2127.3	30	0	938.49	0.037			+	-1	ATVIVIMLMI	10	24	373.8868284797223	NaN	0	373.55218505859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_ATVIVIMLM(Oxidation (M))I_	REV__ENST00000415527.1_1_2:38976301-38976731:-|nuORF	17.468008924990375	0.4201028297492154	5				NaN	NaN	0	NaN	537	2710	3247
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3254	14.933	NaN	1191.5	30	0	526.45	0.144				-1	LGNFKSRVR	9	34	559.825900355824	NaN	0	559.8262939453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LGNFKSRVR_	ENSG00000165076|ENST00000350549|PRSS37;PRSS37|p.D74E|1|0.37|ENSG00000165076|chr7:141838068-141838068|G/T|missense_variant	22.579656572578934	0.3605601358598771	5				NaN	NaN	0	NaN	539	2713	3253
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3260	14.95	NaN	2761.1	30	0	589.47	0.214	+			5661	AVDPSSGHPR	10	48	511.7554291849546	1021.4963054367092	2	511.7546081542969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVDPSSGHPR_	ENSG00000164323|ENST00000458385|CFAP97	46.45678178249821	0.4896490706773647	5				NaN	NaN	0	NaN	542	2716	3259
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3261	14.954	NaN	4546.9	30	0	2197	0.035				-1	GVCGKGFKK	9	39	327.51701177672567	979.529205930377	3	327.5162658691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GVC(Carbamidomethyl (C))GKGFKK_	ENSG00000167625|ENST00000301215|ZNF526	32.81241826257853	0.4965981579233955	5				NaN	NaN	0	NaN	543	2716	3259
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3267	14.969	NaN	1112.5	30	0	219.07	0.215				-1	 	0	37	448.7463118173468	895.4780707014936	2	448.74627685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	546	2719	3266
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3268	14.973	NaN	1423.2	30	0	445.28	0.035	+			11446	FMPLEVKK	8	45	496.28250904849597	NaN	0	496.28204345703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FMPLEVKK_	ENST00000412830.7_1_12:108104209-108104269:+|nuORF	55.50420428727701	1.7418937515398478	5				NaN	NaN	0	NaN	547	2719	3266
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3275	14.989	NaN	15235	30	0	8100.4	0.214	+			17912	IGIDKYLY	8	44	328.8509917713012	983.5311459141037	3	328.8502197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IGIDKYLY_	nc|ENSG00000156515|P19367-2|HK1	26.79610172149135	0.7524337208463756	5				NaN	NaN	0	NaN	551	2722	3274
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3276	14.993	NaN	1890.6	30	0	302.65	0.106			+	20750	KGWQLPPR	8	54	491.28433564738424	980.5541183615685	2	491.283447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KGWQLPPR_	REV__ENSG00000144843|ENST00000357003|ADPRH;REV__ENST00000471850.1_1_3:119298364-119306722:+|nuORF	33.51558372728122	0.7005509609380386	5				NaN	NaN	0	NaN	552	2722	3274
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3277	14.995	NaN	3182.7	30	0	1155.9	0.106				-1	QMKCSLKGG	9	44	504.7525317590434	1007.4905105848868	2	504.7515563964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_QMKC(Carbamidomethyl (C))SLKGG_	ENSG00000100354|ENST00000454349|TNRC6B;nc|ENSG00000100354|Q9UPQ9-1|TNRC6B;nc|ENSG00000100354|Q9UPQ9-2|TNRC6B;TNRC6B|p.A1354Tfs*46|1|0.47|ENSG00000100354|chr22:40301265-40301266|-/ACCCAAC|frameshift_variant;TNRC6B|p.G1342Wfs*56|1|0.32|ENSG00000100354|chr22:40301234-40301235|-/T|frameshift_variant	32.81241826257853	0.4965981579233955	5				NaN	NaN	0	NaN	553	2722	3274
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3278	14.997	NaN	939.62	30	0	318.36	0.106				-1	 	0	32	407.72001149072787	813.4254700482558	2	407.7189636230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	554	2722	3274
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3279	14.999	NaN	2302.6	30	0	312.64	0.106	+			11262	FINEQVYR	8	56	534.7770594877178	1067.5395660422355	2	534.7764282226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FINEQVYR_	tr|U7T130|U7T130_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00875PE=4SV=1	42.396135135203025	0.6414440140393314	5				NaN	NaN	0	NaN	555	2722	3274
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3280	15	NaN	4519.8	30	0	1365.1	0.106			+	-1	QRQRHWEAMSQ	11	56	736.8432426938532	1471.6719324545063	2	736.8421020507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_QRQRHWEAM(Oxidation (M))SQ_	REV__ENSG00000203909|ENST00000370370|DPPA5	29.170058357718403	0.683821074385409	5				NaN	NaN	0	NaN	556	2722	3274
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3281	15.002	NaN	743.34	30	0	164.14	0.033			+	38068	SPSPDRHG	8	31	426.7019348144531	NaN	0	426.7019348144531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SPSPDRHG_	REV__ARHGEF40|p.A705Efs*26|1|0.07|ENSG00000165801|chr14:21078255-21078256|-/AGTTT|frameshift_variant;REV__ARHGEF40|p.H1487Tfs*15|3|0.37|ENSG00000165801|chr14:21088033-21088033|C/-|frameshift_variant;REV__ARHGEF40|p.P1111Lfs*5|2|0.26|ENSG00000165801|chr14:21082320-21082320|C/-|frameshift_variant;REV__ARHGEF40|p.R1076Gfs*18|1|0.19|ENSG00000165801|chr14:21082089-21082089|C/-|frameshift_variant;REV__ENSG00000165801|ENST00000298694|ARHGEF40;REV__ENST00000555232.5_1_14:21538555-21549271:+|nuORF;REV__nc|ENSG00000165801|Q8TER5-3|ARHGEF40;REV__nc|ENSG00000165801|Q8TER5-4|ARHGEF40	24.20275056022122	1.7418937515398478	5				NaN	NaN	0	NaN	557	2722	3274
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3286	15.017	NaN	1948.4	30	0	330.06	0.214	+			6344	AVTKYTSSK	9	51	492.77344308959727	983.5323332459946	2	492.77227783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVTKYTSSK_	ENSG00000146047|ENST00000274764|H2BC1;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000196890|ENST00000693095|H2BC26;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000436555.1_1_1:228651916-228652012:-|nuORF;nc|ENSG00000203814|Q5QNW6-2|H2BC18;nc|ENSG00000285480|A0A2R8Y619|H2BK1	35.15202426646627	0.4747332964206883	5				NaN	NaN	0	NaN	559	2725	3285
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3287	15.02	NaN	2523.8	30	0	411.09	0.106	+			32548	QVTEWLHVG	9	59	534.7770594877178	1067.5395660422355	2	534.7761840820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QVTEWLHVG_	ENST00000505526.1_1_5:271863-311637:+|nuORF	38.80614096846853	0.43426287593479557	5				NaN	NaN	0	NaN	560	2725	3285
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3288	15.022	NaN	1168.6	30	0	312.01	0.106	+			30426	PYFYGDRM	8	46	524.7305156900117	NaN	0	524.7301025390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PYFYGDRM_	ENSG00000128815|ENST00000325239|WDFY4;ENST00000465910.5_1_10:50154093-50174894:+|nuORF;nc|ENSG00000128815|Q6ZS81-4|WDFY4;nc|ENSG00000128815|Q6ZS81-5|WDFY4	25.450171626174864	1.7418937515398478	5				NaN	NaN	0	NaN	561	2725	3285
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3289	15.024	NaN	1329.1	30	0	329.09	0.035	+			5981	AVLRHYHA	8	30	322.84771728515625	NaN	0	322.84771728515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVLRHYHA_	ENSG00000184634|ENST00000374080|MED12;ENST00000462984.1_1_X:70346235-70347318:+|nuORF;MED12|p.E1337Kfs*8|1|0.26|ENSG00000184634|chrX:71130173-71130173|G/-|frameshift_variant;nc|ENSG00000184634|Q93074-2|MED12;nc|ENSG00000184634|Q93074-3|MED12	26.79610172149135	1.7418937515398478	5				NaN	NaN	0	NaN	562	2725	3285
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3299	15.048	NaN	3837.6	30	0	554.6	0.214	+			24514	LGKKEMHAF	9	60	538.7812487928185	1075.5479446524369	2	538.7805786132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LGKKEM(Oxidation (M))HAF_	ENSG00000108187|ENST00000358769|PBLD	73.97473282117947	0.12360187025703594	5				NaN	NaN	0	NaN	569	2728	3298
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3300	15.052	NaN	3212.4	30	0	662.37	0.106	+			24349	LFLSMRPQ	8	60	496.27170598850944	NaN	0	496.2717590332031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LFLSMRPQ_	ENST00000420827.2_1_4:68543339-68543378:-|nuORF	90.77665401227738	1.7418937515398478	5				NaN	NaN	0	NaN	570	2728	3298
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3301	15.054	NaN	1967.2	30	0	695.96	0.106	+			2543	AQAPLPPQVLR	11	37	595.3559791778483	1188.6974054224966	2	595.3545532226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AQAPLPPQVLR_	ENST00000488384.1_1_20:34144716-34145272:+|nuORF	19.1035232394073	0.7810393085260824	5				NaN	NaN	0	NaN	571	2728	3298
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3302	15.056	NaN	4993.5	30	0	1545.5	0.106	+			25042	LLIFLEEPP	9	39	357.5424434606714	1069.6055009822142	3	357.5416564941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LLIFLEEPP_	ENSG00000186281|ENST00000434632|GPAT2;ENST00000471757.5_1_2:96691131-96693504:-|nuORF;ENST00000482704.1_1_2:96692435-96692645:-|nuORF;ENST00000484440.5_1_2:96688852-96698107:-|nuORF;ENST00000486463.5_1_2:96687909-96693504:-|nuORF;nc|ENSG00000186281|Q6NUI2-3|GPAT2;nc|ENSG00000186281|Q6NUI2|GPAT2	26.69291269510374	0.5537881896960711	5				NaN	NaN	0	NaN	572	2728	3298
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3303	15.057	NaN	466.12	30	0	81.765	0.106	+			34997	SAATHLTSK	9	31	458.2485656738281	NaN	0	458.2485656738281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SAATHLTSK_	APPL1|p.L65Kfs*4|1|0.39|ENSG00000157500|chr3:57237529-57237530|TT/-|frameshift_variant;APPL1|p.R154Efs*6|1|0.31|ENSG00000157500|chr3:57242893-57242893|A/-|frameshift_variant;ENSG00000157500|ENST00000288266|APPL1;ENST00000482800.5_1_3:57261911-57301862:+|nuORF	42.86426827375447	0.2558691296974908	5				NaN	NaN	0	NaN	573	2728	3298
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3304	15.059	NaN	747.13	30	0	131.62	0.037	+			20987	KKFQKNEQQ	9	36	589.321198050243	NaN	0	589.3209228515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KKFQKNEQQ_	ENST00000578730.1_1_4:1243983-1244322:+|nuORF	47.95952297671804	0.22075498469600283	5				NaN	NaN	0	NaN	574	2728	3298
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3313	15.079	NaN	2350.3	30	0	339.02	0.214	+			18961	IVQNGKHFK	9	55	535.8106194651493	1069.6066859970986	2	535.810302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IVQNGKHFK_	ENSG00000163586|ENST00000295834|FABP1	73.97473282117947	0.12360187025703594	5				NaN	NaN	0	NaN	580	2731	3312
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3314	15.083	NaN	1662	30	0	293.74	0.106	+			43623	TINGHNAEVRK	11	55	619.8345947265625	NaN	0	619.8345947265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TINGHNAEVRK_	ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;ENST00000495810.1_1_7:26235422-26236427:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1	87.64055203540902	0.04801521801041685	5				NaN	NaN	0	NaN	581	2731	3312
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3315	15.085	NaN	1362.6	30	0	276.12	0.036	+			1683	AGTANPTVAKR	11	49	543.3083590327104	1084.6021651322208	2	543.3093872070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AGTANPTVAKR_	ENSG00000218336|ENST00000511685|TENM3;TENM3|p.G1986Dfs*16|1|0.07|ENSG00000218336|chr4:182792628-182792629|-/ATGGA|frameshift_variant;TENM3|p.Y2250Mfs*4|1|0.24|ENSG00000218336|chr4:182793414-182793414|T/-|frameshift_variant	51.52775601994872	0.4002081502334604	5				NaN	NaN	0	NaN	582	2731	3312
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3320	15.099	NaN	2050.6	30	0	474.66	0.141	+			45236	TVPVVIAW	8	48	442.7650879483119	883.5156229634238	2	442.76422119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVPVVIAW_	ATRN|p.P984Lfs*34|1|0.23|ENSG00000088812|chr20:3584079-3584079|C/-|frameshift_variant	29.841539824830324	0.7289191502596711	5				NaN	NaN	0	NaN	584	2734	3319
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3325	15.116	NaN	1979.9	30	0	175.5	0.214	+			42961	TEKAKEERL	9	50	552.307937862109	1102.601322791018	2	552.3087768554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEKAKEERL_	ENSG00000149503|ENST00000394818|INCENP;INCENP|p.E620D|1|0.06|ENSG00000149503|chr11:62145652-62145652|G/T|missense_variant;nc|ENSG00000149503|Q9NQS7-2|INCENP	68.84614121027924	0.14577793175421136	5				NaN	NaN	0	NaN	586	2737	3324
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3326	15.12	NaN	1060	30	0	213.37	0.036			+	31981	QRCQRRLL	8	41	536.8109591424256	1071.6073653516512	2	536.8104248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QRCQRRLL_	REV__ENST00000368875.6_2_1:151298654-151299818:-|nuORF;REV__ENST00000489223.2_1_1:151288133-151299818:-|nuORF	35.61828744233558	0.6843154725607303	5				NaN	NaN	0	NaN	587	2737	3324
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3331	15.135	NaN	6459.6	30	0	1693.6	0.215	+			39760	STITKIHSK	9	69	507.80164434436045	1013.5887357555209	2	507.8010559082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STITKIHSK_	ENSG00000138593|ENST00000559471|SECISBP2L;nc|ENSG00000138593|Q93073-2|SECISBP2L	182.3913890336628	0.0010559746847940753	5				NaN	NaN	0	NaN	589	2740	3330
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3332	15.139	NaN	4125.4	30	0	730.71	0.106	+			3652	ASYGSTTTK	9	50	458.2254758692161	914.4363988052322	2	458.2245788574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASYGSTTTK_	ENSG00000092108|ENST00000458591|SCFD1;ENST00000555259.5_1_14:31112578-31185169:+|nuORF;nc|ENSG00000092108|Q8WVM8-2|SCFD1;nc|ENSG00000092108|Q8WVM8-3|SCFD1	68.84614121027924	0.14577793175421136	5				NaN	NaN	0	NaN	590	2740	3330
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3333	15.141	NaN	6619.3	30	0	1206.8	0.036				-1	 	0	52	345.21054727954476	1032.6098124388343	3	345.21014404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	591	2740	3330
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3344	15.164	NaN	7546.7	30	0	690.61	0.214	+			2667	AQNAKVIEK	9	68	500.7926390456153	999.5707251580307	2	500.7925720214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AQNAKVIEK_	ENSG00000018610|ENST00000644802|STEEP1;ENST00000469448.1_1_X:118673692-118676584:-|nuORF;nc|ENSG00000018610|Q9H5V9-2|STEEP1;nc|ENSG00000018610|Q9H5V9-3|STEEP1	150.36159442982594	0.006784847064083231	5				NaN	NaN	0	NaN	599	2743	3343
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3345	15.168	NaN	7962.5	30	0	2535.3	0.036			+	13448	GLIFVAGAPIG	11	54	338.86956815126223	NaN	0	338.8696594238281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GLIFVAGAPIG_	REV__ENSG00000127418|ENST00000510644|FGFRL1	33.921630207806714	0.41424167740351664	5				NaN	NaN	0	NaN	600	2743	3343
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3354	15.188	NaN	3808.1	30	0	663	0.214	+			28651	NLKGVVYTTQ	10	69	561.8112467905319	1121.6079406478636	2	561.8103637695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NLKGVVYTTQ_	HMCN1|p.R5595Q|1|0.2|ENSG00000143341|chr1:186189754-186189754|G/A|missense_variant	62.107414245175825	0.3466735403679669	5				NaN	NaN	0	NaN	606	2746	3353
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3355	15.191	NaN	1484.2	30	0	198.88	0.106	+			40925	SVFRASKEL	9	51	518.7934672333612	1035.5723815335223	2	518.7930908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVFRASKEL_	ENSG00000132196|ENST00000254521|HSD17B7;ENST00000463037.5_1_1:162762392-162766419:+|nuORF;ENST00000485405.5_1_1:162760500-162767724:+|nuORF;nc|ENSG00000132196|P56937-2|HSD17B7;nc|ENSG00000132196|P56937-3|HSD17B7	47.657333605630114	0.33044192980041115	5				NaN	NaN	0	NaN	607	2746	3353
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3356	15.193	NaN	1786.2	30	0	202.94	0.106	+			29080	NTLNIDKLK	9	43	529.8148803710938	NaN	0	529.8148803710938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NTLNIDKLK_	ENSG00000139496|ENST00000381736|NUP58;ENST00000466694.5_1_13:25875911-25912925:+|nuORF;nc|ENSG00000139496|Q9BVL2-2|NUP58;nc|ENSG00000139496|Q9BVL2-3|NUP58	23.52269567125451	0.3573684076213556	5				NaN	NaN	0	NaN	608	2746	3353
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3357	15.195	NaN	1490.4	30	0	236.12	0.035	+			26356	LTASRRSSTA	10	47	525.29052734375	NaN	0	525.29052734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LTASRRSSTA_	EPS8L3|p.N273Tfs*33|1|0.43|ENSG00000198758|chr1:109757958-109757958|T/-|frameshift_variant	30.568863376406313	0.39980281766270914	5				NaN	NaN	0	NaN	609	2746	3353
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3361	15.21	NaN	1845.2	30	0	330.79	0.214	+			3392	ASQEGTIQK	9	43	481.2526007049283	960.4906484766566	2	481.2515869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASQEGTIQK_	ENSG00000172349|ENST00000683961|IL16;nc|ENSG00000172349|Q14005-2|IL16;nc|ENSG00000172349|Q14005-3|IL16;nc|ENSG00000172349|Q14005-4|IL16	83.6470233535746	0.08277643980271215	5				NaN	NaN	0	NaN	610	2749	3360
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3362	15.214	NaN	1972.5	30	0	847.4	0.106				-1	 	0	32	413.22776748659817	824.4409820399964	2	413.2271728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	611	2749	3360
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3363	15.216	NaN	2282.9	30	0	1017.8	0.039			+	31240	QHDQTQGQTQQ	11	44	649.791290677115	1297.5680284210298	2	649.79150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QHDQTQGQTQQ_	REV__MAGEB3|p.R19Q|1|0.13|ENSG00000198798|chrX:30235980-30235980|G/A|missense_variant	26.063383197487333	0.7164075632144343	5				NaN	NaN	0	NaN	612	2749	3360
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3374	15.242	NaN	11153	30	0	2106.4	0.214			+	27125	MAQIPGEPKK	10	75	549.8034938924909	1097.5924348517817	2	549.8031616210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MAQIPGEPKK_	REV__BCL9|p.F430Lfs*21|1|0.36|ENSG00000116128|chr1:147619443-147619443|T/-|frameshift_variant;REV__BCL9|p.I470Tfs*9|1|0.32|ENSG00000116128|chr1:147619564-147619571|TAGCGTGG/-|frameshift_variant;REV__BCL9|p.P1111Lfs*3|1|0.39|ENSG00000116128|chr1:147624005-147624005|G/-|frameshift_variant;REV__BCL9|p.P971Hfs*11|2|0.26|ENSG00000116128|chr1:147622275-147622275|C/-|frameshift_variant;REV__BCL9|p.Q1139Rfs*138|1|0.37|ENSG00000116128|chr1:147624089-147624089|C/-|frameshift_variant;REV__BCL9|p.Q1162Rfs*115|2|0.28|ENSG00000116128|chr1:147624156-147624156|G/-|frameshift_variant;REV__BCL9|p.V910Cfs*42|2|0.23|ENSG00000116128|chr1:147620874-147620875|-/C|frameshift_variant;REV__ENSG00000116128|ENST00000234739|BCL9	90.36981228632155	0.12895663264417576	5				NaN	NaN	0	NaN	620	2752	3373
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3375	15.246	NaN	2887.4	30	0	529.08	0.106				-1	 	0	56	486.28636187341584	970.5581708136317	2	486.7862243652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	621	2752	3373
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3376	15.248	NaN	2472.7	30	0	241.56	0.035			+	26542	LTRSTITTV	9	57	496.2936165066012	990.5726800800024	2	496.2923278808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LTRSTITTV_	REV__ENST00000519610.1_1_5:150534726-150534804:-|nuORF	56.72105179125745	0.24094814563026265	5				NaN	NaN	0	NaN	622	2752	3373
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3387	15.271	NaN	18346	30	0	1726.9	0.214			+	9201	EGRGEPEVR	9	88	514.760535828141	1027.5065187230819	2	514.759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EGRGEPEVR_	REV__ENST00000471517.5_1_19:38845366-38853372:+|nuORF	112.10723106719422	0.02684780151337622	5				NaN	NaN	0	NaN	630	2755	3386
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3388	15.275	NaN	12163	30	0	6061.9	0.106				-1	 	0	52	413.22776748659817	824.4409820399964	2	413.2261047363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	631	2755	3386
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3389	15.277	NaN	120250	30	0	32921	0.106	+			38691	SSKGPKRLE	9	80	334.529919128785	1000.5679279865551	3	334.5294189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSKGPKRLE_	ENSG00000101134|ENST00000262593|DOK5	71.87747018426188	0.13267044672804276	5				NaN	NaN	0	NaN	632	2755	3386
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3390	15.279	NaN	9374.2	30	0	2144.8	0.106	+			15561	GVFKETKQK	9	62	532.8095837777373	1063.6046146222745	2	532.8087768554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GVFKETKQK_	ENSG00000119927|ENST00000348367|GPAM	126.24258497203832	0.01742065577488747	5				NaN	NaN	0	NaN	633	2755	3386
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3391	15.28	NaN	792.79	30	0	133.35	0.106			+	21642	KPTKSFTISEM	11	29	634.8331909179688	NaN	0	634.8331909179688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KPTKSFTISEM_	REV__ENSG00000185245|ENST00000329125|GP1BA;REV__GP1BA|p.L531Wfs*22|1|0.36|ENSG00000185245|chr17:4934191-4934191|C/-|frameshift_variant;REV__GP1BA|p.S420Afs*52|1|0.4|ENSG00000185245|chr17:4933857-4933857|C/-|frameshift_variant;REV__GP1BA|p.T494Pfs*59|1|0.4|ENSG00000185245|chr17:4934078-4934078|A/-|frameshift_variant	20.31501182869353	0.456735970842152	5				NaN	NaN	0	NaN	634	2755	3386
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3392	15.282	NaN	1212.1	30	0	132.01	0.038	+			37784	SLYDKQQRGK	10	42	611.8305053710938	NaN	0	611.8305053710938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLYDKQQRGK_	ENSG00000129007|ENST00000467889|CALML4;nc|ENSG00000129007|Q96GE6|CALML4	35.17822180527639	0.3846679649904324	5				NaN	NaN	0	NaN	635	2755	3386
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3393	15.283	NaN	1256.3	30	0	232.57	0.141			+	30025	PPPSTNPW	8	47	448.2163321146564	NaN	0	448.217041015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PPPSTNPW_	REV__ENSG00000173714|ENST00000311378|WFIKKN2	31.954861631926434	1.7418937515398478	5				NaN	NaN	0	NaN	636	2755	3386
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3405	15.309	NaN	14910	30	0	8650.6	0.214	+			46777	VGWGRRPR	8	56	328.5264417885848	982.5574959659544	3	328.5257873535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VGWGRRPR_	ENST00000394518.6_1_15:86287994-86288120:+|nuORF	30.503639358989545	0.7238069182250283	5				NaN	NaN	0	NaN	645	2758	3404
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3406	15.313	NaN	17785	30	0	3453.1	0.106			+	-1	TIKEMSFK	8	58	513.2708216823353	1024.5270904314705	2	513.2699584960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))TIKEMSFK_	REV__ENST00000538969.5_1_7:80290452-80293776:+|nuORF	35.200714571348534	0.6875396545722289	5				NaN	NaN	0	NaN	646	2758	3404
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3407	15.315	NaN	11387	30	0	2250	0.106				-1	 	0	69	414.25926662075994	826.5039803083199	2	414.25823974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	647	2758	3404
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3408	15.316	NaN	5273.5	30	0	469.74	0.106	+			21090	KKPEDKKQ	8	72	500.7926390456153	999.5707251580307	2	501.2911376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KKPEDKKQ_	ENSG00000113141|ENST00000417647|IK;ENST00000515015.1_1_5:140038902-140040409:+|nuORF	47.91560031466742	0.6071945918984287	5				NaN	NaN	0	NaN	648	2758	3404
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3409	15.318	NaN	14863	30	0	1815	0.106	+			34102	RSQKPVMVK	9	81	358.21525533082496	1071.623936592675	3	358.214599609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RSQKPVMVK_	ENSG00000108107|ENST00000344063|RPL28;ENST00000412461.2_1_22:19043875-19044022:+|nuORF;ENST00000560583.5_1_19:55899571-55899697:+|nuORF	56.632244143249146	0.24168844994051353	5				NaN	NaN	0	NaN	649	2758	3404
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3410	15.32	NaN	7270	30	0	3416.7	0.106	+			5224	ATTTTVTTK	9	52	462.25668650215147	922.498820071103	2	462.2554626464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATTTTVTTK_	ENSG00000163349|ENST00000426820|HIPK1;HIPK1|p.N462*|1|0.27|ENSG00000163349|chr1:113955620-113955621|-/T|frameshift_variant;nc|ENSG00000163349|Q86Z02-2|HIPK1	93.1432384553994	0.056003526918089595	5				NaN	NaN	0	NaN	650	2758	3404
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3411	15.322	NaN	2259	30	0	740.45	0.035	+			21626	KPRPAAAAPS	10	32	322.5229168962755	964.5469212890265	3	322.52239990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KPRPAAAAPS_	nc|ENSG00000148057|Q5T6J7-2|IDNK	27.047317107675042	0.6589519614906109	5				NaN	NaN	0	NaN	651	2758	3404
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3423	15.347	NaN	27611	30	0	3765.7	0.214				-1	 	0	80	470.7592879109552	939.5040228887104	2	470.7581481933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	660	2761	3422
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3424	15.351	NaN	12165	30	0	2473.9	0.106	+			5268	ATVDKTVCK	9	72	511.27109527695137	NaN	0	511.2710876464844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_ATVDKTVC(Carbamidomethyl (C))K_	ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1670Tfs*23|1|0.29|ENSG00000174231|chr17:1659487-1659487|C/-|frameshift_variant	134.7655990226056	0.00014292611696254572	5				NaN	NaN	0	NaN	661	2761	3422
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3425	15.353	NaN	1738.4	30	0	360.68	0.106				-1	 	0	39	327.18509656440636	652.3556401956128	2	327.184326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	662	2761	3422
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3426	15.355	NaN	1800.2	30	0	579.68	0.106	+			8981	EFNIEKGQ	8	29	482.7388162660872	963.4630795989744	2	482.73736572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EFNIEKGQ_	ENST00000545001.2_1_12:64732273-64732573:-|nuORF	21.9598887501803	0.7897753010812679	5				NaN	NaN	0	NaN	663	2761	3422
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3427	15.356	NaN	1935.4	30	0	393.14	0.106	+			2924	ASCNQTLSK	9	53	504.74340631502747	1007.472259696855	2	504.7423095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_ASC(Carbamidomethyl (C))NQTLSK_	ENSG00000155256|ENST00000684270|ZFYVE27;ENST00000477521.5_1_10:99516996-99519054:+|nuORF;nc|ENSG00000155256|Q5T4F4-2|ZFYVE27;nc|ENSG00000155256|Q5T4F4-3|ZFYVE27;nc|ENSG00000155256|Q5T4F4-5|ZFYVE27;nc|ENSG00000155256|Q5T4F4-6|ZFYVE27;nc|ENSG00000155256|Q5T4F4-7|ZFYVE27;nc|ENSG00000155256|Q5T4F4-8|ZFYVE27	58.2462437865262	0.22823408064396822	5				NaN	NaN	0	NaN	664	2761	3422
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3428	15.358	NaN	1013.1	30	0	278.34	0.036	+			36607	SGEKISSWQ	9	30	341.17056939898737	1020.4898787971622	3	341.1698303222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SGEKISSWQ_	AFP|p.N348Ifs*22|1|0.38|ENSG00000081051|chr4:73447655-73447655|A/-|frameshift_variant	12.206681093483082	0.6112419832031292	5				NaN	NaN	0	NaN	665	2761	3422
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3429	15.359	NaN	2259.5	30	0	534.1	0.14	+			34444	RTVSDSIKK	9	55	517.3036438874259	NaN	0	517.3035888671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RTVSDSIKK_	ENSG00000137076|ENST00000314888|TLN1;nc|ENSG00000137076|Q9Y490-2|TLN1	51.19269402634007	0.19847346126499396	5				NaN	NaN	0	NaN	666	2761	3422
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3438	15.381	NaN	6019.9	30	0	1619.2	0.214	+			38588	SSFYNTKKK	9	63	551.7995382102796	1101.584523487359	2	551.7985229492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSFYNTKKK_	ENSG00000169692|ENST00000371696|AGPAT2;ENST00000472820.1_1_9:139568206-139571631:-|nuORF;nc|ENSG00000169692|O15120-2|AGPAT2	162.25246889848123	0.0040893836092247005	5				NaN	NaN	0	NaN	672	2764	3437
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3439	15.384	NaN	3211.3	30	0	908.29	0.106	+			31234	QHADEIYHQTA	11	58	656.798969234206	1311.5833855352118	2	656.79736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QHADEIYHQTA_	ENSG00000136925|ENST00000341170|TSTD2;ENST00000375165.5_1_9:100368507-100388213:-|nuORF	70.41160668669231	0.23230827815249774	5				NaN	NaN	0	NaN	673	2764	3437
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3440	15.386	NaN	5044	30	0	636.81	0.106	+			14176	GSQAGGSQTLK	11	65	517.2682016373797	1032.5218503415592	2	517.2676391601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GSQAGGSQTLK_	ENSG00000125354|ENST00000394610|SEPTIN6;ENST00000467310.1_1_X:118753883-118767379:-|nuORF;ENST00000481072.1_1_X:118763279-118767388:-|nuORF;nc|ENSG00000125354|Q14141-4|SEPTIN6;nc|ENSG00000125354|Q14141|SEPTIN6	110.54063921016906	0.03889583772253614	5				NaN	NaN	0	NaN	674	2764	3437
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3441	15.388	NaN	829.87	30	0	83.481	0.106	+			19828	KEDREKEQL	9	38	587.8071899414062	NaN	0	587.8071899414062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEDREKEQL_	ENSG00000178913|ENST00000313368|TAF7	38.753607047826485	0.28190821760017076	5				NaN	NaN	0	NaN	675	2764	3437
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3442	15.39	NaN	4814.2	30	0	709.39	0.106	+			20998	KKGMIKSSR	9	60	525.8074000390735	1049.600247144947	2	525.8073120117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_KKGM(Oxidation (M))IKSSR_	ENSG00000171049|ENST00000340023|FPR2;FPR2|p.K276Nfs*40|1|0.04|ENSG00000171049|chr19:51769485-51769486|-/CAATG|frameshift_variant	49.44154591367651	0.3095138337212152	5				NaN	NaN	0	NaN	676	2764	3437
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3443	15.392	NaN	705.19	30	0	60.984	0.035	+			25299	LPAFAGHLR	9	44	491.28433564738424	980.5541183615685	2	491.2839660644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LPAFAGHLR_	ENST00000500698.1_1_11:9778373-9781063:-|nuORF	26.79610172149135	0.5528238334041078	5				NaN	NaN	0	NaN	677	2764	3437
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3455	15.417	NaN	18807	30	0	6768.2	0.214			+	7089	CVRCKFAKE	9	54	361.85313037586025	1082.5375617277807	3	361.8524169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CVRCKFAKE_	REV__ENSG00000185219|ENST00000396077|ZNF445;REV__ZNF445|p.K976Sfs*50|1|0.19|ENSG00000185219|chr3:44446744-44446744|T/-|frameshift_variant	30.317721548370564	0.5199124245378496	5				NaN	NaN	0	NaN	686	2767	3454
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3456	15.421	NaN	2245.4	30	0	640.58	0.036				-1	HWQSMFQK	8	56	554.2553551563184	1106.4961573794367	2	554.2545776367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_HWQSM(Oxidation (M))FQK_	ENSG00000143375|ENST00000271636|CGN;nc|ENSG00000143375|Q9P2M7-2|CGN	35.61828744233558	0.6843154725607303	5				NaN	NaN	0	NaN	687	2767	3454
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3468	15.446	NaN	18670	30	0	3724.2	0.214				-1	 	0	80	471.27518014434565	940.5358073554913	2	471.2742004394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	696	2770	3467
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3469	15.45	NaN	1421.6	30	0	267.16	0.106			+	24542	LGLLQEWK	8	41	493.78635906156416	985.5581651899283	2	493.7850036621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LGLLQEWK_	REV__ENST00000265354.5_1_6:43148006-43148234:+|nuORF	27.882242232435846	0.7440473649773525	5				NaN	NaN	0	NaN	697	2770	3467
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3470	15.452	NaN	20442	30	0	4490.9	0.106	+			6241	AVSEGTKAVTK	11	79	545.8095647987828	1089.6045766643656	2	546.3114013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVSEGTKAVTK_	ENSG00000124635|ENST00000339812|H2BC11;ENSG00000146047|ENST00000274764|H2BC1;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000196890|ENST00000693095|H2BC26;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000369385.5_1_1:149814898-149814982:+|nuORF;ENST00000436555.1_1_1:228651916-228652012:-|nuORF;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;nc|ENSG00000203814|Q5QNW6-2|H2BC18;nc|ENSG00000285480|A0A2R8Y619|H2BK1	141.91077491472637	0.00035695405801307794	5				NaN	NaN	0	NaN	698	2770	3467
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3471	15.454	NaN	892.82	30	0	134.87	0.106			+	-1	IMIMPMLK	8	34	496.77178955078125	NaN	0	496.77178955078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_IM(Oxidation (M))IMPMLK_	REV__GFPT1|p.V607M|1|0.26|ENSG00000198380|chr2:69328345-69328345|C/T|missense_variant	37.028477286268924	1.7418937515398478	5				NaN	NaN	0	NaN	699	2770	3467
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3472	15.455	NaN	545.54	30	0	94.517	0.106				-1	LQKDKEAMAL	10	31	388.20818781369604	NaN	0	388.2080993652344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_LQKDKEAM(Oxidation (M))AL_	ENSG00000147912|ENST00000432825|FBXO10;FBXO10|p.G603Rfs*15|1|0.14|ENSG00000147912|chr9:37522949-37522950|-/C|frameshift_variant;FBXO10|p.N548Ifs*21|1|0.07|ENSG00000147912|chr9:37529187-37529187|T/-|frameshift_variant	16.006774744331256	0.4201028297492154	5				NaN	NaN	0	NaN	700	2770	3467
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3473	15.457	NaN	5615.4	30	0	736.09	0.106	+			50100	WGRGRLGAQ	9	61	500.77585023407306	999.5371475349461	2	501.27490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_WGRGRLGAQ_	ENST00000322652.9_1_17:30264237-30264510:+|nuORF	35.61828744233558	0.47037581924408073	5				NaN	NaN	0	NaN	701	2770	3467
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3474	15.459	NaN	1487.9	30	0	545.78	0.034			+	43810	TLNYDARL	8	27	483.2532335355107	NaN	0	483.25323486328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TLNYDARL_	REV__ENSG00000204394|ENST00000375663|VARS1	20.481830146152948	1.741893751539848	5				NaN	NaN	0	NaN	702	2770	3467
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3480	15.475	NaN	102680	30	0	72351	0.214				-1	 	0	73	364.2088977487841	1089.6048638465525	3	364.20819091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	705	2773	3479
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3481	15.479	NaN	10039	30	0	1648.3	0.106	+			21850	KRKAELEK	8	63	501.3095602942028	1000.6045676552056	2	501.30859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KRKAELEK_	tr|U7SLV8|U7SLV8_FUSNUAutotransporterdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01907PE=4SV=1	72.87924865735499	0.38290713436690915	5				NaN	NaN	0	NaN	706	2773	3479
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3482	15.481	NaN	3631.6	30	0	505.47	0.106	+			35974	SEGTKAVTK	9	57	460.7569615127323	919.4993700922646	2	460.7558898925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEGTKAVTK_	ENSG00000124635|ENST00000339812|H2BC11;ENSG00000146047|ENST00000274764|H2BC1;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000196890|ENST00000693095|H2BC26;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000369385.5_1_1:149814898-149814982:+|nuORF;ENST00000436555.1_1_1:228651916-228652012:-|nuORF;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;HIST1H2BD|p.Y122H|1|0.36|ENSG00000158373|chr6:26158533-26158533|T/C|missense_variant;nc|ENSG00000203814|Q5QNW6-2|H2BC18;nc|ENSG00000285480|A0A2R8Y619|H2BK1	148.6902309647307	0.00717441509122429	5				NaN	NaN	0	NaN	707	2773	3479
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3483	15.483	NaN	4275.7	30	0	1724.8	0.106	+			5643	AVDATLRKK	9	38	334.54190384640185	1000.6038821394056	3	334.5414733886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVDATLRKK_	ENSG00000131043|ENST00000320849|AAR2	39.252832667884924	0.4290233611298554	5				NaN	NaN	0	NaN	708	2773	3479
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3484	15.484	NaN	1173.5	30	0	336.77	0.106			+	30456	QAAFRAVHNV	10	46	556.8012056577033	1111.5878583822066	2	556.8006591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QAAFRAVHNV_	REV__ENSG00000140848|ENST00000290776|CPNE2;REV__nc|ENSG00000140848|Q96FN4-2|CPNE2	35.61828744233558	0.588957954432594	5				NaN	NaN	0	NaN	709	2773	3479
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3485	15.486	NaN	5219.6	30	0	1078	0.106			+	8628	EDDRWSYVSGR	11	70	685.3100768993249	1368.6056008654498	2	685.3085327148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EDDRWSYVSGR_	REV__ENSG00000109794|ENST00000706927|FAM149A;REV__ENST00000514829.5_1_4:187065816-187079198:+|nuORF;REV__ENST00000515078.5_1_4:187070333-187088439:+|nuORF;REV__FAM149A|p.L650Tfs*46|1|0.32|ENSG00000109794|chr4:186165369-186165370|-/C|frameshift_variant;REV__nc|ENSG00000109794|A5PLN7-4|FAM149A;REV__nc|ENSG00000109794|A5PLN7|FAM149A	61.691277971877994	0.30835813808799384	5				NaN	NaN	0	NaN	710	2773	3479
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3486	15.488	NaN	2304	30	0	1427.5	0.038				-1	RVLSMGHEDE	10	20	594.7691755229944	NaN	0	594.768798828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_RVLSM(Oxidation (M))GHEDE_	BOC|p.P383H|1|0.07|ENSG00000144857|chr3:113273255-113273255|C/A|missense_variant	19.1035232394073	0.4201028297492154	5				NaN	NaN	0	NaN	711	2773	3479
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3498	15.513	NaN	1594.7	30	0	243.05	0.214			+	36927	SIKRSRSR	8	48	495.29947577441493	NaN	0	495.2994384765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIKRSRSR_	REV__ENSG00000177992|ENST00000325643|SPATA31E1;REV__SPATA31E1|p.S1369Afs*4|1|0.12|ENSG00000177992|chr9:87888591-87888591|T/-|frameshift_variant;REV__SPATA31E1|p.S1369Kfs*11|1|0.12|ENSG00000177992|chr9:87888593-87888594|GC/-|frameshift_variant	56.72105179125745	1.7418937515398478	5				NaN	NaN	0	NaN	720	2776	3497
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3499	15.517	NaN	1541.2	30	0	217.44	0.106			+	-1	CSACLRCTV	9	54	535.2324994725731	1068.450446011946	2	536.8276977539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))SAC(Carbamidomethyl (C))LRCTV_	REV__ENST00000490198.5_1_14:105930451-105931126:+|nuORF	32.81241826257853	0.4965981579233955	5				NaN	NaN	0	NaN	721	2776	3497
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3500	15.519	NaN	1393.5	30	0	179.36	0.106	+			40158	STQQEKETIAK	11	59	631.8339617317467	1261.6533705302934	2	631.8317260742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STQQEKETIAK_	ENSG00000116459|ENST00000369722|ATP5PB	67.74936324283564	0.2545025576448278	5				NaN	NaN	0	NaN	722	2776	3497
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3501	15.521	NaN	1345.9	30	0	635.21	0.106				-1	VAVRPECR	8	28	329.5117492675781	NaN	0	329.5117492675781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_VAVRPEC(Carbamidomethyl (C))R_	ENST00000591380.1_1_19:37960280-37960391:+|nuORF	30.503639358989545	1.7418937515398478	5				NaN	NaN	0	NaN	723	2776	3497
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3502	15.523	NaN	958.54	30	0	247.34	0.106			+	8809	EELAMQLRL	9	35	551.7999267578125	NaN	0	551.7999267578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EELAMQLRL_	REV__ENSG00000072134|ENST00000314728|EPN2;REV__ENST00000495155.5_1_17:19186396-19216987:+|nuORF;REV__nc|ENSG00000072134|O95208-2|EPN2;REV__nc|ENSG00000072134|O95208-3|EPN2;REV__nc|ENSG00000072134|O95208-5|EPN2	35.61828744233558	0.29773779453147337	5				NaN	NaN	0	NaN	724	2776	3497
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3503	15.524	NaN	300.29	30	0	91.533	0.035				-1	TDCRSLVK	8	18	489.75518798828125	NaN	0	489.75518798828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_TDC(Carbamidomethyl (C))RSLVK_	ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;TRRAP-ASNS|1|fusion;TRRAP-ASNS|2|fusion;TRRAP|p.A1620Cfs*35|1|0.27|ENSG00000196367|chr7:98949499-98949500|-/G|frameshift_variant;TRRAP|p.I564Hfs*9|1|0.29|ENSG00000196367|chr7:98910389-98910390|-/G|frameshift_variant;TRRAP|p.K3443Sfs*19|1|0.28|ENSG00000196367|chr7:99004246-99004246|A/-|frameshift_variant;TRRAP|p.P1292Lfs*17|1|0.44|ENSG00000196367|chr7:98933258-98933258|C/-|frameshift_variant;TRRAP|p.P1360Afs*14|1|0.05|ENSG00000196367|chr7:98935641-98935642|-/GCAAATAA|frameshift_variant	21.9598887501803	1.7418937515398478	5				NaN	NaN	0	NaN	725	2776	3497
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3508	15.539	NaN	5945.8	30	0	830.75	0.214	+			50321	WTGSVYGDGQ	10	60	535.2324994725731	1068.450446011946	2	535.231201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WTGSVYGDGQ_	OTOR|p.A83T|1|0.28|ENSG00000125879|chr20:16748998-16748998|G/A|missense_variant	49.44154591367651	0.46214596422418036	5				NaN	NaN	0	NaN	727	2779	3507
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3509	15.543	NaN	3086.3	30	0	388.92	0.106	+			13743	GQCGNQIGAK	10	51	516.7494817056717	1031.4844104781432	2	516.7489013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GQC(Carbamidomethyl (C))GNQIGAK_	CON__ENSEMBL:ENSBTAP00000025008;ENSG00000101162|ENST00000217133|TUBB1;ENSG00000104833|ENST00000264071|TUBB4A;ENSG00000137267|ENST00000333628|TUBB2A;ENSG00000137285|ENST00000259818|TUBB2B;ENSG00000173213|ENST00000308911|TUBB8B;ENSG00000188229|ENST00000340384|TUBB4B;ENSG00000196230|ENST00000327892|TUBB;ENSG00000258947|ENST00000315491|TUBB3;ENSG00000261456|ENST00000568584|TUBB8;ENST00000489942.1_1_6:3155224-3157697:-|nuORF;ENST00000554116.5_1_16:89989809-89998148:+|nuORF;ENST00000554927.1_1_16:89989809-89999206:+|nuORF;ENST00000604929.1_1_9:140135770-140136775:+|nuORF;TUBB|p.G142Afs*23|1|0.35|ENSG00000196230|chr6:30723483-30723483|G/-|frameshift_variant;TUBB2B|p.D177Hfs*21|1|0.32|ENSG00000137285|chr6:3225559-3225560|TC/-|frameshift_variant;TUBB4A|p.G141Vfs*24|2|0.35|ENSG00000104833|chr19:6496077-6496077|C/-|frameshift_variant	110.11987700582712	0.04764356995208832	5				NaN	NaN	0	NaN	728	2779	3507
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3510	15.545	NaN	2459.5	30	0	686.67	0.106	+			18918	IVNASTTNK	9	48	474.2624652039432	946.5103774746864	2	474.2610168457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IVNASTTNK_	ENSG00000078269|ENST00000355585|SYNJ2;nc|ENSG00000078269|O15056-2|SYNJ2;nc|ENSG00000078269|O15056-3|SYNJ2;SYNJ2|p.L1226Tfs*32|1|0.22|ENSG00000078269|chr6:158093029-158093030|-/C|frameshift_variant;SYNJ2|p.P1225Hfs*19|1|0.23|ENSG00000078269|chr6:158093030-158093030|C/-|frameshift_variant	76.16968421966216	0.11411088698345859	5				NaN	NaN	0	NaN	729	2779	3507
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3511	15.547	NaN	1604.7	30	0	361.02	0.106	+			12137	GAHVGSVVPG	10	34	440.2387993710836	878.4630458089672	2	440.2372741699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GAHVGSVVPG_	ENSG00000215421|ENST00000299687|ZNF407;ENST00000579200.1_1_18:72775002-72776421:+|nuORF;ZNF407|p.G1946Afs*18|1|0.26|ENSG00000215421|chr18:75063553-75063553|G/-|frameshift_variant	40.5726180659479	0.5438686920517214	5				NaN	NaN	0	NaN	730	2779	3507
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3512	15.549	NaN	1223.6	30	0	652.32	0.106				-1	MRAPAQVR	8	28	493.76501033297245	985.5154677327449	2	493.76409912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))M(Oxidation (M))RAPAQVR_	nc|ENSG00000197251|Q6ZUF6|LINC00336	19.359975847455235	0.7988239741663654	5				NaN	NaN	0	NaN	731	2779	3507
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3513	15.55	NaN	1173.8	30	0	206.87	0.106	+			16335	HEKSCDVKM	9	38	567.25830078125	NaN	0	567.25830078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_HEKSC(Carbamidomethyl (C))DVKM_	ENSG00000130165|ENST00000252445|ELOF1	56.43379154798735	0.16452882468284893	5				NaN	NaN	0	NaN	732	2779	3507
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3514	15.552	NaN	1746.9	30	0	422.47	0.035	+			14514	GTDEHVVCK	9	49	522.743700840166	1043.4728487471318	2	522.7439575195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_GTDEHVVC(Carbamidomethyl (C))K_	nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM	113.41158876095287	0.025516849225023126	5				NaN	NaN	0	NaN	733	2779	3507
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3523	15.574	NaN	8077.9	30	0	5614.9	0.214				-1	 	0	30	413.22776748659817	824.4409820399964	2	413.226806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	739	2782	3522
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3524	15.578	NaN	4293.5	30	0	1639.9	0.106	+			5305	ATVKLEHAK	9	64	498.7967310264643	995.5789091197286	2	498.7954406738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATVKLEHAK_	ENSG00000118705|ENST00000237530|RPN2;nc|ENSG00000118705|P04844-2|RPN2	117.81106730687013	0.02252488733980868	5				NaN	NaN	0	NaN	740	2782	3522
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3525	15.58	NaN	2649.9	30	0	968.25	0.106			+	46981	VKMNAVALTNK	11	47	396.89795109705415	1187.6720238913624	3	396.8970947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VKMNAVALTNK_	REV__ENSG00000154783|ENST00000285046|FGD5;REV__FGD5|p.T1238Pfs*9|1|0.25|ENSG00000154783|chr3:14922447-14922447|C/-|frameshift_variant;REV__nc|ENSG00000154783|Q6ZNL6-2|FGD5	35.17822180527639	0.6208003396870814	5				NaN	NaN	0	NaN	741	2782	3522
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3526	15.582	NaN	3681.6	30	0	1498.1	0.106			+	45453	TWQPHTRRH	9	55	406.87949321602485	NaN	0	407.2139587402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TWQPHTRRH_	REV__ENST00000469678.1_1_3:53259917-53265542:-|nuORF	37.81151784470057	0.28666463014928195	5				NaN	NaN	0	NaN	742	2782	3522
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3527	15.583	NaN	1407.1	30	0	597.46	0.106				-1	HTPHCELVLL	10	41	609.8151879601618	NaN	0	609.8141479492188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_HTPHC(Carbamidomethyl (C))ELVLL_	ENSG00000188917|ENST00000372936|TRMT2B;nc|ENSG00000188917|Q96GJ1-3|TRMT2B	20.94693142431847	0.4201028297492154	5				NaN	NaN	0	NaN	743	2782	3522
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3528	15.585	NaN	596.66	30	0	100.41	0.034			+	21340	KLVRSKEL	8	40	486.8134073722983	NaN	0	486.8132019042969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KLVRSKEL_	REV__ENSG00000136286|ENST00000258787|MYO1G;REV__ENST00000480503.5_1_7:45014700-45018578:-|nuORF;REV__ENST00000483585.5_1_7:45011810-45018578:-|nuORF;REV__nc|ENSG00000136286|B0I1T2-2|MYO1G;REV__nc|ENSG00000136286|B0I1T2-3|MYO1G;REV__nc|ENSG00000136286|B0I1T2-4|MYO1G	39.252832667884924	1.7418937515398478	5				NaN	NaN	0	NaN	744	2782	3522
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3535	15.602	NaN	3608.9	30	0	498.59	0.145	+			39237	STAKHVFEK	9	54	349.5259955148704	NaN	0	349.5259704589844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STAKHVFEK_	ENSG00000184445|ENST00000333479|KNTC1;ENST00000436959.7_1_12:123087118-123101977:+|nuORF;KNTC1|p.K1646Nfs*2|2|0.35|ENSG00000184445|chr12:122603073-122603073|A/-|frameshift_variant;KNTC1|p.K1646Tfs*12|1|0.13|ENSG00000184445|chr12:122603073-122603074|AA/-|frameshift_variant;KNTC1|p.L1647Tfs*12|1|0.3|ENSG00000184445|chr12:122603072-122603073|-/A|frameshift_variant;nc|ENSG00000184445|P50748-2|KNTC1	62.107414245175825	0.1403307765918332	5				NaN	NaN	0	NaN	748	2785	3534
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3545	15.626	NaN	1600.2	30	0	321.39	0.214			+	-1	KDGRTCTK	8	53	483.245330693092	964.476108452984	2	483.2440490722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_KDGRTC(Carbamidomethyl (C))TK_	REV__CCBE1|p.E319Rfs*80|1|0.29|ENSG00000183287|chr18:59438143-59438143|C/-|frameshift_variant;REV__ENSG00000183287|ENST00000439986|CCBE1	60.11826168202944	0.5006107059937851	5				NaN	NaN	0	NaN	755	2788	3544
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3546	15.629	NaN	5889.3	30	0	1954.8	0.106	+			6469	AVYKTHVEK	9	47	358.8704769614152	1073.5896014844457	3	358.86962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVYKTHVEK_	ENSG00000196954|ENST00000444739|CASP4;ENST00000529565.1_1_11:104819221-104819389:-|nuORF;ENST00000534356.1_1_11:104817674-104819389:-|nuORF;nc|ENSG00000196954|P49662-2|CASP4	60.11826168202944	0.21262886028301267	5				NaN	NaN	0	NaN	756	2788	3544
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3547	15.631	NaN	1101.6	30	0	168.17	0.106			+	50136	WIPYFVLG	8	35	497.7748107910156	NaN	0	497.7748107910156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_WIPYFVLG_	REV__ENST00000541788.1_22:38616387-38617064:-|nuORF	24.504012794735996	1.7418937515398478	5				NaN	NaN	0	NaN	757	2788	3544
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3548	15.633	NaN	1191.6	30	0	253.99	0.037			+	22277	KTCLIVVEKK	10	41	580.855224609375	NaN	0	580.855224609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTCLIVVEKK_	REV__ENST00000533050.5_2_11:126081479-126104922:+|nuORF	27.047317107675042	0.41136583337917604	5				NaN	NaN	0	NaN	758	2788	3544
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3557	15.653	NaN	4541.1	30	0	1113.1	0.214			+	39675	STIGNTLFPN	10	70	532.2745389837189	1062.5345250342377	2	532.2738037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STIGNTLFPN_	REV__DAB2|p.F398Lfs*15|1|0.36|ENSG00000153071|chr5:39382765-39382765|A/-|frameshift_variant;REV__ENSG00000153071|ENST00000320816|DAB2;REV__nc|ENSG00000153071|P98082-3|DAB2	72.87924865735499	0.25379688738724415	5				NaN	NaN	0	NaN	764	2791	3556
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3558	15.657	NaN	1001.1	30	0	241.37	0.106				-1	 	0	44	379.7488988265121	757.4832447198243	2	379.74822998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	765	2791	3556
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3559	15.659	NaN	1622.4	30	0	451.13	0.106			+	33615	RLRSPCPQ	8	25	478.7591247558594	NaN	0	478.7591247558594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RLRSPCPQ_	REV__ENST00000375994.6_1_20:30408114-30409309:+|nuORF	15.641811463095205	1.7418937515398478	5				NaN	NaN	0	NaN	766	2791	3556
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3560	15.66	NaN	3019.5	30	0	402.37	0.034			+	29834	PKYVPVDK	8	52	473.2733685015994	944.5321840699988	2	473.2725524902344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PKYVPVDK_	REV__ENSG00000016391|ENST00000315251|CHDH	45.9519527083369	0.6193794311207887	5				NaN	NaN	0	NaN	767	2791	3556
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3565	15.676	NaN	1799.2	30	0	139.14	0.214	+			31889	QQEFLSMKK	9	59	569.7982579075646	1137.581962881929	2	569.7982788085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QQEFLSMKK_	ENST00000442354.1_1_9:44052481-44067763:-|nuORF	71.87747018426188	0.13267044672804276	5				NaN	NaN	0	NaN	769	2794	3564
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3566	15.679	NaN	1478.3	30	0	240.65	0.106	+			36958	SILSGLFPPSG	11	50	537.7952395226826	1073.575926112165	2	537.7943725585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SILSGLFPPSG_	ABCA7|p.G1573Afs*82|1|0.27|ENSG00000064687|chr19:1057033-1057033|G/-|frameshift_variant;ENSG00000064687|ENST00000263094|ABCA7;nc|ENSG00000064687|Q8IZY2-2|ABCA7	47.657333605630114	0.4531673460382624	5				NaN	NaN	0	NaN	770	2794	3564
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3567	15.681	NaN	1883.9	30	0	213.97	0.037				-1	ISMHPIIRK	9	46	576.8298730969948	1151.6451932607895	2	576.8289184570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))ISM(Oxidation (M))HPIIRK_	ENSG00000215343|ENST00000400085|ZNF705D;ENSG00000215356|ENST00000400120|ZNF705B;ENST00000525473.1_1_11:71518673-71529252:-|nuORF;nc|ENSG00000214534|A8MWA4|ZNF705EP	35.61828744233558	0.47037581924408073	5				NaN	NaN	0	NaN	771	2794	3564
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3575	15.699	NaN	2538.6	30	0	398.91	0.214	+			35498	SATSKTFEK	9	55	499.76278837646544	997.5110238197309	2	499.7615661621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SATSKTFEK_	ASH1L|p.H1793Ifs*7|1|0.13|ENSG00000116539|chr1:155438778-155438778|G/-|frameshift_variant;ASH1L|p.I970Lfs*9|1|0.2|ENSG00000116539|chr1:155479962-155479962|T/-|frameshift_variant;ASH1L|p.K1222Rfs*11|4|0.27|ENSG00000116539|chr1:155479205-155479205|T/-|frameshift_variant;ASH1L|p.K1533Sfs*17|1|0.25|ENSG00000116539|chr1:155478272-155478272|T/-|frameshift_variant;ASH1L|p.K2377Nfs*5|1|0.28|ENSG00000116539|chr1:155354570-155354570|T/-|frameshift_variant;ASH1L|p.N1822Tfs*2|1|0.33|ENSG00000116539|chr1:155438690-155438690|T/-|frameshift_variant;ASH1L|p.R712Efs*23|3|0.35|ENSG00000116539|chr1:155480736-155480736|T/-|frameshift_variant;ASH1L|p.S2309Ifs*11|1|0.64|ENSG00000116539|chr1:155357635-155357636|-/T|frameshift_variant;ENSG00000116539|ENST00000392403|ASH1L;nc|ENSG00000116539|Q9NR48|ASH1L	68.84614121027924	0.14577793175421136	5				NaN	NaN	0	NaN	776	2797	3574
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3576	15.703	NaN	3727.9	30	0	1042.5	0.034				-1	 	0	66	486.2995216924448	970.5844904516896	2	486.7992858886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	777	2797	3574
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3584	15.724	NaN	10408	30	0	5379.9	0.214	+			24659	LGTWKRHA	8	47	323.5192515106525	967.5359251321576	3	323.5184631347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LGTWKRHA_	CCDC73|p.E448Kfs*5|1|0.13|ENSG00000186714|chr11:32615974-32615974|T/-|frameshift_variant;CCDC73|p.N638Ifs*18|1|0.36|ENSG00000186714|chr11:32614405-32614405|T/-|frameshift_variant;CCDC73|p.R1066Efs*13|1|0.08|ENSG00000186714|chr11:32602859-32602859|C/-|frameshift_variant;CCDC73|p.S466Kfs*5|1|0.27|ENSG00000186714|chr11:32614921-32614922|-/T|frameshift_variant;CCDC73|p.S672Vfs*22|1|0.26|ENSG00000186714|chr11:32614304-32614304|T/-|frameshift_variant;CCDC73|p.T895Lfs*8|1|0.13|ENSG00000186714|chr11:32613635-32613635|T/-|frameshift_variant;ENSG00000186714|ENST00000335185|CCDC73;nc|ENSG00000186714|Q6ZRK6-2|CCDC73	18.324413293986947	0.7971860551947066	5				NaN	NaN	0	NaN	782	2800	3583
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3585	15.727	NaN	2129.9	30	0	228.77	0.106			+	-1	RCLCMAGTAQ	10	57	535.2324994725731	1068.450446011946	2	535.2742309570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_RCLCM(Oxidation (M))AGTAQ_	REV__ENST00000571730.1_1_17:79670566-79671336:+|nuORF	36.446750945000026	0.5818864909973037	5				NaN	NaN	0	NaN	783	2800	3583
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3586	15.729	NaN	2087.5	30	0	347.83	0.106				-1	 	0	41	543.8554145472159	1085.6962761612317	2	543.8547973632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	784	2800	3583
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3587	15.731	NaN	3459.3	30	0	463.94	0.106				-1	EGCKAFFKR	9	61	571.7924378790067	1141.5703228248133	2	572.2930908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_EGC(Carbamidomethyl (C))KAFFKR_	ENSG00000091831|ENST00000206249|ESR1;ENSG00000140009|ENST00000341099|ESR2;ESR1-MTHFD1L|1|fusion;ESR1-MTHFD1L|2|fusion;nc|ENSG00000091831|P03372-2|ESR1;nc|ENSG00000091831|P03372-3|ESR1;nc|ENSG00000091831|P03372-4|ESR1;nc|ENSG00000140009|Q92731-2|ESR2;nc|ENSG00000140009|Q92731-3|ESR2;nc|ENSG00000140009|Q92731-4|ESR2;nc|ENSG00000140009|Q92731-5|ESR2;nc|ENSG00000140009|Q92731-6|ESR2;nc|ENSG00000140009|Q92731-7|ESR2;nc|ENSG00000140009|Q92731-8|ESR2;nc|ENSG00000140009|Q92731-9|ESR2	47.657333605630114	0.33044192980041115	5				NaN	NaN	0	NaN	785	2800	3583
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3588	15.733	NaN	1248.6	30	0	177.59	0.106			+	-1	ASIQKSSCM	9	42	506.2334732929148	1010.4523936526297	2	506.2321472167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_ASIQKSSC(Carbamidomethyl (C))M_	REV__ENST00000335154.9_1_12:50030400-50030613:-|nuORF	42.396135135203025	0.392153681582562	5				NaN	NaN	0	NaN	786	2800	3583
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3589	15.735	NaN	1235.2	30	0	269.59	0.032	+			29499	PDAAPVTK	8	37	399.72243919341605	797.4303254536321	2	399.7210388183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PDAAPVTK_	ENSG00000165138|ENST00000353234|ANKS6;nc|ENSG00000165138|Q68DC2-4|ANKS6	33.51558372728122	0.7005509609380386	5				NaN	NaN	0	NaN	787	2800	3583
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3598	15.754	NaN	1036.4	30	0	163.8	0.214	+			1052	AEKQTKEAL	9	38	509.2839830667002	1016.5534132002005	2	509.2830505371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEKQTKEAL_	ABCF1|p.P618Hfs*13|1|0.36|ENSG00000204574|chr6:30586268-30586268|C/-|frameshift_variant;ENSG00000204574|ENST00000326195|ABCF1;nc|ENSG00000204574|Q8NE71-2|ABCF1	45.97224482568171	0.3502073465782774	5				NaN	NaN	0	NaN	793	2803	3597
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3599	15.758	NaN	413.1	30	0	86.351	0.106				-1	 	0	25	327.18509656440636	652.3556401956128	2	327.1845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	794	2803	3597
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3600	15.76	NaN	3089.4	30	0	1186.7	0.106			+	37737	SLTLRLKQK	9	42	362.9057479354313	1085.695414406494	3	362.90460205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLTLRLKQK_	REV__ENST00000491615.5_1_13:51102044-51102324:+|nuORF	60.11826168202944	0.21262886028301267	5				NaN	NaN	0	NaN	795	2803	3597
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3601	15.762	NaN	748.1	30	0	147.45	0.034			+	13561	GLSTDKQIG	9	26	459.7493166657689	917.4840803983378	2	459.7478332519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GLSTDKQIG_	REV__ENST00000466125.1_1_17:61932188-61934782:+|nuORF;REV__ENST00000469014.1_1_17:61926730-61934782:+|nuORF;REV__ENST00000482005.5_1_17:61932137-61934782:+|nuORF	35.61828744233558	0.47037581924408073	5				NaN	NaN	0	NaN	796	2803	3597
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3608	15.778	NaN	1142.6	30	0	325.48	0.214	+			151	AAIDKMTKK	9	42	503.29241664496334	1004.5702803567267	2	503.2915954589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAIDKMTKK_	ENSG00000132394|ENST00000254730|EEFSEC;ENST00000484438.1_1_3:127872521-128060079:+|nuORF;nc|ENSG00000132394|P57772-2|EEFSEC	44.377184641726394	0.36891676396732553	5				NaN	NaN	0	NaN	800	2806	3607
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3609	15.782	NaN	1067.3	30	0	366.49	0.106				-1	STRCGWLL	8	27	496.75347900390625	NaN	0	496.75347900390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_STRC(Carbamidomethyl (C))GWLL_	ENST00000299824.5_1_20:37529267-37531364:+|nuORF	12.206847966760668	1.7418937515398478	5				NaN	NaN	0	NaN	801	2806	3607
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3610	15.783	NaN	1033.9	30	0	213.83	0.036	+			16297	HEHGQLHSM	9	43	538.2417602539062	NaN	0	538.2417602539062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HEHGQLHSM_	ENSG00000196504|ENST00000545856|PRPF40A;nc|ENSG00000196504|O75400-2|PRPF40A;nc|ENSG00000196504|O75400-3|PRPF40A;nc|ENSG00000196504|O75400|PRPF40A	52.936696900407355	0.1864545979552969	5				NaN	NaN	0	NaN	802	2806	3607
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3615	15.799	NaN	2324.3	30	0	253.12	0.214	+			46307	VEKETQEKM	9	60	561.2802942651232	1120.5460355970463	2	561.280029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VEKETQEKM_	ENSG00000136888|ENST00000374050|ATP6V1G1	94.4091291819064	0.0524345700464502	5				NaN	NaN	0	NaN	804	2809	3614
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3616	15.802	NaN	1630.6	30	0	307.19	0.106	+			3141	ASHTGSSL	8	40	380.18606815243345	758.3575833716669	2	380.1853942871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASHTGSSL_	ENSG00000168062|ENST00000301887|BATF2;nc|ENSG00000168062|Q8N1L9-2|BATF2	82.30502934623384	0.30436709589983096	5				NaN	NaN	0	NaN	805	2809	3614
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3617	15.804	NaN	1318.5	30	0	318.48	0.036	+			31249	QHKLVLLQQ	9	48	553.8391854390051	1105.66381794481	2	553.8397216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QHKLVLLQQ_	ENSG00000178104|ENST00000695795|PDE4DIP;ENST00000479369.6_1_1:144863291-144863441:-|nuORF;nc|ENSG00000178104|Q5VU43-3|PDE4DIP;nc|ENSG00000178104|Q5VU43-4|PDE4DIP;nc|ENSG00000178104|Q5VU43|PDE4DIP	45.97224482568171	0.3502073465782774	5				NaN	NaN	0	NaN	806	2809	3614
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3622	15.819	NaN	1543.6	30	0	370.18	0.211				-1	FCPVLKCHCFS	11	34	670.8023749806371	1339.590197028074	2	670.801513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_FC(Carbamidomethyl (C))PVLKCHCFS_	ENST00000544032.5_1_12:12974839-12974917:+|nuORF	19.1035232394073	0.7810393085260824	5				NaN	NaN	0	NaN	808	2812	3621
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3623	15.822	NaN	1621.3	30	0	136.1	0.106	+			11924	FVDPRELAAA	10	55	544.7884115168389	NaN	0	544.7882080078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FVDPRELAAA_	CPAMD8|p.M1571Cfs*32|1|0.32|ENSG00000160111|chr19:16902765-16902765|G/-|frameshift_variant;ENSG00000160111|ENST00000443236|CPAMD8;nc|ENSG00000160111|Q8IZJ3-2|CPAMD8	22.579656572578934	0.4201028297492154	5				NaN	NaN	0	NaN	809	2812	3621
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3624	15.824	NaN	1023.4	30	0	201.98	0.034	+			5593	AVATNQPPK	9	37	463.2594420559323	924.5043311786646	2	463.2580871582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVATNQPPK_	ENSG00000050820|ENST00000162330|BCAR1;ENST00000566982.1_1_16:75263411-75272069:-|nuORF;nc|ENSG00000050820|P56945-2|BCAR1;nc|ENSG00000050820|P56945-3|BCAR1;nc|ENSG00000050820|P56945-4|BCAR1;nc|ENSG00000050820|P56945-5|BCAR1;nc|ENSG00000050820|P56945-6|BCAR1;nc|ENSG00000050820|P56945-7|BCAR1;nc|ENSG00000050820|P56945-8|BCAR1	54.776311868738084	0.25715957988447635	5				NaN	NaN	0	NaN	810	2812	3621
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3632	15.844	NaN	17741	30	0	2553.8	0.214	+			20305	KEPYDLRV	8	72	510.27880671358247	1018.543060493965	2	510.2777404785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEPYDLRV_	ENST00000555098.5_1_14:23468454-23479348:-|nuORF;ENST00000556419.5_1_14:23468454-23479348:-|nuORF	69.6276240434122	0.4100012001731381	5				NaN	NaN	0	NaN	815	2815	3631
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3633	15.848	NaN	5743.9	30	0	1902.4	0.106	+			9450	EKLRKRTE	8	47	353.8803484054451	NaN	0	353.8804016113281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EKLRKRTE_	ENSG00000108848|ENST00000505658|LUC7L3;ENST00000508482.5_1_17:48797176-48828101:+|nuORF;LUC7L3|p.S389Kfs*2|3|0.28|ENSG00000108848|chr17:50750520-50750521|-/A|frameshift_variant;LUC7L3|p.S389Kfs*4|1|0.13|ENSG00000108848|chr17:50750520-50750521|-/AA|frameshift_variant;LUC7L3|p.S389Vfs*3|1|0.27|ENSG00000108848|chr17:50750521-50750521|A/-|frameshift_variant	31.954861631926434	1.7418937515398478	5				NaN	NaN	0	NaN	816	2815	3631
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3634	15.85	NaN	1649.6	30	0	260.4	0.106			+	48681	VTTETITVTL	10	47	539.302533468815	NaN	0	539.3026123046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTTETITVTL_	REV__ENSG00000189339|ENST00000617444|SLC35E2B;REV__ENST00000481276.1_1_1:1602946-1608282:-|nuORF;REV__nc|ENSG00000215790|P0CK97-2|SLC35E2A;REV__nc|ENSG00000215790|P0CK97|SLC35E2A	44.116797842482775	0.3427969396372342	5				NaN	NaN	0	NaN	817	2815	3631
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3635	15.852	NaN	2223.2	30	0	309.2	0.106				-1	 	0	55	501.30453377761484	1000.5945146220297	2	501.3031311035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	818	2815	3631
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3636	15.853	NaN	1060.6	30	0	279.3	0.106			+	43995	TPHFTAVLV	9	39	492.7772521972656	NaN	0	492.7772521972656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TPHFTAVLV_	REV__EML2|p.G237Afs*3|1|0.47|ENSG00000125746|chr19:45626736-45626736|C/-|frameshift_variant;REV__EML2|p.N274Tfs*120|1|0.24|ENSG00000125746|chr19:45624741-45624741|C/-|frameshift_variant;REV__ENSG00000125746|ENST00000245925|EML2;REV__ENST00000588000.5_1_19:46124203-46142634:-|nuORF;REV__nc|ENSG00000125746|O95834-2|EML2;REV__nc|ENSG00000125746|O95834-3|EML2	29.14955571784316	0.3303970763161698	5				NaN	NaN	0	NaN	819	2815	3631
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3637	15.855	NaN	1240.3	30	0	289.43	0.035	+			42018	SVYSPVKKK	9	48	518.3132934570312	NaN	0	518.3132934570312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVYSPVKKK_	ENSG00000136243|ENST00000258742|NUP42;ENST00000487595.1_7:23221671-23236000:+|nuORF;ENST00000497500.1_7:23221671-23226770:+|nuORF;nc|ENSG00000136243|O15504-2|NUP42	62.107414245175825	0.1403307765918332	5				NaN	NaN	0	NaN	820	2815	3631
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3645	15.873	NaN	1788.5	30	0	641.24	0.214				-1	KLCRLLKE	8	35	530.3177813205707	NaN	0	530.3179321289062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_KLC(Carbamidomethyl (C))RLLKE_	ENSG00000161652|ENST00000293405|IZUMO2	31.954861631926434	1.7418937515398478	5				NaN	NaN	0	NaN	825	2818	3644
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3646	15.877	NaN	1327.3	30	0	129.14	0.106	+			20053	KEKEAENERL	10	54	623.3273136703654	1244.6400744075306	2	623.3256225585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEKEAENERL_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	60.1669710687717	0.3643216362415131	5				NaN	NaN	0	NaN	826	2818	3644
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3647	15.879	NaN	1545.7	30	0	263.57	0.106				-1	VVDQYMNEGD	10	49	593.2400296396451	1184.46550634609	2	593.2388916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_VVDQYM(Oxidation (M))NEGD_	ENSG00000019485|ENST00000683152|PRDM11	37.81151784470057	0.569310847604193	5				NaN	NaN	0	NaN	827	2818	3644
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3648	15.881	NaN	1541.8	30	0	294.42	0.106	+			20317	KEQEQAQKL	9	58	551.3007846277957	1100.5870163223913	2	551.2994384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEQEQAQKL_	ENSG00000136021|ENST00000360820|SCYL2	109.47833844074708	0.029530294723441826	5				NaN	NaN	0	NaN	828	2818	3644
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3649	15.883	NaN	1068.5	30	0	230.48	0.035			+	15945	HAFPLADDR	9	43	521.2608879489164	NaN	0	521.2603759765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HAFPLADDR_	REV__ENSG00000010256|ENST00000203407|UQCRC1;REV__ENST00000415995.5_1_3:48636563-48647036:-|nuORF	35.61828744233558	0.29773779453147337	5				NaN	NaN	0	NaN	829	2818	3644
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3655	15.897	NaN	2880.2	30	0	302.87	0.144	+			26530	LTQQEKKCL	9	61	545.8009754796354	1089.5873980260708	2	546.3018188476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LTQQEKKCL_	ENST00000447944.6_1_2:55906852-55906897:-|nuORF	72.87924865735499	0.12833875048249987	5				NaN	NaN	0	NaN	832	2821	3654
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3665	15.921	NaN	2052.6	30	0	1489.4	0.214				-1	 	0	16	413.22776748659817	824.4409820399964	2	413.22711181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	839	2824	3664
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3666	15.925	NaN	1247.3	30	0	156.2	0.106				-1	KMRQMWNNK	9	56	626.3093762595998	1250.6041995859996	2	626.3082885742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_KMRQM(Oxidation (M))WNNK_	ADAMTSL3|p.F1172Yfs*20|1|0.12|ENSG00000156218|chr15:83983142-83983143|-/A|frameshift_variant;ADAMTSL3|p.H1300Ifs*18|1|0.33|ENSG00000156218|chr15:83991138-83991138|C/-|frameshift_variant;ADAMTSL3|p.N1166Kfs*26|1|0.4|ENSG00000156218|chr15:83983119-83983120|-/A|frameshift_variant;ADAMTSL3|p.R1207Gfs*32|1|0.3|ENSG00000156218|chr15:83983243-83983243|A/-|frameshift_variant;ENSG00000156218|ENST00000286744|ADAMTSL3;ENST00000561483.5_1_15:84323016-84694242:+|nuORF;nc|ENSG00000156218|P82987-2|ADAMTSL3	45.9519527083369	0.35044536499095585	5				NaN	NaN	0	NaN	840	2824	3664
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3667	15.927	NaN	3301.7	30	0	1040	0.106			+	-1	MMTLRGSR	8	51	492.2417005215657	982.4688481099314	2	492.2403869628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Oxidation (M)	_M(Oxidation (M))M(Oxidation (M))TLRGSR_	REV__ENST00000495461.5_1_3:53919491-53919584:-|nuORF	37.15910966729921	0.6739408393984688	5				NaN	NaN	0	NaN	841	2824	3664
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3668	15.928	NaN	737.78	30	0	77.703	0.034	+			16303	HEHPVNKI	8	42	487.26458740234375	NaN	0	487.26458740234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HEHPVNKI_	DAB2|p.F398Lfs*15|1|0.36|ENSG00000153071|chr5:39382765-39382765|A/-|frameshift_variant;ENSG00000153071|ENST00000320816|DAB2;nc|ENSG00000153071|P98082-2|DAB2;nc|ENSG00000153071|P98082-3|DAB2	54.776311868738084	1.7418937515398478	5				NaN	NaN	0	NaN	842	2824	3664
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3677	15.949	NaN	2721.7	30	0	419.76	0.212	+			24791	LIHYTVSLLKK	11	75	657.9114209791261	1313.808289025052	2	657.9095458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LIHYTVSLLKK_	tr|U7SRG0|U7SRG0_FUSNUMobA-likeNTPtransferasedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01649PE=4SV=1	68.62578634547417	0.24719609611953774	5				NaN	NaN	0	NaN	848	2827	3676
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3678	15.952	NaN	1457.8	30	0	433.23	0.106	+			15301	GTVDKKMVEK	10	48	567.8138939018498	NaN	0	567.814208984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTVDKKMVEK_	CBL|p.L272*|1|0.25|ENSG00000110395|chr11:119274894-119274894|T/-|frameshift_variant;CBL|p.V581Cfs*4|1|0.08|ENSG00000110395|chr11:119285359-119285360|-/C|frameshift_variant;ENSG00000110395|ENST00000264033|CBL	83.6470233535746	0.08151478778011129	5				NaN	NaN	0	NaN	849	2827	3676
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3679	15.954	NaN	1217.3	30	0	486.58	0.035	+			34256	RTGWSSRW	8	40	518.2582844974784	1034.5020160617566	2	518.2577514648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RTGWSSRW_	ENST00000565263.5_1_16:68087487-68090268:+|nuORF	34.172542307311794	0.6954784234644539	5				NaN	NaN	0	NaN	850	2827	3676
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3688	15.974	NaN	2327.7	30	0	368.5	0.213	+			19200	IYVSEKGTGQQ	11	56	605.3082077601711	1208.601862587142	2	605.3073120117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IYVSEKGTGQQ_	ENST00000439124.1_1_6:64325734-64326112:-|nuORF	42.86426827375447	0.5187511139693657	5				NaN	NaN	0	NaN	856	2830	3687
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3689	15.978	NaN	2549.7	30	0	729.67	0.106			+	27127	MAQYQEVNS	9	53	535.2328658494404	1068.4511787656807	2	535.2322387695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MAQYQEVNS_	REV__ENSG00000047410|ENST00000367478|TPR;REV__TPR|p.E1141Dfs*29|1|0.08|ENSG00000047410|chr1:186344085-186344086|-/CAGGTAAA|frameshift_variant;REV__TPR|p.P2083Qfs*3|1|0.31|ENSG00000047410|chr1:186323735-186323735|G/-|frameshift_variant;REV__TPR|p.T2133Lfs*63|1|0.03|ENSG00000047410|chr1:186322382-186322383|-/GTACTAATAAG|frameshift_variant;REV__TPR|p.V1142Efs*26|1|0.08|ENSG00000047410|chr1:186344083-186344084|-/TT|frameshift_variant	62.107414245175825	0.1960472003779324	5				NaN	NaN	0	NaN	857	2830	3687
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3690	15.98	NaN	1314.6	30	0	113.27	0.033			+	47381	VPIFVAPK	8	50	435.77536236945514	869.5361718057103	2	436.276123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VPIFVAPK_	REV__DHX37|p.A231S|1|0.13|ENSG00000150990|chr12:124980537-124980537|C/A|missense_variant;REV__ENSG00000150990|ENST00000308736|DHX37	37.028477286268924	0.6747514403204248	5				NaN	NaN	0	NaN	858	2830	3687
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3698	15.998	NaN	1810	30	0	161.37	0.214	+			31945	QQQQKSIAL	9	59	522.2964382780729	NaN	0	522.2969360351562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QQQQKSIAL_	BHLHE40|p.I118S|1|0.25|ENSG00000134107|chr3:4981486-4981486|T/G|missense_variant	75.04331003522576	0.0883683072398826	5				NaN	NaN	0	NaN	863	2833	3697
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3699	16.002	NaN	2610.9	30	0	325.95	0.106			+	-1	SIIGCRSR	8	61	474.75419671773864	947.4938405022773	2	474.753662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SIIGC(Carbamidomethyl (C))RSR_	REV__ENST00000513200.7_2_5:93800676-93805709:-|nuORF	57.81127852772723	0.5234495074909924	5				NaN	NaN	0	NaN	864	2833	3697
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3700	16.004	NaN	2636.8	30	0	1438	0.106			+	-1	RVVRVKVSC	9	40	551.8311762093738	1101.6477994855475	2	551.830322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_RVVRVKVSC(Carbamidomethyl (C))_	REV__ENST00000492143.5_1_7:148514900-148516105:-|nuORF;REV__ENST00000498186.5_1_7:148514900-148581332:-|nuORF	23.04248740728303	0.5879033540491928	5				NaN	NaN	0	NaN	865	2833	3697
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3701	16.006	NaN	1219.7	30	0	118.53	0.034	+			10850	FATARTPDP	9	43	488.2475195065749	NaN	0	488.2478942871094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FATARTPDP_	ENST00000594943.1_1_19:58038790-58063865:+|nuORF	29.170058357718403	0.3302935627494407	5				NaN	NaN	0	NaN	866	2833	3697
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3714	16.033	NaN	2968.7	30	0	539.11	0.214	+			18001	IIAKVTAKK	9	52	486.3340759277344	NaN	0	486.3340759277344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IIAKVTAKK_	ENSG00000155008|ENST00000373173|APOOL	112.41091882917199	0.007519870935348052	5				NaN	NaN	0	NaN	876	2836	3713
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3715	16.036	NaN	2283	30	0	633.3	0.106	+			20892	KIQLYVPQ	8	62	494.79290771484375	NaN	0	494.79290771484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KIQLYVPQ_	TIAM1|p.M817I|1|0.38|ENSG00000156299|chr21:31202950-31202950|C/T|missense_variant	73.97473282117947	1.7418937515398478	5				NaN	NaN	0	NaN	877	2836	3713
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3716	16.038	NaN	2939.1	30	0	871.29	0.106			+	4933	ATQPGQPPSAG	11	52	505.7487303343356	NaN	0	505.7485656738281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATQPGQPPSAG_	REV__ENST00000467438.1_1_1:87597663-87598596:+|nuORF	54.722347961057174	0.2814010645723107	5				NaN	NaN	0	NaN	878	2836	3713
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3717	16.04	NaN	7056.6	30	0	1277.5	0.106	+			48876	VVDAKTLKK	9	65	501.32239704730966	1000.6302411614193	2	501.3212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVDAKTLKK_	ENSG00000079246|ENST00000392132|XRCC5;ENST00000493706.1_1_2:216990646-216992426:+|nuORF;XRCC5|p.E287Kfs*11|2|0.25|ENSG00000079246|chr2:216127589-216127589|A/-|frameshift_variant;XRCC5|p.Q488Rfs*29|1|0.06|ENSG00000079246|chr2:216141305-216141305|C/-|frameshift_variant	88.17693792209575	0.07000514020414955	5				NaN	NaN	0	NaN	879	2836	3713
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3718	16.042	NaN	1311.4	30	0	438.82	0.106				-1	PCFEIWLM	8	28	556.25	NaN	0	556.25	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C),Oxidation (M)	_PC(Carbamidomethyl (C))FEIWLM(Oxidation (M))_	tr|U7SSH1|U7SSH1_FUSNURloB-likeproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01266PE=4SV=1	21.70233525837049	1.7418937515398478	5				NaN	NaN	0	NaN	880	2836	3713
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3719	16.044	NaN	1401	30	0	186.16	0.033	+			46000	VAVDRVLL	8	42	442.78309734746534	883.5516417617307	2	442.7816162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VAVDRVLL_	ENSG00000138658|ENST00000505019|ZGRF1;nc|ENSG00000138658|Q86YA3-7|ZGRF1;ZGRF1|p.E2096Rfs*4|1|0.33|ENSG00000138658|chr4:112539576-112539577|-/T|frameshift_variant;ZGRF1|p.R2022Kfs*8|1|0.29|ENSG00000138658|chr4:112539970-112539971|-/T|frameshift_variant	68.484700416344	0.4195245774506064	5				NaN	NaN	0	NaN	881	2836	3713
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3720	16.044	NaN	819.9	30	0	165.41	0.145			+	-1	YNRWGEVMHY	10	37	685.8028054054689	1369.5910578777377	2	685.8002319335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_YNRWGEVM(Oxidation (M))HY_	REV__ENST00000368324.4_1_1:155852837-155852948:+|nuORF	21.9598887501803	0.7004979571547932	5				NaN	NaN	0	NaN	882	2836	3713
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3734	16.076	NaN	6458.8	30	0	3836.5	0.214	+			30879	QEKEEQHQL	9	60	584.7858901310661	1167.5572273289322	2	584.7833862304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QEKEEQHQL_	ENSG00000107581|ENST00000369144|EIF3A;nc|ENSG00000107581|Q14152-2|EIF3A	109.43880257439609	0.029570636687953285	5				NaN	NaN	0	NaN	893	2839	3733
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3735	16.079	NaN	11661	30	0	7777.7	0.106			+	23116	KVVPFGLVGK	10	56	348.5580660394569	1042.6523687185706	3	348.55731201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVVPFGLVGK_	REV__ENSG00000143669|ENST00000389793|LYST	54.722347961057174	0.4138398245444204	5				NaN	NaN	0	NaN	894	2839	3733
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3736	16.081	NaN	2462.2	30	0	630.91	0.106	+			39633	STIDPSGTRSK	11	52	574.8004244073899	1147.5862958815796	2	574.7998657226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STIDPSGTRSK_	ENSG00000121931|ENST00000369763|LRIF1	102.04737869847887	0.056454446805991904	5				NaN	NaN	0	NaN	895	2839	3733
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3737	16.083	NaN	5683.6	30	0	1253.9	0.106	+			14164	GSNGTIIRK	9	64	473.27873860497476	944.5429242767495	2	473.2771301269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GSNGTIIRK_	ENSG00000117983|ENST00000529681|MUC5B;MUC5B|p.A1645Gfs*130|1|0.48|ENSG00000117983|chr11:1241806-1241807|-/C|frameshift_variant;MUC5B|p.E2447Vfs*233|1|0.15|ENSG00000117983|chr11:1244218-1244219|TG/-|frameshift_variant;MUC5B|p.E2929Gfs*98|1|0.13|ENSG00000117983|chr11:1245660-1245661|-/GC|frameshift_variant;MUC5B|p.P2717Qfs*3|2|0.21|ENSG00000117983|chr11:1245025-1245025|C/-|frameshift_variant;MUC5B|p.P3417Qfs*3|1|0.41|ENSG00000117983|chr11:1247125-1247125|C/-|frameshift_variant;MUC5B|p.S2205Qfs*54|1|0.2|ENSG00000117983|chr11:1243486-1243487|-/C|frameshift_variant;MUC5B|p.S3126Pfs*13|1|0.37|ENSG00000117983|chr11:1246251-1246251|C/-|frameshift_variant;MUC5B|p.S3878Pfs*27|1|0.13|ENSG00000117983|chr11:1248507-1248507|C/-|frameshift_variant;MUC5B|p.S4017Lfs*56|1|0.22|ENSG00000117983|chr11:1248928-1248929|-/C|frameshift_variant;MUC5B|p.T4706Pfs*4|2|0.37|ENSG00000117983|chr11:1250996-1250996|A/-|frameshift_variant	56.43379154798735	0.2433427591689151	5				NaN	NaN	0	NaN	896	2839	3733
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3738	16.085	NaN	3614	30	0	1554.3	0.106			+	538	ADAWPVPEVQG	11	38	390.19217759952653	1167.5547033987796	3	390.19122314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ADAWPVPEVQG_	REV__ENSG00000167522|ENST00000301030|ANKRD11;REV__ENST00000330736.9_1_16:89334888-89371640:-|nuORF	29.550750289552195	0.6798279264880025	5				NaN	NaN	0	NaN	897	2839	3733
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3739	16.087	NaN	830.46	30	0	265.23	0.106				-1	RMGAKGLQLE	10	36	559.8028858813502	NaN	0	559.80322265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_RM(Oxidation (M))GAKGLQLE_	ENSG00000204536|ENST00000396268|CCHCR1;ENST00000509552.5_1_6:31112443-31124902:-|nuORF;nc|ENSG00000204536|Q8TD31-3|CCHCR1;nc|ENSG00000204536|Q8TD31|CCHCR1	29.14955571784316	0.4044631218331212	5				NaN	NaN	0	NaN	898	2839	3733
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3740	16.089	NaN	1287.2	30	0	257.69	0.035				-1	AKKMVLALL	9	26	334.8846435546875	NaN	0	334.8846435546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_AKKM(Oxidation (M))VLALL_	ENSG00000132906|ENST00000333868|CASP9;nc|ENSG00000132906|P55211-4|CASP9	14.864876125193954	0.3866709117995958	5				NaN	NaN	0	NaN	899	2839	3733
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3747	16.105	NaN	3997.7	30	0	586.86	0.143	+			9132	EGLLQFTIL	9	60	517.2996982929528	1032.5848436527056	2	517.2989501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EGLLQFTIL_	ENSG00000082641|ENST00000362042|NFE2L1;nc|ENSG00000082641|Q14494-2|NFE2L1;NFE2L1|p.G370Afs*44|4|0.27|ENSG00000082641|chr17:48058426-48058426|G/-|frameshift_variant;NFE2L1|p.P162Qfs*6|2|0.24|ENSG00000082641|chr17:48051597-48051597|C/-|frameshift_variant	62.107414245175825	0.1960472003779324	5				NaN	NaN	0	NaN	903	2842	3746
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3757	16.129	NaN	8329.6	30	0	1568.9	0.214	+			18444	ISDEFLVQF	9	76	549.2785695418999	1096.5425861505996	2	549.2783813476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ISDEFLVQF_	ENSG00000128641|ENST00000392318|MYO1B;nc|ENSG00000128641|O43795-2|MYO1B	94.00642277110589	0.05356993013874309	5				NaN	NaN	0	NaN	910	2845	3756
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3758	16.132	NaN	6143.6	30	0	1091	0.106	+			40492	STYGTHIHEK	10	72	586.7902148246832	1171.5658767161663	2	586.789306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STYGTHIHEK_	ENSG00000119203|ENST00000238112|CPSF3	123.20810148215591	0.02279876478776198	5				NaN	NaN	0	NaN	911	2845	3756
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3759	16.134	NaN	1806	30	0	343.82	0.106	+			20798	KIAKQIVQK	9	55	528.3515840123345	1054.6886150914688	2	528.35107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KIAKQIVQK_	ENSG00000184787|ENST00000345496|UBE2G2;ENST00000477954.5_1_21:46191294-46194726:-|nuORF;ENST00000481546.1_1_21:46191294-46193735:-|nuORF;ENST00000491513.5_1_21:46191294-46199096:-|nuORF;ENST00000497630.5_1_21:46191294-46221727:-|nuORF;nc|ENSG00000184787|P60604-2|UBE2G2	64.20726635412375	0.17854274437659667	5				NaN	NaN	0	NaN	912	2845	3756
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3760	16.136	NaN	657.59	30	0	230.12	0.037			+	37431	SLHAGLHRHI	10	29	570.8227599651253	NaN	0	570.823486328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLHAGLHRHI_	REV__ENSG00000133612|ENST00000397238|AGAP3;REV__ENST00000473633.1_1_7:150838782-150841027:+|nuORF;REV__nc|ENSG00000133612|Q96P47-2|AGAP3;REV__nc|ENSG00000133612|Q96P47-5|AGAP3;REV__nc|ENSG00000133612|Q96P47|AGAP3	27.882242232435846	0.4086243523356342	5				NaN	NaN	0	NaN	913	2845	3756
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3771	16.16	NaN	3200.6	30	0	465	0.214	+			4017	ATCSRVLNK	9	56	524.7828573912103	1047.5511618492205	2	524.7824096679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_ATC(Carbamidomethyl (C))SRVLNK_	ENSG00000176853|ENST00000334705|FAM91A1	88.17693792209575	0.07000514020414955	5				NaN	NaN	0	NaN	921	2848	3770
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3772	16.163	NaN	4255.9	30	0	395.49	0.106			+	9455	EKMPCTKKDP	10	72	588.791815997174	1175.569079061148	2	588.7908325195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EKMPCTKKDP_	REV__ENSG00000101346|ENST00000375749|POFUT1;REV__nc|ENSG00000101346|Q9H488-2|POFUT1	117.81106730687013	0.030421278947300796	5				NaN	NaN	0	NaN	922	2848	3770
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3773	16.165	NaN	5471.7	30	0	1917.5	0.106	+			37004	SIPSDVGIYF	10	41	366.520563731082	NaN	0	366.5205383300781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SIPSDVGIYF_	nc|ENSG00000211814|P0DPF4|TRAV35	45.9519527083369	0.331194823726099	5				NaN	NaN	0	NaN	923	2848	3770
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3774	16.167	NaN	2638.9	30	0	221.1	0.106			+	30726	QDKIHTLTR	9	57	556.315364916036	1110.6161768988718	2	556.3147583007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QDKIHTLTR_	REV__ENSG00000204516|ENST00000252229|MICB;REV__nc|ENSG00000204516|Q29980-2|MICB	58.22992032128504	0.22837015374068087	5				NaN	NaN	0	NaN	924	2848	3770
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3775	16.169	NaN	3032.9	30	0	1350.5	0.106			+	40058	STNNIIDKFP	10	34	383.53577067055903	1147.585482611877	3	383.53497314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STNNIIDKFP_	REV__ENSG00000140694|ENST00000437198|PARN;REV__ENST00000562715.1_1_16:14670117-14678644:-|nuORF;REV__nc|ENSG00000140694|O95453-2|PARN;REV__nc|ENSG00000140694|O95453-3|PARN;REV__nc|ENSG00000140694|O95453-4|PARN	32.75053402867276	0.6123771875927935	5				NaN	NaN	0	NaN	925	2848	3770
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3776	16.171	NaN	2024.6	30	0	322.81	0.106	+			6460	AVYGQKEIHRK	11	58	664.8768591749466	1327.7391654166931	2	664.8749389648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AVYGQKEIHRK_	ENSG00000145907|ENST00000356245|G3BP1;ENST00000413279.1_1_2:136269117-136269381:-|nuORF;ENST00000519832.1_1_5:151166169-151170647:+|nuORF;nc|ENSG00000145907|Q13283-2|G3BP1	39.873155843976775	0.5596786644756743	5				NaN	NaN	0	NaN	926	2848	3770
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3777	16.172	NaN	787.77	30	0	125.76	0.034			+	31783	QPKVPRSE	8	33	470.7635192871094	NaN	0	470.7635192871094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QPKVPRSE_	REV__ENST00000456324.5_1_19:36705694-36705913:+|nuORF	34.172542307311794	1.7418937515398478	5				NaN	NaN	0	NaN	927	2848	3770
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3791	16.201	NaN	11702	30	0	2919	0.214				-1	 	0	62	479.30942842082175	956.6043039084435	2	479.3080139160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	938	2851	3790
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3792	16.205	NaN	1789.4	30	0	388.45	0.106			+	-1	KYQYPNKP	8	50	540.2786254882812	NaN	0	540.2786254882812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))KYQYPNKP_	REV__CACNA1D|p.F1318Sfs*6|1|0.39|ENSG00000157388|chr3:53770457-53770457|T/-|frameshift_variant;REV__CACNA1D|p.N2051Tfs*16|1|0.26|ENSG00000157388|chr3:53810254-53810254|A/-|frameshift_variant;REV__CACNA1D|p.R1187I|1|0.11|ENSG00000157388|chr3:53751792-53751792|G/T|missense_variant;REV__ENSG00000157388|ENST00000350061|CACNA1D;REV__nc|ENSG00000157388|Q01668-2|CACNA1D;REV__nc|ENSG00000157388|Q01668-3|CACNA1D;REV__nc|ENSG00000157388|Q01668-4|CACNA1D	29.14955571784316	1.7418937515398478	5				NaN	NaN	0	NaN	939	2851	3790
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3793	16.207	NaN	953.48	30	0	128.25	0.106			+	51407	YTQELELKYL	10	30	650.3444564711903	NaN	0	650.3448486328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YTQELELKYL_	REV__ENSG00000176619|ENST00000325327|LMNB2;REV__LMNB2|p.S544Lfs*23|1|0.45|ENSG00000176619|chr19:2431863-2431864|-/G|frameshift_variant	14.864876125193954	0.4201028297492154	5				NaN	NaN	0	NaN	940	2851	3790
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3794	16.209	NaN	819.15	30	0	229.51	0.106	+			26217	LSSIRAVIK	9	25	493.8214111328125	NaN	0	493.8214111328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSSIRAVIK_	ENSG00000109686|ENST00000604030|SH3D19	19.1035232394073	0.3723251548669699	5				NaN	NaN	0	NaN	941	2851	3790
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3795	16.211	NaN	1118.5	30	0	126.71	0.037	+			40812	SVEDPTKQTK	10	42	566.7964402792508	1131.5783276253014	2	566.7960205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVEDPTKQTK_	ENSG00000173548|ENST00000308527|SNX33;SNX33|p.C435Afs*62|2|0.36|ENSG00000173548|chr15:75650395-75650395|C/-|frameshift_variant;SNX33|p.G409Afs*88|1|0.33|ENSG00000173548|chr15:75650323-75650323|G/-|frameshift_variant	36.31764250033197	0.5830761606467809	5				NaN	NaN	0	NaN	942	2851	3790
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3806	16.234	NaN	9631.4	30	0	2835.3	0.214			+	15126	GTRKWRKPAS	10	46	396.23192167885134	1185.673935636754	3	396.2309875488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTRKWRKPAS_	REV__ENST00000248600.5_1_7:75677146-75677221:-|nuORF	41.42661286455405	0.5359995577334734	5				NaN	NaN	0	NaN	950	2854	3805
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3807	16.238	NaN	4563.7	30	0	2330.8	0.106	+			32448	QVITETAKK	9	51	509.30146231309476	1016.5883716929895	2	509.3005676269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QVITETAKK_	ENSG00000120675|ENST00000379221|DNAJC15;ENST00000474320.1_1_13:43597726-43652825:+|nuORF	39.252832667884924	0.4290233611298554	5				NaN	NaN	0	NaN	951	2854	3805
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3808	16.24	NaN	7596.2	30	0	1800.6	0.106	+			24972	LLCLKISDKQT	11	70	421.244179660432	1260.710709581496	3	421.242919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LLCLKISDKQT_	ENSG00000146350|ENST00000398212|TBC1D32;nc|ENSG00000146350|Q96NH3-4|TBC1D32;TBC1D32|p.F1022Sfs*5|1|0.3|ENSG00000146350|chr6:121113166-121113166|A/-|frameshift_variant;TBC1D32|p.L1005Ffs*9|1|0.37|ENSG00000146350|chr6:121115215-121115216|TT/-|frameshift_variant	34.172542307311794	0.6313490974540716	5				NaN	NaN	0	NaN	952	2854	3805
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3809	16.242	NaN	3415.4	30	0	631.47	0.106	+			10431	EVKISAKKDIM	11	54	631.362538661699	1260.7105243901979	2	631.3612060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EVKISAKKDIM_	CCDC168|p.G4714Rfs*2|1|0.22|ENSG00000175820|chr13:102736557-102736558|-/T|frameshift_variant;CCDC168|p.G6141Lfs*25|1|0.03|ENSG00000175820|chr13:102732276-102732277|-/AGGAAAAATCACCAAACACTAG|frameshift_variant;CCDC168|p.K5937Nfs*10|1|0.37|ENSG00000175820|chr13:102732886-102732886|T/-|frameshift_variant;CCDC168|p.K6236Nfs*3|1|0.42|ENSG00000175820|chr13:102731989-102731989|T/-|frameshift_variant;CCDC168|p.L5048Ifs*6|1|0.12|ENSG00000175820|chr13:102735555-102735556|-/T|frameshift_variant;CCDC168|p.L5234*|1|0.12|ENSG00000175820|chr13:102735001-102735001|A/-|frameshift_variant;CCDC168|p.M5025Cfs*8|1|0.29|ENSG00000175820|chr13:102735624-102735624|T/-|frameshift_variant;CCDC168|p.T4543Lfs*5|1|0.1|ENSG00000175820|chr13:102737070-102737070|T/-|frameshift_variant;ENSG00000175820|ENST00000322527|CCDC168	47.95952297671804	0.44903247279694136	5				NaN	NaN	0	NaN	953	2854	3805
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3810	16.243	NaN	678.02	30	0	125.27	0.106	+			31977	QRCECQRE	8	27	526.2247314453125	NaN	0	526.2247314453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QRCECQRE_	RIBC1|p.R233C|1|0.41|ENSG00000158423|chrX:53430429-53430429|C/T|missense_variant	14.864876125193954	1.7418937515398478	5				NaN	NaN	0	NaN	954	2854	3805
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3811	16.245	NaN	1021	30	0	157.29	0.035				-1	QQSCPGRR	8	32	494.7395982906752	NaN	0	494.7396545410156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_QQSC(Carbamidomethyl (C))PGRR_	ENST00000333486.3_1_3:49850715-49850936:-|nuORF	24.20275056022122	1.7418937515398478	5				NaN	NaN	0	NaN	955	2854	3805
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3812	16.246	NaN	1182.3	30	0	178.82	0.139	+			44332	TSGGGSIHVI	10	39	464.24737548828125	NaN	0	464.24737548828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TSGGGSIHVI_	ENSG00000177463|ENST00000425241|NR2C2;ENST00000475707.5_1_3:15045421-15079667:+|nuORF;nc|ENSG00000177463|P49116-2|NR2C2;NR2C2|p.F563Lfs*10|1|0.4|ENSG00000177463|chr3:15042899-15042899|T/-|frameshift_variant	27.882242232435846	0.4086243523356342	5				NaN	NaN	0	NaN	956	2854	3805
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3818	16.264	NaN	6645.6	30	0	1896.2	0.214	+			6375	AVTYTEHAK	9	66	510.2624971899895	1018.510441446779	2	510.26153564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVTYTEHAK_	ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2	69.6276240434122	0.14239879520340665	5				NaN	NaN	0	NaN	959	2857	3817
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3819	16.267	NaN	7675.3	30	0	1836.2	0.106			+	-1	VVDCGYQCNA	10	74	564.7283162270867	1127.4420795209733	2	564.7280883789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_VVDC(Carbamidomethyl (C))GYQCNA_	REV__ENSG00000168743|ENST00000379987|NPNT;REV__nc|ENSG00000168743|Q6UXI9-2|NPNT;REV__nc|ENSG00000168743|Q6UXI9-3|NPNT;REV__nc|ENSG00000168743|Q6UXI9-4|NPNT;REV__nc|ENSG00000168743|Q6UXI9-5|NPNT;REV__nc|ENSG00000168743|Q6UXI9-6|NPNT;REV__NPNT|p.R542Gfs*10|1|0.43|ENSG00000168743|chr4:105968911-105968911|A/-|frameshift_variant	47.657333605630114	0.47858658696240314	5				NaN	NaN	0	NaN	960	2857	3817
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3820	16.269	NaN	2944.5	30	0	430.55	0.106	+			36134	SEKRKQISV	9	48	537.8179664770822	1073.6213800209644	2	537.8173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEKRKQISV_	ENSG00000100994|ENST00000216962|PYGB;PYGB-C20orf152|1|fusion;PYGB-C20orf152|2|fusion;PYGB|p.T677Kfs*4|1|0.44|ENSG00000100994|chr20:25292466-25292466|C/-|frameshift_variant	65.15724298150197	0.17062369902793603	5				NaN	NaN	0	NaN	961	2857	3817
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3821	16.271	NaN	3341.4	30	0	648.2	0.106	+			49880	VYTKKTTKL	9	61	541.3355516398772	1080.6565503465542	2	541.3346557617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VYTKKTTKL_	ENSG00000148396|ENST00000684901|SEC16A;nc|ENSG00000148396|O15027-2|SEC16A;nc|ENSG00000148396|O15027-3|SEC16A;nc|ENSG00000148396|O15027-4|SEC16A;nc|ENSG00000148396|O15027-5|SEC16A;SEC16A|p.P2155Hfs*25|1|0.25|ENSG00000148396|chr9:136447664-136447664|G/-|frameshift_variant	63.42647028704847	0.1850514934184437	5				NaN	NaN	0	NaN	962	2857	3817
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3822	16.273	NaN	1295.4	30	0	598.53	0.106				-1	 	0	31	413.22776748659817	824.4409820399964	2	413.2270202636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	963	2857	3817
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3823	16.275	NaN	10658	30	0	3025	0.106	+			49030	VVHDCMYVM	9	53	376.821355616758	1127.442237450474	3	376.82061767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Oxidation (M)	_VVHDCM(Oxidation (M))YVM(Oxidation (M))_	KBTBD2|p.I431M|1|0.15|ENSG00000170852|chr7:32869924-32869924|A/C|missense_variant	42.396135135203025	0.392153681582562	5				NaN	NaN	0	NaN	964	2857	3817
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3824	16.277	NaN	2972.4	30	0	384.56	0.036	+			1479	AFLVRVPSSV	10	36	358.8810372525344	1073.6212823578032	3	358.8800048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AFLVRVPSSV_	ENSG00000042813|ENST00000046087|ZPBP;nc|ENSG00000042813|Q9BS86-2|ZPBP	36.446750945000026	0.5818864909973037	5				NaN	NaN	0	NaN	965	2857	3817
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3836	16.302	NaN	6211.6	30	0	640.43	0.215	+			2720	AQTGTRWNK	9	72	531.2789550097411	1060.5433570862822	2	531.2783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AQTGTRWNK_	ENSG00000198258|ENST00000586895|UBL5;ENST00000588141.1_1_19:9939136-9939570:+|nuORF;ENST00000588595.5_1_19:9939136-9939352:+|nuORF;ENST00000589372.1_1_19:9939013-9939570:+|nuORF	136.26810882979174	0.012230845423532208	5				NaN	NaN	0	NaN	974	2860	3835
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3837	16.306	NaN	2323.9	30	0	609.42	0.106	+			1455	AFCVGWSWSN	10	48	578.7481141644356	1155.4816753956711	2	578.7472534179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AFCVGWSWSN_	ENST00000377843.6_1_5:148930905-148930962:-|nuORF	39.252832667884924	0.5560298534376815	5				NaN	NaN	0	NaN	975	2860	3835
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3838	16.308	NaN	4073.8	30	0	558.92	0.106			+	-1	SLMPRQRR	8	48	353.86454980684556	NaN	0	353.86456298828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_SLM(Oxidation (M))PRQRR_	REV__ENST00000391998.3_1_19:53983175-53983226:+|nuORF	27.882242232435846	1.7418937515398478	5				NaN	NaN	0	NaN	976	2860	3835
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3839	16.309	NaN	1691.2	30	0	161.23	0.106			+	-1	VYGKSRMPK	9	46	361.1986421993917	NaN	0	361.22491455078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_VYGKSRM(Oxidation (M))PK_	REV__ENSG00000115665|ENST00000264047|SLC5A7	40.77816245573522	0.2702456086868081	5				NaN	NaN	0	NaN	977	2860	3835
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3840	16.311	NaN	1325.1	30	0	259.18	0.106			+	13486	GLLQKNKNK	9	46	521.822021484375	NaN	0	521.822021484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GLLQKNKNK_	REV__nc|ENSG00000137965|Q8TCB0-2|IFI44	52.936696900407355	0.1864545979552969	5				NaN	NaN	0	NaN	978	2860	3835
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3841	16.313	NaN	558.51	30	0	181.58	0.037			+	33509	RKNPKGFKE	9	20	368.5477294921875	NaN	0	368.5477294921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RKNPKGFKE_	REV__ENSG00000112273|ENST00000510882|HDGFL1;REV__ENSG00000143321|ENST00000357325|HDGF;REV__ENST00000465180.5_1_1:156713243-156725382:-|nuORF;REV__ENST00000469145.5_1_1:156714305-156721275:-|nuORF;REV__ENST00000482651.5_1_1:156713243-156717241:-|nuORF;REV__HDGFL1|p.R73C|1|0.15|ENSG00000112273|chr6:22569792-22569792|C/T|missense_variant;REV__nc|ENSG00000143321|P51858-2|HDGF;REV__nc|ENSG00000143321|P51858-3|HDGF	12.206681093483082	0.3956676078624892	5				NaN	NaN	0	NaN	979	2860	3835
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3842	16.314	NaN	1056.6	30	0	176.77	0.141	+			11321	FLAHEYPDL	9	41	552.7702359833238	1103.5259190334475	2	552.820068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FLAHEYPDL_	ABHD8|p.T259I|1|0.47|ENSG00000127220|chr19:17294831-17294831|G/A|missense_variant;ENSG00000127220|ENST00000247706|ABHD8	26.79610172149135	0.5528238334041078	5				NaN	NaN	0	NaN	980	2860	3835
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3855	16.343	NaN	11971	30	0	2224.6	0.214				-1	 	0	81	565.3391770087079	1128.6638010842157	2	565.3385009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	990	2863	3854
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3856	16.346	NaN	3990.3	30	0	590.28	0.106			+	8955	EFAVIKPVSP	10	71	543.8126685560902	1085.6107841789803	2	543.8118286132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EFAVIKPVSP_	REV__ALAS1|p.N540Tfs*8|1|0.15|ENSG00000023330|chr3:52212273-52212273|A/-|frameshift_variant;REV__ENSG00000023330|ENST00000484952|ALAS1	67.49366992349736	0.29779660154124327	5				NaN	NaN	0	NaN	991	2863	3854
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3857	16.348	NaN	6704.5	30	0	798.41	0.106			+	36471	SEVRAWRR	8	66	530.2946569203425	1058.574760907485	2	530.2939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEVRAWRR_	REV__ENST00000315872.10_1_2:11484324-11484654:-|nuORF	54.776311868738084	0.5534952410049249	5				NaN	NaN	0	NaN	992	2863	3854
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3858	16.35	NaN	9646	30	0	6110.6	0.106	+			128	AAGAELLQR	9	48	464.7644191300177	927.5142853268354	2	464.763916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AAGAELLQR_	ENST00000471864.1_1_9:38621862-38622117:+|nuORF;nc|ENSG00000204860|Q5SY85|FAM201A	30.503639358989545	0.5181749237905803	5				NaN	NaN	0	NaN	993	2863	3854
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3859	16.352	NaN	2014.7	30	0	169.38	0.106	+			23036	KVSYSHIQSK	10	68	588.8234994373352	1175.6324459414702	2	588.822509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KVSYSHIQSK_	ENSG00000047849|ENST00000683076|MAP4;nc|ENSG00000047849|P27816-2|MAP4;nc|ENSG00000047849|P27816-4|MAP4;nc|ENSG00000047849|P27816-6|MAP4;nc|ENSG00000047849|P27816|MAP4	70.41160668669231	0.27395730963879994	5				NaN	NaN	0	NaN	994	2863	3854
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3860	16.354	NaN	5021.2	30	0	958.73	0.035	+			341	AAQAHTREL	9	50	498.7645321512052	NaN	0	498.7645568847656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AAQAHTREL_	ENSG00000103549|ENST00000324685|RNF40;ENST00000493683.5_1_16:30773821-30780773:+|nuORF;nc|ENSG00000103549|O75150-3|RNF40;nc|ENSG00000103549|O75150-4|RNF40	80.45461616416974	0.0698259577396595	5				NaN	NaN	0	NaN	995	2863	3854
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3861	16.354	NaN	1822	30	0	273.05	0.139				-1	 	0	49	486.2627897458392	970.5110265584784	2	486.2612609863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	996	2863	3854
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3873	16.382	NaN	2038.6	30	0	361.17	0.214			+	46977	VKLGLYVLP	9	57	501.3214365701818	NaN	0	501.3212585449219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VKLGLYVLP_	REV__ENSG00000113231|ENST00000264917|PDE8B;REV__nc|ENSG00000284762|O95263-2|PDE8B;REV__nc|ENSG00000284762|O95263-3|PDE8B;REV__nc|ENSG00000284762|O95263-4|PDE8B;REV__nc|ENSG00000284762|O95263-5|PDE8B;REV__nc|ENSG00000284762|O95263-6|PDE8B	42.396135135203025	0.2590952873412954	5				NaN	NaN	0	NaN	1005	2866	3872
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3874	16.386	NaN	1026	30	0	97.915	0.106	+			42655	TAVKHEQEY	9	47	552.7702359833238	1103.5259190334475	2	552.769775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAVKHEQEY_	ENSG00000086598|ENST00000262225|TMED2	76.16968421966216	0.11411088698345859	5				NaN	NaN	0	NaN	1006	2866	3872
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3875	16.388	NaN	795.03	30	0	151.23	0.035	+			45465	TYAGGTASATK	11	29	514.2562032033757	NaN	0	514.2555541992188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TYAGGTASATK_	CAST|p.E474Kfs*10|1|0.39|ENSG00000153113|chr5:96754695-96754695|A/-|frameshift_variant;ENSG00000153113|ENST00000675179|CAST;ENST00000507487.5_1_5:95998126-96062463:+|nuORF;ENST00000515160.5_1_5:95998126-96031662:+|nuORF;nc|ENSG00000153113|P20810-10|CAST;nc|ENSG00000153113|P20810-5|CAST;nc|ENSG00000153113|P20810-7|CAST;nc|ENSG00000153113|P20810-9|CAST	25.125986553469783	0.45344013546260314	5				NaN	NaN	0	NaN	1007	2866	3872
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3884	16.409	NaN	5860.3	30	0	724.88	0.214	+			23012	KVSKELVEK	9	68	530.3250904563666	1058.6356279795332	2	530.3243408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVSKELVEK_	ENSG00000125844|ENST00000377813|RRBP1;nc|ENSG00000125844|Q9P2E9-3|RRBP1;RRBP1|p.A628Gfs*69|1|0.35|ENSG00000125844|chr20:17621915-17621916|-/T|frameshift_variant	82.83050618871818	0.08530945204495013	5				NaN	NaN	0	NaN	1013	2869	3883
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3885	16.413	NaN	4115.5	30	0	1021.1	0.106	+			36667	SGMGSTVSK	9	51	427.20868918249215	852.4028254317843	2	427.2074279785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SGMGSTVSK_	ENSG00000132383|ENST00000254719|RPA1;RPA1|p.N274Mfs*5|1|0.18|ENSG00000132383|chr17:1879272-1879272|A/-|frameshift_variant	91.26522074875469	0.06129826844580791	5				NaN	NaN	0	NaN	1014	2869	3883
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3886	16.415	NaN	4655.1	30	0	933.97	0.106				-1	 	0	53	459.7767174013921	917.5388818695842	2	459.77545166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1015	2869	3883
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3887	16.416	NaN	1275.4	30	0	249.56	0.106	+			32322	QTSIGYGVR	9	44	490.762553573113	979.510554213026	2	490.760986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QTSIGYGVR_	ENSG00000182324|ENST00000342291|KCNJ14	54.776311868738084	0.25715957988447635	5				NaN	NaN	0	NaN	1016	2869	3883
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3888	16.418	NaN	821.72	30	0	115.27	0.106	+			13305	GKESNCKKGV	10	36	525.2729026527779	NaN	0	525.2731323242188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GKESNCKKGV_	ENSG00000133302|ENST00000265140|SLF1	19.262678746197807	0.4201028297492154	5				NaN	NaN	0	NaN	1017	2869	3883
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3889	16.42	NaN	2329	30	0	669.91	0.035			+	16614	HGSRNWCK	8	51	494.2329359563757	986.4513189795514	2	494.2320556640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HGSRNWCK_	REV__DEFB118|p.Q37Lfs*23|1|0.12|ENSG00000131068|chr20:31372908-31372909|AA/-|frameshift_variant;REV__ENSG00000131068|ENST00000253381|DEFB118	37.15910966729921	0.6739408393984688	5				NaN	NaN	0	NaN	1018	2869	3883
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3901	16.446	NaN	93318	30	0	10622	0.204				-1	 	0	103	499.27057893322853	996.5266049332571	2	499.2690124511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1027	2872	3900
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3902	16.45	NaN	4496.4	30	0	393.62	0.106	+			39112	SSTDINVKK	9	59	496.27573427237706	990.5369156115542	2	496.27423095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSTDINVKK_	ENSG00000164749|ENST00000396423|HNF4G;nc|ENSG00000164749|Q14541-2|HNF4G;nc|ENSG00000164749|Q14541|HNF4G	98.58198989935565	0.04066992115528678	5				NaN	NaN	0	NaN	1028	2872	3900
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3903	16.452	NaN	4915.7	30	0	603.7	0.106	+			38413	SSAEYSVHK	9	70	504.24295648718623	NaN	0	504.24310302734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSAEYSVHK_	ENSG00000058085|ENST00000264144|LAMC2;LAMC2|p.V488Sfs*24|1|0.32|ENSG00000058085|chr1:183227688-183227688|G/-|frameshift_variant;nc|ENSG00000058085|Q13753-2|LAMC2	162.25246889848123	0.012451061346240942	5				NaN	NaN	0	NaN	1029	2872	3900
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3904	16.454	NaN	3167.5	30	0	1082.4	0.106			+	9968	ERFEELAQ	8	45	511.24983156730553	1020.4851102014111	2	511.248291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ERFEELAQ_	REV__ENSG00000144320|ENST00000272748|LNPK;REV__nc|ENSG00000144320|Q9C0E8-2|LNPK;REV__nc|ENSG00000144320|Q9C0E8-4|LNPK	36.446750945000026	0.6783611724927969	5				NaN	NaN	0	NaN	1030	2872	3900
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3905	16.455	NaN	1313.5	30	0	217.98	0.036	+			44925	TVAHKIMQK	9	47	528.3048141618013	NaN	0	528.3048706054688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TVAHKIMQK_	ENSG00000134453|ENST00000379888|RBM17	117.81106730687013	0.0026430897281881707	5				NaN	NaN	0	NaN	1031	2872	3900
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3919	16.485	NaN	7698.4	30	0	1276.1	0.214				-1	 	0	60	482.7396742016783	963.4647954701567	2	482.73846435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1042	2875	3918
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3920	16.488	NaN	30411	30	0	6149.8	0.106			+	11223	FIDLNEEK	8	75	504.25500531470004	1006.4954576962001	2	504.254638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FIDLNEEK_	REV__tr|U7SR06|U7SR06_FUSNUReleasefactorglutaminemethyltransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=prmCPE=3SV=1	107.00750918261382	0.24681273948614665	5				NaN	NaN	0	NaN	1043	2875	3918
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3921	16.49	NaN	1727	30	0	200.33	0.106	+			20156	KEKRIFYL	8	55	548.828600384142	1095.6426478350838	2	548.8277587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEKRIFYL_	CON__Q58D62	45.9519527083369	0.6193794311207887	5				NaN	NaN	0	NaN	1044	2875	3918
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3922	16.492	NaN	1245.5	30	0	228.17	0.106	+			32199	QSVMEQNTV	9	39	518.2443515313722	1034.4741501295443	2	518.2440185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QSVMEQNTV_	ENSG00000118482|ENST00000262043|PHF3;nc|ENSG00000118482|Q92576-2|PHF3;PHF3|p.K1984Vfs*10|2|0.05|ENSG00000118482|chr6:63713536-63713537|-/TGTGAATCACTAT|frameshift_variant	24.519189625965996	0.574102787014149	5				NaN	NaN	0	NaN	1045	2875	3918
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3923	16.494	NaN	3639	30	0	1849.7	0.106	+			8353	EALGILQSFT	10	40	360.19752715870834	1077.570752076325	3	360.1971130371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EALGILQSFT_	SATB2|p.I633T|1|0.04|ENSG00000119042|chr2:199272515-199272515|A/G|missense_variant	27.882242232435846	0.6521336255503853	5				NaN	NaN	0	NaN	1046	2875	3918
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3924	16.496	NaN	692.45	30	0	71.414	0.038				-1	SVCPSLVCFSP	11	34	626.7880812939175	1251.5616096546348	2	626.7868041992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Carbamidomethyl (C)	_SVC(Carbamidomethyl (C))PSLVC(Carbamidomethyl (C))FSP_	ENST00000487017.5_1_3:48608910-48609324:-|nuORF	13.45404412870281	0.8074920481021843	5				NaN	NaN	0	NaN	1047	2875	3918
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3925	16.496	NaN	581.49	30	0	150.43	0.143				-1	AIQDCGGVPA	10	27	329.8240051269531	NaN	0	329.8240051269531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_AIQDC(Carbamidomethyl (C))GGVPA_	ARVCF|p.R440Q|1|0.37|ENSG00000099889|chr22:19979820-19979820|C/T|missense_variant	23.52269567125451	0.42010282974921537	5				NaN	NaN	0	NaN	1048	2875	3918
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3935	16.52	NaN	129790	30	0	14648	0.201				-1	 	0	104	470.76496268245097	939.515372431702	2	470.763916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1055	2878	3934
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3936	16.524	NaN	8329	30	0	2855.2	0.106	+			11793	FSPPSVGHTC	10	41	516.2343709808285	1030.454189028457	2	516.2335815429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FSPPSVGHTC_	ENST00000406386.7_1_22:38169800-38170091:+|nuORF	27.882242232435846	0.6521336255503853	5				NaN	NaN	0	NaN	1056	2878	3934
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3937	16.526	NaN	11324	30	0	4730.8	0.106				-1	 	0	42	334.86317926552067	1001.5677083967621	3	334.8625183105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1057	2878	3934
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3938	16.528	NaN	5813.7	30	0	518.67	0.106				-1	 	0	63	444.76782055997757	887.5210881867552	2	444.7666320800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1058	2878	3934
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3939	16.53	NaN	6555.9	30	0	767.15	0.106				-1	 	0	59	435.2468190522102	868.4790851712204	2	435.2454833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1059	2878	3934
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3940	16.531	NaN	2454.2	30	0	429.27	0.106	+			16746	HLPVGAPQ	8	50	409.73049067836683	817.4464284235337	2	409.7295837402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HLPVGAPQ_	nc|ENSG00000106852|Q9UPM6-2|LHX6;nc|ENSG00000106852|Q9UPM6-4|LHX6;nc|ENSG00000106852|Q9UPM6-5|LHX6	37.028477286268924	0.6747514403204248	5				NaN	NaN	0	NaN	1060	2878	3934
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3941	16.533	NaN	2086.3	30	0	632.74	0.037	+			18698	ITDHRIKLT	9	31	366.221331060179	1095.642163780737	3	366.220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ITDHRIKLT_	tr|U7SPH6|U7SPH6_FUSNUPeptidechainreleasefactor1OS=FusobacteriumnucleatumCTI-5OX=1316586GN=prfAPE=3SV=1	29.170058357718403	0.5306379469863586	5				NaN	NaN	0	NaN	1061	2878	3934
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3953	16.559	NaN	13415	30	0	5576.6	0.214				-1	 	0	53	377.55276761079404	1129.636473432582	3	377.55206298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1070	2881	3952
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3954	16.563	NaN	3377.8	30	0	403.7	0.106				-1	 	0	48	391.7305347225986	781.4465165119972	2	391.72967529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1071	2881	3952
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3955	16.565	NaN	13291	30	0	3621.6	0.106				-1	 	0	76	565.8253730798491	1129.636193226498	2	565.825439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1072	2881	3952
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3956	16.567	NaN	1609.1	30	0	189.36	0.106				-1	 	0	44	357.72276583371007	713.4309787342202	2	357.7220153808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1073	2881	3952
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3957	16.569	NaN	864.47	30	0	151.57	0.106			+	-1	QGGSNCNVHC	10	34	538.2064595456411	1074.3983661580821	2	538.2056884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_QGGSNCNVHC(Carbamidomethyl (C))_	REV__ENST00000370620.5_1_X:135749294-135749660:-|nuORF	19.996771675451527	0.7148376616046445	5				NaN	NaN	0	NaN	1074	2881	3952
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3958	16.57	NaN	5138.9	30	0	1005.2	0.106	+			20964	KKEGEKIR	8	59	494.3018995641516	986.5892461951032	2	494.3009338378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KKEGEKIR_	ENSG00000139112|ENST00000266458|GABARAPL1;nc|ENSG00000139112|Q9H0R8-2|GABARAPL1;nc|ENSG00000279980|Q9BY60|GABARAPL3	84.9155231211612	0.2928622555056503	5				NaN	NaN	0	NaN	1075	2881	3952
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3959	16.572	NaN	710.11	30	0	66.187	0.035			+	-1	DHHLATCQG	9	28	519.7257080078125	NaN	0	519.7257080078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_DHHLATC(Carbamidomethyl (C))QG_	REV__ENSG00000130038|ENST00000440314|CRACR2A;REV__nc|ENSG00000130038|Q9BSW2-1|CRACR2A	23.04248740728303	0.3589936788096251	5				NaN	NaN	0	NaN	1076	2881	3952
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3972	16.6	NaN	10014	30	0	1603.8	0.214	+			33316	RGSAEVQDCS	10	66	526.2269366627377	1050.4393203922752	2	526.2261352539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RGSAEVQDCS_	ENSG00000071909|ENST00000408978|MYO3B;ENST00000409940.6_1_2:171034716-171376051:+|nuORF;ENST00000438642.6_1_2:171034716-171400468:+|nuORF;MYO3B|p.K1243Sfs*25|1|0.21|ENSG00000071909|chr2:170543980-170543980|A/-|frameshift_variant;nc|ENSG00000071909|Q8WXR4-2|MYO3B;nc|ENSG00000071909|Q8WXR4-3|MYO3B;nc|ENSG00000071909|Q8WXR4-4|MYO3B;nc|ENSG00000071909|Q8WXR4-5|MYO3B;nc|ENSG00000071909|Q8WXR4-6|MYO3B;nc|ENSG00000071909|Q8WXR4-7|MYO3B	36.446750945000026	0.5818864909973037	5				NaN	NaN	0	NaN	1086	2884	3971
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3973	16.604	NaN	3552.2	30	0	235.45	0.106				-1	 	0	56	442.7759661568592	883.5373793805185	2	442.7746276855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1087	2884	3971
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3974	16.606	NaN	2303.5	30	0	379.1	0.106				-1	 	0	54	481.2253113276417	960.4360697220834	2	481.2237243652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1088	2884	3971
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3975	16.608	NaN	2962.8	30	0	1404.7	0.106	+			32516	QVQPVDGATRK	11	45	599.8319721638658	1197.6493913945314	2	599.8305053710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QVQPVDGATRK_	ENSG00000182307|ENST00000331434|C8orf33;ENST00000524395.5_1_8:146277890-146279540:+|nuORF;ENST00000530455.5_1_8:146277890-146279540:+|nuORF;ENST00000534350.5_1_8:146279384-146279540:+|nuORF;nc|nan|Q9H7E9-2|C8orf33	68.84614121027924	0.24535906747804975	5				NaN	NaN	0	NaN	1089	2884	3971
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3976	16.61	NaN	4249	30	0	759.79	0.106	+			25242	LNHLEPPVKH	10	63	592.3318543709154	1182.6491558086307	2	592.3306884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LNHLEPPVKH_	ENSG00000182446|ENST00000331134|NPLOC4;nc|ENSG00000182446|Q8TAT6-2|NPLOC4;NPLOC4|p.F249Lfs*88|1|0.11|ENSG00000182446|chr17:81604635-81604635|A/-|frameshift_variant	56.632244143249146	0.3964695498866976	5				NaN	NaN	0	NaN	1090	2884	3971
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3977	16.611	NaN	1927.7	30	0	319.5	0.106	+			34955	SAAKSLLKK	9	53	473.30769703814195	NaN	0	473.3077087402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SAAKSLLKK_	ENSG00000145349|ENST00000511664|CAMK2D;nc|ENSG00000145349|Q13557-10|CAMK2D;nc|ENSG00000145349|Q13557-11|CAMK2D;nc|ENSG00000145349|Q13557-12|CAMK2D;nc|ENSG00000145349|Q13557-3|CAMK2D;nc|ENSG00000145349|Q13557-4|CAMK2D;nc|ENSG00000145349|Q13557-5|CAMK2D;nc|ENSG00000145349|Q13557-6|CAMK2D;nc|ENSG00000145349|Q13557-8|CAMK2D;nc|ENSG00000145349|Q13557-9|CAMK2D;nc|ENSG00000145349|Q13557|CAMK2D	82.7504851949679	0.061958946529908215	5				NaN	NaN	0	NaN	1091	2884	3971
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3978	16.613	NaN	1125.3	30	0	188.91	0.038			+	-1	VVEWACSSYK	10	33	614.7865362933826	1227.558519653565	2	614.7850952148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_VVEWAC(Carbamidomethyl (C))SSYK_	REV__ENSG00000120242|ENST00000380205|IFNA8	15.641811463095205	0.7369665665077569	5				NaN	NaN	0	NaN	1092	2884	3971
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3991	16.642	NaN	2131.3	30	0	525.56	0.214	+			48415	VTIKVLGEEL	10	46	550.8308261234829	NaN	0	550.8308715820312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTIKVLGEEL_	ENST00000367256.9_1_6:152443573-152639413:-|nuORF	31.634271133179894	0.39630454568332174	5				NaN	NaN	0	NaN	1102	2887	3990
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3992	16.645	NaN	2022.4	30	0	196.4	0.106	+			13746	GQCGPVGVRK	10	55	529.2825754479338	NaN	0	529.2828979492188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GQC(Carbamidomethyl (C))GPVGVRK_	ENSG00000204231|ENST00000374680|RXRB;nc|ENSG00000204231|P28702-3|RXRB;RXRB|p.G327Vfs*10|1|0.45|ENSG00000204231|chr6:33196447-33196447|C/-|frameshift_variant;RXRB|p.P176Lfs*4|1|0.65|ENSG00000204231|chr6:33198421-33198421|G/-|frameshift_variant	69.6276240434122	0.15565754179716834	5				NaN	NaN	0	NaN	1103	2887	3990
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3993	16.647	NaN	1610	30	0	292.41	0.106			+	46949	VKDVIAQK	8	52	450.7802549451805	899.545956957161	2	450.77947998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VKDVIAQK_	REV__ENSG00000158623|ENST00000425248|COPG2;REV__ENSG00000181789|ENST00000314797|COPG1;REV__nc|ENSG00000158623|Q9UBF2-2|COPG2	56.72105179125745	0.5342425954139568	5				NaN	NaN	0	NaN	1104	2887	3990
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3994	16.649	NaN	589.28	30	0	74.935	0.106				-1	VLVPCTFFH	9	33	560.2844848632812	NaN	0	560.2844848632812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_VLVPC(Carbamidomethyl (C))TFFH_	ENSG00000105383|ENST00000262262|CD33;ENST00000601785.5_1_19:51728415-51738809:+|nuORF;nc|ENSG00000105383|P20138-2|CD33	18.324413293986947	0.3749620627292244	5				NaN	NaN	0	NaN	1105	2887	3990
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	3995	16.651	NaN	754.77	30	0	105.86	0.039	+			10432	EVKISAKKDIM	11	47	631.362538661699	1260.7105243901979	2	631.360107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EVKISAKKDIM_	CCDC168|p.G4714Rfs*2|1|0.22|ENSG00000175820|chr13:102736557-102736558|-/T|frameshift_variant;CCDC168|p.G6141Lfs*25|1|0.03|ENSG00000175820|chr13:102732276-102732277|-/AGGAAAAATCACCAAACACTAG|frameshift_variant;CCDC168|p.K5937Nfs*10|1|0.37|ENSG00000175820|chr13:102732886-102732886|T/-|frameshift_variant;CCDC168|p.K6236Nfs*3|1|0.42|ENSG00000175820|chr13:102731989-102731989|T/-|frameshift_variant;CCDC168|p.L5048Ifs*6|1|0.12|ENSG00000175820|chr13:102735555-102735556|-/T|frameshift_variant;CCDC168|p.L5234*|1|0.12|ENSG00000175820|chr13:102735001-102735001|A/-|frameshift_variant;CCDC168|p.M5025Cfs*8|1|0.29|ENSG00000175820|chr13:102735624-102735624|T/-|frameshift_variant;CCDC168|p.T4543Lfs*5|1|0.1|ENSG00000175820|chr13:102737070-102737070|T/-|frameshift_variant;ENSG00000175820|ENST00000322527|CCDC168	33.921630207806714	0.6339809607503234	5				NaN	NaN	0	NaN	1106	2887	3990
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4004	16.671	NaN	4300.2	30	0	943.36	0.214				-1	 	0	56	436.7647731826607	871.5149934321214	2	436.7633972167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1112	2890	4003
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4005	16.675	NaN	3014.8	30	0	694.9	0.035				-1	SCCPMSCAK	9	52	522.1928273005935	1042.371101667987	2	522.1929321289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_SCC(Carbamidomethyl (C))PMSC(Carbamidomethyl (C))AK_	ENSG00000205362|ENST00000290705|MT1A	31.529811441608018	0.5085848003137583	5				NaN	NaN	0	NaN	1113	2890	4003
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4010	16.69	NaN	66470	30	0	20065	0.214				-1	 	0	79	379.2333877125111	1134.6783337377333	3	379.2325134277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1115	2893	4009
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4011	16.693	NaN	15105	30	0	4895.4	0.106	+			20254	KEMKSLKKK	9	71	568.3463671572581	1134.678181381316	2	568.345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_KEM(Oxidation (M))KSLKKK_	ENSG00000119906|ENST00000238961|SLF2;nc|ENSG00000119906|Q8IX21-2|SLF2	69.6276240434122	0.14239879520340665	5				NaN	NaN	0	NaN	1116	2893	4009
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4012	16.695	NaN	3551.9	30	0	758.09	0.106	+			5043	ATSGGSAEQIK	11	69	524.7674983496163	NaN	0	524.767822265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATSGGSAEQIK_	ENSG00000114030|ENST00000344337|KPNA1	77.28774426308219	0.0954584509904582	5				NaN	NaN	0	NaN	1117	2893	4009
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4013	16.697	NaN	5315.4	30	0	1337.2	0.036	+			35629	SCCPVGCSKC	10	42	348.46457554295176	1042.3718972290553	3	348.4640808105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_SCC(Carbamidomethyl (C))PVGCSKC_	ENSG00000198417|ENST00000334350|MT1F;ENST00000564295.1_1_16:56692857-56693073:+|nuORF	47.227680397652996	0.4825456260682108	5				NaN	NaN	0	NaN	1118	2893	4009
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4020	16.715	NaN	4326.4	30	0	681.95	0.214			+	24937	LKTVDKVN	8	60	458.77762345086546	915.540693968531	2	458.77642822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LKTVDKVN_	REV__ENSG00000049130|ENST00000644744|KITLG;REV__KITLG|p.G209Wfs*41|1|0.41|ENSG00000049130|chr12:88507118-88507119|-/G|frameshift_variant;REV__KITLG|p.K125Nfs*31|2|0.29|ENSG00000049130|chr12:88516479-88516479|T/-|frameshift_variant;REV__nc|ENSG00000049130|P21583-2|KITLG	55.50420428727701	0.5462892107279674	5				NaN	NaN	0	NaN	1122	2896	4019
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4021	16.719	NaN	3260.5	30	0	408.39	0.106			+	34016	RSKCHMLLA	9	64	529.7844399960729	1057.5543270589458	2	529.7835693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RSKCHMLLA_	REV__RSL1D1|p.T45M|1|0.27|ENSG00000171490|chr16:11850390-11850390|G/A|missense_variant	47.91560031466742	0.327412564698279	5				NaN	NaN	0	NaN	1123	2896	4019
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4022	16.721	NaN	5144.2	30	0	1675.5	0.106				-1	 	0	52	330.8510639491132	989.5313624475397	3	330.8504638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1124	2896	4019
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4023	16.723	NaN	1321.8	30	0	240.14	0.106	+			39976	STMKTMEDK	9	38	535.7474522113522	1069.4803514895043	2	535.7471313476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STMKTMEDK_	EAPP|p.F278Sfs*4|1|0.34|ENSG00000129518|chr14:34516335-34516335|A/-|frameshift_variant;ENSG00000129518|ENST00000250454|EAPP;ENST00000555683.1_1_14:35005207-35008876:-|nuORF	33.921630207806714	0.48623198279849766	5				NaN	NaN	0	NaN	1125	2896	4019
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4024	16.725	NaN	1684.6	30	0	107.17	0.106	+			43129	TERQKVHCL	9	52	585.8070939695026	1169.599635005805	2	585.8058471679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_TERQKVHC(Carbamidomethyl (C))L_	ENSG00000110367|ENST00000534980|DDX6	63.30626980617807	0.18605348971131092	5				NaN	NaN	0	NaN	1126	2896	4019
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4025	16.726	NaN	1242.2	30	0	216.08	0.106	+			4476	ATIRTTKWE	9	46	553.3047663670351	NaN	0	553.3048095703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATIRTTKWE_	ENSG00000154237|ENST00000388948|LRRK1	49.536043120802724	0.20989033510253738	5				NaN	NaN	0	NaN	1127	2896	4019
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4026	16.728	NaN	1955.2	30	0	289.94	0.037			+	46636	VGAVRSAS	8	39	373.71125086423757	NaN	0	373.2288513183594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VGAVRSAS_	REV__ENST00000587681.5_1_19:10229095-10230535:-|nuORF	47.91560031466742	1.7418937515398478	5				NaN	NaN	0	NaN	1128	2896	4019
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4034	16.747	NaN	8951.9	30	0	1409.4	0.214				-1	 	0	83	497.27279010779023	992.5310272823805	2	497.2716369628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1133	2899	4033
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4035	16.751	NaN	3869.4	30	0	520.33	0.106				-1	 	0	57	483.7731777580416	965.5318025828832	2	483.7717590332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1134	2899	4033
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4036	16.753	NaN	2064.7	30	0	431.33	0.106			+	46637	VGAVRSAS	8	41	373.71125086423757	NaN	0	373.7113342285156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VGAVRSAS_	REV__ENST00000587681.5_1_19:10229095-10230535:-|nuORF	26.79610172149135	1.7418937515398478	5				NaN	NaN	0	NaN	1135	2899	4033
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4037	16.754	NaN	1917.2	30	0	350.65	0.106	+			29439	PCHLYIVEI	9	64	543.7845336135156	NaN	0	543.7841796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PCHLYIVEI_	ENSG00000173821|ENST00000582970|RNF213;nc|ENSG00000173821|Q63HN8-4|RNF213;nc|ENSG00000173821|Q63HN8|RNF213;RNF213|p.C5022Lfs*7|1|0.3|ENSG00000173821|chr17:80389237-80389237|G/-|frameshift_variant;RNF213|p.P2167Lfs*64|1|0.09|ENSG00000173821|chr17:80344834-80344835|-/T|frameshift_variant	56.72105179125745	0.16330365735109603	5				NaN	NaN	0	NaN	1136	2899	4033
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4038	16.756	NaN	1578.3	30	0	128.08	0.036	+			1852	AIKQREALE	9	52	529.3047982500005	1056.595043566801	2	529.3043823242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AIKQREALE_	KCNB1|p.R432Q|1|0.28|ENSG00000158445|chr20:49374265-49374265|C/T|missense_variant	26.69291269510374	0.5537881896960711	5				NaN	NaN	0	NaN	1137	2899	4033
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4046	16.775	NaN	14477	30	0	3528.8	0.214	+			42300	TAEVTIEAQPS	11	81	573.2876327553298	1144.5607125774595	2	573.286865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAEVTIEAQPS_	PSG9|p.P43S|1|0.09|ENSG00000183668|chr19:43268087-43268087|G/A|missense_variant	75.04331003522576	0.19369523587789836	5				NaN	NaN	0	NaN	1142	2902	4045
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4047	16.778	NaN	6575.6	30	0	2058.5	0.106	+			19393	KAMVPARSL	9	61	486.78611003871674	971.5576671442335	2	486.7843322753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KAMVPARSL_	ENST00000376673.7_1_13:98009748-98017404:+|nuORF	74.25504064058377	0.12238981753128622	5				NaN	NaN	0	NaN	1143	2902	4045
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4048	16.78	NaN	9932.2	30	0	5298.2	0.106				-1	 	0	57	324.8596113009269	971.5570045029806	3	324.8587646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1144	2902	4045
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4049	16.782	NaN	2278	30	0	498.06	0.106	+			20360	KESKEAAQL	9	51	502.2757160031833	1002.5368790731666	2	502.2742919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KESKEAAQL_	AP1G2|p.L755Cfs*3|1|0.18|ENSG00000213983|chr14:23559844-23559844|G/-|frameshift_variant;AP1G2|p.N690Tfs*6|1|0.41|ENSG00000213983|chr14:23560343-23560343|T/-|frameshift_variant;ENSG00000213983|ENST00000397120|AP1G2;ENST00000460049.6_1_14:24028960-24033376:-|nuORF;ENST00000535852.6_1_14:24028960-24035624:-|nuORF	39.873155843976775	0.4217472186153936	5				NaN	NaN	0	NaN	1145	2902	4045
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4050	16.784	NaN	3778.9	30	0	809.63	0.035	+			14631	GTGNMEIKK	9	50	489.2588232746429	976.5030936160858	2	489.2582702636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTGNMEIKK_	ENSG00000138496|ENST00000682323|PARP9;nc|ENSG00000138496|Q8IXQ6-3|PARP9;nc|ENSG00000138496|Q8IXQ6|PARP9;PARP9|p.T633Pfs*5|2|0.22|ENSG00000138496|chr3:122537047-122537047|T/-|frameshift_variant	85.86182877749512	0.07653218437724067	5				NaN	NaN	0	NaN	1146	2902	4045
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4062	16.811	NaN	21457	30	0	6289.6	0.212			+	8990	EFRAPRFECCH	11	68	697.8078358389233	1393.6011187446466	2	697.8058471679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EFRAPRFECCH_	REV__ENST00000506043.1_1_X:77218054-77218261:+|nuORF	72.09557110113691	0.21826960075221502	5				NaN	NaN	0	NaN	1155	2905	4061
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4063	16.814	NaN	1787.5	30	0	398.1	0.106	+			39335	STCDHGIVAK	10	59	544.264328230424	NaN	0	544.2642822265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_STC(Carbamidomethyl (C))DHGIVAK_	ENSG00000130826|ENST00000369550|DKC1;nc|ENSG00000130826|O60832-2|DKC1	95.81516180277367	0.03187299381579768	5				NaN	NaN	0	NaN	1156	2905	4061
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4064	16.816	NaN	2685.8	30	0	1152.4	0.106			+	31486	QLCGLPERPD	10	26	376.52313232421875	NaN	0	376.52313232421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QLCGLPERPD_	REV__ENSG00000154743|ENST00000284995|TSEN2;REV__nc|ENSG00000154743|Q8NCE0-2|TSEN2;REV__nc|ENSG00000154743|Q8NCE0-3|TSEN2;REV__nc|ENSG00000154743|Q8NCE0-5|TSEN2	21.68575002086885	0.4201028297492154	5				NaN	NaN	0	NaN	1157	2905	4061
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4065	16.818	NaN	1879.7	30	0	319.5	0.106			+	23490	LAFSGLAGPP	10	44	465.25714706756884	928.4997412019377	2	465.2559814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LAFSGLAGPP_	REV__ENSG00000104967|ENST00000263257|NOVA2	31.954861631926434	0.6188749698950511	5				NaN	NaN	0	NaN	1158	2905	4061
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4066	16.82	NaN	3267.3	30	0	756.17	0.106	+			22716	KVAPAPAVVKK	11	51	369.9136963999608	1106.7192598000825	3	370.24737548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KVAPAPAVVKK_	ENSG00000148303|ENST00000323345|RPL7A;ENST00000424041.1_1_20:36073469-36073910:-|nuORF;ENST00000463740.5_1_9:136215098-136217195:+|nuORF	112.2953585152457	0.03526820493220478	5				NaN	NaN	0	NaN	1159	2905	4061
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4067	16.822	NaN	869.8	30	0	181.06	0.106				-1	SLPLPMDSYM	10	31	585.2667846679688	NaN	0	585.2667846679688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_SLPLPMDSYM(Oxidation (M))_	ENSG00000129204|ENST00000574788|USP6;ENSG00000170832|ENST00000300896|USP32;ENST00000575709.5_1_17:5042349-5076270:+|nuORF;ENST00000585720.1_1_17:58285392-58286144:-|nuORF;ENST00000602493.5_1_17:60360056-60363323:-|nuORF;nc|ENSG00000129204|P35125-2|USP6;nc|ENSG00000129204|P35125-3|USP6;USP32|p.G1453Afs*14|1|0.37|ENSG00000170832|chr17:60181514-60181514|C/-|frameshift_variant;USP6|p.E983Gfs*34|1|0.12|ENSG00000129204|chr17:5162911-5162912|-/G|frameshift_variant;USP6|p.L931Pfs*6|1|0.06|ENSG00000129204|chr17:5155567-5155568|CA/-|frameshift_variant;USP6|p.R1206Gfs*38|1|0.11|ENSG00000129204|chr17:5170574-5170574|G/-|frameshift_variant	15.641811463095205	0.4201028297492154	5				NaN	NaN	0	NaN	1160	2905	4061
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4068	16.823	NaN	1783.2	30	0	184.23	0.036	+			22717	KVAPAPAVVKK	11	64	554.3669795285853	1106.7194061239704	2	554.36669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KVAPAPAVVKK_	ENSG00000148303|ENST00000323345|RPL7A;ENST00000424041.1_1_20:36073469-36073910:-|nuORF;ENST00000463740.5_1_9:136215098-136217195:+|nuORF	57.148748479083515	0.34890646465650643	5				NaN	NaN	0	NaN	1161	2905	4061
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4081	16.852	NaN	22796	30	0	4003	0.214				-1	 	0	60	322.8509930092185	965.5311496278555	3	322.85040283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1171	2908	4080
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4082	16.856	NaN	4147.9	30	0	827.34	0.106	+			41975	SVYAGGRGPAK	11	65	531.7891075830623	1061.5636622329246	2	531.7886962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVYAGGRGPAK_	ENST00000296473.7_3_3:49967084-49967270:-|nuORF	88.17693792209575	0.10623774136611049	5				NaN	NaN	0	NaN	1172	2908	4080
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4083	16.858	NaN	5578.1	30	0	1048.1	0.106				-1	 	0	63	507.81992866692065	1013.6253044006413	2	507.8187561035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1173	2908	4080
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4084	16.86	NaN	2641.7	30	0	383.58	0.106			+	22023	KSGSKKKAPA	10	55	501.30983900333194	1000.6051250734639	2	501.7771301269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KSGSKKKAPA_	REV__ENSG00000125844|ENST00000377813|RRBP1;REV__nc|ENSG00000125844|Q9P2E9-3|RRBP1;REV__RRBP1|p.A628Gfs*69|1|0.35|ENSG00000125844|chr20:17621915-17621916|-/T|frameshift_variant	51.52775601994872	0.4429225830406686	5				NaN	NaN	0	NaN	1174	2908	4080
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4085	16.861	NaN	1262.3	30	0	162.02	0.106	+			2299	AMCYLKLR	8	40	499.27057893322853	996.5266049332571	2	499.2687683105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AMCYLKLR_	ENSG00000096060|ENST00000357266|FKBP5	28.2542754592877	0.7411748056684583	5				NaN	NaN	0	NaN	1175	2908	4080
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4086	16.863	NaN	890.87	30	0	116.39	0.106				-1	LRALARVPS	9	45	512.817626953125	NaN	0	512.817626953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LRALARVPS_	ENST00000532581.5_1_11:123431173-123490076:+|nuORF	27.882242232435846	0.3367954786602879	5				NaN	NaN	0	NaN	1176	2908	4080
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4087	16.865	NaN	1019.6	30	0	431.9	0.034	+			36683	SGPGENRSM	9	35	467.7065125997349	933.3984722662698	2	467.70513916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SGPGENRSM_	ENSG00000182944|ENST00000397938|EWSR1;ENST00000479135.5_1_22:29673993-29684776:+|nuORF;ENST00000483415.5_1_22:29664325-29684776:+|nuORF;EWSR1|p.M605Hfs*40|1|0.09|ENSG00000182944|chr22:29299731-29299732|-/C|frameshift_variant;EWSR1|p.M605Tfs*41|1|0.09|ENSG00000182944|chr22:29299733-29299734|-/CCTC|frameshift_variant;EWSR1|p.P622Lfs*4|1|0.39|ENSG00000182944|chr22:29299775-29299775|G/-|frameshift_variant;nc|ENSG00000182944|Q01844-3|EWSR1;nc|ENSG00000182944|Q01844-4|EWSR1;nc|ENSG00000182944|Q01844-5|EWSR1;nc|ENSG00000182944|Q01844-6|EWSR1	40.05817265558897	0.419577045485086	5				NaN	NaN	0	NaN	1177	2908	4080
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4100	16.893	NaN	11661	30	0	3871.4	0.214			+	32144	QSNKLVELDM	10	73	588.8005656762656	1175.586578419331	2	588.7994384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QSNKLVELDM_	REV__ENST00000476798.1_1_6:108041676-108041823:-|nuORF	98.58198989935565	0.0819402597096128	5				NaN	NaN	0	NaN	1187	2911	4099
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4101	16.896	NaN	3233.4	30	0	436.24	0.106				-1	 	0	40	332.67497191129894	663.3353908893979	2	332.6742858886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1188	2911	4099
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4102	16.899	NaN	2681.3	30	0	371.49	0.106				-1	 	0	42	400.71416485456007	799.4137767759202	2	400.71343994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1189	2911	4099
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4103	16.9	NaN	1302	30	0	195.01	0.106			+	-1	TKAMDCPSP	9	45	511.71785439046465	NaN	0	511.7179870605469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_TKAM(Oxidation (M))DC(Carbamidomethyl (C))PSP_	REV__CEP192|p.R2464Kfs*5|1|0.13|ENSG00000101639|chr18:13116476-13116477|-/AAATCCA|frameshift_variant;REV__ENSG00000101639|ENST00000506447|CEP192;REV__ENST00000513432.5_1_18:13059017-13124766:+|nuORF;REV__ENST00000540847.6_1_18:13088862-13124766:+|nuORF;REV__nc|ENSG00000101639|Q8TEP8-1|CEP192	26.69291269510374	0.34280015626154364	5				NaN	NaN	0	NaN	1190	2911	4099
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4104	16.902	NaN	1457.8	30	0	172.78	0.106				-1	 	0	49	470.76496268245097	939.515372431702	2	470.7632751464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1191	2911	4099
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4105	16.904	NaN	2189.6	30	0	343.65	0.036			+	50293	WSGYAVKGTL	10	60	541.2871790124655	1080.5598050917308	2	541.2852783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_WSGYAVKGTL_	REV__ENSG00000173597|ENST00000310613|SULT1B1;REV__SULT1B1|p.L192Cfs*6|2|0.23|ENSG00000173597|chr4:69733435-69733435|A/-|frameshift_variant	38.714083909724	0.5609941533943991	5				NaN	NaN	0	NaN	1192	2911	4099
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4106	16.905	NaN	600.55	30	0	68.099	0.14			+	17620	IEHQVIHSA	9	35	517.2750854492188	NaN	0	517.2750854492188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IEHQVIHSA_	REV__ZNF573|p.R238I|1|0.25|ENSG00000189144|chr19:37739777-37739777|C/A|missense_variant	24.20275056022122	0.35506675290109213	5				NaN	NaN	0	NaN	1193	2911	4099
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4120	16.937	NaN	3810.4	30	0	504.2	0.215	+			42486	TANDANTKY	9	60	499.23419055150885	996.4538281698177	2	499.23291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TANDANTKY_	ENSG00000149182|ENST00000524782|ARFGAP2;ENST00000395449.7_1_11:47187835-47198404:-|nuORF;ENST00000524727.5_1_11:47194869-47198404:-|nuORF;ENST00000527097.5_1_11:47193699-47198404:-|nuORF;nc|ENSG00000149182|Q8N6H7-2|ARFGAP2	88.17693792209575	0.07000514020414955	5				NaN	NaN	0	NaN	1204	2914	4119
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4121	16.94	NaN	4367.4	30	0	954.92	0.106			+	-1	VEPVMPLIG	9	60	485.7672157650745	969.5198785969491	2	485.76605224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_VEPVM(Oxidation (M))PLIG_	REV__ENSG00000124214|ENST00000371856|STAU1;REV__nc|ENSG00000124214|O95793-2|STAU1;REV__nc|ENSG00000124214|O95793-3|STAU1	31.954861631926434	0.5046124803899898	5				NaN	NaN	0	NaN	1205	2914	4119
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4122	16.942	NaN	1643.1	30	0	135.6	0.106	+			28693	NMVDKKEVV	9	59	531.2842407226562	NaN	0	531.2842407226562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NMVDKKEVV_	tr|U7SM08|U7SM08_FUSNUProbableD-serinedehydrataseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=dsdAPE=3SV=1	45.97224482568171	0.23445038899310136	5				NaN	NaN	0	NaN	1206	2914	4119
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4123	16.944	NaN	2674.6	30	0	651.27	0.106	+			14005	GSEGPSYAK	9	48	448.2125444469405	894.410535960681	2	448.2118225097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GSEGPSYAK_	ENSG00000105197|ENST00000607714|TIMM50;ENST00000595286.1_1_19:39971511-39973801:+|nuORF;ENST00000598125.5_1_19:39971493-39973604:+|nuORF;nc|ENSG00000105197|Q3ZCQ8-2|TIMM50;TIMM50|p.H211Mfs*21|1|0.44|ENSG00000105197|chr19:39486426-39486426|C/-|frameshift_variant	67.49366992349736	0.1516260258713357	5				NaN	NaN	0	NaN	1207	2914	4119
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4124	16.946	NaN	2881.1	30	0	1710.6	0.106			+	33315	RGRWTGPSS	9	35	502.2575048166194	1002.5004567000389	2	502.2564697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RGRWTGPSS_	REV__CCDC13|p.G697Afs*3|1|0.38|ENSG00000244607|chr3:42709038-42709038|C/-|frameshift_variant;REV__ENSG00000244607|ENST00000310232|CCDC13;REV__ENST00000479576.5_1_3:42787372-42794186:-|nuORF	16.473147378115264	0.6112419832031293	5				NaN	NaN	0	NaN	1208	2914	4119
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4125	16.948	NaN	959.45	30	0	100.18	0.037	+			20763	KHKKLPEEL	9	48	561.3380126953125	NaN	0	561.3380126953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KHKKLPEEL_	ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1	35.61828744233558	0.29773779453147337	5				NaN	NaN	0	NaN	1209	2914	4119
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4126	16.948	NaN	1327.1	30	0	204.35	0.138	+			38735	SSLLLVVGSE	10	32	335.19321259495064	NaN	0	335.1933288574219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSLLLVVGSE_	ENSG00000130479|ENST00000324096|MAP1S;ENST00000597681.1_1_19:17830311-17838159:+|nuORF;ENST00000601544.5_1_19:17830311-17836711:+|nuORF;MAP1S|p.P198Rfs*93|3|0.24|ENSG00000130479|chr19:17725972-17725972|C/-|frameshift_variant;MAP1S|p.R854Gfs*156|1|0.43|ENSG00000130479|chr19:17727944-17727944|C/-|frameshift_variant;MAP1S|p.S595Vfs*62|1|0.12|ENSG00000130479|chr19:17727160-17727160|C/-|frameshift_variant	21.9598887501803	0.4201028297492154	5				NaN	NaN	0	NaN	1210	2914	4119
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4136	16.972	NaN	2340.4	30	0	194.33	0.214	+			43240	TEVRQKQQL	9	59	565.3211004203467	NaN	0	565.321044921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEVRQKQQL_	ENSG00000133106|ENST00000313624|EPSTI1;EPSTI1|p.L289Sfs*24|1|0.42|ENSG00000133106|chr13:42895092-42895093|-/A|frameshift_variant;EPSTI1|p.R138Efs*5|1|0.36|ENSG00000133106|chr13:42963332-42963332|T/-|frameshift_variant;nc|ENSG00000133106|Q96J88-3|EPSTI1;nc|ENSG00000133106|Q96J88|EPSTI1	69.6276240434122	0.10825701912424071	5				NaN	NaN	0	NaN	1217	2917	4135
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4137	16.976	NaN	4685.1	30	0	1508.8	0.106			+	44656	TTGAVSGSFVR	11	48	361.1936326280123	1080.559068484237	3	361.1931457519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTGAVSGSFVR_	REV__ENST00000478000.5_1_7:944755-944842:-|nuORF	34.08650109265054	0.6322515996262609	5				NaN	NaN	0	NaN	1218	2917	4135
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4138	16.978	NaN	2945.4	30	0	788.09	0.106			+	44601	TTDMMTNLVD	10	47	570.7509480096807	1139.4873430861612	2	570.7504272460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TTDMMTNLVD_	REV__ENSG00000138078|ENST00000409411|PREPL;REV__nc|ENSG00000138078|Q4J6C6-2|PREPL;REV__nc|ENSG00000138078|Q4J6C6-3|PREPL;REV__nc|ENSG00000138078|Q4J6C6|PREPL	29.170058357718403	0.6416167986984785	5				NaN	NaN	0	NaN	1219	2917	4135
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4139	16.98	NaN	1390.7	30	0	280.27	0.106			+	-1	SVKEFCDAD	9	47	535.7237427501235	NaN	0	535.7238159179688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_SVKEFC(Carbamidomethyl (C))DAD_	REV__HGD|p.A381V|1|0.34|ENSG00000113924|chr3:120633193-120633193|G/A|missense_variant	31.529811441608018	0.3183796599642538	5				NaN	NaN	0	NaN	1220	2917	4135
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4140	16.982	NaN	1619.4	30	0	388.94	0.106	+			44477	TSRFPGRGA	9	37	474.7545273156835	947.494501698167	2	474.7537536621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TSRFPGRGA_	ENST00000582478.5_1_17:80008793-80009165:-|nuORF	37.81151784470057	0.4459294069877048	5				NaN	NaN	0	NaN	1221	2917	4135
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4141	16.983	NaN	834.94	30	0	196.27	0.042			+	-1	WECPYRRCTIG	11	27	749.339111328125	NaN	0	749.339111328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Carbamidomethyl (C)	_WEC(Carbamidomethyl (C))PYRRC(Carbamidomethyl (C))TIG_	REV__ENSG00000129566|ENST00000262715|TEP1;REV__nc|ENSG00000129566|Q99973-2|TEP1;REV__TEP1|p.K1597Sfs*14|1|0.27|ENSG00000129566|chr14:20380448-20380448|T/-|frameshift_variant;REV__TEP1|p.V1856Lfs*45|3|0.41|ENSG00000129566|chr14:20378179-20378179|C/-|frameshift_variant	14.137123925751023	0.456735970842152	5				NaN	NaN	0	NaN	1222	2917	4135
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4150	17.004	NaN	7710.4	30	0	1862.2	0.214			+	31124	QGATMTRLT	9	61	497.7522453883746	993.4899378435492	2	497.7516784667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_QGATM(Oxidation (M))TRLT_	REV__ENST00000332995.11_1_6:13283711-13286435:+|nuORF	79.71258880314673	0.09879134589249085	5				NaN	NaN	0	NaN	1228	2920	4149
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4151	17.007	NaN	1466.1	30	0	384.44	0.106	+			14359	GTACGKYYR	9	53	538.2539538393928	NaN	0	538.2542724609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GTAC(Carbamidomethyl (C))GKYYR_	ENSG00000156482|ENST00000287038|RPL30;ENST00000480085.1_1_6:114160699-114160804:+|nuORF	74.25504064058377	0.09106938647426577	5				NaN	NaN	0	NaN	1229	2920	4149
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4152	17.009	NaN	2446.9	30	0	552.1	0.106			+	13816	GQPGPPGTD	9	40	413.19138230740487	824.3682116816098	2	413.1912841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GQPGPPGTD_	REV__COL3A1|p.G786Dfs*5|1|0.33|ENSG00000168542|chr2:189001549-189001549|C/-|frameshift_variant;REV__COL3A1|p.N1405Sfs*4|1|0.06|ENSG00000168542|chr2:189010849-189010850|-/GTTCAGG|frameshift_variant;REV__CON__P04258;REV__ENSG00000168542|ENST00000304636|COL3A1;REV__nc|ENSG00000168542|P02461-2|COL3A1	21.9598887501803	0.5980208138527809	5				NaN	NaN	0	NaN	1230	2920	4149
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4153	17.011	NaN	1585.5	30	0	524.58	0.106	+			42173	SYTSGPGSR	9	40	456.2157162728297	910.4168796124594	2	456.21539306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SYTSGPGSR_	CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000550170.5_1_12:53294858-53298765:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	58.22992032128504	0.22837015374068087	5				NaN	NaN	0	NaN	1231	2920	4149
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4154	17.013	NaN	1171.8	30	0	130.36	0.106			+	-1	TREMPPLKV	9	48	543.8007289333356	1085.586904933471	2	543.7994384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_TREM(Oxidation (M))PPLKV_	REV__ENST00000474701.1_1_2:10263315-10263486:+|nuORF	39.252832667884924	0.4290233611298554	5				NaN	NaN	0	NaN	1232	2920	4149
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4155	17.015	NaN	2699.7	30	0	805.27	0.106			+	-1	VAPGRRCR	8	32	324.51478095226753	970.5225134570026	3	324.1796569824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_VAPGRRC(Carbamidomethyl (C))R_	REV__ENST00000523504.5_1_8:22880186-22926453:-|nuORF	25.450171626174864	0.7628259754767981	5				NaN	NaN	0	NaN	1233	2920	4149
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4156	17.016	NaN	1635.7	30	0	306.45	0.035	+			5090	ATSNVHMVK	9	43	493.7594764518147	985.5043999704294	2	493.7589416503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATSNVHMVK_	ENSG00000197256|ENST00000586659|KANK2;ENST00000590400.1_1_19:11303345-11305238:-|nuORF;KANK2|p.P430Rfs*5|1|0.23|ENSG00000197256|chr19:11178681-11178681|G/-|frameshift_variant;nc|ENSG00000197256|Q63ZY3-2|KANK2;nc|ENSG00000197256|Q63ZY3-3|KANK2	56.43379154798735	0.2433427591689151	5				NaN	NaN	0	NaN	1234	2920	4149
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4166	17.038	NaN	12416	30	0	1970.7	0.214	+			35159	SAIDKMTKK	9	63	511.28920385396594	NaN	0	511.289306640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAIDKMTKK_	CTNNA1|p.K493Nfs*31|1|0.19|ENSG00000044115|chr5:138917827-138917827|A/-|frameshift_variant;CTNNA1|p.T832*|1|0.29|ENSG00000044115|chr5:138933859-138933862|CAGA/-|frameshift_variant;ENSG00000044115|ENST00000302763|CTNNA1;ENST00000515849.2_1_5:114726864-114727050:-|nuORF;ENST00000517534.5_1_5:138163374-138223382:+|nuORF;nc|ENSG00000044115|P35221-2|CTNNA1	129.42129120953632	0.0006770487180932568	5				NaN	NaN	0	NaN	1241	2923	4165
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4167	17.042	NaN	5430.3	30	0	1035.6	0.106				-1	CPPCHVSV	8	60	478.2105300318781	954.4065071305562	2	478.2091979980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))PPC(Carbamidomethyl (C))HVSV_	ENSG00000143363|ENST00000271620|PRUNE1;nc|ENSG00000143363|Q86TP1-2|PRUNE1	37.028477286268924	0.6747514403204248	5				NaN	NaN	0	NaN	1242	2923	4165
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4168	17.044	NaN	4508	30	0	745.12	0.106			+	515	ACMKRIPA	8	58	481.74960105423406	961.4846491752681	2	481.74822998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_AC(Carbamidomethyl (C))M(Oxidation (M))KRIPA_	REV__ENST00000288828.8_1_7:5239256-5254189:+|nuORF	46.76643321282427	0.6143254112625767	5				NaN	NaN	0	NaN	1243	2923	4165
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4169	17.046	NaN	8207.5	30	0	2461.3	0.106	+			22779	KVFDAKPSAK	10	46	364.2141024075139	1089.6204778227418	3	364.21319580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KVFDAKPSAK_	ENSG00000143889|ENST00000449105|HNRNPLL;nc|ENSG00000143889|Q8WVV9-4|HNRNPLL;nc|ENSG00000143889|Q8WVV9-5|HNRNPLL	66.96192283764107	0.30252237217063654	5				NaN	NaN	0	NaN	1244	2923	4165
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4170	17.047	NaN	1393.2	30	0	336.72	0.037				-1	 	0	33	379.2333877125111	1134.6783337377333	3	379.2328186035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1245	2923	4165
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4184	17.077	NaN	4684.6	30	0	770.88	0.214				-1	EKSDMDYL	8	63	508.71473724443473	1015.4149215556695	2	508.7140808105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_EKSDM(Oxidation (M))DYL_	nc|ENSG00000197364|Q5SY68|S100A7L2	47.91560031466742	0.6071945918984287	5				NaN	NaN	0	NaN	1256	2926	4183
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4185	17.081	NaN	1469.5	30	0	142.04	0.106			+	34373	RTRGPTGSPL	10	61	521.2941222739582	NaN	0	521.2941284179688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RTRGPTGSPL_	REV__ENST00000474451.5_1_20:3215527-3219798:-|nuORF	58.2462437865262	0.2485996375737153	5				NaN	NaN	0	NaN	1257	2926	4183
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4186	17.083	NaN	1278.2	30	0	286.26	0.106	+			9957	ERDTKEAIAN	10	42	573.7908530356763	NaN	0	573.8075561523438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ERDTKEAIAN_	ENSG00000133028|ENST00000255390|SCO1	26.063383197487333	0.4145965855542893	5				NaN	NaN	0	NaN	1258	2926	4183
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4187	17.085	NaN	820.41	30	0	218.89	0.106				-1	ASSSEKVRC	9	27	341.8356628417969	NaN	0	341.8356628417969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_ASSSEKVRC(Carbamidomethyl (C))_	ENST00000487169.5_1_2:242169181-242169382:-|nuORF	31.529811441608018	0.3183796599642538	5				NaN	NaN	0	NaN	1259	2926	4183
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4188	17.086	NaN	2654.4	30	0	239.35	0.106	+			42452	TAMAAAKAPTK	11	53	530.7944730244311	1059.5743931156621	2	531.296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TAMAAAKAPTK_	ENSG00000114391|ENST00000394077|RPL24	89.35639160576558	0.1014093944095153	5				NaN	NaN	0	NaN	1260	2926	4183
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4189	17.088	NaN	1685.4	30	0	463.04	0.036	+			42453	TAMAAAKAPTK	11	36	354.1989726624692	NaN	0	354.19873046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TAMAAAKAPTK_	ENSG00000114391|ENST00000394077|RPL24	39.873155843976775	0.387718248623866	5				NaN	NaN	0	NaN	1261	2926	4183
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4190	17.089	NaN	887.02	30	0	277.04	0.137			+	12208	GARCVGNP	8	25	387.1903993885884	772.3662458439768	2	387.18927001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GARCVGNP_	REV__ENSG00000213672|ENST00000294129|NCKIPSD;REV__nc|ENSG00000213672|Q9NZQ3-2|NCKIPSD;REV__nc|ENSG00000213672|Q9NZQ3-3|NCKIPSD;REV__nc|ENSG00000213672|Q9NZQ3-4|NCKIPSD;REV__nc|ENSG00000213672|Q9NZQ3-5|NCKIPSD	28.2542754592877	0.7411748056684583	5				NaN	NaN	0	NaN	1262	2926	4183
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4199	17.11	NaN	20800	30	0	3724.5	0.214				-1	 	0	70	466.2828044853691	930.5510560375383	2	466.28204345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1268	2929	4198
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4200	17.114	NaN	1659.3	30	0	155.92	0.035	+			49246	VVNPKYEGK	9	53	517.2879128034587	NaN	0	517.2872924804688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVNPKYEGK_	ENSG00000150093|ENST00000302278|ITGB1	56.43379154798735	0.16452882468284893	5				NaN	NaN	0	NaN	1269	2929	4198
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4208	17.132	NaN	3484.2	30	0	454.74	0.214	+			35013	SACHKYFEK	9	64	585.2752166457847	1168.5358803583692	2	585.2747192382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SAC(Carbamidomethyl (C))HKYFEK_	ENSG00000163993|ENST00000296370|S100P;ENST00000513778.1_1_4:6695618-6698766:+|nuORF;S100P|p.T82M|1|0.3|ENSG00000163993|chr4:6696999-6696999|C/T|missense_variant	63.53385203322761	0.18415635464017938	5				NaN	NaN	0	NaN	1274	2932	4207
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4209	17.136	NaN	2509.6	30	0	765.91	0.106			+	1563	AGGKVVSK	8	47	373.2325430077895	744.450533082379	2	373.23175048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AGGKVVSK_	REV__ENSG00000130396|ENST00000683244|AFDN;REV__nc|ENSG00000130396|P55196-1|AFDN;REV__nc|ENSG00000130396|P55196-2|AFDN;REV__nc|ENSG00000130396|P55196-3|AFDN;REV__nc|ENSG00000130396|P55196-5|AFDN;REV__nc|ENSG00000130396|P55196-6|AFDN;REV__nc|ENSG00000130396|P55196|AFDN	55.50420428727701	0.5462892107279674	5				NaN	NaN	0	NaN	1275	2932	4207
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4210	17.138	NaN	1063.1	30	0	225.63	0.106			+	38370	SRRSPPLL	8	40	463.28235910825435	NaN	0	463.28271484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SRRSPPLL_	REV__ENST00000390548.6_1_14:106202774-106203071:-|nuORF	45.9519527083369	1.7418937515398478	5				NaN	NaN	0	NaN	1276	2932	4207
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4211	17.14	NaN	1216	30	0	159.72	0.106			+	29926	PLTSMMLK	8	43	460.7508239746094	NaN	0	460.7508239746094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PLTSMMLK_	REV__ENSG00000101057|ENST00000217026|MYBL2;REV__nc|ENSG00000101057|P10244-2|MYBL2	38.80614096846853	1.7418937515398478	5				NaN	NaN	0	NaN	1277	2932	4207
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4212	17.142	NaN	1934.9	30	0	779.66	0.106				-1	 	0	37	332.1947899059139	993.5625403179417	3	332.1940612792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1278	2932	4207
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4213	17.143	NaN	1831.9	30	0	408.18	0.106			+	-1	VVLARMCGK	9	41	345.19403076171875	NaN	0	345.19403076171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_VVLARMC(Carbamidomethyl (C))GK_	REV__APC|p.A531V|1|0.3|ENSG00000134982|chr5:112827972-112827972|C/T|missense_variant	35.61828744233558	0.29773779453147337	5				NaN	NaN	0	NaN	1279	2932	4207
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4214	17.145	NaN	1746.3	30	0	346.74	0.036	+			20169	KEKTEQETL	9	58	553.291623993749	NaN	0	553.291015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KEKTEQETL_	ENSG00000076382|ENST00000321765|SPAG5;ENSG00000258472|ENST00000531839|unknown;ENST00000577259.1_1_17:26907024-26910624:-|nuORF	85.86182877749512	0.05129763505578642	5				NaN	NaN	0	NaN	1280	2932	4207
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4226	17.17	NaN	3915	30	0	447.84	0.214			+	-1	RLVHCDTE	8	47	515.2437622994945	1028.472971665789	2	515.2430419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_RLVHC(Carbamidomethyl (C))DTE_	REV__ENSG00000090512|ENST00000265029|FETUB;REV__FETUB|p.K146Dfs*7|1|0.23|ENSG00000090512|chr3:186644755-186644756|AA/-|frameshift_variant;REV__FETUB|p.K146Rfs*4|1|0.53|ENSG00000090512|chr3:186644755-186644755|A/-|frameshift_variant;REV__FETUB|p.K318Rfs*13|1|0.35|ENSG00000090512|chr3:186652432-186652432|A/-|frameshift_variant	26.79610172149135	0.7524337208463756	5				NaN	NaN	0	NaN	1289	2935	4225
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4227	17.174	NaN	3599.3	30	0	1503	0.106			+	22180	KSSSLFATI	9	53	477.2707207463973	952.5268885595946	2	477.2684326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KSSSLFATI_	REV__ENSG00000135763|ENST00000258243|URB2	37.15910966729921	0.4535818937225704	5				NaN	NaN	0	NaN	1290	2935	4225
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4228	17.176	NaN	2051.3	30	0	746.73	0.106			+	21618	KPPKTEYD	8	55	489.2518579712359	976.4891630092718	2	489.25054931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KPPKTEYD_	REV__ENSG00000149474|ENST00000688188|KAT14;REV__nc|ENSG00000149474|Q9H8E8-2|KAT14;REV__nc|ENSG00000149474|Q9H8E8|KAT14	45.9519527083369	0.6193794311207887	5				NaN	NaN	0	NaN	1291	2935	4225
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4229	17.178	NaN	3379.5	30	0	598.05	0.034			+	24634	LGSRASPGPAG	11	58	485.25581638488035	NaN	0	485.2556457519531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LGSRASPGPAG_	REV__ENST00000315127.8_2_15:74967332-74988282:-|nuORF	37.81151784470057	0.3969060959064013	5				NaN	NaN	0	NaN	1292	2935	4225
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4235	17.194	NaN	7012.5	30	0	2091.8	0.214				-1	 	0	52	453.74913623197097	905.483719530742	2	453.7479248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1295	2938	4234
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4236	17.197	NaN	3369.3	30	0	614.25	0.106				-1	 	0	69	497.788611195877	993.5626694585541	2	497.7874450683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1296	2938	4234
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4237	17.199	NaN	4533.6	30	0	779.22	0.106			+	-1	RPVTMPLKR	9	52	371.89074454426964	1112.6504042330089	3	371.8901672363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_RPVTM(Oxidation (M))PLKR_	REV__ENST00000318121.7_1_1:36230063-36230255:-|nuORF	35.15202426646627	0.4747332964206883	5				NaN	NaN	0	NaN	1297	2938	4234
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4238	17.201	NaN	3193.3	30	0	1129.5	0.106	+			14692	GTIGKKFAR	9	45	326.5351349518737	976.5835754558211	3	326.5345458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTIGKKFAR_	ENSG00000135698|ENST00000258169|MPHOSPH6	35.15202426646627	0.4747332964206883	5				NaN	NaN	0	NaN	1298	2938	4234
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4239	17.203	NaN	1710.2	30	0	251.21	0.106	+			20746	KGVKAVDPK	9	49	471.2922668457031	NaN	0	471.2922668457031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KGVKAVDPK_	ENSG00000182199|ENST00000328923|SHMT2;ENST00000553837.5_1_12:57625333-57628141:+|nuORF;ENST00000554467.5_1_12:57626939-57627538:+|nuORF;ENST00000555774.5_1_12:57624752-57628141:+|nuORF;ENST00000556825.5_1_12:57623475-57628141:+|nuORF;ENST00000557348.5_1_12:57623887-57628141:+|nuORF;ENST00000557433.5_1_12:57625333-57628141:+|nuORF;nc|ENSG00000182199|P34897-2|SHMT2;nc|ENSG00000182199|P34897-3|SHMT2;SHMT2|p.H328Tfs*8|1|0.54|ENSG00000182199|chr12:57233300-57233300|C/-|frameshift_variant	40.77816245573522	0.2702456086868081	5				NaN	NaN	0	NaN	1299	2938	4234
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4240	17.205	NaN	2121	30	0	752.96	0.106	+			40376	STTTTQITK	9	41	490.76744451346985	979.5203360937397	2	490.7662658691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STTTTQITK_	ENSG00000159023|ENST00000343067|EPB41;ENST00000462032.1_1_1:29424324-29436027:+|nuORF;nc|ENSG00000159023|P11171-2|EPB41;nc|ENSG00000159023|P11171-3|EPB41;nc|ENSG00000159023|P11171-5|EPB41;nc|ENSG00000159023|P11171-6|EPB41	42.86426827375447	0.38666266728046506	5				NaN	NaN	0	NaN	1300	2938	4234
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4241	17.206	NaN	1379.6	30	0	245.58	0.035				-1	ETLICIVVT	9	56	524.292236328125	NaN	0	524.292236328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_ETLIC(Carbamidomethyl (C))IVVT_	ANXA13|p.R270C|1|0.59|ENSG00000104537|chr8:123684633-123684633|G/A|missense_variant	45.9519527083369	0.2345902329052062	5				NaN	NaN	0	NaN	1301	2938	4234
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4254	17.234	NaN	7058	30	0	1015.5	0.214			+	32174	QSSATLKMR	9	66	519.2734752245816	1036.532397515963	2	519.2727661132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_QSSATLKM(Oxidation (M))R_	REV__ENSG00000283428|ENST00000638102|CCDC195	93.19546047674547	0.05585629608842056	5				NaN	NaN	0	NaN	1311	2941	4253
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4255	17.237	NaN	2587.7	30	0	497.73	0.106	+			46827	VIDSVTKKR	9	49	523.3223334672521	NaN	0	523.3223876953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VIDSVTKKR_	ENSG00000151835|ENST00000382292|SACS;nc|ENSG00000151835|Q9NZJ4-2|SACS;SACS|p.I3485Lfs*10|1|0.24|ENSG00000151835|chr13:23333423-23333423|T/-|frameshift_variant;SACS|p.K2931Nfs*22|1|0.23|ENSG00000151835|chr13:23335083-23335083|T/-|frameshift_variant;SACS|p.L2871Ffs*29|1|0.26|ENSG00000151835|chr13:23335263-23335264|-/A|frameshift_variant;SACS|p.L3102*|1|0.33|ENSG00000151835|chr13:23334571-23334571|A/-|frameshift_variant;SACS|p.S4423Ffs*42|1|0.18|ENSG00000151835|chr13:23330610-23330611|-/G|frameshift_variant	51.33545320467046	0.19748963086191895	5				NaN	NaN	0	NaN	1312	2941	4253
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4256	17.239	NaN	4794.7	30	0	1968.8	0.106	+			21571	KPEPSFSEY	9	61	542.2528952595178	1082.4912375858355	2	542.2522583007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KPEPSFSEY_	ENSG00000198053|ENST00000358771|SIRPA;nc|ENSG00000198053|P78324-2|SIRPA;nc|ENSG00000198053|P78324-4|SIRPA	63.30626980617807	0.18605348971131092	5				NaN	NaN	0	NaN	1313	2941	4253
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4257	17.241	NaN	3384	30	0	416.72	0.106	+			5949	AVLKHIENK	9	65	526.3177719039198	1050.6209908746396	2	526.3169555664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVLKHIENK_	ENSG00000160695|ENST00000621676|VPS11;nc|ENSG00000160695|Q9H270|VPS11	109.47833844074708	0.029530294723441826	5				NaN	NaN	0	NaN	1314	2941	4253
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4258	17.243	NaN	1285.5	30	0	266.32	0.106				-1	 	0	46	400.71416485456007	799.4137767759202	2	400.71331787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1315	2941	4253
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4259	17.245	NaN	3469.5	30	0	1096.5	0.036	+			5950	AVLKHIENK	9	54	351.21340780432007	NaN	0	351.2135009765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AVLKHIENK_	ENSG00000160695|ENST00000621676|VPS11;nc|ENSG00000160695|Q9H270|VPS11	118.74307786436346	0.002324367518139777	5				NaN	NaN	0	NaN	1316	2941	4253
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4260	17.245	NaN	2142.8	30	0	993.98	0.141	+			31568	QLPFAKTRK	9	44	544.8336990508833	1087.6528451685665	2	544.8323364257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QLPFAKTRK_	ENST00000272163.8_1_1:225590912-225591005:-|nuORF	28.081489160057373	0.5408112046645406	5				NaN	NaN	0	NaN	1317	2941	4253
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4273	17.275	NaN	2914.7	30	0	422.89	0.214				-1	 	0	51	461.26222735087555	920.5099017685511	2	461.26104736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1327	2944	4272
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4274	17.279	NaN	7343.4	30	0	2555.8	0.106	+			23764	LCGQPFWI	8	76	482.2419494543925	962.469345975585	2	482.2403869628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LCGQPFWI_	ENST00000427574.6_1_11:76156149-76164398:+|nuORF	57.452649787351945	0.526999880452039	5				NaN	NaN	0	NaN	1328	2944	4272
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4275	17.281	NaN	2251.2	30	0	419.44	0.106	+			2701	AQQKFKINK	9	58	552.8311905130327	1103.6478280928652	2	552.8303833007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AQQKFKINK_	ENSG00000128708|ENST00000264108|HAT1;ENST00000457761.6_1_2:172821936-172844354:+|nuORF;nc|ENSG00000128708|O14929-2|HAT1	104.0567914643314	0.03506238181059741	5				NaN	NaN	0	NaN	1329	2944	4272
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4276	17.282	NaN	3042.8	30	0	477.03	0.106			+	30979	QEQVKKLKV	9	56	550.3464327669844	1098.6783126007688	2	550.3458862304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QEQVKKLKV_	REV__ENSG00000204991|ENST00000378247|SPIRE2;REV__ENST00000561883.1_1_16:89920747-89922226:+|nuORF;REV__ENST00000569108.5_1_16:89916567-89936677:+|nuORF;REV__nc|ENSG00000204991|Q8WWL2-2|SPIRE2;REV__nc|ENSG00000204991|Q8WWL2-3|SPIRE2;REV__nc|ENSG00000204991|Q8WWL2-4|SPIRE2	62.107414245175825	0.1960472003779324	5				NaN	NaN	0	NaN	1330	2944	4272
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4277	17.284	NaN	1915.2	30	0	340.97	0.106				-1	 	0	49	485.7672157650745	969.5198785969491	2	485.7661437988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1331	2944	4272
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4278	17.286	NaN	942.59	30	0	191.13	0.106			+	12296	GCKTMRPSKQ	10	55	568.2898288623767	1134.5651047915533	2	568.7908935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GCKTMRPSKQ_	REV__GRIK2|p.F694Sfs*16|1|0.22|ENSG00000164418|chr6:101928623-101928623|T/-|frameshift_variant	42.33807565288922	0.5276008846745733	5				NaN	NaN	0	NaN	1332	2944	4272
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4279	17.288	NaN	2972.8	30	0	513.34	0.037				-1	SLRVLRLTM	9	47	368.88984348148625	1103.6477010446588	3	369.223388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_SLRVLRLTM(Oxidation (M))_	ENST00000568684.1_1_16:69959324-69963386:+|nuORF	29.170058357718403	0.5306379469863586	5				NaN	NaN	0	NaN	1333	2944	4272
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4289	17.31	NaN	8758.6	30	0	1545.4	0.214	+			14462	GTCASWRGK	9	73	511.74640955124903	1021.4782661692981	2	511.74566650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GTC(Carbamidomethyl (C))ASWRGK_	ENSG00000265972|ENST00000582401|TXNIP;ENST00000488537.1_1_1:145440216-145440639:+|nuORF;nc|ENSG00000265972|Q9H3M7-2|TXNIP	101.25262130126117	0.03792372629710479	5				NaN	NaN	0	NaN	1340	2947	4288
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4290	17.313	NaN	4884.8	30	0	593.72	0.106	+			45248	TVQEKTFNK	9	69	547.7968785839846	1093.5792042347691	2	547.7959594726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVQEKTFNK_	ENSG00000163104|ENST00000354268|SMARCAD1;nc|ENSG00000163104|Q9H4L7-2|SMARCAD1;SMARCAD1|p.K230Rfs*28|1|0.26|ENSG00000163104|chr4:94240985-94240985|A/-|frameshift_variant;SMARCAD1|p.K734Qfs*6|1|0.31|ENSG00000163104|chr4:94278630-94278631|-/C|frameshift_variant	120.30596017624542	0.02101454110788768	5				NaN	NaN	0	NaN	1341	2947	4288
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4291	17.315	NaN	1504.3	30	0	92.775	0.106			+	23944	LDQPIGANNI	10	56	527.7807006835938	NaN	0	527.7807006835938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LDQPIGANNI_	REV__ENSG00000126500|ENST00000682287|FLRT1;REV__nc|ENSG00000126500|Q9NZU1-1|FLRT1	65.46538089061403	0.18964705739380194	5				NaN	NaN	0	NaN	1342	2947	4288
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4292	17.317	NaN	2026.8	30	0	548.89	0.106			+	36706	SGSISDGLK	9	33	432.2269319867276	NaN	0	432.2271423339844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SGSISDGLK_	REV__ENST00000381052.8_1_5:64593037-64747992:-|nuORF;REV__nc|ENSG00000049192|Q9UKP5-3|ADAMTS6	32.81241826257853	0.3119040447479903	5				NaN	NaN	0	NaN	1343	2947	4288
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4293	17.319	NaN	1400.8	30	0	374.38	0.106	+			48346	VTGKLSSKE	9	51	474.7716979980469	NaN	0	474.7716979980469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTGKLSSKE_	ENSG00000175073|ENST00000310421|VCPIP1;VCPIP1|p.K1108Nfs*37|1|0.15|ENSG00000175073|chr8:66634846-66634846|T/-|frameshift_variant	45.97224482568171	0.23445038899310136	5				NaN	NaN	0	NaN	1344	2947	4288
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4294	17.321	NaN	2824.9	30	0	770.02	0.035				-1	 	0	56	503.78871571678025	1005.5628785003605	2	503.7877502441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1345	2947	4288
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4295	17.321	NaN	2319.9	30	0	353.61	0.14	+			49005	VVGPELHHK	9	56	508.28902604263453	1014.5634991520691	2	508.2879638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VVGPELHHK_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	54.776311868738084	0.25715957988447635	5				NaN	NaN	0	NaN	1346	2947	4288
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4303	17.342	NaN	14998	30	0	2475.5	0.214				-1	 	0	73	502.2937852905529	1002.5730176479058	2	502.2926025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1351	2950	4302
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4304	17.345	NaN	4382	30	0	606.28	0.106				-1	AEGAAESCGSR	11	67	547.7300811307531	1093.445609328306	2	547.7288818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_AEGAAESC(Carbamidomethyl (C))GSR_	ENST00000376499.7_2_9:84303668-84303953:-|nuORF	35.15202426646627	0.6210751305041943	5				NaN	NaN	0	NaN	1352	2950	4302
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4305	17.347	NaN	2995.1	30	0	628.87	0.106				-1	 	0	40	324.2030363240561	646.3915197149122	2	324.2023620605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1353	2950	4302
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4306	17.349	NaN	1242.3	30	0	195.83	0.106	+			47532	VQSGHVNLK	9	49	491.277425438989	NaN	0	491.27752685546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VQSGHVNLK_	ENSG00000178913|ENST00000313368|TAF7	67.49366992349736	0.1173583512313808	5				NaN	NaN	0	NaN	1354	2950	4302
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4307	17.351	NaN	1033.4	30	0	181.22	0.106	+			39260	STANTYSYHK	10	46	586.2727661132812	NaN	0	586.2727661132812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STANTYSYHK_	ENSG00000161999|ENST00000609261|JMJD8;ENST00000565302.5_1_16:732919-733769:-|nuORF;ENST00000568689.5_1_16:733170-734340:-|nuORF;ENST00000569441.5_1_16:733170-733950:-|nuORF;nc|ENSG00000161999|Q96S16-2|JMJD8	33.921630207806714	0.38879399011744475	5				NaN	NaN	0	NaN	1355	2950	4302
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4308	17.353	NaN	1772	30	0	680.36	0.035			+	43563	TIAAPPGRPR	10	43	518.3076861114151	1034.6008192896302	2	518.3070068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TIAAPPGRPR_	REV__ENST00000551050.6_2_12:42866355-42876857:-|nuORF	29.14955571784316	0.6417842315402807	5				NaN	NaN	0	NaN	1356	2950	4302
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4309	17.353	NaN	1213.9	30	0	565.44	0.141			+	30310	PTNREPLKL	9	35	534.3141532058766	1066.613753478553	2	534.3135986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PTNREPLKL_	REV__ENSG00000112769|ENST00000230538|LAMA4;REV__ENST00000604740.5_1_6:112443215-112450276:-|nuORF;REV__LAMA4|p.A1443V|1|0.24|ENSG00000112769|chr6:112122161-112122161|G/A|missense_variant;REV__nc|ENSG00000112769|Q16363-2|LAMA4;REV__nc|ENSG00000112769|Q16363|LAMA4	20.94693142431847	0.6074874384046576	5				NaN	NaN	0	NaN	1357	2950	4302
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4323	17.384	NaN	1914.8	30	0	325.9	0.213	+			44798	TTQRPLHINK	10	57	604.350427833097	1206.686302732994	2	604.3492431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTQRPLHINK_	CACNA1C|p.A2072Pfs*18|1|0.55|ENSG00000151067|chr12:2688729-2688729|G/-|frameshift_variant;CACNA1C|p.P2073Qfs*17|1|0.21|ENSG00000151067|chr12:2688733-2688733|C/-|frameshift_variant;ENSG00000151067|ENST00000399655|CACNA1C;nc|ENSG00000151067|Q13936-10|CACNA1C;nc|ENSG00000151067|Q13936-11|CACNA1C;nc|ENSG00000151067|Q13936-13|CACNA1C;nc|ENSG00000151067|Q13936-14|CACNA1C;nc|ENSG00000151067|Q13936-15|CACNA1C;nc|ENSG00000151067|Q13936-16|CACNA1C;nc|ENSG00000151067|Q13936-17|CACNA1C;nc|ENSG00000151067|Q13936-18|CACNA1C;nc|ENSG00000151067|Q13936-19|CACNA1C;nc|ENSG00000151067|Q13936-2|CACNA1C;nc|ENSG00000151067|Q13936-20|CACNA1C;nc|ENSG00000151067|Q13936-21|CACNA1C;nc|ENSG00000151067|Q13936-22|CACNA1C;nc|ENSG00000151067|Q13936-23|CACNA1C;nc|ENSG00000151067|Q13936-24|CACNA1C;nc|ENSG00000151067|Q13936-25|CACNA1C;nc|ENSG00000151067|Q13936-26|CACNA1C;nc|ENSG00000151067|Q13936-27|CACNA1C;nc|ENSG00000151067|Q13936-28|CACNA1C;nc|ENSG00000151067|Q13936-29|CACNA1C;nc|ENSG00000151067|Q13936-3|CACNA1C;nc|ENSG00000151067|Q13936-30|CACNA1C;nc|ENSG00000151067|Q13936-31|CACNA1C;nc|ENSG00000151067|Q13936-32|CACNA1C;nc|ENSG00000151067|Q13936-33|CACNA1C;nc|ENSG00000151067|Q13936-34|CACNA1C;nc|ENSG00000151067|Q13936-35|CACNA1C;nc|ENSG00000151067|Q13936-36|CACNA1C;nc|ENSG00000151067|Q13936-37|CACNA1C;nc|ENSG00000151067|Q13936-4|CACNA1C;nc|ENSG00000151067|Q13936-5|CACNA1C;nc|ENSG00000151067|Q13936-6|CACNA1C;nc|ENSG00000151067|Q13936-7|CACNA1C;nc|ENSG00000151067|Q13936-8|CACNA1C;nc|ENSG00000151067|Q13936-9|CACNA1C;nc|ENSG00000151067|Q13936|CACNA1C	73.84112541714126	0.2459384371494077	5				NaN	NaN	0	NaN	1368	2953	4322
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4324	17.388	NaN	2017.7	30	0	173.88	0.106			+	47642	VSATGTKRGL	10	58	495.2907737157958	NaN	0	495.2908020019531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSATGTKRGL_	REV__ENSG00000180182|ENST00000324817|MED14;REV__MED14|p.S625Lfs*16|1|0.05|ENSG00000180182|chrX:40692290-40692291|-/ACAG|frameshift_variant	49.44154591367651	0.30913310806145605	5				NaN	NaN	0	NaN	1369	2953	4322
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4325	17.39	NaN	2897.2	30	0	1303.8	0.106	+			29589	PFPALTGSLPK	11	50	564.32837492351	1126.6421969138198	2	564.8291625976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PFPALTGSLPK_	ENST00000535075.1_1_11:72465944-72466832:-|nuORF	30.317721548370564	0.6717830234747728	5				NaN	NaN	0	NaN	1370	2953	4322
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4326	17.391	NaN	856.07	30	0	152.13	0.106	+			26834	LVTQNHSL	8	35	456.2510681152344	NaN	0	456.2510681152344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LVTQNHSL_	CCDC18|p.N601Kfs*13|1|0.35|ENSG00000122483|chr1:93216715-93216716|-/A|frameshift_variant;CCDC18|p.R233Kfs*3|1|0.07|ENSG00000122483|chr1:93193738-93193739|-/A|frameshift_variant;CCDC18|p.V259Wfs*15|1|0.43|ENSG00000122483|chr1:93201959-93201959|A/-|frameshift_variant;ENSG00000122483|ENST00000690025|CCDC18;nc|ENSG00000122483|Q5T9S5-2|CCDC18;nc|ENSG00000122483|Q5T9S5|CCDC18	40.5726180659479	1.7418937515398478	5				NaN	NaN	0	NaN	1371	2953	4322
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4327	17.393	NaN	1290	30	0	251.9	0.034			+	41019	SVGTLVHVGA	10	46	470.2665100097656	NaN	0	470.2665100097656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVGTLVHVGA_	REV__ENST00000496704.1_1_2:130899553-130900555:-|nuORF	42.396135135203025	0.3536752194735987	5				NaN	NaN	0	NaN	1372	2953	4322
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4338	17.417	NaN	7472.8	30	0	1053.8	0.214	+			15799	GVVMLVIPATQ	11	49	376.5546102198208	1126.6420012596625	3	376.88818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVVMLVIPATQ_	AluJb_dup73373|chr10:75217950-75218104:+|1.6276795936902488|0.000524734054382|11.6|477.0|1|1|sense;ENST00000468285.1_1_10:76973815-76980729:+|nuORF	22.561587123415745	0.7531385481947795	5				NaN	NaN	0	NaN	1380	2956	4337
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4339	17.421	NaN	3147.2	30	0	741.64	0.106				-1	 	0	55	401.2279483332798	800.4413437333596	2	401.2270812988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1381	2956	4337
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4340	17.422	NaN	1361.5	30	0	206.88	0.038				-1	CLDKINVLHK	10	45	620.345003769341	NaN	0	620.3449096679688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_C(Carbamidomethyl (C))LDKINVLHK_	ENSG00000147162|ENST00000373719|OGT;nc|ENSG00000147162|O15294-2|OGT;nc|ENSG00000147162|O15294-3|OGT;nc|ENSG00000147162|O15294-4|OGT	36.446750945000026	0.3805027428805705	5				NaN	NaN	0	NaN	1382	2956	4337
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4351	17.446	NaN	3754.7	30	0	935.69	0.214				-1	 	0	58	464.7836323212716	927.5527117093433	2	464.782470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1390	2959	4350
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4352	17.45	NaN	4292.7	30	0	621.45	0.106			+	-1	RACGRAGRA	9	60	487.75593610188446	973.4973192705689	2	487.7543029785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_RAC(Carbamidomethyl (C))GRAGRA_	REV__ENST00000446848.6_1_7:26331515-26331632:+|nuORF	60.97194046774394	0.20551255781574032	5				NaN	NaN	0	NaN	1391	2959	4350
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4353	17.452	NaN	1286.9	30	0	354.18	0.106			+	24119	LEKRWVQL	8	42	536.318287573383	NaN	0	536.318359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LEKRWVQL_	REV__ENSG00000119509|ENST00000262457|INVS;REV__nc|ENSG00000119509|Q9Y283-2|INVS	23.04248740728303	1.7418937515398478	5				NaN	NaN	0	NaN	1392	2959	4350
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4354	17.454	NaN	1473.8	30	0	227	0.032				-1	 	0	41	411.21237344998036	820.4101939667607	2	411.2115478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1393	2959	4350
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4363	17.474	NaN	1771.7	30	0	251.16	0.214				-1	 	0	49	466.2828044853691	930.5510560375383	2	466.2822570800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1399	2962	4362
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4364	17.477	NaN	2982.3	30	0	287.52	0.106	+			48792	VTYTPALP	8	52	431.2390478066576	860.4635426801152	2	431.237548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTYTPALP_	ENSG00000172927|ENST00000441339|MYEOV	42.47446043378293	0.6409579893742323	5				NaN	NaN	0	NaN	1400	2962	4362
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4365	17.479	NaN	1937.9	30	0	226.92	0.106	+			44437	TSLWQSLK	8	56	481.76866496186597	961.522776990532	2	481.76708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TSLWQSLK_	NASP|p.T160Qfs*29|1|0.25|ENSG00000132780|chr1:45607383-45607383|A/-|frameshift_variant	44.116797842482775	0.6307669463330267	5				NaN	NaN	0	NaN	1401	2962	4362
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4366	17.481	NaN	1033.2	30	0	172.08	0.106	+			31524	QLISATEKT	9	44	495.77850160972093	989.5424502862419	2	495.7771301269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QLISATEKT_	tr|U7T027|U7T027_FUSNUChaperoneproteinDnaKOS=FusobacteriumnucleatumCTI-5OX=1316586GN=dnaKPE=2SV=1	79.71258880314673	0.09879134589249085	5				NaN	NaN	0	NaN	1402	2962	4362
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4367	17.483	NaN	2260.4	30	0	371.81	0.106			+	26767	LVQFGVIAVL	10	51	529.8334559172764	1057.6523589013527	2	529.8330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LVQFGVIAVL_	REV__ENSG00000198113|ENST00000357503|TOR4A	45.97224482568171	0.49411383603842696	5				NaN	NaN	0	NaN	1403	2962	4362
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4368	17.485	NaN	918.05	30	0	124.71	0.106			+	-1	LCCTRAAL	8	44	454.2278747558594	NaN	0	454.2278747558594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_LCC(Carbamidomethyl (C))TRAAL_	REV__ENSG00000110756|ENST00000349215|HPS5;REV__nc|ENSG00000110756|Q9UPZ3-2|HPS5	53.351449002276354	1.7418937515398478	5				NaN	NaN	0	NaN	1404	2962	4362
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4369	17.486	NaN	3337	30	0	871.14	0.036	+			43045	TELAQKKKI	9	42	353.55743408203125	NaN	0	353.55743408203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TELAQKKKI_	nc|ENSG00000122432|Q5VX52|SPATA1	44.377184641726394	0.24544280798894275	5				NaN	NaN	0	NaN	1405	2962	4362
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4378	17.507	NaN	8415.1	30	0	3081.1	0.214	+			30111	PRLLWAPK	8	63	490.80512374643985	979.5956945596797	2	490.8039245605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PRLLWAPK_	ENSG00000184389|ENST00000442999|A3GALT2	71.29570347882199	0.39610197767395533	5				NaN	NaN	0	NaN	1411	2965	4377
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4379	17.51	NaN	10569	30	0	3273.5	0.106			+	9574	ELHKLRKG	8	37	327.5382897486539	NaN	0	327.5382995605469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ELHKLRKG_	REV__MCM3AP|p.E1948K|1|0.25|ENSG00000160294|chr21:46235369-46235369|C/T|missense_variant	13.775330524044264	1.7418937515398478	5				NaN	NaN	0	NaN	1412	2965	4377
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4380	17.512	NaN	5806	30	0	2510.6	0.106			+	37230	SKPGVPFEKP	10	49	362.5375607091636	1084.5908527276908	3	362.5367431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SKPGVPFEKP_	REV__ENST00000487863.5_1_19:53056575-53056806:+|nuORF	25.57405402267927	0.6709832231498071	5				NaN	NaN	0	NaN	1413	2965	4377
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4381	17.514	NaN	1253.2	30	0	87.373	0.106	+			10263	ETLMEQAVAAV	11	53	581.291759146832	NaN	0	581.2915649414062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ETLMEQAVAAV_	ENSG00000108771|ENST00000251642|DHX58;ENST00000586522.5_1_17:40255624-40263910:-|nuORF	61.691277971877994	0.21660473939634675	5				NaN	NaN	0	NaN	1414	2965	4377
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4382	17.516	NaN	1490.6	30	0	296.93	0.106			+	7612	DKEFKYKK	8	49	543.3020615481123	NaN	0	543.3016357421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DKEFKYKK_	REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-10|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-13|TTN;REV__nc|ENSG00000155657|Q8WZ42-2|TTN;REV__nc|ENSG00000155657|Q8WZ42-3|TTN;REV__nc|ENSG00000155657|Q8WZ42-4|TTN;REV__nc|ENSG00000155657|Q8WZ42-5|TTN;REV__nc|ENSG00000155657|Q8WZ42-7|TTN;REV__nc|ENSG00000155657|Q8WZ42-8|TTN;REV__nc|ENSG00000155657|Q8WZ42-9|TTN;REV__nc|ENSG00000155657|Q8WZ42|TTN;REV__TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;REV__TTN|p.D20259Rfs*40|1|0.44|ENSG00000155657|chr2:178583105-178583106|-/T|frameshift_variant;REV__TTN|p.D21555Ifs*6|1|0.33|ENSG00000155657|chr2:178576659-178576659|G/-|frameshift_variant;REV__TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;REV__TTN|p.E15132Sfs*22|1|0.27|ENSG00000155657|chr2:178612094-178612094|C/-|frameshift_variant;REV__TTN|p.E20392Dfs*6|1|0.04|ENSG00000155657|chr2:178582357-178582358|-/TTTAAAATTA|frameshift_variant;REV__TTN|p.E20392Kfs*4|1|0.02|ENSG00000155657|chr2:178582359-178582360|-/TTTT|frameshift_variant;REV__TTN|p.F18705Lfs*8|1|0.37|ENSG00000155657|chr2:178590687-178590687|A/-|frameshift_variant;REV__TTN|p.G14712Dfs*11|1|0.37|ENSG00000155657|chr2:178614341-178614341|G/-|frameshift_variant;REV__TTN|p.G19920Afs*12|1|0.42|ENSG00000155657|chr2:178584961-178584961|G/-|frameshift_variant;REV__TTN|p.G22029Efs*22|2|0.13|ENSG00000155657|chr2:178575125-178575125|T/-|frameshift_variant;REV__TTN|p.I24998Nfs*2|1|0.35|ENSG00000155657|chr2:178566216-178566217|-/T|frameshift_variant;REV__TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;REV__TTN|p.K14271Qfs*5|1|0.02|ENSG00000155657|chr2:178617351-178617352|-/G|frameshift_variant;REV__TTN|p.K26626Nfs*34|1|0.34|ENSG00000155657|chr2:178561331-178561331|T/-|frameshift_variant;REV__TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;REV__TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;REV__TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant;REV__TTN|p.N15496Ifs*16|1|0.09|ENSG00000155657|chr2:178610116-178610116|T/-|frameshift_variant;REV__TTN|p.P16126Rfs*3|1|0.25|ENSG00000155657|chr2:178607301-178607302|TG/-|frameshift_variant;REV__TTN|p.P22810Hfs*10|1|0.03|ENSG00000155657|chr2:178572780-178572781|-/AAAT|frameshift_variant;REV__TTN|p.V13823*|1|0.28|ENSG00000155657|chr2:178620027-178620027|C/-|frameshift_variant;REV__TTN|p.V22573Cfs*4|2|0.31|ENSG00000155657|chr2:178573492-178573492|C/-|frameshift_variant;REV__TTN|p.V27442Cfs*4|1|0.05|ENSG00000155657|chr2:178558107-178558108|-/A|frameshift_variant	39.252832667884924	1.7418937515398478	5				NaN	NaN	0	NaN	1415	2965	4377
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4383	17.517	NaN	2182.2	30	0	273.1	0.106	+			40395	STVDAEAVHK	10	57	528.7711442550174	1055.5277355768346	2	528.7713623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STVDAEAVHK_	ENSG00000116062|ENST00000234420|MSH6;nc|ENSG00000116062|P52701-3|MSH6;nc|ENSG00000116062|P52701-4|MSH6	82.7504851949679	0.1731497355276012	5				NaN	NaN	0	NaN	1416	2965	4377
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4384	17.519	NaN	2973.2	30	0	521.85	0.036			+	3292	ASLRLAYRGA	10	33	359.87725830078125	NaN	0	359.87725830078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASLRLAYRGA_	REV__ENST00000559243.1_2_15:74509714-74510888:+|nuORF;REV__nc|ENSG00000140481|Q8N5R6-2|CCDC33;REV__nc|ENSG00000140481|Q8N5R6|CCDC33	23.52269567125451	0.42010282974921537	5				NaN	NaN	0	NaN	1417	2965	4377
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4392	17.538	NaN	2723.9	30	0	404.1	0.214	+			41118	SVISHQHLSK	10	64	568.3161936988703	1134.6178344645405	2	568.31591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVISHQHLSK_	ENSG00000164749|ENST00000396423|HNF4G;nc|ENSG00000164749|Q14541-2|HNF4G;nc|ENSG00000164749|Q14541|HNF4G	131.115847015877	0.013122790858444951	5				NaN	NaN	0	NaN	1422	2968	4391
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4393	17.541	NaN	1174	30	0	172.76	0.106			+	25649	LQTSSGVIV	9	45	452.26113088809177	NaN	0	452.26123046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LQTSSGVIV_	REV__ENSG00000125434|ENST00000577745|SLC25A35;REV__nc|ENSG00000125434|Q3KQZ1-2|SLC25A35;REV__nc|ENSG00000125434|Q3KQZ1-3|SLC25A35;REV__nc|ENSG00000125434|Q3KQZ1-4|SLC25A35	82.30502934623384	0.06348534290027165	5				NaN	NaN	0	NaN	1423	2968	4391
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4394	17.543	NaN	1900.1	30	0	294.06	0.106	+			47143	VLQNHLTEVL	10	53	583.3305899307613	NaN	0	583.3306274414062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VLQNHLTEVL_	ENSG00000049239|ENST00000377403|H6PD;H6PD|p.D262N|1|0.33|ENSG00000049239|chr1:9262097-9262097|G/A|missense_variant;nc|ENSG00000049239|O95479-2|H6PD	59.93077597824379	0.23484348948204886	5				NaN	NaN	0	NaN	1424	2968	4391
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4395	17.545	NaN	1370.5	30	0	147.51	0.106			+	29969	PPAALSDG	8	44	364.1856381929418	726.3567234526836	2	364.18475341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PPAALSDG_	REV__EML3|p.I139Sfs*43|1|0.56|ENSG00000149499|chr11:62611125-62611125|C/-|frameshift_variant;REV__EML3|p.L72Tfs*46|1|0.31|ENSG00000149499|chr11:62611326-62611327|-/C|frameshift_variant;REV__ENSG00000149499|ENST00000394773|EML3;REV__nc|ENSG00000149499|Q32P44-2|EML3;REV__nc|ENSG00000149499|Q32P44-3|EML3	21.70233525837049	0.7917639344264583	5				NaN	NaN	0	NaN	1425	2968	4391
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4396	17.547	NaN	627.87	30	0	237.78	0.106				-1	CTGCCCCCCAS	11	28	404.76141357421875	NaN	0	404.76141357421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term),2 Carbamidomethyl (C)	_(Acetyl (Protein N-term))CTGC(Carbamidomethyl (C))CC(Carbamidomethyl (C))CCCAS_	ENST00000562592.5_1_16:57770947-57775680:+|nuORF	6.320883175729509	0.456735970842152	5				NaN	NaN	0	NaN	1426	2968	4391
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4397	17.548	NaN	974.99	30	0	181.63	0.106				-1	 	0	36	385.74313165335434	769.4717103735087	2	385.7424621582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1427	2968	4391
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4398	17.55	NaN	6039.1	30	0	1745.9	0.038			+	22036	KSIEVEIMQQ	10	64	602.8160016286466	1203.6174503240932	2	602.81494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KSIEVEIMQQ_	REV__ENSG00000168502|ENST00000695636|MTCL1;REV__MTCL1|p.G1084Vfs*116|1|0.23|ENSG00000168502|chr18:8798144-8798144|G/-|frameshift_variant;REV__MTCL1|p.G604Afs*38|1|0.5|ENSG00000168502|chr18:8783840-8783840|G/-|frameshift_variant;REV__MTCL1|p.L1858Wfs*5|1|0.26|ENSG00000168502|chr18:8826125-8826125|C/-|frameshift_variant;REV__MTCL1|p.L694Cfs*5|1|0.37|ENSG00000168502|chr18:8784107-8784107|C/-|frameshift_variant;REV__MTCL1|p.P1448Afs*83|1|0.4|ENSG00000168502|chr18:8824888-8824889|-/G|frameshift_variant;REV__MTCL1|p.P1841Lfs*22|1|0.05|ENSG00000168502|chr18:8826071-8826071|C/-|frameshift_variant;REV__MTCL1|p.W1259Efs*14|1|0.09|ENSG00000168502|chr18:8813191-8813192|-/GAGCC|frameshift_variant;REV__nc|ENSG00000168502|Q9Y4B5-2|MTCL1;REV__nc|ENSG00000168502|Q9Y4B5-3|MTCL1;REV__nc|ENSG00000168502|Q9Y4B5|MTCL1	61.76455937419982	0.3497917639301274	5				NaN	NaN	0	NaN	1428	2968	4391
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4409	17.574	NaN	2534.7	30	0	507.99	0.214			+	50332	WVAEELAV	8	50	458.7414624704075	915.468372007615	2	458.7402038574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WVAEELAV_	REV__DNHD1|p.Q530Tfs*14|1|0.11|ENSG00000179532|chr11:6519794-6519795|-/ACTCGCTC|frameshift_variant;REV__DNHD1|p.R1358Afs*11|1|0.16|ENSG00000179532|chr11:6545007-6545007|C/-|frameshift_variant;REV__DNHD1|p.S3597Rfs*6|1|0.1|ENSG00000179532|chr11:6565718-6565719|-/AG|frameshift_variant;REV__DNHD1|p.T4259Pfs*33|2|0.33|ENSG00000179532|chr11:6568772-6568772|C/-|frameshift_variant;REV__ENSG00000179532|ENST00000254579|DNHD1;REV__ENST00000473019.5_1_11:6518539-6524157:+|nuORF;REV__nc|ENSG00000179532|Q96M86-4|DNHD1	44.53106598305862	0.628196326904373	5				NaN	NaN	0	NaN	1436	2971	4408
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4410	17.578	NaN	1670.8	30	0	704.25	0.106				-1	MGKCTRRPCWE	11	37	741.3234722237779	1480.6323915143557	2	741.3220825195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term),Carbamidomethyl (C),Oxidation (M)	_(Acetyl (Protein N-term))M(Oxidation (M))GKCTRRPC(Carbamidomethyl (C))WE_	ENST00000431736.6_1_11:118244245-118244281:+|nuORF	18.262085536374414	0.7849791996189919	5				NaN	NaN	0	NaN	1437	2971	4408
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4411	17.58	NaN	2976.1	30	0	238.84	0.037	+			43133	TESCLSTRKK	10	63	576.8051035543133	1151.5956541754265	2	576.8043823242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TESCLSTRKK_	CEP162|p.K1098Rfs*20|1|0.46|ENSG00000135315|chr6:84152881-84152881|T/-|frameshift_variant;CEP162|p.N1181Mfs*3|2|0.21|ENSG00000135315|chr6:84152632-84152632|T/-|frameshift_variant;CEP162|p.Q686Tfs*11|1|0.39|ENSG00000135315|chr6:84174158-84174159|-/T|frameshift_variant;CEP162|p.R1099Efs*46|2|0.27|ENSG00000135315|chr6:84152880-84152881|-/T|frameshift_variant;ENSG00000135315|ENST00000403245|CEP162;ENST00000497936.5_1_6:84884653-84936120:-|nuORF;nc|ENSG00000135315|Q5TB80-2|CEP162	58.2462437865262	0.38179041844353556	5				NaN	NaN	0	NaN	1438	2971	4408
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4422	17.603	NaN	3705	30	0	1019.6	0.215	+			15220	GTSSSAASSLK	11	55	498.25469843657174	994.4948439399435	2	498.25372314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTSSSAASSLK_	ARID1A|p.F2141Sfs*59|5|0.26|ENSG00000117713|chr1:26780313-26780313|C/-|frameshift_variant;ARID1A|p.K1161Sfs*19|1|0.29|ENSG00000117713|chr1:26772573-26772573|A/-|frameshift_variant;ARID1A|p.M1564Hfs*8|1|0.18|ENSG00000117713|chr1:26774910-26774911|-/C|frameshift_variant;ARID1A|p.N1475Tfs*6|1|0.36|ENSG00000117713|chr1:26774648-26774648|A/-|frameshift_variant;ARID1A|p.P1115Qfs*46|1|0.32|ENSG00000117713|chr1:26771260-26771260|C/-|frameshift_variant;ARID1A|p.P1326Rfs*155|1|0.15|ENSG00000117713|chr1:26773685-26773685|C/-|frameshift_variant;ARID1A|p.P1406Rfs*37|1|0.42|ENSG00000117713|chr1:26774444-26774448|CCCCA/-|frameshift_variant;ARID1A|p.P1568Lfs*44|1|0.14|ENSG00000117713|chr1:26774926-26774926|C/-|frameshift_variant;ARID1A|p.P1575Hfs*37|1|0.38|ENSG00000117713|chr1:26774947-26774947|C/-|frameshift_variant;ARID1A|p.P2114Rfs*21|1|0.46|ENSG00000117713|chr1:26780236-26780236|C/-|frameshift_variant;ARID1A|p.V2244Gfs*34|1|0.31|ENSG00000117713|chr1:26780626-26780627|-/G|frameshift_variant;ENSG00000049618|ENST00000636930|ARID1B;ENSG00000117713|ENST00000324856|ARID1A;nc|ENSG00000049618|Q8NFD5-1|ARID1B;nc|ENSG00000049618|Q8NFD5-2|ARID1B;nc|ENSG00000049618|Q8NFD5|ARID1B;nc|ENSG00000117713|O14497-2|ARID1A;nc|ENSG00000117713|O14497-3|ARID1A	99.78786539795823	0.061125669442822994	5				NaN	NaN	0	NaN	1446	2974	4421
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4423	17.607	NaN	3761.2	30	0	1882.1	0.106			+	-1	TQGCERERSSQ	11	57	669.2965138584464	1336.5784747836926	2	669.2952270507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_TQGC(Carbamidomethyl (C))ERERSSQ_	REV__ENSG00000253958|ENST00000519106|CLDN23	38.753607047826485	0.5749975102143227	5				NaN	NaN	0	NaN	1447	2974	4421
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4424	17.609	NaN	2463.2	30	0	225.85	0.106	+			40583	SVAELRSQK	9	56	509.28844669053336	1016.5623404478667	2	509.2867431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVAELRSQK_	ENSG00000131149|ENST00000253458|GSE1;nc|ENSG00000131149|Q14687-2|GSE1;nc|ENSG00000131149|Q14687-3|GSE1	106.88024417677582	0.032181361622142884	5				NaN	NaN	0	NaN	1448	2974	4421
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4425	17.611	NaN	879.56	30	0	193.81	0.106				-1	 	0	33	400.71416485456007	799.4137767759202	2	400.7129211425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1449	2974	4421
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4426	17.612	NaN	1394.9	30	0	195.06	0.106	+			22589	KTSTVPPSLRK	11	48	607.3670043945312	NaN	0	607.3670043945312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KTSTVPPSLRK_	ENSG00000213676|ENST00000375203|ATF6B;nc|ENSG00000213676|Q99941-2|ATF6B	53.01288593483079	0.2936790592215139	5				NaN	NaN	0	NaN	1450	2974	4421
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4427	17.614	NaN	4254.4	30	0	1281.8	0.035	+			42016	SVYSGIRHK	9	58	523.7913330948057	1045.5681132564114	2	523.7911987304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVYSGIRHK_	ENSG00000068383|ENST00000368594|INPP5A;ENST00000487614.1_1_10:134511381-134540457:+|nuORF;ENST00000498337.1_1_10:134523853-134567324:+|nuORF;INPP5A|p.P199H|1|0.09|ENSG00000068383|chr10:132710405-132710405|C/A|missense_variant;JAG1-INPP5A|1|fusion	115.49404669440601	0.023927554121326553	5				NaN	NaN	0	NaN	1451	2974	4421
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4444	17.649	NaN	9204.1	30	0	1591	0.214	+			38269	SQNTDMVQK	9	72	525.7489185106596	1049.483284088119	2	525.7476196289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SQNTDMVQK_	ENSG00000113282|ENST00000411809|CLINT1	140.11223852658463	0.010427410095706195	5				NaN	NaN	0	NaN	1465	2977	4443
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4445	17.652	NaN	4261.2	30	0	530.71	0.106	+			23152	KVYDKAINR	9	66	553.8204757638407	1105.6263985944813	2	553.8195190429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVYDKAINR_	ENSG00000164190|ENST00000282516|NIPBL;ENST00000514335.1_1_5:37051847-37064632:+|nuORF;nc|ENSG00000164190|Q6KC79-2|NIPBL;NIPBL|p.I2776Lfs*3|1|0.17|ENSG00000164190|chr5:37064797-37064797|A/-|frameshift_variant	133.7523857240709	0.013411071971993946	5				NaN	NaN	0	NaN	1466	2977	4443
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4446	17.654	NaN	2656.8	30	0	327.98	0.106				-1	KEKNKIMQ	8	59	517.7870113941286	NaN	0	517.7866821289062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_KEKNKIM(Oxidation (M))Q_	tr|U7T5Q5|U7T5Q5_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00137PE=4SV=1	66.42927471994793	1.7418937515398478	5				NaN	NaN	0	NaN	1467	2977	4443
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4447	17.656	NaN	798.64	30	0	123.95	0.106	+			30615	QARLSDTA	8	40	431.2249706174032	NaN	0	430.740234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QARLSDTA_	ENSG00000107731|ENST00000335350|UNC5B;ENSG00000182168|ENST00000453304|UNC5C;nc|ENSG00000107731|Q8IZJ1-2|UNC5B;nc|ENSG00000182168|O95185-2|UNC5C;UNC5C|p.Q860Rfs*14|1|0.28|ENSG00000182168|chr4:95170206-95170206|G/-|frameshift_variant	27.882242232435846	1.7418937515398478	5				NaN	NaN	0	NaN	1468	2977	4443
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4448	17.658	NaN	1304.4	30	0	216.21	0.106				-1	 	0	41	485.7672157650745	969.5198785969491	2	485.7659912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1469	2977	4443
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4449	17.66	NaN	1889.1	30	0	823.1	0.036	+			48020	VSRGRSQEK	9	30	349.52935791015625	NaN	0	349.52935791015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VSRGRSQEK_	ENSG00000116350|ENST00000373795|SRSF4	23.52269567125451	0.3573684076213556	5				NaN	NaN	0	NaN	1470	2977	4443
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4450	17.66	NaN	914.11	30	0	233.08	0.142	+			16685	HIRVGVVGLPN	11	42	580.8493041992188	NaN	0	580.8493041992188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HIRVGVVGLPN_	ENSG00000130119|ENST00000360845|GNL3L	19.1035232394073	0.456735970842152	5				NaN	NaN	0	NaN	1471	2977	4443
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4468	17.7	NaN	12025	30	0	1599.2	0.214	+			3717	ATAASSSSLEK	11	80	526.2687844271915	1050.5230159211828	2	526.2682495117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATAASSSSLEK_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENST00000417985.1_1_X:46147855-46148119:-|nuORF;ENST00000418987.2_1_9:103493819-103494230:+|nuORF;ENST00000423183.1_1_3:12112396-12112453:+|nuORF;ENST00000450451.1_1_1:238090483-238090852:+|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2	125.68205650279488	0.009258456973060042	5				NaN	NaN	0	NaN	1486	2980	4467
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4469	17.703	NaN	1702.3	30	0	172.16	0.106			+	19257	KAEDVEKIS	9	51	509.77471923828125	NaN	0	509.77471923828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KAEDVEKIS_	REV__CAST|p.E474Kfs*10|1|0.39|ENSG00000153113|chr5:96754695-96754695|A/-|frameshift_variant;REV__ENSG00000153113|ENST00000675179|CAST;REV__ENST00000513666.5_1_5:96073558-96090478:+|nuORF;REV__nc|ENSG00000153113|P20810-10|CAST;REV__nc|ENSG00000153113|P20810-2|CAST;REV__nc|ENSG00000153113|P20810-3|CAST;REV__nc|ENSG00000153113|P20810-4|CAST;REV__nc|ENSG00000153113|P20810-5|CAST;REV__nc|ENSG00000153113|P20810-7|CAST;REV__nc|ENSG00000153113|P20810-8|CAST;REV__nc|ENSG00000153113|P20810-9|CAST;REV__nc|ENSG00000153113|P20810|CAST	77.31757898189308	0.08057531075035683	5				NaN	NaN	0	NaN	1487	2980	4467
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4470	17.705	NaN	2335	30	0	584.13	0.106				-1	 	0	53	503.78871571678025	1005.5628785003605	2	503.7882995605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1488	2980	4467
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4471	17.707	NaN	4000.6	30	0	790.72	0.106	+			40064	STNNMAYNK	9	64	521.7361518829101	1041.4577508326201	2	521.7360229492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STNNMAYNK_	ENSG00000163110|ENST00000317968|PDLIM5	120.8684288430529	0.02067403653475984	5				NaN	NaN	0	NaN	1489	2980	4467
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4472	17.709	NaN	1153.9	30	0	152.6	0.106	+			32624	QYRGIILAE	9	47	531.8018188476562	NaN	0	531.8018188476562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QYRGIILAE_	ENSG00000128346|ENST00000403305|C22orf23	23.04248740728303	0.3589936788096251	5				NaN	NaN	0	NaN	1490	2980	4467
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4473	17.711	NaN	1653	30	0	366.69	0.036			+	8881	EESNNVCSGR	10	44	547.7300811307531	1093.445609328306	2	547.730224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EESNNVCSGR_	REV__ENSG00000116106|ENST00000281821|EPHA4;REV__EPHA4|p.M245Cfs*89|1|0.35|ENSG00000116106|chr2:221563821-221563821|T/-|frameshift_variant;REV__EPHA4|p.P846Sfs*25|1|0.19|ENSG00000116106|chr2:221430113-221430114|-/G|frameshift_variant;REV__nc|ENSG00000116106|P54764-2|EPHA4	31.529811441608018	0.6223461015008678	5				NaN	NaN	0	NaN	1491	2980	4467
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4474	17.711	NaN	2505.7	30	0	274.1	0.141			+	20716	KGSKEDELVA	10	61	538.2873125216602	1074.5600721101202	2	538.2870483398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KGSKEDELVA_	REV__ENSG00000132554|ENST00000360863|RGS22;REV__nc|ENSG00000132554|Q8NE09-3|RGS22	95.81516180277367	0.09778090853194907	5				NaN	NaN	0	NaN	1492	2980	4467
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4489	17.745	NaN	35875	30	0	17882	0.211			+	8991	EFRAPRFECCH	11	91	697.8073248640552	1393.6000967949103	2	697.8058471679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EFRAPRFECCH_	REV__ENST00000506043.1_1_X:77218054-77218261:+|nuORF	54.343338949951054	0.37394860514808087	5				NaN	NaN	0	NaN	1504	2983	4488
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4490	17.748	NaN	12725	30	0	4074.9	0.106			+	34375	RTRKVELK	8	77	515.330865765661	1028.6471785981219	2	515.3302001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RTRKVELK_	REV__nc|ENSG00000284862|Q9UFE4-2|CCDC39;REV__nc|ENSG00000284862|Q9UFE4|CCDC39	42.396135135203025	0.6414440140393314	5				NaN	NaN	0	NaN	1505	2983	4488
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4491	17.75	NaN	5318.4	30	0	1217	0.106	+			33853	RRGVWLVA	8	65	478.79359811489326	955.5726432965865	2	478.7920837402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RRGVWLVA_	ENSG00000144893|ENST00000687756|MED12L;MED12L|p.L1417Sfs*14|1|0.06|ENSG00000144893|chr3:151378044-151378044|C/-|frameshift_variant;MED12L|p.N1494Rfs*10|1|0.1|ENSG00000144893|chr3:151380219-151380220|-/GAAATAATGCATT|frameshift_variant;MED12L|p.T1760Pfs*44|1|0.42|ENSG00000144893|chr3:151388100-151388100|A/-|frameshift_variant;nc|ENSG00000144893|Q86YW9-4|MED12L;nc|ENSG00000144893|Q86YW9|MED12L	46.76643321282427	0.6143254112625767	5				NaN	NaN	0	NaN	1506	2983	4488
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4492	17.752	NaN	2263.2	30	0	285.21	0.106			+	29581	PFLHEKDVQA	10	54	592.3072509765625	NaN	0	592.3072509765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PFLHEKDVQA_	REV__ENSG00000122971|ENST00000242592|ACADS;REV__ENST00000539690.1_1_12:121163604-121175022:+|nuORF	35.17822180527639	0.3846679649904324	5				NaN	NaN	0	NaN	1507	2983	4488
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4493	17.754	NaN	4600	30	0	927.14	0.106			+	45855	VALMGAVKLK	10	40	343.8889465332031	NaN	0	343.8889465332031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VALMGAVKLK_	REV__ENSG00000125780|ENST00000381458|TGM3	31.529811441608018	0.39664753963064203	5				NaN	NaN	0	NaN	1508	2983	4488
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4494	17.756	NaN	1769.5	30	0	401.14	0.033			+	3529	ASSPIPVGF	9	41	437.7347756243989	NaN	0	437.7348327636719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASSPIPVGF_	REV__ENSG00000165124|ENST00000374469|SVEP1;REV__nc|ENSG00000165124|Q4LDE5-3|SVEP1;REV__SVEP1|p.Y3375Mfs*48|1|0.3|ENSG00000165124|chr9:110386012-110386012|A/-|frameshift_variant	33.51558372728122	0.30835390848773375	5				NaN	NaN	0	NaN	1509	2983	4488
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4495	17.756	NaN	6202.4	30	0	1970.9	0.138	+			2754	ARGFSPHAG	9	59	450.2278979123432	898.4412428914865	2	450.2266845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ARGFSPHAG_	COL22A1|p.S128G|1|0.3|ENSG00000169436|chr8:138878026-138878026|T/C|missense_variant	60.97194046774394	0.20551255781574032	5				NaN	NaN	0	NaN	1510	2983	4488
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4509	17.788	NaN	25410	30	0	3958.6	0.214	+			40206	STSCPVVQK	9	79	503.25585392734695	1004.4971549214939	2	503.2548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_STSC(Carbamidomethyl (C))PVVQK_	ENSG00000130935|ENST00000253247|NOL11;ENST00000583108.5_1_17:65733963-65734484:+|nuORF	180.92599232761785	0.0012030822705978085	5				NaN	NaN	0	NaN	1521	2986	4508
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4510	17.791	NaN	16331	30	0	3352.5	0.106			+	42279	TADLPHHR	8	71	473.7464710130727	945.4783890929455	2	473.7452697753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TADLPHHR_	REV__ENSG00000174332|ENST00000628545|GLIS1;REV__nc|ENSG00000174332|Q8NBF1|GLIS1	65.80317337860623	0.44433089765398776	5				NaN	NaN	0	NaN	1522	2986	4508
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4511	17.793	NaN	4546.1	30	0	427.75	0.106	+			15701	GVNDSPALKK	10	61	514.7917771712455	1027.5690014092909	2	514.7903442382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GVNDSPALKK_	ENSG00000018625|ENST00000361216|ATP1A2;ENSG00000075673|ENST00000381946|ATP12A;ENSG00000105409|ENST00000648268|ATP1A3;ENSG00000105675|ENST00000262623|ATP4A;ENSG00000132681|ENST00000368081|ATP1A4;ENSG00000163399|ENST00000295598|ATP1A1;ENST00000418334.5_1_1:160144048-160152563:+|nuORF;ENST00000472488.5_1_1:160085570-160106822:+|nuORF;nc|ENSG00000075673|P54707-2|ATP12A;nc|ENSG00000105409|P13637-2|ATP1A3;nc|ENSG00000105409|P13637-3|ATP1A3;nc|ENSG00000163399|P05023-3|ATP1A1;nc|ENSG00000163399|P05023-4|ATP1A1	51.52775601994872	0.4429225830406686	5				NaN	NaN	0	NaN	1523	2986	4508
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4512	17.795	NaN	4447.4	30	0	1321.1	0.106	+			30594	QAQDLHLE	8	60	477.23865493234973	952.4627569314995	2	477.23736572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QAQDLHLE_	ENST00000439384.5_3_7:29186332-29186525:+|nuORF	74.25504064058377	0.37144338840759816	5				NaN	NaN	0	NaN	1524	2986	4508
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4513	17.797	NaN	1382.8	30	0	195.92	0.106			+	21436	KNATREIGGV	10	52	522.7945758677671	1043.574598802334	2	522.7991333007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KNATREIGGV_	REV__ENST00000552285.5_1_12:58087830-58087884:+|nuORF	30.317721548370564	0.6322445173429027	5				NaN	NaN	0	NaN	1525	2986	4508
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4514	17.799	NaN	1608.4	30	0	294.42	0.034			+	2596	AQGLAQSLQ	9	42	458.2492898618278	914.4840267904556	2	458.2478942871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AQGLAQSLQ_	REV__ENSG00000135637|ENST00000393965|CCDC142;REV__nc|ENSG00000135637|Q17RM4-2|CCDC142;REV__nc|ENSG00000135637|Q17RM4-3|CCDC142	40.77816245573522	0.41113185337114944	5				NaN	NaN	0	NaN	1526	2986	4508
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4515	17.799	NaN	3506	30	0	586.56	0.139			+	20615	KGDKIKIGL	9	63	486.3167747992906	970.6189966653812	2	486.3150634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KGDKIKIGL_	REV__tr|U7T6E8|U7T6E8_FUSNUCysteine--tRNAligaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=cysSPE=3SV=1	56.43379154798735	0.2433427591689151	5				NaN	NaN	0	NaN	1527	2986	4508
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4527	17.827	NaN	2264.1	30	0	370.45	0.214	+			15432	GTYRDANIK	9	47	519.2731339050313	NaN	0	519.2728271484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTYRDANIK_	ENSG00000112531|ENST00000361752|QKI;nc|ENSG00000112531|Q96PU8-3|QKI;nc|ENSG00000112531|Q96PU8-5|QKI;nc|ENSG00000112531|Q96PU8-6|QKI;nc|ENSG00000112531|Q96PU8-8|QKI;nc|ENSG00000112531|Q96PU8-9|QKI	36.31764250033197	0.294206896222586	5				NaN	NaN	0	NaN	1536	2989	4526
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4528	17.831	NaN	1049.1	30	0	323.62	0.106	+			4297	ATGGWSSSK	9	37	440.71143877492	NaN	0	440.7113037109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATGGWSSSK_	BAHD1|p.P431Lfs*16|1|0.42|ENSG00000140320|chr15:40459754-40459754|C/-|frameshift_variant;ENSG00000140320|ENST00000416165|BAHD1;nc|ENSG00000140320|Q8TBE0-2|BAHD1;nc|ENSG00000140320|Q8TBE0-3|BAHD1	42.86426827375447	0.2558691296974908	5				NaN	NaN	0	NaN	1537	2989	4526
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4529	17.833	NaN	1071.8	30	0	137.37	0.106				-1	IDKMTKKM	8	37	513.770263671875	NaN	0	513.770263671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Oxidation (M)	_IDKM(Oxidation (M))TKKM(Oxidation (M))_	ENSG00000132394|ENST00000254730|EEFSEC;ENST00000484438.1_1_3:127872521-128060079:+|nuORF;nc|ENSG00000132394|P57772-2|EEFSEC	30.503639358989545	1.7418937515398478	5				NaN	NaN	0	NaN	1538	2989	4526
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4530	17.835	NaN	3793.1	30	0	593.95	0.106	+			5570	AVAQRGSSVP	10	64	486.2671013826605	NaN	0	486.266845703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVAQRGSSVP_	ENSG00000186976|ENST00000262726|EFCAB6;nc|ENSG00000186976|Q5THR3-2|EFCAB6;nc|ENSG00000186976|Q5THR3-3|EFCAB6;nc|ENSG00000186976|Q5THR3-4|EFCAB6	66.42927471994793	0.1817757526326617	5				NaN	NaN	0	NaN	1539	2989	4526
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4531	17.836	NaN	1656.3	30	0	250.81	0.106	+			30773	QDRRMMFPP	9	58	589.2845984247169	NaN	0	589.2845458984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QDRRMMFPP_	ENSG00000150527|ENST00000640607|MIA2;ENSG00000236761|ENST00000314099|CTAGE9;ENST00000435712.1_1_10:131904549-131906742:+|nuORF;nc|ENSG00000150527|Q96PC5-10|MIA2;nc|ENSG00000150527|Q96PC5-11|MIA2;nc|ENSG00000150527|Q96PC5-12|MIA2;nc|ENSG00000150527|Q96PC5-13|MIA2;nc|ENSG00000150527|Q96PC5-14|MIA2;nc|ENSG00000150527|Q96PC5-5|MIA2;nc|ENSG00000150527|Q96PC5-6|MIA2;nc|ENSG00000150527|Q96PC5-7|MIA2;nc|ENSG00000150527|Q96PC5-8|MIA2;nc|ENSG00000150527|Q96PC5-9|MIA2;nc|ENSG00000288784|Q8IX94|CTAGE4;nc|ENSG00000289604|P0CG41|CTAGE8	60.97194046774394	0.14517358171632622	5				NaN	NaN	0	NaN	1540	2989	4526
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4532	17.838	NaN	1619.9	30	0	237.08	0.106	+			48904	VVDNGSGMCK	10	53	533.7373236704072	1065.4600944076144	2	533.7371215820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_VVDNGSGMC(Carbamidomethyl (C))K_	ACTBL2|p.R29Gfs*7|1|0.37|ENSG00000169067|chr5:57482623-57482623|G/-|frameshift_variant;ENSG00000075624|ENST00000646664|ACTB;ENSG00000169067|ENST00000423391|ACTBL2;ENST00000418351.1_1_15:44282253-44282364:-|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000477812.1_1_7:5569027-5569288:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF	63.53385203322761	0.33370026130094593	5				NaN	NaN	0	NaN	1541	2989	4526
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4533	17.84	NaN	735.1	30	0	50.412	0.036				-1	QEMAGRALK	9	26	340.5138854980469	NaN	0	340.5138854980469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_QEM(Oxidation (M))AGRALK_	ENSG00000150457|ENST00000382592|LATS2	18.262085536374414	0.37517301184500873	5				NaN	NaN	0	NaN	1542	2989	4526
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4547	17.87	NaN	9477.4	30	0	1816.9	0.215	+			4115	ATDYGTIKK	9	68	498.7725955823052	995.5306382314104	2	498.7716369628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATDYGTIKK_	ENSG00000112902|ENST00000382496|SEMA5A	152.06079943815163	0.00638878961959199	5				NaN	NaN	0	NaN	1553	2992	4546
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4548	17.873	NaN	6079.9	30	0	687.23	0.106	+			34370	RTQNVLGEK	9	68	522.7945758677671	1043.574598802334	2	522.7937622070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RTQNVLGEK_	ENSG00000149273|ENST00000531188|RPS3;ENST00000407940.1_1_6:7339375-7339741:-|nuORF;ENST00000529173.5_1_11:75110591-75112804:+|nuORF;nc|ENSG00000149273|P23396-2|RPS3	90.14881205920913	0.06444578693273594	5				NaN	NaN	0	NaN	1554	2992	4546
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4549	17.875	NaN	5672.5	30	0	1159.3	0.106				-1	 	0	39	455.1893999623193	908.3642469914387	2	455.1882019042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1555	2992	4546
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4550	17.877	NaN	6829.9	30	0	1502.8	0.106			+	28878	NQEEFLMKQMD	11	50	706.8129609360334	1411.6113689388667	2	706.8111572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NQEEFLMKQMD_	REV__ENSG00000226650|ENST00000435029|KIF4B	30.317721548370564	0.6717830234747728	5				NaN	NaN	0	NaN	1556	2992	4546
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4551	17.879	NaN	5170.9	30	0	785.8	0.106				-1	 	0	56	431.2258123420759	860.4370717509519	2	431.2247314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1557	2992	4546
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4552	17.881	NaN	2147.7	30	0	394.03	0.106			+	13632	GMGPGVKK	8	49	387.2210788080985	772.4276046829971	2	387.219970703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GMGPGVKK_	REV__ENST00000465814.5_1_11:72423956-72425365:-|nuORF	54.76467175910256	0.5536104764165384	5				NaN	NaN	0	NaN	1558	2992	4546
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4553	17.882	NaN	1315.7	30	0	148.08	0.036	+			20834	KIIAPPERK	9	49	526.3355863088676	1050.6566196845351	2	526.3352661132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KIIAPPERK_	ACTA1|p.S340P|1|0.27|ENSG00000143632|chr1:229431615-229431615|A/G|missense_variant;ACTG1|p.Y337C|1|0.38|ENSG00000184009|chr17:81510808-81510808|T/C|missense_variant;ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENST00000415776.1_1_Y:19868883-19869072:-|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000493945.5_1_7:5567381-5567853:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2	45.908116695636124	0.35095954387056183	5				NaN	NaN	0	NaN	1559	2992	4546
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4570	17.918	NaN	33589	30	0	5118.3	0.214	+			13178	GHSTLQGTVK	10	87	514.2809786487575	1026.5474043643148	2	514.2802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GHSTLQGTVK_	ENSG00000179869|ENST00000435803|ABCA13;nc|ENSG00000179869|Q86UQ4-3|ABCA13;nc|ENSG00000179869|Q86UQ4-4|ABCA13;nc|ENSG00000179869|Q86UQ4-5|ABCA13;nc|ENSG00000179869|Q86UQ4-6|ABCA13;nc|ENSG00000179869|Q86UQ4-7|ABCA13;nc|ENSG00000179869|Q86UQ4|ABCA13	82.7504851949679	0.1731497355276012	5				NaN	NaN	0	NaN	1573	2995	4569
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4571	17.921	NaN	2447.7	30	0	466.03	0.106	+			6047	AVMGNPKVK	9	56	472.27416147915767	942.5337700251154	2	472.2729187011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVMGNPKVK_	ENSG00000223609|ENST00000650601|HBD;ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF;HBD|p.A63V|1|0.34|ENSG00000223609|chr11:5234118-5234118|G/A|missense_variant	63.30626980617807	0.18605348971131092	5				NaN	NaN	0	NaN	1574	2995	4569
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4572	17.923	NaN	1606.7	30	0	141.97	0.106	+			35738	SDRRKESTR	9	64	567.8016832408612	1133.5888135485222	2	567.8009033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SDRRKESTR_	ENSG00000166446|ENST00000570137|CDYL2	47.227680397652996	0.3354815899219835	5				NaN	NaN	0	NaN	1575	2995	4569
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4573	17.925	NaN	1958.5	30	0	280.95	0.106	+			9710	EMKRVRNK	8	63	538.8006290188093	NaN	0	538.32763671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_EM(Oxidation (M))KRVRNK_	ENSG00000172465|ENST00000372625|TCEAL1	57.81127852772723	1.7418937515398478	5				NaN	NaN	0	NaN	1576	2995	4569
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4574	17.927	NaN	2461.2	30	0	355.49	0.106			+	11821	FSVHKQPQL	9	63	542.3002350505526	1082.585917167905	2	542.2994384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FSVHKQPQL_	REV__ENSG00000134982|ENST00000257430|APC;REV__nc|ENSG00000134982|P25054-2|APC;REV__nc|ENSG00000134982|P25054-3|APC	59.93077597824379	0.21419174904018318	5				NaN	NaN	0	NaN	1577	2995	4569
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4575	17.929	NaN	1083.8	30	0	110.48	0.035			+	9959	EREFLVTR	8	45	525.2908230022588	NaN	0	525.2908935546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EREFLVTR_	REV__ENSG00000204099|ENST00000407683|NEU4;REV__ENST00000488997.1_1_2:242752523-242755987:+|nuORF;REV__nc|ENSG00000204099|Q8WWR8-2|NEU4;REV__nc|ENSG00000204099|Q8WWR8-3|NEU4;REV__NEU4|p.W274Lfs*51|1|0.24|ENSG00000204099|chr2:241816407-241816408|-/CTGCC|frameshift_variant	34.172542307311794	1.7418937515398478	5				NaN	NaN	0	NaN	1578	2995	4569
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4576	17.929	NaN	911.27	30	0	211.13	0.139			+	20606	KGCHHCKLAMK	11	30	419.21021536818387	NaN	0	419.2102966308594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KGCHHCKLAMK_	REV__ZNF512|p.T286A|1|0.27|ENSG00000243943|chr2:27603227-27603227|A/G|missense_variant	23.37791116691581	0.456735970842152	5				NaN	NaN	0	NaN	1579	2995	4569
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4591	17.963	NaN	20637	30	0	9272.7	0.214			+	634	ADVTAKKAHS	10	57	343.1896595795225	1026.5471493387677	3	343.1891174316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ADVTAKKAHS_	REV__ENSG00000273841|ENST00000217893|TAF9;REV__ENST00000587506.1_1_19:30528395-30528668:+|nuORF	40.77816245573522	0.5419747034533848	5				NaN	NaN	0	NaN	1591	2998	4590
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4592	17.966	NaN	27840	30	0	5044.2	0.106				-1	 	0	77	535.3287028168959	1068.6428527005917	2	535.3276977539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1592	2998	4590
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4593	17.968	NaN	4183.7	30	0	470.98	0.106			+	47117	VLNFSPHLPG	10	62	540.7947024527343	1079.5748519722686	2	540.7938842773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VLNFSPHLPG_	REV__ENSG00000177666|ENST00000336615|PNPLA2;REV__ENST00000525250.5_1_11:821680-823850:+|nuORF	49.536043120802724	0.461275219792494	5				NaN	NaN	0	NaN	1593	2998	4590
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4594	17.97	NaN	8585.2	30	0	1616.2	0.106	+			1862	AILDKTTNK	9	72	502.2933927230126	1002.5722325128252	2	502.2925109863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AILDKTTNK_	ENSG00000076067|ENST00000262031|RBMS2;ENSG00000153250|ENST00000348849|RBMS1;nc|ENSG00000153250|P29558-2|RBMS1	107.45493779368988	0.031594950556992824	5				NaN	NaN	0	NaN	1594	2998	4590
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4595	17.972	NaN	8685.5	30	0	2780	0.106				-1	 	0	64	499.24883070241157	996.4831084716232	2	499.24761962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1595	2998	4590
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4596	17.974	NaN	4075.7	30	0	538.08	0.034	+			14252	GSSTIRNLK	9	60	488.2838997381575	974.553246543115	2	488.2822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GSSTIRNLK_	ENSG00000143393|ENST00000368873|PI4KB;nc|ENSG00000143393|Q9UBF8-2|PI4KB;nc|ENSG00000143393|Q9UBF8-3|PI4KB	54.776311868738084	0.25715957988447635	5				NaN	NaN	0	NaN	1596	2998	4590
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4597	17.974	NaN	743.11	30	0	66.342	0.138			+	38439	SSALLNKH	8	42	435.2450866699219	NaN	0	435.2450866699219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSALLNKH_	REV__ENSG00000143207|ENST00000367669|COP1;REV__nc|ENSG00000143207|Q8NHY2-2|COP1;REV__nc|ENSG00000143207|Q8NHY2-3|COP1;REV__nc|ENSG00000143207|Q8NHY2-4|COP1	38.80614096846853	1.7418937515398478	5				NaN	NaN	0	NaN	1597	2998	4590
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4614	18.011	NaN	42307	30	0	15214	0.214				-1	 	0	72	340.2019228727663	1017.5839392184989	3	340.2012023925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1611	3001	4613
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4615	18.015	NaN	69067	30	0	21069	0.106				-1	 	0	98	342.18250582715723	1023.5256880816717	3	342.18182373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1612	3001	4613
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4616	18.017	NaN	10797	30	0	1234.6	0.106	+			44930	TVALGHHKR	9	73	509.79930738349117	1017.5840618337824	2	509.7983703613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVALGHHKR_	ENST00000428482.5_2_2:242208371-242208434:-|nuORF	71.29570347882199	0.13518600952103718	5				NaN	NaN	0	NaN	1613	3001	4613
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4617	18.019	NaN	7999.9	30	0	1060.8	0.106	+			13888	GRDPQGAM	8	55	424.18936711850506	846.3641813038101	2	424.188232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_GRDPQGAM(Oxidation (M))_	ENSG00000160949|ENST00000409379|TONSL;nc|ENSG00000160949|Q96HA7-2|TONSL	47.91560031466742	0.6071945918984287	5				NaN	NaN	0	NaN	1614	3001	4613
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4618	18.02	NaN	3320.3	30	0	447.07	0.106			+	13838	GQSSYVASK	9	54	463.73338713376035	925.4522213343207	2	463.7321472167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GQSSYVASK_	REV__ENSG00000163913|ENST00000348417|IFT122;REV__nc|ENSG00000163913|Q9HBG6-5|IFT122;REV__nc|ENSG00000163913|Q9HBG6-8|IFT122	65.46538089061403	0.16805504838372562	5				NaN	NaN	0	NaN	1615	3001	4613
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4619	18.022	NaN	1995.8	30	0	212.69	0.035	+			6562	AYKKTSETL	9	62	520.7858709785884	1039.5571890239767	2	520.7849731445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AYKKTSETL_	ENSG00000076554|ENST00000518937|TPD52;ENST00000521354.5_1_8:80950353-81083761:-|nuORF;ENST00000522364.5_1_8:80963727-80992703:-|nuORF;nc|ENSG00000076554|P55327-2|TPD52;nc|ENSG00000076554|P55327-3|TPD52;nc|ENSG00000076554|P55327-5|TPD52;nc|ENSG00000076554|P55327-6|TPD52;nc|ENSG00000076554|P55327-7|TPD52;nc|ENSG00000076554|P55327|TPD52;TPD52|p.K164Sfs*5|1|0.09|ENSG00000076554|chr8:80051542-80051542|T/-|frameshift_variant	77.31757898189308	0.1091473830098891	5				NaN	NaN	0	NaN	1616	3001	4613
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4620	18.023	NaN	2636.3	30	0	350.31	0.141	+			19208	KAAEVLKVQK	10	62	557.3533211764221	NaN	0	557.3534545898438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KAAEVLKVQK_	ENSG00000112242|ENST00000346618|E2F3;nc|ENSG00000112242|O00716-2|E2F3	147.30332882356183	0.001650535592337172	5				NaN	NaN	0	NaN	1617	3001	4613
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4638	18.061	NaN	3803.7	30	0	1825.2	0.214			+	10532	EWISEKSK	8	43	336.17892683572103	1005.5149511073631	3	336.1783142089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EWISEKSK_	REV__CLCN4|p.E682Sfs*10|5|0.38|ENSG00000073464|chrX:10220723-10220723|C/-|frameshift_variant;REV__CLCN4|p.F277Sfs*3|1|0.09|ENSG00000073464|chrX:10206760-10206760|T/-|frameshift_variant;REV__CLCN4|p.N387Ifs*36|1|0.43|ENSG00000073464|chrX:10208356-10208356|C/-|frameshift_variant;REV__ENSG00000073464|ENST00000380833|CLCN4	40.5726180659479	0.6527593143185008	5				NaN	NaN	0	NaN	1632	3004	4637
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4639	18.064	NaN	3973.3	30	0	880.04	0.106				-1	 	0	54	434.23895857629935	866.4633642193987	2	434.2376403808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1633	3004	4637
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4640	18.066	NaN	2362.2	30	0	465.41	0.106				-1	 	0	54	426.7277545330497	851.4409561328994	2	426.7265319824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1634	3004	4637
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4641	18.068	NaN	5804.4	30	0	2978.8	0.106	+			30472	QAEEKAHAF	9	60	515.7524447042724	1029.4903364753447	2	515.7515258789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QAEEKAHAF_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	39.252832667884924	0.4290233611298554	5				NaN	NaN	0	NaN	1635	3004	4637
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4642	18.07	NaN	6666.5	30	0	2220.2	0.106				-1	 	0	60	456.76759818266993	911.5206434321399	2	456.7665100097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1636	3004	4637
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4643	18.072	NaN	2713.5	30	0	348.05	0.034	+			6877	CLKETCEK	8	54	477.22439557767234	NaN	0	477.2504577636719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_CLKETCEK_	ENSG00000149554|ENST00000438015|CHEK1;nc|ENSG00000149554|O14757-2|CHEK1;nc|ENSG00000149554|O14757-3|CHEK1	63.30626980617807	1.7418937515398478	5				NaN	NaN	0	NaN	1637	3004	4637
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4644	18.072	NaN	6947.4	30	0	2000.9	0.139	+			35606	SCCPVGCAK	9	58	491.2010045767542	NaN	0	491.2009582519531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C)	_SCC(Carbamidomethyl (C))PVGC(Carbamidomethyl (C))AK_	CON__P67983;ENSG00000125144|ENST00000379811|MT1G;ENSG00000125148|ENST00000245185|MT2A;ENSG00000169688|ENST00000334346|MT1B;ENSG00000187193|ENST00000394485|MT1X;ENSG00000205364|ENST00000379818|MT1M;ENST00000330439.6_1_16:56660742-56660880:+|nuORF;ENST00000562017.1_1_16:56643131-56643263:+|nuORF;ENST00000563985.1_1_16:56642884-56643263:+|nuORF;ENST00000567300.1_1_16:56642646-56643263:+|nuORF;nc|ENSG00000125144|P13640-2|MT1G;nc|ENSG00000169715|P04732|MT1E	69.6276240434122	0.10825701912424071	5				NaN	NaN	0	NaN	1638	3004	4637
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4662	18.112	NaN	17503	30	0	6233.6	0.214	+			49408	VVTTLVLISY	10	55	369.8932472155301	1106.6579122467904	3	369.8924865722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVTTLVLISY_	ENSG00000111666|ENST00000229266|CHPT1;ENST00000546490.1_1_12:102091639-102108044:+|nuORF;nc|ENSG00000111666|Q8WUD6-2|CHPT1	22.579656572578934	0.6954366826851017	5				NaN	NaN	0	NaN	1653	3007	4661
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4663	18.115	NaN	1782.9	30	0	247.75	0.106	+			2676	AQNEPLTQK	9	55	514.7737202744055	1027.532887615611	2	514.7728881835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AQNEPLTQK_	ENSG00000156304|ENST00000286835|SCAF4;ENST00000467731.1_1_21:33057290-33073360:-|nuORF;nc|ENSG00000156304|O95104-2|SCAF4;nc|ENSG00000156304|O95104-3|SCAF4;SCAF4|p.E653Qfs*24|1|0.4|ENSG00000156304|chr21:31688393-31688394|-/TG|frameshift_variant;SCAF4|p.V1113Cfs*7|1|0.22|ENSG00000156304|chr21:31671506-31671506|C/-|frameshift_variant	66.96192283764107	0.15557981141143568	5				NaN	NaN	0	NaN	1654	3007	4661
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4664	18.117	NaN	7830.7	30	0	2067.4	0.106	+			49306	VVQRVEIHK	9	67	554.3360171184944	1106.6574813037887	2	554.33544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVQRVEIHK_	ENSG00000213977|ENST00000225525|TAX1BP3	60.11826168202944	0.21262886028301267	5				NaN	NaN	0	NaN	1655	3007	4661
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4665	18.119	NaN	7248.2	30	0	863.22	0.106			+	21114	KKRGFVQVS	9	69	524.8177809106388	1047.6210088880775	2	524.8167114257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KKRGFVQVS_	REV__ENSG00000105193|ENST00000251453|RPS16;REV__ENST00000469078.5_1_19:20235852-20236290:+|nuORF;REV__ENST00000601390.1_1_19:39926180-39926535:-|nuORF	98.58198989935565	0.04066992115528678	5				NaN	NaN	0	NaN	1656	3007	4661
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4666	18.121	NaN	18451	30	0	2894.6	0.106				-1	 	0	63	381.88819753897224	1142.6427632171167	3	381.8873291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1657	3007	4661
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4667	18.123	NaN	3645.6	30	0	933.26	0.036			+	44226	TRQSNRPSK	9	53	537.2935060182729	1072.5724591033456	2	537.2928466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TRQSNRPSK_	REV__ENST00000368667.6_1_6:112101798-112114872:-|nuORF	38.753607047826485	0.4348790777924195	5				NaN	NaN	0	NaN	1658	3007	4661
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4668	18.123	NaN	1489.2	30	0	305.05	0.14				-1	 	0	38	503.78871571678025	1005.5628785003605	2	503.78778076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1659	3007	4661
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4684	18.158	NaN	28766	30	0	4103.6	0.214				-1	 	0	77	524.7756914950261	1047.536830056852	2	524.7750244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1672	3010	4683
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4685	18.162	NaN	22518	30	0	8191.2	0.106				-1	 	0	72	350.1862289339209	1047.5368574019628	3	350.18548583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1673	3010	4683
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4686	18.164	NaN	5965	30	0	1816.7	0.106			+	-1	LSLALCIRL	9	49	353.55188329781356	1057.6338204936408	3	353.2168884277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LSLALC(Carbamidomethyl (C))IRL_	REV__ENSG00000152749|ENST00000376958|GPR180;REV__GPR180|p.L369Yfs*24|1|0.34|ENSG00000152749|chr13:94625981-94625981|T/-|frameshift_variant	32.81241826257853	0.4965981579233955	5				NaN	NaN	0	NaN	1674	3010	4683
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4687	18.166	NaN	4301	30	0	769.11	0.106	+			37618	SLQAKLERL	9	62	529.3229147156276	1056.631276498055	2	529.3222045898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLQAKLERL_	ENSG00000113569|ENST00000231498|NUP155;nc|ENSG00000113569|O75694-2|NUP155	58.22992032128504	0.22837015374068087	5				NaN	NaN	0	NaN	1675	3010	4683
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4688	18.168	NaN	3135.6	30	0	563.88	0.106	+			8878	EERRVKEVV	9	50	572.3285288479836	1142.6425047627672	2	572.3278198242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EERRVKEVV_	ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88813329-88813827:+|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P	40.77816245573522	0.41113185337114944	5				NaN	NaN	0	NaN	1676	3010	4683
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4689	18.169	NaN	1685.8	30	0	378.4	0.034	+			49101	VVLFLIEQ	8	46	480.78941416214917	NaN	0	480.7893371582031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VVLFLIEQ_	ENSG00000106013|ENST00000265224|ANKRD7;nc|ENSG00000106013|Q92527-2|ANKRD7	32.81241826257853	1.7418937515398478	5				NaN	NaN	0	NaN	1677	3010	4683
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4690	18.17	NaN	4366.4	30	0	1185.8	0.144			+	-1	KIVMVQTSTTA	11	47	398.88448898011626	1193.6316375405488	3	398.8836364746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_KIVM(Oxidation (M))VQTSTTA_	REV__ENSG00000169057|ENST00000453960|MECP2;REV__MECP2|p.E432Afs*3|1|0.03|ENSG00000169057|chrX:154030534-154030535|CC/-|frameshift_variant;REV__MECP2|p.K449Sfs*33|1|0.2|ENSG00000169057|chrX:154030482-154030482|T/-|frameshift_variant;REV__nc|ENSG00000169057|P51608|MECP2	17.16674453292914	0.7901079503840427	5				NaN	NaN	0	NaN	1678	3010	4683
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4705	18.203	NaN	15924	30	0	4320.5	0.215				-1	KNSSACEHSG	10	80	538.7245522830773	1075.4345516329545	2	538.7235107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_KNSSAC(Carbamidomethyl (C))EHSG_	NT5C3B|p.N212H|1|0.3|ENSG00000141698|chr17:41827560-41827560|T/G|missense_variant	52.936696900407355	0.4300801048568001	5				NaN	NaN	0	NaN	1690	3013	4704
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4706	18.206	NaN	6565.5	30	0	1808.3	0.106	+			40728	SVCGKSFSR	9	64	514.2538155423504	1026.4930781515006	2	514.2528686523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SVC(Carbamidomethyl (C))GKSFSR_	ENSG00000278129|ENST00000621650|ZNF8	56.632244143249146	0.24168844994051353	5				NaN	NaN	0	NaN	1691	3013	4704
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4707	18.208	NaN	36206	30	0	10283	0.106				-1	 	0	74	474.2624816671804	946.5104104011608	2	474.26116943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1692	3013	4704
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4708	18.21	NaN	3838	30	0	858.34	0.106	+			6805	CGGRVCAFD	9	50	464.19457332132487	926.3745937094498	2	464.1935729980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_CGGRVCAFD_	ENSG00000213203|ENST00000307194|GIMAP1	31.954861631926434	0.5046124803899898	5				NaN	NaN	0	NaN	1693	3013	4704
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4709	18.212	NaN	996.45	30	0	119.29	0.106	+			42703	TDAQGHSL	8	44	414.6967207848482	827.3788886364964	2	414.6956481933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TDAQGHSL_	ENSG00000137860|ENST00000347644|SLC28A2;SLC28A2|p.D48Mfs*52|1|0.38|ENSG00000137860|chr15:45253488-45253488|G/-|frameshift_variant	42.396135135203025	0.6414440140393314	5				NaN	NaN	0	NaN	1694	3013	4704
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4710	18.214	NaN	794.2	30	0	183.36	0.038	+			21786	KQTVISENYL	10	26	597.8227967262908	1193.6310405193815	2	597.821533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KQTVISENYL_	DOCK2|p.M1388Gfs*7|1|0.05|ENSG00000134516|chr5:170050344-170050345|-/AGGATGCTCATTAGAGATTT|frameshift_variant;DOCK2|p.N1321Kfs*10|1|0.37|ENSG00000134516|chr5:170045899-170045900|-/A|frameshift_variant;ENSG00000134516|ENST00000520908|DOCK2	19.996771675451527	0.7148376616046445	5				NaN	NaN	0	NaN	1695	3013	4704
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4711	18.214	NaN	802.32	30	0	121.92	0.141	+			14904	GTLTITLR	8	40	437.77139974112345	NaN	0	437.7713928222656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GTLTITLR_	ENSG00000095970|ENST00000373113|TREM2;nc|ENSG00000095970|Q9NZC2-2|TREM2;nc|ENSG00000095970|Q9NZC2-3|TREM2	51.33545320467046	1.7418937515398478	5				NaN	NaN	0	NaN	1696	3013	4704
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4721	18.24	NaN	16029	30	0	1188.6	0.214	+			27382	MKKHQSDLK	9	78	557.8048612433467	1113.5951695534934	2	557.8043823242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MKKHQSDLK_	ENSG00000174059|ENST00000310833|CD34;ENST00000485761.1_1_1:208057818-208072476:-|nuORF;nc|ENSG00000174059|P28906-2|CD34	65.15724298150197	0.17062369902793603	5				NaN	NaN	0	NaN	1703	3016	4720
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4722	18.243	NaN	10598	30	0	1516.7	0.106			+	40963	SVGAPPWAK	9	65	456.74965753988624	911.4847621465725	2	456.7482604980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVGAPPWAK_	REV__ENSG00000143437|ENST00000358595|ARNT;REV__nc|ENSG00000143437|P27540-2|ARNT;REV__nc|ENSG00000143437|P27540-4|ARNT	65.80317337860623	0.1652391959156183	5				NaN	NaN	0	NaN	1704	3016	4720
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4723	18.245	NaN	2637.5	30	0	763.97	0.106	+			10105	ESLLWKVLV	9	65	543.8312357075305	1085.6479184818609	2	543.8305053710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ESLLWKVLV_	ENSG00000043514|ENST00000316891|TRIT1;ENST00000462243.2_1_1:40318401-40323020:-|nuORF;ENST00000486825.6_1_1:40315918-40341739:-|nuORF;nc|ENSG00000043514|Q9H3H1-4|TRIT1;TRIT1|p.L334*|1|0.3|ENSG00000043514|chr1:39847225-39847225|A/-|frameshift_variant	68.84614121027924	0.14577793175421136	5				NaN	NaN	0	NaN	1705	3016	4720
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4724	18.247	NaN	3802.2	30	0	1093.5	0.106			+	33665	RNGNNGSPR	9	49	486.24165380546725	970.4687546777345	2	486.2402648925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RNGNNGSPR_	REV__ENSG00000116793|ENST00000369604|PHTF1;REV__ENST00000472612.5_1_1:114268399-114280846:-|nuORF;REV__nc|ENSG00000116793|Q9UMS5-2|PHTF1;REV__PHTF1|p.F546Sfs*2|1|0.17|ENSG00000116793|chr1:113705924-113705924|A/-|frameshift_variant;REV__PHTF1|p.M547Hfs*10|1|0.23|ENSG00000116793|chr1:113705923-113705924|-/A|frameshift_variant;REV__PHTF1|p.P491Hfs*15|1|0.16|ENSG00000116793|chr1:113706091-113706091|A/-|frameshift_variant;REV__PHTF1|p.S254Ffs*8|1|0.49|ENSG00000116793|chr1:113713301-113713302|-/A|frameshift_variant	34.172542307311794	0.4838870758800184	5				NaN	NaN	0	NaN	1706	3016	4720
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4725	18.249	NaN	1504.1	30	0	287.48	0.106	+			31828	QPRAQDHPL	9	51	531.2793451658961	1060.544137398592	2	531.2782592773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QPRAQDHPL_	ENST00000382734.9_1_22:25851689-25853254:+|nuORF	40.77816245573522	0.41113185337114944	5				NaN	NaN	0	NaN	1707	3016	4720
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4726	18.251	NaN	1639	30	0	184.32	0.106				-1	 	0	39	442.7829495743015	883.551346215403	2	442.78131103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1708	3016	4720
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4727	18.252	NaN	2300.7	30	0	859.89	0.037	+			29404	PASVIGGFLLL	11	41	362.88880534910265	NaN	0	362.8886413574219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PASVIGGFLLL_	tr|U7SKI2|U7SKI2_FUSNUSodium/glutamatesymporterOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02039PE=4SV=1	25.125986553469783	0.45344013546260314	5				NaN	NaN	0	NaN	1709	3016	4720
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4734	18.27	NaN	3355.5	30	0	951.95	0.214	+			24546	LGLNLIFLV	9	58	501.32241775738976	1000.6302825815795	2	501.3215637207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LGLNLIFLV_	ENSG00000141540|ENST00000269346|TTYH2;TTYH2|p.V190Cfs*9|2|0.39|ENSG00000141540|chr17:74237447-74237447|G/-|frameshift_variant	51.33545320467046	0.2872990594074956	5				NaN	NaN	0	NaN	1713	3019	4733
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4735	18.274	NaN	4198.8	30	0	835.08	0.106				-1	 	0	49	446.23105942918113	890.4475659251623	2	446.2298278808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1714	3019	4733
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4736	18.276	NaN	3188.7	30	0	793.67	0.106				-1	 	0	42	376.1909819358734	750.3674109385469	2	376.1902160644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1715	3019	4733
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4737	18.278	NaN	2809.5	30	0	756.63	0.106	+			4672	ATLRKDYLV	9	38	360.21411503459	1077.62051570397	3	360.2135009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATLRKDYLV_	ENSG00000123130|ENST00000379303|ACOT9;ENST00000379297.5_1_X:23722013-23724857:-|nuORF;nc|ENSG00000123130|Q9Y305-2|ACOT9;nc|ENSG00000123130|Q9Y305-3|ACOT9;nc|ENSG00000123130|Q9Y305|ACOT9	26.69291269510374	0.5537881896960711	5				NaN	NaN	0	NaN	1716	3019	4733
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4738	18.279	NaN	5115.1	30	0	2354.4	0.106			+	5961	AVLLFLVVAG	10	44	334.5505634498643	1000.6298609497928	3	334.8841552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVLLFLVVAG_	REV__GUCY2C|p.L446F|1|0.46|ENSG00000070019|chr12:14661009-14661009|G/A|missense_variant	24.519189625965996	0.6795976720565101	5				NaN	NaN	0	NaN	1717	3019	4733
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4739	18.281	NaN	1526.6	30	0	573.99	0.106	+			8742	EEFKTHHEM	9	35	594.2624170822617	1186.5102812313232	2	594.2619018554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EEFKTHHEM_	ENSG00000029363|ENST00000531224|BCLAF1;ENST00000505813.1_1_5:110284092-110284650:-|nuORF;nc|ENSG00000029363|Q9NYF8-2|BCLAF1;nc|ENSG00000029363|Q9NYF8-3|BCLAF1;nc|ENSG00000029363|Q9NYF8-4|BCLAF1	47.95952297671804	0.32689736945648856	5				NaN	NaN	0	NaN	1718	3019	4733
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4740	18.283	NaN	545.08	30	0	89.81	0.037			+	13048	GEWGDQCKCR	10	26	591.24609375	NaN	0	591.24609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GEWGDQCKCR_	REV__VWA2|p.R739Q|1|0.5|ENSG00000165816|chr10:114290333-114290333|G/A|missense_variant	19.996771675451527	0.4201028297492154	5				NaN	NaN	0	NaN	1719	3019	4733
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4752	18.309	NaN	8625.7	30	0	1887.9	0.214				-1	 	0	64	441.26491456476106	880.5152761963221	2	441.263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1728	3022	4751
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4753	18.312	NaN	4309.6	30	0	415.58	0.106			+	37689	SLSGSEQNI	9	55	467.72686203959563	933.4391711459913	2	467.7238464355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLSGSEQNI_	REV__CHSY1|p.G651Vfs*14|1|0.08|ENSG00000131873|chr15:101177845-101177846|-/A|frameshift_variant;REV__ENSG00000131873|ENST00000254190|CHSY1;REV__ENST00000543813.1_1_15:101717595-101728206:-|nuORF	56.72105179125745	0.24094814563026265	5				NaN	NaN	0	NaN	1729	3022	4751
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4754	18.314	NaN	4943.6	30	0	2940.3	0.106				-1	 	0	43	461.77790534348964	921.5412577537793	2	461.7769470214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1730	3022	4751
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4755	18.316	NaN	1193.6	30	0	137.83	0.106	+			43785	TLKNRMGHQ	9	46	542.7872924804688	NaN	0	542.7872924804688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TLKNRMGHQ_	ENSG00000169203|ENST00000550665|NPIPB12;ENSG00000169246|ENST00000542817|NPIPB3;ENSG00000183426|ENST00000328085|NPIPA1;ENSG00000183793|ENST00000360151|NPIPA5;ENSG00000183889|ENST00000381497|NPIPA9;ENSG00000185864|ENST00000682606|NPIPB4;ENSG00000198064|ENST00000697092|NPIPB13;ENSG00000214940|ENST00000525596|NPIPA8;ENSG00000214967|ENST00000530217|NPIPA7;ENSG00000224712|ENST00000531598|NPIPA3;ENSG00000233024|ENST00000427999|NPIPA9;ENSG00000234719|ENST00000399147|NPIPB2;ENSG00000243716|ENST00000424340|NPIPB5;ENSG00000254206|ENST00000698511|NPIPB11;ENSG00000254852|ENST00000529166|NPIPA2;nc|ENSG00000169246|Q92617-2|NPIPB3;nc|ENSG00000169246|Q92617-3|NPIPB3;nc|ENSG00000169246|Q92617-5|NPIPB3;nc|ENSG00000169246|Q92617-6|NPIPB3;nc|ENSG00000169246|Q92617|NPIPB3;nc|ENSG00000243716|C9JG80|NPIPB4;nc|ENSG00000254852|F8WFD2|NPIPA3	40.77816245573522	0.2702456086868081	5				NaN	NaN	0	NaN	1731	3022	4751
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4756	18.318	NaN	1312.2	30	0	145.83	0.106			+	13407	GLFPHFRP	8	45	485.7672157650745	969.5198785969491	2	485.7657775878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GLFPHFRP_	REV__ENST00000412946.6_1_13:45915702-45915750:+|nuORF;REV__ENST00000524062.5_1_13:45915702-45918542:+|nuORF	21.70233525837049	0.7917639344264583	5				NaN	NaN	0	NaN	1732	3022	4751
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4757	18.32	NaN	1674.2	30	0	251.73	0.037				-1	KVCQFPCME	9	64	571.244813508621	1140.4750740840418	2	571.7457275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_KVCQFPC(Carbamidomethyl (C))ME_	ENST00000474060.1_1_5:139917823-139918537:+|nuORF	27.882242232435846	0.5426732730940306	5				NaN	NaN	0	NaN	1733	3022	4751
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4766	18.34	NaN	5312.3	30	0	1146.4	0.214				-1	 	0	49	414.7387049908327	827.4628570484654	2	414.7376708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1739	3025	4765
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4767	18.343	NaN	3893.1	30	0	389.31	0.106	+			39365	STCQRFVEK	9	68	577.7861501992788	1153.5577474653576	2	577.784912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_STC(Carbamidomethyl (C))QRFVEK_	ENSG00000181610|ENST00000313608|MRPS23	98.58198989935565	0.04066992115528678	5				NaN	NaN	0	NaN	1740	3025	4765
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4768	18.345	NaN	2847.4	30	0	2300.7	0.106				-1	 	0	26	424.2305140650765	846.446475196953	2	424.22943115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1741	3025	4765
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4769	18.347	NaN	2372.8	30	0	268.29	0.106				-1	 	0	56	477.29347476383333	952.5723965944667	2	477.29217529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1742	3025	4765
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4770	18.349	NaN	1430.2	30	0	263.87	0.106	+			43158	TETEPSKTV	9	43	496.2505641190317	NaN	0	496.2507019042969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TETEPSKTV_	chr10:128113602-128116491|398|11.56|0.71|4.03|-|ENST00000368653|MKI67,MKI67;ENSG00000148773|ENST00000368654|MKI67;MKI67|p.L2374*|1|0.28|ENSG00000148773|chr10:128104719-128104719|A/-|frameshift_variant;MKI67|p.R3036Yfs*27|1|0.04|ENSG00000148773|chr10:128102735-128102736|-/AAAATAA|frameshift_variant;MKI67|p.S870P|1|0.03|ENSG00000148773|chr10:128109232-128109232|A/G|missense_variant;nc|ENSG00000148773|P46013-2|MKI67	40.05817265558897	0.275207446262312	5				NaN	NaN	0	NaN	1743	3025	4765
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4771	18.351	NaN	1701.3	30	0	249.06	0.106			+	37482	SLKPHHFR	8	43	341.1942443847656	NaN	0	341.1942443847656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLKPHHFR_	REV__ENSG00000188266|ENST00000388988|HYKK;REV__nc|ENSG00000188266|A2RU49-3|HYKK	31.954861631926434	1.7418937515398478	5				NaN	NaN	0	NaN	1744	3025	4765
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4772	18.352	NaN	944.98	30	0	117.61	0.035			+	28971	NSGGWVIGVP	10	47	493.2577819824219	NaN	0	493.2577819824219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NSGGWVIGVP_	REV__THE1D-int_dup348|chr2:240633210-240634743:+|3.062994120509857|0.4818669853647762|2.67|482.0|84|3|anti-sense	24.20275056022122	0.4201028297492154	5				NaN	NaN	0	NaN	1745	3025	4765
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4786	18.382	NaN	2636.6	30	0	630.87	0.214	+			48634	VTSKVLTTK	9	59	488.80692753505247	975.599302136905	2	488.80560302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTSKVLTTK_	ENSG00000167632|ENST00000438773|TRAPPC9;ENST00000521667.5_1_8:140743306-141301208:-|nuORF;nc|ENSG00000167632|Q96Q05-2|TRAPPC9;nc|ENSG00000167632|Q96Q05-3|TRAPPC9	95.81516180277367	0.04847050768394289	5				NaN	NaN	0	NaN	1756	3028	4785
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4787	18.386	NaN	3054.6	30	0	577.35	0.106	+			40942	SVFSQSGNSR	10	56	534.7584501928884	1067.5023474525767	2	534.7575073242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVFSQSGNSR_	CDC27|p.I404Sfs*15|1|0.44|ENSG00000004897|chr17:47142397-47142397|T/-|frameshift_variant;CDC27|p.P360Lfs*7|1|0.33|ENSG00000004897|chr17:47143976-47143977|-/AATTTAAA|frameshift_variant;ENSG00000004897|ENST00000066544|CDC27;ENST00000525495.6_2_17:45219385-45266538:-|nuORF;ENST00000533415.5_1_17:45198303-45266605:-|nuORF;nc|ENSG00000004897|P30260-2|CDC27	46.45678178249821	0.4896490706773647	5				NaN	NaN	0	NaN	1757	3028	4785
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4788	18.388	NaN	1089.3	30	0	194.31	0.106			+	-1	RGKMCGPFRAN	11	27	626.8054001857503	1251.5962474383005	2	626.8043212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_RGKM(Oxidation (M))CGPFRAN_	REV__ENSG00000124253|ENST00000319441|PCK1;REV__PCK1|p.N346Qfs*29|1|0.24|ENSG00000124253|chr20:57564238-57564239|-/C|frameshift_variant	19.1035232394073	0.7810393085260824	5				NaN	NaN	0	NaN	1758	3028	4785
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4789	18.389	NaN	1509	30	0	260.28	0.106			+	17530	IDNVSKGK	8	40	430.7461594935013	859.4777660538026	2	430.7449645996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IDNVSKGK_	REV__tr|U7SS02|U7SS02_FUSNUThioredoxinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01493PE=4SV=1	47.657333605630114	0.6087971902037268	5				NaN	NaN	0	NaN	1759	3028	4785
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4790	18.391	NaN	958.6	30	0	161.99	0.037			+	-1	FDKCQMSLK	9	39	586.7749765503729	NaN	0	586.7749633789062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C),Oxidation (M)	_FDKC(Carbamidomethyl (C))QM(Oxidation (M))SLK_	REV__ENSG00000069018|ENST00000513104|TRPC7;REV__ENSG00000137672|ENST00000344327|TRPC6;REV__ENSG00000138741|ENST00000379645|TRPC3;REV__nc|ENSG00000137672|Q9Y210-3|TRPC6;REV__nc|ENSG00000138741|Q13507-3|TRPC3;REV__TRPC6|p.G794Rfs*13|1|0.31|ENSG00000137672|chr11:101471212-101471213|-/T|frameshift_variant;REV__TRPC6|p.G794Vfs*8|1|0.27|ENSG00000137672|chr11:101471213-101471213|T/-|frameshift_variant;REV__TRPC6|p.V329G|1|0.11|ENSG00000137672|chr11:101491698-101491698|A/C|missense_variant	26.69291269510374	0.34280015626154364	5				NaN	NaN	0	NaN	1760	3028	4785
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4799	18.411	NaN	25845	30	0	2942.8	0.214				-1	 	0	77	502.275642956881	1002.536732980562	2	502.2745361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1766	3031	4798
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4800	18.415	NaN	2282.9	30	0	342.84	0.106				-1	HLSLRLCN	8	51	506.7701938784085	1011.5258348236171	2	506.7691345214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_HLSLRLC(Carbamidomethyl (C))N_	ENSG00000177354|ENST00000374144|C10orf71;nc|ENSG00000177354|Q711Q0-3|CEFIP	33.51558372728122	0.7005509609380386	5				NaN	NaN	0	NaN	1767	3031	4798
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4801	18.417	NaN	3354.2	30	0	980.9	0.106			+	21369	KMEPNNTIGL	10	67	558.7902507393053	1115.5659485454105	2	558.7898559570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KMEPNNTIGL_	REV__ENSG00000187612|ENST00000344514|OR5W2	67.49366992349736	0.29779660154124327	5				NaN	NaN	0	NaN	1768	3031	4798
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4802	18.419	NaN	1820.3	30	0	244.84	0.035	+			47022	VLAQLQAVR	9	59	499.312627346015	996.61070175883	2	499.3116455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VLAQLQAVR_	ENSG00000137877|ENST00000320955|SPTBN5;SPTBN5|p.A3297Gfs*48|1|0.56|ENSG00000137877|chr15:41853672-41853673|-/C|frameshift_variant	42.86426827375447	0.38666266728046506	5				NaN	NaN	0	NaN	1769	3031	4798
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4814	18.444	NaN	11369	30	0	2108.5	0.214	+			34389	RTSEIYVHR	9	77	580.8134828056285	1159.612412678057	2	580.8126831054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTSEIYVHR_	ENSG00000089737|ENST00000621632|DDX24;ENST00000555762.1_1_14:94517539-94521656:-|nuORF;nc|ENSG00000089737|Q9GZR7-2|DDX24	120.27252224102466	0.02103478360410217	5				NaN	NaN	0	NaN	1778	3034	4813
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4815	18.448	NaN	2796.2	30	0	808.7	0.106	+			43816	TLQGEHQHLP	10	39	387.19976806640625	NaN	0	387.19976806640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TLQGEHQHLP_	ENSG00000103248|ENST00000360900|MTHFSD;MTHFSD|p.P294Lfs*26|1|0.15|ENSG00000103248|chr16:86532282-86532282|G/-|frameshift_variant;nc|ENSG00000103248|Q2M296-2|MTHFSD;nc|ENSG00000103248|Q2M296-3|MTHFSD;nc|ENSG00000103248|Q2M296-4|MTHFSD	23.52269567125451	0.42010282974921537	5				NaN	NaN	0	NaN	1779	3034	4813
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4816	18.45	NaN	2443.5	30	0	325.53	0.106	+			48223	VTAVDTKRG	9	57	473.7701766005421	945.5258002678842	2	473.76904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTAVDTKRG_	ENSG00000134775|ENST00000590592|FHOD3;ENST00000589114.5_1_18:33877702-34289359:+|nuORF;ENST00000591635.5_1_18:34124550-34298500:+|nuORF;FHOD3|p.D280Rfs*29|1|0.35|ENSG00000134775|chr18:36611973-36611974|-/A|frameshift_variant;FHOD3|p.E810Rfs*8|2|0.26|ENSG00000134775|chr18:36718298-36718298|G/-|frameshift_variant;FHOD3|p.P335Qfs*63|1|0.19|ENSG00000134775|chr18:36625553-36625554|CC/-|frameshift_variant;FHOD3|p.S336Vfs*138|7|0.27|ENSG00000134775|chr18:36625553-36625553|C/-|frameshift_variant;nc|ENSG00000134775|Q2V2M9-2|FHOD3;nc|ENSG00000134775|Q2V2M9-3|FHOD3;nc|ENSG00000134775|Q2V2M9|FHOD3	29.14955571784316	0.5308295550522326	5				NaN	NaN	0	NaN	1780	3034	4813
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4817	18.451	NaN	2905.4	30	0	1323.5	0.106			+	50230	WPCQRTRLG	9	35	372.86284587911933	1115.566708237558	3	373.1963806152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_WPCQRTRLG_	REV__ENST00000382141.4_1_13:24796978-24797068:+|nuORF	32.81241826257853	0.4965981579233955	5				NaN	NaN	0	NaN	1781	3034	4813
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4818	18.453	NaN	1899	30	0	238.26	0.106	+			3326	ASMAIKNPK	9	54	480.2701721191406	NaN	0	480.2701721191406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASMAIKNPK_	ENSG00000149428|ENST00000617285|HYOU1;ENST00000533381.5_1_11:118925895-118927580:-|nuORF;ENST00000543287.5_1_11:118919950-118926831:-|nuORF;HYOU1|p.K651Rfs*46|1|0.13|ENSG00000149428|chr11:119049058-119049058|T/-|frameshift_variant;HYOU1|p.T96M|1|0.19|ENSG00000149428|chr11:119055317-119055317|G/A|missense_variant	39.252832667884924	0.27938773122138094	5				NaN	NaN	0	NaN	1782	3034	4813
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4819	18.455	NaN	4214.5	30	0	1984.9	0.106	+			40822	SVEEKLSLAQ	10	38	368.5365299958318	NaN	0	368.53668212890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVEEKLSLAQ_	EEA1|p.N1389Mfs*3|1|0.33|ENSG00000102189|chr12:92776081-92776081|T/-|frameshift_variant;ENSG00000102189|ENST00000322349|EEA1	26.69291269510374	0.4125295221340092	5				NaN	NaN	0	NaN	1783	3034	4813
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4820	18.457	NaN	961.08	30	0	235.67	0.035			+	26764	LVQAQLRAV	9	33	333.210205078125	NaN	0	333.210205078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LVQAQLRAV_	REV__ENSG00000173805|ENST00000347901|HAP1;REV__nc|ENSG00000173805|P54257-3|HAP1;REV__nc|ENSG00000173805|P54257-4|HAP1;REV__nc|ENSG00000173805|P54257|HAP1	34.172542307311794	0.30503706118289736	5				NaN	NaN	0	NaN	1784	3034	4813
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4831	18.48	NaN	12351	30	0	3161.4	0.214	+			23357	KYTPPPHHI	9	64	363.86620809988506	NaN	0	363.8660888671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KYTPPPHHI_	ENSG00000168653|ENST00000372969|NDUFS5	98.62937762414208	0.024200618960070384	5				NaN	NaN	0	NaN	1792	3037	4830
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4832	18.484	NaN	3397	30	0	593.28	0.106	+			3338	ASMPDNTAAQK	11	65	567.2673190589857	1132.5200851847712	2	567.267333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASMPDNTAAQK_	ENSG00000100345|ENST00000216181|MYH9;ENSG00000133392|ENST00000300036|MYH11;MYH9|p.I784*|1|0.07|ENSG00000100345|chr22:36304036-36304036|G/-|frameshift_variant;nc|ENSG00000100345|P35579-2|MYH9;nc|ENSG00000133392|P35749-2|MYH11;nc|ENSG00000133392|P35749-3|MYH11;nc|ENSG00000133392|P35749-4|MYH11	63.42647028704847	0.292869158926425	5				NaN	NaN	0	NaN	1793	3037	4830
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4833	18.486	NaN	3942.6	30	0	407.17	0.106	+			23356	KYTPPPHHI	9	52	545.2965185449237	1088.5784841566474	2	545.2958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KYTPPPHHI_	ENSG00000168653|ENST00000372969|NDUFS5	113.41158876095287	0.025516849225023126	5				NaN	NaN	0	NaN	1794	3037	4830
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4834	18.488	NaN	4960.3	30	0	2562.4	0.106				-1	 	0	48	334.7646882592083	667.5148235852166	2	334.76397705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1795	3037	4830
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4835	18.49	NaN	2060.4	30	0	477.23	0.106	+			23683	LASSFARR	8	51	454.2590490166854	906.5035451001709	2	454.25775146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LASSFARR_	ENST00000563117.5_1_16:20817227-20817782:-|nuORF;ENST00000565884.5_1_16:20817227-20817407:-|nuORF	42.47446043378293	0.6409579893742323	5				NaN	NaN	0	NaN	1796	3037	4830
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4836	18.491	NaN	881.65	30	0	152.79	0.106	+			24520	LGKSGHLQVN	10	42	526.7959594726562	NaN	0	526.7959594726562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LGKSGHLQVN_	ENSG00000148604|ENST00000652092|RGR;ENST00000483771.5_1_10:86008492-86018392:+|nuORF;nc|ENSG00000148604|P47804-2|RGR	37.81151784470057	0.3760215235790741	5				NaN	NaN	0	NaN	1797	3037	4830
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4837	18.493	NaN	3103.3	30	0	526.11	0.038	+			46267	VEHEKQRIL	9	44	384.55692457387136	1150.648944321814	3	384.555908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VEHEKQRIL_	ENSG00000204616|ENST00000376734|TRIM31;nc|ENSG00000204616|Q9BZY9-2|TRIM31	36.446750945000026	0.4619375763483977	5				NaN	NaN	0	NaN	1798	3037	4830
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4849	18.519	NaN	4968.6	30	0	1389.7	0.144				-1	 	0	50	350.8592902021055	1049.5560412065165	3	350.85858154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1807	3040	4848
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4860	18.544	NaN	4353.4	30	0	687.1	0.214	+			47950	VSMGHSISK	9	64	473.24569565158976	944.4768383699795	2	473.24432373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSMGHSISK_	ENSG00000186017|ENST00000452939|ZNF566;ZNF566|p.F128Lfs*25|1|0.12|ENSG00000186017|chr19:36449850-36449850|A/-|frameshift_variant;ZNF566|p.P52Q|1|0.3|ENSG00000186017|chr19:36472988-36472988|G/T|missense_variant	68.84614121027924	0.14577793175421136	5				NaN	NaN	0	NaN	1815	3043	4859
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4861	18.548	NaN	3181.1	30	0	324.45	0.106	+			17661	IEKKATATI	9	60	487.7988815112132	973.5832100892264	2	487.79736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IEKKATATI_	ENSG00000084463|ENST00000261167|WBP11;ENST00000412499.1_1_2:128007051-128007162:+|nuORF	68.84614121027924	0.14577793175421136	5				NaN	NaN	0	NaN	1816	3043	4859
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4862	18.55	NaN	3312.3	30	0	572.74	0.106			+	6433	AVWVKPSLR	9	43	352.5496186156279	1054.6270264470836	3	352.54876708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVWVKPSLR_	REV__ENSG00000169962|ENST00000339381|TAS1R3;REV__TAS1R3|p.H387Sfs*13|1|0.24|ENSG00000169962|chr1:1332688-1332689|-/T|frameshift_variant;REV__TAS1R3|p.L606Wfs*43|1|0.42|ENSG00000169962|chr1:1333711-1333711|G/-|frameshift_variant	39.252832667884924	0.4290233611298554	5				NaN	NaN	0	NaN	1817	3043	4859
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4863	18.552	NaN	1642.1	30	0	444.41	0.106	+			4346	ATGPALDNK	9	41	443.73622483160335	885.4578967300067	2	443.73480224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATGPALDNK_	ENSG00000196576|ENST00000359337|PLXNB2;PLXNB2|p.G308Vfs*83|1|0.39|ENSG00000196576|chr22:50289664-50289664|G/-|frameshift_variant;PLXNB2|p.G872Vfs*42|1|0.08|ENSG00000196576|chr22:50283401-50283401|C/-|frameshift_variant;PLXNB2|p.L1362Rfs*32|1|0.1|ENSG00000196576|chr22:50280578-50280579|CA/-|frameshift_variant;PLXNB2|p.V873Cfs*66|1|0.2|ENSG00000196576|chr22:50283400-50283401|-/C|frameshift_variant;PLXNB2|p.V928Cfs*3|1|0.71|ENSG00000196576|chr22:50283084-50283084|C/-|frameshift_variant	62.107414245175825	0.1960472003779324	5				NaN	NaN	0	NaN	1818	3043	4859
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4864	18.553	NaN	2024	30	0	328.91	0.106				-1	 	0	56	503.78871571678025	1005.5628785003605	2	503.78759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1819	3043	4859
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4865	18.555	NaN	1328	30	0	113.98	0.106			+	22350	KTGRPLSQP	9	53	492.28605432558714	982.5575557179743	2	492.2849426269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KTGRPLSQP_	REV__ENSG00000167580|ENST00000199280|AQP2	47.95952297671804	0.32689736945648856	5				NaN	NaN	0	NaN	1820	3043	4859
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4866	18.557	NaN	823.67	30	0	113.6	0.035			+	27267	MEWGVSYAV	9	34	521.2394409179688	NaN	0	521.2394409179688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MEWGVSYAV_	REV__IGSF8|p.A339V|1|0.34|ENSG00000162729|chr1:160093220-160093220|G/A|missense_variant	24.20275056022122	0.35506675290109213	5				NaN	NaN	0	NaN	1821	3043	4859
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4879	18.584	NaN	234290	30	0	41207	0.214	+			3005	ASFDKAKLK	9	104	336.5348018541873	1006.582576162762	3	336.53436279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASFDKAKLK_	ENSG00000034510|ENST00000233143|TMSB10	56.72105179125745	0.24094814563026265	5				NaN	NaN	0	NaN	1831	3046	4878
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4880	18.588	NaN	67548	30	0	26422	0.106				-1	 	0	75	504.29866172145347	1006.582770509707	2	504.29791259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1832	3046	4878
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4881	18.59	NaN	4117.7	30	0	407.12	0.106	+			39447	STEKIYIRK	9	65	569.3358154296875	NaN	0	569.3358154296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STEKIYIRK_	ENSG00000120798|ENST00000333003|NR2C1;ENSG00000177463|ENST00000425241|NR2C2;ENST00000475707.5_1_3:15045421-15079667:+|nuORF;nc|ENSG00000120798|P13056-2|NR2C1;nc|ENSG00000120798|P13056-3|NR2C1;nc|ENSG00000177463|P49116-2|NR2C2;NR2C2|p.F563Lfs*10|1|0.4|ENSG00000177463|chr3:15042899-15042899|T/-|frameshift_variant	55.08391021199286	0.17165699430885212	5				NaN	NaN	0	NaN	1833	3046	4878
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4882	18.592	NaN	4428.7	30	0	1853.2	0.106	+			14445	GTATTMVSK	9	50	448.2310791015625	NaN	0	448.2310791015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTATTMVSK_	ENSG00000204217|ENST00000374580|BMPR2	126.24258497203832	0.0011674249988053026	5				NaN	NaN	0	NaN	1834	3046	4878
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4883	18.593	NaN	2360.3	30	0	165.93	0.106	+			40259	STSLLGQKK	9	51	481.2872619628906	NaN	0	481.2872619628906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STSLLGQKK_	ENSG00000115524|ENST00000335508|SF3B1;nc|ENSG00000115524|O75533-2|SF3B1;SF3B1|p.F815Lfs*19|1|0.14|ENSG00000115524|chr2:197401451-197401451|A/-|frameshift_variant	74.25504064058377	0.09106938647426577	5				NaN	NaN	0	NaN	1835	3046	4878
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4884	18.595	NaN	1821.8	30	0	249.77	0.034	+			47859	VSLGHSVSK	9	50	457.2584228515625	NaN	0	457.2584228515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VSLGHSVSK_	nc|ENSG00000198182|Q96SK3-3|ZNF607	88.17693792209575	0.04527150213038833	5				NaN	NaN	0	NaN	1836	3046	4878
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4885	18.596	NaN	1288.5	30	0	223.04	0.139			+	-1	CSCSTVRCRDF	11	41	464.193359375	NaN	0	464.193359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))SC(Carbamidomethyl (C))STVRCRDF_	REV__ENSG00000214655|ENST00000604729|ZSWIM8;REV__nc|ENSG00000214655|A7E2V4-2|ZSWIM8;REV__nc|ENSG00000214655|A7E2V4-3|ZSWIM8;REV__nc|ENSG00000214655|A7E2V4-4|ZSWIM8;REV__nc|ENSG00000214655|A7E2V4-5|ZSWIM8;REV__nc|ENSG00000214655|A7E2V4|ZSWIM8;REV__ZSWIM8|p.P689Lfs*46|1|0.15|ENSG00000214655|chr10:73792600-73792600|C/-|frameshift_variant;REV__ZSWIM8|p.R532Pfs*6|1|0.14|ENSG00000214655|chr10:73792129-73792130|-/C|frameshift_variant	22.561587123415745	0.456735970842152	5				NaN	NaN	0	NaN	1837	3046	4878
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4907	18.647	NaN	104230	30	0	46248	0.214	+			36514	SFDKAKLK	8	100	468.78002495357913	935.5454969739583	2	468.7789611816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SFDKAKLK_	CON__P21752;ENSG00000034510|ENST00000233143|TMSB10	139.97047562133406	0.25797680915057813	5				NaN	NaN	0	NaN	1853	3052	4906
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4908	18.65	NaN	36628	30	0	16947	0.106				-1	 	0	72	425.2641887212377	848.5138245092754	2	425.2630310058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1854	3052	4906
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4909	18.652	NaN	25935	30	0	5751.6	0.106			+	24849	LKCGAEKLK	9	70	330.53124333054257	988.5719005918277	3	330.5306091308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LKCGAEKLK_	REV__ENSG00000124701|ENST00000244669|APOBEC2	56.72105179125745	0.24094814563026265	5				NaN	NaN	0	NaN	1855	3052	4906
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4910	18.654	NaN	24512	30	0	8573.8	0.106	+			44160	TQNYPPAIK	9	70	516.2781433217895	1030.5417337103788	2	516.27783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TQNYPPAIK_	ENSG00000105605|ENST00000391767|CACNG7	69.6276240434122	0.14239879520340665	5				NaN	NaN	0	NaN	1856	3052	4906
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4911	18.656	NaN	8176.6	30	0	3020.9	0.106			+	18143	ILKNAQSSGN	10	41	344.5206870988877	1030.5402318968631	3	344.51971435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ILKNAQSSGN_	REV__ENSG00000134900|ENST00000376052|TPP2;REV__nc|ENSG00000134900|P29144|TPP2;REV__TPP2|p.F663Lfs*13|1|0.13|ENSG00000134900|chr13:102640342-102640342|T/-|frameshift_variant;REV__TPP2|p.F722Lfs*12|1|0.06|ENSG00000134900|chr13:102643366-102643367|-/AAACTTA|frameshift_variant	20.94693142431847	0.7087701759873708	5				NaN	NaN	0	NaN	1857	3052	4906
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4912	18.658	NaN	513.88	30	0	87.659	0.035	+			29675	PGRAAVPPW	9	27	317.51175322999995	NaN	0	317.5119323730469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PGRAAVPPW_	ENSG00000121270|ENST00000356608|ABCC11;ENST00000567385.5_1_16:48244807-48265838:-|nuORF;nc|ENSG00000121270|Q96J66-2|ABCC11	19.359975847455235	0.3714571876404798	5				NaN	NaN	0	NaN	1858	3052	4906
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4923	18.681	NaN	3320	30	0	517.03	0.214				-1	CKSCGAHFAN	10	65	547.7301557507162	1093.4457585682323	2	547.7283935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_CKSC(Carbamidomethyl (C))GAHFAN_	ENSG00000092871|ENST00000394597|RFFL;nc|ENSG00000092871|Q8WZ73-2|RFFL;nc|ENSG00000092871|Q8WZ73-3|RFFL	62.107414245175825	0.3466735403679669	5				NaN	NaN	0	NaN	1866	3055	4922
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4924	18.685	NaN	6128.8	30	0	1211.8	0.106			+	35655	SCTEKTKK	8	61	491.25490426276133	980.4952555923227	2	491.2532958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SC(Carbamidomethyl (C))TEKTKK_	REV__ENSG00000274443|ENST00000624510|C8orf89	58.78195531508484	0.5138399468736706	5				NaN	NaN	0	NaN	1867	3055	4922
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4925	18.687	NaN	3304.3	30	0	622.3	0.106			+	25922	LSGSTDVEF	9	50	477.7237800581427	953.4330071830855	2	477.7222900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSGSTDVEF_	REV__ENST00000216297.6_1_14:21852141-21852234:-|nuORF	53.351449002276354	0.2690372970092375	5				NaN	NaN	0	NaN	1868	3055	4922
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4926	18.688	NaN	3176.6	30	0	747.4	0.106			+	29027	NSSSTTSAPES	11	50	534.2294432736265	1066.444333614053	2	534.2288208007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NSSSTTSAPES_	REV__nc|ENSG00000117625|Q9P2K3-2|RCOR3	44.377184641726394	0.49804979881800077	5				NaN	NaN	0	NaN	1869	3055	4922
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4927	18.69	NaN	1419.6	30	0	260.82	0.106			+	45195	TVNNVRLEQ	9	50	536.7907830000598	NaN	0	536.7913208007812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TVNNVRLEQ_	REV__ENSG00000157106|ENST00000446231|SMG1;REV__ENST00000523028.5_1_16:21912870-21927266:-|nuORF;REV__SMG1|p.A3214Rfs*29|1|0.06|ENSG00000157106|chr16:18828132-18828133|-/ATTTTCT|frameshift_variant	49.536043120802724	0.20989033510253738	5				NaN	NaN	0	NaN	1870	3055	4922
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4928	18.692	NaN	780.18	30	0	102.11	0.106			+	6972	CPSYMCKR	8	38	494.21482268277737	986.4150924323548	2	494.2134094238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_CPSYMCKR_	REV__ENST00000477575.1_1_10:99237043-99237649:-|nuORF	18.324413293986947	0.7971860551947066	5				NaN	NaN	0	NaN	1871	3055	4922
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4929	18.694	NaN	961.63	30	0	332.84	0.036	+			26866	LWAYVTIGE	9	32	526.2784423828125	NaN	0	526.2784423828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LWAYVTIGE_	ENSG00000102313|ENST00000218436|ITIH6;ITIH6|p.Q800Rfs*102|1|0.21|ENSG00000102313|chrX:54757676-54757676|G/-|frameshift_variant	18.324413293986947	0.3749620627292244	5				NaN	NaN	0	NaN	1872	3055	4922
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4943	18.723	NaN	2681.7	30	0	279.63	0.214			+	26159	LSQRTEPTK	9	59	530.2947938174037	1058.5750347016074	2	530.2935791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSQRTEPTK_	REV__ENST00000360870.9_3_2:179612299-179612374:-|nuORF	75.04331003522576	0.118981335847003	5				NaN	NaN	0	NaN	1883	3058	4942
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4944	18.727	NaN	702.92	30	0	51.253	0.106	+			11322	FLAIIHVL	8	42	463.29541015625	NaN	0	463.29541015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FLAIIHVL_	SYNE2|p.A222V|1|0.42|ENSG00000054654|chr14:63954793-63954793|C/T|missense_variant	24.504012794735996	1.7418937515398478	5				NaN	NaN	0	NaN	1884	3058	4942
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4945	18.729	NaN	2178.8	30	0	213.29	0.106				-1	LGVCRRGAS	9	56	488.2601578809849	974.5057628287698	2	488.2590026855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LGVC(Carbamidomethyl (C))RRGAS_	ENST00000358746.6_1_5:94884403-94890691:-|nuORF	35.61828744233558	0.47037581924408073	5				NaN	NaN	0	NaN	1885	3058	4942
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4946	18.731	NaN	1220	30	0	102.05	0.106			+	39037	SSSPAIATVSP	11	44	508.76678466796875	NaN	0	508.76678466796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSSPAIATVSP_	REV__POM121|p.T753I|1|0.23|ENSG00000196313|chr7:72942251-72942251|C/T|missense_variant	26.69291269510374	0.4464570093767436	5				NaN	NaN	0	NaN	1886	3058	4942
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4947	18.733	NaN	1909.9	30	0	343.54	0.106	+			29604	PFSPLSNL	8	45	437.7364296874337	873.4583064416674	2	437.73516845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PFSPLSNL_	ENST00000515007.6_1_5:77784595-77784718:-|nuORF	66.42927471994793	0.4381325844043345	5				NaN	NaN	0	NaN	1887	3058	4942
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4948	18.734	NaN	1121.9	30	0	133.91	0.036	+			9814	EPGAPPPYSAP	11	41	541.7625732421875	NaN	0	541.7625732421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EPGAPPPYSAP_	ENSG00000127528|ENST00000248071|KLF2	25.57405402267927	0.45144328854727944	5				NaN	NaN	0	NaN	1888	3058	4942
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4949	18.735	NaN	756.79	30	0	73.088	0.14	+			6066	AVMPPGRSR	9	48	485.76727384386527	969.5199947545306	2	485.7657470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AVMPPGRSR_	ENSG00000131037|ENST00000201647|EPS8L1;EPS8L1|p.D510Efs*3|1|0.38|ENSG00000131037|chr19:55086071-55086072|AC/-|frameshift_variant;EPS8L1|p.G206Afs*54|1|0.23|ENSG00000131037|chr19:55081330-55081336|GCGGGGC/-|frameshift_variant;nc|ENSG00000131037|Q8TE68-3|EPS8L1	29.14955571784316	0.5308295550522326	5				NaN	NaN	0	NaN	1889	3058	4942
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4964	18.768	NaN	6389.8	30	0	917.33	0.215				-1	 	0	58	451.7336170272886	901.4526811213772	2	451.7325439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1901	3061	4963
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4965	18.772	NaN	2987.8	30	0	795.39	0.106				-1	LSIADPMLAL	10	49	353.8644104003906	NaN	0	353.8644104003906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LSIADPM(Oxidation (M))LAL_	tr|U7T4A5|U7T4A5_FUSNUBenzoyl-CoAreductase,subunitCOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00400PE=3SV=1	37.81151784470057	0.3760215235790741	5				NaN	NaN	0	NaN	1902	3061	4963
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4966	18.774	NaN	3545.1	30	0	2329.1	0.106			+	-1	MCNMGRASRL	10	36	404.5190569694636	1210.5353415085908	3	404.8523254394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))C(Carbamidomethyl (C))NMGRASRL_	REV__ENST00000388747.8_1_9:130692031-130693066:-|nuORF	16.71738777980365	0.7315012293134124	5				NaN	NaN	0	NaN	1903	3061	4963
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4967	18.776	NaN	3144.4	30	0	1124.6	0.106	+			9057	EGGGFLGRKK	10	42	350.20231703772885	1047.5851217133866	3	350.2015380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EGGGFLGRKK_	ENSG00000136636|ENST00000259154|KCTD3;nc|ENSG00000136636|Q9Y597-2|KCTD3;nc|ENSG00000136636|Q9Y597-3|KCTD3	27.047317107675042	0.6589519614906109	5				NaN	NaN	0	NaN	1904	3061	4963
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4968	18.777	NaN	540.73	30	0	133.4	0.106			+	27730	MQLLEDNYW	9	30	606.2733764648438	NaN	0	606.2733764648438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MQLLEDNYW_	REV__EDEM3|p.F658Lfs*4|1|0.35|ENSG00000116406|chr1:184708216-184708216|A/-|frameshift_variant;REV__EDEM3|p.K381Nfs*22|2|0.29|ENSG00000116406|chr1:184719180-184719180|T/-|frameshift_variant;REV__ENSG00000116406|ENST00000318130|EDEM3;REV__ENST00000474725.5_1_1:184690416-184706818:-|nuORF;REV__nc|ENSG00000116406|Q9BZQ6-2|EDEM3	12.811709888998246	0.3936198799427492	5				NaN	NaN	0	NaN	1905	3061	4963
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4969	18.779	NaN	1014.1	30	0	158.2	0.038			+	-1	SCYSRRNHN	9	34	398.513916015625	NaN	0	398.513916015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_SC(Carbamidomethyl (C))YSRRNHN_	REV__ENST00000395159.6_2_14:58875544-58875700:-|nuORF	24.519189625965996	0.35377483217337163	5				NaN	NaN	0	NaN	1906	3061	4963
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4970	18.78	NaN	1548.7	30	0	302.46	0.14	+			41757	SVSLPVRKK	9	52	507.32795623268356	1012.6413595321671	2	507.82879638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVSLPVRKK_	ENSG00000102384|ENST00000682095|CENPI;nc|ENSG00000102384|Q92674-2|CENPI	66.42927471994793	0.16001998865088202	5				NaN	NaN	0	NaN	1907	3061	4963
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4983	18.809	NaN	10498	30	0	1292.2	0.214			+	-1	LCNSSSSL	8	71	434.1970254434265	866.3794979536531	2	434.1956481933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_LC(Carbamidomethyl (C))NSSSSL_	REV__ENSG00000074047|ENST00000361492|GLI2;REV__ENST00000438299.5_1_2:121728002-121748192:+|nuORF;REV__ENST00000452692.5_1_2:121728002-121748192:+|nuORF;REV__GLI2|p.R1387Lfs*143|1|0.1|ENSG00000074047|chr2:120990074-120990074|G/-|frameshift_variant;REV__nc|ENSG00000074047|P10070-1|GLI2;REV__nc|ENSG00000074047|P10070-2|GLI2;REV__nc|ENSG00000074047|P10070-3|GLI2;REV__nc|ENSG00000074047|P10070-4|GLI2;REV__nc|ENSG00000074047|P10070|GLI2	108.08749611321984	0.24621691167378246	5				NaN	NaN	0	NaN	1917	3064	4982
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4984	18.813	NaN	5658.3	30	0	832.26	0.106				-1	 	0	61	472.2707401175875	942.526927301975	2	472.26959228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1918	3064	4982
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4985	18.815	NaN	1181.8	30	0	196.57	0.106	+			25819	LSDEIQVQ	8	48	466.241300262301	930.4680475914021	2	466.2398681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSDEIQVQ_	ENSG00000132182|ENST00000254508|NUP210	42.396135135203025	0.6414440140393314	5				NaN	NaN	0	NaN	1919	3064	4982
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4986	18.816	NaN	2224.9	30	0	247.29	0.106			+	-1	WIECANGN	8	51	482.20287382485435	962.3911947165087	2	482.2015686035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_WIEC(Carbamidomethyl (C))ANGN_	REV__ENSG00000198542|ENST00000376180|ITGBL1;REV__nc|ENSG00000198542|O95965-2|ITGBL1;REV__nc|ENSG00000198542|O95965-3|ITGBL1	31.954861631926434	0.7126016770032289	5				NaN	NaN	0	NaN	1920	3064	4982
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4987	18.818	NaN	1202.8	30	0	192.92	0.106			+	21357	KMALELDEKQ	10	54	602.816716946853	1203.618880960506	2	602.81640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KMALELDEKQ_	REV__ENSG00000072786|ENST00000176763|STK10	43.41853373365257	0.517645004642704	5				NaN	NaN	0	NaN	1921	3064	4982
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4988	18.82	NaN	1104.8	30	0	357.64	0.106	+			12081	GAAKKPKK	8	35	414.2775658448022	826.5405787564044	2	414.2764892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GAAKKPKK_	ENSG00000124575|ENST00000244534|H1-3;ENSG00000168298|ENST00000304218|H1-4;ENSG00000187837|ENST00000343677|H1-2;REV__ENSG00000187837|ENST00000343677|H1-2	35.200714571348534	0.6875396545722289	5				NaN	NaN	0	NaN	1922	3064	4982
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	4989	18.822	NaN	1074.6	30	0	174.86	0.035				-1	 	0	43	518.7520784974512	1035.4896040617023	2	518.7522583007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1923	3064	4982
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5003	18.851	NaN	12003	30	0	1223.8	0.214				-1	 	0	73	506.7759397741141	1011.5373266150282	2	506.77496337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1934	3067	5002
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5004	18.855	NaN	1554.8	30	0	253.24	0.106				-1	CTGRLHMM	8	54	490.7085800219917	979.4026071107834	2	490.7070007324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Oxidation (M)	_CTGRLHM(Oxidation (M))M(Oxidation (M))_	KCNB1|p.R100C|1|0.26|ENSG00000158445|chr20:49482183-49482183|G/A|missense_variant	40.5726180659479	0.6527593143185008	5				NaN	NaN	0	NaN	1935	3067	5002
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5005	18.857	NaN	1928.4	30	0	262.14	0.106	+			20142	KEKPEEESL	9	67	544.7777535195701	NaN	0	544.7777709960938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEKPEEESL_	ENSG00000148396|ENST00000684901|SEC16A;nc|ENSG00000148396|O15027-2|SEC16A;nc|ENSG00000148396|O15027-3|SEC16A;nc|ENSG00000148396|O15027-4|SEC16A;nc|ENSG00000148396|O15027-5|SEC16A;SEC16A|p.P2155Hfs*25|1|0.25|ENSG00000148396|chr9:136447664-136447664|G/-|frameshift_variant	85.16082228582465	0.053699699744190164	5				NaN	NaN	0	NaN	1936	3067	5002
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5006	18.859	NaN	2066.6	30	0	792.79	0.106			+	9451	EKLRMEELK	9	49	588.3279418945312	NaN	0	588.3279418945312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EKLRMEELK_	REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-10|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-13|TTN;REV__nc|ENSG00000155657|Q8WZ42-2|TTN;REV__nc|ENSG00000155657|Q8WZ42-3|TTN;REV__nc|ENSG00000155657|Q8WZ42-4|TTN;REV__nc|ENSG00000155657|Q8WZ42-5|TTN;REV__nc|ENSG00000155657|Q8WZ42-7|TTN;REV__nc|ENSG00000155657|Q8WZ42-8|TTN;REV__nc|ENSG00000155657|Q8WZ42-9|TTN;REV__nc|ENSG00000155657|Q8WZ42|TTN;REV__TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;REV__TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;REV__TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;REV__TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;REV__TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant	40.05817265558897	0.275207446262312	5				NaN	NaN	0	NaN	1937	3067	5002
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5007	18.861	NaN	2026.7	30	0	308.92	0.106	+			40001	STMSACASTAR	11	61	571.751253194938	1141.487953456676	2	571.7505493164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_STMSAC(Carbamidomethyl (C))ASTAR_	ENST00000566749.5_1_16:30094754-30094823:+|nuORF	75.65223720490533	0.18861880313260296	5				NaN	NaN	0	NaN	1938	3067	5002
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5008	18.862	NaN	1687.6	30	0	307.52	0.036	+			10932	FDPPQEDGVL	10	58	558.7654649862347	1115.5163770392694	2	558.764892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FDPPQEDGVL_	ENST00000484202.2_1_1:249104790-249105009:-|nuORF	35.15202426646627	0.5927656479315102	5				NaN	NaN	0	NaN	1939	3067	5002
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5009	18.863	NaN	1098.8	30	0	272.82	0.143			+	27430	MLDVFEKL	8	28	332.181884765625	NaN	0	332.181884765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MLDVFEKL_	REV__ENSG00000129151|ENST00000263182|BBOX1	21.70233525837049	1.7418937515398478	5				NaN	NaN	0	NaN	1940	3067	5002
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5022	18.892	NaN	9711.7	30	0	1287.1	0.214			+	20325	KEQVIAVYP	9	73	523.7968544916112	1045.5791560500222	2	523.79638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEQVIAVYP_	REV__ENSG00000163312|ENST00000295488|HELQ;REV__HELQ|p.E864Gfs*7|1|0.07|ENSG00000163312|chr4:83427648-83427649|-/GC|frameshift_variant;REV__HELQ|p.F782Lfs*9|1|0.13|ENSG00000163312|chr4:83429696-83429696|A/-|frameshift_variant;REV__HELQ|p.K561Rfs*8|1|0.45|ENSG00000163312|chr4:83439989-83439989|T/-|frameshift_variant	102.7733458925114	0.03637199559902695	5				NaN	NaN	0	NaN	1950	3070	5021
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5023	18.896	NaN	10407	30	0	4340.8	0.106				-1	 	0	54	417.24092078026405	832.4672886273281	2	417.2398681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1951	3070	5021
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5024	18.898	NaN	4189.6	30	0	365.58	0.106	+			4752	ATMQGDREQLK	11	75	638.8206215093176	1275.626690085435	2	638.8195190429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATMQGDREQLK_	ADNP|p.Y1033Mfs*48|1|0.33|ENSG00000101126|chr20:50891618-50891618|G/-|frameshift_variant;ENSG00000101126|ENST00000621696|ADNP	152.67163325587376	6.606338268086461E-05	5				NaN	NaN	0	NaN	1952	3070	5021
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5025	18.9	NaN	2683.9	30	0	311.54	0.106			+	44334	TSGIALNYWK	10	62	576.8051722951096	1151.5957916570192	2	576.804443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TSGIALNYWK_	REV__ENSG00000106927|ENST00000265132|AMBP	61.691277971877994	0.35045824941635534	5				NaN	NaN	0	NaN	1953	3070	5021
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5026	18.901	NaN	3012.3	30	0	425.39	0.106	+			39990	STMPHTSGMNR	11	53	609.7725171168686	1217.530481300537	2	609.7708740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STMPHTSGMNR_	ENSG00000150907|ENST00000379561|FOXO1	86.88156770896713	0.11154061753057586	5				NaN	NaN	0	NaN	1954	3070	5021
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5027	18.903	NaN	3310	30	0	688.12	0.031				-1	 	0	49	364.7067904904551	727.3990280477102	2	364.7060852050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1955	3070	5021
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5028	18.904	NaN	1899.2	30	0	379.6	0.142	+			4738	ATMPDNTAAQK	11	51	574.2752282629679	1146.5359035927356	2	574.2745361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATMPDNTAAQK_	ENSG00000105357|ENST00000642316|MYH14;MYH14|p.G549Wfs*8|1|0.23|ENSG00000105357|chr19:50250519-50250520|-/C|frameshift_variant;MYH14|p.L1950Sfs*14|1|0.34|ENSG00000105357|chr19:50309646-50309646|C/-|frameshift_variant;MYH14|p.M997*|1|0.19|ENSG00000105357|chr19:50271483-50271483|A/-|frameshift_variant;MYH14|p.P548Lfs*25|2|0.32|ENSG00000105357|chr19:50250520-50250520|C/-|frameshift_variant;MYH14|p.R929Gfs*44|1|0.38|ENSG00000105357|chr19:50268237-50268237|G/-|frameshift_variant;nc|ENSG00000105357|Q7Z406-4|MYH14;nc|ENSG00000105357|Q7Z406-5|MYH14;nc|ENSG00000105357|Q7Z406-6|MYH14;nc|ENSG00000105357|Q7Z406|MYH14	35.495647763667336	0.6174708002554854	5				NaN	NaN	0	NaN	1956	3070	5021
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5042	18.935	NaN	64358	30	0	15452	0.214				-1	 	0	98	459.78547373751434	917.5563945418287	2	459.7843322753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1967	3073	5041
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5043	18.938	NaN	25615	30	0	6578.1	0.106			+	19467	KASKNLFVT	9	69	336.5348018541873	1006.582576162762	3	336.53424072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KASKNLFVT_	REV__nc|ENSG00000211810|P04437|TRAV29DV5	35.61828744233558	0.47037581924408073	5				NaN	NaN	0	NaN	1968	3073	5041
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5044	18.94	NaN	7470.8	30	0	2555.4	0.106				-1	 	0	64	504.29866172145347	1006.582770509707	2	504.2976989746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1969	3073	5041
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5045	18.942	NaN	2575.9	30	0	452.43	0.106	+			6717	CADNTGAKNL	10	60	532.246368592465	1062.47818425173	2	532.2459716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_C(Carbamidomethyl (C))ADNTGAKNL_	ENSG00000125691|ENST00000479035|RPL23;ENST00000584912.5_1_17:37008851-37009963:-|nuORF	72.87924865735499	0.25379688738724415	5				NaN	NaN	0	NaN	1970	3073	5041
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5046	18.944	NaN	4143.3	30	0	283.31	0.106				-1	YVECRQCTQRE	11	81	736.3260144408805	1470.637475948561	2	736.3242797851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_YVEC(Carbamidomethyl (C))RQCTQRE_	ENSG00000143816|ENST00000272164|WNT9A	35.15202426646627	0.6210751305041943	5				NaN	NaN	0	NaN	1971	3073	5041
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5047	18.946	NaN	3828.2	30	0	895.71	0.034				-1	 	0	58	486.7603370643427	971.5061211954854	2	486.7593688964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	1972	3073	5041
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5048	18.946	NaN	1491	30	0	160.94	0.141			+	8948	EEYRAMPVV	9	56	547.2702970209644	1092.5260411087288	2	547.269287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EEYRAMPVV_	REV__ENST00000574429.1_1_17:6544387-6544621:+|nuORF	55.50420428727701	0.2510918378945873	5				NaN	NaN	0	NaN	1973	3073	5041
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5066	18.986	NaN	10008	30	0	2215.9	0.211				-1	HAKDMLQLWCH	11	75	699.3253646585366	1396.6361763838731	2	699.3238525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_HAKDM(Oxidation (M))LQLWCH_	ENSG00000214897|ENST00000445091|PNMA6E	36.446750945000026	0.6065623449959539	5				NaN	NaN	0	NaN	1988	3076	5065
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5067	18.989	NaN	2152	30	0	276.06	0.106	+			38649	SSIEKTISK	9	59	496.7848815917969	NaN	0	496.7848815917969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSIEKTISK_	nc|ENSG00000211892|P01861-1|IGHG4;nc|ENSG00000211892|P01861|IGHG4	56.632244143249146	0.1636824227100298	5				NaN	NaN	0	NaN	1989	3076	5065
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5068	18.991	NaN	4827.1	30	0	576.53	0.106	+			34173	RTAVYSLHK	9	64	358.874135166685	1073.600576100255	3	358.8732604980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RTAVYSLHK_	ENSG00000138382|ENST00000260953|METTL5	55.08391021199286	0.2545954270840753	5				NaN	NaN	0	NaN	1990	3076	5065
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5069	18.993	NaN	941.16	30	0	184.83	0.106	+			44508	TSSSTSGSSDK	11	47	522.2279048506956	1042.4412567681911	2	522.22705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TSSSTSGSSDK_	ENSG00000076242|ENST00000231790|MLH1;nc|ENSG00000076242|P40692-2|MLH1;nc|ENSG00000076242|P40692-3|MLH1	23.52269567125451	0.7430573033454468	5				NaN	NaN	0	NaN	1991	3076	5065
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5070	18.995	NaN	1650.6	30	0	795.99	0.106	+			36648	SGLLLHGPPG	10	42	474.26837158203125	NaN	0	474.26837158203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SGLLLHGPPG_	ENSG00000124587|ENST00000304611|PEX6;nc|ENSG00000124587|Q13608-3|PEX6	37.15910966729921	0.3781637092648983	5				NaN	NaN	0	NaN	1992	3076	5065
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5071	18.996	NaN	2404.8	30	0	482.66	0.034	+			12459	GEDGSGKTTL	10	54	482.7337854415056	963.4530179498112	2	482.7324523925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GEDGSGKTTL_	ENSG00000135720|ENST00000258198|DYNC1LI2;nc|ENSG00000135720|O43237-2|DYNC1LI2	89.02883481214508	0.13663399911061233	5				NaN	NaN	0	NaN	1993	3076	5065
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5072	18.997	NaN	1552.1	30	0	373.23	0.143			+	46258	VEGARFLKW	9	37	369.2091057328254	NaN	0	369.2090759277344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VEGARFLKW_	REV__DENND2C|p.N406Kfs*11|1|0.29|ENSG00000175984|chr1:114621904-114621905|-/T|frameshift_variant;REV__DENND2C|p.V827Cfs*15|1|0.35|ENSG00000175984|chr1:114587905-114587906|-/A|frameshift_variant;REV__ENSG00000175984|ENST00000393274|DENND2C;REV__ENST00000481894.1_1_1:115138166-115167938:-|nuORF;REV__nc|ENSG00000175984|Q68D51-2|DENND2C	19.996771675451527	0.3693019437812985	5				NaN	NaN	0	NaN	1994	3076	5065
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5085	19.027	NaN	3106.3	30	0	468.18	0.214	+			15698	GVNDAPALKK	10	68	506.79375723908953	1011.5729615449791	2	506.79290771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVNDAPALKK_	ATP2A2|p.I1027Cfs*4|1|0.37|ENSG00000174437|chr12:110346394-110346395|-/TGTGCTGCTCATAATGCCCCTGG|frameshift_variant;ENSG00000074370|ENST00000397041|ATP2A3;ENSG00000174437|ENST00000539276|ATP2A2;ENSG00000196296|ENST00000395503|ATP2A1;nc|ENSG00000074370|Q93084-1|ATP2A3;nc|ENSG00000074370|Q93084-3|ATP2A3;nc|ENSG00000074370|Q93084-4|ATP2A3;nc|ENSG00000074370|Q93084-5|ATP2A3;nc|ENSG00000074370|Q93084-6|ATP2A3;nc|ENSG00000074370|Q93084-7|ATP2A3;nc|ENSG00000174437|P16615-2|ATP2A2;nc|ENSG00000174437|P16615-3|ATP2A2;nc|ENSG00000174437|P16615-4|ATP2A2;nc|ENSG00000174437|P16615-5|ATP2A2;nc|ENSG00000196296|O14983-3|ATP2A1;nc|ENSG00000196296|O14983|ATP2A1;tr|U7STP1|U7STP1_FUSNUP-typeCa(2+)transporterOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01417PE=4SV=1	96.0336014099291	0.09653029772959643	5				NaN	NaN	0	NaN	2004	3079	5084
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5086	19.03	NaN	1768.1	30	0	434.51	0.106	+			6180	AVQLPRATH	9	56	496.78720634394057	991.5598597546812	2	497.2896728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVQLPRATH_	ENSG00000161010|ENST00000292586|MRNIP;nc|ENSG00000161010|Q6NTE8-3|MRNIP	30.503639358989545	0.5181749237905803	5				NaN	NaN	0	NaN	2005	3079	5084
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5087	19.032	NaN	997.94	30	0	82.92	0.106	+			47579	VRLTCHAR	8	51	478.2645135056128	954.5144740780256	2	478.26324462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VRLTCHAR_	ENSG00000188487|ENST00000379556|INSC;nc|ENSG00000188487|Q1MX18-4|INSC;nc|ENSG00000188487|Q1MX18-5|INSC;nc|ENSG00000188487|Q1MX18-6|INSC;nc|ENSG00000188487|Q1MX18|INSC	44.116797842482775	0.6307669463330267	5				NaN	NaN	0	NaN	2006	3079	5084
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5088	19.034	NaN	2384.8	30	0	313.78	0.106			+	9998	ERLQEVMEG	9	63	545.7612974553911	1089.508041977582	2	545.760498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ERLQEVMEG_	REV__ENSG00000189350|ENST00000379558|TOGARAM2;REV__ENST00000475900.1_1_2:29256310-29268401:+|nuORF;REV__nc|ENSG00000189350|Q6ZUX3-2|TOGARAM2;REV__nc|ENSG00000189350|Q6ZUX3-3|TOGARAM2	77.31757898189308	0.1091473830098891	5				NaN	NaN	0	NaN	2007	3079	5084
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5089	19.036	NaN	1161.1	30	0	211.3	0.106	+			21584	KPHPSPTSLS	10	47	525.7846069335938	NaN	0	525.7846069335938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KPHPSPTSLS_	ENSG00000122547|ENST00000242108|EEPD1	39.252832667884924	0.37128895876774715	5				NaN	NaN	0	NaN	2008	3079	5084
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5090	19.038	NaN	1146.1	30	0	195.1	0.106	+			45774	VAGAFPLGL	9	38	422.74907048134037	843.4835880294808	2	422.7479553222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VAGAFPLGL_	ENSG00000215474|ENST00000425639|SKOR2	60.403631409065575	0.21025000616765316	5				NaN	NaN	0	NaN	2009	3079	5084
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5091	19.039	NaN	1177.7	30	0	401.25	0.033	+			43372	TGEPWPSI	8	37	443.716682376782	NaN	0	443.7164001464844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TGEPWPSI_	ENSG00000147613|ENST00000276616|PSKH2	31.954861631926434	1.7418937515398478	5				NaN	NaN	0	NaN	2010	3079	5084
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5106	19.07	NaN	3534.4	30	0	1182.1	0.214				-1	 	0	46	438.25193224530244	874.4893115574049	2	438.25048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2022	3082	5105
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5107	19.074	NaN	3301.7	30	0	423.49	0.106	+			11862	FTDEEEVQID	10	63	612.7668624095941	1223.519171885988	2	612.7655029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FTDEEEVQID_	ENST00000395811.9_1_17:17091142-17091328:+|nuORF	70.8162118820467	0.27065172005956	5				NaN	NaN	0	NaN	2023	3082	5105
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5108	19.076	NaN	3201.4	30	0	431.68	0.106			+	20986	KKFNPTTIA	9	61	510.29709217451875	1018.5796314158375	2	510.2962951660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KKFNPTTIA_	REV__ENSG00000137804|ENST00000559596|NUSAP1;REV__ENST00000558123.5_1_15:41625112-41672381:+|nuORF;REV__nc|ENSG00000137804|Q9BXS6-2|NUSAP1;REV__nc|ENSG00000137804|Q9BXS6-3|NUSAP1;REV__nc|ENSG00000137804|Q9BXS6-4|NUSAP1;REV__nc|ENSG00000137804|Q9BXS6-5|NUSAP1;REV__nc|ENSG00000137804|Q9BXS6-6|NUSAP1;REV__nc|ENSG00000137804|Q9BXS6-7|NUSAP1	54.776311868738084	0.25715957988447635	5				NaN	NaN	0	NaN	2024	3082	5105
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5109	19.078	NaN	2014.6	30	0	589.71	0.106				-1	ALEEDEEMWF	10	47	657.7612648955626	1313.507976857925	2	657.7596435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_ALEEDEEM(Oxidation (M))WF_	ENSG00000275052|ENST00000616407|PPP4R3B;nc|ENSG00000275052|Q5MIZ7-2|PPP4R3B;nc|ENSG00000275052|Q5MIZ7-3|PPP4R3B;nc|ENSG00000275052|Q5MIZ7-5|PPP4R3B	27.882242232435846	0.6521336255503853	5				NaN	NaN	0	NaN	2025	3082	5105
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5110	19.079	NaN	2364.3	30	0	507.06	0.106	+			36347	SESSPPKAM	9	42	467.2215033075656	932.4284536819313	2	467.2206726074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SESSPPKAM_	ENSG00000050405|ENST00000341247|LIMA1;LIMA1|p.T536Lfs*38|2|0.4|ENSG00000050405|chr12:50177739-50177739|G/-|frameshift_variant;nc|ENSG00000050405|Q9UHB6-2|LIMA1;nc|ENSG00000050405|Q9UHB6-3|LIMA1;nc|ENSG00000050405|Q9UHB6-4|LIMA1;nc|ENSG00000050405|Q9UHB6-5|LIMA1	60.11826168202944	0.21262886028301267	5				NaN	NaN	0	NaN	2026	3082	5105
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5111	19.081	NaN	1496	30	0	206.93	0.106				-1	 	0	45	400.7357811323402	799.4570093314804	2	400.73492431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2027	3082	5105
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5112	19.083	NaN	1083.4	30	0	133.1	0.033	+			36448	SEVHSSPGV	9	34	449.71660438520087	NaN	0	449.7164306640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SEVHSSPGV_	ENSG00000182636|ENST00000649030|NDN	30.503639358989545	0.3235605894931338	5				NaN	NaN	0	NaN	2028	3082	5105
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5127	19.114	NaN	36062	30	0	9164.4	0.214	+			41558	SVQENIQQK	9	77	537.2840867868124	1072.5536206404247	2	537.2832641601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVQENIQQK_	ENSG00000138160|ENST00000260731|KIF11	185.71840793949184	0.0007219834064317508	5				NaN	NaN	0	NaN	2040	3085	5126
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5128	19.118	NaN	35509	30	0	15594	0.106				-1	 	0	98	343.5350213137589	1027.5832345414767	3	343.5343933105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2041	3085	5126
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5129	19.12	NaN	3296.5	30	0	615.05	0.106			+	-1	ISVCEKLKM	9	52	369.8682447324862	NaN	0	369.8682556152344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_ISVC(Carbamidomethyl (C))EKLKM_	REV__ENSG00000102524|ENST00000375887|TNFSF13B;REV__nc|ENSG00000102524|Q9Y275-2|TNFSF13B;REV__nc|ENSG00000102524|Q9Y275-3|TNFSF13B;REV__TNFSF13B|p.F194Lfs*18|1|0.19|ENSG00000102524|chr13:108303348-108303348|T/-|frameshift_variant	47.657333605630114	0.2228375344433429	5				NaN	NaN	0	NaN	2042	3085	5126
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5130	19.121	NaN	1410.2	30	0	396.83	0.106			+	7530	DGSIHGNVI	9	38	456.23354379531446	910.4525346574289	2	456.2323303222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DGSIHGNVI_	REV__ENSG00000183117|ENST00000635120|CSMD1;REV__nc|ENSG00000183117|Q96PZ7-2|CSMD1	31.954861631926434	0.5046124803899898	5				NaN	NaN	0	NaN	2043	3085	5126
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5131	19.123	NaN	1975.1	30	0	677.61	0.106			+	566	ADGPGPRCTA	10	50	501.22808120625973	1000.4416094793195	2	501.2269592285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_ADGPGPRC(Carbamidomethyl (C))TA_	REV__ENST00000459638.5_3_3:69591404-69591638:-|nuORF	40.77816245573522	0.5419747034533848	5				NaN	NaN	0	NaN	2044	3085	5126
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5132	19.125	NaN	1178.1	30	0	168.13	0.038	+			30720	QDIFGEDCVSV	11	45	606.2679443359375	NaN	0	606.2679443359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QDIFGEDCVSV_	ENSG00000119203|ENST00000238112|CPSF3	37.50817390946774	0.39825797133360086	5				NaN	NaN	0	NaN	2045	3085	5126
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5133	19.126	NaN	1472	30	0	203	0.141	+			10223	ETHENTSGL	9	57	494.22351754322665	986.4324821532533	2	494.22210693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ETHENTSGL_	ENSG00000121210|ENST00000409959|TMEM131L;nc|ENSG00000121210|A2VDJ0-2|TMEM131L;nc|ENSG00000121210|A2VDJ0-3|TMEM131L;nc|ENSG00000121210|A2VDJ0-6|TMEM131L;nc|ENSG00000121210|A2VDJ0|TMEM131L	44.116797842482775	0.37197099687881774	5				NaN	NaN	0	NaN	2046	3085	5126
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5147	19.157	NaN	46860	30	0	6616	0.214	+			43700	TKKMKKLEK	9	75	575.3543398698866	1148.6941268065732	2	575.3532104492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_TKKM(Oxidation (M))KKLEK_	ENSG00000164440|ENST00000358430|TXLNB;TXLNB|p.P545Lfs*2|1|0.31|ENSG00000164440|chr6:139242947-139242947|G/-|frameshift_variant	63.53385203322761	0.18415635464017938	5				NaN	NaN	0	NaN	2057	3088	5146
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5148	19.161	NaN	6202.4	30	0	1529.9	0.106				-1	 	0	66	518.7520784974512	1035.4896040617023	2	518.7512817382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2058	3088	5146
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5149	19.163	NaN	3755.1	30	0	765.61	0.106	+			20110	KEKKLTSDL	9	65	531.3138209958937	1060.6130890585873	2	531.3137817382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEKKLTSDL_	ENSG00000125844|ENST00000377813|RRBP1;nc|ENSG00000125844|Q9P2E9-3|RRBP1	76.16968421966216	0.11411088698345859	5				NaN	NaN	0	NaN	2059	3088	5146
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5150	19.165	NaN	5539.5	30	0	2396.1	0.106			+	47175	VLTPWPVPLK	10	40	383.9052283938031	1148.6938557816093	3	383.90435791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VLTPWPVPLK_	REV__CON__Q9U6Y5	16.71738777980365	0.7315012293134124	5				NaN	NaN	0	NaN	2060	3088	5146
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5151	19.166	NaN	2635	30	0	357.16	0.106	+			38287	SQQNATVLK	9	60	494.7761671516377	987.5377813700754	2	494.7745361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SQQNATVLK_	ENST00000427574.6_1_11:76156149-76164398:+|nuORF	96.0336014099291	0.047854655524928534	5				NaN	NaN	0	NaN	2061	3088	5146
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5152	19.168	NaN	3312.5	30	0	756.2	0.034				-1	GCVTENEN	8	57	461.6831837300223	921.3518145268446	2	461.6824645996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_GC(Carbamidomethyl (C))VTENEN_	DOCK10|p.F424Lfs*2|2|0.32|ENSG00000135905|chr2:224865073-224865073|A/-|frameshift_variant;ENSG00000135905|ENST00000258390|DOCK10;ENST00000492369.5_1_2:225727286-225907091:-|nuORF;nc|ENSG00000135905|Q96BY6-2|DOCK10;nc|ENSG00000135905|Q96BY6-3|DOCK10	35.61828744233558	0.6843154725607303	5				NaN	NaN	0	NaN	2062	3088	5146
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5153	19.169	NaN	2318.1	30	0	660.13	0.14	+			33120	RENTQTTI	8	53	481.74981109009246	961.485069246985	2	481.7481689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RENTQTTI_	ENSG00000165119|ENST00000376263|HNRNPK;ENST00000485383.1_1_3:96068520-96068997:+|nuORF;nc|ENSG00000165119|P61978-3|HNRNPK;nc|ENSG00000165119|P61978|HNRNPK	82.24051045832904	0.30490469762271794	5				NaN	NaN	0	NaN	2063	3088	5146
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5166	19.198	NaN	12955	30	0	1587.5	0.212			+	38195	SQFEPESLDET	11	77	641.2777896196027	1280.5410263060053	2	641.2764892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SQFEPESLDET_	REV__ENSG00000198198|ENST00000634258|SZT2;REV__nc|ENSG00000198198|Q5T011-5|SZT2;REV__SZT2|p.L1644Ffs*4|1|0.36|ENSG00000198198|chr1:43431727-43431728|-/T|frameshift_variant;REV__SZT2|p.P2844Rfs*9|1|0.34|ENSG00000198198|chr1:43443669-43443669|C/-|frameshift_variant;REV__SZT2|p.R3241Afs*11|1|0.33|ENSG00000198198|chr1:43448401-43448401|G/-|frameshift_variant	70.8162118820467	0.22893521292419713	5				NaN	NaN	0	NaN	2073	3091	5165
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5167	19.202	NaN	1862.8	30	0	408.97	0.106	+			13697	GPQGRAFVH	9	47	484.7576506709647	967.5007484087295	2	484.7563781738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GPQGRAFVH_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	68.484700416344	0.1473408039581241	5				NaN	NaN	0	NaN	2074	3091	5165
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5168	19.204	NaN	1897.1	30	0	552.02	0.106	+			4707	ATLTTTSATSK	11	53	541.2913332784818	1080.5681136237636	2	541.2908325195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATLTTTSATSK_	ENSG00000010244|ENST00000394670|ZNF207;ENST00000584696.1_1_17:30693734-30695045:+|nuORF;nc|ENSG00000010244|O43670-2|ZNF207;nc|ENSG00000010244|O43670-3|ZNF207;nc|ENSG00000010244|O43670|ZNF207	72.09557110113691	0.21826960075221502	5				NaN	NaN	0	NaN	2075	3091	5165
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5169	19.206	NaN	2231.2	30	0	325.9	0.106				-1	 	0	52	329.72214014842785	657.4297273636557	2	329.7213439941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2076	3091	5165
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5170	19.208	NaN	1800.6	30	0	336.22	0.106	+			48264	VTDGPGNYK	9	49	475.7334735746979	949.4523942161958	2	475.7321472167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTDGPGNYK_	ATRN|p.P984Lfs*34|1|0.23|ENSG00000088812|chr20:3584079-3584079|C/-|frameshift_variant;ENSG00000088812|ENST00000262919|ATRN;nc|ENSG00000088812|O75882-2|ATRN;nc|ENSG00000088812|O75882-3|ATRN	66.42927471994793	0.16001998865088202	5				NaN	NaN	0	NaN	2077	3091	5165
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5171	19.209	NaN	1556.4	30	0	217.12	0.106	+			49223	VVNDHDNDAN	10	39	556.735005151094	1111.455457368988	2	556.7342529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VVNDHDNDAN_	ENSG00000168813|ENST00000355898|ZNF507;nc|ENSG00000168813|Q8TCN5-2|ZNF507;ZNF507|p.H394Mfs*4|1|0.47|ENSG00000168813|chr19:32354001-32354001|A/-|frameshift_variant;ZNF507|p.L875Sfs*7|1|0.15|ENSG00000168813|chr19:32382841-32382842|-/T|frameshift_variant	36.446750945000026	0.5818864909973037	5				NaN	NaN	0	NaN	2078	3091	5165
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5172	19.211	NaN	771.85	30	0	71.282	0.033	+			36746	SHDVPGSPT	9	40	448.70916748046875	NaN	0	448.70916748046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SHDVPGSPT_	ENSG00000214944|ENST00000513042|ARHGEF28;ENST00000510312.6_1_5:73178320-73193923:+|nuORF;nc|ENSG00000214944|Q8N1W1-4|ARHGEF28;nc|ENSG00000214944|Q8N1W1-5|ARHGEF28;nc|ENSG00000214944|Q8N1W1-6|ARHGEF28	24.20275056022122	0.35506675290109213	5				NaN	NaN	0	NaN	2079	3091	5165
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5186	19.241	NaN	65143	30	0	27625	0.214				-1	 	0	98	465.2338769900384	928.4532010468769	2	465.2326965332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2090	3094	5185
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5187	19.244	NaN	12374	30	0	2568.2	0.106	+			41356	SVMAQVRQK	9	86	523.7933742510204	1045.5721955688407	2	523.7926025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVMAQVRQK_	ENSG00000038358|ENST00000358933|EDC4;ENST00000572067.1_1_16:67917790-67918048:+|nuORF;nc|ENSG00000038358|Q6P2E9-2|EDC4	134.7655990226056	0.012935733000282069	5				NaN	NaN	0	NaN	2091	3094	5185
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5188	19.246	NaN	8296.5	30	0	2516.3	0.106				-1	STRRRMRP	8	48	359.20192846590624	1074.5839559979188	3	359.201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_STRRRM(Oxidation (M))RP_	ENST00000378827.4_1_20:6748685-6748922:+|nuORF	30.503639358989545	0.7238069182250283	5				NaN	NaN	0	NaN	2092	3094	5185
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5189	19.248	NaN	5600	30	0	2327.7	0.106				-1	 	0	46	340.18595213701485	678.3573513408297	2	340.1852722167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2093	3094	5185
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5190	19.25	NaN	4497.3	30	0	1599.1	0.106				-1	EYSKQMQRF	9	55	616.7900594148349	NaN	0	616.7900390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_EYSKQM(Oxidation (M))QRF_	ENSG00000116478|ENST00000373548|HDAC1;ENSG00000196591|ENST00000519065|HDAC2;ENST00000463172.5_1_1:32757770-32792715:+|nuORF;ENST00000481281.5_1_1:32757770-32793222:+|nuORF;nc|ENSG00000196591|Q92769-3|HDAC2	39.252832667884924	0.27938773122138094	5				NaN	NaN	0	NaN	2094	3094	5185
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5191	19.252	NaN	3259.5	30	0	957.78	0.106	+			16698	HKNGETSL	8	51	443.22588430891875	884.4372156846375	2	443.2246398925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HKNGETSL_	ENSG00000129071|ENST00000429544|MBD4;MBD4|p.E314Kfs*4|1|0.74|ENSG00000129071|chr3:129436705-129436705|T/-|frameshift_variant;MBD4|p.K313Rfs*13|2|0.15|ENSG00000129071|chr3:129436705-129436706|TT/-|frameshift_variant;MBD4|p.P430Hfs*61|1|0.1|ENSG00000129071|chr3:129433972-129433972|G/-|frameshift_variant;nc|ENSG00000129071|O95243-3|MBD4;nc|ENSG00000129071|O95243-5|MBD4;nc|ENSG00000129071|O95243|MBD4	76.84663266511073	0.3498490246073164	5				NaN	NaN	0	NaN	2095	3094	5185
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5192	19.254	NaN	2096.1	30	0	387.69	0.035	+			33271	RGHAPPAAAPG	11	56	501.2678807544883	1000.5212085757767	2	501.2661437988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RGHAPPAAAPG_	ENSG00000152128|ENST00000281924|TMEM163	44.116797842482775	0.5016126852448448	5				NaN	NaN	0	NaN	2096	3094	5185
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5206	19.283	NaN	7470.8	30	0	1967.3	0.214	+			3006	ASFDKAKLK	9	39	336.5348018541873	1006.582576162762	3	336.5343017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASFDKAKLK_	ENSG00000034510|ENST00000233143|TMSB10	26.69291269510374	0.5537881896960711	5				NaN	NaN	0	NaN	2107	3097	5205
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5207	19.286	NaN	4485.1	30	0	1302.8	0.106				-1	 	0	57	504.29866172145347	1006.582770509707	2	504.29766845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2108	3097	5205
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5208	19.288	NaN	3392.1	30	0	1064.5	0.106	+			42517	TAPQAEHAM	9	51	478.21985558137123	954.4251582295425	2	479.24481201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TAPQAEHAM_	CLUH|p.D1252Tfs*5|1|0.42|ENSG00000132361|chr17:2690771-2690771|T/-|frameshift_variant;CLUH|p.K974Rfs*21|1|0.3|ENSG00000132361|chr17:2694178-2694178|G/-|frameshift_variant;CLUH|p.P878Rfs*12|1|0.23|ENSG00000132361|chr17:2694959-2694959|G/-|frameshift_variant;ENSG00000132361|ENST00000651024|CLUH;nc|ENSG00000132361|O75153|CLUH	37.15910966729921	0.4535818937225704	5				NaN	NaN	0	NaN	2109	3097	5205
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5209	19.29	NaN	2665.7	30	0	1436.5	0.106			+	12259	GAVATVAPSNH	11	51	512.2657206920953	1022.5168884509907	2	512.2649536132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GAVATVAPSNH_	REV__ENSG00000139718|ENST00000604567|SETD1B;REV__nc|ENSG00000139718|Q9UPS6-2|SETD1B;REV__SETD1B|p.A1222Hfs*53|1|0.21|ENSG00000139718|chr12:121819645-121819645|G/-|frameshift_variant;REV__SETD1B|p.L1532Ffs*35|1|0.12|ENSG00000139718|chr12:121823172-121823173|-/T|frameshift_variant;REV__SETD1B|p.Q1589Sfs*11|3|0.38|ENSG00000139718|chr12:121823338-121823338|C/-|frameshift_variant;REV__SETD1B|p.S561Rfs*47|1|0.46|ENSG00000139718|chr12:121810620-121810620|C/-|frameshift_variant	41.42661286455405	0.5384226294179143	5				NaN	NaN	0	NaN	2110	3097	5205
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5210	19.292	NaN	1804	30	0	181.29	0.106	+			21799	KQWKLQQI	8	58	536.3178026635463	NaN	0	536.7855834960938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KQWKLQQI_	ENSG00000067836|ENST00000322048|ROGDI	55.50420428727701	1.7418937515398478	5				NaN	NaN	0	NaN	2111	3097	5205
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5211	19.294	NaN	976.77	30	0	138.95	0.035			+	-1	CPFCRPCI	8	39	498.2164611816406	NaN	0	498.2164611816406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_CPFC(Carbamidomethyl (C))RPCI_	REV__ENST00000296220.5_1_3:125313783-125313900:-|nuORF	28.2542754592877	1.7418937515398478	5				NaN	NaN	0	NaN	2112	3097	5205
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5212	19.294	NaN	3519.9	30	0	363.86	0.14			+	4348	ATGQDLDNAL	10	57	509.2475873914247	1016.4806218496494	2	509.24658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATGQDLDNAL_	REV__ENSG00000214694|ENST00000409978|ARHGEF33	47.95952297671804	0.47580206326914537	5				NaN	NaN	0	NaN	2113	3097	5205
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5225	19.324	NaN	10521	30	0	1130.2	0.214				-1	 	0	59	440.7547294357351	879.4949059382702	2	440.75335693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2123	3100	5224
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5226	19.328	NaN	4354.4	30	0	579.8	0.106			+	17740	IEQEHLYKL	9	64	586.8184766515217	1171.6224003698433	2	586.8174438476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IEQEHLYKL_	REV__ENSG00000145632|ENST00000274289|PLK2;REV__ENST00000515415.5_1_5:57754112-57754961:-|nuORF	128.60217544463768	0.015992218256422188	5				NaN	NaN	0	NaN	2124	3100	5224
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5227	19.33	NaN	5287	30	0	600.68	0.106			+	22145	KSQRSATKGRV	11	74	609.3565767491356	1216.698600565071	2	609.3557739257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KSQRSATKGRV_	REV__AVPR1A|p.F351Lfs*19|4|0.28|ENSG00000166148|chr12:63147563-63147563|A/-|frameshift_variant;REV__ENSG00000166148|ENST00000299178|AVPR1A	59.26467630326872	0.33001889715770233	5				NaN	NaN	0	NaN	2125	3100	5224
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5228	19.331	NaN	6778.6	30	0	874.42	0.106				-1	TWYRHYRCCRQ	11	86	835.8740975989875	1669.733642264775	2	835.8723754882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))TWYRHYRCC(Carbamidomethyl (C))RQ_	ENST00000448464.6_1_8:95941986-95942052:-|nuORF	5.220141733780809	0.8460459167827878	5				NaN	NaN	0	NaN	2126	3100	5224
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5229	19.333	NaN	2799	30	0	1492.2	0.106			+	-1	GDRSFICT	8	48	478.21985558137123	954.4251582295425	2	478.218505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_GDRSFIC(Carbamidomethyl (C))T_	REV__ENST00000372876.1_1_6:42712424-42712766:-|nuORF	31.954861631926434	0.7126016770032289	5				NaN	NaN	0	NaN	2127	3100	5224
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5230	19.335	NaN	1111	30	0	143.12	0.106	+			35534	SAVKEGTAM	9	50	447.2243376318077	892.4341223304154	2	447.22308349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SAVKEGTAM_	BICC1|p.I566Nfs*44|1|0.3|ENSG00000122870|chr10:58799216-58799217|-/A|frameshift_variant;BICC1|p.I566Sfs*5|1|0.57|ENSG00000122870|chr10:58799217-58799217|A/-|frameshift_variant;BICC1|p.P501Hfs*18|1|0.03|ENSG00000122870|chr10:58798530-58798530|C/-|frameshift_variant;ENSG00000122870|ENST00000373886|BICC1;nc|ENSG00000122870|Q9H694-2|BICC1	47.657333605630114	0.33044192980041115	5				NaN	NaN	0	NaN	2128	3100	5224
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5231	19.337	NaN	3378.8	30	0	394.8	0.031				-1	 	0	58	362.7094585089898	723.4043640847797	2	362.708740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2129	3100	5224
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5243	19.362	NaN	8932.9	30	0	3127.9	0.214	+			34583	RVMKALVNR	9	77	543.8334647095239	1085.6523764858478	2	543.8321533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVMKALVNR_	ENSG00000149136|ENST00000278412|SSRP1;ENST00000293880.9_1_11:57098199-57100416:-|nuORF	120.8684288430529	0.02067403653475984	5				NaN	NaN	0	NaN	2138	3103	5242
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5244	19.366	NaN	7008.2	30	0	1742.8	0.106			+	22538	KTRIDPPLN	9	68	527.3041127470906	1052.593672560981	2	527.3009643554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTRIDPPLN_	REV__ENSG00000136450|ENST00000258962|SRSF1;REV__ENST00000578430.1_1_17:56083680-56084618:-|nuORF;REV__nc|ENSG00000136450|Q07955-2|SRSF1;REV__nc|ENSG00000136450|Q07955-3|SRSF1	66.42927471994793	0.16001998865088202	5				NaN	NaN	0	NaN	2139	3103	5242
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5245	19.368	NaN	9104.6	30	0	2730.8	0.106			+	-1	ATHTASGPMLP	11	47	366.846231280573	1097.516864441919	3	367.17974853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_ATHTASGPM(Oxidation (M))LP_	REV__ENSG00000154447|ENST00000284637|SH3RF1	24.231819034082204	0.7356191775841856	5				NaN	NaN	0	NaN	2140	3103	5242
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5246	19.37	NaN	4643.6	30	0	917.7	0.106	+			31450	QKSLDSLKK	9	72	523.8150614698592	1045.6155700065183	2	523.8141479492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QKSLDSLKK_	tr|U7STP1|U7STP1_FUSNUP-typeCa(2+)transporterOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01417PE=4SV=1	101.60071028292904	0.0375685401170269	5				NaN	NaN	0	NaN	2141	3103	5242
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5247	19.371	NaN	1911.5	30	0	189.53	0.106	+			46486	VETLKFAKGQ	10	64	560.8201904296875	NaN	0	560.8201904296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VETLKFAKGQ_	ENSG00000099998|ENST00000327365|GGT5;nc|ENSG00000099998|P36269-2|GGT5;nc|ENSG00000099998|P36269-3|GGT5	37.81151784470057	0.3760215235790741	5				NaN	NaN	0	NaN	2142	3103	5242
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5248	19.373	NaN	3616.9	30	0	289.45	0.035	+			36818	SIEKGGSLPK	10	65	508.29449215542206	1014.5744313776441	2	508.2928771972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SIEKGGSLPK_	ENSG00000181163|ENST00000296930|NPM1;nc|ENSG00000181163|P06748-2|NPM1	81.52500206392136	0.18316182710238588	5				NaN	NaN	0	NaN	2143	3103	5242
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5249	19.374	NaN	2110.7	30	0	396.33	0.139			+	26234	LSSPFNYS	8	52	457.71544000507885	913.4163270769577	2	457.7139587402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSSPFNYS_	REV__ENST00000539542.5_2_5:118487642-118500286:+|nuORF	45.9519527083369	0.6193794311207887	5				NaN	NaN	0	NaN	2144	3103	5242
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5267	19.413	NaN	8299.4	30	0	1031.5	0.214			+	13338	GKQWDQGVM	9	64	524.7470722468717	1047.4795915605432	2	524.7467651367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GKQWDQGVM_	REV__tr|U7SRH0|U7SRH0_FUSNUDUF2207domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01599PE=4SV=1	64.20726635412375	0.17854274437659667	5				NaN	NaN	0	NaN	2159	3106	5266
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5268	19.417	NaN	3670.2	30	0	360.27	0.106			+	26745	LVMRRRGL	8	62	500.8124832135179	999.6104134938358	2	500.8115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LVMRRRGL_	REV__ENST00000393633.6_1_7:75045698-75045761:+|nuORF	35.200714571348534	0.6875396545722289	5				NaN	NaN	0	NaN	2160	3106	5266
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5269	19.419	NaN	1708.3	30	0	409.88	0.106			+	44022	TPLHSLCGRA	10	56	527.775165111257	NaN	0	527.8067016601562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TPLHSLCGRA_	REV__ENST00000507917.5_1_4:44704555-44704834:-|nuORF	47.657333605630114	0.3204131577145918	5				NaN	NaN	0	NaN	2161	3106	5266
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5270	19.42	NaN	3218.8	30	0	374.39	0.106	+			16492	HETSKMKVL	9	53	358.1996373239122	1071.5770825719367	3	358.1991271972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HETSKMKVL_	ENSG00000067445|ENST00000173898|TRO;ENSG00000179222|ENST00000326587|MAGED1;ENST00000475183.1_1_X:54953428-54957230:+|nuORF;ENST00000492706.5_1_X:54953428-54957450:+|nuORF;ENST00000494718.5_1_X:51643260-51645023:+|nuORF;nc|ENSG00000067445|Q12816-2|TRO;nc|ENSG00000067445|Q12816-3|TRO;nc|ENSG00000067445|Q12816-4|TRO;nc|ENSG00000067445|Q12816-5|TRO;nc|ENSG00000179222|Q9Y5V3-2|MAGED1;TRO|p.S1034Rfs*10|1|0.07|ENSG00000067445|chrX:54929826-54929826|C/-|frameshift_variant	37.15910966729921	0.4535818937225704	5				NaN	NaN	0	NaN	2162	3106	5266
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5271	19.422	NaN	1568.1	30	0	156.51	0.106			+	24487	LGGTLRSLE	9	54	473.2716890547532	NaN	0	472.79815673828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LGGTLRSLE_	REV__ENSG00000137975|ENST00000370565|CLCA2	60.97194046774394	0.14517358171632622	5				NaN	NaN	0	NaN	2163	3106	5266
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5272	19.424	NaN	1291.7	30	0	76.693	0.035			+	-1	KCKSLIIQ	8	62	495.2936706542969	NaN	0	495.2936706542969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_KC(Carbamidomethyl (C))KSLIIQ_	REV__ARAP2|p.M71Cfs*34|1|0.38|ENSG00000047365|chr4:36229276-36229276|T/-|frameshift_variant	60.11826168202944	1.7418937515398478	5				NaN	NaN	0	NaN	2164	3106	5266
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5273	19.425	NaN	891.37	30	0	91.247	0.141				-1	IMGDKLWW	8	39	532.7645874023438	NaN	0	532.7645874023438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_IM(Oxidation (M))GDKLWW_	ENSG00000123384|ENST00000243077|LRP1;LRP1|p.R3469Gfs*24|2|0.38|ENSG00000123384|chr12:57201552-57201552|C/-|frameshift_variant	33.51558372728122	1.7418937515398478	5				NaN	NaN	0	NaN	2165	3106	5266
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5287	19.456	NaN	3988.1	30	0	613.79	0.214	+			5450	ATYSVGMQK	9	61	500.74266176120614	999.4707705892123	2	500.7420654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ATYSVGM(Oxidation (M))QK_	ENSG00000131941|ENST00000254260|RHPN2;ENST00000592247.1_1_19:33470904-33481620:-|nuORF;nc|ENSG00000131941|Q8IUC4-2|RHPN2;nc|ENSG00000258628|A8MT19|RHPN2P1	104.0567914643314	0.03506238181059741	5				NaN	NaN	0	NaN	2176	3109	5286
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5288	19.46	NaN	2612.2	30	0	414.23	0.106				-1	 	0	51	503.78871571678025	1005.5628785003605	2	503.78717041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2177	3109	5286
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5289	19.462	NaN	1823.7	30	0	256.14	0.106	+			21109	KKRDRDRV	8	52	536.8218994140625	NaN	0	536.8218994140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KKRDRDRV_	BRD7|p.H472Afs*14|1|0.32|ENSG00000166164|chr16:50323616-50323617|-/C|frameshift_variant;ENSG00000166164|ENST00000394688|BRD7;ENST00000466133.1_1_3:159818637-159819075:+|nuORF;nc|ENSG00000166164|Q9NPI1-2|BRD7	36.446750945000026	1.7418937515398478	5				NaN	NaN	0	NaN	2178	3109	5286
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5290	19.463	NaN	846.68	30	0	189.43	0.106				-1	ITAHCSLNLP	10	41	563.287353515625	NaN	0	563.287353515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_ITAHC(Carbamidomethyl (C))SLNLP_	ENST00000447070.1_1_2:27581093-27581231:+|nuORF	22.579656572578934	0.4201028297492154	5				NaN	NaN	0	NaN	2179	3109	5286
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5291	19.465	NaN	2110	30	0	355.46	0.106	+			45376	TVTGAAVHAF	10	47	487.2582869475537	972.5020209619074	2	487.25677490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TVTGAAVHAF_	ENST00000378169.7_1_1:5965468-6021937:-|nuORF;ENST00000478423.6_1_1:5965468-6029316:-|nuORF	65.80317337860623	0.313061058278602	5				NaN	NaN	0	NaN	2180	3109	5286
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5292	19.467	NaN	1826.1	30	0	196.75	0.106			+	2070	ALAPWIPVG	9	46	462.26999354073837	922.5254341482768	2	462.2682189941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ALAPWIPVG_	REV__ENST00000321582.9_1_9:124801621-124854975:-|nuORF	49.21078951299608	0.3122205139198386	5				NaN	NaN	0	NaN	2181	3109	5286
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5293	19.469	NaN	682.18	30	0	179.99	0.042			+	-1	FDQFRDLPCRC	11	19	757.333984375	NaN	0	757.333984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C)	_FDQFRDLPC(Carbamidomethyl (C))RC(Carbamidomethyl (C))_	REV__ENSG00000162399|ENST00000651561|BSND	7.804521658770766	0.456735970842152	5				NaN	NaN	0	NaN	2182	3109	5286
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5307	19.499	NaN	7304.1	30	0	1701.4	0.214			+	44540	TSYVAPNGEL	10	70	525.7600296566321	1049.5055063800642	2	525.7598876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSYVAPNGEL_	REV__ENSG00000163395|ENST00000335211|IGFN1;REV__nc|ENSG00000163395|Q86VF2-2|IGFN1;REV__nc|ENSG00000163395|Q86VF2|IGFN1	69.6276240434122	0.2803623802747859	5				NaN	NaN	0	NaN	2193	3112	5306
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5308	19.502	NaN	4695.3	30	0	633.64	0.106	+			11453	FNDPNAKEM	9	70	541.2364523037166	1080.4583516742332	2	541.2361450195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_FNDPNAKEM(Oxidation (M))_	ENSG00000056097|ENST00000265069|ZFR	143.37361013837676	0.008897369944672323	5				NaN	NaN	0	NaN	2194	3112	5306
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5309	19.504	NaN	6867.2	30	0	1897.9	0.106				-1	 	0	56	452.7323652057607	903.4501774783214	2	452.7318115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2195	3112	5306
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5310	19.506	NaN	2668.3	30	0	524.06	0.106				-1	 	0	52	518.7520784974512	1035.4896040617023	2	518.7526245117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2196	3112	5306
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5311	19.508	NaN	7940.7	30	0	1845.7	0.106			+	12175	GALVGKEK	8	57	401.24588720628014	800.4772214793603	2	401.2452697753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GALVGKEK_	REV__tr|U7T5K0|U7T5K0_FUSNUelongationfactorGOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00176PE=3SV=1	102.7733458925114	0.2491487235419157	5				NaN	NaN	0	NaN	2197	3112	5306
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5312	19.51	NaN	1545.2	30	0	193.05	0.033	+			4698	ATLTGGPAR	9	42	422.238791648792	842.463030364384	2	422.238037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATLTGGPAR_	ENSG00000055609|ENST00000262189|KMT2C;ENSG00000167548|ENST00000301067|KMT2D;KMT2C|p.I4868Lfs*37|1|0.28|ENSG00000055609|chr7:152138837-152138837|T/-|frameshift_variant;nc|ENSG00000055609|Q8NEZ4-2|KMT2C;nc|ENSG00000055609|Q8NEZ4-3|KMT2C;nc|ENSG00000167548|O14686-3|KMT2D	26.69291269510374	0.5537881896960711	5				NaN	NaN	0	NaN	2198	3112	5306
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5313	19.51	NaN	871.67	30	0	206.25	0.142			+	20507	KFFKRFYM	8	42	583.8112182617188	NaN	0	583.8112182617188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KFFKRFYM_	REV__ENSG00000113597|ENST00000399438|TRAPPC13;REV__ENST00000508304.5_1_5:64920917-64948411:+|nuORF;REV__ENST00000512009.5_1_5:64920875-64956772:+|nuORF;REV__nc|ENSG00000113597|A5PLN9-2|TRAPPC13;REV__nc|ENSG00000113597|A5PLN9-4|TRAPPC13;REV__nc|ENSG00000113597|A5PLN9-5|TRAPPC13;REV__nc|ENSG00000113597|A5PLN9-7|TRAPPC13	23.04248740728303	1.7418937515398478	5				NaN	NaN	0	NaN	2199	3112	5306
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5327	19.542	NaN	9080.4	30	0	1214.6	0.214	+			42062	SYAKSTQRF	9	72	544.2812755502717	1086.5479981673434	2	544.280517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SYAKSTQRF_	ENST00000430580.6_1_1:16939836-16939869:-|nuORF	90.14881205920913	0.06444578693273594	5				NaN	NaN	0	NaN	2210	3115	5326
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5328	19.545	NaN	10447	30	0	3724	0.106			+	-1	LHTLVSDRM	9	51	363.1899561047144	1086.5480389143431	3	363.18914794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LHTLVSDRM(Oxidation (M))_	REV__ENSG00000160179|ENST00000398449|ABCG1;REV__ENST00000472587.5_1_21:43696971-43716499:+|nuORF;REV__ENST00000496783.1_1_21:43708308-43714771:+|nuORF;REV__nc|ENSG00000160179|P45844-2|ABCG1;REV__nc|ENSG00000160179|P45844-3|ABCG1;REV__nc|ENSG00000160179|P45844-5|ABCG1;REV__nc|ENSG00000160179|P45844-6|ABCG1;REV__nc|ENSG00000160179|P45844-7|ABCG1;REV__nc|ENSG00000160179|P45844-8|ABCG1;REV__nc|ENSG00000160179|P45844|ABCG1	27.882242232435846	0.5426732730940306	5				NaN	NaN	0	NaN	2211	3115	5326
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5329	19.547	NaN	6072	30	0	554.61	0.106			+	8571	EAWYRGSH	8	63	503.2302837958807	1004.4460146585615	2	503.2291259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EAWYRGSH_	REV__ENSG00000147955|ENST00000277010|SIGMAR1;REV__nc|ENSG00000147955|Q99720-2|SIGMAR1;REV__nc|ENSG00000147955|Q99720-5|SIGMAR1	31.954861631926434	0.7126016770032289	5				NaN	NaN	0	NaN	2212	3115	5326
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5330	19.549	NaN	5111.9	30	0	3206.5	0.106				-1	 	0	35	324.53489122974133	970.582844289424	3	324.5342712402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2213	3115	5326
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5331	19.551	NaN	4635.4	30	0	785.61	0.106				-1	 	0	63	530.2942618460875	1058.5739707589748	2	530.293701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2214	3115	5326
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5332	19.553	NaN	2036.6	30	0	215.03	0.036	+			30913	QELDLRIGCA	10	57	559.2862548828125	NaN	0	559.2862548828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QELDLRIGCA_	ENSG00000100038|ENST00000357179|TOP3B;ENST00000444502.5_1_22:22313806-22324763:-|nuORF;ENST00000457179.5_1_22:22317029-22324763:-|nuORF;nc|ENSG00000100038|O95985-2|TOP3B;nc|ENSG00000100038|O95985-3|TOP3B	47.227680397652996	0.32312948777114064	5				NaN	NaN	0	NaN	2215	3115	5326
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5333	19.553	NaN	5316.2	30	0	1272.6	0.141			+	-1	QGDSCAGEPR	10	61	538.7244745047277	1075.4343960762553	2	538.7234497070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_QGDSC(Carbamidomethyl (C))AGEPR_	REV__TACC2|p.G954S|1|0.35|ENSG00000138162|chr10:122085360-122085360|G/A|missense_variant	35.15202426646627	0.5927656479315102	5				NaN	NaN	0	NaN	2216	3115	5326
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5345	19.581	NaN	15605	30	0	2761.3	0.214	+			38859	SSNSMQTIQK	10	68	562.2748324590757	1122.5351119849513	2	562.2744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSNSMQTIQK_	ENSG00000111057|ENST00000388835|KRT18;ENST00000446618.1_1_22:19245879-19246326:+|nuORF;ENST00000447938.1_1_21:21797263-21797497:-|nuORF;ENST00000506277.1_1_5:36886275-36886596:+|nuORF	218.9424138723421	3.857079081853412E-10	5				NaN	NaN	0	NaN	2225	3118	5344
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5346	19.584	NaN	5946.5	30	0	729.91	0.106				-1	 	0	62	465.29338296373584	928.5722129942717	2	465.2923278808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2226	3118	5344
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5347	19.586	NaN	3136.3	30	0	489.31	0.106			+	43291	TFLLPFLSY	9	58	550.8044286374915	1099.5943043417828	2	550.8037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TFLLPFLSY_	REV__ENSG00000159063|ENST00000299626|ALG8;REV__nc|ENSG00000159063|Q9BVK2-2|ALG8	23.52269567125451	0.5834155526130771	5				NaN	NaN	0	NaN	2227	3118	5344
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5348	19.588	NaN	1756.7	30	0	298.18	0.106	+			14733	GTIVTAQTK	9	57	459.7675294102572	917.5205058873145	2	459.7663269042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTIVTAQTK_	ENSG00000124151|ENST00000371998|NCOA3;nc|ENSG00000124151|Q9Y6Q9-2|NCOA3;nc|ENSG00000124151|Q9Y6Q9-3|NCOA3;nc|ENSG00000124151|Q9Y6Q9-4|NCOA3;nc|ENSG00000124151|Q9Y6Q9-5|NCOA3;NCOA3|p.P467Hfs*15|1|0.2|ENSG00000124151|chr20:47635604-47635604|C/-|frameshift_variant	89.02883481214508	0.06760336634167786	5				NaN	NaN	0	NaN	2228	3118	5344
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5349	19.59	NaN	2932.3	30	0	1157.5	0.106			+	8968	EFLAFIFLT	9	37	367.53808496537226	NaN	0	367.5379943847656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EFLAFIFLT_	REV__ENSG00000164073|ENST00000641686|MFSD8;REV__ENST00000505284.5_1_4:128842916-128886288:-|nuORF;REV__ENST00000515130.5_1_4:128842916-128886236:-|nuORF	20.94693142431847	0.3660861156085067	5				NaN	NaN	0	NaN	2229	3118	5344
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5350	19.591	NaN	1369.9	30	0	390.41	0.038			+	12022	FWWSFQKAM	9	47	615.7903781134534	1229.5662032937066	2	615.7890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FWWSFQKAM_	REV__ENST00000357103.4_1_12:1895563-1895707:+|nuORF	29.14955571784316	0.5308295550522326	5				NaN	NaN	0	NaN	2230	3118	5344
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5351	19.592	NaN	1488.4	30	0	168.84	0.142	+			30789	QEAHRTYFS	9	55	569.766015710208	1137.5174784872158	2	569.7645874023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QEAHRTYFS_	COL6A6|p.Y493Lfs*29|1|0.06|ENSG00000206384|chr3:130566894-130566895|-/GTTGC|frameshift_variant;ENSG00000172752|ENST00000373157|COL6A5;ENSG00000206384|ENST00000358511|COL6A6;nc|ENSG00000172752|A8TX70-2|COL6A5;nc|ENSG00000172752|A8TX70|COL6A5;nc|ENSG00000206384|A6NMZ7-2|COL6A6	52.936696900407355	0.27249468807391813	5				NaN	NaN	0	NaN	2231	3118	5344
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5365	19.624	NaN	4182.1	30	0	451.32	0.214				-1	 	0	60	508.3359433409592	1014.6573337487184	2	508.3349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2242	3121	5364
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5366	19.627	NaN	5025	30	0	966.05	0.106	+			19332	KAISKEGFK	9	33	336.5348018541873	1006.582576162762	3	336.53424072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KAISKEGFK_	tr|U7T2A4|U7T2A4_FUSNUHolo-[acyl-carrier-protein]synthaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=acpSPE=3SV=1	21.9598887501803	0.5980208138527809	5				NaN	NaN	0	NaN	2243	3121	5364
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5367	19.629	NaN	7019.7	30	0	3383.5	0.106				-1	 	0	51	339.2263081422943	1014.6570950270828	3	339.2255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2244	3121	5364
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5368	19.631	NaN	2056.1	30	0	247.56	0.106			+	19238	KAAQSERLY	9	60	533.2888524340294	1064.5631519348588	2	533.287841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KAAQSERLY_	REV__ENSG00000129515|ENST00000362031|SNX6;REV__ENST00000555541.1_1_14:35044943-35055441:-|nuORF;REV__ENST00000556162.5_1_14:35032330-35073396:-|nuORF;REV__nc|ENSG00000129515|Q9UNH7-2|SNX6;REV__SNX6|p.N346Ifs*30|1|0.21|ENSG00000129515|chr14:34567934-34567934|T/-|frameshift_variant	80.45461616416974	0.09558281504443908	5				NaN	NaN	0	NaN	2245	3121	5364
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5369	19.633	NaN	2185.4	30	0	295.54	0.106				-1	FLVDLLCC	8	62	520.2499039428825	NaN	0	520.2499389648438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C)	_FLVDLLC(Carbamidomethyl (C))C(Carbamidomethyl (C))_	ENSG00000148358|ENST00000347136|GPR107;ENST00000493417.5_1_9:132839594-132891041:+|nuORF;nc|ENSG00000148358|Q5VW38|GPR107	57.452649787351945	1.7418937515398478	5				NaN	NaN	0	NaN	2246	3121	5364
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5370	19.635	NaN	934.59	30	0	118.49	0.037	+			21744	KQMKLEAAGGP	11	42	565.30419921875	NaN	0	565.30419921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KQMKLEAAGGP_	ENSG00000170854|ENST00000394198|RIOX2;nc|ENSG00000170854|Q8IUF8-2|RIOX2;nc|ENSG00000170854|Q8IUF8-4|RIOX2	49.46582953369473	0.3191553428975593	5				NaN	NaN	0	NaN	2247	3121	5364
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5371	19.635	NaN	5967.9	30	0	2615.3	0.141				-1	 	0	51	451.73025984675996	901.44596676032	2	451.7290954589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2248	3121	5364
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5385	19.666	NaN	3492.7	30	0	734.07	0.214				-1	 	0	55	478.27442809709834	954.5343032609967	2	478.2730407714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2259	3124	5384
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5386	19.67	NaN	6227.8	30	0	2628.3	0.106	+			2533	AQAELQHVLG	10	41	355.86177433692615	1064.5634936109784	3	355.8612060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AQAELQHVLG_	ENSG00000135587|ENST00000258052|SMPD2	58.22992032128504	0.38193887838457763	5				NaN	NaN	0	NaN	2260	3124	5384
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5387	19.672	NaN	3230.5	30	0	634.11	0.106				-1	CQRCKIWCRC	10	64	706.8127234941492	1411.6108940550982	2	706.8109130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_CQRCKIWC(Carbamidomethyl (C))RC(Carbamidomethyl (C))_	ENST00000440114.1_1_2:198362106-198364543:-|nuORF	34.172542307311794	0.6007644933930345	5				NaN	NaN	0	NaN	2261	3124	5384
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5388	19.673	NaN	6609.2	30	0	1416.1	0.106	+			22838	KVHVEPKKRP	10	81	609.3780383841271	1216.741523835054	2	609.377197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KVHVEPKKRP_	L1PA6_dup546|chr2:49227587-49231532:-|4.547726375381561|0.2927699401366612|3.96|483.0|20|1|sense	62.107414245175825	0.3466735403679669	5				NaN	NaN	0	NaN	2262	3124	5384
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5389	19.675	NaN	2129.5	30	0	274.1	0.106	+			41184	SVLAQQAAK	9	59	458.2661553396278	NaN	0	458.266357421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVLAQQAAK_	ENSG00000134248|ENST00000602318|LAMTOR5;ENST00000531779.1_1_1:110946539-110950281:-|nuORF	67.49366992349736	0.1173583512313808	5				NaN	NaN	0	NaN	2263	3124	5384
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5390	19.677	NaN	2655.9	30	0	766.14	0.036	+			16813	HPDKKIVAY	9	56	535.8045344103253	1069.5945158874506	2	535.8040771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HPDKKIVAY_	ATXN10|p.F455Lfs*10|1|0.3|ENSG00000130638|chr22:45843115-45843115|T/-|frameshift_variant;ENSG00000130638|ENST00000252934|ATXN10;nc|ENSG00000130638|Q9UBB4-2|ATXN10	58.22992032128504	0.22837015374068087	5				NaN	NaN	0	NaN	2264	3124	5384
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5391	19.678	NaN	2454.9	30	0	591.29	0.139	+			10774	FAGNQAKR	8	41	446.24362336544806	890.4726937976961	2	446.2422790527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FAGNQAKR_	ENSG00000163888|ENST00000296238|CAMK2N2	26.79610172149135	0.7524337208463756	5				NaN	NaN	0	NaN	2265	3124	5384
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5406	19.71	NaN	2473.4	30	0	341.27	0.214	+			10256	ETLGLRQR	8	67	486.7822248425478	971.5498967518956	2	486.7808837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ETLGLRQR_	ENSG00000058453|ENST00000375541|CROCC;nc|ENSG00000058453|Q5TZA2-2|CROCC	73.97473282117947	0.3737790450121076	5				NaN	NaN	0	NaN	2277	3127	5405
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5407	19.714	NaN	1423.6	30	0	305.55	0.106	+			40986	SVGLPSRTK	9	46	472.78055798237057	943.5465630315412	2	472.7795715332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVGLPSRTK_	ENSG00000065526|ENST00000375759|SPEN	40.77816245573522	0.41113185337114944	5				NaN	NaN	0	NaN	2278	3127	5405
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5408	19.716	NaN	1234.7	30	0	227.04	0.106			+	29727	PHNRISPL	8	45	467.2662048339844	NaN	0	467.2662048339844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PHNRISPL_	REV__ENSG00000226690|ENST00000636804|unknown;REV__nc|nan|A0A1B0GVB3-2|C7orf78	35.200714571348534	1.7418937515398478	5				NaN	NaN	0	NaN	2279	3127	5405
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5409	19.718	NaN	2284.4	30	0	337.23	0.106	+			40359	STTRLYLRK	9	49	379.8966961361249	1136.6682590085748	3	379.8962097167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STTRLYLRK_	ENSG00000051180|ENST00000267868|RAD51;nc|ENSG00000051180|Q06609-2|RAD51;nc|ENSG00000051180|Q06609-4|RAD51	47.657333605630114	0.33044192980041115	5				NaN	NaN	0	NaN	2280	3127	5405
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5410	19.72	NaN	1437.6	30	0	182.69	0.106			+	31326	QIQELQLR	8	45	514.2990128133907	1026.5834726935814	2	514.2979125976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QIQELQLR_	REV__BSN|p.P3390Hfs*97|1|0.22|ENSG00000164061|chr3:49662009-49662009|C/-|frameshift_variant;REV__BSN|p.P3790Hfs*5|1|0.5|ENSG00000164061|chr3:49663523-49663523|C/-|frameshift_variant;REV__ENSG00000164061|ENST00000296452|BSN	44.116797842482775	0.6307669463330267	5				NaN	NaN	0	NaN	2281	3127	5405
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5411	19.721	NaN	928.35	30	0	120.5	0.036			+	-1	CIAGTMTVPF	10	43	528.2496622966306	1054.4847716600611	2	528.2495727539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_CIAGTM(Oxidation (M))TVPF_	REV__ENSG00000163637|ENST00000638394|PRICKLE2;REV__PRICKLE2|p.D763Tfs*29|1|0.34|ENSG00000163637|chr3:64099299-64099299|C/-|frameshift_variant;REV__PRICKLE2|p.G512Afs*16|1|0.13|ENSG00000163637|chr3:64146955-64146955|C/-|frameshift_variant;REV__PRICKLE2|p.G542Afs*40|1|0.07|ENSG00000163637|chr3:64146865-64146865|C/-|frameshift_variant	23.04248740728303	0.69165701907106	5				NaN	NaN	0	NaN	2282	3127	5405
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5424	19.749	NaN	6462.9	30	0	605.1	0.214	+			22977	KVRKGDFR	8	71	503.3015867548938	1004.5886205765876	2	503.300537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVRKGDFR_	ENST00000301244.11_1_19:38755282-38755522:+|nuORF	44.377184641726394	0.6291511924298419	5				NaN	NaN	0	NaN	2292	3130	5423
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5425	19.752	NaN	2137.9	30	0	414.66	0.106	+			19121	IYLMSYISN	9	55	552.2766351795126	1102.538717425825	2	552.2758178710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IYLMSYISN_	ABCA8|p.L1128*|1|0.37|ENSG00000141338|chr17:68885242-68885242|A/-|frameshift_variant;ENSG00000141338|ENST00000586539|ABCA8;ENST00000541225.5_1_17:66883094-66937097:-|nuORF;nc|ENSG00000141338|O94911-1|ABCA8	71.29570347882199	0.13518600952103718	5				NaN	NaN	0	NaN	2293	3130	5423
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5426	19.754	NaN	2909	30	0	264.7	0.106	+			5370	ATYAGVGANK	10	59	476.2483892204616	950.4822255077232	2	476.7456970214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATYAGVGANK_	ENSG00000178038|ENST00000318962|ALS2CL;ENST00000383742.7_2_3:46712476-46718839:-|nuORF;ENST00000434140.5_2_3:46717393-46723043:-|nuORF;ENST00000486301.5_1_3:46717393-46718248:-|nuORF;nc|ENSG00000178038|Q60I27-2|ALS2CL;nc|ENSG00000178038|Q60I27-3|ALS2CL;nc|ENSG00000178038|Q60I27-6|ALS2CL	62.107414245175825	0.3466735403679669	5				NaN	NaN	0	NaN	2294	3130	5423
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5427	19.756	NaN	1513.7	30	0	437.38	0.106				-1	 	0	45	465.2338769900384	928.4532010468769	2	465.23297119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2295	3130	5423
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5428	19.758	NaN	2124	30	0	476.24	0.106			+	1656	AGPRTLTALQ	10	47	343.20163430415374	1026.5830735126613	3	343.2012023925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AGPRTLTALQ_	REV__ENSG00000086570|ENST00000261800|FAT2;REV__FAT2|p.D4043Tfs*8|1|0.1|ENSG00000086570|chr5:151507544-151507544|C/-|frameshift_variant;REV__FAT2|p.V3716Ffs*44|1|0.22|ENSG00000086570|chr5:151521447-151521447|C/-|frameshift_variant;REV__FAT2|p.Y3462Tfs*16|1|0.37|ENSG00000086570|chr5:151525891-151525891|G/-|frameshift_variant	24.519189625965996	0.6795976720565101	5				NaN	NaN	0	NaN	2296	3130	5423
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5429	19.76	NaN	2682.9	30	0	1410	0.106	+			331	AAPTAQKSL	9	36	443.7544527451316	885.4943525570632	2	443.7530212402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AAPTAQKSL_	ENSG00000158615|ENST00000367188|PPP1R15B	31.529811441608018	0.5085848003137583	5				NaN	NaN	0	NaN	2297	3130	5423
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5430	19.761	NaN	934.89	30	0	131.67	0.036			+	38055	SPRISASVSL	10	38	339.5292663574219	NaN	0	339.5292663574219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SPRISASVSL_	REV__ENST00000421085.6_1_X:10125012-10125102:+|nuORF	40.05817265558897	0.3684561582319974	5				NaN	NaN	0	NaN	2298	3130	5423
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5442	19.787	NaN	10523	30	0	920.67	0.214				-1	 	0	66	451.7697971561586	901.5250413791172	2	451.7684326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2307	3133	5441
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5443	19.791	NaN	5516.7	30	0	1526.1	0.106				-1	 	0	49	379.2144851817525	756.414417430305	2	379.21356201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2308	3133	5441
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5444	19.793	NaN	4191.2	30	0	689.99	0.106	+			5371	ATYAGVGANK	10	48	476.2483892204616	950.4822255077232	2	476.2478332519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATYAGVGANK_	ENSG00000178038|ENST00000318962|ALS2CL;ENST00000383742.7_2_3:46712476-46718839:-|nuORF;ENST00000434140.5_2_3:46717393-46723043:-|nuORF;ENST00000486301.5_1_3:46717393-46718248:-|nuORF;nc|ENSG00000178038|Q60I27-2|ALS2CL;nc|ENSG00000178038|Q60I27-3|ALS2CL;nc|ENSG00000178038|Q60I27-6|ALS2CL	104.0567914643314	0.06564926686336217	5				NaN	NaN	0	NaN	2309	3133	5441
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5445	19.794	NaN	2000.4	30	0	181.16	0.106	+			43086	TEMGHGTHL	9	59	491.7242269236682	NaN	0	491.7240905761719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TEMGHGTHL_	ACOX1|p.N501Tfs*6|1|0.47|ENSG00000161533|chr17:75949577-75949577|T/-|frameshift_variant;ENSG00000161533|ENST00000293217|ACOX1;ENST00000591857.5_1_17:73953534-73975166:-|nuORF;nc|ENSG00000161533|Q15067-3|ACOX1;nc|ENSG00000161533|Q15067|ACOX1	60.97194046774394	0.14517358171632622	5				NaN	NaN	0	NaN	2310	3133	5441
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5446	19.796	NaN	3397.5	30	0	942.48	0.106			+	7941	DSKVIGQK	8	54	437.7530478176201	NaN	0	437.7530517578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DSKVIGQK_	REV__ENSG00000100083|ENST00000343632|GGA1;REV__GGA1|p.R485Gfs*31|1|0.44|ENSG00000100083|chr22:37631018-37631018|C/-|frameshift_variant;REV__nc|ENSG00000100083|Q9UJY5-2|GGA1;REV__nc|ENSG00000100083|Q9UJY5-3|GGA1;REV__nc|ENSG00000100083|Q9UJY5-4|GGA1;REV__nc|ENSG00000100083|Q9UJY5-6|GGA1	60.97194046774394	1.7418937515398478	5				NaN	NaN	0	NaN	2311	3133	5441
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5447	19.798	NaN	2060.5	30	0	231.97	0.036	+			37020	SIQNQMQSK	9	63	532.26416015625	NaN	0	532.26416015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SIQNQMQSK_	ENSG00000158985|ENST00000505065|CDC42SE2	83.6470233535746	0.058886874190800687	5				NaN	NaN	0	NaN	2312	3133	5441
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5448	19.799	NaN	1832.8	30	0	454.56	0.139			+	6915	CLWSSVQL	8	54	468.2374152276202	NaN	0	468.2374572753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_CLWSSVQL_	REV__CDH1|p.F462Lfs*19|1|0.16|ENSG00000039068|chr16:68815577-68815577|T/-|frameshift_variant;REV__CDH1|p.N315Kfs*6|1|0.32|ENSG00000039068|chr16:68811790-68811791|-/A|frameshift_variant;REV__CDH1|p.P126Rfs*89|3|0.3|ENSG00000039068|chr16:68801878-68801878|C/-|frameshift_variant;REV__ENSG00000039068|ENST00000261769|CDH1;REV__nc|ENSG00000039068|P12830-2|CDH1	57.81127852772723	1.7418937515398478	5				NaN	NaN	0	NaN	2313	3133	5441
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5466	19.838	NaN	8541.4	30	0	3014.4	0.214			+	24926	LKSLRHTIQ	9	59	548.3366415358123	1094.6587301384245	2	548.3359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LKSLRHTIQ_	REV__ENSG00000163424|ENST00000295622|TEX55	93.19546047674547	0.05585629608842056	5				NaN	NaN	0	NaN	2328	3136	5465
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5467	19.841	NaN	14060	30	0	2304.8	0.106				-1	 	0	74	476.26746642401196	950.5203799148239	2	476.2662048339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2329	3136	5465
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5468	19.843	NaN	2423.3	30	0	1385.7	0.106	+			39715	STIPSSNKH	9	43	485.75217533968714	969.4897977461743	2	485.7507019042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STIPSSNKH_	ZNF776|p.F217S|1|0.08|ENSG00000152443|chr19:57753780-57753780|T/C|missense_variant	39.252832667884924	0.4290233611298554	5				NaN	NaN	0	NaN	2330	3136	5465
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5469	19.845	NaN	5409.4	30	0	1497.4	0.106			+	3211	ASKSMGTGVK	10	58	483.2572446561217	964.4999363790434	2	483.2561950683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASKSMGTGVK_	REV__ENSG00000275342|ENST00000615670|PRAG1	50.033510581677724	0.4566913063131936	5				NaN	NaN	0	NaN	2331	3136	5465
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5470	19.847	NaN	2725	30	0	360.41	0.106				-1	 	0	42	332.71122946673296	663.4079060002659	2	332.7105712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2332	3136	5465
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5471	19.849	NaN	857.32	30	0	91.425	0.035			+	13336	GKQETLRR	8	42	494.2862854003906	NaN	0	494.2862854003906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GKQETLRR_	REV__ENSG00000092201|ENST00000216297|SUPT16H;REV__SUPT16H|p.Y764Cfs*2|1|0.36|ENSG00000092201|chr14:21359493-21359494|AT/-|frameshift_variant	26.69291269510374	1.7418937515398478	5				NaN	NaN	0	NaN	2333	3136	5465
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5472	19.849	NaN	885.25	30	0	146.22	0.139	+			18657	ISVGEAKKK	9	44	480.29736328125	NaN	0	480.29736328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ISVGEAKKK_	tr|U7SQZ5|U7SQZ5_FUSNUTwo-componentsystem,NtrCfamily,responseregulatorOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01729PE=4SV=1	37.15910966729921	0.2899585034171616	5				NaN	NaN	0	NaN	2334	3136	5465
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5487	19.882	NaN	4971.3	30	0	1213	0.214	+			41793	SVSQKLMAK	9	70	496.28330175552827	NaN	0	496.28350830078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSQKLMAK_	ENSG00000137200|ENST00000373451|CMTR1	109.47833844074708	0.010168233843482827	5				NaN	NaN	0	NaN	2346	3139	5486
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5488	19.886	NaN	2403.5	30	0	318.06	0.106	+			33332	RGTKAWMETE	10	69	604.7885549146445	1207.5625568960888	2	604.7888793945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RGTKAWMETE_	nc|ENSG00000165828|Q96NZ9-4|PRAP1	32.75053402867276	0.6123771875927935	5				NaN	NaN	0	NaN	2347	3139	5486
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5489	19.888	NaN	2024.5	30	0	166.97	0.106				-1	 	0	63	537.7893216882424	1073.5640904432846	2	537.7894287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2348	3139	5486
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5490	19.889	NaN	3154.2	30	0	348	0.106	+			35828	SEDAEKKVL	9	60	509.77644496183353	1017.5383369904671	2	509.7740478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SEDAEKKVL_	ENSG00000060138|ENST00000228251|YBX3;ENST00000566722.1_1_16:31580383-31580761:-|nuORF;nc|ENSG00000060138|P16989-2|YBX3;nc|ENSG00000060138|P16989-3|YBX3	120.8684288430529	0.02067403653475984	5				NaN	NaN	0	NaN	2349	3139	5486
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5491	19.891	NaN	914.72	30	0	100.38	0.106	+			8935	EEWEDTKDSKE	11	36	698.2976751230059	NaN	0	698.2973022460938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EEWEDTKDSKE_	ENSG00000162687|ENST00000294725|KCNT2;ENST00000451324.6_1_1:196197356-196228734:-|nuORF;ENST00000498426.5_1_1:196197356-196286329:-|nuORF;ENST00000610076.1_1_1:196227273-196577439:-|nuORF;nc|ENSG00000162687|Q6UVM3-2|KCNT2;nc|ENSG00000162687|Q6UVM3-3|KCNT2;nc|ENSG00000162687|Q6UVM3-4|KCNT2	33.921630207806714	0.41424167740351664	5				NaN	NaN	0	NaN	2350	3139	5486
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5492	19.893	NaN	1745.4	30	0	241.2	0.039			+	-1	RLQDEPCSGLK	11	59	651.8267946136556	1301.639036294111	2	651.8251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_RLQDEPC(Carbamidomethyl (C))SGLK_	REV__ENSG00000175121|ENST00000372789|WFDC5;REV__nc|ENSG00000175121|Q8TCV5|WFDC5	22.579656572578934	0.7529490144093228	5				NaN	NaN	0	NaN	2351	3139	5486
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5493	19.894	NaN	2665.5	30	0	396.95	0.142	+			15425	GTYQDRLTK	9	59	541.2863992451145	1080.5582455570288	2	541.2859497070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GTYQDRLTK_	ENSG00000164758|ENST00000297347|MED30;ENST00000519879.1_1_8:118533115-118541135:+|nuORF;nc|ENSG00000164758|Q96HR3-2|MED30	70.39856735676683	0.13906523160059378	5				NaN	NaN	0	NaN	2352	3139	5486
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5507	19.925	NaN	10373	30	0	1356.2	0.214				-1	 	0	73	494.27813304823263	986.5417131632653	2	494.2767028808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2363	3142	5506
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5508	19.929	NaN	9027.7	30	0	2491.9	0.106	+			44396	TSLKSIMKK	9	61	518.3160952324611	1034.617637531722	2	518.3153076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TSLKSIMKK_	ENSG00000132854|ENST00000371153|KANK4;nc|ENSG00000132854|Q5T7N3-2|KANK4	104.42354056486148	0.0346881550498418	5				NaN	NaN	0	NaN	2364	3142	5506
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5509	19.931	NaN	6009.2	30	0	809.93	0.106				-1	 	0	63	489.2937751398927	976.5729973465855	2	489.292236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2365	3142	5506
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5510	19.932	NaN	2703.5	30	0	479.49	0.106				-1	 	0	53	504.29866172145347	1006.582770509707	2	504.29632568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2366	3142	5506
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5511	19.934	NaN	1863.3	30	0	370.83	0.106	+			22650	KTYETTLEK	9	60	556.7968027114672	1111.5790524897343	2	556.7968139648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KTYETTLEK_	ALB|p.V457Wfs*25|1|0.2|ENSG00000163631|chr4:73417606-73417606|A/-|frameshift_variant;CON__P02768-1;ENSG00000163631|ENST00000295897|ALB;nc|ENSG00000163631|P02768-2|ALB	46.45678178249821	0.34452392205506005	5				NaN	NaN	0	NaN	2367	3142	5506
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5512	19.936	NaN	1087.1	30	0	82.638	0.038	+			25968	LSIQALLNAPN	11	41	385.2236475379805	NaN	0	385.2237548828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSIQALLNAPN_	nc|ENSG00000276380|Q5JXB2|UBE2NL	30.568863376406313	0.42918353898720446	5				NaN	NaN	0	NaN	2368	3142	5506
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5513	19.937	NaN	1650	30	0	323.44	0.138	+			32098	QSGALSLTT	9	44	439.23610156082447	876.457650188449	2	439.2347106933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QSGALSLTT_	nc|ENSG00000127914|Q99996-6|AKAP9	44.116797842482775	0.37197099687881774	5				NaN	NaN	0	NaN	2369	3142	5506
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5530	19.974	NaN	30288	30	0	4441.9	0.214				-1	 	0	91	511.2758093864787	1020.5370658397575	2	511.27484130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2383	3145	5529
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5531	19.977	NaN	24808	30	0	3143.8	0.106				-1	 	0	88	579.8105713247598	1157.6065897163196	2	579.8095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2384	3145	5529
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5532	19.979	NaN	17049	30	0	5193.7	0.106				-1	 	0	57	450.23364947062686	898.4527460080537	2	450.2325439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2385	3145	5529
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5533	19.981	NaN	4697.4	30	0	1212.2	0.106			+	35491	SATLSFRLL	9	42	336.5348018541873	1006.582576162762	3	336.5342712402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SATLSFRLL_	REV__ENST00000342295.5_2_4:26434435-26434762:+|nuORF	24.20275056022122	0.577060078256802	5				NaN	NaN	0	NaN	2386	3145	5529
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5534	19.983	NaN	6689.8	30	0	733.15	0.106	+			29817	PKMLKLKDGGK	11	73	405.5809284312757	1213.7209558940272	3	405.5798645019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PKMLKLKDGGK_	PHF2|p.T520M|1|0.21|ENSG00000197724|chr9:93660421-93660421|C/T|missense_variant	36.446750945000026	0.6065623449959539	5				NaN	NaN	0	NaN	2387	3145	5529
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5535	19.985	NaN	1309.4	30	0	192.07	0.036				-1	VLDMVDVLV	9	40	340.1880187988281	NaN	0	340.1880187988281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_VLDM(Oxidation (M))VDVLV_	ENSG00000142207|ENST00000382751|URB1	42.396135135203025	0.2590952873412954	5				NaN	NaN	0	NaN	2388	3145	5529
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5536	19.985	NaN	6244.8	30	0	1031.8	0.139	+			30121	PRPVPKPR	8	74	473.80116455291005	945.5877761726201	2	474.780517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PRPVPKPR_	ENSG00000140750|ENST00000289968|ARHGAP17;ENSG00000141971|ENST00000317040|MVB12A;ENST00000570320.5_1_16:24931453-24947070:-|nuORF;ENST00000575283.5_1_16:24931453-24951019:-|nuORF;nc|ENSG00000140750|Q68EM7-2|ARHGAP17;nc|ENSG00000140750|Q68EM7-3|ARHGAP17;nc|ENSG00000140750|Q68EM7-5|ARHGAP17;nc|ENSG00000140750|Q68EM7-6|ARHGAP17;nc|ENSG00000140750|Q68EM7-7|ARHGAP17;nc|ENSG00000141971|Q96EY5-3|MVB12A	33.51558372728122	0.7005509609380386	5				NaN	NaN	0	NaN	2389	3145	5529
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5550	20.016	NaN	4009.7	30	0	633.9	0.214				-1	 	0	62	473.80116455291005	945.5877761726201	2	473.7998962402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2400	3148	5549
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5551	20.02	NaN	3090.9	30	0	818.44	0.106			+	31134	QGDNNDWFV	9	59	547.7287842005387	NaN	0	547.7295532226562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QGDNNDWFV_	REV__ENSG00000119938|ENST00000238994|PPP1R3C	54.776311868738084	0.17377682019723872	5				NaN	NaN	0	NaN	2401	3148	5549
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5552	20.022	NaN	864.78	30	0	74.23	0.106				-1	WLLCRGGGDAD	11	47	610.2809448242188	NaN	0	610.2809448242188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_WLLC(Carbamidomethyl (C))RGGGDAD_	ENSG00000256043|ENST00000433477|CTSO	28.081489160057373	0.4402687122534875	5				NaN	NaN	0	NaN	2402	3148	5549
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5553	20.023	NaN	1317	30	0	288.62	0.106	+			26208	LSSDDANVL	9	42	467.2297243713647	NaN	0	467.2294616699219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSSDDANVL_	ENSG00000156587|ENST00000287156|UBE2L6	69.6276240434122	0.10825701912424071	5				NaN	NaN	0	NaN	2403	3148	5549
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5554	20.025	NaN	1454.9	30	0	311.47	0.106	+			12651	GEIKKGAP	8	39	400.23801700560614	798.4614810780123	2	400.23699951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GEIKKGAP_	tr|U7SUZ6|U7SUZ6_FUSNUCysteinesynthaseAOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01451PE=4SV=1	53.351449002276354	0.5676011784961348	5				NaN	NaN	0	NaN	2404	3148	5549
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5555	20.027	NaN	932.55	30	0	283.54	0.037			+	9807	EPEELDMRD	9	35	567.2446112163091	1132.474669499418	2	567.24365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EPEELDMRD_	REV__ENSG00000172819|ENST00000425354|RARG;REV__nc|ENSG00000172819|P13631-2|RARG;REV__nc|ENSG00000172819|P13631-3|RARG;REV__nc|ENSG00000172819|P13631-4|RARG	15.641811463095205	0.6112419832031292	5				NaN	NaN	0	NaN	2405	3148	5549
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5556	20.028	NaN	708.44	30	0	201.24	0.141	+			29629	PGDRPLYLH	9	35	534.2840576171875	NaN	0	534.2840576171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PGDRPLYLH_	ENSG00000132680|ENST00000368321|KHDC4;ENST00000466713.1_1_1:155896424-155904164:-|nuORF;nc|ENSG00000132680|Q7Z7F0-2|KHDC4;nc|ENSG00000132680|Q7Z7F0-3|KHDC4;nc|ENSG00000132680|Q7Z7F0-4|KHDC4	20.030474535948922	0.36918787600646324	5				NaN	NaN	0	NaN	2406	3148	5549
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5567	20.055	NaN	2984.6	30	0	604.58	0.214	+			2961	ASEVLKHLK	9	65	512.8118298110508	1023.6091066889015	2	512.810791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASEVLKHLK_	ENSG00000089053|ENST00000261819|ANAPC5;ENST00000534976.5_1_12:121756302-121773353:-|nuORF;ENST00000535641.5_1_12:121746285-121765135:-|nuORF;ENST00000545218.5_1_12:121756099-121775126:-|nuORF;nc|ENSG00000089053|Q9UJX4-3|ANAPC5	60.11826168202944	0.21262886028301267	5				NaN	NaN	0	NaN	2414	3151	5566
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5568	20.059	NaN	3013.4	30	0	327	0.106	+			48787	VTYNGVDNNK	10	63	562.2735395994093	1122.5325262656186	2	562.27294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTYNGVDNNK_	ENSG00000122545|ENST00000350320|SEPTIN7;ENST00000425198.1_1_7:35872473-35938044:+|nuORF;ENST00000469999.1_1_7:152065296-152065533:+|nuORF;ENST00000492940.1_1_7:35930257-35938044:+|nuORF;nc|ENSG00000122545|Q16181-2|SEPTIN7	99.78786539795823	0.07832680346773438	5				NaN	NaN	0	NaN	2415	3151	5566
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5569	20.061	NaN	2518.1	30	0	400.27	0.106				-1	 	0	55	503.78871571678025	1005.5628785003605	2	503.7882080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2416	3151	5566
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5570	20.063	NaN	1763.8	30	0	353.17	0.106			+	50088	WGLPVFGP	8	42	436.73744983604286	871.4603467388857	2	437.23724365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_WGLPVFGP_	REV__ENSG00000023041|ENST00000369405|ZDHHC6;REV__nc|ENSG00000023041|Q9H6R6-2|ZDHHC6;REV__ZDHHC6|p.G79S|1|0.06|ENSG00000023041|chr10:112445202-112445202|C/T|missense_variant	24.504012794735996	0.7701314986472447	5				NaN	NaN	0	NaN	2417	3151	5566
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5571	20.064	NaN	1767.7	30	0	1011.2	0.106			+	37658	SLQTTPSR	8	34	445.24163002911575	888.4687071250315	2	445.24072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SLQTTPSR_	REV__ENST00000525331.5_1_16:70026957-70027083:-|nuORF	37.81151784470057	0.6698925118251505	5				NaN	NaN	0	NaN	2418	3151	5566
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5572	20.066	NaN	3785.5	30	0	511.65	0.106	+			48555	VTPAGLRLTP	10	44	342.2102751457918	1023.6089960375755	3	342.209716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTPAGLRLTP_	ENSG00000170382|ENST00000367177|LRRN2	20.94693142431847	0.7087701759873708	5				NaN	NaN	0	NaN	2419	3151	5566
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5573	20.068	NaN	1739.2	30	0	265.76	0.036	+			1970	AIYGTRKFK	9	55	542.3191701878711	NaN	0	542.3191528320312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AIYGTRKFK_	ENSG00000197629|ENST00000361050|MPEG1	47.95952297671804	0.22075498469600283	5				NaN	NaN	0	NaN	2420	3151	5566
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5585	20.093	NaN	3812.3	30	0	945.51	0.214	+			36790	SICGKSFTK	9	69	514.2666234842408	1026.5186940352814	2	514.2657470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SIC(Carbamidomethyl (C))GKSFTK_	ENSG00000127081|ENST00000375495|ZNF484;nc|ENSG00000127081|Q5JVG2-2|ZNF484;nc|ENSG00000127081|Q5JVG2-3|ZNF484	74.1650062923329	0.12277912660386392	5				NaN	NaN	0	NaN	2429	3154	5584
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5586	20.097	NaN	3962.1	30	0	1020	0.106			+	37500	SLLAQLRQN	9	64	521.8051235610085	1041.5956941888169	2	521.8045043945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLLAQLRQN_	REV__ENSG00000188385|ENST00000684848|JAKMIP3;REV__nc|ENSG00000188385|Q5VZ66|JAKMIP3	34.172542307311794	0.4838870758800184	5				NaN	NaN	0	NaN	2430	3154	5584
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5587	20.099	NaN	1964.6	30	0	545.05	0.106				-1	 	0	52	490.24847095276147	489.2411944861615	1	490.2476806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2431	3154	5584
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5588	20.101	NaN	2309.3	30	0	273.7	0.106	+			20665	KGKYGVNIGK	10	59	532.317572914935	1062.62059289667	2	532.8179931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KGKYGVNIGK_	tr|U7SUI2|U7SUI2_FUSNUUPF0597proteinHMPREF1766_01169OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01169PE=3SV=1	42.86426827375447	0.522752283233888	5				NaN	NaN	0	NaN	2432	3154	5584
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5589	20.103	NaN	2648.7	30	0	254.66	0.106	+			42470	TAMNGNLAK	9	61	460.23806614872757	918.4615793642552	2	460.2368469238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TAMNGNLAK_	ENSG00000184675|ENST00000374869|AMER1	62.107414245175825	0.1960472003779324	5				NaN	NaN	0	NaN	2433	3154	5584
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5590	20.104	NaN	1244.1	30	0	340.15	0.037	+			23188	KWSLFGWND	9	54	576.7765359791972	NaN	0	576.7767333984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KWSLFGWND_	MER65-int_dup830|chr19:41731202-41731711:+|2.2615833292983227|0.0105726313913534|7.74|478.0|5|1|sense	49.536043120802724	0.20989033510253738	5				NaN	NaN	0	NaN	2434	3154	5584
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5591	20.105	NaN	4294.9	30	0	2335.6	0.145			+	48950	VVETVVEEYS	10	40	385.1925438477885	NaN	0	385.1923828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VVETVVEEYS_	REV__ENST00000395797.1_1_10:44140239-44144057:-|nuORF;REV__ENST00000485351.1_1_10:44141510-44141681:-|nuORF	23.52269567125451	0.42010282974921537	5				NaN	NaN	0	NaN	2435	3154	5584
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5604	20.135	NaN	5077.6	30	0	905.86	0.214	+			34569	RVLSSIEQK	9	71	530.3123950147956	1058.610237096391	2	530.3118286132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVLSSIEQK_	ENSG00000175793|ENST00000339276|SFN;nc|ENSG00000175793|P31947-2|SFN	109.47833844074708	0.029530294723441826	5				NaN	NaN	0	NaN	2445	3157	5603
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5605	20.138	NaN	3087.6	30	0	585.19	0.106			+	2349	AMTSRTKE	8	48	462.2338953619938	NaN	0	462.23394775390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AMTSRTKE_	REV__ENST00000576058.2_1_16:13552215-13552527:+|nuORF	67.49366992349736	1.7418937515398478	5				NaN	NaN	0	NaN	2446	3157	5603
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5606	20.14	NaN	1275.7	30	0	148.74	0.106			+	48946	VVELTIKR	8	43	479.3076171875	NaN	0	479.3076171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVELTIKR_	REV__ENSG00000170381|ENST00000643230|SEMA3E;REV__nc|ENSG00000170381|O15041-2|SEMA3E	33.51558372728122	1.7418937515398478	5				NaN	NaN	0	NaN	2447	3157	5603
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5607	20.142	NaN	2643.2	30	0	380.79	0.106			+	37548	SLLWQLRQV	9	50	381.5592215307416	NaN	0	381.5591735839844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLLWQLRQV_	REV__ENSG00000175267|ENST00000389398|VWA3A;REV__nc|ENSG00000175267|A6NCI4-2|VWA3A;REV__nc|ENSG00000175267|A6NCI4-3|VWA3A;REV__nc|ENSG00000175267|A6NCI4-4|VWA3A	44.116797842482775	0.2472372736944149	5				NaN	NaN	0	NaN	2448	3157	5603
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5608	20.144	NaN	2156.7	30	0	239.27	0.106	+			9558	ELEVGAGVHR	10	60	533.7871302749697	1065.5597076167394	2	534.287353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ELEVGAGVHR_	ENST00000597275.5_1_X:48911128-48919505:+|nuORF	47.657333605630114	0.47858658696240314	5				NaN	NaN	0	NaN	2449	3157	5603
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5609	20.146	NaN	1277.4	30	0	160.96	0.106			+	13357	GLAAAPDKVT	10	50	471.7661238651642	NaN	0	472.24053955078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GLAAAPDKVT_	REV__ENST00000341068.7_1_2:112641540-112641732:-|nuORF	39.252832667884924	0.37128895876774715	5				NaN	NaN	0	NaN	2450	3157	5603
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5610	20.147	NaN	858.97	30	0	443.97	0.034			+	46986	VKPGRAALP	9	34	454.78729643157146	NaN	0	454.7872009277344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VKPGRAALP_	REV__ENST00000593586.1_1_19:40723001-40723700:-|nuORF	12.206847966760668	0.39566704307768535	5				NaN	NaN	0	NaN	2451	3157	5603
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5627	20.183	NaN	12041	30	0	2531.8	0.214				-1	 	0	63	400.2016702900404	798.3887876468808	2	400.2007141113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2465	3160	5626
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5628	20.186	NaN	5010.5	30	0	622.01	0.106	+			4776	ATNGAKFLK	9	57	475.27766617445934	948.5407794157187	2	475.2765197753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATNGAKFLK_	ENSG00000006282|ENST00000006658|SPATA20;ENST00000503063.5_1_17:48628810-48629053:+|nuORF;ENST00000504271.1_1_17:48628191-48629053:+|nuORF;ENST00000504334.5_1_17:48627490-48633020:+|nuORF;ENST00000511937.5_1_17:48628543-48633020:+|nuORF;nc|ENSG00000006282|Q8TB22-3|SPATA20;nc|ENSG00000006282|Q8TB22|SPATA20;SPATA20|p.S677Pfs*29|1|0.12|ENSG00000006282|chr17:50554367-50554367|T/-|frameshift_variant	98.62937762414208	0.04060045538121712	5				NaN	NaN	0	NaN	2466	3160	5626
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5629	20.188	NaN	5287.6	30	0	352.25	0.106	+			18182	ILYDHAHVK	9	66	548.3022712972805	1094.589989661361	2	548.3015747070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ILYDHAHVK_	ENSG00000115758|ENST00000234111|ODC1	110.11987700582712	0.028875675806141952	5				NaN	NaN	0	NaN	2467	3160	5626
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5630	20.19	NaN	1507.9	30	0	332.05	0.106	+			20945	KKCPRESIR	9	52	558.8177070062812	1115.6208610793624	2	558.81689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KKCPRESIR_	NANOGNB|p.C151Vfs*21|1|0.43|ENSG00000205857|chr12:7770451-7770451|T/-|frameshift_variant	40.05817265558897	0.419577045485086	5				NaN	NaN	0	NaN	2468	3160	5626
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5631	20.192	NaN	16220	30	0	4367	0.106				-1	 	0	65	346.861811037707	1037.563603713321	3	346.8611755371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2469	3160	5626
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5632	20.194	NaN	3031.2	30	0	292.46	0.035	+			652	AEAEKKVQL	9	67	508.2895389681484	NaN	0	508.2879638671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEAEKKVQL_	ENSG00000144747|ENST00000398559|TMF1;nc|ENSG00000144747|P82094-2|TMF1;TMF1|p.R506I|1|0.23|ENSG00000144747|chr3:69043811-69043811|C/A|missense_variant	63.53385203322761	0.134247007536971	5				NaN	NaN	0	NaN	2470	3160	5626
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5633	20.194	NaN	3144.8	30	0	552.13	0.141	+			15456	GTYVKPLSNK	10	64	553.8147275588996	1105.614902184599	2	553.81396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GTYVKPLSNK_	ACOX1|p.N501Tfs*6|1|0.47|ENSG00000161533|chr17:75949577-75949577|T/-|frameshift_variant;ENSG00000161533|ENST00000293217|ACOX1;ENST00000589744.1_1_17:73949530-73951667:-|nuORF;nc|ENSG00000161533|Q15067-3|ACOX1;nc|ENSG00000161533|Q15067|ACOX1	123.20810148215591	0.02279876478776198	5				NaN	NaN	0	NaN	2471	3160	5626
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5648	20.228	NaN	21441	30	0	3090.9	0.214				-1	 	0	82	537.7893216882424	1073.5640904432846	2	537.7884521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2483	3163	5647
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5649	20.231	NaN	16401	30	0	3076.5	0.106				-1	 	0	62	451.6941222072444	901.3736914812888	2	451.69293212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2484	3163	5647
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5650	20.233	NaN	12535	30	0	2594.1	0.106	+			27742	MQNMSIHTK	9	77	545.2638713242171	1088.5131897152341	2	545.263427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MQNMSIHTK_	CON__H-INV:HIT000292931;CON__P05787;CON__REFSEQ:XP_092267;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	152.06079943815163	0.00638878961959199	5				NaN	NaN	0	NaN	2485	3163	5647
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5651	20.235	NaN	20608	30	0	7610.7	0.106				-1	 	0	62	358.86185604661205	1073.5637387400361	3	358.861083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2486	3163	5647
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5652	20.237	NaN	25998	30	0	6694.4	0.106	+			19346	KAKMAPGQQA	10	82	343.8547425244322	1028.5423981734966	3	343.8539733886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KAKMAPGQQA_	ARSJ|p.N431Mfs*86|1|0.09|ENSG00000180801|chr4:113902782-113902782|T/-|frameshift_variant	51.19269402634007	0.44601001148513897	5				NaN	NaN	0	NaN	2487	3163	5647
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5653	20.239	NaN	4027.7	30	0	1272.5	0.033	+			49022	VVGPVGCGK	9	54	436.73744983604286	871.4603467388857	2	436.73638916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_VVGPVGC(Carbamidomethyl (C))GK_	ABCC3|p.A658D|1|0.1|ENSG00000108846|chr17:50669175-50669175|C/A|missense_variant;ABCC3|p.L968Afs*31|1|0.33|ENSG00000108846|chr17:50675920-50675921|-/G|frameshift_variant;ENSG00000108846|ENST00000285238|ABCC3;ENST00000502426.5_1_17:48736553-48755440:+|nuORF;nc|ENSG00000108846|O15438-2|ABCC3;nc|ENSG00000108846|O15438-4|ABCC3	76.84663266511073	0.11118375776443899	5				NaN	NaN	0	NaN	2488	3163	5647
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5654	20.239	NaN	2664.8	30	0	310.4	0.14	+			48761	VTVSDHIQK	9	67	513.783813107999	1025.5530732827979	2	513.78271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VTVSDHIQK_	ENSG00000158623|ENST00000425248|COPG2	75.04331003522576	0.118981335847003	5				NaN	NaN	0	NaN	2489	3163	5647
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5669	20.273	NaN	2625.6	30	0	691.28	0.214				-1	AMSMAKGAVQG	11	61	541.7532175855653	1081.4918822379304	2	541.7525024414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_AM(Oxidation (M))SM(Oxidation (M))AKGAVQG_	ENSG00000167676|ENST00000301286|PLIN4;PLIN4|p.G1001Afs*9|1|0.16|ENSG00000167676|chr19:4510916-4510916|C/-|frameshift_variant	37.81151784470057	0.5878881669006212	5				NaN	NaN	0	NaN	2501	3166	5668
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5670	20.276	NaN	2683.4	30	0	202	0.106	+			39813	STLGGRLQAK	10	63	515.804384143769	1029.5942153543378	2	515.8038330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STLGGRLQAK_	ENSG00000178950|ENST00000314167|GAK;GAK|p.L730*|1|0.09|ENSG00000178950|chr4:870772-870772|C/-|frameshift_variant;GAK|p.P1133Lfs*23|1|0.3|ENSG00000178950|chr4:851860-851860|G/-|frameshift_variant;GAK|p.P955Lfs*36|1|0.25|ENSG00000178950|chr4:866964-866964|G/-|frameshift_variant;GAK|p.S905Pfs*40|1|0.15|ENSG00000178950|chr4:867116-867116|G/-|frameshift_variant;GAK|p.V881Gfs*39|1|0.23|ENSG00000178950|chr4:867186-867187|-/C|frameshift_variant;nc|ENSG00000178950|O14976-2|GAK	63.53385203322761	0.33370026130094593	5				NaN	NaN	0	NaN	2502	3166	5668
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5671	20.278	NaN	2265.5	30	0	268.48	0.106	+			39795	STLAVTSQK	9	50	467.76336669921875	NaN	0	467.76336669921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STLAVTSQK_	ENSG00000132549|ENST00000357162|VPS13B;nc|ENSG00000132549|Q7Z7G8-3|VPS13B;nc|ENSG00000132549|Q7Z7G8-6|VPS13B;nc|ENSG00000132549|Q7Z7G8|VPS13B;VPS13B|p.I1913*|1|0.3|ENSG00000132549|chr8:99642246-99642246|A/-|frameshift_variant;VPS13B|p.M3156Ifs*2|1|0.07|ENSG00000132549|chr8:99832427-99832428|-/TA|frameshift_variant;VPS13B|p.S3988Lfs*4|1|0.55|ENSG00000132549|chr8:99875552-99875553|-/C|frameshift_variant;VPS13B|p.S3988Pfs*25|1|0.11|ENSG00000132549|chr8:99875553-99875553|C/-|frameshift_variant	35.15202426646627	0.3000918603816441	5				NaN	NaN	0	NaN	2503	3166	5668
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5672	20.28	NaN	5478.1	30	0	994.53	0.106				-1	 	0	66	457.78796678177235	913.5613806303447	2	457.7868347167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2504	3166	5668
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5673	20.282	NaN	1278	30	0	154.08	0.106	+			35569	SAYAFSHQR	9	51	533.75732421875	NaN	0	533.75732421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SAYAFSHQR_	ENSG00000081923|ENST00000648908|ATP8B1	55.08391021199286	0.17165699430885212	5				NaN	NaN	0	NaN	2505	3166	5668
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5674	20.283	NaN	1451.6	30	0	351.28	0.037			+	8908	EEVEPFLRM	9	49	575.2822265625	NaN	0	575.2822265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EEVEPFLRM_	REV__ENST00000338272.8_1_1:109638293-109638542:+|nuORF	35.15202426646627	0.3000918603816441	5				NaN	NaN	0	NaN	2506	3166	5668
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5675	20.284	NaN	1082.5	30	0	159.96	0.14				-1	CGRVEGTGPE	10	49	531.2382202148438	NaN	0	531.2382202148438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_C(Carbamidomethyl (C))GRVEGTGPE_	ENST00000464942.6_1_12:122710297-122710606:-|nuORF	42.86426827375447	0.3507156137006061	5				NaN	NaN	0	NaN	2507	3166	5668
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5690	20.317	NaN	3677.7	30	0	531.4	0.214	+			35283	SALTDKAIVKK	11	70	587.3653112745666	1172.716069615933	2	587.3638305664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SALTDKAIVKK_	ENSG00000176485|ENST00000415826|PLAAT3;ENST00000394613.3_1_11:63342419-63381578:-|nuORF	109.38876744936951	0.041277168889090256	5				NaN	NaN	0	NaN	2519	3169	5689
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5691	20.321	NaN	2257	30	0	417.62	0.106	+			42076	SYEHVPAW	8	58	494.7275713817033	NaN	0	494.7274169921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SYEHVPAW_	ENST00000246672.3_1_17:38251239-38251841:-|nuORF	28.2542754592877	1.7418937515398478	5				NaN	NaN	0	NaN	2520	3169	5689
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5692	20.323	NaN	1493.9	30	0	237.06	0.106	+			29766	PHYHSFDG	8	55	480.20533299889615	958.3961130645923	2	480.2038879394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PHYHSFDG_	ENSG00000275395|ENST00000616721|FCGBP;ENSG00000275395|ENST00000616721|FCGBP;FCGBP-ACSS2|1|fusion;FCGBP-ACSS2|1|fusion;nc|ENSG00000275395|Q9Y6R7|FCGBP;nc|ENSG00000275395|Q9Y6R7|FCGBP;nc|ENSG00000275395|Q9Y6R7|FCGBP	101.21157088398209	0.2500103534009131	5				NaN	NaN	0	NaN	2521	3169	5689
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5693	20.325	NaN	1122.6	30	0	117.96	0.106	+			46829	VIEFSEEY	8	46	508.2333068847656	NaN	0	508.2333068847656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VIEFSEEY_	ENSG00000119048|ENST00000265339|UBE2B	44.53106598305862	1.7418937515398478	5				NaN	NaN	0	NaN	2522	3169	5689
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5694	20.327	NaN	3440.5	30	0	413.5	0.106	+			48352	VTGNFILRK	9	65	524.3204888816737	1046.6264248301472	2	524.3200073242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTGNFILRK_	ENSG00000167196|ENST00000308275|FBXO22;FBXO22|p.R367W|1|0.24|ENSG00000167196|chr15:75932989-75932989|C/T|missense_variant	41.42661286455405	0.403525789677298	5				NaN	NaN	0	NaN	2523	3169	5689
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5695	20.328	NaN	1591.2	30	0	204.49	0.034				-1	 	0	50	483.77309448552387	965.5316360378478	2	483.7716979980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2524	3169	5689
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5696	20.329	NaN	937.89	30	0	141.39	0.141			+	-1	TPCVFTFDL	9	39	550.258544921875	NaN	0	550.258544921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_TPC(Carbamidomethyl (C))VFTFDL_	REV__ENSG00000117450|ENST00000319248|PRDX1;REV__ENSG00000123131|ENST00000379341|PRDX4;REV__ENSG00000165672|ENST00000298510|PRDX3;REV__ENSG00000167815|ENST00000301522|PRDX2;REV__ENST00000450181.1_1_13:30870304-30870610:+|nuORF;REV__ENST00000466174.5_1_19:12911560-12912565:-|nuORF;REV__ENST00000477555.1_1_19:12910938-12912565:-|nuORF;REV__nc|ENSG00000165672|P30048-2|PRDX3;REV__nc|ENSG00000167815|P32119-2|PRDX2;REV__PRDX3|p.P101S|1|0.26|ENSG00000165672|chr10:119174461-119174461|G/A|missense_variant	24.20275056022122	0.35506675290109213	5				NaN	NaN	0	NaN	2525	3169	5689
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5710	20.36	NaN	5143.6	30	0	1091.6	0.214	+			27142	MATPARAP	8	51	415.7140453019999	829.4135376707998	2	415.71331787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))ATPARAP_	ENST00000299638.7_2_15:57998859-58000941:+|nuORF;ENST00000380557.4_2_15:57998925-58001412:+|nuORF;ENST00000567643.1_1_15:57998925-57999700:+|nuORF;nc|ENSG00000255529|Q6EEV4-2|POLR2M;nc|ENSG00000255529|Q6EEV4|POLR2M	54.76467175910256	0.5536104764165384	5				NaN	NaN	0	NaN	2536	3172	5709
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5711	20.363	NaN	2228.2	30	0	203.41	0.106	+			41294	SVLLWIAVA	9	58	486.2991592328221	970.5837655324442	2	486.2980651855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVLLWIAVA_	ENSG00000123104|ENST00000381340|ITPR2	66.42927471994793	0.16001998865088202	5				NaN	NaN	0	NaN	2537	3172	5709
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5712	20.365	NaN	2300.5	30	0	780.33	0.106	+			36320	SESMANRDA	9	40	490.7081230172742	979.4016931013484	2	490.7070007324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SESMANRDA_	ENSG00000165914|ENST00000328459|TTC7B;nc|ENSG00000165914|Q86TV6-2|TTC7B	34.172542307311794	0.4838870758800184	5				NaN	NaN	0	NaN	2538	3172	5709
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5713	20.367	NaN	8786.8	30	0	755.58	0.106	+			9900	EQMLQQALQ	9	72	544.7735183531464	1087.5324837730927	2	544.773193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EQMLQQALQ_	ENSG00000206559|ENST00000383768|ZCWPW2;ZCWPW2|p.K303Sfs*25|1|0.18|ENSG00000206559|chr3:28521112-28521112|A/-|frameshift_variant	66.96192283764107	0.15557981141143568	5				NaN	NaN	0	NaN	2539	3172	5709
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5714	20.369	NaN	1668.8	30	0	314.01	0.106	+			31133	QGDNLDRCSS	10	45	547.7287842005387	NaN	0	547.7301635742188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QGDNLDRCSS_	ENSG00000204536|ENST00000396268|CCHCR1;nc|ENSG00000204536|Q8TD31-3|CCHCR1;nc|ENSG00000204536|Q8TD31|CCHCR1	39.252832667884924	0.37128895876774715	5				NaN	NaN	0	NaN	2540	3172	5709
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5715	20.371	NaN	1190.3	30	0	133.37	0.035	+			48447	VTKYSEKSP	9	49	519.7777386312038	NaN	0	519.7784423828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTKYSEKSP_	sp|F5HGT1|MCP_HCMVMMajorcapsidproteinOS=Humancytomegalovirus(strainMerlin)OX=295027GN=MCPPE=3SV=1;sp|P16729|MCP_HCMVAMajorcapsidproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=MCPPE=1SV=1	52.936696900407355	0.1864545979552969	5				NaN	NaN	0	NaN	2541	3172	5709
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5716	20.371	NaN	927.95	30	0	128.07	0.141	+			2595	AQGKDAYELE	10	42	562.2655163997816	NaN	0	562.2658081054688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AQGKDAYELE_	ENSG00000133030|ENST00000651222|MPRIP;nc|ENSG00000133030|Q6WCQ1-2|MPRIP;nc|ENSG00000133030|Q6WCQ1-3|MPRIP;nc|ENSG00000133030|Q6WCQ1|MPRIP	20.94693142431847	0.4201028297492154	5				NaN	NaN	0	NaN	2542	3172	5709
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5729	20.401	NaN	10458	30	0	5744.2	0.214				-1	 	0	44	334.1802349595964	999.5188754789892	3	334.1795959472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2552	3175	5728
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5730	20.404	NaN	8067.2	30	0	2221.7	0.106				-1	EAIRPMNEL	9	45	363.5179705851547	1087.5320823556642	3	363.5171203613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_EAIRPM(Oxidation (M))NEL_	tr|U7SER8|U7SER8_FUSNUHsp33-likeproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02335PE=4SV=1	32.81241826257853	0.4965981579233955	5				NaN	NaN	0	NaN	2553	3175	5728
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5731	20.406	NaN	9613.7	30	0	4689.5	0.106				-1	 	0	54	366.2296922830378	1095.6672474493134	3	366.2287292480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2554	3175	5728
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5732	20.408	NaN	1774.1	30	0	311	0.106			+	-1	ELTLRQMK	8	55	517.7861809585631	1033.5578089839262	2	517.784912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_ELTLRQM(Oxidation (M))K_	REV__ENSG00000133997|ENST00000256379|MED6;REV__ENST00000553611.5_1_14:71060082-71067354:-|nuORF;REV__ENST00000554870.5_1_14:71059985-71067354:-|nuORF;REV__ENST00000556044.5_1_14:71060086-71067354:-|nuORF;REV__ENST00000556423.1_1_14:71063310-71067354:-|nuORF;REV__ENST00000556495.5_1_14:71059591-71067354:-|nuORF;REV__nc|ENSG00000133997|O75586-2|MED6;REV__nc|ENSG00000133997|O75586-3|MED6	38.80614096846853	0.6637206697844082	5				NaN	NaN	0	NaN	2555	3175	5728
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5733	20.41	NaN	3213	30	0	726.05	0.106			+	13241	GILHRHFK	8	32	336.5349000586357	1006.582870776107	3	336.8680419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GILHRHFK_	REV__ENSG00000115677|ENST00000310931|HDLBP;REV__HDLBP|p.S551Kfs*2|1|0.11|ENSG00000115677|chr2:241248082-241248083|-/T|frameshift_variant;REV__nc|ENSG00000115677|Q00341-2|HDLBP	15.63621529709179	0.7929342111279789	5				NaN	NaN	0	NaN	2556	3175	5728
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5734	20.412	NaN	2415.1	30	0	514.06	0.106			+	50238	WPGGPPLLVA	10	49	503.7877414601479	NaN	0	503.787353515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_WPGGPPLLVA_	REV__ENSG00000124587|ENST00000304611|PEX6;REV__nc|ENSG00000124587|Q13608-2|PEX6;REV__nc|ENSG00000124587|Q13608-3|PEX6	47.657333605630114	0.3204131577145918	5				NaN	NaN	0	NaN	2557	3175	5728
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5735	20.413	NaN	2316.1	30	0	232.32	0.034				-1	 	0	62	454.2725928837956	906.5306328343912	2	454.2711181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2558	3175	5728
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5748	20.441	NaN	10964	30	0	1744.8	0.214				-1	 	0	66	437.24423654047877	872.4739201477576	2	437.2429504394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2568	3178	5747
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5749	20.444	NaN	2443.4	30	0	446.39	0.106	+			29995	PPGPWPSF	8	53	442.7194864242584	883.4244199153168	2	442.71844482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PPGPWPSF_	ENST00000394361.8_1_16:57596005-57608989:+|nuORF	37.028477286268924	0.6747514403204248	5				NaN	NaN	0	NaN	2569	3178	5747
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5750	20.446	NaN	2151.9	30	0	819.91	0.106			+	-1	VSKRKPCIQKG	11	44	434.2543077231606	1299.7410937696818	3	434.2532043457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_VSKRKPC(Carbamidomethyl (C))IQKG_	REV__KCTD8|p.A396Hfs*39|2|0.35|ENSG00000183783|chr4:44175027-44175027|T/-|frameshift_variant	24.231819034082204	0.7356191775841856	5				NaN	NaN	0	NaN	2570	3178	5747
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5751	20.448	NaN	2053.3	30	0	893.99	0.106	+			36991	SIPEKNRPL	9	48	527.307179049978	1052.599805166756	2	527.8096923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SIPEKNRPL_	ENSG00000178700|ENST00000314636|DHFR2;ENSG00000228716|ENST00000439211|DHFR;ENST00000513048.5_1_5:79929804-79945299:-|nuORF;ENST00000513314.1_1_5:79945206-79949851:-|nuORF;nc|ENSG00000228716|P00374-2|DHFR	42.396135135203025	0.392153681582562	5				NaN	NaN	0	NaN	2571	3178	5747
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5752	20.45	NaN	1861.7	30	0	446.35	0.106	+			34723	RVYGGLTTK	9	61	497.7848112966079	NaN	0	497.7840576171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RVYGGLTTK_	ENSG00000170248|ENST00000307296|PDCD6IP;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP	68.84614121027924	0.11159004992091766	5				NaN	NaN	0	NaN	2572	3178	5747
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5753	20.452	NaN	2629	30	0	502.1	0.036			+	46053	VCGGKLEKFP	10	44	359.8612427592779	NaN	0	359.86126708984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VCGGKLEKFP_	REV__ENSG00000127928|ENST00000248572|GNGT1;REV__ENST00000455502.5_1_7:93540047-93540227:+|nuORF	30.317721548370564	0.4006274431774794	5				NaN	NaN	0	NaN	2573	3178	5747
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5754	20.452	NaN	980.4	30	0	149.01	0.137	+			33725	RPGTSSSL	8	36	402.7152217458553	803.4158905585106	2	402.7139587402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RPGTSSSL_	ENSG00000167702|ENST00000645548|KIFC2;nc|ENSG00000167702|Q96AC6-2|KIFC2;nc|ENSG00000167702|Q96AC6|KIFC2	56.72105179125745	0.5342425954139568	5				NaN	NaN	0	NaN	2574	3178	5747
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5769	20.485	NaN	13285	30	0	2700.1	0.214				-1	 	0	79	493.75736394803687	985.5001749628738	2	493.756103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2586	3181	5768
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5770	20.489	NaN	2536	30	0	423.58	0.106			+	45047	TVGHEVQIK	9	56	505.7853199818433	NaN	0	505.7850341796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVGHEVQIK_	REV__ENSG00000133056|ENST00000684373|PIK3C2B;REV__PIK3C2B|p.S1150L|1|0.14|ENSG00000133056|chr1:204439002-204439002|G/A|missense_variant	62.107414245175825	0.1403307765918332	5				NaN	NaN	0	NaN	2587	3181	5768
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5771	20.491	NaN	3137.4	30	0	1506.4	0.106	+			29984	PPEREQKIQ	9	54	562.807553453578	1123.6005539739558	2	562.8065795898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PPEREQKIQ_	CNTN6|p.W320R|1|0.61|ENSG00000134115|chr3:1325826-1325826|T/A|missense_variant	58.78195531508484	0.22376836668196862	5				NaN	NaN	0	NaN	2588	3181	5768
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5772	20.492	NaN	1913	30	0	510.65	0.106	+			34673	RVSEVLQNR	9	64	550.8124575291938	NaN	0	550.8120727539062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RVSEVLQNR_	ENSG00000197586|ENST00000376652|ENTPD6;ENST00000471478.1_1_20:25196340-25204798:+|nuORF;ENST00000485936.5_1_20:25203457-25206230:+|nuORF;nc|ENSG00000197586|O75354-2|ENTPD6;nc|ENSG00000197586|O75354-3|ENTPD6	80.45461616416974	0.0698259577396595	5				NaN	NaN	0	NaN	2589	3181	5768
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5773	20.494	NaN	1612.7	30	0	718.95	0.106			+	8449	EARPLVAAQV	10	48	527.307179049978	1052.599805166756	2	527.3062133789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EARPLVAAQV_	REV__ENSG00000140464|ENST00000268058|PML;REV__nc|ENSG00000140464|P29590-11|PML	31.529811441608018	0.6223461015008678	5				NaN	NaN	0	NaN	2590	3181	5768
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5774	20.496	NaN	2370.4	30	0	695.55	0.034			+	45868	VAMMLHQA	8	43	458.723425442534	915.432297951868	2	458.7223205566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_VAM(Oxidation (M))MLHQA_	REV__ENSG00000153292|ENST00000371253|ADGRF1	49.21078951299608	0.5991576752473486	5				NaN	NaN	0	NaN	2591	3181	5768
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5775	20.496	NaN	2102.3	30	0	662.77	0.142			+	-1	RLGTLTCTL	9	46	345.5266770697861	1033.5582018095583	3	345.52593994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_RLGTLTC(Carbamidomethyl (C))TL_	REV__nc|ENSG00000211890|P01877-1|IGHA2;REV__nc|ENSG00000211890|P01877|IGHA2;REV__nc|ENSG00000211895|P01876-1|IGHA1;REV__nc|ENSG00000211895|P01876|IGHA1	22.579656572578934	0.5922287541734749	5				NaN	NaN	0	NaN	2592	3181	5768
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5789	20.528	NaN	7224.3	30	0	1358.1	0.214				-1	 	0	81	507.30971224876714	1012.6048715643343	2	507.3087463378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2603	3184	5788
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5790	20.531	NaN	5818.6	30	0	961.08	0.106			+	22395	KTILMRPEG	9	69	530.7942277140877	1059.5739024949753	2	530.7935180664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_KTILM(Oxidation (M))RPEG_	REV__ENSG00000189023|ENST00000399988|MAGEB16	64.20726635412375	0.17854274437659667	5				NaN	NaN	0	NaN	2604	3184	5788
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5791	20.533	NaN	5929.2	30	0	1503.2	0.106				-1	 	0	54	458.75955318643224	915.5045534396645	2	458.75830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2605	3184	5788
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5792	20.535	NaN	2852.5	30	0	1128.4	0.106	+			14329	GSYSKAFAR	9	37	329.50659183442394	NaN	0	329.5066833496094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GSYSKAFAR_	ENSG00000005175|ENST00000005386|RPAP3;nc|ENSG00000005175|Q9H6T3-2|RPAP3;nc|ENSG00000005175|Q9H6T3-3|RPAP3	24.519189625965996	0.35377483217337163	5				NaN	NaN	0	NaN	2606	3184	5788
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5793	20.537	NaN	2653.2	30	0	494.06	0.106			+	47690	VSEGAHYI	8	54	438.21599186717674	874.4174308011535	2	438.21435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSEGAHYI_	REV__ENSG00000140015|ENST00000322893|KCNH5;REV__ENSG00000143473|ENST00000271751|KCNH1;REV__KCNH1|p.G827Afs*48|1|0.38|ENSG00000143473|chr1:210683771-210683771|C/-|frameshift_variant;REV__nc|ENSG00000140015|Q8NCM2-2|KCNH5;REV__nc|ENSG00000140015|Q8NCM2-3|KCNH5;REV__nc|ENSG00000143473|O95259-2|KCNH1	44.53106598305862	0.628196326904373	5				NaN	NaN	0	NaN	2607	3184	5788
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5794	20.539	NaN	1081.1	30	0	158.09	0.037	+			20357	KESHEMGQAL	10	44	565.2687306707207	NaN	0	565.26904296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KESHEMGQAL_	ENSG00000076382|ENST00000321765|SPAG5;SPAG5|p.N715Tfs*4|1|0.09|ENSG00000076382|chr17:28584669-28584669|T/-|frameshift_variant	38.714083909724	0.3730579431520092	5				NaN	NaN	0	NaN	2608	3184	5788
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5795	20.539	NaN	1420.4	30	0	436.81	0.14			+	-1	SLSNCLNHV	9	44	522.2503044757079	1042.4860560182158	2	522.2487182617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_SLSNC(Carbamidomethyl (C))LNHV_	REV__ENSG00000175581|ENST00000310614|MRPL48;REV__ENST00000543374.1_1_11:73555872-73556061:+|nuORF;REV__ENST00000544140.5_1_11:73555872-73571072:+|nuORF;REV__nc|ENSG00000175581|Q96GC5-3|MRPL48	23.04248740728303	0.5879033540491928	5				NaN	NaN	0	NaN	2609	3184	5788
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5805	20.563	NaN	15221	30	0	11065	0.214				-1	 	0	53	439.2254974501671	876.4364419671342	2	439.22418212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2616	3187	5804
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5806	20.567	NaN	11012	30	0	4316.3	0.106				-1	 	0	57	425.23846270599955	848.4623724787991	2	425.2373352050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2617	3187	5804
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5807	20.569	NaN	14286	30	0	5613.2	0.106				-1	 	0	44	338.5421764425213	1012.6046999277639	3	338.5415344238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2618	3187	5804
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5808	20.57	NaN	4843.9	30	0	1742.8	0.106			+	-1	MEPMKFKPG	9	64	548.7612246023468	1095.5078962714936	2	548.7605590820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Oxidation (M)	_M(Oxidation (M))EPM(Oxidation (M))KFKPG_	REV__AHNAK|p.K2311Rfs*11|1|0.33|ENSG00000124942|chr11:62527487-62527487|G/-|frameshift_variant;REV__AHNAK|p.K2311Rfs*11|1|0.33|ENSG00000124942|chr11:62527487-62527487|G/-|frameshift_variant;REV__AHNAK|p.K2311Rfs*11|1|0.33|ENSG00000124942|chr11:62527487-62527487|G/-|frameshift_variant;REV__AHNAK|p.K2311Rfs*11|1|0.33|ENSG00000124942|chr11:62527487-62527487|G/-|frameshift_variant;REV__AHNAK|p.K2311Rfs*11|1|0.33|ENSG00000124942|chr11:62527487-62527487|G/-|frameshift_variant;REV__AHNAK|p.K2311Rfs*11|1|0.33|ENSG00000124942|chr11:62527487-62527487|G/-|frameshift_variant;REV__AHNAK|p.K2311Rfs*11|1|0.33|ENSG00000124942|chr11:62527487-62527487|G/-|frameshift_variant;REV__AHNAK|p.K2311Rfs*11|1|0.33|ENSG00000124942|chr11:62527487-62527487|G/-|frameshift_variant;REV__AHNAK|p.K2311Rfs*11|1|0.33|ENSG00000124942|chr11:62527487-62527487|G/-|frameshift_variant;REV__AHNAK|p.K2311Rfs*11|1|0.33|ENSG00000124942|chr11:62527487-62527487|G/-|frameshift_variant;REV__AHNAK|p.K2311Rfs*11|1|0.33|ENSG00000124942|chr11:62527487-62527487|G/-|frameshift_variant;REV__AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;REV__AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;REV__AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;REV__AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;REV__AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;REV__AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;REV__AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;REV__AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;REV__AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;REV__AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;REV__AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;REV__AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;REV__AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;REV__AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;REV__AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;REV__AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;REV__AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;REV__AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;REV__AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;REV__AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;REV__AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;REV__AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;REV__AHNAK|p.L2105F|1|0.09|ENSG00000124942|chr11:62528104-62528104|G/A|missense_variant;REV__AHNAK|p.L2124Ifs*37|1|0.04|ENSG00000124942|chr11:62528048-62528049|-/ATGCCTGATA|frameshift_variant;REV__AHNAK|p.L2124Ifs*37|1|0.04|ENSG00000124942|chr11:62528048-62528049|-/ATGCCTGATA|frameshift_variant;REV__AHNAK|p.L2124Ifs*37|1|0.04|ENSG00000124942|chr11:62528048-62528049|-/ATGCCTGATA|frameshift_variant;REV__AHNAK|p.L2124Ifs*37|1|0.04|ENSG00000124942|chr11:62528048-62528049|-/ATGCCTGATA|frameshift_variant;REV__AHNAK|p.L2124Ifs*37|1|0.04|ENSG00000124942|chr11:62528048-62528049|-/ATGCCTGATA|frameshift_variant;REV__AHNAK|p.L2124Ifs*37|1|0.04|ENSG00000124942|chr11:62528048-62528049|-/ATGCCTGATA|frameshift_variant;REV__AHNAK|p.L2124Ifs*37|1|0.04|ENSG00000124942|chr11:62528048-62528049|-/ATGCCTGATA|frameshift_variant;REV__AHNAK|p.L2124Ifs*37|1|0.04|ENSG00000124942|chr11:62528048-62528049|-/ATGCCTGATA|frameshift_variant;REV__AHNAK|p.L2124Ifs*37|1|0.04|ENSG00000124942|chr11:62528048-62528049|-/ATGCCTGATA|frameshift_variant;REV__AHNAK|p.S1888Qfs*8|1|0.11|ENSG00000124942|chr11:62528755-62528756|-/G|frameshift_variant;REV__AHNAK|p.S1888Qfs*8|1|0.11|ENSG00000124942|chr11:62528755-62528756|-/G|frameshift_variant;REV__AHNAK|p.S1888Qfs*8|1|0.11|ENSG00000124942|chr11:62528755-62528756|-/G|frameshift_variant;REV__AHNAK|p.S1888Qfs*8|1|0.11|ENSG00000124942|chr11:62528755-62528756|-/G|frameshift_variant;REV__AHNAK|p.S1888Qfs*8|1|0.11|ENSG00000124942|chr11:62528755-62528756|-/G|frameshift_variant;REV__AHNAK|p.S1888Qfs*8|1|0.11|ENSG00000124942|chr11:62528755-62528756|-/G|frameshift_variant;REV__AHNAK|p.S1888Qfs*8|1|0.11|ENSG00000124942|chr11:62528755-62528756|-/G|frameshift_variant;REV__AHNAK|p.S1888Qfs*8|1|0.11|ENSG00000124942|chr11:62528755-62528756|-/G|frameshift_variant;REV__ENSG00000124942|ENST00000378024|AHNAK;REV__ENSG00000124942|ENST00000378024|AHNAK;REV__ENSG00000124942|ENST00000378024|AHNAK;REV__ENSG00000124942|ENST00000378024|AHNAK;REV__ENSG00000124942|ENST00000378024|AHNAK;REV__ENSG00000124942|ENST00000378024|AHNAK;REV__ENSG00000124942|ENST00000378024|AHNAK;REV__ENSG00000124942|ENST00000378024|AHNAK;REV__ENSG00000124942|ENST00000378024|AHNAK;REV__ENSG00000124942|ENST00000378024|AHNAK;REV__ENSG00000124942|ENST00000378024|AHNAK;REV__ENSG00000124942|ENST00000378024|AHNAK;REV__ENSG00000124942|ENST00000378024|AHNAK;REV__ENSG00000124942|ENST00000378024|AHNAK;REV__ENSG00000124942|ENST00000378024|AHNAK;REV__ENSG00000124942|ENST00000378024|AHNAK;REV__ENSG00000124942|ENST00000378024|AHNAK;REV__ENSG00000124942|ENST00000378024|AHNAK;REV__ENSG00000124942|ENST00000378024|AHNAK;REV__ENSG00000124942|ENST00000378024|AHNAK;REV__ENSG00000124942|ENST00000378024|AHNAK;REV__ENSG00000124942|ENST00000378024|AHNAK	35.61828744233558	0.47037581924408073	5				NaN	NaN	0	NaN	2619	3187	5804
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5809	20.572	NaN	8334.4	30	0	1757.6	0.106				-1	 	0	48	326.53507868375164	976.5834066514549	3	326.5345764160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2620	3187	5804
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5810	20.574	NaN	5254.7	30	0	1356.7	0.106				-1	 	0	43	332.538647995319	994.594114586157	3	332.5380554199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2621	3187	5804
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5811	20.576	NaN	1665.2	30	0	181.61	0.033			+	45726	VAAWPTPL	8	52	427.74136935008323	853.4681857669665	2	427.7400817871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VAAWPTPL_	REV__IRF2BPL|p.G244Vfs*101|1|0.32|ENSG00000119669|chr14:77027062-77027062|C/-|frameshift_variant	37.028477286268924	0.6747514403204248	5				NaN	NaN	0	NaN	2622	3187	5804
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5825	20.606	NaN	4540.7	30	0	1502.8	0.214				-1	 	0	48	432.24639831914544	862.4782437050909	2	432.2452087402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2633	3190	5824
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5826	20.609	NaN	2226.5	30	0	195.1	0.106				-1	TLVSFCEV	8	57	477.7354431152344	NaN	0	477.7354431152344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_TLVSFC(Carbamidomethyl (C))EV_	ENST00000225737.10_1_17:19844264-19845154:-|nuORF	42.47446043378293	1.7418937515398478	5				NaN	NaN	0	NaN	2634	3190	5824
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5827	20.611	NaN	4297.9	30	0	538.11	0.106			+	17582	IECVNPKEV	9	67	515.7663115522245	1029.5180701712488	2	515.765869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IECVNPKEV_	REV__ENST00000263464.7_1_11:102193411-102193507:+|nuORF	49.44154591367651	0.3095138337212152	5				NaN	NaN	0	NaN	2635	3190	5824
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5828	20.613	NaN	4712	30	0	1179.7	0.106				-1	 	0	70	486.8092021016292	971.6038512700584	2	486.8078308105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2636	3190	5824
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5829	20.615	NaN	3476.2	30	0	750.47	0.106	+			10192	ETDEKALEA	9	61	503.2386652424488	1004.4627775516976	2	503.23736572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ETDEKALEA_	ENSG00000170748|ENST00000306904|RBMXL2	40.77816245573522	0.41113185337114944	5				NaN	NaN	0	NaN	2637	3190	5824
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5830	20.617	NaN	1450.5	30	0	117.86	0.031	+			1722	AGYGGSVP	8	45	354.1722039754203	706.3298550176406	2	354.17169189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AGYGGSVP_	ENSG00000115598|ENST00000264257|IL1RL2;nc|ENSG00000115598|Q9HB29-2|IL1RL2	28.2542754592877	0.7411748056684583	5				NaN	NaN	0	NaN	2638	3190	5824
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5831	20.617	NaN	1549.8	30	0	271	0.137	+			45716	VAAPRPPQ	8	39	418.24374538960836	834.4729378460167	2	418.2428283691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VAAPRPPQ_	ENST00000398204.8_1_7:87563626-87563767:+|nuORF	28.2542754592877	0.7411748056684583	5				NaN	NaN	0	NaN	2639	3190	5824
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5848	20.653	NaN	167320	30	0	40663	0.214	+			5532	AVAIKAMAK	9	94	451.7788798669974	901.5432068007948	2	451.7778625488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVAIKAMAK_	EIF5A|p.A145P|1|0.15|ENSG00000132507|chr17:7311608-7311608|G/C|missense_variant;ENSG00000132507|ENST00000336458|EIF5A;ENSG00000253626|ENST00000520547|EIF5AL1;nc|ENSG00000132507|P63241-2|EIF5A	116.90359126533652	0.02307425081617795	5				NaN	NaN	0	NaN	2653	3193	5847
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5849	20.657	NaN	5845.3	30	0	1659.9	0.106				-1	 	0	59	421.26719044805077	840.5198279629016	2	421.2661437988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2654	3193	5847
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5850	20.659	NaN	1819.4	30	0	135.44	0.106				-1	EMELDELLK	9	50	568.2798945988515	NaN	0	568.280029296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_EM(Oxidation (M))ELDELLK_	ENSG00000153707|ENST00000381196|PTPRD;nc|ENSG00000153707|P23468-2|PTPRD;nc|ENSG00000153707|P23468-3|PTPRD;nc|ENSG00000153707|P23468-4|PTPRD;nc|ENSG00000153707|P23468-5|PTPRD;nc|ENSG00000153707|P23468-6|PTPRD;nc|ENSG00000153707|P23468-7|PTPRD	25.57405402267927	0.3484490411150625	5				NaN	NaN	0	NaN	2655	3193	5847
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5851	20.661	NaN	3165.3	30	0	416.08	0.106	+			41825	SVSTFLKKK	9	59	519.3220206771899	1036.6294884211798	2	519.3213500976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVSTFLKKK_	DDX60|p.F1672Lfs*25|1|0.08|ENSG00000137628|chr4:168220678-168220678|A/-|frameshift_variant;DDX60|p.T1194Pfs*8|1|0.22|ENSG00000137628|chr4:168252634-168252634|T/-|frameshift_variant;ENSG00000137628|ENST00000393743|DDX60	45.02220120713402	0.3613509778819777	5				NaN	NaN	0	NaN	2656	3193	5847
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5852	20.663	NaN	2339.4	30	0	327.23	0.106	+			20888	KIQETFAQK	9	65	546.8070511699882	1091.5995494067763	2	546.806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KIQETFAQK_	ENST00000519940.5_1_19:48735037-48741646:-|nuORF	134.7655990226056	0.012935733000282069	5				NaN	NaN	0	NaN	2657	3193	5847
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5853	20.664	NaN	3006.6	30	0	1152.8	0.036				-1	 	0	35	346.55064602578074	1036.6301086775422	3	346.5499572753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2658	3193	5847
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5854	20.665	NaN	11056	30	0	4222.2	0.143	+			372	AARHAHKPALR	11	45	409.911228956781	1226.711857470543	3	409.90997314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AARHAHKPALR_	ENST00000429224.1_1_9:139440803-139442492:+|nuORF	35.17822180527639	0.6208003396870814	5				NaN	NaN	0	NaN	2659	3193	5847
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5871	20.701	NaN	18919	30	0	3532.6	0.214				-1	 	0	79	509.3014662572402	1016.5883795812804	2	509.3005065917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2673	3196	5870
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5872	20.705	NaN	44256	30	0	7348	0.106				-1	NLLLEMSAVV	10	87	368.87053384836804	1103.589772145304	3	368.8697204589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_NLLLEM(Oxidation (M))SAVV_	ENSG00000104884|ENST00000391945|ERCC2;ENST00000391942.6_1_19:45854889-45865127:-|nuORF;ENST00000588652.5_1_19:45854889-45860860:-|nuORF	54.722347961057174	0.4138398245444204	5				NaN	NaN	0	NaN	2674	3196	5870
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5873	20.707	NaN	18030	30	0	3369.4	0.106				-1	VQLEIDIKM	9	76	552.8020734124995	1103.5895938917988	2	552.8013305664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_VQLEIDIKM(Oxidation (M))_	TWF1|p.N209Mfs*4|1|0.19|ENSG00000151239|chr12:43797436-43797436|T/-|frameshift_variant	77.31757898189308	0.1091473830098891	5				NaN	NaN	0	NaN	2675	3196	5870
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5874	20.709	NaN	1480	30	0	104.06	0.106				-1	IEKMTAISAST	11	41	389.868945148268	NaN	0	389.5350341796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_IEKM(Oxidation (M))TAISAST_	ENST00000403018.2_2_7:69364353-69755408:+|nuORF;ENST00000406775.6_2_7:69364353-70163597:+|nuORF	28.5767321226876	0.4380616241468488	5				NaN	NaN	0	NaN	2676	3196	5870
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5875	20.71	NaN	3316.3	30	0	477.67	0.106	+			30486	QAFALVSYIS	10	66	549.7927685868037	1097.5709842404074	2	549.792724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QAFALVSYIS_	ENST00000608012.1_1_7:5468569-5468947:+|nuORF	76.16968421966216	0.22691431239609447	5				NaN	NaN	0	NaN	2677	3196	5870
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5876	20.712	NaN	1546.8	30	0	160.29	0.037			+	11883	FTLTRRSRS	9	63	562.3217163085938	NaN	0	562.3217163085938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FTLTRRSRS_	REV__ENST00000469563.1_1_1:894013-894620:-|nuORF	40.77816245573522	0.2702456086868081	5				NaN	NaN	0	NaN	2678	3196	5870
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5877	20.713	NaN	2112.8	30	0	646.27	0.143			+	32054	QRVIVEREAK	10	41	614.3631287051641	1226.711704477128	2	614.36181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QRVIVEREAK_	REV__ENSG00000180777|ENST00000690538|ANKRD30B	16.006774744331256	0.7351120747673535	5				NaN	NaN	0	NaN	2679	3196	5870
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5891	20.744	NaN	4934.4	30	0	1099.3	0.214			+	3854	ATALVEVFP	9	54	473.76487660551055	945.5152002778211	2	473.76361083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATALVEVFP_	REV__ENSG00000078898|ENST00000170150|BPIFB2	63.30626980617807	0.18605348971131092	5				NaN	NaN	0	NaN	2690	3199	5890
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5892	20.748	NaN	5501.1	30	0	912.4	0.106	+			19757	KDWSKVVLAY	10	70	604.8366509505443	1207.6587489678884	2	604.8352661132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KDWSKVVLAY_	ENSG00000111669|ENST00000396705|TPI1;ENST00000482209.1_1_12:6978793-6979262:+|nuORF;nc|ENSG00000111669|P60174-3|TPI1;nc|ENSG00000111669|P60174-4|TPI1	55.08391021199286	0.41055145962533396	5				NaN	NaN	0	NaN	2691	3199	5890
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5893	20.75	NaN	1944.3	30	0	443.23	0.106	+			48585	VTQNGGLYK	9	58	490.2650984013416	978.5156438694833	2	490.263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTQNGGLYK_	ENSG00000100596|ENST00000216484|SPTLC2	82.7504851949679	0.08565546331141553	5				NaN	NaN	0	NaN	2692	3199	5890
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5894	20.752	NaN	2931.9	30	0	444.6	0.106	+			47671	VSDPSSPQYGK	11	61	582.7814420161925	1163.548331099185	2	582.7801513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSDPSSPQYGK_	ENSG00000166340|ENST00000299427|TPP1;ENST00000428886.6_1_11:6638445-6640631:-|nuORF;TPP1|p.I484Sfs*4|1|0.24|ENSG00000166340|chr11:6614968-6614968|C/-|frameshift_variant	79.07001860377117	0.16012584326255155	5				NaN	NaN	0	NaN	2693	3199	5890
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5895	20.753	NaN	4736.3	30	0	1240	0.106				-1	 	0	38	336.5349000586357	1006.582870776107	3	336.5342102050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2694	3199	5890
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5896	20.755	NaN	778.74	30	0	101.09	0.037	+			33176	REVAGHTEQL	10	35	570.2949711348922	1138.5753893365843	2	570.294189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_REVAGHTEQL_	CON__P08727;ENSG00000171345|ENST00000361566|KRT19;ENST00000468880.1_1_17:39680334-39681232:-|nuORF;ENST00000471565.2_1_17:39680334-39680852:-|nuORF	21.68575002086885	0.7027366847906487	5				NaN	NaN	0	NaN	2695	3199	5890
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5897	20.756	NaN	1499	30	0	640.96	0.14	+			31191	QGPSHVFVA	9	37	471.2442466143418	940.4739402954837	2	471.2432861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QGPSHVFVA_	ENST00000251473.9_1_19:11474847-11475128:+|nuORF	29.14955571784316	0.5308295550522326	5				NaN	NaN	0	NaN	2696	3199	5890
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5910	20.785	NaN	2252.4	30	0	536.78	0.214				-1	 	0	55	460.7644550285436	919.5143571238872	2	460.7633361816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2706	3202	5909
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5911	20.789	NaN	2653.1	30	0	203.38	0.106	+			31709	QNQQQIQQ	8	56	507.74860203841945	NaN	0	507.7481994628906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QNQQQIQQ_	ENSG00000099917|ENST00000263205|MED15;ENST00000492381.5_1_22:20909161-20940988:+|nuORF;nc|ENSG00000099917|Q96RN5-2|MED15;nc|ENSG00000099917|Q96RN5-3|MED15	60.29395666154354	1.7418937515398478	5				NaN	NaN	0	NaN	2707	3202	5909
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5912	20.791	NaN	3292.6	30	0	708.05	0.106			+	-1	ASMLVLRLA	9	41	330.53131280557795	988.5721090169338	3	330.53070068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_ASM(Oxidation (M))LVLRLA_	REV__ENSG00000132153|ENST00000445061|DHX30;REV__nc|ENSG00000132153|Q7L2E3-2|DHX30;REV__nc|ENSG00000132153|Q7L2E3-3|DHX30	20.94693142431847	0.6074874384046576	5				NaN	NaN	0	NaN	2708	3202	5909
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5913	20.793	NaN	19511	30	0	11038	0.106				-1	 	0	59	384.77298944621174	767.5314259592235	2	384.77215576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2709	3202	5909
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5914	20.795	NaN	4856.9	30	0	1270.8	0.106	+			15261	GTTGAVLGQK	10	60	466.26486935659483	930.5151857799897	2	466.2637023925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTTGAVLGQK_	ENSG00000198643|ENST00000358781|FAM3D;FAM3D|p.G139Vfs*16|1|0.28|ENSG00000198643|chr3:58637183-58637183|C/-|frameshift_variant	70.8162118820467	0.27065172005956	5				NaN	NaN	0	NaN	2710	3202	5909
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5915	20.796	NaN	2694.9	30	0	476.23	0.106	+			17259	HYKYILGL	8	53	503.7877414601479	NaN	0	503.78802490234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HYKYILGL_	ENST00000471640.1_1_2:183799522-183806825:-|nuORF	55.50420428727701	1.7418937515398478	5				NaN	NaN	0	NaN	2711	3202	5909
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5916	20.798	NaN	1446.8	30	0	339.51	0.035	+			46347	VEKPAETHL	9	52	512.2773222606412	1022.5400915880824	2	512.2772827148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VEKPAETHL_	ENSG00000198171|ENST00000354488|DDRGK1;nc|ENSG00000198171|Q96HY6-2|DDRGK1	44.377184641726394	0.36891676396732553	5				NaN	NaN	0	NaN	2712	3202	5909
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5934	20.836	NaN	4181.1	30	0	2123.8	0.213	+			29570	PFFSKEQPQAL	11	79	646.3394519627859	1290.6643509923717	2	646.3382568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PFFSKEQPQAL_	ENSG00000142606|ENST00000378412|MMEL1;nc|ENSG00000142606|Q495T6-3|MMEL1	61.76455937419982	0.30770400073182314	5				NaN	NaN	0	NaN	2727	3205	5933
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5935	20.839	NaN	2732.5	30	0	552.92	0.106	+			5352	ATVTPSPVK	9	54	450.2643934168518	898.5142339005037	2	450.2635498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATVTPSPVK_	ENSG00000069275|ENST00000367142|NUCKS1;nc|ENSG00000069275|Q9H1E3-2|NUCKS1	58.22992032128504	0.22837015374068087	5				NaN	NaN	0	NaN	2728	3205	5933
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5936	20.841	NaN	1565.9	30	0	146.11	0.106				-1	PCRRPQLP	8	38	341.8539123535156	NaN	0	341.8539123535156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_PC(Carbamidomethyl (C))RRPQLP_	ENST00000318109.11_1_22:24179098-24180623:-|nuORF	29.14955571784316	1.7418937515398478	5				NaN	NaN	0	NaN	2729	3205	5933
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5937	20.843	NaN	1475.6	30	0	425.7	0.106			+	-1	STVGGACMW	9	41	492.7002434194041	983.3859339056082	2	492.69927978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_STVGGAC(Carbamidomethyl (C))M(Oxidation (M))W_	REV__ENST00000381440.4_1_16:19126483-19126618:+|nuORF;REV__ITPRIPL2|p.G223Afs*56|1|0.45|ENSG00000205730|chr16:19115124-19115124|G/-|frameshift_variant	31.954861631926434	0.5046124803899898	5				NaN	NaN	0	NaN	2730	3205	5933
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5938	20.845	NaN	3495.7	30	0	292.65	0.106	+			36085	SEKDTKQIL	9	64	531.2964802917123	1060.5784076502246	2	531.2963256835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SEKDTKQIL_	ENSG00000183207|ENST00000595090|RUVBL2;ENST00000596247.5_1_19:49507512-49519096:+|nuORF;nc|ENSG00000183207|Q9Y230-2|RUVBL2	112.84542089569574	0.026094560706667817	5				NaN	NaN	0	NaN	2731	3205	5933
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5939	20.847	NaN	1111.6	30	0	231.9	0.106	+			6407	AVVHVVFA	8	43	421.2492046728147	840.4838564124294	2	421.2479248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AVVHVVFA_	CCR5|p.A133V|1|0.05|ENSG00000160791|chr3:46373300-46373300|C/T|missense_variant	43.626045697637714	0.6338121648150432	5				NaN	NaN	0	NaN	2732	3205	5933
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5940	20.849	NaN	2700.1	30	0	861.64	0.036	+			11495	FPCLWLGLL	9	40	354.5334377033394	1060.5784837102183	3	354.5328674316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FPCLWLGLL_	ENSG00000135678|ENST00000551568|CPM	29.14955571784316	0.5308295550522326	5				NaN	NaN	0	NaN	2733	3205	5933
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5958	20.886	NaN	5722.1	30	0	2639.6	0.214			+	29749	PHRPIVKQL	9	53	363.22952862773377	1086.6667564834013	3	363.2287902832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PHRPIVKQL_	REV__EBF1|p.T504Pfs*14|1|0.38|ENSG00000164330|chr5:158712194-158712194|G/-|frameshift_variant;REV__EBF4|p.E365Rfs*9|1|0.41|ENSG00000088881|chr20:2751770-2751770|C/-|frameshift_variant;REV__ENSG00000088881|ENST00000609451|EBF4;REV__ENSG00000108001|ENST00000440978|EBF3;REV__ENSG00000164330|ENST00000313708|EBF1;REV__ENSG00000221818|ENST00000520164|EBF2;REV__ENST00000518836.5_1_5:158126121-158526593:-|nuORF;REV__ENST00000519739.5_1_5:158126121-158523319:-|nuORF;REV__ENST00000519890.5_1_5:158126121-158500600:-|nuORF;REV__ENST00000522192.5_1_5:158126121-158523561:-|nuORF;REV__ENST00000609967.5_1_20:2674291-2732741:+|nuORF;REV__nc|ENSG00000088881|Q9BQW3-1|EBF4;REV__nc|ENSG00000108001|Q9H4W6-2|EBF3;REV__nc|ENSG00000108001|Q9H4W6|EBF3;REV__nc|ENSG00000164330|Q9UH73-2|EBF1;REV__nc|ENSG00000221818|Q9HAK2-2|EBF2	44.377184641726394	0.36891676396732553	5				NaN	NaN	0	NaN	2748	3208	5957
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5959	20.89	NaN	954.56	30	0	86.83	0.106			+	9844	EPRQGRVWSQ	10	52	621.8197631835938	NaN	0	621.8197631835938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EPRQGRVWSQ_	REV__ENSG00000166261|ENST00000530393|ZNF202	41.080066990542036	0.36199559365313844	5				NaN	NaN	0	NaN	2749	3208	5957
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5960	20.892	NaN	3019.4	30	0	310.96	0.106	+			20399	KETEIVKKL	9	68	544.3407825145356	1086.667012095871	2	544.3397827148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KETEIVKKL_	ENSG00000115816|ENST00000234170|CEBPZ	120.27252224102466	0.02103478360410217	5				NaN	NaN	0	NaN	2750	3208	5957
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5961	20.893	NaN	1047.5	30	0	87.781	0.106	+			2708	AQRSVVFLF	9	49	533.8047485351562	NaN	0	533.8047485351562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AQRSVVFLF_	ENST00000560992.1_1_15:41851455-41853662:+|nuORF	21.9598887501803	0.3626577482100488	5				NaN	NaN	0	NaN	2751	3208	5957
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5962	20.895	NaN	1422.1	30	0	334.78	0.106	+			39315	STATATVSVGK	11	50	511.2799379428244	1020.5453229524488	2	511.2796325683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STATATVSVGK_	ENSG00000261150|ENST00000615648|EPPK1;EPPK1|p.G2015Vfs*36|2|0.33|ENSG00000261150|chr8:143867210-143867210|C/-|frameshift_variant;EPPK1|p.Q829Rfs*8|1|0.05|ENSG00000261150|chr8:143870770-143870770|C/-|frameshift_variant;EPPK1|p.Y695Ifs*68|1|0.36|ENSG00000261150|chr8:143871171-143871172|-/T|frameshift_variant	56.55063890039881	0.3542454156878057	5				NaN	NaN	0	NaN	2752	3208	5957
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5963	20.897	NaN	2088	30	0	265.32	0.035	+			33716	RPGFPARAE	9	61	500.771843765869	999.529134598538	2	500.7713623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RPGFPARAE_	ENST00000587807.5_1_18:54293643-54306011:-|nuORF	45.97224482568171	0.3502073465782774	5				NaN	NaN	0	NaN	2753	3208	5957
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5964	20.898	NaN	1159.3	30	0	129.71	0.14				-1	ATCGQVLSR	9	46	496.2519836425781	NaN	0	496.2519836425781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_ATC(Carbamidomethyl (C))GQVLSR_	ENSG00000160961|ENST00000292530|ZNF333	40.05817265558897	0.275207446262312	5				NaN	NaN	0	NaN	2754	3208	5957
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5976	20.925	NaN	1725.9	30	0	879.74	0.214				-1	 	0	35	444.2462258779951	886.4778988227902	2	444.24456787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2763	3211	5975
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5977	20.928	NaN	1503.9	30	0	390.22	0.035				-1	QCGTLRFP	8	49	510.7489831779451	NaN	0	510.7483215332031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))QC(Carbamidomethyl (C))GTLRFP_	ENST00000521344.1_1_8:52762399-52762495:-|nuORF	33.51558372728122	1.7418937515398478	5				NaN	NaN	0	NaN	2764	3211	5975
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5986	20.949	NaN	8651.6	30	0	931.26	0.214	+			1182	AENKEIQKL	9	78	536.8043207850093	1071.5940886368185	2	536.8040161132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AENKEIQKL_	ENSG00000106541|ENST00000419304|AGR2	164.6633220568051	0.0036778626899430975	5				NaN	NaN	0	NaN	2770	3214	5985
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5987	20.952	NaN	6510	30	0	3165	0.106				-1	 	0	51	558.8173102569846	1115.620067580769	2	558.8173217773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2771	3214	5985
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5988	20.954	NaN	3595	30	0	411.42	0.106	+			40647	SVAQTVVQK	9	68	480.2792764320155	NaN	0	480.279052734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVAQTVVQK_	ENSG00000057294|ENST00000340811|PKP2;nc|ENSG00000057294|Q99959|PKP2	109.43880257439609	0.010203938004363878	5				NaN	NaN	0	NaN	2772	3214	5985
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	5989	20.956	NaN	2256.1	30	0	294.7	0.036			+	-1	QCPAPSKIY	9	58	532.266749420638	NaN	0	532.2132568359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_QC(Carbamidomethyl (C))PAPSKIY_	REV__ENSG00000198854|ENST00000368775|C1orf68	51.33545320467046	0.19748963086191895	5				NaN	NaN	0	NaN	2773	3214	5985
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6003	20.986	NaN	11299	30	0	1178	0.214	+			39360	STCNTKLTLK	10	84	583.316877168521	1164.619201403842	2	583.8176879882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_STC(Carbamidomethyl (C))NTKLTLK_	ENSG00000169756|ENST00000544547|LIMS1;ENSG00000256671|ENST00000632897|LIMS4;ENSG00000256977|ENST00000480744|LIMS3;nc|ENSG00000169756|P48059-3|LIMS1;nc|ENSG00000169756|P48059-4|LIMS1;nc|ENSG00000169756|P48059-5|LIMS1;nc|ENSG00000169756|P48059|LIMS1	65.15724298150197	0.31893571707528906	5				NaN	NaN	0	NaN	2784	3217	6002
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6004	20.989	NaN	3050.9	30	0	400.69	0.106				-1	ELCRPIRH	8	61	540.7901292879125	1079.5657056426248	2	540.7894287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_ELC(Carbamidomethyl (C))RPIRH_	CTBS|p.I336Pfs*5|1|0.06|ENSG00000117151|chr1:84555151-84555152|-/GTGGG|frameshift_variant;CTBS|p.T132Hfs*9|1|0.39|ENSG00000117151|chr1:84570062-84570062|T/-|frameshift_variant;ENSG00000117151|ENST00000370630|CTBS;ENST00000477677.5_1_1:85031687-85040098:-|nuORF	45.9519527083369	0.6193794311207887	5				NaN	NaN	0	NaN	2785	3217	6002
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6005	20.991	NaN	1691.2	30	0	266.61	0.106	+			31319	QINKDDVT	8	51	466.73847291565096	931.4623928981019	2	466.7372741699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QINKDDVT_	ENSG00000174780|ENST00000642900|SRP72;nc|ENSG00000174780|O76094-2|SRP72	30.503639358989545	0.7238069182250283	5				NaN	NaN	0	NaN	2786	3217	6002
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6006	20.993	NaN	2552.7	30	0	456.51	0.106			+	9331	EIIDRTTG	8	53	452.74036607537835	NaN	0	452.739990234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EIIDRTTG_	REV__tr|U7SZX8|U7SZX8_FUSNUtRNAmodificationGTPaseMnmEOS=FusobacteriumnucleatumCTI-5OX=1316586GN=mnmEPE=3SV=1	51.33545320467046	1.7418937515398478	5				NaN	NaN	0	NaN	2787	3217	6002
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6007	20.995	NaN	1186.6	30	0	78.603	0.106	+			27254	MERQSHDY	8	50	533.2245483398438	NaN	0	533.2245483398438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MERQSHDY_	ENSG00000100596|ENST00000216484|SPTLC2;ENST00000557566.1_1_14:78045296-78063654:-|nuORF	37.15910966729921	1.7418937515398478	5				NaN	NaN	0	NaN	2788	3217	6002
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6008	20.997	NaN	7292.1	30	0	861.72	0.037			+	27505	MMQILTKLC	9	77	569.2946595521961	1136.574766171192	2	569.2946166992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_MMQILTKLC(Carbamidomethyl (C))_	REV__ENST00000420695.1_1_1:153506119-153506353:+|nuORF	74.25504064058377	0.12238981753128622	5				NaN	NaN	0	NaN	2789	3217	6002
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6009	20.997	NaN	2867.8	30	0	1005.5	0.143			+	-1	MAPLPETLL	9	32	334.1833400957447	NaN	0	334.1832275390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_M(Oxidation (M))APLPETLL_	REV__ATG2A|p.G1473Afs*14|1|0.28|ENSG00000110046|chr11:64900540-64900540|C/-|frameshift_variant;REV__ATG2A|p.G1888Afs*2|2|0.3|ENSG00000110046|chr11:64895127-64895127|C/-|frameshift_variant;REV__ENSG00000110046|ENST00000377264|ATG2A;REV__nc|ENSG00000110046|Q2TAZ0-3|ATG2A	21.9598887501803	0.3626577482100488	5				NaN	NaN	0	NaN	2790	3217	6002
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6022	21.027	NaN	4389.7	30	0	291.62	0.214	+			17753	IEQGNTKAL	9	61	487.27050095571735	972.5264489782347	2	487.2690124511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IEQGNTKAL_	ENSG00000178896|ENST00000316052|EXOSC4	70.8162118820467	0.13725933411854815	5				NaN	NaN	0	NaN	2800	3220	6021
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6023	21.031	NaN	5345.4	30	0	895.16	0.106				-1	 	0	47	405.7461708183707	809.4777887035414	2	405.7452087402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2801	3220	6021
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6024	21.033	NaN	15002	30	0	1787.4	0.106				-1	 	0	75	492.26813931380013	982.5217256944003	2	492.2667236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2802	3220	6021
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6025	21.034	NaN	6280.2	30	0	1260.8	0.106			+	34718	RVVSSSMKK	9	67	511.2937339811582	1020.5729150291164	2	511.29302978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RVVSSSMKK_	REV__AKAP13|p.T2400Nfs*3|1|0.33|ENSG00000170776|chr15:85730617-85730618|-/C|frameshift_variant;REV__ENSG00000170776|ENST00000394518|AKAP13;REV__nc|ENSG00000170776|Q12802-2|AKAP13;REV__nc|ENSG00000170776|Q12802-4|AKAP13	62.107414245175825	0.1960472003779324	5				NaN	NaN	0	NaN	2803	3220	6021
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6026	21.036	NaN	2073.9	30	0	384.86	0.106	+			40410	STVGSAISR	9	49	439.2398064106672	NaN	0	439.23992919921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STVGSAISR_	ENSG00000101150|ENST00000346249|TPD52L2;nc|ENSG00000101150|O43399-2|TPD52L2;nc|ENSG00000101150|O43399-3|TPD52L2;nc|ENSG00000101150|O43399-4|TPD52L2;nc|ENSG00000101150|O43399-5|TPD52L2;nc|ENSG00000101150|O43399-6|TPD52L2;nc|ENSG00000101150|O43399-7|TPD52L2	109.47833844074708	0.010168233843482827	5				NaN	NaN	0	NaN	2804	3220	6021
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6027	21.038	NaN	2571.8	30	0	193.84	0.106	+			23492	LAGAHSSL	8	54	378.2066545734555	754.3987562137111	2	378.2057800292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LAGAHSSL_	ENSG00000105223|ENST00000409735|PLD3	44.53106598305862	0.628196326904373	5				NaN	NaN	0	NaN	2805	3220	6021
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6028	21.04	NaN	2112.3	30	0	267.43	0.036			+	18425	ISAVEPRTSL	10	51	358.2051624762069	1071.5936580288208	3	358.20428466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ISAVEPRTSL_	REV__ENSG00000132182|ENST00000254508|NUP210;REV__nc|ENSG00000132182|Q8TEM1-2|NUP210;REV__NUP210|p.L135Wfs*3|2|0.26|ENSG00000132182|chr3:13397390-13397390|G/-|frameshift_variant;REV__NUP210|p.Q1266Sfs*28|1|0.4|ENSG00000132182|chr3:13335502-13335502|C/-|frameshift_variant	38.753607047826485	0.5606299674732264	5				NaN	NaN	0	NaN	2806	3220	6021
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6043	21.072	NaN	38797	30	0	20042	0.214				-1	 	0	48	328.51438806664976	982.5213348001494	3	328.51373291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2818	3223	6042
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6044	21.075	NaN	7804.3	30	0	965.98	0.106				-1	 	0	55	420.2412648915553	838.4679768499107	2	420.24017333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2819	3223	6042
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6045	21.077	NaN	2386.3	30	0	383.24	0.106	+			2618	AQIENSAAVEK	11	64	580.3023091727348	1158.5900654122695	2	580.3013916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AQIENSAAVEK_	ENSG00000162645|ENST00000370466|GBP2	163.83861116171747	4.463896168574634E-05	5				NaN	NaN	0	NaN	2820	3223	6042
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6046	21.079	NaN	9384.5	30	0	3857.7	0.106				-1	IVVVCCVVG	9	48	316.50682301922336	NaN	0	316.5068359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_IVVVC(Carbamidomethyl (C))CVVG_	ENSG00000198799|ENST00000361127|LRIG2	37.15910966729921	0.2899585034171616	5				NaN	NaN	0	NaN	2821	3223	6042
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6047	21.081	NaN	12133	30	0	5531.6	0.106				-1	 	0	71	539.331249031462	1076.647945129724	2	539.33056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2822	3223	6042
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6048	21.083	NaN	2706.7	30	0	711.68	0.035	+			5198	ATTQTIMQK	9	60	511.27196622774363	1020.5293795222873	2	511.27093505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATTQTIMQK_	ENSG00000196584|ENST00000359321|XRCC2	70.8162118820467	0.13725933411854815	5				NaN	NaN	0	NaN	2823	3223	6042
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6049	21.083	NaN	11205	30	0	1867.7	0.144	+			10529	EWFTVLFH	8	59	360.18305142152894	NaN	0	359.8890380859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EWFTVLFH_	ENST00000406122.5_2_2:38523614-38525308:-|nuORF;ENST00000419554.6_1_2:38523614-38525308:-|nuORF	52.29916861842294	1.7418937515398478	5				NaN	NaN	0	NaN	2824	3223	6042
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6062	21.113	NaN	10547	30	0	1194	0.214	+			5332	ATVNMYRASG	10	75	535.2577689041466	1068.500984875093	2	535.2570190429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATVNMYRASG_	ENSG00000138002|ENST00000260570|IFT172;nc|ENSG00000138002|Q9UG01-2|IFT172	52.936696900407355	0.4300801048568001	5				NaN	NaN	0	NaN	2834	3226	6061
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6063	21.117	NaN	19812	30	0	5057.8	0.106				-1	GVEMEVTIAN	10	76	539.7575992057847	1077.5006454783693	2	539.7567138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_GVEM(Oxidation (M))EVTIAN_	ENST00000312184.5_1_8:74894595-74894706:+|nuORF	37.81151784470057	0.569310847604193	5				NaN	NaN	0	NaN	2835	3226	6061
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6064	21.119	NaN	2816.3	30	0	240.83	0.106	+			35552	SAVSQSKEL	9	61	474.7555851239795	947.496617314759	2	474.75390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAVSQSKEL_	ENSG00000136603|ENST00000259119|SKIL;ENST00000490894.1_1_3:170102333-170102591:+|nuORF;nc|ENSG00000136603|P12757-3|SKIL;nc|ENSG00000136603|P12757-5|SKIL	72.87924865735499	0.12833875048249987	5				NaN	NaN	0	NaN	2836	3226	6061
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6065	21.121	NaN	3339.1	30	0	1243.5	0.106				-1	TASCSFLQR	9	41	357.1741918496255	1068.5007461490766	3	357.17352294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_TASC(Carbamidomethyl (C))SFLQR_	ENST00000481551.5_1_7:92165699-92165855:+|nuORF	25.57405402267927	0.5642445186134241	5				NaN	NaN	0	NaN	2837	3226	6061
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6066	21.123	NaN	2414.3	30	0	443.65	0.106	+			13161	GGSRGGGG	8	57	604.2789655082903	603.2716890416903	1	604.2780151367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GGSRGGGG_	chr12:54282662-54282800|482|460.96|0.0|25.46|+|ENST00000677249|HNRNPA1,HNRNPA1;chr12:54282823-54283827|481|40.36|0.0|21.94|+|2|HNRNPA1,HNRNPA1|1;CON__P04264;ENSG00000135486|ENST00000340913|HNRNPA1;ENSG00000167768|ENST00000252244|KRT1;ENSG00000224578|ENST00000565308|HNRNPA1L3;ENST00000375750.7_1_6:31707746-31708989:+|nuORF;ENST00000425703.5_1_6:31707794-31708989:+|nuORF;ENST00000429216.1_1_2:201928351-201928714:+|nuORF;ENST00000456883.6_3_12:133405053-133405404:-|nuORF;KRT1|p.Y525H|1|0.33|ENSG00000167768|chr12:52675555-52675555|A/G|missense_variant;nc|ENSG00000135486|P09651-2|HNRNPA1;REV__ENST00000593920.5_1_19:58920498-58921395:+|nuORF;tr|U7STX4|U7STX4_FUSNUDUF2207domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01600PE=4SV=1	4.316272785109212	0.7769738875864834	5				NaN	NaN	0	NaN	2838	3226	6061
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6067	21.124	NaN	2363.5	30	0	731.59	0.106			+	51524	YVVGWGLGW	9	46	518.7651319944268	1035.5157110556536	2	518.7642211914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YVVGWGLGW_	REV__ENST00000314940.6_1_5:137088427-137088670:-|nuORF	39.021493756699265	0.43173687394350213	5				NaN	NaN	0	NaN	2839	3226	6061
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6068	21.126	NaN	3065.5	30	0	364.07	0.037	+			16838	HPDTGISSKAM	11	61	572.2778482289536	1142.5411435247072	2	572.2770385742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HPDTGISSKAM_	ENSG00000124635|ENST00000339812|H2BC11;ENSG00000146047|ENST00000274764|H2BC1;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000196890|ENST00000693095|H2BC26;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000436555.1_1_1:228651947-228652295:-|nuORF;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;nc|ENSG00000203814|Q5QNW6-2|H2BC18	90.60085204095205	0.09631492835457038	5				NaN	NaN	0	NaN	2840	3226	6061
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6085	21.161	NaN	3723.8	30	0	1970.3	0.214				-1	 	0	46	384.77298944621174	767.5314259592235	2	384.77215576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2854	3229	6084
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6086	21.165	NaN	3177.5	30	0	625.11	0.106			+	21559	KNYNFGYQ	8	53	517.23949058428	1032.46442823536	2	517.2391357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KNYNFGYQ_	REV__ENSG00000146453|ENST00000392167|PNLDC1;REV__nc|ENSG00000146453|Q8NA58|PNLDC1	33.51558372728122	0.7005509609380386	5				NaN	NaN	0	NaN	2855	3229	6084
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6087	21.167	NaN	4145.8	30	0	640.16	0.106	+			35807	SEAPGQRAL	9	63	464.74604277233595	927.4775326114719	2	464.74554443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEAPGQRAL_	ENSG00000114867|ENST00000346169|EIF4G1;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;ENST00000460829.5_1_3:184046782-184052693:+|nuORF;ENST00000478291.1_1_3:184049262-184049734:+|nuORF;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1	67.49366992349736	0.1516260258713357	5				NaN	NaN	0	NaN	2856	3229	6084
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6088	21.169	NaN	3822	30	0	2313.5	0.106				-1	 	0	43	457.7390273404608	913.4635017477216	2	457.73797607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2857	3229	6084
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6089	21.171	NaN	2915.2	30	0	1361.4	0.106			+	35541	SAVLNWAI	8	53	437.2442241472225	872.473895361245	2	437.2427673339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SAVLNWAI_	REV__ENSG00000054983|ENST00000261304|GALC;REV__GALC|p.T518Yfs*4|1|0.3|ENSG00000054983|chr14:87945671-87945672|-/A|frameshift_variant;REV__nc|ENSG00000054983|P54803-3|GALC;REV__nc|ENSG00000054983|P54803-4|GALC;REV__nc|ENSG00000054983|P54803-5|GALC	57.81127852772723	0.5234495074909924	5				NaN	NaN	0	NaN	2858	3229	6084
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6090	21.172	NaN	1366	30	0	208.69	0.036	+			1876	AILNNEKLAL	10	55	549.8306745495989	1097.6467961659978	2	549.8300170898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AILNNEKLAL_	ZDHHC11|p.V23A|1|0.43|ENSG00000188818|chr5:850535-850535|A/G|missense_variant	47.657333605630114	0.47858658696240314	5				NaN	NaN	0	NaN	2859	3229	6084
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6091	21.173	NaN	4613	30	0	876.8	0.143				-1	 	0	51	336.53491762872176	1006.5829234863653	3	336.5341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2860	3229	6084
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6107	21.208	NaN	38568	30	0	10987	0.214				-1	 	0	68	458.75954573600626	915.5045385388125	2	458.75836181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2873	3232	6106
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6108	21.212	NaN	2340.8	30	0	1232.8	0.106			+	28674	NLVAGRLAE	9	42	471.77163534727435	NaN	0	471.7716064453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NLVAGRLAE_	REV__ENSG00000187147|ENST00000361799|RNF220;REV__ENST00000474064.5_1_1:45098020-45115698:+|nuORF;REV__ENST00000475378.5_1_1:45097966-45116444:+|nuORF;REV__ENST00000480686.5_1_1:45110332-45115698:+|nuORF;REV__nc|ENSG00000187147|Q5VTB9-3|RNF220	24.20275056022122	0.35506675290109213	5				NaN	NaN	0	NaN	2874	3232	6106
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6109	21.214	NaN	1782.1	30	0	233.5	0.106	+			48654	VTSQVSNLK	9	55	488.2769677824187	NaN	0	488.2771301269531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTSQVSNLK_	ENSG00000132952|ENST00000255304|USPL1;nc|ENSG00000132952|Q5W0Q7-2|USPL1	74.1650062923329	0.09137789763820878	5				NaN	NaN	0	NaN	2875	3232	6106
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6110	21.215	NaN	3379	30	0	567.99	0.106	+			27774	MRPCAFRL	8	58	505.25793707592095	1008.5013212186419	2	505.2570495605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_M(Oxidation (M))RPCAFRL_	ENST00000381410.4_1_5:53839710-53839797:+|nuORF	42.47446043378293	0.6409579893742323	5				NaN	NaN	0	NaN	2876	3232	6106
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6111	21.217	NaN	1271.1	30	0	248.15	0.106	+			28492	NGPVSHSSL	9	41	449.2244567871094	NaN	0	449.2244567871094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NGPVSHSSL_	ENSG00000122482|ENST00000337393|ZNF644;nc|ENSG00000122482|Q9H582-2|ZNF644;ZNF644|p.K1068Lfs*15|1|0.05|ENSG00000122482|chr1:90937971-90937972|-/GTAG|frameshift_variant;ZNF644|p.K193Nfs*16|1|0.42|ENSG00000122482|chr1:90940775-90940775|T/-|frameshift_variant	21.9598887501803	0.3626577482100488	5				NaN	NaN	0	NaN	2877	3232	6106
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6112	21.219	NaN	970.92	30	0	189.71	0.035				-1	SMNLHVRK	8	40	500.771843765869	999.529134598538	2	500.7657775878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_SM(Oxidation (M))NLHVRK_	ENST00000563480.6_2_15:66782707-66786755:-|nuORF;ENST00000565387.2_1_15:66782707-66784420:-|nuORF	30.503639358989545	0.7238069182250283	5				NaN	NaN	0	NaN	2878	3232	6106
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6113	21.22	NaN	1068.3	30	0	89.023	0.14			+	17929	IGKVDACNKL	10	55	530.7959594726562	NaN	0	530.7959594726562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IGKVDACNKL_	REV__ENSG00000171053|ENST00000305738|PATE1;REV__nc|ENSG00000171053|Q8WXA2-2|PATE1	50.033510581677724	0.305390621352984	5				NaN	NaN	0	NaN	2879	3232	6106
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6129	21.255	NaN	6107.7	30	0	916.12	0.214				-1	 	0	68	513.783540683605	1025.55252843401	2	513.7830200195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2892	3235	6128
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6130	21.258	NaN	1625.2	30	0	167.59	0.106	+			33611	RLRPPTACAP	10	55	541.2992129176829	1080.5838729021657	2	541.298095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RLRPPTACAP_	MNX1|p.P18Hfs*204|1|0.21|ENSG00000130675|chr7:157010298-157010298|G/-|frameshift_variant	26.063383197487333	0.6669871633831898	5				NaN	NaN	0	NaN	2893	3235	6128
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6131	21.26	NaN	2495.9	30	0	226.17	0.106	+			39625	STICKYYQK	9	70	595.7982668249545	1189.5819807167088	2	595.7975463867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_STIC(Carbamidomethyl (C))KYYQK_	ENSG00000075975|ENST00000170447|MKRN2	52.936696900407355	0.27249468807391813	5				NaN	NaN	0	NaN	2894	3235	6128
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6132	21.262	NaN	1637.5	30	0	118.07	0.106			+	-1	CAHVKILVQ	9	47	356.5386642927306	1066.5941634783917	3	356.87225341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_C(Carbamidomethyl (C))AHVKILVQ_	REV__ENSG00000116791|ENST00000340866|CRYZ;REV__nc|ENSG00000116791|Q08257-3|CRYZ	31.529811441608018	0.5085848003137583	5				NaN	NaN	0	NaN	2895	3235	6128
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6133	21.264	NaN	4002.3	30	0	602.75	0.106				-1	 	0	68	575.7917050617037	1149.5688571902074	2	575.791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2896	3235	6128
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6134	21.266	NaN	2383.2	30	0	516.7	0.035			+	26624	LVAHLPATSV	10	58	504.29701696420875	1006.5794809952175	2	504.2964782714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LVAHLPATSV_	REV__nc|ENSG00000258366|Q9NZ71-2|RTEL1	38.80614096846853	0.5601458937078225	5				NaN	NaN	0	NaN	2897	3235	6128
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6135	21.266	NaN	1529.7	30	0	231.6	0.144				-1	QVLGDLSMIL	10	36	368.87053384836804	1103.589772145304	3	368.8697204589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_QVLGDLSM(Oxidation (M))IL_	ENSG00000188986|ENST00000343053|NELFB;nc|ENSG00000188986|Q8WX92|NELFB	29.170058357718403	0.6416167986984785	5				NaN	NaN	0	NaN	2898	3235	6128
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6153	21.305	NaN	1668.7	30	0	233.55	0.214			+	26257	LSSTPSHLF	9	51	494.7585754394531	NaN	0	494.7585754394531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSSTPSHLF_	REV__ENST00000506043.1_1_X:77218054-77218261:+|nuORF	45.9519527083369	0.2345902329052062	5				NaN	NaN	0	NaN	2913	3238	6152
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6154	21.308	NaN	2426.8	30	0	569.98	0.106			+	47600	VRSGISGP	8	45	386.7193908691406	NaN	0	386.7193908691406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VRSGISGP_	REV__ENST00000531040.5_1_11:67183149-67186290:+|nuORF	24.20275056022122	1.7418937515398478	5				NaN	NaN	0	NaN	2914	3238	6152
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6155	21.31	NaN	2630.5	30	0	428.2	0.106	+			23021	KVSQVIMEK	9	58	531.3055762270538	1060.5965995209076	2	531.3050537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KVSQVIMEK_	ENSG00000164985|ENST00000380733|PSIP1	56.632244143249146	0.24168844994051353	5				NaN	NaN	0	NaN	2915	3238	6152
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6156	21.312	NaN	975.55	30	0	138.26	0.106				-1	RSASRKHM	8	30	330.1748046875	NaN	0	330.1748046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_RSASRKHM(Oxidation (M))_	FLG|p.T2193Hfs*226|1|0.45|ENSG00000143631|chr1:152308309-152308309|T/-|frameshift_variant	16.473147378115264	1.7418937515398478	5				NaN	NaN	0	NaN	2916	3238	6152
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6157	21.314	NaN	1321.5	30	0	141.05	0.106	+			40570	SVAECQLMK	9	61	541.2549850790426	NaN	0	541.2546997070312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C),Oxidation (M)	_SVAEC(Carbamidomethyl (C))QLM(Oxidation (M))K_	ENSG00000105221|ENST00000392038|AKT2;ENST00000391844.8_1_19:40739781-40791100:-|nuORF;ENST00000537834.5_1_19:40745726-40771198:-|nuORF;nc|ENSG00000105221|P31751-2|AKT2	60.11826168202944	0.14881452885248947	5				NaN	NaN	0	NaN	2917	3238	6152
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6158	21.316	NaN	1534.6	30	0	133.33	0.039	+			34055	RSMEAHNILSK	11	55	643.3373844408674	NaN	0	643.3369750976562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RSMEAHNILSK_	ENSG00000160075|ENST00000291386|SSU72;ENST00000378725.3_1_1:1480120-1509937:-|nuORF;nc|ENSG00000160075|Q9NP77-2|SSU72;SSU72|p.L82Ffs*8|1|0.34|ENSG00000160075|chr1:1544981-1544982|-/A|frameshift_variant	72.7309140781514	0.11772054653510468	5				NaN	NaN	0	NaN	2918	3238	6152
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6159	21.316	NaN	1309.9	30	0	185.38	0.142	+			40830	SVEITGVSH	9	52	464.7416687011719	NaN	0	464.7416687011719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVEITGVSH_	AluSp_dup17164|chr6:42889159-42889460:+|1.1128196386926228|0.1877517114460719|2.57|474.0|13|1|anti-sense	37.15910966729921	0.2899585034171616	5				NaN	NaN	0	NaN	2919	3238	6152
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6174	21.351	NaN	9931.8	30	0	1780.9	0.214	+			23870	LDFADPQGSTI	11	65	582.2819706990953	1162.5493884649904	2	582.2808837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LDFADPQGSTI_	ENSG00000178522|ENST00000322937|AMBN;nc|ENSG00000178522|Q9NP70-2|AMBN	63.53385203322761	0.2919106290768168	5				NaN	NaN	0	NaN	2931	3241	6173
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6175	21.354	NaN	4614	30	0	1551.8	0.106			+	44452	TSNIIAKAG	9	54	437.754353784271	873.494154635342	2	437.75323486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TSNIIAKAG_	REV__ENSG00000051128|ENST00000392351|HOMER3;REV__nc|ENSG00000051128|Q9NSC5-2|HOMER3;REV__nc|ENSG00000051128|Q9NSC5-3|HOMER3;REV__nc|ENSG00000051128|Q9NSC5-4|HOMER3;REV__nc|ENSG00000051128|Q9NSC5-5|HOMER3	71.29570347882199	0.13518600952103718	5				NaN	NaN	0	NaN	2932	3241	6173
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6176	21.356	NaN	4295	30	0	679.01	0.106	+			18120	ILELFPKL	8	56	486.80928771552357	971.6040224978472	2	486.8081970214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ILELFPKL_	ENSG00000147206|ENST00000395065|NXF3;NXF3|p.S504Rfs*7|1|0.21|ENSG00000147206|chrX:103077686-103077687|-/AT|frameshift_variant	94.00642277110589	0.2653416297186628	5				NaN	NaN	0	NaN	2933	3241	6173
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6177	21.358	NaN	1751.9	30	0	265.07	0.106	+			38171	SQCDSPYVTK	10	48	592.7676081222036	1183.520663311207	2	592.76611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_SQC(Carbamidomethyl (C))DSPYVTK_	ENSG00000102572|ENST00000539966|STK24;ENST00000481288.1_1_13:99161185-99171658:-|nuORF;nc|ENSG00000102572|Q9Y6E0|STK24	55.721020083383095	0.4047570224426313	5				NaN	NaN	0	NaN	2934	3241	6173
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6178	21.36	NaN	1330.9	30	0	151.04	0.106	+			45264	TVQGKVFER	9	49	532.2989501953125	NaN	0	532.2989501953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TVQGKVFER_	ENSG00000090382|ENST00000261267|LYZ	41.42661286455405	0.26577678759562784	5				NaN	NaN	0	NaN	2935	3241	6173
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6179	21.362	NaN	2409.9	30	0	573.82	0.036	+			28568	NKFVKCKK	8	50	526.3067404684762	1050.5989280037522	2	526.3062133789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_NKFVKC(Carbamidomethyl (C))KK_	ENSG00000204176|ENST00000374321|SYT15;ENSG00000277758|ENST00000615923|SYT15B;nc|ENSG00000204176|Q9BQS2-2|SYT15;nc|ENSG00000204176|Q9BQS2-3|SYT15;nc|ENSG00000277758|X6R8R1|SYT15B	42.47446043378293	0.6409579893742323	5				NaN	NaN	0	NaN	2936	3241	6173
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6180	21.362	NaN	3648.2	30	0	401.34	0.145	+			16250	HEEKVFRAV	9	46	372.20503182526636	NaN	0	372.2049255371094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HEEKVFRAV_	ENSG00000095139|ENST00000264028|ARCN1;nc|ENSG00000095139|P48444-2|ARCN1	54.722347961057174	0.17414871455573902	5				NaN	NaN	0	NaN	2937	3241	6173
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6197	21.399	NaN	14084	30	0	3061.2	0.213	+			29051	NTFLSTEYIK	10	78	608.3158124657394	1214.6170719982788	2	608.3145751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NTFLSTEYIK_	tr|U7SMD1|U7SMD1_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01959PE=4SV=1	66.9202029811203	0.3029018092171124	5				NaN	NaN	0	NaN	2951	3244	6196
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6198	21.403	NaN	42117	30	0	8826.1	0.106	+			48413	VTIKEGSQLK	10	94	551.8278183594433	1101.6410837856865	2	551.8272705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTIKEGSQLK_	ENSG00000100138|ENST00000401959|SNU13	188.9123650225555	0.0003434289860817577	5				NaN	NaN	0	NaN	2952	3244	6196
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6199	21.405	NaN	2090.3	30	0	204.78	0.106	+			37483	SLKPLQSQL	9	53	507.3034362792969	NaN	0	507.3034362792969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLKPLQSQL_	CHIT1|p.A442Gfs*36|1|0.51|ENSG00000133063|chr1:203216965-203216965|G/-|frameshift_variant	93.1432384553994	0.0352600271724948	5				NaN	NaN	0	NaN	2953	3244	6196
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6200	21.407	NaN	1579.9	30	0	203.37	0.106	+			3665	ASYMGKENLK	10	54	570.7901488733701	NaN	0	570.7901000976562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASYMGKENLK_	ENSG00000054654|ENST00000555002|SYNE2;ENST00000557005.1_1_14:64469755-64489638:+|nuORF;nc|ENSG00000054654|Q8WXH0|SYNE2;SYNE2|p.A5240Qfs*5|1|0.07|ENSG00000054654|chr14:64152639-64152639|G/-|frameshift_variant;SYNE2|p.D3074Ffs*8|1|0.07|ENSG00000054654|chr14:64053132-64053133|-/TTTCTTTTTCAAATACTTG|frameshift_variant;SYNE2|p.F2563Ifs*28|1|0.34|ENSG00000054654|chr14:64051593-64051594|-/A|frameshift_variant;SYNE2|p.F2840Lfs*3|1|0.38|ENSG00000054654|chr14:64052427-64052427|T/-|frameshift_variant;SYNE2|p.F4992Lfs*13|1|0.39|ENSG00000054654|chr14:64140067-64140067|T/-|frameshift_variant;SYNE2|p.L5308Ifs*18|1|0.12|ENSG00000054654|chr14:64158750-64158751|GG/-|frameshift_variant;SYNE2|p.M1669Wfs*6|1|0.36|ENSG00000054654|chr14:64017707-64017707|A/-|frameshift_variant;SYNE2|p.N1656Mfs*19|1|0.18|ENSG00000054654|chr14:64017669-64017669|A/-|frameshift_variant;SYNE2|p.S1830Kfs*9|1|0.34|ENSG00000054654|chr14:64021985-64021986|-/A|frameshift_variant;SYNE2|p.S6651Rfs*83|1|0.29|ENSG00000054654|chr14:64220596-64220597|-/G|frameshift_variant	50.033510581677724	0.305390621352984	5				NaN	NaN	0	NaN	2954	3244	6196
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6201	21.409	NaN	3032.5	30	0	1350.7	0.106			+	43099	TEPTAGLR	8	46	422.72962712535843	NaN	0	422.7295837402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TEPTAGLR_	REV__ENSG00000160392|ENST00000683109|C19orf47;REV__ENST00000582734.1_1_19:40827791-40830098:-|nuORF;REV__nc|nan|Q8N9M1-2|C19orf47;REV__nc|nan|Q8N9M1-3|C19orf47;REV__nc|nan|Q8N9M1|C19orf47	31.954861631926434	1.7418937515398478	5				NaN	NaN	0	NaN	2955	3244	6196
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6202	21.41	NaN	2178.8	30	0	701.06	0.032	+			6543	AYGKSPSL	8	43	411.72139293164446	NaN	0	411.7215270996094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AYGKSPSL_	ENSG00000133067|ENST00000367278|LGR6;ENST00000487787.5_1_1:202275897-202288332:+|nuORF;nc|ENSG00000133067|Q9HBX8-1|LGR6;nc|ENSG00000133067|Q9HBX8-2|LGR6	51.33545320467046	1.7418937515398478	5				NaN	NaN	0	NaN	2956	3244	6196
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6203	21.411	NaN	3626.6	30	0	1408.1	0.137	+			1981	AKAIGYAT	8	41	397.7247238080349	793.4348946828699	2	397.723876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AKAIGYAT_	ENSG00000275395|ENST00000616721|FCGBP;FCGBP-ACSS2|1|fusion;nc|ENSG00000275395|Q9Y6R7|FCGBP	79.45101966838831	0.3281480470254892	5				NaN	NaN	0	NaN	2957	3244	6196
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6217	21.442	NaN	17271	30	0	3351.1	0.214			+	25081	LLLYLLSQ	8	74	481.79882639761433	961.5830998620287	2	481.79730224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LLLYLLSQ_	REV__ENSG00000155755|ENST00000409883|TMEM237;REV__nc|ENSG00000155755|Q96Q45-2|TMEM237;REV__nc|ENSG00000155755|Q96Q45-3|TMEM237;REV__nc|ENSG00000155755|Q96Q45-4|TMEM237;REV__nc|ENSG00000155755|Q96Q45-5|TMEM237	55.50420428727701	0.5462892107279674	5				NaN	NaN	0	NaN	2968	3247	6216
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6218	21.445	NaN	6471.5	30	0	784.92	0.106	+			15910	HAANQSYQY	9	65	541.2390270731547	NaN	0	541.23876953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HAANQSYQY_	ENSG00000130402|ENST00000252699|ACTN4;ENST00000588618.5_1_19:39138385-39212431:+|nuORF;nc|ENSG00000130402|O43707-2|ACTN4;nc|ENSG00000130402|O43707-3|ACTN4	72.87924865735499	0.09578366712754152	5				NaN	NaN	0	NaN	2969	3247	6216
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6219	21.447	NaN	2072.8	30	0	204.94	0.106	+			12613	GEIDGNKV	8	42	416.21485637560136	830.4151598180027	2	416.2138977050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEIDGNKV_	ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232319904-232323320:-|nuORF	60.97194046774394	0.49215940876911696	5				NaN	NaN	0	NaN	2970	3247	6216
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6220	21.449	NaN	2194.9	30	0	1067.2	0.106				-1	 	0	40	406.2257406871015	810.436928441003	2	406.2245178222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	2971	3247	6216
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6221	21.451	NaN	1463.3	30	0	126.27	0.106			+	9173	EGPQADEGPS	10	59	493.70709773253054	NaN	0	493.28717041015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EGPQADEGPS_	REV__ENSG00000174516|ENST00000320740|PELI3;REV__nc|ENSG00000174516|Q8N2H9-2|PELI3;REV__nc|ENSG00000174516|Q8N2H9-3|PELI3;REV__nc|ENSG00000174516|Q8N2H9-4|PELI3	37.81151784470057	0.3760215235790741	5				NaN	NaN	0	NaN	2972	3247	6216
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6222	21.453	NaN	2142	30	0	1107.2	0.041			+	-1	RCCLWHGSLYA	11	41	711.8234925734832	1421.6324322137664	2	711.8209228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Carbamidomethyl (C)	_RC(Carbamidomethyl (C))C(Carbamidomethyl (C))LWHGSLYA_	REV__ENSG00000185989|ENST00000334062|RASA3;REV__nc|ENSG00000185989|Q14644-2|RASA3	26.69291269510374	0.70980431218767	5				NaN	NaN	0	NaN	2973	3247	6216
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6223	21.453	NaN	1904.3	30	0	216.35	0.144	+			20064	KEKEPEEEL	9	58	565.7833327399838	1129.5521125467676	2	565.7822875976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KEKEPEEEL_	ENSG00000149781|ENST00000345728|FERMT3;FERMT3|p.R510Pfs*105|1|0.28|ENSG00000149781|chr11:64220634-64220635|-/C|frameshift_variant;nc|ENSG00000149781|Q86UX7|FERMT3	54.722347961057174	0.257609425301511	5				NaN	NaN	0	NaN	2974	3247	6216
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6241	21.493	NaN	3428.1	30	0	564.99	0.214	+			37754	SLVDFSTNNQ	10	57	562.765411425099	1123.516269916998	2	562.7647705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLVDFSTNNQ_	ENSG00000132382|ENST00000254718|MYBBP1A;ENST00000573175.1_1_17:4451225-4453465:-|nuORF;nc|ENSG00000132382|Q9BQG0-2|MYBBP1A	62.107414245175825	0.3466735403679669	5				NaN	NaN	0	NaN	2989	3250	6240
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6242	21.496	NaN	1365.2	30	0	127.89	0.106	+			21989	KSFDEQNVPK	10	57	596.305008510561	1190.595464087922	2	596.3032836914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KSFDEQNVPK_	ENSG00000197321|ENST00000355867|SVIL;nc|ENSG00000197321|O95425-2|SVIL;nc|ENSG00000197321|O95425-3|SVIL;nc|ENSG00000197321|O95425-4|SVIL;SVIL|p.M1863Dfs*18|1|0.28|ENSG00000197321|chr10:29471186-29471187|-/C|frameshift_variant;SVIL|p.M1863Wfs*44|8|0.39|ENSG00000197321|chr10:29471187-29471187|C/-|frameshift_variant;SVIL|p.N2095Kfs*36|1|0.25|ENSG00000197321|chr10:29462394-29462395|-/T|frameshift_variant	51.52775601994872	0.4429225830406686	5				NaN	NaN	0	NaN	2990	3250	6240
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6243	21.498	NaN	2886.4	30	0	371.94	0.106	+			29056	NTGRLAGCTV	10	58	496.2529742244824	990.4913955157648	2	496.2514953613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NTGRLAGCTV_	ENSG00000119471|ENST00000398805|HSDL2;nc|ENSG00000119471|Q6YN16-2|HSDL2	45.97224482568171	0.49411383603842696	5				NaN	NaN	0	NaN	2991	3250	6240
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6244	21.5	NaN	1240.1	30	0	158.2	0.106	+			18044	IIQAKTRSL	9	54	515.3240966796875	NaN	0	515.3240966796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IIQAKTRSL_	ENSG00000197892|ENST00000524189|KIF13B;KIF13B|p.K1288Rfs*13|1|0.34|ENSG00000197892|chr8:29113530-29113530|T/-|frameshift_variant	54.776311868738084	0.17377682019723872	5				NaN	NaN	0	NaN	2992	3250	6240
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6245	21.502	NaN	3496.6	30	0	2115.9	0.106				-1	SAALRCHAG	9	44	471.7314817155077	941.4484104978154	2	471.7298889160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_SAALRC(Carbamidomethyl (C))HAG_	ENSG00000141665|ENST00000419743|FBXO15;FBXO15|p.F416Lfs*5|1|0.26|ENSG00000141665|chr18:74081942-74081942|A/-|frameshift_variant;FBXO15|p.K232Nfs*5|1|0.18|ENSG00000141665|chr18:74129494-74129494|T/-|frameshift_variant	31.954861631926434	0.5046124803899898	5				NaN	NaN	0	NaN	2993	3250	6240
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6246	21.504	NaN	1479.6	30	0	258.81	0.035	+			12161	GAKTLEATLN	10	50	509.2836583388945	1016.552763744589	2	509.28228759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GAKTLEATLN_	tr|U7SZL5|U7SZL5_FUSNUUrocanatereductaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00788PE=3SV=1	45.02220120713402	0.5028680121232791	5				NaN	NaN	0	NaN	2994	3250	6240
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6247	21.504	NaN	7067.3	30	0	1729.8	0.141	+			21184	KLARHSTGLQ	10	65	555.8225868572466	1109.6306207812931	2	555.8204956054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KLARHSTGLQ_	ENSG00000158445|ENST00000371741|KCNB1;ENSG00000182674|ENST00000523207|KCNB2;KCNB1|p.V402Lfs*6|1|0.32|ENSG00000158445|chr20:49374356-49374357|-/TCCTGCAA|frameshift_variant	53.08895987439943	0.42869529153390606	5				NaN	NaN	0	NaN	2995	3250	6240
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6261	21.536	NaN	3669.3	30	0	410.81	0.215	+			25266	LNNKEKKTM	9	68	553.3067856952508	1104.5990184573016	2	553.3065185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LNNKEKKTM_	tr|U7SYR4|U7SYR4_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00904PE=4SV=1	31.634271133179894	0.507608568980346	5				NaN	NaN	0	NaN	3006	3253	6260
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6262	21.539	NaN	9039.9	30	0	817.92	0.106	+			972	AEKAVTKEEF	10	87	576.3023383325476	1150.5901237318951	2	576.301025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEKAVTKEEF_	ENSG00000168028|ENST00000301821|RPSA;ENST00000478027.2_1_3:39450050-39453856:+|nuORF;nc|ENSG00000288920|A0A8I5KQE6|RPSA2	115.23196543181992	0.034063879665207575	5				NaN	NaN	0	NaN	3007	3253	6260
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6263	21.541	NaN	1877.6	30	0	806.69	0.106				-1	 	0	36	323.20231563271284	644.3900783322257	2	323.2016296386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3008	3253	6260
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6264	21.543	NaN	2695.4	30	0	622.57	0.106				-1	 	0	34	336.53491762872176	1006.5829234863653	3	336.5343933105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3009	3253	6260
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6265	21.545	NaN	1618.5	30	0	273.75	0.106	+			2260	ALVLWGPGA	9	52	442.2547291978891	882.4949054625782	2	442.2535400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ALVLWGPGA_	ENSG00000122376|ENST00000298786|SHLD2;ENST00000497389.6_1_10:46918355-46938364:+|nuORF;nc|ENSG00000122376|Q86V20|SHLD2	49.21078951299608	0.3122205139198386	5				NaN	NaN	0	NaN	3010	3253	6260
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6266	21.547	NaN	2870.7	30	0	1201.8	0.032				-1	 	0	52	384.77298944621174	767.5314259592235	2	384.7724914550781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3011	3253	6260
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6267	21.547	NaN	3061.3	30	0	409.35	0.139	+			16773	HNNIKLLE	8	71	490.781432087831	979.548311242462	2	490.7799987792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HNNIKLLE_	ITPR2|p.R603I|1|0.26|ENSG00000123104|chr12:26659191-26659191|C/A|missense_variant	31.954861631926434	0.7126016770032289	5				NaN	NaN	0	NaN	3012	3253	6260
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6282	21.58	NaN	2126	30	0	281.7	0.214			+	19268	KAFGLAQRVK	10	56	559.347096172119	1116.679639411038	2	559.346923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAFGLAQRVK_	REV__ENSG00000103740|ENST00000258873|ACSBG1	40.77816245573522	0.5419747034533848	5				NaN	NaN	0	NaN	3024	3256	6281
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6283	21.583	NaN	1804.5	30	0	399.89	0.106			+	15848	GWSDLGGRR	9	54	502.25754993479785	1002.5005469363957	2	502.25665283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GWSDLGGRR_	REV__ENST00000429642.1_3_10:1094327-1094705:-|nuORF	49.44154591367651	0.3095138337212152	5				NaN	NaN	0	NaN	3025	3256	6281
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6284	21.585	NaN	2279.1	30	0	349.42	0.106	+			24979	LLDGRDAP	8	51	428.7299499511719	NaN	0	428.7299499511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LLDGRDAP_	ENST00000318967.6_2_1:153746890-153747085:+|nuORF	63.30626980617807	1.7418937515398478	5				NaN	NaN	0	NaN	3026	3256	6281
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6285	21.587	NaN	1627.9	30	0	136.29	0.106	+			41499	SVPHFIKIE	9	54	535.3047684290358	NaN	0	535.3057861328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVPHFIKIE_	tr|U7T545|U7T545_FUSNUDUF262domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00305PE=4SV=1	31.529811441608018	0.3183796599642538	5				NaN	NaN	0	NaN	3027	3256	6281
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6286	21.589	NaN	4416.1	30	0	1143.7	0.036	+			49240	VVNKVPLTGK	10	48	352.2255026078558	NaN	0	352.22564697265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVNKVPLTGK_	ENSG00000151135|ENST00000280756|TMEM263	29.170058357718403	0.40439580130713204	5				NaN	NaN	0	NaN	3028	3256	6281
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6297	21.613	NaN	4443	30	0	857.62	0.214	+			36883	SIGNLTQLQ	9	62	487.2706145567831	972.5266761803662	2	487.26953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIGNLTQLQ_	ENSG00000148356|ENST00000300417|LRSAM1;nc|ENSG00000148356|Q6UWE0-2|LRSAM1	79.71258880314673	0.09879134589249085	5				NaN	NaN	0	NaN	3036	3259	6296
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6298	21.616	NaN	10305	30	0	3232	0.106	+			38199	SQFLAPKAMKK	11	68	416.9100955378361	1247.7084572137085	3	416.9091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SQFLAPKAMKK_	ENSG00000214530|ENST00000334805|STARD10;ENST00000535075.1_1_11:72465944-72466832:-|nuORF;ENST00000543089.1_1_11:72465944-72468974:-|nuORF	55.721020083383095	0.36165090524447163	5				NaN	NaN	0	NaN	3037	3259	6296
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6299	21.618	NaN	1285.3	30	0	176.08	0.035				-1	CSGVTGAMNVA	11	50	513.2231611392432	1024.4317693452863	2	513.2224731445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_CSGVTGAM(Oxidation (M))NVA_	ENSG00000167676|ENST00000301286|PLIN4;ENSG00000167676|ENST00000301286|PLIN4;ENSG00000167676|ENST00000301286|PLIN4;PLIN4|p.A561Qfs*13|1|0.1|ENSG00000167676|chr19:4512237-4512237|C/-|frameshift_variant;PLIN4|p.A561Qfs*13|1|0.1|ENSG00000167676|chr19:4512237-4512237|C/-|frameshift_variant;PLIN4|p.A561Qfs*13|1|0.1|ENSG00000167676|chr19:4512237-4512237|C/-|frameshift_variant;PLIN4|p.G1001Afs*9|1|0.16|ENSG00000167676|chr19:4510916-4510916|C/-|frameshift_variant;PLIN4|p.G1001Afs*9|1|0.16|ENSG00000167676|chr19:4510916-4510916|C/-|frameshift_variant;PLIN4|p.G1001Afs*9|1|0.16|ENSG00000167676|chr19:4510916-4510916|C/-|frameshift_variant;PLIN4|p.G374Afs*35|1|0.53|ENSG00000167676|chr19:4512797-4512797|C/-|frameshift_variant;PLIN4|p.G374Afs*35|1|0.53|ENSG00000167676|chr19:4512797-4512797|C/-|frameshift_variant;PLIN4|p.G374Afs*35|1|0.53|ENSG00000167676|chr19:4512797-4512797|C/-|frameshift_variant	29.170058357718403	0.683821074385409	5				NaN	NaN	0	NaN	3038	3259	6296
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6306	21.634	NaN	3102.6	30	0	309.2	0.214	+			8906	EEVAQQKSL	9	63	516.273240255225	1030.53192757725	2	516.2727661132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EEVAQQKSL_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	120.8684288430529	0.02067403653475984	5				NaN	NaN	0	NaN	3042	3262	6305
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6307	21.638	NaN	1754.5	30	0	233.78	0.106			+	48094	VSTGFRGLGI	10	55	503.78667829611027	NaN	0	503.78814697265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSTGFRGLGI_	REV__tr|U7SK84|U7SK84_FUSNUTrksystempotassiumuptakeproteinTrkAOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02136PE=4SV=1	51.33545320467046	0.297159550775418	5				NaN	NaN	0	NaN	3043	3262	6305
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6308	21.64	NaN	1860.3	30	0	144.28	0.106	+			38200	SQFLAPKAMKK	11	62	624.8625429970825	1247.710533060965	2	624.8619384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SQFLAPKAMKK_	ENSG00000214530|ENST00000334805|STARD10;ENST00000535075.1_1_11:72465944-72466832:-|nuORF;ENST00000543089.1_1_11:72465944-72468974:-|nuORF	43.5013094617712	0.5100344455026135	5				NaN	NaN	0	NaN	3044	3262	6305
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6309	21.642	NaN	1111.3	30	0	145.62	0.106	+			24384	LFTIARQFL	9	50	554.8289184570312	NaN	0	554.8289184570312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LFTIARQFL_	ZNF217|p.A693Lfs*10|1|0.48|ENSG00000171940|chr20:53576687-53576687|C/-|frameshift_variant	30.317721548370564	0.32449924987115025	5				NaN	NaN	0	NaN	3045	3262	6305
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6310	21.644	NaN	1310.6	30	0	90.196	0.106	+			17051	HQNFESYKP	9	59	575.2709614677156	1148.527370002231	2	575.2701416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HQNFESYKP_	ENSG00000143643|ENST00000366661|TTC13;nc|ENSG00000143643|Q8NBP0-2|TTC13;TTC13|p.R627Nfs*8|1|0.19|ENSG00000143643|chr1:230921438-230921439|TC/-|frameshift_variant;TTC13|p.V488G|1|0.22|ENSG00000143643|chr1:230925642-230925642|A/C|missense_variant	51.19269402634007	0.2889735674168909	5				NaN	NaN	0	NaN	3046	3262	6305
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6311	21.645	NaN	2031.6	30	0	406.74	0.106	+			30561	QALRYKEL	8	56	510.7963272788167	1019.5781016244334	2	510.7971496582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QALRYKEL_	ENSG00000107443|ENST00000465148|CCNJ;nc|ENSG00000107443|Q5T5M9-2|CCNJ;nc|ENSG00000107443|Q5T5M9|CCNJ	76.84663266511073	0.3498490246073164	5				NaN	NaN	0	NaN	3047	3262	6305
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6312	21.647	NaN	1209.8	30	0	75.118	0.036			+	26952	LYGSKHVEK	9	55	530.7939466841757	NaN	0	530.7946166992188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LYGSKHVEK_	REV__ENSG00000092820|ENST00000367075|EZR;REV__ENSG00000147065|ENST00000360270|MSN;REV__ENST00000511640.1_1_5:25909808-25910855:+|nuORF;REV__MSN|p.P297Afs*2|1|0.34|ENSG00000147065|chrX:65735356-65735357|-/A|frameshift_variant	44.377184641726394	0.24544280798894275	5				NaN	NaN	0	NaN	3048	3262	6305
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6327	21.679	NaN	69068	30	0	13657	0.214				-1	 	0	69	453.2570359743373	904.4995190154747	2	453.2557373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3060	3265	6326
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6328	21.682	NaN	36609	30	0	5309.6	0.106	+			6208	AVQRTLLEK	9	91	529.3225567661242	1056.6305605990483	2	529.321533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVQRTLLEK_	ENSG00000002586|ENST00000381192|CD99;ENST00000381177.6_1_X:2656215-2658842:+|nuORF;nc|ENSG00000292348|P14209-3|CD99	114.85826248499774	0.024312442104607014	5				NaN	NaN	0	NaN	3061	3265	6326
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6329	21.684	NaN	5776.4	30	0	716.58	0.106	+			17691	IEKVEHSDL	9	68	535.2806354730161	1068.5467180128321	2	535.279541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IEKVEHSDL_	B2M|p.Y98Lfs*5|1|0.08|ENSG00000166710|chr15:44715648-44715648|A/-|frameshift_variant;ENSG00000166710|ENST00000648006|B2M;ENST00000559720.5_1_15:45003705-45007919:+|nuORF	138.06239232086	0.011389075116295402	5				NaN	NaN	0	NaN	3062	3265	6326
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6330	21.686	NaN	2020.6	30	0	898.59	0.106	+			46402	VENGTLSKN	9	47	481.2518952453287	960.4892375574574	2	481.25067138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VENGTLSKN_	sp|Q6SWC4|UL06_HCMVMUncharacterizedproteinUL6OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL6PE=3SV=1	39.252832667884924	0.4290233611298554	5				NaN	NaN	0	NaN	3063	3265	6326
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6331	21.688	NaN	2541.2	30	0	524.5	0.106	+			26517	LTPTHGEM	8	58	443.21139888368515	884.4082448341703	2	443.2100524902344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LTPTHGEM_	ENSG00000204574|ENST00000326195|ABCF1;nc|ENSG00000204574|Q8NE71-2|ABCF1	31.954861631926434	0.7126016770032289	5				NaN	NaN	0	NaN	3064	3265	6326
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6332	21.69	NaN	1223.2	30	0	105.3	0.035	+			42349	TAHHLGLLK	9	41	330.5344615444136	NaN	0	330.53436279296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TAHHLGLLK_	ENSG00000185721|ENST00000331457|DRG1;ENST00000433341.5_1_22:31795606-31819296:+|nuORF	23.04248740728303	0.3589936788096251	5				NaN	NaN	0	NaN	3065	3265	6326
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6333	21.69	NaN	1282.2	30	0	300.35	0.139			+	26937	LYGDYHAN	8	42	476.7109150850191	NaN	0	476.7107238769531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LYGDYHAN_	REV__ENSG00000079150|ENST00000424785|FKBP7;REV__ENST00000464248.1_1_2:179330632-179343265:-|nuORF;REV__ENST00000470945.1_1_2:179330657-179343310:-|nuORF;REV__nc|ENSG00000079150|Q9Y680-1|FKBP7;REV__nc|ENSG00000079150|Q9Y680-3|FKBP7	47.91560031466742	1.7418937515398478	5				NaN	NaN	0	NaN	3066	3265	6326
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6351	21.729	NaN	3394.6	30	0	311.36	0.214	+			46066	VCLCTIFLVA	10	63	598.3129555692575	1194.611358205315	2	598.3119506835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_VC(Carbamidomethyl (C))LC(Carbamidomethyl (C))TIFLVA_	SLC7A7|p.F424V|1|0.33|ENSG00000155465|chr14:22774092-22774092|A/C|missense_variant	97.47269410471826	0.08829120183885207	5				NaN	NaN	0	NaN	3081	3268	6350
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6352	21.733	NaN	3235.5	30	0	769.64	0.106			+	47466	VQAEVVSR	8	53	444.2522119051389	886.4898708770778	2	444.2510070800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VQAEVVSR_	REV__ENSG00000086619|ENST00000354619|ERO1B;REV__nc|ENSG00000086619|Q86YB8-2|ERO1B	62.107414245175825	0.4809183816468817	5				NaN	NaN	0	NaN	3082	3268	6350
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6353	21.734	NaN	3421	30	0	495.31	0.106			+	24942	LKWELGQY	8	68	518.7774579108229	1035.5403628884458	2	518.7766723632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LKWELGQY_	REV__ABCB6|p.S490L|1|0.07|ENSG00000115657|chr2:219213935-219213935|G/A|missense_variant	53.351449002276354	0.5676011784961348	5				NaN	NaN	0	NaN	3083	3268	6350
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6354	21.736	NaN	7935.8	30	0	739.86	0.106			+	47762	VSGQVWRR	8	75	494.27812583366176	986.5416987341235	2	494.2765197753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSGQVWRR_	REV__ENST00000265801.6_2_8:20106968-20107088:-|nuORF	56.72105179125745	0.5342425954139568	5				NaN	NaN	0	NaN	3084	3268	6350
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6355	21.738	NaN	2922.8	30	0	1222.8	0.106	+			31617	QLYWSHPRK	9	52	607.8264410095521	1213.6383290859042	2	607.8251342773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QLYWSHPRK_	ENSG00000213741|ENST00000245458|RPS29;ENST00000554075.1_1_14:50052568-50053064:-|nuORF;ENST00000557367.2_1_14:50053001-50053064:-|nuORF;nc|ENSG00000213741|P62273-2|RPS29	58.22992032128504	0.22837015374068087	5				NaN	NaN	0	NaN	3085	3268	6350
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6356	21.74	NaN	1131.4	30	0	516.33	0.106	+			2761	ARIPLTSAPR	10	27	361.2187824551696	NaN	0	361.2030029296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ARIPLTSAPR_	ENST00000517420.1_1_8:23193692-23193839:+|nuORF	13.507942900623993	0.4201028297492154	5				NaN	NaN	0	NaN	3086	3268	6350
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6357	21.742	NaN	1154.9	30	0	206.05	0.033			+	7283	DAPLRLQG	8	42	435.24570945706853	NaN	0	435.2454833984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DAPLRLQG_	REV__ENSG00000153395|ENST00000283415|LPCAT1	38.80614096846853	1.7418937515398478	5				NaN	NaN	0	NaN	3087	3268	6350
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6370	21.769	NaN	5293.1	30	0	568.41	0.215	+			7123	DAAKNQVAM	9	70	474.235163660875	946.45577438855	2	474.2340087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DAAKNQVAM_	ENSG00000109971|ENST00000534624|HSPA8;ENSG00000126803|ENST00000247207|HSPA2;ENSG00000204390|ENST00000375654|HSPA1L;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000531063.1_1_11:122931759-122932032:-|nuORF;ENST00000532167.5_1_11:122930938-122932032:-|nuORF;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;ENST00000533238.5_1_11:122929516-122932032:-|nuORF;HSPA2|p.G138Afs*8|3|0.33|ENSG00000126803|chr14:64541257-64541257|G/-|frameshift_variant;HSPA8|p.K569Dfs*6|1|0.3|ENSG00000109971|chr11:123058302-123058303|TC/-|frameshift_variant;nc|ENSG00000109971|P11142-2|HSPA8	74.25504064058377	0.12238981753128622	5				NaN	NaN	0	NaN	3097	3271	6369
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6371	21.773	NaN	3183.3	30	0	698.44	0.106			+	37527	SLLQDGERL	9	54	515.7796666456584	NaN	0	515.7801513671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLLQDGERL_	REV__AHNAK2|p.D1643Tfs*9|1|0.12|ENSG00000185567|chr14:104950524-104950524|C/-|frameshift_variant;REV__AHNAK2|p.D4448Gfs*6|1|0.2|ENSG00000185567|chr14:104942108-104942109|-/C|frameshift_variant;REV__AHNAK2|p.D983Tfs*9|1|0.16|ENSG00000185567|chr14:104952504-104952504|C/-|frameshift_variant;REV__AHNAK2|p.E5149Gfs*8|1|0.32|ENSG00000185567|chr14:104940005-104940006|-/C|frameshift_variant;REV__AHNAK2|p.E5446Gfs*7|1|0.32|ENSG00000185567|chr14:104939114-104939115|-/C|frameshift_variant;REV__AHNAK2|p.F346Sfs*42|1|0.12|ENSG00000185567|chr14:104954416-104954416|C/-|frameshift_variant;REV__AHNAK2|p.L4206Cfs*19|1|0.12|ENSG00000185567|chr14:104942835-104942835|G/-|frameshift_variant;REV__AHNAK2|p.P2536Lfs*14|1|0.11|ENSG00000185567|chr14:104947844-104947844|G/-|frameshift_variant;REV__ENSG00000185567|ENST00000333244|AHNAK2;REV__ENST00000555122.1_1_14:105421221-105423995:-|nuORF;REV__nc|ENSG00000185567|Q8IVF2-3|AHNAK2	47.95952297671804	0.22075498469600283	5				NaN	NaN	0	NaN	3098	3271	6369
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6372	21.775	NaN	7659.2	30	0	889.92	0.106	+			30099	PRFGGSRAGP	10	73	501.2677485743417	1000.5209442154834	2	501.26690673828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PRFGGSRAGP_	DDX5|p.D424Ifs*31|1|0.03|ENSG00000108654|chr17:64500720-64500721|-/AAGCAATTAAT|frameshift_variant;DDX5|p.D572Nfs*6|1|0.04|ENSG00000108654|chr17:64500054-64500055|-/TGACAAGATAGTT|frameshift_variant;DDX5|p.R502Gfs*87|1|0.21|ENSG00000108654|chr17:64500264-64500264|T/-|frameshift_variant;ENSG00000108654|ENST00000225792|DDX5;ENST00000581230.5_1_17:62498125-62502378:-|nuORF;ENST00000585223.1_1_17:62500698-62502378:-|nuORF;nc|ENSG00000108654|P17844-2|DDX5	75.04331003522576	0.23611669241777622	5				NaN	NaN	0	NaN	3099	3271	6369
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6373	21.776	NaN	4009.6	30	0	865.95	0.106				-1	 	0	52	344.5457977636755	1030.6155638912267	3	344.54510498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3100	3271	6369
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6374	21.778	NaN	2568.1	30	0	996.73	0.106			+	18411	ISAASMTQTA	10	56	490.7390200344927	979.4634871357854	2	490.7375793457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ISAASMTQTA_	REV__ENST00000595618.5_2_19:17273217-17283270:+|nuORF	20.94693142431847	0.7087701759873708	5				NaN	NaN	0	NaN	3101	3271	6369
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6375	21.78	NaN	1578.7	30	0	156.16	0.035	+			12142	GAIEKTFTK	9	55	497.78297421562513	993.5513954980503	2	497.7821960449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GAIEKTFTK_	ENSG00000140006|ENST00000620954|WDR89	68.84614121027924	0.14577793175421136	5				NaN	NaN	0	NaN	3102	3271	6369
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6376	21.781	NaN	735.58	30	0	60.415	0.138			+	12567	GEGPPLFL	8	40	415.22519327380047	828.435833614401	2	415.2240295410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GEGPPLFL_	REV__ENSG00000136881|ENST00000259407|BAAT	46.76643321282427	0.6143254112625767	5				NaN	NaN	0	NaN	3103	3271	6369
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6391	21.813	NaN	5838.9	30	0	888.79	0.214	+			50340	WVELPITK	8	62	493.2886190308808	984.5626851285616	2	493.2873229980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WVELPITK_	ENSG00000005810|ENST00000544440|MYCBP2;MYCBP2|p.C1064Ifs*31|1|0.09|ENSG00000005810|chr13:77211267-77211279|TTATCAGAAGGCA/-|frameshift_variant;MYCBP2|p.G651Efs*24|1|0.04|ENSG00000005810|chr13:77257781-77257782|-/ATTAGTTTTT|frameshift_variant;MYCBP2|p.N1867Tfs*9|1|0.15|ENSG00000005810|chr13:77171572-77171572|T/-|frameshift_variant;MYCBP2|p.N3049*|1|0.11|ENSG00000005810|chr13:77097894-77097895|TT/-|frameshift_variant;MYCBP2|p.P4047Qfs*26|2|0.35|ENSG00000005810|chr13:77067782-77067782|G/-|frameshift_variant;MYCBP2|p.T1507Ffs*24|1|0.04|ENSG00000005810|chr13:77185189-77185190|-/TTGTAAA|frameshift_variant;MYCBP2|p.T4311Pfs*37|1|0.14|ENSG00000005810|chr13:77059619-77059619|G/-|frameshift_variant;MYCBP2|p.V3749*|1|0.12|ENSG00000005810|chr13:77081486-77081486|C/-|frameshift_variant;nc|ENSG00000005810|O75592-2|MYCBP2	63.30626980617807	0.4690498839812213	5				NaN	NaN	0	NaN	3115	3274	6390
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6392	21.817	NaN	2594.6	30	0	314.09	0.106			+	8012	DTMAVERVI	9	66	517.2687225370345	1032.5228921408689	2	517.267333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DTMAVERVI_	REV__ENSG00000185504|ENST00000327787|FAAP100;REV__nc|ENSG00000185504|Q0VG06-2|FAAP100;REV__nc|ENSG00000185504|Q0VG06-3|FAAP100	79.71258880314673	0.09879134589249085	5				NaN	NaN	0	NaN	3116	3274	6390
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6393	21.819	NaN	2250.1	30	0	351.99	0.106				-1	 	0	46	364.7379960970353	NaN	0	364.73797607421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3117	3274	6390
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6394	21.821	NaN	2051.7	30	0	171.11	0.106			+	24289	LEYLVNTRP	9	68	552.8066249798007	1103.5986970264014	2	552.806884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LEYLVNTRP_	REV__ENSG00000127948|ENST00000461988|POR;REV__ENST00000487247.5_1_7:75612990-75614618:+|nuORF;REV__POR|p.I444Sfs*101|1|0.44|ENSG00000127948|chr7:75985133-75985133|C/-|frameshift_variant	47.95952297671804	0.32689736945648856	5				NaN	NaN	0	NaN	3118	3274	6390
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6395	21.822	NaN	4529.8	30	0	1227.2	0.106			+	9637	ELRNSLEEP	9	49	362.8517083871393	NaN	0	362.51715087890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ELRNSLEEP_	REV__ENSG00000185753|ENST00000327877|CXorf38;REV__nc|nan|Q8TB03-2|CXorf38	29.170058357718403	0.3302935627494407	5				NaN	NaN	0	NaN	3119	3274	6390
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6396	21.824	NaN	1979.3	30	0	312.42	0.033	+			13956	GSAITGPVAK	10	53	450.76204236824316	899.5095318032863	2	450.76092529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GSAITGPVAK_	ENSG00000125691|ENST00000479035|RPL23;ENST00000584583.1_1_17:37006387-37006753:-|nuORF	46.45678178249821	0.4896490706773647	5				NaN	NaN	0	NaN	3120	3274	6390
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6397	21.825	NaN	2245.9	30	0	320.56	0.142			+	-1	NKMLILEVE	9	42	368.8702357065535	NaN	0	368.8721008300781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_NKM(Oxidation (M))LILEVE_	REV__ENSG00000167117|ENST00000450727|ANKRD40CL	39.252832667884924	0.27938773122138094	5				NaN	NaN	0	NaN	3121	3274	6390
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6415	21.864	NaN	5608.8	30	0	1476.9	0.214	+			22317	KTFEGNLTTK	10	71	569.8096271930575	1137.604701452915	2	569.8087768554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTFEGNLTTK_	ENSG00000174231|ENST00000304992|PRPF8	154.0112374973812	0.007783311651969589	5				NaN	NaN	0	NaN	3136	3277	6414
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6416	21.868	NaN	11353	30	0	2077.3	0.106				-1	 	0	76	481.25983099322366	960.5051090532473	2	481.2583312988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3137	3277	6414
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6417	21.87	NaN	2798.8	30	0	333.91	0.106	+			15375	GTVYFKEGK	9	61	514.7745713642227	1027.5345897952452	2	514.7741088867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTVYFKEGK_	ENSG00000004478|ENST00000001008|FKBP4	45.97224482568171	0.3502073465782774	5				NaN	NaN	0	NaN	3138	3277	6414
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6418	21.872	NaN	5785.2	30	0	871.61	0.106	+			46908	VISRAISVK	9	60	486.8142373474723	971.6139217617446	2	486.81341552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VISRAISVK_	ENST00000530759.1_1_11:76155338-76155506:-|nuORF	82.7504851949679	0.08565546331141553	5				NaN	NaN	0	NaN	3139	3277	6414
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6419	21.873	NaN	10651	30	0	1084.1	0.106				-1	 	0	77	468.7800434459978	935.5455339587957	2	468.7792053222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3140	3277	6414
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6420	21.875	NaN	1508.7	30	0	106	0.035	+			50483	YAKEAQQSL	9	63	519.26708984375	NaN	0	519.26708984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YAKEAQQSL_	ENSG00000143374|ENST00000369064|TARS2;nc|ENSG00000143374|Q9BW92-2|TARS2	40.05817265558897	0.275207446262312	5				NaN	NaN	0	NaN	3141	3277	6414
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6421	21.876	NaN	871.04	30	0	81.23	0.141			+	-1	HIRMHNKL	8	53	532.7905883789062	NaN	0	532.7905883789062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_HIRM(Oxidation (M))HNKL_	REV__ENSG00000184828|ENST00000590800|ZBTB7C	33.51558372728122	1.7418937515398478	5				NaN	NaN	0	NaN	3142	3277	6414
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6434	21.906	NaN	63116	30	0	21332	0.214				-1	 	0	63	384.7729108975081	767.5312688618162	2	384.7720642089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3152	3280	6433
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6435	21.909	NaN	4142.3	30	0	485.23	0.106	+			4681	ATLSEARLK	9	69	494.7942650325961	987.5739771319923	2	494.7929992675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATLSEARLK_	ENSG00000153815|ENST00000537098|CMIP;nc|ENSG00000153815|Q8IY22-2|CMIP;nc|ENSG00000153815|Q8IY22-3|CMIP	83.6470233535746	0.08277643980271215	5				NaN	NaN	0	NaN	3153	3280	6433
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6436	21.911	NaN	3587.9	30	0	888.89	0.106	+			50552	YASTAKCL	8	53	457.22709378787033	912.4396346425407	2	457.22601318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_YASTAKC(Carbamidomethyl (C))L_	ENSG00000142089|ENST00000399808|IFITM3;ENSG00000185201|ENST00000616316|IFITM2;ENSG00000185885|ENST00000408968|IFITM1;ENST00000505282.1_1_4:66959972-66960239:+|nuORF;ENST00000527146.1_2_11:308871-309162:+|nuORF	116.90359126533652	0.23898233959989007	5				NaN	NaN	0	NaN	3154	3280	6433
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6437	21.913	NaN	3291.5	30	0	447.08	0.106	+			23336	KYSLVKNKI	9	62	546.8437322895346	1091.6729116458691	2	546.843017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KYSLVKNKI_	ENSG00000188643|ENST00000368706|S100A16;ENST00000474991.1_1_1:153580188-153585458:-|nuORF	56.43379154798735	0.2433427591689151	5				NaN	NaN	0	NaN	3155	3280	6433
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6438	21.915	NaN	2569.2	30	0	298.11	0.106			+	23271	KYKLSKGP	8	61	460.78161017218326	NaN	0	460.78167724609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KYKLSKGP_	REV__ENSG00000069020|ENST00000403625|MAST4;REV__MAST4|p.F792Kfs*12|1|0.06|ENSG00000069020|chr5:67134667-67134668|-/TAAAAGATAATTGCAA|frameshift_variant;REV__MAST4|p.G1923Qfs*4|1|0.33|ENSG00000069020|chr5:67164945-67164946|GG/-|frameshift_variant;REV__MAST4|p.K1789Sfs*10|1|0.22|ENSG00000069020|chr5:67164544-67164544|A/-|frameshift_variant;REV__MAST4|p.P1392Rfs*37|1|0.48|ENSG00000069020|chr5:67163351-67163351|C/-|frameshift_variant;REV__MAST4|p.S1880Afs*59|1|0.41|ENSG00000069020|chr5:67164811-67164811|C/-|frameshift_variant;REV__nc|ENSG00000069020|O15021-4|MAST4	49.44154591367651	1.7418937515398478	5				NaN	NaN	0	NaN	3156	3280	6433
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6439	21.916	NaN	3442.9	30	0	622.64	0.106	+			26125	LSPLRGRSPA	10	61	527.3128327338223	1052.6111125344446	2	527.3125610351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSPLRGRSPA_	ENST00000368039.2_1_1:160771962-160772262:+|nuORF	30.568863376406313	0.6301935916953115	5				NaN	NaN	0	NaN	3157	3280	6433
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6440	21.918	NaN	3086	30	0	1307.6	0.037			+	32510	QVQMMRINK	9	68	574.3062400119809	1146.5979270907617	2	574.3057250976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QVQMMRINK_	REV__APBA2|p.A397V|1|0.62|ENSG00000034053|chr15:29093195-29093195|C/T|missense_variant	96.19043198914106	0.047412499214244314	5				NaN	NaN	0	NaN	3158	3280	6433
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6455	21.95	NaN	21426	30	0	2108.3	0.214	+			24210	LERKVESL	8	88	487.28881947634	972.56308601948	2	487.2870788574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LERKVESL_	ENSG00000026025|ENST00000544301|VIM;ENST00000421459.2_2_10:17272631-17276850:+|nuORF	115.49404669440601	0.24099756539272307	5				NaN	NaN	0	NaN	3170	3283	6454
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6456	21.953	NaN	9452.8	30	0	862.84	0.106	+			38080	SPSVRRWY	8	68	525.7779841727835	1049.5414154123669	2	525.777587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SPSVRRWY_	ENST00000471349.1_1_7:882587-882716:+|nuORF	44.116797842482775	0.6307669463330267	5				NaN	NaN	0	NaN	3171	3283	6454
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6457	21.955	NaN	3216.9	30	0	848.87	0.106	+			46004	VAVERARAL	9	63	492.8021350814193	983.5897172296386	2	492.80072021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VAVERARAL_	ENSG00000126217|ENST00000535094|MCF2L;nc|ENSG00000126217|O15068-10|MCF2L;nc|ENSG00000126217|O15068-2|MCF2L;nc|ENSG00000126217|O15068-3|MCF2L;nc|ENSG00000126217|O15068-4|MCF2L;nc|ENSG00000126217|O15068-5|MCF2L;nc|ENSG00000126217|O15068-6|MCF2L;nc|ENSG00000126217|O15068-8|MCF2L;nc|ENSG00000126217|O15068|MCF2L	31.954861631926434	0.5046124803899898	5				NaN	NaN	0	NaN	3172	3283	6454
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6458	21.957	NaN	2330.3	30	0	280.52	0.106	+			915	AEIEGLKGQRA	11	64	586.3263401244806	1170.638127315761	2	586.3247680664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEIEGLKGQRA_	CON__H-INV:HIT000292931;CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;ENST00000547031.5_1_12:53292389-53294972:-|nuORF;ENST00000562317.1_1_16:78082520-78083381:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	81.52500206392136	0.13965942453989383	5				NaN	NaN	0	NaN	3173	3283	6454
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6459	21.959	NaN	2855.2	30	0	244.49	0.106	+			38106	SPVNSSKQPSY	11	66	597.2947479120368	1192.5749428908734	2	597.29345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SPVNSSKQPSY_	ENSG00000159199|ENST00000393366|ATP5MC1;ENST00000502964.5_1_17:46971694-46973128:+|nuORF;ENST00000513781.5_1_17:46970480-46973128:+|nuORF	102.0615471778698	0.05642515548841253	5				NaN	NaN	0	NaN	3174	3283	6454
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6460	21.961	NaN	14757	30	0	4072	0.035			+	7537	DGTLRVLSL	9	50	325.1947045226178	972.5622841680536	3	325.1939697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DGTLRVLSL_	REV__ENSG00000127481|ENST00000375254|UBR4;REV__ENST00000419533.1_1_1:19477984-19504233:-|nuORF;REV__nc|ENSG00000127481|Q5T4S7-2|UBR4;REV__nc|ENSG00000127481|Q5T4S7-3|UBR4;REV__nc|ENSG00000127481|Q5T4S7-4|UBR4;REV__nc|ENSG00000127481|Q5T4S7-5|UBR4;REV__UBR4|p.C4515Wfs*2|1|0.06|ENSG00000127481|chr1:19095626-19095626|G/-|frameshift_variant;REV__UBR4|p.L4771Cfs*7|1|0.25|ENSG00000127481|chr1:19088878-19088878|G/-|frameshift_variant;REV__UBR4|p.P4047Ifs*4|1|0.4|ENSG00000127481|chr1:19106932-19106933|GG/-|frameshift_variant	25.450171626174864	0.5654022654467333	5				NaN	NaN	0	NaN	3175	3283	6454
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6461	21.961	NaN	2884.7	30	0	339.16	0.14	+			3832	ATAIGMPVEK	10	59	516.7739442017831	1031.5333354703662	2	516.7736206054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_ATAIGM(Oxidation (M))PVEK_	ENSG00000109736|ENST00000355443|MFSD10;ENST00000509676.1_1_4:2934766-2935650:-|nuORF;MFSD10|p.S111Gfs*48|1|0.44|ENSG00000109736|chr4:2933125-2933147|GGGCGCCTCCCCAAGCAGTCAGA/-|frameshift_variant	76.16968421966216	0.22691431239609447	5				NaN	NaN	0	NaN	3176	3283	6454
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6477	21.997	NaN	4430.2	30	0	860.98	0.214	+			12894	GESAVGKSSL	10	51	467.74632434812025	933.4780957630405	2	467.7455139160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GESAVGKSSL_	ENSG00000108774|ENST00000346213|RAB5C;ENSG00000111540|ENST00000360299|RAB5B;ENSG00000144566|ENST00000273047|RAB5A;ENST00000476544.1_1_3:19992384-19992582:+|nuORF;ENST00000546810.1_1_12:56367874-56383936:+|nuORF;ENST00000550013.1_1_17:40282343-40282577:-|nuORF;nc|ENSG00000108774|P51148-2|RAB5C;nc|ENSG00000111540|P61020-2|RAB5B;nc|ENSG00000144566|P20339-2|RAB5A	112.2953585152457	0.0411829880542106	5				NaN	NaN	0	NaN	3189	3286	6476
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6478	22	NaN	9804.3	30	0	3238.5	0.106	+			35361	SAPPLRHSW	9	42	350.8544076087163	1049.541393426349	3	350.85369873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAPPLRHSW_	ENSG00000198216|ENST00000367573|CACNA1E;nc|ENSG00000198216|Q15878-2|CACNA1E;nc|ENSG00000198216|Q15878-3|CACNA1E	26.69291269510374	0.5537881896960711	5				NaN	NaN	0	NaN	3190	3286	6476
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6479	22.002	NaN	2323.6	30	0	1316.4	0.106				-1	 	0	51	496.25727077858727	990.4999886239746	2	497.2896728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3191	3286	6476
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6480	22.004	NaN	1445.4	30	0	127.15	0.106	+			35401	SAQNTKFFK	9	59	535.7852836105753	NaN	0	535.7852172851562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SAQNTKFFK_	ENSG00000140259|ENST00000267812|MFAP1;ENST00000484386.1_1_15:44097294-44102132:-|nuORF	35.15202426646627	0.3000918603816441	5				NaN	NaN	0	NaN	3192	3286	6476
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6481	22.006	NaN	1991	30	0	163.06	0.106				-1	 	0	51	508.3176373368725	1014.620721740545	2	508.3168029785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3193	3286	6476
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6482	22.008	NaN	1806.5	30	0	163.16	0.036	+			22706	KVANGRVFTL	10	54	552.8306733308807	1103.6467937285613	2	552.830322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KVANGRVFTL_	VWCE|p.Q698R|1|0.28|ENSG00000167992|chr11:61265002-61265002|T/C|missense_variant	35.17822180527639	0.5925517082438457	5				NaN	NaN	0	NaN	3194	3286	6476
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6483	22.008	NaN	1474.1	30	0	102.98	0.14	+			26772	LVQKAILQK	9	65	520.845093447791	NaN	0	520.8450927734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LVQKAILQK_	ENSG00000116731|ENST00000311066|PRDM2;nc|ENSG00000116731|Q13029-2|PRDM2;nc|ENSG00000116731|Q13029-3|PRDM2;nc|ENSG00000116731|Q13029-5|PRDM2;PRDM2|p.P1648Qfs*14|1|0.24|ENSG00000116731|chr1:13782731-13782731|G/-|frameshift_variant	104.74654710444128	0.014441433212055448	5				NaN	NaN	0	NaN	3195	3286	6476
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6497	22.04	NaN	7980.2	30	0	1013.6	0.214	+			13932	GRRRVCWGK	9	74	373.21052043227706	1116.6097318970312	3	373.5415954589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GRRRVCWGK_	ENST00000225729.7_1_17:18010580-18010793:+|nuORF	24.519189625965996	0.574102787014149	5				NaN	NaN	0	NaN	3206	3289	6496
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6498	22.043	NaN	2737	30	0	395.65	0.106	+			2461	APLKSKMIY	9	53	533.8029274945984	1065.5913020559967	2	533.8027954101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_APLKSKM(Oxidation (M))IY_	ENSG00000125868|ENST00000246069|DSTN;ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65623104-65623215:-|nuORF;ENST00000602547.1_1_12:6994092-6994545:+|nuORF;nc|ENSG00000125868|P60981-2|DSTN;nc|ENSG00000165410|Q9Y281-3|CFL2	41.42661286455405	0.403525789677298	5				NaN	NaN	0	NaN	3207	3289	6496
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6499	22.045	NaN	1872.1	30	0	185.8	0.106	+			18577	ISPHGNAL	8	51	404.7199524791173	807.4253520250346	2	404.718994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ISPHGNAL_	ENSG00000166855|ENST00000300107|CLPX;ENST00000558103.1_1_15:65450907-65451087:-|nuORF;ENST00000558958.1_1_15:65449172-65477491:-|nuORF	63.30626980617807	0.4690498839812213	5				NaN	NaN	0	NaN	3208	3289	6496
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6500	22.047	NaN	2839.2	30	0	911.89	0.106				-1	AAPHSCSL	8	41	421.6946797151958	NaN	0	421.69439697265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_AAPHSC(Carbamidomethyl (C))SL_	ENST00000589223.5_1_19:2111584-2111854:-|nuORF	33.51558372728122	1.7418937515398478	5				NaN	NaN	0	NaN	3209	3289	6496
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6501	22.049	NaN	2904.3	30	0	554.76	0.106				-1	ASMKKVKSL	9	44	336.5342498906769	NaN	0	336.5343933105469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_ASM(Oxidation (M))KKVKSL_	ENST00000369426.9_1_1:119575536-119588262:-|nuORF	32.81241826257853	0.3119040447479903	5				NaN	NaN	0	NaN	3210	3289	6496
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6502	22.051	NaN	1139.1	30	0	135.07	0.038	+			5923	AVLEKQDISDK	11	53	623.338623046875	NaN	0	623.338623046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AVLEKQDISDK_	ENSG00000135932|ENST00000258418|CAB39	101.55522638252114	0.033537815014109025	5				NaN	NaN	0	NaN	3211	3289	6496
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6503	22.051	NaN	1698.8	30	0	299.78	0.142			+	50239	WPGGPPLLVA	10	56	503.78700643694344	NaN	0	503.7874450683594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_WPGGPPLLVA_	REV__ENSG00000124587|ENST00000304611|PEX6;REV__nc|ENSG00000124587|Q13608-2|PEX6;REV__nc|ENSG00000124587|Q13608-3|PEX6	39.252832667884924	0.37128895876774715	5				NaN	NaN	0	NaN	3212	3289	6496
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6515	22.079	NaN	14451	30	0	2758.5	0.214				-1	 	0	63	496.25727077858727	990.4999886239746	2	496.2560729980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3221	3292	6514
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6516	22.082	NaN	18270	30	0	6335.5	0.106				-1	 	0	71	490.2887782777139	978.5630036222278	2	490.2873229980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3222	3292	6514
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6517	22.084	NaN	4935.9	30	0	580.19	0.106				-1	 	0	52	397.23835194038196	792.4621509475639	2	397.2373962402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3223	3292	6514
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6518	22.086	NaN	16298	30	0	6750.9	0.106				-1	 	0	37	327.19489663897383	978.5628605171215	3	327.1942443847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3224	3292	6514
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6519	22.088	NaN	3554.4	30	0	1918.8	0.106	+			38053	SPQVRAAL	8	51	421.24883056851354	840.4831082038271	2	421.247802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SPQVRAAL_	ENST00000372703.1_1_1:40974852-40974987:+|nuORF	40.77816245573522	0.6514838689002179	5				NaN	NaN	0	NaN	3225	3292	6514
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6520	22.09	NaN	3468.9	30	0	914.78	0.106	+			6366	AVTTVVNPK	9	47	464.77742813778	927.5403033423601	2	464.7764892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AVTTVVNPK_	ENSG00000150093|ENST00000302278|ITGB1	98.62937762414208	0.04060045538121712	5				NaN	NaN	0	NaN	3226	3292	6514
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6521	22.091	NaN	6606.5	30	0	1426.8	0.034				-1	 	0	65	486.31708086537566	970.6196087975513	2	486.3153076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3227	3292	6514
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6535	22.121	NaN	75688	30	0	19654	0.214				-1	 	0	94	373.21052043227706	1116.6097318970312	3	373.20989990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3238	3295	6534
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6536	22.124	NaN	13885	30	0	7971.6	0.106				-1	 	0	54	324.5470457277495	970.6193077834484	3	324.5464172363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3239	3295	6534
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6537	22.126	NaN	19328	30	0	5662.8	0.106				-1	 	0	66	559.3120223267409	1116.6094917202818	2	559.3114624023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3240	3295	6534
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6538	22.128	NaN	4351	30	0	575.03	0.106	+			46858	VIIAKVTAK	9	56	471.8217781472451	941.6290033612902	2	471.8206481933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VIIAKVTAK_	ENSG00000155008|ENST00000373173|APOOL	27.882242232435846	0.5426732730940306	5				NaN	NaN	0	NaN	3241	3295	6534
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6539	22.13	NaN	8887.9	30	0	3677.3	0.106				-1	 	0	49	363.542103115951	1087.604479948053	3	363.5413818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3242	3295	6534
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6540	22.132	NaN	4614	30	0	2755.3	0.036	+			51504	YVPPKSREL	9	66	544.8096226094746	1087.604692285749	2	544.8092041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YVPPKSREL_	ENSG00000102879|ENST00000219150|CORO1A;ENST00000567034.5_1_16:30199450-30200005:+|nuORF	53.08895987439943	0.27122541748218487	5				NaN	NaN	0	NaN	3243	3295	6534
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6541	22.132	NaN	2142.8	30	0	384.69	0.142	+			19277	KAFNQGKIFK	10	64	590.8465285716313	1179.6785042100626	2	590.8456420898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KAFNQGKIFK_	ENSG00000254772|ENST00000329251|EEF1G;ENST00000526409.5_1_11:62327153-62342310:-|nuORF;nc|ENSG00000254772|P26641-2|EEF1G;NCEH1-EEF1G|1|fusion	67.49366992349736	0.29779660154124327	5				NaN	NaN	0	NaN	3244	3295	6534
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6555	22.164	NaN	6453.4	30	0	1526.8	0.214			+	9857	EPWVREPR	8	71	534.7833206332862	1067.5520883333722	2	534.7825927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EPWVREPR_	REV__ENSG00000106624|ENST00000223357|AEBP1	66.42927471994793	0.4381325844043345	5				NaN	NaN	0	NaN	3255	3298	6554
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6556	22.167	NaN	4421.3	30	0	417.47	0.106	+			39013	SSSGFVAIKK	10	67	512.2961665283633	1022.5777801235266	2	512.295166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSSGFVAIKK_	ENSG00000198478|ENST00000369838|SH3BGRL2;SH3BGRL2|p.P55Rfs*41|2|0.28|ENSG00000198478|chr6:79673727-79673727|C/-|frameshift_variant	104.42354056486148	0.06456012287859861	5				NaN	NaN	0	NaN	3256	3298	6554
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6557	22.169	NaN	4851.5	30	0	983.63	0.106	+			3694	ATAAAIGATPR	11	66	500.28364241157226	998.5527318899445	2	500.28240966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATAAAIGATPR_	ENSG00000137497|ENST00000393695|NUMA1;ENST00000540626.5_1_11:71714575-71718510:-|nuORF;nc|ENSG00000137497|Q14980-2|NUMA1;nc|ENSG00000137497|Q14980-5|NUMA1	84.81729255234993	0.11999117121320589	5				NaN	NaN	0	NaN	3257	3298	6554
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6558	22.171	NaN	6640.6	30	0	1123.5	0.106			+	43725	TKTNGVSDVL	10	64	517.2802163911382	1032.5458798490763	2	517.2793579101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TKTNGVSDVL_	REV__nc|ENSG00000083750|Q5VZM2|RRAGB	49.536043120802724	0.461275219792494	5				NaN	NaN	0	NaN	3258	3298	6554
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6559	22.173	NaN	1893.1	30	0	314.18	0.106	+			4931	ATQNSSQFMK	10	65	571.2700885029492	1140.5256240726983	2	571.2694091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATQNSSQFMK_	ENSG00000162227|ENST00000294168|TAF6L;ENST00000524976.5_1_11:62538888-62549806:+|nuORF;ENST00000532915.1_1_11:62538888-62545815:+|nuORF	56.632244143249146	0.3964695498866976	5				NaN	NaN	0	NaN	3259	3298	6554
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6560	22.175	NaN	1245.5	30	0	338.43	0.034	+			15251	GTTAVLTEK	9	42	460.2593556678913	918.5041584025827	2	460.2580261230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTTAVLTEK_	ENSG00000136930|ENST00000259457|PSMB7	29.170058357718403	0.5306379469863586	5				NaN	NaN	0	NaN	3260	3298	6554
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6561	22.175	NaN	1516.3	30	0	171.14	0.139	+			26854	LVVSDGEAGP	10	58	472.2421462211916	942.4697395091832	2	472.24005126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LVVSDGEAGP_	ENSG00000164946|ENST00000380880|FREM1;FREM1|p.S1085Afs*5|1|0.39|ENSG00000164946|chr9:14806682-14806682|T/-|frameshift_variant;FREM1|p.T1560Qfs*46|1|0.35|ENSG00000164946|chr9:14775969-14775969|C/-|frameshift_variant	51.33545320467046	0.4446945571623749	5				NaN	NaN	0	NaN	3261	3298	6554
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6577	22.21	NaN	76235	30	0	18424	0.214				-1	 	0	91	516.2498671911013	1030.4851814490025	2	516.2489013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3274	3301	6576
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6578	22.213	NaN	84050	30	0	38142	0.106				-1	 	0	74	344.5022494788105	1030.4849190366315	3	344.5015563964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3275	3301	6576
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6579	22.215	NaN	25655	30	0	3184.4	0.106				-1	 	0	93	338.49874584231907	1012.4744081271572	3	338.4980773925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3276	3301	6576
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6580	22.217	NaN	12706	30	0	4348.8	0.106				-1	 	0	62	437.21543417805964	872.4163154229193	2	437.2141418457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3277	3301	6576
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6581	22.219	NaN	2334.7	30	0	186.94	0.106	+			23253	KYIQRQETI	9	66	589.8308623667172	1177.6471718002342	2	589.8300170898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KYIQRQETI_	ENSG00000157601|ENST00000398598|MX1;MX1|p.G282Afs*9|1|0.29|ENSG00000157601|chr21:41441827-41441827|G/-|frameshift_variant;MX1|p.M372Cfs*4|1|0.37|ENSG00000157601|chr21:41445548-41445548|A/-|frameshift_variant;nc|ENSG00000157601|P20591-2|MX1	124.08010499294276	0.018729767491916592	5				NaN	NaN	0	NaN	3278	3301	6576
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6582	22.221	NaN	1404.3	30	0	138.09	0.106			+	46243	VEDTVAKH	8	49	449.73615055215083	897.4577481711017	2	449.7347412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VEDTVAKH_	REV__ENSG00000144488|ENST00000343063|ESPNL;REV__ENST00000477241.1_1_2:239037864-239040370:+|nuORF;REV__nc|ENSG00000144488|Q6ZVH7-2|ESPNL;REV__nc|ENSG00000144488|Q6ZVH7-3|ESPNL	37.15910966729921	0.6739408393984688	5				NaN	NaN	0	NaN	3279	3301	6576
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6583	22.223	NaN	887.99	30	0	128.02	0.032	+			2188	ALNGAIMK	8	38	409.23199462890625	NaN	0	409.23199462890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ALNGAIMK_	ENSG00000164120|ENST00000296522|HPGD;ENST00000511499.5_1_4:175413109-175416797:-|nuORF;nc|ENSG00000164120|P15428-3|HPGD;nc|ENSG00000164120|P15428-5|HPGD	25.450171626174864	1.7418937515398478	5				NaN	NaN	0	NaN	3280	3301	6576
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6597	22.252	NaN	12099	30	0	4325.6	0.214				-1	 	0	60	384.7729108975081	767.5312688618162	2	384.77197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3291	3304	6596
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6598	22.256	NaN	4576.5	30	0	410.21	0.106			+	-1	LCVGLFPKK	9	66	531.3116150956948	1060.6086772581896	2	531.3110961914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LC(Carbamidomethyl (C))VGLFPKK_	REV__CTPS1|p.D577*|1|0.1|ENSG00000171793|chr1:41010192-41010193|-/C|frameshift_variant;REV__ENSG00000171793|ENST00000650070|CTPS1;REV__ENST00000463285.5_1_1:41461708-41469783:+|nuORF;REV__nc|ENSG00000171793|P17812-2|CTPS1	47.91560031466742	0.327412564698279	5				NaN	NaN	0	NaN	3292	3304	6596
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6599	22.258	NaN	3285.2	30	0	978.44	0.106	+			39718	STIPSTAMHTR	11	52	601.3046786285765	1200.594804323953	2	601.3032836914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STIPSTAMHTR_	ENSG00000145113|ENST00000463781|MUC4;MUC4|p.N4902Tfs*8|1|0.37|ENSG00000145113|chr3:195761027-195761027|T/-|frameshift_variant;nc|ENSG00000145113|Q99102-10|MUC4;nc|ENSG00000145113|Q99102-11|MUC4;nc|ENSG00000145113|Q99102-13|MUC4;nc|ENSG00000145113|Q99102-15|MUC4;nc|ENSG00000145113|Q99102-16|MUC4;nc|ENSG00000145113|Q99102-17|MUC4;nc|ENSG00000145113|Q99102-2|MUC4;nc|ENSG00000145113|Q99102-3|MUC4;nc|ENSG00000145113|Q99102-5|MUC4;nc|ENSG00000145113|Q99102-7|MUC4;nc|ENSG00000145113|Q99102-8|MUC4;nc|ENSG00000145113|Q99102-9|MUC4	75.56570413236392	0.18934020192193834	5				NaN	NaN	0	NaN	3293	3304	6596
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6600	22.26	NaN	3270.6	30	0	605.11	0.106	+			13197	GIASSSIAAK	10	59	452.7581469699417	NaN	0	452.75811767578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GIASSSIAAK_	ENSG00000165949|ENST00000612813|IFI27;nc|ENSG00000165949|P40305-1|IFI27;nc|ENSG00000165949|P40305-3|IFI27;nc|ENSG00000165949|P40305-4|IFI27	87.69643885390035	0.06257964879869547	5				NaN	NaN	0	NaN	3294	3304	6596
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6601	22.262	NaN	4625.2	30	0	1360.8	0.106				-1	STLTIFRFCG	10	49	401.2053885847655	1200.5943363544966	3	401.20465087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_STLTIFRFC(Carbamidomethyl (C))G_	ENST00000510398.1_1_4:5141502-5170068:+|nuORF;ENST00000512018.5_1_4:5053633-5141954:+|nuORF;STK32B|p.V11Cfs*41|1|0.29|ENSG00000152953|chr4:5051888-5051888|C/-|frameshift_variant	44.377184641726394	0.5088115166961078	5				NaN	NaN	0	NaN	3295	3304	6596
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6602	22.263	NaN	878.09	30	0	235.5	0.035			+	25518	LPSVEALCY	9	44	497.7508239746094	NaN	0	497.7508239746094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LPSVEALCY_	REV__ENSG00000173011|ENST00000310074|TADA2B	24.20275056022122	0.35506675290109213	5				NaN	NaN	0	NaN	3296	3304	6596
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6603	22.264	NaN	1493.3	30	0	349.4	0.141			+	9597	ELLEKHLPD	9	52	547.2960815429688	NaN	0	547.2960815429688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ELLEKHLPD_	REV__ENSG00000174840|ENST00000311180|PDE12;REV__nc|ENSG00000174840|Q6L8Q7-2|PDE12	37.15910966729921	0.2899585034171616	5				NaN	NaN	0	NaN	3297	3304	6596
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6618	22.298	NaN	13764	30	0	2755.7	0.214	+			43855	TLWEAEVAR	9	67	537.7817199952935	1073.548887057387	2	537.7806396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TLWEAEVAR_	AluSz_dup101715|chr22:30660842-30661140:-|1.4532773959523846|0.4395440284853391|1.73|482.0|1|1|sense	58.78195531508484	0.22376836668196862	5				NaN	NaN	0	NaN	3309	3307	6617
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6619	22.301	NaN	4399.6	30	0	1413.9	0.106				-1	 	0	53	487.2522690395335	972.489985145867	2	487.25067138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3310	3307	6617
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6620	22.303	NaN	2176.7	30	0	354.72	0.106				-1	 	0	40	406.20154947484076	810.3885460164815	2	406.20050048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3311	3307	6617
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6621	22.305	NaN	3098.2	30	0	766.91	0.106			+	37160	SIVKLWEPQ	9	61	550.310088495479	1098.605624057758	2	550.3095092773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SIVKLWEPQ_	REV__ENSG00000184144|ENST00000331830|CNTN2;REV__ENST00000530117.5_1_1:205027631-205031234:+|nuORF	78.26377905018397	0.10505600812668463	5				NaN	NaN	0	NaN	3312	3307	6617
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6622	22.307	NaN	1933.6	30	0	345.51	0.106	+			18558	ISNLPTVKK	9	60	500.3143986849452	998.6142444366905	2	500.3128356933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ISNLPTVKK_	ENSG00000174156|ENST00000211122|GSTA3;ENSG00000182793|ENST00000370989|GSTA5;ENSG00000243955|ENST00000334575|GSTA1;ENSG00000244067|ENST00000493422|GSTA2;GSTA1|p.L198P|1|0.14|ENSG00000243955|chr6:52791934-52791934|A/G|missense_variant	58.2462437865262	0.22823408064396822	5				NaN	NaN	0	NaN	3313	3307	6617
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6623	22.309	NaN	1347	30	0	183.9	0.035			+	48010	VSQVAPPPAL	10	56	489.78458126404723	NaN	0	489.7846374511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VSQVAPPPAL_	REV__ENST00000262158.6_1_18:46476255-46476423:-|nuORF	56.72105179125745	0.2610545891966633	5				NaN	NaN	0	NaN	3314	3307	6617
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6624	22.309	NaN	3599.2	30	0	816.92	0.138	+			45674	VAAAESHPL	9	53	447.738408647539	893.462264361878	2	447.7373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VAAAESHPL_	ENST00000416120.1_1_6:64259201-64259360:-|nuORF;ENST00000489392.1_1_9:136216448-136216496:+|nuORF	106.41520541750704	0.03265588207292361	5				NaN	NaN	0	NaN	3315	3307	6617
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6637	22.339	NaN	12938	30	0	2814.9	0.214	+			38183	SQCGSLIGK	9	74	475.2429276086939	948.4713022841878	2	475.241943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SQC(Carbamidomethyl (C))GSLIGK_	ENSG00000090097|ENST00000461554|PCBP4;ENSG00000183570|ENST00000681687|PCBP3;ENSG00000197111|ENST00000546463|PCBP2;ENST00000468429.5_1_21:47321003-47359956:+|nuORF;ENST00000492809.5_1_3:51992079-51994784:-|nuORF;ENST00000497390.5_1_3:51992079-51994784:-|nuORF;ENST00000547717.1_1_12:53848575-53861193:+|nuORF;ENST00000548190.1_1_12:53849722-53854210:+|nuORF;nc|ENSG00000090097|P57723-2|PCBP4;nc|ENSG00000183570|P57721-2|PCBP3;nc|ENSG00000183570|P57721-3|PCBP3;nc|ENSG00000183570|P57721-4|PCBP3;nc|ENSG00000183570|P57721-5|PCBP3;nc|ENSG00000197111|Q15366-2|PCBP2;nc|ENSG00000197111|Q15366-4|PCBP2;nc|ENSG00000197111|Q15366-5|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;nc|ENSG00000197111|Q15366-7|PCBP2;nc|ENSG00000197111|Q15366-8|PCBP2;nc|ENSG00000197111|Q15366|PCBP2;PCBP2|p.T202Kfs*26|1|0.32|ENSG00000197111|chr12:53464773-53464773|C/-|frameshift_variant;PCBP4|p.G203Efs*11|1|0.1|ENSG00000090097|chr3:51959397-51959398|-/CTCT|frameshift_variant	114.85826248499774	0.024312442104607014	5				NaN	NaN	0	NaN	3325	3310	6636
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6638	22.343	NaN	4677.7	30	0	630.23	0.106	+			45241	TVQEHLIEK	9	68	548.804087691891	1095.593622450582	2	548.8037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVQEHLIEK_	ENSG00000082898|ENST00000401558|XPO1;ENST00000428210.5_1_2:61705957-61719950:-|nuORF	106.88024417677582	0.032181361622142884	5				NaN	NaN	0	NaN	3326	3310	6636
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6639	22.345	NaN	8731.2	30	0	807.76	0.106				-1	 	0	68	470.2854325615478	938.5563121898956	2	470.2845153808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3327	3310	6636
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6640	22.346	NaN	8322.5	30	0	3710.5	0.106	+			49357	VVSRSFKPD	9	57	345.52518282902656	1033.5537190872797	3	345.5247497558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVSRSFKPD_	ENSG00000185666|ENST00000358763|SYN3	27.882242232435846	0.5426732730940306	5				NaN	NaN	0	NaN	3328	3310	6636
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6641	22.348	NaN	4172.1	30	0	621.39	0.106				-1	 	0	51	435.2593553169293	868.5041577006587	2	435.2579650878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3329	3310	6636
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6642	22.35	NaN	3092.6	30	0	1345.6	0.106	+			21906	KRSPRKCAPG	10	42	367.2085927369732	1098.6039488111196	3	367.2082214355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KRSPRKCAPG_	ENST00000393913.7_1_2:75749606-75787936:-|nuORF;ENST00000410113.5_1_2:75753312-75787936:-|nuORF;ENST00000485891.1_1_2:75745306-75787936:-|nuORF	23.04248740728303	0.69165701907106	5				NaN	NaN	0	NaN	3330	3310	6636
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6643	22.352	NaN	1720.8	30	0	304.29	0.034			+	18011	IIGSTNNEI	9	57	480.75448620362283	959.4944194740457	2	480.7530212402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IIGSTNNEI_	REV__tr|U7SL02|U7SL02_FUSNUSsuA/THI5-likedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02015PE=4SV=1	52.936696900407355	0.27249468807391813	5				NaN	NaN	0	NaN	3331	3310	6636
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6658	22.383	NaN	12259	30	0	4723.2	0.214				-1	 	0	72	362.7596814049383	723.5048098766766	2	362.75885009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3343	3313	6657
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6659	22.387	NaN	3834.8	30	0	344.72	0.106	+			38753	SSLQEVYHK	9	60	545.7801926484511	NaN	0	545.7799682617188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSLQEVYHK_	ENSG00000143106|ENST00000271308|PSMA5;nc|ENSG00000143106|P28066-2|PSMA5	88.17693792209575	0.04527150213038833	5				NaN	NaN	0	NaN	3344	3313	6657
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6660	22.389	NaN	2194.5	30	0	154.65	0.106			+	10764	FAGAKGLLTAP	11	59	523.3041595361342	1044.5937661390683	2	523.3040161132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FAGAKGLLTAP_	REV__ENSG00000105245|ENST00000252891|NUMBL	45.97224482568171	0.4762245054624163	5				NaN	NaN	0	NaN	3345	3313	6657
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6661	22.391	NaN	2324.9	30	0	343.86	0.106			+	1566	AGGLPNVK	8	53	378.22480496373	754.43505699426	2	378.22406005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AGGLPNVK_	REV__ENSG00000060971|ENST00000333167|ACAA1;REV__ENST00000411549.5_1_3:38164540-38167863:-|nuORF;REV__ENST00000469559.5_1_3:38167054-38167382:-|nuORF;REV__ENST00000469600.1_1_3:38164540-38167382:-|nuORF;REV__nc|ENSG00000060971|P09110-2|ACAA1	35.200714571348534	0.6875396545722289	5				NaN	NaN	0	NaN	3346	3313	6657
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6662	22.393	NaN	1523.8	30	0	151.04	0.106	+			17768	IESKHEVTI	9	52	528.2908210798657	NaN	0	528.2905883789062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IESKHEVTI_	ENSG00000186591|ENST00000355621|UBE2H;ENST00000496698.5_1_7:129519475-129591134:-|nuORF;nc|ENSG00000186591|P62256-2|UBE2H	56.43379154798735	0.16452882468284893	5				NaN	NaN	0	NaN	3347	3313	6657
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6663	22.394	NaN	2692.8	30	0	302.97	0.036				-1	KECLVMRD	8	62	533.7550407310447	NaN	0	533.7544555664062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),Oxidation (M)	_KEC(Carbamidomethyl (C))LVM(Oxidation (M))RD_	ENSG00000135097|ENST00000257552|MSI1;MSI1|p.P296Lfs*57|1|0.11|ENSG00000135097|chr12:120346295-120346295|G/-|frameshift_variant	82.24051045832904	1.7418937515398478	5				NaN	NaN	0	NaN	3348	3313	6657
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6664	22.395	NaN	2625.3	30	0	697.51	0.139			+	23633	LAQKREEA	8	54	472.76258728605194	943.5106216389039	2	472.7611389160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LAQKREEA_	REV__nc|ENSG00000129195|Q9BSJ6|PIMREG	58.78195531508484	0.5138399468736706	5				NaN	NaN	0	NaN	3349	3313	6657
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6680	22.43	NaN	14333	30	0	1792.8	0.214	+			3386	ASQCGSLIGK	10	74	510.7615558227683	1019.5085587123366	2	510.76092529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_ASQC(Carbamidomethyl (C))GSLIGK_	ENSG00000090097|ENST00000461554|PCBP4;ENSG00000183570|ENST00000681687|PCBP3;ENSG00000197111|ENST00000546463|PCBP2;ENST00000468429.5_1_21:47321003-47359956:+|nuORF;ENST00000492809.5_1_3:51992079-51994784:-|nuORF;ENST00000497390.5_1_3:51992079-51994784:-|nuORF;ENST00000547717.1_1_12:53848575-53861193:+|nuORF;ENST00000548190.1_1_12:53849722-53854210:+|nuORF;nc|ENSG00000090097|P57723-2|PCBP4;nc|ENSG00000183570|P57721-2|PCBP3;nc|ENSG00000183570|P57721-3|PCBP3;nc|ENSG00000183570|P57721-4|PCBP3;nc|ENSG00000183570|P57721-5|PCBP3;nc|ENSG00000197111|Q15366-2|PCBP2;nc|ENSG00000197111|Q15366-4|PCBP2;nc|ENSG00000197111|Q15366-5|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;nc|ENSG00000197111|Q15366-7|PCBP2;nc|ENSG00000197111|Q15366-8|PCBP2;nc|ENSG00000197111|Q15366|PCBP2;PCBP2|p.T202Kfs*26|1|0.32|ENSG00000197111|chr12:53464773-53464773|C/-|frameshift_variant;PCBP4|p.G203Efs*11|1|0.1|ENSG00000090097|chr3:51959397-51959398|-/CTCT|frameshift_variant	117.7056744995986	0.030570130731382417	5				NaN	NaN	0	NaN	3362	3316	6679
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6681	22.434	NaN	16769	30	0	7233.3	0.106	+			47033	VLCPPPVKK	9	63	327.53707385228347	979.5893921570505	3	327.5364685058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VLCPPPVKK_	ENSG00000136238|ENST00000348035|RAC1;ENSG00000169750|ENST00000306897|RAC3;ENST00000419413.1_1_X:136523419-136523611:-|nuORF;ENST00000488373.5_1_7:6415539-6442074:+|nuORF;nc|ENSG00000136238|P63000-2|RAC1	47.657333605630114	0.33044192980041115	5				NaN	NaN	0	NaN	3363	3316	6679
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6682	22.436	NaN	9864.5	30	0	2494.4	0.106	+			50241	WPGRGTRK	8	55	479.27288173806426	956.5312105429285	2	479.2716064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_WPGRGTRK_	ENST00000436587.6_1_7:7283538-7283649:+|nuORF	74.25504064058377	0.37144338840759816	5				NaN	NaN	0	NaN	3364	3316	6679
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6683	22.437	NaN	2174.7	30	0	933.84	0.106			+	25693	LRKLHELVE	9	37	379.5643005371094	NaN	0	379.5643005371094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LRKLHELVE_	REV__ENSG00000077935|ENST00000357450|SMC1B;REV__nc|ENSG00000077935|Q8NDV3-2|SMC1B	31.529811441608018	0.3183796599642538	5				NaN	NaN	0	NaN	3365	3316	6679
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6684	22.439	NaN	8052.7	30	0	3962.2	0.106				-1	 	0	63	498.26236213804464	994.5101713428893	2	498.26153564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3366	3316	6679
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6685	22.441	NaN	3125	30	0	573.69	0.038			+	50129	WIALTEKQLE	10	75	615.8392493727099	1229.6639458122197	2	615.8381958007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_WIALTEKQLE_	REV__ENSG00000198216|ENST00000367573|CACNA1E;REV__nc|ENSG00000198216|Q15878-2|CACNA1E;REV__nc|ENSG00000198216|Q15878-3|CACNA1E	56.632244143249146	0.3964695498866976	5				NaN	NaN	0	NaN	3367	3316	6679
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6686	22.442	NaN	1621.6	30	0	120.94	0.142	+			19964	KEGPEGANL	9	46	457.73338869049115	913.4522244477823	2	457.73260498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KEGPEGANL_	ENSG00000048740|ENST00000633077|CELF2;ENSG00000149187|ENST00000687097|CELF1;nc|ENSG00000048740|O95319-2|CELF2;nc|ENSG00000048740|O95319-3|CELF2;nc|ENSG00000048740|O95319-4|CELF2;nc|ENSG00000048740|O95319-5|CELF2;nc|ENSG00000048740|O95319|CELF2;nc|ENSG00000149187|Q92879-2|CELF1;nc|ENSG00000149187|Q92879-3|CELF1;nc|ENSG00000149187|Q92879-4|CELF1;nc|ENSG00000149187|Q92879-5|CELF1;nc|ENSG00000149187|Q92879-6|CELF1;nc|ENSG00000149187|Q92879|CELF1	43.650786325866115	0.37743712540499297	5				NaN	NaN	0	NaN	3368	3316	6679
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6704	22.481	NaN	12934	30	0	3431.1	0.214				-1	 	0	63	373.21052043227706	1116.6097318970312	3	373.2097473144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3383	3319	6703
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6705	22.485	NaN	6913.8	30	0	681.14	0.106				-1	 	0	68	494.25992209429563	986.5052912553913	2	494.25872802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3384	3319	6703
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6706	22.487	NaN	5716.8	30	0	1083.2	0.106	+			16900	HPIQTQAQY	9	68	543.2732679825353	1084.5319830318706	2	543.2725830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HPIQTQAQY_	ENSG00000161813|ENST00000398473|LARP4;ENST00000521120.1_1_12:50835423-50848201:+|nuORF;LARP4|p.N373Ifs*3|1|0.26|ENSG00000161813|chr12:50454408-50454408|A/-|frameshift_variant;nc|ENSG00000161813|Q71RC2-2|LARP4;nc|ENSG00000161813|Q71RC2-3|LARP4;nc|ENSG00000161813|Q71RC2-4|LARP4;nc|ENSG00000161813|Q71RC2-6|LARP4;nc|ENSG00000161813|Q71RC2-7|LARP4	75.04331003522576	0.118981335847003	5				NaN	NaN	0	NaN	3385	3319	6703
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6707	22.488	NaN	2621.6	30	0	826.51	0.106				-1	 	0	53	559.3120223267409	1116.6094917202818	2	559.3101196289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3386	3319	6703
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6708	22.49	NaN	2394.7	30	0	571.4	0.106	+			31190	QGPPGTGKTY	10	54	503.254126607922	1004.493700282644	2	503.25347900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QGPPGTGKTY_	ENSG00000124201|ENST00000396105|ZNFX1;nc|ENSG00000124201|Q9P2E3-2|ZNFX1;ZNFX1|p.R900Efs*2|2|0.38|ENSG00000124201|chr20:49255914-49255914|T/-|frameshift_variant	42.33807565288922	0.5276008846745733	5				NaN	NaN	0	NaN	3387	3319	6703
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6709	22.492	NaN	2521.6	30	0	774.63	0.032	+			12294	GCGGPLVGK	9	51	394.210826100943	786.407099268686	2	394.210205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GCGGPLVGK_	ENST00000331889.10_1_3:32726697-32726778:+|nuORF	57.81127852772723	0.2318599694398087	5				NaN	NaN	0	NaN	3388	3319	6703
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6710	22.493	NaN	1810.6	30	0	198.01	0.139	+			37276	SLAGRVKHI	9	60	490.8030728440491	979.5915927548982	2	490.8016357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SLAGRVKHI_	ENSG00000166046|ENST00000299045|TCP11L2;nc|ENSG00000166046|Q8N4U5-2|TCP11L2	29.14955571784316	0.5308295550522326	5				NaN	NaN	0	NaN	3389	3319	6703
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6723	22.522	NaN	29912	30	0	11615	0.214				-1	 	0	55	367.2248786318379	1098.6528064957138	3	367.2241516113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3399	3322	6722
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6724	22.526	NaN	11759	30	0	2812.6	0.106	+			15045	GTNPGIITK	9	64	450.76197526862154	899.5093976040431	2	450.76068115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTNPGIITK_	ENSG00000136247|ENST00000335965|ZDHHC4;ENST00000474097.5_1_7:6620192-6623202:+|nuORF	117.5257442709337	0.022697614825424036	5				NaN	NaN	0	NaN	3400	3322	6722
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6725	22.528	NaN	8852.8	30	0	2213.4	0.106	+			15018	GTNFTKLEK	9	70	519.2856567511694	1036.5567605691388	2	519.2849731445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTNFTKLEK_	ENSG00000115514|ENST00000264255|TXNDC9	92.23892857375223	0.05855307001735979	5				NaN	NaN	0	NaN	3401	3322	6722
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6726	22.53	NaN	4205.5	30	0	498.92	0.106	+			39926	STMDLVKSK	9	64	504.7738309979529	1007.5331090627059	2	504.77294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STMDLVKSK_	ENSG00000107625|ENST00000373585|DDX50	101.45984612302182	0.0377122763612125	5				NaN	NaN	0	NaN	3402	3322	6722
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6727	22.531	NaN	6997	30	0	1151.6	0.106			+	47132	VLPLEYKVI	9	73	537.3331303781538	1072.6517078231075	2	537.3320922851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VLPLEYKVI_	REV__ENSG00000134294|ENST00000256689|SLC38A2;REV__nc|ENSG00000134294|Q96QD8-2|SLC38A2;REV__SLC38A2|p.F332Cfs*28|1|0.09|ENSG00000134294|chr12:46363785-46363786|-/CAAAAACAAAAAC|frameshift_variant	55.50420428727701	0.2510918378945873	5				NaN	NaN	0	NaN	3403	3322	6722
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6728	22.533	NaN	2890.4	30	0	667.14	0.106			+	33471	RISRWRSKY	9	71	626.3577728684969	1250.7009928037937	2	626.3564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RISRWRSKY_	REV__ENSG00000164073|ENST00000641686|MFSD8;REV__ENST00000505284.5_1_4:128842916-128886288:-|nuORF;REV__ENST00000515130.5_1_4:128842916-128886236:-|nuORF;REV__MFSD8|p.G197Vfs*2|1|0.31|ENSG00000164073|chr4:127939963-127939963|T/-|frameshift_variant	76.16968421966216	0.11411088698345859	5				NaN	NaN	0	NaN	3404	3322	6722
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6729	22.535	NaN	2668	30	0	328.77	0.033	+			19410	KAPGTNVAM	9	55	444.7336194946563	NaN	0	444.733642578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KAPGTNVAM_	ENSG00000153201|ENST00000283195|RANBP2;RANBP2|p.C2737Vfs*35|1|0.18|ENSG00000153201|chr2:108772957-108772957|T/-|frameshift_variant;RANBP2|p.F3068Lfs*10|1|0.06|ENSG00000153201|chr2:108782692-108782692|T/-|frameshift_variant;RANBP2|p.H3114Sfs*18|1|0.33|ENSG00000153201|chr2:108782827-108782828|-/T|frameshift_variant;RANBP2|p.K1989Nfs*9|1|0.05|ENSG00000153201|chr2:108766505-108766506|-/TATCCTG|frameshift_variant;RANBP2|p.K2576Nfs*63|2|0.22|ENSG00000153201|chr2:108768262-108768262|A/-|frameshift_variant;RANBP2|p.S1486Rfs*51|1|0.05|ENSG00000153201|chr2:108764996-108764997|-/ATTTTGTATTC|frameshift_variant	72.87924865735499	0.09578366712754152	5				NaN	NaN	0	NaN	3405	3322	6722
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6745	22.568	NaN	9705.1	30	0	2263.5	0.215			+	18799	ITSHHKKNEI	10	66	402.8905050698005	1205.6496858096016	3	402.8897399902344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ITSHHKKNEI_	REV__ENSG00000163125|ENST00000369068|RPRD2;REV__nc|ENSG00000163125|Q5VT52-2|RPRD2;REV__nc|ENSG00000163125|Q5VT52-3|RPRD2;REV__nc|ENSG00000163125|Q5VT52-4|RPRD2;REV__nc|ENSG00000163125|Q5VT52-5|RPRD2;REV__RPRD2|p.G1389Efs*24|1|0.39|ENSG00000163125|chr1:150473110-150473110|G/-|frameshift_variant;REV__RPRD2|p.K249Sfs*6|1|0.36|ENSG00000163125|chr1:150446274-150446274|C/-|frameshift_variant;REV__RPRD2|p.L1399Wfs*14|2|0.26|ENSG00000163125|chr1:150473136-150473136|C/-|frameshift_variant;REV__RPRD2|p.P1275Lfs*138|1|0.15|ENSG00000163125|chr1:150472768-150472768|C/-|frameshift_variant;REV__RPRD2|p.P733Hfs*4|1|0.43|ENSG00000163125|chr1:150471145-150471146|CC/-|frameshift_variant;REV__RPRD2|p.P772Lfs*42|2|0.19|ENSG00000163125|chr1:150471259-150471259|C/-|frameshift_variant;REV__RPRD2|p.T1353Pfs*60|1|0.13|ENSG00000163125|chr1:150473001-150473001|C/-|frameshift_variant	45.02220120713402	0.5028680121232791	5				NaN	NaN	0	NaN	3418	3325	6744
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6746	22.572	NaN	3915.5	30	0	338.64	0.106			+	31151	QGIDRIKK	8	62	479.2966604602946	956.5787679873893	2	479.2953186035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QGIDRIKK_	REV__tr|U7SPX2|U7SPX2_FUSNUAminotransferaseclassVdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01650PE=3SV=1	90.77665401227738	0.27511901818546464	5				NaN	NaN	0	NaN	3419	3325	6744
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6747	22.574	NaN	4098.7	30	0	491.65	0.106			+	-1	PCQTSEVLMR	10	73	590.2793923957042	1178.5442318582084	2	590.278564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_PCQTSEVLM(Oxidation (M))R_	REV__FAM178B|p.K398Sfs*35|1|0.13|ENSG00000168754|chr2:96960426-96960426|T/-|frameshift_variant	56.43379154798735	0.3982744522255666	5				NaN	NaN	0	NaN	3420	3325	6744
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6748	22.576	NaN	2921.1	30	0	541.89	0.106	+			6486	AVYSHVIQK	9	55	522.7967006555675	1043.578848377935	2	522.7957763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVYSHVIQK_	ENSG00000135094|ENST00000257549|SDS;SDS|p.G305Afs*18|1|0.17|ENSG00000135094|chr12:113393014-113393014|C/-|frameshift_variant	60.11826168202944	0.21262886028301267	5				NaN	NaN	0	NaN	3421	3325	6744
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6749	22.578	NaN	3290.7	30	0	1449.2	0.106			+	14890	GTLSKLAYGQ	10	37	346.5262939447819	1036.5570524345458	3	346.5256652832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTLSKLAYGQ_	REV__ENSG00000127481|ENST00000375254|UBR4;REV__nc|ENSG00000127481|Q5T4S7-2|UBR4;REV__nc|ENSG00000127481|Q5T4S7-3|UBR4;REV__nc|ENSG00000127481|Q5T4S7-4|UBR4;REV__UBR4|p.C4515Wfs*2|1|0.06|ENSG00000127481|chr1:19095626-19095626|G/-|frameshift_variant;REV__UBR4|p.L4771Cfs*7|1|0.25|ENSG00000127481|chr1:19088878-19088878|G/-|frameshift_variant	28.081489160057373	0.6505064946289502	5				NaN	NaN	0	NaN	3422	3325	6744
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6750	22.579	NaN	1715.8	30	0	148.01	0.034	+			20843	KIIQVGNR	8	57	464.2911784113632	926.5678038895264	2	464.28997802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KIIQVGNR_	ENSG00000263001|ENST00000573035|GTF2I;ENST00000544802.5_1_7:72593260-72619478:+|nuORF;nc|ENSG00000263001|P78347-2|GTF2I;nc|ENSG00000263001|P78347-3|GTF2I;nc|ENSG00000263001|P78347-4|GTF2I	31.954861631926434	0.7126016770032289	5				NaN	NaN	0	NaN	3423	3325	6744
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6751	22.58	NaN	4540	30	0	691.45	0.141	+			16925	HPLSDHEATL	10	64	560.2757862998611	1118.5370196665222	2	560.2752685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HPLSDHEATL_	ENSG00000204525|ENST00000376228|HLA-C;ENST00000487245.5_1_6:31236948-31239147:-|nuORF;HLA-C|p.A269Gfs*66|1|0.07|ENSG00000204525|chr6:31270299-31270300|-/C|frameshift_variant;nc|ENSG00000204525|P10321-2|HLA-C	74.25504064058377	0.24255678544297835	5				NaN	NaN	0	NaN	3424	3325	6744
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6765	22.612	NaN	8552	30	0	1986.7	0.214	+			40948	SVFTSVRQK	9	69	526.2994141444025	1050.5842753556049	2	526.298583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVFTSVRQK_	ENSG00000127616|ENST00000344626|SMARCA4;ENST00000585799.5_1_19:11132109-11172489:+|nuORF;ENST00000591595.5_1_19:11130023-11172489:+|nuORF;ENST00000592604.5_1_19:11123597-11172489:+|nuORF;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;nc|ENSG00000127616|P51532-5|SMARCA4	107.00750918261382	0.032051501805654005	5				NaN	NaN	0	NaN	3435	3328	6764
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6766	22.615	NaN	10003	30	0	1418.3	0.106			+	33992	RSGLTLNMRTE	11	81	647.332441310286	1292.6503296873718	2	647.3304443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_RSGLTLNM(Oxidation (M))RTE_	REV__ENSG00000060709|ENST00000690449|RIMBP2;REV__nc|ENSG00000060709|O15034-2|RIMBP2;REV__nc|ENSG00000060709|O15034|RIMBP2;REV__RIMBP2|p.G774Efs*16|1|0.62|ENSG00000060709|chr12:130428219-130428219|C/-|frameshift_variant	76.16968421966216	0.18430501143391895	5				NaN	NaN	0	NaN	3436	3328	6764
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6767	22.617	NaN	4532.1	30	0	1191	0.106				-1	 	0	53	384.7729108975081	767.5312688618162	2	384.7718811035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3437	3328	6764
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6768	22.619	NaN	6789.6	30	0	546.69	0.106				-1	 	0	69	508.8038046402885	1015.593056347377	2	508.80291748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3438	3328	6764
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6769	22.621	NaN	3244.3	30	0	656.55	0.106	+			41167	SVKNKIFTA	9	43	336.5342498906769	NaN	0	336.5341796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVKNKIFTA_	ENSG00000126858|ENST00000545287|RHOT1;nc|ENSG00000126858|Q8IXI2-3|RHOT1;nc|ENSG00000126858|Q8IXI2-5|RHOT1	29.14955571784316	0.3303970763161698	5				NaN	NaN	0	NaN	3439	3328	6764
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6770	22.623	NaN	3143.4	30	0	525.63	0.037	+			40933	SVFSDKLHSK	10	64	574.3099932828447	1146.6054336324894	2	574.3093872070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVFSDKLHSK_	ENSG00000187257|ENST00000334955|RSBN1L;nc|ENSG00000187257|Q6PCB5-2|RSBN1L;PTPN12-RSBN1L|1|fusion;PTPN12-RSBN1L|2|fusion;PTPN12-RSBN1L|3|fusion;PTPN12-RSBN1L|4|fusion;PTPN12-RSBN1L|5|fusion;PTPN12-RSBN1L|6|fusion;PTPN12-RSBN1L|7|fusion;PTPN12-RSBN1L|8|fusion	42.242577148874844	0.5284808555555522	5				NaN	NaN	0	NaN	3440	3328	6764
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6771	22.623	NaN	2643.8	30	0	330.13	0.14				-1	 	0	52	487.2522690395335	972.489985145867	2	487.7517395019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3441	3328	6764
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6787	22.658	NaN	5780	30	0	997.66	0.214				-1	 	0	68	469.751554960979	937.488556988758	2	469.7503967285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3454	3331	6786
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6788	22.662	NaN	3052.9	30	0	256.3	0.106	+			38933	SSQNAFMQK	9	64	520.7461547225674	1039.4777565119348	2	520.7449951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSQNAFMQK_	ENST00000533415.5_1_17:45247369-45258963:-|nuORF	98.58198989935565	0.04066992115528678	5				NaN	NaN	0	NaN	3455	3331	6786
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6789	22.664	NaN	2480	30	0	488.3	0.106				-1	 	0	51	501.75995859279215	1001.5053642523843	2	501.7587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3456	3331	6786
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6790	22.666	NaN	4869.2	30	0	1136.5	0.106	+			15417	GTYHGMTLK	9	65	504.2535645297827	1006.4925761263654	2	504.25201416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTYHGMTLK_	ENSG00000134371|ENST00000367435|CDC73	54.776311868738084	0.25715957988447635	5				NaN	NaN	0	NaN	3457	3331	6786
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6791	22.667	NaN	2134.5	30	0	365.71	0.106			+	-1	STAMGYGY	8	59	433.17294469094657	864.3313364486932	2	433.171630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_STAM(Oxidation (M))GYGY_	REV__ENSG00000011243|ENST00000397410|AKAP8L;REV__ENST00000593845.5_1_19:15510111-15529746:-|nuORF;REV__ENST00000594893.5_1_19:15511079-15529746:-|nuORF;REV__ENST00000601147.2_1_19:15514284-15529746:-|nuORF	28.2542754592877	0.7411748056684583	5				NaN	NaN	0	NaN	3458	3331	6786
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6792	22.669	NaN	2139.6	30	0	370.28	0.036	+			21654	KPVHTPGNLP	10	53	530.3016646158743	1058.5887762985485	2	530.3013916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KPVHTPGNLP_	ENST00000304032.12_1_2:237036554-237036818:+|nuORF	45.97224482568171	0.49411383603842696	5				NaN	NaN	0	NaN	3459	3331	6786
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6793	22.67	NaN	1758.1	30	0	382.73	0.144			+	45153	TVLSDNRVL	9	45	339.52961717981384	1015.5670221396415	3	339.53759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TVLSDNRVL_	REV__ENSG00000168958|ENST00000304593|MFF	32.81241826257853	0.4965981579233955	5				NaN	NaN	0	NaN	3460	3331	6786
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6806	22.7	NaN	19602	30	0	4055.3	0.214			+	17216	HVHLVSSR	8	68	467.7646157251817	933.5146785171635	2	467.7635803222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HVHLVSSR_	REV__ENSG00000149050|ENST00000278314|ZNF214	110.33723246496265	0.24497573416425186	5				NaN	NaN	0	NaN	3470	3334	6805
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6807	22.703	NaN	4025.4	30	0	689.33	0.106			+	40100	STNVTSGTIQ	10	59	504.2535645297827	1006.4925761263654	2	504.2524719238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STNVTSGTIQ_	REV__nc|ENSG00000205277|Q9UKN1|MUC12	60.11826168202944	0.36476464221954025	5				NaN	NaN	0	NaN	3471	3334	6805
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6808	22.705	NaN	5658.6	30	0	2085.6	0.106	+			10208	ETFSGVYKK	9	66	529.780520593306	1057.546488253412	2	529.7797241210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ETFSGVYKK_	ENSG00000171863|ENST00000645674|RPS7;ENST00000444127.1_1_1:68708159-68708657:-|nuORF;ENST00000484240.1_1_17:44798950-44799232:-|nuORF	69.6276240434122	0.14239879520340665	5				NaN	NaN	0	NaN	3472	3334	6805
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6809	22.707	NaN	3405	30	0	353.24	0.106	+			12485	GEDTGRVHL	9	65	492.2501463330317	982.4857397328634	2	492.2485656738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEDTGRVHL_	ENSG00000109686|ENST00000604030|SH3D19;ENST00000478503.6_1_4:152043245-152086876:-|nuORF;LRBA-SH3D19|2|fusion;LRBA-SH3D19|3|fusion;nc|ENSG00000109686|Q5HYK7-2|SH3D19;nc|ENSG00000109686|Q5HYK7-3|SH3D19;nc|ENSG00000109686|Q5HYK7-4|SH3D19;nc|ENSG00000109686|Q5HYK7-5|SH3D19;nc|ENSG00000109686|Q5HYK7|SH3D19	44.377184641726394	0.36891676396732553	5				NaN	NaN	0	NaN	3473	3334	6805
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6810	22.709	NaN	2515.6	30	0	454.43	0.106				-1	 	0	52	477.28108827463666	952.5476236160733	2	477.27978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3474	3334	6805
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6811	22.711	NaN	2646.6	30	0	1007.6	0.106	+			30024	PPPSLSSHGS	10	41	483.23862978331385	964.4627066334277	2	483.2371520996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PPPSLSSHGS_	ENSG00000055917|ENST00000361078|PUM2;ENSG00000134644|ENST00000426105|PUM1;nc|ENSG00000055917|Q8TB72-4|PUM2;nc|ENSG00000055917|Q8TB72|PUM2;nc|ENSG00000134644|Q14671-2|PUM1;nc|ENSG00000134644|Q14671-4|PUM1;nc|ENSG00000134644|Q14671|PUM1	27.882242232435846	0.6521336255503853	5				NaN	NaN	0	NaN	3475	3334	6805
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6812	22.712	NaN	874.49	30	0	151.99	0.037			+	-1	YYMPKHLR	8	43	562.2881469726562	NaN	0	562.2881469726562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_YYM(Oxidation (M))PKHLR_	REV__ENSG00000176900|ENST00000322049|OR51T1	28.2542754592877	1.7418937515398478	5				NaN	NaN	0	NaN	3476	3334	6805
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6827	22.744	NaN	16615	30	0	3199.4	0.214	+			8201	EADHITTDV	9	70	500.73413788606814	999.4537228389363	2	500.73260498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EADHITTDV_	ENSG00000109452|ENST00000262992|INPP4B;INPP4B|p.K530Efs*15|1|0.23|ENSG00000109452|chr4:142145972-142145973|-/C|frameshift_variant	87.75429964447693	0.0711966946989736	5				NaN	NaN	0	NaN	3488	3337	6826
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6828	22.747	NaN	4946.8	30	0	673.9	0.106				-1	 	0	65	488.7671800737131	975.5198072142263	2	488.7657165527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3489	3337	6826
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6829	22.749	NaN	12407	30	0	6220.4	0.106				-1	KMVQEDEKI	9	51	379.19359451295674	1134.5589541390702	3	379.1927490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_KM(Oxidation (M))VQEDEKI_	ENSG00000131089|ENST00000671741|ARHGEF9;nc|ENSG00000131089|O43307-2|ARHGEF9;nc|ENSG00000131089|O43307-3|ARHGEF9;nc|ENSG00000131089|O43307|ARHGEF9	33.921630207806714	0.48623198279849766	5				NaN	NaN	0	NaN	3490	3337	6826
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6830	22.751	NaN	4917.6	30	0	2872.5	0.106	+			32615	QYNPHVHQL	9	52	568.2868914558147	1134.5592299784294	2	568.2861938476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QYNPHVHQL_	DLG5|p.F1661Ifs*9|1|0.12|ENSG00000151208|chr10:77805849-77805850|-/C|frameshift_variant;ENSG00000151208|ENST00000372391|DLG5;ENST00000459739.5_1_10:79567604-79581271:-|nuORF;ENST00000463362.5_1_10:79552200-79579794:-|nuORF;ENST00000475613.6_1_10:79552200-79579275:-|nuORF;nc|ENSG00000151208|Q8TDM6-2|DLG5;nc|ENSG00000151208|Q8TDM6-4|DLG5;nc|ENSG00000151208|Q8TDM6-5|DLG5	104.0567914643314	0.03506238181059741	5				NaN	NaN	0	NaN	3491	3337	6826
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6831	22.753	NaN	1720	30	0	155.96	0.106	+			23202	KYAGQDIVF	9	58	520.774845331417	NaN	0	520.7747802734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KYAGQDIVF_	ENSG00000197892|ENST00000524189|KIF13B;KIF13B|p.K1288Rfs*13|1|0.34|ENSG00000197892|chr8:29113530-29113530|T/-|frameshift_variant	40.77816245573522	0.2702456086868081	5				NaN	NaN	0	NaN	3492	3337	6826
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6832	22.755	NaN	4492.7	30	0	2223.5	0.038				-1	KIRKLGPLQC	10	61	404.9126884528472	1211.7162359587417	3	404.9117126464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_KIRKLGPLQC(Carbamidomethyl (C))_	ENST00000377705.5_1_1:6585202-6585712:-|nuORF	21.68575002086885	0.7027366847906487	5				NaN	NaN	0	NaN	3493	3337	6826
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6833	22.756	NaN	2047.8	30	0	481.37	0.136				-1	 	0	44	362.7596814049383	723.5048098766766	2	362.7588195800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3494	3337	6826
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6848	22.788	NaN	5723.1	30	0	2545.6	0.214				-1	 	0	49	464.2491450741995	926.483737215199	2	464.24798583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3506	3340	6847
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6849	22.792	NaN	2795.6	30	0	326.57	0.106	+			36078	SEKDHMVTM	9	67	539.2393017454344	1076.4640505576688	2	539.2388916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEKDHMVTM_	ENSG00000130826|ENST00000369550|DKC1;nc|ENSG00000130826|O60832-2|DKC1	54.722347961057174	0.257609425301511	5				NaN	NaN	0	NaN	3507	3340	6847
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6850	22.794	NaN	3191	30	0	515.1	0.106			+	32463	QVLGRSLPAPQ	11	48	389.2286893971842	1164.6642387917527	3	389.227783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QVLGRSLPAPQ_	REV__ENST00000521104.1_1_6:56504020-56557947:-|nuORF;REV__nc|ENSG00000151914|Q03001-13|DST	36.31764250033197	0.6083289427130232	5				NaN	NaN	0	NaN	3508	3340	6847
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6851	22.795	NaN	2524.2	30	0	561.58	0.106	+			46018	VAVPAGGWL	9	46	435.2464882696018	868.4784236060036	2	435.2451477050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VAVPAGGWL_	ENST00000543067.5_1_X:21392776-21393022:+|nuORF	29.841539824830324	0.5243625958137083	5				NaN	NaN	0	NaN	3509	3340	6847
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6852	22.797	NaN	1720.2	30	0	242.16	0.106			+	11566	FPLYMQMVQ	9	53	578.7812991950234	1155.5480454568467	2	579.2822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FPLYMQMVQ_	REV__ENST00000497003.5_1_2:178552959-178791632:-|nuORF	40.5726180659479	0.4135428067754104	5				NaN	NaN	0	NaN	3510	3340	6847
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6853	22.799	NaN	1826	30	0	117.35	0.036			+	-1	QIHCRHSY	8	63	550.7550079267663	1099.4954629203326	2	550.7548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_QIHC(Carbamidomethyl (C))RHSY_	REV__ENST00000396516.6_1_16:11873200-11876320:-|nuORF	45.9519527083369	0.6193794311207887	5				NaN	NaN	0	NaN	3511	3340	6847
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6854	22.8	NaN	989.6	30	0	117.12	0.143				-1	LVISFHDFIS	10	44	610.3223266601562	NaN	0	610.3223266601562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LVISFHDFIS_	ENST00000303575.8_1_14:75601016-75601088:-|nuORF	20.83715455343099	0.4201028297492154	5				NaN	NaN	0	NaN	3512	3340	6847
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6868	22.831	NaN	13790	30	0	2452	0.214	+			4882	ATQCGSLIGK	10	67	517.7693925749268	1033.5242322166534	2	517.7686157226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_ATQC(Carbamidomethyl (C))GSLIGK_	ENSG00000169564|ENST00000303577|PCBP1	154.0112374973812	0.007783311651969589	5				NaN	NaN	0	NaN	3523	3343	6867
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6869	22.835	NaN	4617.3	30	0	2372.2	0.106			+	24998	LLERTMAPN	9	61	530.7756100329692	1059.5366671327383	2	530.7747192382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LLERTM(Oxidation (M))APN_	REV__ENSG00000102401|ENST00000471229|ARMCX3	54.776311868738084	0.25715957988447635	5				NaN	NaN	0	NaN	3524	3343	6867
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6870	22.837	NaN	3590.9	30	0	664.81	0.106				-1	 	0	54	505.7494767287772	1009.4844005243544	2	505.7484436035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3525	3343	6867
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6871	22.838	NaN	6647.9	30	0	1678.1	0.106				-1	 	0	49	373.21052043227706	1116.6097318970312	3	373.54412841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3526	3343	6867
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6872	22.84	NaN	4035.5	30	0	1700.1	0.106			+	30333	PTSPFVHI	8	56	449.2443898219585	896.4742267107171	2	449.2428283691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PTSPFVHI_	REV__ENSG00000067606|ENST00000378567|PRKCZ;REV__ENST00000479566.5_1_1:1986898-2002796:+|nuORF;REV__PRKCZ|p.S262Afs*10|1|0.39|ENSG00000067606|chr1:2150886-2150886|A/-|frameshift_variant	62.97842346883844	0.4722955155785405	5				NaN	NaN	0	NaN	3527	3343	6867
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6873	22.842	NaN	5844.9	30	0	1950.6	0.036				-1	 	0	49	346.55435755543823	1036.6412432665147	3	346.5534973144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3528	3343	6867
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6874	22.843	NaN	2472.1	30	0	881.88	0.141	+			44246	TRWVRPRV	8	52	535.3229443684007	1068.6313358036014	2	535.3222045898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TRWVRPRV_	ENST00000496425.1_1_20:62373927-62374363:+|nuORF	27.882242232435846	0.7440473649773525	5				NaN	NaN	0	NaN	3529	3343	6867
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6889	22.876	NaN	5480.9	30	0	1365.6	0.214				-1	 	0	58	477.7856245050202	953.5566960768405	2	477.7843933105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3541	3346	6888
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6890	22.88	NaN	5052.9	30	0	1235.6	0.106				-1	 	0	59	449.2802928736166	896.5460328140332	2	449.2789611816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3542	3346	6888
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6891	22.882	NaN	23679	30	0	3103	0.106				-1	 	0	82	336.52278823069685	1006.5465352922906	3	336.5220947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3543	3346	6888
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6892	22.883	NaN	1698.4	30	0	323.37	0.106	+			4804	ATNSSLIK	8	41	417.24085651761163	832.4671601020233	2	417.2400207519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATNSSLIK_	ENSG00000198569|ENST00000673835|SLC34A3	36.446750945000026	0.6783611724927969	5				NaN	NaN	0	NaN	3544	3346	6888
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6893	22.885	NaN	1669.1	30	0	182.02	0.106	+			39209	STADLIRCK	9	61	532.2821655273438	NaN	0	532.2821655273438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_STADLIRC(Carbamidomethyl (C))K_	ENSG00000001497|ENST00000374811|LAS1L;nc|ENSG00000001497|Q9Y4W2-2|LAS1L;nc|ENSG00000001497|Q9Y4W2-4|LAS1L	58.22992032128504	0.15686832049467786	5				NaN	NaN	0	NaN	3545	3346	6888
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6894	22.887	NaN	1597.5	30	0	209.5	0.035	+			4594	ATLGSGNLRQ	10	59	508.777587890625	NaN	0	508.777587890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATLGSGNLRQ_	ENSG00000114978|ENST00000396049|MOB1A;ENST00000463975.1_1_2:74392309-74405801:-|nuORF;ENST00000497054.5_1_2:74386211-74405801:-|nuORF;nc|ENSG00000114978|Q9H8S9-2|MOB1A	61.691277971877994	0.22046696034287383	5				NaN	NaN	0	NaN	3546	3346	6888
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6895	22.888	NaN	1367.8	30	0	344.7	0.138				-1	 	0	34	428.25136262542327	854.4881723176466	2	428.2501525878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3547	3346	6888
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6908	22.917	NaN	61851	30	0	8217.8	0.203				-1	 	0	88	504.2806352532944	1006.5467175733888	2	504.2795715332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3557	3349	6907
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6909	22.92	NaN	5207.6	30	0	1065.2	0.106				-1	 	0	63	471.75448569551133	941.4944184578227	2	471.7534484863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3558	3349	6907
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6910	22.922	NaN	5655	30	0	2125.2	0.106	+			29678	PGRHFTAQ	8	49	457.2358395497653	912.4571261663306	2	457.2347717285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PGRHFTAQ_	ENST00000372022.5_1_9:136197973-136198507:-|nuORF	37.15910966729921	0.6739408393984688	5				NaN	NaN	0	NaN	3559	3349	6907
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6911	22.924	NaN	3169.1	30	0	508.64	0.106				-1	 	0	56	463.78801828298384	925.5614836327677	2	463.7867126464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3560	3349	6907
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6912	22.926	NaN	3113.3	30	0	578.5	0.106	+			17782	IESVNGKTV	9	61	473.7645752745744	945.5145976159488	2	473.76348876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IESVNGKTV_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	53.08895987439943	0.27122541748218487	5				NaN	NaN	0	NaN	3561	3349	6907
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6913	22.927	NaN	5883	30	0	2356.7	0.106	+			37478	SLKLILQR	8	48	324.2188943540161	969.6348536622482	3	324.21844482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLKLILQR_	ENSG00000140854|ENST00000379661|KATNB1	40.5726180659479	0.6527593143185008	5				NaN	NaN	0	NaN	3562	3349	6907
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6914	22.929	NaN	4505.5	30	0	2477.7	0.033				-1	 	0	44	425.7255048054272	849.4364566776544	2	425.7241516113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3563	3349	6907
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6927	22.957	NaN	8086.7	30	0	1030.3	0.214	+			36309	SESAQSKML	9	63	490.7392054740297	NaN	0	490.73907470703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SESAQSKML_	ENSG00000179344|ENST00000434651|HLA-DQB1;ENSG00000196126|ENST00000360004|HLA-DRB1;ENSG00000198502|ENST00000374975|HLA-DRB5;ENSG00000232629|ENST00000437316|HLA-DQB2;ENST00000487676.1_1_6:32628015-32629319:-|nuORF;nc|ENSG00000179344|P01920|HLA-DQB1;nc|ENSG00000232629|P05538|HLA-DQB2	141.52041321563706	0.0008657969365567067	5				NaN	NaN	0	NaN	3573	3352	6926
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6928	22.961	NaN	3503.2	30	0	1522.3	0.106			+	28637	NLDLVKID	8	59	465.26910754342174	928.5236621536435	2	465.2683410644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NLDLVKID_	REV__ENSG00000165323|ENST00000525166|FAT3;REV__FAT3|p.P4078Rfs*36|1|0.42|ENSG00000165323|chr11:92883135-92883135|C/-|frameshift_variant;REV__FAT3|p.V4082Rfs*13|1|0.23|ENSG00000165323|chr11:92883145-92883146|-/C|frameshift_variant;REV__FAT3|p.V4210Cfs*6|1|0.05|ENSG00000165323|chr11:92889212-92889213|-/T|frameshift_variant;REV__nc|ENSG00000165323|Q8TDW7|FAT3	74.25504064058377	0.37144338840759816	5				NaN	NaN	0	NaN	3574	3352	6926
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6929	22.963	NaN	4886.1	30	0	1274.7	0.106	+			3315	ASLTDTVNK	9	62	474.7542783412736	947.4940037493473	2	474.75299072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASLTDTVNK_	ENSG00000163946|ENST00000683822|TASOR;nc|ENSG00000163946|Q9UK61-2|TASOR;nc|ENSG00000163946|Q9UK61-3|TASOR;nc|ENSG00000163946|Q9UK61-4|TASOR	96.0336014099291	0.047854655524928534	5				NaN	NaN	0	NaN	3575	3352	6926
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6930	22.964	NaN	3522	30	0	436.85	0.106			+	38401	SSAAHLPHSL	10	55	510.2676736411025	1018.520794349005	2	510.2671203613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSAAHLPHSL_	REV__KRTAP10-2|p.V108Cfs*238|1|0.22|ENSG00000205445|chr21:44551137-44551137|C/-|frameshift_variant	49.44154591367651	0.46214596422418036	5				NaN	NaN	0	NaN	3576	3352	6926
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6931	22.966	NaN	2203.4	30	0	792.82	0.106				-1	 	0	45	384.7729108975081	767.5312688618162	2	384.7720031738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3577	3352	6926
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6932	22.968	NaN	689.63	30	0	145.78	0.106	+			41035	SVIDDRLKEK	10	37	601.8409423828125	NaN	0	601.8409423828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVIDDRLKEK_	ENSG00000159720|ENST00000290949|ATP6V0D1;ENST00000561658.5_1_16:67486328-67515058:-|nuORF	34.50088687433636	0.3868919978027552	5				NaN	NaN	0	NaN	3578	3352	6926
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6933	22.97	NaN	1326.3	30	0	369.67	0.032	+			5599	AVCAGVAEV	9	42	409.7083679277061	817.4021829222122	2	409.7070007324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AVCAGVAEV_	DNHD1|p.S3597Rfs*6|1|0.1|ENSG00000179532|chr11:6565718-6565719|-/AG|frameshift_variant;DNHD1|p.T4259Pfs*33|2|0.33|ENSG00000179532|chr11:6568772-6568772|C/-|frameshift_variant;ENSG00000179532|ENST00000254579|DNHD1;ENST00000532027.5_1_11:6568031-6569307:+|nuORF	33.51558372728122	0.4900267029546261	5				NaN	NaN	0	NaN	3579	3352	6926
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6946	22.998	NaN	5999.5	30	0	947.73	0.214				-1	 	0	62	448.24870554466884	894.4828581561377	2	448.2475891113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3589	3355	6945
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6947	23.001	NaN	3443.6	30	0	630.75	0.106				-1	 	0	44	323.20209600487414	644.3896390765483	2	323.2013244628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3590	3355	6945
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6948	23.003	NaN	4543.7	30	0	1174.8	0.106	+			36016	SEIERQAQV	9	60	530.2762821011597	1058.5380112691194	2	530.2755126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEIERQAQV_	ENSG00000149182|ENST00000524782|ARFGAP2;ENST00000395449.7_1_11:47187835-47198404:-|nuORF;nc|ENSG00000149182|Q8N6H7-2|ARFGAP2	90.60085204095205	0.06317133949006545	5				NaN	NaN	0	NaN	3591	3355	6945
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6949	23.005	NaN	6191.8	30	0	754.76	0.106	+			28773	NPEHASVAM	9	61	478.219349685425	954.42414643765	2	478.21826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NPEHASVAM_	ENSG00000102317|ENST00000376759|RBM3;ENST00000466764.5_1_X:48433568-48434262:+|nuORF;ENST00000488216.5_1_X:48433568-48434199:+|nuORF;ENST00000491240.5_1_X:48433911-48434199:+|nuORF	52.936696900407355	0.27249468807391813	5				NaN	NaN	0	NaN	3592	3355	6945
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6950	23.007	NaN	2322.2	30	0	908.62	0.106	+			35033	SADKKAQGP	9	53	451.2415556810904	900.4685584289808	2	451.2403564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SADKKAQGP_	ENSG00000102309|ENST00000373669|PIN4;ENST00000373662.3_1_X:71406282-71416775:+|nuORF;nc|ENSG00000102309|Q9Y237-2|PIN4;nc|ENSG00000102309|Q9Y237-3|PIN4;PIN4|p.G104Wfs*3|1|0.12|ENSG00000102309|chrX:72196901-72196902|-/T|frameshift_variant	45.97224482568171	0.3502073465782774	5				NaN	NaN	0	NaN	3593	3355	6945
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6951	23.009	NaN	1275	30	0	419.53	0.037	+			2082	ALDTLGLRGPL	11	48	563.3347778320312	NaN	0	563.3347778320312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ALDTLGLRGPL_	ENSG00000204439|ENST00000375911|C6orf47	39.873155843976775	0.387718248623866	5				NaN	NaN	0	NaN	3594	3355	6945
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6966	23.04	NaN	3139.1	30	0	398.36	0.214			+	20105	KEKKFYPE	8	66	534.7887806862393	1067.5630084392785	2	534.78857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEKKFYPE_	REV__ENSG00000198734|ENST00000367797|F5;REV__F5|p.G1754Efs*13|1|0.41|ENSG00000198734|chr1:169529768-169529768|T/-|frameshift_variant;REV__F5|p.S1606Pfs*5|1|0.07|ENSG00000198734|chr1:169536662-169536663|-/CTGAAGTGGA|frameshift_variant	58.78195531508484	0.5138399468736706	5				NaN	NaN	0	NaN	3606	3358	6965
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6967	23.044	NaN	4312.9	30	0	1188.1	0.106			+	25175	LLWQPWSST	9	59	559.289776395694	1116.564999858188	2	559.7887573242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LLWQPWSST_	REV__ENSG00000165102|ENST00000379644|HGSNAT;REV__ENST00000520678.1_1_8:43037358-43049067:+|nuORF;REV__nc|ENSG00000165102|Q68CP4|HGSNAT	37.15910966729921	0.4535818937225704	5				NaN	NaN	0	NaN	3607	3358	6965
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6968	23.046	NaN	1942.4	30	0	225.78	0.106	+			7508	DGLQITLGL	9	55	465.26910754342174	928.5236621536435	2	465.76654052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DGLQITLGL_	ENSG00000178397|ENST00000313324|FAM220A;ENST00000377689.2_1_9:38527126-38527906:+|nuORF;ENST00000395253.3_1_9:99884091-99884715:+|nuORF;nc|ENSG00000176007|B1ANY3|FAM220BP	38.80614096846853	0.43426287593479557	5				NaN	NaN	0	NaN	3608	3358	6965
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6969	23.047	NaN	879.37	30	0	196.86	0.106			+	32020	QRMCLLLD	8	39	496.2562441566831	990.4979353801663	2	495.776611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QRMCLLLD_	REV__ENST00000369833.5_1_1:110202357-110202663:+|nuORF;REV__ENST00000493395.1_1_1:110201441-110203811:+|nuORF	35.61828744233558	0.6843154725607303	5				NaN	NaN	0	NaN	3609	3358	6965
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6970	23.049	NaN	840.58	30	0	84.915	0.106	+			2329	AMLQLHLPMN	10	46	584.30517578125	NaN	0	584.30517578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AMLQLHLPMN_	nc|ENSG00000276717|A8MTI9|PRSS47P	27.882242232435846	0.4086243523356342	5				NaN	NaN	0	NaN	3610	3358	6965
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6971	23.051	NaN	18558	30	0	5024.4	0.037				-1	 	0	75	369.8858298207417	1106.6356600624251	3	369.8846130371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3611	3358	6965
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6972	23.052	NaN	1047.7	30	0	126.49	0.142				-1	AVCEQVFRK	9	54	568.7986525825218	NaN	0	568.798828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_AVC(Carbamidomethyl (C))EQVFRK_	ENSG00000139194|ENST00000266560|RBP5	39.252832667884924	0.27938773122138094	5				NaN	NaN	0	NaN	3612	3358	6965
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6988	23.087	NaN	82689	30	0	16493	0.214				-1	 	0	93	554.3250421180279	1106.6355313028557	2	554.324462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3625	3361	6987
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6989	23.09	NaN	20263	30	0	3349.1	0.106				-1	 	0	78	544.7658045073316	1087.5170560814631	2	544.7650756835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3626	3361	6987
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6990	23.092	NaN	13626	30	0	1649.8	0.106			+	47946	VSMELYGKK	9	71	535.7806661980202	1069.5467794628403	2	535.780029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_VSM(Oxidation (M))ELYGKK_	REV__ENSG00000048649|ENST00000308488|RSF1;REV__ENST00000534794.1_1_11:77413524-77475723:-|nuORF;REV__RSF1|p.L509Vfs*8|1|0.05|ENSG00000048649|chr11:77701705-77701706|-/AACT|frameshift_variant;REV__RSF1|p.V664Sfs*11|1|0.19|ENSG00000048649|chr11:77701239-77701240|-/T|frameshift_variant	79.45101966838831	0.09992237243120712	5				NaN	NaN	0	NaN	3627	3361	6987
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6991	23.094	NaN	8024.3	30	0	1563.4	0.106				-1	 	0	62	501.3224034216417	1000.6302539100834	2	501.3212585449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3628	3361	6987
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6992	23.096	NaN	5017.5	30	0	2038.8	0.106			+	37911	SPCVLELAAPA	11	46	357.52283183174734	1069.546666095442	3	357.5220642089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SPCVLELAAPA_	REV__ENSG00000008710|ENST00000262304|PKD1;REV__ENST00000343738.10_1_16:15227887-15231353:-|nuORF;REV__ENST00000525846.6_1_16:18443548-18445649:-|nuORF;REV__ENST00000532415.5_1_16:18480742-18495490:-|nuORF;REV__ENST00000532739.1_1_16:16450692-16458759:+|nuORF;REV__nc|ENSG00000008710|P98161-2|PKD1;REV__nc|ENSG00000008710|P98161-3|PKD1;REV__PKD1|p.A696Rfs*18|1|0.23|ENSG00000008710|chr16:2115389-2115390|-/G|frameshift_variant;REV__PKD1|p.V476Wfs*82|1|0.09|ENSG00000008710|chr16:2117013-2117013|C/-|frameshift_variant	26.063383197487333	0.7164075632144343	5				NaN	NaN	0	NaN	3629	3361	6987
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6993	23.098	NaN	3142.1	30	0	502.88	0.035				-1	 	0	45	336.5349086782346	1006.5828966349038	3	336.5342712402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3630	3361	6987
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	6994	23.099	NaN	6325.5	30	0	2928.7	0.14	+			47147	VLRHGYHL	8	64	497.7828444307583	993.5511359283166	2	497.7818908691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VLRHGYHL_	ENSG00000198198|ENST00000634258|SZT2;nc|ENSG00000198198|Q5T011-5|SZT2;SZT2|p.R3241Afs*11|1|0.33|ENSG00000198198|chr1:43448401-43448401|G/-|frameshift_variant	37.028477286268924	0.6747514403204248	5				NaN	NaN	0	NaN	3631	3361	6987
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7008	23.129	NaN	20607	30	0	2670	0.214				-1	 	0	89	374.56989031466406	1120.6878415441922	3	374.56915283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3642	3364	7007
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7009	23.133	NaN	12171	30	0	3496.3	0.106				-1	 	0	65	561.3510269193849	1120.6875009055698	2	561.3507080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3643	3364	7007
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7010	23.135	NaN	16177	30	0	5181.6	0.106				-1	 	0	65	458.7776795799374	915.5408062266748	2	458.7767333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3644	3364	7007
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7011	23.137	NaN	2193.3	30	0	249.54	0.106	+			2252	ALTSANLSSQ	10	59	496.2562441566831	990.4979353801663	2	496.2550964355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ALTSANLSSQ_	ENSG00000196449|ENST00000373044|YRDC	51.52775601994872	0.4429225830406686	5				NaN	NaN	0	NaN	3645	3364	7007
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7012	23.138	NaN	1842.3	30	0	1033.3	0.106				-1	 	0	30	332.19103763421396	993.5512835028419	3	332.1903381347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3646	3364	7007
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7013	23.14	NaN	2057	30	0	229.51	0.033				-1	 	0	50	435.2411300519807	868.4677071707614	2	435.2398681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3647	3364	7007
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7014	23.141	NaN	2289.3	30	0	570.68	0.139	+			16230	HEDPGQATL	9	49	484.2285300485143	966.4425071638286	2	484.2272033691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HEDPGQATL_	ENSG00000124177|ENST00000373233|CHD6;ENST00000480022.1_1_20:40033235-40042188:-|nuORF	42.86426827375447	0.38666266728046506	5				NaN	NaN	0	NaN	3648	3364	7007
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7025	23.166	NaN	3881.8	30	0	472.49	0.214	+			12232	GASEILLKK	9	64	479.8012890146844	957.5880250961688	2	479.7997131347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GASEILLKK_	ENSG00000067842|ENST00000263519|ATP2B3;nc|ENSG00000067842|Q16720-2|ATP2B3;nc|ENSG00000067842|Q16720-3|ATP2B3;nc|ENSG00000067842|Q16720-4|ATP2B3;nc|ENSG00000067842|Q16720-5|ATP2B3;nc|ENSG00000067842|Q16720-6|ATP2B3;nc|ENSG00000067842|Q16720-7|ATP2B3;nc|ENSG00000067842|Q16720-8|ATP2B3	166.67852932204877	0.003333876602083393	5				NaN	NaN	0	NaN	3656	3367	7024
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7026	23.17	NaN	2678.1	30	0	308.08	0.106	+			50676	YEEEVKKTL	9	63	569.8038240905104	1137.5930952478207	2	569.8031005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YEEEVKKTL_	ECHDC1|p.N109Ifs*9|1|0.19|ENSG00000093144|chr6:127327057-127327057|T/-|frameshift_variant;ECHDC1|p.N222Mfs*3|1|0.46|ENSG00000093144|chr6:127290128-127290128|T/-|frameshift_variant;ENSG00000093144|ENST00000454859|ECHDC1;ENST00000368287.1_1_6:127648134-127664493:-|nuORF;nc|ENSG00000093144|Q9NTX5-5|ECHDC1;nc|ENSG00000093144|Q9NTX5-6|ECHDC1;nc|ENSG00000093144|Q9NTX5|ECHDC1	83.6470233535746	0.08277643980271215	5				NaN	NaN	0	NaN	3657	3367	7024
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7027	23.172	NaN	3049.4	30	0	450.92	0.106	+			48028	VSRLEEQM	8	61	504.24411583593627	1006.4736787386726	2	504.24298095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_VSRLEEQM(Oxidation (M))_	ENSG00000047410|ENST00000367478|TPR;nc|ENSG00000047410|P12270-2|TPR;TPR|p.E1141Dfs*29|1|0.08|ENSG00000047410|chr1:186344085-186344086|-/CAGGTAAA|frameshift_variant;TPR|p.P2083Qfs*3|1|0.31|ENSG00000047410|chr1:186323735-186323735|G/-|frameshift_variant;TPR|p.T2133Lfs*63|1|0.03|ENSG00000047410|chr1:186322382-186322383|-/GTACTAATAAG|frameshift_variant;TPR|p.V1142Efs*26|1|0.08|ENSG00000047410|chr1:186344083-186344084|-/TT|frameshift_variant	101.60071028292904	0.24979566554663588	5				NaN	NaN	0	NaN	3658	3367	7024
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7028	23.174	NaN	3128.8	30	0	397.97	0.106				-1	ELVMLLLEY	9	46	380.2046880162126	NaN	0	380.2045593261719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_ELVM(Oxidation (M))LLLEY_	ENSG00000141447|ENST00000319481|OSBPL1A;OSBPL1A|p.N793Kfs*2|1|0.5|ENSG00000141447|chr18:24170366-24170367|-/T|frameshift_variant;OSBPL1A|p.N883Mfs*4|1|0.46|ENSG00000141447|chr18:24166590-24166590|T/-|frameshift_variant	25.57405402267927	0.3484490411150625	5				NaN	NaN	0	NaN	3659	3367	7024
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7029	23.175	NaN	1274.7	30	0	114.34	0.106	+			45111	TVISAKEIK	9	51	494.8052062988281	NaN	0	494.8052062988281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TVISAKEIK_	tr|U7SLS6|U7SLS6_FUSNUIroncomplexoutermembranerecepterproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02155PE=3SV=1	51.19269402634007	0.19847346126499396	5				NaN	NaN	0	NaN	3660	3367	7024
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7030	23.177	NaN	1508.5	30	0	164.12	0.106	+			20365	KESLTTREI	9	56	538.8013792668576	1075.588205600515	2	538.8009033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KESLTTREI_	ENSG00000173848|ENST00000355029|NET1;ENST00000465087.1_1_10:5494419-5494892:+|nuORF;ENST00000486354.1_1_10:5488686-5494790:+|nuORF;nc|ENSG00000173848|Q7Z628-2|NET1	46.45678178249821	0.34452392205506005	5				NaN	NaN	0	NaN	3661	3367	7024
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7031	23.179	NaN	1847.9	30	0	915.93	0.034	+			8700	EEAVKKML	8	45	474.26303362947925	NaN	0	474.2635192871094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EEAVKKML_	ENSG00000166848|ENST00000300086|TERF2IP;TERF2IP|p.N339Ifs*12|1|0.1|ENSG00000166848|chr16:75656422-75656422|A/-|frameshift_variant	40.5726180659479	1.7418937515398478	5				NaN	NaN	0	NaN	3662	3367	7024
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7047	23.212	NaN	7040.8	30	0	607.44	0.214			+	35048	SAEEKLMKVA	10	73	553.2992820703805	1104.584011207561	2	553.2985229492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAEEKLMKVA_	REV__ENSG00000030304|ENST00000374448|MUSK;REV__nc|ENSG00000030304|O15146-2|MUSK;REV__nc|ENSG00000030304|O15146-3|MUSK	62.107414245175825	0.3466735403679669	5				NaN	NaN	0	NaN	3675	3370	7046
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7048	23.215	NaN	4047.3	30	0	575.13	0.106	+			15717	GVQLSITKK	9	62	487.30684427213674	972.5991356110735	2	487.30511474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GVQLSITKK_	ENST00000357182.8_1_1:35496249-35497473:-|nuORF;ENST00000373333.1_1_1:35496252-35497272:-|nuORF	93.1432384553994	0.056003526918089595	5				NaN	NaN	0	NaN	3676	3370	7046
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7049	23.217	NaN	19500	30	0	2265	0.106	+			39908	STLTYRMTK	9	84	550.7929826940169	1099.5714124548338	2	550.7915649414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STLTYRMTK_	ENST00000446662.5_1_16:22466144-22470768:+|nuORF;ENST00000522841.6_1_16:21490806-21495758:-|nuORF	159.27591364854348	0.004707062175358555	5				NaN	NaN	0	NaN	3677	3370	7046
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7050	23.219	NaN	7911.3	30	0	1030.4	0.106	+			49395	VVTEHLINK	9	70	526.8095658766711	1051.604578820142	2	526.8082275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVTEHLINK_	ENSG00000036257|ENST00000264414|CUL3;nc|ENSG00000036257|Q13618-2|CUL3	155.5846463517096	0.005567437401040498	5				NaN	NaN	0	NaN	3678	3370	7046
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7051	23.221	NaN	2029	30	0	225.81	0.106	+			20446	KEVDVSKQL	9	64	523.2989777665263	1044.5834025998524	2	523.2979125976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEVDVSKQL_	ENSG00000128944|ENST00000249776|KNSTRN;ENST00000560220.5_1_15:40676698-40685795:+|nuORF;ENST00000560673.1_1_15:40675453-40678696:+|nuORF;nc|ENSG00000128944|Q9Y448-2|KNSTRN;nc|ENSG00000128944|Q9Y448-3|KNSTRN	61.691277971877994	0.19951612995419254	5				NaN	NaN	0	NaN	3679	3370	7046
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7052	23.223	NaN	2069.9	30	0	330.05	0.037			+	38454	SSAPQFIPLQ	10	46	363.19775964913094	1086.571449547593	3	363.19683837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSAPQFIPLQ_	REV__ENSG00000121931|ENST00000369763|LRIF1;REV__ENST00000494675.5_1_1:111492740-111495424:-|nuORF;REV__LRIF1|p.N240Mfs*2|1|0.25|ENSG00000121931|chr1:110952165-110952165|T/-|frameshift_variant	29.170058357718403	0.6416167986984785	5				NaN	NaN	0	NaN	3680	3370	7046
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7053	23.223	NaN	1566.9	30	0	245.02	0.14	+			8366	EALPREDAD	9	54	508.2389345641622	1014.4633161951244	2	507.8182067871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EALPREDAD_	ENSG00000136720|ENST00000259241|HS6ST1;nc|ENSG00000136720|O60243-2|HS6ST1	64.20726635412375	0.17854274437659667	5				NaN	NaN	0	NaN	3681	3370	7046
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7070	23.26	NaN	14127	30	0	2602.8	0.214				-1	 	0	70	481.7680378396798	961.5215227461596	2	481.76678466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3695	3373	7069
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7071	23.264	NaN	20928	30	0	2070.7	0.106	+			8851	EENSHLTSV	9	70	508.2389345641622	1014.4633161951244	2	508.2382507324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EENSHLTSV_	ENSG00000157557|ENST00000360938|ETS2	166.67852932204877	0.003333876602083393	5				NaN	NaN	0	NaN	3696	3373	7069
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7072	23.266	NaN	4015.9	30	0	1716.9	0.106				-1	 	0	34	351.5421023816312	1051.6044777450936	3	351.5414123535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3697	3373	7069
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7073	23.268	NaN	7133.7	30	0	665.65	0.106	+			15168	GTSGLILKR	9	66	472.7987246922296	943.5828964512592	2	472.79754638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTSGLILKR_	ENSG00000137825|ENST00000260386|ITPKA;ITPKA|p.K290Vfs*10|1|0.3|ENSG00000137825|chr15:41502054-41502055|-/ATGT|frameshift_variant;ITPKA|p.S212L|1|0.18|ENSG00000137825|chr15:41501683-41501683|C/T|missense_variant	72.87924865735499	0.12833875048249987	5				NaN	NaN	0	NaN	3698	3373	7069
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7074	23.269	NaN	4415.5	30	0	1124	0.106			+	-1	DGLLLLVMLD	10	57	373.21052043227706	1116.6097318970312	3	373.21014404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_DGLLLLVM(Oxidation (M))LD_	REV__ENSG00000138698|ENST00000408927|RAP1GDS1;REV__nc|ENSG00000138698|P52306-2|RAP1GDS1;REV__nc|ENSG00000138698|P52306-3|RAP1GDS1;REV__nc|ENSG00000138698|P52306-4|RAP1GDS1;REV__nc|ENSG00000138698|P52306-5|RAP1GDS1;REV__nc|ENSG00000138698|P52306-6|RAP1GDS1;REV__RAP1GDS1|p.G315Vfs*40|1|0.27|ENSG00000138698|chr4:98417398-98417398|A/-|frameshift_variant	16.006774744331256	0.7351120747673535	5				NaN	NaN	0	NaN	3699	3373	7069
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7075	23.271	NaN	6271.1	30	0	1982.4	0.038			+	45355	TVSVPFRVEE	10	50	388.20912263287187	1161.6055384988156	3	388.2080993652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TVSVPFRVEE_	REV__ENSG00000172375|ENST00000648610|C2CD2L;REV__ENST00000529874.5_1_11:118980840-118984381:+|nuORF;REV__nc|ENSG00000172375|O14523-2|C2CD2L	38.753607047826485	0.5606299674732264	5				NaN	NaN	0	NaN	3700	3373	7069
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7076	23.272	NaN	1763	30	0	335.96	0.14			+	22917	KVPDSDYGR	9	44	518.756717435072	1035.498881936944	2	518.7562866210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KVPDSDYGR_	REV__ENSG00000131747|ENST00000423485|TOP2A;REV__nc|ENSG00000131747|P11388-2|TOP2A;REV__nc|ENSG00000131747|P11388-3|TOP2A;REV__nc|ENSG00000131747|P11388-4|TOP2A;REV__TOP2A|p.K1199Efs*11|1|0.23|ENSG00000131747|chr17:40396408-40396409|-/C|frameshift_variant;REV__TOP2A|p.T1205Hfs*19|4|0.35|ENSG00000131747|chr17:40396390-40396390|T/-|frameshift_variant	25.57405402267927	0.5642445186134241	5				NaN	NaN	0	NaN	3701	3373	7069
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7090	23.303	NaN	10193	30	0	6671.3	0.214	+			322	AAPSAAREL	9	56	443.2426864466973	NaN	0	443.24273681640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAPSAAREL_	ENSG00000107960|ENST00000224950|STN1	80.45461616416974	0.0698259577396595	5				NaN	NaN	0	NaN	3712	3376	7089
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7091	23.307	NaN	14508	30	0	7553.1	0.106				-1	 	0	47	398.22234606264163	794.4301391920833	2	398.221435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3713	3376	7089
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7092	23.309	NaN	7626.9	30	0	1510.9	0.106	+			28795	NPHEVQPSY	9	62	535.7495649032003	1069.4845768732005	2	535.7489624023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NPHEVQPSY_	EGLN3|p.A203T|1|0.27|ENSG00000129521|chr14:33929083-33929083|C/T|missense_variant;ENSG00000129521|ENST00000250457|EGLN3	80.45461616416974	0.09558281504443908	5				NaN	NaN	0	NaN	3714	3376	7089
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7093	23.311	NaN	7148.4	30	0	4324.8	0.106				-1	 	0	41	340.5058084627984	1018.4955959885954	3	340.50518798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3715	3376	7089
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7094	23.313	NaN	1395	30	0	138.99	0.106				-1	 	0	42	393.76420945102205	785.5138659688441	2	393.76324462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3716	3376	7089
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7095	23.314	NaN	1605.8	30	0	573.92	0.106				-1	 	0	36	328.7100849989152	655.4056170646304	2	328.7094421386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3717	3376	7089
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7096	23.316	NaN	2184.8	30	0	530.75	0.032				-1	 	0	47	384.7729108975081	767.5312688618162	2	384.7718811035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3718	3376	7089
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7112	23.349	NaN	24175	30	0	4518.4	0.214				-1	 	0	66	439.2541932810247	876.4938336288494	2	439.2527770996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3731	3379	7111
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7113	23.353	NaN	15888	30	0	4010.2	0.106	+			14138	GSMGSFSEK	9	66	465.2059673115606	928.3973816899212	2	465.2049255371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSMGSFSEK_	EMC1|p.F608Lfs*7|1|0.38|ENSG00000127463|chr1:19231381-19231381|A/-|frameshift_variant;EMC1|p.F974Lfs*4|1|0.22|ENSG00000127463|chr1:19219363-19219363|A/-|frameshift_variant;ENSG00000127463|ENST00000477853|EMC1;nc|ENSG00000127463|Q8N766-2|EMC1;nc|ENSG00000127463|Q8N766-3|EMC1;nc|ENSG00000127463|Q8N766-4|EMC1	85.86182877749512	0.07653218437724067	5				NaN	NaN	0	NaN	3732	3379	7111
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7114	23.355	NaN	3397	30	0	535.56	0.106	+			42423	TAKSVTCTY	9	61	487.2376591196517	972.4607653061034	2	487.23626708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TAKSVTCTY_	ENSG00000141510|ENST00000269305|TP53;ENST00000505014.5_1_17:7578140-7579834:-|nuORF;nc|ENSG00000141510|P04637-2|TP53;nc|ENSG00000141510|P04637-3|TP53;nc|ENSG00000141510|P04637-4|TP53;nc|ENSG00000141510|P04637-5|TP53;nc|ENSG00000141510|P04637-6|TP53;TP53|p.C229Yfs*10|1|0.59|ENSG00000141510|chr17:7674276-7674277|AC/-|frameshift_variant;TP53|p.C242Afs*5|1|0.54|ENSG00000141510|chr17:7674240-7674240|G/-|frameshift_variant;TP53|p.E198Gfs*11|1|0.43|ENSG00000141510|chr17:7674938-7674939|-/C|frameshift_variant;TP53|p.E336Sfs*9|1|0.15|ENSG00000141510|chr17:7670704-7670704|A/-|frameshift_variant;TP53|p.G302Rfs*4|1|0.13|ENSG00000141510|chr17:7673717-7673718|-/G|frameshift_variant;TP53|p.H178Tfs*69|1|0.68|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant;TP53|p.I195Nfs*14|1|0.81|ENSG00000141510|chr17:7674947-7674948|-/T|frameshift_variant;TP53|p.P151Rfs*27|1|0.46|ENSG00000141510|chr17:7675153-7675160|GGGCGGGG/-|frameshift_variant;TP53|p.P153Afs*28|1|0.62|ENSG00000141510|chr17:7675156-7675157|-/G|frameshift_variant;TP53|p.P301Qfs*44|1|0.5|ENSG00000141510|chr17:7673718-7673718|G/-|frameshift_variant;TP53|p.P322Hfs*23|1|0.53|ENSG00000141510|chr17:7673563-7673563|G/-|frameshift_variant;TP53|p.Q331Sfs*6|1|0.66|ENSG00000141510|chr17:7673537-7673538|-/A|frameshift_variant;TP53|p.R280Kfs*59|1|0.41|ENSG00000141510|chr17:7673763-7673781|TCCTCTGTGCGCCGGTCTC/-|frameshift_variant;TP53|p.R290Kfs*53|1|0.62|ENSG00000141510|chr17:7673747-7673753|CTTGCGG/-|frameshift_variant;TP53|p.R335Lfs*10|1|0.74|ENSG00000141510|chr17:7670705-7670705|C/-|frameshift_variant;TP53|p.S127F|1|0.75|ENSG00000141510|chr17:7675232-7675232|G/A|missense_variant;TP53|p.S127T|1|0.68|ENSG00000141510|chr17:7675233-7675233|A/T|missense_variant	104.0567914643314	0.03506238181059741	5				NaN	NaN	0	NaN	3733	3379	7111
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7115	23.356	NaN	1761	30	0	242.55	0.106	+			12781	GELSKVTKV	9	54	480.7893371582031	NaN	0	480.7893371582031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GELSKVTKV_	ENSG00000119421|ENST00000373768|NDUFA8	54.722347961057174	0.17414871455573902	5				NaN	NaN	0	NaN	3734	3379	7111
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7116	23.358	NaN	1673.1	30	0	111.29	0.106			+	39839	STLLELKSK	9	59	530.8163452148438	NaN	0	530.8163452148438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))STLLELKSK_	REV__ENST00000366535.3_1_1:244579309-244580933:-|nuORF	66.42927471994793	0.121898005645852	5				NaN	NaN	0	NaN	3735	3379	7111
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7117	23.36	NaN	2219.4	30	0	223.91	0.034	+			10119	ESMTFTLI	8	57	471.2377624511719	NaN	0	471.2377624511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ESMTFTLI_	ENSG00000179399|ENST00000377067|GPC5	47.91560031466742	1.7418937515398478	5				NaN	NaN	0	NaN	3736	3379	7111
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7118	23.361	NaN	11855	30	0	2443.7	0.14	+			3677	ASYTKIVVK	9	75	504.80887665120184	1007.6032003692037	2	504.8070983886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASYTKIVVK_	ENSG00000141252|ENST00000437048|VPS53;ENST00000541903.6_1_17:422370-426182:-|nuORF	159.33581866081465	0.004693099277440949	5				NaN	NaN	0	NaN	3737	3379	7111
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7133	23.394	NaN	5435.2	30	0	1109.2	0.214				-1	 	0	53	443.7541669868876	885.4937810405752	2	443.75299072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3749	3382	7132
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7134	23.398	NaN	6123.7	30	0	485.93	0.106				-1	 	0	55	430.24883594643586	858.4831189596717	2	430.24755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3750	3382	7132
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7135	23.4	NaN	4843.3	30	0	657.43	0.106	+			17471	ICNKQDCPI	9	69	517.244456770556	1032.4743606079119	2	517.2432861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ICNKQDCPI_	CON__Q28194;ENSG00000137801|ENST00000260356|THBS1;ENST00000497720.1_1_15:39880352-39880920:+|nuORF;nc|ENSG00000137801|P07996-2|THBS1	74.25504064058377	0.12238981753128622	5				NaN	NaN	0	NaN	3751	3382	7132
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7136	23.401	NaN	5651.5	30	0	1180.4	0.106	+			10225	ETHKPHSAFLL	11	69	640.342846152747	1278.671139372294	2	640.3417358398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ETHKPHSAFLL_	ENST00000396526.7_1_14:35032263-35032341:-|nuORF	35.17822180527639	0.6208003396870814	5				NaN	NaN	0	NaN	3752	3382	7132
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7137	23.403	NaN	5753.2	30	0	1094.4	0.106				-1	 	0	69	369.8858298207417	1106.6356600624251	3	369.8849182128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3753	3382	7132
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7138	23.405	NaN	1214	30	0	86.95	0.038				-1	LFVTEEEGCL	10	58	598.777237424412	1195.5399219156238	2	598.776123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_LFVTEEEGC(Carbamidomethyl (C))L_	ENST00000484123.1_1_2:73280515-73298756:-|nuORF	34.172542307311794	0.6007644933930345	5				NaN	NaN	0	NaN	3754	3382	7132
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7139	23.406	NaN	1386.6	30	0	266.28	0.141			+	21981	KSEPSLKRP	9	45	521.3072226941775	1040.599892455155	2	521.8071899414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KSEPSLKRP_	REV__ENST00000417689.5_1_16:66968938-66969016:+|nuORF	37.81151784470057	0.4459294069877048	5				NaN	NaN	0	NaN	3755	3382	7132
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7154	23.439	NaN	8213.4	30	0	664.24	0.214				-1	 	0	71	515.3199453703122	1028.6253378074243	2	515.319091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3767	3385	7153
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7155	23.443	NaN	3835.6	30	0	2097.8	0.106	+			33742	RPPPRGTP	8	57	439.2541932810247	876.4938336288494	2	440.2557067871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RPPPRGTP_	ENSG00000139597|ENST00000380130|N4BP2L1;N4BP2L1|p.I161Mfs*11|1|0.5|ENSG00000139597|chr13:32403188-32403191|ATGA/-|frameshift_variant;nc|ENSG00000139597|Q5TBK1-2|N4BP2L1	33.51558372728122	0.7005509609380386	5				NaN	NaN	0	NaN	3768	3385	7153
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7156	23.445	NaN	2775.2	30	0	578.62	0.106				-1	 	0	55	497.7828444307583	993.5511359283166	2	497.7818908691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3769	3385	7153
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7157	23.446	NaN	3429.3	30	0	937.09	0.106			+	34593	RVMKKDLQ	8	61	509.29662406731677	1016.5786952014336	2	509.2952880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RVMKKDLQ_	REV__ENSG00000187144|ENST00000335496|SPATA21;REV__nc|ENSG00000187144|Q7Z572-2|SPATA21	36.446750945000026	0.6783611724927969	5				NaN	NaN	0	NaN	3770	3385	7153
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7158	23.448	NaN	1454.2	30	0	228.42	0.106			+	23999	LEANLGVDN	9	56	472.7373962402344	NaN	0	472.7373962402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LEANLGVDN_	REV__CDH23|p.F3223Lfs*43|1|0.34|ENSG00000107736|chr10:71812773-71812773|T/-|frameshift_variant;REV__ENSG00000107736|ENST00000224721|CDH23;REV__nc|ENSG00000107736|Q9H251-2|CDH23;REV__nc|ENSG00000107736|Q9H251-3|CDH23;REV__nc|ENSG00000107736|Q9H251-4|CDH23;REV__nc|ENSG00000107736|Q9H251-6|CDH23;REV__nc|ENSG00000107736|Q9H251-8|CDH23	54.722347961057174	0.17414871455573902	5				NaN	NaN	0	NaN	3771	3385	7153
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7159	23.45	NaN	2157.6	30	0	859.06	0.033				-1	 	0	44	420.6913061578524	839.3680593825048	2	420.6902770996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3772	3385	7153
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7160	23.451	NaN	1659.5	30	0	261.16	0.139			+	3524	ASSLSTIPAA	10	47	459.25157361372715	916.4885942942543	2	459.25	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASSLSTIPAA_	REV__ENSG00000198399|ENST00000355123|ITSN2;REV__ITSN2|p.A1240Pfs*15|1|0.05|ENSG00000198399|chr2:24217995-24217996|-/AAGGG|frameshift_variant;REV__ITSN2|p.A1583Pfs*86|1|0.25|ENSG00000198399|chr2:24205230-24205230|T/-|frameshift_variant;REV__ITSN2|p.F1478Qfs*12|1|0.3|ENSG00000198399|chr2:24209858-24209859|AA/-|frameshift_variant;REV__ITSN2|p.T790Nfs*11|1|0.43|ENSG00000198399|chr2:24261729-24261730|-/T|frameshift_variant;REV__nc|ENSG00000198399|Q9NZM3-2|ITSN2;REV__nc|ENSG00000198399|Q9NZM3-3|ITSN2;REV__nc|ENSG00000198399|Q9NZM3-4|ITSN2	40.77816245573522	0.5419747034533848	5				NaN	NaN	0	NaN	3773	3385	7153
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7173	23.48	NaN	21354	30	0	4300.1	0.214			+	29423	PCASVKCSVL	10	80	503.7571880020849	1005.4998230709698	2	503.75604248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PCASVKCSVL_	REV__ADAMTS16|p.P921S|1|0.35|ENSG00000145536|chr5:5262755-5262755|C/T|missense_variant	93.19546047674547	0.11277922692270353	5				NaN	NaN	0	NaN	3783	3388	7172
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7174	23.483	NaN	7029.1	30	0	770.39	0.106	+			17840	IFLLNTFLA	9	81	526.3121749823781	1050.6097970315561	2	526.3113403320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IFLLNTFLA_	tr|U7SWW8|U7SWW8_FUSNUTransporterOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01201PE=4SV=1	67.49366992349736	0.1516260258713357	5				NaN	NaN	0	NaN	3784	3388	7172
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7175	23.485	NaN	7185.4	30	0	1191	0.106			+	8211	EADQVPGGPQL	11	74	555.775951596268	1109.5373502593359	2	555.7752685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EADQVPGGPQL_	REV__ENSG00000008710|ENST00000262304|PKD1;REV__ENST00000568591.5_1_16:2156634-2167660:-|nuORF;REV__nc|ENSG00000008710|P98161-2|PKD1;REV__nc|ENSG00000008710|P98161-3|PKD1;REV__PKD1|p.A696Rfs*18|1|0.23|ENSG00000008710|chr16:2115389-2115390|-/G|frameshift_variant	75.04331003522576	0.19369523587789836	5				NaN	NaN	0	NaN	3785	3388	7172
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7176	23.487	NaN	11178	30	0	895.25	0.106			+	-1	TMQFRREYECF	11	84	791.8422129869832	1581.6698730407663	2	791.8402099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_TM(Oxidation (M))QFRREYEC(Carbamidomethyl (C))F_	REV__ENSG00000146909|ENST00000275820|NOM1	16.006774744331256	0.795539314609425	5				NaN	NaN	0	NaN	3786	3388	7172
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7177	23.489	NaN	3659	30	0	2003.9	0.106	+			16644	HHRPHSIG	8	54	470.7468678585086	939.4791827838172	2	470.745849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HHRPHSIG_	ENSG00000273079|ENST00000609686|GRIN2B	23.04248740728303	0.7814162927298575	5				NaN	NaN	0	NaN	3787	3388	7172
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7178	23.491	NaN	1652.4	30	0	259.62	0.106			+	24593	LGQALGNL	8	41	393.2292654294065	NaN	0	393.2292785644531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LGQALGNL_	REV__ENSG00000137700|ENST00000330775|SLC37A4;REV__ENST00000525102.5_1_11:118898396-118900094:-|nuORF;REV__ENST00000525787.1_1_11:118898858-118900094:-|nuORF;REV__ENST00000526275.5_1_11:118898858-118899149:-|nuORF;REV__ENST00000529510.5_1_11:118897799-118900094:-|nuORF;REV__nc|ENSG00000137700|O43826-2|SLC37A4;REV__nc|ENSG00000137700|O43826|SLC37A4	71.37791200682192	1.7418937515398478	5				NaN	NaN	0	NaN	3788	3388	7172
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7179	23.492	NaN	2784.1	30	0	484.43	0.035				-1	 	0	46	336.5349086782346	1006.5828966349038	3	336.5342102050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3789	3388	7172
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7192	23.52	NaN	24172	30	0	1680.9	0.214				-1	 	0	102	505.29406682694616	1008.5735807206923	2	505.2931213378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3799	3391	7191
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7193	23.523	NaN	6490.4	30	0	834.51	0.106	+			10516	EVYAGSHQY	9	71	527.2364656275073	1052.4583783218145	2	527.2357788085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EVYAGSHQY_	ENSG00000182827|ENST00000366812|ACBD3	101.25262130126117	0.03792372629710479	5				NaN	NaN	0	NaN	3800	3391	7191
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7194	23.525	NaN	4784.4	30	0	839.11	0.106				-1	 	0	62	535.2852005921634	534.2779241255633	1	535.2858276367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3801	3391	7191
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7195	23.527	NaN	3466.5	30	0	529.89	0.106				-1	 	0	51	436.2488468768868	870.4831408205736	2	436.2474670410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3802	3391	7191
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7196	23.529	NaN	2403.4	30	0	893.9	0.106	+			35494	SATQAVFQK	9	50	490.26512478354584	978.5156966338917	2	490.2635498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SATQAVFQK_	ENSG00000100949|ENST00000216840|RABGGTA;ENST00000558534.5_1_14:24738716-24740321:-|nuORF;ENST00000560998.5_1_14:24737570-24740321:-|nuORF;RABGGTA|p.P160Lfs*5|1|0.17|ENSG00000100949|chr14:24269643-24269643|G/-|frameshift_variant;RABGGTA|p.Q194Sfs*43|1|0.31|ENSG00000100949|chr14:24269542-24269542|G/-|frameshift_variant	86.88156770896713	0.07365720931774442	5				NaN	NaN	0	NaN	3803	3391	7191
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7197	23.531	NaN	3942.6	30	0	896.79	0.106	+			9768	ENMHREGKI	9	62	565.2748314071362	1128.5351098810722	2	565.273681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_ENM(Oxidation (M))HREGKI_	ENSG00000079215|ENST00000265113|SLC1A3;nc|ENSG00000079215|P43003-2|SLC1A3;SLC1A3|p.V319Efs*4|1|0.04|ENSG00000079215|chr5:36679719-36679720|-/AGAAATTT|frameshift_variant	71.87747018426188	0.13267044672804276	5				NaN	NaN	0	NaN	3804	3391	7191
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7198	23.533	NaN	1642.1	30	0	446.4	0.033	+			3486	ASSGLSVVK	9	44	424.2485685788907	846.4825842245814	2	424.24755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASSGLSVVK_	CHD8|p.D1870Rfs*3|1|0.3|ENSG00000100888|chr14:21394187-21394188|-/G|frameshift_variant;CHD8|p.I1108Nfs*7|1|0.24|ENSG00000100888|chr14:21403648-21403649|-/T|frameshift_variant;CHD8|p.L1905Ffs*30|2|0.29|ENSG00000100888|chr14:21394082-21394082|G/-|frameshift_variant;CHD8|p.N2371Ifs*6|1|0.32|ENSG00000100888|chr14:21391017-21391017|T/-|frameshift_variant;CHD8|p.N2371Kfs*2|2|0.24|ENSG00000100888|chr14:21391016-21391017|-/T|frameshift_variant;CHD8|p.V1538*|1|0.4|ENSG00000100888|chr14:21400267-21400267|T/-|frameshift_variant;ENSG00000100888|ENST00000646647|CHD8;nc|ENSG00000100888|Q9HCK8-2|CHD8	30.317721548370564	0.5199124245378496	5				NaN	NaN	0	NaN	3805	3391	7191
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7215	23.567	NaN	8801.7	30	0	2407.1	0.214				-1	 	0	62	469.7878687198618	937.5611845065237	2	469.7867431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3819	3394	7214
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7216	23.571	NaN	7583	30	0	3859.5	0.106	+			40110	STPDAVMGNPK	11	59	558.7723467268975	1115.5301405205948	2	558.7718505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STPDAVMGNPK_	ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF	93.5975768576971	0.08404719173293068	5				NaN	NaN	0	NaN	3820	3394	7214
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7217	23.573	NaN	4451.7	30	0	629.13	0.106	+			41182	SVLAETIKK	9	60	494.80662278912496	987.5986926450499	2	494.8052978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVLAETIKK_	ENSG00000074054|ENST00000696935|CLASP1;nc|ENSG00000074054|Q7Z460-2|CLASP1;nc|ENSG00000074054|Q7Z460-3|CLASP1;nc|ENSG00000074054|Q7Z460-4|CLASP1;nc|ENSG00000074054|Q7Z460-5|CLASP1;nc|ENSG00000074054|Q7Z460|CLASP1	51.19269402634007	0.2889735674168909	5				NaN	NaN	0	NaN	3821	3394	7214
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7218	23.574	NaN	2380.6	30	0	526.59	0.106			+	4981	ATRAPHPK	8	48	439.2541932810247	876.4938336288494	2	441.2586364746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATRAPHPK_	REV__ENSG00000128815|ENST00000325239|WDFY4;REV__ENST00000465910.5_1_10:50154093-50174894:+|nuORF;REV__nc|ENSG00000128815|Q6ZS81-4|WDFY4;REV__nc|ENSG00000128815|Q6ZS81-5|WDFY4	21.70233525837049	0.7917639344264583	5				NaN	NaN	0	NaN	3822	3394	7214
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7219	23.576	NaN	1715.2	30	0	300.25	0.106			+	17825	IFANQFFVAI	10	47	585.3208930524685	1168.6272331717369	2	585.319580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IFANQFFVAI_	REV__ENSG00000183726|ENST00000374358|TMEM50A;REV__ENST00000480937.5_1_1:25666968-25687193:+|nuORF	35.15202426646627	0.5927656479315102	5				NaN	NaN	0	NaN	3823	3394	7214
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7220	23.578	NaN	3758.6	30	0	456.24	0.035				-1	 	0	68	488.78863861477595	975.5627242963519	2	488.7873229980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3824	3394	7214
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7221	23.579	NaN	1341.7	30	0	343.4	0.142			+	45563	TYLWVPENGI	10	44	596.306192592772	1190.597832252344	2	596.30615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TYLWVPENGI_	REV__ENSG00000254656|ENST00000649591|RTL1;REV__RTL1|p.Q1207Rfs*77|4|0.14|ENSG00000254656|chr14:100881170-100881170|G/-|frameshift_variant	20.83715455343099	0.7096666582730032	5				NaN	NaN	0	NaN	3825	3394	7214
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7234	23.608	NaN	5631.3	30	0	1825.3	0.212				-1	NLDLITCLEQG	11	60	638.3159834081289	1274.6174138830577	2	638.314697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_NLDLITC(Carbamidomethyl (C))LEQG_	ENSG00000182141|ENST00000356929|ZNF708	23.52269567125451	0.7430573033454468	5				NaN	NaN	0	NaN	3835	3397	7233
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7235	23.611	NaN	6819.1	30	0	999.29	0.106				-1	 	0	63	465.72589335648206	929.4372337797641	2	465.7249450683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3836	3397	7233
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7236	23.613	NaN	3570.5	30	0	542.2	0.106				-1	KDQTYRELGWA	11	71	704.8462242544886	1407.677895575777	2	705.3461303710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))KDQTYRELGWA_	ENST00000483767.5_1_1:879830-879929:-|nuORF	29.170058357718403	0.683821074385409	5				NaN	NaN	0	NaN	3837	3397	7233
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7237	23.615	NaN	2126.3	30	0	240.86	0.106			+	7237	DALHVKGKY	9	61	515.7888279283179	1029.5631029234357	2	515.7880249023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DALHVKGKY_	REV__sp|P16793|UL52_HCMVAPackagingproteinUL32homologOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL52PE=3SV=1;REV__sp|Q6SW79|UL52_HCMVMPackagingproteinUL32homologOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL52PE=3SV=1	47.657333605630114	0.33044192980041115	5				NaN	NaN	0	NaN	3838	3397	7233
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7238	23.617	NaN	2507.1	30	0	376.45	0.106			+	23695	LATGWHPSEL	10	52	555.7831377942302	1109.5517226552604	2	555.7822875976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LATGWHPSEL_	REV__ENST00000306910.8_1_19:58928865-58928946:+|nuORF	28.081489160057373	0.6505064946289502	5				NaN	NaN	0	NaN	3839	3397	7233
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7239	23.619	NaN	3418.2	30	0	417.97	0.036			+	23866	LDETVSDLY	9	65	527.7527630985428	1053.4909732638855	2	527.751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LDETVSDLY_	REV__ENSG00000082269|ENST00000418814|FAM135A;REV__FAM135A|p.K508Nfs*2|1|0.34|ENSG00000082269|chr6:70524602-70524602|A/-|frameshift_variant;REV__FAM135A|p.N1165Ifs*3|1|0.07|ENSG00000082269|chr6:70526577-70526578|-/T|frameshift_variant;REV__FAM135A|p.N999Ifs*5|1|0.39|ENSG00000082269|chr6:70526073-70526073|A/-|frameshift_variant;REV__FAM135A|p.N999Kfs*2|1|0.18|ENSG00000082269|chr6:70526072-70526073|-/A|frameshift_variant;REV__nc|ENSG00000082269|Q9P2D6-4|FAM135A	30.503639358989545	0.5181749237905803	5				NaN	NaN	0	NaN	3840	3397	7233
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7240	23.619	NaN	3229.7	30	0	454.3	0.145	+			45444	TVYRNPESFK	10	58	414.21668042027756	1239.6282118610327	3	414.2157897949219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TVYRNPESFK_	ENSG00000146066|ENST00000274787|HIGD2A	28.5767321226876	0.6464621404813697	5				NaN	NaN	0	NaN	3841	3397	7233
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7252	23.647	NaN	6165.9	30	0	2155.2	0.214			+	42257	TAARPALVTP	10	52	332.8666829759656	995.5782195280968	3	332.8659973144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAARPALVTP_	REV__ENSG00000166317|ENST00000394810|SYNPO2L;REV__nc|ENSG00000166317|Q9H987-2|SYNPO2L	18.262085536374414	0.7236521404371882	5				NaN	NaN	0	NaN	3850	3400	7251
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7253	23.65	NaN	3078.2	30	0	1150.7	0.106	+			7416	DELHFLLSH	9	48	370.85828556082026	1109.5530272826609	3	370.8573303222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DELHFLLSH_	nc|ENSG00000226807|Q6ZUA9|MROH5	32.81241826257853	0.4965981579233955	5				NaN	NaN	0	NaN	3851	3400	7251
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7254	23.652	NaN	9437.8	30	0	2963.9	0.106			+	-1	RPVELMSAK	9	78	349.52649632024674	1045.5576595609402	3	349.52569580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_RPVELM(Oxidation (M))SAK_	REV__ENSG00000136383|ENST00000258888|ALPK3	47.95952297671804	0.32689736945648856	5				NaN	NaN	0	NaN	3852	3400	7251
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7255	23.654	NaN	1442	30	0	214.14	0.106			+	9461	EKNLCAEV	8	47	453.22441656176954	904.4342801903391	2	453.22332763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EKNLCAEV_	REV__ENSG00000102572|ENST00000539966|STK24;REV__nc|ENSG00000102572|Q9Y6E0|STK24	34.172542307311794	0.6954784234644539	5				NaN	NaN	0	NaN	3853	3400	7251
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7256	23.656	NaN	3187.5	30	0	846.44	0.106				-1	AERIVRTLC	9	42	373.20995779394116	1116.6080439820234	3	373.2100524902344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_AERIVRTLC(Carbamidomethyl (C))_	ENSG00000163050|ENST00000366777|COQ8A;ENST00000478406.5_1_1:227128069-227169984:+|nuORF;ENST00000485462.5_1_1:227165121-227174435:+|nuORF;nc|ENSG00000163050|Q8NI60-3|COQ8A	20.94693142431847	0.6074874384046576	5				NaN	NaN	0	NaN	3854	3400	7251
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7257	23.658	NaN	2092.2	30	0	226.89	0.037	+			12526	GEFEKKYVAT	10	63	586.3050744288217	1170.5955959244434	2	586.303955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GEFEKKYVAT_	ENSG00000132341|ENST00000543796|RAN	35.17822180527639	0.5925517082438457	5				NaN	NaN	0	NaN	3855	3400	7251
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7258	23.658	NaN	1798.1	30	0	143.8	0.141	+			17868	IFVLSAIVPD	10	64	537.3139977837809	NaN	0	537.7855834960938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IFVLSAIVPD_	ENSG00000087995|ENST00000311506|METTL2A;ENST00000333483.14_1_17:60501544-60526087:+|nuORF;nc|ENSG00000087995|Q96IZ6-2|METTL2A	35.61828744233558	0.3832230071539346	5				NaN	NaN	0	NaN	3856	3400	7251
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7266	23.678	NaN	4684.4	30	0	585.27	0.214			+	35121	SAGVGVLGTGL	11	63	465.76651889467996	NaN	0	465.7662048339844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAGVGVLGTGL_	REV__ENSG00000149489|ENST00000278833|ROM1	30.317721548370564	0.4303027717346894	5				NaN	NaN	0	NaN	3861	3403	7265
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7267	23.682	NaN	6099.6	30	0	816.26	0.106	+			13790	GQHTVLLVK	9	66	332.2068361794114	993.5986791384344	3	332.206298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GQHTVLLVK_	ENSG00000180198|ENST00000683442|RCC1;nc|ENSG00000180198|P18754-2|RCC1	68.84614121027924	0.14577793175421136	5				NaN	NaN	0	NaN	3862	3403	7265
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7268	23.684	NaN	4625.7	30	0	435.3	0.106			+	-1	LSKLAFHMR	9	70	559.8112242100099	1117.6078954868196	2	559.8106079101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_LSKLAFHM(Oxidation (M))R_	REV__ENSG00000127080|ENST00000287996|IPPK	58.78195531508484	0.22376836668196862	5				NaN	NaN	0	NaN	3863	3403	7265
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7269	23.686	NaN	2794.1	30	0	139.23	0.106	+			49485	VVYTIPAVLT	10	70	538.3224989723465	NaN	0	538.3225708007812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVYTIPAVLT_	ENSG00000187824|ENST00000341871|TMEM220;nc|ENSG00000187824|Q6QAJ8-2|TMEM220	47.657333605630114	0.3204131577145918	5				NaN	NaN	0	NaN	3864	3403	7265
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7270	23.688	NaN	2462.5	30	0	388.71	0.106	+			18752	ITLELQKQ	8	54	486.79073770454124	971.5669224758825	2	486.7895812988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ITLELQKQ_	ENSG00000137764|ENST00000178640|MAP2K5;ENST00000560591.5_1_15:67835673-67951132:+|nuORF;nc|ENSG00000137764|Q13163-2|MAP2K5;nc|ENSG00000137764|Q13163-3|MAP2K5;nc|ENSG00000137764|Q13163-4|MAP2K5	30.503639358989545	0.7238069182250283	5				NaN	NaN	0	NaN	3865	3403	7265
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7271	23.689	NaN	1947.4	30	0	484.12	0.106				-1	MSHGLLLML	9	66	523.7695593631751	NaN	0	523.769287109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Oxidation (M)	_M(Oxidation (M))SHGLLLM(Oxidation (M))L_	ENSG00000131018|ENST00000367255|SYNE1;ENST00000367256.9_1_6:152443573-152639413:-|nuORF;ENST00000460912.6_1_6:152443573-152489284:-|nuORF;ENST00000478916.5_1_6:152456172-152464916:-|nuORF;nc|ENSG00000131018|Q8NF91-11|SYNE1;nc|ENSG00000131018|Q8NF91-2|SYNE1;nc|ENSG00000131018|Q8NF91-3|SYNE1;nc|ENSG00000131018|Q8NF91-4|SYNE1;nc|ENSG00000131018|Q8NF91-8|SYNE1;nc|ENSG00000131018|Q8NF91-9|SYNE1;SYNE1|p.V8635Sfs*12|1|0.15|ENSG00000131018|chr6:152133375-152133375|T/-|frameshift_variant	33.51558372728122	0.30835390848773375	5				NaN	NaN	0	NaN	3866	3403	7265
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7272	23.691	NaN	786.56	30	0	108.7	0.033	+			2897	ASATALVSR	9	45	438.25175404885834	874.4889551645167	2	438.25067138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASATALVSR_	ENSG00000167491|ENST00000683918|GATAD2A;nc|ENSG00000167491|Q86YP4-2|GATAD2A;nc|ENSG00000167491|Q86YP4|GATAD2A	37.81151784470057	0.4459294069877048	5				NaN	NaN	0	NaN	3867	3403	7265
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7285	23.719	NaN	3712.2	30	0	850.03	0.214	+			43760	TLGHLGDI	8	50	413.227707848488	824.4408627637761	2	413.2266845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TLGHLGDI_	ENSG00000171794|ENST00000304477|UTF1	31.954861631926434	0.7126016770032289	5				NaN	NaN	0	NaN	3877	3406	7284
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7286	23.723	NaN	3630	30	0	511.01	0.106	+			25816	LSDCKRNLE	9	66	539.2713943445312	1076.5282357558624	2	539.2703857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSDCKRNLE_	ENSG00000133863|ENST00000643185|TEX15;nc|ENSG00000133863|Q9BXT5|TEX15;TEX15|p.K1907Nfs*14|1|0.11|ENSG00000133863|chr8:30843297-30843297|T/-|frameshift_variant;TEX15|p.R1708Gfs*3|1|0.19|ENSG00000133863|chr8:30843896-30843896|T/-|frameshift_variant;TEX15|p.R1708Kfs*6|1|0.41|ENSG00000133863|chr8:30843895-30843896|-/T|frameshift_variant;TEX15|p.S2464Vfs*33|1|0.4|ENSG00000133863|chr8:30837745-30837745|T/-|frameshift_variant	56.43379154798735	0.2433427591689151	5				NaN	NaN	0	NaN	3878	3406	7284
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7287	23.725	NaN	2778.4	30	0	518.12	0.106	+			4938	ATQQEFYAK	9	64	543.2683847749955	1084.522216616791	2	543.2673950195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATQQEFYAK_	ENSG00000130787|ENST00000253083|HIP1R;ENST00000538236.1_1_12:123344649-123345071:+|nuORF;HIP1R|p.E1021Vfs*2|1|0.32|ENSG00000130787|chr12:122861412-122861445|AGAGGAGGTGGCCATCCGGCCCAGCACTGCCCCC/-|frameshift_variant	70.39856735676683	0.13906523160059378	5				NaN	NaN	0	NaN	3879	3406	7284
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7288	23.726	NaN	2476.7	30	0	454.19	0.106	+			48455	VTLGNSFLH	9	57	494.26559931407206	986.5166456949441	2	494.2641906738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTLGNSFLH_	ENSG00000110799|ENST00000261405|VWF	90.36981228632155	0.0638227155548745	5				NaN	NaN	0	NaN	3880	3406	7284
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7289	23.728	NaN	3211.9	30	0	442.15	0.106	+			28155	NALNHTEQY	9	64	545.2533712465289	1088.4921895598577	2	545.252685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NALNHTEQY_	ENSG00000146281|ENST00000275072|PM20D2	75.04331003522576	0.118981335847003	5				NaN	NaN	0	NaN	3881	3406	7284
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7290	23.73	NaN	1563.1	30	0	246.33	0.106	+			32354	QTYSTEPNNLK	11	58	647.8196047247598	1293.6246565163194	2	647.8173217773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QTYSTEPNNLK_	ENSG00000108107|ENST00000344063|RPL28;nc|ENSG00000108107|P46779-2|RPL28;nc|ENSG00000108107|P46779-3|RPL28;nc|ENSG00000108107|P46779-4|RPL28;nc|ENSG00000108107|P46779-5|RPL28	53.08895987439943	0.38514566451266113	5				NaN	NaN	0	NaN	3882	3406	7284
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7291	23.732	NaN	6258.9	30	0	1384.7	0.038			+	-1	YCLRAPFSAK	10	49	404.87674974156045	NaN	0	404.8765869140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_YC(Carbamidomethyl (C))LRAPFSAK_	REV__ENSG00000172197|ENST00000324607|MBOAT1;REV__MBOAT1|p.L444Wfs*20|1|0.1|ENSG00000172197|chr6:20109628-20109628|A/-|frameshift_variant;REV__nc|ENSG00000172197|Q6ZNC8-2|MBOAT1	43.650786325866115	0.3457431322078509	5				NaN	NaN	0	NaN	3883	3406	7284
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7301	23.754	NaN	4980.9	30	0	1395.6	0.214				-1	 	0	56	362.759771967822	723.5049910024441	2	362.7589416503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3890	3409	7300
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7302	23.757	NaN	9506.9	30	0	2256.7	0.106	+			14871	GTLNQPLTK	9	65	486.28099401005306	970.5474350869061	2	486.2794189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTLNQPLTK_	ENSG00000103671|ENST00000261884|TRIP4	152.06079943815163	0.00638878961959199	5				NaN	NaN	0	NaN	3891	3409	7300
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7303	23.759	NaN	9712.1	30	0	1053	0.106	+			15530	GVDDKFYSK	9	73	529.7624543929593	1057.5103558527185	2	529.7616577148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GVDDKFYSK_	ENSG00000105254|ENST00000221855|TBCB;ENST00000392178.8_1_19:36606435-36612715:+|nuORF;ENST00000481742.1_1_19:36606435-36607215:+|nuORF;ENST00000589308.1_1_19:36606815-36612715:+|nuORF;nc|ENSG00000105254|Q99426-2|TBCB	109.43880257439609	0.029570636687953285	5				NaN	NaN	0	NaN	3892	3409	7300
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7304	23.761	NaN	4465.8	30	0	384.04	0.106				-1	 	0	68	476.78339567707155	951.5522384209431	2	476.78204345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3893	3409	7300
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7305	23.763	NaN	2837.4	30	0	389.29	0.106	+			40331	STTAILQQK	9	58	495.28599967080356	988.5574464084071	2	495.2848205566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STTAILQQK_	ENSG00000196449|ENST00000373044|YRDC	64.20726635412375	0.17854274437659667	5				NaN	NaN	0	NaN	3894	3409	7300
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7306	23.765	NaN	2379.2	30	0	295.6	0.034	+			42950	TEISTKEV	8	54	453.74334875776924	905.4721445823385	2	453.7418212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TEISTKEV_	ENSG00000079819|ENST00000337057|EPB41L2;ENST00000452150.6_1_6:131179278-131188835:-|nuORF;nc|ENSG00000079819|O43491-3|EPB41L2;nc|ENSG00000079819|O43491-4|EPB41L2	82.24051045832904	0.30490469762271794	5				NaN	NaN	0	NaN	3895	3409	7300
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7307	23.765	NaN	1656.5	30	0	192.34	0.14			+	18215	INDETVQTI	9	54	516.7653284756515	1031.5161040181029	2	516.7642211914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_INDETVQTI_	REV__ENSG00000142621|ENST00000688493|FHAD1;REV__ENST00000459961.1_1_1:15653545-15655159:+|nuORF;REV__ENST00000472131.5_1_1:15653545-15656069:+|nuORF;REV__nc|ENSG00000142621|B1AJZ9-3|FHAD1;REV__nc|ENSG00000142621|B1AJZ9-4|FHAD1;REV__nc|ENSG00000142621|B1AJZ9|FHAD1	49.536043120802724	0.308405419312776	5				NaN	NaN	0	NaN	3896	3409	7300
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7325	23.804	NaN	10511	30	0	1647.4	0.214	+			29435	PCGASQSMTLK	11	75	561.7683897334261	1121.5222265336522	2	561.7681274414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PCGASQSMTLK_	ENST00000601799.5_1_19:57742659-57743507:+|nuORF	70.8162118820467	0.22893521292419713	5				NaN	NaN	0	NaN	3911	3412	7324
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7326	23.808	NaN	2346.7	30	0	122.34	0.106	+			13856	GQWKEEQKL	9	68	573.3024584205423	1144.5903639078845	2	573.3015747070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GQWKEEQKL_	ENSG00000157020|ENST00000350697|SEC13;ENST00000477547.6_1_3:10345637-10359739:-|nuORF;ENST00000479868.6_1_3:10342947-10354476:-|nuORF;nc|ENSG00000157020|P55735-2|SEC13;nc|ENSG00000157020|P55735-3|SEC13;nc|ENSG00000157020|P55735-4|SEC13	126.24258497203832	0.01742065577488747	5				NaN	NaN	0	NaN	3912	3412	7324
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7327	23.81	NaN	3445.9	30	0	641.27	0.106	+			41194	SVLDKSLTK	9	57	495.79616053994135	989.5777681466827	2	495.79498291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVLDKSLTK_	ENSG00000198265|ENST00000358691|HELZ;ENST00000578938.1_1_17:65172688-65184471:-|nuORF;HELZ|p.L1089Ffs*20|1|0.05|ENSG00000198265|chr17:67128771-67128772|-/GTTAATG|frameshift_variant;nc|ENSG00000198265|P42694-2|HELZ	109.47833844074708	0.029530294723441826	5				NaN	NaN	0	NaN	3913	3412	7324
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7328	23.812	NaN	2585.9	30	0	319.83	0.106	+			51400	YTNGPLPDK	9	62	502.75663570037716	1003.4987184675543	2	502.75567626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YTNGPLPDK_	ENSG00000142789|ENST00000290122|CELA3A;ENSG00000219073|ENST00000337107|CELA3B	83.6470233535746	0.08277643980271215	5				NaN	NaN	0	NaN	3914	3412	7324
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7329	23.814	NaN	3068.7	30	0	640.9	0.106			+	45333	TVSGVTAAIAS	11	63	488.77014688072916	975.5257408282583	2	488.7683410644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TVSGVTAAIAS_	REV__CDCA7L|p.C406Vfs*46|1|0.5|ENSG00000164649|chr7:21903097-21903097|G/-|frameshift_variant	54.776311868738084	0.3700837260462177	5				NaN	NaN	0	NaN	3915	3412	7324
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7330	23.815	NaN	1377.6	30	0	222.55	0.036			+	11208	FHVKSHANK	9	55	534.2898559570312	NaN	0	534.2898559570312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FHVKSHANK_	REV__ENSG00000170234|ENST00000307063|PWWP2A;REV__nc|ENSG00000170234|Q96N64-2|PWWP2A;REV__nc|ENSG00000170234|Q96N64-3|PWWP2A	29.14955571784316	0.3303970763161698	5				NaN	NaN	0	NaN	3916	3412	7324
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7331	23.816	NaN	2089	30	0	435.28	0.14				-1	 	0	46	384.7729108975081	767.5312688618162	2	384.77178955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3917	3412	7324
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7348	23.853	NaN	6376.7	30	0	753.73	0.214			+	32814	RAVPVPVQ	8	73	433.26730257965806	864.5200522261161	2	433.26617431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RAVPVPVQ_	REV__ENST00000569209.1_1_16:58710156-58711324:-|nuORF	50.0245360154114	0.5941082100236891	5				NaN	NaN	0	NaN	3931	3415	7347
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7349	23.857	NaN	6101.9	30	0	1086.6	0.106			+	44118	TPYIVWLGSE	10	70	582.799573940618	1163.5845949480358	2	582.7986450195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TPYIVWLGSE_	REV__OLFML2A|p.A536T|1|0.2|ENSG00000185585|chr9:124810059-124810059|G/A|missense_variant	45.02220120713402	0.5028680121232791	5				NaN	NaN	0	NaN	3932	3415	7347
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7350	23.859	NaN	1684.5	30	0	189.39	0.106	+			20057	KEKEFEETM	9	66	585.7713059115601	NaN	0	585.7708740234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEKEFEETM_	ENSG00000204843|ENST00000628224|DCTN1;nc|ENSG00000204843|Q14203-2|DCTN1;nc|ENSG00000204843|Q14203-3|DCTN1;nc|ENSG00000204843|Q14203-4|DCTN1;nc|ENSG00000204843|Q14203-5|DCTN1;nc|ENSG00000204843|Q14203-6|DCTN1	53.08895987439943	0.18540527177656715	5				NaN	NaN	0	NaN	3933	3415	7347
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7351	23.86	NaN	2854	30	0	402.32	0.106	+			22523	KTQIGMTE	8	56	462.22670195718905	NaN	0	462.22637939453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_KTQIGM(Oxidation (M))TE_	ENSG00000054654|ENST00000555002|SYNE2;ENST00000557005.1_1_14:64469755-64489638:+|nuORF;nc|ENSG00000054654|Q8WXH0|SYNE2;SYNE2|p.A5240Qfs*5|1|0.07|ENSG00000054654|chr14:64152639-64152639|G/-|frameshift_variant;SYNE2|p.D3074Ffs*8|1|0.07|ENSG00000054654|chr14:64053132-64053133|-/TTTCTTTTTCAAATACTTG|frameshift_variant;SYNE2|p.F2563Ifs*28|1|0.34|ENSG00000054654|chr14:64051593-64051594|-/A|frameshift_variant;SYNE2|p.F2840Lfs*3|1|0.38|ENSG00000054654|chr14:64052427-64052427|T/-|frameshift_variant;SYNE2|p.F4992Lfs*13|1|0.39|ENSG00000054654|chr14:64140067-64140067|T/-|frameshift_variant;SYNE2|p.L5308Ifs*18|1|0.12|ENSG00000054654|chr14:64158750-64158751|GG/-|frameshift_variant;SYNE2|p.S1830Kfs*9|1|0.34|ENSG00000054654|chr14:64021985-64021986|-/A|frameshift_variant;SYNE2|p.S6651Rfs*83|1|0.29|ENSG00000054654|chr14:64220596-64220597|-/G|frameshift_variant	45.9519527083369	1.7418937515398478	5				NaN	NaN	0	NaN	3934	3415	7347
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7352	23.862	NaN	1572.2	30	0	526.71	0.106	+			11318	FLAEAELL	8	50	453.2500406817835	NaN	0	453.2500915527344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FLAEAELL_	ENSG00000163931|ENST00000462138|TKT;ENSG00000183856|ENST00000361170|IQGAP3;ENST00000472528.5_1_3:53269083-53276224:-|nuORF;ENST00000487660.1_1_3:53268946-53276200:-|nuORF;IQGAP3|p.Q1205Sfs*31|1|0.4|ENSG00000183856|chr1:156534628-156534628|G/-|frameshift_variant;nc|ENSG00000163931|P29401-2|TKT	60.29395666154354	1.7418937515398478	5				NaN	NaN	0	NaN	3935	3415	7347
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7353	23.864	NaN	1302.6	30	0	278.11	0.036			+	11290	FKGKKSIQI	9	40	350.2216796875	NaN	0	350.2216796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FKGKKSIQI_	REV__NOVA1|p.E462K|1|0.39|ENSG00000139910|chr14:26448099-26448099|C/T|missense_variant	19.359975847455235	0.3714571876404798	5				NaN	NaN	0	NaN	3936	3415	7347
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7354	23.865	NaN	1215.9	30	0	133.42	0.141			+	43221	TEVLFDQHK	9	47	558.7866821289062	NaN	0	558.7866821289062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TEVLFDQHK_	REV__CCDC171|p.A411D|1|0.31|ENSG00000164989|chr9:15695251-15695251|C/A|missense_variant	37.15910966729921	0.2899585034171616	5				NaN	NaN	0	NaN	3937	3415	7347
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7366	23.892	NaN	1973.5	30	0	458.38	0.214			+	11138	FGFAGTVL	8	41	406.21971393401327	810.4248749348266	2	406.7164306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FGFAGTVL_	REV__ENSG00000089692|ENST00000203629|LAG3;REV__ENST00000538079.1_1_12:6882155-6887174:+|nuORF	21.70233525837049	0.7917639344264583	5				NaN	NaN	0	NaN	3946	3418	7365
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7367	23.896	NaN	2561.6	30	0	312.62	0.106	+			3902	ATAQNIMNPK	10	64	544.2829980871528	1086.5514432411055	2	544.2824096679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATAQNIMNPK_	ENSG00000175311|ENST00000311620|ANKS4B	104.0567914643314	0.06564926686336217	5				NaN	NaN	0	NaN	3947	3418	7365
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7368	23.898	NaN	2574.1	30	0	346.06	0.106	+			10646	EYQFTGTY	8	55	504.71810316925695	1007.4216534053139	2	504.717529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EYQFTGTY_	ENSG00000053900|ENST00000315368|ANAPC4;ENST00000504256.5_1_4:25418140-25418221:+|nuORF;ENST00000506973.1_1_4:25418140-25419370:+|nuORF;nc|ENSG00000053900|Q9UJX5-3|ANAPC4	45.9519527083369	0.6193794311207887	5				NaN	NaN	0	NaN	3948	3418	7365
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7369	23.9	NaN	3631.6	30	0	300.4	0.106	+			12425	GEAQVGKTSL	10	60	495.2680355107543	988.5215180883087	2	495.2667236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEAQVGKTSL_	ENSG00000140983|ENST00000315082|RHOT2;ENST00000562598.5_1_16:718199-720176:+|nuORF;ENST00000562708.5_1_16:718199-718465:+|nuORF;ENST00000567017.5_1_16:718199-721765:+|nuORF;ENST00000568950.5_1_16:718199-721765:+|nuORF;ENST00000569675.5_1_16:718199-718652:+|nuORF	104.42354056486148	0.06456012287859861	5				NaN	NaN	0	NaN	3949	3418	7365
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7370	23.902	NaN	2946.9	30	0	495.29	0.106				-1	ASMKKVKSL	9	37	336.53436279296875	NaN	0	336.53436279296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_ASM(Oxidation (M))KKVKSL_	ENST00000369426.9_1_1:119575536-119588262:-|nuORF	31.529811441608018	0.3183796599642538	5				NaN	NaN	0	NaN	3950	3418	7365
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7371	23.903	NaN	3067.4	30	0	618.73	0.106	+			36091	SEKEKQIVL	9	66	537.3156872180645	1072.6168215029288	2	537.3138427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SEKEKQIVL_	ENSG00000167861|ENST00000425042|HID1;HID1|p.L141Wfs*62|1|0.54|ENSG00000167861|chr17:74963048-74963048|G/-|frameshift_variant;HID1|p.P773Lfs*8|1|0.17|ENSG00000167861|chr17:74951619-74951619|G/-|frameshift_variant;nc|ENSG00000167861|Q8IV36-2|HID1	45.02220120713402	0.3613509778819777	5				NaN	NaN	0	NaN	3951	3418	7365
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7372	23.905	NaN	1015.3	30	0	137.27	0.034	+			3626	ASVVAIDNK	9	40	458.7595996634743	915.5046463937487	2	458.75830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASVVAIDNK_	ENSG00000102804|ENST00000458659|TSC22D1;ENSG00000157514|ENST00000372383|TSC22D3;ENST00000487881.2_1_13:45010128-45010713:-|nuORF;nc|ENSG00000102804|Q15714-2|TSC22D1;nc|ENSG00000102804|Q15714-3|TSC22D1;nc|ENSG00000157514|Q99576|TSC22D3	93.1432384553994	0.056003526918089595	5				NaN	NaN	0	NaN	3952	3418	7365
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7383	23.93	NaN	5085.8	30	0	429.99	0.214				-1	 	0	63	546.3025680236991	545.2952915570991	1	546.3015747070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	3960	3421	7382
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7384	23.934	NaN	1978.5	30	0	196.56	0.106			+	29456	PCNARDKEM	9	59	532.2360092238342	1062.4574655144684	2	532.2346801757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PCNARDKEM_	REV__ENSG00000169249|ENST00000307771|ZRSR2;REV__nc|ENSG00000212643|Q15695|ZRSR2P1	76.7741389293348	0.11149722112137898	5				NaN	NaN	0	NaN	3961	3421	7382
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7385	23.936	NaN	2236.1	30	0	1093.5	0.106	+			43832	TLSPQERPP	9	47	512.7765242232164	1023.5384955132328	2	512.7748413085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TLSPQERPP_	ENST00000575894.1_1_16:697728-698187:+|nuORF	35.15202426646627	0.4747332964206883	5				NaN	NaN	0	NaN	3962	3421	7382
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7386	23.938	NaN	3981.4	30	0	2098.6	0.106			+	48146	VSWTVPAVA	9	54	465.2562831296615	NaN	0	465.255859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSWTVPAVA_	REV__ENSG00000138172|ENST00000260743|CALHM2;REV__nc|ENSG00000138172|Q9HA72-2|CALHM2;REV__nc|ENSG00000138172|Q9HA72-3|CALHM2	38.80614096846853	0.28164298475537564	5				NaN	NaN	0	NaN	3963	3421	7382
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7387	23.94	NaN	1914.3	30	0	227.31	0.106	+			692	AEALPKQSV	9	56	471.76729756454483	941.5200421958897	2	471.76641845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEALPKQSV_	ENSG00000145741|ENST00000380591|BTF3;nc|ENSG00000145741|P20290-2|BTF3	56.43379154798735	0.2433427591689151	5				NaN	NaN	0	NaN	3964	3421	7382
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7388	23.941	NaN	3358.5	30	0	712.39	0.106	+			45926	VAQSLVFP	8	46	430.74681567780067	859.4790784224014	2	430.7450866699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VAQSLVFP_	nc|ENSG00000108684|Q16515|ASIC2	76.84663266511073	0.3498490246073164	5				NaN	NaN	0	NaN	3965	3421	7382
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7389	23.943	NaN	1115.8	30	0	118.47	0.035			+	18457	ISEFTVIPA	9	49	488.77014688072916	975.5257408282583	2	488.76806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ISEFTVIPA_	REV__tr|U7SV10|U7SV10_FUSNUMethylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferaseTrmFOOS=FusobacteriumnucleatumCTI-5OX=1316586GN=trmFOPE=3SV=1	31.529811441608018	0.5085848003137583	5				NaN	NaN	0	NaN	3966	3421	7382
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7399	23.965	NaN	2056.6	30	0	419.87	0.212			+	-1	WVPCCLWRR	9	53	638.3159834081289	1274.6174138830577	2	638.8177490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_WVPCC(Carbamidomethyl (C))LWRR_	REV__ENST00000492555.5_1_3:52562203-52563345:-|nuORF	17.364965105453717	0.6112419832031293	5				NaN	NaN	0	NaN	3973	3424	7398
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7400	23.968	NaN	1703.3	30	0	239.71	0.106			+	27440	MLHLFVLGA	9	53	500.7857717609992	999.5569905887984	2	500.78448486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MLHLFVLGA_	REV__ENSG00000159461|ENST00000290649|AMFR;REV__ENST00000568657.1_1_16:56442078-56458825:-|nuORF	29.841539824830324	0.5243625958137083	5				NaN	NaN	0	NaN	3974	3424	7398
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7401	23.97	NaN	1436.8	30	0	242.44	0.106			+	-1	CPFGLRGWI	9	51	553.2829510902882	1104.5513492473763	2	553.2836303710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_C(Carbamidomethyl (C))PFGLRGWI_	REV__ENST00000514665.1_1_4:120141358-120141406:+|nuORF	31.954861631926434	0.5046124803899898	5				NaN	NaN	0	NaN	3975	3424	7398
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7402	23.972	NaN	1465.8	30	0	295.79	0.106	+			36766	SHTPQTPL	8	35	440.7310137219795	879.447474510759	2	440.73028564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SHTPQTPL_	ENSG00000140534|ENST00000268138|TICRR;nc|ENSG00000140534|Q7Z2Z1-2|TICRR;TICRR|p.P1378Lfs*50|1|0.23|ENSG00000140534|chr15:89624439-89624439|C/-|frameshift_variant	31.954861631926434	0.7126016770032289	5				NaN	NaN	0	NaN	3976	3424	7398
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7403	23.974	NaN	587.68	30	0	34.061	0.037			+	26730	LVLLDMPLKQ	10	43	585.3543701171875	NaN	0	585.3543701171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LVLLDMPLKQ_	REV__ANKRD2|p.D214Afs*13|1|0.1|ENSG00000165887|chr10:97581319-97581322|GACT/-|frameshift_variant;REV__ENSG00000165887|ENST00000370655|ANKRD2;REV__nc|ENSG00000165887|Q9GZV1-2|ANKRD2;REV__nc|ENSG00000165887|Q9GZV1|ANKRD2	15.641811463095205	0.4201028297492154	5				NaN	NaN	0	NaN	3977	3424	7398
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7415	24	NaN	2787.1	30	0	233.28	0.214	+			36284	SEQGLAKAV	9	55	451.75202941203133	901.4895058908627	2	451.7508239746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEQGLAKAV_	ENSG00000179409|ENST00000319004|GEMIN4;GEMIN4|p.A547V|1|0.24|ENSG00000179409|chr17:746403-746403|G/A|missense_variant	104.0567914643314	0.03506238181059741	5				NaN	NaN	0	NaN	3986	3427	7414
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7416	24.003	NaN	2164	30	0	380.73	0.106	+			19969	KEGVFAKEV	9	63	503.7826300804184	1005.5507072276368	2	503.78271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEGVFAKEV_	ENSG00000169710|ENST00000306749|FASN	56.43379154798735	0.2433427591689151	5				NaN	NaN	0	NaN	3987	3427	7414
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7417	24.005	NaN	1514.3	30	0	462.36	0.106	+			8669	EDTIAKVKGL	10	39	358.5455017089844	NaN	0	358.5455017089844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EDTIAKVKGL_	ENSG00000163625|ENST00000295888|WDFY3;nc|ENSG00000163625|Q8IZQ1-2|WDFY3	35.15202426646627	0.38475398474706135	5				NaN	NaN	0	NaN	3988	3427	7414
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7418	24.007	NaN	1510.5	30	0	127.01	0.106			+	21798	KQWKKSPR	8	60	529.3179855396799	1056.6214181461596	2	529.3184204101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KQWKKSPR_	REV__ENST00000552270.1_1_12:105464468-105467659:-|nuORF	44.116797842482775	0.6307669463330267	5				NaN	NaN	0	NaN	3989	3427	7414
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7419	24.009	NaN	741.35	30	0	87.747	0.106	+			42036	SWEDAAILL	9	46	509.2640686035156	NaN	0	509.2640686035156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SWEDAAILL_	CSF2RB|p.A662Lfs*36|1|0.46|ENSG00000100368|chr22:36937788-36937788|G/-|frameshift_variant;CSF2RB|p.S568Afs*130|1|0.47|ENSG00000100368|chr22:36937504-36937504|C/-|frameshift_variant;ENSG00000100368|ENST00000403662|CSF2RB;nc|ENSG00000100368|P32927-2|CSF2RB	31.954861631926434	0.3162336699109506	5				NaN	NaN	0	NaN	3990	3427	7414
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7420	24.011	NaN	2029.3	30	0	549.98	0.106			+	26103	LSNNPVAP	8	47	406.21971393401327	810.4248749348266	2	406.2193298339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSNNPVAP_	REV__SYT4|p.K89N|1|0.31|ENSG00000132872|chr18:43274162-43274162|C/A|missense_variant	55.50420428727701	0.5462892107279674	5				NaN	NaN	0	NaN	3991	3427	7414
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7421	24.012	NaN	1185.4	30	0	136.23	0.036			+	31157	QGINHKLLQ	9	52	525.8065795898438	NaN	0	525.8065795898438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QGINHKLLQ_	REV__CUX2|p.A1430Cfs*11|1|0.26|ENSG00000111249|chr12:111348143-111348144|-/C|frameshift_variant;REV__CUX2|p.L655Sfs*49|1|0.38|ENSG00000111249|chr12:111312159-111312160|-/T|frameshift_variant;REV__CUX2|p.P1429Lfs*23|1|0.33|ENSG00000111249|chr12:111348144-111348144|C/-|frameshift_variant;REV__ENSG00000111249|ENST00000261726|CUX2	68.78682469695295	0.1118430353446351	5				NaN	NaN	0	NaN	3992	3427	7414
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7434	24.04	NaN	4219.4	30	0	631.88	0.214				-1	 	0	61	369.23762384529306	736.4606947573861	2	369.2369384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4002	3430	7433
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7435	24.044	NaN	5219.8	30	0	755.74	0.106	+			32844	RCQMLVPVL	9	68	529.7966230469253	1057.5786931606506	2	529.7960205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RCQMLVPVL_	nc|ENSG00000185842|Q0VDD8|DNAH14	57.81127852772723	0.2318599694398087	5				NaN	NaN	0	NaN	4003	3430	7433
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7436	24.046	NaN	4584.2	30	0	664.68	0.106				-1	 	0	59	461.7416492168946	921.4687455005892	2	461.7405090332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4004	3430	7433
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7437	24.048	NaN	3013.5	30	0	547.48	0.106			+	27350	MILPSSPPIEL	11	69	598.8332019212237	1195.6518509092473	2	598.8320922851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MILPSSPPIEL_	REV__ENST00000439058.5_1_7:20259313-20259349:+|nuORF	48.601550744091256	0.44024757269956427	5				NaN	NaN	0	NaN	4005	3430	7433
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7438	24.05	NaN	4562.4	30	0	2150.4	0.106	+			35429	SASALLLW	8	53	430.74681567780067	859.4790784224014	2	430.7451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SASALLLW_	ENST00000366292.6_1_12:129299368-129299485:-|nuORF	54.76467175910256	0.5536104764165384	5				NaN	NaN	0	NaN	4006	3430	7433
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7439	24.051	NaN	1438.9	30	0	258.72	0.106	+			6535	AYGASKTF	8	50	422.71446677429157	843.4143806153832	2	422.7135314941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AYGASKTF_	ENSG00000132383|ENST00000254719|RPA1;RPA1|p.N274Mfs*5|1|0.18|ENSG00000132383|chr17:1879272-1879272|A/-|frameshift_variant	96.19043198914106	0.25873003980794995	5				NaN	NaN	0	NaN	4007	3430	7433
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7440	24.053	NaN	4265.9	30	0	1168.5	0.037				-1	 	0	53	376.8930626781664	1127.6573586346992	3	376.8919677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4008	3430	7433
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7456	24.087	NaN	9247.4	30	0	819.6	0.214				-1	 	0	72	502.2574079294246	1002.5002629256492	2	502.25634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4021	3433	7455
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7457	24.09	NaN	22051	30	0	7900	0.106				-1	 	0	43	334.20208501702916	999.5844256512876	3	334.2013854980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4022	3433	7455
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7458	24.092	NaN	5513.1	30	0	615.75	0.106	+			41390	SVMLGGRNIK	10	70	537.8092510824572	1073.6039492317143	2	537.808349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVMLGGRNIK_	ENSG00000179950|ENST00000526683|PUF60;nc|ENSG00000179950|Q9UHX1-2|PUF60;nc|ENSG00000179950|Q9UHX1-3|PUF60;nc|ENSG00000179950|Q9UHX1-4|PUF60;nc|ENSG00000179950|Q9UHX1-5|PUF60;nc|ENSG00000179950|Q9UHX1-6|PUF60	106.88024417677582	0.05726438866303799	5				NaN	NaN	0	NaN	4023	3433	7455
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7459	24.094	NaN	18398	30	0	2970.3	0.106	+			5457	ATYSVGMQK	9	67	492.74544176160236	983.4763305900047	2	492.7443542480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATYSVGMQK_	ENSG00000131941|ENST00000254260|RHPN2;ENST00000592247.1_1_19:33470904-33481620:-|nuORF;nc|ENSG00000131941|Q8IUC4-2|RHPN2;nc|ENSG00000258628|A8MT19|RHPN2P1	180.86945649972546	0.001208757763874378	5				NaN	NaN	0	NaN	4024	3433	7455
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7460	24.096	NaN	5682.1	30	0	2142.8	0.106	+			15573	GVGNVRVK	8	58	414.75691115432653	827.4992693754531	2	414.756103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GVGNVRVK_	ENSG00000181234|ENST00000435159|TMEM132C;TMEM132C|p.D986Mfs*13|1|0.27|ENSG00000181234|chr12:128705920-128705920|G/-|frameshift_variant	40.5726180659479	0.6527593143185008	5				NaN	NaN	0	NaN	4025	3433	7455
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7461	24.098	NaN	4965.9	30	0	489.91	0.035				-1	 	0	64	516.3044584500025	1030.5943639668048	2	516.3035278320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4026	3433	7455
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7462	24.098	NaN	7337.8	30	0	2077.1	0.145			+	27463	MLPGWRNLIP	10	41	399.5579993633195	1195.6521686901585	3	399.5570983886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MLPGWRNLIP_	REV__ENSG00000172073|ENST00000303254|TEX37	31.529811441608018	0.6223461015008678	5				NaN	NaN	0	NaN	4027	3433	7455
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7477	24.132	NaN	31546	30	0	8479.1	0.213			+	-1	YGTGKARCTLM	11	83	608.7937848720276	1215.573016810855	2	608.792724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_YGTGKARCTLM(Oxidation (M))_	REV__ADAMTS5|p.K666M|1|0.1|ENSG00000154736|chr21:26932056-26932056|T/A|missense_variant	82.7504851949679	0.12944296023181348	5				NaN	NaN	0	NaN	4039	3436	7476
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7478	24.135	NaN	13195	30	0	2543.8	0.106	+			39861	STLNVGVNK	9	79	466.26450780451734	930.5144626758347	2	466.26361083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STLNVGVNK_	AGBL5|p.R813Gfs*68|1|0.4|ENSG00000084693|chr2:27069649-27069649|C/-|frameshift_variant;ENSG00000084693|ENST00000360131|AGBL5;nc|ENSG00000084693|Q8NDL9-2|AGBL5;nc|ENSG00000084693|Q8NDL9-3|AGBL5	159.27591364854348	0.004707062175358555	5				NaN	NaN	0	NaN	4040	3436	7476
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7479	24.137	NaN	14554	30	0	4501.6	0.106				-1	 	0	64	344.5386672821221	1030.5941724465663	3	344.5379638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4041	3436	7476
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7480	24.139	NaN	23973	30	0	4982.1	0.106				-1	 	0	66	439.2543200902085	876.4940872472171	2	439.2530212402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4042	3436	7476
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7481	24.141	NaN	6318.2	30	0	1191.7	0.106				-1	DAGAMVKMAK	10	63	527.2564216656348	1052.4982903980695	2	527.2556762695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Oxidation (M)	_DAGAM(Oxidation (M))VKM(Oxidation (M))AK_	ENSG00000125851|ENST00000262545|PCSK2;ENST00000459871.1_1_20:17445809-17462712:+|nuORF;nc|ENSG00000125851|P16519-2|PCSK2;nc|ENSG00000125851|P16519-3|PCSK2	66.42927471994793	0.3073667423445326	5				NaN	NaN	0	NaN	4043	3436	7476
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7482	24.143	NaN	2884.9	30	0	433.53	0.034	+			36312	SESDKTAVL	9	48	475.24640672292213	948.4782605126443	2	475.2449035644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SESDKTAVL_	ENSG00000147526|ENST00000317827|TACC1;ENST00000522752.5_1_8:38614850-38697853:+|nuORF;nc|ENSG00000147526|O75410-10|TACC1;nc|ENSG00000147526|O75410-2|TACC1;nc|ENSG00000147526|O75410-3|TACC1;nc|ENSG00000147526|O75410-4|TACC1;nc|ENSG00000147526|O75410-5|TACC1;nc|ENSG00000147526|O75410-6|TACC1;nc|ENSG00000147526|O75410-7|TACC1;nc|ENSG00000147526|O75410-9|TACC1	56.43379154798735	0.2433427591689151	5				NaN	NaN	0	NaN	4044	3436	7476
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7483	24.143	NaN	2487	30	0	274.64	0.142	+			13177	GHSLSTWGDW	10	60	573.2528740073045	1144.491195081409	2	573.2520141601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GHSLSTWGDW_	SLC40A1|p.R40W|1|0.1|ENSG00000138449|chr2:189575314-189575314|G/A|missense_variant	29.14955571784316	0.6417842315402807	5				NaN	NaN	0	NaN	4045	3436	7476
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7501	24.183	NaN	19662	30	0	2854.5	0.214				-1	 	0	80	585.8103248271458	1169.6060967210915	2	585.8095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4060	3439	7500
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7502	24.186	NaN	14222	30	0	2035.2	0.106			+	-1	LKETKSILC	9	75	546.3096988181819	1090.6048447031637	2	546.3089599609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LKETKSILC(Carbamidomethyl (C))_	REV__ENSG00000115464|ENST00000398571|USP34;REV__nc|ENSG00000115464|Q70CQ2-2|USP34;REV__nc|ENSG00000115464|Q70CQ2-3|USP34;REV__USP34|p.L3228*|1|0.22|ENSG00000115464|chr2:61190564-61190564|A/-|frameshift_variant	79.71258880314673	0.09879134589249085	5				NaN	NaN	0	NaN	4061	3439	7500
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7503	24.188	NaN	2906.1	30	0	804.2	0.106				-1	SKKLMDKTK	9	41	365.54584042537573	1093.6156918763272	3	365.5450439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_SKKLM(Oxidation (M))DKTK_	ENSG00000165392|ENST00000298139|WRN	28.081489160057373	0.5408112046645406	5				NaN	NaN	0	NaN	4062	3439	7500
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7504	24.19	NaN	3304.9	30	0	527.78	0.106				-1	 	0	58	472.7932835638057	943.5720141944114	2	472.7922668457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4063	3439	7500
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7505	24.192	NaN	2592.5	30	0	767.98	0.106	+			18084	IKMKKTCI	8	44	322.1936968631128	NaN	0	322.1937561035156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IKMKKTCI_	ENST00000522378.5_1_8:27633943-27633997:+|nuORF	23.04248740728303	1.7418937515398478	5				NaN	NaN	0	NaN	4064	3439	7500
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7506	24.194	NaN	6999.2	30	0	891.59	0.035			+	603	ADQETSGKPL	10	76	523.2621221903695	1044.509691447539	2	523.269775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ADQETSGKPL_	REV__ENSG00000105290|ENST00000221891|APLP1;REV__nc|ENSG00000105290|P51693|APLP1	82.83050618871818	0.17249597090446123	5				NaN	NaN	0	NaN	4065	3439	7500
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7507	24.194	NaN	3088.7	30	0	743.44	0.139	+			30679	QCFLKLDP	8	65	482.25280542505374	962.4910579169075	2	482.25213623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QCFLKLDP_	USP44|p.L306P|1|0.37|ENSG00000136014|chr12:95533340-95533340|A/G|missense_variant	42.396135135203025	0.6414440140393314	5				NaN	NaN	0	NaN	4066	3439	7500
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7522	24.228	NaN	23371	30	0	4448.5	0.214				-1	 	0	65	513.7596033277634	1025.5046537223268	2	513.7587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4078	3442	7521
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7523	24.231	NaN	10917	30	0	2516.1	0.106			+	-1	KGESSVPASAA	11	76	523.2621221903695	1044.509691447539	2	523.261474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))KGESSVPASAA_	REV__ENSG00000223638|ENST00000434937|RFPL4A	63.69406221917213	0.2904805327065929	5				NaN	NaN	0	NaN	4079	3442	7521
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7524	24.233	NaN	4194.2	30	0	2646.8	0.106			+	31576	QLQVSLAVC	9	58	480.762062310353	959.509571687506	2	480.7608337402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QLQVSLAVC_	REV__SHARPIN|p.R202C|1|0.33|ENSG00000179526|chr8:144099758-144099758|G/A|missense_variant	53.351449002276354	0.2690372970092375	5				NaN	NaN	0	NaN	4080	3442	7521
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7525	24.235	NaN	4144.5	30	0	226.91	0.106				-1	 	0	68	508.3118975143646	1014.6092420955292	2	508.31097412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4081	3442	7521
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7526	24.237	NaN	8189.3	30	0	4542.1	0.106				-1	GTCFGKFTK	9	44	349.17661527180155	1044.5080164156047	3	349.1759948730469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_GTC(Carbamidomethyl (C))FGKFTK_	ENSG00000132603|ENST00000254940|NIP7;ENST00000565034.1_1_16:69373956-69375289:+|nuORF;nc|ENSG00000132603|Q9Y221-2|NIP7	36.446750945000026	0.4619375763483977	5				NaN	NaN	0	NaN	4082	3442	7521
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7527	24.238	NaN	3206.6	30	0	404.35	0.034	+			2336	AMSAEERL	8	49	453.72030781534227	905.4260626974846	2	453.7191162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AMSAEERL_	ENSG00000136371|ENST00000258874|MTHFS	73.97473282117947	0.3737790450121076	5				NaN	NaN	0	NaN	4083	3442	7521
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7528	24.239	NaN	2322.7	30	0	303.33	0.14				-1	GENVTLTCN	9	59	504.2256009354645	1006.436648937729	2	504.22491455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_GENVTLTC(Carbamidomethyl (C))N_	ENSG00000179639|ENST00000693622|FCER1A	56.72105179125745	0.24094814563026265	5				NaN	NaN	0	NaN	4084	3442	7521
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7541	24.268	NaN	104000	30	0	27733	0.191	+			28204	NASRDQVVY	9	76	526.2629537729209	1050.5113546126418	2	526.26220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NASRDQVVY_	ENSG00000167608|ENST00000619895|TMC4;nc|ENSG00000167608|Q7Z404-1|TMC4;nc|ENSG00000167608|Q7Z404|TMC4;TMC4|p.F240Lfs*221|1|0.42|ENSG00000167608|chr19:54168267-54168268|AA/-|frameshift_variant;TMC4|p.Q383Rfs*6|1|0.37|ENSG00000167608|chr19:54163872-54163872|G/-|frameshift_variant	78.26377905018397	0.10505600812668463	5				NaN	NaN	0	NaN	4094	3445	7540
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7542	24.271	NaN	20659	30	0	5907.7	0.106	+			34065	RSNSTLNKH	9	74	528.7799971365022	1055.5454413398043	2	528.779541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RSNSTLNKH_	ENSG00000144445|ENST00000281772|KANSL1L;ENST00000453904.2_1_2:211018217-211034955:-|nuORF;KANSL1L|p.I396Sfs*4|1|0.17|ENSG00000144445|chr2:210129075-210129075|T/-|frameshift_variant;KANSL1L|p.K937Rfs*42|2|0.25|ENSG00000144445|chr2:210023103-210023103|T/-|frameshift_variant;KANSL1L|p.N111Tfs*36|1|0.38|ENSG00000144445|chr2:210154251-210154251|T/-|frameshift_variant;KANSL1L|p.N311Mfs*63|4|0.21|ENSG00000144445|chr2:210153651-210153651|T/-|frameshift_variant;KANSL1L|p.T655Dfs*2|1|0.13|ENSG00000144445|chr2:210040487-210040488|-/T|frameshift_variant;KANSL1L|p.Y833Ifs*2|1|0.2|ENSG00000144445|chr2:210025171-210025172|-/T|frameshift_variant;nc|ENSG00000144445|A0AUZ9-2|KANSL1L;nc|ENSG00000144445|A0AUZ9-3|KANSL1L;nc|ENSG00000144445|A0AUZ9-4|KANSL1L	49.44154591367651	0.3095138337212152	5				NaN	NaN	0	NaN	4095	3445	7540
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7543	24.273	NaN	8885.7	30	0	1243.6	0.106				-1	 	0	81	465.7910174137082	929.5674818942164	2	465.789794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4096	3445	7540
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7544	24.275	NaN	5882.8	30	0	819.71	0.106	+			42233	TAALAHTSY	9	62	467.7360006681418	933.4574484030836	2	467.73480224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TAALAHTSY_	ENSG00000205277|ENST00000536621|MUC12;nc|ENSG00000205277|Q9UKN1|MUC12	84.9155231211612	0.07920012719736333	5				NaN	NaN	0	NaN	4097	3445	7540
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7545	24.277	NaN	6385.6	30	0	804.8	0.106	+			34849	RYQKSTELL	9	69	569.3174325960537	1136.6203122589072	2	569.3163452148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RYQKSTELL_	ENSG00000132475|ENST00000254810|H3-3B;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000168148|ENST00000366696|H3-4;ENSG00000183598|ENST00000331491|H3C13;ENSG00000188375|ENST00000340398|H3-5;ENSG00000197153|ENST00000359303|H3C12;ENSG00000197409|ENST00000356476|H3C4;ENSG00000203811|ENST00000369158|H3C14;ENSG00000203852|ENST00000403683|H3C15;ENSG00000273983|ENST00000614378|H3C8;ENSG00000274750|ENST00000614911|H3C6;ENSG00000275379|ENST00000616365|H3C11;ENSG00000275714|ENST00000613854|H3C1;ENSG00000277775|ENST00000618052|H3C7;ENSG00000278828|ENST00000685041|H3C10;ENST00000401004.2_1:120904811-120905087:+|nuORF;ENST00000586518.1_1_17:73774674-73775034:-|nuORF;nc|ENSG00000273213|Q5TEC6|H3-7	78.26377905018397	0.10505600812668463	5				NaN	NaN	0	NaN	4098	3445	7540
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7546	24.279	NaN	4334	30	0	905.46	0.106	+			49463	VVWWPQAL	8	56	499.77698208340473	997.5394112336095	2	499.7756652832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VVWWPQAL_	ENST00000521580.2_1_1:35320720-35321281:-|nuORF	28.2542754592877	0.7411748056684583	5				NaN	NaN	0	NaN	4099	3445	7540
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7547	24.281	NaN	4277.2	30	0	440.04	0.035	+			51360	YTAPPLQSK	9	70	502.7748610180733	1003.5351691029466	2	502.77423095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YTAPPLQSK_	ENSG00000155008|ENST00000373173|APOOL	50.033510581677724	0.3025703251535696	5				NaN	NaN	0	NaN	4100	3445	7540
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7558	24.306	NaN	7140.7	30	0	1517.4	0.214	+			9288	EHMKTHAGAL	10	71	547.7738393518778	1093.5331257705554	2	547.7728881835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EHMKTHAGAL_	ENSG00000213588|ENST00000395064|ZBTB9	51.52775601994872	0.4429225830406686	5				NaN	NaN	0	NaN	4108	3448	7557
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7559	24.31	NaN	4561.7	30	0	1082.8	0.106	+			41967	SVWHGTLSK	9	64	507.7724706542558	1013.5303883753116	2	507.77215576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVWHGTLSK_	ENSG00000136270|ENST00000258770|TBRG4;nc|ENSG00000136270|Q969Z0-2|TBRG4;TBRG4|p.L492Cfs*9|2|0.32|ENSG00000136270|chr7:45101918-45101918|G/-|frameshift_variant	101.60071028292904	0.0375685401170269	5				NaN	NaN	0	NaN	4109	3448	7557
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7560	24.312	NaN	6151.2	30	0	3556.6	0.106			+	-1	SKRTMSLSQ	9	40	351.8511630896804	1052.5316598692414	3	351.8502502441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_SKRTM(Oxidation (M))SLSQ_	REV__nc|ENSG00000196104|Q9BQ16-6|SPOCK3;REV__SPOCK3|p.R32Gfs*34|1|0.53|ENSG00000196104|chr4:167234081-167234081|C/-|frameshift_variant	28.081489160057373	0.5408112046645406	5				NaN	NaN	0	NaN	4110	3448	7557
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7561	24.313	NaN	2416.4	30	0	488.44	0.106			+	29713	PHHHGHQLHHG	11	68	647.3086202754271	1292.602687617654	2	647.3070678710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PHHHGHQLHHG_	REV__ENSG00000102804|ENST00000458659|TSC22D1;REV__nc|ENSG00000102804|Q15714-4|TSC22D1;REV__TSC22D1|p.F419Sfs*26|1|0.15|ENSG00000102804|chr13:44574821-44574822|-/AT|frameshift_variant;REV__TSC22D1|p.G422Vfs*22|1|0.28|ENSG00000102804|chr13:44574812-44574812|T/-|frameshift_variant;REV__TSC22D1|p.T849Nfs*19|1|0.34|ENSG00000102804|chr13:44573531-44573532|-/G|frameshift_variant	36.31764250033197	0.6083289427130232	5				NaN	NaN	0	NaN	4111	3448	7557
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7562	24.315	NaN	4851.7	30	0	481.98	0.106			+	29957	PNHGIMTSE	9	65	493.2249312719979	984.4353096107958	2	493.2239074707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PNHGIMTSE_	REV__tr|U7T3Q6|U7T3Q6_FUSNUDioldehydratasereactivasesubunitalphaOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00496PE=4SV=1	51.33545320467046	0.2872990594074956	5				NaN	NaN	0	NaN	4112	3448	7557
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7563	24.317	NaN	3991.6	30	0	553.98	0.106				-1	 	0	47	398.7744334751824	795.5343140171648	2	398.7736511230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4113	3448	7557
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7564	24.319	NaN	1988.4	30	0	239.52	0.036			+	43732	TLAALAARARG	11	62	535.8241354387555	1069.633717944311	2	535.8231811523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TLAALAARARG_	REV__ENST00000472658.1_1_1:16270204-16270420:-|nuORF;REV__ENST00000487785.1_1_1:16270204-16270866:-|nuORF	32.81241826257853	0.645615689454792	5				NaN	NaN	0	NaN	4114	3448	7557
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7578	24.349	NaN	13397	30	0	2241.8	0.214	+			3600	ASVNTLVNK	9	77	473.27265396611347	944.530754999027	2	473.2713317871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASVNTLVNK_	ARFIP1|p.K303Nfs*13|1|0.22|ENSG00000164144|chr4:152888246-152888246|A/-|frameshift_variant;ENSG00000164144|ENST00000353617|ARFIP1;nc|ENSG00000164144|P53367-2|ARFIP1;nc|ENSG00000164144|P53367-3|ARFIP1	138.06239232086	0.011389075116295402	5				NaN	NaN	0	NaN	4125	3451	7577
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7579	24.352	NaN	21115	30	0	4032.1	0.106	+			45174	TVMDKTRAL	9	72	517.7875357417145	1033.5605185502288	2	517.7868041992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVMDKTRAL_	CARD17-CASP1|1|fusion;CARD17-CASP1|2|fusion;CASP1|p.N205Ifs*7|1|0.4|ENSG00000137752|chr11:105030343-105030343|T/-|frameshift_variant;ENSG00000137752|ENST00000533400|CASP1;ENSG00000204397|ENST00000673097|CARD16;ENST00000526511.5_1_11:104901858-104905840:-|nuORF;ENST00000527065.1_1_11:104915107-104915377:-|nuORF;nc|ENSG00000137752|P29466-2|CASP1;nc|ENSG00000204397|Q5EG05|CARD16	101.25262130126117	0.03792372629710479	5				NaN	NaN	0	NaN	4126	3451	7577
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7580	24.354	NaN	17853	30	0	6436.4	0.106			+	25812	LSCVRSLSL	9	65	345.52735954938277	1033.5602492483483	3	345.5268249511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LSC(Carbamidomethyl (C))VRSLSL_	REV__ENST00000344111.3_1_7:1007687-1008335:-|nuORF	60.11826168202944	0.21262886028301267	5				NaN	NaN	0	NaN	4127	3451	7577
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7581	24.356	NaN	3495.8	30	0	662.45	0.106			+	7151	DAELSKAKK	9	58	495.28593818655463	988.5573234399093	2	495.28448486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DAELSKAKK_	REV__ENSG00000133392|ENST00000300036|MYH11;REV__nc|ENSG00000133392|P35749-2|MYH11;REV__nc|ENSG00000133392|P35749-3|MYH11;REV__nc|ENSG00000133392|P35749-4|MYH11	82.24051045832904	0.08786059719216216	5				NaN	NaN	0	NaN	4128	3451	7577
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7582	24.358	NaN	2730.2	30	0	511.72	0.106	+			25624	LQPVQFSQP	9	60	522.2771053755143	NaN	0	522.2769775390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LQPVQFSQP_	ENSG00000135100|ENST00000257555|HNF1A;HNF1A|p.H500Tfs*31|1|0.15|ENSG00000135100|chr12:120997658-120997658|C/-|frameshift_variant;nc|ENSG00000135100|P20823-2|HNF1A;nc|ENSG00000135100|P20823-7|HNF1A;nc|ENSG00000135100|P20823|HNF1A	54.776311868738084	0.17377682019723872	5				NaN	NaN	0	NaN	4129	3451	7577
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7583	24.36	NaN	2370.2	30	0	811.69	0.036			+	-1	TLHLQAMGK	9	42	338.85099893362167	1013.531167401065	3	338.8502502441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_TLHLQAM(Oxidation (M))GK_	REV__ENST00000253669.9_1_19:17170428-17179863:-|nuORF	19.1035232394073	0.6112419832031293	5				NaN	NaN	0	NaN	4130	3451	7577
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7584	24.36	NaN	1567.1	30	0	164.59	0.143	+			1358	AEVEAQKAQQL	11	59	607.8230793961078	1213.6316058590155	2	607.8220825195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AEVEAQKAQQL_	ENSG00000088325|ENST00000300403|TPX2;nc|ENSG00000088325|Q9ULW0-2|TPX2	52.167168403610894	0.39337392184041037	5				NaN	NaN	0	NaN	4131	3451	7577
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7599	24.394	NaN	2434.4	30	0	411.29	0.214			+	46563	VFKACPGL	8	56	417.7295935036724	833.4446340741448	2	417.72845458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VFKACPGL_	REV__GPR137|p.H359Pfs*4|1|0.06|ENSG00000173264|chr11:64289182-64289183|-/C|frameshift_variant	46.76643321282427	0.6143254112625767	5				NaN	NaN	0	NaN	4143	3454	7598
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7600	24.397	NaN	4489.6	30	0	1099	0.106			+	30275	PTFTFKSNL	9	46	352.189688635132	1053.547236505596	3	352.1888732910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PTFTFKSNL_	REV__tr|U7ST31|U7ST31_FUSNUOutermembraneproteinbeta-barreldomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01263PE=4SV=1	31.954861631926434	0.5046124803899898	5				NaN	NaN	0	NaN	4144	3454	7598
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7601	24.399	NaN	3978.7	30	0	655.58	0.106			+	48039	VSRYLQPR	8	66	509.7942735758985	1017.573994218597	2	509.79364013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSRYLQPR_	REV__ARHGEF17|p.G290Efs*24|1|0.14|ENSG00000110237|chr11:73309504-73309504|G/-|frameshift_variant;REV__ARHGEF17|p.M1011Sfs*2|1|0.32|ENSG00000110237|chr11:73311670-73311670|T/-|frameshift_variant;REV__ARHGEF17|p.P617Lfs*10|1|0.32|ENSG00000110237|chr11:73310482-73310482|C/-|frameshift_variant;REV__ENSG00000110237|ENST00000263674|ARHGEF17	53.351449002276354	0.5676011784961348	5				NaN	NaN	0	NaN	4145	3454	7598
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7602	24.401	NaN	2736.1	30	0	332.75	0.106				-1	 	0	52	428.2695485700156	854.5245442068313	2	428.2681579589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4146	3454	7598
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7603	24.403	NaN	2369.1	30	0	560.82	0.106				-1	 	0	39	379.74292263241875	757.4712923316375	2	379.7419128417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4147	3454	7598
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7604	24.405	NaN	3044.1	30	0	563.53	0.035				-1	 	0	37	336.53494886683	1006.58301720069	3	336.5340881347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4148	3454	7598
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7605	24.405	NaN	2564	30	0	466.58	0.142	+			7425	DERLRFKGP	9	47	373.20995779394116	1116.6080439820234	3	373.2098083496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DERLRFKGP_	ENSG00000186297|ENST00000335625|GABRA5;GABRA5|p.A356Pfs*15|1|0.24|ENSG00000186297|chr15:26943397-26943397|A/-|frameshift_variant	40.5726180659479	0.4135428067754104	5				NaN	NaN	0	NaN	4149	3454	7598
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7617	24.432	NaN	2545.9	30	0	295.15	0.214	+			28545	NIQDHNTI	8	48	477.7365778672833	953.4586028013666	2	477.7351379394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NIQDHNTI_	ENSG00000110887|ENST00000228476|DAO	56.72105179125745	0.5342425954139568	5				NaN	NaN	0	NaN	4158	3457	7616
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7618	24.436	NaN	2686.4	30	0	262.25	0.106			+	22496	KTNPWVGKELL	11	75	642.8686114871269	1283.7226700410538	2	643.3687744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTNPWVGKELL_	REV__ASB15|p.L148Ffs*2|1|0.36|ENSG00000146809|chr7:123617723-123617723|C/-|frameshift_variant;REV__ASB15|p.N141Kfs*2|1|0.32|ENSG00000146809|chr7:123617702-123617703|-/A|frameshift_variant;REV__ASB15|p.W524Lfs*15|1|0.12|ENSG00000146809|chr7:123630095-123630096|-/TGATAAAATTTAATTTAGTA|frameshift_variant;REV__ENSG00000146809|ENST00000451215|ASB15	34.50088687433636	0.6279050307224145	5				NaN	NaN	0	NaN	4159	3457	7616
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7619	24.438	NaN	3082.8	30	0	233.97	0.106			+	30415	PWLNPSCL	8	57	465.2290165279631	NaN	0	465.2270812988281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PWLNPSCL_	REV__nc|ENSG808|P60509|ERVPABLB-1	38.80614096846853	1.7418937515398478	5				NaN	NaN	0	NaN	4160	3457	7616
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7620	24.44	NaN	2067.2	30	0	169.5	0.106	+			8857	EEPWAVEEL	9	65	551.2575489566293	1100.5005449800585	2	551.2573852539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EEPWAVEEL_	ENSG00000160117|ENST00000404085|ANKLE1	44.116797842482775	0.37197099687881774	5				NaN	NaN	0	NaN	4161	3457	7616
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7621	24.442	NaN	1491	30	0	309.48	0.106				-1	 	0	45	385.27345787616	NaN	0	385.27337646484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4162	3457	7616
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7622	24.443	NaN	2436.4	30	0	242.12	0.037				-1	IAFLLAVMTL	10	47	369.88524793409954	NaN	0	369.8846740722656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_IAFLLAVM(Oxidation (M))TL_	ENSG00000184954|ENST00000327335|OR6C70	35.15202426646627	0.38475398474706135	5				NaN	NaN	0	NaN	4163	3457	7616
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7623	24.444	NaN	1203.9	30	0	130.65	0.14			+	20680	KGNSFQVTL	9	46	497.2729742356078	992.5313955380157	2	497.2719421386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KGNSFQVTL_	REV__nc|ENSG00000137054|Q9GZS1-1|POLR1E	30.317721548370564	0.5199124245378496	5				NaN	NaN	0	NaN	4164	3457	7616
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7636	24.473	NaN	3597.6	30	0	411.56	0.214				-1	MLNEKEAQQ	9	68	553.7602769949907	1105.5060010567813	2	553.7592163085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))LNEKEAQQ_	ENSG00000148334|ENST00000338961|PTGES2;ENST00000476655.5_1_9:130884882-130886033:-|nuORF;ENST00000496594.5_1_9:130885151-130886781:-|nuORF	62.107414245175825	0.1960472003779324	5				NaN	NaN	0	NaN	4174	3460	7635
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7637	24.477	NaN	2243.1	30	0	818.89	0.106	+			8207	EADKTIKVY	9	61	533.7937568722562	1065.5729608113122	2	533.7931518554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EADKTIKVY_	ENSG00000171566|ENST00000499023|PLRG1;nc|ENSG00000171566|O43660-2|PLRG1	75.04331003522576	0.118981335847003	5				NaN	NaN	0	NaN	4175	3460	7635
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7638	24.479	NaN	1514.2	30	0	262.82	0.106	+			3296	ASLSGSLSAK	10	37	460.755479042469	NaN	0	460.7554016113281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASLSGSLSAK_	ENST00000588822.1_1_17:74723429-74729181:+|nuORF;ENST00000589977.5_1_17:74725800-74729181:+|nuORF;ENST00000590964.5_1_17:74722977-74729181:+|nuORF	54.722347961057174	0.27574710963839943	5				NaN	NaN	0	NaN	4176	3460	7635
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7639	24.48	NaN	1060.9	30	0	81.137	0.106				-1	 	0	52	594.3361749949606	593.3288985283606	1	594.3353881835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4177	3460	7635
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7640	24.482	NaN	1797	30	0	257.46	0.106	+			34912	SAAELRHVM	9	52	507.26369158247564	NaN	0	507.2642517089844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SAAELRHVM_	CALML3|p.E115Rfs*3|1|0.35|ENSG00000178363|chr10:5525424-5525424|G/-|frameshift_variant;ENSG00000143933|ENST00000272298|CALM2;ENSG00000160014|ENST00000291295|CALM3;ENSG00000178363|ENST00000315238|CALML3;ENSG00000198668|ENST00000356978|CALM1;ENST00000482532.5_1_2:47387917-47389823:-|nuORF;ENST00000597868.5_1_19:47111871-47112407:+|nuORF	39.252832667884924	0.27938773122138094	5				NaN	NaN	0	NaN	4178	3460	7635
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7641	24.484	NaN	2175.9	30	0	712.11	0.037			+	11039	FELYGKLDY	9	61	574.2860971743748	1146.5576414155496	2	574.2852172851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FELYGKLDY_	REV__tr|U7T073|U7T073_FUSNUPhenylalanine--tRNAligasebetasubunitOS=FusobacteriumnucleatumCTI-5OX=1316586GN=pheTPE=3SV=1	26.69291269510374	0.5537881896960711	5				NaN	NaN	0	NaN	4179	3460	7635
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7642	24.485	NaN	1739.2	30	0	171.27	0.14	+			26027	LSLFLLALH	9	54	513.8197874046764	1025.6250218761527	2	513.8201293945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSLFLLALH_	VSTM2B|p.L271F|1|0.32|ENSG00000187135|chr19:29563887-29563887|C/T|missense_variant	27.882242232435846	0.5426732730940306	5				NaN	NaN	0	NaN	4180	3460	7635
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7655	24.514	NaN	2130.3	30	0	193.74	0.214			+	9611	ELMRAPAPR	9	55	520.7863808097098	1039.5582086862196	2	520.7850952148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ELMRAPAPR_	REV__ENST00000330115.3_1_3:194349151-194354396:-|nuORF	45.9519527083369	0.35044536499095585	5				NaN	NaN	0	NaN	4190	3463	7654
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7656	24.517	NaN	2418.3	30	0	213.64	0.106	+			13866	GQYGETLSLL	10	64	540.7820689285538	1079.5495849239076	2	540.7815551757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GQYGETLSLL_	ENST00000442007.1_1_6:73985509-73985899:+|nuORF	32.81241826257853	0.6118718159329168	5				NaN	NaN	0	NaN	4191	3463	7654
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7657	24.519	NaN	3969.8	30	0	499.33	0.106			+	-1	RVTKQIMIT	9	57	369.21878961172763	1104.634539435383	3	369.2183532714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_RVTKQIM(Oxidation (M))IT_	REV__ENSG00000167306|ENST00000285039|MYO5B	45.97224482568171	0.3502073465782774	5				NaN	NaN	0	NaN	4192	3463	7654
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7658	24.521	NaN	1513.8	30	0	135.21	0.106	+			48575	VTQEIVTER	9	57	537.7939890783861	NaN	0	537.7936401367188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTQEIVTER_	ENSG00000046604|ENST00000261590|DSG2	73.84112541714126	0.09248770592499547	5				NaN	NaN	0	NaN	4193	3463	7654
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7659	24.523	NaN	925.23	30	0	220.9	0.03				-1	 	0	31	333.2214837215094	664.4284145098188	2	333.22088623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4194	3463	7654
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7675	24.556	NaN	3176.7	30	0	564.62	0.214	+			23164	KVYNGILEK	9	64	532.3119557790615	1062.6093586249228	2	532.3116455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVYNGILEK_	ENSG00000109689|ENST00000467087|STIM2;ENST00000467011.5_1_4:27022655-27024615:+|nuORF;nc|ENSG00000109689|Q9P246-2|STIM2;STIM2|p.S735Lfs*9|1|0.08|ENSG00000109689|chr4:27022958-27022959|-/TGTA|frameshift_variant	104.01359247289065	0.03510646158778409	5				NaN	NaN	0	NaN	4207	3466	7674
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7676	24.559	NaN	5158.3	30	0	1008.4	0.106	+			19386	KAMEAASSL	9	52	454.23231004729615	906.4500671613923	2	454.2315979003906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KAMEAASSL_	ENSG00000109685|ENST00000508803|NSD2;nc|ENSG00000109685|O96028-3|NSD2;nc|ENSG00000109685|O96028-5|NSD2	82.7504851949679	0.08565546331141553	5				NaN	NaN	0	NaN	4208	3466	7674
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7677	24.561	NaN	4244.9	30	0	500.4	0.106	+			42201	TAAETHYTY	9	66	528.736159268253	1055.457765603306	2	528.7354125976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TAAETHYTY_	ENSG00000158773|ENST00000368021|USF1;ENST00000491629.5_1_1:161011414-161013065:-|nuORF;ENST00000529476.1_1_1:161011414-161013065:-|nuORF;nc|ENSG00000158773|P22415-2|USF1;USF1|p.G130Vfs*33|3|0.3|ENSG00000158773|chr1:161041734-161041734|C/-|frameshift_variant	79.71258880314673	0.09879134589249085	5				NaN	NaN	0	NaN	4209	3466	7674
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7678	24.563	NaN	2142	30	0	247.15	0.106				-1	 	0	51	414.24115517115587	826.4677574091118	2	414.2402648925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4210	3466	7674
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7679	24.565	NaN	2332.1	30	0	344.19	0.106			+	24562	LGMGLGSPGR	10	62	472.75342608693177	943.4922992406636	2	472.7525939941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LGMGLGSPGR_	REV__ENSG00000157927|ENST00000399583|RADIL;REV__ENST00000472999.5_1_7:4839011-4843599:-|nuORF;REV__nc|ENSG00000157927|Q96JH8-1|RADIL;REV__nc|ENSG00000157927|Q96JH8-2|RADIL;REV__nc|ENSG00000157927|Q96JH8-3|RADIL	51.19269402634007	0.44601001148513897	5				NaN	NaN	0	NaN	4211	3466	7674
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7680	24.567	NaN	2899.3	30	0	422.03	0.036			+	-1	RTQDVLMIN	9	65	553.2862029349816	1104.557852936763	2	553.759521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_RTQDVLM(Oxidation (M))IN_	REV__ENSG00000160396|ENST00000291823|HIPK4	30.317721548370564	0.5199124245378496	5				NaN	NaN	0	NaN	4212	3466	7674
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7681	24.567	NaN	12308	30	0	1092.3	0.141				-1	 	0	79	561.3144690363387	1120.6143851394772	2	561.3143310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4213	3466	7674
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7697	24.602	NaN	4560.5	30	0	824.28	0.215	+			10736	FAEDGARTV	9	53	483.23934585547477	964.4641387777496	2	483.2378234863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FAEDGARTV_	ENSG00000157240|ENST00000287934|FZD1	76.16968421966216	0.11411088698345859	5				NaN	NaN	0	NaN	4226	3469	7696
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7698	24.606	NaN	2047.5	30	0	465.51	0.106			+	-1	VTRMPRRL	8	36	348.87379616464057	1043.5995590941218	3	348.8733825683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_VTRM(Oxidation (M))PRRL_	REV__DMRTB1|p.P297Rfs*13|3|0.27|ENSG00000143006|chr1:53464771-53464771|C/-|frameshift_variant;REV__ENSG00000143006|ENST00000371445|DMRTB1	29.14955571784316	0.7342621283720113	5				NaN	NaN	0	NaN	4227	3469	7696
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7699	24.608	NaN	1741.7	30	0	235.94	0.106			+	-1	MTLEMIANVI	10	59	575.7963256835938	NaN	0	575.7963256835938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_MTLEM(Oxidation (M))IANVI_	REV__ENSG00000136274|ENST00000490531|NACAD;REV__ENSG00000196531|ENST00000454682|NACA;REV__ENST00000419462.1_1_8:102381493-102381775:+|nuORF;REV__nc|ENSG00000196531|E9PAV3-2|NACA;REV__nc|ENSG00000196531|Q13765|NACA;REV__nc|ENSG00000228224|Q9BZK3|NACA4P	47.95952297671804	0.31850267256932663	5				NaN	NaN	0	NaN	4228	3469	7696
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7700	24.61	NaN	2929.7	30	0	225.73	0.106	+			29146	NVATKQCVPE	10	69	544.7733887316294	1087.5322245300588	2	544.7728271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NVATKQCVPE_	ENSG00000260691|ENST00000562196|ANKRD20A1;nc|ENSG00000172014|Q4UJ75|ANKRD20A4P;nc|ENSG00000276203|Q5VUR7|ANKRD20A3P;nc|ENSG00000291287|Q5SQ80|ANKRD20A2P	36.31764250033197	0.5830761606467809	5				NaN	NaN	0	NaN	4229	3469	7696
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7701	24.612	NaN	1579.7	30	0	165.33	0.106	+			5717	AVFKGIAADK	10	64	510.298922110592	1018.583291287984	2	510.2979431152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVFKGIAADK_	ENSG00000275066|ENST00000612223|SYNRG;nc|ENSG00000275066|Q9UMZ2-3|SYNRG;nc|ENSG00000275066|Q9UMZ2-4|SYNRG;nc|ENSG00000275066|Q9UMZ2-5|SYNRG;nc|ENSG00000275066|Q9UMZ2-6|SYNRG;nc|ENSG00000275066|Q9UMZ2-7|SYNRG;nc|ENSG00000275066|Q9UMZ2-8|SYNRG;nc|ENSG00000275066|Q9UMZ2-9|SYNRG;SYNRG|p.N610Tfs*3|2|0.33|ENSG00000275066|chr17:37553894-37553894|T/-|frameshift_variant	65.15724298150197	0.31893571707528906	5				NaN	NaN	0	NaN	4230	3469	7696
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7702	24.613	NaN	863.72	30	0	120.59	0.034	+			9071	EGGRDAISI	9	35	459.2374826852119	NaN	0	459.2372741699219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EGGRDAISI_	ENSG00000158887|ENST00000533357|MPZ;nc|ENSG00000158887|P25189-2|MPZ	40.77816245573522	0.2702456086868081	5				NaN	NaN	0	NaN	4231	3469	7696
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7703	24.614	NaN	1765.6	30	0	166.25	0.139			+	23804	LCPGMRVLS	9	60	488.2591191652149	974.5036853972298	2	488.2584228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LCPGMRVLS_	REV__ENST00000463863.5_1_3:150276179-150276254:+|nuORF	51.33545320467046	0.2872990594074956	5				NaN	NaN	0	NaN	4232	3469	7696
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7721	24.653	NaN	27234	30	0	4574.2	0.214			+	29131	NVAADIVGNLC	11	84	544.7733887316294	1087.5322245300588	2	544.772216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NVAADIVGNLC_	REV__DOCK3|p.P1852Qfs*45|14|0.4|ENSG00000088538|chr3:51380173-51380173|C/-|frameshift_variant;REV__DOCK3|p.P1852Sfs*46|1|0.25|ENSG00000088538|chr3:51380173-51380174|CC/-|frameshift_variant;REV__ENSG00000088538|ENST00000266037|DOCK3;REV__ENSG00000128512|ENST00000428084|DOCK4;REV__nc|ENSG00000128512|Q8N1I0-2|DOCK4;REV__nc|ENSG00000128512|Q8N1I0|DOCK4	61.76455937419982	0.30770400073182314	5				NaN	NaN	0	NaN	4247	3472	7720
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7722	24.657	NaN	50242	30	0	14360	0.106				-1	 	0	67	363.51787964468264	1087.531809534248	3	363.5170593261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4248	3472	7720
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7723	24.659	NaN	9297.1	30	0	3648	0.106			+	6071	AVMVPMHGVL	10	70	527.2831584912961	1052.5517640493922	2	527.282470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVMVPMHGVL_	REV__ARHGEF10|p.E997Gfs*16|1|0.43|ENSG00000104728|chr8:1928644-1928644|A/-|frameshift_variant;REV__ARHGEF10|p.P976Rfs*8|1|0.14|ENSG00000104728|chr8:1928577-1928577|C/-|frameshift_variant;REV__ENSG00000104728|ENST00000349830|ARHGEF10;REV__ENST00000523711.5_1_8:1824717-1874701:+|nuORF;REV__nc|ENSG00000104728|O15013-4|ARHGEF10;REV__nc|ENSG00000104728|O15013-6|ARHGEF10;REV__nc|ENSG00000104728|O15013-7|ARHGEF10;REV__nc|ENSG00000104728|O15013|ARHGEF10	35.200714571348534	0.5923680232273616	5				NaN	NaN	0	NaN	4249	3472	7720
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7724	24.661	NaN	4189	30	0	850.23	0.106			+	2387	ANSEVCLPNEL	11	58	594.7814473487259	1187.5483417642517	2	594.780517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ANSEVCLPNEL_	REV__ENSG00000196632|ENST00000354646|WNK3;REV__nc|ENSG00000196632|Q9BYP7-4|WNK3;REV__WNK3|p.N1685Tfs*71|1|0.19|ENSG00000196632|chrX:54202010-54202010|T/-|frameshift_variant	42.86426827375447	0.5187511139693657	5				NaN	NaN	0	NaN	4250	3472	7720
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7725	24.662	NaN	5145.3	30	0	2948	0.106				-1	 	0	51	435.24668858655457	868.4788242399092	2	435.2453918457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4251	3472	7720
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7726	24.664	NaN	2960.8	30	0	565.07	0.034	+			17146	HSTLPEAPA	9	53	461.7357234289897	921.4568939247794	2	461.73468017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HSTLPEAPA_	ENSG00000166450|ENST00000389286|PRTG	30.503639358989545	0.5181749237905803	5				NaN	NaN	0	NaN	4252	3472	7720
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7727	24.665	NaN	5807.5	30	0	1052.9	0.138				-1	 	0	62	438.21765212807696	874.420751322954	2	438.21630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4253	3472	7720
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7740	24.695	NaN	17430	30	0	3238.9	0.214	+			42552	TASAVVQHM	9	73	472.2375110848478	942.4604692364957	2	472.2366638183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TASAVVQHM_	ENSG00000115524|ENST00000335508|SF3B1	118.74307786436346	0.02196067127630568	5				NaN	NaN	0	NaN	4263	3475	7739
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7741	24.698	NaN	11269	30	0	1189.7	0.106	+			24341	LFLEHHGNLS	10	76	583.8018788837818	1165.5892048343635	2	583.8009033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LFLEHHGNLS_	ENST00000393630.7_1_12:62931442-62931897:+|nuORF	106.88024417677582	0.05726438866303799	5				NaN	NaN	0	NaN	4264	3475	7739
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7742	24.7	NaN	4490.2	30	0	488.12	0.106	+			41726	SVSEVVVNR	9	59	494.77545480796107	987.5363566827222	2	494.7744445800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVSEVVVNR_	ENSG00000099821|ENST00000588649|POLRMT;ENST00000578759.1_1_17:60217316-60217976:-|nuORF	93.1432384553994	0.056003526918089595	5				NaN	NaN	0	NaN	4265	3475	7739
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7743	24.702	NaN	17285	30	0	4982.8	0.106				-1	 	0	68	389.53697392390745	1165.5890923719223	3	389.5361022949219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4266	3475	7739
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7744	24.704	NaN	5893.4	30	0	1204.9	0.106	+			21575	KPFSNTEKI	9	67	532.2934516277002	1062.5723503222002	2	532.7906494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KPFSNTEKI_	ENSG00000150667|ENST00000350221|FSIP1	64.20726635412375	0.17854274437659667	5				NaN	NaN	0	NaN	4267	3475	7739
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7745	24.706	NaN	4596.3	30	0	1628.8	0.106	+			23694	LATDNAIDILG	11	56	372.5366516113281	NaN	0	372.5366516113281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LATDNAIDILG_	ENSG00000006788|ENST00000252172|MYH13;MYH13|p.K1396Nfs*37|1|0.46|ENSG00000006788|chr17:10312751-10312751|T/-|frameshift_variant	29.550750289552195	0.43372083775723597	5				NaN	NaN	0	NaN	4268	3475	7739
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7746	24.707	NaN	2989.3	30	0	406.08	0.034				-1	 	0	60	480.280784301234	958.547015669268	2	480.2794494628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4269	3475	7739
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7759	24.735	NaN	16434	30	0	1999.5	0.214				-1	 	0	73	472.2830468231297	942.5515407130595	2	472.28173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4279	3478	7758
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7760	24.738	NaN	2849.7	30	0	293.02	0.106	+			8550	EAVKQYSSY	9	61	537.7600333887035	1073.505513844207	2	537.7590942382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EAVKQYSSY_	ENSG00000170525|ENST00000379775|PFKFB3;nc|ENSG00000170525|Q16875-2|PFKFB3;nc|ENSG00000170525|Q16875-3|PFKFB3;nc|ENSG00000170525|Q16875-4|PFKFB3	90.36981228632155	0.0638227155548745	5				NaN	NaN	0	NaN	4280	3478	7758
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7761	24.74	NaN	3384	30	0	546.23	0.106	+			43661	TIWGRPGGAAL	11	64	549.8057297521499	1097.5969065710997	2	549.8047485351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TIWGRPGGAAL_	ENST00000261192.11_1_12:25102083-25102185:-|nuORF	36.446750945000026	0.6065623449959539	5				NaN	NaN	0	NaN	4281	3478	7758
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7762	24.742	NaN	2927.5	30	0	409.63	0.106			+	-1	KDKMCCVLRS	10	74	620.3032727305084	1238.5919925278167	2	620.3019409179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_KDKMC(Carbamidomethyl (C))CVLRS_	REV__ENST00000515717.1_1_4:122590675-122593697:-|nuORF	54.722347961057174	0.4138398245444204	5				NaN	NaN	0	NaN	4282	3478	7758
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7763	24.744	NaN	1644.3	30	0	385.59	0.106	+			48978	VVGGLDIHK	9	49	469.27660796639304	NaN	0	469.2765808105469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVGGLDIHK_	ENSG00000221823|ENST00000234310|PPP3R1	54.776311868738084	0.17377682019723872	5				NaN	NaN	0	NaN	4283	3478	7758
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7764	24.746	NaN	3563.5	30	0	878.85	0.106				-1	 	0	54	482.75955691324896	963.5045608932979	2	482.7579650878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4284	3478	7758
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7765	24.747	NaN	1424.4	30	0	206.54	0.038			+	-1	ILCVTSNIRK	10	52	623.3503123062868	1244.6860716793735	2	623.3490600585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))ILC(Carbamidomethyl (C))VTSNIRK_	REV__ENST00000446421.2_1_9:104817825-104817921:-|nuORF	34.172542307311794	0.6007644933930345	5				NaN	NaN	0	NaN	4285	3478	7758
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7779	24.777	NaN	9440.1	30	0	2200.9	0.214				-1	 	0	73	404.7200030099691	807.4254530867382	2	404.7191467285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4296	3481	7778
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7780	24.781	NaN	6915.6	30	0	1273.1	0.106	+			18322	IPTKQTQTF	9	69	532.2934516277002	1062.5723503222002	2	532.2933959960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IPTKQTQTF_	ENSG00000109971|ENST00000534624|HSPA8;ENSG00000126803|ENST00000247207|HSPA2;ENSG00000173110|ENST00000309758|HSPA6;ENST00000397642.3_1_1:247394123-247394771:+|nuORF;ENST00000425843.1_1_X:120337248-120337797:-|nuORF;ENST00000445535.1_1_1:161576981-161578004:+|nuORF;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;ENST00000552265.2_1_12:111822376-111823062:+|nuORF;HSPA6|p.D632Gfs*9|1|0.12|ENSG00000173110|chr1:161526547-161526548|-/G|frameshift_variant;HSPA8|p.K569Dfs*6|1|0.3|ENSG00000109971|chr11:123058302-123058303|TC/-|frameshift_variant;nc|ENSG00000109971|P11142-2|HSPA8	126.24258497203832	0.01742065577488747	5				NaN	NaN	0	NaN	4297	3481	7778
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7781	24.783	NaN	2286.3	30	0	258.8	0.106	+			7872	DRILCDVPCSG	11	66	617.7823871793795	1233.550221425559	2	617.78125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_DRILCDVPC(Carbamidomethyl (C))SG_	ENSG00000037474|ENST00000264670|NSUN2;nc|ENSG00000037474|Q08J23-2|NSUN2;nc|ENSG00000037474|Q08J23-3|NSUN2;NSUN2|p.F423Lfs*6|1|0.21|ENSG00000037474|chr5:6609880-6609880|A/-|frameshift_variant;NSUN2|p.S339Vfs*17|1|0.16|ENSG00000037474|chr5:6616733-6616733|T/-|frameshift_variant;NSUN2|p.Y537Mfs*10|1|0.1|ENSG00000037474|chr5:6605401-6605401|A/-|frameshift_variant	56.43379154798735	0.3552884390983883	5				NaN	NaN	0	NaN	4298	3481	7778
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7782	24.785	NaN	3113.6	30	0	747.36	0.106			+	25220	LMTKKTSKA	9	41	336.53496660003486	1006.5830704003047	3	336.5341491699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LMTKKTSKA_	REV__ENSG00000099219|ENST00000339450|ERMP1	16.71738777980365	0.6112419832031293	5				NaN	NaN	0	NaN	4299	3481	7778
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7783	24.787	NaN	4802.3	30	0	949.95	0.106	+			26792	LVSDLRNHPV	10	61	383.88343945743543	1148.6284889725064	3	383.8825988769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LVSDLRNHPV_	ENSG00000093072|ENST00000399837|ADA2;nc|ENSG00000093072|Q9NZK5-2|ADA2	23.52269567125451	0.6877354443478558	5				NaN	NaN	0	NaN	4300	3481	7778
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7784	24.788	NaN	3147.6	30	0	299.33	0.034	+			26123	LSPKCMSPP	9	64	480.2398892243234	958.4652255154468	2	480.2378845214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSPKCMSPP_	ENST00000436123.1_1_3:24138699-24138891:-|nuORF	58.78195531508484	0.22376836668196862	5				NaN	NaN	0	NaN	4301	3481	7778
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7785	24.789	NaN	1654.6	30	0	176.88	0.139				-1	 	0	42	456.7254603764102	911.4363678196204	2	456.724365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4302	3481	7778
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7799	24.82	NaN	10395	30	0	2929	0.214	+			39941	STMGYMAAK	9	70	480.22052757002234	958.4265022068447	2	480.2193908691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STMGYMAAK_	ENSG00000080824|ENST00000216281|HSP90AA1;ENST00000436135.1_1_1:158495283-158495625:+|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1	98.62937762414208	0.04060045538121712	5				NaN	NaN	0	NaN	4313	3484	7798
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7800	24.824	NaN	3610	30	0	475.67	0.106			+	-1	GQLMQRIE	8	60	495.75501550058453	989.4954780679691	2	495.7537536621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_GQLM(Oxidation (M))QRIE_	REV__ENSG00000124535|ENST00000380773|WRNIP1;REV__nc|ENSG00000124535|Q96S55-2|WRNIP1	50.0245360154114	0.5941082100236891	5				NaN	NaN	0	NaN	4314	3484	7798
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7801	24.826	NaN	4676.6	30	0	845.45	0.106			+	40044	STNKCLSPLS	10	69	525.2676511043903	1048.5207492755806	2	525.2667846679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STNKCLSPLS_	REV__ENST00000607810.5_2_6:19803822-19804023:-|nuORF	42.86426827375447	0.522752283233888	5				NaN	NaN	0	NaN	4315	3484	7798
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7802	24.828	NaN	3509.9	30	0	1182.5	0.106			+	28586	NKKTENLVF	9	63	546.8082106400491	1091.601868346898	2	546.30908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NKKTENLVF_	REV__ENSG00000177683|ENST00000415914|THAP5;REV__nc|ENSG00000177683|Q7Z6K1-2|THAP5;REV__THAP5|p.F275Lfs*37|1|0.13|ENSG00000177683|chr7:108564554-108564554|A/-|frameshift_variant	39.252832667884924	0.4290233611298554	5				NaN	NaN	0	NaN	4316	3484	7798
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7803	24.83	NaN	1268.8	30	0	109.33	0.106	+			34308	RTLSDYNIQK	10	56	619.330322265625	NaN	0	619.330322265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RTLSDYNIQK_	ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000392399.3_1_2:137087013-137087097:-|nuORF;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000597285.1_1_19:7730614-7730836:+|nuORF;UBB|p.D191Tfs*35|2|0.18|ENSG00000170315|chr17:16382471-16382471|C/-|frameshift_variant;UBB|p.D191Tfs*35|2|0.18|ENSG00000170315|chr17:16382471-16382471|C/-|frameshift_variant	36.31764250033197	0.3809266711384728	5				NaN	NaN	0	NaN	4317	3484	7798
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7804	24.831	NaN	746.91	30	0	58.078	0.038			+	20190	KEKYTAMMKK	10	44	629.33837890625	NaN	0	629.33837890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KEKYTAMMKK_	REV__ENSG00000117118|ENST00000375499|SDHB;REV__ENST00000485092.5_1_1:17345378-17349237:-|nuORF	29.550750289552195	0.40314579734438066	5				NaN	NaN	0	NaN	4318	3484	7798
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7805	24.832	NaN	2577.6	30	0	282.6	0.141			+	47311	VNTAKENL	8	61	444.74458522720823	887.4746175212165	2	444.7424011230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VNTAKENL_	REV__ENSG00000000003|ENST00000373020|TSPAN6	60.11826168202944	0.5006107059937851	5				NaN	NaN	0	NaN	4319	3484	7798
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7822	24.869	NaN	2211.2	30	0	289.76	0.215	+			29452	PCLREDAI	8	58	458.72933529969555	NaN	0	458.729248046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PCLREDAI_	ENSG00000166432|ENST00000651725|ZMAT1;ENST00000458570.5_1_X:101149758-101187002:-|nuORF;ENST00000488347.5_1_X:101149758-101186981:-|nuORF;ZMAT1|p.I482Tfs*17|1|0.04|ENSG00000166432|chrX:101883979-101883982|CTAA/-|frameshift_variant;ZMAT1|p.Y484Tfs*16|1|0.04|ENSG00000166432|chrX:101883977-101883977|A/-|frameshift_variant	44.53106598305862	1.7418937515398478	5				NaN	NaN	0	NaN	4333	3487	7821
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7823	24.873	NaN	3336.5	30	0	1234.1	0.106	+			18659	ISVIFNVALG	10	45	344.8731443165512	NaN	0	344.8732604980469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ISVIFNVALG_	ENSG00000011454|ENST00000373647|RABGAP1;ENST00000474707.1_1_9:125835857-125839047:+|nuORF	30.317721548370564	0.4006274431774794	5				NaN	NaN	0	NaN	4334	3487	7821
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7824	24.874	NaN	2442	30	0	465.59	0.106				-1	 	0	51	419.22764630235383	836.4407396715077	2	419.2268371582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4335	3487	7821
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7825	24.876	NaN	1313.1	30	0	206.67	0.106			+	-1	MYNYAGIQ	8	43	488.2159134289837	NaN	0	488.2156982421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_M(Oxidation (M))YNYAGIQ_	REV__ENSG00000137275|ENST00000259808|RIPK1;REV__nc|ENSG00000137275|Q13546-2|RIPK1	37.15910966729921	1.7418937515398478	5				NaN	NaN	0	NaN	4336	3487	7821
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7826	24.878	NaN	1227.6	30	0	228.89	0.106				-1	AAICTTKYS	9	51	507.75015216438345	NaN	0	507.7504577636719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_AAIC(Carbamidomethyl (C))TTKYS_	LAMA5|p.E218K|1|0.21|ENSG00000130702|chr20:62352277-62352277|C/T|missense_variant	38.80614096846853	0.28164298475537564	5				NaN	NaN	0	NaN	4337	3487	7821
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7827	24.88	NaN	1107.2	30	0	154.21	0.034	+			51349	YSTGHSPAL	9	51	466.7271423339844	NaN	0	466.7271423339844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YSTGHSPAL_	ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000126464|Q9ULL5-2|PRR12;PRR12|p.P506Lfs*44|1|0.33|ENSG00000126464|chr19:49599569-49599569|C/-|frameshift_variant;PRR12|p.R352Gfs*50|1|0.13|ENSG00000126464|chr19:49597847-49597847|G/-|frameshift_variant	37.15910966729921	0.2899585034171616	5				NaN	NaN	0	NaN	4338	3487	7821
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7828	24.88	NaN	1770.5	30	0	144.86	0.141	+			5993	AVLTHSGFPAK	11	68	564.31468719006	1126.61482144692	2	564.8148803710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AVLTHSGFPAK_	ENSG00000181029|ENST00000596148|TRAPPC5	53.08895987439943	0.38514566451266113	5				NaN	NaN	0	NaN	4339	3487	7821
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7843	24.914	NaN	16853	30	0	7649.5	0.214				-1	 	0	46	322.1942412406491	642.3739295480982	2	322.1935729980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4351	3490	7842
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7844	24.917	NaN	4876.9	30	0	1758.7	0.106	+			46483	VETGVLKPG	9	62	450.2642445474681	898.5139361617362	2	450.2630920410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VETGVLKPG_	ENSG00000156508|ENST00000309268|EEF1A1;ENST00000436459.2_1_9:135895553-135896258:+|nuORF;ENST00000450915.1_1_7:88268512-88269193:+|nuORF;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	95.81516180277367	0.04847050768394289	5				NaN	NaN	0	NaN	4352	3490	7842
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7845	24.919	NaN	5488.1	30	0	295.55	0.106	+			17726	IENNHLEY	8	70	516.2440370420733	1030.4735211509465	2	516.24365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IENNHLEY_	ENSG00000188306|ENST00000340806|LRRIQ4;LRRIQ4|p.V415I|1|0.26|ENSG00000188306|chr3:169830540-169830540|G/A|missense_variant	51.33545320467046	0.5859736979383976	5				NaN	NaN	0	NaN	4353	3490	7842
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7846	24.921	NaN	2963.7	30	0	490.98	0.106	+			2271	ALWLDGTLG	9	64	473.255058365466	944.4955637977321	2	473.2529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ALWLDGTLG_	ENSG00000021300|ENST00000354190|PLEKHB1;ENST00000541760.1_1_11:73360074-73362936:+|nuORF;ENST00000544532.5_1_11:73360074-73362871:+|nuORF;nc|ENSG00000021300|Q9UF11-2|PLEKHB1;nc|ENSG00000021300|Q9UF11-3|PLEKHB1;nc|ENSG00000021300|Q9UF11-4|PLEKHB1	47.91560031466742	0.327412564698279	5				NaN	NaN	0	NaN	4354	3490	7842
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7847	24.923	NaN	2303.9	30	0	335.97	0.106	+			40177	STQSLSLQR	9	58	510.2791859396013	1018.5438189460026	2	510.2784118652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STQSLSLQR_	ENSG00000187479|ENST00000617612|C11orf96;nc|nan|Q7Z7L8|C11orf96	51.52775601994872	0.28504342437107444	5				NaN	NaN	0	NaN	4355	3490	7842
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7848	24.925	NaN	7116.1	30	0	2794.3	0.036	+			21475	KNIDTTIII	9	57	344.21003321444124	1029.6082702435237	3	344.2093200683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KNIDTTIII_	CFAP47|p.F1567Vfs*4|1|0.31|ENSG00000165164|chrX:36098829-36098830|-/G|frameshift_variant;CFAP47|p.G416Efs*26|1|0.04|ENSG00000165164|chrX:35956032-35956033|-/AATATATTTGCTTA|frameshift_variant;CFAP47|p.H2345Afs*15|1|0.09|ENSG00000165164|chrX:36236809-36236810|-/A|frameshift_variant;CFAP47|p.K734Nfs*6|1|0.13|ENSG00000165164|chrX:35971909-35971909|A/-|frameshift_variant;CFAP47|p.P2326Tfs*34|1|0.26|ENSG00000165164|chrX:36236751-36236752|-/A|frameshift_variant;ENSG00000165164|ENST00000378653|CFAP47;nc|ENSG00000165164|Q6ZTR5-1|CFAP47;nc|ENSG00000165164|Q6ZTR5-2|CFAP47;nc|ENSG00000165164|Q6ZTR5-6|CFAP47	64.20726635412375	0.17854274437659667	5				NaN	NaN	0	NaN	4356	3490	7842
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7849	24.925	NaN	1514.9	30	0	214.21	0.141	+			37891	SNYNLPMHK	9	56	552.2698012040381	1102.5250494748761	2	552.269287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SNYNLPMHK_	ENSG00000174444|ENST00000307961|RPL4;ENST00000422486.1_1_3:185135660-185136437:-|nuORF;ENST00000567229.5_1_15:66791747-66793486:-|nuORF	68.62578634547417	0.14673074753754126	5				NaN	NaN	0	NaN	4357	3490	7842
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7866	24.962	NaN	11397	30	0	983.61	0.214				-1	 	0	79	517.2625909606712	1032.5106289881423	2	517.26171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4371	3493	7865
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7867	24.966	NaN	3524.7	30	0	415.11	0.106				-1	 	0	61	505.7678029698258	1009.5210530064517	2	505.7667236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4372	3493	7865
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7868	24.968	NaN	5899.6	30	0	1354.2	0.106	+			33616	RLRWTKKA	8	69	529.8332544299893	1057.6519559267786	2	529.8323974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RLRWTKKA_	ENSG00000065057|ENST00000651570|NTHL1;ENST00000561841.1_1_16:2089927-2093675:-|nuORF;ENST00000561862.5_1_16:2089927-2090351:-|nuORF;ENST00000562951.5_1_16:2089927-2094062:-|nuORF;ENST00000565406.5_1_16:2089927-2094819:-|nuORF;ENST00000567727.5_1_16:2089927-2093790:-|nuORF;nc|ENSG00000065057|P78549-3|NTHL1;nc|ENSG00000065057|P78549|NTHL1	39.252832667884924	0.6609488554722044	5				NaN	NaN	0	NaN	4373	3493	7865
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7869	24.97	NaN	4675.4	30	0	643.14	0.106				-1	KVMRRMQK	8	72	546.8082106400491	1091.601868346898	2	546.80615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_KVMRRM(Oxidation (M))QK_	ENSG00000106633|ENST00000403799|GCK;nc|ENSG00000106633|P35557-2|GCK;nc|ENSG00000106633|P35557-3|GCK	47.91560031466742	0.6071945918984287	5				NaN	NaN	0	NaN	4374	3493	7865
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7870	24.971	NaN	1883.9	30	0	320.09	0.106	+			14132	GSLSIATEK	9	52	453.25051969097564	NaN	0	453.25030517578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GSLSIATEK_	ENSG00000110077|ENST00000528851|MS4A6A;ENST00000525549.5_1_11:59945684-59950490:-|nuORF;ENST00000529906.5_1_11:59944867-59947426:-|nuORF;ENST00000530179.1_1_11:59945684-59950490:-|nuORF;MS4A6A|p.T185Sfs*29|1|0.24|ENSG00000110077|chr11:60173125-60173126|GT/-|frameshift_variant;nc|ENSG00000110077|Q9H2W1-3|MS4A6A;nc|ENSG00000110077|Q9H2W1-5|MS4A6A;nc|ENSG00000110077|Q9H2W1|MS4A6A	78.26377905018397	0.07733306720594871	5				NaN	NaN	0	NaN	4375	3493	7865
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7871	24.973	NaN	1961.7	30	0	196.98	0.035			+	28638	NLDQFDGLK	9	56	525.2676511043903	1048.5207492755806	2	525.2673950195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NLDQFDGLK_	REV__ENSG00000115112|ENST00000263707|TFCP2L1;REV__TFCP2L1|p.Q427Sfs*18|1|0.32|ENSG00000115112|chr2:121231888-121231888|G/-|frameshift_variant	49.536043120802724	0.308405419312776	5				NaN	NaN	0	NaN	4376	3493	7865
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7872	24.974	NaN	3745.6	30	0	871.7	0.145				-1	VAKELKEMK	9	57	364.5421777238478	1090.6047037717433	3	364.5413513183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_VAKELKEM(Oxidation (M))K_	ENST00000379551.2_1_5:119800154-120021670:+|nuORF	26.69291269510374	0.5537881896960711	5				NaN	NaN	0	NaN	4377	3493	7865
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7886	25.005	NaN	17733	30	0	10220	0.214				-1	 	0	62	435.24668858655457	868.4788242399092	2	435.2455139160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4388	3496	7885
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7887	25.009	NaN	2873.7	30	0	234.66	0.106			+	30813	QEDILQLQQ	9	63	557.7908029079887	1113.5670528827773	2	557.791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QEDILQLQQ_	REV__ENSG00000162236|ENST00000294179|STX5;REV__nc|ENSG00000162236|Q13190-2|STX5;REV__nc|ENSG00000162236|Q13190-3|STX5;REV__nc|ENSG00000162236|Q13190-4|STX5	120.8684288430529	0.02067403653475984	5				NaN	NaN	0	NaN	4389	3496	7885
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7888	25.011	NaN	2861.2	30	0	477.83	0.106				-1	LKRMWYEDPFH	11	70	769.3674329273225	1536.720312921445	2	769.3656616210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_LKRM(Oxidation (M))WYEDPFH_	ENST00000477892.5_1_3:122128703-122128778:+|nuORF	17.468008924990375	0.788697330333842	5				NaN	NaN	0	NaN	4390	3496	7885
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7889	25.013	NaN	2740.5	30	0	258.53	0.106	+			909	AEIEGLKGQ	9	61	472.755745207736	NaN	0	472.7556457519531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEIEGLKGQ_	CON__H-INV:HIT000292931;CON__P05787;CON__REFSEQ:XP_092267;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;ENST00000547031.5_1_12:53292389-53294972:-|nuORF;ENST00000562317.1_1_16:78082520-78083381:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	75.04331003522576	0.0883683072398826	5				NaN	NaN	0	NaN	4391	3496	7885
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7890	25.015	NaN	2151.1	30	0	247.47	0.106			+	-1	WANDMGHPLA	10	67	564.2490806126802	1126.4836082921604	2	564.2476806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_WANDM(Oxidation (M))GHPLA_	REV__ENST00000328257.12_1_11:73964935-73965235:+|nuORF	37.81151784470057	0.569310847604193	5				NaN	NaN	0	NaN	4392	3496	7885
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7891	25.016	NaN	1583.7	30	0	208.98	0.038			+	43872	TMISNSVKKNT	11	57	611.8265421661218	1221.6385313990436	2	612.3261108398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TMISNSVKKNT_	REV__tr|U7SKV4|U7SKV4_FUSNUPolysaccharidechainlengthdeterminantN-terminaldomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01945PE=4SV=1	65.15724298150197	0.2774196309614691	5				NaN	NaN	0	NaN	4393	3496	7885
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7892	25.017	NaN	1635.3	30	0	246.16	0.141	+			37183	SIYPMHNLK	9	63	551.7909141112096	1101.5672752892192	2	551.7890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SIYPMHNLK_	VRTN|p.R194H|1|0.2|ENSG00000133980|chr14:74357364-74357364|G/A|missense_variant	51.33545320467046	0.2872990594074956	5				NaN	NaN	0	NaN	4394	3496	7885
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7906	25.049	NaN	16308	30	0	2312.9	0.214				-1	 	0	65	444.7333249680048	887.4520970028096	2	444.732177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4405	3499	7905
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7907	25.052	NaN	5691	30	0	1026.1	0.106	+			27680	MPVAMALLR	9	62	501.28615290825655	1000.5577528833131	2	501.2848205566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MPVAMALLR_	ENSG00000064313|ENST00000378164|TAF2;TAF2|p.A1003Lfs*3|1|0.21|ENSG00000064313|chr8:119746807-119746807|T/-|frameshift_variant	62.97842346883844	0.18878643064686845	5				NaN	NaN	0	NaN	4406	3499	7905
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7908	25.054	NaN	1920	30	0	204.25	0.106	+			44688	TTIEEDKSVLK	11	64	631.846441722422	1261.678330511644	2	631.8455200195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TTIEEDKSVLK_	ENSG00000183576|ENST00000331768|SETD3	109.82975700811294	0.04036548564786578	5				NaN	NaN	0	NaN	4407	3499	7905
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7909	25.056	NaN	3236.5	30	0	245.66	0.106			+	19696	KDRQLAKCL	9	66	537.808737394708	1073.602921856216	2	537.80810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KDRQLAKCL_	REV__ENST00000485119.1_1_1:229584871-229586298:-|nuORF	51.19269402634007	0.2889735674168909	5				NaN	NaN	0	NaN	4408	3499	7905
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7910	25.058	NaN	4828.8	30	0	1733.8	0.106	+			21994	KSFDTSLIRK	10	56	398.9003524942533	1193.67922808296	3	398.8996276855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KSFDTSLIRK_	ENSG00000182220|ENST00000636580|ATP6AP2;nc|ENSG00000182220|O75787-2|ATP6AP2	34.08650109265054	0.601467140718965	5				NaN	NaN	0	NaN	4409	3499	7905
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7911	25.06	NaN	3193.5	30	0	538.14	0.033	+			8388	EAMVGHEM	8	58	452.18982511694577	902.3650973006916	2	452.1883544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EAMVGHEM_	ENSG00000144802|ENST00000326172|NFKBIZ;nc|ENSG00000144802|Q9BYH8-2|NFKBIZ;nc|ENSG00000144802|Q9BYH8-3|NFKBIZ	50.0245360154114	0.5941082100236891	5				NaN	NaN	0	NaN	4410	3499	7905
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7912	25.06	NaN	2060.9	30	0	236.25	0.14	+			9783	ENRVLPMPT	9	65	528.7786650863678	1055.5427772395356	2	528.778076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ENRVLPMPT_	ENSG00000152503|ENST00000513154|TRIM36;nc|ENSG00000152503|Q9NQ86|TRIM36	34.172542307311794	0.4838870758800184	5				NaN	NaN	0	NaN	4411	3499	7905
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7926	25.092	NaN	4359.4	30	0	1052.4	0.214				-1	 	0	58	434.78128752545666	867.5480221177133	2	434.7799987792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4422	3502	7925
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7927	25.095	NaN	2825.1	30	0	277.68	0.106			+	17687	IEKTELKV	8	61	480.2934257935201	958.5722986538402	2	480.2922058105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IEKTELKV_	REV__tr|U7SRB6|U7SRB6_FUSNUFusobacteriummembraneproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01699PE=4SV=1	60.97194046774394	0.49215940876911696	5				NaN	NaN	0	NaN	4423	3502	7925
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7928	25.097	NaN	2837.7	30	0	458.89	0.106			+	-1	KIMDLTKRV	9	63	560.3308976542418	1118.6472423752834	2	560.3302001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_KIM(Oxidation (M))DLTKRV_	REV__ENSG00000166598|ENST00000299767|HSP90B1;REV__ENST00000548462.5_1_12:104324233-104336580:+|nuORF;REV__ENST00000551983.1_1_12:104335630-104337190:+|nuORF	66.42927471994793	0.16001998865088202	5				NaN	NaN	0	NaN	4424	3502	7925
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7929	25.099	NaN	2014.5	30	0	355.89	0.106			+	-1	LYASSMQH	8	56	476.71296435014256	951.4113757670851	2	476.7117004394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_LYASSM(Oxidation (M))QH_	REV__ENSG00000117000|ENST00000372771|RLF;REV__RLF|p.N1741Ifs*21|1|0.18|ENSG00000117000|chr1:40239919-40239919|A/-|frameshift_variant;REV__RLF|p.V1739Kfs*12|1|0.09|ENSG00000117000|chr1:40239916-40239917|TG/-|frameshift_variant	33.51558372728122	0.7005509609380386	5				NaN	NaN	0	NaN	4425	3502	7925
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7930	25.101	NaN	1706.3	30	0	140.27	0.106	+			45680	VAAAVEIKIN	10	54	514.3118168850643	1026.6090808369286	2	514.3114013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VAAAVEIKIN_	ENSG00000163406|ENST00000489711|SLC15A2;nc|ENSG00000163406|Q16348-2|SLC15A2;SLC15A2|p.N718Tfs*2|1|0.11|ENSG00000163406|chr3:121940965-121940965|G/-|frameshift_variant	27.882242232435846	0.6521336255503853	5				NaN	NaN	0	NaN	4426	3502	7925
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7931	25.103	NaN	3148.8	30	0	646.03	0.037	+			26953	LYHCSRLLL	9	37	373.21013992093407	NaN	0	373.21087646484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LYHCSRLLL_	ENSG00000039523|ENST00000042381|RIPOR1;ENST00000569733.6_1_16:67575293-67580037:+|nuORF;nc|ENSG00000039523|Q6ZS17-3|RIPOR1;nc|ENSG00000039523|Q6ZS17-4|RIPOR1;nc|ENSG00000039523|Q6ZS17|RIPOR1	21.9598887501803	0.3626577482100488	5				NaN	NaN	0	NaN	4427	3502	7925
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7932	25.103	NaN	1039.5	30	0	116.03	0.141			+	23308	KYPREEHL	8	59	536.2832151964524	NaN	0	536.2831420898438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KYPREEHL_	REV__ENSG00000160908|ENST00000337673|ZNF394	29.14955571784316	1.7418937515398478	5				NaN	NaN	0	NaN	4428	3502	7925
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7947	25.136	NaN	17018	30	0	3730.8	0.215			+	29196	NVMQVNKIV	9	72	522.7966925004765	1043.578832067753	2	522.7958374023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NVMQVNKIV_	REV__ENSG00000155085|ENST00000424296|AK9	63.30626980617807	0.18605348971131092	5				NaN	NaN	0	NaN	4440	3505	7946
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7948	25.139	NaN	5910.8	30	0	863.14	0.106			+	43756	TLFVLIAVV	9	65	487.81713118526795	973.6197094373359	2	487.815673828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TLFVLIAVV_	REV__ENSG00000138172|ENST00000260743|CALHM2	47.91560031466742	0.327412564698279	5				NaN	NaN	0	NaN	4441	3505	7946
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7949	25.141	NaN	4134	30	0	637.84	0.106	+			18323	IPTKQTQTF	9	69	532.2934516277002	1062.5723503222002	2	532.2933349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IPTKQTQTF_	ENSG00000109971|ENST00000534624|HSPA8;ENSG00000126803|ENST00000247207|HSPA2;ENSG00000173110|ENST00000309758|HSPA6;ENST00000397642.3_1_1:247394123-247394771:+|nuORF;ENST00000425843.1_1_X:120337248-120337797:-|nuORF;ENST00000445535.1_1_1:161576981-161578004:+|nuORF;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;ENST00000552265.2_1_12:111822376-111823062:+|nuORF;HSPA6|p.D632Gfs*9|1|0.12|ENSG00000173110|chr1:161526547-161526548|-/G|frameshift_variant;HSPA8|p.K569Dfs*6|1|0.3|ENSG00000109971|chr11:123058302-123058303|TC/-|frameshift_variant;nc|ENSG00000109971|P11142-2|HSPA8	58.22992032128504	0.22837015374068087	5				NaN	NaN	0	NaN	4442	3505	7946
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7950	25.143	NaN	3854.3	30	0	531	0.106	+			21386	KMKVFCEVL	9	67	548.7994007962855	1095.5842486593708	2	548.7986450195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KMKVFCEVL_	ENST00000559149.5_1_15:101113500-101121059:-|nuORF;ENST00000561073.1_1_15:101116892-101121059:-|nuORF	51.33545320467046	0.2872990594074956	5				NaN	NaN	0	NaN	4443	3505	7946
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7951	25.145	NaN	2154.3	30	0	265.64	0.106	+			47380	VPHTNPPEY	9	54	527.2548629734061	1052.4951730136122	2	527.2540283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VPHTNPPEY_	ENSG00000177383|ENST00000317897|MAGEF1	52.936696900407355	0.27249468807391813	5				NaN	NaN	0	NaN	4444	3505	7946
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7952	25.147	NaN	3131.8	30	0	440.34	0.036			+	38131	SPYYHMFT	8	57	354.4851988851883	1060.433767255765	3	354.48486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_SPYYHM(Oxidation (M))FT_	REV__ADCY10|p.N1597Tfs*4|1|0.07|ENSG00000143199|chr1:167809721-167809721|T/-|frameshift_variant;REV__ADCY10|p.N743Tfs*33|1|0.32|ENSG00000143199|chr1:167854433-167854433|T/-|frameshift_variant;REV__ADCY10|p.P1022Sfs*2|1|0.28|ENSG00000143199|chr1:167837262-167837263|-/A|frameshift_variant;REV__ADCY10|p.W654*|1|0.29|ENSG00000143199|chr1:167856362-167856374|CTCCATAAATCTC/-|frameshift_variant;REV__ENSG00000143199|ENST00000367851|ADCY10;REV__nc|ENSG00000143199|Q96PN6-2|ADCY10;REV__nc|ENSG00000143199|Q96PN6-4|ADCY10	53.351449002276354	0.5676011784961348	5				NaN	NaN	0	NaN	4445	3505	7946
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7953	25.147	NaN	3724.2	30	0	593.39	0.14				-1	ASTKKVVMK	9	46	336.53496660003486	1006.5830704003047	3	336.5343322753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_ASTKKVVM(Oxidation (M))K_	CFAP47|p.F1567Vfs*4|1|0.31|ENSG00000165164|chrX:36098829-36098830|-/G|frameshift_variant;CFAP47|p.H2345Afs*15|1|0.09|ENSG00000165164|chrX:36236809-36236810|-/A|frameshift_variant;CFAP47|p.K734Nfs*6|1|0.13|ENSG00000165164|chrX:35971909-35971909|A/-|frameshift_variant;CFAP47|p.P2326Tfs*34|1|0.26|ENSG00000165164|chrX:36236751-36236752|-/A|frameshift_variant;ENSG00000165164|ENST00000378653|CFAP47;nc|ENSG00000165164|Q6ZTR5-1|CFAP47;nc|ENSG00000165164|Q6ZTR5-2|CFAP47;nc|ENSG00000165164|Q6ZTR5-6|CFAP47	19.1035232394073	0.6112419832031293	5				NaN	NaN	0	NaN	4446	3505	7946
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7965	25.175	NaN	3456.4	30	0	451.59	0.214			+	-1	CRGLATAEL	9	54	495.75501550058453	989.4954780679691	2	495.7537536621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_C(Carbamidomethyl (C))RGLATAEL_	REV__ENSG00000167962|ENST00000562103|ZNF598;REV__nc|ENSG00000167962|Q86UK7-2|ZNF598;REV__nc|ENSG00000167962|Q86UK7-3|ZNF598;REV__nc|ENSG00000167962|Q86UK7|ZNF598;REV__ZNF598|p.P646Afs*20|1|0.5|ENSG00000167962|chr16:1999075-1999076|-/G|frameshift_variant	56.72105179125745	0.24094814563026265	5				NaN	NaN	0	NaN	4455	3508	7964
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7966	25.179	NaN	8449.6	30	0	3077	0.106	+			25254	LNLHHRSP	8	68	487.27039170515405	972.5262304771081	2	487.2691955566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LNLHHRSP_	CHRNB1|p.Q341Lfs*49|1|0.23|ENSG00000170175|chr17:7454497-7454498|-/T|frameshift_variant;ENSG00000170175|ENST00000306071|CHRNB1;ENST00000573209.1_1_17:7350776-7358776:+|nuORF;nc|ENSG00000170175|P11230-2|CHRNB1	40.5726180659479	0.6527593143185008	5				NaN	NaN	0	NaN	4456	3508	7964
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7967	25.181	NaN	3038.1	30	0	310.42	0.106	+			50174	WLGLKTIAQ	9	67	515.3072726364511	1028.599992339702	2	515.3065185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_WLGLKTIAQ_	ENSG00000106479|ENST00000223210|ZNF862;nc|ENSG00000106479|O60290-2|ZNF862	79.71258880314673	0.09879134589249085	5				NaN	NaN	0	NaN	4457	3508	7964
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7968	25.183	NaN	2367.8	30	0	1274.6	0.106			+	-1	NQRMLFPLNA	10	43	610.3156958603734	1218.6168387875466	2	610.3145141601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_NQRM(Oxidation (M))LFPLNA_	REV__ENSG00000119698|ENST00000304338|PPP4R4;REV__ENST00000555690.5_1_14:94640802-94696957:+|nuORF;REV__nc|ENSG00000119698|Q6NUP7-2|PPP4R4;REV__PPP4R4|p.S250Vfs*7|1|0.39|ENSG00000119698|chr14:94237577-94237577|A/-|frameshift_variant;REV__PPP4R4|p.T186Nfs*8|1|0.1|ENSG00000119698|chr14:94233689-94233690|-/A|frameshift_variant	26.69291269510374	0.6618461711292317	5				NaN	NaN	0	NaN	4458	3508	7964
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7969	25.184	NaN	2634.3	30	0	483.33	0.106	+			18767	ITNSRPPC	8	57	444.2236306700032	NaN	0	444.2234802246094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ITNSRPPC_	ENSG00000141741|ENST00000394231|MIEN1;FBXL20-MIEN1|1|fusion	44.116797842482775	1.7418937515398478	5				NaN	NaN	0	NaN	4459	3508	7964
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7970	25.186	NaN	2494.3	30	0	415.05	0.106	+			12987	GETSTVEKL	9	51	482.25212457196966	NaN	0	482.25299072265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GETSTVEKL_	ENSG00000104825|ENST00000313582|NFKBIB;ENST00000509705.3_1_19:39390655-39398344:+|nuORF;nc|ENSG00000104825|Q15653-2|NFKBIB;NFKBIB|p.E300*|1|0.38|ENSG00000104825|chr19:38907586-38907587|-/A|frameshift_variant	63.53385203322761	0.134247007536971	5				NaN	NaN	0	NaN	4460	3508	7964
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7971	25.188	NaN	4539.4	30	0	1560.1	0.038	+			43582	TIFSALENDPL	11	50	407.2129979468099	1218.6171644406297	3	407.21173095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TIFSALENDPL_	ENSG00000087008|ENST00000356406|ACOX3;nc|ENSG00000087008|O15254-2|ACOX3	22.561587123415745	0.7531385481947795	5				NaN	NaN	0	NaN	4461	3508	7964
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7984	25.216	NaN	29347	30	0	4049.5	0.214				-1	 	0	59	483.2573004369206	964.5000479406413	2	483.2559509277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4471	3511	7983
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7985	25.22	NaN	3548.9	30	0	608.91	0.106				-1	 	0	51	429.7098563093866	857.4051596855733	2	429.7086486816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4472	3511	7983
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7986	25.221	NaN	13295	30	0	4556.1	0.106			+	15345	GTVLHKNMNI	10	55	376.20587762587303	1125.5958034778191	3	376.20489501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTVLHKNMNI_	REV__ENSG00000100483|ENST00000395860|VCPKMT;REV__ENST00000484763.1_1_14:50582563-50582965:-|nuORF;REV__nc|ENSG00000100483|Q9H867-1|VCPKMT;REV__nc|ENSG00000100483|Q9H867-2|VCPKMT;REV__nc|ENSG00000100483|Q9H867-5|VCPKMT	44.116797842482775	0.5112108506279902	5				NaN	NaN	0	NaN	4473	3511	7983
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7987	25.223	NaN	4988.3	30	0	902.03	0.106	+			15320	GTVIHFNNPK	10	71	563.8054084844899	1125.5962640357798	2	563.8050537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTVIHFNNPK_	ENSG00000134717|ENST00000313334|BTF3L4;ENSG00000145741|ENST00000380591|BTF3;nc|ENSG00000134717|Q96K17-2|BTF3L4;nc|ENSG00000145741|P20290-2|BTF3	106.68306549817024	0.05784995512091477	5				NaN	NaN	0	NaN	4474	3511	7983
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7988	25.225	NaN	4622.7	30	0	442.24	0.106	+			36101	SEKHIEVEV	9	65	535.2810575958534	1068.5475622585068	2	535.280029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SEKHIEVEV_	ENSG00000130935|ENST00000253247|NOL11;ENST00000583108.5_1_17:65733207-65733809:+|nuORF	69.6276240434122	0.14239879520340665	5				NaN	NaN	0	NaN	4475	3511	7983
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7989	25.227	NaN	1673.2	30	0	154.08	0.106	+			23451	LADVEKKE	8	48	466.2589222692861	930.5032916053722	2	466.25799560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LADVEKKE_	ENSG00000072840|ENST00000264956|EVC;EVC|p.V948Cfs*22|1|0.07|ENSG00000072840|chr4:5810394-5810394|G/-|frameshift_variant	53.351449002276354	0.5676011784961348	5				NaN	NaN	0	NaN	4476	3511	7983
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	7990	25.229	NaN	1648	30	0	361.33	0.033			+	-1	ACIANLKL	8	50	451.757952250954	NaN	0	451.75799560546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_AC(Carbamidomethyl (C))IANLKL_	REV__CASZ1|p.Y1191*|1|0.04|ENSG00000130940|chr1:10646251-10646251|G/-|frameshift_variant;REV__ENSG00000130940|ENST00000377022|CASZ1;REV__ENST00000478728.2_1_1:10720866-10753946:-|nuORF;REV__ENST00000496432.6_1_1:10713095-10754402:-|nuORF;REV__nc|ENSG00000130940|Q86V15-2|CASZ1	42.47446043378293	1.7418937515398478	5				NaN	NaN	0	NaN	4477	3511	7983
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8004	25.258	NaN	1825.9	30	0	633.56	0.214				-1	 	0	40	322.1942412406491	642.3739295480982	2	322.19342041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4488	3514	8003
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8005	25.262	NaN	1719.8	30	0	331.29	0.106	+			26393	LTEAPLNPK	9	53	491.7832492639156	981.5519455946312	2	491.78173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LTEAPLNPK_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000403258.1_1_6:88986231-88986483:-|nuORF;ENST00000446382.2_1_9:6834760-6835018:+|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000502306.1_1_5:15450853-15451165:+|nuORF;ENST00000567299.1_1_19:9629420-9629708:+|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;nc|ENSG00000204434|Q9BYX7|POTEKP	60.11826168202944	0.21262886028301267	5				NaN	NaN	0	NaN	4489	3514	8003
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8006	25.264	NaN	1994.6	30	0	501.28	0.106				-1	 	0	44	396.24319216456297	790.471831395926	2	396.24176025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4490	3514	8003
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8007	25.266	NaN	1567.5	30	0	311.6	0.106			+	26360	LTCATINLDPV	11	50	580.304478804876	1158.594404676552	2	580.300537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LTCATINLDPV_	REV__BDKRB1|p.I190T|1|0.06|ENSG00000100739|chr14:96264251-96264251|T/C|missense_variant	27.047317107675042	0.7060868989289394	5				NaN	NaN	0	NaN	4491	3514	8003
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8008	25.267	NaN	1797.8	30	0	217.36	0.106	+			25807	LSCIQEVR	8	52	474.2518855647415	NaN	0	474.25006103515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSCIQEVR_	ENST00000598463.5_1_19:51301262-51301442:-|nuORF	42.396135135203025	1.7418937515398478	5				NaN	NaN	0	NaN	4492	3514	8003
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8009	25.269	NaN	2127.1	30	0	485.58	0.036			+	2450	APIVPTLWQ	9	37	342.19974297940576	1023.5773995384172	3	342.19891357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_APIVPTLWQ_	REV__AluSx1_dup105715|chr19:17808831-17809133:-|1.057486810986726|0.069666496377167|3.92|481.0|1|1|sense;REV__ENST00000263035.8_1_10:12163419-12163524:+|nuORF;REV__ENST00000263960.6_1_2:198339073-198339454:+|nuORF;REV__ENST00000355192.7_1_12:65857727-65857889:+|nuORF;REV__ENST00000377038.7_1_1:10521174-10521270:-|nuORF;REV__ENST00000397718.8_1_17:62816508-62825332:-|nuORF;REV__ENST00000432648.7_1_1:39470599-39470797:+|nuORF;REV__ENST00000436697.2_2_15:55609693-55609819:-|nuORF;REV__ENST00000505730.1_1_4:1101075-1107240:-|nuORF;REV__ENST00000506123.5_1_5:54462490-54462676:+|nuORF;REV__ENST00000525941.1_1_11:784028-784256:+|nuORF;REV__ENST00000545087.1_1:2143528-2143765:-|nuORF;REV__ENST00000584585.1_1_17:62817020-62825332:-|nuORF;REV__ENST00000599373.5_1_19:19030550-19032753:+|nuORF;REV__nc|ENSG00000154721|P57087-3|JAM2;REV__nc|ENSG00000267106|K7EIQ3-2|ZNF561-AS1;REV__nc|ENSG00000267106|K7EIQ3|ZNF561-AS1	18.324413293986947	0.6112419832031293	5				NaN	NaN	0	NaN	4493	3514	8003
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8010	25.27	NaN	1798.4	30	0	142.68	0.141	+			1874	AILLPQPSLV	10	61	525.8331909179688	NaN	0	525.8331909179688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AILLPQPSLV_	nc|ENSG00000135297|Q9Y2Z2-6|MTO1	30.503639358989545	0.4000169810673414	5				NaN	NaN	0	NaN	4494	3514	8003
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8025	25.303	NaN	7560.5	30	0	1678	0.215	+			39953	STMGYMMAK	9	66	518.2196427230683	1034.4247325129365	2	518.2191772460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_STMGYMM(Oxidation (M))AK_	ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;ENST00000518337.1_1_8:74128289-74128592:-|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P	104.74654710444128	0.034358562718640136	5				NaN	NaN	0	NaN	4506	3517	8024
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8026	25.307	NaN	2085.8	30	0	438.08	0.106	+			2525	APVKPGPAL	9	50	425.26434600251355	848.5141390718271	2	425.2627868652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_APVKPGPAL_	ENSG00000050165|ENST00000683431|DKK3;ENST00000526218.5_1_11:12000483-12031257:-|nuORF;ENST00000530694.5_1_11:12023362-12031257:-|nuORF;ENST00000533900.1_1_11:12023572-12030129:-|nuORF;ENST00000534479.5_1_11:12023699-12030797:-|nuORF	57.81127852772723	0.2318599694398087	5				NaN	NaN	0	NaN	4507	3517	8024
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8027	25.309	NaN	4648.9	30	0	412.43	0.106	+			43227	TEVLKTHGL	9	60	499.288617450556	996.562681967912	2	499.2871398925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TEVLKTHGL_	ENSG00000142541|ENST00000391857|RPL13A	83.6470233535746	0.08277643980271215	5				NaN	NaN	0	NaN	4508	3517	8024
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8028	25.311	NaN	4775.6	30	0	2256.8	0.106	+			11588	FPQSPLQIPQS	11	47	414.5569916037823	1240.649145411547	3	414.5559387207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FPQSPLQIPQS_	ENSG00000155495|ENST00000285879|MAGEC1;MAGEC1|p.E734Rfs*11|1|0.55|ENSG00000155495|chrX:141907600-141907600|G/-|frameshift_variant;MAGEC1|p.V912Gfs*44|1|0.44|ENSG00000155495|chrX:141908132-141908133|-/A|frameshift_variant	33.03940026070387	0.6432348334061824	5				NaN	NaN	0	NaN	4509	3517	8024
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8029	25.312	NaN	7862.8	30	0	1626.4	0.106	+			33001	REFGANDNM	9	67	527.2255269270497	1052.4365009208993	2	527.2249145507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_REFGANDNM_	ENSG00000162896|ENST00000356495|PIGR	86.88156770896713	0.07365720931774442	5				NaN	NaN	0	NaN	4510	3517	8024
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8030	25.314	NaN	1466.6	30	0	358.31	0.035	+			22993	KVSDSFSKE	9	53	513.7597171306772	1025.5048813281544	2	513.7592163085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KVSDSFSKE_	ENST00000583270.1_1_18:46623573-46623861:-|nuORF	35.61828744233558	0.47037581924408073	5				NaN	NaN	0	NaN	4511	3517	8024
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8031	25.315	NaN	2945.5	30	0	484.79	0.141	+			22767	KVFAGYYTK	9	67	538.7938914988623	1075.5732300645245	2	538.7925415039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KVFAGYYTK_	ENSG00000152952|ENST00000282903|PLOD2;nc|ENSG00000152952|O00469-3|PLOD2;nc|ENSG00000152952|O00469|PLOD2;PLOD2|p.N725Mfs*11|1|0.12|ENSG00000152952|chr3:146070757-146070757|T/-|frameshift_variant	44.377184641726394	0.36891676396732553	5				NaN	NaN	0	NaN	4512	3517	8024
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8047	25.35	NaN	11654	30	0	4104.4	0.214				-1	 	0	63	478.2652452208676	954.5159375085352	2	478.26397705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4525	3520	8046
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8048	25.353	NaN	7871.3	30	0	846.71	0.106	+			10747	FAEGQGRAL	9	64	474.7505621067129	947.4865712802258	2	474.74981689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FAEGQGRAL_	ENSG00000103335|ENST00000301015|PIEZO1;PIEZO1|p.A2395Pfs*117|1|0.37|ENSG00000103335|chr16:88716061-88716067|CCCCGCA/-|frameshift_variant;PIEZO1|p.F1977Lfs*33|1|0.38|ENSG00000103335|chr16:88720403-88720403|A/-|frameshift_variant	65.46538089061403	0.16805504838372562	5				NaN	NaN	0	NaN	4526	3520	8046
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8049	25.355	NaN	9125.5	30	0	1477.3	0.106			+	30860	QEHREEKQ	8	65	542.2616228685912	1082.5086928039823	2	542.2615966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QEHREEKQ_	REV__TCHH|p.E430K|1|0.34|ENSG00000159450|chr1:152111929-152111929|C/T|missense_variant	45.9519527083369	0.6193794311207887	5				NaN	NaN	0	NaN	4527	3520	8046
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8050	25.357	NaN	1740	30	0	732.89	0.106			+	4728	ATMISTKK	8	39	440.2516483630103	878.4887437928206	2	440.2503967285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATMISTKK_	REV__ENST00000554266.5_1_12:25348248-25356752:+|nuORF	53.351449002276354	0.5676011784961348	5				NaN	NaN	0	NaN	4528	3520	8046
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8051	25.359	NaN	3113.4	30	0	489.21	0.106	+			20698	KGPQVSSAL	9	50	443.7530277130419	NaN	0	443.75335693359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KGPQVSSAL_	AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK	51.19269402634007	0.19847346126499396	5				NaN	NaN	0	NaN	4529	3520	8046
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8052	25.361	NaN	5144.3	30	0	1647.4	0.037				-1	 	0	48	379.22983025424924	1134.6676613629477	3	379.2292175292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4530	3520	8046
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8053	25.362	NaN	2271	30	0	395.39	0.138			+	43910	TNSSSMVSV	9	49	456.2100747283954	910.4055965235908	2	456.2088623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TNSSSMVSV_	REV__ENST00000416648.1_1_3:183605526-183606234:+|nuORF	42.396135135203025	0.392153681582562	5				NaN	NaN	0	NaN	4531	3520	8046
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8066	25.391	NaN	18859	30	0	2627.3	0.214	+			40014	STMSTNGIPR	10	80	532.2645750067877	1062.5145970803753	2	532.2638549804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STMSTNGIPR_	ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF	169.6522961985778	0.0037960298186563977	5				NaN	NaN	0	NaN	4541	3523	8065
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8067	25.395	NaN	12517	30	0	690.55	0.106			+	46448	VESKGKRKMT	10	80	582.3312928817523	1162.6480328303046	2	582.3305053710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VESKGKRKMT_	REV__ENSG00000005249|ENST00000265717|PRKAR2B	42.396135135203025	0.5270658956260207	5				NaN	NaN	0	NaN	4542	3523	8065
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8068	25.397	NaN	19975	30	0	5044.4	0.106	+			12580	GEGVLTKLC	9	69	460.250851521214	918.487150109228	2	460.24951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEGVLTKLC_	ENSG00000175895|ENST00000315367|PLEKHF2;PLEKHF2|p.K73Nfs*24|1|0.1|ENSG00000175895|chr8:95154258-95154258|A/-|frameshift_variant;PLEKHF2|p.N84Mfs*13|1|0.34|ENSG00000175895|chr8:95154292-95154292|A/-|frameshift_variant	68.78682469695295	0.14603441672067394	5				NaN	NaN	0	NaN	4543	3523	8065
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8069	25.399	NaN	5012.3	30	0	2856.9	0.106				-1	 	0	57	489.2938138327483	976.5730747322966	2	489.292236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4544	3523	8065
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8070	25.4	NaN	5654.8	30	0	1684.1	0.106	+			14951	GTMKAQGVLLK	11	66	573.3398912889201	1144.66522964464	2	573.3392333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTMKAQGVLLK_	nc|ENSG00000166482|P55083-2|MFAP4	91.26522074875469	0.0935951923676557	5				NaN	NaN	0	NaN	4545	3523	8065
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8071	25.402	NaN	2723	30	0	1167.8	0.106	+			315	AAPRAPSAL	9	45	427.24916956117215	852.4837861891443	2	427.2477111816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AAPRAPSAL_	ENSG00000182158|ENST00000330387|CREB3L2;nc|ENSG00000182158|Q70SY1-2|CREB3L2	40.77816245573522	0.41113185337114944	5				NaN	NaN	0	NaN	4546	3523	8065
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8072	25.404	NaN	2935.3	30	0	1521.7	0.033			+	50922	YGPLGPVGL	9	41	436.7464900949495	871.478427256699	2	436.7451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YGPLGPVGL_	REV__COL11A1|p.G1096Vfs*102|1|0.07|ENSG00000060718|chr1:102940424-102940424|C/-|frameshift_variant;REV__COL11A1|p.N1709Ifs*76|1|0.32|ENSG00000060718|chr1:102879831-102879831|T/-|frameshift_variant;REV__COL11A1|p.T1554Rfs*33|2|0.13|ENSG00000060718|chr1:102887005-102887005|T/-|frameshift_variant;REV__COL11A2|p.G956Wfs*11|1|0.1|ENSG00000204248|chr6:33171740-33171741|-/G|frameshift_variant;REV__COL11A2|p.P811Lfs*87|1|0.54|ENSG00000204248|chr6:33173394-33173394|G/-|frameshift_variant;REV__COL5A1|p.D1172Tfs*104|1|0.22|ENSG00000130635|chr9:134810290-134810290|G/-|frameshift_variant;REV__COL5A1|p.G1351Efs*137|2|0.4|ENSG00000130635|chr9:134815605-134815605|C/-|frameshift_variant;REV__COL5A1|p.G997Afs*77|1|0.22|ENSG00000130635|chr9:134801983-134801983|C/-|frameshift_variant;REV__COL5A1|p.G997Rfs*17|1|0.4|ENSG00000130635|chr9:134801982-134801983|-/C|frameshift_variant;REV__COL5A1|p.K933Rfs*141|1|0.32|ENSG00000130635|chr9:134795309-134795309|C/-|frameshift_variant;REV__COL5A1|p.P1302Rfs*186|1|0.05|ENSG00000130635|chr9:134814030-134814030|C/-|frameshift_variant;REV__COL5A1|p.P1388Lfs*100|1|0.55|ENSG00000130635|chr9:134817061-134817061|G/-|frameshift_variant;REV__COL5A1|p.P966Lfs*108|1|0.41|ENSG00000130635|chr9:134796895-134796895|C/-|frameshift_variant;REV__COL5A3|p.P1048Lfs*96|1|0.25|ENSG00000080573|chr19:9977456-9977456|G/-|frameshift_variant;REV__ENSG00000060718|ENST00000370096|COL11A1;REV__ENSG00000080573|ENST00000264828|COL5A3;REV__ENSG00000130635|ENST00000371817|COL5A1;REV__ENSG00000204248|ENST00000341947|COL11A2;REV__nc|ENSG00000060718|P12107-2|COL11A1;REV__nc|ENSG00000060718|P12107-3|COL11A1;REV__nc|ENSG00000060718|P12107-4|COL11A1;REV__nc|ENSG00000130635|P20908-2|COL5A1;REV__nc|ENSG00000204248|P13942-2|COL11A2;REV__nc|ENSG00000204248|P13942-3|COL11A2;REV__nc|ENSG00000204248|P13942-4|COL11A2;REV__nc|ENSG00000204248|P13942-5|COL11A2;REV__nc|ENSG00000204248|P13942-6|COL11A2;REV__nc|ENSG00000204248|P13942-7|COL11A2;REV__nc|ENSG00000204248|P13942-8|COL11A2;REV__nc|ENSG00000204248|P13942|COL11A2	60.403631409065575	0.21025000616765316	5				NaN	NaN	0	NaN	4547	3523	8065
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8088	25.437	NaN	6083.8	30	0	1356.5	0.215	+			34861	RYSSMAASF	9	69	518.2327854141192	1034.4510178950384	2	518.2318725585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_RYSSM(Oxidation (M))AASF_	ENSG00000162366|ENST00000294338|PDZK1IP1	79.71258880314673	0.09879134589249085	5				NaN	NaN	0	NaN	4560	3526	8087
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8089	25.44	NaN	6957	30	0	1948.4	0.106	+			32266	QTLPNAAYNNR	11	76	631.3192355015254	1260.6239180698508	2	631.31787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QTLPNAAYNNR_	ENSG00000102837|ENST00000219022|OLFM4	112.10723106719422	0.035657131695213805	5				NaN	NaN	0	NaN	4561	3526	8087
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8090	25.442	NaN	3051.6	30	0	325.47	0.106	+			8030	DTSDDDFME	9	70	537.681548625587	1073.3485443179738	2	537.6810302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DTSDDDFME_	ENSG00000186834|ENST00000332499|HEXIM1	18.324413293986947	0.6112419832031293	5				NaN	NaN	0	NaN	4562	3526	8087
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8091	25.444	NaN	2050.2	30	0	167.01	0.106			+	-1	EFMVLEQP	8	59	504.7408142089844	NaN	0	504.7408142089844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_EFM(Oxidation (M))VLEQP_	REV__ENSG00000186448|ENST00000344387|ZNF197;REV__nc|ENSG00000186448|O14709-2|ZNF197	55.50420428727701	1.7418937515398478	5				NaN	NaN	0	NaN	4563	3526	8087
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8092	25.446	NaN	3126.1	30	0	319.5	0.106	+			9458	EKNDKDKKI	9	67	559.3147787635473	1116.6150045938946	2	559.3145751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EKNDKDKKI_	ENSG00000082805|ENST00000360905|ERC1;ENSG00000187672|ENST00000288221|ERC2;ENST00000536573.6_1_12:1213918-1353789:+|nuORF;ERC1|p.K806Efs*29|1|0.44|ENSG00000082805|chr12:1236824-1236825|-/A|frameshift_variant;ERC1|p.L811Yfs*3|1|0.08|ENSG00000082805|chr12:1236848-1236849|-/ATGTA|frameshift_variant;ERC2|p.D867Mfs*31|1|0.61|ENSG00000187672|chr3:55734885-55734885|T/-|frameshift_variant;nc|ENSG00000082805|Q8IUD2-2|ERC1;nc|ENSG00000082805|Q8IUD2-3|ERC1;nc|ENSG00000082805|Q8IUD2-4|ERC1;nc|ENSG00000082805|Q8IUD2-5|ERC1	36.446750945000026	0.4619375763483977	5				NaN	NaN	0	NaN	4564	3526	8087
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8093	25.448	NaN	1615.9	30	0	189.29	0.035			+	51149	YPADQHVSV	9	54	508.24407958984375	NaN	0	508.24407958984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YPADQHVSV_	REV__ENSG00000204348|ENST00000337523|DXO;REV__ENST00000473976.1_1_6:31937656-31938043:-|nuORF;REV__ENST00000485557.5_1_6:31937656-31938645:-|nuORF	34.172542307311794	0.30503706118289736	5				NaN	NaN	0	NaN	4565	3526	8087
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8094	25.448	NaN	1464.4	30	0	207.12	0.14	+			1801	AIFQEAVHK	9	54	521.7886446649281	1041.5627363966562	2	521.7883911132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AIFQEAVHK_	ENSG00000263528|ENST00000581977|IKBKE;IKBKE|p.R348Dfs*32|1|0.58|ENSG00000263528|chr1:206478987-206478987|C/-|frameshift_variant;nc|ENSG00000263528|Q14164-2|IKBKE	37.81151784470057	0.4459294069877048	5				NaN	NaN	0	NaN	4566	3526	8087
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8109	25.481	NaN	6203.5	30	0	1801.5	0.214			+	19374	KALQHQIVT	9	64	519.3100631311454	1036.6055733290907	2	519.3093872070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KALQHQIVT_	REV__tr|U7SLP8|U7SLP8_FUSNUV-typeATPsynthasealphachainOS=FusobacteriumnucleatumCTI-5OX=1316586GN=atpAPE=3SV=1	34.172542307311794	0.4838870758800184	5				NaN	NaN	0	NaN	4578	3529	8108
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8110	25.485	NaN	3300.6	30	0	488.58	0.106	+			28733	NNRSLDLD	8	54	473.7339690391745	945.453385145149	2	473.7327880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NNRSLDLD_	CON__P04264;CON__P12035;CON__P50446;CON__Q5XQN5;CON__Q6IFZ6;CON__Q7Z794;CON__Q8BGZ7;CON__Q922U2;ENSG00000167768|ENST00000252244|KRT1;ENSG00000186442|ENST00000417996|KRT3;ENSG00000189182|ENST00000341809|KRT77	96.19043198914106	0.25873003980794995	5				NaN	NaN	0	NaN	4579	3529	8108
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8111	25.487	NaN	2439.6	30	0	381.32	0.106			+	-1	QEMSSRLSI	9	57	533.7614724438072	1065.5083919544143	2	534.2598876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_QEM(Oxidation (M))SSRLSI_	REV__ENST00000486752.5_1_3:52350520-52422757:+|nuORF	40.77816245573522	0.41113185337114944	5				NaN	NaN	0	NaN	4580	3529	8108
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8112	25.489	NaN	2054.8	30	0	306.04	0.106	+			2074	ALASVVIHK	9	56	469.2959116867736	936.5772704403472	2	469.29473876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ALASVVIHK_	ENSG00000132436|ENST00000433017|FIGNL1;FIGNL1|p.K309Sfs*16|2|0.21|ENSG00000132436|chr7:50446362-50446362|T/-|frameshift_variant;nc|ENSG00000132436|Q6PIW4-2|FIGNL1	74.25504064058377	0.12238981753128622	5				NaN	NaN	0	NaN	4581	3529	8108
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8113	25.491	NaN	2060.2	30	0	357.77	0.106	+			6962	CPNGGSLTHTY	11	59	603.7653700203496	1205.516187107499	2	604.2660522460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_C(Carbamidomethyl (C))PNGGSLTHTY_	nc|ENSG00000198788|Q02817|MUC2	74.1650062923329	0.2010173757047072	5				NaN	NaN	0	NaN	4582	3529	8108
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8114	25.492	NaN	2069.4	30	0	860.2	0.106	+			27377	MKGIIGKM	8	43	439.25443900719233	876.4943250811847	2	439.2530517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MKGIIGKM_	ENST00000604458.1_1_2:198415366-198415393:+|nuORF	30.503639358989545	0.7238069182250283	5				NaN	NaN	0	NaN	4583	3529	8108
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8115	25.494	NaN	1394.3	30	0	388	0.035				-1	CFVDEVWS	8	50	521.2201246615766	1040.4256963899531	2	521.21923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_C(Carbamidomethyl (C))FVDEVWS_	ENSG00000136542|ENST00000259056|GALNT5	26.79610172149135	0.7524337208463756	5				NaN	NaN	0	NaN	4584	3529	8108
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8127	25.52	NaN	5376.4	30	0	551.44	0.214			+	9414	EKIIEKKN	8	67	501.3047527512941	1000.5949525693882	2	500.8060302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EKIIEKKN_	REV__tr|U7ST27|U7ST27_FUSNUCarboxyl-terminalprocessingproteaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01258PE=3SV=1	118.74307786436346	0.2363524257139583	5				NaN	NaN	0	NaN	4593	3532	8126
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8128	25.523	NaN	1035	30	0	112.31	0.106	+			50247	WPLNYGRSAH	10	54	600.799768694451	1199.584984455702	2	600.7987670898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WPLNYGRSAH_	ENST00000520757.1_1_8:96047742-96087920:+|nuORF	22.561587123415745	0.6955842451083604	5				NaN	NaN	0	NaN	4594	3532	8126
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8129	25.525	NaN	992.56	30	0	167.08	0.106				-1	VCTAKLPKQ	9	49	522.7966925004765	1043.578832067753	2	522.7948608398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_VC(Carbamidomethyl (C))TAKLPKQ_	ENSG00000132382|ENST00000254718|MYBBP1A;nc|ENSG00000132382|Q9BQG0-2|MYBBP1A	31.529811441608018	0.5085848003137583	5				NaN	NaN	0	NaN	4595	3532	8126
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8130	25.527	NaN	1669.8	30	0	323.78	0.106			+	-1	CTCMCACAC	9	48	384.7720927675229	NaN	0	384.7723388671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	4 Carbamidomethyl (C),Oxidation (M)	_C(Carbamidomethyl (C))TC(Carbamidomethyl (C))M(Oxidation (M))C(Carbamidomethyl (C))AC(Carbamidomethyl (C))AC_	REV__ENST00000544665.7_1_16:31343047-31343377:+|nuORF	5.921104790170933	0.4072763090772754	5				NaN	NaN	0	NaN	4596	3532	8126
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8131	25.529	NaN	1054	30	0	146.89	0.035			+	42762	TDSQLVCLL	9	54	496.25896156227543	NaN	0	496.26043701171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TDSQLVCLL_	REV__ENST00000395442.5_1_10:55568369-55568990:-|nuORF	35.61828744233558	0.29773779453147337	5				NaN	NaN	0	NaN	4597	3532	8126
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8137	25.543	NaN	2456.3	30	0	149.3	0.214	+			43000	TEKKIQVGL	9	68	508.3109370988516	NaN	0	508.3109130859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEKKIQVGL_	ENSG00000044090|ENST00000265348|CUL7;nc|ENSG00000044090|Q14999-2|CUL7	59.93077597824379	0.14961415694175798	5				NaN	NaN	0	NaN	4600	3535	8136
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8138	25.547	NaN	3013.2	30	0	505.05	0.106				-1	ASMKKVKSL	9	41	336.53496660003486	1006.5830704003047	3	336.8681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_ASM(Oxidation (M))KKVKSL_	ENST00000369426.9_1_1:119575536-119588262:-|nuORF	25.57405402267927	0.5642445186134241	5				NaN	NaN	0	NaN	4601	3535	8136
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8139	25.549	NaN	1403.4	30	0	198.7	0.106	+			37781	SLWRPFPA	8	52	487.2679443359375	NaN	0	487.2679443359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLWRPFPA_	ENST00000309534.10_1_3:88105133-88107287:-|nuORF;ENST00000474441.1_1_3:88107164-88107287:-|nuORF	30.503639358989545	1.7418937515398478	5				NaN	NaN	0	NaN	4602	3535	8136
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8140	25.551	NaN	2142.2	30	0	396.55	0.106				-1	CDGDDCEDDSD	11	52	434.7806373232812	NaN	0	434.78033447265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))DGDDC(Carbamidomethyl (C))EDDSD_	LRP4|p.N94del|1|0.47|ENSG00000134569|chr11:46900296-46900298|GTT/-|inframe_deletion	14.086013023434994	0.456735970842152	5				NaN	NaN	0	NaN	4603	3535	8136
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8141	25.553	NaN	1709.3	30	0	176.69	0.037	+			50004	WARARPRAGD	10	70	578.3108980808935	1154.6072432285869	2	578.3101806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_WARARPRAGD_	ENST00000334801.7_1_11:118781071-118781260:-|nuORF	54.776311868738084	0.41334902933431344	5				NaN	NaN	0	NaN	4604	3535	8136
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8151	25.575	NaN	5590.2	30	0	2868	0.214			+	13756	GQEELVQVEQ	10	70	579.7860412844663	1157.5575296357324	2	579.7860717773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GQEELVQVEQ_	REV__ARHGEF5|p.A447Qfs*7|1|0.08|ENSG00000050327|chr7:144364003-144364003|C/-|frameshift_variant;REV__ENSG00000050327|ENST00000056217|ARHGEF5;REV__ENSG00000213214|ENST00000378115|ARHGEF35	33.921630207806714	0.6028135429846169	5				NaN	NaN	0	NaN	4611	3538	8150
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8152	25.578	NaN	2195.3	30	0	277.27	0.106			+	43660	TIVRESKWTGA	11	74	624.3424808605403	1246.6704087878804	2	624.8427124023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TIVRESKWTGA_	REV__ENSG00000100116|ENST00000248924|GCAT;REV__ENST00000478203.1_1_22:38203974-38209043:+|nuORF;REV__GCAT|p.S206Pfs*47|1|0.24|ENSG00000100116|chr22:37815162-37815162|T/-|frameshift_variant;REV__nc|ENSG00000100116|O75600-2|GCAT	58.22992032128504	0.3392555181951113	5				NaN	NaN	0	NaN	4612	3538	8150
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8153	25.58	NaN	1708.5	30	0	164.09	0.106				-1	 	0	51	483.2573004369206	964.5000479406413	2	483.25634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4613	3538	8150
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8154	25.582	NaN	3558.7	30	0	335.91	0.106	+			27725	MQLGVHYSK	9	63	531.7747994073213	1061.5350458814426	2	531.2782592773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MQLGVHYSK_	ENST00000430246.6_1_14:21731784-21731862:-|nuORF;ENST00000554969.5_1_14:21731484-21731862:-|nuORF	70.8162118820467	0.13725933411854815	5				NaN	NaN	0	NaN	4614	3538	8150
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8155	25.584	NaN	2266.9	30	0	204.85	0.106			+	10809	FALPTFLGS	9	57	476.75804979126667	NaN	0	476.7585754394531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FALPTFLGS_	REV__ENST00000486743.1_1_7:143682974-143683349:+|nuORF	47.91560031466742	0.22105767942158736	5				NaN	NaN	0	NaN	4615	3538	8150
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8156	25.586	NaN	1646.4	30	0	137.07	0.106	+			5874	AVITVTANR	9	53	472.78111177967554	943.5476706261511	2	472.7799072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AVITVTANR_	ENSG00000198589|ENST00000651943|LRBA;ENST00000503716.5_1_4:151186876-151502511:-|nuORF;LRBA|p.L2590*|1|0.41|ENSG00000198589|chr4:150310342-150310342|A/-|frameshift_variant;nc|ENSG00000198589|P50851-2|LRBA;nc|ENSG00000198589|P50851|LRBA	77.31757898189308	0.1091473830098891	5				NaN	NaN	0	NaN	4616	3538	8150
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8157	25.587	NaN	1919.8	30	0	201.09	0.036			+	10165	ESVSNVALSF	10	70	526.7670781179231	1051.5196033026461	2	526.7666625976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ESVSNVALSF_	REV__ENSG00000254245|ENST00000253812|PCDHGA3;REV__nc|ENSG00000254245|Q9Y5H0-2|PCDHGA3;REV__PCDHGA3|p.A499Rfs*19|1|0.23|ENSG00000254245|chr5:141345524-141345524|G/-|frameshift_variant	69.6276240434122	0.2803623802747859	5				NaN	NaN	0	NaN	4617	3538	8150
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8168	25.613	NaN	19653	30	0	3351.4	0.214			+	19887	KEESSNKLQ	9	73	354.8520893256996	1061.5344385772987	3	354.8514709472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEESSNKLQ_	REV__ENSG00000152193|ENST00000282003|OBI1	58.22992032128504	0.22837015374068087	5				NaN	NaN	0	NaN	4625	3541	8167
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8169	25.616	NaN	11224	30	0	1834.9	0.106	+			27726	MQLGVHYSK	9	68	531.7747994073213	1061.5350458814426	2	531.7745971679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MQLGVHYSK_	ENST00000430246.6_1_14:21731784-21731862:-|nuORF;ENST00000554969.5_1_14:21731484-21731862:-|nuORF	68.84614121027924	0.14577793175421136	5				NaN	NaN	0	NaN	4626	3541	8167
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8170	25.618	NaN	3852.6	30	0	401.42	0.106	+			28139	NAKDVSVSY	9	60	491.74708250937937	981.4796120855588	2	491.74560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NAKDVSVSY_	ENSG00000173597|ENST00000310613|SULT1B1;SULT1B1|p.L192Cfs*6|2|0.23|ENSG00000173597|chr4:69733435-69733435|A/-|frameshift_variant	98.58198989935565	0.04066992115528678	5				NaN	NaN	0	NaN	4627	3541	8167
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8171	25.62	NaN	3337.6	30	0	655.16	0.106				-1	 	0	54	455.77235653558563	909.5301601379713	2	455.77130126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4628	3541	8167
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8172	25.622	NaN	2702.2	30	0	165.98	0.106				-1	 	0	58	476.2856377634927	950.5567225937854	2	476.2844543457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4629	3541	8167
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8173	25.623	NaN	2311.8	30	0	1101.5	0.106				-1	QMKWYSRCTV	10	58	659.3081958915169	1316.6018388498337	2	659.3070068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_QM(Oxidation (M))KWYSRCTV_	ENST00000497241.5_1_13:111996487-111996553:+|nuORF	39.252832667884924	0.5560298534376815	5				NaN	NaN	0	NaN	4630	3541	8167
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8174	25.625	NaN	1880.7	30	0	232.24	0.037	+			48293	VTEALKPTAAT	11	41	367.8764194027075	1100.6074288083225	3	367.8756408691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VTEALKPTAAT_	ENSG00000275183|ENST00000611161|LENG9;LENG9|p.P468Afs*7|1|0.47|ENSG00000275183|chr19:54462125-54462126|-/C|frameshift_variant	18.531049691330335	0.7837198200183355	5				NaN	NaN	0	NaN	4631	3541	8167
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8184	25.647	NaN	6005.6	30	0	663.33	0.214			+	20319	KEQEVLKK	8	70	501.3047527512941	1000.5949525693882	2	501.30279541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEQEVLKK_	REV__ENSG00000006788|ENST00000252172|MYH13	101.60071028292904	0.24979566554663588	5				NaN	NaN	0	NaN	4638	3544	8183
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8185	25.651	NaN	3026.9	30	0	357.84	0.106	+			39173	SSYLNTVQK	9	68	520.2753901099758	1038.5362272867515	2	520.2745971679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSYLNTVQK_	ENSG00000179454|ENST00000396128|KLHL28	89.02883481214508	0.06760336634167786	5				NaN	NaN	0	NaN	4639	3544	8183
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8186	25.653	NaN	1236	30	0	178.12	0.106	+			34330	RTNVVSPKL	9	57	507.3095692229737	1012.6045855127475	2	507.3083801269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RTNVVSPKL_	DNMBP|p.A657V|1|0.19|ENSG00000107554|chr10:99955504-99955504|G/A|missense_variant	29.170058357718403	0.5306379469863586	5				NaN	NaN	0	NaN	4640	3544	8183
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8187	25.655	NaN	710.91	30	0	80.525	0.106			+	-1	VIGSLQGQCMQ	11	41	590.2783813476562	NaN	0	590.2783813476562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_VIGSLQGQCM(Oxidation (M))Q_	REV__ENSG00000166147|ENST00000316623|FBN1	36.446750945000026	0.40298828388271424	5				NaN	NaN	0	NaN	4641	3544	8183
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8188	25.656	NaN	2498.5	30	0	529.46	0.106			+	18208	IMVGAQAKL	9	58	473.7726566175788	945.5307603019576	2	473.7709045410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_IM(Oxidation (M))VGAQAKL_	REV__tr|U7SJ06|U7SJ06_FUSNUPhosphoglucomutaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02050PE=3SV=1	65.80317337860623	0.1652391959156183	5				NaN	NaN	0	NaN	4642	3544	8183
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8189	25.658	NaN	2167	30	0	187.25	0.106			+	36144	SEKSPIQQL	9	60	515.2835546100702	1028.5525562869402	2	515.28125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SEKSPIQQL_	REV__ENST00000392253.2_1_2:202275976-202276645:-|nuORF	80.45461616416974	0.09558281504443908	5				NaN	NaN	0	NaN	4643	3544	8183
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8190	25.66	NaN	1162.2	30	0	85.915	0.033			+	29152	NVGCDMAL	8	50	440.1895275056303	878.3645020780606	2	440.18878173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_NVGC(Carbamidomethyl (C))DMAL_	REV__ENSG00000165140|ENST00000375326|FBP1;REV__FBP1|p.G294Efs*11|1|0.11|ENSG00000165140|chr9:94603517-94603517|C/-|frameshift_variant	44.116797842482775	0.6307669463330267	5				NaN	NaN	0	NaN	4644	3544	8183
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8208	25.697	NaN	46043	30	0	4846.6	0.214			+	-1	MNLVNAIDC	9	89	533.2381495871381	1064.461746241076	2	533.2374877929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))NLVNAIDC(Carbamidomethyl (C))_	REV__tr|U7T8B2|U7T8B2_FUSNUArsRfamilytranscriptionalregulatorOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00152PE=4SV=1	101.60071028292904	0.0375685401170269	5				NaN	NaN	0	NaN	4659	3547	8207
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8209	25.7	NaN	17407	30	0	2504.4	0.106			+	47535	VQTCGLDLPIV	11	74	579.3148523593525	1156.6151517855048	2	579.3139038085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VQTCGLDLPIV_	REV__ENSG00000135063|ENST00000303068|ENTREP1;REV__ENST00000460871.1_1_9:71990729-72006671:+|nuORF;REV__nc|ENSG00000135063|Q15884-1|ENTREP1;REV__nc|ENSG00000135063|Q15884|ENTREP1	71.87747018426188	0.2200878389444539	5				NaN	NaN	0	NaN	4660	3547	8207
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8210	25.702	NaN	11938	30	0	2984.1	0.106	+			40085	STNSFALNK	9	74	491.25441739456215	980.4942818559243	2	491.2533264160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STNSFALNK_	BPTF|p.D2844Afs*20|1|0.08|ENSG00000171634|chr17:67959766-67959767|-/C|frameshift_variant;BPTF|p.K2718Nfs*36|3|0.12|ENSG00000171634|chr17:67948150-67948150|A/-|frameshift_variant;ENSG00000171634|ENST00000306378|BPTF;ENST00000579209.1_1_17:62758032-62758825:-|nuORF;nc|ENSG00000171634|Q12830-4|BPTF;nc|ENSG00000171634|Q12830|BPTF	168.25843898104137	0.0030641937004078144	5				NaN	NaN	0	NaN	4661	3547	8207
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8211	25.704	NaN	7058.6	30	0	985.14	0.106	+			35856	SEDKKNIIL	9	68	530.3066226106669	1058.5986922881336	2	530.305908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SEDKKNIIL_	ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65623404-65625570:-|nuORF	110.11987700582712	0.028875675806141952	5				NaN	NaN	0	NaN	4662	3547	8207
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8212	25.706	NaN	3769.7	30	0	378.01	0.106	+			47790	VSIEAGSAVGK	11	62	509.2833729221144	1016.5521929110288	2	509.2823486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSIEAGSAVGK_	ENSG00000176945|ENST00000447234|MUC20;ENST00000457750.1_1_3:195341833-195346985:+|nuORF;nc|ENSG00000176945|Q8N307-3|MUC20	61.76455937419982	0.30770400073182314	5				NaN	NaN	0	NaN	4663	3547	8207
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8213	25.708	NaN	1868.2	30	0	142.6	0.037	+			34063	RSNPYYIVK	9	61	570.3155362323273	1138.6165195314545	2	570.3145751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RSNPYYIVK_	ENSG00000108055|ENST00000361804|SMC3	58.2462437865262	0.22823408064396822	5				NaN	NaN	0	NaN	4664	3547	8207
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8214	25.708	NaN	1544.2	30	0	168.38	0.14	+			28605	NKQMMPLK	8	55	495.2677972069054	988.5210414806108	2	495.2665710449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NKQMMPLK_	ENSG00000102595|ENST00000376747|UGGT2;ENST00000465196.5_1_13:96635825-96665653:-|nuORF;ENST00000467305.1_1_13:96637506-96665674:-|nuORF;UGGT2|p.N1268Ifs*10|1|0.3|ENSG00000102595|chr13:95859613-95859613|T/-|frameshift_variant	40.5726180659479	0.6527593143185008	5				NaN	NaN	0	NaN	4665	3547	8207
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8230	25.744	NaN	78881	30	0	56548	0.214				-1	 	0	65	345.2069173661823	1032.598922698747	3	345.20611572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4678	3550	8229
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8231	25.747	NaN	19255	30	0	4132.6	0.106			+	31080	QFGASVLK	8	65	425.24503449394	NaN	0	425.2447814941406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QFGASVLK_	REV__ENSG00000108384|ENST00000337432|RAD51C;REV__nc|ENSG00000108384|O43502-2|RAD51C;REV__RAD51C|p.S105*|1|0.55|ENSG00000108384|chr17:58695099-58695099|C/-|frameshift_variant	111.64827973302667	1.7418937515398478	5				NaN	NaN	0	NaN	4679	3550	8229
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8232	25.749	NaN	3967.7	30	0	746.14	0.106	+			17779	IESSVGKSL	9	62	460.2593694432895	918.504185953379	2	460.2579345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IESSVGKSL_	ENSG00000151151|ENST00000373935|IPMK	80.45461616416974	0.09558281504443908	5				NaN	NaN	0	NaN	4680	3550	8229
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8233	25.751	NaN	3463.5	30	0	383.26	0.106	+			15692	GVMVGMGQK	9	52	453.73139608623853	905.4482392392771	2	453.73016357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GVMVGMGQK_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENST00000457622.1_1_6:46172676-46173294:+|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000473016.1_1_2:74120109-74129648:+|nuORF;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000488967.5_1_10:90706975-90712518:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF	97.47269410471826	0.04379738608259218	5				NaN	NaN	0	NaN	4681	3550	8229
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8234	25.753	NaN	3003.2	30	0	418.86	0.106	+			20147	KEKPPITVV	9	58	505.81700245867273	1009.6194519841455	2	505.8157653808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEKPPITVV_	ENSG00000141127|ENST00000268835|PRPSAP2;ENSG00000161542|ENST00000446526|PRPSAP1;ENST00000472686.1_1_17:74309820-74324990:-|nuORF;ENST00000592474.1_1_17:74309820-74309979:-|nuORF;nc|ENSG00000141127|O60256-2|PRPSAP2;nc|ENSG00000141127|O60256-3|PRPSAP2;nc|ENSG00000141127|O60256-4|PRPSAP2;nc|ENSG00000161542|Q14558|PRPSAP1	47.95952297671804	0.32689736945648856	5				NaN	NaN	0	NaN	4682	3550	8229
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8235	25.755	NaN	4311.6	30	0	542.45	0.035	+			17381	IAMEKLANE	9	68	517.7631985860384	NaN	0	517.7630615234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_IAM(Oxidation (M))EKLANE_	ENSG00000119139|ENST00000377245|TJP2;nc|ENSG00000119139|Q9UDY2-2|TJP2;nc|ENSG00000119139|Q9UDY2-3|TJP2;nc|ENSG00000119139|Q9UDY2-4|TJP2;nc|ENSG00000119139|Q9UDY2-5|TJP2;nc|ENSG00000119139|Q9UDY2-6|TJP2;nc|ENSG00000119139|Q9UDY2-7|TJP2;TJP2|p.F813Sfs*12|1|0.23|ENSG00000119139|chr9:69240013-69240013|T/-|frameshift_variant;TJP2|p.T849Rfs*12|1|0.32|ENSG00000119139|chr9:69240120-69240120|A/-|frameshift_variant	56.72105179125745	0.16330365735109603	5				NaN	NaN	0	NaN	4683	3550	8229
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8236	25.755	NaN	1521.1	30	0	136.41	0.142	+			28062	NAARSQLETY	10	62	576.786376953125	NaN	0	576.786376953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NAARSQLETY_	ENSG00000168172|ENST00000307602|HOOK3;ENST00000527306.1_1_8:42752256-42852891:+|nuORF;HOOK3|p.N380Tfs*13|1|0.32|ENSG00000168172|chr8:42973302-42973302|A/-|frameshift_variant	47.95952297671804	0.31850267256932663	5				NaN	NaN	0	NaN	4684	3550	8229
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8248	25.782	NaN	7826.7	30	0	817.46	0.214	+			47617	VSAASTTSSPV	11	80	503.7555440696141	NaN	0	503.7695617675781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSAASTTSSPV_	ENSG00000205592|ENST00000454784|MUC19;nc|ENSG00000205592|Q7Z5P9-2|MUC19	67.49366992349736	0.16087260274449536	5				NaN	NaN	0	NaN	4693	3553	8247
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8249	25.786	NaN	5538.7	30	0	798.49	0.106			+	-1	CGHSPCSCSH	10	74	537.681548625587	1073.3485443179738	2	537.6817016601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_C(Carbamidomethyl (C))GHSPCSCSH_	REV__ENST00000586922.2_1_18:32864420-32870144:-|nuORF	21.9598887501803	0.7004979571547932	5				NaN	NaN	0	NaN	4694	3553	8247
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8250	25.788	NaN	6829.8	30	0	1768.7	0.106	+			12967	GETGLGKSTL	10	61	481.76165287649366	NaN	0	481.76153564453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GETGLGKSTL_	ENSG00000125354|ENST00000394610|SEPTIN6;nc|ENSG00000125354|Q14141-3|SEPTIN6;nc|ENSG00000125354|Q14141-4|SEPTIN6;nc|ENSG00000125354|Q14141|SEPTIN6	79.48907831485694	0.10197609229655238	5				NaN	NaN	0	NaN	4695	3553	8247
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8251	25.79	NaN	4846.1	30	0	790.78	0.106			+	27782	MRRDQGPGAA	10	68	529.7608796955634	1057.5072064579267	2	529.76025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MRRDQGPGAA_	REV__ENSG00000167280|ENST00000579016|ENGASE;REV__ENST00000300682.14_2_17:77078803-77082428:+|nuORF;REV__ENST00000579809.1_1_17:77080425-77082428:+|nuORF	44.377184641726394	0.5088115166961078	5				NaN	NaN	0	NaN	4696	3553	8247
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8252	25.792	NaN	5365.3	30	0	601.41	0.106	+			4664	ATLQNVLRK	9	70	521.8225488301556	NaN	0	521.822509765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATLQNVLRK_	ENSG00000108424|ENST00000290158|KPNB1;nc|ENSG00000108424|Q14974-2|KPNB1	101.45984612302182	0.018494728971010316	5				NaN	NaN	0	NaN	4697	3553	8247
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8253	25.793	NaN	2434.7	30	0	342.19	0.106				-1	LAAGTCEIVT	10	65	517.7631985860384	NaN	0	517.3062744140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_LAAGTC(Carbamidomethyl (C))EIVT_	ENSG00000219438|ENST00000402357|TAFA5;nc|ENSG00000219438|Q7Z5A7-2|TAFA5	60.97194046774394	0.22634118066553113	5				NaN	NaN	0	NaN	4698	3553	8247
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8254	25.795	NaN	4255.2	30	0	392.33	0.035	+			10060	ESGHIARIP	9	67	490.2700038042561	978.5254546753122	2	491.29010009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ESGHIARIP_	ENSG00000198889|ENST00000371126|DCAF12L1	37.15910966729921	0.4535818937225704	5				NaN	NaN	0	NaN	4699	3553	8247
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8265	25.91	NaN	8616.8	30	0	1378.4	0.214			+	42945	TEIRTGRF	8	68	490.2700038042561	978.5254546753122	2	490.2685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEIRTGRF_	REV__ENST00000549982.5_1_12:93861271-93862986:+|nuORF	55.50420428727701	0.5462892107279674	5				NaN	NaN	0	NaN	4707	3556	8264
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8266	25.913	NaN	5821.4	30	0	781.83	0.106	+			49921	VYVDKVEKM	9	65	555.7974636951398	1109.5803744570794	2	555.7968139648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYVDKVEKM_	AMOT|p.L850Cfs*59|1|0.13|ENSG00000126016|chrX:112779606-112779606|G/-|frameshift_variant;ENSG00000126016|ENST00000371959|AMOT;nc|ENSG00000126016|Q4VCS5-2|AMOT	99.01295224348159	0.040209060045561164	5				NaN	NaN	0	NaN	4708	3556	8264
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8267	25.915	NaN	5799.5	30	0	766.77	0.106	+			1214	AEQKLQQTL	9	68	529.796704568623	1057.578856204046	2	529.7958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEQKLQQTL_	ENSG00000131626|ENST00000253925|PPFIA1;nc|ENSG00000131626|Q13136-2|PPFIA1	131.61620852596164	0.014413238321579053	5				NaN	NaN	0	NaN	4709	3556	8264
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8268	25.917	NaN	2361.9	30	0	250.35	0.106	+			42001	SVYITLKK	8	60	476.2984790656294	950.5824051980588	2	476.2969970703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVYITLKK_	ENSG00000140319|ENST00000267884|SRP14;ENST00000558243.1_1_15:40330963-40331317:-|nuORF;ENST00000558527.5_1_15:40329525-40331317:-|nuORF;ENST00000559475.5_1_15:40329218-40331146:-|nuORF	40.77816245573522	0.6514838689002179	5				NaN	NaN	0	NaN	4710	3556	8264
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8269	25.919	NaN	3583.6	30	0	615.18	0.106	+			12898	GESDPMKGV	9	61	460.2140529823533	918.4135530315066	2	460.21270751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GESDPMKGV_	ENSG00000181222|ENST00000674977|POLR2A;nc|ENSG00000181222|P24928|POLR2A	67.49366992349736	0.1516260258713357	5				NaN	NaN	0	NaN	4711	3556	8264
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8270	25.921	NaN	4982.7	30	0	1103.7	0.106				-1	 	0	58	451.7334230772111	901.4522932212222	2	451.732177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4712	3556	8264
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8271	25.923	NaN	3100.5	30	0	402.15	0.034				-1	 	0	54	454.28527732638935	906.5560017195787	2	454.28399658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4713	3556	8264
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8289	25.96	NaN	16171	30	0	1909.2	0.214				-1	 	0	74	544.2757949714885	1086.537037009777	2	544.2749633789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4728	3559	8288
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8290	25.964	NaN	5126.4	30	0	1115.4	0.106	+			26592	LTVMTMTM	8	58	480.2156993724183	958.4168458116367	2	480.2142333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Oxidation (M)	_LTVM(Oxidation (M))TMTM(Oxidation (M))_	ENST00000534003.5_1_11:47776147-47786836:-|nuORF	54.76467175910256	0.5536104764165384	5				NaN	NaN	0	NaN	4729	3559	8288
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8291	25.966	NaN	3550.4	30	0	275.3	0.106				-1	 	0	63	494.2780970649278	986.5416411966556	2	494.2768859863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4730	3559	8288
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8292	25.967	NaN	3268.2	30	0	662.57	0.106	+			19981	KEHVIEAL	8	56	469.7697511624815	937.524949391763	2	469.7688903808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEHVIEAL_	ENSG00000147403|ENST00000369817|RPL10;ENST00000431607.1_1_9:119942983-119943337:-|nuORF;ENST00000444036.1_1_21:34213912-34214044:-|nuORF;ENST00000467168.5_1_X:153626860-153629039:+|nuORF;ENST00000491035.5_1_X:153628724-153629192:+|nuORF;RPL10L|p.E145K|1|0.08|ENSG00000165496|chr14:46651304-46651304|C/T|missense_variant	74.25504064058377	0.37144338840759816	5				NaN	NaN	0	NaN	4731	3559	8288
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8293	25.969	NaN	3124	30	0	983.2	0.106	+			46068	VCLMPGQGGGV	11	60	509.247052628351	1016.479552323502	2	509.2460632324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VCLMPGQGGGV_	ENST00000425254.2_1_19:37177700-37178230:-|nuORF	39.252832667884924	0.5681665794958463	5				NaN	NaN	0	NaN	4732	3559	8288
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8294	25.971	NaN	1059.6	30	0	503.02	0.03			+	45847	VALGQRHLA	9	34	322.19355023980387	NaN	0	322.193603515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VALGQRHLA_	REV__ENST00000578423.1_1_17:37213316-37264034:+|nuORF	27.882242232435846	0.3367954786602879	5				NaN	NaN	0	NaN	4733	3559	8288
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8295	25.972	NaN	2861.5	30	0	540.52	0.14				-1	 	0	42	336.53491132318095	1006.5829045697428	3	336.53448486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4734	3559	8288
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8311	26.007	NaN	2767.4	30	0	234.11	0.214			+	-1	ASASAHTALM	10	60	488.2314939147721	974.4484348963442	2	488.22991943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ASASAHTALM(Oxidation (M))_	REV__ENSG00000141568|ENST00000335255|FOXK2;REV__ENST00000473637.6_1_17:80553997-80559372:+|nuORF;REV__ENST00000529652.1_1_17:80558017-80559372:+|nuORF;REV__ENST00000571989.1_1_17:80551586-80559372:+|nuORF	39.252832667884924	0.5560298534376815	5				NaN	NaN	0	NaN	4747	3562	8310
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8312	26.01	NaN	3038.3	30	0	206.72	0.106	+			16883	HPHGLQVTY	9	64	526.2681091622202	NaN	0	526.2695922851562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HPHGLQVTY_	chr7:900613-904126|469|13.6|0.0|20.38|-|ENST00000649206|ADAP1,COX19;ENSG00000105963|ENST00000265846|ADAP1;ENST00000478000.5_1_7:938560-944975:-|nuORF;ENST00000481406.1_1_7:943651-944759:-|nuORF;nc|ENSG00000105963|O75689-2|ADAP1;nc|ENSG00000105963|O75689-3|ADAP1	60.11826168202944	0.14881452885248947	5				NaN	NaN	0	NaN	4748	3562	8310
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8313	26.012	NaN	2131.2	30	0	233.22	0.106			+	13893	GRFVAWCL	8	49	476.2474182692233	950.4802836052467	2	476.2425231933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GRFVAWCL_	REV__ENST00000257860.8_1_12:49688178-49688403:+|nuORF	46.76643321282427	0.6143254112625767	5				NaN	NaN	0	NaN	4749	3562	8310
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8314	26.014	NaN	1869.7	30	0	339.15	0.106				-1	DLMHDLVAI	9	51	521.7654219907035	1041.516291048207	2	521.761962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_DLM(Oxidation (M))HDLVAI_	ENST00000257572.5_1_12:117298148-117298622:-|nuORF	38.80614096846853	0.43426287593479557	5				NaN	NaN	0	NaN	4750	3562	8310
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8315	26.016	NaN	1828.1	30	0	339.07	0.106	+			27209	MEHAMETM	8	54	490.187446652102	NaN	0	490.18768310546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MEHAMETM_	ENSG00000197747|ENST00000368811|S100A10;ENST00000478348.1_1_1:151957748-151958706:-|nuORF;ENST00000478574.5_1_1:151956596-151958706:-|nuORF	40.5726180659479	1.7418937515398478	5				NaN	NaN	0	NaN	4751	3562	8310
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8316	26.018	NaN	3238.4	30	0	230.04	0.033				-1	 	0	60	446.74871979846444	891.4828866637289	2	446.74737548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4752	3562	8310
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8317	26.018	NaN	1965	30	0	211.55	0.139			+	43315	TGAGPRSPPS	10	49	463.7388915689533	925.4632302047066	2	463.7377624511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TGAGPRSPPS_	REV__ENST00000452919.1_1_3:238157-238912:-|nuORF	24.519189625965996	0.6795976720565101	5				NaN	NaN	0	NaN	4753	3562	8310
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8329	26.046	NaN	13776	30	0	1403	0.214	+			45757	VAEENTRVL	9	71	515.7797447963579	NaN	0	515.780029296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VAEENTRVL_	ENSG00000156256|ENST00000399976|USP16;ENST00000485067.1_1_21:30426080-30426505:+|nuORF;nc|ENSG00000156256|Q9Y5T5-2|USP16;nc|ENSG00000156256|Q9Y5T5-3|USP16;nc|ENSG00000156256|Q9Y5T5-4|USP16	66.96192283764107	0.11962625698446946	5				NaN	NaN	0	NaN	4762	3565	8328
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8330	26.05	NaN	1828.1	30	0	226.89	0.106			+	8712	EEDPRWKL	8	56	536.7743408952016	1071.534128857203	2	536.7724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EEDPRWKL_	REV__ENSG00000116747|ENST00000400968|RO60;REV__nc|ENSG00000116747|P10155-3|RO60;REV__nc|ENSG00000116747|P10155-4|RO60;REV__nc|ENSG00000116747|P10155-5|RO60	53.351449002276354	0.5676011784961348	5				NaN	NaN	0	NaN	4763	3565	8328
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8331	26.052	NaN	1191.9	30	0	146.34	0.106	+			2374	ANGILKVPA	9	53	441.7750384684764	881.5355240037528	2	441.7735290527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ANGILKVPA_	ENSG00000101444|ENST00000217426|AHCY;ENST00000480653.5_1_20:32878355-32891076:-|nuORF;nc|ENSG00000101444|P23526-2|AHCY	35.61828744233558	0.47037581924408073	5				NaN	NaN	0	NaN	4764	3565	8328
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8332	26.053	NaN	2131.8	30	0	326.32	0.106				-1	 	0	49	456.76779680773694	911.5210406822739	2	456.7663879394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4765	3565	8328
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8333	26.055	NaN	1389.6	30	0	209.48	0.106	+			43841	TLTFFLLCL	9	43	357.53723814452167	1069.589885033765	3	357.536376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TLTFFLLCL_	ENST00000392455.7_2_3:191109610-191109739:+|nuORF	35.200714571348534	0.47427825964483533	5				NaN	NaN	0	NaN	4766	3565	8328
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8334	26.057	NaN	763.86	30	0	91.966	0.106	+			2361	ANANKAQAA	9	38	429.7268371582031	NaN	0	429.7268371582031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ANANKAQAA_	ENSG00000158423|ENST00000375327|RIBC1;nc|ENSG00000158423|Q8N443-3|RIBC1	23.04248740728303	0.3589936788096251	5				NaN	NaN	0	NaN	4767	3565	8328
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8335	26.059	NaN	1873.1	30	0	189.8	0.035	+			13535	GLRVDKTVY	9	61	525.8004797015539	1049.5864064699076	2	525.8019409179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GLRVDKTVY_	ENSG00000242173|ENST00000219409|ARHGDIG	39.252832667884924	0.4290233611298554	5				NaN	NaN	0	NaN	4768	3565	8328
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8348	26.087	NaN	20975	30	0	2714.9	0.215	+			48505	VTNDGATILK	10	83	516.2907352299285	1030.5669175266569	2	516.2897338867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTNDGATILK_	ENSG00000166226|ENST00000299300|CCT2;ENST00000546859.5_1_12:69979244-69981900:+|nuORF;ENST00000550455.5_1_12:69979244-69981425:+|nuORF;ENST00000550638.5_1_12:69979244-69982049:+|nuORF;ENST00000551620.5_1_12:69979244-69983508:+|nuORF;nc|ENSG00000166226|P78371-2|CCT2	99.78786539795823	0.07832680346773438	5				NaN	NaN	0	NaN	4778	3568	8347
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8349	26.09	NaN	6473.6	30	0	1032	0.106	+			23176	KWKTVVAIF	9	68	546.3337174629585	1090.6528819927169	2	546.3330688476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KWKTVVAIF_	ENSG00000100433|ENST00000319231|KCNK10;KCNK10|p.G286Efs*14|1|0.18|ENSG00000100433|chr14:88188106-88188106|C/-|frameshift_variant;KCNK10|p.K492Rfs*13|1|0.12|ENSG00000100433|chr14:88185677-88185677|T/-|frameshift_variant;nc|ENSG00000100433|P57789-4|KCNK10;nc|ENSG00000100433|P57789|KCNK10	55.50420428727701	0.2510918378945873	5				NaN	NaN	0	NaN	4779	3568	8347
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8350	26.092	NaN	2053.5	30	0	215.39	0.106	+			24543	LGLLRWAE	8	58	479.27982410157733	956.5450952699547	2	479.2774353027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LGLLRWAE_	sp|F5HHT6|US21_HCMVMMembraneproteinUS21OS=Humancytomegalovirus(strainMerlin)OX=295027GN=US21PE=3SV=1;sp|P09723|US21_HCMVAUncharacterizedproteinHWLF2OS=Humancytomegalovirus(strainAD169)OX=10360GN=US21PE=3SV=1	55.50420428727701	0.5462892107279674	5				NaN	NaN	0	NaN	4780	3568	8347
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8351	26.094	NaN	4604.8	30	0	591.77	0.106			+	18353	IQNCLILNQ	9	76	529.7871183477624	1057.5596837623248	2	529.78662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IQNCLILNQ_	REV__MAST1|p.R413C|1|0.28|ENSG00000105613|chr19:12858610-12858610|C/T|missense_variant	79.45101966838831	0.09992237243120712	5				NaN	NaN	0	NaN	4781	3568	8347
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8352	26.096	NaN	2487.4	30	0	563.12	0.106			+	47545	VQWLLSPDEE	10	64	608.2974851501954	1214.5804173671906	2	608.2974853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VQWLLSPDEE_	REV__CACNA2D1|p.R197H|1|0.27|ENSG00000153956|chr7:82084837-82084837|C/T|missense_variant;REV__CACNA2D1|p.Y629Tfs*3|1|0.3|ENSG00000153956|chr7:81984680-81984680|A/-|frameshift_variant;REV__ENSG00000153956|ENST00000356860|CACNA2D1;REV__nc|ENSG00000153956|P54289-3|CACNA2D1;REV__nc|ENSG00000153956|P54289-4|CACNA2D1;REV__nc|ENSG00000153956|P54289-5|CACNA2D1;REV__nc|ENSG00000153956|P54289|CACNA2D1	40.05817265558897	0.5486090488315611	5				NaN	NaN	0	NaN	4782	3568	8347
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8353	26.098	NaN	1951.8	30	0	213.97	0.106			+	23781	LCLLGNCLP	9	57	473.24950866596214	944.4844643987243	2	473.24835205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LCLLGNCLP_	REV__chr15:53523322-53540662|232|17.27|0.17|6.68|-|1|TE_info:L1PA2,L1PA2_dup4399,L1,LINE,donor,+,53540662,53546677|WDR72,None|75;REV__L1PA3_dup1321|chr2:173527290-173533317:-|1.892281258594111|0.2637255971055219|2.84|482.0|274|2|anti-sense	42.47446043378293	0.39123495718708534	5				NaN	NaN	0	NaN	4783	3568	8347
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8354	26.099	NaN	3982.4	30	0	1161.9	0.032	+			46628	VGAGTISVP	9	54	400.7294335214107	NaN	0	400.72930908203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VGAGTISVP_	ENST00000357066.7_1_19:2071060-2071678:-|nuORF	44.53106598305862	0.24438232876904814	5				NaN	NaN	0	NaN	4784	3568	8347
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8367	26.127	NaN	20840	30	0	6384.4	0.214				-1	 	0	73	401.24588803455924	800.4772231359185	2	401.2451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4794	3571	8366
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8368	26.13	NaN	4562.1	30	0	823.99	0.106	+			44882	TTVPHVFSK	9	67	508.283313468302	1014.5520740034041	2	508.2822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTVPHVFSK_	ENSG00000095015|ENST00000399503|MAP3K1	72.87924865735499	0.12833875048249987	5				NaN	NaN	0	NaN	4795	3571	8366
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8369	26.132	NaN	14716	30	0	4258	0.106			+	29299	NYLLKPFLL	9	57	374.2297542393538	1119.6674333182614	3	374.2290954589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NYLLKPFLL_	REV__ENST00000392455.7_2_3:191112649-191112850:+|nuORF	31.954861631926434	0.5046124803899898	5				NaN	NaN	0	NaN	4796	3571	8366
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8370	26.134	NaN	6816.6	30	0	1723.4	0.106			+	-1	LAVLQQCLA	9	54	339.19121304612236	1014.551809738567	3	339.1905822753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_LAVLQQC(Carbamidomethyl (C))LA_	REV__ENSG00000177535|ENST00000641149|OR2B11;REV__OR2B11|p.P267Lfs*18|1|0.36|ENSG00000177535|chr1:247451183-247451183|G/-|frameshift_variant	29.14955571784316	0.5308295550522326	5				NaN	NaN	0	NaN	4797	3571	8366
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8371	26.136	NaN	3536.5	30	0	1695.7	0.106	+			48168	VSYVRKVLQ	9	42	364.5571856498257	NaN	0	364.5572814941406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSYVRKVLQ_	ENSG00000164961|ENST00000318410|WASHC5	40.77816245573522	0.2702456086868081	5				NaN	NaN	0	NaN	4798	3571	8366
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8372	26.138	NaN	1877.4	30	0	241.2	0.106	+			51030	YKQNSAQI	8	55	476.2474182692233	950.4802836052467	2	476.2483215332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YKQNSAQI_	ENSG00000163867|ENST00000357182|ZMYM6;ENST00000493328.5_1_1:35455862-35480681:-|nuORF;nc|ENSG00000163867|O95789-1|ZMYM6;ZMYM6|p.F804Lfs*6|1|0.38|ENSG00000163867|chr1:34988670-34988670|A/-|frameshift_variant;ZMYM6|p.I637Yfs*14|1|0.36|ENSG00000163867|chr1:35005177-35005177|T/-|frameshift_variant;ZMYM6|p.L686Ifs*41|1|0.03|ENSG00000163867|chr1:34992324-34992325|-/GAAAGGAAAAGAAAAT|frameshift_variant;ZMYM6|p.N1298Ifs*9|1|0.15|ENSG00000163867|chr1:34987189-34987189|T/-|frameshift_variant;ZMYM6|p.N724Mfs*15|1|0.42|ENSG00000163867|chr1:34988911-34988911|T/-|frameshift_variant;ZMYM6|p.T295Nfs*8|1|0.41|ENSG00000163867|chr1:35012493-35012494|-/T|frameshift_variant	60.97194046774394	0.49215940876911696	5				NaN	NaN	0	NaN	4799	3571	8366
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8373	26.139	NaN	4696.4	30	0	1355.9	0.035	+			43837	TLSTVGARFP	10	61	524.7938944280567	1047.5732359229132	2	524.7935180664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TLSTVGARFP_	ENSG00000120332|ENST00000239462|TNN	39.252832667884924	0.5560298534376815	5				NaN	NaN	0	NaN	4800	3571	8366
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8389	26.173	NaN	5562.6	30	0	604.26	0.214				-1	PVEEVMPVL	9	62	514.7685749339987	1027.5225969347973	2	514.7667236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_PVEEVM(Oxidation (M))PVL_	ENSG00000197157|ENST00000354725|SND1;GAS2L3-SND1|1|fusion	40.5726180659479	0.4135428067754104	5				NaN	NaN	0	NaN	4813	3574	8388
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8390	26.176	NaN	2797.7	30	0	360.22	0.106	+			12628	GEIGTKTTL	9	54	460.25908567020446	918.5036184072089	2	460.25775146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEIGTKTTL_	ENSG00000175792|ENST00000322623|RUVBL1	85.16082228582465	0.07850854922700509	5				NaN	NaN	0	NaN	4814	3574	8388
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8391	26.178	NaN	1194.5	30	0	418.94	0.106				-1	 	0	26	327.7386530930345	653.462753252869	2	327.7377624511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4815	3574	8388
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8392	26.18	NaN	2091.5	30	0	258.47	0.106	+			19157	IYQKTLKIN	9	63	560.8409828283795	1119.667412723559	2	560.8401489257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IYQKTLKIN_	ENST00000431391.1_1_3:196042974-196043040:-|nuORF	42.86426827375447	0.38666266728046506	5				NaN	NaN	0	NaN	4816	3574	8388
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8393	26.182	NaN	3938.2	30	0	737.02	0.106			+	9915	EQREQHEDNF	10	76	666.2851901307598	1330.5558273283195	2	666.2832641601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EQREQHEDNF_	REV__ENSG00000157741|ENST00000473989|UBN2;REV__nc|ENSG00000157741|Q6ZU65-2|UBN2;REV__UBN2|p.G1191Efs*28|1|0.17|ENSG00000157741|chr7:139284473-139284473|G/-|frameshift_variant;REV__UBN2|p.K314Rfs*11|1|0.15|ENSG00000157741|chr7:139261281-139261281|A/-|frameshift_variant;REV__UBN2|p.K315Efs*5|1|0.25|ENSG00000157741|chr7:139261280-139261281|-/A|frameshift_variant;REV__UBN2|p.K542Nfs*2|1|0.14|ENSG00000157741|chr7:139272347-139272347|A/-|frameshift_variant;REV__UBN2|p.L543Tfs*6|1|0.38|ENSG00000157741|chr7:139272346-139272347|-/A|frameshift_variant;REV__UBN2|p.S988Hfs*27|1|0.18|ENSG00000157741|chr7:139283862-139283862|C/-|frameshift_variant	46.45678178249821	0.4896490706773647	5				NaN	NaN	0	NaN	4817	3574	8388
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8394	26.184	NaN	1412.8	30	0	429.61	0.106				-1	 	0	50	434.7799648390054	NaN	0	434.7798156738281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4818	3574	8388
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8395	26.186	NaN	2900.6	30	0	794.17	0.035			+	-1	ETTNSGTNK	9	54	497.2293780708346	992.4442032084693	2	497.2275085449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))ETTNSGTNK_	REV__ENSG00000140307|ENST00000396060|GTF2A2;REV__ENST00000267869.8_1_15:59931333-59949661:-|nuORF	69.6276240434122	0.14239879520340665	5				NaN	NaN	0	NaN	4819	3574	8388
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8406	26.209	NaN	8909.2	30	0	802.84	0.214	+			14294	GSVYITLKK	9	68	504.80884358561195	1007.6031342380239	2	504.80804443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSVYITLKK_	ENSG00000140319|ENST00000267884|SRP14;ENST00000558243.1_1_15:40330963-40331317:-|nuORF;ENST00000558527.5_1_15:40329525-40331317:-|nuORF;ENST00000559475.5_1_15:40329218-40331146:-|nuORF	140.11223852658463	0.010427410095706195	5				NaN	NaN	0	NaN	4827	3577	8405
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8407	26.213	NaN	10074	30	0	3374.6	0.106				-1	 	0	57	424.24874524496795	846.4829375567359	2	424.2477111816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4828	3577	8405
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8408	26.215	NaN	2673.7	30	0	1165.3	0.106	+			9270	EHAREQEQQ	9	65	577.7638007318657	1153.5130485305313	2	577.7633056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EHAREQEQQ_	ENSG00000186815|ENST00000335509|TPCN1;ENST00000551127.5_1_12:113730719-113733878:+|nuORF;ENST00000552077.5_1_12:113726380-113733878:+|nuORF;nc|ENSG00000186815|Q9ULQ1-3|TPCN1;TPCN1|p.R792Q|1|0.16|ENSG00000186815|chr12:113296000-113296000|G/A|missense_variant	36.446750945000026	0.4619375763483977	5				NaN	NaN	0	NaN	4829	3577	8405
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8409	26.217	NaN	10013	30	0	2463.5	0.106			+	2445	APIFPFVLF	9	68	350.87258935829516	1049.5959386750856	3	350.8719482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_APIFPFVLF_	REV__ENSG00000133687|ENST00000539277|TMTC1;REV__ENST00000553189.5_1_12:29689066-29935873:-|nuORF;REV__nc|ENSG00000133687|Q8IUR5-1|TMTC1;REV__nc|ENSG00000133687|Q8IUR5-2|TMTC1;REV__nc|ENSG00000133687|Q8IUR5-3|TMTC1;REV__TMTC1|p.E735Kfs*5|1|0.3|ENSG00000133687|chr12:29516454-29516454|T/-|frameshift_variant	37.15910966729921	0.4535818937225704	5				NaN	NaN	0	NaN	4830	3577	8405
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8410	26.219	NaN	5176.4	30	0	1230.4	0.106			+	13583	GLVFIVDL	8	56	438.2646510982399	874.5147492632798	2	438.2635803222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GLVFIVDL_	REV__ENST00000469473.1_1_14:81799307-81799562:-|nuORF	37.028477286268924	0.6747514403204248	5				NaN	NaN	0	NaN	4831	3577	8405
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8411	26.22	NaN	2001	30	0	245.35	0.034				-1	MQQTLTTK	8	54	483.75196707953523	965.4893812258705	2	483.75042724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_M(Oxidation (M))QQTLTTK_	sp|P16785|LTP_HCMVALargetegumentproteindeneddylaseOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL48PE=1SV=1;sp|Q6SW84|LTP_HCMVMLargetegumentproteindeneddylaseOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL48PE=3SV=1	79.71258880314673	0.32596852995588826	5				NaN	NaN	0	NaN	4832	3577	8405
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8412	26.221	NaN	6341.4	30	0	804.26	0.142				-1	EKQETGCPPL	10	72	579.7762957062477	1157.5380384792952	2	579.7755126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_EKQETGC(Carbamidomethyl (C))PPL_	ENSG00000088882|ENST00000380605|CPXM1	51.19269402634007	0.44601001148513897	5				NaN	NaN	0	NaN	4833	3577	8405
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8426	26.252	NaN	31434	30	0	9467	0.215				-1	 	0	62	412.21985137914305	822.4251498250861	2	412.21881103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4844	3580	8425
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8427	26.256	NaN	5930.5	30	0	714.62	0.106	+			31371	QKEEPLREQ	9	72	578.8022703079791	1155.5899876827582	2	578.8018188476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QKEEPLREQ_	ENSG00000166220|ENST00000456372|TBATA;nc|ENSG00000166220|Q96M53-2|TBATA;nc|ENSG00000166220|Q96M53|TBATA	64.20726635412375	0.17854274437659667	5				NaN	NaN	0	NaN	4845	3580	8425
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8428	26.258	NaN	3786.9	30	0	1237.6	0.106	+			27366	MKALYEQNQ	9	57	562.7708576300549	NaN	0	562.7708740234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MKALYEQNQ_	ENSG00000101003|ENST00000262460|GINS1;ENST00000473460.1_1_20:25394446-25397839:+|nuORF	37.81151784470057	0.28666463014928195	5				NaN	NaN	0	NaN	4846	3580	8425
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8429	26.26	NaN	3764.7	30	0	677.26	0.106			+	1148	AEMKGSINK	9	61	497.2542995927793	992.4940462523587	2	497.2532958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_AEM(Oxidation (M))KGSINK_	REV__tr|U7SZG0|U7SZG0_FUSNUAutotransporterdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00737PE=4SV=1	56.43379154798735	0.2433427591689151	5				NaN	NaN	0	NaN	4847	3580	8425
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8430	26.262	NaN	3700.4	30	0	364.02	0.106	+			28824	NPLQKDPQY	9	73	551.7809717607746	1101.5473905883491	2	551.7800903320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NPLQKDPQY_	ENSG00000115685|ENST00000234038|PPP1R7;nc|ENSG00000115685|Q15435-2|PPP1R7;PPP1R7|p.R330W|1|0.49|ENSG00000115685|chr2:241182728-241182728|C/T|missense_variant	122.93914200107957	0.019420478173996256	5				NaN	NaN	0	NaN	4848	3580	8425
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8431	26.263	NaN	2886.7	30	0	296.41	0.034				-1	 	0	61	476.7594123749331	951.5042718166662	2	476.75830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4849	3580	8425
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8432	26.264	NaN	5930.1	30	0	794	0.142	+			33006	REFGANDNMGA	11	70	591.2548035384175	1180.495054143635	2	591.2537231445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_REFGANDNMGA_	ENSG00000162896|ENST00000356495|PIGR	53.59686742100583	0.38061189074210516	5				NaN	NaN	0	NaN	4850	3580	8425
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8446	26.295	NaN	4580.4	30	0	1088	0.214				-1	QCKLYDSL	8	59	513.7507661486408	1025.4869793640814	2	513.7501831054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_QC(Carbamidomethyl (C))KLYDSL_	ENSG00000164007|ENST00000296387|CLDN19;nc|ENSG00000164007|Q8N6F1-2|CLDN19;nc|ENSG00000164007|Q8N6F1-3|CLDN19	31.954861631926434	0.7126016770032289	5				NaN	NaN	0	NaN	4861	3583	8445
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8447	26.299	NaN	2458.1	30	0	576.69	0.106				-1	 	0	41	407.24105183944783	812.4675507456957	2	407.2400207519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4862	3583	8445
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8448	26.301	NaN	3332.2	30	0	433.49	0.106	+			14588	GTFVGVHVR	9	55	486.27535496130673	970.5361569894135	2	486.27447509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTFVGVHVR_	ENSG00000176920|ENST00000425340|FUT2	90.36981228632155	0.0638227155548745	5				NaN	NaN	0	NaN	4863	3583	8445
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8449	26.303	NaN	2994.2	30	0	418.2	0.106				-1	STLAKMVEC	9	64	519.752534551441	1037.490516169682	2	519.7518310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_STLAKMVEC(Carbamidomethyl (C))_	ENST00000564068.1_1_15:75630375-75630672:+|nuORF;ENST00000568034.1_1_15:75628478-75630672:+|nuORF	49.44154591367651	0.3095138337212152	5				NaN	NaN	0	NaN	4864	3583	8445
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8450	26.305	NaN	2171.3	30	0	182.48	0.106				-1	 	0	56	454.28527732638935	906.5560017195787	2	454.2838439941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4865	3583	8445
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8451	26.306	NaN	2146.8	30	0	222.18	0.033				-1	 	0	45	443.75401121414774	885.4934694950955	2	443.752685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4866	3583	8445
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8452	26.307	NaN	1388.7	30	0	130.22	0.14			+	46764	VGTKEDIIK	9	60	501.7953796386719	NaN	0	501.7953796386719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VGTKEDIIK_	REV__DAB2|p.F398Lfs*15|1|0.36|ENSG00000153071|chr5:39382765-39382765|A/-|frameshift_variant;REV__ENSG00000153071|ENST00000320816|DAB2;REV__nc|ENSG00000153071|P98082-2|DAB2;REV__nc|ENSG00000153071|P98082-3|DAB2	36.446750945000026	0.29355505452396785	5				NaN	NaN	0	NaN	4867	3583	8445
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8470	26.346	NaN	23007	30	0	10850	0.214	+			7451	DFKPEEYPL	9	66	379.8531909537219	1136.5377434613656	3	379.8524169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DFKPEEYPL_	ENSG00000135338|ENST00000369846|LCA5	56.72105179125745	0.24094814563026265	5				NaN	NaN	0	NaN	4882	3586	8469
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8471	26.35	NaN	7083.4	30	0	597.14	0.106	+			46061	VCIISNNMLM	10	75	569.2759588236935	1136.5373647141869	2	569.2754516601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VCIISNNMLM_	ENST00000379638.8_1_5:112213371-112213464:-|nuORF	72.87924865735499	0.25379688738724415	5				NaN	NaN	0	NaN	4883	3586	8469
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8472	26.352	NaN	3289	30	0	639.56	0.106	+			25765	LSAIAISRTP	10	46	343.542281639949	1027.6050155200471	3	343.5415344238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSAIAISRTP_	ENSG00000165678|ENST00000372134|GHITM	59.93077597824379	0.36646980200755325	5				NaN	NaN	0	NaN	4884	3586	8469
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8473	26.354	NaN	898.83	30	0	131.38	0.106	+			41426	SVNGKTVTL	9	47	459.76593017578125	NaN	0	459.76593017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVNGKTVTL_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	30.317721548370564	0.32449924987115025	5				NaN	NaN	0	NaN	4885	3586	8469
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8474	26.355	NaN	2801.7	30	0	453.77	0.106				-1	 	0	35	336.53491132318095	1006.5829045697428	3	336.53399658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4886	3586	8469
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8475	26.357	NaN	3035.9	30	0	241.2	0.035	+			11712	FSAESSRSL	9	64	492.2443732275062	982.4741935218124	2	492.24310302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FSAESSRSL_	DOCK7|p.F1836Dfs*12|1|0.05|ENSG00000116641|chr1:62477795-62477796|-/TGTC|frameshift_variant;ENSG00000116641|ENST00000635253|DOCK7;nc|ENSG00000116641|Q96N67-2|DOCK7;nc|ENSG00000116641|Q96N67-3|DOCK7;nc|ENSG00000116641|Q96N67-4|DOCK7;nc|ENSG00000116641|Q96N67-5|DOCK7;nc|ENSG00000116641|Q96N67-6|DOCK7	76.16968421966216	0.11411088698345859	5				NaN	NaN	0	NaN	4887	3586	8469
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8476	26.358	NaN	1970.4	30	0	279.3	0.138				-1	IAAICTRV	8	52	452.2568990860478	902.4992452388956	2	452.255615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_IAAIC(Carbamidomethyl (C))TRV_	ENST00000466409.1_1_9:95873162-95873573:+|nuORF	38.80614096846853	0.6637206697844082	5				NaN	NaN	0	NaN	4888	3586	8469
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8490	26.389	NaN	12509	30	0	832.88	0.214	+			24096	LEKKIEQEL	9	75	565.3272628338174	1128.6399727344347	2	565.3269653320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LEKKIEQEL_	CHMP4B|p.E41G|1|0.06|ENSG00000101421|chr20:33811590-33811590|A/G|missense_variant;ENSG00000101421|ENST00000217402|CHMP4B	160.8219353732433	0.004346709298329381	5				NaN	NaN	0	NaN	4899	3589	8489
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8491	26.393	NaN	5667.6	30	0	556.15	0.106	+			42915	TEIEGTQKL	9	65	509.7754202145178	1017.5362874958356	2	509.7744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEIEGTQKL_	ENSG00000120899|ENST00000346049|PTK2B;nc|ENSG00000120899|Q14289-2|PTK2B	158.07458414430337	0.004987072822166904	5				NaN	NaN	0	NaN	4900	3589	8489
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8492	26.395	NaN	11960	30	0	4442.6	0.106			+	9550	ELEKQEKLL	9	49	377.2202517160966	NaN	0	377.22021484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ELEKQEKLL_	REV__CCDC146|p.E671Qfs*21|1|0.06|ENSG00000135205|chr7:77282647-77282648|-/CAGAGGCAGA|frameshift_variant;REV__CCDC146|p.F933Lfs*10|1|0.43|ENSG00000135205|chr7:77294794-77294794|T/-|frameshift_variant;REV__ENSG00000135205|ENST00000285871|CCDC146;REV__ENST00000461882.1_1_7:76871694-76888407:+|nuORF	37.81151784470057	0.28666463014928195	5				NaN	NaN	0	NaN	4901	3589	8489
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8493	26.397	NaN	4381.4	30	0	420.01	0.106	+			35149	SAIASTKVM	9	59	454.24833140346254	906.4821098737251	2	454.2491149902344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SAIASTKVM_	ENSG00000104442|ENST00000276569|ARMC1;nc|ENSG00000104442|Q9NVT9-2|ARMC1	70.8162118820467	0.13725933411854815	5				NaN	NaN	0	NaN	4902	3589	8489
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8494	26.398	NaN	1488.1	30	0	206.44	0.106	+			29525	PEAQWHSSL	9	61	527.7531122677246	1053.4916716022492	2	527.7529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PEAQWHSSL_	ENSG00000169710|ENST00000306749|FASN	44.116797842482775	0.37197099687881774	5				NaN	NaN	0	NaN	4903	3589	8489
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8495	26.4	NaN	1774.2	30	0	278.11	0.036				-1	TAKDCSIMI	9	46	346.8372471268102	1037.4899119806307	3	347.1973571777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_TAKDC(Carbamidomethyl (C))SIMI_	ENSG00000127080|ENST00000287996|IPPK;ENST00000486841.1_1_9:95378116-95381853:-|nuORF	35.61828744233558	0.47037581924408073	5				NaN	NaN	0	NaN	4904	3589	8489
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8496	26.401	NaN	2095.4	30	0	241.91	0.14	+			25212	LMLSEVMKL	9	60	532.299815290126	1062.585077647052	2	532.2988891601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LMLSEVMKL_	RHPN2|p.T570M|1|0.35|ENSG00000131941|chr19:32990605-32990605|G/A|missense_variant	49.44154591367651	0.3095138337212152	5				NaN	NaN	0	NaN	4905	3589	8489
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8510	26.432	NaN	4066.7	30	0	859.11	0.214				-1	 	0	53	433.28006495822154	864.5455769832431	2	433.27874755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4916	3592	8509
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8511	26.436	NaN	3426	30	0	339.96	0.106	+			30191	PSLQGGPTIM	10	64	500.7601360695662	999.5057192059325	2	501.2665100097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PSLQGGPTIM_	SHMT2|p.H328Tfs*8|1|0.54|ENSG00000182199|chr12:57233300-57233300|C/-|frameshift_variant	47.95952297671804	0.47580206326914537	5				NaN	NaN	0	NaN	4917	3592	8509
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8512	26.438	NaN	4147.5	30	0	290.18	0.106	+			36119	SEKNMISKL	9	66	525.2879923318264	1048.5614317304528	2	525.287353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEKNMISKL_	ENSG00000036257|ENST00000264414|CUL3;nc|ENSG00000036257|Q13618-2|CUL3;nc|ENSG00000036257|Q13618-3|CUL3	93.5975768576971	0.05472259948179787	5				NaN	NaN	0	NaN	4918	3592	8509
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8513	26.44	NaN	3646.4	30	0	1008.5	0.106	+			38893	SSPCHIEM	8	56	480.70041302803406	959.3862731228681	2	480.6990661621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_SSPC(Carbamidomethyl (C))HIEM_	ENSG00000265681|ENST00000580261|RPL17;ENST00000414070.1_1_1:109535017-109535455:+|nuORF;ENST00000446498.1_1_1:26781156-26781564:-|nuORF;ENST00000452862.1_1_3:197577273-197577471:-|nuORF;ENST00000498256.1_1_8:29489773-29490157:+|nuORF;nc|ENSG00000265681|P18621-2|RPL17;nc|ENSG00000265681|P18621-3|RPL17	57.81127852772723	0.5234495074909924	5				NaN	NaN	0	NaN	4919	3592	8509
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8514	26.441	NaN	1416.9	30	0	193.17	0.106	+			2273	ALYGGSLQK	9	45	468.76080322265625	NaN	0	468.76080322265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ALYGGSLQK_	ENSG00000197121|ENST00000354764|PGAP1;nc|ENSG00000197121|Q75T13-3|PGAP1;PGAP1|p.K353Sfs*13|1|0.37|ENSG00000197121|chr2:196892376-196892377|TT/-|frameshift_variant;PGAP1|p.K723Yfs*11|1|0.11|ENSG00000197121|chr2:196846002-196846003|-/CTATGTGTTTAAGGTAT|frameshift_variant	51.33545320467046	0.19748963086191895	5				NaN	NaN	0	NaN	4920	3592	8509
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8515	26.443	NaN	1360.4	30	0	467.61	0.034			+	43768	TLGVPQLIN	9	47	477.7841674371244	NaN	0	477.7845153808594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TLGVPQLIN_	REV__ENSG00000070018|ENST00000261349|LRP6	15.641811463095205	0.38404136392510424	5				NaN	NaN	0	NaN	4921	3592	8509
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8516	26.444	NaN	1899.1	30	0	362.35	0.14	+			33455	RIPKLYEL	8	60	516.3172715188728	1030.6199901045454	2	516.3153686523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RIPKLYEL_	ENST00000506480.5_1_4:88489607-88651604:-|nuORF	38.80614096846853	0.6637206697844082	5				NaN	NaN	0	NaN	4922	3592	8509
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8528	26.472	NaN	2075.2	30	0	1195	0.214	+			27038	LYVTVVISA	9	30	322.19359386197505	NaN	0	322.1936950683594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LYVTVVISA_	ENST00000484505.1_1_6:149718837-149718933:+|nuORF	19.359975847455235	0.3714571876404798	5				NaN	NaN	0	NaN	4931	3595	8527
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8529	26.475	NaN	3132.9	30	0	549.4	0.106	+			35817	SEARIQQL	8	60	472.7630530172127	943.5115531012254	2	472.7618713378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEARIQQL_	ENSG00000100242|ENST00000689035|SUN2;ENST00000469086.5_1_22:39136824-39138467:-|nuORF;ENST00000477262.5_1_22:39135390-39138407:-|nuORF;nc|ENSG00000100242|Q9UH99-2|SUN2;nc|ENSG00000100242|Q9UH99-3|SUN2	58.78195531508484	0.5138399468736706	5				NaN	NaN	0	NaN	4932	3595	8527
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8530	26.477	NaN	1799.1	30	0	963.25	0.106				-1	RVVGTELVIPC	11	49	621.8453919051404	1241.6762308770808	2	621.8448486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_RVVGTELVIPC(Carbamidomethyl (C))_	ENSG00000134247|ENST00000393203|PTGFRN;PTGFRN|p.S123Afs*35|1|0.15|ENSG00000134247|chr1:116942027-116942027|C/-|frameshift_variant	28.081489160057373	0.6952392775027776	5				NaN	NaN	0	NaN	4933	3595	8527
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8531	26.479	NaN	1517	30	0	88.907	0.106			+	24943	LKWTVFAKN	9	59	553.8207947662369	1105.6270365992737	2	553.8206787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LKWTVFAKN_	REV__DNAH14|p.I2559Nfs*2|1|0.39|ENSG00000185842|chr1:225337448-225337449|-/A|frameshift_variant;REV__DNAH14|p.K396Rfs*4|1|0.25|ENSG00000185842|chr1:225023636-225023637|AA/-|frameshift_variant;REV__DNAH14|p.K466Rfs*42|2|0.29|ENSG00000185842|chr1:225023841-225023841|A/-|frameshift_variant;REV__DNAH14|p.T2021Hfs*9|1|0.38|ENSG00000185842|chr1:225289906-225289906|A/-|frameshift_variant;REV__DNAH14|p.V536Yfs*11|1|0.03|ENSG00000185842|chr1:225042893-225042894|-/ATAC|frameshift_variant;REV__ENSG00000185842|ENST00000682510|DNAH14;REV__nc|ENSG00000185842|Q0VDD8-2|DNAH14;REV__nc|ENSG00000185842|Q0VDD8-4|DNAH14	30.317721548370564	0.5199124245378496	5				NaN	NaN	0	NaN	4934	3595	8527
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8532	26.481	NaN	2081.7	30	0	173.21	0.106			+	8203	EADHVFFALP	10	69	573.2856668420255	1144.556780750851	2	573.786865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EADHVFFALP_	REV__ENSG00000073536|ENST00000442241|NLE1;REV__ENST00000593176.1_1_17:33464206-33469153:-|nuORF	35.61828744233558	0.588957954432594	5				NaN	NaN	0	NaN	4935	3595	8527
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8533	26.483	NaN	961.63	30	0	108.65	0.106	+			20604	KGASFNDNII	10	40	539.781016506403	NaN	0	539.7811889648438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KGASFNDNII_	ENSG00000154864|ENST00000674853|PIEZO2;nc|ENSG00000154864|Q9H5I5-2|PIEZO2;nc|ENSG00000154864|Q9H5I5-4|PIEZO2;nc|ENSG00000154864|Q9H5I5|PIEZO2;PIEZO2|p.E2492Kfs*3|1|0.27|ENSG00000154864|chr18:10680339-10680339|T/-|frameshift_variant;PIEZO2|p.L2716Ffs*33|1|0.12|ENSG00000154864|chr18:10671638-10671639|-/A|frameshift_variant;PIEZO2|p.Y2489Sfs*7|1|0.06|ENSG00000154864|chr18:10680346-10680347|-/GG|frameshift_variant	20.83715455343099	0.4201028297492154	5				NaN	NaN	0	NaN	4936	3595	8527
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8534	26.485	NaN	1314.5	30	0	114.91	0.037	+			11123	FFVNYVIMAA	10	46	587.802978515625	NaN	0	587.802978515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FFVNYVIMAA_	TMEM63C|p.T551M|1|0.23|ENSG00000165548|chr14:77248397-77248397|C/T|missense_variant	22.579656572578934	0.4201028297492154	5				NaN	NaN	0	NaN	4937	3595	8527
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8549	26.516	NaN	7212.5	30	0	1085.1	0.214	+			993	AEKKIEVVM	9	72	523.800502230256	1045.586451527312	2	523.7996826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEKKIEVVM_	ENSG00000075539|ENST00000358350|FRYL;ENST00000302806.5_1_4:48621203-48655803:-|nuORF;FRYL|p.K2264Qfs*11|1|0.13|ENSG00000075539|chr4:48531269-48531270|-/G|frameshift_variant;FRYL|p.L330*|1|0.33|ENSG00000075539|chr4:48602066-48602066|A/-|frameshift_variant;FRYL|p.L330Ffs*3|1|0.35|ENSG00000075539|chr4:48602065-48602066|-/A|frameshift_variant;FRYL|p.P2464Efs*13|1|0.04|ENSG00000075539|chr4:48523032-48523033|-/TATACAATTC|frameshift_variant	72.87924865735499	0.12833875048249987	5				NaN	NaN	0	NaN	4949	3598	8548
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8550	26.52	NaN	3597.2	30	0	487.77	0.106	+			37388	SLGAAVVPAL	10	66	449.27481798929585	896.5350830453917	2	449.27362060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLGAAVVPAL_	LCE2B|p.P13Lfs*61|1|0.24|ENSG00000159455|chr1:152686877-152686877|C/-|frameshift_variant;LCE2B|p.Q35Sfs*39|1|0.2|ENSG00000159455|chr1:152686943-152686943|C/-|frameshift_variant	38.80614096846853	0.5601458937078225	5				NaN	NaN	0	NaN	4950	3598	8548
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8551	26.522	NaN	1192.4	30	0	120.04	0.106				-1	 	0	54	485.8377399160479	969.6609268988958	2	485.8365173339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4951	3598	8548
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8552	26.524	NaN	2091.5	30	0	157.21	0.106	+			51575	YYKSTSSAF	9	57	527.2488176841974	NaN	0	527.2478637695312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YYKSTSSAF_	ENSG00000197093|ENST00000360039|GAL3ST4;ENST00000423751.2_1_7:99757553-99764836:-|nuORF;GAL3ST4|p.F427Sfs*17|1|0.32|ENSG00000197093|chr7:100160111-100160111|G/-|frameshift_variant;nc|ENSG00000197093|Q96RP7-2|GAL3ST4	60.11826168202944	0.14881452885248947	5				NaN	NaN	0	NaN	4952	3598	8548
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8553	26.525	NaN	2213.4	30	0	689.08	0.106	+			47666	VSDMVRGI	8	50	438.73343731891293	875.4523217046259	2	438.73223876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSDMVRGI_	ENSG00000221866|ENST00000321063|PLXNA4;nc|ENSG00000221866|Q9HCM2-2|PLXNA4;nc|ENSG00000221866|Q9HCM2-3|PLXNA4;PLXNA4|p.D428Efs*5|1|0.11|ENSG00000221866|chr7:132489379-132489379|G/-|frameshift_variant;PLXNA4|p.G1175Afs*3|1|0.21|ENSG00000221866|chr7:132180701-132180701|C/-|frameshift_variant;PLXNA4|p.M966Cfs*7|1|0.29|ENSG00000221866|chr7:132187572-132187572|C/-|frameshift_variant;PLXNA4|p.T1063Pfs*27|1|0.32|ENSG00000221866|chr7:132182163-132182163|C/-|frameshift_variant	45.9519527083369	0.6193794311207887	5				NaN	NaN	0	NaN	4953	3598	8548
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8554	26.527	NaN	1810.4	30	0	210.72	0.034			+	24818	LIRDGEQL	8	56	472.2647399902344	NaN	0	472.2647399902344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LIRDGEQL_	REV__ENSG00000172367|ENST00000355547|NHERF4;REV__nc|ENSG00000172367|Q86UT5-3|NHERF4;REV__nc|ENSG00000172367|Q86UT5-4|NHERF4;REV__nc|ENSG00000172367|Q86UT5-5|NHERF4;REV__nc|ENSG00000172367|Q86UT5|NHERF4;REV__PDZD3|p.A264Pfs*6|2|0.31|ENSG00000172367|chr11:119187626-119187626|C/-|frameshift_variant	28.2542754592877	1.7418937515398478	5				NaN	NaN	0	NaN	4954	3598	8548
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8555	26.528	NaN	1944.6	30	0	162.69	0.137	+			31357	QKAPAVPA	8	51	391.23205067808163	780.4495484229633	2	391.23211669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QKAPAVPA_	ENSG00000180043|ENST00000424985|GARIN5B	44.53106598305862	0.628196326904373	5				NaN	NaN	0	NaN	4955	3598	8548
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8569	26.559	NaN	13948	30	0	3978.2	0.214	+			41994	SVYGYGVQK	9	66	500.7601360695662	999.5057192059325	2	500.7583923339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVYGYGVQK_	ENSG00000107164|ENST00000319725|FUBP3;FUBP3|p.P395Lfs*27|2|0.27|ENSG00000107164|chr9:130630689-130630689|C/-|frameshift_variant	131.03138772384656	0.014687601201650916	5				NaN	NaN	0	NaN	4966	3601	8568
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8570	26.562	NaN	6048	30	0	888.77	0.106	+			24066	LEKAENQVL	9	61	522.291022834081	1042.567492734962	2	522.2908325195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LEKAENQVL_	ENSG00000185825|ENST00000345046|BCAP31;ENST00000563143.2_1_16:32882346-32883351:+|nuORF;nc|ENSG00000185825|P51572-2|BCAP31	83.6470233535746	0.08277643980271215	5				NaN	NaN	0	NaN	4967	3601	8568
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8571	26.564	NaN	2624.7	30	0	488.21	0.106				-1	 	0	53	434.78008652779005	NaN	0	434.7798156738281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4968	3601	8568
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8572	26.566	NaN	1868.7	30	0	272.97	0.106	+			6439	AVYADSGNFK	10	58	536.2602199186477	1070.5058869040954	2	536.25927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVYADSGNFK_	ENSG00000145780|ENST00000274457|FEM1C	33.921630207806714	0.6028135429846169	5				NaN	NaN	0	NaN	4969	3601	8568
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8573	26.568	NaN	1542.1	30	0	215.56	0.106				-1	AMQLCHFI	8	54	518.2423706054688	NaN	0	518.2423706054688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C),Oxidation (M)	_AM(Oxidation (M))QLC(Carbamidomethyl (C))HFI_	RYR3|p.E2211Qfs*84|1|0.14|ENSG00000198838|chr15:33722725-33722726|-/CA|frameshift_variant;RYR3|p.G2237Efs*57|1|0.42|ENSG00000198838|chr15:33722800-33722800|G/-|frameshift_variant	35.200714571348534	1.7418937515398478	5				NaN	NaN	0	NaN	4970	3601	8568
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8574	26.57	NaN	1427.8	30	0	192.38	0.034			+	17513	IDKNTAAKL	9	52	487.28713733242085	NaN	0	487.2698059082031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IDKNTAAKL_	REV__ENSG00000131018|ENST00000367255|SYNE1;REV__ENST00000367256.9_1_6:152443573-152639413:-|nuORF;REV__nc|ENSG00000131018|Q8NF91-2|SYNE1;REV__nc|ENSG00000131018|Q8NF91-4|SYNE1;REV__nc|ENSG00000131018|Q8NF91-8|SYNE1;REV__SYNE1|p.L8283Pfs*8|1|0.19|ENSG00000131018|chr6:152148173-152148174|-/G|frameshift_variant;REV__SYNE1|p.V8635Sfs*12|1|0.15|ENSG00000131018|chr6:152133375-152133375|T/-|frameshift_variant	49.44154591367651	0.21054156626303966	5				NaN	NaN	0	NaN	4971	3601	8568
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8575	26.57	NaN	1901.1	30	0	332.47	0.139	+			13953	GSAFSTSISK	10	55	492.7542277437792	983.4939025543584	2	492.75311279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GSAFSTSISK_	ENSG00000179115|ENST00000314606|FARSA;ENST00000592662.5_1_19:13039347-13044510:-|nuORF	56.632244143249146	0.3964695498866976	5				NaN	NaN	0	NaN	4972	3601	8568
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8589	26.601	NaN	3541.5	30	0	508.6	0.214	+			35951	SEGPKVVSV	9	71	451.25425961002	900.49396628684	2	451.2529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEGPKVVSV_	ENSG00000143373|ENST00000336715|ZNF687;nc|ENSG00000143373|Q8N1G0-2|ZNF687;ZNF687|p.A639Pfs*74|1|0.27|ENSG00000143373|chr1:151288202-151288202|G/-|frameshift_variant;ZNF687|p.H733Mfs*30|1|0.58|ENSG00000143373|chr1:151288603-151288603|C/-|frameshift_variant;ZNF687|p.P960Lfs*23|1|0.3|ENSG00000143373|chr1:151289915-151289915|G/-|frameshift_variant;ZNF687|p.R871Gfs*29|1|0.1|ENSG00000143373|chr1:151289512-151289512|A/-|frameshift_variant;ZNF687|p.R939Vfs*10|1|0.08|ENSG00000143373|chr1:151289852-151289852|C/-|frameshift_variant	60.11826168202944	0.21262886028301267	5				NaN	NaN	0	NaN	4983	3604	8588
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8590	26.605	NaN	3769.2	30	0	560.54	0.106				-1	LEEKKHAMQ	9	73	565.2871103487363	1128.5596677642725	2	565.2859497070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LEEKKHAM(Oxidation (M))Q_	CALD1|p.E461Rfs*6|1|0.18|ENSG00000122786|chr7:134935753-134935754|-/A|frameshift_variant;CALD1|p.S660Afs*12|1|0.15|ENSG00000122786|chr7:134958108-134958108|A/-|frameshift_variant;ENSG00000122786|ENST00000361675|CALD1	64.20726635412375	0.17854274437659667	5				NaN	NaN	0	NaN	4984	3604	8588
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8591	26.607	NaN	1674.6	30	0	224.13	0.106			+	29467	PCPVGHLPW	9	63	503.2533264160156	NaN	0	503.2533264160156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PCPVGHLPW_	REV__ENST00000334370.8_1_19:42840378-42840982:+|nuORF	39.021493756699265	0.2805557132942146	5				NaN	NaN	0	NaN	4985	3604	8588
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8592	26.609	NaN	2026.4	30	0	235.09	0.106				-1	FICPCNKL	8	66	526.2579548725496	1050.501356811899	2	526.2578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_FIC(Carbamidomethyl (C))PC(Carbamidomethyl (C))NKL_	nc|ENSG00000132639|P60880-2|SNAP25	46.76643321282427	0.6143254112625767	5				NaN	NaN	0	NaN	4986	3604	8588
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8593	26.61	NaN	1016.2	30	0	329.53	0.106				-1	 	0	42	412.21985137914305	822.4251498250861	2	412.2187805175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	4987	3604	8588
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8594	26.612	NaN	1245.8	30	0	175.21	0.034	+			3812	ATAGNVLMH	9	47	457.2311867849419	NaN	0	457.2309875488281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATAGNVLMH_	ENSG00000157637|ENST00000374759|SLC38A10;ENST00000546352.1_1_17:79244758-79256003:-|nuORF;nc|ENSG00000157637|Q9HBR0-2|SLC38A10;nc|ENSG00000157637|Q9HBR0-3|SLC38A10	40.77816245573522	0.2702456086868081	5				NaN	NaN	0	NaN	4988	3604	8588
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8595	26.613	NaN	3656.1	30	0	555.78	0.139	+			50512	YANSKAVTL	9	67	483.767619989933	965.520687046666	2	483.7658996582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YANSKAVTL_	ENSG00000164091|ENST00000296490|WDR82;ENST00000487402.1_1_3:52291508-52301068:-|nuORF	85.16082228582465	0.07850854922700509	5				NaN	NaN	0	NaN	4989	3604	8588
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8610	26.646	NaN	7705.1	30	0	4333.7	0.214	+			30847	QEGAKMAVRL	10	68	551.8069620633753	1101.5993711935505	2	551.8062744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QEGAKMAVRL_	CTNNB1|p.L301Hfs*16|1|0.05|ENSG00000168036|chr3:41225827-41225831|TTCAA/-|frameshift_variant;ENSG00000168036|ENST00000349496|CTNNB1;ENSG00000173801|ENST00000393931|JUP	74.1650062923329	0.2432923583094885	5				NaN	NaN	0	NaN	5001	3607	8609
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8611	26.65	NaN	3844.3	30	0	1234	0.106	+			5746	AVGDTPIMK	9	48	466.25083163295255	930.4871103327051	2	466.2495422363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVGDTPIMK_	ENSG00000145782|ENST00000509910|ATG12;ENST00000508464.5_1_5:115169283-115173453:-|nuORF;ENST00000578331.1_1_17:71064194-71064335:-|nuORF	64.20726635412375	0.17854274437659667	5				NaN	NaN	0	NaN	5002	3607	8609
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8612	26.652	NaN	3138.6	30	0	612.86	0.106	+			27821	MSPSCSSFLE	10	67	573.2272114957364	1144.4398700582726	2	573.22802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))M(Oxidation (M))SPSCSSFLE_	ENST00000324771.12_1_6:30867268-30867352:+|nuORF	49.44154591367651	0.46214596422418036	5				NaN	NaN	0	NaN	5003	3607	8609
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8613	26.653	NaN	2798.1	30	0	204.32	0.106	+			36738	SGVSLAALKK	10	67	487.3069604820524	972.5993680309048	2	487.3057556152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SGVSLAALKK_	ENSG00000124575|ENST00000244534|H1-3;ENSG00000168298|ENST00000304218|H1-4;ENSG00000187837|ENST00000343677|H1-2	47.95952297671804	0.47580206326914537	5				NaN	NaN	0	NaN	5004	3607	8609
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8614	26.655	NaN	2598.8	30	0	276.78	0.106			+	28262	NDNIDQVKVI	10	69	579.3139805028687	1156.6134080725374	2	579.3134155273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NDNIDQVKVI_	REV__CDH11|p.R526Nfs*48|1|0.07|ENSG00000140937|chr16:64971644-64971645|-/GT|frameshift_variant;REV__CDH11|p.R526Sfs*48|1|0.09|ENSG00000140937|chr16:64971643-64971644|-/GG|frameshift_variant;REV__ENSG00000140937|ENST00000268603|CDH11;REV__nc|ENSG00000140937|P55287-2|CDH11	54.722347961057174	0.4138398245444204	5				NaN	NaN	0	NaN	5005	3607	8609
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8615	26.657	NaN	2716.1	30	0	894.15	0.034				-1	 	0	50	455.1949854277577	908.3754179223154	2	455.19403076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5006	3607	8609
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8616	26.658	NaN	4552.5	30	0	1709.5	0.143	+			35275	SALSQTLLCH	10	58	377.19338096862884	1128.5583135060865	3	377.1925354003906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_SALSQTLLC(Carbamidomethyl (C))H_	nc|ENSG00000156500|Q6P4D5|PABIR3	45.02220120713402	0.5028680121232791	5				NaN	NaN	0	NaN	5007	3607	8609
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8634	26.697	NaN	10809	30	0	5208.8	0.214			+	29391	PAPRHVGK	8	56	431.25670380208595	860.4988546709719	2	431.2554626464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PAPRHVGK_	REV__ENSG00000127586|ENST00000262315|CHTF18;REV__ENST00000498439.1_1_16:846687-847972:+|nuORF;REV__nc|ENSG00000127586|Q8WVB6-2|CHTF18;REV__nc|ENSG00000127586|Q8WVB6-3|CHTF18	47.91560031466742	0.6071945918984287	5				NaN	NaN	0	NaN	5022	3610	8633
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8635	26.7	NaN	24680	30	0	3683.2	0.106			+	36548	SFKTADHSID	10	85	560.7666692323969	1119.5187855315937	2	560.7664794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SFKTADHSID_	REV__APAF1|p.E1208Gfs*14|1|0.23|ENSG00000120868|chr12:98732437-98732438|-/G|frameshift_variant;REV__ENSG00000120868|ENST00000551964|APAF1;REV__nc|ENSG00000120868|O14727-2|APAF1;REV__nc|ENSG00000120868|O14727-3|APAF1;REV__nc|ENSG00000120868|O14727-4|APAF1;REV__nc|ENSG00000120868|O14727-5|APAF1	49.536043120802724	0.461275219792494	5				NaN	NaN	0	NaN	5023	3610	8633
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8636	26.702	NaN	2715.9	30	0	387.49	0.106			+	17411	IASDTRITA	9	58	474.2613251816304	946.5080974300608	2	474.260498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IASDTRITA_	REV__ENSG00000047056|ENST00000263150|WDR37;REV__nc|ENSG00000047056|Q9Y2I8-2|WDR37	68.78682469695295	0.14603441672067394	5				NaN	NaN	0	NaN	5024	3610	8633
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8637	26.704	NaN	2564	30	0	453.84	0.106				-1	 	0	53	434.7491515766914	867.4837502201829	2	434.7478332519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5025	3610	8633
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8638	26.706	NaN	9090.3	30	0	1969.2	0.106	+			12474	GEDPDKRISI	10	78	565.2959623946472	1128.5773718560943	2	565.2938232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GEDPDKRISI_	ENSG00000196591|ENST00000519065|HDAC2;nc|ENSG00000196591|Q92769-3|HDAC2	66.9202029811203	0.3029018092171124	5				NaN	NaN	0	NaN	5026	3610	8633
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8639	26.708	NaN	1697	30	0	200.04	0.039	+			36034	SEIQEEKPEPV	11	59	642.8208240110233	1283.6270950888465	2	642.8197021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SEIQEEKPEPV_	ENSG00000145907|ENST00000356245|G3BP1	72.09557110113691	0.21826960075221502	5				NaN	NaN	0	NaN	5027	3610	8633
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8640	26.709	NaN	13706	30	0	4277.4	0.145			+	-1	FSCHALIVAC	10	54	374.1804270697428	1119.5194518094283	3	374.1797180175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_FSC(Carbamidomethyl (C))HALIVAC_	REV__ENST00000425156.5_1_3:40433060-40433240:-|nuORF	22.579656572578934	0.6954366826851017	5				NaN	NaN	0	NaN	5028	3610	8633
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8654	26.74	NaN	2168.7	30	0	223.76	0.214	+			49715	VYMNRVKEI	9	69	576.3167745684366	1150.618996203673	2	576.3158569335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYMNRVKEI_	ENSG00000197223|ENST00000410067|C1D;ENST00000455013.2_1_10:81784495-81784867:-|nuORF	64.20726635412375	0.17854274437659667	5				NaN	NaN	0	NaN	5039	3613	8653
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8655	26.744	NaN	2944.9	30	0	316.9	0.106	+			22408	KTIVFVETK	9	60	532.8224965022614	1063.6304400713227	2	532.822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTIVFVETK_	DDX5|p.D424Ifs*31|1|0.03|ENSG00000108654|chr17:64500720-64500721|-/AAGCAATTAAT|frameshift_variant;DDX5|p.D572Nfs*6|1|0.04|ENSG00000108654|chr17:64500054-64500055|-/TGACAAGATAGTT|frameshift_variant;DDX5|p.R502Gfs*87|1|0.21|ENSG00000108654|chr17:64500264-64500264|T/-|frameshift_variant;ENSG00000108654|ENST00000225792|DDX5;ENST00000581230.5_1_17:62498125-62502378:-|nuORF;nc|ENSG00000108654|P17844-2|DDX5	75.65223720490533	0.11634833104049533	5				NaN	NaN	0	NaN	5040	3613	8653
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8656	26.746	NaN	2728.7	30	0	554.35	0.106				-1	 	0	45	336.53491132318095	1006.5829045697428	3	336.5342712402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5041	3613	8653
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8657	26.747	NaN	5387.9	30	0	1568.9	0.106	+			29092	NTMNQFVNK	9	72	548.267235566216	1094.5199181992318	2	548.2664794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NTMNQFVNK_	ENSG00000168090|ENST00000303904|COPS6	120.8684288430529	0.02067403653475984	5				NaN	NaN	0	NaN	5042	3613	8653
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8658	26.749	NaN	2806.3	30	0	177.19	0.106			+	21787	KQVAKRLID	9	66	535.8382683982097	NaN	0	535.8388061523438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KQVAKRLID_	REV__ENSG00000070047|ENST00000264555|PHRF1;REV__nc|ENSG00000070047|Q9P1Y6-3|PHRF1	54.776311868738084	0.17377682019723872	5				NaN	NaN	0	NaN	5043	3613	8653
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8659	26.751	NaN	2139	30	0	379.76	0.038				-1	RYLEKPMEI	9	60	597.8145050050734	1193.6144570769468	2	597.8131713867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_RYLEKPM(Oxidation (M))EI_	ENSG00000168610|ENST00000264657|STAT3;nc|ENSG00000168610|P40763-2|STAT3;nc|ENSG00000168610|P40763-3|STAT3;STAT3|p.R729Afs*3|2|0.33|ENSG00000168610|chr17:42316861-42316861|G/-|frameshift_variant	37.81151784470057	0.4459294069877048	5				NaN	NaN	0	NaN	5044	3613	8653
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8660	26.752	NaN	1931.4	30	0	337.66	0.142			+	44302	TSCRGRAW	8	60	497.2365537426462	992.4585545520924	2	497.2358093261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_TSC(Carbamidomethyl (C))RGRAW_	REV__GPRIN1|p.K629Efs*117|1|0.67|ENSG00000169258|chr5:176597950-176597951|-/C|frameshift_variant	45.9519527083369	0.6193794311207887	5				NaN	NaN	0	NaN	5045	3613	8653
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8673	26.781	NaN	2873.6	30	0	193.34	0.214	+			673	AEAITSQKL	9	63	480.7712707519531	NaN	0	480.7712707519531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEAITSQKL_	ENSG00000203697|ENST00000366872|CAPN8	104.0567914643314	0.015064339666778382	5				NaN	NaN	0	NaN	5055	3616	8672
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8674	26.785	NaN	1654.2	30	0	277.63	0.106			+	26400	LTEGERGIE	9	54	502.2575082578535	1002.500463582507	2	502.25628662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LTEGERGIE_	REV__tr|U7SLY5|U7SLY5_FUSNUCitratelyasesubunitbetaOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01987PE=3SV=1	66.42927471994793	0.16001998865088202	5				NaN	NaN	0	NaN	5056	3616	8672
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8675	26.787	NaN	2068.7	30	0	854.98	0.106	+			32241	QTGVYTEHVFT	11	36	641.3076967586913	1280.6008405841826	2	641.3068237304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QTGVYTEHVFT_	ENSG00000008294|ENST00000262013|SPAG9;ENST00000514613.5_1_17:49067015-49156972:-|nuORF;nc|ENSG00000008294|O60271-2|SPAG9;nc|ENSG00000008294|O60271-3|SPAG9;nc|ENSG00000008294|O60271-4|SPAG9;nc|ENSG00000008294|O60271-5|SPAG9;nc|ENSG00000008294|O60271-9|SPAG9	16.71738777980365	0.7922119881075679	5				NaN	NaN	0	NaN	5057	3616	8672
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8676	26.789	NaN	2656.1	30	0	196.62	0.106	+			47498	VQHIQLLQK	9	57	369.5610046386719	NaN	0	369.5610046386719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VQHIQLLQK_	ENSG00000171560|ENST00000403106|FGA;nc|ENSG00000171560|P02671|FGA	51.19269402634007	0.19847346126499396	5				NaN	NaN	0	NaN	5058	3616	8672
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8677	26.791	NaN	2751.4	30	0	174.84	0.106	+			46988	VKQERLSPE	9	63	543.3022522896819	1084.5899516461636	2	543.302978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VKQERLSPE_	ENSG00000163877|ENST00000296215|SNIP1;ENST00000493916.1_1_1:38018188-38019866:-|nuORF	74.25504064058377	0.12238981753128622	5				NaN	NaN	0	NaN	5059	3616	8672
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8678	26.792	NaN	2236.7	30	0	243.9	0.106			+	28070	NADLAAVQLN	10	57	514.7730931037535	1027.5316332743068	2	515.2744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NADLAAVQLN_	REV__CDH17|p.S645Lfs*3|1|0.55|ENSG00000079112|chr8:94146163-94146163|C/-|frameshift_variant;REV__ENSG00000079112|ENST00000027335|CDH17	26.69291269510374	0.6618461711292317	5				NaN	NaN	0	NaN	5060	3616	8672
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8679	26.794	NaN	2694.9	30	0	312.1	0.035	+			49075	VVKNYYLN	8	59	506.7756029020994	1011.5366528709989	2	507.27685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VVKNYYLN_	ENSG00000183833|ENST00000273390|CFAP91;ENST00000482927.5_1_3:119422024-119469941:+|nuORF;nc|ENSG00000183833|Q7Z4T9-3|CFAP91;nc|ENSG00000183833|Q7Z4T9-6|CFAP91;nc|ENSG00000183833|Q7Z4T9-8|CFAP91	40.5726180659479	0.6527593143185008	5				NaN	NaN	0	NaN	5061	3616	8672
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8696	26.829	NaN	57116	30	0	12166	0.206				-1	 	0	63	322.19421647546835	642.3738800177367	2	322.1934509277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5075	3619	8695
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8697	26.833	NaN	18401	30	0	7533.2	0.106	+			14981	GTMTGMLYK	9	69	509.24149301670144	1016.4684331002029	2	509.2406921386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_GTMTGM(Oxidation (M))LYK_	ENSG00000178440|ENST00000651763|TIMM23B-AGAP6;ENSG00000204152|ENST00000651259|TIMM23B;ENSG00000265354|ENST00000580018|TIMM23;nc|ENSG00000204152|Q5SRD1-2|TIMM23B	107.00750918261382	0.032051501805654005	5				NaN	NaN	0	NaN	5076	3619	8695
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8698	26.835	NaN	1735.2	30	0	156.77	0.106	+			42712	TDEHLQAL	8	53	463.7322082519531	NaN	0	463.7322082519531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TDEHLQAL_	ENSG00000178567|ENST00000322716|EPM2AIP1	79.9392285194092	1.7418937515398478	5				NaN	NaN	0	NaN	5077	3619	8695
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8699	26.837	NaN	4004.6	30	0	966.63	0.106	+			11617	FPVGNAFSY	9	65	501.23826768809886	1000.4619824429977	2	501.2373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FPVGNAFSY_	ENSG00000105726|ENST00000357324|ATP13A1;ENST00000474955.5_1_19:19767512-19770537:-|nuORF;nc|ENSG00000105726|Q9HD20-2|ATP13A1	42.396135135203025	0.392153681582562	5				NaN	NaN	0	NaN	5078	3619	8695
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8700	26.838	NaN	1806.3	30	0	179.1	0.106	+			28801	NPHQQYSVY	9	55	568.262965640747	1134.5113783482939	2	568.2620849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NPHQQYSVY_	ENSG00000161813|ENST00000398473|LARP4;ENST00000521120.1_1_12:50835423-50848201:+|nuORF;LARP4|p.N373Ifs*3|1|0.26|ENSG00000161813|chr12:50454408-50454408|A/-|frameshift_variant;nc|ENSG00000161813|Q71RC2-2|LARP4;nc|ENSG00000161813|Q71RC2-3|LARP4;nc|ENSG00000161813|Q71RC2-4|LARP4;nc|ENSG00000161813|Q71RC2-6|LARP4;nc|ENSG00000161813|Q71RC2-7|LARP4	66.42927471994793	0.16001998865088202	5				NaN	NaN	0	NaN	5079	3619	8695
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8701	26.84	NaN	1356.9	30	0	164.63	0.106	+			11240	FIIPQLLL	8	51	478.80996131659856	NaN	0	478.8098449707031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FIIPQLLL_	ENST00000282561.3_1_6:121769761-121769857:+|nuORF	35.200714571348534	1.7418937515398478	5				NaN	NaN	0	NaN	5080	3619	8695
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8702	26.842	NaN	2670.2	30	0	290.24	0.036	+			10965	FEAPNQEKV	9	69	531.2688877426656	1060.523222552131	2	531.267822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FEAPNQEKV_	ENSG00000132646|ENST00000379143|PCNA	47.95952297671804	0.32689736945648856	5				NaN	NaN	0	NaN	5081	3619	8695
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8717	26.873	NaN	2213.9	30	0	349.87	0.214	+			23099	KVVEGSFVYK	10	68	578.3255427212417	1154.6365325092834	2	578.32421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVVEGSFVYK_	ENSG00000203879|ENST00000447750|GDI1;ENST00000491154.1_1_X:153666748-153668487:+|nuORF	70.41160668669231	0.27395730963879994	5				NaN	NaN	0	NaN	5093	3622	8716
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8718	26.877	NaN	4429	30	0	993.31	0.106			+	45693	VAAGRRWL	8	55	464.77754054399304	927.5405281547861	2	464.7762451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VAAGRRWL_	REV__nc|ENSG00000293555|Q8N8A8|FAM169BP	39.021493756699265	0.6623843612266921	5				NaN	NaN	0	NaN	5094	3622	8716
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8719	26.879	NaN	3633.7	30	0	353.5	0.106	+			4975	ATQVAVSVPK	10	68	500.2964673297422	998.5783817262844	2	500.2955627441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATQVAVSVPK_	EIF4G1|p.P1229Qfs*2|1|0.18|ENSG00000114867|chr3:184327606-184327606|C/-|frameshift_variant;ENSG00000114867|ENST00000346169|EIF4G1;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1	102.95473732560676	0.06892206462712186	5				NaN	NaN	0	NaN	5095	3622	8716
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8720	26.881	NaN	2422.9	30	0	399.6	0.106			+	21216	KLFTLHRGS	9	65	529.8093640964149	1057.6041752596298	2	530.27490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KLFTLHRGS_	REV__ENST00000357043.6_1_3:50369488-50378094:-|nuORF;REV__ENST00000359365.8_1_3:50369488-50378094:-|nuORF	47.95952297671804	0.32689736945648856	5				NaN	NaN	0	NaN	5096	3622	8716
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8721	26.882	NaN	1171.7	30	0	101.7	0.033	+			46180	VDVSGPKM	8	58	416.71586160230976	NaN	0	416.7156677246094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VDVSGPKM_	AHNAK|p.K2311Rfs*11|1|0.33|ENSG00000124942|chr11:62527487-62527487|G/-|frameshift_variant;AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;AHNAK|p.L2124Ifs*37|1|0.04|ENSG00000124942|chr11:62528048-62528049|-/ATGCCTGATA|frameshift_variant;AHNAK|p.S1888Qfs*8|1|0.11|ENSG00000124942|chr11:62528755-62528756|-/G|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK	56.72105179125745	1.7418937515398478	5				NaN	NaN	0	NaN	5097	3622	8716
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8733	26.908	NaN	7347	30	0	3186	0.214				-1	 	0	65	529.8093640964149	1057.6041752596298	2	529.808349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5106	3625	8732
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8734	26.911	NaN	5000.4	30	0	702.42	0.106			+	9205	EGRPHFKH	8	69	504.26211265416407	1006.5096723751282	2	504.260986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EGRPHFKH_	REV__ENST00000397821.7_1_X:19554297-19554396:-|nuORF	52.936696900407355	0.5717071646657654	5				NaN	NaN	0	NaN	5107	3625	8732
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8735	26.913	NaN	5975.7	30	0	502.47	0.106	+			36578	SFSTVHEKF	9	74	541.2705479365271	1080.5265429398542	2	541.26953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SFSTVHEKF_	ENSG00000134987|ENST00000513710|WDR36;ENST00000505303.5_1_5:110428043-110447004:+|nuORF;nc|ENSG00000134987|Q8NI36|WDR36	125.71293069911285	0.017741295328254008	5				NaN	NaN	0	NaN	5108	3625	8732
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8736	26.915	NaN	3557.6	30	0	282.35	0.106	+			51224	YPVEHPDKF	9	71	566.2793769592002	1130.5442009852004	2	566.27978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YPVEHPDKF_	ENSG00000165280|ENST00000358901|VCP;ENST00000493886.5_1_9:35057116-35062147:-|nuORF	112.41091882917199	0.026537921851008135	5				NaN	NaN	0	NaN	5109	3625	8732
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8737	26.917	NaN	13827	30	0	6167.1	0.106			+	-1	SMSTVANRSI	10	51	361.1824825827219	1080.5256183483657	3	361.1819152832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_SM(Oxidation (M))STVANRSI_	REV__ENSG00000122591|ENST00000432176|HYCC1;REV__ENST00000498833.1_1_7:22985770-23000907:-|nuORF;REV__nc|ENSG00000122591|Q9BYI3-3|HYCC1	43.650786325866115	0.5155049133366767	5				NaN	NaN	0	NaN	5110	3625	8732
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8738	26.919	NaN	2222.3	30	0	175.54	0.106			+	21185	KLASSGHSHF	10	67	535.7710464516917	1069.5275399701834	2	535.7699584960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KLASSGHSHF_	REV__ENST00000437289.1_1_10:2544043-2579735:+|nuORF	54.776311868738084	0.41334902933431344	5				NaN	NaN	0	NaN	5111	3625	8732
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8739	26.921	NaN	1167.4	30	0	96.232	0.039	+			33127	REPEEITEEPS	11	59	658.3002939314906	NaN	0	658.2998657226562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_REPEEITEEPS_	ENSG00000158691|ENST00000684592|ZSCAN12;nc|ENSG00000158691|O43309-2|ZSCAN12	21.68575002086885	0.456735970842152	5				NaN	NaN	0	NaN	5112	3625	8732
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8747	26.941	NaN	9971.7	30	0	1033.3	0.214	+			25591	LQHRVFIQ	8	73	520.8040034611466	1039.5934539890932	2	520.8032836914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LQHRVFIQ_	ENST00000526586.6_1_16:2012076-2012115:-|nuORF	76.7741389293348	0.3504530765139327	5				NaN	NaN	0	NaN	5117	3628	8746
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8748	26.944	NaN	7882.9	30	0	3194.6	0.106			+	-1	AAVANGCNLQH	11	56	385.5164735688644	1153.5275913067933	3	385.515869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_AAVANGC(Carbamidomethyl (C))NLQH_	REV__ENSG00000214279|ENST00000640237|SCART1;REV__ENST00000463137.5_1_10:135271820-135273512:+|nuORF;REV__ENST00000482993.6_3_10:135272457-135273512:+|nuORF;REV__ENST00000488261.6_3_10:135271820-135304727:+|nuORF;REV__nc|ENSG00000214279|Q4G0T1-3|SCART1	30.568863376406313	0.6691487505135859	5				NaN	NaN	0	NaN	5118	3628	8746
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8749	26.946	NaN	2996.6	30	0	504.7	0.106	+			18356	IQNDRQLQY	9	70	589.3024569761465	1176.5903610190928	2	589.3013916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IQNDRQLQY_	ENSG00000100109|ENST00000407690|TFIP11;TFIP11|p.N538Tfs*75|1|0.26|ENSG00000100109|chr22:26496309-26496309|T/-|frameshift_variant	65.46538089061403	0.16805504838372562	5				NaN	NaN	0	NaN	5119	3628	8746
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8750	26.948	NaN	2512.8	30	0	422.85	0.106	+			1268	AESFNFSSSGR	11	63	594.768573377231	1187.5225938212618	2	594.7675170898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AESFNFSSSGR_	ENSG00000162927|ENST00000316752|PUS10	36.31764250033197	0.6083289427130232	5				NaN	NaN	0	NaN	5120	3628	8746
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8751	26.95	NaN	4994.8	30	0	1244.9	0.106	+			51225	YPVEHPDKF	9	57	377.8545552216043	1130.541836265013	3	378.1880798339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YPVEHPDKF_	ENSG00000165280|ENST00000358901|VCP;ENST00000493886.5_1_9:35057116-35062147:-|nuORF	42.86426827375447	0.38666266728046506	5				NaN	NaN	0	NaN	5121	3628	8746
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8752	26.952	NaN	1503	30	0	235.37	0.106	+			45336	TVSKFMAIQK	10	65	576.8269520728153	1151.6393512124305	2	576.8258666992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TVSKFMAIQK_	ENSG00000151576|ENST00000281273|QTRT2;ENST00000467703.1_1_3:113789475-113795805:+|nuORF;nc|ENSG00000151576|Q9H974-2|QTRT2;nc|ENSG00000151576|Q9H974-3|QTRT2;nc|ENSG00000151576|Q9H974-4|QTRT2	53.59686742100583	0.4240759338601513	5				NaN	NaN	0	NaN	5122	3628	8746
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8753	26.953	NaN	1718.8	30	0	201.92	0.035			+	-1	QMLLKLTE	8	59	496.2777404785156	NaN	0	496.2777404785156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_QM(Oxidation (M))LLKLTE_	REV__ENSG00000129696|ENST00000431156|TTI2;REV__ENST00000519356.1_1_8:33331766-33367302:-|nuORF	45.9519527083369	1.7418937515398478	5				NaN	NaN	0	NaN	5123	3628	8746
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8766	26.981	NaN	8829.5	30	0	1332.9	0.214				-1	 	0	60	472.7751311833999	943.5357094335998	2	472.77386474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5133	3631	8765
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8767	26.985	NaN	5522.9	30	0	629.08	0.106	+			15452	GTYVGLTCK	9	60	499.75333514607155	997.4921173589431	2	499.75213623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GTYVGLTC(Carbamidomethyl (C))K_	ENSG00000221926|ENST00000649191|TRIM16;nc|ENSG00000221926|O95361-2|TRIM16;nc|ENSG00000291110|Q309B1|TRIM16L	61.691277971877994	0.19951612995419254	5				NaN	NaN	0	NaN	5134	3631	8765
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8768	26.987	NaN	2606.8	30	0	654.25	0.106	+			14155	GSMTVVTVK	9	49	461.2581402068329	920.5017274804658	2	461.2567443847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GSMTVVTVK_	ENSG00000001461|ENST00000374399|NIPAL3;nc|ENSG00000001461|Q6P499-2|NIPAL3	98.58198989935565	0.04066992115528678	5				NaN	NaN	0	NaN	5135	3631	8765
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8769	26.989	NaN	1950.3	30	0	420.52	0.106	+			38741	SSLPGVFKK	9	56	481.78816247125616	961.5617720093123	2	481.78656005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSLPGVFKK_	ENSG00000122707|ENST00000377966|RECK;ENST00000475774.5_1_9:36036951-36066822:+|nuORF;ENST00000479053.1_1_9:36036974-36085209:+|nuORF;RECK|p.K442Nfs*27|1|0.1|ENSG00000122707|chr9:36102116-36102116|A/-|frameshift_variant;RECK|p.N685Tfs*12|2|0.31|ENSG00000122707|chr9:36112464-36112464|A/-|frameshift_variant	44.116797842482775	0.37197099687881774	5				NaN	NaN	0	NaN	5136	3631	8765
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8770	26.99	NaN	4198.6	30	0	1660	0.106			+	38041	SPPVVHHVPRQ	11	74	626.8498827113724	1251.6852124895447	2	626.8480224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SPPVVHHVPRQ_	REV__ENSG00000131149|ENST00000253458|GSE1;REV__GSE1|p.P1093Qfs*45|1|0.45|ENSG00000131149|chr16:85668282-85668282|C/-|frameshift_variant;REV__nc|ENSG00000131149|Q14687-2|GSE1;REV__nc|ENSG00000131149|Q14687-3|GSE1	45.97224482568171	0.4762245054624163	5				NaN	NaN	0	NaN	5137	3631	8765
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8771	26.992	NaN	1671.5	30	0	166.95	0.106	+			2791	ARRKTNMVI	9	55	544.8196138579328	NaN	0	544.8189697265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ARRKTNMVI_	ENST00000398988.7_2_17:25950782-25950866:+|nuORF	36.446750945000026	0.29355505452396785	5				NaN	NaN	0	NaN	5138	3631	8765
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8772	26.994	NaN	2937.8	30	0	852.99	0.036	+			7671	DLDLKLQLT	9	37	353.5410461425781	NaN	0	353.5410461425781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DLDLKLQLT_	ENST00000591601.5_1_19:2038744-2038972:-|nuORF	17.468008924990375	0.37786057458515737	5				NaN	NaN	0	NaN	5139	3631	8765
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8784	27.019	NaN	6870.3	30	0	915.76	0.215			+	23450	LADSFSRLF	9	67	528.2788581892785	1054.5431634453569	2	528.2780151367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LADSFSRLF_	REV__ENSG00000179044|ENST00000314586|EXOC3L1	87.69643885390035	0.07135982304947239	5				NaN	NaN	0	NaN	5148	3634	8783
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8785	27.023	NaN	3512.6	30	0	912.54	0.106	+			29769	PHYTTFDG	8	60	469.20711726123295	936.3996815892659	2	469.2056579589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PHYTTFDG_	ENSG00000275395|ENST00000616721|FCGBP;ENSG00000275395|ENST00000616721|FCGBP;ENSG00000275395|ENST00000616721|FCGBP;FCGBP-ACSS2|1|fusion;FCGBP-ACSS2|1|fusion;FCGBP-ACSS2|1|fusion;FCGBP-ACSS2|1|fusion;nc|ENSG00000275395|Q9Y6R7|FCGBP;nc|ENSG00000275395|Q9Y6R7|FCGBP;nc|ENSG00000275395|Q9Y6R7|FCGBP;nc|ENSG00000275395|Q9Y6R7|FCGBP	97.47269410471826	0.25484828363392314	5				NaN	NaN	0	NaN	5149	3634	8783
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8786	27.025	NaN	2184.3	30	0	123.05	0.106	+			43238	TEVQLQQKV	9	62	536.8035135268708	NaN	0	536.80322265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TEVQLQQKV_	ENSG00000173230|ENST00000614479|GOLGB1;GOLGB1|p.D2495Tfs*21|1|0.22|ENSG00000173230|chr3:121691867-121691867|T/-|frameshift_variant;GOLGB1|p.K2450Rfs*27|1|0.37|ENSG00000173230|chr3:121692000-121692000|T/-|frameshift_variant;nc|ENSG00000173230|Q14789-2|GOLGB1;nc|ENSG00000173230|Q14789-3|GOLGB1;nc|ENSG00000173230|Q14789-4|GOLGB1;nc|ENSG00000173230|Q14789|GOLGB1	85.86182877749512	0.05129763505578642	5				NaN	NaN	0	NaN	5150	3634	8783
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8787	27.027	NaN	1154.4	30	0	105.55	0.106	+			1240	AERLGNFCR	9	55	533.2637600557576	NaN	0	533.2637329101562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AERLGNFCR_	ENSG00000159433|ENST00000290607|STARD9;ENST00000562619.1_1_15:42986519-43010984:+|nuORF	29.14955571784316	0.3303970763161698	5				NaN	NaN	0	NaN	5151	3634	8783
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8788	27.029	NaN	3878.4	30	0	1936.9	0.106			+	8759	EEGDFIVKLPK	11	48	425.5705203783744	1273.6897317353232	3	425.5694885253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EEGDFIVKLPK_	REV__ENSG00000138641|ENST00000402738|HERC3	38.714083909724	0.5755383074156426	5				NaN	NaN	0	NaN	5152	3634	8783
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8789	27.03	NaN	1162.9	30	0	163.24	0.106	+			16887	HPHQNLIATY	10	49	597.3071899414062	NaN	0	597.3071899414062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HPHQNLIATY_	ENSG00000122692|ENST00000397149|SMU1;nc|ENSG00000122692|Q2TAY7-2|SMU1	39.252832667884924	0.37128895876774715	5				NaN	NaN	0	NaN	5153	3634	8783
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8790	27.032	NaN	933.86	30	0	115.42	0.038	+			30127	PRRGTVMYVGA	11	43	603.8253173828125	NaN	0	603.8253173828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PRRGTVMYVGA_	ENST00000392178.8_1_19:36606435-36612715:+|nuORF;ENST00000589308.1_1_19:36606815-36612715:+|nuORF	29.170058357718403	0.43541742044178583	5				NaN	NaN	0	NaN	5154	3634	8783
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8802	27.058	NaN	2720.3	30	0	284.55	0.214	+			36702	SGSATIYGHDI	11	66	560.7666692323969	1119.5187855315937	2	560.7669677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SGSATIYGHDI_	ABCA2|p.G2110Afs*11|1|0.41|ENSG00000107331|chr9:137010217-137010217|C/-|frameshift_variant;ENSG00000107331|ENST00000341511|ABCA2;ENST00000459850.5_1_9:139905575-139923366:-|nuORF;ENST00000487109.5_1_9:139906084-139911410:-|nuORF;nc|ENSG00000107331|Q9BZC7-2|ABCA2;nc|ENSG00000107331|Q9BZC7-4|ABCA2;nc|ENSG00000107331|Q9BZC7|ABCA2	37.81151784470057	0.5878881669006212	5				NaN	NaN	0	NaN	5163	3637	8801
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8803	27.061	NaN	2280.3	30	0	308.83	0.106			+	7033	CSLTGIKE	8	55	454.23249368280705	906.4504344324141	2	454.23089599609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_C(Carbamidomethyl (C))SLTGIKE_	REV__ENSG00000254685|ENST00000370898|FPGT;REV__nc|ENSG00000254685|O14772|FPGT	66.42927471994793	0.4381325844043345	5				NaN	NaN	0	NaN	5164	3637	8801
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8804	27.063	NaN	2948.7	30	0	240.16	0.106	+			28381	NELIRQEKL	9	68	571.830909112029	1141.6472652908578	2	571.8306884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NELIRQEKL_	ENSG00000070182|ENST00000644917|SPTB;ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000070182|P11277-3|SPTB;nc|ENSG00000070182|P11277|SPTB;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1;SPTBN1|p.K503Rfs*24|1|0.06|ENSG00000115306|chr2:54626095-54626095|G/-|frameshift_variant	90.36981228632155	0.0638227155548745	5				NaN	NaN	0	NaN	5165	3637	8801
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8805	27.065	NaN	1416	30	0	333.34	0.106	+			39392	STDNLLVNK	9	62	502.2752204410687	1002.5358879489374	2	502.2749328613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STDNLLVNK_	ENSG00000083093|ENST00000261584|PALB2;PALB2|p.E1010*|1|0.26|ENSG00000083093|chr16:23621448-23621449|-/G|frameshift_variant;PALB2|p.L1006Ffs*5|1|0.3|ENSG00000083093|chr16:23621457-23621458|-/A|frameshift_variant	76.16968421966216	0.11411088698345859	5				NaN	NaN	0	NaN	5166	3637	8801
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8806	27.067	NaN	1591.2	30	0	201.23	0.106	+			9933	EQVQEQVKL	9	68	550.8020629882812	NaN	0	550.8020629882812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EQVQEQVKL_	ENSG00000130449|ENST00000252744|ZSWIM6;ZSWIM6|p.E613Rfs*5|1|0.2|ENSG00000130449|chr5:61526387-61526388|-/A|frameshift_variant;ZSWIM6|p.E613Sfs*7|1|0.32|ENSG00000130449|chr5:61526388-61526388|A/-|frameshift_variant	51.19269402634007	0.19847346126499396	5				NaN	NaN	0	NaN	5167	3637	8801
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8807	27.069	NaN	1008.2	30	0	91.979	0.106	+			51283	YRVVSTFGVV	10	49	563.8182373046875	NaN	0	563.8182373046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YRVVSTFGVV_	CHD9|p.M2707Tfs*40|1|0.1|ENSG00000177200|chr16:53324320-53324321|-/C|frameshift_variant;CHD9|p.R2541Kfs*9|1|0.11|ENSG00000177200|chr16:53318242-53318243|-/A|frameshift_variant;CHD9|p.R2632Dfs*28|1|0.35|ENSG00000177200|chr16:53324090-53324090|G/-|frameshift_variant;ENSG00000177200|ENST00000447540|CHD9;nc|ENSG00000177200|Q3L8U1-2|CHD9;nc|ENSG00000177200|Q3L8U1-3|CHD9	32.75053402867276	0.3926392905881664	5				NaN	NaN	0	NaN	5168	3637	8801
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8808	27.07	NaN	1080.3	30	0	95.48	0.034	+			17347	IAKFSTPPA	9	51	466.2643789920566	930.5142050509132	2	466.26397705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IAKFSTPPA_	ENSG00000185697|ENST00000522677|MYBL1;MYBL1|p.E593Rfs*14|1|0.3|ENSG00000185697|chr8:66566944-66566945|-/T|frameshift_variant;nc|ENSG00000185697|P10243-2|MYBL1	58.78195531508484	0.22376836668196862	5				NaN	NaN	0	NaN	5169	3637	8801
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8820	27.096	NaN	4946.2	30	0	894.56	0.214	+			40567	SVAECQLMK	9	61	533.2581507359256	1064.501748538651	2	533.2572021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SVAEC(Carbamidomethyl (C))QLMK_	ENSG00000105221|ENST00000392038|AKT2;ENST00000391844.8_1_19:40739781-40791100:-|nuORF;ENST00000537834.5_1_19:40745726-40771198:-|nuORF;nc|ENSG00000105221|P31751-2|AKT2	109.47833844074708	0.029530294723441826	5				NaN	NaN	0	NaN	5178	3640	8819
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8821	27.1	NaN	3034.8	30	0	718.74	0.106	+			6297	AVSTFAMVK	9	53	485.2588008548364	968.5030487764728	2	485.2571716308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_AVSTFAM(Oxidation (M))VK_	ENSG00000172893|ENST00000355527|DHCR7;ENST00000534701.1_1_11:71149825-71152361:-|nuORF	98.62937762414208	0.04060045538121712	5				NaN	NaN	0	NaN	5179	3640	8819
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8822	27.102	NaN	4210.9	30	0	411.51	0.106	+			48400	VTIFIRGGNK	10	73	552.831335178154	1103.6481174231078	2	552.83056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTIFIRGGNK_	ENSG00000150753|ENST00000280326|CCT5;ENST00000423695.6_1_5:10250480-10261980:+|nuORF;nc|ENSG00000150753|P48643-2|CCT5	97.59673978297657	0.0875810153152853	5				NaN	NaN	0	NaN	5180	3640	8819
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8823	27.103	NaN	1711.6	30	0	156.96	0.106			+	50808	YEQVIKKV	8	63	503.8005835787485	NaN	0	503.8005676269531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YEQVIKKV_	REV__ENSG00000162643|ENST00000294664|DNAI3;REV__nc|ENSG00000162643|Q8IWG1-2|DNAI3	47.91560031466742	1.7418937515398478	5				NaN	NaN	0	NaN	5181	3640	8819
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8824	27.105	NaN	1132.7	30	0	270.27	0.106				-1	MSDRSGPTA	9	48	469.20711726123295	936.3996815892659	2	469.7076721191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_M(Oxidation (M))SDRSGPTA_	ENSG00000204469|ENST00000376033|PRRC2A;nc|ENSG00000204469|P48634-2|PRRC2A;nc|ENSG00000204469|P48634-3|PRRC2A;nc|ENSG00000204469|P48634-4|PRRC2A;PRRC2A|p.A1596Gfs*24|1|0.1|ENSG00000204469|chr6:31634300-31634301|-/G|frameshift_variant;PRRC2A|p.G1731Wfs*35|1|0.59|ENSG00000204469|chr6:31635155-31635156|-/C|frameshift_variant;PRRC2A|p.G1884Afs*12|1|0.18|ENSG00000204469|chr6:31636228-31636228|C/-|frameshift_variant;PRRC2A|p.K1685Rfs*9|1|0.21|ENSG00000204469|chr6:31634864-31634864|C/-|frameshift_variant;PRRC2A|p.P126Qfs*14|1|0.31|ENSG00000204469|chr6:31624343-31624343|C/-|frameshift_variant;PRRC2A|p.R284Vfs*14|1|0.17|ENSG00000204469|chr6:31626023-31626023|T/-|frameshift_variant;PRRC2A|p.R477Afs*94|1|0.28|ENSG00000204469|chr6:31627901-31627901|G/-|frameshift_variant;PRRC2A|p.T807Nfs*10|1|0.5|ENSG00000204469|chr6:31630754-31630755|-/A|frameshift_variant	40.77816245573522	0.41113185337114944	5				NaN	NaN	0	NaN	5182	3640	8819
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8825	27.107	NaN	2187.6	30	0	544.46	0.106			+	1585	AGKLVFPYI	9	34	336.5347674795667	1006.5824730389002	3	336.8684997558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AGKLVFPYI_	REV__tr|U7SUG2|U7SUG2_FUSNUAcylcarrierproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01144PE=4SV=1	20.94693142431847	0.6074874384046576	5				NaN	NaN	0	NaN	5183	3640	8819
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8826	27.109	NaN	2077.2	30	0	282.2	0.036			+	-1	CLLSCPTPIS	10	61	545.7655150947712	1089.5164772563423	2	545.7644653320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_CLLSC(Carbamidomethyl (C))PTPIS_	REV__KIT|p.N511Kfs*17|1|0.06|ENSG00000157404|chr4:54726041-54726042|-/AG|frameshift_variant	42.396135135203025	0.5270658956260207	5				NaN	NaN	0	NaN	5184	3640	8819
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8838	27.134	NaN	2392.6	30	0	706.69	0.214	+			17316	IAFPITTI	8	52	438.2648390123607	874.5151250915214	2	438.263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IAFPITTI_	tr|U7SU85|U7SU85_FUSNUMultidrugexportproteinMepAOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01059PE=3SV=1	37.028477286268924	0.6747514403204248	5				NaN	NaN	0	NaN	5193	3643	8837
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8839	27.138	NaN	2141.8	30	0	329.79	0.106			+	-1	PSVYMLMIA	9	62	528.7568512258615	1055.499149518523	2	528.7572021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Oxidation (M)	_PSVYM(Oxidation (M))LM(Oxidation (M))IA_	REV__nc|ENSG00000258806|Q8NGC8|OR11H7	40.5726180659479	0.4135428067754104	5				NaN	NaN	0	NaN	5194	3643	8837
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8840	27.14	NaN	2121.3	30	0	203.28	0.106				-1	MRSTLTGKNA	10	62	547.7840997108041	1093.553646488408	2	547.78369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))RSTLTGKNA_	ENSG00000168702|ENST00000389484|LRP1B;LRP1B|p.C2682Vfs*15|1|0.3|ENSG00000168702|chr2:140516994-140516994|A/-|frameshift_variant;LRP1B|p.C3762Lfs*2|1|0.32|ENSG00000168702|chr2:140358089-140358090|-/A|frameshift_variant;LRP1B|p.G4130Mfs*20|1|0.06|ENSG00000168702|chr2:140324019-140324020|-/AT|frameshift_variant;LRP1B|p.H4368Tfs*4|1|0.47|ENSG00000168702|chr2:140274465-140274465|C/-|frameshift_variant;LRP1B|p.I3028Nfs*2|1|0.39|ENSG00000168702|chr2:140492645-140492646|-/T|frameshift_variant;LRP1B|p.K2543Nfs*42|1|0.08|ENSG00000168702|chr2:140536594-140536594|T/-|frameshift_variant;LRP1B|p.N3100Kfs*6|1|0.21|ENSG00000168702|chr2:140485468-140485469|-/T|frameshift_variant;LRP1B|p.N3434Tfs*84|1|0.47|ENSG00000168702|chr2:140442617-140442617|T/-|frameshift_variant;LRP1B|p.N4135Mfs*14|1|0.13|ENSG00000168702|chr2:140324003-140324003|T/-|frameshift_variant;LRP1B|p.R3957Kfs*11|2|0.15|ENSG00000168702|chr2:140350819-140350820|-/T|frameshift_variant;LRP1B|p.T2640Pfs*5|1|0.12|ENSG00000168702|chr2:140525952-140525952|T/-|frameshift_variant;LRP1B|p.Y3120*|1|0.16|ENSG00000168702|chr2:140485402-140485408|AGTAGGG/-|frameshift_variant	72.2432373244024	0.2589930451692646	5				NaN	NaN	0	NaN	5195	3643	8837
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8841	27.141	NaN	1558.5	30	0	130.68	0.106				-1	ALCAPLFLPQ	10	67	565.3066212107457	1128.5986894882913	2	565.306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_ALC(Carbamidomethyl (C))APLFLPQ_	ENSG00000054690|ENST00000329153|PLEKHH1	45.9519527083369	0.4943008177357963	5				NaN	NaN	0	NaN	5196	3643	8837
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8842	27.143	NaN	1646	30	0	157.5	0.037	+			27647	MPRVQTQQY	9	52	575.7886282387303	1149.5627035442606	2	575.7891235351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MPRVQTQQY_	ENSG00000138674|ENST00000395310|SEC31A;nc|ENSG00000138674|O94979-10|SEC31A;nc|ENSG00000138674|O94979-2|SEC31A;nc|ENSG00000138674|O94979-3|SEC31A;nc|ENSG00000138674|O94979-4|SEC31A;nc|ENSG00000138674|O94979-6|SEC31A;nc|ENSG00000138674|O94979-7|SEC31A;nc|ENSG00000138674|O94979-8|SEC31A;nc|ENSG00000138674|O94979-9|SEC31A;SEC31A|p.P1058Qfs*62|1|0.4|ENSG00000138674|chr4:82827487-82827487|G/-|frameshift_variant	35.15202426646627	0.4747332964206883	5				NaN	NaN	0	NaN	5197	3643	8837
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8855	27.171	NaN	10893	30	0	2422.6	0.214				-1	 	0	63	509.3017214544453	1016.5888899756907	2	509.3003845214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5207	3646	8854
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8856	27.174	NaN	7027.6	30	0	693.24	0.106	+			12471	GEDKTSAQVSL	11	70	567.7866862470345	1133.5588195608689	2	567.785400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEDKTSAQVSL_	ENSG00000110002|ENST00000456829|VWA5A;nc|ENSG00000110002|O00534-2|VWA5A;nc|ENSG00000110002|O00534-3|VWA5A;nc|ENSG00000110002|O00534-4|VWA5A;VWA5A|p.D273Ifs*24|1|0.19|ENSG00000110002|chr11:124123014-124123014|A/-|frameshift_variant;VWA5A|p.D571Mfs*3|1|0.56|ENSG00000110002|chr11:124137094-124137094|A/-|frameshift_variant;VWA5A|p.G366Afs*38|1|0.21|ENSG00000110002|chr11:124123733-124123733|G/-|frameshift_variant	105.16503226865211	0.050009141116738	5				NaN	NaN	0	NaN	5208	3646	8854
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8857	27.176	NaN	3857.6	30	0	457.13	0.106	+			21232	KLIDRTESL	9	60	537.8126221906459	1073.6106914480918	2	537.8115844726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KLIDRTESL_	ENSG00000130592|ENST00000311604|LSP1;ENST00000485341.5_1_11:1902588-1908790:+|nuORF;nc|ENSG00000130592|P33241-2|LSP1;nc|ENSG00000130592|P33241-3|LSP1	61.691277971877994	0.19951612995419254	5				NaN	NaN	0	NaN	5209	3646	8854
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8858	27.178	NaN	1590.8	30	0	182.95	0.106				-1	 	0	44	322.19421647546835	642.3738800177367	2	322.193603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5210	3646	8854
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8859	27.18	NaN	8741.3	30	0	4476.7	0.106			+	13464	GLKRDLRWK	9	55	391.2405314866172	1170.6997650600517	3	391.239501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GLKRDLRWK_	REV__ENSG00000140090|ENST00000532405|SLC24A4;REV__ENST00000525557.5_2_14:92959235-92959969:+|nuORF;REV__ENST00000526482.1_1_14:92920194-92959969:+|nuORF;REV__nc|ENSG00000140090|Q8NFF2-2|SLC24A4;REV__nc|ENSG00000140090|Q8NFF2-3|SLC24A4;REV__nc|ENSG00000140090|Q8NFF2-4|SLC24A4	25.57405402267927	0.5642445186134241	5				NaN	NaN	0	NaN	5211	3646	8854
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8860	27.182	NaN	2689	30	0	231.51	0.036	+			25426	LPMEAGLVEF	10	60	553.2815023479627	1104.5484517627253	2	553.280029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LPMEAGLVEF_	ENSG00000087253|ENST00000262134|LPCAT2;ENST00000566375.1_1_16:55583234-55585020:+|nuORF;nc|ENSG00000087253|Q7L5N7-2|LPCAT2	94.00642277110589	0.10813630424565351	5				NaN	NaN	0	NaN	5212	3646	8854
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8861	27.182	NaN	4234.3	30	0	1076.6	0.146				-1	 	0	51	414.24780006857924	1239.7215708059377	3	414.24652099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5213	3646	8854
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8872	27.212	NaN	5474.3	30	0	938.31	0.214	+			16962	HPQAINQQF	9	69	541.7731575182526	NaN	0	541.7731323242188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HPQAINQQF_	ENSG00000119042|ENST00000417098|SATB2;ENST00000483346.2_1_2:200213306-200233427:-|nuORF;nc|ENSG00000119042|Q9UPW6-2|SATB2	68.78682469695295	0.1118430353446351	5				NaN	NaN	0	NaN	5221	3649	8871
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8873	27.216	NaN	4590.3	30	0	715.73	0.106	+			40988	SVGLVYWEI	9	67	533.2838351360587	1064.5531173389172	2	533.2831420898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVGLVYWEI_	ENSG00000123612|ENST00000243349|ACVR1C;nc|ENSG00000123612|Q8NER5-2|ACVR1C;nc|ENSG00000123612|Q8NER5-3|ACVR1C;nc|ENSG00000123612|Q8NER5-4|ACVR1C	53.351449002276354	0.2690372970092375	5				NaN	NaN	0	NaN	5222	3649	8871
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8874	27.218	NaN	2230.9	30	0	311.63	0.106	+			23384	LAADCAHEL	9	57	500.23285456617424	998.4511561991485	2	500.23187255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LAADC(Carbamidomethyl (C))AHEL_	ENSG00000157379|ENST00000288111|DHRS1;ENST00000558340.1_1_14:24760067-24761569:-|nuORF;ENST00000561137.5_1_14:24760413-24761527:-|nuORF;ENST00000561273.5_1_14:24760714-24761569:-|nuORF	45.9519527083369	0.35044536499095585	5				NaN	NaN	0	NaN	5223	3649	8871
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8875	27.22	NaN	2872	30	0	175.2	0.106	+			8835	EELQNVQRV	9	62	557.7970933053881	1113.579633677576	2	557.7969360351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EELQNVQRV_	ENSG00000166920|ENST00000396650|C15orf48	83.6470233535746	0.08277643980271215	5				NaN	NaN	0	NaN	5224	3649	8871
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8876	27.221	NaN	1155.8	30	0	94.215	0.106	+			25351	LPERTVIQ	8	50	478.28216552734375	NaN	0	478.28216552734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LPERTVIQ_	ENSG00000196547|ENST00000559717|MAN2A2;ENST00000560192.5_1_15:91447248-91454469:+|nuORF;ENST00000560505.1_1_15:91454331-91454469:+|nuORF;MAN2A2|p.V832Rfs*6|1|0.43|ENSG00000196547|chr15:90912894-90912895|-/C|frameshift_variant;nc|ENSG00000196547|P49641-1|MAN2A2;nc|ENSG00000196547|P49641-2|MAN2A2	57.81127852772723	1.7418937515398478	5				NaN	NaN	0	NaN	5225	3649	8871
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8877	27.223	NaN	1631	30	0	212.49	0.106			+	39045	SSSPLERKLT	10	41	373.20986804550216	NaN	0	373.20977783203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSSPLERKLT_	REV__ENSG00000134627|ENST00000299001|PIWIL4;REV__nc|ENSG00000134627|Q7Z3Z4-2|PIWIL4;REV__nc|ENSG00000134627|Q7Z3Z4-3|PIWIL4;REV__PIWIL4|p.V774Wfs*21|1|0.16|ENSG00000134627|chr11:94620021-94620021|G/-|frameshift_variant	32.81241826257853	0.3924360933802784	5				NaN	NaN	0	NaN	5226	3649	8871
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8878	27.225	NaN	1947.4	30	0	437.51	0.036	+			7804	DPIGGHIHSY	10	61	548.2655931618302	1094.5166333904604	2	548.2642822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DPIGGHIHSY_	ENSG00000136286|ENST00000258787|MYO1G;ENST00000480503.5_1_7:45014700-45018578:-|nuORF;ENST00000483585.5_1_7:45011810-45018578:-|nuORF;nc|ENSG00000136286|B0I1T2-2|MYO1G;nc|ENSG00000136286|B0I1T2-3|MYO1G;nc|ENSG00000136286|B0I1T2-4|MYO1G	54.776311868738084	0.41334902933431344	5				NaN	NaN	0	NaN	5227	3649	8871
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8893	27.257	NaN	3156.4	30	0	236.44	0.214	+			11216	FIAREPLGG	9	58	480.268425003866	958.522297074532	2	480.26715087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FIAREPLGG_	nc|ENSG00000157110|Q93062-4|RBPMS	60.97194046774394	0.20551255781574032	5				NaN	NaN	0	NaN	5239	3652	8892
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8894	27.26	NaN	3123.2	30	0	549.06	0.106	+			19687	KDPVKLLK	8	59	470.814248055886	939.6139431785721	2	470.81353759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KDPVKLLK_	DNAJC13|p.G1667Vfs*22|1|0.33|ENSG00000138246|chr3:132505410-132505410|A/-|frameshift_variant;DNAJC13|p.T1375Hfs*28|1|0.18|ENSG00000138246|chr3:132496626-132496626|A/-|frameshift_variant;ENSG00000138246|ENST00000260818|DNAJC13	40.77816245573522	0.6514838689002179	5				NaN	NaN	0	NaN	5240	3652	8892
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8895	27.263	NaN	3730.1	30	0	551.86	0.106	+			39301	STASMGGWTK	10	57	513.2409700586849	1024.4673871841696	2	513.2407836914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STASMGGWTK_	ENSG00000166348|ENST00000687698|USP54;ENST00000498143.5_1_10:75279553-75335416:-|nuORF;nc|ENSG00000166348|Q70EL1-6|USP54;nc|ENSG00000166348|Q70EL1-7|USP54;USP54|p.R831Tfs*6|1|0.07|ENSG00000166348|chr10:73519973-73519983|CAGGGCAAGTC/-|frameshift_variant	89.02883481214508	0.13663399911061233	5				NaN	NaN	0	NaN	5241	3652	8892
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8896	27.264	NaN	1911.8	30	0	365.67	0.106			+	45334	TVSIASSVLQ	10	55	502.7860926942112	1003.5576324552225	2	502.7847900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TVSIASSVLQ_	REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-10|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-13|TTN;REV__nc|ENSG00000155657|Q8WZ42-2|TTN;REV__nc|ENSG00000155657|Q8WZ42-3|TTN;REV__nc|ENSG00000155657|Q8WZ42-4|TTN;REV__nc|ENSG00000155657|Q8WZ42-5|TTN;REV__nc|ENSG00000155657|Q8WZ42-7|TTN;REV__nc|ENSG00000155657|Q8WZ42-8|TTN;REV__nc|ENSG00000155657|Q8WZ42-9|TTN;REV__nc|ENSG00000155657|Q8WZ42|TTN;REV__TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;REV__TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;REV__TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant	47.657333605630114	0.47858658696240314	5				NaN	NaN	0	NaN	5242	3652	8892
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8897	27.266	NaN	1374.8	30	0	129.49	0.106				-1	AIGGQKVNMP	10	62	515.7703247070312	NaN	0	515.7703247070312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_AIGGQKVNM(Oxidation (M))P_	ENSG00000162396|ENST00000371279|PARS2	42.396135135203025	0.3536752194735987	5				NaN	NaN	0	NaN	5243	3652	8892
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8898	27.268	NaN	1211	30	0	101.3	0.034			+	34781	RYKDSTGF	8	54	487.24167840762806	972.4688038820561	2	487.24078369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RYKDSTGF_	REV__ENSG00000129667|ENST00000675367|RHBDF2;REV__ENST00000590168.5_1_17:74467717-74469013:-|nuORF;REV__nc|ENSG00000129667|Q6PJF5|RHBDF2	53.351449002276354	0.5676011784961348	5				NaN	NaN	0	NaN	5244	3652	8892
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8914	27.303	NaN	9440.5	30	0	4794.7	0.214	+			48688	VTTGGMVLK	9	55	453.2607936668354	904.5070344004708	2	453.2600402832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTTGGMVLK_	ENSG00000173369|ENST00000509305|C1QB;nc|ENSG00000173369|P02746|C1QB	69.6276240434122	0.14239879520340665	5				NaN	NaN	0	NaN	5257	3655	8913
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8915	27.306	NaN	1470	30	0	155.99	0.106	+			4780	ATNGPPVLVK	10	50	498.29889394202866	994.5832349508573	2	498.2980651855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATNGPPVLVK_	ENSG00000170004|ENST00000330494|CHD3;ENST00000439235.5_1_17:7812698-7814900:+|nuORF;ENST00000470531.5_3_17:7807732-7814900:+|nuORF;ENST00000481999.1_1_17:7813558-7814900:+|nuORF;nc|ENSG00000170004|Q12873-2|CHD3;nc|ENSG00000170004|Q12873-3|CHD3	46.45678178249821	0.4896490706773647	5				NaN	NaN	0	NaN	5258	3655	8913
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8916	27.308	NaN	1412.6	30	0	113.07	0.106	+			41408	SVMRPEQIMK	10	54	609.8210884455535	1217.627623957907	2	609.8209838867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVMRPEQIMK_	ENSG00000185883|ENST00000330398|ATP6V0C	40.015381236134715	0.549003350328366	5				NaN	NaN	0	NaN	5259	3655	8913
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8917	27.31	NaN	3716.7	30	0	334.92	0.034			+	23702	LATQGLTVQ	9	61	465.767229234087	929.519905534974	2	465.7669677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LATQGLTVQ_	REV__ENST00000494437.1_1_1:11805926-11806319:+|nuORF	63.53385203322761	0.18415635464017938	5				NaN	NaN	0	NaN	5260	3655	8913
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8930	27.338	NaN	12963	30	0	1281.2	0.212			+	11459	FNFGTTSEDFR	11	82	660.7957208353937	1319.5768887375873	2	660.7943115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FNFGTTSEDFR_	REV__ENSG00000185304|ENST00000398146|RGPD2;REV__ENSG00000187627|ENST00000641458|RGPD1;REV__nc|ENSG00000187627|P0DJD0|RGPD1;REV__RGPD2|p.F1350Lfs*25|1|0.25|ENSG00000185304|chr2:87782974-87782974|A/-|frameshift_variant	78.26377905018397	0.16684720679201295	5				NaN	NaN	0	NaN	5270	3658	8929
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8931	27.342	NaN	5729.1	30	0	1054.6	0.106	+			36501	SEYIHAQVA	9	63	509.2543931671386	1016.4942334010772	2	509.25335693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEYIHAQVA_	ENSG00000122642|ENST00000242209|FKBP9;ENST00000455909.5_1_7:55750344-55756724:-|nuORF;ENST00000471066.1_1_7:33042511-33044960:+|nuORF;ENST00000475220.1_1_7:33038205-33044960:+|nuORF;nc|ENSG00000122642|O95302-2|FKBP9;nc|ENSG00000122642|O95302-3|FKBP9;nc|ENSG00000291029|Q75LS8|FKBP9P1	62.107414245175825	0.1960472003779324	5				NaN	NaN	0	NaN	5271	3658	8929
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8932	27.344	NaN	4993.6	30	0	631.46	0.106	+			15673	GVMRVGLVAK	10	71	515.3163913346319	1028.6182297360638	2	515.3157958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GVMRVGLVAK_	ENSG00000129351|ENST00000588657|ILF3;ENST00000587928.5_1_19:10781281-10792148:+|nuORF;nc|ENSG00000129351|Q12906-2|ILF3;nc|ENSG00000129351|Q12906-3|ILF3;nc|ENSG00000129351|Q12906-4|ILF3;nc|ENSG00000129351|Q12906-5|ILF3;nc|ENSG00000129351|Q12906-6|ILF3;nc|ENSG00000129351|Q12906|ILF3	87.69643885390035	0.14426223466775756	5				NaN	NaN	0	NaN	5272	3658	8929
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8933	27.346	NaN	7795.4	30	0	592.48	0.106			+	27383	MKKLVKPNE	9	75	543.8200689173167	1085.6255849014333	2	543.8187255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MKKLVKPNE_	REV__ENSG00000176542|ENST00000316407|USF3	109.43880257439609	0.029570636687953285	5				NaN	NaN	0	NaN	5273	3658	8929
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8934	27.347	NaN	3947.7	30	0	1856	0.106			+	9234	EGTHLRQHQL	10	45	406.88336505989616	1217.6282657798886	3	406.8827209472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EGTHLRQHQL_	REV__ENSG00000172888|ENST00000339296|ZNF621	29.170058357718403	0.6416167986984785	5				NaN	NaN	0	NaN	5274	3658	8929
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8935	27.349	NaN	4828.3	30	0	530.55	0.106			+	23287	KYLWETLF	8	69	550.294004344684	1098.573455756168	2	550.293212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KYLWETLF_	REV__ENST00000568126.5_1_16:19729746-19775223:+|nuORF	76.7741389293348	0.3504530765139327	5				NaN	NaN	0	NaN	5275	3658	8929
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8936	27.351	NaN	8982.6	30	0	4177.5	0.036	+			15674	GVMRVGLVAK	10	56	343.8798563051388	1028.6177395156164	3	343.879150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GVMRVGLVAK_	ENSG00000129351|ENST00000588657|ILF3;ENST00000587928.5_1_19:10781281-10792148:+|nuORF;nc|ENSG00000129351|Q12906-2|ILF3;nc|ENSG00000129351|Q12906-3|ILF3;nc|ENSG00000129351|Q12906-4|ILF3;nc|ENSG00000129351|Q12906-5|ILF3;nc|ENSG00000129351|Q12906-6|ILF3;nc|ENSG00000129351|Q12906|ILF3	47.657333605630114	0.47858658696240314	5				NaN	NaN	0	NaN	5276	3658	8929
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8950	27.381	NaN	5000.5	30	0	894.65	0.214	+			46595	VFQEHQTL	8	62	501.25731595903676	1000.5000789848735	2	501.2558898925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VFQEHQTL_	ENSG00000085733|ENST00000301843|CTTN;ENST00000415461.2_1_11:70253665-70266006:+|nuORF;nc|ENSG00000085733|Q14247-2|CTTN;nc|ENSG00000085733|Q14247-3|CTTN	82.24051045832904	0.30490469762271794	5				NaN	NaN	0	NaN	5287	3661	8949
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8951	27.385	NaN	1884.2	30	0	214.16	0.106			+	6731	CALIRVAK	8	56	437.2715280676455	872.528503202091	2	437.2703857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_CALIRVAK_	REV__ENSG00000265972|ENST00000582401|TXNIP	65.80317337860623	0.44433089765398776	5				NaN	NaN	0	NaN	5288	3661	8949
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8952	27.387	NaN	2691.2	30	0	272.33	0.106	+			1168	AENGKSNFL	9	62	490.24710298351675	978.4796530338335	2	490.2457275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AENGKSNFL_	B2M|p.V69Sfs*21|1|0.67|ENSG00000166710|chr15:44715554-44715555|-/A|frameshift_variant;B2M|p.V69Wfs*34|1|0.32|ENSG00000166710|chr15:44715555-44715555|A/-|frameshift_variant;B2M|p.Y98Lfs*5|1|0.08|ENSG00000166710|chr15:44715648-44715648|A/-|frameshift_variant;ENSG00000166710|ENST00000648006|B2M;ENST00000559720.5_1_15:45003705-45007919:+|nuORF	58.2462437865262	0.22823408064396822	5				NaN	NaN	0	NaN	5289	3661	8949
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8953	27.388	NaN	2975.8	30	0	660.71	0.106	+			30650	QATPSHLSL	9	48	477.25729251284287	952.5000320924858	2	477.25616455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QATPSHLSL_	ENST00000290881.11_1_16:67217371-67217884:-|nuORF	60.11826168202944	0.21262886028301267	5				NaN	NaN	0	NaN	5290	3661	8949
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8954	27.39	NaN	1975.5	30	0	238.26	0.106	+			42316	TAFGHPQAY	9	48	496.23609357341934	990.4576342136387	2	496.23486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TAFGHPQAY_	ENSG00000130340|ENST00000392185|SNX9	39.252832667884924	0.4290233611298554	5				NaN	NaN	0	NaN	5291	3661	8949
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8955	27.392	NaN	1890.8	30	0	257.13	0.036				-1	SNCQMEDMT	9	68	537.6816825549644	1073.3488121767286	2	537.6818237304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_SNCQM(Oxidation (M))EDMT_	ENSG00000103994|ENST00000564754|ZNF106;nc|ENSG00000103994|Q9H2Y7|ZNF106;ZNF106|p.S482Pfs*33|1|0.22|ENSG00000103994|chr15:42450759-42450759|A/-|frameshift_variant	25.450171626174864	0.5654022654467333	5				NaN	NaN	0	NaN	5292	3661	8949
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8956	27.393	NaN	1162.3	30	0	197.34	0.141	+			16703	HKVRGWGLR	9	51	554.8280968063862	NaN	0	554.8278198242188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HKVRGWGLR_	ENST00000478150.1_1_16:31045126-31045651:+|nuORF	23.04248740728303	0.3589936788096251	5				NaN	NaN	0	NaN	5293	3661	8949
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8968	27.42	NaN	2957	30	0	481.91	0.214	+			5795	AVHNTAVL	8	48	412.73575596183565	823.4569589904713	2	412.7345886230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVHNTAVL_	ENSG00000100982|ENST00000372409|PCIF1	65.80317337860623	0.44433089765398776	5				NaN	NaN	0	NaN	5302	3664	8967
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8969	27.424	NaN	2547.6	30	0	691.22	0.106				-1	TISYAGCLTQ	10	63	557.2643225889276	1112.514092244655	2	557.7636108398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_TISYAGC(Carbamidomethyl (C))LTQ_	ENSG00000171496|ENST00000641027|OR1L8	45.97224482568171	0.49411383603842696	5				NaN	NaN	0	NaN	5303	3664	8967
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8970	27.426	NaN	2713	30	0	718.59	0.106	+			16906	HPKVAAEGP	9	52	453.24578442806325	904.4770159229265	2	453.24468994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HPKVAAEGP_	ENSG00000175556|ENST00000371628|LONRF3;LONRF3|p.V169Rfs*11|1|0.49|ENSG00000175556|chrX:118975280-118975281|-/C|frameshift_variant;nc|ENSG00000175556|Q496Y0-2|LONRF3;nc|ENSG00000175556|Q496Y0-3|LONRF3	35.61828744233558	0.47037581924408073	5				NaN	NaN	0	NaN	5304	3664	8967
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8971	27.428	NaN	1831.6	30	0	129.68	0.106	+			50698	YEEQHPEL	8	59	522.7368234725245	NaN	0	522.7354125976562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YEEQHPEL_	ENSG00000008517|ENST00000525643|IL32;nc|ENSG00000008517|P24001-3|IL32;nc|ENSG00000008517|P24001-4|IL32;nc|ENSG00000008517|P24001-5|IL32;nc|ENSG00000008517|P24001-6|IL32;nc|ENSG00000008517|P24001|IL32	54.776311868738084	1.7418937515398478	5				NaN	NaN	0	NaN	5305	3664	8967
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8972	27.43	NaN	1331.6	30	0	187.7	0.106	+			51529	YVYEGVEAK	9	60	529.2647094726562	NaN	0	529.2647094726562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YVYEGVEAK_	ENSG00000145384|ENST00000274024|FABP2	49.536043120802724	0.20989033510253738	5				NaN	NaN	0	NaN	5306	3664	8967
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8973	27.431	NaN	3122	30	0	736.73	0.034			+	34142	RSVLSDQI	8	57	459.25719530320384	916.4998376732077	2	459.2558288574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RSVLSDQI_	REV__nc|ENSG00000054392|Q5VTY9-4|HHAT	44.116797842482775	0.6307669463330267	5				NaN	NaN	0	NaN	5307	3664	8967
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8974	27.432	NaN	1606.2	30	0	317.72	0.14	+			39762	STITVDQMK	9	55	511.7643028303411	1021.5140527274822	2	511.7629089355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STITVDQMK_	ENSG00000150593|ENST00000280154|PDCD4;nc|ENSG00000150593|Q53EL6-2|PDCD4	31.529811441608018	0.5085848003137583	5				NaN	NaN	0	NaN	5308	3664	8967
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8986	27.46	NaN	9916.2	30	0	1182.9	0.214	+			15333	GTVIVDSTVGK	11	78	538.3047938823603	1074.5950348315205	2	538.3043823242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTVIVDSTVGK_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	96.33408219706786	0.07284471942732389	5				NaN	NaN	0	NaN	5317	3667	8985
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8987	27.463	NaN	4453	30	0	635.39	0.106	+			6633	AYSVEHNQL	9	58	530.7573292236414	NaN	0	530.758056640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AYSVEHNQL_	ENSG00000117523|ENST00000647382|PRRC2C;nc|ENSG00000117523|Q9Y520-2|PRRC2C;nc|ENSG00000117523|Q9Y520-3|PRRC2C;nc|ENSG00000117523|Q9Y520-4|PRRC2C;nc|ENSG00000117523|Q9Y520-5|PRRC2C;nc|ENSG00000117523|Q9Y520-6|PRRC2C;nc|ENSG00000117523|Q9Y520|PRRC2C;PRRC2C|p.K1018Nfs*7|1|0.21|ENSG00000117523|chr1:171540521-171540521|A/-|frameshift_variant;PRRC2C|p.P2791Lfs*5|1|0.1|ENSG00000117523|chr1:171591761-171591761|C/-|frameshift_variant	69.6276240434122	0.10825701912424071	5				NaN	NaN	0	NaN	5318	3667	8985
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8988	27.465	NaN	2970.3	30	0	316.24	0.106			+	37587	SLPCAAGF	8	47	383.18270851961586	764.3508641060317	2	383.1822509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLPCAAGF_	REV__ENSG00000158125|ENST00000379416|XDH;REV__XDH|p.P555Qfs*67|1|0.27|ENSG00000158125|chr2:31373895-31373895|G/-|frameshift_variant;REV__XDH|p.Q919Rfs*10|1|0.37|ENSG00000158125|chr2:31350104-31350104|C/-|frameshift_variant;REV__XDH|p.T311Nfs*8|1|0.17|ENSG00000158125|chr2:31383107-31383108|-/T|frameshift_variant	29.841539824830324	0.7289191502596711	5				NaN	NaN	0	NaN	5319	3667	8985
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8989	27.467	NaN	3331.1	30	0	267.8	0.106	+			23404	LAALSLLRQ	9	70	492.8148843998878	983.6152158665756	2	492.81427001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LAALSLLRQ_	ENSG00000204131|ENST00000633930|NHSL2	76.7741389293348	0.11149722112137898	5				NaN	NaN	0	NaN	5320	3667	8985
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8990	27.469	NaN	3086.2	30	0	582.35	0.106			+	24628	LGSLPALLSH	10	42	336.534259626721	NaN	0	336.5345458984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LGSLPALLSH_	REV__ENST00000259241.6_1_2:129025165-129025384:-|nuORF	21.9598887501803	0.4201028297492154	5				NaN	NaN	0	NaN	5321	3667	8985
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8991	27.471	NaN	2957.5	30	0	987.22	0.106	+			17694	IELLFPKLL	9	38	362.56986967563176	1084.6877796270953	3	362.5697326660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IELLFPKLL_	ENST00000392455.7_2_3:191112649-191112850:+|nuORF	25.57405402267927	0.5642445186134241	5				NaN	NaN	0	NaN	5322	3667	8985
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	8992	27.472	NaN	2357.1	30	0	828.89	0.036	+			7453	DFLLDELVQ	9	59	546.2826372660999	1090.5507215989996	2	546.2822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DFLLDELVQ_	MTRF1L|p.Y354F|1|0.07|ENSG00000112031|chr6:152989977-152989977|T/A|missense_variant	63.30626980617807	0.18605348971131092	5				NaN	NaN	0	NaN	5323	3667	8985
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9004	27.499	NaN	21809	30	0	14483	0.214			+	-1	SICLSRAL	8	59	460.2544494108402	918.4943458884804	2	460.2532043457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SIC(Carbamidomethyl (C))LSRAL_	REV__ENST00000445076.1_1_1:93804740-93811327:-|nuORF	60.97194046774394	0.49215940876911696	5				NaN	NaN	0	NaN	5332	3670	9003
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9005	27.503	NaN	4829.1	30	0	1266.8	0.106	+			39750	STITGVMDK	9	63	476.245686069024	950.476819204848	2	476.24395751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STITGVMDK_	ENSG00000147872|ENST00000276914|PLIN2;PLIN2|p.V348*|1|0.15|ENSG00000147872|chr9:19116520-19116520|C/-|frameshift_variant	112.41091882917199	0.026537921851008135	5				NaN	NaN	0	NaN	5333	3670	9003
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9006	27.505	NaN	2638.9	30	0	1482.9	0.106				-1	SVPSSETVICR	11	51	617.8098182363799	1233.6050835395597	2	617.8080444335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SVPSSETVIC(Carbamidomethyl (C))R_	ENSG00000155090|ENST00000285407|KLF10;nc|ENSG00000155090|Q13118-2|KLF10	49.536043120802724	0.4274608637932522	5				NaN	NaN	0	NaN	5334	3670	9003
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9007	27.506	NaN	2783.4	30	0	479.95	0.106	+			16659	HIHKPKTL	8	65	487.3012854278204	972.5880179224408	2	487.29931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HIHKPKTL_	ENST00000359314.5_1_6:47501434-47512410:+|nuORF	33.51558372728122	0.7005509609380386	5				NaN	NaN	0	NaN	5335	3670	9003
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9008	27.508	NaN	2280.1	30	0	310.96	0.106	+			18487	ISGKVSVTPC	10	62	495.7675544934795	989.520556053759	2	495.7657165527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ISGKVSVTPC_	ENST00000473964.5_1_1:2429963-2431264:+|nuORF	39.252832667884924	0.5560298534376815	5				NaN	NaN	0	NaN	5336	3670	9003
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9009	27.51	NaN	1059.7	30	0	200.26	0.106	+			9792	ENVPGQSL	8	48	422.2137451171875	NaN	0	422.2137451171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ENVPGQSL_	nc|ENSG00000070182|P11277-3|SPTB	45.97224482568171	1.7418937515398478	5				NaN	NaN	0	NaN	5337	3670	9003
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9010	27.512	NaN	1333.6	30	0	202.13	0.036				-1	SCVMGWVFK	9	52	557.2643225889276	1112.514092244655	2	557.2650146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_SC(Carbamidomethyl (C))VMGWVFK_	tr|U7T3U4|U7T3U4_FUSNUNSSfamilyneurotransmitter:Na+symporterOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00263PE=4SV=1	37.15910966729921	0.4535818937225704	5				NaN	NaN	0	NaN	5338	3670	9003
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9024	27.542	NaN	5626.7	30	0	655.1	0.214	+			1797	AIFKPVMSK	9	68	510.8002982235915	1019.586043513983	2	510.7995300292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AIFKPVMSK_	ENSG00000116478|ENST00000373548|HDAC1	72.2432373244024	0.13108886737667413	5				NaN	NaN	0	NaN	5349	3673	9023
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9025	27.546	NaN	5854.9	30	0	858.68	0.106	+			43865	TMDKSELVQK	10	74	610.8149875606703	1219.6154221881404	2	610.8133544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))TMDKSELVQK_	ENSG00000166913|ENST00000353703|YWHAB	104.01359247289065	0.06577755598965461	5				NaN	NaN	0	NaN	5350	3673	9023
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9026	27.548	NaN	5207	30	0	372.43	0.106			+	24817	LIQTPFLVL	9	78	522.3278942621542	1042.6412355911084	2	522.3271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LIQTPFLVL_	REV__ENSG00000090661|ENST00000251363|CERS4;REV__ENST00000557925.1_1_19:8321089-8326990:+|nuORF	87.69643885390035	0.07135982304947239	5				NaN	NaN	0	NaN	5351	3673	9023
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9027	27.55	NaN	6872	30	0	4286.4	0.106	+			1798	AIFKPVMSK	9	39	340.8684943726041	NaN	0	340.868408203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AIFKPVMSK_	ENSG00000116478|ENST00000373548|HDAC1	47.95952297671804	0.22075498469600283	5				NaN	NaN	0	NaN	5352	3673	9023
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9028	27.551	NaN	1901.4	30	0	734.03	0.106	+			30176	PSGLHARV	8	47	418.73846751800863	NaN	0	418.7384948730469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PSGLHARV_	ZNF74|p.R631Efs*84|1|0.51|ENSG00000185252|chr22:20406918-20406918|C/-|frameshift_variant	23.04248740728303	1.7418937515398478	5				NaN	NaN	0	NaN	5353	3673	9023
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9029	27.553	NaN	2598.2	30	0	784.5	0.036	+			43055	TELIQKAKL	9	47	348.55404361417766	1042.640301442733	3	348.55340576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TELIQKAKL_	ENSG00000134308|ENST00000238081|YWHAQ	36.446750945000026	0.4619375763483977	5				NaN	NaN	0	NaN	5354	3673	9023
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9030	27.554	NaN	1185.6	30	0	364.32	0.137			+	29370	PAGPSHVI	8	38	389.2171281282643	776.4197033233286	2	389.2162780761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PAGPSHVI_	REV__ENSG00000145743|ENST00000542267|FBXL17;REV__FBXL17|p.C627*|1|0.1|ENSG00000145743|chr5:107881121-107881121|A/-|frameshift_variant	46.76643321282427	0.6143254112625767	5				NaN	NaN	0	NaN	5355	3673	9023
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9042	27.581	NaN	4777.8	30	0	593.95	0.214	+			10658	EYQKVGQSF	9	72	543.2683709360194	1084.5221889388388	2	543.2672119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EYQKVGQSF_	ENSG00000178996|ENST00000381410|SNX18;nc|ENSG00000178996|Q96RF0-3|SNX18;nc|ENSG00000178996|Q96RF0|SNX18	93.1432384553994	0.056003526918089595	5				NaN	NaN	0	NaN	5364	3676	9041
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9043	27.585	NaN	3740.7	30	0	654.74	0.106	+			20239	KELTIGSKL	9	59	494.8067590923289	987.5989652514578	2	494.80517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KELTIGSKL_	ENSG00000197956|ENST00000368719|S100A6	112.2953585152457	0.026655838328212944	5				NaN	NaN	0	NaN	5365	3676	9041
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9044	27.587	NaN	2373.9	30	0	449.88	0.106	+			6846	CIRSKVANLK	10	68	566.3362984652731	1130.658043997346	2	566.3347778320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_CIRSKVANLK_	ENSG00000176896|ENST00000696128|TCEANC;nc|ENSG00000176896|Q8N8B7-2|TCEANC	58.22992032128504	0.38193887838457763	5				NaN	NaN	0	NaN	5366	3676	9041
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9045	27.589	NaN	2584.1	30	0	217.65	0.106			+	27043	LYYLKQLP	8	60	519.3041820837736	1036.5938112343472	2	519.8043823242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LYYLKQLP_	REV__CHST13|p.D57Y|1|0.4|ENSG00000180767|chr3:126536342-126536342|G/T|missense_variant	44.53106598305862	0.628196326904373	5				NaN	NaN	0	NaN	5367	3676	9041
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9046	27.591	NaN	2092.8	30	0	775.68	0.106			+	17352	IAKHSPSSVK	10	56	527.3070600800672	1052.5995672269344	2	527.8073120117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IAKHSPSSVK_	REV__ENST00000409320.7_1_2:101622422-101622563:+|nuORF	30.317721548370564	0.6322445173429027	5				NaN	NaN	0	NaN	5368	3676	9041
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9047	27.593	NaN	1859.1	30	0	158.23	0.106	+			48770	VTYEHLITK	9	64	552.3096152941494	1102.6046776550986	2	552.3088989257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTYEHLITK_	ENSG00000136628|ENST00000366923|EPRS1	72.87924865735499	0.12833875048249987	5				NaN	NaN	0	NaN	5369	3676	9041
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9048	27.594	NaN	2475.2	30	0	336.06	0.034			+	50254	WPTAPPSSL	9	53	478.2469634460796	954.4793739589592	2	478.24578857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_WPTAPPSSL_	REV__ENST00000414620.1_1_7:5580365-5602392:-|nuORF	35.61828744233558	0.47037581924408073	5				NaN	NaN	0	NaN	5370	3676	9041
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9061	27.622	NaN	8963.8	30	0	1257.7	0.214			+	-1	CAGLPPSTI	9	66	458.23349644421114	914.4524399552223	2	458.23248291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_C(Carbamidomethyl (C))AGLPPSTI_	REV__ENST00000372684.7_1_1:41113455-41131276:-|nuORF	47.91560031466742	0.327412564698279	5				NaN	NaN	0	NaN	5380	3679	9060
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9062	27.626	NaN	7866.2	30	0	1403.1	0.106			+	12438	GEASVCALAK	10	64	474.74422200865615	947.4738910841123	2	474.7430725097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEASVCALAK_	REV__ENSG00000148840|ENST00000278070|PPRC1;REV__nc|ENSG00000148840|Q5VV67-2|PPRC1	69.6276240434122	0.2803623802747859	5				NaN	NaN	0	NaN	5381	3679	9060
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9063	27.628	NaN	4361.3	30	0	716.97	0.106			+	25374	LPGTQELGALT	11	65	550.305036043802	1098.595519154404	2	550.3049926757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LPGTQELGALT_	REV__ENSG00000100106|ENST00000644935|TRIOBP;REV__nc|ENSG00000100106|Q9H2D6-2|TRIOBP;REV__nc|ENSG00000100106|Q9H2D6-3|TRIOBP;REV__TRIOBP|p.L1770Qfs*47|1|0.09|ENSG00000100106|chr22:37741018-37741019|-/AGTGT|frameshift_variant	98.58198989935565	0.06364242648159563	5				NaN	NaN	0	NaN	5382	3679	9060
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9064	27.63	NaN	3184.3	30	0	714.02	0.106				-1	 	0	43	399.19583420935953	796.3771154855191	2	399.1951904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5383	3679	9060
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9065	27.632	NaN	3134.9	30	0	378.6	0.106	+			35561	SAVYGVQRG	9	53	468.74934932177723	935.4841457103545	2	468.74835205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SAVYGVQRG_	C5|p.W1228Gfs*21|1|0.25|ENSG00000106804|chr9:120976882-120976882|A/-|frameshift_variant;ENSG00000106804|ENST00000223642|C5	37.15910966729921	0.4535818937225704	5				NaN	NaN	0	NaN	5384	3679	9060
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9066	27.633	NaN	4611.2	30	0	629.88	0.036	+			24317	LFHPSNVEM	9	66	545.2564897648299	1088.4984265964597	2	545.256591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_LFHPSNVEM(Oxidation (M))_	ENSG00000151694|ENST00000310823|ADAM17	82.24051045832904	0.08786059719216216	5				NaN	NaN	0	NaN	5385	3679	9060
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9067	27.634	NaN	1498.4	30	0	192.17	0.142			+	6824	CHRYGHDKY	9	55	589.7631745364556	1177.5117961397111	2	589.7598266601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_CHRYGHDKY_	REV__ENSG00000241973|ENST00000255882|PI4KA;REV__PI4KA|p.E1291Kfs*2|1|0.43|ENSG00000241973|chr22:20734425-20734425|G/-|frameshift_variant;REV__PI4KA|p.H1295Pfs*13|1|0.28|ENSG00000241973|chr22:20734411-20734412|-/G|frameshift_variant;REV__PI4KA|p.H1295Tfs*36|2|0.31|ENSG00000241973|chr22:20734412-20734412|G/-|frameshift_variant	44.116797842482775	0.37197099687881774	5				NaN	NaN	0	NaN	5386	3679	9060
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9080	27.664	NaN	32193	30	0	4313	0.215			+	19760	KDYWRNAR	8	79	554.786096217453	1107.5576395017058	2	554.7857666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KDYWRNAR_	REV__CHAT|p.G417R|1|0.14|ENSG00000070748|chr10:49646642-49646642|G/A|missense_variant	68.484700416344	0.4195245774506064	5				NaN	NaN	0	NaN	5396	3682	9079
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9081	27.668	NaN	13146	30	0	4785.4	0.106				-1	 	0	69	475.76986859022145	949.5251842472429	2	475.76861572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5397	3682	9079
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9082	27.67	NaN	3543.8	30	0	345.19	0.106			+	47244	VMPMIIKM	8	69	497.7597944615888	993.5050359899776	2	497.75885009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Oxidation (M)	_VMPM(Oxidation (M))IIKM(Oxidation (M))_	REV__ENSG00000021645|ENST00000335750|NRXN3;REV__nc|ENSG00000021645|Q9Y4C0-3|NRXN3;REV__nc|ENSG00000021645|Q9Y4C0-4|NRXN3;REV__nc|ENSG00000021645|Q9Y4C0|NRXN3;REV__NRXN3|p.R369Vfs*8|1|0.3|ENSG00000021645|chr14:78803793-78803793|G/-|frameshift_variant	46.76643321282427	0.6143254112625767	5				NaN	NaN	0	NaN	5398	3682	9079
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9083	27.672	NaN	4641.9	30	0	799.56	0.106	+			6195	AVQQPFINK	9	67	522.7958225389862	NaN	0	522.7960205078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVQQPFINK_	ENSG00000186260|ENST00000571589|MRTFB;nc|ENSG00000186260|Q9ULH7-4|MRTFB;nc|ENSG00000186260|Q9ULH7|MRTFB	111.64827973302667	0.008208597185614463	5				NaN	NaN	0	NaN	5399	3682	9079
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9084	27.674	NaN	2237.6	30	0	275.61	0.106	+			33091	RELAQQVQQV	10	65	599.8320911765762	1197.6496294199524	2	599.8305053710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RELAQQVQQV_	DDX5|p.D424Ifs*31|1|0.03|ENSG00000108654|chr17:64500720-64500721|-/AAGCAATTAAT|frameshift_variant;DDX5|p.D572Nfs*6|1|0.04|ENSG00000108654|chr17:64500054-64500055|-/TGACAAGATAGTT|frameshift_variant;DDX5|p.R502Gfs*87|1|0.21|ENSG00000108654|chr17:64500264-64500264|T/-|frameshift_variant;ENSG00000100201|ENST00000403230|DDX17;ENSG00000108654|ENST00000225792|DDX5;ENST00000216019.11_1_22:38888049-38902242:-|nuORF;ENST00000432525.5_1_22:38886367-38903636:-|nuORF;ENST00000581230.5_1_17:62498125-62502378:-|nuORF;ENST00000583894.1_1_17:62499542-62500133:-|nuORF;nc|ENSG00000100201|Q92841-1|DDX17;nc|ENSG00000100201|Q92841-2|DDX17;nc|ENSG00000100201|Q92841-3|DDX17;nc|ENSG00000108654|P17844-2|DDX5	93.5975768576971	0.11047702954938905	5				NaN	NaN	0	NaN	5400	3682	9079
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9085	27.675	NaN	1564.2	30	0	193.79	0.033			+	8058	DVGDLQHL	8	45	448.7283366517997	895.4421203703994	2	448.7270812988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DVGDLQHL_	REV__ENSG00000164066|ENST00000335251|INTU;REV__ENST00000503952.5_1_4:128606686-128637588:+|nuORF;REV__nc|ENSG00000164066|Q9ULD6-4|INTU	68.484700416344	0.4195245774506064	5				NaN	NaN	0	NaN	5401	3682	9079
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9086	27.676	NaN	1988.9	30	0	191.07	0.139	+			79	AAAYPHTSL	9	56	465.7384009045907	929.4622488759815	2	465.73773193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AAAYPHTSL_	ENSG00000142599|ENST00000400908|RERE;nc|ENSG00000142599|Q9P2R6-2|RERE;RERE|p.Q899L|1|0.36|ENSG00000142599|chr1:8360811-8360811|T/A|missense_variant;RERE|p.S1084Rfs*173|1|0.21|ENSG00000142599|chr1:8360258-8360258|C/-|frameshift_variant;RERE|p.T1358Dfs*37|1|0.36|ENSG00000142599|chr1:8358464-8358465|-/G|frameshift_variant	38.80614096846853	0.43426287593479557	5				NaN	NaN	0	NaN	5402	3682	9079
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9099	27.706	NaN	17889	30	0	2917.4	0.214				-1	 	0	55	440.69652018165226	879.3784874301045	2	440.6951904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5412	3685	9098
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9100	27.71	NaN	2515.9	30	0	302.74	0.106	+			28385	NELKGQQVL	9	59	514.7919743510807	1027.5693957689614	2	514.790771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NELKGQQVL_	chr6:135201749-135202414|375|10.11|0.42|4.6|+|ENST00000616088|MYB,MYB;ENSG00000118513|ENST00000341911|MYB;nc|ENSG00000118513|P10242-10|MYB;nc|ENSG00000118513|P10242-11|MYB;nc|ENSG00000118513|P10242-12|MYB;nc|ENSG00000118513|P10242-3|MYB;nc|ENSG00000118513|P10242-5|MYB;nc|ENSG00000118513|P10242-6|MYB;nc|ENSG00000118513|P10242-8|MYB;nc|ENSG00000118513|P10242|MYB	63.53385203322761	0.18415635464017938	5				NaN	NaN	0	NaN	5413	3685	9098
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9101	27.712	NaN	4550.6	30	0	1025.3	0.106	+			10556	EYATKISRF	9	64	557.7988685731359	1113.5831842130717	2	557.7985229492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EYATKISRF_	ENSG00000057757|ENST00000246151|PITHD1;nc|ENSG00000057757|Q9GZP4-2|PITHD1	63.53385203322761	0.18415635464017938	5				NaN	NaN	0	NaN	5414	3685	9098
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9102	27.714	NaN	1686.7	30	0	282.23	0.106	+			28647	NLHLVLID	8	52	468.78028243304976	935.5460119328995	2	468.7791442871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NLHLVLID_	ENSG00000131558|ENST00000253861|EXOC4;ENST00000462055.5_1_7:132937857-133164897:+|nuORF;ENST00000486013.5_1_7:132937857-133314895:+|nuORF;EXOC4|p.N439Ifs*15|1|0.39|ENSG00000131558|chr7:133475456-133475456|A/-|frameshift_variant;EXOC4|p.N439Kfs*28|1|0.17|ENSG00000131558|chr7:133475455-133475456|-/A|frameshift_variant;nc|ENSG00000131558|Q96A65-2|EXOC4	33.51558372728122	0.7005509609380386	5				NaN	NaN	0	NaN	5415	3685	9098
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9103	27.716	NaN	2508.3	30	0	316.4	0.106	+			47654	VSCSLSRGLQ	10	63	525.2735065747661	1048.532460216332	2	525.2727661132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSCSLSRGLQ_	ENSG00000183735|ENST00000331710|TBK1;TBK1|p.I397Nfs*5|1|0.2|ENSG00000183735|chr12:64484493-64484494|-/A|frameshift_variant;TBK1|p.V275D|1|0.11|ENSG00000183735|chr12:64481853-64481853|T/A|missense_variant	39.873155843976775	0.5503138860789152	5				NaN	NaN	0	NaN	5416	3685	9098
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9104	27.718	NaN	1291.3	30	0	112.63	0.106			+	33651	RMRYQNVV	8	57	533.2838351360587	1064.5531173389172	2	533.2825927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RMRYQNVV_	REV__ENSG00000163083|ENST00000295228|INHBB	60.29395666154354	0.49887135096048313	5				NaN	NaN	0	NaN	5417	3685	9098
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9105	27.719	NaN	1498.4	30	0	226.45	0.033	+			13614	GLYLGKAK	8	46	425.2630938923129	NaN	0	425.2632141113281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GLYLGKAK_	ENST00000432223.2_1_11:73141522-73179519:-|nuORF	28.2542754592877	1.7418937515398478	5				NaN	NaN	0	NaN	5418	3685	9098
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9119	27.75	NaN	9386.1	30	0	1721.6	0.214				-1	 	0	82	601.3622162059464	1200.7098794786928	2	601.3612060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5429	3688	9118
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9120	27.753	NaN	3831.8	30	0	583.26	0.106	+			46523	VEWNKKEEL	9	72	587.8098628931796	1173.605172853159	2	587.8087158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VEWNKKEEL_	BZW1|p.S325Rfs*19|1|0.04|ENSG00000082153|chr2:200819989-200819990|-/ACAATATAGAA|frameshift_variant;ENSG00000082153|ENST00000409600|BZW1;ENSG00000136261|ENST00000258761|BZW2;nc|ENSG00000082153|Q7L1Q6-3|BZW1;nc|ENSG00000082153|Q7L1Q6-4|BZW1	80.45461616416974	0.09558281504443908	5				NaN	NaN	0	NaN	5430	3688	9118
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9121	27.755	NaN	11822	30	0	8684.4	0.106				-1	 	0	52	343.199559351322	684.3845657694441	2	343.1988220214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5431	3688	9118
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9122	27.757	NaN	6263.9	30	0	1571.3	0.106	+			16847	HPEKLATVL	9	58	504.29772627732103	NaN	0	504.2976379394531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HPEKLATVL_	ENSG00000164934|ENST00000612750|DCAF13;ENST00000521716.1_1_8:104427674-104432721:+|nuORF;nc|ENSG00000164934|Q9NV06-2|DCAF13	51.19269402634007	0.19847346126499396	5				NaN	NaN	0	NaN	5432	3688	9118
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9123	27.759	NaN	2450.3	30	0	508.64	0.106				-1	FNFFACVL	8	58	509.2453041236602	1016.4760553141205	2	509.2465515136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_FNFFAC(Carbamidomethyl (C))VL_	ENSG00000128271|ENST00000337539|ADORA2A	39.021493756699265	0.6623843612266921	5				NaN	NaN	0	NaN	5433	3688	9118
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9124	27.761	NaN	1504.9	30	0	97.295	0.034				-1	SVSMPVRK	8	55	460.2544494108402	918.4943458884804	2	461.255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_SVSM(Oxidation (M))PVRK_	nc|ENSG00000211804|A0A1B0GX56|TRDV1	35.200714571348534	0.6875396545722289	5				NaN	NaN	0	NaN	5434	3688	9118
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9125	27.761	NaN	1573	30	0	239.02	0.139			+	33284	RGLHSLLL	8	47	454.78830603634987	907.5620591394998	2	454.7873840332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RGLHSLLL_	REV__ENSG00000197891|ENST00000377574|SLC22A12;REV__nc|ENSG00000197891|Q96S37-2|SLC22A12;REV__nc|ENSG00000197891|Q96S37-3|SLC22A12;REV__nc|ENSG00000197891|Q96S37-4|SLC22A12	31.954861631926434	0.7126016770032289	5				NaN	NaN	0	NaN	5435	3688	9118
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9139	27.793	NaN	4773.5	30	0	1937.8	0.214	+			16546	HEVMEQQTL	9	59	557.764167537136	1113.513782141072	2	557.763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HEVMEQQTL_	ENSG00000104738|ENST00000649973|MCM4;MCM4|p.T629Qfs*18|2|0.31|ENSG00000104738|chr8:47971419-47971419|A/-|frameshift_variant	83.6470233535746	0.08277643980271215	5				NaN	NaN	0	NaN	5446	3691	9138
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9140	27.796	NaN	4762.4	30	0	396.33	0.106			+	15838	GWHVNAQRA	9	74	519.7655802335589	1037.5166075339177	2	519.7647094726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GWHVNAQRA_	REV__ENSG00000089916|ENST00000261530|GPATCH2L;REV__ENST00000553588.1_3_14:76647133-76662365:+|nuORF;REV__ENST00000554375.5_1_14:76644623-76668191:+|nuORF;REV__nc|ENSG00000089916|Q9NWQ4-4|GPATCH2L	55.50420428727701	0.2510918378945873	5				NaN	NaN	0	NaN	5447	3691	9138
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9141	27.798	NaN	3296.9	30	0	820.43	0.106				-1	 	0	55	458.7594035219786	915.5042541107572	2	458.75830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5448	3691	9138
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9142	27.8	NaN	3265.4	30	0	380.83	0.106				-1	 	0	71	524.2493427052533	1046.4841324773065	2	524.2486572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5449	3691	9138
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9143	27.802	NaN	2916.9	30	0	1561	0.106			+	24738	LHRLHTAPL	9	58	529.3167900201242	1056.6190271070484	2	529.3168334960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LHRLHTAPL_	REV__ENSG00000132781|ENST00000456914|MUTYH;REV__ENST00000467459.5_1_1:45794980-45797699:-|nuORF;REV__ENST00000482094.5_1_1:45794980-45797552:-|nuORF;REV__nc|ENSG00000132781|Q9UIF7-2|MUTYH;REV__nc|ENSG00000132781|Q9UIF7-3|MUTYH;REV__nc|ENSG00000132781|Q9UIF7-4|MUTYH;REV__nc|ENSG00000132781|Q9UIF7-5|MUTYH;REV__nc|ENSG00000132781|Q9UIF7|MUTYH	26.69291269510374	0.5537881896960711	5				NaN	NaN	0	NaN	5450	3691	9138
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9144	27.804	NaN	2158	30	0	141.85	0.036				-1	ATNAACASLLK	11	60	560.2953530770413	1118.5761532208826	2	560.2948608398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_ATNAAC(Carbamidomethyl (C))ASLLK_	ENSG00000134996|ENST00000346234|OSTF1;OSTF1|p.K191Rfs*11|1|0.32|ENSG00000134996|chr9:75140914-75140914|A/-|frameshift_variant	43.41853373365257	0.5111670701941979	5				NaN	NaN	0	NaN	5451	3691	9138
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9145	27.804	NaN	1488.9	30	0	116.41	0.142			+	46196	VDWYYQMK	8	69	574.7554288672443	1147.4963048012885	2	574.755615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_VDWYYQM(Oxidation (M))K_	REV__ENSG00000142733|ENST00000357582|MAP3K6;REV__nc|ENSG00000142733|O95382-2|MAP3K6;REV__nc|ENSG00000142733|O95382-3|MAP3K6	55.50420428727701	0.5462892107279674	5				NaN	NaN	0	NaN	5452	3691	9138
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9156	27.832	NaN	7289.8	30	0	1490.1	0.214			+	-1	QEMMEKLM	8	70	544.2266237752965	1086.438694617393	2	544.2257690429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	3 Oxidation (M)	_QEM(Oxidation (M))M(Oxidation (M))EKLM(Oxidation (M))_	REV__ENSG00000187790|ENST00000267430|FANCM;REV__nc|ENSG00000187790|Q8IYD8-3|FANCM	55.50420428727701	0.5462892107279674	5				NaN	NaN	0	NaN	5460	3694	9155
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9157	27.836	NaN	7011.5	30	0	1382.3	0.106			+	50297	WSKFHEIVV	9	73	572.8117616205728	1143.6089703079456	2	572.8110961914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WSKFHEIVV_	REV__ENSG00000187790|ENST00000267430|FANCM;REV__FANCM|p.E869Rfs*3|1|0.21|ENSG00000187790|chr14:45175352-45175353|-/A|frameshift_variant;REV__nc|ENSG00000187790|Q8IYD8-2|FANCM;REV__nc|ENSG00000187790|Q8IYD8-3|FANCM	71.29570347882199	0.13518600952103718	5				NaN	NaN	0	NaN	5461	3694	9155
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9158	27.838	NaN	2774.1	30	0	208.08	0.106	+			36139	SEKRRRAK	8	66	515.8170213712814	1029.6194898093627	2	515.8158569335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEKRRRAK_	ENSG00000136830|ENST00000373312|NIBAN2;nc|ENSG00000136830|Q96TA1-2|NIBAN2	51.33545320467046	0.5859736979383976	5				NaN	NaN	0	NaN	5462	3694	9155
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9159	27.839	NaN	2165.1	30	0	358.21	0.106				-1	ASTKKVVMK	9	34	336.534259626721	NaN	0	336.5341796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_ASTKKVVM(Oxidation (M))K_	CFAP47|p.F1567Vfs*4|1|0.31|ENSG00000165164|chrX:36098829-36098830|-/G|frameshift_variant;CFAP47|p.H2345Afs*15|1|0.09|ENSG00000165164|chrX:36236809-36236810|-/A|frameshift_variant;CFAP47|p.K734Nfs*6|1|0.13|ENSG00000165164|chrX:35971909-35971909|A/-|frameshift_variant;CFAP47|p.P2326Tfs*34|1|0.26|ENSG00000165164|chrX:36236751-36236752|-/A|frameshift_variant;ENSG00000165164|ENST00000378653|CFAP47;nc|ENSG00000165164|Q6ZTR5-1|CFAP47;nc|ENSG00000165164|Q6ZTR5-2|CFAP47;nc|ENSG00000165164|Q6ZTR5-6|CFAP47	23.52269567125451	0.3573684076213556	5				NaN	NaN	0	NaN	5463	3694	9155
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9160	27.841	NaN	4899.4	30	0	865.09	0.106				-1	 	0	61	465.24635415027257	928.4781553673452	2	465.73785400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5464	3694	9155
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9161	27.843	NaN	1250	30	0	80.191	0.106			+	11879	FTKKLMEK	8	47	512.7955393672321	1023.5765258012642	2	512.7946166992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FTKKLMEK_	REV__ENSG00000127603|ENST00000564288|MACF1;REV__MACF1|p.A5223Lfs*8|1|0.21|ENSG00000127603|chr1:39388486-39388486|G/-|frameshift_variant;REV__MACF1|p.N4824Kfs*19|1|0.33|ENSG00000127603|chr1:39387292-39387293|-/A|frameshift_variant;REV__MACF1|p.T4896Lfs*29|1|0.27|ENSG00000127603|chr1:39387507-39387507|A/-|frameshift_variant;REV__nc|ENSG00000127603|Q9UPN3-5|MACF1;REV__nc|ENSG00000127603|Q9UPN3|MACF1	64.20726635412375	0.4601301477144759	5				NaN	NaN	0	NaN	5465	3694	9155
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9162	27.845	NaN	3559	30	0	401.54	0.033				-1	 	0	58	443.7724827397605	885.530412546321	2	443.772216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5466	3694	9155
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9173	27.869	NaN	8676.5	30	0	1026.6	0.214				-1	 	0	63	443.7724827397605	885.530412546321	2	443.7712707519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5474	3697	9172
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9174	27.872	NaN	4670.3	30	0	629.68	0.106	+			2267	ALVTITPFL	9	62	487.79893133320684	973.5833097332137	2	487.7973327636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ALVTITPFL_	nc|ENSG00000203581|Q96R84|OR1F2P	57.81127852772723	0.2318599694398087	5				NaN	NaN	0	NaN	5475	3697	9172
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9175	27.874	NaN	2626.9	30	0	311.54	0.106			+	1124	AELQCETLA	9	55	517.743989738119	1033.473426543038	2	517.7434692382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_AELQC(Carbamidomethyl (C))ETLA_	REV__ENSG00000020577|ENST00000554335|SAMD4A;REV__nc|ENSG00000020577|Q9UPU9-2|SAMD4A;REV__nc|ENSG00000020577|Q9UPU9-3|SAMD4A	54.776311868738084	0.25715957988447635	5				NaN	NaN	0	NaN	5476	3697	9172
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9176	27.876	NaN	6176.8	30	0	1514	0.106			+	185	AALCWGVAAPR	11	60	557.7936045872038	1113.5726562412076	2	558.798583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AALCWGVAAPR_	REV__ENST00000529055.5_1_11:224232-236273:-|nuORF	35.61828744233558	0.616184410043185	5				NaN	NaN	0	NaN	5477	3697	9172
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9177	27.878	NaN	3716.2	30	0	600.6	0.106				-1	GCESMDECK	9	61	537.6816825549644	1073.3488121767286	2	537.6810913085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C),Oxidation (M)	_GC(Carbamidomethyl (C))ESM(Oxidation (M))DECK_	ENSG00000105750|ENST00000328178|ZNF85;nc|ENSG00000105750|Q03923-2|ZNF85;ZNF85|p.C347Mfs*6|1|0.33|ENSG00000105750|chr19:20949546-20949547|-/A|frameshift_variant	20.94693142431847	0.6074874384046576	5				NaN	NaN	0	NaN	5478	3697	9172
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9178	27.88	NaN	1814.7	30	0	259.94	0.106	+			51597	YYQDTPKQI	9	60	578.2888223371164	1154.5630917410326	2	578.2877197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YYQDTPKQI_	ENSG00000048162|ENST00000614830|NOP16	95.81516180277367	0.04847050768394289	5				NaN	NaN	0	NaN	5479	3697	9172
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9179	27.881	NaN	2158.7	30	0	462.92	0.035			+	23773	LCKHRVAPG	9	58	490.7744089062993	NaN	0	490.7742614746094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LCKHRVAPG_	REV__ENSG00000153827|ENST00000675903|TRIP12;REV__nc|ENSG00000153827|Q14669-2|TRIP12;REV__nc|ENSG00000153827|Q14669-3|TRIP12;REV__nc|ENSG00000153827|Q14669-4|TRIP12;REV__nc|ENSG00000153827|Q14669|TRIP12;REV__TRIP12|p.H1434Afs*2|1|0.16|ENSG00000153827|chr2:229791143-229791144|-/T|frameshift_variant;REV__TRIP12|p.N880Kfs*36|1|0.21|ENSG00000153827|chr2:229804013-229804014|-/T|frameshift_variant;REV__TRIP12|p.S1195Lfs*24|6|0.27|ENSG00000153827|chr2:229796599-229796599|A/-|frameshift_variant;REV__TRIP12|p.Y1552Lfs*6|1|0.12|ENSG00000153827|chr2:229787620-229787621|-/A|frameshift_variant	47.91560031466742	0.22105767942158736	5				NaN	NaN	0	NaN	5480	3697	9172
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9196	27.917	NaN	8309.4	30	0	1944.3	0.214	+			39469	STFDTQITK	9	65	520.7675512349969	1039.5205495367936	2	520.7667236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STFDTQITK_	ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC;PRKDC|p.D2437Wfs*3|1|0.11|ENSG00000253729|chr8:47840161-47840162|-/CA|frameshift_variant;PRKDC|p.K3681Nfs*6|1|0.32|ENSG00000253729|chr8:47785174-47785177|TTCT/-|frameshift_variant;PRKDC|p.M3670*|1|0.5|ENSG00000253729|chr8:47785212-47785212|T/-|frameshift_variant;PRKDC|p.M3846Cfs*12|1|0.13|ENSG00000253729|chr8:47779047-47779047|T/-|frameshift_variant;PRKDC|p.M4020Cfs*2|1|0.31|ENSG00000253729|chr8:47776968-47776968|T/-|frameshift_variant;PRKDC|p.N3605Kfs*3|1|0.22|ENSG00000253729|chr8:47788993-47788994|-/T|frameshift_variant;PRKDC|p.N4037Ifs*15|1|0.17|ENSG00000253729|chr8:47776916-47776916|T/-|frameshift_variant;PRKDC|p.R2704Gfs*13|2|0.34|ENSG00000253729|chr8:47834238-47834238|T/-|frameshift_variant;PRKDC|p.S3402Ifs*16|1|0.04|ENSG00000253729|chr8:47799302-47799303|-/AAACCGTGAGTTAGAGGAGGTAA|frameshift_variant;PRKDC|p.S4099Qfs*6|1|0.25|ENSG00000253729|chr8:47774265-47774265|A/-|frameshift_variant;PRKDC|p.T3268Pfs*7|1|0.5|ENSG00000253729|chr8:47803426-47803426|T/-|frameshift_variant;PRKDC|p.W3401Cfs*4|1|0.01|ENSG00000253729|chr8:47799304-47799305|-/AATGAATA|frameshift_variant	177.3047273071476	0.0015666121956477066	5				NaN	NaN	0	NaN	5494	3700	9195
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9197	27.92	NaN	6765.6	30	0	3590.2	0.106	+			17933	IGLLSGTIAS	10	55	466.27737967024194	930.5402064072839	2	466.2763366699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IGLLSGTIAS_	ENSG00000183032|ENST00000331299|SLC25A21;nc|ENSG00000183032|Q9BQT8-2|SLC25A21	51.33545320467046	0.4446945571623749	5				NaN	NaN	0	NaN	5495	3700	9195
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9198	27.922	NaN	1833.9	30	0	441.68	0.106	+			18771	ITQAVLGAHY	10	40	358.1981788989914	1071.5727072971742	3	358.1975402832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ITQAVLGAHY_	EML2|p.D294Y|1|0.19|ENSG00000125746|chr19:45621599-45621599|C/A|missense_variant	20.94693142431847	0.7087701759873708	5				NaN	NaN	0	NaN	5496	3700	9195
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9199	27.924	NaN	1050.7	30	0	63.499	0.106	+			33631	RLTVGPVT	8	49	421.7590535424041	841.5035541516082	2	421.758056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RLTVGPVT_	ENSG00000129925|ENST00000431232|PGAP6	33.51558372728122	0.7005509609380386	5				NaN	NaN	0	NaN	5497	3700	9195
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9200	27.926	NaN	1973.4	30	0	233.03	0.106				-1	 	0	53	493.7805819179009	985.5466109026019	2	493.7793273925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5498	3700	9195
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9201	27.928	NaN	2711.7	30	0	446.44	0.034	+			46167	VDVEQHTL	8	57	470.74087033417806	939.4671877351561	2	470.7390441894531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VDVEQHTL_	ENSG00000134057|ENST00000256442|CCNB1;ENSG00000157456|ENST00000288207|CCNB2;nc|ENSG00000134057|P14635-2|CCNB1	101.25262130126117	0.2499877059228457	5				NaN	NaN	0	NaN	5499	3700	9195
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9202	27.928	NaN	1470.8	30	0	305.19	0.138	+			50166	WLAVVALGA	9	45	450.2698409052386	898.5251288772772	2	450.77020263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_WLAVVALGA_	ENSG00000168758|ENST00000305476|SEMA4C;ENST00000467747.1_1_2:97526365-97527817:-|nuORF;ENST00000474420.1_1_2:97526365-97527817:-|nuORF	29.841539824830324	0.5243625958137083	5				NaN	NaN	0	NaN	5500	3700	9195
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9215	27.958	NaN	34453	30	0	8761.2	0.214	+			22657	KTYGEIFEK	9	85	557.7936045872038	1113.5726562412076	2	557.7925415039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTYGEIFEK_	ENSG00000151366|ENST00000281031|NDUFC2;nc|ENSG00000151366|O95298-2|NDUFC2	154.0112374973812	0.005934173778894772	5				NaN	NaN	0	NaN	5510	3703	9214
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9216	27.961	NaN	14097	30	0	2528.5	0.106	+			46129	VDLGPPLMEK	10	57	372.19825819328616	1113.5729451800585	3	372.19732666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_VDLGPPLM(Oxidation (M))EK_	ENSG00000120549|ENST00000376454|KIAA1217;KIAA1217|p.G1042Efs*92|1|0.09|ENSG00000120549|chr10:24531867-24531867|G/-|frameshift_variant;KIAA1217|p.N1661Tfs*23|1|0.07|ENSG00000120549|chr10:24544247-24544247|A/-|frameshift_variant;KIAA1217|p.Q1199Kfs*12|1|0.25|ENSG00000120549|chr10:24542749-24542749|C/-|frameshift_variant;KIAA1217|p.R976Gfs*16|1|0.31|ENSG00000120549|chr10:24527958-24527958|A/-|frameshift_variant;KIAA1217|p.R976Kfs*8|1|0.4|ENSG00000120549|chr10:24527957-24527958|-/A|frameshift_variant;KIAA1217|p.Y714Ifs*4|1|0.27|ENSG00000120549|chr10:24513391-24513392|-/A|frameshift_variant;nc|ENSG00000120549|Q5T5P2-10|KIAA1217;nc|ENSG00000120549|Q5T5P2-2|KIAA1217;nc|ENSG00000120549|Q5T5P2-3|KIAA1217;nc|ENSG00000120549|Q5T5P2-4|KIAA1217;nc|ENSG00000120549|Q5T5P2-6|KIAA1217;nc|ENSG00000120549|Q5T5P2-7|KIAA1217;nc|ENSG00000120549|Q5T5P2-8|KIAA1217;nc|ENSG00000120549|Q5T5P2-9|KIAA1217	59.93077597824379	0.36646980200755325	5				NaN	NaN	0	NaN	5511	3703	9214
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9217	27.963	NaN	5666.6	30	0	646.71	0.106	+			29265	NYGAYINDF	9	73	538.7370177087346	1075.459482484269	2	538.7361450195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NYGAYINDF_	ENSG00000170266|ENST00000307363|GLB1;nc|ENSG00000170266|P16278-2|GLB1;nc|ENSG00000170266|P16278-3|GLB1;nc|ENSG00000170266|P16278|GLB1	34.172542307311794	0.4838870758800184	5				NaN	NaN	0	NaN	5512	3703	9214
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9218	27.965	NaN	3200.6	30	0	187.87	0.106			+	27380	MKKAEKLDT	9	66	532.2938680751889	1062.5731832171778	2	532.29296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MKKAEKLDT_	REV__chr20:6079577-6085066|126|10.71|0.12|6.5|-|2|FERMT1,FERMT1|1	93.1432384553994	0.056003526918089595	5				NaN	NaN	0	NaN	5513	3703	9214
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9219	27.967	NaN	1054.8	30	0	80.359	0.106	+			9938	EQWPEPPHAQH	11	50	678.3091659145664	1354.6037788959327	2	678.3076782226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EQWPEPPHAQH_	ENST00000471408.5_1_12:6649651-6659338:-|nuORF	22.579656572578934	0.7529490144093228	5				NaN	NaN	0	NaN	5514	3703	9214
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9220	27.969	NaN	1744.8	30	0	226.02	0.106			+	10575	EYIPFAVAL	9	58	511.7794468909148	NaN	0	511.7793273925781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EYIPFAVAL_	REV__tr|U7SM42|U7SM42_FUSNUSSSfamilysolute:Na+symporterOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02073PE=3SV=1	35.200714571348534	0.2998460331538257	5				NaN	NaN	0	NaN	5515	3703	9214
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9221	27.971	NaN	2151.8	30	0	330.57	0.038				-1	MMTIRTESSF	10	62	617.7770690665925	1233.539585199985	2	617.77587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Oxidation (M)	_M(Oxidation (M))M(Oxidation (M))TIRTESSF_	ENSG00000205186|ENST00000379071|FABP9	31.529811441608018	0.6223461015008678	5				NaN	NaN	0	NaN	5516	3703	9214
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9233	27.997	NaN	5602.9	30	0	780.42	0.214	+			1276	AESGVERQVL	10	67	544.2919126891262	1086.5692724450523	2	544.2911376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AESGVERQVL_	ENSG00000142507|ENST00000270586|PSMB6;ENST00000575643.1_1_17:4701246-4701714:+|nuORF	56.632244143249146	0.3964695498866976	5				NaN	NaN	0	NaN	5525	3706	9232
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9234	28	NaN	2983.8	30	0	395.97	0.106	+			47856	VSLFCLVP	8	58	439.24478819377487	876.4750234543498	2	439.24371337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSLFCLVP_	ENST00000259371.6_1_9:124546428-124546671:+|nuORF	69.09296820870183	0.4144562040832486	5				NaN	NaN	0	NaN	5526	3706	9232
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9235	28.002	NaN	3687.7	30	0	861.57	0.106	+			4168	ATFGTQVVEK	10	63	540.2910636762252	1078.5675744192504	2	540.2897338867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATFGTQVVEK_	C3|p.A1045Pfs*26|1|0.09|ENSG00000125730|chr19:6694452-6694452|C/-|frameshift_variant;C3|p.S1008Rfs*8|3|0.41|ENSG00000125730|chr19:6694564-6694564|G/-|frameshift_variant;ENSG00000125730|ENST00000245907|C3	55.08391021199286	0.41055145962533396	5				NaN	NaN	0	NaN	5527	3706	9232
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9236	28.004	NaN	3208.3	30	0	239.54	0.106	+			40536	SVAALPVCK	9	59	472.7641420470621	943.5137311609242	2	472.7623596191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_SVAALPVC(Carbamidomethyl (C))K_	ENSG00000007255|ENST00000585934|TRAPPC6A;nc|ENSG00000007255|O75865-2|TRAPPC6A	68.78682469695295	0.14603441672067394	5				NaN	NaN	0	NaN	5528	3706	9232
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9237	28.006	NaN	4851.5	30	0	817.71	0.106				-1	LRLPGASPGV	10	67	504.79600967410556	1007.5774664150111	2	504.7952575683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LRLPGASPGV_	ENST00000158762.7_1_17:7250477-7251285:+|nuORF	31.529811441608018	0.6223461015008678	5				NaN	NaN	0	NaN	5529	3706	9232
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9238	28.008	NaN	3319.4	30	0	284.32	0.106			+	31504	QLEQTFNWL	9	69	589.7980263450179	1177.5814997568357	2	589.8053588867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QLEQTFNWL_	REV__CFAP54|p.Q2612Rfs*5|1|0.32|ENSG00000188596|chr12:96753887-96753887|T/-|frameshift_variant;REV__ENSG00000188596|ENST00000524981|CFAP54;REV__ENST00000342887.1_1_12:97043703-97159031:+|nuORF;REV__nc|ENSG00000188596|Q96N23-2|CFAP54	93.5975768576971	0.05472259948179787	5				NaN	NaN	0	NaN	5530	3706	9232
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9239	28.01	NaN	2003	30	0	447.25	0.034	+			3234	ASLATTLTK	9	51	453.2681416239341	NaN	0	453.26837158203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASLATTLTK_	ENSG00000129083|ENST00000439561|COPB1;ENST00000526191.1_1_11:14496007-14497407:-|nuORF	72.87924865735499	0.09578366712754152	5				NaN	NaN	0	NaN	5531	3706	9232
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9252	28.037	NaN	3806.8	30	0	1662.3	0.213	+			34514	RVFVVGVGMTK	11	67	604.8458471696972	1207.6771414061943	2	604.8441772460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_RVFVVGVGM(Oxidation (M))TK_	ENSG00000116171|ENST00000371514|SCP2;ENST00000528311.5_1_1:53392996-53413692:+|nuORF;nc|ENSG00000116171|P22307-3|SCP2;nc|ENSG00000116171|P22307-7|SCP2;nc|ENSG00000116171|P22307-8|SCP2	59.93077597824379	0.32407304095777845	5				NaN	NaN	0	NaN	5541	3709	9251
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9253	28.041	NaN	3676.7	30	0	376.4	0.106	+			11020	FEKIHQETF	9	70	589.7980263450179	1177.5814997568357	2	589.7984619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FEKIHQETF_	ENSG00000189091|ENST00000302516|SF3B3;nc|ENSG00000189091|Q15393-2|SF3B3	55.721020083383095	0.24928445224720705	5				NaN	NaN	0	NaN	5542	3709	9251
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9254	28.043	NaN	4034.2	30	0	357.07	0.106	+			21593	KPITTGGVTY	10	67	518.7888116877006	1035.563070442201	2	518.7871704101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KPITTGGVTY_	ENSG00000115641|ENST00000530340|FHL2	45.97224482568171	0.49411383603842696	5				NaN	NaN	0	NaN	5543	3709	9251
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9255	28.045	NaN	3449.6	30	0	269.95	0.106	+			2210	ALQEIYNQK	9	73	553.7969713947059	1105.5793898562117	2	553.7963256835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ALQEIYNQK_	ENSG00000160216|ENST00000291572|AGPAT3;ENST00000484865.1_1_21:45391291-45401085:+|nuORF;nc|ENSG00000160216|Q9NRZ7-2|AGPAT3;nc|ENSG00000160216|Q9NRZ7-3|AGPAT3	98.62937762414208	0.04060045538121712	5				NaN	NaN	0	NaN	5544	3709	9251
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9256	28.046	NaN	1891.2	30	0	221.15	0.106	+			35656	SCWPQSAL	8	57	446.2061926189061	890.3978323046122	2	446.204833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SCWPQSAL_	ENST00000479519.5_1_3:13393312-13395748:-|nuORF	47.91560031466742	0.6071945918984287	5				NaN	NaN	0	NaN	5545	3709	9251
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9257	28.048	NaN	1943.5	30	0	192.38	0.035			+	-1	KLARLMAVP	9	63	507.80977457574346	NaN	0	507.8098449707031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_KLARLM(Oxidation (M))AVP_	REV__ENST00000313349.3_1_2:64861753-64861930:-|nuORF	38.80614096846853	0.28164298475537564	5				NaN	NaN	0	NaN	5546	3709	9251
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9270	28.076	NaN	7822.8	30	0	999.93	0.214			+	51409	YTQGALSHQM	10	71	576.2605826461547	1150.5066123591093	2	576.2601928710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_YTQGALSHQM(Oxidation (M))_	REV__ENSG00000181404|ENST00000696149|WASHC1;REV__ENST00000400706.3_1_12:78799-87272:+|nuORF;REV__ENST00000557932.5_1_15:102506277-102513446:+|nuORF;REV__ENST00000558686.5_1_15:102506217-102512799:+|nuORF;REV__ENST00000559163.6_1_15:102506277-102512065:+|nuORF;REV__ENST00000559884.5_1_15:102506277-102506794:+|nuORF;REV__nc|ENSG00000185596|C4AMC7|WASH3P;REV__nc|ENSG00000291134|Q6VEQ5|WASH2P	62.107414245175825	0.3466735403679669	5				NaN	NaN	0	NaN	5556	3712	9269
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9271	28.079	NaN	4812.5	30	0	691.11	0.106			+	50125	WHVENSSSI	9	64	529.748416153744	1057.4822793742878	2	529.748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WHVENSSSI_	REV__ENSG00000141449|ENST00000424526|GREB1L;REV__ENST00000578955.1_1_18:19057140-19088617:+|nuORF;REV__GREB1L|p.G1039Qfs*16|1|0.06|ENSG00000141449|chr18:21495754-21495755|GG/-|frameshift_variant;REV__GREB1L|p.R837H|1|0.35|ENSG00000141449|chr18:21477310-21477310|G/A|missense_variant;REV__GREB1L|p.T1038Kfs*19|1|0.06|ENSG00000141449|chr18:21495751-21495752|-/AACT|frameshift_variant;REV__nc|ENSG00000141449|Q9C091-3|GREB1L	79.71258880314673	0.09879134589249085	5				NaN	NaN	0	NaN	5557	3712	9269
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9272	28.081	NaN	3318.8	30	0	402.07	0.106	+			6587	AYLKGYVY	8	67	488.76127622997245	975.5079995267449	2	488.75994873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AYLKGYVY_	ENSG00000161594|ENST00000293303|KLHL10	44.53106598305862	0.628196326904373	5				NaN	NaN	0	NaN	5558	3712	9269
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9273	28.083	NaN	5288.7	30	0	580.95	0.106	+			34515	RVFVVGVGMTK	11	53	403.5655032582067	NaN	0	403.5653076171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_RVFVVGVGM(Oxidation (M))TK_	ENSG00000116171|ENST00000371514|SCP2;ENST00000528311.5_1_1:53392996-53413692:+|nuORF;nc|ENSG00000116171|P22307-3|SCP2;nc|ENSG00000116171|P22307-7|SCP2;nc|ENSG00000116171|P22307-8|SCP2	48.18798116849167	0.3283333270526623	5				NaN	NaN	0	NaN	5559	3712	9269
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9274	28.085	NaN	1140.8	30	0	131.19	0.106				-1	 	0	48	440.69652018165226	879.3784874301045	2	440.69549560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5560	3712	9269
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9275	28.087	NaN	2095.1	30	0	354.69	0.033				-1	 	0	47	444.251784494457	886.489016055714	2	444.25067138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5561	3712	9269
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9276	28.087	NaN	1401.8	30	0	115.29	0.14			+	9681	ELVQGPLFL	9	56	508.293701171875	NaN	0	508.293701171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ELVQGPLFL_	REV__ENST00000284006.10_1_19:34303676-34303850:+|nuORF	51.19269402634007	0.19847346126499396	5				NaN	NaN	0	NaN	5562	3712	9269
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9285	28.109	NaN	8297.6	30	0	938.56	0.214			+	27398	MKRAIMGLF	9	75	533.7994015318679	1065.5842501305358	2	533.7984619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MKRAIMGLF_	REV__CALML3|p.M73I|1|0.41|ENSG00000178363|chr10:5525304-5525304|G/T|missense_variant	65.80317337860623	0.1652391959156183	5				NaN	NaN	0	NaN	5568	3715	9284
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9286	28.113	NaN	3611.4	30	0	318.81	0.106	+			3618	ASVSTVLTSK	10	58	496.7855640802414	991.5565752272828	2	496.78448486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASVSTVLTSK_	ENSG00000188536|ENST00000251595|HBA2;ENSG00000206172|ENST00000320868|HBA1	106.88024417677582	0.05726438866303799	5				NaN	NaN	0	NaN	5569	3715	9284
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9287	28.115	NaN	2024.5	30	0	475.1	0.106				-1	 	0	45	343.199559351322	684.3845657694441	2	343.19866943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5570	3715	9284
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9288	28.116	NaN	4277.8	30	0	1529.4	0.106				-1	CVICCPMEL	9	50	591.244837418797	1180.475121904394	2	591.2437133789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	3 Carbamidomethyl (C)	_C(Carbamidomethyl (C))VIC(Carbamidomethyl (C))C(Carbamidomethyl (C))PMEL_	ENSG00000197119|ENST00000359232|SLC25A29;nc|ENSG00000197119|Q8N8R3-3|SLC25A29	24.20275056022122	0.577060078256802	5				NaN	NaN	0	NaN	5571	3715	9284
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9289	28.118	NaN	1870.4	30	0	397.22	0.106			+	10267	ETLPRHSSGP	10	62	540.7741088867188	NaN	0	540.7741088867188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ETLPRHSSGP_	REV__ENSG00000138660|ENST00000274000|AP1AR;REV__ENST00000510527.5_1_4:113153247-113186224:+|nuORF;REV__nc|ENSG00000138660|Q63HQ0-2|AP1AR	39.252832667884924	0.37128895876774715	5				NaN	NaN	0	NaN	5572	3715	9284
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9290	28.12	NaN	1086.1	30	0	78.201	0.106			+	8995	EFSTIAENKQ	10	56	583.7870802318085	NaN	0	583.7847290039062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EFSTIAENKQ_	REV__ENSG00000176783|ENST00000319449|RUFY1;REV__ENST00000393448.6_1_5:179018652-179028988:+|nuORF;REV__nc|ENSG00000176783|Q96T51-2|RUFY1	48.601550744091256	0.31444367966696773	5				NaN	NaN	0	NaN	5573	3715	9284
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9291	28.122	NaN	1359.4	30	0	97.555	0.033	+			952	AEIVTKTI	8	49	437.76709501188867	873.5196370905774	2	437.7655029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AEIVTKTI_	ENSG00000144028|ENST00000323853|SNRNP200;ENST00000497539.5_1_2:96940752-96950410:-|nuORF	79.71258880314673	0.32596852995588826	5				NaN	NaN	0	NaN	5574	3715	9284
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9306	28.153	NaN	12531	30	0	3112.2	0.215				-1	 	0	78	524.2493427052533	1046.4841324773065	2	524.2486572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5586	3718	9305
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9307	28.156	NaN	13130	30	0	7007.8	0.106				-1	 	0	62	492.2626396672151	982.5107264012303	2	492.26129150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5587	3718	9305
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9308	28.158	NaN	3336.3	30	0	362.2	0.106	+			36055	SEISSATKL	9	59	468.2566065422556	934.4986601513112	2	468.2554626464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEISSATKL_	ATRX|p.I1049*|1|0.07|ENSG00000085224|chrX:77682111-77682111|T/-|frameshift_variant;ATRX|p.I1049Nfs*4|1|0.15|ENSG00000085224|chrX:77682110-77682111|-/T|frameshift_variant;ATRX|p.K993Rfs*10|1|0.26|ENSG00000085224|chrX:77682278-77682278|T/-|frameshift_variant;ATRX|p.N1318Ifs*28|1|0.39|ENSG00000085224|chrX:77663549-77663549|T/-|frameshift_variant;ATRX|p.Q1385Sfs*6|1|0.26|ENSG00000085224|chrX:77656621-77656622|-/A|frameshift_variant;ATRX|p.R840Kfs*9|1|0.36|ENSG00000085224|chrX:77682737-77682738|-/T|frameshift_variant;ENSG00000085224|ENST00000373344|ATRX;nc|ENSG00000085224|P46100-2|ATRX;nc|ENSG00000085224|P46100-3|ATRX;nc|ENSG00000085224|P46100-4|ATRX;nc|ENSG00000085224|P46100-5|ATRX;nc|ENSG00000085224|P46100-6|ATRX	82.7504851949679	0.08565546331141553	5				NaN	NaN	0	NaN	5588	3718	9305
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9309	28.16	NaN	2367.6	30	0	392.3	0.106			+	47747	VSGLVAAAGGL	11	55	457.76985432385976	913.5251557145195	2	457.7688293457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSGLVAAAGGL_	REV__ENSG00000175414|ENST00000310389|ARL10	47.657333605630114	0.4531673460382624	5				NaN	NaN	0	NaN	5589	3718	9305
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9310	28.162	NaN	3617.9	30	0	958.11	0.106				-1	GHATPVSSLM	10	60	508.24686810827336	1014.4791832833467	2	508.2457275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_GHATPVSSLM(Oxidation (M))_	ENSG00000163811|ENST00000407426|WDR43	42.396135135203025	0.5270658956260207	5				NaN	NaN	0	NaN	5590	3718	9305
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9311	28.164	NaN	3778.5	30	0	858.03	0.037			+	11199	FHKWEGLLP	9	63	563.8046383272231	1125.594723721246	2	563.8040771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FHKWEGLLP_	REV__ENSG00000099910|ENST00000328879|KLHL22;REV__nc|ENSG00000099910|Q53GT1-3|KLHL22	44.116797842482775	0.37197099687881774	5				NaN	NaN	0	NaN	5591	3718	9305
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9312	28.164	NaN	2564	30	0	301.44	0.14			+	25040	LLHSPIAPGG	10	57	481.2769076394039	960.5392623456078	2	481.27618408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LLHSPIAPGG_	REV__ENSG00000131149|ENST00000253458|GSE1;REV__GSE1|p.P1093Qfs*45|1|0.45|ENSG00000131149|chr16:85668282-85668282|C/-|frameshift_variant;REV__nc|ENSG00000131149|Q14687-2|GSE1;REV__nc|ENSG00000131149|Q14687-3|GSE1	60.97194046774394	0.3570005369683776	5				NaN	NaN	0	NaN	5592	3718	9305
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9330	28.203	NaN	21834	30	0	1214.4	0.212	+			32948	RECERVFDKI	10	89	647.8315443562788	1293.6485357793574	2	647.8300170898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RECERVFDKI_	ENSG00000118156|ENST00000391901|ZNF541;nc|ENSG00000118156|Q9H0D2-2|ZNF541	98.62937762414208	0.0817671936103422	5				NaN	NaN	0	NaN	5607	3721	9329
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9331	28.207	NaN	25041	30	0	7201.7	0.106				-1	 	0	70	374.1970942004712	1119.5694532016137	3	374.1962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5608	3721	9329
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9332	28.209	NaN	2289.7	30	0	357.58	0.106	+			43346	TGATLYLLR	9	43	336.5348840763115	1006.5828228291346	3	336.533935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TGATLYLLR_	ENSG00000189043|ENST00000339600|NDUFA4;ENST00000486007.1_1_7:10977674-10979684:-|nuORF;NDUFA4|p.A37T|1|0.4|ENSG00000189043|chr7:10938830-10938830|C/T|missense_variant	24.20275056022122	0.577060078256802	5				NaN	NaN	0	NaN	5609	3721	9329
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9333	28.211	NaN	1829.2	30	0	405.33	0.106				-1	IMDDAINILQ	10	55	581.2932896706177	NaN	0	581.2933349609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_IM(Oxidation (M))DDAINILQ_	ENSG00000149262|ENST00000534064|INTS4;nc|ENSG00000149262|Q96HW7-2|INTS4	33.921630207806714	0.38879399011744475	5				NaN	NaN	0	NaN	5610	3721	9329
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9334	28.213	NaN	1632.9	30	0	575.35	0.106	+			31529	QLKMAVTN	8	38	452.74998452616927	903.4854161191386	2	452.74853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QLKMAVTN_	ENSG00000112685|ENST00000230449|EXOC2	29.14955571784316	0.7342621283720113	5				NaN	NaN	0	NaN	5611	3721	9329
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9335	28.214	NaN	2248.5	30	0	268.44	0.039			+	10702	EYYYQFAQSK	10	67	663.8009979656828	1325.5874429981654	2	663.799560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EYYYQFAQSK_	REV__ENSG00000032742|ENST00000351808|IFT88;REV__IFT88|p.M728*|1|0.4|ENSG00000032742|chr13:20663579-20663579|A/-|frameshift_variant;REV__IFT88|p.S746Lfs*10|1|0.3|ENSG00000032742|chr13:20670999-20671000|-/G|frameshift_variant;REV__nc|ENSG00000032742|Q13099-1|IFT88;REV__nc|ENSG00000032742|Q13099-3|IFT88	40.05817265558897	0.5486090488315611	5				NaN	NaN	0	NaN	5612	3721	9329
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9336	28.215	NaN	917.01	30	0	88.591	0.143			+	-1	MTNRGMMVAK	10	58	585.7731831814193	NaN	0	585.7744750976562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Oxidation (M)	_M(Oxidation (M))TNRGM(Oxidation (M))MVAK_	REV__ENST00000458385.6_1_4:186111908-186111965:-|nuORF	26.69291269510374	0.4125295221340092	5				NaN	NaN	0	NaN	5613	3721	9329
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9350	28.247	NaN	7321.5	30	0	839.1	0.214	+			11026	FEKKYVATL	9	76	549.815163378463	1097.615773823726	2	549.8135986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FEKKYVATL_	ENSG00000132341|ENST00000543796|RAN	109.43880257439609	0.029570636687953285	5				NaN	NaN	0	NaN	5624	3724	9349
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9351	28.25	NaN	5746.7	30	0	2125.3	0.106			+	-1	FTKTIMKTL	9	57	366.8779562701196	NaN	0	366.8779296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_FTKTIM(Oxidation (M))KTL_	REV__ENST00000360864.8_1_20:62564729-62564939:+|nuORF	39.252832667884924	0.27938773122138094	5				NaN	NaN	0	NaN	5625	3724	9349
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9352	28.252	NaN	3336.7	30	0	360.08	0.106				-1	 	0	66	561.7943571706898	1121.5741614081794	2	561.7935180664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5626	3724	9349
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9353	28.254	NaN	4075	30	0	2375.6	0.106			+	18941	IVNPLSRK	8	51	463.79351246908476	925.5724720049695	2	463.7925720214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IVNPLSRK_	REV__ENST00000534277.5_1_16:31765895-31765964:+|nuORF	40.77816245573522	0.6514838689002179	5				NaN	NaN	0	NaN	5627	3724	9349
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9354	28.256	NaN	2628.4	30	0	473.54	0.106	+			51275	YRQPLNVY	8	56	526.780337603094	NaN	0	526.77978515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YRQPLNVY_	ENSG00000213186|ENST00000309784|TRIM59;nc|ENSG00000068885|Q9P2H3-3|IFT80	50.0245360154114	1.7418937515398478	5				NaN	NaN	0	NaN	5628	3724	9349
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9355	28.258	NaN	2538.2	30	0	479.57	0.034			+	50364	WVSAFTSL	8	56	455.73481080816254	NaN	0	455.7347412109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_WVSAFTSL_	REV__ENSG00000138759|ENST00000512123|FRAS1;REV__FRAS1|p.C3202Afs*11|1|0.32|ENSG00000138759|chr4:78508825-78508825|C/-|frameshift_variant;REV__FRAS1|p.G3456Afs*3|1|0.28|ENSG00000138759|chr4:78515987-78515987|G/-|frameshift_variant;REV__FRAS1|p.P3289Lfs*45|1|0.05|ENSG00000138759|chr4:78511358-78511359|-/T|frameshift_variant;REV__nc|ENSG00000138759|Q86XX4|FRAS1	52.29916861842294	1.7418937515398478	5				NaN	NaN	0	NaN	5629	3724	9349
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9356	28.258	NaN	2559.1	30	0	352.44	0.141				-1	CNDMTAEQM	9	64	537.6816825549644	1073.3488121767286	2	537.6809692382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Oxidation (M)	_CNDM(Oxidation (M))TAEQM(Oxidation (M))_	FGF7|p.P37A|1|0.47|ENSG00000140285|chr15:49424406-49424406|C/G|missense_variant	18.262085536374414	0.6112419832031293	5				NaN	NaN	0	NaN	5630	3724	9349
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9370	28.29	NaN	13848	30	0	3649.8	0.214	+			38804	SSMTAVLQK	9	62	482.7609193648926	963.5072857965852	2	482.7598876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSMTAVLQK_	ENST00000470658.1_1_21:44293721-44296875:-|nuORF	185.54966270084765	0.0007389233275946833	5				NaN	NaN	0	NaN	5641	3727	9369
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9371	28.293	NaN	4785.3	30	0	2536.9	0.106				-1	 	0	60	493.7805819179009	985.5466109026019	2	493.779541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5642	3727	9369
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9372	28.295	NaN	2923.2	30	0	256.81	0.106			+	9016	EGARTCVILM	10	69	546.7817944078906	1091.5490358825812	2	547.2806396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EGARTCVILM_	REV__ENST00000298251.4_1_11:124805898-124805979:-|nuORF	36.31764250033197	0.5830761606467809	5				NaN	NaN	0	NaN	5643	3727	9369
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9373	28.297	NaN	8743.7	30	0	1022.3	0.106			+	-1	ICLTLACL	8	65	453.74354591242627	905.4725388916526	2	453.7421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_ICLTLAC(Carbamidomethyl (C))L_	REV__ENST00000602645.1_1_13:32852704-32852767:+|nuORF	77.94384346573518	0.3407065481025094	5				NaN	NaN	0	NaN	5644	3727	9369
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9374	28.299	NaN	1728.2	30	0	205.41	0.106			+	2154	ALLHGGAL	8	44	376.227626331468	750.440699729736	2	376.22662353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ALLHGGAL_	REV__tr|U7T676|U7T676_FUSNUGlutaminaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=glsAPE=3SV=1	43.626045697637714	0.6338121648150432	5				NaN	NaN	0	NaN	5645	3727	9369
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9375	28.301	NaN	1435.3	30	0	155.05	0.035				-1	MGHSRPGKI	9	56	512.7696732577756	NaN	0	512.7692260742188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))MGHSRPGKI_	ENST00000409784.7_1_2:65318132-65325105:-|nuORF	39.252832667884924	0.27938773122138094	5				NaN	NaN	0	NaN	5646	3727	9369
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9376	28.301	NaN	3201.1	30	0	501.67	0.14	+			13073	GFKPFDLVI	9	72	518.2956184413384	NaN	0	518.2960205078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GFKPFDLVI_	ENSG00000136068|ENST00000295956|FLNB;ENST00000481470.5_1_3:58118395-58154450:+|nuORF;nc|ENSG00000136068|O75369-2|FLNB;nc|ENSG00000136068|O75369-3|FLNB;nc|ENSG00000136068|O75369-4|FLNB;nc|ENSG00000136068|O75369-5|FLNB;nc|ENSG00000136068|O75369-6|FLNB;nc|ENSG00000136068|O75369-7|FLNB;nc|ENSG00000136068|O75369-8|FLNB;nc|ENSG00000136068|O75369-9|FLNB	40.77816245573522	0.2702456086868081	5				NaN	NaN	0	NaN	5647	3727	9369
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9389	28.331	NaN	36924	30	0	4889.2	0.214			+	8826	EELLISLI	8	83	486.28662884239003	970.5587047515801	2	486.2847900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))EELLISLI_	REV__ENSG00000197746|ENST00000394936|PSAP;REV__ENST00000396990.6_1_9:34125177-34127354:-|nuORF;REV__ENST00000450964.1_1_9:34125177-34125690:-|nuORF;REV__nc|ENSG00000197746|P07602-2|PSAP;REV__nc|ENSG00000197746|P07602-3|PSAP;REV__PSAP|p.G365S|1|0.27|ENSG00000197746|chr10:71819813-71819813|C/T|missense_variant;REV__PSAP|p.N426Tfs*37|1|0.2|ENSG00000197746|chr10:71819538-71819538|T/-|frameshift_variant	57.81127852772723	0.5234495074909924	5				NaN	NaN	0	NaN	5657	3730	9388
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9390	28.334	NaN	4095.8	30	0	392.6	0.106	+			43041	TELAMRQSV	9	74	517.7700987293905	1033.525644525581	2	517.7689208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TELAMRQSV_	CON__P05784;ENSG00000111057|ENST00000388835|KRT18;ENST00000396959.2_1_3:12829511-12830132:-|nuORF;ENST00000424695.1_1_1:238654935-238655424:+|nuORF;ENST00000427733.1_1_13:90882929-90883235:+|nuORF;ENST00000549078.5_1_12:53344429-53346127:+|nuORF	101.45984612302182	0.0377122763612125	5				NaN	NaN	0	NaN	5658	3730	9388
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9391	28.336	NaN	3564.1	30	0	367.44	0.106	+			33080	REKLQEEML	9	73	588.3093743799216	1174.604195826643	2	588.80908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_REKLQEEML_	ENSG00000026025|ENST00000544301|VIM;ENST00000485947.1_1_10:17271421-17272784:+|nuORF	53.59686742100583	0.26699147868981316	5				NaN	NaN	0	NaN	5659	3730	9388
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9392	28.338	NaN	2072.9	30	0	141.8	0.106	+			20304	KEPVTPSAL	9	53	471.2681149372312	NaN	0	471.2682800292969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEPVTPSAL_	AURKB|p.R30Q|1|0.33|ENSG00000178999|chr17:8207800-8207800|C/T|missense_variant;ENSG00000178999|ENST00000585124|AURKB;ENST00000584561.1_1_17:8110402-8113858:-|nuORF;nc|ENSG00000178999|Q96GD4-2|AURKB;nc|ENSG00000178999|Q96GD4-3|AURKB;nc|ENSG00000178999|Q96GD4-5|AURKB	51.19269402634007	0.19847346126499396	5				NaN	NaN	0	NaN	5660	3730	9388
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9393	28.34	NaN	2573.6	30	0	175.76	0.106	+			36122	SEKNPSEVTL	10	58	552.2837255182687	1102.5528981033374	2	552.2828979492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SEKNPSEVTL_	ENSG00000080200|ENST00000389622|CRYBG3	56.632244143249146	0.3964695498866976	5				NaN	NaN	0	NaN	5661	3730	9388
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9394	28.342	NaN	2421.4	30	0	191.35	0.106	+			37812	SMLPGSGSVPK	11	57	530.2800509579299	1058.5455489826597	2	530.7816772460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SMLPGSGSVPK_	ENSG00000275835|ENST00000615383|TUBGCP5;nc|ENSG00000275835|Q96RT8-2|TUBGCP5;TUBGCP5|p.D713Ifs*5|1|0.18|ENSG00000275835|chr15:23009953-23009953|T/-|frameshift_variant	29.170058357718403	0.683821074385409	5				NaN	NaN	0	NaN	5662	3730	9388
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9395	28.344	NaN	4421.8	30	0	2365.9	0.038				-1	MLIFGTHVEL	10	42	392.54175052324956	1174.6034221699488	3	392.5408630371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_M(Oxidation (M))LIFGTHVEL_	ENST00000341068.7_1_2:112638385-112638421:-|nuORF	35.15202426646627	0.5927656479315102	5				NaN	NaN	0	NaN	5663	3730	9388
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9406	28.367	NaN	7035.6	30	0	4152.1	0.214			+	-1	PTVIDKMLVR	10	41	396.56522214304664	1186.67383702934	3	396.564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_PTVIDKM(Oxidation (M))LVR_	REV__CADPS|p.L1098Vfs*5|1|0.37|ENSG00000163618|chr3:62478299-62478300|-/T|frameshift_variant;REV__ENSG00000163618|ENST00000383710|CADPS;REV__nc|ENSG00000163618|Q9ULU8-2|CADPS;REV__nc|ENSG00000163618|Q9ULU8-3|CADPS;REV__nc|ENSG00000163618|Q9ULU8-4|CADPS	21.68575002086885	0.7027366847906487	5				NaN	NaN	0	NaN	5671	3733	9405
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9407	28.371	NaN	2091	30	0	146.2	0.106	+			41570	SVQEYFVRK	9	72	578.3128712961682	1154.6111896591362	2	578.3121948242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVQEYFVRK_	ENSG00000163781|ENST00000260810|TOPBP1;TOPBP1|p.K1266Nfs*10|1|0.13|ENSG00000163781|chr3:133616887-133616887|T/-|frameshift_variant;TOPBP1|p.R1378Sfs*18|1|0.04|ENSG00000163781|chr3:133611043-133611044|-/AAAAGAGAATGTG|frameshift_variant;TOPBP1|p.R964Efs*12|1|0.19|ENSG00000163781|chr3:133624090-133624090|T/-|frameshift_variant	63.42647028704847	0.1850514934184437	5				NaN	NaN	0	NaN	5672	3733	9405
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9408	28.373	NaN	2061.9	30	0	664.21	0.106				-1	 	0	47	329.20211137191245	656.3896698106249	2	329.20135498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5673	3733	9405
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9409	28.375	NaN	3969.6	30	0	483.18	0.106	+			1308	AETAGMIGVQ	10	63	488.7417440689327	975.4689352046654	2	488.74078369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AETAGMIGVQ_	CABP5|p.R145Gfs*24|1|0.27|ENSG00000105507|chr19:48034278-48034278|G/-|frameshift_variant;ENSG00000105507|ENST00000293255|CABP5	45.97224482568171	0.49411383603842696	5				NaN	NaN	0	NaN	5674	3733	9405
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9410	28.377	NaN	2238.3	30	0	426.99	0.106			+	-1	ASKKKLGVM	9	35	326.53071896330243	NaN	0	326.53082275390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_ASKKKLGVM(Oxidation (M))_	REV__ENSG00000100362|ENST00000417718|PVALB	20.94693142431847	0.3660861156085067	5				NaN	NaN	0	NaN	5675	3733	9405
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9411	28.378	NaN	2671.7	30	0	600.33	0.106				-1	 	0	64	507.27343443077757	1012.5323159283552	2	507.2718505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5676	3733	9405
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9412	28.38	NaN	1832.1	30	0	179.71	0.035	+			26207	LSSAWNLTL	9	65	502.7752527858963	1003.5359526385927	2	502.7768249511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSSAWNLTL_	ENST00000532710.5_1_11:4116045-4116234:+|nuORF	51.19269402634007	0.2889735674168909	5				NaN	NaN	0	NaN	5677	3733	9405
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9426	28.41	NaN	9899.9	30	0	5905.8	0.214				-1	 	0	45	357.1985486526768	1068.5738165582304	3	357.1977844238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5688	3736	9425
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9427	28.413	NaN	3042.2	30	0	816.19	0.106				-1	 	0	62	470.22553334449236	938.4365137557847	2	470.2245788574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5689	3736	9425
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9428	28.415	NaN	4193.8	30	0	704.96	0.106	+			47043	VLETSPDILL	10	54	367.21396768345846	1098.6200736505755	3	367.2134704589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VLETSPDILL_	ENSG00000119514|ENST00000375011|GALNT12	42.86426827375447	0.522752283233888	5				NaN	NaN	0	NaN	5690	3736	9425
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9429	28.417	NaN	2468.3	30	0	239.06	0.106	+			7448	DFIDFNII	8	61	498.75440460168113	995.4942562701623	2	498.75360107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DFIDFNII_	ENSG00000101695|ENST00000217740|RNF125	53.351449002276354	0.5676011784961348	5				NaN	NaN	0	NaN	5691	3736	9425
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9430	28.419	NaN	2378.9	30	0	168.56	0.106	+			38663	SSIQGQWPK	9	61	515.771078377218	1029.527603821236	2	515.7703247070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSIQGQWPK_	ARID4B|p.T939Rfs*2|2|0.22|ENSG00000054267|chr1:235182104-235182104|T/-|frameshift_variant;ENSG00000054267|ENST00000264183|ARID4B;ENST00000491632.5_1_1:235341091-235490234:-|nuORF;nc|ENSG00000054267|Q4LE39-2|ARID4B;nc|ENSG00000054267|Q4LE39-3|ARID4B;nc|ENSG00000054267|Q4LE39-4|ARID4B	51.19269402634007	0.2889735674168909	5				NaN	NaN	0	NaN	5692	3736	9425
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9431	28.421	NaN	2731.4	30	0	337.65	0.032				-1	 	0	52	404.22819629962356	806.4418396660471	2	404.226806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5693	3736	9425
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9432	28.421	NaN	1560.6	30	0	341.96	0.139	+			26665	LVFEAGALL	9	53	466.77582412327274	931.5370953133455	2	466.7750244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LVFEAGALL_	ENST00000344111.3_1_7:1008668-1008785:-|nuORF	35.200714571348534	0.47427825964483533	5				NaN	NaN	0	NaN	5694	3736	9425
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9443	28.447	NaN	3974	30	0	269.61	0.214			+	22543	KTRRCIVI	8	66	494.8068077947044	987.5990626562088	2	494.8057556152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTRRCIVI_	REV__ENST00000267068.5_2_13:33110836-33110986:-|nuORF	63.30626980617807	0.4690498839812213	5				NaN	NaN	0	NaN	5702	3739	9442
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9444	28.45	NaN	3410.8	30	0	636.72	0.106	+			34086	RSPPPGMGL	9	49	456.24272866712874	910.4709044010575	2	456.24176025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RSPPPGMGL_	ENSG00000116560|ENST00000357214|SFPQ;nc|ENSG00000116560|P23246-2|SFPQ	47.657333605630114	0.33044192980041115	5				NaN	NaN	0	NaN	5703	3739	9442
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9445	28.452	NaN	2502.2	30	0	405.74	0.106	+			49208	VVMVNQGLTK	10	65	544.8115867145998	1087.6086204959995	2	544.81103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVMVNQGLTK_	ENSG00000134057|ENST00000256442|CCNB1	136.5150327860613	0.011683253857074924	5				NaN	NaN	0	NaN	5704	3739	9442
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9446	28.454	NaN	1631.7	30	0	671.2	0.106				-1	 	0	42	443.26262320221167	884.5106934712234	2	443.2611389160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5705	3739	9442
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9447	28.456	NaN	2223.4	30	0	180.72	0.106	+			47018	VLAASSLYFK	10	67	549.815163378463	1097.615773823726	2	550.3184204101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VLAASSLYFK_	ENSG00000177311|ENST00000321464|ZBTB38;ZBTB38|p.R152Gfs*34|1|0.48|ENSG00000177311|chr3:141442837-141442837|A/-|frameshift_variant;ZBTB38|p.S181Pfs*5|1|0.24|ENSG00000177311|chr3:141442926-141442926|T/-|frameshift_variant	38.753607047826485	0.5606299674732264	5				NaN	NaN	0	NaN	5706	3739	9442
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9448	28.458	NaN	876.49	30	0	105.91	0.106			+	9758	ENIHSAVKNM	10	40	571.7832302312484	NaN	0	571.78369140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ENIHSAVKNM_	REV__ENSG00000156299|ENST00000541036|TIAM1;REV__nc|ENSG00000156299|Q13009-2|TIAM1	17.468008924990375	0.4201028297492154	5				NaN	NaN	0	NaN	5707	3739	9442
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9449	28.46	NaN	1248.2	30	0	66.558	0.034	+			2307	AMGIWVVSV	9	53	481.26287841796875	NaN	0	481.26287841796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AMGIWVVSV_	ENSG00000135577|ENST00000258042|NMBR	33.51558372728122	0.30835390848773375	5				NaN	NaN	0	NaN	5708	3739	9442
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9460	28.483	NaN	10012	30	0	1348.5	0.214			+	7049	CSYQGALSR	9	59	492.73287964191803	983.4512063506361	2	492.7320556640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CSYQGALSR_	REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-13|TTN;REV__nc|ENSG00000155657|Q8WZ42-2|TTN;REV__nc|ENSG00000155657|Q8WZ42-4|TTN;REV__nc|ENSG00000155657|Q8WZ42-5|TTN;REV__nc|ENSG00000155657|Q8WZ42-7|TTN;REV__nc|ENSG00000155657|Q8WZ42-8|TTN;REV__nc|ENSG00000155657|Q8WZ42|TTN;REV__TTN|p.A12650Gfs*4|1|0.4|ENSG00000155657|chr2:178633489-178633490|-/T|frameshift_variant;REV__TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;REV__TTN|p.D20259Rfs*40|1|0.44|ENSG00000155657|chr2:178583105-178583106|-/T|frameshift_variant;REV__TTN|p.D21555Ifs*6|1|0.33|ENSG00000155657|chr2:178576659-178576659|G/-|frameshift_variant;REV__TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;REV__TTN|p.E15132Sfs*22|1|0.27|ENSG00000155657|chr2:178612094-178612094|C/-|frameshift_variant;REV__TTN|p.E20392Dfs*6|1|0.04|ENSG00000155657|chr2:178582357-178582358|-/TTTAAAATTA|frameshift_variant;REV__TTN|p.E20392Kfs*4|1|0.02|ENSG00000155657|chr2:178582359-178582360|-/TTTT|frameshift_variant;REV__TTN|p.E9224Gfs*8|1|0.04|ENSG00000155657|chr2:178709697-178709698|-/TCTTATGATATCTTGAC|frameshift_variant;REV__TTN|p.F18705Lfs*8|1|0.37|ENSG00000155657|chr2:178590687-178590687|A/-|frameshift_variant;REV__TTN|p.G12742Vfs*2|1|0.05|ENSG00000155657|chr2:178632983-178632983|C/-|frameshift_variant;REV__TTN|p.G14712Dfs*11|1|0.37|ENSG00000155657|chr2:178614341-178614341|G/-|frameshift_variant;REV__TTN|p.G19920Afs*12|1|0.42|ENSG00000155657|chr2:178584961-178584961|G/-|frameshift_variant;REV__TTN|p.G22029Efs*22|2|0.13|ENSG00000155657|chr2:178575125-178575125|T/-|frameshift_variant;REV__TTN|p.I10495Nfs*4|1|0.37|ENSG00000155657|chr2:178685288-178685289|-/T|frameshift_variant;REV__TTN|p.I24998Nfs*2|1|0.35|ENSG00000155657|chr2:178566216-178566217|-/T|frameshift_variant;REV__TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;REV__TTN|p.I9225Cfs*34|1|0.06|ENSG00000155657|chr2:178709695-178709696|-/ATATCCATGAGCA|frameshift_variant;REV__TTN|p.K10923Rfs*104|2|0.23|ENSG00000155657|chr2:178679362-178679362|T/-|frameshift_variant;REV__TTN|p.K11381Nfs*25|1|0.07|ENSG00000155657|chr2:178671133-178671133|T/-|frameshift_variant;REV__TTN|p.K11556Sfs*15|1|0.39|ENSG00000155657|chr2:178652287-178652287|T/-|frameshift_variant;REV__TTN|p.K14271Qfs*5|1|0.02|ENSG00000155657|chr2:178617351-178617352|-/G|frameshift_variant;REV__TTN|p.K26626Nfs*34|1|0.34|ENSG00000155657|chr2:178561331-178561331|T/-|frameshift_variant;REV__TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;REV__TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;REV__TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant;REV__TTN|p.N13487Tfs*49|1|0.34|ENSG00000155657|chr2:178621335-178621335|T/-|frameshift_variant;REV__TTN|p.N15496Ifs*16|1|0.09|ENSG00000155657|chr2:178610116-178610116|T/-|frameshift_variant;REV__TTN|p.P16126Rfs*3|1|0.25|ENSG00000155657|chr2:178607301-178607302|TG/-|frameshift_variant;REV__TTN|p.P22810Hfs*10|1|0.03|ENSG00000155657|chr2:178572780-178572781|-/AAAT|frameshift_variant;REV__TTN|p.V10632Yfs*16|1|0.16|ENSG00000155657|chr2:178683254-178683254|T/-|frameshift_variant;REV__TTN|p.V11008Sfs*13|1|0.33|ENSG00000155657|chr2:178678146-178678147|-/T|frameshift_variant;REV__TTN|p.V11345Ffs*4|1|0.4|ENSG00000155657|chr2:178672044-178672044|T/-|frameshift_variant;REV__TTN|p.V13823*|1|0.28|ENSG00000155657|chr2:178620027-178620027|C/-|frameshift_variant;REV__TTN|p.V22573Cfs*4|2|0.31|ENSG00000155657|chr2:178573492-178573492|C/-|frameshift_variant;REV__TTN|p.V27442Cfs*4|1|0.05|ENSG00000155657|chr2:178558107-178558108|-/A|frameshift_variant	95.81516180277367	0.04847050768394289	5				NaN	NaN	0	NaN	5716	3742	9459
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9461	28.487	NaN	6342.9	30	0	1757.9	0.106				-1	 	0	63	429.7664292737699	857.5183056143399	2	429.76507568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5717	3742	9459
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9462	28.489	NaN	3214.5	30	0	262.42	0.106	+			27379	MKILFICH	8	64	502.7752527858963	1003.5359526385927	2	503.27423095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MKILFICH_	ENST00000483888.6_1_6:75904564-75904627:-|nuORF	35.200714571348534	0.6875396545722289	5				NaN	NaN	0	NaN	5718	3742	9459
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9463	28.491	NaN	2485.7	30	0	361.25	0.106	+			50654	YEDQTKPVL	9	74	546.7817944078906	1091.5490358825812	2	546.7828979492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YEDQTKPVL_	ENSG00000147853|ENST00000381809|AK3;nc|ENSG00000147853|Q9UIJ7-2|AK3;nc|ENSG00000147853|Q9UIJ7-3|AK3	79.71258880314673	0.09879134589249085	5				NaN	NaN	0	NaN	5719	3742	9459
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9464	28.492	NaN	1355.9	30	0	213.79	0.106	+			27272	MFILRPLV	8	39	330.2065973769017	987.5979627309051	3	330.2058410644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MFILRPLV_	ENST00000505849.5_1_1:1324040-1326969:-|nuORF	19.359975847455235	0.7988239741663654	5				NaN	NaN	0	NaN	5720	3742	9459
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9465	28.494	NaN	2167.9	30	0	221.9	0.036	+			18999	IVVEHIIMK	9	64	549.3234878827391	1096.632422832278	2	549.323486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_IVVEHIIM(Oxidation (M))K_	ENSG00000109133|ENST00000504986|TMEM33;TMEM33|p.L211P|1|0.2|ENSG00000109133|chr4:41954087-41954087|T/C|missense_variant	76.7741389293348	0.11149722112137898	5				NaN	NaN	0	NaN	5721	3742	9459
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9466	28.495	NaN	1248.8	30	0	372.31	0.14			+	50073	WGAGISVLV	9	37	451.2588999112671	NaN	0	451.2593078613281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_WGAGISVLV_	REV__ENST00000262811.10_1_19:18260667-18260754:+|nuORF	35.200714571348534	0.2998460331538257	5				NaN	NaN	0	NaN	5722	3742	9459
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9481	28.528	NaN	7663.7	30	0	1090.9	0.214				-1	VSQLLMCR	8	66	503.7628876697155	1005.511222406231	2	503.7622375488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_VSQLLMC(Carbamidomethyl (C))R_	ENST00000472364.1_1_21:47974114-47978399:+|nuORF;ENST00000481883.1_1_21:47977249-47978399:+|nuORF	53.351449002276354	0.5676011784961348	5				NaN	NaN	0	NaN	5734	3745	9480
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9482	28.531	NaN	3496.5	30	0	463.7	0.106	+			37866	SNRKVRALA	9	68	507.81122524615813	1013.6078975591163	2	507.810302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SNRKVRALA_	ENSG00000198354|ENST00000360028|DCAF12L2;ENSG00000198889|ENST00000371126|DCAF12L1	34.172542307311794	0.4838870758800184	5				NaN	NaN	0	NaN	5735	3745	9480
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9483	28.533	NaN	1978.9	30	0	314.82	0.106	+			43588	TIHVQGVI	8	51	433.758374114448	NaN	0	433.7583312988281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TIHVQGVI_	ENST00000374711.5_1_10:35464603-35477327:+|nuORF;ENST00000472813.1_1_10:35464831-35468254:+|nuORF;nc|ENSG00000095794|Q03060-1|CREM;nc|ENSG00000095794|Q03060-20|CREM;nc|ENSG00000095794|Q03060-21|CREM;nc|ENSG00000095794|Q03060-6|CREM;nc|ENSG00000095794|Q03060|CREM	57.81127852772723	1.7418937515398478	5				NaN	NaN	0	NaN	5736	3745	9480
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9484	28.535	NaN	5238.2	30	0	524.65	0.106				-1	PLPSLCAKF	9	69	516.779429930615	1031.54430692803	2	516.7774047851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_PLPSLC(Carbamidomethyl (C))AKF_	ENST00000528896.6_1_17:26941527-26941671:-|nuORF	68.78682469695295	0.14603441672067394	5				NaN	NaN	0	NaN	5737	3745	9480
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9485	28.537	NaN	2699.8	30	0	440.81	0.106	+			38133	SQAAAEGVSEL	11	64	531.2604650460348	1060.5063771588696	2	531.260009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SQAAAEGVSEL_	ENSG00000178764|ENST00000314393|ZHX2	98.58198989935565	0.06364242648159563	5				NaN	NaN	0	NaN	5738	3745	9480
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9486	28.539	NaN	2663.5	30	0	700.53	0.034	+			45979	VATEKAVEL	9	60	480.2733707832938	NaN	0	480.2740478515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VATEKAVEL_	ENSG00000163931|ENST00000462138|TKT;ENST00000460243.1_1_3:53262881-53263452:-|nuORF;ENST00000460343.5_1_3:53261754-53265639:-|nuORF;ENST00000461139.5_1_3:53259774-53265639:-|nuORF;ENST00000469678.1_1_3:53259917-53265542:-|nuORF;nc|ENSG00000163931|P29401-2|TKT	53.08895987439943	0.18540527177656715	5				NaN	NaN	0	NaN	5739	3745	9480
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9487	28.539	NaN	4032.2	30	0	1691.2	0.143	+			4916	ATQLLKLAH	9	41	332.2069458749396	993.5990082250189	3	332.20623779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATQLLKLAH_	ENSG00000148303|ENST00000323345|RPL7A;ENST00000424559.2_1_22:19780074-19780431:+|nuORF;ENST00000434317.1_1_7:102395625-102396051:+|nuORF;ENST00000437848.1_1_1:46117146-46117242:-|nuORF;ENST00000463740.5_1_9:136215098-136217195:+|nuORF;ENST00000468834.1_1_10:33346560-33347304:-|nuORF;ENST00000473054.1_1_14:68805457-68806021:-|nuORF;ENST00000485706.5_1_9:136216467-136216912:+|nuORF;ENST00000486157.1_1_5:78825151-78825526:+|nuORF	69.6276240434122	0.14239879520340665	5				NaN	NaN	0	NaN	5740	3745	9480
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9497	28.564	NaN	5910.9	30	0	1104.7	0.214	+			25473	LPRNEADEL	9	71	528.7706002934461	1055.5266476536922	2	528.7699584960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LPRNEADEL_	ENSG00000100342|ENST00000397278|APOL1;nc|ENSG00000100342|O14791-2|APOL1;nc|ENSG00000100342|O14791-3|APOL1	98.62937762414208	0.04060045538121712	5				NaN	NaN	0	NaN	5747	3748	9496
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9498	28.568	NaN	5391.9	30	0	556.92	0.106	+			21514	KNNYDVKN	8	66	497.7527598888775	993.490966844555	2	497.75140380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KNNYDVKN_	ENSG00000082516|ENST00000285873|GEMIN5;GEMIN5|p.H864Sfs*18|1|0.34|ENSG00000082516|chr5:154904549-154904550|-/A|frameshift_variant	44.116797842482775	0.6307669463330267	5				NaN	NaN	0	NaN	5748	3748	9496
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9499	28.57	NaN	3398.4	30	0	446.39	0.106	+			462	AAVNHISQL	9	62	476.76438185745144	951.5142107817029	2	476.7639465332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AAVNHISQL_	ENSG00000120029|ENST00000370033|ARMH3;ENST00000495001.1_1_10:103607287-103649300:-|nuORF;nc|ENSG00000120029|Q5T2E6-2|ARMH3	61.691277971877994	0.19951612995419254	5				NaN	NaN	0	NaN	5749	3748	9496
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9500	28.572	NaN	4614.5	30	0	1651.3	0.106	+			31003	QESEARIQQL	10	76	601.3133392626823	1200.6121255921646	2	601.3124389648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QESEARIQQL_	ENSG00000100242|ENST00000689035|SUN2;ENST00000469086.5_1_22:39136824-39138467:-|nuORF;ENST00000477262.5_1_22:39135390-39138407:-|nuORF;nc|ENSG00000100242|Q9UH99-2|SUN2;nc|ENSG00000100242|Q9UH99-3|SUN2	77.31757898189308	0.2175361111083648	5				NaN	NaN	0	NaN	5750	3748	9496
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9501	28.573	NaN	7425.7	30	0	2188.3	0.106				-1	LTVCPIPKVE	10	53	385.88575069271434	1154.635422678343	3	385.8852233886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_LTVC(Carbamidomethyl (C))PIPKVE_	ENST00000508906.6_3_6:26376811-26377501:+|nuORF	24.231819034082204	0.6819444564287812	5				NaN	NaN	0	NaN	5751	3748	9496
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9502	28.575	NaN	1264.5	30	0	206.05	0.106				-1	 	0	50	524.2493427052533	1046.4841324773065	2	524.2489013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5752	3748	9496
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9503	28.577	NaN	2365	30	0	796.92	0.034	+			1941	AISSPTVSR	9	57	459.2558069858931	916.4970610385863	2	459.2555236816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AISSPTVSR_	ENSG00000171368|ENST00000360578|TPPP	49.44154591367651	0.3095138337212152	5				NaN	NaN	0	NaN	5753	3748	9496
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9517	28.606	NaN	6428.5	30	0	853.62	0.214	+			33190	REVTAPGATTL	11	68	558.3069457628935	1114.599338592587	2	558.3065795898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_REVTAPGATTL_	ENSG00000176945|ENST00000447234|MUC20;ENST00000457750.1_1_3:195341833-195346985:+|nuORF;nc|ENSG00000176945|Q8N307-3|MUC20	79.03558427241974	0.16041291136517336	5				NaN	NaN	0	NaN	5764	3751	9516
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9518	28.61	NaN	5258	30	0	760.72	0.106				-1	 	0	71	564.8175901254184	1127.6206273176367	2	564.8170166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5765	3751	9516
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9519	28.612	NaN	6836.6	30	0	2476.2	0.106	+			26453	LTGYETER	8	66	484.73915657266843	967.4637602121369	2	484.73748779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LTGYETER_	ENSG00000119723|ENST00000334571|COQ6;ENST00000556588.5_1_14:74427827-74429699:+|nuORF;nc|ENSG00000119723|Q9Y2Z9-2|COQ6;nc|ENSG00000119723|Q9Y2Z9-3|COQ6	58.78195531508484	0.5138399468736706	5				NaN	NaN	0	NaN	5766	3751	9516
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9520	28.614	NaN	2137.6	30	0	602	0.106				-1	 	0	34	329.2188981952929	656.4232434573859	2	329.2182312011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5767	3751	9516
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9521	28.615	NaN	2013.4	30	0	195.13	0.106	+			26607	LTYEFVKQK	9	68	578.3252718553313	1154.6359907774624	2	578.32421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LTYEFVKQK_	ENSG00000179222|ENST00000326587|MAGED1;ENST00000494718.5_1_X:51641614-51641740:+|nuORF;MAGED1|p.P628Rfs*18|1|0.09|ENSG00000179222|chrX:51900215-51900215|C/-|frameshift_variant;nc|ENSG00000179222|Q9Y5V3-2|MAGED1	79.48907831485694	0.09975780661107167	5				NaN	NaN	0	NaN	5768	3751	9516
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9522	28.617	NaN	1882.1	30	0	426.68	0.106			+	12979	GETLPAYLI	9	59	488.7687373466695	NaN	0	488.7687072753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GETLPAYLI_	REV__COL14A1|p.G1524Efs*48|1|0.15|ENSG00000187955|chr8:120315546-120315546|A/-|frameshift_variant;REV__COL14A1|p.N1312Kfs*3|1|0.45|ENSG00000187955|chr8:120283741-120283742|-/A|frameshift_variant;REV__ENSG00000187955|ENST00000297848|COL14A1;REV__ENST00000432943.6_1_8:121160081-121289735:+|nuORF;REV__nc|ENSG00000187955|Q05707-2|COL14A1;REV__nc|ENSG00000187955|Q05707-3|COL14A1	45.97224482568171	0.23445038899310136	5				NaN	NaN	0	NaN	5769	3751	9516
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9523	28.619	NaN	2094.8	30	0	752.88	0.031				-1	 	0	37	351.2334841348365	700.452415336473	2	351.2326965332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5770	3751	9516
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9535	28.644	NaN	6631.5	30	0	988.89	0.214	+			735	AEAYLGKTV	9	63	476.26066956826776	NaN	0	476.2606201171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEAYLGKTV_	ENSG00000109971|ENST00000534624|HSPA8;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;ENST00000456928.2_1_12:4206979-4207195:+|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;HSPA8|p.K569Dfs*6|1|0.3|ENSG00000109971|chr11:123058302-123058303|TC/-|frameshift_variant;nc|ENSG00000109971|P11142-2|HSPA8	89.02883481214508	0.043554178677197526	5				NaN	NaN	0	NaN	5779	3754	9534
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9536	28.648	NaN	2861.9	30	0	617.58	0.106	+			47887	VSLGTPIMK	9	61	481.2732283947315	960.531903856263	2	481.27264404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_VSLGTPIM(Oxidation (M))K_	ECT2|p.K832Rfs*25|1|0.1|ENSG00000114346|chr3:172815693-172815693|A/-|frameshift_variant;ENSG00000114346|ENST00000392692|ECT2;nc|ENSG00000114346|Q9H8V3-2|ECT2;nc|ENSG00000114346|Q9H8V3-3|ECT2;nc|ENSG00000114346|Q9H8V3-4|ECT2	67.49366992349736	0.1516260258713357	5				NaN	NaN	0	NaN	5780	3754	9534
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9537	28.65	NaN	2657.2	30	0	265.07	0.106	+			18308	IPSFPTYDY	9	73	551.7578473860648	1101.5011418389295	2	551.7568969726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IPSFPTYDY_	ENSG00000166049|ENST00000370357|PASD1;ENST00000464219.1_1_X:150770025-150841134:+|nuORF;nc|ENSG00000166049|Q8IV76-2|PASD1;PASD1|p.K76Nfs*3|1|0.1|ENSG00000166049|chrX:151620945-151620945|A/-|frameshift_variant;PASD1|p.N139Tfs*3|1|0.05|ENSG00000166049|chrX:151621589-151621590|-/CTTT|frameshift_variant;PASD1|p.N589Tfs*62|1|0.39|ENSG00000166049|chrX:151672508-151672508|A/-|frameshift_variant;PASD1|p.V650Rfs*13|1|0.16|ENSG00000166049|chrX:151673952-151673953|-/C|frameshift_variant	51.33545320467046	0.2872990594074956	5				NaN	NaN	0	NaN	5781	3754	9534
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9538	28.652	NaN	2398.7	30	0	363.1	0.106	+			43627	TINVEKDYI	9	64	547.7914278766167	1093.5683028200333	2	547.7905883789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TINVEKDYI_	tr|U7T245|U7T245_FUSNUUDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanineligaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=murFPE=3SV=1	45.97224482568171	0.3502073465782774	5				NaN	NaN	0	NaN	5782	3754	9534
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9539	28.654	NaN	2902.8	30	0	472.9	0.106				-1	SVMSIKKKA	9	42	336.5350489073492	1006.5833173222477	3	336.53399658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_SVM(Oxidation (M))SIKKKA_	ENSG00000079156|ENST00000190611|OSBPL6;nc|ENSG00000079156|Q9BZF3-2|OSBPL6;nc|ENSG00000079156|Q9BZF3-3|OSBPL6;nc|ENSG00000079156|Q9BZF3-4|OSBPL6;nc|ENSG00000079156|Q9BZF3-5|OSBPL6;nc|ENSG00000079156|Q9BZF3-6|OSBPL6;OSBPL6|p.F898Lfs*31|1|0.36|ENSG00000079156|chr2:178394428-178394428|T/-|frameshift_variant;OSBPL6|p.P358Lfs*23|1|0.08|ENSG00000079156|chr2:178349305-178349305|C/-|frameshift_variant;OSBPL6|p.Y622Qfs*94|1|0.12|ENSG00000079156|chr2:178383264-178383265|-/TCAAG|frameshift_variant	26.69291269510374	0.5537881896960711	5				NaN	NaN	0	NaN	5783	3754	9534
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9540	28.655	NaN	1550.8	30	0	197.68	0.106				-1	SRARMLQY	8	60	520.7681461999487	NaN	0	520.7689208984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_SRARM(Oxidation (M))LQY_	ENST00000463742.1_1_8:103935654-103935939:-|nuORF	35.61828744233558	1.7418937515398478	5				NaN	NaN	0	NaN	5784	3754	9534
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9541	28.657	NaN	804.01	30	0	93.783	0.038			+	49979	WAGVLALAEMY	11	47	612.3092319428522	1222.6039109525043	2	612.3069458007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_WAGVLALAEMY_	REV__ENSG00000103160|ENST00000219439|HSDL1;REV__HSDL1|p.R55Afs*8|1|0.37|ENSG00000103160|chr16:84131159-84131159|G/-|frameshift_variant;REV__nc|ENSG00000103160|Q3SXM5-2|HSDL1	24.519189625965996	0.7326048944360514	5				NaN	NaN	0	NaN	5785	3754	9534
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9552	28.681	NaN	9856.8	30	0	990.5	0.214			+	6544	AYGLTQGKM	9	68	492.7440682602692	983.4735835873385	2	492.7430725097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_AYGLTQGKM(Oxidation (M))_	REV__RBM28|p.S539T|1|0.29|ENSG00000106344|chr7:128318055-128318055|A/T|missense_variant	76.7741389293348	0.11149722112137898	5				NaN	NaN	0	NaN	5793	3757	9551
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9553	28.684	NaN	2191.7	30	0	208.83	0.106	+			42581	TASSGHYIAY	10	57	535.2526989623623	1068.4908449915245	2	535.2522583007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TASSGHYIAY_	ENSG00000077254|ENST00000370794|USP33;nc|ENSG00000077254|Q8TEY7-3|USP33;nc|ENSG00000077254|Q8TEY7|USP33;USP33|p.I935Lfs*3|1|0.1|ENSG00000077254|chr1:77697343-77697343|T/-|frameshift_variant	42.396135135203025	0.5270658956260207	5				NaN	NaN	0	NaN	5794	3757	9551
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9554	28.686	NaN	3082.9	30	0	680.97	0.106				-1	 	0	52	451.2253075449143	900.4360621566286	2	451.22418212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5795	3757	9551
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9555	28.688	NaN	1712.6	30	0	327.49	0.106			+	19172	IYSSLRYL	8	56	507.7837956095817	1013.5530382859635	2	507.78289794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IYSSLRYL_	REV__ENSG00000102802|ENST00000380482|MEDAG	33.51558372728122	0.7005509609380386	5				NaN	NaN	0	NaN	5796	3757	9551
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9556	28.69	NaN	895.34	30	0	198.45	0.033	+			29900	PLPKALRG	8	36	426.27674953377294	NaN	0	426.2768249511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PLPKALRG_	ENST00000382291.7_1_20:334405-334570:+|nuORF	21.70233525837049	1.7418937515398478	5				NaN	NaN	0	NaN	5797	3757	9551
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9568	28.715	NaN	5772.2	30	0	610.14	0.214				-1	 	0	67	541.2867184434938	1080.5588839537875	2	541.2855224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5806	3760	9567
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9569	28.719	NaN	1600.2	30	0	204.34	0.106			+	7318	DASPEQPPHP	10	61	537.7475453452322	1073.4805377572643	2	537.74658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DASPEQPPHP_	REV__ENSG00000163689|ENST00000482387|CFAP20DC;REV__ENST00000468415.6_1_3:58739536-58855213:-|nuORF;REV__nc|ENSG00000163689|Q6ZVT6-2|CFAP20DC;REV__nc|ENSG00000163689|Q6ZVT6|CFAP20DC	64.20726635412375	0.3275756395432415	5				NaN	NaN	0	NaN	5807	3760	9567
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9570	28.721	NaN	1665.8	30	0	158.64	0.106	+			43331	TGASVIRAY	9	54	469.25960303529484	936.5046531373897	2	469.25830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TGASVIRAY_	ENSG00000108846|ENST00000285238|ABCC3;ENST00000502426.5_1_17:48736553-48755440:+|nuORF;nc|ENSG00000108846|O15438-2|ABCC3;nc|ENSG00000108846|O15438-4|ABCC3	51.19269402634007	0.2889735674168909	5				NaN	NaN	0	NaN	5808	3760	9567
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9571	28.723	NaN	1848.8	30	0	687.16	0.106				-1	 	0	45	446.2751846973871	890.5358164615742	2	446.2738342285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5809	3760	9567
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9572	28.725	NaN	1835.3	30	0	209.48	0.106			+	-1	LSWAPCIL	8	55	480.2524356775392	NaN	0	480.2521057128906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_LSWAPC(Carbamidomethyl (C))IL_	REV__ENST00000216044.9_1_22:39127397-39127706:+|nuORF	37.028477286268924	1.7418937515398478	5				NaN	NaN	0	NaN	5810	3760	9567
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9573	28.726	NaN	1489.1	30	0	199.91	0.106			+	-1	KLDRCDSPD	9	58	553.251537088057	NaN	0	553.2510375976562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_KLDRC(Carbamidomethyl (C))DSPD_	REV__ENSG00000077274|ENST00000324068|CAPN6	20.94693142431847	0.3660861156085067	5				NaN	NaN	0	NaN	5811	3760	9567
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9574	28.728	NaN	1621.1	30	0	331.37	0.034	+			36890	SIGTPLDPK	9	51	464.2616611563964	926.5087693795929	2	464.26025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SIGTPLDPK_	ENSG00000118965|ENST00000281405|WDR35;nc|ENSG00000118965|Q9P2L0|WDR35;WDR35|p.R782*|1|0.2|ENSG00000118965|chr2:19936322-19936323|-/A|frameshift_variant	42.86426827375447	0.38666266728046506	5				NaN	NaN	0	NaN	5812	3760	9567
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9588	28.757	NaN	7118.5	30	0	1560.5	0.214	+			41246	SVLGQAMEK	9	65	481.75342599629187	961.4922990593838	2	481.75189208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVLGQAMEK_	CYP51A1|p.L333Wfs*13|1|0.15|ENSG00000001630|chr7:92123208-92123208|A/-|frameshift_variant;ENSG00000001630|ENST00000003100|CYP51A1	76.16968421966216	0.11411088698345859	5				NaN	NaN	0	NaN	5823	3763	9587
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9589	28.761	NaN	3187.4	30	0	327.68	0.106				-1	 	0	63	478.7627417613158	955.5109305894316	2	478.76141357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5824	3763	9587
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9590	28.763	NaN	2743.7	30	0	299.71	0.106	+			23344	KYTEGVQSL	9	63	512.7698874580053	1023.5252219828106	2	512.7684326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KYTEGVQSL_	ENSG00000092201|ENST00000216297|SUPT16H;ENST00000537175.1_1_12:16552211-16552709:-|nuORF	65.15724298150197	0.17062369902793603	5				NaN	NaN	0	NaN	5825	3763	9587
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9591	28.765	NaN	2425.9	30	0	272.7	0.106			+	29520	PDVGYTELTQA	11	70	597.2858276367188	NaN	0	597.2858276367188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PDVGYTELTQA_	REV__ENSG00000171877|ENST00000417257|FRMD5;REV__ENST00000421674.5_1_15:44177877-44211195:-|nuORF;REV__nc|ENSG00000171877|Q7Z6J6-2|FRMD5	39.252832667884924	0.39048276625972167	5				NaN	NaN	0	NaN	5826	3763	9587
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9592	28.766	NaN	3602.2	30	0	408.03	0.106	+			40281	STSQTFIYK	9	64	537.7783283879357	1073.5421038426714	2	538.2785034179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STSQTFIYK_	ENSG00000004487|ENST00000400181|KDM1A;nc|ENSG00000004487|O60341|KDM1A	51.52775601994872	0.28504342437107444	5				NaN	NaN	0	NaN	5827	3763	9587
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9593	28.768	NaN	930.92	30	0	146.51	0.106			+	21471	KNGTFIIE	8	47	461.25537363270047	NaN	0	461.2545471191406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KNGTFIIE_	REV__tr|U7T096|U7T096_FUSNUFimbrialassemblyproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00783PE=4SV=1	34.172542307311794	1.7418937515398478	5				NaN	NaN	0	NaN	5828	3763	9587
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9594	28.77	NaN	1231.1	30	0	139.23	0.037			+	4382	ATHFHVLVPP	10	36	373.20937093248546	NaN	0	373.2091369628906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATHFHVLVPP_	REV__ENST00000474649.1_1_7:100184248-100189648:+|nuORF	17.364965105453717	0.4201028297492154	5				NaN	NaN	0	NaN	5829	3763	9587
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9608	28.8	NaN	12528	30	0	4939.4	0.214				-1	 	0	54	432.23584381943846	862.4571347056769	2	432.2347412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5840	3766	9607
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9609	28.803	NaN	4908	30	0	580.4	0.106			+	13076	GFLIMMTFLI	10	67	601.3205505733464	1200.6265482134927	2	601.3198852539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_GFLIMM(Oxidation (M))TFLI_	REV__tr|U7SN94|U7SN94_FUSNULysozymeinhibitorLprIN-terminaldomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01758PE=4SV=1	44.116797842482775	0.5112108506279902	5				NaN	NaN	0	NaN	5841	3766	9607
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9610	28.805	NaN	3414	30	0	727.74	0.106	+			34087	RSPPPGMGL	9	59	456.24272866712874	910.4709044010575	2	456.24163818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RSPPPGMGL_	ENSG00000116560|ENST00000357214|SFPQ;nc|ENSG00000116560|P23246-2|SFPQ	52.936696900407355	0.27249468807391813	5				NaN	NaN	0	NaN	5842	3766	9607
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9611	28.807	NaN	4798.6	30	0	289.99	0.106	+			12436	GEASKLQQF	9	67	504.2622406171587	1006.5099283011174	2	504.26153564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEASKLQQF_	ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1	122.93914200107957	0.019420478173996256	5				NaN	NaN	0	NaN	5843	3766	9607
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9612	28.809	NaN	4926.3	30	0	2567	0.106				-1	 	0	59	448.27261148581164	894.5306700384233	2	448.2718200683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5844	3766	9607
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9613	28.811	NaN	1865.3	30	0	233.31	0.038	+			37794	SLYSVPEGQSK	11	53	597.8053954382954	1193.5962379433906	2	597.804443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLYSVPEGQSK_	ENSG00000184831|ENST00000379226|APOO;nc|ENSG00000184831|Q9BUR5-2|APOO	48.601550744091256	0.44024757269956427	5				NaN	NaN	0	NaN	5845	3766	9607
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9614	28.811	NaN	1392.6	30	0	215.61	0.142			+	7074	CVKEGDPGLLF	11	54	589.2986395166747	1176.5827261001493	2	589.7960205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_CVKEGDPGLLF_	REV__ENSG00000182329|ENST00000498697|KIAA2012;REV__nc|ENSG00000182329|Q0VF49|KIAA2012	27.047317107675042	0.7060868989289394	5				NaN	NaN	0	NaN	5846	3766	9607
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9628	28.843	NaN	3649.7	30	0	540.85	0.214				-1	 	0	54	474.25175510798175	946.4889572827635	2	474.25054931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5857	3769	9627
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9629	28.847	NaN	3946.3	30	0	916.28	0.106	+			24215	LERMGANSL	9	60	495.755397789467	989.496242645734	2	495.7552795410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LERMGANSL_	ENSG00000099783|ENST00000325495|HNRNPM;ENSG00000099783|ENST00000325495|HNRNPM;nc|ENSG00000099783|P52272-2|HNRNPM;nc|ENSG00000099783|P52272-2|HNRNPM	109.43880257439609	0.029570636687953285	5				NaN	NaN	0	NaN	5858	3769	9627
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9630	28.849	NaN	11145	30	0	6950.5	0.106	+			46393	VELQRIHRAP	10	46	406.90740142881833	1217.700374886655	3	407.24078369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VELQRIHRAP_	ENST00000576406.5_1_17:1665378-1673212:+|nuORF	16.473147378115264	0.7327422906225664	5				NaN	NaN	0	NaN	5859	3769	9627
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9631	28.85	NaN	2342.7	30	0	208.25	0.106	+			36189	SELITKAVA	9	62	466.27765178823955	930.5407506432791	2	466.2764587402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SELITKAVA_	ENSG00000124575|ENST00000244534|H1-3;ENSG00000168298|ENST00000304218|H1-4;ENSG00000184357|ENST00000331442|H1-5;ENSG00000187837|ENST00000343677|H1-2	72.87924865735499	0.12833875048249987	5				NaN	NaN	0	NaN	5860	3769	9627
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9632	28.852	NaN	4273.6	30	0	416.85	0.106				-1	 	0	64	528.3171168560879	1054.6196807789756	2	528.3168334960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5861	3769	9627
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9633	28.854	NaN	2158.7	30	0	236.79	0.039	+			26463	LTIQSGEQPYK	11	67	632.3338514718391	1262.6531500104782	2	632.3323364257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LTIQSGEQPYK_	ENSG00000168653|ENST00000372969|NDUFS5	120.63048641472336	0.018968965619156397	5				NaN	NaN	0	NaN	5862	3769	9627
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9634	28.855	NaN	1787.9	30	0	187.6	0.142	+			10969	FEAQGKPEL	9	57	509.76498080571315	1017.5154086782263	2	509.7641906738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FEAQGKPEL_	ENSG00000088356|ENST00000202017|PDRG1	57.148748479083515	0.2373828479495039	5				NaN	NaN	0	NaN	5863	3769	9627
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9648	28.886	NaN	5121.8	30	0	836.08	0.214	+			41044	SVIDTSTIVRK	11	70	609.8575395887034	1217.7005262442067	2	609.8561401367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVIDTSTIVRK_	ENSG00000115808|ENST00000263918|STRN;ENST00000495595.1_1_2:37111179-37129881:-|nuORF;nc|ENSG00000115808|O43815-2|STRN;STRN|p.V346*|1|0.24|ENSG00000115808|chr2:36886722-36886722|C/-|frameshift_variant	87.71336657091298	0.10813547024994734	5				NaN	NaN	0	NaN	5874	3772	9647
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9649	28.89	NaN	12211	30	0	2888.3	0.106				-1	 	0	54	352.54713014211825	1054.6195610265547	3	352.5464172363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5875	3772	9647
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9650	28.891	NaN	4575.6	30	0	958.53	0.106	+			27081	MAKEILTKQ	9	63	531.3042143352367	1060.5938757372733	2	531.3033447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MAKEILTKQ_	tr|U7STU9|U7STU9_FUSNUN-acetyltransferasedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00990PE=4SV=1	40.77816245573522	0.41113185337114944	5				NaN	NaN	0	NaN	5876	3772	9647
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9651	28.893	NaN	1917.4	30	0	340.1	0.106			+	10429	EVKAALFLAA	10	62	516.8067760863282	1031.5989992394564	2	516.8058471679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EVKAALFLAA_	REV__ENSG00000129315|ENST00000261900|CCNT1;REV__ENST00000550457.1_1_12:49099541-49108300:-|nuORF;REV__nc|ENSG00000129315|O60563-2|CCNT1	45.02220120713402	0.5028680121232791	5				NaN	NaN	0	NaN	5877	3772	9647
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9652	28.895	NaN	4683.9	30	0	726.23	0.106	+			27963	MVLCKPKLL	9	68	522.8196046171821	1043.6246563011641	2	522.8184204101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MVLCKPKLL_	ENSG00000214413|ENST00000448814|BBIP1;ENST00000605265.1_1_10:112660120-112660297:-|nuORF;nc|ENSG00000214413|A8MTZ0-2|BBIP1;nc|ENSG00000214413|A8MTZ0-3|BBIP1	39.252832667884924	0.4290233611298554	5				NaN	NaN	0	NaN	5878	3772	9647
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9653	28.897	NaN	3536.6	30	0	429.6	0.036	+			49696	VYKPAQNSW	9	70	546.7764487806222	NaN	0	546.7774658203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VYKPAQNSW_	ENSG00000120696|ENST00000379483|KBTBD7;ENSG00000165572|ENST00000379485|KBTBD6;KBTBD6|p.C613Afs*34|1|0.51|ENSG00000165572|chr13:41130675-41130675|A/-|frameshift_variant	87.69643885390035	0.04624013146650493	5				NaN	NaN	0	NaN	5879	3772	9647
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9654	28.898	NaN	2643.7	30	0	1234.9	0.142			+	7897	DRVSELKEMA	10	51	589.2986395166747	1176.5827261001493	2	589.2977294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DRVSELKEMA_	REV__ENSG00000072501|ENST00000322213|SMC1A	24.519189625965996	0.6795976720565101	5				NaN	NaN	0	NaN	5880	3772	9647
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9668	28.929	NaN	4141.9	30	0	794.49	0.214	+			5471	AVAAFQVEK	9	65	481.76875743758274	NaN	0	481.7687072753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVAAFQVEK_	ENSG00000185000|ENST00000528718|DGAT1;ENST00000525371.1_1_8:145542007-145542573:-|nuORF;ENST00000531896.5_1_8:145541583-145550314:-|nuORF	90.60085204095205	0.040385177724871185	5				NaN	NaN	0	NaN	5891	3775	9667
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9669	28.933	NaN	6125.8	30	0	889.85	0.106	+			41378	SVMGVTVSR	9	55	468.25222738313005	NaN	0	468.25201416015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVMGVTVSR_	DIP2B|p.A1021Cfs*11|1|0.32|ENSG00000066084|chr12:50721279-50721280|-/CTGTATGCAC|frameshift_variant;DIP2B|p.I979Afs*17|1|0.13|ENSG00000066084|chr12:50718790-50718815|AAATAGAAGAGAATGATTTGGTGAGG/-|frameshift_variant;DIP2B|p.V1240Dfs*9|1|0.05|ENSG00000066084|chr12:50731445-50731446|-/ATATTTAC|frameshift_variant;DIP2B|p.V893Gfs*91|1|0.06|ENSG00000066084|chr12:50714417-50714418|-/G|frameshift_variant;ENSG00000066084|ENST00000301180|DIP2B	106.68306549817024	0.012692596758972883	5				NaN	NaN	0	NaN	5892	3775	9667
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9670	28.935	NaN	4312	30	0	608.2	0.106				-1	 	0	74	457.2723357888514	912.5301186445029	2	457.2708435058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5893	3775	9667
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9671	28.936	NaN	6780.1	30	0	2211.5	0.106	+			14090	GSLFLRTPK	9	35	340.2069720757065	1017.5990868273195	3	340.2062072753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GSLFLRTPK_	ENSG00000134333|ENST00000422447|LDHA;ENST00000437325.2_1_1:235901419-235901638:+|nuORF;ENST00000494573.6_1_11:18418389-18421097:+|nuORF;LDHA|p.E176Kfs*8|1|0.28|ENSG00000134333|chr11:18402943-18402943|G/-|frameshift_variant;LDHA|p.W227Tfs*16|1|0.06|ENSG00000134333|chr11:18403779-18403780|-/AC|frameshift_variant;nc|ENSG00000134333|P00338-2|LDHA;nc|ENSG00000134333|P00338-3|LDHA;nc|ENSG00000134333|P00338-4|LDHA;nc|ENSG00000134333|P00338-5|LDHA	24.519189625965996	0.574102787014149	5				NaN	NaN	0	NaN	5894	3775	9667
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9672	28.938	NaN	2318.3	30	0	229.46	0.106	+			11147	FGGPPPKA	8	50	385.7142082720307	769.4138636108614	2	385.7131652832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FGGPPPKA_	ENST00000484157.5_1_1:155107991-155108063:+|nuORF	54.76467175910256	0.5536104764165384	5				NaN	NaN	0	NaN	5895	3775	9667
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9673	28.94	NaN	2061.5	30	0	106.13	0.037	+			11989	FVRRPDDGAL	10	62	573.3069577874603	1144.5993626417205	2	573.3060913085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FVRRPDDGAL_	ENSG00000184163|ENST00000330388|C1QTNF12	47.657333605630114	0.47858658696240314	5				NaN	NaN	0	NaN	5896	3775	9667
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9674	28.941	NaN	3420.5	30	0	1685.6	0.144	+			31533	QLKTTLEVL	9	53	348.8818284051229	1043.6236558155688	3	348.8810119628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QLKTTLEVL_	ENSG00000076382|ENST00000321765|SPAG5;ENSG00000258472|ENST00000531839|unknown	40.77816245573522	0.41113185337114944	5				NaN	NaN	0	NaN	5897	3775	9667
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9689	28.974	NaN	28902	30	0	8348.5	0.214				-1	 	0	66	468.7149092536984	935.4152655741968	2	468.7138977050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5909	3778	9688
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9690	28.978	NaN	4604.9	30	0	461.98	0.106			+	21393	KMLTKRSI	8	66	496.7991304469094	991.5837079606188	2	496.7981262207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_KM(Oxidation (M))LTKRSI_	REV__ATAD5|p.K421Sfs*17|1|0.35|ENSG00000176208|chr17:30835339-30835339|A/-|frameshift_variant	47.91560031466742	0.6071945918984287	5				NaN	NaN	0	NaN	5910	3778	9688
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9691	28.98	NaN	8363.5	30	0	915.97	0.106	+			28368	NEKVIEHIM	9	76	556.7928053550141	1111.5710577768282	2	556.7926025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NEKVIEHIM_	ENSG00000163220|ENST00000368738|S100A9	145.46060221211434	0.007927189773590037	5				NaN	NaN	0	NaN	5911	3778	9688
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9692	28.981	NaN	5458.7	30	0	1733.5	0.106				-1	SKTIMLKR	8	40	331.5349982286293	991.5831652860879	3	331.534423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_SKTIM(Oxidation (M))LKR_	ENSG00000004534|ENST00000266022|RBM6;ENST00000441115.5_1_3:50012785-50103056:+|nuORF;ENST00000483350.1_1_3:50036895-50096022:+|nuORF;nc|ENSG00000004534|P78332-2|RBM6;RBM6|p.K760Nfs*101|1|0.25|ENSG00000004534|chr3:50061143-50061143|A/-|frameshift_variant;RBM6|p.K834Nfs*27|4|0.24|ENSG00000004534|chr3:50062017-50062017|A/-|frameshift_variant	35.61828744233558	0.6843154725607303	5				NaN	NaN	0	NaN	5912	3778	9688
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9693	28.983	NaN	2058.8	30	0	292.16	0.106				-1	 	0	57	407.73805117930146	813.461549425403	2	407.737060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5913	3778	9688
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9694	28.985	NaN	1728.8	30	0	218.17	0.033			+	24856	LKEAQLAE	8	50	451.2542116127631	900.4938702923262	2	451.2532653808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LKEAQLAE_	REV__nc|ENSG00000183199|Q58FF7|HSP90AB3P	37.15910966729921	0.6739408393984688	5				NaN	NaN	0	NaN	5914	3778	9688
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9695	28.986	NaN	1192.1	30	0	132.89	0.144	+			45110	TVIQSTQGMYK	11	61	628.3211059570312	NaN	0	628.3211059570312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TVIQSTQGMYK_	ENSG00000165434|ENST00000298198|PGM2L1;PGM2L1|p.S149Qfs*22|1|0.29|ENSG00000165434|chr11:74370928-74370928|A/-|frameshift_variant;PGM2L1|p.S299Lfs*19|1|0.24|ENSG00000165434|chr11:74347192-74347192|A/-|frameshift_variant	30.139142570347243	0.4310986225962497	5				NaN	NaN	0	NaN	5915	3778	9688
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9710	29.019	NaN	4221.7	30	0	609.1	0.215			+	17738	IEQAWVPSL	9	69	521.7812373789886	1041.5479218247772	2	521.7805786132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IEQAWVPSL_	REV__ENST00000523752.5_1_8:22878943-22879036:-|nuORF	81.52500206392136	0.09095445986635249	5				NaN	NaN	0	NaN	5927	3781	9709
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9711	29.023	NaN	1757.1	30	0	158.9	0.106	+			36392	SETKKGFYSL	10	54	580.3046519269077	1158.5947509206153	2	580.3037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SETKKGFYSL_	ENSG00000155926|ENST00000338087|SLA;nc|ENSG00000155926|Q13239-2|SLA;nc|ENSG00000155926|Q13239-3|SLA;nc|ENSG00000155926|Q13239-5|SLA	70.8162118820467	0.27065172005956	5				NaN	NaN	0	NaN	5928	3781	9709
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9712	29.025	NaN	1740.1	30	0	581	0.106				-1	 	0	44	430.74094306179427	859.4673331903886	2	430.7400207519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5929	3781	9709
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9713	29.026	NaN	1968	30	0	567.71	0.106	+			9080	EGHKPAAAI	9	44	447.24639836171224	892.4782437902245	2	447.24493408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EGHKPAAAI_	tr|U7T2S8|U7T2S8_FUSNU(R)-2-hydroxyglutaryl-CoAdehydratasesubunitalphaOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00401PE=3SV=1	29.14955571784316	0.5308295550522326	5				NaN	NaN	0	NaN	5930	3781	9709
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9714	29.028	NaN	2306.1	30	0	398.42	0.106				-1	ASTKKVVMK	9	38	336.5350489073492	1006.5833173222477	3	336.53436279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_ASTKKVVM(Oxidation (M))K_	CFAP47|p.F1567Vfs*4|1|0.31|ENSG00000165164|chrX:36098829-36098830|-/G|frameshift_variant;CFAP47|p.H2345Afs*15|1|0.09|ENSG00000165164|chrX:36236809-36236810|-/A|frameshift_variant;CFAP47|p.K734Nfs*6|1|0.13|ENSG00000165164|chrX:35971909-35971909|A/-|frameshift_variant;CFAP47|p.P2326Tfs*34|1|0.26|ENSG00000165164|chrX:36236751-36236752|-/A|frameshift_variant;ENSG00000165164|ENST00000378653|CFAP47;nc|ENSG00000165164|Q6ZTR5-1|CFAP47;nc|ENSG00000165164|Q6ZTR5-2|CFAP47;nc|ENSG00000165164|Q6ZTR5-6|CFAP47	25.57405402267927	0.5642445186134241	5				NaN	NaN	0	NaN	5931	3781	9709
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9715	29.03	NaN	1267.8	30	0	191.01	0.032	+			18247	IPAGLHGT	8	35	383.21714348882	764.41973404444	2	383.216064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IPAGLHGT_	ENST00000534922.5_1_12:133201238-133201883:-|nuORF	21.70233525837049	0.7917639344264583	5				NaN	NaN	0	NaN	5932	3781	9709
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9716	29.03	NaN	839.74	30	0	95.37	0.143				-1	SVKLGFEEAGC	11	40	598.7853393554688	NaN	0	598.7853393554688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_SVKLGFEEAGC(Carbamidomethyl (C))_	ENSG00000151835|ENST00000382292|SACS;nc|ENSG00000151835|Q9NZJ4-2|SACS;SACS|p.I3485Lfs*10|1|0.24|ENSG00000151835|chr13:23333423-23333423|T/-|frameshift_variant;SACS|p.K2931Nfs*22|1|0.23|ENSG00000151835|chr13:23335083-23335083|T/-|frameshift_variant;SACS|p.L2871Ffs*29|1|0.26|ENSG00000151835|chr13:23335263-23335264|-/A|frameshift_variant;SACS|p.L3102*|1|0.33|ENSG00000151835|chr13:23334571-23334571|A/-|frameshift_variant;SACS|p.P2063Sfs*7|1|0.36|ENSG00000151835|chr13:23337689-23337690|-/A|frameshift_variant;SACS|p.S2058Ffs*2|1|0.3|ENSG00000151835|chr13:23337703-23337704|-/A|frameshift_variant;SACS|p.S2058Lfs*19|1|0.1|ENSG00000151835|chr13:23337704-23337704|A/-|frameshift_variant;SACS|p.S4423Ffs*42|1|0.18|ENSG00000151835|chr13:23330610-23330611|-/G|frameshift_variant	18.262085536374414	0.456735970842152	5				NaN	NaN	0	NaN	5933	3781	9709
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9727	29.058	NaN	4138.9	30	0	517.26	0.214	+			35962	SEGRTFEM	8	70	478.711604077162	955.408655221124	2	478.7103271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEGRTFEM_	ENSG00000136068|ENST00000295956|FLNB;ENST00000481470.5_1_3:58118395-58154450:+|nuORF;nc|ENSG00000136068|O75369-2|FLNB;nc|ENSG00000136068|O75369-3|FLNB;nc|ENSG00000136068|O75369-4|FLNB;nc|ENSG00000136068|O75369-5|FLNB;nc|ENSG00000136068|O75369-6|FLNB;nc|ENSG00000136068|O75369-7|FLNB;nc|ENSG00000136068|O75369-8|FLNB;nc|ENSG00000136068|O75369-9|FLNB	51.19269402634007	0.5868595481438337	5				NaN	NaN	0	NaN	5941	3784	9726
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9728	29.062	NaN	6266.9	30	0	1427.5	0.106	+			14595	GTGALILQK	9	67	450.78023508176534	899.5459172303307	2	450.779052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTGALILQK_	ENSG00000149418|ENST00000278742|ST14	122.1759843771914	0.019882474861609503	5				NaN	NaN	0	NaN	5942	3784	9726
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9729	29.064	NaN	2136.6	30	0	536.59	0.106	+			28452	NFFGLYCI	8	57	488.7343137693067	975.4540746054134	2	488.73260498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NFFGLYCI_	ENSG00000012963|ENST00000013070|UBR7	39.021493756699265	0.6623843612266921	5				NaN	NaN	0	NaN	5943	3784	9726
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9730	29.065	NaN	2737.1	30	0	439.98	0.106	+			43257	TEYETQVKV	9	64	548.7799392248456	1095.5453255164912	2	548.7794189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TEYETQVKV_	ENSG00000120948|ENST00000240185|TARDBP;nc|ENSG00000120948|Q13148-4|TARDBP	47.95952297671804	0.32689736945648856	5				NaN	NaN	0	NaN	5944	3784	9726
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9731	29.067	NaN	1933.2	30	0	273.51	0.106	+			31334	QISCIGKLVL	10	64	537.3226483735338	1072.6307438138674	2	537.3214111328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QISCIGKLVL_	ENSG00000173175|ENST00000462833|ADCY5;nc|ENSG00000173175|O95622-2|ADCY5	31.529811441608018	0.6223461015008678	5				NaN	NaN	0	NaN	5945	3784	9726
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9732	29.069	NaN	3446.1	30	0	798.67	0.106	+			14026	GSGAFGTVYK	10	60	493.7517349369233	985.4889169406466	2	493.7502746582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GSGAFGTVYK_	ENSG00000141736|ENST00000269571|ERBB2;ENSG00000146648|ENST00000275493|EGFR;ENSG00000178568|ENST00000342788|ERBB4;ENST00000484594.5_1_2:212426591-213403254:-|nuORF;ENST00000583038.5_1_17:37872360-37881463:+|nuORF;ERBB4|p.H801Mfs*27|1|0.39|ENSG00000178568|chr2:211561989-211561989|G/-|frameshift_variant;ERBB4|p.N1177Mfs*27|1|0.33|ENSG00000178568|chr2:211384012-211384012|T/-|frameshift_variant;nc|ENSG00000141736|P04626-2|ERBB2;nc|ENSG00000141736|P04626-3|ERBB2;nc|ENSG00000141736|P04626-4|ERBB2;nc|ENSG00000141736|P04626-5|ERBB2;nc|ENSG00000141736|P04626-6|ERBB2;nc|ENSG00000178568|Q15303-2|ERBB4;nc|ENSG00000178568|Q15303-3|ERBB4;nc|ENSG00000178568|Q15303-4|ERBB4	70.8162118820467	0.27065172005956	5				NaN	NaN	0	NaN	5946	3784	9726
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9733	29.071	NaN	2164.3	30	0	371.44	0.036	+			22392	KTIIFVETK	9	67	539.8304661442992	1077.6463793553983	2	539.8291625976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KTIIFVETK_	ENSG00000100201|ENST00000403230|DDX17;ENST00000216019.11_1_22:38888049-38902242:-|nuORF;ENST00000432525.5_1_22:38886367-38903636:-|nuORF;ENST00000497196.5_1_22:38889517-38891019:-|nuORF;nc|ENSG00000100201|Q92841-1|DDX17;nc|ENSG00000100201|Q92841-2|DDX17;nc|ENSG00000100201|Q92841-3|DDX17	56.632244143249146	0.24168844994051353	5				NaN	NaN	0	NaN	5947	3784	9726
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9742	29.091	NaN	5377.5	30	0	1084.5	0.214				-1	 	0	69	451.2253075449143	900.4360621566286	2	451.22418212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5953	3787	9741
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9743	29.094	NaN	2255	30	0	499.45	0.106			+	47402	VPNFLESKR	9	64	545.3077287899376	1088.6009046466752	2	545.306396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VPNFLESKR_	REV__ENSG00000255529|ENST00000299638|POLR2M;REV__ENST00000494490.1_3_15:57999305-58006874:+|nuORF;REV__nc|ENSG00000255529|P0CAP2-3|POLR2M	27.882242232435846	0.5426732730940306	5				NaN	NaN	0	NaN	5954	3787	9741
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9744	29.096	NaN	1958.4	30	0	197.52	0.036	+			9739	ENAVLPLCFV	10	59	552.7937820038912	1103.5730110745824	2	552.793701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ENAVLPLCFV_	ENSG00000184992|ENST00000341446|BRI3BP	62.107414245175825	0.3466735403679669	5				NaN	NaN	0	NaN	5955	3787	9741
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9754	29.118	NaN	2613.4	30	0	1181	0.214	+			13551	GLSMQILVN	9	54	495.76775710490546	989.5209612766109	2	495.7655334472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_GLSM(Oxidation (M))QILVN_	ENST00000405333.5_1_2:10584278-10584637:-|nuORF	53.351449002276354	0.2690372970092375	5				NaN	NaN	0	NaN	5962	3790	9753
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9755	29.122	NaN	3790.9	30	0	602.03	0.036				-1	YTTMQTLTK	9	69	551.7757118253745	1101.536870717549	2	551.774169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_YTTM(Oxidation (M))QTLTK_	ENSG00000110906|ENST00000228495|KCTD10;ENST00000535747.5_1_12:109898344-109915067:-|nuORF;ENST00000538377.1_1_12:109907257-109915067:-|nuORF;nc|ENSG00000110906|Q9H3F6-2|KCTD10	37.81151784470057	0.4459294069877048	5				NaN	NaN	0	NaN	5963	3790	9753
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9767	29.147	NaN	4287	30	0	602.71	0.143	+			20669	KGLSTQLLEG	10	66	523.2993477728129	1044.5841426124257	2	523.2986450195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KGLSTQLLEG_	nc|ENSG00000188878|Q8TES7-4|FBF1	51.19269402634007	0.44601001148513897	5				NaN	NaN	0	NaN	5972	3793	9766
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9779	29.175	NaN	6701.1	30	0	2214.6	0.214				-1	 	0	63	496.76270947326157	991.5108660133232	2	496.76190185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5981	3796	9778
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9780	29.178	NaN	4576.4	30	0	702.8	0.106	+			25716	LRPWKKHS	8	57	526.3122011263346	1050.609849319469	2	526.3117065429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LRPWKKHS_	ENSG00000182636|ENST00000649030|NDN;NDN|p.G229W|1|0.22|ENSG00000182636|chr15:23686533-23686533|C/A|missense_variant	60.97194046774394	0.49215940876911696	5				NaN	NaN	0	NaN	5982	3796	9778
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9781	29.18	NaN	1596.8	30	0	188.49	0.106			+	35051	SAEQASDASY	10	57	514.7122101053942	1027.4098672775883	2	514.7113647460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAEQASDASY_	REV__ENSG00000152217|ENST00000649279|SETBP1;REV__SETBP1|p.F1174Lfs*13|1|0.35|ENSG00000152217|chr18:44952858-44952858|T/-|frameshift_variant;REV__SETBP1|p.G1249Efs*3|1|0.36|ENSG00000152217|chr18:44953080-44953080|A/-|frameshift_variant;REV__SETBP1|p.R421Dfs*23|1|0.18|ENSG00000152217|chr18:44950595-44950595|A/-|frameshift_variant	35.15202426646627	0.5927656479315102	5				NaN	NaN	0	NaN	5983	3796	9778
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9782	29.182	NaN	2699.2	30	0	288.82	0.106			+	29236	NWAKGLAEM	9	52	518.2496470561975	1034.484741179195	2	518.2484741210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_NWAKGLAEM(Oxidation (M))_	REV__CAMSAP3|p.E835Rfs*154|1|0.18|ENSG00000076826|chr19:7612990-7612990|C/-|frameshift_variant;REV__CAMSAP3|p.P438Rfs*125|1|0.39|ENSG00000076826|chr19:7611801-7611801|C/-|frameshift_variant;REV__CAMSAP3|p.V883Gfs*10|1|0.45|ENSG00000076826|chr19:7613137-7613138|-/G|frameshift_variant;REV__ENSG00000076826|ENST00000160298|CAMSAP3;REV__nc|ENSG00000076826|Q9P1Y5-2|CAMSAP3	60.97194046774394	0.20551255781574032	5				NaN	NaN	0	NaN	5984	3796	9778
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9783	29.184	NaN	2307.1	30	0	197.94	0.106	+			27269	MFGFTHSFLL	10	52	600.3002589175928	1198.5859649019856	2	600.2987670898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MFGFTHSFLL_	ENSG00000171936|ENST00000641646|OR10H3;ENSG00000176231|ENST00000322107|OR10H4	31.954861631926434	0.6188749698950511	5				NaN	NaN	0	NaN	5985	3796	9778
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9784	29.186	NaN	2475.6	30	0	730.71	0.106	+			47553	VRCFRSSLQ	9	64	548.2891663309496	1094.563779728699	2	548.2875366210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VRCFRSSLQ_	ENST00000317633.13_2_5:70203783-70203822:+|nuORF	44.377184641726394	0.36891676396732553	5				NaN	NaN	0	NaN	5986	3796	9778
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9785	29.187	NaN	1107.6	30	0	73.981	0.038	+			29468	PCQEAQPCRAL	11	57	608.2834515943871	1214.552350255574	2	608.281982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PCQEAQPCRAL_	ENST00000486828.6_1_5:176910647-176917003:-|nuORF	35.15202426646627	0.6210751305041943	5				NaN	NaN	0	NaN	5987	3796	9778
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9799	29.217	NaN	8565.2	30	0	1470.2	0.214				-1	 	0	53	422.71452854265766	843.4145041521153	2	422.7136535644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	5998	3799	9798
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9800	29.22	NaN	6715	30	0	1425.8	0.106	+			48219	VTATQLIQK	9	75	501.3040685648809	1000.5935841965618	2	501.3033142089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTATQLIQK_	ENSG00000198589|ENST00000651943|LRBA;LRBA|p.L2590*|1|0.41|ENSG00000198589|chr4:150310342-150310342|A/-|frameshift_variant;LRBA|p.T2011Qfs*11|1|0.19|ENSG00000198589|chr4:150599022-150599022|T/-|frameshift_variant;nc|ENSG00000198589|P50851-2|LRBA;nc|ENSG00000198589|P50851|LRBA	132.757866228626	0.013877640931359021	5				NaN	NaN	0	NaN	5999	3799	9798
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9801	29.222	NaN	7317.7	30	0	1089.4	0.106				-1	 	0	73	544.3282912868151	1086.64202964043	2	544.3279418945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6000	3799	9798
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9802	29.224	NaN	4741.8	30	0	967.87	0.106	+			14789	GTLASSFAR	9	53	455.2437073762205	908.4728618192411	2	455.24322509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTLASSFAR_	ENST00000563117.5_1_16:20817227-20817782:-|nuORF;ENST00000565884.5_1_16:20817227-20817407:-|nuORF	101.25262130126117	0.03792372629710479	5				NaN	NaN	0	NaN	6001	3799	9798
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9803	29.226	NaN	3522.8	30	0	657.04	0.106	+			1237	AERGLGSFVV	10	66	517.7852839963975	1033.556015059595	2	517.7859497070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AERGLGSFVV_	ENST00000425389.2_1_7:150070026-150070173:+|nuORF;REPIN1|p.S373Pfs*242|1|0.28|ENSG00000214022|chr7:150372350-150372350|C/-|frameshift_variant	51.52775601994872	0.4429225830406686	5				NaN	NaN	0	NaN	6002	3799	9798
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9804	29.228	NaN	1863.2	30	0	222.38	0.034	+			16929	HPMGGLNAM	9	41	464.2131772756874	926.4118016181749	2	464.21246337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HPMGGLNAM_	ENSG00000149187|ENST00000687097|CELF1;nc|ENSG00000149187|Q92879-2|CELF1;nc|ENSG00000149187|Q92879-3|CELF1;nc|ENSG00000149187|Q92879-4|CELF1;nc|ENSG00000149187|Q92879-5|CELF1;nc|ENSG00000149187|Q92879-6|CELF1;nc|ENSG00000149187|Q92879|CELF1	26.79610172149135	0.5528238334041078	5				NaN	NaN	0	NaN	6003	3799	9798
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9805	29.228	NaN	2753.3	30	0	480.84	0.142	+			36142	SEKSLENETL	10	62	575.2868455283893	1148.5591381235786	2	575.2860717773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SEKSLENETL_	ENSG00000063046|ENST00000262056|EIF4B;nc|ENSG00000063046|P23588-2|EIF4B	104.42354056486148	0.06456012287859861	5				NaN	NaN	0	NaN	6004	3799	9798
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9821	29.263	NaN	21517	30	0	3714.3	0.214	+			7107	CYLSCVQVF	9	81	531.2441217113121	1060.4736904894241	2	531.2431030273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CYLSCVQVF_	L1PA5_dup2765|chr4:69723015-69726028:+|1.903650506224423|0.171219590839865|3.47|472.0|87|1|anti-sense	82.30502934623384	0.08758161712619916	5				NaN	NaN	0	NaN	6017	3802	9820
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9822	29.267	NaN	26249	30	0	4240.8	0.106	+			3828	ATAIGMPVEK	10	80	508.7765369649976	1015.5385209967952	2	508.7757873535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATAIGMPVEK_	ENSG00000109736|ENST00000355443|MFSD10;ENST00000509676.1_1_4:2934766-2935650:-|nuORF;MFSD10|p.S111Gfs*48|1|0.44|ENSG00000109736|chr4:2933125-2933147|GGGCGCCTCCCCAAGCAGTCAGA/-|frameshift_variant	99.01295224348159	0.08062808246117298	5				NaN	NaN	0	NaN	6018	3802	9820
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9823	29.269	NaN	4846.3	30	0	919.99	0.106			+	8312	EAISTHNAL	9	62	478.2467311198688	954.4789093065376	2	478.24542236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EAISTHNAL_	REV__ENSG00000139719|ENST00000267199|VPS33A;REV__VPS33A|p.F371Lfs*4|1|0.18|ENSG00000139719|chr12:122239929-122239929|A/-|frameshift_variant;REV__VPS33A|p.G459Afs*86|7|0.14|ENSG00000139719|chr12:122235850-122235850|C/-|frameshift_variant;REV__VPS33A|p.G552Afs*2|1|0.26|ENSG00000139719|chr12:122232382-122232382|C/-|frameshift_variant;REV__VPS33A|p.R460Qfs*17|2|0.28|ENSG00000139719|chr12:122235849-122235850|-/C|frameshift_variant	53.351449002276354	0.2690372970092375	5				NaN	NaN	0	NaN	6019	3802	9820
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9824	29.271	NaN	10620	30	0	6809.9	0.106			+	48437	VTKLNPFLVG	10	49	363.22125492062065	1086.641935362062	3	363.2203063964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTKLNPFLVG_	REV__ENSG00000169594|ENST00000345382|BNC1	24.20275056022122	0.6821818413321409	5				NaN	NaN	0	NaN	6020	3802	9820
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9825	29.272	NaN	3583.6	30	0	819.4	0.106			+	37704	SLSPWKLA	8	58	451.25976320745696	900.5049734817139	2	451.25836181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SLSPWKLA_	REV__ENST00000602662.1_3_1:19984160-19984526:+|nuORF	73.97473282117947	0.3737790450121076	5				NaN	NaN	0	NaN	6021	3802	9820
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9826	29.274	NaN	2400.8	30	0	508.94	0.106	+			36570	SFSKAMASL	9	61	471.2423254805752	940.4700980279504	2	471.2409973144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SFSKAMASL_	ENSG00000173230|ENST00000614479|GOLGB1;nc|ENSG00000173230|Q14789-2|GOLGB1;nc|ENSG00000173230|Q14789-3|GOLGB1;nc|ENSG00000173230|Q14789-4|GOLGB1;nc|ENSG00000173230|Q14789|GOLGB1	34.172542307311794	0.4838870758800184	5				NaN	NaN	0	NaN	6022	3802	9820
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9827	29.276	NaN	3125.5	30	0	1088.4	0.033	+			25587	LQGWGLSL	8	54	437.24421790542146	872.473882877643	2	437.2425537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LQGWGLSL_	ENST00000258991.7_1_17:62225146-62225452:-|nuORF	90.77665401227738	0.27511901818546464	5				NaN	NaN	0	NaN	6023	3802	9820
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9840	29.303	NaN	27871	30	0	2661.9	0.214	+			1625	AGMALGIQK	9	88	444.75301390177316	887.4914748703463	2	444.7519836425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AGMALGIQK_	ENSG00000174851|ENST00000376901|YIF1A	133.4690685054315	0.013543987435668854	5				NaN	NaN	0	NaN	6033	3805	9839
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9841	29.307	NaN	3570.2	30	0	477.84	0.106				-1	VMCVIPATI	9	58	502.2700302628151	1002.5255075924302	2	502.26898193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_VMC(Carbamidomethyl (C))VIPATI_	ENSG00000141959|ENST00000349048|PFKL;ENST00000397961.6_1_21:45725201-45746742:+|nuORF;ENST00000460521.5_1_21:45741509-45746742:+|nuORF;ENST00000466134.5_1_21:45739892-45745863:+|nuORF;ENST00000467315.5_1_21:45739892-45746742:+|nuORF;ENST00000474114.5_1_21:45741509-45744801:+|nuORF;ENST00000495274.1_1_21:45742848-45745285:+|nuORF;ENST00000498841.5_1_21:45739892-45744801:+|nuORF;nc|ENSG00000141959|P17858-2|PFKL;PFKL|p.P704Qfs*6|1|0.29|ENSG00000141959|chr21:44326177-44326177|C/-|frameshift_variant	33.51558372728122	0.4900267029546261	5				NaN	NaN	0	NaN	6034	3805	9839
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9842	29.309	NaN	2556.8	30	0	303.6	0.106			+	24321	LFHVEPAF	8	63	480.2520657583729	958.4895785835458	2	480.2501525878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LFHVEPAF_	REV__ENST00000376561.7_1_11:70281793-70282567:+|nuORF	42.47446043378293	0.6409579893742323	5				NaN	NaN	0	NaN	6035	3805	9839
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9843	29.311	NaN	1544.1	30	0	208.13	0.106			+	2955	ASEPAQSDI	9	49	459.21258225826887	NaN	0	459.2122497558594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASEPAQSDI_	REV__ENST00000508761.1_1_5:11903293-11903473:-|nuORF	51.33545320467046	0.19748963086191895	5				NaN	NaN	0	NaN	6036	3805	9839
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9844	29.312	NaN	2283.8	30	0	228.7	0.106				-1	LECLIQEQ	8	63	516.7561007169788	1031.4976485007576	2	516.7549438476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_LEC(Carbamidomethyl (C))LIQEQ_	ADD3-MXI1|1|fusion;ENSG00000148700|ENST00000356080|ADD3;ENST00000475954.5_1_10:111860411-111877110:+|nuORF;nc|ENSG00000148700|Q9UEY8-2|ADD3	63.30626980617807	0.4690498839812213	5				NaN	NaN	0	NaN	6037	3805	9839
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9845	29.314	NaN	2786.1	30	0	799.55	0.034			+	8458	EASAKQLNS	9	56	474.2442934193911	946.4740339055822	2	474.24322509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EASAKQLNS_	REV__ENSG00000152672|ENST00000272367|CLEC4F;REV__nc|ENSG00000152672|Q8N1N0-2|CLEC4F	49.536043120802724	0.308405419312776	5				NaN	NaN	0	NaN	6038	3805	9839
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9846	29.315	NaN	1633.8	30	0	167.51	0.143			+	20614	KGDKEFNYTT	10	59	601.7891274817147	1201.5637020302293	2	601.7877197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KGDKEFNYTT_	REV__ENSG00000087245|ENST00000219070|MMP2;REV__MMP2|p.C349Vfs*72|1|0.45|ENSG00000087245|chr16:55489684-55489684|C/-|frameshift_variant;REV__nc|ENSG00000087245|P08253-2|MMP2;REV__nc|ENSG00000087245|P08253-3|MMP2	77.31757898189308	0.2175361111083648	5				NaN	NaN	0	NaN	6039	3805	9839
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9859	29.344	NaN	4205.9	30	0	605.54	0.214				-1	 	0	69	504.3171577940212	1006.6197626548425	2	504.3160705566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6049	3808	9858
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9860	29.347	NaN	3416.4	30	0	890.24	0.106				-1	 	0	56	468.7149092536984	935.4152655741968	2	468.7137145996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6050	3808	9858
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9861	29.349	NaN	3139.4	30	0	435.22	0.106			+	-1	MRGVLDTEY	9	60	550.2578435258201	1098.5011341184402	2	550.2572021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))RGVLDTEY_	REV__tr|U7SN94|U7SN94_FUSNULysozymeinhibitorLprIN-terminaldomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01758PE=4SV=1	47.657333605630114	0.33044192980041115	5				NaN	NaN	0	NaN	6051	3808	9858
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9862	29.351	NaN	3690	30	0	402.72	0.106	+			42779	TEAETIQKL	9	74	516.7831155205713	1031.5516781079425	2	516.7824096679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TEAETIQKL_	ENSG00000138768|ENST00000514213|USO1;nc|ENSG00000138768|O60763-2|USO1;USO1|p.I920Sfs*9|1|0.08|ENSG00000138768|chr4:75812332-75812333|-/GAGCTTT|frameshift_variant;USO1|p.K251*|2|0.26|ENSG00000138768|chr4:75782746-75782747|-/T|frameshift_variant;USO1|p.K919Tfs*8|1|0.08|ENSG00000138768|chr4:75812331-75812332|-/C|frameshift_variant	112.41091882917199	0.026537921851008135	5				NaN	NaN	0	NaN	6052	3808	9858
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9863	29.353	NaN	2061.8	30	0	173.07	0.106	+			11550	FPILDHFA	8	56	480.2520657583729	958.4895785835458	2	480.25067138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FPILDHFA_	ENSG00000164715|ENST00000297293|LMTK2;LMTK2|p.F540Lfs*16|1|0.31|ENSG00000164715|chr7:98192081-98192081|T/-|frameshift_variant	39.021493756699265	0.6623843612266921	5				NaN	NaN	0	NaN	6053	3808	9858
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9864	29.355	NaN	2178.7	30	0	234.38	0.035	+			14923	GTMAMTVVTK	10	61	519.7711173319675	1037.527681730735	2	519.7697143554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTMAMTVVTK_	ENSG00000175115|ENST00000320580|PACS1;nc|ENSG00000175115|Q6VY07-2|PACS1	79.48907831485694	0.19979514868675113	5				NaN	NaN	0	NaN	6054	3808	9858
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9865	29.355	NaN	1308.5	30	0	131.96	0.141	+			49621	VYHHLVETL	9	49	555.8015267396606	1109.5885005461212	2	555.8013305664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VYHHLVETL_	ENSG00000099998|ENST00000327365|GGT5;nc|ENSG00000099998|P36269-2|GGT5;nc|ENSG00000099998|P36269-3|GGT5	33.51558372728122	0.4900267029546261	5				NaN	NaN	0	NaN	6055	3808	9858
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9877	29.383	NaN	2091.6	30	0	668.47	0.214				-1	 	0	46	430.74094306179427	859.4673331903886	2	430.7398681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6064	3811	9876
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9878	29.387	NaN	4399.9	30	0	947.5	0.106				-1	 	0	74	601.2790142199013	1200.5434755066026	2	601.2780151367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6065	3811	9876
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9879	29.389	NaN	3406.4	30	0	368.55	0.106			+	23494	LAGDCGADSLE	11	61	525.7232586707589	1049.4319644083178	2	525.7228393554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LAGDCGADSLE_	REV__REPS2|p.D330G|1|0.59|ENSG00000169891|chrX:17054825-17054825|A/G|missense_variant	45.97224482568171	0.4762245054624163	5				NaN	NaN	0	NaN	6066	3811	9876
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9880	29.391	NaN	2353.6	30	0	475.85	0.106	+			3227	ASLAGLHALR	10	36	336.86860928035003	NaN	0	336.8686828613281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASLAGLHALR_	ENSG00000239732|ENST00000360658|TLR9;nc|ENSG00000239732|Q9NR96-2|TLR9;nc|ENSG00000239732|Q9NR96-3|TLR9;nc|ENSG00000239732|Q9NR96-4|TLR9;nc|ENSG00000239732|Q9NR96-5|TLR9;TLR9|p.G719Afs*37|1|0.18|ENSG00000239732|chr3:52222162-52222162|G/-|frameshift_variant	16.71738777980365	0.4201028297492154	5				NaN	NaN	0	NaN	6067	3811	9876
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9881	29.393	NaN	2118.2	30	0	728.87	0.106	+			29985	PPERQIVVG	9	37	332.19483689276547	993.5626812784965	3	332.1940612792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PPERQIVVG_	ENSG00000145725|ENST00000358359|PPIP5K2;nc|ENSG00000145725|O43314-2|PPIP5K2;PPIP5K2|p.L906Cfs*40|1|0.19|ENSG00000145725|chr5:103177941-103177941|T/-|frameshift_variant;PPIP5K2|p.V1179Yfs*3|2|0.15|ENSG00000145725|chr5:103194934-103194934|A/-|frameshift_variant	28.2542754592877	0.5391964248700117	5				NaN	NaN	0	NaN	6068	3811	9876
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9882	29.394	NaN	1590.2	30	0	154.72	0.106	+			37302	SLDARSAFV	9	51	483.25628662109375	NaN	0	483.25628662109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLDARSAFV_	sp|F5HDQ6|DNBI_HCMVMMajorDNA-bindingproteinOS=Humancytomegalovirus(strainMerlin)OX=295027GN=DBPPE=3SV=1;sp|P17147|DNBI_HCMVAMajorDNA-bindingproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=DBPPE=1SV=1	39.252832667884924	0.27938773122138094	5				NaN	NaN	0	NaN	6069	3811	9876
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9883	29.396	NaN	2134.2	30	0	1141	0.031				-1	 	0	46	343.2177960588952	684.4210391845904	2	343.21685791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6070	3811	9876
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9894	29.42	NaN	3762.2	30	0	582.54	0.215				-1	 	0	63	469.2356972982155	936.456841663231	2	469.23480224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6078	3814	9893
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9895	29.423	NaN	2564.6	30	0	615.47	0.106	+			19885	KEESQQMVL	9	57	546.2750078922223	1090.5354628512446	2	546.2744750976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEESQQMVL_	ENSG00000107581|ENST00000369144|EIF3A;nc|ENSG00000107581|Q14152-2|EIF3A	44.377184641726394	0.36891676396732553	5				NaN	NaN	0	NaN	6079	3814	9893
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9896	29.425	NaN	4363.4	30	0	355.67	0.106			+	22106	KSNCSSLSMGF	11	71	580.7581103849876	1159.5016678367751	2	581.259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KSNCSSLSMGF_	REV__ENST00000580335.1_1_18:67624287-67624371:-|nuORF	63.53385203322761	0.2919106290768168	5				NaN	NaN	0	NaN	6080	3814	9893
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9897	29.427	NaN	1117.7	30	0	120.57	0.106	+			24707	LHGHLNTL	8	55	452.7530212402344	NaN	0	452.7530212402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LHGHLNTL_	ENSG00000182208|ENST00000329957|MOB2;nc|ENSG00000182208|Q70IA6|MOB2	50.0245360154114	1.7418937515398478	5				NaN	NaN	0	NaN	6081	3814	9893
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9898	29.429	NaN	1891.2	30	0	224.55	0.106				-1	 	0	49	407.7378951376077	813.4612373420155	2	407.73681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6082	3814	9893
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9899	29.431	NaN	1605.2	30	0	342.87	0.106			+	25176	LLYAYRYR	8	36	373.21042742456353	1116.6094528738906	3	373.2101135253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LLYAYRYR_	REV__C8B|p.K161Nfs*19|1|0.34|ENSG00000021852|chr1:56954736-56954736|T/-|frameshift_variant;REV__ENSG00000021852|ENST00000371237|C8B	21.70233525837049	0.7917639344264583	5				NaN	NaN	0	NaN	6083	3814	9893
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9900	29.433	NaN	1824.5	30	0	219.4	0.038	+			33712	RPFEQPQEY	9	65	597.2840543104061	1192.553555687612	2	597.2832641601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RPFEQPQEY_	ENSG00000114446|ENST00000264538|IFT57;ENST00000465024.1_1_3:107932768-107941190:-|nuORF;ENST00000485979.1_1_3:107937380-107938376:-|nuORF;IFT57|p.K357Nfs*11|1|0.32|ENSG00000114446|chr3:108163703-108163703|T/-|frameshift_variant;IFT57|p.L380Sfs*4|1|0.03|ENSG00000114446|chr3:108162629-108162630|-/AACATACT|frameshift_variant	35.15202426646627	0.4747332964206883	5				NaN	NaN	0	NaN	6084	3814	9893
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9916	29.466	NaN	33095	30	0	3137.9	0.213				-1	 	0	94	616.8364073867706	1231.658261840341	2	616.835205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6097	3817	9915
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9917	29.469	NaN	10063	30	0	1088	0.106			+	30674	QCAATSMSLCK	11	72	381.50423832118213	1141.4908855637464	3	381.5033874511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QCAATSMSLCK_	REV__ENST00000558265.5_2_14:103800742-103802258:+|nuORF;REV__ENST00000558506.1_1_14:103801937-103802258:+|nuORF;REV__ENST00000560763.5_2_14:103800597-103802258:+|nuORF	55.721020083383095	0.36165090524447163	5				NaN	NaN	0	NaN	6098	3817	9915
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9918	29.471	NaN	2862.8	30	0	1012.1	0.106	+			10618	EYNINDKKI	9	70	568.8017225206034	1135.5888921080068	2	568.8012084960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EYNINDKKI_	tr|U7ST45|U7ST45_FUSNUOrganicsolventtolerance-likeN-terminaldomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01283PE=4SV=1	66.42927471994793	0.16001998865088202	5				NaN	NaN	0	NaN	6099	3817	9915
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9919	29.473	NaN	2053.5	30	0	327.37	0.106				-1	TPEDCRKAFQ	10	61	626.2925969353943	1250.5706409375885	2	626.2914428710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_TPEDC(Carbamidomethyl (C))RKAFQ_	ENSG00000121621|ENST00000263181|KIF18A	31.529811441608018	0.6223461015008678	5				NaN	NaN	0	NaN	6100	3817	9915
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9920	29.475	NaN	1926.6	30	0	200.69	0.106	+			17363	IALLLTEFY	9	64	541.8099662798913	NaN	0	541.8096313476562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IALLLTEFY_	ENSG00000255223|ENST00000528616|OR5M11	52.29916861842294	0.1908481487866478	5				NaN	NaN	0	NaN	6101	3817	9915
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9921	29.477	NaN	2577.1	30	0	441.96	0.034	+			33562	RLGDSSGPAL	10	57	486.7601999698693	971.5058470065386	2	486.7589416503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RLGDSSGPAL_	ENSG00000184640|ENST00000427177|SEPTIN9	44.377184641726394	0.5088115166961078	5				NaN	NaN	0	NaN	6102	3817	9915
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9922	29.477	NaN	5380.5	30	0	791.72	0.14	+			42530	TAQVLAVASKG	11	64	522.8068078717971	1043.5990628103941	2	522.8057861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TAQVLAVASKG_	ENST00000536682.1_19:35167898-35168335:-|nuORF	37.50817390946774	0.5920388381045607	5				NaN	NaN	0	NaN	6103	3817	9915
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9935	29.507	NaN	6004.7	30	0	662.38	0.214	+			7519	DGQRCRPR	8	75	522.7601425977633	1043.5057322623265	2	522.75927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_DGQRC(Carbamidomethyl (C))RPR_	ENST00000535977.5_1_16:678381-678519:+|nuORF	58.78195531508484	0.5138399468736706	5				NaN	NaN	0	NaN	6113	3820	9934
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9936	29.511	NaN	4624.8	30	0	559.53	0.106	+			14851	GTLMWHQMK	9	59	566.2764736269944	1130.5383943207887	2	566.27587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTLMWHQMK_	ENST00000346169.6_1_3:184032401-184033585:+|nuORF;ENST00000352767.7_2_3:184032446-184033585:+|nuORF	79.71258880314673	0.09879134589249085	5				NaN	NaN	0	NaN	6114	3820	9934
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9937	29.513	NaN	9144	30	0	4251.3	0.106	+			39866	STLPCMKQKG	10	44	364.8558020243822	1091.5455766733467	3	364.8548583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STLPCMKQKG_	RALGDS|p.R901C|1|0.35|ENSG00000160271|chr9:133098631-133098631|G/A|missense_variant	42.86426827375447	0.522752283233888	5				NaN	NaN	0	NaN	6115	3820	9934
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9938	29.514	NaN	4020	30	0	437.51	0.106	+			17018	HPTSVISGY	9	66	480.7449736357637	959.4753943383274	2	480.7427062988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HPTSVISGY_	ENSG00000120438|ENST00000321394|TCP1;ENST00000412860.1_1_7:42834686-42835559:+|nuORF;TCP1|p.A232Gfs*7|1|0.05|ENSG00000120438|chr6:159784043-159784044|-/C|frameshift_variant	63.30626980617807	0.18605348971131092	5				NaN	NaN	0	NaN	6116	3820	9934
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9939	29.516	NaN	3397.2	30	0	1727.4	0.106	+			48420	VTIQKQLLY	9	59	553.3350644673163	NaN	0	553.3349609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTIQKQLLY_	AMER1|p.E752*|1|0.4|ENSG00000184675|chrX:64191034-64191035|-/G|frameshift_variant;AMER1|p.G1103Vfs*36|1|0.05|ENSG00000184675|chrX:64189979-64189980|-/TATATATATATATATATATACACACA|frameshift_variant;ENSG00000184675|ENST00000374869|AMER1;nc|ENSG00000184675|Q5JTC6-2|AMER1	35.61828744233558	0.29773779453147337	5				NaN	NaN	0	NaN	6117	3820	9934
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9940	29.518	NaN	1821	30	0	226.12	0.106	+			20425	KETSYEEAL	9	51	535.2569700814062	1068.4993872296122	2	535.2564697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KETSYEEAL_	ENSG00000125844|ENST00000377813|RRBP1;nc|ENSG00000125844|Q9P2E9-3|RRBP1;RRBP1|p.A628Gfs*69|1|0.35|ENSG00000125844|chr20:17621915-17621916|-/T|frameshift_variant;RRBP1|p.N91Mfs*2|1|0.04|ENSG00000125844|chr20:17660238-17660238|G/-|frameshift_variant	60.11826168202944	0.21262886028301267	5				NaN	NaN	0	NaN	6118	3820	9934
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9941	29.52	NaN	2975.1	30	0	343.75	0.036	+			1436	AEYGPQGRAF	10	66	548.2663088168695	1094.5180647005388	2	548.26513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AEYGPQGRAF_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	62.107414245175825	0.3466735403679669	5				NaN	NaN	0	NaN	6119	3820	9934
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9952	29.544	NaN	3374.1	30	0	294.34	0.214			+	19129	IYLWSLSL	8	60	497.782044860912	NaN	0	497.781982421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IYLWSLSL_	REV__ENSG00000130055|ENST00000374382|GDPD2;REV__GDPD2|p.M234Cfs*8|2|0.19|ENSG00000130055|chrX:70427004-70427004|C/-|frameshift_variant;REV__nc|ENSG00000130055|Q9HCC8-3|GDPD2	71.29570347882199	1.7418937515398478	5				NaN	NaN	0	NaN	6127	3823	9951
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9953	29.547	NaN	4146.2	30	0	998.57	0.106	+			2378	ANKKPMQL	8	55	465.26670249204153	928.5188520508831	2	465.26348876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ANKKPMQL_	ENSG00000155111|ENST00000368911|CDK19;nc|ENSG00000155111|Q9BWU1-2|CDK19	42.47446043378293	0.6409579893742323	5				NaN	NaN	0	NaN	6128	3823	9951
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9954	29.549	NaN	3230.4	30	0	199.6	0.106	+			17700	IELNQQNKL	9	63	550.310312098582	1098.606071263964	2	550.3092651367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IELNQQNKL_	ENSG00000134996|ENST00000346234|OSTF1;OSTF1|p.K191Rfs*11|1|0.32|ENSG00000134996|chr9:75140914-75140914|A/-|frameshift_variant	148.98678547993487	0.0071052929883181565	5				NaN	NaN	0	NaN	6129	3823	9951
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9955	29.551	NaN	2088.6	30	0	577.94	0.106	+			43249	TEWLDGKHV	9	49	362.1854475974052	NaN	0	362.1855163574219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TEWLDGKHV_	ENSG00000196262|ENST00000468812|PPIA;ENSG00000236334|ENST00000419275|PPIAL4G;ENSG00000263353|ENST00000577856|PPIAL4A;ENSG00000270339|ENST00000584068|PPIAL4H;ENSG00000271567|ENST00000581164|PPIAL4E;ENSG00000279782|ENST00000581138|PPIAL4F;ENST00000414143.1_1_20:25348913-25349114:-|nuORF;ENST00000420099.1_1_13:91924337-91924628:-|nuORF;ENST00000424692.3_1_4:124983938-124984139:+|nuORF;ENST00000450588.1_1_20:36158731-36158923:+|nuORF;ENST00000454070.2_1_1:101736433-101736811:-|nuORF;ENST00000462517.1_1_3:57927876-57927939:+|nuORF;ENST00000527147.1_1_11:100537243-100537690:+|nuORF;ENST00000557282.1_1_12:98984503-98984704:-|nuORF;ENST00000577627.1_1_18:5002795-5003119:-|nuORF;nc|ENSG00000196262|P62937-2|PPIA;nc|ENSG00000288867|A0A0B4J2A2|PPIAL4C;nc|ENSG00000289549|F5H284|PPIAL4D	32.81241826257853	0.3119040447479903	5				NaN	NaN	0	NaN	6130	3823	9951
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9956	29.553	NaN	1454.4	30	0	135.67	0.036	+			43250	TEWLDGKHV	9	57	542.7745344452949	NaN	0	542.7748413085938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TEWLDGKHV_	ENSG00000196262|ENST00000468812|PPIA;ENSG00000236334|ENST00000419275|PPIAL4G;ENSG00000263353|ENST00000577856|PPIAL4A;ENSG00000270339|ENST00000584068|PPIAL4H;ENSG00000271567|ENST00000581164|PPIAL4E;ENSG00000279782|ENST00000581138|PPIAL4F;ENST00000414143.1_1_20:25348913-25349114:-|nuORF;ENST00000420099.1_1_13:91924337-91924628:-|nuORF;ENST00000424692.3_1_4:124983938-124984139:+|nuORF;ENST00000450588.1_1_20:36158731-36158923:+|nuORF;ENST00000454070.2_1_1:101736433-101736811:-|nuORF;ENST00000462517.1_1_3:57927876-57927939:+|nuORF;ENST00000527147.1_1_11:100537243-100537690:+|nuORF;ENST00000557282.1_1_12:98984503-98984704:-|nuORF;ENST00000577627.1_1_18:5002795-5003119:-|nuORF;nc|ENSG00000196262|P62937-2|PPIA;nc|ENSG00000288867|A0A0B4J2A2|PPIAL4C;nc|ENSG00000289549|F5H284|PPIAL4D	54.722347961057174	0.17414871455573902	5				NaN	NaN	0	NaN	6131	3823	9951
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9969	29.581	NaN	12739	30	0	4890.3	0.214	+			13992	GSDEDYIDED	10	73	579.2107762211131	1156.406999509026	2	579.2098388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSDEDYIDED_	ENST00000442031.1_1_X:51665090-51665543:-|nuORF	58.78195531508484	0.37691818691852547	5				NaN	NaN	0	NaN	6141	3826	9968
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9970	29.584	NaN	4292.3	30	0	447.58	0.106				-1	LSLAMNTWA	9	72	511.7523733851201	1021.4901938370402	2	511.7511291503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LSLAM(Oxidation (M))NTWA_	ENSG00000158296|ENST00000279027|SLC13A3;nc|ENSG00000158296|Q8WWT9-3|SLC13A3;nc|ENSG00000158296|Q8WWT9-5|SLC13A3;nc|ENSG00000158296|Q8WWT9-6|SLC13A3	56.72105179125745	0.24094814563026265	5				NaN	NaN	0	NaN	6142	3826	9968
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9971	29.586	NaN	3822.4	30	0	898.7	0.106	+			48181	VTADGALAMEK	11	74	553.282414658287	1104.550276383374	2	553.2821655273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTADGALAMEK_	ENSG00000058085|ENST00000264144|LAMC2;nc|ENSG00000058085|Q13753-2|LAMC2	84.31045756130733	0.12206600909821903	5				NaN	NaN	0	NaN	6143	3826	9968
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9972	29.588	NaN	3991.4	30	0	1534.3	0.106	+			27020	LYSGKQLQ	8	54	468.7617064231735	935.508859913147	2	468.76043701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LYSGKQLQ_	ENST00000369170.4_1_10:120101412-120101460:-|nuORF	52.29916861842294	0.578018602984656	5				NaN	NaN	0	NaN	6144	3826	9968
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9973	29.59	NaN	16611	30	0	6381.5	0.106				-1	 	0	65	526.7914328196556	1051.568312706111	2	526.7911376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6145	3826	9968
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9974	29.592	NaN	3270.8	30	0	347.83	0.106			+	30376	PVMGRDQL	8	51	458.2387262676702	914.4628996021404	2	458.7392272949219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PVMGRDQL_	REV__ENSG00000132801|ENST00000255152|ZSWIM3	38.80614096846853	0.6637206697844082	5				NaN	NaN	0	NaN	6146	3826	9968
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9975	29.593	NaN	2202.9	30	0	343.97	0.035				-1	DKGMAIGVGGA	11	62	496.24671103323755	990.4788691332751	2	496.2459411621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_DKGM(Oxidation (M))AIGVGGA_	ENSG00000153531|ENST00000612156|ADPRHL1	51.33545320467046	0.40283943988558196	5				NaN	NaN	0	NaN	6147	3826	9968
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9988	29.621	NaN	4251.5	30	0	754.45	0.214	+			38469	SSASALTGLTK	11	69	518.2884311944663	1034.5623094557325	2	518.2876586914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSASALTGLTK_	ENSG00000164880|ENST00000404767|INTS1;INTS1|p.Q467Afs*140|1|0.05|ENSG00000164880|chr7:1498439-1498440|-/A|frameshift_variant;INTS1|p.R843Pfs*31|1|0.39|ENSG00000164880|chr7:1487438-1487439|-/G|frameshift_variant	94.4091291819064	0.0807249280027251	5				NaN	NaN	0	NaN	6157	3829	9987
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9989	29.625	NaN	2506.3	30	0	308.71	0.106				-1	 	0	52	440.251285542817	878.488018152434	2	440.2499694824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6158	3829	9987
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9990	29.627	NaN	2903.7	30	0	582.93	0.106				-1	 	0	56	430.2670921994172	858.5196314656345	2	430.26568603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6159	3829	9987
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9991	29.629	NaN	1908.5	30	0	249.48	0.106				-1	 	0	58	485.78322448525466	969.5518960373093	2	485.7814636230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6160	3829	9987
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9992	29.63	NaN	1871.8	30	0	168.55	0.106	+			33218	RFKTQPVTF	9	60	562.3167134412389	1122.6188739492777	2	562.3165283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RFKTQPVTF_	ENSG00000187479|ENST00000617612|C11orf96;nc|nan|Q7Z7L8|C11orf96	42.396135135203025	0.392153681582562	5				NaN	NaN	0	NaN	6161	3829	9987
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9993	29.632	NaN	881.4	30	0	101.45	0.106			+	10299	ETPPGLPR	8	37	433.74099743999466	865.4674419467893	2	433.7397766113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ETPPGLPR_	REV__ENSG00000116962|ENST00000264187|NID1;REV__nc|ENSG00000116962|P14543-2|NID1	25.450171626174864	0.7628259754767981	5				NaN	NaN	0	NaN	6162	3829	9987
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	9994	29.634	NaN	1550.9	30	0	301.92	0.033			+	23733	LAWSASQK	8	55	445.74087308025923	889.4671932273185	2	445.739990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LAWSASQK_	REV__ENSG00000163728|ENST00000296015|TTC14;REV__ENST00000465065.5_1_3:180323515-180323665:+|nuORF;REV__nc|ENSG00000163728|Q96N46-2|TTC14;REV__nc|ENSG00000163728|Q96N46-3|TTC14;REV__TTC14|p.D534Gfs*2|1|0.04|ENSG00000163728|chr3:180609828-180609829|-/G|frameshift_variant	37.15910966729921	0.6739408393984688	5				NaN	NaN	0	NaN	6163	3829	9987
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10006	29.659	NaN	16959	30	0	4176.3	0.214				-1	 	0	73	493.7679465220616	985.5213401109232	2	493.7667236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6172	3832	10005
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10007	29.663	NaN	1962.1	30	0	519.09	0.106			+	-1	VTPNLNKVM	9	54	516.2808743237723	1030.5471957143445	2	516.2796630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_VTPNLNKVM(Oxidation (M))_	REV__tr|U7T138|U7T138_FUSNUP-typeconjugativetransferproteinTrbLOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00885PE=4SV=1	53.351449002276354	0.2690372970092375	5				NaN	NaN	0	NaN	6173	3832	10005
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10008	29.665	NaN	2712	30	0	1842.1	0.106			+	311	AAPPHGVAL	9	40	416.73817267965086	831.4617924261017	2	416.7373352050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AAPPHGVAL_	REV__ENST00000297303.4_1_8:11052685-11058303:-|nuORF;REV__ENST00000529336.1_1_8:10971599-11058129:-|nuORF	29.841539824830324	0.5243625958137083	5				NaN	NaN	0	NaN	6174	3832	10005
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10009	29.667	NaN	1520.8	30	0	280.19	0.106	+			29779	PIHQLSSTI	9	55	498.28159961065506	994.5486462881101	2	498.7774963378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PIHQLSSTI_	CTNND2|p.D443Tfs*113|1|0.35|ENSG00000169862|chr5:11364741-11364741|C/-|frameshift_variant;ENSG00000169862|ENST00000304623|CTNND2;ENST00000507430.1_1_5:11364802-11385035:-|nuORF;nc|ENSG00000169862|Q9UQB3-2|CTNND2	29.14955571784316	0.5308295550522326	5				NaN	NaN	0	NaN	6175	3832	10005
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10010	29.669	NaN	1424.7	30	0	410.84	0.106	+			38291	SQRCSRHRRV	10	44	642.844029785303	1283.6735066374058	2	642.8427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SQRCSRHRRV_	CACNA1E|p.R920C|1|0.12|ENSG00000198216|chr1:181732844-181732844|C/T|missense_variant	20.94693142431847	0.7087701759873708	5				NaN	NaN	0	NaN	6176	3832	10005
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10011	29.67	NaN	1234.5	30	0	161.91	0.106			+	-1	LIYSAMSYL	9	38	359.5163269042969	NaN	0	359.5163269042969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_LIYSAM(Oxidation (M))SYL_	REV__ENSG00000165899|ENST00000547103|OTOGL;REV__OTOGL|p.C2147Mfs*2|1|0.4|ENSG00000165899|chr12:80367723-80367724|-/A|frameshift_variant;REV__OTOGL|p.K2146Nfs*40|2|0.16|ENSG00000165899|chr12:80367724-80367724|A/-|frameshift_variant	21.9598887501803	0.3626577482100488	5				NaN	NaN	0	NaN	6177	3832	10005
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10012	29.672	NaN	1192.5	30	0	231.32	0.035	+			6994	CREKISEL	8	41	489.2575637362077	976.5005745392154	2	489.2559814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_CREKISEL_	ENSG00000163491|ENST00000691995|NEK10;nc|ENSG00000163491|Q6ZWH5-2|NEK10;nc|ENSG00000163491|Q6ZWH5-4|NEK10;nc|ENSG00000163491|Q6ZWH5|NEK10;NEK10|p.I421Dfs*6|1|0.03|ENSG00000163491|chr3:27295660-27295661|-/GATC|frameshift_variant;NEK10|p.L420Sfs*2|1|0.03|ENSG00000163491|chr3:27295662-27295663|-/TG|frameshift_variant	35.61828744233558	0.6843154725607303	5				NaN	NaN	0	NaN	6178	3832	10005
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10026	29.701	NaN	2727.3	30	0	610.32	0.214			+	50970	YIIVSAVAEG	10	61	511.28214517486185	NaN	0	511.28271484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YIIVSAVAEG_	REV__CELSR2|p.P2879Lfs*14|1|0.28|ENSG00000143126|chr1:109273557-109273557|C/-|frameshift_variant;REV__CELSR2|p.R2253C|1|0.29|ENSG00000143126|chr1:109269235-109269235|C/T|missense_variant;REV__ENSG00000143126|ENST00000271332|CELSR2	51.33545320467046	0.297159550775418	5				NaN	NaN	0	NaN	6189	3835	10025
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10027	29.705	NaN	1602.2	30	0	202.32	0.106			+	29942	PMPRPPMLPF	10	63	591.8127034054712	1181.6108538777423	2	591.81103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PMPRPPMLPF_	REV__ENSG00000156304|ENST00000286835|SCAF4;REV__nc|ENSG00000156304|O95104-2|SCAF4;REV__nc|ENSG00000156304|O95104-3|SCAF4;REV__SCAF4|p.V1113Cfs*7|1|0.22|ENSG00000156304|chr21:31671506-31671506|C/-|frameshift_variant	23.52269567125451	0.6877354443478558	5				NaN	NaN	0	NaN	6190	3835	10025
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10028	29.707	NaN	1799.6	30	0	326.04	0.106				-1	 	0	58	468.7149092536984	935.4152655741968	2	468.7135925292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6191	3835	10025
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10029	29.709	NaN	1526.4	30	0	684.63	0.106	+			39323	STAVAVLGSF	10	48	476.2604185996846	NaN	0	476.2603759765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STAVAVLGSF_	sp|Q6SVZ0|US16_HCMVMProteinUS16OS=Humancytomegalovirus(strainMerlin)OX=295027GN=US16PE=3SV=1	49.44154591367651	0.30913310806145605	5				NaN	NaN	0	NaN	6192	3835	10025
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10030	29.71	NaN	1374.5	30	0	275.46	0.039	+			47279	VMVMVNYIFF	10	51	631.8170030772617	1261.6194532213233	2	631.8148803710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VMVMVNYIFF_	CON__Q9N2I2	23.04248740728303	0.69165701907106	5				NaN	NaN	0	NaN	6193	3835	10025
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10040	29.732	NaN	1292.7	30	0	120.98	0.214			+	47625	VSALTVASSM	10	50	483.2538758307834	964.4931987283668	2	483.2516174316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSALTVASSM_	REV__ENST00000392325.8_1_17:80573457-80573544:-|nuORF	35.61828744233558	0.588957954432594	5				NaN	NaN	0	NaN	6200	3838	10039
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10041	29.736	NaN	1981.2	30	0	231.5	0.106				-1	RCSRGLALP	9	59	515.2849210324829	1028.5552891317657	2	515.2848510742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_RC(Carbamidomethyl (C))SRGLALP_	ENST00000230124.7_1_6:110064901-110064964:+|nuORF	33.51558372728122	0.4900267029546261	5				NaN	NaN	0	NaN	6201	3838	10039
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10042	29.738	NaN	1841.4	30	0	375.27	0.106	+			17071	HRHFVKAL	8	33	336.5348629037366	1006.5827593114099	3	336.5341491699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HRHFVKAL_	ENST00000427137.1_1_7:46039264-46039813:-|nuORF	8.822329726475273	0.7821568878176242	5				NaN	NaN	0	NaN	6202	3838	10039
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10043	29.74	NaN	1300.8	30	0	83.666	0.106				-1	LSLFGLCW	8	48	498.2514229348264	NaN	0	498.2533264160156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_LSLFGLC(Carbamidomethyl (C))W_	ENST00000341509.9_1_15:66840666-66842434:-|nuORF	28.2542754592877	1.7418937515398478	5				NaN	NaN	0	NaN	6203	3838	10039
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10044	29.741	NaN	2013.6	30	0	269.55	0.106				-1	 	0	57	554.777668506104	1107.5407840790078	2	554.7769775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6204	3838	10039
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10045	29.743	NaN	1332.6	30	0	154.58	0.037			+	-1	FSRMIAKMI	9	59	564.7970581054688	NaN	0	564.7970581054688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Oxidation (M)	_FSRM(Oxidation (M))IAKM(Oxidation (M))I_	REV__ENSG00000124207|ENST00000262982|CSE1L;REV__nc|ENSG00000124207|P55060-3|CSE1L;REV__nc|ENSG00000124207|P55060-4|CSE1L	44.116797842482775	0.2472372736944149	5				NaN	NaN	0	NaN	6205	3838	10039
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10046	29.744	NaN	1163.6	30	0	110.17	0.142	+			49470	VVYIQSSINK	10	59	575.8270874023438	NaN	0	575.8270874023438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VVYIQSSINK_	ENST00000477091.5_1_21:35445925-35497723:+|nuORF	44.377184641726394	0.34115073642966565	5				NaN	NaN	0	NaN	6206	3838	10039
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10058	29.771	NaN	3393	30	0	317.28	0.214				-1	 	0	64	496.81180509184054	991.6090572504811	2	496.8105773925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6215	3841	10057
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10059	29.775	NaN	2333.6	30	0	456.25	0.106			+	29040	NSVSLCYVI	9	61	499.25595998327367	996.4973670333474	2	499.2548522949219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NSVSLCYVI_	REV__ENST00000540779.1_1_12:122359430-122370014:+|nuORF;REV__nc|ENSG00000158023|Q8TBY9-3|CFAP251	71.87747018426188	0.13267044672804276	5				NaN	NaN	0	NaN	6216	3841	10057
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10060	29.777	NaN	1799.9	30	0	347.01	0.106	+			33822	RQTAGGCRP	9	52	473.2383505995405	944.4621482658811	2	473.237060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RQTAGGCRP_	ENST00000426250.3_1_12:72665645-72666709:-|nuORF	29.14955571784316	0.5308295550522326	5				NaN	NaN	0	NaN	6217	3841	10057
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10061	29.779	NaN	1003.9	30	0	109.05	0.106			+	-1	FQMTVPTLL	9	62	533.2831432161024	NaN	0	533.2823486328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_FQM(Oxidation (M))TVPTLL_	REV__ENSG00000187701|ENST00000460972|OR2T27;REV__nc|ENSG00000227152|P0C7T2|OR2T7	40.77816245573522	0.2702456086868081	5				NaN	NaN	0	NaN	6218	3841	10057
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10062	29.78	NaN	2947.3	30	0	1367.9	0.106				-1	 	0	62	480.28070308252364	958.5468532318473	2	480.27899169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6219	3841	10057
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10063	29.782	NaN	3418.9	30	0	257.28	0.037				-1	LHFLFYNE	8	68	562.7750718536194	1123.5355907740386	2	562.7745361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LHFLFYNE_	ENST00000358273.8_2_17:29701267-29701405:+|nuORF	42.47446043378293	0.6409579893742323	5				NaN	NaN	0	NaN	6220	3841	10057
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10064	29.783	NaN	1131.4	30	0	112.5	0.141			+	18708	ITEKREQLG	9	47	537.3021850585938	NaN	0	537.3021850585938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ITEKREQLG_	REV__ENSG00000066933|ENST00000356056|MYO9A;REV__MYO9A|p.R2168C|1|0.37|ENSG00000066933|chr15:71851332-71851332|G/A|missense_variant;REV__nc|ENSG00000066933|B2RTY4-2|MYO9A;REV__nc|ENSG00000066933|B2RTY4-4|MYO9A;REV__nc|ENSG00000066933|B2RTY4-5|MYO9A	28.081489160057373	0.33578952234132536	5				NaN	NaN	0	NaN	6221	3841	10057
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10074	29.808	NaN	6975.7	30	0	1237.1	0.214	+			6027	AVMEMMSQK	9	68	527.741015010701	1053.4674770882018	2	527.7407836914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVMEMMSQK_	ENSG00000123349|ENST00000334478|PFDN5;ENST00000552341.5_1_12:53691573-53693126:+|nuORF;nc|ENSG00000123349|Q99471-3|PFDN5	115.49404669440601	0.023927554121326553	5				NaN	NaN	0	NaN	6228	3844	10073
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10075	29.811	NaN	3099.3	30	0	778.02	0.106				-1	 	0	51	425.24608055999516	848.4776081867903	2	425.2451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6229	3844	10073
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10076	29.813	NaN	1829.5	30	0	228.27	0.106	+			40477	STWEGIQAGK	10	64	538.7734242365835	1075.532295539967	2	538.7730102539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STWEGIQAGK_	ENSG00000177156|ENST00000319006|TALDO1;ENST00000530119.5_1_11:747481-760254:+|nuORF;ENST00000533796.1_1_11:755745-760254:+|nuORF;nc|ENSG00000177156|P37837-2|TALDO1	61.691277971877994	0.35045824941635534	5				NaN	NaN	0	NaN	6230	3844	10073
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10077	29.815	NaN	2770.2	30	0	526.7	0.106				-1	 	0	47	401.2171839202337	800.4198149072674	2	401.2161865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6231	3844	10073
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10078	29.817	NaN	1647.4	30	0	132.21	0.106			+	50871	YFDLNYVI	8	58	523.7645401165676	1045.514527299935	2	523.763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YFDLNYVI_	REV__tr|U7SEE2|U7SEE2_FUSNURibosomalproteinL11methyltransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=prmAPE=3SV=1	38.80614096846853	0.6637206697844082	5				NaN	NaN	0	NaN	6232	3844	10073
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10079	29.819	NaN	1715.9	30	0	173.95	0.106	+			46525	VEWQQKAQM	9	59	574.2840069407937	1146.5534609483873	2	574.2830200195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VEWQQKAQM_	ENSG00000147065|ENST00000360270|MSN	71.87747018426188	0.13267044672804276	5				NaN	NaN	0	NaN	6233	3844	10073
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10080	29.821	NaN	2158.1	30	0	309.61	0.037			+	-1	KNAYLSCGTM	10	72	580.7572691078714	1159.4999852825426	2	580.7576904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C),Oxidation (M)	_KNAYLSC(Carbamidomethyl (C))GTM(Oxidation (M))_	REV__ENSG00000134873|ENST00000299339|CLDN10;REV__nc|ENSG00000134873|P78369-2|CLDN10;REV__nc|ENSG00000134873|P78369-3|CLDN10	36.446750945000026	0.5818864909973037	5				NaN	NaN	0	NaN	6234	3844	10073
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10091	29.844	NaN	2254.1	30	0	352.11	0.214	+			12600	GEHLKTDLL	9	58	513.2858177033892	1024.5570824735782	2	513.2847290039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEHLKTDLL_	ENSG00000100345|ENST00000216181|MYH9;MYH9|p.I784*|1|0.07|ENSG00000100345|chr22:36304036-36304036|G/-|frameshift_variant;nc|ENSG00000100345|P35579-2|MYH9	49.536043120802724	0.308405419312776	5				NaN	NaN	0	NaN	6242	3847	10090
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10092	29.848	NaN	2697.4	30	0	309.03	0.106	+			36653	SGLSMKAQAI	10	68	503.27179850029563	1004.5290440673913	2	503.2713623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SGLSMKAQAI_	COG1|p.F857Sfs*23|1|0.36|ENSG00000166685|chr17:73206210-73206210|T/-|frameshift_variant;ENSG00000166685|ENST00000299886|COG1	67.49366992349736	0.29779660154124327	5				NaN	NaN	0	NaN	6243	3847	10090
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10093	29.85	NaN	3757.1	30	0	394.74	0.106				-1	 	0	52	436.27271587660493	870.5308788200099	2	436.2713928222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6244	3847	10090
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10094	29.852	NaN	2141.2	30	0	284.97	0.033	+			28598	NKNLLVAN	8	52	443.260009765625	NaN	0	443.260009765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NKNLLVAN_	tr|U7SNE4|U7SNE4_FUSNUDUF2262domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01814PE=4SV=1	40.5726180659479	1.7418937515398478	5				NaN	NaN	0	NaN	6245	3847	10090
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10102	29.87	NaN	2814.7	30	0	380.34	0.214			+	42753	TDPQLDAGAE	10	67	508.7312217464022	1015.4478905596044	2	508.7297058105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TDPQLDAGAE_	REV__ENSG00000132793|ENST00000373257|LPIN3;REV__LPIN3|p.G368Afs*52|1|0.31|ENSG00000132793|chr20:41350389-41350389|G/-|frameshift_variant;REV__LPIN3|p.K715Rfs*19|1|0.47|ENSG00000132793|chr20:41357981-41357981|C/-|frameshift_variant;REV__nc|ENSG00000132793|Q9BQK8-2|LPIN3	62.107414245175825	0.3466735403679669	5				NaN	NaN	0	NaN	6250	3850	10101
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10103	29.873	NaN	1927.4	30	0	281.3	0.106				-1	 	0	48	467.75395348263305	933.4933540320661	2	467.7528381347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6251	3850	10101
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10104	29.875	NaN	1680.2	30	0	132.48	0.106			+	28026	MYVAFMIF	8	55	511.24623513182127	NaN	0	511.2459411621094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MYVAFMIF_	REV__ENST00000441248.5_1_X:148622401-148622455:+|nuORF	43.626045697637714	1.7418937515398478	5				NaN	NaN	0	NaN	6252	3850	10101
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10105	29.877	NaN	3816.6	30	0	593.53	0.106	+			49316	VVRTAGRWW	9	68	565.814813265935	1129.6150735986698	2	565.8138427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVRTAGRWW_	ENST00000495526.5_1_1:40207631-40211283:+|nuORF	35.61828744233558	0.47037581924408073	5				NaN	NaN	0	NaN	6253	3850	10101
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10106	29.879	NaN	2429.5	30	0	749.78	0.106	+			7040	CSSDWAKPVF	10	60	570.2621443833359	1138.5097358334717	2	570.2616577148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_CSSDWAKPVF_	nc|ENSG00000143194|Q96JY0-2|MAEL	51.52775601994872	0.4429225830406686	5				NaN	NaN	0	NaN	6254	3850	10101
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10107	29.881	NaN	2509.5	30	0	326.41	0.106				-1	 	0	44	488.7650986199398	975.5156443066796	2	488.76336669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6255	3850	10101
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10108	29.883	NaN	1376.4	30	0	95.303	0.035	+			31128	QGDALRQMQ	9	62	523.753231378587	NaN	0	523.7535400390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QGDALRQMQ_	ENSG00000126561|ENST00000590949|STAT5A;nc|ENSG00000126561|P42229-2|STAT5A	51.33545320467046	0.19748963086191895	5				NaN	NaN	0	NaN	6256	3850	10101
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10118	29.904	NaN	3556	30	0	410.93	0.214	+			13274	GITPGATVLT	10	53	465.26670249204153	928.5188520508831	2	465.2658996582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GITPGATVLT_	ENSG00000181873|ENST00000366711|IBA57;ENST00000484749.5_1_1:228360905-228363211:+|nuORF;ENST00000546123.2_1_1:228362303-228363211:+|nuORF	40.77816245573522	0.5419747034533848	5				NaN	NaN	0	NaN	6263	3853	10117
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10119	29.908	NaN	1800	30	0	276.45	0.106	+			38493	SSATLNSIVAK	11	66	545.8091640156905	1089.603775098181	2	545.8087768554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSATLNSIVAK_	ENSG00000007944|ENST00000356840|MYLIP;MYLIP|p.K199Rfs*26|1|0.07|ENSG00000007944|chr6:16143150-16143151|-/GAATT|frameshift_variant;MYLIP|p.R317Kfs*8|1|0.09|ENSG00000007944|chr6:16145014-16145015|-/A|frameshift_variant	53.59686742100583	0.38061189074210516	5				NaN	NaN	0	NaN	6264	3853	10117
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10120	29.91	NaN	1741	30	0	128.3	0.035	+			50794	YENTKLLSA	9	58	519.777740374574	1037.540927815948	2	519.7771606445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YENTKLLSA_	ENSG00000127324|ENST00000247829|TSPAN8;ENST00000552128.2_1_12:71519116-71532942:-|nuORF	60.11826168202944	0.21262886028301267	5				NaN	NaN	0	NaN	6265	3853	10117
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10130	29.933	NaN	7676.3	30	0	1240.3	0.214	+			28279	NEAKQMIAV	9	70	502.26664070769016	1002.5187284821803	2	502.265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NEAKQMIAV_	ENSG00000078808|ENST00000360001|SDF4;ENST00000465727.5_1_1:1152894-1153089:-|nuORF;ENST00000478938.1_1_1:1152894-1154464:-|nuORF;ENST00000494748.1_1_1:1152894-1154464:-|nuORF;nc|ENSG00000078808|Q9BRK5-2|SDF4;nc|ENSG00000078808|Q9BRK5-5|SDF4;nc|ENSG00000078808|Q9BRK5|SDF4	90.36981228632155	0.0638227155548745	5				NaN	NaN	0	NaN	6272	3856	10129
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10131	29.937	NaN	6950.8	30	0	1526.4	0.106				-1	 	0	68	515.2670948276583	1028.5196367221165	2	515.26611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6273	3856	10129
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10132	29.939	NaN	7335.7	30	0	1204.6	0.106			+	2040	AKRERPFY	8	69	533.7937541631449	1065.5729553930896	2	533.7931518554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AKRERPFY_	REV__ENST00000263253.8_1_22:41488148-41488439:+|nuORF	71.37791200682192	0.3954169775488141	5				NaN	NaN	0	NaN	6274	3856	10129
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10133	29.941	NaN	3213	30	0	322.78	0.106	+			19949	KEFQEASAL	9	60	511.7622777040329	1021.5100024748658	2	511.7611389160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEFQEASAL_	ENSG00000178623|ENST00000407714|GPR35;nc|ENSG00000178623|Q9HC97-2|GPR35	61.691277971877994	0.19951612995419254	5				NaN	NaN	0	NaN	6275	3856	10129
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10134	29.943	NaN	2428.4	30	0	251.02	0.106				-1	 	0	56	491.78300290661724	981.5514528800345	2	491.7816467285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6276	3856	10129
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10135	29.944	NaN	5924.5	30	0	2065.8	0.106			+	-1	FCSLCLFKG	9	66	537.7598047511134	1073.5050565690267	2	537.7591552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_FCSLC(Carbamidomethyl (C))LFKG_	REV__ENST00000578794.1_1_17:56082405-56082510:-|nuORF	63.30626980617807	0.18605348971131092	5				NaN	NaN	0	NaN	6277	3856	10129
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10136	29.946	NaN	1847	30	0	270.23	0.034	+			4689	ATLSICSPK	9	49	460.2505307002607	918.4865084673214	2	460.24932861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATLSICSPK_	ENSG00000121060|ENST00000316881|TRIM25;ENST00000572021.5_1_17:54969063-54989474:-|nuORF;TRIM25|p.G621D|1|0.15|ENSG00000121060|chr17:56891731-56891731|C/T|missense_variant	41.42661286455405	0.403525789677298	5				NaN	NaN	0	NaN	6278	3856	10129
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10152	29.979	NaN	5438.3	30	0	606.02	0.214	+			17453	ICEATKAIS	9	66	496.75896068108915	991.5033684289783	2	496.7576904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_IC(Carbamidomethyl (C))EATKAIS_	ENSG00000175820|ENST00000322527|CCDC168	72.87924865735499	0.12833875048249987	5				NaN	NaN	0	NaN	6291	3859	10151
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10153	29.983	NaN	1447	30	0	84.15	0.106	+			9751	ENFRHQLED	9	67	594.2764736313834	1186.5383943295667	2	594.2750854492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ENFRHQLED_	ENSG00000183808|ENST00000520560|RBM12B;RBM12B|p.E570Gfs*14|1|0.25|ENSG00000183808|chr8:93734704-93734705|-/G|frameshift_variant	58.22992032128504	0.22837015374068087	5				NaN	NaN	0	NaN	6292	3859	10151
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10154	29.985	NaN	1915.3	30	0	183.7	0.106	+			837	AEGIVNGHTL	10	57	505.7675608815432	1009.5205688298864	2	505.76605224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEGIVNGHTL_	ENSG00000109911|ENST00000640961|ELP4;nc|ENSG00000109911|Q96EB1-2|ELP4;nc|ENSG00000109911|Q96EB1-3|ELP4	46.45678178249821	0.4896490706773647	5				NaN	NaN	0	NaN	6293	3859	10151
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10155	29.987	NaN	1999.5	30	0	268.18	0.106				-1	FMMALLDAQ	9	61	528.2497704811967	1054.4849880291933	2	528.24951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_FMM(Oxidation (M))ALLDAQ_	ARMC2|p.L815*|1|0.05|ENSG00000118690|chr6:108965134-108965134|T/-|frameshift_variant;ENSG00000118690|ENST00000392644|ARMC2;nc|ENSG00000118690|Q8NEN0-2|ARMC2	47.91560031466742	0.327412564698279	5				NaN	NaN	0	NaN	6294	3859	10151
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10156	29.989	NaN	3475	30	0	472.04	0.106			+	11813	FSTAQVLAAEL	11	69	575.3127683551177	1148.6109837770352	2	575.3114013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FSTAQVLAAEL_	REV__ENSG00000160401|ENST00000373295|CFAP157;REV__nc|ENSG00000160401|Q5JU67-2|CFAP157	49.536043120802724	0.4274608637932522	5				NaN	NaN	0	NaN	6295	3859	10151
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10157	29.99	NaN	1440.3	30	0	171.9	0.033	+			37270	SLAFPGVPL	9	57	450.7647705078125	NaN	0	450.7647705078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLAFPGVPL_	ENSG00000147813|ENST00000449291|NAPRT;ENST00000480946.6_1_8:144659238-144660323:-|nuORF;NAPRT|p.G402Afs*5|1|0.35|ENSG00000147813|chr8:143575509-143575509|C/-|frameshift_variant;nc|ENSG00000147813|Q6XQN6-2|NAPRT;nc|ENSG00000147813|Q6XQN6-3|NAPRT	62.97842346883844	0.13661591499337852	5				NaN	NaN	0	NaN	6296	3859	10151
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10158	29.991	NaN	2088.9	30	0	205.83	0.141			+	16904	HPKEGTHIY	9	67	541.2761856810141	1080.5378184288281	2	542.27685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HPKEGTHIY_	REV__ENSG00000165702|ENST00000372122|GFI1B;REV__nc|ENSG00000165702|Q5VTD9-2|GFI1B	30.503639358989545	0.5181749237905803	5				NaN	NaN	0	NaN	6297	3859	10151
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10174	30.026	NaN	5037.4	30	0	638.33	0.214				-1	TIYFLMHK	8	72	534.7831634387073	1067.5517739442146	2	534.7827758789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_TIYFLM(Oxidation (M))HK_	ENSG00000181038|ENST00000341249|METTL23;nc|ENSG00000181038|Q86XA0-2|METTL23	57.81127852772723	0.5234495074909924	5				NaN	NaN	0	NaN	6310	3862	10173
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10175	30.03	NaN	3908.3	30	0	861.16	0.106	+			16971	HPQPTQVQF	9	68	541.2761856810141	1080.5378184288281	2	541.2755126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HPQPTQVQF_	ENSG00000172534|ENST00000310441|HCFC1;HCFC1|p.P1894Lfs*22|1|0.06|ENSG00000172534|chrX:153950835-153950835|G/-|frameshift_variant;nc|ENSG00000172534|P51610-2|HCFC1;nc|ENSG00000172534|P51610-4|HCFC1	60.11826168202944	0.21262886028301267	5				NaN	NaN	0	NaN	6311	3862	10173
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10176	30.032	NaN	7534.9	30	0	1933.2	0.106	+			24247	LETKWILLQ	9	68	572.341448567384	1142.6683442015678	2	572.340576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LETKWILLQ_	ENST00000449849.2_1_2:203789500-203789902:+|nuORF	95.81516180277367	0.04847050768394289	5				NaN	NaN	0	NaN	6312	3862	10173
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10177	30.033	NaN	1681.7	30	0	185.09	0.106	+			29334	NYSSAVQKF	9	60	522.2612372843229	1042.5079216354457	2	522.261962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NYSSAVQKF_	ENSG00000079482|ENST00000355520|OPHN1;nc|ENSG00000079482|O60890-2|OPHN1;OPHN1|p.V742Sfs*43|1|0.37|ENSG00000079482|chrX:68053746-68053747|-/G|frameshift_variant	42.86426827375447	0.38666266728046506	5				NaN	NaN	0	NaN	6313	3862	10173
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10178	30.035	NaN	3840.9	30	0	471.51	0.106	+			8194	EAAVAIKAM	9	59	452.2533309783911	902.4921090235822	2	452.25177001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EAAVAIKAM_	ENSG00000132507|ENST00000336458|EIF5A;ENSG00000253626|ENST00000520547|EIF5AL1;nc|ENSG00000132507|P63241-2|EIF5A	161.89823264540465	0.004149850016316161	5				NaN	NaN	0	NaN	6314	3862	10173
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10179	30.037	NaN	1724.2	30	0	204.02	0.035			+	-1	IIEQQICI	8	60	508.7750117860256	NaN	0	508.7747497558594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_IIEQQIC(Carbamidomethyl (C))I_	REV__ENSG00000196074|ENST00000357552|SYCP2;REV__SYCP2|p.I1202*|1|0.2|ENSG00000196074|chr20:59869935-59869935|T/-|frameshift_variant;REV__SYCP2|p.I1202Nfs*14|1|0.35|ENSG00000196074|chr20:59869934-59869935|-/T|frameshift_variant;REV__SYCP2|p.K1410Nfs*10|1|0.29|ENSG00000196074|chr20:59866383-59866383|T/-|frameshift_variant;REV__SYCP2|p.L1317Tfs*3|1|0.49|ENSG00000196074|chr20:59868452-59868453|-/T|frameshift_variant;REV__SYCP2|p.M176*|1|0.23|ENSG00000196074|chr20:59915538-59915538|T/-|frameshift_variant;REV__SYCP2|p.N1164Tfs*34|1|0.15|ENSG00000196074|chr20:59873920-59873920|T/-|frameshift_variant;REV__SYCP2|p.S1456Afs*9|1|0.28|ENSG00000196074|chr20:59865820-59865820|T/-|frameshift_variant;REV__SYCP2|p.V338Yfs*8|1|0.39|ENSG00000196074|chr20:59907386-59907386|T/-|frameshift_variant	33.51558372728122	1.7418937515398478	5				NaN	NaN	0	NaN	6315	3862	10173
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10195	30.07	NaN	4757.1	30	0	334.69	0.214			+	47230	VMKAGDKAIG	10	62	495.2770301922225	988.5395074512451	2	495.7771301269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VMKAGDKAIG_	REV__ENSG00000131844|ENST00000340941|MCCC2;REV__nc|ENSG00000131844|Q9HCC0-2|MCCC2	56.72105179125745	0.3956618550748046	5				NaN	NaN	0	NaN	6328	3865	10194
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10196	30.074	NaN	7181.7	30	0	1097.1	0.106				-1	 	0	73	447.24662965318237	892.4787063731648	2	447.2455139160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6329	3865	10194
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10197	30.076	NaN	1533.8	30	0	88.179	0.106			+	8339	EAKSLLSAVAG	11	60	523.2990590845495	1044.583565235899	2	523.2979736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EAKSLLSAVAG_	REV__ENSG00000171604|ENST00000302517|CXXC5;REV__nc|ENSG00000171604|Q7LFL8-2|CXXC5	65.15724298150197	0.2774196309614691	5				NaN	NaN	0	NaN	6330	3865	10194
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10198	30.078	NaN	2357.2	30	0	1308.1	0.106	+			48803	VVAAVIWRK	9	30	347.89103000755546	1040.6512606228664	3	347.89013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVAAVIWRK_	ENSG00000204592|ENST00000376630|HLA-E	42.396135135203025	0.392153681582562	5				NaN	NaN	0	NaN	6331	3865	10194
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10199	30.079	NaN	1910.8	30	0	100.48	0.106			+	21019	KKINAPSIQ	9	66	499.80311147999186	NaN	0	499.8030700683594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KKINAPSIQ_	REV__ENSG00000135436|ENST00000257894|FAM186B;REV__ENST00000533372.1_1_12:49976813-49999059:-|nuORF;REV__nc|ENSG00000135436|Q8IYM0-2|FAM186B	54.776311868738084	0.17377682019723872	5				NaN	NaN	0	NaN	6332	3865	10194
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10200	30.081	NaN	1629.1	30	0	362.92	0.036			+	27492	MMEVLKKCN	9	56	548.2707567783737	NaN	0	548.2708129882812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MMEVLKKCN_	REV__sp|F5HBR4|PORTL_HCMVMPortalproteinOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL104PE=3SV=1;REV__sp|P16735|PORTL_HCMVAPortalproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL104PE=1SV=2	42.396135135203025	0.2590952873412954	5				NaN	NaN	0	NaN	6333	3865	10194
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10201	30.082	NaN	2080.3	30	0	179.81	0.141	+			17892	IGDTLCQKLQ	10	61	559.7983384480037	NaN	0	559.7727661132812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IGDTLCQKLQ_	ENSG00000033178|ENST00000322244|UBA6	38.753607047826485	0.3729281687199363	5				NaN	NaN	0	NaN	6334	3865	10194
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10214	30.111	NaN	16514	30	0	2402.9	0.214				-1	 	0	68	472.77520735880864	943.5358617844173	2	472.7740173339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6344	3868	10213
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10215	30.115	NaN	6206.8	30	0	871.01	0.106	+			33689	RPAPVEVTY	9	73	516.280485198253	1030.546417463306	2	516.2798461914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RPAPVEVTY_	ENSG00000112245|ENST00000626021|PTP4A1	77.31757898189308	0.1091473830098891	5				NaN	NaN	0	NaN	6345	3868	10213
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10216	30.117	NaN	5220.8	30	0	488.44	0.106	+			12827	GENFNKALV	9	65	496.26435601041214	990.5141590876243	2	496.2638244628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GENFNKALV_	ENSG00000110244|ENST00000357780|APOA4	66.42927471994793	0.16001998865088202	5				NaN	NaN	0	NaN	6346	3868	10213
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10217	30.119	NaN	5028.3	30	0	510.46	0.106	+			39687	STIGVDGSVYK	11	67	563.2941218869353	1124.5736908406705	2	563.29345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STIGVDGSVYK_	ENSG00000159399|ENST00000290573|HK2;ENST00000447818.2_1_X:79828255-79829731:-|nuORF	128.60217544463768	0.003645184319602832	5				NaN	NaN	0	NaN	6347	3868	10213
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10218	30.121	NaN	3291.8	30	0	310.14	0.106	+			2640	AQINSVFNK	9	67	510.7780656838936	1019.5415784345872	2	510.7773132324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AQINSVFNK_	ENSG00000117597|ENST00000491415|UTP25	80.45461616416974	0.09558281504443908	5				NaN	NaN	0	NaN	6348	3868	10213
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10219	30.122	NaN	2548.6	30	0	308.29	0.106	+			6004	AVMDGNVITAK	11	66	559.7983384480037	NaN	0	559.797607421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AVMDGNVITAK_	ENSG00000103316|ENST00000572914|CRYM;ENST00000571666.1_1_16:21273345-21289551:-|nuORF	55.25784877116998	0.27755489777811576	5				NaN	NaN	0	NaN	6349	3868	10213
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10220	30.124	NaN	1400.6	30	0	199.95	0.036				-1	CFSFIGCKL	9	58	537.7598047511134	1073.5050565690267	2	537.7577514648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_CFSFIGC(Carbamidomethyl (C))KL_	nc|ENSG00000116991|Q9P2F8-2|SIPA1L2	29.14955571784316	0.5308295550522326	5				NaN	NaN	0	NaN	6350	3868	10213
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10233	30.152	NaN	10306	30	0	1654.5	0.215	+			14501	GTCLLIANK	9	69	495.2770301922225	988.5395074512451	2	495.2760009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GTC(Carbamidomethyl (C))LLIANK_	CARM1|p.I452Sfs*12|1|0.18|ENSG00000142453|chr19:10920679-10920683|TTGTG/-|frameshift_variant;ENSG00000142453|ENST00000327064|CARM1;nc|ENSG00000142453|Q86X55-1|CARM1	131.03138772384656	0.014687601201650916	5				NaN	NaN	0	NaN	6360	3871	10232
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10234	30.155	NaN	6077.4	30	0	579.55	0.106			+	7535	DGSTLKVAL	9	62	452.261621266689	902.5086896001781	2	452.2605285644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DGSTLKVAL_	REV__ENSG00000129566|ENST00000262715|TEP1;REV__nc|ENSG00000129566|Q99973-2|TEP1;REV__TEP1|p.K1597Sfs*14|1|0.27|ENSG00000129566|chr14:20380448-20380448|T/-|frameshift_variant;REV__TEP1|p.L888Wfs*31|1|0.45|ENSG00000129566|chr14:20387928-20387928|G/-|frameshift_variant;REV__TEP1|p.N507Efs*11|1|0.29|ENSG00000129566|chr14:20401014-20401015|-/C|frameshift_variant;REV__TEP1|p.R392Afs*22|1|0.27|ENSG00000129566|chr14:20403743-20403743|G/-|frameshift_variant;REV__TEP1|p.V1856Lfs*45|3|0.41|ENSG00000129566|chr14:20378179-20378179|C/-|frameshift_variant	71.29570347882199	0.13518600952103718	5				NaN	NaN	0	NaN	6361	3871	10232
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10235	30.157	NaN	3598.4	30	0	926.24	0.106				-1	 	0	47	401.2171839202337	800.4198149072674	2	401.21624755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6362	3871	10232
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10236	30.159	NaN	2621.5	30	0	753.32	0.106				-1	 	0	57	430.267086099821	858.519619266442	2	430.2657165527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6363	3871	10232
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10237	30.161	NaN	1149.7	30	0	110.44	0.106	+			45867	VAMGYSHSL	9	50	482.7311664478019	NaN	0	482.7312927246094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VAMGYSHSL_	ENSG00000179051|ENST00000375436|RCC2	53.351449002276354	0.18359631779194618	5				NaN	NaN	0	NaN	6364	3871	10232
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10238	30.163	NaN	2834.8	30	0	253.75	0.036			+	-1	CFNITFSY	8	66	526.2285613993295	NaN	0	526.228271484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_C(Carbamidomethyl (C))FNITFSY_	REV__ENSG00000170917|ENST00000304430|NUDT6;REV__nc|ENSG00000170917|P53370-2|NUDT6;REV__NUDT6|p.K230E|1|0.4|ENSG00000170917|chr4:122893091-122893091|T/C|missense_variant	44.116797842482775	1.7418937515398478	5				NaN	NaN	0	NaN	6365	3871	10232
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10239	30.163	NaN	2235.8	30	0	430.68	0.143				-1	 	0	40	336.5348629037366	1006.5827593114099	3	336.5341491699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6366	3871	10232
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10250	30.19	NaN	15295	30	0	2516.6	0.214	+			39964	STMGYMMAK	9	72	510.22232631592743	1018.4300996986549	2	510.22235107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STMGYMMAK_	ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;ENST00000518337.1_1_8:74128289-74128592:-|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P	166.67852932204877	0.003333876602083393	5				NaN	NaN	0	NaN	6374	3874	10249
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10251	30.194	NaN	4718.3	30	0	478.69	0.106	+			45930	VAQSTRIIY	9	66	525.8018703221788	1049.5891877111576	2	525.8012084960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VAQSTRIIY_	ENSG00000111669|ENST00000396705|TPI1;nc|ENSG00000111669|P60174-3|TPI1;nc|ENSG00000111669|P60174-4|TPI1	35.15202426646627	0.4747332964206883	5				NaN	NaN	0	NaN	6375	3874	10249
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10252	30.196	NaN	4281.2	30	0	1061.2	0.106	+			32388	QVCDVVLNH	9	60	542.2673800010173	1082.5202070688345	2	542.2672729492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_QVC(Carbamidomethyl (C))DVVLNH_	ENSG00000050327|ENST00000056217|ARHGEF5;nc|ENSG00000050327|Q12774-2|ARHGEF5	51.33545320467046	0.2872990594074956	5				NaN	NaN	0	NaN	6376	3874	10249
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10253	30.198	NaN	2207.2	30	0	210.2	0.106	+			28096	NAFKEITTM	9	69	535.7639715963201	1069.51339025944	2	535.7637939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_NAFKEITTM(Oxidation (M))_	ENSG00000137947|ENST00000370500|GTF2B;ENST00000486078.1_1_1:89325774-89329699:-|nuORF;ENST00000494819.5_1_1:89324456-89357188:-|nuORF	82.7504851949679	0.08565546331141553	5				NaN	NaN	0	NaN	6377	3874	10249
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10254	30.199	NaN	1946.6	30	0	244.02	0.106			+	-1	ELMLGLLM	8	53	476.2478409467872	NaN	0	476.24822998046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Oxidation (M)	_ELM(Oxidation (M))LGLLM(Oxidation (M))_	REV__ENSG00000115474|ENST00000233826|KCNJ13	37.028477286268924	1.7418937515398478	5				NaN	NaN	0	NaN	6378	3874	10249
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10255	30.201	NaN	2494.6	30	0	297.14	0.106			+	-1	QLMMFLSL	8	56	499.75754574006595	997.5005385469319	2	499.75732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_QLM(Oxidation (M))MFLSL_	REV__ABCA13|p.A4442Pfs*3|1|0.06|ENSG00000179869|chr7:48506365-48506365|G/-|frameshift_variant;REV__ABCA13|p.H2188Ifs*3|1|0.11|ENSG00000179869|chr7:48276226-48276226|C/-|frameshift_variant;REV__ABCA13|p.K3855Nfs*139|1|0.3|ENSG00000179869|chr7:48389131-48389153|GGCTGTGGTCCAAGACCTCAGCC/-|frameshift_variant;REV__ENSG00000179869|ENST00000435803|ABCA13;REV__nc|ENSG00000179869|Q86UQ4-4|ABCA13;REV__nc|ENSG00000179869|Q86UQ4|ABCA13	47.91560031466742	0.6071945918984287	5				NaN	NaN	0	NaN	6379	3874	10249
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10256	30.203	NaN	1808	30	0	378.87	0.037			+	1089	AELDKGEQLE	10	57	566.2815417368082	1130.5485305404163	2	566.2815551757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AELDKGEQLE_	REV__ENST00000592124.1_1_19:34756504-34790780:+|nuORF	70.39856735676683	0.27406383984062843	5				NaN	NaN	0	NaN	6380	3874	10249
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10264	30.223	NaN	11720	30	0	1379.3	0.214	+			20529	KFIDTTSKF	9	74	543.7960817202628	1085.5776105073255	2	543.7957153320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KFIDTTSKF_	ENSG00000100316|ENST00000216146|RPL3;ENSG00000140986|ENST00000268661|RPL3L;ENST00000417615.1_1_14:99439218-99439536:-|nuORF;ENST00000473638.5_1_22:39708982-39709710:-|nuORF	140.11223852658463	0.010427410095706195	5				NaN	NaN	0	NaN	6385	3877	10263
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10265	30.226	NaN	4697.1	30	0	443.46	0.106			+	-1	QFDPQQTPM	9	66	554.2417771831198	1106.4690014330395	2	554.240966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_QFDPQQTPM(Oxidation (M))_	REV__EFCAB8|p.L1154Q|1|0.23|ENSG00000215529|chr20:32961203-32961203|T/A|missense_variant	63.30626980617807	0.18605348971131092	5				NaN	NaN	0	NaN	6386	3877	10263
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10266	30.228	NaN	2993.8	30	0	1528.5	0.106			+	38668	SSIRAKLGQY	10	63	561.8171493738319	1121.6197458144636	2	561.81640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSIRAKLGQY_	REV__ENSG00000058335|ENST00000558480|RASGRF1;REV__ENST00000560334.5_1_15:79271198-79356973:-|nuORF;REV__nc|ENSG00000058335|Q13972|RASGRF1	29.170058357718403	0.6416167986984785	5				NaN	NaN	0	NaN	6387	3877	10263
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10267	30.23	NaN	3139.6	30	0	682.43	0.106			+	35519	SAVEAQLFTYC	11	60	616.2855101319152	1230.5564673306303	2	616.2843627929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SAVEAQLFTYC_	REV__nc|ENSG814|P63133|ERVK-8_pol	29.170058357718403	0.683821074385409	5				NaN	NaN	0	NaN	6388	3877	10263
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10268	30.232	NaN	2775.7	30	0	381.49	0.106	+			11102	FFIFKTSA	8	55	480.7636997371813	959.5128465411626	2	480.7624816894531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FFIFKTSA_	ENST00000428109.5_1_6:13328159-13328339:-|nuORF	34.172542307311794	0.6954784234644539	5				NaN	NaN	0	NaN	6389	3877	10263
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10269	30.234	NaN	1482.5	30	0	175.79	0.106	+			17305	IAEEQQRIL	9	63	550.310407275889	1098.606261618578	2	550.3089599609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IAEEQQRIL_	ENSG00000092964|ENST00000521913|DPYSL2;ENST00000521983.1_1_8:26484742-26500445:+|nuORF;nc|ENSG00000092964|Q16555-2|DPYSL2;nc|ENSG00000092964|Q16555|DPYSL2	44.377184641726394	0.36891676396732553	5				NaN	NaN	0	NaN	6390	3877	10263
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10270	30.236	NaN	8173.5	30	0	3912.2	0.036				-1	 	0	57	356.8630455962915	1067.5673073890746	3	357.1968688964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6391	3877	10263
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10279	30.256	NaN	9549.5	30	0	1893.1	0.214				-1	 	0	62	497.782908634091	993.551264334982	2	497.7816162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6397	3880	10278
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10280	30.259	NaN	12887	30	0	6522.4	0.106				-1	 	0	60	350.859460554155	1049.556552262665	3	350.85870361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6398	3880	10278
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10281	30.261	NaN	11369	30	0	3203	0.106	+			50051	WERVSHLK	8	72	527.7935481976875	1053.572543462175	2	527.7928466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_WERVSHLK_	ENSG00000168070|ENST00000301896|MAJIN	65.80317337860623	0.44433089765398776	5				NaN	NaN	0	NaN	6399	3880	10278
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10282	30.263	NaN	6962.1	30	0	699.03	0.106	+			12822	GENADSQIKL	10	69	537.7760115539755	1073.537470174751	2	537.7755737304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GENADSQIKL_	ENSG00000189060|ENST00000340857|H1-0;nc|ENSG00000189060|P07305-2|H1-0	107.45493779368988	0.05555770664244329	5				NaN	NaN	0	NaN	6400	3880	10278
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10283	30.265	NaN	2932.5	30	0	588.73	0.106	+			31091	QFLKGLSEF	9	66	534.7908192473858	1067.5670855615715	2	534.7898559570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QFLKGLSEF_	ENSG00000242732|ENST00000609883|RTL5	47.657333605630114	0.33044192980041115	5				NaN	NaN	0	NaN	6401	3880	10278
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10284	30.267	NaN	3895.1	30	0	1002.4	0.106	+			30938	QELQELNRV	9	62	564.8050131676217	1127.5954734020434	2	565.3052978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QELQELNRV_	ENST00000486498.1_1_2:171811278-171813015:+|nuORF	85.86182877749512	0.07653218437724067	5				NaN	NaN	0	NaN	6402	3880	10278
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10285	30.269	NaN	2102.8	30	0	182.21	0.037	+			646	AEAEAITSQKL	11	65	580.8116209933883	1159.6086890535764	2	580.8115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AEAEAITSQKL_	ENSG00000203697|ENST00000366872|CAPN8	49.280055037864464	0.43096356235087463	5				NaN	NaN	0	NaN	6403	3880	10278
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10298	30.295	NaN	2350.9	30	0	372.32	0.214	+			4690	ATLSICSPK	9	44	460.2505307002607	918.4865084673214	2	460.2492980957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATLSICSPK_	ENSG00000121060|ENST00000316881|TRIM25;ENST00000572021.5_1_17:54969063-54989474:-|nuORF;TRIM25|p.G621D|1|0.15|ENSG00000121060|chr17:56891731-56891731|C/T|missense_variant	95.81516180277367	0.04847050768394289	5				NaN	NaN	0	NaN	6413	3883	10297
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10299	30.299	NaN	5419.5	30	0	1317.8	0.106			+	47097	VLLCGWWL	8	60	495.26833524514564	988.5221175570913	2	495.2670593261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VLLCGWWL_	REV__ENDOD1|p.F482Lfs*71|1|0.3|ENSG00000149218|chr11:95129518-95129518|T/-|frameshift_variant	54.89457262308372	0.5523244765420926	5				NaN	NaN	0	NaN	6414	3883	10297
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10300	30.301	NaN	2817.4	30	0	1056.7	0.106				-1	 	0	49	451.2905471513052	900.5665413694104	2	451.2891540527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6415	3883	10297
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10301	30.303	NaN	4883.4	30	0	590.28	0.106			+	11104	FFIGCVFCIA	10	67	560.270569601699	1118.5265862701979	2	560.2693481445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FFIGCVFCIA_	REV__SFT2D1|p.V45I|2|0.2|ENSG00000198818|chr6:166330178-166330178|C/T|missense_variant	65.89745868150666	0.31220354485832413	5				NaN	NaN	0	NaN	6416	3883	10297
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10302	30.305	NaN	2123.1	30	0	188.61	0.106				-1	 	0	59	491.78300290661724	981.5514528800345	2	491.781494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6417	3883	10297
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10303	30.306	NaN	1984.8	30	0	297.96	0.106				-1	 	0	47	407.73796578358423	813.4613786339685	2	407.737060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6418	3883	10297
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10304	30.308	NaN	2039.5	30	0	368.18	0.034	+			24632	LGSPWRPH	8	57	475.25210273824064	948.4896525432813	2	475.2506103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LGSPWRPH_	ENST00000524249.5_1_2:46768823-46769105:-|nuORF	57.81127852772723	0.5234495074909924	5				NaN	NaN	0	NaN	6419	3883	10297
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10322	30.346	NaN	4863.3	30	0	1281.6	0.214	+			50707	YEERVQAVV	9	65	546.7895945332513	1091.5646361333024	2	546.7891845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YEERVQAVV_	ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1;SPTBN1|p.K503Rfs*24|1|0.06|ENSG00000115306|chr2:54626095-54626095|G/-|frameshift_variant	42.86426827375447	0.38666266728046506	5				NaN	NaN	0	NaN	6434	3886	10321
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10323	30.349	NaN	3176.3	30	0	309.33	0.106	+			31693	QNLLHGYAF	9	64	531.7711050058025	1061.527657078405	2	531.770263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QNLLHGYAF_	ENSG00000124406|ENST00000381668|ATP8A1;nc|ENSG00000124406|Q9Y2Q0-2|ATP8A1;nc|ENSG00000124406|Q9Y2Q0-3|ATP8A1	26.79610172149135	0.5528238334041078	5				NaN	NaN	0	NaN	6435	3886	10321
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10324	30.351	NaN	1912.4	30	0	191.56	0.106	+			22997	KVSDYILQH	9	65	551.7987842389681	NaN	0	551.7992553710938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KVSDYILQH_	ENSG00000148219|ENST00000313400|ASTN2;nc|ENSG00000148219|O75129-2|ASTN2;nc|ENSG00000148219|O75129-3|ASTN2;nc|ENSG00000148219|O75129-4|ASTN2;nc|ENSG00000148219|O75129-6|ASTN2	51.19269402634007	0.19847346126499396	5				NaN	NaN	0	NaN	6436	3886	10321
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10325	30.353	NaN	4456.1	30	0	732.92	0.106				-1	 	0	61	505.7334932998326	1009.4524336664653	2	505.7327575683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6437	3886	10321
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10326	30.355	NaN	2838.9	30	0	385	0.106	+			43204	TEVIHTGTL	9	64	485.76480400669334	969.5150550801867	2	485.7637634277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TEVIHTGTL_	ENSG00000182986|ENST00000682928|ZNF320;ENSG00000189190|ENST00000692063|ZNF600;ENSG00000203326|ENST00000474037|ZNF525;ENSG00000204604|ENST00000595646|ZNF468;ENSG00000213020|ENST00000652185|ZNF611;ENSG00000213793|ENST00000638862|ZNF888;ENSG00000213799|ENST00000458035|ZNF845;nc|ENSG00000189190|Q6ZNG1|ZNF600;nc|ENSG00000204604|Q5VIY5-2|ZNF468;nc|ENSG00000213020|Q8N823-2|ZNF611;nc|ENSG00000293246|Q8N8H1|ZNF321P;ZNF468|p.K232Nfs*4|1|0.3|ENSG00000204604|chr19:52841598-52841598|T/-|frameshift_variant;ZNF525|p.S149Yfs*51|1|0.05|ENSG00000203326|chr19:53381024-53381025|-/ATTGC|frameshift_variant;ZNF611|p.F463Lfs*36|1|0.09|ENSG00000213020|chr19:52705666-52705666|A/-|frameshift_variant;ZNF611|p.K221Nfs*6|1|0.35|ENSG00000213020|chr19:52706392-52706392|T/-|frameshift_variant	68.78682469695295	0.14603441672067394	5				NaN	NaN	0	NaN	6438	3886	10321
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10327	30.357	NaN	2245.5	30	0	210.53	0.035	+			41598	SVQGLHSPHS	10	62	524.761986749633	NaN	0	524.7622680664062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVQGLHSPHS_	ENST00000547709.1_1_17:6919595-6920637:+|nuORF	37.81151784470057	0.3760215235790741	5				NaN	NaN	0	NaN	6439	3886	10321
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10328	30.357	NaN	1765.3	30	0	136.87	0.14			+	-1	PHPEPTSEM	9	64	520.7206442611374	1039.4267355890747	2	520.72021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_PHPEPTSEM(Oxidation (M))_	REV__EPB41L2|p.R663H|1|0.36|ENSG00000079819|chr6:130878159-130878159|C/T|missense_variant	31.954861631926434	0.5046124803899898	5				NaN	NaN	0	NaN	6440	3886	10321
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10346	30.397	NaN	5289.3	30	0	771.85	0.214	+			5666	AVDQIAFQK	9	70	510.2809427225853	1018.5473325119706	2	510.27947998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVDQIAFQK_	ENSG00000144554|ENST00000675286|FANCD2;FANCD2|p.I1249Nfs*2|1|0.48|ENSG00000144554|chr3:10090346-10090347|-/A|frameshift_variant;FANCD2|p.N890Ifs*14|1|0.36|ENSG00000144554|chr3:10073312-10073312|A/-|frameshift_variant;nc|ENSG00000144554|Q9BXW9-1|FANCD2;nc|ENSG00000144554|Q9BXW9-3|FANCD2;nc|ENSG00000144554|Q9BXW9-4|FANCD2	101.45984612302182	0.0377122763612125	5				NaN	NaN	0	NaN	6455	3889	10345
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10347	30.4	NaN	6701.4	30	0	1208.1	0.106	+			23436	LADDSVRSL	9	64	488.26035931299214	974.5061656927843	2	488.258544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LADDSVRSL_	ENSG00000138078|ENST00000409411|PREPL;nc|ENSG00000138078|Q4J6C6-2|PREPL;nc|ENSG00000138078|Q4J6C6|PREPL	112.10723106719422	0.02684780151337622	5				NaN	NaN	0	NaN	6456	3889	10345
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10348	30.402	NaN	3628.4	30	0	578.59	0.106	+			36222	SELTQPKL	8	62	458.26290278544855	914.5112526376971	2	458.2607116699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SELTQPKL_	ENSG00000197601|ENST00000354817|FAR1;ENST00000524933.1_1_11:13716477-13732426:+|nuORF	74.25504064058377	0.37144338840759816	5				NaN	NaN	0	NaN	6457	3889	10345
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10349	30.404	NaN	2516.2	30	0	845.21	0.106				-1	 	0	43	421.24901178152396	840.483470629848	2	421.24786376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6458	3889	10345
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10350	30.406	NaN	1571.6	30	0	193.8	0.106	+			6916	CMERGPAL	8	43	438.7062500549308	875.3979471766617	2	438.7051086425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_CMERGPAL_	ENST00000504473.5_1_16:89753600-89759778:+|nuORF	53.351449002276354	0.5676011784961348	5				NaN	NaN	0	NaN	6459	3889	10345
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10351	30.408	NaN	1657.2	30	0	197.67	0.036			+	28941	NRQVESLIV	9	62	529.3046375178055	1056.594722102411	2	529.3040161132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NRQVESLIV_	REV__ENSG00000160703|ENST00000409109|NLRX1	47.657333605630114	0.33044192980041115	5				NaN	NaN	0	NaN	6460	3889	10345
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10352	30.408	NaN	1444.2	30	0	173.85	0.139			+	-1	FAMALAGL	8	45	405.21315263600985	808.4117523388197	2	405.2109680175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_FAM(Oxidation (M))ALAGL_	REV__tr|U7T298|U7T298_FUSNUCitratetransporter-likedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00631PE=3SV=1	43.626045697637714	0.6338121648150432	5				NaN	NaN	0	NaN	6461	3889	10345
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10364	30.435	NaN	45640	30	0	28939	0.214				-1	 	0	81	366.89082493111533	1097.650645393546	3	366.8900451660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6470	3892	10363
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10365	30.439	NaN	17362	30	0	5112.5	0.106				-1	 	0	75	549.8327971602315	1097.651041387263	2	549.8320922851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6471	3892	10363
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10366	30.441	NaN	13949	30	0	1327.5	0.106	+			13009	GEVDVEQHTL	10	80	563.7736674813947	1125.5327820295893	2	563.7731323242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEVDVEQHTL_	ENSG00000134057|ENST00000256442|CCNB1;ENSG00000157456|ENST00000288207|CCNB2;nc|ENSG00000134057|P14635-2|CCNB1	157.3448221729694	0.007191409758142479	5				NaN	NaN	0	NaN	6472	3892	10363
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10367	30.443	NaN	7091	30	0	1203.5	0.106			+	-1	MLTSLEKK	8	59	483.26991522267195	964.5252775121439	2	483.2686462402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_M(Oxidation (M))LTSLEKK_	REV__tr|U7T027|U7T027_FUSNUChaperoneproteinDnaKOS=FusobacteriumnucleatumCTI-5OX=1316586GN=dnaKPE=2SV=1	49.44154591367651	0.597725784090933	5				NaN	NaN	0	NaN	6473	3892	10363
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10368	30.445	NaN	4227.9	30	0	700.92	0.106				-1	 	0	66	477.2937193442966	952.5728857553933	2	477.2923278808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6474	3892	10363
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10369	30.446	NaN	4709.2	30	0	512.38	0.106			+	45419	TVVTPKEGI	9	60	472.2765859817196	NaN	0	472.2764892578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TVVTPKEGI_	REV__ENSG00000102287|ENST00000370328|GABRE;REV__GABRE|p.F157Lfs*33|1|0.13|ENSG00000102287|chrX:151962515-151962515|A/-|frameshift_variant;REV__nc|ENSG00000102287|P78334-2|GABRE	72.87924865735499	0.09578366712754152	5				NaN	NaN	0	NaN	6475	3892	10363
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10370	30.448	NaN	3462.7	30	0	1053.5	0.037	+			37563	SLMHSFILK	9	52	364.53510475383507	1090.5834848617053	3	364.5355224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_SLM(Oxidation (M))HSFILK_	ENSG00000125971|ENST00000357156|DYNLRB1;ENST00000480759.1_1_20:33117938-33128425:+|nuORF	82.7504851949679	0.08565546331141553	5				NaN	NaN	0	NaN	6476	3892	10363
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10382	30.474	NaN	8779.1	30	0	5504.6	0.214				-1	 	0	62	521.2833545329875	1040.5521561327748	2	521.282470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6485	3895	10381
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10383	30.477	NaN	5867.1	30	0	976.7	0.106			+	-1	LVDMGMAKTV	10	59	540.7761049857583	1079.5376570383164	2	540.77587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LVDM(Oxidation (M))GMAKTV_	REV__ENSG00000113108|ENST00000357560|APBB3;REV__ENST00000509914.5_1_5:139938172-139941496:-|nuORF;REV__ENST00000515056.5_1_5:139938172-139941333:-|nuORF;REV__nc|ENSG00000113108|O95704-2|APBB3;REV__nc|ENSG00000113108|O95704-3|APBB3;REV__nc|ENSG00000113108|O95704-4|APBB3	67.49366992349736	0.29779660154124327	5				NaN	NaN	0	NaN	6486	3895	10381
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10384	30.479	NaN	5365.4	30	0	537.78	0.106				-1	 	0	70	531.8019493205976	1061.589345707995	2	531.80126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6487	3895	10381
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10385	30.481	NaN	2690.9	30	0	256.15	0.106	+			12483	GEDSKQALQQL	11	71	608.8117331098002	NaN	0	608.811279296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEDSKQALQQL_	ENSG00000143375|ENST00000271636|CGN	90.14881205920913	0.04540552048690855	5				NaN	NaN	0	NaN	6488	3895	10381
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10386	30.483	NaN	2115.7	30	0	576.78	0.106			+	25738	LRVIDEEGLA	10	63	557.8096325189069	1113.6047121046138	2	557.8094482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LRVIDEEGLA_	REV__ENST00000539808.2_15:82768988-82769599:-|nuORF	49.44154591367651	0.46214596422418036	5				NaN	NaN	0	NaN	6489	3895	10381
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10387	30.485	NaN	1329.3	30	0	180.43	0.106	+			41502	SVPKILNME	9	52	515.782276394979	NaN	0	515.7823486328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVPKILNME_	ENST00000528797.5_1_11:57413095-57413371:-|nuORF	31.529811441608018	0.3183796599642538	5				NaN	NaN	0	NaN	6490	3895	10381
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10388	30.486	NaN	1367.6	30	0	159.03	0.034			+	19128	IYLVSVDE	8	56	469.2484130859375	NaN	0	469.2484130859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IYLVSVDE_	REV__ENSG00000138002|ENST00000260570|IFT172;REV__ENST00000507184.5_1_2:27680991-27709067:-|nuORF;REV__nc|ENSG00000138002|Q9UG01-2|IFT172	35.200714571348534	1.7418937515398478	5				NaN	NaN	0	NaN	6491	3895	10381
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10399	30.51	NaN	8993.9	30	0	1485.3	0.214			+	29458	PCNMPKLAL	9	73	501.7597141218231	1001.5048753104462	2	501.75860595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_PCNM(Oxidation (M))PKLAL_	REV__ENSG00000143374|ENST00000369064|TARS2;REV__nc|ENSG00000143374|Q9BW92-2|TARS2	73.97473282117947	0.12360187025703594	5				NaN	NaN	0	NaN	6499	3898	10398
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10400	30.514	NaN	4124.7	30	0	466.75	0.106	+			5560	AVANIVNSVK	10	66	507.8017160082813	1013.5888790833626	2	507.800537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVANIVNSVK_	ENSG00000042286|ENST00000307864|AIFM2;nc|ENSG00000042286|Q9BRQ8-2|AIFM2	75.65223720490533	0.23114180991572172	5				NaN	NaN	0	NaN	6500	3898	10398
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10401	30.516	NaN	3501.6	30	0	618.91	0.106	+			18932	IVNDFAYMK	9	70	558.7739229638534	1115.5332929945066	2	558.7734985351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_IVNDFAYM(Oxidation (M))K_	ENSG00000170348|ENST00000303575|TMED10;ENST00000534816.1_1_8:146220430-146220868:+|nuORF;ENST00000555036.1_1_14:75602424-75614456:-|nuORF;ENST00000555873.1_1_14:75601590-75605782:-|nuORF;ENST00000556969.5_1_14:75601590-75614465:-|nuORF	61.691277971877994	0.19951612995419254	5				NaN	NaN	0	NaN	6501	3898	10398
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10402	30.518	NaN	3781.2	30	0	457.19	0.106	+			51135	YNKLLNNNL	9	70	553.3053788919111	1104.5962048506221	2	553.3036499023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YNKLLNNNL_	ARMC3|p.E689Kfs*5|1|0.26|ENSG00000165309|chr10:23030608-23030608|A/-|frameshift_variant;ARMC3|p.E689Rfs*20|1|0.17|ENSG00000165309|chr10:23030607-23030608|-/A|frameshift_variant;ENSG00000165309|ENST00000298032|ARMC3;nc|ENSG00000165309|Q5W041-3|ARMC3;nc|ENSG00000165309|Q5W041-4|ARMC3	45.97224482568171	0.3502073465782774	5				NaN	NaN	0	NaN	6502	3898	10398
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10403	30.519	NaN	2276	30	0	419.15	0.106				-1	 	0	41	336.5348629037366	1006.5827593114099	3	336.5340881347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6503	3898	10398
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10404	30.521	NaN	2113.4	30	0	297.8	0.035			+	42071	SYDDWEPL	8	58	512.7159363521009	1023.4173197710019	2	512.714599609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SYDDWEPL_	REV__PHKG1|p.S251L|1|0.26|ENSG00000164776|chr7:56081933-56081933|G/A|missense_variant	44.53106598305862	0.628196326904373	5				NaN	NaN	0	NaN	6504	3898	10398
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10405	30.522	NaN	2498.9	30	0	203.84	0.14	+			35851	SEDIRTEAL	9	64	517.2628201372349	1032.5110873412698	2	517.2617797851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SEDIRTEAL_	ENSG00000138771|ENST00000296043|SHROOM3	59.93077597824379	0.21419174904018318	5				NaN	NaN	0	NaN	6505	3898	10398
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10417	30.549	NaN	9389.4	30	0	1222.4	0.214				-1	 	0	69	458.28005765454367	914.5455623758874	2	458.2789306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6514	3901	10416
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10418	30.553	NaN	5580.1	30	0	628.69	0.106				-1	 	0	73	505.7334932998326	1009.4524336664653	2	506.2337341308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6515	3901	10416
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10419	30.555	NaN	3321.7	30	0	943.49	0.106				-1	 	0	56	471.2751988558474	940.5358447784948	2	471.2741394042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6516	3901	10416
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10420	30.556	NaN	1977.2	30	0	174.99	0.106	+			39	AAALFTIHK	9	60	486.28835430520013	970.5621556772003	2	486.2862854003906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AAALFTIHK_	ENSG00000061676|ENST00000361354|NCKAP1;nc|ENSG00000061676|Q9Y2A7-2|NCKAP1	62.107414245175825	0.1960472003779324	5				NaN	NaN	0	NaN	6517	3901	10416
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10421	30.558	NaN	2148.7	30	0	189.03	0.106			+	24201	LEQQQKLIE	9	62	564.8173789392469	1127.6202049452936	2	564.816162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LEQQQKLIE_	REV__ENSG00000153989|ENST00000368494|NUS1;REV__ENST00000401550.2_1_13:99262776-99262983:-|nuORF	95.81516180277367	0.04847050768394289	5				NaN	NaN	0	NaN	6518	3901	10416
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10422	30.56	NaN	1181.3	30	0	121.92	0.106			+	31296	QIGLSGPLA	9	49	428.25013279623624	NaN	0	428.2496643066406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QIGLSGPLA_	REV__COL19A1|p.G753Afs*32|1|0.15|ENSG00000082293|chr6:70156686-70156686|G/-|frameshift_variant;REV__COL19A1|p.G807Wfs*14|1|0.34|ENSG00000082293|chr6:70165952-70165953|-/C|frameshift_variant;REV__COL19A1|p.S585Afs*8|1|0.2|ENSG00000082293|chr6:70144987-70144987|A/-|frameshift_variant;REV__ENSG00000082293|ENST00000620364|COL19A1	49.44154591367651	0.21054156626303966	5				NaN	NaN	0	NaN	6519	3901	10416
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10423	30.562	NaN	2773.7	30	0	943.49	0.036			+	-1	KLSLCKVLL	9	64	537.3408918113422	1072.6672306894843	2	537.3402709960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_KLSLC(Carbamidomethyl (C))KVLL_	REV__DOCK7|p.F1091Lfs*4|1|0.38|ENSG00000116641|chr1:62539572-62539572|A/-|frameshift_variant;REV__DOCK7|p.F1836Dfs*12|1|0.05|ENSG00000116641|chr1:62477795-62477796|-/TGTC|frameshift_variant;REV__DOCK7|p.F473Lfs*8|1|0.16|ENSG00000116641|chr1:62625265-62625265|A/-|frameshift_variant;REV__ENSG00000116641|ENST00000635253|DOCK7;REV__nc|ENSG00000116641|Q96N67-2|DOCK7;REV__nc|ENSG00000116641|Q96N67-3|DOCK7;REV__nc|ENSG00000116641|Q96N67-4|DOCK7;REV__nc|ENSG00000116641|Q96N67-5|DOCK7;REV__nc|ENSG00000116641|Q96N67-6|DOCK7;REV__nc|ENSG00000116641|Q96N67-7|DOCK7	30.317721548370564	0.5199124245378496	5				NaN	NaN	0	NaN	6520	3901	10416
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10435	30.587	NaN	10897	30	0	2535.4	0.214	+			27503	MMPAFGIHP	9	69	500.7412717092608	999.4679904853216	2	500.7402648925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MMPAFGIHP_	ENSG00000182938|ENST00000328801|OTOP3;nc|ENSG00000182938|Q7RTS5|OTOP3	39.021493756699265	0.43173687394350213	5				NaN	NaN	0	NaN	6529	3904	10434
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10436	30.591	NaN	5430.7	30	0	723	0.106			+	-1	VIMLLQFP	8	66	488.7797031254417	975.5448533176834	2	488.7782287597656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_VIM(Oxidation (M))LLQFP_	REV__ENST00000522136.5_1_5:178032355-178045581:-|nuORF	54.76467175910256	0.5536104764165384	5				NaN	NaN	0	NaN	6530	3904	10434
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10437	30.593	NaN	3513	30	0	392.85	0.106	+			20530	KFIDTTSKF	9	68	543.7960817202628	1085.5776105073255	2	543.795166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KFIDTTSKF_	ENSG00000100316|ENST00000216146|RPL3;ENSG00000140986|ENST00000268661|RPL3L;ENST00000417615.1_1_14:99439218-99439536:-|nuORF;ENST00000473638.5_1_22:39708982-39709710:-|nuORF	112.2953585152457	0.026655838328212944	5				NaN	NaN	0	NaN	6531	3904	10434
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10438	30.595	NaN	3563	30	0	575	0.106	+			13990	GSCSDFQFK	9	64	538.2303172949383	1074.4460816566766	2	538.2296142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_GSC(Carbamidomethyl (C))SDFQFK_	ENSG00000124429|ENST00000262753|POF1B;nc|ENSG00000124429|Q8WVV4-1|POF1B	63.53385203322761	0.18415635464017938	5				NaN	NaN	0	NaN	6532	3904	10434
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10439	30.596	NaN	6366.8	30	0	1065	0.106				-1	 	0	64	466.26472816201124	930.5149033908225	2	466.2633361816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6533	3904	10434
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10440	30.598	NaN	2592.1	30	0	507.02	0.106				-1	 	0	31	377.7467865938604	753.4790202545208	2	377.74591064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6534	3904	10434
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10441	30.6	NaN	1571.8	30	0	146.36	0.033			+	8009	DTLRSVSL	8	57	445.75179756951246	889.489042205825	2	445.75054931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DTLRSVSL_	REV__ENST00000520639.1_1_5:153873511-153874012:+|nuORF	45.9519527083369	0.6193794311207887	5				NaN	NaN	0	NaN	6535	3904	10434
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10452	30.625	NaN	7180	30	0	739.58	0.214			+	26850	LVVRCAGVLH	10	71	533.8131629035522	1065.6117728739043	2	533.8125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LVVRCAGVLH_	REV__ENST00000236671.6_2_11:1774065-1774194:-|nuORF	85.35947970620816	0.1576417970686418	5				NaN	NaN	0	NaN	6543	3907	10451
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10453	30.629	NaN	11161	30	0	4598.1	0.106				-1	 	0	69	575.2991986357375	1148.583844338275	2	575.298095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6544	3907	10451
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10454	30.631	NaN	5024.7	30	0	819.93	0.106	+			35418	SARFVYEA	8	60	471.7384089453216	941.4622649574433	2	471.73712158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SARFVYEA_	DCAF8|p.E292Ffs*24|1|0.07|ENSG00000132716|chr1:160237221-160237222|-/CGAAT|frameshift_variant;DCAF8|p.E292Mfs*23|1|0.07|ENSG00000132716|chr1:160237220-160237221|-/AT|frameshift_variant;DCAF8L1|p.L218Ffs*18|1|0.12|ENSG00000226372|chrX:27980681-27980682|-/A|frameshift_variant;DCAF8L1|p.M258Cfs*10|1|0.41|ENSG00000226372|chrX:27980564-27980564|G/-|frameshift_variant;DCAF8L1|p.R449Gfs*6|1|0.34|ENSG00000226372|chrX:27979990-27979990|G/-|frameshift_variant;ENSG00000132716|ENST00000368074|DCAF8;ENSG00000226372|ENST00000441525|DCAF8L1;nc|ENSG00000132716|Q5TAQ9-2|DCAF8	35.61828744233558	0.6843154725607303	5				NaN	NaN	0	NaN	6545	3907	10451
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10455	30.633	NaN	3324.5	30	0	512.29	0.106				-1	 	0	63	458.28005765454367	914.5455623758874	2	458.2789001464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6546	3907	10451
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10456	30.634	NaN	1995.5	30	0	185.63	0.106			+	11897	FTTFEIYNDF	10	61	648.7912823339532	1295.5680117347063	2	649.2909545898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FTTFEIYNDF_	REV__tr|U7T401|U7T401_FUSNUPurinenucleosidephosphorylaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00191PE=3SV=1	31.529811441608018	0.6223461015008678	5				NaN	NaN	0	NaN	6547	3907	10451
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10457	30.636	NaN	1340.8	30	0	286.64	0.106	+			46810	VIAGQIVNL	9	47	463.7878156258994	925.5610783185988	2	463.7867431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VIAGQIVNL_	DOCK7|p.F1091Lfs*4|1|0.38|ENSG00000116641|chr1:62539572-62539572|A/-|frameshift_variant;DOCK7|p.F1836Dfs*12|1|0.05|ENSG00000116641|chr1:62477795-62477796|-/TGTC|frameshift_variant;ENSG00000116641|ENST00000635253|DOCK7;nc|ENSG00000116641|Q96N67-2|DOCK7;nc|ENSG00000116641|Q96N67-3|DOCK7;nc|ENSG00000116641|Q96N67-4|DOCK7;nc|ENSG00000116641|Q96N67-5|DOCK7;nc|ENSG00000116641|Q96N67-6|DOCK7	33.51558372728122	0.4900267029546261	5				NaN	NaN	0	NaN	6548	3907	10451
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10458	30.638	NaN	3180.2	30	0	738.2	0.037			+	18522	ISKVVQVCCI	10	44	383.54266551353237	1147.6061671407972	3	383.87615966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_ISKVVQVCC(Carbamidomethyl (C))I_	REV__ENST00000531771.5_1_11:85718509-85733504:-|nuORF	42.86426827375447	0.522752283233888	5				NaN	NaN	0	NaN	6549	3907	10451
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10468	30.66	NaN	3181.2	30	0	371.07	0.214	+			42941	TEIQQQSAL	9	67	509.26433545339916	1016.5141179735983	2	509.2642517089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEIQQQSAL_	ENSG00000182934|ENST00000332118|SRPRA;ENST00000528744.5_1_11:126137442-126138699:-|nuORF;nc|ENSG00000182934|P08240-2|SRPRA	81.52500206392136	0.09095445986635249	5				NaN	NaN	0	NaN	6556	3910	10467
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10469	30.664	NaN	4257.8	30	0	2013.9	0.106	+			26713	LVKGRSPCAG	10	57	494.27271249600057	986.5308720588012	2	494.27130126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LVKGRSPCAG_	ENSG00000214279|ENST00000640237|SCART1;ENST00000482993.6_3_10:135267501-135271093:+|nuORF;nc|ENSG00000214279|Q4G0T1-2|SCART1;nc|ENSG00000214279|Q4G0T1-3|SCART1	40.77816245573522	0.5419747034533848	5				NaN	NaN	0	NaN	6557	3910	10467
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10470	30.666	NaN	3340.3	30	0	921.62	0.106			+	20390	KETAGLEEGAL	11	72	559.2911431340557	1116.5677333349113	2	559.29150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KETAGLEEGAL_	REV__ENST00000458669.1_1_16:16422307-16422873:+|nuORF	98.58198989935565	0.06364242648159563	5				NaN	NaN	0	NaN	6558	3910	10467
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10471	30.667	NaN	6052.3	30	0	1562.4	0.106				-1	 	0	66	413.2641532438417	824.5137535544834	2	413.2630310058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6559	3910	10467
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10472	30.669	NaN	1566.8	30	0	194.76	0.106	+			13969	GSAQGMDSMLK	11	63	562.7582463913178	1123.5019398494355	2	562.7582397460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GSAQGMDSMLK_	ENSG00000153046|ENST00000397588|CDYL;ENST00000472453.5_1_6:4776866-4954287:+|nuORF;nc|ENSG00000153046|Q9Y232-3|CDYL;nc|ENSG00000153046|Q9Y232-4|CDYL;nc|ENSG00000153046|Q9Y232|CDYL	48.601550744091256	0.44024757269956427	5				NaN	NaN	0	NaN	6560	3910	10467
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10473	30.671	NaN	1471.4	30	0	220.76	0.038				-1	QQVRTPLCPS	10	58	593.3054472150482	1184.5963414968962	2	593.8060302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_QQVRTPLC(Carbamidomethyl (C))PS_	ENST00000429283.2_1_2:233200464-233200857:+|nuORF;ENST00000445090.5_1_2:233194598-233200857:+|nuORF	37.81151784470057	0.569310847604193	5				NaN	NaN	0	NaN	6561	3910	10467
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10474	30.672	NaN	2796.5	30	0	262.53	0.141			+	-1	MEALLQNIT	9	61	524.7713327439038	1047.5281125546076	2	524.7696533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_M(Oxidation (M))EALLQNIT_	REV__ENSG00000136758|ENST00000376016|YME1L1;REV__nc|ENSG00000136758|Q96TA2-3|YME1L1;REV__nc|ENSG00000136758|Q96TA2|YME1L1	45.97224482568171	0.3502073465782774	5				NaN	NaN	0	NaN	6562	3910	10467
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10483	30.693	NaN	6138.5	30	0	507.33	0.214	+			49532	VYANGIRNI	9	70	510.2860889744837	1018.5576250157674	2	510.2854309082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYANGIRNI_	ENSG00000145495|ENST00000274140|MARCHF6;nc|ENSG00000145495|O60337-5|MARCHF6;nc|ENSG00000145495|O60337-6|MARCHF6	109.47833844074708	0.029530294723441826	5				NaN	NaN	0	NaN	6568	3913	10482
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10484	30.697	NaN	5100.4	30	0	961.26	0.106			+	2025	AKNPYNIAL	9	75	502.2830652096117	1002.5515774860235	2	502.28216552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AKNPYNIAL_	REV__ENSG00000074755|ENST00000381638|ZZEF1	53.351449002276354	0.2690372970092375	5				NaN	NaN	0	NaN	6569	3913	10482
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10485	30.699	NaN	2658.7	30	0	624.16	0.106			+	11470	FNQHDGTL	8	51	466.2178582596398	930.4211635860796	2	466.21661376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FNQHDGTL_	REV__ENST00000350025.2_1_5:132009789-132015413:+|nuORF	42.47446043378293	0.6409579893742323	5				NaN	NaN	0	NaN	6570	3913	10482
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10486	30.701	NaN	2302.5	30	0	264.98	0.106	+			25512	LPSPVTAQKY	10	71	552.3092723203706	1102.6039917075411	2	552.3080444335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LPSPVTAQKY_	ENSG00000167658|ENST00000309311|EEF2;ENST00000598182.5_1_19:3980752-3982305:-|nuORF	61.691277971877994	0.35045824941635534	5				NaN	NaN	0	NaN	6571	3913	10482
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10487	30.703	NaN	1060.6	30	0	112.28	0.106			+	33161	RETIKVIPR	9	41	371.23433434214877	NaN	0	371.23443603515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RETIKVIPR_	REV__ENSG00000159625|ENST00000360716|DRC7;REV__nc|ENSG00000159625|Q8IY82-2|DRC7	36.446750945000026	0.29355505452396785	5				NaN	NaN	0	NaN	6572	3913	10482
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10488	30.704	NaN	1713.2	30	0	745.56	0.106	+			19336	KAKGVISG	8	39	380.2406581127929	758.4667632923858	2	380.2401123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KAKGVISG_	ENSG00000132549|ENST00000357162|VPS13B;ENST00000493587.1_1_8:100880383-100883116:+|nuORF;nc|ENSG00000132549|Q7Z7G8-6|VPS13B;nc|ENSG00000132549|Q7Z7G8|VPS13B;VPS13B|p.S3988Lfs*4|1|0.55|ENSG00000132549|chr8:99875552-99875553|-/C|frameshift_variant;VPS13B|p.S3988Pfs*25|1|0.11|ENSG00000132549|chr8:99875553-99875553|C/-|frameshift_variant	24.20275056022122	0.7724576178584145	5				NaN	NaN	0	NaN	6573	3913	10482
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10489	30.706	NaN	1817.6	30	0	455.23	0.036			+	-1	LYSICINTL	9	63	548.7868462589025	1095.559139584605	2	548.7855224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_LYSIC(Carbamidomethyl (C))INTL_	REV__ENSG00000115665|ENST00000264047|SLC5A7	34.172542307311794	0.4838870758800184	5				NaN	NaN	0	NaN	6574	3913	10482
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10500	30.73	NaN	10009	30	0	2593.9	0.214				-1	 	0	66	475.27234661231955	948.5301402914391	2	475.27093505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6582	3916	10499
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10501	30.734	NaN	3307.1	30	0	526.24	0.106	+			7488	DGEQRISL	8	53	459.2387955387022	916.4630381442045	2	459.2374267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DGEQRISL_	C3|p.A1045Pfs*26|1|0.09|ENSG00000125730|chr19:6694452-6694452|C/-|frameshift_variant;C3|p.S1008Rfs*8|3|0.41|ENSG00000125730|chr19:6694564-6694564|G/-|frameshift_variant;ENSG00000125730|ENST00000245907|C3	60.97194046774394	0.49215940876911696	5				NaN	NaN	0	NaN	6583	3916	10499
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10502	30.735	NaN	3604.6	30	0	1940.3	0.106			+	-1	VCVRVILGK	9	39	348.5518982068842	1042.6338652208526	3	348.5513000488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_VC(Carbamidomethyl (C))VRVILGK_	REV__ENST00000558165.3_1_15:76552439-76552934:-|nuORF	37.81151784470057	0.4459294069877048	5				NaN	NaN	0	NaN	6584	3916	10499
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10503	30.737	NaN	1305.5	30	0	228.69	0.106				-1	 	0	43	406.23827200745086	810.4619910817017	2	406.23748779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6585	3916	10499
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10504	30.739	NaN	3417.4	30	0	987.87	0.106	+			30827	QEENITRAL	9	67	537.2843714862827	1072.5541900393653	2	537.2836303710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QEENITRAL_	ENSG00000099817|ENST00000615234|POLR2E;ENST00000586817.5_1_19:1089487-1094188:-|nuORF	76.16968421966216	0.11411088698345859	5				NaN	NaN	0	NaN	6586	3916	10499
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10505	30.741	NaN	3433.7	30	0	1751.5	0.106	+			41201	SVLDLSVHK	9	37	333.19468901123014	996.5622376338904	3	333.19384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVLDLSVHK_	ENSG00000116731|ENST00000311066|PRDM2;nc|ENSG00000116731|Q13029-2|PRDM2;nc|ENSG00000116731|Q13029-3|PRDM2;nc|ENSG00000116731|Q13029-5|PRDM2;PRDM2|p.G1390Efs*14|1|0.21|ENSG00000116731|chr1:13781963-13781964|GG/-|frameshift_variant;PRDM2|p.N1426Ifs*3|1|0.17|ENSG00000116731|chr1:13782065-13782065|A/-|frameshift_variant;PRDM2|p.P1648Qfs*14|1|0.24|ENSG00000116731|chr1:13782731-13782731|G/-|frameshift_variant	36.446750945000026	0.4619375763483977	5				NaN	NaN	0	NaN	6587	3916	10499
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10506	30.743	NaN	5679.4	30	0	733.5	0.036	+			15196	GTSQLYVYR	9	67	543.7847001693593	1085.5548474055186	2	543.78271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GTSQLYVYR_	CPSF1|p.A1319Pfs*42|2|0.23|ENSG00000071894|chr8:144393943-144393943|C/-|frameshift_variant;CPSF1|p.P950Lfs*6|1|0.13|ENSG00000071894|chr8:144396478-144396478|G/-|frameshift_variant;CPSF1|p.V640Wfs*20|1|0.36|ENSG00000071894|chr8:144398110-144398110|G/-|frameshift_variant;ENSG00000071894|ENST00000616140|CPSF1	93.1432384553994	0.056003526918089595	5				NaN	NaN	0	NaN	6588	3916	10499
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10517	30.768	NaN	41324	30	0	6051.2	0.214	+			36833	SIFDGRVVAK	10	93	546.314905202084	1090.615257470968	2	546.3140869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIFDGRVVAK_	ENSG00000143183|ENST00000367881|TMCO1;nc|ENSG00000143183|Q9UM00-2|TMCO1;nc|ENSG00000143183|Q9UM00|TMCO1	99.01295224348159	0.08062808246117298	5				NaN	NaN	0	NaN	6596	3919	10516
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10518	30.772	NaN	3268.5	30	0	603.39	0.106	+			453	AAVGYIMEK	9	59	491.25710064681147	NaN	0	491.2569885253906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAVGYIMEK_	ENSG00000111361|ENST00000424014|EIF2B1	62.107414245175825	0.1403307765918332	5				NaN	NaN	0	NaN	6597	3919	10516
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10519	30.774	NaN	2307.1	30	0	433.06	0.106			+	11180	FGVCFLHF	8	56	513.7469253193234	1025.4792977054467	2	513.7460327148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_FGVC(Carbamidomethyl (C))FLHF_	REV__ENST00000442655.2_1_4:9032265-9032511:+|nuORF	43.626045697637714	0.6338121648150432	5				NaN	NaN	0	NaN	6598	3919	10516
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10520	30.776	NaN	1333	30	0	348.8	0.106	+			5582	AVATALGLK	9	49	422.26929746570073	842.5240419982015	2	422.2685241699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVATALGLK_	ENSG00000107819|ENST00000393459|SFXN3	66.42927471994793	0.16001998865088202	5				NaN	NaN	0	NaN	6599	3919	10516
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10521	30.778	NaN	1818.8	30	0	168.37	0.106			+	37835	SNDEEKVQGK	10	61	567.2749101335671	1132.5352673339341	2	567.2745361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SNDEEKVQGK_	REV__ENSG00000060749|ENST00000650167|QSER1;REV__nc|ENSG00000060749|Q2KHR3-2|QSER1;REV__nc|ENSG00000060749|Q2KHR3|QSER1;REV__QSER1|p.I1584*|1|0.24|ENSG00000060749|chr11:32969069-32969069|A/-|frameshift_variant;REV__QSER1|p.K1503Nfs*38|1|0.3|ENSG00000060749|chr11:32958008-32958008|A/-|frameshift_variant	42.86426827375447	0.522752283233888	5				NaN	NaN	0	NaN	6600	3919	10516
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10522	30.779	NaN	1862.2	30	0	243.96	0.106	+			37377	SLFSLWAALA	10	67	539.7997207279473	1077.5848885226944	2	539.7982788085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLFSLWAALA_	ENST00000472789.1_1_7:150936247-150937287:-|nuORF	44.116797842482775	0.5112108506279902	5				NaN	NaN	0	NaN	6601	3919	10516
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10523	30.781	NaN	1479	30	0	168.19	0.034	+			45649	TYSSIKKF	8	57	487.27041642710793	972.5262799210159	2	487.26922607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TYSSIKKF_	ENST00000514372.5_3_4:42412314-42412431:-|nuORF	26.79610172149135	0.7524337208463756	5				NaN	NaN	0	NaN	6602	3919	10516
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10531	30.799	NaN	2567.7	30	0	328.17	0.214			+	49963	WAAWSFSCL	9	57	535.7420345690764	1069.4695162049527	2	535.7413940429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WAAWSFSCL_	REV__ENST00000393389.7_1_11:82922362-82922422:+|nuORF	31.954861631926434	0.5046124803899898	5				NaN	NaN	0	NaN	6607	3922	10530
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10532	30.803	NaN	1558.8	30	0	127.92	0.106				-1	AVAAVKWVM	9	64	516.7827128295404	1031.5508727258807	2	516.7817993164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))AVAAVKWVM(Oxidation (M))_	ENSG00000198015|ENST00000549982|MRPL42	42.47446043378293	0.39123495718708534	5				NaN	NaN	0	NaN	6608	3922	10530
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10533	30.805	NaN	1444.4	30	0	137.18	0.106			+	20608	KGCSEKSSM	9	56	486.7084020699616	971.4022512067232	2	486.7065124511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_KGCSEKSSM(Oxidation (M))_	REV__ENSG00000116668|ENST00000367500|SWT1;REV__SWT1|p.T35Pfs*11|1|0.17|ENSG00000116668|chr1:185166586-185166586|A/-|frameshift_variant	51.19269402634007	0.2889735674168909	5				NaN	NaN	0	NaN	6609	3922	10530
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10534	30.807	NaN	1721.9	30	0	191.54	0.106			+	2753	ARGEKRSSRA	10	40	373.2105717253122	1116.6098857761367	3	373.2102966308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ARGEKRSSRA_	REV__ENST00000274030.10_1_4:120133964-120135229:+|nuORF;REV__ENST00000514665.1_1_4:120133964-120138775:+|nuORF	18.262085536374414	0.7236521404371882	5				NaN	NaN	0	NaN	6610	3922	10530
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10535	30.809	NaN	3566.4	30	0	319.47	0.106				-1	 	0	66	508.81711505940353	1015.6196771856071	2	508.8162841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6611	3922	10530
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10536	30.81	NaN	2430.4	30	0	285.02	0.036	+			29269	NYGDQVQHF	9	67	554.2474488468224	1106.4803447604447	2	554.2470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NYGDQVQHF_	ENSG00000154016|ENST00000284154|GRAP	75.04331003522576	0.118981335847003	5				NaN	NaN	0	NaN	6612	3922	10530
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10547	30.836	NaN	13294	30	0	2643.6	0.214				-1	 	0	68	509.2545595074017	1016.4945660816035	2	509.2534484863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6620	3925	10546
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10548	30.84	NaN	3602.4	30	0	1930.2	0.106				-1	 	0	61	521.2833545329875	1040.5521561327748	2	521.2828979492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6621	3925	10546
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10549	30.842	NaN	2860.1	30	0	264.6	0.106	+			8687	EEAFGLLPF	9	64	511.7643863300604	1021.5142197269208	2	511.76531982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EEAFGLLPF_	ENSG00000178904|ENST00000392250|DPY19L3;nc|ENSG00000178904|Q6ZPD9-2|DPY19L3	52.29916861842294	0.2778091507991977	5				NaN	NaN	0	NaN	6622	3925	10546
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10550	30.843	NaN	3260.9	30	0	1297.3	0.106	+			32349	QTYEEALYK	9	67	572.7804552904776	1143.546357647755	2	572.7794799804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QTYEEALYK_	ENSG00000106541|ENST00000419304|AGR2	56.43379154798735	0.2433427591689151	5				NaN	NaN	0	NaN	6623	3925	10546
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10551	30.845	NaN	2374.3	30	0	239.51	0.106			+	51116	YMLPQIGY	8	56	492.7472722507138	NaN	0	492.748046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YMLPQIGY_	REV__AGTPBP1|p.M780I|1|0.46|ENSG00000135049|chr9:85596445-85596445|C/T|missense_variant	54.76467175910256	1.7418937515398478	5				NaN	NaN	0	NaN	6624	3925	10546
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10552	30.847	NaN	2239	30	0	249.33	0.106				-1	VWTPQDRQC	9	55	595.2759630550427	1188.5373731768852	2	595.2747192382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_VWTPQDRQC(Carbamidomethyl (C))_	ENSG00000112159|ENST00000369393|MDN1;MDN1|p.D409Rfs*22|1|0.16|ENSG00000112159|chr6:89789788-89789789|-/G|frameshift_variant;MDN1|p.E2692*|2|0.32|ENSG00000112159|chr6:89706133-89706134|-/A|frameshift_variant;MDN1|p.F2691Lfs*7|2|0.37|ENSG00000112159|chr6:89706134-89706134|A/-|frameshift_variant;MDN1|p.K2642Nfs*17|2|0.29|ENSG00000112159|chr6:89707449-89707449|T/-|frameshift_variant;MDN1|p.L4077Cfs*15|1|0.16|ENSG00000112159|chr6:89680625-89680625|G/-|frameshift_variant;MDN1|p.L5278Ffs*6|1|0.18|ENSG00000112159|chr6:89652273-89652274|-/A|frameshift_variant	29.14955571784316	0.5308295550522326	5				NaN	NaN	0	NaN	6625	3925	10546
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10553	30.849	NaN	2458.1	30	0	228.11	0.037			+	28399	NEPSLKHVLH	10	73	587.3230442992875	1172.631535665375	2	587.3221435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NEPSLKHVLH_	REV__ENSG00000186086|ENST00000495380|NBPF6;REV__ENSG00000196427|ENST00000415641|NBPF4;REV__nc|ENSG00000186086|Q5VWK0-2|NBPF6;REV__nc|ENSG00000215864|P0C2Y1|NBPF7P;REV__nc|ENSG00000243967|Q86XG9|NBPF5P	44.377184641726394	0.5088115166961078	5				NaN	NaN	0	NaN	6626	3925	10546
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10562	30.869	NaN	3927.7	30	0	486.39	0.214	+			10469	EVPGSLYFR	9	62	534.2813798970204	1066.5482068608408	2	535.2804565429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EVPGSLYFR_	MAT1A|p.R391Gfs*50|1|0.37|ENSG00000151224|chr10:80273799-80273799|G/-|frameshift_variant	45.9519527083369	0.35044536499095585	5				NaN	NaN	0	NaN	6632	3928	10561
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10563	30.872	NaN	1930.1	30	0	375.48	0.106				-1	 	0	34	336.5348629037366	1006.5827593114099	3	336.5341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6633	3928	10561
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10564	30.874	NaN	4884.5	30	0	513.18	0.106	+			27508	MMWSMHVAK	9	67	560.7592165384505	1119.5038801437008	2	560.7590942382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MMWSMHVAK_	ENSG00000183091|ENST00000397345|NEB;ENSG00000183091|ENST00000397345|NEB;ENSG00000183091|ENST00000397345|NEB;ENSG00000183091|ENST00000397345|NEB;nc|ENSG00000183091|P20929-1|NEB;nc|ENSG00000183091|P20929-1|NEB;nc|ENSG00000183091|P20929-1|NEB;nc|ENSG00000183091|P20929-3|NEB;nc|ENSG00000183091|P20929-3|NEB;nc|ENSG00000183091|P20929-3|NEB;nc|ENSG00000183091|P20929-3|NEB;nc|ENSG00000183091|P20929-4|NEB;nc|ENSG00000183091|P20929-4|NEB;nc|ENSG00000183091|P20929-4|NEB;NEB|p.L4198Cfs*51|1|0.35|ENSG00000183091|chr2:151568357-151568357|G/-|frameshift_variant;NEB|p.L4198Cfs*51|1|0.35|ENSG00000183091|chr2:151568357-151568357|G/-|frameshift_variant;NEB|p.L4198Cfs*51|1|0.35|ENSG00000183091|chr2:151568357-151568357|G/-|frameshift_variant;NEB|p.L4198Cfs*51|1|0.35|ENSG00000183091|chr2:151568357-151568357|G/-|frameshift_variant;NEB|p.N3442Tfs*4|1|0.2|ENSG00000183091|chr2:151618297-151618297|T/-|frameshift_variant;NEB|p.N3442Tfs*4|1|0.2|ENSG00000183091|chr2:151618297-151618297|T/-|frameshift_variant;NEB|p.N3442Tfs*4|1|0.2|ENSG00000183091|chr2:151618297-151618297|T/-|frameshift_variant;NEB|p.N3442Tfs*4|1|0.2|ENSG00000183091|chr2:151618297-151618297|T/-|frameshift_variant	68.78682469695295	0.14603441672067394	5				NaN	NaN	0	NaN	6634	3928	10561
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10565	30.876	NaN	2092.4	30	0	197.08	0.106			+	45377	TVTGETGVSI	10	57	482.2544911228286	962.4944293124572	2	482.25311279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TVTGETGVSI_	REV__CTTNBP2|p.L707Wfs*54|1|0.37|ENSG00000077063|chr7:117784404-117784404|G/-|frameshift_variant;REV__CTTNBP2|p.V657Sfs*12|1|0.36|ENSG00000077063|chr7:117791230-117791230|G/-|frameshift_variant;REV__ENSG00000077063|ENST00000160373|CTTNBP2	66.42927471994793	0.3073667423445326	5				NaN	NaN	0	NaN	6635	3928	10561
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10566	30.878	NaN	1831.5	30	0	553.08	0.106	+			148	AAIAPIIAAV	10	42	455.2915985904022	NaN	0	455.2912902832031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AAIAPIIAAV_	ELAC2|p.A450Gfs*45|1|0.12|ENSG00000006744|chr17:13000230-13000230|G/-|frameshift_variant;ENSG00000006744|ENST00000338034|ELAC2;ENST00000480891.5_1_17:12896137-12909314:-|nuORF;ENST00000484122.5_1_17:12899737-12920449:-|nuORF;nc|ENSG00000006744|Q9BQ52-2|ELAC2;nc|ENSG00000006744|Q9BQ52-4|ELAC2	35.200714571348534	0.3845941098745963	5				NaN	NaN	0	NaN	6636	3928	10561
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10567	30.88	NaN	1997.8	30	0	483.26	0.106	+			11465	FNLIFINVL	9	45	364.8857897531909	1091.6355398597727	3	364.8849792480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FNLIFINVL_	ENST00000477543.1_1_15:59971734-59981480:-|nuORF	34.172542307311794	0.4838870758800184	5				NaN	NaN	0	NaN	6637	3928	10561
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10568	30.882	NaN	935.04	30	0	135.8	0.032				-1	CGSSCCSCCW	10	40	384.77191162109375	NaN	0	384.77191162109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C)	_CGSSCCSC(Carbamidomethyl (C))C(Carbamidomethyl (C))W_	ENST00000228741.7_1_12:96588285-96617411:+|nuORF	1.7563182721166617	0.4201028297492154	5				NaN	NaN	0	NaN	6638	3928	10561
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10581	30.909	NaN	2669.3	30	0	351.48	0.214	+			10300	ETPPNPSAL	9	58	463.23658967150254	924.4586264098051	2	463.23455810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ETPPNPSAL_	CAMSAP3|p.E835Rfs*154|1|0.18|ENSG00000076826|chr19:7612990-7612990|C/-|frameshift_variant;CAMSAP3|p.P438Rfs*125|1|0.39|ENSG00000076826|chr19:7611801-7611801|C/-|frameshift_variant;CAMSAP3|p.R336Gfs*42|2|0.21|ENSG00000076826|chr19:7610883-7610883|C/-|frameshift_variant;CAMSAP3|p.V883Gfs*10|1|0.45|ENSG00000076826|chr19:7613137-7613138|-/G|frameshift_variant;ENSG00000076826|ENST00000160298|CAMSAP3;nc|ENSG00000076826|Q9P1Y5-2|CAMSAP3	54.776311868738084	0.25715957988447635	5				NaN	NaN	0	NaN	6648	3931	10580
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10582	30.912	NaN	3784.7	30	0	407.14	0.106				-1	 	0	65	593.7917454022903	1185.5689378713805	2	593.7907104492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6649	3931	10580
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10583	30.914	NaN	2597	30	0	457.93	0.106			+	21257	KLLKVFHN	8	39	333.54369557299583	997.6092573191875	3	333.54339599609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KLLKVFHN_	REV__ENSG00000168152|ENST00000302236|THAP9;REV__THAP9|p.N850Mfs*7|1|0.4|ENSG00000168152|chr4:82918757-82918757|A/-|frameshift_variant	42.396135135203025	0.6414440140393314	5				NaN	NaN	0	NaN	6650	3931	10580
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10584	30.916	NaN	2594.9	30	0	331.21	0.106				-1	ENMVEDCLY	9	75	586.7312767845232	1171.4480006358463	2	586.7303466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_ENMVEDC(Carbamidomethyl (C))LY_	ENSG00000076641|ENST00000220597|PAG1	42.396135135203025	0.392153681582562	5				NaN	NaN	0	NaN	6651	3931	10580
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10585	30.918	NaN	1171.7	30	0	189.51	0.106				-1	ATVLMWPRK	9	47	373.2105717253122	1116.6098857761367	3	373.544189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_ATVLM(Oxidation (M))WPRK_	DNAH12|p.E1339Gfs*6|1|0.27|ENSG00000174844|chr3:57446125-57446126|-/C|frameshift_variant;DNAH12|p.F1712Lfs*4|1|0.34|ENSG00000174844|chr3:57428681-57428681|A/-|frameshift_variant;DNAH12|p.H2653Sfs*22|1|0.24|ENSG00000174844|chr3:57314595-57314596|-/A|frameshift_variant;DNAH12|p.K1023Nfs*9|3|0.34|ENSG00000174844|chr3:57457919-57457919|T/-|frameshift_variant;ENSG00000174844|ENST00000495027|DNAH12;nc|ENSG00000174844|Q6ZR08|DNAH12	24.519189625965996	0.574102787014149	5				NaN	NaN	0	NaN	6652	3931	10580
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10586	30.92	NaN	1811.9	30	0	245.1	0.106				-1	 	0	60	477.2937193442966	952.5728857553933	2	477.2923889160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6653	3931	10580
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10587	30.922	NaN	1023.7	30	0	81.573	0.036	+			30086	PQQPQAQQR	9	50	540.77978515625	NaN	0	540.77978515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PQQPQAQQR_	nc|ENSG00000095637|Q9BX66-10|SORBS1;nc|ENSG00000095637|Q9BX66-12|SORBS1;nc|ENSG00000095637|Q9BX66-4|SORBS1;nc|ENSG00000095637|Q9BX66-5|SORBS1;nc|ENSG00000095637|Q9BX66-6|SORBS1;nc|ENSG00000095637|Q9BX66-8|SORBS1;nc|ENSG00000095637|Q9BX66-9|SORBS1	23.04248740728303	0.3589936788096251	5				NaN	NaN	0	NaN	6654	3931	10580
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10602	30.953	NaN	11424	30	0	2200.7	0.215	+			51395	YTNGKCVIL	9	82	534.2813798970204	1066.5482068608408	2	534.2816772460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_YTNGKC(Carbamidomethyl (C))VIL_	ENSG00000071127|ENST00000499869|WDR1;ENST00000509600.1_1_4:10117520-10118290:-|nuORF;ENST00000514319.5_1_4:10110004-10118075:-|nuORF;nc|ENSG00000071127|O75083-3|WDR1	71.87747018426188	0.13267044672804276	5				NaN	NaN	0	NaN	6666	3934	10601
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10603	30.957	NaN	6929	30	0	836.5	0.106	+			3767	ATAELIMSR	9	66	496.2665330306719	990.5185131281438	2	496.265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATAELIMSR_	ENSG00000105677|ENST00000222284|TMEM147;ENST00000477168.6_1_19:36036641-36037810:+|nuORF;ENST00000595467.1_1_19:36037522-36037810:+|nuORF;nc|ENSG00000105677|Q9BVK8-2|TMEM147	141.52041321563706	0.009766778904176347	5				NaN	NaN	0	NaN	6667	3934	10601
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10604	30.959	NaN	4965.9	30	0	643.1	0.106			+	33336	RGVGLVGGLPP	11	67	511.3111979540127	1020.6078429748254	2	511.3101806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RGVGLVGGLPP_	REV__ENST00000531840.1_1_11:2416972-2417500:+|nuORF	53.351449002276354	0.38280258784255455	5				NaN	NaN	0	NaN	6668	3934	10601
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10605	30.96	NaN	1851.7	30	0	141.14	0.106	+			16353	HELQEKLSPL	10	70	597.3313254441167	1192.6480979550333	2	597.32958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HELQEKLSPL_	ENSG00000118137|ENST00000236850|APOA1	80.45461616416974	0.1919067876629769	5				NaN	NaN	0	NaN	6669	3934	10601
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10606	30.962	NaN	1764.9	30	0	254.72	0.106			+	-1	RPLTSRCF	8	56	518.7716146670309	1035.5286764008617	2	518.7715454101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_RPLTSRC(Carbamidomethyl (C))F_	REV__ENSG00000166833|ENST00000349880|NAV2;REV__NAV2|p.V2057Wfs*16|1|0.23|ENSG00000166833|chr11:20095744-20095744|G/-|frameshift_variant;REV__nc|ENSG00000166833|Q8IVL1-10|NAV2;REV__nc|ENSG00000166833|Q8IVL1-11|NAV2;REV__nc|ENSG00000166833|Q8IVL1-12|NAV2;REV__nc|ENSG00000166833|Q8IVL1-13|NAV2;REV__nc|ENSG00000166833|Q8IVL1-2|NAV2;REV__nc|ENSG00000166833|Q8IVL1-4|NAV2;REV__nc|ENSG00000166833|Q8IVL1-8|NAV2;REV__nc|ENSG00000166833|Q8IVL1-9|NAV2;REV__nc|ENSG00000166833|Q8IVL1|NAV2	31.954861631926434	0.7126016770032289	5				NaN	NaN	0	NaN	6670	3934	10601
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10607	30.964	NaN	1929	30	0	173.66	0.036				-1	KFIYGRRM	8	65	543.7960036487625	1085.577454364325	2	543.7957153320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_KFIYGRRM(Oxidation (M))_	tr|U7T8L1|U7T8L1_FUSNUPhagetailsheathproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00090PE=4SV=1	31.954861631926434	0.7126016770032289	5				NaN	NaN	0	NaN	6671	3934	10601
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10624	30.999	NaN	13001	30	0	5951.9	0.214	+			29562	PEYFRRKL	8	81	554.8172824047476	1107.6200118762952	2	554.8165893554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PEYFRRKL_	ENSG00000005100|ENST00000225296|DHX33;ENST00000575153.5_1_17:5347527-5364435:-|nuORF;nc|ENSG00000005100|Q9H6R0-2|DHX33	56.72105179125745	0.5342425954139568	5				NaN	NaN	0	NaN	6685	3937	10623
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10625	31.003	NaN	10940	30	0	2306.1	0.106	+			16634	HHITFINKV	9	48	370.2139145924446	1107.6199143775339	3	370.21307373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HHITFINKV_	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42|TTN;TTN|p.A12650Gfs*4|1|0.4|ENSG00000155657|chr2:178633489-178633490|-/T|frameshift_variant;TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;TTN|p.D20259Rfs*40|1|0.44|ENSG00000155657|chr2:178583105-178583106|-/T|frameshift_variant;TTN|p.D21555Ifs*6|1|0.33|ENSG00000155657|chr2:178576659-178576659|G/-|frameshift_variant;TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;TTN|p.D9026Afs*9|1|0.26|ENSG00000155657|chr2:178711205-178711208|CTGT/-|frameshift_variant;TTN|p.E15132Sfs*22|1|0.27|ENSG00000155657|chr2:178612094-178612094|C/-|frameshift_variant;TTN|p.E20392Dfs*6|1|0.04|ENSG00000155657|chr2:178582357-178582358|-/TTTAAAATTA|frameshift_variant;TTN|p.E20392Kfs*4|1|0.02|ENSG00000155657|chr2:178582359-178582360|-/TTTT|frameshift_variant;TTN|p.E9224Gfs*8|1|0.04|ENSG00000155657|chr2:178709697-178709698|-/TCTTATGATATCTTGAC|frameshift_variant;TTN|p.F18705Lfs*8|1|0.37|ENSG00000155657|chr2:178590687-178590687|A/-|frameshift_variant;TTN|p.G12742Vfs*2|1|0.05|ENSG00000155657|chr2:178632983-178632983|C/-|frameshift_variant;TTN|p.G14712Dfs*11|1|0.37|ENSG00000155657|chr2:178614341-178614341|G/-|frameshift_variant;TTN|p.G19920Afs*12|1|0.42|ENSG00000155657|chr2:178584961-178584961|G/-|frameshift_variant;TTN|p.G22029Efs*22|2|0.13|ENSG00000155657|chr2:178575125-178575125|T/-|frameshift_variant;TTN|p.I10495Nfs*4|1|0.37|ENSG00000155657|chr2:178685288-178685289|-/T|frameshift_variant;TTN|p.I24998Nfs*2|1|0.35|ENSG00000155657|chr2:178566216-178566217|-/T|frameshift_variant;TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;TTN|p.I9225Cfs*34|1|0.06|ENSG00000155657|chr2:178709695-178709696|-/ATATCCATGAGCA|frameshift_variant;TTN|p.K10923Rfs*104|2|0.23|ENSG00000155657|chr2:178679362-178679362|T/-|frameshift_variant;TTN|p.K11381Nfs*25|1|0.07|ENSG00000155657|chr2:178671133-178671133|T/-|frameshift_variant;TTN|p.K11556Sfs*15|1|0.39|ENSG00000155657|chr2:178652287-178652287|T/-|frameshift_variant;TTN|p.K14271Qfs*5|1|0.02|ENSG00000155657|chr2:178617351-178617352|-/G|frameshift_variant;TTN|p.K26626Nfs*34|1|0.34|ENSG00000155657|chr2:178561331-178561331|T/-|frameshift_variant;TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant;TTN|p.N13487Tfs*49|1|0.34|ENSG00000155657|chr2:178621335-178621335|T/-|frameshift_variant;TTN|p.N15496Ifs*16|1|0.09|ENSG00000155657|chr2:178610116-178610116|T/-|frameshift_variant;TTN|p.N7648Tfs*27|1|0.32|ENSG00000155657|chr2:178719598-178719598|T/-|frameshift_variant;TTN|p.N8964Tfs*27|1|0.11|ENSG00000155657|chr2:178711988-178711988|T/-|frameshift_variant;TTN|p.P16126Rfs*3|1|0.25|ENSG00000155657|chr2:178607301-178607302|TG/-|frameshift_variant;TTN|p.P22810Hfs*10|1|0.03|ENSG00000155657|chr2:178572780-178572781|-/AAAT|frameshift_variant;TTN|p.V10632Yfs*16|1|0.16|ENSG00000155657|chr2:178683254-178683254|T/-|frameshift_variant;TTN|p.V11008Sfs*13|1|0.33|ENSG00000155657|chr2:178678146-178678147|-/T|frameshift_variant;TTN|p.V11345Ffs*4|1|0.4|ENSG00000155657|chr2:178672044-178672044|T/-|frameshift_variant;TTN|p.V13823*|1|0.28|ENSG00000155657|chr2:178620027-178620027|C/-|frameshift_variant;TTN|p.V22573Cfs*4|2|0.31|ENSG00000155657|chr2:178573492-178573492|C/-|frameshift_variant;TTN|p.V27442Cfs*4|1|0.05|ENSG00000155657|chr2:178558107-178558108|-/A|frameshift_variant	19.996771675451527	0.6112419832031292	5				NaN	NaN	0	NaN	6686	3937	10623
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10626	31.005	NaN	2552.9	30	0	681.35	0.106			+	29566	PFATLNSFSPQ	11	58	604.8006057234691	1207.586658513738	2	604.7991333007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PFATLNSFSPQ_	REV__ENSG00000213676|ENST00000375203|ATF6B;REV__nc|ENSG00000213676|Q99941-2|ATF6B	33.921630207806714	0.6339809607503234	5				NaN	NaN	0	NaN	6687	3937	10623
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10627	31.006	NaN	1817	30	0	98.405	0.106			+	29489	PCSQSQLSL	9	61	481.73236083984375	NaN	0	481.73236083984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PCSQSQLSL_	REV__SPG20|p.P162Q|1|0.15|ENSG00000133104|chr13:36335346-36335346|G/T|missense_variant	45.97224482568171	0.23445038899310136	5				NaN	NaN	0	NaN	6688	3937	10623
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10628	31.008	NaN	1712	30	0	360.92	0.106			+	10420	EVIFEPTKK	9	39	364.21047059400604	1089.6095823822182	3	364.544189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EVIFEPTKK_	REV__ENST00000524061.1_1_8:10645233-10677771:-|nuORF	40.77816245573522	0.41113185337114944	5				NaN	NaN	0	NaN	6689	3937	10623
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10629	31.01	NaN	1424.2	30	0	208.05	0.035			+	31670	QNHINENE	8	56	499.21881103515625	NaN	0	499.21881103515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QNHINENE_	REV__BIN2|p.T500Hfs*24|1|0.33|ENSG00000110934|chr12:51291608-51291609|-/G|frameshift_variant;REV__ENSG00000110934|ENST00000615107|BIN2;REV__ENST00000503900.1_1_5:75207117-75207609:+|nuORF;REV__ENST00000605039.5_1_12:51675285-51695971:-|nuORF;REV__nc|ENSG00000110934|Q9UBW5-2|BIN2;REV__nc|ENSG00000110934|Q9UBW5-3|BIN2	42.396135135203025	1.7418937515398478	5				NaN	NaN	0	NaN	6690	3937	10623
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10642	31.038	NaN	1661.2	30	0	207.01	0.214	+			7217	DAISKTYSY	9	59	524.2542926121874	1046.4940322911748	2	524.2537841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DAISKTYSY_	ENSG00000140988|ENST00000343262|RPS2;ENST00000397318.4_1_X:40794237-40794825:-|nuORF;ENST00000438210.1_1_1:40428398-40429073:+|nuORF;ENST00000441047.1_1_17:51834352-51834658:-|nuORF;ENST00000443417.1_1_9:102879039-102879699:-|nuORF;ENST00000475555.1_1_4:144270430-144270667:-|nuORF;ENST00000494359.1_1_11:17250107-17250695:+|nuORF;ENST00000529806.5_1_16:2012098-2012518:-|nuORF;ENST00000532746.5_2_16:2012101-2013785:-|nuORF;ENST00000533872.5_1_16:2012101-2013018:-|nuORF;RPL18-RPS2|1|fusion	42.86426827375447	0.38666266728046506	5				NaN	NaN	0	NaN	6700	3940	10641
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10643	31.041	NaN	3839.3	30	0	1273.8	0.106			+	-1	SNERKRKM	8	30	355.5262026299854	1063.5567784901561	3	355.525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_SNERKRKM(Oxidation (M))_	REV__ENST00000349830.7_1_8:1806140-1808128:+|nuORF	30.503639358989545	0.7238069182250283	5				NaN	NaN	0	NaN	6701	3940	10641
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10644	31.043	NaN	1892.9	30	0	261.76	0.106			+	17887	IGDESGAFLF	10	65	528.2559442010129	NaN	0	528.2557373046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IGDESGAFLF_	REV__ENSG00000135541|ENST00000265602|AHI1;REV__ENST00000531788.5_1_6:135639727-135754270:-|nuORF;REV__nc|ENSG00000135541|Q8N157-2|AHI1	35.61828744233558	0.3832230071539346	5				NaN	NaN	0	NaN	6702	3940	10641
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10645	31.045	NaN	1116.5	30	0	241.55	0.106			+	-1	MRPTSWRKFF	10	45	686.3526611328125	NaN	0	686.3526611328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_M(Oxidation (M))RPTSWRKFF_	REV__DCX|p.K216Rfs*16|1|0.69|ENSG00000077279|chrX:111401291-111401291|T/-|frameshift_variant	19.1035232394073	0.4201028297492154	5				NaN	NaN	0	NaN	6703	3940	10641
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10646	31.047	NaN	1297.1	30	0	131.23	0.106	+			19380	KALVLTCQQ	9	56	502.2830652096117	1002.5515774860235	2	502.2829895019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KALVLTCQQ_	ENSG00000204174|ENST00000374312|NPY4R;ENSG00000264717|ENST00000576178|NPY4R2	47.657333605630114	0.33044192980041115	5				NaN	NaN	0	NaN	6704	3940	10641
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10647	31.049	NaN	950.53	30	0	173.19	0.035			+	30718	QDIAHNVEN	9	45	520.2431243361652	1038.4716957391304	2	520.2424926757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QDIAHNVEN_	REV__LRRC1|p.R519Q|1|0.5|ENSG00000137269|chr6:53922774-53922774|G/A|missense_variant	31.529811441608018	0.5085848003137583	5				NaN	NaN	0	NaN	6705	3940	10641
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10658	31.075	NaN	1532	30	0	256.47	0.214	+			33600	RLPGAHLQ	8	50	446.26196821226205	890.5093834913241	2	446.2607116699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RLPGAHLQ_	ENSG00000149451|ENST00000356518|ADAM33;nc|ENSG00000149451|Q9BZ11-2|ADAM33;nc|ENSG00000149451|Q9BZ11-3|ADAM33	38.80614096846853	0.6637206697844082	5				NaN	NaN	0	NaN	6713	3943	10657
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10659	31.078	NaN	2855.8	30	0	292.68	0.106	+			28310	NEFEATQKL	9	67	540.2727401128262	1078.5309272924524	2	540.2725830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NEFEATQKL_	ENSG00000165030|ENST00000297689|NFIL3	96.0336014099291	0.047854655524928534	5				NaN	NaN	0	NaN	6714	3943	10657
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10660	31.08	NaN	2489.2	30	0	687.03	0.106	+			36414	SETPTFAKV	9	59	490.25985175261144	978.5051505720229	2	490.2590026855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SETPTFAKV_	CDT1|p.Q285Sfs*33|1|0.46|ENSG00000167513|chr16:88806036-88806036|C/-|frameshift_variant;ENSG00000167513|ENST00000301019|CDT1	85.16082228582465	0.07850854922700509	5				NaN	NaN	0	NaN	6715	3943	10657
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10661	31.082	NaN	1091	30	0	115.82	0.106			+	30560	QALRGPEL	8	38	442.2546804681934	882.4948080031868	2	442.25335693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QALRGPEL_	REV__ENSG00000183735|ENST00000331710|TBK1;REV__TBK1|p.I397Nfs*5|1|0.2|ENSG00000183735|chr12:64484493-64484494|-/A|frameshift_variant	47.657333605630114	0.6087971902037268	5				NaN	NaN	0	NaN	6716	3943	10657
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10662	31.084	NaN	1377.8	30	0	113.16	0.106	+			51272	YRNPFAIY	8	53	522.2677108438631	NaN	0	522.26806640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YRNPFAIY_	ENSG00000184350|ENST00000389832|MRGPRE;MRGPRE|p.Q208Sfs*103|1|0.15|ENSG00000184350|chr11:3228178-3228178|G/-|frameshift_variant	45.9519527083369	1.7418937515398478	5				NaN	NaN	0	NaN	6717	3943	10657
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10663	31.085	NaN	1527.9	30	0	234.96	0.106	+			13149	GGPLGTAKLQ	10	47	471.2753100187317	940.5360671042635	2	471.2738342285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GGPLGTAKLQ_	ENSG00000179532|ENST00000254579|DNHD1;ENST00000529821.5_1_11:6587803-6593213:+|nuORF;ENST00000530197.5_1_11:6587352-6593213:+|nuORF	32.81241826257853	0.6118718159329168	5				NaN	NaN	0	NaN	6718	3943	10657
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10664	31.087	NaN	1674.3	30	0	438.2	0.036	+			48466	VTLQPAGMKI	10	37	353.2060241699219	NaN	0	353.2060241699219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VTLQPAGMKI_	ENST00000397977.7_1_8:19674673-19674787:+|nuORF	29.170058357718403	0.40439580130713204	5				NaN	NaN	0	NaN	6719	3943	10657
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10676	31.113	NaN	3375	30	0	325.21	0.212			+	33512	RKNYEHSKIQ	10	83	651.8503032779441	1301.6860536226882	2	651.8480834960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RKNYEHSKIQ_	REV__CENPF|p.E663K|1|0.42|ENSG00000117724|chr1:214640325-214640325|G/A|missense_variant	53.08895987439943	0.42869529153390606	5				NaN	NaN	0	NaN	6728	3946	10675
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10677	31.116	NaN	1599.8	30	0	213.51	0.106				-1	TYMGHTGAVW	10	63	569.7539064482918	1137.4932599633835	2	569.7529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_TYM(Oxidation (M))GHTGAVW_	ENSG00000084623|ENST00000677711|EIF3I;ENST00000474371.1_1_1:32688150-32694122:+|nuORF;ENST00000489353.5_1_1:32688042-32691823:+|nuORF	34.172542307311794	0.6007644933930345	5				NaN	NaN	0	NaN	6729	3946	10675
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10678	31.118	NaN	2670	30	0	308.41	0.106				-1	EAVKLCDSY	9	66	542.7536635399621	1083.492774146724	2	543.2542724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_EAVKLC(Carbamidomethyl (C))DSY_	ENSG00000125944|ENST00000302271|HNRNPR;HNRNPR|p.L367Qfs*19|1|0.05|ENSG00000125944|chr1:23313620-23313621|-/TTTAATCTCT|frameshift_variant;HNRNPR|p.W594Gfs*15|1|0.23|ENSG00000125944|chr1:23310575-23310576|CA/-|frameshift_variant;nc|ENSG00000125944|O43390-2|HNRNPR;nc|ENSG00000125944|O43390-3|HNRNPR;nc|ENSG00000125944|O43390-4|HNRNPR	49.44154591367651	0.3095138337212152	5				NaN	NaN	0	NaN	6730	3946	10675
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10679	31.12	NaN	2446.5	30	0	375.5	0.106	+			50655	YEDSLLDHCI	10	62	604.268246873334	1206.5219408134678	2	604.266845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YEDSLLDHCI_	ENSG00000101695|ENST00000217740|RNF125;ENST00000580209.1_1_18:29617215-29646074:+|nuORF;ENST00000583184.1_1_18:29598826-29691722:+|nuORF	45.9519527083369	0.4943008177357963	5				NaN	NaN	0	NaN	6731	3946	10675
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10680	31.122	NaN	1948.2	30	0	212.77	0.038			+	-1	FHMAIVATFF	10	63	600.2990742461259	NaN	0	600.298583984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_FHM(Oxidation (M))AIVATFF_	REV__ENSG00000166961|ENST00000405633|MS4A15;REV__nc|ENSG00000166961|Q8N5U1-2|MS4A15;REV__nc|ENSG00000166961|Q8N5U1-3|MS4A15	37.15910966729921	0.3781637092648983	5				NaN	NaN	0	NaN	6732	3946	10675
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10687	31.14	NaN	2903.2	30	0	299.27	0.214	+			37392	SLGAFVTLQR	10	66	546.314905202084	1090.615257470968	2	546.31396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLGAFVTLQR_	nc|ENSG00000131095|P14136-2|GFAP	54.776311868738084	0.41334902933431344	5				NaN	NaN	0	NaN	6736	3949	10686
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10688	31.143	NaN	3647.5	30	0	306.61	0.106	+			26987	LYMKNGQGF	9	73	529.2614662123275	1056.508379491455	2	529.2605590820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LYMKNGQGF_	ENSG00000116473|ENST00000369709|RAP1A;ENSG00000127314|ENST00000250559|RAP1B;ENST00000494982.1_1_1:112233982-112249293:+|nuORF;nc|ENSG00000127314|P61224-3|RAP1B;nc|ENSG00000127314|P61224-4|RAP1B;nc|ENSG00000254893|A6NIZ1|RAP1BL	63.30626980617807	0.18605348971131092	5				NaN	NaN	0	NaN	6737	3949	10686
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10689	31.145	NaN	1919.4	30	0	290.35	0.106			+	15743	GVSGKPGPL	9	42	406.2381678762326	810.4617828192652	2	406.23724365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GVSGKPGPL_	REV__COL4A1|p.G1369Rfs*33|1|0.53|ENSG00000187498|chr13:110164908-110164909|-/G|frameshift_variant;REV__COL4A1|p.P1437Qfs*12|2|0.09|ENSG00000187498|chr13:110162382-110162382|G/-|frameshift_variant;REV__ENSG00000187498|ENST00000375820|COL4A1	51.33545320467046	0.2872990594074956	5				NaN	NaN	0	NaN	6738	3949	10686
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10690	31.147	NaN	6074.2	30	0	2463.4	0.106			+	25257	LNLMISFHK	9	56	373.5388856519872	1117.5948275561616	3	373.53814697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_LNLM(Oxidation (M))ISFHK_	REV__ENST00000568855.1_1_16:70265056-70269235:-|nuORF	52.936696900407355	0.27249468807391813	5				NaN	NaN	0	NaN	6739	3949	10686
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10691	31.149	NaN	1420.8	30	0	208.48	0.106			+	9882	EQKGILAGIV	10	57	514.3119543861309	1026.6093558390617	2	514.8112182617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EQKGILAGIV_	REV__ENSG00000168090|ENST00000303904|COPS6;REV__ENST00000465027.1_1_7:99686972-99687407:+|nuORF;REV__ENST00000496358.1_1_7:99686670-99688376:+|nuORF	31.529811441608018	0.6223461015008678	5				NaN	NaN	0	NaN	6740	3949	10686
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10692	31.151	NaN	1040.2	30	0	87.945	0.034	+			6501	AWVVYGVI	8	39	453.7573997578217	905.5002465824434	2	453.7557067871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AWVVYGVI_	tr|U7T2I9|U7T2I9_FUSNUC4-dicarboxylateanaerobiccarrierOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00720PE=4SV=1	24.504012794735996	0.7701314986472447	5				NaN	NaN	0	NaN	6741	3949	10686
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10700	31.169	NaN	5994.1	30	0	720.39	0.214				-1	MPPRISSI	8	68	458.74897500686245	915.4833970805249	2	458.7480773925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))PPRISSI_	ENST00000300403.10_1_20:30345217-30345373:+|nuORF	55.50420428727701	0.5462892107279674	5				NaN	NaN	0	NaN	6746	3952	10699
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10701	31.173	NaN	8367	30	0	1595.5	0.106			+	38306	SRAPHAVAIH	10	77	529.7968565337652	1057.5791601343303	2	529.7963256835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SRAPHAVAIH_	REV__ENST00000259486.10_1_8:120613639-120620170:-|nuORF	42.396135135203025	0.5270658956260207	5				NaN	NaN	0	NaN	6747	3952	10699
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10702	31.175	NaN	11220	30	0	1683.6	0.106			+	-1	LTTRVKMQK	9	82	560.8283212948363	1119.6420896564725	2	560.8279418945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_LTTRVKM(Oxidation (M))QK_	REV__ENSG00000147394|ENST00000695776|ZNF185;REV__nc|ENSG00000147394|O15231-3|ZNF185;REV__nc|ENSG00000147394|O15231-4|ZNF185;REV__nc|ENSG00000147394|O15231-6|ZNF185;REV__nc|ENSG00000147394|O15231-7|ZNF185;REV__nc|ENSG00000147394|O15231-8|ZNF185;REV__nc|ENSG00000147394|O15231|ZNF185	27.882242232435846	0.5426732730940306	5				NaN	NaN	0	NaN	6748	3952	10699
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10703	31.176	NaN	3984.9	30	0	291.31	0.106				-1	 	0	65	503.2680130342615	502.2607365676615	1	503.26788330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6749	3952	10699
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10704	31.178	NaN	4134.8	30	0	1717.9	0.106	+			12024	FYALIPCLL	9	63	526.7975381305669	1051.5805233279336	2	526.796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FYALIPCLL_	ENSG00000174564|ENST00000329582|IL20RB	39.021493756699265	0.43173687394350213	5				NaN	NaN	0	NaN	6750	3952	10699
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10705	31.18	NaN	3414.9	30	0	1004.9	0.106	+			13322	GKKRGPPGSKD	11	36	376.21333073332875	NaN	0	376.21337890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GKKRGPPGSKD_	ENSG00000143479|ENST00000367109|DYRK3;nc|ENSG00000143479|O43781-2|DYRK3	18.531049691330335	0.456735970842152	5				NaN	NaN	0	NaN	6751	3952	10699
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10706	31.182	NaN	2545.5	30	0	647.56	0.038			+	13416	GLGGMKKV	8	49	395.2355132738953	788.4564736145907	2	395.9046325683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GLGGMKKV_	REV__ENSG00000122971|ENST00000242592|ACADS;REV__ENST00000539690.1_1_12:121163604-121175022:+|nuORF	8.231297230196988	0.7812220690224883	5				NaN	NaN	0	NaN	6752	3952	10699
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10715	31.203	NaN	4448.3	30	0	363.87	0.214	+			12791	GELTGEVRM	9	60	496.2483527574673	990.4821525817346	2	496.24713134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GELTGEVRM_	ENSG00000128591|ENST00000325888|FLNC;FLNC|p.H2471Tfs*58|1|0.18|ENSG00000128591|chr7:128856767-128856767|C/-|frameshift_variant;FLNC|p.V1896Wfs*57|1|0.04|ENSG00000128591|chr7:128851472-128851472|G/-|frameshift_variant;nc|ENSG00000128591|Q14315-2|FLNC	61.691277971877994	0.19951612995419254	5				NaN	NaN	0	NaN	6758	3955	10714
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10716	31.207	NaN	3248.9	30	0	743.09	0.106	+			11002	FEHCNFNDVT	10	63	641.7630608943821	1281.511568855564	2	641.761962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_FEHC(Carbamidomethyl (C))NFNDVT_	ENSG00000085063|ENST00000642928|CD59;nc|ENSG00000284969|P13987-2|CD59	58.2462437865262	0.38179041844353556	5				NaN	NaN	0	NaN	6759	3955	10714
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10717	31.209	NaN	2815.3	30	0	1117	0.106				-1	LCFWEVQY	8	69	572.759366844538	1143.504180755876	2	572.7584838867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LC(Carbamidomethyl (C))FWEVQY_	ENSG00000181045|ENST00000361193|SLC26A11	28.2542754592877	0.7411748056684583	5				NaN	NaN	0	NaN	6760	3955	10714
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10718	31.211	NaN	3394.9	30	0	334.3	0.106	+			33114	REMRHKLKT	9	72	599.8448093973816	1197.675065861563	2	599.8434448242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_REMRHKLKT_	ENSG00000092201|ENST00000216297|SUPT16H;ENST00000537175.1_1_12:16553022-16553157:-|nuORF	29.170058357718403	0.5306379469863586	5				NaN	NaN	0	NaN	6761	3955	10714
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10719	31.213	NaN	1395.8	30	0	101.36	0.106	+			36006	SEIDQINKV	9	56	523.2807594098568	1044.5469658865136	2	523.2798461914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SEIDQINKV_	ENSG00000008128|ENST00000404249|CDK11A;ENSG00000248333|ENST00000341832|CDK11B;ENST00000356937.7_1_1:1634348-1635645:-|nuORF;ENST00000463652.5_1_1:1635130-1635691:-|nuORF;nc|ENSG00000008128|Q9UQ88-10|CDK11A;nc|ENSG00000008128|Q9UQ88-3|CDK11A;nc|ENSG00000008128|Q9UQ88-4|CDK11A;nc|ENSG00000008128|Q9UQ88-5|CDK11A;nc|ENSG00000008128|Q9UQ88|CDK11A;nc|ENSG00000248333|P21127-10|CDK11B;nc|ENSG00000248333|P21127-12|CDK11B;nc|ENSG00000248333|P21127-3|CDK11B;nc|ENSG00000248333|P21127-4|CDK11B;nc|ENSG00000248333|P21127-5|CDK11B;nc|ENSG00000248333|P21127-6|CDK11B;nc|ENSG00000248333|P21127-8|CDK11B;nc|ENSG00000248333|P21127-9|CDK11B;nc|ENSG00000248333|P21127|CDK11B	93.1432384553994	0.056003526918089595	5				NaN	NaN	0	NaN	6762	3955	10714
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10720	31.214	NaN	1124.9	30	0	142.78	0.106			+	35495	SATQDLPPVLA	11	49	556.304330779894	1110.594108626588	2	556.3045043945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SATQDLPPVLA_	REV__ADGRG4|p.D2874Rfs*16|1|0.45|ENSG00000156920|chrX:136403281-136403282|-/A|frameshift_variant;REV__ADGRG4|p.F2955Vfs*21|1|0.32|ENSG00000156920|chrX:136405894-136405895|-/G|frameshift_variant;REV__ADGRG4|p.N1783Kfs*3|1|0.45|ENSG00000156920|chrX:136349048-136349049|-/A|frameshift_variant;REV__ADGRG4|p.P2406Lfs*10|1|0.85|ENSG00000156920|chrX:136361525-136361525|C/-|frameshift_variant;REV__ADGRG4|p.R1598Qfs*86|1|0.06|ENSG00000156920|chrX:136348492-136348493|-/C|frameshift_variant;REV__ENSG00000156920|ENST00000394143|ADGRG4;REV__nc|ENSG00000156920|Q8IZF6-2|ADGRG4;REV__nc|ENSG00000156920|Q8IZF6-3|ADGRG4	26.69291269510374	0.70980431218767	5				NaN	NaN	0	NaN	6763	3955	10714
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10721	31.216	NaN	1363.7	30	0	221.99	0.034			+	17407	IAREDLDV	8	46	465.74906264882566	929.4835723644513	2	465.747802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IAREDLDV_	REV__ENSG00000125944|ENST00000302271|HNRNPR;REV__ENST00000490652.1_1_1:23664940-23670745:-|nuORF;REV__HNRNPR|p.L367Qfs*19|1|0.05|ENSG00000125944|chr1:23313620-23313621|-/TTTAATCTCT|frameshift_variant;REV__HNRNPR|p.W594Gfs*15|1|0.23|ENSG00000125944|chr1:23310575-23310576|CA/-|frameshift_variant;REV__nc|ENSG00000125944|O43390-2|HNRNPR;REV__nc|ENSG00000125944|O43390-3|HNRNPR	40.5726180659479	0.6527593143185008	5				NaN	NaN	0	NaN	6764	3955	10714
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10731	31.238	NaN	8780.6	30	0	656.52	0.214				-1	 	0	64	458.280046530543	914.545540127886	2	458.2789001464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6771	3958	10730
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10732	31.241	NaN	2869.6	30	0	594.3	0.106	+			30690	QCSKYSILQ	9	61	535.2723821906769	1068.5302114481538	2	535.2711791992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QCSKYSILQ_	ENST00000524297.5_1_5:163781227-163969217:+|nuORF	74.1650062923329	0.12277912660386392	5				NaN	NaN	0	NaN	6772	3958	10730
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10733	31.243	NaN	4113.2	30	0	621.04	0.106	+			14377	GTAGNGWFNK	10	77	526.2525236651175	1050.4904943970348	2	526.2516479492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTAGNGWFNK_	ENST00000525241.1_1_11:35211476-35226207:+|nuORF;ENST00000534296.5_1_11:35211476-35226207:+|nuORF	98.58198989935565	0.0819402597096128	5				NaN	NaN	0	NaN	6773	3958	10730
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10734	31.245	NaN	2153	30	0	647.59	0.106			+	27770	MRKGQVVM	8	56	482.7549873785406	NaN	0	482.754638671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_MRKGQVVM(Oxidation (M))_	REV__nc|ENSG00000166473|Q7Z442-2|PKD1L2;REV__nc|ENSG00000166473|Q7Z442|PKD1L2	40.5726180659479	1.7418937515398478	5				NaN	NaN	0	NaN	6774	3958	10730
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10735	31.247	NaN	1726.6	30	0	278.53	0.106			+	587	ADLEERLI	8	53	479.7634406372526	NaN	0	479.76312255859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ADLEERLI_	REV__tr|U7SNB1|U7SNB1_FUSNURNApolymerasesigmafactorSigAOS=FusobacteriumnucleatumCTI-5OX=1316586GN=sigAPE=3SV=1	49.44154591367651	1.7418937515398478	5				NaN	NaN	0	NaN	6775	3958	10730
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10736	31.249	NaN	2166.8	30	0	236.73	0.035			+	29845	PLARSRWF	8	58	516.7904977708862	1031.5664426085723	2	516.7889404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PLARSRWF_	REV__ENSG00000144649|ENST00000430121|GASK1A;REV__ENST00000434206.1_1_3:43020805-43095327:+|nuORF	49.44154591367651	0.597725784090933	5				NaN	NaN	0	NaN	6776	3958	10730
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10746	31.271	NaN	6728.1	30	0	774.28	0.214	+			34790	RYLEGTSCI	9	64	549.766502206446	NaN	0	549.7664184570312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_RYLEGTSC(Carbamidomethyl (C))I_	ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1	75.04331003522576	0.0883683072398826	5				NaN	NaN	0	NaN	6783	3961	10745
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10747	31.274	NaN	2366.2	30	0	279.92	0.106	+			13029	GEVLRTNQF	9	62	532.2795792986195	1062.544605664039	2	532.2806396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEVLRTNQF_	ENSG00000125991|ENST00000348547|ERGIC3;nc|ENSG00000125991|Q9Y282-3|ERGIC3	46.45678178249821	0.34452392205506005	5				NaN	NaN	0	NaN	6784	3961	10745
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10748	31.276	NaN	3101.3	30	0	469.83	0.106				-1	 	0	43	336.534875618206	1006.5827974548181	3	336.5341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6785	3961	10745
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10749	31.278	NaN	1755.2	30	0	200.68	0.035			+	38302	SRAAMAGPEGA	11	59	509.2406588355986	NaN	0	509.2396545410156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SRAAMAGPEGA_	REV__ENST00000536794.6_1_17:982067-982175:-|nuORF	52.936696900407355	0.2942262773185686	5				NaN	NaN	0	NaN	6786	3961	10745
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10766	31.313	NaN	11202	30	0	1558.8	0.214			+	19150	IYPFFQNE	8	71	529.2524562345207	1056.4903595358412	2	529.2513427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IYPFFQNE_	REV__ENST00000553314.1_1_12:56814492-56814858:-|nuORF	82.30502934623384	0.30436709589983096	5				NaN	NaN	0	NaN	6800	3964	10765
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10767	31.316	NaN	3744.5	30	0	764.31	0.106	+			15773	GVTDVVITR	9	60	480.28073600176623	958.5469190703325	2	480.279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GVTDVVITR_	ENSG00000181396|ENST00000313056|OGFOD3;nc|ENSG00000181396|Q6PK18-2|OGFOD3	88.17693792209575	0.07000514020414955	5				NaN	NaN	0	NaN	6801	3964	10765
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10768	31.318	NaN	2580.4	30	0	1009.2	0.106	+			454	AAVHTPVL	8	49	404.24073058710354	806.4669082410071	2	404.2394714355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AAVHTPVL_	ENST00000565010.1_1_16:602435-603513:+|nuORF	49.21078951299608	0.5991576752473486	5				NaN	NaN	0	NaN	6802	3964	10765
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10769	31.32	NaN	4513.3	30	0	1232.8	0.106			+	-1	DLWCGKKVL	9	60	373.5388856519872	1117.5948275561616	3	373.8725280761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_DLWC(Carbamidomethyl (C))GKKVL_	REV__ACVR2B|p.G148Afs*40|1|0.19|ENSG00000114739|chr3:38478209-38478209|G/-|frameshift_variant;REV__ENSG00000114739|ENST00000352511|ACVR2B;REV__ENST00000465020.5_1_3:38495813-38519975:+|nuORF	26.69291269510374	0.5537881896960711	5				NaN	NaN	0	NaN	6803	3964	10765
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10770	31.322	NaN	4209.4	30	0	338.57	0.106				-1	EVSMCRSPVP	10	73	560.7592165384505	1119.5038801437008	2	561.2618408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_EVSM(Oxidation (M))CRSPVP_	NCAPH2|p.V229M|1|0.29|ENSG00000025770|chr22:50518687-50518687|G/A|missense_variant	41.42661286455405	0.5359995577334734	5				NaN	NaN	0	NaN	6804	3964	10765
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10771	31.324	NaN	2535.6	30	0	341.36	0.035				-1	 	0	45	336.534875618206	1006.5827974548181	3	336.53399658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6805	3964	10765
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10772	31.324	NaN	3095.7	30	0	1010.3	0.138	+			10446	EVLPEAST	8	51	423.2172814764866	844.4200100197733	2	423.2159423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EVLPEAST_	ENSG00000130589|ENST00000467148|HELZ2;HELZ2|p.G2213Vfs*22|1|0.14|ENSG00000130589|chr20:63561876-63561876|C/-|frameshift_variant;HELZ2|p.P1310Rfs*32|1|0.09|ENSG00000130589|chr20:63564893-63564893|G/-|frameshift_variant;HELZ2|p.R2206Vfs*29|2|0.28|ENSG00000130589|chr20:63561898-63561898|G/-|frameshift_variant;nc|ENSG00000130589|Q9BYK8-2|HELZ2;nc|ENSG00000130589|Q9BYK8|HELZ2	52.29916861842294	0.578018602984656	5				NaN	NaN	0	NaN	6806	3964	10765
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10783	31.349	NaN	7843.6	30	0	5221.2	0.214				-1	 	0	45	350.2074911892326	698.4004294452652	2	350.2068786621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6814	3967	10782
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10784	31.353	NaN	6682.5	30	0	1023.5	0.106				-1	 	0	71	458.26746276199975	914.5203725907995	2	458.266357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6815	3967	10782
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10785	31.355	NaN	1701.1	30	0	562.56	0.106				-1	APEVLEGA	8	48	414.2119296133378	826.4093062934757	2	414.2109680175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))APEVLEGA_	ACVR2A|p.G473Dfs*3|1|0.76|ENSG00000121989|chr2:147927149-147927149|G/-|frameshift_variant;ACVR2A|p.K437Rfs*5|12|0.58|ENSG00000121989|chr2:147926117-147926117|A/-|frameshift_variant;ACVR2A|p.N376H|1|0.23|ENSG00000121989|chr2:147923021-147923021|A/C|missense_variant;ACVR2A|p.R438Efs*19|1|0.34|ENSG00000121989|chr2:147926116-147926117|-/A|frameshift_variant;BMPR2|p.E672Kfs*28|1|0.3|ENSG00000204217|chr2:202555675-202555675|A/-|frameshift_variant;BMPR2|p.I540Lfs*24|2|0.36|ENSG00000204217|chr2:202555279-202555279|A/-|frameshift_variant;BMPR2|p.K457Nfs*17|1|0.13|ENSG00000204217|chr2:202542401-202542401|A/-|frameshift_variant;BMPR2|p.M418Efs*29|1|0.21|ENSG00000204217|chr2:202532707-202532708|TA/-|frameshift_variant;BMPR2|p.N442Tfs*32|1|0.3|ENSG00000204217|chr2:202542357-202542357|A/-|frameshift_variant;BMPR2|p.N583Kfs*6|1|0.17|ENSG00000204217|chr2:202555406-202555407|-/A|frameshift_variant;BMPR2|p.N583Tfs*44|12|0.43|ENSG00000204217|chr2:202555407-202555407|A/-|frameshift_variant;ENSG00000114739|ENST00000352511|ACVR2B;ENSG00000121989|ENST00000241416|ACVR2A;ENSG00000204217|ENST00000374580|BMPR2;ENST00000465020.5_1_3:38519799-38524820:+|nuORF;nc|ENSG00000121989|P27037-2|ACVR2A;nc|ENSG00000204217|Q13873-2|BMPR2	28.2542754592877	0.7411748056684583	5				NaN	NaN	0	NaN	6816	3967	10782
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10786	31.357	NaN	3154.8	30	0	272.22	0.106			+	1158	AENEEEEEL	9	67	546.2211200366318	1090.4276871400634	2	546.2202758789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AENEEEEEL_	REV__PEG3|p.D1361N|1|0.1|ENSG00000198300|chr19:56814361-56814361|C/T|missense_variant	63.30626980617807	0.18605348971131092	5				NaN	NaN	0	NaN	6817	3967	10782
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10787	31.359	NaN	2445.4	30	0	518.46	0.106	+			48937	VVEGSFVYK	9	59	514.2782162216362	1026.5418795100722	2	514.2772216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVEGSFVYK_	ENSG00000203879|ENST00000447750|GDI1;ENST00000491154.1_1_X:153666748-153668487:+|nuORF;GDI1|p.G114D|1|0.12|ENSG00000203879|chrX:154439093-154439093|G/A|missense_variant	47.657333605630114	0.33044192980041115	5				NaN	NaN	0	NaN	6818	3967	10782
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10788	31.36	NaN	756.96	30	0	136.15	0.033	+			15864	GYGGSANSF	9	43	430.18292236328125	NaN	0	430.18292236328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GYGGSANSF_	ENSG00000135829|ENST00000367549|DHX9;ENST00000485081.5_1_1:182847108-182856566:+|nuORF;nc|ENSG00000135829|Q08211-2|DHX9	40.77816245573522	0.2702456086868081	5				NaN	NaN	0	NaN	6819	3967	10782
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10789	31.361	NaN	1820.7	30	0	235.44	0.139	+			17394	IAPPLIAFGA	10	64	485.2911138934616	968.5676748537232	2	485.7910461425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IAPPLIAFGA_	ENSG00000140853|ENST00000688547|NLRC5;nc|ENSG00000140853|Q86WI3-2|NLRC5;nc|ENSG00000140853|Q86WI3-3|NLRC5;nc|ENSG00000140853|Q86WI3-4|NLRC5;nc|ENSG00000140853|Q86WI3-5|NLRC5;nc|ENSG00000140853|Q86WI3-6|NLRC5;NLRC5|p.H1717Ifs*29|2|0.41|ENSG00000140853|chr16:57079112-57079112|C/-|frameshift_variant;NLRC5|p.K611Rfs*3|1|0.42|ENSG00000140853|chr16:57026773-57026773|A/-|frameshift_variant;NLRC5|p.P816Rfs*30|1|0.28|ENSG00000140853|chr16:57031430-57031430|C/-|frameshift_variant	44.53106598305862	0.5073935772121767	5				NaN	NaN	0	NaN	6820	3967	10782
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10805	31.396	NaN	14578	30	0	2484.4	0.214				-1	 	0	60	372.2026969523964	742.3908409715929	2	372.2015686035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6833	3970	10804
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10806	31.4	NaN	22496	30	0	3221.5	0.106				-1	KKEEYMKK	8	85	550.2938953859701	1098.5732378387402	2	550.2933959960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_KKEEYM(Oxidation (M))KK_	ENSG00000070047|ENST00000264555|PHRF1;nc|ENSG00000070047|Q9P1Y6-3|PHRF1	68.78682469695295	0.41700713582915416	5				NaN	NaN	0	NaN	6834	3970	10804
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10807	31.402	NaN	16118	30	0	1974.3	0.106	+			3558	ASTLTYHVRR	10	82	602.3337693669334	1202.6529858006668	2	602.3325805664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASTLTYHVRR_	ENSG00000085274|ENST00000349841|MYNN;nc|ENSG00000085274|Q9NPC7-2|MYNN;nc|ENSG00000085274|Q9NPC7-3|MYNN	82.24051045832904	0.17731618517892733	5				NaN	NaN	0	NaN	6835	3970	10804
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10808	31.403	NaN	9978.6	30	0	752.7	0.106				-1	 	0	66	466.25909904976595	930.5036451663319	2	466.2579650878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6836	3970	10804
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10809	31.405	NaN	2941.1	30	0	253.06	0.106	+			935	AEILQESRM	9	64	538.7753955115212	1075.5362380898423	2	538.7736206054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEILQESRM_	ENSG00000171530|ENST00000380377|TBCA;ENST00000436520.1_1_X:33059580-33059835:+|nuORF;nc|ENSG00000171530|O75347-2|TBCA	70.39856735676683	0.13906523160059378	5				NaN	NaN	0	NaN	6837	3970	10804
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10810	31.407	NaN	3388.6	30	0	199.78	0.035				-1	LVKMLCIGP	9	66	495.2800839848273	988.5456150364546	2	495.2782897949219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_LVKM(Oxidation (M))LCIGP_	ENST00000495275.1_1_1:173792913-173793066:-|nuORF	57.81127852772723	0.2318599694398087	5				NaN	NaN	0	NaN	6838	3970	10804
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10811	31.408	NaN	2778.7	30	0	238.37	0.14	+			8929	EEVSNLKTL	9	60	516.7833672072419	1031.5521814812837	2	516.7826538085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EEVSNLKTL_	ENSG00000155506|ENST00000518297|LARP1;LARP1|p.D583Tfs*12|1|0.38|ENSG00000155506|chr5:154802262-154802262|G/-|frameshift_variant;nc|ENSG00000155506|Q6PKG0-3|LARP1	41.42661286455405	0.403525789677298	5				NaN	NaN	0	NaN	6839	3970	10804
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10825	31.439	NaN	2403	30	0	159.97	0.214	+			4904	ATQILSVPK	9	58	478.79344456213107	955.5723361910622	2	478.792236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATQILSVPK_	nc|ENSG00000120802|P42166|TMPO	77.53327743719008	0.1082147015697554	5				NaN	NaN	0	NaN	6850	3973	10824
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10826	31.443	NaN	1377.7	30	0	94.328	0.106				-1	EATRMNVVTS	10	39	375.183519346195	NaN	0	375.1837463378906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_EATRM(Oxidation (M))NVVTS_	ENSG00000173805|ENST00000347901|HAP1;nc|ENSG00000173805|P54257-3|HAP1;nc|ENSG00000173805|P54257-4|HAP1;nc|ENSG00000173805|P54257|HAP1	29.170058357718403	0.40439580130713204	5				NaN	NaN	0	NaN	6851	3973	10824
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10827	31.445	NaN	1801	30	0	161.49	0.106			+	2376	ANGPVEFTI	9	60	474.246826171875	NaN	0	474.246826171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ANGPVEFTI_	REV__ENSG00000136682|ENST00000259199|ZNG1B;REV__ENSG00000147996|ENST00000382405|ZNG1E;REV__ENSG00000172785|ENST00000356521|ZNG1A;REV__ENSG00000196873|ENST00000360171|ZNG1C;REV__ENST00000358604.7_1_2:114196636-114253317:+|nuORF;REV__ENST00000382436.3_9:42674366-42714533:+|nuORF;REV__ENST00000456188.5_1_2:114214762-114253317:+|nuORF;REV__ENST00000460896.1_9:42685444-42714533:+|nuORF;REV__ENST00000468417.1_1_2:114239754-114251622:+|nuORF;REV__ENST00000479583.5_1_2:114228547-114253317:+|nuORF;REV__ENST00000486387.2_9:42689759-42714533:+|nuORF;REV__ENST00000487575.6_1_9:121469-150531:-|nuORF;REV__nc|ENSG00000172785|Q9BRT8-2|ZNG1A;REV__nc|ENSG00000172785|Q9BRT8-3|ZNG1A;REV__nc|ENSG00000196873|Q5JTY5-2|ZNG1C;REV__nc|ENSG00000215126|Q5RIA9-3|ZNG1E	64.20726635412375	0.13137488984569443	5				NaN	NaN	0	NaN	6852	3973	10824
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10828	31.446	NaN	1685.7	30	0	213.69	0.106			+	20540	KFLDEPLQP	9	57	543.7960036487625	1085.577454364325	2	543.794677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KFLDEPLQP_	REV__ENSG00000132953|ENST00000255305|XPO4;REV__XPO4|p.C1022Afs*8|1|0.21|ENSG00000132953|chr13:20787582-20787582|A/-|frameshift_variant	60.11826168202944	0.21262886028301267	5				NaN	NaN	0	NaN	6853	3973	10824
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10829	31.448	NaN	1686.7	30	0	169.92	0.106	+			49915	VYVATRPTI	9	55	510.29856797833776	1018.5825830234755	2	510.2971496582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VYVATRPTI_	ENSG00000166002|ENST00000298966|SMCO4	44.377184641726394	0.36891676396732553	5				NaN	NaN	0	NaN	6854	3973	10824
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10830	31.45	NaN	985.03	30	0	119.71	0.034			+	19070	IYHLSCSN	8	45	468.7141512417433	NaN	0	468.71484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IYHLSCSN_	REV__ENSG00000178773|ENST00000319518|CPNE7;REV__ENSG00000196353|ENST00000429747|CPNE4;REV__nc|ENSG00000178773|Q9UBL6|CPNE7;REV__nc|ENSG00000196353|Q96A23-2|CPNE4	45.9519527083369	1.7418937515398478	5				NaN	NaN	0	NaN	6855	3973	10824
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10831	31.451	NaN	1649.6	30	0	173.22	0.14	+			24007	LEDAGVREL	9	62	501.2673562749268	1000.5201596166536	2	501.7676086425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LEDAGVREL_	ENSG00000023191|ENST00000354420|RNH1;ENST00000525522.5_1_11:494693-499199:-|nuORF;ENST00000525701.5_1_11:494693-500690:-|nuORF	50.033510581677724	0.3025703251535696	5				NaN	NaN	0	NaN	6856	3973	10824
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10844	31.48	NaN	6958.3	30	0	640.27	0.214	+			10638	EYNTVASKF	9	77	529.7610789214128	1057.5076049096256	2	529.7604370117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EYNTVASKF_	ENSG00000173193|ENST00000474629|PARP14;ENST00000475640.1_1_3:122437249-122439770:+|nuORF;nc|ENSG00000173193|Q460N5-1|PARP14;nc|ENSG00000173193|Q460N5-3|PARP14;nc|ENSG00000173193|Q460N5-4|PARP14;nc|ENSG00000173193|Q460N5-5|PARP14	85.16082228582465	0.07850854922700509	5				NaN	NaN	0	NaN	6866	3976	10843
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10845	31.484	NaN	1907.1	30	0	376.03	0.106			+	33656	RNCPVWAAVL	10	60	564.8046446905416	1127.5947364478832	2	564.8037719726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RNCPVWAAVL_	REV__ENST00000432334.1_1_20:19738553-19780289:+|nuORF	42.396135135203025	0.5270658956260207	5				NaN	NaN	0	NaN	6867	3976	10843
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10846	31.486	NaN	2196.2	30	0	233.3	0.106				-1	 	0	52	385.2328185823916	768.4510842315832	2	385.23187255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6868	3976	10843
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10847	31.488	NaN	2910	30	0	186.27	0.106			+	13891	GRFGGREGRFN	11	70	626.8184319959684	1251.6223110587366	2	626.8172607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GRFGGREGRFN_	REV__ENSG00000145388|ENST00000388822|METTL14	41.42661286455405	0.5384226294179143	5				NaN	NaN	0	NaN	6869	3976	10843
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10848	31.489	NaN	1682.8	30	0	196.14	0.106	+			24008	LEDAGVREL	9	55	501.2673562749268	1000.5201596166536	2	501.26678466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LEDAGVREL_	ENSG00000023191|ENST00000354420|RNH1;ENST00000525522.5_1_11:494693-499199:-|nuORF;ENST00000525701.5_1_11:494693-500690:-|nuORF	58.2462437865262	0.22823408064396822	5				NaN	NaN	0	NaN	6870	3976	10843
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10849	31.491	NaN	2782.1	30	0	244.82	0.106			+	20561	KFRNTLAEI	9	73	546.314905202084	1090.615257470968	2	546.3140869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KFRNTLAEI_	REV__UACA|p.K370T|1|0.18|ENSG00000137831|chr15:70676515-70676515|T/G|missense_variant	44.116797842482775	0.37197099687881774	5				NaN	NaN	0	NaN	6871	3976	10843
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10850	31.493	NaN	1054	30	0	251.22	0.032				-1	GASCCPCCCC	10	41	412.11001390684453	NaN	0	412.2494201660156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	5 Carbamidomethyl (C)	_GASCC(Carbamidomethyl (C))PC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))_	ENSG00000183307|ENST00000331437|TMEM121B	7.3997283801893845	0.4201028297492154	5				NaN	NaN	0	NaN	6872	3976	10843
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10864	31.522	NaN	8196.4	30	0	1298.4	0.214				-1	AENFIFSYM	9	81	569.2487855163051	1136.4830180994102	2	569.2479248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_AENFIFSYM(Oxidation (M))_	ENSG00000065923|ENST00000616978|SLC9A7;ENSG00000198689|ENST00000630721|SLC9A6;nc|ENSG00000065923|Q96T83|SLC9A7;nc|ENSG00000198689|Q92581-1|SLC9A6;nc|ENSG00000198689|Q92581-3|SLC9A6;nc|ENSG00000198689|Q92581|SLC9A6	56.72105179125745	0.24094814563026265	5				NaN	NaN	0	NaN	6883	3979	10863
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10865	31.526	NaN	5980.9	30	0	486.81	0.106	+			9434	EKKQLCVLQ	9	77	544.8096750944113	1087.6047972556225	2	544.8085327148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EKKQLCVLQ_	CENPF|p.S2957Afs*6|1|0.52|ENSG00000117724|chr1:214657310-214657310|A/-|frameshift_variant;ENSG00000117724|ENST00000366955|CENPF	74.1650062923329	0.12277912660386392	5				NaN	NaN	0	NaN	6884	3979	10863
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10866	31.528	NaN	4311.2	30	0	2700.6	0.106				-1	 	0	57	485.27294141566284	968.5313298981257	2	485.2709655761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6885	3979	10863
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10867	31.529	NaN	5892.3	30	0	673.56	0.106	+			18007	IIFEFFVQN	9	77	578.804750615155	1155.5949482971098	2	578.8032836914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IIFEFFVQN_	CELSR2-KIAA1324|1|fusion;ENSG00000116299|ENST00000369939|ELAPOR1;ENST00000490758.6_1_1:109656894-109730836:+|nuORF;ENST00000527996.5_1_1:109656894-109745573:+|nuORF;nc|ENSG00000116299|Q6UXG2-2|ELAPOR1;nc|ENSG00000116299|Q6UXG2-3|ELAPOR1;nc|ENSG00000116299|Q6UXG2-4|ELAPOR1	67.49366992349736	0.1516260258713357	5				NaN	NaN	0	NaN	6886	3979	10863
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10868	31.531	NaN	3844.4	30	0	687.95	0.106	+			1331	AETILKNNI	9	60	508.2937422601265	1014.5729315870531	2	508.2931213378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AETILKNNI_	ENSG00000124214|ENST00000371856|STAU1;nc|ENSG00000124214|O95793-2|STAU1;nc|ENSG00000124214|O95793-3|STAU1	79.71258880314673	0.09879134589249085	5				NaN	NaN	0	NaN	6887	3979	10863
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10869	31.533	NaN	2450.2	30	0	327.01	0.038	+			15992	HAMGVWLASSM	11	62	611.2739522960023	1220.5333516588046	2	611.2725219726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Oxidation (M)	_HAM(Oxidation (M))GVWLASSM(Oxidation (M))_	LTR1_dup85|chr7:101629186-101629993:-|1.8197208364654407|0.0003248618387484|12.45|329.0|33|3|anti-sense	56.72105179125745	0.35272424613657194	5				NaN	NaN	0	NaN	6888	3979	10863
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10870	31.534	NaN	1697.4	30	0	179.74	0.141			+	47490	VQGLSLGPSIF	11	65	559.3182099746921	NaN	0	559.3182983398438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VQGLSLGPSIF_	REV__ENST00000472839.6_1_12:92819564-92822903:+|nuORF	32.75053402867276	0.4194607570143992	5				NaN	NaN	0	NaN	6889	3979	10863
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10881	31.559	NaN	3679.2	30	0	294.67	0.214			+	16630	HHFSLFLR	8	58	528.7911364551278	1055.5677199770555	2	528.790283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HHFSLFLR_	REV__HERV1_I-int_dup2|chr3:34679996-34686397:+|1.0948245018220069|0.0565463038051543|4.28|448.0|241|1|anti-sense	50.0245360154114	0.5941082100236891	5				NaN	NaN	0	NaN	6897	3982	10880
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10882	31.563	NaN	2588	30	0	426.71	0.106			+	-1	EGGIVIDEALM	11	59	581.7871405191437	1161.5597281050873	2	581.785888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_EGGIVIDEALM(Oxidation (M))_	REV__tr|U7SNJ0|U7SNJ0_FUSNUPhosphoglucosaminemutaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=glmMPE=3SV=1	25.57405402267927	0.7215402271931856	5				NaN	NaN	0	NaN	6898	3982	10880
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10883	31.565	NaN	3259.9	30	0	368.71	0.106				-1	 	0	54	432.6989816866265	863.383410440053	2	432.6978454589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6899	3982	10880
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10884	31.567	NaN	2587.2	30	0	346.59	0.106	+			27977	MVMAHLVN	8	57	457.7333576641537	913.4521623951074	2	457.7322692871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MVMAHLVN_	ENSG00000188559|ENST00000202677|RALGAPA2;nc|ENSG00000188559|Q2PPJ7-2|RALGAPA2;nc|ENSG00000188559|Q2PPJ7-3|RALGAPA2;RALGAPA2|p.G1450Dfs*10|1|0.09|ENSG00000188559|chr20:20513020-20513020|C/-|frameshift_variant;RALGAPA2|p.L1495Rfs*46|1|0.07|ENSG00000188559|chr20:20512885-20512885|A/-|frameshift_variant	57.452649787351945	0.526999880452039	5				NaN	NaN	0	NaN	6900	3982	10880
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10885	31.568	NaN	2359.3	30	0	160.89	0.106	+			197	AALDWVTKK	9	66	516.2976649383588	NaN	0	516.2974243164062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AALDWVTKK_	ENSG00000227057|ENST00000374617|WDR46;ENST00000488944.5_1_6:33255341-33255794:-|nuORF	66.42927471994793	0.121898005645852	5				NaN	NaN	0	NaN	6901	3982	10880
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10886	31.57	NaN	2525.1	30	0	260.13	0.106	+			38962	SSRFEGSIL	9	60	498.2619663542891	994.5093797753782	2	498.2615051269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSRFEGSIL_	CUL9|p.T559I|1|0.35|ENSG00000112659|chr6:43187807-43187807|C/T|missense_variant	44.116797842482775	0.37197099687881774	5				NaN	NaN	0	NaN	6902	3982	10880
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10887	31.572	NaN	2529.8	30	0	231.68	0.037	+			34806	RYLEKPMEI	9	70	589.8163880961189	1177.6182232590377	2	589.8157958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RYLEKPMEI_	ENSG00000168610|ENST00000264657|STAT3;nc|ENSG00000168610|P40763-2|STAT3;nc|ENSG00000168610|P40763-3|STAT3;STAT3|p.R729Afs*3|2|0.33|ENSG00000168610|chr17:42316861-42316861|G/-|frameshift_variant	53.08895987439943	0.27122541748218487	5				NaN	NaN	0	NaN	6903	3982	10880
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10899	31.598	NaN	4402.4	30	0	621.76	0.214	+			1221	AEQKVEYTL	9	68	540.7832328766294	1079.5519128200588	2	540.7823486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEQKVEYTL_	ENSG00000114867|ENST00000346169|EIF4G1;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;ENST00000460829.5_1_3:184046782-184052693:+|nuORF;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1	81.52500206392136	0.09095445986635249	5				NaN	NaN	0	NaN	6912	3985	10898
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10900	31.602	NaN	5496.5	30	0	523.82	0.106			+	50884	YFNIAEKY	8	67	524.2602796496176	1046.506006366035	2	524.2593994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YFNIAEKY_	REV__tr|U7T133|U7T133_FUSNUAAA-ATPase-likedomain-containingprotein(Fragment)OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00786PE=4SV=1	45.9519527083369	0.6193794311207887	5				NaN	NaN	0	NaN	6913	3985	10898
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10901	31.604	NaN	3211.9	30	0	390.75	0.106	+			7799	DPHTVTVSM	9	59	493.73500783763177	985.4554627420636	2	493.73382568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DPHTVTVSM_	BRD8|p.G620Wfs*10|1|0.17|ENSG00000112983|chr5:138164101-138164102|-/A|frameshift_variant;BRD8|p.P1065Lfs*29|1|0.14|ENSG00000112983|chr5:138149724-138149724|G/-|frameshift_variant;ENSG00000112983|ENST00000254900|BRD8;nc|ENSG00000112983|Q9H0E9-2|BRD8;nc|ENSG00000112983|Q9H0E9-3|BRD8;nc|ENSG00000112983|Q9H0E9-4|BRD8	73.97473282117947	0.12360187025703594	5				NaN	NaN	0	NaN	6914	3985	10898
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10902	31.605	NaN	2191.2	30	0	168.81	0.106			+	37303	SLDEATVALF	10	55	533.2764707059331	1064.538388478666	2	533.2734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLDEATVALF_	REV__ENSG00000088280|ENST00000336689|ASAP3;REV__nc|ENSG00000088280|Q8TDY4-3|ASAP3	47.657333605630114	0.47858658696240314	5				NaN	NaN	0	NaN	6915	3985	10898
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10903	31.607	NaN	2217.2	30	0	522.86	0.106			+	8853	EEPEPDRSSV	10	62	572.759366844538	1143.504180755876	2	572.7578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EEPEPDRSSV_	REV__ENST00000518852.5_1_8:22298373-22298820:+|nuORF	25.57405402267927	0.6709832231498071	5				NaN	NaN	0	NaN	6916	3985	10898
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10904	31.609	NaN	1219.3	30	0	726.57	0.106				-1	 	0	35	322.1942336119611	642.3739142907223	2	322.1934814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6917	3985	10898
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10905	31.611	NaN	1613.1	30	0	147.29	0.034	+			44051	TPQHGVLPP	9	51	473.2617445848853	NaN	0	473.2621154785156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TPQHGVLPP_	ENST00000538936.6_2_17:79862156-79862276:-|nuORF	37.15910966729921	0.2899585034171616	5				NaN	NaN	0	NaN	6918	3985	10898
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10919	31.64	NaN	6565.3	30	0	1694.3	0.214			+	6785	CFLMRYTY	8	73	548.7520507705614	1095.4895486079226	2	548.75146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CFLMRYTY_	REV__ENSG00000168546|ENST00000524240|GFRA2;REV__ENST00000306793.4_1_8:21550792-21640469:-|nuORF;REV__nc|ENSG00000168546|O00451-2|GFRA2;REV__nc|ENSG00000168546|O00451-3|GFRA2	62.97842346883844	0.4722955155785405	5				NaN	NaN	0	NaN	6929	3988	10918
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10920	31.643	NaN	4235.9	30	0	527.89	0.106				-1	QLLKMKQQL	9	68	573.3384672445944	1144.6623815559888	2	573.3378295898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_QLLKM(Oxidation (M))KQQL_	ENST00000421745.6_1_2:32696141-32696189:+|nuORF	30.503639358989545	0.5181749237905803	5				NaN	NaN	0	NaN	6930	3988	10918
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10921	31.645	NaN	2368.7	30	0	421.48	0.106	+			4545	ATLCYKAV	8	54	463.244809873333	924.475066813466	2	463.2435302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_ATLC(Carbamidomethyl (C))YKAV_	ENSG00000167861|ENST00000425042|HID1;HID1|p.L141Wfs*62|1|0.54|ENSG00000167861|chr17:74963048-74963048|G/-|frameshift_variant;HID1|p.P773Lfs*8|1|0.17|ENSG00000167861|chr17:74951619-74951619|G/-|frameshift_variant;nc|ENSG00000167861|Q8IV36-2|HID1	40.5726180659479	0.6527593143185008	5				NaN	NaN	0	NaN	6931	3988	10918
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10922	31.647	NaN	4197.7	30	0	374.79	0.106	+			26351	LTAHAIIGY	9	64	479.770817445966	NaN	0	479.77069091796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LTAHAIIGY_	tr|U7T596|U7T596_FUSNUhistidinekinaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00490PE=4SV=1	50.0245360154114	0.20652386741182333	5				NaN	NaN	0	NaN	6932	3988	10918
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10923	31.649	NaN	2113	30	0	175.98	0.106	+			6513	AYAPPPHVI	9	60	482.76552405876464	NaN	0	482.76507568359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AYAPPPHVI_	ENSG00000128335|ENST00000358502|APOL2	60.403631409065575	0.14759742458823122	5				NaN	NaN	0	NaN	6933	3988	10918
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10924	31.651	NaN	2843.5	30	0	670.98	0.034	+			48965	VVGAVVFQK	9	64	473.7904696155978	945.5663862979956	2	474.2908020019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VVGAVVFQK_	ENSG00000169223|ENST00000303127|LMAN2;ENST00000504071.1_1_5:176759089-176761465:-|nuORF;ENST00000515209.5_1_5:176759089-176761331:-|nuORF	73.97473282117947	0.12360187025703594	5				NaN	NaN	0	NaN	6934	3988	10918
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10932	31.671	NaN	4059	30	0	976.7	0.214	+			36010	SEIDTNQNSL	10	68	560.7595677167574	NaN	0	560.7593994140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEIDTNQNSL_	DAB2|p.F398Lfs*15|1|0.36|ENSG00000153071|chr5:39382765-39382765|A/-|frameshift_variant;ENSG00000153071|ENST00000320816|DAB2;nc|ENSG00000153071|P98082-3|DAB2	92.23892857375223	0.045399032405053316	5				NaN	NaN	0	NaN	6939	3991	10931
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10933	31.674	NaN	2404	30	0	235.27	0.106	+			28186	NAQQVQIHQ	9	63	533.2764707059331	1064.538388478666	2	533.7789306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NAQQVQIHQ_	ENSG00000172530|ENST00000682872|BANP;nc|ENSG00000172530|Q8N9N5-2|BANP;nc|ENSG00000172530|Q8N9N5-3|BANP;nc|ENSG00000172530|Q8N9N5-4|BANP;nc|ENSG00000172530|Q8N9N5-5|BANP;nc|ENSG00000172530|Q8N9N5-6|BANP;nc|ENSG00000172530|Q8N9N5-7|BANP;nc|ENSG00000172530|Q8N9N5|BANP	30.503639358989545	0.5181749237905803	5				NaN	NaN	0	NaN	6940	3991	10931
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10934	31.676	NaN	4210.7	30	0	404.07	0.106			+	27474	MLSSREGY	8	62	479.717979376103	957.421405819006	2	479.71636962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))LSSREGY_	REV__ENST00000413699.5_1_3:23958684-23959420:+|nuORF;REV__ENST00000435882.5_1_3:23958674-23959417:+|nuORF	53.351449002276354	0.5676011784961348	5				NaN	NaN	0	NaN	6941	3991	10931
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10935	31.678	NaN	2750.6	30	0	281.2	0.106	+			50456	YAEMGTRTF	9	68	538.2482461610697	1074.4819393889393	2	538.2481689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YAEMGTRTF_	ENSG00000102595|ENST00000376747|UGGT2;ENST00000467305.1_1_13:96637506-96665674:-|nuORF;nc|ENSG00000102595|Q9NYU1-2|UGGT2;UGGT2|p.N1268Ifs*10|1|0.3|ENSG00000102595|chr13:95859613-95859613|T/-|frameshift_variant	95.81516180277367	0.04847050768394289	5				NaN	NaN	0	NaN	6942	3991	10931
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10936	31.68	NaN	1882.3	30	0	453.46	0.106	+			11194	FHHLGKRI	8	37	336.534875618206	1006.5827974548181	3	336.5339050292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FHHLGKRI_	ENSG00000152595|ENST00000361056|MEPE;nc|ENSG00000152595|Q9NQ76-2|MEPE	13.775330524044264	0.789990904165365	5				NaN	NaN	0	NaN	6943	3991	10931
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10937	31.682	NaN	2033.5	30	0	112.97	0.106	+			26914	LYCQLIKQTN	10	71	612.3260551390993	1222.6375573449984	2	612.3258056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LYCQLIKQTN_	ENSG00000145555|ENST00000513610|MYO10;nc|ENSG00000145555|Q9HD67-3|MYO10	37.81151784470057	0.569310847604193	5				NaN	NaN	0	NaN	6944	3991	10931
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10938	31.683	NaN	1275	30	0	163.75	0.036	+			9536	ELDKLRNEV	9	60	558.3062438865798	NaN	0	558.3056030273438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ELDKLRNEV_	CLIP1|p.E1250D|1|0.32|ENSG00000130779|chr12:122279043-122279043|C/A|missense_variant	36.31764250033197	0.294206896222586	5				NaN	NaN	0	NaN	6945	3991	10931
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10952	31.713	NaN	9330.8	30	0	4123.8	0.214				-1	 	0	52	350.2074911892326	698.4004294452652	2	350.2066345214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6956	3994	10951
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10953	31.717	NaN	5237	30	0	699.42	0.106	+			27317	MHFRTHSG	8	62	486.72752273116674	971.4404925291335	2	486.7262268066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MHFRTHSG_	ENSG00000177888|ENST00000367405|ZBTB41;ENST00000467322.1_1_1:197128491-197145097:-|nuORF;ZBTB41|p.D754Tfs*3|1|0.04|ENSG00000177888|chr1:197159829-197159830|-/AGAATGT|frameshift_variant;ZBTB41|p.D754Vfs*8|1|0.04|ENSG00000177888|chr1:197159828-197159829|-/GTTA|frameshift_variant	38.80614096846853	0.6637206697844082	5				NaN	NaN	0	NaN	6957	3994	10951
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10954	31.719	NaN	3406.7	30	0	1207.6	0.106	+			17904	IGGHEGLEL	9	56	462.74244374240465	NaN	0	462.74212646484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IGGHEGLEL_	CHD1|p.A616Gfs*13|1|0.09|ENSG00000153922|chr5:98893560-98893561|-/GATATTATGTTTAGTGGGAATAAACC|frameshift_variant;CHD1|p.E1321Kfs*22|3|0.3|ENSG00000153922|chr5:98870705-98870705|T/-|frameshift_variant;CHD1|p.E1321Rfs*17|1|0.48|ENSG00000153922|chr5:98870704-98870705|-/T|frameshift_variant;CHD1|p.V947Tfs*15|1|0.21|ENSG00000153922|chr5:98882003-98882004|CT/-|frameshift_variant;ENSG00000153922|ENST00000614616|CHD1;nc|ENSG00000153922|O14646-2|CHD1	60.29395666154354	0.1480651883005104	5				NaN	NaN	0	NaN	6958	3994	10951
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10955	31.72	NaN	1003	30	0	112	0.106	+			40508	STYNPSISLK	10	53	555.2966112376154	1108.5786695420306	2	555.2957153320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STYNPSISLK_	ENST00000477171.1_1_3:152017595-152017766:+|nuORF	42.33807565288922	0.5276008846745733	5				NaN	NaN	0	NaN	6959	3994	10951
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10956	31.722	NaN	1273.7	30	0	148.96	0.106	+			12139	GAIAAIMQK	9	49	451.76066363977657	901.5067743463532	2	451.7593994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GAIAAIMQK_	ENSG00000132383|ENST00000254719|RPA1;RPA1|p.N274Mfs*5|1|0.18|ENSG00000132383|chr17:1879272-1879272|A/-|frameshift_variant	106.41520541750704	0.03265588207292361	5				NaN	NaN	0	NaN	6960	3994	10951
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10957	31.724	NaN	1128.6	30	0	136.24	0.035	+			18146	ILLTGRDEP	9	52	507.28340387587303	NaN	0	507.2835388183594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ILLTGRDEP_	ENST00000318348.8_1_12:110288958-110289000:-|nuORF	35.61828744233558	0.29773779453147337	5				NaN	NaN	0	NaN	6961	3994	10951
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10970	31.752	NaN	7945.3	30	0	1033.5	0.215				-1	PTGTGKTLCL	10	79	524.2781737428829	1046.5417945525658	2	524.277587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_PTGTGKTLC(Carbamidomethyl (C))L_	ENSG00000258366|ENST00000360203|RTEL1;ENST00000488316.1_1_20:62290755-62293122:+|nuORF;nc|ENSG00000258366|Q9NZ71-2|RTEL1;nc|ENSG00000258366|Q9NZ71-4|RTEL1;nc|ENSG00000258366|Q9NZ71-7|RTEL1;nc|ENSG00000258366|Q9NZ71-8|RTEL1;nc|ENSG00000258366|Q9NZ71|RTEL1	42.86426827375447	0.522752283233888	5				NaN	NaN	0	NaN	6971	3997	10969
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10971	31.755	NaN	4510.9	30	0	631.94	0.106			+	-1	NCILDWFDDW	10	61	692.2871767648014	1382.5598005964027	2	692.2853393554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_NC(Carbamidomethyl (C))ILDWFDDW_	REV__ENSG00000170881|ENST00000303545|RNF139;REV__RNF139|p.R559Lfs*60|1|0.18|ENSG00000170881|chr8:124487325-124487325|G/-|frameshift_variant	24.519189625965996	0.6795976720565101	5				NaN	NaN	0	NaN	6972	3997	10969
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10972	31.757	NaN	4964.5	30	0	715.97	0.106				-1	 	0	66	496.76248903764116	991.5104251420823	2	496.7613525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6973	3997	10969
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10973	31.759	NaN	3226.3	30	0	384.66	0.106	+			35473	SATETCYTY	9	64	548.2200890646561	1094.4256251961122	2	548.2196044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_SATETC(Carbamidomethyl (C))YTY_	ENSG00000132465|ENST00000254801|JCHAIN	68.78682469695295	0.14603441672067394	5				NaN	NaN	0	NaN	6974	3997	10969
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10974	31.761	NaN	3992.3	30	0	570.22	0.106	+			25820	LSDGEKVLV	9	65	480.2749446520455	958.5353363708911	2	480.2736511230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSDGEKVLV_	ENSG00000147432|ENST00000289957|CHRNB3	56.72105179125745	0.24094814563026265	5				NaN	NaN	0	NaN	6975	3997	10969
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10975	31.763	NaN	2809.9	30	0	399.62	0.106	+			36496	SEYDRGVNTF	10	70	594.2712760257313	1186.5279991182624	2	594.27001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SEYDRGVNTF_	ENSG00000143106|ENST00000271308|PSMA5;ENST00000484563.1_1_1:109955653-109968973:-|nuORF	79.48907831485694	0.19979514868675113	5				NaN	NaN	0	NaN	6976	3997	10969
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10976	31.765	NaN	2873.4	30	0	1518.2	0.034				-1	 	0	51	462.28801680127134	922.5614806693427	2	462.2869873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6977	3997	10969
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10984	31.783	NaN	4000.5	30	0	596.18	0.214	+			9584	ELKDRLQY	8	65	532.7913969837799	1063.5682410343597	2	532.79052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ELKDRLQY_	nc|ENSG00000090863|Q92896-2|GLG1;nc|ENSG00000090863|Q92896-3|GLG1	71.29570347882199	0.39610197767395533	5				NaN	NaN	0	NaN	6982	4000	10983
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10985	31.786	NaN	3777.1	30	0	622.2	0.106	+			1322	AETEPIVKM	9	65	509.26865881568466	1016.5227646981693	2	509.268310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AETEPIVKM_	ENSG00000104408|ENST00000220849|EIF3E;ENST00000518442.5_1_8:109247181-109261015:-|nuORF	90.36981228632155	0.0638227155548745	5				NaN	NaN	0	NaN	6983	4000	10983
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10986	31.789	NaN	4797.7	30	0	874.57	0.106	+			1141	AEMAQNAVRL	10	62	551.7883023211139	1101.5620517090276	2	551.7881469726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEMAQNAVRL_	ENSG00000168036|ENST00000349496|CTNNB1	168.25843898104137	0.00423919869411965	5				NaN	NaN	0	NaN	6984	4000	10983
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10987	31.79	NaN	1638.7	30	0	143.7	0.106	+			11226	FIEDPTPA	8	47	445.2180070540068	888.4214611748137	2	445.2167663574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FIEDPTPA_	ENSG00000184313|ENST00000421030|MROH7;ENST00000440217.5_1_1:55136488-55151982:+|nuORF;MROH7|p.R1167Efs*23|1|0.13|ENSG00000184313|chr1:54702676-54702676|A/-|frameshift_variant;nc|ENSG00000184313|Q68CQ1-1|MROH7;nc|ENSG00000184313|Q68CQ1-2|MROH7;nc|ENSG00000184313|Q68CQ1-8|MROH7;nc|ENSG00000184313|Q68CQ1-9|MROH7	35.200714571348534	0.6875396545722289	5				NaN	NaN	0	NaN	6985	4000	10983
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10988	31.792	NaN	1935.9	30	0	366.23	0.106				-1	KSLLATMKT	9	60	504.7906178859975	1007.566682838795	2	504.7897033691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_KSLLATM(Oxidation (M))KT_	ENSG00000096696|ENST00000379802|DSP;nc|ENSG00000096696|P15924-2|DSP;nc|ENSG00000096696|P15924-3|DSP	52.936696900407355	0.27249468807391813	5				NaN	NaN	0	NaN	6986	4000	10983
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10989	31.794	NaN	2586.7	30	0	222.94	0.106	+			43896	TNFEDRNAF	9	63	557.252557395988	1112.490561858776	2	557.2527465820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TNFEDRNAF_	CYFIP1|p.K121Nfs*2|1|0.14|ENSG00000273749|chr15:22944582-22944582|T/-|frameshift_variant;CYFIP2|p.Q484Rfs*7|1|0.08|ENSG00000055163|chr5:157319855-157319856|-/GA|frameshift_variant;ENSG00000055163|ENST00000620254|CYFIP2;ENSG00000273749|ENST00000617928|CYFIP1;nc|ENSG00000055163|Q96F07|CYFIP2	54.722347961057174	0.257609425301511	5				NaN	NaN	0	NaN	6987	4000	10983
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	10990	31.796	NaN	1605.8	30	0	240.24	0.035	+			11786	FSNTTLMIS	9	57	515.2509006496439	1028.4872483660877	2	515.250732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_FSNTTLM(Oxidation (M))IS_	ENST00000470045.1_1_10:22605346-22607030:+|nuORF	52.936696900407355	0.27249468807391813	5				NaN	NaN	0	NaN	6988	4000	10983
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11002	31.822	NaN	1806.3	30	0	181.77	0.214	+			37173	SIYAEPVWQ	9	64	546.7712581454333	1091.5279633576665	2	546.771728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIYAEPVWQ_	KLHL32|p.Q274E|1|0.29|ENSG00000186231|chr6:97113975-97113975|C/G|missense_variant	37.15910966729921	0.4535818937225704	5				NaN	NaN	0	NaN	6997	4003	11001
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11003	31.825	NaN	1309	30	0	158.68	0.033				-1	 	0	48	430.7737698332787	859.5329867333575	2	430.7730407714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	6998	4003	11001
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11012	31.845	NaN	3599.8	30	0	334.41	0.214			+	13375	GLARTVNEL	9	57	486.7781910231378	971.5418291130757	2	486.77667236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GLARTVNEL_	REV__ENSG00000105143|ENST00000594383|SLC1A6;REV__nc|ENSG00000105143|P48664-2|SLC1A6;REV__SLC1A6|p.M377Hfs*66|1|0.13|ENSG00000105143|chr19:14956517-14956518|-/C|frameshift_variant	58.78195531508484	0.22376836668196862	5				NaN	NaN	0	NaN	7004	4006	11011
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11013	31.849	NaN	1609.8	30	0	411.9	0.035	+			46996	VKSLGLKKM	9	56	502.31955782628853	1002.6245627193771	2	502.3189392089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VKSLGLKKM_	tr|U7T1U5|U7T1U5_FUSNULargeribosomalsubunitproteinuL30OS=FusobacteriumnucleatumCTI-5OX=1316586GN=rpmDPE=3SV=1	32.81241826257853	0.4965981579233955	5				NaN	NaN	0	NaN	7005	4006	11011
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11021	31.867	NaN	4509.7	30	0	2743.8	0.214				-1	VVKLAAMLR	9	34	339.5482153340447	1015.6228166023341	3	339.5477294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_VVKLAAM(Oxidation (M))LR_	ENST00000544440.6_1_13:77625173-77629724:-|nuORF	20.94693142431847	0.6074874384046576	5				NaN	NaN	0	NaN	7010	4009	11020
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11022	31.871	NaN	1656.6	30	0	142.12	0.037	+			14068	GSISDKFFQK	10	67	578.8045534864831	1155.594554039766	2	578.8038940429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSISDKFFQK_	ENSG00000089472|ENST00000343002|HEPH;HEPH|p.R1086Qfs*4|1|0.29|ENSG00000089472|chrX:66266444-66266445|-/C|frameshift_variant;nc|ENSG00000089472|Q9BQS7-2|HEPH;nc|ENSG00000089472|Q9BQS7-3|HEPH;nc|ENSG00000089472|Q9BQS7-4|HEPH	80.45461616416974	0.1919067876629769	5				NaN	NaN	0	NaN	7011	4009	11020
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11032	31.893	NaN	4026.1	30	0	467.23	0.214	+			15687	GVMTVLIKR	9	62	508.818587310341	1015.622621687482	2	508.81805419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVMTVLIKR_	ENSG00000109971|ENST00000534624|HSPA8;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;HSPA8|p.K569Dfs*6|1|0.3|ENSG00000109971|chr11:123058302-123058303|TC/-|frameshift_variant;nc|ENSG00000109971|P11142-2|HSPA8	85.16082228582465	0.07850854922700509	5				NaN	NaN	0	NaN	7018	4012	11031
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11033	31.897	NaN	2004.5	30	0	407	0.106			+	37222	SKMDAIETAL	10	59	539.7771534692689	1077.5397540053377	2	539.7766723632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SKMDAIETAL_	REV__EEA1|p.I175M|1|0.49|ENSG00000102189|chr12:92852292-92852292|T/C|missense_variant	40.05817265558897	0.5486090488315611	5				NaN	NaN	0	NaN	7019	4012	11031
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11034	31.898	NaN	1497.5	30	0	147.05	0.106	+			35123	SAHAAIIAY	9	56	458.74748560662033	NaN	0	458.7478942871094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAHAAIIAY_	ENSG00000146955|ENST00000537763|RAB19;nc|ENSG00000146955|A4D1S5-2|RAB19	40.5726180659479	0.27166212580479165	5				NaN	NaN	0	NaN	7020	4012	11031
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11035	31.9	NaN	1785.4	30	0	279.98	0.106			+	34172	RTAVYETY	8	55	501.74884821392413	1001.4831434946483	2	501.7482604980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RTAVYETY_	REV__ENSG00000008086|ENST00000623535|CDKL5;REV__nc|ENSG00000008086|O76039-1|CDKL5	53.351449002276354	0.5676011784961348	5				NaN	NaN	0	NaN	7021	4012	11031
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11036	31.902	NaN	1036.6	30	0	174.53	0.031			+	30073	PQLLLLKLR	9	37	365.2525329589844	NaN	0	365.2525329589844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PQLLLLKLR_	REV__ENST00000555988.1_2_14:75356010-75360059:+|nuORF	8.693696342081763	0.40727630907727536	5				NaN	NaN	0	NaN	7022	4012	11031
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11049	31.929	NaN	5179.6	30	0	278.39	0.214			+	33366	RHQAVCKTN	9	67	557.2832707960814	1112.5519886589627	2	557.28173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_RHQAVC(Carbamidomethyl (C))KTN_	REV__DCAF8L2|p.V527Cfs*7|1|0.39|ENSG00000189186|chrX:27748474-27748474|G/-|frameshift_variant;REV__ENSG00000189186|ENST00000451261|DCAF8L2	71.87747018426188	0.13267044672804276	5				NaN	NaN	0	NaN	7032	4015	11048
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11050	31.933	NaN	1708.5	30	0	213.77	0.106	+			20293	KEPEINTTL	9	61	522.7831873990866	1043.5518218649731	2	522.7833862304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEPEINTTL_	ENSG00000165487|ENST00000382374|MICU2;ENST00000480341.5_1_13:22077016-22089705:-|nuORF	63.53385203322761	0.18415635464017938	5				NaN	NaN	0	NaN	7033	4015	11048
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11051	31.935	NaN	1933.1	30	0	163.46	0.106	+			50641	YEDATKITV	9	65	520.2698027131604	1038.5250524931207	2	520.2684326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YEDATKITV_	ENSG00000132383|ENST00000254719|RPA1	56.43379154798735	0.2433427591689151	5				NaN	NaN	0	NaN	7034	4015	11048
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11052	31.937	NaN	2177.1	30	0	193.12	0.106	+			10651	EYQIKTNQL	9	64	568.8008294690877	NaN	0	568.8004760742188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EYQIKTNQL_	ENSG00000148444|ENST00000376836|COMMD3;ENST00000463409.6_1_10:22605382-22615407:+|nuORF;ENST00000496071.5_1_10:22607528-22608924:+|nuORF;ENST00000602395.1_1_10:22607528-22615407:+|nuORF;ENST00000602574.5_1_10:22607528-22607842:+|nuORF	90.60085204095205	0.040385177724871185	5				NaN	NaN	0	NaN	7035	4015	11048
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11053	31.938	NaN	3501.9	30	0	267.41	0.106				-1	 	0	63	490.7843413845944	979.5541298359889	2	491.28485107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7036	4015	11048
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11054	31.94	NaN	2504.6	30	0	226.57	0.039	+			47306	VNRPRNIMVY	10	65	631.3442540064176	1260.673955079635	2	631.844970703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VNRPRNIMVY_	ENSG00000197601|ENST00000354817|FAR1	34.172542307311794	0.6007644933930345	5				NaN	NaN	0	NaN	7037	4015	11048
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11064	31.962	NaN	3787.1	30	0	543.04	0.214	+			26441	LTGPVMPVR	9	63	485.28241609699967	968.5502792607994	2	485.2809753417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LTGPVMPVR_	ENSG00000167526|ENST00000311528|RPL13;ENST00000399461.8_1_16:89627605-89629447:+|nuORF;ENST00000484610.5_1_16:89627907-89629447:+|nuORF;ENST00000570149.1_1_16:89628679-89629447:+|nuORF;nc|ENSG00000167526|P26373-2|RPL13	98.62937762414208	0.04060045538121712	5				NaN	NaN	0	NaN	7044	4018	11063
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11065	31.966	NaN	3965.7	30	0	725.5	0.106				-1	 	0	63	455.25635721617977	908.4981614991596	2	455.25531005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7045	4018	11063
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11066	31.968	NaN	2046	30	0	160.04	0.106			+	49121	VVLPRRTY	8	58	502.3060539029127	1002.5975548726254	2	502.3050537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVLPRRTY_	REV__ENSG00000155660|ENST00000652332|PDIA4	51.33545320467046	0.5859736979383976	5				NaN	NaN	0	NaN	7046	4018	11063
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11067	31.97	NaN	1350.3	30	0	155.3	0.106			+	-1	VQYMLNPNN	9	55	554.758544921875	NaN	0	554.758544921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_VQYM(Oxidation (M))LNPNN_	REV__DDX17|p.D582V|1|0.19|ENSG00000100201|chr22:38486380-38486380|T/A|missense_variant	38.80614096846853	0.28164298475537564	5				NaN	NaN	0	NaN	7047	4018	11063
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11068	31.971	NaN	1005.7	30	0	81.159	0.034			+	2102	ALGAIDLIAS	10	47	472.2760314941406	NaN	0	472.2760314941406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ALGAIDLIAS_	REV__ENSG00000048707|ENST00000620676|VPS13D;REV__nc|ENSG00000048707|Q5THJ4-2|VPS13D;REV__VPS13D|p.K3964Nfs*34|1|0.09|ENSG00000048707|chr1:12403831-12403831|A/-|frameshift_variant	51.33545320467046	0.297159550775418	5				NaN	NaN	0	NaN	7048	4018	11063
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11080	31.997	NaN	4726.2	30	0	677.87	0.214				-1	 	0	69	524.3144817880361	1046.6144106428721	2	524.3140869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7057	4021	11079
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11081	32	NaN	1547.6	30	0	357.88	0.106	+			31077	QFEYGAKVVYT	11	47	652.828868324313	1303.643183715426	2	652.826416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QFEYGAKVVYT_	CON__Q28085	22.579656572578934	0.7529490144093228	5				NaN	NaN	0	NaN	7058	4021	11079
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11082	32.002	NaN	1478.9	30	0	257.18	0.106			+	-1	RYSSMVRTF	9	58	581.7871405191437	1161.5597281050873	2	581.7861938476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_RYSSM(Oxidation (M))VRTF_	REV__ENSG00000174876|ENST00000330330|AMY1B;REV__ENSG00000187733|ENST00000622339|AMY1C;REV__ENSG00000237763|ENST00000370083|AMY1A;REV__ENSG00000240038|ENST00000684275|AMY2B;REV__ENSG00000243480|ENST00000414303|AMY2A;REV__nc|ENSG00000240038|P19961-2|AMY2B	24.519189625965996	0.574102787014149	5				NaN	NaN	0	NaN	7059	4021	11079
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11083	32.004	NaN	1958.3	30	0	156.08	0.106				-1	FAGPCKVI	8	48	446.24202962236274	890.4695063115255	2	446.24078369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_FAGPC(Carbamidomethyl (C))KVI_	ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC;PRKDC|p.D2437Wfs*3|1|0.11|ENSG00000253729|chr8:47840161-47840162|-/CA|frameshift_variant;PRKDC|p.E1557Sfs*16|1|0.16|ENSG00000253729|chr8:47886051-47886051|C/-|frameshift_variant;PRKDC|p.G1227Vfs*50|2|0.31|ENSG00000253729|chr8:47893306-47893306|C/-|frameshift_variant;PRKDC|p.K3681Nfs*6|1|0.32|ENSG00000253729|chr8:47785174-47785177|TTCT/-|frameshift_variant;PRKDC|p.M3670*|1|0.5|ENSG00000253729|chr8:47785212-47785212|T/-|frameshift_variant;PRKDC|p.M3846Cfs*12|1|0.13|ENSG00000253729|chr8:47779047-47779047|T/-|frameshift_variant;PRKDC|p.M4020Cfs*2|1|0.31|ENSG00000253729|chr8:47776968-47776968|T/-|frameshift_variant;PRKDC|p.N3605Kfs*3|1|0.22|ENSG00000253729|chr8:47788993-47788994|-/T|frameshift_variant;PRKDC|p.N4037Ifs*15|1|0.17|ENSG00000253729|chr8:47776916-47776916|T/-|frameshift_variant;PRKDC|p.R2704Gfs*13|2|0.34|ENSG00000253729|chr8:47834238-47834238|T/-|frameshift_variant;PRKDC|p.S3402Ifs*16|1|0.04|ENSG00000253729|chr8:47799302-47799303|-/AAACCGTGAGTTAGAGGAGGTAA|frameshift_variant;PRKDC|p.S4099Qfs*6|1|0.25|ENSG00000253729|chr8:47774265-47774265|A/-|frameshift_variant;PRKDC|p.T3268Pfs*7|1|0.5|ENSG00000253729|chr8:47803426-47803426|T/-|frameshift_variant;PRKDC|p.W3401Cfs*4|1|0.01|ENSG00000253729|chr8:47799304-47799305|-/AATGAATA|frameshift_variant	35.200714571348534	0.6875396545722289	5				NaN	NaN	0	NaN	7060	4021	11079
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11084	32.006	NaN	4065.8	30	0	728.09	0.106				-1	 	0	63	439.26180725657133	876.5090615799427	2	439.260009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7061	4021	11079
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11085	32.008	NaN	2268.3	30	0	804.53	0.037	+			8748	EEFQFIKKA	9	71	570.309109631986	1138.6036663307718	2	570.8089599609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EEFQFIKKA_	ENSG00000140259|ENST00000267812|MFAP1	41.42661286455405	0.403525789677298	5				NaN	NaN	0	NaN	7062	4021	11079
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11101	32.041	NaN	18878	30	0	12795	0.214	+			24558	LGLVYKVQQ	9	55	349.8785264147689	1046.6137498445066	3	349.8780517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LGLVYKVQQ_	ENSG00000128829|ENST00000263791|EIF2AK4;nc|ENSG00000128829|Q9P2K8-2|EIF2AK4	28.2542754592877	0.5391964248700117	5				NaN	NaN	0	NaN	7075	4024	11100
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11102	32.045	NaN	6722.8	30	0	2357.5	0.106			+	27504	MMPKLIAK	8	60	466.27737281177093	930.5401926903419	2	466.27642822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MMPKLIAK_	REV__CHD7|p.Q1179K|1|0.1|ENSG00000171316|chr8:60830334-60830334|C/A|missense_variant	53.351449002276354	0.5676011784961348	5				NaN	NaN	0	NaN	7076	4024	11100
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11103	32.047	NaN	1657.6	30	0	227.24	0.106	+			41495	SVPEAQSAL	9	44	451.2356329120546	900.4567128909092	2	451.23455810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVPEAQSAL_	ENSG00000086666|ENST00000261749|ZFAND6;ENST00000561017.1_1_15:80414070-80415156:+|nuORF;nc|ENSG00000086666|Q6FIF0-2|ZFAND6	60.11826168202944	0.21262886028301267	5				NaN	NaN	0	NaN	7077	4024	11100
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11104	32.048	NaN	1688.6	30	0	470.04	0.106			+	51415	YTSRKREVT	9	27	380.54216715158105	1138.6046720549432	3	380.54107666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YTSRKREVT_	REV__ENST00000482786.5_1_2:46815246-46815330:-|nuORF;REV__nc|ENSG00000151665|Q07326-2|PIGF	18.262085536374414	0.6112419832031293	5				NaN	NaN	0	NaN	7078	4024	11100
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11105	32.05	NaN	1406.3	30	0	292.58	0.106	+			49894	VYTSKSDVW	9	59	542.7699496323576	NaN	0	542.7696533203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VYTSKSDVW_	ENSG00000153208|ENST00000295408|MERTK;ENSG00000167601|ENST00000301178|AXL;nc|ENSG00000167601|P30530-2|AXL	34.172542307311794	0.30503706118289736	5				NaN	NaN	0	NaN	7079	4024	11100
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11106	32.052	NaN	1132.4	30	0	98.358	0.035			+	25681	LRGAQGHAHS	10	54	517.2662870040343	1032.5180210748686	2	517.2666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LRGAQGHAHS_	REV__ENST00000526028.1_1_11:125757866-125758112:+|nuORF	37.81151784470057	0.569310847604193	5				NaN	NaN	0	NaN	7080	4024	11100
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11107	32.053	NaN	1931.9	30	0	360.06	0.144				-1	 	0	40	336.534875618206	1006.5827974548181	3	336.5343322753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7081	4024	11100
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11120	32.082	NaN	2114.8	30	0	148.5	0.214				-1	 	0	62	520.2831167439912	1038.5516805547823	2	520.2820434570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7091	4027	11119
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11121	32.085	NaN	1444.8	30	0	254.83	0.106				-1	 	0	47	448.7462680165143	895.4779830998286	2	448.7451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7092	4027	11119
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11122	32.087	NaN	1446.9	30	0	264.29	0.106				-1	 	0	48	434.2513806753456	866.4882084174913	2	434.2500915527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7093	4027	11119
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11123	32.089	NaN	1637.2	30	0	188.71	0.106			+	-1	CTKWVTSVT	9	63	541.2707526741704	1080.5269524151406	2	541.2705688476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_C(Carbamidomethyl (C))TKWVTSVT_	REV__ENST00000371269.7_1_1:55315325-55315445:-|nuORF	39.252832667884924	0.4290233611298554	5				NaN	NaN	0	NaN	7094	4027	11119
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11124	32.091	NaN	2041.2	30	0	1220.9	0.106	+			23500	LAGLAVHQI	9	43	461.2805217561247	920.5464905790494	2	461.2792663574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LAGLAVHQI_	ENST00000425327.6_2_3:118619838-118620162:-|nuORF	25.450171626174864	0.5654022654467333	5				NaN	NaN	0	NaN	7095	4027	11119
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11125	32.093	NaN	2017.7	30	0	229.18	0.106			+	25243	LNHLGEFSH	9	60	527.2590017098722	1052.5034504865444	2	527.2581176757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LNHLGEFSH_	REV__ENSG00000133067|ENST00000367278|LGR6;REV__ENST00000308543.3_1_1:202245458-202272411:+|nuORF;REV__ENST00000506931.1_1_1:202245458-202249981:+|nuORF;REV__nc|ENSG00000133067|Q9HBX8-2|LGR6	56.72105179125745	0.24094814563026265	5				NaN	NaN	0	NaN	7096	4027	11119
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11126	32.094	NaN	1750.3	30	0	130.17	0.036			+	8497	EATAQVVQKQ	10	57	551.2989268503627	1100.5833007675253	2	551.2982788085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EATAQVVQKQ_	REV__ENSG00000137073|ENST00000379238|UBAP2;REV__ENST00000480885.5_1_9:33998751-34017161:-|nuORF;REV__UBAP2|p.K381Efs*18|1|0.03|ENSG00000137073|chr9:33948506-33948507|-/G|frameshift_variant;REV__UBAP2|p.L380Sfs*2|1|0.03|ENSG00000137073|chr9:33948507-33948508|-/TT|frameshift_variant	51.19269402634007	0.44601001148513897	5				NaN	NaN	0	NaN	7097	4027	11119
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11134	32.113	NaN	1328.8	30	0	150.75	0.214	+			29612	PGAAALCF	8	38	375.18530582531884	748.3560587174377	2	375.1845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PGAAALCF_	ENST00000573236.5_1_16:4390322-4393442:-|nuORF	16.704963439144045	0.7946246187734944	5				NaN	NaN	0	NaN	7102	4030	11133
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11135	32.116	NaN	1931.3	30	0	350.66	0.106	+			10313	ETREKELEQ	9	64	581.2907736916396	NaN	0	581.2901000976562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ETREKELEQ_	CNTLN|p.C821Lfs*2|1|0.17|ENSG00000044459|chr9:17394913-17394914|-/T|frameshift_variant;CNTLN|p.I1388Nfs*3|1|0.3|ENSG00000044459|chr9:17502587-17502588|-/A|frameshift_variant;CNTLN|p.K1130Rfs*14|1|0.25|ENSG00000044459|chr9:17462996-17462996|A/-|frameshift_variant;CNTLN|p.M1308*|1|0.36|ENSG00000044459|chr9:17484355-17484355|A/-|frameshift_variant;CNTLN|p.M1308Nfs*9|1|0.46|ENSG00000044459|chr9:17484354-17484355|-/A|frameshift_variant;CNTLN|p.T1324Dfs*27|1|0.14|ENSG00000044459|chr9:17484406-17484407|-/A|frameshift_variant;ENSG00000044459|ENST00000380647|CNTLN;nc|ENSG00000044459|Q9NXG0|CNTLN	32.81241826257853	0.3119040447479903	5				NaN	NaN	0	NaN	7103	4030	11133
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11136	32.118	NaN	1952.3	30	0	143.18	0.106			+	19838	KEEEETRFV	9	69	583.7894565018967	1165.5643600705932	2	583.787841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEEEETRFV_	REV__ENSG00000118939|ENST00000377595|UCHL3;REV__ENST00000563635.5_1_13:76123956-76287321:+|nuORF	38.753607047826485	0.4348790777924195	5				NaN	NaN	0	NaN	7104	4030	11133
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11137	32.12	NaN	1931.6	30	0	314.76	0.106				-1	RNTGKGGCR	9	54	503.2549983960156	1004.4954438588312	2	503.2530212402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_RNTGKGGC(Carbamidomethyl (C))R_	ENST00000367591.4_1_6:143772127-143780324:+|nuORF	29.170058357718403	0.5306379469863586	5				NaN	NaN	0	NaN	7105	4030	11133
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11138	32.122	NaN	2100.2	30	0	316.22	0.106			+	28047	NAALLPEEAP	10	52	512.7669010530755	NaN	0	512.7669067382812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NAALLPEEAP_	REV__nc|ENSG00000157168|Q02297-9|NRG1	29.14955571784316	0.4044631218331212	5				NaN	NaN	0	NaN	7106	4030	11133
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11139	32.124	NaN	1346.3	30	0	111.16	0.106	+			10594	EYKNTNEMF	9	59	588.2567415395063	1174.4989301458124	2	588.2548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EYKNTNEMF_	ENSG00000065243|ENST00000370521|PKN2;nc|ENSG00000065243|Q16513-2|PKN2;nc|ENSG00000065243|Q16513-3|PKN2;nc|ENSG00000065243|Q16513-4|PKN2;nc|ENSG00000065243|Q16513-5|PKN2	98.62937762414208	0.04060045538121712	5				NaN	NaN	0	NaN	7107	4030	11133
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11140	32.126	NaN	1688.5	30	0	140.44	0.034	+			17295	IADPFLVAI	9	59	479.7827469541832	957.5509409751664	2	479.7812805175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IADPFLVAI_	ABCA3|p.G1334Afs*12|1|0.4|ENSG00000167972|chr16:2283220-2283220|C/-|frameshift_variant;ABCA3|p.S746Pfs*15|1|0.32|ENSG00000167972|chr16:2297357-2297357|C/-|frameshift_variant;ENSG00000167972|ENST00000301732|ABCA3;ENST00000563623.5_1_16:2339371-2378589:-|nuORF	57.81127852772723	0.2318599694398087	5				NaN	NaN	0	NaN	7108	4030	11133
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11150	32.147	NaN	4522.7	30	0	949.33	0.214			+	30367	PVHLQELDDT	10	57	389.52805218242014	NaN	0	389.5279846191406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PVHLQELDDT_	REV__ENST00000478809.2_1_10:108360440-108378027:-|nuORF	37.50817390946774	0.3770175549877019	5				NaN	NaN	0	NaN	7115	4033	11149
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11151	32.151	NaN	2159.4	30	0	271.7	0.106			+	-1	KEMVQLAR	8	58	495.7732472642109	989.5319415952218	2	495.7720031738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_KEM(Oxidation (M))VQLAR_	REV__ENSG00000113048|ENST00000261413|MRPS27;REV__ENST00000515226.5_1_5:71516738-71522904:-|nuORF;REV__nc|ENSG00000113048|Q92552-2|MRPS27	51.33545320467046	0.5859736979383976	5				NaN	NaN	0	NaN	7116	4033	11149
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11152	32.153	NaN	879.86	30	0	133.84	0.03	+			45842	VALAAGAA	8	37	322.19329833984375	NaN	0	322.19329833984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VALAAGAA_	ENST00000529738.1_1_11:67046963-67053650:+|nuORF	16.704963439144045	1.7418937515398478	5				NaN	NaN	0	NaN	7117	4033	11149
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11160	32.173	NaN	3507.3	30	0	194.06	0.214			+	46016	VAVLRMCR	8	59	502.77516782422066	NaN	0	502.7737121582031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_VAVLRMC(Carbamidomethyl (C))R_	REV__ENST00000554879.5_1_14:71374480-71476401:+|nuORF;REV__nc|ENSG00000100731|Q96RV3-2|PCNX1	55.50420428727701	1.7418937515398478	5				NaN	NaN	0	NaN	7122	4036	11159
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11161	32.176	NaN	2247.6	30	0	171.96	0.106			+	46051	VCFPKRAFR	9	65	562.3134578075213	1122.6123626818426	2	562.3123168945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VCFPKRAFR_	REV__ENSG00000117013|ENST00000347132|KCNQ4;REV__ENSG00000185760|ENST00000370398|KCNQ5;REV__KCNQ4|p.R166H|1|0.33|ENSG00000117013|chr1:40818255-40818255|G/A|missense_variant;REV__KCNQ5|p.T221Nfs*4|1|0.25|ENSG00000185760|chr6:73077361-73077362|-/A|frameshift_variant;REV__nc|ENSG00000117013|P56696-2|KCNQ4;REV__nc|ENSG00000185760|Q9NR82-2|KCNQ5;REV__nc|ENSG00000185760|Q9NR82-3|KCNQ5;REV__nc|ENSG00000185760|Q9NR82-4|KCNQ5;REV__nc|ENSG00000185760|Q9NR82-5|KCNQ5;REV__nc|ENSG00000185760|Q9NR82-6|KCNQ5;REV__nc|ENSG00000185760|Q9NR82-7|KCNQ5	25.450171626174864	0.5654022654467333	5				NaN	NaN	0	NaN	7123	4036	11159
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11162	32.178	NaN	1864.8	30	0	226.69	0.036				-1	KLCHPAGDLS	10	62	549.2747190846593	NaN	0	549.27392578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_KLC(Carbamidomethyl (C))HPAGDLS_	ENST00000287878.8_2_7:151573972-151574197:-|nuORF	42.396135135203025	0.3536752194735987	5				NaN	NaN	0	NaN	7124	4036	11159
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11178	32.211	NaN	5536.9	30	0	1523.1	0.214	+			50890	YFSLIPKT	8	60	484.7755219303438	967.5364909274876	2	484.77435302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YFSLIPKT_	ENSG00000116031|ENST00000410009|CD207	53.351449002276354	0.5676011784961348	5				NaN	NaN	0	NaN	7137	4039	11177
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11179	32.215	NaN	1284.7	30	0	542.04	0.106				-1	 	0	34	343.1981510246525	342.1908745580525	1	343.1976623535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7138	4039	11177
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11180	32.217	NaN	3378.3	30	0	574.48	0.035	+			18645	ISTQIRESP	9	66	515.7809272839869	1029.5473016347737	2	515.7808227539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ISTQIRESP_	ENSG00000168754|ENST00000490605|FAM178B;ENST00000494172.1_1_2:97543530-97560824:-|nuORF;nc|ENSG00000168754|Q8IXR5-2|FAM178B;nc|ENSG00000168754|Q8IXR5-4|FAM178B	58.22992032128504	0.22837015374068087	5				NaN	NaN	0	NaN	7139	4039	11177
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11193	32.244	NaN	8472.9	30	0	2670.8	0.214	+			14192	GSSAINILK	9	50	451.7705269205809	901.5265009079618	2	451.76861572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSSAINILK_	ENSG00000167522|ENST00000301030|ANKRD11;ENST00000330736.9_1_16:89334888-89371640:-|nuORF	67.49366992349736	0.1516260258713357	5				NaN	NaN	0	NaN	7149	4042	11192
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11194	32.248	NaN	2131.9	30	0	254.84	0.106	+			20350	KESAEFQTQL	10	66	590.7972666648228	1179.5799803964455	2	590.7958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KESAEFQTQL_	ENSG00000047410|ENST00000367478|TPR;TPR|p.E1141Dfs*29|1|0.08|ENSG00000047410|chr1:186344085-186344086|-/CAGGTAAA|frameshift_variant;TPR|p.P2083Qfs*3|1|0.31|ENSG00000047410|chr1:186323735-186323735|G/-|frameshift_variant;TPR|p.T2133Lfs*63|1|0.03|ENSG00000047410|chr1:186322382-186322383|-/GTACTAATAAG|frameshift_variant;TPR|p.V1142Efs*26|1|0.08|ENSG00000047410|chr1:186344083-186344084|-/TT|frameshift_variant	54.343338949951054	0.4172868656359992	5				NaN	NaN	0	NaN	7150	4042	11192
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11195	32.25	NaN	2708.7	30	0	518.02	0.106	+			15007	GTNALLVVK	9	60	457.7880050141473	913.5614570950946	2	457.78692626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTNALLVVK_	ENSG00000006712|ENST00000221265|PAF1;nc|ENSG00000006712|Q8N7H5-2|PAF1;nc|ENSG00000006712|Q8N7H5-3|PAF1	56.43379154798735	0.2433427591689151	5				NaN	NaN	0	NaN	7151	4042	11192
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11196	32.252	NaN	1332.9	30	0	145.16	0.106			+	30094	PRALTSGTHPG	11	54	547.2896728515625	NaN	0	547.2896728515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PRALTSGTHPG_	REV__ENST00000322313.8_1_2:128459548-128459872:-|nuORF	34.172542307311794	0.4131234684587831	5				NaN	NaN	0	NaN	7152	4042	11192
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11197	32.253	NaN	1620.9	30	0	257.59	0.106				-1	 	0	55	481.7699460389109	961.5253391446219	2	481.7686767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7153	4042	11192
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11198	32.255	NaN	2276.4	30	0	491.55	0.035			+	49424	VVVDDGANTL	10	65	501.75850733492297	NaN	0	501.75738525390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VVVDDGANTL_	REV__ENSG00000096433|ENST00000605930|ITPR3;REV__ITPR3|p.N1746Tfs*30|1|0.2|ENSG00000096433|chr6:33684872-33684872|A/-|frameshift_variant;REV__ITPR3|p.R2604Gfs*30|1|0.27|ENSG00000096433|chr6:33694944-33694944|C/-|frameshift_variant	52.936696900407355	0.28703625529470256	5				NaN	NaN	0	NaN	7154	4042	11192
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11211	32.282	NaN	3375.4	30	0	240.6	0.214	+			49679	VYKCLSENI	9	74	563.2851776603385	1124.555802387477	2	563.28466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_VYKC(Carbamidomethyl (C))LSENI_	ENSG00000082898|ENST00000401558|XPO1;ENST00000428210.5_1_2:61705957-61719950:-|nuORF;ENST00000461407.5_1_2:61712881-61715780:-|nuORF	65.46538089061403	0.16805504838372562	5				NaN	NaN	0	NaN	7164	4045	11210
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11212	32.286	NaN	3753.9	30	0	491.36	0.106	+			24179	LEPLGVLFPS	10	63	536.3071496693266	1070.599746405453	2	536.3068237304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LEPLGVLFPS_	ENSG00000117877|ENST00000309424|POLR1G;nc|ENSG00000117877|O15446-2|POLR1G	74.25504064058377	0.24255678544297835	5				NaN	NaN	0	NaN	7165	4045	11210
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11213	32.288	NaN	2651.1	30	0	645.93	0.106	+			30453	PYTKVEESF	9	68	550.2705559022094	1098.5265588712186	2	550.2705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PYTKVEESF_	ENSG00000182858|ENST00000330817|ALG12	67.49366992349736	0.1516260258713357	5				NaN	NaN	0	NaN	7166	4045	11210
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11214	32.29	NaN	4036	30	0	651.36	0.106			+	26806	LVSLTKQRH	9	65	541.3269789526747	1080.6394049721494	2	541.3263549804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LVSLTKQRH_	REV__ENSG00000149577|ENST00000324225|SIDT2;REV__nc|ENSG00000149577|Q8NBJ9-2|SIDT2	42.86426827375447	0.38666266728046506	5				NaN	NaN	0	NaN	7167	4045	11210
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11215	32.292	NaN	3374.8	30	0	627.35	0.106				-1	 	0	64	470.7957825720204	939.5770122108408	2	470.7948303222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7168	4045	11210
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11216	32.293	NaN	2523.4	30	0	571.91	0.106	+			27513	MNLKKEATL	9	62	524.2962356413776	1046.5779183495551	2	524.2962036132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MNLKKEATL_	ENSG00000154655|ENST00000317931|L3MBTL4;L3MBTL4|p.R516Gfs*63|1|0.34|ENSG00000154655|chr18:5969489-5969489|A/-|frameshift_variant;nc|ENSG00000154655|Q8NA19-2|L3MBTL4;nc|ENSG00000154655|Q8NA19|L3MBTL4	24.20275056022122	0.577060078256802	5				NaN	NaN	0	NaN	7169	4045	11210
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11217	32.295	NaN	2860.5	30	0	481.94	0.035	+			42038	SWGTLAVLAL	10	69	515.799644004809	1029.584735076418	2	515.7994384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SWGTLAVLAL_	ENSG00000081791|ENST00000432126|DELE1	51.33545320467046	0.4446945571623749	5				NaN	NaN	0	NaN	7170	4045	11210
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11229	32.321	NaN	2246.7	30	0	520.26	0.214	+			18057	IIVGNPKAL	9	54	462.7983998202961	923.5822467073922	2	462.7969970703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IIVGNPKAL_	ENSG00000005007|ENST00000262803|UPF1;ENST00000600689.1_1_19:18974163-18976510:+|nuORF;nc|ENSG00000005007|Q92900|UPF1	73.97473282117947	0.12360187025703594	5				NaN	NaN	0	NaN	7179	4048	11228
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11230	32.324	NaN	1795	30	0	126.14	0.106			+	-1	YLGWLAAML	9	58	527.2736944935529	NaN	0	527.2739868164062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_YLGWLAAM(Oxidation (M))L_	REV__ENSG00000103227|ENST00000262301|LMF1;REV__ENST00000566609.1_1_16:1002623-1020980:-|nuORF;REV__ENST00000568897.5_1_16:1004355-1020830:-|nuORF;REV__LMF1|p.G181Pfs*61|1|0.08|ENSG00000103227|chr16:911050-911054|ACCCC/-|frameshift_variant	29.841539824830324	0.32690339240668626	5				NaN	NaN	0	NaN	7180	4048	11228
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11231	32.326	NaN	2970.9	30	0	1274.6	0.106	+			26717	LVKPNRNLQ	9	46	361.21938067496114	NaN	0	361.2193298339844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LVKPNRNLQ_	ENST00000423620.6_1_8:95718261-95718693:+|nuORF	34.172542307311794	0.30503706118289736	5				NaN	NaN	0	NaN	7181	4048	11228
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11232	32.328	NaN	2439.2	30	0	205.84	0.106	+			11243	FIKTFVKGF	9	70	543.8203191334972	1085.6260853337942	2	543.8184814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FIKTFVKGF_	tr|U7T3C0|U7T3C0_FUSNUSodium/glutamatesymporterOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00346PE=4SV=1	44.116797842482775	0.37197099687881774	5				NaN	NaN	0	NaN	7182	4048	11228
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11233	32.33	NaN	1546.8	30	0	275.1	0.106	+			26906	LYAFNVTVV	9	49	513.2861412934179	1024.5577296536358	2	513.2858276367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LYAFNVTVV_	ENSG00000183960|ENST00000328405|KCNH8;ENST00000452398.5_1_3:19388190-19491848:+|nuORF;KCNH8|p.G414Afs*16|1|0.44|ENSG00000183960|chr3:19438222-19438222|G/-|frameshift_variant;KCNH8|p.M380Wfs*9|1|0.44|ENSG00000183960|chr3:19395268-19395268|A/-|frameshift_variant	44.116797842482775	0.37197099687881774	5				NaN	NaN	0	NaN	7183	4048	11228
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11234	32.332	NaN	2234.8	30	0	254.71	0.035	+			49380	VVSVILEQK	9	59	507.8141063562306	1013.6136597792612	2	507.8128967285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VVSVILEQK_	ANKFY1|p.P691Rfs*61|1|0.4|ENSG00000185722|chr17:4182230-4182230|G/-|frameshift_variant;ENSG00000185722|ENST00000341657|ANKFY1;nc|ENSG00000185722|Q9P2R3-2|ANKFY1;nc|ENSG00000185722|Q9P2R3-4|ANKFY1	72.87924865735499	0.12833875048249987	5				NaN	NaN	0	NaN	7184	4048	11228
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11235	32.332	NaN	1217.1	30	0	139.23	0.14	+			48463	VTLNTSQYL	9	61	519.77685546875	NaN	0	519.77685546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VTLNTSQYL_	ENSG00000198265|ENST00000358691|HELZ;HELZ|p.L1089Ffs*20|1|0.05|ENSG00000198265|chr17:67128771-67128772|-/GTTAATG|frameshift_variant;nc|ENSG00000198265|P42694-2|HELZ	33.921630207806714	0.3063038642147651	5				NaN	NaN	0	NaN	7185	4048	11228
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11247	32.359	NaN	2757.5	30	0	390.79	0.214	+			26627	LVAIPYLY	8	63	476.2802470746008	950.5459412160017	2	476.2786865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LVAIPYLY_	ENSG00000280314|ENST00000641662|OR8K3	33.49298260027079	0.7007254697536482	5				NaN	NaN	0	NaN	7194	4051	11246
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11248	32.363	NaN	2556.1	30	0	403.95	0.106			+	18547	ISMPDLAPLS	10	69	522.2763882574295	1042.538223581659	2	522.7767333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ISMPDLAPLS_	REV__TSHZ3|p.M749I|1|0.3|ENSG00000121297|chr19:31277546-31277546|C/T|missense_variant	54.776311868738084	0.41334902933431344	5				NaN	NaN	0	NaN	7195	4051	11246
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11249	32.365	NaN	5796.8	30	0	1433.9	0.106				-1	 	0	35	331.8667711690463	992.5784841073389	3	331.86614990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7196	4051	11246
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11250	32.367	NaN	1694.1	30	0	253.31	0.106	+			45227	TVPLEVFEY	9	62	548.7807881601215	NaN	0	548.78173828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TVPLEVFEY_	ENSG00000133398|ENST00000255764|MED10;MED10|p.N92Mfs*11|1|0.23|ENSG00000133398|chr5:6374358-6374358|T/-|frameshift_variant	37.15910966729921	0.2899585034171616	5				NaN	NaN	0	NaN	7197	4051	11246
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11251	32.369	NaN	1352.6	30	0	182.67	0.106			+	37848	SNLLLKTYP	9	40	350.20680007450665	NaN	0	350.2074279785156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SNLLLKTYP_	REV__tr|U7SSL7|U7SSL7_FUSNUPeptide/nickeltransportsystemATP-bindingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01495PE=3SV=1	24.20275056022122	0.35506675290109213	5				NaN	NaN	0	NaN	7198	4051	11246
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11252	32.37	NaN	1203.8	30	0	155.11	0.106	+			12806	GEMKGAIGL	9	48	438.2360888349883	NaN	0	438.235595703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GEMKGAIGL_	ENSG00000005020|ENST00000345317|SKAP2	39.252832667884924	0.27938773122138094	5				NaN	NaN	0	NaN	7199	4051	11246
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11253	32.372	NaN	1570	30	0	244.41	0.035				-1	GMMALLLAGL	10	54	503.27728271484375	NaN	0	503.27728271484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_GM(Oxidation (M))MALLLAGL_	ENSG00000204539|ENST00000376288|CDSN	54.76467175910256	0.2754795324328683	5				NaN	NaN	0	NaN	7200	4051	11246
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11261	32.39	NaN	7263.7	30	0	1212.2	0.214			+	44209	TRHSFAGAAL	10	62	515.7754495604157	1029.5363461876314	2	515.7747192382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TRHSFAGAAL_	REV__ENST00000496978.5_1_4:154143465-154143747:+|nuORF	56.43379154798735	0.3982744522255666	5				NaN	NaN	0	NaN	7205	4054	11260
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11262	32.394	NaN	6204.8	30	0	671.8	0.106			+	49389	VVTEAIGQVT	10	65	508.7862073120678	1015.5578616909356	2	508.78509521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVTEAIGQVT_	REV__tr|U7STZ3|U7STZ3_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01040PE=4SV=1	51.52775601994872	0.4429225830406686	5				NaN	NaN	0	NaN	7206	4054	11260
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11263	32.396	NaN	4909.2	30	0	810.67	0.106	+			12512	GEERATAISL	10	73	523.778537657824	1045.542522382448	2	523.77783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEERATAISL_	ENSG00000196235|ENST00000432763|SUPT5H;ENST00000598459.5_1_19:39949480-39950711:+|nuORF;nc|ENSG00000196235|O00267-2|SUPT5H;SUPT5H|p.P800Hfs*154|1|0.21|ENSG00000196235|chr19:39473425-39473425|C/-|frameshift_variant	67.49366992349736	0.29779660154124327	5				NaN	NaN	0	NaN	7207	4054	11260
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11264	32.398	NaN	2699.7	30	0	805.66	0.106	+			8136	EAAAGRLLL	9	57	457.2765727349658	NaN	0	457.2767639160156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EAAAGRLLL_	ENSG00000152270|ENST00000282096|PDE3B;ENST00000534317.1_1_11:14665864-14793584:+|nuORF;nc|ENSG00000152270|Q13370-2|PDE3B	51.33545320467046	0.19748963086191895	5				NaN	NaN	0	NaN	7208	4054	11260
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11265	32.4	NaN	8059.8	30	0	2507.4	0.106				-1	LVLVCTMALC	10	48	361.18698653325566	NaN	0	361.1869201660156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_LVLVCTM(Oxidation (M))ALC_	ENSG00000275385|ENST00000616054|CCL18	39.252832667884924	0.37128895876774715	5				NaN	NaN	0	NaN	7209	4054	11260
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11266	32.401	NaN	2219.4	30	0	302.1	0.106			+	10307	ETQPKSLIS	9	57	501.7780642452986	1001.5415755573972	2	501.77679443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ETQPKSLIS_	REV__ENSG00000109944|ENST00000227349|JHY	35.15202426646627	0.4747332964206883	5				NaN	NaN	0	NaN	7210	4054	11260
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11267	32.403	NaN	1836.9	30	0	316.24	0.035				-1	ASMKKVKSL	9	34	336.5342764526086	NaN	0	336.533935546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_ASM(Oxidation (M))KKVKSL_	ENST00000369426.9_1_1:119575536-119588262:-|nuORF	14.864876125193954	0.3866709117995958	5				NaN	NaN	0	NaN	7211	4054	11260
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11274	32.421	NaN	3869.4	30	0	431.95	0.214			+	-1	PDANQLLHM	9	63	527.7522009883985	1053.489849043597	2	527.75146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_PDANQLLHM(Oxidation (M))_	REV__ENSG00000019582|ENST00000009530|CD74;REV__nc|ENSG00000019582|P04233-2|CD74;REV__nc|ENSG00000019582|P04233-4|CD74;REV__nc|ENSG00000019582|P04233-5|CD74	45.9519527083369	0.35044536499095585	5				NaN	NaN	0	NaN	7215	4057	11273
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11275	32.425	NaN	3471.5	30	0	365.65	0.106	+			27817	MSMKMGWK	8	65	507.7326280695208	1013.4507032058416	2	507.7315368652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_MSMKM(Oxidation (M))GWK_	ENST00000476805.2_1_2:64863869-64977517:-|nuORF	45.9519527083369	0.6193794311207887	5				NaN	NaN	0	NaN	7216	4057	11273
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11276	32.427	NaN	3292.8	30	0	293.26	0.106				-1	EVKKGMEI	8	59	475.25540316960587	948.4962534060118	2	475.2544250488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_EVKKGM(Oxidation (M))EI_	tr|U7SV19|U7SV19_FUSNU4-methyl-5(B-hydroxyethyl)-thiazolemonophosphatebiosynthesisproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01481PE=4SV=1	54.776311868738084	0.5534952410049249	5				NaN	NaN	0	NaN	7217	4057	11273
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11277	32.429	NaN	6564.4	30	0	1198.9	0.106	+			34860	RYSSMAASF	9	66	510.23524539936875	1018.4559378655375	2	510.234619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RYSSMAASF_	ENSG00000162366|ENST00000294338|PDZK1IP1	79.71258880314673	0.09879134589249085	5				NaN	NaN	0	NaN	7218	4057	11273
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11278	32.43	NaN	2001.9	30	0	391.6	0.106				-1	NTTGTLWTM	9	58	520.7381986398882	NaN	0	520.7382202148438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_NTTGTLWTM(Oxidation (M))_	ENST00000361005.9_1_9:33797876-33797957:+|nuORF	49.44154591367651	0.21054156626303966	5				NaN	NaN	0	NaN	7219	4057	11273
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11279	32.432	NaN	2533.3	30	0	333.11	0.106				-1	 	0	55	451.27219980866397	450.264923342064	1	451.271240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7220	4057	11273
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11280	32.434	NaN	3200.3	30	0	682.5	0.033				-1	 	0	55	437.27493636876954	872.5353198043391	2	437.2736511230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7221	4057	11273
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11287	32.452	NaN	6255.5	30	0	3505.9	0.215			+	41165	SVKMKGKLLIS	11	52	401.92099957022134	1202.741169310864	3	401.91998291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVKMKGKLLIS_	REV__ENSG00000112276|ENST00000314641|BVES	17.16674453292914	0.7901079503840427	5				NaN	NaN	0	NaN	7225	4060	11286
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11288	32.455	NaN	2616.3	30	0	1017.2	0.106	+			17884	IGAWRNRL	8	57	493.2886129393241	984.5626729454482	2	493.287353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IGAWRNRL_	ENSG00000110422|ENST00000303296|HIPK3;HIPK3|p.C434Afs*13|1|0.33|ENSG00000110422|chr11:33337147-33337147|T/-|frameshift_variant;nc|ENSG00000110422|Q9H422-2|HIPK3	54.76467175910256	0.5536104764165384	5				NaN	NaN	0	NaN	7226	4060	11286
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11289	32.457	NaN	3596	30	0	491.48	0.106			+	50187	WLLTLIIGKF	10	78	602.3778609243619	1202.7411689155238	2	602.3766479492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_WLLTLIIGKF_	REV__CCDC180|p.K1583Nfs*17|3|0.32|ENSG00000197816|chr9:97374551-97374551|C/-|frameshift_variant;REV__ENSG00000197816|ENST00000529487|CCDC180;REV__ENST00000375206.6_1_9:100053158-100139173:+|nuORF;REV__nc|ENSG00000197816|Q9P1Z9|CCDC180	68.84614121027924	0.2867470276772903	5				NaN	NaN	0	NaN	7227	4060	11286
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11290	32.459	NaN	2456.8	30	0	180.61	0.106			+	24907	LKNNIFSS	8	59	461.754120706471	921.493688479742	2	461.75274658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LKNNIFSS_	REV__ENST00000347869.7_1_3:50144979-50147044:+|nuORF	60.97194046774394	0.49215940876911696	5				NaN	NaN	0	NaN	7228	4060	11286
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11291	32.461	NaN	1497.5	30	0	599.44	0.106				-1	KTSVLSMK	8	49	455.2567347657854	908.4989165983708	2	455.2556457519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_KTSVLSM(Oxidation (M))K_	ENSG00000163075|ENST00000413369|CFAP221;ENST00000413057.6_1_2:120317267-120388537:+|nuORF;nc|ENSG00000163075|Q4G0U5-2|CFAP221;nc|ENSG00000163075|Q4G0U5-3|CFAP221	32.81241826257853	0.7059802730411993	5				NaN	NaN	0	NaN	7229	4060	11286
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11292	32.463	NaN	891.73	30	0	48.792	0.106			+	46959	VKGNVQVAI	9	53	464.28551497035915	926.5564770075183	2	464.2841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VKGNVQVAI_	REV__tr|U7T2B4|U7T2B4_FUSNULeucine--tRNAligaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=leuSPE=3SV=1	40.5726180659479	0.4135428067754104	5				NaN	NaN	0	NaN	7230	4060	11286
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11293	32.465	NaN	1754.4	30	0	162.4	0.036			+	6627	AYSLEIETR	9	66	541.2784840440669	1080.5424151549337	2	541.27685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AYSLEIETR_	REV__ENSG00000187239|ENST00000446176|FNBP1;REV__FNBP1|p.N328Kfs*2|1|0.11|ENSG00000187239|chr9:129924963-129924964|-/T|frameshift_variant;REV__nc|ENSG00000187239|Q96RU3-2|FNBP1;REV__nc|ENSG00000187239|Q96RU3-3|FNBP1;REV__nc|ENSG00000187239|Q96RU3-4|FNBP1;REV__nc|ENSG00000187239|Q96RU3-5|FNBP1	51.19269402634007	0.2889735674168909	5				NaN	NaN	0	NaN	7231	4060	11286
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11300	32.481	NaN	1473.1	30	0	166.32	0.214	+			40875	SVFGTMPLK	9	53	498.2659668407837	994.5173807483674	2	498.2646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_SVFGTM(Oxidation (M))PLK_	ENSG00000151348|ENST00000533608|EXT2;nc|ENSG00000151348|Q93063-2|EXT2;nc|ENSG00000151348|Q93063-3|EXT2	52.936696900407355	0.27249468807391813	5				NaN	NaN	0	NaN	7235	4063	11299
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11301	32.485	NaN	2384.6	30	0	311.52	0.106	+			36535	SFHEGTDVI	9	53	502.73844569629233	1003.4623384593847	2	502.7375183105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SFHEGTDVI_	ENSG00000065000|ENST00000643116|AP3D1;ENST00000591284.2_1_19:2133456-2164390:-|nuORF;nc|ENSG00000065000|O14617-2|AP3D1;nc|ENSG00000065000|O14617-3|AP3D1;nc|ENSG00000065000|O14617-4|AP3D1;nc|ENSG00000065000|O14617|AP3D1	37.15910966729921	0.4535818937225704	5				NaN	NaN	0	NaN	7236	4063	11299
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11302	32.487	NaN	1142.5	30	0	132.54	0.032	+			20940	KKAVPSAS	8	38	394.2377295013533	786.4609060695066	2	394.2370300292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KKAVPSAS_	CCDC180|p.K1351Sfs*28|1|0.14|ENSG00000197816|chr9:97364063-97364063|C/-|frameshift_variant;CCDC180|p.K1583Nfs*17|3|0.32|ENSG00000197816|chr9:97374551-97374551|C/-|frameshift_variant;ENSG00000197816|ENST00000529487|CCDC180;ENST00000375206.6_1_9:100053158-100139173:+|nuORF;nc|ENSG00000197816|Q9P1Z9|CCDC180	37.15910966729921	0.6739408393984688	5				NaN	NaN	0	NaN	7237	4063	11299
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11313	32.51	NaN	5260.4	30	0	1164.2	0.214	+			28175	NAPLVHATL	9	59	468.26990240970406	934.5252518862081	2	468.2690734863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAPLVHATL_	ENSG00000082898|ENST00000401558|XPO1;ENST00000428210.5_1_2:61720980-61752425:-|nuORF	40.77816245573522	0.41113185337114944	5				NaN	NaN	0	NaN	7245	4066	11312
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11314	32.514	NaN	2572.1	30	0	694.86	0.106	+			19188	IYTNLNQKI	9	48	553.8152605239933	1105.6159681147865	2	553.8148193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IYTNLNQKI_	ENSG00000144036|ENST00000272427|EXOC6B;nc|ENSG00000144036|Q9Y2D4-2|EXOC6B	82.7504851949679	0.08565546331141553	5				NaN	NaN	0	NaN	7246	4066	11312
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11315	32.516	NaN	2147.8	30	0	290.9	0.106			+	31522	QLHRLREQL	9	74	596.8482021125702	1191.6818512919403	2	596.8473510742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QLHRLREQL_	REV__ENSG00000015520|ENST00000381160|NPC1L1;REV__nc|ENSG00000015520|Q9UHC9-2|NPC1L1;REV__nc|ENSG00000015520|Q9UHC9-3|NPC1L1;REV__nc|ENSG00000015520|Q9UHC9-4|NPC1L1;REV__nc|ENSG00000015520|Q9UHC9|NPC1L1;REV__NPC1L1|p.L475Sfs*35|2|0.12|ENSG00000015520|chr7:44538974-44538974|G/-|frameshift_variant	41.42661286455405	0.403525789677298	5				NaN	NaN	0	NaN	7247	4066	11312
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11316	32.518	NaN	1515.2	30	0	115.72	0.106	+			37079	SISELKHALSG	11	64	571.3158951045708	1140.6172372759415	2	571.3154907226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SISELKHALSG_	ENSG00000129167|ENST00000682019|TPH1;nc|ENSG00000129167|P17752-2|TPH1	58.22992032128504	0.3392555181951113	5				NaN	NaN	0	NaN	7248	4066	11312
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11317	32.519	NaN	1133	30	0	103.57	0.106	+			22420	KTKNADVL	8	43	444.76200735205987	887.5094617709198	2	444.76080322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KTKNADVL_	tr|U7T3B7|U7T3B7_FUSNUBifunctionalproteinFolDOS=FusobacteriumnucleatumCTI-5OX=1316586GN=folDPE=3SV=1	51.33545320467046	0.5859736979383976	5				NaN	NaN	0	NaN	7249	4066	11312
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11318	32.521	NaN	1944.4	30	0	318.13	0.036	+			21152	KKTPWGKRG	9	66	529.317626953125	NaN	0	529.317626953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KKTPWGKRG_	ENSG00000125637|ENST00000245796|PSD4;ENST00000409656.5_1_2:113943320-113958989:+|nuORF;ENST00000418251.6_1_2:113943320-113958989:+|nuORF;ENST00000487574.1_1_2:113953766-113955491:+|nuORF;nc|ENSG00000125637|Q8NDX1-2|PSD4	32.81241826257853	0.3119040447479903	5				NaN	NaN	0	NaN	7250	4066	11312
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11319	32.522	NaN	2453.5	30	0	291.61	0.143	+			504	ACFEPANQMVK	11	66	619.2900624712973	1236.5655720093946	2	619.7897338867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ACFEPANQMVK_	ENSG00000075886|ENST00000321253|TUBA3D;ENSG00000123416|ENST00000336023|TUBA1B;ENSG00000127824|ENST00000248437|TUBA4A;ENSG00000152086|ENST00000312988|TUBA3E;ENSG00000167552|ENST00000301071|TUBA1A;ENSG00000167553|ENST00000301072|TUBA1C;ENSG00000198033|ENST00000400113|TUBA3C;nc|ENSG00000123416|P68363-2|TUBA1B;nc|ENSG00000127824|P68366-2|TUBA4A;nc|ENSG00000167552|Q71U36-2|TUBA1A;nc|ENSG00000198033|P0DPH7-2|TUBA3C;TUBA3C|p.T361Rfs*18|1|0.17|ENSG00000198033|chr13:19174136-19174136|G/-|frameshift_variant;TUBA3D|p.G366Efs*13|1|0.17|ENSG00000075886|chr2:131482588-131482588|G/-|frameshift_variant;TUBA3D|p.V328Pfs*54|1|0.45|ENSG00000075886|chr2:131480665-131480666|-/CCCAAAGA|frameshift_variant	32.75053402867276	0.6462648045997152	5				NaN	NaN	0	NaN	7251	4066	11312
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11330	32.547	NaN	4552.8	30	0	962.93	0.214	+			36370	SETDMVRQI	9	67	539.7644759997855	1077.514399066371	2	539.763916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SETDMVRQI_	ENSG00000149823|ENST00000279281|VPS51	124.08010499294276	0.018729767491916592	5				NaN	NaN	0	NaN	7259	4069	11329
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11331	32.551	NaN	1639.5	30	0	327.57	0.106	+			47577	VRLMLTLTP	9	54	522.3174360129075	1042.6203190926149	2	522.3162841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VRLMLTLTP_	ENSG00000163527|ENST00000295770|STT3B;STT3B|p.E758Nfs*18|1|0.05|ENSG00000163527|chr3:31633017-31633018|-/AAACATTC|frameshift_variant	34.172542307311794	0.4838870758800184	5				NaN	NaN	0	NaN	7260	4069	11329
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11332	32.553	NaN	5934.4	30	0	707.8	0.106				-1	KLMLRAGMIK	10	50	398.23466058988686	1191.6821523698607	3	398.234130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Oxidation (M)	_KLM(Oxidation (M))LRAGM(Oxidation (M))IK_	tr|U7SL08|U7SL08_FUSNUProline--tRNAligaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=proSPE=3SV=1	31.634271133179894	0.6214930414500597	5				NaN	NaN	0	NaN	7261	4069	11329
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11333	32.555	NaN	1720	30	0	160.74	0.106			+	10047	ESDPALKQL	9	63	500.76909988009504	NaN	0	500.76971435546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ESDPALKQL_	REV__ARHGAP5|p.R538S|1|0.27|ENSG00000100852|chr14:32092283-32092283|G/T|missense_variant	71.87747018426188	0.0992163553043454	5				NaN	NaN	0	NaN	7262	4069	11329
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11334	32.556	NaN	1373.4	30	0	131.85	0.106				-1	 	0	39	460.78266664705734	919.5507803609147	2	460.7812805175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7263	4069	11329
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11335	32.558	NaN	1501.4	30	0	226.05	0.034			+	-1	GCKVKAVPP	9	51	478.27277877771826	954.5310046222365	2	478.2715148925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_GC(Carbamidomethyl (C))KVKAVPP_	REV__CEP295|p.L2479Ffs*6|1|0.29|ENSG00000166004|chr11:93729651-93729651|A/-|frameshift_variant;REV__ENSG00000166004|ENST00000325212|CEP295;REV__nc|ENSG00000166004|Q9C0D2-3|CEP295	31.954861631926434	0.5046124803899898	5				NaN	NaN	0	NaN	7264	4069	11329
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11336	32.559	NaN	1363.9	30	0	93.736	0.139				-1	 	0	49	485.8014010197546	969.5882491063093	2	485.79876708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7265	4069	11329
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11347	32.584	NaN	10575	30	0	3501.8	0.214				-1	 	0	64	466.2955510870537	930.5765492409074	2	466.2945556640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7273	4072	11346
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11348	32.588	NaN	1893	30	0	233.88	0.106	+			50658	YEEATCAQAL	10	66	549.7439990359564	1097.4734451387128	2	549.7432861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YEEATCAQAL_	ENSG00000236320|ENST00000674182|SLFN14;nc|ENSG00000236320|P0C7P3-2|SLFN14;SLFN14|p.P780S|1|0.11|ENSG00000236320|chr17:35548640-35548640|G/A|missense_variant	45.97224482568171	0.49411383603842696	5				NaN	NaN	0	NaN	7274	4072	11346
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11349	32.59	NaN	1363.4	30	0	74.51	0.036	+			24173	LENSLIDIM	9	55	532.271534694806	1062.5285164564118	2	532.2717895507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_LENSLIDIM(Oxidation (M))_	CPEB2|p.C544Lfs*12|1|0.1|ENSG00000137449|chr4:15066233-15066234|-/T|frameshift_variant;CPEB2|p.C544Vfs*31|5|0.34|ENSG00000137449|chr4:15066234-15066234|T/-|frameshift_variant;ENSG00000137449|ENST00000538197|CPEB2;ENST00000503926.1_1_4:15009003-15018907:+|nuORF;nc|ENSG00000137449|Q7Z5Q1-3|CPEB2;nc|ENSG00000137449|Q7Z5Q1-4|CPEB2;nc|ENSG00000137449|Q7Z5Q1-5|CPEB2;nc|ENSG00000137449|Q7Z5Q1-6|CPEB2;nc|ENSG00000137449|Q7Z5Q1-7|CPEB2;nc|ENSG00000137449|Q7Z5Q1-8|CPEB2;nc|ENSG00000137449|Q7Z5Q1|CPEB2	51.33545320467046	0.2872990594074956	5				NaN	NaN	0	NaN	7275	4072	11346
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11357	32.61	NaN	2733.7	30	0	324.66	0.214	+			24525	LGLAQKVDP	9	56	470.7775659308439	939.5405789284878	2	470.7761535644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LGLAQKVDP_	CNOT3|p.P458Lfs*45|1|0.17|ENSG00000088038|chr19:54148705-54148705|C/-|frameshift_variant;ENSG00000088038|ENST00000221232|CNOT3	37.15910966729921	0.4535818937225704	5				NaN	NaN	0	NaN	7280	4075	11356
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11358	32.613	NaN	1957.3	30	0	218.69	0.106	+			7325	DATIVVKSY	9	61	498.2749208656311	994.5352887980622	2	498.2734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DATIVVKSY_	ENSG00000130762|ENST00000378378|ARHGEF16	101.25262130126117	0.03792372629710479	5				NaN	NaN	0	NaN	7281	4075	11356
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11359	32.615	NaN	1704	30	0	393.45	0.106	+			24255	LETSNARAVI	10	57	537.3012320745607	NaN	0	537.30126953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LETSNARAVI_	ENSG00000124493|ENST00000538487|GRM4;GRM4|p.A697Pfs*126|1|0.38|ENSG00000124493|chr6:34036022-34036022|G/-|frameshift_variant;nc|ENSG00000124493|Q14833-2|GRM4;nc|ENSG00000124493|Q14833-3|GRM4;nc|ENSG00000124493|Q14833-4|GRM4;nc|ENSG00000124493|Q14833-5|GRM4	47.95952297671804	0.31850267256932663	5				NaN	NaN	0	NaN	7282	4075	11356
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11360	32.617	NaN	1994.4	30	0	392.43	0.036				-1	GRCGSCRLT	9	59	533.7467920304954	1065.4790311277907	2	533.7459106445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_GRC(Carbamidomethyl (C))GSC(Carbamidomethyl (C))RLT_	ENST00000470664.1_1_2:202013700-202014764:+|nuORF	47.657333605630114	0.33044192980041115	5				NaN	NaN	0	NaN	7283	4075	11356
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11367	32.635	NaN	5649.7	30	0	1354.4	0.214				-1	 	0	65	544.2758880670336	1086.5372232008672	2	544.2747802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7287	4078	11366
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11368	32.639	NaN	3199.9	30	0	349.37	0.106	+			14355	GTAALGCLVK	10	60	495.2748423777511	NaN	0	495.2745056152344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GTAALGC(Carbamidomethyl (C))LVK_	ENST00000390555.3_1_14:106135325-106136152:-|nuORF;nc|ENSG00000211896|P01857-1|IGHG1;nc|ENSG00000211896|P01857|IGHG1;nc|ENSG00000211897|P01860-1|IGHG3;nc|ENSG00000211897|P01860|IGHG3	85.16082228582465	0.07406536248925066	5				NaN	NaN	0	NaN	7288	4078	11366
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11369	32.64	NaN	2095.5	30	0	130.73	0.106				-1	RGLPTIASMA	10	65	516.7770949489061	1031.539636964612	2	516.7750854492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_RGLPTIASM(Oxidation (M))A_	SLC7A4|p.L11M|1|0.21|ENSG00000099960|chr22:21031782-21031782|G/T|missense_variant	40.77816245573522	0.5419747034533848	5				NaN	NaN	0	NaN	7289	4078	11366
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11370	32.642	NaN	1127.6	30	0	80.162	0.038	+			23289	KYLYVDKNF	9	62	595.3177298949295	1188.6209068566588	2	595.317138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KYLYVDKNF_	ENSG00000100345|ENST00000216181|MYH9;MYH9|p.I784*|1|0.07|ENSG00000100345|chr22:36304036-36304036|G/-|frameshift_variant	51.52775601994872	0.28504342437107444	5				NaN	NaN	0	NaN	7290	4078	11366
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11380	32.664	NaN	4875.3	30	0	900.41	0.214				-1	DTMAHLISP	9	61	500.7427717627914	999.4709905923828	2	500.7418518066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_DTM(Oxidation (M))AHLISP_	ENSG00000141568|ENST00000335255|FOXK2;ENST00000527313.6_1_17:80477872-80529633:+|nuORF;ENST00000570585.1_1_17:80478172-80529779:+|nuORF;nc|ENSG00000141568|Q01167-2|FOXK2;nc|ENSG00000141568|Q01167-3|FOXK2	53.351449002276354	0.2690372970092375	5				NaN	NaN	0	NaN	7297	4081	11379
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11381	32.668	NaN	2045.4	30	0	305.93	0.106			+	47891	VSLHGVASL	9	46	441.755940972625	NaN	0	441.7555847167969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSLHGVASL_	REV__ENST00000498689.5_1_20:54967438-54967576:+|nuORF	37.15910966729921	0.2899585034171616	5				NaN	NaN	0	NaN	7298	4081	11379
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11382	32.67	NaN	2152.9	30	0	190.11	0.106			+	46415	VEQAHEQLY	9	59	558.7704115381284	1115.5262701430568	2	558.7708740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VEQAHEQLY_	REV__ENSG00000080608|ENST00000397885|PUM3	51.33545320467046	0.2872990594074956	5				NaN	NaN	0	NaN	7299	4081	11379
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11383	32.672	NaN	1415.4	30	0	84.358	0.106				-1	RVRDCRKLEV	10	58	665.8681792685104	NaN	0	665.8687133789062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_RVRDC(Carbamidomethyl (C))RKLEV_	ENSG00000102218|ENST00000218340|RP2	30.317721548370564	0.4006274431774794	5				NaN	NaN	0	NaN	7300	4081	11379
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11384	32.673	NaN	2188.6	30	0	166.5	0.034				-1	LGIAMTGIIG	10	57	481.2722140002189	NaN	0	481.2722473144531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_LGIAM(Oxidation (M))TGIIG_	tr|U7SUD7|U7SUD7_FUSNUNa+/H+antiporterNhaC-likeC-terminaldomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01195PE=3SV=1	38.80614096846853	0.372755673314885	5				NaN	NaN	0	NaN	7301	4081	11379
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11397	32.701	NaN	5073.2	30	0	602.42	0.214				-1	 	0	59	464.26180303201255	926.5090531308251	2	464.2605285644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7311	4084	11396
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11398	32.704	NaN	3091	30	0	341.38	0.106	+			2118	ALHILPGAE	9	53	460.76422730507034	919.5139016769407	2	460.7630920410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ALHILPGAE_	ENST00000261455.8_2_1:212583858-212588226:-|nuORF	47.91560031466742	0.327412564698279	5				NaN	NaN	0	NaN	7312	4084	11396
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11399	32.706	NaN	2590.7	30	0	325.42	0.034	+			12403	GEAEGLMKV	9	57	467.2400815743457	932.4656102154914	2	467.239013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEAEGLMKV_	ENSG00000157637|ENST00000374759|SLC38A10;nc|ENSG00000157637|Q9HBR0-2|SLC38A10;nc|ENSG00000157637|Q9HBR0-3|SLC38A10;SLC38A10|p.R413W|1|0.54|ENSG00000157637|chr17:81260289-81260289|G/A|missense_variant	65.46538089061403	0.16805504838372562	5				NaN	NaN	0	NaN	7313	4084	11396
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11411	32.732	NaN	8544.9	30	0	989.79	0.214	+			12619	GEIDGNKVTL	10	66	523.2810459912123	1044.5475390492245	2	523.28271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEIDGNKVTL_	ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232319904-232323320:-|nuORF	56.632244143249146	0.3964695498866976	5				NaN	NaN	0	NaN	7322	4087	11410
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11412	32.735	NaN	4127.5	30	0	542.77	0.106	+			35735	SDRPCLVVL	9	60	501.2747092467937	1000.5348655603874	2	501.27423095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SDRPCLVVL_	ENSG00000198198|ENST00000634258|SZT2;nc|ENSG00000198198|Q5T011-4|SZT2;nc|ENSG00000198198|Q5T011-5|SZT2;SZT2|p.A1115Lfs*4|1|0.26|ENSG00000198198|chr1:43427358-43427358|G/-|frameshift_variant;SZT2|p.H875Tfs*13|1|0.16|ENSG00000198198|chr1:43425177-43425178|-/C|frameshift_variant;SZT2|p.L1644Ffs*4|1|0.36|ENSG00000198198|chr1:43431727-43431728|-/T|frameshift_variant;SZT2|p.P2844Rfs*9|1|0.34|ENSG00000198198|chr1:43443669-43443669|C/-|frameshift_variant;SZT2|p.R3241Afs*11|1|0.33|ENSG00000198198|chr1:43448401-43448401|G/-|frameshift_variant	60.97194046774394	0.20551255781574032	5				NaN	NaN	0	NaN	7323	4087	11410
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11413	32.737	NaN	1921	30	0	217.68	0.106	+			50467	YAEVGRVL	8	56	453.75667630913784	905.4987996850757	2	453.7557678222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YAEVGRVL_	ANKRD17|p.L2249Yfs*84|1|0.34|ENSG00000132466|chr4:73090884-73090884|G/-|frameshift_variant;ENSG00000131503|ENST00000360839|ANKHD1;ENSG00000132466|ENST00000358602|ANKRD17;ENST00000514252.1_1_4:73978989-74017230:-|nuORF;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1;nc|ENSG00000132466|O75179-2|ANKRD17;nc|ENSG00000132466|O75179-6|ANKRD17;nc|ENSG00000132466|O75179-7|ANKRD17	71.87747018426188	0.391254423828572	5				NaN	NaN	0	NaN	7324	4087	11410
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11414	32.739	NaN	1549.9	30	0	190.54	0.106	+			7602	DKADIFAFGL	10	55	548.7861109284021	1095.557668923604	2	548.7858276367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DKADIFAFGL_	ENSG00000168078|ENST00000301905|PBK;nc|ENSG00000168078|Q96KB5-2|PBK	32.81241826257853	0.6118718159329168	5				NaN	NaN	0	NaN	7325	4087	11410
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11415	32.741	NaN	2566.2	30	0	144.22	0.106	+			49709	VYLPTHTSL	9	62	515.7801264027747	1029.5456998723494	2	515.7802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VYLPTHTSL_	ENSG00000007944|ENST00000356840|MYLIP	47.91560031466742	0.327412564698279	5				NaN	NaN	0	NaN	7326	4087	11410
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11416	32.743	NaN	2021.8	30	0	253.21	0.106	+			45503	TYETKTALL	9	55	520.2882663563336	1038.561979779467	2	520.2875366210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TYETKTALL_	ENSG00000100242|ENST00000689035|SUN2;nc|ENSG00000100242|Q9UH99-2|SUN2;nc|ENSG00000100242|Q9UH99-3|SUN2	30.317721548370564	0.5199124245378496	5				NaN	NaN	0	NaN	7327	4087	11410
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11417	32.744	NaN	1070.3	30	0	69.112	0.034	+			27966	MVLGTGLRC	9	49	475.250533724794	948.4865145163881	2	475.2491149902344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MVLGTGLRC_	ENSG00000138463|ENST00000261038|SLC49A4;nc|ENSG00000138463|Q96SL1-2|SLC49A4	53.351449002276354	0.2690372970092375	5				NaN	NaN	0	NaN	7328	4087	11410
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11429	32.77	NaN	2480.5	30	0	251.03	0.214	+			13025	GEVLISRV	8	50	436.76479858396283	871.5150442347257	2	436.76348876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEVLISRV_	AP2M1|p.I386Hfs*6|1|0.17|ENSG00000161203|chr3:184182844-184182845|-/C|frameshift_variant;ENSG00000161203|ENST00000292807|AP2M1;ENST00000466598.5_1_3:183894781-183896942:+|nuORF;ENST00000472560.5_1_3:183894781-183898834:+|nuORF;ENST00000484469.5_1_3:183894781-183895400:+|nuORF;ENST00000487958.5_1_3:183894781-183898060:+|nuORF;nc|ENSG00000161203|Q96CW1-2|AP2M1	67.49366992349736	0.4277823096851425	5				NaN	NaN	0	NaN	7337	4090	11428
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11430	32.774	NaN	1847.7	30	0	248.38	0.106				-1	RMQATYSF	8	61	510.23524539936875	1018.4559378655375	2	510.2340393066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_RM(Oxidation (M))QATYSF_	ENST00000564919.1_1_16:8947421-8948174:+|nuORF	35.61828744233558	0.6843154725607303	5				NaN	NaN	0	NaN	7338	4090	11428
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11431	32.776	NaN	2224	30	0	807.26	0.106				-1	 	0	51	477.78582107575556	953.5570892183111	2	477.78466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7339	4090	11428
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11432	32.777	NaN	1742	30	0	189.71	0.106	+			50421	YAATIASKL	9	57	469.2720785448852	936.5296041565704	2	469.2705383300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YAATIASKL_	ENSG00000102554|ENST00000377687|KLF5;nc|ENSG00000102554|Q13887-2|KLF5;nc|ENSG00000102554|Q13887-4|KLF5	37.81151784470057	0.4459294069877048	5				NaN	NaN	0	NaN	7340	4090	11428
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11433	32.779	NaN	1375.1	30	0	113.04	0.035	+			9619	ELPLPDQQP	9	59	518.7698396664713	1035.5251263997425	2	518.7691650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ELPLPDQQP_	CYFIP1|p.K121Nfs*2|1|0.14|ENSG00000273749|chr15:22944582-22944582|T/-|frameshift_variant;CYFIP2|p.Q484Rfs*7|1|0.08|ENSG00000055163|chr5:157319855-157319856|-/GA|frameshift_variant;ENSG00000055163|ENST00000620254|CYFIP2;ENSG00000273749|ENST00000617928|CYFIP1;nc|ENSG00000055163|Q96F07|CYFIP2	51.19269402634007	0.2889735674168909	5				NaN	NaN	0	NaN	7341	4090	11428
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11450	32.814	NaN	3445.8	30	0	1017.1	0.214	+			50515	YAPFVGGTGPG	11	67	511.7513363356407	1021.4881197380814	2	511.750732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YAPFVGGTGPG_	ENSG00000266074|ENST00000675386|BAHCC1;nc|ENSG00000266074|Q9P281|BAHCC1	42.396135135203025	0.5251566046092361	5				NaN	NaN	0	NaN	7355	4093	11449
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11451	32.818	NaN	2098.9	30	0	287.22	0.106				-1	 	0	37	336.5348459125663	1006.582708337899	3	336.5340881347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7356	4093	11449
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11452	32.82	NaN	1691.1	30	0	165.38	0.106			+	13922	GRPGLALNVY	10	59	530.3021593212464	1058.5897657092928	2	530.3013305664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GRPGLALNVY_	REV__ENSG00000004777|ENST00000007510|ARHGAP33;REV__nc|ENSG00000004777|O14559-10|ARHGAP33;REV__nc|ENSG00000004777|O14559-11|ARHGAP33	44.116797842482775	0.5112108506279902	5				NaN	NaN	0	NaN	7357	4093	11449
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11453	32.822	NaN	1655.9	30	0	140	0.106			+	50362	WVRGEGLTP	9	69	507.7730675349879	1013.5315821367758	2	507.7318420410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_WVRGEGLTP_	REV__ENST00000334801.7_1_11:118780860-118781538:-|nuORF	49.44154591367651	0.3095138337212152	5				NaN	NaN	0	NaN	7358	4093	11449
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11454	32.823	NaN	1049.6	30	0	265.13	0.106			+	50299	WSLGITGI	8	35	423.73774561905043	NaN	0	423.7378234863281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_WSLGITGI_	REV__ENSG00000197496|ENST00000359271|SLC2A10	35.200714571348534	1.7418937515398478	5				NaN	NaN	0	NaN	7359	4093	11449
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11455	32.825	NaN	2425.7	30	0	347.39	0.037	+			10630	EYNSDLHQF	9	60	576.7528221651341	1151.4910913970682	2	576.7518920898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EYNSDLHQF_	BUB1|p.V819Gfs*61|1|0.11|ENSG00000169679|chr2:110642126-110642127|-/C|frameshift_variant;ENSG00000169679|ENST00000302759|BUB1;ENST00000465029.5_1_2:111419157-111435602:-|nuORF;nc|ENSG00000169679|O43683-2|BUB1;nc|ENSG00000169679|O43683-3|BUB1	62.107414245175825	0.1960472003779324	5				NaN	NaN	0	NaN	7360	4093	11449
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11456	32.826	NaN	1571.2	30	0	200.18	0.143			+	29571	PFFSWFKKL	9	54	600.331650308932	1198.648747684664	2	600.32958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PFFSWFKKL_	REV__ENST00000468146.5_1_3:52720039-52723083:+|nuORF	49.44154591367651	0.3095138337212152	5				NaN	NaN	0	NaN	7361	4093	11449
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11469	32.856	NaN	8941.2	30	0	1405.4	0.214	+			6247	AVSHAERAL	9	64	477.26087012108695	952.5071873089739	2	477.2593688964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVSHAERAL_	ENSG00000105278|ENST00000262961|ZFR2;ZFR2|p.G634Afs*20|1|0.07|ENSG00000105278|chr19:3819075-3819075|C/-|frameshift_variant	58.78195531508484	0.22376836668196862	5				NaN	NaN	0	NaN	7371	4096	11468
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11470	32.859	NaN	3468.7	30	0	296.31	0.106			+	-1	YVNMGSAQVL	10	73	549.268402672933	1096.522252412666	2	549.2677612304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_YVNM(Oxidation (M))GSAQVL_	REV__ENSG00000183605|ENST00000355697|SFXN4;REV__nc|ENSG00000183605|Q6P4A7-2|SFXN4;REV__nc|ENSG00000183605|Q6P4A7-3|SFXN4	62.107414245175825	0.3466735403679669	5				NaN	NaN	0	NaN	7372	4096	11468
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11471	32.861	NaN	5138.8	30	0	936.67	0.106	+			44497	TSSIMQKLK	9	60	518.2965523505211	1034.578551767842	2	518.2959594726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TSSIMQKLK_	CEP350|p.I2751Nfs*29|1|0.24|ENSG00000135837|chr1:180094350-180094351|-/A|frameshift_variant;CEP350|p.N2889Ifs*10|1|0.38|ENSG00000135837|chr1:180095671-180095671|A/-|frameshift_variant;CEP350|p.R2078Gfs*6|1|0.43|ENSG00000135837|chr1:180084119-180084119|A/-|frameshift_variant;CEP350|p.Y2613Mfs*8|1|0.07|ENSG00000135837|chr1:180093938-180093938|T/-|frameshift_variant;ENSG00000135837|ENST00000367607|CEP350	76.7741389293348	0.11149722112137898	5				NaN	NaN	0	NaN	7373	4096	11468
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11472	32.863	NaN	9841.9	30	0	3627.4	0.106	+			14997	GTMTGMLYK	9	69	501.244333112778	1000.474113292356	2	501.24322509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTMTGMLYK_	ENSG00000178440|ENST00000651763|TIMM23B-AGAP6;ENSG00000204152|ENST00000651259|TIMM23B;ENSG00000265354|ENST00000580018|TIMM23;nc|ENSG00000204152|Q5SRD1-2|TIMM23B	79.71258880314673	0.09879134589249085	5				NaN	NaN	0	NaN	7374	4096	11468
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11473	32.865	NaN	6428.3	30	0	2718.2	0.106	+			24971	LLCGVVDFAR	10	51	364.8667376121478	1091.5783834366434	3	364.86590576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LLCGVVDFAR_	CXADR|p.N201Mfs*27|1|0.28|ENSG00000154639|chr21:17560727-17560727|A/-|frameshift_variant;ENSG00000154639|ENST00000284878|CXADR;nc|ENSG00000154639|P78310-2|CXADR;nc|ENSG00000154639|P78310-3|CXADR;nc|ENSG00000154639|P78310-4|CXADR;nc|ENSG00000154639|P78310-5|CXADR;nc|ENSG00000154639|P78310-6|CXADR;nc|ENSG00000154639|P78310-7|CXADR	31.954861631926434	0.6188749698950511	5				NaN	NaN	0	NaN	7375	4096	11468
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11474	32.867	NaN	1577.1	30	0	201.66	0.106	+			28595	NKMNRKMN	8	60	526.2623291015625	NaN	0	526.2623291015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_NKM(Oxidation (M))NRKMN_	ENST00000478981.1_1_15:59956254-59956317:-|nuORF	42.47446043378293	1.7418937515398478	5				NaN	NaN	0	NaN	7376	4096	11468
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11475	32.868	NaN	2545.6	30	0	234.53	0.038			+	-1	MRRPSPAFPE	10	65	602.3009031685547	1202.5872534039092	2	602.2999877929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_M(Oxidation (M))RRPSPAFPE_	REV__ENST00000532131.1_1_1:36644121-36644906:+|nuORF	42.86426827375447	0.522752283233888	5				NaN	NaN	0	NaN	7377	4096	11468
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11487	32.893	NaN	2575.1	30	0	323.06	0.214	+			34831	RYMEVSGNL	9	64	534.762063787106	1067.5095746410118	2	534.761474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RYMEVSGNL_	ENSG00000183431|ENST00000373019|SF3A3	51.19269402634007	0.2889735674168909	5				NaN	NaN	0	NaN	7386	4099	11486
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11488	32.897	NaN	1882.5	30	0	312.06	0.106	+			963	AEKALFRAL	9	36	340.20691159296933	1017.598905379108	3	340.2062683105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEKALFRAL_	ENSG00000055044|ENST00000264279|NOP58;ENSG00000101361|ENST00000329276|NOP56	37.81151784470057	0.4459294069877048	5				NaN	NaN	0	NaN	7387	4099	11486
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11489	32.899	NaN	3160.1	30	0	311.64	0.106				-1	 	0	55	460.78266664705734	919.5507803609147	2	460.78125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7388	4099	11486
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11490	32.901	NaN	1639.4	30	0	597.2	0.106	+			15654	GVLRVTPCIP	10	32	352.2067299205821	1053.5983603619463	3	352.2059631347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GVLRVTPCIP_	ENSG00000151835|ENST00000382292|SACS;nc|ENSG00000151835|Q9NZJ4-2|SACS;SACS|p.I3485Lfs*10|1|0.24|ENSG00000151835|chr13:23333423-23333423|T/-|frameshift_variant;SACS|p.K2931Nfs*22|1|0.23|ENSG00000151835|chr13:23335083-23335083|T/-|frameshift_variant;SACS|p.L2871Ffs*29|1|0.26|ENSG00000151835|chr13:23335263-23335264|-/A|frameshift_variant;SACS|p.L3102*|1|0.33|ENSG00000151835|chr13:23334571-23334571|A/-|frameshift_variant;SACS|p.S4423Ffs*42|1|0.18|ENSG00000151835|chr13:23330610-23330611|-/G|frameshift_variant	16.473147378115264	0.7327422906225664	5				NaN	NaN	0	NaN	7389	4099	11486
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11491	32.902	NaN	2217.6	30	0	641.83	0.106	+			32627	QYSDINNRW	9	65	598.2790362202633	1194.5435195073264	2	598.2785034179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QYSDINNRW_	ENSG00000173898|ENST00000533211|SPTBN2;nc|ENSG00000173898|O15020-2|SPTBN2;SPTBN2|p.P924Qfs*35|1|0.39|ENSG00000173898|chr11:66701629-66701629|G/-|frameshift_variant	49.44154591367651	0.3095138337212152	5				NaN	NaN	0	NaN	7390	4099	11486
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11492	32.904	NaN	2372.4	30	0	299.13	0.106				-1	FLGPMACPVL	10	68	552.7816015926526	1103.548650252105	2	553.2818603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_FLGPMAC(Carbamidomethyl (C))PVL_	COL5A1|p.E361Rfs*197|1|0.21|ENSG00000130635|chr9:134730388-134730388|G/-|frameshift_variant	44.53106598305862	0.5073935772121767	5				NaN	NaN	0	NaN	7391	4099	11486
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11493	32.906	NaN	1683.5	30	0	142.24	0.035				-1	MARFAARLG	9	57	504.7738037109375	NaN	0	504.7738037109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_M(Oxidation (M))ARFAARLG_	ENSG00000127125|ENST00000372561|PPCS;ENST00000472013.1_1_1:42922230-42922863:+|nuORF;PPCS|p.L132Qfs*58|1|0.35|ENSG00000127125|chr1:42456960-42456961|TG/-|frameshift_variant	29.14955571784316	0.3303970763161698	5				NaN	NaN	0	NaN	7392	4099	11486
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11507	32.933	NaN	10884	30	0	1812.1	0.214				-1	 	0	70	485.8014010197546	969.5882491063093	2	485.8002624511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7403	4102	11506
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11508	32.937	NaN	16366	30	0	3316	0.106				-1	 	0	75	521.7832024859932	1041.5518520387864	2	521.78271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7404	4102	11506
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11509	32.939	NaN	5831.7	30	0	983.5	0.106	+			6988	CQILCIYQ	8	63	492.23935364332647	982.464154353453	2	492.239013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_CQILCIYQ_	ENST00000374379.8_1_1:25140698-25153599:+|nuORF	37.15910966729921	0.6739408393984688	5				NaN	NaN	0	NaN	7405	4102	11506
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11510	32.94	NaN	2504	30	0	164.28	0.106	+			17728	IENNKAVVY	9	57	525.2855033670179	NaN	0	525.2854614257812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IENNKAVVY_	tr|U7STZ3|U7STZ3_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01040PE=4SV=1	65.46538089061403	0.1260090208616529	5				NaN	NaN	0	NaN	7406	4102	11506
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11511	32.942	NaN	2892.1	30	0	194.14	0.106	+			43111	TERDLREVF	9	61	582.8054810330535	1163.596409132907	2	582.8048706054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TERDLREVF_	ENSG00000136527|ENST00000453386|TRA2B;ENSG00000164548|ENST00000297071|TRA2A;ENST00000494255.5_1_7:23547037-23556014:-|nuORF;nc|ENSG00000136527|P62995-3|TRA2B;nc|ENSG00000164548|Q13595-2|TRA2A;nc|ENSG00000164548|Q13595-3|TRA2A;nc|ENSG00000164548|Q13595-4|TRA2A	35.15202426646627	0.4747332964206883	5				NaN	NaN	0	NaN	7407	4102	11506
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11512	32.944	NaN	2486.5	30	0	365.21	0.037	+			9350	EIRFEIEDV	9	68	575.2941184772819	1148.5736840213638	2	575.7952880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EIRFEIEDV_	ENSG00000196876|ENST00000627620|SCN8A;nc|ENSG00000196876|Q9UQD0-3|SCN8A;nc|ENSG00000196876|Q9UQD0-5|SCN8A;nc|ENSG00000196876|Q9UQD0|SCN8A	56.43379154798735	0.2433427591689151	5				NaN	NaN	0	NaN	7408	4102	11506
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11513	32.945	NaN	2681.4	30	0	302.8	0.14				-1	MHPGIGTL	8	53	421.2165148816576	840.4184768301152	2	421.71673583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_M(Oxidation (M))HPGIGTL_	ENSG00000063176|ENST00000245222|SPHK2;nc|ENSG00000063176|Q9NRA0-2|SPHK2;nc|ENSG00000063176|Q9NRA0-3|SPHK2;nc|ENSG00000063176|Q9NRA0-4|SPHK2	44.53106598305862	0.628196326904373	5				NaN	NaN	0	NaN	7409	4102	11506
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11523	32.968	NaN	6737	30	0	1478.3	0.214				-1	 	0	53	471.7566238960902	941.4986948589805	2	471.7555236816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7416	4105	11522
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11524	32.972	NaN	3368.8	30	0	1381.3	0.106				-1	SMKSFLAKR	9	38	361.8701045191166	1082.5884841575498	3	361.8696594238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_SM(Oxidation (M))KSFLAKR_	DYNC2H1|p.L4021Wfs*5|1|0.3|ENSG00000187240|chr11:103358262-103358262|T/-|frameshift_variant;DYNC2H1|p.P3966Hfs*44|1|0.22|ENSG00000187240|chr11:103321194-103321194|T/-|frameshift_variant;ENSG00000187240|ENST00000375735|DYNC2H1;nc|ENSG00000187240|Q8NCM8-2|DYNC2H1	30.317721548370564	0.5199124245378496	5				NaN	NaN	0	NaN	7417	4105	11522
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11525	32.974	NaN	2194.5	30	0	184.79	0.106			+	-1	KEMSLTEKVK	10	65	604.8309899214989	1207.6474269097978	2	604.8290405273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_KEM(Oxidation (M))SLTEKVK_	REV__ENSG00000186472|ENST00000333891|PCLO;REV__nc|ENSG00000186472|Q9Y6V0-6|PCLO;REV__PCLO|p.E1944Sfs*8|1|0.34|ENSG00000186472|chr7:82955124-82955124|T/-|frameshift_variant;REV__PCLO|p.K2442Sfs*2|4|0.29|ENSG00000186472|chr7:82953628-82953628|T/-|frameshift_variant;REV__PCLO|p.K3621Ifs*26|1|0.04|ENSG00000186472|chr7:82949726-82949727|-/CCAGATA|frameshift_variant;REV__PCLO|p.K4306Gfs*8|1|0.04|ENSG00000186472|chr7:82915067-82915070|TTTT/-|frameshift_variant;REV__PCLO|p.M3036Tfs*24|1|0.06|ENSG00000186472|chr7:82951481-82951482|-/G|frameshift_variant;REV__PCLO|p.N4248Kfs*31|1|0.28|ENSG00000186472|chr7:82915242-82915243|-/T|frameshift_variant;REV__PCLO|p.P1234Afs*11|1|0.31|ENSG00000186472|chr7:82966089-82966090|-/T|frameshift_variant;REV__PCLO|p.P2408Lfs*36|1|0.44|ENSG00000186472|chr7:82953730-82953730|G/-|frameshift_variant;REV__PCLO|p.Q3062Tfs*25|1|0.2|ENSG00000186472|chr7:82951405-82951406|-/G|frameshift_variant;REV__PCLO|p.S1913Vfs*9|1|0.32|ENSG00000186472|chr7:82955216-82955216|T/-|frameshift_variant;REV__PCLO|p.T3933Nfs*47|1|0.06|ENSG00000186472|chr7:82916188-82916189|-/T|frameshift_variant;REV__PCLO|p.T5069Qfs*20|1|0.11|ENSG00000186472|chr7:82760722-82760722|T/-|frameshift_variant;REV__PCLO|p.V1883Ffs*29|1|0.09|ENSG00000186472|chr7:82955307-82955307|T/-|frameshift_variant;REV__PCLO|p.Y3007Lfs*2|1|0.28|ENSG00000186472|chr7:82951935-82951936|-/A|frameshift_variant	36.31764250033197	0.5830761606467809	5				NaN	NaN	0	NaN	7418	4105	11522
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11526	32.976	NaN	2082.4	30	0	387.91	0.106			+	15313	GTVEKWLQ	8	60	480.7603454589844	NaN	0	480.7603454589844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTVEKWLQ_	REV__ENSG00000128573|ENST00000350908|FOXP2;REV__ENST00000412402.5_1_7:114271612-114299479:+|nuORF;REV__ENST00000441290.6_1_7:114271612-114296599:+|nuORF;REV__nc|ENSG00000128573|O15409-2|FOXP2;REV__nc|ENSG00000128573|O15409-4|FOXP2;REV__nc|ENSG00000128573|O15409-6|FOXP2;REV__nc|ENSG00000128573|O15409-7|FOXP2;REV__nc|ENSG00000128573|O15409-9|FOXP2	39.252832667884924	1.7418937515398478	5				NaN	NaN	0	NaN	7419	4105	11522
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11527	32.977	NaN	1626.9	30	0	133.67	0.106	+			33968	RSEKPMAEDP	10	48	580.2753345988194	1158.5361162644388	2	580.2738647460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RSEKPMAEDP_	ENSG00000107290|ENST00000224140|SETX;nc|ENSG00000107290|Q7Z333-3|SETX;nc|ENSG00000107290|Q7Z333-4|SETX;SETX|p.F1748Sfs*3|1|0.55|ENSG00000107290|chr9:132326355-132326355|A/-|frameshift_variant;SETX|p.G1252Dfs*9|2|0.2|ENSG00000107290|chr9:132327843-132327843|C/-|frameshift_variant;SETX|p.I2020Nfs*4|1|0.32|ENSG00000107290|chr9:132295919-132295920|-/T|frameshift_variant;SETX|p.N1361Ifs*53|1|0.11|ENSG00000107290|chr9:132327516-132327516|T/-|frameshift_variant;SETX|p.S1600*|1|0.07|ENSG00000107290|chr9:132326800-132326801|-/A|frameshift_variant;SETX|p.T2478Sfs*35|1|0.35|ENSG00000107290|chr9:132264836-132264840|TATGG/-|frameshift_variant	27.047317107675042	0.6589519614906109	5				NaN	NaN	0	NaN	7420	4105	11522
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11528	32.979	NaN	1535.5	30	0	92.945	0.037			+	51538	YWTVKKGDQ	9	57	562.7873116423701	NaN	0	562.7874755859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YWTVKKGDQ_	REV__ENSG00000110619|ENST00000380525|CARS1;REV__ENST00000439280.6_1_11:3050478-3078655:-|nuORF;REV__ENST00000526890.5_1_11:3050224-3063461:-|nuORF;REV__ENST00000531387.5_1_11:3022346-3069017:-|nuORF;REV__nc|ENSG00000110619|P49589-2|CARS1;REV__nc|ENSG00000110619|P49589|CARS1	32.81241826257853	0.3119040447479903	5				NaN	NaN	0	NaN	7421	4105	11522
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11541	33.007	NaN	12440	30	0	1789.2	0.214	+			27158	MCPFQVTLA	9	73	505.2463446080156	1008.4781362828312	2	505.2451477050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MCPFQVTLA_	ENST00000367608.6_1_6:142688909-142691321:+|nuORF	76.7741389293348	0.11149722112137898	5				NaN	NaN	0	NaN	7431	4108	11540
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11542	33.011	NaN	2605.5	30	0	554.46	0.106	+			17788	IETLTKTAL	9	58	495.2985922978068	988.5826316624136	2	495.2971496582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IETLTKTAL_	ENSG00000197879|ENST00000648651|MYO1C;nc|ENSG00000197879|O00159-2|MYO1C;nc|ENSG00000197879|O00159-3|MYO1C	67.49366992349736	0.1516260258713357	5				NaN	NaN	0	NaN	7432	4108	11540
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11543	33.013	NaN	1511.5	30	0	175.75	0.106			+	-1	LISNLCCEM	9	59	549.734755508667	1097.454958084134	2	549.7350463867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_LISNLC(Carbamidomethyl (C))CEM(Oxidation (M))_	REV__ENSG00000054654|ENST00000555002|SYNE2;REV__ENST00000557005.1_1_14:64490935-64514966:+|nuORF;REV__nc|ENSG00000054654|Q8WXH0|SYNE2;REV__SYNE2|p.A5240Qfs*5|1|0.07|ENSG00000054654|chr14:64152639-64152639|G/-|frameshift_variant;REV__SYNE2|p.D3074Ffs*8|1|0.07|ENSG00000054654|chr14:64053132-64053133|-/TTTCTTTTTCAAATACTTG|frameshift_variant;REV__SYNE2|p.F2563Ifs*28|1|0.34|ENSG00000054654|chr14:64051593-64051594|-/A|frameshift_variant;REV__SYNE2|p.F2840Lfs*3|1|0.38|ENSG00000054654|chr14:64052427-64052427|T/-|frameshift_variant;REV__SYNE2|p.F4992Lfs*13|1|0.39|ENSG00000054654|chr14:64140067-64140067|T/-|frameshift_variant;REV__SYNE2|p.L5308Ifs*18|1|0.12|ENSG00000054654|chr14:64158750-64158751|GG/-|frameshift_variant;REV__SYNE2|p.S6651Rfs*83|1|0.29|ENSG00000054654|chr14:64220596-64220597|-/G|frameshift_variant	26.69291269510374	0.5537881896960711	5				NaN	NaN	0	NaN	7433	4108	11540
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11544	33.015	NaN	1828.4	30	0	231.48	0.106			+	-1	EIKRSCGGY	9	63	535.2583353416619	1068.5021177501237	2	535.2579345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_EIKRSC(Carbamidomethyl (C))GGY_	REV__ENST00000498143.5_1_10:75335691-75335772:-|nuORF	45.9519527083369	0.35044536499095585	5				NaN	NaN	0	NaN	7434	4108	11540
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11545	33.016	NaN	1517	30	0	210.49	0.036	+			43856	TLWSFSLAY	9	63	544.2744750976562	NaN	0	544.2744750976562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TLWSFSLAY_	ENST00000238616.9_1_14:75549190-75549412:-|nuORF	25.450171626174864	0.34907449758287085	5				NaN	NaN	0	NaN	7435	4108	11540
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11554	33.036	NaN	1904.4	30	0	861.24	0.214			+	-1	ASFLPRLE	8	55	487.7701194582587	973.5256859833174	2	487.76885986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))ASFLPRLE_	REV__ENST00000540670.6_1_19:5720276-5720402:-|nuORF	47.657333605630114	0.6087971902037268	5				NaN	NaN	0	NaN	7441	4111	11553
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11555	33.04	NaN	1442.6	30	0	219.58	0.106				-1	SMGLCLMLL	9	51	527.2627365237361	1052.510920114272	2	527.2596435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_SMGLC(Carbamidomethyl (C))LM(Oxidation (M))LL_	ENSG00000283654|ENST00000637218|CIROP;nc|ENSG00000283654|A0A1B0GTW7-2|CIROP;nc|ENSG00000283654|A0A1B0GTW7-3|CIROP	33.51558372728122	0.4900267029546261	5				NaN	NaN	0	NaN	7442	4111	11553
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11556	33.042	NaN	1951.8	30	0	190.61	0.106			+	47926	VSLVLFPV	8	52	437.27508605942063	872.5356191856413	2	437.2734680175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSLVLFPV_	REV__ENSG00000015520|ENST00000381160|NPC1L1;REV__nc|ENSG00000015520|Q9UHC9-2|NPC1L1;REV__nc|ENSG00000015520|Q9UHC9-3|NPC1L1;REV__nc|ENSG00000015520|Q9UHC9-4|NPC1L1;REV__nc|ENSG00000015520|Q9UHC9|NPC1L1	44.53106598305862	0.628196326904373	5				NaN	NaN	0	NaN	7443	4111	11553
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11557	33.044	NaN	1202.1	30	0	169.59	0.106	+			40847	SVETPQDVLR	10	53	572.3047870378028	1142.5950211424056	2	572.3036499023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVETPQDVLR_	ENSG00000143167|ENST00000367868|GPA33	27.047317107675042	0.6589519614906109	5				NaN	NaN	0	NaN	7444	4111	11553
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11558	33.046	NaN	1312.8	30	0	218.84	0.106				-1	 	0	52	451.27228459232987	900.5300162514598	2	451.2703857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7445	4111	11553
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11559	33.047	NaN	2087	30	0	262.49	0.106			+	47512	VQNESSGLQLV	11	64	587.3104784076544	1172.6064038821087	2	587.8117065429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VQNESSGLQLV_	REV__ENST00000225724.9_1_17:28849715-28849805:+|nuORF	53.08895987439943	0.38514566451266113	5				NaN	NaN	0	NaN	7446	4111	11553
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11560	33.049	NaN	1079.3	30	0	118.11	0.035			+	25503	LPSLAFPNLG	10	60	514.7910849015952	1027.5676168699904	2	514.789306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LPSLAFPNLG_	REV__ENSG00000123636|ENST00000392783|BAZ2B;REV__nc|ENSG00000226266|Q9UIF8-2|BAZ2B;REV__nc|ENSG00000226266|Q9UIF8-3|BAZ2B;REV__nc|ENSG00000226266|Q9UIF8-4|BAZ2B;REV__nc|ENSG00000226266|Q9UIF8-5|BAZ2B	36.31764250033197	0.5830761606467809	5				NaN	NaN	0	NaN	7447	4111	11553
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11569	33.071	NaN	6176.4	30	0	536.88	0.214	+			26348	LTAATLPKVK	10	68	521.3378478059193	1040.6611426786385	2	521.3375244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LTAATLPKVK_	ENST00000595443.5_1_19:39327988-39329682:-|nuORF	85.16082228582465	0.15877915086237185	5				NaN	NaN	0	NaN	7453	4114	11568
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11570	33.074	NaN	2145.6	30	0	255.51	0.106	+			45406	TVVDLFFIP	9	66	525.7949466848972	NaN	0	525.7949829101562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVVDLFFIP_	ENSG00000176567|ENST00000320048|OR4X1;OR4X1|p.G302Efs*3|1|0.18|ENSG00000176567|chr11:48264761-48264761|G/-|frameshift_variant	38.80614096846853	0.28164298475537564	5				NaN	NaN	0	NaN	7454	4114	11568
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11571	33.076	NaN	1693	30	0	135.55	0.036	+			42998	TEKKIPVVF	9	63	530.8252211175575	1059.6358893019149	2	530.8245239257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TEKKIPVVF_	ENSG00000139684|ENST00000378720|ESD	49.44154591367651	0.3095138337212152	5				NaN	NaN	0	NaN	7455	4114	11568
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11579	33.095	NaN	1589.9	30	0	204.33	0.214			+	45807	VAIGHGWLQ	9	56	490.7689519425663	NaN	0	490.7690124511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VAIGHGWLQ_	REV__A1CF|p.V393Cfs*32|1|0.04|ENSG00000148584|chr10:50814027-50814028|-/A|frameshift_variant;REV__A1CF|p.V393Ffs*3|1|0.04|ENSG00000148584|chr10:50814028-50814029|-/TAAAA|frameshift_variant;REV__ENSG00000148584|ENST00000373997|A1CF;REV__nc|ENSG00000148584|Q9NQ94-3|A1CF;REV__nc|ENSG00000148584|Q9NQ94-4|A1CF;REV__nc|ENSG00000148584|Q9NQ94-5|A1CF;REV__nc|ENSG00000148584|Q9NQ94|A1CF	47.91560031466742	0.22105767942158736	5				NaN	NaN	0	NaN	7460	4117	11578
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11580	33.098	NaN	3033.1	30	0	277.97	0.106	+			37322	SLDWLCHLL	9	68	550.2827132236333	1098.5508735140666	2	550.2803344726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLDWLCHLL_	ENSG00000173821|ENST00000582970|RNF213;ENST00000559070.5_1_17:78261823-78310301:+|nuORF;nc|ENSG00000173821|Q63HN8-4|RNF213;nc|ENSG00000173821|Q63HN8-5|RNF213;nc|ENSG00000173821|Q63HN8|RNF213;RNF213|p.C5022Lfs*7|1|0.3|ENSG00000173821|chr17:80389237-80389237|G/-|frameshift_variant;RNF213|p.P2167Lfs*64|1|0.09|ENSG00000173821|chr17:80344834-80344835|-/T|frameshift_variant;RNF213|p.Q1953Rfs*50|2|0.13|ENSG00000173821|chr17:80340219-80340219|C/-|frameshift_variant	42.47446043378293	0.39123495718708534	5				NaN	NaN	0	NaN	7461	4117	11578
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11581	33.1	NaN	1476.8	30	0	139.81	0.106	+			1110	AELKMTGNCL	10	63	568.7759201988795	NaN	0	568.77587890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_AELKMTGNC(Carbamidomethyl (C))L_	ENSG00000113460|ENST00000336767|BRIX1;ENST00000510960.5_1_5:34915843-34922894:+|nuORF	51.52775601994872	0.29594378441454594	5				NaN	NaN	0	NaN	7462	4117	11578
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11582	33.102	NaN	2447.1	30	0	161.18	0.106	+			1869	AILKDVQCE	9	65	509.76484354038377	1017.5151341475676	2	509.7635498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AILKDVQCE_	nc|ENSG00000282639|A0A0J9YX35|IGHV3-64D	42.396135135203025	0.392153681582562	5				NaN	NaN	0	NaN	7463	4117	11578
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11583	33.104	NaN	1269.6	30	0	154.32	0.106				-1	SLFQILCGAV	10	62	554.2963256835938	NaN	0	554.2963256835938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_SLFQILC(Carbamidomethyl (C))GAV_	ENSG00000197658|ENST00000612278|SLC22A24;nc|ENSG00000197658|Q8N4F4-3|SLC22A24;SLC22A24|p.H495Pfs*31|1|0.32|ENSG00000197658|chr11:63081034-63081035|-/G|frameshift_variant	45.97224482568171	0.33106653400957564	5				NaN	NaN	0	NaN	7464	4117	11578
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11584	33.106	NaN	1316.8	30	0	148.48	0.04	+			2334	AMRAARLPRYQ	11	56	666.8702128702142	NaN	0	666.8706665039062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AMRAARLPRYQ_	B4GALNT4|p.L874M|1|0.2|ENSG00000182272|chr11:379997-379997|C/A|missense_variant	24.519189625965996	0.45614437233802635	5				NaN	NaN	0	NaN	7465	4117	11578
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11591	33.122	NaN	7675.1	30	0	1815.7	0.214			+	27244	MEPRNEIY	8	70	526.2469270781316	1050.4793012230632	2	526.24609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MEPRNEIY_	REV__ENSG00000115504|ENST00000431489|EHBP1;REV__nc|ENSG00000115504|Q8NDI1-2|EHBP1;REV__nc|ENSG00000115504|Q8NDI1|EHBP1	40.5726180659479	0.6527593143185008	5				NaN	NaN	0	NaN	7469	4120	11590
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11592	33.126	NaN	2058.4	30	0	375.71	0.106			+	48444	VTKTMAPK	8	51	438.2542907790374	874.4940286248748	2	438.2530822753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTKTMAPK_	REV__ARPP21|p.A382V|1|0.26|ENSG00000172995|chr3:35721754-35721754|C/T|missense_variant	44.116797842482775	0.6307669463330267	5				NaN	NaN	0	NaN	7470	4120	11590
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11593	33.128	NaN	2452.8	30	0	775.33	0.106				-1	 	0	56	477.78582107575556	953.5570892183111	2	478.2853698730469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7471	4120	11590
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11594	33.13	NaN	1772.4	30	0	197.51	0.106	+			33730	RPIQALGTEY	10	64	574.3090124418953	NaN	0	574.308837890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RPIQALGTEY_	ENSG00000275395|ENST00000616721|FCGBP;FCGBP-ACSS2|1|fusion;FCGBP|p.G150Afs*25|1|0.19|ENSG00000275395|chr19:39927915-39927915|G/-|frameshift_variant;nc|ENSG00000275395|Q9Y6R7|FCGBP	35.17822180527639	0.3846679649904324	5				NaN	NaN	0	NaN	7472	4120	11590
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11595	33.131	NaN	3263	30	0	440.05	0.036	+			41576	SVQGAALVQIK	11	67	557.3360445995438	1112.6575362658875	2	557.337646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVQGAALVQIK_	chr16:1980544-1980641|439|11.94|0.64|4.22|-|ENST00000566005|NOXO1,NOXO1;chr16:1980728-1980939|449|16.41|0.86|4.26|-|ENST00000566005|NOXO1,NOXO1;ENSG00000196408|ENST00000356120|NOXO1;nc|ENSG00000196408|Q8NFA2-2|NOXO1;nc|ENSG00000196408|Q8NFA2-4|NOXO1;nc|ENSG00000196408|Q8NFA2|NOXO1	120.03343029724402	0.02011667187481704	5				NaN	NaN	0	NaN	7473	4120	11590
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11603	33.151	NaN	8338.8	30	0	1560.5	0.214	+			14828	GTLIDNQFK	9	68	518.2779149309862	1034.5412769287723	2	518.7771606445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTLIDNQFK_	ENSG00000018610|ENST00000644802|STEEP1;ENST00000469448.1_1_X:118673692-118676584:-|nuORF;nc|ENSG00000018610|Q9H5V9-2|STEEP1;nc|ENSG00000018610|Q9H5V9-3|STEEP1	63.53385203322761	0.18415635464017938	5				NaN	NaN	0	NaN	7478	4123	11602
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11604	33.155	NaN	3919.4	30	0	531.99	0.106			+	11224	FIDRRQIP	8	66	522.8015335614431	1043.588514189686	2	522.8004760742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FIDRRQIP_	REV__ENSG00000204991|ENST00000378247|SPIRE2;REV__ENST00000569108.5_1_16:89916567-89936677:+|nuORF;REV__nc|ENSG00000204991|Q8WWL2-3|SPIRE2;REV__nc|ENSG00000204991|Q8WWL2-4|SPIRE2	42.47446043378293	0.6409579893742323	5				NaN	NaN	0	NaN	7479	4123	11602
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11605	33.157	NaN	4214	30	0	1391.4	0.106	+			27024	LYSLYKKY	8	69	539.301836363652	1076.589119794104	2	539.3003540039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LYSLYKKY_	tr|U7SUS8|U7SUS8_FUSNUGH3auxin-responsivepromoterOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00992PE=4SV=1	63.30626980617807	0.4690498839812213	5				NaN	NaN	0	NaN	7480	4123	11602
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11606	33.159	NaN	2265.6	30	0	212.62	0.106			+	10720	FADGMGMAAL	10	53	492.22059787912366	982.4266428250473	2	492.2189025878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FADGMGMAAL_	REV__ENSG00000197641|ENST00000344731|SERPINB13;REV__nc|ENSG00000197641|Q9UIV8-2|SERPINB13	51.33545320467046	0.4446945571623749	5				NaN	NaN	0	NaN	7481	4123	11602
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11607	33.16	NaN	2190.7	30	0	234.98	0.106			+	40191	STRGVPLLQ	9	57	485.7875876630265	969.560622392853	2	485.7865295410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STRGVPLLQ_	REV__ENSG00000258484|ENST00000310673|SPESP1	40.77816245573522	0.41113185337114944	5				NaN	NaN	0	NaN	7482	4123	11602
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11608	33.162	NaN	3271.9	30	0	334.37	0.106			+	41882	SVTNDVIQL	9	57	494.7658479537214	NaN	0	494.76605224609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVTNDVIQL_	REV__ENSG00000169554|ENST00000627532|ZEB2;REV__nc|ENSG00000169554|O60315-2|ZEB2;REV__ZEB2|p.F904Ifs*47|1|0.04|ENSG00000169554|chr2:144398477-144398478|-/CAAGGAT|frameshift_variant	45.97224482568171	0.23445038899310136	5				NaN	NaN	0	NaN	7483	4123	11602
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11609	33.164	NaN	1933.2	30	0	298.27	0.035			+	26601	LTYCRRAL	8	62	498.2743292727482	NaN	0	498.2748107910156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LTYCRRAL_	REV__ENSG00000183246|ENST00000433039|RIMBP3C;REV__ENSG00000274600|ENST00000620804|RIMBP3B;REV__ENSG00000275793|ENST00000619918|RIMBP3;REV__RIMBP3B|p.G1589Afs*9|1|0.16|ENSG00000274600|chr22:21388619-21388619|G/-|frameshift_variant	53.351449002276354	1.7418937515398478	5				NaN	NaN	0	NaN	7484	4123	11602
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11619	33.186	NaN	15483	30	0	2487	0.215	+			14829	GTLIDNQFK	9	71	518.2779149309862	1034.5412769287723	2	518.2772827148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTLIDNQFK_	ENSG00000018610|ENST00000644802|STEEP1;ENST00000469448.1_1_X:118673692-118676584:-|nuORF;nc|ENSG00000018610|Q9H5V9-2|STEEP1;nc|ENSG00000018610|Q9H5V9-3|STEEP1	109.47833844074708	0.029530294723441826	5				NaN	NaN	0	NaN	7491	4126	11618
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11620	33.189	NaN	3253.3	30	0	278.04	0.106	+			32936	REANFTVSSM	10	66	571.2700886228473	1140.5256243124945	2	571.2689819335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_REANFTVSSM_	ENSG00000141543|ENST00000649764|EIF4A3;ENST00000575978.1_1_17:78111144-78112096:-|nuORF	61.691277971877994	0.35045824941635534	5				NaN	NaN	0	NaN	7492	4126	11618
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11621	33.191	NaN	1666.5	30	0	218.59	0.106	+			21588	KPIESFNEY	9	59	563.7758259753642	1125.5370990175284	2	563.774658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KPIESFNEY_	ENSG00000085788|ENST00000397166|DDHD2;ENSG00000107651|ENST00000369075|SEC23IP;nc|ENSG00000085788|O94830-2|DDHD2	65.46538089061403	0.16805504838372562	5				NaN	NaN	0	NaN	7493	4126	11618
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11622	33.193	NaN	2085.5	30	0	136.18	0.106			+	11251	FILHGLLM	8	61	472.27467373998	942.53479454676	2	472.2733459472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FILHGLLM_	REV__ENSG00000135845|ENST00000344529|PIGC;REV__PIGC|p.D165*|1|0.4|ENSG00000135845|chr1:172442130-172442131|-/A|frameshift_variant	43.626045697637714	0.6338121648150432	5				NaN	NaN	0	NaN	7494	4126	11618
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11623	33.195	NaN	3016.5	30	0	1124.2	0.106	+			9124	EGLGFRSKY	9	60	528.7780481410367	1055.5415433488733	2	528.7769165039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EGLGFRSKY_	NETO2|p.A154S|1|0.29|ENSG00000171208|chr16:47128346-47128346|C/A|missense_variant	46.45678178249821	0.34452392205506005	5				NaN	NaN	0	NaN	7495	4126	11618
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11624	33.197	NaN	973.98	30	0	189.32	0.106	+			17358	IALFNIAF	8	40	454.765044662502	907.5155363918041	2	454.76300048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IALFNIAF_	tr|U7T2A0|U7T2A0_FUSNUGlutamate--tRNAligaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=gltXPE=3SV=1	23.036711822280957	0.7814608874307191	5				NaN	NaN	0	NaN	7496	4126	11618
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11625	33.199	NaN	988.56	30	0	161.9	0.037				-1	KKQLRDLCG	9	39	373.2097534135503	NaN	0	373.21014404296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_KKQLRDLC(Carbamidomethyl (C))G_	ENSG00000129204|ENST00000574788|USP6;ENST00000575709.5_1_17:5042349-5076270:+|nuORF;nc|ENSG00000129204|P35125-2|USP6;nc|ENSG00000129204|P35125-3|USP6;USP6|p.E983Gfs*34|1|0.12|ENSG00000129204|chr17:5162911-5162912|-/G|frameshift_variant;USP6|p.L931Pfs*6|1|0.06|ENSG00000129204|chr17:5155567-5155568|CA/-|frameshift_variant;USP6|p.R1206Gfs*38|1|0.11|ENSG00000129204|chr17:5170574-5170574|G/-|frameshift_variant	19.996771675451527	0.3693019437812985	5				NaN	NaN	0	NaN	7497	4126	11618
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11636	33.222	NaN	6310	30	0	881.68	0.214				-1	 	0	66	465.7765672021236	929.5385814710472	2	465.7756042480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7505	4129	11635
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11637	33.226	NaN	4551.4	30	0	1603.5	0.106	+			14998	GTMTGMLYK	9	58	501.244333112778	1000.474113292356	2	501.24359130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTMTGMLYK_	ENSG00000178440|ENST00000651763|TIMM23B-AGAP6;ENSG00000204152|ENST00000651259|TIMM23B;ENSG00000265354|ENST00000580018|TIMM23;nc|ENSG00000204152|Q5SRD1-2|TIMM23B	87.69643885390035	0.07135982304947239	5				NaN	NaN	0	NaN	7506	4129	11635
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11638	33.228	NaN	6521.9	30	0	1199	0.106	+			33251	RGDLPWNLQR	10	77	627.8395457991526	1253.664538665105	2	627.8388061523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RGDLPWNLQR_	ENST00000592887.1_1_17:76993904-77002146:-|nuORF	69.6276240434122	0.2803623802747859	5				NaN	NaN	0	NaN	7507	4129	11635
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11639	33.23	NaN	7454.1	30	0	1057.9	0.106				-1	SCSKSELISK	10	72	569.7916609372761	1137.5687689413521	2	569.791259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_SC(Carbamidomethyl (C))SKSELISK_	ENSG00000108395|ENST00000262294|TRIM37;ENST00000582852.1_1_17:57141714-57157166:-|nuORF;nc|ENSG00000108395|O94972-2|TRIM37;nc|ENSG00000108395|O94972-3|TRIM37;TRIM37|p.P935Rfs*15|1|0.29|ENSG00000108395|chr17:59001606-59001606|G/-|frameshift_variant	59.93077597824379	0.36646980200755325	5				NaN	NaN	0	NaN	7508	4129	11635
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11640	33.231	NaN	5505.9	30	0	1093.3	0.106			+	27468	MLPVSPATEQ	10	64	536.7704597937138	1071.5263666542276	2	536.7698974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MLPVSPATEQ_	REV__ENST00000447332.3_1_1:155030369-155030429:+|nuORF	71.87747018426188	0.26198133118427214	5				NaN	NaN	0	NaN	7509	4129	11635
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11641	33.233	NaN	2777.6	30	0	652.97	0.106	+			37747	SLTTPVVSVA	10	58	487.28131356327503	NaN	0	487.28167724609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLTTPVVSVA_	ENSG00000116604|ENST00000348159|MEF2D;nc|ENSG00000116604|Q14814-2|MEF2D;nc|ENSG00000116604|Q14814-3|MEF2D;nc|ENSG00000116604|Q14814-4|MEF2D;nc|ENSG00000116604|Q14814-5|MEF2D;nc|ENSG00000116604|Q14814-6|MEF2D	49.44154591367651	0.30913310806145605	5				NaN	NaN	0	NaN	7510	4129	11635
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11642	33.235	NaN	2290.6	30	0	225.28	0.035			+	6743	CCLRFLAL	8	51	498.2625625734972	994.5105722137944	2	498.2615661621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_C(Carbamidomethyl (C))CLRFLAL_	REV__ENST00000264431.8_1_4:160279426-160279690:+|nuORF	44.53106598305862	0.628196326904373	5				NaN	NaN	0	NaN	7511	4129	11635
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11652	33.257	NaN	4240.4	30	0	1065.1	0.214				-1	 	0	69	507.7833391482854	1013.5521253633708	2	507.7825012207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7518	4132	11651
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11653	33.26	NaN	2215.4	30	0	135.94	0.106	+			20002	KEIETTGTYQL	11	64	641.8314587468392	1281.6483645604783	2	641.8295288085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEIETTGTYQL_	ENSG00000007171|ENST00000313735|NOS2;nc|ENSG00000007171|P35228-2|NOS2;NOS2|p.A650Pfs*53|1|0.21|ENSG00000007171|chr17:27769063-27769063|C/-|frameshift_variant;NOS2|p.Y709*|1|0.33|ENSG00000007171|chr17:27767745-27767745|G/-|frameshift_variant	100.81924332030881	0.058993442163212936	5				NaN	NaN	0	NaN	7519	4132	11651
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11654	33.262	NaN	2179.9	30	0	381.83	0.106	+			15326	GTVITSVIK	9	50	459.28775985435436	916.5609667755087	2	459.2862243652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTVITSVIK_	ENSG00000120690|ENST00000239882|ELF1;nc|ENSG00000120690|P32519-2|ELF1	47.95952297671804	0.32689736945648856	5				NaN	NaN	0	NaN	7520	4132	11651
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11655	33.264	NaN	2995.6	30	0	523.38	0.106	+			11860	FTCLSDAVKT	10	70	542.7704654713422	1083.5263780094842	2	542.769287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FTCLSDAVKT_	tr|U7SL68|U7SL68_FUSNUTriosephosphateisomeraseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=tpiAPE=3SV=1	41.42661286455405	0.5359995577334734	5				NaN	NaN	0	NaN	7521	4132	11651
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11656	33.266	NaN	1563.5	30	0	162.49	0.106			+	-1	CVYLWCLPV	9	54	576.7820546929998	1151.5495564527996	2	576.7809448242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_C(Carbamidomethyl (C))VYLWCLPV_	REV__ENST00000374023.7_2_6:34557337-34557511:-|nuORF	39.021493756699265	0.43173687394350213	5				NaN	NaN	0	NaN	7522	4132	11651
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11657	33.268	NaN	2900.5	30	0	428.57	0.106			+	-1	IRAWMAARV	9	54	545.3020574867061	1088.589562040212	2	545.3013916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_IRAWM(Oxidation (M))AARV_	REV__ENST00000561650.5_2_15:52860567-52860696:-|nuORF	23.04248740728303	0.5879033540491928	5				NaN	NaN	0	NaN	7523	4132	11651
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11658	33.27	NaN	1739.2	30	0	313.5	0.035				-1	 	0	36	336.53485844037834	1006.5827459213351	3	336.5342712402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7524	4132	11651
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11671	33.298	NaN	13140	30	0	2521.5	0.214				-1	SAYNMLAKR	9	66	535.2761737138103	1068.5377944944205	2	535.2754516601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_SAYNM(Oxidation (M))LAKR_	tr|U7SFN5|U7SFN5_FUSNURegulatoryproteinRecXOS=FusobacteriumnucleatumCTI-5OX=1316586GN=recXPE=3SV=1	84.9155231211612	0.07920012719736333	5				NaN	NaN	0	NaN	7534	4135	11670
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11672	33.301	NaN	8603	30	0	1042	0.106			+	22275	KTCEQAGKSI	10	73	532.7732339455889	1063.5319149579777	2	532.7725830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTCEQAGKSI_	REV__ENSG00000121879|ENST00000263967|PIK3CA	90.60085204095205	0.12763388345653318	5				NaN	NaN	0	NaN	7535	4135	11670
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11673	33.303	NaN	6107.5	30	0	1772.8	0.106	+			47557	VRCMHLLL	8	60	500.7758866646427	999.5372203960854	2	500.774658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_VRCM(Oxidation (M))HLLL_	ENSG00000130508|ENST00000252804|PXDN;nc|ENSG00000130508|Q92626-2|PXDN;PXDN|p.C857Afs*5|2|0.33|ENSG00000130508|chr2:1649212-1649212|G/-|frameshift_variant;PXDN|p.E1339Lfs*66|1|0.26|ENSG00000130508|chr2:1639361-1639362|-/AG|frameshift_variant;PXDN|p.G470Rfs*19|1|0.14|ENSG00000130508|chr2:1664962-1664963|-/T|frameshift_variant;PXDN|p.N1190Mfs*12|1|0.22|ENSG00000130508|chr2:1648211-1648211|T/-|frameshift_variant;PXDN|p.N1194Tfs*8|1|0.25|ENSG00000130508|chr2:1648199-1648199|T/-|frameshift_variant;PXDN|p.N865Mfs*25|3|0.42|ENSG00000130508|chr2:1649188-1649188|G/-|frameshift_variant;PXDN|p.R1242Pfs*22|1|0.07|ENSG00000130508|chr2:1644636-1644637|-/AG|frameshift_variant	54.76467175910256	0.5536104764165384	5				NaN	NaN	0	NaN	7536	4135	11670
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11674	33.305	NaN	4314.5	30	0	1390.5	0.106			+	14385	GTAKLKITMLE	11	49	402.2370475095497	1203.689313128849	3	402.236083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTAKLKITMLE_	REV__ENSG00000147488|ENST00000689386|ST18;REV__ENST00000522861.1_1_8:53038570-53045696:-|nuORF;REV__ST18|p.L941Hfs*8|1|0.04|ENSG00000147488|chr8:52118375-52118376|-/AACTTGTGTGAAAATATAT|frameshift_variant	24.231819034082204	0.7356191775841856	5				NaN	NaN	0	NaN	7537	4135	11670
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11675	33.307	NaN	4326.7	30	0	1454.2	0.106				-1	GEEEMIKTY	9	62	558.249642205272	1114.484731477344	2	558.2496948242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_GEEEM(Oxidation (M))IKTY_	ENST00000514482.1_1_4:190862182-190882061:+|nuORF	32.81241826257853	0.4965981579233955	5				NaN	NaN	0	NaN	7538	4135	11670
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11676	33.309	NaN	1014.3	30	0	88.018	0.106	+			25253	LNLALVAE	8	46	421.7528773390113	NaN	0	421.7528381347656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LNLALVAE_	ENSG00000127481|ENST00000375254|UBR4;nc|ENSG00000127481|Q5T4S7-2|UBR4;nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000127481|Q5T4S7-4|UBR4;UBR4|p.L4771Cfs*7|1|0.25|ENSG00000127481|chr1:19088878-19088878|G/-|frameshift_variant	55.50420428727701	1.7418937515398478	5				NaN	NaN	0	NaN	7539	4135	11670
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11677	33.311	NaN	1397.9	30	0	196.5	0.034	+			26960	LYIQKGIS	8	54	461.27508220104573	920.5356114688915	2	461.2741394042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LYIQKGIS_	ENSG00000115368|ENST00000314761|WDR75;ENST00000436347.5_1_2:190313199-190340140:+|nuORF	47.91560031466742	0.6071945918984287	5				NaN	NaN	0	NaN	7540	4135	11670
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11688	33.334	NaN	4132.1	30	0	590	0.214	+			10102	ESLLHRAY	8	62	494.7620720623453	987.5095911914906	2	494.7590637207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ESLLHRAY_	ENSG00000148343|ENST00000684074|MIGA2;nc|ENSG00000148343|Q7L4E1-3|MIGA2	44.116797842482775	0.6307669463330267	5				NaN	NaN	0	NaN	7548	4138	11687
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11689	33.338	NaN	1546.2	30	0	194.32	0.106			+	34151	RSYDLSSV	8	52	463.733306550077	925.452060166954	2	463.7320556640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RSYDLSSV_	REV__ENSG00000164327|ENST00000357387|RICTOR;REV__ENST00000503698.1_1_5:38954866-38959404:-|nuORF;REV__nc|ENSG00000164327|Q6R327-3|RICTOR;REV__RICTOR|p.S1495Pfs*13|1|0.05|ENSG00000164327|chr5:38945642-38945643|-/ATTCTGGG|frameshift_variant	47.91560031466742	0.6071945918984287	5				NaN	NaN	0	NaN	7549	4138	11687
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11690	33.34	NaN	1907.6	30	0	147.75	0.033	+			48011	VSQVENLL	8	54	451.2529455943099	900.4913382554198	2	451.25299072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSQVENLL_	ENST00000319080.7_12:122611886-122614151:+|nuORF	47.657333605630114	0.6087971902037268	5				NaN	NaN	0	NaN	7550	4138	11687
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11696	33.354	NaN	2895.6	30	0	570.41	0.214	+			41983	SVYDSVLQK	9	60	519.7778495679356	1037.5411462026711	2	519.7774047851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVYDSVLQK_	ENSG00000131018|ENST00000367255|SYNE1;ENST00000490135.6_1_6:152637953-152655276:-|nuORF;nc|ENSG00000131018|Q8NF91-4|SYNE1;nc|ENSG00000131018|Q8NF91-7|SYNE1;SYNE1|p.E4738Kfs*25|1|0.12|ENSG00000131018|chr6:152330474-152330474|T/-|frameshift_variant;SYNE1|p.E5862Gfs*83|1|0.12|ENSG00000131018|chr6:152300729-152300738|CCAGACTCCT/-|frameshift_variant;SYNE1|p.G6773Wfs*7|1|0.44|ENSG00000131018|chr6:152236186-152236187|-/A|frameshift_variant;SYNE1|p.K6871Rfs*22|2|0.52|ENSG00000131018|chr6:152233881-152233881|T/-|frameshift_variant;SYNE1|p.L8283Pfs*8|1|0.19|ENSG00000131018|chr6:152148173-152148174|-/G|frameshift_variant;SYNE1|p.M5602Nfs*13|2|0.32|ENSG00000131018|chr6:152310779-152310780|-/T|frameshift_variant;SYNE1|p.V8635Sfs*12|1|0.15|ENSG00000131018|chr6:152133375-152133375|T/-|frameshift_variant	69.6276240434122	0.14239879520340665	5				NaN	NaN	0	NaN	7553	4141	11695
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11697	33.358	NaN	3179	30	0	490.47	0.106	+			29805	PKCDGQVL	8	48	430.2217348286544	858.4289167241088	2	430.22039794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PKCDGQVL_	ENSG00000006607|ENST00000264042|FARP2;ENST00000473082.5_1_2:242312627-242344774:+|nuORF;nc|ENSG00000006607|O94887-2|FARP2;nc|ENSG00000006607|O94887-3|FARP2	49.44154591367651	0.597725784090933	5				NaN	NaN	0	NaN	7554	4141	11695
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11698	33.36	NaN	891.73	30	0	248.29	0.106				-1	 	0	32	343.1981510246525	342.1908745580525	1	343.197509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7555	4141	11695
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11699	33.362	NaN	1103.9	30	0	154.65	0.106			+	47637	VSASGLALSL	10	54	459.268687705661	NaN	0	459.2685546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSASGLALSL_	REV__ENST00000431543.6_1_6:112575248-112575670:-|nuORF	66.42927471994793	0.1817757526326617	5				NaN	NaN	0	NaN	7556	4141	11695
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11700	33.363	NaN	1562.9	30	0	129.9	0.106	+			490	AAYNVPLPK	9	54	486.7782701075577	NaN	0	486.77911376953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AAYNVPLPK_	ENSG00000132305|ENST00000410111|IMMT;ENST00000474969.5_1_2:86385703-86422514:-|nuORF;ENST00000486633.1_1_2:86400704-86422514:-|nuORF;nc|ENSG00000132305|Q16891-2|IMMT;nc|ENSG00000132305|Q16891-3|IMMT;nc|ENSG00000132305|Q16891-4|IMMT	49.44154591367651	0.21054156626303966	5				NaN	NaN	0	NaN	7557	4141	11695
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11701	33.365	NaN	1657.8	30	0	105.7	0.106				-1	 	0	51	481.8063795066963	961.5982060801927	2	481.80474853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7558	4141	11695
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11702	33.367	NaN	1446.3	30	0	130.24	0.036	+			46582	VFNVIYQSAA	10	56	556.2916670518989	1110.5687811705977	2	556.2906494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VFNVIYQSAA_	ENSG00000008710|ENST00000262304|PKD1;ENST00000458669.1_1_16:16412841-16418244:+|nuORF;ENST00000472413.5_1_16:15016937-15019904:+|nuORF;ENST00000483731.5_1_16:2156634-2163846:-|nuORF;ENST00000525846.6_1_16:18437791-18443539:-|nuORF;ENST00000532415.5_1_16:18480742-18495490:-|nuORF;ENST00000532739.1_1_16:16450692-16458759:+|nuORF;ENST00000534164.5_1_16:15014190-15019904:+|nuORF;ENST00000536260.5_1_16:16412841-16418555:+|nuORF;ENST00000565639.6_1_16:2156945-2164479:-|nuORF;ENST00000568591.5_1_16:2156634-2167660:-|nuORF;nc|ENSG00000008710|P98161-2|PKD1;nc|ENSG00000008710|P98161-3|PKD1	39.252832667884924	0.5560298534376815	5				NaN	NaN	0	NaN	7559	4141	11695
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11711	33.387	NaN	13084	30	0	1480.3	0.214				-1	 	0	65	466.7567584348972	931.4989639365945	2	466.75555419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7565	4144	11710
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11712	33.391	NaN	9423.2	30	0	1011.5	0.106				-1	 	0	56	478.780825725842	955.5470985184841	2	478.7795104980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7566	4144	11710
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11713	33.393	NaN	4881.9	30	0	401.89	0.106				-1	 	0	59	507.7833391482854	1013.5521253633708	2	508.7849426269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7567	4144	11710
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11714	33.394	NaN	8100.8	30	0	992.52	0.106	+			8124	DYMKTTSNF	9	82	553.745491772128	1105.476430611056	2	553.7450561523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DYMKTTSNF_	ENSG00000165525|ENST00000298310|NEMF;nc|ENSG00000165525|O60524-3|NEMF;nc|ENSG00000165525|O60524-4|NEMF;NEMF|p.K641Rfs*9|1|0.15|ENSG00000165525|chr14:49802721-49802721|T/-|frameshift_variant;NEMF|p.M879*|1|0.12|ENSG00000165525|chr14:49789558-49789558|T/-|frameshift_variant;NEMF|p.M879Nfs*10|1|0.13|ENSG00000165525|chr14:49789557-49789558|-/T|frameshift_variant	140.11223852658463	0.010427410095706195	5				NaN	NaN	0	NaN	7568	4144	11710
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11715	33.396	NaN	1903.9	30	0	319.32	0.034	+			42437	TALLLLPAAG	10	50	470.2980394545964	938.5815259759928	2	470.296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TALLLLPAAG_	ENSG00000198799|ENST00000361127|LRIG2;LRIG2|p.F260Lfs*3|1|0.29|ENSG00000198799|chr1:113094727-113094727|T/-|frameshift_variant	38.80614096846853	0.5601458937078225	5				NaN	NaN	0	NaN	7569	4144	11710
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11726	33.42	NaN	2305.6	30	0	316.76	0.215	+			17144	HSSVPEALMY	10	59	567.2697234752482	1132.5248940172962	2	567.2693481445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HSSVPEALMY_	ENSG00000100985|ENST00000372330|MMP9	71.29570347882199	0.26673431503403816	5				NaN	NaN	0	NaN	7577	4147	11725
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11727	33.423	NaN	3589.8	30	0	346.07	0.106			+	7932	DSIDVPISIK	10	65	543.805170755025	1085.5957885768498	2	543.8042602539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DSIDVPISIK_	REV__CCT3|p.A379Lfs*9|1|0.21|ENSG00000163468|chr1:156312061-156312061|C/-|frameshift_variant;REV__CCT3|p.K197Nfs*23|1|0.17|ENSG00000163468|chr1:156320857-156320857|T/-|frameshift_variant;REV__CCT3|p.L350Ffs*9|1|0.49|ENSG00000163468|chr1:156312146-156312147|-/A|frameshift_variant;REV__ENSG00000163468|ENST00000295688|CCT3;REV__nc|ENSG00000163468|P49368-2|CCT3	43.650786325866115	0.5155049133366767	5				NaN	NaN	0	NaN	7578	4147	11725
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11728	33.425	NaN	2602.7	30	0	762.74	0.106	+			11266	FIQFSKTLY	9	62	573.8129770762625	1145.611401219325	2	573.811767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FIQFSKTLY_	ENSG00000133138|ENST00000357242|TBC1D8B;TBC1D8B|p.F1096Lfs*5|1|0.14|ENSG00000133138|chrX:106873885-106873885|T/-|frameshift_variant	29.14955571784316	0.5308295550522326	5				NaN	NaN	0	NaN	7579	4147	11725
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11729	33.427	NaN	6316.3	30	0	923.52	0.106	+			14775	GTKYIFMVK	9	46	362.8725837894288	1085.5959219684864	3	362.8718566894531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTKYIFMVK_	ENSG00000101871|ENST00000317552|MID1;nc|ENSG00000101871|O15344-2|MID1	68.84614121027924	0.14577793175421136	5				NaN	NaN	0	NaN	7580	4147	11725
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11730	33.429	NaN	2548.3	30	0	251.56	0.106				-1	MQVEREGSLN	10	67	589.7755753027143	1177.5365976722285	2	589.7752685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_M(Oxidation (M))QVEREGSLN_	CCDC180|p.K1351Sfs*28|1|0.14|ENSG00000197816|chr9:97364063-97364063|C/-|frameshift_variant;CCDC180|p.K1583Nfs*17|3|0.32|ENSG00000197816|chr9:97374551-97374551|C/-|frameshift_variant;CCDC180|p.S1054Lfs*19|1|0.44|ENSG00000197816|chr9:97354591-97354591|T/-|frameshift_variant;ENSG00000197816|ENST00000529487|CCDC180;ENST00000375206.6_1_9:100053158-100139173:+|nuORF;ENST00000460482.6_1_9:100070037-100107975:+|nuORF;ENST00000494917.6_1_9:100069637-100105846:+|nuORF;ENST00000529787.2_1_9:100092438-100109914:+|nuORF;ENST00000530011.1_1_9:100092818-100111440:+|nuORF;nc|ENSG00000197816|Q9P1Z9|CCDC180	42.33807565288922	0.5276008846745733	5				NaN	NaN	0	NaN	7581	4147	11725
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11731	33.431	NaN	2118.6	30	0	163.73	0.106			+	32855	RCVNLEKTL	9	57	538.2992787012271	1074.584004469254	2	538.299072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RCVNLEKTL_	REV__ENSG00000131626|ENST00000253925|PPFIA1;REV__nc|ENSG00000131626|Q13136-2|PPFIA1	66.96192283764107	0.15557981141143568	5				NaN	NaN	0	NaN	7582	4147	11725
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11732	33.433	NaN	3115	30	0	260.87	0.035			+	10329	ETSPSLELL	9	65	494.7620720623453	987.5095911914906	2	495.2640686035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ETSPSLELL_	REV__ENSG00000179954|ENST00000389623|SSC5D;REV__ENST00000588254.1_1_19:56000611-56002653:+|nuORF;REV__nc|ENSG00000179954|A1L4H1-2|SSC5D;REV__SSC5D|p.A244Gfs*45|1|0.38|ENSG00000179954|chr19:55490908-55490909|-/G|frameshift_variant;REV__SSC5D|p.A244Rfs*192|1|0.22|ENSG00000179954|chr19:55490909-55490909|G/-|frameshift_variant;REV__SSC5D|p.R1414Efs*7|1|0.42|ENSG00000179954|chr19:55518513-55518513|C/-|frameshift_variant;REV__SSC5D|p.W883Gfs*40|1|0.38|ENSG00000179954|chr19:55501057-55501057|C/-|frameshift_variant	58.78195531508484	0.22376836668196862	5				NaN	NaN	0	NaN	7583	4147	11725
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11743	33.456	NaN	8482.4	30	0	1666.1	0.214				-1	 	0	68	515.793589771002	1029.5726266088038	2	515.792724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7591	4150	11742
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11744	33.46	NaN	5749.8	30	0	1479.6	0.106			+	21242	KLKESMTK	8	58	482.7780741923428	963.5415954514856	2	482.77642822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KLKESMTK_	REV__ENSG00000168386|ENST00000477258|FILIP1L;REV__FILIP1L|p.L673Yfs*5|1|0.1|ENSG00000168386|chr3:99849658-99849658|A/-|frameshift_variant;REV__nc|ENSG00000168386|Q4L180-2|FILIP1L;REV__nc|ENSG00000168386|Q4L180-3|FILIP1L;REV__nc|ENSG00000168386|Q4L180-5|FILIP1L;REV__nc|ENSG00000168386|Q4L180-6|FILIP1L;REV__nc|ENSG00000168386|Q4L180-7|FILIP1L;REV__nc|ENSG00000168386|Q4L180|FILIP1L	49.44154591367651	0.597725784090933	5				NaN	NaN	0	NaN	7592	4150	11742
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11745	33.462	NaN	22707	30	0	7800.6	0.106				-1	 	0	80	329.21884932005025	984.6347185603508	3	329.21826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7593	4150	11742
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11746	33.464	NaN	12949	30	0	1142.1	0.106				-1	 	0	84	493.32490269763304	984.6352524620661	2	493.3233947753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7594	4150	11742
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11747	33.466	NaN	4026.5	30	0	916.93	0.106	+			26662	LVFAERLSE	9	67	532.293554712662	1062.5725564921238	2	532.2928466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LVFAERLSE_	ENSG00000157343|ENST00000373866|ARMC12;nc|ENSG00000157343|Q5T9G4-2|ARMC12;nc|ENSG00000157343|Q5T9G4-3|ARMC12	64.20726635412375	0.17854274437659667	5				NaN	NaN	0	NaN	7595	4150	11742
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11748	33.467	NaN	1039.8	30	0	154.4	0.106			+	24607	LGRLKFAS	8	45	446.27514752255894	890.5357421119179	2	446.27386474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LGRLKFAS_	REV__ENSG00000100479|ENST00000216367|POLE2;REV__ENST00000556584.5_1_14:50131352-50154906:-|nuORF;REV__nc|ENSG00000100479|P56282-2|POLE2;REV__nc|ENSG00000100479|P56282-3|POLE2;REV__POLE2|p.Y457Cfs*9|1|0.25|ENSG00000100479|chr14:49650391-49650392|AT/-|frameshift_variant	31.954861631926434	0.7126016770032289	5				NaN	NaN	0	NaN	7596	4150	11742
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11749	33.469	NaN	2131.4	30	0	157.93	0.036	+			10316	ETRPGPWPR	9	65	548.288690941341	1094.5628289494819	2	549.2904663085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ETRPGPWPR_	ENST00000551727.5_1_12:104531302-104531635:-|nuORF	37.81151784470057	0.4459294069877048	5				NaN	NaN	0	NaN	7597	4150	11742
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11763	33.499	NaN	114070	30	0	33206	0.214				-1	 	0	102	329.21884932005025	984.6347185603508	3	329.21826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7608	4153	11762
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11764	33.503	NaN	21385	30	0	4866.8	0.106				-1	 	0	71	523.3170111398404	1044.6194693464806	2	523.3165283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7609	4153	11762
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11765	33.505	NaN	5019.5	30	0	701.36	0.106				-1	 	0	58	472.74633990762186	943.4781268820437	2	472.7452392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7610	4153	11762
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11766	33.506	NaN	3412.1	30	0	389.05	0.106			+	13923	GRPGLFGPLGP	11	70	534.3045073797937	1066.5944618263873	2	534.3041381835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GRPGLFGPLGP_	REV__ENSG00000169436|ENST00000303045|COL22A1;REV__ENST00000341807.8_1_8:139601498-139734429:-|nuORF;REV__nc|ENSG00000169436|Q8NFW1-2|COL22A1;REV__nc|ENSG00000169436|Q8NFW1-3|COL22A1	35.61828744233558	0.616184410043185	5				NaN	NaN	0	NaN	7611	4153	11762
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11767	33.508	NaN	1598.5	30	0	187.97	0.106			+	10121	ESNGWGFL	8	47	455.2093765896474	908.4042002460948	2	455.20806884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ESNGWGFL_	REV__ENSG00000274523|ENST00000610322|RCC1L;REV__ENST00000420642.1_7:74765936-74789271:+|nuORF;REV__nc|ENSG00000274523|Q96I51-2|RCC1L;REV__nc|ENSG00000274523|Q96I51-3|RCC1L	40.5726180659479	0.6527593143185008	5				NaN	NaN	0	NaN	7612	4153	11762
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11768	33.51	NaN	2331.8	30	0	491.51	0.106				-1	 	0	34	378.2793953583777	754.5442377835554	2	378.2786865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7613	4153	11762
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11769	33.512	NaN	5950	30	0	758.34	0.036				-1	 	0	66	548.288690941341	1094.5628289494819	2	548.2883911132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7614	4153	11762
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11782	33.539	NaN	77244	30	0	11583	0.214				-1	 	0	97	525.7832360740637	1049.5519192149272	2	525.7828979492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7624	4156	11781
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11783	33.543	NaN	23322	30	0	3170.4	0.106				-1	 	0	76	539.3015700399613	1076.5885871467226	2	539.3007202148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7625	4156	11781
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11784	33.545	NaN	19069	30	0	1924.7	0.106			+	6529	AYDGNLHTIT	10	78	552.7691617584981	1103.523770583796	2	552.7681274414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AYDGNLHTIT_	REV__CDH4|p.R666H|1|0.12|ENSG00000179242|chr20:61928415-61928415|G/A|missense_variant	48.601550744091256	0.46988609897316763	5				NaN	NaN	0	NaN	7626	4156	11781
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11785	33.546	NaN	5865.7	30	0	3167.9	0.106				-1	 	0	59	442.8011794223878	883.5878059115756	2	442.7997741699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7627	4156	11781
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11786	33.548	NaN	1727	30	0	503	0.106			+	26654	LVEPLLKR	8	35	323.2153969693828	966.6243615083486	3	323.21466064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LVEPLLKR_	REV__ENSG00000092096|ENST00000354772|SLC22A17;REV__nc|ENSG00000092096|Q8WUG5|SLC22A17	24.20275056022122	0.7724576178584145	5				NaN	NaN	0	NaN	7628	4156	11781
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11787	33.55	NaN	1449.6	30	0	146.99	0.037	+			28022	MYLKTVDKF	9	40	382.2072493331417	NaN	0	382.2071533203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MYLKTVDKF_	ENSG00000196459|ENST00000380579|TRAPPC2;ENSG00000256060|ENST00000543226|TRAPPC2B;nc|ENSG00000196459|P0DI81-2|TRAPPC2;nc|ENSG00000196459|P0DI81-3|TRAPPC2;TRAPPC2|p.E69K|1|0.42|ENSG00000196459|chrX:13716567-13716567|C/T|missense_variant;TRAPPC2B|p.E69K|1|0.22|ENSG00000256060|chr19:57365038-57365038|G/A|missense_variant;TRAPPC2B|p.Y115Mfs*25|1|0.08|ENSG00000256060|chr19:57365173-57365173|T/-|frameshift_variant	30.317721548370564	0.32449924987115025	5				NaN	NaN	0	NaN	7629	4156	11781
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11788	33.551	NaN	2254.8	30	0	229.58	0.14	+			7144	DACTLAEKY	9	64	507.234016106284	NaN	0	507.23358154296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DACTLAEKY_	ENSG00000146955|ENST00000537763|RAB19;nc|ENSG00000146955|A4D1S5-2|RAB19	54.776311868738084	0.17377682019723872	5				NaN	NaN	0	NaN	7630	4156	11781
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11798	33.574	NaN	12822	30	0	4530.3	0.214			+	33866	RRLFVLTQ	8	72	516.8194522393738	1031.6243515455476	2	516.818603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RRLFVLTQ_	REV__ENST00000296498.3_1_4:119259441-119273552:-|nuORF	63.30626980617807	0.4690498839812213	5				NaN	NaN	0	NaN	7637	4159	11797
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11799	33.577	NaN	2651.8	30	0	306.67	0.106			+	35908	SEFNIKSL	8	54	469.2527289376685	936.490904942137	2	469.2526550292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEFNIKSL_	REV__MSH2|p.M83I|1|0.33|ENSG00000095002|chr2:47408438-47408438|G/T|missense_variant	40.77816245573522	0.6514838689002179	5				NaN	NaN	0	NaN	7638	4159	11797
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11800	33.579	NaN	2712.3	30	0	192.57	0.106	+			36463	SEVMGEPHL	9	55	499.7348959974527	997.4552390617055	2	499.7339172363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEVMGEPHL_	ENSG00000132963|ENST00000380842|POMP	60.97194046774394	0.20551255781574032	5				NaN	NaN	0	NaN	7639	4159	11797
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11801	33.581	NaN	1939.1	30	0	223.8	0.106	+			19499	KATMLFFHFL	10	61	627.8394550306557	1253.6643571281113	2	627.837158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KATMLFFHFL_	ENSG00000170581|ENST00000314128|STAT2;ENST00000556140.5_1_12:56748997-56753873:-|nuORF;nc|ENSG00000170581|P52630-4|STAT2	31.529811441608018	0.6223461015008678	5				NaN	NaN	0	NaN	7640	4159	11797
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11802	33.583	NaN	1522.3	30	0	146.49	0.106	+			32094	QSFPSGGAAVP	11	53	509.2544750318647	NaN	0	509.2538757324219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QSFPSGGAAVP_	ENSG00000137414|ENST00000259963|FAM8A1	51.52775601994872	0.30434581687306933	5				NaN	NaN	0	NaN	7641	4159	11797
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11803	33.585	NaN	1109.6	30	0	155.23	0.106			+	38063	SPSIQPPPK	9	51	475.7684726108907	NaN	0	475.731689453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SPSIQPPPK_	REV__ENSG00000141376|ENST00000407086|BCAS3;REV__nc|ENSG00000141376|Q9H6U6-3|BCAS3;REV__nc|ENSG00000141376|Q9H6U6-6|BCAS3;REV__nc|ENSG00000141376|Q9H6U6-7|BCAS3;REV__nc|ENSG00000141376|Q9H6U6-8|BCAS3;REV__nc|ENSG00000141376|Q9H6U6|BCAS3	51.33545320467046	0.19748963086191895	5				NaN	NaN	0	NaN	7642	4159	11797
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11804	33.587	NaN	1630.3	30	0	145.06	0.035			+	8440	EARIYSGLL	9	66	511.2881604009477	1020.5617678686954	2	512.253662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EARIYSGLL_	REV__F8|p.P1780S|1|0.3|ENSG00000185010|chrX:154906455-154906455|G/A|missense_variant	29.14955571784316	0.5308295550522326	5				NaN	NaN	0	NaN	7643	4159	11797
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11815	33.612	NaN	6902.7	30	0	979.81	0.214				-1	 	0	64	472.28312029716034	942.5516876611207	2	472.2818603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7651	4162	11814
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11816	33.615	NaN	2957.5	30	0	289.1	0.106				-1	 	0	60	480.27515866437665	958.5357643955533	2	480.27435302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7652	4162	11814
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11817	33.617	NaN	1727.1	30	0	317.35	0.106	+			11195	FHHLGKRI	8	41	336.53485844037834	1006.5827459213351	3	336.5343322753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FHHLGKRI_	ENSG00000152595|ENST00000361056|MEPE;nc|ENSG00000152595|Q9NQ76-2|MEPE	13.775330524044264	0.789990904165365	5				NaN	NaN	0	NaN	7653	4162	11814
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11818	33.619	NaN	1986.3	30	0	461.48	0.106	+			23872	LDGAQIPR	8	52	435.24633482859474	868.4781167239895	2	435.2453308105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LDGAQIPR_	ENSG00000169710|ENST00000306749|FASN	39.252832667884924	0.6609488554722044	5				NaN	NaN	0	NaN	7654	4162	11814
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11819	33.621	NaN	1812.6	30	0	203.85	0.035	+			25839	LSDYVKVSN	9	61	512.7694076021119	NaN	0	512.7711181640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSDYVKVSN_	ENSG00000119203|ENST00000238112|CPSF3	42.396135135203025	0.2590952873412954	5				NaN	NaN	0	NaN	7655	4162	11814
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11830	33.645	NaN	7729.7	30	0	1969.4	0.214			+	9675	ELVEYTNTM	9	74	558.249642205272	1114.484731477344	2	558.2484741210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ELVEYTNTM(Oxidation (M))_	REV__ENSG00000064393|ENST00000406875|HIPK2;REV__nc|ENSG00000064393|Q9H2X6-2|HIPK2;REV__nc|ENSG00000064393|Q9H2X6-3|HIPK2	51.33545320467046	0.2872990594074956	5				NaN	NaN	0	NaN	7663	4165	11829
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11831	33.648	NaN	3638.4	30	0	327.17	0.106			+	24181	LEPNVPQPK	9	68	511.2881604009477	1020.5617678686954	2	511.28753662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LEPNVPQPK_	REV__ENSG00000189253|ENST00000329862|TRIM64B;REV__ENSG00000204450|ENST00000533122|TRIM64;REV__ENSG00000214891|ENST00000617704|TRIM64C	49.44154591367651	0.3095138337212152	5				NaN	NaN	0	NaN	7664	4165	11829
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11832	33.65	NaN	1550.2	30	0	141.61	0.106			+	49370	VVSTQFSAV	9	59	469.2527289376685	936.490904942137	2	469.75152587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVSTQFSAV_	REV__AHNAK2|p.L4929F|1|0.16|ENSG00000185567|chr14:104940664-104940664|C/A|missense_variant	35.61828744233558	0.47037581924408073	5				NaN	NaN	0	NaN	7665	4165	11829
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11833	33.652	NaN	2906.4	30	0	314.87	0.106	+			15542	GVDSSIFQNPK	11	66	596.3047978149751	1190.5950426967502	2	596.3037719726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GVDSSIFQNPK_	ENSG00000138303|ENST00000672957|ASCC1;nc|ENSG00000138303|Q8N9N2|ASCC1	104.42354056486148	0.051542069836817306	5				NaN	NaN	0	NaN	7666	4165	11829
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11834	33.654	NaN	1049.7	30	0	152.3	0.106	+			24290	LEYPLQNK	8	60	502.77368211076015	NaN	0	502.7732849121094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LEYPLQNK_	tr|U7T0H2|U7T0H2_FUSNUAsparagine--tRNAligaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=asnSPE=3SV=1	71.87747018426188	1.7418937515398478	5				NaN	NaN	0	NaN	7667	4165	11829
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11835	33.656	NaN	1176.9	30	0	86.355	0.033			+	23632	LAQKPDLI	8	45	449.2737454313883	NaN	0	449.27386474609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LAQKPDLI_	REV__ENSG00000153066|ENST00000283033|TXNDC11;REV__ENST00000572732.1_1_16:11785059-11785929:-|nuORF;REV__nc|ENSG00000153066|Q6PKC3|TXNDC11	40.5726180659479	1.7418937515398478	5				NaN	NaN	0	NaN	7668	4165	11829
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11836	33.656	NaN	1284	30	0	128.03	0.142	+			29665	PGPGWGLESLQ	11	65	570.7894897460938	NaN	0	570.7894897460938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PGPGWGLESLQ_	ENST00000375135.3_1_X:54521995-54522106:-|nuORF	29.170058357718403	0.43541742044178583	5				NaN	NaN	0	NaN	7669	4165	11829
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11848	33.684	NaN	7185.2	30	0	1958.8	0.214	+			50369	WVVAEVRRL	9	67	564.3380240360148	1126.6614951388294	2	564.3377075195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WVVAEVRRL_	ENSG00000065882|ENST00000698857|TBC1D1;nc|ENSG00000065882|Q86TI0-2|TBC1D1;nc|ENSG00000065882|Q86TI0|TBC1D1;TBC1D1|p.E431*|1|0.43|ENSG00000065882|chr4:38027862-38027863|-/T|frameshift_variant;TBC1D1|p.N498Tfs*7|1|0.48|ENSG00000065882|chr4:38044437-38044437|A/-|frameshift_variant;TBC1D1|p.V628Efs*7|1|0.41|ENSG00000065882|chr4:38049869-38049870|AG/-|frameshift_variant	29.170058357718403	0.5306379469863586	5				NaN	NaN	0	NaN	7678	4168	11847
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11849	33.687	NaN	1065.4	30	0	119.73	0.106				-1	 	0	32	341.7168746117145	681.419196290229	2	341.7161560058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7679	4168	11847
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11850	33.689	NaN	3132	30	0	472.15	0.106	+			36871	SIFSKFTSK	9	68	522.7909325487186	1043.5673121642371	2	522.7902221679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SIFSKFTSK_	ENSG00000072518|ENST00000402010|MARK2;nc|ENSG00000072518|Q7KZI7-10|MARK2;nc|ENSG00000072518|Q7KZI7-11|MARK2;nc|ENSG00000072518|Q7KZI7-12|MARK2;nc|ENSG00000072518|Q7KZI7-13|MARK2;nc|ENSG00000072518|Q7KZI7-14|MARK2;nc|ENSG00000072518|Q7KZI7-15|MARK2;nc|ENSG00000072518|Q7KZI7-16|MARK2;nc|ENSG00000072518|Q7KZI7-2|MARK2;nc|ENSG00000072518|Q7KZI7-3|MARK2;nc|ENSG00000072518|Q7KZI7-4|MARK2;nc|ENSG00000072518|Q7KZI7-5|MARK2;nc|ENSG00000072518|Q7KZI7-6|MARK2;nc|ENSG00000072518|Q7KZI7-7|MARK2;nc|ENSG00000072518|Q7KZI7-8|MARK2;nc|ENSG00000072518|Q7KZI7-9|MARK2	82.7504851949679	0.08565546331141553	5				NaN	NaN	0	NaN	7680	4168	11847
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11851	33.691	NaN	1385.3	30	0	127.5	0.106				-1	CALPIYNK	8	59	489.75542576827235	NaN	0	489.75579833984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_C(Carbamidomethyl (C))ALPIYNK_	ENSG00000104660|ENST00000321250|LEPROTL1;LEPROTL1|p.Y42Lfs*17|1|0.22|ENSG00000104660|chr8:30104324-30104325|-/T|frameshift_variant;LEPROTL1|p.Y42Tfs*10|2|0.42|ENSG00000104660|chr8:30104325-30104325|T/-|frameshift_variant;nc|ENSG00000104660|O95214-2|LEPROTL1	40.5726180659479	1.7418937515398478	5				NaN	NaN	0	NaN	7681	4168	11847
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11852	33.693	NaN	1340	30	0	638.48	0.106			+	-1	SIANMVAIPL	10	31	348.8627921192636	1043.5665469579908	3	348.8616943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_SIANM(Oxidation (M))VAIPL_	REV__ENSG00000188991|ENST00000344941|SLC15A5	21.68575002086885	0.7027366847906487	5				NaN	NaN	0	NaN	7682	4168	11847
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11853	33.695	NaN	1513.5	30	0	187.81	0.035			+	48778	VTYITHIY	8	58	505.269967912071	NaN	0	505.2706604003906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTYITHIY_	REV__ENSG00000150893|ENST00000280481|FREM2	42.47446043378293	1.7418937515398478	5				NaN	NaN	0	NaN	7683	4168	11847
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11864	33.718	NaN	3314.6	30	0	275.88	0.215	+			17805	IEVENKEVL	9	65	536.7983389322686	NaN	0	536.7987060546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IEVENKEVL_	ENSG00000173193|ENST00000474629|PARP14;nc|ENSG00000173193|Q460N5-1|PARP14;nc|ENSG00000173193|Q460N5-3|PARP14;nc|ENSG00000173193|Q460N5-4|PARP14;PARP14|p.N1416Efs*19|1|0.2|ENSG00000173193|chr3:122718388-122718389|-/A|frameshift_variant	104.42354056486148	0.014733134862207843	5				NaN	NaN	0	NaN	7691	4171	11863
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11865	33.722	NaN	4635.2	30	0	1604	0.106	+			51001	YIVFLLGFG	9	68	514.7952086524738	1027.5758643717475	2	514.794189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YIVFLLGFG_	ENSG00000167723|ENST00000576742|TRPV3;nc|ENSG00000167723|Q8NET8-2|TRPV3;nc|ENSG00000167723|Q8NET8-3|TRPV3	29.841539824830324	0.5243625958137083	5				NaN	NaN	0	NaN	7692	4171	11863
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11866	33.724	NaN	3192.5	30	0	796.22	0.106			+	32610	QYNNLLNIF	9	67	569.799228696723	1137.583904460246	2	570.2999267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QYNNLLNIF_	REV__ENSG00000111405|ENST00000422538|ENDOU;REV__nc|ENSG00000111405|P21128-2|ENDOU;REV__nc|ENSG00000111405|P21128-3|ENDOU	45.9519527083369	0.35044536499095585	5				NaN	NaN	0	NaN	7693	4171	11863
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11867	33.726	NaN	1509.1	30	0	68.904	0.037				-1	ESFDTCNFF	9	67	583.7291870117188	NaN	0	583.7291870117188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_ESFDTC(Carbamidomethyl (C))NFF_	ENST00000248975.5_1_22:32353337-32353418:+|nuORF	20.94693142431847	0.3660861156085067	5				NaN	NaN	0	NaN	7694	4171	11863
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11876	33.746	NaN	2726.8	30	0	373.21	0.214			+	7096	CVVKPNFAC	9	57	490.7388296854097	979.4631064376194	2	490.7377624511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CVVKPNFAC_	REV__ENSG00000007171|ENST00000313735|NOS2;REV__nc|ENSG00000007171|P35228-2|NOS2;REV__NOS2|p.A650Pfs*53|1|0.21|ENSG00000007171|chr17:27769063-27769063|C/-|frameshift_variant;REV__NOS2|p.Y709*|1|0.33|ENSG00000007171|chr17:27767745-27767745|G/-|frameshift_variant	40.5726180659479	0.4135428067754104	5				NaN	NaN	0	NaN	7700	4174	11875
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11877	33.75	NaN	2879.8	30	0	621.97	0.106			+	44950	TVATYIVSAI	10	60	519.2985428789369	1036.5825328246738	2	519.2971801757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVATYIVSAI_	REV__ENSG00000136834|ENST00000259357|OR1J1	40.77816245573522	0.5419747034533848	5				NaN	NaN	0	NaN	7701	4174	11875
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11878	33.751	NaN	2032.9	30	0	208.22	0.106			+	38225	SQKIKEESL	9	51	531.2972765606405	1060.580000188081	2	531.2959594726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SQKIKEESL_	REV__ENST00000540226.1_1_12:215852-215996:-|nuORF	38.753607047826485	0.4348790777924195	5				NaN	NaN	0	NaN	7702	4174	11875
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11879	33.753	NaN	1756.8	30	0	327.32	0.106	+			30003	PPITISSK	8	50	421.7525780262687	NaN	0	421.7526550292969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PPITISSK_	ENSG00000104722|ENST00000221166|NEFM;nc|ENSG00000104722|P07197-2|NEFM;NEFM|p.G845Vfs*10|1|0.22|ENSG00000104722|chr8:24918384-24918384|G/-|frameshift_variant;NEFM|p.I861Nfs*4|1|0.3|ENSG00000104722|chr8:24918430-24918431|-/A|frameshift_variant;NEFM|p.K721Rfs*18|1|0.25|ENSG00000104722|chr8:24918013-24918013|A/-|frameshift_variant;NEFM|p.K843Nfs*4|1|0.11|ENSG00000104722|chr8:24918383-24918384|-/T|frameshift_variant	34.172542307311794	1.7418937515398478	5				NaN	NaN	0	NaN	7703	4174	11875
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11880	33.755	NaN	1396.7	30	0	109.91	0.106	+			44107	TPVGLIVSH	9	61	461.77173332046755	921.5289137077351	2	461.2922668457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TPVGLIVSH_	ENSG00000136718|ENST00000259239|IMP4;ENST00000460766.5_1_2:131100637-131104038:+|nuORF	64.20726635412375	0.17854274437659667	5				NaN	NaN	0	NaN	7704	4174	11875
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11881	33.757	NaN	1856.1	30	0	238.55	0.034	+			43544	THFSKIPI	8	57	471.7716411933522	NaN	0	471.7712707519531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_THFSKIPI_	ENSG00000137948|ENST00000399546|BRDT;nc|ENSG00000137948|Q58F21-2|BRDT;nc|ENSG00000137948|Q58F21-3|BRDT;nc|ENSG00000137948|Q58F21-4|BRDT;nc|ENSG00000137948|Q58F21-5|BRDT	53.351449002276354	1.7418937515398478	5				NaN	NaN	0	NaN	7705	4174	11875
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11891	33.779	NaN	18342	30	0	2226.2	0.214				-1	 	0	76	527.7648018748487	1053.5150508164973	2	527.7640380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7712	4177	11890
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11892	33.782	NaN	33626	30	0	5889.7	0.106				-1	 	0	75	494.77575459289426	987.5369562525885	2	494.7744445800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7713	4177	11890
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11893	33.784	NaN	20773	30	0	5043.5	0.106				-1	 	0	78	537.3148828681078	1072.6152128030155	2	537.3140258789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7714	4177	11890
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11894	33.786	NaN	2265.5	30	0	208.26	0.106	+			37002	SIPLKDIH	8	65	461.77173332046755	921.5289137077351	2	461.77069091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SIPLKDIH_	E2F7|p.P729Lfs*53|1|0.24|ENSG00000165891|chr12:77025937-77025937|G/-|frameshift_variant;ENSG00000165891|ENST00000322886|E2F7;nc|ENSG00000165891|Q96AV8-2|E2F7;nc|ENSG00000165891|Q96AV8-3|E2F7	49.44154591367651	0.597725784090933	5				NaN	NaN	0	NaN	7715	4177	11890
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11895	33.788	NaN	3120.6	30	0	357.23	0.106	+			6608	AYQKQPTIF	9	67	548.2956967000678	1094.5768404669354	2	548.294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AYQKQPTIF_	ENSG00000142534|ENST00000270625|RPS11;ENST00000599167.5_1_19:49999677-50000690:+|nuORF;ENST00000600027.5_1_19:49999677-50000944:+|nuORF	60.11826168202944	0.21262886028301267	5				NaN	NaN	0	NaN	7716	4177	11890
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11896	33.79	NaN	1620.7	30	0	153.1	0.106			+	50341	WVFLFFPLW	9	67	627.8394550306557	1253.6643571281113	2	628.3394165039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_WVFLFFPLW_	REV__ENST00000471105.5_1_1:201958137-201965500:+|nuORF	29.841539824830324	0.5243625958137083	5				NaN	NaN	0	NaN	7717	4177	11890
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11897	33.791	NaN	1103.4	30	0	127.33	0.037	+			46947	VKCLMRKEY	9	49	585.3128516536434	1168.6111503740867	2	585.3128662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VKCLMRKEY_	ZNF569|p.H164Y|1|0.2|ENSG00000196437|chr19:37414168-37414168|G/A|missense_variant	18.324413293986947	0.6112419832031293	5				NaN	NaN	0	NaN	7718	4177	11890
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11906	33.812	NaN	4902.8	30	0	652.41	0.214	+			45631	TYQQVQQTL	9	73	554.7861551161158	1107.5577572990314	2	554.7852783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TYQQVQQTL_	ENSG00000126254|ENST00000262633|RBM42;nc|ENSG00000126254|Q9BTD8-2|RBM42;nc|ENSG00000126254|Q9BTD8-3|RBM42;nc|ENSG00000126254|Q9BTD8-4|RBM42	96.0336014099291	0.047854655524928534	5				NaN	NaN	0	NaN	7724	4180	11905
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11907	33.815	NaN	3463.6	30	0	1266.8	0.106				-1	 	0	44	329.21884932005025	984.6347185603508	3	329.2182922363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7725	4180	11905
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11908	33.817	NaN	4730.1	30	0	631.46	0.106	+			40699	SVAVYCRE	8	58	463.7242252979278	925.4338976626556	2	463.7232971191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVAVYCRE_	tr|U7SU83|U7SU83_FUSNUPhosphatidicacidphosphatasetype2/haloperoxidasedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01054PE=4SV=1	44.116797842482775	0.6307669463330267	5				NaN	NaN	0	NaN	7726	4180	11905
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11909	33.819	NaN	3419.6	30	0	1181.6	0.106	+			18964	IVREFSQA	8	59	475.2595786363242	948.5046043394484	2	475.25848388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IVREFSQA_	ENSG00000166783|ENST00000396368|MARF1;nc|ENSG00000166783|Q9Y4F3-3|MARF1;nc|ENSG00000166783|Q9Y4F3-4|MARF1;nc|ENSG00000166783|Q9Y4F3-5|MARF1	53.351449002276354	0.5676011784961348	5				NaN	NaN	0	NaN	7727	4180	11905
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11910	33.821	NaN	3474.7	30	0	599.79	0.106	+			4793	ATNKITIIFK	10	56	383.5725842127856	NaN	0	383.5724182128906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATNKITIIFK_	ENSG00000174136|ENST00000513185|RGMB;RGMB|p.E393Gfs*29|1|0.64|ENSG00000174136|chr5:98793614-98793615|-/G|frameshift_variant	79.48907831485694	0.10197609229655238	5				NaN	NaN	0	NaN	7728	4180	11905
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11911	33.823	NaN	2013.4	30	0	569.31	0.106	+			9403	EKGDRGPL	8	45	436.23607770168934	870.4576024701787	2	436.235107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EKGDRGPL_	ENSG00000197467|ENST00000645393|COL13A1;nc|ENSG00000197467|Q5TAT6-10|COL13A1;nc|ENSG00000197467|Q5TAT6-11|COL13A1;nc|ENSG00000197467|Q5TAT6-2|COL13A1;nc|ENSG00000197467|Q5TAT6-3|COL13A1;nc|ENSG00000197467|Q5TAT6-4|COL13A1;nc|ENSG00000197467|Q5TAT6-5|COL13A1;nc|ENSG00000197467|Q5TAT6-6|COL13A1;nc|ENSG00000197467|Q5TAT6-7|COL13A1;nc|ENSG00000197467|Q5TAT6-8|COL13A1;nc|ENSG00000197467|Q5TAT6-9|COL13A1;nc|ENSG00000197467|Q5TAT6|COL13A1	26.69291269510374	0.7532304684939817	5				NaN	NaN	0	NaN	7729	4180	11905
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11912	33.824	NaN	2567.7	30	0	229.67	0.033	+			24343	LFLGLAAGP	9	61	429.7569421393865	857.4993313455731	2	429.7555236816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LFLGLAAGP_	ENST00000268251.12_1_16:8875406-8875859:+|nuORF	39.021493756699265	0.43173687394350213	5				NaN	NaN	0	NaN	7730	4180	11905
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11927	33.855	NaN	3215.2	30	0	252.11	0.214	+			38209	SQFSLPVQK	9	71	517.2882329183641	1032.561912903528	2	517.2871704101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SQFSLPVQK_	ENSG00000187790|ENST00000267430|FANCM;nc|ENSG00000187790|Q8IYD8-3|FANCM	56.43379154798735	0.2433427591689151	5				NaN	NaN	0	NaN	7742	4183	11926
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11928	33.859	NaN	3380.6	30	0	825.45	0.106	+			1286	AESKNGWTL	9	62	503.25452411455643	1004.4944952959129	2	503.252685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AESKNGWTL_	ENSG00000110048|ENST00000263847|OSBP	65.46538089061403	0.16805504838372562	5				NaN	NaN	0	NaN	7743	4183	11926
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11929	33.861	NaN	2526.1	30	0	374.27	0.106				-1	 	0	68	542.3252843327462	1082.6360157322922	2	542.323974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7744	4183	11926
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11930	33.863	NaN	2221.8	30	0	795.03	0.106			+	24465	LGFVALWHKK	10	38	400.2408889419387	1197.700837426016	3	400.2399597167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LGFVALWHKK_	REV__ENSG00000116668|ENST00000367500|SWT1	24.519189625965996	0.6795976720565101	5				NaN	NaN	0	NaN	7745	4183	11926
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11931	33.864	NaN	2093.5	30	0	171.43	0.106	+			20803	KIDQKTPL	8	64	471.7844935541679	NaN	0	471.7845458984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KIDQKTPL_	ENSG00000162927|ENST00000316752|PUS10	49.536043120802724	1.7418937515398478	5				NaN	NaN	0	NaN	7746	4183	11926
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11932	33.866	NaN	4085	30	0	397.28	0.034			+	7588	DIPTDGILK	9	64	486.2746356775668	970.5347184219336	2	486.2710876464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DIPTDGILK_	REV__ENSG00000143171|ENST00000359842|RXRG;REV__ENSG00000186350|ENST00000481739|RXRA;REV__ENSG00000204231|ENST00000374680|RXRB;REV__ENST00000483821.1_1_6:33162461-33163032:-|nuORF;REV__nc|ENSG00000186350|P19793-2|RXRA;REV__nc|ENSG00000204231|P28702-3|RXRB	51.33545320467046	0.2872990594074956	5				NaN	NaN	0	NaN	7747	4183	11926
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11933	33.867	NaN	1208.8	30	0	115.19	0.138				-1	 	0	40	402.7590852779233	803.5036176226466	2	402.7577819824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7748	4183	11926
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11946	33.896	NaN	29481	30	0	5177	0.214				-1	 	0	68	450.7514027203235	899.488252507447	2	450.7502136230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7758	4186	11945
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11947	33.899	NaN	7192.9	30	0	1286.9	0.106				-1	 	0	71	508.31955106198967	1014.6245491907794	2	508.318603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7759	4186	11945
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11948	33.901	NaN	9721	30	0	2389.4	0.106				-1	 	0	68	500.2674655481953	998.5203781631906	2	500.266357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7760	4186	11945
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11949	33.903	NaN	6347.6	30	0	778.44	0.106				-1	 	0	72	525.7832360740637	1049.5519192149272	2	525.7830810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7761	4186	11945
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11950	33.905	NaN	7122.1	30	0	918.4	0.106	+			34794	RYLEGTSCI	9	74	521.25606592218	1040.49757891116	2	521.2554321289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RYLEGTSCI_	ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1;ENSG00000261150|ENST00000615648|EPPK1	85.16082228582465	0.07850854922700509	5				NaN	NaN	0	NaN	7762	4186	11945
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11951	33.907	NaN	4574.2	30	0	627.56	0.106	+			12505	GEEKLIASV	9	65	473.2672628096137	944.5199726860275	2	473.2656555175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GEEKLIASV_	ENSG00000130713|ENST00000372358|EXOSC2;ENST00000430138.6_1_9:133569178-133570981:+|nuORF;ENST00000463488.1_1_9:133569202-133574940:+|nuORF;ENST00000491115.6_1_9:133569178-133574746:+|nuORF;nc|ENSG00000130713|Q13868-2|EXOSC2;nc|ENSG00000130713|Q13868-3|EXOSC2	112.41091882917199	0.026537921851008135	5				NaN	NaN	0	NaN	7763	4186	11945
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11952	33.909	NaN	2242	30	0	187.03	0.035	+			15624	GVLAWVKEK	9	59	515.3090360391705	1028.6035191451408	2	515.3078002929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GVLAWVKEK_	ENSG00000008517|ENST00000525643|IL32;nc|ENSG00000008517|P24001-3|IL32;nc|ENSG00000008517|P24001-5|IL32;nc|ENSG00000008517|P24001-6|IL32;nc|ENSG00000008517|P24001-7|IL32;nc|ENSG00000008517|P24001|IL32	39.252832667884924	0.4290233611298554	5				NaN	NaN	0	NaN	7764	4186	11945
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11963	33.934	NaN	7749.5	30	0	672.29	0.214	+			39653	STIEYVIQR	9	71	554.8040391246965	1107.5935253161929	2	554.8038940429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STIEYVIQR_	ENSG00000101310|ENST00000650089|SEC23B	176.08678752253132	0.0017279326439731339	5				NaN	NaN	0	NaN	7772	4189	11962
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11964	33.937	NaN	3215.2	30	0	273.79	0.106	+			485	AAYDSLVVGK	10	61	511.77947641408156	NaN	0	511.7795715332031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAYDSLVVGK_	ENSG00000128283|ENST00000249014|CDC42EP1;nc|ENSG00000128283|Q00587-2|CDC42EP1	45.02220120713402	0.3370728479115332	5				NaN	NaN	0	NaN	7773	4189	11962
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11965	33.939	NaN	995.96	30	0	98.273	0.038	+			20558	KFRCAGCAKGF	11	55	594.2920726265157	NaN	0	594.291015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KFRCAGCAKGF_	ENSG00000131061|ENST00000375200|ZNF341;ENST00000493497.1_1_20:32376535-32379320:+|nuORF;nc|ENSG00000131061|Q9BYN7-2|ZNF341	31.529811441608018	0.4249010005043958	5				NaN	NaN	0	NaN	7774	4189	11962
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11977	33.965	NaN	4236.4	30	0	784.15	0.214	+			47064	VLGVIWGV	8	56	421.75900982212494	841.5034667110499	2	421.75775146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VLGVIWGV_	ENSG00000101084|ENST00000344795|RAB5IF;ENST00000491113.1_1_20:35234354-35236222:+|nuORF;nc|ENSG00000101084|Q9BUV8-3|RAB5IF;nc|ENSG00000101084|Q9BUV8-4|RAB5IF;nc|ENSG00000101084|Q9BUV8-5|RAB5IF;nc|ENSG00000101084|Q9BUV8|RAB5IF;nc|ENSG00000118707|Q9GZN2-2|TGIF2	54.89457262308372	0.5523244765420926	5				NaN	NaN	0	NaN	7783	4192	11976
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11978	33.969	NaN	3260.4	30	0	253.61	0.106	+			828	AEGEIYTKL	9	67	512.2727511981587	1022.5309494631175	2	512.271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEGEIYTKL_	ENSG00000138190|ENST00000260762|EXOC6;EXOC6|p.L640Ffs*39|1|0.37|ENSG00000138190|chr10:92974192-92974193|-/T|frameshift_variant;nc|ENSG00000138190|Q8TAG9-2|EXOC6	77.31757898189308	0.1091473830098891	5				NaN	NaN	0	NaN	7784	4192	11976
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11979	33.971	NaN	1987.4	30	0	380.86	0.106			+	33346	RHFVAIHK	8	38	336.53485844037834	1006.5827459213351	3	336.53411865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RHFVAIHK_	REV__ENSG00000164172|ENST00000396954|MOCS2;REV__ENST00000502402.5_1_5:52397160-52403022:-|nuORF;REV__ENST00000508922.5_3_5:52394525-52403022:-|nuORF;REV__ENST00000510818.6_2_5:52396298-52403022:-|nuORF	19.359975847455235	0.7988239741663654	5				NaN	NaN	0	NaN	7785	4192	11976
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11980	33.973	NaN	2836.3	30	0	318.49	0.106			+	7589	DIPTDGILK	9	67	486.2746356775668	970.5347184219336	2	486.2735290527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DIPTDGILK_	REV__ENSG00000143171|ENST00000359842|RXRG;REV__ENSG00000186350|ENST00000481739|RXRA;REV__ENSG00000204231|ENST00000374680|RXRB;REV__ENST00000483821.1_1_6:33162461-33163032:-|nuORF;REV__nc|ENSG00000186350|P19793-2|RXRA;REV__nc|ENSG00000204231|P28702-3|RXRB	66.42927471994793	0.16001998865088202	5				NaN	NaN	0	NaN	7786	4192	11976
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11981	33.974	NaN	1682	30	0	147.27	0.106			+	25728	LRRSPYAP	8	58	480.27515866437665	958.5357643955533	2	480.2737121582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LRRSPYAP_	REV__ARL11|p.Q67Rfs*41|1|0.24|ENSG00000152213|chr13:49630640-49630640|G/-|frameshift_variant	39.021493756699265	0.6623843612266921	5				NaN	NaN	0	NaN	7787	4192	11976
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11982	33.976	NaN	1722.8	30	0	142.14	0.106	+			42070	SYASLQQNKW	10	64	612.8050754094226	1223.595597885645	2	612.8045043945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SYASLQQNKW_	ENSG00000104133|ENST00000261866|SPG11;nc|ENSG00000104133|Q96JI7-2|SPG11;nc|ENSG00000104133|Q96JI7-3|SPG11;SPG11|p.L950Wfs*13|2|0.21|ENSG00000104133|chr15:44615552-44615552|A/-|frameshift_variant	80.45461616416974	0.1919067876629769	5				NaN	NaN	0	NaN	7788	4192	11976
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11983	33.978	NaN	1140.9	30	0	110.54	0.034			+	-1	VSVGVIACL	9	41	459.2606449271279	916.5067369210558	2	459.26007080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_VSVGVIAC(Carbamidomethyl (C))L_	REV__CLDN18|p.A134V|1|0.17|ENSG00000066405|chr3:138024622-138024622|C/T|missense_variant	33.51558372728122	0.4900267029546261	5				NaN	NaN	0	NaN	7789	4192	11976
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11988	33.992	NaN	18319	30	0	3021.3	0.214				-1	 	0	80	501.285806802761	1000.557060672322	2	501.284912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7791	4195	11987
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11989	33.996	NaN	12861	30	0	2031	0.106				-1	 	0	77	517.8350620607811	1033.655571188362	2	517.8341674804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7792	4195	11987
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11990	33.998	NaN	10418	30	0	1909.7	0.106				-1	ACPLMPKAK	9	76	508.2754318525123	1014.5363107718247	2	508.2744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_AC(Carbamidomethyl (C))PLMPKAK_	ENST00000397863.5_1_18:74726690-74726957:-|nuORF	37.15910966729921	0.4535818937225704	5				NaN	NaN	0	NaN	7793	4195	11987
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11991	34	NaN	4023.3	30	0	1044.8	0.106				-1	 	0	64	443.2749120905977	884.5352712479954	2	443.2735290527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7794	4195	11987
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11992	34.001	NaN	5381.8	30	0	1040.3	0.106	+			33145	RESGTLLELK	10	62	573.33099674762	1144.64744056204	2	573.8314819335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RESGTLLELK_	ENST00000559390.5_1_15:45021236-45021584:+|nuORF;ENST00000561237.1_1_15:45021341-45023561:+|nuORF	98.58198989935565	0.0819402597096128	5				NaN	NaN	0	NaN	7795	4195	11987
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11993	34.003	NaN	1424.9	30	0	136.96	0.106	+			15282	GTVAFALTK	9	48	454.2666609914941	906.5187690497883	2	454.2657165527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTVAFALTK_	ENSG00000127080|ENST00000287996|IPPK	52.936696900407355	0.27249468807391813	5				NaN	NaN	0	NaN	7796	4195	11987
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	11994	34.005	NaN	1458.1	30	0	121.46	0.033				-1	 	0	54	428.7615759547607	855.5085989763214	2	428.7604675292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7797	4195	11987
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12007	34.033	NaN	18597	30	0	5442.3	0.214	+			25381	LPHRGPALLGP	11	77	564.3380240360148	1126.6614951388294	2	564.3375244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LPHRGPALLGP_	ENST00000345506.8_1_17:40440529-40441542:+|nuORF	30.568863376406313	0.6691487505135859	5				NaN	NaN	0	NaN	7807	4198	12006
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12008	34.037	NaN	3583.9	30	0	242.56	0.106				-1	LARCALFVL	9	67	531.8096561884709	1061.6047594437416	2	531.80908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LARC(Carbamidomethyl (C))ALFVL_	ENSG00000164362|ENST00000310581|TERT;nc|ENSG00000164362|O14746-2|TERT;nc|ENSG00000164362|O14746-3|TERT;nc|ENSG00000164362|O14746-4|TERT	40.5726180659479	0.4135428067754104	5				NaN	NaN	0	NaN	7808	4198	12006
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12009	34.039	NaN	2816.3	30	0	425.68	0.106	+			36470	SEVQDRVML	9	63	538.7749462475156	1075.535339561831	2	538.7743530273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEVQDRVML_	ENSG00000119801|ENST00000261353|YPEL5	67.49366992349736	0.1516260258713357	5				NaN	NaN	0	NaN	7809	4198	12006
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12010	34.04	NaN	2085.9	30	0	191.01	0.106	+			5231	ATVAAILQH	9	49	462.26956182682125	922.5245707204425	2	462.26824951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATVAAILQH_	ENSG00000183340|ENST00000332349|JRKL;JRKL|p.D446Gfs*26|1|0.07|ENSG00000183340|chr11:96391985-96391986|-/GTTTTACT|frameshift_variant	82.24051045832904	0.08786059719216216	5				NaN	NaN	0	NaN	7810	4198	12006
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12011	34.042	NaN	1294.9	30	0	145.77	0.106	+			3049	ASFILGTGK	9	38	447.25899263573876	892.5034323382775	2	447.25787353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASFILGTGK_	CDCA2|p.N847Mfs*14|1|0.15|ENSG00000184661|chr8:25507200-25507200|A/-|frameshift_variant;ENSG00000184661|ENST00000330560|CDCA2;nc|ENSG00000184661|Q69YH5-2|CDCA2	49.536043120802724	0.308405419312776	5				NaN	NaN	0	NaN	7811	4198	12006
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12012	34.044	NaN	1158.4	30	0	158.58	0.106			+	23206	KYESKIQEPEK	11	46	689.8601313244147	NaN	0	689.8612670898438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KYESKIQEPEK_	REV__ENSG00000106772|ENST00000376718|PRUNE2;REV__nc|ENSG00000106772|Q8WUY3-2|PRUNE2;REV__nc|ENSG00000106772|Q8WUY3-3|PRUNE2;REV__nc|ENSG00000106772|Q8WUY3-4|PRUNE2;REV__PRUNE2|p.L2591Qfs*12|1|0.19|ENSG00000106772|chr9:76703839-76703842|CTAA/-|frameshift_variant	15.333111300571575	0.456735970842152	5				NaN	NaN	0	NaN	7812	4198	12006
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12013	34.046	NaN	1364.8	30	0	119.42	0.036	+			2022	AKNHLSRAHG	10	63	545.7986450195312	NaN	0	545.7986450195312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AKNHLSRAHG_	ENSG00000062524|ENST00000263800|LTK;ENST00000563518.5_1_15:41799676-41805922:-|nuORF;LTK|p.D681Tfs*76|1|0.2|ENSG00000062524|chr15:41504852-41504852|C/-|frameshift_variant;nc|ENSG00000062524|P29376-2|LTK;nc|ENSG00000062524|P29376-3|LTK;nc|ENSG00000062524|P29376-4|LTK;nc|ENSG00000062524|P29376-5|LTK	64.20726635412375	0.1999210135493042	5				NaN	NaN	0	NaN	7813	4198	12006
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12024	34.069	NaN	2220.1	30	0	356.07	0.214			+	46493	VETVLGLIQ	9	57	486.2932888295027	970.5720247258055	2	486.2919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VETVLGLIQ_	REV__ENSG00000157600|ENST00000372068|TMEM164;REV__nc|ENSG00000157600|Q5U3C3-2|TMEM164	82.24051045832904	0.08786059719216216	5				NaN	NaN	0	NaN	7821	4201	12023
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12025	34.073	NaN	1731.8	30	0	343.78	0.034	+			46474	VETGHLAAF	9	58	472.746060403626	943.477567874052	2	473.2457580566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VETGHLAAF_	ENSG00000148843|ENST00000369797|PDCD11	38.80614096846853	0.43426287593479557	5				NaN	NaN	0	NaN	7822	4201	12023
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12038	34.1	NaN	3173	30	0	311.53	0.214			+	17543	IDSQLLNVL	9	63	507.7959777836544	1013.5774026341088	2	507.79541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IDSQLLNVL_	REV__ENSG00000198646|ENST00000359003|NCOA6;REV__NCOA6|p.P1168Tfs*41|1|0.1|ENSG00000198646|chr20:34742754-34742755|-/T|frameshift_variant	42.86426827375447	0.38666266728046506	5				NaN	NaN	0	NaN	7832	4204	12037
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12039	34.104	NaN	3393.3	30	0	470.71	0.106	+			42877	TEGYQPPPV	9	61	494.243675518825	986.47279810445	2	494.242431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEGYQPPPV_	ENSG00000108639|ENST00000225777|SYNGR2;ENST00000592456.1_1_17:76167504-76168014:+|nuORF	60.11826168202944	0.21262886028301267	5				NaN	NaN	0	NaN	7833	4204	12037
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12040	34.106	NaN	2727.1	30	0	526.88	0.106			+	45075	TVIASALQL	9	53	458.2800503786593	914.5455478241187	2	458.27874755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVIASALQL_	REV__ENSG00000143552|ENST00000368559|NUP210L;REV__nc|ENSG00000143552|Q5VU65-2|NUP210L;REV__NUP210L|p.F1858Lfs*11|1|0.38|ENSG00000143552|chr1:153992928-153992928|A/-|frameshift_variant	45.97224482568171	0.3502073465782774	5				NaN	NaN	0	NaN	7834	4204	12037
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12041	34.108	NaN	2265.6	30	0	157.68	0.106			+	7697	DLLQRTMLN	9	68	552.2988388954152	1102.5831248576303	2	552.2984008789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DLLQRTMLN_	REV__ENSG00000254550|ENST00000529803|OMP	33.03940026070387	0.4944768905200929	5				NaN	NaN	0	NaN	7835	4204	12037
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12042	34.11	NaN	1970.9	30	0	275.22	0.106				-1	IDSAYLAMDT	10	57	558.249642205272	1114.484731477344	2	558.2499389648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_IDSAYLAM(Oxidation (M))DT_	ENSG00000115216|ENST00000379852|NRBP1	27.882242232435846	0.6521336255503853	5				NaN	NaN	0	NaN	7836	4204	12037
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12043	34.111	NaN	867.72	30	0	82.235	0.106			+	-1	FHYEVRMVRD	10	51	684.3273315429688	NaN	0	684.3273315429688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_FHYEVRM(Oxidation (M))VRD_	REV__ENSG00000072274|ENST00000360110|TFRC	37.81151784470057	0.3760215235790741	5				NaN	NaN	0	NaN	7837	4204	12037
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12044	34.113	NaN	1914.5	30	0	151.79	0.034				-1	 	0	52	461.2565695839265	920.498586234653	2	462.2689208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7838	4204	12037
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12054	34.135	NaN	14074	30	0	3444.2	0.214				-1	 	0	59	461.2565695839265	920.498586234653	2	461.25543212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7845	4207	12053
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12055	34.139	NaN	1312.9	30	0	191.88	0.106				-1	 	0	36	341.71653602373715	681.4185191142743	2	341.7157897949219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7846	4207	12053
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12056	34.141	NaN	2099.7	30	0	245.6	0.106	+			1366	AEVGAAETTL	10	51	481.24641291267136	960.4782728921427	2	481.2453308105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEVGAAETTL_	ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF	67.49366992349736	0.29779660154124327	5				NaN	NaN	0	NaN	7847	4207	12053
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12057	34.143	NaN	2359.7	30	0	268.34	0.106			+	43814	TLPPPQFEGAL	11	64	585.3128516536434	1168.6111503740867	2	585.3131713867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TLPPPQFEGAL_	REV__nc|ENSG00000198408|O60502-2|OGA	33.921630207806714	0.6339809607503234	5				NaN	NaN	0	NaN	7848	4207	12053
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12058	34.144	NaN	2134.6	30	0	159.57	0.106	+			13288	GIYGAFLQV	9	59	484.26504706640054	966.5155411996011	2	484.2638854980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GIYGAFLQV_	tr|U7SVP5|U7SVP5_FUSNURiboflavinbiosynthesisproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01294PE=3SV=1	35.200714571348534	0.47427825964483533	5				NaN	NaN	0	NaN	7849	4207	12053
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12059	34.146	NaN	2199.3	30	0	582.62	0.038				-1	TKNEKVCTEE	10	65	619.2899313979365	1236.5653098626728	2	619.288330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_TKNEKVC(Carbamidomethyl (C))TEE_	ENST00000433644.2_2_9:98178049-98189049:-|nuORF	34.172542307311794	0.6007644933930345	5				NaN	NaN	0	NaN	7850	4207	12053
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12068	34.166	NaN	2639.8	30	0	575.56	0.214			+	33381	RHVVLRGY	8	62	500.2962785971398	998.5780042610796	2	500.2951965332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RHVVLRGY_	REV__ENST00000257915.9_1_12:51566268-51566466:-|nuORF	42.47446043378293	0.6409579893742323	5				NaN	NaN	0	NaN	7856	4210	12067
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12069	34.17	NaN	3742.1	30	0	707.5	0.106				-1	CSSGLVQALL	10	69	524.2801066226372	1046.5456603120742	2	524.2792358398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_C(Carbamidomethyl (C))SSGLVQALL_	ENSG00000092148|ENST00000399332|HECTD1;HECTD1|p.F2271Lfs*13|1|0.16|ENSG00000092148|chr14:31107059-31107059|A/-|frameshift_variant;HECTD1|p.I2041Lfs*27|1|0.36|ENSG00000092148|chr14:31113133-31113133|T/-|frameshift_variant	54.776311868738084	0.41334902933431344	5				NaN	NaN	0	NaN	7857	4210	12067
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12070	34.172	NaN	1092.8	30	0	96.661	0.106	+			2265	ALVSAVILAK	10	45	328.8866199935365	NaN	0	328.88653564453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ALVSAVILAK_	sp|P08318|PP150_HCMVALargestructuralphosphoproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL32PE=1SV=1;sp|Q6SW99|PP150_HCMVMTegumentproteinpp150OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL32PE=3SV=1	51.33545320467046	0.297159550775418	5				NaN	NaN	0	NaN	7858	4210	12067
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12071	34.174	NaN	3410.7	30	0	1416.4	0.106	+			24089	LEKGLLKAL	9	60	492.8259725182907	NaN	0	492.82586669921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LEKGLLKAL_	ENSG00000213719|ENST00000375784|CLIC1	47.657333605630114	0.2228375344433429	5				NaN	NaN	0	NaN	7859	4210	12067
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12072	34.175	NaN	1994.7	30	0	148.35	0.106	+			45889	VAPGSVQCL	9	50	465.7399478320565	929.465342730913	2	465.7388916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_VAPGSVQC(Carbamidomethyl (C))L_	ENSG00000198752|ENST00000361246|CDC42BPB	52.936696900407355	0.27249468807391813	5				NaN	NaN	0	NaN	7860	4210	12067
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12073	34.177	NaN	1292.4	30	0	135.84	0.106	+			29794	PISDHVLTM	9	59	506.7612210385104	1011.5078891438209	2	506.75982666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PISDHVLTM_	ENSG00000182732|ENST00000553525|RGS6;ENST00000553690.5_1_14:72924992-72931412:+|nuORF;nc|ENSG00000182732|P49758-10|RGS6;nc|ENSG00000182732|P49758-11|RGS6;nc|ENSG00000182732|P49758-13|RGS6;nc|ENSG00000182732|P49758-14|RGS6;nc|ENSG00000182732|P49758-15|RGS6;nc|ENSG00000182732|P49758-16|RGS6;nc|ENSG00000182732|P49758-2|RGS6;nc|ENSG00000182732|P49758-5|RGS6;nc|ENSG00000182732|P49758-6|RGS6;nc|ENSG00000182732|P49758-7|RGS6;nc|ENSG00000182732|P49758-8|RGS6;nc|ENSG00000182732|P49758-9|RGS6;nc|ENSG00000182732|P49758|RGS6	73.97473282117947	0.12360187025703594	5				NaN	NaN	0	NaN	7861	4210	12067
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12074	34.179	NaN	1511	30	0	107.46	0.035			+	24301	LFDGFKFR	8	58	515.2802357859574	1028.5459186387147	2	515.2798461914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LFDGFKFR_	REV__tr|U7SSY8|U7SSY8_FUSNULipidAbiosynthesislauroylacyltransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01421PE=4SV=1	76.7741389293348	0.3504530765139327	5				NaN	NaN	0	NaN	7862	4210	12067
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12085	34.203	NaN	7019.8	30	0	3352.4	0.214	+			2269	ALWGARSPK	9	60	493.2830931219687	984.5516333107374	2	493.28173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ALWGARSPK_	ENSG00000156858|ENST00000300835|PRR14;ENST00000563211.5_1_16:30662924-30663662:+|nuORF;ENST00000565410.5_1_16:30662432-30664164:+|nuORF;PRR14|p.A167Lfs*21|1|0.41|ENSG00000156858|chr16:30653092-30653092|C/-|frameshift_variant;PRR14|p.M280Nfs*19|2|0.34|ENSG00000156858|chr16:30654799-30654800|-/C|frameshift_variant;PRR14|p.N318Kfs*8|1|0.15|ENSG00000156858|chr16:30654921-30654922|-/A|frameshift_variant;PRR14|p.P279Qfs*2|2|0.35|ENSG00000156858|chr16:30654800-30654800|C/-|frameshift_variant	58.78195531508484	0.22376836668196862	5				NaN	NaN	0	NaN	7870	4213	12084
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12086	34.206	NaN	5400.1	30	0	376.61	0.106			+	40888	SVFLFILII	9	79	532.840700356935	1063.66684778067	2	532.8399047851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVFLFILII_	REV__tr|U7SFT6|U7SFT6_FUSNUMORNrepeatproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02228PE=4SV=1	26.69291269510374	0.5537881896960711	5				NaN	NaN	0	NaN	7871	4213	12084
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12087	34.208	NaN	5640.2	30	0	1850.3	0.106			+	-1	IYIIKKKTM	9	52	385.23827984209834	1152.693010126495	3	385.2377014160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_IYIIKKKTM(Oxidation (M))_	REV__tr|U7ST45|U7ST45_FUSNUOrganicsolventtolerance-likeN-terminaldomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01283PE=4SV=1	26.69291269510374	0.5537881896960711	5				NaN	NaN	0	NaN	7872	4213	12084
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12088	34.21	NaN	1965.9	30	0	403.44	0.106	+			49760	VYPSSLSKI	9	52	497.2855866896325	992.556620446065	2	497.2839050292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VYPSSLSKI_	ENSG00000111530|ENST00000545606|CAND1;nc|ENSG00000111530|Q86VP6-2|CAND1	37.81151784470057	0.4459294069877048	5				NaN	NaN	0	NaN	7873	4213	12084
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12089	34.212	NaN	2649.1	30	0	646.96	0.106	+			2390	ANSIKFSVWVS	11	70	619.3315235754985	1236.648494217797	2	619.3294067382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ANSIKFSVWVS_	ENSG00000138182|ENST00000371728|KIF20B;KIF20B|p.F444Lfs*9|1|0.09|ENSG00000138182|chr10:89718764-89718764|T/-|frameshift_variant;KIF20B|p.K592Rfs*4|1|0.37|ENSG00000138182|chr10:89724010-89724010|A/-|frameshift_variant;KIF20B|p.N1214Tfs*5|1|0.15|ENSG00000138182|chr10:89738478-89738478|A/-|frameshift_variant;KIF20B|p.N445*|1|0.1|ENSG00000138182|chr10:89718763-89718764|-/T|frameshift_variant;KIF20B|p.R1552Gfs*9|1|0.39|ENSG00000138182|chr10:89758852-89758852|A/-|frameshift_variant;nc|ENSG00000138182|Q96Q89-2|KIF20B;nc|ENSG00000138182|Q96Q89-3|KIF20B;nc|ENSG00000138182|Q96Q89-4|KIF20B	32.75053402867276	0.6462648045997152	5				NaN	NaN	0	NaN	7874	4213	12084
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12090	34.214	NaN	1396.3	30	0	142.14	0.106			+	10268	ETLQLSCL	8	43	453.73197575547096	NaN	0	453.7325439453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ETLQLSCL_	REV__ENSG00000198963|ENST00000376896|RORB;REV__nc|ENSG00000198963|Q92753|RORB	39.252832667884924	1.7418937515398478	5				NaN	NaN	0	NaN	7875	4213	12084
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12091	34.215	NaN	1584.3	30	0	295.08	0.034	+			31070	QFAVALVIV	9	51	480.2974255881288	NaN	0	480.2976989746094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QFAVALVIV_	CELSR1|p.I2343V|1|0.08|ENSG00000075275|chr22:46381907-46381907|T/C|missense_variant	30.503639358989545	0.3235605894931338	5				NaN	NaN	0	NaN	7876	4213	12084
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12098	34.232	NaN	2566.7	30	0	230.4	0.214	+			41143	SVIVQPFSK	9	59	502.793156830189	1003.571760727178	2	502.7925109863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVIVQPFSK_	ENSG00000137871|ENST00000267807|ZNF280D;nc|ENSG00000285253|Q6N043-2|ZNF280D;nc|ENSG00000285253|Q6N043-3|ZNF280D;nc|ENSG00000285253|Q6N043-6|ZNF280D	53.08895987439943	0.27122541748218487	5				NaN	NaN	0	NaN	7880	4216	12097
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12099	34.235	NaN	2709	30	0	365.31	0.106	+			7887	DRQQLPAFL	9	69	544.2997085984576	1086.5848642637152	2	544.2985229492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DRQQLPAFL_	ENSG00000105523|ENST00000263266|FAM83E;FAM83E|p.Q297Pfs*33|1|0.38|ENSG00000105523|chr19:48603780-48603781|-/G|frameshift_variant;FAM83E|p.Q297Rfs*6|1|0.48|ENSG00000105523|chr19:48603781-48603781|G/-|frameshift_variant	51.33545320467046	0.2872990594074956	5				NaN	NaN	0	NaN	7881	4216	12097
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12100	34.237	NaN	1718.8	30	0	85.019	0.106				-1	RGMDFSIIQ	9	64	541.7678261045963	1081.5210992759926	2	541.7684936523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_RGM(Oxidation (M))DFSIIQ_	ENSG00000183346|ENST00000648843|CABCOCO1	35.15202426646627	0.4747332964206883	5				NaN	NaN	0	NaN	7882	4216	12097
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12101	34.239	NaN	1536.2	30	0	154.73	0.033				-1	 	0	50	450.7514027203235	899.488252507447	2	450.7501220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7883	4216	12097
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12111	34.261	NaN	4613.5	30	0	439.61	0.214			+	48140	VSVTFKELK	9	67	525.8142970446874	1049.6140411561746	2	525.8132934570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSVTFKELK_	REV__CON__Q0V8M9;REV__ENSG00000162267|ENST00000449956|ITIH3;REV__nc|ENSG00000162267|Q06033-2|ITIH3	45.02220120713402	0.3613509778819777	5				NaN	NaN	0	NaN	7890	4219	12110
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12112	34.265	NaN	2042.8	30	0	432.75	0.106			+	10211	ETGGTLAGKAI	11	59	509.28361127518986	1016.5526696171797	2	509.28253173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ETGGTLAGKAI_	REV__ENSG00000135525|ENST00000354570|MAP7;REV__nc|ENSG00000135525|Q14244-2|MAP7;REV__nc|ENSG00000135525|Q14244-3|MAP7;REV__nc|ENSG00000135525|Q14244-4|MAP7;REV__nc|ENSG00000135525|Q14244-5|MAP7;REV__nc|ENSG00000135525|Q14244-6|MAP7;REV__nc|ENSG00000135525|Q14244-7|MAP7	47.95952297671804	0.44903247279694136	5				NaN	NaN	0	NaN	7891	4219	12110
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12113	34.267	NaN	1653.3	30	0	172.52	0.106	+			19040	IYGFQFKA	8	58	487.26007229242373	972.5055916516475	2	487.2586975097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IYGFQFKA_	ART3|p.A238Lfs*10|1|0.23|ENSG00000156219|chr4:76082462-76082462|G/-|frameshift_variant;ENSG00000156219|ENST00000355810|ART3;ENST00000513494.5_1_4:76997042-77020397:+|nuORF;nc|ENSG00000156219|Q13508-2|ART3;nc|ENSG00000156219|Q13508-3|ART3	71.37791200682192	0.3954169775488141	5				NaN	NaN	0	NaN	7892	4219	12110
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12114	34.268	NaN	1866.9	30	0	209.67	0.035			+	36966	SIMDYKRE	8	66	521.25606592218	1040.49757891116	2	521.2544555664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SIMDYKRE_	REV__RIT2|p.K198Qfs*60|1|0.4|ENSG00000152214|chr18:42743555-42743559|TTCTC/-|frameshift_variant	47.657333605630114	0.6087971902037268	5				NaN	NaN	0	NaN	7893	4219	12110
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12122	34.287	NaN	8158.5	30	0	1483.6	0.215				-1	 	0	61	495.78563990939097	989.556726885582	2	495.78460693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7898	4222	12121
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12123	34.29	NaN	5625.2	30	0	738.35	0.106	+			39654	STIEYVIQR	9	65	554.8040391246965	1107.5935253161929	2	554.8038330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STIEYVIQR_	ENSG00000101310|ENST00000650089|SEC23B	136.26810882979174	0.012230845423532208	5				NaN	NaN	0	NaN	7899	4222	12121
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12124	34.292	NaN	6188.5	30	0	955.33	0.106	+			24107	LEKLGVTV	8	67	429.769123090761	857.523693248322	2	429.7680969238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LEKLGVTV_	ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2	93.1432384553994	0.2679547234115296	5				NaN	NaN	0	NaN	7900	4222	12121
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12125	34.294	NaN	2453.4	30	0	233.33	0.106	+			28748	NPADSISHVAY	11	66	587.2801448920238	NaN	0	587.2806396484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NPADSISHVAY_	ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;TRRAP-ASNS|1|fusion;TRRAP-ASNS|2|fusion;TRRAP|p.A1620Cfs*35|1|0.27|ENSG00000196367|chr7:98949499-98949500|-/G|frameshift_variant;TRRAP|p.K3443Sfs*19|1|0.28|ENSG00000196367|chr7:99004246-99004246|A/-|frameshift_variant;TRRAP|p.P1292Lfs*17|1|0.44|ENSG00000196367|chr7:98933258-98933258|C/-|frameshift_variant;TRRAP|p.P1360Afs*14|1|0.05|ENSG00000196367|chr7:98935641-98935642|-/GCAAATAA|frameshift_variant	36.446750945000026	0.40298828388271424	5				NaN	NaN	0	NaN	7901	4222	12121
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12126	34.296	NaN	2101.7	30	0	529.25	0.106	+			14901	GTLSSYIVK	9	55	484.27744197050976	966.5403310078195	2	484.2761535644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTLSSYIVK_	ENSG00000082068|ENST00000265107|WDR70	30.317721548370564	0.5199124245378496	5				NaN	NaN	0	NaN	7902	4222	12121
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12127	34.298	NaN	1532.2	30	0	170.96	0.106	+			8657	EDRRPTLGPG	10	60	549.2881663997052	1096.5617798662104	2	549.7887573242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EDRRPTLGPG_	ENST00000313807.4_1_15:44829006-44829054:-|nuORF	32.81241826257853	0.6118718159329168	5				NaN	NaN	0	NaN	7903	4222	12121
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12128	34.299	NaN	1226.4	30	0	186.38	0.032				-1	 	0	39	402.75895043392364	803.5033479346473	2	402.75823974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7904	4222	12121
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12139	34.325	NaN	6066.8	30	0	888.66	0.214			+	25633	LQRAEEEEE	9	72	566.7593477624999	1131.5041425917998	2	566.7586669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LQRAEEEEE_	REV__ENSG00000177045|ENST00000317578|SIX5;REV__SIX5|p.G712Vfs*14|2|0.39|ENSG00000177045|chr19:45765586-45765586|C/-|frameshift_variant;REV__SIX5|p.H691Tfs*4|1|0.42|ENSG00000177045|chr19:45765650-45765650|G/-|frameshift_variant	54.776311868738084	0.25715957988447635	5				NaN	NaN	0	NaN	7912	4225	12138
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12140	34.328	NaN	3055.8	30	0	460.34	0.106				-1	 	0	58	519.2679908828562	518.2607144162562	1	519.26708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7913	4225	12138
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12141	34.33	NaN	1602.6	30	0	375.05	0.106				-1	 	0	27	336.53485844037834	1006.5827459213351	3	336.5342102050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7914	4225	12138
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12142	34.332	NaN	2762.1	30	0	231.05	0.106				-1	 	0	69	525.7832360740637	1049.5519192149272	2	525.78369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7915	4225	12138
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12143	34.334	NaN	1757	30	0	160.64	0.106	+			49770	VYQHGLTGF	9	62	511.2594583986709	1020.5043638641419	2	511.25927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VYQHGLTGF_	ENSG00000030110|ENST00000374467|BAK1	32.81241826257853	0.4965981579233955	5				NaN	NaN	0	NaN	7916	4225	12138
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12144	34.336	NaN	1102.3	30	0	78.735	0.106	+			8218	EAEISTRPCLA	11	52	595.2967529296875	NaN	0	595.2967529296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EAEISTRPCLA_	ENSG00000157077|ENST00000287727|ZFYVE9;ENST00000361625.5_1_1:52698878-52729552:+|nuORF;nc|ENSG00000157077|O95405-2|ZFYVE9;nc|ENSG00000157077|O95405-3|ZFYVE9	35.15202426646627	0.40875833226131825	5				NaN	NaN	0	NaN	7917	4225	12138
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12145	34.337	NaN	2308	30	0	257.73	0.036	+			50050	WERNQNLI	8	66	536.7812880902271	NaN	0	536.7811279296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_WERNQNLI_	ENSG00000092421|ENST00000343348|SEMA6A;nc|ENSG00000092421|Q9H2E6-2|SEMA6A;SEMA6A|p.K1013Nfs*11|1|0.19|ENSG00000092421|chr5:116446670-116446670|G/-|frameshift_variant;SEMA6A|p.K1013Qfs*15|1|0.45|ENSG00000092421|chr5:116446669-116446670|-/G|frameshift_variant;SEMA6A|p.N990Mfs*8|1|0.1|ENSG00000092421|chr5:116446737-116446738|-/GTACA|frameshift_variant;SEMA6A|p.R918Efs*23|1|0.25|ENSG00000092421|chr5:116446955-116446956|-/T|frameshift_variant;SEMA6A|p.V881Ffs*20|2|0.21|ENSG00000092421|chr5:116447069-116447069|G/-|frameshift_variant	51.33545320467046	1.7418937515398478	5				NaN	NaN	0	NaN	7918	4225	12138
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12154	34.357	NaN	4094.3	30	0	420.9	0.214				-1	 	0	62	504.2751520491205	1006.535751165041	2	504.27392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7924	4228	12153
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12155	34.361	NaN	2236.3	30	0	243.09	0.106				-1	MQKVARSRK	9	60	573.3311961753592	1144.6478394175183	2	573.3304443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))MQKVARSRK_	ENST00000490239.5_1_9:35616323-35616377:-|nuORF	39.252832667884924	0.4290233611298554	5				NaN	NaN	0	NaN	7925	4228	12153
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12156	34.363	NaN	1417.7	30	0	260.17	0.033				-1	 	0	53	436.26730086961373	870.5200488060275	2	436.26593017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7926	4228	12153
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12164	34.381	NaN	10253	30	0	3182.8	0.214	+			25382	LPHRGPALLGP	11	61	564.3380240360148	1126.6614951388294	2	564.337646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LPHRGPALLGP_	ENST00000345506.8_1_17:40440529-40441542:+|nuORF	25.125986553469783	0.7262400895305658	5				NaN	NaN	0	NaN	7931	4231	12163
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12165	34.385	NaN	1328	30	0	167.66	0.106				-1	 	0	44	350.72198580834225	699.4294186834845	2	350.7213439941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7932	4231	12163
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12166	34.387	NaN	1983	30	0	84.73	0.106			+	32828	RCGVVFLIVG	10	65	531.8096561884709	1061.6047594437416	2	531.8084716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RCGVVFLIVG_	REV__ENSG00000183134|ENST00000332539|PTGDR2	25.450171626174864	0.6719948968573018	5				NaN	NaN	0	NaN	7933	4231	12163
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12167	34.388	NaN	1398.6	30	0	145.56	0.106	+			17562	IEAALRESL	9	58	501.2851240262956	NaN	0	501.28533935546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IEAALRESL_	ENSG00000112576|ENST00000372991|CCND3;nc|ENSG00000112576|P30281-2|CCND3;nc|ENSG00000112576|P30281-3|CCND3;nc|ENSG00000112576|P30281-4|CCND3	54.722347961057174	0.17414871455573902	5				NaN	NaN	0	NaN	7934	4231	12163
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12168	34.39	NaN	1587	30	0	243.9	0.036	+			10711	FAAQTVGNTY	10	58	536.2599034253203	1070.5052539174405	2	536.2594604492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FAAQTVGNTY_	ENSG00000144224|ENST00000272638|UBXN4	53.59686742100583	0.4240759338601513	5				NaN	NaN	0	NaN	7935	4231	12163
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12179	34.416	NaN	2331	30	0	266.81	0.214				-1	MLGLGCTVDV	10	64	512.2467564920338	1022.4789600508676	2	512.2462768554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))LGLGCTVDV_	ENSG00000145248|ENST00000273861|SLC10A4	42.396135135203025	0.5270658956260207	5				NaN	NaN	0	NaN	7943	4234	12178
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12180	34.42	NaN	2369.2	30	0	475.18	0.106	+			12184	GANSLFLEK	9	52	489.7661966469544	NaN	0	489.76593017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GANSLFLEK_	ENSG00000183864|ENST00000327492|TOB2	104.42354056486148	0.014733134862207843	5				NaN	NaN	0	NaN	7944	4234	12178
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12181	34.422	NaN	3077.2	30	0	473.42	0.106	+			44473	TSQPFQVLK	9	58	524.296196205276	1046.577839477352	2	524.2960815429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TSQPFQVLK_	ENSG00000122008|ENST00000241436|POLK;nc|ENSG00000122008|Q9UBT6-3|POLK;nc|ENSG00000122008|Q9UBT6-8|POLK	51.19269402634007	0.2889735674168909	5				NaN	NaN	0	NaN	7945	4234	12178
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12182	34.423	NaN	2010.3	30	0	108.57	0.106	+			30194	PSNLPLLLPA	10	60	517.8158884964475	NaN	0	517.835205078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PSNLPLLLPA_	ARHGEF10|p.E997Gfs*16|1|0.43|ENSG00000104728|chr8:1928644-1928644|A/-|frameshift_variant;ARHGEF10|p.P976Rfs*8|1|0.14|ENSG00000104728|chr8:1928577-1928577|C/-|frameshift_variant;ARHGEF10|p.S277Mfs*35|1|0.17|ENSG00000104728|chr8:1876646-1876646|G/-|frameshift_variant;ENSG00000104728|ENST00000349830|ARHGEF10;ENST00000522969.1_1_8:1808097-1817553:+|nuORF;nc|ENSG00000104728|O15013-4|ARHGEF10;nc|ENSG00000104728|O15013-6|ARHGEF10;nc|ENSG00000104728|O15013-7|ARHGEF10;nc|ENSG00000104728|O15013|ARHGEF10	52.936696900407355	0.28703625529470256	5				NaN	NaN	0	NaN	7946	4234	12178
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12183	34.425	NaN	1617.2	30	0	116.72	0.034	+			46356	VEKPVSSIL	9	59	486.2932888295027	970.5720247258055	2	486.2903137207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VEKPVSSIL_	ENSG00000196405|ENST00000392920|EVL;ENST00000553694.5_1_14:100603907-100610072:+|nuORF;nc|ENSG00000196405|Q9UI08-3|EVL;nc|ENSG00000196405|Q9UI08-4|EVL;nc|ENSG00000196405|Q9UI08-5|EVL;nc|ENSG00000196405|Q9UI08|EVL	56.43379154798735	0.2433427591689151	5				NaN	NaN	0	NaN	7947	4234	12178
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12192	34.445	NaN	3735.1	30	0	258.96	0.214			+	-1	LSLDDGMLQ	9	69	504.2400382893367	1006.4655236454735	2	504.2389831542969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LSLDDGM(Oxidation (M))LQ_	REV__ENSG00000091656|ENST00000651372|ZFHX4;REV__nc|ENSG00000091656|Q86UP3-2|ZFHX4;REV__ZFHX4|p.D2246*|1|0.34|ENSG00000091656|chr8:76853650-76853651|-/T|frameshift_variant;REV__ZFHX4|p.H1565Tfs*5|1|0.28|ENSG00000091656|chr8:76851613-76851613|T/-|frameshift_variant;REV__ZFHX4|p.I2143Nfs*7|1|0.31|ENSG00000091656|chr8:76853343-76853344|-/A|frameshift_variant;REV__ZFHX4|p.K1442Nfs*10|1|0.18|ENSG00000091656|chr8:76851241-76851241|A/-|frameshift_variant;REV__ZFHX4|p.K1867Nfs*7|1|0.09|ENSG00000091656|chr8:76852518-76852518|A/-|frameshift_variant;REV__ZFHX4|p.L1719Cfs*6|1|0.13|ENSG00000091656|chr8:76852073-76852073|T/-|frameshift_variant;REV__ZFHX4|p.P2056Hfs*26|1|0.19|ENSG00000091656|chr8:76853081-76853084|CCTC/-|frameshift_variant;REV__ZFHX4|p.P2056Tfs*82|1|0.25|ENSG00000091656|chr8:76853079-76853083|CTCCT/-|frameshift_variant;REV__ZFHX4|p.P2057Hfs*26|2|0.17|ENSG00000091656|chr8:76853084-76853084|C/-|frameshift_variant;REV__ZFHX4|p.Q1674Afs*4|1|0.14|ENSG00000091656|chr8:76851934-76851935|-/A|frameshift_variant;REV__ZFHX4|p.R2647Gfs*44|1|0.25|ENSG00000091656|chr8:76854854-76854854|A/-|frameshift_variant;REV__ZFHX4|p.V1343Sfs*4|1|0.08|ENSG00000091656|chr8:76850945-76850946|-/A|frameshift_variant;REV__ZFHX4|p.Y3286Ifs*70|1|0.46|ENSG00000091656|chr8:76863562-76863563|-/G|frameshift_variant	84.9155231211612	0.07920012719736333	5				NaN	NaN	0	NaN	7953	4237	12191
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12193	34.449	NaN	2573.3	30	0	819.25	0.035			+	-1	FGKTQLTMP	9	66	519.7675359636269	1037.5205189940536	2	519.7669677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_FGKTQLTM(Oxidation (M))P_	REV__ENSG00000196581|ENST00000378191|AJAP1	49.44154591367651	0.3095138337212152	5				NaN	NaN	0	NaN	7954	4237	12191
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12200	34.467	NaN	2498.3	30	0	197.23	0.214				-1	LAALIPSCH	9	66	491.26456263415287	980.5145723351058	2	491.26202392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_LAALIPSC(Carbamidomethyl (C))H_	ENST00000555222.5_1_12:57492966-57496222:-|nuORF	60.29395666154354	0.21116425950210296	5				NaN	NaN	0	NaN	7958	4240	12199
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12201	34.47	NaN	1462.4	30	0	194.67	0.106			+	-1	MVIMLTLY	8	67	500.26787864023584	998.5212043472717	2	500.2662658691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_M(Oxidation (M))VIMLTLY_	REV__ENST00000430246.6_1_14:21702260-21731069:-|nuORF	41.20836394106077	0.648814379774464	5				NaN	NaN	0	NaN	7959	4240	12199
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12202	34.472	NaN	2706.3	30	0	580.51	0.036			+	24336	LFLCIRICV	9	65	540.3078895881541	1078.6012262431082	2	540.8104858398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LFLCIRICV_	REV__ENST00000468303.5_1_1:24742648-24743062:-|nuORF	60.29395666154354	0.21116425950210296	5				NaN	NaN	0	NaN	7960	4240	12199
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12213	34.496	NaN	15537	30	0	2492.5	0.214			+	51091	YLRPAGQPM	9	72	524.7652737233753	1047.5159945135506	2	524.7647094726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_YLRPAGQPM(Oxidation (M))_	REV__ENSG00000124126|ENST00000371941|PREX1;REV__ENST00000482556.5_1_20:47242425-47249020:-|nuORF;REV__nc|ENSG00000124126|Q8TCU6-2|PREX1	55.50420428727701	0.2510918378945873	5				NaN	NaN	0	NaN	7968	4243	12212
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12214	34.5	NaN	1021.4	30	0	231.36	0.106				-1	 	0	30	343.1981510246525	342.1908745580525	1	343.1974792480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7969	4243	12212
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12215	34.502	NaN	2136.1	30	0	265.12	0.106			+	25449	LPQFVQLG	8	51	451.25897191650006	900.5033908998001	2	451.25787353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LPQFVQLG_	REV__ENST00000566733.2_1_6:3911567-3911663:-|nuORF	50.0245360154114	0.5941082100236891	5				NaN	NaN	0	NaN	7970	4243	12212
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12216	34.503	NaN	3837.9	30	0	664.42	0.106	+			15751	GVSLMTVPK	9	56	466.2682679017871	930.5219828703742	2	466.2663269042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GVSLMTVPK_	ENST00000284202.8_1_18:22006682-22007982:+|nuORF	90.60085204095205	0.06317133949006545	5				NaN	NaN	0	NaN	7971	4243	12212
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12217	34.505	NaN	1972.6	30	0	432.16	0.106			+	24337	LFLCIRICV	9	67	540.3078895881541	1078.6012262431082	2	540.30908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LFLCIRICV_	REV__ENST00000468303.5_1_1:24742648-24743062:-|nuORF	50.0245360154114	0.3026755932229825	5				NaN	NaN	0	NaN	7972	4243	12212
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12218	34.507	NaN	1862.4	30	0	255.56	0.036	+			42312	TAFENAYLK	9	65	528.7727330105794	1055.5309130879587	2	528.7720947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TAFENAYLK_	ATM|p.C1838Vfs*8|1|0.42|ENSG00000149311|chr11:108304687-108304687|T/-|frameshift_variant;ATM|p.G1642Wfs*23|1|0.78|ENSG00000149311|chr11:108297299-108297300|-/T|frameshift_variant;ATM|p.G2425Vfs*15|1|0.33|ENSG00000149311|chr11:108329204-108329204|G/-|frameshift_variant;ATM|p.I1581Sfs*20|1|0.25|ENSG00000149311|chr11:108293437-108293437|A/-|frameshift_variant;ATM|p.K1170Nfs*11|1|0.26|ENSG00000149311|chr11:108281098-108281098|A/-|frameshift_variant;ATM|p.K2303Rfs*7|2|0.24|ENSG00000149311|chr11:108326153-108326153|A/-|frameshift_variant;ATM|p.K2413Tfs*11|1|0.06|ENSG00000149311|chr11:108329168-108329169|-/CAACCAATTTAAATTAT|frameshift_variant;ATM|p.K2811Sfs*46|1|0.34|ENSG00000149311|chr11:108345750-108345750|A/-|frameshift_variant;ATM|p.L2231Wfs*4|1|0.52|ENSG00000149311|chr11:108325426-108325426|T/-|frameshift_variant;ATM|p.P1587Ffs*13|1|0.08|ENSG00000149311|chr11:108293459-108293462|ACCC/-|frameshift_variant;ATM|p.R1973Efs*17|1|0.26|ENSG00000149311|chr11:108310311-108310311|A/-|frameshift_variant;ATM|p.T1609*|1|0.23|ENSG00000149311|chr11:108294972-108294973|-/TG|frameshift_variant;ATM|p.V1446Cfs*2|1|0.25|ENSG00000149311|chr11:108289697-108289698|-/T|frameshift_variant;ENSG00000149311|ENST00000675843|ATM	36.446750945000026	0.4619375763483977	5				NaN	NaN	0	NaN	7973	4243	12212
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12219	34.508	NaN	1117.3	30	0	198.73	0.139				-1	 	0	43	461.2565695839265	920.498586234653	2	461.25543212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7974	4243	12212
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12231	34.535	NaN	10695	30	0	1852.5	0.214	+			30360	PVEKMRTMI	9	67	552.7981278072325	1103.581702681265	2	552.7973022460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PVEKMRTMI_	ZBTB24|p.D236Mfs*74|2|0.09|ENSG00000112365|chr6:109481322-109481322|T/-|frameshift_variant	79.45101966838831	0.09992237243120712	5				NaN	NaN	0	NaN	7983	4246	12230
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12232	34.539	NaN	9450.6	30	0	811.36	0.106	+			51365	YTFQQPRHQ	9	80	602.7970842491661	1203.5796155651321	2	602.7963256835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YTFQQPRHQ_	ENSG00000169193|ENST00000307471|CCDC126	58.78195531508484	0.22376836668196862	5				NaN	NaN	0	NaN	7984	4246	12230
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12233	34.541	NaN	4076.3	30	0	519.51	0.106				-1	 	0	62	471.259044602996	940.5035362727921	2	471.2579040527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	7985	4246	12230
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12234	34.543	NaN	4860.6	30	0	594.41	0.106			+	-1	LDILRSLTM	9	69	539.301641401804	1076.5887298704079	2	539.30078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_LDILRSLTM(Oxidation (M))_	REV__ENSG00000123607|ENST00000243344|TTC21B	44.116797842482775	0.37197099687881774	5				NaN	NaN	0	NaN	7986	4246	12230
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12235	34.545	NaN	2743.4	30	0	316.33	0.106	+			10584	EYISTVKTL	9	59	527.2958968815656	1052.577240829931	2	527.294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EYISTVKTL_	ENSG00000168395|ENST00000313552|ING5;ENST00000482774.5_1_2:242641480-242659534:+|nuORF;ENST00000489509.1_1_2:242641480-242659033:+|nuORF;ENST00000492488.5_1_2:242641480-242651487:+|nuORF;ING5|p.A46V|1|0.39|ENSG00000168395|chr2:241709243-241709243|C/T|missense_variant;ING5|p.G142Afs*58|1|0.38|ENSG00000168395|chr2:241712011-241712011|G/-|frameshift_variant;nc|ENSG00000168395|Q8WYH8-2|ING5	85.16082228582465	0.07850854922700509	5				NaN	NaN	0	NaN	7987	4246	12230
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12236	34.546	NaN	1985.5	30	0	145.38	0.106				-1	ADSAQAQKL	9	60	487.2512402100181	NaN	0	487.2503662109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))ADSAQAQKL_	ENSG00000099377|ENST00000297679|HSD3B7;HSD3B7|p.L182Cfs*4|1|0.23|ENSG00000099377|chr16:30986846-30986846|G/-|frameshift_variant;nc|ENSG00000099377|Q9H2F3-2|HSD3B7	39.252832667884924	0.27938773122138094	5				NaN	NaN	0	NaN	7988	4246	12230
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12237	34.548	NaN	1299.3	30	0	318.88	0.034			+	7447	DFIAQRSI	8	53	475.25744274857914	948.5003325639583	2	475.7599182128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DFIAQRSI_	REV__ENST00000478646.5_1_2:178494137-178540272:-|nuORF	42.396135135203025	0.6414440140393314	5				NaN	NaN	0	NaN	7989	4246	12230
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12249	34.574	NaN	2421.6	30	0	185.34	0.214			+	27931	MVDRYLKMQ	9	63	592.3024579660236	1182.590362998847	2	592.8035278320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MVDRYLKMQ_	REV__ZNF227|p.R45M|1|0.1|ENSG00000131115|chr19:44228519-44228519|G/T|missense_variant	47.657333605630114	0.33044192980041115	5				NaN	NaN	0	NaN	7998	4249	12248
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12250	34.577	NaN	3477.9	30	0	742.68	0.106	+			4246	ATGDMSGLLK	10	60	496.7584200694976	991.5022872057953	2	496.7571716308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATGDMSGLLK_	ENSG00000127837|ENST00000248450|AAMP;ENST00000475678.5_1_2:219131145-219134809:-|nuORF;ENST00000489767.5_1_2:219130391-219134818:-|nuORF	81.52500206392136	0.18316182710238588	5				NaN	NaN	0	NaN	7999	4249	12248
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12251	34.579	NaN	3221.6	30	0	380.95	0.106			+	-1	LGVKKNMLV	9	62	509.30935522148224	1016.6041575097645	2	509.308349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_LGVKKNM(Oxidation (M))LV_	REV__ENSG00000244623|ENST00000316368|OR2AE1	47.91560031466742	0.327412564698279	5				NaN	NaN	0	NaN	8000	4249	12248
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12252	34.581	NaN	2140.2	30	0	247.88	0.106			+	9178	EGPTGKQSI	9	53	458.74016766671434	NaN	0	458.7400207519531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EGPTGKQSI_	REV__COL4A4|p.A966T|1|0.32|ENSG00000081052|chr2:227052377-227052377|C/T|missense_variant;REV__COL4A4|p.G1230Vfs*58|2|0.28|ENSG00000081052|chr2:227032170-227032170|C/-|frameshift_variant;REV__ENSG00000081052|ENST00000396625|COL4A4	54.722347961057174	0.17414871455573902	5				NaN	NaN	0	NaN	8001	4249	12248
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12253	34.583	NaN	2683.5	30	0	304.76	0.106				-1	MTMILKAKL	9	64	532.8125612180794	NaN	0	533.2607421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_M(Oxidation (M))TMILKAKL_	ENSG00000177189|ENST00000379565|RPS6KA3;RPS6KA3|p.N713Rfs*13|1|0.08|ENSG00000177189|chrX:20155483-20155484|-/AGCACAAGTTC|frameshift_variant	40.77816245573522	0.2702456086868081	5				NaN	NaN	0	NaN	8002	4249	12248
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12254	34.585	NaN	1028.2	30	0	226.74	0.037			+	17152	HTAQHEVAHL	10	51	571.7868766670206	NaN	0	571.7876586914062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HTAQHEVAHL_	REV__ENST00000295598.9_1_1:116947075-116947252:+|nuORF	27.882242232435846	0.4086243523356342	5				NaN	NaN	0	NaN	8003	4249	12248
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12269	34.616	NaN	4689.8	30	0	594.54	0.214	+			50665	YEEELREL	8	64	540.7645218325542	NaN	0	540.7643432617188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YEEELREL_	ENSG00000175084|ENST00000373960|DES	90.60085204095205	1.7418937515398478	5				NaN	NaN	0	NaN	8015	4252	12268
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12270	34.62	NaN	2431.3	30	0	405.89	0.106	+			28462	NFRLESLA	8	58	475.25744274857914	948.5003325639583	2	475.2543640136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NFRLESLA_	ENSG00000147799|ENST00000377307|ARHGAP39;ENST00000528810.1_1_8:145769259-145771014:-|nuORF;nc|ENSG00000147799|Q9C0H5|ARHGAP39	68.78682469695295	0.41700713582915416	5				NaN	NaN	0	NaN	8016	4252	12268
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12271	34.622	NaN	1877.7	30	0	107.98	0.106	+			25776	LSALKQLLL	9	53	499.8348170084866	997.6550810837732	2	499.8334045410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSALKQLLL_	ENSG00000095564|ENST00000265990|BTAF1;nc|ENSG00000095564|O14981-2|BTAF1	37.15910966729921	0.4535818937225704	5				NaN	NaN	0	NaN	8017	4252	12268
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12272	34.623	NaN	2475.5	30	0	383.49	0.106	+			27701	MPYLKACLK	9	63	533.7930251906403	NaN	0	533.7929077148438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MPYLKACLK_	ENSG00000019186|ENST00000216862|CYP24A1;nc|ENSG00000019186|Q07973-2|CYP24A1;nc|ENSG00000019186|Q07973-3|CYP24A1	45.9519527083369	0.2345902329052062	5				NaN	NaN	0	NaN	8018	4252	12268
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12273	34.625	NaN	3138.1	30	0	316.5	0.106				-1	IDQDMACAILI	11	67	611.2974663181697	1220.5803797031392	2	611.2962646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_IDQDM(Oxidation (M))ACAILI_	ENSG00000127603|ENST00000564288|MACF1;MACF1|p.A5223Lfs*8|1|0.21|ENSG00000127603|chr1:39388486-39388486|G/-|frameshift_variant;MACF1|p.N4824Kfs*19|1|0.33|ENSG00000127603|chr1:39387292-39387293|-/A|frameshift_variant;MACF1|p.S2157Ffs*3|1|0.37|ENSG00000127603|chr1:39333036-39333037|-/T|frameshift_variant;MACF1|p.T4896Lfs*29|1|0.27|ENSG00000127603|chr1:39387507-39387507|A/-|frameshift_variant;nc|ENSG00000127603|Q9UPN3-5|MACF1;nc|ENSG00000127603|Q9UPN3|MACF1	47.95952297671804	0.44903247279694136	5				NaN	NaN	0	NaN	8019	4252	12268
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12274	34.627	NaN	1843.7	30	0	205.55	0.038			+	32179	QSSLARVVMQH	11	71	628.3310282724483	1254.6475036116965	2	628.3294677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QSSLARVVMQH_	REV__ENSG00000196684|ENST00000613986|HSH2D;REV__nc|ENSG00000196684|Q96JZ2-2|HSH2D	42.33807565288922	0.5259510355945483	5				NaN	NaN	0	NaN	8020	4252	12268
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12275	34.628	NaN	949	30	0	141.44	0.146				-1	VMLLAALWMI	10	42	392.8883972167969	NaN	0	392.8883972167969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_VM(Oxidation (M))LLAALWMI_	ENSG00000105929|ENST00000310018|ATP6V0A4	18.262085536374414	0.4201028297492154	5				NaN	NaN	0	NaN	8021	4252	12268
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12284	34.65	NaN	5687.9	30	0	900.28	0.214				-1	 	0	61	480.7636727103851	959.5127924875702	2	480.76239013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8027	4255	12283
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12285	34.653	NaN	2018.6	30	0	520.47	0.106				-1	DRCKMNPCLS	10	53	640.7778487133445	NaN	0	640.777587890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_DRC(Carbamidomethyl (C))KMNPC(Carbamidomethyl (C))LS_	VCAN|p.N3100S|1|0.24|ENSG00000038427|chr5:83545570-83545570|A/G|missense_variant	17.468008924990375	0.4201028297492154	5				NaN	NaN	0	NaN	8028	4255	12283
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12286	34.655	NaN	2167.8	30	0	550.46	0.106			+	10244	ETKIVIKVD	9	56	348.88123251282036	NaN	0	348.8812561035156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ETKIVIKVD_	REV__ENSG00000181220|ENST00000458143|ZNF746;REV__nc|ENSG00000181220|Q6NUN9-2|ZNF746;REV__nc|ENSG00000181220|Q6NUN9-3|ZNF746;REV__nc|ENSG00000181220|Q6NUN9|ZNF746	40.05817265558897	0.275207446262312	5				NaN	NaN	0	NaN	8029	4255	12283
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12287	34.657	NaN	1973.6	30	0	169.61	0.106	+			18654	ISVAITEKSGF	11	67	576.3196735032578	NaN	0	576.31982421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ISVAITEKSGF_	ENST00000450180.5_1_7:37723423-37724800:+|nuORF;ENST00000461610.5_1_7:37723426-37725096:+|nuORF	54.722347961057174	0.2814010645723107	5				NaN	NaN	0	NaN	8030	4255	12283
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12288	34.659	NaN	2582	30	0	321.09	0.106	+			29097	NTMQQFLQK	9	65	569.2905266269062	1136.5665003206122	2	569.2892456054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NTMQQFLQK_	ENSG00000071859|ENST00000393600|FAM50A	109.47833844074708	0.029530294723441826	5				NaN	NaN	0	NaN	8031	4255	12283
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12289	34.661	NaN	1775.6	30	0	429.55	0.106			+	29491	PCSVHTLAGSF	11	56	559.7674331526619	1117.5203133721236	2	559.7669677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PCSVHTLAGSF_	REV__ENST00000557379.1_1_14:20768687-20774096:-|nuORF	45.97224482568171	0.4762245054624163	5				NaN	NaN	0	NaN	8032	4255	12283
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12290	34.662	NaN	2881.9	30	0	201.36	0.036			+	11578	FPNGFSRKR	9	68	554.8040391246965	1107.5935253161929	2	555.3074340820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FPNGFSRKR_	REV__CAMKK2|p.G550Efs*7|1|0.34|ENSG00000110931|chr12:121240817-121240817|C/-|frameshift_variant;REV__ENSG00000004660|ENST00000348335|CAMKK1;REV__ENSG00000110931|ENST00000404169|CAMKK2;REV__nc|ENSG00000004660|Q8N5S9-2|CAMKK1;REV__nc|ENSG00000110931|Q96RR4-2|CAMKK2;REV__nc|ENSG00000110931|Q96RR4-3|CAMKK2;REV__nc|ENSG00000110931|Q96RR4-4|CAMKK2;REV__nc|ENSG00000110931|Q96RR4-5|CAMKK2;REV__nc|ENSG00000110931|Q96RR4-6|CAMKK2;REV__nc|ENSG00000110931|Q96RR4-7|CAMKK2	35.15202426646627	0.4747332964206883	5				NaN	NaN	0	NaN	8033	4255	12283
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12304	34.692	NaN	7749.5	30	0	2141.5	0.214			+	19232	KAAMVKFNQ	9	69	526.781149114168	1051.5477452951359	2	526.780029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_KAAM(Oxidation (M))VKFNQ_	REV__ENSG00000068724|ENST00000319190|TTC7A;REV__ENST00000409825.5_1_2:47184044-47301059:+|nuORF;REV__ENST00000491786.5_1_2:47205894-47301059:+|nuORF;REV__nc|ENSG00000068724|Q9ULT0-4|TTC7A	90.77665401227738	0.06267569666681755	5				NaN	NaN	0	NaN	8044	4258	12303
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12305	34.696	NaN	2009	30	0	231.33	0.106			+	29568	PFEKTGVNL	9	60	502.7750866207541	1003.5356203083082	2	502.77435302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PFEKTGVNL_	REV__CHRD|p.D509E|1|0.4|ENSG00000090539|chr3:184384623-184384623|C/A|missense_variant	49.536043120802724	0.308405419312776	5				NaN	NaN	0	NaN	8045	4258	12303
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12306	34.698	NaN	1583.1	30	0	130.01	0.106	+			32088	QSFEKEEKP	9	61	561.2751643143221	1120.535775695444	2	561.2742919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QSFEKEEKP_	ENSG00000048991|ENST00000683871|R3HDM1;nc|ENSG00000048991|Q15032-2|R3HDM1;nc|ENSG00000048991|Q15032-3|R3HDM1;nc|ENSG00000048991|Q15032-4|R3HDM1;nc|ENSG00000048991|Q15032|R3HDM1;R3HDM1|p.A971Lfs*26|1|0.4|ENSG00000048991|chr2:135722514-135722514|A/-|frameshift_variant	26.69291269510374	0.5537881896960711	5				NaN	NaN	0	NaN	8046	4258	12303
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12307	34.7	NaN	1365.7	30	0	146.6	0.036	+			27091	MALVRGAEPAA	11	59	543.2934411250989	1084.5723293169976	2	543.29296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MALVRGAEPAA_	ENSG00000135631|ENST00000486777|RAB11FIP5;nc|ENSG00000135631|Q9BXF6|RAB11FIP5;RAB11FIP5|p.G488Vfs*25|2|0.3|ENSG00000135631|chr2:73088155-73088155|C/-|frameshift_variant	25.57405402267927	0.7215402271931856	5				NaN	NaN	0	NaN	8047	4258	12303
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12317	34.721	NaN	6860.6	30	0	1940	0.214	+			33138	RERLIIWAA	9	63	564.3380240360148	1126.6614951388294	2	564.3373413085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RERLIIWAA_	ENSG00000128886|ENST00000319359|ELL3;ENST00000417761.2_1_15:44065316-44087594:-|nuORF;ENST00000467869.5_1_15:44065316-44068571:-|nuORF;nc|ENSG00000128886|Q9HB65-2|ELL3	37.81151784470057	0.4459294069877048	5				NaN	NaN	0	NaN	8054	4261	12316
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12318	34.725	NaN	4711.2	30	0	935.94	0.106				-1	 	0	63	492.7804097619028	983.5462665906056	2	492.7789001464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8055	4261	12316
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12319	34.727	NaN	1863.7	30	0	462.65	0.106			+	-1	ECALELDKCAE	11	62	669.289814605675	1336.56507627815	2	669.2879028320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_EC(Carbamidomethyl (C))ALELDKC(Carbamidomethyl (C))AE_	REV__BRCA2|p.E3316Rfs*11|1|0.3|ENSG00000139618|chr13:32398452-32398453|-/A|frameshift_variant;REV__BRCA2|p.K1691Nfs*15|1|0.11|ENSG00000139618|chr13:32339422-32339422|A/-|frameshift_variant;REV__BRCA2|p.N1642Mfs*2|1|0.08|ENSG00000139618|chr13:32339277-32339277|A/-|frameshift_variant;REV__BRCA2|p.N1784Tfs*7|1|0.4|ENSG00000139618|chr13:32339700-32339700|A/-|frameshift_variant;REV__BRCA2|p.T2515Nfs*24|1|0.35|ENSG00000139618|chr13:32356530-32356531|-/A|frameshift_variant;REV__BRCA2|p.T2685Hfs*9|1|0.05|ENSG00000139618|chr13:32363251-32363251|A/-|frameshift_variant;REV__ENSG00000139618|ENST00000380152|BRCA2	24.519189625965996	0.7326048944360514	5				NaN	NaN	0	NaN	8056	4261	12316
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12320	34.729	NaN	1453.3	30	0	141.01	0.106	+			13402	GLFGNLSLI	9	49	467.2738253857838	932.5330978383677	2	467.273193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GLFGNLSLI_	nc|ENSG00000293504|Q99463|NPY6R	71.29570347882199	0.13518600952103718	5				NaN	NaN	0	NaN	8057	4261	12316
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12321	34.731	NaN	1808.9	30	0	354.06	0.106				-1	 	0	43	336.53490708318884	1006.5828918497666	3	336.53424072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8058	4261	12316
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12322	34.732	NaN	2054.5	30	0	77.535	0.106				-1	SNLTPACPML	10	67	531.7501815413882	NaN	0	531.7501220703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_SNLTPACPM(Oxidation (M))L_	ENST00000338154.10_1_X:53964145-53964379:-|nuORF	54.776311868738084	0.27540594196716844	5				NaN	NaN	0	NaN	8059	4261	12316
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12323	34.734	NaN	3007.8	30	0	231.78	0.036			+	-1	SWMTRQKR	8	67	554.7877117276935	1107.5608705221869	2	554.7883911132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_SWM(Oxidation (M))TRQKR_	REV__KIF13A|p.V1116Sfs*23|1|0.39|ENSG00000137177|chr6:17787792-17787792|T/-|frameshift_variant	34.172542307311794	0.6954784234644539	5				NaN	NaN	0	NaN	8060	4261	12316
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12332	34.754	NaN	2097.2	30	0	231.35	0.214				-1	 	0	52	436.2727285729447	870.5309042126894	2	436.2713317871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8066	4264	12331
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12333	34.758	NaN	3150.3	30	0	676.12	0.106			+	10058	ESGATFVWPE	10	70	561.7577307641393	1121.5009085950785	2	561.7576293945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ESGATFVWPE_	REV__PTK7|p.R331W|1|0.19|ENSG00000112655|chr6:43132450-43132450|C/T|missense_variant	49.44154591367651	0.46214596422418036	5				NaN	NaN	0	NaN	8067	4264	12331
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12334	34.76	NaN	1442.6	30	0	248.34	0.106	+			46173	VDVRGPDWHL	10	51	597.3074083436812	1192.6002637541624	2	597.3058471679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VDVRGPDWHL_	AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK	27.882242232435846	0.6521336255503853	5				NaN	NaN	0	NaN	8068	4264	12331
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12335	34.762	NaN	1381.8	30	0	89.987	0.106	+			26514	LTPLFNPVVY	10	61	581.8276712399196	NaN	0	581.8273315429688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LTPLFNPVVY_	ENSG00000182634|ENST00000641585|OR10G7;OR10G7|p.T288I|1|0.37|ENSG00000182634|chr11:124038139-124038139|G/A|missense_variant	34.172542307311794	0.38797011891751465	5				NaN	NaN	0	NaN	8069	4264	12331
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12336	34.763	NaN	1527.8	30	0	122.37	0.036	+			12594	GEHIIAGAGEL	11	60	533.7813046672865	1065.5480564013728	2	533.78125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GEHIIAGAGEL_	ENSG00000167658|ENST00000309311|EEF2	47.95952297671804	0.44903247279694136	5				NaN	NaN	0	NaN	8070	4264	12331
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12348	34.799	NaN	3248.2	30	0	344.57	0.214			+	50368	WVTLSFTY	8	61	508.7570932085128	1015.4996334838256	2	508.7554016113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WVTLSFTY_	REV__ENSG00000008710|ENST00000262304|PKD1;REV__ENST00000343738.10_1_16:15227853-15229959:-|nuORF;REV__ENST00000532415.5_1_16:18477017-18479494:-|nuORF;REV__ENST00000532739.1_1_16:16461165-16462877:+|nuORF;REV__nc|ENSG00000008710|P98161-2|PKD1;REV__nc|ENSG00000008710|P98161-3|PKD1	52.29916861842294	0.578018602984656	5				NaN	NaN	0	NaN	8076	4270	12347
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12349	34.803	NaN	1923.2	30	0	142.81	0.106			+	17953	IGRCELCEW	9	60	554.7488254631966	1107.483097993193	2	554.74853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IGRCELCEW_	REV__ENSG00000092140|ENST00000206595|G2E3;REV__ENST00000544007.5_1_14:31028384-31077115:+|nuORF	30.503639358989545	0.5181749237905803	5				NaN	NaN	0	NaN	8077	4270	12347
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12350	34.805	NaN	1145	30	0	192.3	0.106	+			50577	YCHYFEVR	8	59	558.7509155273438	NaN	0	558.7509155273438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YCHYFEVR_	tr|U7T3U9|U7T3U9_FUSNUReplicationproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00268PE=4SV=1	37.15910966729921	1.7418937515398478	5				NaN	NaN	0	NaN	8078	4270	12347
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12351	34.807	NaN	2711.3	30	0	305.97	0.035				-1	LFLFPRPM	8	66	518.7876924249084	1035.5608319166167	2	519.286865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_LFLFPRPM(Oxidation (M))_	ENST00000497188.1_1_1:155234069-155238352:-|nuORF	54.76467175910256	0.5536104764165384	5				NaN	NaN	0	NaN	8079	4270	12347
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12358	34.823	NaN	2096.7	30	0	281.84	0.214	+			39534	STFSEIFKK	9	60	543.796264893312	1085.577976853424	2	543.7957763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STFSEIFKK_	ENSG00000163931|ENST00000462138|TKT;ENST00000460343.5_1_3:53261754-53265639:-|nuORF;ENST00000461139.5_1_3:53259774-53265639:-|nuORF;ENST00000469678.1_1_3:53259917-53265542:-|nuORF;nc|ENSG00000163931|P29401-2|TKT	34.172542307311794	0.4838870758800184	5				NaN	NaN	0	NaN	8083	4273	12357
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12359	34.827	NaN	2299.6	30	0	234.73	0.106				-1	TVKKTMNM	8	61	484.7476518033077	967.4807506734154	2	484.7471008300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_TVKKTM(Oxidation (M))NM_	ENSG00000182628|ENST00000330137|SKA2;ENST00000583976.1_1_17:57189640-57232487:-|nuORF;SKA2|p.K91Nfs*13|1|0.07|ENSG00000182628|chr17:59119343-59119343|T/-|frameshift_variant	44.116797842482775	0.6307669463330267	5				NaN	NaN	0	NaN	8084	4273	12357
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12360	34.829	NaN	1675	30	0	196.99	0.106	+			29718	PHLCSAQGLAP	11	61	547.2737994160466	NaN	0	547.2741088867188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PHLCSAQGLAP_	AATK|p.F1101Sfs*3|1|0.46|ENSG00000181409|chr17:81120634-81120634|A/-|frameshift_variant;AATK|p.L1059Tfs*5|1|0.32|ENSG00000181409|chr17:81120762-81120763|-/G|frameshift_variant;ENSG00000181409|ENST00000326724|AATK;nc|ENSG00000181409|Q6ZMQ8-2|AATK;nc|ENSG00000181409|Q6ZMQ8-3|AATK	40.77816245573522	0.38155341215020716	5				NaN	NaN	0	NaN	8085	4273	12357
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12361	34.831	NaN	1770.9	30	0	107.8	0.106	+			6566	AYLDKSPQF	9	66	534.7728744447716	1067.531195956343	2	534.7721557617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AYLDKSPQF_	ENSG00000067248|ENST00000251636|DHX29;ENST00000504778.5_1_5:54552318-54579000:-|nuORF;ENST00000513447.1_1_5:54569247-54572159:-|nuORF	70.8162118820467	0.13725933411854815	5				NaN	NaN	0	NaN	8086	4273	12357
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12362	34.832	NaN	1334.2	30	0	261.6	0.041			+	-1	HPCIRRFARSL	11	63	706.888916015625	NaN	0	706.888916015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_HPC(Carbamidomethyl (C))IRRFARSL_	REV__ENST00000393094.6_1_11:107976541-107976730:+|nuORF	12.811709888998246	0.456735970842152	5				NaN	NaN	0	NaN	8087	4273	12357
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12371	34.853	NaN	18142	30	0	2048.5	0.215	+			6393	AVVFGITWI	9	77	503.29136744986533	1004.5681819665307	2	503.2900085449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVVFGITWI_	ENSG00000144820|ENST00000273352|ADGRG7	76.84663266511073	0.11118375776443899	5				NaN	NaN	0	NaN	8093	4276	12370
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12372	34.856	NaN	3761.8	30	0	628.79	0.106			+	45015	TVFELLVM	8	63	484.26150032115146	966.5084477091029	2	484.260009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_TVFELLVM(Oxidation (M))_	REV__CON__Q9U6Y5	62.97842346883844	0.4722955155785405	5				NaN	NaN	0	NaN	8094	4276	12370
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12373	34.858	NaN	3144.6	30	0	495.3	0.036			+	10348	ETTVPPPQLH	10	68	559.7970132919146	1117.579473650629	2	559.7962036132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ETTVPPPQLH_	REV__ENSG00000231925|ENST00000434618|TAPBP;REV__ENST00000480730.5_1_6:33272047-33272452:-|nuORF;REV__nc|ENSG00000231925|O15533-2|TAPBP;REV__nc|ENSG00000231925|O15533-3|TAPBP;REV__nc|ENSG00000231925|O15533-4|TAPBP	45.97224482568171	0.49411383603842696	5				NaN	NaN	0	NaN	8095	4276	12370
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12381	34.876	NaN	3092	30	0	325.57	0.214	+			42111	SYLDRTEQL	9	69	562.7837346774813	1123.5529164217626	2	562.7835083007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SYLDRTEQL_	ENSG00000065268|ENST00000585809|WDR18	98.58198989935565	0.04066992115528678	5				NaN	NaN	0	NaN	8100	4279	12380
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12382	34.88	NaN	2099.9	30	0	299.75	0.034	+			27974	MVLQCLRP	8	61	480.26278304945066	958.5110131657013	2	480.2618408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MVLQCLRP_	NALCN|p.R989Q|1|0.43|ENSG00000102452|chr13:101103263-101103263|C/T|missense_variant	50.0245360154114	0.5941082100236891	5				NaN	NaN	0	NaN	8101	4279	12380
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12387	34.895	NaN	2878.5	30	0	802.99	0.214			+	39848	STLLPLQR	8	58	464.28537656643334	926.5562001996667	2	464.2851867675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STLLPLQR_	REV__ENSG00000165271|ENST00000297990|NOL6;REV__nc|ENSG00000165271|Q9H6R4-2|NOL6;REV__nc|ENSG00000165271|Q9H6R4-4|NOL6;REV__NOL6|p.Q953Kfs*32|4|0.2|ENSG00000165271|chr9:33464084-33464084|G/-|frameshift_variant	73.97473282117947	0.3737790450121076	5				NaN	NaN	0	NaN	8103	4282	12386
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12388	34.898	NaN	1483	30	0	124.68	0.106			+	6884	CLLSAAVQFV	10	60	525.7842216492085	1049.5538903652168	2	525.7835083007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_CLLSAAVQFV_	REV__ENST00000392475.2_1_3:187003724-187009559:-|nuORF	32.81241826257853	0.6118718159329168	5				NaN	NaN	0	NaN	8104	4282	12386
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12389	34.9	NaN	2403	30	0	466.52	0.106			+	9713	EMLEAFKCAI	10	61	577.7796368003112	NaN	0	577.7804565429688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EMLEAFKCAI_	REV__ENST00000419888.1_1_20:18763070-18763415:-|nuORF	52.936696900407355	0.28703625529470256	5				NaN	NaN	0	NaN	8105	4282	12386
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12390	34.902	NaN	2126.2	30	0	233.6	0.106				-1	 	0	57	549.8306881709198	1097.6468234086394	2	549.8310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8106	4282	12386
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12391	34.904	NaN	1267.2	30	0	325.4	0.034			+	24347	LFLRGTAM	8	51	475.75909284809035	NaN	0	475.7601623535156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LFLRGTAM_	REV__ENST00000584803.1_1_17:8788046-8788097:-|nuORF	40.5726180659479	1.7418937515398478	5				NaN	NaN	0	NaN	8107	4282	12386
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12397	34.92	NaN	7206.4	30	0	728.16	0.215			+	-1	LMKFVLSY	8	75	508.7773474012926	1015.5401418693853	2	508.7760925292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LM(Oxidation (M))KFVLSY_	REV__ENST00000359015.4_1_6:136901492-136904739:-|nuORF	38.80614096846853	0.6637206697844082	5				NaN	NaN	0	NaN	8110	4285	12396
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12398	34.923	NaN	3288.7	30	0	340.57	0.106				-1	 	0	61	539.8302181580542	1077.6458833829083	2	539.8294677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8111	4285	12396
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12399	34.925	NaN	1457.1	30	0	122.25	0.106	+			20031	KEITALAPSTM	11	45	581.3138664049332	1160.6131798766662	2	581.3125610351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEITALAPSTM_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000184009|ENST00000573283|ACTG1;ENST00000415776.1_1_Y:19868883-19869072:-|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000493945.5_1_7:5567381-5567853:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2	35.17822180527639	0.6208003396870814	5				NaN	NaN	0	NaN	8112	4285	12396
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12400	34.927	NaN	5344.2	30	0	1915.9	0.106	+			11624	FPYVKRRI	8	51	360.2224673092161	1077.6455725278483	3	360.22149658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FPYVKRRI_	ENST00000553480.1_1_14:45329665-45330565:-|nuORF	37.028477286268924	0.6747514403204248	5				NaN	NaN	0	NaN	8113	4285	12396
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12401	34.929	NaN	1612.5	30	0	189.93	0.106			+	27238	MELMDGHLK	9	61	537.2589053460925	1072.503257758985	2	537.2587280273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MELMDGHLK_	REV__ENSG00000105287|ENST00000291281|PRKD2;REV__ENSG00000115825|ENST00000234179|PRKD3;REV__ENSG00000184304|ENST00000331968|PRKD1;REV__ENST00000597589.5_1_19:47177782-47200527:-|nuORF;REV__ENST00000599019.5_1_19:47177782-47200527:-|nuORF;REV__nc|ENSG00000105287|Q9BZL6-2|PRKD2;REV__nc|ENSG00000105287|Q9BZL6-3|PRKD2;REV__PRKD1|p.N701Kfs*6|1|0.26|ENSG00000184304|chr14:29599090-29599091|-/T|frameshift_variant	37.15910966729921	0.4535818937225704	5				NaN	NaN	0	NaN	8114	4285	12396
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12402	34.931	NaN	1119.3	30	0	176.64	0.106	+			7761	DNSTMGYMMAK	11	53	624.755615234375	NaN	0	624.755615234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DNSTMGYMMAK_	ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;ENST00000518337.1_1_8:74128289-74128592:-|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P	24.231819034082204	0.456735970842152	5				NaN	NaN	0	NaN	8115	4285	12396
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12403	34.933	NaN	1542.3	30	0	165.32	0.035			+	-1	CLLRANKL	8	52	494.2914368119993	986.5683206907986	2	494.2896728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_C(Carbamidomethyl (C))LLRANKL_	REV__ENSG00000115392|ENST00000233741|FANCL;REV__FANCL|p.L46S|1|0.35|ENSG00000115392|chr2:58232072-58232072|A/G|missense_variant;REV__nc|ENSG00000115392|Q9NW38-2|FANCL	35.200714571348534	0.6875396545722289	5				NaN	NaN	0	NaN	8116	4285	12396
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12414	34.956	NaN	9866.1	30	0	729.54	0.214				-1	 	0	71	507.78332619489214	1013.5520994565843	2	507.7823791503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8124	4288	12413
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12415	34.96	NaN	2252.1	30	0	405.41	0.106	+			28918	NQWFLPAV	8	52	487.75516860018666	NaN	0	487.7551574707031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NQWFLPAV_	ENSG00000111727|ENST00000229330|HCFC2;HCFC2|p.A339Hfs*2|1|0.43|ENSG00000111727|chr12:104082847-104082847|A/-|frameshift_variant;HCFC2|p.N309Ifs*32|4|0.23|ENSG00000111727|chr12:104082757-104082757|A/-|frameshift_variant;HCFC2|p.T56M|1|0.16|ENSG00000111727|chr12:104066170-104066170|C/T|missense_variant;nc|ENSG00000111727|Q9Y5Z7-2|HCFC2	28.2542754592877	1.7418937515398478	5				NaN	NaN	0	NaN	8125	4288	12413
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12416	34.962	NaN	1564.8	30	0	412.03	0.106	+			8516	EATLLQKL	8	45	458.28017433475213	914.5457957363043	2	458.27838134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EATLLQKL_	CCDC40|p.I914Tfs*84|1|0.32|ENSG00000141519|chr17:80089792-80089793|-/C|frameshift_variant;CCDC40|p.K1058Nfs*21|1|0.06|ENSG00000141519|chr17:80097395-80097395|A/-|frameshift_variant;ENSG00000141519|ENST00000397545|CCDC40;ENST00000572253.5_1_17:78055330-78055681:+|nuORF;ENST00000574799.5_1_17:78022329-78073571:+|nuORF;nc|ENSG00000141519|Q4G0X9-2|CCDC40;nc|ENSG00000141519|Q4G0X9-3|CCDC40	47.657333605630114	0.6087971902037268	5				NaN	NaN	0	NaN	8126	4288	12413
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12417	34.964	NaN	1326.2	30	0	151.59	0.106				-1	QPASEVTCSL	10	56	546.2549486894351	1090.49534444567	2	546.2540893554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_QPASEVTC(Carbamidomethyl (C))SL_	ENSG00000136378|ENST00000388820|ADAMTS7	27.047317107675042	0.6589519614906109	5				NaN	NaN	0	NaN	8127	4288	12413
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12418	34.965	NaN	2305.4	30	0	230.72	0.106	+			36235	SEMDTSVKF	9	67	522.2400504126554	1042.4655478921106	2	522.2392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SEMDTSVKF_	ENSG00000138448|ENST00000261023|ITGAV;ENST00000460641.1_1_2:187529903-187532515:+|nuORF;ITGAV|p.V806Hfs*11|1|0.07|ENSG00000138448|chr2:186667758-186667759|-/CATTTTCAAAA|frameshift_variant;nc|ENSG00000138448|P06756-2|ITGAV;nc|ENSG00000138448|P06756-3|ITGAV	62.107414245175825	0.1960472003779324	5				NaN	NaN	0	NaN	8128	4288	12413
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12419	34.967	NaN	995.71	30	0	66.516	0.106			+	49383	VVSYIFTL	8	47	471.2686637703921	NaN	0	471.26861572265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VVSYIFTL_	REV__SSTR2|p.F51S|1|0.11|ENSG00000180616|chr17:73169471-73169471|T/C|missense_variant	25.450171626174864	1.7418937515398478	5				NaN	NaN	0	NaN	8129	4288	12413
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12420	34.969	NaN	873.21	30	0	63.19	0.033	+			29616	PGAARPPPL	9	43	438.2576599121094	NaN	0	438.2576599121094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PGAARPPPL_	ENST00000570251.1_3_15:66678940-66679024:-|nuORF	26.79610172149135	0.34227917631780574	5				NaN	NaN	0	NaN	8130	4288	12413
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12429	34.991	NaN	6050	30	0	819.73	0.214				-1	 	0	64	460.2543368193138	918.4941207054276	2	460.2529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8136	4291	12428
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12430	34.994	NaN	4222.1	30	0	672.69	0.106	+			40526	STYYGSFVTR	10	63	590.7865262647497	1179.5584995962993	2	590.7850341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STYYGSFVTR_	EIF3H|p.S183Pfs*5|1|0.05|ENSG00000147677|chr8:116657225-116657225|A/-|frameshift_variant;ENSG00000147677|ENST00000521861|EIF3H;ENST00000517974.1_1_8:117671049-117768052:-|nuORF;ENST00000518034.5_1_8:117671049-117768048:-|nuORF	83.6470233535746	0.16744595502813267	5				NaN	NaN	0	NaN	8137	4291	12428
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12431	34.996	NaN	3262	30	0	372.81	0.106				-1	 	0	60	482.28580233398884	962.5570517347777	2	482.2843322753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8138	4291	12428
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12432	34.998	NaN	2024.7	30	0	321.26	0.106			+	51205	YPPVNLVF	8	54	474.7619810260988	947.5094091189976	2	474.7608947753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YPPVNLVF_	REV__ENSG00000189306|ENST00000323013|RRP7A;REV__ENST00000483303.1_1_22:42912068-42915792:-|nuORF	54.76467175910256	0.5536104764165384	5				NaN	NaN	0	NaN	8139	4291	12428
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12433	35	NaN	2281.8	30	0	386.44	0.106	+			48381	VTHISLEEP	9	59	512.7673436940818	1023.5201344549636	2	512.7692260742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTHISLEEP_	ENSG00000139192|ENST00000266556|TAPBPL;ENST00000539384.5_1_12:6560901-6571312:+|nuORF;nc|ENSG00000139192|Q9BX59-2|TAPBPL;nc|ENSG00000139192|Q9BX59-7|TAPBPL	35.61828744233558	0.47037581924408073	5				NaN	NaN	0	NaN	8140	4291	12428
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12434	35.002	NaN	2315.7	30	0	178.78	0.106			+	-1	YRTEITMGK	9	67	557.7792541116941	1113.543955290188	2	557.7806396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_YRTEITM(Oxidation (M))GK_	REV__tr|U7SU95|U7SU95_FUSNUDUF4846domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01150PE=4SV=1	51.19269402634007	0.2889735674168909	5				NaN	NaN	0	NaN	8141	4291	12428
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12435	35.003	NaN	1534.1	30	0	134.4	0.037			+	-1	FMKEKAEIE	9	60	570.7856185050545	1139.5566840769088	2	571.2884521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_FM(Oxidation (M))KEKAEIE_	REV__ENSG00000168356|ENST00000302328|SCN11A;REV__nc|ENSG00000168356|Q9UI33-2|SCN11A;REV__nc|ENSG00000168356|Q9UI33-3|SCN11A;REV__SCN11A|p.F723Lfs*37|1|0.39|ENSG00000168356|chr3:38897079-38897079|A/-|frameshift_variant;REV__SCN11A|p.K457Rfs*15|1|0.1|ENSG00000168356|chr3:38908052-38908052|T/-|frameshift_variant	33.921630207806714	0.48623198279849766	5				NaN	NaN	0	NaN	8142	4291	12428
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12446	35.029	NaN	27987	30	0	1820.7	0.214				-1	LKDIYGNKM	9	81	549.2863240881225	1096.5580952430448	2	549.2852783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LKDIYGNKM(Oxidation (M))_	ENSG00000182836|ENST00000377801|PLCXD3	82.24051045832904	0.08786059719216216	5				NaN	NaN	0	NaN	8150	4294	12445
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12447	35.033	NaN	4927.6	30	0	563.3	0.106			+	19784	KEALQGLKL	9	65	500.3142003701309	998.6138478070618	2	500.3133544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEALQGLKL_	REV__ENST00000394518.6_1_15:86288946-86289057:+|nuORF	104.0567914643314	0.03506238181059741	5				NaN	NaN	0	NaN	8151	4294	12445
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12448	35.035	NaN	2780.8	30	0	239.54	0.106			+	29939	PMNRKPIK	8	72	492.2945323703113	982.5745118074226	2	492.29290771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PMNRKPIK_	REV__ENST00000284503.6_1_8:11627404-11629042:+|nuORF;REV__ENST00000455213.6_1_8:11627262-11629042:+|nuORF	33.51558372728122	0.7005509609380386	5				NaN	NaN	0	NaN	8152	4294	12445
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12449	35.036	NaN	2348.3	30	0	110.55	0.106				-1	GICSVSGLVL	10	67	502.7750866207541	1003.5356203083082	2	502.7747802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_GIC(Carbamidomethyl (C))SVSGLVL_	nc|ENSG00000197658|Q8N4F4-1|SLC22A24	44.116797842482775	0.5112108506279902	5				NaN	NaN	0	NaN	8153	4294	12445
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12450	35.038	NaN	3243.7	30	0	330.12	0.106	+			12722	GEKTIIITC	9	60	489.27155987090623	976.5285668086125	2	489.2705383300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GEKTIIITC_	ENSG00000174231|ENST00000304992|PRPF8	59.93077597824379	0.21419174904018318	5				NaN	NaN	0	NaN	8154	4294	12445
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12451	35.04	NaN	5356.1	30	0	556.74	0.106	+			8486	EASKYIMQY	9	72	566.7718563000628	1131.5291596669256	2	566.7711791992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EASKYIMQY_	ENSG00000176658|ENST00000318217|MYO1D	138.8255168832474	0.011031062795199845	5				NaN	NaN	0	NaN	8155	4294	12445
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12452	35.042	NaN	2566.6	30	0	470.46	0.036			+	51270	YRNDSTIVF	9	62	557.7792541116941	1113.543955290188	2	558.2786254882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YRNDSTIVF_	REV__ENSG00000198589|ENST00000651943|LRBA;REV__ENST00000503716.5_1_4:151186876-151502511:-|nuORF;REV__ENST00000515096.5_1_4:151186876-151231561:-|nuORF;REV__nc|ENSG00000198589|P50851-2|LRBA;REV__nc|ENSG00000198589|P50851|LRBA	51.33545320467046	0.2872990594074956	5				NaN	NaN	0	NaN	8156	4294	12445
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12460	35.06	NaN	5038.9	30	0	531.63	0.214	+			11776	FSLQEFFY	8	74	540.7548721186731	1079.4951913041461	2	540.754150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FSLQEFFY_	ENST00000495263.2_2_11:67380310-67380676:-|nuORF	79.71258880314673	0.32596852995588826	5				NaN	NaN	0	NaN	8161	4297	12459
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12461	35.064	NaN	4242.5	30	0	1035.9	0.106	+			17832	IFGSVRALHK	10	65	564.3380240360148	1126.6614951388294	2	564.3377685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IFGSVRALHK_	ACSM3|p.T549Nfs*29|2|0.31|ENSG00000005187|chr16:20796453-20796454|-/A|frameshift_variant;ENSG00000005187|ENST00000289416|ACSM3;nc|ENSG00000005187|Q53FZ2-2|ACSM3	24.231819034082204	0.6819444564287812	5				NaN	NaN	0	NaN	8162	4297	12459
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12462	35.066	NaN	1697.8	30	0	429.71	0.106				-1	 	0	50	455.7905681594728	909.5665833857456	2	455.7892761230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8163	4297	12459
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12463	35.067	NaN	1104.7	30	0	151.28	0.034	+			446	AAVGVVAGGLL	11	51	463.7870732750095	NaN	0	463.7868347167969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AAVGVVAGGLL_	ENSG00000182685|ENST00000328540|BRICD5;nc|ENSG00000182685|Q6PL45|BRICD5	31.954861631926434	0.423006731851301	5				NaN	NaN	0	NaN	8164	4297	12459
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12472	35.087	NaN	4409.7	30	0	711.17	0.214	+			23997	LEAGALDVLV	10	74	500.29045358033966	998.5663542274793	2	500.289794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LEAGALDVLV_	tr|U7T5J0|U7T5J0_FUSNUGlycolateoxidase,subunitGlcDOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00166PE=4SV=1	74.25504064058377	0.24255678544297835	5				NaN	NaN	0	NaN	8170	4300	12471
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12473	35.091	NaN	2241.9	30	0	144.14	0.106	+			715	AEASMISKL	9	59	475.2548131362199	NaN	0	475.2561340332031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEASMISKL_	ENSG00000055130|ENST00000325222|CUL1	72.87924865735499	0.09578366712754152	5				NaN	NaN	0	NaN	8171	4300	12471
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12474	35.093	NaN	1249.7	30	0	178.46	0.106	+			3081	ASFWPFGPV	9	52	504.2536104988202	1006.4926680644404	2	504.2525634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASFWPFGPV_	ENSG00000162009|ENST00000689027|SSTR5	24.20275056022122	0.577060078256802	5				NaN	NaN	0	NaN	8172	4300	12471
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12475	35.095	NaN	2606	30	0	184.72	0.106			+	23371	KYYNKCQY	8	72	555.2568319645575	NaN	0	555.2514038085938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KYYNKCQY_	REV__ENSG00000257017|ENST00000355906|HP;REV__ENSG00000257017|ENST00000355906|HP;REV__ENST00000561927.3_16:72090108-72091373:+|nuORF;REV__ENST00000562488.1_16:72088551-72092313:+|nuORF;REV__ENST00000562488.1_16:72088551-72092313:+|nuORF;REV__ENST00000565807.2_16:72088551-72090589:+|nuORF;REV__HP|p.R59C|1|0.18|ENSG00000257017|chr16:72056616-72056616|C/T|missense_variant;REV__nc|ENSG00000257017|P00738-2|HP	47.91560031466742	1.7418937515398478	5				NaN	NaN	0	NaN	8173	4300	12471
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12476	35.097	NaN	1936.5	30	0	421.82	0.035				-1	 	0	38	336.5349712988227	1006.5830844966681	3	336.53436279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8174	4300	12471
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12487	35.12	NaN	5933.9	30	0	714.53	0.214	+			28287	NEASVLHNL	9	74	498.75984473064136	995.5051365280827	2	498.7587585449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NEASVLHNL_	ENSG00000078814|ENST00000262873|MYH7B;ENSG00000100345|ENST00000216181|MYH9;ENSG00000105357|ENST00000642316|MYH14;ENSG00000133026|ENST00000360416|MYH10;ENSG00000133392|ENST00000300036|MYH11;MYH10|p.A411Pfs*11|1|0.15|ENSG00000133026|chr17:8546562-8546562|T/-|frameshift_variant;MYH14|p.G549Wfs*8|1|0.23|ENSG00000105357|chr19:50250519-50250520|-/C|frameshift_variant;MYH14|p.L1950Sfs*14|1|0.34|ENSG00000105357|chr19:50309646-50309646|C/-|frameshift_variant;MYH14|p.M997*|1|0.19|ENSG00000105357|chr19:50271483-50271483|A/-|frameshift_variant;MYH14|p.P548Lfs*25|2|0.32|ENSG00000105357|chr19:50250520-50250520|C/-|frameshift_variant;MYH14|p.R929Gfs*44|1|0.38|ENSG00000105357|chr19:50268237-50268237|G/-|frameshift_variant;MYH9|p.C91Y|1|0.25|ENSG00000100345|chr22:36348965-36348965|C/T|missense_variant;MYH9|p.I784*|1|0.07|ENSG00000100345|chr22:36304036-36304036|G/-|frameshift_variant;nc|ENSG00000078814|A7E2Y1-2|MYH7B;nc|ENSG00000078814|A7E2Y1|MYH7B;nc|ENSG00000105357|Q7Z406-4|MYH14;nc|ENSG00000105357|Q7Z406-5|MYH14;nc|ENSG00000105357|Q7Z406-6|MYH14;nc|ENSG00000105357|Q7Z406|MYH14;nc|ENSG00000133026|P35580-2|MYH10;nc|ENSG00000133026|P35580-3|MYH10;nc|ENSG00000133026|P35580-5|MYH10;nc|ENSG00000133026|P35580|MYH10;nc|ENSG00000133392|P35749-2|MYH11;nc|ENSG00000133392|P35749-3|MYH11;nc|ENSG00000133392|P35749-4|MYH11	134.7655990226056	0.012935733000282069	5				NaN	NaN	0	NaN	8182	4303	12486
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12488	35.124	NaN	3144.3	30	0	711.23	0.106	+			45271	TVQLEDVKL	9	61	522.8013645712299	1043.5881762092597	2	522.800537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVQLEDVKL_	tr|U7STB7|U7STB7_FUSNUDNApolymeraseIOS=FusobacteriumnucleatumCTI-5OX=1316586GN=polAPE=3SV=1	49.536043120802724	0.308405419312776	5				NaN	NaN	0	NaN	8183	4303	12486
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12489	35.126	NaN	2477.6	30	0	268.25	0.106	+			25838	LSDYVKVSN	9	64	512.7673436940818	1023.5201344549636	2	512.7623291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSDYVKVSN_	ENSG00000119203|ENST00000238112|CPSF3	52.936696900407355	0.27249468807391813	5				NaN	NaN	0	NaN	8184	4303	12486
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12490	35.128	NaN	2331.8	30	0	241.21	0.106	+			2934	ASCTVILKY	9	54	527.7849279978857	1053.5553030625713	2	527.7850341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_ASC(Carbamidomethyl (C))TVILKY_	ENST00000463441.5_1_7:150020319-150023055:+|nuORF;ENST00000493307.1_1_7:150020428-150023055:+|nuORF	79.71258880314673	0.09879134589249085	5				NaN	NaN	0	NaN	8185	4303	12486
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12491	35.129	NaN	760.1	30	0	105.23	0.106				-1	 	0	35	348.77342425338264	695.5322955735653	2	348.77252197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8186	4303	12486
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12492	35.131	NaN	1552.1	30	0	82.991	0.038	+			10952	FDVPVGSRGDC	11	62	604.7696533203125	NaN	0	604.7696533203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_FDVPVGSRGDC(Carbamidomethyl (C))_	ENSG00000158864|ENST00000676972|NDUFS2;ENST00000483804.5_1_1:161179060-161183980:+|nuORF;nc|ENSG00000158864|O75306-2|NDUFS2	51.19269402634007	0.30675235723580535	5				NaN	NaN	0	NaN	8187	4303	12486
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12505	35.159	NaN	11270	30	0	1985.3	0.214				-1	 	0	65	479.80122904070606	957.5879051482121	2	479.7998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8197	4306	12504
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12506	35.163	NaN	11182	30	0	2856	0.106				-1	 	0	67	487.28305507719864	972.5515572211973	2	487.2812805175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8198	4306	12504
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12507	35.165	NaN	5539.3	30	0	1041.2	0.106				-1	 	0	63	491.24914042060266	980.4837279080053	2	491.248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8199	4306	12504
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12508	35.166	NaN	3740.5	30	0	801.87	0.106	+			12958	GESVTKLTL	9	62	474.2732890673077	NaN	0	474.2734680175781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GESVTKLTL_	ENSG00000116830|ENST00000369466|TTF2;ENST00000480701.1_1_1:117641440-117644143:+|nuORF;ENST00000492682.5_1_1:117640837-117644143:+|nuORF	56.43379154798735	0.16452882468284893	5				NaN	NaN	0	NaN	8200	4306	12504
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12509	35.168	NaN	2706.3	30	0	229.56	0.106			+	618	ADTVTAYGEY	10	67	545.2385487739115	1088.4625446146229	2	545.7385864257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ADTVTAYGEY_	REV__ENSG00000254986|ENST00000531863|DPP3;REV__nc|ENSG00000254986|Q9NY33-2|DPP3;REV__nc|ENSG00000254986|Q9NY33-4|DPP3	58.78195531508484	0.37691818691852547	5				NaN	NaN	0	NaN	8201	4306	12504
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12510	35.17	NaN	2697.4	30	0	673.54	0.106			+	-1	RCTWPKPDMR	10	55	653.3154245788237	1304.6162962244473	2	653.3135375976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_RCTWPKPDM(Oxidation (M))R_	REV__ENST00000373425.7_1_9:129884849-129884891:-|nuORF	27.882242232435846	0.6521336255503853	5				NaN	NaN	0	NaN	8202	4306	12504
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12511	35.172	NaN	2956.1	30	0	219.84	0.038	+			48703	VTTLKTVLDQQ	11	75	623.3575153656875	1244.700477798175	2	623.3573608398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VTTLKTVLDQQ_	ENSG00000138095|ENST00000260665|LRPPRC;ENST00000463456.5_1_2:44115741-44128754:-|nuORF	50.033510581677724	0.4206539900604183	5				NaN	NaN	0	NaN	8203	4306	12504
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12524	35.199	NaN	1959.7	30	0	244.96	0.214	+			28165	NAMNMQETY	9	61	551.2214561767479	1100.4283594202957	2	551.2208251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAMNMQETY_	ENSG00000114520|ENST00000251775|SNX4;ENST00000473417.5_1_3:125188296-125239016:-|nuORF	72.87924865735499	0.12833875048249987	5				NaN	NaN	0	NaN	8213	4309	12523
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12525	35.203	NaN	2087.4	30	0	149.35	0.036			+	-1	MNLAVNVTAL	10	63	531.2877086832437	1060.5608644332874	2	531.2874145507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_M(Oxidation (M))NLAVNVTAL_	REV__ENSG00000095319|ENST00000372577|NUP188;REV__nc|ENSG00000095319|Q5SRE5-2|NUP188	45.97224482568171	0.49411383603842696	5				NaN	NaN	0	NaN	8214	4309	12523
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12532	35.221	NaN	2526.7	30	0	257.61	0.214			+	28007	MVYLERSE	8	63	513.7506644283368	1025.4867759234735	2	513.75	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MVYLERSE_	REV__ENSG00000108582|ENST00000225719|CPD;REV__nc|ENSG00000108582|O75976-2|CPD	38.80614096846853	0.6637206697844082	5				NaN	NaN	0	NaN	8218	4312	12531
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12533	35.224	NaN	3158.4	30	0	420.55	0.106	+			50620	YEAELRTTL	9	72	548.2890090476085	1094.5634651620169	2	548.2882690429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YEAELRTTL_	ENSG00000232629|ENST00000437316|HLA-DQB2;nc|ENSG00000232629|P05538-2|HLA-DQB2;nc|ENSG00000232629|P05538|HLA-DQB2	56.632244143249146	0.24168844994051353	5				NaN	NaN	0	NaN	8219	4312	12531
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12534	35.226	NaN	3183.1	30	0	998.84	0.106	+			38399	SRYQPLQY	8	57	527.7701072287758	1053.5256615243516	2	527.7696533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SRYQPLQY_	nc|ENSG00000136709|Q9C0J8-2|WDR33	40.5726180659479	0.6527593143185008	5				NaN	NaN	0	NaN	8220	4312	12531
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12535	35.228	NaN	4760.4	30	0	1145.1	0.106	+			33257	RGESLLCVAP	10	66	522.7783917964682	1043.5422306597363	2	522.7777099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RGESLLCVAP_	ZBTB14|p.K387Sfs*18|1|0.29|ENSG00000198081|chr18:5291048-5291048|T/-|frameshift_variant	29.14955571784316	0.6417842315402807	5				NaN	NaN	0	NaN	8221	4312	12531
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12536	35.23	NaN	1840.8	30	0	325.63	0.106	+			48251	VTDFVLLGF	9	53	505.78014648167726	1009.5457400301545	2	505.7796936035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTDFVLLGF_	ENSG00000237388|ENST00000446524|OR4A47;nc|ENSG00000254769|Q8NGN8|OR4A4P;OR4A47|p.C177Lfs*2|1|0.28|ENSG00000237388|chr11:48489313-48489314|-/T|frameshift_variant	40.5726180659479	0.4135428067754104	5				NaN	NaN	0	NaN	8222	4312	12531
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12537	35.232	NaN	4431.1	30	0	1570.7	0.106			+	-1	CCEMVIWLD	9	61	414.5045894455009	1240.4919389367028	3	414.5035400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Carbamidomethyl (C),Oxidation (M)	_C(Carbamidomethyl (C))C(Carbamidomethyl (C))EM(Oxidation (M))VIWLD_	REV__STK4|p.Y104C|1|0.35|ENSG00000101109|chr20:44981894-44981894|A/G|missense_variant	24.519189625965996	0.574102787014149	5				NaN	NaN	0	NaN	8223	4312	12531
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12538	35.234	NaN	1529.1	30	0	119.64	0.038	+			37553	SLMGKRVSSNI	11	57	596.3288460758965	1190.643139218593	2	596.327392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SLMGKRVSSNI_	ENSG00000146469|ENST00000367244|VIP	36.446750945000026	0.6065623449959539	5				NaN	NaN	0	NaN	8224	4312	12531
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12547	35.254	NaN	14941	30	0	1002.2	0.214				-1	 	0	62	471.7910894950482	941.5676260568964	2	471.7897033691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8230	4315	12546
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12548	35.257	NaN	2864.1	30	0	522.75	0.106				-1	 	0	57	458.2513890796507	914.4882252261015	2	458.2500915527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8231	4315	12546
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12549	35.259	NaN	1749.4	30	0	655.16	0.106			+	-1	LCGSSRWESC	10	51	621.2533612691453	1240.4921696050906	2	621.2517700195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_LC(Carbamidomethyl (C))GSSRWESC(Carbamidomethyl (C))_	REV__ENST00000318529.12_1_X:152086413-152086605:+|nuORF	29.14955571784316	0.6417842315402807	5				NaN	NaN	0	NaN	8232	4315	12546
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12550	35.261	NaN	2979	30	0	217.44	0.106	+			41564	SVQETVLPIK	10	68	557.3301794422058	1112.6458059512115	2	557.3291625976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVQETVLPIK_	ENSG00000169057|ENST00000453960|MECP2;MECP2|p.E432Afs*3|1|0.03|ENSG00000169057|chrX:154030534-154030535|CC/-|frameshift_variant;MECP2|p.K449Sfs*33|1|0.2|ENSG00000169057|chrX:154030482-154030482|T/-|frameshift_variant;nc|ENSG00000169057|P51608|MECP2	92.23892857375223	0.11825556496531454	5				NaN	NaN	0	NaN	8233	4315	12546
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12551	35.263	NaN	1807.9	30	0	220.7	0.106	+			11078	FETIVKQQI	9	65	553.3175258955324	1104.6204988578647	2	553.3160400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FETIVKQQI_	ENSG00000157601|ENST00000398598|MX1;ENST00000486275.1_1_21:42817479-42821257:+|nuORF	70.8162118820467	0.13725933411854815	5				NaN	NaN	0	NaN	8234	4315	12546
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12552	35.265	NaN	1731.8	30	0	241.46	0.106	+			36332	SESSIDRLM	9	64	519.2522250802863	1036.4898972273725	2	519.7525634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SESSIDRLM_	ENSG00000181789|ENST00000314797|COPG1	41.42661286455405	0.403525789677298	5				NaN	NaN	0	NaN	8235	4315	12546
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12553	35.266	NaN	1558.6	30	0	182.04	0.037			+	-1	KACPPMTINL	10	51	580.7914892062172	1159.5684254792343	2	580.7891235351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C),Oxidation (M)	_KAC(Carbamidomethyl (C))PPM(Oxidation (M))TINL_	REV__ENSG00000029534|ENST00000289734|ANK1;REV__ENST00000524227.5_1_8:41525962-41555361:-|nuORF;REV__KIAA0146-ANK1|1|fusion;REV__KIAA0146-ANK1|2|fusion;REV__KIAA0146-ANK1|3|fusion;REV__KIAA0146-ANK1|4|fusion;REV__KIAA0146-ANK1|5|fusion;REV__nc|ENSG00000029534|P16157-10|ANK1;REV__nc|ENSG00000029534|P16157-11|ANK1;REV__nc|ENSG00000029534|P16157-12|ANK1;REV__nc|ENSG00000029534|P16157-13|ANK1;REV__nc|ENSG00000029534|P16157-14|ANK1;REV__nc|ENSG00000029534|P16157-15|ANK1;REV__nc|ENSG00000029534|P16157-16|ANK1;REV__nc|ENSG00000029534|P16157-2|ANK1;REV__nc|ENSG00000029534|P16157-21|ANK1;REV__nc|ENSG00000029534|P16157-4|ANK1;REV__nc|ENSG00000029534|P16157-5|ANK1;REV__nc|ENSG00000029534|P16157-6|ANK1;REV__nc|ENSG00000029534|P16157-7|ANK1;REV__nc|ENSG00000029534|P16157-8|ANK1;REV__nc|ENSG00000029534|P16157-9|ANK1;REV__nc|ENSG00000029534|P16157|ANK1	29.170058357718403	0.6416167986984785	5				NaN	NaN	0	NaN	8236	4315	12546
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12564	35.29	NaN	4786.5	30	0	661.08	0.143				-1	 	0	62	491.7832181529412	981.5518833726824	2	491.7821044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8244	4318	12563
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12570	35.307	NaN	2131	30	0	274.34	0.214				-1	 	0	45	379.2103556193345	756.406158305469	2	379.2091064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8247	4321	12569
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12571	35.31	NaN	1446.6	30	0	216.86	0.106	+			36333	SESSIDRLM	9	56	519.2522250802863	1036.4898972273725	2	519.7507934570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SESSIDRLM_	ENSG00000181789|ENST00000314797|COPG1	49.536043120802724	0.308405419312776	5				NaN	NaN	0	NaN	8248	4321	12569
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12572	35.312	NaN	2757	30	0	339.52	0.106	+			7014	CRVPLETCM	9	70	554.7513289338821	NaN	0	554.7531127929688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_CRVPLETC(Carbamidomethyl (C))M_	ENSG00000185775|ENST00000332857|SPATA31A6;ENSG00000204849|ENST00000377647|SPATA31A1;ENSG00000275969|ENST00000428649|SPATA31A3;ENSG00000276040|ENST00000619167|SPATA31A7;ENSG00000276581|ENST00000437823|SPATA31A5;SPATA31A1|p.T1192Nfs*14|1|0.28|ENSG00000204849|chr9:39361333-39361334|-/A|frameshift_variant;SPATA31A1|p.T1192Qfs*2|2|0.24|ENSG00000204849|chr9:39361334-39361334|A/-|frameshift_variant;SPATA31A3|p.S1180Kfs*9|1|0.25|ENSG00000275969|chr9:66986959-66986960|-/T|frameshift_variant;SPATA31A6|p.N1191Tfs*16|1|0.12|ENSG00000185775|chr9:42189269-42189269|A/-|frameshift_variant;SPATA31A6|p.T1188Qfs*2|1|0.26|ENSG00000185775|chr9:42189259-42189259|A/-|frameshift_variant	49.44154591367651	0.21054156626303966	5				NaN	NaN	0	NaN	8249	4321	12569
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12573	35.314	NaN	828.42	30	0	48.446	0.033			+	17321	IAGEGITVN	9	43	437.2378234863281	NaN	0	437.2378234863281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IAGEGITVN_	REV__tr|U7T3R9|U7T3R9_FUSNUUDP-3-O-acylglucosamineN-acyltransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=lpxDPE=3SV=1	37.15910966729921	0.2899585034171616	5				NaN	NaN	0	NaN	8250	4321	12569
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12579	35.33	NaN	1478.7	30	0	148.76	0.214	+			9293	EHPRLRRPM	9	61	596.3288460758965	1190.643139218593	2	596.327392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EHPRLRRPM_	ENSG00000243232|ENST00000289269|PCDHAC2;nc|ENSG00000243232|Q9Y5I4-2|PCDHAC2;PCDHAC2|p.Y622Lfs*8|1|0.23|ENSG00000243232|chr5:140968624-140968625|-/T|frameshift_variant	29.14955571784316	0.5308295550522326	5				NaN	NaN	0	NaN	8253	4324	12578
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12580	35.334	NaN	2195.3	30	0	351.28	0.036	+			34874	RYTLQASTF	9	55	543.7840430499687	1085.5535331667372	2	543.7838134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RYTLQASTF_	ENSG00000055130|ENST00000325222|CUL1	58.22992032128504	0.22837015374068087	5				NaN	NaN	0	NaN	8254	4324	12578
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12589	35.356	NaN	2565.6	30	0	293.04	0.214	+			27803	MSEKQLKQ	8	61	504.26254359797696	1006.5105342627539	2	504.2615051269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))SEKQLKQ_	ENSG00000134318|ENST00000315872|ROCK2;ROCK2|p.K1351Sfs*17|1|0.34|ENSG00000134318|chr2:11192259-11192259|T/-|frameshift_variant	63.30626980617807	0.4690498839812213	5				NaN	NaN	0	NaN	8260	4327	12588
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12590	35.359	NaN	1384.7	30	0	106.22	0.106	+			23603	LANPHELSL	9	56	497.27286822036206	992.5311835075241	2	497.2713928222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LANPHELSL_	ENSG00000197312|ENST00000480945|DDI2;ENST00000486680.1_1_1:15944165-15960061:+|nuORF;nc|ENSG00000197312|Q5TDH0-2|DDI2;nc|ENSG00000197312|Q5TDH0-3|DDI2	66.42927471994793	0.16001998865088202	5				NaN	NaN	0	NaN	8261	4327	12588
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12591	35.361	NaN	2129.9	30	0	376.81	0.106				-1	 	0	44	440.7673213473164	879.5200897614328	2	440.76605224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8262	4327	12588
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12592	35.363	NaN	2290.1	30	0	201.3	0.106			+	35681	SDHVDPLLY	9	63	529.7598410084232	1057.5051290836464	2	530.2590942382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SDHVDPLLY_	REV__ENSG00000228594|ENST00000422725|FNDC10	45.9519527083369	0.35044536499095585	5				NaN	NaN	0	NaN	8263	4327	12588
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12593	35.365	NaN	1234.4	30	0	305.56	0.034				-1	VTVILCRM	8	41	475.75909284809035	NaN	0	475.7593994140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_VTVILCRM(Oxidation (M))_	ENSG00000066468|ENST00000358487|FGFR2;ENST00000604236.5_1_10:123239373-123278228:-|nuORF;nc|ENSG00000066468|P21802-16|FGFR2;nc|ENSG00000066468|P21802-17|FGFR2;nc|ENSG00000066468|P21802-18|FGFR2;nc|ENSG00000066468|P21802-2|FGFR2;nc|ENSG00000066468|P21802-20|FGFR2;nc|ENSG00000066468|P21802-21|FGFR2;nc|ENSG00000066468|P21802-22|FGFR2;nc|ENSG00000066468|P21802-23|FGFR2;nc|ENSG00000066468|P21802-3|FGFR2;nc|ENSG00000066468|P21802-4|FGFR2;nc|ENSG00000066468|P21802-5|FGFR2;nc|ENSG00000066468|P21802-6|FGFR2;nc|ENSG00000066468|P21802-8|FGFR2	26.79610172149135	1.7418937515398478	5				NaN	NaN	0	NaN	8264	4327	12588
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12601	35.383	NaN	2327.5	30	0	214.91	0.214			+	48682	VTTFQIALS	9	60	490.2760123956541	NaN	0	490.27587890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTTFQIALS_	REV__CFAP54|p.N1771T|1|0.27|ENSG00000188596|chr12:96658093-96658093|A/C|missense_variant	49.44154591367651	0.21054156626303966	5				NaN	NaN	0	NaN	8269	4330	12600
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12602	35.387	NaN	2401.5	30	0	201.74	0.106	+			1011	AEKLEALSV	9	57	480.27521918411816	958.5358854350363	2	480.27386474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEKLEALSV_	ENSG00000099901|ENST00000430524|RANBP1;ENST00000435265.5_1_22:20114425-20114572:+|nuORF;ENST00000448394.2_1_22:20110177-20114572:+|nuORF;nc|ENSG00000099901|P43487-2|RANBP1;nc|ENSG00000099901|P43487|RANBP1	78.26377905018397	0.10505600812668463	5				NaN	NaN	0	NaN	8270	4330	12600
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12603	35.389	NaN	1795.5	30	0	169.77	0.106	+			50273	WRLLGAVRG	9	59	514.3120808260155	1026.609608718831	2	514.3108520507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_WRLLGAVRG_	ENSG00000179399|ENST00000377067|GPC5;GPC5|p.D168*|2|0.41|ENSG00000179399|chr13:91693356-91693357|-/T|frameshift_variant	63.30626980617807	0.18605348971131092	5				NaN	NaN	0	NaN	8271	4330	12600
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12604	35.39	NaN	1653.4	30	0	253.13	0.106	+			23299	KYNDFGNSF	9	65	546.2432113281207	NaN	0	546.2433471679688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KYNDFGNSF_	ENSG00000166526|ENST00000299667|ZNF3;ENST00000487620.1_1_7:99668768-99673049:-|nuORF	54.722347961057174	0.17414871455573902	5				NaN	NaN	0	NaN	8272	4330	12600
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12605	35.392	NaN	3316.6	30	0	407.39	0.106	+			4028	ATDAVGIVLK	10	65	493.797468638937	NaN	0	493.7978210449219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATDAVGIVLK_	ENSG00000132676|ENST00000368336|DAP3;ENST00000462978.1_1_1:155697409-155701908:+|nuORF;nc|ENSG00000132676|P51398-2|DAP3;nc|ENSG00000132676|P51398-3|DAP3	61.691277971877994	0.22046696034287383	5				NaN	NaN	0	NaN	8273	4330	12600
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12606	35.394	NaN	1702.2	30	0	311.79	0.037			+	32569	QWFFSSYST	9	52	576.7542392191684	1151.4939255051368	2	576.754638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QWFFSSYST_	REV__ENST00000586173.1_1_19:30099701-30099833:+|nuORF	37.15910966729921	0.4535818937225704	5				NaN	NaN	0	NaN	8274	4330	12600
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12619	35.422	NaN	5191.4	30	0	499.64	0.214	+			27579	MPIVHRDL	8	67	490.7719858092547	979.5294186853095	2	490.7703857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MPIVHRDL_	ENSG00000163513|ENST00000295754|TGFBR2;nc|ENSG00000163513|P37173-2|TGFBR2;TGFBR2|p.H523Rfs*19|1|0.27|ENSG00000163513|chr3:30691458-30691459|-/GACC|frameshift_variant	44.377184641726394	0.6291511924298419	5				NaN	NaN	0	NaN	8284	4333	12618
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12620	35.426	NaN	2742.2	30	0	495.59	0.106	+			16862	HPGARLLPPGL	11	64	564.3380240360148	1126.6614951388294	2	564.3375854492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HPGARLLPPGL_	ENST00000301015.13_2_16:88800318-88802577:-|nuORF	28.5767321226876	0.690044582712672	5				NaN	NaN	0	NaN	8285	4333	12618
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12621	35.428	NaN	3213.8	30	0	323.95	0.035	+			1384	AEVKGVYQF	9	66	520.7756490585593	1039.5367451839186	2	520.7748413085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEVKGVYQF_	ENSG00000166557|ENST00000299705|TMED3;nc|ENSG00000166557|Q9Y3Q3-2|TMED3	79.71258880314673	0.09879134589249085	5				NaN	NaN	0	NaN	8286	4333	12618
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12626	35.442	NaN	2338	30	0	737.17	0.214	+			25035	LLHKHLHL	8	50	505.81690991506395	1009.6192668969279	2	505.8159484863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LLHKHLHL_	ENSG00000096433|ENST00000605930|ITPR3;ITPR3|p.N1746Tfs*30|1|0.2|ENSG00000096433|chr6:33684872-33684872|A/-|frameshift_variant;ITPR3|p.R2604Gfs*30|1|0.27|ENSG00000096433|chr6:33694944-33694944|C/-|frameshift_variant	29.841539824830324	0.7289191502596711	5				NaN	NaN	0	NaN	8288	4336	12625
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12627	35.446	NaN	1483.4	30	0	341.82	0.106				-1	 	0	41	357.21532899848665	712.4161050637733	2	357.2146911621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8289	4336	12625
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12628	35.448	NaN	2337.5	30	0	299.85	0.106			+	50023	WDFGLAKVL	9	59	524.794125343966	1047.573697754732	2	524.7932739257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_WDFGLAKVL_	REV__WDFY3|p.T1665A|1|0.22|ENSG00000163625|chr4:84766005-84766005|T/C|missense_variant	73.97473282117947	0.12360187025703594	5				NaN	NaN	0	NaN	8290	4336	12625
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12629	35.449	NaN	1555.3	30	0	425.34	0.106				-1	ASMKKVKSL	9	30	336.5342235908448	NaN	0	336.53411865234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_ASM(Oxidation (M))KKVKSL_	ENST00000369426.9_1_1:119575536-119588262:-|nuORF	25.57405402267927	0.3484490411150625	5				NaN	NaN	0	NaN	8291	4336	12625
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12630	35.451	NaN	1367.8	30	0	218.4	0.041	+			50141	WIRSVPIWERA	11	57	706.8890698886485	NaN	0	706.8887939453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_WIRSVPIWERA_	ENSG00000088002|ENST00000201586|SULT2B1;nc|ENSG00000088002|O00204-2|SULT2B1	36.31764250033197	0.4035636655321173	5				NaN	NaN	0	NaN	8292	4336	12625
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12641	35.475	NaN	3932.1	30	0	861.02	0.214	+			49474	VVYPPPVDP	9	59	491.7651478993102	981.5157428654204	2	491.7648010253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVYPPPVDP_	ENSG00000197601|ENST00000354817|FAR1;ENST00000524933.1_1_11:13716477-13732426:+|nuORF	42.47446043378293	0.39123495718708534	5				NaN	NaN	0	NaN	8300	4339	12640
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12642	35.479	NaN	3756.4	30	0	375.23	0.106			+	50306	WSRAARVL	8	63	479.7829979825094	957.5514430318188	2	479.7823791503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WSRAARVL_	REV__ENSG00000222009|ENST00000450269|BTBD19;REV__ENST00000482715.5_1_1:45274492-45278998:+|nuORF;REV__ENST00000485668.5_1_1:45278776-45279441:+|nuORF	58.78195531508484	0.5138399468736706	5				NaN	NaN	0	NaN	8301	4339	12640
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12643	35.481	NaN	1627.5	30	0	179.53	0.036			+	7698	DLLWTGIQY	9	62	554.7877117276935	1107.5608705221869	2	554.7875366210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DLLWTGIQY_	REV__ENSG00000164690|ENST00000297261|SHH	37.81151784470057	0.4459294069877048	5				NaN	NaN	0	NaN	8302	4339	12640
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12652	35.501	NaN	13488	30	0	2261.9	0.214				-1	 	0	78	529.2829810583728	1056.5514091835455	2	529.2820434570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8308	4342	12651
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12653	35.504	NaN	4599.9	30	0	614.97	0.106	+			7062	CTSGRHRVL	9	58	514.7749093725246	1027.535265811849	2	514.77392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_CTSGRHRVL_	ENST00000523752.5_1_8:22877945-22878461:-|nuORF	42.396135135203025	0.392153681582562	5				NaN	NaN	0	NaN	8309	4342	12651
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12654	35.506	NaN	2276.6	30	0	165.38	0.106	+			24548	LGLQNKTIS	9	60	487.287665250401	972.560777567602	2	487.2879333496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LGLQNKTIS_	ENST00000499522.6_1_8:104178449-104258641:-|nuORF	45.97224482568171	0.3502073465782774	5				NaN	NaN	0	NaN	8310	4342	12651
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12655	35.508	NaN	2315	30	0	222.54	0.106			+	43635	TIQPFLAPL	9	62	500.2954189828442	998.5762850324884	2	500.2944641113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TIQPFLAPL_	REV__ENST00000259318.7_1_9:112898482-112898686:+|nuORF	63.30626980617807	0.18605348971131092	5				NaN	NaN	0	NaN	8311	4342	12651
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12656	35.51	NaN	1774.8	30	0	207.92	0.106	+			30205	PSQPVVTEITK	11	60	599.8387246583748	1197.6628963835494	2	599.836669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PSQPVVTEITK_	ENSG00000154134|ENST00000397801|ROBO3;nc|ENSG00000154134|Q96MS0-2|ROBO3;ROBO3|p.D1059Tfs*9|1|0.29|ENSG00000154134|chr11:124878121-124878121|G/-|frameshift_variant	29.21487321580478	0.6833510030721607	5				NaN	NaN	0	NaN	8312	4342	12651
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12657	35.512	NaN	2151.4	30	0	127.84	0.106			+	-1	DMILKNSLQ	9	59	539.2821655273438	NaN	0	539.2821655273438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_DM(Oxidation (M))ILKNSLQ_	REV__ENSG00000101868|ENST00000379068|POLA1;REV__nc|ENSG00000101868|P09884|POLA1	41.42661286455405	0.26577678759562784	5				NaN	NaN	0	NaN	8313	4342	12651
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12658	35.513	NaN	1326.5	30	0	151.73	0.039	+			9992	ERKYAIEDLK	10	69	632.8478241912005	NaN	0	632.816162109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ERKYAIEDLK_	ENSG00000131018|ENST00000367255|SYNE1;ENST00000490135.6_1_6:152637953-152655276:-|nuORF;nc|ENSG00000131018|Q8NF91-4|SYNE1;nc|ENSG00000131018|Q8NF91-7|SYNE1;SYNE1|p.E4738Kfs*25|1|0.12|ENSG00000131018|chr6:152330474-152330474|T/-|frameshift_variant;SYNE1|p.E5862Gfs*83|1|0.12|ENSG00000131018|chr6:152300729-152300738|CCAGACTCCT/-|frameshift_variant;SYNE1|p.G6773Wfs*7|1|0.44|ENSG00000131018|chr6:152236186-152236187|-/A|frameshift_variant;SYNE1|p.K6871Rfs*22|2|0.52|ENSG00000131018|chr6:152233881-152233881|T/-|frameshift_variant;SYNE1|p.L8283Pfs*8|1|0.19|ENSG00000131018|chr6:152148173-152148174|-/G|frameshift_variant;SYNE1|p.M5602Nfs*13|2|0.32|ENSG00000131018|chr6:152310779-152310780|-/T|frameshift_variant;SYNE1|p.V8635Sfs*12|1|0.15|ENSG00000131018|chr6:152133375-152133375|T/-|frameshift_variant	41.42661286455405	0.3598046802465243	5				NaN	NaN	0	NaN	8314	4342	12651
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12663	35.528	NaN	4354.3	30	0	460.53	0.214	+			38567	SSFGNMIYK	9	64	523.7544797666374	1045.4944066000746	2	523.7532348632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSFGNMIYK_	ENSG00000120137|ENST00000239231|PANK3	54.776311868738084	0.25715957988447635	5				NaN	NaN	0	NaN	8316	4345	12662
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12664	35.532	NaN	2304.3	30	0	288.1	0.106				-1	CALVICLSL	9	57	496.2700989758211	990.5256450184422	2	496.2686462402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_CALVIC(Carbamidomethyl (C))LSL_	ENST00000359114.8_1_22:38087588-38087750:+|nuORF	42.47446043378293	0.39123495718708534	5				NaN	NaN	0	NaN	8317	4345	12662
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12665	35.533	NaN	1506.6	30	0	120.29	0.038			+	-1	LQESTLVIEM	10	69	610.8099975585938	NaN	0	610.8099975585938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))LQESTLVIEM(Oxidation (M))_	REV__ENSG00000029725|ENST00000537505|RABEP1;REV__ENST00000575475.2_1_17:5185712-5281605:+|nuORF;REV__nc|ENSG00000029725|Q15276-2|RABEP1;REV__RABEP1|p.R300Q|1|0.15|ENSG00000029725|chr17:5350565-5350565|G/A|missense_variant	30.317721548370564	0.4006274431774794	5				NaN	NaN	0	NaN	8318	4345	12662
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12671	35.548	NaN	7130	30	0	1097.8	0.214			+	38446	SSANIMKSKL	10	71	539.799481951239	1077.584410969278	2	539.798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSANIMKSKL_	REV__ENST00000508046.1_1_5:68609200-68609404:-|nuORF	46.45678178249821	0.4896490706773647	5				NaN	NaN	0	NaN	8321	4348	12670
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12672	35.552	NaN	2763.3	30	0	472.75	0.106			+	26895	LWTKAEELV	9	63	544.8011018545864	NaN	0	544.8012084960938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LWTKAEELV_	REV__ENSG00000160949|ENST00000409379|TONSL;REV__ENST00000497613.2_1_8:145658938-145666334:-|nuORF;REV__nc|ENSG00000160949|Q96HA7-2|TONSL	45.9519527083369	0.2345902329052062	5				NaN	NaN	0	NaN	8322	4348	12670
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12673	35.554	NaN	2191.4	30	0	186.45	0.106	+			8677	EDVQNNVQY	9	58	554.7480482256576	NaN	0	554.7482299804688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EDVQNNVQY_	tr|U7SSY8|U7SSY8_FUSNULipidAbiosynthesislauroylacyltransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01421PE=4SV=1	34.172542307311794	0.30503706118289736	5				NaN	NaN	0	NaN	8323	4348	12670
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12674	35.556	NaN	2309.5	30	0	347.84	0.106	+			24914	LKPQEQLTL	9	65	535.3177689001725	1068.620984867145	2	535.8192749023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LKPQEQLTL_	ENSG00000188573|ENST00000338333|FBLL1	36.446750945000026	0.4619375763483977	5				NaN	NaN	0	NaN	8324	4348	12670
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12675	35.558	NaN	1517.9	30	0	222.75	0.037			+	10794	FAIANQTNLR	10	58	574.3155980031077	1146.6166430730152	2	574.3147583007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FAIANQTNLR_	REV__ENSG00000206561|ENST00000383788|COLQ;REV__nc|ENSG00000206561|Q9Y215-2|COLQ;REV__nc|ENSG00000206561|Q9Y215-3|COLQ;REV__nc|ENSG00000206561|Q9Y215-4|COLQ;REV__nc|ENSG00000206561|Q9Y215-5|COLQ	35.15202426646627	0.5927656479315102	5				NaN	NaN	0	NaN	8325	4348	12670
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12683	35.576	NaN	6141.7	30	0	750.67	0.214	+			44825	TTSSTTTTTI	10	67	507.2531234204681	1012.4916939077362	2	507.25244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTSSTTTTTI_	ENSG00000173889|ENST00000495893|PHC3;ENST00000474275.5_1_3:169866840-169896704:-|nuORF;nc|ENSG00000173889|Q8NDX5-2|PHC3;nc|ENSG00000173889|Q8NDX5-3|PHC3;nc|ENSG00000173889|Q8NDX5-4|PHC3;nc|ENSG00000173889|Q8NDX5-5|PHC3;nc|ENSG00000173889|Q8NDX5-6|PHC3;nc|ENSG00000173889|Q8NDX5|PHC3;PHC3|p.Q449Sfs*2|1|0.36|ENSG00000173889|chr3:170129091-170129091|G/-|frameshift_variant;PHC3|p.T183Hfs*12|1|0.07|ENSG00000173889|chr3:170145513-170145514|-/A|frameshift_variant	64.20726635412375	0.3275756395432415	5				NaN	NaN	0	NaN	8330	4351	12682
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12684	35.579	NaN	2263.4	30	0	222.35	0.106				-1	 	0	61	494.2801257324555	986.545698531711	2	494.2779846191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8331	4351	12682
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12685	35.581	NaN	1740.1	30	0	229.85	0.106			+	-1	GDSPWLRCPL	10	51	593.2879321618948	1184.5613113905895	2	593.2864990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))GDSPWLRCPL_	REV__ENST00000482393.1_1_13:103309549-103320211:+|nuORF	34.172542307311794	0.6007644933930345	5				NaN	NaN	0	NaN	8332	4351	12682
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12686	35.583	NaN	4054.4	30	0	363.39	0.036			+	25597	LQITSNLALP	10	68	535.3177689001725	1068.620984867145	2	535.3173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LQITSNLALP_	REV__TFDP2|p.P266L|1|0.37|ENSG00000114126|chr3:141963899-141963899|G/A|missense_variant	56.632244143249146	0.3964695498866976	5				NaN	NaN	0	NaN	8333	4351	12682
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12693	35.601	NaN	10828	30	0	1126.7	0.214				-1	 	0	78	535.7624270316925	1069.5103011301849	2	535.7620849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8337	4354	12692
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12694	35.605	NaN	4853.2	30	0	1139.2	0.106				-1	 	0	53	466.2723273740227	930.5301018148455	2	466.2712707519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8338	4354	12692
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12695	35.607	NaN	4629.7	30	0	1305.7	0.106	+			20381	KESTLHLVL	9	66	520.3117494748764	1038.6089460165526	2	520.3114624023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KESTLHLVL_	ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000392399.3_1_2:137087013-137087097:-|nuORF;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;UBB|p.D191Tfs*35|2|0.18|ENSG00000170315|chr17:16382471-16382471|C/-|frameshift_variant;UBB|p.D191Tfs*35|2|0.18|ENSG00000170315|chr17:16382471-16382471|C/-|frameshift_variant	44.377184641726394	0.36891676396732553	5				NaN	NaN	0	NaN	8339	4354	12692
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12696	35.608	NaN	2423.2	30	0	505.34	0.106	+			1987	AKDLAKKEA	9	56	487.287665250401	972.560777567602	2	488.28466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AKDLAKKEA_	ENSG00000156050|ENST00000286544|FAM161B;ENST00000555916.1_1_14:74389420-74404769:-|nuORF;nc|ENSG00000156050|Q96MY7-2|FAM161B	40.77816245573522	0.41113185337114944	5				NaN	NaN	0	NaN	8340	4354	12692
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12697	35.61	NaN	1399.7	30	0	130.06	0.037			+	-1	VMCLSFMAR	9	58	573.7585112799262	1145.5024696266523	2	574.2598266601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C),2 Oxidation (M)	_VM(Oxidation (M))C(Carbamidomethyl (C))LSFM(Oxidation (M))AR_	REV__ENSG00000186231|ENST00000369261|KLHL32;REV__KLHL32|p.G405Afs*50|1|0.11|ENSG00000186231|chr6:97114365-97114365|G/-|frameshift_variant	37.15910966729921	0.4535818937225704	5				NaN	NaN	0	NaN	8341	4354	12692
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12704	35.627	NaN	2341.9	30	0	214.63	0.214	+			42989	TEKIISAEL	9	67	502.28677529264075	NaN	0	502.2875061035156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEKIISAEL_	ENSG00000073614|ENST00000399788|KDM5A;nc|ENSG00000073614|P29375-2|KDM5A	54.722347961057174	0.17414871455573902	5				NaN	NaN	0	NaN	8345	4357	12703
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12705	35.63	NaN	2356.4	30	0	777.01	0.106				-1	 	0	48	461.7723489538271	921.5301449744542	2	461.7710266113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8346	4357	12703
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12706	35.632	NaN	1670.2	30	0	232.58	0.033			+	43696	TKINGNIV	8	44	429.7564757454388	857.4983985576777	2	430.2571105957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TKINGNIV_	REV__ENSG00000130811|ENST00000253108|EIF3G;REV__ENST00000587681.5_1_19:10229095-10230535:-|nuORF;REV__ENST00000589009.5_1_19:10227257-10229639:-|nuORF	23.04248740728303	0.7814162927298575	5				NaN	NaN	0	NaN	8347	4357	12703
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12713	35.649	NaN	5395.5	30	0	620.86	0.214	+			46049	VCFLAKCPY	9	59	522.2569555458326	1042.4993581584652	2	522.2562255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VCFLAKCPY_	FAM20A|p.F316L|1|0.16|ENSG00000108950|chr17:68542146-68542146|G/T|missense_variant	40.5726180659479	0.4135428067754104	5				NaN	NaN	0	NaN	8351	4360	12712
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12714	35.652	NaN	1726.6	30	0	163.4	0.106	+			238	AAMKALQAL	9	57	458.7685839089372	915.5226148846745	2	458.767333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAMKALQAL_	ENSG00000040341|ENST00000524300|STAU2;ENST00000521451.5_1_8:74528012-74659064:-|nuORF;nc|ENSG00000040341|Q9NUL3-2|STAU2;nc|ENSG00000040341|Q9NUL3-3|STAU2;nc|ENSG00000040341|Q9NUL3-7|STAU2;nc|ENSG00000040341|Q9NUL3-8|STAU2;STAU2|p.C491Lfs*31|1|0.39|ENSG00000040341|chr8:73552072-73552073|-/G|frameshift_variant;STAU2|p.K274Nfs*22|1|0.09|ENSG00000040341|chr8:73613813-73613813|T/-|frameshift_variant;STAU2|p.K410Ifs*9|1|0.07|ENSG00000040341|chr8:73552313-73552314|-/A|frameshift_variant;STAU2|p.L259Tfs*15|2|0.48|ENSG00000040341|chr8:73613860-73613861|-/T|frameshift_variant	49.44154591367651	0.3095138337212152	5				NaN	NaN	0	NaN	8352	4360	12712
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12715	35.654	NaN	2172.3	30	0	102.59	0.036	+			51372	YTIGKEIID	9	64	526.2870873618607	1050.5596217905213	2	526.2865600585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YTIGKEIID_	ENSG00000123416|ENST00000336023|TUBA1B;ENSG00000127824|ENST00000248437|TUBA4A;ENSG00000167552|ENST00000301071|TUBA1A;ENSG00000167553|ENST00000301072|TUBA1C;ENST00000462806.5_1_2:220116196-220118580:-|nuORF;ENST00000530835.1_1_11:90015825-90016947:+|nuORF;ENST00000548363.1_1_12:49580068-49582762:-|nuORF;ENST00000550254.1_1_12:49580068-49580335:-|nuORF;nc|ENSG00000127824|P68366-2|TUBA4A;nc|ENSG00000167552|Q71U36-2|TUBA1A;TUBA4A|p.V182Gfs*32|1|0.04|ENSG00000127824|chr2:219251156-219251157|-/TACACCA|frameshift_variant	54.776311868738084	0.25715957988447635	5				NaN	NaN	0	NaN	8353	4360	12712
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12723	35.674	NaN	1918.5	30	0	130.11	0.144	+			2229	ALSFIHHQV	9	64	526.2870873618607	1050.5596217905213	2	526.2859497070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ALSFIHHQV_	ENSG00000086015|ENST00000361297|MAST2;ENST00000482881.1_1_1:46425082-46476635:+|nuORF;MAST2|p.R1274Dfs*9|1|0.49|ENSG00000086015|chr1:46034213-46034213|C/-|frameshift_variant	47.657333605630114	0.33044192980041115	5				NaN	NaN	0	NaN	8358	4363	12722
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12729	35.692	NaN	1506.6	30	0	122.21	0.214			+	26557	LTSLFLGGAAL	11	62	531.8129246171973	1061.6112963011944	2	531.8118286132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LTSLFLGGAAL_	REV__ENSG00000179873|ENST00000589093|NLRP11;REV__nc|ENSG00000179873|P59045-2|NLRP11;REV__nc|ENSG00000179873|P59045-3|NLRP11;REV__NLRP11|p.N817Ifs*7|1|0.4|ENSG00000179873|chr19:55792364-55792364|T/-|frameshift_variant	44.116797842482775	0.5016126852448448	5				NaN	NaN	0	NaN	8361	4366	12728
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12730	35.696	NaN	1266.9	30	0	96.604	0.106			+	-1	MTCAWSIVL	9	58	548.7618415413289	1095.5091301494576	2	548.76025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))TC(Carbamidomethyl (C))AWSIVL_	REV__ENST00000255078.7_1_11:68673703-68675675:+|nuORF	30.503639358989545	0.5181749237905803	5				NaN	NaN	0	NaN	8362	4366	12728
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12731	35.698	NaN	1303.3	30	0	355.83	0.106				-1	 	0	46	484.7992333014147	967.5839136696294	2	485.2991638183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8363	4366	12728
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12732	35.699	NaN	581.08	30	0	82.638	0.032				-1	 	0	34	412.8028329434028	823.5911129536056	2	412.802001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8364	4366	12728
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12740	35.718	NaN	3388.5	30	0	1093.8	0.214				-1	 	0	40	337.57118406706024	1009.6917228013808	3	337.5704650878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8369	4369	12739
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12741	35.721	NaN	3239.4	30	0	179.44	0.106				-1	 	0	65	505.8532573673879	1009.6919618015759	2	505.85205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8370	4369	12739
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12742	35.723	NaN	1621.8	30	0	108.81	0.106	+			34950	SAAKLLTEY	9	56	498.2753975100364	994.5362420868728	2	498.2738952636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAAKLLTEY_	ENSG00000189221|ENST00000338702|MAOA;MAOA|p.G405Afs*12|1|0.26|ENSG00000189221|chrX:43741995-43741995|G/-|frameshift_variant	45.97224482568171	0.3502073465782774	5				NaN	NaN	0	NaN	8371	4369	12739
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12743	35.725	NaN	2729.1	30	0	199.46	0.106	+			10456	EVNKFQMAY	9	68	565.2715622729131	1128.5285716126261	2	565.2717895507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EVNKFQMAY_	ENSG00000140319|ENST00000267884|SRP14	79.45101966838831	0.09992237243120712	5				NaN	NaN	0	NaN	8372	4369	12739
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12744	35.727	NaN	2026.4	30	0	281.01	0.106	+			24338	LFLCRMQL	8	62	512.278016649186	1022.5414803651721	2	512.276611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LFLCRMQL_	ENSG00000183317|ENST00000373048|EPHA10;EPHA10|p.R869Gfs*10|1|0.12|ENSG00000183317|chr1:37719566-37719566|G/-|frameshift_variant;nc|ENSG00000183317|Q5JZY3-2|EPHA10;nc|ENSG00000183317|Q5JZY3-3|EPHA10	47.91560031466742	0.6071945918984287	5				NaN	NaN	0	NaN	8373	4369	12739
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12745	35.729	NaN	1252.5	30	0	138.66	0.106				-1	LNTSDFSLTG	10	56	548.7618415413289	1095.5091301494576	2	548.8222045898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LNTSDFSLTG_	ENST00000511739.1_1_4:144133549-144134759:+|nuORF	35.61828744233558	0.588957954432594	5				NaN	NaN	0	NaN	8374	4369	12739
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12746	35.73	NaN	2663.7	30	0	331.53	0.034			+	15999	HAPAPTTRL	9	49	482.27107061829435	962.5275883033887	2	482.2700500488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HAPAPTTRL_	REV__ENST00000590454.2_1_19:900936-902165:-|nuORF	38.80614096846853	0.43426287593479557	5				NaN	NaN	0	NaN	8375	4369	12739
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12759	35.758	NaN	6706.1	30	0	4945.4	0.214			+	50106	WGRWWFWLERR	11	60	559.9560362393195	1676.8462793181584	3	559.95556640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WGRWWFWLERR_	REV__ENST00000246635.7_1_17:39661629-39661743:-|nuORF	0	0.9074864536995126	5				NaN	NaN	0	NaN	8385	4372	12758
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12760	35.761	NaN	2022.5	30	0	325.31	0.106	+			7644	DKNITLLH	8	57	477.2755563434726	952.5365597537452	2	477.27410888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DKNITLLH_	DAAM1|p.E1001Dfs*18|1|0.08|ENSG00000100592|chr14:59367574-59367575|-/TGGTTTTAAG|frameshift_variant;ENSG00000100592|ENST00000360909|DAAM1;ENST00000553966.5_1_14:59814299-59830444:+|nuORF;nc|ENSG00000100592|Q9Y4D1-3|DAAM1;nc|ENSG00000100592|Q9Y4D1|DAAM1	87.75429964447693	0.2842685068779738	5				NaN	NaN	0	NaN	8386	4372	12758
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12761	35.763	NaN	3618.2	30	0	550.78	0.106			+	-1	YVCYFFSL	8	64	549.751003049056	1097.4874531649118	2	550.2515258789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_YVC(Carbamidomethyl (C))YFFSL_	REV__L1PA3_dup1321|chr2:173527290-173533317:-|1.892281258594111|0.2637255971055219|2.84|482.0|331|3|anti-sense	28.2542754592877	0.7411748056684583	5				NaN	NaN	0	NaN	8387	4372	12758
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12762	35.765	NaN	1253.3	30	0	93.418	0.106	+			27048	MAAPAQPKK	9	51	471.26615078669516	940.5177486401903	2	471.2649230957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MAAPAQPKK_	AQR|p.F41Lfs*3|1|0.13|ENSG00000021776|chr15:34964243-34964243|A/-|frameshift_variant;AQR|p.K1234Sfs*17|1|0.35|ENSG00000021776|chr15:34870819-34870819|T/-|frameshift_variant;AQR|p.K759Rfs*19|1|0.27|ENSG00000021776|chr15:34897678-34897678|T/-|frameshift_variant;ENSG00000021776|ENST00000156471|AQR	30.503639358989545	0.5181749237905803	5				NaN	NaN	0	NaN	8388	4372	12758
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12763	35.767	NaN	1073.8	30	0	252.11	0.04				-1	CLVHHDHTYSL	11	49	691.3172719826005	1380.6199910320008	2	691.31689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_C(Carbamidomethyl (C))LVHHDHTYSL_	ENSG00000107175|ENST00000353704|CREB3;ENST00000486056.1_1_9:35732760-35733244:+|nuORF;nc|ENSG00000107175|O43889-3|CREB3	19.996771675451527	0.7768568223548057	5				NaN	NaN	0	NaN	8389	4372	12758
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12771	35.785	NaN	7077.5	30	0	1385	0.215				-1	VYTRQSMAK	9	71	550.2810163097294	1098.5474796862586	2	550.2805786132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_VYTRQSM(Oxidation (M))AK_	CUL1|p.L446Ifs*3|1|0.4|ENSG00000055130|chr7:148786586-148786589|CACT/-|frameshift_variant;CUL1|p.Y377Ifs*12|1|0.28|ENSG00000055130|chr7:148783821-148783822|-/A|frameshift_variant;ENSG00000055130|ENST00000325222|CUL1	56.72105179125745	0.24094814563026265	5				NaN	NaN	0	NaN	8394	4375	12770
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12772	35.789	NaN	1859.4	30	0	278.6	0.106	+			27436	MLGQTPTKE	9	57	502.75694453189834	1003.4993361305967	2	502.75567626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MLGQTPTKE_	ENSG00000101470|ENST00000372555|TNNC2	45.97224482568171	0.3502073465782774	5				NaN	NaN	0	NaN	8395	4375	12770
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12773	35.791	NaN	2299.3	30	0	178.48	0.106				-1	 	0	51	422.26947876921423	842.5244046052285	2	422.2689514160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8396	4375	12770
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12774	35.792	NaN	1399.3	30	0	165.71	0.106				-1	 	0	52	488.81432475638434	975.6140965795687	2	488.8130798339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8397	4375	12770
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12775	35.794	NaN	1425	30	0	228.41	0.041			+	-1	HPYCILQLLKQ	11	66	706.8890698886485	NaN	0	706.8890380859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_HPYC(Carbamidomethyl (C))ILQLLKQ_	REV__ENSG00000144893|ENST00000687756|MED12L;REV__MED12L|p.L1417Sfs*14|1|0.06|ENSG00000144893|chr3:151378044-151378044|C/-|frameshift_variant;REV__MED12L|p.N1494Rfs*10|1|0.1|ENSG00000144893|chr3:151380219-151380220|-/GAAATAATGCATT|frameshift_variant;REV__MED12L|p.T1760Pfs*44|1|0.42|ENSG00000144893|chr3:151388100-151388100|A/-|frameshift_variant;REV__nc|ENSG00000144893|Q86YW9-4|MED12L;REV__nc|ENSG00000144893|Q86YW9|MED12L	19.996771675451527	0.456735970842152	5				NaN	NaN	0	NaN	8398	4375	12770
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12782	35.812	NaN	2930.7	30	0	196.02	0.214	+			15856	GYFGNPQKF	9	65	529.2595568704154	1056.5045608076307	2	529.2588500976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GYFGNPQKF_	ENSG00000053747|ENST00000313654|LAMA3;LAMA3|p.E2016Rfs*13|1|0.27|ENSG00000053747|chr18:23901164-23901164|G/-|frameshift_variant;LAMA3|p.T2580Hfs*68|1|0.55|ENSG00000053747|chr18:23915376-23915376|A/-|frameshift_variant;nc|ENSG00000053747|Q16787-1|LAMA3;nc|ENSG00000053747|Q16787-3|LAMA3;nc|ENSG00000053747|Q16787-4|LAMA3	90.77665401227738	0.06267569666681755	5				NaN	NaN	0	NaN	8402	4378	12781
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12783	35.816	NaN	2055.5	30	0	182.27	0.106	+			36022	SEIFHSQSF	9	62	541.2523352070772	1080.4901174809543	2	541.7542114257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEIFHSQSF_	ENSG00000186522|ENST00000397712|SEPTIN10;ENST00000517342.1_1_8:57389388-57389772:-|nuORF;nc|ENSG00000186522|Q9P0V9-2|SEPTIN10;nc|ENSG00000186522|Q9P0V9-3|SEPTIN10	39.252832667884924	0.4290233611298554	5				NaN	NaN	0	NaN	8403	4378	12781
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12784	35.818	NaN	1224.5	30	0	116.53	0.106			+	30416	PWLYSQGGCP	10	59	554.2507795297192	1106.4870061262384	2	554.251220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PWLYSQGGCP_	REV__nc|ENSG00000013573|Q96FC9|DDX11	27.882242232435846	0.6521336255503853	5				NaN	NaN	0	NaN	8404	4378	12781
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12785	35.82	NaN	1457	30	0	181.85	0.035	+			31329	QIQRYAPR	8	52	516.2897427142364	NaN	0	516.290771484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QIQRYAPR_	ENSG00000036672|ENST00000260187|USP2;ENST00000525189.5_1_11:119229939-119230923:-|nuORF;ENST00000532613.1_1_11:119229420-119234603:-|nuORF;nc|ENSG00000036672|O75604-2|USP2;nc|ENSG00000036672|O75604-3|USP2;nc|ENSG00000036672|O75604-4|USP2	38.80614096846853	1.7418937515398478	5				NaN	NaN	0	NaN	8405	4378	12781
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12793	35.838	NaN	4296.3	30	0	646.24	0.214	+			35956	SEGPLRPVL	9	62	484.2829578072417	966.5513626812834	2	484.2817687988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEGPLRPVL_	ENSG00000112200|ENST00000370706|ZNF451;ENST00000444273.6_1_6:56954967-57015704:+|nuORF;nc|ENSG00000112200|Q9Y4E5-2|ZNF451;nc|ENSG00000112200|Q9Y4E5-4|ZNF451;ZNF451|p.K220Nfs*85|1|0.34|ENSG00000112200|chr6:57134823-57134823|A/-|frameshift_variant;ZNF451|p.L304Dfs*12|1|0.07|ENSG00000112200|chr6:57141999-57142000|TT/-|frameshift_variant;ZNF451|p.T701Nfs*2|1|0.1|ENSG00000112200|chr6:57148180-57148181|-/A|frameshift_variant	40.77816245573522	0.41113185337114944	5				NaN	NaN	0	NaN	8410	4381	12792
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12794	35.842	NaN	2988.2	30	0	290.11	0.106			+	-1	LASLICCDTK	10	68	590.7880245060925	1179.5614960789849	2	590.7868041992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_LASLIC(Carbamidomethyl (C))C(Carbamidomethyl (C))DTK_	REV__CFAP54|p.Q2612Rfs*5|1|0.32|ENSG00000188596|chr12:96753887-96753887|T/-|frameshift_variant;REV__ENSG00000188596|ENST00000524981|CFAP54;REV__ENST00000342887.1_1_12:97043703-97159031:+|nuORF;REV__nc|ENSG00000188596|Q96N23-2|CFAP54	37.81151784470057	0.569310847604193	5				NaN	NaN	0	NaN	8411	4381	12792
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12795	35.844	NaN	3049.1	30	0	348.81	0.106	+			47958	VSMLNVYLK	9	67	541.7994379520715	NaN	0	541.7987060546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_VSM(Oxidation (M))LNVYLK_	ENSG00000111775|ENST00000229379|COX6A1;ENST00000550009.1_1_12:120875908-120876378:+|nuORF	45.97224482568171	0.23445038899310136	5				NaN	NaN	0	NaN	8412	4381	12792
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12796	35.846	NaN	1731.1	30	0	190.78	0.036	+			8594	ECEDIKKIL	9	60	545.7951795997611	1089.5758062663222	2	545.7947387695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ECEDIKKIL_	ENSG00000118557|ENST00000237353|PMFBP1;nc|ENSG00000118557|Q8TBY8-1|PMFBP1;nc|ENSG00000118557|Q8TBY8-3|PMFBP1;nc|ENSG00000118557|Q8TBY8-4|PMFBP1;PMFBP1|p.K427Rfs*17|1|0.45|ENSG00000118557|chr16:72132915-72132915|T/-|frameshift_variant	36.446750945000026	0.4619375763483977	5				NaN	NaN	0	NaN	8413	4381	12792
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12804	35.864	NaN	2519.2	30	0	253.02	0.214	+			7601	DIWVIVLI	8	52	485.80176929334624	969.5889856534925	2	485.8001708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DIWVIVLI_	ENSG00000256235|ENST00000526627|SMIM3	28.2542754592877	0.7411748056684583	5				NaN	NaN	0	NaN	8418	4384	12803
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12805	35.868	NaN	1931.6	30	0	246.64	0.106				-1	 	0	41	407.7561613310153	813.4977697288306	2	407.7550964355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8419	4384	12803
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12806	35.87	NaN	1956.6	30	0	107.56	0.106	+			11381	FLLKPQNY	8	60	511.7844330975743	NaN	0	511.7848205566406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FLLKPQNY_	ADGRL4|p.M380Rfs*18|1|0.04|ENSG00000162618|chr1:78921731-78921732|-/TATTTATAAATGTTGCTTTTTC|frameshift_variant;ENSG00000162618|ENST00000370742|ADGRL4	54.76467175910256	1.7418937515398478	5				NaN	NaN	0	NaN	8420	4384	12803
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12807	35.871	NaN	1521.5	30	0	225.43	0.106	+			26185	LSRPPGPSL	9	49	462.2695535628369	922.5245541924738	2	462.2682189941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSRPPGPSL_	AUTS2|p.H1148Tfs*70|1|0.36|ENSG00000158321|chr7:70790657-70790657|C/-|frameshift_variant;ENSG00000158321|ENST00000342771|AUTS2;nc|ENSG00000158321|Q8WXX7-2|AUTS2;nc|ENSG00000158321|Q8WXX7-5|AUTS2	24.519189625965996	0.574102787014149	5				NaN	NaN	0	NaN	8421	4384	12803
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12808	35.873	NaN	1857.4	30	0	336.74	0.106			+	44009	TPIINPQPK	9	33	336.5342235908448	NaN	0	336.5341491699219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TPIINPQPK_	REV__ENSG00000025796|ENST00000369002|SEC63	23.04248740728303	0.3589936788096251	5				NaN	NaN	0	NaN	8422	4384	12803
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12809	35.875	NaN	1826.7	30	0	108.58	0.036	+			18014	IIHAVIQEY	9	67	543.3019962848332	1084.5894396364663	2	543.3035888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IIHAVIQEY_	ENSG00000067167|ENST00000262213|TRAM1;nc|ENSG00000067167|Q15629-2|TRAM1	37.15910966729921	0.4535818937225704	5				NaN	NaN	0	NaN	8423	4384	12803
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12815	35.891	NaN	2856.7	30	0	575.25	0.214	+			49583	VYERELQTF	9	67	592.8019910777292	1183.5894292222583	2	593.3027954101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYERELQTF_	ENSG00000203791|ENST00000368836|EEF1AKMT2	66.96192283764107	0.15557981141143568	5				NaN	NaN	0	NaN	8426	4387	12814
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12816	35.895	NaN	1370.9	30	0	190.37	0.036	+			31138	QGEITSSNQL	10	58	538.7653198242188	NaN	0	538.7653198242188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QGEITSSNQL_	ENST00000196371.9_1_5:41731180-41731306:-|nuORF	40.05817265558897	0.3684561582319974	5				NaN	NaN	0	NaN	8427	4387	12814
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12822	35.911	NaN	3171	30	0	352	0.214	+			51329	YSLVSREL	8	58	483.76728152997583	965.5200101267517	2	483.765869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YSLVSREL_	ENSG00000119777|ENST00000238788|TMEM214	87.69643885390035	0.28444366722805053	5				NaN	NaN	0	NaN	8430	4390	12821
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12823	35.915	NaN	4447.1	30	0	744.96	0.106				-1	 	0	69	523.2751550691653	1044.5357572051305	2	523.2744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8431	4390	12821
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12824	35.916	NaN	2149.7	30	0	335.98	0.106	+			32636	QYTQALEKF	9	58	564.2910184524466	1126.567483971693	2	564.2904052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QYTQALEKF_	ASAP2|p.H548Qfs*57|1|0.14|ENSG00000151693|chr2:9374842-9374842|C/-|frameshift_variant;ASAP2|p.L787Afs*16|1|0.31|ENSG00000151693|chr2:9388513-9388514|-/C|frameshift_variant;ENSG00000151693|ENST00000281419|ASAP2;nc|ENSG00000151693|O43150-2|ASAP2	52.936696900407355	0.27249468807391813	5				NaN	NaN	0	NaN	8432	4390	12821
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12825	35.918	NaN	3320.6	30	0	674.12	0.106				-1	LATLCMVIF	9	62	542.2836247530172	1082.5526965728343	2	542.2827758789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_LATLC(Carbamidomethyl (C))M(Oxidation (M))VIF_	tr|U7T235|U7T235_FUSNUYidE/YbjLduplicationdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00532PE=3SV=1	50.0245360154114	0.3026755932229825	5				NaN	NaN	0	NaN	8433	4390	12821
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12826	35.92	NaN	1027.1	30	0	166.19	0.033			+	6084	AVNEVMKL	8	38	452.2514793793212	NaN	0	452.2512512207031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVNEVMKL_	REV__SETD1A|p.R812L|1|0.31|ENSG00000099381|chr16:30966316-30966316|G/T|missense_variant	51.33545320467046	1.7418937515398478	5				NaN	NaN	0	NaN	8434	4390	12821
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12833	35.937	NaN	2047	30	0	200.62	0.214				-1	 	0	61	494.2801257324555	986.545698531711	2	494.279052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8438	4393	12832
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12834	35.94	NaN	1382.1	30	0	165.18	0.106	+			12945	GESSLIKQL	9	45	487.7806337662681	973.5467145993363	2	487.77899169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GESSLIKQL_	ARID2|p.N1778Ifs*13|1|0.15|ENSG00000189079|chr12:45893686-45893686|A/-|frameshift_variant;ENSG00000189079|ENST00000334344|ARID2;nc|ENSG00000189079|Q68CP9-3|ARID2	58.22992032128504	0.22837015374068087	5				NaN	NaN	0	NaN	8439	4393	12832
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12835	35.942	NaN	2150.2	30	0	361.35	0.106				-1	MGKEKTHIN	9	68	550.2810163097294	1098.5474796862586	2	550.2803955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))MGKEKTHIN_	EEF1A1|p.P263Lfs*27|1|0.36|ENSG00000156508|chr6:73518595-73518595|G/-|frameshift_variant;EEF1A2|p.T239Hfs*50|1|0.26|ENSG00000101210|chr20:63493194-63493195|-/G|frameshift_variant;EEF1A2|p.T239Rfs*40|1|0.31|ENSG00000101210|chr20:63493195-63493195|G/-|frameshift_variant;ENSG00000101210|ENST00000217182|EEF1A2;ENSG00000156508|ENST00000309268|EEF1A1;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	42.396135135203025	0.392153681582562	5				NaN	NaN	0	NaN	8440	4393	12832
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12836	35.944	NaN	1834.7	30	0	137.65	0.036			+	-1	GKQCSAEQY	9	61	535.7299425505649	1069.4453321679298	2	535.728271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_GKQC(Carbamidomethyl (C))SAEQY_	REV__ENST00000508853.1_1_5:38151970-38152237:+|nuORF	39.252832667884924	0.4290233611298554	5				NaN	NaN	0	NaN	8441	4393	12832
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12841	35.958	NaN	4743.4	30	0	1197.4	0.214	+			20382	KESTLHLVL	9	61	520.3117494748764	1038.6089460165526	2	520.3114624023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KESTLHLVL_	ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000392399.3_1_2:137087013-137087097:-|nuORF;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;UBB|p.D191Tfs*35|2|0.18|ENSG00000170315|chr17:16382471-16382471|C/-|frameshift_variant;UBB|p.D191Tfs*35|2|0.18|ENSG00000170315|chr17:16382471-16382471|C/-|frameshift_variant	40.05817265558897	0.419577045485086	5				NaN	NaN	0	NaN	8443	4396	12840
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12842	35.962	NaN	2503.3	30	0	625.18	0.106				-1	PHLLSGSSC	9	59	479.2281091195618	956.4416653059236	2	479.2265319824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_PHLLSGSSC(Carbamidomethyl (C))_	ENSG00000112837|ENST00000369663|TBX18;TBX18|p.K539Nfs*25|1|0.15|ENSG00000112837|chr6:84736895-84736895|G/-|frameshift_variant	42.47446043378293	0.39123495718708534	5				NaN	NaN	0	NaN	8444	4396	12840
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12843	35.964	NaN	1376.8	30	0	91.672	0.106	+			25570	LQDPVQSSTPE	11	53	600.7914084869257	1199.5682640406512	2	600.790283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LQDPVQSSTPE_	ENSG00000166261|ENST00000530393|ZNF202	32.75053402867276	0.6462648045997152	5				NaN	NaN	0	NaN	8445	4396	12840
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12844	35.966	NaN	2625.8	30	0	160.39	0.038	+			18066	IKDKNSFPLF	10	70	604.8365521907803	1207.6585514483604	2	605.3383178710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IKDKNSFPLF_	RICTOR|p.F1087L|1|0.37|ENSG00000164327|chr5:38950587-38950587|G/T|missense_variant	50.033510581677724	0.4566913063131936	5				NaN	NaN	0	NaN	8446	4396	12840
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12852	35.984	NaN	5205.3	30	0	687.43	0.214				-1	 	0	68	506.7593526305092	1011.5041523278185	2	506.7583312988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8451	4399	12851
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12853	35.988	NaN	5045.8	30	0	390	0.106			+	-1	ALRYLTSM	8	70	485.75445360882173	969.4943542844435	2	485.7527770996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_ALRYLTSM(Oxidation (M))_	REV__ENSG00000174231|ENST00000304992|PRPF8;REV__PRPF8|p.D1670Tfs*23|1|0.29|ENSG00000174231|chr17:1659487-1659487|C/-|frameshift_variant	79.9392285194092	0.32408006123154964	5				NaN	NaN	0	NaN	8452	4399	12851
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12854	35.99	NaN	2487.9	30	0	245.24	0.106	+			18358	IQNGLILFQY	10	71	604.8365521907803	1207.6585514483604	2	604.835693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IQNGLILFQY_	ENST00000366481.3_1_1:248040148-248040412:+|nuORF	46.45678178249821	0.4896490706773647	5				NaN	NaN	0	NaN	8453	4399	12851
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12855	35.992	NaN	4391.4	30	0	624.66	0.106			+	-1	IMIGQPLDK	9	60	515.7829619718608	1029.5513710105215	2	515.781982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_IM(Oxidation (M))IGQPLDK_	REV__ENST00000374409.5_1_1:24696302-24700215:-|nuORF	31.529811441608018	0.5085848003137583	5				NaN	NaN	0	NaN	8454	4399	12851
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12856	35.993	NaN	2047.6	30	0	173.46	0.106				-1	 	0	60	535.7624270316925	1069.5103011301849	2	535.7605590820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8455	4399	12851
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12857	35.995	NaN	2229.6	30	0	361.29	0.035			+	14108	GSLMLKVVQ	9	65	495.7856602541864	989.5567675751728	2	496.28387451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_GSLM(Oxidation (M))LKVVQ_	REV__ENST00000491277.1_1_1:214705434-214705560:-|nuORF	66.42927471994793	0.16001998865088202	5				NaN	NaN	0	NaN	8456	4399	12851
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12865	36.015	NaN	2909.6	30	0	416.9	0.214	+			4583	ATLGAILNR	9	54	464.7827864428178	927.5510199524356	2	464.7818908691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATLGAILNR_	ENSG00000156515|ENST00000359426|HK1;ENST00000494253.1_1_10:71098016-71144300:+|nuORF;HK1|p.R398H|1|0.04|ENSG00000156515|chr10:69380023-69380023|G/A|missense_variant;nc|ENSG00000156515|P19367-2|HK1;nc|ENSG00000156515|P19367-3|HK1;nc|ENSG00000156515|P19367-4|HK1	110.11987700582712	0.028875675806141952	5				NaN	NaN	0	NaN	8461	4402	12864
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12866	36.019	NaN	2166.9	30	0	425.53	0.106			+	14109	GSLMLKVVQ	9	51	495.7856602541864	989.5567675751728	2	495.7844543457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_GSLM(Oxidation (M))LKVVQ_	REV__ENST00000491277.1_1_1:214705434-214705560:-|nuORF	45.97224482568171	0.3502073465782774	5				NaN	NaN	0	NaN	8462	4402	12864
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12867	36.021	NaN	1750.4	30	0	157.65	0.106				-1	 	0	62	534.2617980251788	533.2545215585787	1	534.2642822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8463	4402	12864
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12868	36.022	NaN	3120	30	0	288.52	0.106				-1	 	0	64	546.309397286324	1090.604241639448	2	546.3065795898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8464	4402	12864
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12869	36.024	NaN	1685.7	30	0	206.56	0.106			+	9727	EMVHIQLTD	9	64	551.2646312702362	1100.5147096072724	2	551.7647705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_EM(Oxidation (M))VHIQLTD_	REV__ENSG00000269335|ENST00000594239|IKBKG;REV__nc|ENSG00000269335|Q9Y6K9-2|IKBKG;REV__nc|ENSG00000269335|Q9Y6K9-3|IKBKG	60.11826168202944	0.21262886028301267	5				NaN	NaN	0	NaN	8465	4402	12864
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12870	36.026	NaN	1780.1	30	0	312.72	0.038			+	27040	LYYFEPILE	9	58	593.8046042491037	1185.5946555650073	2	593.8040771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LYYFEPILE_	REV__ENSG00000172915|ENST00000379939|NBEA;REV__ENSG00000198589|ENST00000651943|LRBA;REV__ENST00000503716.5_1_4:151186876-151502511:-|nuORF;REV__LRBA|p.L2590*|1|0.41|ENSG00000198589|chr4:150310342-150310342|A/-|frameshift_variant;REV__nc|ENSG00000172915|Q8NFP9-3|NBEA;REV__nc|ENSG00000172915|Q8NFP9|NBEA;REV__nc|ENSG00000198589|P50851-2|LRBA;REV__nc|ENSG00000198589|P50851|LRBA	33.51558372728122	0.4900267029546261	5				NaN	NaN	0	NaN	8466	4402	12864
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12876	36.041	NaN	1654	30	0	203.41	0.214			+	45010	TVEVTLNY	8	59	469.744739028323	NaN	0	469.7451171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVEVTLNY_	REV__ENSG00000086570|ENST00000261800|FAT2;REV__FAT2|p.D4043Tfs*8|1|0.1|ENSG00000086570|chr5:151507544-151507544|C/-|frameshift_variant;REV__FAT2|p.P2377Qfs*41|1|0.34|ENSG00000086570|chr5:151543997-151543997|G/-|frameshift_variant;REV__FAT2|p.S1414L|1|0.26|ENSG00000086570|chr5:151551522-151551522|G/A|missense_variant;REV__FAT2|p.V3716Ffs*44|1|0.22|ENSG00000086570|chr5:151521447-151521447|C/-|frameshift_variant;REV__FAT2|p.Y3462Tfs*16|1|0.37|ENSG00000086570|chr5:151525891-151525891|G/-|frameshift_variant	49.44154591367651	1.7418937515398478	5				NaN	NaN	0	NaN	8469	4405	12875
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12877	36.044	NaN	1710.3	30	0	528.56	0.106			+	755	AEEEHLEQV	9	33	361.83432622233954	NaN	0	361.83428955078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEEEHLEQV_	REV__ENSG00000135837|ENST00000367607|CEP350	35.61828744233558	0.29773779453147337	5				NaN	NaN	0	NaN	8470	4405	12875
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12878	36.046	NaN	2731.8	30	0	310.38	0.106				-1	DAFSRMPLM	9	61	542.2489524548438	NaN	0	542.2489624023438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_DAFSRMPLM(Oxidation (M))_	ENSG00000055609|ENST00000262189|KMT2C;KMT2C|p.F4496Lfs*21|3|0.28|ENSG00000055609|chr7:152148439-152148439|A/-|frameshift_variant;KMT2C|p.I4868Lfs*37|1|0.28|ENSG00000055609|chr7:152138837-152138837|T/-|frameshift_variant;KMT2C|p.K2867Dfs*7|1|0.28|ENSG00000055609|chr7:152176853-152176854|TT/-|frameshift_variant;KMT2C|p.P2292Hfs*13|1|0.25|ENSG00000055609|chr7:152180985-152180985|G/-|frameshift_variant;KMT2C|p.S2816Ifs*6|1|0.44|ENSG00000055609|chr7:152177007-152177008|-/T|frameshift_variant;KMT2C|p.T3715Qfs*4|1|0.34|ENSG00000055609|chr7:152162434-152162434|T/-|frameshift_variant;nc|ENSG00000055609|Q8NEZ4-2|KMT2C;nc|ENSG00000055609|Q8NEZ4-3|KMT2C	47.91560031466742	0.22105767942158736	5				NaN	NaN	0	NaN	8471	4405	12875
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12879	36.048	NaN	2329.4	30	0	1164.2	0.106			+	46074	VCPRSQAPV	9	50	478.74999783142647	NaN	0	478.75054931640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VCPRSQAPV_	REV__ENSG00000243449|ENST00000409248|C4orf48;REV__nc|ENSG00000243449|Q5BLP8-2|NICOL1;REV__nc|ENSG00000243449|Q5BLP8-3|NICOL1	40.77816245573522	0.2702456086868081	5				NaN	NaN	0	NaN	8472	4405	12875
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12880	36.05	NaN	1533.1	30	0	153.71	0.106			+	-1	AEKFMSPEI	9	35	356.50857444492	1066.50389393496	3	356.50885009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_AEKFM(Oxidation (M))SPEI_	REV__RYR2|p.V1850M|1|0.4|ENSG00000198626|chr1:237614676-237614676|G/A|missense_variant	25.57405402267927	0.5642445186134241	5				NaN	NaN	0	NaN	8473	4405	12875
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12881	36.052	NaN	1000.4	30	0	213.74	0.106	+			15980	HAIPPTLAM	9	52	475.75909284809035	NaN	0	475.759765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HAIPPTLAM_	ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1	30.503639358989545	0.3235605894931338	5				NaN	NaN	0	NaN	8474	4405	12875
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12882	36.054	NaN	2124.2	30	0	622.99	0.036			+	8005	DTKCLQPPGD	10	49	537.2505968125857	1072.4866406919714	2	537.2509155273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DTKCLQPPGD_	REV__DIP2B|p.A1021Cfs*11|1|0.32|ENSG00000066084|chr12:50721279-50721280|-/CTGTATGCAC|frameshift_variant;REV__DIP2B|p.I979Afs*17|1|0.13|ENSG00000066084|chr12:50718790-50718815|AAATAGAAGAGAATGATTTGGTGAGG/-|frameshift_variant;REV__DIP2B|p.V1240Dfs*9|1|0.05|ENSG00000066084|chr12:50731445-50731446|-/ATATTTAC|frameshift_variant;REV__DIP2B|p.V893Gfs*91|1|0.06|ENSG00000066084|chr12:50714417-50714418|-/G|frameshift_variant;REV__ENSG00000066084|ENST00000301180|DIP2B	35.15202426646627	0.5927656479315102	5				NaN	NaN	0	NaN	8475	4405	12875
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12890	36.072	NaN	3894.2	30	0	795.38	0.214	+			45573	TYMGHTGAVW	10	68	561.7562578223627	1121.4979627115254	2	561.7554321289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TYMGHTGAVW_	ENSG00000084623|ENST00000677711|EIF3I;ENST00000474371.1_1_1:32688150-32694122:+|nuORF;ENST00000489353.5_1_1:32688042-32691823:+|nuORF	47.657333605630114	0.47858658696240314	5				NaN	NaN	0	NaN	8480	4408	12889
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12891	36.075	NaN	6540.3	30	0	697.26	0.106			+	-1	ALIVAPSPGM	10	74	486.2645327194395	970.514512505679	2	486.2623596191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_ALIVAPSPGM(Oxidation (M))_	REV__ENST00000454552.5_3_22:30812353-30824658:+|nuORF	30.503639358989545	0.6307262373768582	5				NaN	NaN	0	NaN	8481	4408	12889
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12892	36.077	NaN	2211.6	30	0	198.18	0.106	+			225	AALSYVLCK	9	53	512.7800144122801	1023.5454758913603	2	512.7787475585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_AALSYVLC(Carbamidomethyl (C))K_	ENSG00000161921|ENST00000293778|CXCL16	47.657333605630114	0.33044192980041115	5				NaN	NaN	0	NaN	8482	4408	12889
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12893	36.079	NaN	1917.2	30	0	370.12	0.106			+	-1	YLELMVDR	8	60	527.7659354455955	1053.5173179579908	2	527.7654418945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_YLELM(Oxidation (M))VDR_	REV__ENSG00000105497|ENST00000262259|ZNF175	53.351449002276354	0.5676011784961348	5				NaN	NaN	0	NaN	8483	4408	12889
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12894	36.081	NaN	2685.6	30	0	601.84	0.106				-1	MPSERSECR	9	59	555.7364104052299	1109.4582678772597	2	555.7357788085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_M(Oxidation (M))PSERSECR_	CENPF|p.S2957Afs*6|1|0.52|ENSG00000117724|chr1:214657310-214657310|A/-|frameshift_variant;CENPF|p.T1974Pfs*11|1|0.22|ENSG00000117724|chr1:214645483-214645483|A/-|frameshift_variant;CENPF|p.T2189Hfs*3|1|0.28|ENSG00000117724|chr1:214646131-214646131|A/-|frameshift_variant;ENSG00000117724|ENST00000366955|CENPF	39.252832667884924	0.4290233611298554	5				NaN	NaN	0	NaN	8484	4408	12889
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12895	36.083	NaN	2287.8	30	0	258	0.106	+			944	AEIRHVLVTL	10	59	575.8523264039445	1149.690099874689	2	576.3531494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEIRHVLVTL_	ENSG00000092841|ENST00000550697|MYL6;ENST00000548725.5_1_12:56552185-56553955:+|nuORF;nc|ENSG00000092841|P60660-2|MYL6	44.377184641726394	0.5088115166961078	5				NaN	NaN	0	NaN	8485	4408	12889
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12896	36.084	NaN	802.1	30	0	123.76	0.036			+	26773	LVQLKARVL	9	30	347.23593903472266	NaN	0	346.90185546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LVQLKARVL_	REV__ENST00000470861.1_1_9:139571873-139581795:-|nuORF	34.172542307311794	0.30503706118289736	5				NaN	NaN	0	NaN	8486	4408	12889
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12907	36.108	NaN	2790.9	30	0	250.87	0.214	+			13681	GPFSLLPKY	9	62	511.28833835809854	1020.5621237829971	2	511.28759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GPFSLLPKY_	CLVS1|p.V4F|1|0.29|ENSG00000177182|chr8:61299837-61299837|G/T|missense_variant	31.529811441608018	0.5085848003137583	5				NaN	NaN	0	NaN	8494	4411	12906
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12908	36.112	NaN	2176.5	30	0	987.99	0.106	+			35349	SAPFVARAL	9	48	466.27259934704705	930.5306457608941	2	466.271728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAPFVARAL_	ENSG00000104866|ENST00000221462|PPP1R37	45.97224482568171	0.3502073465782774	5				NaN	NaN	0	NaN	8495	4411	12906
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12909	36.114	NaN	1406.2	30	0	125.5	0.106				-1	EKKCVEMFSQ	10	61	651.2965244092243	1300.5784958852485	2	651.2949829101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_EKKC(Carbamidomethyl (C))VEM(Oxidation (M))FSQ_	ENSG00000188738|ENST00000424728|FSIP2;FSIP2|p.D5579Mfs*10|1|0.09|ENSG00000188738|chr2:185806029-185806029|A/-|frameshift_variant;FSIP2|p.K6152Rfs*27|1|0.43|ENSG00000188738|chr2:185807758-185807758|A/-|frameshift_variant;FSIP2|p.K6528Nfs*5|1|0.33|ENSG00000188738|chr2:185808884-185808884|A/-|frameshift_variant;FSIP2|p.V5734Yfs*24|2|0.23|ENSG00000188738|chr2:185806499-185806499|A/-|frameshift_variant;FSIP2|p.V6322*|1|0.42|ENSG00000188738|chr2:185808265-185808265|A/-|frameshift_variant;nc|ENSG00000188738|Q5CZC0-2|FSIP2	39.252832667884924	0.5560298534376815	5				NaN	NaN	0	NaN	8496	4411	12906
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12910	36.115	NaN	1476.7	30	0	170.91	0.106	+			40853	SVFAFGENK	9	55	499.75153923316464	997.4885255331293	2	499.7503662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVFAFGENK_	ENSG00000179051|ENST00000375436|RCC2;ENST00000405832.2_1_6:56297536-56297638:-|nuORF;ENST00000526625.2_1_11:62139723-62139795:+|nuORF;RCC2|p.A423Qfs*56|1|0.13|ENSG00000179051|chr1:17413120-17413120|T/-|frameshift_variant	75.04331003522576	0.118981335847003	5				NaN	NaN	0	NaN	8497	4411	12906
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12911	36.117	NaN	2168.3	30	0	356.5	0.106	+			12961	GETEKLYQL	9	68	540.7836021926395	1079.5526514520789	2	540.7825927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GETEKLYQL_	ENSG00000176623|ENST00000406452|RMDN1;ENST00000522804.5_1_8:87497076-87500839:-|nuORF;nc|ENSG00000176623|Q96DB5-2|RMDN1;nc|ENSG00000176623|Q96DB5-3|RMDN1;RMDN1|p.N157Kfs*2|1|0.46|ENSG00000176623|chr8:86486508-86486509|-/T|frameshift_variant	42.86426827375447	0.38666266728046506	5				NaN	NaN	0	NaN	8498	4411	12906
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12912	36.119	NaN	1730.1	30	0	122.72	0.106	+			25043	LLIFVPYIG	9	57	517.8166760319608	1033.6187991307215	2	517.8147583007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LLIFVPYIG_	ENST00000560409.5_1_15:85213252-85222467:-|nuORF	39.021493756699265	0.43173687394350213	5				NaN	NaN	0	NaN	8499	4411	12906
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12913	36.121	NaN	1394.1	30	0	105.63	0.038			+	9171	EGPPPPPLRRP	11	58	606.8465608882557	1211.6785688433113	2	606.8450927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EGPPPPPLRRP_	REV__ENSG00000177283|ENST00000374694|FZD8	18.262085536374414	0.7849791996189919	5				NaN	NaN	0	NaN	8500	4411	12906
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12920	36.137	NaN	3780.9	30	0	453.22	0.214				-1	 	0	65	488.81432475638434	975.6140965795687	2	488.81268310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8504	4414	12919
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12921	36.141	NaN	1229.5	30	0	104.58	0.106				-1	 	0	39	400.2275892989819	798.4406256647638	2	400.226806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8505	4414	12919
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12922	36.143	NaN	2592.7	30	0	239.03	0.106	+			9781	ENQSYAELI	9	63	533.7553941528212	1065.4962353724422	2	534.2573852539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ENQSYAELI_	FOXO4|p.G102E|1|0.43|ENSG00000184481|chrX:71096833-71096833|G/A|missense_variant	32.81241826257853	0.4965981579233955	5				NaN	NaN	0	NaN	8506	4414	12919
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12923	36.145	NaN	1913.1	30	0	201.65	0.106	+			25262	LNMVCVKLQ	9	62	552.7982324870139	1103.5819120408278	2	552.7977294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_LNMVC(Carbamidomethyl (C))VKLQ_	ENSG00000131558|ENST00000253861|EXOC4	60.97194046774394	0.20551255781574032	5				NaN	NaN	0	NaN	8507	4414	12919
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12924	36.146	NaN	1540	30	0	245.09	0.034	+			6700	AYVHTTPGL	9	55	479.75462096259787	957.4946889919958	2	479.75238037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AYVHTTPGL_	ENSG00000049759|ENST00000400345|NEDD4L;nc|ENSG00000049759|Q96PU5-4|NEDD4L;nc|ENSG00000049759|Q96PU5-5|NEDD4L;nc|ENSG00000049759|Q96PU5-6|NEDD4L;nc|ENSG00000049759|Q96PU5-7|NEDD4L;nc|ENSG00000049759|Q96PU5-9|NEDD4L	47.91560031466742	0.327412564698279	5				NaN	NaN	0	NaN	8508	4414	12919
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12931	36.163	NaN	6862.3	30	0	1516.8	0.214			+	7892	DRSSKREK	8	66	503.27467036644117	1004.5347877996824	2	503.2715759277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DRSSKREK_	REV__ACTR3B-JMJD1C|1|fusion;REV__ENSG00000171988|ENST00000399262|JMJD1C;REV__JMJD1C|p.A2114Cfs*5|1|0.04|ENSG00000171988|chr10:63189399-63189400|-/T|frameshift_variant;REV__JMJD1C|p.I2113Kfs*18|1|0.04|ENSG00000171988|chr10:63189400-63189401|-/TT|frameshift_variant;REV__nc|ENSG00000171988|Q15652-3|JMJD1C	90.60085204095205	0.2756512185673585	5				NaN	NaN	0	NaN	8512	4417	12930
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12932	36.166	NaN	5096	30	0	491.06	0.106	+			33580	RLLEPSDMH	9	73	549.2735852663488	1096.5326175994976	2	549.2732543945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RLLEPSDMH_	ENST00000469591.1_1_2:63169876-63182810:+|nuORF	79.45101966838831	0.09992237243120712	5				NaN	NaN	0	NaN	8513	4417	12930
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12933	36.168	NaN	2585.1	30	0	326.33	0.106	+			17600	IEFKETQAL	9	64	539.7938120426122	1077.5730711520243	2	539.79296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IEFKETQAL_	EIF4A2|p.Q209Lfs*23|1|0.03|ENSG00000156976|chr3:186786269-186786270|-/ACTGTCATTTCTAGATCTAC|frameshift_variant;ENSG00000156976|ENST00000323963|EIF4A2;ENST00000465032.5_1_3:186501384-186502902:+|nuORF;ENST00000465267.5_1_3:186501384-186502902:+|nuORF;ENST00000485101.5_1_3:186502728-186502902:+|nuORF;nc|ENSG00000156976|Q14240-2|EIF4A2	80.45461616416974	0.09558281504443908	5				NaN	NaN	0	NaN	8514	4417	12930
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12934	36.17	NaN	1072.3	30	0	123.46	0.106	+			44037	TPPEALASL	9	46	449.7473776519088	NaN	0	449.74737548828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TPPEALASL_	ENST00000539421.1_1_17:5983889-5983934:+|nuORF	60.97194046774394	0.14517358171632622	5				NaN	NaN	0	NaN	8515	4417	12930
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12935	36.172	NaN	3712.7	30	0	695.75	0.034	+			48625	VTSGQSVRK	9	62	481.2743823141684	960.5342116951368	2	481.273193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTSGQSVRK_	ENSG00000205592|ENST00000454784|MUC19;nc|ENSG00000205592|Q7Z5P9-2|MUC19	52.936696900407355	0.27249468807391813	5				NaN	NaN	0	NaN	8516	4417	12930
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12949	36.201	NaN	12428	30	0	2361.5	0.214				-1	 	0	67	457.2435153850735	912.4724778369471	2	457.242431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8527	4420	12948
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12950	36.205	NaN	2722.4	30	0	276.54	0.106				-1	 	0	57	490.2778443310406	978.5411357288813	2	490.2762451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8528	4420	12948
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12951	36.207	NaN	4457.2	30	0	790.2	0.106	+			44877	TTVLQILQN	9	65	515.3008283666283	1028.5871038000564	2	515.3007202148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TTVLQILQN_	ENST00000394479.3_1_2:61144110-61145349:+|nuORF	42.396135135203025	0.392153681582562	5				NaN	NaN	0	NaN	8529	4420	12948
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12952	36.209	NaN	2850.9	30	0	378.68	0.106	+			2357	AMYTYFQAK	9	66	561.7687082126635	1121.5228634921268	2	561.767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AMYTYFQAK_	ENSG00000116260|ENST00000367602|QSOX1	56.72105179125745	0.24094814563026265	5				NaN	NaN	0	NaN	8530	4420	12948
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12953	36.211	NaN	2102.2	30	0	748.73	0.036				-1	 	0	40	355.19120962390446	1062.5517994719135	3	355.19049072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8531	4420	12948
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12960	36.227	NaN	14616	30	0	2763	0.214				-1	 	0	65	457.2435153850735	912.4724778369471	2	457.2421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8535	4423	12959
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12961	36.231	NaN	1553.6	30	0	286.37	0.106	+			42051	SWRSILTEHKR	11	55	706.8908562044666	1411.767159475733	2	707.3909301757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SWRSILTEHKR_	ENSG00000181450|ENST00000343776|ZNF678	20.83715455343099	0.7712264395190968	5				NaN	NaN	0	NaN	8536	4423	12959
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12962	36.233	NaN	1016.8	30	0	121.91	0.106			+	31196	QGQKIPPDL	9	50	498.2809716944425	994.547390455685	2	498.279052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QGQKIPPDL_	REV__ENSG00000149136|ENST00000278412|SSRP1;REV__ENST00000293880.9_1_11:57098199-57100416:-|nuORF	27.882242232435846	0.5426732730940306	5				NaN	NaN	0	NaN	8537	4423	12959
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12963	36.234	NaN	1819	30	0	215.61	0.036	+			19037	IYDCAKKIL	9	64	533.8024585969706	NaN	0	533.8010864257812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IYDCAKKIL_	ENSG00000085491|ENST00000565488|SLC25A24;nc|ENSG00000085491|Q6NUK1-2|SLC25A24	51.33545320467046	0.19748963086191895	5				NaN	NaN	0	NaN	8538	4423	12959
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12973	36.256	NaN	8616.7	30	0	2032.5	0.214			+	37349	SLEVAGRGAW	10	62	523.2751550691653	1044.5357572051305	2	523.2744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLEVAGRGAW_	REV__chr16:3000118-3000714|144|12.4|0.41|4.9|+|1|GREP1,GREP1|2	42.86426827375447	0.522752283233888	5				NaN	NaN	0	NaN	8545	4426	12972
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12974	36.26	NaN	1916.8	30	0	117.73	0.106			+	10328	ETSPAPAPPPV	11	59	531.7786127307846	NaN	0	531.7780151367188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ETSPAPAPPPV_	REV__ENSG00000186193|ENST00000409687|SAPCD2	50.033510581677724	0.3150780456176802	5				NaN	NaN	0	NaN	8546	4426	12972
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12975	36.262	NaN	1418.5	30	0	270.85	0.106	+			46746	VGRRVNHLG	9	27	336.5342305623405	NaN	0	336.53436279296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VGRRVNHLG_	ENST00000461408.2_1_15:59040902-59041232:-|nuORF	19.359975847455235	0.3714571876404798	5				NaN	NaN	0	NaN	8547	4426	12972
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12976	36.264	NaN	903.08	30	0	63.924	0.033			+	2164	ALLQNITL	8	42	443.2724914550781	NaN	0	443.2724914550781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ALLQNITL_	REV__CON__Q9TRI1;REV__ENSG00000151655|ENST00000358415|ITIH2;REV__ITIH2|p.Y586C|1|0.26|ENSG00000151655|chr10:7732447-7732447|A/G|missense_variant	30.503639358989545	1.7418937515398478	5				NaN	NaN	0	NaN	8548	4426	12972
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12982	36.278	NaN	4430.9	30	0	629.4	0.214			+	32270	QTLSGQLVLA	10	59	515.3008283666283	1028.5871038000564	2	515.8012084960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QTLSGQLVLA_	REV__ENSG00000130939|ENST00000343090|UBE4B;REV__nc|ENSG00000130939|O95155-2|UBE4B;REV__nc|ENSG00000130939|O95155-3|UBE4B;REV__nc|ENSG00000130939|O95155-4|UBE4B;REV__UBE4B|p.F894Lfs*19|1|0.23|ENSG00000130939|chr1:10149269-10149269|T/-|frameshift_variant;REV__UBE4B|p.L1117Ffs*8|1|0.36|ENSG00000130939|chr1:10171152-10171153|-/T|frameshift_variant	69.6276240434122	0.2803623802747859	5				NaN	NaN	0	NaN	8551	4429	12981
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12983	36.282	NaN	1639.1	30	0	156.29	0.106	+			6938	CPFCRHAK	8	55	481.22901465974917	960.4434763862984	2	481.2276306152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_CPFCRHAK_	ENST00000464507.1_1_1:10500374-10502459:+|nuORF	44.53106598305862	0.628196326904373	5				NaN	NaN	0	NaN	8552	4429	12981
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12984	36.284	NaN	1582.4	30	0	163.76	0.106			+	-1	AGAPEKHLVM	10	55	534.7780116670465	1067.5414704008929	2	534.778076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_AGAPEKHLVM(Oxidation (M))_	REV__SIAE|p.Q39H|1|0.35|ENSG00000110013|chr11:124669472-124669472|C/A|missense_variant	35.15202426646627	0.5927656479315102	5				NaN	NaN	0	NaN	8553	4429	12981
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12985	36.285	NaN	1080	30	0	144.77	0.035			+	15833	GWEVLYQV	8	41	497.25438098470295	992.4942090362059	2	497.2533874511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GWEVLYQV_	REV__ENSG00000112511|ENST00000374516|PHF1;REV__ENST00000427826.1_1_6:33383087-33383872:+|nuORF;REV__ENST00000479029.1_1_6:33383289-33383872:+|nuORF;REV__ENST00000486845.1_1_6:33382534-33383872:+|nuORF	31.954861631926434	0.7126016770032289	5				NaN	NaN	0	NaN	8554	4429	12981
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12990	36.3	NaN	1615.3	30	0	146.9	0.143			+	26029	LSLGAGARRGG	11	60	507.7946193897502	NaN	0	507.79522705078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSLGAGARRGG_	REV__ENST00000562955.2_2_1:43919018-43919642:+|nuORF	56.43379154798735	0.26710304324494344	5				NaN	NaN	0	NaN	8556	4432	12989
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12997	36.319	NaN	2591.8	30	0	351.8	0.215	+			17628	IEIYVQKV	8	61	496.2958944154091	990.5772358976183	2	496.2946472167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IEIYVQKV_	CLTC|p.A1374*|1|0.05|ENSG00000141367|chr17:59683464-59683465|-/TA|frameshift_variant;CLTCL1|p.H915Ifs*56|1|0.35|ENSG00000070371|chr22:19221430-19221430|G/-|frameshift_variant;ENSG00000070371|ENST00000427926|CLTCL1;ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000070371|P53675-2|CLTCL1;nc|ENSG00000141367|Q00610-2|CLTC	82.24051045832904	0.30490469762271794	5				NaN	NaN	0	NaN	8560	4435	12996
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	12998	36.323	NaN	1706.7	30	0	99.78	0.035				-1	VDWLTEKM	8	55	519.2534064871976	1036.492260041195	2	519.2530517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_VDWLTEKM(Oxidation (M))_	ENSG00000141543|ENST00000649764|EIF4A3;ENSG00000156976|ENST00000323963|EIF4A2;ENSG00000161960|ENST00000293831|EIF4A1;ENST00000429589.5_1_3:186502413-186505273:+|nuORF;ENST00000468362.5_1_3:186503755-186505556:+|nuORF;ENST00000475653.5_1_3:186502413-186505086:+|nuORF;ENST00000492144.5_1_3:186503809-186505672:+|nuORF;ENST00000497177.1_1_3:186504924-186505672:+|nuORF;ENST00000575978.1_1_17:78111144-78112096:-|nuORF;ENST00000578324.5_1_17:7477602-7481249:+|nuORF;ENST00000581544.5_1_17:7477924-7481249:+|nuORF;ENST00000581621.1_1_17:7476159-7481249:+|nuORF;nc|ENSG00000156976|Q14240-2|EIF4A2;nc|ENSG00000161960|P60842-2|EIF4A1	58.22992032128504	0.519305013932957	5				NaN	NaN	0	NaN	8561	4435	12996
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13010	36.349	NaN	15101	30	0	3333.5	0.214				-1	 	0	74	532.2652058502683	1062.5158587673366	2	532.2645263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8570	4438	13009
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13011	36.352	NaN	1220.5	30	0	206.12	0.106	+			24610	LGRRAQWL	8	52	500.2951034505243	NaN	0	500.2956848144531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LGRRAQWL_	ENSG00000153162|ENST00000283147|BMP6	26.79610172149135	1.7418937515398478	5				NaN	NaN	0	NaN	8571	4438	13009
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13012	36.354	NaN	1151.6	30	0	74.836	0.106			+	43059	TELLFVPI	8	47	466.27647789497684	NaN	0	466.27655029296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TELLFVPI_	REV__ENSG00000010379|ENST00000343164|SLC6A13;REV__SLC6A13|p.V227*|1|0.26|ENSG00000010379|chr12:237175-237175|C/-|frameshift_variant	46.76643321282427	1.7418937515398478	5				NaN	NaN	0	NaN	8572	4438	13009
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13013	36.356	NaN	1555.6	30	0	115.21	0.036			+	-1	MSIMLWKE	8	66	527.259247749607	NaN	0	527.255615234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_MSIM(Oxidation (M))LWKE_	REV__ENST00000459771.5_1_15:99781578-99781722:-|nuORF	45.9519527083369	1.7418937515398478	5				NaN	NaN	0	NaN	8573	4438	13009
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13020	36.372	NaN	5115.5	30	0	516.19	0.214			+	11116	FFPTPRAHQ	9	69	550.786001859198	1099.557450785196	2	550.7852172851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FFPTPRAHQ_	REV__ENSG00000085276|ENST00000651503|MECOM;REV__nc|ENSG00000085276|Q03112-1|MECOM;REV__nc|ENSG00000085276|Q03112-4|MECOM;REV__nc|ENSG00000085276|Q03112-5|MECOM;REV__nc|ENSG00000085276|Q03112-6|MECOM;REV__nc|ENSG00000085276|Q03112-8|MECOM;REV__nc|ENSG00000085276|Q03112|MECOM	42.396135135203025	0.392153681582562	5				NaN	NaN	0	NaN	8577	4441	13019
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13021	36.376	NaN	5488.4	30	0	553.57	0.106			+	6934	CNYFIVGL	8	69	493.24348706438303	984.4724211955661	2	493.2423400878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_C(Carbamidomethyl (C))NYFIVGL_	REV__ENSG00000180287|ENST00000536534|PLD5;REV__ENST00000366545.5_1_1:242253158-242511450:-|nuORF;REV__nc|ENSG00000180287|Q8N7P1-2|PLD5;REV__nc|ENSG00000180287|Q8N7P1-3|PLD5;REV__nc|ENSG00000180287|Q8N7P1-4|PLD5	46.76643321282427	0.6143254112625767	5				NaN	NaN	0	NaN	8578	4441	13019
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13022	36.378	NaN	3696.3	30	0	805.61	0.035				-1	 	0	59	505.2829306373244	1008.5513083414488	2	505.2817077636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8579	4441	13019
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13031	36.398	NaN	2341.6	30	0	308.86	0.214	+			28136	NAIVIHEVY	9	65	529.2882804497507	1056.5620079663013	2	529.7887573242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAIVIHEVY_	ENSG00000132849|ENST00000642238|PATJ;ENST00000484562.5_1_1:62228564-62579919:+|nuORF;nc|ENSG00000132849|Q8NI35-2|PATJ;nc|ENSG00000132849|Q8NI35-3|PATJ;nc|ENSG00000132849|Q8NI35-5|PATJ;nc|ENSG00000132849|Q8NI35|PATJ	51.33545320467046	0.2872990594074956	5				NaN	NaN	0	NaN	8585	4444	13030
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13032	36.402	NaN	1060.2	30	0	107.98	0.034	+			11426	FLTGRIVY	8	52	484.7803234853686	967.5460940375373	2	484.7783508300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FLTGRIVY_	ENSG00000179094|ENST00000317276|PER1;ENST00000579065.1_1_17:8052750-8054072:-|nuORF;nc|ENSG00000179094|O15534-4|PER1;PER1|p.A962Pfs*160|1|0.38|ENSG00000179094|chr17:8143454-8143454|C/-|frameshift_variant;PER1|p.L380Cfs*73|1|0.18|ENSG00000179094|chr17:8148093-8148093|G/-|frameshift_variant;PER1|p.L466*|1|0.14|ENSG00000179094|chr17:8147571-8147571|G/-|frameshift_variant	33.51558372728122	0.7005509609380386	5				NaN	NaN	0	NaN	8586	4444	13030
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13040	36.42	NaN	2406.7	30	0	216.43	0.214			+	24537	LGLLAPAGFL	10	58	486.2989514855966	970.5833500379932	2	486.2977600097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LGLLAPAGFL_	REV__ENSG00000159958|ENST00000291232|TNFRSF13C;REV__nc|ENSG00000159958|Q96RJ3-2|TNFRSF13C	66.42927471994793	0.3073667423445326	5				NaN	NaN	0	NaN	8591	4447	13039
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13041	36.424	NaN	2038.9	30	0	207.43	0.034	+			22217	KSVDPTLAL	9	57	472.27728543631866	942.5400179394373	2	472.2762451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KSVDPTLAL_	CLTC|p.A1374*|1|0.05|ENSG00000141367|chr17:59683464-59683465|-/TA|frameshift_variant;CLTC|p.D632Yfs*7|1|0.15|ENSG00000141367|chr17:59666589-59666590|-/TTACA|frameshift_variant;ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000141367|Q00610-2|CLTC	54.776311868738084	0.25715957988447635	5				NaN	NaN	0	NaN	8592	4447	13039
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13048	36.442	NaN	3442.8	30	0	544.97	0.214				-1	 	0	64	507.26774912663114	1012.5209453200623	2	507.2666320800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8596	4450	13047
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13049	36.445	NaN	3547	30	0	293.88	0.106	+			44631	TTFLLPGQK	9	67	502.7935684267169	1003.5725839202338	2	502.7919616699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTFLLPGQK_	ENSG00000074964|ENST00000361221|ARHGEF10L;ENST00000469726.5_1_1:17942561-18023872:+|nuORF;nc|ENSG00000074964|Q9HCE6-2|ARHGEF10L;nc|ENSG00000074964|Q9HCE6-3|ARHGEF10L;nc|ENSG00000074964|Q9HCE6-4|ARHGEF10L	42.396135135203025	0.392153681582562	5				NaN	NaN	0	NaN	8597	4450	13047
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13050	36.447	NaN	4463.4	30	0	780.44	0.106	+			27345	MIIKQKATM	9	69	548.2981224092233	1094.5816918852465	2	548.296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Oxidation (M)	_M(Oxidation (M))IIKQKATM(Oxidation (M))_	DMD|p.L3485*|2|0.35|ENSG00000198947|chrX:31169543-31169543|G/-|frameshift_variant;ENSG00000198947|ENST00000357033|DMD;nc|ENSG00000198947|P11532-11|DMD;nc|ENSG00000198947|P11532-12|DMD;nc|ENSG00000198947|P11532-13|DMD;nc|ENSG00000198947|P11532-14|DMD;nc|ENSG00000198947|P11532-15|DMD;nc|ENSG00000198947|P11532-16|DMD;nc|ENSG00000198947|P11532-2|DMD;nc|ENSG00000198947|P11532-3|DMD;nc|ENSG00000198947|P11532-4|DMD;nc|ENSG00000198947|P11532|DMD	49.44154591367651	0.3095138337212152	5				NaN	NaN	0	NaN	8598	4450	13047
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13051	36.449	NaN	1691.1	30	0	153.82	0.106				-1	QFRGSKRFC	9	63	593.2998543012184	1184.5851556692367	2	593.2990112304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_QFRGSKRFC(Carbamidomethyl (C))_	ENSG00000111752|ENST00000544916|PHC1;PHC1|p.A848Dfs*59|1|0.09|ENSG00000111752|chr12:8937240-8937241|-/ACCAC|frameshift_variant;PHC1|p.G884Vfs*21|1|0.41|ENSG00000111752|chr12:8937848-8937848|G/-|frameshift_variant	34.172542307311794	0.4838870758800184	5				NaN	NaN	0	NaN	8599	4450	13047
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13052	36.451	NaN	1430.5	30	0	131.2	0.037	+			50347	WVGTNKSLTE	10	56	567.7939453125	NaN	0	567.7939453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_WVGTNKSLTE_	ENSG00000188404|ENST00000236147|SELL;ENST00000463108.5_1_1:169670695-169680678:-|nuORF;nc|ENSG00000188404|P14151-2|SELL;SELL|p.L347Sfs*25|1|0.28|ENSG00000188404|chr1:169701641-169701641|G/-|frameshift_variant	56.43379154798735	0.2634004003759929	5				NaN	NaN	0	NaN	8600	4450	13047
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13058	36.467	NaN	1880	30	0	232.72	0.214	+			19036	IYAVSKKK	8	49	468.7982916003156	935.5820302674313	2	468.7967834472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IYAVSKKK_	ENSG00000138068|ENST00000535679|SULT6B1;nc|ENSG00000138068|Q6IMI4-2|SULT6B1	31.954861631926434	0.7126016770032289	5				NaN	NaN	0	NaN	8603	4453	13057
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13059	36.471	NaN	1422.9	30	0	229.74	0.035			+	6635	AYTILLWI	8	58	496.7925515625851	NaN	0	496.79254150390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AYTILLWI_	REV__THE1B-int_dup1996|chr7:8345870-8347393:+|1.2346957743909006|0.2358979979729452|2.39|457.0|59|1|anti-sense	57.452649787351945	1.7418937515398478	5				NaN	NaN	0	NaN	8604	4453	13057
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13063	36.485	NaN	4561.3	30	0	491.44	0.214				-1	 	0	62	488.81432475638434	975.6140965795687	2	488.8125915527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8605	4456	13062
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13064	36.488	NaN	1290.9	30	0	212.7	0.035	+			29956	PNGVSAVALLV	11	48	520.3117494748764	1038.6089460165526	2	520.3114013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PNGVSAVALLV_	ENSG00000136819|ENST00000372447|C9orf78	37.81151784470057	0.5878881669006212	5				NaN	NaN	0	NaN	8606	4456	13062
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13069	36.503	NaN	2691.7	30	0	278.43	0.214			+	35720	SDLLIGSTSL	10	65	503.27467036644117	1004.5347877996824	2	503.2710266113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SDLLIGSTSL_	REV__DENND5A|p.K895Sfs*7|2|0.23|ENSG00000184014|chr11:9150132-9150132|T/-|frameshift_variant;REV__DENND5A|p.L896Vfs*14|1|0.2|ENSG00000184014|chr11:9150131-9150132|-/T|frameshift_variant;REV__ENSG00000184014|ENST00000328194|DENND5A;REV__nc|ENSG00000184014|Q6IQ26-2|DENND5A	64.20726635412375	0.3275756395432415	5				NaN	NaN	0	NaN	8608	4459	13068
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13070	36.506	NaN	2113.2	30	0	201.6	0.035			+	11693	FRLQATFN	8	48	498.76737434485574	995.5201957565115	2	498.7661437988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FRLQATFN_	REV__CSMD1|p.P1459Qfs*24|1|0.09|ENSG00000183117|chr8:3223840-3223840|G/-|frameshift_variant;REV__ENSG00000183117|ENST00000635120|CSMD1;REV__ENST00000523488.5_1_8:3008913-3253839:-|nuORF;REV__nc|ENSG00000183117|Q96PZ7-2|CSMD1;REV__nc|ENSG00000183117|Q96PZ7-3|CSMD1;REV__nc|ENSG00000183117|Q96PZ7-4|CSMD1	45.97224482568171	0.6192535143389125	5				NaN	NaN	0	NaN	8609	4459	13068
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13074	36.521	NaN	5227.4	30	0	755.42	0.214			+	-1	QLCSIVKQ	8	64	488.2678346499322	974.5211163666644	2	488.266357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_QLC(Carbamidomethyl (C))SIVKQ_	REV__CLSTN2|p.M529I|1|0.42|ENSG00000158258|chr3:140546594-140546594|G/T|missense_variant;REV__ENSG00000158258|ENST00000458420|CLSTN2;REV__ENST00000511524.1_1_3:139654198-140275504:+|nuORF	66.42927471994793	0.4381325844043345	5				NaN	NaN	0	NaN	8610	4462	13073
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13075	36.524	NaN	3905.1	30	0	652.77	0.037				-1	 	0	75	561.7995705413656	1121.584588149531	2	561.7996826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8611	4462	13073
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13080	36.539	NaN	5422.6	30	0	545.78	0.214	+			25199	LMIGTGTVTR	10	65	532.7914821511899	1063.5684113691798	2	532.7913208007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LM(Oxidation (M))IGTGTVTR_	ENSG00000164465|ENST00000338728|DCBLD1	69.6276240434122	0.2803623802747859	5				NaN	NaN	0	NaN	8613	4465	13079
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13081	36.542	NaN	3735.2	30	0	576.44	0.106	+			51039	YLANFYIF	8	71	525.7674912650571	1049.520429596914	2	525.766357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YLANFYIF_	nc|nan|Q6UX73|C16orf89	86.93460362436232	0.2867499496721195	5				NaN	NaN	0	NaN	8614	4465	13079
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13082	36.544	NaN	1251.2	30	0	100.28	0.106	+			24589	LGPSAAQEL	9	45	443.23736572265625	NaN	0	443.23736572265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LGPSAAQEL_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	67.49366992349736	0.1173583512313808	5				NaN	NaN	0	NaN	8615	4465	13079
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13083	36.546	NaN	1703.4	30	0	408.47	0.106			+	25722	LRRALLHEL	9	43	374.2371694264834	NaN	0	374.2374572753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LRRALLHEL_	REV__ENSG00000104044|ENST00000354638|OCA2;REV__nc|ENSG00000104044|Q04671-2|OCA2;REV__nc|ENSG00000104044|Q04671-3|OCA2;REV__OCA2|p.F810Sfs*7|1|0.32|ENSG00000104044|chr15:27844962-27844962|A/-|frameshift_variant	26.69291269510374	0.34280015626154364	5				NaN	NaN	0	NaN	8616	4465	13079
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13084	36.548	NaN	2788.4	30	0	201.99	0.038				-1	 	0	71	616.8416060779643	1231.6686592227286	2	616.8401489257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8617	4465	13079
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13090	36.564	NaN	8488.6	30	0	1111.1	0.214				-1	 	0	73	525.7962995749139	1049.5780462166276	2	525.7959594726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8620	4468	13089
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13091	36.568	NaN	2631.5	30	0	386.07	0.106	+			17854	IFRHDLSW	8	61	537.2805446628558	1072.5465363925116	2	537.2800903320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IFRHDLSW_	SI|p.R248I|2|0.2|ENSG00000090402|chr3:165065325-165065325|C/A|missense_variant	53.351449002276354	0.5676011784961348	5				NaN	NaN	0	NaN	8621	4468	13089
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13092	36.57	NaN	1841.7	30	0	302.7	0.106			+	11820	FSVFSAGFSM	10	54	540.246313710385	1078.47807448757	2	540.7474975585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FSVFSAGFSM_	REV__ENSG00000168234|ENST00000317571|TTC39C;REV__ENST00000578150.1_1_18:21594913-21660647:+|nuORF;REV__nc|ENSG00000168234|Q8N584-2|TTC39C;REV__TTC39C|p.A287Cfs*6|1|0.43|ENSG00000168234|chr18:24082949-24082950|-/T|frameshift_variant;REV__TTC39C|p.E308Kfs*20|2|0.29|ENSG00000168234|chr18:24083013-24083013|A/-|frameshift_variant;REV__TTC39C|p.H227Tfs*31|1|0.38|ENSG00000168234|chr18:24080798-24080798|T/-|frameshift_variant	26.69291269510374	0.6618461711292317	5				NaN	NaN	0	NaN	8622	4468	13089
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13093	36.571	NaN	2059.1	30	0	381.78	0.041			+	50178	WLIKQTIPWMP	11	67	706.8908562044666	1411.767159475733	2	707.3924560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_WLIKQTIPWMP_	REV__CHST15|p.R537W|1|0.36|ENSG00000182022|chr10:124010226-124010226|G/A|missense_variant	19.1035232394073	0.7810393085260824	5				NaN	NaN	0	NaN	8623	4468	13089
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13101	36.601	NaN	2026.9	30	0	407.37	0.143	+			17492	IDDNSNGTY	9	57	499.7070220935911	997.3994912539822	2	499.7061767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IDDNSNGTY_	ENSG00000055609|ENST00000262189|KMT2C;KMT2C|p.F4496Lfs*21|3|0.28|ENSG00000055609|chr7:152148439-152148439|A/-|frameshift_variant;KMT2C|p.I4868Lfs*37|1|0.28|ENSG00000055609|chr7:152138837-152138837|T/-|frameshift_variant;KMT2C|p.K1164Rfs*17|1|0.4|ENSG00000055609|chr7:152222008-152222009|TT/-|frameshift_variant;KMT2C|p.K1247Nfs*56|1|0.22|ENSG00000055609|chr7:152207400-152207400|T/-|frameshift_variant;KMT2C|p.K2867Dfs*7|1|0.28|ENSG00000055609|chr7:152176853-152176854|TT/-|frameshift_variant;KMT2C|p.P2292Hfs*13|1|0.25|ENSG00000055609|chr7:152180985-152180985|G/-|frameshift_variant;KMT2C|p.S2816Ifs*6|1|0.44|ENSG00000055609|chr7:152177007-152177008|-/T|frameshift_variant;KMT2C|p.T3715Qfs*4|1|0.34|ENSG00000055609|chr7:152162434-152162434|T/-|frameshift_variant;nc|ENSG00000055609|Q8NEZ4-2|KMT2C;nc|ENSG00000055609|Q8NEZ4-3|KMT2C	42.396135135203025	0.392153681582562	5				NaN	NaN	0	NaN	8625	4474	13100
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13109	36.622	NaN	7616.1	30	0	4439.4	0.214				-1	 	0	67	489.27543546544376	976.5363179976875	2	489.2740783691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8630	4477	13108
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13110	36.625	NaN	1331.1	30	0	404.69	0.035				-1	ASTKKVVMK	9	32	336.5342305623405	NaN	0	336.5345153808594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_ASTKKVVM(Oxidation (M))K_	CFAP47|p.F1567Vfs*4|1|0.31|ENSG00000165164|chrX:36098829-36098830|-/G|frameshift_variant;CFAP47|p.H2345Afs*15|1|0.09|ENSG00000165164|chrX:36236809-36236810|-/A|frameshift_variant;CFAP47|p.K734Nfs*6|1|0.13|ENSG00000165164|chrX:35971909-35971909|A/-|frameshift_variant;CFAP47|p.P2326Tfs*34|1|0.26|ENSG00000165164|chrX:36236751-36236752|-/A|frameshift_variant;ENSG00000165164|ENST00000378653|CFAP47;nc|ENSG00000165164|Q6ZTR5-1|CFAP47;nc|ENSG00000165164|Q6ZTR5-2|CFAP47;nc|ENSG00000165164|Q6ZTR5-6|CFAP47	19.996771675451527	0.3693019437812985	5				NaN	NaN	0	NaN	8631	4477	13108
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13116	36.641	NaN	2019.2	30	0	280.93	0.214			+	51357	YTAGGIVFVI	10	64	520.2937748678256	1038.5729968024511	2	520.2938232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YTAGGIVFVI_	REV__ENSG00000136631|ENST00000644510|VPS45;REV__ENST00000491789.1_1_1:150071171-150116971:+|nuORF;REV__nc|ENSG00000136631|Q9NRW7-2|VPS45	45.9519527083369	0.4943008177357963	5				NaN	NaN	0	NaN	8634	4480	13115
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13117	36.645	NaN	1685.4	30	0	88.57	0.037	+			12949	GESSLRNFTM	10	62	571.2713020002484	1140.5280510672967	2	571.2705688476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GESSLRNFTM_	ENSG00000153147|ENST00000283131|SMARCA5;ENST00000515531.1_1_4:144464789-144465131:+|nuORF	41.42661286455405	0.5359995577334734	5				NaN	NaN	0	NaN	8635	4480	13115
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13126	36.665	NaN	4238.9	30	0	1352.5	0.214				-1	 	0	55	505.27798946336634	1008.5414259935327	2	505.27667236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8641	4483	13125
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13127	36.669	NaN	3110	30	0	448.77	0.106				-1	 	0	57	476.23884300238007	950.4631330715602	2	476.23760986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8642	4483	13125
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13128	36.671	NaN	1535.6	30	0	296.95	0.106	+			1734	AHLPAPTL	8	46	410.240515069363	818.4664772055261	2	410.2395324707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AHLPAPTL_	ENST00000228468.8_1_12:50471894-50472307:+|nuORF	52.29916861842294	0.578018602984656	5				NaN	NaN	0	NaN	8643	4483	13125
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13129	36.673	NaN	2368.9	30	0	191.23	0.034				-1	 	0	57	485.3093218613785	968.6040907895571	2	485.8097229003906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8644	4483	13125
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13135	36.687	NaN	1779.8	30	0	264.8	0.143			+	37823	SMNLQTTDI	9	59	511.7441040274748	1021.4736551217496	2	511.7431335449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SMNLQTTDI_	REV__ENOX1|p.P124Lfs*79|1|0.27|ENSG00000120658|chr13:43361292-43361292|A/-|frameshift_variant;REV__ENSG00000120658|ENST00000690772|ENOX1	60.11826168202944	0.21262886028301267	5				NaN	NaN	0	NaN	8647	4486	13134
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13142	36.707	NaN	2268.9	30	0	217.44	0.214	+			33649	RMNHFRVY	8	58	569.7826175227132	1137.5506821122262	2	569.781494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_RM(Oxidation (M))NHFRVY_	nc|ENSG00000164556|Q6ZVS7|CFAP144P1	74.51659920185547	0.36926395944126233	5				NaN	NaN	0	NaN	8651	4489	13141
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13143	36.71	NaN	1375.7	30	0	284.97	0.106	+			20897	KIRAWQIA	8	50	493.3005312823909	984.5865096315819	2	493.2996520996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KIRAWQIA_	DNAH3|p.E3315Dfs*37|1|0.1|ENSG00000158486|chr16:20963939-20963940|-/A|frameshift_variant;ENSG00000158486|ENST00000698260|DNAH3;nc|ENSG00000158486|Q8TD57|DNAH3	26.79610172149135	0.7524337208463756	5				NaN	NaN	0	NaN	8652	4489	13141
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13144	36.712	NaN	1783.7	30	0	180.48	0.106			+	-1	CCYCCCCPGAD	11	58	684.6847176919822	NaN	0	684.684814453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	4 Carbamidomethyl (C)	_C(Carbamidomethyl (C))C(Carbamidomethyl (C))YCCC(Carbamidomethyl (C))C(Carbamidomethyl (C))PGAD_	REV__ENST00000220931.10_1_8:102803112-102803181:-|nuORF	0.8280856835056912	0.456735970842152	5				NaN	NaN	0	NaN	8653	4489	13141
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13145	36.714	NaN	1015.5	30	0	58.574	0.037	+			24865	LKENLDRRE	9	57	586.820078815162	NaN	0	586.8190307617188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LKENLDRRE_	ENSG00000138771|ENST00000296043|SHROOM3;ENSG00000146950|ENST00000380913|SHROOM2	37.81151784470057	0.28666463014928195	5				NaN	NaN	0	NaN	8654	4489	13141
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13150	36.729	NaN	2184.9	30	0	236.77	0.214	+			13286	GIYAYGFEK	9	58	524.2620703947302	1046.5095878562604	2	524.2608032226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GIYAYGFEK_	EIF4A2|p.Q209Lfs*23|1|0.03|ENSG00000156976|chr3:186786269-186786270|-/ACTGTCATTTCTAGATCTAC|frameshift_variant;ENSG00000141543|ENST00000649764|EIF4A3;ENSG00000156976|ENST00000323963|EIF4A2;ENSG00000161960|ENST00000293831|EIF4A1;ENST00000465032.5_1_3:186501384-186502902:+|nuORF;ENST00000465222.1_1_3:186502277-186502505:+|nuORF;ENST00000465267.5_1_3:186501384-186502902:+|nuORF;ENST00000467585.1_1_3:186502182-186503751:+|nuORF;ENST00000485101.5_1_3:186501384-186502505:+|nuORF;ENST00000486805.5_1_3:186501384-186502505:+|nuORF;ENST00000575957.1_1_17:78115565-78120760:-|nuORF;ENST00000578324.5_1_17:7477602-7481249:+|nuORF;ENST00000580461.5_1_17:7476163-7478717:+|nuORF;ENST00000581621.1_1_17:7476159-7481249:+|nuORF;ENST00000582848.5_1_17:7476159-7480015:+|nuORF;ENST00000584054.5_1_17:7476159-7478064:+|nuORF;ENST00000584712.5_1_17:7476159-7478717:+|nuORF;ENST00000584901.5_1_17:7476159-7480015:+|nuORF;nc|ENSG00000156976|Q14240-2|EIF4A2;nc|ENSG00000161960|P60842-2|EIF4A1	51.33545320467046	0.2872990594074956	5				NaN	NaN	0	NaN	8656	4492	13149
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13151	36.732	NaN	1393.5	30	0	115.38	0.036			+	27067	MAFWVVALI	9	59	533.2924194335938	NaN	0	533.2924194335938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_M(Oxidation (M))AFWVVALI_	REV__ENSG00000185518|ENST00000394232|SV2B;REV__nc|ENSG00000185518|Q7L1I2-2|SV2B;REV__SV2B|p.G586Wfs*4|2|0.27|ENSG00000185518|chr15:91289561-91289562|-/T|frameshift_variant	49.21078951299608	0.21213183292994464	5				NaN	NaN	0	NaN	8657	4492	13149
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13162	36.756	NaN	1492.1	30	0	192.64	0.144	+			24367	LFQEGSRAF	9	59	527.7694702148438	NaN	0	527.7694702148438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LFQEGSRAF_	ENSG00000101438|ENST00000217420|SLC32A1	53.351449002276354	0.18359631779194618	5				NaN	NaN	0	NaN	8665	4495	13161
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13166	36.773	NaN	3901.2	30	0	661.65	0.214			+	23729	LAVPVVLSCP	10	62	499.2904684881379	996.5663840430758	2	499.28887939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LAVPVVLSCP_	REV__ENST00000338144.7_1_X:129843302-129917646:-|nuORF;REV__ENST00000394363.5_1_X:129837210-129917646:-|nuORF	30.503639358989545	0.6307262373768582	5				NaN	NaN	0	NaN	8666	4498	13165
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13167	36.777	NaN	2402.2	30	0	583.92	0.106	+			46499	VETVYTHVL	9	58	530.7882346237975	1059.561916314395	2	530.7871704101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VETVYTHVL_	ENSG00000163902|ENST00000296255|RPN1	71.29570347882199	0.13518600952103718	5				NaN	NaN	0	NaN	8667	4498	13165
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13168	36.778	NaN	1554.6	30	0	252.71	0.106	+			41688	SVSDIIVVAK	10	60	515.811703223772	1029.608853514344	2	515.8106079101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVSDIIVVAK_	ENSG00000006042|ENST00000579849|TMEM98;ENST00000583120.1_1_17:31258522-31263466:+|nuORF	33.03940026070387	0.6100181892187303	5				NaN	NaN	0	NaN	8668	4498	13165
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13169	36.78	NaN	2181	30	0	289.06	0.106	+			7759	DNSESLKVL	9	63	502.7679977978932	1003.5214426625864	2	502.7664489746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DNSESLKVL_	AZI2|p.R228Pfs*7|1|0.03|ENSG00000163512|chr3:28326916-28326917|-/GCTTTGG|frameshift_variant;ENSG00000163512|ENST00000479665|AZI2;ENST00000463512.5_1_3:28368296-28390095:-|nuORF;nc|ENSG00000163512|Q9H6S1-3|AZI2;nc|ENSG00000163512|Q9H6S1-4|AZI2;nc|ENSG00000163512|Q9H6S1-5|AZI2	72.87924865735499	0.12833875048249987	5				NaN	NaN	0	NaN	8669	4498	13165
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13170	36.782	NaN	1171.7	30	0	150.34	0.037			+	-1	IDCVLMIGALA	11	61	588.309686777272	1174.6048206213438	2	588.3081665039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_IDC(Carbamidomethyl (C))VLMIGALA_	REV__PROKR2|p.G68D|1|0.47|ENSG00000101292|chr20:5314167-5314167|C/T|missense_variant	34.172542307311794	0.6313490974540716	5				NaN	NaN	0	NaN	8670	4498	13165
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13176	36.798	NaN	1331.1	30	0	161.1	0.214			+	29123	NTVKEELI	8	53	473.2671504525425	944.5197479718851	2	473.2664794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NTVKEELI_	REV__tr|U7SQV9|U7SQV9_FUSNUChromosomepartitionproteinSmcOS=FusobacteriumnucleatumCTI-5OX=1316586GN=smcPE=3SV=1	44.116797842482775	0.6307669463330267	5				NaN	NaN	0	NaN	8673	4501	13175
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13177	36.802	NaN	1584.8	30	0	284.01	0.106			+	29582	PFLPAVAGQGL	11	59	535.3050909058151	1068.59562887843	2	535.3046264648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PFLPAVAGQGL_	REV__ENST00000546023.1_1_6:160210218-160210626:-|nuORF	42.396135135203025	0.5251566046092361	5				NaN	NaN	0	NaN	8674	4501	13175
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13178	36.804	NaN	1648.3	30	0	270.95	0.035	+			12934	GESQTLQQF	9	58	519.2491946834872	1036.4838364337743	2	519.2494506835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GESQTLQQF_	ENSG00000197694|ENST00000372739|SPTAN1;nc|ENSG00000197694|Q13813-3|SPTAN1;nc|ENSG00000197694|Q13813|SPTAN1	85.16082228582465	0.07850854922700509	5				NaN	NaN	0	NaN	8675	4501	13175
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13183	36.818	NaN	1973.3	30	0	165.57	0.143	+			8753	EEFTGQLKV	9	61	525.7786645887635	1049.542776244327	2	525.7774047851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EEFTGQLKV_	ENSG00000054654|ENST00000555002|SYNE2;nc|ENSG00000054654|Q8WXH0|SYNE2;SYNE2|p.A5240Qfs*5|1|0.07|ENSG00000054654|chr14:64152639-64152639|G/-|frameshift_variant;SYNE2|p.D3074Ffs*8|1|0.07|ENSG00000054654|chr14:64053132-64053133|-/TTTCTTTTTCAAATACTTG|frameshift_variant;SYNE2|p.F2563Ifs*28|1|0.34|ENSG00000054654|chr14:64051593-64051594|-/A|frameshift_variant;SYNE2|p.F2840Lfs*3|1|0.38|ENSG00000054654|chr14:64052427-64052427|T/-|frameshift_variant;SYNE2|p.F4992Lfs*13|1|0.39|ENSG00000054654|chr14:64140067-64140067|T/-|frameshift_variant;SYNE2|p.K1189Sfs*4|1|0.35|ENSG00000054654|chr14:64000642-64000642|A/-|frameshift_variant;SYNE2|p.L5308Ifs*18|1|0.12|ENSG00000054654|chr14:64158750-64158751|GG/-|frameshift_variant;SYNE2|p.M1669Wfs*6|1|0.36|ENSG00000054654|chr14:64017707-64017707|A/-|frameshift_variant;SYNE2|p.N1656Mfs*19|1|0.18|ENSG00000054654|chr14:64017669-64017669|A/-|frameshift_variant;SYNE2|p.S1830Kfs*9|1|0.34|ENSG00000054654|chr14:64021985-64021986|-/A|frameshift_variant;SYNE2|p.S6651Rfs*83|1|0.29|ENSG00000054654|chr14:64220596-64220597|-/G|frameshift_variant	54.722347961057174	0.257609425301511	5				NaN	NaN	0	NaN	8677	4504	13182
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13195	36.87	NaN	2245.6	30	0	382.53	0.214	+			44039	TPPMDRITY	9	63	555.2683200397074	1108.5220871462147	2	555.76953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_TPPM(Oxidation (M))DRITY_	ENSG00000141027|ENST00000268712|NCOR1;ENST00000470782.5_1_17:15935612-15971511:-|nuORF;nc|ENSG00000141027|O75376-2|NCOR1	40.77816245573522	0.41113185337114944	5				NaN	NaN	0	NaN	8680	4513	13194
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13196	36.874	NaN	1873	30	0	196.51	0.106				-1	SQIDQDIKMS	10	66	590.7809185913966	1179.547284249593	2	590.7816772460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_SQIDQDIKM(Oxidation (M))S_	ENST00000307102.9_1_15:66783683-66783767:+|nuORF	47.95952297671804	0.47580206326914537	5				NaN	NaN	0	NaN	8681	4513	13194
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13197	36.876	NaN	2184.9	30	0	167.24	0.037	+			51603	YYQHIVTTL	9	67	569.3025668285317	1136.5905807238632	2	569.3012084960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YYQHIVTTL_	ENSG00000116005|ENST00000433351|PCYOX1;nc|ENSG00000116005|Q9UHG3-2|PCYOX1	67.49366992349736	0.1516260258713357	5				NaN	NaN	0	NaN	8682	4513	13194
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13206	36.896	NaN	2894.1	30	0	894.39	0.213			+	-1	EYCFGMTSVI	10	69	603.7633819731351	1205.51221101307	2	603.7628173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_EYC(Carbamidomethyl (C))FGMTSVI_	REV__ENST00000376573.8_1_10:22825056-22825101:-|nuORF	34.172542307311794	0.6007644933930345	5				NaN	NaN	0	NaN	8688	4516	13205
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13207	36.9	NaN	1863.3	30	0	207.67	0.106	+			42463	TAMFIASKY	9	63	516.2667078679178	1030.5188628026356	2	516.2659301757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAMFIASKY_	ENSG00000134057|ENST00000256442|CCNB1;nc|ENSG00000134057|P14635-2|CCNB1	80.45461616416974	0.09558281504443908	5				NaN	NaN	0	NaN	8689	4516	13205
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13208	36.902	NaN	2120.3	30	0	323.96	0.106				-1	 	0	56	469.78820364253056	937.5618543518611	2	469.7870788574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8690	4516	13205
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13209	36.904	NaN	1714.1	30	0	104.08	0.106			+	-1	MSCVECALLQ	10	70	613.7622025944166	1225.5098522556332	2	613.7619018554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))SC(Carbamidomethyl (C))VEC(Carbamidomethyl (C))ALLQ_	REV__tr|U7SNI1|U7SNI1_FUSNUGAFdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01767PE=4SV=1	51.19269402634007	0.44601001148513897	5				NaN	NaN	0	NaN	8691	4516	13205
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13210	36.906	NaN	1255.5	30	0	161.32	0.106	+			25513	LPSQDLLGTSS	11	59	559.2919772876033	1116.5694016420066	2	559.2911987304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LPSQDLLGTSS_	ENSG00000183638|ENST00000382483|RP1L1;RP1L1|p.G2243Rfs*6|1|0.25|ENSG00000183638|chr8:10607371-10607372|-/T|frameshift_variant	47.95952297671804	0.44903247279694136	5				NaN	NaN	0	NaN	8692	4516	13205
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13211	36.907	NaN	1563.3	30	0	187.58	0.041				-1	MSACCHAFERL	11	57	712.3000144019907	NaN	0	712.2994995117188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term),2 Carbamidomethyl (C)	_(Acetyl (Protein N-term))MSAC(Carbamidomethyl (C))C(Carbamidomethyl (C))HAFERL_	ENST00000514430.5_1_4:103552854-103553112:-|nuORF	18.262085536374414	0.456735970842152	5				NaN	NaN	0	NaN	8693	4516	13205
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13219	36.926	NaN	4050.5	30	0	355.17	0.214	+			18439	ISCVNLAFK	9	65	526.2850523150388	1050.5555516968775	2	526.28466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_ISC(Carbamidomethyl (C))VNLAFK_	ENST00000227758.6_3_11:102219989-102220022:+|nuORF	120.8684288430529	0.02067403653475984	5				NaN	NaN	0	NaN	8698	4519	13218
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13220	36.93	NaN	2224.8	30	0	433.61	0.106			+	31947	QQRERVALEQR	11	64	706.8893860338145	NaN	0	706.8899536132812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QQRERVALEQR_	REV__ENSG00000166579|ENST00000334527|NDEL1;REV__nc|ENSG00000166579|Q9GZM8-2|NDEL1;REV__nc|ENSG00000166579|Q9GZM8-3|NDEL1	22.579656572578934	0.456735970842152	5				NaN	NaN	0	NaN	8699	4519	13218
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13221	36.932	NaN	2167.5	30	0	182.9	0.106			+	47803	VSINKLNNI	9	66	507.80168652903217	1013.5888201248644	2	507.8008117675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSINKLNNI_	REV__tr|U7T059|U7T059_FUSNUtRNAuridine5-carboxymethylaminomethylmodificationenzymeMnmGOS=FusobacteriumnucleatumCTI-5OX=1316586GN=mnmGPE=3SV=1	44.116797842482775	0.37197099687881774	5				NaN	NaN	0	NaN	8700	4519	13218
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13222	36.933	NaN	1628.4	30	0	345.02	0.036			+	-1	GGCCGLLLLV	10	50	531.2780141560122	NaN	0	531.278076171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_GGC(Carbamidomethyl (C))C(Carbamidomethyl (C))GLLLLV_	REV__ENSG00000177728|ENST00000314256|TMEM94;REV__ENST00000581085.5_1_17:73467944-73489290:+|nuORF;REV__ENST00000585105.5_1_17:73472797-73482194:+|nuORF;REV__KIAA0195|p.F220Sfs*31|1|0.18|ENSG00000177728|chr17:75488797-75488797|C/-|frameshift_variant;REV__KIAA0195|p.H1145Ifs*95|1|0.14|ENSG00000177728|chr17:75497800-75497800|C/-|frameshift_variant;REV__KIAA0195|p.S895Pfs*13|5|0.32|ENSG00000177728|chr17:75494982-75494982|C/-|frameshift_variant;REV__nc|ENSG00000177728|Q12767-2|TMEM94;REV__nc|ENSG00000177728|Q12767-3|TMEM94	35.200714571348534	0.3845941098745963	5				NaN	NaN	0	NaN	8701	4519	13218
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13230	36.952	NaN	2468.5	30	0	277.8	0.215	+			42211	TAAGLMHTF	9	55	474.73502777638305	947.4555026195661	2	474.73419189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAAGLMHTF_	ENSG00000086475|ENST00000327347|SEPHS1;ENSG00000179918|ENST00000478753|SEPHS2;ENST00000446112.1_1_X:72989760-72990255:+|nuORF;nc|ENSG00000086475|P49903-3|SEPHS1;nc|ENSG00000086475|P49903-4|SEPHS1	99.37495909608758	0.03983967222258828	5				NaN	NaN	0	NaN	8706	4522	13229
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13231	36.956	NaN	3981.2	30	0	519.11	0.106				-1	 	0	56	439.7595535190304	877.5045541048609	2	439.7588195800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8707	4522	13229
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13232	36.958	NaN	2299.3	30	0	438.85	0.106			+	-1	PDPKPLCL	8	52	470.2515819181236	938.4886109030472	2	470.25048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_PDPKPLC(Carbamidomethyl (C))L_	REV__ENST00000477541.1_1_6:32916643-32917850:-|nuORF	51.33545320467046	0.5859736979383976	5				NaN	NaN	0	NaN	8708	4522	13229
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13233	36.959	NaN	3099.6	30	0	317.28	0.106	+			42811	TEAQANQISL	10	66	537.7766530190552	1073.5387531049103	2	537.7772216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TEAQANQISL_	ENSG00000110442|ENST00000263401|COMMD9;nc|ENSG00000110442|Q9P000-2|COMMD9	63.42647028704847	0.33467688528802414	5				NaN	NaN	0	NaN	8709	4522	13229
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13234	36.961	NaN	1934	30	0	316.69	0.035				-1	 	0	58	504.28041099412377	1006.5462690550476	2	504.2798767089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8710	4522	13229
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13242	36.98	NaN	553.04	30	0	106.38	0.214			+	37438	SLHRSSGRK	9	26	343.19757011688085	NaN	0	343.1978454589844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLHRSSGRK_	REV__ENSG00000168830|ENST00000305344|HTR1E	19.1035232394073	0.3723251548669699	5				NaN	NaN	0	NaN	8715	4525	13241
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13243	36.983	NaN	1145.6	30	0	249.17	0.035	+			24905	LKNMGFLVG	9	52	489.7752380371094	NaN	0	489.7752380371094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LKNMGFLVG_	ENST00000558090.2_1_15:83513972-83514182:-|nuORF	19.359975847455235	0.3714571876404798	5				NaN	NaN	0	NaN	8716	4525	13241
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13250	37	NaN	15071	30	0	2838.2	0.214				-1	 	0	71	524.8121136326362	1047.6096743320722	2	524.8115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8720	4528	13249
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13251	37.004	NaN	1369.8	30	0	98.234	0.106	+			23913	LDLKATQAL	9	58	486.7908212170407	971.5670895008814	2	486.7892761230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LDLKATQAL_	ENSG00000161960|ENST00000293831|EIF4A1;ENST00000428062.1_1_13:37513331-37513424:-|nuORF;ENST00000550578.1_1_12:53547103-53547616:+|nuORF;ENST00000578324.5_1_17:7477602-7481249:+|nuORF;ENST00000578754.5_2_17:7476163-7480421:+|nuORF;ENST00000580461.5_1_17:7476163-7478717:+|nuORF;ENST00000581621.1_1_17:7476159-7481249:+|nuORF;ENST00000582848.5_1_17:7476159-7480015:+|nuORF;ENST00000584712.5_1_17:7476159-7478717:+|nuORF;ENST00000584901.5_1_17:7476159-7480015:+|nuORF;nc|ENSG00000161960|P60842-2|EIF4A1	72.87924865735499	0.12833875048249987	5				NaN	NaN	0	NaN	8721	4528	13249
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13252	37.006	NaN	1622	30	0	222.97	0.106				-1	TYMKDLYQL	9	65	595.7929084742245	1189.571264015249	2	596.2933349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_TYM(Oxidation (M))KDLYQL_	ENSG00000146376|ENST00000368149|ARHGAP18;nc|ENSG00000146376|Q8N392-2|ARHGAP18	29.170058357718403	0.5306379469863586	5				NaN	NaN	0	NaN	8722	4528	13249
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13253	37.008	NaN	1491.4	30	0	289.7	0.035				-1	ASTKKVVMK	9	34	336.5342305623405	NaN	0	336.53448486328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_ASTKKVVM(Oxidation (M))K_	CFAP47|p.F1567Vfs*4|1|0.31|ENSG00000165164|chrX:36098829-36098830|-/G|frameshift_variant;CFAP47|p.H2345Afs*15|1|0.09|ENSG00000165164|chrX:36236809-36236810|-/A|frameshift_variant;CFAP47|p.K734Nfs*6|1|0.13|ENSG00000165164|chrX:35971909-35971909|A/-|frameshift_variant;CFAP47|p.P2326Tfs*34|1|0.26|ENSG00000165164|chrX:36236751-36236752|-/A|frameshift_variant;ENSG00000165164|ENST00000378653|CFAP47;nc|ENSG00000165164|Q6ZTR5-1|CFAP47;nc|ENSG00000165164|Q6ZTR5-2|CFAP47;nc|ENSG00000165164|Q6ZTR5-6|CFAP47	24.519189625965996	0.35377483217337163	5				NaN	NaN	0	NaN	8723	4528	13249
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13259	37.024	NaN	2281.9	30	0	176.7	0.214	+			20010	KEIGELTQL	9	60	515.7934643567932	1029.5723757803862	2	515.7941284179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEIGELTQL_	ENSG00000148484|ENST00000345264|RSU1;ENST00000464074.6_1_10:16769067-16859404:-|nuORF;nc|ENSG00000148484|Q15404-2|RSU1	53.08895987439943	0.27122541748218487	5				NaN	NaN	0	NaN	8726	4531	13258
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13260	37.028	NaN	1716.1	30	0	179.67	0.106				-1	MLDLSNNSL	9	64	511.7441040274748	1021.4736551217496	2	512.2449951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_M(Oxidation (M))LDLSNNSL_	ENSG00000171236|ENST00000306390|LRG1	52.936696900407355	0.27249468807391813	5				NaN	NaN	0	NaN	8727	4531	13258
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13261	37.03	NaN	1203	30	0	86.449	0.037	+			49682	VYKETCISF	9	63	573.7797746414162	1145.5449963496324	2	573.7797241210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_VYKETC(Carbamidomethyl (C))ISF_	ENSG00000127324|ENST00000247829|TSPAN8;ENST00000552128.2_1_12:71519116-71532942:-|nuORF	63.53385203322761	0.18415635464017938	5				NaN	NaN	0	NaN	8728	4531	13258
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13273	37.056	NaN	1841.6	30	0	114.96	0.214	+			1157	AEMYVAKF	8	51	479.7398922447097	957.4652315562195	2	479.7379455566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEMYVAKF_	EEF2|p.E241Rfs*13|1|0.26|ENSG00000167658|chr19:3982316-3982316|C/-|frameshift_variant;ENSG00000167658|ENST00000309311|EEF2	64.20726635412375	0.4601301477144759	5				NaN	NaN	0	NaN	8737	4534	13272
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13274	37.06	NaN	1498.7	30	0	185.95	0.106	+			41135	SVITQVLNK	9	50	501.303079159533	NaN	0	501.3036193847656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVITQVLNK_	ENSG00000164985|ENST00000380733|PSIP1;PSIP1|p.S443Y|1|0.29|ENSG00000164985|chr9:15468722-15468722|G/T|missense_variant	32.81241826257853	0.3119040447479903	5				NaN	NaN	0	NaN	8738	4534	13272
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13275	37.062	NaN	1186.8	30	0	97.475	0.037			+	-1	SGASNKAICLY	11	58	592.2916259765625	NaN	0	592.2916259765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SGASNKAIC(Carbamidomethyl (C))LY_	REV__ENSG00000148357|ENST00000683500|HMCN2;REV__HMCN2|p.P4784Qfs*22|1|0.32|ENSG00000148357|chr9:130430363-130430363|C/-|frameshift_variant;REV__nc|ENSG00000148357|Q8NDA2-1|HMCN2;REV__nc|ENSG00000148357|Q8NDA2-4|HMCN2	25.125986553469783	0.45344013546260314	5				NaN	NaN	0	NaN	8739	4534	13272
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13280	37.077	NaN	2064.2	30	0	244.6	0.214				-1	 	0	58	454.26681462148645	906.5190763097729	2	454.26531982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8741	4537	13279
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13281	37.081	NaN	1253.1	30	0	118.61	0.037	+			23809	LCPYKQTAVL	10	62	568.3114823390586	NaN	0	568.3104248046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LCPYKQTAVL_	ENST00000366392.2_22:39129283-39129482:+|nuORF	63.53385203322761	0.20542021811828953	5				NaN	NaN	0	NaN	8742	4537	13279
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13289	37.1	NaN	1371.4	30	0	116.22	0.146			+	-1	FPWCLGCYLIF	11	65	709.8306413749856	NaN	0	709.83203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_FPWCLGC(Carbamidomethyl (C))YLIF_	REV__ENST00000292433.3_1_19:13264947-13265175:+|nuORF	24.20275056022122	0.456735970842152	5				NaN	NaN	0	NaN	8747	4540	13288
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13294	37.117	NaN	3937.2	30	0	1010.1	0.214	+			16637	HHLSGQEVPP	10	68	550.777184991116	1099.5398170490319	2	550.7763061523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HHLSGQEVPP_	ENST00000397901.7_1_16:89712038-89712440:-|nuORF	47.657333605630114	0.47858658696240314	5				NaN	NaN	0	NaN	8749	4543	13293
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13295	37.12	NaN	622	30	0	43.938	0.034			+	48771	VTYGPIQF	8	43	462.7446594238281	NaN	0	462.7446594238281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTYGPIQF_	REV__APOB|p.K4541Sfs*8|1|0.34|ENSG00000084674|chr2:21001800-21001800|T/-|frameshift_variant;REV__APOB|p.S3866Yfs*21|1|0.06|ENSG00000084674|chr2:21005271-21005272|-/TAAGAAAT|frameshift_variant;REV__APOB|p.V3255D|1|0.25|ENSG00000084674|chr2:21007104-21007104|A/T|missense_variant;REV__ENSG00000084674|ENST00000233242|APOB	47.91560031466742	1.7418937515398478	5				NaN	NaN	0	NaN	8750	4543	13293
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13299	37.136	NaN	1950.2	30	0	218.6	0.145				-1	QTFKAACETF	10	72	601.7779660967076	NaN	0	601.7796020507812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_QTFKAAC(Carbamidomethyl (C))ETF_	ENSG00000007171|ENST00000313735|NOS2;nc|ENSG00000007171|P35228-2|NOS2;NOS2|p.Y709*|1|0.33|ENSG00000007171|chr17:27767745-27767745|G/-|frameshift_variant	60.11826168202944	0.2333124524861241	5				NaN	NaN	0	NaN	8751	4546	13298
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13306	37.155	NaN	1403.3	30	0	114.42	0.214			+	-1	VPISKSVMNE	10	61	560.2870483398438	NaN	0	560.2870483398438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_VPISKSVM(Oxidation (M))NE_	REV__ENSG00000164062|ENST00000296456|APEH	40.05817265558897	0.3684561582319974	5				NaN	NaN	0	NaN	8755	4549	13305
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13307	37.158	NaN	1392.3	30	0	306.16	0.106	+			23675	LASLLFSGQ	9	48	468.26431735488785	934.5140817765757	2	468.2630310058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LASLLFSGQ_	ENSG00000185739|ENST00000399609|SRL;nc|ENSG00000185739|Q86TD4-1|SRL	40.77816245573522	0.41113185337114944	5				NaN	NaN	0	NaN	8756	4549	13305
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13308	37.16	NaN	1239.4	30	0	141.93	0.036				-1	MGKLLAEAPL	10	54	529.7973704424603	1057.5801879517205	2	529.795166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))GKLLAEAPL_	ADGRE2|p.I749Rfs*49|1|0.1|ENSG00000127507|chr19:14743716-14743722|TGCAAGA/-|frameshift_variant;ENSG00000127507|ENST00000315576|ADGRE2;nc|ENSG00000127507|Q9UHX3-2|ADGRE2;nc|ENSG00000127507|Q9UHX3-3|ADGRE2;nc|ENSG00000127507|Q9UHX3-4|ADGRE2;nc|ENSG00000127507|Q9UHX3-5|ADGRE2;nc|ENSG00000127507|Q9UHX3-6|ADGRE2	36.446750945000026	0.5818864909973037	5				NaN	NaN	0	NaN	8757	4549	13305
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13315	37.177	NaN	2059.3	30	0	371.75	0.142				-1	 	0	48	473.28535188893966	944.5561508446793	2	473.2845153808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8761	4552	13314
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13321	37.196	NaN	1685.2	30	0	202.39	0.146	+			33200	REYQELMNV	9	59	591.2856898055065	1180.556826677813	2	591.2848510742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_REYQELMNV_	CON__H-INV:HIT000292931;CON__P05787;CON__Q8BGZ7;CON__Q9H552;ENSG00000170421|ENST00000692008|KRT8;ENST00000409686.2_1_9:102067468-102068890:+|nuORF;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;ENST00000547031.5_1_12:53292389-53294972:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	52.936696900407355	0.27249468807391813	5				NaN	NaN	0	NaN	8764	4555	13320
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13325	37.213	NaN	1029.8	30	0	139.8	0.214	+			6817	CGYGFTLL	8	43	437.2115150007439	872.4084770682878	2	437.21051025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CGYGFTLL_	ENSG00000274523|ENST00000610322|RCC1L;nc|ENSG00000274523|Q96I51-2|RCC1L;nc|ENSG00000274523|Q96I51-3|RCC1L	49.21078951299608	0.5991576752473486	5				NaN	NaN	0	NaN	8765	4558	13324
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13326	37.217	NaN	1293.5	30	0	154.81	0.035			+	-1	ARMGGRVLF	9	52	511.7808634460043	1021.5471739588086	2	511.78033447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_ARM(Oxidation (M))GGRVLF_	REV__ENSG00000165280|ENST00000358901|VCP;REV__ENST00000493886.5_1_9:35062192-35072350:-|nuORF	40.5726180659479	0.4135428067754104	5				NaN	NaN	0	NaN	8766	4558	13324
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13334	37.236	NaN	1982.9	30	0	566.75	0.144	+			21203	KLEGKSLPCL	10	60	544.3121777675187	1086.6098026018374	2	544.312255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KLEGKSLPCL_	KANSL1|p.K267Sfs*12|1|0.22|ENSG00000120071|chr17:46171344-46171344|T/-|frameshift_variant	23.52269567125451	0.6877354443478558	5				NaN	NaN	0	NaN	8771	4561	13333
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13339	37.253	NaN	12586	30	0	3435	0.215				-1	 	0	71	505.76223251561237	1009.5099120980248	2	505.7613525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8773	4564	13338
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13340	37.256	NaN	1602.3	30	0	154.21	0.036	+			44783	TTQKLVLEY	9	60	547.8100577974262	1093.6055626616524	2	547.8079833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTQKLVLEY_	ENSG00000136848|ENST00000408936|DAB2IP;nc|ENSG00000136848|Q5VWQ8-2|DAB2IP;nc|ENSG00000136848|Q5VWQ8-3|DAB2IP;nc|ENSG00000136848|Q5VWQ8-4|DAB2IP;nc|ENSG00000136848|Q5VWQ8-5|DAB2IP	66.96192283764107	0.15557981141143568	5				NaN	NaN	0	NaN	8774	4564	13338
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13350	37.288	NaN	3043.6	30	0	324.29	0.214				-1	 	0	65	593.8569308974252	1185.6993088616503	2	593.8551635742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8778	4570	13349
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13351	37.292	NaN	1164.1	30	0	149.7	0.036	+			51590	YYPAKIEAI	9	47	534.293194074798	1066.5718352163958	2	534.2926025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YYPAKIEAI_	ENSG00000129292|ENST00000395386|PHF20L1;ENST00000361997.9_1_8:133790074-133829825:+|nuORF;ENST00000395383.5_1_8:133790074-133836319:+|nuORF;nc|ENSG00000129292|A8MW92-2|PHF20L1;nc|ENSG00000129292|A8MW92-4|PHF20L1;PHF20L1-CHMP1A|1|fusion;PHF20L1|p.E981Gfs*15|1|0.18|ENSG00000129292|chr8:132845806-132845807|-/G|frameshift_variant;PHF20L1|p.K574Rfs*28|1|0.31|ENSG00000129292|chr8:132825341-132825341|A/-|frameshift_variant;PHF20L1|p.N322Mfs*42|5|0.3|ENSG00000129292|chr8:132814664-132814664|A/-|frameshift_variant;PHF20L1|p.V535*|4|0.38|ENSG00000129292|chr8:132824019-132824019|A/-|frameshift_variant	26.69291269510374	0.5537881896960711	5				NaN	NaN	0	NaN	8779	4570	13349
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13358	37.31	NaN	1716.6	30	0	101.37	0.214	+			46530	VEYQMKSVL	9	63	548.7891565730899	NaN	0	548.7896118164062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VEYQMKSVL_	ENSG00000159140|ENST00000356577|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-4|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-6|SON;nc|ENSG00000159140|P18583-7|SON;nc|ENSG00000159140|P18583-8|SON;nc|ENSG00000159140|P18583-9|SON	59.93077597824379	0.14961415694175798	5				NaN	NaN	0	NaN	8783	4573	13357
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13359	37.314	NaN	3010.7	30	0	1368.5	0.036	+			37724	SLTASINKLE	10	48	359.20452903313833	1074.591757699615	3	359.2030944824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLTASINKLE_	ENSG00000198780|ENST00000687041|FAM169A	32.75053402867276	0.6123771875927935	5				NaN	NaN	0	NaN	8784	4573	13357
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13370	37.347	NaN	3142.1	30	0	547.38	0.214				-1	 	0	48	422.7615291715353	843.5085054098706	2	422.7604675292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8789	4579	13369
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13371	37.35	NaN	2105.8	30	0	330.87	0.106				-1	 	0	61	486.7911009643623	971.5676489955246	2	486.78985595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8790	4579	13369
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13372	37.352	NaN	2578.2	30	0	218.94	0.106				-1	 	0	66	524.8121136326362	1047.6096743320722	2	524.81201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8791	4579	13369
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13373	37.354	NaN	2197.7	30	0	283.59	0.106			+	10115	ESMCVKTTI	9	59	514.2430507939985	1026.4715486547968	2	514.2421264648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_ESM(Oxidation (M))CVKTTI_	REV__DISC1|p.R735Gfs*12|1|0.33|ENSG00000162946|chr1:232008939-232008939|C/-|frameshift_variant;REV__ENSG00000162946|ENST00000439617|DISC1;REV__ENST00000422590.6_1_1:231829618-232144897:+|nuORF;REV__nc|ENSG00000162946|Q9NRI5-2|DISC1;REV__nc|ENSG00000162946|Q9NRI5-3|DISC1;REV__nc|ENSG00000162946|Q9NRI5-5|DISC1;REV__nc|ENSG00000162946|Q9NRI5-8|DISC1;REV__nc|ENSG00000162946|Q9NRI5-9|DISC1	74.25504064058377	0.12238981753128622	5				NaN	NaN	0	NaN	8792	4579	13369
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13374	37.356	NaN	2165.9	30	0	279.55	0.106	+			14021	GSFVSSLVK	9	57	462.2632404994118	NaN	0	462.26312255859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GSFVSSLVK_	ENSG00000172016|ENST00000305165|REG3A	51.19269402634007	0.19847346126499396	5				NaN	NaN	0	NaN	8793	4579	13369
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13375	37.358	NaN	2632.3	30	0	385.17	0.106	+			11350	FLFNAPEIL	9	57	532.2931595305921	1062.5717661279841	2	532.2918701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FLFNAPEIL_	OR51A4|p.S95L|1|0.39|ENSG00000205497|chr11:4946817-4946817|G/A|missense_variant	71.87747018426188	0.13267044672804276	5				NaN	NaN	0	NaN	8794	4579	13369
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13376	37.36	NaN	1423.8	30	0	175.64	0.035				-1	ASMKKVKSL	9	36	336.5349945850203	1006.5831543552608	3	336.5342712402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_ASM(Oxidation (M))KKVKSL_	ENST00000369426.9_1_1:119575536-119588262:-|nuORF	14.864876125193954	0.6112419832031293	5				NaN	NaN	0	NaN	8795	4579	13369
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13382	37.376	NaN	2107.1	30	0	805.01	0.214	+			21170	KKVTGHLL	8	42	448.29064987342844	894.5667468136569	2	448.2897644042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KKVTGHLL_	PNLIP|p.I372L|1|0.21|ENSG00000175535|chr10:116560469-116560469|A/T|missense_variant	17.364965105453717	0.7956685240855921	5				NaN	NaN	0	NaN	8798	4582	13381
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13383	37.379	NaN	3203.5	30	0	399.7	0.038	+			18099	IKSQNSQESTA	11	60	596.7932563972747	1191.5719598613493	2	597.2932739257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IKSQNSQESTA_	ENSG00000144554|ENST00000675286|FANCD2;nc|ENSG00000144554|Q9BXW9-1|FANCD2	29.550750289552195	0.6798279264880025	5				NaN	NaN	0	NaN	8799	4582	13381
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13394	37.412	NaN	1763.5	30	0	187.5	0.212	+			32793	RASWAFSHRF	10	66	632.8215106494733	1263.6284683657466	2	632.8204345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RASWAFSHRF_	nc|ENSG00000219200|Q6P5S7|RNASEK	26.063383197487333	0.6669871633831898	5				NaN	NaN	0	NaN	8804	4588	13393
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13395	37.416	NaN	1696.7	30	0	114.97	0.106				-1	ALAVFTRM	8	59	462.7523065992499	923.4900602652998	2	462.7513732910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_ALAVFTRM(Oxidation (M))_	ENSG00000277150|ENST00000622749|F8A3	82.30502934623384	0.30436709589983096	5				NaN	NaN	0	NaN	8805	4588	13393
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13396	37.418	NaN	1210.8	30	0	226.75	0.034	+			25092	LLNLLAGLGA	10	44	477.80392648541454	953.5933000376291	2	477.80279541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LLNLLAGLGA_	ENSG00000277494|ENST00000622500|GPIHBP1	37.15910966729921	0.575322462179216	5				NaN	NaN	0	NaN	8806	4588	13393
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13401	37.432	NaN	1671	30	0	191.61	0.214			+	48737	VTVEVGRLV	9	52	486.2992603162336	970.5839676992672	2	486.2971496582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTVEVGRLV_	REV__ENSG00000160221|ENST00000291577|GATD3;REV__nc|ENSG00000160221|P0DPI2-2|GATD3	51.33545320467046	0.2872990594074956	5				NaN	NaN	0	NaN	8808	4591	13400
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13402	37.436	NaN	1620.8	30	0	241.07	0.106	+			23488	LAFPLLAAPA	10	52	492.2988934372641	982.5832339413282	2	492.29791259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LAFPLLAAPA_	ENSG00000139370|ENST00000266771|SLC15A4	26.79610172149135	0.6610034878437611	5				NaN	NaN	0	NaN	8809	4591	13400
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13403	37.438	NaN	1153	30	0	128.8	0.106	+			50085	WGKFLVSI	8	51	475.2781538362268	948.5417547392536	2	475.27618408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_WGKFLVSI_	BLM|p.K1217Nfs*62|2|0.42|ENSG00000197299|chr15:90804254-90804254|A/-|frameshift_variant	49.44154591367651	0.597725784090933	5				NaN	NaN	0	NaN	8810	4591	13400
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13404	37.44	NaN	951.49	30	0	99.137	0.106	+			24170	LENPKQVVI	9	50	520.3108520507812	NaN	0	520.3108520507812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LENPKQVVI_	ENST00000313486.11_1_17:1422693-1422885:-|nuORF	32.81241826257853	0.3119040447479903	5				NaN	NaN	0	NaN	8811	4591	13400
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13405	37.442	NaN	1517.1	30	0	125.92	0.036			+	47906	VSLNAAPQLVT	11	55	556.8202453135847	1111.6259376939693	2	556.8185424804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSLNAAPQLVT_	REV__ENST00000496016.1_1_22:24487805-24487940:+|nuORF	40.05817265558897	0.5571470695993369	5				NaN	NaN	0	NaN	8812	4591	13400
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13410	37.456	NaN	2674.4	30	0	292.03	0.144	+			17638	IEKEGEFTL	9	69	533.2770957768836	1064.539638620567	2	533.2771606445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IEKEGEFTL_	ENSG00000169189|ENST00000361439|NSMCE1;ENST00000565070.5_1_16:27237776-27268891:-|nuORF;ENST00000569236.5_1_16:27236480-27252833:-|nuORF	72.87924865735499	0.12833875048249987	5				NaN	NaN	0	NaN	8814	4594	13409
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13415	37.473	NaN	1236.6	30	0	237.17	0.214				-1	 	0	33	339.2160173295503	676.4174817259006	2	339.2149658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8816	4597	13414
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13416	37.476	NaN	1314	30	0	121.55	0.106				-1	 	0	46	423.74239382017373	845.4702347071475	2	424.2423095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8817	4597	13414
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13417	37.478	NaN	2729	30	0	541.05	0.106	+			32640	QYVDFHNQL	9	67	582.2792972375834	1162.5440415419666	2	582.2786865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QYVDFHNQL_	ENSG00000134899|ENST00000652225|ERCC5;nc|ENSG00000134899|P28715-2|ERCC5	34.172542307311794	0.4838870758800184	5				NaN	NaN	0	NaN	8818	4597	13414
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13418	37.48	NaN	1356.7	30	0	135.91	0.035			+	18210	IMVSQNNVL	9	51	509.2741684974914	1016.5337840617829	2	509.27362060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IMVSQNNVL_	REV__ANGPTL1|p.W318Lfs*22|1|0.15|ENSG00000116194|chr1:178853660-178853661|-/C|frameshift_variant;REV__ENSG00000116194|ENST00000234816|ANGPTL1	66.42927471994793	0.16001998865088202	5				NaN	NaN	0	NaN	8819	4597	13414
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13424	37.496	NaN	1708.4	30	0	140.43	0.214			+	-1	QGLAPEGMMF	10	62	548.7439197386282	1095.4732865440562	2	548.7428588867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_QGLAPEGM(Oxidation (M))MF_	REV__ENST00000485470.1_1_1:150129349-150129586:+|nuORF	35.61828744233558	0.588957954432594	5				NaN	NaN	0	NaN	8822	4600	13423
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13425	37.5	NaN	1129.7	30	0	101.88	0.106			+	-1	VWPERPEM	8	59	530.2507487192267	NaN	0	530.251220703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_VWPERPEM(Oxidation (M))_	REV__ENSG00000204642|ENST00000259951|HLA-F;REV__ENST00000486194.1_1_6:29691304-29692118:+|nuORF;REV__nc|ENSG00000204642|P30511-2|HLA-F;REV__nc|ENSG00000204642|P30511|HLA-F	38.80614096846853	1.7418937515398478	5				NaN	NaN	0	NaN	8823	4600	13423
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13426	37.502	NaN	1516.7	30	0	287.17	0.035	+			29542	PELFFLFL	8	51	513.2884113458578	1024.5622697585154	2	513.2876586914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PELFFLFL_	ENST00000536503.5_1_12:27181995-27182121:+|nuORF	26.79610172149135	0.7524337208463756	5				NaN	NaN	0	NaN	8824	4600	13423
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13433	37.532	NaN	8706.8	30	0	669.94	0.214	+			49711	VYLVRMDP	8	68	496.7649900298332	991.5154271264664	2	497.2662048339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYLVRMDP_	ENSG00000135655|ENST00000280377|USP15;nc|ENSG00000135655|Q9Y4E8-2|USP15;nc|ENSG00000135655|Q9Y4E8-3|USP15;USP15|p.P943Lfs*17|1|0.43|ENSG00000135655|chr12:62404250-62404250|T/-|frameshift_variant;USP15|p.R760Kfs*4|2|0.23|ENSG00000135655|chr12:62391853-62391854|-/A|frameshift_variant	45.9519527083369	0.6193794311207887	5				NaN	NaN	0	NaN	8825	4606	13432
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13434	37.536	NaN	1393.2	30	0	80.774	0.036			+	50571	YAYKLFLY	8	56	540.7924508737518	1079.5703488143035	2	540.7920532226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YAYKLFLY_	REV__tr|U7SIY5|U7SIY5_FUSNULipoproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02276PE=4SV=1	37.028477286268924	0.6747514403204248	5				NaN	NaN	0	NaN	8826	4606	13432
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13440	37.553	NaN	1659.1	30	0	286.51	0.215	+			23239	KYIEGVSDF	9	50	529.2650101547479	1056.5154673762956	2	529.2637329101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KYIEGVSDF_	ENSG00000197429|ENST00000396478|IPP;nc|ENSG00000197429|Q9Y573-2|IPP	62.107414245175825	0.1960472003779324	5				NaN	NaN	0	NaN	8829	4609	13439
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13441	37.556	NaN	2165.1	30	0	168.11	0.106	+			49131	VVLVVAFEGS	10	56	510.29303688714316	1018.5715208410863	2	510.7939147949219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVLVVAFEGS_	ENSG00000004939|ENST00000262418|SLC4A1;nc|ENSG00000004939|P02730-2|SLC4A1;SLC4A1|p.Q550Rfs*9|1|0.09|ENSG00000004939|chr17:44255826-44255826|T/-|frameshift_variant	40.5726180659479	0.5438686920517214	5				NaN	NaN	0	NaN	8830	4609	13439
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13442	37.558	NaN	2525.9	30	0	213.59	0.036	+			6165	AVQGISGLPLK	11	64	541.8338379423186	1081.6531229514371	2	541.8330688476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVQGISGLPLK_	ENSG00000167721|ENST00000301364|TSR1	66.32627574692302	0.2669844048574283	5				NaN	NaN	0	NaN	8831	4609	13439
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13450	37.589	NaN	1604.8	30	0	266.56	0.214	+			41640	SVQSGNLAL	9	49	444.74390516532355	887.4732573974471	2	444.7423095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVQSGNLAL_	ENSG00000011304|ENST00000356948|PTBP1;ENST00000586944.5_1_19:797434-805231:+|nuORF;nc|ENSG00000011304|P26599-1|PTBP1;nc|ENSG00000011304|P26599-2|PTBP1	107.00750918261382	0.032051501805654005	5				NaN	NaN	0	NaN	8833	4615	13449
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13451	37.592	NaN	1480.6	30	0	224.62	0.035				-1	 	0	63	505.76223251561237	1009.5099120980248	2	505.7608947753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8834	4615	13449
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13458	37.611	NaN	2573	30	0	366.07	0.214				-1	 	0	63	550.8388008011796	1099.663048669159	2	550.8379516601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8838	4618	13457
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13459	37.614	NaN	1796.7	30	0	187	0.106				-1	GEVCIKGTNVF	11	60	612.3085535157014	1222.6025540982027	2	612.307373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GEVC(Carbamidomethyl (C))IKGTNVF_	ENSG00000197142|ENST00000354655|ACSL5;ENST00000496328.1_1_10:114181742-114186129:+|nuORF;nc|ENSG00000197142|Q9ULC5-3|ACSL5;nc|ENSG00000197142|Q9ULC5-4|ACSL5	32.03412808689991	0.6537793186749145	5				NaN	NaN	0	NaN	8839	4618	13457
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13460	37.616	NaN	1610.6	30	0	111.86	0.035			+	29962	PNRMWLQP	8	61	521.2676000604341	NaN	0	521.2676391601562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PNRMWLQP_	REV__ENST00000576789.1_3_19:7427669-7440673:+|nuORF	31.954861631926434	1.7418937515398478	5				NaN	NaN	0	NaN	8840	4618	13457
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13470	37.638	NaN	1694.1	30	0	184.35	0.142	+			814	AEFVGVSHL	9	51	479.7547259597737	957.4948989863474	2	479.7541198730469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEFVGVSHL_	ENSG00000141101|ENST00000268802|NOB1;ENST00000502915.1_1_4:139481866-139482694:+|nuORF	45.97224482568171	0.3502073465782774	5				NaN	NaN	0	NaN	8847	4621	13469
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13478	37.671	NaN	2074.6	30	0	761.51	0.214				-1	YLSTSGMFM	9	66	526.7263099177218	1051.4380669022435	2	526.7264404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_YLSTSGMFM(Oxidation (M))_	ENST00000588565.5_1_17:76480964-76481042:+|nuORF	47.91560031466742	0.327412564698279	5				NaN	NaN	0	NaN	8849	4627	13477
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13479	37.674	NaN	1081.4	30	0	81.888	0.034			+	2194	ALNVVFSGK	9	53	467.77102519252804	NaN	0	467.7709045410156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ALNVVFSGK_	REV__ENSG00000120324|ENST00000239446|PCDHB10;REV__ENSG00000177839|ENST00000316105|PCDHB9;REV__PCDHB9|p.E40D|1|0.19|ENSG00000177839|chr5:141187438-141187438|G/T|missense_variant;REV__PCDHB9|p.S298Lfs*14|1|0.47|ENSG00000177839|chr5:141188206-141188206|T/-|frameshift_variant	35.61828744233558	0.29773779453147337	5				NaN	NaN	0	NaN	8850	4627	13477
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13483	37.689	NaN	2791.7	30	0	272.29	0.214	+			17714	IENGHIFTV	9	60	515.2728293278132	1028.5311057224262	2	515.2714233398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IENGHIFTV_	ENSG00000036257|ENST00000264414|CUL3;nc|ENSG00000036257|Q13618-2|CUL3;nc|ENSG00000036257|Q13618-3|CUL3	74.1650062923329	0.12277912660386392	5				NaN	NaN	0	NaN	8851	4630	13482
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13484	37.693	NaN	1356.8	30	0	104.32	0.106	+			18493	ISGTEEPFDP	10	56	546.2467067798622	1090.4788606265242	2	546.2450561523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ISGTEEPFDP_	ENSG00000144596|ENST00000621039|GRIP2;ENSG00000155974|ENST00000359742|GRIP1;nc|ENSG00000144596|Q9C0E4-2|GRIP2;nc|ENSG00000155974|Q9Y3R0-2|GRIP1;nc|ENSG00000155974|Q9Y3R0-3|GRIP1	44.116797842482775	0.5112108506279902	5				NaN	NaN	0	NaN	8852	4630	13482
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13485	37.695	NaN	2134.3	30	0	183.44	0.106	+			25595	LQIMLSHY	8	57	510.7627390290805	1019.510925124961	2	510.7611389160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_LQIM(Oxidation (M))LSHY_	ENST00000267843.8_1_15:49716502-49716595:+|nuORF	60.29395666154354	0.49887135096048313	5				NaN	NaN	0	NaN	8853	4630	13482
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13486	37.697	NaN	2683.3	30	0	240.36	0.034	+			47232	VMKLQKGR	8	51	480.2936334582704	958.5727139833408	2	480.2921142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VMKLQKGR_	ENST00000453008.2_1_2:88927833-88927890:+|nuORF	38.80614096846853	0.6637206697844082	5				NaN	NaN	0	NaN	8854	4630	13482
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13498	37.722	NaN	6872.8	30	0	1168.3	0.141				-1	 	0	55	447.7749195587084	893.5352861842168	2	447.774169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8863	4633	13497
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13506	37.742	NaN	2187.6	30	0	603.29	0.214				-1	 	0	60	506.31444773774865	1010.6143425422973	2	506.3132019042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8868	4636	13505
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13507	37.746	NaN	1282	30	0	232.25	0.035				-1	ASMKKVKSL	9	30	336.53431282972235	NaN	0	336.53436279296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_ASM(Oxidation (M))KKVKSL_	ENST00000369426.9_1_1:119575536-119588262:-|nuORF	26.69291269510374	0.34280015626154364	5				NaN	NaN	0	NaN	8869	4636	13505
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13513	37.762	NaN	4267.9	30	0	372.15	0.214	+			42202	TAAEVQQVL	9	61	479.76504442154305	957.5155359098861	2	479.7636413574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAAEVQQVL_	ENSG00000103067|ENST00000473183|ESRP2;ENSG00000104413|ENST00000433389|ESRP1;ENST00000566774.1_1_16:68264768-68266536:-|nuORF;ESRP1|p.N512Hfs*7|2|0.33|ENSG00000104413|chr8:94674383-94674384|AA/-|frameshift_variant;ESRP1|p.N512Kfs*8|1|0.48|ENSG00000104413|chr8:94674382-94674383|-/A|frameshift_variant;ESRP1|p.N512Tfs*2|2|0.36|ENSG00000104413|chr8:94674383-94674383|A/-|frameshift_variant;nc|ENSG00000103067|Q9H6T0|ESRP2;nc|ENSG00000104413|Q6NXG1-2|ESRP1;nc|ENSG00000104413|Q6NXG1-3|ESRP1;nc|ENSG00000104413|Q6NXG1-4|ESRP1;nc|ENSG00000104413|Q6NXG1-5|ESRP1	65.46538089061403	0.16805504838372562	5				NaN	NaN	0	NaN	8872	4639	13512
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13514	37.766	NaN	3092.1	30	0	487.98	0.106				-1	 	0	55	482.28016789966614	962.5457828661323	2	482.2787780761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8873	4639	13512
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13515	37.768	NaN	1033.3	30	0	109.22	0.106	+			12642	GEIKGFTGI	9	45	461.25604248046875	NaN	0	461.25604248046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEIKGFTGI_	ENSG00000138801|ENST00000265174|PAPSS1;ENSG00000198682|ENST00000456849|PAPSS2;nc|ENSG00000198682|O95340|PAPSS2	49.536043120802724	0.20989033510253738	5				NaN	NaN	0	NaN	8874	4639	13512
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13516	37.769	NaN	2172.7	30	0	349.58	0.034				-1	 	0	53	454.26700014859625	906.5194473639925	2	454.26580810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8875	4639	13512
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13522	37.785	NaN	954.97	30	0	104.17	0.215	+			25898	LSGFLRLA	8	36	438.768096367358	NaN	0	438.76788330078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSGFLRLA_	ENST00000409863.5_1_7:24870486-24873964:-|nuORF	30.503639358989545	1.7418937515398478	5				NaN	NaN	0	NaN	8878	4642	13521
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13523	37.789	NaN	1259.6	30	0	406.55	0.035	+			30314	PTPLTFTLL	9	42	501.7946340288088	NaN	0	501.79425048828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PTPLTFTLL_	ENST00000427442.6_1_20:42157961-42159515:+|nuORF	35.61828744233558	0.29773779453147337	5				NaN	NaN	0	NaN	8879	4642	13521
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13528	37.804	NaN	2270.8	30	0	261.82	0.214			+	11734	FSFSVPISF	9	60	515.7649179648439	1029.5152829964877	2	515.7643432617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FSFSVPISF_	REV__ENST00000474051.1_1_14:68352547-68354002:+|nuORF	53.08895987439943	0.27122541748218487	5				NaN	NaN	0	NaN	8881	4645	13527
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13529	37.807	NaN	1454	30	0	92.277	0.106			+	28719	NNKSLAASQI	10	59	523.283233446519	NaN	0	523.2827758789062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NNKSLAASQI_	REV__ENSG00000061987|ENST00000393630|MON2;REV__ENST00000547095.5_1_12:62864501-62986526:+|nuORF;REV__ENST00000551307.5_1_12:62954224-62986526:+|nuORF;REV__MON2|p.T1274Qfs*3|1|0.36|ENSG00000061987|chr12:62560894-62560894|T/-|frameshift_variant;REV__MON2|p.V1435Afs*17|1|0.03|ENSG00000061987|chr12:62566430-62566431|-/CATCT|frameshift_variant;REV__nc|ENSG00000061987|Q7Z3U7-2|MON2;REV__nc|ENSG00000061987|Q7Z3U7-3|MON2;REV__nc|ENSG00000061987|Q7Z3U7-5|MON2;REV__nc|ENSG00000061987|Q7Z3U7-6|MON2	44.377184641726394	0.34115073642966565	5				NaN	NaN	0	NaN	8882	4645	13527
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13530	37.809	NaN	1902.8	30	0	173.97	0.106	+			24762	LHYNLMLT	8	64	510.7627390290805	1019.510925124961	2	510.76129150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_LHYNLM(Oxidation (M))LT_	ENSG00000072657|ENST00000261180|TRHDE;TRHDE|p.F209Sfs*9|1|0.45|ENSG00000072657|chr12:72273399-72273399|T/-|frameshift_variant	50.0245360154114	0.5941082100236891	5				NaN	NaN	0	NaN	8883	4645	13527
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13531	37.811	NaN	1032.9	30	0	153.99	0.106			+	-1	TALCVSSRLL	10	40	373.87776677223593	NaN	0	373.5438537597656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_TALC(Carbamidomethyl (C))VSSRLL_	REV__ENSG00000157106|ENST00000446231|SMG1;REV__ENST00000565246.6_2_16:70255155-70255302:-|nuORF;REV__ENST00000569764.1_16:18870876-18872178:-|nuORF;REV__nc|ENSG00000157106|Q96Q15-2|SMG1;REV__nc|ENSG00000157106|Q96Q15-3|SMG1;REV__nc|ENSG00000157106|Q96Q15-4|SMG1;REV__SMG1|p.A3214Rfs*29|1|0.06|ENSG00000157106|chr16:18828132-18828133|-/ATTTTCT|frameshift_variant	26.063383197487333	0.4145965855542893	5				NaN	NaN	0	NaN	8884	4645	13527
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13532	37.813	NaN	1102.1	30	0	73.754	0.037	+			2301	AMDIGTPYQF	10	52	571.7615240874263	1141.5084952416526	2	571.7601318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AMDIGTPYQF_	ENSG00000143473|ENST00000271751|KCNH1;KCNH1|p.G827Afs*48|1|0.38|ENSG00000143473|chr1:210683771-210683771|C/-|frameshift_variant;nc|ENSG00000143473|O95259-2|KCNH1	40.77816245573522	0.5419747034533848	5				NaN	NaN	0	NaN	8885	4645	13527
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13536	37.827	NaN	2396	30	0	320.15	0.144	+			31545	QLLNSMMTV	9	69	534.7545299609843	1067.4945069887685	2	534.75537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_QLLNSM(Oxidation (M))M(Oxidation (M))TV_	ENSG00000115661|ENST00000396738|STK16;STK16|p.D276G|1|0.18|ENSG00000115661|chr2:219248468-219248468|A/G|missense_variant;STK16|p.L265S|1|0.11|ENSG00000115661|chr2:219248435-219248435|T/C|missense_variant	56.72105179125745	0.24094814563026265	5				NaN	NaN	0	NaN	8886	4648	13535
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13543	37.845	NaN	3095.6	30	0	227.22	0.214	+			51443	YVDPVNKVL	9	67	523.7986816885749	1045.5828104439497	2	523.7977294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YVDPVNKVL_	ENSG00000140992|ENST00000342085|PDPK1;nc|ENSG00000140992|O15530-2|PDPK1;nc|ENSG00000140992|O15530-3|PDPK1;nc|ENSG00000140992|O15530-4|PDPK1	56.72105179125745	0.24094814563026265	5				NaN	NaN	0	NaN	8890	4651	13542
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13544	37.849	NaN	2981.8	30	0	299.01	0.036	+			171	AAIVAYGLYK	10	70	534.8092003315646	1067.6038477299292	2	534.8074951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAIVAYGLYK_	ENSG00000181061|ENST00000321331|HIGD1A;ENST00000470543.1_1_3:42826765-42845976:-|nuORF;nc|ENSG00000181061|Q9Y241-2|HIGD1A	90.77665401227738	0.12662738171778068	5				NaN	NaN	0	NaN	8891	4651	13542
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13549	37.864	NaN	4890.6	30	0	555.1	0.145				-1	YVVMWKQTE	9	72	600.2915189109601	1198.5684848887201	2	600.2901000976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_YVVM(Oxidation (M))WKQTE_	ENSG00000113296|ENST00000350881|THBS4;ENSG00000169231|ENST00000368378|THBS3;ENST00000469769.1_1_1:155167034-155167397:-|nuORF;ENST00000504720.5_1_5:79374662-79378961:+|nuORF;nc|ENSG00000169231|P49746-2|THBS3	53.351449002276354	0.2690372970092375	5				NaN	NaN	0	NaN	8893	4654	13548
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13555	37.882	NaN	2645.4	30	0	703.83	0.214			+	29579	PFLEFFGK	8	59	492.7623075946507	983.5100622561014	2	492.7604675292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PFLEFFGK_	REV__ENSG00000123992|ENST00000273075|DNPEP;REV__nc|ENSG00000123992|Q9ULA0-2|DNPEP	65.80317337860623	0.44433089765398776	5				NaN	NaN	0	NaN	8896	4657	13554
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13556	37.885	NaN	1092.4	30	0	213.15	0.106	+			468	AAVPRAAFL	9	43	458.27560055379166	914.5366481743833	2	458.2743835449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAVPRAAFL_	ENSG00000089248|ENST00000261735|ERP29;ENST00000553161.1_1_12:112451251-112452397:+|nuORF;nc|ENSG00000089248|P30040-2|ERP29	40.5726180659479	0.4135428067754104	5				NaN	NaN	0	NaN	8897	4657	13554
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13557	37.887	NaN	1264.5	30	0	171.26	0.106			+	26645	LVDVPHVTL	9	50	496.7934804385401	991.5724079438802	2	496.7928466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LVDVPHVTL_	REV__ENSG00000125454|ENST00000416858|SLC25A19;REV__SLC25A19|p.R143H|1|0.27|ENSG00000125454|chr17:75283454-75283454|C/T|missense_variant;REV__SLC25A19|p.T164Pfs*19|1|0.3|ENSG00000125454|chr17:75278306-75278306|C/-|frameshift_variant	38.80614096846853	0.43426287593479557	5				NaN	NaN	0	NaN	8898	4657	13554
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13558	37.889	NaN	1561.4	30	0	125.17	0.035	+			46860	VIKEKKFL	8	49	502.8297676378468	1003.6449823424937	2	502.828369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VIKEKKFL_	ENST00000478384.5_1_X:133905349-133906188:-|nuORF	33.51558372728122	0.7005509609380386	5				NaN	NaN	0	NaN	8899	4657	13554
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13564	37.904	NaN	983.42	30	0	72.003	0.214			+	29355	PAAPSLGFNV	10	52	486.76229876111216	971.5100445890243	2	487.26318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PAAPSLGFNV_	REV__ENSG00000139540|ENST00000454355|SLC39A5	32.81241826257853	0.6118718159329168	5				NaN	NaN	0	NaN	8902	4660	13563
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13565	37.908	NaN	1879.4	30	0	122.96	0.106			+	588	ADLGGKIQML	10	65	531.2870637230753	NaN	0	531.286376953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_ADLGGKIQM(Oxidation (M))L_	REV__tr|U7T5V1|U7T5V1_FUSNUIron-sulfurcluster-bindingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00170PE=4SV=1	49.44154591367651	0.30913310806145605	5				NaN	NaN	0	NaN	8903	4660	13563
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13566	37.909	NaN	1383.9	30	0	195.39	0.035				-1	LRMIYGVF	8	53	507.7734895599044	1013.5324261866089	2	507.7727355957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_LRM(Oxidation (M))IYGVF_	ENST00000249299.6_1_7:117832100-117832181:+|nuORF	39.021493756699265	0.6623843612266921	5				NaN	NaN	0	NaN	8904	4660	13563
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13574	37.928	NaN	3827.9	30	0	308.21	0.214				-1	 	0	65	521.3072204162117	1040.5998878992234	2	521.3068237304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8909	4663	13573
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13575	37.931	NaN	1234.4	30	0	284.92	0.106			+	9113	EGKYQLGI	8	42	454.2478952340738	NaN	0	454.2480163574219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EGKYQLGI_	REV__ENSG00000147041|ENST00000297875|SYTL5;REV__nc|ENSG00000147041|Q8TDW5-2|SYTL5	30.503639358989545	1.7418937515398478	5				NaN	NaN	0	NaN	8910	4663	13573
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13576	37.933	NaN	3229.8	30	0	556.55	0.049				-1	 	0	68	652.0277838831157	1953.0615222495471	3	652.0263061523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8911	4663	13573
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13584	37.952	NaN	1576.7	30	0	437.12	0.215	+			14453	GTAYGFFGK	9	46	474.23434140451536	NaN	0	474.23431396484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTAYGFFGK_	ENST00000580048.1_1_18:72264114-72264453:-|nuORF	42.396135135203025	0.2590952873412954	5				NaN	NaN	0	NaN	8916	4666	13583
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13585	37.955	NaN	1172.3	30	0	119.37	0.106	+			42733	TDILVSKI	8	51	444.7736117938487	NaN	0	444.77337646484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TDILVSKI_	ENSG00000158417|ENST00000289371|EIF5B	71.87747018426188	1.7418937515398478	5				NaN	NaN	0	NaN	8917	4666	13583
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13586	37.957	NaN	1107.3	30	0	115.61	0.106				-1	ETVTGCEGLR	10	55	561.267578125	NaN	0	561.267578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_ETVTGC(Carbamidomethyl (C))EGLR_	ENST00000481129.1_2_10:102758516-102758672:+|nuORF	37.81151784470057	0.3760215235790741	5				NaN	NaN	0	NaN	8918	4666	13583
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13587	37.959	NaN	1073	30	0	100.61	0.106	+			29226	NVYDFKTTY	9	58	575.7748996458195	NaN	0	575.7750854492188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NVYDFKTTY_	ENSG00000160075|ENST00000291386|SSU72;ENST00000378725.3_1_1:1480120-1509937:-|nuORF;nc|ENSG00000160075|Q9NP77-2|SSU72;SSU72|p.L82Ffs*8|1|0.34|ENSG00000160075|chr1:1544981-1544982|-/A|frameshift_variant	36.446750945000026	0.29355505452396785	5				NaN	NaN	0	NaN	8919	4666	13583
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13588	37.961	NaN	1613.5	30	0	110.85	0.106			+	27994	MVTILTACPF	10	66	548.2836995216667	1094.5528461101333	2	548.2823486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MVTILTACPF_	REV__ENSG00000166448|ENST00000339375|TMEM130;REV__nc|ENSG00000166448|Q8N3G9-3|TMEM130;REV__nc|ENSG00000166448|Q8N3G9|TMEM130	40.77816245573522	0.5419747034533848	5				NaN	NaN	0	NaN	8920	4666	13583
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13589	37.963	NaN	1409	30	0	150.78	0.037			+	-1	EPPVILKIKM	10	59	592.3606567382812	NaN	0	592.3606567382812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_EPPVILKIKM(Oxidation (M))_	REV__ENST00000486001.1_1_1:27651822-27652284:+|nuORF	21.9598887501803	0.4201028297492154	5				NaN	NaN	0	NaN	8921	4666	13583
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13600	37.997	NaN	1393.1	30	0	177.39	0.145				-1	LMSVSKVQMQ	10	57	591.7950738304652	1181.5755947277303	2	591.7927856445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_LM(Oxidation (M))SVSKVQM(Oxidation (M))Q_	ENST00000378024.8_2_11:62288753-62288828:-|nuORF	33.921630207806714	0.6028135429846169	5				NaN	NaN	0	NaN	8926	4672	13599
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13606	38.015	NaN	1809.1	30	0	206.73	0.214				-1	 	0	55	448.75393542015496	895.4933179071099	2	448.7525634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8929	4675	13605
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13607	38.019	NaN	1948.3	30	0	182.31	0.035	+			38554	SSFELIVQK	9	61	525.7957243358921	NaN	0	525.7957153320312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSFELIVQK_	ENSG00000108424|ENST00000290158|KPNB1;nc|ENSG00000108424|Q14974-2|KPNB1	36.446750945000026	0.29355505452396785	5				NaN	NaN	0	NaN	8930	4675	13605
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13611	38.033	NaN	1474.5	30	0	166.84	0.214			+	-1	IACCLLVLL	9	54	509.2961264863459	1016.5777000394918	2	509.2956237792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_IACC(Carbamidomethyl (C))LLVLL_	REV__ENSG00000147408|ENST00000692225|CSGALNACT1;REV__nc|ENSG00000147408|Q8TDX6-3|CSGALNACT1	49.21078951299608	0.3122205139198386	5				NaN	NaN	0	NaN	8931	4678	13610
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13612	38.037	NaN	976.91	30	0	80.028	0.034	+			16604	HGLLTTVAY	9	50	487.7686678648215	NaN	0	487.7679443359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HGLLTTVAY_	ENSG00000196475|ENST00000358842|GK2;ENSG00000198814|ENST00000427190|GK;ENSG00000229894|ENST00000505354|GK3;GK2|p.F535Lfs*2|1|0.08|ENSG00000196475|chr4:79406596-79406596|A/-|frameshift_variant;nc|ENSG00000198814|P32189-1|GK;nc|ENSG00000198814|P32189-2|GK;nc|ENSG00000198814|P32189-4|GK	39.252832667884924	0.27938773122138094	5				NaN	NaN	0	NaN	8932	4678	13610
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13617	38.051	NaN	1174.5	30	0	133.41	0.214	+			47048	VLFASKAGAAG	11	52	496.2825175665076	NaN	0	496.2828063964844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VLFASKAGAAG_	ENSG00000120008|ENST00000263461|WDR11;ENST00000497136.6_1_10:122666276-122668222:+|nuORF;ENST00000604714.1_1_10:122667871-122668222:+|nuORF	34.172542307311794	0.4131234684587831	5				NaN	NaN	0	NaN	8934	4681	13616
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13618	38.055	NaN	1704.5	30	0	298.67	0.036	+			27139	MASWRTGPNP	10	60	558.7654834539593	1115.5164139747185	2	558.7646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MASWRTGPNP_	ENST00000344686.6_1_17:43341935-43342603:-|nuORF	30.317721548370564	0.6322445173429027	5				NaN	NaN	0	NaN	8935	4681	13616
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13623	38.07	NaN	2172.1	30	0	278.64	0.141				-1	 	0	51	447.7749195587084	893.5352861842168	2	447.773681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8937	4684	13622
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13630	38.089	NaN	1056.3	30	0	79.594	0.142	+			223	AALSYVLCK	9	52	484.26748967260403	NaN	0	484.268798828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AALSYVLCK_	ENSG00000161921|ENST00000293778|CXCL16	31.529811441608018	0.3183796599642538	5				NaN	NaN	0	NaN	8941	4687	13629
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13634	38.106	NaN	1468.7	30	0	116.37	0.144			+	-1	IDQLKNHSM	9	58	551.2698273115369	1100.5251016898737	2	551.7706298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_IDQLKNHSM(Oxidation (M))_	REV__ENSG00000127083|ENST00000375550|OMD	32.81241826257853	0.4965981579233955	5				NaN	NaN	0	NaN	8942	4690	13633
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13641	38.124	NaN	1433.4	30	0	147.69	0.144			+	8042	DTWDRYDT	8	60	536.2223950843116	1070.4302372354232	2	536.2213134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DTWDRYDT_	REV__ENSG00000000003|ENST00000373020|TSPAN6	35.61828744233558	0.6843154725607303	5				NaN	NaN	0	NaN	8946	4693	13640
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13645	38.14	NaN	3928.7	30	0	553.52	0.214	+			4519	ATKKTKDSH	9	68	508.27967877949095	1014.5448046257819	2	508.28179931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATKKTKDSH_	ENSG00000151687|ENST00000684021|ANKAR	77.31757898189308	0.1091473830098891	5				NaN	NaN	0	NaN	8947	4696	13644
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13646	38.144	NaN	1308.9	30	0	180.48	0.035	+			9847	EPSPPALLR	9	38	490.2828515836021	NaN	0	490.28271484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EPSPPALLR_	ENST00000253237.9_1_19:48957556-48957973:+|nuORF	40.77816245573522	0.2702456086868081	5				NaN	NaN	0	NaN	8948	4696	13644
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13652	38.159	NaN	4397.2	30	0	567.7	0.214	+			28106	NAFKEITTM	9	66	527.7664140177031	1053.5182751022062	2	527.7666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAFKEITTM_	ENSG00000137947|ENST00000370500|GTF2B;ENST00000486078.1_1_1:89325774-89329699:-|nuORF;ENST00000494819.5_1_1:89324456-89357188:-|nuORF	145.15565482312357	0.00806134135205793	5				NaN	NaN	0	NaN	8951	4699	13651
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13653	38.162	NaN	1923.6	30	0	218.42	0.106			+	12043	FYPAFSLAGL	10	58	543.2868225124556	1084.5590920917111	2	543.2865600585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FYPAFSLAGL_	REV__ENST00000329627.11_2_22:18568015-18571019:+|nuORF	29.170058357718403	0.6416167986984785	5				NaN	NaN	0	NaN	8952	4699	13651
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13654	38.164	NaN	1293.6	30	0	223.53	0.106				-1	ASMKKVKSL	9	33	336.53432420272225	NaN	0	336.5342712402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_ASM(Oxidation (M))KKVKSL_	ENST00000369426.9_1_1:119575536-119588262:-|nuORF	20.94693142431847	0.3660861156085067	5				NaN	NaN	0	NaN	8953	4699	13651
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13655	38.166	NaN	1239.9	30	0	56.828	0.034	+			19125	IYLSSTPR	8	61	468.7624270953924	935.5103012575848	2	468.7612609863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IYLSSTPR_	ENST00000486187.5_1_10:43078026-43078305:-|nuORF	44.116797842482775	0.6307669463330267	5				NaN	NaN	0	NaN	8954	4699	13651
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13666	38.2	NaN	1845.8	30	0	352.85	0.214				-1	MLHMKKPN	8	57	515.7633314352013	1029.5121099372025	2	515.7625732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_M(Oxidation (M))LHM(Oxidation (M))KKPN_	ENST00000373840.8_1_9:123943837-123945630:-|nuORF	50.0245360154114	0.5941082100236891	5				NaN	NaN	0	NaN	8959	4705	13665
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13667	38.204	NaN	1813.1	30	0	166.69	0.106			+	-1	LTGWVSLCTY	10	65	600.2915189109601	1198.5684848887201	2	600.290771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LTGWVSLC(Carbamidomethyl (C))TY_	REV__ENST00000261721.8_1_15:83686014-83686098:-|nuORF	25.57405402267927	0.6709832231498071	5				NaN	NaN	0	NaN	8960	4705	13665
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13668	38.206	NaN	1018.4	30	0	88.626	0.034			+	9324	EIFIKATS	8	52	454.7583052468705	NaN	0	454.7580261230469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EIFIKATS_	REV__ENST00000227520.9_1_11:60618398-60618482:+|nuORF	37.15910966729921	1.7418937515398478	5				NaN	NaN	0	NaN	8961	4705	13665
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13674	38.222	NaN	4711	30	0	773.92	0.214				-1	 	0	51	484.7753100293996	967.5360671255992	2	484.77435302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8964	4708	13673
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13675	38.225	NaN	2484.7	30	0	601.3	0.106				-1	 	0	52	464.76698940288	927.51942587256	2	464.76654052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8965	4708	13673
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13676	38.227	NaN	1854.2	30	0	351.01	0.037	+			14931	GTMEWIMIK	9	57	570.776093657425	1139.53763438165	2	570.775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Oxidation (M)	_GTM(Oxidation (M))EWIM(Oxidation (M))IK_	ENSG00000168273|ENST00000477703|UQCC5	52.936696900407355	0.27249468807391813	5				NaN	NaN	0	NaN	8966	4708	13673
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13687	38.263	NaN	3130.1	30	0	377.9	0.214				-1	 	0	60	460.25027542510264	918.4859979170053	2	460.2496337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8971	4714	13686
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13688	38.266	NaN	2731.2	30	0	342.95	0.106	+			26970	LYLAHLCV	8	62	494.7671445461176	987.5197361590352	2	494.7661437988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LYLAHLC(Carbamidomethyl (C))V_	ENSG00000180929|ENST00000322241|GPR62	80.99701575658668	0.31526608040172566	5				NaN	NaN	0	NaN	8972	4714	13686
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13689	38.268	NaN	1095.1	30	0	116.71	0.035			+	47131	VLPKQLPLP	9	56	502.8290421200791	NaN	0	502.8284912109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VLPKQLPLP_	REV__ENSG00000124253|ENST00000319441|PCK1;REV__PCK1|p.N346Qfs*29|1|0.24|ENSG00000124253|chr20:57564238-57564239|-/C|frameshift_variant	57.81127852772723	0.15865383123342353	5				NaN	NaN	0	NaN	8973	4714	13686
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13694	38.283	NaN	7978.1	30	0	1224.9	0.214				-1	VDVKNSMTF	9	72	528.7548263475268	1055.4950997618535	2	528.7538452148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_VDVKNSM(Oxidation (M))TF_	ENSG00000213949|ENST00000282588|ITGA1;ITGA1|p.F633Lfs*11|1|0.19|ENSG00000213949|chr5:52915500-52915500|T/-|frameshift_variant;ITGA1|p.N687Kfs*19|1|0.18|ENSG00000213949|chr5:52918798-52918799|-/A|frameshift_variant	52.936696900407355	0.27249468807391813	5				NaN	NaN	0	NaN	8975	4717	13693
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13695	38.286	NaN	1402.6	30	0	230.96	0.033			+	23988	LDWSAGPK	8	48	437.22675663812305	NaN	0	437.22686767578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LDWSAGPK_	REV__ENSG00000173253|ENST00000358146|DMRT2;REV__ENST00000259622.10_2_9:1056133-1057270:+|nuORF;REV__ENST00000382255.7_2_9:1055783-1057270:+|nuORF;REV__nc|ENSG00000173253|Q9Y5R5-3|DMRT2	55.50420428727701	1.7418937515398478	5				NaN	NaN	0	NaN	8976	4717	13693
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13702	38.304	NaN	4545.2	30	0	1053.8	0.214	+			46566	VFKRGKWK	8	64	524.8248070131818	1047.6350610931636	2	524.8241577148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VFKRGKWK_	tr|U7SKQ1|U7SKQ1_FUSNUMultidrug-effluxtransporterOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02104PE=4SV=1	25.450171626174864	0.7628259754767981	5				NaN	NaN	0	NaN	8980	4720	13701
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13703	38.308	NaN	1909.5	30	0	131.39	0.106			+	2191	ALNQVICVPF	10	64	552.2991298709859	1102.5837068087717	2	552.2980346679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ALNQVICVPF_	REV__ENST00000483205.1_1_3:47551524-47551638:-|nuORF	55.50420428727701	0.4067289358710215	5				NaN	NaN	0	NaN	8981	4720	13701
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13704	38.31	NaN	1534.6	30	0	303.21	0.034	+			35966	SEGTFGIHV	9	44	473.73593902427393	945.4573251153479	2	473.7351989746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEGTFGIHV_	ENSG00000088888|ENST00000428216|MAVS;nc|ENSG00000088888|Q7Z434-4|MAVS	88.64286706044652	0.06869153472052109	5				NaN	NaN	0	NaN	8982	4720	13701
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13710	38.325	NaN	1890.9	30	0	340.68	0.143	+			14779	GTLAEFIQK	9	55	503.78238753589676	1005.5502221385935	2	503.78167724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTLAEFIQK_	ENSG00000160602|ENST00000268766|NEK8;ENST00000584342.5_1_17:27052953-27062286:+|nuORF;ENST00000593261.1_1_17:27055855-27062286:+|nuORF	51.19269402634007	0.2889735674168909	5				NaN	NaN	0	NaN	8985	4723	13709
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13716	38.343	NaN	3083.1	30	0	200.36	0.214				-1	MVIRTSQLI	9	63	538.8097154514442	1075.6048779696882	2	538.808837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))VIRTSQLI_	ENSG00000104738|ENST00000649973|MCM4;MCM4|p.T629Qfs*18|2|0.31|ENSG00000104738|chr8:47971419-47971419|A/-|frameshift_variant	60.11826168202944	0.21262886028301267	5				NaN	NaN	0	NaN	8988	4726	13715
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13717	38.346	NaN	2951.6	30	0	616.87	0.106				-1	 	0	75	749.039785513756	2244.0975271414677	3	749.3721313476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	8989	4726	13715
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13718	38.348	NaN	1519.9	30	0	150.03	0.036	+			15824	GVYSFQFNK	9	60	545.273098614047	1088.5316442948938	2	545.7744750976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GVYSFQFNK_	ENSG00000076067|ENST00000262031|RBMS2;ENST00000525031.2_1_12:94817522-94817669:-|nuORF	69.6276240434122	0.14239879520340665	5				NaN	NaN	0	NaN	8990	4726	13715
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13725	38.365	NaN	2079	30	0	158.42	0.214	+			11259	FIMDRAQAL	9	60	532.7824046975879	1063.5502564619758	2	532.7808837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FIMDRAQAL_	ENSG00000105576|ENST00000425528|TNPO2;ENST00000588484.1_1_19:12826020-12830096:-|nuORF;nc|ENSG00000105576|O14787-2|TNPO2;TNPO2|p.H347Pfs*4|1|0.35|ENSG00000105576|chr19:12711373-12711374|-/G|frameshift_variant	42.86426827375447	0.38666266728046506	5				NaN	NaN	0	NaN	8994	4729	13724
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13726	38.368	NaN	947.06	30	0	56.676	0.035	+			15872	GYLADPAKF	9	52	491.2558898925781	NaN	0	491.2558898925781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GYLADPAKF_	ENSG00000137547|ENST00000260102|MRPL15	49.44154591367651	0.21054156626303966	5				NaN	NaN	0	NaN	8995	4729	13724
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13731	38.383	NaN	3360.2	30	0	459.92	0.145			+	10600	EYLKTCQHA	9	58	575.2710347158779	1148.5275164985558	2	575.2699584960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_EYLKTC(Carbamidomethyl (C))QHA_	REV__ENC1|p.G499Vfs*26|1|0.12|ENSG00000171617|chr5:74634990-74634990|C/-|frameshift_variant;REV__ENC1|p.R348Gfs*39|1|0.42|ENSG00000171617|chr5:74635445-74635445|C/-|frameshift_variant;REV__ENC1|p.S350Lfs*37|1|0.18|ENSG00000171617|chr5:74635439-74635439|C/-|frameshift_variant;REV__ENSG00000171617|ENST00000302351|ENC1;REV__nc|ENSG00000171617|O14682-2|ENC1	51.33545320467046	0.2872990594074956	5				NaN	NaN	0	NaN	8997	4732	13730
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13740	38.405	NaN	4593.1	30	0	1175.7	0.214	+			15268	GTTITLVLK	9	51	473.30343718911666	944.5923214450333	2	473.30242919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTTITLVLK_	ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF;ENST00000559111.1_1_15:99798356-99798647:+|nuORF	58.22992032128504	0.22837015374068087	5				NaN	NaN	0	NaN	9003	4735	13739
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13741	38.409	NaN	1260.7	30	0	106.58	0.035			+	8036	DTVAGDTLLL	10	63	509.2771636505319	NaN	0	509.2773132324219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DTVAGDTLLL_	REV__ENSG00000214078|ENST00000397443|CPNE1;REV__ENST00000401607.6_1_20:34214165-34218368:-|nuORF;REV__ENST00000473373.1_1_20:34214440-34214716:-|nuORF;REV__ENST00000483495.5_1_20:34214165-34218616:-|nuORF	49.44154591367651	0.30913310806145605	5				NaN	NaN	0	NaN	9004	4735	13739
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13748	38.427	NaN	4641.2	30	0	998.09	0.154				-1	 	0	70	749.039785513756	2244.0975271414677	3	749.7059936523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9008	4738	13747
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13754	38.445	NaN	2629	30	0	342.07	0.214			+	12158	GAKGRRCQPK	10	59	550.8099358006676	1099.6053186681352	2	550.8090209960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GAKGRRCQPK_	REV__ENSG00000135835|ENST00000367588|KIAA1614;REV__KIAA1614|p.N687Mfs*3|1|0.24|ENSG00000135835|chr1:180935966-180935966|A/-|frameshift_variant	49.44154591367651	0.46214596422418036	5				NaN	NaN	0	NaN	9011	4741	13753
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13755	38.448	NaN	2302.3	30	0	290.37	0.106			+	-1	SLVYCRRP	8	62	525.7777780562444	NaN	0	525.7781372070312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SLVYC(Carbamidomethyl (C))RRP_	REV__ENSG00000100485|ENST00000216373|SOS2;REV__nc|ENSG00000100485|Q07890-2|SOS2	38.80614096846853	1.7418937515398478	5				NaN	NaN	0	NaN	9012	4741	13753
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13756	38.45	NaN	1446	30	0	121.93	0.106	+			24126	LEKTEFTL	8	54	490.77032318861757	979.5260934440352	2	490.7677307128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LEKTEFTL_	ENSG00000168386|ENST00000477258|FILIP1L;FILIP1L|p.L673Yfs*5|1|0.1|ENSG00000168386|chr3:99849658-99849658|A/-|frameshift_variant;FILIP1L|p.R478Q|1|0.29|ENSG00000168386|chr3:99850243-99850243|C/T|missense_variant;nc|ENSG00000168386|Q4L180-2|FILIP1L;nc|ENSG00000168386|Q4L180-3|FILIP1L;nc|ENSG00000168386|Q4L180-5|FILIP1L;nc|ENSG00000168386|Q4L180-6|FILIP1L;nc|ENSG00000168386|Q4L180-7|FILIP1L;nc|ENSG00000168386|Q4L180|FILIP1L	44.377184641726394	0.6291511924298419	5				NaN	NaN	0	NaN	9013	4741	13753
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13757	38.452	NaN	2326.9	30	0	456.7	0.038			+	-1	LLCWRLGMLA	10	65	596.3226729480058	1190.6307929628115	2	596.3214111328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_LLCWRLGM(Oxidation (M))LA_	REV__ENST00000569028.2_1_16:34714672-34714819:-|nuORF	23.04248740728303	0.69165701907106	5				NaN	NaN	0	NaN	9014	4741	13753
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13763	38.469	NaN	6935	30	0	1593.6	0.214				-1	 	0	54	457.2778537343191	912.5411545354382	2	457.27642822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9017	4744	13762
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13764	38.472	NaN	1474.8	30	0	195.54	0.106			+	-1	VVSLLSMCR	9	58	532.7824046975879	1063.5502564619758	2	533.2821655273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_VVSLLSMC(Carbamidomethyl (C))R_	REV__RIMKLB|p.R315C|1|0.24|ENSG00000166532|chr12:8773566-8773566|C/T|missense_variant	27.882242232435846	0.5426732730940306	5				NaN	NaN	0	NaN	9018	4744	13762
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13765	38.474	NaN	1518.4	30	0	141.71	0.039	+			14909	GTLTQNEMIFK	11	64	641.329856864268	1280.6451607953359	2	641.3271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTLTQNEMIFK_	ENSG00000054793|ENST00000338821|ATP9A;ENSG00000166377|ENST00000426216|ATP9B;nc|ENSG00000054793|O75110-2|ATP9A;nc|ENSG00000166377|O43861-2|ATP9B	43.650786325866115	0.5079891456189096	5				NaN	NaN	0	NaN	9019	4744	13762
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13777	38.509	NaN	2256.2	30	0	437.63	0.144	+			26975	LYLDEAHSI	9	64	530.7703985648119	1059.5262441964237	2	530.7692260742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LYLDEAHSI_	ENSG00000100596|ENST00000216484|SPTLC2	82.30502934623384	0.08758161712619916	5				NaN	NaN	0	NaN	9025	4750	13776
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13781	38.525	NaN	3930.1	30	0	1257.5	0.213			+	-1	LMGRLFIMHL	10	60	631.8415961870644	1261.6686394409287	2	631.8407592773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_LM(Oxidation (M))GRLFIM(Oxidation (M))HL_	REV__BVES|p.K157Rfs*17|1|0.13|ENSG00000112276|chr6:105125460-105125460|T/-|frameshift_variant;REV__ENSG00000112276|ENST00000314641|BVES	23.04248740728303	0.69165701907106	5				NaN	NaN	0	NaN	9026	4753	13780
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13782	38.529	NaN	2363.9	30	0	455.5	0.106	+			50034	WEAALRSL	8	56	473.2584493137528	NaN	0	473.2578430175781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WEAALRSL_	ANPEP|p.S700R|1|0.35|ENSG00000166825|chr15:89797634-89797634|T/G|missense_variant	34.172542307311794	1.7418937515398478	5				NaN	NaN	0	NaN	9027	4753	13780
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13783	38.531	NaN	1735.7	30	0	232.78	0.106				-1	FVINAIYSM	9	51	537.2693847298185	NaN	0	537.2686157226562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_FVINAIYSM(Oxidation (M))_	ENSG00000168959|ENST00000305447|GRM5;GRM5|p.Q927Sfs*99|1|0.32|ENSG00000168959|chr11:88509453-88509453|C/-|frameshift_variant;nc|ENSG00000168959|P41594-2|GRM5;nc|ENSG00000168959|P41594-3|GRM5	35.61828744233558	0.29773779453147337	5				NaN	NaN	0	NaN	9028	4753	13780
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13784	38.532	NaN	2198.9	30	0	367.49	0.106			+	10535	EWPRHAAR	8	64	511.7682664803431	1021.5219800274862	2	511.7686462402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EWPRHAAR_	REV__ENST00000409186.1_1_13:61989245-61989275:-|nuORF	38.80614096846853	0.6637206697844082	5				NaN	NaN	0	NaN	9029	4753	13780
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13785	38.534	NaN	1514.4	30	0	96.121	0.035	+			6105	AVNMVPFPR	9	63	515.7796746676095	1029.5447964020188	2	515.7793579101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVNMVPFPR_	CON__ENSEMBL:ENSBTAP00000025008;ENSG00000101162|ENST00000217133|TUBB1;ENSG00000104833|ENST00000264071|TUBB4A;ENSG00000137267|ENST00000333628|TUBB2A;ENSG00000137285|ENST00000259818|TUBB2B;ENSG00000173213|ENST00000308911|TUBB8B;ENSG00000176014|ENST00000317702|TUBB6;ENSG00000188229|ENST00000340384|TUBB4B;ENSG00000196230|ENST00000327892|TUBB;ENSG00000258947|ENST00000315491|TUBB3;ENSG00000261456|ENST00000568584|TUBB8;ENST00000290377.9_1_9:141071128-141071713:+|nuORF;ENST00000417736.2_1_18:12308439-12326126:+|nuORF;ENST00000518096.1_1_8:30210219-30210855:+|nuORF;ENST00000604929.1_1_9:140136931-140138005:+|nuORF;nc|ENSG00000258947|Q13509-2|TUBB3	53.351449002276354	0.2690372970092375	5				NaN	NaN	0	NaN	9030	4753	13780
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13792	38.552	NaN	1889.8	30	0	170	0.146				-1	GNLELAWDML	10	61	589.2800637396523	NaN	0	589.27978515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_GNLELAWDM(Oxidation (M))L_	ENSG00000132780|ENST00000350030|NASP;nc|ENSG00000132780|P49321-2|NASP;nc|ENSG00000132780|P49321-3|NASP;nc|ENSG00000132780|P49321-4|NASP	36.446750945000026	0.3805027428805705	5				NaN	NaN	0	NaN	9034	4756	13791
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13796	38.569	NaN	1453	30	0	190.03	0.214			+	24115	LEKQGLFF	8	50	491.2729508297735	980.531348726347	2	491.271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LEKQGLFF_	REV__ENSG00000105641|ENST00000222248|SLC5A5	29.841539824830324	0.7289191502596711	5				NaN	NaN	0	NaN	9035	4759	13795
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13797	38.572	NaN	1139.9	30	0	502.62	0.032	+			46014	VAVLLGGLA	9	29	406.76546672436456	NaN	0	406.765380859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VAVLLGGLA_	ENSG00000103044|ENST00000569188|HAS3	21.70233525837049	0.3635294413921169	5				NaN	NaN	0	NaN	9036	4759	13795
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13811	38.626	NaN	2134.2	30	0	243.23	0.214			+	47051	VLFKEFNW	8	64	541.7867134586128	1081.5588739840255	2	541.7850341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VLFKEFNW_	REV__ENSG00000198704|ENST00000361902|GPX6;REV__ENSG00000211445|ENST00000388825|GPX3;REV__ENSG00000224586|ENST00000412168|GPX5;REV__ENSG00000233276|ENST00000419783|GPX1;REV__ENST00000517973.1_1_5:150400193-150407688:+|nuORF	60.29395666154354	0.49887135096048313	5				NaN	NaN	0	NaN	9041	4768	13810
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13812	38.63	NaN	1456	30	0	335.81	0.106				-1	ASTKKVVMK	9	26	336.5349761351321	1006.5830990055964	3	336.5343933105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_ASTKKVVM(Oxidation (M))K_	CFAP47|p.F1567Vfs*4|1|0.31|ENSG00000165164|chrX:36098829-36098830|-/G|frameshift_variant;CFAP47|p.H2345Afs*15|1|0.09|ENSG00000165164|chrX:36236809-36236810|-/A|frameshift_variant;CFAP47|p.K734Nfs*6|1|0.13|ENSG00000165164|chrX:35971909-35971909|A/-|frameshift_variant;CFAP47|p.P2326Tfs*34|1|0.26|ENSG00000165164|chrX:36236751-36236752|-/A|frameshift_variant;ENSG00000165164|ENST00000378653|CFAP47;nc|ENSG00000165164|Q6ZTR5-1|CFAP47;nc|ENSG00000165164|Q6ZTR5-2|CFAP47;nc|ENSG00000165164|Q6ZTR5-6|CFAP47	13.45404412870281	0.6112419832031293	5				NaN	NaN	0	NaN	9042	4768	13810
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13813	38.632	NaN	1024.5	30	0	65.713	0.038			+	10929	FDNKDESMVH	10	56	611.2639490452115	NaN	0	611.2647094726562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FDNKDESMVH_	REV__ENSG00000056586|ENST00000357244|RC3H2	30.317721548370564	0.4006274431774794	5				NaN	NaN	0	NaN	9043	4768	13810
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13821	38.664	NaN	1398.5	30	0	117.86	0.143	+			47410	VPNKVIQCF	9	64	524.2880077952417	1046.5614626572833	2	524.287353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VPNKVIQCF_	CLTC|p.A1374*|1|0.05|ENSG00000141367|chr17:59683464-59683465|-/TA|frameshift_variant;CLTC|p.D632Yfs*7|1|0.15|ENSG00000141367|chr17:59666589-59666590|-/TTACA|frameshift_variant;ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000141367|Q00610-2|CLTC	44.377184641726394	0.36891676396732553	5				NaN	NaN	0	NaN	9045	4774	13820
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13825	38.681	NaN	3727.1	30	0	771.18	0.144			+	46579	VFNLPQLLE	9	62	536.8048888600295	1071.5952247868588	2	536.8038940429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VFNLPQLLE_	REV__ENSG00000120820|ENST00000360814|GLT8D2	44.116797842482775	0.37197099687881774	5				NaN	NaN	0	NaN	9046	4777	13824
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13837	38.717	NaN	1224.4	30	0	211.4	0.214	+			3097	ASGGIFVLK	9	52	446.26963580111914	890.5247186690383	2	446.268310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASGGIFVLK_	ENSG00000030066|ENST00000378460|NUP160;ENST00000526870.1_3_11:47861380-47861614:-|nuORF;nc|ENSG00000030066|Q12769|NUP160	49.44154591367651	0.3095138337212152	5				NaN	NaN	0	NaN	9052	4783	13836
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13838	38.721	NaN	1768.3	30	0	118.86	0.106			+	36588	SFYYSIKF	8	58	527.7654978544434	1053.5164427756868	2	527.7647094726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SFYYSIKF_	REV__ENSG00000181104|ENST00000319211|F2R	40.5726180659479	0.6527593143185008	5				NaN	NaN	0	NaN	9053	4783	13836
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13839	38.723	NaN	1462.7	30	0	272.9	0.106			+	26649	LVEFTLLPV	9	54	515.8123867635503	1029.6102205939005	2	515.810302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LVEFTLLPV_	REV__ENSG00000226479|ENST00000426077|TMEM185B;REV__TMEM185B|p.P341Lfs*4|3|0.55|ENSG00000226479|chr2:120221955-120221955|G/-|frameshift_variant	31.954861631926434	0.5046124803899898	5				NaN	NaN	0	NaN	9054	4783	13836
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13840	38.725	NaN	1277.9	30	0	193.83	0.035			+	27381	MKKAQRNI	8	61	494.78884865533183	987.5631443774637	2	494.7872314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MKKAQRNI_	REV__tr|U7SJJ2|U7SJJ2_FUSNUhistidinekinaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02067PE=4SV=1	47.91560031466742	0.6071945918984287	5				NaN	NaN	0	NaN	9055	4783	13836
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13845	38.739	NaN	1443	30	0	516.68	0.142			+	7571	DIIMSKVVG	9	42	481.2727081150835	960.530863296967	2	481.7728576660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DIIMSKVVG_	REV__ENSG00000178209|ENST00000345136|PLEC;REV__nc|ENSG00000178209|Q15149-2|PLEC;REV__nc|ENSG00000178209|Q15149-3|PLEC;REV__nc|ENSG00000178209|Q15149-5|PLEC;REV__nc|ENSG00000178209|Q15149-6|PLEC;REV__nc|ENSG00000178209|Q15149-7|PLEC;REV__nc|ENSG00000178209|Q15149-8|PLEC;REV__nc|ENSG00000178209|Q15149-9|PLEC;REV__nc|ENSG00000178209|Q15149|PLEC	29.14955571784316	0.5308295550522326	5				NaN	NaN	0	NaN	9057	4786	13844
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13854	38.761	NaN	2169.9	30	0	308.48	0.214	+			27328	MIAALLHGR	9	54	491.2861524080319	980.5577518828638	2	491.284423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MIAALLHGR_	ENSG00000164880|ENST00000404767|INTS1	40.5726180659479	0.4135428067754104	5				NaN	NaN	0	NaN	9063	4789	13853
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13855	38.765	NaN	1967.8	30	0	126.38	0.035	+			46193	VDWQIRQV	8	60	522.2869509394094	1042.5593489456187	2	522.2871704101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VDWQIRQV_	ENSG00000126522|ENST00000304874|ASL;nc|ENSG00000126522|P04424-2|ASL;nc|ENSG00000126522|P04424-3|ASL	87.75429964447693	0.2842685068779738	5				NaN	NaN	0	NaN	9064	4789	13853
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13861	38.781	NaN	344.4	30	0	65.963	0.214				-1	 	0	19	327.202042149886	326.194765683286	1	327.2016906738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9067	4792	13860
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13862	38.785	NaN	2153.3	30	0	332.02	0.106				-1	 	0	44	431.7622704695667	861.5099880059335	2	431.7611389160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9068	4792	13860
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13863	38.787	NaN	1495	30	0	132.45	0.106	+			45641	TYRNVMEQF	9	58	594.2811671885904	1186.5477814439807	2	594.280029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TYRNVMEQF_	BAIAP2L1|p.A287Lfs*11|2|0.27|ENSG00000006453|chr7:98310542-98310542|G/-|frameshift_variant;BAIAP2L1|p.F462Lfs*34|1|0.21|ENSG00000006453|chr7:98304232-98304232|A/-|frameshift_variant;BAIAP2L1|p.N24D|1|0.22|ENSG00000006453|chr7:98362414-98362414|T/C|missense_variant;BAIAP2L1|p.N36Ifs*6|1|0.24|ENSG00000006453|chr7:98362382-98362382|C/-|frameshift_variant;BAIAP2L1|p.P436Hfs*60|4|0.39|ENSG00000006453|chr7:98304311-98304311|G/-|frameshift_variant;ENSG00000006453|ENST00000005260|BAIAP2L1;ENST00000462558.5_1_7:97937677-98030347:-|nuORF	37.50817390946774	0.44948750990682723	5				NaN	NaN	0	NaN	9069	4792	13860
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13864	38.788	NaN	1597.4	30	0	105.66	0.106	+			18543	ISMDLQLTNK	10	66	581.8110579645961	NaN	0	581.8110961914062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ISMDLQLTNK_	ENSG00000100280|ENST00000357586|AP1B1;ENST00000472057.1_1_22:29727525-29736761:-|nuORF;nc|ENSG00000100280|Q10567-2|AP1B1;nc|ENSG00000100280|Q10567-3|AP1B1;nc|ENSG00000100280|Q10567-4|AP1B1	45.908116695636124	0.331471961372572	5				NaN	NaN	0	NaN	9070	4792	13860
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13865	38.79	NaN	1007.3	30	0	89.356	0.038	+			6872	CLGQKSCPRAH	11	51	600.2903513214785	NaN	0	600.291748046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_CLGQKSCPRAH_	ENST00000508848.5_1_7:102181988-102207051:-|nuORF	23.52269567125451	0.456735970842152	5				NaN	NaN	0	NaN	9071	4792	13860
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13873	38.821	NaN	1687.9	30	0	127.68	0.214			+	50058	WFFHLGAHL	9	57	564.2919021911644	1126.5692514491286	2	564.29052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WFFHLGAHL_	REV__ENST00000304858.6_1_5:132388040-132400692:+|nuORF	39.021493756699265	0.43173687394350213	5				NaN	NaN	0	NaN	9073	4798	13872
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13874	38.824	NaN	1230.3	30	0	163.59	0.035			+	37577	SLNIINSLL	9	56	493.79932939230923	985.5841058514185	2	493.7982482910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLNIINSLL_	REV__tr|U7T2L6|U7T2L6_FUSNUDNAgyrasesubunitAOS=FusobacteriumnucleatumCTI-5OX=1316586GN=gyrAPE=3SV=1	47.95952297671804	0.32689736945648856	5				NaN	NaN	0	NaN	9074	4798	13872
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13883	38.856	NaN	1091.2	30	0	228.85	0.142			+	50087	WGLAGLALL	9	38	457.2784285277578	912.5423041223156	2	457.2763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WGLAGLALL_	REV__ENSG00000223802|ENST00000623882|CERS1;REV__nc|ENSG00000223802|P27544-2|CERS1	29.841539824830324	0.5243625958137083	5				NaN	NaN	0	NaN	9077	4804	13882
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13887	38.872	NaN	2698.3	30	0	437.46	0.214	+			28990	NSLYLLHY	8	62	511.7682664803431	1021.5219800274862	2	511.7675476074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NSLYLLHY_	ENSG00000171931|ENST00000395665|FBXW10;ENSG00000241322|ENST00000395906|FBXW10B;nc|ENSG00000171931|Q5XX13-2|FBXW10;nc|ENSG00000171931|Q5XX13-3|FBXW10;nc|ENSG00000171931|Q5XX13-4|FBXW10	46.76643321282427	0.6143254112625767	5				NaN	NaN	0	NaN	9078	4807	13886
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13888	38.875	NaN	2117.4	30	0	401.09	0.106			+	-1	VFEIYQKM	8	53	537.2693847298185	NaN	0	537.270263671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_VFEIYQKM(Oxidation (M))_	REV__ENSG00000048392|ENST00000251810|RRM2B;REV__ENSG00000171848|ENST00000304567|RRM2;REV__ENST00000426279.1_1_X:44168653-44169127:-|nuORF;REV__nc|ENSG00000048392|Q7LG56-2|RRM2B;REV__nc|ENSG00000048392|Q7LG56-3|RRM2B;REV__nc|ENSG00000048392|Q7LG56-6|RRM2B;REV__nc|ENSG00000171848|P31350-2|RRM2	38.80614096846853	1.7418937515398478	5				NaN	NaN	0	NaN	9079	4807	13886
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13889	38.877	NaN	1380.1	30	0	411.23	0.106	+			46431	VERRPLGWP	9	47	555.3150452642792	1108.6155375953583	2	555.3141479492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VERRPLGWP_	ENST00000489692.1_2_1:235492632-235492674:+|nuORF	25.450171626174864	0.5654022654467333	5				NaN	NaN	0	NaN	9080	4807	13886
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13890	38.879	NaN	1009.3	30	0	89.43	0.035	+			42080	SYFALQVGK	9	58	506.7776508436475	NaN	0	506.77783203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SYFALQVGK_	ENSG00000085871|ENST00000265498|MGST2;ENST00000502587.1_1_4:140587164-140599797:+|nuORF;ENST00000515067.1_1_4:140587191-140608853:+|nuORF;MGST2|p.K103Nfs*8|2|0.22|ENSG00000085871|chr4:139703529-139703529|A/-|frameshift_variant;nc|ENSG00000085871|Q99735-2|MGST2	69.6276240434122	0.10825701912424071	5				NaN	NaN	0	NaN	9081	4807	13886
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13896	38.896	NaN	979.2	30	0	122.16	0.142	+			49511	VWLWAVEA	8	42	487.26017422023426	972.5057955072685	2	487.2589111328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VWLWAVEA_	ENSG00000082516|ENST00000285873|GEMIN5	37.028477286268924	0.6747514403204248	5				NaN	NaN	0	NaN	9084	4810	13895
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13900	38.913	NaN	2044.6	30	0	259.63	0.143	+			17794	IETTGTYQL	9	56	513.2618693078487	NaN	0	513.262939453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IETTGTYQL_	ENSG00000007171|ENST00000313735|NOS2;nc|ENSG00000007171|P35228-2|NOS2;NOS2|p.A650Pfs*53|1|0.21|ENSG00000007171|chr17:27769063-27769063|C/-|frameshift_variant;NOS2|p.Y709*|1|0.33|ENSG00000007171|chr17:27767745-27767745|G/-|frameshift_variant	69.6276240434122	0.10825701912424071	5				NaN	NaN	0	NaN	9085	4813	13899
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13912	38.949	NaN	4811	30	0	681.54	0.214	+			51345	YSSQCKID	8	54	500.72332252076416	999.4320921083283	2	500.72283935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_YSSQC(Carbamidomethyl (C))KID_	tr|U7SUK2|U7SUK2_FUSNUDUF1353domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01199PE=4SV=1	82.30502934623384	0.30436709589983096	5				NaN	NaN	0	NaN	9091	4819	13911
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13913	38.953	NaN	2105.3	30	0	407.01	0.036	+			17865	IFTNTVARF	9	56	534.79688976254	1067.57922659188	2	534.7972412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IFTNTVARF_	AKAP11|p.C1327Lfs*13|1|0.05|ENSG00000023516|chr13:42302724-42302725|-/CTTCTACTTTATAATC|frameshift_variant;AKAP11|p.F1607Sfs*48|1|0.11|ENSG00000023516|chr13:42303562-42303562|T/-|frameshift_variant;AKAP11|p.H1753Ifs*3|1|0.11|ENSG00000023516|chr13:42308589-42308589|T/-|frameshift_variant;AKAP11|p.H747Tfs*7|1|0.07|ENSG00000023516|chr13:42300981-42300981|T/-|frameshift_variant;AKAP11|p.N964Mfs*17|1|0.38|ENSG00000023516|chr13:42301633-42301633|A/-|frameshift_variant;AKAP11|p.S919Pfs*33|1|0.11|ENSG00000023516|chr13:42301498-42301498|T/-|frameshift_variant;ENSG00000023516|ENST00000025301|AKAP11	44.377184641726394	0.36891676396732553	5				NaN	NaN	0	NaN	9092	4819	13911
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13932	39.022	NaN	1914.6	30	0	212.6	0.214	+			10579	EYIRSLNQF	9	67	585.3023398445584	1168.5901267559168	2	585.3009643554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EYIRSLNQF_	ENSG00000141452|ENST00000269221|RMC1;ENST00000589215.5_1_18:21087981-21111645:+|nuORF;ENST00000591367.5_1_18:21109371-21111665:+|nuORF	82.30502934623384	0.08758161712619916	5				NaN	NaN	0	NaN	9099	4831	13931
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13933	39.026	NaN	884.27	30	0	60.56	0.106			+	-1	LMNVIQGFK	9	53	533.2907104492188	NaN	0	533.2907104492188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LM(Oxidation (M))NVIQGFK_	REV__ENSG00000116106|ENST00000281821|EPHA4;REV__nc|ENSG00000116106|P54764-2|EPHA4	38.80614096846853	0.28164298475537564	5				NaN	NaN	0	NaN	9100	4831	13931
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13934	39.027	NaN	1402.6	30	0	293.29	0.035			+	17073	HRLFGHKL	8	33	336.5349970360798	1006.5831617084394	3	336.5343017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HRLFGHKL_	REV__ENSG00000107404|ENST00000378888|DVL1;REV__nc|ENSG00000107404|O14640-2|DVL1	14.664097394203935	0.7913966407026132	5				NaN	NaN	0	NaN	9101	4831	13931
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13938	39.042	NaN	1997	30	0	385.84	0.143	+			18687	ITAVTVNQSL	10	44	523.299523938629	1044.584494944058	2	523.2984008789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ITAVTVNQSL_	CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000425226.1_1_2:203706028-203706388:-|nuORF;ENST00000550170.5_1_12:53294858-53298765:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	42.33807565288922	0.5276008846745733	5				NaN	NaN	0	NaN	9102	4834	13937
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13944	39.061	NaN	2165.4	30	0	318.26	0.142				-1	 	0	49	470.6854794785802	939.3564060239604	2	470.6846008300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9105	4837	13943
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13948	39.077	NaN	1330.9	30	0	104.64	0.214	+			45310	TVSDAILRY	9	57	519.2861026447125	1036.557652356225	2	519.2854614257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVSDAILRY_	ENSG00000002919|ENST00000359238|SNX11;nc|ENSG00000002919|Q9Y5W9-2|SNX11	54.722347961057174	0.257609425301511	5				NaN	NaN	0	NaN	9106	4840	13947
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13949	39.08	NaN	1832.5	30	0	124.99	0.106			+	22849	KVIKKMEAE	9	63	538.3124578572728	1074.6103627813454	2	538.3126220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVIKKMEAE_	REV__tr|U7SV96|U7SV96_FUSNUThreonine--tRNAligaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=thrSPE=3SV=1	51.33545320467046	0.2872990594074956	5				NaN	NaN	0	NaN	9107	4840	13947
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13950	39.082	NaN	1500.6	30	0	127.81	0.106			+	-1	MVQVKLSKL	9	60	531.3227431188014	1060.6309333044028	2	531.3216552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))VQVKLSKL_	REV__ENST00000472616.1_1_7:139796786-139796831:-|nuORF	34.172542307311794	0.4838870758800184	5				NaN	NaN	0	NaN	9108	4840	13947
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13951	39.084	NaN	953.87	30	0	83.391	0.035			+	31782	QPKPSKSSF	9	46	503.2731094932966	1004.5316660533932	2	503.2718505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QPKPSKSSF_	REV__ENSG00000116748|ENST00000520113|AMPD1;REV__nc|ENSG00000116748|P23109-2|AMPD1	32.81241826257853	0.4965981579233955	5				NaN	NaN	0	NaN	9109	4840	13947
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13962	39.12	NaN	4242.5	30	0	1182.7	0.212				-1	IMCSSGVHRCT	11	61	654.2854283806377	1306.5563038280752	2	654.283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_IMC(Carbamidomethyl (C))SSGVHRC(Carbamidomethyl (C))T_	ENSG00000046889|ENST00000288368|PREX2;ENST00000520235.1_1_8:69103966-69132518:+|nuORF	22.579656572578934	0.7529490144093228	5				NaN	NaN	0	NaN	9114	4846	13961
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13963	39.124	NaN	1694	30	0	182.63	0.106				-1	MVRRVILA	8	56	487.3013651323615	972.5881773315231	2	487.2996826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_M(Oxidation (M))VRRVILA_	ENSG00000013503|ENST00000228347|POLR3B;nc|ENSG00000013503|Q9NW08-2|POLR3B;POLR3B|p.K691Nfs*7|1|0.25|ENSG00000013503|chr12:106444574-106444574|G/-|frameshift_variant;POLR3B|p.M1020Nfs*18|1|0.13|ENSG00000013503|chr12:106501392-106501393|-/A|frameshift_variant;POLR3B|p.V869Sfs*8|1|0.27|ENSG00000013503|chr12:106463506-106463507|-/A|frameshift_variant	37.028477286268924	0.6747514403204248	5				NaN	NaN	0	NaN	9115	4846	13961
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13964	39.126	NaN	1534.2	30	0	102.08	0.106	+			50801	YEQILNTKL	9	61	561.3144678469793	NaN	0	561.31396484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YEQILNTKL_	ENSG00000174574|ENST00000432648|AKIRIN1	65.15724298150197	0.1273232316122292	5				NaN	NaN	0	NaN	9116	4846	13961
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13965	39.127	NaN	968.64	30	0	102.43	0.106	+			19165	IYRGEEDL	8	54	497.7428830266437	NaN	0	497.7425537109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IYRGEEDL_	CADPS2|p.D1011Nfs*3|1|0.04|ENSG00000081803|chr7:122388716-122388717|-/ATGTATT|frameshift_variant;CADPS2|p.I824*|1|0.21|ENSG00000081803|chr7:122438351-122438351|G/-|frameshift_variant;CADPS2|p.N1185Tfs*15|1|0.4|ENSG00000081803|chr7:122345632-122345632|T/-|frameshift_variant;ENSG00000081803|ENST00000449022|CADPS2;nc|ENSG00000081803|Q86UW7-2|CADPS2;nc|ENSG00000081803|Q86UW7-3|CADPS2	49.44154591367651	1.7418937515398478	5				NaN	NaN	0	NaN	9117	4846	13961
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13966	39.129	NaN	976.05	30	0	156.36	0.106			+	13366	GLAKVLSVP	9	42	442.28537260209384	882.5561922709877	2	442.2837219238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GLAKVLSVP_	REV__ENSG00000125999|ENST00000253354|BPIFB1	45.9519527083369	0.35044536499095585	5				NaN	NaN	0	NaN	9118	4846	13961
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13967	39.131	NaN	499.24	30	0	49.281	0.033			+	26594	LTVSIGVAP	9	34	428.7610778808594	NaN	0	428.7610778808594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LTVSIGVAP_	REV__ENSG00000198721|ENST00000380118|ECI2;REV__ENST00000380120.6_1_6:4116110-4130812:-|nuORF;REV__ENST00000464057.5_1_6:4116110-4125894:-|nuORF;REV__ENST00000464583.5_1_6:4119386-4125894:-|nuORF;REV__ENST00000496241.6_1_6:4116110-4130478:-|nuORF;REV__nc|ENSG00000198721|O75521-2|ECI2	30.503639358989545	0.3235605894931338	5				NaN	NaN	0	NaN	9119	4846	13961
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13973	39.147	NaN	1192.7	30	0	138.83	0.214				-1	 	0	48	450.28278445435194	898.5510159755039	2	450.2818908691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9122	4849	13972
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13974	39.151	NaN	834.46	30	0	73.593	0.034			+	39790	STLAGLLAAL	10	41	465.2864322121978	NaN	0	465.287109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STLAGLLAAL_	REV__ENST00000367866.6_1_1:167394884-167394998:+|nuORF	38.80614096846853	0.372755673314885	5				NaN	NaN	0	NaN	9123	4849	13972
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13985	39.186	NaN	5674.3	30	0	876.58	0.145				-1	 	0	61	548.2707081301862	1094.5268633271724	2	548.2709350585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9128	4855	13984
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13989	39.202	NaN	1080.5	30	0	118.8	0.214	+			28614	NKSIAQGIIT	10	53	522.8063939668258	NaN	0	522.8057861328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NKSIAQGIIT_	ENSG00000138336|ENST00000373644|TET1;nc|ENSG00000138336|Q8NFU7-2|TET1;TET1|p.N1409Tfs*2|1|0.24|ENSG00000138336|chr10:68646950-68646950|A/-|frameshift_variant	38.753607047826485	0.3729281687199363	5				NaN	NaN	0	NaN	9129	4858	13988
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13990	39.205	NaN	1111.8	30	0	240.12	0.106			+	40850	SVFAAKGGRS	10	39	490.26874665847055	978.5229403837411	2	490.2677001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVFAAKGGRS_	REV__ENST00000479413.1_1_9:74526474-74526639:+|nuORF	30.317721548370564	0.6322445173429027	5				NaN	NaN	0	NaN	9130	4858	13988
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13991	39.207	NaN	1101.8	30	0	277.49	0.106			+	25980	LSIVLETLF	9	51	517.8084106445312	NaN	0	517.8084106445312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSIVLETLF_	REV__ENSG00000167969|ENST00000301729|ECI1;REV__ENST00000561688.1_1_16:2294286-2301561:-|nuORF;REV__ENST00000563029.5_1_16:2293317-2301515:-|nuORF;REV__nc|ENSG00000167969|P42126-2|ECI1	25.450171626174864	0.34907449758287085	5				NaN	NaN	0	NaN	9131	4858	13988
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13992	39.209	NaN	1197.9	30	0	152.7	0.035	+			7341	DAVYHMVY	8	47	499.227104680784	996.439656428368	2	499.2255554199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DAVYHMVY_	ENSG00000136830|ENST00000373312|NIBAN2;nc|ENSG00000136830|Q96TA1-2|NIBAN2	35.200714571348534	0.6875396545722289	5				NaN	NaN	0	NaN	9132	4858	13988
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13997	39.224	NaN	1885.3	30	0	413.97	0.214	+			26963	LYKACLYAE	9	51	537.2694511221051	NaN	0	537.2689819335938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LYKACLYAE_	ENSG00000196659|ENST00000408939|TTC30B	37.15910966729921	0.2899585034171616	5				NaN	NaN	0	NaN	9134	4861	13996
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13998	39.227	NaN	1464.8	30	0	143.06	0.106			+	27496	MMHVPGKVF	9	58	539.2643539208623	1076.5141549085245	2	539.7666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Oxidation (M)	_M(Oxidation (M))M(Oxidation (M))HVPGKVF_	REV__ENST00000426620.5_1_3:38234779-38271948:+|nuORF	60.29395666154354	0.21116425950210296	5				NaN	NaN	0	NaN	9135	4861	13996
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	13999	39.229	NaN	1391.8	30	0	151.54	0.036			+	-1	FVISLFSCS	9	61	530.2624616779464	1058.5103704226926	2	530.2604370117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_FVISLFSC(Carbamidomethyl (C))S_	REV__ENST00000582491.5_1_17:43697721-43699376:+|nuORF	38.80614096846853	0.43426287593479557	5				NaN	NaN	0	NaN	9136	4861	13996
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14007	39.261	NaN	892.1	30	0	158.08	0.214				-1	 	0	38	475.25197881639036	474.2447023497904	1	475.2507019042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9138	4867	14006
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14008	39.264	NaN	1890.6	30	0	335.37	0.106	+			29028	NSSTISLTSK	10	60	519.2771824763745	1036.539812019549	2	519.2759399414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NSSTISLTSK_	ADAMTS20|p.G1673Wfs*18|1|0.26|ENSG00000173157|chr12:43376632-43376633|-/A|frameshift_variant;ADAMTS20|p.N1722Tfs*17|1|0.48|ENSG00000173157|chr12:43376291-43376291|T/-|frameshift_variant;ENSG00000173157|ENST00000389420|ADAMTS20;nc|ENSG00000173157|P59510|ADAMTS20	43.650786325866115	0.5155049133366767	5				NaN	NaN	0	NaN	9139	4867	14006
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14009	39.266	NaN	1939.1	30	0	350.37	0.106				-1	 	0	53	467.74356391771033	933.4725749022207	2	468.2431335449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9140	4867	14006
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14010	39.268	NaN	2878.1	30	0	655.86	0.035			+	-1	APAGLRGWR	9	50	513.2860134668426	1024.5574740004852	2	513.285400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))APAGLRGWR_	REV__ENST00000588681.5_1_19:11494800-11494992:-|nuORF	26.79610172149135	0.5528238334041078	5				NaN	NaN	0	NaN	9141	4867	14006
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14022	39.317	NaN	2468.2	30	0	236.12	0.214			+	25739	LRVMLAETI	9	66	523.3070209477582	1044.5994889623164	2	523.3057861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LRVMLAETI_	REV__ENST00000249601.8_1_10:49813064-49813103:-|nuORF	29.14955571784316	0.5308295550522326	5				NaN	NaN	0	NaN	9144	4876	14021
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14023	39.321	NaN	1921.6	30	0	148.18	0.036			+	28390	NEMRRKVF	8	59	540.2910733779298	1078.5675938226595	2	540.2897338867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NEMRRKVF_	REV__ENSG00000053900|ENST00000315368|ANAPC4;REV__ENST00000505842.5_1_4:25404608-25415394:+|nuORF;REV__nc|ENSG00000053900|Q9UJX5-2|ANAPC4;REV__nc|ENSG00000053900|Q9UJX5-3|ANAPC4	56.72105179125745	0.5342425954139568	5				NaN	NaN	0	NaN	9145	4876	14021
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14034	39.355	NaN	1035.4	30	0	108.58	0.142			+	33633	RLVHIHSP	8	46	479.78171618115107	NaN	0	479.7813720703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RLVHIHSP_	REV__ENSG00000196118|ENST00000543610|CFAP119;REV__ENST00000544487.5_1_16:30768799-30770507:-|nuORF;REV__nc|ENSG00000196118|A1A4V9-2|CFAP119;REV__nc|ENSG00000196118|A1A4V9-3|CFAP119	40.5726180659479	1.7418937515398478	5				NaN	NaN	0	NaN	9150	4882	14033
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14042	39.388	NaN	2913.3	30	0	199.38	0.144				-1	LTICPIADGP	10	61	528.773393522924	1055.532234112648	2	528.7725219726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_LTIC(Carbamidomethyl (C))PIADGP_	ENSG00000124557|ENST00000684113|BTN1A1	42.396135135203025	0.5270658956260207	5				NaN	NaN	0	NaN	9152	4888	14041
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14046	39.404	NaN	2442.3	30	0	531.49	0.214			+	7506	DGLLPTWLP	9	53	506.2788738465604	1010.5431947599208	2	506.27813720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DGLLPTWLP_	REV__ENST00000541574.1_1_12:122018908-122019040:+|nuORF	45.9519527083369	0.35044536499095585	5				NaN	NaN	0	NaN	9153	4891	14045
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14047	39.408	NaN	1619	30	0	189.36	0.035				-1	 	0	37	336.5349970360798	1006.5831617084394	3	336.5347900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9154	4891	14045
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14052	39.423	NaN	1040.5	30	0	88.081	0.214	+			30243	PSVDPETVL	9	42	478.7512512207031	NaN	0	478.7512512207031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PSVDPETVL_	ENSG00000187231|ENST00000428443|SESTD1;SESTD1|p.G438Vfs*20|2|0.26|ENSG00000187231|chr2:179121901-179121901|T/-|frameshift_variant	37.15910966729921	0.2899585034171616	5				NaN	NaN	0	NaN	9156	4894	14051
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14053	39.427	NaN	1108.6	30	0	178.81	0.033			+	29977	PPAPPPAPGG	10	44	429.2297088409221	NaN	0	429.2294616699219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PPAPPPAPGG_	REV__ENSG00000163348|ENST00000368457|PYGO2;REV__ENSG00000184937|ENST00000452863|WT1;REV__nc|ENSG00000184937|P19544-2|WT1;REV__nc|ENSG00000184937|P19544-3|WT1;REV__nc|ENSG00000184937|P19544-4|WT1;REV__nc|ENSG00000184937|P19544-8|WT1;REV__nc|ENSG00000184937|P19544|WT1;REV__PYGO2|p.F136Sfs*25|1|0.26|ENSG00000163348|chr1:154959595-154959595|G/-|frameshift_variant;REV__PYGO2|p.G109Afs*52|1|0.38|ENSG00000163348|chr1:154959674-154959674|C/-|frameshift_variant;REV__PYGO2|p.Q150Pfs*27|2|0.31|ENSG00000163348|chr1:154959551-154959552|-/G|frameshift_variant;REV__PYGO2|p.Q150Rfs*11|1|0.37|ENSG00000163348|chr1:154959552-154959552|G/-|frameshift_variant	35.200714571348534	0.3845941098745963	5				NaN	NaN	0	NaN	9157	4894	14051
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14057	39.442	NaN	2188.3	30	0	684.06	0.214				-1	 	0	44	440.20464439217704	878.3947358511541	2	440.20330810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9158	4897	14056
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14058	39.445	NaN	1568.1	30	0	346.1	0.031				-1	 	0	36	349.2655653329193	696.5165777326387	2	349.26507568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9159	4897	14056
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14063	39.459	NaN	1412.9	30	0	265.87	0.145				-1	EMFKNMLSI	9	57	572.7721632065455	1143.529773479891	2	572.7709350585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_EM(Oxidation (M))FKNM(Oxidation (M))LSI_	tr|U7SN73|U7SN73_FUSNUAbi-likeproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01691PE=4SV=1	36.446750945000026	0.4619375763483977	5				NaN	NaN	0	NaN	9161	4900	14062
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14069	39.477	NaN	2521.9	30	0	261.91	0.214			+	6830	CIAAPLSLAQ	10	61	522.2810176346436	1042.5474823360871	2	522.2805786132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_C(Carbamidomethyl (C))IAAPLSLAQ_	REV__ENST00000413240.1_1_X:118527189-118527384:-|nuORF	44.116797842482775	0.5112108506279902	5				NaN	NaN	0	NaN	9164	4903	14068
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14070	39.481	NaN	1375.4	30	0	86.515	0.035			+	30186	PSLAPHHKY	9	60	525.2809454492465	1048.5473379652929	2	525.281005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PSLAPHHKY_	REV__ENSG00000215182|ENST00000621226|MUC5AC;REV__MUC5AC|p.L324Cfs*137|1|0.3|ENSG00000215182|chr11:1164280-1164280|G/-|frameshift_variant;REV__MUC5AC|p.R4729Efs*5|1|0.24|ENSG00000215182|chr11:1192325-1192325|C/-|frameshift_variant	40.77816245573522	0.41113185337114944	5				NaN	NaN	0	NaN	9165	4903	14068
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14074	39.495	NaN	2022.6	30	0	225.06	0.142			+	43907	TNLVFIPTA	9	55	488.2785129920913	974.5424730509826	2	488.27777099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TNLVFIPTA_	REV__tr|U7SQ43|U7SQ43_FUSNUGlutaminesynthetaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01684PE=3SV=1	49.44154591367651	0.3095138337212152	5				NaN	NaN	0	NaN	9166	4906	14073
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14079	39.511	NaN	3656.7	30	0	340.62	0.145	+			44361	TSITRNSKNQ	10	65	574.8043361565009	1147.5941193798017	2	574.8048095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSITRNSKNQ_	ENSG00000163689|ENST00000482387|CFAP20DC;ENST00000468415.6_1_3:58855212-58899448:-|nuORF;nc|ENSG00000163689|Q6ZVT6-2|CFAP20DC;nc|ENSG00000163689|Q6ZVT6|CFAP20DC	49.536043120802724	0.461275219792494	5				NaN	NaN	0	NaN	9168	4909	14078
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14087	39.533	NaN	1213.7	30	0	353.58	0.214				-1	 	0	29	339.22157280948187	676.4285926857638	2	339.2208557128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9173	4912	14086
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14088	39.537	NaN	2960.1	30	0	902.93	0.033				-1	 	0	44	433.7539462910661	865.4933396489322	2	433.7528991699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9174	4912	14086
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14093	39.551	NaN	2158.4	30	0	275.05	0.144			+	16645	HHRPTLISL	9	58	537.3149564679399	1072.6153600026796	2	537.3143920898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HHRPTLISL_	REV__ENSG00000086570|ENST00000261800|FAT2;REV__FAT2|p.D4043Tfs*8|1|0.1|ENSG00000086570|chr5:151507544-151507544|C/-|frameshift_variant	49.44154591367651	0.3095138337212152	5				NaN	NaN	0	NaN	9176	4915	14092
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14097	39.567	NaN	2535.9	30	0	627.75	0.214				-1	FCDVCNHM	8	59	549.6930742667662	1097.3715956003323	2	549.6927490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C),Oxidation (M)	_FC(Carbamidomethyl (C))DVC(Carbamidomethyl (C))NHM(Oxidation (M))_	ENSG00000144681|ENST00000273183|STAC;ENST00000476388.5_1_3:36484948-36527316:+|nuORF;ENST00000486143.1_1_3:36422177-36500751:+|nuORF	31.954861631926434	0.7126016770032289	5				NaN	NaN	0	NaN	9177	4918	14096
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14098	39.571	NaN	1638	30	0	295.99	0.106			+	-1	MVCRKHVN	8	57	530.2624616779464	1058.5103704226926	2	530.2613525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))VC(Carbamidomethyl (C))RKHVN_	REV__ENSG00000166501|ENST00000643927|PRKCB;REV__nc|ENSG00000166501|P05771|PRKCB	28.2542754592877	0.7411748056684583	5				NaN	NaN	0	NaN	9178	4918	14096
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14099	39.573	NaN	951.08	30	0	122.11	0.034			+	5814	AVIESVKVV	9	44	472.2944324544758	NaN	0	472.2948303222656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVIESVKVV_	REV__ENSG00000164070|ENST00000296464|HSPA4L	37.15910966729921	0.2899585034171616	5				NaN	NaN	0	NaN	9179	4918	14096
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14111	39.608	NaN	1632.2	30	0	173.42	0.214	+			27538	MPAKKPKR	8	50	478.2968651346194	NaN	0	478.2961120605469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MPAKKPKR_	ENSG00000007202|ENST00000528896|BLTP2;nc|ENSG00000007202|Q14667-2|BLTP2	62.97842346883844	1.7418937515398478	5				NaN	NaN	0	NaN	9185	4924	14110
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14112	39.611	NaN	2345.9	30	0	249.92	0.106				-1	 	0	58	502.23225304339553	1002.4499531535911	2	502.7330627441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9186	4924	14110
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14113	39.613	NaN	1647.3	30	0	258.94	0.106	+			17673	IEKLAVEAL	9	51	493.30113140338386	984.5877098735677	2	493.2998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IEKLAVEAL_	ENSG00000166165|ENST00000348956|CKB	112.2953585152457	0.026655838328212944	5				NaN	NaN	0	NaN	9187	4924	14110
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14114	39.615	NaN	1664	30	0	266.16	0.106			+	37401	SLGETQSTI	9	52	468.23786832380176	NaN	0	468.2375793457031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLGETQSTI_	REV__ENSG00000182511|ENST00000328850|FES;REV__nc|ENSG00000182511|P07332-4|FES	44.377184641726394	0.24544280798894275	5				NaN	NaN	0	NaN	9188	4924	14110
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14115	39.617	NaN	1115.9	30	0	135.74	0.106	+			8647	EDLHRQAKL	9	59	555.3056640625	NaN	0	555.3056640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EDLHRQAKL_	ENSG00000135540|ENST00000343505|NHSL1;ENST00000426841.6_1_6:138768126-138820433:-|nuORF;ENST00000479393.2_1_6:138791728-138820433:-|nuORF;nc|ENSG00000135540|Q5SYE7|NHSL1;NHSL1|p.E1312Gfs*27|1|0.12|ENSG00000135540|chr6:138430422-138430423|-/C|frameshift_variant;NHSL1|p.I1199Ffs*26|1|0.44|ENSG00000135540|chr6:138430763-138430763|G/-|frameshift_variant;NHSL1|p.P932Rfs*70|1|0.13|ENSG00000135540|chr6:138431562-138431562|G/-|frameshift_variant	46.45678178249821	0.2311111838007999	5				NaN	NaN	0	NaN	9189	4924	14110
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14116	39.619	NaN	1163.8	30	0	234.19	0.106			+	51150	YPALLIIPA	9	49	485.80162391984334	969.5886949064867	2	485.79986572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YPALLIIPA_	REV__SLC16A7|p.F267L|1|0.28|ENSG00000118596|chr12:59775096-59775096|C/A|missense_variant	39.021493756699265	0.43173687394350213	5				NaN	NaN	0	NaN	9190	4924	14110
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14117	39.62	NaN	1416	30	0	130.46	0.035			+	28911	NQSLGIYSF	9	63	514.7560055437174	NaN	0	514.7562255859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NQSLGIYSF_	REV__ENSG00000010017|ENST00000011619|RANBP9	39.252832667884924	0.27938773122138094	5				NaN	NaN	0	NaN	9191	4924	14110
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14129	39.657	NaN	1139	30	0	111.81	0.214			+	-1	PLGEQGPLGM	10	44	507.7485254151369	NaN	0	507.7474060058594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_PLGEQGPLGM(Oxidation (M))_	REV__ENSG00000169436|ENST00000303045|COL22A1;REV__ENST00000341807.8_1_8:139601498-139734429:-|nuORF;REV__nc|ENSG00000169436|Q8NFW1-2|COL22A1;REV__nc|ENSG00000169436|Q8NFW1-3|COL22A1	30.503639358989545	0.4000169810673414	5				NaN	NaN	0	NaN	9197	4930	14128
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14130	39.661	NaN	1232.1	30	0	142.72	0.106			+	-1	MGPGGLWGA	9	40	431.1978664684146	NaN	0	431.1976318359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_M(Oxidation (M))GPGGLWGA_	REV__ENST00000472100.5_1_7:1474569-1480903:-|nuORF	49.21078951299608	0.21213183292994464	5				NaN	NaN	0	NaN	9198	4930	14128
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14131	39.663	NaN	1178.8	30	0	143.15	0.106				-1	NIELNKKSM	9	56	546.7886864618035	1091.562819990407	2	546.7880249023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_NIELNKKSM(Oxidation (M))_	ENSG00000100129|ENST00000652021|EIF3L;nc|ENSG00000100129|Q9Y262-2|EIF3L	54.776311868738084	0.25715957988447635	5				NaN	NaN	0	NaN	9199	4930	14128
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14132	39.664	NaN	1352	30	0	110.4	0.106			+	-1	EVCCGKRLM	9	54	556.257878665787	1110.5012043983738	2	556.25634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_EVC(Carbamidomethyl (C))CGKRLM(Oxidation (M))_	REV__ENSG00000185924|ENST00000331238|RTN4RL1	44.116797842482775	0.37197099687881774	5				NaN	NaN	0	NaN	9200	4930	14128
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14133	39.666	NaN	1348.8	30	0	73.191	0.037			+	-1	CTCTTEKVK	9	62	563.7641503835678	NaN	0	563.7633056640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))TC(Carbamidomethyl (C))TTEKVK_	REV__tr|U7T271|U7T271_FUSNUBMCcircularlypermuteddomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00492PE=4SV=1	31.529811441608018	0.3183796599642538	5				NaN	NaN	0	NaN	9201	4930	14128
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14137	39.68	NaN	4732.4	30	0	619.24	0.144	+			40069	STNNWVLIK	9	74	537.8016928229196	1073.588832712639	2	537.801025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STNNWVLIK_	ENSG00000065000|ENST00000643116|AP3D1;nc|ENSG00000065000|O14617-4|AP3D1;nc|ENSG00000065000|O14617|AP3D1	90.60085204095205	0.06317133949006545	5				NaN	NaN	0	NaN	9202	4933	14136
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14141	39.696	NaN	1530.3	30	0	174.63	0.144			+	11481	FNWVVLTQL	9	58	560.312882460284	1118.6112119873678	2	560.3120727539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FNWVVLTQL_	REV__ENSG00000103489|ENST00000261381|XYLT1;REV__XYLT1|p.V724Sfs*55|1|0.34|ENSG00000103489|chr16:17127720-17127720|T/-|frameshift_variant	49.536043120802724	0.308405419312776	5				NaN	NaN	0	NaN	9203	4936	14140
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14146	39.713	NaN	2466.9	30	0	320.54	0.214			+	6829	CHYPFKKLF	9	67	591.8101630498745	1181.605773166549	2	591.8095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CHYPFKKLF_	REV__ENST00000532132.5_1_11:118885772-118886305:+|nuORF	66.42927471994793	0.16001998865088202	5				NaN	NaN	0	NaN	9205	4939	14145
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14147	39.716	NaN	1652.2	30	0	145.98	0.035			+	-1	MGKVGIHNL	9	60	513.7730712890625	NaN	0	513.7730712890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))M(Oxidation (M))GKVGIHNL_	REV__ENSG00000022556|ENST00000448584|NLRP2;REV__ENST00000540597.5_1_19:55501708-55512263:+|nuORF;REV__nc|ENSG00000022556|Q9NX02-2|NLRP2;REV__nc|ENSG00000022556|Q9NX02-4|NLRP2;REV__nc|ENSG00000022556|Q9NX02-5|NLRP2;REV__NLRP2|p.L932M|1|0.32|ENSG00000022556|chr19:54994354-54994354|C/A|missense_variant;REV__NLRP2|p.N1038Tfs*4|2|0.38|ENSG00000022556|chr19:55000816-55000816|A/-|frameshift_variant	38.80614096846853	0.28164298475537564	5				NaN	NaN	0	NaN	9206	4939	14145
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14157	39.749	NaN	3129.6	30	0	393.51	0.214			+	-1	MFEGTHGALAV	11	59	574.7738114511309	1147.5330699690617	2	574.7743530273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))FEGTHGALAV_	REV__ENSG00000144589|ENST00000456909|STK11IP	42.396135135203025	0.5251566046092361	5				NaN	NaN	0	NaN	9210	4945	14156
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14158	39.753	NaN	1641.3	30	0	78.073	0.035	+			29701	PHALHLPAPP	10	62	525.299306522605	1048.5840601120099	2	525.2985229492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PHALHLPAPP_	ENST00000426508.6_2_16:1642283-1652410:-|nuORF	54.76467175910256	0.41345489472286195	5				NaN	NaN	0	NaN	9211	4945	14156
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14163	39.767	NaN	1666.6	30	0	130.97	0.214				-1	FMIYHLIQT	9	64	591.3016552655639	NaN	0	591.3016967773438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_FM(Oxidation (M))IYHLIQT_	ENSG00000149474|ENST00000688188|KAT14;nc|ENSG00000149474|Q9H8E8-2|KAT14;nc|ENSG00000149474|Q9H8E8|KAT14	40.5726180659479	0.27166212580479165	5				NaN	NaN	0	NaN	9213	4948	14162
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14164	39.771	NaN	1569	30	0	384.18	0.035			+	14416	GTAPLVILSH	10	35	336.53427109031725	NaN	0	336.53411865234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTAPLVILSH_	REV__ENST00000444374.1_1_9:92316696-92316852:+|nuORF	21.9598887501803	0.4201028297492154	5				NaN	NaN	0	NaN	9214	4948	14162
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14169	39.786	NaN	2173.7	30	0	504.47	0.215				-1	 	0	42	440.20464439217704	878.3947358511541	2	440.2035827636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9216	4951	14168
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14170	39.789	NaN	2016.1	30	0	178.58	0.106	+			42759	TDRVMTVSF	9	56	528.2645267465643	1054.5145005599286	2	528.2640380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TDRVMTVSF_	ENSG00000116478|ENST00000373548|HDAC1;ENSG00000171720|ENST00000305264|HDAC3;ENSG00000196591|ENST00000519065|HDAC2;ENST00000469550.6_1_5:141001037-141014565:-|nuORF;ENST00000523334.1_1_6:114270238-114277280:-|nuORF;nc|ENSG00000171720|O15379-2|HDAC3;nc|ENSG00000196591|Q92769-3|HDAC2	41.42661286455405	0.403525789677298	5				NaN	NaN	0	NaN	9217	4951	14168
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14171	39.791	NaN	1562.5	30	0	157.28	0.036			+	7653	DKQIGPCLIL	10	60	550.3100704786124	NaN	0	550.3094482421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DKQIGPCLIL_	REV__ENST00000469014.1_1_17:61926730-61934782:+|nuORF	42.86426827375447	0.3507156137006061	5				NaN	NaN	0	NaN	9218	4951	14168
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14181	39.823	NaN	1385.1	30	0	386.12	0.214			+	24894	LKLPGEPQS	9	42	484.7740729474848	NaN	0	484.77362060546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LKLPGEPQS_	REV__AHNAK2|p.E5446Gfs*7|1|0.32|ENSG00000185567|chr14:104939114-104939115|-/C|frameshift_variant;REV__ENSG00000185567|ENST00000333244|AHNAK2;REV__nc|ENSG00000185567|Q8IVF2-2|AHNAK2;REV__nc|ENSG00000185567|Q8IVF2-3|AHNAK2	30.317721548370564	0.32449924987115025	5				NaN	NaN	0	NaN	9222	4957	14180
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14182	39.826	NaN	2270.3	30	0	116.93	0.04			+	-1	FIYDCLKLFF	10	76	683.3504039312148	1364.6862549292296	2	683.8495483398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_FIYDC(Carbamidomethyl (C))LKLFF_	REV__ENST00000482556.5_1_20:47241658-47241766:-|nuORF	40.77816245573522	0.5419747034533848	5				NaN	NaN	0	NaN	9223	4957	14180
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14187	39.841	NaN	3235.8	30	0	708.9	0.214				-1	SISKTPIMK	9	58	510.7909783035132	1019.5674036738264	2	510.79095458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_SISKTPIM(Oxidation (M))K_	ENSG00000165156|ENST00000395571|ZHX1;ZHX1|p.T668Hfs*37|1|0.1|ENSG00000165156|chr8:123253945-123253945|T/-|frameshift_variant;ZHX1|p.T668Nfs*3|1|0.48|ENSG00000165156|chr8:123253944-123253945|-/T|frameshift_variant	71.87747018426188	0.13267044672804276	5				NaN	NaN	0	NaN	9225	4960	14186
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14188	39.845	NaN	2059.2	30	0	204.88	0.106			+	11916	FVAHFIVPE	9	61	529.7874368037909	1057.5603206743817	2	529.7886352539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FVAHFIVPE_	REV__ENSG00000137561|ENST00000260116|TTPA	28.2542754592877	0.5391964248700117	5				NaN	NaN	0	NaN	9226	4960	14186
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14189	39.847	NaN	1265.3	30	0	188.3	0.035	+			761	AEEKLPMTL	9	57	516.277070128502	1030.539587323804	2	516.276123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEEKLPMTL_	ENSG00000165630|ENST00000378572|PRPF18	56.43379154798735	0.2433427591689151	5				NaN	NaN	0	NaN	9227	4960	14186
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14195	39.864	NaN	1932.8	30	0	320.62	0.144	+			29786	PILVPLQEF	9	54	528.3100998274409	1054.6056467216818	2	528.3087158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PILVPLQEF_	ENSG00000185250|ENST00000521072|PPIL6;nc|ENSG00000185250|Q8IXY8-2|PPIL6	38.80614096846853	0.43426287593479557	5				NaN	NaN	0	NaN	9230	4963	14194
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14201	39.882	NaN	1266.7	30	0	182.78	0.214	+			47259	VMSATFAKF	9	52	501.26105384281806	1000.5075547524361	2	501.26007080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VMSATFAKF_	ENSG00000077380|ENST00000397119|DYNC1I2;ENST00000435916.1_1_10:52025510-52026503:+|nuORF;ENST00000479806.1_1_2:172583261-172604396:+|nuORF;nc|ENSG00000077380|Q13409-2|DYNC1I2;nc|ENSG00000077380|Q13409-3|DYNC1I2;nc|ENSG00000077380|Q13409-5|DYNC1I2;nc|ENSG00000077380|Q13409-6|DYNC1I2;nc|ENSG00000077380|Q13409-7|DYNC1I2	54.776311868738084	0.25715957988447635	5				NaN	NaN	0	NaN	9233	4966	14200
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14202	39.885	NaN	1072.3	30	0	95.278	0.106	+			35245	SALGYLHSL	9	52	480.7607966910165	NaN	0	480.76068115234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SALGYLHSL_	ENSG00000118515|ENST00000367858|SGK1;ENST00000367855.7_1_6:134492115-134495951:-|nuORF;ENST00000474427.6_1_6:134493798-134493948:-|nuORF;ENST00000477460.6_1_6:134491408-134493948:-|nuORF;ENST00000524764.1_1_6:134493798-134494280:-|nuORF;nc|ENSG00000118515|O00141-3|SGK1;nc|ENSG00000118515|O00141-4|SGK1;nc|ENSG00000118515|O00141-5|SGK1;nc|ENSG00000118515|O00141|SGK1	42.396135135203025	0.2590952873412954	5				NaN	NaN	0	NaN	9234	4966	14200
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14203	39.887	NaN	1006.3	30	0	197.23	0.033				-1	 	0	33	433.7539462910661	865.4933396489322	2	433.7537841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9235	4966	14200
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14223	39.968	NaN	926.2	30	0	99.869	0.214	+			26118	LSPCSSIGK	9	38	446.23214913444474	NaN	0	446.2320556640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSPCSSIGK_	ENSG00000107263|ENST00000683357|RAPGEF1;nc|ENSG00000107263|Q13905-2|RAPGEF1;nc|ENSG00000107263|Q13905-3|RAPGEF1;nc|ENSG00000107263|Q13905-4|RAPGEF1;nc|ENSG00000107263|Q13905|RAPGEF1	40.77816245573522	0.2702456086868081	5				NaN	NaN	0	NaN	9240	4981	14222
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14224	39.972	NaN	3655.9	30	0	289.74	0.106	+			7740	DMDPRKALL	9	65	529.7874368037909	1057.5603206743817	2	529.7858276367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DMDPRKALL_	ENSG00000198883|ENST00000535214|PNMA5;PNMA5|p.V73Qfs*24|1|0.04|ENSG00000198883|chrX:152991381-152991382|AC/-|frameshift_variant	37.15910966729921	0.4535818937225704	5				NaN	NaN	0	NaN	9241	4981	14222
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14225	39.974	NaN	1025.4	30	0	56.951	0.106	+			45112	TVISGEALGI	10	52	480.27588321110414	958.5372134890083	2	480.27398681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVISGEALGI_	PIR|p.A150T|1|0.16|ENSG00000087842|chrX:15455880-15455880|C/T|missense_variant	49.44154591367651	0.46214596422418036	5				NaN	NaN	0	NaN	9242	4981	14222
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14226	39.976	NaN	1820.9	30	0	273.59	0.037			+	18092	IKPISQEPGPN	11	56	590.323935438117	1178.633317943034	2	590.322021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IKPISQEPGPN_	REV__ENSG00000132549|ENST00000357162|VPS13B;REV__nc|ENSG00000132549|Q7Z7G8-6|VPS13B;REV__nc|ENSG00000132549|Q7Z7G8|VPS13B;REV__VPS13B|p.M3156Ifs*2|1|0.07|ENSG00000132549|chr8:99832427-99832428|-/TA|frameshift_variant;REV__VPS13B|p.S3988Lfs*4|1|0.55|ENSG00000132549|chr8:99875552-99875553|-/C|frameshift_variant;REV__VPS13B|p.S3988Pfs*25|1|0.11|ENSG00000132549|chr8:99875553-99875553|C/-|frameshift_variant	32.75053402867276	0.6462648045997152	5				NaN	NaN	0	NaN	9243	4981	14222
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14237	40.024	NaN	1961.2	30	0	143.78	0.214	+			50979	YILNKRYE	8	66	549.802426261114	1097.5902995890278	2	549.8023681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YILNKRYE_	ENSG00000129347|ENST00000312962|KRI1;ENST00000478863.5_1_19:10666000-10676642:-|nuORF	60.97194046774394	0.49215940876911696	5				NaN	NaN	0	NaN	9245	4990	14236
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14238	40.028	NaN	1250.7	30	0	168.93	0.106			+	26908	LYAKYAQR	8	56	506.78138243668616	NaN	0	506.7822265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LYAKYAQR_	REV__ENSG00000142606|ENST00000378412|MMEL1;REV__ENST00000464195.1_1_1:2523250-2524264:-|nuORF;REV__nc|ENSG00000142606|Q495T6-3|MMEL1	37.028477286268924	1.7418937515398478	5				NaN	NaN	0	NaN	9246	4990	14236
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14239	40.03	NaN	755.81	30	0	130.63	0.035			+	23813	LCQLKKWS	8	52	503.2832336425781	NaN	0	503.2832336425781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LCQLKKWS_	REV__ENSG00000196664|ENST00000380659|TLR7;REV__TLR7|p.N1031Kfs*16|1|0.05|ENSG00000196664|chrX:12888600-12888601|-/ATATCAAGATAAT|frameshift_variant	38.80614096846853	1.7418937515398478	5				NaN	NaN	0	NaN	9247	4990	14236
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14247	40.062	NaN	1513.6	30	0	181.18	0.143	+			5927	AVLFTYVGK	9	51	499.28982836171014	NaN	0	499.29022216796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVLFTYVGK_	ENSG00000117480|ENST00000243167|FAAH;ENST00000468718.5_1_1:46860020-46871294:+|nuORF;ENST00000493735.5_1_1:46860047-46871467:+|nuORF	56.72105179125745	0.16330365735109603	5				NaN	NaN	0	NaN	9249	4996	14246
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14259	40.1	NaN	2243.3	30	0	236.92	0.214	+			27818	MSMLMKIK	8	52	520.2701688313505	1038.5257847295009	2	520.26904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))MSM(Oxidation (M))LMKIK_	ENST00000312938.4_1_3:101369845-101370013:-|nuORF	45.9519527083369	0.6193794311207887	5				NaN	NaN	0	NaN	9255	5002	14258
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14260	40.104	NaN	1653.8	30	0	237.43	0.106	+			17935	IGLTIRNRG	9	50	500.30565046674104	998.5967480002821	2	500.3045654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IGLTIRNRG_	ENSG00000162881|ENST00000378661|OXER1	42.396135135203025	0.392153681582562	5				NaN	NaN	0	NaN	9256	5002	14258
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14261	40.105	NaN	1260.4	30	0	133.04	0.039	+			17767	IESKEFMSSLQ	11	64	649.8179321289062	NaN	0	649.8179321289062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IESKEFMSSLQ_	DSCAML1|p.M1051Wfs*8|3|0.26|ENSG00000177103|chr11:117469970-117469970|C/-|frameshift_variant;DSCAML1|p.P1274Lfs*7|2|0.3|ENSG00000177103|chr11:117450616-117450616|G/-|frameshift_variant;DSCAML1|p.P2046Qfs*45|1|0.5|ENSG00000177103|chr11:117428533-117428533|G/-|frameshift_variant;DSCAML1|p.P778Hfs*36|1|0.26|ENSG00000177103|chr11:117504953-117504953|G/-|frameshift_variant;DSCAML1|p.S2067Afs*24|1|0.48|ENSG00000177103|chr11:117428472-117428472|G/-|frameshift_variant;ENSG00000177103|ENST00000651296|DSCAML1;nc|ENSG00000177103|Q8TD84-2|DSCAML1	40.05817265558897	0.3867246477658885	5				NaN	NaN	0	NaN	9257	5002	14258
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14266	40.12	NaN	1631.3	30	0	579.32	0.214	+			25075	LLLNSGTLAL	10	57	507.81481894472887	1013.6150849562578	2	507.81451416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LLLNSGTLAL_	ENST00000424611.5_1_15:20644728-20658919:-|nuORF;ENST00000428453.5_1_15:20588586-20667676:-|nuORF;ENST00000430598.5_1_15:20613931-20667676:-|nuORF;ENST00000529624.5_3_15:28877823-28916776:+|nuORF;nc|ENSG00000290376|Q9BVR0|HERC2P3	42.396135135203025	0.5270658956260207	5				NaN	NaN	0	NaN	9259	5005	14265
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14267	40.124	NaN	1844.8	30	0	251.25	0.106				-1	 	0	39	441.2594390677332	880.5043252022664	2	441.2590026855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9260	5005	14265
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14268	40.126	NaN	2197.8	30	0	236.06	0.036	+			28327	NEFVHINNL	9	67	550.2808007993395	NaN	0	550.2816162109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NEFVHINNL_	ENSG00000119414|ENST00000373547|PPP6C;nc|ENSG00000119414|O00743-2|PPP6C;nc|ENSG00000119414|O00743-3|PPP6C	61.691277971877994	0.14210560126578747	5				NaN	NaN	0	NaN	9261	5005	14265
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14272	40.14	NaN	1337.5	30	0	110.79	0.143			+	42743	TDLASRAFL	9	52	497.27310091281015	992.5316488924203	2	497.2729187011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TDLASRAFL_	REV__ENSG00000196937|ENST00000359943|FAM3C	64.20726635412375	0.17854274437659667	5				NaN	NaN	0	NaN	9262	5008	14271
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14282	40.175	NaN	3503.3	30	0	454.83	0.214	+			36215	SELRFTQL	8	51	497.27310091281015	992.5316488924203	2	497.271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SELRFTQL_	ENSG00000137857|ENST00000389037|DUOX1;ENSG00000140279|ENST00000389039|DUOX2;ENST00000557893.5_1_15:45440187-45444854:+|nuORF;ENST00000558383.1_1_15:45393877-45400429:-|nuORF;ENST00000561220.6_1_15:45434150-45457096:+|nuORF;nc|ENSG00000137857|Q9NRD9-2|DUOX1;nc|ENSG00000140279|Q9NRD8|DUOX2	64.20726635412375	0.4601301477144759	5				NaN	NaN	0	NaN	9266	5014	14281
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14283	40.179	NaN	2183	30	0	435	0.036			+	34754	RYATVVEPK	9	59	531.802113490834	1061.589674048468	2	531.8005981445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RYATVVEPK_	REV__ENSG00000125414|ENST00000245503|MYH2;REV__MYH2|p.R876Gfs*9|1|0.36|ENSG00000125414|chr17:10531704-10531704|T/-|frameshift_variant;REV__nc|ENSG00000125414|Q9UKX2-2|MYH2	47.95952297671804	0.32689736945648856	5				NaN	NaN	0	NaN	9267	5014	14281
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14289	40.196	NaN	2068.9	30	0	309.32	0.144				-1	LSMFNILKN	9	65	548.2965823157834	1094.5786116983668	2	548.7968139648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LSM(Oxidation (M))FNILKN_	ENST00000378809.8_1_12:70194050-70195428:+|nuORF	51.33545320467046	0.2872990594074956	5				NaN	NaN	0	NaN	9270	5017	14288
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14297	40.216	NaN	1929.4	30	0	347.33	0.214				-1	 	0	51	483.26989731324613	964.5252416932923	2	483.2694396972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9275	5020	14296
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14298	40.219	NaN	1429.5	30	0	292.87	0.035				-1	 	0	33	336.5349242529371	1006.5829433590113	3	336.86865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9276	5020	14296
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14304	40.236	NaN	1283.3	30	0	125.17	0.212			+	-1	QFPTKSCGLLN	11	46	632.8211669921875	NaN	0	632.8211669921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_QFPTKSC(Carbamidomethyl (C))GLLN_	REV__ENSG00000042781|ENST00000307340|USH2A;REV__nc|ENSG00000042781|O75445-2|USH2A;REV__nc|ENSG00000042781|O75445-3|USH2A;REV__USH2A|p.E5096Gfs*82|1|0.44|ENSG00000042781|chr1:215634469-215634470|-/C|frameshift_variant;REV__USH2A|p.F1618Lfs*17|1|0.36|ENSG00000042781|chr1:216089044-216089044|A/-|frameshift_variant;REV__USH2A|p.T3753Lfs*31|1|0.37|ENSG00000042781|chr1:215758727-215758727|T/-|frameshift_variant;REV__USH2A|p.V1147Gfs*56|1|0.38|ENSG00000042781|chr1:216199998-216199999|-/C|frameshift_variant;REV__USH2A|p.W2964Gfs*10|1|0.21|ENSG00000042781|chr1:215845989-215845989|A/-|frameshift_variant	20.83715455343099	0.456735970842152	5				NaN	NaN	0	NaN	9279	5023	14303
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14305	40.239	NaN	1385.4	30	0	144.67	0.106	+			506	ACGVNPVETY	10	56	526.7386156155025	1051.4626782978048	2	526.7386474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ACGVNPVETY_	ENSG00000116791|ENST00000340866|CRYZ;ENST00000370872.7_1_1:75175905-75198642:-|nuORF;nc|ENSG00000116791|Q08257-3|CRYZ	40.77816245573522	0.5419747034533848	5				NaN	NaN	0	NaN	9280	5023	14303
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14306	40.241	NaN	908.66	30	0	174.32	0.106				-1	 	0	34	373.0447161948179	NaN	0	373.0447998046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9281	5023	14303
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14307	40.243	NaN	1343.6	30	0	100.53	0.036			+	24262	LEVGSGGRLSP	11	54	536.2932739257812	NaN	0	536.2932739257812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LEVGSGGRLSP_	REV__ENST00000272117.7_1_1:226822089-226822143:-|nuORF	53.08895987439943	0.2931326677786871	5				NaN	NaN	0	NaN	9282	5023	14303
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14315	40.261	NaN	2435.6	30	0	251.49	0.144	+			49966	WADVRSCII	9	61	531.7719965404167	1061.5294401476333	2	531.7720336914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WADVRSCII_	sp|P16799|CVC1_HCMVACapsidvertexcomponent1OS=Humancytomegalovirus(strainAD169)OX=10360GN=CVC1PE=1SV=1	54.776311868738084	0.25715957988447635	5				NaN	NaN	0	NaN	9287	5026	14314
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14320	40.278	NaN	1124.2	30	0	116.34	0.142			+	37613	SLPTGVQVF	9	46	474.264250900248	946.513948867296	2	474.26300048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLPTGVQVF_	REV__ENSG00000253309|ENST00000681248|SERPINE3;REV__nc|ENSG00000253309|A8MV23|SERPINE3;REV__SERPINE3|p.L270*|2|0.3|ENSG00000253309|chr13:51348315-51348315|C/-|frameshift_variant	44.377184641726394	0.36891676396732553	5				NaN	NaN	0	NaN	9289	5029	14319
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14329	40.3	NaN	451.42	30	0	45.059	0.144	+			28207	NASSVVLGAPL	11	26	343.1975403975179	NaN	0	343.19720458984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NASSVVLGAPL_	ENST00000333235.3_1_Y:27624438-27626982:+|nuORF;ENST00000558282.5_1_15:85734698-85737265:+|nuORF;ENST00000558801.1_1_15:84960100-84962592:-|nuORF;ENST00000560634.1_1_15:84855599-84858179:+|nuORF	19.262678746197807	0.456735970842152	5				NaN	NaN	0	NaN	9295	5032	14328
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14337	40.32	NaN	1908.8	30	0	303.39	0.214			+	27334	MIFHELGFV	9	62	546.7815333940309	1091.5485138548618	2	546.7811889648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MIFHELGFV_	REV__ENST00000402563.5_2_18:13681604-13681643:-|nuORF	42.47446043378293	0.39123495718708534	5				NaN	NaN	0	NaN	9300	5035	14336
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14338	40.324	NaN	838.91	30	0	99.888	0.033			+	18569	ISNWTSAI	8	41	446.231888329125	NaN	0	446.2317810058594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ISNWTSAI_	REV__ENSG00000179698|ENST00000323662|WDR97;REV__ENST00000533108.1_1_8:145164641-145165891:+|nuORF;REV__nc|ENSG00000179698|A6NE52-2|WDR97	63.30626980617807	1.7418937515398478	5				NaN	NaN	0	NaN	9301	5035	14336
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14343	40.339	NaN	1640.8	30	0	149.65	0.144			+	47085	VLKAIMPDY	9	51	525.288254197219	1048.5619554612379	2	525.7866821289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VLKAIMPDY_	REV__ENSG00000078070|ENST00000265594|MCCC1;REV__ENST00000495767.5_1_3:182740340-182790239:-|nuORF;REV__MCCC1|p.V439M|1|0.54|ENSG00000078070|chr3:183039088-183039088|C/T|missense_variant	23.04248740728303	0.5879033540491928	5				NaN	NaN	0	NaN	9303	5038	14342
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14347	40.355	NaN	1434.9	30	0	132.76	0.144			+	18121	ILEPQTVRI	9	59	534.8245718317324	NaN	0	534.8246459960938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ILEPQTVRI_	REV__ENSG00000163930|ENST00000460680|BAP1	45.97224482568171	0.23445038899310136	5				NaN	NaN	0	NaN	9304	5041	14346
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14355	40.389	NaN	4044	30	0	2025	0.214	+			44243	TRVTGTRTAS	10	61	525.288254197219	1048.5619554612379	2	525.2882080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TRVTGTRTAS_	ENST00000394089.6_1_17:38504687-38506114:+|nuORF	39.873155843976775	0.5503138860789152	5				NaN	NaN	0	NaN	9306	5047	14354
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14356	40.392	NaN	1576.6	30	0	200.11	0.037	+			10892	FCPVGQFILQ	10	53	576.2969041122886	NaN	0	576.2977294921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FCPVGQFILQ_	ENSG00000196950|ENST00000359634|SLC39A10;ENST00000430412.5_1_2:196521853-196599762:+|nuORF;nc|ENSG00000196950|Q9ULF5-2|SLC39A10	37.15910966729921	0.3781637092648983	5				NaN	NaN	0	NaN	9307	5047	14354
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14368	40.443	NaN	850.96	30	0	79.033	0.143	+			6901	CLRVMVGVI	9	42	495.2841263182603	NaN	0	495.2854919433594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CLRVMVGVI_	ENSG00000153310|ENST00000694912|CYRIB;nc|ENSG00000153310|Q9NUQ9-2|CYRIB	55.50420428727701	0.16876052142120426	5				NaN	NaN	0	NaN	9310	5056	14367
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14379	40.494	NaN	1804.6	30	0	97.142	0.144	+			18079	IKKLASSLPD	10	68	536.3243316492138	NaN	0	536.3242797851562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IKKLASSLPD_	CEP350|p.I2751Nfs*29|1|0.24|ENSG00000135837|chr1:180094350-180094351|-/A|frameshift_variant;CEP350|p.K1725Nfs*24|1|0.43|ENSG00000135837|chr1:180053928-180053928|A/-|frameshift_variant;CEP350|p.N2889Ifs*10|1|0.38|ENSG00000135837|chr1:180095671-180095671|A/-|frameshift_variant;CEP350|p.N516Ifs*4|1|0.33|ENSG00000135837|chr1:180013997-180013997|A/-|frameshift_variant;CEP350|p.R2078Gfs*6|1|0.43|ENSG00000135837|chr1:180084119-180084119|A/-|frameshift_variant;CEP350|p.Y2613Mfs*8|1|0.07|ENSG00000135837|chr1:180093938-180093938|T/-|frameshift_variant;ENSG00000135837|ENST00000367607|CEP350	58.22992032128504	0.24873293749302264	5				NaN	NaN	0	NaN	9312	5065	14378
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14384	40.51	NaN	991.17	30	0	105.41	0.142	+			35524	SAVGHVFSL	9	43	458.7488331359149	915.4831133386298	2	458.74713134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAVGHVFSL_	ENSG00000164944|ENST00000297591|VIRMA;nc|ENSG00000164944|Q69YN4-2|VIRMA;nc|ENSG00000164944|Q69YN4-3|VIRMA;nc|ENSG00000164944|Q69YN4-4|VIRMA	45.9519527083369	0.35044536499095585	5				NaN	NaN	0	NaN	9314	5068	14383
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14390	40.527	NaN	1742	30	0	407.12	0.214				-1	 	0	55	479.3217524212196	956.6289519092393	2	479.3203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9317	5071	14389
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14391	40.531	NaN	1854.4	30	0	178.43	0.036	+			17469	ICLVTPSMTL	10	53	547.2862331541694	1092.5579133751387	2	547.2849731445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_ICLVTPSM(Oxidation (M))TL_	ENSG00000152684|ENST00000274311|PELO	66.42927471994793	0.3073667423445326	5				NaN	NaN	0	NaN	9318	5071	14389
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14395	40.545	NaN	1051.4	30	0	97.907	0.143	+			8303	EAIRISPTF	9	42	517.2869919190903	NaN	0	517.2879028320312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EAIRISPTF_	ENSG00000147162|ENST00000373719|OGT;nc|ENSG00000147162|O15294-2|OGT;nc|ENSG00000147162|O15294-3|OGT;nc|ENSG00000147162|O15294-4|OGT	74.25504064058377	0.09106938647426577	5				NaN	NaN	0	NaN	9319	5074	14394
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14400	40.562	NaN	1616.6	30	0	289.86	0.142				-1	 	0	48	483.26989731324613	964.5252416932923	2	483.2684020996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9321	5077	14399
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14407	40.581	NaN	1205.3	30	0	96.635	0.144	+			3434	ASQLGIFISK	10	57	532.3114863306746	NaN	0	532.3115234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASQLGIFISK_	ENSG00000120509|ENST00000239666|PDZD11;nc|ENSG00000120509|Q5EBL8-2|PDZD11	36.527901853580055	0.380236283444939	5				NaN	NaN	0	NaN	9325	5080	14406
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14412	40.598	NaN	1599.4	30	0	229.36	0.143	+			47772	VSGYFCKCD	9	57	511.21032085032834	1020.4060887674567	2	511.20989990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSGYFCKCD_	CUBN|p.F2548Sfs*50|1|0.3|ENSG00000107611|chr10:16907570-16907570|A/-|frameshift_variant;CUBN|p.F3041Lfs*38|1|0.06|ENSG00000107611|chr10:16874487-16874488|-/GCTTTCTT|frameshift_variant;CUBN|p.F831Nfs*73|1|0.24|ENSG00000107611|chr10:17071561-17071562|-/TCTTTGAATTT|frameshift_variant;CUBN|p.K1116Nfs*26|1|0.26|ENSG00000107611|chr10:17046076-17046076|T/-|frameshift_variant;CUBN|p.L2960Ffs*41|1|0.39|ENSG00000107611|chr10:16888438-16888442|AAGTC/-|frameshift_variant;CUBN|p.L906Ffs*6|1|0.32|ENSG00000107611|chr10:17068681-17068681|A/-|frameshift_variant;CUBN|p.N1904Tfs*7|1|0.22|ENSG00000107611|chr10:16938985-16938985|T/-|frameshift_variant;CUBN|p.P833Lfs*67|2|0.31|ENSG00000107611|chr10:17071555-17071555|A/-|frameshift_variant;CUBN|p.R520Pfs*17|1|0.17|ENSG00000107611|chr10:17100213-17100214|-/A|frameshift_variant;CUBN|p.V3542Cfs*18|1|0.17|ENSG00000107611|chr10:16828945-16828946|-/A|frameshift_variant;ENSG00000107611|ENST00000377833|CUBN	44.116797842482775	0.37197099687881774	5				NaN	NaN	0	NaN	9327	5083	14411
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14420	40.632	NaN	1342.4	30	0	293.44	0.143				-1	ASMKKVKSL	9	28	336.53496960863185	1006.5830794260955	3	336.53411865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ASM(Oxidation (M))KKVKSL_	ENST00000369426.9_1_1:119575536-119588262:-|nuORF	19.996771675451527	0.6112419832031292	5				NaN	NaN	0	NaN	9329	5089	14419
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14424	40.648	NaN	3447	30	0	529.59	0.214	+			47975	VSPELHEQL	9	62	526.2748916381759	1050.5352303431516	2	526.274169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSPELHEQL_	ENSG00000261150|ENST00000615648|EPPK1;EPPK1|p.G2015Vfs*36|2|0.33|ENSG00000261150|chr8:143867210-143867210|C/-|frameshift_variant;EPPK1|p.Q829Rfs*8|1|0.05|ENSG00000261150|chr8:143870770-143870770|C/-|frameshift_variant;EPPK1|p.Y695Ifs*68|1|0.36|ENSG00000261150|chr8:143871171-143871172|-/T|frameshift_variant	62.107414245175825	0.1960472003779324	5				NaN	NaN	0	NaN	9330	5092	14423
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14425	40.652	NaN	3014.9	30	0	353.22	0.106	+			24737	LHRFSKLA	8	56	486.2934038157946	970.5722546983892	2	486.2915954589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LHRFSKLA_	ENST00000296487.8_2_3:52283629-52283827:+|nuORF	47.91560031466742	0.6071945918984287	5				NaN	NaN	0	NaN	9331	5092	14423
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14426	40.654	NaN	1604.5	30	0	502.18	0.035	+			27353	MINAVTLNN	9	52	495.2587620188073	988.5029711044147	2	495.2572937011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MINAVTLNN_	ENSG00000167306|ENST00000285039|MYO5B;MIB1-MYO5B|1|fusion;nc|ENSG00000167306|Q9ULV0-2|MYO5B;nc|ENSG00000167306|Q9ULV0-3|MYO5B	33.921630207806714	0.48623198279849766	5				NaN	NaN	0	NaN	9332	5092	14423
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14435	40.674	NaN	1322.2	30	0	224.17	0.139				-1	 	0	42	373.0447161948179	NaN	0	373.044677734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9338	5095	14434
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14444	40.708	NaN	984.5	30	0	147.12	0.143			+	-1	LGPLVLCLP	9	45	491.29340207584806	980.5722512184961	2	491.2921447753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_LGPLVLC(Carbamidomethyl (C))LP_	REV__ENST00000378588.4_1_X:37641345-37641393:+|nuORF	21.70233525837049	0.6004277881119521	5				NaN	NaN	0	NaN	9341	5101	14443
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14448	40.725	NaN	1275.2	30	0	126.88	0.214	+			13266	GISPKCVIK	9	56	472.7828057462782	943.5510585593564	2	472.7818908691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GISPKCVIK_	ENSG00000197608|ENST00000594440|ZNF841;ENSG00000204611|ENST00000600228|ZNF616;ZNF616|p.T184Rfs*45|1|0.06|ENSG00000204611|chr19:52116614-52116614|T/-|frameshift_variant;ZNF841|p.Y14Tfs*21|1|0.31|ENSG00000197608|chr19:52067494-52067494|A/-|frameshift_variant	54.776311868738084	0.25715957988447635	5				NaN	NaN	0	NaN	9342	5104	14447
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14449	40.728	NaN	1088.3	30	0	194.1	0.106			+	49130	VVLVLVMKT	9	45	501.3245010531998	1000.6344491731996	2	501.3236083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVLVLVMKT_	REV__ENSG00000152034|ENST00000281806|MCHR2	27.882242232435846	0.5426732730940306	5				NaN	NaN	0	NaN	9343	5104	14447
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14450	40.73	NaN	485.76	30	0	54.427	0.031				-1	 	0	35	347.1994202358492	692.3842875384984	2	347.1983642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9344	5104	14447
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14454	40.746	NaN	1372.3	30	0	230.99	0.144	+			29297	NYKKRKFT	8	59	542.8162956338467	NaN	0	542.8162841796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NYKKRKFT_	ENSG00000181938|ENST00000318129|GINS3;ENST00000567143.1_1_16:58438378-58438630:+|nuORF;nc|ENSG00000181938|Q9BRX5-2|GINS3;nc|ENSG00000181938|Q9BRX5-3|GINS3	33.51558372728122	1.7418937515398478	5				NaN	NaN	0	NaN	9345	5107	14453
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14459	40.762	NaN	5244.8	30	0	330.48	0.214				-1	 	0	61	480.2933818836946	958.5722108341893	2	480.2919006347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9347	5110	14458
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14460	40.766	NaN	3266.6	30	0	498.86	0.106	+			22619	KTTTANLMI	9	58	496.7751123470637	991.5356717609275	2	496.7737121582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTTTANLMI_	ENSG00000185842|ENST00000682510|DNAH14;nc|ENSG00000185842|Q0VDD8-4|DNAH14;nc|ENSG00000185842|Q0VDD8|DNAH14	62.107414245175825	0.1960472003779324	5				NaN	NaN	0	NaN	9348	5110	14458
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14461	40.768	NaN	1277.2	30	0	117.41	0.106	+			21536	KNSRASLRKC	10	58	581.8259887695312	NaN	0	581.8259887695312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KNSRASLRKC_	ENSG00000184313|ENST00000421030|MROH7;nc|ENSG00000184313|Q68CQ1-1|MROH7;nc|ENSG00000184313|Q68CQ1-9|MROH7	27.047317107675042	0.41136583337917604	5				NaN	NaN	0	NaN	9349	5110	14458
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14462	40.769	NaN	1167.2	30	0	136.42	0.033			+	42737	TDKITVIL	8	54	451.7821428093841	901.5497326855682	2	451.78070068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TDKITVIL_	REV__DST|p.K5076Nfs*24|1|0.31|ENSG00000151914|chr6:56472218-56472218|T/-|frameshift_variant;REV__DST|p.T4428Nfs*23|1|0.12|ENSG00000151914|chr6:56497896-56497897|-/T|frameshift_variant;REV__ENSG00000151914|ENST00000680361|DST;REV__nc|ENSG00000151914|Q03001-14|DST;REV__nc|ENSG00000151914|Q03001-8|DST;REV__nc|ENSG00000151914|Q03001|DST	37.15910966729921	0.6739408393984688	5				NaN	NaN	0	NaN	9350	5110	14458
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14466	40.783	NaN	1510.2	30	0	182.85	0.214				-1	HPWARIGTVM	10	56	592.3046264648438	NaN	0	592.3046264648438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_HPWARIGTVM(Oxidation (M))_	ENST00000442832.8_1_19:58341801-58341915:+|nuORF	24.519189625965996	0.41966695327750003	5				NaN	NaN	0	NaN	9351	5113	14465
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14467	40.787	NaN	1975.7	30	0	273.2	0.036			+	11114	FFNGGKLMF	9	60	530.7681279425378	1059.5217029518756	2	531.2686157226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FFNGGKLMF_	REV__ENSG00000186815|ENST00000335509|TPCN1;REV__ENST00000428632.7_1_12:113682520-113726187:+|nuORF;REV__ENST00000552077.5_1_12:113664633-113726187:+|nuORF;REV__nc|ENSG00000186815|Q9ULQ1-2|TPCN1;REV__nc|ENSG00000186815|Q9ULQ1-3|TPCN1	47.91560031466742	0.327412564698279	5				NaN	NaN	0	NaN	9352	5113	14465
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14474	40.818	NaN	2415.3	30	0	516.45	0.214			+	9266	EGYYKRIL	8	65	521.2910482346505	1040.5675435361009	2	521.2901000976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EGYYKRIL_	REV__ANO6|p.L393Wfs*37|1|0.4|ENSG00000177119|chr12:45388169-45388169|T/-|frameshift_variant;REV__ANO6|p.V892*|1|0.32|ENSG00000177119|chr12:45429248-45429248|G/-|frameshift_variant;REV__ENSG00000177119|ENST00000320560|ANO6;REV__ENST00000426898.2_1_12:45610123-45776982:+|nuORF;REV__nc|ENSG00000177119|Q4KMQ2-2|ANO6;REV__nc|ENSG00000177119|Q4KMQ2-3|ANO6;REV__nc|ENSG00000177119|Q4KMQ2-4|ANO6	40.5726180659479	0.6527593143185008	5				NaN	NaN	0	NaN	9353	5119	14473
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14475	40.821	NaN	497.61	30	0	68.45	0.034	+			24275	LEVLVKTL	8	29	457.7989883983079	NaN	0	457.7989807128906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LEVLVKTL_	BAG6|p.A35Pfs*3|1|0.35|ENSG00000204463|chr6:31651661-31651661|C/-|frameshift_variant;ENSG00000204463|ENST00000676615|BAG6;nc|ENSG00000204463|P46379-2|BAG6;nc|ENSG00000204463|P46379-4|BAG6;nc|ENSG00000204463|P46379-5|BAG6;nc|ENSG00000204463|P46379|BAG6	35.61828744233558	1.7418937515398478	5				NaN	NaN	0	NaN	9354	5119	14473
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14484	40.944	NaN	3610	30	0	305.48	0.214				-1	 	0	56	512.2857449895822	1022.5569370459644	2	512.2846069335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9357	5125	14483
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14485	40.948	NaN	1838.3	30	0	226.52	0.036	+			7814	DPQHVVVLY	9	59	535.2886478658676	1068.562742798535	2	535.287841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DPQHVVVLY_	ENSG00000111077|ENST00000314250|TNS2;ENST00000549311.7_1_12:53443879-53456445:+|nuORF;ENST00000549498.5_1_12:53442984-53449630:+|nuORF;nc|ENSG00000111077|Q63HR2-2|TNS2;nc|ENSG00000111077|Q63HR2-4|TNS2;nc|ENSG00000111077|Q63HR2-5|TNS2;nc|ENSG00000111077|Q63HR2-6|TNS2;TNS2|p.G362Rfs*43|1|0.33|ENSG00000111077|chr12:53058087-53058088|-/A|frameshift_variant;TNS2|p.K660Nfs*96|1|0.2|ENSG00000111077|chr12:53059615-53059615|G/-|frameshift_variant;TNS2|p.P495Rfs*25|2|0.33|ENSG00000111077|chr12:53059119-53059119|C/-|frameshift_variant	40.77816245573522	0.41113185337114944	5				NaN	NaN	0	NaN	9358	5125	14483
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14491	40.963	NaN	2199.3	30	0	308.64	0.143				-1	 	0	59	516.736192595127	1031.457832257054	2	516.7357177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9361	5128	14490
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14495	40.979	NaN	1144.4	30	0	254.09	0.143				-1	ASTKKVVMK	9	30	336.53496960863185	1006.5830794260955	3	336.5343322753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ASTKKVVM(Oxidation (M))K_	CFAP47|p.F1567Vfs*4|1|0.31|ENSG00000165164|chrX:36098829-36098830|-/G|frameshift_variant;CFAP47|p.H2345Afs*15|1|0.09|ENSG00000165164|chrX:36236809-36236810|-/A|frameshift_variant;CFAP47|p.K734Nfs*6|1|0.13|ENSG00000165164|chrX:35971909-35971909|A/-|frameshift_variant;CFAP47|p.P2326Tfs*34|1|0.26|ENSG00000165164|chrX:36236751-36236752|-/A|frameshift_variant;ENSG00000165164|ENST00000378653|CFAP47;nc|ENSG00000165164|Q6ZTR5-1|CFAP47;nc|ENSG00000165164|Q6ZTR5-2|CFAP47;nc|ENSG00000165164|Q6ZTR5-6|CFAP47	26.69291269510374	0.5537881896960711	5				NaN	NaN	0	NaN	9362	5131	14494
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14499	40.995	NaN	1245.7	30	0	78.839	0.145			+	-1	LLGPPCFHSE	10	56	578.7756958007812	NaN	0	578.7756958007812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_LLGPPC(Carbamidomethyl (C))FHSE_	REV__ENST00000356607.8_1_1:10690052-10690751:+|nuORF	29.14955571784316	0.4044631218331212	5				NaN	NaN	0	NaN	9363	5134	14498
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14516	41.078	NaN	655.17	30	0	61.075	0.139				-1	 	0	34	347.1994202358492	692.3842875384984	2	347.1986999511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9365	5149	14515
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14521	41.095	NaN	1354.8	30	0	96.098	0.145	+			40954	SVFVETFVQK	10	65	592.3214695366039	NaN	0	592.3216552734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVFVETFVQK_	ENSG00000170786|ENST00000303749|SDR16C5;nc|ENSG00000170786|Q8N3Y7-2|SDR16C5	41.42661286455405	0.3598046802465243	5				NaN	NaN	0	NaN	9367	5152	14520
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14525	41.112	NaN	1593.9	30	0	302.02	0.139				-1	 	0	51	373.0447161948179	NaN	0	373.044677734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9368	5155	14524
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14537	41.164	NaN	624.49	30	0	60.052	0.214			+	26735	LVLNSGLIA	9	38	450.2814146728589	NaN	0	450.28131103515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LVLNSGLIA_	REV__ENSG00000197496|ENST00000359271|SLC2A10	35.61828744233558	0.29773779453147337	5				NaN	NaN	0	NaN	9371	5164	14536
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14538	41.168	NaN	1806.5	30	0	300.33	0.106	+			7316	DASLKTYLY	9	59	537.2803470123321	1072.546141091464	2	537.27978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DASLKTYLY_	ENSG00000186952|ENST00000455884|TMEM232;ENST00000515518.6_1_5:109760554-109978041:-|nuORF;nc|ENSG00000186952|C9JQI7-2|TMEM232;TMEM232|p.N394Ifs*13|3|0.32|ENSG00000186952|chr5:110605204-110605204|T/-|frameshift_variant	49.536043120802724	0.308405419312776	5				NaN	NaN	0	NaN	9372	5164	14536
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14539	41.169	NaN	890.51	30	0	75.894	0.034	+			24253	LETLSRIV	8	45	465.7843017578125	NaN	0	465.7843017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LETLSRIV_	ENSG00000086758|ENST00000262854|HUWE1;nc|ENSG00000086758|Q7Z6Z7-2|HUWE1;nc|ENSG00000086758|Q7Z6Z7-3|HUWE1;sp|F5H8Q3|UL148_HCMVMMembraneproteinUL148OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL148PE=3SV=1	42.47446043378293	1.7418937515398478	5				NaN	NaN	0	NaN	9373	5164	14536
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14546	41.201	NaN	3505	30	0	784.68	0.214			+	51151	YPAMPTGQVGR	11	56	588.7954512649599	1175.5763495967196	2	588.7946166992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YPAMPTGQVGR_	REV__ENST00000497914.5_1_7:43915744-43915975:-|nuORF	33.921630207806714	0.6339809607503234	5				NaN	NaN	0	NaN	9374	5170	14545
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14547	41.204	NaN	1327.5	30	0	114.98	0.037	+			8242	EAFLNNQEY	9	62	564.2538400332579	1126.4931271333157	2	564.2538452148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EAFLNNQEY_	ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1	54.776311868738084	0.25715957988447635	5				NaN	NaN	0	NaN	9375	5170	14545
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14554	41.235	NaN	1541.2	30	0	168.37	0.214	+			44719	TTLKIMSSK	9	55	504.79119685751533	1007.5678407818307	2	504.7898864746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTLKIMSSK_	ENSG00000181143|ENST00000397910|MUC16;MUC16|p.F10843Sfs*11|1|0.22|ENSG00000181143|chr19:8938427-8938427|A/-|frameshift_variant;MUC16|p.H3632Pfs*17|1|0.13|ENSG00000181143|chr19:8965875-8965876|-/G|frameshift_variant;MUC16|p.K6604Rfs*26|1|0.27|ENSG00000181143|chr19:8956959-8956959|T/-|frameshift_variant;MUC16|p.L8270Wfs*63|1|0.04|ENSG00000181143|chr19:8951962-8951963|-/ACCA|frameshift_variant;MUC16|p.N9430Tfs*13|1|0.14|ENSG00000181143|chr19:8948481-8948481|T/-|frameshift_variant;MUC16|p.S4774Ffs*12|1|0.01|ENSG00000181143|chr19:8962451-8962452|-/AC|frameshift_variant;MUC16|p.S6098Wfs*23|1|0.17|ENSG00000181143|chr19:8958477-8958478|-/GGTGACATCTCTTGGCCAACTGACCCTGGACACATCAACC|frameshift_variant;MUC16|p.S6614Lfs*30|1|0.04|ENSG00000181143|chr19:8956931-8956932|-/A|frameshift_variant;MUC16|p.S7713Lfs*5|1|0.45|ENSG00000181143|chr19:8953634-8953634|G/-|frameshift_variant;MUC16|p.T7968Nfs*2|1|0.41|ENSG00000181143|chr19:8952867-8952868|-/T|frameshift_variant;MUC16|p.T8791Qfs*38|1|0.31|ENSG00000181143|chr19:8950403-8950403|G/-|frameshift_variant	31.529811441608018	0.5085848003137583	5				NaN	NaN	0	NaN	9376	5176	14553
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14555	41.239	NaN	1794.9	30	0	229.33	0.036			+	830	AEGEKHLIY	9	52	530.2783824762699	1058.5422120193398	2	530.2776489257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEGEKHLIY_	REV__ENSG00000147255|ENST00000361420|IGSF1;REV__nc|ENSG00000147255|Q8N6C5-2|IGSF1;REV__nc|ENSG00000147255|Q8N6C5-4|IGSF1	47.657333605630114	0.33044192980041115	5				NaN	NaN	0	NaN	9377	5176	14553
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14559	41.253	NaN	1149.2	30	0	142.06	0.215			+	32121	QSKNISVII	9	47	501.3031249631155	NaN	0	501.3028869628906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QSKNISVII_	REV__tr|U7SV17|U7SV17_FUSNUFAD-dependentproteinC-terminaldomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01092PE=4SV=1	42.86426827375447	0.2558691296974908	5				NaN	NaN	0	NaN	9378	5179	14558
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14560	41.257	NaN	577.6	30	0	45.806	0.106	+			5309	ATVLFGIAR	9	33	474.2875061035156	NaN	0	474.2875061035156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATVLFGIAR_	ABCC4|p.L883Wfs*7|2|0.22|ENSG00000125257|chr13:95083178-95083178|A/-|frameshift_variant;ENSG00000125257|ENST00000645237|ABCC4;nc|ENSG00000125257|O15439-2|ABCC4;nc|ENSG00000125257|O15439-3|ABCC4;nc|ENSG00000125257|O15439-4|ABCC4	35.61828744233558	0.29773779453147337	5				NaN	NaN	0	NaN	9379	5179	14558
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14561	41.259	NaN	1572.9	30	0	161.18	0.036	+			19665	KDLSNFSGAI	10	66	526.2757396527443	1050.5369263722885	2	526.2755126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KDLSNFSGAI_	ENSG00000182050|ENST00000611864|MGAT4C;MGAT4C|p.G113Efs*20|1|0.2|ENSG00000182050|chr12:85980390-85980390|T/-|frameshift_variant;MGAT4C|p.L276Yfs*2|1|0.09|ENSG00000182050|chr12:85979899-85979899|A/-|frameshift_variant;MGAT4C|p.N300Mfs*2|1|0.24|ENSG00000182050|chr12:85979827-85979827|T/-|frameshift_variant;nc|ENSG00000182050|Q9UBM8-2|MGAT4C	79.48907831485694	0.19979514868675113	5				NaN	NaN	0	NaN	9380	5179	14558
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14565	41.273	NaN	1093.6	30	0	158.05	0.214	+			44744	TTMHVEVRW	9	41	579.7877859911083	NaN	0	579.788330078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTMHVEVRW_	ENSG00000204290|ENST00000454136|BTNL2;nc|ENSG00000204290|Q9UIR0-1|BTNL2;nc|ENSG00000204290|Q9UIR0-2|BTNL2;nc|ENSG00000204290|Q9UIR0-3|BTNL2	38.80614096846853	0.28164298475537564	5				NaN	NaN	0	NaN	9381	5182	14564
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14566	41.276	NaN	1118.7	30	0	222.67	0.036	+			21095	KKPQRHSLP	9	49	545.8274536132812	NaN	0	545.8274536132812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KKPQRHSLP_	ENSG00000180263|ENST00000343958|FGD6;FGD6|p.S531Vfs*6|1|0.33|ENSG00000180263|chr12:95209693-95209693|T/-|frameshift_variant;nc|ENSG00000180263|Q6ZV73-2|FGD6	17.364965105453717	0.37820932774828947	5				NaN	NaN	0	NaN	9382	5182	14564
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14571	41.292	NaN	1907.8	30	0	362.55	0.214				-1	 	0	47	425.7381010133078	849.4616490934156	2	425.7370300292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9384	5185	14570
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14572	41.295	NaN	1217.4	30	0	252.31	0.035	+			27146	MAVLLKFVS	9	54	504.300091247595	NaN	0	504.78924560546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MAVLLKFVS_	ENSG00000128789|ENST00000317615|PSMG2;ENST00000588824.1_1_18:12724471-12725527:+|nuORF;nc|ENSG00000128789|Q969U7-2|PSMG2	26.69291269510374	0.34280015626154364	5				NaN	NaN	0	NaN	9385	5185	14570
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14581	41.327	NaN	1562.7	30	0	202.81	0.214	+			28379	NELILKTL	8	50	472.29568134662475	942.5768097600495	2	472.2947082519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NELILKTL_	ENSG00000143179|ENST00000367879|UCK2	65.46538089061403	0.44767499471257033	5				NaN	NaN	0	NaN	9388	5191	14580
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14582	41.331	NaN	1185.1	30	0	267.66	0.035				-1	ASMKKVKSL	9	27	336.5342822480886	NaN	0	336.53424072265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_ASM(Oxidation (M))KKVKSL_	ENST00000369426.9_1_1:119575536-119588262:-|nuORF	20.94693142431847	0.3660861156085067	5				NaN	NaN	0	NaN	9389	5191	14580
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14589	41.362	NaN	1302.9	30	0	382.59	0.143	+			29611	PFWAGFSVL	9	46	512.2687088624707	1022.5228647917414	2	512.2684936523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PFWAGFSVL_	ENSG00000104059|ENST00000261275|ENTREP2	35.200714571348534	0.47427825964483533	5				NaN	NaN	0	NaN	9390	5197	14588
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14596	41.396	NaN	1830.5	30	0	195.59	0.143	+			41252	SVLGQLGITK	10	60	508.3118535368072	1014.6091541404144	2	508.3109130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVLGQLGITK_	ENSG00000197249|ENST00000393087|SERPINA1;ENST00000489769.1_1_14:94844788-94846995:-|nuORF;nc|ENSG00000197249|P01009-2|SERPINA1;SERPINA1|p.L377*|1|0.19|ENSG00000197249|chr14:94378576-94378576|A/-|frameshift_variant;SERPINA1|p.T369Rfs*3|1|0.05|ENSG00000197249|chr14:94378605-94378606|-/CCCC|frameshift_variant	61.418915157473144	0.35293535625434735	5				NaN	NaN	0	NaN	9391	5203	14595
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14603	41.428	NaN	761.52	30	0	53.159	0.214				-1	 	0	38	347.1994202358492	692.3842875384984	2	347.1991271972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9392	5209	14602
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14604	41.432	NaN	1399.6	30	0	182.65	0.036	+			6953	CPLCWGERK	9	63	546.2612310548562	1090.5079091765124	2	546.2593383789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_CPLCWGERK_	ENST00000295400.10_1_2:70677022-70677121:-|nuORF	35.61828744233558	0.47037581924408073	5				NaN	NaN	0	NaN	9393	5209	14602
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14609	41.447	NaN	1288	30	0	88.111	0.144	+			46408	VENNLILKM	9	61	537.3065247044692	1072.5984964757383	2	537.305419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VENNLILKM_	ENSG00000140992|ENST00000342085|PDPK1;nc|ENSG00000140992|O15530-2|PDPK1;nc|ENSG00000140992|O15530-3|PDPK1;nc|ENSG00000140992|O15530-4|PDPK1	52.936696900407355	0.27249468807391813	5				NaN	NaN	0	NaN	9395	5212	14608
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14617	41.481	NaN	1941.9	30	0	289.97	0.214				-1	 	0	47	462.318934529558	922.6233161259161	2	462.3175964355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9397	5218	14616
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14618	41.485	NaN	1214.6	30	0	130.55	0.035	+			15343	GTVLFEIAK	9	54	489.2869917175581	NaN	0	489.2876281738281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTVLFEIAK_	ENSG00000175970|ENST00000344651|UNC119B	62.107414245175825	0.1403307765918332	5				NaN	NaN	0	NaN	9398	5218	14616
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14629	41.533	NaN	1334.6	30	0	187.29	0.144	+			23296	KYNANFVTF	9	56	552.2798712604146	NaN	0	552.2791748046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KYNANFVTF_	ENSG00000173120|ENST00000529006|KDM2A;ENST00000527157.1_1_11:66888787-66947744:+|nuORF;KDM2A|p.G855Efs*24|2|0.34|ENSG00000173120|chr11:67250589-67250589|G/-|frameshift_variant;KDM2A|p.L300Cfs*10|1|0.4|ENSG00000173120|chr11:67219340-67219340|T/-|frameshift_variant;KDM2A|p.R834Vfs*3|1|0.38|ENSG00000173120|chr11:67250525-67250525|C/-|frameshift_variant;nc|ENSG00000173120|Q9Y2K7-3|KDM2A	34.172542307311794	0.30503706118289736	5				NaN	NaN	0	NaN	9400	5227	14628
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14644	41.602	NaN	1780.8	30	0	245.42	0.144			+	13311	GKGLRQWTI	9	61	529.8094121516265	1057.6042713700529	2	529.8091430664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GKGLRQWTI_	REV__ENSG00000131269|ENST00000373394|ABCB7;REV__nc|ENSG00000131269|O75027-2|ABCB7;REV__nc|ENSG00000131269|O75027-3|ABCB7	41.42661286455405	0.403525789677298	5				NaN	NaN	0	NaN	9403	5239	14643
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14648	41.618	NaN	1034.2	30	0	109.4	0.215				-1	 	0	35	373.0447161948179	NaN	0	373.04461669921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9404	5242	14647
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14649	41.622	NaN	1275.8	30	0	180	0.106	+			36273	SENVLQVHL	9	55	519.7821815936445	NaN	0	519.7821044921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SENVLQVHL_	ENSG00000115947|ENST00000392857|ORC4;ENST00000495601.1_1_2:148716324-148733527:-|nuORF;ENST00000496670.6_1_2:148709144-148730385:-|nuORF;nc|ENSG00000115947|O43929-2|ORC4;nc|ENSG00000115947|O43929-3|ORC4	37.81151784470057	0.28666463014928195	5				NaN	NaN	0	NaN	9405	5242	14647
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14650	41.624	NaN	651.65	30	0	95.895	0.034				-1	PVPRVPVGM	9	38	484.27204270572446	966.5295324782489	2	484.270751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_PVPRVPVGM(Oxidation (M))_	ENST00000505878.4_2_4:108955531-108955639:+|nuORF	31.954861631926434	0.5046124803899898	5				NaN	NaN	0	NaN	9406	5242	14647
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14663	41.672	NaN	1309.1	30	0	274.86	0.143				-1	ASTKKVVMK	9	27	336.53448486328125	NaN	0	336.53448486328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ASTKKVVM(Oxidation (M))K_	CFAP47|p.F1567Vfs*4|1|0.31|ENSG00000165164|chrX:36098829-36098830|-/G|frameshift_variant;CFAP47|p.H2345Afs*15|1|0.09|ENSG00000165164|chrX:36236809-36236810|-/A|frameshift_variant;CFAP47|p.K734Nfs*6|1|0.13|ENSG00000165164|chrX:35971909-35971909|A/-|frameshift_variant;CFAP47|p.P2326Tfs*34|1|0.26|ENSG00000165164|chrX:36236751-36236752|-/A|frameshift_variant;ENSG00000165164|ENST00000378653|CFAP47;nc|ENSG00000165164|Q6ZTR5-1|CFAP47;nc|ENSG00000165164|Q6ZTR5-2|CFAP47;nc|ENSG00000165164|Q6ZTR5-6|CFAP47	19.996771675451527	0.3693019437812985	5				NaN	NaN	0	NaN	9410	5251	14662
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14688	41.802	NaN	979.54	30	0	68.03	0.214				-1	MCGTISVVK	9	48	497.7547535703267	NaN	0	497.75506591796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_MC(Carbamidomethyl (C))GTISVVK_	ENST00000605035.5_1_6:348606-348948:+|nuORF	58.78195531508484	0.1545138866451181	5				NaN	NaN	0	NaN	9411	5275	14687
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14689	41.805	NaN	1235.7	30	0	85.511	0.035	+			49700	VYKVVGNLL	9	55	502.8114246197711	1003.6082963063423	2	503.3119812011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYKVVGNLL_	ENSG00000183856|ENST00000361170|IQGAP3;IQGAP3|p.Q1205Sfs*31|1|0.4|ENSG00000183856|chr1:156534628-156534628|G/-|frameshift_variant	99.37495909608758	0.03983967222258828	5				NaN	NaN	0	NaN	9412	5275	14687
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14714	41.934	NaN	692.48	30	0	82.375	0.214	+			51075	YLPAGQSVL	9	34	474.26297827500144	NaN	0	474.26263427734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YLPAGQSVL_	ENSG00000167085|ENST00000300408|PHB1;nc|ENSG00000167085|P35232-2|PHB1	39.252832667884924	0.27938773122138094	5				NaN	NaN	0	NaN	9413	5299	14713
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14715	41.938	NaN	506.72	30	0	41.11	0.034	+			32451	QVKGRRVV	8	38	471.3046542386417	NaN	0	471.304443359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QVKGRRVV_	CON__Q3SX14;ENSG00000148180|ENST00000432226|GSN;ENST00000485767.1_1_9:124072835-124073156:+|nuORF;nc|ENSG00000148180|P06396-3|GSN;nc|ENSG00000148180|P06396-4|GSN;nc|ENSG00000148180|P06396|GSN	25.450171626174864	1.7418937515398478	5				NaN	NaN	0	NaN	9414	5299	14713
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14726	41.986	NaN	1956.8	30	0	496.47	0.143	+			14134	GSMATAPQGL	10	45	466.7296392616133	931.4447255900266	2	466.7287902832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSMATAPQGL_	nc|ENSG00000221819|O95177|GAS8-AS1	42.86426827375447	0.522752283233888	5				NaN	NaN	0	NaN	9416	5308	14725
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14731	42.003	NaN	588.6	30	0	58.591	0.214	+			30045	PPVAVPGG	8	36	347.1985958678132	NaN	0	347.1983947753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PPVAVPGG_	ARID1B|p.K1095Rfs*9|1|0.39|ENSG00000049618|chr6:157181155-157181156|AA/-|frameshift_variant;ARID1B|p.P722Hfs*10|1|0.36|ENSG00000049618|chr6:157084826-157084826|C/-|frameshift_variant;ENSG00000049618|ENST00000636930|ARID1B;nc|ENSG00000049618|Q8NFD5-1|ARID1B;nc|ENSG00000049618|Q8NFD5-2|ARID1B;nc|ENSG00000049618|Q8NFD5|ARID1B	16.704963439144045	1.7418937515398478	5				NaN	NaN	0	NaN	9418	5311	14730
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14732	42.007	NaN	1354.5	30	0	187.95	0.037			+	51520	YVSLATVGDEA	11	59	562.778286761241	NaN	0	562.7784423828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YVSLATVGDEA_	REV__ENSG00000160410|ENST00000291842|SHKBP1;REV__SHKBP1|p.S624Ifs*31|1|0.32|ENSG00000160410|chr19:40590830-40590831|-/A|frameshift_variant	29.170058357718403	0.43541742044178583	5				NaN	NaN	0	NaN	9419	5311	14730
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14744	42.054	NaN	1214.6	30	0	211.12	0.143				-1	ASMKKVKSL	9	29	336.53433403153804	NaN	0	336.53436279296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ASM(Oxidation (M))KKVKSL_	ENST00000369426.9_1_1:119575536-119588262:-|nuORF	20.94693142431847	0.3660861156085067	5				NaN	NaN	0	NaN	9422	5320	14743
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14788	42.272	NaN	899.55	30	0	130.86	0.214			+	33499	RKKRTCPQ	8	44	508.7933239399925	1015.572094946785	2	508.791748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RKKRTCPQ_	REV__ENST00000560813.2_1_15:62352823-62352949:+|nuORF	30.503639358989545	0.7238069182250283	5				NaN	NaN	0	NaN	9427	5359	14787
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14789	42.275	NaN	1272.5	30	0	163.5	0.035	+			46588	VFPPYVLR	8	53	495.7922687294663	NaN	0	495.79180908203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VFPPYVLR_	DICER1|p.K1486Nfs*4|1|0.23|ENSG00000100697|chr14:95096462-95096462|T/-|frameshift_variant;DICER1|p.S1473Ffs*4|1|0.2|ENSG00000100697|chr14:95096502-95096503|-/A|frameshift_variant;ENSG00000100697|ENST00000343455|DICER1;nc|ENSG00000100697|Q9UPY3-2|DICER1	35.200714571348534	1.7418937515398478	5				NaN	NaN	0	NaN	9428	5359	14787
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14810	42.356	NaN	2374.1	30	0	238.41	0.144	+			37239	SKSLVMELR	9	57	539.7994238409711	1077.5842947487422	2	539.7979125976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_SKSLVM(Oxidation (M))ELR_	DNAH10|p.D3416Mfs*54|1|0.28|ENSG00000197653|chr12:123914871-123914871|C/-|frameshift_variant;DNAH10|p.E1360*|1|0.18|ENSG00000197653|chr12:123830579-123830580|-/T|frameshift_variant;DNAH10|p.K1737Nfs*15|2|0.42|ENSG00000197653|chr12:123845799-123845799|A/-|frameshift_variant;DNAH10|p.N2655Kfs*10|1|0.19|ENSG00000197653|chr12:123877852-123877853|-/A|frameshift_variant;DNAH10|p.N3499Ifs*2|1|0.14|ENSG00000197653|chr12:123916578-123916578|A/-|frameshift_variant;DNAH10|p.P1206Lfs*12|1|0.08|ENSG00000197653|chr12:123819219-123819219|C/-|frameshift_variant;DNAH10|p.Q2965Kfs*11|1|0.57|ENSG00000197653|chr12:123894687-123894687|C/-|frameshift_variant;ENSG00000197653|ENST00000673944|DNAH10;nc|ENSG00000197653|Q8IVF4|DNAH10	60.11826168202944	0.21262886028301267	5				NaN	NaN	0	NaN	9434	5374	14809
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14818	42.389	NaN	1250.3	30	0	169.49	0.144	+			50740	YEKGCEFVL	9	57	544.2608540658518	1086.5071551985036	2	544.2601318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YEKGCEFVL_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	40.77816245573522	0.41113185337114944	5				NaN	NaN	0	NaN	9436	5380	14817
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14826	42.422	NaN	741.38	30	0	88.512	0.214	+			34920	SAAFPGASL	9	36	410.71343994140625	NaN	0	410.71343994140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAAFPGASL_	ENSG00000183283|ENST00000412716|DAZAP2;nc|ENSG00000183283|Q15038-2|DAZAP2;nc|ENSG00000183283|Q15038-5|DAZAP2	42.396135135203025	0.2590952873412954	5				NaN	NaN	0	NaN	9438	5386	14825
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14827	42.425	NaN	1266.3	30	0	96.904	0.106				-1	 	0	57	585.2898038109449	584.2825273443449	1	586.2935791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9439	5386	14825
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14828	42.427	NaN	600.82	30	0	70.46	0.106	+			51069	YLLTLAAAN	9	36	475.27154541015625	NaN	0	475.27154541015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YLLTLAAAN_	ENSG00000137478|ENST00000409418|FCHSD2;FCHSD2|p.L287Cfs*26|1|0.21|ENSG00000137478|chr11:72902607-72902607|A/-|frameshift_variant;nc|ENSG00000137478|O94868-2|FCHSD2;nc|ENSG00000137478|O94868-3|FCHSD2	21.9598887501803	0.3626577482100488	5				NaN	NaN	0	NaN	9440	5386	14825
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14829	42.429	NaN	1310.9	30	0	257.51	0.035	+			25567	LQALHEAIL	9	32	336.5343357828586	NaN	0	336.86871337890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LQALHEAIL_	ENSG00000021762|ENST00000263650|OSBPL5;ENST00000498536.5_1_11:3109437-3111932:-|nuORF;nc|ENSG00000021762|Q9H0X9-2|OSBPL5;nc|ENSG00000021762|Q9H0X9-3|OSBPL5	19.359975847455235	0.3714571876404798	5				NaN	NaN	0	NaN	9441	5386	14825
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14836	42.46	NaN	1701.7	30	0	284.8	0.143	+			41583	SVQGFFLNH	9	55	524.7655900396627	1047.5166271461253	2	524.7648315429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVQGFFLNH_	ENSG00000180011|ENST00000322342|PTGR3;nc|ENSG00000180011|Q8N4Q0-2|PTGR3	64.20726635412375	0.17854274437659667	5				NaN	NaN	0	NaN	9442	5392	14835
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14840	42.476	NaN	1004.8	30	0	87.752	0.144	+			29601	PFSFSVLFY	9	46	553.7809333072048	1105.5473136812095	2	553.7785034179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PFSFSVLFY_	ENST00000546676.1_1_12:50529254-50529473:-|nuORF	31.954861631926434	0.5046124803899898	5				NaN	NaN	0	NaN	9443	5395	14839
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14847	42.509	NaN	1581.5	30	0	216.27	0.142	+			46124	VDIWAAGVI	9	38	472.2653316331268	942.5161103330536	2	472.263916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VDIWAAGVI_	ENSG00000133083|ENST00000360631|DCLK1;ENSG00000170390|ENST00000296550|DCLK2;nc|ENSG00000133083|O15075-2|DCLK1;nc|ENSG00000133083|O15075-3|DCLK1;nc|ENSG00000133083|O15075-4|DCLK1;nc|ENSG00000170390|Q8N568-2|DCLK2;nc|ENSG00000170390|Q8N568-3|DCLK2	31.954861631926434	0.5046124803899898	5				NaN	NaN	0	NaN	9444	5401	14846
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14851	42.526	NaN	945.74	30	0	160.68	0.144	+			49656	VYINTAQEF	9	44	542.7708447827349	1083.5271366322697	2	542.7711791992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYINTAQEF_	ENSG00000095059|ENST00000210060|DHPS;ENST00000600510.1_1_19:12786654-12786995:-|nuORF;nc|ENSG00000095059|P49366-3|DHPS	72.87924865735499	0.12833875048249987	5				NaN	NaN	0	NaN	9445	5404	14850
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14869	42.608	NaN	967.92	30	0	82.379	0.142	+			12635	GEIIGVKVL	9	39	464.29836620296084	926.5821794727217	2	464.2974853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEIIGVKVL_	ENSG00000180817|ENST00000373232|PPA1	45.97224482568171	0.3502073465782774	5				NaN	NaN	0	NaN	9448	5419	14868
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14873	42.625	NaN	1601.7	30	0	177.07	0.213			+	-1	QNYEFMVFN	9	56	604.256527789915	1206.49850264663	2	604.25537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_QNYEFM(Oxidation (M))VFN_	REV__tr|U7T073|U7T073_FUSNUPhenylalanine--tRNAligasebetasubunitOS=FusobacteriumnucleatumCTI-5OX=1316586GN=pheTPE=3SV=1	32.81241826257853	0.4965981579233955	5				NaN	NaN	0	NaN	9449	5422	14872
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14874	42.628	NaN	1277	30	0	389.63	0.106				-1	RLLLEMAL	8	39	487.78906245703774	973.5635719808755	2	487.78729248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_RLLLEM(Oxidation (M))AL_	ENST00000521033.5_1_5:160061154-160212677:-|nuORF	25.450171626174864	0.7628259754767981	5				NaN	NaN	0	NaN	9450	5422	14872
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14875	42.63	NaN	1113.6	30	0	116.56	0.035	+			49527	VYAILTHGI	9	48	493.7875374844444	NaN	0	493.7876892089844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYAILTHGI_	ENSG00000101911|ENST00000380668|PRPS2;ENSG00000147224|ENST00000372435|PRPS1;ENSG00000229937|ENST00000506618|PRPS1L1;nc|ENSG00000101911|P11908-2|PRPS2;nc|ENSG00000147224|P60891-2|PRPS1;PRPS1|p.T242I|1|0.5|ENSG00000147224|chrX:107647626-107647626|C/T|missense_variant	76.84663266511073	0.08218905260741291	5				NaN	NaN	0	NaN	9451	5422	14872
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14879	42.645	NaN	581.52	30	0	116.95	0.214			+	26285	LSTSGDQH	8	27	422.6927679913463	NaN	0	422.6927490234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSTSGDQH_	REV__DCLK1|p.K527T|1|0.12|ENSG00000133083|chr13:35810943-35810943|T/G|missense_variant	38.80614096846853	1.7418937515398478	5				NaN	NaN	0	NaN	9452	5425	14878
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14880	42.648	NaN	888.75	30	0	90.022	0.035			+	10180	ETAIIIQLL	9	49	507.31311260535557	NaN	0	507.3137512207031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ETAIIIQLL_	REV__ENSG00000111291|ENST00000228887|GPRC5D;REV__nc|ENSG00000111291|Q9NZD1-2|GPRC5D;REV__nc|ENSG00000111291|Q9NZD1-3|GPRC5D	42.396135135203025	0.2590952873412954	5				NaN	NaN	0	NaN	9453	5425	14878
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14885	42.664	NaN	1304	30	0	401.01	0.143	+			36385	SETITQLNL	9	45	509.77303121237225	1017.5315094915445	2	509.77191162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SETITQLNL_	ENSG00000145604|ENST00000274255|SKP2;nc|ENSG00000145604|Q13309-2|SKP2;nc|ENSG00000145604|Q13309-4|SKP2	47.657333605630114	0.33044192980041115	5				NaN	NaN	0	NaN	9455	5428	14884
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14898	42.73	NaN	1260.1	30	0	97.716	0.214			+	30050	PPVPVAAS	8	52	369.21289064123204	736.4112283492641	2	369.21197509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PPVPVAAS_	REV__ENSG00000166783|ENST00000396368|MARF1;REV__ENST00000552771.5_1_16:15690552-15694435:-|nuORF;REV__nc|ENSG00000166783|Q9Y4F3-3|MARF1;REV__nc|ENSG00000166783|Q9Y4F3-4|MARF1;REV__nc|ENSG00000166783|Q9Y4F3-5|MARF1	21.70233525837049	0.7917639344264583	5				NaN	NaN	0	NaN	9456	5440	14897
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14899	42.733	NaN	1417.7	30	0	225.74	0.036			+	37213	SKKKHFKY	8	49	533.3149737625577	1064.6153945919152	2	533.3140258789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SKKKHFKY_	REV__ENSG00000138382|ENST00000260953|METTL5	42.396135135203025	0.6414440140393314	5				NaN	NaN	0	NaN	9457	5440	14897
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14930	42.878	NaN	1190.1	30	0	73.126	0.214			+	26652	LVELPKPAP	9	48	482.2972717285156	NaN	0	482.2972717285156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LVELPKPAP_	REV__ENST00000301061.8_2_12:49364122-49365273:-|nuORF	37.15910966729921	0.2899585034171616	5				NaN	NaN	0	NaN	9461	5467	14929
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14931	42.881	NaN	1684.8	30	0	151.98	0.034			+	45852	VALLLFWI	8	47	487.80697040406505	973.5993878749301	2	487.8055725097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VALLLFWI_	REV__ENSG00000239857|ENST00000265857|GET4;REV__ENST00000464468.1_1_7:931948-933548:+|nuORF;REV__nc|ENSG00000239857|Q7L5D6-2|GET4	43.626045697637714	0.6338121648150432	5				NaN	NaN	0	NaN	9462	5467	14929
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14935	42.895	NaN	1642	30	0	367.67	0.141				-1	 	0	41	449.3115764241638	896.6085999151276	2	449.31036376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9463	5470	14934
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14943	42.929	NaN	1177.7	30	0	192.46	0.142	+			23824	LCSLKFTL	8	47	462.76447823225493	923.5144035313099	2	463.2645263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LCSLKFTL_	ENST00000597991.1_1_4:39482082-39482382:+|nuORF	49.44154591367651	0.597725784090933	5				NaN	NaN	0	NaN	9465	5476	14942
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14954	42.978	NaN	1518.1	30	0	287.88	0.214	+			43347	TGATLYLLR	9	35	336.5342917129762	NaN	0	336.5345458984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TGATLYLLR_	ENSG00000189043|ENST00000339600|NDUFA4;ENST00000486007.1_1_7:10977674-10979684:-|nuORF;NDUFA4|p.A37T|1|0.4|ENSG00000189043|chr7:10938830-10938830|C/T|missense_variant	18.324413293986947	0.3749620627292244	5				NaN	NaN	0	NaN	9467	5485	14953
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14955	42.982	NaN	929.41	30	0	97.283	0.035	+			25231	LNAYSNLSL	9	41	497.7654993756909	993.5164458181819	2	497.7650146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LNAYSNLSL_	ENSG00000149289|ENST00000278590|ZC3H12C;nc|ENSG00000149289|Q9C0D7-2|ZC3H12C	49.44154591367651	0.3095138337212152	5				NaN	NaN	0	NaN	9468	5485	14953
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14968	43.045	NaN	1087.9	30	0	152.33	0.214	+			2547	AQAQEVFFLK	10	52	590.8237753053	1179.6329976774	2	590.8223266601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AQAQEVFFLK_	ENSG00000170248|ENST00000307296|PDCD6IP;ENST00000459659.1_1_3:33863478-33868168:+|nuORF;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP;nc|ENSG00000170248|Q8WUM4-3|PDCD6IP;PDCD6IP|p.F351Nfs*37|1|0.08|ENSG00000170248|chr3:33836259-33836260|-/AATCC|frameshift_variant	49.536043120802724	0.461275219792494	5				NaN	NaN	0	NaN	9469	5497	14967
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14969	43.049	NaN	980.69	30	0	63.169	0.037	+			51606	YYQSSVQYL	9	57	575.7758218414333	NaN	0	575.7752685546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YYQSSVQYL_	ENSG00000164818|ENST00000297440|DNAAF5;nc|ENSG00000164818|Q86Y56-2|DNAAF5;nc|ENSG00000164818|Q86Y56-3|DNAAF5	58.22992032128504	0.15686832049467786	5				NaN	NaN	0	NaN	9470	5497	14967
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	14995	43.176	NaN	2191	30	0	261.88	0.144	+			21930	KRYKSAAVAA	10	57	532.814177597855	1063.6138022625098	2	532.8134155273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KRYKSAAVAA_	ENSG00000168671|ENST00000282507|UGT3A2;nc|ENSG00000168671|Q3SY77-2|UGT3A2	34.172542307311794	0.6007644933930345	5				NaN	NaN	0	NaN	9472	5521	14994
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15040	43.387	NaN	2474.6	30	0	424.51	0.144	+			414	AASYSKNVVR	10	59	547.8007232593056	1093.5868935854112	2	547.800048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AASYSKNVVR_	ENST00000580296.5_3_17:80417304-80422202:+|nuORF	36.446750945000026	0.5818864909973037	5				NaN	NaN	0	NaN	9478	5560	15039
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15048	43.42	NaN	2697.2	30	0	402.9	0.138				-1	 	0	47	338.1943203650904	674.3740877969808	2	338.1935119628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9480	5566	15047
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15052	43.437	NaN	1486.4	30	0	1041.1	0.139				-1	 	0	30	346.7074878639614	691.4004227947228	2	346.70654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9481	5569	15051
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15056	43.454	NaN	924.21	30	0	44.781	0.14	+			32730	RAPAPRGG	8	43	391.2250217277371	NaN	0	391.224853515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RAPAPRGG_	ENSG00000261308|ENST00000618634|FIGNL2	28.2542754592877	1.7418937515398478	5				NaN	NaN	0	NaN	9482	5572	15055
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15072	43.52	NaN	1364.9	30	0	269.71	0.214	+			39228	STAIQELFK	9	55	518.7887782611098	1035.5630035890194	2	518.7882080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STAIQELFK_	ENSG00000104833|ENST00000264071|TUBB4A;ENSG00000137267|ENST00000333628|TUBB2A;ENSG00000137285|ENST00000259818|TUBB2B;ENSG00000176014|ENST00000317702|TUBB6;ENSG00000188229|ENST00000340384|TUBB4B;ENSG00000196230|ENST00000327892|TUBB;ENSG00000258947|ENST00000315491|TUBB3;ENST00000417736.2_1_18:12308439-12326126:+|nuORF;ENST00000518096.1_1_8:30210219-30210855:+|nuORF;ENST00000604929.1_1_9:140136931-140138005:+|nuORF;nc|ENSG00000258947|Q13509-2|TUBB3	68.84614121027924	0.14577793175421136	5				NaN	NaN	0	NaN	9486	5584	15071
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15073	43.524	NaN	1292.2	30	0	88.103	0.106	+			14284	GSVLLFVTK	9	48	482.2974133559707	NaN	0	482.29766845703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSVLLFVTK_	ENSG00000198231|ENST00000389924|DDX42;ENST00000578593.1_1_17:61889231-61895755:+|nuORF;nc|ENSG00000198231|Q86XP3-2|DDX42	78.26377905018397	0.07733306720594871	5				NaN	NaN	0	NaN	9487	5584	15071
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15074	43.526	NaN	474.67	30	0	70.256	0.03	+			18036	IIPKPFPW	8	28	333.20147705078125	NaN	0	333.20147705078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IIPKPFPW_	tr|U7SMP9|U7SMP9_FUSNUHeptaprenyldiphosphatesynthaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01776PE=4SV=1	19.359975847455235	1.7418937515398478	5				NaN	NaN	0	NaN	9488	5584	15071
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15102	43.672	NaN	1227.8	30	0	173.92	0.143			+	11405	FLPQPPPLV	9	33	336.5343036899105	NaN	0	336.534423828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FLPQPPPLV_	REV__ENSG00000186788|ENST00000445385|SPATA31D3;REV__ENSG00000189357|ENST00000419782|SPATA31D4	20.94693142431847	0.3660861156085067	5				NaN	NaN	0	NaN	9489	5611	15101
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15110	43.705	NaN	1179.5	30	0	218.54	0.145			+	43781	TLKGDDTNLY	10	48	570.2830810546875	NaN	0	570.2830810546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TLKGDDTNLY_	REV__tr|U7SRJ7|U7SRJ7_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01629PE=4SV=1	37.50817390946774	0.3770175549877019	5				NaN	NaN	0	NaN	9491	5617	15109
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15114	43.722	NaN	1064.8	30	0	137.36	0.143	+			47204	VMALKGLGKP	10	46	507.3132629394531	NaN	0	507.3132629394531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VMALKGLGKP_	ENST00000526145.6_2_11:128332223-128332259:-|nuORF	42.396135135203025	0.3536752194735987	5				NaN	NaN	0	NaN	9492	5620	15113
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15118	43.739	NaN	10535	30	0	1097.3	0.138				-1	 	0	74	316.1810248400173	630.3474967468346	2	316.1802062988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9493	5623	15117
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15123	43.756	NaN	3299.5	30	0	2564.6	0.214				-1	 	0	37	324.69432829767686	647.3741036621537	2	324.69366455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9495	5626	15122
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15124	43.76	NaN	807.66	30	0	51.996	0.03	+			45074	TVHVDELCP	9	35	338.16242219455864	NaN	0	338.16259765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVHVDELCP_	ENSG00000110713|ENST00000324932|NUP98;nc|ENSG00000110713|P52948-2|NUP98;nc|ENSG00000110713|P52948-6|NUP98;nc|ENSG00000110713|P52948|NUP98;NUP98|p.N1328Tfs*89|2|0.22|ENSG00000110713|chr11:3699159-3699159|T/-|frameshift_variant	20.481830146152948	0.3676602570045296	5				NaN	NaN	0	NaN	9496	5626	15122
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15129	43.775	NaN	475.84	30	0	79.439	0.138				-1	 	0	34	340.6388374462628	NaN	0	340.6388244628906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9498	5629	15128
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15137	43.809	NaN	790.2	30	0	71.845	0.214				-1	LPLLEKSSSR	10	40	391.22504518900485	NaN	0	391.2251281738281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LPLLEKSSSR_	ENST00000457458.6_1_X:47077697-47077844:+|nuORF	16.006774744331256	0.4201028297492154	5				NaN	NaN	0	NaN	9500	5635	15136
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15138	43.813	NaN	631.98	30	0	109.31	0.031			+	-1	YMNSSCPGR	9	33	344.14030849579905	NaN	0	344.139892578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_YM(Oxidation (M))NSSCPGR_	REV__ENSG00000005073|ENST00000006015|HOXA11	20.83715455343099	0.3664576568725329	5				NaN	NaN	0	NaN	9501	5635	15136
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15180	44.025	NaN	730.01	30	0	74.761	0.143	+			6890	CLNRTRQM	8	42	511.25557442379113	1020.4965959143823	2	511.2540588378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CLNRTRQM_	ENST00000527570.1_1_1:112281863-112282013:-|nuORF	45.9519527083369	0.6193794311207887	5				NaN	NaN	0	NaN	9504	5674	15179
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15197	44.108	NaN	1228.5	30	0	258.37	0.143			+	37224	SKNALYKAL	9	29	336.53433182384833	NaN	0	336.5343017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SKNALYKAL_	REV__tr|U7T5C0|U7T5C0_FUSNUKetoacylreductaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00515PE=3SV=1	17.364965105453717	0.37820932774828947	5				NaN	NaN	0	NaN	9506	5689	15196
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15207	44.157	NaN	1634.8	30	0	184.03	0.214			+	-1	LLAMATDGIK	10	58	524.7901927280735	1047.565832522947	2	524.7896728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LLAM(Oxidation (M))ATDGIK_	REV__ENSG00000115129|ENST00000238721|TP53I3;REV__ENST00000417886.1_1_2:24303714-24307337:-|nuORF;REV__nc|ENSG00000115129|Q53FA7-2|TP53I3;REV__TP53I3|p.E195Rfs*5|1|0.44|ENSG00000115129|chr2:24080855-24080856|-/T|frameshift_variant	49.44154591367651	0.46214596422418036	5				NaN	NaN	0	NaN	9507	5698	15206
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15208	44.161	NaN	1055.2	30	0	60.215	0.032	+			30041	PPSLPLGT	8	56	391.22504518900485	NaN	0	391.2249755859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PPSLPLGT_	ENST00000337620.8_1_7:26241072-26246069:+|nuORF	33.51558372728122	1.7418937515398478	5				NaN	NaN	0	NaN	9508	5698	15206
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15212	44.175	NaN	2875.6	30	0	335.46	0.143	+			50356	WVLIFLSI	8	56	495.8041922248979	989.5938315165959	2	496.303955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WVLIFLSI_	ENST00000465969.5_1_1:63879657-63879738:+|nuORF	77.94384346573518	0.3407065481025094	5				NaN	NaN	0	NaN	9509	5701	15211
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15237	44.306	NaN	1244.2	30	0	140.83	0.145			+	44498	TSSLSDNLNTL	11	60	582.79052734375	NaN	0	582.79052734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSSLSDNLNTL_	REV__ENSG00000100578|ENST00000652326|KIAA0586;REV__ENST00000538571.6_1_14:58909433-59003756:+|nuORF;REV__KIAA0586|p.P1497Lfs*6|1|0.11|ENSG00000100578|chr14:58547816-58547816|C/-|frameshift_variant;REV__nc|ENSG00000100578|Q9BVV6-2|KIAA0586;REV__nc|ENSG00000100578|Q9BVV6-3|KIAA0586;REV__nc|ENSG00000100578|Q9BVV6-4|KIAA0586;REV__nc|ENSG00000100578|Q9BVV6|KIAA0586	50.033510581677724	0.3150780456176802	5				NaN	NaN	0	NaN	9510	5725	15236
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15244	44.339	NaN	1013.8	30	0	83.38	0.143	+			10742	FAEGFVRAL	9	48	505.27842271792247	1008.542292502645	2	505.2766418457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FAEGFVRAL_	ENSG00000177606|ENST00000371222|JUN;JUN|p.R257Kfs*53|1|0.31|ENSG00000177606|chr1:58782301-58782302|-/T|frameshift_variant	49.44154591367651	0.3095138337212152	5				NaN	NaN	0	NaN	9511	5731	15243
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15267	44.454	NaN	1380.3	30	0	205.05	0.143				-1	ASTKKVVMK	9	19	336.53481945027977	1006.5826289510394	3	336.53399658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ASTKKVVM(Oxidation (M))K_	CFAP47|p.F1567Vfs*4|1|0.31|ENSG00000165164|chrX:36098829-36098830|-/G|frameshift_variant;CFAP47|p.H2345Afs*15|1|0.09|ENSG00000165164|chrX:36236809-36236810|-/A|frameshift_variant;CFAP47|p.K734Nfs*6|1|0.13|ENSG00000165164|chrX:35971909-35971909|A/-|frameshift_variant;CFAP47|p.P2326Tfs*34|1|0.26|ENSG00000165164|chrX:36236751-36236752|-/A|frameshift_variant;ENSG00000165164|ENST00000378653|CFAP47;nc|ENSG00000165164|Q6ZTR5-1|CFAP47;nc|ENSG00000165164|Q6ZTR5-2|CFAP47;nc|ENSG00000165164|Q6ZTR5-6|CFAP47	19.996771675451527	0.6112419832031292	5				NaN	NaN	0	NaN	9513	5752	15266
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15318	44.711	NaN	1764.2	30	0	274.27	0.144			+	-1	RDYAMTALL	9	56	556.2763590893793	1110.5381652455585	2	556.2761840820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))RDYAM(Oxidation (M))TALL_	REV__ENSG00000166363|ENST00000299454|OR10A5;REV__ENSG00000170782|ENST00000379829|OR10A4;REV__ENSG00000170790|ENST00000641461|OR10A2;REV__ENSG00000182783|ENST00000641069|OR2T29;REV__ENSG00000196098|ENST00000354924|OR5K4;REV__ENSG00000196944|ENST00000366473|OR2T4;REV__ENSG00000197938|ENST00000355273|OR5H2;REV__ENSG00000203661|ENST00000641363|OR2T5;REV__ENSG00000230301|ENST00000615035|OR5H6;REV__ENSG00000231192|ENST00000641874|OR5H1;REV__ENSG00000233412|ENST00000641450|OR5H15;REV__ENSG00000236032|ENST00000641380|OR5H14;REV__nc|ENSG00000196944|Q8NH00|OR2T4;REV__nc|ENSG00000230301|Q8NGV6|OR5H6;REV__nc|ENSG00000232535|P0DN80|OR5H8;REV__OR2T29|p.V128M|1|0.28|ENSG00000203661|chr1:248559110-248559110|C/T|missense_variant;REV__OR5H15|p.C112F|1|0.17|ENSG00000233412|chr3:98169034-98169034|G/T|missense_variant;REV__OR5H6|p.F225Lfs*18|1|0.28|ENSG00000230301|chr3:98264955-98264955|T/-|frameshift_variant;REV__OR5H6|p.L271Sfs*18|1|0.22|ENSG00000230301|chr3:98265091-98265091|C/-|frameshift_variant	35.61828744233558	0.47037581924408073	5				NaN	NaN	0	NaN	9516	5800	15317
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15325	44.744	NaN	732.22	30	0	33.808	0.138				-1	 	0	38	338.19436615049943	674.3741793677989	2	338.1932678222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9517	5806	15324
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15329	44.761	NaN	611.62	30	0	42.985	0.214			+	18130	ILGPAPAA	8	35	355.2146304354271	NaN	0	355.21484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ILGPAPAA_	REV__ENSG00000130313|ENST00000252603|PGLS;REV__ENST00000596799.1_1_19:17622481-17623081:+|nuORF	16.704963439144045	1.7418937515398478	5				NaN	NaN	0	NaN	9518	5809	15328
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15330	44.764	NaN	581.68	30	0	33.964	0.032	+			44024	TPLPGSPL	8	41	391.22552490234375	NaN	0	391.22552490234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TPLPGSPL_	ENST00000378598.4_1_1:1849323-1850689:-|nuORF	37.028477286268924	1.7418937515398478	5				NaN	NaN	0	NaN	9519	5809	15328
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15349	44.859	NaN	504.89	30	0	42.56	0.14			+	34967	SAALGVRR	8	29	415.25396294883615	NaN	0	415.254150390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAALGVRR_	REV__ADAMDEC1|p.K341Rfs*7|1|0.55|ENSG00000134028|chr8:24400173-24400173|A/-|frameshift_variant;REV__ENSG00000134028|ENST00000256412|ADAMDEC1;REV__nc|ENSG00000134028|O15204-2|ADAMDEC1	18.324413293986947	1.7418937515398478	5				NaN	NaN	0	NaN	9520	5827	15348
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15353	44.876	NaN	1682.8	30	0	244.62	0.139	+			15564	GVGAVLGF	8	41	360.2076474450437	718.4007419568874	2	360.2067565917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVGAVLGF_	tr|U7SJW1|U7SJW1_FUSNUFerrousirontransportproteinBOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02106PE=3SV=1	24.504012794735996	0.7701314986472447	5				NaN	NaN	0	NaN	9521	5830	15352
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15363	44.926	NaN	581.31	30	0	59.905	0.142	+			82	AACNIYSTL	9	31	478.23150698244547	NaN	0	478.2318420410156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AACNIYSTL_	ENSG00000158467|ENST00000325006|AHCYL2;nc|ENSG00000158467|Q96HN2-2|AHCYL2;nc|ENSG00000158467|Q96HN2-3|AHCYL2;nc|ENSG00000158467|Q96HN2-4|AHCYL2;TNPO3-AHCYL2|1|fusion	37.15910966729921	0.2899585034171616	5				NaN	NaN	0	NaN	9522	5839	15362
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15383	45.023	NaN	2663	30	0	359.35	0.143				-1	 	0	49	504.31185227164224	1006.6091516100845	2	504.8139953613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9524	5857	15382
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15388	45.04	NaN	4300.2	30	0	602.66	0.143			+	20653	KGKMRIFK	8	61	504.31185227164224	1006.6091516100845	2	504.3111267089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KGKMRIFK_	REV__ENST00000229812.7_1_6:36463177-36463339:-|nuORF	35.200714571348534	0.6875396545722289	5				NaN	NaN	0	NaN	9526	5860	15387
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15398	45.089	NaN	1439.5	30	0	162.99	0.138				-1	 	0	47	338.1943482257886	674.3741435183772	2	338.1935119628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9527	5869	15397
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15430	45.252	NaN	1732.4	30	0	1299.9	0.139				-1	 	0	30	346.707431840107	691.400310747014	2	346.7068786621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9529	5899	15429
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15437	45.285	NaN	1206.5	30	0	119.98	0.144			+	51004	YIVVAKMKM	9	56	557.8024024588623	1113.5902519845245	2	557.8013305664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_YIVVAKM(Oxidation (M))KM(Oxidation (M))_	REV__tr|U7T3X0|U7T3X0_FUSNUEnoylreductase(ER)domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00645PE=4SV=1	40.5726180659479	0.4135428067754104	5				NaN	NaN	0	NaN	9530	5905	15436
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15452	45.351	NaN	1016.8	30	0	100.59	0.139	+			1568	AGGPGKPGG	9	36	349.1846308294326	NaN	0	349.1844482421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AGGPGKPGG_	ENSG00000150995|ENST00000649015|ITPR1;ENST00000487016.1_1_3:4774792-4777134:+|nuORF;nc|ENSG00000150995|Q14643-2|ITPR1;nc|ENSG00000150995|Q14643-3|ITPR1;nc|ENSG00000150995|Q14643-4|ITPR1;nc|ENSG00000150995|Q14643-5|ITPR1;nc|ENSG00000150995|Q14643-6|ITPR1;nc|ENSG00000150995|Q14643-7|ITPR1;nc|ENSG00000150995|Q14643-8|ITPR1	26.79610172149135	0.34227917631780574	5				NaN	NaN	0	NaN	9533	5917	15451
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15457	45.369	NaN	484.29	30	0	29.736	0.139	+			50557	YATVHQSYT	9	31	357.16980627092147	NaN	0	357.17071533203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YATVHQSYT_	ATXN2L|p.P862T|1|0.5|ENSG00000168488|chr16:28835298-28835298|C/A|missense_variant	23.04248740728303	0.3589936788096251	5				NaN	NaN	0	NaN	9535	5920	15456
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15470	45.437	NaN	12769	30	0	1307.1	0.138				-1	 	0	79	338.1941749323593	674.3737969315187	2	338.1934509277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9536	5932	15469
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15480	45.487	NaN	3660	30	0	2604.8	0.138				-1	 	0	33	327.20204362400074	326.19476715740075	1	327.20111083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9537	5941	15479
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15484	45.504	NaN	17813	30	0	3148.7	0.138				-1	 	0	61	318.196668134063	634.378783334926	2	318.19610595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9538	5944	15483
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15489	45.522	NaN	636.14	30	0	51.17	0.214	+			23225	KYGPVFSF	8	37	472.7466735839844	NaN	0	472.7466735839844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KYGPVFSF_	CYP51A1|p.L333Wfs*13|1|0.15|ENSG00000001630|chr7:92123208-92123208|A/-|frameshift_variant;ENSG00000001630|ENST00000003100|CYP51A1	27.882242232435846	1.7418937515398478	5				NaN	NaN	0	NaN	9540	5947	15488
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15490	45.526	NaN	654.2	30	0	65.884	0.034				-1	GLCAVCLL	8	29	453.2328796386719	NaN	0	453.2328796386719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_GLC(Carbamidomethyl (C))AVC(Carbamidomethyl (C))LL_	ENSG00000086696|ENST00000199936|HSD17B2;HSD17B2|p.A42T|1|0.38|ENSG00000086696|chr16:82035548-82035548|G/A|missense_variant	33.49298260027079	1.7418937515398478	5				NaN	NaN	0	NaN	9541	5947	15488
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15499	45.559	NaN	662.87	30	0	164.13	0.142	+			39776	STKKSQPPP	9	28	485.2719123651715	NaN	0	485.2720031738281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STKKSQPPP_	ENSG00000163359|ENST00000295550|COL6A3;ENST00000491769.1_1_2:238233419-238250825:-|nuORF;ENST00000493608.1_1_2:238242084-238243404:-|nuORF;nc|ENSG00000163359|P12111-2|COL6A3;nc|ENSG00000163359|P12111-4|COL6A3	15.641811463095205	0.38404136392510424	5				NaN	NaN	0	NaN	9544	5953	15498
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15527	45.694	NaN	1262.9	30	0	160.84	0.144			+	-1	LLGPCLRGPM	10	53	536.7843455247313	1071.5541381162625	2	536.7841186523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LLGPCLRGPM(Oxidation (M))_	REV__ENST00000476429.5_1_2:219143213-219144098:-|nuORF	29.14955571784316	0.6417842315402807	5				NaN	NaN	0	NaN	9548	5977	15526
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15544	45.779	NaN	684.97	30	0	59.952	0.138				-1	 	0	36	338.1941749323593	674.3737969315187	2	338.1938781738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9550	5992	15543
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15551	45.813	NaN	1519.4	30	0	431.26	0.144			+	27914	MTVLWDPTK	9	50	545.7834602784385	1089.552367623677	2	545.7825317382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MTVLWDPTK_	REV__ENSG00000164334|ENST00000695508|FAM170A;REV__nc|ENSG00000164334|A1A519-2|FAM170A;REV__nc|ENSG00000164334|A1A519-3|FAM170A;REV__nc|ENSG00000164334|A1A519-4|FAM170A	37.15910966729921	0.4535818937225704	5				NaN	NaN	0	NaN	9551	5998	15550
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15603	46.072	NaN	522.92	30	0	41.594	0.139	+			13717	GPVLPLSA	8	40	377.2285296337768	752.4425063343537	2	377.22802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GPVLPLSA_	CFAP43|p.D1520Ifs*15|1|0.35|ENSG00000197748|chr10:104133658-104133658|C/-|frameshift_variant;CFAP43|p.S792Afs*19|1|0.25|ENSG00000197748|chr10:104179848-104179848|T/-|frameshift_variant;CFAP43|p.V1381Wfs*7|1|0.2|ENSG00000197748|chr10:104143444-104143444|T/-|frameshift_variant;ENSG00000197748|ENST00000357060|CFAP43;nc|ENSG00000197748|Q8NDM7-2|CFAP43;nc|ENSG00000197748|Q8NDM7-3|CFAP43;nc|ENSG00000197748|Q8NDM7-4|CFAP43;nc|ENSG00000197748|Q8NDM7-5|CFAP43	23.036711822280957	0.7814608874307191	5				NaN	NaN	0	NaN	9555	6046	15602
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15611	46.104	NaN	1422.9	30	0	244.24	0.143	+			44035	TPPAPSPQTL	10	34	504.77356211602455	1007.5325712988491	2	504.77264404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TPPAPSPQTL_	ENST00000327367.8_1_15:67483135-67483486:+|nuORF	40.05817265558897	0.5486090488315611	5				NaN	NaN	0	NaN	9557	6052	15610
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15621	46.153	NaN	890.83	30	0	180.88	0.144				-1	ASTKKVVMK	9	28	336.53425836946496	NaN	0	336.5342712402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ASTKKVVM(Oxidation (M))K_	CFAP47|p.F1567Vfs*4|1|0.31|ENSG00000165164|chrX:36098829-36098830|-/G|frameshift_variant;CFAP47|p.H2345Afs*15|1|0.09|ENSG00000165164|chrX:36236809-36236810|-/A|frameshift_variant;CFAP47|p.K734Nfs*6|1|0.13|ENSG00000165164|chrX:35971909-35971909|A/-|frameshift_variant;CFAP47|p.P2326Tfs*34|1|0.26|ENSG00000165164|chrX:36236751-36236752|-/A|frameshift_variant;ENSG00000165164|ENST00000378653|CFAP47;nc|ENSG00000165164|Q6ZTR5-1|CFAP47;nc|ENSG00000165164|Q6ZTR5-2|CFAP47;nc|ENSG00000165164|Q6ZTR5-6|CFAP47	19.996771675451527	0.3693019437812985	5				NaN	NaN	0	NaN	9558	6061	15620
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15641	46.249	NaN	758.42	30	0	68.794	0.139	+			13582	GLVFAVGG	8	47	360.2074562690952	718.4003596049904	2	360.20703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GLVFAVGG_	ENSG00000109466|ENST00000226725|KLHL2;nc|ENSG00000109466|O95198-2|KLHL2;nc|ENSG00000109466|O95198-3|KLHL2	24.504012794735996	0.7701314986472447	5				NaN	NaN	0	NaN	9560	6079	15640
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15645	46.266	NaN	944.87	30	0	132.97	0.214			+	42329	TAGGIVFV	8	37	382.2209020369385	762.4272511406771	2	382.2200012207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAGGIVFV_	REV__ENSG00000136631|ENST00000644510|VPS45;REV__ENST00000491789.1_1_1:150071171-150116971:+|nuORF;REV__nc|ENSG00000136631|Q9NRW7-2|VPS45	21.70233525837049	0.7917639344264583	5				NaN	NaN	0	NaN	9561	6082	15644
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15646	46.269	NaN	626.8	30	0	126.78	0.035			+	27286	MGLARGLAAK	10	36	494.29127248621796	986.567992039236	2	494.7763977050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MGLARGLAAK_	REV__HUWE1|p.A2165G|1|0.21|ENSG00000086758|chrX:53569646-53569646|G/C|missense_variant	15.641811463095205	0.7369665665077569	5				NaN	NaN	0	NaN	9562	6082	15644
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15661	46.334	NaN	850.86	30	0	70.361	0.143	+			25698	LRKSGKMAP	9	37	494.29127248621796	986.567992039236	2	494.2897644042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LRKSGKMAP_	ENST00000264501.8_2_4:123274283-123275004:+|nuORF	21.9598887501803	0.5980208138527809	5				NaN	NaN	0	NaN	9565	6094	15660
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15698	46.524	NaN	781.06	30	0	72.446	0.141	+			50185	WLLPRAGG	8	45	435.2512945063248	NaN	0	435.2507629394531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WLLPRAGG_	nc|ENSG00000272681|A6NKX1|FAM223B;nc|ENSG00000279245|Q8IWN6|FAM223A	29.841539824830324	1.7418937515398478	5				NaN	NaN	0	NaN	9566	6130	15697
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15711	46.59	NaN	2561.9	30	0	168.36	0.214				-1	 	0	51	360.20739389125004	718.4002348493001	2	360.2068786621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9567	6142	15710
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15712	46.593	NaN	828.3	30	0	41.176	0.044				-1	RCFRRVCRFRH	11	61	825.4262084960938	NaN	0	825.4262084960938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_RC(Carbamidomethyl (C))FRRVC(Carbamidomethyl (C))RFRH_	ENSG00000215817|ENST00000651890|ZC3H11B;nc|ENSG00000214558|P0DQW0|ZC3H11C	2.92943323627438	0.456735970842152	5				NaN	NaN	0	NaN	9568	6142	15710
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15719	46.625	NaN	1080.5	30	0	261.34	0.143	+			43789	TLKTLREF	8	25	336.5343982243809	NaN	0	336.5344543457031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TLKTLREF_	ENST00000254691.9_2_5:40853406-40853502:+|nuORF	18.324413293986947	1.7418937515398478	5				NaN	NaN	0	NaN	9569	6148	15718
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15729	46.673	NaN	2731.1	30	0	2062.5	0.139				-1	 	0	31	368.7206909711194	735.4268290090388	2	368.7200012207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9570	6157	15728
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15739	46.722	NaN	818.3	30	0	81.144	0.138				-1	 	0	44	338.19419851807567	674.3738441029514	2	338.1934509277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9571	6166	15738
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15745	46.741	NaN	1343.3	30	0	284.29	0.142				-1	LTKIQVKM	8	43	488.79619719395896	975.5778414547179	2	488.7949523925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LTKIQVKM(Oxidation (M))_	ENSG00000100865|ENST00000216756|CINP;nc|ENSG00000100865|Q9BW66-3|CINP	32.81241826257853	0.7059802730411993	5				NaN	NaN	0	NaN	9574	6169	15744
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15770	46.872	NaN	793.9	30	0	67.966	0.138				-1	 	0	28	340.2099011146524	678.4052492961048	2	340.2090759277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9575	6193	15769
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15777	46.906	NaN	2584.9	30	0	2124.8	0.139				-1	 	0	32	348.7231327438973	695.4317125545946	2	348.7225341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9576	6199	15776
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15784	46.939	NaN	1597.2	30	0	241.68	0.139				-1	 	0	44	360.20739389125004	718.4002348493001	2	360.2064208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9577	6205	15783
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15819	47.117	NaN	1647.4	30	0	155.86	0.138				-1	 	0	43	338.19428299939597	674.374013065592	2	338.19342041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9579	6238	15818
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15829	47.165	NaN	975.83	30	0	76.201	0.142	+			2750	ARFQLFLRRY	10	45	457.2642759676793	NaN	0	457.2642517089844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ARFQLFLRRY_	ENSG00000172782|ENST00000612771|FADS6;nc|ENSG00000172782|Q8N9I5-2|FADS6;nc|ENSG00000172782|Q8N9I5|FADS6	27.047317107675042	0.41136583337917604	5				NaN	NaN	0	NaN	9580	6247	15828
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15839	47.214	NaN	669.41	30	0	68.283	0.138				-1	 	0	34	340.2099011146524	678.4052492961048	2	340.2091369628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9581	6256	15838
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15898	47.519	NaN	671.01	30	0	45.663	0.142			+	50881	YFLKVRSESKL	11	38	457.26464932299797	NaN	0	457.2649841308594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YFLKVRSESKL_	REV__DOCK9|p.N1450Mfs*6|1|0.28|ENSG00000088387|chr13:98831683-98831683|T/-|frameshift_variant;REV__DOCK9|p.T1335Yfs*4|2|0.43|ENSG00000088387|chr13:98850057-98850058|-/A|frameshift_variant;REV__ENSG00000088387|ENST00000682017|DOCK9;REV__nc|ENSG00000088387|Q9BZ29-3|DOCK9;REV__nc|ENSG00000088387|Q9BZ29-4|DOCK9;REV__nc|ENSG00000088387|Q9BZ29-5|DOCK9;REV__nc|ENSG00000088387|Q9BZ29-6|DOCK9;REV__nc|ENSG00000088387|Q9BZ29|DOCK9	23.37791116691581	0.456735970842152	5				NaN	NaN	0	NaN	9583	6313	15897
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15908	47.567	NaN	1508.2	30	0	256.04	0.214	+			36950	SILPAIFQK	9	50	508.8109436035156	NaN	0	508.8109436035156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SILPAIFQK_	ENSG00000166471|ENST00000528080|TMEM41B;ENST00000524543.5_1_11:9304973-9316821:-|nuORF;ENST00000533867.1_1_11:9304973-9309374:-|nuORF	29.14955571784316	0.3303970763161698	5				NaN	NaN	0	NaN	9584	6322	15907
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15909	47.57	NaN	992.8	30	0	251.18	0.035			+	14417	GTAPLVILSH	10	24	336.5344146431692	NaN	0	336.5343322753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTAPLVILSH_	REV__ENST00000444374.1_1_9:92316696-92316852:+|nuORF	15.641811463095205	0.4201028297492154	5				NaN	NaN	0	NaN	9585	6322	15907
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15985	47.952	NaN	797.23	30	0	50.582	0.142			+	7895	DRVLRPAS	8	43	457.2644040340139	NaN	0	457.2644958496094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DRVLRPAS_	REV__ENST00000427606.2_1_8:146220430-146220631:-|nuORF	27.882242232435846	1.7418937515398478	5				NaN	NaN	0	NaN	9589	6394	15984
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15992	47.985	NaN	1814.1	30	0	1182.9	0.14	+			30379	PVPGIQAV	8	34	390.73401810734134	779.4534832814827	2	390.7332763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PVPGIQAV_	ENST00000526885.5_1_19:1041282-1042570:+|nuORF	15.63621529709179	0.7929342111279789	5				NaN	NaN	0	NaN	9590	6400	15991
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	15999	48.017	NaN	705.52	30	0	77.234	0.142	+			7792	DPHLLHLL	8	44	479.27793391693695	NaN	0	479.27880859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DPHLLHLL_	ENST00000342992.10_3_2:179510673-179515519:-|nuORF	21.70233525837049	1.7418937515398478	5				NaN	NaN	0	NaN	9591	6406	15998
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16003	48.034	NaN	877.2	30	0	101.2	0.214			+	-1	RAGRICRL	8	41	501.29060417379776	NaN	0	501.2899169921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_RAGRIC(Carbamidomethyl (C))RL_	REV__ENST00000355943.7_1_5:110074761-110074947:+|nuORF	24.20275056022122	1.7418937515398478	5				NaN	NaN	0	NaN	9592	6409	16002
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16004	48.038	NaN	512.13	30	0	28.404	0.032	+			30588	QAPSAAAAT	9	36	394.19893402643754	NaN	0	394.1988525390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QAPSAAAAT_	ENSG00000163132|ENST00000382723|MSX1;MSX1|p.A50Gfs*125|1|1.0|ENSG00000163132|chr4:4860042-4860043|-/G|frameshift_variant	23.04248740728303	0.3589936788096251	5				NaN	NaN	0	NaN	9593	6409	16002
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16039	48.215	NaN	1065.1	30	0	646.3	0.139	+			18039	IIPVGKGG	8	31	370.7364553538724	739.4583577745448	2	370.73590087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IIPVGKGG_	ENSG00000092295|ENST00000206765|TGM1;TGM1|p.S190T|1|0.51|ENSG00000092295|chr14:24260638-24260638|C/G|missense_variant	14.664097394203935	0.7913966407026132	5				NaN	NaN	0	NaN	9595	6442	16038
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16043	48.232	NaN	1001.4	30	0	172.95	0.143			+	25221	LMTKKTSKA	9	24	336.53442018980815	NaN	0	336.5343017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LMTKKTSKA_	REV__ENSG00000099219|ENST00000339450|ERMP1	12.811709888998246	0.3936198799427492	5				NaN	NaN	0	NaN	9596	6445	16042
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16047	48.248	NaN	1336.2	30	0	210.18	0.214			+	30407	PVVAGPAL	8	41	362.2230414183375	722.431529903475	2	362.2221984863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PVVAGPAL_	REV__ENSG00000137221|ENST00000372449|TJAP1;REV__ENST00000454762.1_1_6:43472456-43473590:+|nuORF;REV__nc|ENSG00000137221|Q5JTD0-2|TJAP1;REV__nc|ENSG00000137221|Q5JTD0-4|TJAP1	16.704963439144045	0.7946246187734944	5				NaN	NaN	0	NaN	9597	6448	16046
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16048	48.252	NaN	1160.2	30	0	427.38	0.031				-1	 	0	27	356.2552043016317	710.4958556700634	2	356.254638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9598	6448	16046
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16082	48.427	NaN	1020.2	30	0	48.802	0.214			+	47104	VLLMPARSA	9	60	479.2776695222838	NaN	0	479.27642822265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VLLMPARSA_	REV__ENSG00000162040|ENST00000454677|HS3ST6	26.69291269510374	0.34280015626154364	5				NaN	NaN	0	NaN	9599	6481	16081
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16083	48.43	NaN	820.28	30	0	42.768	0.033			+	47588	VRPSRLGG	8	46	421.2536325510105	NaN	0	421.2530212402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VRPSRLGG_	REV__ENSG00000160404|ENST00000373284|TOR2A;REV__ENST00000472723.1_1_9:130496559-130497006:-|nuORF;REV__nc|ENSG00000160404|Q5JU69-2|TOR2A;REV__nc|ENSG00000160404|Q8N2E6|TOR2A	18.324413293986947	1.7418937515398478	5				NaN	NaN	0	NaN	9600	6481	16081
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16090	48.461	NaN	684.89	30	0	94.696	0.139			+	-1	VLCYALLAR	9	31	360.2064961446512	NaN	0	360.20648193359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_VLC(Carbamidomethyl (C))YALLAR_	REV__CHD9|p.M2707Tfs*40|1|0.1|ENSG00000177200|chr16:53324320-53324321|-/C|frameshift_variant;REV__CHD9|p.N1798Tfs*17|1|0.12|ENSG00000177200|chr16:53292931-53292931|A/-|frameshift_variant;REV__CHD9|p.R2541Kfs*9|1|0.11|ENSG00000177200|chr16:53318242-53318243|-/A|frameshift_variant;REV__CHD9|p.R2632Dfs*28|1|0.35|ENSG00000177200|chr16:53324090-53324090|G/-|frameshift_variant;REV__ENSG00000177200|ENST00000447540|CHD9;REV__nc|ENSG00000177200|Q3L8U1-2|CHD9;REV__nc|ENSG00000177200|Q3L8U1-3|CHD9	24.519189625965996	0.35377483217337163	5				NaN	NaN	0	NaN	9601	6487	16089
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16125	48.639	NaN	1750	30	0	372.27	0.145				-1	MPLRDETLREV	11	57	687.8543280728452	1373.6941032124903	2	687.8524169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))PLRDETLREV_	ENSG00000112041|ENST00000229771|TULP1;nc|ENSG00000112041|O00294-2|TULP1;TULP1|p.Q301Rfs*9|1|0.43|ENSG00000112041|chr6:35506101-35506101|G/-|frameshift_variant	27.047317107675042	0.7060868989289394	5				NaN	NaN	0	NaN	9603	6520	16124
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16130	48.656	NaN	854.04	30	0	79.282	0.145			+	26666	LVFESETIKF	10	45	606.8265991210938	NaN	0	606.8265991210938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LVFESETIKF_	REV__ENST00000484538.1_1_2:63826339-63826555:+|nuORF	25.57405402267927	0.4162033004763879	5				NaN	NaN	0	NaN	9605	6523	16129
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16140	48.706	NaN	621.21	30	0	96.001	0.144				-1	MKKKVRMN	8	31	525.8006591796875	NaN	0	525.8006591796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_MKKKVRM(Oxidation (M))N_	ENSG00000183638|ENST00000382483|RP1L1;RP1L1|p.G2243Rfs*6|1|0.25|ENSG00000183638|chr8:10607371-10607372|-/T|frameshift_variant;RP1L1|p.V381Cfs*109|1|0.28|ENSG00000183638|chr8:10612957-10612957|C/-|frameshift_variant	19.359975847455235	1.7418937515398478	5				NaN	NaN	0	NaN	9606	6532	16139
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16153	48.77	NaN	893.11	30	0	57.234	0.142			+	25164	LLVKAYNH	8	55	479.2788095705666	956.5430662079332	2	479.27667236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LLVKAYNH_	REV__ALS2|p.P1016Lfs*29|1|0.35|ENSG00000003393|chr2:201726799-201726799|G/-|frameshift_variant;REV__ENSG00000003393|ENST00000264276|ALS2;REV__ENST00000482891.5_1_2:202587756-202633608:-|nuORF;REV__ENST00000494017.5_1_2:202591977-202598136:-|nuORF	33.51558372728122	0.7005509609380386	5				NaN	NaN	0	NaN	9607	6544	16152
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16172	48.866	NaN	982.2	30	0	70.25	0.144	+			20894	KIQQLMKAS	9	52	523.8060302734375	NaN	0	523.8060302734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KIQQLMKAS_	nc|ENSG00000139436|Q14161-11|GIT2	26.063383197487333	0.34597851983111116	5				NaN	NaN	0	NaN	9608	6562	16171
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16206	49.042	NaN	1196.7	30	0	100.99	0.143				-1	 	0	53	501.29146008567795	1000.5683672381559	2	501.2905578613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9609	6595	16205
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16226	49.139	NaN	783.54	30	0	103.07	0.142	+			33325	RGSKAPALAS	10	41	479.27839032947736	956.5422277257547	2	479.27667236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RGSKAPALAS_	ENSG00000169994|ENST00000409816|MYO7B;ENST00000491278.5_1_2:128392149-128394989:+|nuORF;ENST00000494959.1_1_2:128392149-128394989:+|nuORF;ENST00000496841.5_1_2:128393248-128394989:+|nuORF;nc|ENSG00000169994|Q6PIF6|MYO7B	24.519189625965996	0.6795976720565101	5				NaN	NaN	0	NaN	9611	6613	16225
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16242	49.219	NaN	2215.8	30	0	1270.8	0.215				-1	 	0	43	412.7467824513533	823.4790119695066	2	412.74609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9612	6628	16241
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16243	49.223	NaN	996.24	30	0	59.776	0.035			+	45399	TVTVLRDKN	9	47	523.3040213206949	NaN	0	523.3038330078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVTVLRDKN_	REV__ENSG00000198965|ENST00000641067|OR10R2;REV__nc|ENSG00000198965|Q8NGX6|OR10R2	20.94693142431847	0.3660861156085067	5				NaN	NaN	0	NaN	9613	6628	16241
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16247	49.238	NaN	3551.6	30	0	2710.8	0.214			+	-1	MDGPCPKE	8	39	467.1938990373566	932.3732451415132	2	467.1929016113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_MDGPC(Carbamidomethyl (C))PKE_	REV__ENSG00000165323|ENST00000525166|FAT3;REV__FAT3|p.P4078Rfs*36|1|0.42|ENSG00000165323|chr11:92883135-92883135|C/-|frameshift_variant;REV__FAT3|p.V4082Rfs*13|1|0.23|ENSG00000165323|chr11:92883145-92883146|-/C|frameshift_variant;REV__FAT3|p.V4210Cfs*6|1|0.05|ENSG00000165323|chr11:92889212-92889213|-/T|frameshift_variant;REV__nc|ENSG00000165323|Q8TDW7|FAT3	18.324413293986947	0.7971860551947066	5				NaN	NaN	0	NaN	9614	6631	16246
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16248	49.241	NaN	876.02	30	0	53.485	0.106	+			29990	PPGARRGP	8	45	404.23241353899175	NaN	0	404.2326354980469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PPGARRGP_	ENST00000223145.9_1_7:8008821-8009403:+|nuORF	28.2542754592877	1.7418937515398478	5				NaN	NaN	0	NaN	9615	6631	16246
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16249	49.243	NaN	681.46	30	0	213.63	0.034				-1	QNIPDSPM	8	35	459.20509846168426	916.3956439901685	2	459.2032470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_QNIPDSPM(Oxidation (M))_	ENSG00000119669|ENST00000238647|IRF2BPL;IRF2BPL|p.L713Sfs*54|1|0.54|ENSG00000119669|chr14:77025656-77025656|G/-|frameshift_variant	19.359975847455235	0.7988239741663654	5				NaN	NaN	0	NaN	9616	6631	16246
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16256	49.274	NaN	976.2	30	0	185.92	0.143				-1	ASTKKVVMK	9	28	336.53422957585286	NaN	0	336.5343017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ASTKKVVM(Oxidation (M))K_	CFAP47|p.F1567Vfs*4|1|0.31|ENSG00000165164|chrX:36098829-36098830|-/G|frameshift_variant;CFAP47|p.H2345Afs*15|1|0.09|ENSG00000165164|chrX:36236809-36236810|-/A|frameshift_variant;CFAP47|p.K734Nfs*6|1|0.13|ENSG00000165164|chrX:35971909-35971909|A/-|frameshift_variant;CFAP47|p.P2326Tfs*34|1|0.26|ENSG00000165164|chrX:36236751-36236752|-/A|frameshift_variant;ENSG00000165164|ENST00000378653|CFAP47;nc|ENSG00000165164|Q6ZTR5-1|CFAP47;nc|ENSG00000165164|Q6ZTR5-2|CFAP47;nc|ENSG00000165164|Q6ZTR5-6|CFAP47	19.996771675451527	0.3693019437812985	5				NaN	NaN	0	NaN	9617	6637	16255
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16271	49.339	NaN	1563.4	30	0	457.43	0.143	+			17457	ICFTCSCCC	9	38	491.6517271476908	NaN	0	491.6518859863281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ICFTCSCCC_	ENSG00000164054|ENST00000296444|SHISA5;ENST00000460758.1_1_3:48511100-48514492:-|nuORF;ENST00000465449.5_1_3:48510508-48514931:-|nuORF;ENST00000466424.5_1_3:48509548-48511229:-|nuORF;ENST00000494854.5_1_3:48510739-48514492:-|nuORF;nc|ENSG00000164054|Q8N114-2|SHISA5;nc|ENSG00000164054|Q8N114-3|SHISA5;nc|ENSG00000164054|Q8N114-4|SHISA5;nc|ENSG00000164054|Q8N114-5|SHISA5	17.364965105453717	0.37820932774828947	5				NaN	NaN	0	NaN	9620	6649	16270
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16278	49.372	NaN	193.7	30	0	35.453	0.214			+	-1	AGNLMMEF	8	13	310.1334163622264	NaN	0	310.1332702636719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_AGNLM(Oxidation (M))MEF_	REV__ENSG00000119285|ENST00000366582|HEATR1	10.865556482863946	1.7418937515398478	5				NaN	NaN	0	NaN	9621	6655	16277
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16279	49.375	NaN	575.94	30	0	26.671	0.036			+	-1	SDMCDTDGDC	10	36	539.1451260606354	NaN	0	539.144775390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_SDM(Oxidation (M))CDTDGDC_	REV__ENSG00000123384|ENST00000243077|LRP1;REV__LRP1|p.D1283Ifs*50|1|0.09|ENSG00000123384|chr12:57175962-57175962|G/-|frameshift_variant;REV__LRP1|p.D1366Rfs*54|1|0.17|ENSG00000123384|chr12:57177143-57177144|-/CA|frameshift_variant;REV__LRP1|p.R3469Gfs*24|2|0.38|ENSG00000123384|chr12:57201552-57201552|C/-|frameshift_variant	6.735540347417125	0.42010282974921537	5				NaN	NaN	0	NaN	9622	6655	16277
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16283	49.39	NaN	987.16	30	0	61.327	0.143				-1	 	0	57	501.29146008567795	1000.5683672381559	2	501.29052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9623	6658	16282
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16288	49.408	NaN	2876	30	0	1625.8	0.142				-1	GFCSGHPR	8	35	459.20509846168426	916.3956439901685	2	459.7056884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GFC(Carbamidomethyl (C))SGHPR_	ENST00000357785.9_2_2:206630286-206656980:+|nuORF	14.664097394203935	0.7913966407026132	5				NaN	NaN	0	NaN	9625	6661	16287
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16295	49.441	NaN	1946.9	30	0	1152.2	0.14				-1	 	0	45	392.74934438849704	783.4841358437941	2	392.74847412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9626	6667	16294
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16299	49.457	NaN	910	30	0	678.17	0.214			+	-1	PSMASDEAE	9	19	318.12290280318877	NaN	0	318.1228332519531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_PSM(Oxidation (M))ASDEAE_	REV__ENSG00000142611|ENST00000270722|PRDM16;REV__ENST00000607632.1_1_1:2985775-3103053:+|nuORF;REV__nc|ENSG00000142611|Q9HAZ2-2|PRDM16;REV__nc|ENSG00000142611|Q9HAZ2-3|PRDM16;REV__PRDM16|p.G513Afs*27|1|0.24|ENSG00000142611|chr1:3411729-3411729|C/-|frameshift_variant;REV__PRDM16|p.N553Efs*51|1|0.46|ENSG00000142611|chr1:3411849-3411850|-/G|frameshift_variant	14.137123925751023	0.3891339986947948	5				NaN	NaN	0	NaN	9627	6670	16298
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16300	49.461	NaN	493.79	30	0	135.3	0.106			+	-1	ECGMCVDD	8	27	329.1075439453125	NaN	0	329.1075439453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_EC(Carbamidomethyl (C))GMC(Carbamidomethyl (C))VDD_	REV__ENST00000490764.5_1_2:234327938-234366271:+|nuORF	7.193352174278301	1.7418937515398478	5				NaN	NaN	0	NaN	9628	6670	16298
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16301	49.463	NaN	1694.9	30	0	110.16	0.039				-1	QQCQGCECMC	10	59	660.1985140396719	NaN	0	660.1997680664062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	3 Carbamidomethyl (C),Oxidation (M)	_QQC(Carbamidomethyl (C))QGC(Carbamidomethyl (C))EC(Carbamidomethyl (C))M(Oxidation (M))C_	ENST00000486611.2_1_14:37046969-37047077:-|nuORF	16.473147378115264	0.4201028297492154	5				NaN	NaN	0	NaN	9629	6670	16298
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16314	49.526	NaN	631.04	30	0	96.67	0.214				-1	SGDCCCCSQ	9	29	510.135537382092	NaN	0	510.1366882324219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_SGDC(Carbamidomethyl (C))C(Carbamidomethyl (C))CCSQ_	ENST00000404569.5_3_22:39905450-39907313:+|nuORF	3.4100154012096215	0.4072763090772754	5				NaN	NaN	0	NaN	9630	6682	16313
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16315	49.529	NaN	1108.4	30	0	92.651	0.033	+			49985	WALRGGLL	8	49	443.26652276573765	NaN	0	443.26605224609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WALRGGLL_	ENSG00000261667|ENST00000562505|LY6L	21.70233525837049	1.7418937515398478	5				NaN	NaN	0	NaN	9631	6682	16313
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16322	49.56	NaN	1258.7	30	0	160.79	0.143			+	-1	GKIAMIIGLN	10	55	523.3051147460938	NaN	0	523.3051147460938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_GKIAM(Oxidation (M))IIGLN_	REV__tr|U7SJJ5|U7SJJ5_FUSNUAminobenzoyl-glutamatetransporterOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02072PE=4SV=1	27.882242232435846	0.4086243523356342	5				NaN	NaN	0	NaN	9632	6688	16321
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16327	49.577	NaN	4175	30	0	3344.5	0.214				-1	DPCPGAGAVM	10	30	467.19381146348303	932.3730699937661	2	467.1928405761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_DPCPGAGAVM(Oxidation (M))_	ENSG00000242220|ENST00000300258|TCP10L	17.364965105453717	0.7282106878714807	5				NaN	NaN	0	NaN	9634	6691	16326
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16328	49.581	NaN	4701.9	30	0	2869.7	0.106	+			2425	APEMPASQS	9	46	459.20511271747	916.39567250174	2	459.20440673828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_APEMPASQS_	ENSG00000095951|ENST00000379388|HIVEP1;nc|ENSG00000095951|P15822-2|HIVEP1;nc|ENSG00000095951|P15822-3|HIVEP1	21.9598887501803	0.5980208138527809	5				NaN	NaN	0	NaN	9635	6691	16326
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16329	49.583	NaN	4748.3	30	0	2861.7	0.106			+	29361	PACWCGHV	8	46	436.68056258910633	871.3465722450127	2	436.67938232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PACWCGHV_	REV__ENST00000596902.1_1_19:44005755-44005845:-|nuORF	16.704963439144045	0.7946246187734944	5				NaN	NaN	0	NaN	9636	6691	16326
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16330	49.584	NaN	1219	30	0	110.78	0.106				-1	NHERCFSCA	9	47	590.7356809688546	NaN	0	590.7350463867188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_NHERC(Carbamidomethyl (C))FSC(Carbamidomethyl (C))A_	ENST00000548783.1_1_12:77256588-77256804:-|nuORF	17.468008924990375	0.37786057458515737	5				NaN	NaN	0	NaN	9637	6691	16326
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16331	49.586	NaN	1250.5	30	0	377.78	0.033			+	11721	FSCLSTSN	8	31	429.6851953477995	NaN	0	429.6850891113281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FSCLSTSN_	REV__ENSG00000166822|ENST00000561878|TMEM170A;REV__nc|ENSG00000166822|Q8WVE7-2|TMEM170A	17.364965105453717	1.7418937515398478	5				NaN	NaN	0	NaN	9638	6691	16326
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16338	49.616	NaN	1162	30	0	248.15	0.143			+	13579	GLVAQLFIF	9	32	336.534274962631	NaN	0	336.5340576171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GLVAQLFIF_	REV__L1MC1_dup2137|chr3:11202598-11203364:-|2.548944203961612|0.3234029913481031|2.98|483.0|36|2|anti-sense	20.94693142431847	0.3660861156085067	5				NaN	NaN	0	NaN	9639	6697	16337
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16352	49.68	NaN	651.23	30	0	100.6	0.214				-1	CCMFCTMQ	8	36	491.6512756347656	NaN	0	491.6512756347656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_CCM(Oxidation (M))FCTMQ_	ENSG00000226430|ENST00000530447|USP17L7	8.231297230196988	1.7418937515398478	5				NaN	NaN	0	NaN	9641	6709	16351
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16353	49.684	NaN	672.52	30	0	73.228	0.106				-1	SVNNCGCH	8	28	445.6666259765625	NaN	0	445.6666259765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SVNNCGC(Carbamidomethyl (C))H_	ENST00000414718.1_1_20:12360810-12361446:+|nuORF	8.231297230196988	1.7418937515398478	5				NaN	NaN	0	NaN	9642	6709	16351
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16354	49.686	NaN	599.79	30	0	168.23	0.031			+	24432	LGCGSSNS	8	30	362.64902309592486	NaN	0	362.6490478515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LGCGSSNS_	REV__ABCA13|p.K3855Nfs*139|1|0.3|ENSG00000179869|chr7:48389131-48389153|GGCTGTGGTCCAAGACCTCAGCC/-|frameshift_variant	12.959181472943097	1.7418937515398478	5				NaN	NaN	0	NaN	9643	6709	16351
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16364	49.733	NaN	1629	30	0	111.95	0.143				-1	 	0	56	501.29146008567795	1000.5683672381559	2	501.2908020019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9644	6718	16363
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16368	49.75	NaN	930.14	30	0	97.034	0.144			+	48557	VTPIGAFVKGT	11	60	545.317764931265	1088.6209769293298	2	545.3165893554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTPIGAFVKGT_	REV__ENSG00000106278|ENST00000393386|PTPRZ1;REV__nc|ENSG00000106278|P23471-2|PTPRZ1	30.568863376406313	0.6691487505135859	5				NaN	NaN	0	NaN	9645	6721	16367
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16378	49.799	NaN	799.59	30	0	290.03	0.142			+	49404	VVTLCHLK	8	38	456.7715148925781	NaN	0	456.7715148925781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVTLCHLK_	REV__DDX60|p.F1672Lfs*25|1|0.08|ENSG00000137628|chr4:168220678-168220678|A/-|frameshift_variant;REV__DDX60|p.T1194Pfs*8|1|0.22|ENSG00000137628|chr4:168252634-168252634|T/-|frameshift_variant;REV__ENSG00000137628|ENST00000393743|DDX60	13.775330524044264	1.7418937515398478	5				NaN	NaN	0	NaN	9646	6730	16377
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16404	49.931	NaN	1661.4	30	0	1045.6	0.142				-1	PSNCPDLM	8	36	467.1938021805296	932.3730514278592	2	467.1927490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_PSNC(Carbamidomethyl (C))PDLM_	ENST00000472478.6_2_5:137493388-137493496:-|nuORF	19.359975847455235	0.7988239741663654	5				NaN	NaN	0	NaN	9648	6754	16403
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16408	49.948	NaN	925.05	30	0	229.52	0.214			+	28147	NALEPPCSS	9	32	459.204345703125	NaN	0	459.204345703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NALEPPCSS_	REV__ENSG00000174243|ENST00000308025|DDX23	14.864876125193954	0.3866709117995958	5				NaN	NaN	0	NaN	9649	6757	16407
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16409	49.951	NaN	934.83	30	0	66.875	0.106	+			30012	PPLGAPWLPV	10	49	523.8061400337411	1045.5977271342822	2	523.8056030273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PPLGAPWLPV_	ENSG00000160294|ENST00000291688|MCM3AP;ENST00000467026.5_1_21:47655184-47679082:-|nuORF;ENST00000486937.5_1_21:47655184-47666418:-|nuORF;ENST00000496607.5_1_21:47655184-47686088:-|nuORF;nc|ENSG00000160294|O60318-2|MCM3AP	24.519189625965996	0.6795976720565101	5				NaN	NaN	0	NaN	9650	6757	16407
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16410	49.953	NaN	273.81	30	0	57.684	0.03				-1	MDPNCSCT	8	21	329.1072998046875	NaN	0	329.1072998046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term),Carbamidomethyl (C),Oxidation (M)	_(Acetyl (Protein N-term))M(Oxidation (M))DPNC(Carbamidomethyl (C))SCT_	ENSG00000169688|ENST00000334346|MT1B;ENSG00000205364|ENST00000379818|MT1M	7.193352174278301	1.7418937515398478	5				NaN	NaN	0	NaN	9651	6757	16407
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16420	50	NaN	954.73	30	0	162.56	0.143	+			16566	HFHDKKIL	8	48	519.2985675398644	1036.5825821465287	2	519.2981567382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HFHDKKIL_	ENSG00000119723|ENST00000334571|COQ6;ENST00000553462.6_1_14:74416969-74422542:+|nuORF;ENST00000553922.5_1_14:74417278-74422293:+|nuORF;ENST00000554193.5_1_14:74417035-74422669:+|nuORF;ENST00000554217.5_1_14:74417035-74420277:+|nuORF;ENST00000554320.1_1_14:74417278-74422542:+|nuORF;ENST00000555196.5_1_14:74417278-74423148:+|nuORF;ENST00000555552.5_1_14:74417035-74423148:+|nuORF;ENST00000556300.6_1_14:74417008-74425067:+|nuORF;nc|ENSG00000119723|Q9Y2Z9-3|COQ6	51.33545320467046	0.5859736979383976	5				NaN	NaN	0	NaN	9652	6766	16419
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16431	50.05	NaN	222.88	30	0	46.28	0.138			+	42428	TAKYKQKI	8	16	327.20135691552593	NaN	0	327.2012939453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAKYKQKI_	REV__ENSG00000104537|ENST00000419625|ANXA13;REV__nc|ENSG00000104537|P27216-2|ANXA13	10.865556482863946	1.7418937515398478	5				NaN	NaN	0	NaN	9654	6775	16430
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16450	50.146	NaN	1067.3	30	0	58.366	0.214				-1	APAVLAPG	8	37	369.21248474164196	736.4104165500839	2	369.2117614746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))APAVLAPG_	ENSG00000105976|ENST00000397752|MET;MET|p.V13L|1|0.12|ENSG00000105976|chr7:116699121-116699121|G/C|missense_variant;nc|ENSG00000105976|P08581-2|MET;nc|ENSG00000105976|P08581-3|MET	10.184766708764876	0.7843118145031319	5				NaN	NaN	0	NaN	9655	6793	16449
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16451	50.15	NaN	1106.7	30	0	113.72	0.036				-1	MLAVVKCIR	9	54	545.317764931265	1088.6209769293298	2	545.3159790039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_MLAVVKC(Carbamidomethyl (C))IR_	ENSG00000197043|ENST00000354546|ANXA6;nc|ENSG00000197043|P08133-2|ANXA6	18.324413293986947	0.6112419832031293	5				NaN	NaN	0	NaN	9656	6793	16449
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16479	50.291	NaN	1939.6	30	0	80.604	0.143				-1	 	0	66	523.304957278435	1044.59536162367	2	523.3047485351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9657	6820	16478
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16486	50.323	NaN	712	30	0	67.823	0.145	+			18298	IPPKATPEPAI	11	51	567.3315072836151	1132.6484616340301	2	567.8331298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IPPKATPEPAI_	ENSG00000188112|ENST00000341865|C6orf132	23.52269567125451	0.7430573033454468	5				NaN	NaN	0	NaN	9658	6826	16485
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16494	50.356	NaN	1464.2	30	0	789.74	0.141	+			28550	NITPPTII	8	41	434.7602684770758	867.5059840209516	2	434.7594909667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NITPPTII_	NRP2|p.A109T|1|0.09|ENSG00000118257|chr2:205716266-205716266|G/A|missense_variant	24.20275056022122	0.7724576178584145	5				NaN	NaN	0	NaN	9660	6832	16493
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16519	50.483	NaN	922.05	30	0	65.182	0.144			+	-1	VVKARLPFC	9	60	545.3178100585938	NaN	0	545.3178100585938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_VVKARLPFC(Carbamidomethyl (C))_	REV__ENSG00000121853|ENST00000241256|GHSR;REV__nc|ENSG00000121853|Q92847-2|GHSR	24.20275056022122	0.35506675290109213	5				NaN	NaN	0	NaN	9661	6856	16518
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16544	50.611	NaN	4064.6	30	0	2291.2	0.14			+	46892	VIPVKATT	8	48	414.76263127113805	827.5107096090761	2	414.76190185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VIPVKATT_	REV__ENSG00000083223|ENST00000375963|TUT7;REV__ENSG00000134744|ENST00000257177|TUT4;REV__ENST00000481528.1_1_1:52926763-52927313:-|nuORF;REV__nc|ENSG00000083223|Q5VYS8-4|TUT7;REV__nc|ENSG00000083223|Q5VYS8-6|TUT7;REV__nc|ENSG00000134744|Q5TAX3|TUT4	29.841539824830324	0.7289191502596711	5				NaN	NaN	0	NaN	9662	6880	16543
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16548	50.628	NaN	1680.3	30	0	122.93	0.143				-1	 	0	72	523.304957278435	1044.59536162367	2	523.3045043945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9663	6883	16547
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16552	50.645	NaN	1012.6	30	0	174.97	0.143	+			3007	ASFDKAKLK	9	28	336.53472900390625	NaN	0	336.53472900390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASFDKAKLK_	ENSG00000034510|ENST00000233143|TMSB10	23.04248740728303	0.3589936788096251	5				NaN	NaN	0	NaN	9664	6886	16551
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16556	50.661	NaN	1521.4	30	0	54.364	0.145			+	37837	SNFKELAILV	10	64	567.331019270047	1132.647485606894	2	567.3311157226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SNFKELAILV_	REV__tr|U7SMP9|U7SMP9_FUSNUHeptaprenyldiphosphatesynthaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01776PE=4SV=1	20.94693142431847	0.7087701759873708	5				NaN	NaN	0	NaN	9665	6889	16555
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16597	50.869	NaN	1927.9	30	0	102.94	0.144				-1	 	0	65	545.3179525325686	544.3106760659686	1	545.317626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9667	6928	16596
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16623	50.998	NaN	913.63	30	0	73.295	0.143				-1	 	0	53	523.304957278435	1044.59536162367	2	523.3048095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9669	6952	16622
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16630	51.031	NaN	1371.9	30	0	88.203	0.145			+	11149	FGICIIITAAL	11	63	567.8324584960938	NaN	0	567.8324584960938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FGICIIITAAL_	REV__ENSG00000151812|ENST00000556826|SLC35F4;REV__nc|ENSG00000151812|A4IF30-2|SLC35F4;REV__nc|ENSG00000151812|A4IF30|SLC35F4	27.882242232435846	0.44115667141176046	5				NaN	NaN	0	NaN	9670	6958	16629
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16661	51.191	NaN	1278.5	30	0	97.914	0.145				-1	CLLMLLKQPHS	11	51	678.361572265625	NaN	0	678.361572265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_C(Carbamidomethyl (C))LLM(Oxidation (M))LLKQPHS_	ENST00000339437.10_1_3:3171710-3171836:+|nuORF	24.519189625965996	0.45614437233802635	5				NaN	NaN	0	NaN	9671	6988	16660
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16665	51.207	NaN	2653.3	30	0	160.74	0.144				-1	 	0	71	545.3179525325686	544.3106760659686	1	545.3175659179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9672	6991	16664
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16676	51.256	NaN	817.69	30	0	164.07	0.143			+	46875	VILRTFAST	9	25	336.53434913785907	NaN	0	336.5343933105469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VILRTFAST_	REV__ENSG00000120156|ENST00000380036|TEK;REV__nc|ENSG00000120156|Q02763-2|TEK;REV__nc|ENSG00000120156|Q02763-3|TEK;REV__TEK|p.E624Nfs*33|1|0.41|ENSG00000120156|chr9:27197556-27197556|G/-|frameshift_variant;REV__TEK|p.N809Tfs*21|1|0.22|ENSG00000120156|chr9:27206639-27206639|A/-|frameshift_variant;REV__TEK|p.N884Kfs*6|1|0.16|ENSG00000120156|chr9:27209197-27209197|C/-|frameshift_variant;REV__TEK|p.P417Lfs*10|1|0.71|ENSG00000120156|chr9:27185547-27185547|C/-|frameshift_variant;REV__TEK|p.S586Vfs*12|1|0.27|ENSG00000120156|chr9:27197441-27197441|A/-|frameshift_variant	12.206847966760668	0.39566704307768535	5				NaN	NaN	0	NaN	9674	7000	16675
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16695	51.352	NaN	1266	30	0	198.11	0.14	+			9818	EPGLVPLG	8	46	391.22550246712126	780.4364520010425	2	391.2255554199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EPGLVPLG_	ENSG00000177595|ENST00000347755|PIDD1;ENST00000524486.5_1_11:799309-803120:-|nuORF;ENST00000527357.5_1_11:801679-803120:-|nuORF;ENST00000534525.5_1_11:799959-803120:-|nuORF;nc|ENSG00000177595|Q9HB75-2|PIDD1;nc|ENSG00000177595|Q9HB75-3|PIDD1;nc|ENSG00000177595|Q9HB75-4|PIDD1;nc|ENSG00000177595|Q9HB75-5|PIDD1;nc|ENSG00000177595|Q9HB75-7|PIDD1	23.036711822280957	0.7814608874307191	5				NaN	NaN	0	NaN	9675	7018	16694
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16705	51.401	NaN	736.41	30	0	46.929	0.145			+	18221	INISSIIFLN	10	47	567.3310430407549	NaN	0	567.3312377929688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_INISSIIFLN_	REV__ENST00000273963.9_1_4:88081861-88081957:-|nuORF	20.83715455343099	0.4201028297492154	5				NaN	NaN	0	NaN	9676	7027	16704
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16718	51.465	NaN	1084.9	30	0	313.35	0.142			+	46716	VGLVPLLSD	9	35	456.77249642022554	NaN	0	456.7724304199219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VGLVPLLSD_	REV__ENSG00000103047|ENST00000261778|TANGO6	25.450171626174864	0.34907449758287085	5				NaN	NaN	0	NaN	9677	7039	16717
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16725	51.498	NaN	1599.1	30	0	94.888	0.145	+			13163	GGTAKLPHQRL	11	64	589.3441212045774	1176.6736894759547	2	589.3438720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GGTAKLPHQRL_	ENSG00000100605|ENST00000267615|ITPK1	38.753607047826485	0.5749975102143227	5				NaN	NaN	0	NaN	9678	7045	16724
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16735	51.546	NaN	1791.7	30	0	90.007	0.144				-1	 	0	72	545.3179525325686	544.3106760659686	1	545.3182983398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9679	7054	16734
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16748	51.612	NaN	846.54	30	0	224.24	0.138				-1	 	0	25	334.1651454123487	666.3157378914974	2	334.16497802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9680	7066	16747
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16752	51.628	NaN	368.39	30	0	136.57	0.138	+			37847	SNLLIQMSA	9	16	326.17592362337973	NaN	0	326.1436462402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SNLLIQMSA_	ENSG00000168434|ENST00000307149|COG7	17.364965105453717	0.37820932774828947	5				NaN	NaN	0	NaN	9681	7069	16751
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16756	51.645	NaN	2810.9	30	0	1311.9	0.141			+	18177	ILVILTSN	8	52	436.7757744569682	871.5369959807364	2	436.7749938964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ILVILTSN_	REV__ENSG00000174914|ENST00000642097|OR9G1	38.80614096846853	0.6637206697844082	5				NaN	NaN	0	NaN	9682	7072	16755
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16775	51.741	NaN	2477.7	30	0	128.89	0.145			+	-1	VQVKRMIML	9	70	567.330244067379	1132.645935201558	2	567.330810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_VQVKRMIM(Oxidation (M))L_	REV__ENST00000489282.1_1_1:59158492-59165724:-|nuORF	23.04248740728303	0.5879033540491928	5				NaN	NaN	0	NaN	9683	7090	16774
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16812	51.934	NaN	1087.3	30	0	74.112	0.145			+	-1	EIKGFKCVKI	10	50	611.3551558420612	NaN	0	611.3545532226562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_EIKGFKC(Carbamidomethyl (C))VKI_	REV__BMPER|p.N305Kfs*25|1|0.05|ENSG00000164619|chr7:34055289-34055290|-/AAATAGAAATT|frameshift_variant	22.579656572578934	0.4201028297492154	5				NaN	NaN	0	NaN	9684	7126	16811
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16816	51.95	NaN	1038.2	30	0	195.22	0.143	+			4199	ATFTIQKKA	9	33	336.5341702719479	NaN	0	336.53387451171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATFTIQKKA_	ENSG00000197603|ENST00000651892|CPLANE1;ENST00000509849.5_1_5:37107706-37125531:-|nuORF;nc|ENSG00000197603|Q9H799|CPLANE1	16.473147378115264	0.38122769658151995	5				NaN	NaN	0	NaN	9685	7129	16815
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16843	52.08	NaN	2786.7	30	0	107.23	0.144	+			19712	KDSVKKLGTGT	11	78	567.330244067379	1132.645935201558	2	567.3306884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KDSVKKLGTGT_	ASH1L|p.H1793Ifs*7|1|0.13|ENSG00000116539|chr1:155438778-155438778|G/-|frameshift_variant;ASH1L|p.I970Lfs*9|1|0.2|ENSG00000116539|chr1:155479962-155479962|T/-|frameshift_variant;ASH1L|p.K1222Rfs*11|4|0.27|ENSG00000116539|chr1:155479205-155479205|T/-|frameshift_variant;ASH1L|p.K1533Sfs*17|1|0.25|ENSG00000116539|chr1:155478272-155478272|T/-|frameshift_variant;ASH1L|p.K2377Nfs*5|1|0.28|ENSG00000116539|chr1:155354570-155354570|T/-|frameshift_variant;ASH1L|p.N1822Tfs*2|1|0.33|ENSG00000116539|chr1:155438690-155438690|T/-|frameshift_variant;ASH1L|p.R712Efs*23|3|0.35|ENSG00000116539|chr1:155480736-155480736|T/-|frameshift_variant;ASH1L|p.S2309Ifs*11|1|0.64|ENSG00000116539|chr1:155357635-155357636|-/T|frameshift_variant;ENSG00000116539|ENST00000392403|ASH1L;nc|ENSG00000116539|Q9NR48|ASH1L	27.047317107675042	0.7060868989289394	5				NaN	NaN	0	NaN	9688	7153	16842
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16847	52.097	NaN	1029.3	30	0	454.12	0.14				-1	ASCSCWPCMS	10	33	396.8011527715567	NaN	0	396.8017272949219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_ASC(Carbamidomethyl (C))SC(Carbamidomethyl (C))WPCMS_	ENST00000322128.4_1_8:98288239-98288629:-|nuORF	20.83715455343099	0.4201028297492154	5				NaN	NaN	0	NaN	9689	7156	16846
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16890	52.319	NaN	1539.9	30	0	92.066	0.146	+			32563	QVVRHVINSAV	11	58	611.3562447207689	1220.6979365083378	2	611.3554077148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QVVRHVINSAV_	ENST00000527071.1_1_8:145254030-145268916:+|nuORF	17.468008924990375	0.788697330333842	5				NaN	NaN	0	NaN	9690	7198	16889
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16906	52.399	NaN	1331.9	30	0	106.77	0.14				-1	LARGPRGG	8	54	413.23825991373656	824.4619668942731	2	413.23785400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LARGPRGG_	ENST00000356447.8_1_3:24270456-24536172:-|nuORF;REV__ENST00000598244.5_1_19:58962997-58963642:+|nuORF	9.47055586587303	0.7831821681235687	5				NaN	NaN	0	NaN	9691	7213	16905
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16910	52.416	NaN	1684.8	30	0	102.27	0.145			+	31984	QRDRHVPLL	9	56	567.330244067379	1132.645935201558	2	567.3305053710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QRDRHVPLL_	REV__ENST00000536349.5_1_9:139999728-140000091:+|nuORF	21.9598887501803	0.5980208138527809	5				NaN	NaN	0	NaN	9692	7216	16909
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16927	52.497	NaN	1242.3	30	0	91.758	0.145				-1	 	0	59	589.3431606225702	1176.6717683119402	2	589.3440551757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9694	7231	16926
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16955	52.643	NaN	1763.7	30	0	465.66	0.142				-1	 	0	51	458.7880615873895	915.561570241579	2	458.78851318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9695	7258	16954
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16977	52.756	NaN	880.01	30	0	42.481	0.145			+	-1	MMPTKKILR	9	51	567.330244067379	1132.645935201558	2	567.3301391601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))MPTKKILR_	REV__ENST00000392859.7_1_11:118471445-118471652:+|nuORF	17.364965105453717	0.6112419832031293	5				NaN	NaN	0	NaN	9696	7279	16976
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	16993	52.836	NaN	2966.4	30	0	133.91	0.145			+	43687	TKGKTSVTKLD	11	76	589.3431606225702	1176.6717683119402	2	589.34326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TKGKTSVTKLD_	REV__COL17A1|p.P1229Rfs*22|1|0.39|ENSG00000065618|chr10:104034701-104034701|G/-|frameshift_variant;REV__COL17A1|p.P847Qfs*219|1|0.17|ENSG00000065618|chr10:104042431-104042431|G/-|frameshift_variant;REV__ENSG00000065618|ENST00000648076|COL17A1;REV__nc|ENSG00000065618|Q9UMD9-2|COL17A1	27.047317107675042	0.7060868989289394	5				NaN	NaN	0	NaN	9697	7294	16992
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	17030	53.027	NaN	882.62	30	0	162.75	0.143				-1	ASMKKVKSL	9	30	336.53399658203125	NaN	0	336.53399658203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ASM(Oxidation (M))KKVKSL_	ENST00000369426.9_1_1:119575536-119588262:-|nuORF	14.864876125193954	0.3866709117995958	5				NaN	NaN	0	NaN	9698	7330	17029
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	17037	53.059	NaN	1266.2	30	0	82.673	0.145	+			17173	HTNKIGRLDLV	11	71	633.3690733121507	1264.7235936911013	2	633.3699951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HTNKIGRLDLV_	ENSG00000180113|ENST00000316081|TDRD6;nc|ENSG00000180113|O60522-2|TDRD6;TDRD6|p.L1636Qfs*6|1|0.06|ENSG00000180113|chr6:46693034-46693035|-/AAAG|frameshift_variant	31.634271133179894	0.6579734920221648	5				NaN	NaN	0	NaN	9699	7336	17036
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	17059	53.173	NaN	1756.4	30	0	77.262	0.145				-1	 	0	61	589.3431606225702	1176.6717683119402	2	589.343505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9700	7357	17058
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	17078	53.269	NaN	1363.8	30	0	73.5	0.145			+	33856	RRHNRKNQL	9	69	611.3558242237705	1220.6970955143408	2	611.355712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RRHNRKNQL_	REV__ENSG00000198822|ENST00000361669|GRM3;REV__GRM3|p.K437Vfs*13|1|0.07|ENSG00000198822|chr7:86787099-86787100|-/CGTA|frameshift_variant;REV__nc|ENSG00000198822|Q14832-2|GRM3	24.20275056022122	0.577060078256802	5				NaN	NaN	0	NaN	9701	7375	17077
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	17118	53.475	NaN	999.98	30	0	65.134	0.141	+			25067	LLLGVPEE	8	49	435.25124673936426	868.4879405455285	2	435.2505798339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LLLGVPEE_	ENST00000269280.8_2_17:5487188-5487734:-|nuORF	21.70233525837049	0.7917639344264583	5				NaN	NaN	0	NaN	9702	7414	17117
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	17140	53.588	NaN	1257.9	30	0	393.77	0.142				-1	 	0	48	480.80113901256186	959.5877250919237	2	480.8000183105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9703	7435	17139
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	17144	53.604	NaN	2969	30	0	131.09	0.145				-1	 	0	78	611.3558242237705	1220.6970955143408	2	611.3565063476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9704	7438	17143
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	17148	53.621	NaN	1817	30	0	613.59	0.139				-1	MECCCCCC	8	38	356.74633217225346	NaN	0	356.7465515136719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	3 Carbamidomethyl (C)	_MEC(Carbamidomethyl (C))CCCC(Carbamidomethyl (C))C(Carbamidomethyl (C))_	ENSG00000170775|ENST00000303921|GPR37	7.690282842768113	1.7418937515398478	5				NaN	NaN	0	NaN	9705	7441	17147
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	17152	53.638	NaN	1775.5	30	0	100.37	0.145	+			7971	DSTLIMQLLR	10	57	603.3323129850023	NaN	0	603.3325805664062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_DSTLIM(Oxidation (M))QLLR_	ENSG00000108953|ENST00000264335|YWHAE;ENSG00000128245|ENST00000248975|YWHAH;ENSG00000134308|ENST00000238081|YWHAQ;ENSG00000164924|ENST00000395958|YWHAZ;ENSG00000166913|ENST00000353703|YWHAB;ENSG00000170027|ENST00000307630|YWHAG;ENSG00000175793|ENST00000339276|SFN;ENST00000397492.1_1_22:32346295-32352776:+|nuORF;ENST00000399764.3_1_9:34922183-34922564:-|nuORF;ENST00000479421.5_2_20:43531717-43535076:+|nuORF;ENST00000480304.5_1_8:101936173-101961117:-|nuORF;nc|ENSG00000108953|P62258-2|YWHAE;nc|ENSG00000164924|P63104-2|YWHAZ;nc|ENSG00000166913|P31946-2|YWHAB;nc|ENSG00000175793|P31947-2|SFN	75.04331003522576	0.12385377892588857	5				NaN	NaN	0	NaN	9706	7444	17151
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	17210	53.942	NaN	1386.4	30	0	68.692	0.145			+	47424	VPRHRRRSAS	10	69	611.3558242237705	1220.6970955143408	2	611.3563232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VPRHRRRSAS_	REV__ENST00000243286.7_1_X:102862879-102862993:+|nuORF;REV__ENST00000372627.9_1_X:102862900-102863565:+|nuORF	19.996771675451527	0.7148376616046445	5				NaN	NaN	0	NaN	9707	7501	17209
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	17229	54.036	NaN	1531.9	30	0	84.879	0.145	+			50880	YFLILFSIHL	10	76	633.3687637120128	1264.7229744908254	2	633.36865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YFLILFSIHL_	ABCA10|p.I1054Yfs*16|1|0.22|ENSG00000154263|chr17:69174283-69174284|-/A|frameshift_variant;ENSG00000154263|ENST00000690296|ABCA10;ENST00000522406.5_1_17:67144970-67178294:-|nuORF;nc|ENSG00000154263|Q8WWZ4-2|ABCA10	23.04248740728303	0.69165701907106	5				NaN	NaN	0	NaN	9708	7519	17228
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	17293	54.37	NaN	931.83	30	0	314.71	0.142				-1	 	0	34	453.34282925527583	904.6711055773517	2	453.3432922363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9709	7582	17292
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	17297	54.386	NaN	1531.7	30	0	109.89	0.146				-1	 	0	67	633.3687637120128	1264.7229744908254	2	633.369384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	5				NaN	NaN	0	NaN	9710	7585	17296
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	17310	54.449	NaN	1051.3	30	0	90.975	0.142			+	-1	PPLKKPMS	8	50	457.2637258295813	NaN	0	457.2642517089844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_PPLKKPM(Oxidation (M))S_	REV__tr|U7T201|U7T201_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00705PE=4SV=1	26.79610172149135	1.7418937515398478	5				NaN	NaN	0	NaN	9711	7597	17309
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	17332	54.561	NaN	1163.7	30	0	155.6	0.143			+	47054	VLFVGFLPI	9	50	502.8135383655991	NaN	0	502.81378173828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VLFVGFLPI_	REV__ENSG00000181752|ENST00000313447|OR8K5	21.70233525837049	0.3635294413921169	5				NaN	NaN	0	NaN	9712	7618	17331
200727_Lumos_FAIMS_CID_IT_CVSet3_1ul_172T	17630	56.227	NaN	1370	30	0	121.94	0.145	+			37530	SLLQPLNVEID	11	54	620.8427437601531	NaN	0	620.84326171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLLQPLNVEID_	CON__ENSEMBL:ENSBTAP00000038253;CON__P04264;CON__P12035;CON__Q01546;ENSG00000167768|ENST00000252244|KRT1;ENSG00000185069|ENST00000332411|KRT76;ENSG00000186442|ENST00000417996|KRT3	47.227680397652996	0.33523056580093125	5				NaN	NaN	0	NaN	9713	7915	17629
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2053	10.808	NaN	1298.6	30	0	357.66	0.145	+			19512	KAVKKTPKKA	10	39	549.8721314449779	1097.7297099567556	2	549.8732299804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAVKKTPKKA_	ENSG00000184357|ENST00000331442|H1-5	46.45678178249821	0.4896490706773647	6				NaN	NaN	0	NaN	17	2034	2052
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2103	11.018	NaN	3198.1	30	0	1013.9	0.147				-1	HVPCRGLGTVK	11	40	408.5620948171977	NaN	0	408.5622253417969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_HVPC(Carbamidomethyl (C))RGLGTVK_	ENST00000482786.5_1_2:46815246-46815330:-|nuORF;nc|ENSG00000151665|Q07326-2|PIGF	28.5767321226876	0.4380616241468488	6				NaN	NaN	0	NaN	28	2073	2102
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2119	11.083	NaN	2173.6	30	0	434.87	0.142	+			19491	KATGAATPKK	10	53	486.7960265673043	971.5775002014086	2	486.7965087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KATGAATPKK_	ENSG00000168298|ENST00000304218|H1-4	80.91624569148213	0.18813531420570515	6				NaN	NaN	0	NaN	32	2085	2118
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2123	11.099	NaN	1582.1	30	0	297.87	0.143			+	19411	KAPKASPAKK	10	36	513.327659307529	1024.6407656818578	2	513.3279418945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAPKASPAKK_	REV__ENSG00000155761|ENST00000336338|SPAG17;REV__SPAG17|p.L1608Ifs*4|1|0.34|ENSG00000155761|chr1:117996698-117996699|-/T|frameshift_variant;REV__SPAG17|p.Q1264Rfs*3|1|0.29|ENSG00000155761|chr1:118025357-118025357|G/-|frameshift_variant;REV__SPAG17|p.T1729Lfs*21|2|0.43|ENSG00000155761|chr1:117992642-117992642|T/-|frameshift_variant	92.23892857375223	0.11825556496531454	6				NaN	NaN	0	NaN	33	2088	2122
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2138	11.152	NaN	5566.4	30	0	2150	0.142	+			4515	ATKKPAPEK	9	54	485.29044464696955	968.5663363607391	2	485.29022216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATKKPAPEK_	ENSG00000174444|ENST00000307961|RPL4;ENST00000422486.1_1_3:185135285-185135612:-|nuORF;ENST00000567229.5_1_15:66791747-66793486:-|nuORF	117.81106730687013	0.02252488733980868	6				NaN	NaN	0	NaN	39	2097	2137
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2178	11.302	NaN	9083.8	30	0	3664.7	0.142	+			19215	KAAGAGKVTK	10	57	465.79002049508495	NaN	0	465.7901306152344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAAGAGKVTK_	ENSG00000156508|ENST00000309268|EEF1A1;ENST00000359165.5_1_12:19609181-19609565:-|nuORF;ENST00000436459.2_1_9:135895553-135896258:+|nuORF;ENST00000447052.1_1_21:24762753-24763314:+|nuORF;ENST00000547505.2_1_12:44054544-44054901:+|nuORF;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	109.43880257439609	0.012705359521079733	6				NaN	NaN	0	NaN	52	2124	2177
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2188	11.336	NaN	2644.9	30	0	803.56	0.143	+			42413	TAKPKAAKPK	10	41	520.3354295488011	1038.6563061644022	2	520.8373413085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAKPKAAKPK_	ENSG00000168298|ENST00000304218|H1-4	53.59686742100583	0.4240759338601513	6				NaN	NaN	0	NaN	56	2130	2187
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2218	11.429	NaN	26442	30	0	9680.8	0.214	+			22902	KVMKDAKTK	9	75	350.2110906604344	1047.6114425815033	3	350.2111511230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVMKDAKTK_	ENSG00000198900|ENST00000361337|TOP1	72.87924865735499	0.12833875048249987	6				NaN	NaN	0	NaN	71	2145	2217
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2219	11.433	NaN	1140.1	30	0	458.85	0.034	+			20642	KGHGGARPSP	10	37	482.25965092700056	NaN	0	482.26092529296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KGHGGARPSP_	ENST00000427323.5_1_3:38388271-38390057:+|nuORF	42.86426827375447	0.3507156137006061	6				NaN	NaN	0	NaN	72	2145	2217
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2238	11.481	NaN	4994.7	30	0	1032.9	0.142	+			44874	TTVKPGAKK	9	57	465.2925981827231	928.5706434322462	2	465.292236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTVKPGAKK_	ENSG00000106541|ENST00000419304|AGR2	84.9155231211612	0.07920012719736333	6				NaN	NaN	0	NaN	85	2151	2237
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2256	11.538	NaN	1947.5	30	0	1113.4	0.214	+			21625	KPRLNQLY	8	22	516.3019000960924	NaN	0	516.3014526367188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KPRLNQLY_	ENSG00000076924|ENST00000358368|XAB2;ENST00000595288.5_1_19:7692923-7693151:-|nuORF;XAB2|p.A48T|1|0.2|ENSG00000076924|chr19:7628208-7628208|C/T|missense_variant	19.359975847455235	1.7418937515398478	6				NaN	NaN	0	NaN	94	2160	2255
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2257	11.542	NaN	1059.4	30	0	225.82	0.106			+	44886	TTVRTVFK	8	33	476.2832493652353	950.5519457972706	2	476.28363037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTVRTVFK_	REV__ENSG00000162894|ENST00000367091|FCMR;REV__nc|ENSG00000162894|O60667-2|FCMR;REV__nc|ENSG00000162894|O60667-3|FCMR	63.30626980617807	0.4690498839812213	6				NaN	NaN	0	NaN	95	2160	2255
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2258	11.544	NaN	1864.8	30	0	397.43	0.035	+			422	AATKKPAPEK	10	50	520.8089906120658	1039.6034282909316	2	520.8085327148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AATKKPAPEK_	ENSG00000174444|ENST00000307961|RPL4;ENST00000422486.1_1_3:185135285-185135612:-|nuORF;ENST00000567229.5_1_15:66791747-66793486:-|nuORF	65.15724298150197	0.31893571707528906	6				NaN	NaN	0	NaN	96	2160	2255
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2289	11.611	NaN	2150.6	30	0	504.3	0.141	+			19231	KAALKQLQ	8	45	450.287173651364	898.559794369528	2	450.28729248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAALKQLQ_	ENSG00000047410|ENST00000367478|TPR;nc|ENSG00000047410|P12270-2|TPR;TPR|p.E1141Dfs*29|1|0.08|ENSG00000047410|chr1:186344085-186344086|-/CAGGTAAA|frameshift_variant;TPR|p.P2083Qfs*3|1|0.31|ENSG00000047410|chr1:186323735-186323735|G/-|frameshift_variant;TPR|p.T2133Lfs*63|1|0.03|ENSG00000047410|chr1:186322382-186322383|-/GTACTAATAAG|frameshift_variant;TPR|p.V1142Efs*26|1|0.08|ENSG00000047410|chr1:186344083-186344084|-/TT|frameshift_variant	73.97473282117947	0.3737790450121076	6				NaN	NaN	0	NaN	121	2166	2288
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2302	11.641	NaN	10769	30	0	2222.3	0.214	+			42888	TEHAKRKTV	9	47	357.2085649367551	1068.6038654104655	3	357.20843505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEHAKRKTV_	ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000275663|ENST00000611444|H4C7;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2	21.9598887501803	0.5980208138527809	6				NaN	NaN	0	NaN	131	2169	2301
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2303	11.644	NaN	539.94	30	0	103.72	0.035			+	18395	IRMMLLKK	8	24	516.8248901367188	NaN	0	516.8248901367188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IRMMLLKK_	REV__ENST00000344293.5_1_10:7866412-8006047:+|nuORF	33.51558372728122	1.7418937515398478	6				NaN	NaN	0	NaN	132	2169	2301
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2319	11.685	NaN	4892.4	30	0	1308.7	0.144	+			14738	GTKAQVERK	9	58	339.533181116381	NaN	0	339.5331115722656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTKAQVERK_	ENSG00000158769|ENST00000368026|F11R;ENST00000335772.3_1_1:160972398-160990872:-|nuORF;ENST00000602966.1_1_1:160970859-160990872:-|nuORF;nc|ENSG00000158769|Q9Y624-2|F11R	54.722347961057174	0.17414871455573902	6				NaN	NaN	0	NaN	142	2175	2318
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2337	11.742	NaN	1630.7	30	0	473.05	0.145			+	4802	ATNRERLSK	9	27	358.872064845815	1073.594365137645	3	358.8721618652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATNRERLSK_	REV__ENST00000354960.7_1_4:120550015-120550123:-|nuORF	44.377184641726394	0.36891676396732553	6				NaN	NaN	0	NaN	151	2184	2336
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2358	11.803	NaN	1077.1	30	0	278.94	0.144			+	-1	EGDTVIVMVK	10	35	553.7935481360566	1105.5725433389132	2	553.794189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_EGDTVIVM(Oxidation (M))VK_	REV__ENSG00000213949|ENST00000282588|ITGA1;REV__ITGA1|p.F633Lfs*11|1|0.19|ENSG00000213949|chr5:52915500-52915500|T/-|frameshift_variant;REV__ITGA1|p.N687Kfs*19|1|0.18|ENSG00000213949|chr5:52918798-52918799|-/A|frameshift_variant	27.882242232435846	0.6521336255503853	6				NaN	NaN	0	NaN	163	2193	2357
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2370	11.83	NaN	35524	30	0	6717.5	0.143			+	21039	KKKQAGSKK	9	74	501.8252967339377	1001.6360405346754	2	501.8250427246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KKKQAGSKK_	REV__ENSG00000248712|ENST00000503566|CCDC153;REV__ENST00000375140.7_1_11:119064239-119066706:-|nuORF	154.1183686248401	0.005909203230691971	6				NaN	NaN	0	NaN	172	2196	2369
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2388	11.867	NaN	6716.5	30	0	2049.9	0.214	+			34676	RVSNVDHNK	9	54	534.7812917076286	1067.5480304820571	2	534.7811889648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVSNVDHNK_	ENSG00000112651|ENST00000388752|MRPL2;ENST00000485654.1_1_6:43022014-43023405:-|nuORF;MRPL2|p.M292*|1|0.49|ENSG00000112651|chr6:43054319-43054319|G/-|frameshift_variant;OBSL1-MRPL2|1|fusion	65.46538089061403	0.16805504838372562	6				NaN	NaN	0	NaN	187	2199	2387
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2389	11.871	NaN	923.87	30	0	213.63	0.106	+			50157	WKNNGNVNS	9	40	516.7485037636532	NaN	0	516.7485961914062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WKNNGNVNS_	ENSG00000160753|ENST00000368352|RUSC1;nc|ENSG00000160753|Q9BVN2-4|RUSC1;RUSC1|p.V332Sfs*13|1|0.21|ENSG00000160753|chr1:155322767-155322767|G/-|frameshift_variant	44.377184641726394	0.24544280798894275	6				NaN	NaN	0	NaN	188	2199	2387
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2390	11.873	NaN	794.53	30	0	202.17	0.034	+			44875	TTVKPGAKK	9	36	465.29229727331864	928.5700416134373	2	465.7933044433594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TTVKPGAKK_	ENSG00000106541|ENST00000419304|AGR2	51.33545320467046	0.2872990594074956	6				NaN	NaN	0	NaN	189	2199	2387
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2395	11.886	NaN	3743.7	30	0	903.28	0.214	+			3138	ASHREMTSK	9	64	523.7563253082184	1045.4980976832367	2	523.7565307617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASHREMTSK_	ENSG00000150593|ENST00000280154|PDCD4;ENST00000462577.5_1_10:112645037-112653861:+|nuORF;nc|ENSG00000150593|Q53EL6-2|PDCD4	81.52500206392136	0.09095445986635249	6				NaN	NaN	0	NaN	191	2202	2394
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2396	11.89	NaN	111.5	30	0	24.834	0.106			+	13107	GGFIVGLALL	10	7	480.2977422829198	NaN	0	480.297607421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GGFIVGLALL_	REV__nc|ENSG00000114948|O75077-2|ADAM23	3.6843469609004	0.4201028297492154	6				NaN	NaN	0	NaN	192	2202	2394
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2397	11.892	NaN	1009.4	30	0	273.67	0.044				-1	RMKNKLWYFEF	11	33	526.603759765625	NaN	0	526.603759765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_RM(Oxidation (M))KNKLWYFEF_	DGKG|p.M663Ifs*17|1|0.04|ENSG00000058866|chr3:186188308-186188308|C/-|frameshift_variant;ENSG00000058866|ENST00000265022|DGKG;ENSG00000065357|ENST00000331886|DGKA;ENST00000480809.5_1_3:185925300-186038248:-|nuORF;ENST00000551739.5_1_12:56345656-56346257:+|nuORF;nc|ENSG00000058866|P49619-2|DGKG;nc|ENSG00000058866|P49619-3|DGKG	14.086013023434994	0.456735970842152	6				NaN	NaN	0	NaN	193	2202	2394
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2410	11.917	NaN	5044.8	30	0	1754.2	0.214			+	31946	QQQQQKKT	8	56	508.7779332690167	1015.5413136048335	2	508.77801513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QQQQQKKT_	REV__ENSG00000169230|ENST00000303204|PRELID1;REV__ENST00000503853.1_1_5:176733373-176733568:+|nuORF;REV__ENST00000567272.1_1_6:126965256-126965442:+|nuORF;REV__nc|ENSG00000169230|Q9Y255-2|PRELID1	82.30502934623384	0.30436709589983096	6				NaN	NaN	0	NaN	203	2205	2409
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2411	11.921	NaN	1317.8	30	0	377.13	0.106	+			31268	QHSGFSSRAL	10	29	545.2760009765625	NaN	0	545.2760009765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QHSGFSSRAL_	ENST00000296149.8_1_3:47555066-47555204:-|nuORF	14.137123925751023	0.4201028297492154	6				NaN	NaN	0	NaN	204	2205	2409
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2412	11.923	NaN	4551.1	30	0	2559.8	0.106	+			41151	SVKCPSLLA	9	32	325.517427462508	NaN	0	325.5173645019531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SVKC(Carbamidomethyl (C))PSLLA_	ENSG00000122707|ENST00000377966|RECK	40.77816245573522	0.2702456086868081	6				NaN	NaN	0	NaN	205	2205	2409
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2413	11.925	NaN	3319.9	30	0	348.54	0.036	+			7031	CSLASPLVAV	10	53	339.5210876464844	NaN	0	339.5210876464844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_C(Carbamidomethyl (C))SLASPLVAV_	ENST00000269321.11_1_17:79826257-79826755:-|nuORF	65.46538089061403	0.18964705739380194	6				NaN	NaN	0	NaN	206	2205	2409
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2431	11.961	NaN	15993	30	0	6342.6	0.214	+			34938	SAAKAVKPK	9	62	450.2873637667427	898.5601746002854	2	450.287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAAKAVKPK_	ENSG00000187837|ENST00000343677|H1-2	96.0336014099291	0.047854655524928534	6				NaN	NaN	0	NaN	221	2208	2430
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2432	11.964	NaN	1162.2	30	0	620.76	0.106			+	31244	QHGALGLIL	9	32	461.2781982421875	NaN	0	461.2781982421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QHGALGLIL_	REV__POLG|p.T326Hfs*62|1|0.16|ENSG00000140521|chr15:89328990-89328991|-/G|frameshift_variant	19.359975847455235	0.3714571876404798	6				NaN	NaN	0	NaN	222	2208	2430
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2433	11.966	NaN	231.73	30	0	45.838	0.106			+	21560	KNYPELLL	8	19	495.2852783203125	NaN	0	495.2852783203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KNYPELLL_	REV__ENSG00000100345|ENST00000216181|MYH9;REV__MYH9|p.I784*|1|0.07|ENSG00000100345|chr22:36304036-36304036|G/-|frameshift_variant;REV__MYH9|p.R301H|1|0.36|ENSG00000100345|chr22:36320330-36320330|C/T|missense_variant;REV__nc|ENSG00000100345|P35579-2|MYH9	19.359975847455235	1.7418937515398478	6				NaN	NaN	0	NaN	223	2208	2430
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2434	11.968	NaN	904.48	30	0	260.05	0.106				-1	EVEDVVMVNV	10	32	383.5232849121094	NaN	0	383.5232849121094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_EVEDVVM(Oxidation (M))VNV_	ENSG00000134001|ENST00000256383|EIF2S1;ENST00000556724.1_1_14:67827147-67841270:+|nuORF	21.68575002086885	0.4201028297492154	6				NaN	NaN	0	NaN	224	2208	2430
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2435	11.97	NaN	1007.9	30	0	362.25	0.106			+	-1	KRLSKMPPK	9	22	367.5583801269531	NaN	0	367.5583801269531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_KRLSKM(Oxidation (M))PPK_	REV__ENSG00000175097|ENST00000311485|RAG2;REV__RAG2|p.G509Vfs*6|1|0.18|ENSG00000175097|chr11:36592645-36592645|T/-|frameshift_variant	32.81241826257853	0.3119040447479903	6				NaN	NaN	0	NaN	225	2208	2430
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2436	11.972	NaN	174.24	30	0	27.419	0.106			+	7109	CYRFKSGLT	9	15	537.7718505859375	NaN	0	537.7718505859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_CYRFKSGLT_	REV__ENSG00000088179|ENST00000263708|PTPN4	11.511019455917149	0.3980220838287494	6				NaN	NaN	0	NaN	226	2208	2430
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2437	11.974	NaN	155.7	30	0	19.632	0.035			+	10609	EYLYPSII	8	14	499.2643737792969	NaN	0	499.2643737792969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EYLYPSII_	REV__ENSG00000019549|ENST00000020945|SNAI2	19.359975847455235	1.7418937515398478	6				NaN	NaN	0	NaN	227	2208	2430
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2455	12.01	NaN	4540.5	30	0	1805.9	0.214			+	30100	PRGKPKDK	8	47	463.2821350097656	NaN	0	463.2821350097656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PRGKPKDK_	REV__sp|Q6SW10|UL133_HCMVMProteinUL133OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL133PE=4SV=1	63.30626980617807	1.7418937515398478	6				NaN	NaN	0	NaN	242	2211	2454
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2456	12.014	NaN	333.35	30	0	52.681	0.106			+	51015	YIYRAVGRV	9	23	548.8151245117188	NaN	0	548.8151245117188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YIYRAVGRV_	REV__ENSG00000232629|ENST00000437316|HLA-DQB2;REV__nc|ENSG00000232629|P05538-2|HLA-DQB2;REV__nc|ENSG00000232629|P05538|HLA-DQB2	19.1035232394073	0.3723251548669699	6				NaN	NaN	0	NaN	243	2211	2454
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2457	12.016	NaN	256.05	30	0	50.575	0.106			+	-1	RASCTSSPK	9	19	497.24200439453125	NaN	0	497.24200439453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_RASC(Carbamidomethyl (C))TSSPK_	REV__ENSG00000277556|ENST00000374779|OR13C5;REV__OR13C5|p.T246Rfs*4|1|0.03|ENSG00000277556|chr9:104598679-104598680|-/TT|frameshift_variant	16.71738777980365	0.38040106172814914	6				NaN	NaN	0	NaN	244	2211	2454
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2458	12.018	NaN	381.08	30	0	116.94	0.033	+			31963	QQTAAKTK	8	22	438.2508850097656	NaN	0	438.2508850097656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QQTAAKTK_	ENSG00000189308|ENST00000340417|LIN54;nc|ENSG00000189308|Q6MZP7-2|LIN54;nc|ENSG00000189308|Q6MZP7-3|LIN54;nc|ENSG00000189308|Q6MZP7-4|LIN54	32.81241826257853	1.7418937515398478	6				NaN	NaN	0	NaN	245	2211	2454
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2472	12.047	NaN	478.07	30	0	83.462	0.214	+			30078	PQNHRRKQ	8	30	532.2957763671875	NaN	0	532.2957763671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PQNHRRKQ_	ENST00000595125.5_1_19:50432043-50432519:+|nuORF	28.2542754592877	1.7418937515398478	6				NaN	NaN	0	NaN	256	2214	2471
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2473	12.05	NaN	2285.1	30	0	404.75	0.034	+			41616	SVQKSSGVK	9	48	460.2642136090841	NaN	0	460.26397705078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVQKSSGVK_	CALD1|p.S665L|1|0.2|ENSG00000122786|chr7:134958223-134958223|C/T|missense_variant;ENSG00000122786|ENST00000361675|CALD1;ENST00000482470.5_1_7:134552484-134644871:+|nuORF;nc|ENSG00000122786|Q05682-2|CALD1;nc|ENSG00000122786|Q05682-3|CALD1;nc|ENSG00000122786|Q05682-4|CALD1;nc|ENSG00000122786|Q05682-5|CALD1	83.6470233535746	0.058886874190800687	6				NaN	NaN	0	NaN	257	2214	2471
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2491	12.087	NaN	5978.1	30	0	2418.1	0.214	+			14649	GTHKGAIEK	9	50	470.7641906738281	NaN	0	470.7641906738281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTHKGAIEK_	ENSG00000130340|ENST00000392185|SNX9	70.8162118820467	0.10318768208603292	6				NaN	NaN	0	NaN	272	2217	2490
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2492	12.091	NaN	2564.8	30	0	1111.3	0.106			+	8792	EEKEEKKKM	9	44	393.5410461425781	NaN	0	393.5410461425781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EEKEEKKKM_	REV__ENSG00000242732|ENST00000609883|RTL5	42.86426827375447	0.2558691296974908	6				NaN	NaN	0	NaN	273	2217	2490
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2493	12.093	NaN	1341.8	30	0	398.18	0.106	+			48767	VTVVGPQKK	9	38	478.2998352050781	NaN	0	478.2998352050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTVVGPQKK_	ENSG00000044524|ENST00000336596|EPHA3	37.15910966729921	0.2899585034171616	6				NaN	NaN	0	NaN	274	2217	2490
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2494	12.095	NaN	5699.5	30	0	717.87	0.035	+			3532	ASSRHGIQK	9	57	492.27286400680185	982.5311750804037	2	492.2731018066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASSRHGIQK_	ENSG00000135899|ENST00000258381|SP110;ENST00000490880.5_1_2:231065532-231076254:-|nuORF;nc|ENSG00000135899|Q9HB58-2|SP110;nc|ENSG00000135899|Q9HB58-3|SP110;nc|ENSG00000135899|Q9HB58-7|SP110;nc|ENSG00000135899|Q9HB58|SP110	106.88024417677582	0.032181361622142884	6				NaN	NaN	0	NaN	275	2217	2490
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2512	12.132	NaN	1186.9	30	0	215.14	0.214				-1	RMRGGRNK	8	47	495.7702941894531	NaN	0	495.7702941894531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_RM(Oxidation (M))RGGRNK_	ENSG00000116833|ENST00000367362|NR5A2;ENSG00000136931|ENST00000373588|NR5A1;nc|ENSG00000116833|O00482-2|NR5A2;nc|ENSG00000116833|O00482-3|NR5A2;nc|ENSG00000116833|O00482-4|NR5A2;NR5A1|p.V128Gfs*21|1|0.33|ENSG00000136931|chr9:124500577-124500578|-/C|frameshift_variant	50.0245360154114	1.7418937515398478	6				NaN	NaN	0	NaN	290	2220	2511
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2513	12.136	NaN	2925.8	30	0	688.82	0.106	+			44367	TSKLSHKFK	9	36	359.2120056152344	NaN	0	359.2120056152344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TSKLSHKFK_	ENSG00000158528|ENST00000433360|PPP1R9A;nc|ENSG00000158528|Q9ULJ8-4|PPP1R9A;nc|ENSG00000158528|Q9ULJ8-5|PPP1R9A;nc|ENSG00000158528|Q9ULJ8|PPP1R9A;PPP1R9A|p.T716Nfs*11|1|0.27|ENSG00000158528|chr7:95250065-95250066|-/A|frameshift_variant	37.81151784470057	0.28666463014928195	6				NaN	NaN	0	NaN	291	2220	2511
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2514	12.138	NaN	330.81	30	0	163.28	0.034	+			4313	ATGKLTKAK	9	14	459.2920837402344	NaN	0	459.2920837402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATGKLTKAK_	ENSG00000101940|ENST00000376729|WDR13;nc|ENSG00000101940|Q9H1Z4-2|WDR13;WDR13|p.R345H|2|0.72|ENSG00000101940|chrX:48602086-48602086|G/A|missense_variant	16.473147378115264	0.38122769658151995	6				NaN	NaN	0	NaN	292	2220	2511
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2532	12.175	NaN	5234	30	0	1481	0.215			+	31401	QKKKQSKK	8	48	501.8252967339377	1001.6360405346754	2	501.82440185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QKKKQSKK_	REV__ENSG00000176208|ENST00000321990|ATAD5	110.11987700582712	0.24509564897437786	6				NaN	NaN	0	NaN	307	2223	2531
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2533	12.179	NaN	3852.9	30	0	845.14	0.035	+			30510	QAFLHAQSF	9	48	524.7629216449452	1047.5112903566903	2	524.7640380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QAFLHAQSF_	ENSG00000105479|ENST00000674294|ODAD1;ENST00000474199.5_1_19:48800699-48823634:-|nuORF;ENST00000497273.1_1_19:48801255-48801556:-|nuORF;nc|ENSG00000105479|Q96M63-4|ODAD1;nc|ENSG00000105479|Q96M63-5|ODAD1;nc|ENSG00000105479|Q96M63|ODAD1	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	308	2223	2531
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2595	12.324	NaN	2196	30	0	438.59	0.143	+			5884	AVKPKAAKPK	10	39	519.3460642246494	1036.6775755160986	2	519.3455810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVKPKAAKPK_	ENSG00000168298|ENST00000304218|H1-4;ENSG00000184357|ENST00000331442|H1-5;ENSG00000187837|ENST00000343677|H1-2	58.2462437865262	0.38179041844353556	6				NaN	NaN	0	NaN	355	2238	2594
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2605	12.348	NaN	3052.1	30	0	854.93	0.143	+			1593	AGKVRGQTPK	10	50	521.3124330002968	1040.6103130673935	2	521.3121337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AGKVRGQTPK_	ENSG00000149806|ENST00000529639|FAU;ENST00000531357.1_1_11:64888296-64888581:-|nuORF	86.18897241530135	0.15289278403033058	6				NaN	NaN	0	NaN	362	2241	2604
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2617	12.376	NaN	6647.5	30	0	5575.6	0.215			+	29396	PARKGAKG	8	25	392.74351375995485	783.4724745867097	2	392.7434387207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PARKGAKG_	REV__ENSG00000079841|ENST00000521978|RIMS1;REV__nc|ENSG00000079841|Q86UR5-2|RIMS1;REV__nc|ENSG00000079841|Q86UR5-3|RIMS1;REV__nc|ENSG00000079841|Q86UR5-4|RIMS1;REV__nc|ENSG00000079841|Q86UR5-5|RIMS1;REV__nc|ENSG00000079841|Q86UR5-6|RIMS1;REV__nc|ENSG00000079841|Q86UR5-7|RIMS1;REV__nc|ENSG00000079841|Q86UR5-8|RIMS1;REV__RIMS1|p.R824*|1|0.13|ENSG00000079841|chr6:72251013-72251014|-/T|frameshift_variant	1.619023411512541	0.7811762264352071	6				NaN	NaN	0	NaN	371	2244	2616
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2618	12.379	NaN	10542	30	0	3237	0.038			+	-1	QCFICKKRA	9	45	385.2039334493501	1152.5899709482503	3	385.2038879394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_QCFIC(Carbamidomethyl (C))KKRA_	REV__ENST00000578926.1_1_7:86811567-86815316:+|nuORF	24.519189625965996	0.574102787014149	6				NaN	NaN	0	NaN	372	2244	2616
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2635	12.414	NaN	16192	30	0	1938.7	0.141				-1	 	0	51	431.78441515132675	861.5542773694535	2	431.7843017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	386	2247	2634
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2664	12.48	NaN	64461	30	0	14723	0.214	+			5394	ATYETKESKK	10	84	395.5436041252351	1183.6089829759053	3	395.5434265136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATYETKESKK_	ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65623404-65625570:-|nuORF;nc|ENSG00000165410|Q9Y281-3|CFL2	65.15724298150197	0.31893571707528906	6				NaN	NaN	0	NaN	409	2253	2663
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2665	12.484	NaN	551.31	30	0	120.8	0.036	+			19341	KAKKPAAAGVK	11	30	534.8486938476562	NaN	0	534.8486938476562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KAKKPAAAGVK_	ENSG00000184357|ENST00000331442|H1-5	41.42661286455405	0.376895999158515	6				NaN	NaN	0	NaN	410	2253	2663
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2683	12.521	NaN	5794.8	30	0	1580.1	0.214	+			32843	RCQKAMTAK	9	67	518.7733173280315	1035.5320817228628	2	518.7733764648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RCQKAMTAK_	ENSG00000126267|ENST00000649813|COX6B1	75.04331003522576	0.118981335847003	6				NaN	NaN	0	NaN	425	2256	2682
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2684	12.524	NaN	21899	30	0	6844.9	0.106	+			31248	QHKIRRPD	8	66	525.3022057438404	1048.5898585544808	2	525.3023071289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QHKIRRPD_	ENSG00000205730|ENST00000381440|ITPRIPL2;ENST00000566735.1_1_16:19125342-19127388:+|nuORF;ITPRIPL2|p.G223Afs*56|1|0.45|ENSG00000205730|chr16:19115124-19115124|G/-|frameshift_variant	51.33545320467046	0.5859736979383976	6				NaN	NaN	0	NaN	426	2256	2682
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2685	12.526	NaN	3035.4	30	0	692.94	0.106	+			21125	KKSGAQKKK	9	50	501.8252967339377	1001.6360405346754	2	501.8244323730469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KKSGAQKKK_	ENSG00000248712|ENST00000503566|CCDC153;ENST00000375140.7_1_11:119064239-119066706:-|nuORF	71.87747018426188	0.13267044672804276	6				NaN	NaN	0	NaN	427	2256	2682
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2686	12.528	NaN	715.31	30	0	305.04	0.106			+	-1	IGMLGVSLGLA	11	28	349.5364990234375	NaN	0	349.5364990234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_IGM(Oxidation (M))LGVSLGLA_	REV__ENSG00000196735|ENST00000343139|HLA-DQA1;REV__ENSG00000237541|ENST00000374940|HLA-DQA2;REV__ENST00000460633.1_1_6:32610352-32610538:+|nuORF;REV__ENST00000482745.5_1_6:32607639-32610538:+|nuORF	19.262678746197807	0.456735970842152	6				NaN	NaN	0	NaN	428	2256	2682
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2687	12.53	NaN	3435.9	30	0	1553.8	0.106			+	1675	AGSKVLQKAQ	10	41	343.8731787046376	NaN	0	343.8731689453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AGSKVLQKAQ_	REV__ENSG00000204356|ENST00000375429|NELFE;REV__ENST00000481121.5_1_6:31921790-31926696:-|nuORF;REV__ENST00000488426.5_1_6:31922795-31926316:-|nuORF;REV__ENST00000492185.5_1_6:31922795-31926696:-|nuORF;REV__nc|ENSG00000204356|P18615-3|NELFE;REV__nc|ENSG00000204356|P18615-4|NELFE	54.776311868738084	0.27540594196716844	6				NaN	NaN	0	NaN	429	2256	2682
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2688	12.532	NaN	1149.5	30	0	161.81	0.037				-1	VLCRTTLRD	9	29	378.5412902832031	NaN	0	378.5412902832031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_VLC(Carbamidomethyl (C))RTTLRD_	ENSG00000101391|ENST00000346416|CDK5RAP1;ENST00000461710.5_1_20:31946851-31946989:-|nuORF;ENST00000482967.5_1_20:31946851-31989286:-|nuORF;nc|ENSG00000101391|Q96SZ6-2|CDK5RAP1;nc|ENSG00000101391|Q96SZ6-4|CDK5RAP1;nc|ENSG00000101391|Q96SZ6|CDK5RAP1	29.14955571784316	0.3303970763161698	6				NaN	NaN	0	NaN	430	2256	2682
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2706	12.569	NaN	4365	30	0	707.71	0.214			+	28713	NNKDRSGPVS	10	69	537.2709709584356	1072.527388983671	2	537.2711791992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NNKDRSGPVS_	REV__ENSG00000277481|ENST00000620267|PKD1L3	72.87924865735499	0.25379688738724415	6				NaN	NaN	0	NaN	445	2259	2705
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2707	12.572	NaN	5840	30	0	1056.5	0.038			+	46775	VGVQHISDIAQ	11	54	389.5440368652344	NaN	0	389.5440368652344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VGVQHISDIAQ_	REV__DIP2A|p.P1075Rfs*15|1|0.35|ENSG00000160305|chr21:46554640-46554640|C/-|frameshift_variant;REV__DIP2B|p.A1021Cfs*11|1|0.32|ENSG00000066084|chr12:50721279-50721280|-/CTGTATGCAC|frameshift_variant;REV__DIP2B|p.I979Afs*17|1|0.13|ENSG00000066084|chr12:50718790-50718815|AAATAGAAGAGAATGATTTGGTGAGG/-|frameshift_variant;REV__DIP2B|p.V1240Dfs*9|1|0.05|ENSG00000066084|chr12:50731445-50731446|-/ATATTTAC|frameshift_variant;REV__DIP2C|p.H1200Lfs*7|1|0.08|ENSG00000151240|chr10:329587-329588|-/GCCCA|frameshift_variant;REV__ENSG00000066084|ENST00000301180|DIP2B;REV__ENSG00000151240|ENST00000280886|DIP2C;REV__ENSG00000160305|ENST00000417564|DIP2A;REV__nc|ENSG00000151240|Q9Y2E4-2|DIP2C;REV__nc|ENSG00000160305|Q14689-5|DIP2A;REV__nc|ENSG00000160305|Q14689-6|DIP2A	60.1669710687717	0.23124574974718506	6				NaN	NaN	0	NaN	446	2259	2705
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2725	12.609	NaN	3617.3	30	0	1045.3	0.215	+			20131	KEKMEREK	8	54	547.2877818050723	1092.5610106769445	2	547.287841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_KEKM(Oxidation (M))EREK_	ENSG00000166947|ENST00000441366|EPB42;ENST00000567019.1_1_15:43489502-43501706:-|nuORF;EPB42|p.C670Sfs*10|1|0.04|ENSG00000166947|chr15:43197369-43197370|-/TATAAAGG|frameshift_variant;EPB42|p.L487Pfs*13|1|0.39|ENSG00000166947|chr15:43206488-43206489|-/G|frameshift_variant;nc|ENSG00000166947|P16452-2|EPB42;nc|ENSG00000166947|P16452-3|EPB42	104.74654710444128	0.24806011021879068	6				NaN	NaN	0	NaN	461	2262	2724
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2726	12.613	NaN	1045.3	30	0	373.84	0.106	+			1678	AGSQARVVLF	10	22	349.8704833984375	NaN	0	349.8704833984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AGSQARVVLF_	ENST00000575350.2_2_16:3440159-3443793:-|nuORF	16.71738777980365	0.4201028297492154	6				NaN	NaN	0	NaN	462	2262	2724
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2727	12.615	NaN	436.86	30	0	166.72	0.034			+	45836	VAKLSKTAK	9	19	473.30712890625	NaN	0	473.30712890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VAKLSKTAK_	REV__tr|U7SUF4|U7SUF4_FUSNUPhosphoglyceratekinaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=pgkPE=3SV=1	10.865556482863946	0.40020666175442315	6				NaN	NaN	0	NaN	463	2262	2724
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2743	12.648	NaN	787.6	30	0	261.83	0.144	+			9304	EHYFLGISK	9	30	547.2877818050723	1092.5610106769445	2	546.8170776367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EHYFLGISK_	ENSG00000115526|ENST00000264249|CHST10	27.882242232435846	0.5426732730940306	6				NaN	NaN	0	NaN	476	2265	2742
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2761	12.686	NaN	1954.7	30	0	414.12	0.214	+			22693	KVAGAATPKK	10	53	485.8057668165524	969.5969806999049	2	485.8056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVAGAATPKK_	ENSG00000124575|ENST00000244534|H1-3	75.04331003522576	0.23611669241777622	6				NaN	NaN	0	NaN	491	2268	2760
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2762	12.69	NaN	2729	30	0	699.76	0.037	+			22942	KVQEPQGKAK	10	51	371.5526071919312	1111.6359921759936	3	371.55279541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVQEPQGKAK_	ENSG00000167397|ENST00000394975|VKORC1;ENST00000394971.7_1_16:31102457-31105584:-|nuORF;ENST00000394974.2_1_1:58694357-58694534:-|nuORF	49.536043120802724	0.461275219792494	6				NaN	NaN	0	NaN	492	2268	2760
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2778	12.723	NaN	15010	30	0	10406	0.214			+	31706	QNPIVQYGTQ	10	47	383.1961426280743	1146.566598484423	3	383.1961364746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QNPIVQYGTQ_	REV__ENSG00000048991|ENST00000683871|R3HDM1;REV__nc|ENSG00000048991|Q15032-2|R3HDM1;REV__nc|ENSG00000048991|Q15032-3|R3HDM1;REV__nc|ENSG00000048991|Q15032-4|R3HDM1;REV__nc|ENSG00000048991|Q15032|R3HDM1;REV__R3HDM1|p.A971Lfs*26|1|0.4|ENSG00000048991|chr2:135722514-135722514|A/-|frameshift_variant	32.81241826257853	0.6118718159329168	6				NaN	NaN	0	NaN	505	2271	2777
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2779	12.727	NaN	60905	30	0	11403	0.106	+			38825	SSNDKVIKK	9	89	340.20121377471645	1017.5818119243494	3	340.201416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSNDKVIKK_	ALDH3A1|p.P445Rfs*6|4|0.31|ENSG00000108602|chr17:19738336-19738336|G/-|frameshift_variant;ENSG00000108602|ENST00000225740|ALDH3A1;ENST00000479677.6_1_17:19641536-19646703:-|nuORF	60.11826168202944	0.21262886028301267	6				NaN	NaN	0	NaN	506	2271	2777
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2780	12.729	NaN	1876.3	30	0	601.13	0.106	+			19459	KARVWCSLVI	10	31	392.2288867183375	NaN	0	392.22906494140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KARVWCSLVI_	ENST00000455320.5_2_2:190445193-190446614:-|nuORF	26.063383197487333	0.4145965855542893	6				NaN	NaN	0	NaN	507	2271	2777
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2781	12.73	NaN	6063.6	30	0	1855.1	0.04	+			12129	GAGRERLLRWK	11	60	447.93314055629867	1340.777592269096	3	447.9331359863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GAGRERLLRWK_	ENST00000380009.8_1_5:94890945-94903636:+|nuORF	36.31764250033197	0.6083289427130232	6				NaN	NaN	0	NaN	508	2271	2777
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2799	12.767	NaN	4594	30	0	1473.2	0.214	+			10402	EVERKQKG	8	67	487.27483534101947	972.535117748839	2	487.2745056152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EVERKQKG_	ADD1|p.K718Rfs*11|2|0.23|ENSG00000087274|chr4:2928458-2928458|A/-|frameshift_variant;ENSG00000087274|ENST00000683351|ADD1;ENST00000513762.2_1_4:2911056-2928400:+|nuORF;nc|ENSG00000087274|P35611-2|ADD1;nc|ENSG00000087274|P35611-3|ADD1;nc|ENSG00000087274|P35611-4|ADD1;nc|ENSG00000087274|P35611-6|ADD1;nc|ENSG00000087274|P35611|ADD1	64.20726635412375	0.4601301477144759	6				NaN	NaN	0	NaN	523	2274	2798
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2800	12.77	NaN	2191.7	30	0	409.07	0.106	+			889	AEHKAKSL	8	44	442.25311279296875	NaN	0	442.25311279296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEHKAKSL_	ENSG00000148296|ENST00000372022|SURF6	69.6276240434122	1.7418937515398478	6				NaN	NaN	0	NaN	524	2274	2798
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2801	12.772	NaN	24432	30	0	6801	0.106	+			14351	GTAAKSITKK	10	70	335.5413818359375	NaN	0	335.5413818359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTAAKSITKK_	ENSG00000133574|ENST00000255945|GIMAP4	99.78786539795823	0.016847423979894027	6				NaN	NaN	0	NaN	525	2274	2798
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2802	12.774	NaN	2606.7	30	0	595.25	0.106				-1	EWLSPIQK	8	41	348.1889953613281	NaN	0	348.1889953613281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))EWLSPIQK_	ENSG00000198046|ENST00000504904|ZNF667;ZNF667|p.I246Nfs*27|1|0.32|ENSG00000198046|chr19:56442258-56442259|-/T|frameshift_variant;ZNF667|p.N263Rfs*52|1|0.28|ENSG00000198046|chr19:56442204-56442207|TGAT/-|frameshift_variant;ZNF667|p.Y39C|1|0.38|ENSG00000198046|chr19:56460733-56460733|T/C|missense_variant	31.954861631926434	1.7418937515398478	6				NaN	NaN	0	NaN	526	2274	2798
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2803	12.776	NaN	16403	30	0	3167.8	0.106	+			40784	SVDPRRRNK	9	45	376.55127563269826	1126.6319974982948	3	376.551025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVDPRRRNK_	ENSG00000167526|ENST00000311528|RPL13;ENST00000399461.8_1_16:89627605-89629447:+|nuORF;ENST00000484610.5_1_16:89627907-89629447:+|nuORF;ENST00000563749.1_1_16:89627907-89628201:+|nuORF;ENST00000565571.5_1_16:89627367-89628201:+|nuORF	36.446750945000026	0.4619375763483977	6				NaN	NaN	0	NaN	527	2274	2798
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2804	12.778	NaN	511.78	30	0	157.91	0.035	+			31427	QKNQRTKK	8	21	515.8095703125	NaN	0	515.8095703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QKNQRTKK_	ENSG00000100578|ENST00000652326|KIAA0586;ENST00000538571.6_1_14:58909433-59003756:+|nuORF;KIAA0586|p.K791Rfs*14|1|0.33|ENSG00000100578|chr14:58467891-58467891|A/-|frameshift_variant;KIAA0586|p.P1497Lfs*6|1|0.11|ENSG00000100578|chr14:58547816-58547816|C/-|frameshift_variant;KIAA0586|p.S722Qfs*8|1|0.39|ENSG00000100578|chr14:58465980-58465980|T/-|frameshift_variant;nc|ENSG00000100578|Q9BVV6-3|KIAA0586;nc|ENSG00000100578|Q9BVV6-4|KIAA0586;nc|ENSG00000100578|Q9BVV6|KIAA0586	18.324413293986947	1.7418937515398478	6				NaN	NaN	0	NaN	528	2274	2798
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2805	12.778	NaN	278.44	30	0	116.47	0.143	+			38707	SSLAFLNLT	9	8	322.5135803222656	NaN	0	322.5135803222656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSLAFLNLT_	ENSG00000136869|ENST00000355622|TLR4;nc|ENSG00000136869|O00206-2|TLR4;nc|ENSG00000136869|O00206-3|TLR4	8.693696342081763	0.40727630907727536	6				NaN	NaN	0	NaN	529	2274	2798
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2823	12.817	NaN	1115.8	30	0	254.66	0.214	+			15203	GTSSKQVVK	9	43	467.2713928222656	NaN	0	467.2713928222656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTSSKQVVK_	ENSG00000125484|ENST00000372146|GTF3C4	35.15202426646627	0.3000918603816441	6				NaN	NaN	0	NaN	544	2277	2822
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2824	12.82	NaN	1718.4	30	0	241.65	0.106	+			46968	VKKKIQSLQQ	10	54	600.3771918850858	NaN	0	600.376953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VKKKIQSLQQ_	nc|ENSG00000198467|P07951-3|TPM2	58.22992032128504	0.24873293749302264	6				NaN	NaN	0	NaN	545	2277	2822
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2825	12.822	NaN	1703.8	30	0	522.75	0.106	+			1713	AGVRRLKVSSK	11	35	400.92181396484375	NaN	0	400.92181396484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AGVRRLKVSSK_	ENSG00000158258|ENST00000458420|CLSTN2;ENST00000511524.1_1_3:139654198-140275504:+|nuORF	13.507942900623993	0.456735970842152	6				NaN	NaN	0	NaN	546	2277	2822
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2826	12.824	NaN	271.8	30	0	51.729	0.106			+	45968	VASVLSRLIQ	10	19	543.3378295898438	NaN	0	543.3378295898438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VASVLSRLIQ_	REV__ENSG00000162302|ENST00000334205|RPS6KA4;REV__nc|ENSG00000162302|O75676-2|RPS6KA4	14.137123925751023	0.4201028297492154	6				NaN	NaN	0	NaN	547	2277	2822
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2827	12.826	NaN	126.44	30	0	36.123	0.106	+			22618	KTTSKKPK	8	9	459.292236328125	NaN	0	459.292236328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KTTSKKPK_	ENSG00000077097|ENST00000264331|TOP2B;nc|ENSG00000077097|Q02880-2|TOP2B	3.9852391341785527	1.7418937515398478	6				NaN	NaN	0	NaN	548	2277	2822
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2828	12.828	NaN	1439.7	30	0	573.4	0.037				-1	KTATAVAHCK	10	30	362.86273193359375	NaN	0	362.86273193359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_KTATAVAHC(Carbamidomethyl (C))K_	chr19:39435705-39435848|468|276.17|0.0|24.72|-|0|RPS16,RPS16|1;ENSG00000105193|ENST00000251453|RPS16;ENST00000601390.1_1_19:39926180-39926535:-|nuORF	25.125986553469783	0.41767453237088564	6				NaN	NaN	0	NaN	549	2277	2822
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2846	12.865	NaN	11640	30	0	1145.2	0.214				-1	 	0	67	495.7702008043744	989.5258486755488	2	495.76983642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	564	2280	2845
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2847	12.869	NaN	410.48	30	0	54.437	0.106			+	30626	QASKVRTG	8	30	423.74139404296875	NaN	0	423.74139404296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QASKVRTG_	REV__ENSG00000164818|ENST00000297440|DNAAF5;REV__nc|ENSG00000164818|Q86Y56-2|DNAAF5	29.14955571784316	1.7418937515398478	6				NaN	NaN	0	NaN	565	2280	2845
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2848	12.871	NaN	798.54	30	0	109.99	0.106	+			23104	KVVKLHTKL	9	34	533.3611511596481	1064.707749386096	2	533.3623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KVVKLHTKL_	ENSG00000056097|ENST00000265069|ZFR	33.921630207806714	0.48623198279849766	6				NaN	NaN	0	NaN	566	2280	2845
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2849	12.873	NaN	2266.6	30	0	784.65	0.106	+			22006	KSGACNLAHK	10	49	514.7678125348909	1027.5210721365818	2	514.7677001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KSGACNLAHK_	ENSG00000121361|ENST00000240662|KCNJ8;KCNJ8|p.T122*|3|0.35|ENSG00000121361|chr12:21773253-21773254|-/CA|frameshift_variant	56.43379154798735	0.3982744522255666	6				NaN	NaN	0	NaN	567	2280	2845
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2850	12.875	NaN	8089.7	30	0	2242.5	0.039			+	30070	PQLAAAEQYIQ	11	57	411.21514409521853	1230.6236028858557	3	411.21466064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PQLAAAEQYIQ_	REV__ENSG00000133687|ENST00000539277|TMTC1;REV__nc|ENSG00000133687|Q8IUR5-1|TMTC1;REV__nc|ENSG00000133687|Q8IUR5-2|TMTC1;REV__nc|ENSG00000133687|Q8IUR5-4|TMTC1;REV__TMTC1|p.E735Kfs*5|1|0.3|ENSG00000133687|chr12:29516454-29516454|T/-|frameshift_variant	36.31764250033197	0.6083289427130232	6				NaN	NaN	0	NaN	568	2280	2845
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2868	12.912	NaN	1899	30	0	444.14	0.214	+			22007	KSGAQKKKK	9	40	501.8252967339377	1001.6360405346754	2	501.8243103027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSGAQKKKK_	CCDC153|p.K10N|1|0.43|ENSG00000248712|chr11:119195458-119195458|C/A|missense_variant;ENSG00000248712|ENST00000503566|CCDC153;ENST00000375140.7_1_11:119064239-119066706:-|nuORF	41.42661286455405	0.403525789677298	6				NaN	NaN	0	NaN	583	2283	2867
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2869	12.916	NaN	2116.7	30	0	615.5	0.106	+			38534	SSDPKSSHLK	10	52	543.282920520422	1084.5512881076438	2	543.2830200195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSDPKSSHLK_	ENSG00000171992|ENST00000307662|SYNPO;nc|ENSG00000171992|Q8N3V7-3|SYNPO;nc|ENSG00000171992|Q8N3V7|SYNPO;SYNPO|p.E657Rfs*2|1|0.5|ENSG00000171992|chr5:150649508-150649508|G/-|frameshift_variant;SYNPO|p.V892Cfs*70|1|0.42|ENSG00000171992|chr5:150650212-150650212|C/-|frameshift_variant	81.52500206392136	0.18316182710238588	6				NaN	NaN	0	NaN	584	2283	2867
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2870	12.918	NaN	745.75	30	0	107.83	0.106			+	24947	LLAAKQKAQ	9	37	485.8057668165524	969.5969806999049	2	486.2536315917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LLAAKQKAQ_	REV__ENSG00000161904|ENST00000293760|LEMD2;REV__ENST00000514636.1_1_6:33747875-33752267:-|nuORF	23.04248740728303	0.5879033540491928	6				NaN	NaN	0	NaN	585	2283	2867
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2871	12.92	NaN	738.85	30	0	189.87	0.035	+			34133	RSTLNGVLKG	10	38	522.8126154635266	1043.6106779938532	2	522.8120727539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RSTLNGVLKG_	DSCAML1|p.P1274Lfs*7|2|0.3|ENSG00000177103|chr11:117450616-117450616|G/-|frameshift_variant;DSCAML1|p.P2046Qfs*45|1|0.5|ENSG00000177103|chr11:117428533-117428533|G/-|frameshift_variant;DSCAML1|p.S2067Afs*24|1|0.48|ENSG00000177103|chr11:117428472-117428472|G/-|frameshift_variant;ENSG00000177103|ENST00000651296|DSCAML1;nc|ENSG00000177103|Q8TD84-2|DSCAML1	35.15202426646627	0.5927656479315102	6				NaN	NaN	0	NaN	586	2283	2867
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2889	12.957	NaN	951.78	30	0	199.92	0.214	+			30771	QDRQLRLL	8	34	521.3117065429688	NaN	0	521.3117065429688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QDRQLRLL_	ENSG00000123473|ENST00000371877|STIL;nc|ENSG00000123473|Q15468|STIL	40.77816245573522	1.7418937515398478	6				NaN	NaN	0	NaN	601	2286	2888
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2890	12.961	NaN	844.99	30	0	162.7	0.106			+	1456	AFELEAKKL	9	34	524.8035278320312	NaN	0	524.8035278320312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AFELEAKKL_	REV__nc|ENSG00000168675|O15165-6|LDLRAD4;REV__nc|ENSG00000168675|O15165-7|LDLRAD4	34.172542307311794	0.30503706118289736	6				NaN	NaN	0	NaN	602	2286	2888
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2891	12.963	NaN	443.14	30	0	97.084	0.106	+			26737	LVLRTTST	8	17	445.7684631347656	NaN	0	445.7684631347656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LVLRTTST_	ENSG00000002726|ENST00000360937|AOC1;nc|ENSG00000002726|P19801-2|AOC1	8.822329726475273	1.7418937515398478	6				NaN	NaN	0	NaN	603	2286	2888
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2892	12.965	NaN	198.15	30	0	57.087	0.106			+	-1	HACMVENC	8	14	482.1778564453125	NaN	0	482.1778564453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_HAC(Carbamidomethyl (C))MVENC_	REV__ENST00000399247.6_1_6:29694759-29696203:-|nuORF	8.822329726475273	1.7418937515398478	6				NaN	NaN	0	NaN	604	2286	2888
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2893	12.966	NaN	1240.7	30	0	149.24	0.106			+	1468	AFHVCSQE	8	46	460.7018358344193	NaN	0	460.70159912109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AFHVCSQE_	REV__ENSG00000182752|ENST00000328252|PAPPA;REV__PAPPA|p.L1488Qfs*6|1|0.82|ENSG00000182752|chr9:116362706-116362707|CT/-|frameshift_variant	53.351449002276354	1.7418937515398478	6				NaN	NaN	0	NaN	605	2286	2888
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2894	12.968	NaN	1250.3	30	0	630.32	0.037			+	9180	EGPVQSITVTL	11	16	381.8789367675781	NaN	0	381.8789367675781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EGPVQSITVTL_	REV__ENSG00000188549|ENST00000397536|CCDC9B;REV__nc|ENSG00000188549|Q6ZUT6|CCDC9B	19.262678746197807	0.456735970842152	6				NaN	NaN	0	NaN	606	2286	2888
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2912	13.004	NaN	2188.8	30	0	248.21	0.214	+			44812	TTSAKTTMK	9	54	484.75811767578125	NaN	0	484.75811767578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTSAKTTMK_	ENSG00000176945|ENST00000447234|MUC20;nc|ENSG00000176945|Q8N307-3|MUC20	85.16082228582465	0.053699699744190164	6				NaN	NaN	0	NaN	621	2289	2911
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2913	13.008	NaN	914.26	30	0	189.48	0.034	+			21944	KSAEKALGK	9	45	466.2823791503906	NaN	0	466.2823791503906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KSAEKALGK_	ENSG00000022277|ENST00000357348|RTF2	51.19269402634007	0.19847346126499396	6				NaN	NaN	0	NaN	622	2289	2911
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2931	13.045	NaN	43030	30	0	7872.4	0.214	+			38700	SSKLNSVATA	10	70	326.5135729171559	976.5188893516677	3	326.51348876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSKLNSVATA_	ZNF703|p.A115T|1|0.54|ENSG00000183779|chr8:37697244-37697244|G/A|missense_variant	56.72105179125745	0.3956618550748046	6				NaN	NaN	0	NaN	637	2292	2930
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2932	13.049	NaN	970.33	30	0	352.98	0.106				-1	FMRILSGP	8	35	468.753173828125	NaN	0	468.753173828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_FM(Oxidation (M))RILSGP_	ENSG00000159131|ENST00000381815|GART;ENST00000424203.5_1_21:34876433-34900844:-|nuORF	35.200714571348534	1.7418937515398478	6				NaN	NaN	0	NaN	638	2292	2930
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2933	13.051	NaN	3126	30	0	2052.9	0.106	+			21842	KRGVGKDKHK	10	31	384.90372051305445	1151.6893321393634	3	385.2377624511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KRGVGKDKHK_	ENSG00000187510|ENST00000344636|PLEKHG7	20.030474535948922	0.7146664069068879	6				NaN	NaN	0	NaN	639	2292	2930
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2934	13.052	NaN	493.46	30	0	81.798	0.036			+	34712	RVVIESLQK	9	30	536.329801792785	NaN	0	536.3294677734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RVVIESLQK_	REV__ENSG00000137494|ENST00000533342|ANKRD42;REV__nc|ENSG00000137494|Q8N9B4-2|ANKRD42	27.882242232435846	0.3367954786602879	6				NaN	NaN	0	NaN	640	2292	2930
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2952	13.09	NaN	24831	30	0	3656.5	0.214	+			34343	RTQAAAVQK	9	75	486.78296930547697	971.551385677754	2	486.78271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTQAAAVQK_	ARHGAP28|p.F355Lfs*8|2|0.4|ENSG00000088756|chr18:6873514-6873514|T/-|frameshift_variant;ARHGAP28|p.G328Wfs*4|1|0.21|ENSG00000088756|chr18:6873432-6873433|-/T|frameshift_variant;ARHGAP28|p.R364Gfs*7|1|0.08|ENSG00000088756|chr18:6873541-6873541|A/-|frameshift_variant;ENSG00000088756|ENST00000383472|ARHGAP28;ENSG00000146376|ENST00000368149|ARHGAP18;nc|ENSG00000088756|Q9P2N2-2|ARHGAP28;nc|ENSG00000146376|Q8N392-2|ARHGAP18	128.60217544463768	0.015992218256422188	6				NaN	NaN	0	NaN	655	2295	2951
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2953	13.094	NaN	4565.5	30	0	521.29	0.106			+	17212	HVGRKTAEI	9	66	505.79070327792334	NaN	0	505.79071044921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HVGRKTAEI_	REV__tr|U7SXH2|U7SXH2_FUSNUAlanineracemaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00954PE=3SV=1	79.71258880314673	0.07236858429579222	6				NaN	NaN	0	NaN	656	2295	2951
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2954	13.096	NaN	1430.8	30	0	363.16	0.106	+			9756	ENHKIRIE	8	49	519.7883509656326	1037.5621489980651	2	519.7883911132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ENHKIRIE_	ENST00000534479.5_1_11:12023699-12030797:-|nuORF	44.377184641726394	0.6291511924298419	6				NaN	NaN	0	NaN	657	2295	2951
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2955	13.097	NaN	1809.1	30	0	478.66	0.106	+			6099	AVNKQLHQK	9	44	355.8768913859766	NaN	0	355.8769226074219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVNKQLHQK_	ENSG00000128944|ENST00000249776|KNSTRN;ENST00000560220.5_1_15:40676698-40685795:+|nuORF;nc|ENSG00000128944|Q9Y448-2|KNSTRN;nc|ENSG00000128944|Q9Y448-3|KNSTRN	45.97224482568171	0.23445038899310136	6				NaN	NaN	0	NaN	658	2295	2951
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2956	13.099	NaN	1058.1	30	0	273.29	0.106				-1	 	0	44	503.2827203225077	502.2754438559077	1	503.2823791503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	659	2295	2951
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2957	13.101	NaN	1289.9	30	0	483.15	0.036	+			10015	ERRPRGLQ	8	35	337.8641357421875	NaN	0	337.8641357421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ERRPRGLQ_	ENST00000316286.13_1_7:148768550-148768973:-|nuORF	27.882242232435846	1.7418937515398478	6				NaN	NaN	0	NaN	660	2295	2951
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2975	13.138	NaN	181440	30	0	132570	0.214	+			4855	ATPKKTVPK	9	61	485.3080219612465	968.601490989293	2	485.3079528808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATPKKTVPK_	ENSG00000166197|ENST00000605788|NOLC1;nc|ENSG00000166197|Q14978-3|NOLC1	158.07458414430337	0.004987072822166904	6				NaN	NaN	0	NaN	675	2298	2974
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2976	13.141	NaN	7896.2	30	0	998.93	0.106	+			32974	REDSQRPGA	9	65	508.24953240305	1014.4845118729	2	508.2495422363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_REDSQRPGA_	chr12:54282662-54282800|482|460.96|0.0|25.46|+|ENST00000677249|HNRNPA1,HNRNPA1;ENSG00000135486|ENST00000340913|HNRNPA1;ENSG00000139675|ENST00000357495|HNRNPA1L2;ENST00000391992.3_1_12:9180728-9181528:-|nuORF;ENST00000422644.2_1_X:73693403-73693721:-|nuORF;ENST00000444886.1_1_9:128358162-128358726:+|nuORF;ENST00000457695.2_1_X:100110922-100111255:-|nuORF;ENST00000458678.1_1_1:241083162-241083366:+|nuORF;ENST00000510646.1_1_5:135764749-135765112:+|nuORF;ENST00000546565.1_1_12:93277549-93277891:+|nuORF;nc|ENSG00000135486|P09651-2|HNRNPA1;nc|ENSG00000135486|P09651-3|HNRNPA1	90.60085204095205	0.06317133949006545	6				NaN	NaN	0	NaN	676	2298	2974
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2977	13.143	NaN	38708	30	0	19045	0.106	+			15337	GTVKPNANR	9	66	478.7673975602056	955.5202421872112	2	478.7670593261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTVKPNANR_	ENSG00000131981|ENST00000254301|LGALS3;ENST00000556263.1_1_14:55605083-55607082:+|nuORF;ENST00000556438.6_1_14:55604729-55611986:+|nuORF	153.03582135801034	0.006161527642367307	6				NaN	NaN	0	NaN	677	2298	2974
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2978	13.145	NaN	5126.6	30	0	977.95	0.106	+			40785	SVDPRRRNK	9	36	376.55127563269826	1126.6319974982948	3	376.5512390136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVDPRRRNK_	ENSG00000167526|ENST00000311528|RPL13;ENST00000399461.8_1_16:89627605-89629447:+|nuORF;ENST00000484610.5_1_16:89627907-89629447:+|nuORF;ENST00000563749.1_1_16:89627907-89628201:+|nuORF;ENST00000565571.5_1_16:89627367-89628201:+|nuORF	26.69291269510374	0.5537881896960711	6				NaN	NaN	0	NaN	678	2298	2974
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2979	13.147	NaN	572.18	30	0	86.696	0.106	+			22156	KSRPLKSQ	8	37	472.2872365140548	NaN	0	472.2873840332031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KSRPLKSQ_	CYLC1|p.D425Gfs*2|1|0.26|ENSG00000183035|chrX:83873972-83873973|-/A|frameshift_variant;CYLC1|p.K424Rfs*69|2|0.17|ENSG00000183035|chrX:83873973-83873973|A/-|frameshift_variant;CYLC1|p.N205Ffs*7|1|0.15|ENSG00000183035|chrX:83873321-83873322|AA/-|frameshift_variant;CYLC1|p.N291Efs*7|1|0.24|ENSG00000183035|chrX:83873571-83873572|-/A|frameshift_variant;ENSG00000183035|ENST00000329312|CYLC1	19.1035232394073	1.7418937515398478	6				NaN	NaN	0	NaN	679	2298	2974
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2980	13.149	NaN	628.73	30	0	326.54	0.037			+	2504	APTEAQIWII	10	20	381.2118225097656	NaN	0	381.2118225097656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_APTEAQIWII_	REV__IGSF1|p.F134I|1|0.11|ENSG00000147255|chrX:131285446-131285446|A/T|missense_variant	16.006774744331256	0.4201028297492154	6				NaN	NaN	0	NaN	680	2298	2974
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2999	13.186	NaN	28238	30	0	4335.8	0.214	+			32800	RATKPTVQK	9	82	514.8138490512433	1027.6131451692866	2	514.814208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RATKPTVQK_	ENST00000263196.11_1_22:19055732-19076988:-|nuORF	79.48907831485694	0.09975780661107167	6				NaN	NaN	0	NaN	696	2301	2998
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3000	13.19	NaN	6953.4	30	0	2723.6	0.106	+			21720	KQKKPLVGK	9	53	342.56569149244046	NaN	0	342.5657043457031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KQKKPLVGK_	ENSG00000174444|ENST00000307961|RPL4;ENST00000422486.1_1_3:185135285-185135612:-|nuORF;ENST00000567229.5_1_15:66791747-66793486:-|nuORF	34.172542307311794	0.30503706118289736	6				NaN	NaN	0	NaN	697	2301	2998
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3001	13.192	NaN	1894	30	0	1168.8	0.106			+	19663	KDLRYLLA	8	32	496.298891626542	NaN	0	496.2989501953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KDLRYLLA_	REV__ENSG00000106714|ENST00000297668|CNTNAP3;REV__ENSG00000283378|ENST00000636699|CNTNAP3C;REV__ENST00000377653.2_1_9:39174468-39266986:-|nuORF;REV__nc|ENSG00000283378|Q9BZ76-2|CNTNAP3	18.324413293986947	1.7418937515398478	6				NaN	NaN	0	NaN	698	2301	2998
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3002	13.193	NaN	4181.2	30	0	978.31	0.106			+	2901	ASATTTRH	8	40	422.7169635542634	843.4193741753268	2	422.7169189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASATTTRH_	REV__ENST00000590628.1_1_19:28296677-28296926:+|nuORF	33.51558372728122	0.7005509609380386	6				NaN	NaN	0	NaN	699	2301	2998
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3003	13.195	NaN	528.23	30	0	184.32	0.106	+			19685	KDPRLPIL	8	22	476.3013916015625	NaN	0	476.3013916015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KDPRLPIL_	ENSG00000144130|ENST00000688554|NT5DC4;nc|ENSG00000144130|Q86YG4|NT5DC4	20.481830146152948	1.741893751539848	6				NaN	NaN	0	NaN	700	2301	2998
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3004	13.197	NaN	2556.2	30	0	461.29	0.106	+			39607	STHHTDGLSK	10	51	541.7646488873395	1081.514744841479	2	541.7649536132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STHHTDGLSK_	ENSG00000112701|ENST00000447266|SENP6;nc|ENSG00000112701|Q9GZR1-2|SENP6;SENP6|p.G1004Efs*11|4|0.34|ENSG00000112701|chr6:75713700-75713700|A/-|frameshift_variant	96.0336014099291	0.09653029772959643	6				NaN	NaN	0	NaN	701	2301	2998
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3005	13.199	NaN	1869.9	30	0	473.04	0.034	+			19477	KASSSLPKK	9	54	473.28994872811194	944.5653445230239	2	473.2895202636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KASSSLPKK_	ENSG00000104979|ENST00000588234|C19orf53;ENST00000588858.5_1_19:13886394-13889009:+|nuORF	61.691277971877994	0.19951612995419254	6				NaN	NaN	0	NaN	702	2301	2998
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3023	13.236	NaN	1946	30	0	286.52	0.214	+			36376	SETGAGKHV	9	48	443.2248166104561	884.4350802877123	2	443.2246398925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SETGAGKHV_	ENSG00000075886|ENST00000321253|TUBA3D;ENSG00000123416|ENST00000336023|TUBA1B;ENSG00000152086|ENST00000312988|TUBA3E;ENSG00000167552|ENST00000301071|TUBA1A;ENSG00000167553|ENST00000301072|TUBA1C;ENSG00000198033|ENST00000400113|TUBA3C;ENST00000530835.1_1_11:90015825-90016947:+|nuORF;ENST00000548363.1_1_12:49580068-49582762:-|nuORF;ENST00000550254.1_1_12:49580073-49582762:-|nuORF;ENST00000551324.5_1_12:49523262-49525083:-|nuORF;nc|ENSG00000123416|P68363-2|TUBA1B;nc|ENSG00000167552|Q71U36-2|TUBA1A;nc|ENSG00000198033|P0DPH7-2|TUBA3C;TUBA3C|p.G144Afs*24|1|0.32|ENSG00000198033|chr13:19177554-19177554|A/-|frameshift_variant;TUBA3C|p.T361Rfs*18|1|0.17|ENSG00000198033|chr13:19174136-19174136|G/-|frameshift_variant;TUBA3D|p.G366Efs*13|1|0.17|ENSG00000075886|chr2:131482588-131482588|G/-|frameshift_variant;TUBA3D|p.V328Pfs*54|1|0.45|ENSG00000075886|chr2:131480665-131480666|-/CCCAAAGA|frameshift_variant;TUBA3E|p.Q176Rfs*14|1|0.58|ENSG00000152086|chr2:130194316-130194316|G/-|frameshift_variant	74.25504064058377	0.12238981753128622	6				NaN	NaN	0	NaN	717	2304	3022
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3024	13.24	NaN	6922	30	0	2852.9	0.106	+			6254	AVSKEVTRK	9	46	339.8731951366815	1016.5977560102444	3	339.8731689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVSKEVTRK_	ENSG00000114850|ENST00000265044|SSR3;ENST00000467733.1_1_3:156262080-156272878:-|nuORF;ENST00000498205.5_1_3:156260994-156266845:-|nuORF;nc|ENSG00000114850|Q9UNL2-2|SSR3	44.377184641726394	0.36891676396732553	6				NaN	NaN	0	NaN	718	2304	3022
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3025	13.242	NaN	1058.6	30	0	179.53	0.106			+	19690	KDQSATLFR	9	47	533.2884704978368	1064.5623880624735	2	533.2882080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KDQSATLFR_	REV__ENSG00000168404|ENST00000308807|MLKL;REV__nc|ENSG00000168404|Q8NB16-2|MLKL	46.45678178249821	0.34452392205506005	6				NaN	NaN	0	NaN	719	2304	3022
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3026	13.244	NaN	1002.6	30	0	254.15	0.106			+	18076	IKGKESKPAK	10	42	543.3381958007812	NaN	0	543.3381958007812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IKGKESKPAK_	REV__chr10:128113602-128116491|398|11.56|0.71|4.03|-|ENST00000368653|MKI67,MKI67;REV__ENSG00000148773|ENST00000368654|MKI67;REV__MKI67|p.L2374*|1|0.28|ENSG00000148773|chr10:128104719-128104719|A/-|frameshift_variant;REV__MKI67|p.R3036Yfs*27|1|0.04|ENSG00000148773|chr10:128102735-128102736|-/AAAATAA|frameshift_variant;REV__nc|ENSG00000148773|P46013-2|MKI67	25.57405402267927	0.4162033004763879	6				NaN	NaN	0	NaN	720	2304	3022
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3027	13.246	NaN	645.64	30	0	173.29	0.106			+	-1	SGGRRLFCG	9	27	505.25274658203125	NaN	0	505.25274658203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_SGGRRLFC(Carbamidomethyl (C))G_	REV__ENST00000571669.6_1_17:2322656-2322995:-|nuORF	17.364965105453717	0.37820932774828947	6				NaN	NaN	0	NaN	721	2304	3022
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3028	13.247	NaN	1888.1	30	0	252.79	0.035			+	11128	FFWGPTSGV	9	41	499.243939765433	996.4733265976661	2	499.2427673339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FFWGPTSGV_	REV__ENST00000368761.9_1_6:111880407-111880587:-|nuORF	19.359975847455235	0.6112419832031293	6				NaN	NaN	0	NaN	722	2304	3022
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3046	13.284	NaN	2259.6	30	0	283.16	0.214	+			20133	KEKNEKGAL	9	57	508.7901316518354	1015.5657103704708	2	508.79010009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEKNEKGAL_	ENSG00000143321|ENST00000357325|HDGF;ENST00000465180.5_1_1:156713243-156725382:-|nuORF;ENST00000477306.1_1_1:156713442-156714029:-|nuORF;ENST00000482651.5_1_1:156713243-156717241:-|nuORF;nc|ENSG00000143321|P51858-2|HDGF;nc|ENSG00000143321|P51858-3|HDGF	81.52500206392136	0.09095445986635249	6				NaN	NaN	0	NaN	737	2307	3045
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3047	13.288	NaN	1225.6	30	0	396.35	0.106	+			21868	KRLTKTQK	8	28	501.8252967339377	1001.6360405346754	2	501.8238830566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KRLTKTQK_	ENST00000360003.7_1_10:121618406-121618611:-|nuORF	30.503639358989545	0.7238069182250283	6				NaN	NaN	0	NaN	738	2307	3045
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3048	13.29	NaN	1055.8	30	0	235.54	0.106	+			11126	FFVRGSRPT	9	38	533.7921142578125	NaN	0	533.7921142578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FFVRGSRPT_	ENST00000263776.8_1_11:44087965-44089254:+|nuORF	18.262085536374414	0.37517301184500873	6				NaN	NaN	0	NaN	739	2307	3045
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3049	13.292	NaN	3973.5	30	0	424.08	0.106	+			34159	RTAHNAIEK	9	60	520.2859040618487	1038.5572551904972	2	520.2858276367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RTAHNAIEK_	ENSG00000072310|ENST00000261646|SREBF1;ENST00000470247.1_1_17:17721556-17722545:-|nuORF;nc|ENSG00000072310|P36956-2|SREBF1;nc|ENSG00000072310|P36956-3|SREBF1;nc|ENSG00000072310|P36956-4|SREBF1;nc|ENSG00000072310|P36956-5|SREBF1;nc|ENSG00000072310|P36956-6|SREBF1	63.69406221917213	0.18282083575345315	6				NaN	NaN	0	NaN	740	2307	3045
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3050	13.294	NaN	1951.8	30	0	471.02	0.106			+	19433	KAQAERDLPDA	11	30	405.208984375	NaN	0	405.208984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KAQAERDLPDA_	REV__ENSG00000170967|ENST00000302259|DDI1	19.262678746197807	0.456735970842152	6				NaN	NaN	0	NaN	741	2307	3045
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3051	13.295	NaN	372.07	30	0	51.767	0.036				-1	KACLDCICR	9	29	541.2501831054688	NaN	0	541.2501831054688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_KACLDCIC(Carbamidomethyl (C))R_	ENSG00000174579|ENST00000309993|MSL2;MSL2|p.L557*|1|0.09|ENSG00000174579|chr3:136151211-136151211|A/-|frameshift_variant;nc|ENSG00000174579|Q9HCI7-2|MSL2	14.864876125193954	0.3866709117995958	6				NaN	NaN	0	NaN	742	2307	3045
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3069	13.333	NaN	7115.4	30	0	1979.9	0.214			+	32531	QVRCSVKH	8	67	507.2693391069844	1012.5241252807688	2	507.2691955566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_QVRC(Carbamidomethyl (C))SVKH_	REV__ENST00000464316.5_1_3:156870794-156871031:-|nuORF;REV__ENST00000467081.1_1_3:156870794-156876755:-|nuORF	79.45101966838831	0.3281480470254892	6				NaN	NaN	0	NaN	757	2310	3068
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3070	13.336	NaN	3196.8	30	0	1053.3	0.106			+	33947	RSASGLLLGLL	11	59	550.3454090187138	1098.6762651042275	2	550.3458251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RSASGLLLGLL_	REV__ENSG00000161682|ENST00000293443|FAM171A2;REV__ENST00000592560.1_1_17:42436899-42441082:-|nuORF	51.19269402634007	0.4047928213175833	6				NaN	NaN	0	NaN	758	2310	3068
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3071	13.338	NaN	659.25	30	0	335.28	0.034				-1	MQRSPPRS	8	28	487.7451422729868	NaN	0	487.7451171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))QRSPPRS_	ENST00000564460.2_1_16:952344-953654:-|nuORF;ENST00000564460.2_1_16:952537-955195:-|nuORF	19.996771675451527	1.7418937515398478	6				NaN	NaN	0	NaN	759	2310	3068
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3089	13.376	NaN	6895.7	30	0	691.04	0.215	+			2573	AQDKSVVNK	9	71	494.77624304548397	987.537933157768	2	494.7744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AQDKSVVNK_	ENSG00000003147|ENST00000402384|ICA1;ICA1|p.E307Lfs*26|1|0.05|ENSG00000003147|chr7:8141801-8141802|-/TTTTTCAA|frameshift_variant;ICA1|p.N204Tfs*5|2|0.36|ENSG00000003147|chr7:8158621-8158621|T/-|frameshift_variant;nc|ENSG00000003147|Q05084-2|ICA1;nc|ENSG00000003147|Q05084-3|ICA1	159.27591364854348	0.004707062175358555	6				NaN	NaN	0	NaN	774	2313	3088
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3090	13.38	NaN	2872.1	30	0	921.8	0.106	+			44468	TSQARGVGLE	10	48	509.27008224928466	1016.5256115653693	2	509.26953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TSQARGVGLE_	ENSG00000164850|ENST00000397088|GPER1	54.776311868738084	0.41334902933431344	6				NaN	NaN	0	NaN	775	2313	3088
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3091	13.382	NaN	6604.1	30	0	2561.2	0.106	+			39390	STDNKPYKCS	10	51	400.51782655469674	NaN	0	400.5178527832031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_STDNKPYKC(Carbamidomethyl (C))S_	ZFHX4|p.N1587S|1|0.13|ENSG00000091656|chr8:76851681-76851681|A/G|missense_variant	40.05817265558897	0.3684561582319974	6				NaN	NaN	0	NaN	776	2313	3088
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3092	13.384	NaN	4603.2	30	0	1364.4	0.038			+	-1	ATNKFDQSCN	10	44	395.505859375	NaN	0	395.505859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_ATNKFDQSC(Carbamidomethyl (C))N_	REV__RNF17|p.K116N|1|0.24|ENSG00000132972|chr13:24778325-24778325|G/T|missense_variant	32.75053402867276	0.3926392905881664	6				NaN	NaN	0	NaN	777	2313	3088
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3110	13.42	NaN	8400.3	30	0	1372	0.214	+			40047	STNKISTAK	9	66	475.26996779700715	948.5253826608143	2	475.26959228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STNKISTAK_	ENSG00000137033|ENST00000682010|IL33;ENST00000463336.1_1_9:6241694-6242202:+|nuORF;nc|ENSG00000137033|O95760-2|IL33;nc|ENSG00000137033|O95760-3|IL33;nc|ENSG00000137033|O95760-4|IL33	117.5257442709337	0.022697614825424036	6				NaN	NaN	0	NaN	792	2316	3109
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3111	13.424	NaN	24905	30	0	4135.9	0.106			+	-1	DKKRTEEKL	9	93	396.8913717254064	1187.6522857764191	3	396.89117431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))DKKRTEEKL_	REV__ENSG00000172031|ENST00000370383|EPHX4	58.22992032128504	0.22837015374068087	6				NaN	NaN	0	NaN	793	2316	3109
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3112	13.426	NaN	4341	30	0	676.84	0.106	+			43282	TFGKKKGP	8	59	431.7611074579348	861.5076619826697	2	431.7609558105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TFGKKKGP_	ENSG00000149806|ENST00000529639|FAU;FAU|p.A131T|1|0.24|ENSG00000149806|chr11:65120692-65120692|C/T|missense_variant	68.78682469695295	0.41700713582915416	6				NaN	NaN	0	NaN	794	2316	3109
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3113	13.428	NaN	433.14	30	0	141.87	0.036			+	44312	TSFAKYKGQ	9	11	343.8489685058594	NaN	0	343.8489685058594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TSFAKYKGQ_	REV__ENSG00000127515|ENST00000641129|OR7A10;REV__ENSG00000185385|ENST00000641113|OR7A17;REV__ENSG00000188269|ENST00000322301|OR7A5;REV__OR7A5|p.M284Cfs*2|1|0.15|ENSG00000188269|chr19:14827393-14827393|G/-|frameshift_variant	14.137123925751023	0.3891339986947948	6				NaN	NaN	0	NaN	795	2316	3109
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3131	13.463	NaN	1968.7	30	0	241.65	0.214	+			21974	KSEKKKRRRGQ	11	47	467.62451171875	NaN	0	467.62451171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSEKKKRRRGQ_	KLHDC4|p.R361Qfs*9|1|0.36|ENSG00000104731|chr16:87709632-87709633|-/C|frameshift_variant	25.125986553469783	0.45344013546260314	6				NaN	NaN	0	NaN	810	2319	3130
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3132	13.467	NaN	713.41	30	0	169.07	0.106	+			22560	KTSKVAPGT	9	40	444.76123046875	NaN	0	444.76123046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTSKVAPGT_	ENSG00000163482|ENST00000295709|STK36;nc|ENSG00000163482|Q9NRP7-2|STK36	39.252832667884924	0.27938773122138094	6				NaN	NaN	0	NaN	811	2319	3130
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3133	13.469	NaN	1043.5	30	0	137.58	0.106			+	21912	KRSVTSTQ	8	45	453.75360107421875	NaN	0	453.75360107421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KRSVTSTQ_	REV__ENST00000429755.8_1_17:46669689-46679621:+|nuORF;REV__ENST00000474324.1_1_17:46673424-46679621:+|nuORF;REV__ENST00000481995.5_1_17:46673424-46679621:+|nuORF;REV__ENST00000492897.3_1_17:46669706-46679621:+|nuORF	82.24051045832904	1.7418937515398478	6				NaN	NaN	0	NaN	812	2319	3130
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3134	13.471	NaN	554.82	30	0	157.82	0.035			+	32244	QTIKYLQP	8	40	495.782958984375	NaN	0	495.782958984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QTIKYLQP_	REV__ENSG00000132932|ENST00000381655|ATP8A2;REV__ENST00000281620.10_1_13:26279420-26594120:+|nuORF;REV__ENST00000491840.1_1_13:26141407-26501380:+|nuORF;REV__nc|ENSG00000132932|Q9NTI2-1|ATP8A2	34.172542307311794	1.7418937515398478	6				NaN	NaN	0	NaN	813	2319	3130
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3152	13.509	NaN	3564.6	30	0	659.25	0.215			+	28484	NGLAMPYR	8	59	461.2360181782875	920.457483423375	2	461.236083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NGLAMPYR_	REV__ENSG00000133895|ENST00000450708|MEN1;REV__MEN1|p.R521Gfs*43|3|0.32|ENSG00000133895|chr11:64804621-64804621|G/-|frameshift_variant;REV__nc|ENSG00000133895|O00255-1|MEN1;REV__nc|ENSG00000133895|O00255-3|MEN1	35.200714571348534	0.6875396545722289	6				NaN	NaN	0	NaN	828	2322	3151
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3153	13.512	NaN	3953.9	30	0	533.86	0.106	+			36688	SGPSKWNWL	9	42	358.84906005859375	NaN	0	358.84906005859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SGPSKWNWL_	ENSG00000198231|ENST00000389924|DDX42;ENST00000578593.1_1_17:61889231-61895755:+|nuORF;nc|ENSG00000198231|Q86XP3-2|DDX42	18.262085536374414	0.37517301184500873	6				NaN	NaN	0	NaN	829	2322	3151
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3154	13.514	NaN	2108.8	30	0	433.41	0.034	+			30503	QAFGGRRGQ	9	44	488.75634765625	NaN	0	488.75634765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QAFGGRRGQ_	ENST00000233630.10_1_2:74735069-74735567:-|nuORF	42.396135135203025	0.2590952873412954	6				NaN	NaN	0	NaN	830	2322	3151
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3172	13.551	NaN	18394	30	0	5059.8	0.214			+	24449	LGEVFNLLG	9	68	481.2697051280468	960.5248573228936	2	481.26898193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LGEVFNLLG_	REV__L1PA6_dup546|chr2:49227587-49231532:-|4.547726375381561|0.2927699401366612|3.96|483.0|231|3|anti-sense	97.47269410471826	0.04379738608259218	6				NaN	NaN	0	NaN	845	2325	3171
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3173	13.555	NaN	9539.8	30	0	1195.3	0.106	+			34413	RTSSSTQLK	9	67	504.2781015207385	1006.541650108277	2	504.277587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RTSSSTQLK_	ENSG00000163138|ENST00000503585|PACRGL;nc|ENSG00000163138|Q8N7B6-2|PACRGL;nc|ENSG00000163138|Q8N7B6-3|PACRGL;nc|ENSG00000163138|Q8N7B6-4|PACRGL	120.30596017624542	0.02101454110788768	6				NaN	NaN	0	NaN	846	2325	3171
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3174	13.557	NaN	1951.2	30	0	706.12	0.106			+	11999	FVTLLLHK	8	36	485.8089330784406	NaN	0	485.7748718261719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FVTLLLHK_	REV__tr|U7SLQ6|U7SLQ6_FUSNUTrksystempotassiumuptakeproteinTrkHOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02135PE=4SV=1	14.664097394203935	1.7418937515398478	6				NaN	NaN	0	NaN	847	2325	3171
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3175	13.558	NaN	479.45	30	0	70.547	0.106			+	-1	LCVTLSRK	8	34	488.7835998535156	NaN	0	488.7835998535156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_LC(Carbamidomethyl (C))VTLSRK_	REV__SSX2IP|p.Q516Gfs*48|1|0.16|ENSG00000117155|chr1:84650487-84650488|-/CA|frameshift_variant	23.04248740728303	1.7418937515398478	6				NaN	NaN	0	NaN	848	2325	3171
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3176	13.56	NaN	3073.7	30	0	712	0.106	+			22835	KVGRDVVQK	9	59	514.8138490512433	1027.6131451692866	2	514.8137817382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KVGRDVVQK_	ENSG00000133392|ENST00000300036|MYH11;nc|ENSG00000133392|P35749-2|MYH11;nc|ENSG00000133392|P35749-3|MYH11;nc|ENSG00000133392|P35749-4|MYH11	60.11826168202944	0.21262886028301267	6				NaN	NaN	0	NaN	849	2325	3171
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3177	13.562	NaN	858.08	30	0	175.08	0.034			+	18994	IVTSEVRQ	8	35	466.2638244628906	NaN	0	466.2638244628906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IVTSEVRQ_	REV__AKAP9|p.L1203Yfs*16|1|0.24|ENSG00000127914|chr7:92014319-92014319|T/-|frameshift_variant;REV__AKAP9|p.Q3083Nfs*28|1|0.15|ENSG00000127914|chr7:92089389-92089390|-/TGAATATCAAGCAGCTATGGAATGCC|frameshift_variant;REV__AKAP9|p.T1942Lfs*3|3|0.18|ENSG00000127914|chr7:92062328-92062328|A/-|frameshift_variant;REV__ENSG00000127914|ENST00000356239|AKAP9;REV__ENST00000493453.1_1_7:91570251-91670224:+|nuORF;REV__nc|ENSG00000127914|Q99996-1|AKAP9;REV__nc|ENSG00000127914|Q99996-3|AKAP9;REV__nc|ENSG00000127914|Q99996-4|AKAP9;REV__nc|ENSG00000127914|Q99996-5|AKAP9;REV__nc|ENSG00000127914|Q99996-6|AKAP9	24.20275056022122	1.7418937515398478	6				NaN	NaN	0	NaN	850	2325	3171
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3195	13.6	NaN	3653	30	0	1013	0.214	+			3131	ASHIASNPK	9	44	462.7487694646463	923.4829859960926	2	462.7488098144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASHIASNPK_	EMC2|p.T249Rfs*6|1|0.17|ENSG00000104412|chr8:108479044-108479044|A/-|frameshift_variant;ENSG00000104412|ENST00000220853|EMC2;ENST00000520294.5_1_8:109476316-109498824:+|nuORF	58.22992032128504	0.22837015374068087	6				NaN	NaN	0	NaN	865	2328	3194
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3196	13.603	NaN	6754.8	30	0	1633.1	0.106	+			38486	SSATLASGPA	10	58	431.219328529927	860.424104126654	2	431.2196044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSATLASGPA_	ENSG00000143512|ENST00000343410|HHIPL2	76.7741389293348	0.22197596950688292	6				NaN	NaN	0	NaN	866	2328	3194
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3197	13.605	NaN	3011.7	30	0	460.43	0.106	+			38460	SSAREAHLK	9	50	499.77326997808103	997.5319870229621	2	499.77313232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSAREAHLK_	ENSG00000139428|ENST00000545712|MMAB	70.8162118820467	0.13725933411854815	6				NaN	NaN	0	NaN	867	2328	3194
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3198	13.607	NaN	5804.9	30	0	1405.5	0.106			+	20248	KEMAVRIDN	9	51	538.2818091866037	1074.5490654400073	2	538.283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEMAVRIDN_	REV__tr|U7T5A0|U7T5A0_FUSNUBand7domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00179PE=3SV=1	47.657333605630114	0.33044192980041115	6				NaN	NaN	0	NaN	868	2328	3194
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3199	13.609	NaN	6520.3	30	0	1290.5	0.106			+	-1	SLIMLQVWQSI	11	52	459.24806239307907	1374.7223577794373	3	459.58209228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))SLIM(Oxidation (M))LQVWQSI_	REV__RASGRP2|p.V203I|1|0.37|ENSG00000068831|chr11:64739725-64739725|C/T|missense_variant	37.50817390946774	0.5920388381045607	6				NaN	NaN	0	NaN	869	2328	3194
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3200	13.611	NaN	6939.3	30	0	896.98	0.035	+			13946	GSAAVSGRPRS	11	72	522.7812963275452	NaN	0	522.7823486328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GSAAVSGRPRS_	ENST00000484610.5_1_16:89627367-89627911:+|nuORF;ENST00000563749.1_1_16:89627605-89627911:+|nuORF	40.05817265558897	0.3867246477658885	6				NaN	NaN	0	NaN	870	2328	3194
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3218	13.648	NaN	5254	30	0	563.92	0.214	+			40461	STVRQNVNK	9	67	523.2911691905991	1044.5677854479982	2	523.2914428710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STVRQNVNK_	ENSG00000092208|ENST00000308317|GEMIN2;ENST00000418195.1_1_3:42018516-42019344:+|nuORF;ENST00000525430.1_1_14:39583533-39591807:+|nuORF;nc|ENSG00000092208|O14893-2|GEMIN2;nc|ENSG00000092208|O14893-3|GEMIN2;nc|ENSG00000092208|O14893|GEMIN2	87.69643885390035	0.07135982304947239	6				NaN	NaN	0	NaN	885	2331	3217
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3219	13.652	NaN	3420.4	30	0	1401.4	0.106	+			41400	SVMREGRQK	9	45	364.19756202592924	NaN	0	364.1976013183594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVMREGRQK_	ENSG00000135763|ENST00000258243|URB2	28.081489160057373	0.33578952234132536	6				NaN	NaN	0	NaN	886	2331	3217
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3220	13.654	NaN	650.16	30	0	74.118	0.106	+			21748	KQNETTAMK	9	33	525.7664184570312	NaN	0	525.7664184570312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KQNETTAMK_	ENSG00000136436|ENST00000258947|CALCOCO2;ENST00000509112.1_1_17:46928975-46930413:+|nuORF;nc|ENSG00000136436|Q13137-2|CALCOCO2;nc|ENSG00000136436|Q13137-3|CALCOCO2;nc|ENSG00000136436|Q13137-4|CALCOCO2;nc|ENSG00000136436|Q13137-5|CALCOCO2	45.97224482568171	0.23445038899310136	6				NaN	NaN	0	NaN	887	2331	3217
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3221	13.656	NaN	61135	30	0	34362	0.106	+			41470	SVNQGQNIHRK	11	76	427.565329078622	1279.6741578360661	3	427.5653381347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVNQGQNIHRK_	CFTR|p.E1044Dfs*20|1|0.04|ENSG00000001626|chr7:117610661-117610662|-/TCAAAGAAAAC|frameshift_variant;CFTR|p.G1208Afs*3|1|0.3|ENSG00000001626|chr7:117627672-117627672|G/-|frameshift_variant;CFTR|p.L1258Ffs*7|1|0.26|ENSG00000001626|chr7:117642487-117642488|-/T|frameshift_variant;CFTR|p.S1297Lfs*31|1|0.28|ENSG00000001626|chr7:117652852-117652852|T/-|frameshift_variant;ENSG00000001626|ENST00000003084|CFTR;nc|ENSG00000001626|P13569-2|CFTR	57.148748479083515	0.34890646465650643	6				NaN	NaN	0	NaN	888	2331	3217
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3222	13.657	NaN	2654.3	30	0	396.23	0.106	+			38838	SSNKPAVTTK	10	62	516.7880485064093	1031.5615440796184	2	516.7885131835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSNKPAVTTK_	ENSG00000166197|ENST00000605788|NOLC1;nc|ENSG00000166197|Q14978-2|NOLC1;nc|ENSG00000166197|Q14978-3|NOLC1	84.81729255234993	0.1607459278640679	6				NaN	NaN	0	NaN	889	2331	3217
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3223	13.659	NaN	4067	30	0	517.31	0.035	+			999	AEKKSKAEL	9	62	502.2929226961442	1002.5712924590885	2	502.2926025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEKKSKAEL_	ENSG00000155827|ENST00000389120|RNF20	82.83050618871818	0.08530945204495013	6				NaN	NaN	0	NaN	890	2331	3217
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3224	13.66	NaN	902.34	30	0	204.57	0.144				-1	GLVCIMALLG	10	31	349.530876653804	NaN	0	349.1964416503906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_GLVC(Carbamidomethyl (C))IMALLG_	ENSG00000171942|ENST00000305899|OR10H2	31.529811441608018	0.39664753963064203	6				NaN	NaN	0	NaN	891	2331	3217
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3242	13.698	NaN	22429	30	0	7405	0.214	+			14344	GTAAKSITK	9	73	438.76109967323566	875.5076464132713	2	438.7607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTAAKSITK_	ENSG00000133574|ENST00000255945|GIMAP4	168.25843898104137	0.0030641937004078144	6				NaN	NaN	0	NaN	906	2334	3241
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3243	13.701	NaN	3200.5	30	0	988.86	0.106				-1	IGKIGTVMTF	10	34	361.53656005859375	NaN	0	361.53656005859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_IGKIGTVM(Oxidation (M))TF_	ENSG00000099977|ENST00000398344|DDT	27.047317107675042	0.41136583337917604	6				NaN	NaN	0	NaN	907	2334	3241
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3244	13.703	NaN	2786.3	30	0	909.92	0.106				-1	IEAQKKKME	9	44	374.2058410644531	NaN	0	374.2058410644531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_IEAQKKKM(Oxidation (M))E_	CAMSAP2|p.K1052Rfs*43|1|0.32|ENSG00000118200|chr1:200849887-200849887|A/-|frameshift_variant;CAMSAP2|p.M1437*|7|0.32|ENSG00000118200|chr1:200857892-200857892|A/-|frameshift_variant;ENSG00000118200|ENST00000358823|CAMSAP2;ENSG00000130559|ENST00000389532|CAMSAP1;ENST00000483991.5_1_9:138703157-138717996:-|nuORF;nc|ENSG00000118200|Q08AD1-2|CAMSAP2;nc|ENSG00000118200|Q08AD1|CAMSAP2;nc|ENSG00000130559|Q5T5Y3-2|CAMSAP1;nc|ENSG00000130559|Q5T5Y3-3|CAMSAP1	31.529811441608018	0.3183796599642538	6				NaN	NaN	0	NaN	908	2334	3241
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3245	13.705	NaN	1208.4	30	0	176.52	0.034			+	-1	GVPFMLKK	8	37	468.2743987692548	934.5342446053096	2	468.27349853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_GVPFM(Oxidation (M))LKK_	REV__ADGRE2|p.I749Rfs*49|1|0.1|ENSG00000127507|chr19:14743716-14743722|TGCAAGA/-|frameshift_variant;REV__ENSG00000127507|ENST00000315576|ADGRE2;REV__ENST00000360222.8_1_19:14854584-14867061:-|nuORF;REV__nc|ENSG00000127507|Q9UHX3-2|ADGRE2;REV__nc|ENSG00000127507|Q9UHX3-3|ADGRE2;REV__nc|ENSG00000127507|Q9UHX3-4|ADGRE2;REV__nc|ENSG00000127507|Q9UHX3-5|ADGRE2;REV__nc|ENSG00000127507|Q9UHX3-6|ADGRE2	20.481830146152948	0.8005983782650069	6				NaN	NaN	0	NaN	909	2334	3241
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3263	13.742	NaN	14539	30	0	5661.9	0.215	+			22233	KSYDQVHSGK	10	75	383.5281253646207	1147.5625466940621	3	383.5278015136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSYDQVHSGK_	ACOX1|p.N501Tfs*6|1|0.47|ENSG00000161533|chr17:75949577-75949577|T/-|frameshift_variant;ENSG00000161533|ENST00000293217|ACOX1;nc|ENSG00000161533|Q15067-3|ACOX1;nc|ENSG00000161533|Q15067|ACOX1	58.2462437865262	0.38179041844353556	6				NaN	NaN	0	NaN	924	2337	3262
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3264	13.746	NaN	1911.9	30	0	474.26	0.106	+			7529	DGSGRRGPQK	10	30	353.18670654296875	NaN	0	353.18670654296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DGSGRRGPQK_	ENSG00000005379|ENST00000343736|TSPOAP1;nc|ENSG00000005379|O95153-2|TSPOAP1;nc|ENSG00000005379|O95153-3|TSPOAP1	40.05817265558897	0.3684561582319974	6				NaN	NaN	0	NaN	925	2337	3262
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3265	13.748	NaN	4257.7	30	0	1466.7	0.106	+			49185	VVMRDPNTK	9	39	359.1901925606885	1074.5487482822655	3	359.190185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_VVM(Oxidation (M))RDPNTK_	chr12:54282662-54282800|482|460.96|0.0|25.46|+|ENST00000677249|HNRNPA1,HNRNPA1;ENSG00000135486|ENST00000340913|HNRNPA1;ENSG00000139675|ENST00000357495|HNRNPA1L2;ENSG00000224578|ENST00000565308|HNRNPA1L3;ENST00000441603.1_1_11:5593122-5593311:-|nuORF;ENST00000452488.1_1_2:41383770-41384067:+|nuORF;ENST00000457695.2_1_X:100110922-100111255:-|nuORF;ENST00000575692.1_1_17:2210089-2210875:+|nuORF;nc|ENSG00000135486|P09651-2|HNRNPA1;nc|ENSG00000135486|P09651-3|HNRNPA1	56.43379154798735	0.2433427591689151	6				NaN	NaN	0	NaN	926	2337	3262
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3266	13.75	NaN	4481.9	30	0	1262.4	0.106	+			22720	KVAQATKP	8	55	421.75833402191205	841.5021151106241	2	421.7580871582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KVAQATKP_	ENSG00000170748|ENST00000306904|RBMXL2	93.19546047674547	0.2677966331495483	6				NaN	NaN	0	NaN	927	2337	3262
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3267	13.752	NaN	3144.7	30	0	1350.5	0.106			+	31377	QKFVQLIIE	9	37	373.2239685058594	NaN	0	373.2239685058594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QKFVQLIIE_	REV__ENSG00000167306|ENST00000285039|MYO5B;REV__MIB1-MYO5B|1|fusion;REV__nc|ENSG00000167306|Q9ULV0-2|MYO5B;REV__nc|ENSG00000167306|Q9ULV0-3|MYO5B	32.81241826257853	0.3119040447479903	6				NaN	NaN	0	NaN	928	2337	3262
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3268	13.754	NaN	1177.7	30	0	86.388	0.034			+	37485	SLKQELSSA	9	52	481.76116943359375	NaN	0	481.76116943359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLKQELSSA_	REV__ENSG00000076984|ENST00000397979|MAP2K7;REV__MAP2K7|p.P292Qfs*119|2|0.25|ENSG00000076984|chr19:7911264-7911264|C/-|frameshift_variant;REV__nc|ENSG00000076984|O14733-2|MAP2K7;REV__nc|ENSG00000076984|O14733-3|MAP2K7;REV__nc|ENSG00000076984|O14733-4|MAP2K7	47.95952297671804	0.22075498469600283	6				NaN	NaN	0	NaN	929	2337	3262
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3269	13.754	NaN	1201.4	30	0	202.24	0.143	+			48604	VTRFVNEAV	9	35	345.52655029296875	NaN	0	345.52655029296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VTRFVNEAV_	ENSG00000084754|ENST00000380649|HADHA;ENST00000540341.1_1_12:8789534-8790158:+|nuORF;HADHA|p.R676H|1|0.4|ENSG00000084754|chr2:26191602-26191602|C/T|missense_variant	26.69291269510374	0.34280015626154364	6				NaN	NaN	0	NaN	930	2337	3262
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3287	13.794	NaN	4313.6	30	0	1597.2	0.214	+			3912	ATARPRPVK	9	47	498.3089294433594	NaN	0	498.3089294433594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATARPRPVK_	ENSG00000170892|ENST00000396388|TSEN34	35.15202426646627	0.3000918603816441	6				NaN	NaN	0	NaN	945	2340	3286
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3288	13.797	NaN	3802.8	30	0	675.62	0.106	+			20600	KGAGPLRGK	9	51	442.27727037871335	882.5399878242267	2	442.2770690917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KGAGPLRGK_	ENSG00000067369|ENST00000382044|TP53BP1;ENST00000411772.5_2_15:43699583-43738985:-|nuORF;ENST00000572085.5_1_15:43707600-43785241:-|nuORF;nc|ENSG00000067369|Q12888-3|TP53BP1;nc|ENSG00000067369|Q12888|TP53BP1;TP53BP1|p.D1461Rfs*12|1|0.37|ENSG00000067369|chr15:43420584-43420591|GAGAGTCA/-|frameshift_variant	76.7741389293348	0.11149722112137898	6				NaN	NaN	0	NaN	946	2340	3286
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3289	13.799	NaN	9013.7	30	0	2757.8	0.106				-1	CMVLVLLLQNS	11	42	416.8946879589489	1247.6622344770467	3	416.8944396972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_CM(Oxidation (M))VLVLLLQNS_	COL21A1|p.E790Dfs*24|1|0.04|ENSG00000124749|chr6:56060778-56060779|-/AGAGGATATAAGTGAGGTGAAGAAGAAAACAGATAACA|frameshift_variant;COL21A1|p.G902Mfs*52|1|0.44|ENSG00000124749|chr6:56057828-56057829|-/GGAGGGCCCTCTGGACCTAAGATGGGACATT|frameshift_variant;COL21A1|p.K712Rfs*48|1|0.1|ENSG00000124749|chr6:56064615-56064615|T/-|frameshift_variant;ENSG00000124749|ENST00000244728|COL21A1;nc|ENSG00000124749|Q96P44-3|COL21A1	16.52985593315525	0.793090074565524	6				NaN	NaN	0	NaN	947	2340	3286
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3290	13.801	NaN	783.61	30	0	52.947	0.106	+			20036	KEKAEKERL	9	40	565.8304443359375	NaN	0	565.8304443359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEKAEKERL_	ENSG00000131504|ENST00000389054|DIAPH1;nc|ENSG00000131504|O60610-2|DIAPH1;nc|ENSG00000131504|O60610-3|DIAPH1	23.52269567125451	0.3573684076213556	6				NaN	NaN	0	NaN	948	2340	3286
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3291	13.803	NaN	1616.1	30	0	440.79	0.106			+	45853	VALLLYSQE	9	38	518.2879028320312	NaN	0	518.2879028320312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VALLLYSQE_	REV__MYCBP2|p.T4311Pfs*37|1|0.14|ENSG00000005810|chr13:77059619-77059619|G/-|frameshift_variant	23.04248740728303	0.3589936788096251	6				NaN	NaN	0	NaN	949	2340	3286
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3292	13.805	NaN	1769.3	30	0	476.14	0.035	+			21126	KKSGAQKKK	9	45	501.8252967339377	1001.6360405346754	2	501.82440185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KKSGAQKKK_	ENSG00000248712|ENST00000503566|CCDC153;ENST00000375140.7_1_11:119064239-119066706:-|nuORF	60.11826168202944	0.21262886028301267	6				NaN	NaN	0	NaN	950	2340	3286
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3293	13.805	NaN	580.8	30	0	147.99	0.141			+	19041	IYGGIINLQV	10	26	545.3184814453125	NaN	0	545.3184814453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IYGGIINLQV_	REV__ENSG00000034693|ENST00000367591|PEX3;REV__PEX3|p.S167Rfs*13|1|0.06|ENSG00000034693|chr6:143471426-143471427|-/ATCTGAAA|frameshift_variant	18.324413293986947	0.4201028297492154	6				NaN	NaN	0	NaN	951	2340	3286
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3311	13.844	NaN	2034.5	30	0	324.56	0.214	+			5888	AVKRKQFEK	9	33	378.56457494382073	1132.6718954316623	3	378.564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVKRKQFEK_	ENSG00000125445|ENST00000245539|MRPS7;MRPS7|p.L162Pfs*29|1|0.05|ENSG00000125445|chr17:75263482-75263483|-/C|frameshift_variant	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	966	2343	3310
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3312	13.847	NaN	1111.6	30	0	324.26	0.106				-1	LNQVPPPACV	10	36	547.7880249023438	NaN	0	547.7880249023438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LNQVPPPAC(Carbamidomethyl (C))V_	ENST00000204005.13_1_19:41114149-41118026:+|nuORF	24.20275056022122	0.4201028297492154	6				NaN	NaN	0	NaN	967	2343	3310
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3313	13.849	NaN	1346.8	30	0	335.5	0.106	+			24882	LKHMESRQK	9	29	386.21352574429716	NaN	0	386.2133483886719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LKHMESRQK_	ENSG00000130948|ENST00000375263|HSD17B3;ENST00000464104.5_1_9:98997744-99012284:-|nuORF;nc|ENSG00000130948|P37058-2|HSD17B3	23.52269567125451	0.3573684076213556	6				NaN	NaN	0	NaN	968	2343	3310
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3314	13.851	NaN	1714.3	30	0	214.97	0.106			+	8686	EEAERKKAR	9	59	558.8105255524265	NaN	0	558.8114624023438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EEAERKKAR_	REV__ENSG00000146963|ENST00000354926|LUC7L2;REV__ENST00000463912.5_1_7:139083347-139097327:+|nuORF;REV__nc|ENSG00000164898|Q96HJ9-2|FMC1;REV__nc|ENSG00000269955|Q9Y383-2|LUC7L2;REV__nc|ENSG00000269955|Q9Y383-3|LUC7L2	51.33545320467046	0.19748963086191895	6				NaN	NaN	0	NaN	969	2343	3310
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3315	13.853	NaN	182.85	30	0	48.909	0.035				-1	QNIQKCEK	8	16	524.2671508789062	NaN	0	524.2671508789062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_QNIQKC(Carbamidomethyl (C))EK_	ENST00000367409.8_1_1:197111523-197111619:-|nuORF	15.641811463095205	1.7418937515398478	6				NaN	NaN	0	NaN	970	2343	3310
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3333	13.891	NaN	59664	30	0	7660	0.214	+			18788	ITQRGNVAK	9	95	493.7907250098858	985.5668970865717	2	493.79046630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ITQRGNVAK_	ENSG00000120742|ENST00000239944|SERP1;ENSG00000151778|ENST00000379179|SERP2	122.93914200107957	0.019420478173996256	6				NaN	NaN	0	NaN	985	2346	3332
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3334	13.894	NaN	1758.5	30	0	378.33	0.106	+			19310	KAGKGPPGR	9	38	434.26140653608707	NaN	0	434.2613830566406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KAGKGPPGR_	ZDHHC19|p.V270Gfs*83|1|0.18|ENSG00000163958|chr3:196198416-196198416|A/-|frameshift_variant	24.20275056022122	0.35506675290109213	6				NaN	NaN	0	NaN	986	2346	3332
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3335	13.896	NaN	8207.7	30	0	939.77	0.106	+			16360	HEMTKTASA	9	71	488.2317948585026	974.4490367838052	2	488.2315673828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HEMTKTASA_	ENSG00000060762|ENST00000360961|MPC1	158.07458414430337	0.004987072822166904	6				NaN	NaN	0	NaN	987	2346	3332
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3336	13.898	NaN	2067.1	30	0	425.89	0.106				-1	ATVDKTVCKK	10	39	383.88116455078125	NaN	0	383.88116455078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_ATVDKTVC(Carbamidomethyl (C))KK_	ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1670Tfs*23|1|0.29|ENSG00000174231|chr17:1659487-1659487|C/-|frameshift_variant	27.047317107675042	0.41136583337917604	6				NaN	NaN	0	NaN	988	2346	3332
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3337	13.9	NaN	1440.6	30	0	217.39	0.106			+	29952	PNEERKPK	8	46	499.27484364795066	NaN	0	499.2745056152344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PNEERKPK_	REV__ENSG00000135365|ENST00000676320|PHF21A;REV__ENST00000527401.5_1_11:45957138-45987102:-|nuORF;REV__ENST00000527753.5_1_11:45959861-45986961:-|nuORF;REV__nc|ENSG00000135365|Q96BD5-2|PHF21A;REV__nc|ENSG00000135365|Q96BD5|PHF21A;REV__PHF21A|p.S665Lfs*10|1|0.08|ENSG00000135365|chr11:45934018-45934019|-/G|frameshift_variant	68.78682469695295	1.7418937515398478	6				NaN	NaN	0	NaN	989	2346	3332
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3338	13.902	NaN	21416	30	0	7446.7	0.036	+			48370	VTHEGSTVEK	10	73	543.775087293663	1085.5356216541259	2	543.7753295898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTHEGSTVEK_	nc|ENSG00000211675|P0CG04|IGLC1;nc|ENSG00000211677|P0DOY2|IGLC2;nc|ENSG00000211679|P0DOY3|IGLC3;nc|ENSG00000211685|A0M8Q6|IGLC7;nc|ENSG00000222037|P0CF74|IGLC6;nc|ENSG00000254709|B9A064|IGLL5	133.7523857240709	0.012419833933541829	6				NaN	NaN	0	NaN	990	2346	3332
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3339	13.902	NaN	1624.6	30	0	503.37	0.14	+			4066	ATDKQPYSK	9	50	519.2667704698114	NaN	0	519.266357421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATDKQPYSK_	ENSG00000148154|ENST00000374279|UGCG;ENST00000489355.1_1_9:114659495-114677080:+|nuORF;ENST00000490110.5_1_9:114659495-114678089:+|nuORF;ENST00000495085.1_1_9:114659495-114685228:+|nuORF;UGCG|p.L365Cfs*9|4|0.31|ENSG00000148154|chr9:111932900-111932900|T/-|frameshift_variant	46.45678178249821	0.2311111838007999	6				NaN	NaN	0	NaN	991	2346	3332
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3357	13.942	NaN	7017	30	0	1520.3	0.215			+	46757	VGSRPPSAR	9	65	463.76193678623736	925.5093206392747	2	463.7615966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VGSRPPSAR_	REV__nc|ENSG00000204842|Q99700-2|ATXN2;REV__nc|ENSG00000204842|Q99700-4|ATXN2;REV__nc|ENSG00000204842|Q99700|ATXN2	77.31757898189308	0.1091473830098891	6				NaN	NaN	0	NaN	1006	2349	3356
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3358	13.945	NaN	38056	30	0	7618.3	0.106	+			34242	RTGKVTVEK	9	80	509.3062545045917	1016.5979560759835	2	509.8077697753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RTGKVTVEK_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	106.68306549817024	0.032382560583716295	6				NaN	NaN	0	NaN	1007	2349	3356
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3359	13.947	NaN	2108.3	30	0	386.11	0.106	+			41465	SVNPNKPATK	10	56	528.2957769669631	1054.577001000726	2	528.2957153320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVNPNKPATK_	ENSG00000102081|ENST00000370475|FMR1;nc|ENSG00000102081|Q06787-10|FMR1;nc|ENSG00000102081|Q06787-11|FMR1;nc|ENSG00000102081|Q06787-2|FMR1;nc|ENSG00000102081|Q06787-3|FMR1;nc|ENSG00000102081|Q06787-4|FMR1;nc|ENSG00000102081|Q06787-5|FMR1;nc|ENSG00000102081|Q06787-6|FMR1;nc|ENSG00000102081|Q06787-7|FMR1;nc|ENSG00000102081|Q06787-8|FMR1;nc|ENSG00000102081|Q06787-9|FMR1	77.53327743719008	0.21577387331637743	6				NaN	NaN	0	NaN	1008	2349	3356
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3360	13.949	NaN	1095.8	30	0	226.67	0.106	+			32801	RATKPTVQK	9	47	514.8138490512433	1027.6131451692866	2	514.8143920898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RATKPTVQK_	ENST00000263196.11_1_22:19055732-19076988:-|nuORF	47.95952297671804	0.32689736945648856	6				NaN	NaN	0	NaN	1009	2349	3356
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3361	13.951	NaN	2168.6	30	0	436.17	0.034	+			20850	KILGNLQQ	8	46	457.2765376213606	912.5385223095212	2	457.27593994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KILGNLQQ_	ENSG00000032444|ENST00000600737|PNPLA6;nc|ENSG00000032444|Q8IY17-2|PNPLA6;nc|ENSG00000032444|Q8IY17-3|PNPLA6;nc|ENSG00000032444|Q8IY17-5|PNPLA6;nc|ENSG00000032444|Q8IY17|PNPLA6;PNPLA6|p.S1175Pfs*10|1|0.55|ENSG00000032444|chr19:7558944-7558944|G/-|frameshift_variant	47.91560031466742	0.6071945918984287	6				NaN	NaN	0	NaN	1010	2349	3356
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3379	13.988	NaN	6665.4	30	0	1473.4	0.214				-1	VVMRDPQTK	9	62	545.2897691903908	1088.5649854475814	2	545.2903442382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_VVM(Oxidation (M))RDPQTK_	ENSG00000170144|ENST00000392524|HNRNPA3;ENST00000437410.2_1_1:54441353-54441674:-|nuORF;ENST00000472163.1_1_3:75263799-75264780:+|nuORF;HNRNPA3|p.K200Rfs*147|1|0.13|ENSG00000170144|chr2:177216544-177216544|A/-|frameshift_variant;HNRNPA3|p.Y267Lfs*2|1|0.62|ENSG00000170144|chr2:177216918-177216919|-/T|frameshift_variant;nc|ENSG00000170144|P51991-2|HNRNPA3	44.377184641726394	0.36891676396732553	6				NaN	NaN	0	NaN	1025	2352	3378
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3380	13.992	NaN	4055.1	30	0	580.61	0.106	+			4207	ATFVNFRFGE	10	52	396.5313720703125	NaN	0	396.5313720703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATFVNFRFGE_	ENST00000302243.11_1_16:70406206-70406689:+|nuORF	25.125986553469783	0.41767453237088564	6				NaN	NaN	0	NaN	1026	2352	3378
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3381	13.994	NaN	12260	30	0	2406.7	0.106			+	46617	VFVPVVALEQ	10	67	367.5488142790624	NaN	0	367.2331237792969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VFVPVVALEQ_	REV__ENSG00000163083|ENST00000295228|INHBB	30.503639358989545	0.4000169810673414	6				NaN	NaN	0	NaN	1027	2352	3378
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3382	13.996	NaN	702.48	30	0	178.79	0.106	+			31577	QLRALLLS	8	37	457.2951965332031	NaN	0	457.2951965332031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QLRALLLS_	ENSG00000188807|ENST00000340381|TMEM201;nc|ENSG00000188807|Q5SNT2-2|TMEM201;TMEM201|p.P547Lfs*38|1|0.31|ENSG00000188807|chr1:9610676-9610676|C/-|frameshift_variant;TMEM201|p.R180H|1|0.29|ENSG00000188807|chr1:9598558-9598558|G/A|missense_variant	47.91560031466742	1.7418937515398478	6				NaN	NaN	0	NaN	1028	2352	3378
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3383	13.998	NaN	1304	30	0	251.29	0.106			+	9372	EKARTHLP	8	52	476.2703372256528	NaN	0	476.270263671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EKARTHLP_	REV__ENST00000535351.1_1_14:22887819-22887924:-|nuORF	73.97473282117947	1.7418937515398478	6				NaN	NaN	0	NaN	1029	2352	3378
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3384	13.999	NaN	1403	30	0	183.99	0.037			+	-1	HDEQMGPVQI	10	41	585.2685958776034	NaN	0	585.2689208984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_HDEQM(Oxidation (M))GPVQI_	REV__ENST00000409177.5_1_2:105984159-105990083:-|nuORF	56.72105179125745	0.2610545891966633	6				NaN	NaN	0	NaN	1030	2352	3378
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3402	14.037	NaN	3288	30	0	680.48	0.214			+	49067	VVKFVADPPK	10	41	367.2210215957705	NaN	0	366.90447998046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVKFVADPPK_	REV__ENSG00000170214|ENST00000306675|ADRA1B	29.170058357718403	0.40439580130713204	6				NaN	NaN	0	NaN	1045	2355	3401
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3403	14.041	NaN	8486.6	30	0	2110.5	0.106	+			2926	ASCQFRKEK	9	45	385.19737181251776	NaN	0	385.1973876953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_ASC(Carbamidomethyl (C))QFRKEK_	ENSG00000082512|ENST00000261464|TRAF5;ENST00000462410.5_1_1:211533229-211533703:+|nuORF;nc|ENSG00000082512|O00463-2|TRAF5	44.377184641726394	0.24544280798894275	6				NaN	NaN	0	NaN	1046	2355	3401
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3404	14.043	NaN	3874.2	30	0	1007.1	0.106	+			15024	GTNHPDVAK	9	51	469.7381173601663	937.4616817871326	2	469.73797607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTNHPDVAK_	ENSG00000137171|ENST00000347162|KLC4;ENST00000467906.5_1_6:43030654-43039600:+|nuORF;nc|ENSG00000137171|Q9NSK0-3|KLC4;nc|ENSG00000137171|Q9NSK0-5|KLC4	90.60085204095205	0.06317133949006545	6				NaN	NaN	0	NaN	1047	2355	3401
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3405	14.044	NaN	2173.9	30	0	279.71	0.106			+	2812	ARYLLGKKQ	9	56	538.8322246813003	1075.6498964294005	2	538.8324584960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ARYLLGKKQ_	REV__DNAJB12|p.E337K|1|0.21|ENSG00000148719|chr10:72336623-72336623|C/T|missense_variant	44.116797842482775	0.37197099687881774	6				NaN	NaN	0	NaN	1048	2355	3401
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3406	14.046	NaN	817.45	30	0	101.58	0.034	+			33489	RKEAAGTGK	9	44	459.2615051269531	NaN	0	459.2615051269531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RKEAAGTGK_	ENSG00000079432|ENST00000681038|CIC;nc|ENSG00000079432|Q96RK0-2|CIC	47.95952297671804	0.22075498469600283	6				NaN	NaN	0	NaN	1049	2355	3401
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3424	14.084	NaN	11150	30	0	1769.5	0.214			+	38918	SSPRSSLNK	9	75	488.26458588436157	974.5146188355232	2	488.264404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSPRSSLNK_	REV__ENST00000606797.5_1_6:149642468-149663891:+|nuORF	88.17693792209575	0.07000514020414955	6				NaN	NaN	0	NaN	1064	2358	3423
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3425	14.087	NaN	4482.9	30	0	3159.4	0.106			+	-1	VWIQLGCMTGQ	11	38	417.8661066417185	NaN	0	417.86602783203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_VWIQLGCM(Oxidation (M))TGQ_	REV__ENST00000557963.1_1_15:101421085-101421394:+|nuORF	23.37791116691581	0.456735970842152	6				NaN	NaN	0	NaN	1065	2358	3423
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3426	14.089	NaN	2479.2	30	0	475.52	0.106	+			17210	HVGDPSVKK	9	49	483.7721072785069	965.5296616238138	2	483.77197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HVGDPSVKK_	ENSG00000057294|ENST00000340811|PKP2;nc|ENSG00000057294|Q99959|PKP2	76.16968421966216	0.11411088698345859	6				NaN	NaN	0	NaN	1066	2358	3423
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3427	14.091	NaN	828.82	30	0	255.64	0.106			+	22785	KVFFPEKDN	9	34	562.2924194335938	NaN	0	562.2924194335938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KVFFPEKDN_	REV__ENSG00000163781|ENST00000260810|TOPBP1;REV__TOPBP1|p.F24Lfs*7|2|0.24|ENSG00000163781|chr3:133661056-133661056|A/-|frameshift_variant;REV__TOPBP1|p.F268Lfs*53|1|0.15|ENSG00000163781|chr3:133653463-133653463|A/-|frameshift_variant;REV__TOPBP1|p.K1266Nfs*10|1|0.13|ENSG00000163781|chr3:133616887-133616887|T/-|frameshift_variant;REV__TOPBP1|p.R1378Sfs*18|1|0.04|ENSG00000163781|chr3:133611043-133611044|-/AAAAGAGAATGTG|frameshift_variant;REV__TOPBP1|p.R964Efs*12|1|0.19|ENSG00000163781|chr3:133624090-133624090|T/-|frameshift_variant	25.57405402267927	0.3484490411150625	6				NaN	NaN	0	NaN	1067	2358	3423
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3428	14.093	NaN	1326.3	30	0	339.9	0.034	+			29922	PLSVYLPTG	9	44	473.76386102052965	945.5131691078593	2	473.7642517089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PLSVYLPTG_	ENST00000557275.5_1_14:95875019-95875331:-|nuORF	25.450171626174864	0.5654022654467333	6				NaN	NaN	0	NaN	1068	2358	3423
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3446	14.131	NaN	4555.2	30	0	774.43	0.214	+			38243	SQMKIVHKK	9	56	366.88653564453125	NaN	0	366.88653564453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SQMKIVHKK_	ENSG00000189266|ENST00000334351|PNRC2	66.96192283764107	0.11962625698446946	6				NaN	NaN	0	NaN	1083	2361	3445
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3447	14.134	NaN	4540.1	30	0	2442.4	0.106	+			17114	HSLAPGSVAK	10	24	322.8503571502286	965.5292420508858	3	322.8504333496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HSLAPGSVAK_	ENSG00000133401|ENST00000438447|PDZD2;ENST00000502489.5_1_5:31983264-32077762:+|nuORF;nc|ENSG00000133401|O15018-2|PDZD2;PDZD2|p.D2774Rfs*7|1|0.29|ENSG00000133401|chr5:32101201-32101202|-/G|frameshift_variant;PDZD2|p.E2629Kfs*37|1|0.23|ENSG00000133401|chr5:32097314-32097314|A/-|frameshift_variant;PDZD2|p.K1843Rfs*31|3|0.26|ENSG00000133401|chr5:32088970-32088970|A/-|frameshift_variant;PDZD2|p.Q1108Sfs*17|1|0.35|ENSG00000133401|chr5:32074423-32074423|C/-|frameshift_variant;PDZD2|p.S2770Gfs*12|1|0.04|ENSG00000133401|chr5:32101193-32101194|-/GGGT|frameshift_variant;PDZD2|p.V1845Rfs*6|2|0.38|ENSG00000133401|chr5:32088969-32088970|-/A|frameshift_variant	20.030474535948922	0.7146664069068879	6				NaN	NaN	0	NaN	1084	2361	3445
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3448	14.136	NaN	818.05	30	0	454.32	0.106	+			5575	AVASDGKKIK	10	21	339.54166519122276	NaN	0	339.54144287109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVASDGKKIK_	ENSG00000174948|ENST00000389740|GPR149;GPR149|p.I582Nfs*6|1|0.33|ENSG00000174948|chr3:154338150-154338151|-/T|frameshift_variant	15.641811463095205	0.4201028297492154	6				NaN	NaN	0	NaN	1085	2361	3445
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3449	14.138	NaN	1465.8	30	0	199.23	0.106	+			21507	KNMEKAKA	8	56	468.25278530414977	NaN	0	468.2528381347656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_KNM(Oxidation (M))EKAKA_	ENST00000426801.1_1_2:210045165-210045405:+|nuORF	68.78682469695295	1.7418937515398478	6				NaN	NaN	0	NaN	1086	2361	3445
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3450	14.14	NaN	1192.7	30	0	122.37	0.106	+			397	AASPAAAPQ	9	45	392.2037573584645	782.392961783729	2	392.2034606933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AASPAAAPQ_	KRTAP5-5|p.G94Afs*157|1|0.4|ENSG00000185940|chr11:1630117-1630117|G/-|frameshift_variant	53.351449002276354	0.2690372970092375	6				NaN	NaN	0	NaN	1087	2361	3445
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3451	14.142	NaN	4457.9	30	0	1503.9	0.037			+	38974	SSRWLLAMK	9	38	364.5402157272941	1090.5988177820823	3	364.5404052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSRWLLAMK_	REV__nc|ENSG00000121380|Q9BZR8-3|BCL2L14	23.04248740728303	0.5879033540491928	6				NaN	NaN	0	NaN	1088	2361	3445
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3452	14.142	NaN	1160.4	30	0	219.87	0.141	+			9010	EGAGSSALKR	10	25	325.8453674316406	NaN	0	325.8453674316406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EGAGSSALKR_	ENSG00000165209|ENST00000348403|STRBP;nc|ENSG00000165209|Q96SI9-2|STRBP	20.94693142431847	0.4201028297492154	6				NaN	NaN	0	NaN	1089	2361	3445
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3470	14.182	NaN	51998	30	0	8880.5	0.214	+			5407	ATYGKPVHH	9	82	505.26445364083315	1008.5143543484663	2	505.26446533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATYGKPVHH_	ENSG00000174748|ENST00000307839|RPL15;ENST00000436146.1_1_3:23959450-23960989:+|nuORF;ENST00000490223.1_1_3:23959920-23960989:+|nuORF;nc|ENSG00000174748|P61313-2|RPL15	113.41158876095287	0.025516849225023126	6				NaN	NaN	0	NaN	1104	2364	3469
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3471	14.185	NaN	1588.3	30	0	243.52	0.106	+			14169	GSNPKAHIAAK	11	52	547.3097534179688	NaN	0	547.3097534179688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSNPKAHIAAK_	ENSG00000107862|ENST00000369983|GBF1;GBF1|p.D1798Tfs*11|1|0.46|ENSG00000107862|chr10:102382143-102382143|C/-|frameshift_variant;GBF1|p.S1486Tfs*46|1|0.17|ENSG00000107862|chr10:102377105-102377106|-/C|frameshift_variant;nc|ENSG00000107862|Q92538-1|GBF1;nc|ENSG00000107862|Q92538-2|GBF1;nc|ENSG00000107862|Q92538-3|GBF1	43.650786325866115	0.3609211547700893	6				NaN	NaN	0	NaN	1105	2364	3469
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3472	14.187	NaN	49473	30	0	7305.5	0.106	+			39071	SSSRAVVVKK	10	94	354.220535845899	1059.639778137897	3	354.2206726074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSSRAVVVKK_	CON__H-INV:HIT000292931;CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	104.42354056486148	0.06456012287859861	6				NaN	NaN	0	NaN	1106	2364	3469
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3473	14.189	NaN	8547.3	30	0	1423.3	0.106	+			20995	KKGKADTGKK	10	64	530.8270726718611	1059.639592410522	2	530.8275146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KKGKADTGKK_	ENST00000398005.3_1_13:59584546-59584735:+|nuORF	96.66504779109242	0.09291513985748291	6				NaN	NaN	0	NaN	1107	2364	3469
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3474	14.191	NaN	1918.9	30	0	218.3	0.106			+	21823	KRETTGAGQK	10	53	538.2974447126222	NaN	0	538.297119140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KRETTGAGQK_	REV__ENSG00000147010|ENST00000397821|SH3KBP1;REV__nc|ENSG00000147010|Q96B97-2|SH3KBP1;REV__nc|ENSG00000147010|Q96B97-3|SH3KBP1;REV__SH3KBP1|p.L574Cfs*39|3|0.28|ENSG00000147010|chrX:19542097-19542097|G/-|frameshift_variant	35.15202426646627	0.38475398474706135	6				NaN	NaN	0	NaN	1108	2364	3469
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3475	14.193	NaN	1649.8	30	0	295.61	0.032	+			1715	AGVTGKSGL	9	44	395.2270812988281	NaN	0	395.2270812988281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AGVTGKSGL_	ENSG00000205592|ENST00000454784|MUC19;nc|ENSG00000205592|Q7Z5P9-2|MUC19	26.79610172149135	0.34227917631780574	6				NaN	NaN	0	NaN	1109	2364	3469
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3476	14.193	NaN	1646.4	30	0	721	0.142	+			13675	GPDKLFDSHK	10	34	381.86332124462274	1142.5681343340682	3	381.8631896972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GPDKLFDSHK_	ENSG00000142623|ENST00000375471|PADI1	26.063383197487333	0.6669871633831898	6				NaN	NaN	0	NaN	1110	2364	3469
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3494	14.233	NaN	2633.1	30	0	371.19	0.214	+			43292	TFLLVGMPGL	10	36	349.8695068359375	NaN	0	349.8695068359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TFLLVGMPGL_	ENSG00000176922|ENST00000322101|OR51S1;OR51S1|p.T247Pfs*16|1|0.4|ENSG00000176922|chr11:4848470-4848470|T/-|frameshift_variant	22.579656572578934	0.4201028297492154	6				NaN	NaN	0	NaN	1125	2367	3493
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3495	14.236	NaN	2796.2	30	0	439.83	0.106			+	12251	GATLPLPLQK	10	40	346.5490179048711	NaN	0	346.5489807128906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GATLPLPLQK_	REV__ENST00000561069.5_1_15:29409547-29409850:+|nuORF	36.446750945000026	0.3805027428805705	6				NaN	NaN	0	NaN	1126	2367	3493
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3496	14.238	NaN	15735	30	0	1785.9	0.106	+			32159	QSQAEIRK	8	85	480.26712467851075	958.5196964238215	2	480.2667541503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QSQAEIRK_	ENSG00000089876|ENST00000284690|DHX32;nc|ENSG00000089876|Q7L7V1-2|DHX32	96.19043198914106	0.25873003980794995	6				NaN	NaN	0	NaN	1127	2367	3493
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3497	14.24	NaN	16852	30	0	2256.9	0.106				-1	AGCSIVESQK	10	67	360.1780498003599	1077.5123200012797	3	360.1780090332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_AGC(Carbamidomethyl (C))SIVESQK_	ETV3|p.K10Sfs*76|1|0.33|ENSG00000117036|chr1:157136324-157136324|T/-|frameshift_variant	33.921630207806714	0.6028135429846169	6				NaN	NaN	0	NaN	1128	2367	3493
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3498	14.242	NaN	1006.8	30	0	352.52	0.106	+			33833	RRAAHVKSL	9	37	519.3200073242188	NaN	0	519.3200073242188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RRAAHVKSL_	ENST00000531571.5_1_11:102933090-102962381:-|nuORF	25.125986553469783	0.3507112406247533	6				NaN	NaN	0	NaN	1129	2367	3493
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3499	14.244	NaN	3407.4	30	0	591.13	0.036			+	13913	GRLGSGVPVAR	11	52	356.88046929288953	1067.6195784788686	3	356.88043212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GRLGSGVPVAR_	REV__ENSG00000043514|ENST00000316891|TRIT1;REV__nc|ENSG00000043514|Q9H3H1-4|TRIT1;REV__nc|ENSG00000043514|Q9H3H1-5|TRIT1;REV__TRIT1|p.L334*|1|0.3|ENSG00000043514|chr1:39847225-39847225|A/-|frameshift_variant	28.081489160057373	0.6952392775027776	6				NaN	NaN	0	NaN	1130	2367	3493
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3500	14.244	NaN	1781.9	30	0	491.62	0.142	+			25054	LLKNIKDKK	9	39	367.24456787109375	NaN	0	367.24456787109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LLKNIKDKK_	tr|U7STC4|U7STC4_FUSNUPhosphoribosylformylglycinamidinesynthaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01008PE=4SV=1	31.529811441608018	0.3183796599642538	6				NaN	NaN	0	NaN	1131	2367	3493
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3518	14.284	NaN	24429	30	0	3880	0.214	+			35595	SAYRQPVKK	9	74	538.8142579799344	1075.6139630266687	2	538.814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAYRQPVKK_	ENST00000473871.1_1_13:37583848-37586479:-|nuORF;nc|ENSG00000102710|Q8NEM7-2|SUPT20H;nc|ENSG00000102710|Q8NEM7-3|SUPT20H	114.85826248499774	0.024312442104607014	6				NaN	NaN	0	NaN	1146	2370	3517
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3519	14.287	NaN	37182	30	0	12561	0.106	+			35596	SAYRQPVKK	9	77	359.5451650162066	1075.61366564882	3	359.5451354980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAYRQPVKK_	ENST00000473871.1_1_13:37583848-37586479:-|nuORF;nc|ENSG00000102710|Q8NEM7-2|SUPT20H;nc|ENSG00000102710|Q8NEM7-3|SUPT20H	80.45461616416974	0.09558281504443908	6				NaN	NaN	0	NaN	1147	2370	3517
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3520	14.29	NaN	1618.4	30	0	256.03	0.106			+	20333	KEREVIIS	8	51	487.2876268785392	972.5607008238784	2	487.7848205566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEREVIIS_	REV__tr|U7SKV4|U7SKV4_FUSNUPolysaccharidechainlengthdeterminantN-terminaldomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01945PE=4SV=1	42.396135135203025	0.6414440140393314	6				NaN	NaN	0	NaN	1148	2370	3517
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3521	14.291	NaN	904.83	30	0	98.697	0.106	+			16238	HEEESGGRSV	10	37	543.7447509765625	NaN	0	543.7447509765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HEEESGGRSV_	ENSG00000047410|ENST00000367478|TPR	66.96192283764107	0.17742606645642828	6				NaN	NaN	0	NaN	1149	2370	3517
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3522	14.293	NaN	3419.3	30	0	269.6	0.106			+	37461	SLITELAPSLN	11	35	386.5508790113169	NaN	0	386.5508728027344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SLITELAPSLN_	REV__ENST00000431802.5_1_2:219525993-219526154:+|nuORF	28.5767321226876	0.4380616241468488	6				NaN	NaN	0	NaN	1150	2370	3517
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3523	14.295	NaN	13807	30	0	1523.3	0.034	+			40253	STSHVSVSK	9	77	466.2462234060271	930.4778938788543	2	466.2453918457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STSHVSVSK_	ENSG00000215182|ENST00000621226|MUC5AC;ENSG00000215182|ENST00000621226|MUC5AC;MUC5AC|p.R4729Efs*5|1|0.24|ENSG00000215182|chr11:1192325-1192325|C/-|frameshift_variant;MUC5AC|p.R4729Efs*5|1|0.24|ENSG00000215182|chr11:1192325-1192325|C/-|frameshift_variant	112.10723106719422	0.02684780151337622	6				NaN	NaN	0	NaN	1151	2370	3517
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3524	14.296	NaN	3991.6	30	0	1148.2	0.14	+			36897	SIHGRPVTK	9	60	497.793592253182	993.572631573164	2	497.79302978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SIHGRPVTK_	ENSG00000138640|ENST00000264344|FAM13A;ENST00000508360.5_1_4:89653076-89671014:-|nuORF;ENST00000511573.5_1_4:89649686-89680064:-|nuORF;FAM13A|p.E827K|1|0.28|ENSG00000138640|chr4:88739113-88739113|C/T|missense_variant;nc|ENSG00000138640|O94988-1|FAM13A;nc|ENSG00000138640|O94988-3|FAM13A;nc|ENSG00000138640|O94988-5|FAM13A;nc|ENSG00000138640|O94988-6|FAM13A	88.17693792209575	0.07000514020414955	6				NaN	NaN	0	NaN	1152	2370	3517
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3542	14.335	NaN	61837	30	0	16509	0.214	+			39740	STISSNASK	9	81	447.7298798901223	893.4452068470446	2	448.24005126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STISSNASK_	ENSG00000101166|ENST00000355937|PRELID3B;nc|ENSG00000101166|Q9Y3B1-2|PRELID3B	59.93077597824379	0.21419174904018318	6				NaN	NaN	0	NaN	1167	2373	3541
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3543	14.338	NaN	3555.3	30	0	811.39	0.106	+			22174	KSSKPIMEK	9	52	524.2969103924761	1046.579267851752	2	524.2978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KSSKPIMEK_	ENSG00000114315|ENST00000232424|HES1;ENST00000476918.1_1_3:193854169-193854699:+|nuORF;HES1|p.L54Efs*15|1|0.25|ENSG00000114315|chr3:194136667-194136668|TC/-|frameshift_variant	79.48907831485694	0.09975780661107167	6				NaN	NaN	0	NaN	1168	2373	3541
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3544	14.34	NaN	5290.5	30	0	1757.2	0.106	+			12362	GDQGWQVKPLG	11	44	395.53912353515625	NaN	0	395.53912353515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GDQGWQVKPLG_	ENST00000456916.5_1_16:57662548-57684184:+|nuORF;ENST00000567154.5_1_16:57662548-57684203:+|nuORF	37.50817390946774	0.39825797133360086	6				NaN	NaN	0	NaN	1169	2373	3541
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3545	14.342	NaN	1860.7	30	0	282.62	0.106	+			49071	VVKKIETRDGK	11	53	424.92638343149605	NaN	0	424.92620849609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVKKIETRDGK_	CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	41.080066990542036	0.3793850210388171	6				NaN	NaN	0	NaN	1170	2373	3541
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3546	14.344	NaN	2096.3	30	0	264.8	0.106	+			35113	SAGKVTQAL	9	56	437.753299620425	873.4920463076501	2	437.7589111328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SAGKVTQAL_	ENST00000444100.2_1_2:61244714-61244768:+|nuORF	32.81241826257853	0.4965981579233955	6				NaN	NaN	0	NaN	1171	2373	3541
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3547	14.346	NaN	2624.4	30	0	441.17	0.035	+			22008	KSGAQKKKK	9	52	501.8252967339377	1001.6360405346754	2	501.8253479003906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KSGAQKKKK_	CCDC153|p.K10N|1|0.43|ENSG00000248712|chr11:119195458-119195458|C/A|missense_variant;ENSG00000248712|ENST00000503566|CCDC153;ENST00000375140.7_1_11:119064239-119066706:-|nuORF	37.81151784470057	0.4459294069877048	6				NaN	NaN	0	NaN	1172	2373	3541
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3548	14.346	NaN	670.82	30	0	166.07	0.141	+			32049	QRSVRVVQP	9	28	534.8174038659954	1067.6202547987907	2	535.319091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QRSVRVVQP_	ENST00000591390.1_1_19:640215-640473:+|nuORF	20.94693142431847	0.6074874384046576	6				NaN	NaN	0	NaN	1173	2373	3541
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3566	14.385	NaN	78345	30	0	22259	0.16	+			39741	STISSNASK	9	72	447.7298798901223	893.4452068470446	2	447.7295837402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STISSNASK_	ENSG00000101166|ENST00000355937|PRELID3B;nc|ENSG00000101166|Q9Y3B1-2|PRELID3B	143.37361013837676	0.008897369944672323	6				NaN	NaN	0	NaN	1188	2376	3565
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3567	14.388	NaN	6178	30	0	813.9	0.106	+			6177	AVQKKTFTK	9	67	525.8192749023438	NaN	0	525.8192749023438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVQKKTFTK_	ENSG00000115306|ENST00000356805|SPTBN1;ENSG00000160460|ENST00000598249|SPTBN4;ENSG00000173898|ENST00000533211|SPTBN2;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1;nc|ENSG00000160460|Q9H254-2|SPTBN4;nc|ENSG00000160460|Q9H254-4|SPTBN4;nc|ENSG00000173898|O15020-2|SPTBN2;SPTBN1|p.K503Rfs*24|1|0.06|ENSG00000115306|chr2:54626095-54626095|G/-|frameshift_variant;SPTBN2|p.P924Qfs*35|1|0.39|ENSG00000173898|chr11:66701629-66701629|G/-|frameshift_variant	125.71293069911285	0.001249134308510144	6				NaN	NaN	0	NaN	1189	2376	3565
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3568	14.39	NaN	2210.8	30	0	520.29	0.106	+			12515	GEESYDLKD	9	51	528.2286044834983	1054.4426560337965	2	528.2291870117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEESYDLKD_	SERPINB3|p.V289G|1|0.69|ENSG00000057149|chr18:63655964-63655964|A/C|missense_variant	47.657333605630114	0.33044192980041115	6				NaN	NaN	0	NaN	1190	2376	3565
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3569	14.392	NaN	9505	30	0	665.88	0.106	+			42749	TDLVRGTL	8	77	437.753299620425	873.4920463076501	2	437.7530212402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TDLVRGTL_	ENSG00000100359|ENST00000248929|SGSM3;ENST00000470518.5_1_22:40803281-40805023:+|nuORF;ENST00000478085.5_1_22:40803992-40804918:+|nuORF;nc|ENSG00000100359|Q96HU1-2|SGSM3	90.77665401227738	0.27511901818546464	6				NaN	NaN	0	NaN	1191	2376	3565
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3570	14.393	NaN	3636.9	30	0	967.24	0.106	+			21942	KSADPLKSK	9	59	487.2876268785392	972.5607008238784	2	487.2873229980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KSADPLKSK_	CAPN7|p.K253Nfs*21|1|0.35|ENSG00000131375|chr3:15227870-15227870|A/-|frameshift_variant;ENSG00000131375|ENST00000253693|CAPN7;ENST00000457023.1_1_3:15247773-15262489:+|nuORF	101.45984612302182	0.0377122763612125	6				NaN	NaN	0	NaN	1192	2376	3565
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3571	14.395	NaN	1871.6	30	0	289.14	0.106			+	29453	PCLSHIKEQL	10	38	389.87890625	NaN	0	389.87890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PCLSHIKEQL_	REV__ENST00000581549.1_1_17:70599690-70599849:-|nuORF	39.252832667884924	0.37128895876774715	6				NaN	NaN	0	NaN	1193	2376	3565
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3572	14.397	NaN	2183.9	30	0	328.45	0.035	+			22009	KSGAQKKKK	9	52	501.8252967339377	1001.6360405346754	2	501.8246154785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KSGAQKKKK_	CCDC153|p.K10N|1|0.43|ENSG00000248712|chr11:119195458-119195458|C/A|missense_variant;ENSG00000248712|ENST00000503566|CCDC153;ENST00000375140.7_1_11:119064239-119066706:-|nuORF	42.86426827375447	0.38666266728046506	6				NaN	NaN	0	NaN	1194	2376	3565
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3590	14.433	NaN	5549.3	30	0	2609.5	0.214	+			20070	KEKERRVA	8	62	508.30354551957424	1014.5925381059485	2	508.3036804199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEKERRVA_	nc|ENSG00000125741|Q9H6K4-2|OPA3	35.61828744233558	0.6843154725607303	6				NaN	NaN	0	NaN	1209	2379	3589
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3591	14.437	NaN	2333.5	30	0	513.99	0.106			+	22224	KSVVHRCQ	8	56	478.7577719295882	NaN	0	478.7579040527344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KSVVHRCQ_	REV__ENSG00000061492|ENST00000506684|WNT8A;REV__nc|ENSG00000061492|Q9H1J5-2|WNT8A;REV__nc|ENSG00000061492|Q9H1J5|WNT8A	44.116797842482775	1.7418937515398478	6				NaN	NaN	0	NaN	1210	2379	3589
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3592	14.439	NaN	1144.9	30	0	398.4	0.106	+			38503	SSATTVTSK	9	42	441.231689453125	NaN	0	441.231689453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSATTVTSK_	ENSG00000120733|ENST00000314358|KDM3B;KDM3B|p.P1317Rfs*10|1|0.45|ENSG00000120733|chr5:138420936-138420936|C/-|frameshift_variant;nc|ENSG00000120733|Q7LBC6-2|KDM3B	58.22992032128504	0.15686832049467786	6				NaN	NaN	0	NaN	1211	2379	3589
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3593	14.441	NaN	2133.8	30	0	463.17	0.106	+			8493	EASRELLIP	9	62	514.2925415039062	NaN	0	514.2925415039062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EASRELLIP_	IGSF9B|p.G435S|1|0.24|ENSG00000080854|chr11:133931518-133931518|C/T|missense_variant	42.86426827375447	0.2558691296974908	6				NaN	NaN	0	NaN	1212	2379	3589
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3594	14.443	NaN	6402.3	30	0	1867.8	0.106	+			7476	DGASWNRK	8	52	467.22976438661425	932.4449758400285	2	467.2295227050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DGASWNRK_	ENSG00000118997|ENST00000312428|DNAH7;nc|ENSG00000118997|Q8WXX0-2|DNAH7	68.484700416344	0.4195245774506064	6				NaN	NaN	0	NaN	1213	2379	3589
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3595	14.445	NaN	4717.9	30	0	449.43	0.035	+			32786	RASHPIVQK	9	66	518.3059064891811	1034.597260045162	2	518.3062133789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RASHPIVQK_	ENSG00000112159|ENST00000369393|MDN1;MDN1|p.E2692*|2|0.32|ENSG00000112159|chr6:89706133-89706134|-/A|frameshift_variant;MDN1|p.F2691Lfs*7|2|0.37|ENSG00000112159|chr6:89706134-89706134|A/-|frameshift_variant;MDN1|p.K2642Nfs*17|2|0.29|ENSG00000112159|chr6:89707449-89707449|T/-|frameshift_variant;MDN1|p.L4077Cfs*15|1|0.16|ENSG00000112159|chr6:89680625-89680625|G/-|frameshift_variant;MDN1|p.L5278Ffs*6|1|0.18|ENSG00000112159|chr6:89652273-89652274|-/A|frameshift_variant	80.45461616416974	0.09558281504443908	6				NaN	NaN	0	NaN	1214	2379	3589
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3596	14.445	NaN	1602.7	30	0	198.17	0.139	+			20149	KEKPTGPPA	9	47	462.76106401714657	923.5075751010932	2	462.76092529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KEKPTGPPA_	ENSG00000204472|ENST00000376059|AIF1;nc|ENSG00000204472|P55008-2|AIF1	115.49404669440601	0.023927554121326553	6				NaN	NaN	0	NaN	1215	2379	3589
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3614	14.484	NaN	1241	30	0	59.096	0.214			+	-1	MKRISPCL	8	56	482.2593168158795	962.504080698559	2	482.2590026855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))KRISPCL_	REV__ENSG00000163840|ENST00000296161|DTX3L	27.882242232435846	0.7440473649773525	6				NaN	NaN	0	NaN	1230	2382	3613
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3615	14.488	NaN	7550.6	30	0	2581.8	0.106			+	19597	KDERKKVV	8	67	501.3089485705304	1000.6033442078608	2	501.30841064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KDERKKVV_	REV__tr|U7T2M7|U7T2M7_FUSNUGalactokinaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=galKPE=3SV=1	110.11987700582712	0.24509564897437786	6				NaN	NaN	0	NaN	1231	2382	3613
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3616	14.49	NaN	6225.4	30	0	1431.2	0.106	+			22021	KSGPVIAKR	9	60	478.30605856037465	954.5975641875493	2	478.3056335449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KSGPVIAKR_	ENSG00000109920|ENST00000263773|FNBP4;FNBP4|p.G931Efs*17|1|0.32|ENSG00000109920|chr11:47722991-47722991|T/-|frameshift_variant;FNBP4|p.K790Efs*7|1|0.34|ENSG00000109920|chr11:47724123-47724124|TT/-|frameshift_variant;FNBP4|p.P715Hfs*26|1|0.51|ENSG00000109920|chr11:47724643-47724643|G/-|frameshift_variant;FNBP4|p.W950Vfs*7|1|0.22|ENSG00000109920|chr11:47720045-47720046|-/T|frameshift_variant;nc|ENSG00000109920|Q8N3X1-2|FNBP4	112.41091882917199	0.026537921851008135	6				NaN	NaN	0	NaN	1232	2382	3613
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3617	14.492	NaN	13407	30	0	5894.5	0.106	+			7516	DGPTKTHKLE	10	56	375.8681264849623	1124.582550055087	3	375.867919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DGPTKTHKLE_	ENSG00000177283|ENST00000374694|FZD8	30.317721548370564	0.6322445173429027	6				NaN	NaN	0	NaN	1233	2382	3613
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3618	14.494	NaN	827.9	30	0	205.4	0.106			+	24672	LGVRTILTL	9	33	329.2183725532564	984.6332882599693	3	329.21124267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LGVRTILTL_	REV__ENSG00000123146|ENST00000242786|ADGRE5;REV__nc|ENSG00000123146|P48960-2|ADGRE5;REV__nc|ENSG00000123146|P48960-3|ADGRE5	19.359975847455235	0.6112419832031293	6				NaN	NaN	0	NaN	1234	2382	3613
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3619	14.496	NaN	786.51	30	0	97.508	0.035	+			48430	VTKHWQVQ	8	44	513.2811889648438	NaN	0	513.2811889648438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTKHWQVQ_	ENSG00000160410|ENST00000291842|SHKBP1;SHKBP1|p.S624Ifs*31|1|0.32|ENSG00000160410|chr19:40590830-40590831|-/A|frameshift_variant	44.116797842482775	1.7418937515398478	6				NaN	NaN	0	NaN	1235	2382	3613
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3620	14.496	NaN	932.96	30	0	153.63	0.138			+	38630	SSHEKGVP	8	30	420.71429494930914	NaN	0	420.7143249511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSHEKGVP_	REV__ENSG00000120332|ENST00000239462|TNN	18.324413293986947	1.7418937515398478	6				NaN	NaN	0	NaN	1236	2382	3613
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3638	14.535	NaN	9858	30	0	1739.9	0.214			+	22038	KSIGRMTPE	9	64	509.7710747915469	1017.5275966498938	2	509.77130126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSIGRMTPE_	REV__ENST00000309170.7_1_3:150996115-150996145:-|nuORF	89.02883481214508	0.06760336634167786	6				NaN	NaN	0	NaN	1251	2385	3637
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3639	14.538	NaN	3980.5	30	0	1251.2	0.106	+			1726	AHEVELQR	8	56	491.25938939518534	980.5042258571707	2	491.2591552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AHEVELQR_	ENSG00000105373|ENST00000246802|NOP53;ENST00000565166.2_1_15:95399162-95399906:+|nuORF;ENST00000598681.5_1_19:48248882-48259836:+|nuORF	38.80614096846853	0.6637206697844082	6				NaN	NaN	0	NaN	1252	2385	3637
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3640	14.54	NaN	17516	30	0	15915	0.106			+	8858	EEQIINVKVE	10	33	400.88631253425893	1199.6371082029768	3	400.8861389160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EEQIINVKVE_	REV__ENSG00000166938|ENST00000319212|DIS3L;REV__nc|ENSG00000166938|Q8TF46-2|DIS3L;REV__nc|ENSG00000166938|Q8TF46-4|DIS3L	14.864876125193954	0.7409144161711139	6				NaN	NaN	0	NaN	1253	2385	3637
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3641	14.542	NaN	4334.1	30	0	1157	0.106			+	3878	ATAPSPAAAA	10	58	414.2170700471014	826.4195871610028	2	414.2163391113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATAPSPAAAA_	REV__ENSG00000126016|ENST00000371959|AMOT;REV__nc|ENSG00000126016|Q4VCS5-2|AMOT	54.776311868738084	0.41334902933431344	6				NaN	NaN	0	NaN	1254	2385	3637
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3642	14.544	NaN	4188.8	30	0	1902.8	0.106			+	-1	SLKVRMPSD	9	54	350.1854328927586	NaN	0	350.1853942871094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_SLKVRM(Oxidation (M))PSD_	REV__ENSG00000132549|ENST00000357162|VPS13B;REV__nc|ENSG00000132549|Q7Z7G8-6|VPS13B;REV__nc|ENSG00000132549|Q7Z7G8|VPS13B;REV__VPS13B|p.M3156Ifs*2|1|0.07|ENSG00000132549|chr8:99832427-99832428|-/TA|frameshift_variant;REV__VPS13B|p.S3988Lfs*4|1|0.55|ENSG00000132549|chr8:99875552-99875553|-/C|frameshift_variant;REV__VPS13B|p.S3988Pfs*25|1|0.11|ENSG00000132549|chr8:99875553-99875553|C/-|frameshift_variant	36.446750945000026	0.29355505452396785	6				NaN	NaN	0	NaN	1255	2385	3637
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3643	14.546	NaN	5669.8	30	0	1033.9	0.106	+			23138	KVVVSPTKK	9	59	493.32410765146244	984.6336623697249	2	493.3236389160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KVVVSPTKK_	ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232323706-232327997:-|nuORF	129.42129120953632	0.01549634589885217	6				NaN	NaN	0	NaN	1256	2385	3637
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3644	14.547	NaN	1109.1	30	0	157.51	0.034			+	47500	VQHVLPVGP	9	51	473.2786633502774	NaN	0	473.27740478515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VQHVLPVGP_	REV__COL26A1|p.S218Lfs*131|1|0.12|ENSG00000160963|chr7:101544035-101544035|C/-|frameshift_variant	26.79610172149135	0.34227917631780574	6				NaN	NaN	0	NaN	1257	2385	3637
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3662	14.585	NaN	55884	30	0	9002.8	0.214	+			20044	KEKAKETAL	9	91	509.30072645692627	1016.5868999806526	2	509.3006896972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEKAKETAL_	ENSG00000169230|ENST00000303204|PRELID1;ENST00000503853.1_1_5:176733373-176733568:+|nuORF;ENST00000567272.1_1_6:126965256-126965442:+|nuORF;nc|ENSG00000169230|Q9Y255-2|PRELID1	112.10723106719422	0.02684780151337622	6				NaN	NaN	0	NaN	1272	2388	3661
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3663	14.589	NaN	32335	30	0	11278	0.106	+			23139	KVVVSPTKK	9	76	329.2183725532564	984.6332882599693	3	329.21826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVVVSPTKK_	ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232323706-232327997:-|nuORF	53.08895987439943	0.27122541748218487	6				NaN	NaN	0	NaN	1273	2388	3661
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3664	14.591	NaN	23896	30	0	7780.2	0.106			+	-1	SIANAGGAMYL	11	59	361.8438131639617	1082.5096100920853	3	361.8439025878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_SIANAGGAM(Oxidation (M))YL_	REV__MLT1A1_dup678|chr2:84835716-84835963:-|1.0766326220206477|0.0336665895774405|5.0|478.0|17|3|anti-sense	34.08650109265054	0.6322515996262609	6				NaN	NaN	0	NaN	1274	2388	3661
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3665	14.593	NaN	2172.8	30	0	734.31	0.106			+	-1	LSLYNQSCKI	10	46	409.2142333984375	NaN	0	409.2142333984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_LSLYNQSC(Carbamidomethyl (C))KI_	REV__AKAP6|p.E1418Kfs*19|1|0.26|ENSG00000151320|chr14:32822061-32822061|G/-|frameshift_variant;REV__AKAP6|p.N1585Mfs*12|1|0.25|ENSG00000151320|chr14:32822563-32822563|A/-|frameshift_variant;REV__AKAP6|p.R392Efs*14|1|0.3|ENSG00000151320|chr14:32545823-32545823|A/-|frameshift_variant;REV__ENSG00000151320|ENST00000280979|AKAP6;REV__nc|ENSG00000151320|Q13023-2|AKAP6	33.921630207806714	0.38879399011744475	6				NaN	NaN	0	NaN	1275	2388	3661
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3666	14.594	NaN	5413.3	30	0	698.83	0.106			+	25781	LSANHQIA	8	58	427.2299649134322	852.4453768936644	2	427.2298278808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSANHQIA_	REV__ENSG00000158636|ENST00000695367|EMSY;REV__ENST00000427574.6_1_11:76157982-76207767:+|nuORF;REV__ENST00000528826.1_1_11:76157982-76169407:+|nuORF;REV__nc|ENSG00000158636|Q7Z589-2|EMSY;REV__nc|ENSG00000158636|Q7Z589-4|EMSY;REV__nc|ENSG00000158636|Q7Z589-5|EMSY;REV__nc|ENSG00000158636|Q7Z589-6|EMSY;REV__nc|ENSG00000158636|Q7Z589|EMSY	73.97473282117947	0.3737790450121076	6				NaN	NaN	0	NaN	1276	2388	3661
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3667	14.596	NaN	28679	30	0	12741	0.032	+			12903	GESGAGKTV	9	79	403.20637622387295	804.3981995145459	2	403.20599365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GESGAGKTV_	ENSG00000006788|ENST00000252172|MYH13;ENSG00000078814|ENST00000262873|MYH7B;ENSG00000092054|ENST00000355349|MYH7;ENSG00000109061|ENST00000226207|MYH1;ENSG00000109063|ENST00000583535|MYH3;ENSG00000125414|ENST00000245503|MYH2;ENSG00000128833|ENST00000261839|MYO5C;ENSG00000133020|ENST00000403437|MYH8;ENSG00000142347|ENST00000644032|MYO1F;ENSG00000144821|ENST00000693548|MYH15;ENSG00000157483|ENST00000288235|MYO1E;ENSG00000167306|ENST00000285039|MYO5B;ENSG00000197535|ENST00000399233|MYO5A;ENSG00000197616|ENST00000405093|MYH6;ENSG00000264424|ENST00000255381|MYH4;ENST00000541028.5_1_15:52553308-52587917:-|nuORF;ENST00000557461.1_1_14:23869380-23876432:-|nuORF;ENST00000558902.5_1_15:52548900-52571163:-|nuORF;ENST00000561810.1_1_15:52708302-52718136:-|nuORF;ENST00000594774.5_1_19:8618146-8642307:-|nuORF;ENST00000594977.5_1_19:8612968-8642307:-|nuORF;ENST00000595325.5_1_19:8616850-8642307:-|nuORF;ENST00000598529.5_1_19:8616563-8619410:-|nuORF;MYH1|p.L229Pfs*14|1|0.19|ENSG00000109061|chr17:10513876-10513877|-/G|frameshift_variant;MYH1|p.N889Mfs*24|1|0.19|ENSG00000109061|chr17:10504835-10504835|T/-|frameshift_variant;MYH13|p.K1396Nfs*37|1|0.46|ENSG00000006788|chr17:10312751-10312751|T/-|frameshift_variant;MYH15|p.E1364Vfs*7|1|0.04|ENSG00000144821|chr3:108414346-108414347|-/GGAGTTA|frameshift_variant;MYH15|p.F777Lfs*12|1|0.26|ENSG00000144821|chr3:108454134-108454134|A/-|frameshift_variant;MYH15|p.T1279Ifs*7|1|0.04|ENSG00000144821|chr3:108421141-108421142|-/ATAA|frameshift_variant;MYH2|p.R876Gfs*9|1|0.36|ENSG00000125414|chr17:10531704-10531704|T/-|frameshift_variant;MYH4|p.N981Tfs*16|1|0.12|ENSG00000264424|chr17:10453321-10453321|T/-|frameshift_variant;MYH4|p.Q222Hfs*6|1|0.02|ENSG00000264424|chr17:10463626-10463627|-/G|frameshift_variant;MYH7|p.I1207Tfs*26|1|0.04|ENSG00000092054|chr14:23419951-23419952|-/TGTAGTG|frameshift_variant;MYH8|p.E1123Gfs*19|1|0.39|ENSG00000133020|chr17:10400757-10400758|-/C|frameshift_variant;MYH8|p.I922Nfs*6|1|0.33|ENSG00000133020|chr17:10401709-10401710|-/T|frameshift_variant;MYH8|p.K1582Nfs*3|1|0.04|ENSG00000133020|chr17:10395349-10395350|-/G|frameshift_variant;MYH8|p.N600Ifs*5|1|0.32|ENSG00000133020|chr17:10409377-10409377|T/-|frameshift_variant;MYO1F|p.L967Cfs*94|1|0.31|ENSG00000142347|chr19:8522785-8522785|G/-|frameshift_variant;MYO1F|p.N396Kfs*13|1|0.44|ENSG00000142347|chr19:8548117-8548118|-/T|frameshift_variant;MYO5A|p.I1440Nfs*19|1|0.44|ENSG00000197535|chr15:52336477-52336478|-/T|frameshift_variant;MYO5B|p.Y287Lfs*17|1|0.31|ENSG00000167306|chr18:49984806-49984807|-/A|frameshift_variant;MYO5C|p.E1050Sfs*8|1|0.32|ENSG00000128833|chr15:52229192-52229192|C/-|frameshift_variant;MYO5C|p.I480Nfs*10|1|0.5|ENSG00000128833|chr15:52253414-52253415|-/T|frameshift_variant;MYO5C|p.L1151Wfs*19|1|0.17|ENSG00000128833|chr15:52223719-52223719|A/-|frameshift_variant;MYO5C|p.L933Hfs*33|1|0.04|ENSG00000128833|chr15:52237552-52237553|-/T|frameshift_variant;MYO5C|p.L933Sfs*35|1|0.04|ENSG00000128833|chr15:52237553-52237554|-/AAGTGGA|frameshift_variant;nc|ENSG00000078814|A7E2Y1|MYH7B;nc|ENSG00000125414|Q9UKX2-2|MYH2;nc|ENSG00000128833|Q9NQX4-2|MYO5C;nc|ENSG00000197535|Q9Y4I1-2|MYO5A;nc|ENSG00000197535|Q9Y4I1|MYO5A	110.11987700582712	0.028875675806141952	6				NaN	NaN	0	NaN	1277	2388	3661
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3668	14.597	NaN	2006.1	30	0	634.49	0.142				-1	ATAMDWFIAV	10	35	380.8512268066406	NaN	0	380.8512268066406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_ATAM(Oxidation (M))DWFIAV_	ENSG00000011677|ENST00000370314|GABRA3;ENSG00000022355|ENST00000393943|GABRA1;ENSG00000109158|ENST00000264318|GABRA4;ENSG00000145863|ENST00000274545|GABRA6;ENSG00000151834|ENST00000381620|GABRA2;ENSG00000186297|ENST00000335625|GABRA5;ENST00000497894.1_1_X:151355814-151358393:-|nuORF;GABRA1|p.P402Tfs*9|1|0.29|ENSG00000022355|chr5:161897251-161897261|CAAGCCCGAAA/-|frameshift_variant;GABRA1|p.Y309F|1|0.54|ENSG00000022355|chr5:161895735-161895735|A/T|missense_variant;GABRA5|p.A356Pfs*15|1|0.24|ENSG00000186297|chr15:26943397-26943397|A/-|frameshift_variant;nc|ENSG00000151834|P47869-2|GABRA2	22.579656572578934	0.4201028297492154	6				NaN	NaN	0	NaN	1278	2388	3661
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3686	14.636	NaN	6156.4	30	0	1671.3	0.214			+	1161	AENFIHAAK	9	32	334.1796510995789	999.5171238989367	3	334.1797180175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AENFIHAAK_	REV__ENSG00000128641|ENST00000392318|MYO1B;REV__MYO1B|p.F948Cfs*47|1|0.41|ENSG00000128641|chr2:191411140-191411141|-/TG|frameshift_variant;REV__MYO1B|p.S730Afs*4|2|0.4|ENSG00000128641|chr2:191393178-191393178|A/-|frameshift_variant;REV__nc|ENSG00000128641|O43795-2|MYO1B	24.20275056022122	0.577060078256802	6				NaN	NaN	0	NaN	1293	2391	3685
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3687	14.64	NaN	8920.8	30	0	2394.7	0.106	+			40345	STTNQSISK	9	65	483.24895297436115	964.4833530155223	2	483.2485656738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STTNQSISK_	EDEM3|p.F658Lfs*4|1|0.35|ENSG00000116406|chr1:184708216-184708216|A/-|frameshift_variant;ENSG00000116406|ENST00000318130|EDEM3;nc|ENSG00000116406|Q9BZQ6-2|EDEM3	154.0112374973812	0.005934173778894772	6				NaN	NaN	0	NaN	1294	2391	3685
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3688	14.642	NaN	6342.4	30	0	968.37	0.106	+			40605	SVAHSPPEK	9	65	476.2484128187423	950.4822727042846	2	476.2481994628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVAHSPPEK_	ENSG00000167173|ENST00000394987|C15orf39;nc|nan|Q6ZRI6-2|C15orf39	114.8945686534367	0.024290463251177924	6				NaN	NaN	0	NaN	1295	2391	3685
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3689	14.644	NaN	2991.4	30	0	793.91	0.106	+			48918	VVDNGSGMCK	10	50	513.2228381035377	1024.4311232738753	2	513.2232666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_VVDNGSGM(Oxidation (M))CK_	ACTBL2|p.R29Gfs*7|1|0.37|ENSG00000169067|chr5:57482623-57482623|G/-|frameshift_variant;ENSG00000075624|ENST00000646664|ACTB;ENSG00000169067|ENST00000423391|ACTBL2;ENST00000418351.1_1_15:44282253-44282364:-|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000477812.1_1_7:5569027-5569288:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF	102.0615471778698	0.07157459376830236	6				NaN	NaN	0	NaN	1296	2391	3685
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3690	14.645	NaN	5069.6	30	0	1785.6	0.106	+			44838	TTTATATPK	9	48	446.24290522783593	890.4712575224719	2	446.2427978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TTTATATPK_	ENST00000262126.8_1_18:9136811-9136937:+|nuORF	77.31757898189308	0.1091473830098891	6				NaN	NaN	0	NaN	1297	2391	3685
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3691	14.647	NaN	3621	30	0	968.11	0.034	+			22185	KSSTPVPSK	9	53	465.76656782636945	929.5185827195389	2	465.7666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KSSTPVPSK_	ECT2|p.K832Rfs*25|1|0.1|ENSG00000114346|chr3:172815693-172815693|A/-|frameshift_variant;ENSG00000114346|ENST00000392692|ECT2;nc|ENSG00000114346|Q9H8V3-2|ECT2;nc|ENSG00000114346|Q9H8V3-3|ECT2;nc|ENSG00000114346|Q9H8V3-4|ECT2	91.26522074875469	0.06129826844580791	6				NaN	NaN	0	NaN	1298	2391	3685
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3692	14.648	NaN	1585.6	30	0	360.03	0.141			+	31114	QFSRIAQSK	9	52	532.7964477539062	NaN	0	532.7964477539062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QFSRIAQSK_	REV__ENST00000511730.2_1_5:40716249-40756023:-|nuORF	51.52775601994872	0.19616436856719055	6				NaN	NaN	0	NaN	1299	2391	3685
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3710	14.687	NaN	13190	30	0	2996.8	0.214	+			12412	GEAKPRKTL	9	64	500.3007425824505	NaN	0	500.30078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEAKPRKTL_	ENSG00000099290|ENST00000282633|WASHC2A;ENSG00000172661|ENST00000623400|WASHC2C;nc|ENSG00000099290|Q641Q2-2|WASHC2A;nc|ENSG00000172661|Q9Y4E1-1|WASHC2C;nc|ENSG00000172661|Q9Y4E1-2|WASHC2C;nc|ENSG00000172661|Q9Y4E1-3|WASHC2C;nc|ENSG00000172661|Q9Y4E1-4|WASHC2C;nc|ENSG00000172661|Q9Y4E1-6|WASHC2C	70.8162118820467	0.10318768208603292	6				NaN	NaN	0	NaN	1314	2394	3709
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3711	14.691	NaN	3867.5	30	0	1006	0.106	+			22874	KVLDTPHHSK	10	51	387.8841592117117	1160.630648235335	3	387.8837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVLDTPHHSK_	ENST00000540664.5_1_10:98714714-98714867:+|nuORF	55.721020083383095	0.4047570224426313	6				NaN	NaN	0	NaN	1315	2394	3709
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3712	14.693	NaN	9098.1	30	0	1289.5	0.106	+			15996	HANDDKSSL	9	87	493.73039342101634	985.4462339088327	2	493.73004150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HANDDKSSL_	ENSG00000179889|ENST00000396410|PDXDC1;nc|ENSG00000179889|Q6P996-3|PDXDC1;nc|ENSG00000179889|Q6P996-4|PDXDC1;nc|ENSG00000179889|Q6P996-5|PDXDC1;PDXDC1|p.P706Tfs*3|1|0.06|ENSG00000179889|chr16:15036023-15036024|-/A|frameshift_variant	59.93077597824379	0.21419174904018318	6				NaN	NaN	0	NaN	1316	2394	3709
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3713	14.695	NaN	1348.3	30	0	182.32	0.106			+	22354	KTGTKNTY	8	55	456.7429652001533	911.4713774671067	2	456.74285888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTGTKNTY_	REV__ENST00000517831.5_1_8:86133134-86133284:+|nuORF	39.252832667884924	0.6609488554722044	6				NaN	NaN	0	NaN	1317	2394	3709
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3714	14.697	NaN	42304	30	0	15567	0.106	+			20550	KFNQTEEVSVE	11	89	437.2130135508069	1308.6172112526208	3	437.2129821777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KFNQTEEVSVE_	ENSG00000112659|ENST00000252050|CUL9;ENST00000502937.5_1_6:43174127-43181466:+|nuORF;ENST00000505172.5_1_6:43174127-43181391:+|nuORF;ENST00000515773.5_1_6:43164260-43192180:+|nuORF;nc|ENSG00000112659|Q8IWT3-3|CUL9	35.15202426646627	0.6210751305041943	6				NaN	NaN	0	NaN	1318	2394	3709
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3715	14.698	NaN	14134	30	0	4726.6	0.034			+	19748	KDVLARSH	8	69	463.26394938726907	924.5133458413382	2	463.2640380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KDVLARSH_	REV__ENSG00000166348|ENST00000687698|USP54;REV__ENST00000498143.5_1_10:75279553-75335416:-|nuORF;REV__nc|ENSG00000166348|Q70EL1-6|USP54;REV__nc|ENSG00000166348|Q70EL1-7|USP54	45.97224482568171	0.6192535143389125	6				NaN	NaN	0	NaN	1319	2394	3709
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3716	14.699	NaN	2511.5	30	0	739.13	0.137	+			822	AEGASLGPAA	10	53	422.21398922285994	842.4134255125199	2	422.21392822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AEGASLGPAA_	ENST00000294599.8_1_1:3407490-3411287:-|nuORF;ENST00000356575.8_1_1:3407490-3411251:-|nuORF;ENST00000494257.1_1_1:3407490-3409358:-|nuORF;MEGF6|p.A1440Hfs*78|2|0.41|ENSG00000162591|chr1:3493840-3493840|C/-|frameshift_variant	62.107414245175825	0.3466735403679669	6				NaN	NaN	0	NaN	1320	2394	3709
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3734	14.739	NaN	10006	30	0	1470.8	0.214	+			2825	ASAAGVQR	8	49	380.2091111842512	758.4036694353024	2	380.20892333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASAAGVQR_	nc|ENSG00000105993|O75190-3|DNAJB6	133.8126618989323	0.23527224284755519	6				NaN	NaN	0	NaN	1335	2397	3733
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3735	14.742	NaN	26580	30	0	5351.5	0.106	+			33039	REKDTVKKL	9	84	372.8960256642872	1115.6662475930616	3	372.8958740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_REKDTVKKL_	ENSG00000125844|ENST00000377813|RRBP1;nc|ENSG00000125844|Q9P2E9-3|RRBP1	81.52500206392136	0.09095445986635249	6				NaN	NaN	0	NaN	1336	2397	3733
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3736	14.744	NaN	3786.2	30	0	1107.2	0.106	+			48630	VTSKGAGLSK	10	53	474.27923583984375	NaN	0	474.27923583984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTSKGAGLSK_	ENSG00000136068|ENST00000295956|FLNB;ENST00000481470.5_1_3:58155276-58156486:+|nuORF;ENST00000484981.1_1_3:58151207-58156486:+|nuORF;nc|ENSG00000136068|O75369-2|FLNB;nc|ENSG00000136068|O75369-3|FLNB;nc|ENSG00000136068|O75369-6|FLNB;nc|ENSG00000136068|O75369-7|FLNB;nc|ENSG00000136068|O75369-8|FLNB;nc|ENSG00000136068|O75369-9|FLNB	89.02883481214508	0.05754025735153368	6				NaN	NaN	0	NaN	1337	2397	3733
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3737	14.746	NaN	5140.9	30	0	1245.5	0.106			+	19749	KDVLARSH	8	56	463.26394938726907	924.5133458413382	2	463.7562255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KDVLARSH_	REV__ENSG00000166348|ENST00000687698|USP54;REV__ENST00000498143.5_1_10:75279553-75335416:-|nuORF;REV__nc|ENSG00000166348|Q70EL1-6|USP54;REV__nc|ENSG00000166348|Q70EL1-7|USP54	58.22992032128504	0.519305013932957	6				NaN	NaN	0	NaN	1338	2397	3733
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3738	14.748	NaN	1751	30	0	553.85	0.106	+			16409	HERAKSTVM	9	49	529.7744643730063	NaN	0	529.7743530273438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HERAKSTVM_	ENSG00000095932|ENST00000215531|SMIM24	56.72105179125745	0.16330365735109603	6				NaN	NaN	0	NaN	1339	2397	3733
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3739	14.75	NaN	1205.6	30	0	147.4	0.035	+			25454	LPQGVHVGCP	10	47	503.7616512838211	NaN	0	503.7615966796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LPQGVHVGCP_	ENST00000595091.6_2_19:53837025-53844497:+|nuORF	42.86426827375447	0.3507156137006061	6				NaN	NaN	0	NaN	1340	2397	3733
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3740	14.75	NaN	2476.7	30	0	272.13	0.139			+	-1	KYKRCDGG	8	63	492.2398422636196	982.4651315940392	2	492.23968505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_KYKRC(Carbamidomethyl (C))DGG_	REV__ENST00000233057.8_1_2:37327811-37327883:-|nuORF	50.0245360154114	0.5941082100236891	6				NaN	NaN	0	NaN	1341	2397	3733
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3758	14.788	NaN	12888	30	0	2989.9	0.214	+			49344	VVSKSGSLK	9	63	452.7767133054509	903.5388736777019	2	452.7764587402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVSKSGSLK_	ENSG00000166197|ENST00000605788|NOLC1;ENST00000477977.1_1_10:103920762-103923575:+|nuORF;nc|ENSG00000166197|Q14978-2|NOLC1;nc|ENSG00000166197|Q14978-3|NOLC1	106.88024417677582	0.032181361622142884	6				NaN	NaN	0	NaN	1356	2400	3757
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3759	14.791	NaN	22551	30	0	2787	0.106	+			13998	GSDRDTLAK	9	66	481.7487282224258	961.4829035116517	2	481.7485046386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSDRDTLAK_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	68.84614121027924	0.14577793175421136	6				NaN	NaN	0	NaN	1357	2400	3757
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3760	14.793	NaN	7284.2	30	0	1094.5	0.106			+	32268	QTLQTQAVL	9	62	501.2856323438076	1000.5567117544152	2	501.2848205566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QTLQTQAVL_	REV__ENST00000465124.1_1_9:127634910-127635171:+|nuORF	66.42927471994793	0.16001998865088202	6				NaN	NaN	0	NaN	1358	2400	3757
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3761	14.795	NaN	60310	30	0	15819	0.106	+			38682	SSKAGFTTIYK	11	69	401.55051040905414	NaN	0	401.550537109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSKAGFTTIYK_	ENSG00000108231|ENST00000371418|LGI1;nc|ENSG00000108231|O95970-3|LGI1	77.53327743719008	0.0942589147427731	6				NaN	NaN	0	NaN	1359	2400	3757
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3762	14.797	NaN	14526	30	0	6893.6	0.106			+	49224	VVNDLNQILAE	11	59	409.8910593608662	1226.6513486827987	3	409.8909912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVNDLNQILAE_	REV__ENSG00000115677|ENST00000310931|HDLBP;REV__ENST00000479169.5_1_2:242177863-242181895:-|nuORF;REV__ENST00000487169.5_1_2:242174673-242189369:-|nuORF;REV__nc|ENSG00000115677|Q00341-2|HDLBP	30.568863376406313	0.6691487505135859	6				NaN	NaN	0	NaN	1360	2400	3757
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3763	14.799	NaN	2247.1	30	0	845.68	0.106	+			19230	KAAKPSVPK	9	59	463.2951247509969	924.5756965687938	2	463.29486083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KAAKPSVPK_	ENSG00000184897|ENST00000333762|H1-10	46.45678178249821	0.34452392205506005	6				NaN	NaN	0	NaN	1361	2400	3757
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3764	14.801	NaN	2085.4	30	0	358.62	0.034	+			4120	ATEEGQPPK	9	53	478.7377271315703	955.4609013299406	2	478.7373352050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATEEGQPPK_	ENSG00000187288|ENST00000336832|CIDEC;nc|ENSG00000187288|Q96AQ7-2|CIDEC;nc|ENSG00000187288|Q96AQ7-4|CIDEC	74.25504064058377	0.12238981753128622	6				NaN	NaN	0	NaN	1362	2400	3757
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3782	14.838	NaN	6347.7	30	0	868.83	0.214	+			30873	QEKDKLLAA	9	65	508.29282542204334	1014.5710979108867	2	508.29241943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QEKDKLLAA_	ENSG00000126777|ENST00000395314|KTN1;ENST00000554567.1_2_14:56046961-56101257:+|nuORF;KTN1|p.A1102Gfs*15|2|0.3|ENSG00000126777|chr14:55670756-55670757|-/A|frameshift_variant;KTN1|p.H994Sfs*2|1|0.35|ENSG00000126777|chr14:55659677-55659678|-/C|frameshift_variant;KTN1|p.K1078Nfs*12|1|0.3|ENSG00000126777|chr14:55667292-55667292|A/-|frameshift_variant;KTN1|p.K1101Rfs*18|1|0.4|ENSG00000126777|chr14:55670757-55670757|A/-|frameshift_variant;KTN1|p.M404*|1|0.09|ENSG00000126777|chr14:55630084-55630085|-/AT|frameshift_variant;KTN1|p.M404Ifs*12|1|0.09|ENSG00000126777|chr14:55630085-55630086|-/ATAAACA|frameshift_variant;KTN1|p.P993Lfs*6|1|0.36|ENSG00000126777|chr14:55659678-55659678|C/-|frameshift_variant;nc|ENSG00000126777|Q86UP2-2|KTN1;nc|ENSG00000126777|Q86UP2-3|KTN1;nc|ENSG00000126777|Q86UP2-4|KTN1	98.62937762414208	0.04060045538121712	6				NaN	NaN	0	NaN	1377	2403	3781
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3783	14.842	NaN	4284	30	0	547.8	0.106			+	34091	RSPVQTLI	8	58	457.27677240614344	912.5389918790869	2	458.25335693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RSPVQTLI_	REV__ZNF516|p.V1038Sfs*122|1|0.38|ENSG00000101493|chr18:76379003-76379003|G/-|frameshift_variant	29.14955571784316	0.7342621283720113	6				NaN	NaN	0	NaN	1378	2403	3781
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3784	14.844	NaN	5921.5	30	0	686.49	0.106			+	9964	EREQQKRLE	9	60	405.8859638184147	NaN	0	405.8859558105469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EREQQKRLE_	REV__ENSG00000154310|ENST00000436636|TNIK;REV__nc|ENSG00000154310|Q9UKE5-2|TNIK;REV__nc|ENSG00000154310|Q9UKE5-3|TNIK;REV__nc|ENSG00000154310|Q9UKE5-4|TNIK;REV__nc|ENSG00000154310|Q9UKE5-5|TNIK;REV__nc|ENSG00000154310|Q9UKE5-6|TNIK;REV__nc|ENSG00000154310|Q9UKE5-7|TNIK;REV__nc|ENSG00000154310|Q9UKE5-8|TNIK;REV__TNIK|p.E1253Kfs*13|1|0.04|ENSG00000154310|chr3:171066678-171066678|C/-|frameshift_variant;REV__TNIK|p.F1336Lfs*15|1|0.15|ENSG00000154310|chr3:171063956-171063956|A/-|frameshift_variant;REV__TNIK|p.S560Ifs*2|1|0.05|ENSG00000154310|chr3:171128809-171128810|-/T|frameshift_variant;REV__TNIK|p.V1263Cfs*3|1|0.42|ENSG00000154310|chr3:171066648-171066648|C/-|frameshift_variant	42.33807565288922	0.25949540651090086	6				NaN	NaN	0	NaN	1379	2403	3781
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3785	14.846	NaN	7172.4	30	0	747.86	0.106	+			16096	HDERQDSIN	9	76	557.2494065094935	1112.484260085787	2	557.2498779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HDERQDSIN_	ENSG00000153147|ENST00000283131|SMARCA5	66.42927471994793	0.16001998865088202	6				NaN	NaN	0	NaN	1380	2403	3781
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3786	14.847	NaN	8599.4	30	0	2548.3	0.106	+			40027	STMTSGQAR	9	55	469.7214574035312	937.4283618738624	2	469.72100830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STMTSGQAR_	ENSG00000106609|ENST00000341567|TMEM248;nc|ENSG00000106609|Q9NWD8-2|TMEM248	98.58198989935565	0.04066992115528678	6				NaN	NaN	0	NaN	1381	2403	3781
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3787	14.849	NaN	1619.6	30	0	275.43	0.035			+	21664	KQAELVTVGV	10	43	522.3093581902258	1042.6041634472515	2	522.31103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KQAELVTVGV_	REV__ENST00000325076.9_1_20:34190424-34191756:-|nuORF	42.396135135203025	0.5270658956260207	6				NaN	NaN	0	NaN	1382	2403	3781
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3805	14.887	NaN	9806.9	30	0	2206.2	0.214	+			48379	VTHHVSVTK	9	67	504.28532320077653	1006.5560934683531	2	504.2850341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTHHVSVTK_	ENSG00000164828|ENST00000401592|SUN1;ENST00000413171.6_1_7:892397-912965:+|nuORF;ENST00000475971.5_1_7:893033-912965:+|nuORF;nc|ENSG00000164828|O94901-5|SUN1;nc|ENSG00000164828|O94901-6|SUN1;nc|ENSG00000164828|O94901-9|SUN1;SUN1|p.E739Gfs*27|1|0.41|ENSG00000164828|chr7:872532-872533|-/G|frameshift_variant	143.37361013837676	0.008897369944672323	6				NaN	NaN	0	NaN	1397	2406	3804
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3806	14.891	NaN	6521.1	30	0	762	0.106			+	28	AAAKEAKKP	9	67	457.27677240614344	912.5389918790869	2	457.2765197753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAAKEAKKP_	REV__AFF4|p.R689Gfs*28|1|0.29|ENSG00000072364|chr5:132896566-132896566|A/-|frameshift_variant;REV__ENSG00000072364|ENST00000265343|AFF4;REV__nc|ENSG00000072364|Q9UHB7-2|AFF4	75.04331003522576	0.118981335847003	6				NaN	NaN	0	NaN	1398	2406	3804
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3807	14.893	NaN	11750	30	0	4604.5	0.106	+			19535	KAYKTVIKK	9	57	360.23744680888194	1077.6905110268458	3	360.2375793457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KAYKTVIKK_	ENSG00000013275|ENST00000157812|PSMC4;ENST00000593455.5_1_19:40486165-40487209:+|nuORF;nc|ENSG00000013275|P43686-2|PSMC4	47.657333605630114	0.33044192980041115	6				NaN	NaN	0	NaN	1399	2406	3804
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3808	14.894	NaN	743.61	30	0	50.083	0.106	+			13670	GNYPDLVKK	9	43	517.2855224609375	NaN	0	517.2855224609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GNYPDLVKK_	tr|U7SFN1|U7SFN1_FUSNUGlycerophosphoryldiesterphosphodiesteraseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02312PE=4SV=1	40.77816245573522	0.2702456086868081	6				NaN	NaN	0	NaN	1400	2406	3804
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3809	14.896	NaN	6336.5	30	0	658.41	0.106	+			36286	SEQKGKAAL	9	66	466.26409721037277	930.5136414875456	2	466.2637023925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SEQKGKAAL_	ENSG00000100014|ENST00000314328|SPECC1L;nc|ENSG00000100014|Q69YQ0-2|SPECC1L;SPECC1L|p.I644Tfs*3|1|0.09|ENSG00000100014|chr22:24322910-24322911|-/C|frameshift_variant;SPECC1L|p.N785Mfs*11|1|0.38|ENSG00000100014|chr22:24330383-24330383|A/-|frameshift_variant	82.24051045832904	0.08786059719216216	6				NaN	NaN	0	NaN	1401	2406	3804
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3810	14.898	NaN	3132.2	30	0	685.07	0.033	+			46766	VGTSGNSKV	9	52	424.72719623566246	847.4398395381249	2	424.72711181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VGTSGNSKV_	ENST00000333891.13_1_7:82580025-82580196:-|nuORF	31.529811441608018	0.5085848003137583	6				NaN	NaN	0	NaN	1402	2406	3804
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3811	14.899	NaN	1352	30	0	400.46	0.141			+	21043	KKKRCAPKK	9	29	362.9009704589844	NaN	0	362.9009704589844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KKKRCAPKK_	REV__ENSG00000188620|ENST00000357878|HMX3	19.996771675451527	0.3693019437812985	6				NaN	NaN	0	NaN	1403	2406	3804
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3830	14.938	NaN	11498	30	0	1733.6	0.214	+			19267	KAFDKFKK	8	74	506.3006533584476	NaN	0	506.30072021484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAFDKFKK_	ENSG00000105821|ENST00000379263|DNAJC2;ENST00000475065.5_1_7:102953018-102963086:-|nuORF;nc|ENSG00000105821|Q99543-2|DNAJC2	95.81516180277367	1.7418937515398478	6				NaN	NaN	0	NaN	1419	2409	3829
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3831	14.942	NaN	18263	30	0	4035.9	0.106	+			5096	ATSNVHMVKK	10	50	372.20597749425343	1113.5961030829603	3	372.20587158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATSNVHMVKK_	ENSG00000197256|ENST00000586659|KANK2;ENST00000590400.1_1_19:11303345-11305238:-|nuORF;KANK2|p.P430Rfs*5|1|0.23|ENSG00000197256|chr19:11178681-11178681|G/-|frameshift_variant;nc|ENSG00000197256|Q63ZY3-2|KANK2;nc|ENSG00000197256|Q63ZY3-3|KANK2	33.921630207806714	0.6028135429846169	6				NaN	NaN	0	NaN	1420	2409	3829
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3832	14.944	NaN	16149	30	0	4957.2	0.106	+			15358	GTVSKVTGK	9	79	438.7610761619698	875.5075993907396	2	438.7607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTVSKVTGK_	ENSG00000196526|ENST00000420658|AFAP1;nc|ENSG00000196526|Q8N556|AFAP1	168.25843898104137	0.0030641937004078144	6				NaN	NaN	0	NaN	1421	2409	3829
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3833	14.946	NaN	2470.9	30	0	341.51	0.106	+			33720	RPGLPGPVGLP	11	58	530.3175659179688	NaN	0	530.3175659179688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RPGLPGPVGLP_	ENSG00000049089|ENST00000372748|COL9A2;ENST00000482722.5_1_1:40766856-40777859:-|nuORF	35.61828744233558	0.4066803947888518	6				NaN	NaN	0	NaN	1422	2409	3829
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3834	14.947	NaN	10682	30	0	745.22	0.106			+	12190	GAPGECRLNRQ	11	86	400.8666193941684	NaN	0	400.8665771484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GAPGECRLNRQ_	REV__ENST00000393580.2_1_11:73087809-73102263:+|nuORF	42.33807565288922	0.3703495330385095	6				NaN	NaN	0	NaN	1423	2409	3829
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3835	14.949	NaN	2373.5	30	0	544.81	0.034			+	32003	QRIVQVVK	8	53	485.31353180663035	968.6125106800607	2	485.3135681152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QRIVQVVK_	REV__ENSG00000143314|ENST00000361531|MRPL24	90.77665401227738	0.27511901818546464	6				NaN	NaN	0	NaN	1424	2409	3829
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3836	14.95	NaN	7936.7	30	0	3095.5	0.138	+			40387	STTVSPAVQ	9	54	445.2350313073214	888.4555096814428	2	445.2347106933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STTVSPAVQ_	ENSG00000148516|ENST00000424869|ZEB1;ENST00000488625.6_1_10:31676182-31816189:+|nuORF;nc|ENSG00000148516|P37275-3|ZEB1;nc|ENSG00000148516|P37275-4|ZEB1;nc|ENSG00000148516|P37275-5|ZEB1;nc|ENSG00000148516|P37275|ZEB1;ZEB1|p.K1058Nfs*20|1|0.36|ENSG00000148516|chr10:31527059-31527059|A/-|frameshift_variant	42.396135135203025	0.392153681582562	6				NaN	NaN	0	NaN	1425	2409	3829
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3854	14.988	NaN	70160	30	0	6590.9	0.214			+	16118	HDQTQGQTQQ	10	99	585.7603798863461	1169.506206839492	2	585.7605590820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HDQTQGQTQQ_	REV__MAGEB3|p.R19Q|1|0.13|ENSG00000198798|chrX:30235980-30235980|G/A|missense_variant	79.71258880314673	0.19796908725841375	6				NaN	NaN	0	NaN	1440	2412	3853
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3855	14.992	NaN	42924	30	0	6467.6	0.106	+			39380	STDKQTCLK	9	87	512.2606778629198	1022.5068027926396	2	512.2606201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STDKQTCLK_	ENSG00000198788|ENST00000675028|MUC2;nc|ENSG00000198788|Q02817|MUC2	177.3047273071476	0.0015666121956477066	6				NaN	NaN	0	NaN	1441	2412	3853
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3856	14.994	NaN	6644.7	30	0	2550.3	0.106			+	4357	ATGSAPLNQ	9	61	429.7198049375074	857.4250569418148	2	429.7193603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATGSAPLNQ_	REV__ENST00000447799.5_1_12:104165049-104171017:-|nuORF	69.6276240434122	0.14239879520340665	6				NaN	NaN	0	NaN	1442	2412	3853
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3857	14.996	NaN	4731.9	30	0	877.42	0.106	+			33135	REREKEREL	9	50	415.5617843597721	1243.6635236795164	3	415.5616455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_REREKEREL_	ENSG00000111676|ENST00000396684|ATN1;ENSG00000123200|ENST00000679008|ZC3H13;nc|ENSG00000123200|Q5T200-2|ZC3H13;nc|ENSG00000123200|Q5T200|ZC3H13;ZC3H13|p.A1112Vfs*54|1|0.23|ENSG00000123200|chr13:45969209-45969209|G/-|frameshift_variant;ZC3H13|p.K1006Nfs*31|2|0.28|ENSG00000123200|chr13:45969526-45969526|T/-|frameshift_variant;ZC3H13|p.R1007Tfs*2|1|0.37|ENSG00000123200|chr13:45969525-45969526|-/T|frameshift_variant;ZC3H13|p.R758Sfs*104|1|0.32|ENSG00000123200|chr13:45975468-45975477|CTCTCTCTCC/-|frameshift_variant	35.15202426646627	0.4747332964206883	6				NaN	NaN	0	NaN	1443	2412	3853
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3858	14.998	NaN	1350.6	30	0	233.05	0.106	+			18782	ITQGKDAAVSK	11	48	559.3145341631571	NaN	0	559.3145751953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ITQGKDAAVSK_	ENSG00000140464|ENST00000268058|PML;ENST00000564725.1_1_15:74290377-74317280:+|nuORF;nc|ENSG00000140464|P29590-10|PML;nc|ENSG00000140464|P29590-11|PML;nc|ENSG00000140464|P29590-12|PML;nc|ENSG00000140464|P29590-13|PML;nc|ENSG00000140464|P29590-14|PML;nc|ENSG00000140464|P29590-2|PML;nc|ENSG00000140464|P29590-3|PML;nc|ENSG00000140464|P29590-4|PML;nc|ENSG00000140464|P29590-5|PML;nc|ENSG00000140464|P29590-8|PML;nc|ENSG00000140464|P29590-9|PML	68.62578634547417	0.1499985929117389	6				NaN	NaN	0	NaN	1444	2412	3853
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3859	14.999	NaN	5309.7	30	0	658.66	0.035	+			22728	KVAVATPAKK	10	64	506.8294607348447	1011.6443685364894	2	506.8292236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KVAVATPAKK_	ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232323706-232327997:-|nuORF	102.04737869847887	0.07161667025623261	6				NaN	NaN	0	NaN	1445	2412	3853
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3860	15	NaN	815.62	30	0	107.2	0.139	+			51570	YYKGVKKV	8	31	492.7955627441406	NaN	0	492.7955627441406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YYKGVKKV_	tr|U7SSB3|U7SSB3_FUSNULipoproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01566PE=4SV=1	25.450171626174864	1.7418937515398478	6				NaN	NaN	0	NaN	1446	2412	3853
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3878	15.039	NaN	18411	30	0	6885.9	0.214			+	3708	ATAALNLGQ	9	65	429.73762054540725	857.4606881576145	2	429.7374267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATAALNLGQ_	REV__ENSG00000165476|ENST00000373758|REEP3;REV__nc|ENSG00000165476|Q6NUK4-2|REEP3	120.62098272573253	0.020823834273767324	6				NaN	NaN	0	NaN	1461	2415	3877
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3879	15.043	NaN	11308	30	0	1863.6	0.106	+			20728	KGSSNSYAIKK	11	74	591.8276915734738	1181.6408302137474	2	591.8275756835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KGSSNSYAIKK_	ENSG00000083845|ENST00000196551|RPS5	182.91823989275488	6.243756956516254E-06	6				NaN	NaN	0	NaN	1462	2415	3877
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3880	15.045	NaN	32597	30	0	10043	0.106	+			20729	KGSSNSYAIKK	11	92	394.88759550679697	1181.6409571205909	3	394.8871154785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KGSSNSYAIKK_	ENSG00000083845|ENST00000196551|RPS5	187.15520657039602	3.4317129044436567E-06	6				NaN	NaN	0	NaN	1463	2415	3877
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3881	15.047	NaN	849.94	30	0	99.807	0.106			+	1534	AGAWGIFLAAG	11	40	517.276611328125	NaN	0	517.276611328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AGAWGIFLAAG_	REV__ENSG00000134873|ENST00000299339|CLDN10;REV__nc|ENSG00000134873|P78369-2|CLDN10;REV__nc|ENSG00000134873|P78369-3|CLDN10	40.5726180659479	0.38302970871559716	6				NaN	NaN	0	NaN	1464	2415	3877
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3882	15.049	NaN	4086.9	30	0	1178.9	0.106	+			15820	GVYLTKKEQKK	11	48	441.2663987444961	1320.7773668336883	3	441.2658996582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GVYLTKKEQKK_	ENSG00000117360|ENST00000324862|PRPF3;ENST00000467329.5_1_1:150300781-150316915:+|nuORF;ENST00000493553.1_1_1:150315777-150316738:+|nuORF;ENST00000519029.1_1_8:67896909-67897419:-|nuORF	29.550750289552195	0.6798279264880025	6				NaN	NaN	0	NaN	1465	2415	3877
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3883	15.051	NaN	989.53	30	0	148.39	0.033	+			30977	QEQVAEPV	8	42	450.22585082203204	NaN	0	450.2687072753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QEQVAEPV_	ENST00000448507.5_1_4:7033675-7033846:+|nuORF	45.9519527083369	1.7418937515398478	6				NaN	NaN	0	NaN	1466	2415	3877
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3884	15.051	NaN	1913.7	30	0	367.38	0.139	+			27860	MTGSSAPCK	9	56	469.70696446949563	NaN	0	469.70697021484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_MTGSSAPC(Carbamidomethyl (C))K_	ENST00000392001.6_1_2:238499129-238499162:-|nuORF	65.46538089061403	0.1260090208616529	6				NaN	NaN	0	NaN	1467	2415	3877
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3902	15.089	NaN	59711	30	0	13145	0.214	+			44346	TSGPVTTSK	9	94	439.2349493304495	876.4553457276991	2	439.2347717285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSGPVTTSK_	ENSG00000197386|ENST00000355072|HTT;ENST00000510626.5_1_4:3131970-3189635:+|nuORF;HTT|p.H2238Ffs*6|1|0.28|ENSG00000197386|chr4:3212643-3212644|CA/-|frameshift_variant;HTT|p.P2413Hfs*44|1|0.6|ENSG00000197386|chr4:3217944-3217944|C/-|frameshift_variant	115.49404669440601	0.023927554121326553	6				NaN	NaN	0	NaN	1482	2418	3901
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3903	15.093	NaN	27607	30	0	6570.5	0.106	+			33071	REKKEESEL	9	91	574.3016034847772	1146.5886540363542	2	574.3016967773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_REKKEESEL_	ENSG00000067082|ENST00000497571|KLF6;nc|ENSG00000067082|Q99612-2|KLF6;nc|ENSG00000067082|Q99612-3|KLF6	152.06079943815163	0.00638878961959199	6				NaN	NaN	0	NaN	1483	2418	3901
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3904	15.095	NaN	44784	30	0	12376	0.106	+			45732	VADKPQTEFL	10	88	383.20324259418334	NaN	0	383.2032165527344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VADKPQTEFL_	ENSG00000177238|ENST00000322122|TRIM72;nc|ENSG00000177238|Q6ZMU5-2|TRIM72;TRIM72|p.P257Hfs*28|1|0.49|ENSG00000177238|chr16:31222852-31222852|C/-|frameshift_variant	48.601550744091256	0.31444367966696773	6				NaN	NaN	0	NaN	1484	2418	3901
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3905	15.097	NaN	2390.6	30	0	536.96	0.106	+			20267	KENGGARL	8	47	422.7352694688723	NaN	0	422.7352600097656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KENGGARL_	ENSG00000118137|ENST00000236850|APOA1	20.94693142431847	1.7418937515398478	6				NaN	NaN	0	NaN	1485	2418	3901
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3906	15.098	NaN	7301.8	30	0	2842.6	0.106	+			22526	KTQKIVIKK	9	54	362.58497829844976	1084.7331054955494	3	362.5849304199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KTQKIVIKK_	ENSG00000147654|ENST00000337573|EBAG9;nc|ENSG00000147654|O00559-2|EBAG9	58.2462437865262	0.22823408064396822	6				NaN	NaN	0	NaN	1486	2418	3901
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3907	15.1	NaN	4984.1	30	0	1400.6	0.034	+			45304	TVSATSPNK	9	50	452.7403744544092	903.4661959756185	2	452.7398986816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TVSATSPNK_	ENSG00000105856|ENST00000222574|HBP1;nc|ENSG00000105856|O60381-2|HBP1;nc|ENSG00000105856|O60381-3|HBP1	82.7504851949679	0.08565546331141553	6				NaN	NaN	0	NaN	1487	2418	3901
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3908	15.101	NaN	2821.2	30	0	412.59	0.142	+			34488	RVDITSKGK	9	48	335.20139175005113	NaN	0	335.20135498046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RVDITSKGK_	ENSG00000134153|ENST00000256545|EMC7	47.95952297671804	0.22075498469600283	6				NaN	NaN	0	NaN	1488	2418	3901
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3926	15.14	NaN	456170	30	0	80898	0.156	+			6345	AVTKYTSSK	9	122	492.77211299357344	983.5296730539469	2	492.771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVTKYTSSK_	ENSG00000146047|ENST00000274764|H2BC1;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000196890|ENST00000693095|H2BC26;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000436555.1_1_1:228651916-228652012:-|nuORF;nc|ENSG00000203814|Q5QNW6-2|H2BC18;nc|ENSG00000285480|A0A2R8Y619|H2BK1	178.54760496737404	0.0014418427517892064	6				NaN	NaN	0	NaN	1503	2421	3925
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3927	15.143	NaN	1285.1	30	0	302.17	0.106				-1	RQGLLGPRA	9	39	505.2983808464589	NaN	0	505.29852294921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))RQGLLGPRA_	ENSG00000133247|ENST00000255613|KMT5C;REV__ENST00000496841.5_1_2:128377972-128392002:+|nuORF	18.324413293986947	0.3749620627292244	6				NaN	NaN	0	NaN	1504	2421	3925
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3928	15.145	NaN	2994	30	0	768.31	0.106			+	26176	LSRGPARSRAG	11	44	376.5509553454857	NaN	0	376.5801696777344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSRGPARSRAG_	REV__ENST00000453291.1_1_9:123550442-123555530:-|nuORF;REV__ENST00000474117.1_1_9:123550555-123555629:-|nuORF;REV__ENST00000476481.1_1_9:123555368-123555530:-|nuORF	37.59989570853033	0.39784920612721525	6				NaN	NaN	0	NaN	1505	2421	3925
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3929	15.147	NaN	1921.8	30	0	411.17	0.106			+	-1	ASFRVNTDML	10	37	390.5266836469034	1168.5582215409102	3	390.5264892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_ASFRVNTDM(Oxidation (M))L_	REV__ARHGEF15|p.L618Rfs*24|1|0.38|ENSG00000198844|chr17:8318643-8318643|T/-|frameshift_variant;REV__ENSG00000198844|ENST00000361926|ARHGEF15	28.081489160057373	0.6505064946289502	6				NaN	NaN	0	NaN	1506	2421	3925
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3930	15.149	NaN	1281.4	30	0	294.67	0.106			+	23058	KVTERWKL	8	40	530.3206176757812	NaN	0	530.3206176757812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KVTERWKL_	REV__ENST00000396472.5_1_14:35550357-35550390:+|nuORF	30.503639358989545	1.7418937515398478	6				NaN	NaN	0	NaN	1507	2421	3925
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3931	15.151	NaN	6958.6	30	0	1568.5	0.106	+			38984	SSSASSTLK	9	50	434.2243255731704	866.4340982131408	2	434.224365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSSASSTLK_	ENSG00000138162|ENST00000369005|TACC2;nc|ENSG00000138162|O95359-1|TACC2;nc|ENSG00000138162|O95359-3|TACC2;nc|ENSG00000138162|O95359-5|TACC2;nc|ENSG00000138162|O95359-6|TACC2;TACC2|p.V2229Cfs*22|1|0.07|ENSG00000138162|chr10:122211108-122211109|-/A|frameshift_variant	70.8162118820467	0.13725933411854815	6				NaN	NaN	0	NaN	1508	2421	3925
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3932	15.152	NaN	2946.5	30	0	191.73	0.035			+	7654	DKRKSKLK	8	70	501.8251603926557	1001.6357678521114	2	501.8246765136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DKRKSKLK_	REV__chr20:9337548-9338008|146|21.64|0.06|8.54|+|1|TE_info:L2c,L2c_dup131970,L2,LINE,donor,-,9337306,9337548|None,PLCB4|4	32.81241826257853	0.7059802730411993	6				NaN	NaN	0	NaN	1509	2421	3925
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3950	15.188	NaN	29289	30	0	6179.4	0.214	+			34410	RTSSSRAVVVK	11	73	397.2389087340812	1188.6948968024435	3	397.23870849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTSSSRAVVVK_	CON__H-INV:HIT000292931;CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	68.78561909154949	0.24586362119257035	6				NaN	NaN	0	NaN	1524	2424	3949
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3951	15.192	NaN	61747	30	0	20367	0.106	+			43624	TINGHNAEVRK	11	82	413.55831838728574	1237.6531257620572	3	413.5582275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TINGHNAEVRK_	ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;ENST00000495810.1_1_7:26235422-26236427:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1	75.56570413236392	0.18934020192193834	6				NaN	NaN	0	NaN	1525	2424	3949
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3952	15.194	NaN	6609.8	30	0	596.09	0.106				-1	 	0	72	393.2159232182586	392.2086467516586	1	393.215576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1526	2424	3949
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3953	15.196	NaN	7568.6	30	0	991.68	0.106	+			35992	SEHPSTSKM	9	66	502.2295314870764	1002.4445100409528	2	502.2294616699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SEHPSTSKM_	ENSG00000102241|ENST00000218364|HTATSF1;HTATSF1|p.K555Nfs*38|1|0.74|ENSG00000102241|chrX:136511406-136511406|A/-|frameshift_variant;HTATSF1|p.V610Cfs*2|1|0.32|ENSG00000102241|chrX:136511568-136511568|A/-|frameshift_variant	98.62937762414208	0.04060045538121712	6				NaN	NaN	0	NaN	1527	2424	3949
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3954	15.198	NaN	6583.5	30	0	1439.1	0.106	+			34707	RVTYPAKAK	9	65	517.3112457514578	1032.6079385697155	2	517.3118286132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RVTYPAKAK_	ENSG00000118705|ENST00000237530|RPN2;nc|ENSG00000118705|P04844-2|RPN2	93.1432384553994	0.056003526918089595	6				NaN	NaN	0	NaN	1528	2424	3949
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3955	15.199	NaN	1250.6	30	0	200.75	0.038			+	6707	AYVVPYVSECD	11	47	622.7788928873988	1243.5432328415975	2	622.779052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AYVVPYVSECD_	REV__ENSG00000066923|ENST00000615138|STAG3;REV__nc|ENSG00000292277|Q9UJ98-2|STAG3;REV__nc|ENSG00000292277|Q9UJ98-3|STAG3;REV__nc|ENSG00000292277|Q9UJ98|STAG3	44.116797842482775	0.5016126852448448	6				NaN	NaN	0	NaN	1529	2424	3949
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3956	15.2	NaN	4331.9	30	0	1302.4	0.14	+			13973	GSASPAVTK	9	48	409.2242237901809	NaN	0	409.2244873046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GSASPAVTK_	ENSG00000197969|ENST00000360280|VPS13A;nc|ENSG00000197969|Q96RL7-2|VPS13A;nc|ENSG00000197969|Q96RL7-3|VPS13A;nc|ENSG00000197969|Q96RL7-4|VPS13A;VPS13A|p.I1709Nfs*6|1|0.34|ENSG00000197969|chr9:77318397-77318398|-/A|frameshift_variant;VPS13A|p.M1697Cfs*13|1|0.07|ENSG00000197969|chr9:77318363-77318363|A/-|frameshift_variant;VPS13A|p.N2071Tfs*18|2|0.32|ENSG00000197969|chr9:77337367-77337367|A/-|frameshift_variant;VPS13A|p.Y2315Ifs*2|1|0.09|ENSG00000197969|chr9:77340463-77340463|T/-|frameshift_variant	78.26377905018397	0.07733306720594871	6				NaN	NaN	0	NaN	1530	2424	3949
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3974	15.239	NaN	23149	30	0	4811.9	0.214	+			46409	VENQSAQE	8	81	452.704263406344	903.393973879488	2	452.704345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VENQSAQE_	ENSG00000127603|ENST00000564288|MACF1;MACF1|p.A5223Lfs*8|1|0.21|ENSG00000127603|chr1:39388486-39388486|G/-|frameshift_variant;MACF1|p.N4824Kfs*19|1|0.33|ENSG00000127603|chr1:39387292-39387293|-/A|frameshift_variant;MACF1|p.T4896Lfs*29|1|0.27|ENSG00000127603|chr1:39387507-39387507|A/-|frameshift_variant;nc|ENSG00000127603|Q9UPN3-5|MACF1;nc|ENSG00000127603|Q9UPN3|MACF1	54.776311868738084	0.5534952410049249	6				NaN	NaN	0	NaN	1545	2427	3973
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3975	15.243	NaN	4965.1	30	0	994.45	0.106	+			1411	AEVTSHAA	8	52	393.1933505591623	784.3721481851246	2	393.1930236816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEVTSHAA_	ENSG00000050405|ENST00000341247|LIMA1;LIMA1|p.T536Lfs*38|2|0.4|ENSG00000050405|chr12:50177739-50177739|G/-|frameshift_variant;nc|ENSG00000050405|Q9UHB6-4|LIMA1	76.84663266511073	0.3498490246073164	6				NaN	NaN	0	NaN	1546	2427	3973
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3976	15.245	NaN	7705.3	30	0	3040.8	0.106	+			5646	AVDDKQLRK	9	38	358.2084780247999	1071.6036046745996	3	358.2086181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVDDKQLRK_	ENSG00000106344|ENST00000223073|RBM28;nc|ENSG00000106344|Q9NW13-2|RBM28;RBM28|p.K496R|1|0.23|ENSG00000106344|chr7:128321342-128321342|T/C|missense_variant;RBM28|p.M599*|2|0.24|ENSG00000106344|chr7:128315014-128315014|T/-|frameshift_variant	29.14955571784316	0.5308295550522326	6				NaN	NaN	0	NaN	1547	2427	3973
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3977	15.247	NaN	1916.8	30	0	543.02	0.106	+			5577	AVATAAAAK	9	37	387.22937526101805	NaN	0	387.2293395996094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVATAAAAK_	ENST00000341259.6_1_12:111843787-111843931:+|nuORF	51.33545320467046	0.19748963086191895	6				NaN	NaN	0	NaN	1548	2427	3973
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3978	15.249	NaN	1585.2	30	0	293.22	0.106			+	31208	QGRRIVFH	8	60	506.7931715567883	1011.5717901803766	2	506.7928466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QGRRIVFH_	REV__ENSG00000115677|ENST00000310931|HDLBP;REV__ENST00000479169.5_1_2:242177863-242181895:-|nuORF;REV__ENST00000487169.5_1_2:242174673-242189369:-|nuORF;REV__HDLBP|p.R813H|1|0.44|ENSG00000115677|chr2:241239774-241239774|C/T|missense_variant;REV__nc|ENSG00000115677|Q00341-2|HDLBP	35.200714571348534	0.6875396545722289	6				NaN	NaN	0	NaN	1549	2427	3973
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3979	15.251	NaN	575.98	30	0	56.63	0.035				-1	QQINFMSL	8	39	498.74420166015625	NaN	0	498.74420166015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_QQINFM(Oxidation (M))SL_	ENSG00000197603|ENST00000651892|CPLANE1;nc|ENSG00000197603|Q9H799-5|CPLANE1;nc|ENSG00000197603|Q9H799|CPLANE1	38.80614096846853	1.7418937515398478	6				NaN	NaN	0	NaN	1550	2427	3973
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3980	15.251	NaN	1035.7	30	0	163.05	0.14			+	6840	CIKTYVCTK	9	43	529.7705078125	NaN	0	529.7705078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_CIKTYVCTK_	REV__L1MC1_dup2137|chr3:11202598-11203364:-|2.548944203961612|0.3234029913481031|2.98|483.0|8|2|sense	44.116797842482775	0.2472372736944149	6				NaN	NaN	0	NaN	1551	2427	3973
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3998	15.291	NaN	45115	30	0	12642	0.214	+			50758	YEKKAAKL	8	76	475.787529741698	949.560506550196	2	475.7868347167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YEKKAAKL_	ENSG00000189403|ENST00000341423|HMGB1;nc|ENSG00000067066|P23497|SP100	110.11987700582712	0.24509564897437786	6				NaN	NaN	0	NaN	1566	2430	3997
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3999	15.294	NaN	4333.9	30	0	677.94	0.106	+			42962	TEKAKEERL	9	57	552.3062319558369	1102.5979109784737	2	552.3067016601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEKAKEERL_	ENSG00000149503|ENST00000394818|INCENP;INCENP|p.E620D|1|0.06|ENSG00000149503|chr11:62145652-62145652|G/T|missense_variant;nc|ENSG00000149503|Q9NQS7-2|INCENP	83.6470233535746	0.08277643980271215	6				NaN	NaN	0	NaN	1567	2430	3997
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4000	15.297	NaN	13597	30	0	3260.6	0.106	+			4395	ATHRQKLY	8	66	339.5259725991066	NaN	0	339.52593994140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATHRQKLY_	ENSG00000169710|ENST00000306749|FASN	31.954861631926434	1.7418937515398478	6				NaN	NaN	0	NaN	1568	2430	3997
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4001	15.298	NaN	3723.8	30	0	1209.2	0.106	+			49198	VVMVCILLY	9	33	351.5329534082301	1051.5770308248905	3	351.5329284667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVMVCILLY_	ENSG00000170385|ENST00000367001|SLC30A1	29.14955571784316	0.5308295550522326	6				NaN	NaN	0	NaN	1569	2430	3997
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4002	15.3	NaN	4358.2	30	0	789.65	0.106			+	21457	KNGDAEER	8	57	459.7171489511442	917.4197449690885	2	459.7168273925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KNGDAEER_	REV__ENSG00000052749|ENST00000370992|RRP12;REV__ENST00000479481.5_1_10:99116853-99131081:-|nuORF;REV__ENST00000491313.5_1_10:99116853-99127090:-|nuORF;REV__nc|ENSG00000052749|Q5JTH9-2|RRP12;REV__nc|ENSG00000052749|Q5JTH9-3|RRP12	54.776311868738084	0.5534952410049249	6				NaN	NaN	0	NaN	1570	2430	3997
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4003	15.302	NaN	1912.7	30	0	475.56	0.033	+			44306	TSDSKEAK	8	45	433.21672561344934	864.4188982936987	2	433.2165222167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TSDSKEAK_	ENSG00000139865|ENST00000553443|TTC6	38.80614096846853	0.6637206697844082	6				NaN	NaN	0	NaN	1571	2430	3997
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4004	15.302	NaN	9697.2	30	0	1370.8	0.138			+	21835	KRGIGTSH	8	56	428.24288503836743	NaN	0	428.24310302734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KRGIGTSH_	REV__ENSG00000172031|ENST00000370383|EPHX4	51.33545320467046	1.7418937515398478	6				NaN	NaN	0	NaN	1572	2430	3997
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4022	15.341	NaN	27184	30	0	5694.6	0.214	+			2668	AQNAKVIEK	9	84	334.19762954512896	999.571059235587	3	334.19757080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AQNAKVIEK_	ENSG00000018610|ENST00000644802|STEEP1;ENST00000469448.1_1_X:118673692-118676584:-|nuORF;nc|ENSG00000018610|Q9H5V9-2|STEEP1;nc|ENSG00000018610|Q9H5V9-3|STEEP1	82.7504851949679	0.08565546331141553	6				NaN	NaN	0	NaN	1587	2433	4021
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4023	15.344	NaN	4214.3	30	0	547.17	0.106			+	34138	RSVGDPIL	8	47	428.7475418717158	855.4805308102316	2	428.7476501464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RSVGDPIL_	REV__FRYL|p.M572V|1|0.26|ENSG00000075539|chr4:48586655-48586655|T/C|missense_variant	71.29570347882199	0.39610197767395533	6				NaN	NaN	0	NaN	1588	2433	4021
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4024	15.346	NaN	2091.8	30	0	311.19	0.106			+	2714	AQSMPGQK	8	46	423.7105674637948	845.4065819943896	2	423.7102355957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AQSMPGQK_	REV__AKAP13|p.T1385S|1|0.38|ENSG00000170776|chr15:85585816-85585816|C/G|missense_variant	49.44154591367651	0.597725784090933	6				NaN	NaN	0	NaN	1589	2433	4021
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4025	15.348	NaN	2079.2	30	0	258.72	0.106			+	21446	KNEERLSK	8	59	502.2797890069755	NaN	0	502.27972412109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KNEERLSK_	REV__ENSG00000174015|ENST00000310521|CBY2;REV__nc|ENSG00000174015|Q8NA61-2|CBY2	85.16082228582465	1.7418937515398478	6				NaN	NaN	0	NaN	1590	2433	4021
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4026	15.35	NaN	811.43	30	0	162.56	0.106	+			23143	KVWLIDVS	8	41	480.2796325683594	NaN	0	480.2796325683594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KVWLIDVS_	ENSG00000101782|ENST00000339486|RIOK3;nc|ENSG00000101782|O14730-2|RIOK3;RIOK3|p.L482*|1|0.4|ENSG00000101782|chr18:23479412-23479412|T/-|frameshift_variant	42.47446043378293	1.7418937515398478	6				NaN	NaN	0	NaN	1591	2433	4021
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4027	15.352	NaN	365.86	30	0	92.817	0.036	+			47601	VRSLLGLSNS	10	20	349.2047119140625	NaN	0	349.2047119140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VRSLLGLSNS_	ENSG00000196792|ENST00000357479|STRN3;nc|ENSG00000196792|Q13033-2|STRN3;STRN3|p.E617Kfs*24|1|0.23|ENSG00000196792|chr14:30906916-30906916|C/-|frameshift_variant;STRN3|p.N599Ifs*42|1|0.35|ENSG00000196792|chr14:30906969-30906969|T/-|frameshift_variant	14.137123925751023	0.4201028297492154	6				NaN	NaN	0	NaN	1592	2433	4021
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4028	15.352	NaN	1472.5	30	0	614.17	0.14			+	21926	KRVQLNGPSG	10	34	528.3024489214001	1054.5903449096002	2	528.30224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KRVQLNGPSG_	REV__ENSG00000011478|ENST00000012049|QPCTL;REV__nc|ENSG00000011478|Q9NXS2-3|QPCTL	26.69291269510374	0.6618461711292317	6				NaN	NaN	0	NaN	1593	2433	4021
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4046	15.391	NaN	87225	30	0	24351	0.214	+			44597	TTCSKVFKK	9	86	366.87059301508685	1097.5899496454606	3	366.8707275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_TTC(Carbamidomethyl (C))SKVFKK_	ENSG00000167625|ENST00000301215|ZNF526	106.68306549817024	0.032382560583716295	6				NaN	NaN	0	NaN	1608	2436	4045
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4047	15.394	NaN	10076	30	0	2857.5	0.106				-1	GEKPFKCKK	9	47	374.54241508652495	1120.605415859775	3	374.87652587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GEKPFKC(Carbamidomethyl (C))KK_	ENSG00000160352|ENST00000456283|ZNF714;ENSG00000168661|ENST00000601142|ZNF30;ENST00000601416.1_19:21281704-21301132:+|nuORF;ENST00000601957.5_1_19:35433558-35435739:+|nuORF;nc|ENSG00000160352|Q96N38-2|ZNF714;nc|ENSG00000160352|Q96N38|ZNF714;nc|ENSG00000168661|P17039-2|ZNF30;ZNF714|p.C150Y|1|0.41|ENSG00000160352|chr19:21117113-21117113|G/A|missense_variant	22.579656572578934	0.5922287541734749	6				NaN	NaN	0	NaN	1609	2436	4045
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4048	15.396	NaN	1645.1	30	0	151.69	0.106	+			25887	LSGARWRA	8	46	458.7579265557491	915.5013001782983	2	458.7584228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSGARWRA_	ENST00000374379.8_1_1:25169437-25169536:+|nuORF	50.0245360154114	0.5941082100236891	6				NaN	NaN	0	NaN	1610	2436	4045
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4049	15.398	NaN	2947.6	30	0	501.09	0.106			+	27326	MHRFFPHRQVD	11	54	490.57974252325675	1468.7173981699702	3	490.5794372558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MHRFFPHRQVD_	REV__ENSG00000175634|ENST00000312629|RPS6KB2;REV__ENST00000531765.2_1_11:67201468-67201970:+|nuORF	16.52985593315525	0.793090074565524	6				NaN	NaN	0	NaN	1611	2436	4045
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4050	15.4	NaN	4905.8	30	0	2429.2	0.106				-1	AFHICKFLQ	9	28	388.5399903500214	1162.5981416502643	3	388.87396240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_AFHIC(Carbamidomethyl (C))KFLQ_	ENSG00000168612|ENST00000372523|ZSWIM1;ZSWIM1|p.P379Lfs*20|1|0.42|ENSG00000168612|chr20:45883724-45883724|C/-|frameshift_variant	20.94693142431847	0.6074874384046576	6				NaN	NaN	0	NaN	1612	2436	4045
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4051	15.402	NaN	4358.8	30	0	654.27	0.033	+			36124	SEKPAEATA	9	54	452.2245893531601	902.4346257731203	2	452.22491455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SEKPAEATA_	ENSG00000214753|ENST00000301785|HNRNPUL2	41.42661286455405	0.403525789677298	6				NaN	NaN	0	NaN	1613	2436	4045
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4052	15.402	NaN	1987.2	30	0	681.84	0.142			+	-1	TGCKALTGESM	11	51	585.7603798863461	1169.506206839492	2	585.7611694335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C),Oxidation (M)	_TGC(Carbamidomethyl (C))KALTGESM(Oxidation (M))_	REV__ENSG00000102053|ENST00000338957|ZC3H12B;REV__nc|ENSG00000102053|Q5HYM0-2|ZC3H12B;REV__ZC3H12B|p.S479Afs*71|1|0.28|ENSG00000102053|chrX:65502124-65502124|C/-|frameshift_variant;REV__ZC3H12B|p.V574Cfs*14|1|0.11|ENSG00000102053|chrX:65502413-65502413|G/-|frameshift_variant	35.15202426646627	0.6210751305041943	6				NaN	NaN	0	NaN	1614	2436	4045
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4070	15.439	NaN	287080	30	0	35138	0.169			+	39162	SSVTRPVQK	9	112	501.29111268324783	1000.5676724332957	2	501.29058837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSVTRPVQK_	REV__DLGAP5|p.E743Rfs*25|1|0.45|ENSG00000126787|chr14:55151836-55151837|-/T|frameshift_variant;REV__ENSG00000126787|ENST00000247191|DLGAP5;REV__nc|ENSG00000126787|Q15398-1|DLGAP5;REV__nc|ENSG00000126787|Q15398-3|DLGAP5	93.5975768576971	0.05472259948179787	6				NaN	NaN	0	NaN	1629	2439	4069
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4071	15.442	NaN	18565	30	0	6691	0.106			+	45268	TVQIERGYTR	10	54	408.22290043586383	1221.6468719077916	3	408.22265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVQIERGYTR_	REV__ENSG00000153002|ENST00000282957|CPB1	41.42661286455405	0.5359995577334734	6				NaN	NaN	0	NaN	1630	2439	4069
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4072	15.444	NaN	4175.6	30	0	501.76	0.106	+			35446	SASHPMVGK	9	63	457.23152374016524	912.4484945471305	2	457.2312927246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SASHPMVGK_	ENSG00000148498|ENST00000374788|PARD3;nc|ENSG00000148498|Q8TEW0-10|PARD3;nc|ENSG00000148498|Q8TEW0-11|PARD3;nc|ENSG00000148498|Q8TEW0-4|PARD3;nc|ENSG00000148498|Q8TEW0-6|PARD3;nc|ENSG00000148498|Q8TEW0-7|PARD3;nc|ENSG00000148498|Q8TEW0-8|PARD3;nc|ENSG00000148498|Q8TEW0-9|PARD3;nc|ENSG00000148498|Q8TEW0|PARD3;PARD3|p.I456*|1|0.04|ENSG00000148498|chr10:34382573-34382573|T/-|frameshift_variant;PARD3|p.S1335Lfs*15|1|0.17|ENSG00000148498|chr10:34111237-34111238|-/G|frameshift_variant	101.60071028292904	0.0375685401170269	6				NaN	NaN	0	NaN	1631	2439	4069
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4073	15.446	NaN	20284	30	0	2011.4	0.106	+			34103	RSQKPVMVK	9	79	536.8186254044803	1071.6226978757604	2	536.8187255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RSQKPVMVK_	ENSG00000108107|ENST00000344063|RPL28;ENST00000412461.2_1_22:19043875-19044022:+|nuORF;ENST00000560583.5_1_19:55899571-55899697:+|nuORF	102.0615471778698	0.03709830720253279	6				NaN	NaN	0	NaN	1632	2439	4069
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4074	15.448	NaN	3461.2	30	0	367.68	0.106	+			34262	RTHMGQEPQ	9	55	550.2518805207197	1098.4892081082394	2	550.812255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_RTHM(Oxidation (M))GQEPQ_	ENST00000416109.2_1_12:7507704-7520763:-|nuORF	44.377184641726394	0.36891676396732553	6				NaN	NaN	0	NaN	1633	2439	4069
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4075	15.45	NaN	5804.1	30	0	1010	0.106				-1	QEMELPIM	8	71	503.7330202326948	1005.4514875321896	2	503.7328186035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_QEM(Oxidation (M))ELPIM_	ENSG00000187950|ENST00000537054|OVCH1;nc|ENSG00000187950|Q7RTY7|OVCH1;OVCH1|p.K1050Nfs*2|1|0.18|ENSG00000187950|chr12:29443368-29443368|T/-|frameshift_variant	45.9519527083369	0.6193794311207887	6				NaN	NaN	0	NaN	1634	2439	4069
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4076	15.451	NaN	1318.3	30	0	403.5	0.034			+	7737	DLWGAKNR	8	43	480.2578125	NaN	0	480.2578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DLWGAKNR_	REV__ENSG00000116688|ENST00000235329|MFN2	30.503639358989545	1.7418937515398478	6				NaN	NaN	0	NaN	1635	2439	4069
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4088	15.474	NaN	85157	30	0	46269	0.214	+			5225	ATTTTVTTK	9	70	462.2559322938437	922.4973116544875	2	462.2557678222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATTTTVTTK_	ENSG00000163349|ENST00000426820|HIPK1;HIPK1|p.N462*|1|0.27|ENSG00000163349|chr1:113955620-113955621|-/T|frameshift_variant;nc|ENSG00000163349|Q86Z02-2|HIPK1	134.7655990226056	0.012935733000282069	6				NaN	NaN	0	NaN	1644	2442	4087
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4089	15.478	NaN	6581.3	30	0	1353.1	0.106			+	32247	QTKLNVKR	8	63	493.80929391537916	985.6040348975583	2	493.8089599609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QTKLNVKR_	REV__ENSG00000115705|ENST00000329066|TPO;REV__nc|ENSG00000115705|P07202-2|TPO;REV__nc|ENSG00000115705|P07202-3|TPO;REV__nc|ENSG00000115705|P07202-4|TPO;REV__nc|ENSG00000115705|P07202-5|TPO;REV__nc|ENSG00000115705|P07202-6|TPO;REV__nc|ENSG00000115705|P07202-7|TPO;REV__nc|ENSG00000115705|P07202-8|TPO;REV__TPO|p.I241Tfs*18|1|0.13|ENSG00000115705|chr2:1456184-1456185|-/C|frameshift_variant	63.30626980617807	0.4690498839812213	6				NaN	NaN	0	NaN	1645	2442	4087
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4090	15.48	NaN	14866	30	0	11845	0.106	+			40685	SVASVASTAI	10	58	453.25046748701243	904.4863820408249	2	453.2503356933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVASVASTAI_	RBM10|p.A399V|1|0.29|ENSG00000182872|chrX:47180454-47180454|C/T|missense_variant	34.172542307311794	0.6007644933930345	6				NaN	NaN	0	NaN	1646	2442	4087
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4091	15.482	NaN	17906	30	0	7021.7	0.106			+	21162	KKVKLISMK	9	72	358.9072793211558	1073.7000085636673	3	358.90728759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KKVKLISMK_	REV__ENST00000550125.5_1_12:49399131-49412528:-|nuORF	63.30626980617807	0.18605348971131092	6				NaN	NaN	0	NaN	1647	2442	4087
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4092	15.484	NaN	6646	30	0	1560.1	0.106	+			29691	PGTTAVLTQ	9	49	444.24546153141335	886.4763701296267	2	444.2455139160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PGTTAVLTQ_	ENSG00000205220|ENST00000358514|PSMB10;ENST00000574576.2_1_16:67968465-67968768:-|nuORF	35.61828744233558	0.47037581924408073	6				NaN	NaN	0	NaN	1648	2442	4087
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4093	15.485	NaN	3033.2	30	0	353.01	0.106	+			13706	GPRKGREVY	9	50	531.2962244309181	1060.577895928636	2	531.2972412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GPRKGREVY_	ENSG00000063177|ENST00000549920|RPL18;ENST00000416734.1_1_7:121080890-121081274:-|nuORF;ENST00000547892.1_1_19:49119132-49119324:-|nuORF;ENST00000549533.1_1_19:49118631-49119324:-|nuORF;ENST00000551749.5_1_19:49119132-49119489:-|nuORF;ENST00000552347.5_1_19:49118631-49119489:-|nuORF;nc|ENSG00000063177|Q07020-2|RPL18	44.377184641726394	0.36891676396732553	6				NaN	NaN	0	NaN	1649	2442	4087
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4094	15.487	NaN	3731.4	30	0	516.46	0.036			+	42054	SWWIDHAGQ	9	56	550.2518805207197	1098.4892081082394	2	550.2523193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SWWIDHAGQ_	REV__L1MC5_dup2219|chr2:240616384-240616624:-|1.426517432550395|0.100608666825259|3.83|456.0|10|2|anti-sense	45.9519527083369	0.35044536499095585	6				NaN	NaN	0	NaN	1650	2442	4087
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4112	15.522	NaN	33532	30	0	11495	0.214	+			33459	RIQEHFNKK	9	88	400.55990199468283	1198.6578765842485	3	400.55963134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RIQEHFNKK_	ENSG00000157349|ENST00000288071|DDX19B;ENSG00000168872|ENST00000302243|DDX19A;ENST00000569319.5_1_16:70399881-70405886:+|nuORF;ENST00000569771.5_1_16:70395504-70405886:+|nuORF;nc|ENSG00000168872|Q9NUU7-2|DDX19A;nc|ENSG00000260537|Q9UMR2-2|DDX19B;nc|ENSG00000260537|Q9UMR2-3|DDX19B;nc|ENSG00000260537|Q9UMR2-4|DDX19B	107.00750918261382	0.032051501805654005	6				NaN	NaN	0	NaN	1665	2445	4111
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4113	15.526	NaN	2923	30	0	880.87	0.106	+			38475	SSASSTSLK	9	50	434.2245985756077	866.4346442180154	2	434.22430419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSASSTSLK_	ENSG00000196781|ENST00000376499|TLE1	51.19269402634007	0.2889735674168909	6				NaN	NaN	0	NaN	1666	2445	4111
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4114	15.528	NaN	14707	30	0	3323.5	0.106			+	43320	TGAPINGSK	9	68	422.729804631289	843.4450563293781	2	422.7297668457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TGAPINGSK_	REV__ENSG00000092847|ENST00000373204|AGO1;REV__ENSG00000123908|ENST00000220592|AGO2	109.47833844074708	0.029530294723441826	6				NaN	NaN	0	NaN	1667	2445	4111
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4115	15.53	NaN	13973	30	0	5330.6	0.106	+			5291	ATVINPMYI	9	43	341.182883093871	1020.526819881813	3	341.18310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATVINPMYI_	tr|U7T4T7|U7T4T7_FUSNU1-deoxy-D-xylulose-5-phosphatesynthaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00548PE=3SV=1	26.69291269510374	0.5537881896960711	6				NaN	NaN	0	NaN	1668	2445	4111
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4116	15.532	NaN	1296.9	30	0	187.25	0.106	+			2828	ASAFAGRR	8	44	418.2296702157714	834.4447874983429	2	418.2295837402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASAFAGRR_	ENST00000360240.10_1_3:48130367-48130646:-|nuORF	25.450171626174864	0.7628259754767981	6				NaN	NaN	0	NaN	1669	2445	4111
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4117	15.533	NaN	2632.9	30	0	653	0.036			+	50143	WITATLKEI	9	39	358.8764953613281	NaN	0	358.8764953613281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_WITATLKEI_	REV__ENSG00000186416|ENST00000688521|NKRF;REV__nc|ENSG00000186416|O15226-2|NKRF;REV__nc|ENSG00000186416|O15226|NKRF;REV__NKRF|p.R664Dfs*7|1|0.22|ENSG00000186416|chrX:119589435-119589435|T/-|frameshift_variant	34.172542307311794	0.30503706118289736	6				NaN	NaN	0	NaN	1670	2445	4111
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4118	15.534	NaN	18066	30	0	3007.2	0.141	+			34445	RTVSDSIKK	9	83	345.20483553444876	1032.5926772035464	3	345.5391540527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RTVSDSIKK_	ENSG00000137076|ENST00000314888|TLN1;nc|ENSG00000137076|Q9Y490-2|TLN1	122.93914200107957	0.019420478173996256	6				NaN	NaN	0	NaN	1671	2445	4111
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4136	15.572	NaN	36625	30	0	8450.1	0.214			+	38589	SSGAKGVLPTW	11	53	368.2012688517327	1101.5819771553981	3	368.20123291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSGAKGVLPTW_	REV__CCDC88C|p.R1860W|1|0.15|ENSG00000015133|chr14:91273134-91273134|G/A|missense_variant	39.252832667884924	0.5681665794958463	6				NaN	NaN	0	NaN	1686	2448	4135
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4137	15.576	NaN	17237	30	0	6183.4	0.106			+	43686	TKGESTEK	8	65	440.22467680662476	878.4348006800495	2	440.2291564941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TKGESTEK_	REV__ENSG00000156650|ENST00000287239|KAT6B;REV__KAT6B|p.L1460*|1|0.36|ENSG00000156650|chr10:75029198-75029198|T/-|frameshift_variant;REV__nc|ENSG00000156650|Q8WYB5-2|KAT6B;REV__nc|ENSG00000156650|Q8WYB5-3|KAT6B	75.04331003522576	0.3648751570195447	6				NaN	NaN	0	NaN	1687	2448	4135
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4138	15.578	NaN	2515.4	30	0	566.48	0.106			+	43295	TFPERKKK	8	60	517.3112457514578	1032.6079385697155	2	517.3045043945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TFPERKKK_	REV__ENSG00000140297|ENST00000396065|GCNT3	60.97194046774394	0.49215940876911696	6				NaN	NaN	0	NaN	1688	2448	4135
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4139	15.58	NaN	4490.9	30	0	985.87	0.106			+	9029	EGEGAQIKA	9	51	451.73239331762534	901.4502337020507	2	451.7323303222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EGEGAQIKA_	REV__EEA1|p.N1389Mfs*3|1|0.33|ENSG00000102189|chr12:92776081-92776081|T/-|frameshift_variant;REV__ENSG00000102189|ENST00000322349|EEA1	82.24051045832904	0.08786059719216216	6				NaN	NaN	0	NaN	1689	2448	4135
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4140	15.582	NaN	47963	30	0	16562	0.106	+			6516	AYARKQSVK	9	59	350.8732664890725	1049.5979700674175	3	350.8733215332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AYARKQSVK_	ENSG00000188674|ENST00000341287|C2orf80	45.9519527083369	0.35044536499095585	6				NaN	NaN	0	NaN	1690	2448	4135
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4141	15.583	NaN	937.55	30	0	101.31	0.033	+			42524	TAQGLEGLV	9	39	444.24546153141335	886.4763701296267	2	443.75872802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TAQGLEGLV_	nc|ENSG00000127603|O94854-4|MACF1;nc|ENSG00000127603|O94854|MACF1	37.81151784470057	0.4459294069877048	6				NaN	NaN	0	NaN	1691	2448	4135
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4142	15.584	NaN	1307.6	30	0	414.45	0.137			+	29214	NVSISIGK	8	43	409.2424919184321	NaN	0	409.242431640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NVSISIGK_	REV__ENSG00000129988|ENST00000217407|LBP	27.882242232435846	1.7418937515398478	6				NaN	NaN	0	NaN	1692	2448	4135
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4160	15.624	NaN	122070	30	0	21325	0.214	+			41606	SVQHVDAAEK	10	102	542.2749791560376	1082.535405378875	2	542.2753295898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVQHVDAAEK_	ENST00000585682.5_1_4:159092526-159092595:-|nuORF	139.15298810987372	0.010979919232517382	6				NaN	NaN	0	NaN	1707	2451	4159
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4161	15.627	NaN	24526	30	0	12756	0.106	+			408	AASSSSLEK	9	65	440.22467680662476	878.4348006800495	2	440.2243957519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AASSSSLEK_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196834|ENST00000451531|POTEI;ENST00000417985.1_1_X:46147855-46148119:-|nuORF;ENST00000418987.2_1_9:103493819-103494230:+|nuORF;ENST00000423183.1_1_3:12112396-12112453:+|nuORF;ENST00000450451.1_1_1:238090483-238090852:+|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2	129.42129120953632	0.01549634589885217	6				NaN	NaN	0	NaN	1708	2451	4159
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4162	15.629	NaN	4648.1	30	0	961.16	0.106				-1	 	0	42	360.7287309598221	719.4429089864442	2	360.7286071777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1709	2451	4159
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4163	15.631	NaN	4721.8	30	0	1245.1	0.106	+			33319	RGSEPVPEK	9	59	499.76687430256914	NaN	0	499.7668762207031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RGSEPVPEK_	ENSG00000084070|ENST00000372718|SMAP2;nc|ENSG00000084070|Q8WU79-2|SMAP2;nc|ENSG00000084070|Q8WU79-3|SMAP2	65.15724298150197	0.1273232316122292	6				NaN	NaN	0	NaN	1710	2451	4159
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4164	15.633	NaN	7359.9	30	0	2806.9	0.106			+	33979	RSFIMGPGGMC	11	50	606.7709534736504	1211.5273540141006	2	606.7711791992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_RSFIMGPGGMC(Carbamidomethyl (C))_	REV__ENSG00000198108|ENST00000305031|CHSY3;REV__ENST00000507545.1_1_5:129243822-129519938:+|nuORF	44.377184641726394	0.49804979881800077	6				NaN	NaN	0	NaN	1711	2451	4159
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4165	15.635	NaN	1300	30	0	230.06	0.035	+			24870	LKEYSEEK	8	49	513.2596294206353	1024.5047059080705	2	513.2597045898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LKEYSEEK_	tr|U7T484|U7T484_FUSNUAAA+ATPasedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00292PE=3SV=1	42.396135135203025	0.6414440140393314	6				NaN	NaN	0	NaN	1712	2451	4159
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4166	15.635	NaN	2137.6	30	0	519.58	0.139	+			29737	PHPRPGHC	8	53	479.2258520605483	956.4371511878966	2	479.74188232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_PHPRPGHC(Carbamidomethyl (C))_	ENSG00000168887|ENST00000306336|C2orf68;nc|nan|Q2NKX9-3|C2orf68	46.76643321282427	0.6143254112625767	6				NaN	NaN	0	NaN	1713	2451	4159
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4184	15.675	NaN	12136	30	0	4470.2	0.214			+	40370	STTTQTISQ	9	63	483.74049342814055	965.4664339230811	2	483.7401428222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STTTQTISQ_	REV__ENSG00000173572|ENST00000342929|NLRP13;REV__NLRP13|p.F460Sfs*10|1|0.2|ENSG00000173572|chr19:55912438-55912438|A/-|frameshift_variant;REV__NLRP13|p.F543Lfs*8|1|0.42|ENSG00000173572|chr19:55912188-55912188|A/-|frameshift_variant	96.0336014099291	0.047854655524928534	6				NaN	NaN	0	NaN	1728	2454	4183
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4185	15.678	NaN	11587	30	0	1982.2	0.106	+			12777	GELRTLLQ	8	60	465.274347004034	928.534141074868	2	465.27398681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GELRTLLQ_	CLCN1|p.K856Efs*16|1|0.37|ENSG00000188037|chr7:143350620-143350621|-/G|frameshift_variant;CLCN1|p.P939Lfs*9|1|0.39|ENSG00000188037|chr7:143351810-143351810|C/-|frameshift_variant;ENSG00000188037|ENST00000343257|CLCN1	124.59426212874841	0.22798698790419603	6				NaN	NaN	0	NaN	1729	2454	4183
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4186	15.681	NaN	2552.2	30	0	309.01	0.106			+	28945	NRVFGFIH	8	56	495.2677175578096	988.5208821824192	2	495.2672424316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NRVFGFIH_	REV__ENST00000555137.5_1_14:21702260-21704601:-|nuORF	39.021493756699265	0.6623843612266921	6				NaN	NaN	0	NaN	1730	2454	4183
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4187	15.682	NaN	2170.1	30	0	335.77	0.106	+			5029	ATSDPKQLSK	10	58	537.7935462812338	NaN	0	537.7933349609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATSDPKQLSK_	ENSG00000125821|ENST00000377452|DTD1	78.26377905018397	0.10800580676963668	6				NaN	NaN	0	NaN	1731	2454	4183
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4188	15.684	NaN	4888.3	30	0	1247.9	0.106	+			49356	VVSQTAVQ	8	48	416.232111373213	830.449669813226	2	416.2320251464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVSQTAVQ_	ENSG00000198793|ENST00000361445|MTOR;MTOR|p.F821Lfs*34|1|0.28|ENSG00000198793|chr1:11232487-11232487|A/-|frameshift_variant	37.15910966729921	0.6739408393984688	6				NaN	NaN	0	NaN	1732	2454	4183
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4189	15.686	NaN	6724.8	30	0	2289.1	0.032			+	13300	GKDGPAGAP	9	51	385.19566587674734	768.3767788202947	2	385.1954040527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GKDGPAGAP_	REV__COL1A1|p.G1181Afs*58|1|0.37|ENSG00000108821|chr17:50186914-50186914|G/-|frameshift_variant;REV__COL1A1|p.G809Afs*299|2|0.43|ENSG00000108821|chr17:50190354-50190354|G/-|frameshift_variant;REV__ENSG00000108821|ENST00000225964|COL1A1	24.20275056022122	0.577060078256802	6				NaN	NaN	0	NaN	1733	2454	4183
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4190	15.686	NaN	2795.6	30	0	228.64	0.139	+			40968	SVGESSSKGP	10	60	467.72661544569434	933.4386779581887	2	467.76898193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVGESSSKGP_	CON__P13645;ENSG00000186395|ENST00000269576|KRT10	65.15724298150197	0.31893571707528906	6				NaN	NaN	0	NaN	1734	2454	4183
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4209	15.724	NaN	354470	30	0	38280	0.214			+	-1	TCNGRQFERCV	11	125	457.2076696164413	1368.601179449524	3	457.2076721191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_TCNGRQFERC(Carbamidomethyl (C))V_	REV__ENSG00000076770|ENST00000370853|MBNL3;REV__nc|ENSG00000076770|Q9NUK0-2|MBNL3;REV__nc|ENSG00000076770|Q9NUK0-3|MBNL3;REV__nc|ENSG00000076770|Q9NUK0-4|MBNL3;REV__nc|ENSG00000076770|Q9NUK0-5|MBNL3	36.527901853580055	0.6054519527965578	6				NaN	NaN	0	NaN	1750	2457	4208
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4210	15.728	NaN	6904.2	30	0	820.79	0.106	+			40981	SVGKNLASK	9	61	452.2664081275106	902.5182633218212	2	452.26617431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVGKNLASK_	ENSG00000137642|ENST00000260197|SORL1;ENST00000532451.1_1_11:121323091-121416136:+|nuORF;SORL1|p.F2103Lfs*44|1|0.22|ENSG00000137642|chr11:121625218-121625218|T/-|frameshift_variant;SORL1|p.M1581Cfs*34|2|0.28|ENSG00000137642|chr11:121605196-121605196|A/-|frameshift_variant	76.16968421966216	0.11411088698345859	6				NaN	NaN	0	NaN	1751	2457	4208
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4211	15.73	NaN	2325.8	30	0	478.78	0.106	+			16332	HEKQESQDL	9	61	557.2619115394843	1112.5092701457686	2	557.2625732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HEKQESQDL_	ENSG00000137804|ENST00000559596|NUSAP1;ENST00000558123.5_1_15:41625112-41672381:+|nuORF;nc|ENSG00000137804|Q9BXS6-2|NUSAP1;nc|ENSG00000137804|Q9BXS6-3|NUSAP1;nc|ENSG00000137804|Q9BXS6-4|NUSAP1;nc|ENSG00000137804|Q9BXS6-5|NUSAP1;nc|ENSG00000137804|Q9BXS6-6|NUSAP1;nc|ENSG00000137804|Q9BXS6-7|NUSAP1	49.536043120802724	0.308405419312776	6				NaN	NaN	0	NaN	1752	2457	4208
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4212	15.732	NaN	2478.6	30	0	361.84	0.106	+			45332	TVSGNTDIQ	9	61	467.72661544569434	933.4386779581887	2	467.72540283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TVSGNTDIQ_	CCDC14|p.E558Rfs*13|1|0.03|ENSG00000175455|chr3:123931229-123931230|-/T|frameshift_variant;CCDC14|p.E558Vfs*7|1|0.04|ENSG00000175455|chr3:123931228-123931229|-/TTGAATAA|frameshift_variant;CCDC14|p.V615Afs*13|1|0.05|ENSG00000175455|chr3:123915674-123915675|-/TAATGAG|frameshift_variant;ENSG00000175455|ENST00000409697|CCDC14;ENST00000485949.5_1_3:123652514-123665686:-|nuORF;ENST00000495381.5_1_3:123633936-123674711:-|nuORF;nc|ENSG00000175455|Q49A88-2|CCDC14;nc|ENSG00000175455|Q49A88-3|CCDC14;nc|ENSG00000175455|Q49A88-4|CCDC14;nc|ENSG00000175455|Q49A88-5|CCDC14;nc|ENSG00000175455|Q49A88-6|CCDC14;nc|ENSG00000175455|Q49A88|CCDC14	60.11826168202944	0.21262886028301267	6				NaN	NaN	0	NaN	1753	2457	4208
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4213	15.734	NaN	2038.5	30	0	1078.4	0.106	+			30131	PRSLDSLIR	9	34	528.8116330217255	NaN	0	528.8115844726562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PRSLDSLIR_	ENST00000266269.9_2_22:31741609-31741828:-|nuORF	26.69291269510374	0.34280015626154364	6				NaN	NaN	0	NaN	1754	2457	4208
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4214	15.735	NaN	1058.5	30	0	63.526	0.034				-1	TSGRKCVL	8	47	460.7535095214844	NaN	0	460.7535095214844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_TSGRKC(Carbamidomethyl (C))VL_	ENST00000538077.2_1_13:111521866-111521998:-|nuORF	24.20275056022122	1.7418937515398478	6				NaN	NaN	0	NaN	1755	2457	4208
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4215	15.736	NaN	4096.6	30	0	1500.2	0.142	+			15012	GTNDGPALKK	10	34	334.1855010087045	999.5346736263134	3	334.1854553222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GTNDGPALKK_	ENSG00000058668|ENST00000357681|ATP2B4;ENSG00000067842|ENST00000263519|ATP2B3;ENSG00000070961|ENST00000428670|ATP2B1;ENSG00000157087|ENST00000360273|ATP2B2;ENST00000551009.5_1_12:89997895-90004207:-|nuORF;nc|ENSG00000058668|P23634-2|ATP2B4;nc|ENSG00000058668|P23634-3|ATP2B4;nc|ENSG00000058668|P23634-4|ATP2B4;nc|ENSG00000058668|P23634-5|ATP2B4;nc|ENSG00000058668|P23634-7|ATP2B4;nc|ENSG00000058668|P23634-8|ATP2B4;nc|ENSG00000058668|P23634|ATP2B4;nc|ENSG00000067842|Q16720-2|ATP2B3;nc|ENSG00000067842|Q16720-3|ATP2B3;nc|ENSG00000067842|Q16720-4|ATP2B3;nc|ENSG00000067842|Q16720-5|ATP2B3;nc|ENSG00000067842|Q16720-6|ATP2B3;nc|ENSG00000067842|Q16720-7|ATP2B3;nc|ENSG00000067842|Q16720-8|ATP2B3;nc|ENSG00000070961|P20020-1|ATP2B1;nc|ENSG00000070961|P20020-2|ATP2B1;nc|ENSG00000070961|P20020-4|ATP2B1;nc|ENSG00000070961|P20020-5|ATP2B1;nc|ENSG00000070961|P20020-6|ATP2B1;nc|ENSG00000157087|Q01814-2|ATP2B2;nc|ENSG00000157087|Q01814-3|ATP2B2;nc|ENSG00000157087|Q01814-4|ATP2B2;nc|ENSG00000157087|Q01814-5|ATP2B2;nc|ENSG00000157087|Q01814-6|ATP2B2;nc|ENSG00000157087|Q01814-7|ATP2B2;nc|ENSG00000157087|Q01814-8|ATP2B2	30.317721548370564	0.6322445173429027	6				NaN	NaN	0	NaN	1756	2457	4208
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4233	15.774	NaN	11355	30	0	5903.7	0.214	+			17138	HSSGPMVEK	9	71	486.23427539529223	970.4539978573845	2	486.2341003417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HSSGPMVEK_	ENSG00000069509|ENST00000378045|FUNDC1;ENST00000483115.1_1_X:44383446-44401387:-|nuORF;FUNDC1|p.F37C|1|0.33|ENSG00000069509|chrX:44542020-44542020|A/C|missense_variant	109.47833844074708	0.029530294723441826	6				NaN	NaN	0	NaN	1771	2460	4232
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4234	15.777	NaN	3010.1	30	0	710.31	0.106	+			4718	ATMATSGSAR	10	54	476.7291520694045	NaN	0	476.7291259765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATMATSGSAR_	ENSG00000141543|ENST00000649764|EIF4A3;ENST00000575957.1_1_17:78115565-78120760:-|nuORF	114.8945686534367	0.0172778173622391	6				NaN	NaN	0	NaN	1772	2460	4232
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4235	15.779	NaN	2624.4	30	0	556.03	0.106	+			41164	SVKLYRRE	8	42	350.8732664890725	1049.5979700674175	3	351.2107849121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVKLYRRE_	ENSG00000198554|ENST00000360586|WDHD1;nc|ENSG00000198554|O75717-2|WDHD1;WDHD1|p.K611Lfs*83|1|0.08|ENSG00000198554|chr14:54984798-54984799|-/AAAAAAAACAAGTATAA|frameshift_variant;WDHD1|p.L485Nfs*20|1|0.06|ENSG00000198554|chr14:54989101-54989102|-/GATTATT|frameshift_variant;WDHD1|p.R429Gfs*38|1|0.25|ENSG00000198554|chr14:54991269-54991269|G/-|frameshift_variant	25.450171626174864	0.7628259754767981	6				NaN	NaN	0	NaN	1773	2460	4232
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4236	15.781	NaN	2969.1	30	0	322.15	0.106	+			242	AAMKGNSTLK	10	58	510.77891891364044	NaN	0	510.7789306640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AAMKGNSTLK_	ENSG00000132128|ENST00000617190|LRRC41;nc|ENSG00000132128|Q15345-3|LRRC41	68.62578634547417	0.1638387020055689	6				NaN	NaN	0	NaN	1774	2460	4232
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4237	15.783	NaN	6806.6	30	0	1937.7	0.106			+	-1	SLFCIRKCINP	11	69	450.90519192513904	1349.6937463756171	3	450.9050598144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_SLFC(Carbamidomethyl (C))IRKCINP_	REV__ENSG00000196600|ENST00000306494|SLC22A25	25.891714612410027	0.7182082266701849	6				NaN	NaN	0	NaN	1775	2460	4232
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4238	15.785	NaN	5553.7	30	0	714.43	0.033			+	16019	HASSPHAGV	9	65	431.71181696250034	861.4090809918007	2	431.71173095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HASSPHAGV_	REV__ENST00000247668.6_1_9:139820478-139821042:+|nuORF	42.47446043378293	0.39123495718708534	6				NaN	NaN	0	NaN	1776	2460	4232
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4239	15.785	NaN	2228.6	30	0	427.03	0.141			+	22301	KTENKKVK	8	41	325.5376892089844	NaN	0	325.5376892089844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KTENKKVK_	REV__ENSG00000099290|ENST00000282633|WASHC2A;REV__ENSG00000172661|ENST00000623400|WASHC2C;REV__nc|ENSG00000099290|Q641Q2-2|WASHC2A;REV__nc|ENSG00000172661|Q9Y4E1-1|WASHC2C;REV__nc|ENSG00000172661|Q9Y4E1-2|WASHC2C;REV__nc|ENSG00000172661|Q9Y4E1-3|WASHC2C;REV__nc|ENSG00000172661|Q9Y4E1-4|WASHC2C;REV__nc|ENSG00000172661|Q9Y4E1-5|WASHC2C;REV__nc|ENSG00000172661|Q9Y4E1-6|WASHC2C	34.172542307311794	1.7418937515398478	6				NaN	NaN	0	NaN	1777	2460	4232
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4257	15.825	NaN	5956.9	30	0	1958.4	0.214	+			41005	SVGSASSVK	9	53	411.2217270717447	820.4289012102894	2	411.2216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVGSASSVK_	ENSG00000144840|ENST00000273375|RABL3	85.16082228582465	0.07850854922700509	6				NaN	NaN	0	NaN	1792	2463	4256
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4258	15.828	NaN	6964	30	0	1408.4	0.106			+	-1	KVCTGPKSAV	10	73	523.7854051989382	1045.5562574646763	2	523.7857055664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_KVC(Carbamidomethyl (C))TGPKSAV_	REV__ABTB1|p.E252Sfs*102|1|0.29|ENSG00000114626|chr3:127677272-127677272|C/-|frameshift_variant;REV__ABTB1|p.P318Qfs*36|2|0.4|ENSG00000114626|chr3:127677762-127677762|C/-|frameshift_variant;REV__ENSG00000114626|ENST00000232744|ABTB1;REV__nc|ENSG00000114626|Q969K4-2|ABTB1;REV__nc|ENSG00000114626|Q969K4-3|ABTB1;REV__nc|ENSG00000114626|Q969K4-4|ABTB1	64.20726635412375	0.3275756395432415	6				NaN	NaN	0	NaN	1793	2463	4256
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4259	15.831	NaN	19005	30	0	2854.2	0.106	+			6470	AVYKTHVEK	9	81	537.800941646135	1073.58733035907	2	537.8012084960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVYKTHVEK_	ENSG00000196954|ENST00000444739|CASP4;ENST00000529565.1_1_11:104819221-104819389:-|nuORF;ENST00000534356.1_1_11:104817674-104819389:-|nuORF;nc|ENSG00000196954|P49662-2|CASP4	134.7655990226056	0.012935733000282069	6				NaN	NaN	0	NaN	1794	2463	4256
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4260	15.832	NaN	2195.4	30	0	308.81	0.106	+			34280	RTKSVDALK	9	58	509.30621680656793	1016.5978806799359	2	509.30645751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RTKSVDALK_	ENSG00000101161|ENST00000266079|PRPF6;nc|ENSG00000101161|O94906-2|PRPF6	65.46538089061403	0.16805504838372562	6				NaN	NaN	0	NaN	1795	2463	4256
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4261	15.834	NaN	22346	30	0	4321.8	0.106	+			41749	SVSKNVNVK	9	80	487.7851482273535	973.555743521507	2	487.7847595214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVSKNVNVK_	ENSG00000198589|ENST00000651943|LRBA;LRBA|p.L2590*|1|0.41|ENSG00000198589|chr4:150310342-150310342|A/-|frameshift_variant;LRBA|p.T2011Qfs*11|1|0.19|ENSG00000198589|chr4:150599022-150599022|T/-|frameshift_variant;nc|ENSG00000198589|P50851-2|LRBA;nc|ENSG00000198589|P50851|LRBA	163.1509380574825	0.003936019289634439	6				NaN	NaN	0	NaN	1796	2463	4256
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4262	15.836	NaN	1746.5	30	0	214.52	0.035			+	35169	SAIEARVKQ	9	49	501.29111268324783	1000.5676724332957	2	501.29058837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SAIEARVKQ_	REV__ENSG00000113141|ENST00000417647|IK;REV__ENST00000434096.1_1_2:58688403-58689123:-|nuORF;REV__IK|p.L170R|1|0.35|ENSG00000113141|chr5:140654042-140654042|T/G|missense_variant;REV__IK|p.M189Rfs*54|1|0.04|ENSG00000113141|chr5:140654559-140654560|-/AA|frameshift_variant	65.46538089061403	0.16805504838372562	6				NaN	NaN	0	NaN	1797	2463	4256
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4263	15.837	NaN	6678.1	30	0	1708.5	0.14	+			34403	RTSIPVHSK	9	64	512.7984002400668	1023.5822475469337	2	512.798583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RTSIPVHSK_	ENSG00000092439|ENST00000646667|TRPM7;ENST00000560849.2_2_15:50868060-50878706:-|nuORF	90.14881205920913	0.06444578693273594	6				NaN	NaN	0	NaN	1798	2463	4256
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4281	15.875	NaN	273650	30	0	54617	0.125	+			39065	SSSRAVVVK	9	72	466.7797024480071	931.5448519628142	2	466.7794189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSSRAVVVK_	CON__H-INV:HIT000292931;CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	79.71258880314673	0.09879134589249085	6				NaN	NaN	0	NaN	1813	2466	4280
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4282	15.877	NaN	5074.7	30	0	1914	0.106	+			2491	APRVARPGM	9	55	477.77079417906486	953.5270354249297	2	477.77056884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_APRVARPGM_	ENST00000340648.5_1_21:45079492-45079627:+|nuORF	23.04248740728303	0.5879033540491928	6				NaN	NaN	0	NaN	1814	2466	4280
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4283	15.879	NaN	2869.5	30	0	683.07	0.106			+	-1	SGVLMKWE	8	32	322.4981720763781	NaN	0	322.4981689453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_SGVLM(Oxidation (M))KWE_	REV__ENST00000529938.1_1_11:112161989-112162265:+|nuORF;REV__ENST00000532168.2_1_11:112151431-112162265:+|nuORF	30.503639358989545	1.7418937515398478	6				NaN	NaN	0	NaN	1815	2466	4280
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4284	15.881	NaN	2399.4	30	0	288.98	0.106			+	47815	VSKGRMVEV	9	58	502.77995028100725	NaN	0	502.7799987792969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSKGRMVEV_	REV__BCAM|p.G576Afs*20|1|0.34|ENSG00000187244|chr19:44819686-44819686|G/-|frameshift_variant;REV__BCAM|p.N155Kfs*76|1|0.13|ENSG00000187244|chr19:44812506-44812507|-/A|frameshift_variant;REV__ENSG00000187244|ENST00000270233|BCAM;REV__ENST00000588303.1_1_19:45312375-45314729:+|nuORF	71.87747018426188	0.0992163553043454	6				NaN	NaN	0	NaN	1816	2466	4280
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4285	15.882	NaN	5367	30	0	696.67	0.106			+	50014	WCCADYPFIVL	11	62	481.8865953437638	1442.6379566314915	3	481.8866882324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C)	_WC(Carbamidomethyl (C))C(Carbamidomethyl (C))ADYPFIVL_	REV__ENST00000383746.7_2_3:44399709-44399838:+|nuORF	53.08895987439943	0.38514566451266113	6				NaN	NaN	0	NaN	1817	2466	4280
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4286	15.884	NaN	1662.6	30	0	444.51	0.106			+	-1	VNLYMLKK	8	41	342.2013854980469	NaN	0	342.2013854980469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_VNLYM(Oxidation (M))LKK_	REV__NLRP4|p.T754M|1|0.2|ENSG00000160505|chr19:55867783-55867783|C/T|missense_variant	30.503639358989545	1.7418937515398478	6				NaN	NaN	0	NaN	1818	2466	4280
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4287	15.886	NaN	6622	30	0	1314.7	0.034				-1	SVACPGAQK	9	57	459.22903784737093	916.4435227615419	2	459.228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_SVAC(Carbamidomethyl (C))PGAQK_	ENSG00000127993|ENST00000265732|RBM48;nc|ENSG00000127993|Q5RL73-2|RBM48	74.25504064058377	0.12238981753128622	6				NaN	NaN	0	NaN	1819	2466	4280
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4305	15.924	NaN	246840	30	0	44232	0.214	+			6335	AVTKYTSAK	9	129	484.77505198811224	967.5355510430245	2	484.7738952636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVTKYTSAK_	ENSG00000124635|ENST00000339812|H2BC11;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000234289|ENST00000599962|H2BC12L	209.21039097705471	5.5375157516244266E-08	6				NaN	NaN	0	NaN	1834	2469	4304
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4306	15.927	NaN	33203	30	0	9268.8	0.106	+			42347	TAHDQKTAL	9	77	492.75918553525815	983.5038181373163	2	492.7587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAHDQKTAL_	ENSG00000142875|ENST00000370685|PRKACB	145.15565482312357	0.00806134135205793	6				NaN	NaN	0	NaN	1835	2469	4304
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4307	15.929	NaN	99863	30	0	14773	0.106	+			6351	AVTRTTPVK	9	108	486.79566530577506	971.5767776783501	2	486.79522705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVTRTTPVK_	ENST00000395472.2_1_14:55494079-55509730:+|nuORF;ENST00000553735.1_1_14:55494079-55498700:+|nuORF;ENST00000555846.1_1_14:55494079-55498626:+|nuORF	85.86182877749512	0.07653218437724067	6				NaN	NaN	0	NaN	1836	2469	4304
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4308	15.931	NaN	104910	30	0	41079	0.106	+			40710	SVCEGKGLHR	10	84	381.52950096176266	1141.566673485488	3	381.5292663574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_SVC(Carbamidomethyl (C))EGKGLHR_	ENSG00000161011|ENST00000389805|SQSTM1;ENST00000466342.1_1_5:179250916-179260288:+|nuORF;nc|ENSG00000161011|Q13501-2|SQSTM1	80.91624569148213	0.18813531420570515	6				NaN	NaN	0	NaN	1837	2469	4304
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4309	15.933	NaN	11244	30	0	5450.2	0.106	+			22816	KVFNQPKAK	9	66	353.88187731956134	1058.623802558884	3	353.8817443847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KVFNQPKAK_	CKAP5|p.K1126Rfs*25|1|0.46|ENSG00000175216|chr11:46767609-46767609|T/-|frameshift_variant;CKAP5|p.V1971Lfs*42|1|0.03|ENSG00000175216|chr11:46744211-46744212|-/TTGAAAAAAAG|frameshift_variant;ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5	71.29570347882199	0.13518600952103718	6				NaN	NaN	0	NaN	1838	2469	4304
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4310	15.935	NaN	5172.2	30	0	903.78	0.035	+			28362	NEKSDTHTL	9	60	522.7517733544593	1043.4889937757184	2	522.751708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NEKSDTHTL_	ENSG00000116237|ENST00000343813|ICMT	112.41091882917199	0.026537921851008135	6				NaN	NaN	0	NaN	1839	2469	4304
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4311	15.935	NaN	4025.7	30	0	1334	0.144			+	-1	ASFTVMELR	9	36	357.18438720703125	NaN	0	357.18438720703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_ASFTVM(Oxidation (M))ELR_	REV__ENST00000464585.1_1_3:51741837-51742137:+|nuORF	34.172542307311794	0.30503706118289736	6				NaN	NaN	0	NaN	1840	2469	4304
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4329	15.973	NaN	7766.3	30	0	2100.6	0.214	+			44937	TVAPTTANK	9	67	451.750915015313	901.487277097426	2	451.7507019042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVAPTTANK_	ENSG00000116260|ENST00000367602|QSOX1;nc|ENSG00000116260|O00391-2|QSOX1;QSOX1|p.S469Vfs*117|1|0.35|ENSG00000116260|chr1:180194325-180194325|G/-|frameshift_variant	77.31757898189308	0.1091473830098891	6				NaN	NaN	0	NaN	1855	2472	4328
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4330	15.976	NaN	33972	30	0	7636.1	0.106	+			27856	MTGSSAPCK	9	73	441.1963198026428	880.3780866720856	2	441.1965026855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MTGSSAPCK_	ENST00000392001.6_1_2:238499129-238499162:-|nuORF	124.08010499294276	0.018729767491916592	6				NaN	NaN	0	NaN	1856	2472	4328
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4331	15.979	NaN	76897	30	0	6676.6	0.106	+			1056	AEKREHEKEVL	11	99	456.58090469899423	1366.7208846971828	3	456.58087158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEKREHEKEVL_	ENSG00000117632|ENST00000455785|STMN1;ENST00000465604.1_1_1:26227509-26228203:-|nuORF;ENST00000485226.1_1_1:26227942-26230296:-|nuORF;nc|ENSG00000117632|P16949-2|STMN1	77.53327743719008	0.17293716712445248	6				NaN	NaN	0	NaN	1857	2472	4328
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4332	15.98	NaN	6552.6	30	0	904.86	0.106	+			11593	FPRQIVSN	8	70	480.7650909713596	NaN	0	480.76519775390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FPRQIVSN_	ENSG00000150637|ENST00000582621|CD226	47.91560031466742	1.7418937515398478	6				NaN	NaN	0	NaN	1858	2472	4328
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4333	15.982	NaN	18344	30	0	5393.1	0.106	+			36969	SIMEKKMKTK	10	67	408.5667233219961	1222.6783405661884	3	408.566650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SIMEKKMKTK_	ENSG00000115267|ENST00000649979|IFIH1	79.48907831485694	0.19979514868675113	6				NaN	NaN	0	NaN	1859	2472	4328
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4334	15.984	NaN	6541	30	0	877.12	0.033	+			26247	LSSRTPVL	8	63	436.76378530254	NaN	0	436.7637634277344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSSRTPVL_	ENSG00000134313|ENST00000256707|KIDINS220;ENST00000488729.5_1_2:8870852-8965899:-|nuORF;KIDINS220|p.K1581Rfs*8|1|0.28|ENSG00000134313|chr2:8731294-8731294|T/-|frameshift_variant;KIDINS220|p.P1081Rfs*48|1|0.22|ENSG00000134313|chr2:8750284-8750284|G/-|frameshift_variant;KIDINS220|p.R1551Efs*38|1|0.08|ENSG00000134313|chr2:8731386-8731386|C/-|frameshift_variant;nc|ENSG00000134313|Q9ULH0-2|KIDINS220;nc|ENSG00000134313|Q9ULH0-4|KIDINS220	76.7741389293348	1.7418937515398478	6				NaN	NaN	0	NaN	1860	2472	4328
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4335	15.985	NaN	911.19	30	0	194.93	0.142	+			26031	LSLGFLEKK	9	35	345.5477302162765	NaN	0	345.2135009765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSLGFLEKK_	ENSG00000112159|ENST00000369393|MDN1;MDN1|p.L4077Cfs*15|1|0.16|ENSG00000112159|chr6:89680625-89680625|G/-|frameshift_variant;MDN1|p.L5278Ffs*6|1|0.18|ENSG00000112159|chr6:89652273-89652274|-/A|frameshift_variant	16.473147378115264	0.38122769658151995	6				NaN	NaN	0	NaN	1861	2472	4328
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4353	16.024	NaN	2939.4	30	0	895.34	0.214			+	37168	SIVTAWAAGAI	11	51	530.2939465573821	NaN	0	530.2938842773438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIVTAWAAGAI_	REV__tr|U7SU85|U7SU85_FUSNUMultidrugexportproteinMepAOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01059PE=3SV=1	42.396135135203025	0.3699325281549567	6				NaN	NaN	0	NaN	1876	2475	4352
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4354	16.028	NaN	4277.7	30	0	801.7	0.106	+			34974	SAAPPACQK	9	53	436.71861485068337	871.4226767681668	2	436.71820068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAAPPACQK_	ENSG00000174938|ENST00000617533|SEZ6L2;nc|ENSG00000174938|Q6UXD5-2|SEZ6L2;nc|ENSG00000174938|Q6UXD5-3|SEZ6L2;nc|ENSG00000174938|Q6UXD5-5|SEZ6L2;nc|ENSG00000174938|Q6UXD5-6|SEZ6L2;nc|ENSG00000174938|Q6UXD5|SEZ6L2	51.33545320467046	0.2872990594074956	6				NaN	NaN	0	NaN	1877	2475	4352
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4355	16.03	NaN	10591	30	0	1391.6	0.106	+			35679	SDGLAKNLNK	10	70	353.8648272941547	1058.5726524826641	3	354.5486755371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SDGLAKNLNK_	ARHGAP29|p.G358D|1|0.14|ENSG00000137962|chr1:94202614-94202614|C/T|missense_variant	37.81151784470057	0.569310847604193	6				NaN	NaN	0	NaN	1878	2475	4352
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4356	16.032	NaN	5952.9	30	0	1362.3	0.106			+	3809	ATAGLLQQ	8	60	401.2270474027051	800.4395418722103	2	401.2269287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATAGLLQQ_	REV__ATP8B3|p.T1172Rfs*12|1|0.27|ENSG00000130270|chr19:1785178-1785178|G/-|frameshift_variant;REV__ENSG00000130270|ENST00000310127|ATP8B3	47.91560031466742	0.6071945918984287	6				NaN	NaN	0	NaN	1879	2475	4352
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4357	16.033	NaN	10285	30	0	4743.6	0.106			+	26085	LSMLKPCL	8	65	452.7538604978944	903.4931680625888	2	452.7536315917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSMLKPCL_	REV__ENST00000376621.7_1_6:30513189-30513468:-|nuORF	45.9519527083369	0.6193794311207887	6				NaN	NaN	0	NaN	1880	2475	4352
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4358	16.035	NaN	2730.7	30	0	228.84	0.033			+	24334	LFKVDPGS	8	62	431.73494993490107	NaN	0	431.7350158691406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LFKVDPGS_	REV__ENST00000229340.9_1_12:120532979-120533294:-|nuORF	53.351449002276354	1.7418937515398478	6				NaN	NaN	0	NaN	1881	2475	4352
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4359	16.036	NaN	3076.3	30	0	581.11	0.139	+			34246	RTGPPMGSR	9	59	479.7478671316952	957.4811813301905	2	479.7478942871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RTGPPMGSR_	ENSG00000106682|ENST00000265753|EIF4H;nc|ENSG00000106682|Q15056-2|EIF4H	47.95952297671804	0.32689736945648856	6				NaN	NaN	0	NaN	1882	2475	4352
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4377	16.073	NaN	3236.1	30	0	896.19	0.214	+			34572	RVMEKGSLK	9	57	524.3036422678135	NaN	0	524.3035888671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVMEKGSLK_	ENSG00000196396|ENST00000371621|PTPN1;PTPN1|p.G377Efs*27|2|0.27|ENSG00000196396|chr20:50581301-50581301|G/-|frameshift_variant	139.38205640894643	0.0006369592967246767	6				NaN	NaN	0	NaN	1897	2478	4376
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4378	16.077	NaN	26864	30	0	5880.2	0.106	+			45341	TVSKILHHK	9	72	354.88538487632445	1061.6343252291733	3	354.8855285644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVSKILHHK_	CFTR|p.E1044Dfs*20|1|0.04|ENSG00000001626|chr7:117610661-117610662|-/TCAAAGAAAAC|frameshift_variant;CFTR|p.G1208Afs*3|1|0.3|ENSG00000001626|chr7:117627672-117627672|G/-|frameshift_variant;CFTR|p.L1258Ffs*7|1|0.26|ENSG00000001626|chr7:117642487-117642488|-/T|frameshift_variant;CFTR|p.S1297Lfs*31|1|0.28|ENSG00000001626|chr7:117652852-117652852|T/-|frameshift_variant;ENSG00000001626|ENST00000003084|CFTR;nc|ENSG00000001626|P13569-2|CFTR	56.72105179125745	0.24094814563026265	6				NaN	NaN	0	NaN	1898	2478	4376
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4379	16.079	NaN	13166	30	0	1862.6	0.106			+	11761	FSKGNIPNTI	10	62	364.2013363267638	1089.5821795804914	3	364.2014465332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FSKGNIPNTI_	REV__ENSG00000197081|ENST00000356956|IGF2R;REV__IGF2R|p.D2163Tfs*2|1|0.16|ENSG00000197081|chr6:160089932-160089932|G/-|frameshift_variant;REV__IGF2R|p.G2426Efs*10|1|0.25|ENSG00000197081|chr6:160104882-160104882|G/-|frameshift_variant	47.657333605630114	0.47858658696240314	6				NaN	NaN	0	NaN	1899	2478	4376
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4380	16.081	NaN	1062.4	30	0	470.54	0.106			+	41954	SVVTSIKKK	9	29	330.55023193359375	NaN	0	330.55023193359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVVTSIKKK_	REV__ENSG00000140319|ENST00000267884|SRP14	14.137123925751023	0.3891339986947948	6				NaN	NaN	0	NaN	1900	2478	4376
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4381	16.083	NaN	973.69	30	0	156.64	0.106			+	12218	GARPHPGV	8	43	395.7189835429494	NaN	0	395.718994140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GARPHPGV_	REV__ENST00000547411.1_1_12:29302213-29449968:+|nuORF;REV__ENST00000549080.1_1_12:29302213-29324360:+|nuORF;REV__ENST00000551451.5_1_12:29302213-29446237:+|nuORF	44.53106598305862	1.7418937515398478	6				NaN	NaN	0	NaN	1901	2478	4376
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4382	16.085	NaN	2766.4	30	0	450.43	0.035				-1	 	0	59	502.77309200915	1003.5316310851	2	502.77288818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1902	2478	4376
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4383	16.085	NaN	1775.2	30	0	144.08	0.139	+			32167	QSRDSPQV	8	66	458.72772761121473	915.4409022892295	2	458.7828674316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QSRDSPQV_	ENST00000587238.5_1_19:19752858-19754364:-|nuORF;ENST00000591047.1_1_19:19749271-19754364:-|nuORF	53.351449002276354	0.5676011784961348	6				NaN	NaN	0	NaN	1903	2478	4376
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4401	16.125	NaN	77709	30	0	21988	0.214	+			22934	KVQDVKKTIQK	11	104	438.9416765273491	1313.8032001822473	3	438.94140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVQDVKKTIQK_	ENSG00000133706|ENST00000394434|LARS1;ENST00000508667.5_1_5:145522961-145531505:-|nuORF;nc|ENSG00000133706|Q9P2J5-2|LARS1	104.42354056486148	0.051542069836817306	6				NaN	NaN	0	NaN	1918	2481	4400
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4402	16.128	NaN	8492.2	30	0	1318.8	0.106	+			4095	ATDPKAIGH	9	68	455.2430744997729	908.4715960663458	2	455.24285888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATDPKAIGH_	ENSG00000117410|ENST00000472174|ATP6V0B;ENST00000496131.1_1_1:44442124-44442513:+|nuORF;nc|ENSG00000117410|Q99437-2|ATP6V0B	93.19546047674547	0.05585629608842056	6				NaN	NaN	0	NaN	1919	2481	4400
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4403	16.13	NaN	28343	30	0	5321.3	0.106	+			4549	ATLDKHLRQK	10	105	403.90674966448665	NaN	0	403.90679931640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATLDKHLRQK_	ENSG00000170684|ENST00000303809|ZNF296	78.26377905018397	0.10800580676963668	6				NaN	NaN	0	NaN	1920	2481	4400
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4404	16.132	NaN	2232.3	30	0	243.15	0.106	+			12964	GETESKRAL	9	56	495.7642517089844	NaN	0	495.7642517089844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GETESKRAL_	ENSG00000197321|ENST00000355867|SVIL;nc|ENSG00000197321|O95425-2|SVIL;nc|ENSG00000197321|O95425-3|SVIL;nc|ENSG00000197321|O95425-4|SVIL;SVIL|p.M1863Dfs*18|1|0.28|ENSG00000197321|chr10:29471186-29471187|-/C|frameshift_variant;SVIL|p.M1863Wfs*44|8|0.39|ENSG00000197321|chr10:29471187-29471187|C/-|frameshift_variant;SVIL|p.N2095Kfs*36|1|0.25|ENSG00000197321|chr10:29462394-29462395|-/T|frameshift_variant	96.19043198914106	0.029117245125711146	6				NaN	NaN	0	NaN	1921	2481	4400
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4405	16.134	NaN	1622.8	30	0	265.52	0.106			+	15576	GVGPYFPP	8	47	417.2125874687909	832.4106220043818	2	417.2124938964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GVGPYFPP_	REV__nc|ENSG00000140299|Q12982-2|BNIP2	33.49298260027079	0.7007254697536482	6				NaN	NaN	0	NaN	1922	2481	4400
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4406	16.136	NaN	817.38	30	0	342.45	0.037				-1	SRNLNCTALC	10	25	576.27001953125	NaN	0	576.27001953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_SRNLNC(Carbamidomethyl (C))TALC_	PARP6|p.I564T|1|0.18|ENSG00000137817|chr15:72242171-72242171|A/G|missense_variant	21.9598887501803	0.4201028297492154	6				NaN	NaN	0	NaN	1923	2481	4400
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4407	16.136	NaN	2224.5	30	0	447.36	0.141	+			49310	VVQTSLQA	8	50	423.23990461334915	844.4652562934983	2	423.2395935058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VVQTSLQA_	PCM1|p.D1817V|1|0.31|ENSG00000078674|chr8:18011766-18011766|A/T|missense_variant	47.91560031466742	0.6071945918984287	6				NaN	NaN	0	NaN	1924	2481	4400
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4425	16.176	NaN	11661	30	0	3033.7	0.215	+			29204	NVNEPATTK	9	65	487.2511006798646	972.4876484265292	2	487.25091552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NVNEPATTK_	ENSG00000116906|ENST00000366647|GNPAT;nc|ENSG00000116906|O15228-2|GNPAT	85.86182877749512	0.07653218437724067	6				NaN	NaN	0	NaN	1939	2484	4424
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4426	16.179	NaN	17062	30	0	2039.8	0.106	+			34191	RTCWETTKK	9	91	403.8730943517389	1208.5974536554168	3	403.8728942871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_RTC(Carbamidomethyl (C))WETTKK_	ENST00000504956.5_1_4:87869676-87967907:+|nuORF;ENST00000511442.1_2_4:87869713-87967910:+|nuORF	65.2775769800794	0.16962058972581526	6				NaN	NaN	0	NaN	1940	2484	4424
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4427	16.182	NaN	5143.8	30	0	1945.2	0.106			+	11934	FVGVTELVK	9	67	496.2926715439042	NaN	0	496.29266357421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FVGVTELVK_	REV__ENSG00000004142|ENST00000540200|POLDIP2	68.78682469695295	0.1118430353446351	6				NaN	NaN	0	NaN	1941	2484	4424
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4428	16.183	NaN	2771.3	30	0	326.3	0.106				-1	KSCDAAAAVAK	11	69	546.2787258334783	1090.5428987337566	2	546.279541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_KSC(Carbamidomethyl (C))DAAAAVAK_	CACUL1|p.K186Rfs*2|1|0.24|ENSG00000151893|chr10:118729335-118729335|T/-|frameshift_variant;ENSG00000151893|ENST00000369151|CACUL1;nc|ENSG00000151893|Q86Y37-2|CACUL1	75.65223720490533	0.18861880313260296	6				NaN	NaN	0	NaN	1942	2484	4424
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4429	16.185	NaN	7639.8	30	0	1813.3	0.106	+			41711	SVSDPGQAR	9	63	458.72772761121473	915.4409022892295	2	458.7274475097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVSDPGQAR_	nc|ENSG00000157800|Q8NCC5-3|SLC37A3	72.87924865735499	0.12833875048249987	6				NaN	NaN	0	NaN	1943	2484	4424
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4430	16.187	NaN	7092.6	30	0	4197	0.036	+			34591	RVMKALVNR	9	59	551.8294939818561	1101.644435030512	2	551.830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_RVM(Oxidation (M))KALVNR_	ENSG00000149136|ENST00000278412|SSRP1;ENST00000293880.9_1_11:57098199-57100416:-|nuORF	56.72105179125745	0.24094814563026265	6				NaN	NaN	0	NaN	1944	2484	4424
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4431	16.188	NaN	10171	30	0	2355.2	0.14	+			41782	SVSPVKATQK	10	69	522.8063025088883	1043.5980520845765	2	522.8068237304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVSPVKATQK_	ENSG00000139354|ENST00000547754|GAS2L3	128.60217544463768	0.01518043149187549	6				NaN	NaN	0	NaN	1945	2484	4424
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4449	16.227	NaN	235980	30	0	82326	0.214	+			41866	SVTGSAVSK	9	88	418.22950129078066	834.4444496483613	2	418.2294006347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVTGSAVSK_	ENSG00000073921|ENST00000393346|PICALM;nc|ENSG00000073921|Q13492-2|PICALM;nc|ENSG00000073921|Q13492-3|PICALM;nc|ENSG00000073921|Q13492-5|PICALM;PICALM|p.L275Gfs*3|1|0.14|ENSG00000073921|chr11:86003436-86003437|-/TTCC|frameshift_variant	143.37361013837676	0.008897369944672323	6				NaN	NaN	0	NaN	1960	2487	4448
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4450	16.231	NaN	9017.3	30	0	1234.1	0.106	+			40248	STSHVSISK	9	76	473.25342763354035	944.4923023338807	2	473.2530822753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STSHVSISK_	ENSG00000215182|ENST00000621226|MUC5AC;MUC5AC|p.R4729Efs*5|1|0.24|ENSG00000215182|chr11:1192325-1192325|C/-|frameshift_variant	126.24258497203832	0.01742065577488747	6				NaN	NaN	0	NaN	1961	2487	4448
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4451	16.233	NaN	4426.2	30	0	1330.1	0.106	+			22344	KTGHVIAVK	9	58	476.8003898238407	951.5862267144814	2	476.8001403808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KTGHVIAVK_	ENSG00000076984|ENST00000397979|MAP2K7;ENST00000468058.1_1_19:7975099-7977313:+|nuORF;ENST00000494348.1_1_19:7974966-7975513:+|nuORF;MAP2K7|p.P292Qfs*119|2|0.25|ENSG00000076984|chr19:7911264-7911264|C/-|frameshift_variant;nc|ENSG00000076984|O14733-2|MAP2K7;nc|ENSG00000076984|O14733-3|MAP2K7;nc|ENSG00000076984|O14733-4|MAP2K7	85.86182877749512	0.07653218437724067	6				NaN	NaN	0	NaN	1962	2487	4448
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4452	16.234	NaN	5518.5	30	0	608.26	0.106	+			40078	STNPKAALK	9	65	465.2744195558377	928.5342861784754	2	465.27447509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STNPKAALK_	ENSG00000163125|ENST00000369068|RPRD2;ENST00000492220.1_1_1:150381497-150445807:+|nuORF;nc|ENSG00000163125|Q5VT52-2|RPRD2;nc|ENSG00000163125|Q5VT52-3|RPRD2;nc|ENSG00000163125|Q5VT52-5|RPRD2;RPRD2|p.G1389Efs*24|1|0.39|ENSG00000163125|chr1:150473110-150473110|G/-|frameshift_variant;RPRD2|p.K249Sfs*6|1|0.36|ENSG00000163125|chr1:150446274-150446274|C/-|frameshift_variant;RPRD2|p.L1399Wfs*14|2|0.26|ENSG00000163125|chr1:150473136-150473136|C/-|frameshift_variant;RPRD2|p.P1275Lfs*138|1|0.15|ENSG00000163125|chr1:150472768-150472768|C/-|frameshift_variant;RPRD2|p.P733Hfs*4|1|0.43|ENSG00000163125|chr1:150471145-150471146|CC/-|frameshift_variant;RPRD2|p.P772Lfs*42|2|0.19|ENSG00000163125|chr1:150471259-150471259|C/-|frameshift_variant;RPRD2|p.T1353Pfs*60|1|0.13|ENSG00000163125|chr1:150473001-150473001|C/-|frameshift_variant	74.25504064058377	0.12238981753128622	6				NaN	NaN	0	NaN	1963	2487	4448
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4453	16.236	NaN	8089.4	30	0	1639.1	0.106				-1	VSCSLQRR	8	62	335.84676078878374	1004.5184529665512	3	335.8468017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_VSC(Carbamidomethyl (C))SLQRR_	ENST00000523500.5_2_8:27468087-27468141:-|nuORF	29.14955571784316	0.7342621283720113	6				NaN	NaN	0	NaN	1964	2487	4448
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4454	16.238	NaN	1814.2	30	0	321.51	0.038			+	17277	IAANLGSK	8	43	387.22989196288745	772.4452309925749	2	387.87554931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IAANLGSK_	REV__tr|U7SZP6|U7SZP6_FUSNUEthanolamineutilizationproteinEutLOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00823PE=4SV=1	25.450171626174864	0.7628259754767981	6				NaN	NaN	0	NaN	1965	2487	4448
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4455	16.239	NaN	4979.3	30	0	479.45	0.137			+	3986	ATAVAAVSQ	9	57	409.2247747958743	816.4349966585486	2	409.2246398925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATAVAAVSQ_	REV__ENST00000360254.3_1_1:223101833-223101902:+|nuORF	104.0567914643314	0.03506238181059741	6				NaN	NaN	0	NaN	1966	2487	4448
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4473	16.276	NaN	38693	30	0	9299.9	0.215	+			22953	KVQSKVNLK	9	83	522.3322889673975	1042.650025001595	2	522.3324584960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVQSKVNLK_	DYNC1H1|p.F2635Lfs*67|1|0.16|ENSG00000197102|chr14:102017141-102017141|T/-|frameshift_variant;DYNC1H1|p.G1902Vfs*27|2|0.27|ENSG00000197102|chr14:102006154-102006154|G/-|frameshift_variant;DYNC1H1|p.K3112Hfs*3|1|0.31|ENSG00000197102|chr14:102027998-102027999|-/TCACAAG|frameshift_variant;DYNC1H1|p.W4201Gfs*43|1|0.42|ENSG00000197102|chr14:102043958-102043958|G/-|frameshift_variant;ENSG00000197102|ENST00000360184|DYNC1H1	159.27591364854348	0.004707062175358555	6				NaN	NaN	0	NaN	1981	2490	4472
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4474	16.28	NaN	42568	30	0	5755.2	0.106	+			33116	RENAERLQ	8	90	508.2675793977088	1014.5206058622176	2	508.2675476074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RENAERLQ_	ENSG00000184408|ENST00000331113|KCND2;KCND2|p.A152T|1|0.29|ENSG00000184408|chr7:120275086-120275086|G/A|missense_variant;KCND2|p.R140H|1|0.3|ENSG00000184408|chr7:120275051-120275051|G/A|missense_variant;KCND2|p.T488Nfs*13|1|0.32|ENSG00000184408|chr7:120742591-120742592|-/A|frameshift_variant;KCND2|p.T537Lfs*40|1|0.42|ENSG00000184408|chr7:120745915-120745915|A/-|frameshift_variant	62.107414245175825	0.4809183816468817	6				NaN	NaN	0	NaN	1982	2490	4472
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4475	16.282	NaN	9799.5	30	0	3054.2	0.106			+	49082	VVKSLAEKK	9	58	334.54992670570994	1000.6279507173299	3	334.5498962402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVKSLAEKK_	REV__ENSG00000125351|ENST00000276201|UPF3B;REV__nc|ENSG00000125351|Q9BZI7-2|UPF3B;REV__UPF3B|p.S84Lfs*47|1|0.46|ENSG00000125351|chrX:119851780-119851780|A/-|frameshift_variant	47.91560031466742	0.327412564698279	6				NaN	NaN	0	NaN	1983	2490	4472
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4476	16.284	NaN	9198.7	30	0	1604.3	0.106			+	29626	PGASSSPPR	9	57	428.2196079468698	854.4246629605396	2	428.21942138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PGASSSPPR_	REV__ENST00000502100.2_1_5:25190936-25302336:+|nuORF	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	1984	2490	4472
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4477	16.286	NaN	6477.9	30	0	1378.8	0.106	+			36323	SESPGKTV	8	59	402.70859266356007	803.4026323939202	2	402.7084045410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SESPGKTV_	nc|ENSG00000211640|P01721|IGLV6-57	68.78682469695295	0.41700713582915416	6				NaN	NaN	0	NaN	1985	2490	4472
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4478	16.287	NaN	2018.5	30	0	200.77	0.035			+	9511	EKVRDVKQ	8	63	501.29050037541674	NaN	0	500.8292236328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EKVRDVKQ_	REV__ENST00000461096.6_1_1:109608842-109618580:-|nuORF	49.536043120802724	1.7418937515398478	6				NaN	NaN	0	NaN	1986	2490	4472
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4479	16.288	NaN	5104	30	0	631.62	0.144	+			34646	RVQEENARLK	10	64	414.9019862402516	NaN	0	414.9019775390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RVQEENARLK_	ENSG00000154305|ENST00000344922|MIA3;MIA3|p.P1645Yfs*19|1|0.06|ENSG00000154305|chr1:222659963-222659964|-/TATAG|frameshift_variant;nc|ENSG00000154305|Q5JRA6-4|MIA3	53.59686742100583	0.2828625612683223	6				NaN	NaN	0	NaN	1987	2490	4472
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4497	16.327	NaN	5089.6	30	0	595.78	0.214	+			19755	KDVSAANRL	9	64	487.2745728956544	NaN	0	487.274658203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KDVSAANRL_	MSC|p.E194D|1|0.33|ENSG00000178860|chr8:71842700-71842700|T/G|missense_variant	90.36981228632155	0.04085092656593507	6				NaN	NaN	0	NaN	2002	2493	4496
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4498	16.33	NaN	1453.1	30	0	231.34	0.106	+			22189	KSTAFPRTQ	9	58	518.2815738135671	1034.548594693934	2	518.2830200195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KSTAFPRTQ_	ENSG00000196159|ENST00000394329|FAT4;FAT4|p.A2521Sfs*37|1|0.11|ENSG00000196159|chr4:125448571-125448572|-/G|frameshift_variant;FAT4|p.D3606Sfs*31|1|0.07|ENSG00000196159|chr4:125451831-125451832|-/AGTAAAGG|frameshift_variant;FAT4|p.E3388Gfs*4|1|0.35|ENSG00000196159|chr4:125451179-125451179|A/-|frameshift_variant;FAT4|p.E4539Rfs*31|1|0.12|ENSG00000196159|chr4:125490431-125490431|C/-|frameshift_variant;FAT4|p.K4477Rfs*15|1|0.36|ENSG00000196159|chr4:125490247-125490247|G/-|frameshift_variant;FAT4|p.K4532Efs*21|1|0.37|ENSG00000196159|chr4:125490410-125490411|-/G|frameshift_variant;FAT4|p.K4532Rfs*38|1|0.19|ENSG00000196159|chr4:125490411-125490411|G/-|frameshift_variant;FAT4|p.L3734Ffs*22|1|0.27|ENSG00000196159|chr4:125452211-125452212|-/T|frameshift_variant;FAT4|p.L3734Yfs*8|2|0.3|ENSG00000196159|chr4:125452212-125452212|T/-|frameshift_variant;FAT4|p.Q4906Rfs*14|1|0.49|ENSG00000196159|chr4:125491536-125491536|C/-|frameshift_variant;FAT4|p.T3555Pfs*6|1|0.21|ENSG00000196159|chr4:125451679-125451679|A/-|frameshift_variant;nc|ENSG00000196159|Q6V0I7-3|FAT4;nc|ENSG00000196159|Q6V0I7|FAT4	40.05817265558897	0.419577045485086	6				NaN	NaN	0	NaN	2003	2493	4496
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4499	16.332	NaN	26464	30	0	6913.8	0.106			+	12204	GAQKWQNQIKK	11	69	443.5858810917533	1327.73581387546	3	443.5855407714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GAQKWQNQIKK_	REV__ENSG00000134240|ENST00000369406|HMGCS2;REV__nc|ENSG00000134240|P54868-2|HMGCS2	31.529811441608018	0.6590691889962369	6				NaN	NaN	0	NaN	2004	2493	4496
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4500	16.334	NaN	4325.9	30	0	1942.3	0.106	+			29189	NVKVKVLKQ	9	51	352.5692887646361	1054.6860368941084	3	352.56915283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NVKVKVLKQ_	ENSG00000253598|ENST00000518568|SLC10A5;SLC10A5|p.A299Qfs*4|1|0.24|ENSG00000253598|chr8:81694079-81694079|T/-|frameshift_variant;SLC10A5|p.M211Ifs*49|1|0.1|ENSG00000253598|chr8:81694340-81694341|-/A|frameshift_variant	37.15910966729921	0.4535818937225704	6				NaN	NaN	0	NaN	2005	2493	4496
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4501	16.336	NaN	1387.9	30	0	242.66	0.106				-1	LGIFTLSTS	9	48	490.7662246154157	NaN	0	490.7659606933594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LGIFTLSTS_	ENST00000548939.1_1_12:70735913-70735949:+|nuORF	30.503639358989545	0.3235605894931338	6				NaN	NaN	0	NaN	2006	2493	4496
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4502	16.338	NaN	7538.2	30	0	2699.5	0.038				-1	MVEFLQGYIG	10	46	391.5280594221218	1171.5623488665656	3	391.86248779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_M(Oxidation (M))VEFLQGYIG_	PC|p.V944M|1|0.72|ENSG00000173599|chr11:66850005-66850005|C/T|missense_variant	28.081489160057373	0.6505064946289502	6				NaN	NaN	0	NaN	2007	2493	4496
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4503	16.338	NaN	1161.9	30	0	248.12	0.142	+			31316	QIMKILKEL	9	34	372.5679016113281	NaN	0	372.5679016113281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QIMKILKEL_	ENST00000434009.5_1_6:111696256-111696382:-|nuORF;REV3L|p.T1059Lfs*43|1|0.19|ENSG00000009413|chr6:111375180-111375180|T/-|frameshift_variant	19.996771675451527	0.3693019437812985	6				NaN	NaN	0	NaN	2008	2493	4496
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4522	16.377	NaN	18267	30	0	9065.9	0.214	+			45925	VAQRDYEKA	9	39	360.52078179674965	1078.540515990449	3	360.5207214355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VAQRDYEKA_	ENSG00000123607|ENST00000243344|TTC21B	30.503639358989545	0.5181749237905803	6				NaN	NaN	0	NaN	2024	2496	4521
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4523	16.381	NaN	22697	30	0	4844.2	0.106	+			23125	KVVVSPTK	8	72	429.276367627505	856.53818232181	2	429.276123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVVVSPTK_	ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232323706-232327997:-|nuORF	136.26810882979174	0.24432575764330772	6				NaN	NaN	0	NaN	2025	2496	4521
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4524	16.383	NaN	6256.8	30	0	1900	0.106	+			4018	ATCSRVLNK	9	44	350.19036598535126	1047.5492685562538	3	350.1903381347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_ATC(Carbamidomethyl (C))SRVLNK_	ENSG00000176853|ENST00000334705|FAM91A1	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	2026	2496	4521
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4525	16.385	NaN	9253.2	30	0	1534.7	0.106	+			12065	GAAGPVCSK	9	62	395.19981035510983	788.3850677770197	2	395.1996154785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GAAGPVCSK_	ENST00000395863.7_1_20:55841273-55841597:-|nuORF	71.87747018426188	0.13267044672804276	6				NaN	NaN	0	NaN	2027	2496	4521
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4526	16.386	NaN	1943.8	30	0	282.34	0.106	+			50813	YERSLGGQ	8	51	455.2244608440264	NaN	0	455.22442626953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YERSLGGQ_	ENSG00000144711|ENST00000613206|IQSEC1;nc|ENSG00000144711|Q6DN90-2|IQSEC1;nc|ENSG00000144711|Q6DN90|IQSEC1	68.78682469695295	1.7418937515398478	6				NaN	NaN	0	NaN	2028	2496	4521
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4527	16.388	NaN	12632	30	0	2716.3	0.035	+			358	AAQKNMALK	9	59	325.519759971805	973.5374505156151	3	325.5197448730469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AAQKNMALK_	ENSG00000100345|ENST00000216181|MYH9;SYNDIG1-MYH9|1|fusion	79.45101966838831	0.09992237243120712	6				NaN	NaN	0	NaN	2029	2496	4521
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4528	16.389	NaN	18536	30	0	7040.9	0.14	+			14141	GSMKENISK	9	82	497.2552143770677	992.4958758209355	2	497.2548522949219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GSMKENISK_	ENSG00000038358|ENST00000358933|EDC4;nc|ENSG00000038358|Q6P2E9-2|EDC4	136.98908636845044	0.011892605960677736	6				NaN	NaN	0	NaN	2030	2496	4521
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4546	16.428	NaN	140260	30	0	36593	0.172	+			5260	ATVDKTVCK	9	96	482.7600263936263	963.5054998540526	2	482.75982666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATVDKTVCK_	ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1670Tfs*23|1|0.29|ENSG00000174231|chr17:1659487-1659487|C/-|frameshift_variant	152.06079943815163	0.00638878961959199	6				NaN	NaN	0	NaN	2045	2499	4545
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4547	16.431	NaN	6800.4	30	0	762.13	0.106	+			359	AAQKNMALK	9	67	487.77599792791347	973.537442922627	2	487.77581787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAQKNMALK_	ENSG00000100345|ENST00000216181|MYH9;SYNDIG1-MYH9|1|fusion	82.24051045832904	0.08786059719216216	6				NaN	NaN	0	NaN	2046	2499	4545
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4548	16.433	NaN	1873.6	30	0	205.66	0.106	+			34329	RTNSPGFQK	9	65	517.7724484901964	NaN	0	517.7723999023438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RTNSPGFQK_	ENSG00000139746|ENST00000438737|RBM26;nc|ENSG00000139746|Q5T8P6-2|RBM26;nc|ENSG00000139746|Q5T8P6-3|RBM26;nc|ENSG00000139746|Q5T8P6-4|RBM26;nc|ENSG00000139746|Q5T8P6-5|RBM26;RBM26|p.N783Ifs*5|1|0.11|ENSG00000139746|chr13:79342743-79342743|T/-|frameshift_variant	72.87924865735499	0.09578366712754152	6				NaN	NaN	0	NaN	2047	2499	4545
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4549	16.435	NaN	15632	30	0	4838.8	0.106	+			5261	ATVDKTVCK	9	53	322.17581848160546	963.5056260450165	3	322.17578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATVDKTVCK_	ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1670Tfs*23|1|0.29|ENSG00000174231|chr17:1659487-1659487|C/-|frameshift_variant	31.529811441608018	0.5085848003137583	6				NaN	NaN	0	NaN	2048	2499	4545
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4550	16.437	NaN	4461.1	30	0	555.4	0.106			+	37419	SLGPDPRV	8	53	420.7323304928371	NaN	0	420.73223876953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SLGPDPRV_	REV__ENST00000573062.5_1_17:2265030-2266200:+|nuORF	45.9519527083369	1.7418937515398478	6				NaN	NaN	0	NaN	2049	2499	4545
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4551	16.439	NaN	3118.5	30	0	937.31	0.106			+	9194	EGQRLVAAL	9	57	478.7792722519396	955.5439915706792	2	479.2771301269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EGQRLVAAL_	REV__URB2|p.L1329V|1|0.31|ENSG00000135763|chr1:229647588-229647588|C/G|missense_variant	56.72105179125745	0.24094814563026265	6				NaN	NaN	0	NaN	2050	2499	4545
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4552	16.44	NaN	1593.5	30	0	149.61	0.034			+	33673	RNLSEDLV	8	55	473.25368472285396	944.4928165125079	2	474.242431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RNLSEDLV_	REV__ENSG00000138696|ENST00000515059|BMPR1B;REV__nc|ENSG00000138696|O00238-2|BMPR1B	26.79610172149135	0.7524337208463756	6				NaN	NaN	0	NaN	2051	2499	4545
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4569	16.476	NaN	32818	30	0	2041.9	0.215	+			39274	STAQRVTYK	9	83	527.2879195708604	1052.5612862085206	2	527.2882690429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STAQRVTYK_	ENSG00000126226|ENST00000337344|PCID2;nc|ENSG00000126226|Q5JVF3-2|PCID2;nc|ENSG00000126226|Q5JVF3-3|PCID2;nc|ENSG00000126226|Q5JVF3-4|PCID2	159.27591364854348	0.004707062175358555	6				NaN	NaN	0	NaN	2065	2502	4568
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4570	16.479	NaN	11015	30	0	1750.8	0.106	+			44777	TTQKEHLLK	9	73	549.3191989771909	1096.6238450211818	2	549.3193969726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTQKEHLLK_	ENSG00000071127|ENST00000499869|WDR1	150.36159442982594	0.006784847064083231	6				NaN	NaN	0	NaN	2066	2502	4568
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4571	16.481	NaN	18582	30	0	3768	0.106	+			44778	TTQKEHLLK	9	74	366.54865892093676	1096.6241473630103	3	366.5484619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TTQKEHLLK_	ENSG00000071127|ENST00000499869|WDR1	110.11987700582712	0.028875675806141952	6				NaN	NaN	0	NaN	2067	2502	4568
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4572	16.483	NaN	11241	30	0	2717.2	0.106	+			34034	RSLDTHVTK	9	63	352.8645370413818	1055.5717817243456	3	352.86468505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RSLDTHVTK_	ENSG00000100304|ENST00000216129|TTLL12	47.227680397652996	0.3354815899219835	6				NaN	NaN	0	NaN	2068	2502	4568
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4573	16.485	NaN	987.51	30	0	100.83	0.106			+	-1	GRALLATCI	9	51	487.77599792791347	973.537442922627	2	488.7642822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_GRALLATC(Carbamidomethyl (C))I_	REV__ENSG00000278053|ENST00000617633|DDX52	23.04248740728303	0.5879033540491928	6				NaN	NaN	0	NaN	2069	2502	4568
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4574	16.487	NaN	757.96	30	0	102.59	0.035	+			46963	VKHFHANQ	8	43	490.75750970190046	NaN	0	490.7574768066406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VKHFHANQ_	ENSG00000132330|ENST00000254663|SCLY;ENST00000482031.5_1_2:238973007-238991399:+|nuORF;nc|ENSG00000132330|Q96I15-2|SCLY	25.450171626174864	1.7418937515398478	6				NaN	NaN	0	NaN	2070	2502	4568
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4575	16.487	NaN	14151	30	0	5218	0.146				-1	VSYEIKDMCIK	11	64	467.8968106086889	1400.6686024262667	3	467.8964538574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C),Oxidation (M)	_VSYEIKDM(Oxidation (M))C(Carbamidomethyl (C))IK_	ENSG00000206530|ENST00000393845|CFAP44;nc|ENSG00000206530|Q96MT7-1|CFAP44	22.561587123415745	0.7531385481947795	6				NaN	NaN	0	NaN	2071	2502	4568
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4592	16.525	NaN	11936	30	0	3082.3	0.214			+	21856	KRKMEFDK	8	89	541.2949458962455	1080.575338859291	2	541.29541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KRKMEFDK_	REV__ENSG00000214842|ENST00000399080|RAD51AP2	60.97194046774394	0.49215940876911696	6				NaN	NaN	0	NaN	2085	2505	4591
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4593	16.529	NaN	10951	30	0	2717.6	0.106				-1	 	0	64	495.2263815403032	988.4382101474064	2	495.2260437011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2086	2505	4591
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4594	16.531	NaN	6557.1	30	0	2561.2	0.106	+			16783	HPAENGKSNF	10	67	550.7597773826849	1099.5050018321697	2	550.76025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HPAENGKSNF_	B2M|p.V69Sfs*21|1|0.67|ENSG00000166710|chr15:44715554-44715555|-/A|frameshift_variant;B2M|p.V69Wfs*34|1|0.32|ENSG00000166710|chr15:44715555-44715555|A/-|frameshift_variant;B2M|p.Y98Lfs*5|1|0.08|ENSG00000166710|chr15:44715648-44715648|A/-|frameshift_variant;ENSG00000166710|ENST00000648006|B2M;ENST00000559720.5_1_15:45003705-45007919:+|nuORF	69.6276240434122	0.2803623802747859	6				NaN	NaN	0	NaN	2087	2505	4591
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4595	16.533	NaN	30120	30	0	9614.6	0.106	+			14048	GSIAIQGAIEK	11	67	362.8765813298903	1085.607914589871	3	362.8765563964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GSIAIQGAIEK_	ENSG00000075239|ENST00000265838|ACAT1;ENST00000524833.5_1_11:107992333-108005114:+|nuORF;nc|ENSG00000075239|P24752-2|ACAT1	31.529811441608018	0.6590691889962369	6				NaN	NaN	0	NaN	2088	2505	4591
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4596	16.535	NaN	4140.7	30	0	1722.3	0.106	+			32674	RAEEEIQK	8	53	501.76480780253075	1001.5150626718615	2	501.7640686035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RAEEEIQK_	ENSG00000133574|ENST00000255945|GIMAP4	87.75429964447693	0.2842685068779738	6				NaN	NaN	0	NaN	2089	2505	4591
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4597	16.536	NaN	5305.8	30	0	1097.7	0.033			+	45749	VAEEGLAAQ	9	54	444.22705808488547	886.439563236571	2	444.2266540527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VAEEGLAAQ_	REV__ENSG00000168757|ENST00000320701|TSPY2;REV__ENSG00000228927|ENST00000457222|TSPY3;REV__ENSG00000229549|ENST00000287721|TSPY8;REV__ENSG00000233803|ENST00000426950|TSPY4;REV__ENSG00000236424|ENST00000428845|TSPY10;REV__ENSG00000238074|ENST00000440215|TSPY9;REV__ENSG00000258992|ENST00000451548|TSPY1;REV__nc|ENSG00000258992|Q01534-2|TSPY1	60.97194046774394	0.20551255781574032	6				NaN	NaN	0	NaN	2090	2505	4591
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4598	16.537	NaN	845.72	30	0	277.06	0.142			+	-1	VLYLPSKMS	9	30	351.86077880859375	NaN	0	351.86077880859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_VLYLPSKM(Oxidation (M))S_	REV__AHCTF1|p.E1870Kfs*19|1|0.27|ENSG00000153207|chr1:246850426-246850426|T/-|frameshift_variant;REV__ENSG00000153207|ENST00000648844|AHCTF1;REV__ENST00000420969.1_1_2:162360026-162361742:-|nuORF;REV__ENST00000470300.5_1_1:247004234-247028597:-|nuORF;REV__ENST00000483900.1_1_1:247015289-247040365:-|nuORF;REV__nc|ENSG00000153207|Q8WYP5-2|AHCTF1;REV__nc|ENSG00000153207|Q8WYP5-3|AHCTF1	19.996771675451527	0.3693019437812985	6				NaN	NaN	0	NaN	2091	2505	4591
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4616	16.576	NaN	17198	30	0	2234.3	0.215	+			41880	SVTKTALNK	9	75	481.2875494207295	960.560545908259	2	481.287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVTKTALNK_	ENSG00000187164|ENST00000355371|SHTN1;nc|ENSG00000187164|A0MZ66-3|SHTN1;nc|ENSG00000187164|A0MZ66-4|SHTN1;nc|ENSG00000187164|A0MZ66-5|SHTN1;nc|ENSG00000187164|A0MZ66-6|SHTN1;nc|ENSG00000187164|A0MZ66-7|SHTN1;nc|ENSG00000187164|A0MZ66-8|SHTN1	114.8945686534367	0.024290463251177924	6				NaN	NaN	0	NaN	2106	2508	4615
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4617	16.579	NaN	22352	30	0	8193.8	0.106	+			40723	SVCGKSFHR	9	62	359.84650078490887	1076.5176729549266	3	359.8466491699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SVC(Carbamidomethyl (C))GKSFHR_	ENSG00000066422|ENST00000312938|ZBTB11;ZBTB11|p.E974Nfs*14|1|0.1|ENSG00000066422|chr3:101651408-101651408|C/-|frameshift_variant	47.95952297671804	0.32689736945648856	6				NaN	NaN	0	NaN	2107	2508	4615
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4618	16.582	NaN	4151.3	30	0	1138.1	0.106	+			9921	EQTAENKPLG	10	69	543.7747029011542	1085.5348528691084	2	543.7752685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EQTAENKPLG_	ENSG00000275066|ENST00000612223|SYNRG;nc|ENSG00000275066|Q9UMZ2-3|SYNRG;nc|ENSG00000275066|Q9UMZ2-4|SYNRG;nc|ENSG00000275066|Q9UMZ2-5|SYNRG;nc|ENSG00000275066|Q9UMZ2-6|SYNRG;nc|ENSG00000275066|Q9UMZ2-7|SYNRG;nc|ENSG00000275066|Q9UMZ2-8|SYNRG;nc|ENSG00000275066|Q9UMZ2-9|SYNRG;SYNRG|p.N610Tfs*3|2|0.33|ENSG00000275066|chr17:37553894-37553894|T/-|frameshift_variant	59.93077597824379	0.36646980200755325	6				NaN	NaN	0	NaN	2108	2508	4615
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4619	16.583	NaN	5630.5	30	0	1055.3	0.106	+			38862	SSNSSPIGK	9	62	438.72481593490585	875.4350789366117	2	438.7243347167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSNSSPIGK_	ENSG00000080345|ENST00000444746|RIF1;nc|ENSG00000080345|Q5UIP0-2|RIF1	120.8684288430529	0.02067403653475984	6				NaN	NaN	0	NaN	2109	2508	4615
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4620	16.585	NaN	3061.3	30	0	448.29	0.106				-1	SKSNGLSK	8	57	431.7349759688075	861.455399004415	2	431.7347717285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SKSNGLSK_	AGAP5|p.D368G|1|0.09|ENSG00000172650|chr10:73675557-73675557|T/C|missense_variant;AGAP9|p.S439Lfs*10|1|0.07|ENSG00000204172|chr10:47502950-47502950|G/-|frameshift_variant;ENSG00000172650|ENST00000374094|AGAP5;ENSG00000188234|ENST00000616763|AGAP4;ENSG00000204149|ENST00000412531|AGAP6;ENSG00000204172|ENST00000452145|AGAP9;nc|ENSG00000188234|Q96P64|AGAP4;nc|ENSG00000204149|Q5VW22|AGAP6;nc|ENSG00000204172|Q5VTM2|AGAP9;nc|ENSG00000261011|Q8TF27|AGAP11	54.776311868738084	0.5534952410049249	6				NaN	NaN	0	NaN	2110	2508	4615
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4621	16.587	NaN	5126.8	30	0	547.86	0.034	+			19790	KEAPAPPKA	9	59	454.7636234292983	907.5126939253967	2	454.76336669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KEAPAPPKA_	ENSG00000198242|ENST00000422514|RPL23A;ENST00000399247.6_1_6:29694709-29694913:-|nuORF;ENST00000582736.1_1_17:27047023-27047984:+|nuORF;ENST00000606975.1_1_8:163470-182153:-|nuORF	104.01359247289065	0.03510646158778409	6				NaN	NaN	0	NaN	2111	2508	4615
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4622	16.588	NaN	2143.2	30	0	493.52	0.139			+	11829	FSVSGKMGL	9	49	463.2458825596072	NaN	0	463.2457580566406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FSVSGKMGL_	REV__ENST00000481138.5_1_9:99614242-99615248:-|nuORF	49.44154591367651	0.21054156626303966	6				NaN	NaN	0	NaN	2112	2508	4615
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4640	16.627	NaN	30411	30	0	16105	0.214	+			23013	KVSKELVEK	9	84	353.88502976627626	1058.6332598990289	3	353.88507080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVSKELVEK_	ENSG00000125844|ENST00000377813|RRBP1;nc|ENSG00000125844|Q9P2E9-3|RRBP1;RRBP1|p.A628Gfs*69|1|0.35|ENSG00000125844|chr20:17621915-17621916|-/T|frameshift_variant	79.48907831485694	0.09975780661107167	6				NaN	NaN	0	NaN	2127	2511	4639
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4641	16.631	NaN	270470	30	0	71698	0.106	+			38879	SSNSYAIKK	9	127	333.1818349882925	996.5236755650776	3	333.18194580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSNSYAIKK_	ENSG00000083845|ENST00000196551|RPS5;ENST00000599232.1_1_19:58906030-58906114:+|nuORF	99.01295224348159	0.040209060045561164	6				NaN	NaN	0	NaN	2128	2511	4639
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4642	16.633	NaN	14539	30	0	1467.9	0.106	+			20692	KGPGSTKEL	9	84	458.758573259875	915.50259358655	2	458.7582702636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KGPGSTKEL_	ENSG00000113141|ENST00000417647|IK;ENST00000515015.1_1_5:140038902-140040409:+|nuORF	78.26377905018397	0.10505600812668463	6				NaN	NaN	0	NaN	2129	2511	4639
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4643	16.635	NaN	11392	30	0	1668.9	0.106	+			41859	SVTEPSQGR	9	69	480.74087057565805	959.4671882181161	2	480.7406311035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVTEPSQGR_	ENSG00000019102|ENST00000326621|VSIG2;nc|ENSG00000019102|Q96IQ7-2|VSIG2	87.69643885390035	0.07135982304947239	6				NaN	NaN	0	NaN	2130	2511	4639
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4644	16.637	NaN	1471.8	30	0	399.06	0.106			+	-1	CARSVGCA	8	42	440.6929107755835	879.3712686179671	2	440.6926574707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))ARSVGC(Carbamidomethyl (C))A_	REV__ENST00000587482.1_1_19:3649915-3700388:-|nuORF	18.324413293986947	0.7971860551947066	6				NaN	NaN	0	NaN	2131	2511	4639
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4645	16.639	NaN	2132	30	0	315.31	0.032	+			48328	VTGAANVAK	9	56	415.74028305089143	829.4660131685829	2	415.7401123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTGAANVAK_	ENSG00000167676|ENST00000301286|PLIN4;ENSG00000167676|ENST00000301286|PLIN4;ENSG00000167676|ENST00000301286|PLIN4;ENSG00000167676|ENST00000301286|PLIN4;PLIN4|p.A561Qfs*13|1|0.1|ENSG00000167676|chr19:4512237-4512237|C/-|frameshift_variant;PLIN4|p.G1001Afs*9|1|0.16|ENSG00000167676|chr19:4510916-4510916|C/-|frameshift_variant;PLIN4|p.G1001Afs*9|1|0.16|ENSG00000167676|chr19:4510916-4510916|C/-|frameshift_variant;PLIN4|p.G1001Afs*9|1|0.16|ENSG00000167676|chr19:4510916-4510916|C/-|frameshift_variant;PLIN4|p.G1001Afs*9|1|0.16|ENSG00000167676|chr19:4510916-4510916|C/-|frameshift_variant	27.882242232435846	0.5426732730940306	6				NaN	NaN	0	NaN	2132	2511	4639
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4646	16.639	NaN	3737.3	30	0	511.2	0.14				-1	MPQGGGQHY	9	61	495.7085717442257	989.4025905552514	2	495.7086486816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_M(Oxidation (M))PQGGGQHY_	ENSG00000141380|ENST00000415083|SS18;nc|ENSG00000141380|Q15532-2|SS18	55.50420428727701	0.2510918378945873	6				NaN	NaN	0	NaN	2133	2511	4639
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4664	16.675	NaN	7672.4	30	0	1889.9	0.214			+	15543	GVEYKQQK	8	60	327.17832812491235	978.5131549749372	3	327.1783752441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVEYKQQK_	REV__ENST00000460780.5_1_1:201330340-201331096:-|nuORF	35.61828744233558	0.6843154725607303	6				NaN	NaN	0	NaN	2148	2514	4663
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4665	16.678	NaN	25442	30	0	3541.8	0.106	+			44233	TRSEAAMT	8	81	433.70527740508555	865.3960018769711	2	433.7052307128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TRSEAAMT_	ENSG00000156113|ENST00000286628|KCNMA1;nc|ENSG00000156113|Q12791-2|KCNMA1;nc|ENSG00000156113|Q12791-3|KCNMA1;nc|ENSG00000156113|Q12791-4|KCNMA1;nc|ENSG00000156113|Q12791-5|KCNMA1;nc|ENSG00000156113|Q12791-7|KCNMA1	38.80614096846853	0.6637206697844082	6				NaN	NaN	0	NaN	2149	2514	4663
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4666	16.68	NaN	3432.9	30	0	382.98	0.106	+			37873	SNSYAIKK	8	60	455.7529853094293	NaN	0	455.7529602050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SNSYAIKK_	ENSG00000083845|ENST00000196551|RPS5;ENST00000599232.1_1_19:58906030-58906114:+|nuORF	68.78682469695295	1.7418937515398478	6				NaN	NaN	0	NaN	2150	2514	4663
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4667	16.682	NaN	1380	30	0	307.98	0.106	+			38880	SSNSYAIKK	9	61	499.2697048505071	996.5248567678142	2	499.26922607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSNSYAIKK_	ENSG00000083845|ENST00000196551|RPS5;ENST00000599232.1_1_19:58906030-58906114:+|nuORF	65.15724298150197	0.17062369902793603	6				NaN	NaN	0	NaN	2151	2514	4663
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4668	16.684	NaN	1003.3	30	0	91.471	0.106			+	-1	NMLGKELTF	9	44	534.7752249759866	NaN	0	534.7752685546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_NM(Oxidation (M))LGKELTF_	REV__ENST00000435989.6_1_19:58384023-58384878:-|nuORF	31.529811441608018	0.3183796599642538	6				NaN	NaN	0	NaN	2152	2514	4663
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4669	16.686	NaN	3526.7	30	0	409.57	0.106	+			39147	SSVPGADIK	9	55	437.2369354895222	872.4593180458444	2	437.237060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSVPGADIK_	ENSG00000144711|ENST00000613206|IQSEC1;nc|ENSG00000144711|Q6DN90-2|IQSEC1;nc|ENSG00000144711|Q6DN90|IQSEC1	71.87747018426188	0.13267044672804276	6				NaN	NaN	0	NaN	2153	2514	4663
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4670	16.688	NaN	3784.2	30	0	747.57	0.034			+	38917	SSPQTETSK	9	74	482.73288628778596	963.4512196423719	2	482.73260498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSPQTETSK_	REV__ENSG00000164323|ENST00000458385|CFAP97;REV__nc|ENSG00000164323|Q9P2B7-2|CFAP97	65.46538089061403	0.16805504838372562	6				NaN	NaN	0	NaN	2154	2514	4663
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4689	16.723	NaN	13403	30	0	1484.1	0.214	+			51291	YSAARSAAA	9	78	434.2197315789475	866.424910224695	2	434.2195129394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YSAARSAAA_	ENSG00000189143|ENST00000340958|CLDN4	80.45461616416974	0.09558281504443908	6				NaN	NaN	0	NaN	2170	2517	4688
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4690	16.727	NaN	39544	30	0	8339.5	0.106	+			4786	ATNKFITKDK	10	99	389.2242230364564	1164.6508397095693	3	389.2240295410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATNKFITKDK_	ENSG00000106031|ENST00000649031|HOXA13	115.23196543181992	0.034063879665207575	6				NaN	NaN	0	NaN	2171	2517	4688
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4691	16.729	NaN	4359.9	30	0	1622.5	0.106			+	37675	SLRSVKGLTF	10	40	369.88885498046875	NaN	0	369.88885498046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLRSVKGLTF_	REV__ENST00000361972.8_1_10:7423786-7423873:-|nuORF	31.634271133179894	0.39630454568332174	6				NaN	NaN	0	NaN	2172	2517	4688
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4692	16.731	NaN	3761.5	30	0	1547.1	0.106	+			16948	HPNQEAHSL	9	60	516.7466665953223	NaN	0	516.7466430664062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HPNQEAHSL_	ENSG00000073060|ENST00000261693|SCARB1;ENST00000535005.5_1_12:125267231-125351555:-|nuORF;nc|ENSG00000073060|Q8WTV0-3|SCARB1;nc|ENSG00000073060|Q8WTV0-4|SCARB1;nc|ENSG00000073060|Q8WTV0-5|SCARB1;nc|ENSG00000073060|Q8WTV0|SCARB1	76.7741389293348	0.08243745921263976	6				NaN	NaN	0	NaN	2173	2517	4688
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4693	16.733	NaN	6831.9	30	0	978.49	0.106	+			14813	GTLGAVHK	8	55	391.72993344810936	781.4453139630187	2	391.7295837402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTLGAVHK_	ENSG00000099785|ENST00000215555|MARCHF2;nc|ENSG00000099785|Q9P0N8-2|MARCHF2	97.47269410471826	0.25484828363392314	6				NaN	NaN	0	NaN	2174	2517	4688
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4694	16.735	NaN	1183.6	30	0	98.825	0.106	+			33486	RKDHKIGY	8	57	508.7872619628906	NaN	0	508.7872619628906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RKDHKIGY_	SLC51A|p.V324I|1|0.29|ENSG00000163959|chr3:196233146-196233146|G/A|missense_variant	20.481830146152948	1.741893751539848	6				NaN	NaN	0	NaN	2175	2517	4688
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4695	16.736	NaN	6131.5	30	0	2026.4	0.033	+			44660	TTGEPATPK	9	63	451.23491878376063	900.4552846343213	2	451.2347412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TTGEPATPK_	ENSG00000005302|ENST00000312196|MSL3;MSL3|p.P440Qfs*22|1|0.32|ENSG00000005302|chrX:11772188-11772188|C/-|frameshift_variant;nc|ENSG00000005302|Q8N5Y2-2|MSL3;nc|ENSG00000005302|Q8N5Y2-3|MSL3;nc|ENSG00000005302|Q8N5Y2-4|MSL3;nc|ENSG00000005302|Q8N5Y2-5|MSL3;nc|ENSG00000005302|Q8N5Y2-6|MSL3	77.31757898189308	0.1091473830098891	6				NaN	NaN	0	NaN	2176	2517	4688
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4714	16.773	NaN	130090	30	0	16103	0.191	+			50258	WPVQKERIGA	10	123	395.2231205141371	1182.6475321426115	3	395.2228088378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WPVQKERIGA_	ENSG00000164342|ENST00000296795|TLR3;nc|ENSG00000164342|O15455-2|TLR3	76.16968421966216	0.22691431239609447	6				NaN	NaN	0	NaN	2192	2520	4713
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4715	16.776	NaN	28168	30	0	10703	0.106	+			45960	VASQVSLRK	9	78	329.8696525198319	NaN	0	329.8696594238281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VASQVSLRK_	ENST00000366767.7_1_1:227178271-227178454:-|nuORF	63.30626980617807	0.13521764763214936	6				NaN	NaN	0	NaN	2193	2520	4713
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4716	16.779	NaN	22095	30	0	8145.1	0.106	+			22576	KTSSAFVGK	9	71	462.7610309373624	923.5075089415249	2	462.7608947753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KTSSAFVGK_	ENSG00000173692|ENST00000308696|PSMD1;nc|ENSG00000173692|Q99460-2|PSMD1;PSMD1-NHEJ1|1|fusion;PSMD1|p.K849Rfs*44|1|0.38|ENSG00000173692|chr2:231165258-231165258|A/-|frameshift_variant;PSMD1|p.L603Afs*7|1|0.19|ENSG00000173692|chr2:231085100-231085101|-/T|frameshift_variant;PSMD1|p.N355Tfs*17|1|0.23|ENSG00000173692|chr2:231077150-231077150|A/-|frameshift_variant	129.42129120953632	0.01549634589885217	6				NaN	NaN	0	NaN	2194	2520	4713
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4717	16.78	NaN	2036.1	30	0	306.82	0.106	+			33014	REHEKEVL	8	54	520.2799642655456	NaN	0	520.2804565429688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_REHEKEVL_	ENSG00000117632|ENST00000455785|STMN1;ENST00000465604.1_1_1:26227509-26228203:-|nuORF;ENST00000485226.1_1_1:26227942-26230296:-|nuORF;nc|ENSG00000117632|P16949-2|STMN1	39.252832667884924	1.7418937515398478	6				NaN	NaN	0	NaN	2195	2520	4713
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4718	16.782	NaN	3286.2	30	0	624.39	0.106	+			33568	RLGSVEAPK	9	59	478.7792722519396	955.5439915706792	2	478.7793884277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RLGSVEAPK_	ENSG00000111641|ENST00000322166|NOP2;nc|ENSG00000111641|P46087-2|NOP2;nc|ENSG00000111641|P46087-3|NOP2;nc|ENSG00000111641|P46087-4|NOP2	85.16082228582465	0.07850854922700509	6				NaN	NaN	0	NaN	2196	2520	4713
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4719	16.784	NaN	5129.7	30	0	1121.4	0.035			+	8403	EAPDQLIPAG	10	61	505.7615387017247	1009.5085244702494	2	505.7612609863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EAPDQLIPAG_	REV__ENST00000397527.5_2_20:34043234-34046179:+|nuORF	56.72105179125745	0.3956618550748046	6				NaN	NaN	0	NaN	2197	2520	4713
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4720	16.785	NaN	1755.8	30	0	364.42	0.145			+	-1	ADHKIRCRAL	10	45	413.89459228515625	NaN	0	413.89459228515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_ADHKIRC(Carbamidomethyl (C))RAL_	REV__ENSG00000179299|ENST00000381782|NSUN7;REV__ENST00000469033.1_1_4:40776294-40778281:+|nuORF;REV__ENST00000473399.5_1_4:40752710-40776973:+|nuORF;REV__nc|ENSG00000179299|Q8NE18-2|NSUN7;REV__nc|ENSG00000179299|Q8NE18-3|NSUN7;REV__NSUN7|p.D705*|1|0.2|ENSG00000179299|chr4:40808893-40808894|-/C|frameshift_variant	22.579656572578934	0.4201028297492154	6				NaN	NaN	0	NaN	2198	2520	4713
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4738	16.821	NaN	49284	30	0	25449	0.214	+			14603	GTGASGSFK	9	66	406.2010377425757	810.3875225519514	2	406.20074462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTGASGSFK_	ENSG00000124575|ENST00000244534|H1-3;ENSG00000124610|ENST00000244573|H1-1;ENSG00000168298|ENST00000304218|H1-4;ENSG00000184357|ENST00000331442|H1-5;ENSG00000187475|ENST00000338379|H1-6;ENSG00000187837|ENST00000343677|H1-2	139.97047562133406	0.010493916756945389	6				NaN	NaN	0	NaN	2213	2523	4737
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4739	16.825	NaN	6686.6	30	0	1381.1	0.106	+			32898	RDREDREAL	9	59	387.1987775450558	1158.5745032353675	3	387.1985168457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RDREDREAL_	ENSG00000140259|ENST00000267812|MFAP1	41.42661286455405	0.403525789677298	6				NaN	NaN	0	NaN	2214	2523	4737
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4740	16.827	NaN	5105.6	30	0	1717.1	0.106				-1	KGRIHTMAQ	9	52	353.1905078431203	1056.549694129561	3	353.1904602050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_KGRIHTM(Oxidation (M))AQ_	BRD8|p.R1163H|1|0.22|ENSG00000112983|chr5:138140832-138140832|C/T|missense_variant	30.317721548370564	0.5199124245378496	6				NaN	NaN	0	NaN	2215	2523	4737
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4741	16.829	NaN	7318.9	30	0	956.98	0.106	+			3612	ASVSSSVAK	9	65	418.229457125309	NaN	0	418.2296142578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASVSSSVAK_	ENSG00000168564|ENST00000504169|CDKN2AIP	77.31757898189308	0.08057531075035683	6				NaN	NaN	0	NaN	2216	2523	4737
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4742	16.83	NaN	1851.1	30	0	323.67	0.106			+	33146	RESHRGLF	8	57	501.2686071820086	NaN	0	501.2684020996094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RESHRGLF_	REV__ENSG00000105186|ENST00000306065|ANKRD27	30.503639358989545	1.7418937515398478	6				NaN	NaN	0	NaN	2217	2523	4737
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4743	16.832	NaN	758.53	30	0	176.67	0.037				-1	KFLMRANTV	9	31	365.8717956542969	NaN	0	365.8717956542969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_KFLM(Oxidation (M))RANTV_	ENSG00000143199|ENST00000367851|ADCY10;nc|ENSG00000143199|Q96PN6-2|ADCY10;nc|ENSG00000143199|Q96PN6-4|ADCY10	23.52269567125451	0.3573684076213556	6				NaN	NaN	0	NaN	2218	2523	4737
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4744	16.833	NaN	3718.5	30	0	552.21	0.143			+	27201	MEFQQHLKK	9	54	396.87887218083534	1187.614787142706	3	397.21929931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MEFQQHLKK_	REV__nc|ENSG00000176406|Q9UQ26-8|RIMS2	31.529811441608018	0.5085848003137583	6				NaN	NaN	0	NaN	2219	2523	4737
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4760	16.868	NaN	7553.2	30	0	2613.4	0.214	+			20591	KGAAIHISK	9	59	462.78496963047303	923.5553863277461	2	462.78485107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KGAAIHISK_	ENSG00000154305|ENST00000344922|MIA3;ENST00000470521.1_1_1:222791452-222819114:+|nuORF;MIA3|p.D527V|1|0.27|ENSG00000154305|chr1:222628800-222628800|A/T|missense_variant;MIA3|p.E729Nfs*3|1|0.09|ENSG00000154305|chr1:222629403-222629403|A/-|frameshift_variant;MIA3|p.M993Nfs*3|1|0.25|ENSG00000154305|chr1:222630191-222630192|-/A|frameshift_variant;MIA3|p.N746Kfs*10|1|0.35|ENSG00000154305|chr1:222629450-222629451|-/A|frameshift_variant;MIA3|p.P1645Yfs*19|1|0.06|ENSG00000154305|chr1:222659963-222659964|-/TATAG|frameshift_variant;MIA3|p.V974Sfs*4|1|0.36|ENSG00000154305|chr1:222630134-222630135|-/A|frameshift_variant;nc|ENSG00000154305|Q5JRA6-2|MIA3	140.11223852658463	0.010427410095706195	6				NaN	NaN	0	NaN	2232	2526	4759
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4761	16.871	NaN	40643	30	0	3252	0.106	+			38157	SQAPKAFNK	9	100	495.77214486233623	989.5297367914725	2	495.7718811035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SQAPKAFNK_	ENSG00000099812|ENST00000215582|MISP	79.71258880314673	0.09879134589249085	6				NaN	NaN	0	NaN	2233	2526	4759
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4762	16.873	NaN	1199.8	30	0	204.64	0.106			+	42651	TAVKASKQI	9	53	473.28997802734375	NaN	0	473.28997802734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TAVKASKQI_	REV__RSRP1|p.A265V|1|0.27|ENSG00000117616|chr1:25242668-25242668|G/A|missense_variant	39.252832667884924	0.27938773122138094	6				NaN	NaN	0	NaN	2234	2526	4759
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4763	16.875	NaN	7331.5	30	0	1315	0.106	+			44296	TSASSSKKP	9	66	446.7404113799665	891.466269826733	2	446.53228759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TSASSSKKP_	ENSG00000144218|ENST00000672756|AFF3;nc|ENSG00000144218|P51826-2|AFF3	39.252832667884924	0.4290233611298554	6				NaN	NaN	0	NaN	2235	2526	4759
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4764	16.877	NaN	973.07	30	0	84.965	0.106			+	36889	SIGSLVTTWV	10	48	531.7935791015625	NaN	0	531.7935791015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SIGSLVTTWV_	REV__ENST00000262241.6_1_14:103192864-103193323:+|nuORF	40.77816245573522	0.36390427802201647	6				NaN	NaN	0	NaN	2236	2526	4759
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4765	16.879	NaN	1728	30	0	274.9	0.106				-1	MDKLQIKDK	9	38	378.8778381347656	NaN	0	378.8778381347656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_M(Oxidation (M))DKLQIKDK_	ENSG00000159399|ENST00000290573|HK2;ENST00000447818.2_1_X:79828255-79829731:-|nuORF	32.81241826257853	0.3119040447479903	6				NaN	NaN	0	NaN	2237	2526	4759
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4766	16.881	NaN	2755.7	30	0	406.09	0.038			+	49989	WALTLLYLGL	10	45	388.2327336948008	1161.6763716846024	3	388.2315979003906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_WALTLLYLGL_	REV__ENSG00000172324|ENST00000302040|OR5A2	24.519189625965996	0.6795976720565101	6				NaN	NaN	0	NaN	2238	2526	4759
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4783	16.916	NaN	7853.9	30	0	2169.6	0.214	+			15030	GTNHQLTVK	9	66	499.2751343928635	996.535715852527	2	499.27471923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTNHQLTVK_	ENSG00000142197|ENST00000691173|DOP1B;nc|ENSG00000142197|Q9Y3R5-2|DOP1B	96.66504779109242	0.04607440320619715	6				NaN	NaN	0	NaN	2252	2529	4782
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4784	16.92	NaN	5918.8	30	0	1399.2	0.106	+			23072	KVTTSITSK	9	66	482.7873940190444	963.5602351048889	2	482.7870178222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVTTSITSK_	ENSG00000082074|ENST00000512982|FYB1;nc|ENSG00000082074|O15117-3|FYB1;nc|ENSG00000082074|O15117|FYB1	80.91624569148213	0.09358672614454815	6				NaN	NaN	0	NaN	2253	2529	4782
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4785	16.922	NaN	4903.5	30	0	895.95	0.106	+			25709	LRNGHPAQ	8	63	446.7404113799665	891.466269826733	2	446.74017333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LRNGHPAQ_	ENST00000286648.9_1_4:71859482-71859599:+|nuORF	35.200714571348534	0.6875396545722289	6				NaN	NaN	0	NaN	2254	2529	4782
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4786	16.924	NaN	2661	30	0	365.52	0.106	+			28113	NAHESKQMY	9	54	554.2480697914782	1106.4815866497563	2	554.2486572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NAHESKQMY_	ENSG00000108639|ENST00000225777|SYNGR2;ENST00000591770.1_1_17:76164697-76167257:+|nuORF;nc|ENSG00000108639|O43760-2|SYNGR2	77.31757898189308	0.1091473830098891	6				NaN	NaN	0	NaN	2255	2529	4782
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4787	16.926	NaN	3350.3	30	0	614.2	0.106	+			32491	QVPRTRHH	8	61	515.7875008924627	1029.5604488517254	2	515.7877807617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QVPRTRHH_	ENST00000473661.5_1_3:9867594-9876502:+|nuORF	58.78195531508484	0.5138399468736706	6				NaN	NaN	0	NaN	2256	2529	4782
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4788	16.927	NaN	5853.9	30	0	1423.2	0.032	+			14816	GTLGGSPTK	9	56	409.22405121803826	816.4335495028765	2	409.2242431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTLGGSPTK_	ENSG00000110274|ENST00000278935|CEP164;ENST00000533223.1_1_11:117257895-117280842:+|nuORF;ENST00000533675.5_1_11:117265793-117282881:+|nuORF;nc|ENSG00000110274|Q9UPV0-2|CEP164	104.0567914643314	0.03506238181059741	6				NaN	NaN	0	NaN	2257	2529	4782
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4789	16.928	NaN	1373.3	30	0	261.14	0.142			+	14642	GTGVKELPHAP	11	32	369.2056884765625	NaN	0	369.2056884765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GTGVKELPHAP_	REV__ENST00000331872.10_1_1:182352580-182352679:-|nuORF	26.063383197487333	0.44926255568796863	6				NaN	NaN	0	NaN	2258	2529	4782
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4807	16.967	NaN	36055	30	0	5842.8	0.214	+			22729	KVAVGVAVAA	10	77	442.7819125047451	883.5492720762902	2	442.78155517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVAVGVAVAA_	ENST00000555412.1_1_14:70234559-70234658:+|nuORF	71.29570347882199	0.26673431503403816	6				NaN	NaN	0	NaN	2273	2532	4806
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4808	16.971	NaN	2650.8	30	0	433.45	0.106			+	-1	SGEGVELM	8	50	419.18713618921174	836.3597194452235	2	419.18695068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_SGEGVELM(Oxidation (M))_	REV__ENSG00000151503|ENST00000534548|NCAPD3;REV__NCAPD3|p.A322Lfs*24|1|0.31|ENSG00000151503|chr11:134206654-134206654|G/-|frameshift_variant;REV__NCAPD3|p.S1143Ffs*5|1|0.35|ENSG00000151503|chr11:134168141-134168142|-/A|frameshift_variant	25.450171626174864	0.7628259754767981	6				NaN	NaN	0	NaN	2274	2532	4806
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4809	16.973	NaN	7920.8	30	0	3446.4	0.106				-1	STKEMHPNK	9	61	363.1782307142701	1086.5128627430104	3	363.17816162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_STKEM(Oxidation (M))HPNK_	ENSG00000188738|ENST00000424728|FSIP2;FSIP2|p.D5579Mfs*10|1|0.09|ENSG00000188738|chr2:185806029-185806029|A/-|frameshift_variant;FSIP2|p.K6152Rfs*27|1|0.43|ENSG00000188738|chr2:185807758-185807758|A/-|frameshift_variant;FSIP2|p.K6528Nfs*5|1|0.33|ENSG00000188738|chr2:185808884-185808884|A/-|frameshift_variant;FSIP2|p.V5734Yfs*24|2|0.23|ENSG00000188738|chr2:185806499-185806499|A/-|frameshift_variant;FSIP2|p.V6322*|1|0.42|ENSG00000188738|chr2:185808265-185808265|A/-|frameshift_variant;nc|ENSG00000188738|Q5CZC0-2|FSIP2	39.252832667884924	0.4290233611298554	6				NaN	NaN	0	NaN	2275	2532	4806
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4810	16.975	NaN	15960	30	0	8746.3	0.106	+			14632	GTGNMEIKK	9	41	326.50760529129815	976.5009864740945	3	326.50762939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTGNMEIKK_	ENSG00000138496|ENST00000682323|PARP9;nc|ENSG00000138496|Q8IXQ6-3|PARP9;nc|ENSG00000138496|Q8IXQ6|PARP9;PARP9|p.T633Pfs*5|2|0.22|ENSG00000138496|chr3:122537047-122537047|T/-|frameshift_variant	35.61828744233558	0.47037581924408073	6				NaN	NaN	0	NaN	2276	2532	4806
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4811	16.976	NaN	12496	30	0	3918.2	0.106	+			22368	KTIDASVSK	9	70	474.7717850879681	947.5290172427362	2	474.7713317871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KTIDASVSK_	ENSG00000171681|ENST00000261168|ATF7IP;ENST00000535179.1_1_12:14619386-14628955:+|nuORF;ENST00000537653.5_1_12:14576849-14628955:+|nuORF;nc|ENSG00000171681|Q6VMQ6-2|ATF7IP;nc|ENSG00000171681|Q6VMQ6-4|ATF7IP;nc|ENSG00000171681|Q6VMQ6-5|ATF7IP	150.81021883065287	0.006680279908938716	6				NaN	NaN	0	NaN	2277	2532	4806
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4812	16.978	NaN	5991	30	0	594.87	0.041	+			3641	ASWQFGLNYMY	11	64	465.8732868843588	1394.5980312532763	3	465.87310791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_ASWQFGLNYM(Oxidation (M))Y_	tr|U7SS28|U7SS28_FUSNUAutotransporterdomain-containingprotein(Fragment)OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01636PE=4SV=1	55.08391021199286	0.3673379875553588	6				NaN	NaN	0	NaN	2278	2532	4806
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4831	17.015	NaN	60475	30	0	23835	0.214	+			23081	KVVDLANKK	9	84	338.88167261525876	1013.6231884459763	3	338.88165283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVVDLANKK_	ENSG00000104413|ENST00000433389|ESRP1;ESRP1|p.L333Sfs*55|1|0.35|ENSG00000104413|chr8:94668009-94668009|G/-|frameshift_variant;ESRP1|p.N512Hfs*7|2|0.33|ENSG00000104413|chr8:94674383-94674384|AA/-|frameshift_variant;ESRP1|p.N512Kfs*8|1|0.48|ENSG00000104413|chr8:94674382-94674383|-/A|frameshift_variant;ESRP1|p.N512Tfs*2|2|0.36|ENSG00000104413|chr8:94674383-94674383|A/-|frameshift_variant;nc|ENSG00000104413|Q6NXG1-2|ESRP1;nc|ENSG00000104413|Q6NXG1-3|ESRP1;nc|ENSG00000104413|Q6NXG1-4|ESRP1;nc|ENSG00000104413|Q6NXG1-5|ESRP1	120.30596017624542	0.02101454110788768	6				NaN	NaN	0	NaN	2294	2535	4830
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4832	17.019	NaN	6822.3	30	0	931.96	0.106	+			5421	ATYHGSFSTKK	11	59	409.54384313156976	1225.6096999949093	3	409.54364013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATYHGSFSTKK_	ENSG00000163359|ENST00000295550|COL6A3;ENST00000491769.1_1_2:238233419-238250825:-|nuORF;ENST00000493608.1_1_2:238242084-238243404:-|nuORF;nc|ENSG00000163359|P12111-2|COL6A3;nc|ENSG00000163359|P12111-4|COL6A3	29.170058357718403	0.683821074385409	6				NaN	NaN	0	NaN	2295	2535	4830
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4833	17.021	NaN	11999	30	0	6538.3	0.106	+			22381	KTIDRLAGK	9	54	334.54155781496456	1000.6028440450937	3	334.54156494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KTIDRLAGK_	nc|ENSG00000211895|P01876-1|IGHA1	98.58198989935565	0.04066992115528678	6				NaN	NaN	0	NaN	2296	2535	4830
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4834	17.023	NaN	9801.4	30	0	2237.7	0.106	+			84	AACSKYFKK	9	67	368.1954274162373	1101.564452848912	3	368.1953430175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_AAC(Carbamidomethyl (C))SKYFKK_	ENSG00000184828|ENST00000590800|ZBTB7C;ZBTB7C|p.D132Tfs*90|4|0.39|ENSG00000184828|chr18:48040714-48040714|C/-|frameshift_variant;ZBTB7C|p.P321Lfs*18|4|0.42|ENSG00000184828|chr18:48040148-48040148|C/-|frameshift_variant	60.11826168202944	0.21262886028301267	6				NaN	NaN	0	NaN	2297	2535	4830
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4835	17.024	NaN	1268	30	0	592.21	0.106			+	27373	MKEDPTPSFMK	11	24	655.8082753110759	1309.6019976889518	2	655.8082885742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MKEDPTPSFMK_	REV__CPZ|p.I506Hfs*8|1|0.42|ENSG00000109625|chr4:8618435-8618436|-/G|frameshift_variant;REV__ENSG00000109625|ENST00000360986|CPZ;REV__nc|ENSG00000109625|Q66K79-2|CPZ;REV__nc|ENSG00000109625|Q66K79-3|CPZ	28.081489160057373	0.6952392775027776	6				NaN	NaN	0	NaN	2298	2535	4830
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4836	17.026	NaN	3815.2	30	0	1062.2	0.034			+	5207	ATTSVASLTS	10	51	469.24566460313196	936.4767762730639	2	469.2452697753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATTSVASLTS_	REV__ENSG00000178297|ENST00000696167|TMPRSS9;REV__nc|ENSG00000178297|Q7Z410|TMPRSS9	58.78195531508484	0.37691818691852547	6				NaN	NaN	0	NaN	2299	2535	4830
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4837	17.027	NaN	4140.3	30	0	735.85	0.143				-1	IDMLPHCPL	9	45	352.1735652270319	1053.4988662812957	3	352.173583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_IDM(Oxidation (M))LPHCPL_	ENSG00000186088|ENST00000257626|GSAP;ENST00000334003.11_1_7:76959552-77026708:-|nuORF;GSAP|p.D616Gfs*8|1|0.14|ENSG00000186088|chr7:77323701-77323723|CTGTAGGTGTCTCAAAAAATGGT/-|frameshift_variant;GSAP|p.L619*|1|0.21|ENSG00000186088|chr7:77323714-77323714|A/-|frameshift_variant;nc|ENSG00000186088|A4D1B5-2|GSAP;nc|ENSG00000186088|A4D1B5-3|GSAP	35.61828744233558	0.47037581924408073	6				NaN	NaN	0	NaN	2300	2535	4830
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4855	17.066	NaN	118930	30	0	24476	0.214	+			38260	SQNPRFYHK	9	94	392.86859514654526	1175.5839560398358	3	392.8683166503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SQNPRFYHK_	ENSG00000132522|ENST00000380728|GPS2;ENST00000571697.5_1_17:7216077-7216449:-|nuORF;ENST00000573807.5_1_17:7216077-7216773:-|nuORF;ENST00000574458.1_1_17:7216077-7216212:-|nuORF	112.41091882917199	0.026537921851008135	6				NaN	NaN	0	NaN	2315	2538	4854
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4856	17.07	NaN	12104	30	0	2704.4	0.106	+			14372	GTAEPGGSMK	10	73	467.7183444733289	933.4221360134578	2	467.7181091308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTAEPGGSMK_	ENSG00000183963|ENST00000333137|SMTN;ENST00000460658.5_1_22:31484094-31491444:+|nuORF;ENST00000489337.5_1_22:31484532-31494796:+|nuORF;nc|ENSG00000183963|P53814-6|SMTN;nc|ENSG00000183963|P53814|SMTN;SMTN|p.S536Vfs*33|1|0.33|ENSG00000183963|chr22:31091813-31091813|C/-|frameshift_variant	123.20810148215591	0.02279876478776198	6				NaN	NaN	0	NaN	2316	2538	4854
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4857	17.072	NaN	12494	30	0	2612.6	0.106			+	39850	STLLQRYVF	9	64	376.2145656284034	NaN	0	376.2143859863281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STLLQRYVF_	REV__ENST00000593000.1_1_Y:21755200-21755542:+|nuORF	47.657333605630114	0.2228375344433429	6				NaN	NaN	0	NaN	2317	2538	4854
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4858	17.074	NaN	10174	30	0	1787.6	0.106	+			24720	LHNGKIKEQ	9	68	356.20490560046096	1065.5928874015829	3	356.204833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LHNGKIKEQ_	ENSG00000004846|ENST00000404938|ABCB5;nc|ENSG00000004846|Q2M3G0-1|ABCB5	34.172542307311794	0.4838870758800184	6				NaN	NaN	0	NaN	2318	2538	4854
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4859	17.075	NaN	3054.5	30	0	701.57	0.106	+			39415	STDQASAIK	9	54	460.7376215060335	919.4606900788671	2	460.7373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STDQASAIK_	ENSG00000127481|ENST00000375254|UBR4;nc|ENSG00000127481|Q5T4S7-2|UBR4;nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000127481|Q5T4S7-4|UBR4;nc|ENSG00000127481|Q5T4S7-5|UBR4;UBR4|p.C4515Wfs*2|1|0.06|ENSG00000127481|chr1:19095626-19095626|G/-|frameshift_variant;UBR4|p.L4771Cfs*7|1|0.25|ENSG00000127481|chr1:19088878-19088878|G/-|frameshift_variant;UBR4|p.P4047Ifs*4|1|0.4|ENSG00000127481|chr1:19106932-19106933|GG/-|frameshift_variant	68.84614121027924	0.14577793175421136	6				NaN	NaN	0	NaN	2319	2538	4854
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4860	17.077	NaN	17805	30	0	6301.9	0.034	+			38482	SSATETINK	9	78	475.7429869619525	949.471420990705	2	475.7426452636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSATETINK_	ENSG00000096696|ENST00000379802|DSP	185.54966270084765	0.0007389233275946833	6				NaN	NaN	0	NaN	2320	2538	4854
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4861	17.078	NaN	1812.5	30	0	160.25	0.14	+			38943	SSQQEPITK	9	54	509.263526083132	1016.512499233064	2	509.2640686035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSQQEPITK_	ENSG00000022840|ENST00000325954|RNF10;nc|ENSG00000022840|Q8N5U6-2|RNF10	38.753607047826485	0.4348790777924195	6				NaN	NaN	0	NaN	2321	2538	4854
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4879	17.117	NaN	35750	30	0	14542	0.214	+			6358	AVTSGVATK	9	65	417.2399153470605	832.465277760921	2	417.23980712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVTSGVATK_	ENSG00000249992|ENST00000503771|TMEM158;nc|ENSG00000249992|Q8WZ71-2|TMEM158	120.8684288430529	0.02067403653475984	6				NaN	NaN	0	NaN	2336	2541	4878
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4880	17.121	NaN	4198.9	30	0	691.81	0.106	+			5443	ATYREGMTK	9	60	528.7607417648687	1055.5069305965374	2	528.760986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATYREGMTK_	ENSG00000142507|ENST00000270586|PSMB6;ENST00000575643.1_1_17:4701246-4701714:+|nuORF	70.39856735676683	0.13906523160059378	6				NaN	NaN	0	NaN	2337	2541	4878
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4881	17.123	NaN	31984	30	0	12333	0.106	+			22520	KTQEIFHSK	9	90	373.20487445057336	1116.5927939519202	3	373.204833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KTQEIFHSK_	ENSG00000108557|ENST00000353383|RAI1;nc|ENSG00000258436|Q7Z5J4-2|RAI1;nc|ENSG00000258436|Q7Z5J4-3|RAI1	90.60085204095205	0.06317133949006545	6				NaN	NaN	0	NaN	2338	2541	4878
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4882	17.125	NaN	11507	30	0	3170.3	0.106	+			34720	RVYAENAIRKK	11	69	449.9332748217601	1346.7779950654804	3	449.93292236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RVYAENAIRKK_	ENSG00000131165|ENST00000397901|CHMP1A;ENST00000550872.1_1_16:89715668-89724092:-|nuORF	57.148748479083515	0.34890646465650643	6				NaN	NaN	0	NaN	2339	2541	4878
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4883	17.127	NaN	4440.6	30	0	842.77	0.106	+			45500	TYEKTSAD	8	55	457.70874667871504	913.4029404242301	2	457.7083435058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TYEKTSAD_	CON__P00978	57.81127852772723	0.5234495074909924	6				NaN	NaN	0	NaN	2340	2541	4878
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4884	17.128	NaN	7080.8	30	0	1700.4	0.038			+	4615	ATLLPVRWHA	10	46	388.5604617225102	1162.6595557677306	3	388.5596008300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATLLPVRWHA_	REV__ENSG00000169418|ENST00000368680|NPR1;REV__NPR1|p.F763Sfs*37|1|0.08|ENSG00000169418|chr1:153688085-153688085|C/-|frameshift_variant	35.15202426646627	0.5927656479315102	6				NaN	NaN	0	NaN	2341	2541	4878
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4885	17.129	NaN	3150.5	30	0	1279	0.14	+			17105	HSGTIITQK	9	61	492.7768056861724	983.5390584391448	2	492.776611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HSGTIITQK_	ENSG00000083857|ENST00000441802|FAT1;FAT1|p.G2934Vfs*3|2|0.37|ENSG00000083857|chr4:186617787-186617787|T/-|frameshift_variant;FAT1|p.N3847Yfs*7|1|0.03|ENSG00000083857|chr4:186601370-186601371|-/TTATA|frameshift_variant;FAT1|p.P3228Lfs*42|1|0.27|ENSG00000083857|chr4:186611556-186611556|G/-|frameshift_variant;FAT1|p.P4313Lfs*36|1|0.34|ENSG00000083857|chr4:186596602-186596602|G/-|frameshift_variant;FAT1|p.Q2933Hfs*14|1|0.33|ENSG00000083857|chr4:186617787-186617788|-/G|frameshift_variant;FAT1|p.V1878Cfs*8|2|0.22|ENSG00000083857|chr4:186620955-186620956|-/G|frameshift_variant	77.31757898189308	0.1091473830098891	6				NaN	NaN	0	NaN	2342	2541	4878
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4903	17.168	NaN	8270.1	30	0	1063.3	0.214	+			19325	KAHLGTALK	9	63	469.7926390215966	937.5707251099932	2	469.7924499511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAHLGTALK_	ENSG00000186468|ENST00000296674|RPS23;RPS23|p.N39T|1|0.25|ENSG00000186468|chr5:82277741-82277741|T/G|missense_variant	85.86182877749512	0.07653218437724067	6				NaN	NaN	0	NaN	2357	2544	4902
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4904	17.172	NaN	15275	30	0	2881.2	0.106			+	-1	QYGQPCMC	8	87	522.1919105091117	1042.3692680850234	2	522.1928100585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_QYGQPC(Carbamidomethyl (C))MC(Carbamidomethyl (C))_	REV__ENSG00000115380|ENST00000355426|EFEMP1;REV__nc|ENSG00000115380|Q12805-2|EFEMP1;REV__nc|ENSG00000115380|Q12805-3|EFEMP1;REV__nc|ENSG00000115380|Q12805-4|EFEMP1;REV__nc|ENSG00000115380|Q12805-5|EFEMP1	52.29916861842294	0.578018602984656	6				NaN	NaN	0	NaN	2358	2544	4902
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4905	17.174	NaN	4537.8	30	0	721.25	0.106			+	24772	LIDLYITTL	9	47	355.5452678001421	1063.6139740006263	3	355.5451965332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LIDLYITTL_	REV__ENST00000303052.12_2_15:64592761-64592794:-|nuORF	23.04248740728303	0.5879033540491928	6				NaN	NaN	0	NaN	2359	2544	4902
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4906	17.176	NaN	3896	30	0	351.53	0.106	+			39346	STCGKCGYPAK	11	62	557.7540866070807	1113.4936202809613	2	557.7548217773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STCGKCGYPAK_	ENSG00000145592|ENST00000274242|RPL37;ENST00000504562.1_1_5:40832608-40835123:-|nuORF;ENST00000507642.5_1_5:40832592-40834660:-|nuORF	81.52500206392136	0.13965942453989383	6				NaN	NaN	0	NaN	2360	2544	4902
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4907	17.178	NaN	3719.4	30	0	373.29	0.106			+	29602	PFSGVMVQ	8	56	432.71656111351075	863.4185692938215	2	432.7156677246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PFSGVMVQ_	REV__ENSG00000187605|ENST00000409262|TET3;REV__nc|ENSG00000187605|O43151-2|TET3;REV__nc|ENSG00000187605|O43151-3|TET3;REV__TET3|p.A1477Pfs*54|1|0.32|ENSG00000187605|chr2:74101214-74101214|G/-|frameshift_variant;REV__TET3|p.A764Lfs*2|1|0.23|ENSG00000187605|chr2:74048203-74048203|G/-|frameshift_variant;REV__TET3|p.F1385Lfs*17|1|0.17|ENSG00000187605|chr2:74100936-74100936|C/-|frameshift_variant;REV__TET3|p.P728Lfs*38|1|0.25|ENSG00000187605|chr2:74048095-74048095|C/-|frameshift_variant;REV__TET3|p.Q379Rfs*162|2|0.23|ENSG00000187605|chr2:74047047-74047047|C/-|frameshift_variant;REV__TET3|p.S1618Afs*5|2|0.34|ENSG00000187605|chr2:74101634-74101634|C/-|frameshift_variant;REV__TET3|p.T1749Hfs*5|2|0.29|ENSG00000187605|chr2:74102024-74102025|-/G|frameshift_variant;REV__TET3|p.V1242Gfs*44|1|0.4|ENSG00000187605|chr2:74100510-74100511|-/G|frameshift_variant	71.29570347882199	0.39610197767395533	6				NaN	NaN	0	NaN	2361	2544	4902
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4908	17.18	NaN	8469.6	30	0	2363.9	0.038			+	-1	ATIMEEIEQL	10	50	398.19765979966974	1191.5711499992092	3	398.1974792480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_ATIM(Oxidation (M))EEIEQL_	REV__ENSG00000186141|ENST00000334163|POLR3C	27.047317107675042	0.6589519614906109	6				NaN	NaN	0	NaN	2362	2544	4902
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4909	17.18	NaN	11668	30	0	2034.7	0.141			+	22781	KVFDVRDLV	9	73	545.8165347928671	1089.618516652534	2	545.8167724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KVFDVRDLV_	REV__ENSG00000083067|ENST00000677713|TRPM3;REV__ENSG00000134160|ENST00000256552|TRPM1;REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF;REV__nc|ENSG00000083067|Q9HCF6-10|TRPM3;REV__nc|ENSG00000083067|Q9HCF6-11|TRPM3;REV__nc|ENSG00000083067|Q9HCF6-2|TRPM3;REV__nc|ENSG00000083067|Q9HCF6-4|TRPM3;REV__nc|ENSG00000083067|Q9HCF6-5|TRPM3;REV__nc|ENSG00000083067|Q9HCF6-6|TRPM3;REV__nc|ENSG00000083067|Q9HCF6-7|TRPM3;REV__nc|ENSG00000083067|Q9HCF6-8|TRPM3;REV__nc|ENSG00000083067|Q9HCF6|TRPM3;REV__nc|ENSG00000134160|Q7Z4N2-2|TRPM1;REV__nc|ENSG00000134160|Q7Z4N2-3|TRPM1;REV__nc|ENSG00000134160|Q7Z4N2-5|TRPM1;REV__nc|ENSG00000134160|Q7Z4N2|TRPM1;REV__TRPM1|p.Q811Tfs*12|1|0.28|ENSG00000134160|chr15:31037785-31037786|-/T|frameshift_variant;REV__TRPM1|p.T760Pfs*110|2|0.19|ENSG00000134160|chr15:31038140-31038140|G/-|frameshift_variant;REV__TRPM3|p.S1466Ffs*8|1|0.04|ENSG00000083067|chr9:70536682-70536683|-/CGTTCCAAAA|frameshift_variant	154.1183686248401	0.005909203230691971	6				NaN	NaN	0	NaN	2363	2544	4902
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4927	17.22	NaN	8020.3	30	0	1128.2	0.214	+			32945	REAVEQQKV	9	68	543.7988920448116	1085.5832311564232	2	543.7991943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_REAVEQQKV_	ENSG00000125844|ENST00000377813|RRBP1;nc|ENSG00000125844|Q9P2E9-3|RRBP1;RRBP1|p.A628Gfs*69|1|0.35|ENSG00000125844|chr20:17621915-17621916|-/T|frameshift_variant	106.88024417677582	0.032181361622142884	6				NaN	NaN	0	NaN	2378	2547	4926
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4928	17.223	NaN	89695	30	0	40121	0.106	+			35160	SAIDKMTKK	9	74	341.1950822599882	1020.5634173801648	3	341.1952209472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAIDKMTKK_	CTNNA1|p.K493Nfs*31|1|0.19|ENSG00000044115|chr5:138917827-138917827|A/-|frameshift_variant;CTNNA1|p.T832*|1|0.29|ENSG00000044115|chr5:138933859-138933862|CAGA/-|frameshift_variant;ENSG00000044115|ENST00000302763|CTNNA1;ENST00000515849.2_1_5:114726864-114727050:-|nuORF;ENST00000517534.5_1_5:138163374-138223382:+|nuORF;nc|ENSG00000044115|P35221-2|CTNNA1	77.31757898189308	0.1091473830098891	6				NaN	NaN	0	NaN	2379	2547	4926
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4929	17.225	NaN	3850.3	30	0	860.58	0.106	+			45188	TVMTQSTAK	9	54	483.7501486752992	965.4857444173985	2	483.7498474121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVMTQSTAK_	ENSG00000139793|ENST00000679496|MBNL2	46.45678178249821	0.34452392205506005	6				NaN	NaN	0	NaN	2380	2547	4926
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4930	17.227	NaN	5254.5	30	0	2257.4	0.106			+	-1	ATVVKKMTAG	10	62	511.2892872804094	1020.5640216276188	2	511.289306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_ATVVKKM(Oxidation (M))TAG_	REV__tr|U7SIY0|U7SIY0_FUSNUAminobenzoyl-glutamatetransporterOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02271PE=4SV=1	52.936696900407355	0.4300801048568001	6				NaN	NaN	0	NaN	2381	2547	4926
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4931	17.229	NaN	5572.7	30	0	700.12	0.106	+			16346	HELDTQLK	8	71	492.2616479477063	982.5087429622126	2	492.26153564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HELDTQLK_	ENSG00000055609|ENST00000262189|KMT2C;KMT2C|p.F4496Lfs*21|3|0.28|ENSG00000055609|chr7:152148439-152148439|A/-|frameshift_variant;KMT2C|p.I4868Lfs*37|1|0.28|ENSG00000055609|chr7:152138837-152138837|T/-|frameshift_variant;KMT2C|p.K1164Rfs*17|1|0.4|ENSG00000055609|chr7:152222008-152222009|TT/-|frameshift_variant;KMT2C|p.K1247Nfs*56|1|0.22|ENSG00000055609|chr7:152207400-152207400|T/-|frameshift_variant;KMT2C|p.K2867Dfs*7|1|0.28|ENSG00000055609|chr7:152176853-152176854|TT/-|frameshift_variant;KMT2C|p.P2292Hfs*13|1|0.25|ENSG00000055609|chr7:152180985-152180985|G/-|frameshift_variant;KMT2C|p.S2816Ifs*6|1|0.44|ENSG00000055609|chr7:152177007-152177008|-/T|frameshift_variant;KMT2C|p.T3715Qfs*4|1|0.34|ENSG00000055609|chr7:152162434-152162434|T/-|frameshift_variant;nc|ENSG00000055609|Q8NEZ4-2|KMT2C;nc|ENSG00000055609|Q8NEZ4-3|KMT2C	76.84663266511073	0.3498490246073164	6				NaN	NaN	0	NaN	2382	2547	4926
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4932	17.231	NaN	1628.9	30	0	215.37	0.035			+	12053	GAAADQGGVVR	11	52	500.76255287917996	999.51055282516	2	500.8290710449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GAAADQGGVVR_	REV__ENSG00000189099|ENST00000455694|PRSS48;REV__PRSS48|p.K260Nfs*13|1|0.49|ENSG00000189099|chr4:151291242-151291242|A/-|frameshift_variant	47.95952297671804	0.44903247279694136	6				NaN	NaN	0	NaN	2383	2547	4926
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4933	17.231	NaN	2934	30	0	447.88	0.14			+	8626	EDAREEER	8	51	517.2308728798228	1032.4471928264454	2	517.2313232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EDAREEER_	REV__ENST00000489337.5_1_22:31484532-31494796:+|nuORF;REV__ENST00000493335.5_1_22:31492537-31494796:+|nuORF	71.29570347882199	0.39610197767395533	6				NaN	NaN	0	NaN	2384	2547	4926
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4951	17.269	NaN	151570	30	0	96825	0.214	+			17192	HTSTVLTTK	9	102	494.2771984144755	986.539843895751	2	494.2767639160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HTSTVLTTK_	ENSG00000117983|ENST00000529681|MUC5B;ENSG00000117983|ENST00000529681|MUC5B;MUC5B|p.P3417Qfs*3|1|0.41|ENSG00000117983|chr11:1247125-1247125|C/-|frameshift_variant;MUC5B|p.S3126Pfs*13|1|0.37|ENSG00000117983|chr11:1246251-1246251|C/-|frameshift_variant;MUC5B|p.S3878Pfs*27|1|0.13|ENSG00000117983|chr11:1248507-1248507|C/-|frameshift_variant;MUC5B|p.S4017Lfs*56|1|0.22|ENSG00000117983|chr11:1248928-1248929|-/C|frameshift_variant;MUC5B|p.T4706Pfs*4|2|0.37|ENSG00000117983|chr11:1250996-1250996|A/-|frameshift_variant;MUC5B|p.T4706Pfs*4|2|0.37|ENSG00000117983|chr11:1250996-1250996|A/-|frameshift_variant	159.27591364854348	0.004707062175358555	6				NaN	NaN	0	NaN	2399	2550	4950
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4952	17.273	NaN	4394	30	0	756.74	0.106	+			13545	GLSLGPGAAA	10	55	407.2270132078486	812.4394734824972	2	407.22674560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GLSLGPGAAA_	ENSG00000112812|ENST00000230582|PRSS16;PRSS16|p.G318Afs*30|1|0.4|ENSG00000112812|chr6:27251981-27251981|G/-|frameshift_variant	35.61828744233558	0.588957954432594	6				NaN	NaN	0	NaN	2400	2550	4950
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4953	17.275	NaN	2417.1	30	0	263.99	0.106	+			24807	LIMLIFLGH	9	42	352.880519400028	1055.619728800284	3	352.8805236816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LIMLIFLGH_	ENSG00000162706|ENST00000368125|CADM3;nc|ENSG00000162706|Q8N126-2|CADM3;nc|ENSG00000162706|Q8N126-3|CADM3	21.70233525837049	0.6004277881119521	6				NaN	NaN	0	NaN	2401	2550	4950
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4954	17.277	NaN	2430.8	30	0	485.6	0.106			+	-1	SIPSCPNPLL	10	36	366.5260691006448	NaN	0	366.8961181640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_SIPSC(Carbamidomethyl (C))PNPLL_	REV__ENSG00000150510|ENST00000322475|FAM124A;REV__nc|ENSG00000150510|Q86V42-2|FAM124A;REV__nc|ENSG00000150510|Q86V42-3|FAM124A	23.52269567125451	0.42010282974921537	6				NaN	NaN	0	NaN	2402	2550	4950
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4955	17.279	NaN	1638.6	30	0	145.45	0.106				-1	RLVVLVGPMG	10	59	528.8173828125	NaN	0	528.8173828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_RLVVLVGPM(Oxidation (M))G_	MPP7|p.V377M|1|0.4|ENSG00000150054|chr10:28069847-28069847|C/T|missense_variant	30.503639358989545	0.4000169810673414	6				NaN	NaN	0	NaN	2403	2550	4950
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4956	17.281	NaN	3427.2	30	0	1428.8	0.037			+	10018	ERSEKNEIK	9	47	378.2024949398616	1131.5856554197849	3	378.2022705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ERSEKNEIK_	REV__ENSG00000013725|ENST00000313421|CD6;REV__nc|ENSG00000013725|P30203-2|CD6;REV__nc|ENSG00000013725|P30203-3|CD6;REV__nc|ENSG00000013725|P30203-4|CD6;REV__nc|ENSG00000013725|P30203-5|CD6;REV__nc|ENSG00000013725|P30203-6|CD6;REV__nc|ENSG00000013725|P30203-7|CD6	65.46538089061403	0.16805504838372562	6				NaN	NaN	0	NaN	2404	2550	4950
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4957	17.281	NaN	2876.6	30	0	355.49	0.143	+			18753	ITLIGLFFAGI	11	50	388.9042679697271	NaN	0	388.9043884277344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ITLIGLFFAGI_	ENSG00000205423|ENST00000427478|CNEP1R1;ENST00000566482.5_1_16:50060318-50068094:+|nuORF;nc|ENSG00000205423|Q8N9A8-2|CNEP1R1	37.50817390946774	0.39825797133360086	6				NaN	NaN	0	NaN	2405	2550	4950
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4975	17.319	NaN	37994	30	0	11689	0.214	+			390	AASEAGRAM	9	101	432.20533734899885	862.3961217647977	2	432.20526123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AASEAGRAM_	ENSG00000071859|ENST00000393600|FAM50A	77.31757898189308	0.1091473830098891	6				NaN	NaN	0	NaN	2420	2553	4974
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4976	17.323	NaN	22353	30	0	6464.2	0.106	+			15090	GTQGSPITK	9	69	444.74287005809975	887.4711871829995	2	444.74237060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTQGSPITK_	ENSG00000110237|ENST00000263674|ARHGEF17;ENST00000536481.1_1_11:73075528-73075729:+|nuORF	143.37361013837676	0.008897369944672323	6				NaN	NaN	0	NaN	2421	2553	4974
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4977	17.325	NaN	18089	30	0	2225.2	0.106	+			21482	KNKDKVSLK	9	84	353.88873223448746	1058.6443673036624	3	353.8886413574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KNKDKVSLK_	tr|U7SWR9|U7SWR9_FUSNUSignalpeptidepeptidaseSppA,67KtypeOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01151PE=3SV=1	30.317721548370564	0.5199124245378496	6				NaN	NaN	0	NaN	2422	2553	4974
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4978	17.327	NaN	15503	30	0	2718.4	0.106	+			34300	RTLNKVAMK	9	69	530.8182643768652	1059.6219758205302	2	530.8187866210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RTLNKVAMK_	COPG1|p.V308I|1|0.46|ENSG00000181789|chr3:129260383-129260383|G/A|missense_variant;ENSG00000158623|ENST00000425248|COPG2;ENSG00000181789|ENST00000314797|COPG1;nc|ENSG00000158623|Q9UBF2-2|COPG2	70.8162118820467	0.13725933411854815	6				NaN	NaN	0	NaN	2423	2553	4974
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4979	17.329	NaN	3146	30	0	1114.9	0.106				-1	VLAICLMLQ	9	34	368.2049253202821	1101.5929465610463	3	368.2048645019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))VLAIC(Carbamidomethyl (C))LMLQ_	ENST00000244061.5_1_20:48568687-48568888:+|nuORF	19.996771675451527	0.6112419832031292	6				NaN	NaN	0	NaN	2424	2553	4974
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4980	17.331	NaN	5301.4	30	0	1553.6	0.034				-1	 	0	54	453.19749461723603	904.3804363012721	2	453.197021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2425	2553	4974
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4981	17.331	NaN	1138.4	30	0	210.48	0.141	+			20451	KEVEERPAP	9	47	527.7800563547668	1053.5455597763334	2	527.7800903320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KEVEERPAP_	ENSG00000130429|ENST00000646101|ARPC1B	61.691277971877994	0.19951612995419254	6				NaN	NaN	0	NaN	2426	2553	4974
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4992	17.357	NaN	9094.4	30	0	2351.9	0.214	+			34301	RTLNKVAMK	9	63	354.2145835651504	1059.6219212956512	3	354.21466064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTLNKVAMK_	COPG1|p.V308I|1|0.46|ENSG00000181789|chr3:129260383-129260383|G/A|missense_variant;ENSG00000158623|ENST00000425248|COPG2;ENSG00000181789|ENST00000314797|COPG1;nc|ENSG00000158623|Q9UBF2-2|COPG2	77.31757898189308	0.1091473830098891	6				NaN	NaN	0	NaN	2434	2556	4991
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4993	17.36	NaN	9928.2	30	0	2022.3	0.106	+			35105	SAGDVAVQK	9	74	437.7353210453509	873.4560891575018	2	437.73492431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAGDVAVQK_	ENSG00000164574|ENST00000297107|GALNT10;ENST00000517958.1_1_5:153783698-153796529:+|nuORF;ENST00000520647.5_1_5:153755841-153792087:+|nuORF;nc|ENSG00000164574|Q86SR1-2|GALNT10;nc|ENSG00000164574|Q86SR1-4|GALNT10	117.81106730687013	0.02252488733980868	6				NaN	NaN	0	NaN	2435	2556	4991
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4994	17.362	NaN	4490.8	30	0	667.4	0.106	+			16172	HEAKIKSL	8	61	463.2768005761758	924.5390482191516	2	463.2766418457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HEAKIKSL_	ENSG00000168280|ENST00000435030|KIF5C;ENSG00000170759|ENST00000302418|KIF5B;ENST00000460377.1_2:149835462-149853923:+|nuORF;KIF5C|p.S816Vfs*68|1|0.35|ENSG00000168280|chr2:149005459-149005459|A/-|frameshift_variant;nc|ENSG00000168280|O60282-2|KIF5C	71.87747018426188	0.391254423828572	6				NaN	NaN	0	NaN	2436	2556	4991
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4995	17.364	NaN	2700.5	30	0	315.32	0.106			+	10067	ESHNNKKR	8	56	506.7690548232627	NaN	0	506.76910400390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ESHNNKKR_	REV__ENSG00000197579|ENST00000360538|TOPORS;REV__nc|ENSG00000197579|Q9NS56-2|TOPORS	45.9519527083369	1.7418937515398478	6				NaN	NaN	0	NaN	2437	2556	4991
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4996	17.366	NaN	1939.3	30	0	205.23	0.106			+	-1	CPGAPSAGLGA	11	54	479.2264163200931	NaN	0	479.2266540527344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_C(Carbamidomethyl (C))PGAPSAGLGA_	REV__ADAMTS7|p.L864Wfs*93|2|0.38|ENSG00000136378|chr15:78768188-78768188|G/-|frameshift_variant	27.882242232435846	0.44115667141176046	6				NaN	NaN	0	NaN	2438	2556	4991
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4997	17.368	NaN	4308.6	30	0	1613.3	0.106	+			45025	TVFPKAKQVKK	11	52	425.2711616889488	1272.7916556670464	3	425.2710266113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TVFPKAKQVKK_	DDX21|p.I198Hfs*12|1|0.07|ENSG00000165732|chr10:68962140-68962141|-/ACATCACT|frameshift_variant;DDX21|p.N117Mfs*9|1|0.26|ENSG00000165732|chr10:68960063-68960063|A/-|frameshift_variant;ENSG00000165732|ENST00000354185|DDX21	33.03940026070387	0.6432348334061824	6				NaN	NaN	0	NaN	2439	2556	4991
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4998	17.369	NaN	2797.7	30	0	294.23	0.042	+			10009	ERPRRQRPTRP	11	56	483.6158584405096	1447.8257459217289	3	483.6159362792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ERPRRQRPTRP_	ENSG00000117523|ENST00000647382|PRRC2C;nc|ENSG00000117523|Q9Y520-2|PRRC2C;nc|ENSG00000117523|Q9Y520-3|PRRC2C;nc|ENSG00000117523|Q9Y520-4|PRRC2C;nc|ENSG00000117523|Q9Y520-5|PRRC2C;nc|ENSG00000117523|Q9Y520-6|PRRC2C;nc|ENSG00000117523|Q9Y520|PRRC2C;PRRC2C|p.P2791Lfs*5|1|0.1|ENSG00000117523|chr1:171591761-171591761|C/-|frameshift_variant	21.780426970141523	0.7613322811393133	6				NaN	NaN	0	NaN	2440	2556	4991
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5016	17.406	NaN	7622.5	30	0	2850.6	0.214	+			14693	GTIGKKFAR	9	63	489.29822908450006	976.5819052358001	2	489.2980651855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTIGKKFAR_	ENSG00000135698|ENST00000258169|MPHOSPH6	101.45984612302182	0.0377122763612125	6				NaN	NaN	0	NaN	2455	2559	5015
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5017	17.409	NaN	19690	30	0	4493.1	0.106	+			44483	TSRSTLIE	8	75	453.74810773746685	905.4816625417337	2	453.74798583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TSRSTLIE_	ENSG00000267041|ENST00000591344|ZNF850	82.24051045832904	0.30490469762271794	6				NaN	NaN	0	NaN	2456	2559	5015
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5018	17.412	NaN	39375	30	0	16688	0.106			+	35211	SAKRSGFDIG	10	53	346.51727432890766	1036.529993586923	3	346.5173034667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAKRSGFDIG_	REV__ENSG00000250423|ENST00000691062|KIAA1210;REV__nc|ENSG00000250423|Q9ULL0|KIAA1210	68.84614121027924	0.2867470276772903	6				NaN	NaN	0	NaN	2457	2559	5015
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5019	17.413	NaN	9255.5	30	0	2357.3	0.106			+	17476	ICQLPQGTL	9	73	486.76438741340877	971.5142218936176	2	486.7643737792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ICQLPQGTL_	REV__ENSG00000105325|ENST00000441788|FZR1;REV__ENST00000586212.1_1_19:3532513-3533660:+|nuORF;REV__nc|ENSG00000105325|Q9UM11-3|FZR1;REV__nc|ENSG00000105325|Q9UM11|FZR1	49.44154591367651	0.3095138337212152	6				NaN	NaN	0	NaN	2458	2559	5015
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5020	17.415	NaN	5908.8	30	0	1408.8	0.106			+	31344	QISSQAPK	8	55	429.7375885771292	857.4606242210584	2	429.73748779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QISSQAPK_	REV__ENSG00000176177|ENST00000325157|ENTHD1	51.33545320467046	0.5859736979383976	6				NaN	NaN	0	NaN	2459	2559	5015
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5021	17.417	NaN	1817.6	30	0	299.38	0.036			+	22985	KVSDGELVKK	10	61	551.8270171111035	1101.6394812890069	2	551.8272705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KVSDGELVKK_	REV__ENSG00000120729|ENST00000239926|MYOT;REV__nc|ENSG00000120729|Q9UBF9-2|MYOT;REV__nc|ENSG00000120729|Q9UBF9|MYOT	79.48907831485694	0.19979514868675113	6				NaN	NaN	0	NaN	2460	2559	5015
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5022	17.418	NaN	3550.9	30	0	438.56	0.145			+	18139	ILKCRNVGPQ	10	51	376.5495969889787	1126.626961567136	3	376.5490417480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ILKCRNVGPQ_	REV__DACH1|p.R518Gfs*25|1|0.29|ENSG00000276644|chr13:71557042-71557042|T/-|frameshift_variant;REV__DACH1|p.T596Nfs*2|1|0.28|ENSG00000276644|chr13:71479252-71479253|-/T|frameshift_variant;REV__DACH2|p.I497Kfs*24|1|0.17|ENSG00000126733|chrX:86813216-86813217|-/AG|frameshift_variant;REV__DACH2|p.T525Pfs*33|2|0.19|ENSG00000126733|chrX:86814717-86814717|A/-|frameshift_variant;REV__ENSG00000126733|ENST00000373125|DACH2;REV__ENSG00000276644|ENST00000613252|DACH1;REV__nc|ENSG00000126733|Q96NX9-2|DACH2;REV__nc|ENSG00000276644|Q9UI36-3|DACH1;REV__nc|ENSG00000276644|Q9UI36-4|DACH1;REV__nc|ENSG00000276644|Q9UI36|DACH1	42.86426827375447	0.522752283233888	6				NaN	NaN	0	NaN	2461	2559	5015
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5040	17.457	NaN	25573	30	0	1708.7	0.214	+			38284	SQQKVVITK	9	82	515.8164771421295	1029.618401351059	2	515.816650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SQQKVVITK_	ENSG00000007952|ENST00000372966|NOX1;ENSG00000165168|ENST00000378588|CYBB;nc|ENSG00000007952|Q9Y5S8-3|NOX1;NOX1|p.R290H|1|0.17|ENSG00000007952|chrX:100851261-100851261|C/T|missense_variant	150.81021883065287	0.006680279908938716	6				NaN	NaN	0	NaN	2476	2562	5039
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5041	17.461	NaN	22471	30	0	8268.7	0.106	+			20130	KEKLSKSE	8	88	474.7715153029988	947.5284776727976	2	474.7711486816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEKLSKSE_	CASP8AP2|p.D1810Mfs*3|1|0.43|ENSG00000118412|chr6:89868711-89868711|A/-|frameshift_variant;CASP8AP2|p.E1628Mfs*58|1|0.49|ENSG00000118412|chr6:89868163-89868164|-/AT|frameshift_variant;CASP8AP2|p.N1236Ifs*9|1|0.3|ENSG00000118412|chr6:89866990-89866990|A/-|frameshift_variant;CASP8AP2|p.N1917Kfs*4|1|0.24|ENSG00000118412|chr6:89869034-89869035|-/A|frameshift_variant;ENSG00000118412|ENST00000551025|CASP8AP2;ENST00000237177.10_1_6:90556308-90583533:+|nuORF;nc|ENSG00000118412|Q9UKL3|CASP8AP2	116.90359126533652	0.23898233959989007	6				NaN	NaN	0	NaN	2477	2562	5039
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5042	17.463	NaN	1923.6	30	0	288.4	0.106	+			31423	QKLWKSYVK	9	56	590.3458458380028	NaN	0	590.3458862304688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QKLWKSYVK_	ENSG00000113360|ENST00000344624|DROSHA;ENST00000509608.1_1_5:31464267-31468068:-|nuORF;nc|ENSG00000113360|Q9NRR4-2|DROSHA;nc|ENSG00000113360|Q9NRR4-3|DROSHA;nc|ENSG00000113360|Q9NRR4-4|DROSHA	45.02220120713402	0.24099765136254067	6				NaN	NaN	0	NaN	2478	2562	5039
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5043	17.465	NaN	4914.3	30	0	650.34	0.106	+			34678	RVSNVKSVYK	10	62	393.8998533895366	1178.6777307688099	3	393.8995666503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RVSNVKSVYK_	ENSG00000104738|ENST00000649973|MCM4;MCM4|p.T629Qfs*18|2|0.31|ENSG00000104738|chr8:47971419-47971419|A/-|frameshift_variant	43.41853373365257	0.517645004642704	6				NaN	NaN	0	NaN	2479	2562	5039
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5044	17.466	NaN	892.71	30	0	112.09	0.106	+			10068	ESHQNGILK	9	42	513.2725219726562	NaN	0	513.2725219726562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ESHQNGILK_	ENSG00000069188|ENST00000392650|SDK2;ENST00000479356.1_1_17:71354047-71433905:-|nuORF;nc|ENSG00000069188|Q58EX2-2|SDK2;nc|ENSG00000069188|Q58EX2-3|SDK2;nc|ENSG00000069188|Q58EX2-4|SDK2;SDK2|p.P1324Lfs*69|1|0.1|ENSG00000069188|chr17:73391466-73391466|G/-|frameshift_variant;SDK2|p.R1007Afs*3|1|0.43|ENSG00000069188|chr17:73399242-73399242|G/-|frameshift_variant;SDK2|p.R2017Gfs*28|1|0.29|ENSG00000069188|chr17:73348716-73348716|G/-|frameshift_variant;SDK2|p.S1083Vfs*66|2|0.32|ENSG00000069188|chr17:73398143-73398143|G/-|frameshift_variant;SDK2|p.T1715Pfs*21|1|0.11|ENSG00000069188|chr17:73368432-73368432|G/-|frameshift_variant	34.172542307311794	0.30503706118289736	6				NaN	NaN	0	NaN	2480	2562	5039
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5045	17.468	NaN	8006.9	30	0	2443.9	0.038	+			29069	NTITMIPNTLT	11	52	406.88437800628736	1217.6313046190621	3	406.8837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NTITMIPNTLT_	ENSG00000146938|ENST00000381095|NLGN4X;nc|ENSG00000146938|Q8N0W4-2|NLGN4X	42.33807565288922	0.5259510355945483	6				NaN	NaN	0	NaN	2481	2562	5039
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5046	17.469	NaN	1571.2	30	0	211.4	0.143			+	11694	FRPFIATMLA	10	30	389.5519714355469	NaN	0	389.5519714355469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FRPFIATMLA_	REV__ENSG00000126091|ENST00000347631|ST3GAL3;REV__ENST00000461375.1_1_1:44280573-44366462:+|nuORF;REV__nc|ENSG00000126091|Q11203-10|ST3GAL3;REV__nc|ENSG00000126091|Q11203-12|ST3GAL3;REV__nc|ENSG00000126091|Q11203-13|ST3GAL3;REV__nc|ENSG00000126091|Q11203-14|ST3GAL3;REV__nc|ENSG00000126091|Q11203-15|ST3GAL3;REV__nc|ENSG00000126091|Q11203-16|ST3GAL3;REV__nc|ENSG00000126091|Q11203-17|ST3GAL3;REV__nc|ENSG00000126091|Q11203-18|ST3GAL3;REV__nc|ENSG00000126091|Q11203-19|ST3GAL3;REV__nc|ENSG00000126091|Q11203-2|ST3GAL3;REV__nc|ENSG00000126091|Q11203-20|ST3GAL3;REV__nc|ENSG00000126091|Q11203-23|ST3GAL3;REV__nc|ENSG00000126091|Q11203-24|ST3GAL3;REV__nc|ENSG00000126091|Q11203-3|ST3GAL3;REV__nc|ENSG00000126091|Q11203-4|ST3GAL3;REV__nc|ENSG00000126091|Q11203-5|ST3GAL3;REV__nc|ENSG00000126091|Q11203-6|ST3GAL3;REV__nc|ENSG00000126091|Q11203-8|ST3GAL3	22.579656572578934	0.4201028297492154	6				NaN	NaN	0	NaN	2482	2562	5039
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5064	17.508	NaN	41195	30	0	6639.5	0.215	+			22101	KSMNANTITK	10	91	554.2946854503293	1106.5748179674586	2	554.29541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSMNANTITK_	ENSG00000175467|ENST00000312397|SART1	211.86364237720122	9.885642590113296E-10	6				NaN	NaN	0	NaN	2497	2565	5063
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5065	17.512	NaN	10150	30	0	866.42	0.106			+	6222	AVQTPNTFVT	10	78	539.2811752196383	1076.5477975060764	2	539.2816162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVQTPNTFVT_	REV__ENSG00000020633|ENST00000308873|RUNX3;REV__nc|ENSG00000020633|Q13761-2|RUNX3	45.97224482568171	0.49411383603842696	6				NaN	NaN	0	NaN	2498	2565	5063
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5066	17.514	NaN	12875	30	0	7070.2	0.106	+			33495	RKHLAPNLS	9	67	518.3070068359375	NaN	0	518.3070068359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RKHLAPNLS_	ENST00000402966.1_1_22:42093436-42094048:+|nuORF	49.44154591367651	0.21054156626303966	6				NaN	NaN	0	NaN	2499	2565	5063
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5067	17.516	NaN	11568	30	0	1768.2	0.106	+			22055	KSKERKPE	8	76	501.2893716323993	NaN	0	501.32696533203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KSKERKPE_	DLGAP2|p.T341Hfs*6|1|0.11|ENSG00000198010|chr8:1565708-1565709|-/C|frameshift_variant;ENSG00000198010|ENST00000637795|DLGAP2;nc|ENSG00000198010|Q9P1A6-2|DLGAP2;nc|ENSG00000198010|Q9P1A6-3|DLGAP2;nc|ENSG00000198010|Q9P1A6|DLGAP2	67.49366992349736	1.7418937515398478	6				NaN	NaN	0	NaN	2500	2565	5063
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5068	17.518	NaN	10035	30	0	2021.2	0.106	+			36123	SEKNRRLCQ	9	55	397.5405056278869	1189.5996874838606	3	397.5403137207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_SEKNRRLC(Carbamidomethyl (C))Q_	ANGPTL1|p.W318Lfs*22|1|0.15|ENSG00000116194|chr1:178853660-178853661|-/C|frameshift_variant	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	2501	2565	5063
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5069	17.52	NaN	2256.1	30	0	527.59	0.033	+			7991	DTAKAAGPL	9	47	422.2322878688023	842.4500228044046	2	422.2320251464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DTAKAAGPL_	ENSG00000112357|ENST00000318471|PEX7;nc|ENSG00000112357|O00628-2|PEX7	42.396135135203025	0.392153681582562	6				NaN	NaN	0	NaN	2502	2565	5063
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5070	17.52	NaN	16138	30	0	5288.4	0.141	+			20930	KKAKGDVKK	9	69	334.55365551393425	NaN	0	334.55364990234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KKAKGDVKK_	ENSG00000052749|ENST00000370992|RRP12;ENST00000479481.5_1_10:99116853-99131081:-|nuORF;ENST00000491313.5_1_10:99116853-99127090:-|nuORF;nc|ENSG00000052749|Q5JTH9-2|RRP12;nc|ENSG00000052749|Q5JTH9-3|RRP12	40.05817265558897	0.275207446262312	6				NaN	NaN	0	NaN	2503	2565	5063
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5088	17.557	NaN	20409	30	0	3352.8	0.214	+			32967	REDQKPVM	8	68	501.75554927039207	1001.4965456075842	2	501.7552795410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_REDQKPVM_	ENSG00000019582|ENST00000009530|CD74;ENST00000517791.1_1_5:149786694-149792396:-|nuORF;ENST00000522153.1_1_5:149786338-149792312:-|nuORF;ENST00000523836.5_1_5:149785806-149792312:-|nuORF;nc|ENSG00000019582|P04233-2|CD74;nc|ENSG00000019582|P04233-3|CD74	62.107414245175825	0.4809183816468817	6				NaN	NaN	0	NaN	2518	2568	5087
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5089	17.56	NaN	12887	30	0	1956.9	0.106	+			16381	HENESVYKA	9	82	538.7543393666989	NaN	0	538.7542724609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HENESVYKA_	ENSG00000182481|ENST00000330459|KPNA2;ENST00000578492.5_1_17:62746826-62750158:-|nuORF	123.20810148215591	0.0016355521601317592	6				NaN	NaN	0	NaN	2519	2568	5087
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5090	17.562	NaN	5544.9	30	0	1606.9	0.106	+			4262	ATGESIAVKK	10	43	335.1975510174167	1002.5708236524501	3	335.19757080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATGESIAVKK_	DCLRE1C|p.R685Efs*6|1|0.37|ENSG00000152457|chr10:14908434-14908434|T/-|frameshift_variant;ENSG00000152457|ENST00000378278|DCLRE1C;nc|ENSG00000152457|Q96SD1-2|DCLRE1C;nc|ENSG00000152457|Q96SD1-3|DCLRE1C	37.50817390946774	0.5721060100277453	6				NaN	NaN	0	NaN	2520	2568	5087
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5091	17.564	NaN	6263.7	30	0	921.18	0.106			+	22388	KTIGVACIK	9	69	466.78214374696313	931.5497345607263	2	466.779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTIGVACIK_	REV__ENSG00000124207|ENST00000262982|CSE1L;REV__ENST00000469700.1_1_20:47707305-47712721:+|nuORF;REV__nc|ENSG00000124207|P55060-3|CSE1L;REV__nc|ENSG00000124207|P55060-4|CSE1L	75.04331003522576	0.118981335847003	6				NaN	NaN	0	NaN	2521	2568	5087
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5092	17.566	NaN	48158	30	0	14713	0.106	+			4744	ATMPKKGILKK	11	88	405.59324845833765	NaN	0	405.5931701660156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATMPKKGILKK_	ENSG00000074590|ENST00000261402|NUAK1;NUAK1|p.P507Rfs*6|1|0.5|ENSG00000074590|chr12:106067268-106067268|G/-|frameshift_variant	82.83050618871818	0.06837965047298598	6				NaN	NaN	0	NaN	2522	2568	5087
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5093	17.568	NaN	2570.8	30	0	305.73	0.037				-1	VTFRCVALVA	10	47	379.215576171875	NaN	0	379.215576171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_VTFRC(Carbamidomethyl (C))VALVA_	ENST00000480100.3_1_9:140000303-140000768:+|nuORF;ENST00000535028.5_1_9:140000303-140001810:+|nuORF	28.081489160057373	0.40797012399963245	6				NaN	NaN	0	NaN	2523	2568	5087
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5094	17.568	NaN	1332.1	30	0	303.49	0.14	+			44509	TSSVFMSLH	9	50	504.74587434516775	1007.4771957571355	2	504.7455749511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TSSVFMSLH_	ENST00000376723.7_1_2:128948434-128948581:+|nuORF	45.9519527083369	0.35044536499095585	6				NaN	NaN	0	NaN	2524	2568	5087
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5112	17.608	NaN	53628	30	0	15108	0.214	+			14217	GSSKIAIQK	9	95	466.28199764398045	NaN	0	466.28204345703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSSKIAIQK_	DNAH14|p.I2559Nfs*2|1|0.39|ENSG00000185842|chr1:225337448-225337449|-/A|frameshift_variant;DNAH14|p.K396Rfs*4|1|0.25|ENSG00000185842|chr1:225023636-225023637|AA/-|frameshift_variant;DNAH14|p.K466Rfs*42|2|0.29|ENSG00000185842|chr1:225023841-225023841|A/-|frameshift_variant;DNAH14|p.T2021Hfs*9|1|0.38|ENSG00000185842|chr1:225289906-225289906|A/-|frameshift_variant;DNAH14|p.V536Yfs*11|1|0.03|ENSG00000185842|chr1:225042893-225042894|-/ATAC|frameshift_variant;ENSG00000185842|ENST00000682510|DNAH14;nc|ENSG00000185842|Q0VDD8-2|DNAH14;nc|ENSG00000185842|Q0VDD8-3|DNAH14;nc|ENSG00000185842|Q0VDD8-4|DNAH14;nc|ENSG00000185842|Q0VDD8|DNAH14	150.36159442982594	0.0026033977239465623	6				NaN	NaN	0	NaN	2539	2571	5111
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5113	17.611	NaN	7535.1	30	0	1242.7	0.106	+			44700	TTKDIVYSLLS	11	63	413.89846064100317	1238.6735525232095	3	413.8983154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTKDIVYSLLS_	tr|U7T245|U7T245_FUSNUUDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanineligaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=murFPE=3SV=1	29.550750289552195	0.6798279264880025	6				NaN	NaN	0	NaN	2540	2571	5111
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5114	17.614	NaN	1483.1	30	0	170.07	0.106	+			34350	RTQEEIVAK	9	50	537.3006282692471	1072.5867036052941	2	537.3016967773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RTQEEIVAK_	ENSG00000155660|ENST00000652332|PDIA4	61.691277971877994	0.19951612995419254	6				NaN	NaN	0	NaN	2541	2571	5111
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5115	17.615	NaN	3595.7	30	0	873.1	0.106	+			42330	TAGGKGTPL	9	55	401.22704281031383	800.4395326874277	2	401.22686767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TAGGKGTPL_	ENSG00000165699|ENST00000298552|TSC1;ENST00000493467.5_1_9:135785858-135804259:-|nuORF;nc|ENSG00000165699|Q92574-2|TSC1;TSC1|p.L463*|1|0.4|ENSG00000165699|chr9:132906781-132906781|A/-|frameshift_variant;TSC1|p.L910Wfs*21|1|0.36|ENSG00000165699|chr9:132897507-132897507|A/-|frameshift_variant	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	2542	2571	5111
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5116	17.617	NaN	4592.7	30	0	2205.5	0.106	+			23428	LADAIILLTE	10	29	357.8806682663727	1070.6201753993182	3	357.8806457519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LADAIILLTE_	ENSG00000103326|ENST00000219611|CAPN15;ENST00000565010.1_1_16:602435-603513:+|nuORF	23.52269567125451	0.6877354443478558	6				NaN	NaN	0	NaN	2543	2571	5111
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5117	17.619	NaN	5045.4	30	0	2330.4	0.035			+	36803	SIDQPRPSF	9	55	523.7668783049711	1045.519203676742	2	523.7671508789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SIDQPRPSF_	REV__ENST00000509973.5_1_4:84026116-84035878:-|nuORF;REV__ENST00000515389.5_1_4:84015842-84035875:-|nuORF	42.396135135203025	0.392153681582562	6				NaN	NaN	0	NaN	2544	2571	5111
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5118	17.62	NaN	2258.7	30	0	274.99	0.139			+	30582	QAPALQVG	8	49	392.2216594702823	782.4287660073646	2	392.2216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QAPALQVG_	REV__nc|ENSG00000290942|Q86YQ2|BPIFA4P	25.450171626174864	0.7628259754767981	6				NaN	NaN	0	NaN	2545	2571	5111
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5136	17.659	NaN	50046	30	0	12730	0.214	+			1426	AEYAANTTK	9	82	484.7394095399101	NaN	0	484.7393798828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEYAANTTK_	ENST00000482597.5_2_1:202152523-202152759:+|nuORF	98.62937762414208	0.024200618960070384	6				NaN	NaN	0	NaN	2560	2574	5135
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5137	17.663	NaN	4038.1	30	0	635.46	0.106	+			22340	KTGEVLDTK	9	58	495.7772344803464	989.5399160274928	2	495.77679443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTGEVLDTK_	ENSG00000196937|ENST00000359943|FAM3C	79.48907831485694	0.09975780661107167	6				NaN	NaN	0	NaN	2561	2574	5135
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5138	17.665	NaN	9529	30	0	1251.4	0.106	+			34458	RTYSGPMNK	9	70	527.2612256269855	1052.507898320771	2	527.261962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RTYSGPMNK_	ENSG00000124429|ENST00000262753|POF1B;nc|ENSG00000124429|Q8WVV4-1|POF1B;nc|ENSG00000124429|Q8WVV4-3|POF1B;POF1B|p.T130Lfs*12|1|0.14|ENSG00000124429|chrX:85359600-85359601|-/AG|frameshift_variant	104.42354056486148	0.0346881550498418	6				NaN	NaN	0	NaN	2562	2574	5135
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5139	17.667	NaN	14544	30	0	1864.5	0.106			+	42083	SYFLAVWMHL	10	58	422.8838847847198	NaN	0	422.5498046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SYFLAVWMHL_	REV__ENSG00000108021|ENST00000695737|TASOR2	36.446750945000026	0.3805027428805705	6				NaN	NaN	0	NaN	2563	2574	5135
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5140	17.668	NaN	5048.5	30	0	1018.7	0.106	+			5523	AVAHALTEK	9	57	470.26662570018993	938.5186984671799	2	470.26629638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVAHALTEK_	ENSG00000163468|ENST00000295688|CCT3;nc|ENSG00000163468|P49368-2|CCT3	131.03138772384656	0.014687601201650916	6				NaN	NaN	0	NaN	2564	2574	5135
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5141	17.67	NaN	7804.5	30	0	2524.9	0.037	+			17222	HVIRVLRQS	9	49	369.8963790498736	1106.6673077498208	3	369.896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HVIRVLRQS_	ENST00000367184.2_1_1:204435983-204436325:-|nuORF	37.15910966729921	0.4535818937225704	6				NaN	NaN	0	NaN	2565	2574	5135
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5142	17.671	NaN	7169.6	30	0	2187.4	0.139	+			6324	AVTDQTVSK	9	64	474.75330753093016	947.4920621286603	2	474.7533874511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AVTDQTVSK_	COIL|p.N162Tfs*47|1|0.22|ENSG00000121058|chr17:56950757-56950757|T/-|frameshift_variant;ENSG00000121058|ENST00000240316|COIL	101.45984612302182	0.0377122763612125	6				NaN	NaN	0	NaN	2566	2574	5135
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5160	17.71	NaN	17171	30	0	5214.4	0.214	+			49183	VVMRDPNTK	9	65	530.2838775798105	1058.5532022264208	2	530.2850341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVMRDPNTK_	chr12:54282662-54282800|482|460.96|0.0|25.46|+|ENST00000677249|HNRNPA1,HNRNPA1;ENSG00000135486|ENST00000340913|HNRNPA1;ENSG00000139675|ENST00000357495|HNRNPA1L2;ENSG00000224578|ENST00000565308|HNRNPA1L3;ENST00000441603.1_1_11:5593122-5593311:-|nuORF;ENST00000452488.1_1_2:41383770-41384067:+|nuORF;ENST00000457695.2_1_X:100110922-100111255:-|nuORF;ENST00000575692.1_1_17:2210089-2210875:+|nuORF;nc|ENSG00000135486|P09651-2|HNRNPA1;nc|ENSG00000135486|P09651-3|HNRNPA1	136.98908636845044	0.011892605960677736	6				NaN	NaN	0	NaN	2581	2577	5159
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5161	17.714	NaN	3547.8	30	0	516.2	0.106	+			38458	SSAQVSTVGQ	10	65	482.24074377674583	962.4669346202917	2	482.2406311035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSAQVSTVGQ_	ENSG00000100354|ENST00000454349|TNRC6B;nc|ENSG00000100354|Q9UPQ9-1|TNRC6B;TNRC6B|p.A1354Tfs*46|1|0.47|ENSG00000100354|chr22:40301265-40301266|-/ACCCAAC|frameshift_variant;TNRC6B|p.E751Rfs*41|1|0.08|ENSG00000100354|chr22:40266476-40266476|G/-|frameshift_variant;TNRC6B|p.E999Rfs*48|1|0.29|ENSG00000100354|chr22:40273449-40273449|G/-|frameshift_variant;TNRC6B|p.G1342Wfs*56|1|0.32|ENSG00000100354|chr22:40301234-40301235|-/T|frameshift_variant;TNRC6B|p.L546Sfs*63|1|0.35|ENSG00000100354|chr22:40265862-40265862|C/-|frameshift_variant;TNRC6B|p.N758Tfs*34|1|0.18|ENSG00000100354|chr22:40266498-40266498|A/-|frameshift_variant;TNRC6B|p.Y593Tfs*16|1|0.8|ENSG00000100354|chr22:40266006-40266006|G/-|frameshift_variant	81.52500206392136	0.18316182710238588	6				NaN	NaN	0	NaN	2582	2577	5159
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5162	17.716	NaN	2487.1	30	0	572.42	0.106			+	30722	QDILKDPTR	9	57	543.3015215170773	1084.5884901009545	2	543.3017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QDILKDPTR_	REV__ENSG00000047578|ENST00000261588|KATNIP	58.22992032128504	0.22837015374068087	6				NaN	NaN	0	NaN	2583	2577	5159
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5163	17.718	NaN	8575.8	30	0	2506.5	0.106	+			41870	SVTGVTASK	9	68	425.2374440004068	848.4603350676136	2	425.23699951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVTGVTASK_	ENSG00000153046|ENST00000397588|CDYL;ENST00000472453.5_1_6:4776866-4954287:+|nuORF;nc|ENSG00000153046|Q9Y232-3|CDYL;nc|ENSG00000153046|Q9Y232-4|CDYL;nc|ENSG00000153046|Q9Y232|CDYL	74.1650062923329	0.12277912660386392	6				NaN	NaN	0	NaN	2584	2577	5159
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5164	17.72	NaN	12873	30	0	6485.5	0.106			+	-1	GVGAMGTVARV	11	48	353.8584639366462	1058.5535624101387	3	353.8586120605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))GVGAMGTVARV_	REV__ARSD|p.A227V|1|0.61|ENSG00000006756|chrX:2917987-2917987|G/A|missense_variant	35.17822180527639	0.6208003396870814	6				NaN	NaN	0	NaN	2585	2577	5159
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5165	17.721	NaN	149490	30	0	42136	0.038	+			22111	KSNISVFTPPD	11	113	402.21228755246455	1203.6150332575937	3	402.2121276855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KSNISVFTPPD_	ENSG00000139304|ENST00000644991|PTPRQ;nc|ENSG00000139304|Q9UMZ3|PTPRQ;PTPRQ|p.K1365Rfs*5|1|0.42|ENSG00000139304|chr12:80549539-80549539|A/-|frameshift_variant;PTPRQ|p.N2031Kfs*10|1|0.46|ENSG00000139304|chr12:80652805-80652806|-/A|frameshift_variant;PTPRQ|p.Q1869Afs*5|1|0.38|ENSG00000139304|chr12:80620361-80620362|-/A|frameshift_variant;PTPRQ|p.Q791Kfs*18|1|0.3|ENSG00000139304|chr12:80506122-80506122|C/-|frameshift_variant;PTPRQ|p.Y1402Lfs*5|1|0.3|ENSG00000139304|chr12:80549654-80549654|A/-|frameshift_variant	53.59686742100583	0.38061189074210516	6				NaN	NaN	0	NaN	2586	2577	5159
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5166	17.722	NaN	6046.4	30	0	1510.8	0.143				-1	REDPIIAMVL	10	52	391.5510289773065	1171.6312575321194	3	391.55035400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_REDPIIAM(Oxidation (M))VL_	ENSG00000163564|ENST00000368140|PYHIN1;ENST00000485134.1_1_1:158911778-158914889:+|nuORF;nc|ENSG00000163564|Q6K0P9-2|PYHIN1;nc|ENSG00000163564|Q6K0P9-3|PYHIN1;nc|ENSG00000163564|Q6K0P9-4|PYHIN1	27.047317107675042	0.6589519614906109	6				NaN	NaN	0	NaN	2587	2577	5159
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5184	17.761	NaN	37886	30	0	5050.1	0.214				-1	NPSFDGCWELI	11	83	446.5323284447446	1336.575155934434	3	446.5321350097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_NPSFDGC(Carbamidomethyl (C))WELI_	DNAH3|p.E3315Dfs*37|1|0.1|ENSG00000158486|chr16:20963939-20963940|-/A|frameshift_variant;DNAH3|p.G2194Efs*14|1|0.34|ENSG00000158486|chr16:20997303-20997303|C/-|frameshift_variant;DNAH3|p.I2375Sfs*8|1|0.13|ENSG00000158486|chr16:20985619-20985619|T/-|frameshift_variant;DNAH3|p.V2829Yfs*9|1|0.43|ENSG00000158486|chr16:20965399-20965399|C/-|frameshift_variant;ENSG00000158486|ENST00000698260|DNAH3;nc|ENSG00000158486|Q8TD57-2|DNAH3;nc|ENSG00000158486|Q8TD57-3|DNAH3;nc|ENSG00000158486|Q8TD57|DNAH3	43.650786325866115	0.5079891456189096	6				NaN	NaN	0	NaN	2602	2580	5183
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5185	17.764	NaN	17313	30	0	2999.8	0.106	+			22114	KSNLPPRPMM	10	64	396.2085867015397	1185.603930704819	3	396.2087097167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_KSNLPPRPM(Oxidation (M))M_	ENST00000374601.7_1_1:23730426-23730582:-|nuORF	56.43379154798735	0.3982744522255666	6				NaN	NaN	0	NaN	2603	2580	5183
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5186	17.766	NaN	1722.8	30	0	166.39	0.106	+			40344	STTHLMTGK	9	50	488.24993896484375	NaN	0	488.24993896484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STTHLMTGK_	ENSG00000138688|ENST00000679879|BLTP1;nc|ENSG00000138688|Q2LD37-4|BLTP1;nc|ENSG00000138688|Q2LD37-7|BLTP1;nc|ENSG00000138688|Q2LD37|BLTP1	36.446750945000026	0.29355505452396785	6				NaN	NaN	0	NaN	2604	2580	5183
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5187	17.768	NaN	3356.1	30	0	767.27	0.106	+			4056	ATDGTFSSK	9	57	457.21633224390115	NaN	0	457.2164306640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATDGTFSSK_	ENSG00000083857|ENST00000441802|FAT1;FAT1|p.N3847Yfs*7|1|0.03|ENSG00000083857|chr4:186601370-186601371|-/TTATA|frameshift_variant;FAT1|p.P3228Lfs*42|1|0.27|ENSG00000083857|chr4:186611556-186611556|G/-|frameshift_variant;FAT1|p.P4313Lfs*36|1|0.34|ENSG00000083857|chr4:186596602-186596602|G/-|frameshift_variant	74.25504064058377	0.09106938647426577	6				NaN	NaN	0	NaN	2605	2580	5183
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5188	17.77	NaN	1889.8	30	0	213.4	0.106	+			31922	QQLSFRLSP	9	67	538.3004150390625	NaN	0	538.3004150390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QQLSFRLSP_	CDH12|p.F524L|1|0.2|ENSG00000154162|chr5:21760619-21760619|G/T|missense_variant	59.93077597824379	0.14961415694175798	6				NaN	NaN	0	NaN	2606	2580	5183
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5189	17.772	NaN	5059.4	30	0	1882.6	0.035	+			29535	PEGLLFVSAG	10	62	495.2698312340412	988.5251095348824	2	495.2691650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PEGLLFVSAG_	ENST00000503240.5_1_5:148743537-148748214:+|nuORF;ENST00000507621.1_1_5:148743537-148743774:+|nuORF	35.61828744233558	0.588957954432594	6				NaN	NaN	0	NaN	2607	2580	5183
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5190	17.772	NaN	2264.4	30	0	432.33	0.138			+	12249	GATHFPNK	8	58	436.2262268066406	NaN	0	436.2262268066406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GATHFPNK_	REV__CFAP47|p.H2345Afs*15|1|0.09|ENSG00000165164|chrX:36236809-36236810|-/A|frameshift_variant;REV__CFAP47|p.P2326Tfs*34|1|0.26|ENSG00000165164|chrX:36236751-36236752|-/A|frameshift_variant;REV__ENSG00000165164|ENST00000378653|CFAP47	33.51558372728122	1.7418937515398478	6				NaN	NaN	0	NaN	2608	2580	5183
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5208	17.811	NaN	41447	30	0	14151	0.214	+			23153	KVYDKAINR	9	87	369.54866861046463	1105.624176431594	3	369.548583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVYDKAINR_	ENSG00000164190|ENST00000282516|NIPBL;ENST00000514335.1_1_5:37051847-37064632:+|nuORF;nc|ENSG00000164190|Q6KC79-2|NIPBL;NIPBL|p.I2776Lfs*3|1|0.17|ENSG00000164190|chr5:37064797-37064797|A/-|frameshift_variant	61.691277971877994	0.19951612995419254	6				NaN	NaN	0	NaN	2623	2583	5207
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5209	17.814	NaN	6514	30	0	1663.1	0.106				-1	 	0	39	361.22075962846736	720.4269663237347	2	361.2206726074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2624	2583	5207
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5210	17.816	NaN	16288	30	0	3643.6	0.106	+			22590	KTSTVPPSLRK	11	60	405.24706249545085	1212.7193580865526	3	405.2467041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KTSTVPPSLRK_	ENSG00000213676|ENST00000375203|ATF6B;nc|ENSG00000213676|Q99941-2|ATF6B	73.90049950687481	0.20322248490973555	6				NaN	NaN	0	NaN	2625	2583	5207
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5211	17.818	NaN	16884	30	0	6411.4	0.106	+			6464	AVYGQNDIHHK	11	63	427.8826614764508	1280.6261550295524	3	427.88250732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVYGQNDIHHK_	ENSG00000138757|ENST00000359707|G3BP2;nc|ENSG00000138757|Q9UN86-2|G3BP2	33.03940026070387	0.6432348334061824	6				NaN	NaN	0	NaN	2626	2583	5207
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5212	17.82	NaN	8514.9	30	0	2322	0.106			+	-1	AGTCSPLR	8	56	431.2159421371558	860.4173313411117	2	431.2157287597656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_AGTC(Carbamidomethyl (C))SPLR_	REV__ENST00000452859.6_1_17:46184937-46190729:+|nuORF	71.37791200682192	0.3954169775488141	6				NaN	NaN	0	NaN	2627	2583	5207
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5213	17.822	NaN	8279.8	30	0	2456.6	0.034	+			47250	VMRDPNTK	8	62	480.7499925322421	959.4854321312843	2	480.74969482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VMRDPNTK_	chr12:54281896-54283827|481|161.31|0.0|23.94|+|ENST00000679273|HNRNPA1,HNRNPA1;chr12:54281908-54283827|478|50.47|0.0|22.27|+|ENST00000678448|HNRNPA1,HNRNPA1;chr12:54281941-54282052|473|46.5|0.0|22.15|+|ENST00000676842|HNRNPA1,HNRNPA1;chr12:54281945-54282090|465|21.34|0.0|21.03|+|ENST00000550994|HNRNPA1,HNRNPA1;chr12:54282662-54282800|482|460.96|0.0|25.46|+|ENST00000677249|HNRNPA1,HNRNPA1;ENSG00000135486|ENST00000340913|HNRNPA1;ENSG00000139675|ENST00000357495|HNRNPA1L2;ENSG00000224578|ENST00000565308|HNRNPA1L3;ENST00000391992.3_1_12:9181361-9181625:-|nuORF;ENST00000412087.2_1_X:100143133-100143544:-|nuORF;ENST00000441603.1_1_11:5593122-5593311:-|nuORF;ENST00000452488.1_1_2:41383770-41384067:+|nuORF;ENST00000457695.2_1_X:100110922-100111255:-|nuORF;ENST00000575692.1_1_17:2210089-2210875:+|nuORF;nc|ENSG00000135486|P09651-2|HNRNPA1;nc|ENSG00000135486|P09651-3|HNRNPA1	98.62937762414208	0.25143494708580966	6				NaN	NaN	0	NaN	2628	2583	5207
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5214	17.822	NaN	2971.1	30	0	592.02	0.144	+			50097	WGQHHVSVGGL	11	53	392.86859514654526	1175.5839560398358	3	392.8683166503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_WGQHHVSVGGL_	ENSG00000111885|ENST00000368468|MAN1A1	19.262678746197807	0.7802940895261122	6				NaN	NaN	0	NaN	2629	2583	5207
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5232	17.86	NaN	33800	30	0	3819.9	0.214	+			43093	TENPHGARL	9	100	497.75665283203125	NaN	0	497.75665283203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TENPHGARL_	ENSG00000243725|ENST00000371281|TTC4	95.81516180277367	0.029873745472008544	6				NaN	NaN	0	NaN	2644	2586	5231
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5233	17.864	NaN	48697	30	0	21745	0.106	+			14619	GTGKTLIGK	9	79	437.77141502610425	873.5282771190085	2	437.7712097167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTGKTLIGK_	ENSG00000132436|ENST00000433017|FIGNL1;FIGNL1|p.C453R|1|0.23|ENSG00000132436|chr7:50445931-50445931|A/G|missense_variant;nc|ENSG00000132436|Q6PIW4-2|FIGNL1	126.24258497203832	0.01742065577488747	6				NaN	NaN	0	NaN	2645	2586	5231
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5234	17.866	NaN	19773	30	0	2355.8	0.106	+			12744	GELAKHAV	8	76	412.73496794378906	823.4553829543781	2	412.7347106933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GELAKHAV_	ENSG00000124635|ENST00000339812|H2BC11;ENSG00000146047|ENST00000274764|H2BC1;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000196890|ENST00000693095|H2BC26;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000369385.5_1_1:149814898-149814982:+|nuORF;ENST00000436555.1_1_1:228651916-228652012:-|nuORF;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;HIST1H2BJ|p.E114K|1|0.21|ENSG00000124635|chr6:27132411-27132411|C/T|missense_variant;HIST1H2BK|p.E114D|1|0.39|ENSG00000197903|chr6:27146457-27146457|C/G|missense_variant;nc|ENSG00000203814|Q5QNW6-2|H2BC18;nc|ENSG00000285480|A0A2R8Y619|H2BK1	79.45101966838831	0.3281480470254892	6				NaN	NaN	0	NaN	2646	2586	5231
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5235	17.868	NaN	7343.5	30	0	897.07	0.106	+			34324	RTNEVVAIKK	10	67	386.5717255617702	1156.6933472855108	3	386.571533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RTNEVVAIKK_	ENSG00000160551|ENST00000261716|TAOK1;nc|ENSG00000160551|Q7L7X3-3|TAOK1;TAOK1-VMP1|1|fusion	58.2462437865262	0.38179041844353556	6				NaN	NaN	0	NaN	2647	2586	5231
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5236	17.869	NaN	11746	30	0	2860	0.106	+			40020	STMSTSCAR	9	59	472.20181419729226	942.3890754613846	2	472.201904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STMSTSCAR_	ENST00000282388.3_2_2:43452860-43453537:-|nuORF	118.74307786436346	0.02196067127630568	6				NaN	NaN	0	NaN	2648	2586	5231
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5237	17.871	NaN	2247	30	0	497.35	0.037	+			34325	RTNEVVAIKK	10	49	579.3540738691089	1156.6935948050177	2	579.3541259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RTNEVVAIKK_	ENSG00000160551|ENST00000261716|TAOK1;nc|ENSG00000160551|Q7L7X3-3|TAOK1;TAOK1-VMP1|1|fusion	51.52775601994872	0.4429225830406686	6				NaN	NaN	0	NaN	2649	2586	5231
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5238	17.872	NaN	16300	30	0	4993.6	0.14	+			22311	KTETPIVSK	9	76	501.7951294957598	1001.5757060583196	2	501.79498291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KTETPIVSK_	ENSG00000124164|ENST00000475243|VAPB;ENST00000463370.5_1_20:57007450-57019288:+|nuORF;ENST00000476395.1_1_20:57015848-57019288:+|nuORF	157.3448221729694	0.005157168637584854	6				NaN	NaN	0	NaN	2650	2586	5231
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5256	17.908	NaN	87222	30	0	7075.2	0.214	+			6862	CKSNWRGGWDW	11	91	465.53945929435287	1393.5965484832586	3	465.5392761230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CKSNWRGGWDW_	ENSG00000183560|ENST00000687084|IZUMO1R;nc|ENSG00000183560|A6ND01-2|IZUMO1R	63.53385203322761	0.2919106290768168	6				NaN	NaN	0	NaN	2665	2589	5255
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5257	17.912	NaN	13025	30	0	5928.8	0.106	+			14233	GSSSASIVK	9	57	418.22950282174764	834.4444527102953	2	418.2294616699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSSSASIVK_	DSG2|p.I845*|1|0.27|ENSG00000046604|chr18:31545914-31545914|A/-|frameshift_variant;ENSG00000046604|ENST00000261590|DSG2	47.95952297671804	0.32689736945648856	6				NaN	NaN	0	NaN	2666	2589	5255
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5258	17.914	NaN	14945	30	0	7851	0.106			+	34057	RSMKMWRA	8	62	541.273622404362	1080.5326918755238	2	541.2739868164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_RSM(Oxidation (M))KMWRA_	REV__ENST00000265109.7_1_5:34829894-34830826:+|nuORF	51.33545320467046	0.5859736979383976	6				NaN	NaN	0	NaN	2667	2589	5255
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5259	17.916	NaN	15451	30	0	4593.3	0.106	+			22586	KTSTVFSSK	9	82	492.7719121158235	983.529271298447	2	492.77130126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTSTVFSSK_	nc|ENSG00000196275|Q86UP8-4|GTF2IRD2	102.0615471778698	0.03709830720253279	6				NaN	NaN	0	NaN	2668	2589	5255
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5260	17.917	NaN	8105	30	0	2009.8	0.106				-1	NKDHGCSHICK	11	54	678.3002441786495	1354.5859354240988	2	678.3003540039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C)	_NKDHGC(Carbamidomethyl (C))SHIC(Carbamidomethyl (C))K_	ENSG00000175356|ENST00000649792|SCUBE2;nc|ENSG00000175356|Q9NQ36-2|SCUBE2;nc|ENSG00000175356|Q9NQ36-3|SCUBE2;nc|ENSG00000175356|Q9NQ36|SCUBE2;SCUBE2|p.N754Kfs*2|1|0.22|ENSG00000175356|chr11:9029954-9029955|-/T|frameshift_variant	36.446750945000026	0.6065623449959539	6				NaN	NaN	0	NaN	2669	2589	5255
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5261	17.919	NaN	7791.5	30	0	870.22	0.038	+			33085	REKRKQLTL	9	55	391.24725787008947	1170.7199442104684	3	391.2472839355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_REKRKQLTL_	ENSG00000121068|ENST00000240328|TBX2;ENSG00000135111|ENST00000349155|TBX3;ENST00000477081.1_1_17:59477759-59482423:+|nuORF;nc|ENSG00000135111|O15119-3|TBX3;nc|ENSG00000135111|O15119|TBX3;TBX3|p.K714Rfs*15|1|0.12|ENSG00000135111|chr12:114671931-114671932|TT/-|frameshift_variant;TBX3|p.S443Afs*194|1|1.0|ENSG00000135111|chr12:114674609-114674610|-/ATGGTGGCGGGGCT|frameshift_variant	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	2670	2589	5255
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5262	17.92	NaN	3566.4	30	0	795.21	0.14	+			44600	TTDKETVLK	9	59	517.78986660302	1033.5651802728398	2	517.7904663085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TTDKETVLK_	ENSG00000176148|ENST00000334274|TCP11L1	56.43379154798735	0.2433427591689151	6				NaN	NaN	0	NaN	2671	2589	5255
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5280	17.957	NaN	421500	30	0	106410	0.15	+			19423	KAPSAARSL	9	105	450.76632380281717	NaN	0	450.7663879394531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAPSAARSL_	ENSG00000083937|ENST00000263780|CHMP2B;ENST00000466696.1_1_3:87302513-87302969:+|nuORF;nc|ENSG00000083937|Q9UQN3-2|CHMP2B	78.26377905018397	0.07733306720594871	6				NaN	NaN	0	NaN	2686	2592	5279
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5281	17.959	NaN	62115	30	0	22327	0.106			+	14945	GTMHVPESAPK	11	67	385.1951067896392	1152.5634909691178	3	385.1949768066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTMHVPESAPK_	REV__ENSG00000136932|ENST00000375119|TRMO	43.650786325866115	0.5079891456189096	6				NaN	NaN	0	NaN	2687	2592	5279
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5282	17.961	NaN	5359.9	30	0	1298	0.106			+	44168	TQRQPDFT	8	59	496.7436591227218	991.4727653122436	2	496.7433776855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TQRQPDFT_	REV__ENSG00000149428|ENST00000617285|HYOU1;REV__ENST00000531694.5_1_11:118924831-118926006:-|nuORF;REV__ENST00000533381.5_1_11:118925895-118927580:-|nuORF;REV__ENST00000543287.5_1_11:118919950-118926831:-|nuORF;REV__HYOU1|p.K651Rfs*46|1|0.13|ENSG00000149428|chr11:119049058-119049058|T/-|frameshift_variant;REV__nc|ENSG00000149428|Q9Y4L1-2|HYOU1	55.50420428727701	0.5462892107279674	6				NaN	NaN	0	NaN	2688	2592	5279
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5283	17.963	NaN	6878.7	30	0	3333.5	0.106			+	48814	VVAGTSELPR	10	42	343.52935908938025	1027.5662478683407	3	343.5292663574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVAGTSELPR_	REV__ENSG00000034971|ENST00000037502|MYOC	26.69291269510374	0.6618461711292317	6				NaN	NaN	0	NaN	2689	2592	5279
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5284	17.965	NaN	15780	30	0	4150.6	0.106	+			40305	STSSSSPLR	9	64	461.23533043379587	920.4561079343918	2	461.2352294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STSSSSPLR_	ENST00000223023.4_1_7:123388889-123389093:-|nuORF	136.26810882979174	0.012230845423532208	6				NaN	NaN	0	NaN	2690	2592	5279
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5285	17.967	NaN	2044.4	30	0	308.93	0.106				-1	ANLKSCCVPTR	11	76	624.8131939432059	1247.6118349532117	2	624.8134155273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_ANLKSCC(Carbamidomethyl (C))VPTR_	INHBA|p.K395R|1|0.34|ENSG00000122641|chr7:41689747-41689747|T/C|missense_variant	38.753607047826485	0.5749975102143227	6				NaN	NaN	0	NaN	2691	2592	5279
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5286	17.969	NaN	3595.6	30	0	1319.5	0.035	+			17155	HTDKGSFLK	9	65	516.777658598825	1031.54076426445	2	516.7777099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HTDKGSFLK_	ATAD5|p.F1193Lfs*6|2|0.35|ENSG00000176208|chr17:30869612-30869612|T/-|frameshift_variant;ATAD5|p.K671Nfs*36|1|0.37|ENSG00000176208|chr17:30837246-30837246|A/-|frameshift_variant;ATAD5|p.S1470Ffs*4|1|0.42|ENSG00000176208|chr17:30892750-30892751|-/T|frameshift_variant;ATAD5|p.S1470Pfs*10|1|0.29|ENSG00000176208|chr17:30892751-30892751|T/-|frameshift_variant;ENSG00000176208|ENST00000321990|ATAD5;ENST00000585133.1_1_17:29162236-29196669:+|nuORF;nc|ENSG00000176208|Q96QE3-2|ATAD5	70.8162118820467	0.13725933411854815	6				NaN	NaN	0	NaN	2692	2592	5279
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5304	18.003	NaN	65055	30	0	13306	0.214	+			48905	VVDNGSGMCK	10	103	533.7360535387382	1065.4575541442764	2	533.7366333007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_VVDNGSGMC(Carbamidomethyl (C))K_	ACTBL2|p.R29Gfs*7|1|0.37|ENSG00000169067|chr5:57482623-57482623|G/-|frameshift_variant;ENSG00000075624|ENST00000646664|ACTB;ENSG00000169067|ENST00000423391|ACTBL2;ENST00000418351.1_1_15:44282253-44282364:-|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000477812.1_1_7:5569027-5569288:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF	104.42354056486148	0.06456012287859861	6				NaN	NaN	0	NaN	2707	2595	5303
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5305	18.007	NaN	17573	30	0	1751.3	0.106			+	32858	RDAKAIEK	8	81	465.7719220246523	929.5292911161047	2	465.7717590332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RDAKAIEK_	REV__HDC|p.G431D|1|0.09|ENSG00000140287|chr15:50242957-50242957|C/T|missense_variant	68.78682469695295	0.41700713582915416	6				NaN	NaN	0	NaN	2708	2595	5303
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5306	18.009	NaN	3169.6	30	0	711.65	0.106				-1	 	0	43	352.2154506124552	702.4163482917104	2	352.21539306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2709	2595	5303
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5307	18.011	NaN	2872.8	30	0	446.61	0.106			+	28600	NKPLLIRR	8	43	337.22468051477335	NaN	0	336.8902587890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NKPLLIRR_	REV__ENSG00000188906|ENST00000298910|LRRK2;REV__ENST00000479187.5_1_12:40692272-40758932:+|nuORF;REV__LRRK2|p.N2261Kfs*9|1|0.28|ENSG00000188906|chr12:40356119-40356120|-/A|frameshift_variant;REV__LRRK2|p.V2150I|1|0.35|ENSG00000188906|chr12:40351605-40351605|G/A|missense_variant	17.364965105453717	1.7418937515398478	6				NaN	NaN	0	NaN	2710	2595	5303
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5308	18.012	NaN	17722	30	0	4201.8	0.106			+	6876	CLIFLRVEGQ	10	73	393.21686654284355	1176.6287702287307	3	393.21673583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_CLIFLRVEGQ_	REV__ENST00000525598.1_1_11:118984241-118984860:+|nuORF	41.42661286455405	0.5359995577334734	6				NaN	NaN	0	NaN	2711	2595	5303
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5309	18.014	NaN	5108.9	30	0	457.15	0.035			+	-1	CFHHVPLK	8	65	519.2729846308794	1036.5314163285586	2	519.2724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_C(Carbamidomethyl (C))FHHVPLK_	REV__ENSG00000166750|ENST00000299977|SLFN5;REV__ENSG00000205045|ENST00000628453|SLFN12L;REV__nc|ENSG00000166750|Q08AF3-2|SLFN5;REV__nc|ENSG00000205045|Q6IEE8-2|SLFN12L;REV__nc|ENSG00000205045|Q6IEE8|SLFN12L;REV__SLFN5|p.P698Lfs*21|1|0.46|ENSG00000166750|chr17:35265300-35265300|C/-|frameshift_variant;REV__SLFN5|p.Q524Sfs*11|1|0.73|ENSG00000166750|chr17:35264609-35264609|C/-|frameshift_variant	46.76643321282427	0.6143254112625767	6				NaN	NaN	0	NaN	2712	2595	5303
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5310	18.015	NaN	10174	30	0	2314.4	0.144	+			32757	RAQDLPLKK	9	48	356.88810538900475	1067.6424867672142	3	356.8888854980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RAQDLPLKK_	ENSG00000139641|ENST00000394048|ESYT1	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	2713	2595	5303
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5328	18.054	NaN	37240	30	0	11575	0.214	+			5430	ATYINKSLS	9	58	332.8500902400959	995.5284413204877	3	332.8501281738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATYINKSLS_	ENSG00000088727|ENST00000684063|KIF9;ENST00000487440.5_1_3:47281337-47324087:-|nuORF;nc|ENSG00000088727|Q9HAQ2-2|KIF9	49.536043120802724	0.308405419312776	6				NaN	NaN	0	NaN	2728	2598	5327
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5329	18.057	NaN	47014	30	0	21220	0.106	+			39283	STARLWDHKK	10	89	414.56318575182456	1240.6677278556738	3	414.56304931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STARLWDHKK_	ENST00000529974.1_1_11:88068229-88070878:-|nuORF	63.42647028704847	0.33467688528802414	6				NaN	NaN	0	NaN	2729	2598	5327
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5330	18.059	NaN	16609	30	0	6415.1	0.09	+			4280	ATGGMANVK	9	68	424.7185745176822	847.4225961021644	2	424.7181091308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATGGMANVK_	ENSG00000136936|ENST00000375128|XPA;XPA|p.A65T|1|0.24|ENSG00000136936|chr9:97693739-97693739|C/T|missense_variant	132.757866228626	0.013877640931359021	6				NaN	NaN	0	NaN	2730	2598	5327
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5331	18.061	NaN	18546	30	0	2413.2	0.106			+	19449	KARELNPIK	9	78	534.8300538732116	1067.645554813223	2	534.8304443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KARELNPIK_	REV__ENSG00000066135|ENST00000372396|KDM4A;REV__nc|ENSG00000066135|O75164-2|KDM4A	87.69643885390035	0.07135982304947239	6				NaN	NaN	0	NaN	2731	2598	5327
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5332	18.063	NaN	1875.5	30	0	191.6	0.106	+			22107	KSNEGSLLI	9	58	480.77154023717316	959.5285275411463	2	480.7712707519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KSNEGSLLI_	nc|ENSG00000168000|Q96G97-3|BSCL2	35.61828744233558	0.47037581924408073	6				NaN	NaN	0	NaN	2732	2598	5327
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5333	18.064	NaN	6907.6	30	0	864.68	0.106	+			4138	ATEQEDAAVAK	11	74	566.777352191653	1131.540151450106	2	566.77783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATEQEDAAVAK_	ENSG00000125844|ENST00000377813|RRBP1;nc|ENSG00000125844|Q9P2E9-3|RRBP1;RRBP1|p.A628Gfs*69|1|0.35|ENSG00000125844|chr20:17621915-17621916|-/T|frameshift_variant	136.48854661914896	0.0007874190838222282	6				NaN	NaN	0	NaN	2733	2598	5327
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5334	18.066	NaN	2210.3	30	0	330.1	0.035	+			20883	KIQESTQPG	9	59	494.2587305947735	NaN	0	494.2586975097656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KIQESTQPG_	PCDHB5|p.P143Q|1|0.17|ENSG00000113209|chr5:141135862-141135862|C/A|missense_variant	40.77816245573522	0.2702456086868081	6				NaN	NaN	0	NaN	2734	2598	5327
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5352	18.102	NaN	19540	30	0	8230.5	0.214	+			22283	KTDEKALK	8	70	466.7741134608176	931.5336739884352	2	466.7737121582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTDEKALK_	ENSG00000175718|ENST00000424776|RBMXL3;RBMXL3|p.G100Afs*176|1|0.32|ENSG00000175718|chrX:115189734-115189734|C/-|frameshift_variant;RBMXL3|p.G265Afs*11|1|0.38|ENSG00000175718|chrX:115190234-115190234|G/-|frameshift_variant;RBMXL3|p.G692Afs*282|1|0.46|ENSG00000175718|chrX:115191512-115191512|G/-|frameshift_variant	96.19043198914106	0.25873003980794995	6				NaN	NaN	0	NaN	2749	2601	5351
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5353	18.106	NaN	16612	30	0	7316.8	0.106	+			14248	GSSSVAAMK	9	62	419.21019061418997	836.40582829518	2	419.21014404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSSSVAAMK_	ENSG00000174021|ENST00000370645|GNG5;GNG5-NMI|1|fusion	110.11987700582712	0.028875675806141952	6				NaN	NaN	0	NaN	2750	2601	5351
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5354	18.108	NaN	15435	30	0	1902.6	0.106				-1	LEMLEYNHYQ	10	78	452.5358222649593	1354.5856373950778	3	452.5356750488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_LEM(Oxidation (M))LEYNHYQ_	nc|ENSG00000187098|O75030-10|MITF;nc|ENSG00000187098|O75030-11|MITF;nc|ENSG00000187098|O75030-9|MITF	38.753607047826485	0.5606299674732264	6				NaN	NaN	0	NaN	2751	2601	5351
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5355	18.109	NaN	4385.5	30	0	841.85	0.106	+			22490	KTNLTSVTK	9	66	496.292709361807	990.570865790414	2	496.29248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTNLTSVTK_	ENSG00000197386|ENST00000355072|HTT;ENST00000510626.5_1_4:3131970-3189635:+|nuORF;HTT|p.H2238Ffs*6|1|0.28|ENSG00000197386|chr4:3212643-3212644|CA/-|frameshift_variant;HTT|p.P2413Hfs*44|1|0.6|ENSG00000197386|chr4:3217944-3217944|C/-|frameshift_variant;HTT|p.R1412H|1|0.18|ENSG00000197386|chr4:3174789-3174789|G/A|missense_variant	81.52500206392136	0.09095445986635249	6				NaN	NaN	0	NaN	2752	2601	5351
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5356	18.111	NaN	13825	30	0	1784.2	0.106	+			40502	STYKEAFRK	9	65	377.2047110477333	NaN	0	377.2046813964844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STYKEAFRK_	ENSG00000163344|ENST00000368467|PMVK	49.536043120802724	0.20989033510253738	6				NaN	NaN	0	NaN	2753	2601	5351
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5357	18.113	NaN	4847.8	30	0	1415.7	0.036	+			48385	VTHQSVGVVK	10	60	527.3059930034862	1052.5974330737722	2	527.3062133789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTHQSVGVVK_	ENSG00000128731|ENST00000261609|HERC2;ENST00000529624.5_3_15:28916682-28918849:+|nuORF;ENST00000567869.1_1_15:28436080-28447805:-|nuORF	91.26522074875469	0.12383023862516404	6				NaN	NaN	0	NaN	2754	2601	5351
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5358	18.114	NaN	3002.4	30	0	437.45	0.145			+	44676	TTHPAVPIGQN	11	47	378.8691689677278	1133.5856775033833	3	378.869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TTHPAVPIGQN_	REV__ENSG00000173039|ENST00000406246|RELA;REV__ENST00000525693.5_1_11:65421851-65422496:-|nuORF;REV__ENST00000531484.5_1_11:65421851-65429483:-|nuORF;REV__nc|ENSG00000173039|Q04206-2|RELA;REV__nc|ENSG00000173039|Q04206-3|RELA;REV__nc|ENSG00000173039|Q04206-4|RELA;REV__RELA|p.D512Tfs*35|1|0.34|ENSG00000173039|chr11:65654501-65654501|G/-|frameshift_variant;REV__RELA|p.P521Rfs*26|1|0.42|ENSG00000173039|chr11:65654472-65654472|G/-|frameshift_variant	31.529811441608018	0.6590691889962369	6				NaN	NaN	0	NaN	2755	2601	5351
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5377	18.152	NaN	6563.4	30	0	1712.5	0.214			+	-1	ATMGIMAKLL	10	58	360.8646254369165	1079.5720469109497	3	360.8645324707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_ATM(Oxidation (M))GIM(Oxidation (M))AKLL_	REV__SLC25A11|p.V124M|1|0.34|ENSG00000108528|chr17:4938854-4938854|C/T|missense_variant	29.170058357718403	0.6416167986984785	6				NaN	NaN	0	NaN	2771	2604	5376
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5378	18.156	NaN	26634	30	0	8558.1	0.106	+			49195	VVMRDPQTK	9	72	537.291956464843	1072.569359996486	2	537.2926025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVMRDPQTK_	ENSG00000170144|ENST00000392524|HNRNPA3;ENST00000437410.2_1_1:54441353-54441674:-|nuORF;ENST00000472163.1_1_3:75263799-75264780:+|nuORF;HNRNPA3|p.K200Rfs*147|1|0.13|ENSG00000170144|chr2:177216544-177216544|A/-|frameshift_variant;HNRNPA3|p.Y267Lfs*2|1|0.62|ENSG00000170144|chr2:177216918-177216919|-/T|frameshift_variant;nc|ENSG00000170144|P51991-2|HNRNPA3	133.9934435666947	0.013297982075521412	6				NaN	NaN	0	NaN	2772	2604	5376
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5379	18.158	NaN	16250	30	0	2825.5	0.106	+			15888	GYSSKGLSQ	9	64	463.7325803432429	925.4506077532858	2	463.7322998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GYSSKGLSQ_	SLC44A4|p.I435S|1|0.34|ENSG00000204385|chr6:31866056-31866056|A/C|missense_variant	98.62937762414208	0.04060045538121712	6				NaN	NaN	0	NaN	2773	2604	5376
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5380	18.16	NaN	22238	30	0	8263.8	0.106	+			41514	SVPREPIDRK	10	56	399.5634707567893	1195.668582870568	3	399.5629577636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVPREPIDRK_	ENSG00000176946|ENST00000407315|THAP4	34.08650109265054	0.601467140718965	6				NaN	NaN	0	NaN	2774	2604	5376
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5381	18.161	NaN	114730	30	0	43126	0.106	+			4076	ATDKSFVEK	9	105	512.7695922535668	1023.5246315739336	2	512.787353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATDKSFVEK_	ENSG00000100345|ENST00000216181|MYH9;ENSG00000105357|ENST00000642316|MYH14;ENSG00000133392|ENST00000300036|MYH11;MYH14|p.L1950Sfs*14|1|0.34|ENSG00000105357|chr19:50309646-50309646|C/-|frameshift_variant;MYH14|p.M997*|1|0.19|ENSG00000105357|chr19:50271483-50271483|A/-|frameshift_variant;MYH14|p.R929Gfs*44|1|0.38|ENSG00000105357|chr19:50268237-50268237|G/-|frameshift_variant;MYH9|p.I784*|1|0.07|ENSG00000100345|chr22:36304036-36304036|G/-|frameshift_variant;nc|ENSG00000100345|P35579-2|MYH9;nc|ENSG00000105357|Q7Z406-4|MYH14;nc|ENSG00000105357|Q7Z406-5|MYH14;nc|ENSG00000105357|Q7Z406-6|MYH14;nc|ENSG00000105357|Q7Z406|MYH14;nc|ENSG00000133392|P35749-2|MYH11;nc|ENSG00000133392|P35749-3|MYH11;nc|ENSG00000133392|P35749-4|MYH11	157.3448221729694	0.005157168637584854	6				NaN	NaN	0	NaN	2775	2604	5376
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5382	18.163	NaN	18889	30	0	4296.5	0.037	+			3895	ATAQFKINKK	10	70	383.56460702153396	1147.671991664802	3	383.56427001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATAQFKINKK_	ENSG00000143228|ENST00000271452|NUF2;NUF2|p.I401Nfs*2|1|0.3|ENSG00000143228|chr1:163349015-163349016|-/A|frameshift_variant	63.42647028704847	0.33467688528802414	6				NaN	NaN	0	NaN	2776	2604	5376
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5383	18.164	NaN	10474	30	0	1837.5	0.138	+			18348	IQGQAVRK	8	65	450.2745294327721	898.5345059323442	2	450.2742919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IQGQAVRK_	ENSG00000099812|ENST00000215582|MISP	111.64827973302667	0.24425243057279236	6				NaN	NaN	0	NaN	2777	2604	5376
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5401	18.2	NaN	1260600	30	0	499690	0.112	+			4077	ATDKSFVEK	9	99	512.7695922535668	1023.5246315739336	2	512.7702026367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATDKSFVEK_	ENSG00000100345|ENST00000216181|MYH9;ENSG00000105357|ENST00000642316|MYH14;ENSG00000133392|ENST00000300036|MYH11;MYH14|p.L1950Sfs*14|1|0.34|ENSG00000105357|chr19:50309646-50309646|C/-|frameshift_variant;MYH14|p.M997*|1|0.19|ENSG00000105357|chr19:50271483-50271483|A/-|frameshift_variant;MYH14|p.R929Gfs*44|1|0.38|ENSG00000105357|chr19:50268237-50268237|G/-|frameshift_variant;MYH9|p.I784*|1|0.07|ENSG00000100345|chr22:36304036-36304036|G/-|frameshift_variant;nc|ENSG00000100345|P35579-2|MYH9;nc|ENSG00000105357|Q7Z406-4|MYH14;nc|ENSG00000105357|Q7Z406-5|MYH14;nc|ENSG00000105357|Q7Z406-6|MYH14;nc|ENSG00000105357|Q7Z406|MYH14;nc|ENSG00000133392|P35749-2|MYH11;nc|ENSG00000133392|P35749-3|MYH11;nc|ENSG00000133392|P35749-4|MYH11	169.6522961985778	0.0028262690464207238	6				NaN	NaN	0	NaN	2792	2607	5400
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5402	18.201	NaN	82053	30	0	20125	0.106	+			38508	SSAVTSVAK	9	86	425.23763569766936	848.4607184621387	2	425.2375183105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSAVTSVAK_	ENSG00000165949|ENST00000612813|IFI27;nc|ENSG00000165949|P40305-1|IFI27	190.2614974402762	0.00026591377982909756	6				NaN	NaN	0	NaN	2793	2607	5400
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5403	18.203	NaN	27012	30	0	20115	0.106	+			32254	QTLDKVVRK	9	55	362.8926855952659	1085.6562273859977	3	362.892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QTLDKVVRK_	ENSG00000102893|ENST00000323584|PHKB;nc|ENSG00000102893|Q93100-2|PHKB;nc|ENSG00000102893|Q93100-3|PHKB;nc|ENSG00000102893|Q93100-4|PHKB;PHKB|p.G644Efs*2|1|0.12|ENSG00000102893|chr16:47650874-47650874|A/-|frameshift_variant;PHKB|p.L392*|1|0.37|ENSG00000102893|chr16:47594182-47594182|T/-|frameshift_variant;PHKB|p.N422Ifs*52|1|0.46|ENSG00000102893|chr16:47596427-47596427|A/-|frameshift_variant	56.72105179125745	0.24094814563026265	6				NaN	NaN	0	NaN	2794	2607	5400
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5404	18.205	NaN	6058.5	30	0	493.73	0.106	+			34907	SAAEASRAM	9	61	447.2109680175781	NaN	0	447.2109680175781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SAAEASRAM_	ENSG00000101940|ENST00000376729|WDR13;nc|ENSG00000101940|Q9H1Z4-2|WDR13	88.17693792209575	0.04527150213038833	6				NaN	NaN	0	NaN	2795	2607	5400
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5405	18.207	NaN	2468.6	30	0	559.07	0.106				-1	LSFFVPCAL	9	43	351.85271612703605	1052.536318981308	3	351.8528137207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_LSFFVPC(Carbamidomethyl (C))AL_	ENST00000538010.5_1_12:122497414-122497657:+|nuORF	27.882242232435846	0.5426732730940306	6				NaN	NaN	0	NaN	2796	2607	5400
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5406	18.209	NaN	15292	30	0	2354.7	0.106	+			38274	SQPLDFEKIQ	10	82	402.21228755246455	1203.6150332575937	3	402.21234130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SQPLDFEKIQ_	ENSG00000196159|ENST00000394329|FAT4;FAT4|p.D3606Sfs*31|1|0.07|ENSG00000196159|chr4:125451831-125451832|-/AGTAAAGG|frameshift_variant;FAT4|p.E3388Gfs*4|1|0.35|ENSG00000196159|chr4:125451179-125451179|A/-|frameshift_variant;FAT4|p.E4539Rfs*31|1|0.12|ENSG00000196159|chr4:125490431-125490431|C/-|frameshift_variant;FAT4|p.K4477Rfs*15|1|0.36|ENSG00000196159|chr4:125490247-125490247|G/-|frameshift_variant;FAT4|p.K4532Efs*21|1|0.37|ENSG00000196159|chr4:125490410-125490411|-/G|frameshift_variant;FAT4|p.K4532Rfs*38|1|0.19|ENSG00000196159|chr4:125490411-125490411|G/-|frameshift_variant;FAT4|p.L3734Ffs*22|1|0.27|ENSG00000196159|chr4:125452211-125452212|-/T|frameshift_variant;FAT4|p.L3734Yfs*8|2|0.3|ENSG00000196159|chr4:125452212-125452212|T/-|frameshift_variant;FAT4|p.Q4906Rfs*14|1|0.49|ENSG00000196159|chr4:125491536-125491536|C/-|frameshift_variant;FAT4|p.T3555Pfs*6|1|0.21|ENSG00000196159|chr4:125451679-125451679|A/-|frameshift_variant;nc|ENSG00000196159|Q6V0I7-2|FAT4;nc|ENSG00000196159|Q6V0I7-3|FAT4;nc|ENSG00000196159|Q6V0I7|FAT4	37.50817390946774	0.5721060100277453	6				NaN	NaN	0	NaN	2797	2607	5400
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5407	18.211	NaN	3213.5	30	0	347.71	0.034	+			23156	KVYGPGVAK	9	61	459.77389905775567	917.5332451823114	2	459.77410888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KVYGPGVAK_	ENSG00000196924|ENST00000369850|FLNA;FLNA|p.A1026Lfs*20|1|0.42|ENSG00000196924|chrX:154361439-154361439|C/-|frameshift_variant;FLNA|p.G2237Efs*109|1|0.28|ENSG00000196924|chrX:154352240-154352240|C/-|frameshift_variant;FLNA|p.Q1716Sfs*23|2|0.38|ENSG00000196924|chrX:154354896-154354896|G/-|frameshift_variant;FLNA|p.R2520Vfs*16|1|0.7|ENSG00000196924|chrX:154349560-154349560|G/-|frameshift_variant;nc|ENSG00000196924|P21333-2|FLNA	76.7741389293348	0.11149722112137898	6				NaN	NaN	0	NaN	2798	2607	5400
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5408	18.211	NaN	16603	30	0	1064.9	0.14	+			30886	QEKKEQKE	8	85	523.7780032772778	NaN	0	523.77783203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_QEKKEQKE_	CCDC40|p.I914Tfs*84|1|0.32|ENSG00000141519|chr17:80089792-80089793|-/C|frameshift_variant;CCDC40|p.K1058Nfs*21|1|0.06|ENSG00000141519|chr17:80097395-80097395|A/-|frameshift_variant;ENSG00000141519|ENST00000397545|CCDC40;ENST00000572253.5_1_17:78061344-78061689:+|nuORF;ENST00000574799.5_1_17:78022329-78073571:+|nuORF;nc|ENSG00000141519|Q4G0X9-2|CCDC40;nc|ENSG00000141519|Q4G0X9-3|CCDC40	79.71258880314673	1.7418937515398478	6				NaN	NaN	0	NaN	2799	2607	5400
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5427	18.248	NaN	151810	30	0	82879	0.177	+			49196	VVMRDPQTK	9	75	358.5304551510165	1072.5695360532495	3	358.5306701660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVMRDPQTK_	ENSG00000170144|ENST00000392524|HNRNPA3;ENST00000437410.2_1_1:54441353-54441674:-|nuORF;ENST00000472163.1_1_3:75263799-75264780:+|nuORF;HNRNPA3|p.K200Rfs*147|1|0.13|ENSG00000170144|chr2:177216544-177216544|A/-|frameshift_variant;HNRNPA3|p.Y267Lfs*2|1|0.62|ENSG00000170144|chr2:177216918-177216919|-/T|frameshift_variant;nc|ENSG00000170144|P51991-2|HNRNPA3	37.50817390946774	0.44948750990682723	6				NaN	NaN	0	NaN	2815	2610	5426
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5428	18.251	NaN	60654	30	0	17571	0.106	+			35790	SEAGSHTL	8	79	401.1907992615505	800.3670455899011	2	401.19061279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEAGSHTL_	ENSG00000204592|ENST00000376630|HLA-E;ENSG00000204642|ENST00000259951|HLA-F;ENSG00000234745|ENST00000412585|HLA-B;ENST00000474381.1_1_6:31323854-31324663:-|nuORF;HLA-B|p.G124Wfs*15|1|0.18|ENSG00000234745|chr6:31356416-31356417|-/A|frameshift_variant;HLA-B|p.H215Tfs*11|1|0.35|ENSG00000234745|chr6:31355569-31355569|G/-|frameshift_variant;HLA-B|p.P209Qfs*5|6|0.16|ENSG00000234745|chr6:31355586-31355586|G/-|frameshift_variant;HLA-B|p.V306Afs*13|1|0.49|ENSG00000234745|chr6:31355202-31355202|A/-|frameshift_variant;HLA-B|p.V312Cfs*22|1|0.28|ENSG00000234745|chr6:31355185-31355186|-/A|frameshift_variant;nc|ENSG00000204642|P30511-2|HLA-F;nc|ENSG00000204642|P30511|HLA-F	138.24224950522367	0.2516046410063719	6				NaN	NaN	0	NaN	2816	2610	5426
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5429	18.253	NaN	11369	30	0	2343.9	0.106			+	31762	QPFVRQRQKKK	11	77	481.6281093959269	1441.8624987879807	3	481.62762451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QPFVRQRQKKK_	REV__BRCA2|p.E3316Rfs*11|1|0.3|ENSG00000139618|chr13:32398452-32398453|-/A|frameshift_variant;REV__BRCA2|p.T2515Nfs*24|1|0.35|ENSG00000139618|chr13:32356530-32356531|-/A|frameshift_variant;REV__BRCA2|p.T2685Hfs*9|1|0.05|ENSG00000139618|chr13:32363251-32363251|A/-|frameshift_variant;REV__ENSG00000139618|ENST00000380152|BRCA2	22.561587123415745	0.7531385481947795	6				NaN	NaN	0	NaN	2817	2610	5426
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5430	18.255	NaN	5092.2	30	0	486.28	0.106			+	43514	TGSRAPVER	9	59	486.7652727118335	971.515992490467	2	486.76434326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TGSRAPVER_	REV__ENST00000421395.1_1:148902042-148902210:+|nuORF	47.95952297671804	0.32689736945648856	6				NaN	NaN	0	NaN	2818	2610	5426
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5431	18.257	NaN	2138.1	30	0	160.37	0.106			+	20948	KKDERLKQ	8	63	522.8125	NaN	0	522.8125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KKDERLKQ_	REV__L1PA8_dup4178|chr8:94121319-94127043:-|4.057818296907117|0.2856926403965029|3.83|481.0|22|1|sense	60.11826168202944	1.7418937515398478	6				NaN	NaN	0	NaN	2819	2610	5426
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5432	18.259	NaN	4388.4	30	0	1553.8	0.106	+			31008	QESQGNTGLP	10	69	515.7437584531355	1029.4729639730708	2	515.7517700195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QESQGNTGLP_	ENSG00000128271|ENST00000337539|ADORA2A	51.19269402634007	0.44601001148513897	6				NaN	NaN	0	NaN	2820	2610	5426
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5433	18.261	NaN	16644	30	0	10097	0.035	+			49099	VVLENAAKK	9	37	324.5343663891639	970.5812697676918	3	324.5342712402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VVLENAAKK_	ENSG00000171824|ENST00000376936|EXOSC10;ENST00000474216.5_1_1:11126777-11137033:-|nuORF;nc|ENSG00000171824|Q01780-2|EXOSC10	45.9519527083369	0.35044536499095585	6				NaN	NaN	0	NaN	2821	2610	5426
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5451	18.298	NaN	7639.5	30	0	752.23	0.214	+			20257	KEMTALRRK	9	65	378.2253661600204	NaN	0	378.22540283203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEMTALRRK_	ENSG00000156983|ENST00000383829|BRPF1;nc|ENSG00000156983|P55201-3|BRPF1;nc|ENSG00000156983|P55201-4|BRPF1;nc|ENSG00000156983|P55201|BRPF1	70.8162118820467	0.10318768208603292	6				NaN	NaN	0	NaN	2836	2613	5450
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5452	18.302	NaN	39510	30	0	7920.2	0.106	+			34290	RTLEPLAKK	9	94	352.5573137918998	1054.6501119758993	3	352.5572204589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RTLEPLAKK_	ENSG00000218739|ENST00000402297|CEBPZOS;ENST00000470216.1_1_2:37426847-37428252:+|nuORF	65.2775769800794	0.16962058972581526	6				NaN	NaN	0	NaN	2837	2613	5450
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5453	18.304	NaN	11587	30	0	4661.1	0.106			+	34600	RVNKPDQAP	9	45	342.189220209123	1023.545831227569	3	342.1892395019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RVNKPDQAP_	REV__ENSG00000169994|ENST00000409816|MYO7B;REV__nc|ENSG00000169994|Q6PIF6-2|MYO7B;REV__nc|ENSG00000169994|Q6PIF6|MYO7B	25.450171626174864	0.5654022654467333	6				NaN	NaN	0	NaN	2838	2613	5450
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5454	18.306	NaN	11346	30	0	3302.5	0.106	+			35634	SCGKPQQK	8	64	438.2239511004787	874.4333492677574	2	438.2237243652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SCGKPQQK_	ENST00000216160.10_1_22:39827477-39827837:+|nuORF	85.35947970620816	0.2915182781752196	6				NaN	NaN	0	NaN	2839	2613	5450
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5455	18.307	NaN	16762	30	0	3655.6	0.106	+			4771	ATNDSVVADK	10	77	510.254238094643	1018.493923256086	2	510.2537841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATNDSVVADK_	ENSG00000205220|ENST00000358514|PSMB10;ENST00000575556.1_1_16:67970119-67970555:-|nuORF	188.26969509050795	0.0004078620122677143	6				NaN	NaN	0	NaN	2840	2613	5450
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5456	18.309	NaN	3588.8	30	0	480.44	0.033			+	26319	LSVSTNKP	8	55	423.2402521029089	844.4659512726179	2	423.2398986816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSVSTNKP_	REV__ENSG00000136758|ENST00000376016|YME1L1;REV__nc|ENSG00000136758|Q96TA2-3|YME1L1;REV__nc|ENSG00000136758|Q96TA2|YME1L1;REV__YME1L1|p.N147Tfs*24|1|0.34|ENSG00000136758|chr10:27145490-27145490|T/-|frameshift_variant;REV__YME1L1|p.N311Tfs*18|1|0.26|ENSG00000136758|chr10:27134053-27134053|T/-|frameshift_variant	40.77816245573522	0.6514838689002179	6				NaN	NaN	0	NaN	2841	2613	5450
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5457	18.31	NaN	15216	30	0	4725.5	0.14	+			47255	VMRDPQTK	8	71	487.75849010496006	973.5024272767201	2	487.7578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VMRDPQTK_	ENSG00000170144|ENST00000392524|HNRNPA3;ENST00000437410.2_1_1:54441353-54441674:-|nuORF;ENST00000472163.1_1_3:75263799-75264780:+|nuORF;HNRNPA3|p.K200Rfs*147|1|0.13|ENSG00000170144|chr2:177216544-177216544|A/-|frameshift_variant;HNRNPA3|p.Y267Lfs*2|1|0.62|ENSG00000170144|chr2:177216918-177216919|-/T|frameshift_variant;nc|ENSG00000170144|P51991-2|HNRNPA3	82.7504851949679	0.3006553482314138	6				NaN	NaN	0	NaN	2842	2613	5450
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5476	18.347	NaN	28946	30	0	4264.7	0.214			+	36874	SIGDIKLELK	10	90	372.56055385719594	1114.659832171788	3	372.558349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIGDIKLELK_	REV__tr|U7SL15|U7SL15_FUSNUCopper-translocatingP-typeATPaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02035PE=3SV=1	56.43379154798735	0.3982744522255666	6				NaN	NaN	0	NaN	2858	2616	5475
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5477	18.35	NaN	17345	30	0	1828.7	0.106	+			34525	RVGTVIGSNK	10	93	515.8042654931731	1029.5939780531462	2	515.80419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RVGTVIGSNK_	ENSG00000143799|ENST00000366794|PARP1;ENST00000413631.1_1_13:111590511-111591024:+|nuORF;PARP1|p.T799Lfs*41|1|0.39|ENSG00000143799|chr1:226367491-226367491|T/-|frameshift_variant	91.26522074875469	0.12383023862516404	6				NaN	NaN	0	NaN	2859	2616	5475
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5478	18.352	NaN	4001.6	30	0	577.69	0.106	+			46934	VIYKNTHIK	9	70	558.334271481996	1114.6539900307919	2	558.3333129882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VIYKNTHIK_	ENSG00000138496|ENST00000682323|PARP9;nc|ENSG00000138496|Q8IXQ6-3|PARP9;nc|ENSG00000138496|Q8IXQ6|PARP9;PARP9|p.T633Pfs*5|2|0.22|ENSG00000138496|chr3:122537047-122537047|T/-|frameshift_variant	77.31757898189308	0.1091473830098891	6				NaN	NaN	0	NaN	2860	2616	5475
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5479	18.354	NaN	8437.1	30	0	1944.1	0.106	+			22047	KSIQSGPLK	9	65	479.2901430555551	956.5657331779103	2	479.2900085449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KSIQSGPLK_	ENSG00000132305|ENST00000410111|IMMT;ENST00000474969.5_1_2:86385703-86422514:-|nuORF;ENST00000486633.1_1_2:86400704-86422514:-|nuORF;nc|ENSG00000132305|Q16891-2|IMMT;nc|ENSG00000132305|Q16891-3|IMMT;nc|ENSG00000132305|Q16891-4|IMMT	109.43880257439609	0.029570636687953285	6				NaN	NaN	0	NaN	2861	2616	5475
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5480	18.356	NaN	5165	30	0	1212	0.106	+			37113	SISSPQPGK	9	57	450.7429564207417	899.4713599082834	2	450.74310302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SISSPQPGK_	ENSG00000136279|ENST00000448521|DBNL;nc|ENSG00000136279|Q9UJU6-2|DBNL;nc|ENSG00000136279|Q9UJU6-3|DBNL;nc|ENSG00000136279|Q9UJU6-4|DBNL;nc|ENSG00000136279|Q9UJU6-5|DBNL;nc|ENSG00000136279|Q9UJU6-6|DBNL	74.25504064058377	0.12238981753128622	6				NaN	NaN	0	NaN	2862	2616	5475
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5481	18.358	NaN	9483.6	30	0	2489.2	0.037	+			22699	KVAIKVIDKK	10	70	381.2608327586364	1140.7606688761093	3	381.2607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KVAIKVIDKK_	ENSG00000142149|ENST00000270112|HUNK;HUNK|p.K100Rfs*18|1|0.51|ENSG00000142149|chr21:31924501-31924501|A/-|frameshift_variant	93.5975768576971	0.11047702954938905	6				NaN	NaN	0	NaN	2863	2616	5475
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5482	18.358	NaN	1587.9	30	0	255.04	0.14			+	22754	KVEAQLVRL	9	58	528.3325919151067	1054.6506308970133	2	528.3331298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KVEAQLVRL_	REV__ACACB|p.I1634N|1|0.27|ENSG00000076555|chr12:109241160-109241160|T/A|missense_variant;REV__ENSG00000076555|ENST00000338432|ACACB;REV__nc|ENSG00000076555|O00763-2|ACACB;REV__nc|ENSG00000076555|O00763-3|ACACB	41.42661286455405	0.403525789677298	6				NaN	NaN	0	NaN	2864	2616	5475
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5500	18.398	NaN	7315.7	30	0	1491.8	0.214			+	10141	ESRQRELS	8	69	502.7599070931902	1003.5052612531804	2	502.75958251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ESRQRELS_	REV__ENSG00000100285|ENST00000310624|NEFH;REV__nc|ENSG00000100285|P12036-2|NEFH	40.5726180659479	0.6527593143185008	6				NaN	NaN	0	NaN	2879	2619	5499
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5501	18.401	NaN	5762.9	30	0	408.82	0.106	+			50804	YEQKAAKL	8	57	475.7690619514145	949.5235709696291	2	475.7685852050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YEQKAAKL_	ENSG00000164104|ENST00000296503|HMGB2;ENST00000511316.1_1_4:174253953-174254163:-|nuORF	74.25504064058377	0.37144338840759816	6				NaN	NaN	0	NaN	2880	2619	5499
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5502	18.403	NaN	3720.2	30	0	769.14	0.106	+			23203	KYANQSAGK	9	65	483.7541443015973	965.4937356699946	2	483.75372314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KYANQSAGK_	ENSG00000145246|ENST00000273859|ATP10D;nc|ENSG00000145246|Q9P241-2|ATP10D	54.776311868738084	0.25715957988447635	6				NaN	NaN	0	NaN	2881	2619	5499
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5503	18.405	NaN	3851.7	30	0	1052.7	0.106				-1	AGLYMSTVMD	10	49	368.49672742158083	1102.4683528649425	3	368.4967346191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_AGLYMSTVM(Oxidation (M))D_	ENST00000586650.5_1_17:41322641-41322875:+|nuORF	23.52269567125451	0.6877354443478558	6				NaN	NaN	0	NaN	2882	2619	5499
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5504	18.407	NaN	650.6	30	0	128.45	0.106	+			48453	VTLFTVFAF	9	35	348.8647155761719	NaN	0	348.8647155761719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTLFTVFAF_	ENSG00000118160|ENST00000236877|SLC8A2	25.57405402267927	0.3484490411150625	6				NaN	NaN	0	NaN	2883	2619	5499
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5505	18.409	NaN	2162	30	0	218.81	0.038	+			22591	KTSTVPPSLRK	11	41	405.24706249545085	1212.7193580865526	3	404.8607177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KTSTVPPSLRK_	ENSG00000213676|ENST00000375203|ATF6B;nc|ENSG00000213676|Q99941-2|ATF6B	33.54155758786652	0.6379676125710366	6				NaN	NaN	0	NaN	2884	2619	5499
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5506	18.409	NaN	3190.2	30	0	483.45	0.14	+			21760	KQQGPILTK	9	61	506.8112980144501	1011.6080430957002	2	506.8105773925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KQQGPILTK_	ENSG00000129351|ENST00000588657|ILF3;ENST00000587928.5_1_19:10792469-10795138:+|nuORF;nc|ENSG00000129351|Q12906-4|ILF3;nc|ENSG00000129351|Q12906-6|ILF3	166.0711670676379	0.003437550387609957	6				NaN	NaN	0	NaN	2885	2619	5499
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5525	18.448	NaN	9240.9	30	0	3457.9	0.214	+			4083	ATDKTFVEK	9	65	519.7767133246413	1037.5388737160824	2	519.77685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATDKTFVEK_	ENSG00000133026|ENST00000360416|MYH10;nc|ENSG00000133026|P35580-2|MYH10;nc|ENSG00000133026|P35580-3|MYH10;nc|ENSG00000133026|P35580-5|MYH10;nc|ENSG00000133026|P35580|MYH10	109.43880257439609	0.029570636687953285	6				NaN	NaN	0	NaN	2901	2622	5524
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5526	18.451	NaN	17572	30	0	3082.3	0.106	+			41070	SVIKNVSTK	9	73	488.2952234945816	974.5758940559632	2	488.2950439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVIKNVSTK_	ENSG00000122257|ENST00000319715|RBBP6;nc|ENSG00000122257|Q7Z6E9-2|RBBP6;nc|ENSG00000122257|Q7Z6E9-4|RBBP6;RBBP6|p.D1432Vfs*9|1|0.04|ENSG00000122257|chr16:24571360-24571361|-/TTTTCCCTTTTTC|frameshift_variant;RBBP6|p.T1475Lfs*20|1|0.3|ENSG00000122257|chr16:24571483-24571483|A/-|frameshift_variant	152.06079943815163	0.00638878961959199	6				NaN	NaN	0	NaN	2902	2622	5524
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5527	18.453	NaN	6904.9	30	0	1219.2	0.106	+			17744	IEQEKRSEI	9	66	566.303554398196	1130.5925558631918	2	566.3040771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IEQEKRSEI_	ENSG00000034510|ENST00000233143|TMSB10	96.0336014099291	0.047854655524928534	6				NaN	NaN	0	NaN	2903	2622	5524
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5528	18.455	NaN	5991.1	30	0	1669.6	0.106	+			47	AAAPAGRAM	9	47	408.2132295921364	NaN	0	408.21319580078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AAAPAGRAM_	ENSG00000115525|ENST00000638572|ST3GAL5;ENST00000484728.6_2_2:86088279-86116028:-|nuORF	38.80614096846853	0.28164298475537564	6				NaN	NaN	0	NaN	2904	2622	5524
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5529	18.457	NaN	3858.9	30	0	1468.8	0.106			+	5779	AVGRLVWHEP	10	43	388.5475133289773	1162.620710587132	3	388.5487976074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVGRLVWHEP_	REV__ENSG00000039139|ENST00000265104|DNAH5	28.081489160057373	0.6505064946289502	6				NaN	NaN	0	NaN	2905	2622	5524
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5530	18.459	NaN	2050.9	30	0	306.06	0.035			+	-1	ICGIKMEK	8	60	497.75667060560136	NaN	0	497.75665283203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),Oxidation (M)	_IC(Carbamidomethyl (C))GIKM(Oxidation (M))EK_	REV__tr|U7SYY3|U7SYY3_FUSNUHistidinekinasedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00807PE=4SV=1	30.503639358989545	1.7418937515398478	6				NaN	NaN	0	NaN	2906	2622	5524
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5531	18.459	NaN	12483	30	0	1100.7	0.144	+			34533	RVIAKALEK	9	72	343.2255500418843	1026.654820725853	3	343.2254943847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RVIAKALEK_	ENSG00000100401|ENST00000356244|RANGAP1	87.69643885390035	0.07135982304947239	6				NaN	NaN	0	NaN	2907	2622	5524
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5549	18.499	NaN	6975.5	30	0	1793.2	0.214	+			19781	KEAIRIIKG	9	63	514.3347973980699	1026.6550418629397	2	514.3348999023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEAIRIIKG_	ENST00000254958.9_1_20:10654289-10654499:-|nuORF	54.776311868738084	0.25715957988447635	6				NaN	NaN	0	NaN	2922	2625	5548
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5550	18.502	NaN	5400.9	30	0	1539.8	0.106			+	31596	QLTMAGRSPL	10	59	537.291956464843	1072.569359996486	2	537.2925415039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QLTMAGRSPL_	REV__ENSG00000153012|ENST00000382114|LGI2	55.721020083383095	0.4047570224426313	6				NaN	NaN	0	NaN	2923	2625	5548
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5551	18.505	NaN	2692.7	30	0	1402.4	0.106			+	9454	EKLVDAHPI	9	51	511.287645343168	1020.560737753136	2	511.287353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EKLVDAHPI_	REV__tr|U7T2L7|U7T2L7_FUSNUPropanedioldehydratasemediumsubunitOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00494PE=4SV=1	23.04248740728303	0.5879033540491928	6				NaN	NaN	0	NaN	2924	2625	5548
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5552	18.506	NaN	13748	30	0	1712.5	0.106	+			27137	MASRTSSEM	9	72	500.2151063377735	998.415659742347	2	500.2154541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MASRTSSEM_	ENSG00000265972|ENST00000582401|TXNIP;ENST00000488537.1_1_1:145440673-145441098:+|nuORF;nc|ENSG00000265972|Q9H3M7-2|TXNIP	172.24860141594272	0.002383092361811508	6				NaN	NaN	0	NaN	2925	2625	5548
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5553	18.508	NaN	6137.5	30	0	1539.9	0.106	+			35624	SCCPVGCSK	9	56	470.6878630295174	939.3611731258349	2	470.6872863769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_SCC(Carbamidomethyl (C))PVGCSK_	ENSG00000198417|ENST00000334350|MT1F;ENST00000564295.1_1_16:56692857-56693073:+|nuORF	65.46538089061403	0.16805504838372562	6				NaN	NaN	0	NaN	2926	2625	5548
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5554	18.51	NaN	1502.2	30	0	338.61	0.037	+			34594	RVMPDGKIQK	10	55	586.3345899572957	1170.6546269813914	2	586.3344116210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RVMPDGKIQK_	ENSG00000116120|ENST00000281828|FARSB;FARSB|p.I265*|1|0.36|ENSG00000116120|chr2:222630168-222630168|T/-|frameshift_variant;FARSB|p.I364Nfs*7|1|0.04|ENSG00000116120|chr2:222624353-222624354|-/AACACTCCTTATTG|frameshift_variant	72.09557110113691	0.26019946548822415	6				NaN	NaN	0	NaN	2927	2625	5548
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5555	18.511	NaN	1123.2	30	0	138.97	0.141	+			22278	KTCLLWAR	8	46	495.78145404179674	989.5483551503935	2	495.7765808105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KTCLLWAR_	ENST00000590513.2_1_17:40706533-40706686:-|nuORF	37.15910966729921	0.6739408393984688	6				NaN	NaN	0	NaN	2928	2625	5548
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5573	18.548	NaN	4614.1	30	0	719.92	0.214	+			48335	VTGGATGIGK	10	63	430.7454219948325	NaN	0	430.74542236328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTGGATGIGK_	ENSG00000115425|ENST00000265322|PECR;ENST00000474093.5_1_2:216929948-216946521:-|nuORF;ENST00000487318.6_1_2:216928831-216946521:-|nuORF;ENST00000497889.5_1_2:216915539-216946464:-|nuORF	63.53385203322761	0.20542021811828953	6				NaN	NaN	0	NaN	2943	2628	5572
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5574	18.552	NaN	3907.2	30	0	535.63	0.106	+			4	AAAAALQAK	9	59	407.7429721364236	813.4713913396472	2	407.74267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAAAALQAK_	ENSG00000174444|ENST00000307961|RPL4;ENST00000567229.5_1_15:66791747-66793486:-|nuORF	79.45101966838831	0.09992237243120712	6				NaN	NaN	0	NaN	2944	2628	5572
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5575	18.554	NaN	8674.9	30	0	2254.2	0.106	+			11348	FLFLLDEQ	8	74	512.7695922535668	1023.5246315739336	2	512.7689208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FLFLLDEQ_	ENSG00000049656|ENST00000320895|CLPTM1L;ENST00000503042.5_1_5:1325844-1330799:-|nuORF	58.78195531508484	0.5138399468736706	6				NaN	NaN	0	NaN	2945	2628	5572
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5576	18.556	NaN	3251.6	30	0	754.35	0.106			+	-1	DFLLLCFACA	10	51	391.51917302141186	NaN	0	391.5191955566406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_DFLLLC(Carbamidomethyl (C))FACA_	REV__ENST00000285518.10_1_8:6615806-6616025:+|nuORF	29.170058357718403	0.40439580130713204	6				NaN	NaN	0	NaN	2946	2628	5572
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5577	18.558	NaN	4365.8	30	0	565.93	0.106	+			19765	KEAEKSPQL	9	61	515.2822906576148	1028.5500283820295	2	515.2822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEAEKSPQL_	ENSG00000116213|ENST00000270708|WRAP73;ENST00000469643.1_1_1:3549956-3551942:-|nuORF;ENST00000471223.1_1_1:3549956-3550340:-|nuORF;ENST00000497940.5_1_1:3549956-3553597:-|nuORF	85.86182877749512	0.07653218437724067	6				NaN	NaN	0	NaN	2947	2628	5572
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5578	18.56	NaN	3123.1	30	0	393.64	0.032	+			45909	VAQGGGRAL	9	49	414.73784696592384	NaN	0	414.73785400390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VAQGGGRAL_	ENSG00000140553|ENST00000418476|UNC45A;ENST00000487875.5_1_15:91491769-91496943:+|nuORF;nc|ENSG00000140553|Q9H3U1-2|UNC45A	29.14955571784316	0.3303970763161698	6				NaN	NaN	0	NaN	2948	2628	5572
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5579	18.56	NaN	1866.5	30	0	183.04	0.141				-1	RTGPACMPTK	10	59	559.7754688610056	1117.5363847888111	2	559.776611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_RTGPAC(Carbamidomethyl (C))MPTK_	ENST00000311604.7_1_11:1902696-1904704:+|nuORF;LSP1|p.Q108Sfs*31|3|0.4|ENSG00000130592|chr11:1881556-1881556|C/-|frameshift_variant	65.15724298150197	0.31893571707528906	6				NaN	NaN	0	NaN	2949	2628	5572
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5597	18.598	NaN	307550	30	0	34020	0.184	+			34390	RTSEIYVHR	9	135	387.5440549764467	1159.6103355295402	3	387.54388427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTSEIYVHR_	ENSG00000089737|ENST00000621632|DDX24;ENST00000555762.1_1_14:94517539-94521656:-|nuORF;nc|ENSG00000089737|Q9GZR7-2|DDX24	117.7056744995986	0.022588689529990102	6				NaN	NaN	0	NaN	2964	2631	5596
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5598	18.601	NaN	37611	30	0	13077	0.106	+			5126	ATSSTLVSK	9	82	447.2506790217911	892.4868051103822	2	447.2503967285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATSSTLVSK_	ENST00000332782.6_1_12:57640633-57642538:-|nuORF	109.47833844074708	0.029530294723441826	6				NaN	NaN	0	NaN	2965	2631	5596
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5599	18.604	NaN	12161	30	0	3564.7	0.106	+			24623	LGSGKVIKG	9	78	429.7740871732487	857.5336214132974	2	429.7739562988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LGSGKVIKG_	ENSG00000119321|ENST00000238256|FKBP15;FKBP15|p.K665Rfs*9|2|0.21|ENSG00000119321|chr9:113178722-113178722|T/-|frameshift_variant;nc|ENSG00000119321|Q5T1M5-2|FKBP15;nc|ENSG00000119321|Q5T1M5-3|FKBP15	84.9155231211612	0.07920012719736333	6				NaN	NaN	0	NaN	2966	2631	5596
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5600	18.605	NaN	8882	30	0	1437.6	0.106	+			6017	AVMDSDTTGK	10	78	512.7347245661043	1023.4548961990087	2	512.734619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVMDSDTTGK_	ENSG00000126247|ENST00000246533|CAPNS1	49.536043120802724	0.461275219792494	6				NaN	NaN	0	NaN	2967	2631	5596
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5601	18.607	NaN	26122	30	0	8824.3	0.106	+			4272	ATGGLEGKMK	10	53	331.1794844905043	990.516624071713	3	331.1795349121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATGGLEGKMK_	AHNAK|p.I657Nfs*25|1|0.36|ENSG00000124942|chr11:62532447-62532448|-/T|frameshift_variant;AHNAK|p.K2311Rfs*11|1|0.33|ENSG00000124942|chr11:62527487-62527487|G/-|frameshift_variant;AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;AHNAK|p.L2124Ifs*37|1|0.04|ENSG00000124942|chr11:62528048-62528049|-/ATGCCTGATA|frameshift_variant;AHNAK|p.S1888Qfs*8|1|0.11|ENSG00000124942|chr11:62528755-62528756|-/G|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK	47.657333605630114	0.47858658696240314	6				NaN	NaN	0	NaN	2968	2631	5596
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5602	18.609	NaN	6868.8	30	0	1344.8	0.106	+			3667	ASYMGKENLKK	11	67	423.56058820688025	NaN	0	423.56060791015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASYMGKENLKK_	ENSG00000054654|ENST00000555002|SYNE2;ENST00000557005.1_1_14:64469755-64489638:+|nuORF;nc|ENSG00000054654|Q8WXH0|SYNE2;SYNE2|p.A5240Qfs*5|1|0.07|ENSG00000054654|chr14:64152639-64152639|G/-|frameshift_variant;SYNE2|p.D3074Ffs*8|1|0.07|ENSG00000054654|chr14:64053132-64053133|-/TTTCTTTTTCAAATACTTG|frameshift_variant;SYNE2|p.F2563Ifs*28|1|0.34|ENSG00000054654|chr14:64051593-64051594|-/A|frameshift_variant;SYNE2|p.F2840Lfs*3|1|0.38|ENSG00000054654|chr14:64052427-64052427|T/-|frameshift_variant;SYNE2|p.F4992Lfs*13|1|0.39|ENSG00000054654|chr14:64140067-64140067|T/-|frameshift_variant;SYNE2|p.L5308Ifs*18|1|0.12|ENSG00000054654|chr14:64158750-64158751|GG/-|frameshift_variant;SYNE2|p.M1669Wfs*6|1|0.36|ENSG00000054654|chr14:64017707-64017707|A/-|frameshift_variant;SYNE2|p.N1656Mfs*19|1|0.18|ENSG00000054654|chr14:64017669-64017669|A/-|frameshift_variant;SYNE2|p.S1830Kfs*9|1|0.34|ENSG00000054654|chr14:64021985-64021986|-/A|frameshift_variant;SYNE2|p.S6651Rfs*83|1|0.29|ENSG00000054654|chr14:64220596-64220597|-/G|frameshift_variant	55.721020083383095	0.2739492330573669	6				NaN	NaN	0	NaN	2969	2631	5596
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5603	18.611	NaN	4725.6	30	0	1307.3	0.039				-1	SIMKWNRER	9	41	412.54857950837055	1234.6239091253117	3	412.54864501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_SIM(Oxidation (M))KWNRER_	ENSG00000186010|ENST00000507754|NDUFA13;ENST00000511584.2_1_19:19627047-19637070:+|nuORF;ENST00000586674.1_1_19:19627047-19643527:+|nuORF;nc|ENSG00000186010|Q9P0J0-2|NDUFA13	31.529811441608018	0.5085848003137583	6				NaN	NaN	0	NaN	2970	2631	5596
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5621	18.646	NaN	22997	30	0	4309.9	0.214			+	44711	TTKVETTK	8	67	454.2584899761224	906.5024270190448	2	454.2583923339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTKVETTK_	REV__IGDCC3|p.A767V|2|0.09|ENSG00000174498|chr15:65329054-65329054|G/A|missense_variant	71.87747018426188	0.391254423828572	6				NaN	NaN	0	NaN	2985	2634	5620
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5622	18.65	NaN	18717	30	0	1788	0.106	+			16854	HPETSGERSQA	11	79	599.7761291633498	1197.5377053934994	2	599.7764282226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HPETSGERSQA_	nc|ENSG00000182606|Q9UPV9-2|TRAK1	56.43379154798735	0.3552884390983883	6				NaN	NaN	0	NaN	2986	2634	5620
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5623	18.652	NaN	4615	30	0	713.79	0.106	+			19799	KEASTTVRV	9	62	495.78145404179674	989.5483551503935	2	495.782470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEASTTVRV_	ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;nc|ENSG00000185164|Q5JPE7-3|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2;NOMO1|p.P1102Hfs*42|1|0.36|ENSG00000103512|chr16:14886838-14886838|C/-|frameshift_variant	63.53385203322761	0.18415635464017938	6				NaN	NaN	0	NaN	2987	2634	5620
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5624	18.653	NaN	3162.7	30	0	460.4	0.106			+	7426	DERVKGAHLK	10	53	384.8879044840042	1151.6418840522126	3	384.8877258300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DERVKGAHLK_	REV__ENSG00000163083|ENST00000295228|INHBB	50.033510581677724	0.4566913063131936	6				NaN	NaN	0	NaN	2988	2634	5620
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5625	18.655	NaN	4543.9	30	0	631.2	0.106	+			15922	HADASSKVL	9	58	464.2486004030927	926.4826478729855	2	464.2482604980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HADASSKVL_	ENSG00000166169|ENST00000370162|POLL;ENST00000339310.7_1_10:103343400-103347291:-|nuORF	93.1432384553994	0.056003526918089595	6				NaN	NaN	0	NaN	2989	2634	5620
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5626	18.657	NaN	3436.7	30	0	399.97	0.034			+	30517	QAGRSTILV	9	63	472.7799304402573	943.5453079473147	2	473.2732849121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QAGRSTILV_	REV__ENSG00000172878|ENST00000315796|METAP1D;REV__ENST00000488581.5_1_2:172944999-172945131:+|nuORF	37.15910966729921	0.4535818937225704	6				NaN	NaN	0	NaN	2990	2634	5620
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5627	18.658	NaN	2083.9	30	0	301.32	0.139	+			16413	HERDAGVVC	9	52	493.22980563381157	984.4450583344232	2	493.2296142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HERDAGVVC_	ENSG00000108679|ENST00000262776|LGALS3BP;ENST00000587251.5_1_17:76967660-76972124:-|nuORF;ENST00000592255.1_1_17:76969205-76970848:-|nuORF	26.69291269510374	0.5537881896960711	6				NaN	NaN	0	NaN	2991	2634	5620
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5645	18.696	NaN	72911	30	0	26818	0.197	+			14483	GTCGKSLISK	10	98	525.7848374491986	1049.555121965197	2	525.7843017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GTC(Carbamidomethyl (C))GKSLISK_	ENSG00000118322|ENST00000327245|ATP10B	150.81021883065287	0.008351675499118036	6				NaN	NaN	0	NaN	3006	2637	5644
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5646	18.699	NaN	7645.3	30	0	1273.3	0.106	+			34008	RSIDKPLAR	9	63	528.3197956309116	1054.625038328623	2	528.3202514648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RSIDKPLAR_	ENST00000456324.5_1_19:36726911-36727052:+|nuORF	60.1669710687717	0.2122228167747824	6				NaN	NaN	0	NaN	3007	2637	5644
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5647	18.701	NaN	4522.4	30	0	767.11	0.106	+			3103	ASGGYIGGK	9	59	405.2115343820617	808.4085158309234	2	405.2110290527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASGGYIGGK_	ENSG00000100596|ENST00000216484|SPTLC2	60.11826168202944	0.21262886028301267	6				NaN	NaN	0	NaN	3008	2637	5644
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5648	18.703	NaN	8036.5	30	0	888.36	0.106	+			983	AEKEMHNL	8	63	486.23442889409057	970.4543048549812	2	486.2341613769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEKEMHNL_	ENSG00000101782|ENST00000339486|RIOK3;ENST00000581302.5_1_18:21033283-21057068:+|nuORF;nc|ENSG00000101782|O14730-2|RIOK3;RIOK3|p.L482*|1|0.4|ENSG00000101782|chr18:23479412-23479412|T/-|frameshift_variant	104.74654710444128	0.24806011021879068	6				NaN	NaN	0	NaN	3009	2637	5644
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5649	18.705	NaN	4990.1	30	0	980.03	0.106			+	7113	DAAELILHKL	10	51	374.8886843807029	NaN	0	374.8887023925781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DAAELILHKL_	REV__ENSG00000143437|ENST00000358595|ARNT;REV__ENSG00000172379|ENST00000303329|ARNT2;REV__ENST00000468970.1_1_1:150804279-150808966:-|nuORF;REV__ENST00000529181.1_1_15:80696764-80767593:+|nuORF;REV__ENST00000531595.3_1_15:80762598-80780115:+|nuORF;REV__nc|ENSG00000143437|P27540-2|ARNT;REV__nc|ENSG00000143437|P27540-3|ARNT;REV__nc|ENSG00000143437|P27540-4|ARNT;REV__nc|ENSG00000172379|Q9HBZ2-2|ARNT2	33.921630207806714	0.38879399011744475	6				NaN	NaN	0	NaN	3010	2637	5644
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5650	18.707	NaN	4026.6	30	0	649.08	0.106	+			35186	SAINDKSIVKK	11	54	401.5747375488281	NaN	0	401.5747375488281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SAINDKSIVKK_	ENSG00000131351|ENST00000253669|HAUS8;nc|ENSG00000131351|Q9BT25-2|HAUS8;nc|ENSG00000131351|Q9BT25-3|HAUS8	27.64392233501311	0.4422187622456888	6				NaN	NaN	0	NaN	3011	2637	5644
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5651	18.708	NaN	3766.4	30	0	413.58	0.039	+			5335	ATVPKTEIREK	11	58	424.58216130643524	1270.7246545195057	3	424.581787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATVPKTEIREK_	ENSG00000138326|ENST00000372360|RPS24;ENST00000465692.1_1_10:79795142-79808843:+|nuORF;ENST00000466129.5_1_10:79793659-79795541:+|nuORF;ENST00000478655.5_1_10:79793659-79797065:+|nuORF;ENST00000485708.6_1_10:79793659-79797725:+|nuORF;nc|ENSG00000138326|P62847-3|RPS24;nc|ENSG00000138326|P62847-4|RPS24;nc|ENSG00000138326|P62847|RPS24	38.714083909724	0.5755383074156426	6				NaN	NaN	0	NaN	3012	2637	5644
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5669	18.746	NaN	64427	30	0	12207	0.214	+			111	AAEKGVRTL	9	91	472.7799304402573	943.5453079473147	2	472.7795104980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAEKGVRTL_	ENSG00000105355|ENST00000221957|PLIN3;nc|ENSG00000105355|O60664-3|PLIN3;nc|ENSG00000105355|O60664-4|PLIN3	125.71293069911285	0.017741295328254008	6				NaN	NaN	0	NaN	3027	2640	5668
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5670	18.749	NaN	52039	30	0	23132	0.106	+			14446	GTATTMVSK	9	79	448.230813787108	894.447074641016	2	448.2305908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTATTMVSK_	ENSG00000204217|ENST00000374580|BMPR2	126.24258497203832	0.01742065577488747	6				NaN	NaN	0	NaN	3028	2640	5668
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5671	18.751	NaN	62687	30	0	12055	0.106	+			39448	STEKIYIRK	9	98	379.8924982007301	1136.6556652023903	3	379.892333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STEKIYIRK_	ENSG00000120798|ENST00000333003|NR2C1;ENSG00000177463|ENST00000425241|NR2C2;ENST00000475707.5_1_3:15045421-15079667:+|nuORF;nc|ENSG00000120798|P13056-2|NR2C1;nc|ENSG00000120798|P13056-3|NR2C1;nc|ENSG00000177463|P49116-2|NR2C2;NR2C2|p.F563Lfs*10|1|0.4|ENSG00000177463|chr3:15042899-15042899|T/-|frameshift_variant	72.87924865735499	0.12833875048249987	6				NaN	NaN	0	NaN	3029	2640	5668
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5672	18.753	NaN	4100.4	30	0	639.26	0.106	+			40577	SVAEHPLSR	9	66	498.26731186816323	994.5200708031265	2	498.2670593261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVAEHPLSR_	ENSG00000142207|ENST00000382751|URB1;URB1|p.R2106W|1|0.08|ENSG00000142207|chr21:32316784-32316784|G/A|missense_variant	85.16082228582465	0.07850854922700509	6				NaN	NaN	0	NaN	3030	2640	5668
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5673	18.755	NaN	19672	30	0	2503.6	0.106	+			15967	HAHVDKVTY	9	86	535.2749481062938	1068.5353432793875	2	535.2752685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HAHVDKVTY_	ENSG00000181396|ENST00000313056|OGFOD3;nc|ENSG00000181396|Q6PK18-2|OGFOD3	132.757866228626	0.013877640931359021	6				NaN	NaN	0	NaN	3031	2640	5668
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5674	18.757	NaN	8449.6	30	0	1255.2	0.106	+			19977	KEHININL	8	61	490.7797850568137	979.5450171804274	2	490.7796630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KEHININL_	LRRK1|p.K1406N|1|0.13|ENSG00000154237|chr15:101055109-101055109|G/T|missense_variant	68.78682469695295	0.41700713582915416	6				NaN	NaN	0	NaN	3032	2640	5668
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5675	18.759	NaN	1551.3	30	0	269.82	0.034				-1	LCAALGCLS	9	55	454.2219430133092	NaN	0	454.221923828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_LCAALGC(Carbamidomethyl (C))LS_	C8B|p.K161Nfs*19|1|0.34|ENSG00000021852|chr1:56954736-56954736|T/-|frameshift_variant;ENSG00000021852|ENST00000371237|C8B	55.50420428727701	0.16876052142120426	6				NaN	NaN	0	NaN	3033	2640	5668
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5694	18.793	NaN	222240	30	0	60193	0.108	+			40298	STSSPYVSK	9	86	478.2401027332954	954.4656525333908	2	478.2396545410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STSSPYVSK_	ENSG00000137501|ENST00000359152|SYTL2;ENST00000438197.2_1_11:85444955-85468786:-|nuORF;nc|ENSG00000137501|Q9HCH5-13|SYTL2;nc|ENSG00000137501|Q9HCH5-14|SYTL2;nc|ENSG00000137501|Q9HCH5-15|SYTL2;nc|ENSG00000137501|Q9HCH5-6|SYTL2;nc|ENSG00000137501|Q9HCH5|SYTL2;SYTL2|p.Q663Tfs*35|1|0.14|ENSG00000137501|chr11:85709344-85709345|-/T|frameshift_variant	150.36159442982594	0.006784847064083231	6				NaN	NaN	0	NaN	3049	2643	5693
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5695	18.795	NaN	59069	30	0	23439	0.106	+			3008	ASFDKAKLK	9	65	504.2974067331564	1006.5802605331128	2	504.2978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASFDKAKLK_	ENSG00000034510|ENST00000233143|TMSB10	195.04605151776784	5.427472092243166E-05	6				NaN	NaN	0	NaN	3050	2643	5693
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5696	18.797	NaN	5959.4	30	0	1068	0.106	+			41745	SVSKDVVVSK	10	68	524.3058561124568	1046.5971592917135	2	524.3060913085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVSKDVVVSK_	E4F1|p.E388Gfs*55|1|0.48|ENSG00000167967|chr16:2233539-2233540|-/G|frameshift_variant;E4F1|p.E717Rfs*3|1|0.25|ENSG00000167967|chr16:2235361-2235361|C/-|frameshift_variant;ENSG00000167967|ENST00000301727|E4F1;ENST00000569796.1_1_16:2282158-2283271:+|nuORF	141.91077491472637	0.010244635003291853	6				NaN	NaN	0	NaN	3051	2643	5693
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5697	18.799	NaN	3864.8	30	0	404.85	0.106			+	-1	QPARRCAAP	9	65	513.7650658225311	1025.5155787118622	2	513.7645263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_QPARRC(Carbamidomethyl (C))AAP_	REV__ENST00000421462.5_1_2:159314066-159314201:+|nuORF	47.91560031466742	0.327412564698279	6				NaN	NaN	0	NaN	3052	2643	5693
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5698	18.801	NaN	3759.2	30	0	581.4	0.106	+			4092	ATDNAKIIGK	10	67	515.7980470426521	1029.5815411521041	2	515.798095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATDNAKIIGK_	ENSG00000135945|ENST00000258428|REV1;ENST00000413697.5_1_2:100019089-100065949:-|nuORF;nc|ENSG00000135945|Q9UBZ9-2|REV1;REV1|p.T1079Pfs*12|1|0.42|ENSG00000135945|chr2:99403038-99403038|T/-|frameshift_variant	91.26522074875469	0.12383023862516404	6				NaN	NaN	0	NaN	3053	2643	5693
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5699	18.803	NaN	4039.2	30	0	765.05	0.106			+	21245	KLKKFDPN	8	58	495.292474665774	988.5703963983481	2	495.29217529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KLKKFDPN_	REV__ENST00000405166.1_1_6:111368073-111368568:-|nuORF	37.15910966729921	0.6739408393984688	6				NaN	NaN	0	NaN	3054	2643	5693
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5700	18.804	NaN	8320.2	30	0	893.24	0.106			+	-1	SARIDCIPL	9	64	348.854391501961	1043.541345106083	3	348.8538818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_SARIDC(Carbamidomethyl (C))IPL_	REV__MTHFD1|p.R889C|1|0.13|ENSG00000100714|chr14:64454822-64454822|C/T|missense_variant	49.44154591367651	0.3095138337212152	6				NaN	NaN	0	NaN	3055	2643	5693
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5701	18.806	NaN	4244.9	30	0	226.9	0.043				-1	CHRSEKTCRRW	11	77	506.91067321517255	1517.7101902457177	3	507.2447509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Carbamidomethyl (C)	_CHRSEKTC(Carbamidomethyl (C))RRW_	ENSG00000163291|ENST00000512733|PAQR3;ENST00000512760.5_1_4:79841695-79860421:-|nuORF;nc|ENSG00000163291|Q6TCH7-2|PAQR3;nc|ENSG00000163291|Q6TCH7-3|PAQR3	31.068146907933308	0.6639116734509778	6				NaN	NaN	0	NaN	3056	2643	5693
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5709	18.823	NaN	67249	30	0	16809	0.214	+			3732	ATAAVSSMK	9	78	433.225842115948	864.437131298696	2	433.225830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATAAVSSMK_	ADD3-MXI1|1|fusion;ENSG00000148700|ENST00000356080|ADD3;nc|ENSG00000148700|Q9UEY8-2|ADD3	214.23057602635166	3.58823238688865E-08	6				NaN	NaN	0	NaN	3061	2646	5708
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5710	18.827	NaN	8440.5	30	0	1351.8	0.106	+			40097	STNSPVGVSK	10	66	488.2590158234907	974.5034787137814	2	488.2587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STNSPVGVSK_	ENSG00000165671|ENST00000439151|NSD1;nc|ENSG00000165671|Q96L73-2|NSD1;nc|ENSG00000165671|Q96L73-3|NSD1;NSD1|p.K1753Sfs*10|1|0.17|ENSG00000165671|chr5:177267669-177267669|A/-|frameshift_variant	84.81729255234993	0.1607459278640679	6				NaN	NaN	0	NaN	3062	2646	5708
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5711	18.829	NaN	5767.6	30	0	1435.8	0.106			+	-1	SNKMFYFD	8	70	534.2281879025292	1066.4418228718582	2	534.228759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_SNKM(Oxidation (M))FYFD_	REV__ZFAT|p.G893S|1|0.28|ENSG00000066827|chr8:134588282-134588282|C/T|missense_variant	63.30626980617807	0.4690498839812213	6				NaN	NaN	0	NaN	3063	2646	5708
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5712	18.831	NaN	3277.5	30	0	533.96	0.106	+			13267	GISSMLSLN	9	62	469.23509947631703	936.4556460194341	2	469.23516845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_GISSM(Oxidation (M))LSLN_	ENSG00000096433|ENST00000605930|ITPR3;ITPR3|p.R2604Gfs*30|1|0.27|ENSG00000096433|chr6:33694944-33694944|C/-|frameshift_variant	69.6276240434122	0.14239879520340665	6				NaN	NaN	0	NaN	3064	2646	5708
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5713	18.833	NaN	2734.3	30	0	401.5	0.106			+	15710	GVPPNSPG	8	35	362.6848330149264	723.3551130966529	2	362.68487548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GVPPNSPG_	REV__ENSG00000183638|ENST00000382483|RP1L1;REV__RP1L1|p.G2243Rfs*6|1|0.25|ENSG00000183638|chr8:10607371-10607372|-/T|frameshift_variant;REV__RP1L1|p.V381Cfs*109|1|0.28|ENSG00000183638|chr8:10612957-10612957|C/-|frameshift_variant	20.481830146152948	0.8005983782650069	6				NaN	NaN	0	NaN	3065	2646	5708
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5714	18.834	NaN	4069.7	30	0	585.38	0.106	+			24081	LEKGKEAVV	9	70	486.7898295847748	971.5651062363496	2	486.78961181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LEKGKEAVV_	ENSG00000124228|ENST00000618172|DDX27;ENST00000471144.1_1_20:47852884-47860241:+|nuORF;ENST00000484427.5_1_20:47852594-47860368:+|nuORF;nc|ENSG00000124228|Q96GQ7|DDX27	61.691277971877994	0.19951612995419254	6				NaN	NaN	0	NaN	3066	2646	5708
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5715	18.836	NaN	2447.3	30	0	480.02	0.037			+	40775	SVDLSRLPLE	10	35	376.8793911564486	1127.616344069546	3	377.2137451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVDLSRLPLE_	REV__ENST00000536416.5_1_12:121783870-121790143:-|nuORF	20.94693142431847	0.7087701759873708	6				NaN	NaN	0	NaN	3067	2646	5708
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5733	18.874	NaN	44195	30	0	19142	0.214			+	31064	QEYLKQLQ	8	84	525.2868755357156	NaN	0	525.286865234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QEYLKQLQ_	REV__ENSG00000143376|ENST00000458013|SNX27;REV__ENST00000368841.6_1_1:151584666-151666074:+|nuORF;REV__nc|ENSG00000143376|Q96L92-2|SNX27;REV__nc|ENSG00000143376|Q96L92-3|SNX27	118.74307786436346	1.7418937515398478	6				NaN	NaN	0	NaN	3082	2649	5732
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5734	18.877	NaN	26018	30	0	4592.2	0.106	+			6261	AVSKLYASK	9	81	483.78465132744174	965.5547497216835	2	483.7842712402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVSKLYASK_	ENSG00000115561|ENST00000263856|CHMP3;ENST00000466032.1_1_2:86754275-86769420:-|nuORF;nc|ENSG00000115561|Q9Y3E7-2|CHMP3;nc|ENSG00000115561|Q9Y3E7-3|CHMP3	142.36107225718385	0.009372392051035914	6				NaN	NaN	0	NaN	3083	2649	5732
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5735	18.879	NaN	2193	30	0	360.1	0.106				-1	KACNPQPN	8	52	464.71882586281265	927.4230987924253	2	464.718505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_KAC(Carbamidomethyl (C))NPQPN_	ENSG00000151176|ENST00000280800|PLBD2;nc|ENSG00000151176|Q8NHP8-2|PLBD2	25.450171626174864	0.7628259754767981	6				NaN	NaN	0	NaN	3084	2649	5732
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5736	18.881	NaN	7677.9	30	0	1484.6	0.106			+	43742	TLCGFVTVNE	10	72	361.5100830283477	NaN	0	361.51007080078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TLCGFVTVNE_	REV__ENSG00000137103|ENST00000643932|TMEM8B;REV__ENST00000490199.2_1_9:35841173-35846157:+|nuORF;REV__nc|ENSG00000137103|A6NDV4-2|TMEM8B;REV__nc|ENSG00000137103|A6NDV4-3|TMEM8B;REV__nc|ENSG00000137103|A6NDV4|TMEM8B	51.33545320467046	0.297159550775418	6				NaN	NaN	0	NaN	3085	2649	5732
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5737	18.883	NaN	6227.6	30	0	2181.1	0.106	+			14633	GTGPNVPPR	9	56	447.74338825584124	893.4722235784825	2	447.7429504394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTGPNVPPR_	ENSG00000173517|ENST00000682557|PEAK1;PEAK1|p.F1319Lfs*11|1|0.37|ENSG00000173517|chr15:77133125-77133125|A/-|frameshift_variant;PEAK1|p.N1433Tfs*19|1|0.1|ENSG00000173517|chr15:77115099-77115099|T/-|frameshift_variant;PEAK1|p.Q863Kfs*186|1|0.48|ENSG00000173517|chr15:77179340-77179340|G/-|frameshift_variant	44.116797842482775	0.37197099687881774	6				NaN	NaN	0	NaN	3086	2649	5732
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5738	18.885	NaN	5226.5	30	0	1019.7	0.036			+	22237	KSYKLVVSR	9	65	540.3324449020582	1078.6503368709164	2	540.3323364257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KSYKLVVSR_	REV__ENST00000438378.2_1_2:132278647-132279013:+|nuORF	58.22992032128504	0.22837015374068087	6				NaN	NaN	0	NaN	3087	2649	5732
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5739	18.885	NaN	12359	30	0	2475.1	0.144	+			50860	YEVTSKVDL	9	58	351.85419418649747	1052.5407531596925	3	351.8538513183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YEVTSKVDL_	COL21A1|p.E790Dfs*24|1|0.04|ENSG00000124749|chr6:56060778-56060779|-/AGAGGATATAAGTGAGGTGAAGAAGAAAACAGATAACA|frameshift_variant;COL21A1|p.G902Mfs*52|1|0.44|ENSG00000124749|chr6:56057828-56057829|-/GGAGGGCCCTCTGGACCTAAGATGGGACATT|frameshift_variant;COL21A1|p.K712Rfs*48|1|0.1|ENSG00000124749|chr6:56064615-56064615|T/-|frameshift_variant;ENSG00000124749|ENST00000244728|COL21A1;nc|ENSG00000124749|Q96P44-3|COL21A1	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	3088	2649	5732
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5757	18.924	NaN	58891	30	0	10015	0.152	+			22961	KVQTAVTMK	9	76	503.29240596622515	1004.5702589992503	2	503.2922668457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVQTAVTMK_	ENSG00000131165|ENST00000397901|CHMP1A;ENST00000550872.1_1_16:89715668-89724092:-|nuORF	191.44940797552337	0.00014666235100428603	6				NaN	NaN	0	NaN	3103	2652	5756
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5758	18.926	NaN	6037.1	30	0	628.73	0.106	+			20201	KELEKTYSA	9	70	534.7822169105685	1067.549880887937	2	534.7830200195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KELEKTYSA_	ENSG00000160789|ENST00000368300|LMNA;ENST00000496738.5_1_1:156104631-156105741:+|nuORF;nc|ENSG00000160789|P02545-2|LMNA;nc|ENSG00000160789|P02545-3|LMNA;nc|ENSG00000160789|P02545-4|LMNA;nc|ENSG00000160789|P02545-5|LMNA;nc|ENSG00000160789|P02545-6|LMNA	88.17693792209575	0.07000514020414955	6				NaN	NaN	0	NaN	3104	2652	5756
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5759	18.928	NaN	22216	30	0	2930.8	0.106	+			33052	REKELESIK	9	98	377.88408884149624	1130.6304371246888	3	377.8839416503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_REKELESIK_	ENSG00000161791|ENST00000335154|FMNL3;nc|ENSG00000161791|Q8IVF7-2|FMNL3;nc|ENSG00000161791|Q8IVF7|FMNL3	65.15724298150197	0.17062369902793603	6				NaN	NaN	0	NaN	3105	2652	5756
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5760	18.93	NaN	7004.7	30	0	1214.7	0.106	+			40142	STQIVANAK	9	70	466.2644209251046	930.5142889170093	2	466.2640075683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STQIVANAK_	ENSG00000147872|ENST00000276914|PLIN2;PLIN2|p.V348*|1|0.15|ENSG00000147872|chr9:19116520-19116520|C/-|frameshift_variant	78.26377905018397	0.10505600812668463	6				NaN	NaN	0	NaN	3106	2652	5756
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5761	18.932	NaN	3549.1	30	0	311.76	0.106			+	21071	KKLNPIRGPS	10	66	555.343253738011	1108.6719545428218	2	555.3438110351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KKLNPIRGPS_	REV__ENST00000312132.8_1_7:102916053-102920599:-|nuORF;REV__ENST00000439473.5_1_7:102916053-102920599:-|nuORF;REV__nc|ENSG00000189212|Q6NXN4|DPY19L2P1	54.722347961057174	0.4138398245444204	6				NaN	NaN	0	NaN	3107	2652	5756
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5762	18.934	NaN	23172	30	0	3278.9	0.106	+			22040	KSIPALSMETQ	11	91	402.2127783923519	1203.6165057772557	3	402.2131652832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KSIPALSMETQ_	CHAMP1|p.F485Lfs*100|1|0.3|ENSG00000198824|chr13:114325292-114325292|T/-|frameshift_variant;ENSG00000198824|ENST00000361283|CHAMP1	50.033510581677724	0.4206539900604183	6				NaN	NaN	0	NaN	3108	2652	5756
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5763	18.935	NaN	5013.1	30	0	560.77	0.034			+	27318	MHGQGMDL	8	72	460.6836867531452	919.3528205730904	2	460.68365478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Oxidation (M)	_M(Oxidation (M))HGQGM(Oxidation (M))DL_	REV__ENSG00000088827|ENST00000344754|SIGLEC1;REV__nc|ENSG00000088827|Q9BZZ2-2|SIGLEC1;REV__nc|ENSG00000088827|Q9BZZ2-3|SIGLEC1;REV__SIGLEC1|p.G1155Wfs*82|1|0.4|ENSG00000088827|chr20:3693493-3693494|-/G|frameshift_variant;REV__SIGLEC1|p.N1048Qfs*15|1|0.39|ENSG00000088827|chr20:3694336-3694337|-/T|frameshift_variant	50.0245360154114	0.5941082100236891	6				NaN	NaN	0	NaN	3109	2652	5756
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5781	18.973	NaN	33279	30	0	10339	0.214	+			16439	HESGHAIIA	9	71	467.74051858197714	NaN	0	467.74053955078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HESGHAIIA_	ENSG00000136758|ENST00000376016|YME1L1;nc|ENSG00000136758|Q96TA2-3|YME1L1;nc|ENSG00000136758|Q96TA2|YME1L1	76.84663266511073	0.08218905260741291	6				NaN	NaN	0	NaN	3124	2655	5780
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5782	18.977	NaN	26926	30	0	7293.6	0.106			+	45983	VATGAAIKG	9	56	394.2374619103433	786.4603708874866	2	394.23724365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VATGAAIKG_	REV__ENST00000321448.12_1_11:74648098-74660104:-|nuORF;REV__ENST00000530562.5_1_11:74648079-74660104:-|nuORF	96.19043198914106	0.047412499214244314	6				NaN	NaN	0	NaN	3125	2655	5780
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5783	18.979	NaN	4215.7	30	0	713.37	0.106	+			21425	KMVTLHRM	8	58	508.28042357241367	1014.5462942116274	2	508.28033447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KMVTLHRM_	ENSG00000103051|ENST00000323786|COG4;ENST00000562200.5_1_16:70543798-70557434:-|nuORF;nc|ENSG00000103051|Q9H9E3-2|COG4;nc|ENSG00000103051|Q9H9E3|COG4	44.116797842482775	0.6307669463330267	6				NaN	NaN	0	NaN	3126	2655	5780
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5784	18.981	NaN	13394	30	0	1473.9	0.106	+			19523	KAVNPGRSL	9	72	471.2799934492556	940.5454339653112	2	471.2798767089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KAVNPGRSL_	ENSG00000103429|ENST00000261658|BFAR;nc|ENSG00000103429|Q9NZS9-2|BFAR	118.74307786436346	0.02196067127630568	6				NaN	NaN	0	NaN	3127	2655	5780
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5785	18.982	NaN	23116	30	0	3206.5	0.106	+			34559	RVLEAIQKK	9	78	362.232875674395	1083.676797623385	3	362.2327880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RVLEAIQKK_	ENSG00000169375|ENST00000394947|SIN3A;SIN3A|p.G659Afs*26|1|0.14|ENSG00000169375|chr15:75396375-75396375|C/-|frameshift_variant	112.2953585152457	0.026655838328212944	6				NaN	NaN	0	NaN	3128	2655	5780
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5786	18.984	NaN	5425.8	30	0	1020.2	0.035				-1	 	0	71	499.30599594100966	996.5974389488193	2	499.30560302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3129	2655	5780
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5787	18.985	NaN	4111.7	30	0	944.56	0.139	+			12508	GEENGAHTI	9	57	464.21191079694387	926.4092686606878	2	464.21160888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GEENGAHTI_	ENSG00000177565|ENST00000457928|TBL1XR1	88.17693792209575	0.07000514020414955	6				NaN	NaN	0	NaN	3130	2655	5780
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5805	19.024	NaN	82424	30	0	27675	0.214			+	10210	ETGETSKAL	9	97	468.2380963460674	934.4616397589348	2	468.2386169433594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ETGETSKAL_	REV__ENSG00000197763|ENST00000524230|TXNRD3;REV__ENST00000524230.6_3_3:126326756-126373974:-|nuORF	82.24051045832904	0.08786059719216216	6				NaN	NaN	0	NaN	3145	2658	5804
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5806	19.028	NaN	48618	30	0	9877.3	0.106	+			44352	TSHLYTDGSHT	11	72	406.85003466310195	1217.5282745895058	3	406.85009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TSHLYTDGSHT_	ENAM|p.P908H|1|0.23|ENSG00000132464|chr4:70644149-70644149|C/A|missense_variant	32.81241826257853	0.645615689454792	6				NaN	NaN	0	NaN	3146	2658	5804
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5807	19.03	NaN	6023.6	30	0	1629.8	0.106				-1	LRSCVRLAG	9	49	344.5322835848509	NaN	0	344.197998046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LRSC(Carbamidomethyl (C))VRLAG_	ENSG00000059588|ENST00000040877|TARBP1;TARBP1|p.S411Hfs*12|1|0.06|ENSG00000059588|chr1:234467519-234467519|A/-|frameshift_variant	42.396135135203025	0.2590952873412954	6				NaN	NaN	0	NaN	3147	2658	5804
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5808	19.032	NaN	75768	30	0	31218	0.106	+			3983	ATATVSVGK	9	79	417.239910396478	832.4652678597561	2	417.2400817871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATATVSVGK_	ENSG00000261150|ENST00000615648|EPPK1;EPPK1|p.G2015Vfs*36|2|0.33|ENSG00000261150|chr8:143867210-143867210|C/-|frameshift_variant;EPPK1|p.Q829Rfs*8|1|0.05|ENSG00000261150|chr8:143870770-143870770|C/-|frameshift_variant;EPPK1|p.Y695Ifs*68|1|0.36|ENSG00000261150|chr8:143871171-143871172|-/T|frameshift_variant	129.42129120953632	0.01549634589885217	6				NaN	NaN	0	NaN	3148	2658	5804
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5809	19.033	NaN	5412.4	30	0	1249.7	0.106			+	26133	LSPRVENR	8	60	485.77452844535844	969.5345039575169	2	485.775146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSPRVENR_	REV__ENST00000496725.1_1_2:8967049-8967241:-|nuORF	42.396135135203025	0.6414440140393314	6				NaN	NaN	0	NaN	3149	2658	5804
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5810	19.035	NaN	4969.6	30	0	701.37	0.036				-1	 	0	62	528.7484645997773	1055.4823762663545	2	528.7489013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3150	2658	5804
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5811	19.036	NaN	4097.4	30	0	1057.7	0.139			+	9229	EGSSTKITK	9	62	475.7618584250971	949.5091639169942	2	475.7613830566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EGSSTKITK_	REV__ENSG00000074657|ENST00000591808|ZNF532;REV__ENSG00000166716|ENST00000560079|ZNF592;REV__ZNF532|p.T1272Lfs*8|1|0.46|ENSG00000074657|chr18:58984370-58984370|A/-|frameshift_variant;REV__ZNF532|p.Y656Lfs*14|1|0.07|ENSG00000074657|chr18:58920247-58920248|-/T|frameshift_variant	81.52500206392136	0.09095445986635249	6				NaN	NaN	0	NaN	3151	2658	5804
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5829	19.073	NaN	23182	30	0	6014.9	0.214				-1	TICIWMSMWDL	11	70	491.21850991451856	1470.6337003437557	3	491.2182922363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_TIC(Carbamidomethyl (C))IWMSM(Oxidation (M))WDL_	ENST00000536214.1_2_17:657286-657484:+|nuORF	18.531049691330335	0.7837198200183355	6				NaN	NaN	0	NaN	3166	2661	5828
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5830	19.076	NaN	16716	30	0	1488.5	0.106	+			5333	ATVNQVLA	8	83	408.234843642487	814.4551343517741	2	408.2347717285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATVNQVLA_	ENSG00000143870|ENST00000272227|PDIA6;nc|ENSG00000143870|Q15084-2|PDIA6;nc|ENSG00000143870|Q15084-3|PDIA6;nc|ENSG00000143870|Q15084-4|PDIA6;nc|ENSG00000143870|Q15084-5|PDIA6;PDIA6|p.Y316Ffs*2|1|0.07|ENSG00000143870|chr2:10788738-10788750|AACTTCCAGATAA/-|frameshift_variant	40.5726180659479	0.6527593143185008	6				NaN	NaN	0	NaN	3167	2661	5828
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5831	19.078	NaN	12362	30	0	2943.3	0.106	+			49169	VVMRDPASK	9	70	501.7736912509697	1001.5328295687394	2	501.7736511230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVMRDPASK_	ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1	90.60085204095205	0.06317133949006545	6				NaN	NaN	0	NaN	3168	2661	5828
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5832	19.08	NaN	3396.6	30	0	673.41	0.106	+			20406	KETGGVEKL	9	56	480.77156711889023	959.5285813045805	2	480.7715148925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KETGGVEKL_	ENSG00000164754|ENST00000297338|RAD21	117.81106730687013	0.02252488733980868	6				NaN	NaN	0	NaN	3169	2661	5828
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5833	19.082	NaN	4918.4	30	0	681.19	0.106	+			39980	STMKTYVSK	9	68	522.7737726478342	1043.5329923624683	2	522.774169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STMKTYVSK_	ENSG00000198919|ENST00000361582|DZIP3;ENST00000495008.5_1_3:108373019-108406879:+|nuORF	48.601550744091256	0.3193666407755445	6				NaN	NaN	0	NaN	3170	2661	5828
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5834	19.084	NaN	2817.3	30	0	1048.2	0.037				-1	LPPTCPRDE	9	39	362.1745629361183	1083.501859408555	3	362.174560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_LPPTC(Carbamidomethyl (C))PRDE_	nc|ENSG00000139865|Q86TZ1-2|TTC6	31.529811441608018	0.5085848003137583	6				NaN	NaN	0	NaN	3171	2661	5828
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5835	19.084	NaN	6318.6	30	0	1018.3	0.144			+	13945	GRYRATFPIAI	11	60	422.24475120071315	1263.7124242023394	3	422.2445373535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GRYRATFPIAI_	REV__DTHD1|p.L499*|1|0.18|ENSG00000197057|chr4:36308267-36308267|T/-|frameshift_variant;REV__DTHD1|p.Q264Hfs*6|1|0.15|ENSG00000197057|chr4:36290651-36290652|-/TT|frameshift_variant;REV__ENSG00000197057|ENST00000639862|DTHD1;REV__nc|ENSG00000197057|Q6ZMT9-2|DTHD1;REV__nc|ENSG00000197057|Q6ZMT9|DTHD1	25.125986553469783	0.7262400895305658	6				NaN	NaN	0	NaN	3172	2661	5828
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5853	19.122	NaN	82499	30	0	14059	0.214	+			49326	VVSEKQFSK	9	88	526.2926908871303	1050.5708288410606	2	526.2930908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVSEKQFSK_	ENSG00000163584|ENST00000295830|RPL22L1	185.32735939749918	0.0007612398116818154	6				NaN	NaN	0	NaN	3187	2664	5852
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5854	19.126	NaN	107700	30	0	26599	0.106	+			3835	ATAITVGTK	9	110	431.2556810258118	860.4968091184236	2	431.2554626464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATAITVGTK_	tr|U7SWR2|U7SWR2_FUSNUAutotransporterdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00953PE=4SV=1	95.81516180277367	0.04847050768394289	6				NaN	NaN	0	NaN	3188	2664	5852
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5855	19.128	NaN	45947	30	0	3090.1	0.106			+	-1	EIMCICKCNKV	11	92	466.5516618971336	1396.633156291601	3	466.5514221191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_EIMC(Carbamidomethyl (C))ICKC(Carbamidomethyl (C))NKV_	REV__ENST00000370008.3_1_1:109351794-109352007:+|nuORF	35.17822180527639	0.6208003396870814	6				NaN	NaN	0	NaN	3189	2664	5852
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5856	19.13	NaN	32126	30	0	5119	0.106			+	25964	LSINRQAEP	9	83	514.2803040562565	1026.5460551793128	2	514.2803344726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSINRQAEP_	REV__ENSG00000015520|ENST00000381160|NPC1L1;REV__nc|ENSG00000015520|Q9UHC9-2|NPC1L1;REV__nc|ENSG00000015520|Q9UHC9-3|NPC1L1;REV__nc|ENSG00000015520|Q9UHC9-4|NPC1L1;REV__nc|ENSG00000015520|Q9UHC9|NPC1L1;REV__NPC1L1|p.L475Sfs*35|2|0.12|ENSG00000015520|chr7:44538974-44538974|G/-|frameshift_variant	125.81401957644128	0.01768009863045738	6				NaN	NaN	0	NaN	3190	2664	5852
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5857	19.131	NaN	11397	30	0	2213	0.106	+			9557	ELETVVVTGK	10	80	537.8062951138722	1073.5980372945444	2	537.8065795898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ELETVVVTGK_	ZBTB11|p.E991K|1|0.05|ENSG00000066422|chr3:101651357-101651357|C/T|missense_variant	72.87924865735499	0.25379688738724415	6				NaN	NaN	0	NaN	3191	2664	5852
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5858	19.133	NaN	12515	30	0	2404.3	0.033			+	45692	VAAGQGELK	9	68	436.7457451210316	871.4769373088632	2	436.7453918457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VAAGQGELK_	REV__ENST00000512894.5_3_3:134205095-134225968:+|nuORF;REV__ENST00000513612.6_1_3:134205095-134225968:+|nuORF	84.9155231211612	0.07920012719736333	6				NaN	NaN	0	NaN	3192	2664	5852
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5859	19.134	NaN	4073.4	30	0	364.64	0.144			+	-1	KMKMVVLNMQ	10	67	413.2205301540294	1236.6397610622882	3	413.2203063964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_KMKMVVLNM(Oxidation (M))Q_	REV__ENST00000515770.1_3_6:18244815-18249976:-|nuORF	40.05817265558897	0.5486090488315611	6				NaN	NaN	0	NaN	3193	2664	5852
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5877	19.172	NaN	16855	30	0	1780.1	0.214	+			45901	VAQGASKAL	9	66	422.74811964890404	843.4816863646081	2	422.74798583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VAQGASKAL_	ENSG00000275395|ENST00000616721|FCGBP;nc|ENSG00000275395|Q9Y6R7|FCGBP	82.7504851949679	0.08565546331141553	6				NaN	NaN	0	NaN	3208	2667	5876
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5878	19.176	NaN	13986	30	0	2009.4	0.106	+			29908	PLPRSVAPRQ	10	63	374.2243422155919	NaN	0	374.224365234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PLPRSVAPRQ_	ENSG00000125449|ENST00000245543|ARMC7;ENST00000579096.1_1_17:73110716-73125130:+|nuORF	41.42661286455405	0.3598046802465243	6				NaN	NaN	0	NaN	3209	2667	5876
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5879	19.178	NaN	13561	30	0	1940.2	0.106			+	31228	QGWRSGPTKG	10	76	537.2781684746344	1072.5417840160687	2	537.2786254882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QGWRSGPTKG_	REV__ENST00000413282.6_1_1:156552045-156554937:+|nuORF;REV__ENST00000495690.6_1_1:156552093-156554937:+|nuORF	88.17693792209575	0.14151128060301246	6				NaN	NaN	0	NaN	3210	2667	5876
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5880	19.18	NaN	16989	30	0	2494.5	0.106	+			38780	SSMKDLAQK	9	80	504.26293468909876	1006.5113164449975	2	504.26318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSMKDLAQK_	ENSG00000129003|ENST00000644861|VPS13C;nc|ENSG00000129003|Q709C8-2|VPS13C;nc|ENSG00000129003|Q709C8-3|VPS13C;nc|ENSG00000129003|Q709C8-4|VPS13C;VPS13C|p.E2463Nfs*18|1|0.25|ENSG00000129003|chr15:61920157-61920157|C/-|frameshift_variant;VPS13C|p.N3163Sfs*6|1|0.05|ENSG00000129003|chr15:61882732-61882733|-/TTATCATCAC|frameshift_variant;VPS13C|p.P3597Lfs*3|1|0.26|ENSG00000129003|chr15:61868732-61868732|G/-|frameshift_variant	85.86182877749512	0.07653218437724067	6				NaN	NaN	0	NaN	3211	2667	5876
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5881	19.182	NaN	10243	30	0	5759.3	0.106	+			25648	LQTLQGPKQ	9	49	338.1977911939705	1011.5715441821114	3	338.19775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LQTLQGPKQ_	FBXW7|p.N621Kfs*23|1|0.21|ENSG00000109670|chr4:152323142-152323143|-/T|frameshift_variant	34.172542307311794	0.4838870758800184	6				NaN	NaN	0	NaN	3212	2667	5876
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5882	19.183	NaN	3494.7	30	0	1065.3	0.036			+	29498	PDAAKRLPPR	10	55	560.8328794643875	1119.6512059955749	2	560.83349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PDAAKRLPPR_	REV__ENST00000521391.1_1_5:167891940-167899269:+|nuORF	53.08895987439943	0.42869529153390606	6				NaN	NaN	0	NaN	3213	2667	5876
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5883	19.184	NaN	7600.4	30	0	761.28	0.14	+			41629	SVQRPGLAR	9	71	492.29102301132673	982.5674930894535	2	492.2908630371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVQRPGLAR_	ENSG00000102901|ENST00000562787|CENPT;ENST00000562513.6_1_16:67862078-67865741:-|nuORF;ENST00000562947.5_1_16:67864542-67866179:-|nuORF;ENST00000565157.5_1_16:67864257-67867798:-|nuORF;ENST00000569862.5_1_16:67865068-67866179:-|nuORF;nc|ENSG00000102901|Q96BT3-2|CENPT	54.722347961057174	0.257609425301511	6				NaN	NaN	0	NaN	3214	2667	5876
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5901	19.222	NaN	23319	30	0	6472.2	0.214	+			22513	KTQAISISK	9	82	488.29527244727484	974.5759919613497	2	488.29510498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTQAISISK_	ENSG00000130787|ENST00000253083|HIP1R;ENST00000452196.6_1_12:123320097-123341792:+|nuORF;HIP1R|p.A781Pfs*24|1|0.19|ENSG00000130787|chr12:122859467-122859467|G/-|frameshift_variant;HIP1R|p.E1021Vfs*2|1|0.32|ENSG00000130787|chr12:122861412-122861445|AGAGGAGGTGGCCATCCGGCCCAGCACTGCCCCC/-|frameshift_variant;HIP1R|p.N345Mfs*4|3|0.29|ENSG00000130787|chr12:122855584-122855584|C/-|frameshift_variant;nc|ENSG00000130787|O75146-2|HIP1R	150.81021883065287	0.006680279908938716	6				NaN	NaN	0	NaN	3229	2670	5900
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5902	19.225	NaN	89845	30	0	33766	0.106	+			19306	KAGEVFIHK	9	95	514.7981483440425	1027.5817437548849	2	514.7981567382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KAGEVFIHK_	ENSG00000147140|ENST00000276079|NONO;ENST00000486613.6_1_X:70504267-70513876:+|nuORF;ENST00000566277.2_1_16:69791529-69791679:-|nuORF;nc|ENSG00000147140|Q15233-2|NONO	159.33581866081465	0.004693099277440949	6				NaN	NaN	0	NaN	3230	2670	5900
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5903	19.227	NaN	17162	30	0	3223.1	0.106	+			20343	KERSGVSL	8	86	438.2508768200165	874.487200706833	2	438.25079345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KERSGVSL_	ENSG00000124575|ENST00000244534|H1-3;ENSG00000168298|ENST00000304218|H1-4;ENSG00000187837|ENST00000343677|H1-2	54.776311868738084	0.5534952410049249	6				NaN	NaN	0	NaN	3231	2670	5900
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5904	19.229	NaN	18239	30	0	1650.4	0.106	+			16527	HEVKEAQTL	9	84	527.7803219355507	1053.5460909379012	2	527.7807006835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HEVKEAQTL_	ENSG00000127603|ENST00000564288|MACF1;MACF1|p.A5223Lfs*8|1|0.21|ENSG00000127603|chr1:39388486-39388486|G/-|frameshift_variant;MACF1|p.N4824Kfs*19|1|0.33|ENSG00000127603|chr1:39387292-39387293|-/A|frameshift_variant;MACF1|p.T4896Lfs*29|1|0.27|ENSG00000127603|chr1:39387507-39387507|A/-|frameshift_variant;nc|ENSG00000127603|Q9UPN3-2|MACF1;nc|ENSG00000127603|Q9UPN3-3|MACF1;nc|ENSG00000127603|Q9UPN3-4|MACF1;nc|ENSG00000127603|Q9UPN3-5|MACF1;nc|ENSG00000127603|Q9UPN3|MACF1	101.25262130126117	0.03792372629710479	6				NaN	NaN	0	NaN	3232	2670	5900
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5905	19.231	NaN	3561.4	30	0	379.13	0.106	+			18196	IMISRQSNL	9	66	531.2922029467636	1060.5698529603271	2	531.2925415039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IMISRQSNL_	tr|U7STY0|U7STY0_FUSNU4-hydroxybutyryl-CoAdehydratase/vinylacetyl-CoA-Delta-isomeraseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01228PE=4SV=1	54.776311868738084	0.25715957988447635	6				NaN	NaN	0	NaN	3233	2670	5900
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5906	19.233	NaN	14702	30	0	1843.6	0.04			+	20259	KEMVRNLMVVG	11	70	431.23464243819444	1290.6820979147833	3	431.2347717285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_KEM(Oxidation (M))VRNLMVVG_	REV__ENSG00000196396|ENST00000371621|PTPN1;REV__PTPN1|p.G377Efs*27|2|0.27|ENSG00000196396|chr20:50581301-50581301|G/-|frameshift_variant	41.080066990542036	0.5431644350485484	6				NaN	NaN	0	NaN	3234	2670	5900
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5907	19.234	NaN	21787	30	0	4769	0.144	+			41399	SVMPKKSILKK	11	81	420.2685804176866	1257.78391185326	3	420.2685241699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVMPKKSILKK_	ENSG00000171467|ENST00000361428|ZNF318;nc|ENSG00000171467|Q5VUA4-2|ZNF318;ZNF318|p.A1247Lfs*13|1|0.36|ENSG00000171467|chr6:43340260-43340260|T/-|frameshift_variant;ZNF318|p.N708Tfs*6|1|0.34|ENSG00000171467|chr6:43355211-43355211|T/-|frameshift_variant;ZNF318|p.P785Lfs*37|1|0.23|ENSG00000171467|chr6:43354980-43354980|G/-|frameshift_variant;ZNF318|p.S508Pfs*4|1|0.19|ENSG00000171467|chr6:43355812-43355812|A/-|frameshift_variant;ZNF318|p.T1649Lfs*8|1|0.04|ENSG00000171467|chr6:43339053-43339054|-/GACACTAG|frameshift_variant;ZNF318|p.T2157Qfs*54|1|0.39|ENSG00000171467|chr6:43337529-43337529|T/-|frameshift_variant	96.75553188499661	0.07111942461817355	6				NaN	NaN	0	NaN	3235	2670	5900
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5926	19.27	NaN	288830	30	0	118270	0.163	+			15494	GVALKVIHELA	11	86	383.9046558363208	1148.6921381091624	3	383.9043884277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVALKVIHELA_	ENSG00000077097|ENST00000264331|TOP2B;nc|ENSG00000077097|Q02880-2|TOP2B;TOP2B|p.K421*|1|0.35|ENSG00000077097|chr3:25632451-25632452|-/A|frameshift_variant;TOP2B|p.S1441Kfs*20|1|0.32|ENSG00000077097|chr3:25606099-25606100|-/T|frameshift_variant;TOP2B|p.S1441Vfs*41|4|0.13|ENSG00000077097|chr3:25606100-25606100|T/-|frameshift_variant;TOP2B|p.S1476Ffs*11|2|0.3|ENSG00000077097|chr3:25604822-25604823|-/A|frameshift_variant	56.72105179125745	0.35272424613657194	6				NaN	NaN	0	NaN	3251	2673	5925
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5927	19.273	NaN	10885	30	0	3286.7	0.106	+			22630	KTVIEPLKK	9	68	352.56566228733163	1054.6751574621949	3	352.5655822753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTVIEPLKK_	ENSG00000147439|ENST00000276416|BIN3;nc|ENSG00000147439|Q9NQY0-2|BIN3	117.5257442709337	0.022697614825424036	6				NaN	NaN	0	NaN	3252	2673	5925
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5928	19.275	NaN	6400.6	30	0	3264.6	0.106			+	-1	SAVEQSYECI	10	41	395.84010927897873	1184.4984984371363	3	395.840087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SAVEQSYEC(Carbamidomethyl (C))I_	REV__ENSG00000133704|ENST00000256079|IPO8;REV__nc|ENSG00000133704|O15397-2|IPO8	27.047317107675042	0.6589519614906109	6				NaN	NaN	0	NaN	3253	2673	5925
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5929	19.277	NaN	2677.6	30	0	522.3	0.106	+			27070	MAGAMSTTAK	10	58	484.73080526454527	967.4470575958906	2	484.73046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MAGAMSTTAK_	ENSG00000083937|ENST00000263780|CHMP2B;nc|ENSG00000083937|Q9UQN3-2|CHMP2B	51.19269402634007	0.44601001148513897	6				NaN	NaN	0	NaN	3254	2673	5925
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5930	19.279	NaN	2099.2	30	0	309.52	0.106				-1	TRKWCWNCMWI	11	55	533.9049072265625	NaN	0	533.9049072265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C),Oxidation (M)	_TRKWC(Carbamidomethyl (C))WNCM(Oxidation (M))WI_	ENST00000247225.6_1_14:64153135-64153216:-|nuORF	10.10389549528425	0.456735970842152	6				NaN	NaN	0	NaN	3255	2673	5925
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5931	19.28	NaN	11874	30	0	1163.2	0.106	+			23280	KYLGKNSK	8	65	469.27672110183323	936.5388892704665	2	469.2765197753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KYLGKNSK_	ENSG00000134588|ENST00000511190|USP26	45.9519527083369	0.6193794311207887	6				NaN	NaN	0	NaN	3256	2673	5925
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5932	19.282	NaN	3962.8	30	0	818.03	0.039	+			3984	ATATVSVGK	9	55	417.239910396478	832.4652678597561	2	417.23907470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATATVSVGK_	ENSG00000261150|ENST00000615648|EPPK1;EPPK1|p.G2015Vfs*36|2|0.33|ENSG00000261150|chr8:143867210-143867210|C/-|frameshift_variant;EPPK1|p.Q829Rfs*8|1|0.05|ENSG00000261150|chr8:143870770-143870770|C/-|frameshift_variant;EPPK1|p.Y695Ifs*68|1|0.36|ENSG00000261150|chr8:143871171-143871172|-/T|frameshift_variant	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	3257	2673	5925
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5951	19.32	NaN	34132	30	0	3609.4	0.214	+			16452	HESRQITQV	9	87	549.2889648874984	1096.5633768417968	2	549.2894897460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HESRQITQV_	ENSG00000104695|ENST00000221138|PPP2CB;ENSG00000113575|ENST00000481195|PPP2CA;ENSG00000119414|ENST00000373547|PPP6C;ENSG00000149923|ENST00000279387|PPP4C;ENST00000566749.5_1_16:30094185-30096380:+|nuORF;ENST00000567040.5_1_16:30087698-30094972:+|nuORF;nc|ENSG00000113575|P67775-2|PPP2CA;nc|ENSG00000119414|O00743-2|PPP6C;nc|ENSG00000119414|O00743-3|PPP6C	185.71840793949184	0.0007219834064317508	6				NaN	NaN	0	NaN	3273	2676	5950
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5952	19.323	NaN	8807.7	30	0	1695.9	0.106	+			22764	KVFAENKEIQK	11	85	445.2540474991179	1332.7403130975538	3	445.2538757324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVFAENKEIQK_	ENSG00000106541|ENST00000419304|AGR2	65.69465075029274	0.27262252711350304	6				NaN	NaN	0	NaN	3274	2676	5950
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5953	19.326	NaN	7576.6	30	0	1217.5	0.106	+			18740	ITIDKATGK	9	72	473.78218705484176	945.5498211764835	2	473.78192138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ITIDKATGK_	ENSG00000183207|ENST00000595090|RUVBL2;ENST00000594017.5_1_19:49497156-49513425:+|nuORF;ENST00000596247.5_1_19:49507512-49519096:+|nuORF;nc|ENSG00000183207|Q9Y230-2|RUVBL2	104.42354056486148	0.0346881550498418	6				NaN	NaN	0	NaN	3275	2676	5950
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5954	19.327	NaN	11757	30	0	2787.7	0.106			+	18653	ISVAFRRGSRL	11	63	421.2545700046936	1260.741880614281	3	421.25439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ISVAFRRGSRL_	REV__nc|ENSG00000205629|Q9UIC8-2|LCMT1	19.262678746197807	0.7802940895261122	6				NaN	NaN	0	NaN	3276	2676	5950
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5955	19.329	NaN	3641.7	30	0	637.44	0.106	+			138	AAGPSLSH	8	45	370.19034545208007	738.3661379709602	2	370.19024658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AAGPSLSH_	ENSG00000132383|ENST00000254719|RPA1;RPA1|p.N274Mfs*5|1|0.18|ENSG00000132383|chr17:1879272-1879272|A/-|frameshift_variant	97.47269410471826	0.25484828363392314	6				NaN	NaN	0	NaN	3277	2676	5950
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5956	19.331	NaN	3852	30	0	394.19	0.036	+			34487	RVDGPASNLK	10	71	528.7928776874776	1055.571202441755	2	528.7939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RVDGPASNLK_	COL6A3|p.A2956Lfs*45|1|0.33|ENSG00000163359|chr2:237336234-237336234|C/-|frameshift_variant;COL6A3|p.A2957Lfs*44|1|0.33|ENSG00000163359|chr2:237336232-237336232|A/-|frameshift_variant;COL6A3|p.G1770Vfs*12|1|0.05|ENSG00000163359|chr2:237366878-237366879|-/TGGTGTAA|frameshift_variant;COL6A3|p.G2207Efs*35|1|0.22|ENSG00000163359|chr2:237354908-237354908|G/-|frameshift_variant;COL6A3|p.G3016Vfs*19|1|0.34|ENSG00000163359|chr2:237334810-237334810|G/-|frameshift_variant;COL6A3|p.P2319Qfs*12|1|0.06|ENSG00000163359|chr2:237348359-237348359|G/-|frameshift_variant;COL6A3|p.V1771Sfs*8|3|0.08|ENSG00000163359|chr2:237366876-237366876|C/-|frameshift_variant;ENSG00000163359|ENST00000295550|COL6A3;nc|ENSG00000163359|P12111-2|COL6A3;nc|ENSG00000163359|P12111-3|COL6A3;nc|ENSG00000163359|P12111-4|COL6A3;nc|ENSG00000163359|P12111-5|COL6A3	58.2462437865262	0.38179041844353556	6				NaN	NaN	0	NaN	3278	2676	5950
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5957	19.332	NaN	5652.5	30	0	1725.5	0.139			+	32883	RDKMGLKLSVA	11	49	406.57273565181504	1216.696377555645	3	406.2371520996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RDKMGLKLSVA_	REV__tr|U7SJ75|U7SJ75_FUSNUMultidrugexportproteinMepAOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02134PE=3SV=1	20.31501182869353	0.7753667161465326	6				NaN	NaN	0	NaN	3279	2676	5950
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5975	19.371	NaN	163190	30	0	50542	0.214	+			35616	SCCPVGCAK	9	93	462.68965804045035	923.3647631477007	2	462.6904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SCC(Carbamidomethyl (C))PVGCAK_	CON__P67983;ENSG00000125144|ENST00000379811|MT1G;ENSG00000125148|ENST00000245185|MT2A;ENSG00000169688|ENST00000334346|MT1B;ENSG00000187193|ENST00000394485|MT1X;ENSG00000205364|ENST00000379818|MT1M;ENST00000330439.6_1_16:56660742-56660880:+|nuORF;ENST00000562017.1_1_16:56643131-56643263:+|nuORF;ENST00000563985.1_1_16:56642884-56643263:+|nuORF;ENST00000567300.1_1_16:56642646-56643263:+|nuORF;nc|ENSG00000125144|P13640-2|MT1G;nc|ENSG00000169715|P04732|MT1E	107.00750918261382	0.032051501805654005	6				NaN	NaN	0	NaN	3294	2679	5974
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5976	19.374	NaN	15339	30	0	5120.2	0.106	+			45165	TVMDKTRAL	9	64	525.7846457269922	1049.5547385207842	2	525.7850341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_TVM(Oxidation (M))DKTRAL_	CARD17-CASP1|1|fusion;CARD17-CASP1|2|fusion;CASP1|p.N205Ifs*7|1|0.4|ENSG00000137752|chr11:105030343-105030343|T/-|frameshift_variant;ENSG00000137752|ENST00000533400|CASP1;ENSG00000204397|ENST00000673097|CARD16;ENST00000526511.5_1_11:104901858-104905840:-|nuORF;ENST00000527065.1_1_11:104915107-104915377:-|nuORF;nc|ENSG00000137752|P29466-2|CASP1;nc|ENSG00000204397|Q5EG05|CARD16	82.7504851949679	0.08565546331141553	6				NaN	NaN	0	NaN	3295	2679	5974
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5977	19.377	NaN	6903.2	30	0	1513.3	0.106	+			930	AEIKVREA	8	65	458.2665889272915	NaN	0	458.2665710449219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEIKVREA_	ENSG00000049283|ENST00000268933|EPN3;ENSG00000063245|ENST00000270460|EPN1;ENSG00000072134|ENST00000314728|EPN2;ENSG00000176177|ENST00000325157|ENTHD1;ENST00000495155.5_1_17:19186396-19216987:+|nuORF;EPN1|p.G278Afs*164|1|0.5|ENSG00000063245|chr19:55691818-55691818|G/-|frameshift_variant;EPN1|p.P456Hfs*33|1|0.17|ENSG00000063245|chr19:55694823-55694823|C/-|frameshift_variant;EPN1|p.T467Pfs*22|1|0.36|ENSG00000063245|chr19:55694854-55694854|C/-|frameshift_variant;nc|ENSG00000049283|Q9H201-2|EPN3;nc|ENSG00000063245|Q9Y6I3-1|EPN1;nc|ENSG00000063245|Q9Y6I3-3|EPN1;nc|ENSG00000072134|O95208-2|EPN2	107.00750918261382	1.7418937515398478	6				NaN	NaN	0	NaN	3296	2679	5974
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5978	19.378	NaN	2528	30	0	330.97	0.106	+			44850	TTTKRTGIP	9	56	487.78506615761785	NaN	0	487.78515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TTTKRTGIP_	ENSG00000128487|ENST00000395527|SPECC1;nc|ENSG00000128487|Q5M775-2|SPECC1;nc|ENSG00000128487|Q5M775-3|SPECC1;nc|ENSG00000128487|Q5M775-4|SPECC1;nc|ENSG00000128487|Q5M775-5|SPECC1;SPECC1|p.N303Hfs*14|1|0.23|ENSG00000128487|chr17:20204950-20204951|AA/-|frameshift_variant;SPECC1|p.N303Tfs*63|7|0.29|ENSG00000128487|chr17:20204950-20204950|A/-|frameshift_variant;SPECC1|p.S120Gfs*29|1|0.36|ENSG00000128487|chr17:20204397-20204398|-/AG|frameshift_variant	56.72105179125745	0.16330365735109603	6				NaN	NaN	0	NaN	3297	2679	5974
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5979	19.38	NaN	2889.2	30	0	331.58	0.106	+			19989	KEIDTSTKV	9	60	510.7827313756388	1019.5509098180776	2	510.7827453613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEIDTSTKV_	ENSG00000139687|ENST00000267163|RB1;ENST00000525036.1_1_13:48877982-48934322:+|nuORF;RB1|p.L561Mfs*9|1|0.07|ENSG00000139687|chr13:48381428-48381432|CCTTG/-|frameshift_variant;RB1|p.V654Cfs*4|1|0.33|ENSG00000139687|chr13:48456343-48456343|A/-|frameshift_variant;RB1|p.Y529*|1|0.23|ENSG00000139687|chr13:48381334-48381335|AC/-|frameshift_variant;RB1|p.Y529Tfs*3|1|0.08|ENSG00000139687|chr13:48381329-48381329|T/-|frameshift_variant	68.62578634547417	0.14673074753754126	6				NaN	NaN	0	NaN	3298	2679	5974
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5980	19.382	NaN	1545.4	30	0	396	0.036			+	43525	TGTKFKIFS	9	36	343.52935791015625	NaN	0	343.52935791015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TGTKFKIFS_	REV__ZHX1|p.L775F|1|0.13|ENSG00000165156|chr8:123253624-123253624|G/A|missense_variant	25.57405402267927	0.3484490411150625	6				NaN	NaN	0	NaN	3299	2679	5974
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5981	19.383	NaN	12569	30	0	3068.9	0.144				-1	EYSKQMQRF	9	54	411.5291596185016	1231.5656494557047	3	411.52923583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_EYSKQM(Oxidation (M))QRF_	ENSG00000116478|ENST00000373548|HDAC1;ENSG00000196591|ENST00000519065|HDAC2;ENST00000463172.5_1_1:32757770-32792715:+|nuORF;ENST00000481281.5_1_1:32757770-32793222:+|nuORF;nc|ENSG00000196591|Q92769-3|HDAC2	31.529811441608018	0.5085848003137583	6				NaN	NaN	0	NaN	3300	2679	5974
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5999	19.418	NaN	6030.7	30	0	825.49	0.214	+			26146	LSQGGGKIK	9	57	444.2690618772239	886.5235708212479	2	444.26885986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSQGGGKIK_	ENSG00000184867|ENST00000356824|ARMCX2	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	3315	2682	5998
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6000	19.422	NaN	14258	30	0	3600.3	0.106	+			42981	TEKGTAINNAN	11	61	378.19134237118305	1131.5521977137491	3	378.19110107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEKGTAINNAN_	tr|U7SWR2|U7SWR2_FUSNUAutotransporterdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00953PE=4SV=1	43.650786325866115	0.5079891456189096	6				NaN	NaN	0	NaN	3316	2682	5998
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6001	19.424	NaN	7246	30	0	1150.4	0.106	+			523	ACSLEKLV	8	65	431.7372523030756	NaN	0	431.7347412109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ACSLEKLV_	ENST00000599510.1_1_19:49299609-49300643:-|nuORF	76.84663266511073	1.7418937515398478	6				NaN	NaN	0	NaN	3317	2682	5998
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6002	19.426	NaN	4498.8	30	0	380.21	0.106	+			30757	QDNRTVSKI	9	67	530.7906992731797	1059.5668456131593	2	530.7910766601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QDNRTVSKI_	CIC|p.A785Pfs*139|1|0.34|ENSG00000079432|chr19:42291117-42291117|G/-|frameshift_variant;CIC|p.E1288Gfs*56|1|0.3|ENSG00000079432|chr19:42293654-42293655|-/G|frameshift_variant;CIC|p.P1248Hfs*54|3|0.34|ENSG00000079432|chr19:42293224-42293224|C/-|frameshift_variant;CIC|p.P509Hfs*14|2|0.27|ENSG00000079432|chr19:42290289-42290289|C/-|frameshift_variant;CIC|p.P518Rfs*5|2|0.37|ENSG00000079432|chr19:42290317-42290317|C/-|frameshift_variant;CIC|p.T1217Nfs*6|1|0.23|ENSG00000079432|chr19:42293133-42293134|-/A|frameshift_variant;ENSG00000079432|ENST00000681038|CIC;nc|ENSG00000079432|Q96RK0-2|CIC	53.351449002276354	0.2690372970092375	6				NaN	NaN	0	NaN	3318	2682	5998
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6003	19.428	NaN	4568.7	30	0	423.28	0.106			+	21430	KNAAICCEA	9	68	490.2201186359242	978.4256843386485	2	490.2200012207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_KNAAIC(Carbamidomethyl (C))CEA_	REV__CNOT10|p.P680Lfs*33|1|0.34|ENSG00000182973|chr3:32769917-32769917|C/-|frameshift_variant;REV__ENSG00000182973|ENST00000328834|CNOT10;REV__nc|ENSG00000182973|Q9H9A5-2|CNOT10;REV__nc|ENSG00000182973|Q9H9A5-3|CNOT10;REV__nc|ENSG00000182973|Q9H9A5-4|CNOT10;REV__nc|ENSG00000182973|Q9H9A5-5|CNOT10;REV__nc|ENSG00000182973|Q9H9A5-6|CNOT10	73.97473282117947	0.12360187025703594	6				NaN	NaN	0	NaN	3319	2682	5998
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6004	19.429	NaN	4057	30	0	420.86	0.033	+			3540	ASSSVSISH	9	60	437.71694766192206	873.4193423906441	2	437.716552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASSSVSISH_	ENSG00000113368|ENST00000261366|LMNB1;ENST00000504788.5_1_5:126112928-126171953:+|nuORF	58.78195531508484	0.22376836668196862	6				NaN	NaN	0	NaN	3320	2682	5998
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6005	19.43	NaN	1129.9	30	0	122.13	0.141	+			23525	LAHVEGPHVAC	11	47	566.7835337199197	NaN	0	566.7835083007812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LAHVEGPHVAC_	ENSG00000198753|ENST00000361971|PLXNB3;nc|ENSG00000198753|Q9ULL4-2|PLXNB3;PLXNB3|p.G1176Afs*22|1|0.15|ENSG00000198753|chrX:153774191-153774191|G/-|frameshift_variant;PLXNB3|p.L1091Cfs*36|1|0.53|ENSG00000198753|chrX:153773699-153773699|G/-|frameshift_variant;PLXNB3|p.V1655Cfs*7|1|0.56|ENSG00000198753|chrX:153777236-153777236|G/-|frameshift_variant	20.030474535948922	0.456735970842152	6				NaN	NaN	0	NaN	3321	2682	5998
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6023	19.469	NaN	196370	30	0	67376	0.099	+			49170	VVMRDPASK	9	76	501.7736912509697	1001.5328295687394	2	501.7735595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVMRDPASK_	ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1	155.5846463517096	0.005567437401040498	6				NaN	NaN	0	NaN	3336	2685	6022
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6024	19.471	NaN	318730	30	0	39666	0.106	+			34584	RVMKALVNR	9	129	362.8901675400596	1085.648673220379	3	362.89013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RVMKALVNR_	ENSG00000149136|ENST00000278412|SSRP1;ENST00000293880.9_1_11:57098199-57100416:-|nuORF	96.0336014099291	0.047854655524928534	6				NaN	NaN	0	NaN	3337	2685	6022
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6025	19.473	NaN	57979	30	0	12621	0.106	+			4142	ATEQPLTAK	9	94	479.76370370451224	957.5128544758245	2	479.7632751464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATEQPLTAK_	ENSG00000120725|ENST00000394817|SIL1	186.41076107051632	0.0006524797715399015	6				NaN	NaN	0	NaN	3338	2685	6022
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6026	19.475	NaN	18215	30	0	6655.5	0.106	+			34585	RVMKALVNR	9	88	543.8317295833483	1085.6489062334965	2	543.8316650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RVMKALVNR_	ENSG00000149136|ENST00000278412|SSRP1;ENST00000293880.9_1_11:57098199-57100416:-|nuORF	172.24860141594272	0.002383092361811508	6				NaN	NaN	0	NaN	3339	2685	6022
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6027	19.477	NaN	6602.7	30	0	829.99	0.106			+	26065	LSLRKKEEA	9	53	358.54856099013807	1072.6238535706143	3	358.5484924316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSLRKKEEA_	REV__ENSG00000135241|ENST00000257694|PNPLA8;REV__nc|ENSG00000135241|Q9NP80-2|PNPLA8;REV__nc|ENSG00000135241|Q9NP80-3|PNPLA8;REV__PNPLA8|p.R507Qfs*27|1|0.05|ENSG00000135241|chr7:108496689-108496690|-/T|frameshift_variant;REV__PNPLA8|p.R507Tfs*8|1|0.05|ENSG00000135241|chr7:108496690-108496691|-/ATTATATAGGTAGT|frameshift_variant;REV__PNPLA8|p.T757Qfs*10|1|0.38|ENSG00000135241|chr7:108472481-108472481|T/-|frameshift_variant	54.722347961057174	0.257609425301511	6				NaN	NaN	0	NaN	3340	2685	6022
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6028	19.479	NaN	3156.8	30	0	621.38	0.106			+	29420	PCAQAVEQK	9	63	487.2416076660156	NaN	0	487.2416076660156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PCAQAVEQK_	REV__ENST00000544798.2_1_12:124408671-124428876:-|nuORF	42.396135135203025	0.2590952873412954	6				NaN	NaN	0	NaN	3341	2685	6022
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6029	19.48	NaN	12222	30	0	1417.5	0.034	+			987	AEKGKPVTL	9	69	471.7845355489583	941.5545181647166	2	471.783935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AEKGKPVTL_	ENSG00000106258|ENST00000222982|CYP3A5	96.0336014099291	0.047854655524928534	6				NaN	NaN	0	NaN	3342	2685	6022
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6030	19.481	NaN	2971.5	30	0	314.71	0.14	+			34604	RVNPSMVTK	9	67	516.2868402345975	1030.559127535995	2	516.286865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_RVNPSMVTK_	ENSG00000164961|ENST00000318410|WASHC5	65.46538089061403	0.16805504838372562	6				NaN	NaN	0	NaN	3343	2685	6022
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6049	19.517	NaN	53100	30	0	13352	0.214	+			5416	ATYHGSFSTK	10	91	549.76441725887	1097.51428158454	2	549.7647094726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATYHGSFSTK_	ENSG00000163359|ENST00000295550|COL6A3;ENST00000491769.1_1_2:238233419-238250825:-|nuORF;ENST00000493608.1_1_2:238242084-238243404:-|nuORF;nc|ENSG00000163359|P12111-2|COL6A3;nc|ENSG00000163359|P12111-4|COL6A3	131.08727773389177	0.013130408032639512	6				NaN	NaN	0	NaN	3359	2688	6048
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6050	19.521	NaN	15350	30	0	5673.8	0.106	+			49141	VVMAADRSLKK	11	71	406.57273565181504	1216.696377555645	3	406.57257080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVMAADRSLKK_	ENSG00000189241|ENST00000368608|TSPYL1	42.33807565288922	0.5259510355945483	6				NaN	NaN	0	NaN	3360	2688	6048
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6051	19.523	NaN	28112	30	0	5215	0.106	+			16493	HETSKMKVL	9	75	536.7943249025008	1071.5740968718014	2	536.7950439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HETSKMKVL_	ENSG00000067445|ENST00000173898|TRO;ENSG00000179222|ENST00000326587|MAGED1;ENST00000475183.1_1_X:54953428-54957230:+|nuORF;ENST00000492706.5_1_X:54953428-54957450:+|nuORF;ENST00000494718.5_1_X:51643260-51645023:+|nuORF;nc|ENSG00000067445|Q12816-2|TRO;nc|ENSG00000067445|Q12816-3|TRO;nc|ENSG00000067445|Q12816-4|TRO;nc|ENSG00000067445|Q12816-5|TRO;nc|ENSG00000179222|Q9Y5V3-2|MAGED1;TRO|p.S1034Rfs*10|1|0.07|ENSG00000067445|chrX:54929826-54929826|C/-|frameshift_variant	139.97047562133406	0.010493916756945389	6				NaN	NaN	0	NaN	3361	2688	6048
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6052	19.525	NaN	21811	30	0	3456.6	0.106	+			37373	SLFRASSAGKV	11	84	374.8804521208909	1121.6195269628727	3	374.88043212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLFRASSAGKV_	ENSG00000204616|ENST00000376734|TRIM31	42.86426827375447	0.5187511139693657	6				NaN	NaN	0	NaN	3362	2688	6048
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6053	19.527	NaN	22409	30	0	7299.5	0.106	+			49092	VVLEKAMHK	9	61	352.2072758215651	1053.5999980648953	3	352.2074279785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVLEKAMHK_	ENSG00000132669|ENST00000255006|RIN2;nc|ENSG00000132669|Q8WYP3-2|RIN2;RIN2|p.D879Gfs*3|1|0.16|ENSG00000132669|chr20:20000731-20000732|-/G|frameshift_variant	38.80614096846853	0.43426287593479557	6				NaN	NaN	0	NaN	3363	2688	6048
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6054	19.528	NaN	6971.2	30	0	937.33	0.046				-1	MRRRTCCWRCW	11	67	576.5912540516638	1726.7519327551913	3	576.591064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	3 Carbamidomethyl (C)	_MRRRTC(Carbamidomethyl (C))C(Carbamidomethyl (C))WRC(Carbamidomethyl (C))W_	ENST00000375224.1_1_1:19430583-19430625:-|nuORF	3.61906645146314	0.8634109586117306	6				NaN	NaN	0	NaN	3364	2688	6048
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6055	19.529	NaN	21717	30	0	3626	0.141	+			5014	ATSAVTVTR	9	64	453.2558260669412	904.4970992006824	2	453.25592041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATSAVTVTR_	ENSG00000123444|ENST00000430070|KBTBD4;nc|ENSG00000123444|Q9NVX7-1|KBTBD4;nc|ENSG00000123444|Q9NVX7-3|KBTBD4	154.1183686248401	0.005909203230691971	6				NaN	NaN	0	NaN	3365	2688	6048
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6073	19.568	NaN	14131	30	0	3862	0.214	+			41620	SVQLTEKRMDK	11	78	445.5747596941226	1333.7024496825677	3	445.574462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVQLTEKRMDK_	C3|p.A1045Pfs*26|1|0.09|ENSG00000125730|chr19:6694452-6694452|C/-|frameshift_variant;C3|p.S1008Rfs*8|3|0.41|ENSG00000125730|chr19:6694564-6694564|G/-|frameshift_variant;ENSG00000125730|ENST00000245907|C3	50.79123845855914	0.4102859592092987	6				NaN	NaN	0	NaN	3380	2691	6072
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6074	19.571	NaN	5295.3	30	0	896.27	0.106	+			22578	KTSSGFLAK	9	61	469.7685563889231	937.5225598446463	2	469.7685852050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTSSGFLAK_	ENSG00000039319|ENST00000505560|ZFYVE16	51.52775601994872	0.28504342437107444	6				NaN	NaN	0	NaN	3381	2691	6072
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6075	19.573	NaN	11486	30	0	3194.7	0.106			+	42438	TALLNGVP	8	74	392.73200531968024	783.4494577061605	2	392.73150634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TALLNGVP_	REV__ENST00000345046.10_1_X:152988698-152989941:-|nuORF;REV__ENST00000423827.5_3_X:152988695-152989460:-|nuORF;REV__ENST00000442093.5_3_X:152988698-152989661:-|nuORF	45.9519527083369	0.6193794311207887	6				NaN	NaN	0	NaN	3382	2691	6072
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6076	19.575	NaN	6253.5	30	0	3080.2	0.106	+			26449	LTGSQLLRI	9	39	334.20980638994365	999.6075897700309	3	334.2097473144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LTGSQLLRI_	ENSG00000198758|ENST00000361965|EPS8L3;nc|ENSG00000198758|Q8TE67-2|EPS8L3;nc|ENSG00000198758|Q8TE67-3|EPS8L3	26.69291269510374	0.5537881896960711	6				NaN	NaN	0	NaN	3383	2691	6072
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6077	19.577	NaN	15215	30	0	1438.5	0.106	+			34962	SAAKSLLNK	9	82	466.2827365086071	930.5509200840143	2	466.2818298339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SAAKSLLNK_	ENST00000474131.5_1_10:75577276-75601951:-|nuORF;ENST00000492020.5_1_10:75597207-75607060:-|nuORF;nc|ENSG00000058404|Q13554-3|CAMK2B;nc|ENSG00000058404|Q13554-4|CAMK2B;nc|ENSG00000058404|Q13554-5|CAMK2B;nc|ENSG00000148660|Q13555-10|CAMK2G;nc|ENSG00000148660|Q13555-2|CAMK2G;nc|ENSG00000148660|Q13555-3|CAMK2G;nc|ENSG00000148660|Q13555-4|CAMK2G;nc|ENSG00000148660|Q13555-7|CAMK2G;nc|ENSG00000148660|Q13555-8|CAMK2G;nc|ENSG00000148660|Q13555-9|CAMK2G;nc|ENSG00000148660|Q13555|CAMK2G	125.71293069911285	0.017741295328254008	6				NaN	NaN	0	NaN	3384	2691	6072
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6078	19.579	NaN	2291.6	30	0	288.62	0.036			+	-1	VLMLCLALGV	10	65	544.8140753732653	1087.6135978133304	2	544.8143920898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_VLMLC(Carbamidomethyl (C))LALGV_	REV__ENSG00000167191|ENST00000300571|GPRC5B;REV__nc|ENSG00000167191|Q9NZH0-2|GPRC5B	44.53106598305862	0.5073935772121767	6				NaN	NaN	0	NaN	3385	2691	6072
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6079	19.579	NaN	4255.6	30	0	487.86	0.14	+			38299	SQVPCFRVLV	10	58	402.2230200633653	NaN	0	402.221923828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_SQVPC(Carbamidomethyl (C))FRVLV_	ENSG00000145214|ENST00000273814|DGKQ	41.42661286455405	0.3598046802465243	6				NaN	NaN	0	NaN	3386	2691	6072
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6097	19.617	NaN	110920	30	0	37047	0.166	+			48915	VVDNGSGMCK	10	78	505.2255838277353	1008.4366147222706	2	505.2261962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVDNGSGMCK_	ACTBL2|p.R29Gfs*7|1|0.37|ENSG00000169067|chr5:57482623-57482623|G/-|frameshift_variant;ENSG00000075624|ENST00000646664|ACTB;ENSG00000169067|ENST00000423391|ACTBL2;ENST00000418351.1_1_15:44282253-44282364:-|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000477812.1_1_7:5569027-5569288:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF	156.16072019525166	0.007401655565974521	6				NaN	NaN	0	NaN	3401	2694	6096
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6098	19.62	NaN	50601	30	0	6724	0.106				-1	LASLNLAYDFC	11	101	429.5409074050593	1285.6008928153778	3	429.5403137207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LASLNLAYDFC(Carbamidomethyl (C))_	ENST00000464816.1_1_3:112729450-112730081:-|nuORF	36.31764250033197	0.6083289427130232	6				NaN	NaN	0	NaN	3402	2694	6096
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6099	19.622	NaN	13200	30	0	1464.5	0.106	+			49171	VVMRDPASK	9	80	501.7736912509697	1001.5328295687394	2	501.7819519042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVMRDPASK_	ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1	72.87924865735499	0.12833875048249987	6				NaN	NaN	0	NaN	3403	2694	6096
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6100	19.624	NaN	10867	30	0	6367.2	0.106	+			298	AAPGEARAM	9	59	437.2159637542744	872.4173745753488	2	437.2159118652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AAPGEARAM_	ENSG00000165238|ENST00000427277|WNK2;ENST00000467401.1_1_9:96070551-96082671:+|nuORF;nc|ENSG00000165238|Q9Y3S1-2|WNK2;nc|ENSG00000165238|Q9Y3S1-4|WNK2;nc|ENSG00000165238|Q9Y3S1|WNK2	52.936696900407355	0.27249468807391813	6				NaN	NaN	0	NaN	3404	2694	6096
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6101	19.625	NaN	8004.9	30	0	515.82	0.106			+	26924	LYFYRTMSLR	10	71	450.572694048587	1348.696252745961	3	450.57244873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LYFYRTMSLR_	REV__ENSG00000196954|ENST00000444739|CASP4;REV__ENST00000529565.1_1_11:104815482-104817977:-|nuORF;REV__nc|ENSG00000196954|P49662-2|CASP4;REV__nc|ENSG00000204403|Q6UXS9-3|CASP12;REV__nc|ENSG00000204403|Q6UXS9-5|CASP12;REV__nc|ENSG00000204403|Q6UXS9-7|CASP12;REV__nc|ENSG00000204403|Q6UXS9|CASP12	25.125986553469783	0.6746423231557295	6				NaN	NaN	0	NaN	3405	2694	6096
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6102	19.627	NaN	4734.4	30	0	341.76	0.106			+	-1	QKKMKVEI	8	68	510.29982972241504	NaN	0	510.2999572753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_QKKM(Oxidation (M))KVEI_	REV__nc|ENSG00000189195|Q5XKL5-4|BTBD8;REV__nc|ENSG00000189195|Q5XKL5|BTBD8	45.9519527083369	1.7418937515398478	6				NaN	NaN	0	NaN	3406	2694	6096
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6103	19.629	NaN	4532.3	30	0	2102	0.035	+			6090	AVNIVCHSK	9	37	324.1760525196063	969.506328159019	3	324.17626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AVNIVCHSK_	ENSG00000159352|ENST00000368884|PSMD4;ENST00000461434.1_1_1:151227258-151234901:+|nuORF;ENST00000462970.5_1_1:151227258-151237442:+|nuORF;nc|ENSG00000159352|P55036-2|PSMD4	60.11826168202944	0.21262886028301267	6				NaN	NaN	0	NaN	3407	2694	6096
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6121	19.667	NaN	27356	30	0	5478.4	0.214	+			38453	SSAPPLTGK	9	77	429.2399999291842	856.4654469251684	2	429.2395935058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSAPPLTGK_	ENSG00000100105|ENST00000266269|PATZ1;nc|ENSG00000100105|Q9HBE1-2|PATZ1;nc|ENSG00000100105|Q9HBE1-3|PATZ1;nc|ENSG00000100105|Q9HBE1-4|PATZ1;PATZ1|p.G285Pfs*14|1|0.11|ENSG00000100105|chr22:31344749-31344750|CC/-|frameshift_variant	80.45461616416974	0.09558281504443908	6				NaN	NaN	0	NaN	3422	2697	6120
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6122	19.67	NaN	24322	30	0	2224.7	0.106	+			42979	TEKGKDVEL	9	83	509.7742851355731	1017.5340173379462	2	509.77410888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEKGKDVEL_	nc|ENSG00000211714|A0A075B6L6|TRBV7-3;nc|ENSG00000282939|A0A1B0GXF2|TRBV7-2	101.25262130126117	0.03792372629710479	6				NaN	NaN	0	NaN	3423	2697	6120
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6123	19.672	NaN	1593.2	30	0	119.77	0.106	+			34274	RTKEKMSIK	9	47	374.2208232274146	1119.6406402824439	3	374.2204895019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RTKEKMSIK_	ENSG00000121570|ENST00000335658|DPPA4;ENST00000463966.5_1_3:109047772-109056364:-|nuORF	28.081489160057373	0.5408112046645406	6				NaN	NaN	0	NaN	3424	2697	6120
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6124	19.674	NaN	5708.2	30	0	1253.8	0.106	+			4699	ATLTGGPAR	9	61	422.23780953465234	842.4610661361047	2	422.23748779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATLTGGPAR_	ENSG00000055609|ENST00000262189|KMT2C;ENSG00000167548|ENST00000301067|KMT2D;KMT2C|p.I4868Lfs*37|1|0.28|ENSG00000055609|chr7:152138837-152138837|T/-|frameshift_variant;nc|ENSG00000055609|Q8NEZ4-2|KMT2C;nc|ENSG00000055609|Q8NEZ4-3|KMT2C;nc|ENSG00000167548|O14686-3|KMT2D	69.6276240434122	0.14239879520340665	6				NaN	NaN	0	NaN	3425	2697	6120
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6125	19.676	NaN	4226.7	30	0	826.1	0.106	+			1432	AEYGPQGRA	9	59	474.73046870113507	947.4463844690702	2	474.73004150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEYGPQGRA_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	3426	2697	6120
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6126	19.678	NaN	998.03	30	0	257.22	0.035			+	35442	SASGGAVL	8	31	331.17938232421875	NaN	0	331.17938232421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SASGGAVL_	REV__ENSG00000160785|ENST00000359511|SLC25A44	44.53106598305862	1.7418937515398478	6				NaN	NaN	0	NaN	3427	2697	6120
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6127	19.678	NaN	3394.5	30	0	382.1	0.139	+			45809	VAIGTAVTAAV	11	65	486.78988941192085	971.5652258906417	2	486.7895202636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VAIGTAVTAAV_	ENSG00000101425|ENST00000642449|BPI;nc|ENSG00000101425|P17213|BPI	49.44154591367651	0.42875387410569	6				NaN	NaN	0	NaN	3428	2697	6120
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6145	19.717	NaN	48511	30	0	14127	0.214	+			40419	STVGTSNLK	9	74	453.7481319346432	905.4817109360864	2	453.74798583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STVGTSNLK_	ENSG00000135111|ENST00000349155|TBX3;nc|ENSG00000135111|O15119-3|TBX3;nc|ENSG00000135111|O15119|TBX3;TBX3|p.K714Rfs*15|1|0.12|ENSG00000135111|chr12:114671931-114671932|TT/-|frameshift_variant;TBX3|p.S443Afs*194|1|1.0|ENSG00000135111|chr12:114674609-114674610|-/ATGGTGGCGGGGCT|frameshift_variant	150.36159442982594	0.006784847064083231	6				NaN	NaN	0	NaN	3443	2700	6144
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6146	19.72	NaN	12486	30	0	5428.9	0.106	+			5299	ATVKEQIVK	9	70	508.31089125079876	1014.6072295683975	2	508.310791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATVKEQIVK_	ENSG00000133103|ENST00000455146|COG6	112.2953585152457	0.026655838328212944	6				NaN	NaN	0	NaN	3444	2700	6144
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6147	19.722	NaN	9345.3	30	0	2386.3	0.106	+			35617	SCCPVGCAK	9	62	462.68965804045035	923.3647631477007	2	462.69012451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SCC(Carbamidomethyl (C))PVGCAK_	CON__P67983;ENSG00000125144|ENST00000379811|MT1G;ENSG00000125148|ENST00000245185|MT2A;ENSG00000169688|ENST00000334346|MT1B;ENSG00000187193|ENST00000394485|MT1X;ENSG00000205364|ENST00000379818|MT1M;ENST00000330439.6_1_16:56660742-56660880:+|nuORF;ENST00000562017.1_1_16:56643131-56643263:+|nuORF;ENST00000563985.1_1_16:56642884-56643263:+|nuORF;ENST00000567300.1_1_16:56642646-56643263:+|nuORF;nc|ENSG00000125144|P13640-2|MT1G;nc|ENSG00000169715|P04732|MT1E	104.74654710444128	0.034358562718640136	6				NaN	NaN	0	NaN	3445	2700	6144
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6148	19.724	NaN	5517.5	30	0	820.32	0.106			+	22884	KVLLSAATQ	9	66	465.784124319114	NaN	0	465.7842102050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KVLLSAATQ_	REV__CFAP69|p.I662V|1|0.37|ENSG00000105792|chr7:90299993-90299993|A/G|missense_variant	85.86182877749512	0.05129763505578642	6				NaN	NaN	0	NaN	3446	2700	6144
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6149	19.726	NaN	25007	30	0	5208.1	0.106	+			39523	STFRESFKK	9	70	377.20493214667215	1128.5929670402165	3	377.20477294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STFRESFKK_	ENSG00000067066|ENST00000340126|SP100;nc|ENSG00000067066|P23497-2|SP100;nc|ENSG00000067066|P23497-3|SP100;nc|ENSG00000067066|P23497-5|SP100;nc|ENSG00000067066|P23497-6|SP100;nc|ENSG00000067066|P23497-7|SP100;nc|ENSG00000067066|P23497|SP100	45.02220120713402	0.3613509778819777	6				NaN	NaN	0	NaN	3447	2700	6144
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6150	19.728	NaN	8283.8	30	0	4410	0.037				-1	SVMAAPCALAL	11	43	368.52430362292046	1102.5510814689615	3	368.5245056152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_SVMAAPC(Carbamidomethyl (C))ALAL_	ENSG00000156222|ENST00000394573|SLC28A1	24.231819034082204	0.7356191775841856	6				NaN	NaN	0	NaN	3448	2700	6144
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6151	19.728	NaN	6583.6	30	0	914.55	0.137	+			42	AAALNVAPV	9	59	413.24515808582584	824.4757632384517	2	413.244873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AAALNVAPV_	ENST00000269228.9_1_18:21112001-21112103:-|nuORF	31.954861631926434	0.5046124803899898	6				NaN	NaN	0	NaN	3449	2700	6144
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6169	19.767	NaN	45628	30	0	18897	0.214	+			48889	VVDENAVAK	9	71	472.75599286599737	943.4974327987948	2	472.7557373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVDENAVAK_	ADH1B|p.A318Lfs*29|1|0.06|ENSG00000196616|chr4:99311533-99311533|C/-|frameshift_variant;ENSG00000187758|ENST00000209668|ADH1A;ENSG00000196616|ENST00000305046|ADH1B;ENSG00000248144|ENST00000515683|ADH1C;nc|ENSG00000196616|P00325-2|ADH1B	159.27591364854348	0.004707062175358555	6				NaN	NaN	0	NaN	3464	2703	6168
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6170	19.771	NaN	12478	30	0	2003.6	0.106	+			4993	ATRTRLRRG	9	79	362.89200336255647	NaN	0	362.89434814453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATRTRLRRG_	ENST00000536642.5_1_11:64008530-64011025:+|nuORF	37.81151784470057	0.28666463014928195	6				NaN	NaN	0	NaN	3465	2703	6168
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6171	19.773	NaN	11122	30	0	926.62	0.106				-1	NSGMIDHK	8	67	459.2110407071808	916.4075284811616	2	459.2108154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_NSGM(Oxidation (M))IDHK_	ENSG00000198722|ENST00000635942|UNC13B	55.50420428727701	0.5462892107279674	6				NaN	NaN	0	NaN	3466	2703	6168
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6172	19.775	NaN	4169.5	30	0	766.46	0.106			+	18107	IKWSEAQST	9	62	525.2668251333633	1048.5190973335266	2	525.26708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IKWSEAQST_	REV__nc|ENSG00000142784|Q8N5D0-2|WDTC1;REV__nc|ENSG00000142784|Q8N5D0-6|WDTC1	52.936696900407355	0.27249468807391813	6				NaN	NaN	0	NaN	3467	2703	6168
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6173	19.776	NaN	1931.3	30	0	130.51	0.106			+	-1	WWMWRMFSSHR	11	59	547.9119559647414	1640.7140384944241	3	547.9119873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Oxidation (M)	_WWM(Oxidation (M))WRM(Oxidation (M))FSSHR_	REV__ENSG00000072042|ENST00000381346|RDH11;REV__ENST00000553582.5_1_14:68129224-68156858:-|nuORF;REV__ENST00000553816.5_1_14:68151682-68162420:-|nuORF;REV__ENST00000554493.1_1_14:68129224-68156947:-|nuORF;REV__nc|ENSG00000072042|Q8TC12-2|RDH11;REV__nc|ENSG00000072042|Q8TC12-3|RDH11	1.3219263287936662	0.8913871202961154	6				NaN	NaN	0	NaN	3468	2703	6168
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6174	19.778	NaN	5612.7	30	0	961.22	0.035			+	510	ACKCLSGSTI	10	71	520.2489163601313	1038.4832797870624	2	520.2492065429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_AC(Carbamidomethyl (C))KCLSGSTI_	REV__OLFML2B|p.S113L|1|0.2|ENSG00000162745|chr1:162020019-162020019|G/A|missense_variant	87.69643885390035	0.14426223466775756	6				NaN	NaN	0	NaN	3469	2703	6168
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6175	19.779	NaN	4153.2	30	0	564.17	0.14	+			16650	HIAEPNYGK	9	75	514.7618509994907	1027.5091490657812	2	514.7615356445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HIAEPNYGK_	ENSG00000167325|ENST00000300738|RRM1	65.46538089061403	0.16805504838372562	6				NaN	NaN	0	NaN	3470	2703	6168
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6193	19.818	NaN	35698	30	0	4991.9	0.214	+			32440	QVILGSPAR	9	85	470.78228555596917	939.5500181787384	2	470.7820129394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QVILGSPAR_	ENST00000573058.1_1_17:79225017-79225422:-|nuORF;nc|ENSG00000157637|Q9HBR0-2|SLC38A10	93.1432384553994	0.056003526918089595	6				NaN	NaN	0	NaN	3485	2706	6192
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6194	19.822	NaN	61731	30	0	26238	0.106	+			41766	SVSNMVHTAK	10	81	358.51839894215703	NaN	0	358.5183410644531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVSNMVHTAK_	ENSG00000115839|ENST00000264158|RAB3GAP1;nc|ENSG00000115839|Q15042-3|RAB3GAP1;nc|ENSG00000115839|Q15042-4|RAB3GAP1	61.76455937419982	0.21986853317854868	6				NaN	NaN	0	NaN	3486	2706	6192
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6195	19.824	NaN	16057	30	0	3838.6	0.106	+			12648	GEIKIHKM	8	68	478.27320185906757	954.5318507849352	2	478.2730712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEIKIHKM_	ENSG00000050405|ENST00000341247|LIMA1;ENST00000552045.1_1_12:50589526-50594661:-|nuORF;LIMA1|p.T536Lfs*38|2|0.4|ENSG00000050405|chr12:50177739-50177739|G/-|frameshift_variant;nc|ENSG00000050405|Q9UHB6-2|LIMA1;nc|ENSG00000050405|Q9UHB6-4|LIMA1;nc|ENSG00000050405|Q9UHB6-5|LIMA1	108.08749611321984	0.24621691167378246	6				NaN	NaN	0	NaN	3487	2706	6192
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6196	19.826	NaN	18769	30	0	6600.8	0.106	+			34686	RVSVVAEPK	9	73	492.79536788900845	983.5761828448169	2	492.7951354980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RVSVVAEPK_	ENST00000216799.8_1_14:24610479-24610756:-|nuORF;ENST00000560403.5_1_14:24610645-24610756:-|nuORF	99.01295224348159	0.040209060045561164	6				NaN	NaN	0	NaN	3488	2706	6192
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6197	19.827	NaN	18342	30	0	5937.5	0.106	+			16814	HPDKKIVAY	9	79	535.8033448859952	1069.5921368387903	2	535.8035278320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HPDKKIVAY_	ATXN10|p.F455Lfs*10|1|0.3|ENSG00000130638|chr22:45843115-45843115|T/-|frameshift_variant;ENSG00000130638|ENST00000252934|ATXN10;nc|ENSG00000130638|Q9UBB4-2|ATXN10	154.1183686248401	0.005909203230691971	6				NaN	NaN	0	NaN	3489	2706	6192
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6198	19.829	NaN	9241.2	30	0	2848.6	0.034	+			4322	ATGKVMVMK	9	66	482.7693925338676	963.5242321345352	2	482.769287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATGKVMVMK_	ENSG00000182541|ENST00000331728|LIMK2;LIMK2|p.G411Afs*3|1|0.4|ENSG00000182541|chr22:31267874-31267874|G/-|frameshift_variant;LIMK2|p.K351T|1|0.32|ENSG00000182541|chr22:31266994-31266994|A/C|missense_variant;nc|ENSG00000182541|P53671-2|LIMK2;nc|ENSG00000182541|P53671-3|LIMK2	93.1432384553994	0.056003526918089595	6				NaN	NaN	0	NaN	3490	2706	6192
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6199	19.83	NaN	7309.7	30	0	515.86	0.144	+			979	AEKELHEKF	9	66	377.53322388606745	1129.5778422584024	3	377.5329895019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AEKELHEKF_	ENSG00000125354|ENST00000394610|SEPTIN6;ENSG00000138758|ENST00000264893|SEPTIN11;ENST00000467310.1_1_X:118753883-118767379:-|nuORF;ENST00000481072.1_1_X:118763279-118767388:-|nuORF;ENST00000512575.5_1_4:77871042-77955662:+|nuORF;nc|ENSG00000125354|Q14141-4|SEPTIN6;nc|ENSG00000125354|Q14141|SEPTIN6;nc|ENSG00000138758|Q9NVA2-2|SEPTIN11	48.601550744091256	0.3193666407755445	6				NaN	NaN	0	NaN	3491	2706	6192
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6217	19.869	NaN	34890	30	0	5143.2	0.214	+			42922	TEIEKARAV	9	96	508.7904238677452	1015.5662948022904	2	508.79034423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEIEKARAV_	ENSG00000148843|ENST00000369797|PDCD11	173.39201167336012	0.002187917786942103	6				NaN	NaN	0	NaN	3506	2709	6216
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6218	19.873	NaN	7477.9	30	0	1988.1	0.106	+			14670	GTIEKSKLITK	11	72	406.5870995973495	1216.7394693922486	3	406.5867919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTIEKSKLITK_	ENSG00000144426|ENST00000683969|NBEAL1;NBEAL1|p.A1274Qfs*17|1|0.1|ENSG00000144426|chr2:203135766-203135766|A/-|frameshift_variant;NBEAL1|p.F1670Lfs*25|1|0.21|ENSG00000144426|chr2:203144843-203144843|T/-|frameshift_variant;NBEAL1|p.F2315Lfs*2|1|0.17|ENSG00000144426|chr2:203193900-203193900|T/-|frameshift_variant;NBEAL1|p.K2562Rfs*15|1|0.41|ENSG00000144426|chr2:203209306-203209306|A/-|frameshift_variant;NBEAL1|p.N2072Kfs*10|1|0.35|ENSG00000144426|chr2:203172825-203172826|-/A|frameshift_variant;NBEAL1|p.T1311Nfs*3|1|0.08|ENSG00000144426|chr2:203135875-203135876|-/A|frameshift_variant;nc|ENSG00000144426|Q6ZS30-1|NBEAL1;nc|ENSG00000144426|Q6ZS30|NBEAL1	61.418915157473144	0.31078935099726057	6				NaN	NaN	0	NaN	3507	2709	6216
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6219	19.875	NaN	5939.8	30	0	773.19	0.106	+			1736	AHMLTDNHL	9	72	526.2516204302924	1050.4886879273847	2	526.251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AHMLTDNHL_	ENSG00000104133|ENST00000261866|SPG11;nc|ENSG00000104133|Q96JI7-3|SPG11	97.47269410471826	0.04379738608259218	6				NaN	NaN	0	NaN	3508	2709	6216
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6220	19.877	NaN	15396	30	0	12076	0.106	+			9520	EKYIKGLVDSL	11	55	422.24214919930813	NaN	0	422.2420654296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EKYIKGLVDSL_	tr|U7STY8|U7STY8_FUSNUAAAdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01035PE=4SV=1	28.5767321226876	0.4380616241468488	6				NaN	NaN	0	NaN	3509	2709	6216
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6221	19.879	NaN	7448.9	30	0	652.82	0.106	+			20852	KILNGAGEP	9	72	449.75311510535613	897.4916772775123	2	449.7528381347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KILNGAGEP_	ENSG00000157087|ENST00000360273|ATP2B2;nc|ENSG00000157087|Q01814-2|ATP2B2;nc|ENSG00000157087|Q01814-3|ATP2B2;nc|ENSG00000157087|Q01814-4|ATP2B2;nc|ENSG00000157087|Q01814-5|ATP2B2;nc|ENSG00000157087|Q01814-6|ATP2B2;nc|ENSG00000157087|Q01814-7|ATP2B2;nc|ENSG00000157087|Q01814-8|ATP2B2	71.29570347882199	0.13518600952103718	6				NaN	NaN	0	NaN	3510	2709	6216
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6222	19.88	NaN	4225.4	30	0	1009.5	0.033	+			38623	SSGVPNPPK	9	52	441.7376921226501	881.4608313121003	2	441.73748779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSGVPNPPK_	ENSG00000115207|ENST00000264720|GTF3C2	52.936696900407355	0.27249468807391813	6				NaN	NaN	0	NaN	3511	2709	6216
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6223	19.881	NaN	5072.9	30	0	908.31	0.143			+	50440	YADLSKLFHI	10	56	402.88763041046565	1205.641061831597	3	402.88726806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YADLSKLFHI_	REV__AADACL3|p.Q198Kfs*14|6|0.23|ENSG00000188984|chr1:12725526-12725526|T/-|frameshift_variant;REV__ENSG00000188984|ENST00000359318|AADACL3	44.377184641726394	0.5088115166961078	6				NaN	NaN	0	NaN	3512	2709	6216
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6241	19.921	NaN	25245	30	0	4616.7	0.214	+			19775	KEAETRAEF	9	81	540.7697598361491	1079.524966739098	2	540.7701416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEAETRAEF_	CON__Q3SX28;ENSG00000140416|ENST00000403994|TPM1;ENSG00000143549|ENST00000651641|TPM3;ENSG00000167460|ENST00000643579|TPM4;ENSG00000198467|ENST00000645482|TPM2;ENST00000368528.3_1_3:27674554-27675208:+|nuORF;ENST00000397772.2_1_20:32500135-32500381:-|nuORF;ENST00000469717.5_1_1:154130117-154143232:-|nuORF;ENST00000520239.1_1_8:70042334-70042577:+|nuORF;ENST00000558264.5_1_15:63353458-63363368:+|nuORF;ENST00000559108.1_1_15:63354467-63358183:+|nuORF;nc|ENSG00000140416|P09493-10|TPM1;nc|ENSG00000140416|P09493-2|TPM1;nc|ENSG00000140416|P09493-3|TPM1;nc|ENSG00000140416|P09493-4|TPM1;nc|ENSG00000140416|P09493-5|TPM1;nc|ENSG00000140416|P09493-6|TPM1;nc|ENSG00000140416|P09493-7|TPM1;nc|ENSG00000140416|P09493-8|TPM1;nc|ENSG00000140416|P09493-9|TPM1;nc|ENSG00000143549|P06753-2|TPM3;nc|ENSG00000143549|P06753-3|TPM3;nc|ENSG00000143549|P06753-4|TPM3;nc|ENSG00000143549|P06753-5|TPM3;nc|ENSG00000143549|P06753-6|TPM3;nc|ENSG00000143549|P06753-7|TPM3;nc|ENSG00000167460|P67936-2|TPM4;nc|ENSG00000198467|P07951-2|TPM2;nc|ENSG00000198467|P07951-3|TPM2;TPM3|p.A243T|1|0.29|ENSG00000143549|chr1:154170448-154170448|C/T|missense_variant	168.25843898104137	0.0030641937004078144	6				NaN	NaN	0	NaN	3527	2712	6240
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6242	19.924	NaN	32357	30	0	8773.3	0.106			+	9986	ERKKRADRKM	10	109	445.25399398013394	1332.740152540602	3	445.25390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_ERKKRADRKM(Oxidation (M))_	REV__ENST00000452148.2_1_9:97321391-97329922:+|nuORF	46.45678178249821	0.4896490706773647	6				NaN	NaN	0	NaN	3528	2712	6240
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6243	19.926	NaN	3655.6	30	0	1223.9	0.106	+			15056	GTNSVICSK	9	49	454.728795454003	907.443037974806	2	454.7286071777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTNSVICSK_	ENSG00000102738|ENST00000323563|MRPS31	91.26522074875469	0.06129826844580791	6				NaN	NaN	0	NaN	3529	2712	6240
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6244	19.928	NaN	6276.5	30	0	1300.5	0.106	+			4338	ATGNTVVMK	9	68	460.74737500744317	919.4801970816864	2	460.7470397949219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATGNTVVMK_	ALDH1B1|p.L216Sfs*20|1|0.21|ENSG00000137124|chr9:38396389-38396389|C/-|frameshift_variant;ALDH1B1|p.V362Gfs*6|1|0.35|ENSG00000137124|chr9:38396832-38396833|GT/-|frameshift_variant;ENSG00000137124|ENST00000377698|ALDH1B1	126.24258497203832	0.01742065577488747	6				NaN	NaN	0	NaN	3530	2712	6240
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6245	19.93	NaN	4744.6	30	0	851.72	0.106	+			49087	VVLDKGSVK	9	58	472.7919892813134	NaN	0	472.7921142578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVLDKGSVK_	ENST00000540269.6_1_16:84778391-84778577:+|nuORF	82.7504851949679	0.061958946529908215	6				NaN	NaN	0	NaN	3531	2712	6240
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6246	19.932	NaN	3031.8	30	0	543.69	0.034	+			2692	AQNTVICSK	9	58	482.2499240234531	962.4852951137062	2	482.24981689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AQNTVICSK_	ENSG00000119888|ENST00000263735|EPCAM;ENST00000474691.1_1_2:47596644-47600714:+|nuORF	61.76455937419982	0.19890525308472518	6				NaN	NaN	0	NaN	3532	2712	6240
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6247	19.932	NaN	7163.3	30	0	1336.1	0.139	+			3356	ASNFKSPVK	9	73	489.27448482557304	976.5344167179461	2	489.27410888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASNFKSPVK_	ENSG00000204435|ENST00000375882|CSNK2B	104.42354056486148	0.0346881550498418	6				NaN	NaN	0	NaN	3533	2712	6240
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6265	19.971	NaN	48772	30	0	4625.6	0.214	+			12395	GEAAKSVKL	9	88	451.76892103190806	901.5232891306161	2	451.7687683105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEAAKSVKL_	ENSG00000189334|ENST00000344616|S100A14	101.45984612302182	0.0377122763612125	6				NaN	NaN	0	NaN	3548	2715	6264
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6266	19.975	NaN	31275	30	0	7190.9	0.106	+			44653	TTGAVLGQK	9	79	437.7533709732841	873.4921890133683	2	437.7530517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTGAVLGQK_	chr3:58640177-58645509|101|32.06|0.87|5.2|-|2|FAM3D,FAM3D|2;ENSG00000198643|ENST00000358781|FAM3D;FAM3D|p.G139Vfs*16|1|0.28|ENSG00000198643|chr3:58637183-58637183|C/-|frameshift_variant	171.38481719736927	0.0025305361306121837	6				NaN	NaN	0	NaN	3549	2715	6264
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6267	19.977	NaN	69680	30	0	52188	0.106			+	32316	QTRLIISHK	9	57	365.89256514403155	1094.6558660322946	3	365.892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QTRLIISHK_	REV__ENSG00000134775|ENST00000590592|FHOD3;REV__ENST00000589114.5_1_18:33877702-34289359:+|nuORF;REV__FHOD3|p.D280Rfs*29|1|0.35|ENSG00000134775|chr18:36611973-36611974|-/A|frameshift_variant;REV__FHOD3|p.E810Rfs*8|2|0.26|ENSG00000134775|chr18:36718298-36718298|G/-|frameshift_variant;REV__FHOD3|p.P335Qfs*63|1|0.19|ENSG00000134775|chr18:36625553-36625554|CC/-|frameshift_variant;REV__FHOD3|p.S336Vfs*138|7|0.27|ENSG00000134775|chr18:36625553-36625553|C/-|frameshift_variant;REV__nc|ENSG00000134775|Q2V2M9-2|FHOD3;REV__nc|ENSG00000134775|Q2V2M9-3|FHOD3;REV__nc|ENSG00000134775|Q2V2M9|FHOD3	47.91560031466742	0.327412564698279	6				NaN	NaN	0	NaN	3550	2715	6264
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6268	19.978	NaN	25254	30	0	9011.8	0.106	+			4967	ATQTSVVVK	9	60	466.7741734152954	931.5337938973909	2	466.77398681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATQTSVVVK_	ENSG00000158636|ENST00000695367|EMSY;ENST00000531641.1_1_11:76237526-76255878:+|nuORF;nc|ENSG00000158636|Q7Z589-2|EMSY;nc|ENSG00000158636|Q7Z589-4|EMSY;nc|ENSG00000158636|Q7Z589-5|EMSY;nc|ENSG00000158636|Q7Z589-6|EMSY;nc|ENSG00000158636|Q7Z589|EMSY	146.78539889680295	0.007618400906539062	6				NaN	NaN	0	NaN	3551	2715	6264
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6269	19.98	NaN	6306.5	30	0	2371.5	0.106			+	2128	ALIKERKIS	9	48	353.22912531080516	1056.6655465326155	3	353.2290954589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ALIKERKIS_	REV__ENSG00000170264|ENST00000404929|FAM161A;REV__FAM161A|p.L549Ifs*9|1|0.22|ENSG00000170264|chr2:61836048-61836049|-/T|frameshift_variant;REV__nc|ENSG00000170264|Q3B820-2|FAM161A;REV__nc|ENSG00000170264|Q3B820|FAM161A	39.252832667884924	0.4290233611298554	6				NaN	NaN	0	NaN	3552	2715	6264
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6270	19.982	NaN	6019.8	30	0	1241.2	0.035	+			47652	VSCPVGIKK	9	47	329.8600720884055	986.5583868654165	3	329.8599853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_VSC(Carbamidomethyl (C))PVGIKK_	ENSG00000175806|ENST00000317173|MSRA;nc|ENSG00000175806|Q9UJ68-2|MSRA;nc|ENSG00000175806|Q9UJ68-3|MSRA;nc|ENSG00000175806|Q9UJ68-4|MSRA;nc|ENSG00000175806|Q9UJ68-5|MSRA	47.657333605630114	0.33044192980041115	6				NaN	NaN	0	NaN	3553	2715	6264
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6271	19.983	NaN	18248	30	0	7518.4	0.137	+			49014	VVGPVGAGK	9	54	392.24006850576086	782.4655840783217	2	392.2397155761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VVGPVGAGK_	ABCC4|p.L883Wfs*7|2|0.22|ENSG00000125257|chr13:95083178-95083178|A/-|frameshift_variant;ABCC4|p.T775Rfs*21|1|0.09|ENSG00000125257|chr13:95161322-95161323|-/AGTATGTCTT|frameshift_variant;ABCC6|p.L780Wfs*31|1|0.44|ENSG00000091262|chr16:16178875-16178875|G/-|frameshift_variant;ENSG00000091262|ENST00000205557|ABCC6;ENSG00000125257|ENST00000645237|ABCC4;nc|ENSG00000091262|O95255-3|ABCC6;nc|ENSG00000125257|O15439-2|ABCC4;nc|ENSG00000125257|O15439-3|ABCC4;nc|ENSG00000125257|O15439-4|ABCC4	55.50420428727701	0.2510918378945873	6				NaN	NaN	0	NaN	3554	2715	6264
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6289	20.02	NaN	51141	30	0	26385	0.214	+			42521	TAPTGHTL	8	64	399.2114661507252	796.4083793682504	2	399.21112060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAPTGHTL_	ENSG00000198356|ENST00000357332|GET3	55.50420428727701	0.5462892107279674	6				NaN	NaN	0	NaN	3569	2718	6288
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6290	20.024	NaN	12085	30	0	2527.6	0.106	+			36209	SELPQDPQ	8	72	457.2166746225158	912.4187963118317	2	457.2164611816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SELPQDPQ_	PPP2R5C|p.H504Qfs*14|1|0.07|ENSG00000078304|chr14:101925207-101925208|-/A|frameshift_variant	79.45101966838831	0.3281480470254892	6				NaN	NaN	0	NaN	3570	2718	6288
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6291	20.026	NaN	15362	30	0	7227.7	0.106				-1	AACSQYFKK	9	72	368.18321917292974	1101.5278281189892	3	368.18304443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_AAC(Carbamidomethyl (C))SQYFKK_	ENSG00000178951|ENST00000322357|ZBTB7A	35.15202426646627	0.4747332964206883	6				NaN	NaN	0	NaN	3571	2718	6288
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6292	20.028	NaN	9441.6	30	0	1201.9	0.106			+	30731	QDKVRLNK	8	83	500.79868978671476	999.5828266402295	2	500.7983703613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QDKVRLNK_	REV__ENSG00000124126|ENST00000371941|PREX1;REV__ENST00000482556.5_1_20:47242425-47249020:-|nuORF;REV__nc|ENSG00000124126|Q8TCU6-2|PREX1	112.41091882917199	0.2438316832735406	6				NaN	NaN	0	NaN	3572	2718	6288
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6293	20.03	NaN	67912	30	0	34809	0.106	+			22200	KSTELLIRK	9	86	363.23267276312004	1086.67618888956	3	363.2325439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KSTELLIRK_	ENSG00000132475|ENST00000254810|H3-3B;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000168148|ENST00000366696|H3-4;ENSG00000183598|ENST00000331491|H3C13;ENSG00000188375|ENST00000340398|H3-5;ENSG00000197153|ENST00000359303|H3C12;ENSG00000197409|ENST00000356476|H3C4;ENSG00000203811|ENST00000369158|H3C14;ENSG00000203852|ENST00000403683|H3C15;ENSG00000273983|ENST00000614378|H3C8;ENSG00000274750|ENST00000614911|H3C6;ENSG00000275379|ENST00000616365|H3C11;ENSG00000275714|ENST00000613854|H3C1;ENSG00000277775|ENST00000618052|H3C7;ENSG00000278828|ENST00000685041|H3C10;ENST00000401004.2_1:120904811-120905087:+|nuORF;ENST00000586518.1_1_17:73774674-73775034:-|nuORF;nc|ENSG00000273213|Q5TEC6|H3-7	90.60085204095205	0.06317133949006545	6				NaN	NaN	0	NaN	3573	2718	6288
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6294	20.032	NaN	4144.7	30	0	527.72	0.034			+	20627	KGFSSNSQS	9	61	471.22017605471376	NaN	0	471.2203063964844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KGFSSNSQS_	REV__ENST00000369583.3_1_10:112270861-112271212:+|nuORF	44.116797842482775	0.2472372736944149	6				NaN	NaN	0	NaN	3574	2718	6288
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6295	20.032	NaN	13368	30	0	1525.3	0.141	+			15941	HAFESSQKY	9	75	548.7566153792673	1095.4986778253344	2	548.7564086914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HAFESSQKY_	ENSG00000100027|ENST00000339468|YPEL1;ENSG00000175155|ENST00000312655|YPEL2;ENST00000477675.1_1_22:22055420-22058252:-|nuORF;YPEL1|p.E102A|1|0.07|ENSG00000100027|chr22:21701184-21701184|T/G|missense_variant	158.07458414430337	0.004987072822166904	6				NaN	NaN	0	NaN	3575	2718	6288
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6313	20.07	NaN	70350	30	0	9941.2	0.213				-1	 	0	88	610.273324952981	1827.7981454591431	3	610.2735595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3590	2721	6312
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6314	20.074	NaN	8257.9	30	0	4667.8	0.106				-1	SKMSVKKAP	9	46	331.19146743185723	NaN	0	331.1914978027344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_SKM(Oxidation (M))SVKKAP_	ENSG00000173166|ENST00000319170|RAPH1	24.519189625965996	0.35377483217337163	6				NaN	NaN	0	NaN	3591	2721	6312
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6315	20.076	NaN	3188.6	30	0	601.57	0.106			+	38421	SSAGVQIVP	9	60	429.2399999291842	856.4654469251684	2	429.239990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSAGVQIVP_	REV__ENST00000564746.1_1_16:19078986-19083491:+|nuORF	68.78682469695295	0.14603441672067394	6				NaN	NaN	0	NaN	3592	2721	6312
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6316	20.078	NaN	3612.2	30	0	1495.8	0.106				-1	MSEADGLR	8	62	468.70803333359936	935.4015137339987	2	468.7079772949219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))M(Oxidation (M))SEADGLR_	APMAP|p.F346Lfs*9|1|0.19|ENSG00000101474|chr20:24968895-24968895|A/-|frameshift_variant;APMAP|p.P259Rfs*31|1|0.16|ENSG00000101474|chr20:24969598-24969598|G/-|frameshift_variant;ENSG00000101474|ENST00000217456|APMAP;nc|ENSG00000101474|Q9HDC9-2|APMAP	27.882242232435846	0.7440473649773525	6				NaN	NaN	0	NaN	3593	2721	6312
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6317	20.08	NaN	4141.9	30	0	1072	0.106	+			35618	SCCPVGCAK	9	62	462.68965804045035	923.3647631477007	2	462.6902160644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_SCC(Carbamidomethyl (C))PVGCAK_	CON__P67983;ENSG00000125144|ENST00000379811|MT1G;ENSG00000125148|ENST00000245185|MT2A;ENSG00000169688|ENST00000334346|MT1B;ENSG00000187193|ENST00000394485|MT1X;ENSG00000205364|ENST00000379818|MT1M;ENST00000330439.6_1_16:56660742-56660880:+|nuORF;ENST00000562017.1_1_16:56643131-56643263:+|nuORF;ENST00000563985.1_1_16:56642884-56643263:+|nuORF;ENST00000567300.1_1_16:56642646-56643263:+|nuORF;nc|ENSG00000125144|P13640-2|MT1G;nc|ENSG00000169715|P04732|MT1E	66.42927471994793	0.16001998865088202	6				NaN	NaN	0	NaN	3594	2721	6312
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6318	20.081	NaN	2639.7	30	0	955.24	0.037			+	16420	HESAESMLSH	10	55	564.2428553804971	1126.471157827794	2	564.2432861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HESAESMLSH_	REV__PKDREJ|p.P1468S|1|0.41|ENSG00000130943|chr22:46258921-46258921|G/A|missense_variant	49.44154591367651	0.46214596422418036	6				NaN	NaN	0	NaN	3595	2721	6312
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6319	20.082	NaN	1554.4	30	0	392.23	0.14	+			21453	KNFKSFQF	8	49	523.275230258207	1044.5359075832139	2	523.2754516601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KNFKSFQF_	ENST00000602402.5_1_13:96443355-96443493:+|nuORF	42.396135135203025	0.6414440140393314	6				NaN	NaN	0	NaN	3596	2721	6312
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6337	20.121	NaN	193020	30	0	58276	0.168	+			39605	STHGTFLNK	9	109	502.76185364664525	1003.5091543600905	2	502.7616271972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STHGTFLNK_	ENSG00000163798|ENST00000326019|SLC4A1AP;nc|ENSG00000163798|Q9BWU0-1|SLC4A1AP;SLC4A1AP|p.F378Lfs*8|1|0.18|ENSG00000163798|chr2:27667375-27667375|T/-|frameshift_variant;SLC4A1AP|p.L669Tfs*8|1|0.38|ENSG00000163798|chr2:27685159-27685160|-/A|frameshift_variant	141.52041321563706	0.009766778904176347	6				NaN	NaN	0	NaN	3611	2724	6336
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6338	20.124	NaN	113350	30	0	19555	0.106	+			39837	STLKSIMKK	9	124	345.8790772416436	1034.6154023251308	3	345.8791198730469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STLKSIMKK_	ENSG00000107104|ENST00000382297|KANK1;ENST00000354485.5_1_9:730997-731267:+|nuORF;ENST00000489369.5_1_9:676972-732786:+|nuORF;nc|ENSG00000107104|Q14678-2|KANK1	91.26522074875469	0.06129826844580791	6				NaN	NaN	0	NaN	3612	2724	6336
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6339	20.126	NaN	19881	30	0	6242.1	0.106			+	48690	VTTGPPPTGA	10	77	449.2373654658851	896.4601779985702	2	449.2371826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTTGPPPTGA_	REV__DCHS1|p.G2765Rfs*10|1|0.26|ENSG00000166341|chr11:6623383-6623384|-/T|frameshift_variant;REV__DCHS1|p.H2834Sfs*7|1|0.44|ENSG00000166341|chr11:6623177-6623178|-/C|frameshift_variant;REV__ENSG00000166341|ENST00000299441|DCHS1	87.75429964447693	0.1439309699732727	6				NaN	NaN	0	NaN	3613	2724	6336
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6340	20.128	NaN	14001	30	0	3162.2	0.106			+	25548	LPVGGPTVRKP	11	80	374.23287464733204	1119.6767945421961	3	374.23272705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LPVGGPTVRKP_	REV__ENST00000490470.5_1_3:133407133-133426371:+|nuORF	56.632244143249146	0.3535169766007185	6				NaN	NaN	0	NaN	3614	2724	6336
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6341	20.13	NaN	15143	30	0	2285.9	0.106			+	1647	AGPLAPKGP	9	75	404.2400113957012	806.4654698582024	2	404.2397155761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AGPLAPKGP_	REV__ENSG00000141858|ENST00000533683|SAMD1;REV__nc|ENSG00000141858|Q6SPF0|SAMD1	79.9392285194092	0.09781135437301468	6				NaN	NaN	0	NaN	3615	2724	6336
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6342	20.132	NaN	3785.5	30	0	290.57	0.106	+			6780	CFFVVAHVK	9	55	350.5246542963318	NaN	0	350.5246276855469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_CFFVVAHVK_	ENSG00000157111|ENST00000454765|TMEM171;nc|ENSG00000157111|Q8WVE6-2|TMEM171	49.44154591367651	0.21054156626303966	6				NaN	NaN	0	NaN	3616	2724	6336
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6343	20.133	NaN	8890.1	30	0	6118.9	0.035	+			24581	LGPHTLLNI	9	32	326.5308133623992	976.5706106873977	3	326.53082275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LGPHTLLNI_	ENST00000510175.5_1_4:155055-155787:+|nuORF	20.481830146152948	0.6112419832031293	6				NaN	NaN	0	NaN	3617	2724	6336
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6363	20.169	NaN	80457	30	0	16212	0.214	+			27636	MPQGGGQHY	9	105	487.71092162084113	973.4072903084823	2	487.7108459472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MPQGGGQHY_	ENSG00000141380|ENST00000415083|SS18;nc|ENSG00000141380|Q15532-2|SS18	143.01937276914788	0.00906355689373299	6				NaN	NaN	0	NaN	3634	2727	6362
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6364	20.173	NaN	15827	30	0	3627.5	0.106	+			42802	TEAPLNPK	8	68	435.24020845389646	868.4658639745929	2	435.23992919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEAPLNPK_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000403258.1_1_6:88986231-88986483:-|nuORF;ENST00000446382.2_1_9:6834760-6835018:+|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000502306.1_1_5:15450853-15451165:+|nuORF;ENST00000567299.1_1_19:9629420-9629708:+|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;nc|ENSG00000204434|Q9BYX7|POTEKP	79.45101966838831	0.3281480470254892	6				NaN	NaN	0	NaN	3635	2727	6362
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6365	20.175	NaN	53321	30	0	21964	0.106	+			3946	ATATELTTK	9	80	468.2556850239284	934.4968171146568	2	468.2555847167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATATELTTK_	ENSG00000133606|ENST00000255977|MKRN1;ENST00000475010.5_1_7:140155450-140179030:-|nuORF;nc|ENSG00000133606|Q9UHC7-2|MKRN1;nc|ENSG00000133606|Q9UHC7-3|MKRN1;nc|ENSG00000133606|Q9UHC7-4|MKRN1;nc|ENSG00000238222|Q13434|MKRN4P	199.70438780651162	3.456851077920069E-05	6				NaN	NaN	0	NaN	3636	2727	6362
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6366	20.177	NaN	4340.5	30	0	1361.6	0.106	+			5251	ATVDIVQKK	9	33	334.53785095816363	1000.591723474691	3	334.537841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATVDIVQKK_	AP4B1|p.C320Afs*21|1|0.35|ENSG00000134262|chr1:113900060-113900060|A/-|frameshift_variant;ENSG00000134262|ENST00000369569|AP4B1;ENST00000489499.5_1_1:114442984-114447339:-|nuORF;nc|ENSG00000134262|Q9Y6B7-2|AP4B1	21.9598887501803	0.5980208138527809	6				NaN	NaN	0	NaN	3637	2727	6362
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6367	20.178	NaN	8732.1	30	0	2755.6	0.106				-1	TGLISMTGSRL	11	45	384.541672058716	1150.6031867763481	3	384.54150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_TGLISM(Oxidation (M))TGSRL_	ENST00000514264.6_1_17:49242904-49243033:+|nuORF	34.08650109265054	0.6322515996262609	6				NaN	NaN	0	NaN	3638	2727	6362
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6368	20.18	NaN	2586.8	30	0	542.35	0.038	+			34619	RVPVEKPVYK	10	61	607.8664022455655	1213.718251557931	2	607.8665771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RVPVEKPVYK_	ENSG00000184428|ENST00000329245|TOP1MT;nc|ENSG00000184428|Q969P6-2|TOP1MT	57.148748479083515	0.39177200545522445	6				NaN	NaN	0	NaN	3639	2727	6362
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6369	20.181	NaN	3430	30	0	614.92	0.141	+			40972	SVGGSTALR	9	49	424.2351443600212	NaN	0	424.23516845703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVGGSTALR_	ENSG00000019102|ENST00000326621|VSIG2;nc|ENSG00000019102|Q96IQ7-2|VSIG2	47.657333605630114	0.2228375344433429	6				NaN	NaN	0	NaN	3640	2727	6362
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6387	20.219	NaN	15616	30	0	2601	0.214	+			38608	SSGPSTPLK	9	82	437.2373771049211	872.4602012766422	2	437.2373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSGPSTPLK_	C2CD5|p.D676Mfs*40|1|0.33|ENSG00000111731|chr12:22474769-22474769|T/-|frameshift_variant;C2CD5|p.F331Lfs*5|1|0.32|ENSG00000111731|chr12:22513345-22513345|C/-|frameshift_variant;ENSG00000111731|ENST00000446597|C2CD5;nc|ENSG00000111731|Q86YS7|C2CD5	96.0336014099291	0.047854655524928534	6				NaN	NaN	0	NaN	3655	2730	6386
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6388	20.223	NaN	13101	30	0	1344.7	0.106	+			34528	RVHEVFRVGK	10	74	409.57546452898634	1225.7045641871591	3	409.57537841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RVHEVFRVGK_	ENST00000393094.6_1_11:107879697-107879871:+|nuORF	66.9202029811203	0.3029018092171124	6				NaN	NaN	0	NaN	3656	2730	6386
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6389	20.225	NaN	4951.4	30	0	904.24	0.106	+			25925	LSGTVVKQG	9	60	444.7611401335481	887.5077273338962	2	444.7608947753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSGTVVKQG_	ENSG00000100558|ENST00000216446|PLEK2	44.116797842482775	0.37197099687881774	6				NaN	NaN	0	NaN	3657	2730	6386
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6390	20.227	NaN	7280.8	30	0	2194	0.106	+			35508	SATVVSAVQ	9	55	431.2373612889143	860.4601696446286	2	431.237060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SATVVSAVQ_	CON__Q6KB66-1;ENSG00000167767|ENST00000394815|KRT80;ENST00000466011.1_1_12:52565184-52579482:-|nuORF;nc|ENSG00000167767|Q6KB66-2|KRT80;nc|ENSG00000167767|Q6KB66-3|KRT80	56.72105179125745	0.24094814563026265	6				NaN	NaN	0	NaN	3658	2730	6386
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6391	20.228	NaN	4546.5	30	0	862.9	0.106			+	37193	SKAVEPAQV	9	64	464.75859389243044	927.5026348516609	2	464.7584228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SKAVEPAQV_	REV__ENSG00000157106|ENST00000446231|SMG1;REV__nc|ENSG00000157106|Q96Q15-2|SMG1;REV__nc|ENSG00000157106|Q96Q15-3|SMG1;REV__nc|ENSG00000157106|Q96Q15-4|SMG1;REV__SMG1|p.A3214Rfs*29|1|0.06|ENSG00000157106|chr16:18828132-18828133|-/ATTTTCT|frameshift_variant	38.753607047826485	0.4348790777924195	6				NaN	NaN	0	NaN	3659	2730	6386
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6392	20.23	NaN	1984	30	0	352.32	0.034	+			15765	GVSTNISTK	9	49	453.74814697715135	905.4817410211027	2	453.74774169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GVSTNISTK_	ENSG00000110713|ENST00000324932|NUP98;nc|ENSG00000110713|P52948-2|NUP98;nc|ENSG00000110713|P52948-3|NUP98;nc|ENSG00000110713|P52948-4|NUP98;nc|ENSG00000110713|P52948-6|NUP98;nc|ENSG00000110713|P52948|NUP98;NUP98|p.F410Lfs*77|1|0.19|ENSG00000110713|chr11:3753404-3753404|A/-|frameshift_variant;NUP98|p.N1328Tfs*89|2|0.22|ENSG00000110713|chr11:3699159-3699159|T/-|frameshift_variant	36.446750945000026	0.4619375763483977	6				NaN	NaN	0	NaN	3660	2730	6386
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6393	20.231	NaN	5122.9	30	0	1914.9	0.139				-1	GCCTSLMQ	8	58	478.68501669629745	955.3554804593949	2	478.6850280761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C)	_GC(Carbamidomethyl (C))C(Carbamidomethyl (C))TSLMQ_	ENSG00000127946|ENST00000336926|HIP1;nc|ENSG00000127946|O00291-4|HIP1	33.51558372728122	0.7005509609380386	6				NaN	NaN	0	NaN	3661	2730	6386
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6411	20.27	NaN	7599.7	30	0	2807.5	0.214	+			44972	TVCEKTVLK	9	63	359.8705780564693	1076.589904769608	3	359.8705139160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_TVC(Carbamidomethyl (C))EKTVLK_	ENSG00000198722|ENST00000635942|UNC13B;nc|ENSG00000198722|O14795-2|UNC13B;nc|ENSG00000198722|O14795|UNC13B	78.26377905018397	0.10505600812668463	6				NaN	NaN	0	NaN	3676	2733	6410
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6412	20.274	NaN	45120	30	0	5754.5	0.106	+			11295	FKLWPTKINQ	10	105	425.5796610916792	1273.7171538752377	3	425.5795593261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FKLWPTKINQ_	nc|ENSG00000152582|Q9C093-4|SPEF2	67.49366992349736	0.29779660154124327	6				NaN	NaN	0	NaN	3677	2733	6410
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6413	20.276	NaN	12838	30	0	3177.7	0.106	+			38624	SSGVPNPPK	9	62	441.7376921226501	881.4608313121003	2	441.7373352050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSGVPNPPK_	ENSG00000115207|ENST00000264720|GTF3C2	85.16082228582465	0.07850854922700509	6				NaN	NaN	0	NaN	3678	2733	6410
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6414	20.278	NaN	19373	30	0	4075.3	0.106			+	-1	LTSMMLNKL	9	73	356.1928457881523	1065.5567079646569	3	356.1926574707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_LTSM(Oxidation (M))MLNKL_	REV__ENSG00000198077|ENST00000301146|CYP2A7	42.396135135203025	0.392153681582562	6				NaN	NaN	0	NaN	3679	2733	6410
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6415	20.279	NaN	5789.6	30	0	1114.2	0.106	+			4040	ATDDYFRHK	9	58	384.8527911221018	1151.5365439665054	3	384.8525085449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATDDYFRHK_	ATP8B2|p.K587Efs*10|1|0.31|ENSG00000143515|chr1:154343465-154343466|-/G|frameshift_variant;ATP8B4|p.F281Lfs*4|1|0.41|ENSG00000104043|chr15:49979808-49979808|A/-|frameshift_variant;ATP8B4|p.K126Nfs*3|1|0.07|ENSG00000104043|chr15:50010902-50010902|T/-|frameshift_variant;ENSG00000104043|ENST00000284509|ATP8B4;ENSG00000143515|ENST00000368489|ATP8B2;ENST00000426445.1_1_1:154301436-154313374:+|nuORF;ENST00000558959.5_1_15:50271874-50336868:-|nuORF;nc|ENSG00000143515|P98198-2|ATP8B2;nc|ENSG00000143515|P98198-3|ATP8B2;nc|ENSG00000143515|P98198-4|ATP8B2;nc|ENSG00000143515|P98198|ATP8B2	39.252832667884924	0.4290233611298554	6				NaN	NaN	0	NaN	3680	2733	6410
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6416	20.281	NaN	7868.7	30	0	875.58	0.034	+			42471	TAMNGNLAK	9	71	460.2385998081462	918.4626466830924	2	460.2367858886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TAMNGNLAK_	ENSG00000184675|ENST00000374869|AMER1	76.7741389293348	0.11149722112137898	6				NaN	NaN	0	NaN	3681	2733	6410
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6417	20.282	NaN	3313.8	30	0	534.19	0.139	+			1785	AIFDKSTGK	9	68	483.7662612682689	965.5179696033379	2	483.7661437988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AIFDKSTGK_	ENSG00000178927|ENST00000306645|CYBC1;ENST00000582395.5_1_17:80403674-80408606:-|nuORF;ENST00000582608.5_1_17:80403674-80404562:-|nuORF;nc|ENSG00000178927|Q9BQA9-2|CYBC1	106.68306549817024	0.032382560583716295	6				NaN	NaN	0	NaN	3682	2733	6410
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6435	20.321	NaN	30014	30	0	4078.3	0.214	+			26322	LSVVNQLR	8	80	464.7822554110534	927.5499578889069	2	464.78204345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSVVNQLR_	ENSG00000104442|ENST00000276569|ARMC1;ENST00000523384.1_1_8:66525632-66539633:-|nuORF	106.41520541750704	0.2471395129373963	6				NaN	NaN	0	NaN	3697	2736	6434
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6436	20.325	NaN	28929	30	0	10537	0.106	+			16977	HPQQKVAVY	9	73	535.2931200933084	1068.5716872534167	2	535.2933349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HPQQKVAVY_	ENSG00000102871|ENST00000345057|TRADD;ENST00000566104.1_1_16:67189803-67193780:-|nuORF	153.03582135801034	0.006161527642367307	6				NaN	NaN	0	NaN	3698	2736	6434
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6437	20.327	NaN	21526	30	0	2811.5	0.106			+	41158	SVKGPSLSQ	9	83	451.75077782417026	901.4870027151405	2	451.7504577636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVKGPSLSQ_	REV__ENST00000464461.1_1_7:150413703-150416231:+|nuORF	83.6470233535746	0.08277643980271215	6				NaN	NaN	0	NaN	3699	2736	6434
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6438	20.329	NaN	5317.4	30	0	540.42	0.106				-1	YFMASEFRDQL	11	67	474.8835257067451	1421.6287477204353	3	474.8832092285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_YFM(Oxidation (M))ASEFRDQL_	ENSG00000078589|ENST00000171757|P2RY10;P2RY10|p.S321Vfs*7|1|0.05|ENSG00000078589|chrX:78961479-78961480|-/TGTAAAAAATA|frameshift_variant	21.0322348234405	0.7691802065814517	6				NaN	NaN	0	NaN	3700	2736	6434
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6439	20.331	NaN	15654	30	0	1116.7	0.106	+			16190	HEAQHGVTSL	10	77	539.767565415234	1077.520577897268	2	539.7680053710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HEAQHGVTSL_	ENSG00000100105|ENST00000266269|PATZ1;nc|ENSG00000100105|Q9HBE1-2|PATZ1;nc|ENSG00000100105|Q9HBE1-3|PATZ1;nc|ENSG00000100105|Q9HBE1-4|PATZ1	148.6902309647307	0.008728094565931875	6				NaN	NaN	0	NaN	3701	2736	6434
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6440	20.332	NaN	9624.2	30	0	820.7	0.035	+			39059	SSSQPIGVTK	10	75	502.274800824097	1002.535048714994	2	502.27447509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSSQPIGVTK_	ENSG00000274070|ENST00000616305|CASTOR2	104.06999374311218	0.06561005972557103	6				NaN	NaN	0	NaN	3702	2736	6434
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6441	20.333	NaN	12380	30	0	2588.3	0.139	+			3886	ATAQAVAPPR	10	61	491.27744798435106	980.5403430355021	2	491.2773132324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATAQAVAPPR_	ENST00000609438.1_1_4:90171359-90228902:-|nuORF	101.45984612302182	0.07336148045341315	6				NaN	NaN	0	NaN	3703	2736	6434
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6459	20.37	NaN	30234	30	0	4814.2	0.214	+			15353	GTVRIGVAK	9	87	450.7848392126523	899.5551254921046	2	450.7846984863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTVRIGVAK_	ENSG00000107186|ENST00000319217|MPDZ;ENST00000539508.5_1_9:13136054-13190160:-|nuORF;MPDZ|p.K1582Rfs*7|1|0.22|ENSG00000107186|chr9:13125278-13125278|T/-|frameshift_variant;nc|ENSG00000107186|O75970-2|MPDZ;nc|ENSG00000107186|O75970-3|MPDZ;nc|ENSG00000107186|O75970-5|MPDZ	109.47833844074708	0.029530294723441826	6				NaN	NaN	0	NaN	3718	2739	6458
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6460	20.374	NaN	14979	30	0	3914.8	0.106	+			34927	SAAGAAFTK	9	63	412.21915102131055	822.4237491094211	2	412.21893310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAAGAAFTK_	ENSG00000258315|ENST00000439424|C17orf49;ENST00000549857.1_1_17:6918176-6918548:+|nuORF;nc|ENSG00000258315|Q8IXM2-2|BAP18;nc|ENSG00000258315|Q8IXM2-3|BAP18	131.61620852596164	0.014413238321579053	6				NaN	NaN	0	NaN	3719	2739	6458
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6461	20.376	NaN	7545.6	30	0	2435.9	0.106				-1	LLYLMILCG	9	55	365.869702352323	1094.587277657169	3	365.8695983886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LLYLMILC(Carbamidomethyl (C))G_	ENSG00000180475|ENST00000316770|OR10Q1;OR10Q1|p.F35S|1|0.34|ENSG00000180475|chr11:58228772-58228772|A/G|missense_variant;OR10Q1|p.V189Sfs*19|1|0.41|ENSG00000180475|chr11:58228311-58228311|C/-|frameshift_variant	29.14955571784316	0.5308295550522326	6				NaN	NaN	0	NaN	3720	2739	6458
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6462	20.378	NaN	5975.1	30	0	991.12	0.106	+			23001	KVSEFVASK	9	64	497.78223628286526	993.5499196325305	2	497.7817077636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KVSEFVASK_	ABTB1|p.E252Sfs*102|1|0.29|ENSG00000114626|chr3:127677272-127677272|C/-|frameshift_variant;ABTB1|p.P318Qfs*36|2|0.4|ENSG00000114626|chr3:127677762-127677762|C/-|frameshift_variant;ENSG00000114626|ENST00000232744|ABTB1;nc|ENSG00000114626|Q969K4-2|ABTB1;nc|ENSG00000114626|Q969K4-3|ABTB1;nc|ENSG00000114626|Q969K4-4|ABTB1	99.78786539795823	0.03941834715970116	6				NaN	NaN	0	NaN	3721	2739	6458
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6463	20.38	NaN	3366.8	30	0	599.95	0.106			+	18148	ILMWLLSY	8	53	519.788010845701	1037.561468758202	2	519.7882080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ILMWLLSY_	REV__ENST00000514430.5_1_4:103592514-103595082:-|nuORF	40.5726180659479	0.6527593143185008	6				NaN	NaN	0	NaN	3722	2739	6458
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6464	20.382	NaN	15329	30	0	3834.4	0.038	+			18617	ISSLNENAAKR	11	54	401.5548719300967	1201.64278639049	3	401.5542297363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ISSLNENAAKR_	ENSG00000138193|ENST00000371380|PLCE1;nc|ENSG00000138193|Q9P212-2|PLCE1;PLCE1|p.E2087Gfs*37|1|0.1|ENSG00000138193|chr10:94316672-94316676|AGAAG/-|frameshift_variant	29.170058357718403	0.683821074385409	6				NaN	NaN	0	NaN	3723	2739	6458
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6465	20.382	NaN	6135.1	30	0	1007.5	0.139			+	-1	ISMDNRAL	8	68	468.23419650458345	934.4538400759669	2	468.2342529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_ISM(Oxidation (M))DNRAL_	REV__ENSG00000198520|ENST00000535358|ARMH1	55.50420428727701	0.5462892107279674	6				NaN	NaN	0	NaN	3724	2739	6458
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6483	20.421	NaN	78667	30	0	7833.3	0.17	+			27743	MQNMSIHTK	9	114	363.8440103762923	1088.510201729077	3	363.8442077636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MQNMSIHTK_	CON__H-INV:HIT000292931;CON__P05787;CON__REFSEQ:XP_092267;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	80.45461616416974	0.09558281504443908	6				NaN	NaN	0	NaN	3739	2742	6482
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6484	20.423	NaN	2106.6	30	0	329.61	0.106	+			17351	IAKGGAAL	8	36	350.72129396975646	699.4280350063129	2	350.7212219238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IAKGGAAL_	ENSG00000104413|ENST00000433389|ESRP1;ESRP1|p.L333Sfs*55|1|0.35|ENSG00000104413|chr8:94668009-94668009|G/-|frameshift_variant;ESRP1|p.N512Hfs*7|2|0.33|ENSG00000104413|chr8:94674383-94674384|AA/-|frameshift_variant;ESRP1|p.N512Kfs*8|1|0.48|ENSG00000104413|chr8:94674382-94674383|-/A|frameshift_variant;ESRP1|p.N512Tfs*2|2|0.36|ENSG00000104413|chr8:94674383-94674383|A/-|frameshift_variant;nc|ENSG00000104413|Q6NXG1-2|ESRP1;nc|ENSG00000104413|Q6NXG1-3|ESRP1;nc|ENSG00000104413|Q6NXG1-4|ESRP1;nc|ENSG00000104413|Q6NXG1-5|ESRP1	86.93460362436232	0.2867499496721195	6				NaN	NaN	0	NaN	3740	2742	6482
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6485	20.426	NaN	3946.6	30	0	832.28	0.106	+			18494	ISGTGKAL	8	47	373.7241239490246	745.4336949648492	2	373.7239685058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ISGTGKAL_	ENSG00000055044|ENST00000264279|NOP58	66.42927471994793	0.4381325844043345	6				NaN	NaN	0	NaN	3741	2742	6482
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6486	20.427	NaN	4330	30	0	469.2	0.106	+			12557	GEGKISKDL	9	70	473.7636391101329	NaN	0	473.7635803222656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEGKISKDL_	DDX60L|p.A1208Vfs*33|1|0.16|ENSG00000181381|chr4:168395993-168395994|-/CTTTGACA|frameshift_variant;DDX60L|p.F1291Lfs*11|1|0.38|ENSG00000181381|chr4:168391582-168391582|A/-|frameshift_variant;DDX60L|p.N1040Kfs*4|1|0.03|ENSG00000181381|chr4:168406043-168406044|-/AT|frameshift_variant;DDX60L|p.N1168Tfs*25|2|0.3|ENSG00000181381|chr4:168396113-168396113|T/-|frameshift_variant;DDX60L|p.N1642Mfs*9|1|0.2|ENSG00000181381|chr4:168371615-168371615|T/-|frameshift_variant;DDX60L|p.R1122Efs*29|1|0.05|ENSG00000181381|chr4:168400953-168400953|T/-|frameshift_variant;ENSG00000181381|ENST00000682922|DDX60L;nc|ENSG00000181381|Q5H9U9-2|DDX60L	61.691277971877994	0.14210560126578747	6				NaN	NaN	0	NaN	3742	2742	6482
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6487	20.429	NaN	5102	30	0	789.77	0.106	+			2550	AQAQPFGSK	9	71	467.24320746836565	932.4718620035313	2	467.2433166503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AQAQPFGSK_	ENSG00000115648|ENST00000264605|MLPH;ENST00000468178.5_1_2:238402069-238454213:+|nuORF;nc|ENSG00000115648|Q9BV36-2|MLPH;nc|ENSG00000115648|Q9BV36-3|MLPH;nc|ENSG00000115648|Q9BV36-4|MLPH;nc|ENSG00000115648|Q9BV36-5|MLPH	65.46538089061403	0.16805504838372562	6				NaN	NaN	0	NaN	3743	2742	6482
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6488	20.431	NaN	1643.5	30	0	196.2	0.106	+			42352	TAHIHATEY	9	59	521.7515321462137	1041.4885113592272	2	521.7517700195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TAHIHATEY_	ENSG00000122188|ENST00000442561|LAX1;nc|ENSG00000122188|Q8IWV1-2|LAX1;nc|ENSG00000122188|Q8IWV1-3|LAX1	58.78195531508484	0.22376836668196862	6				NaN	NaN	0	NaN	3744	2742	6482
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6489	20.433	NaN	6757.5	30	0	1945.3	0.038	+			35225	SALCPKFLHT	10	63	391.8744304915077	1172.6014620747233	3	391.8740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_SALC(Carbamidomethyl (C))PKFLHT_	ENSG00000159256|ENST00000400485|MORC3;ENST00000492336.5_1_21:37692562-37711220:+|nuORF	40.05817265558897	0.5486090488315611	6				NaN	NaN	0	NaN	3745	2742	6482
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6507	20.47	NaN	80467	30	0	21098	0.214	+			35284	SALTDKAIVKK	11	90	391.91170730483833	1172.713292514715	3	391.9114990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SALTDKAIVKK_	ENSG00000176485|ENST00000415826|PLAAT3;ENST00000394613.3_1_11:63342419-63381578:-|nuORF	89.56079334093651	0.10057263200875313	6				NaN	NaN	0	NaN	3760	2745	6506
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6508	20.474	NaN	16189	30	0	7047.2	0.106			+	35286	SALTMLGLCL	10	54	360.1928610592188	1077.5567537778563	3	360.19281005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SALTMLGLC(Carbamidomethyl (C))L_	REV__nc|ENSG00000180663|Q9BXE9|VN1R3	51.19269402634007	0.44601001148513897	6				NaN	NaN	0	NaN	3761	2745	6506
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6509	20.476	NaN	18013	30	0	2187.4	0.106	+			39256	STAMNGNLAK	10	93	503.75275141654015	1005.4909498998803	2	503.7530212402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STAMNGNLAK_	ENSG00000184675|ENST00000374869|AMER1	145.15565482312357	0.00937948146126426	6				NaN	NaN	0	NaN	3762	2745	6506
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6510	20.478	NaN	11941	30	0	1316.7	0.106	+			42644	TAVGSSTRY	9	69	471.23792221117924	940.4612914891585	2	471.2379150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TAVGSSTRY_	ENSG00000173120|ENST00000529006|KDM2A;ENST00000524657.1_1_11:67020024-67022523:+|nuORF;nc|ENSG00000173120|Q9Y2K7-2|KDM2A;nc|ENSG00000173120|Q9Y2K7-4|KDM2A;nc|ENSG00000173120|Q9Y2K7-5|KDM2A	96.0336014099291	0.047854655524928534	6				NaN	NaN	0	NaN	3763	2745	6506
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6511	20.48	NaN	3822.6	30	0	693.38	0.106			+	7171	DAGLLGGPGR	10	61	456.7482604980469	NaN	0	456.7482604980469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DAGLLGGPGR_	REV__ENST00000533880.1_1_11:86511647-86643773:+|nuORF	47.657333605630114	0.3204131577145918	6				NaN	NaN	0	NaN	3764	2745	6506
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6512	20.482	NaN	1469.1	30	0	148.21	0.036			+	8922	EEVLTEIEK	9	52	545.2895311342503	1088.5645093353005	2	545.2905883789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EEVLTEIEK_	REV__ENSG00000117385|ENST00000296388|P3H1;REV__ENST00000460031.5_1_1:43212370-43220777:-|nuORF;REV__nc|ENSG00000117385|Q32P28-3|P3H1;REV__nc|ENSG00000117385|Q32P28-4|P3H1	49.536043120802724	0.308405419312776	6				NaN	NaN	0	NaN	3765	2745	6506
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6513	20.482	NaN	5335.3	30	0	1809.8	0.146	+			13103	GGARAWAL	8	60	401.2219866390284	NaN	0	400.88751220703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GGARAWAL_	ENST00000577929.1_1_17:7477225-7477378:+|nuORF	26.79610172149135	1.7418937515398478	6				NaN	NaN	0	NaN	3766	2745	6506
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6531	20.522	NaN	24533	30	0	8334.9	0.214	+			5134	ATSSVSALK	9	69	432.2452442858107	862.4759356384214	2	432.24493408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSSVSALK_	ENSG00000177084|ENST00000320574|POLE;ENST00000539357.1_1_12:133257669-133263919:-|nuORF;POLE|p.A2030Pfs*18|1|0.14|ENSG00000177084|chr12:132632712-132632712|C/-|frameshift_variant;POLE|p.E396Sfs*16|1|0.1|ENSG00000177084|chr12:132675438-132675438|C/-|frameshift_variant;POLE|p.K1170Nfs*49|1|0.15|ENSG00000177084|chr12:132657208-132657208|T/-|frameshift_variant;POLE|p.K325Sfs*19|1|0.27|ENSG00000177084|chr12:132676142-132676142|G/-|frameshift_variant	109.47833844074708	0.029530294723441826	6				NaN	NaN	0	NaN	3781	2748	6530
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6532	20.525	NaN	28373	30	0	4427.5	0.106	+			14147	GSMRIFTKK	9	84	356.53912387697693	1066.5955422311308	3	356.53912353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSMRIFTKK_	ENSG00000168883|ENST00000323701|USP39;ENST00000459775.5_1_2:85848673-85875928:+|nuORF;ENST00000493829.5_1_2:85843459-85872221:+|nuORF;nc|ENSG00000168883|Q53GS9-2|USP39;nc|ENSG00000168883|Q53GS9-3|USP39	54.722347961057174	0.257609425301511	6				NaN	NaN	0	NaN	3782	2748	6530
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6533	20.527	NaN	10199	30	0	1019.6	0.106	+			34724	RVYGGLTTK	9	71	497.787891952047	993.561230970894	2	497.7709045410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RVYGGLTTK_	ENSG00000170248|ENST00000307296|PDCD6IP;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP	106.68306549817024	0.032382560583716295	6				NaN	NaN	0	NaN	3783	2748	6530
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6534	20.529	NaN	8147.1	30	0	891.08	0.106	+			27637	MPQGGGQHY	9	72	487.71092162084113	973.4072903084823	2	487.7106628417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MPQGGGQHY_	ENSG00000141380|ENST00000415083|SS18;nc|ENSG00000141380|Q15532-2|SS18	73.97473282117947	0.12360187025703594	6				NaN	NaN	0	NaN	3784	2748	6530
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6535	20.531	NaN	11194	30	0	2919.8	0.106			+	46105	VDEISEVVDT	10	70	553.267374602784	1104.520196272368	2	553.267822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VDEISEVVDT_	REV__tr|U7SYS6|U7SYS6_FUSNUtRNA(guanine-N(1)-)-methyltransferaseC-terminaldomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00919PE=4SV=1	49.44154591367651	0.46214596422418036	6				NaN	NaN	0	NaN	3785	2748	6530
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6536	20.533	NaN	1622.5	30	0	331.69	0.036				-1	LSLGQTLRC	9	46	349.8586549088205	1046.5541353266615	3	349.85858154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_LSLGQTLRC(Carbamidomethyl (C))_	ENST00000371811.4_1_10:91098714-91098768:+|nuORF	31.529811441608018	0.5085848003137583	6				NaN	NaN	0	NaN	3786	2748	6530
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6537	20.533	NaN	6697.4	30	0	858.1	0.139			+	35188	SAIQDHKM	8	67	465.22884611452236	928.4431392958447	2	465.2287292480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SAIQDHKM_	REV__ENSG00000135905|ENST00000258390|DOCK10;REV__nc|ENSG00000135905|Q96BY6-3|DOCK10	39.252832667884924	0.6609488554722044	6				NaN	NaN	0	NaN	3787	2748	6530
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6555	20.57	NaN	167330	30	0	32557	0.134	+			34725	RVYGGLTTK	9	110	497.787891952047	993.561230970894	2	497.7874755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVYGGLTTK_	ENSG00000170248|ENST00000307296|PDCD6IP;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP	120.8684288430529	0.02067403653475984	6				NaN	NaN	0	NaN	3802	2751	6554
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6556	20.572	NaN	89735	30	0	53373	0.106	+			6479	AVYLSTCKDSK	11	72	424.5480940943654	1270.6224528832963	3	424.5480651855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_AVYLSTC(Carbamidomethyl (C))KDSK_	ENSG00000231925|ENST00000434618|TAPBP;nc|ENSG00000231925|O15533-3|TAPBP;nc|ENSG00000231925|O15533-4|TAPBP	79.07001860377117	0.16012584326255155	6				NaN	NaN	0	NaN	3803	2751	6554
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6557	20.574	NaN	9891.1	30	0	2528.7	0.106	+			12748	GELAPLRT	8	53	428.7478558420642	855.4811587509284	2	428.747802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GELAPLRT_	CILP2|p.P1036Hfs*17|1|0.12|ENSG00000160161|chr19:19545647-19545647|C/-|frameshift_variant;ENSG00000160161|ENST00000291495|CILP2	60.97194046774394	0.49215940876911696	6				NaN	NaN	0	NaN	3804	2751	6554
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6558	20.576	NaN	5622.7	30	0	454.3	0.106	+			15984	HAKEENLSM	9	67	529.7506840881978	1057.4868152431955	2	529.7509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HAKEENLSM_	ENST00000558264.5_1_15:63353458-63363368:+|nuORF;nc|ENSG00000140416|P09493-2|TPM1;nc|ENSG00000140416|P09493-3|TPM1;nc|ENSG00000140416|P09493-7|TPM1;nc|ENSG00000140416|P09493-8|TPM1;nc|ENSG00000140416|P09493-9|TPM1	70.8162118820467	0.13725933411854815	6				NaN	NaN	0	NaN	3805	2751	6554
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6559	20.578	NaN	6890.6	30	0	1530.5	0.106	+			39853	STLNELVDYI	10	49	389.53679519152297	1165.5885561747689	3	389.5364685058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STLNELVDYI_	ENSG00000154001|ENST00000337537|PPP2R5E;nc|ENSG00000154001|Q16537-2|PPP2R5E;nc|ENSG00000154001|Q16537-3|PPP2R5E;PPP2R5E|p.K449Nfs*7|1|0.22|ENSG00000154001|chr14:63376066-63376066|T/-|frameshift_variant;PPP2R5E|p.T201Qfs*26|1|0.36|ENSG00000154001|chr14:63396665-63396665|T/-|frameshift_variant	40.05817265558897	0.5486090488315611	6				NaN	NaN	0	NaN	3806	2751	6554
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6560	20.579	NaN	30166	30	0	9245	0.106	+			15410	GTYGLDSVKKK	11	50	399.22769155273363	1194.6612452584009	3	399.2275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTYGLDSVKKK_	ENSG00000087338|ENST00000282570|GMCL1	35.17822180527639	0.6208003396870814	6				NaN	NaN	0	NaN	3807	2751	6554
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6561	20.581	NaN	5406.2	30	0	416.48	0.043			+	7563	DIEREWHAWDW	11	74	514.8973582228518	1541.6702452687555	3	514.8975219726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DIEREWHAWDW_	REV__NAGLU|p.R149H|1|0.42|ENSG00000108784|chr17:42537460-42537460|G/A|missense_variant	12.4328334004247	0.812273696271531	6				NaN	NaN	0	NaN	3808	2751	6554
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6579	20.619	NaN	35052	30	0	8580.8	0.214	+			38625	SSGVPNPPK	9	84	441.7376921226501	881.4608313121003	2	441.73736572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSGVPNPPK_	ENSG00000115207|ENST00000264720|GTF3C2	93.1432384553994	0.056003526918089595	6				NaN	NaN	0	NaN	3823	2754	6578
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6580	20.622	NaN	11748	30	0	1631.5	0.106	+			35452	SASPSVPGPT	10	69	450.22695712124744	898.4393613092949	2	450.2267761230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SASPSVPGPT_	ENSG00000118058|ENST00000534358|KMT2A;nc|ENSG00000118058|Q03164-2|KMT2A;nc|ENSG00000118058|Q03164|KMT2A	58.78195531508484	0.37691818691852547	6				NaN	NaN	0	NaN	3824	2754	6578
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6581	20.625	NaN	3837	30	0	300.64	0.106	+			16369	HENDVKTAL	9	60	513.7642846651538	1025.5140163971075	2	513.7642822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HENDVKTAL_	ENSG00000165533|ENST00000380656|TTC8;nc|ENSG00000165533|Q8TAM2-3|TTC8;TTC8|p.K269Rfs*38|1|0.08|ENSG00000165533|chr14:88857236-88857237|-/GGATGAATAG|frameshift_variant	63.53385203322761	0.18415635464017938	6				NaN	NaN	0	NaN	3825	2754	6578
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6582	20.626	NaN	7809.7	30	0	2500.7	0.106	+			16824	HPDRSQPAF	9	61	527.7567765199633	1053.4990001067265	2	527.7571411132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HPDRSQPAF_	ENSG00000213676|ENST00000375203|ATF6B;ENST00000494022.1_1_6:32065974-32085368:-|nuORF;nc|ENSG00000213676|Q99941-2|ATF6B	71.87747018426188	0.13267044672804276	6				NaN	NaN	0	NaN	3826	2754	6578
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6583	20.628	NaN	8157.8	30	0	2703.1	0.106	+			43902	TNGPLPDK	8	66	421.22440391769675	840.4342549021935	2	421.22412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TNGPLPDK_	ENSG00000142789|ENST00000290122|CELA3A;ENSG00000219073|ENST00000337107|CELA3B	70.8162118820467	0.40009732720503505	6				NaN	NaN	0	NaN	3827	2754	6578
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6584	20.63	NaN	7597.9	30	0	1724	0.034			+	17879	IGAPQSLVPG	10	64	469.7688600744335	937.5231672156671	2	469.7685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IGAPQSLVPG_	REV__ENSG00000141384|ENST00000269142|TAF4B;REV__ENST00000504528.2_1_4:113747508-113747850:+|nuORF;REV__nc|ENSG00000141384|Q92750-2|TAF4B	42.396135135203025	0.5270658956260207	6				NaN	NaN	0	NaN	3828	2754	6578
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6585	20.631	NaN	6676	30	0	2823.3	0.139				-1	NICVSCCT	8	60	478.68501669629745	955.3554804593949	2	478.6849670410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C)	_NIC(Carbamidomethyl (C))VSC(Carbamidomethyl (C))CT_	HERV1_I-int_dup2|chr3:34679996-34686397:+|1.0948245018220069|0.0565463038051543|4.28|448.0|261|2|anti-sense	37.15910966729921	0.6739408393984688	6				NaN	NaN	0	NaN	3829	2754	6578
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6603	20.668	NaN	43675	30	0	7461.8	0.214	+			36163	SEKVSHVL	8	96	449.75323843864805	897.4919239440961	2	449.7529602050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEKVSHVL_	ENSG00000137076|ENST00000314888|TLN1;nc|ENSG00000137076|Q9Y490-2|TLN1	90.36981228632155	0.27635063874291205	6				NaN	NaN	0	NaN	3844	2757	6602
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6604	20.672	NaN	9260.7	30	0	3681	0.106	+			36421	SETTAAHSL	9	67	458.7221424264619	915.4297319197238	2	458.72186279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SETTAAHSL_	ENSG00000119408|ENST00000320246|NEK6;nc|ENSG00000119408|Q9HC98-2|NEK6;nc|ENSG00000119408|Q9HC98-3|NEK6;nc|ENSG00000119408|Q9HC98-4|NEK6	104.74654710444128	0.034358562718640136	6				NaN	NaN	0	NaN	3845	2757	6602
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6605	20.674	NaN	8880.1	30	0	1734.3	0.106	+			895	AEHLEKSSL	9	78	507.2669439473584	1012.5193349615168	2	507.2666931152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEHLEKSSL_	ENSG00000080345|ENST00000444746|RIF1;nc|ENSG00000080345|Q5UIP0-2|RIF1;RIF1|p.E1442Gfs*4|1|0.39|ENSG00000080345|chr2:151463835-151463836|-/A|frameshift_variant;RIF1|p.K1441Rfs*18|1|0.2|ENSG00000080345|chr2:151463836-151463836|A/-|frameshift_variant;RIF1|p.K1505Rfs*18|3|0.3|ENSG00000080345|chr2:151464027-151464027|A/-|frameshift_variant	112.41091882917199	0.026537921851008135	6				NaN	NaN	0	NaN	3846	2757	6602
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6606	20.676	NaN	4204.9	30	0	469.98	0.106			+	39812	STLFSNPAS	9	58	462.2288953855373	922.4432378378747	2	462.2284240722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STLFSNPAS_	REV__ADAM23|p.N82Ifs*87|1|0.39|ENSG00000114948|chr2:206445331-206445331|A/-|frameshift_variant	44.377184641726394	0.36891676396732553	6				NaN	NaN	0	NaN	3847	2757	6602
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6607	20.678	NaN	8043.1	30	0	2281.8	0.106	+			49439	VVVGGGGVGK	10	61	414.7507772872806	NaN	0	414.7505187988281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVVGGGGVGK_	ENSG00000126458|ENST00000246792|RRAS;ENSG00000133818|ENST00000256196|RRAS2;nc|ENSG00000133818|P62070-4|RRAS2	85.35947970620816	0.07308776660112143	6				NaN	NaN	0	NaN	3848	2757	6602
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6608	20.679	NaN	5273.6	30	0	721.67	0.036	+			27656	MPSHPDRAY	9	64	537.2453205808857	1072.4760882285714	2	537.2457885742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MPSHPDRAY_	ENSG00000161955|ENST00000338784|TNFSF13;nc|ENSG00000161955|O75888-2|TNFSF13;nc|ENSG00000161955|O75888-3|TNFSF13;nc|ENSG00000161955|O75888-4|TNFSF13;nc|ENSG00000161955|O75888-5|TNFSF13;nc|ENSG00000239697|O43508-2|TNFSF12	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	3849	2757	6602
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6609	20.68	NaN	3733.4	30	0	331.26	0.139			+	31608	QLWASFPP	8	66	473.2445638355764	944.4745747379528	2	473.74542236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QLWASFPP_	REV__ENST00000301765.9_1_11:60899050-60899611:-|nuORF;REV__VPS37C|p.A339Pfs*99|1|0.54|ENSG00000167987|chr11:61131880-61131880|G/-|frameshift_variant;REV__VPS37C|p.P301Hfs*137|1|0.18|ENSG00000167987|chr11:61131986-61131986|G/-|frameshift_variant	33.51558372728122	0.7005509609380386	6				NaN	NaN	0	NaN	3850	2757	6602
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6627	20.72	NaN	26595	30	0	10394	0.214	+			15201	GTSSAVSLK	9	74	425.23748576544574	848.4604185976915	2	425.2372131347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTSSAVSLK_	ENSG00000164828|ENST00000401592|SUN1;ENST00000340926.7_1_7:872152-889323:+|nuORF;ENST00000413171.6_1_7:872152-892516:+|nuORF;ENST00000427969.5_1_7:878456-882177:+|nuORF;ENST00000483996.1_1_7:872152-878624:+|nuORF;nc|ENSG00000164828|O94901-2|SUN1;nc|ENSG00000164828|O94901-3|SUN1;nc|ENSG00000164828|O94901-4|SUN1;nc|ENSG00000164828|O94901-5|SUN1;nc|ENSG00000164828|O94901-6|SUN1;nc|ENSG00000164828|O94901-7|SUN1;nc|ENSG00000164828|O94901-9|SUN1;SUN1|p.E739Gfs*27|1|0.41|ENSG00000164828|chr7:872532-872533|-/G|frameshift_variant	106.68306549817024	0.032382560583716295	6				NaN	NaN	0	NaN	3865	2760	6626
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6628	20.723	NaN	21494	30	0	6712.5	0.106			+	-1	ATGSCRRTTS	10	93	366.17557477198284	1095.5048949161485	3	366.1756591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_ATGSC(Carbamidomethyl (C))RRTTS_	REV__ENST00000399627.3_1_22:50905837-50906184:-|nuORF	45.02220120713402	0.5028680121232791	6				NaN	NaN	0	NaN	3866	2760	6626
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6629	20.725	NaN	2730.4	30	0	572.83	0.106	+			44624	TTEYTKRI	8	43	337.85386886156033	1010.539777184881	3	337.853759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TTEYTKRI_	ENSG00000146006|ENST00000274711|LRRTM2;LRRTM2|p.F436Lfs*5|1|0.16|ENSG00000146006|chr5:138873253-138873253|A/-|frameshift_variant	20.481830146152948	0.8005983782650069	6				NaN	NaN	0	NaN	3867	2760	6626
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6630	20.727	NaN	1337.7	30	0	202.59	0.106			+	31469	QKVSTGRQVG	10	50	530.2992483298792	1058.5839437265583	2	530.29931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QKVSTGRQVG_	REV__ENST00000372674.5_1_X:102564842-102565857:-|nuORF;REV__ENST00000372677.7_1_X:102564842-102565956:-|nuORF;REV__ENST00000449185.1_2_X:102564842-102565604:-|nuORF;REV__ENST00000536889.1_1_X:102564842-102565604:-|nuORF	24.519189625965996	0.6795976720565101	6				NaN	NaN	0	NaN	3868	2760	6626
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6631	20.729	NaN	5249	30	0	797.92	0.106	+			2292	AMAKNRLQ	8	71	466.26152412603955	NaN	0	466.2635192871094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AMAKNRLQ_	ENSG00000146166|ENST00000370657|LGSN;LGSN|p.K343Nfs*7|1|0.18|ENSG00000146166|chr6:63280522-63280522|T/-|frameshift_variant;LGSN|p.Q336Ifs*15|1|0.05|ENSG00000146166|chr6:63280545-63280546|-/AT|frameshift_variant;nc|ENSG00000146166|Q5TDP6-2|LGSN	42.47446043378293	1.7418937515398478	6				NaN	NaN	0	NaN	3869	2760	6626
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6632	20.731	NaN	2157.1	30	0	418.29	0.036	+			20255	KEMQPTHPI	9	56	540.7789176438879	1079.5432823545757	2	540.779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KEMQPTHPI_	ENSG00000134308|ENST00000238081|YWHAQ;ENSG00000164924|ENST00000395958|YWHAZ;ENSG00000166913|ENST00000353703|YWHAB;ENST00000479421.5_2_20:43531717-43535076:+|nuORF;ENST00000480304.5_1_8:101936173-101961117:-|nuORF;ENST00000517727.5_1_8:101936341-101962760:-|nuORF;nc|ENSG00000164924|P63104-2|YWHAZ;nc|ENSG00000166913|P31946-2|YWHAB	74.25504064058377	0.12238981753128622	6				NaN	NaN	0	NaN	3870	2760	6626
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6633	20.731	NaN	1673.3	30	0	254.58	0.139	+			776	AEFAAKAA	8	36	389.7083508529495	777.402148772699	2	389.7081298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AEFAAKAA_	ENSG00000164916|ENST00000328914|FOXK1;nc|ENSG00000164916|P85037-2|FOXK1	42.396135135203025	0.6414440140393314	6				NaN	NaN	0	NaN	3871	2760	6626
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6651	20.77	NaN	21348	30	0	2332.2	0.212				-1	 	0	72	642.9559679243365	1925.8460743732094	3	643.2901000976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3886	2763	6650
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6652	20.773	NaN	8156.1	30	0	826.31	0.106			+	21782	KQTKSAINT	9	72	495.7826630892652	989.5507732453304	2	495.7823181152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KQTKSAINT_	REV__ENSG00000105939|ENST00000242351|ZC3HAV1;REV__nc|ENSG00000105939|Q7Z2W4-2|ZC3HAV1;REV__nc|ENSG00000105939|Q7Z2W4-4|ZC3HAV1;REV__nc|ENSG00000105939|Q7Z2W4-5|ZC3HAV1	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	3887	2763	6650
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6653	20.775	NaN	7310.6	30	0	1829.7	0.106	+			44557	TTAPSLSGK	9	74	431.2373557060855	860.460158478971	2	431.2371826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TTAPSLSGK_	CTNNB1|p.L103Ffs*10|1|0.06|ENSG00000168036|chr3:41225020-41225021|-/TTATTTAAACTATTATACACTA|frameshift_variant;CTNNB1|p.L301Hfs*16|1|0.05|ENSG00000168036|chr3:41225827-41225831|TTCAA/-|frameshift_variant;CTNNB1|p.M271Wfs*5|1|0.08|ENSG00000168036|chr3:41225733-41225733|A/-|frameshift_variant;ENSG00000168036|ENST00000349496|CTNNB1	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	3888	2763	6650
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6654	20.777	NaN	12825	30	0	1492	0.106	+			48823	VVAQTKAISG	10	69	487.2877647980809	972.5609766629618	2	487.2877197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVAQTKAISG_	ENSG00000275395|ENST00000616721|FCGBP;FCGBP-ACSS2|1|fusion;nc|ENSG00000275395|Q9Y6R7|FCGBP	99.78786539795823	0.07832680346773438	6				NaN	NaN	0	NaN	3889	2763	6650
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6655	20.779	NaN	13507	30	0	6832.1	0.106			+	13398	GLELSVKKV	9	52	324.8743943416722	971.6013536252167	3	324.8743591308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GLELSVKKV_	REV__ENSG00000144908|ENST00000393434|ALDH1L1;REV__ENST00000467370.5_1_3:125824416-125834086:-|nuORF;REV__nc|ENSG00000144908|O75891-2|ALDH1L1;REV__nc|ENSG00000144908|O75891-3|ALDH1L1	42.396135135203025	0.392153681582562	6				NaN	NaN	0	NaN	3890	2763	6650
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6656	20.781	NaN	4034.2	30	0	1018.9	0.034	+			39395	STDNVSITK	9	67	482.7508481487197	963.4871433642394	2	482.7506103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STDNVSITK_	ENSG00000133858|ENST00000378743|ZFC3H1;nc|ENSG00000133858|O60293-2|ZFC3H1;nc|ENSG00000133858|O60293-4|ZFC3H1;ZFC3H1|p.E1034Dfs*26|1|0.04|ENSG00000133858|chr12:71632230-71632231|-/AATAAAAATACTG|frameshift_variant;ZFC3H1|p.E390Nfs*4|1|0.39|ENSG00000133858|chr12:71644989-71644989|T/-|frameshift_variant;ZFC3H1|p.K385Nfs*9|5|0.36|ENSG00000133858|chr12:71645001-71645001|T/-|frameshift_variant;ZFC3H1|p.L1048*|1|0.18|ENSG00000133858|chr12:71632189-71632189|A/-|frameshift_variant;ZFC3H1|p.L1693Ffs*10|1|0.1|ENSG00000133858|chr12:71619380-71619381|-/A|frameshift_variant;ZFC3H1|p.V320Sfs*2|1|0.13|ENSG00000133858|chr12:71656942-71656943|-/T|frameshift_variant;ZFC3H1|p.V423Sfs*2|1|0.32|ENSG00000133858|chr12:71644889-71644890|-/T|frameshift_variant	81.52500206392136	0.09095445986635249	6				NaN	NaN	0	NaN	3891	2763	6650
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6657	20.781	NaN	4491.7	30	0	1032.5	0.144				-1	ESPSELMLTL	10	47	379.18900177934717	1134.5451759382415	3	379.1888427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_ESPSELM(Oxidation (M))LTL_	ENSG00000183495|ENST00000389561|EP400;EP400|p.L2071Rfs*37|1|0.23|ENSG00000183495|chr12:132043308-132043326|TCAAGAGTATTGAGTATCT/-|frameshift_variant;EP400|p.P2793Rfs*46|1|0.3|ENSG00000183495|chr12:132064707-132064707|C/-|frameshift_variant;nc|ENSG00000183495|Q96L91-3|EP400;nc|ENSG00000183495|Q96L91-4|EP400;nc|ENSG00000183495|Q96L91-5|EP400;nc|ENSG00000183495|Q96L91|EP400	29.170058357718403	0.6416167986984785	6				NaN	NaN	0	NaN	3892	2763	6650
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6675	20.821	NaN	44547	30	0	8090.6	0.214				-1	 	0	82	581.2627454418082	1740.7664069256243	3	581.2627563476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3907	2766	6674
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6676	20.825	NaN	18553	30	0	4199.6	0.106	+			19405	KAPAPRPSL	9	77	468.7849321083569	935.5553112835138	2	468.78460693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KAPAPRPSL_	DHX38|p.A739Pfs*17|1|0.38|ENSG00000140829|chr16:72105086-72105086|G/-|frameshift_variant;DHX38|p.G603Efs*22|1|0.36|ENSG00000140829|chr16:72103767-72103767|G/-|frameshift_variant;DHX38|p.G697Wfs*16|1|0.38|ENSG00000140829|chr16:72104557-72104558|-/T|frameshift_variant;ENSG00000140829|ENST00000268482|DHX38;nc|ENSG00000140829|Q92620-2|DHX38	77.31757898189308	0.1091473830098891	6				NaN	NaN	0	NaN	3908	2766	6674
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6677	20.827	NaN	53336	30	0	24155	0.106	+			41086	SVINKVTEK	9	67	339.86950098109537	1016.5866735434861	3	339.8694152832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVINKVTEK_	ENSG00000124784|ENST00000379834|RIOK1;RIOK1|p.E533Rfs*20|1|0.19|ENSG00000124784|chr6:7414384-7414385|-/A|frameshift_variant	51.19269402634007	0.2889735674168909	6				NaN	NaN	0	NaN	3909	2766	6674
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6678	20.828	NaN	9125	30	0	771.01	0.106			+	24003	LEATARSLE	9	80	495.266980110514	988.519407287828	2	495.2664794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LEATARSLE_	REV__ENSG00000052126|ENST00000429027|PLEKHA5;REV__nc|ENSG00000052126|Q9HAU0-2|PLEKHA5;REV__nc|ENSG00000052126|Q9HAU0-4|PLEKHA5;REV__nc|ENSG00000052126|Q9HAU0-5|PLEKHA5;REV__nc|ENSG00000052126|Q9HAU0-8|PLEKHA5;REV__nc|ENSG00000052126|Q9HAU0|PLEKHA5	76.7741389293348	0.11149722112137898	6				NaN	NaN	0	NaN	3910	2766	6674
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6679	20.83	NaN	14284	30	0	8820.7	0.106	+			19294	KAFVGAFKK	9	69	332.5393701652032	994.5962810958097	3	332.539306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KAFVGAFKK_	ENSG00000160796|ENST00000450053|NBEAL2;NBEAL2|p.C1705Vfs*45|1|0.24|ENSG00000160796|chr3:47002246-47002246|T/-|frameshift_variant;NBEAL2|p.P1303Lfs*63|1|0.21|ENSG00000160796|chr3:47000002-47000002|C/-|frameshift_variant;NBEAL2|p.Y1346Tfs*20|1|0.44|ENSG00000160796|chr3:47000132-47000132|T/-|frameshift_variant;nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2;nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2	72.87924865735499	0.12833875048249987	6				NaN	NaN	0	NaN	3911	2766	6674
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6680	20.832	NaN	6526.8	30	0	1534.7	0.034	+			20091	KEKIQTGL	8	68	458.776682770584	915.538812607968	2	458.7762756347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KEKIQTGL_	ENSG00000140575|ENST00000268182|IQGAP1;ENST00000561132.5_1_15:91029339-91034840:+|nuORF;IQGAP1|p.S1529Afs*10|1|0.15|ENSG00000140575|chr15:90492665-90492665|A/-|frameshift_variant	101.60071028292904	0.24979566554663588	6				NaN	NaN	0	NaN	3912	2766	6674
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6681	20.833	NaN	3556.7	30	0	671.53	0.138	+			48649	VTSQPCKK	8	61	445.7416430631532	889.4687331931065	2	445.741455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VTSQPCKK_	ENSG00000198722|ENST00000635942|UNC13B	71.29570347882199	0.39610197767395533	6				NaN	NaN	0	NaN	3913	2766	6674
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6701	20.868	NaN	52159	30	0	11691	0.214	+			3852	ATALPTGTSK	10	78	473.76386619115567	945.5131794491114	2	473.7636413574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATALPTGTSK_	ENSG00000196470|ENST00000394725|SIAH1;nc|ENSG00000196470|Q8IUQ4-2|SIAH1;nc|ENSG00000196470|Q8IUQ4-3|SIAH1	112.2953585152457	0.0411829880542106	6				NaN	NaN	0	NaN	3930	2769	6700
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6702	20.872	NaN	34129	30	0	17120	0.106	+			23144	KVWTSQLK	8	69	495.29306545716014	988.5715779811203	2	495.2926025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVWTSQLK_	ENSG00000123836|ENST00000367080|PFKFB2;ENST00000411990.6_1_1:207235951-207252361:+|nuORF;nc|ENSG00000123836|O60825-2|PFKFB2	94.00642277110589	0.2653416297186628	6				NaN	NaN	0	NaN	3931	2769	6700
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6703	20.874	NaN	6599.6	30	0	1274.2	0.106	+			4811	ATNTSAPDLK	10	67	509.2643070675567	1016.5140612019134	2	509.2642822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATNTSAPDLK_	ENSG00000047849|ENST00000683076|MAP4;MAP4|p.T960Qfs*35|1|0.3|ENSG00000047849|chr3:47869309-47869309|T/-|frameshift_variant;MAP4|p.V999*|1|0.25|ENSG00000047849|chr3:47867318-47867318|T/-|frameshift_variant;nc|ENSG00000047849|P27816-2|MAP4;nc|ENSG00000047849|P27816-4|MAP4;nc|ENSG00000047849|P27816-5|MAP4;nc|ENSG00000047849|P27816-6|MAP4;nc|ENSG00000047849|P27816|MAP4	139.38205640894643	0.010918844784185366	6				NaN	NaN	0	NaN	3932	2769	6700
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6704	20.876	NaN	36668	30	0	6716.6	0.106	+			5353	ATVTPSPVK	9	83	450.26352280097626	898.5124926687525	2	450.26336669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATVTPSPVK_	ENSG00000069275|ENST00000367142|NUCKS1;nc|ENSG00000069275|Q9H1E3-2|NUCKS1	72.87924865735499	0.12833875048249987	6				NaN	NaN	0	NaN	3933	2769	6700
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6705	20.878	NaN	8303.4	30	0	1620.8	0.106	+			35637	SCGPPGMTK	9	67	439.19868595857486	876.3828189839497	2	439.1986999511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SCGPPGMTK_	ENSG00000137857|ENST00000389037|DUOX1;ENSG00000140279|ENST00000389039|DUOX2;ENST00000561220.6_1_15:45434150-45457096:+|nuORF;nc|ENSG00000137857|Q9NRD9-2|DUOX1;nc|ENSG00000140279|Q9NRD8|DUOX2	46.45678178249821	0.34452392205506005	6				NaN	NaN	0	NaN	3934	2769	6700
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6706	20.88	NaN	24068	30	0	7188.4	0.106	+			44900	TTYPQTTIRK	10	62	403.5595895895807	1207.6569393689422	3	403.55926513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TTYPQTTIRK_	ENSG00000124429|ENST00000262753|POF1B;nc|ENSG00000124429|Q8WVV4-1|POF1B;nc|ENSG00000124429|Q8WVV4-3|POF1B	20.94693142431847	0.7087701759873708	6				NaN	NaN	0	NaN	3935	2769	6700
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6707	20.881	NaN	2654.7	30	0	344.75	0.032			+	24536	LGLKKGSE	8	58	416.25031486265163	830.4860767921033	2	416.2502136230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LGLKKGSE_	REV__ASH1L|p.H1793Ifs*7|1|0.13|ENSG00000116539|chr1:155438778-155438778|G/-|frameshift_variant;REV__ASH1L|p.I970Lfs*9|1|0.2|ENSG00000116539|chr1:155479962-155479962|T/-|frameshift_variant;REV__ASH1L|p.K1222Rfs*11|4|0.27|ENSG00000116539|chr1:155479205-155479205|T/-|frameshift_variant;REV__ASH1L|p.K1533Sfs*17|1|0.25|ENSG00000116539|chr1:155478272-155478272|T/-|frameshift_variant;REV__ASH1L|p.K2377Nfs*5|1|0.28|ENSG00000116539|chr1:155354570-155354570|T/-|frameshift_variant;REV__ASH1L|p.N1822Tfs*2|1|0.33|ENSG00000116539|chr1:155438690-155438690|T/-|frameshift_variant;REV__ASH1L|p.R712Efs*23|3|0.35|ENSG00000116539|chr1:155480736-155480736|T/-|frameshift_variant;REV__ASH1L|p.S2309Ifs*11|1|0.64|ENSG00000116539|chr1:155357635-155357636|-/T|frameshift_variant;REV__ENSG00000116539|ENST00000392403|ASH1L;REV__nc|ENSG00000116539|Q9NR48|ASH1L	33.51558372728122	0.7005509609380386	6				NaN	NaN	0	NaN	3936	2769	6700
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6725	20.919	NaN	33125	30	0	11487	0.214	+			39154	SSVPYSTAK	9	75	470.24295802432493	938.4713631154499	2	470.2427978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSVPYSTAK_	ENSG00000126883|ENST00000359428|NUP214;ENST00000525980.5_1_9:134025776-134070755:+|nuORF;nc|ENSG00000126883|P35658-2|NUP214;nc|ENSG00000126883|P35658-3|NUP214;nc|ENSG00000126883|P35658-4|NUP214;NUP214|p.P1285Rfs*3|1|0.28|ENSG00000126883|chr9:131197346-131197359|CCCAGGAGAACCTG/-|frameshift_variant	85.86182877749512	0.07653218437724067	6				NaN	NaN	0	NaN	3951	2772	6724
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6726	20.923	NaN	9277.9	30	0	2800.4	0.106	+			46025	VAVSATIPN	9	76	436.2482749791625	870.481997025125	2	436.248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VAVSATIPN_	ENSG00000162669|ENST00000370425|HFM1;HFM1|p.K1137Hfs*4|1|0.1|ENSG00000162669|chr1:91277045-91277046|-/ATTTAAAGTG|frameshift_variant;HFM1|p.K1137Nfs*44|1|0.18|ENSG00000162669|chr1:91277043-91277043|T/-|frameshift_variant;HFM1|p.N1388Tfs*37|1|0.26|ENSG00000162669|chr1:91262316-91262316|T/-|frameshift_variant;HFM1|p.V1397Sfs*6|1|0.31|ENSG00000162669|chr1:91262290-91262291|-/T|frameshift_variant	45.9519527083369	0.35044536499095585	6				NaN	NaN	0	NaN	3952	2772	6724
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6727	20.925	NaN	7375.6	30	0	4112.4	0.106	+			24638	LGSRSMAP	8	46	409.7131964899467	817.4118400466934	2	409.7131652832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LGSRSMAP_	ENST00000460783.1_1_21:38071452-38071680:+|nuORF	25.450171626174864	0.7628259754767981	6				NaN	NaN	0	NaN	3953	2772	6724
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6728	20.927	NaN	7287.4	30	0	1199.3	0.106	+			26545	LTSDELHL	8	73	464.24238613185605	926.4702193305121	2	464.2424011230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LTSDELHL_	ENSG00000175048|ENST00000359775|ZDHHC14;nc|ENSG00000175048|Q8IZN3-2|ZDHHC14	42.47446043378293	0.6409579893742323	6				NaN	NaN	0	NaN	3954	2772	6724
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6729	20.928	NaN	4974.2	30	0	549.81	0.106	+			13244	GILKPLPKK	9	73	497.3450553531754	992.6755577731508	2	497.3446960449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GILKPLPKK_	ENSG00000090861|ENST00000261772|AARS1;nc|ENSG00000090861|P49588-2|AARS1	58.78195531508484	0.22376836668196862	6				NaN	NaN	0	NaN	3955	2772	6724
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6730	20.93	NaN	3092.9	30	0	1868.8	0.038				-1	SMRKLIADLQ	10	36	397.5562525892319	1189.6469283678957	3	397.5557861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_SM(Oxidation (M))RKLIADLQ_	ENSG00000142949|ENST00000359947|PTPRF;nc|ENSG00000142949|P10586-2|PTPRF	21.780426970141523	0.7019635145664065	6				NaN	NaN	0	NaN	3956	2772	6724
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6731	20.931	NaN	2848.8	30	0	806.77	0.142				-1	 	0	49	374.5609785644238	1120.6611062934714	3	374.56085205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3957	2772	6724
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6751	20.97	NaN	284380	30	0	42979	0.147	+			6078	AVNAHSNILK	10	101	533.803569484806	1065.5925860364118	2	533.8036499023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVNAHSNILK_	ENSG00000132305|ENST00000410111|IMMT;ENST00000409258.2_1_2:86386442-86398424:-|nuORF;ENST00000435590.1_1_21:46097057-46097849:-|nuORF;ENST00000474969.5_1_2:86385703-86422514:-|nuORF;ENST00000490238.5_1_2:86389097-86393741:-|nuORF;nc|ENSG00000132305|Q16891-2|IMMT;nc|ENSG00000132305|Q16891-3|IMMT;nc|ENSG00000132305|Q16891-4|IMMT	140.11223852658463	0.010724162804194332	6				NaN	NaN	0	NaN	3974	2775	6750
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6752	20.973	NaN	69360	30	0	15744	0.106	+			16143	HEAEGHIVTC	10	88	548.2480536213149	1094.4815543094296	2	548.2484741210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HEAEGHIVTC_	ENSG00000100028|ENST00000215829|SNRPD3;ENST00000468770.1_1_22:24953642-24953888:+|nuORF;nc|ENSG00000286070|P62318-2|SNRPD3	157.32903759742106	0.007194212422862153	6				NaN	NaN	0	NaN	3975	2775	6750
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6753	20.975	NaN	9583.5	30	0	1923.5	0.106	+			93	AADCAHEL	8	62	443.6897004580333	885.3648479828666	2	443.6895751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_AADC(Carbamidomethyl (C))AHEL_	ENSG00000157379|ENST00000288111|DHRS1;ENST00000558340.1_1_14:24760067-24761569:-|nuORF;ENST00000561137.5_1_14:24760413-24761527:-|nuORF;ENST00000561273.5_1_14:24760714-24761569:-|nuORF	94.00642277110589	0.2653416297186628	6				NaN	NaN	0	NaN	3976	2775	6750
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6754	20.977	NaN	27277	30	0	3303.5	0.106	+			19026	IWSKGSKSQ	9	103	340.8538789128932	1019.5398073388797	3	340.85394287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IWSKGSKSQ_	ENSG00000153107|ENST00000341068|ANAPC1;ENST00000426186.1_3_2:87098444-87121919:+|nuORF;ENST00000489177.1_1_2:112630836-112638411:-|nuORF	56.43379154798735	0.2433427591689151	6				NaN	NaN	0	NaN	3977	2775	6750
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6755	20.978	NaN	7870.1	30	0	3115.3	0.106	+			3994	ATAVYQAK	8	67	426.2346514803579	850.4547500275158	2	426.2345275878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATAVYQAK_	ENSG00000136146|ENST00000258648|MED4;nc|ENSG00000136146|Q9NPJ6-2|MED4	82.30502934623384	0.30436709589983096	6				NaN	NaN	0	NaN	3978	2775	6750
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6756	20.98	NaN	26384	30	0	8660.6	0.106	+			40483	STYATTIRDSK	11	68	414.8823449187763	1241.625205356529	3	414.8822021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STYATTIRDSK_	ENSG00000127054|ENST00000435064|INTS11;ENST00000421495.6_1_1:1249445-1259984:-|nuORF;ENST00000470030.6_1_1:1248876-1250311:-|nuORF;ENST00000488042.6_1_1:1250056-1259988:-|nuORF;ENST00000531020.1_1_1:1249679-1250311:-|nuORF;nc|ENSG00000127054|Q5TA45-2|INTS11;nc|ENSG00000127054|Q5TA45-3|INTS11;nc|ENSG00000127054|Q5TA45-4|INTS11;nc|ENSG00000127054|Q5TA45-5|INTS11	39.873155843976775	0.5596786644756743	6				NaN	NaN	0	NaN	3979	2775	6750
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6757	20.982	NaN	3928.7	30	0	596.04	0.037	+			43955	TPEEDQRTY	9	66	569.7545184541701	1137.4944839751402	2	569.754638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TPEEDQRTY_	ENSG00000105771|ENST00000270066|SMG9;ENST00000595700.5_1_19:44242246-44254893:-|nuORF;nc|ENSG00000105771|Q9H0W8-2|SMG9;SMG9|p.H366Tfs*2|1|0.22|ENSG00000105771|chr19:43734395-43734395|G/-|frameshift_variant	120.8684288430529	0.02067403653475984	6				NaN	NaN	0	NaN	3980	2775	6750
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6775	21.019	NaN	24060	30	0	5689.2	0.214	+			2633	AQIKEHLLK	9	83	360.55720300804705	1078.6497796243411	3	360.55712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AQIKEHLLK_	EIF2B5|p.L605Pfs*9|1|0.26|ENSG00000145191|chr3:184143504-184143505|-/C|frameshift_variant;ENSG00000145191|ENST00000648915|EIF2B5;ENST00000481054.5_1_3:183853173-183856676:+|nuORF;ENST00000491144.5_1_3:183853173-183855624:+|nuORF	89.02883481214508	0.06760336634167786	6				NaN	NaN	0	NaN	3995	2778	6774
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6776	21.022	NaN	12190	30	0	4285	0.106	+			39316	STATATVSVGK	11	70	511.2798396519395	1020.545126370679	2	511.27984619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STATATVSVGK_	ENSG00000261150|ENST00000615648|EPPK1;EPPK1|p.G2015Vfs*36|2|0.33|ENSG00000261150|chr8:143867210-143867210|C/-|frameshift_variant;EPPK1|p.Q829Rfs*8|1|0.05|ENSG00000261150|chr8:143870770-143870770|C/-|frameshift_variant;EPPK1|p.Y695Ifs*68|1|0.36|ENSG00000261150|chr8:143871171-143871172|-/T|frameshift_variant	139.3066351666995	0.000563693985352425	6				NaN	NaN	0	NaN	3996	2778	6774
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6777	21.024	NaN	12243	30	0	1379.8	0.106	+			36086	SEKDTKQIL	9	83	531.2953704253791	1060.5761879175582	2	531.2955932617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEKDTKQIL_	ENSG00000183207|ENST00000595090|RUVBL2;ENST00000596247.5_1_19:49507512-49519096:+|nuORF;nc|ENSG00000183207|Q9Y230-2|RUVBL2	82.83050618871818	0.08530945204495013	6				NaN	NaN	0	NaN	3997	2778	6774
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6778	21.026	NaN	7231	30	0	1254.3	0.106	+			20645	KGHSQVLQ	8	68	448.7509264102907	895.4872998873814	2	448.75079345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KGHSQVLQ_	ENSG00000144802|ENST00000326172|NFKBIZ;ENST00000465476.1_1_3:101573497-101574322:+|nuORF;nc|ENSG00000144802|Q9BYH8-2|NFKBIZ;nc|ENSG00000144802|Q9BYH8-3|NFKBIZ	47.657333605630114	0.6087971902037268	6				NaN	NaN	0	NaN	3998	2778	6774
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6779	21.028	NaN	7767.6	30	0	2266.4	0.106			+	35263	SALPHLGSGSI	11	31	346.85733202194535	1037.5501666660361	3	346.8573303222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SALPHLGSGSI_	REV__ENSG00000100625|ENST00000216513|SIX4	26.69291269510374	0.70980431218767	6				NaN	NaN	0	NaN	3999	2778	6774
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6780	21.03	NaN	13138	30	0	1838.3	0.034	+			44731	TTLSGGPLQP	10	81	485.7639609493779	969.5133689655559	2	485.7635192871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TTLSGGPLQP_	ENST00000356956.5_2_6:160431737-160445634:+|nuORF	64.20726635412375	0.3275756395432415	6				NaN	NaN	0	NaN	4000	2778	6774
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6781	21.03	NaN	6096.7	30	0	692.1	0.14			+	16549	HEVQALNSK	9	72	513.2723266095431	NaN	0	513.272216796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HEVQALNSK_	REV__ENSG00000166689|ENST00000531066|PLEKHA7;REV__nc|ENSG00000166689|Q6IQ23-2|PLEKHA7;REV__nc|ENSG00000166689|Q6IQ23|PLEKHA7;REV__PLEKHA7|p.F802Sfs*21|2|0.18|ENSG00000166689|chr11:16800978-16800978|A/-|frameshift_variant;REV__PLEKHA7|p.N838Ifs*61|2|0.29|ENSG00000166689|chr11:16794915-16794915|T/-|frameshift_variant;REV__PLEKHA7|p.P474Hfs*18|1|0.07|ENSG00000166689|chr11:16817238-16817245|GCTCTTGG/-|frameshift_variant	49.536043120802724	0.20989033510253738	6				NaN	NaN	0	NaN	4001	2778	6774
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6799	21.07	NaN	9647.6	30	0	1639.5	0.214			+	46782	VHDKLSVK	8	78	463.27678581303223	924.5390186928645	2	463.276611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VHDKLSVK_	REV__KCNQ2|p.R442H|1|0.31|ENSG00000075043|chr20:63415103-63415103|C/T|missense_variant	54.776311868738084	0.5534952410049249	6				NaN	NaN	0	NaN	4016	2781	6798
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6800	21.073	NaN	6278.1	30	0	777.1	0.106	+			35947	SEGPHHVAL	9	70	473.74117034320636	945.4677877532127	2	473.7405090332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEGPHHVAL_	ENSG00000198836|ENST00000361510|OPA1;ENST00000475899.1_1_3:193355061-193361921:+|nuORF;nc|ENSG00000198836|O60313-11|OPA1;nc|ENSG00000198836|O60313-13|OPA1;nc|ENSG00000198836|O60313-2|OPA1;nc|ENSG00000198836|O60313-9|OPA1;nc|ENSG00000198836|O60313|OPA1	68.484700416344	0.1473408039581241	6				NaN	NaN	0	NaN	4017	2781	6798
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6801	21.075	NaN	5588.3	30	0	598.07	0.106	+			30165	PSFWGQQPL	9	70	530.2663476808636	1058.5181424285272	2	530.2667846679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PSFWGQQPL_	DAB1|p.A369Gfs*60|1|0.22|ENSG00000173406|chr1:57015320-57015321|-/C|frameshift_variant;DAB1|p.L420Pfs*9|1|0.38|ENSG00000173406|chr1:57015167-57015168|-/G|frameshift_variant;ENSG00000173406|ENST00000371236|DAB1;nc|ENSG00000173406|O75553-3|DAB1;nc|ENSG00000173406|O75553-4|DAB1;nc|ENSG00000173406|O75553-5|DAB1;nc|ENSG00000173406|O75553|DAB1	38.80614096846853	0.43426287593479557	6				NaN	NaN	0	NaN	4018	2781	6798
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6802	21.077	NaN	12752	30	0	4833.9	0.106	+			11623	FPYTSKNEKIK	11	71	452.251377728796	1353.732303786588	3	452.2513427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FPYTSKNEKIK_	tr|U7SMH7|U7SMH7_FUSNULipoproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01873PE=4SV=1	47.227680397652996	0.4590463137409202	6				NaN	NaN	0	NaN	4019	2781	6798
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6803	21.079	NaN	18638	30	0	2012.3	0.106	+			33440	RILACGVAK	9	75	494.292268230313	986.5699835274261	2	494.2921142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_RILAC(Carbamidomethyl (C))GVAK_	ENSG00000265972|ENST00000582401|TXNIP	110.11987700582712	0.028875675806141952	6				NaN	NaN	0	NaN	4020	2781	6798
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6804	21.081	NaN	6697.9	30	0	975.93	0.033	+			34943	SAAKGVAAY	9	64	419.22695206683693	836.4393512004739	2	419.22674560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SAAKGVAAY_	ENSG00000062822|ENST00000440232|POLD1;ENST00000596648.1_1_19:50918770-50919194:+|nuORF	66.42927471994793	0.16001998865088202	6				NaN	NaN	0	NaN	4021	2781	6798
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6805	21.081	NaN	4188.8	30	0	435.46	0.139	+			42492	TANEANPLK	9	62	479.253774520215	956.49299610723	2	479.25341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TANEANPLK_	ENSG00000187325|ENST00000341864|TAF9B	56.43379154798735	0.2433427591689151	6				NaN	NaN	0	NaN	4022	2781	6798
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6823	21.119	NaN	76882	30	0	24278	0.214	+			9	AAAAPGRAL	9	66	399.23513491210804	796.4557168910161	2	399.2350158691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAAAPGRAL_	ENST00000267984.3_1_15:81293571-81293748:+|nuORF;REV__ENST00000533080.5_1_11:44748805-44786009:+|nuORF	110.33723246496265	0.028653888678955353	6				NaN	NaN	0	NaN	4037	2784	6822
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6824	21.123	NaN	7252.4	30	0	968.71	0.106	+			20791	KIADMGHLK	9	62	506.78406219219465	1011.5535714511893	2	506.7839660644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KIADMGHLK_	ENSG00000132646|ENST00000379143|PCNA	123.20810148215591	0.019257656778428764	6				NaN	NaN	0	NaN	4038	2784	6822
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6825	21.125	NaN	18293	30	0	6465.7	0.106	+			22451	KTLESAVVK	9	81	487.79775894521663	973.5809649572333	2	487.79742431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KTLESAVVK_	ENSG00000106772|ENST00000376718|PRUNE2;ENST00000492157.5_1_9:79438526-79520879:-|nuORF;nc|ENSG00000106772|Q8WUY3-2|PRUNE2;nc|ENSG00000106772|Q8WUY3-3|PRUNE2;nc|ENSG00000106772|Q8WUY3-4|PRUNE2;PRUNE2|p.L2591Qfs*12|1|0.19|ENSG00000106772|chr9:76703839-76703842|CTAA/-|frameshift_variant	129.42129120953632	0.01549634589885217	6				NaN	NaN	0	NaN	4039	2784	6822
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6826	21.127	NaN	9249.8	30	0	3503.2	0.106			+	-1	GPLCRPLLS	9	60	338.1917041398674	1011.5532830198022	3	338.1917419433594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_GPLC(Carbamidomethyl (C))RPLLS_	REV__ENST00000299106.8_2_11:134020220-134020457:+|nuORF	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	4040	2784	6822
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6827	21.129	NaN	10994	30	0	2826.8	0.106			+	44537	TSYKTEIQ	8	66	485.24797571473067	968.4813984962614	2	485.24786376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TSYKTEIQ_	REV__ENSG00000157330|ENST00000614859|CFAP107	44.116797842482775	0.6307669463330267	6				NaN	NaN	0	NaN	4041	2784	6822
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6828	21.13	NaN	7778.4	30	0	953.52	0.034	+			18621	ISSNWGNPG	9	77	466.21692760142446	930.4193022696489	2	466.21685791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ISSNWGNPG_	ENSG00000167098|ENST00000356173|SUN5	44.116797842482775	0.37197099687881774	6				NaN	NaN	0	NaN	4042	2784	6822
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6829	21.131	NaN	1261.7	30	0	238.81	0.142	+			22640	KTVPVEAVTSK	11	44	579.8400845878772	1157.6656162425543	2	579.8402709960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KTVPVEAVTSK_	ENSG00000085733|ENST00000301843|CTTN;ENST00000393747.3_1_11:70269077-70281851:+|nuORF;nc|ENSG00000085733|Q14247-2|CTTN;nc|ENSG00000085733|Q14247-3|CTTN	29.550750289552195	0.6798279264880025	6				NaN	NaN	0	NaN	4043	2784	6822
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6847	21.167	NaN	51569	30	0	8870.6	0.214	+			33058	REKETKALSL	10	108	392.23135596090884	1173.6722384829266	3	392.2310791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_REKETKALSL_	ENSG00000100345|ENST00000216181|MYH9;ENSG00000133026|ENST00000360416|MYH10;ENSG00000133392|ENST00000300036|MYH11;nc|ENSG00000100345|P35579-2|MYH9;nc|ENSG00000133026|P35580-2|MYH10;nc|ENSG00000133026|P35580-3|MYH10;nc|ENSG00000133026|P35580-5|MYH10;nc|ENSG00000133026|P35580|MYH10;nc|ENSG00000133392|P35749-2|MYH11;nc|ENSG00000133392|P35749-3|MYH11;nc|ENSG00000133392|P35749-4|MYH11;SYNDIG1-MYH9|1|fusion	76.16968421966216	0.22691431239609447	6				NaN	NaN	0	NaN	4058	2787	6846
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6848	21.171	NaN	7364.1	30	0	450.97	0.106	+			36290	SEREKVAQL	9	78	530.2938998011422	NaN	0	530.2936401367188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEREKVAQL_	ENSG00000108592|ENST00000427159|FTSJ3	75.04331003522576	0.0883683072398826	6				NaN	NaN	0	NaN	4059	2787	6846
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6849	21.173	NaN	40981	30	0	6497.6	0.106				-1	 	0	84	618.6051235569367	1852.79354127101	3	618.939208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4060	2787	6846
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6850	21.175	NaN	13609	30	0	2057.8	0.106	+			19321	KAHLGTAL	8	75	405.74539144916844	809.4762299651369	2	405.7451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KAHLGTAL_	ENSG00000186468|ENST00000296674|RPS23;RPS23|p.N39T|1|0.25|ENSG00000186468|chr5:82277741-82277741|T/G|missense_variant	87.75429964447693	0.2842685068779738	6				NaN	NaN	0	NaN	4061	2787	6846
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6851	21.177	NaN	11242	30	0	1434.9	0.106	+			48571	VTQAPISAR	9	68	471.77191702548464	941.5292811177693	2	471.77166748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTQAPISAR_	ENSG00000101407|ENST00000373447|TTI1	96.66504779109242	0.04607440320619715	6				NaN	NaN	0	NaN	4062	2787	6846
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6852	21.178	NaN	2943.7	30	0	381.65	0.036	+			16164	HEAERTEVL	9	65	542.2762248309184	1082.5378967286367	2	542.2757568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HEAERTEVL_	CNTROB|p.L713Cfs*27|1|0.4|ENSG00000170037|chr17:7947710-7947710|T/-|frameshift_variant;ENSG00000170037|ENST00000563694|CNTROB;ENST00000571632.5_1_17:7838298-7849136:+|nuORF;nc|ENSG00000170037|Q8N137-2|CNTROB;nc|ENSG00000170037|Q8N137-3|CNTROB;nc|ENSG00000170037|Q8N137-4|CNTROB;nc|ENSG00000170037|Q8N137-5|CNTROB	70.8162118820467	0.13725933411854815	6				NaN	NaN	0	NaN	4063	2787	6846
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6853	21.179	NaN	7483	30	0	1531.5	0.139	+			2879	ASASASLPTK	10	70	466.7561360393337	931.4977191454674	2	466.7558288574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASASASLPTK_	ENSG00000141568|ENST00000335255|FOXK2;ENST00000473637.6_1_17:80553997-80559372:+|nuORF;ENST00000529652.1_1_17:80558017-80559372:+|nuORF;ENST00000571989.1_1_17:80551586-80559372:+|nuORF	86.88156770896713	0.14892753630261096	6				NaN	NaN	0	NaN	4064	2787	6846
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6871	21.215	NaN	25771	30	0	2584.3	0.214	+			35774	SEADKIKVA	9	90	480.7714574468554	959.5283619605108	2	480.77130126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEADKIKVA_	ENSG00000178035|ENST00000326739|IMPDH2;ENST00000466147.5_1_3:49062090-49062580:-|nuORF;ENST00000484872.1_1_3:49061926-49062670:-|nuORF	90.60085204095205	0.06317133949006545	6				NaN	NaN	0	NaN	4079	2790	6870
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6872	21.219	NaN	15298	30	0	2476.8	0.106				-1	TLGKNDTMMCA	11	80	414.5156668243063	1240.525171073119	3	414.51544189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_TLGKNDTMMC(Carbamidomethyl (C))A_	EML5|p.D1019Efs*4|1|0.07|ENSG00000165521|chr14:88681957-88681958|-/AATATGT|frameshift_variant;EML5|p.G1621Efs*19|1|0.2|ENSG00000165521|chr14:88624982-88624982|C/-|frameshift_variant;EML5|p.N1682Mfs*7|1|0.04|ENSG00000165521|chr14:88621246-88621246|T/-|frameshift_variant;ENSG00000165521|ENST00000554922|EML5;nc|ENSG00000165521|Q05BV3-2|EML5;nc|ENSG00000165521|Q05BV3|EML5	22.561587123415745	0.7531385481947795	6				NaN	NaN	0	NaN	4080	2790	6870
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6873	21.221	NaN	5990.3	30	0	1431.5	0.106	+			16144	HEAEGHIVTC	10	68	548.2480536213149	1094.4815543094296	2	548.25048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HEAEGHIVTC_	ENSG00000100028|ENST00000215829|SNRPD3;ENST00000468770.1_1_22:24953642-24953888:+|nuORF;nc|ENSG00000286070|P62318-2|SNRPD3	45.97224482568171	0.49411383603842696	6				NaN	NaN	0	NaN	4081	2790	6870
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6874	21.223	NaN	7976.7	30	0	2358.9	0.106	+			2148	ALLGKVELQQ	10	52	366.8888395519603	1097.644689256081	3	366.8887023925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ALLGKVELQQ_	ENSG00000113048|ENST00000261413|MRPS27;nc|ENSG00000113048|Q92552-2|MRPS27	29.14955571784316	0.6417842315402807	6				NaN	NaN	0	NaN	4082	2790	6870
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6875	21.224	NaN	4373.2	30	0	1169.8	0.106			+	48362	VTHAPALP	8	51	403.231976111633	804.449399290066	2	403.2317810058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTHAPALP_	REV__ENST00000389005.5_1_17:3716188-3716341:-|nuORF	28.2542754592877	0.7411748056684583	6				NaN	NaN	0	NaN	4083	2790	6870
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6876	21.226	NaN	3521	30	0	997.11	0.106			+	-1	LGACIAAILGK	11	37	362.88169804946824	1085.6232647486047	3	362.8816223144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_LGAC(Carbamidomethyl (C))IAAILGK_	REV__ENST00000497113.1_1_1:8022845-8031696:+|nuORF	37.50817390946774	0.5920388381045607	6				NaN	NaN	0	NaN	4084	2790	6870
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6877	21.228	NaN	3581.9	30	0	1258.2	0.036	+			6834	CICPSAFRR	9	57	526.760359860037	1051.506166786874	2	526.7605590820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_CICPSAFRR_	ENST00000330701.5_1_8:144333181-144341984:+|nuORF;ENST00000520584.5_1_8:144333229-144335235:+|nuORF	25.57405402267927	0.5642445186134241	6				NaN	NaN	0	NaN	4085	2790	6870
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6896	21.265	NaN	26629	30	0	18838	0.214			+	17919	IGKAFGSVVT	10	53	326.85881381520755	977.5546120458228	3	326.8587951660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IGKAFGSVVT_	REV__tr|U7SSR6|U7SSR6_FUSNUDNAprotectingproteinDprAOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01464PE=3SV=1	40.77816245573522	0.5419747034533848	6				NaN	NaN	0	NaN	4101	2793	6895
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6897	21.268	NaN	19758	30	0	12240	0.106				-1	 	0	51	323.2015741832625	644.388595433325	2	323.2015380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4102	2793	6895
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6898	21.271	NaN	7094.3	30	0	1037.3	0.106	+			39492	STFKLKSEVNK	11	72	427.57847563364646	1279.7135975011395	3	427.5783386230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STFKLKSEVNK_	ENSG00000189057|ENST00000343597|FAM111B;FAM111B|p.I283Lfs*16|1|0.32|ENSG00000189057|chr11:59124938-59124938|A/-|frameshift_variant;FAM111B|p.I433Vfs*2|1|0.04|ENSG00000189057|chr11:59125393-59125394|-/GTTTG|frameshift_variant;FAM111B|p.N499Tfs*10|1|0.11|ENSG00000189057|chr11:59125589-59125589|A/-|frameshift_variant;FAM111B|p.Q276Hfs*6|1|0.07|ENSG00000189057|chr11:59124924-59124925|-/T|frameshift_variant;nc|ENSG00000189057|Q6SJ93-2|FAM111B	44.6138410219848	0.4948116169766096	6				NaN	NaN	0	NaN	4103	2793	6895
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6899	21.272	NaN	5693.4	30	0	3055	0.106	+			41048	SVIEKLAKK	9	48	339.2218255879759	NaN	0	339.2218322753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVIEKLAKK_	ENSG00000168016|ENST00000645898|TRANK1;nc|ENSG00000168016|O15050|TRANK1;TRANK1|p.F2073Lfs*13|1|0.1|ENSG00000168016|chr3:36833232-36833232|A/-|frameshift_variant;TRANK1|p.P972Qfs*12|1|0.34|ENSG00000168016|chr3:36856675-36856675|G/-|frameshift_variant;TRANK1|p.V1077Wfs*30|1|0.29|ENSG00000168016|chr3:36856362-36856362|T/-|frameshift_variant	49.536043120802724	0.20989033510253738	6				NaN	NaN	0	NaN	4104	2793	6895
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6900	21.274	NaN	14741	30	0	7199.5	0.106	+			6014	AVMDNKNPTIK	11	66	410.8885829470913	1229.643919441474	3	410.8885498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVMDNKNPTIK_	CKAP5|p.K1126Rfs*25|1|0.46|ENSG00000175216|chr11:46767609-46767609|T/-|frameshift_variant;CKAP5|p.V1971Lfs*42|1|0.03|ENSG00000175216|chr11:46744211-46744212|-/TTGAAAAAAAG|frameshift_variant;ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5	55.721020083383095	0.36165090524447163	6				NaN	NaN	0	NaN	4105	2793	6895
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6901	21.276	NaN	4677.1	30	0	483.17	0.032			+	10713	FAATLTGK	8	59	404.73213716796636	807.4497214027327	2	404.7318420410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FAATLTGK_	REV__ENSG00000151148|ENST00000342494|UBE3B;REV__ENST00000540230.5_1_12:109928780-109928933:+|nuORF;REV__nc|ENSG00000151148|Q7Z3V4-2|UBE3B;REV__UBE3B|p.F731Lfs*71|1|0.07|ENSG00000151148|chr12:109521260-109521260|T/-|frameshift_variant;REV__UBE3B|p.S234Y|1|0.35|ENSG00000151148|chr12:109491115-109491115|C/A|missense_variant	65.80317337860623	0.44433089765398776	6				NaN	NaN	0	NaN	4106	2793	6895
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6902	21.276	NaN	7341.5	30	0	893.26	0.141	+			35039	SADKTVRVY	9	74	519.78280973507	1037.55106653694	2	519.7828979492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SADKTVRVY_	ENSG00000103994|ENST00000564754|ZNF106;nc|ENSG00000103994|Q9H2Y7-2|ZNF106;nc|ENSG00000103994|Q9H2Y7|ZNF106	87.69643885390035	0.07135982304947239	6				NaN	NaN	0	NaN	4107	2793	6895
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6920	21.315	NaN	88597	30	0	18223	0.214	+			3073	ASFQSTSVK	9	83	477.748230306037	953.481907678874	2	477.7477111816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASFQSTSVK_	ENSG00000050405|ENST00000341247|LIMA1;nc|ENSG00000050405|Q9UHB6-2|LIMA1;nc|ENSG00000050405|Q9UHB6-3|LIMA1;nc|ENSG00000050405|Q9UHB6-4|LIMA1;nc|ENSG00000050405|Q9UHB6-5|LIMA1	131.115847015877	0.014647977962315902	6				NaN	NaN	0	NaN	4122	2796	6919
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6921	21.318	NaN	19611	30	0	3197.6	0.106	+			3739	ATAAVTAAVK	10	77	451.7689262461828	901.5232995591656	2	451.7687072753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATAAVTAAVK_	ENSG00000165476|ENST00000373758|REEP3;nc|ENSG00000165476|Q6NUK4-2|REEP3	173.39201167336012	0.002607008819474693	6				NaN	NaN	0	NaN	4123	2796	6919
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6922	21.32	NaN	32777	30	0	8529.2	0.106	+			37821	SMNANTITK	9	83	490.2482779765679	978.4820030199359	2	490.2472229003906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SMNANTITK_	ENSG00000175467|ENST00000312397|SART1	125.68205650279488	0.017759985800556374	6				NaN	NaN	0	NaN	4124	2796	6919
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6923	21.322	NaN	16109	30	0	4419.6	0.106	+			44621	TTEPLPEK	8	69	457.745209169247	913.475865405294	2	457.7449951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TTEPLPEK_	ENSG00000076554|ENST00000518937|TPD52;ENST00000520877.5_1_8:80950353-80963533:-|nuORF;ENST00000521354.5_1_8:80950353-81083761:-|nuORF;ENST00000521618.1_1_8:80950353-80954926:-|nuORF;ENST00000523395.5_1_8:80950353-80963533:-|nuORF;nc|ENSG00000076554|P55327-2|TPD52;nc|ENSG00000076554|P55327-3|TPD52;nc|ENSG00000076554|P55327-5|TPD52;nc|ENSG00000076554|P55327-6|TPD52;nc|ENSG00000076554|P55327-7|TPD52;nc|ENSG00000076554|P55327|TPD52	108.08749611321984	0.24621691167378246	6				NaN	NaN	0	NaN	4125	2796	6919
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6924	21.324	NaN	6947	30	0	1735.6	0.106	+			14806	GTLERGILKK	10	58	372.23629936705976	1113.6870687013793	3	372.23614501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTLERGILKK_	ENSG00000178952|ENST00000313511|TUFM;ENST00000569217.1_1_16:28855425-28855644:-|nuORF	58.2462437865262	0.38179041844353556	6				NaN	NaN	0	NaN	4126	2796	6919
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6925	21.326	NaN	26472	30	0	14686	0.039			+	24027	LEEMVTQACKT	11	82	663.3078210065983	1324.6010890799964	2	663.3076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),Oxidation (M)	_LEEM(Oxidation (M))VTQAC(Carbamidomethyl (C))KT_	REV__ENSG00000113272|ENST00000231198|THG1L	56.43379154798735	0.3552884390983883	6				NaN	NaN	0	NaN	4127	2796	6919
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6926	21.326	NaN	9543.1	30	0	3023.8	0.143	+			13679	GPFFVLCPDHH	11	63	634.7969818660929	1267.5794107989857	2	634.7968139648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GPFFVLCPDHH_	ENSG00000125089|ENST00000245105|SH3TC1;ENST00000515682.5_1_4:8207046-8242679:+|nuORF	42.396135135203025	0.5251566046092361	6				NaN	NaN	0	NaN	4128	2796	6919
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6944	21.364	NaN	246520	30	0	185940	0.169	+			40915	SVFQQGMKNK	10	69	389.53778150676703	1165.591515120501	3	389.53765869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVFQQGMKNK_	ENSG00000018625|ENST00000361216|ATP1A2;ENSG00000105409|ENST00000648268|ATP1A3;ENSG00000163399|ENST00000295598|ATP1A1;ENST00000479960.1_1_1:116943772-116944278:+|nuORF;nc|ENSG00000105409|P13637-2|ATP1A3;nc|ENSG00000105409|P13637-3|ATP1A3;nc|ENSG00000163399|P05023-3|ATP1A1;nc|ENSG00000163399|P05023-4|ATP1A1	82.83050618871818	0.17249597090446123	6				NaN	NaN	0	NaN	4143	2799	6943
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6945	21.367	NaN	42235	30	0	11877	0.106	+			4496	ATITDKEMLKK	11	94	426.57596574692207	1276.7060678409662	3	426.5758361816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATITDKEMLKK_	ANKRD17|p.L2249Yfs*84|1|0.34|ENSG00000132466|chr4:73090884-73090884|G/-|frameshift_variant;ENSG00000132466|ENST00000358602|ANKRD17;ENST00000514252.1_1_4:73978989-74017230:-|nuORF;nc|ENSG00000132466|O75179-2|ANKRD17;nc|ENSG00000132466|O75179-6|ANKRD17;nc|ENSG00000132466|O75179-7|ANKRD17	104.06999374311218	0.052272977646279854	6				NaN	NaN	0	NaN	4144	2799	6943
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6946	21.369	NaN	44724	30	0	12785	0.106				-1	VTCSQVHFK	9	83	369.1867834316002	1104.5385208950006	3	369.1868591308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_VTC(Carbamidomethyl (C))SQVHFK_	ENSG00000174442|ENST00000307897|ZWILCH;nc|ENSG00000174442|Q9H900-2|ZWILCH	36.31764250033197	0.4634519667168888	6				NaN	NaN	0	NaN	4145	2799	6943
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6947	21.371	NaN	14994	30	0	1567.4	0.106	+			12741	GEKVVKTAL	9	72	472.79225496461544	943.5699569960309	2	472.7924499511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEKVVKTAL_	ENSG00000133835|ENST00000510025|HSD17B4;ENST00000511186.5_1_5:118788168-118811542:+|nuORF;ENST00000515235.6_1_5:118788237-118827866:+|nuORF;HSD17B4|p.L703Ifs*15|1|0.06|ENSG00000133835|chr5:119536530-119536531|-/GAAAAATA|frameshift_variant;nc|ENSG00000133835|P51659-2|HSD17B4;nc|ENSG00000133835|P51659-3|HSD17B4	99.01295224348159	0.040209060045561164	6				NaN	NaN	0	NaN	4146	2799	6943
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6948	21.373	NaN	11931	30	0	1217.2	0.106			+	9719	EMRAMWKEGR	10	70	442.5409478503605	1324.6010141512816	3	442.54071044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Oxidation (M)	_EM(Oxidation (M))RAM(Oxidation (M))WKEGR_	REV__ENST00000497424.5_1_20:3906677-3906761:+|nuORF	56.632244143249146	0.3964695498866976	6				NaN	NaN	0	NaN	4147	2799	6943
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6949	21.375	NaN	3815.8	30	0	478.13	0.106	+			17678	IEKPVKEAM	9	71	522.792595845721	1043.570638758242	2	522.7921752929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IEKPVKEAM_	ENSG00000012779|ENST00000374391|ALOX5;nc|ENSG00000012779|P09917-2|ALOX5;nc|ENSG00000012779|P09917-3|ALOX5	75.04331003522576	0.118981335847003	6				NaN	NaN	0	NaN	4148	2799	6943
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6950	21.377	NaN	3459.6	30	0	462.51	0.036	+			50736	YEKDDKLTP	9	65	554.7798746413374	1107.5451963494747	2	554.7801513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YEKDDKLTP_	ENSG00000092820|ENST00000367075|EZR	90.60085204095205	0.06317133949006545	6				NaN	NaN	0	NaN	4149	2799	6943
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6968	21.414	NaN	16481	30	0	3345.9	0.214	+			3304	ASLSPSVSK	9	81	438.24526394293974	874.4759749526795	2	438.2449951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASLSPSVSK_	ENSG00000118689|ENST00000406360|FOXO3;ENST00000395675.4_1_17:18575090-18575600:-|nuORF;nc|ENSG00000118689|O43524-2|FOXO3	88.17693792209575	0.07000514020414955	6				NaN	NaN	0	NaN	4164	2802	6967
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6969	21.418	NaN	8080.4	30	0	566.79	0.106				-1	AMNKDKKE	8	81	490.2482779765679	978.4820030199359	2	490.7518005371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_AM(Oxidation (M))NKDKKE_	DSEL|p.R969Efs*16|1|0.36|ENSG00000171451|chr18:67511734-67511734|T/-|frameshift_variant	40.77816245573522	0.6514838689002179	6				NaN	NaN	0	NaN	4165	2802	6967
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6970	21.42	NaN	8387.6	30	0	1214.5	0.106	+			38542	SSEAPLVQK	9	60	479.76336617700014	957.5121794208003	2	479.7635498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSEAPLVQK_	ENSG00000054654|ENST00000555002|SYNE2;ENST00000557005.1_1_14:64490935-64514966:+|nuORF;nc|ENSG00000054654|Q8WXH0|SYNE2;SYNE2|p.A5240Qfs*5|1|0.07|ENSG00000054654|chr14:64152639-64152639|G/-|frameshift_variant;SYNE2|p.D3074Ffs*8|1|0.07|ENSG00000054654|chr14:64053132-64053133|-/TTTCTTTTTCAAATACTTG|frameshift_variant;SYNE2|p.F2563Ifs*28|1|0.34|ENSG00000054654|chr14:64051593-64051594|-/A|frameshift_variant;SYNE2|p.F2840Lfs*3|1|0.38|ENSG00000054654|chr14:64052427-64052427|T/-|frameshift_variant;SYNE2|p.F4992Lfs*13|1|0.39|ENSG00000054654|chr14:64140067-64140067|T/-|frameshift_variant;SYNE2|p.L5308Ifs*18|1|0.12|ENSG00000054654|chr14:64158750-64158751|GG/-|frameshift_variant;SYNE2|p.S6651Rfs*83|1|0.29|ENSG00000054654|chr14:64220596-64220597|-/G|frameshift_variant	115.49404669440601	0.023927554121326553	6				NaN	NaN	0	NaN	4166	2802	6967
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6971	21.422	NaN	16752	30	0	4978	0.106	+			18910	IVMETGNTK	9	73	496.75652177523006	991.4984906172601	2	496.757568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IVMETGNTK_	ENSG00000171566|ENST00000499023|PLRG1;ENST00000506918.1_1_4:155463230-155466996:-|nuORF;nc|ENSG00000171566|O43660-2|PLRG1	131.61620852596164	0.014413238321579053	6				NaN	NaN	0	NaN	4167	2802	6967
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6972	21.424	NaN	5493.3	30	0	1736.8	0.106				-1	STICKYYQK	9	50	397.53411217660397	1189.580507130012	3	397.5339050292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_STIC(Carbamidomethyl (C))KYYQK_	ENSG00000075975|ENST00000170447|MKRN2	36.446750945000026	0.4619375763483977	6				NaN	NaN	0	NaN	4168	2802	6967
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6973	21.425	NaN	11123	30	0	6407.8	0.033	+			38897	SSPEKAASL	9	56	445.2349796102242	888.4554062872484	2	445.2347106933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSPEKAASL_	ENSG00000125505|ENST00000245615|MBOAT7;nc|ENSG00000125505|Q96N66-2|MBOAT7;nc|ENSG00000125505|Q96N66-3|MBOAT7	49.536043120802724	0.308405419312776	6				NaN	NaN	0	NaN	4169	2802	6967
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6974	21.426	NaN	21061	30	0	3896.1	0.14	+			1345	AETRQPVVI	9	82	506.7929411248485	1011.571329316497	2	506.7927551269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AETRQPVVI_	ENSG00000126106|ENST00000372237|TMEM53	110.11987700582712	0.028875675806141952	6				NaN	NaN	0	NaN	4170	2802	6967
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6992	21.464	NaN	16385	30	0	3456.4	0.214	+			45923	VAQRDPIIAK	10	70	555.8349868986621	1109.6554208641242	2	555.8356323242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VAQRDPIIAK_	ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC;PRKDC|p.K3681Nfs*6|1|0.32|ENSG00000253729|chr8:47785174-47785177|TTCT/-|frameshift_variant;PRKDC|p.M3670*|1|0.5|ENSG00000253729|chr8:47785212-47785212|T/-|frameshift_variant;PRKDC|p.M3846Cfs*12|1|0.13|ENSG00000253729|chr8:47779047-47779047|T/-|frameshift_variant;PRKDC|p.M4020Cfs*2|1|0.31|ENSG00000253729|chr8:47776968-47776968|T/-|frameshift_variant;PRKDC|p.N3605Kfs*3|1|0.22|ENSG00000253729|chr8:47788993-47788994|-/T|frameshift_variant;PRKDC|p.N4037Ifs*15|1|0.17|ENSG00000253729|chr8:47776916-47776916|T/-|frameshift_variant;PRKDC|p.S3402Ifs*16|1|0.04|ENSG00000253729|chr8:47799302-47799303|-/AAACCGTGAGTTAGAGGAGGTAA|frameshift_variant;PRKDC|p.S4099Qfs*6|1|0.25|ENSG00000253729|chr8:47774265-47774265|A/-|frameshift_variant;PRKDC|p.T3268Pfs*7|1|0.5|ENSG00000253729|chr8:47803426-47803426|T/-|frameshift_variant;PRKDC|p.W3401Cfs*4|1|0.01|ENSG00000253729|chr8:47799304-47799305|-/AATGAATA|frameshift_variant	68.84614121027924	0.2867470276772903	6				NaN	NaN	0	NaN	4185	2805	6991
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6993	21.468	NaN	12950	30	0	1868.8	0.106				-1	 	0	52	379.7241163938622	757.4336798545244	2	379.72393798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4186	2805	6991
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6994	21.47	NaN	10635	30	0	1611.6	0.106	+			21647	KPTVDLAHT	9	78	491.2720586876006	980.5295644420012	2	491.2717590332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KPTVDLAHT_	ZC3H6|p.K443T|2|0.25|ENSG00000188177|chr2:112322890-112322890|A/C|missense_variant	51.33545320467046	0.2872990594074956	6				NaN	NaN	0	NaN	4187	2805	6991
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6995	21.472	NaN	3644.6	30	0	390.69	0.106			+	31680	QNKKKLAN	8	63	472.2872600383969	NaN	0	472.287353515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QNKKKLAN_	REV__ENSG00000116731|ENST00000311066|PRDM2;REV__nc|ENSG00000116731|Q13029-2|PRDM2;REV__nc|ENSG00000116731|Q13029-3|PRDM2;REV__nc|ENSG00000116731|Q13029-5|PRDM2;REV__PRDM2|p.P1648Qfs*14|1|0.24|ENSG00000116731|chr1:13782731-13782731|G/-|frameshift_variant	60.29395666154354	1.7418937515398478	6				NaN	NaN	0	NaN	4188	2805	6991
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6996	21.474	NaN	8764.6	30	0	1414.1	0.106	+			44342	TSGPTTPLK	9	65	451.2529700708769	900.4913872085539	2	451.2528991699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TSGPTTPLK_	ENSG00000188112|ENST00000341865|C6orf132	95.81516180277367	0.04847050768394289	6				NaN	NaN	0	NaN	4189	2805	6991
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6997	21.475	NaN	3930.5	30	0	479.14	0.034			+	26291	LSTYARSY	8	69	480.74305858219344	959.4715642311869	2	480.7426452636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSTYARSY_	REV__nc|ENSG00000109790|Q96PQ7-2|KLHL5;REV__nc|ENSG00000109790|Q96PQ7-3|KLHL5;REV__nc|ENSG00000109790|Q96PQ7-4|KLHL5;REV__nc|ENSG00000109790|Q96PQ7|KLHL5	51.33545320467046	0.5859736979383976	6				NaN	NaN	0	NaN	4190	2805	6991
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6998	21.476	NaN	5594.3	30	0	1165.5	0.139			+	7166	DAGFKNSAK	9	59	469.24048542206515	936.4664179109303	2	469.7352294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DAGFKNSAK_	REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-13|TTN;REV__nc|ENSG00000155657|Q8WZ42-2|TTN;REV__nc|ENSG00000155657|Q8WZ42-4|TTN;REV__nc|ENSG00000155657|Q8WZ42-5|TTN;REV__nc|ENSG00000155657|Q8WZ42-7|TTN;REV__nc|ENSG00000155657|Q8WZ42-8|TTN;REV__nc|ENSG00000155657|Q8WZ42|TTN;REV__TTN|p.A12650Gfs*4|1|0.4|ENSG00000155657|chr2:178633489-178633490|-/T|frameshift_variant;REV__TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;REV__TTN|p.A7105Cfs*8|1|0.32|ENSG00000155657|chr2:178722523-178722524|-/A|frameshift_variant;REV__TTN|p.D20259Rfs*40|1|0.44|ENSG00000155657|chr2:178583105-178583106|-/T|frameshift_variant;REV__TTN|p.D21555Ifs*6|1|0.33|ENSG00000155657|chr2:178576659-178576659|G/-|frameshift_variant;REV__TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;REV__TTN|p.D9026Afs*9|1|0.26|ENSG00000155657|chr2:178711205-178711208|CTGT/-|frameshift_variant;REV__TTN|p.E15132Sfs*22|1|0.27|ENSG00000155657|chr2:178612094-178612094|C/-|frameshift_variant;REV__TTN|p.E20392Dfs*6|1|0.04|ENSG00000155657|chr2:178582357-178582358|-/TTTAAAATTA|frameshift_variant;REV__TTN|p.E20392Kfs*4|1|0.02|ENSG00000155657|chr2:178582359-178582360|-/TTTT|frameshift_variant;REV__TTN|p.E9224Gfs*8|1|0.04|ENSG00000155657|chr2:178709697-178709698|-/TCTTATGATATCTTGAC|frameshift_variant;REV__TTN|p.F18705Lfs*8|1|0.37|ENSG00000155657|chr2:178590687-178590687|A/-|frameshift_variant;REV__TTN|p.G12742Vfs*2|1|0.05|ENSG00000155657|chr2:178632983-178632983|C/-|frameshift_variant;REV__TTN|p.G14712Dfs*11|1|0.37|ENSG00000155657|chr2:178614341-178614341|G/-|frameshift_variant;REV__TTN|p.G19920Afs*12|1|0.42|ENSG00000155657|chr2:178584961-178584961|G/-|frameshift_variant;REV__TTN|p.G22029Efs*22|2|0.13|ENSG00000155657|chr2:178575125-178575125|T/-|frameshift_variant;REV__TTN|p.I10495Nfs*4|1|0.37|ENSG00000155657|chr2:178685288-178685289|-/T|frameshift_variant;REV__TTN|p.I24998Nfs*2|1|0.35|ENSG00000155657|chr2:178566216-178566217|-/T|frameshift_variant;REV__TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;REV__TTN|p.I9225Cfs*34|1|0.06|ENSG00000155657|chr2:178709695-178709696|-/ATATCCATGAGCA|frameshift_variant;REV__TTN|p.K10923Rfs*104|2|0.23|ENSG00000155657|chr2:178679362-178679362|T/-|frameshift_variant;REV__TTN|p.K11381Nfs*25|1|0.07|ENSG00000155657|chr2:178671133-178671133|T/-|frameshift_variant;REV__TTN|p.K11556Sfs*15|1|0.39|ENSG00000155657|chr2:178652287-178652287|T/-|frameshift_variant;REV__TTN|p.K14271Qfs*5|1|0.02|ENSG00000155657|chr2:178617351-178617352|-/G|frameshift_variant;REV__TTN|p.K26626Nfs*34|1|0.34|ENSG00000155657|chr2:178561331-178561331|T/-|frameshift_variant;REV__TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;REV__TTN|p.K4988Ifs*4|1|0.06|ENSG00000155657|chr2:178733381-178733382|-/GAAAATGATG|frameshift_variant;REV__TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;REV__TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant;REV__TTN|p.L7142*|1|0.06|ENSG00000155657|chr2:178722407-178722411|TCTTA/-|frameshift_variant;REV__TTN|p.N13487Tfs*49|1|0.34|ENSG00000155657|chr2:178621335-178621335|T/-|frameshift_variant;REV__TTN|p.N15496Ifs*16|1|0.09|ENSG00000155657|chr2:178610116-178610116|T/-|frameshift_variant;REV__TTN|p.N6458Mfs*74|1|0.44|ENSG00000155657|chr2:178725998-178725998|T/-|frameshift_variant;REV__TTN|p.N7648Tfs*27|1|0.32|ENSG00000155657|chr2:178719598-178719598|T/-|frameshift_variant;REV__TTN|p.N8964Tfs*27|1|0.11|ENSG00000155657|chr2:178711988-178711988|T/-|frameshift_variant;REV__TTN|p.P16126Rfs*3|1|0.25|ENSG00000155657|chr2:178607301-178607302|TG/-|frameshift_variant;REV__TTN|p.P22810Hfs*10|1|0.03|ENSG00000155657|chr2:178572780-178572781|-/AAAT|frameshift_variant;REV__TTN|p.S5235Hfs*25|1|0.06|ENSG00000155657|chr2:178732315-178732316|-/ATATATG|frameshift_variant;REV__TTN|p.V10632Yfs*16|1|0.16|ENSG00000155657|chr2:178683254-178683254|T/-|frameshift_variant;REV__TTN|p.V11008Sfs*13|1|0.33|ENSG00000155657|chr2:178678146-178678147|-/T|frameshift_variant;REV__TTN|p.V11345Ffs*4|1|0.4|ENSG00000155657|chr2:178672044-178672044|T/-|frameshift_variant;REV__TTN|p.V13823*|1|0.28|ENSG00000155657|chr2:178620027-178620027|C/-|frameshift_variant;REV__TTN|p.V22573Cfs*4|2|0.31|ENSG00000155657|chr2:178573492-178573492|C/-|frameshift_variant;REV__TTN|p.V27442Cfs*4|1|0.05|ENSG00000155657|chr2:178558107-178558108|-/A|frameshift_variant;REV__TTN|p.W5728Mfs*3|1|0.07|ENSG00000155657|chr2:178730267-178730268|-/T|frameshift_variant	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	4191	2805	6991
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7016	21.515	NaN	18294	30	0	3332.3	0.214	+			22991	KVSDINISK	9	78	502.29302188793207	1002.5714908426642	2	502.29254150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVSDINISK_	ENSG00000138193|ENST00000371380|PLCE1;PLCE1|p.A1544Pfs*9|1|0.07|ENSG00000138193|chr10:94273681-94273681|A/-|frameshift_variant;PLCE1|p.E2087Gfs*37|1|0.1|ENSG00000138193|chr10:94316672-94316676|AGAAG/-|frameshift_variant;PLCE1|p.P70Dfs*7|1|0.06|ENSG00000138193|chr10:94031253-94031254|-/GA|frameshift_variant;PLCE1|p.P70Lfs*8|1|0.04|ENSG00000138193|chr10:94031254-94031255|-/TAACA|frameshift_variant	121.28727682496555	0.020420476360295158	6				NaN	NaN	0	NaN	4206	2808	7015
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7017	21.519	NaN	89305	30	0	20528	0.106	+			4130	ATEHLSTLSEK	11	96	405.87885569781247	1214.6147376936374	3	405.87860107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATEHLSTLSEK_	ENSG00000118137|ENST00000236850|APOA1	79.48907831485694	0.15663227531959176	6				NaN	NaN	0	NaN	4207	2808	7015
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7018	21.521	NaN	28045	30	0	8532.8	0.106	+			5059	ATSGVVAVR	9	69	430.25341555536716	858.4922781775343	2	430.2531433105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATSGVVAVR_	ENSG00000074054|ENST00000696935|CLASP1;nc|ENSG00000074054|Q7Z460-2|CLASP1;nc|ENSG00000074054|Q7Z460-3|CLASP1;nc|ENSG00000074054|Q7Z460-4|CLASP1;nc|ENSG00000074054|Q7Z460-5|CLASP1;nc|ENSG00000074054|Q7Z460|CLASP1	190.51785368661015	0.00024017880420896124	6				NaN	NaN	0	NaN	4208	2808	7015
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7019	21.523	NaN	4132.4	30	0	1085.1	0.106	+			45323	TVSESGTATLK	11	56	547.2905437454491	1092.566534557698	2	547.2906494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TVSESGTATLK_	ENSG00000188112|ENST00000341865|C6orf132;nc|nan|Q5T0Z8-2|C6orf132;nc|nan|Q5T0Z8-4|C6orf132	86.88156770896713	0.11154061753057586	6				NaN	NaN	0	NaN	4209	2808	7015
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7020	21.525	NaN	11346	30	0	2311	0.106	+			30222	PSSHPVSLN	9	66	469.24048542206515	936.4664179109303	2	469.240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PSSHPVSLN_	ENSG00000114423|ENST00000394030|CBLB;nc|ENSG00000114423|Q13191-2|CBLB;nc|ENSG00000114423|Q13191-3|CBLB	52.936696900407355	0.27249468807391813	6				NaN	NaN	0	NaN	4210	2808	7015
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7021	21.526	NaN	5124.8	30	0	2304	0.037	+			31283	QICDTYNQK	9	66	585.2662453922869	1168.5179378513737	2	585.2665405273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_QIC(Carbamidomethyl (C))DTYNQK_	ENSG00000165175|ENST00000614558|MID1IP1	98.62937762414208	0.04060045538121712	6				NaN	NaN	0	NaN	4211	2808	7015
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7022	21.527	NaN	23162	30	0	4765.5	0.145	+			37014	SIQHVFIKK	9	87	367.2256031201265	1098.6549799605796	3	367.22552490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SIQHVFIKK_	ENSG00000128731|ENST00000261609|HERC2	63.53385203322761	0.18415635464017938	6				NaN	NaN	0	NaN	4212	2808	7015
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7040	21.564	NaN	10413	30	0	1737.4	0.214	+			887	AEHIESRTL	9	71	528.2777418184041	1054.5409307036082	2	528.2780151367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEHIESRTL_	ENSG00000147872|ENST00000276914|PLIN2;PLIN2|p.V348*|1|0.15|ENSG00000147872|chr9:19116520-19116520|C/-|frameshift_variant	51.19269402634007	0.2889735674168909	6				NaN	NaN	0	NaN	4227	2811	7039
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7041	21.568	NaN	8744.3	30	0	1292.1	0.106	+			34156	RSYSSVIEK	9	77	534.7878233601805	1067.5610937871609	2	534.7882690429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RSYSSVIEK_	ENSG00000142197|ENST00000691173|DOP1B;nc|ENSG00000142197|Q9Y3R5-2|DOP1B	93.5975768576971	0.05472259948179787	6				NaN	NaN	0	NaN	4228	2811	7039
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7042	21.57	NaN	9633.5	30	0	2308.9	0.106	+			32673	RADRLLAA	8	77	443.2669451481633	884.5193373631266	2	443.2668151855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RADRLLAA_	ENSG00000148572|ENST00000277746|NRBF2;nc|ENSG00000148572|Q96F24-2|NRBF2	51.33545320467046	0.5859736979383976	6				NaN	NaN	0	NaN	4229	2811	7039
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7043	21.572	NaN	7595.4	30	0	2112	0.106				-1	 	0	66	477.22634572545263	952.4381385177053	2	477.22613525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4230	2811	7039
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7044	21.574	NaN	11137	30	0	2625.1	0.106	+			43434	TGLEVWTERDR	11	56	454.5660374892318	NaN	0	454.5660095214844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TGLEVWTERDR_	ADAM33|p.A455Pfs*14|1|0.31|ENSG00000149451|chr20:3672575-3672575|C/-|frameshift_variant;ENSG00000149451|ENST00000356518|ADAM33;nc|ENSG00000149451|Q9BZ11-2|ADAM33	56.632244143249146	0.2651969005282388	6				NaN	NaN	0	NaN	4231	2811	7039
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7045	21.576	NaN	7490.5	30	0	1762.7	0.106	+			38430	SSAKPGPAL	9	68	414.23494105947657	826.4553291857532	2	414.2347717285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSAKPGPAL_	ENSG00000186260|ENST00000571589|MRTFB;nc|ENSG00000186260|Q9ULH7-2|MRTFB;nc|ENSG00000186260|Q9ULH7-3|MRTFB;nc|ENSG00000186260|Q9ULH7-4|MRTFB;nc|ENSG00000186260|Q9ULH7|MRTFB	71.87747018426188	0.13267044672804276	6				NaN	NaN	0	NaN	4232	2811	7039
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7046	21.577	NaN	5083.1	30	0	1127.6	0.034			+	24815	LIQNNIEL	8	65	478.77425791276085	955.5339628923217	2	478.77423095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LIQNNIEL_	REV__ENSG00000132849|ENST00000642238|PATJ;REV__ENST00000459752.5_1_1:62228564-62579919:+|nuORF;REV__ENST00000484562.5_1_1:62228564-62579919:+|nuORF;REV__nc|ENSG00000132849|Q8NI35-2|PATJ;REV__nc|ENSG00000132849|Q8NI35-3|PATJ;REV__nc|ENSG00000132849|Q8NI35-4|PATJ;REV__nc|ENSG00000132849|Q8NI35-5|PATJ;REV__nc|ENSG00000132849|Q8NI35|PATJ	58.78195531508484	0.5138399468736706	6				NaN	NaN	0	NaN	4233	2811	7039
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7064	21.614	NaN	298810	30	0	197280	0.184	+			1817	AIFQGKLEKK	10	96	387.90462667613184	1160.6920506285956	3	387.9043884277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AIFQGKLEKK_	ENSG00000118322|ENST00000327245|ATP10B	96.66504779109242	0.09291513985748291	6				NaN	NaN	0	NaN	4248	2814	7063
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7065	21.617	NaN	26447	30	0	5928.5	0.106	+			4900	ATQGATEIVK	10	79	509.2822614492127	1016.5499699652254	2	509.2822570800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATQGATEIVK_	ENSG00000104321|ENST00000262209|TRPA1;TRPA1|p.G505Rfs*7|1|0.38|ENSG00000104321|chr8:72055452-72055453|-/T|frameshift_variant;TRPA1|p.L1023Ffs*15|1|0.42|ENSG00000104321|chr8:72023894-72023895|-/A|frameshift_variant;TRPA1|p.N377Ifs*25|1|0.08|ENSG00000104321|chr8:72056981-72056982|-/AAACTAATTTTGTTTATTA|frameshift_variant;TRPA1|p.T673Hfs*23|1|0.45|ENSG00000104321|chr8:72046557-72046557|T/-|frameshift_variant;TRPA1|p.Y327*|1|0.36|ENSG00000104321|chr8:72059399-72059402|TAAA/-|frameshift_variant	214.7054972689771	7.465405871342228E-10	6				NaN	NaN	0	NaN	4249	2814	7063
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7066	21.619	NaN	12297	30	0	1036.1	0.106	+			49241	VVNKVPLTGK	10	86	527.8347059956968	1053.6548590581936	2	527.834716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVNKVPLTGK_	ENSG00000151135|ENST00000280756|TMEM263	91.26522074875469	0.12383023862516404	6				NaN	NaN	0	NaN	4250	2814	7063
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7067	21.621	NaN	4248.3	30	0	507.8	0.106	+			8436	EAREEKVVY	9	67	561.7929584395362	1121.5713639458722	2	561.79345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EAREEKVVY_	ENSG00000253276|ENST00000523505|CCDC71L;nc|ENSG00000253276|Q8N9Z2-2|CCDC71L	84.9155231211612	0.07920012719736333	6				NaN	NaN	0	NaN	4251	2814	7063
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7068	21.622	NaN	8025.1	30	0	557.71	0.106			+	-1	QGWQMLMHTFQ	11	80	474.88302239181166	NaN	0	474.8829650878906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_QGWQM(Oxidation (M))LMHTFQ_	REV__ENSG00000130508|ENST00000252804|PXDN;REV__PXDN|p.C857Afs*5|2|0.33|ENSG00000130508|chr2:1649212-1649212|G/-|frameshift_variant;REV__PXDN|p.E1339Lfs*66|1|0.26|ENSG00000130508|chr2:1639361-1639362|-/AG|frameshift_variant;REV__PXDN|p.N1190Mfs*12|1|0.22|ENSG00000130508|chr2:1648211-1648211|T/-|frameshift_variant;REV__PXDN|p.N1194Tfs*8|1|0.25|ENSG00000130508|chr2:1648199-1648199|T/-|frameshift_variant;REV__PXDN|p.N865Mfs*25|3|0.42|ENSG00000130508|chr2:1649188-1649188|G/-|frameshift_variant;REV__PXDN|p.R1242Pfs*22|1|0.07|ENSG00000130508|chr2:1644636-1644637|-/AG|frameshift_variant	39.873155843976775	0.387718248623866	6				NaN	NaN	0	NaN	4252	2814	7063
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7069	21.624	NaN	9894.1	30	0	1335.9	0.106			+	26239	LSSQSVVEK	9	71	488.76919256318837	975.5238321931768	2	488.76885986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSSQSVVEK_	REV__nc|ENSG00000012660|Q9NYP7-3|ELOVL5	93.1432384553994	0.056003526918089595	6				NaN	NaN	0	NaN	4253	2814	7063
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7070	21.626	NaN	1876	30	0	324	0.035			+	47614	VRYRTSPQ	8	57	503.7743225097656	NaN	0	503.7743225097656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VRYRTSPQ_	REV__ENSG00000161270|ENST00000378910|NPHS1;REV__nc|ENSG00000161270|O60500-2|NPHS1;REV__NPHS1|p.S1186Vfs*10|1|0.44|ENSG00000161270|chr19:35830883-35830884|-/G|frameshift_variant	40.77816245573522	1.7418937515398478	6				NaN	NaN	0	NaN	4254	2814	7063
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7088	21.664	NaN	74746	30	0	18735	0.214	+			39693	STIKFQMKK	9	90	370.88272209527474	1109.6263368860243	3	370.88275146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STIKFQMKK_	ENSG00000198755|ENST00000322203|RPL10A;ENST00000464112.5_1_6:35436546-35438524:+|nuORF;ENST00000472730.1_1_3:61728131-61728755:-|nuORF;ENST00000478340.2_1_6:35437033-35438524:+|nuORF	98.58198989935565	0.04066992115528678	6				NaN	NaN	0	NaN	4269	2817	7087
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7089	21.667	NaN	21865	30	0	3610.8	0.106	+			16152	HEAEPVRTL	9	75	526.2799775777855	1050.545402222371	2	526.2803344726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HEAEPVRTL_	ENSG00000177311|ENST00000321464|ZBTB38	104.0567914643314	0.03506238181059741	6				NaN	NaN	0	NaN	4270	2817	7087
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7090	21.669	NaN	28459	30	0	5083.3	0.106	+			15294	GTVDCVQAR	9	84	474.73160144698846	947.448649960777	2	474.7315673828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTVDCVQAR_	ENSG00000150593|ENST00000280154|PDCD4;ENST00000489049.5_1_10:112647518-112650449:+|nuORF;nc|ENSG00000150593|Q53EL6-2|PDCD4	109.47833844074708	0.029530294723441826	6				NaN	NaN	0	NaN	4271	2817	7087
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7091	21.671	NaN	4619.2	30	0	788.67	0.106	+			23110	KVVKVTIMK	9	68	523.3437441120034	1044.6729352908067	2	523.3440551757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KVVKVTIMK_	ENSG00000139168|ENST00000266529|ZCRB1;ZCRB1|p.K141Efs*4|1|0.29|ENSG00000139168|chr12:42313900-42313901|-/T|frameshift_variant;ZCRB1|p.W185Mfs*13|2|0.39|ENSG00000139168|chr12:42313168-42313169|-/T|frameshift_variant	99.78786539795823	0.03941834715970116	6				NaN	NaN	0	NaN	4272	2817	7087
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7092	21.673	NaN	2843.4	30	0	271.73	0.106	+			20595	KGAFAKVKE	9	53	489.2925048264375	976.570456719675	2	489.2925109863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KGAFAKVKE_	ENSG00000173548|ENST00000308527|SNX33	58.78195531508484	0.22376836668196862	6				NaN	NaN	0	NaN	4273	2817	7087
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7093	21.675	NaN	2030.9	30	0	165.6	0.034			+	50975	YIKNKKGD	8	62	483.2743557844298	964.5341586356597	2	483.2740173339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YIKNKKGD_	REV__ENSG00000136504|ENST00000259021|KAT7;REV__ENST00000444292.2_1_X:95228575-95229244:-|nuORF;REV__ENST00000512616.5_1_17:47892935-47904861:+|nuORF;REV__ENST00000513980.5_1_17:47892935-47904861:+|nuORF;REV__KAT7|p.V504Lfs*14|1|0.35|ENSG00000136504|chr17:49826024-49826024|A/-|frameshift_variant;REV__nc|ENSG00000136504|O95251-2|KAT7;REV__nc|ENSG00000136504|O95251-3|KAT7;REV__nc|ENSG00000136504|O95251-4|KAT7;REV__nc|ENSG00000136504|O95251-5|KAT7	31.954861631926434	0.7126016770032289	6				NaN	NaN	0	NaN	4274	2817	7087
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7094	21.675	NaN	1544.3	30	0	233.76	0.143	+			19288	KAFTSSTTLTK	11	50	592.8297038320095	1183.644854730819	2	592.829833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KAFTSSTTLTK_	ENSG00000182903|ENST00000511833|ZNF721;ENSG00000182903|ENST00000511833|ZNF721;nc|ENSG00000182903|Q8TF20|ZNF721;nc|ENSG00000182903|Q8TF20|ZNF721	79.07001860377117	0.16012584326255155	6				NaN	NaN	0	NaN	4275	2817	7087
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7112	21.715	NaN	36386	30	0	10639	0.214	+			2584	AQFGGKILRK	10	68	373.23291006780306	1116.6769008036092	3	373.2328186035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AQFGGKILRK_	ENSG00000070047|ENST00000264555|PHRF1;nc|ENSG00000070047|Q9P1Y6-2|PHRF1;nc|ENSG00000070047|Q9P1Y6-3|PHRF1;PHRF1|p.E1225Kfs*62|1|0.36|ENSG00000070047|chr11:609125-609125|G/-|frameshift_variant;PHRF1|p.L1393Cfs*8|1|0.38|ENSG00000070047|chr11:609628-609628|C/-|frameshift_variant;PHRF1|p.P938Qfs*23|2|0.45|ENSG00000070047|chr11:608263-608263|C/-|frameshift_variant;PHRF1|p.T1126Pfs*73|1|0.36|ENSG00000070047|chr11:608827-608827|C/-|frameshift_variant	30.317721548370564	0.6322445173429027	6				NaN	NaN	0	NaN	4290	2820	7111
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7113	21.718	NaN	22716	30	0	6788.9	0.106	+			27392	MKMLKVQLK	9	65	384.22804023525873	1149.6622913059762	3	384.22784423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Oxidation (M)	_M(Oxidation (M))KM(Oxidation (M))LKVQLK_	CELF6|p.R466M|1|0.27|ENSG00000140488|chr15:72287314-72287314|C/A|missense_variant	69.6276240434122	0.14239879520340665	6				NaN	NaN	0	NaN	4291	2820	7111
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7114	21.72	NaN	3725.6	30	0	439.25	0.106	+			34439	RTVPVGGVVK	10	71	506.3190533308879	1010.6235537285759	2	506.3190002441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RTVPVGGVVK_	ENSG00000261236|ENST00000569669|BOP1;nc|ENSG00000261236|Q14137-2|BOP1	50.033510581677724	0.4566913063131936	6				NaN	NaN	0	NaN	4292	2820	7111
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7115	21.722	NaN	3059.8	30	0	285.91	0.106	+			22626	KTVDGALVAAK	11	71	536.8218440867146	1071.629135240229	2	536.822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTVDGALVAAK_	ENST00000461436.1_1_3:152017982-152019737:+|nuORF	50.79123845855914	0.4102859592092987	6				NaN	NaN	0	NaN	4293	2820	7111
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7116	21.724	NaN	10814	30	0	1978.8	0.106	+			11494	FPASSGVSH	9	74	444.7141316805738	887.4137104279476	2	444.71405029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FPASSGVSH_	ENSG00000160294|ENST00000291688|MCM3AP;MCM3AP|p.K492Efs*5|1|0.29|ENSG00000160294|chr21:46280545-46280546|-/C|frameshift_variant	94.00642277110589	0.05356993013874309	6				NaN	NaN	0	NaN	4294	2820	7111
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7117	21.726	NaN	7047.6	30	0	1471	0.034	+			48668	VTSSVSTLK	9	70	461.26609396118687	920.5176349891738	2	461.2658386230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTSSVSTLK_	ENSG00000186260|ENST00000571589|MRTFB;nc|ENSG00000186260|Q9ULH7-4|MRTFB;nc|ENSG00000186260|Q9ULH7|MRTFB	80.45461616416974	0.09558281504443908	6				NaN	NaN	0	NaN	4295	2820	7111
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7118	21.726	NaN	7591.7	30	0	1246.3	0.137			+	3228	ASLAQVAAL	9	59	422.25029240369173	842.4860318741835	2	422.2502746582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASLAQVAAL_	REV__ENST00000526926.5_1_8:144718207-144732076:+|nuORF	58.78195531508484	0.22376836668196862	6				NaN	NaN	0	NaN	4296	2820	7111
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7136	21.766	NaN	31756	30	0	9984.7	0.214	+			32988	REELGRLA	8	87	472.2694801309078	942.5244073286157	2	472.269287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_REELGRLA_	ENSG00000163661|ENST00000295927|PTX3	56.72105179125745	0.5342425954139568	6				NaN	NaN	0	NaN	4311	2823	7135
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7137	21.769	NaN	8383.5	30	0	4915.7	0.106			+	45370	TVTEKKIR	8	38	325.53798434060303	973.5921236220091	3	325.5378723144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVTEKKIR_	REV__ENST00000481894.1_1_1:115138166-115167938:-|nuORF	42.396135135203025	0.6414440140393314	6				NaN	NaN	0	NaN	4312	2823	7135
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7138	21.771	NaN	8498.3	30	0	1324.5	0.106	+			5362	ATWATKELRK	10	52	401.89986720310145	1202.6777722095044	3	401.8995361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATWATKELRK_	ENSG00000108424|ENST00000290158|KPNB1;nc|ENSG00000108424|Q14974-2|KPNB1	27.047317107675042	0.6589519614906109	6				NaN	NaN	0	NaN	4313	2823	7135
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7139	21.773	NaN	29459	30	0	3567.8	0.106	+			44847	TTTGHLIYK	9	75	517.2874223885534	1032.5602918439067	2	517.2875366210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TTTGHLIYK_	EEF1A1|p.P263Lfs*27|1|0.36|ENSG00000156508|chr6:73518595-73518595|G/-|frameshift_variant;EEF1A2|p.T239Hfs*50|1|0.26|ENSG00000101210|chr20:63493194-63493195|-/G|frameshift_variant;EEF1A2|p.T239Rfs*40|1|0.31|ENSG00000101210|chr20:63493195-63493195|G/-|frameshift_variant;ENSG00000101210|ENST00000217182|EEF1A2;ENSG00000156508|ENST00000309268|EEF1A1;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	110.11987700582712	0.028875675806141952	6				NaN	NaN	0	NaN	4314	2823	7135
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7140	21.775	NaN	4750.3	30	0	790.71	0.106	+			35777	SEADSHCL	8	73	431.17389495777985	860.3332369823597	2	431.1736755371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SEADSHCL_	ENSG00000198788|ENST00000675028|MUC2;nc|ENSG00000198788|Q02817|MUC2	47.91560031466742	0.6071945918984287	6				NaN	NaN	0	NaN	4315	2823	7135
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7141	21.777	NaN	3970.2	30	0	749.95	0.044			+	50156	WKKYYQRRFKL	11	58	539.3127761156129	1614.9164989470387	3	539.3131713867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_WKKYYQRRFKL_	REV__ENSG00000185875|ENST00000376356|THNSL1	10.10389549528425	0.8231785578855622	6				NaN	NaN	0	NaN	4316	2823	7135
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7142	21.778	NaN	4507.1	30	0	1056.9	0.139	+			26829	LVTEPSGPK	9	59	464.2608811187514	926.5072093043028	2	464.26068115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LVTEPSGPK_	ENST00000355300.6_1_15:77908241-77924773:-|nuORF	39.252832667884924	0.4290233611298554	6				NaN	NaN	0	NaN	4317	2823	7135
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7160	21.817	NaN	26348	30	0	4539.6	0.208	+			1024	AEKLGGSAV	9	89	416.231999574011	830.449446214822	2	416.23187255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEKLGGSAV_	ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65622809-65623088:-|nuORF	101.45984612302182	0.0377122763612125	6				NaN	NaN	0	NaN	4332	2826	7159
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7161	21.82	NaN	192060	30	0	24714	0.106				-1	 	0	88	565.9148370159179	1694.7226816479536	3	565.91552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4333	2826	7159
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7162	21.823	NaN	7994.3	30	0	2182	0.106				-1	 	0	49	379.7241163938622	757.4336798545244	2	379.7239074707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4334	2826	7159
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7163	21.824	NaN	5113.9	30	0	489.9	0.106	+			41937	SVVQSGQLK	9	65	473.2718131151851	NaN	0	473.27142333984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVVQSGQLK_	ENGASE|p.S611Gfs*22|1|0.26|ENSG00000167280|chr17:79085943-79085950|CTGCCAGC/-|frameshift_variant;ENGASE|p.T547Hfs*45|1|0.16|ENSG00000167280|chr17:79085274-79085275|-/C|frameshift_variant;ENGASE|p.T547Pfs*14|2|0.35|ENSG00000167280|chr17:79085275-79085275|C/-|frameshift_variant;ENSG00000167280|ENST00000579016|ENGASE;nc|ENSG00000167280|Q8NFI3-2|ENGASE;nc|ENSG00000167280|Q8NFI3-3|ENGASE	53.08895987439943	0.18540527177656715	6				NaN	NaN	0	NaN	4335	2826	7159
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7164	21.826	NaN	99746	30	0	34781	0.106			+	1634	AGNKKIEK	8	118	444.2689064906234	886.5232600480468	2	444.26837158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AGNKKIEK_	REV__ENSG00000197386|ENST00000355072|HTT;REV__HTT|p.H2238Ffs*6|1|0.28|ENSG00000197386|chr4:3212643-3212644|CA/-|frameshift_variant;REV__HTT|p.N699Mfs*9|2|0.17|ENSG00000197386|chr4:3131390-3131390|A/-|frameshift_variant;REV__HTT|p.P1176Lfs*3|1|0.18|ENSG00000197386|chr4:3154316-3154316|C/-|frameshift_variant;REV__HTT|p.P2413Hfs*44|1|0.6|ENSG00000197386|chr4:3217944-3217944|C/-|frameshift_variant	120.62098272573253	0.23366758524054274	6				NaN	NaN	0	NaN	4336	2826	7159
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7165	21.828	NaN	7694	30	0	1453.5	0.033	+			39022	SSSGTVLSK	9	66	433.23486490325786	864.4551768733157	2	433.234619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSSGTVLSK_	ENSG00000145362|ENST00000357077|ANK2	85.16082228582465	0.07850854922700509	6				NaN	NaN	0	NaN	4337	2826	7159
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7166	21.828	NaN	6619	30	0	1521.1	0.139			+	40677	SVASKEAPK	9	60	458.75837073573496	915.5021885382699	2	458.7581481933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVASKEAPK_	REV__ENSG00000163125|ENST00000369068|RPRD2;REV__ENST00000492220.1_1_1:150381497-150445807:+|nuORF;REV__nc|ENSG00000163125|Q5VT52-2|RPRD2;REV__nc|ENSG00000163125|Q5VT52-3|RPRD2;REV__nc|ENSG00000163125|Q5VT52-5|RPRD2;REV__RPRD2|p.G1389Efs*24|1|0.39|ENSG00000163125|chr1:150473110-150473110|G/-|frameshift_variant;REV__RPRD2|p.L1399Wfs*14|2|0.26|ENSG00000163125|chr1:150473136-150473136|C/-|frameshift_variant;REV__RPRD2|p.P1275Lfs*138|1|0.15|ENSG00000163125|chr1:150472768-150472768|C/-|frameshift_variant;REV__RPRD2|p.P733Hfs*4|1|0.43|ENSG00000163125|chr1:150471145-150471146|CC/-|frameshift_variant;REV__RPRD2|p.P772Lfs*42|2|0.19|ENSG00000163125|chr1:150471259-150471259|C/-|frameshift_variant;REV__RPRD2|p.T1353Pfs*60|1|0.13|ENSG00000163125|chr1:150473001-150473001|C/-|frameshift_variant	51.19269402634007	0.2889735674168909	6				NaN	NaN	0	NaN	4338	2826	7159
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7186	21.865	NaN	15340	30	0	5837.7	0.214	+			6209	AVQRTLLEK	9	48	353.216877961942	1056.628804486026	3	353.21685791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVQRTLLEK_	ENSG00000002586|ENST00000381192|CD99;ENST00000381177.6_1_X:2656215-2658842:+|nuORF;nc|ENSG00000292348|P14209-3|CD99	42.86426827375447	0.38666266728046506	6				NaN	NaN	0	NaN	4355	2829	7185
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7187	21.868	NaN	16556	30	0	6060.7	0.106	+			15229	GTSSVIVSR	9	63	453.2559943368937	904.4974357405874	2	453.25579833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTSSVIVSR_	ENSG00000072803|ENST00000517395|FBXW11;nc|ENSG00000072803|Q9UKB1-2|FBXW11;nc|ENSG00000072803|Q9UKB1-3|FBXW11;nc|ENSG00000072803|Q9UKB1|FBXW11	96.0336014099291	0.047854655524928534	6				NaN	NaN	0	NaN	4356	2829	7185
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7188	21.87	NaN	7987.2	30	0	1703.3	0.106	+			18723	ITGPNMGGK	9	61	437.7260603356038	873.4375677380076	2	437.7259521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ITGPNMGGK_	ENSG00000095002|ENST00000233146|MSH2;ENSG00000113318|ENST00000265081|MSH3;MSH2|p.M813Nfs*11|1|0.17|ENSG00000095002|chr2:47478497-47478498|-/A|frameshift_variant;MSH2|p.T806Kfs*4|1|0.2|ENSG00000095002|chr2:47478472-47478478|CACTCAC/-|frameshift_variant;MSH3|p.N1020Ifs*40|1|0.46|ENSG00000113318|chr5:80864865-80864865|A/-|frameshift_variant;MSH3|p.N1020Kfs*17|1|0.43|ENSG00000113318|chr5:80864864-80864865|-/A|frameshift_variant;nc|ENSG00000095002|P43246-2|MSH2	39.252832667884924	0.4290233611298554	6				NaN	NaN	0	NaN	4357	2829	7185
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7189	21.872	NaN	8834.1	30	0	1046.6	0.106			+	32450	QVKEILTR	8	78	493.8035376586792	985.5925223841584	2	493.8028564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QVKEILTR_	REV__ENSG00000272333|ENST00000420124|KMT2B;REV__KMT2B|p.A2538Pfs*76|1|0.42|ENSG00000272333|chr19:35737693-35737693|G/-|frameshift_variant	127.46168284122857	0.2238874366747666	6				NaN	NaN	0	NaN	4358	2829	7185
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7190	21.874	NaN	4402.8	30	0	889.92	0.106	+			50721	YEGTGRSL	8	61	441.7197321188876	881.4249113045752	2	441.7194519042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YEGTGRSL_	ENSG00000135372|ENST00000257829|NAT10;nc|ENSG00000135372|Q9H0A0-2|NAT10	52.936696900407355	0.5717071646657654	6				NaN	NaN	0	NaN	4359	2829	7185
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7191	21.876	NaN	1819.3	30	0	469.38	0.106			+	-1	GLMFVMSRL	9	43	357.1889805564824	1068.5451122696472	3	357.1888732910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_GLMFVM(Oxidation (M))SRL_	REV__ENSG00000114127|ENST00000392981|XRN1;REV__ENST00000472697.5_1_3:142095319-142144369:-|nuORF;REV__nc|ENSG00000114127|Q8IZH2|XRN1;REV__XRN1|p.M1309Cfs*14|1|0.4|ENSG00000114127|chr3:142335462-142335462|T/-|frameshift_variant;REV__XRN1|p.R1611Gfs*34|5|0.22|ENSG00000114127|chr3:142311801-142311801|T/-|frameshift_variant	29.14955571784316	0.5308295550522326	6				NaN	NaN	0	NaN	4360	2829	7185
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7192	21.878	NaN	8303.4	30	0	864.31	0.038	+			23673	LASKYPDFKQ	10	73	399.5490380977632	1195.6252848934896	3	399.88311767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LASKYPDFKQ_	ENSG00000127804|ENST00000263092|METTL16;ENST00000577148.1_1_17:2380968-2405559:-|nuORF;METTL16|p.I349Ffs*5|1|0.13|ENSG00000127804|chr17:2420748-2420748|T/-|frameshift_variant;METTL16|p.R241Kfs*6|1|0.45|ENSG00000127804|chr17:2464214-2464215|-/T|frameshift_variant;nc|ENSG00000127804|Q86W50-2|METTL16	32.75053402867276	0.6123771875927935	6				NaN	NaN	0	NaN	4361	2829	7185
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7210	21.913	NaN	27925	30	0	6186.9	0.214	+			866	AEHDAVRNAL	10	73	548.2808336144986	1094.5471142957972	2	548.2810668945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEHDAVRNAL_	ENSG00000183734|ENST00000331289|ASCL2	74.1650062923329	0.2432923583094885	6				NaN	NaN	0	NaN	4376	2832	7209
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7211	21.916	NaN	10803	30	0	1849.7	0.106	+			16430	HESDVKIVA	9	79	499.2694358703967	996.5243188075934	2	499.2691955566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HESDVKIVA_	ENSG00000165238|ENST00000427277|WNK2;nc|ENSG00000165238|Q9Y3S1-2|WNK2;nc|ENSG00000165238|Q9Y3S1-3|WNK2;nc|ENSG00000165238|Q9Y3S1-4|WNK2;nc|ENSG00000165238|Q9Y3S1|WNK2;WNK2|p.S1424Pfs*5|1|0.34|ENSG00000165238|chr9:93288908-93288908|C/-|frameshift_variant;WNK2|p.T1980Lfs*12|2|0.16|ENSG00000165238|chr9:93297965-93297965|C/-|frameshift_variant	93.5975768576971	0.05472259948179787	6				NaN	NaN	0	NaN	4377	2832	7209
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7212	21.918	NaN	84576	30	0	10315	0.106			+	-1	SLVRCIAK	8	107	473.77837490742684	945.5421968816537	2	473.7781982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SLVRC(Carbamidomethyl (C))IAK_	REV__ENSG00000149218|ENST00000278505|ENDOD1	54.776311868738084	0.5534952410049249	6				NaN	NaN	0	NaN	4378	2832	7209
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7213	21.92	NaN	173520	30	0	69425	0.106	+			14597	GTGALKTDFTR	11	89	389.5437463594118	1165.6094096784354	3	389.54345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTGALKTDFTR_	ENSG00000211456|ENST00000389061|SACM1L;ENST00000464102.5_1_3:45776682-45785158:+|nuORF;nc|ENSG00000211456|Q9NTJ5-2|SACM1L	58.2462437865262	0.33910980880557884	6				NaN	NaN	0	NaN	4379	2832	7209
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7214	21.922	NaN	8042.6	30	0	1922.7	0.106			+	-1	ALYVCFGPAI	10	44	365.8562382575208	1094.5468853727623	3	365.8561706542969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))ALYVCFGPAI_	REV__ENST00000358220.5_1_10:1175674-1175758:+|nuORF	35.200714571348534	0.5923680232273616	6				NaN	NaN	0	NaN	4380	2832	7209
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7215	21.924	NaN	3684.6	30	0	379.08	0.035				-1	 	0	66	516.3140016434369	1030.6134503536737	2	516.3141479492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4381	2832	7209
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7216	21.924	NaN	8863.6	30	0	1396.3	0.139			+	44055	TPRIGSIGL	9	72	457.2767966502223	912.5390403672446	2	457.2766418457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TPRIGSIGL_	REV__ENSG00000001497|ENST00000374811|LAS1L;REV__ENST00000484069.1_1_X:64743438-64749476:-|nuORF;REV__nc|ENSG00000001497|Q9Y4W2-2|LAS1L;REV__nc|ENSG00000001497|Q9Y4W2-3|LAS1L	33.51558372728122	0.4900267029546261	6				NaN	NaN	0	NaN	4382	2832	7209
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7234	21.964	NaN	51190	30	0	6637.1	0.214	+			47767	VSGSLQGGLL	10	95	465.76634078257007	929.5181286319402	2	465.7662658691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSGSLQGGLL_	ENST00000473501.1_1_3:196755203-196755518:-|nuORF	85.16082228582465	0.15877915086237185	6				NaN	NaN	0	NaN	4397	2835	7233
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7235	21.967	NaN	10371	30	0	1123.4	0.106			+	44252	TSADRLMLNK	10	79	383.5402568887546	1147.5989412664637	3	383.5401611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TSADRLMLNK_	REV__ENSG00000135424|ENST00000257879|ITGA7;REV__ENST00000557555.1_3_12:56079014-56082669:-|nuORF;REV__nc|ENSG00000135424|Q13683-10|ITGA7;REV__nc|ENSG00000135424|Q13683-13|ITGA7;REV__nc|ENSG00000135424|Q13683-3|ITGA7;REV__nc|ENSG00000135424|Q13683-9|ITGA7;REV__nc|ENSG00000135424|Q13683|ITGA7	37.50817390946774	0.5721060100277453	6				NaN	NaN	0	NaN	4398	2835	7233
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7236	21.969	NaN	17630	30	0	1447.8	0.106			+	16176	HEAKKVEQE	9	85	549.2833920961388	1096.5522312590774	2	549.2833251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HEAKKVEQE_	REV__ENSG00000133422|ENST00000397641|MORC2;REV__ENST00000469915.1_1_22:31332963-31338135:-|nuORF;REV__nc|ENSG00000133422|Q9Y6X9-2|MORC2	122.1759843771914	0.019882474861609503	6				NaN	NaN	0	NaN	4399	2835	7233
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7237	21.971	NaN	12392	30	0	2252.6	0.106	+			12236	GASGSFKLNK	10	78	504.7776314720429	1007.5407100108858	2	504.7771911621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GASGSFKLNK_	ENSG00000124575|ENST00000244534|H1-3;ENSG00000124610|ENST00000244573|H1-1;ENSG00000168298|ENST00000304218|H1-4;ENSG00000184357|ENST00000331442|H1-5;ENSG00000187837|ENST00000343677|H1-2	138.06239232086	0.011270695112186733	6				NaN	NaN	0	NaN	4400	2835	7233
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7238	21.973	NaN	28727	30	0	5519.9	0.106	+			19926	KEFEGKTL	8	81	476.26114647469626	950.5077400161925	2	476.260986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEFEGKTL_	ENSG00000080824|ENST00000216281|HSP90AA1;ENST00000378770.1_1_4:190394307-190396341:+|nuORF;ENST00000530115.1_1_11:27910903-27911533:-|nuORF;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000205100|Q58FG1|HSP90AA4P	124.08010499294276	0.22872207833199332	6				NaN	NaN	0	NaN	4401	2835	7233
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7239	21.975	NaN	49337	30	0	9772.2	0.039	+			20868	KIMKDILEKK	10	113	415.9244786966672	1244.7516066902017	3	415.92425537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KIMKDILEKK_	ENSG00000080824|ENST00000216281|HSP90AA1;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1	60.69067153575145	0.3595586438680871	6				NaN	NaN	0	NaN	4402	2835	7233
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7240	21.976	NaN	8527	30	0	1043	0.142	+			34287	RTLDSVLKK	9	77	353.88880973143233	1058.644599794497	3	353.8887023925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RTLDSVLKK_	ENSG00000174197|ENST00000703841|MGA;MGA|p.D2578Rfs*45|1|0.32|ENSG00000174197|chr15:41762342-41762343|-/A|frameshift_variant;MGA|p.E1249Rfs*25|2|0.28|ENSG00000174197|chr15:41729243-41729244|-/A|frameshift_variant;MGA|p.E1249Rfs*42|1|0.17|ENSG00000174197|chr15:41729244-41729244|A/-|frameshift_variant;MGA|p.L1297Wfs*39|1|0.3|ENSG00000174197|chr15:41734566-41734566|C/-|frameshift_variant;MGA|p.S2228Kfs*5|1|0.33|ENSG00000174197|chr15:41750284-41750285|-/A|frameshift_variant;MGA|p.T1916Qfs*7|1|0.4|ENSG00000174197|chr15:41749350-41749350|A/-|frameshift_variant;nc|ENSG00000174197|Q8IWI9-3|MGA;nc|ENSG00000174197|Q8IWI9|MGA	77.28774426308219	0.10927638851652666	6				NaN	NaN	0	NaN	4403	2835	7233
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7258	22.014	NaN	12001	30	0	1729.2	0.214	+			16210	HECASINRI	9	74	550.2692332774303	1098.5239136216605	2	550.26953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_HEC(Carbamidomethyl (C))ASINRI_	ENSG00000172531|ENST00000376745|PPP1CA;ENSG00000186298|ENST00000335007|PPP1CC;ENSG00000213639|ENST00000395366|PPP1CB;ENST00000526510.5_1_11:67166008-67168740:-|nuORF;ENST00000532446.5_1_11:67166008-67168991:-|nuORF;nc|ENSG00000172531|P62136-2|PPP1CA;nc|ENSG00000172531|P62136-3|PPP1CA;nc|ENSG00000186298|P36873-2|PPP1CC;PPP1CB|p.E217Rfs*3|1|0.29|ENSG00000213639|chr2:28788708-28788709|-/G|frameshift_variant	148.98678547993487	0.0071052929883181565	6				NaN	NaN	0	NaN	4418	2838	7257
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7259	22.017	NaN	31023	30	0	5908	0.106	+			137	AAGPSCALK	9	78	409.2155102429895	816.4164675527791	2	409.2153625488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAGPSCALK_	ENSG00000125968|ENST00000376112|ID1;ID1|p.G120Afs*20|1|0.38|ENSG00000125968|chr20:31605737-31605737|C/-|frameshift_variant;nc|ENSG00000125968|P41134-2|ID1	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	4419	2838	7257
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7260	22.019	NaN	10501	30	0	3466.7	0.106	+			18871	IVGPNGVGK	9	57	420.7505163225185	839.486479711837	2	420.75030517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IVGPNGVGK_	ABCF1|p.S665R|1|0.46|ENSG00000204574|chr6:30586675-30586675|T/A|missense_variant;ENSG00000204574|ENST00000326195|ABCF1;nc|ENSG00000204574|Q8NE71-2|ABCF1	63.30626980617807	0.18605348971131092	6				NaN	NaN	0	NaN	4420	2838	7257
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7261	22.021	NaN	4490.7	30	0	1559	0.106	+			24068	LEKAFSGNK	9	63	497.2719882510821	992.5294235689643	2	497.2716064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LEKAFSGNK_	ENST00000522362.6_1_8:26363853-26363976:-|nuORF	54.776311868738084	0.25715957988447635	6				NaN	NaN	0	NaN	4421	2838	7257
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7262	22.023	NaN	41239	30	0	14660	0.106	+			4682	ATLSEARLK	9	56	330.19769824266297	987.5712653281889	3	330.19769287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATLSEARLK_	ENSG00000153815|ENST00000537098|CMIP;nc|ENSG00000153815|Q8IY22-2|CMIP;nc|ENSG00000153815|Q8IY22-3|CMIP	41.42661286455405	0.403525789677298	6				NaN	NaN	0	NaN	4422	2838	7257
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7263	22.025	NaN	7272.6	30	0	2839.8	0.033	+			37861	SNPGGRPAL	9	60	434.7354535956812	867.4563542581624	2	434.735107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SNPGGRPAL_	ENSG00000114554|ENST00000393409|PLXNA1;PLXNA1|p.Q1019Rfs*22|3|0.36|ENSG00000114554|chr3:127016548-127016548|C/-|frameshift_variant	69.6276240434122	0.14239879520340665	6				NaN	NaN	0	NaN	4423	2838	7257
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7264	22.025	NaN	20407	30	0	9992.2	0.142			+	5486	AVAAVAEYSR	10	46	346.18562661695756	1035.5350504510727	3	346.185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AVAAVAEYSR_	REV__RBM4B|p.A235V|1|0.37|ENSG00000173914|chr11:66669000-66669000|G/A|missense_variant	19.996771675451527	0.7148376616046445	6				NaN	NaN	0	NaN	4424	2838	7257
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7282	22.065	NaN	11308	30	0	2443	0.214	+			44672	TTGQVVAMK	9	69	467.75456980223873	933.4945866712775	2	467.7549133300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTGQVVAMK_	ENSG00000170312|ENST00000395284|CDK1;ENST00000475504.6_1_10:62539923-62545554:+|nuORF;nc|ENSG00000170312|P06493-2|CDK1	123.20810148215591	0.019257656778428764	6				NaN	NaN	0	NaN	4439	2841	7281
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7283	22.068	NaN	6203.1	30	0	2749.9	0.106			+	-1	CQAQLGLVQ	9	67	508.7620591124819	1015.5095652917638	2	508.2624206542969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_C(Carbamidomethyl (C))QAQLGLVQ_	REV__nc|ENSG00000196642|Q3YEC7-3|RABL6	38.80614096846853	0.43426287593479557	6				NaN	NaN	0	NaN	4440	2841	7281
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7284	22.07	NaN	24550	30	0	3477.4	0.106				-1	 	0	80	571.9191420688903	1712.735596806871	3	571.919189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4441	2841	7281
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7285	22.072	NaN	9649.5	30	0	1775.9	0.106			+	-1	YPRLALPSPM	10	51	387.54385376592717	NaN	0	387.5438537597656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_YPRLALPSPM(Oxidation (M))_	REV__ENSG00000172680|ENST00000311923|MOS	35.15202426646627	0.38475398474706135	6				NaN	NaN	0	NaN	4442	2841	7281
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7286	22.074	NaN	6615.2	30	0	1013.2	0.106	+			19006	IVVNKQGQ	8	74	443.2613170357593	884.5080811383186	2	444.76129150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IVVNKQGQ_	ENST00000397467.2_1_3:1947466-1947595:+|nuORF;ENST00000493466.1_1_4:37823021-37823243:+|nuORF	40.5726180659479	0.6527593143185008	6				NaN	NaN	0	NaN	4443	2841	7281
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7287	22.076	NaN	1511.3	30	0	158.23	0.046				-1	 	0	50	589.5945516505644	1765.7618255518933	3	589.59521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4444	2841	7281
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7288	22.076	NaN	61024	30	0	37917	0.147				-1	AICQWERNK	9	81	402.2011101695823	1203.581501108947	3	402.2013244628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_AIC(Carbamidomethyl (C))QWERNK_	ENSG00000140526|ENST00000352732|ABHD2	36.446750945000026	0.4619375763483977	6				NaN	NaN	0	NaN	4445	2841	7281
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7306	22.115	NaN	20131	30	0	10374	0.214	+			16853	HPESERISM	9	65	543.2559788774615	1084.497404821723	2	543.2562866210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HPESERISM_	ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1	58.78195531508484	0.22376836668196862	6				NaN	NaN	0	NaN	4460	2844	7305
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7307	22.118	NaN	35654	30	0	7198.8	0.106	+			7208	DAIRNLHHY	9	99	380.1970307043895	1137.5692627133685	3	380.1965637207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DAIRNLHHY_	ENSG00000173914|ENST00000310046|RBM4B;ENSG00000173933|ENST00000310092|RBM4;nc|ENSG00000173933|Q9BWF3-2|RBM4;nc|ENSG00000173933|Q9BWF3-3|RBM4;nc|ENSG00000173933|Q9BWF3-4|RBM4	54.776311868738084	0.25715957988447635	6				NaN	NaN	0	NaN	4461	2844	7305
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7308	22.12	NaN	41513	30	0	12162	0.106	+			3929	ATASPIVAR	9	84	443.2613170357593	884.5080811383186	2	443.2610168457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATASPIVAR_	ENSG00000131725|ENST00000254029|WDR44;nc|ENSG00000131725|Q5JSH3-2|WDR44;nc|ENSG00000131725|Q5JSH3-4|WDR44;WDR44|p.N542Mfs*11|2|0.39|ENSG00000131725|chrX:118409575-118409575|A/-|frameshift_variant	107.00750918261382	0.032051501805654005	6				NaN	NaN	0	NaN	4462	2844	7305
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7309	22.122	NaN	8640.1	30	0	1773	0.106	+			49333	VVSETLAQK	9	72	487.77951340864945	973.5444738840989	2	487.7792053222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVSETLAQK_	ENSG00000198842|ENST00000361200|STYXL2	79.71258880314673	0.09879134589249085	6				NaN	NaN	0	NaN	4463	2844	7305
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7310	22.124	NaN	7641.1	30	0	3996.8	0.106			+	1875	AILMIFGVAGL	11	46	368.888891341698	1103.6448446252941	3	368.888916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AILMIFGVAGL_	REV__tr|U7SNH4|U7SNH4_FUSNUCitrate-sodiumsymporterOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01991PE=4SV=1	27.047317107675042	0.7060868989289394	6				NaN	NaN	0	NaN	4464	2844	7305
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7311	22.126	NaN	5498.7	30	0	3002.8	0.036	+			260	AAMLMPHQK	9	42	342.8455908713248	1025.5149432141745	3	342.8455810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AAMLMPHQK_	ENSG00000138663|ENST00000264389|COPS4;nc|ENSG00000138663|Q9BT78-2|COPS4	33.51558372728122	0.4900267029546261	6				NaN	NaN	0	NaN	4465	2844	7305
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7312	22.126	NaN	5082.8	30	0	2752.6	0.14	+			46877	VILVSHTPQ	9	45	331.86235501148576	992.5652356346573	3	331.8623352050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VILVSHTPQ_	ENSG00000130856|ENST00000320610|ZNF236;ENST00000543926.6_1_18:74647944-74680292:+|nuORF;nc|ENSG00000130856|Q9UL36|ZNF236;ZNF236|p.E1775Sfs*19|1|0.31|ENSG00000130856|chr18:76960761-76960761|G/-|frameshift_variant	20.481830146152948	0.6112419832031293	6				NaN	NaN	0	NaN	4466	2844	7305
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7330	22.166	NaN	19492	30	0	8412	0.214			+	45972	VATAWTRGRLD	11	83	415.89450718723947	1244.6616921619184	3	415.8943176269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VATAWTRGRLD_	REV__ENSG00000145198|ENST00000691901|VWA5B2;REV__ENST00000461141.5_1_3:183952309-183959823:+|nuORF	41.080066990542036	0.5431644350485484	6				NaN	NaN	0	NaN	4481	2847	7329
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7331	22.17	NaN	20562	30	0	6958	0.106	+			11411	FLQLHHQQQ	9	69	393.5405489782902	1177.5998175350705	3	393.5403137207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FLQLHHQQQ_	ENSG00000233436|ENST00000422652|BTBD18	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	4482	2847	7329
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7332	22.172	NaN	7409.6	30	0	2212.9	0.106	+			2718	AQSYVLVKK	9	58	345.8780809454854	1034.6124134366562	3	345.8780212402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AQSYVLVKK_	ENSG00000167881|ENST00000307877|SRP68;ENST00000586859.1_1_17:74039843-74041464:-|nuORF;nc|ENSG00000167881|Q9UHB9-2|SRP68;nc|ENSG00000167881|Q9UHB9-3|SRP68;nc|ENSG00000167881|Q9UHB9-4|SRP68	52.936696900407355	0.27249468807391813	6				NaN	NaN	0	NaN	4483	2847	7329
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7333	22.174	NaN	14508	30	0	2441.9	0.106	+			2614	AQHSIFADK	9	80	508.7620591124819	1015.5095652917638	2	508.76165771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AQHSIFADK_	ENST00000468531.1_1_1:32385166-32408168:-|nuORF;ENST00000526960.1_1_1:32385166-32410235:-|nuORF;ENST00000529477.5_1_1:32385166-32403656:-|nuORF	102.0615471778698	0.03709830720253279	6				NaN	NaN	0	NaN	4484	2847	7329
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7334	22.175	NaN	6336.6	30	0	1706.1	0.106			+	10645	EYPTETLT	8	69	477.2274618718241	952.4403708104483	2	477.2273254394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EYPTETLT_	REV__ENSG00000181143|ENST00000397910|MUC16	33.51558372728122	0.7005509609380386	6				NaN	NaN	0	NaN	4485	2847	7329
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7335	22.177	NaN	2443.6	30	0	368.82	0.036	+			5849	AVINEDPNAK	10	58	535.777347605647	1069.540142278094	2	535.7774658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AVINEDPNAK_	ENSG00000054523|ENST00000676179|KIF1B;nc|ENSG00000054523|O60333-2|KIF1B;nc|ENSG00000054523|O60333-3|KIF1B;nc|ENSG00000054523|O60333-4|KIF1B	59.93077597824379	0.36646980200755325	6				NaN	NaN	0	NaN	4486	2847	7329
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7336	22.178	NaN	7475.2	30	0	3165.5	0.145				-1	FKPCIIIKM	9	56	389.2211816577615	1164.6417155734846	3	389.2206726074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C),Oxidation (M)	_FKPC(Carbamidomethyl (C))IIIKM(Oxidation (M))_	ENST00000330374.6_1_X:150577636-150577702:+|nuORF	19.1035232394073	0.6112419832031293	6				NaN	NaN	0	NaN	4487	2847	7329
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7354	22.217	NaN	29554	30	0	6469.4	0.214	+			36594	SGAQPILSK	9	79	450.7611404184868	899.5077279037736	2	450.76104736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SGAQPILSK_	ENSG00000105355|ENST00000221957|PLIN3;nc|ENSG00000105355|O60664-3|PLIN3;nc|ENSG00000105355|O60664-4|PLIN3	139.38205640894643	0.01076996779551382	6				NaN	NaN	0	NaN	4502	2850	7353
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7355	22.22	NaN	63953	30	0	28078	0.106	+			19278	KAFNQGKIFK	10	98	394.23321962957687	1179.6778294889307	3	394.2328186035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KAFNQGKIFK_	ENSG00000254772|ENST00000329251|EEF1G;ENST00000526409.5_1_11:62327153-62342310:-|nuORF;nc|ENSG00000254772|P26641-2|EEF1G;NCEH1-EEF1G|1|fusion	62.107414245175825	0.3466735403679669	6				NaN	NaN	0	NaN	4503	2850	7353
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7356	22.222	NaN	13009	30	0	4578.7	0.106	+			70	AAATATVLK	9	67	423.2583160726302	844.5020792120604	2	423.2581481933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AAATATVLK_	ENSG00000174307|ENST00000367311|PHLDA3	136.26810882979174	0.012230845423532208	6				NaN	NaN	0	NaN	4504	2850	7353
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7357	22.224	NaN	93884	30	0	12124	0.106				-1	 	0	110	560.802645741351	1119.5907385495018	2	560.8043212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4505	2850	7353
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7358	22.226	NaN	8162.2	30	0	1852.7	0.106	+			17044	HPYQPDPKM	9	59	556.7628751215065	1111.5111973098128	2	556.7638549804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HPYQPDPKM_	CBX4|p.E288Rfs*117|1|0.35|ENSG00000141582|chr17:79834780-79834780|C/-|frameshift_variant;CBX4|p.N231Tfs*3|2|0.38|ENSG00000141582|chr17:79834952-79834952|G/-|frameshift_variant;ENSG00000141582|ENST00000269397|CBX4	65.46538089061403	0.16805504838372562	6				NaN	NaN	0	NaN	4506	2850	7353
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7359	22.228	NaN	4653.6	30	0	1442.8	0.106			+	16905	HPKNEETIY	9	62	565.7776285718327	1129.5407042104653	2	565.7783813476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HPKNEETIY_	REV__ENSG00000157423|ENST00000393567|HYDIN;REV__HYDIN|p.F4256Vfs*111|1|0.27|ENSG00000157423|chr16:70849833-70849834|-/C|frameshift_variant	44.116797842482775	0.37197099687881774	6				NaN	NaN	0	NaN	4507	2850	7353
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7360	22.229	NaN	3675.4	30	0	681.19	0.035	+			16307	HEIAHNAAF	9	66	505.2459307292561	1008.4773085253122	2	505.24603271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HEIAHNAAF_	ENSG00000143753|ENST00000323699|DEGS1	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	4508	2850	7353
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7379	22.263	NaN	115790	30	0	42464	0.214	+			39910	STLVHPELQP	10	93	374.2047695248251	1119.5924791746754	3	374.20465087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STLVHPELQP_	ENSG00000090565|ENST00000262305|RAB11FIP3;ENST00000483002.1_1_16:524982-539001:+|nuORF;nc|ENSG00000090565|O75154-2|RAB11FIP3;nc|ENSG00000090565|O75154-3|RAB11FIP3	24.20275056022122	0.6821818413321409	6				NaN	NaN	0	NaN	4524	2853	7378
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7380	22.267	NaN	26162	30	0	8966.2	0.106	+			39580	STGNMVISK	9	75	468.74430463136	NaN	0	468.744384765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STGNMVISK_	ENSG00000102837|ENST00000219022|OLFM4	174.8648734531126	0.007146565786413454	6				NaN	NaN	0	NaN	4525	2853	7378
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7381	22.269	NaN	34479	30	0	24233	0.106			+	8229	EAERSKRLL	9	69	367.8840227929398	1100.6302389790194	3	367.8839416503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EAERSKRLL_	REV__ENSG00000151332|ENST00000416007|MBIP;REV__nc|ENSG00000151332|Q9NS73-5|MBIP	30.503639358989545	0.5181749237905803	6				NaN	NaN	0	NaN	4526	2853	7378
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7382	22.271	NaN	4732.7	30	0	845.57	0.106	+			30578	QANVNNTNY	9	59	519.2359961812797	1036.4574394293593	2	519.2360229492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QANVNNTNY_	sp|F5HHH2|UL142_HCMVMMembraneglycoproteinUL142OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL142PE=1SV=1	74.25504064058377	0.12238981753128622	6				NaN	NaN	0	NaN	4527	2853	7378
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7383	22.273	NaN	4605.3	30	0	388.07	0.106			+	17474	ICQKRVVT	8	68	473.77837490742684	945.5421968816537	2	473.7809753417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ICQKRVVT_	REV__HERV1_I-int_dup2|chr3:34679996-34686397:+|1.0948245018220069|0.0565463038051543|4.28|448.0|12|1|sense	40.5726180659479	0.6527593143185008	6				NaN	NaN	0	NaN	4528	2853	7378
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7384	22.275	NaN	2629.1	30	0	561.43	0.106	+			33191	REVVAGSHEL	10	57	548.7908076315963	NaN	0	548.791259765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_REVVAGSHEL_	ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1	36.446750945000026	0.3805027428805705	6				NaN	NaN	0	NaN	4529	2853	7378
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7385	22.276	NaN	12229	30	0	1712.8	0.034	+			46203	VEAEKQAAL	9	68	479.7638841540624	957.5132153749248	2	479.76348876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VEAEKQAAL_	ENSG00000143850|ENST00000272203|PLEKHA6;PLEKHA6|p.D852Tfs*20|1|0.44|ENSG00000143850|chr1:204230443-204230443|G/-|frameshift_variant	98.58198989935565	0.04066992115528678	6				NaN	NaN	0	NaN	4530	2853	7378
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7403	22.314	NaN	27292	30	0	9137	0.214	+			14210	GSSEPITVK	9	70	459.25017600333615	NaN	0	459.25018310546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSSEPITVK_	ENSG00000066044|ENST00000407627|ELAVL1;nc|ENSG00000066044|Q15717-2|ELAVL1	93.1432384553994	0.0352600271724948	6				NaN	NaN	0	NaN	4545	2856	7402
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7404	22.318	NaN	8695.6	30	0	676.84	0.106	+			20672	KGLYEKGR	8	73	475.77448429177804	949.5344156503561	2	475.7742004394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KGLYEKGR_	ENSG00000135473|ENST00000440411|PAN2;ENST00000547226.5_1_12:56711395-56716647:-|nuORF;ENST00000551359.5_1_12:56711395-56713019:-|nuORF;ENST00000553230.1_1_12:56711395-56712273:-|nuORF;nc|ENSG00000135473|Q504Q3-3|PAN2;nc|ENSG00000135473|Q504Q3|PAN2	58.78195531508484	0.5138399468736706	6				NaN	NaN	0	NaN	4546	2856	7402
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7405	22.32	NaN	10229	30	0	3183.8	0.106	+			12389	GDYKTIAK	8	64	448.24766209008146	NaN	0	448.24749755859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GDYKTIAK_	ENSG00000097033|ENST00000370558|SH3GLB1;nc|ENSG00000097033|Q9Y371-2|SH3GLB1;nc|ENSG00000097033|Q9Y371-3|SH3GLB1	58.22992032128504	1.7418937515398478	6				NaN	NaN	0	NaN	4547	2856	7402
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7406	22.321	NaN	4909.7	30	0	2715.5	0.106	+			45155	TVLSKRKLT	9	37	349.22962344093577	1044.6670409230073	3	349.22906494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TVLSKRKLT_	ENSG00000136628|ENST00000366923|EPRS1	30.317721548370564	0.5199124245378496	6				NaN	NaN	0	NaN	4548	2856	7402
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7407	22.323	NaN	6807.1	30	0	1382.2	0.106	+			6403	AVVGPVGAGK	10	60	427.7582122039948	853.5018714747896	2	427.7581481933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVVGPVGAGK_	ABCC4|p.L883Wfs*7|2|0.22|ENSG00000125257|chr13:95083178-95083178|A/-|frameshift_variant;ABCC4|p.T775Rfs*21|1|0.09|ENSG00000125257|chr13:95161322-95161323|-/AGTATGTCTT|frameshift_variant;ABCC6|p.L780Wfs*31|1|0.44|ENSG00000091262|chr16:16178875-16178875|G/-|frameshift_variant;ENSG00000091262|ENST00000205557|ABCC6;ENSG00000125257|ENST00000645237|ABCC4;nc|ENSG00000091262|O95255-3|ABCC6;nc|ENSG00000125257|O15439-2|ABCC4;nc|ENSG00000125257|O15439-3|ABCC4;nc|ENSG00000125257|O15439-4|ABCC4	60.97194046774394	0.3570005369683776	6				NaN	NaN	0	NaN	4549	2856	7402
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7408	22.325	NaN	6470	30	0	968.74	0.033	+			16444	HESPAVKL	8	67	440.74760123645257	NaN	0	440.7476501464844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HESPAVKL_	ENSG00000097046|ENST00000234626|CDC7	74.25504064058377	1.7418937515398478	6				NaN	NaN	0	NaN	4550	2856	7402
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7409	22.326	NaN	12092	30	0	4785.8	0.143			+	-1	GTIGCSNIVDQ	11	51	388.51624783805016	1162.5269141143506	3	388.5160217285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_GTIGC(Carbamidomethyl (C))SNIVDQ_	REV__ENSG00000055609|ENST00000262189|KMT2C;REV__KMT2C|p.F4496Lfs*21|3|0.28|ENSG00000055609|chr7:152148439-152148439|A/-|frameshift_variant;REV__KMT2C|p.I4868Lfs*37|1|0.28|ENSG00000055609|chr7:152138837-152138837|T/-|frameshift_variant;REV__KMT2C|p.T3715Qfs*4|1|0.34|ENSG00000055609|chr7:152162434-152162434|T/-|frameshift_variant;REV__nc|ENSG00000055609|Q8NEZ4-2|KMT2C;REV__nc|ENSG00000055609|Q8NEZ4-3|KMT2C	27.64392233501311	0.6998289966465058	6				NaN	NaN	0	NaN	4551	2856	7402
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7428	22.363	NaN	10323	30	0	1182.2	0.214	+			26377	LTDLGKSLK	9	74	487.79732307781893	NaN	0	487.7973327636719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LTDLGKSLK_	tr|U7STM8|U7STM8_FUSNUHTHmarR-typedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01402PE=4SV=1	45.97224482568171	0.23445038899310136	6				NaN	NaN	0	NaN	4567	2859	7427
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7429	22.367	NaN	23135	30	0	4305.6	0.106	+			5007	ATSAPLVSR	9	73	451.25678786986896	900.4990228065379	2	451.2569580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATSAPLVSR_	CELSR1|p.G1602Vfs*104|1|0.17|ENSG00000075275|chr22:46410526-46410526|C/-|frameshift_variant;CELSR1|p.I2650Sfs*5|1|0.42|ENSG00000075275|chr22:46369187-46369187|T/-|frameshift_variant;CELSR1|p.R2275Qfs*18|1|0.18|ENSG00000075275|chr22:46384603-46384604|-/G|frameshift_variant;CELSR1|p.T1849Rfs*8|2|0.25|ENSG00000075275|chr22:46397831-46397831|C/-|frameshift_variant;CELSR2-KIAA1324|1|fusion;CELSR2|p.G1044Vfs*17|1|0.42|ENSG00000143126|chr1:109253206-109253206|G/-|frameshift_variant;CELSR2|p.P2879Lfs*14|1|0.28|ENSG00000143126|chr1:109273557-109273557|C/-|frameshift_variant;CELSR2|p.V2215Wfs*26|2|0.42|ENSG00000143126|chr1:109269115-109269115|C/-|frameshift_variant;CELSR3|p.A2340Pfs*45|1|0.25|ENSG00000008300|chr3:48647952-48647952|C/-|frameshift_variant;CELSR3|p.R2529Pfs*2|1|0.34|ENSG00000008300|chr3:48645746-48645747|-/G|frameshift_variant;CELSR3|p.S1935Afs*4|1|0.38|ENSG00000008300|chr3:48651998-48651998|G/-|frameshift_variant;ENSG00000008300|ENST00000164024|CELSR3;ENSG00000075275|ENST00000674500|CELSR1;ENSG00000143126|ENST00000271332|CELSR2;ENST00000497509.1_1_22:46926386-46930076:-|nuORF;nc|ENSG00000008300|Q9NYQ7-2|CELSR3;nc|ENSG00000075275|Q9NYQ6-2|CELSR1;nc|ENSG00000075275|Q9NYQ6|CELSR1	58.22992032128504	0.22837015374068087	6				NaN	NaN	0	NaN	4568	2859	7427
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7430	22.369	NaN	24840	30	0	6416.1	0.106	+			4002	ATCDHPYIVK	10	76	401.8656652656894	NaN	0	401.86566162109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_ATC(Carbamidomethyl (C))DHPYIVK_	ENSG00000072786|ENST00000176763|STK10;ENST00000519710.1_1_5:171533786-171583726:-|nuORF;STK10|p.T526Pfs*15|3|0.11|ENSG00000072786|chr5:172090341-172090341|T/-|frameshift_variant	66.96192283764107	0.17742606645642828	6				NaN	NaN	0	NaN	4569	2859	7427
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7431	22.371	NaN	6698.3	30	0	802.31	0.106				-1	 	0	62	618.605180003827	NaN	0	618.60498046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4570	2859	7427
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7432	22.373	NaN	6261.4	30	0	1370.2	0.106	+			32938	REAPERPSL	9	76	527.7856826911064	1053.5568124490128	2	527.7859497070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_REAPERPSL_	ENSG00000107672|ENST00000369023|NSMCE4A;ENST00000489266.5_1_10:123734227-123734680:-|nuORF;nc|ENSG00000107672|Q9NXX6-2|NSMCE4A	104.01359247289065	0.03510646158778409	6				NaN	NaN	0	NaN	4571	2859	7427
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7433	22.374	NaN	3540.8	30	0	697.12	0.032			+	2634	AQILCAAQ	8	45	409.2155102429895	816.4164675527791	2	409.21533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AQILCAAQ_	REV__ENSG00000173226|ENST00000310864|IQCB1;REV__ENST00000401788.2_1_6:27978946-27979378:+|nuORF	31.954861631926434	0.7126016770032289	6				NaN	NaN	0	NaN	4572	2859	7427
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7434	22.375	NaN	3991.1	30	0	528.43	0.14	+			47712	VSFKDIGW	8	63	476.25182654660995	950.4891001600199	2	476.2510070800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VSFKDIGW_	ENSG00000122641|ENST00000242208|INHBA;ENST00000464515.1_1_7:41729250-41730808:-|nuORF	56.72105179125745	0.5342425954139568	6				NaN	NaN	0	NaN	4573	2859	7427
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7452	22.414	NaN	13116	30	0	1411.4	0.214	+			34169	RTATIMIQK	9	77	531.3104207556472	1060.6062885780943	2	531.3109741210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTATIMIQK_	ENSG00000167306|ENST00000285039|MYO5B	106.88024417677582	0.032181361622142884	6				NaN	NaN	0	NaN	4588	2862	7451
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7453	22.418	NaN	12010	30	0	5124.2	0.106	+			8715	EEEDPLDQL	9	67	363.1651018213882	1086.4734760643646	3	363.16534423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EEEDPLDQL_	ENSG00000181924|ENST00000355693|COA4;nc|ENSG00000181924|Q9NYJ1-2|COA4	79.71258880314673	0.09879134589249085	6				NaN	NaN	0	NaN	4589	2862	7451
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7454	22.42	NaN	11930	30	0	2876.3	0.106	+			38795	SSMSTALSK	9	64	456.22864303214135	910.4427331310827	2	456.2286071777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSMSTALSK_	nc|ENSG00000138119|Q9NZM1-3|MYOF	155.5846463517096	0.005567437401040498	6				NaN	NaN	0	NaN	4590	2862	7451
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7455	22.422	NaN	9954.6	30	0	3149.2	0.106	+			18559	ISNLPTVKK	9	45	333.87803591702766	998.6122783512831	3	333.8780517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ISNLPTVKK_	ENSG00000174156|ENST00000211122|GSTA3;ENSG00000182793|ENST00000370989|GSTA5;ENSG00000243955|ENST00000334575|GSTA1;ENSG00000244067|ENST00000493422|GSTA2;GSTA1|p.L198P|1|0.14|ENSG00000243955|chr6:52791934-52791934|A/G|missense_variant	65.46538089061403	0.16805504838372562	6				NaN	NaN	0	NaN	4591	2862	7451
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7456	22.424	NaN	11061	30	0	2454.9	0.106	+			32193	QSTSGLAII	9	69	445.2531289524983	888.4917049717966	2	445.2529602050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QSTSGLAII_	ENSG00000115970|ENST00000405975|THADA;nc|ENSG00000115970|Q6YHU6-3|THADA;nc|ENSG00000115970|Q6YHU6-5|THADA;nc|ENSG00000115970|Q6YHU6-6|THADA;THADA|p.A593Lfs*5|2|0.35|ENSG00000115970|chr2:43572945-43572945|C/-|frameshift_variant	45.9519527083369	0.35044536499095585	6				NaN	NaN	0	NaN	4592	2862	7451
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7457	22.425	NaN	34845	30	0	8121.9	0.039	+			33408	RIFAPNHVVAK	11	99	417.9155331092023	1250.7247699278068	3	417.9154052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RIFAPNHVVAK_	ENSG00000105640|ENST00000222247|RPL18A;ENST00000600238.1_1_19:17972170-17973061:+|nuORF;ENST00000602216.1_1_19:17970765-17972392:+|nuORF	99.78786539795823	0.061125669442822994	6				NaN	NaN	0	NaN	4593	2862	7451
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7458	22.426	NaN	4385.2	30	0	447.79	0.14	+			18755	ITLQEVVSH	9	64	513.2853379068544	1024.5561228805086	2	513.28515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ITLQEVVSH_	ENSG00000183856|ENST00000361170|IQGAP3;IQGAP3|p.Q1205Sfs*31|1|0.4|ENSG00000183856|chr1:156534628-156534628|G/-|frameshift_variant	55.50420428727701	0.2510918378945873	6				NaN	NaN	0	NaN	4594	2862	7451
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7476	22.465	NaN	60815	30	0	13427	0.214				-1	SQCGSLIGK	9	97	475.2420251346447	948.4694973360894	2	475.2419738769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SQC(Carbamidomethyl (C))GSLIGK_	ENSG00000090097|ENST00000461554|PCBP4;ENSG00000183570|ENST00000681687|PCBP3;ENSG00000197111|ENST00000546463|PCBP2;ENST00000468429.5_1_21:47321003-47359956:+|nuORF;ENST00000492809.5_1_3:51992079-51994784:-|nuORF;ENST00000497390.5_1_3:51992079-51994784:-|nuORF;ENST00000547717.1_1_12:53848575-53861193:+|nuORF;ENST00000548190.1_1_12:53849722-53854210:+|nuORF;nc|ENSG00000090097|P57723-2|PCBP4;nc|ENSG00000183570|P57721-2|PCBP3;nc|ENSG00000183570|P57721-3|PCBP3;nc|ENSG00000183570|P57721-4|PCBP3;nc|ENSG00000183570|P57721-5|PCBP3;nc|ENSG00000197111|Q15366-2|PCBP2;nc|ENSG00000197111|Q15366-4|PCBP2;nc|ENSG00000197111|Q15366-5|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;nc|ENSG00000197111|Q15366-7|PCBP2;nc|ENSG00000197111|Q15366-8|PCBP2;nc|ENSG00000197111|Q15366|PCBP2;PCBP2|p.T202Kfs*26|1|0.32|ENSG00000197111|chr12:53464773-53464773|C/-|frameshift_variant;PCBP4|p.G203Efs*11|1|0.1|ENSG00000090097|chr3:51959397-51959398|-/CTCT|frameshift_variant	99.01295224348159	0.040209060045561164	6				NaN	NaN	0	NaN	4609	2865	7475
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7477	22.469	NaN	19698	30	0	4455.2	0.106	+			3398	ASQEIAEKALK	11	66	396.5594637078287	1186.656561723686	3	396.55926513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASQEIAEKALK_	ENSG00000126945|ENST00000316594|HNRNPH2;ENSG00000169045|ENST00000393432|HNRNPH1;ENST00000522958.5_1_5:179046175-179048291:-|nuORF;HNRNPH2|p.L296Yfs*20|1|0.57|ENSG00000126945|chrX:101412869-101412869|G/-|frameshift_variant	67.21430809963624	0.25905749411346113	6				NaN	NaN	0	NaN	4610	2865	7475
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7478	22.471	NaN	9278.9	30	0	2596.8	0.106	+			45242	TVQEHLIEK	9	58	366.20484286045667	1095.59269918157	3	366.20477294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVQEHLIEK_	ENSG00000082898|ENST00000401558|XPO1;ENST00000428210.5_1_2:61705957-61719950:-|nuORF	54.776311868738084	0.25715957988447635	6				NaN	NaN	0	NaN	4611	2865	7475
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7479	22.473	NaN	11748	30	0	2579.4	0.106			+	40628	SVALSALPSS	10	67	466.2581916274442	930.5018303216884	2	466.258056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVALSALPSS_	REV__ENST00000457356.8_1_8:72756359-72756527:+|nuORF	76.7741389293348	0.22197596950688292	6				NaN	NaN	0	NaN	4612	2865	7475
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7480	22.475	NaN	6036.4	30	0	1257	0.106	+			42807	TEAPLNPKA	9	60	470.7586136394746	939.5026743457493	2	470.7583923339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TEAPLNPKA_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000446382.2_1_9:6834760-6835018:+|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000502306.1_1_5:15450853-15451165:+|nuORF;ENST00000567299.1_1_19:9629420-9629708:+|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;nc|ENSG00000204434|Q9BYX7|POTEKP	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	4613	2865	7475
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7481	22.476	NaN	2631.9	30	0	211.37	0.039	+			41152	SVKDCQTGKMH	11	48	411.8620914700719	1232.5644450104157	3	411.8619689941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVKDCQTGKMH_	ENSG00000040199|ENST00000568954|PHLPP2;ENST00000538126.5_1_16:71712656-71757677:-|nuORF;nc|ENSG00000040199|Q6ZVD8-2|PHLPP2;nc|ENSG00000040199|Q6ZVD8-3|PHLPP2;PHLPP2|p.Q739Lfs*7|1|0.05|ENSG00000040199|chr16:71658296-71658297|-/CCTTA|frameshift_variant	21.780426970141523	0.7613322811393133	6				NaN	NaN	0	NaN	4614	2865	7475
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7482	22.477	NaN	3553.7	30	0	477.89	0.143	+			33409	RIFAPNHVVAK	11	67	626.3697069610383	1250.7248609888766	2	626.36962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RIFAPNHVVAK_	ENSG00000105640|ENST00000222247|RPL18A;ENST00000600238.1_1_19:17972170-17973061:+|nuORF;ENST00000602216.1_1_19:17970765-17972392:+|nuORF	88.1336951990783	0.1064147647397003	6				NaN	NaN	0	NaN	4615	2865	7475
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7500	22.515	NaN	11846	30	0	1525.8	0.214	+			4474	ATIRNVLREK	10	66	400.57887212790894	1198.7147869839268	3	400.5787353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATIRNVLREK_	ENSG00000241973|ENST00000255882|PI4KA;ENST00000360806.9_2_22:21827645-21842641:-|nuORF;ENST00000450651.5_1_22:21841260-21846319:-|nuORF;ENST00000462560.6_1_22:21830876-21842641:-|nuORF;ENST00000467443.5_1_22:21831964-21846319:-|nuORF;nc|ENSG00000183506|A4QPH2-2|PI4KAP2;nc|ENSG00000183506|A4QPH2-4|PI4KAP2;nc|ENSG00000183506|A4QPH2|PI4KAP2;nc|ENSG00000241973|P42356-2|PI4KA;nc|ENSG00000290425|Q8N8J0|PI4KAP1	51.52775601994872	0.4429225830406686	6				NaN	NaN	0	NaN	4630	2868	7499
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7501	22.518	NaN	4404.8	30	0	1144.1	0.106			+	-1	QMFIEQVK	8	67	519.7696654837932	1037.5247780343864	2	519.7698364257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_QM(Oxidation (M))FIEQVK_	REV__ACTR3B-JMJD1C|1|fusion;REV__ENSG00000171988|ENST00000399262|JMJD1C;REV__JMJD1C|p.A1206Efs*30|1|0.07|ENSG00000171988|chr10:63208052-63208053|-/GTAAAGTT|frameshift_variant;REV__JMJD1C|p.A2114Cfs*5|1|0.04|ENSG00000171988|chr10:63189399-63189400|-/T|frameshift_variant;REV__JMJD1C|p.I2113Kfs*18|1|0.04|ENSG00000171988|chr10:63189400-63189401|-/TT|frameshift_variant;REV__JMJD1C|p.N429Ifs*32|1|0.1|ENSG00000171988|chr10:63214881-63214881|T/-|frameshift_variant	82.24051045832904	0.30490469762271794	6				NaN	NaN	0	NaN	4631	2868	7499
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7502	22.52	NaN	12357	30	0	6362.6	0.106			+	43539	TGYEQVGAEL	10	53	356.17208949358894	NaN	0	356.1720886230469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TGYEQVGAEL_	REV__ENSG00000197520|ENST00000445590|FAM177B	35.61828744233558	0.3832230071539346	6				NaN	NaN	0	NaN	4632	2868	7499
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7503	22.522	NaN	11773	30	0	2732.1	0.106			+	-1	RGGCTDRIR	9	60	364.1891069678651	1089.5454915037953	3	364.1889953613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_RGGC(Carbamidomethyl (C))TDRIR_	REV__nc|ENSG00000070495|Q6NYC1-2|JMJD6;REV__nc|ENSG00000070495|Q6NYC1-3|JMJD6	24.519189625965996	0.574102787014149	6				NaN	NaN	0	NaN	4633	2868	7499
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7504	22.524	NaN	7338.8	30	0	1125	0.106	+			49287	VVQEVVDGK	9	69	486.77201423150876	971.5294755298175	2	486.771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVQEVVDGK_	CON__P35900;ENSG00000171431|ENST00000167588|KRT20	125.71293069911285	0.017741295328254008	6				NaN	NaN	0	NaN	4634	2868	7499
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7505	22.526	NaN	2087.7	30	0	365.91	0.035	+			31142	QGFSNHVPQ	9	56	507.2430155624597	1012.4714781917194	2	507.2430114746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QGFSNHVPQ_	ENST00000327535.5_1_1:24482054-24482345:-|nuORF	45.02220120713402	0.3613509778819777	6				NaN	NaN	0	NaN	4635	2868	7499
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7506	22.526	NaN	6032.5	30	0	969.49	0.138			+	24654	LGTPHGSAM	9	56	435.71051765675605	869.4064823803121	2	435.7105712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LGTPHGSAM_	REV__tr|U7STK0|U7STK0_FUSNUUrocanatehydrataseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=hutUPE=3SV=1	50.0245360154114	0.3026755932229825	6				NaN	NaN	0	NaN	4636	2868	7499
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7524	22.566	NaN	23818	30	0	4677.5	0.214	+			278	AANVGRVV	8	67	393.23494680229044	NaN	0	393.23492431640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AANVGRVV_	ENSG00000162981|ENST00000295092|LRATD1	76.84663266511073	1.7418937515398478	6				NaN	NaN	0	NaN	4651	2871	7523
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7525	22.569	NaN	22465	30	0	3947.2	0.106	+			23519	LAHLHVSR	8	79	466.7744018515474	931.5342507698948	2	466.77410888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LAHLHVSR_	DNAJC13|p.G1667Vfs*22|1|0.33|ENSG00000138246|chr3:132505410-132505410|A/-|frameshift_variant;DNAJC13|p.T1375Hfs*28|1|0.18|ENSG00000138246|chr3:132496626-132496626|A/-|frameshift_variant;ENSG00000138246|ENST00000260818|DNAJC13	68.484700416344	0.4195245774506064	6				NaN	NaN	0	NaN	4652	2871	7523
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7526	22.572	NaN	31849	30	0	11131	0.106				-1	 	0	66	500.22910987926434	998.4436668253287	2	500.2288818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4653	2871	7523
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7527	22.573	NaN	44509	30	0	20228	0.106	+			8087	DVVVVLRTSEN	11	59	410.89459720334617	1229.6619622102385	3	410.8944091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DVVVVLRTSEN_	ENSG00000071909|ENST00000408978|MYO3B;ENST00000409940.6_1_2:171034716-171376051:+|nuORF;ENST00000438642.6_1_2:171034716-171400468:+|nuORF;ENST00000602629.1_1_2:171225816-171400468:+|nuORF;MYO3B|p.G1143Efs*93|1|0.19|ENSG00000071909|chr2:170514975-170514975|G/-|frameshift_variant;MYO3B|p.K1243Sfs*25|1|0.21|ENSG00000071909|chr2:170543980-170543980|A/-|frameshift_variant;MYO3B|p.S1144Kfs*12|1|0.37|ENSG00000071909|chr2:170514974-170514975|-/G|frameshift_variant;nc|ENSG00000071909|Q8WXR4-2|MYO3B;nc|ENSG00000071909|Q8WXR4-3|MYO3B;nc|ENSG00000071909|Q8WXR4-4|MYO3B;nc|ENSG00000071909|Q8WXR4-5|MYO3B;nc|ENSG00000071909|Q8WXR4-6|MYO3B;nc|ENSG00000071909|Q8WXR4-7|MYO3B	23.52269567125451	0.7430573033454468	6				NaN	NaN	0	NaN	4654	2871	7523
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7528	22.575	NaN	9906.1	30	0	1146.5	0.106	+			21270	KLNEVIVNK	9	82	528.8240431272279	1055.6335333212558	2	528.824462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KLNEVIVNK_	ENSG00000140199|ENST00000354181|SLC12A6;nc|ENSG00000140199|Q9UHW9-2|SLC12A6;nc|ENSG00000140199|Q9UHW9-3|SLC12A6;nc|ENSG00000140199|Q9UHW9-4|SLC12A6;nc|ENSG00000140199|Q9UHW9-5|SLC12A6;nc|ENSG00000140199|Q9UHW9-6|SLC12A6	195.04605151776784	5.427472092243166E-05	6				NaN	NaN	0	NaN	4655	2871	7523
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7529	22.577	NaN	52214	30	0	21547	0.035	+			45072	TVHNIIVGK	9	82	490.7980102468211	979.5814675604422	2	490.7978820800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TVHNIIVGK_	ENSG00000110048|ENST00000263847|OSBP;ENSG00000184792|ENST00000332585|OSBP2;nc|ENSG00000184792|Q969R2-2|OSBP2;nc|ENSG00000184792|Q969R2-3|OSBP2;nc|ENSG00000184792|Q969R2-4|OSBP2;nc|ENSG00000184792|Q969R2-5|OSBP2;nc|ENSG00000184792|Q969R2-6|OSBP2	117.81106730687013	0.02252488733980868	6				NaN	NaN	0	NaN	4656	2871	7523
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7530	22.578	NaN	4927.9	30	0	405.32	0.138			+	43451	TGLSVAAAAV	10	57	430.24771803086406	858.4808831285281	2	430.24749755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TGLSVAAAAV_	REV__ENST00000418609.5_1_4:186508579-186508693:-|nuORF	68.78682469695295	0.28723163847957256	6				NaN	NaN	0	NaN	4657	2871	7523
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7548	22.616	NaN	76132	30	0	6737	0.19	+			32991	REENKQIAL	9	85	550.8064843452614	1099.5984157573228	2	550.8067016601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_REENKQIAL_	ENSG00000198900|ENST00000361337|TOP1	96.0336014099291	0.047854655524928534	6				NaN	NaN	0	NaN	4672	2874	7547
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7549	22.619	NaN	74763	30	0	25513	0.09	+			5027	ATSDMDIGK	9	86	469.2181850599956	936.4218171867913	2	469.2181091308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATSDMDIGK_	ENSG00000102158|ENST00000618282|MAGT1	138.06239232086	0.011389075116295402	6				NaN	NaN	0	NaN	4673	2874	7547
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7550	22.621	NaN	169920	30	0	24034	0.106	+			37054	SIRVTQKSYK	10	135	417.9066963395326	1250.6982596187977	3	417.90655517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SIRVTQKSYK_	CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000550170.5_1_12:53294858-53298765:-|nuORF;KRT8|p.R18Gfs*56|1|0.24|ENSG00000170421|chr12:52904930-52904930|G/-|frameshift_variant;nc|ENSG00000170421|P05787-2|KRT8	112.2953585152457	0.0411829880542106	6				NaN	NaN	0	NaN	4674	2874	7547
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7551	22.622	NaN	14152	30	0	2016.7	0.106	+			12191	GAPHLCPNKK	10	87	532.7870654089203	1063.5595778846405	2	532.7875366210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GAPHLCPNKK_	ENST00000353704.2_2_9:35736733-35736859:+|nuORF	58.78195531508484	0.37691818691852547	6				NaN	NaN	0	NaN	4675	2874	7547
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7552	22.624	NaN	6554.6	30	0	3700.2	0.106	+			35083	SAFQAPAVKK	10	43	349.53795775745243	1045.5920438725573	3	349.5379638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SAFQAPAVKK_	ENSG00000067167|ENST00000262213|TRAM1;nc|ENSG00000067167|Q15629-2|TRAM1	55.08391021199286	0.41055145962533396	6				NaN	NaN	0	NaN	4676	2874	7547
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7553	22.626	NaN	1875.2	30	0	411.38	0.106			+	10326	ETSLWQPP	8	56	479.23854962536814	NaN	0	478.7555236816406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ETSLWQPP_	REV__ENSG00000162572|ENST00000379116|SCNN1D;REV__nc|ENSG00000162572|P51172-2|SCNN1D;REV__SCNN1D|p.S19Lfs*90|1|0.29|ENSG00000162572|chr1:1284070-1284071|-/G|frameshift_variant	45.9519527083369	1.7418937515398478	6				NaN	NaN	0	NaN	4677	2874	7547
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7554	22.628	NaN	3231.3	30	0	495.08	0.037	+			9609	ELLVGDGG	8	50	380.1972623371798	NaN	0	379.86572265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ELLVGDGG_	BRD8|p.P1065Lfs*29|1|0.14|ENSG00000112983|chr5:138149724-138149724|G/-|frameshift_variant;ENSG00000112983|ENST00000254900|BRD8	50.0245360154114	1.7418937515398478	6				NaN	NaN	0	NaN	4678	2874	7547
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7572	22.665	NaN	30787	30	0	9605.2	0.214			+	37811	SMLPCEPLTL	10	69	560.2746496282798	1118.5347463233595	2	560.2755737304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_SM(Oxidation (M))LPCEPLTL_	REV__ENSG00000148634|ENST00000373700|HERC4;REV__ENST00000427635.6_1_10:69747892-69752485:-|nuORF;REV__nc|ENSG00000148634|Q5GLZ8-3|HERC4;REV__nc|ENSG00000148634|Q5GLZ8-6|HERC4;REV__nc|ENSG00000148634|Q5GLZ8|HERC4	60.97194046774394	0.3570005369683776	6				NaN	NaN	0	NaN	4693	2877	7571
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7573	22.668	NaN	13641	30	0	1668.7	0.106	+			1617	AGMALGIQK	9	65	452.74953591757077	903.4845189019416	2	452.749267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_AGM(Oxidation (M))ALGIQK_	ENSG00000174851|ENST00000376901|YIF1A	148.20599733432147	0.007287282186870133	6				NaN	NaN	0	NaN	4694	2877	7571
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7574	22.67	NaN	8069.8	30	0	3185.6	0.106			+	12101	GACRAGRRLL	10	50	358.20978087276364	1071.607513218491	3	358.2097473144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GACRAGRRLL_	REV__ENST00000247461.8_1_5:179125991-179132738:+|nuORF;REV__ENST00000507307.5_1_5:179125985-179126592:+|nuORF	30.317721548370564	0.6322445173429027	6				NaN	NaN	0	NaN	4695	2877	7571
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7575	22.672	NaN	5825	30	0	875.29	0.106	+			33827	RQTSILIQK	9	78	543.8350779841967	NaN	0	543.8350830078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RQTSILIQK_	ENSG00000164266|ENST00000296695|SPINK1	74.1650062923329	0.09137789763820878	6				NaN	NaN	0	NaN	4696	2877	7571
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7576	22.674	NaN	14476	30	0	3095.8	0.106			+	-1	VIYHCFRRLLN	11	72	497.6072009595789	1489.7997734789367	3	497.6066589355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_VIYHC(Carbamidomethyl (C))FRRLLN_	REV__CACNA1B|p.P2044Lfs*125|1|0.41|ENSG00000148408|chr9:138120261-138120261|C/-|frameshift_variant;REV__ENSG00000148408|ENST00000371372|CACNA1B;REV__nc|ENSG00000148408|Q00975-2|CACNA1B	20.030474535948922	0.7766990143561855	6				NaN	NaN	0	NaN	4697	2877	7571
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7577	22.676	NaN	2547.9	30	0	428.04	0.035			+	16397	HEQHTRSN	8	60	504.7322944312524	1007.4500359293048	2	504.7317810058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HEQHTRSN_	REV__ENST00000304987.3_1_11:111595526-111595796:+|nuORF	40.77816245573522	0.6514838689002179	6				NaN	NaN	0	NaN	4698	2877	7571
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7578	22.676	NaN	3739.7	30	0	628.21	0.139			+	2076	ALAVLAAAAN	10	65	442.7635629471426	883.5125729610852	2	442.7633056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ALAVLAAAAN_	REV__ENSG00000173064|ENST00000682272|HECTD4;REV__HECTD4|p.A3108Gfs*4|1|0.12|ENSG00000173064|chr12:112185242-112185243|CC/-|frameshift_variant;REV__HECTD4|p.A3108Rfs*26|1|0.37|ENSG00000173064|chr12:112185242-112185242|C/-|frameshift_variant;REV__HECTD4|p.A4187Pfs*44|1|0.07|ENSG00000173064|chr12:112163201-112163201|C/-|frameshift_variant;REV__HECTD4|p.L1880Pfs*22|1|0.19|ENSG00000173064|chr12:112231674-112231675|-/TAGGA|frameshift_variant;REV__nc|ENSG00000173064|Q9Y4D8-5|HECTD4	73.97473282117947	0.24484687617201792	6				NaN	NaN	0	NaN	4699	2877	7571
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7596	22.715	NaN	229070	30	0	32016	0.214	+			4469	ATIQGAYAR	9	120	475.7561199390065	949.497686944813	2	475.75604248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATIQGAYAR_	ENSG00000109736|ENST00000355443|MFSD10;ENST00000508276.1_1_4:2933242-2933551:-|nuORF;ENST00000514031.5_1_4:2932567-2933551:-|nuORF	195.06343300570734	5.420119182691198E-05	6				NaN	NaN	0	NaN	4714	2880	7595
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7597	22.718	NaN	68114	30	0	20653	0.106	+			40934	SVFSDKLHSK	10	86	383.20848104368883	1146.6036137312665	3	383.20831298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVFSDKLHSK_	ENSG00000187257|ENST00000334955|RSBN1L;nc|ENSG00000187257|Q6PCB5-2|RSBN1L;PTPN12-RSBN1L|1|fusion;PTPN12-RSBN1L|2|fusion;PTPN12-RSBN1L|3|fusion;PTPN12-RSBN1L|4|fusion;PTPN12-RSBN1L|5|fusion;PTPN12-RSBN1L|6|fusion;PTPN12-RSBN1L|7|fusion;PTPN12-RSBN1L|8|fusion	50.79123845855914	0.44970922346023856	6				NaN	NaN	0	NaN	4715	2880	7595
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7598	22.721	NaN	18874	30	0	4604.1	0.106				-1	ETLMRINA	8	92	482.2497387691014	962.4849246050028	2	482.24981689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_ETLM(Oxidation (M))RINA_	ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1	102.7733458925114	0.2491487235419157	6				NaN	NaN	0	NaN	4716	2880	7595
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7599	22.722	NaN	60691	30	0	25047	0.106	+			22440	KTLDQAKAVLK	11	101	405.58721454051675	1213.7398142217503	3	405.58697509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTLDQAKAVLK_	ENSG00000135372|ENST00000257829|NAT10;nc|ENSG00000135372|Q9H0A0-2|NAT10	128.51354385984777	0.0038155586300478036	6				NaN	NaN	0	NaN	4717	2880	7595
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7600	22.724	NaN	6232	30	0	1411.3	0.106			+	-1	ISMMMTTV	8	63	465.21066377917685	928.4067746251537	2	465.2104797363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_ISM(Oxidation (M))MMTTV_	REV__ENSG00000163885|ENST00000352312|CFAP100;REV__nc|ENSG00000163885|Q494V2-2|CFAP100	38.80614096846853	0.6637206697844082	6				NaN	NaN	0	NaN	4718	2880	7595
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7601	22.726	NaN	1621.9	30	0	198.45	0.036	+			9341	EIMASVLNGK	10	61	531.285400390625	NaN	0	531.285400390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EIMASVLNGK_	CDC25A|p.G469Dfs*7|1|0.3|ENSG00000164045|chr3:48159372-48159372|C/-|frameshift_variant;ENSG00000164045|ENST00000302506|CDC25A;nc|ENSG00000164045|P30304-2|CDC25A	36.446750945000026	0.3805027428805705	6				NaN	NaN	0	NaN	4719	2880	7595
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7602	22.727	NaN	8113	30	0	4738.2	0.144			+	12654	GEIKLTMQQ	9	44	355.1865698467946	1062.5378801405839	3	355.18646240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_GEIKLTM(Oxidation (M))QQ_	REV__C3|p.A1045Pfs*26|1|0.09|ENSG00000125730|chr19:6694452-6694452|C/-|frameshift_variant;REV__C3|p.S1008Rfs*8|3|0.41|ENSG00000125730|chr19:6694564-6694564|G/-|frameshift_variant;REV__ENSG00000125730|ENST00000245907|C3	51.19269402634007	0.2889735674168909	6				NaN	NaN	0	NaN	4720	2880	7595
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7621	22.765	NaN	21810	30	0	10306	0.214	+			37970	SPHKGSYLY	9	73	526.2639691152008	1050.5133852972015	2	526.26416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SPHKGSYLY_	ENSG00000103089|ENST00000219368|FA2H;ENST00000562145.1_1_16:74748090-74750623:-|nuORF;nc|ENSG00000103089|Q7L5A8-2|FA2H	77.31757898189308	0.1091473830098891	6				NaN	NaN	0	NaN	4736	2883	7620
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7622	22.769	NaN	72604	30	0	33582	0.106	+			36974	SIMKWNRER	9	88	407.2170421604425	1218.6292970815275	3	407.55126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SIMKWNRER_	ENSG00000186010|ENST00000507754|NDUFA13;ENST00000511584.2_1_19:19627047-19637070:+|nuORF;ENST00000586674.1_1_19:19627047-19643527:+|nuORF;nc|ENSG00000186010|Q9P0J0-2|NDUFA13	55.08391021199286	0.2545954270840753	6				NaN	NaN	0	NaN	4737	2883	7620
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7623	22.771	NaN	11349	30	0	1461.1	0.106	+			13810	GQNIAVVGK	9	61	443.26116654542733	884.5077801576547	2	443.2608337402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GQNIAVVGK_	ENSG00000107036|ENST00000414202|RIC1;nc|ENSG00000107036|Q4ADV7-2|RIC1;RIC1|p.M978Ifs*8|1|0.04|ENSG00000107036|chr9:5765505-5765506|-/TTGGGAA|frameshift_variant;RIC1|p.M978Nfs*6|1|0.04|ENSG00000107036|chr9:5765503-5765504|-/A|frameshift_variant	134.81075121484326	0.012914550297035062	6				NaN	NaN	0	NaN	4738	2883	7620
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7624	22.773	NaN	7951.9	30	0	1255.5	0.106	+			44034	TPNEERNVM	9	75	545.2533098066101	1088.4920666800201	2	545.2537231445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TPNEERNVM_	ENSG00000184432|ENST00000333188|COPB2;nc|ENSG00000184432|P35606-2|COPB2	96.66504779109242	0.04607440320619715	6				NaN	NaN	0	NaN	4739	2883	7620
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7625	22.775	NaN	4669.8	30	0	1114.6	0.106	+			21608	KPMGKVVTY	9	70	511.7889010737594	1021.5632492143188	2	511.7889404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KPMGKVVTY_	ENSG00000108828|ENST00000355653|VAT1;nc|ENSG00000108828|Q99536-2|VAT1;nc|ENSG00000108828|Q99536-3|VAT1	87.69643885390035	0.07135982304947239	6				NaN	NaN	0	NaN	4740	2883	7620
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7626	22.776	NaN	13464	30	0	4026.8	0.035	+			15418	GTYHGMTLK	9	66	504.2524388792277	1006.4903248252555	2	504.2524108886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTYHGMTLK_	ENSG00000134371|ENST00000367435|CDC73	118.74307786436346	0.02196067127630568	6				NaN	NaN	0	NaN	4741	2883	7620
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7627	22.777	NaN	2668.1	30	0	338.31	0.138	+			28649	NLISAATGV	9	53	423.2400760094314	844.4655990856628	2	423.23992919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NLISAATGV_	ENSG00000103657|ENST00000443617|HERC1;HERC1|p.L3887Pfs*44|1|0.06|ENSG00000103657|chr15:63640394-63640395|-/ATGAATGG|frameshift_variant	49.44154591367651	0.3095138337212152	6				NaN	NaN	0	NaN	4742	2883	7620
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7645	22.815	NaN	12414	30	0	5014.8	0.214			+	9723	EMSQPRATL	9	66	516.759738563339	1031.504924193478	2	516.7592163085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EMSQPRATL_	REV__ENSG00000137501|ENST00000359152|SYTL2;REV__ENST00000438197.2_1_11:85444955-85468786:-|nuORF;REV__nc|ENSG00000137501|Q9HCH5-13|SYTL2;REV__nc|ENSG00000137501|Q9HCH5-14|SYTL2;REV__nc|ENSG00000137501|Q9HCH5-15|SYTL2;REV__nc|ENSG00000137501|Q9HCH5-6|SYTL2;REV__nc|ENSG00000137501|Q9HCH5|SYTL2;REV__SYTL2|p.Q663Tfs*35|1|0.14|ENSG00000137501|chr11:85709344-85709345|-/T|frameshift_variant	66.42927471994793	0.16001998865088202	6				NaN	NaN	0	NaN	4757	2886	7644
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7646	22.819	NaN	12760	30	0	1490.6	0.106	+			32862	RDCIAEAKL	9	85	509.7728335131575	1017.531114093115	2	509.7718505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RDCIAEAKL_	ENSG00000121053|ENST00000225371|EPX;EPX|p.C263Lfs*10|1|0.24|ENSG00000121053|chr17:58195149-58195150|-/C|frameshift_variant	63.53385203322761	0.18415635464017938	6				NaN	NaN	0	NaN	4758	2886	7644
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7647	22.821	NaN	22657	30	0	2588.7	0.106	+			33415	RIGNFIVKK	9	91	358.89760993770653	1073.6710004133197	3	358.8974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RIGNFIVKK_	ENSG00000140263|ENST00000267814|SORD;nc|ENSG00000140263|Q00796-2|SORD	68.78682469695295	0.14603441672067394	6				NaN	NaN	0	NaN	4759	2886	7644
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7648	22.823	NaN	15734	30	0	3225.5	0.106	+			10770	FAGDDAPRA	9	75	460.21736067917135	918.4201684251427	2	460.21697998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FAGDDAPRA_	ACTA1|p.G22D|1|0.25|ENSG00000143632|chr1:229433051-229433051|C/T|missense_variant;ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196604|ENST00000409914|POTEF;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000473016.1_1_2:74120109-74129648:+|nuORF;ENST00000477812.1_1_7:5569027-5569288:-|nuORF;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000482085.1_1_10:90708534-90712518:-|nuORF;ENST00000488967.5_1_10:90706975-90712518:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;POTEE|p.N792Kfs*34|1|0.2|ENSG00000188219|chr2:131263828-131263829|-/A|frameshift_variant	98.62937762414208	0.04060045538121712	6				NaN	NaN	0	NaN	4760	2886	7644
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7649	22.824	NaN	7083.7	30	0	1657.2	0.106			+	11743	FSGSGRLG	8	64	390.70376599120476	779.3929790492095	2	390.70343017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FSGSGRLG_	REV__ENST00000383811.7_1_3:9975536-9975776:+|nuORF	63.30626980617807	0.4690498839812213	6				NaN	NaN	0	NaN	4761	2886	7644
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7650	22.826	NaN	4131.3	30	0	1374.1	0.037			+	43542	THDTYNFDQ	9	61	570.7323340615488	1139.4501151898976	2	570.7326049804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_THDTYNFDQ_	REV__ENSG00000136928|ENST00000259455|GABBR2	27.882242232435846	0.5426732730940306	6				NaN	NaN	0	NaN	4762	2886	7644
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7651	22.827	NaN	3557.3	30	0	469.35	0.14	+			46421	VEQVVNGAL	9	60	464.7580779762331	NaN	0	464.758056640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VEQVVNGAL_	ENSG00000171813|ENST00000305233|PWWP2B;nc|ENSG00000171813|Q6NUJ5-2|PWWP2B;PWWP2B|p.D74Mfs*4|1|0.21|ENSG00000171813|chr10:132404716-132404716|G/-|frameshift_variant;PWWP2B|p.P86Lfs*100|1|0.35|ENSG00000171813|chr10:132404751-132404751|C/-|frameshift_variant	42.86426827375447	0.2558691296974908	6				NaN	NaN	0	NaN	4763	2886	7644
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7669	22.865	NaN	16798	30	0	2410.5	0.214	+			36156	SEKVDRAVL	9	74	508.7902912569286	NaN	0	508.79034423828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEKVDRAVL_	ENSG00000123240|ENST00000378747|OPTN;nc|ENSG00000123240|Q96CV9-2|OPTN;nc|ENSG00000123240|Q96CV9-3|OPTN	109.82975700811294	0.009850873779726326	6				NaN	NaN	0	NaN	4778	2889	7668
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7670	22.869	NaN	8103.3	30	0	1170.9	0.106			+	21731	KQLFRGVVK	9	82	537.8429035863064	1073.6712542394127	2	537.84326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KQLFRGVVK_	REV__tr|U7SJ60|U7SJ60_FUSNUGTPaseHflXOS=FusobacteriumnucleatumCTI-5OX=1316586GN=hflXPE=3SV=1	68.78682469695295	0.14603441672067394	6				NaN	NaN	0	NaN	4779	2889	7668
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7671	22.871	NaN	6374.2	30	0	1429.2	0.106			+	66	AAASLVQK	8	65	394.2366278216914	NaN	0	394.2372131347656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AAASLVQK_	REV__nc|ENSG00000175792|Q9Y265-2|RUVBL1	84.9155231211612	1.7418937515398478	6				NaN	NaN	0	NaN	4780	2889	7668
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7672	22.873	NaN	4769	30	0	1526.7	0.106	+			14635	GTGSAIPMK	9	57	431.22860203748235	860.4426511417647	2	431.2284240722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTGSAIPMK_	ENSG00000006744|ENST00000338034|ELAC2;ENST00000480891.5_1_17:12896137-12909314:-|nuORF;ENST00000484122.5_1_17:12899737-12920449:-|nuORF;nc|ENSG00000006744|Q9BQ52-2|ELAC2;nc|ENSG00000006744|Q9BQ52-3|ELAC2;nc|ENSG00000006744|Q9BQ52-4|ELAC2	104.74654710444128	0.034358562718640136	6				NaN	NaN	0	NaN	4781	2889	7668
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7673	22.875	NaN	5834.8	30	0	1117.8	0.106			+	46769	VGTVRDPLR	9	64	506.798473815502	1011.582394697804	2	506.7985534667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VGTVRDPLR_	REV__ENSG00000055957|ENST00000273283|ITIH1;REV__nc|ENSG00000055957|P19827-2|ITIH1;REV__nc|ENSG00000055957|P19827-3|ITIH1	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	4782	2889	7668
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7674	22.876	NaN	13848	30	0	1841.2	0.036	+			35167	SAIDSVNATSK	11	73	546.7803150092906	1091.546077085381	2	546.7804565429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SAIDSVNATSK_	ENSG00000111641|ENST00000322166|NOP2;ENST00000537708.1_1_12:6669555-6669804:-|nuORF;ENST00000544630.1_1_12:6669555-6669953:-|nuORF;nc|ENSG00000111641|P46087-2|NOP2;nc|ENSG00000111641|P46087-3|NOP2;nc|ENSG00000111641|P46087-4|NOP2	195.82877817392193	3.7791675325098806E-08	6				NaN	NaN	0	NaN	4783	2889	7668
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7675	22.877	NaN	14773	30	0	2505.7	0.139	+			33096	RELDGRTL	8	83	480.26704656064754	958.5195401880951	2	480.2666320800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RELDGRTL_	ENSG00000112081|ENST00000373715|SRSF3;nc|ENSG00000112081|P84103-2|SRSF3	75.04331003522576	0.3648751570195447	6				NaN	NaN	0	NaN	4784	2889	7668
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7693	22.915	NaN	69159	30	0	11938	0.214	+			23092	KVVDSLYNK	9	90	533.3005310443922	1064.5865091555843	2	533.30078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVVDSLYNK_	ENSG00000108671|ENST00000261712|PSMD11;ENST00000585265.1_1_17:30807457-30807646:+|nuORF;nc|ENSG00000108671|O00231-2|PSMD11	229.3272233562966	7.724902870478276E-13	6				NaN	NaN	0	NaN	4799	2892	7692
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7694	22.919	NaN	26441	30	0	4189.2	0.106	+			19901	KEFDGKSL	8	89	462.24561508100976	922.4766772288195	2	462.2449035644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEFDGKSL_	ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;ENST00000517330.1_1_5:77337712-77337985:-|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P;nc|ENSG00000205940|Q58FF8|HSP90AB2P;nc|ENSG00000282100|Q58FF6|HSP90AB4P	124.08010499294276	0.22872207833199332	6				NaN	NaN	0	NaN	4800	2892	7692
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7695	22.921	NaN	6160.2	30	0	644.38	0.106	+			16666	HIIATSKSL	9	65	485.28993543445404	968.5653179357081	2	485.2897644042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HIIATSKSL_	ENSG00000105856|ENST00000222574|HBP1;nc|ENSG00000105856|O60381-2|HBP1;nc|ENSG00000105856|O60381-3|HBP1	125.81401957644128	0.01768009863045738	6				NaN	NaN	0	NaN	4801	2892	7692
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7696	22.923	NaN	4702.2	30	0	1339.7	0.106			+	-1	FVCAQAAA	8	53	419.1980284078857	836.3815038825715	2	419.19805908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_FVC(Carbamidomethyl (C))AQAAA_	REV__ENSG00000182896|ENST00000576060|TMEM95;REV__nc|ENSG00000182896|Q3KNT9-2|TMEM95;REV__nc|ENSG00000182896|Q3KNT9-3|TMEM95	29.841539824830324	0.7289191502596711	6				NaN	NaN	0	NaN	4802	2892	7692
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7697	22.925	NaN	2088.4	30	0	357.37	0.106	+			41821	SVSSVSTLK	9	50	454.25826493762924	906.5019769420585	2	454.2580261230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVSSVSTLK_	ENSG00000117408|ENST00000372343|IPO13	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	4803	2892	7692
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7698	22.927	NaN	2858.7	30	0	367.68	0.033			+	49446	VVVNVKQG	8	61	421.7581539534768	841.5017549737536	2	421.7581481933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VVVNVKQG_	REV__ENSG00000169551|ENST00000276241|CT55;REV__nc|ENSG00000169551|Q8WUE5-2|CT55	42.47446043378293	0.6409579893742323	6				NaN	NaN	0	NaN	4804	2892	7692
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7699	22.927	NaN	2144.3	30	0	350.76	0.141			+	33290	RGMLAQRAAE	10	58	551.7929805665344	1101.5714081998688	2	551.7933959960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RGMLAQRAAE_	REV__ENSG00000155530|ENST00000285928|LRGUK	58.78195531508484	0.37691818691852547	6				NaN	NaN	0	NaN	4805	2892	7692
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7717	22.966	NaN	31768	30	0	3395.6	0.214	+			16435	HESGASIKI	9	80	471.2561026047736	940.4976522763473	2	471.25506591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HESGASIKI_	ENSG00000165119|ENST00000376263|HNRNPK;HNRNPK|p.R414C|1|0.56|ENSG00000165119|chr9:83970283-83970283|G/A|missense_variant;nc|ENSG00000165119|P61978-3|HNRNPK;nc|ENSG00000165119|P61978|HNRNPK	112.41091882917199	0.026537921851008135	6				NaN	NaN	0	NaN	4820	2895	7716
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7718	22.97	NaN	15074	30	0	2550.2	0.106	+			33443	RILACGVAK	9	76	465.78141974383607	929.5482865544722	2	465.7810363769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RILACGVAK_	ENSG00000265972|ENST00000582401|TXNIP	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	4821	2895	7716
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7719	22.972	NaN	13042	30	0	6093.2	0.106	+			610	ADSKKLESKLD	11	57	411.8935758345568	1232.6588981038706	3	411.8934326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ADSKKLESKLD_	ENSG00000100519|ENST00000445930|PSMC6	37.59989570853033	0.5907838038483115	6				NaN	NaN	0	NaN	4822	2895	7716
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7720	22.974	NaN	28119	30	0	8965	0.106	+			45299	TVSADPVVK	9	68	458.2609861939727	914.5074194547454	2	458.26092529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TVSADPVVK_	ENSG00000136051|ENST00000332180|WASHC4	115.49404669440601	0.023927554121326553	6				NaN	NaN	0	NaN	4823	2895	7716
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7721	22.976	NaN	2513.4	30	0	457.55	0.106	+			28347	NEKEDIHSL	9	68	542.7673087718226	1083.5200646104452	2	542.7673950195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NEKEDIHSL_	ENSG00000133739|ENST00000360375|LRRCC1;ENST00000523669.5_1_8:86025320-86042154:+|nuORF;LRRCC1|p.E880Rfs*15|1|0.15|ENSG00000133739|chr8:85138174-85138175|-/A|frameshift_variant;LRRCC1|p.K502Nfs*2|1|0.38|ENSG00000133739|chr8:85129254-85129254|A/-|frameshift_variant;LRRCC1|p.M531Nfs*28|1|0.39|ENSG00000133739|chr8:85129338-85129339|-/A|frameshift_variant;LRRCC1|p.T1013Nfs*7|2|0.2|ENSG00000133739|chr8:85145442-85145443|-/A|frameshift_variant;LRRCC1|p.T599Yfs*2|1|0.16|ENSG00000133739|chr8:85131781-85131782|-/T|frameshift_variant;LRRCC1|p.T701Nfs*8|1|0.21|ENSG00000133739|chr8:85134973-85134974|-/A|frameshift_variant;nc|ENSG00000133739|Q9C099-2|LRRCC1	63.53385203322761	0.18415635464017938	6				NaN	NaN	0	NaN	4824	2895	7716
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7722	22.978	NaN	1812.1	30	0	167.53	0.035			+	41234	SVLGATTGTGL	11	55	488.7685968302195	NaN	0	488.768798828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVLGATTGTGL_	REV__ASH1L|p.H1793Ifs*7|1|0.13|ENSG00000116539|chr1:155438778-155438778|G/-|frameshift_variant;REV__ASH1L|p.I970Lfs*9|1|0.2|ENSG00000116539|chr1:155479962-155479962|T/-|frameshift_variant;REV__ASH1L|p.K1222Rfs*11|4|0.27|ENSG00000116539|chr1:155479205-155479205|T/-|frameshift_variant;REV__ASH1L|p.K1533Sfs*17|1|0.25|ENSG00000116539|chr1:155478272-155478272|T/-|frameshift_variant;REV__ASH1L|p.K2377Nfs*5|1|0.28|ENSG00000116539|chr1:155354570-155354570|T/-|frameshift_variant;REV__ASH1L|p.N1822Tfs*2|1|0.33|ENSG00000116539|chr1:155438690-155438690|T/-|frameshift_variant;REV__ASH1L|p.R712Efs*23|3|0.35|ENSG00000116539|chr1:155480736-155480736|T/-|frameshift_variant;REV__ASH1L|p.S2309Ifs*11|1|0.64|ENSG00000116539|chr1:155357635-155357636|-/T|frameshift_variant;REV__ENSG00000116539|ENST00000392403|ASH1L;REV__nc|ENSG00000116539|Q9NR48|ASH1L	30.317721548370564	0.4303027717346894	6				NaN	NaN	0	NaN	4825	2895	7716
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7723	22.978	NaN	2808.8	30	0	451.22	0.143			+	26836	LVTTIALVR	9	47	329.21817958703684	984.6327093613106	3	329.2181701660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LVTTIALVR_	REV__ENSG00000163870|ENST00000355552|TPRA1;REV__nc|ENSG00000163870|Q86W33-2|TPRA1;REV__nc|ENSG00000163870|Q86W33-3|TPRA1	19.359975847455235	0.6112419832031293	6				NaN	NaN	0	NaN	4826	2895	7716
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7741	23.016	NaN	141240	30	0	35653	0.151	+			13834	GQSDIAITK	9	82	466.75597834459955	931.4974037559991	2	466.7557373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GQSDIAITK_	ENSG00000104738|ENST00000649973|MCM4	178.54760496737404	0.0014418427517892064	6				NaN	NaN	0	NaN	4841	2898	7740
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7742	23.019	NaN	24431	30	0	9804.3	0.106	+			4366	ATGSVFTGK	9	61	434.2322597205294	866.4499665078588	2	434.2320556640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATGSVFTGK_	ENSG00000126790|ENST00000247194|L3HYPDH	154.1183686248401	0.005909203230691971	6				NaN	NaN	0	NaN	4842	2898	7740
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7743	23.021	NaN	6041.5	30	0	1778.4	0.106	+			15930	HADPRIQGY	9	60	528.7648246823667	1055.5150964315333	2	528.765380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HADPRIQGY_	ENSG00000066322|ENST00000372458|ELOVL1;ENST00000464204.5_1_1:43830107-43833598:-|nuORF;ENST00000470968.6_1_1:43829589-43833598:-|nuORF;ENST00000479439.5_1_1:43830699-43831981:-|nuORF;ENST00000496932.1_1_1:43830832-43833598:-|nuORF;nc|ENSG00000066322|Q9BW60-2|ELOVL1	56.72105179125745	0.24094814563026265	6				NaN	NaN	0	NaN	4843	2898	7740
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7744	23.023	NaN	6932.4	30	0	2526.5	0.106	+			27400	MKRESELEL	9	53	378.86569906437103	1133.575267793313	3	378.865478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MKRESELEL_	ENSG00000100320|ENST00000695854|RBFOX2;nc|ENSG00000100320|O43251-6|RBFOX2;nc|ENSG00000100320|O43251-8|RBFOX2	32.81241826257853	0.4965981579233955	6				NaN	NaN	0	NaN	4844	2898	7740
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7745	23.025	NaN	6259.7	30	0	543.65	0.106	+			19825	KEDPKALAV	9	75	485.78217774019345	969.5498025471869	2	485.7819519042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEDPKALAV_	ENSG00000160049|ENST00000377038|DFFA	65.46538089061403	0.16805504838372562	6				NaN	NaN	0	NaN	4845	2898	7740
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7746	23.026	NaN	5362.9	30	0	685.15	0.106	+			16260	HEESREYSL	9	70	575.2622617352556	1148.5099705373111	2	575.2630004882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HEESREYSL_	ENSG00000173821|ENST00000582970|RNF213;nc|ENSG00000173821|Q63HN8-4|RNF213;nc|ENSG00000173821|Q63HN8|RNF213;RNF213|p.C5022Lfs*7|1|0.3|ENSG00000173821|chr17:80389237-80389237|G/-|frameshift_variant;RNF213|p.P2167Lfs*64|1|0.09|ENSG00000173821|chr17:80344834-80344835|-/T|frameshift_variant;RNF213|p.Q1953Rfs*50|2|0.13|ENSG00000173821|chr17:80340219-80340219|C/-|frameshift_variant	138.06239232086	0.011389075116295402	6				NaN	NaN	0	NaN	4846	2898	7740
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7747	23.028	NaN	2232.4	30	0	215.88	0.033			+	9008	EGAGGGISLI	10	58	437.2377006038045	872.460848274409	2	437.2374572753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EGAGGGISLI_	REV__ENSG00000150540|ENST00000280097|HNMT;REV__ENST00000467390.5_1_2:138722061-138759907:+|nuORF;REV__HNMT|p.Q192Pfs*3|1|0.33|ENSG00000150540|chr2:138013821-138013822|-/C|frameshift_variant	56.72105179125745	0.3956618550748046	6				NaN	NaN	0	NaN	4847	2898	7740
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7765	23.062	NaN	15682	30	0	7230.1	0.214	+			5813	AVIENLPKK	9	49	337.87806905510604	1010.6123777655182	3	337.87799072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVIENLPKK_	DDX10|p.I301Nfs*59|1|0.09|ENSG00000178105|chr11:108688982-108688983|-/A|frameshift_variant;ENSG00000178105|ENST00000322536|DDX10	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	4862	2901	7764
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7766	23.066	NaN	6161.4	30	0	1347.2	0.106	+			33601	RLPHSTAAL	9	64	483.2796821847512	964.5448114363024	2	483.27960205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RLPHSTAAL_	ENSG00000156521|ENST00000287078|TYSND1;nc|ENSG00000156521|Q2T9J0-2|TYSND1	68.84614121027924	0.14577793175421136	6				NaN	NaN	0	NaN	4863	2901	7764
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7767	23.068	NaN	8285.3	30	0	1975.6	0.106	+			41540	SVQCMPVAK	9	72	510.2542678320012	1018.4939827308024	2	510.2537841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SVQC(Carbamidomethyl (C))MPVAK_	ENSG00000160877|ENST00000292431|NACC1	72.87924865735499	0.12833875048249987	6				NaN	NaN	0	NaN	4864	2901	7764
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7768	23.069	NaN	4647	30	0	633.79	0.106	+			4470	ATIQGAYAR	9	58	475.7561199390065	949.497686944813	2	475.7560729980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATIQGAYAR_	ENSG00000109736|ENST00000355443|MFSD10;ENST00000508276.1_1_4:2933242-2933551:-|nuORF;ENST00000514031.5_1_4:2932567-2933551:-|nuORF	101.25262130126117	0.03792372629710479	6				NaN	NaN	0	NaN	4865	2901	7764
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7769	23.071	NaN	9826.1	30	0	1211.6	0.106			+	14751	GTKFEVINDK	10	71	384.20824602591324	1149.6029086779397	3	384.2080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTKFEVINDK_	REV__tr|U7SF25|U7SF25_FUSNUOutermembraneproteinbeta-barreldomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02369PE=4SV=1	39.873155843976775	0.5503138860789152	6				NaN	NaN	0	NaN	4866	2901	7764
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7770	23.073	NaN	4389.3	30	0	1091.4	0.106	+			31479	QLAEVCGGV	9	64	438.21822171785243	874.4218905025049	2	438.21795654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QLAEVCGGV_	tr|U7T6Q4|U7T6Q4_FUSNUElectrontransferflavoproteinalphasubunitOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00163PE=3SV=1	45.9519527083369	0.35044536499095585	6				NaN	NaN	0	NaN	4867	2901	7764
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7771	23.075	NaN	1540	30	0	372.66	0.036	+			25126	LLQPMMVDV	9	56	560.2746496282798	1118.5347463233595	2	560.2756958007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term),2 Oxidation (M)	_(Acetyl (Protein N-term))LLQPM(Oxidation (M))M(Oxidation (M))VDV_	ENST00000586180.1_1_19:3118803-3121174:+|nuORF	47.91560031466742	0.327412564698279	6				NaN	NaN	0	NaN	4868	2901	7764
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7789	23.11	NaN	60577	30	0	16516	0.198	+			5678	AVDTAYVAK	9	85	469.25314014049104	936.4917273477821	2	469.2528076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVDTAYVAK_	ENSG00000174851|ENST00000376901|YIF1A;ENST00000376899.8_1_11:66054976-66056456:-|nuORF;YIF1A|p.R131Gfs*50|3|0.43|ENSG00000174851|chr11:66287634-66287634|G/-|frameshift_variant	136.26810882979174	0.012230845423532208	6				NaN	NaN	0	NaN	4883	2904	7788
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7790	23.114	NaN	9915.8	30	0	3519.7	0.106	+			28208	NATKAYEM	8	67	464.21527458963516	926.4159962460703	2	464.21527099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NATKAYEM_	ENSG00000139433|ENST00000318348|GLTP	77.31757898189308	0.345924878368729	6				NaN	NaN	0	NaN	4884	2904	7788
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7791	23.116	NaN	5917.8	30	0	800.15	0.106			+	24040	LEGAPKVK	8	67	421.2607091484043	840.5068653636087	2	421.2606506347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LEGAPKVK_	REV__ADAM8|p.G501Afs*144|1|0.25|ENSG00000151651|chr10:133270943-133270943|C/-|frameshift_variant;REV__ENSG00000151651|ENST00000445355|ADAM8;REV__nc|ENSG00000151651|P78325-2|ADAM8;REV__nc|ENSG00000151651|P78325-3|ADAM8	60.97194046774394	0.49215940876911696	6				NaN	NaN	0	NaN	4885	2904	7788
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7792	23.118	NaN	6822.2	30	0	829.63	0.106			+	719	AEAVAISKE	9	64	459.2499217045845	916.485290475969	2	460.24945068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEAVAISKE_	REV__ENSG00000134602|ENST00000394334|STK26;REV__nc|ENSG00000134602|Q9P289-2|STK26;REV__nc|ENSG00000134602|Q9P289-3|STK26	79.45101966838831	0.09992237243120712	6				NaN	NaN	0	NaN	4886	2904	7788
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7793	23.119	NaN	11069	30	0	1176.1	0.106	+			35933	SEGIKHVL	8	69	441.7557369671786	881.4969210011573	2	441.755615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SEGIKHVL_	ENSG00000165475|ENST00000298248|CRYL1;nc|ENSG00000165475|Q9Y2S2-2|CRYL1	111.64827973302667	0.24425243057279236	6				NaN	NaN	0	NaN	4887	2904	7788
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7794	23.121	NaN	3211.3	30	0	676.82	0.106	+			41927	SVVNAPTPEA	10	56	492.7535275807391	983.4925022282782	2	492.7532958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVVNAPTPEA_	ENST00000506839.1_1_4:9987396-10020676:-|nuORF	33.921630207806714	0.6028135429846169	6				NaN	NaN	0	NaN	4888	2904	7788
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7795	23.123	NaN	10113	30	0	4425.7	0.038	+			36975	SIMKWNRER	9	66	407.2170421604425	1218.6292970815275	3	407.21697998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SIMKWNRER_	ENSG00000186010|ENST00000507754|NDUFA13;ENST00000511584.2_1_19:19627047-19637070:+|nuORF;ENST00000586674.1_1_19:19627047-19643527:+|nuORF;nc|ENSG00000186010|Q9P0J0-2|NDUFA13	42.86426827375447	0.38666266728046506	6				NaN	NaN	0	NaN	4889	2904	7788
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7813	23.16	NaN	24609	30	0	2602.1	0.214				-1	 	0	81	589.5946728908615	1765.7621892727843	3	589.5946655273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4904	2907	7812
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7814	23.164	NaN	5502.6	30	0	482.64	0.106	+			49733	VYNNNSSRF	9	72	550.7596222712633	1099.5046916093265	2	550.760009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYNNNSSRF_	ENSG00000145555|ENST00000513610|MYO10;MYO10|p.G1223Rfs*28|1|0.25|ENSG00000145555|chr5:16694504-16694505|-/T|frameshift_variant;MYO10|p.I417Tfs*39|1|0.05|ENSG00000145555|chr5:16764326-16764327|-/ACAAATCTCTG|frameshift_variant;MYO10|p.N507Qfs*30|1|0.11|ENSG00000145555|chr5:16762613-16762614|-/TG|frameshift_variant;MYO10|p.S468Ffs*8|1|0.05|ENSG00000145555|chr5:16763679-16763680|-/A|frameshift_variant	80.45461616416974	0.09558281504443908	6				NaN	NaN	0	NaN	4905	2907	7812
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7815	23.166	NaN	4210.3	30	0	884.67	0.106			+	10417	EVHEPDKLG	9	66	512.2584048735621	1022.5022568139242	2	512.2590942382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EVHEPDKLG_	REV__ENSG00000278570|ENST00000617575|NR2E3;REV__nc|ENSG00000278570|Q9Y5X4-2|NR2E3	47.657333605630114	0.33044192980041115	6				NaN	NaN	0	NaN	4906	2907	7812
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7816	23.167	NaN	7599.6	30	0	1323.8	0.106	+			19738	KDVEQRLI	8	71	500.7928160042004	999.5710790752008	2	500.79290771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KDVEQRLI_	tr|U7SGD6|U7SGD6_FUSNULysMdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02265PE=4SV=1	74.25504064058377	0.37144338840759816	6				NaN	NaN	0	NaN	4907	2907	7812
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7817	23.169	NaN	6373.4	30	0	2583.1	0.106	+			3436	ASQLRHEGNR	10	47	389.8718583921312	1166.5937457765936	3	389.8715515136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASQLRHEGNR_	ENSG00000175556|ENST00000371628|LONRF3;nc|ENSG00000175556|Q496Y0-2|LONRF3;nc|ENSG00000175556|Q496Y0-3|LONRF3	28.081489160057373	0.6505064946289502	6				NaN	NaN	0	NaN	4908	2907	7812
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7818	23.171	NaN	2204.6	30	0	220.66	0.034	+			47890	VSLGYVVID	9	57	482.76884454512515	NaN	0	482.7686767578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VSLGYVVID_	ENST00000507854.1_1_4:420846-467772:-|nuORF	38.80614096846853	0.28164298475537564	6				NaN	NaN	0	NaN	4909	2907	7812
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7819	23.172	NaN	5236.7	30	0	1128.6	0.143	+			47779	VSHQLRAFI	9	52	357.5416381160261	1069.6030849482784	3	357.5416259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VSHQLRAFI_	ENST00000514042.1_1_5:79368411-79378328:-|nuORF	31.954861631926434	0.5046124803899898	6				NaN	NaN	0	NaN	4910	2907	7812
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7837	23.211	NaN	10682	30	0	1325.5	0.214	+			33959	RSCVVIIQK	9	86	551.8237047903925	1101.632856647585	2	551.8241577148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_RSC(Carbamidomethyl (C))VVIIQK_	ASPM|p.I1717Nfs*24|1|0.43|ENSG00000066279|chr1:197104101-197104102|-/T|frameshift_variant;ASPM|p.I3229Nfs*2|1|0.48|ENSG00000066279|chr1:197090339-197090340|-/T|frameshift_variant;ASPM|p.L1872Ffs*24|1|0.43|ENSG00000066279|chr1:197103635-197103636|-/A|frameshift_variant;ASPM|p.M2261*|1|0.44|ENSG00000066279|chr1:197102470-197102470|T/-|frameshift_variant;ASPM|p.N1680Kfs*11|1|0.33|ENSG00000066279|chr1:197104211-197104212|-/T|frameshift_variant;ASPM|p.Q2620Nfs*22|1|0.15|ENSG00000066279|chr1:197101393-197101394|-/TT|frameshift_variant;ASPM|p.Q2620Tfs*17|1|0.19|ENSG00000066279|chr1:197101393-197101394|-/T|frameshift_variant;ENSG00000066279|ENST00000367409|ASPM	80.45461616416974	0.09558281504443908	6				NaN	NaN	0	NaN	4925	2910	7836
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7838	23.215	NaN	6395.8	30	0	765.36	0.106	+			34627	RVQDYIQSK	9	74	568.8067632291152	1135.5989735250303	2	568.8068237304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RVQDYIQSK_	ENSG00000123836|ENST00000367080|PFKFB2;ENST00000411990.6_1_1:207235951-207252361:+|nuORF;nc|ENSG00000123836|O60825-2|PFKFB2	131.61620852596164	0.014413238321579053	6				NaN	NaN	0	NaN	4926	2910	7836
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7839	23.217	NaN	10602	30	0	2970.1	0.106	+			4501	ATITERGITSR	11	59	402.22650247491845	1203.6576780249554	3	402.22625732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATITERGITSR_	EMC1|p.F974Lfs*4|1|0.22|ENSG00000127463|chr1:19219363-19219363|A/-|frameshift_variant;ENSG00000127463|ENST00000477853|EMC1;nc|ENSG00000127463|Q8N766-2|EMC1;nc|ENSG00000127463|Q8N766-3|EMC1;nc|ENSG00000127463|Q8N766-4|EMC1	68.62578634547417	0.24719609611953774	6				NaN	NaN	0	NaN	4927	2910	7836
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7840	23.219	NaN	3624.3	30	0	1065	0.106			+	4540	ATLAISSK	8	60	395.737254234841	789.459955536482	2	395.7369384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATLAISSK_	REV__ENSG00000049618|ENST00000636930|ARID1B;REV__nc|ENSG00000049618|Q8NFD5-1|ARID1B;REV__nc|ENSG00000049618|Q8NFD5-2|ARID1B;REV__nc|ENSG00000049618|Q8NFD5|ARID1B	65.80317337860623	0.44433089765398776	6				NaN	NaN	0	NaN	4928	2910	7836
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7841	23.22	NaN	2818.5	30	0	419.14	0.106			+	45713	VAALSVKSAI	10	71	479.8002253579927	957.5858977827854	2	479.7998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VAALSVKSAI_	REV__ABCB5|p.G292A|1|0.35|ENSG00000004846|chr7:20646032-20646032|G/C|missense_variant	35.15202426646627	0.5927656479315102	6				NaN	NaN	0	NaN	4929	2910	7836
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7842	23.222	NaN	5736.5	30	0	2236.2	0.034	+			18867	IVGGSSVYK	9	52	455.25578700737157	908.4970210815432	2	455.2552795410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IVGGSSVYK_	ENSG00000178700|ENST00000314636|DHFR2;ENSG00000228716|ENST00000439211|DHFR;nc|ENSG00000228716|P00374-2|DHFR	54.776311868738084	0.25715957988447635	6				NaN	NaN	0	NaN	4930	2910	7836
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7843	23.223	NaN	9602.5	30	0	1593.6	0.143				-1	IGKALMVPVAV	11	82	371.8958958803137	1112.665858241141	3	372.2295227050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_IGKALM(Oxidation (M))VPVAV_	tr|U7T8A7|U7T8A7_FUSNUPTSsystem,N-acetylglucosamine-specificIIBCcomponentOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00177PE=4SV=1	53.08895987439943	0.38514566451266113	6				NaN	NaN	0	NaN	4931	2910	7836
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7863	23.261	NaN	7119.5	30	0	1971.3	0.214			+	-1	QNSIVTFCP	9	71	533.255707727173	1064.4968625211459	2	533.2561645507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_QNSIVTFC(Carbamidomethyl (C))P_	REV__ENSG00000166147|ENST00000316623|FBN1	79.71258880314673	0.09879134589249085	6				NaN	NaN	0	NaN	4948	2913	7862
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7864	23.265	NaN	9568.2	30	0	2832.2	0.106			+	38909	SSPPQRYGVL	10	56	368.53310515572275	1102.5774860673682	3	368.5329284667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSPPQRYGVL_	REV__ENSG00000184221|ENST00000382348|OLIG1	28.081489160057373	0.6505064946289502	6				NaN	NaN	0	NaN	4949	2913	7862
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7865	23.267	NaN	6461	30	0	2103.9	0.106	+			8345	EAKSVKVKI	9	43	334.5500629767837	1000.628359530551	3	334.5500183105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EAKSVKVKI_	ENSG00000080503|ENST00000349721|SMARCA2;nc|ENSG00000080503|P51531-2|SMARCA2	15.641811463095205	0.6112419832031292	6				NaN	NaN	0	NaN	4950	2913	7862
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7866	23.269	NaN	3189.8	30	0	370.21	0.106	+			4334	ATGLVLNR	8	61	422.2560278848228	842.4975028364456	2	422.2559814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATGLVLNR_	ENSG00000183569|ENST00000327678|SERHL2;nc|ENSG00000183569|Q9H4I8-2|SERHL2;nc|ENSG00000183569|Q9H4I8-3|SERHL2	45.9519527083369	0.6193794311207887	6				NaN	NaN	0	NaN	4951	2913	7862
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7867	23.27	NaN	2088.9	30	0	176.39	0.106	+			18312	IPTHVRAQY	9	65	542.7988946833688	1083.5832364335374	2	542.7993774414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IPTHVRAQY_	ENSG00000243709|ENST00000272134|LEFTY1	51.19269402634007	0.2889735674168909	6				NaN	NaN	0	NaN	4952	2913	7862
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7868	23.272	NaN	5299	30	0	900.66	0.106	+			39031	SSSLPVSAEK	10	62	502.76642935503696	NaN	0	502.7668151855469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSSLPVSAEK_	ENSG00000089177|ENST00000354981|KIF16B;KIF16B|p.F1272Sfs*3|1|0.36|ENSG00000089177|chr20:16273392-16273392|A/-|frameshift_variant;nc|ENSG00000089177|Q96L93-2|KIF16B;nc|ENSG00000089177|Q96L93-4|KIF16B;nc|ENSG00000089177|Q96L93-5|KIF16B;nc|ENSG00000089177|Q96L93-6|KIF16B	78.26377905018397	0.10800580676963668	6				NaN	NaN	0	NaN	4953	2913	7862
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7869	23.274	NaN	6313.6	30	0	1031.1	0.037	+			33453	RINVPMVRK	9	56	371.56232540105657	NaN	0	371.5630798339844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RINVPMVRK_	DLC1|p.Q1096Sfs*33|1|0.29|ENSG00000164741|chr8:13095127-13095127|G/-|frameshift_variant;DLC1|p.S830Rfs*7|1|0.33|ENSG00000164741|chr8:13099850-13099850|G/-|frameshift_variant;ENSG00000164741|ENST00000276297|DLC1;nc|ENSG00000164741|Q96QB1-1|DLC1;nc|ENSG00000164741|Q96QB1-4|DLC1;nc|ENSG00000164741|Q96QB1-6|DLC1	40.05817265558897	0.275207446262312	6				NaN	NaN	0	NaN	4954	2913	7862
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7887	23.312	NaN	61527	30	0	14362	0.214	+			44865	TTVDIFHKK	9	87	363.54135503501294	1087.6022357052389	3	363.54144287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTVDIFHKK_	ENSG00000158411|ENST00000289359|MITD1	54.722347961057174	0.257609425301511	6				NaN	NaN	0	NaN	4969	2916	7886
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7888	23.315	NaN	4861.7	30	0	604.29	0.106	+			15977	HAIMRSPQM	9	71	535.765067917902	1069.515582902604	2	535.7659912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HAIMRSPQM_	CTNNB1|p.L301Hfs*16|1|0.05|ENSG00000168036|chr3:41225827-41225831|TTCAA/-|frameshift_variant;CTNNB1|p.M271Wfs*5|1|0.08|ENSG00000168036|chr3:41225733-41225733|A/-|frameshift_variant;ENSG00000168036|ENST00000349496|CTNNB1	77.31757898189308	0.1091473830098891	6				NaN	NaN	0	NaN	4970	2916	7886
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7889	23.317	NaN	11703	30	0	1454.5	0.106	+			40805	SVDVHQVYK	9	86	537.7825271719723	1073.5505014107446	2	537.7827758789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVDVHQVYK_	ENSG00000186314|ENST00000683046|PRELID2;ENST00000394450.6_1_5:145205751-145214847:-|nuORF;ENST00000515475.1_1_5:145199495-145214847:-|nuORF;nc|ENSG00000186314|Q8N945|PRELID2;PRELID2|p.N28Tfs*10|1|0.28|ENSG00000186314|chr5:145823129-145823129|G/-|frameshift_variant	101.25262130126117	0.03792372629710479	6				NaN	NaN	0	NaN	4971	2916	7886
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7890	23.319	NaN	6208.2	30	0	1130.3	0.106	+			5776	AVGPPTTVR	9	62	449.26109469836183	896.5076364635237	2	449.26104736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVGPPTTVR_	ENSG00000137573|ENST00000402687|SULF1;ENST00000521946.5_1_8:70505207-70554528:+|nuORF	42.396135135203025	0.392153681582562	6				NaN	NaN	0	NaN	4972	2916	7886
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7891	23.321	NaN	19725	30	0	7022.5	0.106			+	30274	PTFKVKVSKK	10	79	387.9168665517391	1160.7287702554172	3	387.91650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PTFKVKVSKK_	REV__ENSG00000075568|ENST00000186436|TMEM131;REV__TMEM131|p.E934K|1|0.09|ENSG00000075568|chr2:97797435-97797435|C/T|missense_variant;REV__TMEM131|p.L1469Tfs*5|1|0.43|ENSG00000075568|chr2:97772340-97772341|-/T|frameshift_variant	42.33807565288922	0.5276008846745733	6				NaN	NaN	0	NaN	4973	2916	7886
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7892	23.323	NaN	13642	30	0	5483.7	0.038	+			51475	YVHDDGRVSY	10	68	605.7780283675162	1209.5415038018323	2	605.7781372070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YVHDDGRVSY_	ENSG00000130755|ENST00000597595|GMFG;ENST00000601731.1_1_19:39819119-39826633:-|nuORF	157.3448221729694	0.007191409758142479	6				NaN	NaN	0	NaN	4974	2916	7886
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7893	23.323	NaN	50485	30	0	6982.4	0.141	+			16159	HEAERNIAL	9	85	526.7778600837288	NaN	0	526.7781372070312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HEAERNIAL_	ENSG00000015568|ENST00000016946|RGPD5;ENSG00000153165|ENST00000409886|RGPD3;ENSG00000153201|ENST00000283195|RANBP2;ENSG00000169629|ENST00000302558|RGPD8;ENSG00000183054|ENST00000329516|RGPD6;ENSG00000185304|ENST00000398146|RGPD2;ENSG00000187627|ENST00000641458|RGPD1;ENSG00000196862|ENST00000408999|RGPD4;nc|ENSG00000183054|Q99666-2|RGPD5;nc|ENSG00000187627|P0DJD0|RGPD1;nc|ENSG00000196862|Q7Z3J3-2|RGPD4;RANBP2|p.A864Lfs*3|1|0.3|ENSG00000153201|chr2:108758533-108758533|G/-|frameshift_variant;RANBP2|p.C2737Vfs*35|1|0.18|ENSG00000153201|chr2:108772957-108772957|T/-|frameshift_variant;RANBP2|p.F3068Lfs*10|1|0.06|ENSG00000153201|chr2:108782692-108782692|T/-|frameshift_variant;RANBP2|p.H3114Sfs*18|1|0.33|ENSG00000153201|chr2:108782827-108782828|-/T|frameshift_variant;RANBP2|p.K1989Nfs*9|1|0.05|ENSG00000153201|chr2:108766505-108766506|-/TATCCTG|frameshift_variant;RANBP2|p.K2576Nfs*63|2|0.22|ENSG00000153201|chr2:108768262-108768262|A/-|frameshift_variant;RANBP2|p.S1486Rfs*51|1|0.05|ENSG00000153201|chr2:108764996-108764997|-/ATTTTGTATTC|frameshift_variant;RGPD2|p.F1350Lfs*25|1|0.25|ENSG00000185304|chr2:87782974-87782974|A/-|frameshift_variant;RGPD3|p.V1441*|1|0.45|ENSG00000153165|chr2:106423647-106423647|T/-|frameshift_variant;RGPD4|p.K568Nfs*33|1|0.14|ENSG00000196862|chr2:107859787-107859787|A/-|frameshift_variant	98.58198989935565	0.02429614701295995	6				NaN	NaN	0	NaN	4975	2916	7886
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7911	23.363	NaN	32417	30	0	17837	0.214			+	23703	LATQWPVQK	9	78	357.5382744454826	1069.5929939366479	3	357.53802490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LATQWPVQK_	REV__tr|U7SUG6|U7SUG6_FUSNUMFStransporter,AGZAfamily,xanthine/uracilpermeaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01415PE=3SV=1	37.81151784470057	0.4459294069877048	6				NaN	NaN	0	NaN	4990	2919	7910
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7912	23.366	NaN	8143.3	30	0	1323	0.106	+			8510	EATKAVTEM	9	62	490.24186741810473	978.4691819030095	2	490.2415466308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EATKAVTEM_	ENSG00000070756|ENST00000318607|PABPC1;ENSG00000090621|ENST00000372858|PABPC4;ENSG00000101104|ENST00000217073|PABPC1L;ENSG00000151846|ENST00000281589|PABPC3;ENST00000476056.5_1_20:43550276-43561823:+|nuORF;ENST00000490798.5_1_20:43550276-43564067:+|nuORF;nc|ENSG00000070756|P11940-2|PABPC1;nc|ENSG00000090621|Q13310-2|PABPC4;nc|ENSG00000090621|Q13310|PABPC4;nc|ENSG00000101104|Q4VXU2|PABPC1L	157.32903759742106	0.0051608477690748295	6				NaN	NaN	0	NaN	4991	2919	7910
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7913	23.368	NaN	10033	30	0	1703.8	0.106	+			36840	SIFEPAKGGEK	11	70	581.8089830448567	1161.6034131565134	2	581.8087768554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SIFEPAKGGEK_	ENSG00000160710|ENST00000368474|ADAR;nc|ENSG00000160710|P55265-2|ADAR;nc|ENSG00000160710|P55265-3|ADAR;nc|ENSG00000160710|P55265-4|ADAR;nc|ENSG00000160710|P55265-5|ADAR	122.17797606160879	0.015994264420551	6				NaN	NaN	0	NaN	4992	2919	7910
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7914	23.37	NaN	9752.7	30	0	1945.9	0.106	+			19746	KDVKVQVM	8	79	473.7728813517639	NaN	0	473.7728271484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KDVKVQVM_	ENSG00000131236|ENST00000372805|CAP1;ENST00000461993.1_1_1:40535258-40537202:+|nuORF;nc|ENSG00000131236|Q01518-2|CAP1	125.81401957644128	1.7418937515398478	6				NaN	NaN	0	NaN	4993	2919	7910
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7915	23.372	NaN	11687	30	0	3327.5	0.106	+			39423	STDSDSFVK	9	80	493.2273777250838	984.4402025169676	2	493.22711181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STDSDSFVK_	ENSG00000106608|ENST00000453200|URGCP;nc|ENSG00000106608|Q8TCY9-2|URGCP;nc|ENSG00000106608|Q8TCY9-3|URGCP;nc|ENSG00000106608|Q8TCY9-4|URGCP;URGCP|p.P521Lfs*8|1|0.22|ENSG00000106608|chr7:43877901-43877901|G/-|frameshift_variant	82.7504851949679	0.08565546331141553	6				NaN	NaN	0	NaN	4994	2919	7910
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7916	23.374	NaN	5273.1	30	0	528.05	0.033			+	12085	GAALLWKQ	8	60	443.76068738448896	885.5068218357779	2	443.76031494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GAALLWKQ_	REV__ENSG00000166340|ENST00000299427|TPP1;REV__ENST00000428886.6_1_11:6638445-6640631:-|nuORF;REV__TPP1|p.I484Sfs*4|1|0.24|ENSG00000166340|chr11:6614968-6614968|C/-|frameshift_variant	52.29916861842294	0.578018602984656	6				NaN	NaN	0	NaN	4995	2919	7910
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7917	23.374	NaN	17290	30	0	4651.8	0.139	+			49365	VVSSTVVTAA	10	76	467.2661493559695	932.517745778739	2	467.26556396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VVSSTVVTAA_	ENST00000372504.5_2_1:43314964-43315012:+|nuORF	104.74654710444128	0.06360088227210728	6				NaN	NaN	0	NaN	4996	2919	7910
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7935	23.412	NaN	99393	30	0	17398	0.214	+			4491	ATITDKELLKK	11	100	420.5905526391832	1258.7498285177496	3	420.5903625488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATITDKELLKK_	ENSG00000131503|ENST00000360839|ANKHD1;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	94.81966064512906	0.07904432929123503	6				NaN	NaN	0	NaN	5011	2922	7934
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7936	23.415	NaN	28827	30	0	5082	0.106	+			4628	ATLNVSTTR	9	92	481.7666232887775	961.518693644355	2	481.7664794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATLNVSTTR_	ENSG00000088448|ENST00000267339|ANKRD10;ENST00000460846.1_1_13:111557570-111567134:-|nuORF;nc|ENSG00000088448|Q9NXR5-2|ANKRD10	187.50397467658743	0.0005427347354732084	6				NaN	NaN	0	NaN	5012	2922	7934
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7937	23.417	NaN	28091	30	0	16725	0.106	+			336	AAPTVRAPA	9	55	427.24810815882904	852.4816633844581	2	427.2479248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AAPTVRAPA_	ENST00000428449.5_1_7:121945734-121946145:+|nuORF	45.9519527083369	0.35044536499095585	6				NaN	NaN	0	NaN	5013	2922	7934
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7938	23.419	NaN	43635	30	0	27690	0.106	+			32632	QYTHKIYHL	9	56	401.54860808957835	1201.6239948689351	3	401.548583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QYTHKIYHL_	ENSG00000174238|ENST00000313486|PITPNA;ENSG00000180957|ENST00000335272|PITPNB;ENST00000460566.5_1_22:28293057-28315179:-|nuORF;ENST00000471825.1_1_22:28306950-28315179:-|nuORF;nc|ENSG00000180957|P48739-2|PITPNB;nc|ENSG00000180957|P48739-3|PITPNB	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	5014	2922	7934
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7939	23.421	NaN	10409	30	0	1196.4	0.106			+	33186	REVINALK	8	86	471.79025939244116	941.5659658516823	2	471.7898864746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_REVINALK_	REV__ENSG00000116525|ENST00000291416|TRIM62	60.11826168202944	0.5006107059937851	6				NaN	NaN	0	NaN	5015	2922	7934
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7940	23.423	NaN	6712.3	30	0	1762.4	0.034	+			40555	SVADPGQLK	9	61	457.75057178410464	913.4865906350093	2	457.7506103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVADPGQLK_	ENSG00000142765|ENST00000616558|SYTL1;ENST00000483926.5_1_1:27668800-27676624:+|nuORF;nc|ENSG00000142765|Q8IYJ3-2|SYTL1	41.42661286455405	0.403525789677298	6				NaN	NaN	0	NaN	5016	2922	7934
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7941	23.423	NaN	4503.2	30	0	682.84	0.139			+	-1	NASMLKKL	8	62	460.7634739181368	919.5123949030736	2	460.7632141113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_NASM(Oxidation (M))LKKL_	REV__ENSG00000164070|ENST00000296464|HSPA4L;REV__ENSG00000170606|ENST00000304858|HSPA4;REV__HSPA4|p.S737Afs*9|1|0.18|ENSG00000170606|chr5:133103911-133103911|A/-|frameshift_variant;REV__HSPA4L|p.G575Efs*18|1|0.36|ENSG00000164070|chr4:127820470-127820470|A/-|frameshift_variant	52.936696900407355	0.5717071646657654	6				NaN	NaN	0	NaN	5017	2922	7934
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7959	23.461	NaN	242260	30	0	130420	0.186	+			17398	IAPTGHSL	8	61	398.221665667628	794.428778402056	2	398.2214660644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IAPTGHSL_	ENSG00000125354|ENST00000394610|SEPTIN6;ENSG00000138758|ENST00000264893|SEPTIN11;nc|ENSG00000125354|Q14141-3|SEPTIN6;nc|ENSG00000125354|Q14141-4|SEPTIN6;nc|ENSG00000125354|Q14141|SEPTIN6;nc|ENSG00000138758|Q9NVA2-2|SEPTIN11	88.64286706044652	0.2815785716369046	6				NaN	NaN	0	NaN	5032	2925	7958
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7960	23.464	NaN	15708	30	0	10477	0.106	+			323	AAPSAAREL	9	57	443.24305585376504	884.4715587743301	2	443.24285888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAPSAAREL_	ENSG00000107960|ENST00000224950|STN1	70.8162118820467	0.13725933411854815	6				NaN	NaN	0	NaN	5033	2925	7958
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7961	23.467	NaN	4602.1	30	0	772.71	0.106	+			1778	AICRVQVMVV	10	64	373.2119124891754	1116.6139080677262	3	373.2117919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AICRVQVMVV_	nc|ENSG00000114125|Q9UBF6-4|RNF7	41.42661286455405	0.5359995577334734	6				NaN	NaN	0	NaN	5034	2925	7958
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7962	23.468	NaN	7036.7	30	0	1169.4	0.106	+			756	AEEKAAVL	8	62	415.73454673996036	NaN	0	415.7345886230469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEEKAAVL_	ENSG00000105357|ENST00000642316|MYH14;MYH14|p.L1950Sfs*14|1|0.34|ENSG00000105357|chr19:50309646-50309646|C/-|frameshift_variant;nc|ENSG00000105357|Q7Z406-6|MYH14;nc|ENSG00000105357|Q7Z406|MYH14	64.20726635412375	1.7418937515398478	6				NaN	NaN	0	NaN	5035	2925	7958
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7963	23.47	NaN	5759.8	30	0	1030.9	0.106	+			45267	TVQHGAVY	8	62	437.72473982878375	873.4349267243675	2	437.7243957519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TVQHGAVY_	ENSG00000143751|ENST00000272091|SDE2	40.5726180659479	0.6527593143185008	6				NaN	NaN	0	NaN	5036	2925	7958
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7964	23.472	NaN	3531.3	30	0	440.3	0.106				-1	 	0	67	595.5980581718698	1783.772345115809	3	595.5982055664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5037	2925	7958
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7965	23.474	NaN	3574.2	30	0	667.07	0.034			+	44310	TSEPATPQL	9	58	472.2396415807564	942.4647302283129	2	472.2398376464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TSEPATPQL_	REV__ENSG00000050344|ENST00000056233|NFE2L3;REV__ENST00000606261.1_1_7:26224125-26225400:+|nuORF;REV__NFE2L3|p.G654Rfs*2|1|0.18|ENSG00000050344|chr7:26185655-26185656|-/A|frameshift_variant	53.351449002276354	0.2690372970092375	6				NaN	NaN	0	NaN	5038	2925	7958
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7983	23.511	NaN	24573	30	0	4397.3	0.214	+			39139	SSVGSVITK	9	75	439.2531281464885	876.491703359777	2	439.2528076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSVGSVITK_	ENSG00000076554|ENST00000518937|TPD52;ENST00000517445.5_1_8:80962678-80964851:-|nuORF;ENST00000521354.5_1_8:80950353-81083761:-|nuORF;ENST00000522364.5_1_8:80963727-80992703:-|nuORF;nc|ENSG00000076554|P55327-2|TPD52;nc|ENSG00000076554|P55327-3|TPD52;nc|ENSG00000076554|P55327-5|TPD52;nc|ENSG00000076554|P55327-6|TPD52;nc|ENSG00000076554|P55327-7|TPD52;nc|ENSG00000076554|P55327|TPD52;TPD52|p.K164Sfs*5|1|0.09|ENSG00000076554|chr8:80051542-80051542|T/-|frameshift_variant	134.7655990226056	0.012935733000282069	6				NaN	NaN	0	NaN	5053	2928	7982
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7984	23.515	NaN	27012	30	0	3544.6	0.106	+			34502	RVFTGVVTK	9	94	503.80589678768837	1005.5972406421768	2	503.80572509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RVFTGVVTK_	CCAR1|p.E816Kfs*75|1|0.25|ENSG00000060339|chr10:68771347-68771347|A/-|frameshift_variant;CCAR1|p.Q181Kfs*2|1|0.31|ENSG00000060339|chr10:68747178-68747178|C/-|frameshift_variant;CCAR1|p.S739Vfs*11|1|0.47|ENSG00000060339|chr10:68765992-68765992|A/-|frameshift_variant;ENSG00000060339|ENST00000265872|CCAR1;nc|ENSG00000060339|Q8IX12-2|CCAR1	106.88024417677582	0.032181361622142884	6				NaN	NaN	0	NaN	5054	2928	7982
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7985	23.517	NaN	11405	30	0	1762.5	0.106			+	44912	TVAFERGAV	9	66	475.2585515663682	948.5025501995365	2	475.2584228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVAFERGAV_	REV__ENSG00000198113|ENST00000357503|TOR4A	39.252832667884924	0.4290233611298554	6				NaN	NaN	0	NaN	5055	2928	7982
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7986	23.519	NaN	48161	30	0	8988.6	0.106				-1	MMVVISLDRSL	11	72	427.22993863750963	1278.667986512729	3	427.2298278808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_M(Oxidation (M))MVVISLDRSL_	ENSG00000109163|ENST00000226413|GNRHR;GNRHR|p.F225Sfs*4|1|0.1|ENSG00000109163|chr4:67744636-67744636|A/-|frameshift_variant;GNRHR|p.H247Tfs*5|1|0.4|ENSG00000109163|chr4:67744571-67744571|G/-|frameshift_variant;nc|ENSG00000109163|P30968-2|GNRHR	32.75053402867276	0.6462648045997152	6				NaN	NaN	0	NaN	5056	2928	7982
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7987	23.52	NaN	5831	30	0	1363.9	0.106	+			17241	HVSTVNPNY	9	59	515.7512644612342	1029.4879759892683	2	515.7510986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HVSTVNPNY_	ENSG00000182742|ENST00000332503|HOXB4;ENSG00000198353|ENST00000430889|HOXC4	79.71258880314673	0.09879134589249085	6				NaN	NaN	0	NaN	5057	2928	7982
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7988	23.522	NaN	7720.8	30	0	3661.2	0.038			+	37206	SKGDFEKLQQ	10	54	393.87196398310004	1178.5940625495002	3	393.8717041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SKGDFEKLQQ_	REV__ENSG00000096384|ENST00000371646|HSP90AB1;REV__ENST00000505987.1_1_4:88814417-88815164:+|nuORF;REV__ENST00000517330.1_1_5:77337712-77337985:-|nuORF;REV__nc|ENSG00000183199|Q58FF7|HSP90AB3P;REV__nc|ENSG00000282100|Q58FF6|HSP90AB4P	36.446750945000026	0.5818864909973037	6				NaN	NaN	0	NaN	5058	2928	7982
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7989	23.523	NaN	9870.8	30	0	4070.2	0.142	+			41386	SVMKSFIKR	9	64	365.88303965950087	1094.6272895787026	3	365.88299560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVMKSFIKR_	ENSG00000149503|ENST00000394818|INCENP;ENST00000528375.1_1_11:61905314-61909007:+|nuORF;nc|ENSG00000149503|Q9NQS7-2|INCENP	51.19269402634007	0.2889735674168909	6				NaN	NaN	0	NaN	5059	2928	7982
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8006	23.561	NaN	25352	30	0	12736	0.214	+			25946	LSHTNILM	8	73	464.74948026089163	927.4844075885833	2	464.7493896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSHTNILM_	ENSG00000239732|ENST00000360658|TLR9;nc|ENSG00000239732|Q9NR96-2|TLR9;nc|ENSG00000239732|Q9NR96-3|TLR9;nc|ENSG00000239732|Q9NR96-4|TLR9;nc|ENSG00000239732|Q9NR96-5|TLR9;TLR9|p.G719Afs*37|1|0.18|ENSG00000239732|chr3:52222162-52222162|G/-|frameshift_variant	114.5858319719848	0.24229603992967627	6				NaN	NaN	0	NaN	5073	2931	8005
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8007	23.565	NaN	16965	30	0	1892.9	0.106	+			18515	ISKLSQLV	8	82	444.2816699134367	886.5487868936734	2	444.2813720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ISKLSQLV_	ENSG00000128510|ENST00000222482|CPA4;ENST00000470542.5_1_7:129933020-129945674:+|nuORF;ENST00000497388.5_1_7:129933020-129939280:+|nuORF;nc|ENSG00000128510|Q9UI42-2|CPA4	49.44154591367651	0.597725784090933	6				NaN	NaN	0	NaN	5074	2931	8005
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8008	23.567	NaN	6653.9	30	0	1040.5	0.106	+			20871	KIMSSPLSK	9	67	495.78632381198383	989.5580946907677	2	495.78594970703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KIMSSPLSK_	ENSG00000037241|ENST00000265100|RPL26L1;ENSG00000161970|ENST00000648839|RPL26;ENST00000578115.1_1_17:8285406-8285628:-|nuORF;ENST00000602923.1_1_11:2356544-2356979:-|nuORF	128.60217544463768	0.015992218256422188	6				NaN	NaN	0	NaN	5075	2931	8005
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8009	23.569	NaN	7998.7	30	0	1696.3	0.106	+			26435	LTGPPGVGK	9	66	413.2458259539927	824.4770989747855	2	413.2449645996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LTGPPGVGK_	ENSG00000135778|ENST00000366628|NTPCR	49.44154591367651	0.3095138337212152	6				NaN	NaN	0	NaN	5076	2931	8005
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8010	23.57	NaN	4731.7	30	0	796.19	0.106	+			27926	MVAPAVQEK	9	60	486.76242933062855	971.5103057280571	2	486.7628173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MVAPAVQEK_	ENSG00000173281|ENST00000310455|PPP1R3B	63.53385203322761	0.18415635464017938	6				NaN	NaN	0	NaN	5077	2931	8005
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8011	23.572	NaN	8623.2	30	0	3017.4	0.038				-1	 	0	60	390.5489138673391	1168.6249122022173	3	390.54864501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5078	2931	8005
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8012	23.573	NaN	2370.5	30	0	484.36	0.14	+			22127	KSPEIQRAL	9	61	521.3063752890718	1040.5981976449434	2	521.3063354492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KSPEIQRAL_	ENSG00000174444|ENST00000307961|RPL4;ENST00000422486.1_1_3:185135660-185136437:-|nuORF;ENST00000567229.5_1_15:66791747-66793486:-|nuORF	51.19269402634007	0.2889735674168909	6				NaN	NaN	0	NaN	5079	2931	8005
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8030	23.613	NaN	17593	30	0	11746	0.214	+			32472	QVMKTVLGK	9	76	502.3022662829551	1002.5899796327102	2	502.302001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QVMKTVLGK_	ENST00000562439.5_1_16:57238447-57238567:+|nuORF	82.7504851949679	0.08565546331141553	6				NaN	NaN	0	NaN	5094	2934	8029
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8031	23.617	NaN	16409	30	0	1271.7	0.106	+			40764	SVDKLVIQK	9	82	515.3188364862127	1028.6231200392253	2	515.3187866210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVDKLVIQK_	ENST00000523612.1_1_8:142469282-142469963:+|nuORF	126.24258497203832	0.01742065577488747	6				NaN	NaN	0	NaN	5095	2934	8029
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8032	23.619	NaN	4736.8	30	0	465.48	0.106	+			16121	HDVNLGRAV	9	63	490.7673484383116	979.5201439434232	2	490.7670593261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HDVNLGRAV_	ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1670Tfs*23|1|0.29|ENSG00000174231|chr17:1659487-1659487|C/-|frameshift_variant	93.19546047674547	0.05585629608842056	6				NaN	NaN	0	NaN	5096	2934	8029
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8033	23.621	NaN	8134.5	30	0	1045.6	0.106	+			42787	TEAHGLARL	9	74	484.26978690583996	966.52502087848	2	484.2695617675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TEAHGLARL_	ENSG00000123989|ENST00000243776|CHPF;nc|ENSG00000123989|Q8IZ52-4|CHPF	96.19043198914106	0.047412499214244314	6				NaN	NaN	0	NaN	5097	2934	8029
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8034	23.622	NaN	10844	30	0	1174.1	0.106	+			18140	ILKEHIQKSTG	11	82	418.57858600523383	1252.7139286159015	3	418.5784912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ILKEHIQKSTG_	CSTF2T|p.Q608H|1|0.16|ENSG00000177613|chr10:51697726-51697726|T/G|missense_variant	46.95498715874613	0.46277758983638906	6				NaN	NaN	0	NaN	5098	2934	8029
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8035	23.624	NaN	4010.4	30	0	1582.7	0.035	+			31968	QQVKGHYR	8	60	508.274609373833	1014.534665814466	2	508.2743835449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QQVKGHYR_	CENPB|p.E438Kfs*43|1|0.63|ENSG00000125817|chr20:3785172-3785172|C/-|frameshift_variant;ENSG00000125817|ENST00000379751|CENPB	42.47446043378293	0.6409579893742323	6				NaN	NaN	0	NaN	5099	2934	8029
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8053	23.659	NaN	22776	30	0	3350.1	0.214			+	9373	EKATIDNL	8	68	452.2427214277042	902.4708899222085	2	453.24700927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EKATIDNL_	REV__ENSG00000241837|ENST00000290299|ATP5PO;REV__ENST00000491703.5_1_21:35279611-35286837:-|nuORF;REV__ENST00000495005.5_1_21:35281377-35288052:-|nuORF	39.252832667884924	0.6609488554722044	6				NaN	NaN	0	NaN	5114	2937	8052
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8054	23.663	NaN	10147	30	0	1581.2	0.106	+			15978	HAIMRSPQM	9	73	535.765067917902	1069.515582902604	2	535.7658081054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HAIMRSPQM_	CTNNB1|p.L301Hfs*16|1|0.05|ENSG00000168036|chr3:41225827-41225831|TTCAA/-|frameshift_variant;CTNNB1|p.M271Wfs*5|1|0.08|ENSG00000168036|chr3:41225733-41225733|A/-|frameshift_variant;ENSG00000168036|ENST00000349496|CTNNB1	93.1432384553994	0.056003526918089595	6				NaN	NaN	0	NaN	5115	2937	8052
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8055	23.665	NaN	28972	30	0	15322	0.106	+			10521	EVYHTTVLK	9	74	545.3013694760432	1088.5881860188863	2	545.3020629882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EVYHTTVLK_	ENST00000396185.7_1_3:41241009-41266025:+|nuORF;ENST00000453024.5_1_3:41241021-41265725:+|nuORF	115.49404669440601	0.023927554121326553	6				NaN	NaN	0	NaN	5116	2937	8052
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8056	23.667	NaN	2666.2	30	0	396.56	0.106			+	45993	VATTLASNY	9	56	470.2427264849655	938.470900036731	2	470.24249267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VATTLASNY_	REV__ENSG00000130958|ENST00000253270|SLC35D2;REV__ENST00000490599.1_1_9:99083569-99086447:-|nuORF;REV__nc|ENSG00000130958|Q76EJ3-2|SLC35D2	47.91560031466742	0.327412564698279	6				NaN	NaN	0	NaN	5117	2937	8052
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8057	23.669	NaN	13755	30	0	4865.9	0.106	+			23904	LDKMITRN	8	79	495.7723171389066	989.5300813446132	2	497.2660827636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LDKMITRN_	ENSG00000137959|ENST00000370751|IFI44L;ENST00000486882.5_1_1:79093429-79094083:+|nuORF;nc|ENSG00000137959|Q53G44-2|IFI44L	30.503639358989545	0.7238069182250283	6				NaN	NaN	0	NaN	5118	2937	8052
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8058	23.671	NaN	8231.2	30	0	2103.5	0.033	+			39292	STASFSAVK	9	65	449.2378117091786	896.4610704851572	2	449.2371826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STASFSAVK_	ENSG00000012211|ENST00000599218|PRICKLE3;nc|ENSG00000012211|O43900-2|PRICKLE3	69.6276240434122	0.14239879520340665	6				NaN	NaN	0	NaN	5119	2937	8052
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8059	23.671	NaN	5281.3	30	0	1295.4	0.142	+			30508	QAFGVSAPKLA	11	50	363.54135503501294	1087.6022357052389	3	363.541259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QAFGVSAPKLA_	ENSG00000267221|ENST00000587304|C17orf113	36.31764250033197	0.6083289427130232	6				NaN	NaN	0	NaN	5120	2937	8052
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8077	23.71	NaN	378850	30	0	191640	0.139	+			32498	QVQAAQFAK	9	75	495.7723171389066	989.5300813446132	2	495.7725524902344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QVQAAQFAK_	ENSG00000135441|ENST00000548925|BLOC1S1;nc|ENSG00000135441|P78537-2|BLOC1S1	172.03106254824962	0.0024202251894594514	6				NaN	NaN	0	NaN	5135	2940	8076
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8078	23.713	NaN	98120	30	0	33585	0.106	+			18033	IINSSITTK	9	78	488.7875887624263	975.5606245916526	2	488.7874755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IINSSITTK_	CCT3|p.A379Lfs*9|1|0.21|ENSG00000163468|chr1:156312061-156312061|C/-|frameshift_variant;CCT3|p.K197Nfs*23|1|0.17|ENSG00000163468|chr1:156320857-156320857|T/-|frameshift_variant;CCT3|p.L350Ffs*9|1|0.49|ENSG00000163468|chr1:156312146-156312147|-/A|frameshift_variant;ENSG00000163468|ENST00000295688|CCT3;nc|ENSG00000163468|P49368-2|CCT3	166.0711670676379	0.003437550387609957	6				NaN	NaN	0	NaN	5136	2940	8076
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8079	23.715	NaN	26190	30	0	4411.7	0.106	+			16474	HETGTKITI	9	85	500.2775174567052	998.5404819802104	2	500.27728271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HETGTKITI_	ENSG00000073792|ENST00000382199|IGF2BP2;ENST00000496495.1_1_3:185393074-185393625:-|nuORF;ENST00000550858.1_1_12:42681476-42682067:+|nuORF;nc|ENSG00000073792|Q9Y6M1-1|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-3|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-4|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-5|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-6|IGF2BP2	148.98678547993487	0.0071052929883181565	6				NaN	NaN	0	NaN	5137	2940	8076
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8080	23.717	NaN	60984	30	0	40006	0.106	+			47974	VSPDAKTSL	9	75	459.25084813603934	916.4871433388787	2	459.25048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSPDAKTSL_	ENSG00000080200|ENST00000389622|CRYBG3	79.48907831485694	0.09975780661107167	6				NaN	NaN	0	NaN	5138	2940	8076
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8081	23.719	NaN	22041	30	0	3395.1	0.106	+			33685	RPAGLPEKY	9	81	515.7876397005557	1029.5607264679113	2	515.7880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RPAGLPEKY_	ENSG00000134339|ENST00000256733|SAA2;ENSG00000173432|ENST00000356524|SAA1	61.691277971877994	0.19951612995419254	6				NaN	NaN	0	NaN	5139	2940	8076
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8082	23.72	NaN	4071.2	30	0	486.59	0.106	+			38008	SPLKTTSSY	9	57	492.256279672289	982.498006411378	2	492.2562561035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SPLKTTSSY_	ENSG00000124429|ENST00000262753|POF1B;nc|ENSG00000124429|Q8WVV4-1|POF1B;nc|ENSG00000124429|Q8WVV4-3|POF1B;POF1B|p.T130Lfs*12|1|0.14|ENSG00000124429|chrX:85359600-85359601|-/AG|frameshift_variant	85.16082228582465	0.07850854922700509	6				NaN	NaN	0	NaN	5140	2940	8076
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8083	23.722	NaN	13701	30	0	8431.2	0.036	+			6487	AVYTKMMTK	9	55	358.18911578718576	1071.5455179617572	3	358.1893005371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AVYTKMMTK_	ENSG00000160211|ENST00000393562|G6PD;ENST00000490651.1_1_X:153760401-153761015:-|nuORF;nc|ENSG00000160211|P11413-2|G6PD;nc|ENSG00000160211|P11413-3|G6PD	37.81151784470057	0.4459294069877048	6				NaN	NaN	0	NaN	5141	2940	8076
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8101	23.756	NaN	73982	30	0	20421	0.214	+			39411	STDPSVLGK	9	101	452.2427214277042	902.4708899222085	2	452.24237060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STDPSVLGK_	ENSG00000114315|ENST00000232424|HES1;HES1|p.Y110C|1|0.27|ENSG00000114315|chr3:194137719-194137719|A/G|missense_variant	101.25262130126117	0.03792372629710479	6				NaN	NaN	0	NaN	5156	2943	8100
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8102	23.76	NaN	47707	30	0	9841.4	0.106			+	37454	SLILTLYNDM	10	99	394.87523356817815	1181.6038713047344	3	394.874755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLILTLYNDM_	REV__RICTOR|p.A393T|1|0.34|ENSG00000164327|chr5:38967202-38967202|C/T|missense_variant	43.650786325866115	0.5155049133366767	6				NaN	NaN	0	NaN	5157	2943	8100
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8103	23.762	NaN	7670.2	30	0	456.98	0.106	+			37934	SPEEGARVY	9	78	504.2434286697665	1006.472304406333	2	504.24310302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SPEEGARVY_	ENSG00000131037|ENST00000201647|EPS8L1;ENST00000587715.1_1_19:55598611-55598979:+|nuORF;ENST00000589362.5_1_19:55593317-55598979:+|nuORF;EPS8L1|p.A674V|1|0.11|ENSG00000131037|chr19:55087371-55087371|C/T|missense_variant;nc|ENSG00000131037|Q8TE68-2|EPS8L1;nc|ENSG00000131037|Q8TE68-4|EPS8L1	98.62937762414208	0.04060045538121712	6				NaN	NaN	0	NaN	5158	2943	8100
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8104	23.764	NaN	5104.2	30	0	1234.5	0.106				-1	STCNDLIAK	9	74	511.25285075185815	1020.4911485705163	2	511.2527770996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_STC(Carbamidomethyl (C))NDLIAK_	ENSG00000110048|ENST00000263847|OSBP;ENSG00000184792|ENST00000332585|OSBP2;ENST00000496367.1_1_22:31266465-31268361:+|nuORF;nc|ENSG00000184792|Q969R2-2|OSBP2;nc|ENSG00000184792|Q969R2-3|OSBP2;nc|ENSG00000184792|Q969R2-6|OSBP2;OSBP|p.I255Nfs*16|1|0.03|ENSG00000110048|chr11:59608542-59608543|-/AACATAAT|frameshift_variant	63.53385203322761	0.18415635464017938	6				NaN	NaN	0	NaN	5159	2943	8100
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8105	23.766	NaN	4000	30	0	826.97	0.106	+			20657	KGKQIVEY	8	66	482.7764135790898	963.5382742249797	2	482.7766418457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KGKQIVEY_	ENST00000403687.7_1_2:33701482-33701566:+|nuORF	68.484700416344	0.4195245774506064	6				NaN	NaN	0	NaN	5160	2943	8100
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8106	23.767	NaN	3349.6	30	0	478.24	0.033	+			23448	LADPSAKAV	9	49	436.2481596794556	870.4817664257113	2	436.2478332519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LADPSAKAV_	ENSG00000107854|ENST00000371627|TNKS2;ENSG00000173273|ENST00000310430|TNKS;nc|ENSG00000173273|O95271-2|TNKS;TNKS|p.N555Kfs*2|1|0.29|ENSG00000173273|chr8:9710033-9710034|-/A|frameshift_variant;TNKS2|p.K349Nfs*8|1|0.47|ENSG00000107854|chr10:91828344-91828344|A/-|frameshift_variant;TNKS2|p.M193*|1|0.31|ENSG00000107854|chr10:91819496-91819496|A/-|frameshift_variant;TNKS2|p.N622Tfs*29|1|0.33|ENSG00000107854|chr10:91842189-91842189|A/-|frameshift_variant	65.46538089061403	0.16805504838372562	6				NaN	NaN	0	NaN	5161	2943	8100
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8107	23.768	NaN	1628.4	30	0	164.46	0.14	+			1900	AINKCPLLK	9	70	528.8151459239486	1055.6157389146972	2	528.8154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_AINKC(Carbamidomethyl (C))PLLK_	ENSG00000149925|ENST00000642816|ALDOA;nc|ENSG00000149925|P04075|ALDOA	58.78195531508484	0.22376836668196862	6				NaN	NaN	0	NaN	5162	2943	8100
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8125	23.806	NaN	92851	30	0	29825	0.214			+	24747	LHSKESFAK	9	105	523.7851788859392	1045.5558048386783	2	523.7852783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LHSKESFAK_	REV__ENSG00000221994|ENST00000276054|ZNF630;REV__nc|ENSG00000221994|Q2M218-2|ZNF630	95.81516180277367	0.04847050768394289	6				NaN	NaN	0	NaN	5177	2946	8124
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8126	23.81	NaN	8471.2	30	0	976.44	0.106	+			39401	STDPAAPNLK	10	64	507.26671668939633	1012.5188804455927	2	507.2664489746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STDPAAPNLK_	ENSG00000137076|ENST00000314888|TLN1;nc|ENSG00000137076|Q9Y490-2|TLN1;TLN1|p.P1628Rfs*20|1|0.44|ENSG00000137076|chr9:35707144-35707144|G/-|frameshift_variant	98.58198989935565	0.0819402597096128	6				NaN	NaN	0	NaN	5178	2946	8124
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8127	23.812	NaN	9275.3	30	0	2609.7	0.106	+			2898	ASATALVSR	9	61	438.25237800658437	874.4902030799688	2	438.25067138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASATALVSR_	ENSG00000167491|ENST00000683918|GATAD2A;nc|ENSG00000167491|Q86YP4-2|GATAD2A;nc|ENSG00000167491|Q86YP4|GATAD2A	126.24258497203832	0.01742065577488747	6				NaN	NaN	0	NaN	5179	2946	8124
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8128	23.814	NaN	8256.7	30	0	2344.5	0.106	+			49512	VWNPRSHEKL	10	65	422.56331824723435	1264.668125341903	3	422.5630187988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VWNPRSHEKL_	ENSG00000178252|ENST00000608424|WDR6;ENST00000420783.7_1_3:49044839-49051550:+|nuORF;ENST00000471162.5_1_3:49044864-49051550:+|nuORF;WDR6|p.R808Afs*3|1|0.34|ENSG00000178252|chr3:49013948-49013949|-/G|frameshift_variant;WDR6|p.R808Gfs*33|2|0.31|ENSG00000178252|chr3:49013949-49013949|G/-|frameshift_variant	59.93077597824379	0.36646980200755325	6				NaN	NaN	0	NaN	5180	2946	8124
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8129	23.816	NaN	5204	30	0	574.63	0.106			+	13557	GLSSAGLPGK	10	66	443.7532453828521	885.4919378325043	2	443.7530517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GLSSAGLPGK_	REV__ENSG00000173320|ENST00000308497|STOX2;REV__nc|ENSG00000173320|Q9P2F5-2|STOX2	66.42927471994793	0.3073667423445326	6				NaN	NaN	0	NaN	5181	2946	8124
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8130	23.817	NaN	6978.7	30	0	906.13	0.034	+			2298	AMASPLPRE	9	72	486.25273434235527	970.4909157515106	2	486.2523498535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AMASPLPRE_	ENSG00000149115|ENST00000358252|TNKS1BP1;TNKS1BP1|p.K1000Rfs*133|1|0.41|ENSG00000149115|chr11:57309712-57309712|T/-|frameshift_variant;TNKS1BP1|p.S279Pfs*56|1|0.42|ENSG00000149115|chr11:57313854-57313854|G/-|frameshift_variant	47.657333605630114	0.33044192980041115	6				NaN	NaN	0	NaN	5182	2946	8124
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8131	23.818	NaN	2284.4	30	0	261.84	0.14	+			23627	LAQAQNFTL	9	59	503.2734691514033	1004.5323853696066	2	503.2733154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LAQAQNFTL_	ENSG00000099957|ENST00000413302|P2RX6;nc|ENSG00000099957|O15547-2|P2RX6	47.657333605630114	0.33044192980041115	6				NaN	NaN	0	NaN	5183	2946	8124
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8149	23.856	NaN	35918	30	0	4856.6	0.214	+			15926	HADGTIVRY	9	87	516.2671428642823	1030.5197327953645	2	516.2672119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HADGTIVRY_	ENSG00000138002|ENST00000260570|IFT172;ENST00000476264.6_1_2:27703990-27712589:-|nuORF;ENST00000507184.5_1_2:27680991-27709067:-|nuORF;ENST00000511842.5_1_2:27693746-27712529:-|nuORF;IFT172|p.G252Afs*6|1|0.19|ENSG00000138002|chr2:27481076-27481076|C/-|frameshift_variant;IFT172|p.W628Qfs*6|1|0.03|ENSG00000138002|chr2:27465466-27465467|-/CATTG|frameshift_variant;nc|ENSG00000138002|Q9UG01-2|IFT172;nc|ENSG00000138002|Q9UG01-3|IFT172	136.26810882979174	0.012230845423532208	6				NaN	NaN	0	NaN	5198	2949	8148
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8150	23.86	NaN	14152	30	0	1769.6	0.106			+	33213	RFGTGAASLLQ	11	77	560.8084523421486	1119.602351751097	2	560.8095092773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RFGTGAASLLQ_	REV__KANSL1|p.K437Nfs*43|1|0.37|ENSG00000120071|chr17:46094680-46094680|T/-|frameshift_variant	84.81729255234993	0.11999117121320589	6				NaN	NaN	0	NaN	5199	2949	8148
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8151	23.862	NaN	6232.6	30	0	1019.6	0.106			+	5239	ATVAKAVEE	9	65	459.25084813603934	916.4871433388787	2	459.75653076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATVAKAVEE_	REV__ENST00000471997.1_1_2:147345807-147346347:+|nuORF	60.97194046774394	0.20551255781574032	6				NaN	NaN	0	NaN	5200	2949	8148
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8152	23.864	NaN	12726	30	0	3115.1	0.106	+			32101	QSGLPQPV	8	56	413.2269162854835	824.4392796377671	2	413.2266845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QSGLPQPV_	CON__ENSEMBL:ENSBTAP00000001528;ENSG00000205726|ENST00000381318|ITSN1;ITSN1|p.L158Hfs*3|1|0.06|ENSG00000205726|chr21:33750268-33750269|-/A|frameshift_variant;ITSN1|p.L158Pfs*3|1|0.4|ENSG00000205726|chr21:33750261-33750262|-/C|frameshift_variant;ITSN1|p.P1076Tfs*2|1|0.25|ENSG00000205726|chr21:33826852-33826853|-/A|frameshift_variant;nc|ENSG00000205726|Q15811-10|ITSN1;nc|ENSG00000205726|Q15811-11|ITSN1;nc|ENSG00000205726|Q15811-12|ITSN1;nc|ENSG00000205726|Q15811-13|ITSN1;nc|ENSG00000205726|Q15811-2|ITSN1;nc|ENSG00000205726|Q15811-3|ITSN1;nc|ENSG00000205726|Q15811-4|ITSN1;nc|ENSG00000205726|Q15811-5|ITSN1;nc|ENSG00000205726|Q15811-6|ITSN1;nc|ENSG00000205726|Q15811-7|ITSN1;nc|ENSG00000205726|Q15811-8|ITSN1;nc|ENSG00000205726|Q15811-9|ITSN1	47.91560031466742	0.6071945918984287	6				NaN	NaN	0	NaN	5201	2949	8148
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8153	23.866	NaN	6041	30	0	1057.3	0.106	+			37948	SPEPGQRTF	9	82	509.75129108927865	1017.4880292453573	2	509.75115966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SPEPGQRTF_	ENSG00000156273|ENST00000286800|BACH1	70.8162118820467	0.13725933411854815	6				NaN	NaN	0	NaN	5202	2949	8148
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8154	23.867	NaN	3817.5	30	0	642.87	0.032	+			36387	SETKGVAL	8	62	402.7269396653921	803.4393263975842	2	402.7266845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SETKGVAL_	ENSG00000206075|ENST00000382771|SERPINB5	47.91560031466742	0.6071945918984287	6				NaN	NaN	0	NaN	5203	2949	8148
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8155	23.868	NaN	5746.5	30	0	850.37	0.14	+			13791	GQHTVLLVK	9	69	497.8061773777778	993.5978018223556	2	497.805908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GQHTVLLVK_	ENSG00000180198|ENST00000683442|RCC1;nc|ENSG00000180198|P18754-2|RCC1	72.2432373244024	0.13108886737667413	6				NaN	NaN	0	NaN	5204	2949	8148
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8173	23.907	NaN	9969.6	30	0	1914.4	0.214			+	9634	ELRLEARL	8	78	500.30107467413137	998.5875964150628	2	500.30078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ELRLEARL_	REV__ENSG00000103657|ENST00000443617|HERC1;REV__HERC1|p.C2300Hfs*14|1|0.44|ENSG00000103657|chr15:63678017-63678018|AA/-|frameshift_variant;REV__HERC1|p.L3887Pfs*44|1|0.06|ENSG00000103657|chr15:63640394-63640395|-/ATGAATGG|frameshift_variant;REV__HERC1|p.M2237*|1|0.39|ENSG00000103657|chr15:63678206-63678206|T/-|frameshift_variant;REV__HERC1|p.V1879Lfs*26|1|0.37|ENSG00000103657|chr15:63694004-63694004|T/-|frameshift_variant	45.97224482568171	0.6192535143389125	6				NaN	NaN	0	NaN	5219	2952	8172
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8174	23.911	NaN	15035	30	0	5419.7	0.106	+			15402	GTYGLDSVKK	10	44	356.5292561343095	1066.5659390031285	3	356.5291442871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTYGLDSVKK_	ENSG00000087338|ENST00000282570|GMCL1	49.44154591367651	0.46214596422418036	6				NaN	NaN	0	NaN	5220	2952	8172
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8175	23.913	NaN	7781.9	30	0	3774.9	0.106	+			8917	EEVKDRCTL	9	72	546.771542320797	1091.528531708394	2	546.7717895507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EEVKDRCTL_	ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65622809-65623088:-|nuORF	41.42661286455405	0.403525789677298	6				NaN	NaN	0	NaN	5221	2952	8172
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8176	23.915	NaN	17637	30	0	5571.1	0.106	+			50544	YARSVHEEF	9	62	379.84910738033574	1136.5254927412072	3	379.8488464355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YARSVHEEF_	ENSG00000078808|ENST00000360001|SDF4;ENST00000465727.5_1_1:1152894-1153089:-|nuORF;ENST00000478938.1_1_1:1152894-1154464:-|nuORF;ENST00000494748.1_1_1:1152894-1154464:-|nuORF;nc|ENSG00000078808|Q9BRK5-2|SDF4;nc|ENSG00000078808|Q9BRK5-5|SDF4;nc|ENSG00000078808|Q9BRK5|SDF4	66.42927471994793	0.16001998865088202	6				NaN	NaN	0	NaN	5222	2952	8172
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8177	23.917	NaN	11866	30	0	3842.6	0.106	+			50545	YARSVHEEF	9	65	569.2698407958884	1136.5251286585767	2	569.27001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YARSVHEEF_	ENSG00000078808|ENST00000360001|SDF4;ENST00000465727.5_1_1:1152894-1153089:-|nuORF;ENST00000478938.1_1_1:1152894-1154464:-|nuORF;ENST00000494748.1_1_1:1152894-1154464:-|nuORF;nc|ENSG00000078808|Q9BRK5-2|SDF4;nc|ENSG00000078808|Q9BRK5-5|SDF4;nc|ENSG00000078808|Q9BRK5|SDF4	125.71293069911285	0.017741295328254008	6				NaN	NaN	0	NaN	5223	2952	8172
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8178	23.919	NaN	11166	30	0	4044.9	0.034	+			30967	QEQAAKAVL	9	65	479.2715897125444	NaN	0	479.2716369628906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QEQAAKAVL_	ENSG00000130119|ENST00000360845|GNL3L	110.11987700582712	0.00958887139988123	6				NaN	NaN	0	NaN	5224	2952	8172
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8179	23.919	NaN	3314.8	30	0	315.28	0.141	+			14741	GTKEDVDVLK	10	74	552.3005881614662	1102.5866233897323	2	552.3010864257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GTKEDVDVLK_	ENSG00000022277|ENST00000357348|RTF2	92.23892857375223	0.11825556496531454	6				NaN	NaN	0	NaN	5225	2952	8172
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8197	23.957	NaN	55500	30	0	8683.6	0.214	+			33449	RILSGVVTK	9	105	486.8136899407878	971.6128269483756	2	486.81353759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RILSGVVTK_	ENSG00000142534|ENST00000270625|RPS11	109.43880257439609	0.029570636687953285	6				NaN	NaN	0	NaN	5240	2955	8196
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8198	23.961	NaN	30016	30	0	5426	0.106			+	47663	VSDFGPPPS	9	97	451.7163552768491	901.4181576204982	2	451.7161560058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSDFGPPPS_	REV__ENSG00000041880|ENST00000398755|PARP3;REV__ENST00000486510.1_1_3:51981724-51982493:+|nuORF;REV__nc|ENSG00000041880|Q9Y6F1-2|PARP3	66.42927471994793	0.16001998865088202	6				NaN	NaN	0	NaN	5241	2955	8196
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8199	23.963	NaN	27432	30	0	8616	0.106	+			8319	EAKGTVAL	8	75	394.72947391258003	787.4443948919601	2	394.729248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EAKGTVAL_	ENSG00000205502|ENST00000380392|C2CD4B	69.6276240434122	0.4100012001731381	6				NaN	NaN	0	NaN	5242	2955	8196
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8200	23.965	NaN	9402.1	30	0	1736.6	0.106	+			24130	LEKTGVAV	8	66	408.74509104759403	815.4756291619881	2	408.744873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LEKTGVAV_	ENSG00000196924|ENST00000369850|FLNA;FLNA|p.A1026Lfs*20|1|0.42|ENSG00000196924|chrX:154361439-154361439|C/-|frameshift_variant;FLNA|p.G2237Efs*109|1|0.28|ENSG00000196924|chrX:154352240-154352240|C/-|frameshift_variant;FLNA|p.Q1716Sfs*23|2|0.38|ENSG00000196924|chrX:154354896-154354896|G/-|frameshift_variant;FLNA|p.R2520Vfs*16|1|0.7|ENSG00000196924|chrX:154349560-154349560|G/-|frameshift_variant;nc|ENSG00000196924|P21333-2|FLNA	104.74654710444128	0.24806011021879068	6				NaN	NaN	0	NaN	5243	2955	8196
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8201	23.967	NaN	9117.3	30	0	874.69	0.106	+			34895	SAAASGGLLK	10	60	437.7531562053307	NaN	0	437.753173828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SAAASGGLLK_	ENSG00000175073|ENST00000310421|VCPIP1;VCPIP1|p.A460Qfs*2|1|0.36|ENSG00000175073|chr8:66665582-66665582|T/-|frameshift_variant;VCPIP1|p.K1108Nfs*37|1|0.15|ENSG00000175073|chr8:66634846-66634846|T/-|frameshift_variant	82.7504851949679	0.08592666434486707	6				NaN	NaN	0	NaN	5244	2955	8196
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8202	23.968	NaN	20464	30	0	5810.7	0.038	+			43964	TPEEKIREY	9	72	388.8682476681056	1163.5829136045168	3	388.8680725097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TPEEKIREY_	ENSG00000138668|ENST00000313899|HNRNPD;ENST00000514325.1_1_4:83279715-83279970:-|nuORF;nc|ENSG00000138668|Q14103-2|HNRNPD;nc|ENSG00000138668|Q14103-3|HNRNPD;nc|ENSG00000138668|Q14103-4|HNRNPD	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	5245	2955	8196
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8203	23.969	NaN	7009.5	30	0	1466.8	0.139	+			5276	ATVETTIAR	9	63	481.26938214433335	960.5242113554667	2	481.26922607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATVETTIAR_	ENSG00000064042|ENST00000503057|LIMCH1;LIMCH1|p.K805Rfs*20|1|0.37|ENSG00000064042|chr4:41680049-41680049|A/-|frameshift_variant;LIMCH1|p.T960Pfs*48|1|0.18|ENSG00000064042|chr4:41685768-41685768|A/-|frameshift_variant;nc|ENSG00000064042|Q9UPQ0-10|LIMCH1;nc|ENSG00000064042|Q9UPQ0-2|LIMCH1;nc|ENSG00000064042|Q9UPQ0-3|LIMCH1;nc|ENSG00000064042|Q9UPQ0-4|LIMCH1;nc|ENSG00000064042|Q9UPQ0-5|LIMCH1;nc|ENSG00000064042|Q9UPQ0-6|LIMCH1;nc|ENSG00000064042|Q9UPQ0-8|LIMCH1;nc|ENSG00000064042|Q9UPQ0-9|LIMCH1;nc|ENSG00000064042|Q9UPQ0|LIMCH1	145.15565482312357	0.00806134135205793	6				NaN	NaN	0	NaN	5246	2955	8196
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8221	24.006	NaN	183360	30	0	64418	0.152			+	34743	RWVRSFGPLGW	11	88	454.2459101247237	1359.7159009743712	3	454.2452087402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RWVRSFGPLGW_	REV__ENST00000564747.1_1_16:27473425-27473950:-|nuORF	37.81151784470057	0.5878881669006212	6				NaN	NaN	0	NaN	5261	2958	8220
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8222	24.009	NaN	34021	30	0	5592.8	0.106	+			4429	ATIEETYSK	9	80	521.258472412029	1040.502391890858	2	521.2586059570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATIEETYSK_	ENSG00000130475|ENST00000596536|FCHO1;ENST00000601247.5_1_19:17858586-17877404:+|nuORF;FCHO1|p.A50V|1|0.36|ENSG00000130475|chr19:17764404-17764404|C/T|missense_variant;nc|ENSG00000130475|O14526-2|FCHO1	155.5846463517096	0.005567437401040498	6				NaN	NaN	0	NaN	5262	2958	8220
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8223	24.011	NaN	5958.5	30	0	434.32	0.106	+			19680	KDPKQIIR	8	74	499.3109106867214	996.6072684402428	2	499.31109619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KDPKQIIR_	ENSG00000084463|ENST00000261167|WBP11;ENST00000544764.5_1_12:14952512-14954317:-|nuORF	77.31757898189308	0.345924878368729	6				NaN	NaN	0	NaN	5263	2958	8220
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8224	24.012	NaN	9898.7	30	0	2430.3	0.106			+	39085	SSSSVAKLV	9	63	439.2531083524738	876.4916637717477	2	439.2527770996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSSSVAKLV_	REV__TAGAP|p.F460V|1|0.23|ENSG00000164691|chr6:159036645-159036645|A/C|missense_variant	66.42927471994793	0.16001998865088202	6				NaN	NaN	0	NaN	5264	2958	8220
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8225	24.014	NaN	1373.4	30	0	825.05	0.106	+			37249	SKVTKTDVL	9	29	330.86583807131217	989.5756848141366	3	330.86572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SKVTKTDVL_	ENST00000586818.1_1_19:28294655-28294964:+|nuORF	17.364965105453717	0.6112419832031293	6				NaN	NaN	0	NaN	5265	2958	8220
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8226	24.016	NaN	5465.2	30	0	939.09	0.106			+	11718	FSASLGRG	8	64	397.71159254289137	793.4086321525828	2	397.7113037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FSASLGRG_	REV__ENST00000294964.5_1_2:42285284-42285593:+|nuORF	40.5726180659479	0.6527593143185008	6				NaN	NaN	0	NaN	5266	2958	8220
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8227	24.018	NaN	2742.2	30	0	373.43	0.036	+			33930	RSADLTGLEK	10	57	545.2986511361352	1088.5827493390702	2	545.298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RSADLTGLEK_	ENSG00000196878|ENST00000356082|LAMB3	83.6470233535746	0.16744595502813267	6				NaN	NaN	0	NaN	5267	2958	8220
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8245	24.055	NaN	7177.4	30	0	1791.1	0.214	+			7924	DSGLAAYVAK	10	61	497.7641854802928	993.5138180273856	2	497.7635192871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DSGLAAYVAK_	ENSG00000101323|ENST00000378789|HAO1	74.25504064058377	0.24255678544297835	6				NaN	NaN	0	NaN	5282	2961	8244
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8246	24.059	NaN	3747.7	30	0	1036.5	0.106	+			34797	RYLEKNVKL	9	66	581.8507537071968	1161.6869544811934	2	581.8507080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RYLEKNVKL_	ENSG00000137574|ENST00000260129|TGS1;ENST00000523948.5_1_8:56686169-56737149:+|nuORF;TGS1|p.G559Rfs*2|1|0.17|ENSG00000137574|chr8:55799039-55799040|-/A|frameshift_variant	75.65223720490533	0.11634833104049533	6				NaN	NaN	0	NaN	5283	2961	8244
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8247	24.061	NaN	6857.7	30	0	788.62	0.106			+	27416	MKYGMSIHRL	10	76	412.55053061064274	1234.6297624321282	3	412.5506591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MKYGMSIHRL_	REV__ENSG00000184205|ENST00000375442|TSPYL2;REV__ENST00000553557.5_1_X:53113753-53114504:+|nuORF;REV__ENST00000556808.1_1_X:53112313-53114116:+|nuORF	58.2462437865262	0.38179041844353556	6				NaN	NaN	0	NaN	5284	2961	8244
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8248	24.063	NaN	6405	30	0	481.23	0.106	+			34417	RTTFLHISK	9	66	368.21705719887666	1101.62934219683	3	368.2169189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RTTFLHISK_	ENSG00000169692|ENST00000371696|AGPAT2;ENST00000472820.1_1_9:139568206-139571631:-|nuORF;nc|ENSG00000169692|O15120-2|AGPAT2	63.42647028704847	0.1850514934184437	6				NaN	NaN	0	NaN	5285	2961	8244
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8249	24.065	NaN	4875.6	30	0	584.28	0.106	+			22926	KVQDSVLIK	9	65	515.3187068817898	1028.6228608303795	2	515.3187255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KVQDSVLIK_	ENSG00000107290|ENST00000224140|SETX;nc|ENSG00000107290|Q7Z333-3|SETX;nc|ENSG00000107290|Q7Z333-4|SETX;SETX|p.F1748Sfs*3|1|0.55|ENSG00000107290|chr9:132326355-132326355|A/-|frameshift_variant;SETX|p.G1134Efs*24|1|0.34|ENSG00000107290|chr9:132328199-132328199|T/-|frameshift_variant;SETX|p.G1252Dfs*9|2|0.2|ENSG00000107290|chr9:132327843-132327843|C/-|frameshift_variant;SETX|p.I2020Nfs*4|1|0.32|ENSG00000107290|chr9:132295919-132295920|-/T|frameshift_variant;SETX|p.N1361Ifs*53|1|0.11|ENSG00000107290|chr9:132327516-132327516|T/-|frameshift_variant;SETX|p.S1600*|1|0.07|ENSG00000107290|chr9:132326800-132326801|-/A|frameshift_variant;SETX|p.T2478Sfs*35|1|0.35|ENSG00000107290|chr9:132264836-132264840|TATGG/-|frameshift_variant	81.52500206392136	0.09095445986635249	6				NaN	NaN	0	NaN	5286	2961	8244
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8250	24.067	NaN	7494.4	30	0	1468.5	0.032	+			44926	TVAHNSAL	8	48	406.7166412676464	NaN	0	406.7165222167969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TVAHNSAL_	ZNF658|p.F695V|1|0.07|ENSG00000274349|chr9:66919649-66919649|T/G|missense_variant	55.50420428727701	1.7418937515398478	6				NaN	NaN	0	NaN	5287	2961	8244
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8251	24.067	NaN	2913.4	30	0	312.11	0.139	+			23890	LDITAPNKN	9	64	493.2694066113433	984.5242602894866	2	493.26898193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LDITAPNKN_	tr|U7SGJ5|U7SGJ5_FUSNUFilamentoushaemagglutininFhaB/tRNAnucleaseCdiA-likeTPSdomain-containingprotein(Fragment)OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02209PE=4SV=1	47.95952297671804	0.32689736945648856	6				NaN	NaN	0	NaN	5288	2961	8244
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8269	24.107	NaN	13009	30	0	4611.7	0.214	+			31110	QFSGKITVK	9	72	504.2977846949006	1006.5810164566012	2	504.2977294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QFSGKITVK_	ENSG00000075568|ENST00000186436|TMEM131;TMEM131|p.G555Wfs*10|1|0.32|ENSG00000075568|chr2:97812704-97812705|-/A|frameshift_variant;TMEM131|p.L1469Tfs*5|1|0.43|ENSG00000075568|chr2:97772340-97772341|-/T|frameshift_variant;TMEM131|p.L538Ffs*27|1|0.09|ENSG00000075568|chr2:97813974-97813975|-/A|frameshift_variant;TMEM131|p.N815Ifs*2|1|0.27|ENSG00000075568|chr2:97802749-97802749|T/-|frameshift_variant;TMEM131|p.N815Kfs*9|1|0.31|ENSG00000075568|chr2:97802748-97802749|-/T|frameshift_variant	141.52041321563706	0.009766778904176347	6				NaN	NaN	0	NaN	5303	2964	8268
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8270	24.11	NaN	3610.5	30	0	588.8	0.106			+	40756	SVDKENLK	8	52	466.7556870129826	NaN	0	466.7557067871094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVDKENLK_	REV__tr|U7SKJ4|U7SKJ4_FUSNUUncharacterizedprotein(Fragment)OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02177PE=4SV=1	49.44154591367651	1.7418937515398478	6				NaN	NaN	0	NaN	5304	2964	8268
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8271	24.112	NaN	3489.8	30	0	326.54	0.106			+	29758	PHSQVSSI	8	57	427.7219253852564	853.4292978373128	2	427.7217712402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PHSQVSSI_	REV__ENSG00000083168|ENST00000265713|KAT6A;REV__KAT6A|p.P1694Tfs*13|1|0.25|ENSG00000083168|chr8:41933141-41933142|-/G|frameshift_variant	68.78682469695295	0.41700713582915416	6				NaN	NaN	0	NaN	5305	2964	8268
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8272	24.114	NaN	8617.4	30	0	1927.5	0.106			+	47966	VSNFINGK	8	61	439.7401451845914	877.4657374359829	2	439.7398376464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSNFINGK_	REV__AXDND1|p.N583Vfs*2|1|0.1|ENSG00000162779|chr1:179445152-179445153|-/GTCT|frameshift_variant;REV__ENSG00000162779|ENST00000367618|AXDND1;REV__ENST00000461179.2_1_1:179339175-179437601:+|nuORF;REV__nc|ENSG00000162779|Q5T1B0-2|AXDND1	66.42927471994793	0.4381325844043345	6				NaN	NaN	0	NaN	5306	2964	8268
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8273	24.116	NaN	22703	30	0	6670	0.106	+			45221	TVNTSLVGK	9	72	459.76700266333745	917.5194523934749	2	459.7660217285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TVNTSLVGK_	CCDC66|p.A265Sfs*9|1|0.15|ENSG00000180376|chr3:56567024-56567025|-/A|frameshift_variant;CCDC66|p.T207Nfs*2|2|0.31|ENSG00000180376|chr3:56566661-56566662|-/A|frameshift_variant;CCDC66|p.V732*|1|0.25|ENSG00000180376|chr3:56617454-56617454|A/-|frameshift_variant;ENSG00000180376|ENST00000394672|CCDC66;ENST00000422788.5_1_3:56595403-56599181:+|nuORF;ENST00000469966.1_1_3:56592935-56598176:+|nuORF;ENST00000472582.5_1_3:56591255-56599181:+|nuORF;nc|ENSG00000180376|A2RUB6-2|CCDC66;nc|ENSG00000180376|A2RUB6-3|CCDC66;nc|ENSG00000180376|A2RUB6-4|CCDC66	92.23892857375223	0.05855307001735979	6				NaN	NaN	0	NaN	5307	2964	8268
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8274	24.118	NaN	1833.2	30	0	137.65	0.035			+	-1	TDMGAMCSE	9	57	509.1699198878879	1016.3252868425758	2	509.169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),Oxidation (M)	_TDM(Oxidation (M))GAMC(Carbamidomethyl (C))SE_	REV__ENSG00000109132|ENST00000226382|PHOX2B	17.364965105453717	0.6112419832031293	6				NaN	NaN	0	NaN	5308	2964	8268
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8275	24.118	NaN	1270.6	30	0	168.89	0.141			+	18992	IVTLNWSYA	9	49	533.7810943212752	NaN	0	533.78076171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IVTLNWSYA_	REV__ENSG00000196652|ENST00000326775|ZKSCAN5	40.77816245573522	0.2702456086868081	6				NaN	NaN	0	NaN	5309	2964	8268
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8293	24.158	NaN	196940	30	0	43607	0.156	+			36859	SIFKQPVTK	9	99	524.3133758038082	1046.6121986744163	2	524.313720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIFKQPVTK_	ENSG00000071655|ENST00000434436|MBD3;ENSG00000134046|ENST00000256429|MBD2;ENST00000590830.5_1_19:1578341-1584901:-|nuORF;nc|ENSG00000071655|O95983-2|MBD3	195.57289506066198	5.204600901213804E-05	6				NaN	NaN	0	NaN	5324	2967	8292
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8294	24.16	NaN	26164	30	0	3317	0.106			+	11289	FKGAISPK	8	85	424.2554339257015	846.496314918203	2	424.2552795410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FKGAISPK_	REV__ENSG00000166948|ENST00000202625|TGM6;REV__nc|ENSG00000166948|O95932-2|TGM6	115.45897859103373	0.24104770225811847	6				NaN	NaN	0	NaN	5325	2967	8292
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8295	24.162	NaN	9483	30	0	1718.1	0.106	+			43168	TETHVERVL	9	70	542.2935734582265	1082.572593983253	2	542.2939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TETHVERVL_	ENSG00000076201|ENST00000265562|PTPN23;PTPN23|p.L1513Wfs*71|1|0.44|ENSG00000076201|chr3:47412805-47412805|G/-|frameshift_variant	72.87924865735499	0.12833875048249987	6				NaN	NaN	0	NaN	5326	2967	8292
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8296	24.164	NaN	7360.7	30	0	1544.9	0.106	+			20417	KETPDKVEL	9	66	529.790446949632	1057.566340966064	2	529.7919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KETPDKVEL_	ENSG00000136045|ENST00000412830|PWP1;nc|ENSG00000136045|Q13610-2|PWP1;PWP1|p.R140Lfs*5|1|0.31|ENSG00000136045|chr12:107693013-107693013|G/-|frameshift_variant	76.16968421966216	0.11411088698345859	6				NaN	NaN	0	NaN	5327	2967	8292
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8297	24.166	NaN	4955.9	30	0	1402.7	0.106	+			26456	LTHRPNISI	9	46	350.8733404021632	1049.5981918066896	3	350.8733215332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LTHRPNISI_	ENSG00000105492|ENST00000425629|SIGLEC6;ENST00000489837.1_1_19:52032900-52035046:-|nuORF;ENST00000496422.5_1_19:52032900-52035046:-|nuORF;nc|ENSG00000105492|O43699-2|SIGLEC6;nc|ENSG00000105492|O43699-3|SIGLEC6;nc|ENSG00000105492|O43699-5|SIGLEC6;nc|ENSG00000105492|O43699-6|SIGLEC6	25.57405402267927	0.5642445186134241	6				NaN	NaN	0	NaN	5328	2967	8292
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8298	24.168	NaN	5190.3	30	0	861.67	0.106	+			45199	TVNPKESILK	10	76	564.8345908161748	1127.6546286991495	2	564.8349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TVNPKESILK_	ENSG00000139687|ENST00000267163|RB1;RB1|p.L561Mfs*9|1|0.07|ENSG00000139687|chr13:48381428-48381432|CCTTG/-|frameshift_variant;RB1|p.V654Cfs*4|1|0.33|ENSG00000139687|chr13:48456343-48456343|A/-|frameshift_variant;RB1|p.Y529*|1|0.23|ENSG00000139687|chr13:48381334-48381335|AC/-|frameshift_variant;RB1|p.Y529Tfs*3|1|0.08|ENSG00000139687|chr13:48381329-48381329|T/-|frameshift_variant	99.01295224348159	0.08062808246117298	6				NaN	NaN	0	NaN	5329	2967	8292
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8299	24.17	NaN	2004.4	30	0	108.21	0.035	+			5758	AVGKTSFLR	9	64	489.7901914807105	977.5658300282211	2	489.7901916503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AVGKTSFLR_	ENSG00000130038|ENST00000440314|CRACR2A	40.05817265558897	0.419577045485086	6				NaN	NaN	0	NaN	5330	2967	8292
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8317	24.206	NaN	6849.9	30	0	1876.4	0.214	+			26499	LTMKVAVNK	9	73	502.30210790975883	1002.5896628863177	2	502.3018493652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LTMKVAVNK_	ENST00000418474.1_1_2:160472985-160473165:+|nuORF	82.7504851949679	0.08565546331141553	6				NaN	NaN	0	NaN	5345	2970	8316
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8318	24.21	NaN	8623.6	30	0	1850.3	0.106			+	-1	LCRPGTLA	8	74	444.2418241808884	886.4690954285768	2	444.2416076660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LC(Carbamidomethyl (C))RPGTLA_	REV__ENST00000489671.5_2_3:141668120-141668426:-|nuORF	73.97473282117947	0.3737790450121076	6				NaN	NaN	0	NaN	5346	2970	8316
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8319	24.212	NaN	7873.8	30	0	568.68	0.106	+			8297	EAIQRTEAY	9	65	540.7696172768913	1079.5246816205824	2	540.7701416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EAIQRTEAY_	ENSG00000148396|ENST00000684901|SEC16A;nc|ENSG00000148396|O15027-2|SEC16A;nc|ENSG00000148396|O15027-3|SEC16A;nc|ENSG00000148396|O15027-4|SEC16A;nc|ENSG00000148396|O15027-5|SEC16A;SEC16A|p.P2155Hfs*25|1|0.25|ENSG00000148396|chr9:136447664-136447664|G/-|frameshift_variant	162.25246889848123	0.0040893836092247005	6				NaN	NaN	0	NaN	5347	2970	8316
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8320	24.214	NaN	4787.3	30	0	970.82	0.106	+			26500	LTMKVAVNK	9	45	335.20366491087987	1002.5891653328397	3	335.20379638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LTMKVAVNK_	ENST00000418474.1_1_2:160472985-160473165:+|nuORF	27.882242232435846	0.5426732730940306	6				NaN	NaN	0	NaN	5348	2970	8316
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8321	24.215	NaN	4045.4	30	0	497.88	0.106	+			26306	LSVLQVSR	8	65	451.27672404980166	NaN	0	451.27667236328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSVLQVSR_	ENST00000253699.7_1_3:15138164-15139629:-|nuORF	60.97194046774394	1.7418937515398478	6				NaN	NaN	0	NaN	5349	2970	8316
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8322	24.217	NaN	2642.2	30	0	412.98	0.034	+			6370	AVTVAPPGAR	10	52	469.77438034260405	937.5342077520081	2	469.7742614746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AVTVAPPGAR_	ENSG00000153187|ENST00000640218|HNRNPU;ENST00000476241.2_2_1:245025757-245027609:-|nuORF;nc|ENSG00000153187|Q00839-2|HNRNPU	47.657333605630114	0.47858658696240314	6				NaN	NaN	0	NaN	5350	2970	8316
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8323	24.218	NaN	24526	30	0	15032	0.138	+			14641	GTGTIIVAK	9	65	430.2661143114081	858.5176756896162	2	430.2655944824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GTGTIIVAK_	ENSG00000083857|ENST00000441802|FAT1;FAT1|p.G2934Vfs*3|2|0.37|ENSG00000083857|chr4:186617787-186617787|T/-|frameshift_variant;FAT1|p.N3847Yfs*7|1|0.03|ENSG00000083857|chr4:186601370-186601371|-/TTATA|frameshift_variant;FAT1|p.P3228Lfs*42|1|0.27|ENSG00000083857|chr4:186611556-186611556|G/-|frameshift_variant;FAT1|p.P4313Lfs*36|1|0.34|ENSG00000083857|chr4:186596602-186596602|G/-|frameshift_variant;FAT1|p.Q2933Hfs*14|1|0.33|ENSG00000083857|chr4:186617787-186617788|-/G|frameshift_variant;FAT1|p.V1878Cfs*8|2|0.22|ENSG00000083857|chr4:186620955-186620956|-/G|frameshift_variant	90.36981228632155	0.0638227155548745	6				NaN	NaN	0	NaN	5351	2970	8316
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8341	24.256	NaN	528970	30	0	130570	0.145	+			10675	EYSKQMQRF	9	88	406.1974595810417	1215.5705493433252	3	406.19744873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EYSKQMQRF_	ENSG00000116478|ENST00000373548|HDAC1;ENSG00000196591|ENST00000519065|HDAC2;ENST00000463172.5_1_1:32757770-32792715:+|nuORF;ENST00000481281.5_1_1:32757770-32793222:+|nuORF;nc|ENSG00000196591|Q92769-3|HDAC2	42.396135135203025	0.392153681582562	6				NaN	NaN	0	NaN	5366	2973	8340
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8342	24.259	NaN	63747	30	0	23099	0.106	+			46918	VIVDSTVGK	9	82	459.2684411125474	NaN	0	459.2684631347656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VIVDSTVGK_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	80.45461616416974	0.0698259577396595	6				NaN	NaN	0	NaN	5367	2973	8340
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8343	24.261	NaN	48971	30	0	4614.2	0.106			+	-1	GMRAGSLTSRM	11	87	400.19405848604345	1197.5603460583304	3	400.1939697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Oxidation (M)	_GM(Oxidation (M))RAGSLTSRM(Oxidation (M))_	REV__ENST00000429650.1_1_2:96949732-96950127:-|nuORF;REV__ENST00000480242.1_1_2:96950067-96950127:-|nuORF	42.33807565288922	0.5259510355945483	6				NaN	NaN	0	NaN	5368	2973	8340
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8344	24.263	NaN	13346	30	0	2446.8	0.106				-1	 	0	73	386.5487992725346	1156.6245684178039	3	386.54852294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5369	2973	8340
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8345	24.264	NaN	23769	30	0	5565.6	0.106				-1	SNTCLGPSI	9	71	474.72609406028965	947.4376351873793	2	474.72601318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_SNTC(Carbamidomethyl (C))LGPSI_	ENSG00000186340|ENST00000617924|THBS2	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	5370	2973	8340
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8346	24.266	NaN	4133.1	30	0	381.19	0.106	+			16069	HAYLSKNSL	9	68	516.7769397201148	1031.5393265070295	2	517.271240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HAYLSKNSL_	ENSG00000131236|ENST00000372805|CAP1;ENST00000417455.1_1_10:44100293-44100833:-|nuORF;ENST00000461993.1_1_1:40535258-40537202:+|nuORF;ENST00000476047.1_1_3:76483919-76484456:+|nuORF;ENST00000494114.1_1_1:40536414-40537202:+|nuORF;nc|ENSG00000131236|Q01518-2|CAP1	56.72105179125745	0.24094814563026265	6				NaN	NaN	0	NaN	5371	2973	8340
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8347	24.268	NaN	21675	30	0	3048.7	0.036	+			38207	SQFSGKITVK	10	83	547.8143672059375	1093.614181478675	2	547.8165893554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SQFSGKITVK_	ENSG00000075568|ENST00000186436|TMEM131;TMEM131|p.G555Wfs*10|1|0.32|ENSG00000075568|chr2:97812704-97812705|-/A|frameshift_variant;TMEM131|p.L1469Tfs*5|1|0.43|ENSG00000075568|chr2:97772340-97772341|-/T|frameshift_variant;TMEM131|p.L538Ffs*27|1|0.09|ENSG00000075568|chr2:97813974-97813975|-/A|frameshift_variant;TMEM131|p.N815Ifs*2|1|0.27|ENSG00000075568|chr2:97802749-97802749|T/-|frameshift_variant;TMEM131|p.N815Kfs*9|1|0.31|ENSG00000075568|chr2:97802748-97802749|-/T|frameshift_variant	144.69833601371718	0.009501412318172059	6				NaN	NaN	0	NaN	5372	2973	8340
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8366	24.306	NaN	25217	30	0	4622.2	0.214	+			11974	FVNDDRHVM	9	63	378.17835074691993	1131.5132228409598	3	378.1782531738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FVNDDRHVM_	ENSG00000129351|ENST00000588657|ILF3;ENST00000587928.5_1_19:10781281-10792148:+|nuORF;nc|ENSG00000129351|Q12906-2|ILF3;nc|ENSG00000129351|Q12906-3|ILF3;nc|ENSG00000129351|Q12906-4|ILF3;nc|ENSG00000129351|Q12906-5|ILF3;nc|ENSG00000129351|Q12906-6|ILF3;nc|ENSG00000129351|Q12906|ILF3	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	5388	2976	8365
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8367	24.309	NaN	46886	30	0	6783	0.106	+			31394	QKKERKQELK	10	105	438.93343364332793	1313.7784715301839	3	438.93310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QKKERKQELK_	ENSG00000198901|ENST00000394249|PRC1;ENST00000417173.6_1_15:91524704-91537723:-|nuORF;ENST00000557763.5_1_15:91524929-91537713:-|nuORF;ENST00000560605.1_1_15:91524929-91537723:-|nuORF;nc|ENSG00000198901|O43663-2|PRC1;nc|ENSG00000198901|O43663-3|PRC1;nc|ENSG00000198901|O43663-4|PRC1	45.908116695636124	0.4947047446361497	6				NaN	NaN	0	NaN	5389	2976	8365
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8368	24.312	NaN	9683.4	30	0	882.27	0.106	+			11014	FEKDVKGESL	10	81	576.3010408909036	1150.587528848607	2	576.301025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FEKDVKGESL_	ENSG00000119888|ENST00000263735|EPCAM	95.4829727501206	0.09968275784893506	6				NaN	NaN	0	NaN	5390	2976	8365
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8369	24.313	NaN	4872.7	30	0	540.55	0.106	+			36350	SESSVKVRL	9	65	502.79042058656063	1003.5662882399213	2	502.7904052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SESSVKVRL_	ENSG00000114098|ENST00000469044|ARMC8;ENST00000460495.5_1_3:137956301-138014731:+|nuORF;ENST00000466762.1_1_3:137982532-137982673:+|nuORF;nc|ENSG00000114098|Q8IUR7-2|ARMC8;nc|ENSG00000114098|Q8IUR7-3|ARMC8;nc|ENSG00000114098|Q8IUR7-7|ARMC8;nc|ENSG00000114098|Q8IUR7-8|ARMC8	98.62937762414208	0.04060045538121712	6				NaN	NaN	0	NaN	5391	2976	8365
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8370	24.315	NaN	13561	30	0	2362.3	0.106	+			16070	HAYLSKNSL	9	83	516.7769397201148	1031.5393265070295	2	516.7774658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HAYLSKNSL_	ENSG00000131236|ENST00000372805|CAP1;ENST00000417455.1_1_10:44100293-44100833:-|nuORF;ENST00000461993.1_1_1:40535258-40537202:+|nuORF;ENST00000476047.1_1_3:76483919-76484456:+|nuORF;ENST00000494114.1_1_1:40536414-40537202:+|nuORF;nc|ENSG00000131236|Q01518-2|CAP1	163.1509380574825	0.003936019289634439	6				NaN	NaN	0	NaN	5392	2976	8365
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8371	24.317	NaN	3232.7	30	0	916.69	0.034	+			10099	ESLKMVKK	8	61	481.78885861982775	961.5631643064555	2	481.7887268066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ESLKMVKK_	ENSG00000176635|ENST00000336726|HORMAD2	39.252832667884924	0.6609488554722044	6				NaN	NaN	0	NaN	5393	2976	8365
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8372	24.318	NaN	2254.3	30	0	270.91	0.142	+			16558	HEYVDQPKM	9	61	573.7659418911283	1145.5173308490564	2	573.7659912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HEYVDQPKM_	ENSG00000092421|ENST00000343348|SEMA6A;nc|ENSG00000092421|Q9H2E6-2|SEMA6A;SEMA6A|p.K1013Nfs*11|1|0.19|ENSG00000092421|chr5:116446670-116446670|G/-|frameshift_variant;SEMA6A|p.K1013Qfs*15|1|0.45|ENSG00000092421|chr5:116446669-116446670|-/G|frameshift_variant;SEMA6A|p.N990Mfs*8|1|0.1|ENSG00000092421|chr5:116446737-116446738|-/GTACA|frameshift_variant;SEMA6A|p.R918Efs*23|1|0.25|ENSG00000092421|chr5:116446955-116446956|-/T|frameshift_variant;SEMA6A|p.V881Ffs*20|2|0.21|ENSG00000092421|chr5:116447069-116447069|G/-|frameshift_variant	134.7655990226056	0.012935733000282069	6				NaN	NaN	0	NaN	5394	2976	8365
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8391	24.357	NaN	55291	30	0	10451	0.214	+			14729	GTISAITSK	9	85	439.25310494381364	876.4916569544273	2	439.2528076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTISAITSK_	ENSG00000145113|ENST00000463781|MUC4;MUC4|p.L3985Ffs*274|1|0.3|ENSG00000145113|chr3:195779627-195779627|G/-|frameshift_variant;MUC4|p.N4902Tfs*8|1|0.37|ENSG00000145113|chr3:195761027-195761027|T/-|frameshift_variant;nc|ENSG00000145113|Q99102-10|MUC4;nc|ENSG00000145113|Q99102-11|MUC4;nc|ENSG00000145113|Q99102-15|MUC4;nc|ENSG00000145113|Q99102-16|MUC4;nc|ENSG00000145113|Q99102-17|MUC4;nc|ENSG00000145113|Q99102-2|MUC4;nc|ENSG00000145113|Q99102-3|MUC4;nc|ENSG00000145113|Q99102-5|MUC4;nc|ENSG00000145113|Q99102-7|MUC4;nc|ENSG00000145113|Q99102-8|MUC4;nc|ENSG00000145113|Q99102-9|MUC4	190.2614974402762	0.00026591377982909756	6				NaN	NaN	0	NaN	5410	2979	8390
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8392	24.361	NaN	27466	30	0	6413.8	0.106	+			47821	VSKLPRTPRMC	11	79	454.2459101247237	1359.7159009743712	3	454.2474365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_VSKLPRTPRM(Oxidation (M))C(Carbamidomethyl (C))_	ENST00000425916.4_1_10:77167483-77167783:+|nuORF	41.080066990542036	0.5431644350485484	6				NaN	NaN	0	NaN	5411	2979	8390
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8393	24.363	NaN	19858	30	0	1639.1	0.106			+	25684	LRGSLETEL	9	94	509.28239477096434	1016.5502366087287	2	509.2824401855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LRGSLETEL_	REV__ENSG00000159337|ENST00000290472|PLA2G4D;REV__nc|ENSG00000159337|Q86XP0-2|PLA2G4D	104.0567914643314	0.03506238181059741	6				NaN	NaN	0	NaN	5412	2979	8390
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8394	24.365	NaN	12510	30	0	1392.2	0.106	+			19857	KEEIVHQL	8	77	498.2799983048798	994.5454436765597	2	498.27960205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEEIVHQL_	ENSG00000085231|ENST00000380822|AK6;nc|ENSG00000085231|Q9Y3D8-2|AK6	120.62098272573253	0.23366758524054274	6				NaN	NaN	0	NaN	5413	2979	8390
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8395	24.366	NaN	6585.9	30	0	1392.5	0.106	+			13144	GGMSIFLKK	9	47	332.85634450333515	995.5472041102055	3	332.8563537597656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_GGM(Oxidation (M))SIFLKK_	ENST00000264995.7_1_3:131220431-131221595:-|nuORF	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	5414	2979	8390
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8396	24.368	NaN	4330.5	30	0	546.63	0.033			+	11806	FSSESAKL	8	65	434.72435634924346	867.434159765287	2	434.7239685058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FSSESAKL_	REV__ENSG00000115548|ENST00000312912|KDM3A;REV__ENST00000470160.1_1_2:86716620-86719239:+|nuORF	53.351449002276354	0.5676011784961348	6				NaN	NaN	0	NaN	5415	2979	8390
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8397	24.369	NaN	4444.1	30	0	703.04	0.138	+			3876	ATAPPGVLK	9	57	427.2607794160549	852.5070058989098	2	427.2605285644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATAPPGVLK_	ENSG00000105538|ENST00000222145|RASIP1	53.351449002276354	0.2690372970092375	6				NaN	NaN	0	NaN	5416	2979	8390
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8415	24.407	NaN	43504	30	0	9366.8	0.214				-1	CFVLQQPMI	9	56	365.5174976270508	1093.5306634813523	3	365.5174255371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_CFVLQQPM(Oxidation (M))I_	ENSG00000173821|ENST00000582970|RNF213;ENST00000559070.5_1_17:78261823-78310301:+|nuORF;nc|ENSG00000173821|Q63HN8-4|RNF213;nc|ENSG00000173821|Q63HN8-5|RNF213;nc|ENSG00000173821|Q63HN8|RNF213;RNF213|p.C5022Lfs*7|1|0.3|ENSG00000173821|chr17:80389237-80389237|G/-|frameshift_variant;RNF213|p.F559L|1|0.33|ENSG00000173821|chr17:80294925-80294925|T/G|missense_variant;RNF213|p.P2167Lfs*64|1|0.09|ENSG00000173821|chr17:80344834-80344835|-/T|frameshift_variant;RNF213|p.Q1953Rfs*50|2|0.13|ENSG00000173821|chr17:80340219-80340219|C/-|frameshift_variant	29.14955571784316	0.5308295550522326	6				NaN	NaN	0	NaN	5431	2982	8414
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8416	24.411	NaN	9812.8	30	0	2880.5	0.106	+			49109	VVLGSGGVGK	10	66	436.7636208450223	871.5126887568446	2	436.7633972167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVLGSGGVGK_	ENSG00000116473|ENST00000369709|RAP1A;ENSG00000123728|ENST00000370874|RAP2C;ENSG00000125249|ENST00000245304|RAP2A;ENSG00000127314|ENST00000250559|RAP1B;ENSG00000181467|ENST00000323534|RAP2B;ENST00000460800.5_1_12:69042504-69044290:+|nuORF;ENST00000494982.1_1_1:112233982-112249293:+|nuORF;ENST00000501412.2_1_12:69042504-69042582:+|nuORF;ENST00000535492.5_2_12:69042504-69047907:+|nuORF;nc|ENSG00000127314|P61224-2|RAP1B;nc|ENSG00000127314|P61224-3|RAP1B;nc|ENSG00000127314|P61224-4|RAP1B;RAP2B|p.F39Lfs*6|1|0.34|ENSG00000181467|chr3:153162808-153162809|TT/-|frameshift_variant	85.16082228582465	0.15877915086237185	6				NaN	NaN	0	NaN	5432	2982	8414
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8417	24.413	NaN	4428.9	30	0	352.71	0.106	+			21243	KLKEYNKL	8	68	518.3135734587605	1034.612593984321	2	518.3137817382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KLKEYNKL_	tr|U7SUA6|U7SUA6_FUSNUMethyltransferasedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01360PE=4SV=1	44.116797842482775	0.6307669463330267	6				NaN	NaN	0	NaN	5433	2982	8414
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8418	24.415	NaN	2403.2	30	0	352.11	0.106	+			39369	STCSPIISK	9	56	468.24692230953707	934.4792916858742	2	468.2466735839844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STCSPIISK_	ENSG00000170606|ENST00000304858|HSPA4;ENST00000514825.1_1_5:132437411-132440125:+|nuORF	49.536043120802724	0.308405419312776	6				NaN	NaN	0	NaN	5434	2982	8414
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8419	24.417	NaN	1941.3	30	0	150.3	0.106	+			47561	VRDEAVQK	8	63	472.7611991939043	943.5078454546086	2	472.7611999511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VRDEAVQK_	ENSG00000124678|ENST00000311875|TCP11;nc|ENSG00000124678|Q8WWU5-2|TCP11;nc|ENSG00000124678|Q8WWU5-3|TCP11;nc|ENSG00000124678|Q8WWU5-4|TCP11;nc|ENSG00000124678|Q8WWU5-5|TCP11;nc|ENSG00000124678|Q8WWU5-6|TCP11;nc|ENSG00000124678|Q8WWU5-7|TCP11	56.72105179125745	0.5342425954139568	6				NaN	NaN	0	NaN	5435	2982	8414
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8420	24.418	NaN	1257.7	30	0	175.81	0.036	+			50805	YEQKIERL	8	55	539.7986450195312	NaN	0	539.7986450195312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YEQKIERL_	ENSG00000054654|ENST00000555002|SYNE2;nc|ENSG00000054654|Q8WXH0|SYNE2;SYNE2|p.A5240Qfs*5|1|0.07|ENSG00000054654|chr14:64152639-64152639|G/-|frameshift_variant;SYNE2|p.D3074Ffs*8|1|0.07|ENSG00000054654|chr14:64053132-64053133|-/TTTCTTTTTCAAATACTTG|frameshift_variant;SYNE2|p.F2563Ifs*28|1|0.34|ENSG00000054654|chr14:64051593-64051594|-/A|frameshift_variant;SYNE2|p.F2840Lfs*3|1|0.38|ENSG00000054654|chr14:64052427-64052427|T/-|frameshift_variant;SYNE2|p.F4992Lfs*13|1|0.39|ENSG00000054654|chr14:64140067-64140067|T/-|frameshift_variant;SYNE2|p.K1189Sfs*4|1|0.35|ENSG00000054654|chr14:64000642-64000642|A/-|frameshift_variant;SYNE2|p.L5308Ifs*18|1|0.12|ENSG00000054654|chr14:64158750-64158751|GG/-|frameshift_variant;SYNE2|p.M1669Wfs*6|1|0.36|ENSG00000054654|chr14:64017707-64017707|A/-|frameshift_variant;SYNE2|p.N1656Mfs*19|1|0.18|ENSG00000054654|chr14:64017669-64017669|A/-|frameshift_variant;SYNE2|p.S1830Kfs*9|1|0.34|ENSG00000054654|chr14:64021985-64021986|-/A|frameshift_variant;SYNE2|p.S6651Rfs*83|1|0.29|ENSG00000054654|chr14:64220596-64220597|-/G|frameshift_variant	30.317721548370564	1.7418937515398478	6				NaN	NaN	0	NaN	5436	2982	8414
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8421	24.419	NaN	1830.3	30	0	174.07	0.141	+			38097	SPVENKEVY	9	67	532.7670288085938	NaN	0	532.7670288085938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SPVENKEVY_	ENSG00000173276|ENST00000310826|ZBTB21	44.377184641726394	0.24544280798894275	6				NaN	NaN	0	NaN	5437	2982	8414
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8440	24.457	NaN	3854.5	30	0	552.39	0.214			+	31052	QEVYKYRT	8	66	543.7827383712738	1085.5509238093475	2	543.782958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QEVYKYRT_	REV__sp|F5HET4|U131A_HCMVMProteinUL131AOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL131APE=1SV=1	60.97194046774394	0.49215940876911696	6				NaN	NaN	0	NaN	5453	2985	8439
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8441	24.46	NaN	13918	30	0	2791.4	0.106	+			37629	SLQEVTIHEK	10	64	395.21547623246147	1182.6245992975844	3	395.2151794433594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLQEVTIHEK_	ENSG00000153107|ENST00000341068|ANAPC1;ENST00000426186.1_3_2:87098444-87121919:+|nuORF;ENST00000467878.1_1_2:112638162-112638411:-|nuORF;ENST00000489177.1_1_2:112630836-112638411:-|nuORF	40.05817265558897	0.5486090488315611	6				NaN	NaN	0	NaN	5454	2985	8439
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8442	24.462	NaN	3392.6	30	0	337.92	0.106				-1	EKMVSIAAK	9	64	496.7746903870693	NaN	0	496.7740783691406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_EKM(Oxidation (M))VSIAAK_	ENST00000366977.7_1_1:212911765-212911807:-|nuORF	47.95952297671804	0.22075498469600283	6				NaN	NaN	0	NaN	5455	2985	8439
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8443	24.464	NaN	3608.9	30	0	766.82	0.106	+			38472	SSASILESK	9	64	461.24802061215087	920.4814882911018	2	461.2477111816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSASILESK_	ENSG00000136628|ENST00000366923|EPRS1	70.8162118820467	0.13725933411854815	6				NaN	NaN	0	NaN	5456	2985	8439
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8444	24.466	NaN	6928	30	0	632.28	0.106			+	9449	EKLRGCSPF	9	74	518.7679166055642	NaN	0	518.767822265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EKLRGCSPF_	REV__nc|ENSG00000157168|Q02297-9|NRG1	60.97194046774394	0.14517358171632622	6				NaN	NaN	0	NaN	5457	2985	8439
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8445	24.468	NaN	5816.4	30	0	2185.1	0.106	+			23247	KYIKEAVRL	9	55	373.9010532629103	1118.681330388931	3	373.9009704589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KYIKEAVRL_	ENSG00000139926|ENST00000344768|FRMD6;nc|ENSG00000139926|Q96NE9-2|FRMD6	46.45678178249821	0.34452392205506005	6				NaN	NaN	0	NaN	5458	2985	8439
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8446	24.47	NaN	2122.6	30	0	300.8	0.032			+	29427	PCCVIAVL	8	49	409.21956374367403	816.4245745541481	2	409.2191162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PCCVIAVL_	REV__ENSG00000169618|ENST00000303786|PROKR1	33.49298260027079	0.7007254697536482	6				NaN	NaN	0	NaN	5459	2985	8439
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8464	24.506	NaN	28077	30	0	1958.8	0.214	+			16390	HENKGVYV	8	101	473.24325857076155	944.4719642083231	2	473.242919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HENKGVYV_	ENSG00000128928|ENST00000487418|IVD;nc|ENSG00000128928|P26440-2|IVD;nc|ENSG00000128928|P26440|IVD	50.0245360154114	0.5941082100236891	6				NaN	NaN	0	NaN	5474	2988	8463
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8465	24.51	NaN	42359	30	0	5034.9	0.106	+			42632	TAVEAGRAL	9	86	444.2507535307859	886.4869541283718	2	444.2507019042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAVEAGRAL_	ENSG00000032444|ENST00000600737|PNPLA6;nc|ENSG00000032444|Q8IY17-2|PNPLA6;nc|ENSG00000032444|Q8IY17-3|PNPLA6;nc|ENSG00000032444|Q8IY17-5|PNPLA6;nc|ENSG00000032444|Q8IY17|PNPLA6;PNPLA6|p.S1175Pfs*10|1|0.55|ENSG00000032444|chr19:7558944-7558944|G/-|frameshift_variant	109.47833844074708	0.029530294723441826	6				NaN	NaN	0	NaN	5475	2988	8463
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8466	24.512	NaN	89870	30	0	30693	0.106	+			4571	ATLEETLVKKK	11	91	420.5905769382389	1258.7499014149166	3	420.5904541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATLEETLVKKK_	ENSG00000254093|ENST00000314787|PINX1	47.227680397652996	0.4590463137409202	6				NaN	NaN	0	NaN	5476	2988	8463
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8467	24.514	NaN	19220	30	0	5227	0.106	+			39954	STMGYMMAK	9	72	518.2187707489433	1034.4229885646864	2	518.2195434570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_STM(Oxidation (M))GYMMAK_	ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;ENST00000518337.1_1_8:74128289-74128592:-|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P	110.11987700582712	0.028875675806141952	6				NaN	NaN	0	NaN	5477	2988	8463
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8468	24.515	NaN	116530	30	0	74904	0.106				-1	 	0	80	322.1936295778554	642.3727062225108	2	322.1936340332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5478	2988	8463
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8469	24.517	NaN	2852	30	0	345.59	0.035	+			36860	SIFKQPVTK	9	63	524.3133758038082	1046.6121986744163	2	524.314208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SIFKQPVTK_	ENSG00000071655|ENST00000434436|MBD3;ENSG00000134046|ENST00000256429|MBD2;ENST00000590830.5_1_19:1578341-1584901:-|nuORF;nc|ENSG00000071655|O95983-2|MBD3	45.02220120713402	0.3613509778819777	6				NaN	NaN	0	NaN	5479	2988	8463
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8470	24.518	NaN	2301.3	30	0	241.07	0.139			+	50990	YIQCGEEL	8	59	477.71519590449196	953.415838875784	2	477.71533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YIQCGEEL_	REV__ENSG00000169228|ENST00000303251|RAB24;REV__ENST00000471466.5_1_5:176729278-176730289:-|nuORF;REV__ENST00000478234.5_1_5:176729278-176730289:-|nuORF;REV__ENST00000495458.5_1_5:176729278-176730108:-|nuORF	35.200714571348534	0.6875396545722289	6				NaN	NaN	0	NaN	5480	2988	8463
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8490	24.558	NaN	60502	30	0	14977	0.214	+			40040	STMVDVRVMKK	11	87	431.90524623007656	1292.6939092904297	3	431.9053649902344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STMVDVRVMKK_	ENSG00000085224|ENST00000373344|ATRX;nc|ENSG00000085224|P46100-2|ATRX;nc|ENSG00000085224|P46100-3|ATRX;nc|ENSG00000085224|P46100-4|ATRX;nc|ENSG00000085224|P46100-5|ATRX	77.53327743719008	0.17293716712445248	6				NaN	NaN	0	NaN	5497	2991	8489
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8491	24.561	NaN	20031	30	0	5852.6	0.106	+			40880	SVFHASLAK	9	68	480.26935469301725	958.5241564528345	2	480.268798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVFHASLAK_	ENSG00000064651|ENST00000262461|SLC12A2;nc|ENSG00000064651|P55011-3|SLC12A2;SLC12A2|p.E1119Rfs*7|1|0.47|ENSG00000064651|chr5:128184417-128184418|-/A|frameshift_variant;SLC12A2|p.P1171Sfs*18|1|0.38|ENSG00000064651|chr5:128186498-128186499|-/TC|frameshift_variant	138.06239232086	0.011389075116295402	6				NaN	NaN	0	NaN	5498	2991	8489
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8492	24.567	NaN	7510.4	30	0	2952.1	0.037	+			40133	STQDTLLIKK	10	64	382.89606310975824	1145.6663599294748	3	382.89581298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STQDTLLIKK_	ENSG00000101825|ENST00000217939|MXRA5;MXRA5|p.Q2683Kfs*44|1|0.34|ENSG00000101825|chrX:3310156-3310156|G/-|frameshift_variant	32.75053402867276	0.6123771875927935	6				NaN	NaN	0	NaN	5499	2991	8489
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8493	24.568	NaN	10703	30	0	5698.1	0.144	+			45445	TVYRNPESFK	10	59	414.21551126723557	1239.6247044019067	3	414.2154541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TVYRNPESFK_	ENSG00000146066|ENST00000274787|HIGD2A	29.550750289552195	0.6385079145554603	6				NaN	NaN	0	NaN	5500	2991	8489
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8509	24.606	NaN	14523	30	0	1775.7	0.215	+			33537	RLCENIAGHLK	11	78	437.57143517704276	1309.6924761313282	3	437.57135009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_RLC(Carbamidomethyl (C))ENIAGHLK_	ENSG00000121691|ENST00000241052|CAT;ENST00000525707.1_1_11:34482779-34490041:+|nuORF	75.56570413236392	0.18934020192193834	6				NaN	NaN	0	NaN	5513	2994	8508
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8510	24.609	NaN	21673	30	0	9727.2	0.106	+			20863	KIMKDILEK	9	88	373.22661301607127	1116.6580096484138	3	373.2264709472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KIMKDILEK_	ENSG00000080824|ENST00000216281|HSP90AA1;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1	85.16082228582465	0.07850854922700509	6				NaN	NaN	0	NaN	5514	2994	8508
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8511	24.612	NaN	4916.9	30	0	425.97	0.106	+			36109	SEKLGGAEV	9	67	445.23510237030786	888.4556518074157	2	445.2347717285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEKLGGAEV_	ENSG00000145192|ENST00000411641|AHSG	61.691277971877994	0.19951612995419254	6				NaN	NaN	0	NaN	5515	2994	8508
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8512	24.614	NaN	5705.1	30	0	1561.7	0.106			+	43655	TISYTDLE	8	66	471.2247504153424	940.4349478974848	2	471.22491455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TISYTDLE_	REV__CUX2|p.A1430Cfs*11|1|0.26|ENSG00000111249|chr12:111348143-111348144|-/C|frameshift_variant;REV__CUX2|p.P1429Lfs*23|1|0.33|ENSG00000111249|chr12:111348144-111348144|C/-|frameshift_variant;REV__ENSG00000111249|ENST00000261726|CUX2	57.81127852772723	0.5234495074909924	6				NaN	NaN	0	NaN	5516	2994	8508
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8513	24.615	NaN	2548.1	30	0	313.59	0.106	+			12623	GEIDKRVEV	9	61	522.7878629824583	1043.5611730317164	2	522.7882080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GEIDKRVEV_	ENSG00000113742|ENST00000265085|CPEB4;nc|ENSG00000113742|Q17RY0-2|CPEB4;nc|ENSG00000113742|Q17RY0-3|CPEB4	54.722347961057174	0.257609425301511	6				NaN	NaN	0	NaN	5517	2994	8508
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8514	24.617	NaN	8321.7	30	0	2071.8	0.034	+			12386	GDYERAVR	8	65	483.24574516677427	964.4769374003486	2	483.2442626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GDYERAVR_	ENSG00000090530|ENST00000319332|P3H2;P3H2|p.V176Rfs*3|1|0.25|ENSG00000090530|chr3:189995398-189995399|-/A|frameshift_variant	55.50420428727701	0.5462892107279674	6				NaN	NaN	0	NaN	5518	2994	8508
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8532	24.656	NaN	57820	30	0	4993.5	0.214	+			43928	TPAGVVNKY	9	101	474.76098505365803	947.5074171741161	2	474.7608337402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TPAGVVNKY_	ENSG00000172893|ENST00000355527|DHCR7	195.8139193141414	5.102640151833004E-05	6				NaN	NaN	0	NaN	5533	2997	8531
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8533	24.659	NaN	15948	30	0	1914.9	0.106	+			11651	FQHVGKAF	8	72	467.25056306229976	932.4865731913995	2	467.2502136230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FQHVGKAF_	ENSG00000254772|ENST00000329251|EEF1G;ENST00000526409.5_1_11:62327153-62342310:-|nuORF;nc|ENSG00000254772|P26641-2|EEF1G;NCEH1-EEF1G|1|fusion	106.41520541750704	0.2471395129373963	6				NaN	NaN	0	NaN	5534	2997	8531
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8534	24.661	NaN	9058.9	30	0	1641.9	0.106	+			19718	KDTGSLLLL	9	68	480.29239695553747	958.570240977875	2	480.2921447753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KDTGSLLLL_	ENSG00000164151|ENST00000296564|ICE1;ICE1|p.H1965Afs*55|1|0.29|ENSG00000164151|chr5:5465219-5465220|-/A|frameshift_variant	66.42927471994793	0.16001998865088202	6				NaN	NaN	0	NaN	5535	2997	8531
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8535	24.663	NaN	5272.4	30	0	646.3	0.106	+			40788	SVDPVSVNR	9	65	486.7577396926118	971.5009264520236	2	486.7585754394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVDPVSVNR_	ENSG00000143437|ENST00000358595|ARNT;ENST00000468970.1_1_1:150804279-150808966:-|nuORF;nc|ENSG00000143437|P27540-2|ARNT;nc|ENSG00000143437|P27540-3|ARNT;nc|ENSG00000143437|P27540-4|ARNT	46.45678178249821	0.34452392205506005	6				NaN	NaN	0	NaN	5536	2997	8531
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8536	24.665	NaN	13548	30	0	2103.7	0.106	+			11888	FTNEGRAL	8	74	454.23515419472966	906.4557554562593	2	454.23486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FTNEGRAL_	ENSG00000170876|ENST00000306077|TMEM43	82.7504851949679	0.3006553482314138	6				NaN	NaN	0	NaN	5537	2997	8531
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8537	24.667	NaN	7689	30	0	4506.6	0.035	+			41423	SVNFLISET	9	54	505.2642411230813	1008.5139293129627	2	505.263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVNFLISET_	ENST00000322313.8_1_2:128482679-128482718:-|nuORF	44.116797842482775	0.37197099687881774	6				NaN	NaN	0	NaN	5538	2997	8531
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8553	24.7	NaN	268290	30	0	115570	0.174	+			49639	VYIEKNDKL	9	99	374.54488273798756	1120.6128188141627	3	374.5447692871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYIEKNDKL_	ENSG00000065361|ENST00000267101|ERBB3;ENST00000546884.1_1_12:56474084-56480451:+|nuORF;ENST00000549472.1_1_12:56480319-56481575:+|nuORF;ERBB3|p.A805Gfs*22|1|0.1|ENSG00000065361|chr12:56097177-56097178|-/G|frameshift_variant;ERBB3|p.A805Hfs*95|1|0.33|ENSG00000065361|chr12:56097178-56097178|G/-|frameshift_variant;ERBB3|p.R1080Vfs*22|1|0.14|ENSG00000065361|chr12:56101093-56101093|C/-|frameshift_variant;nc|ENSG00000065361|P21860-3|ERBB3;nc|ENSG00000065361|P21860-4|ERBB3	134.81075121484326	0.012914550297035062	6				NaN	NaN	0	NaN	5551	3000	8552
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8554	24.703	NaN	27048	30	0	2473.5	0.106	+			34827	RYLSKATTL	9	87	526.8082993705648	1051.6020458079295	2	526.808349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RYLSKATTL_	ENSG00000130177|ENST00000356221|CDC16;nc|ENSG00000130177|Q13042-2|CDC16;nc|ENSG00000130177|Q13042-3|CDC16;nc|ENSG00000130177|Q13042-4|CDC16	148.6902309647307	0.00717441509122429	6				NaN	NaN	0	NaN	5552	3000	8552
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8555	24.706	NaN	31528	30	0	13090	0.106	+			23740	LAYYNFEDL	9	74	383.18163046254847	1146.5230619878455	3	383.181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LAYYNFEDL_	ENSG00000177465|ENST00000326303|ACOT4	31.954861631926434	0.5046124803899898	6				NaN	NaN	0	NaN	5553	3000	8552
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8556	24.707	NaN	7707.2	30	0	1235.5	0.106	+			46289	VEIAKQSV	8	66	437.255616360423	872.496679787646	2	437.2554931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VEIAKQSV_	ENSG00000113558|ENST00000353411|SKP1;ENST00000506450.1_1_4:25624416-25624897:+|nuORF;nc|ENSG00000113558|P63208-2|SKP1	58.22992032128504	0.519305013932957	6				NaN	NaN	0	NaN	5554	3000	8552
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8557	24.709	NaN	12031	30	0	3044.2	0.106	+			41778	SVSPGLYSK	9	68	469.25292287001395	936.4912928068279	2	469.2528076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVSPGLYSK_	ENSG00000101311|ENST00000217289|FERMT1;nc|ENSG00000101311|Q9BQL6-2|FERMT1;nc|ENSG00000101311|Q9BQL6-4|FERMT1	75.04331003522576	0.118981335847003	6				NaN	NaN	0	NaN	5555	3000	8552
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8558	24.711	NaN	10512	30	0	1951.7	0.106			+	32095	QSFPYVSQ	8	74	478.22876686451815	954.4429807958363	2	478.2282409667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QSFPYVSQ_	REV__ENSG00000075407|ENST00000685332|ZNF37A;REV__ZNF37A|p.G296Efs*135|1|0.11|ENSG00000075407|chr10:38118034-38118034|G/-|frameshift_variant	75.04331003522576	0.3648751570195447	6				NaN	NaN	0	NaN	5556	3000	8552
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8559	24.713	NaN	6077.8	30	0	613.26	0.035			+	4462	ATIQCARLQ	9	68	502.27198130198195	1002.5294096707639	2	502.2718811035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATIQCARLQ_	REV__UPF1|p.R255C|1|0.52|ENSG00000005007|chr19:18850821-18850821|C/T|missense_variant	52.936696900407355	0.27249468807391813	6				NaN	NaN	0	NaN	5557	3000	8552
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8577	24.75	NaN	7099.8	30	0	720.19	0.214	+			26560	LTSNAIQL	8	68	430.2478298898887	858.4811068465774	2	430.2475891113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LTSNAIQL_	ENST00000518468.1_3_8:53599460-53658116:-|nuORF	76.7741389293348	0.3504530765139327	6				NaN	NaN	0	NaN	5572	3003	8576
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8578	24.753	NaN	12512	30	0	3564.1	0.106	+			48165	VSYVEVVKK	9	68	350.8779366797883	1049.611980639565	3	350.8778991699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSYVEVVKK_	ENSG00000154556|ENST00000695409|SORBS2;nc|ENSG00000154556|O94875-10|SORBS2;nc|ENSG00000154556|O94875-11|SORBS2;nc|ENSG00000154556|O94875-12|SORBS2;nc|ENSG00000154556|O94875-2|SORBS2;nc|ENSG00000154556|O94875-3|SORBS2;nc|ENSG00000154556|O94875-4|SORBS2;nc|ENSG00000154556|O94875-5|SORBS2;nc|ENSG00000154556|O94875-7|SORBS2;nc|ENSG00000154556|O94875-8|SORBS2;nc|ENSG00000154556|O94875-9|SORBS2;nc|ENSG00000154556|O94875|SORBS2	72.87924865735499	0.12833875048249987	6				NaN	NaN	0	NaN	5573	3003	8576
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8579	24.756	NaN	11465	30	0	2509	0.106			+	10010	ERPTSYKLS	9	69	540.7898870694778	1079.5652212057555	2	540.7885131835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ERPTSYKLS_	REV__ENSG00000133401|ENST00000438447|PDZD2;REV__nc|ENSG00000133401|O15018-2|PDZD2;REV__PDZD2|p.D2774Rfs*7|1|0.29|ENSG00000133401|chr5:32101201-32101202|-/G|frameshift_variant;REV__PDZD2|p.E2629Kfs*37|1|0.23|ENSG00000133401|chr5:32097314-32097314|A/-|frameshift_variant;REV__PDZD2|p.K1843Rfs*31|3|0.26|ENSG00000133401|chr5:32088970-32088970|A/-|frameshift_variant;REV__PDZD2|p.S2770Gfs*12|1|0.04|ENSG00000133401|chr5:32101193-32101194|-/GGGT|frameshift_variant;REV__PDZD2|p.V1845Rfs*6|2|0.38|ENSG00000133401|chr5:32088969-32088970|-/A|frameshift_variant	69.6276240434122	0.14239879520340665	6				NaN	NaN	0	NaN	5574	3003	8576
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8580	24.758	NaN	7545.5	30	0	561.57	0.106			+	26919	LYEKVNEK	8	73	511.779296875	NaN	0	511.779296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LYEKVNEK_	REV__ENOPH1|p.E36K|1|0.31|ENSG00000145293|chr4:82447941-82447941|G/A|missense_variant	84.9155231211612	1.7418937515398478	6				NaN	NaN	0	NaN	5575	3003	8576
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8581	24.759	NaN	9786.4	30	0	1051.6	0.106			+	46234	VEAVSDPDHA	10	70	520.2382286667706	1038.4619044003412	2	520.2381591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VEAVSDPDHA_	REV__ENSG00000138002|ENST00000260570|IFT172;REV__nc|ENSG00000138002|Q9UG01-2|IFT172	44.116797842482775	0.5112108506279902	6				NaN	NaN	0	NaN	5576	3003	8576
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8582	24.761	NaN	6363.8	30	0	1709.7	0.036			+	-1	RGLIGMRMM	9	40	360.85393924920436	1079.539988347813	3	360.8539733886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_RGLIGMRMM(Oxidation (M))_	REV__ENSG00000173991|ENST00000309889|TCAP	34.172542307311794	0.4838870758800184	6				NaN	NaN	0	NaN	5577	3003	8576
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8600	24.798	NaN	13981	30	0	3158.3	0.214	+			48524	VTNNVIRLK	9	56	352.88896135177566	NaN	0	352.8889465332031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTNNVIRLK_	ENSG00000095319|ENST00000372577|NUP188;ENST00000477069.5_1_9:131747266-131765892:+|nuORF;nc|ENSG00000095319|Q5SRE5-2|NUP188;NUP188|p.L837Wfs*19|1|0.15|ENSG00000095319|chr9:128988157-128988157|C/-|frameshift_variant	33.921630207806714	0.3063038642147651	6				NaN	NaN	0	NaN	5592	3006	8599
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8601	24.801	NaN	11317	30	0	1090.7	0.106	+			23670	LASKEIHQF	9	79	536.793197936649	NaN	0	536.7930908203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LASKEIHQF_	ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1	120.8684288430529	0.001996491448359331	6				NaN	NaN	0	NaN	5593	3006	8599
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8602	24.804	NaN	25123	30	0	3314.8	0.106	+			41727	SVSEVVVNR	9	82	494.7748086794429	987.5350644256858	2	494.7745056152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVSEVVVNR_	ENSG00000099821|ENST00000588649|POLRMT;ENST00000578759.1_1_17:60217316-60217976:-|nuORF	176.08678752253132	0.0017279326439731339	6				NaN	NaN	0	NaN	5594	3006	8599
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8603	24.805	NaN	20034	30	0	3536.2	0.106	+			11857	FTAPSTVGK	9	76	454.2477267541591	906.4809005751182	2	454.24725341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FTAPSTVGK_	ENSG00000140694|ENST00000437198|PARN;nc|ENSG00000140694|O95453-2|PARN;nc|ENSG00000140694|O95453-3|PARN;nc|ENSG00000140694|O95453-4|PARN	112.41091882917199	0.026537921851008135	6				NaN	NaN	0	NaN	5595	3006	8599
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8604	24.807	NaN	11206	30	0	6604.8	0.106				-1	KILCIKQT	8	42	335.20361700038467	NaN	0	335.2036437988281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_KILC(Carbamidomethyl (C))IKQT_	ENSG00000204694|ENST00000377149|OR11A1	34.172542307311794	1.7418937515398478	6				NaN	NaN	0	NaN	5596	3006	8599
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8605	24.809	NaN	4283	30	0	653.92	0.035				-1	VMLGFIFVV	9	65	520.7959441923174	1039.5773354514347	2	520.796142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_VM(Oxidation (M))LGFIFVV_	ENSG00000179454|ENST00000396128|KLHL28	29.841539824830324	0.5243625958137083	6				NaN	NaN	0	NaN	5597	3006	8599
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8606	24.81	NaN	5438	30	0	2137.1	0.141			+	33031	REISDTLTM	9	71	533.2656914328587	1064.5168299325173	2	533.2662963867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_REISDTLTM_	REV__ENSG00000006652|ENST00000403825|IFRD1;REV__ENST00000466459.5_1_7:112097053-112108063:+|nuORF;REV__nc|ENSG00000288640|O00458-2|IFRD1	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	5598	3006	8599
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8625	24.848	NaN	62344	30	0	8851.2	0.214			+	20534	KFKNMADMFS	10	120	412.1898521601107	1233.5477270805322	3	412.1898498535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_KFKNMADM(Oxidation (M))FS_	REV__ENSG00000079931|ENST00000367963|MOXD1;REV__nc|ENSG00000079931|Q6UVY6-2|MOXD1	65.15724298150197	0.31893571707528906	6				NaN	NaN	0	NaN	5614	3009	8624
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8626	24.851	NaN	6821.7	30	0	1040.9	0.106	+			16483	HETRLVEV	8	69	491.7694301527956	981.5243073723913	2	491.7690734863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HETRLVEV_	ENSG00000113368|ENST00000261366|LMNB1;ENST00000504788.5_1_5:126112928-126171953:+|nuORF	76.16968421966216	0.35548967748273186	6				NaN	NaN	0	NaN	5615	3009	8624
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8627	24.854	NaN	12209	30	0	2484	0.106	+			16045	HAVGPSTSL	9	59	434.72979419300776	867.4450354528155	2	434.7295227050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HAVGPSTSL_	ENSG00000140262|ENST00000333725|TCF12;nc|ENSG00000140262|Q99081-2|TCF12;nc|ENSG00000140262|Q99081-4|TCF12;nc|ENSG00000140262|Q99081|TCF12;TCF12|p.D536Afs*2|1|0.04|ENSG00000140262|chr15:57263207-57263208|-/C|frameshift_variant;TCF12|p.V474Mfs*18|1|0.15|ENSG00000140262|chr15:57262114-57262123|CTCTGTCAGT/-|frameshift_variant	97.47269410471826	0.04379738608259218	6				NaN	NaN	0	NaN	5616	3009	8624
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8628	24.855	NaN	14994	30	0	6285.6	0.106	+			33209	RFFKTLYCFSN	11	71	475.90426004963945	1424.6909507491184	3	475.9040222167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RFFKTLYCFSN_	ENSG00000205189|ENST00000455036|ZBTB10;nc|ENSG00000205189|Q96DT7-2|ZBTB10;nc|ENSG00000205189|Q96DT7-3|ZBTB10;nc|ENSG00000205189|Q96DT7-4|ZBTB10	20.31501182869353	0.7753667161465326	6				NaN	NaN	0	NaN	5617	3009	8624
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8629	24.857	NaN	5817.5	30	0	401.82	0.106			+	8082	DVSIEDKRRK	10	78	415.9017569613946	1244.6834414843838	3	415.9015197753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DVSIEDKRRK_	REV__ENSG00000156475|ENST00000394411|PPP2R2B;REV__ENSG00000175470|ENST00000455566|PPP2R2D;REV__ENST00000490777.2_10:133754324-133769464:+|nuORF;REV__nc|ENSG00000156475|Q00005-2|PPP2R2B;REV__nc|ENSG00000156475|Q00005-3|PPP2R2B;REV__nc|ENSG00000156475|Q00005-4|PPP2R2B;REV__nc|ENSG00000156475|Q00005-5|PPP2R2B;REV__nc|ENSG00000156475|Q00005-6|PPP2R2B;REV__nc|ENSG00000156475|Q00005-7|PPP2R2B	46.45678178249821	0.4896490706773647	6				NaN	NaN	0	NaN	5618	3009	8624
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8630	24.859	NaN	4589.8	30	0	761.32	0.036	+			19466	KASEVFLQR	9	67	539.3062622125524	1076.5979714919047	2	539.306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KASEVFLQR_	ENSG00000135372|ENST00000257829|NAT10;nc|ENSG00000135372|Q9H0A0-2|NAT10	114.8945686534367	0.024290463251177924	6				NaN	NaN	0	NaN	5619	3009	8624
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8646	24.893	NaN	5606.1	30	0	3405.4	0.214				-1	 	0	32	322.1936295778554	642.3727062225108	2	322.19354248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5632	3012	8645
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8647	24.897	NaN	5874.8	30	0	1155.4	0.106				-1	VATLWMDK	8	63	490.2503483216528	978.4861437101056	2	490.2471923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_VATLWM(Oxidation (M))DK_	nc|ENSG00000157326|Q9BTZ2-3|DHRS4	58.78195531508484	0.5138399468736706	6				NaN	NaN	0	NaN	5633	3012	8645
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8648	24.899	NaN	9936.5	30	0	941.05	0.106	+			33780	RQAELAQWQK	10	76	419.8947100625085	1256.6623007877256	3	419.8946838378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RQAELAQWQK_	ENSG00000183978|ENST00000328434|COA3	96.66504779109242	0.09291513985748291	6				NaN	NaN	0	NaN	5634	3012	8645
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8649	24.901	NaN	4925.6	30	0	742.02	0.106	+			16590	HGFGNVHAY	9	68	501.23324466499696	1000.4519363967939	2	501.2328796386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HGFGNVHAY_	ENSG00000144354|ENST00000306721|CDCA7;nc|ENSG00000144354|Q9BWT1-3|CDCA7;nc|ENSG00000144354|Q9BWT1-5|CDCA7;nc|ENSG00000144354|Q9BWT1-6|CDCA7;nc|ENSG00000144354|Q9BWT1|CDCA7	76.84663266511073	0.11118375776443899	6				NaN	NaN	0	NaN	5635	3012	8645
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8650	24.903	NaN	6246.8	30	0	385.03	0.106	+			16540	HEVLVTTKV	9	75	513.3030179275829	1024.5914829219657	2	513.3027954101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HEVLVTTKV_	DHX40|p.A681T|1|0.17|ENSG00000108406|chr17:59605515-59605515|G/A|missense_variant;ENSG00000108406|ENST00000251241|DHX40;nc|ENSG00000108406|Q8IX18-2|DHX40;nc|ENSG00000108406|Q8IX18-3|DHX40;nc|ENSG00000108406|Q8IX18-4|DHX40	120.8684288430529	0.02067403653475984	6				NaN	NaN	0	NaN	5636	3012	8645
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8651	24.904	NaN	5182.2	30	0	877.4	0.034	+			34230	RTFVGSLGK	9	70	482.78243898669115	963.5503250401823	2	482.7821960449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RTFVGSLGK_	ENSG00000198146|ENST00000356321|ZNF770;ZNF770|p.L495Sfs*10|1|0.15|ENSG00000198146|chr15:34981947-34981951|AATTA/-|frameshift_variant	68.62578634547417	0.14673074753754126	6				NaN	NaN	0	NaN	5637	3012	8645
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8668	24.939	NaN	35691	30	0	12988	0.214	+			4312	ATGKLFAVK	9	85	467.78959553675577	933.5646381403116	2	467.78936767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATGKLFAVK_	ENSG00000183049|ENST00000619168|CAMK1D;nc|ENSG00000183049|Q8IU85-2|CAMK1D	112.41091882917199	0.026537921851008135	6				NaN	NaN	0	NaN	5651	3015	8667
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8669	24.943	NaN	16914	30	0	5072.1	0.106				-1	LAMFVATMGM	10	65	363.17202589117085	1086.4942482737126	3	363.17218017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LAM(Oxidation (M))FVATMGM_	ENSG00000181885|ENST00000360325|CLDN7;nc|ENSG00000181885|O95471-2|CLDN7	29.170058357718403	0.6416167986984785	6				NaN	NaN	0	NaN	5652	3015	8667
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8670	24.945	NaN	15833	30	0	2988.4	0.106	+			45081	TVICSTINK	9	77	518.2785692773678	1034.5425856215354	2	518.279052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_TVIC(Carbamidomethyl (C))STINK_	ACTR3B-JMJD1C|1|fusion;ENSG00000171988|ENST00000399262|JMJD1C;JMJD1C|p.A2114Cfs*5|1|0.04|ENSG00000171988|chr10:63189399-63189400|-/T|frameshift_variant;JMJD1C|p.I2113Kfs*18|1|0.04|ENSG00000171988|chr10:63189400-63189401|-/TT|frameshift_variant;nc|ENSG00000171988|Q15652-2|JMJD1C;nc|ENSG00000171988|Q15652-3|JMJD1C	138.06239232086	0.011389075116295402	6				NaN	NaN	0	NaN	5653	3015	8667
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8671	24.947	NaN	20516	30	0	6332.2	0.106	+			39942	STMGYMAAK	9	79	480.21956837911017	958.4245838250204	2	480.21954345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STMGYMAAK_	ENSG00000080824|ENST00000216281|HSP90AA1;ENST00000436135.1_1_1:158495283-158495625:+|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1	166.67852932204877	0.003333876602083393	6				NaN	NaN	0	NaN	5654	3015	8667
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8672	24.949	NaN	7171.2	30	0	1231.1	0.106			+	-1	IGAAHAGQI	9	56	440.23807226831144	878.4615916034229	2	440.23760986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))IGAAHAGQI_	REV__EML5|p.D1019Efs*4|1|0.07|ENSG00000165521|chr14:88681957-88681958|-/AATATGT|frameshift_variant;REV__EML5|p.G1621Efs*19|1|0.2|ENSG00000165521|chr14:88624982-88624982|C/-|frameshift_variant;REV__EML5|p.N1682Mfs*7|1|0.04|ENSG00000165521|chr14:88621246-88621246|T/-|frameshift_variant;REV__EML5|p.R230Q|1|0.35|ENSG00000165521|chr14:88740409-88740409|C/T|missense_variant;REV__EML5|p.Y478Lfs*2|1|0.25|ENSG00000165521|chr14:88714950-88714951|-/A|frameshift_variant;REV__ENSG00000165521|ENST00000554922|EML5;REV__nc|ENSG00000165521|Q05BV3-2|EML5;REV__nc|ENSG00000165521|Q05BV3-4|EML5;REV__nc|ENSG00000165521|Q05BV3|EML5	71.37791200682192	0.13483053934309522	6				NaN	NaN	0	NaN	5655	3015	8667
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8673	24.951	NaN	4459.5	30	0	1529.5	0.038				-1	 	0	51	404.187679143453	1209.5412080305591	3	404.1875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5656	3015	8667
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8674	24.951	NaN	4737.9	30	0	944.81	0.14	+			22568	KTSNLLLSH	9	68	506.7929949545442	1011.5714369758884	2	506.7929382324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KTSNLLLSH_	ENSG00000008128|ENST00000404249|CDK11A;ENSG00000248333|ENST00000341832|CDK11B;ENST00000598846.1_1_1:1635046-1639660:-|nuORF;nc|ENSG00000008128|Q9UQ88-10|CDK11A;nc|ENSG00000008128|Q9UQ88-3|CDK11A;nc|ENSG00000008128|Q9UQ88-4|CDK11A;nc|ENSG00000008128|Q9UQ88-5|CDK11A;nc|ENSG00000008128|Q9UQ88-9|CDK11A;nc|ENSG00000008128|Q9UQ88|CDK11A;nc|ENSG00000248333|P21127-10|CDK11B;nc|ENSG00000248333|P21127-12|CDK11B;nc|ENSG00000248333|P21127-3|CDK11B;nc|ENSG00000248333|P21127-4|CDK11B;nc|ENSG00000248333|P21127-5|CDK11B;nc|ENSG00000248333|P21127-6|CDK11B;nc|ENSG00000248333|P21127-8|CDK11B;nc|ENSG00000248333|P21127-9|CDK11B;nc|ENSG00000248333|P21127|CDK11B	85.86182877749512	0.07653218437724067	6				NaN	NaN	0	NaN	5657	3015	8667
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8692	24.989	NaN	296100	30	0	87082	0.194	+			41771	SVSNVVITK	9	106	473.7818661004105	945.5491792676211	2	473.78167724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSNVVITK_	ENSG00000085832|ENST00000371733|EPS15;EPS15|p.R789Dfs*14|1|0.37|ENSG00000085832|chr1:51361350-51361350|T/-|frameshift_variant;nc|ENSG00000085832|P42566-2|EPS15	174.8648734531126	0.001936507438084573	6				NaN	NaN	0	NaN	5672	3018	8691
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8693	24.993	NaN	50256	30	0	24405	0.106	+			4234	ATGDMSGLLK	10	86	504.75501498246985	1007.4954770317397	2	504.75482177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_ATGDM(Oxidation (M))SGLLK_	ENSG00000127837|ENST00000248450|AAMP;ENST00000475678.5_1_2:219131145-219134809:-|nuORF;ENST00000489767.5_1_2:219130391-219134818:-|nuORF	146.78539889680295	0.009066311176022962	6				NaN	NaN	0	NaN	5673	3018	8691
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8694	24.995	NaN	13525	30	0	1872.5	0.106	+			39421	STDRLTVLK	9	80	516.8059143915688	1031.5972758499374	2	516.8057250976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STDRLTVLK_	ENSG00000138670|ENST00000264400|RASGEF1B;nc|ENSG00000138670|Q0VAM2-2|RASGEF1B;nc|ENSG00000138670|Q0VAM2-3|RASGEF1B;RASGEF1B|p.T323Lfs*5|1|0.3|ENSG00000138670|chr4:81442338-81442338|T/-|frameshift_variant	84.31045756130733	0.08090600341749445	6				NaN	NaN	0	NaN	5674	3018	8691
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8695	24.997	NaN	25710	30	0	6391	0.106	+			28728	NNQRKKQTK	9	85	382.22185915078813	1143.6437480525644	3	381.8873596191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NNQRKKQTK_	ENST00000485672.2_1_19:42488766-42489464:-|nuORF	49.536043120802724	0.308405419312776	6				NaN	NaN	0	NaN	5675	3018	8691
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8696	24.998	NaN	46224	30	0	12177	0.106				-1	 	0	76	542.9167623227002	1625.7284575683002	3	542.9171752929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5676	3018	8691
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8697	25	NaN	8173	30	0	938.2	0.106	+			47679	VSDSGAHVL	9	70	442.72724720674023	883.4399414802805	2	442.7269592285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VSDSGAHVL_	ENSG00000064102|ENST00000261191|INTS13	115.45897859103373	0.02394878348088707	6				NaN	NaN	0	NaN	5677	3018	8691
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8698	25.002	NaN	8126.1	30	0	499.99	0.034			+	20875	KINLILSK	8	79	464.81311528327365	927.6116776333473	2	464.8128662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KINLILSK_	REV__NPHS1|p.V437I|1|0.53|ENSG00000161270|chr19:35848259-35848259|C/T|missense_variant	93.1432384553994	0.2679547234115296	6				NaN	NaN	0	NaN	5678	3018	8691
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8716	25.038	NaN	34270	30	0	11315	0.214	+			46484	VETGVLKPG	9	75	450.2633891116119	898.5122252900238	2	450.26318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VETGVLKPG_	ENSG00000156508|ENST00000309268|EEF1A1;ENST00000436459.2_1_9:135895553-135896258:+|nuORF;ENST00000450915.1_1_7:88268512-88269193:+|nuORF;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	143.8867514904718	0.008656634767784652	6				NaN	NaN	0	NaN	5693	3021	8715
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8717	25.041	NaN	44161	30	0	8439.5	0.106	+			43220	TEVKSVEM	8	84	461.73092212984557	921.4472913264912	2	461.73095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEVKSVEM_	ENSG00000101210|ENST00000217182|EEF1A2;ENSG00000156508|ENST00000309268|EEF1A1;ENST00000436459.2_1_9:135895553-135896258:+|nuORF;ENST00000447052.1_1_21:24762753-24763314:+|nuORF;ENST00000547505.2_1_12:44054314-44054545:+|nuORF;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	110.11987700582712	0.24509564897437786	6				NaN	NaN	0	NaN	5694	3021	8715
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8718	25.043	NaN	12725	30	0	3349.8	0.106	+			35938	SEGKAYSL	8	68	427.71627454640566	853.4179961596113	2	427.7160949707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEGKAYSL_	ENSG00000180198|ENST00000683442|RCC1;nc|ENSG00000180198|P18754-2|RCC1;RCC1|p.R320W|1|0.47|ENSG00000180198|chr1:28536767-28536767|C/T|missense_variant	87.69643885390035	0.28444366722805053	6				NaN	NaN	0	NaN	5695	3021	8715
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8719	25.045	NaN	15107	30	0	3368.2	0.106	+			2643	AQITATIAK	9	77	458.77669334981414	915.5388337664283	2	458.7764587402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AQITATIAK_	ENSG00000011566|ENST00000263881|MAP4K3;MAP4K3|p.R261Kfs*5|1|0.41|ENSG00000011566|chr2:39325755-39325756|-/T|frameshift_variant;nc|ENSG00000011566|Q8IVH8-2|MAP4K3;nc|ENSG00000011566|Q8IVH8-3|MAP4K3	164.45504665044191	0.003713414289755139	6				NaN	NaN	0	NaN	5696	3021	8715
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8720	25.047	NaN	15180	30	0	4108.1	0.106			+	13513	GLPSGEHL	8	63	405.21143086631207	808.4083087994242	2	405.211181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GLPSGEHL_	REV__ENSG00000155858|ENST00000286307|LSM11	40.5726180659479	0.6527593143185008	6				NaN	NaN	0	NaN	5697	3021	8715
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8721	25.049	NaN	11973	30	0	1654	0.034	+			32738	RAPDVARAL	9	71	484.78538482827656	967.5562167233531	2	484.7849426269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RAPDVARAL_	ENSG00000188157|ENST00000379370|AGRN;nc|ENSG00000188157|O00468-2|AGRN;nc|ENSG00000188157|O00468-3|AGRN;nc|ENSG00000188157|O00468-4|AGRN;nc|ENSG00000188157|O00468-5|AGRN;nc|ENSG00000188157|O00468-7|AGRN;nc|ENSG00000188157|O00468|AGRN	52.936696900407355	0.27249468807391813	6				NaN	NaN	0	NaN	5698	3021	8715
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8722	25.049	NaN	3333.2	30	0	513.74	0.14	+			30610	QARELLAAL	9	64	492.79522326102614	983.5758935888523	2	493.2958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QARELLAAL_	CHERP|p.P585Lfs*70|1|0.22|ENSG00000085872|chr19:16523278-16523278|G/-|frameshift_variant;CHERP|p.Q608Sfs*47|1|0.34|ENSG00000085872|chr19:16523210-16523210|G/-|frameshift_variant;ENSG00000085872|ENST00000546361|CHERP	34.172542307311794	0.4838870758800184	6				NaN	NaN	0	NaN	5699	3021	8715
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8740	25.086	NaN	34423	30	0	8052.9	0.214	+			1974	AIYKTPPGIQK	11	84	405.9082201467159	1214.7028310403477	3	405.90789794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AIYKTPPGIQK_	BCOR|p.K1061Sfs*52|1|0.28|ENSG00000183337|chrX:40071029-40071029|T/-|frameshift_variant;BCOR|p.K839Qfs*5|1|0.26|ENSG00000183337|chrX:40072831-40072832|-/G|frameshift_variant;BCOR|p.K839Sfs*17|1|0.41|ENSG00000183337|chrX:40072832-40072832|G/-|frameshift_variant;BCOR|p.L1646Sfs*28|1|0.06|ENSG00000183337|chrX:40053926-40053926|G/-|frameshift_variant;BCOR|p.L487Hfs*13|1|0.67|ENSG00000183337|chrX:40073886-40073887|-/GTGT|frameshift_variant;BCOR|p.N529Tfs*60|1|0.51|ENSG00000183337|chrX:40073760-40073760|T/-|frameshift_variant;BCOR|p.P1621Qfs*53|2|0.52|ENSG00000183337|chrX:40054000-40054000|G/-|frameshift_variant;BCOR|p.R1215Kfs*30|1|0.14|ENSG00000183337|chrX:40063811-40063812|-/T|frameshift_variant;ENSG00000183337|ENST00000378444|BCOR;ENST00000490976.5_1_X:39931586-39937182:-|nuORF;nc|ENSG00000183337|Q6W2J9-2|BCOR;nc|ENSG00000183337|Q6W2J9-3|BCOR;nc|ENSG00000183337|Q6W2J9-4|BCOR	63.69406221917213	0.2904805327065929	6				NaN	NaN	0	NaN	5714	3024	8739
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8741	25.09	NaN	11873	30	0	1818.7	0.106	+			24086	LEKGKETLL	9	81	515.8107858961235	1029.607018859047	2	515.8109741210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LEKGKETLL_	ENSG00000204592|ENST00000376630|HLA-E	83.6470233535746	0.08277643980271215	6				NaN	NaN	0	NaN	5715	3024	8739
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8742	25.092	NaN	9538.2	30	0	5939.8	0.106	+			15646	GVLGSSKVLAK	11	43	353.55706774878934	1057.649373846568	3	353.55694580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GVLGSSKVLAK_	ENSG00000160216|ENST00000291572|AGPAT3;nc|ENSG00000160216|Q9NRZ7-2|AGPAT3;nc|ENSG00000160216|Q9NRZ7-3|AGPAT3	50.033510581677724	0.4206539900604183	6				NaN	NaN	0	NaN	5716	3024	8739
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8743	25.094	NaN	11745	30	0	2823.8	0.106			+	20979	KKFFPTLEE	9	56	380.20772757885914	NaN	0	380.20819091796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KKFFPTLEE_	REV__CON__P81644	56.72105179125745	0.16330365735109603	6				NaN	NaN	0	NaN	5717	3024	8739
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8744	25.096	NaN	8169.3	30	0	765.23	0.106	+			1373	AEVKEKVVL	9	75	507.8133366813357	1013.6121204294715	2	507.8134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEVKEKVVL_	ENSG00000118898|ENST00000345988|PPL;PPL|p.K1530Gfs*18|1|0.27|ENSG00000118898|chr16:4884058-4884068|GCTCGCGCTTG/-|frameshift_variant	78.26377905018397	0.10505600812668463	6				NaN	NaN	0	NaN	5718	3024	8739
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8745	25.098	NaN	5039.8	30	0	1491.9	0.037			+	-1	SPSPSGIKNCT	11	51	383.1842367812057	NaN	0	383.18426513671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_SPSPSGIKNC(Carbamidomethyl (C))T_	REV__ENSG00000164651|ENST00000418710|SP8;REV__nc|ENSG00000164651|Q8IXZ3-1|SP8;REV__nc|ENSG00000164651|Q8IXZ3-2|SP8;REV__nc|ENSG00000164651|Q8IXZ3|SP8;REV__SP8|p.E482Sfs*8|1|0.36|ENSG00000164651|chr7:20784320-20784320|G/-|frameshift_variant	31.634271133179894	0.4244354679066847	6				NaN	NaN	0	NaN	5719	3024	8739
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8746	25.098	NaN	3605.2	30	0	991.65	0.141			+	43405	TGINAGLIVGL	11	46	343.2096856197643	1026.6072274594928	3	343.2095642089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TGINAGLIVGL_	REV__tr|U7T0A2|U7T0A2_FUSNUPhosphate:Na+symporterOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00913PE=4SV=1	29.170058357718403	0.683821074385409	6				NaN	NaN	0	NaN	5720	3024	8739
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8764	25.138	NaN	20203	30	0	5059.8	0.214	+			2339	AMSARAEAI	9	72	460.23681633517435	918.4590797371487	2	460.2366943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AMSARAEAI_	ENSG00000162244|ENST00000294189|RPL29;ENST00000480306.5_1_3:52027767-52028806:-|nuORF	82.7504851949679	0.08565546331141553	6				NaN	NaN	0	NaN	5735	3027	8763
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8765	25.141	NaN	35717	30	0	19255	0.106	+			32289	QTMSDTTFK	9	82	529.7445915314244	1057.4746301296486	2	529.7452392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QTMSDTTFK_	ENSG00000116489|ENST00000263168|CAPZA1;ENSG00000198898|ENST00000361183|CAPZA2;ENST00000426421.5_1_7:116544367-116557918:+|nuORF;ENST00000466066.1_1_1:113202257-113212751:+|nuORF;ENST00000565906.2_1_15:89532752-89533049:-|nuORF	85.86182877749512	0.07653218437724067	6				NaN	NaN	0	NaN	5736	3027	8763
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8766	25.144	NaN	17883	30	0	5387.6	0.106	+			22445	KTLEDFRVK	9	65	379.2206912332745	1134.6402443000236	3	379.2204895019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KTLEDFRVK_	ENSG00000125991|ENST00000348547|ERGIC3;ENST00000486268.5_1_20:34129846-34130758:+|nuORF;nc|ENSG00000125991|Q9Y282-2|ERGIC3;nc|ENSG00000125991|Q9Y282-3|ERGIC3	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	5737	3027	8763
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8767	25.145	NaN	8841	30	0	2900.8	0.106	+			44514	TSTCSPIISK	10	66	518.7707689225285	1035.526984911857	2	518.7710571289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TSTCSPIISK_	ENSG00000170606|ENST00000304858|HSPA4;ENST00000514825.1_1_5:132437411-132440125:+|nuORF	53.08895987439943	0.42869529153390606	6				NaN	NaN	0	NaN	5738	3027	8763
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8768	25.147	NaN	8162	30	0	1777.4	0.106				-1	LYCALMGIAG	10	70	514.2513869568464	1026.4882209804928	2	514.2515869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_LYCALM(Oxidation (M))GIAG_	ENSG00000108506|ENST00000251334|INTS2;INTS2|p.F1100Lfs*26|2|0.29|ENSG00000108506|chr17:61867978-61867978|A/-|frameshift_variant;INTS2|p.T812Sfs*11|1|0.15|ENSG00000108506|chr17:61877931-61877934|TGTT/-|frameshift_variant;nc|ENSG00000108506|Q9H0H0|INTS2	35.200714571348534	0.5923680232273616	6				NaN	NaN	0	NaN	5739	3027	8763
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8769	25.149	NaN	14465	30	0	4040.1	0.035	+			44761	TTNDIVISK	9	87	495.7769459845007	989.5393390358014	2	495.77667236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TTNDIVISK_	ENSG00000113141|ENST00000417647|IK	143.37361013837676	0.008897369944672323	6				NaN	NaN	0	NaN	5740	3027	8763
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8770	25.15	NaN	2928.5	30	0	351.12	0.141	+			46618	VFVVVRPSDS	10	65	552.8050829285206	1103.5956129238411	2	552.8080444335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VFVVVRPSDS_	ENSG00000148734|ENST00000277942|NPFFR1	54.722347961057174	0.4138398245444204	6				NaN	NaN	0	NaN	5741	3027	8763
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8788	25.189	NaN	20163	30	0	2071.1	0.214			+	9269	EHAKPFRE	8	85	507.2619534156	1012.509353898	2	507.2616271972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EHAKPFRE_	REV__nc|ENSG00000086015|Q6P0Q8-2|MAST2	71.29570347882199	0.39610197767395533	6				NaN	NaN	0	NaN	5756	3030	8787
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8789	25.193	NaN	34568	30	0	6881.9	0.106	+			7227	DAKVAALR	8	73	422.25594936092415	842.4973457886483	2	422.25579833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DAKVAALR_	ENSG00000007202|ENST00000528896|BLTP2;nc|ENSG00000007202|Q14667-2|BLTP2	82.24051045832904	0.30490469762271794	6				NaN	NaN	0	NaN	5757	3030	8787
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8790	25.195	NaN	16566	30	0	1512.4	0.106	+			16404	HEQSRIITV	9	84	541.801625725469	1081.5886985177378	2	541.8016967773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HEQSRIITV_	ENSG00000158006|ENST00000374282|PAFAH2	96.0336014099291	0.047854655524928534	6				NaN	NaN	0	NaN	5758	3030	8787
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8791	25.197	NaN	20043	30	0	5721.7	0.106	+			32691	RAGLPCQDLE	10	77	551.271282822831	1100.528012712462	2	551.2719116210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RAGLPCQDLE_	ENSG00000073578|ENST00000264932|SDHA;ENST00000427841.5_1_3:195698311-195709045:-|nuORF;ENST00000429897.5_1_3:195393072-195404601:+|nuORF;ENST00000504824.5_1_5:218488-235547:+|nuORF;ENST00000505555.5_1_5:218470-251793:+|nuORF;nc|ENSG00000073578|P31040-2|SDHA;nc|ENSG00000073578|P31040-3|SDHA	65.46538089061403	0.31613324008013116	6				NaN	NaN	0	NaN	5759	3030	8787
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8792	25.198	NaN	1698.1	30	0	420.54	0.106				-1	AVIQCLRSK	9	35	358.87449388632405	1073.6016522591722	3	358.8743896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_AVIQC(Carbamidomethyl (C))LRSK_	AKAP9|p.Q3083Nfs*28|1|0.15|ENSG00000127914|chr7:92089389-92089390|-/TGAATATCAAGCAGCTATGGAATGCC|frameshift_variant;ENSG00000127914|ENST00000356239|AKAP9;nc|ENSG00000127914|Q99996-1|AKAP9;nc|ENSG00000127914|Q99996-3|AKAP9;nc|ENSG00000127914|Q99996-5|AKAP9;nc|ENSG00000127914|Q99996-6|AKAP9	32.81241826257853	0.4965981579233955	6				NaN	NaN	0	NaN	5760	3030	8787
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8793	25.2	NaN	8316.3	30	0	1747.6	0.037			+	33137	RERGRPPQGP	10	54	383.8777031717541	1148.6112801154623	3	383.8777160644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RERGRPPQGP_	REV__ENST00000347559.6_1_1:156109356-156109557:+|nuORF	21.68575002086885	0.7027366847906487	6				NaN	NaN	0	NaN	5761	3030	8787
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8794	25.201	NaN	5096.4	30	0	955.02	0.138	+			48830	VVASPIAAR	9	61	442.27154307242637	882.5285332116528	2	442.27130126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VVASPIAAR_	ENSG00000184363|ENST00000331563|PKP3;nc|ENSG00000184363|Q9Y446-2|PKP3	42.396135135203025	0.392153681582562	6				NaN	NaN	0	NaN	5762	3030	8787
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8812	25.24	NaN	10660	30	0	2875	0.214	+			39331	STAVGLVTK	9	65	438.2634831745189	874.5124134158378	2	438.2632751464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STAVGLVTK_	ASH1L|p.H1793Ifs*7|1|0.13|ENSG00000116539|chr1:155438778-155438778|G/-|frameshift_variant;ASH1L|p.I970Lfs*9|1|0.2|ENSG00000116539|chr1:155479962-155479962|T/-|frameshift_variant;ASH1L|p.K1222Rfs*11|4|0.27|ENSG00000116539|chr1:155479205-155479205|T/-|frameshift_variant;ASH1L|p.K1533Sfs*17|1|0.25|ENSG00000116539|chr1:155478272-155478272|T/-|frameshift_variant;ASH1L|p.K2377Nfs*5|1|0.28|ENSG00000116539|chr1:155354570-155354570|T/-|frameshift_variant;ASH1L|p.N1822Tfs*2|1|0.33|ENSG00000116539|chr1:155438690-155438690|T/-|frameshift_variant;ASH1L|p.R712Efs*23|3|0.35|ENSG00000116539|chr1:155480736-155480736|T/-|frameshift_variant;ASH1L|p.S2309Ifs*11|1|0.64|ENSG00000116539|chr1:155357635-155357636|-/T|frameshift_variant;ENSG00000116539|ENST00000392403|ASH1L;nc|ENSG00000116539|Q9NR48|ASH1L	126.24258497203832	0.01742065577488747	6				NaN	NaN	0	NaN	5777	3033	8811
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8813	25.244	NaN	6203.1	30	0	1719.8	0.106	+			43184	TETTKFEKL	9	49	366.20100192915027	1095.5811763876509	3	366.20098876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TETTKFEKL_	CC2D1A|p.G898Vfs*45|1|0.32|ENSG00000132024|chr19:13929638-13929638|G/-|frameshift_variant;ENSG00000132024|ENST00000318003|CC2D1A;ENST00000589138.5_1_19:14029331-14037891:+|nuORF;ENST00000589224.1_1_19:14034393-14038165:+|nuORF;nc|ENSG00000132024|Q6P1N0-2|CC2D1A	34.172542307311794	0.4838870758800184	6				NaN	NaN	0	NaN	5778	3033	8811
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8814	25.246	NaN	8892.1	30	0	1682	0.106	+			26394	LTEAPLNPK	9	66	491.78211723154556	981.5496815298911	2	491.78173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LTEAPLNPK_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000403258.1_1_6:88986231-88986483:-|nuORF;ENST00000446382.2_1_9:6834760-6835018:+|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000502306.1_1_5:15450853-15451165:+|nuORF;ENST00000567299.1_1_19:9629420-9629708:+|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;nc|ENSG00000204434|Q9BYX7|POTEKP	79.71258880314673	0.09879134589249085	6				NaN	NaN	0	NaN	5779	3033	8811
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8815	25.248	NaN	3544.9	30	0	620.1	0.106	+			8499	EATGPGLIPPP	11	62	524.7878813412927	1047.5612097493854	2	524.7881469726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EATGPGLIPPP_	ENSG00000236761|ENST00000314099|CTAGE9;nc|ENSG00000288784|Q8IX94|CTAGE4	47.657333605630114	0.4531673460382624	6				NaN	NaN	0	NaN	5780	3033	8811
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8816	25.25	NaN	2382.4	30	0	655.34	0.106	+			17896	IGENRLVMGGP	11	50	381.53783694216065	1141.591681426682	3	381.5377502441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IGENRLVMGGP_	ENSG00000104872|ENST00000262265|PIH1D1;ENST00000595633.5_1_19:49949641-49950433:-|nuORF;ENST00000602076.5_1_19:49949641-49950083:-|nuORF;PIH1D1|p.Q250Sfs*6|1|0.25|ENSG00000104872|chr19:49446634-49446634|G/-|frameshift_variant	27.047317107675042	0.7060868989289394	6				NaN	NaN	0	NaN	5781	3033	8811
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8817	25.251	NaN	2740.7	30	0	289.48	0.034	+			30138	PRVQEKPD	8	52	484.7615881403335	967.508623347467	2	484.7611083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PRVQEKPD_	ENSG00000099331|ENST00000682292|MYO9B;MYO9B|p.A2017Pfs*36|1|0.42|ENSG00000099331|chr19:17211760-17211760|G/-|frameshift_variant;MYO9B|p.K1385Sfs*68|1|0.45|ENSG00000099331|chr19:17198220-17198220|A/-|frameshift_variant;MYO9B|p.R2060Gfs*68|2|0.32|ENSG00000099331|chr19:17212009-17212009|C/-|frameshift_variant;nc|ENSG00000099331|Q13459-2|MYO9B	21.9598887501803	0.7897753010812679	6				NaN	NaN	0	NaN	5782	3033	8811
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8818	25.252	NaN	5800.4	30	0	488.22	0.139			+	26991	LYNAVNQL	8	73	467.7536774490219	933.4928019648438	2	467.7530822753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LYNAVNQL_	REV__ENSG00000178394|ENST00000323865|HTR1A;REV__HTR1A|p.R65H|1|0.27|ENSG00000178394|chr5:63961526-63961526|C/T|missense_variant	71.37791200682192	0.3954169775488141	6				NaN	NaN	0	NaN	5783	3033	8811
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8836	25.292	NaN	21467	30	0	7380.6	0.214	+			39204	STAAVGVLK	9	76	423.2581885209096	844.5018241086192	2	423.258056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STAAVGVLK_	ENSG00000081019|ENST00000261441|RSBN1;ENST00000476412.5_1_1:114308604-114340019:-|nuORF	118.74307786436346	0.02196067127630568	6				NaN	NaN	0	NaN	5798	3036	8835
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8837	25.295	NaN	23951	30	0	3335.4	0.106	+			12301	GDAARYHLV	9	86	501.2616747767747	1000.5087966203495	2	501.2611083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GDAARYHLV_	ENSG00000183161|ENST00000327470|FANCF	42.396135135203025	0.392153681582562	6				NaN	NaN	0	NaN	5799	3036	8835
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8838	25.297	NaN	6688.6	30	0	1911.8	0.106	+			45213	TVNSPAIYK	9	67	496.77457534189347	991.534597750587	2	496.7741394042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVNSPAIYK_	ENSG00000183520|ENST00000373014|UTP11;ENST00000488453.1_1_1:38483328-38489297:+|nuORF	75.04331003522576	0.118981335847003	6				NaN	NaN	0	NaN	5800	3036	8835
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8839	25.299	NaN	6138.3	30	0	3932.1	0.106				-1	FKGLMITM	8	53	478.7511590833134	955.4877652334268	2	478.7508544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_FKGLMITM(Oxidation (M))_	ANO10|p.F111Lfs*9|1|0.3|ENSG00000160746|chr3:43600388-43600388|A/-|frameshift_variant	25.450171626174864	0.7628259754767981	6				NaN	NaN	0	NaN	5801	3036	8835
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8840	25.301	NaN	3142.7	30	0	457.84	0.106	+			33763	RPTEFVNHY	9	63	581.7858403561061	1161.557127779012	2	581.7857055664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RPTEFVNHY_	ENSG00000139567|ENST00000388922|ACVRL1	40.05817265558897	0.419577045485086	6				NaN	NaN	0	NaN	5802	3036	8835
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8841	25.303	NaN	9075	30	0	3272.2	0.033	+			36401	SETKVFTA	8	66	441.7319899937022	881.4494270542044	2	441.73175048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SETKVFTA_	ENSG00000137073|ENST00000379238|UBAP2;UBAP2|p.K381Efs*18|1|0.03|ENSG00000137073|chr9:33948506-33948507|-/G|frameshift_variant;UBAP2|p.L380Sfs*2|1|0.03|ENSG00000137073|chr9:33948507-33948508|-/TT|frameshift_variant	71.87747018426188	0.391254423828572	6				NaN	NaN	0	NaN	5803	3036	8835
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8842	25.303	NaN	5414.8	30	0	874.4	0.139	+			37670	SLRIQPVL	8	57	463.29521059385877	924.5758682545176	2	463.29473876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SLRIQPVL_	ENSG00000148357|ENST00000683500|HMCN2;HMCN2|p.P4784Qfs*22|1|0.32|ENSG00000148357|chr9:130430363-130430363|C/-|frameshift_variant;nc|ENSG00000148357|Q8NDA2-1|HMCN2;nc|ENSG00000148357|Q8NDA2-4|HMCN2	27.882242232435846	0.7440473649773525	6				NaN	NaN	0	NaN	5804	3036	8835
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8860	25.34	NaN	22515	30	0	2304.5	0.214			+	45393	TVTQIPLTQ	9	84	500.7874961576888	999.5604393821776	2	500.787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVTQIPLTQ_	REV__ENSG00000165617|ENST00000395153|DACT1;REV__nc|ENSG00000165617|Q9NYF0|DACT1	70.8162118820467	0.13725933411854815	6				NaN	NaN	0	NaN	5819	3039	8859
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8861	25.344	NaN	9508.2	30	0	2822.1	0.106	+			16933	HPNDDDVHF	9	69	548.2281579847643	1094.4417630363284	2	548.228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HPNDDDVHF_	ENSG00000114127|ENST00000392981|XRN1;nc|ENSG00000114127|Q8IZH2-3|XRN1;nc|ENSG00000114127|Q8IZH2|XRN1;XRN1|p.L525Yfs*9|1|0.08|ENSG00000114127|chr3:142414154-142414154|A/-|frameshift_variant;XRN1|p.L671*|1|0.28|ENSG00000114127|chr3:142403765-142403765|A/-|frameshift_variant;XRN1|p.L671Ffs*2|1|0.14|ENSG00000114127|chr3:142403764-142403765|-/AA|frameshift_variant;XRN1|p.M1309Cfs*14|1|0.4|ENSG00000114127|chr3:142335462-142335462|T/-|frameshift_variant;XRN1|p.R1611Gfs*34|5|0.22|ENSG00000114127|chr3:142311801-142311801|T/-|frameshift_variant	84.9155231211612	0.07920012719736333	6				NaN	NaN	0	NaN	5820	3039	8859
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8862	25.346	NaN	12739	30	0	2982	0.106	+			16745	HLPSGVKSL	9	71	469.27684328097064	936.5391336287413	2	469.27655029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HLPSGVKSL_	ENSG00000163069|ENST00000381431|SGCB;nc|ENSG00000163069|Q16585-2|SGCB	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	5821	3039	8859
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8863	25.348	NaN	6002.4	30	0	860.57	0.106			+	18424	ISASGGVVSI	10	65	445.2536305550987	888.4927081769974	2	445.25286865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ISASGGVVSI_	REV__CON__P07744	56.72105179125745	0.3956618550748046	6				NaN	NaN	0	NaN	5822	3039	8859
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8864	25.35	NaN	7719.7	30	0	1659.7	0.106	+			1050	AEKQKGAKSSA	11	66	552.8050829285206	1103.5956129238411	2	553.30419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEKQKGAKSSA_	ENSG00000117152|ENST00000367909|RGS4;ENST00000491263.1_1_1:163043981-163044347:+|nuORF;nc|ENSG00000117152|P49798-2|RGS4;nc|ENSG00000117152|P49798-3|RGS4;nc|ENSG00000117152|P49798-5|RGS4	55.08391021199286	0.3673379875553588	6				NaN	NaN	0	NaN	5823	3039	8859
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8865	25.352	NaN	7487.7	30	0	1029.9	0.106			+	11463	FNGNEKRY	8	69	514.2513869568464	1026.4882209804928	2	514.2514038085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FNGNEKRY_	REV__tr|U7T0G1|U7T0G1_FUSNUS1motifdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00806PE=4SV=1	35.61828744233558	0.6843154725607303	6				NaN	NaN	0	NaN	5824	3039	8859
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8866	25.353	NaN	6378.2	30	0	1284.8	0.033	+			9076	EGGTLKAVK	9	62	451.76867953442036	901.5228061356407	2	451.7687072753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EGGTLKAVK_	ENSG00000120733|ENST00000314358|KDM3B;KDM3B|p.K627Nfs*60|1|0.38|ENSG00000120733|chr5:138391505-138391505|C/-|frameshift_variant;KDM3B|p.P1317Rfs*10|1|0.45|ENSG00000120733|chr5:138420936-138420936|C/-|frameshift_variant	49.536043120802724	0.308405419312776	6				NaN	NaN	0	NaN	5825	3039	8859
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8884	25.391	NaN	7762.6	30	0	673.47	0.214	+			10463	EVNPNTRVM	9	71	530.2661940905674	1058.5178352479347	2	530.2666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EVNPNTRVM_	ENSG00000123353|ENST00000243045|ORMDL2;ENSG00000128699|ENST00000392349|ORMDL1;ENSG00000172057|ENST00000304046|ORMDL3;nc|ENSG00000172057|Q8N138-4|ORMDL3	93.1432384553994	0.056003526918089595	6				NaN	NaN	0	NaN	5840	3042	8883
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8885	25.394	NaN	11527	30	0	2609.4	0.106	+			39100	SSSTVSYLK	9	67	486.2556202974563	970.4966876617126	2	486.2555236816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSSTVSYLK_	ABCA1|p.L2013*|1|0.14|ENSG00000165029|chr9:104788457-104788457|A/-|frameshift_variant;ENSG00000165029|ENST00000374736|ABCA1	80.45461616416974	0.09558281504443908	6				NaN	NaN	0	NaN	5841	3042	8883
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8886	25.397	NaN	5817	30	0	1011	0.106	+			5566	AVAQAIMSK	9	67	459.7573559428307	917.5001589524614	2	459.7573547363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVAQAIMSK_	ENSG00000099998|ENST00000327365|GGT5;nc|ENSG00000099998|P36269-2|GGT5;nc|ENSG00000099998|P36269-3|GGT5	90.60085204095205	0.06317133949006545	6				NaN	NaN	0	NaN	5842	3042	8883
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8887	25.398	NaN	4217.5	30	0	678.13	0.106	+			8151	EAAGPHEAF	9	57	464.7115574680896	927.4085620029792	2	464.711181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EAAGPHEAF_	ENSG00000173275|ENST00000339249|ZNF449;nc|ENSG00000173275|Q6P9G9-2|ZNF449;nc|ENSG00000173275|Q6P9G9-3|ZNF449	65.80317337860623	0.1652391959156183	6				NaN	NaN	0	NaN	5843	3042	8883
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8888	25.4	NaN	5921.1	30	0	2421.8	0.106	+			16830	HPDSRAIMY	9	67	545.2607771664756	1088.507001399751	2	545.2614135742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HPDSRAIMY_	ENSG00000116062|ENST00000234420|MSH6;MSH6|p.F882Lfs*24|1|0.31|ENSG00000116062|chr2:47800626-47800626|T/-|frameshift_variant;MSH6|p.G1105Wfs*3|2|0.25|ENSG00000116062|chr2:47803552-47803553|-/T|frameshift_variant;nc|ENSG00000116062|P52701-2|MSH6;nc|ENSG00000116062|P52701-3|MSH6;nc|ENSG00000116062|P52701-4|MSH6	51.19269402634007	0.2889735674168909	6				NaN	NaN	0	NaN	5844	3042	8883
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8889	25.402	NaN	2267.6	30	0	1195.1	0.106			+	21196	KLDKKIAKS	9	42	344.22490973909885	NaN	0	344.22491455078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KLDKKIAKS_	REV__tr|U7T3Q5|U7T3Q5_FUSNURadicalSAMcoredomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00365PE=4SV=1	16.71738777980365	0.38040106172814914	6				NaN	NaN	0	NaN	5845	3042	8883
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8890	25.404	NaN	16077	30	0	4171.9	0.034	+			41480	SVNSTVLVK	9	68	473.78204556116185	945.5495381891237	2	473.7816162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVNSTVLVK_	ENSG00000160593|ENST00000356289|JAML;nc|ENSG00000160593|Q86YT9-2|JAML;nc|ENSG00000160593|Q86YT9-4|JAML	134.7655990226056	0.012935733000282069	6				NaN	NaN	0	NaN	5846	3042	8883
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8908	25.441	NaN	18319	30	0	4037.5	0.214	+			45202	TVNPQFVQK	9	76	530.7926809452595	1059.5708089573188	2	530.7930297851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVNPQFVQK_	ENSG00000141030|ENST00000268717|COPS3;ENST00000486032.1_1_17:17150414-17150880:-|nuORF;nc|ENSG00000141030|Q9UNS2-2|COPS3	93.1432384553994	0.056003526918089595	6				NaN	NaN	0	NaN	5861	3045	8907
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8909	25.445	NaN	45803	30	0	4974.8	0.106	+			34700	RVTPFILKK	9	98	367.9096242509384	1100.7070433530153	3	367.9095458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RVTPFILKK_	ENSG00000175768|ENST00000321301|TOMM5;ENST00000354833.7_1_5:70213930-70214023:+|nuORF	101.45984612302182	0.0377122763612125	6				NaN	NaN	0	NaN	5862	3045	8907
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8910	25.447	NaN	21391	30	0	9016.9	0.106	+			4289	ATGGTFVVK	9	73	440.2504214521449	878.4862899710898	2	440.25006103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATGGTFVVK_	ENSG00000198208|ENST00000557413|RPS6KL1;ENST00000555834.5_1_14:75375979-75389943:-|nuORF;nc|ENSG00000198208|Q9Y6S9-2|RPS6KL1;nc|ENSG00000198208|Q9Y6S9-4|RPS6KL1	171.53180478179638	0.0025054460641941692	6				NaN	NaN	0	NaN	5863	3045	8907
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8911	25.449	NaN	12506	30	0	2885.5	0.106	+			8157	EAAKGTLTY	9	73	477.2506108599705	952.486668786741	2	477.250244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EAAKGTLTY_	ENST00000367855.7_1_6:134492115-134495951:-|nuORF;ENST00000367857.9_1_6:134495759-134495951:-|nuORF;ENST00000474427.6_1_6:134495647-134495951:-|nuORF;ENST00000530421.5_1_6:134495091-134495951:-|nuORF;ENST00000532856.5_1_6:134494408-134495951:-|nuORF;ENST00000534658.5_1_6:134494506-134495951:-|nuORF;nc|ENSG00000118515|O00141|SGK1	138.8255168832474	0.011031062795199845	6				NaN	NaN	0	NaN	5864	3045	8907
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8912	25.451	NaN	12847	30	0	5227	0.106	+			45235	TVPVEAVTSK	10	68	515.7931088094736	1029.571664685747	2	515.7927856445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TVPVEAVTSK_	ENSG00000085733|ENST00000301843|CTTN;ENST00000393747.3_1_11:70269077-70281851:+|nuORF;nc|ENSG00000085733|Q14247-2|CTTN;nc|ENSG00000085733|Q14247-3|CTTN	49.536043120802724	0.461275219792494	6				NaN	NaN	0	NaN	5865	3045	8907
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8913	25.453	NaN	7084.9	30	0	1887.1	0.032	+			43277	TFGGLGSK	8	54	383.7084315681779	765.4023102031558	2	383.7082824707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TFGGLGSK_	ENSG00000124942|ENST00000378024|AHNAK	27.882242232435846	0.7440473649773525	6				NaN	NaN	0	NaN	5866	3045	8907
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8914	25.453	NaN	9427	30	0	1631.9	0.141	+			34702	RVTPFILKK	9	71	551.360720303243	1100.706887673286	2	551.3610229492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RVTPFILKK_	ENSG00000175768|ENST00000321301|TOMM5;ENST00000354833.7_1_5:70213930-70214023:+|nuORF	54.722347961057174	0.257609425301511	6				NaN	NaN	0	NaN	5867	3045	8907
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8933	25.491	NaN	16441	30	0	2844.4	0.214	+			30707	QDELLYAR	8	74	504.26049841934633	1006.5064439054927	2	504.2601013183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QDELLYAR_	ENSG00000186648|ENST00000342740|CARMIL3;ENST00000559694.5_1_14:24526437-24530034:+|nuORF;nc|ENSG00000186648|Q8ND23-3|CARMIL3	58.2462437865262	0.5191434139742862	6				NaN	NaN	0	NaN	5883	3048	8932
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8934	25.495	NaN	9278.2	30	0	1163	0.106	+			51242	YQEKGVRVL	9	71	546.3141290142147	1090.6137050952293	2	546.314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YQEKGVRVL_	ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2	77.31757898189308	0.1091473830098891	6				NaN	NaN	0	NaN	5884	3048	8932
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8935	25.497	NaN	12848	30	0	5684.9	0.106	+			1802	AIFQEAVHK	9	45	348.1941527773668	1041.5606289323005	3	348.1941223144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AIFQEAVHK_	ENSG00000263528|ENST00000581977|IKBKE;IKBKE|p.R348Dfs*32|1|0.58|ENSG00000263528|chr1:206478987-206478987|C/-|frameshift_variant;nc|ENSG00000263528|Q14164-2|IKBKE	44.116797842482775	0.37197099687881774	6				NaN	NaN	0	NaN	5885	3048	8932
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8936	25.499	NaN	5319.2	30	0	811.51	0.106	+			44539	TSYSSEFSK	9	66	518.2353724062884	1034.4561918793768	2	518.2353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TSYSSEFSK_	ENSG00000182473|ENST00000589210|EXOC7;ENST00000467586.5_1_17:74079731-74084011:-|nuORF;nc|ENSG00000182473|Q9UPT5-2|EXOC7;nc|ENSG00000182473|Q9UPT5-5|EXOC7;nc|ENSG00000182473|Q9UPT5-6|EXOC7;nc|ENSG00000182473|Q9UPT5|EXOC7	85.16082228582465	0.07850854922700509	6				NaN	NaN	0	NaN	5886	3048	8932
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8937	25.5	NaN	17114	30	0	4068.7	0.106	+			26871	LWISFPLCTM	10	85	409.5368310530733	1225.58866375942	3	409.5367736816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_LWISFPLCTM(Oxidation (M))_	ENSG00000181001|ENST00000641645|OR52N1;OR52N1|p.V158Rfs*27|1|0.09|ENSG00000181001|chr11:5788345-5788346|-/GCCATCT|frameshift_variant	41.42661286455405	0.5359995577334734	6				NaN	NaN	0	NaN	5887	3048	8932
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8938	25.502	NaN	8700.9	30	0	1198.3	0.034				-1	LQSALLTQ	8	70	458.260865109157	914.507177285114	2	459.7659606933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LQSALLTQ_	ENST00000526826.1_1_11:118514783-118514897:+|nuORF	35.61828744233558	0.6843154725607303	6				NaN	NaN	0	NaN	5888	3048	8932
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8939	25.503	NaN	8849.3	30	0	1558	0.138	+			36957	SILSGGTPK	9	71	430.2478858705872	858.4812188079744	2	430.24786376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SILSGGTPK_	ENSG00000158402|ENST00000323760|CDC25C;nc|ENSG00000158402|P30307-2|CDC25C	63.53385203322761	0.18415635464017938	6				NaN	NaN	0	NaN	5889	3048	8932
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8957	25.541	NaN	14128	30	0	1312.1	0.214	+			20281	KENQVIVRM	9	80	558.8129017845977	1115.6112506359952	2	558.8136596679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KENQVIVRM_	ENSG00000104413|ENST00000433389|ESRP1;ESRP1|p.L333Sfs*55|1|0.35|ENSG00000104413|chr8:94668009-94668009|G/-|frameshift_variant;ESRP1|p.N512Hfs*7|2|0.33|ENSG00000104413|chr8:94674383-94674384|AA/-|frameshift_variant;ESRP1|p.N512Kfs*8|1|0.48|ENSG00000104413|chr8:94674382-94674383|-/A|frameshift_variant;ESRP1|p.N512Tfs*2|2|0.36|ENSG00000104413|chr8:94674383-94674383|A/-|frameshift_variant;nc|ENSG00000104413|Q6NXG1-2|ESRP1;nc|ENSG00000104413|Q6NXG1-3|ESRP1;nc|ENSG00000104413|Q6NXG1-4|ESRP1;nc|ENSG00000104413|Q6NXG1-5|ESRP1	185.54966270084765	0.0007389233275946833	6				NaN	NaN	0	NaN	5904	3051	8956
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8958	25.545	NaN	6798.4	30	0	1158.5	0.106	+			38418	SSAGPGLLK	9	63	415.24255360462854	828.4705542760571	2	415.24224853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSAGPGLLK_	CON__P08729;CON__Q3KNV1;ENSG00000135480|ENST00000331817|KRT7;ENST00000549638.1_1_12:52641943-52642541:+|nuORF;ENST00000550153.1_1_12:52641566-52642541:+|nuORF;ENST00000552322.5_1_12:52638288-52642544:+|nuORF	93.19546047674547	0.05585629608842056	6				NaN	NaN	0	NaN	5905	3051	8956
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8959	25.547	NaN	5795.5	30	0	1387	0.106	+			28527	NIGKRLNAL	9	65	499.8091824872799	997.6038120413598	2	499.80859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NIGKRLNAL_	ENSG00000138688|ENST00000679879|BLTP1;nc|ENSG00000138688|Q2LD37-4|BLTP1;nc|ENSG00000138688|Q2LD37-6|BLTP1;nc|ENSG00000138688|Q2LD37-7|BLTP1;nc|ENSG00000138688|Q2LD37|BLTP1	44.377184641726394	0.36891676396732553	6				NaN	NaN	0	NaN	5906	3051	8956
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8960	25.549	NaN	4832.4	30	0	689.45	0.106			+	37080	SISGAERVA	9	70	445.23979592351054	NaN	0	445.23968505859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SISGAERVA_	REV__ENST00000601451.5_1_19:41210883-41211201:-|nuORF	68.84614121027924	0.11159004992091766	6				NaN	NaN	0	NaN	5907	3051	8956
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8961	25.551	NaN	4986.1	30	0	646.15	0.106	+			23221	KYGPIRQI	8	57	487.7928005229365	973.571048112673	2	487.7925109863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KYGPIRQI_	ENSG00000115128|ENST00000233468|SF3B6;ENST00000478050.1_1_2:24296944-24299099:-|nuORF	47.91560031466742	0.6071945918984287	6				NaN	NaN	0	NaN	5908	3051	8956
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8962	25.552	NaN	2343.8	30	0	431.31	0.033	+			14523	GTDLEAVAK	9	62	452.2433382339395	902.472123534679	2	452.24261474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTDLEAVAK_	BZW1|p.N285Tfs*11|2|0.26|ENSG00000082153|chr2:200818782-200818782|A/-|frameshift_variant;BZW1|p.N286*|1|0.04|ENSG00000082153|chr2:200818790-200818791|-/T|frameshift_variant;BZW1|p.S325Rfs*19|1|0.04|ENSG00000082153|chr2:200819989-200819990|-/ACAATATAGAA|frameshift_variant;ENSG00000082153|ENST00000409600|BZW1;ENST00000464483.1_1_2:201677931-201680272:+|nuORF;nc|ENSG00000082153|Q7L1Q6-2|BZW1;nc|ENSG00000082153|Q7L1Q6-3|BZW1;nc|ENSG00000082153|Q7L1Q6-4|BZW1	70.8162118820467	0.13725933411854815	6				NaN	NaN	0	NaN	5909	3051	8956
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8963	25.553	NaN	2082.3	30	0	243	0.141	+			33773	RPYDGAASAY	10	58	535.7486623647137	1069.4827717962273	2	535.7493896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RPYDGAASAY_	ENSG00000148396|ENST00000684901|SEC16A;nc|ENSG00000148396|O15027-2|SEC16A;nc|ENSG00000148396|O15027-3|SEC16A;nc|ENSG00000148396|O15027-4|SEC16A;nc|ENSG00000148396|O15027-5|SEC16A;SEC16A|p.P2155Hfs*25|1|0.25|ENSG00000148396|chr9:136447664-136447664|G/-|frameshift_variant	44.377184641726394	0.5088115166961078	6				NaN	NaN	0	NaN	5910	3051	8956
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8981	25.592	NaN	5878.7	30	0	1298.3	0.214	+			26395	LTEAPLNPK	9	65	491.78211723154556	981.5496815298911	2	491.7820129394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LTEAPLNPK_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000403258.1_1_6:88986231-88986483:-|nuORF;ENST00000446382.2_1_9:6834760-6835018:+|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000502306.1_1_5:15450853-15451165:+|nuORF;ENST00000567299.1_1_19:9629420-9629708:+|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;nc|ENSG00000204434|Q9BYX7|POTEKP	134.81075121484326	0.012914550297035062	6				NaN	NaN	0	NaN	5925	3054	8980
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8982	25.596	NaN	5874.8	30	0	631.01	0.106			+	13547	GLSLSAPGTL	10	67	458.260865109157	914.507177285114	2	458.26080322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GLSLSAPGTL_	REV__ENST00000547031.5_1_12:53292389-53294972:-|nuORF	66.42927471994793	0.3073667423445326	6				NaN	NaN	0	NaN	5926	3054	8980
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8983	25.598	NaN	11433	30	0	930.77	0.106	+			7828	DPVEPHGEM	9	77	505.7160612349144	NaN	0	505.7161560058594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DPVEPHGEM_	ENSG00000130726|ENST00000253024|TRIM28;ENST00000601150.5_1_19:59059168-59060232:+|nuORF;nc|ENSG00000130726|Q13263-2|TRIM28	74.25504064058377	0.09106938647426577	6				NaN	NaN	0	NaN	5927	3054	8980
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8984	25.6	NaN	8610.9	30	0	5516.9	0.106	+			17116	HSLHLKDIL	9	61	538.3168596298392	1074.6191663264783	2	538.3170776367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HSLHLKDIL_	ENST00000325222.8_1_7:148396099-148427112:+|nuORF;ENST00000409469.5_1_7:148395333-148427112:+|nuORF	32.75053402867276	0.49717649897795874	6				NaN	NaN	0	NaN	5928	3054	8980
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8985	25.602	NaN	9588.5	30	0	4176.8	0.106			+	-1	VTCCSLLLLLG	11	59	397.8878286408532	1190.6416565227596	3	397.88751220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_VTCC(Carbamidomethyl (C))SLLLLLG_	REV__nc|ENSG00000156170|Q330K2-3|NDUFAF6	38.753607047826485	0.5749975102143227	6				NaN	NaN	0	NaN	5929	3054	8980
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8986	25.603	NaN	2529.3	30	0	348.01	0.035				-1	SLVCSVGSAI	10	67	496.757801676857	991.501050420514	2	496.75762939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_SLVC(Carbamidomethyl (C))SVGSAI_	ENSG00000124406|ENST00000381668|ATP8A1;nc|ENSG00000124406|Q9Y2Q0-2|ATP8A1;nc|ENSG00000124406|Q9Y2Q0-3|ATP8A1	58.78195531508484	0.37691818691852547	6				NaN	NaN	0	NaN	5930	3054	8980
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8987	25.604	NaN	2131.2	30	0	363.6	0.142	+			51465	YVHDAPVRSL	10	66	578.809432481985	1155.60431203077	2	578.8095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YVHDAPVRSL_	ENSG00000125538|ENST00000263341|IL1B;ENST00000487639.1_1_2:113588742-113591137:-|nuORF;ENST00000491056.5_1_2:113587940-113590763:-|nuORF	63.53385203322761	0.33370026130094593	6				NaN	NaN	0	NaN	5931	3054	8980
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9005	25.643	NaN	5841.5	30	0	879.15	0.214	+			46852	VIGPKGMLK	9	70	471.79365631911634	941.5727597050327	2	471.7933044433594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VIGPKGMLK_	ENSG00000103222|ENST00000399410|ABCC1;nc|ENSG00000103222|P33527-2|ABCC1;nc|ENSG00000103222|P33527-4|ABCC1;nc|ENSG00000103222|P33527-6|ABCC1;nc|ENSG00000103222|P33527-9|ABCC1	37.15910966729921	0.4535818937225704	6				NaN	NaN	0	NaN	5946	3057	9004
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9006	25.647	NaN	5859.5	30	0	1125.5	0.106			+	40471	STVVGTSTAV	10	59	461.24806824674914	920.4815835602983	2	461.2473449707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STVVGTSTAV_	REV__ENSG00000060237|ENST00000315939|WNK1;REV__nc|ENSG00000060237|Q9H4A3-2|WNK1;REV__nc|ENSG00000060237|Q9H4A3-4|WNK1;REV__nc|ENSG00000060237|Q9H4A3-5|WNK1;REV__nc|ENSG00000060237|Q9H4A3-6|WNK1;REV__nc|ENSG00000060237|Q9H4A3-7|WNK1	71.87747018426188	0.26198133118427214	6				NaN	NaN	0	NaN	5947	3057	9004
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9007	25.649	NaN	6575.9	30	0	1048.4	0.106			+	8183	EAASKGVLYL	10	74	525.7946177413486	1049.574682549497	2	525.2910766601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EAASKGVLYL_	REV__ENST00000515837.6_1_11:61159565-61159811:+|nuORF	34.172542307311794	0.6007644933930345	6				NaN	NaN	0	NaN	5948	3057	9004
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9008	25.651	NaN	5633.5	30	0	501.91	0.106	+			8186	EAATNELMR	9	73	517.7501477990085	1033.4857426648168	2	517.750244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EAATNELMR_	ENSG00000197181|ENST00000356766|PIWIL2;nc|ENSG00000197181|Q8TC59-2|PIWIL2	110.11987700582712	0.028875675806141952	6				NaN	NaN	0	NaN	5949	3057	9004
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9009	25.653	NaN	5017.4	30	0	805.77	0.106	+			36502	SEYPKNIKV	9	71	539.3005795898547	1076.5866062465093	2	539.30029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SEYPKNIKV_	ENSG00000157227|ENST00000311852|MMP14	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	5950	3057	9004
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9010	25.655	NaN	2241.9	30	0	297.93	0.035	+			25504	LPSNDSSKF	9	62	497.74588778940984	993.4772226456197	2	497.7459411621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LPSNDSSKF_	ENSG00000108312|ENST00000436088|UBTF;nc|ENSG00000108312|P17480-2|UBTF;UBTF|p.S64Wfs*13|1|0.48|ENSG00000108312|chr17:44216573-44216574|AA/-|frameshift_variant	75.04331003522576	0.118981335847003	6				NaN	NaN	0	NaN	5951	3057	9004
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9011	25.655	NaN	3204.4	30	0	327.66	0.138	+			1134	AEMAQNAV	8	49	417.1947246246803	832.3748963161606	2	417.1944885253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AEMAQNAV_	ENSG00000168036|ENST00000349496|CTNNB1	87.75429964447693	0.2842685068779738	6				NaN	NaN	0	NaN	5952	3057	9004
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9029	25.695	NaN	16983	30	0	3010.9	0.214	+			27909	MTSTMTIGK	9	74	485.24064800972553	968.4667430862511	2	485.2406311035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MTSTMTIGK_	ENSG00000131781|ENST00000254090|FMO5	158.07458414430337	0.004987072822166904	6				NaN	NaN	0	NaN	5967	3060	9028
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9030	25.698	NaN	26843	30	0	6323.8	0.106	+			25646	LQTHPNKIK	9	93	360.2170903319626	1077.6294415960879	3	360.217041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LQTHPNKIK_	ENSG00000104447|ENST00000395715|TRPS1;nc|ENSG00000104447|Q9UHF7-3|TRPS1;nc|ENSG00000104447|Q9UHF7|TRPS1;TRPS1|p.N1193Mfs*5|1|0.3|ENSG00000104447|chr8:115414291-115414291|T/-|frameshift_variant;TRPS1|p.N1276Kfs*5|1|0.21|ENSG00000104447|chr8:115414041-115414042|-/T|frameshift_variant	69.6276240434122	0.14239879520340665	6				NaN	NaN	0	NaN	5968	3060	9028
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9031	25.7	NaN	9113	30	0	2519.8	0.106	+			42693	TCTAAHPEL	9	69	471.7209500811082	941.4273472290164	2	471.7205810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TCTAAHPEL_	nc|ENSG00000211890|P01877-1|IGHA2;nc|ENSG00000211890|P01877|IGHA2	76.7741389293348	0.11149722112137898	6				NaN	NaN	0	NaN	5969	3060	9028
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9032	25.702	NaN	2936.9	30	0	934	0.106			+	-1	TSMTKKFQPS	10	43	390.8659730699065	1169.5760898099195	3	390.8656921386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_TSM(Oxidation (M))TKKFQPS_	REV__ENSG00000177294|ENST00000321535|FBXO39	26.063383197487333	0.6669871633831898	6				NaN	NaN	0	NaN	5970	3060	9028
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9033	25.704	NaN	3307.4	30	0	613.49	0.106			+	27414	MKWSHAPWPAV	11	56	437.2211290273855	1308.6415576823565	3	437.220947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MKWSHAPWPAV_	REV__ENST00000283429.10_1_16:4519403-4524606:-|nuORF;REV__ENST00000404295.7_1_16:4519400-4524561:-|nuORF;REV__ENST00000574733.5_1_16:4519403-4524387:-|nuORF	30.568863376406313	0.6691487505135859	6				NaN	NaN	0	NaN	5971	3060	9028
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9034	25.706	NaN	3804.2	30	0	841.18	0.035				-1	VPMEVMGLM	9	64	511.74006468665885	NaN	0	511.7401428222656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_VPMEVM(Oxidation (M))GLM_	ENSG00000115233|ENST00000409682|PSMD14	40.5726180659479	0.27166212580479165	6				NaN	NaN	0	NaN	5972	3060	9028
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9035	25.706	NaN	3268.7	30	0	977.43	0.138			+	8998	EFVTKGVN	8	54	447.2399846364013	892.4654163396026	2	447.2400207519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EFVTKGVN_	REV__ENSG00000204262|ENST00000374866|COL5A2	32.81241826257853	0.7059802730411993	6				NaN	NaN	0	NaN	5973	3060	9028
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9053	25.836	NaN	5782.4	30	0	619.98	0.142	+			10473	EVPRVLSF	8	71	473.77120547006865	NaN	0	473.77130126953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EVPRVLSF_	tr|U7T5S7|U7T5S7_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00069PE=4SV=1	44.53106598305862	1.7418937515398478	6				NaN	NaN	0	NaN	5988	3063	9052
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9072	25.876	NaN	235120	30	0	67032	0.182	+			41852	SVSTVLTSK	9	73	461.26606251885516	920.5175721045104	2	461.26580810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSTVLTSK_	ENSG00000188536|ENST00000251595|HBA2;ENSG00000206172|ENST00000320868|HBA1;HBA1|p.A131T|1|0.07|ENSG00000206172|chr16:177373-177373|G/A|missense_variant	112.10723106719422	0.02684780151337622	6				NaN	NaN	0	NaN	6004	3066	9071
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9073	25.879	NaN	9758.6	30	0	818.06	0.106	+			19932	KEFEGKTLV	9	82	525.7946177413486	1049.574682549497	2	525.7952880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEFEGKTLV_	ENSG00000080824|ENST00000216281|HSP90AA1;ENST00000378770.1_1_4:190394307-190396341:+|nuORF;ENST00000530115.1_1_11:27910903-27911533:-|nuORF;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000205100|Q58FG1|HSP90AA4P	74.1650062923329	0.12277912660386392	6				NaN	NaN	0	NaN	6005	3066	9071
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9074	25.881	NaN	8285.3	30	0	679.96	0.106	+			47791	VSIEAGSAVGK	11	74	509.282090058269	1016.549627183338	2	509.2821044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSIEAGSAVGK_	ENSG00000176945|ENST00000447234|MUC20;ENST00000457750.1_1_3:195341833-195346985:+|nuORF;nc|ENSG00000176945|Q8N307-3|MUC20	154.0112374973812	6.383267724898207E-05	6				NaN	NaN	0	NaN	6006	3066	9071
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9075	25.882	NaN	17450	30	0	2743.8	0.106			+	-1	NVGCDMAL	8	80	440.18821633724076	878.3618797412815	2	440.1883544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_NVGC(Carbamidomethyl (C))DMAL_	REV__ENSG00000165140|ENST00000375326|FBP1;REV__FBP1|p.G294Efs*11|1|0.11|ENSG00000165140|chr9:94603517-94603517|C/-|frameshift_variant	44.116797842482775	0.6307669463330267	6				NaN	NaN	0	NaN	6007	3066	9071
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9076	25.884	NaN	15501	30	0	3445.5	0.106	+			24734	LHRAGTEWQL	10	60	404.21586858890646	1209.6257763669194	3	404.21563720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LHRAGTEWQL_	ENST00000429515.1_1_2:139036197-139036410:+|nuORF	36.446750945000026	0.5818864909973037	6				NaN	NaN	0	NaN	6008	3066	9071
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9077	25.886	NaN	3032.7	30	0	891.2	0.106	+			36643	SGLENIKKL	9	35	334.5377594484911	1000.5914489456734	3	334.5376892089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SGLENIKKL_	ENSG00000153406|ENST00000283429|NMRAL1	18.324413293986947	0.6112419832031293	6				NaN	NaN	0	NaN	6009	3066	9071
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9078	25.888	NaN	2812.3	30	0	223.48	0.035			+	37779	SLWALAVLQ	9	63	500.7926207459645	NaN	0	500.7930603027344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SLWALAVLQ_	REV__ENSG00000177535|ENST00000641149|OR2B11;REV__OR2B11|p.P267Lfs*18|1|0.36|ENSG00000177535|chr1:247451183-247451183|G/-|frameshift_variant	60.97194046774394	0.14517358171632622	6				NaN	NaN	0	NaN	6010	3066	9071
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9096	25.925	NaN	31586	30	0	2928.5	0.215	+			12156	GAIKVFVNK	9	78	488.3029434936013	974.5913340540026	2	488.3027648925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GAIKVFVNK_	ENSG00000131725|ENST00000254029|WDR44;nc|ENSG00000131725|Q5JSH3-2|WDR44;nc|ENSG00000131725|Q5JSH3-4|WDR44;WDR44|p.F898L|1|0.26|ENSG00000131725|chrX:118448939-118448939|C/A|missense_variant	129.68262048586715	0.015338143639892752	6				NaN	NaN	0	NaN	6025	3069	9095
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9097	25.929	NaN	61132	30	0	33187	0.106	+			46631	VGARIYHTI	9	69	515.2956912887548	1028.5768296443096	2	515.2958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VGARIYHTI_	ENSG00000008394|ENST00000396210|MGST1;ENST00000539708.5_1_12:16513351-16516972:+|nuORF;MGST1|p.F135Lfs*15|2|0.15|ENSG00000008394|chr12:16363972-16363972|T/-|frameshift_variant	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	6026	3069	9095
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9098	25.931	NaN	5723.4	30	0	1436.5	0.106	+			47738	VSGISTGIVA	10	67	452.2598151486687	902.5050773641374	2	452.2606506347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSGISTGIVA_	ENSG00000091138|ENST00000340010|SLC26A3;SLC26A3|p.D99Sfs*3|1|0.07|ENSG00000091138|chr7:107791917-107791918|-/AGTTACT|frameshift_variant	42.396135135203025	0.5270658956260207	6				NaN	NaN	0	NaN	6027	3069	9095
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9099	25.933	NaN	7874.5	30	0	2478.8	0.106			+	11218	FIAWLVGIA	9	64	495.2941603410699	988.5737677489399	2	495.293701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FIAWLVGIA_	REV__ENSG00000156959|ENST00000287585|LHFPL4;REV__ENSG00000187416|ENST00000424859|LHFPL3;REV__LHFPL3|p.G78Afs*25|1|0.41|ENSG00000187416|chr7:104329051-104329051|G/-|frameshift_variant	72.61992398637584	0.12946007194610515	6				NaN	NaN	0	NaN	6028	3069	9095
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9100	25.935	NaN	10637	30	0	895.87	0.106			+	25322	LPCHLLLLY	9	75	542.8149083456107	1083.6152637580212	2	542.8154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LPCHLLLLY_	REV__ENST00000547216.1_1_12:57871100-57871594:-|nuORF;REV__ENST00000551000.1_1_12:57871100-57871616:-|nuORF	37.15910966729921	0.4535818937225704	6				NaN	NaN	0	NaN	6029	3069	9095
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9101	25.937	NaN	6116.5	30	0	1313.5	0.039	+			1185	AENLLVISHFS	11	57	410.55582506675	1228.64564580045	3	410.55572509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AENLLVISHFS_	nc|ENSG00000127603|O94854-4|MACF1;nc|ENSG00000127603|O94854|MACF1	23.37791116691581	0.7445759747191538	6				NaN	NaN	0	NaN	6030	3069	9095
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9102	25.937	NaN	7371.2	30	0	2196.3	0.139	+			15784	GVTSQFVSK	9	71	476.75841735819023	951.5022817831805	2	476.75836181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GVTSQFVSK_	ENSG00000168918|ENST00000445964|INPP5D;INPP5D|p.E850Rfs*19|1|0.36|ENSG00000168918|chr2:233193909-233193909|G/-|frameshift_variant;nc|ENSG00000168918|Q92835-2|INPP5D;nc|ENSG00000168918|Q92835-3|INPP5D	40.05817265558897	0.419577045485086	6				NaN	NaN	0	NaN	6031	3069	9095
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9120	25.976	NaN	47656	30	0	7217.7	0.214	+			7337	DAVRTKMVY	9	84	541.7867693037401	1081.5589856742802	2	541.787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DAVRTKMVY_	ENSG00000149100|ENST00000531120|EIF3M;nc|ENSG00000149100|Q7L2H7-2|EIF3M	127.46168284122857	0.016682644177004526	6				NaN	NaN	0	NaN	6046	3072	9119
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9121	25.98	NaN	26428	30	0	7500.6	0.106	+			4893	ATQEGEWKALK	11	74	420.8909274110731	1259.6509528334193	3	420.890869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATQEGEWKALK_	ENSG00000087269|ENST00000416614|NOP14	75.65223720490533	0.18861880313260296	6				NaN	NaN	0	NaN	6047	3072	9119
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9122	25.982	NaN	23319	30	0	4248	0.106	+			11346	FLETTETR	8	79	498.75314634830636	995.4917397634127	2	499.2508850097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FLETTETR_	ENSG00000196233|ENST00000421806|LCOR	63.30626980617807	0.4690498839812213	6				NaN	NaN	0	NaN	6048	3072	9119
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9123	25.984	NaN	7494.1	30	0	1672.6	0.106	+			22480	KTNAIISLK	9	66	494.31357552021154	986.6125981072231	2	494.3132019042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTNAIISLK_	ENST00000539028.1_1_12:10010098-10010200:-|nuORF	72.2432373244024	0.13108886737667413	6				NaN	NaN	0	NaN	6049	3072	9119
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9124	25.986	NaN	7297.8	30	0	3367.8	0.106			+	26235	LSSPRDTPKLT	11	54	405.5630409861399	1213.6672935586198	3	405.562744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSSPRDTPKLT_	REV__ENSG00000197077|ENST00000358431|KIAA1671;REV__KIAA1671|p.S1569Afs*58|1|0.46|ENSG00000197077|chr22:25174289-25174289|C/-|frameshift_variant;REV__KIAA1671|p.T1322Rfs*192|1|0.18|ENSG00000197077|chr22:25041088-25041088|A/-|frameshift_variant	24.519189625965996	0.7326048944360514	6				NaN	NaN	0	NaN	6050	3072	9119
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9125	25.988	NaN	2304	30	0	231.63	0.037	+			34701	RVTPFILKK	9	53	367.9096242509384	1100.7070433530153	3	367.90972900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RVTPFILKK_	ENSG00000175768|ENST00000321301|TOMM5;ENST00000354833.7_1_5:70213930-70214023:+|nuORF	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	6051	3072	9119
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9126	25.988	NaN	5274.7	30	0	750.26	0.14	+			38192	SQFEGSALGK	10	69	512.2590021048796	1022.5034512765593	2	512.2586059570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SQFEGSALGK_	ENSG00000118137|ENST00000236850|APOA1	82.83050618871818	0.17249597090446123	6				NaN	NaN	0	NaN	6052	3072	9119
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9144	26.028	NaN	67872	30	0	25891	0.214	+			14982	GTMTGMLYK	9	72	509.24048900309253	1016.4664250729851	2	509.24078369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_GTM(Oxidation (M))TGMLYK_	ENSG00000178440|ENST00000651763|TIMM23B-AGAP6;ENSG00000204152|ENST00000651259|TIMM23B;ENSG00000265354|ENST00000580018|TIMM23;nc|ENSG00000204152|Q5SRD1-2|TIMM23B	143.8867514904718	0.008656634767784652	6				NaN	NaN	0	NaN	6067	3075	9143
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9145	26.031	NaN	49968	30	0	26345	0.106	+			14714	GTIKDIVTR	9	82	501.80074888914737	1001.5869448450948	2	501.80047607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTIKDIVTR_	ENSG00000196305|ENST00000443024|IARS1;ENST00000490438.1_1_9:95050027-95055918:-|nuORF	94.4091291819064	0.0524345700464502	6				NaN	NaN	0	NaN	6068	3075	9143
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9146	26.033	NaN	11837	30	0	2374.5	0.106				-1	GETPCLLSP	9	68	487.23649480717046	972.4584366811409	2	487.2364807128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_GETPC(Carbamidomethyl (C))LLSP_	ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3;SCYL3|p.N511Ifs*68|1|0.35|ENSG00000000457|chr1:169854907-169854907|T/-|frameshift_variant	55.50420428727701	0.2510918378945873	6				NaN	NaN	0	NaN	6069	3075	9143
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9147	26.035	NaN	5593	30	0	1516.5	0.106	+			49089	VVLDQTGVSK	10	68	523.298277289582	1044.5820016459638	2	523.2981567382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVLDQTGVSK_	ENSG00000180098|ENST00000373830|TRNAU1AP;ENST00000464093.1_1_1:28887839-28891347:+|nuORF;ENST00000484775.1_1_1:28887181-28904036:+|nuORF;ENST00000491577.5_1_1:28887839-28904145:+|nuORF;nc|ENSG00000180098|Q9NX07-2|TRNAU1AP;TRNAU1AP|p.Q222Sfs*29|1|0.24|ENSG00000180098|chr1:28571305-28571305|C/-|frameshift_variant	90.14881205920913	0.1302219035121668	6				NaN	NaN	0	NaN	6070	3075	9143
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9148	26.037	NaN	13145	30	0	2677.6	0.106	+			17036	HPVQHISF	8	66	482.75352430249	963.49249567178	2	482.75341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HPVQHISF_	ENSG00000174989|ENST00000652555|FBXW8;nc|ENSG00000174989|Q8N3Y1-2|FBXW8	99.37495909608758	0.2510236104623939	6				NaN	NaN	0	NaN	6071	3075	9143
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9149	26.039	NaN	1986.5	30	0	368.03	0.038			+	-1	VEDYLTMYL	9	54	594.7786269937664	NaN	0	594.7784423828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))VEDYLTMYL_	REV__EFCAB13|p.S151Y|1|0.51|ENSG00000178852|chr17:47345033-47345033|C/A|missense_variant;REV__EFCAB13|p.S342Afs*25|2|0.23|ENSG00000178852|chr17:47374612-47374612|A/-|frameshift_variant;REV__ENSG00000178852|ENST00000331493|EFCAB13;REV__ENST00000520776.5_1_17:45405719-45473360:+|nuORF;REV__nc|ENSG00000178852|Q8IY85-2|EFCAB13	33.51558372728122	0.30835390848773375	6				NaN	NaN	0	NaN	6072	3075	9143
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9150	26.039	NaN	4034.6	30	0	563.88	0.141			+	9782	ENQVVVKY	8	75	489.7669817270093	977.5194105208186	2	489.7660827636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ENQVVVKY_	REV__DEPDC5|p.C416*|1|0.04|ENSG00000100150|chr22:31806152-31806152|T/-|frameshift_variant;REV__ENSG00000100150|ENST00000651528|DEPDC5;REV__nc|ENSG00000100150|O75140-1|DEPDC5;REV__nc|ENSG00000100150|O75140-2|DEPDC5;REV__nc|ENSG00000100150|O75140-4|DEPDC5;REV__nc|ENSG00000100150|O75140-5|DEPDC5;REV__nc|ENSG00000100150|O75140-6|DEPDC5;REV__nc|ENSG00000100150|O75140-8|DEPDC5;REV__nc|ENSG00000100150|O75140-9|DEPDC5	68.78682469695295	0.41700713582915416	6				NaN	NaN	0	NaN	6073	3075	9143
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9168	26.079	NaN	184050	30	0	98112	0.172	+			30624	QASDVSVKY	9	102	498.75314634830636	995.4917397634127	2	498.7531433105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QASDVSVKY_	ENSG00000047410|ENST00000367478|TPR;nc|ENSG00000047410|P12270-2|TPR;TPR|p.E1141Dfs*29|1|0.08|ENSG00000047410|chr1:186344085-186344086|-/CAGGTAAA|frameshift_variant;TPR|p.G216Rfs*3|1|0.34|ENSG00000047410|chr1:186362887-186362888|-/T|frameshift_variant;TPR|p.P2083Qfs*3|1|0.31|ENSG00000047410|chr1:186323735-186323735|G/-|frameshift_variant;TPR|p.T2133Lfs*63|1|0.03|ENSG00000047410|chr1:186322382-186322383|-/GTACTAATAAG|frameshift_variant;TPR|p.V1142Efs*26|1|0.08|ENSG00000047410|chr1:186344083-186344084|-/TT|frameshift_variant	106.68306549817024	0.032382560583716295	6				NaN	NaN	0	NaN	6088	3078	9167
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9169	26.082	NaN	11724	30	0	5294.2	0.106	+			47088	VLKQQLSLT	9	47	343.8814935801184	1028.6226513405552	3	343.8815002441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VLKQQLSLT_	ENSG00000105072|ENST00000221671|C19orf44	30.503639358989545	0.5181749237905803	6				NaN	NaN	0	NaN	6089	3078	9167
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9170	26.084	NaN	13581	30	0	2230.1	0.106	+			35341	SAPASQASL	9	59	416.21395837463007	830.4133638160602	2	416.2138977050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAPASQASL_	ENSG00000137497|ENST00000393695|NUMA1;ENST00000540626.5_1_11:71714575-71718510:-|nuORF;nc|ENSG00000137497|Q14980-2|NUMA1;nc|ENSG00000137497|Q14980-5|NUMA1	176.08678752253132	0.0017279326439731339	6				NaN	NaN	0	NaN	6090	3078	9167
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9171	26.086	NaN	11115	30	0	1673.4	0.106	+			33427	RIIEPLTSR	9	88	542.8272166909853	1083.6398804487706	2	542.8275756835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RIIEPLTSR_	ENSG00000163918|ENST00000296273|RFC4;ENST00000479307.5_1_3:186508099-186512490:-|nuORF;ENST00000494047.5_1_3:186509405-186522502:-|nuORF;nc|ENSG00000163918|P35249-2|RFC4	89.02883481214508	0.06760336634167786	6				NaN	NaN	0	NaN	6091	3078	9167
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9172	26.087	NaN	8642.3	30	0	2951.3	0.106	+			42694	TCTAAHPEL	9	63	471.7209500811082	941.4273472290164	2	471.72076416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TCTAAHPEL_	nc|ENSG00000211890|P01877-1|IGHA2;nc|ENSG00000211890|P01877|IGHA2	58.78195531508484	0.22376836668196862	6				NaN	NaN	0	NaN	6092	3078	9167
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9173	26.089	NaN	4495	30	0	823.24	0.106	+			50615	YEAAATRL	8	54	447.73724644396356	893.4599399547271	2	447.7374267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YEAAATRL_	ENSG00000167004|ENST00000300289|PDIA3;ENST00000434494.5_1_15:44038867-44063413:+|nuORF;ENST00000471856.1_1_1:146649692-146651075:+|nuORF	58.22992032128504	0.519305013932957	6				NaN	NaN	0	NaN	6093	3078	9167
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9174	26.091	NaN	5525	30	0	1069.9	0.034	+			23704	LATVNSQLK	9	68	487.2875889356387	972.5606249380775	2	487.2872619628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LATVNSQLK_	ENSG00000160460|ENST00000598249|SPTBN4;ENST00000596900.5_1_19:41036434-41060733:+|nuORF;nc|ENSG00000160460|Q9H254-3|SPTBN4;nc|ENSG00000160460|Q9H254-4|SPTBN4;nc|ENSG00000160460|Q9H254-5|SPTBN4	51.19269402634007	0.2889735674168909	6				NaN	NaN	0	NaN	6094	3078	9167
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9192	26.127	NaN	79325	30	0	10315	0.209	+			4418	ATIEEAYSR	9	98	520.2563224009099	1038.4980918686197	2	520.2565307617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATIEEAYSR_	ENSG00000157107|ENST00000430046|FCHO2;nc|ENSG00000157107|Q0JRZ9-2|FCHO2;nc|ENSG00000157107|Q0JRZ9-3|FCHO2	168.25843898104137	0.0030641937004078144	6				NaN	NaN	0	NaN	6109	3081	9191
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9193	26.13	NaN	11972	30	0	4006	0.106	+			3952	ATATGTEILK	10	72	502.7847671102561	1003.5549812873122	2	502.78436279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATATGTEILK_	ENSG00000159593|ENST00000290810|NAE1;ENST00000562757.5_1_16:66857380-66864856:-|nuORF;ENST00000563419.5_1_16:66858748-66864862:-|nuORF;ENST00000564040.6_1_16:66857135-66864856:-|nuORF;ENST00000569963.1_1_16:66860370-66864856:-|nuORF;nc|ENSG00000159593|Q13564-2|NAE1;nc|ENSG00000159593|Q13564-4|NAE1	85.86182877749512	0.1547657473298402	6				NaN	NaN	0	NaN	6110	3081	9191
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9194	26.133	NaN	18850	30	0	6598.6	0.106	+			23678	LASLLSPGSV	10	68	472.27644431988483	942.5383357065697	2	472.2762145996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LASLLSPGSV_	ENSG00000116096|ENST00000234454|SPR;ENST00000498749.1_1_2:73114531-73115553:+|nuORF	68.78682469695295	0.28723163847957256	6				NaN	NaN	0	NaN	6111	3081	9191
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9195	26.134	NaN	13017	30	0	2006.6	0.106	+			8891	EETGAKISV	9	66	467.2479363810294	932.4813198288588	2	467.24761962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EETGAKISV_	ENSG00000121774|ENST00000327300|KHDRBS1;ENST00000307714.12_1_1:32479575-32503673:+|nuORF;KHDRBS1|p.A312Gfs*56|1|0.28|ENSG00000121774|chr1:32037857-32037858|-/G|frameshift_variant;KHDRBS1|p.P237Hfs*19|1|0.32|ENSG00000121774|chr1:32033269-32033269|C/-|frameshift_variant;KHDRBS1|p.P336Hfs*4|1|0.41|ENSG00000121774|chr1:32037932-32037932|C/-|frameshift_variant;nc|ENSG00000121774|Q07666-2|KHDRBS1	85.16082228582465	0.07850854922700509	6				NaN	NaN	0	NaN	6112	3081	9191
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9196	26.136	NaN	5133.2	30	0	764.11	0.106	+			40270	STSQLYTVK	9	62	513.7769369557403	NaN	0	513.7769165039062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STSQLYTVK_	ENSG00000143815|ENST00000272163|LBR	72.87924865735499	0.09578366712754152	6				NaN	NaN	0	NaN	6113	3081	9191
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9197	26.138	NaN	5482.3	30	0	857.98	0.036	+			17822	IEYAKPTRL	9	59	545.8163411531411	1089.6181293730822	2	545.8165283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IEYAKPTRL_	ENSG00000104824|ENST00000221419|HNRNPL;HNRNPL|p.P337Hfs*58|9|0.35|ENSG00000104824|chr19:38840319-38840319|G/-|frameshift_variant;HNRNPL|p.P338Tfs*56|1|0.23|ENSG00000104824|chr19:38840318-38840319|-/G|frameshift_variant;nc|ENSG00000104824|P14866-2|HNRNPL	77.53327743719008	0.1082147015697554	6				NaN	NaN	0	NaN	6114	3081	9191
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9198	26.139	NaN	1550.1	30	0	198.48	0.138				-1	 	0	31	335.2057117622683	668.3968705913367	2	335.2057800292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6115	3081	9191
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9216	26.178	NaN	19652	30	0	4151.6	0.214	+			39183	SSYPVCVSK	9	67	485.2389909560216	968.4634289788432	2	485.2388916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSYPVCVSK_	ENSG00000089127|ENST00000202917|OAS1;ENST00000549820.1_1_12:113344820-113354315:+|nuORF;nc|ENSG00000089127|P00973-2|OAS1;nc|ENSG00000089127|P00973-3|OAS1;nc|ENSG00000089127|P00973-4|OAS1;OAS1|p.N280Tfs*8|1|0.07|ENSG00000089127|chr12:112916689-112916689|A/-|frameshift_variant	96.0336014099291	0.047854655524928534	6				NaN	NaN	0	NaN	6130	3084	9215
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9217	26.181	NaN	10369	30	0	1970.2	0.106			+	34651	RVQKPGDL	8	63	456.76665451950015	911.5187561058003	2	456.7664489746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RVQKPGDL_	REV__ENST00000586585.1_1_18:32953773-32954277:-|nuORF	40.77816245573522	0.6514838689002179	6				NaN	NaN	0	NaN	6131	3084	9215
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9218	26.184	NaN	8387	30	0	2849	0.106			+	43393	TGGKQTPPPP	10	73	490.2645063377745	978.514459742349	2	490.264404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TGGKQTPPPP_	REV__DZANK1|p.E450Gfs*16|1|0.3|ENSG00000089091|chr20:18412731-18412732|-/T|frameshift_variant;REV__DZANK1|p.E618Kfs*6|1|0.16|ENSG00000089091|chr20:18390417-18390417|C/-|frameshift_variant;REV__ENSG00000089091|ENST00000699568|DZANK1;REV__nc|ENSG00000089091|Q9NVP4-2|DZANK1;REV__nc|ENSG00000089091|Q9NVP4-3|DZANK1;REV__nc|ENSG00000089091|Q9NVP4-4|DZANK1;REV__nc|ENSG00000089091|Q9NVP4|DZANK1	79.07001860377117	0.20321883041390024	6				NaN	NaN	0	NaN	6132	3084	9215
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9219	26.185	NaN	3518.8	30	0	497.7	0.106			+	17705	IELTRAALY	9	55	350.53782861396905	1048.5916564421073	3	350.5378112792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IELTRAALY_	REV__ENSG00000221978|ENST00000400809|CCNL2;REV__ENST00000480479.5_1_1:1324040-1326370:-|nuORF;REV__ENST00000480646.1_1_1:1324830-1326370:-|nuORF;REV__ENST00000481223.6_1_1:1322613-1326370:-|nuORF;REV__ENST00000482621.5_1_1:1322613-1328165:-|nuORF;REV__ENST00000496007.5_1_1:1324344-1326370:-|nuORF;REV__ENST00000505849.5_1_1:1324040-1326969:-|nuORF;REV__nc|ENSG00000221978|Q96S94-3|CCNL2	25.450171626174864	0.5654022654467333	6				NaN	NaN	0	NaN	6133	3084	9215
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9220	26.187	NaN	3826.7	30	0	584.83	0.106	+			14044	GSHSMRYF	8	68	492.72149011755636	983.4284273019127	2	492.7212829589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GSHSMRYF_	ENSG00000204632|ENST00000360323|HLA-G;ENSG00000206503|ENST00000376809|HLA-A;ENSG00000234745|ENST00000412585|HLA-B;ENST00000487245.5_1_6:31239370-31239763:-|nuORF;ENST00000495183.5_1_6:29910330-29910808:+|nuORF;ENST00000496081.5_1_6:29910330-29912419:+|nuORF;ENST00000498007.1_1_6:31324459-31324935:-|nuORF;HLA-B|p.G124Wfs*15|1|0.18|ENSG00000234745|chr6:31356416-31356417|-/A|frameshift_variant;HLA-B|p.H215Tfs*11|1|0.35|ENSG00000234745|chr6:31355569-31355569|G/-|frameshift_variant;HLA-B|p.P209Qfs*5|6|0.16|ENSG00000234745|chr6:31355586-31355586|G/-|frameshift_variant;HLA-B|p.P81Rfs*70|1|0.56|ENSG00000234745|chr6:31356791-31356791|C/-|frameshift_variant;HLA-B|p.R72Gfs*5|1|0.25|ENSG00000234745|chr6:31356818-31356818|C/-|frameshift_variant;HLA-B|p.V306Afs*13|1|0.49|ENSG00000234745|chr6:31355202-31355202|A/-|frameshift_variant;HLA-B|p.V312Cfs*22|1|0.28|ENSG00000234745|chr6:31355185-31355186|-/A|frameshift_variant;nc|ENSG00000204632|P17693-2|HLA-G;nc|ENSG00000204632|P17693-3|HLA-G;nc|ENSG00000204632|P17693-4|HLA-G;nc|ENSG00000204632|P17693-5|HLA-G;nc|ENSG00000204632|P17693-6|HLA-G;nc|ENSG00000204632|P17693-7|HLA-G;nc|ENSG00000206503|P04439-2|HLA-A	51.33545320467046	0.5859736979383976	6				NaN	NaN	0	NaN	6134	3084	9215
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9221	26.189	NaN	2418.6	30	0	548.15	0.037				-1	SIIISMVSSGL	11	45	374.8743591308594	NaN	0	374.8743591308594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_SIIISM(Oxidation (M))VSSGL_	SLC34A1|p.V171I|1|0.39|ENSG00000131183|chr5:177386545-177386545|G/A|missense_variant	24.231819034082204	0.456735970842152	6				NaN	NaN	0	NaN	6135	3084	9215
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9222	26.19	NaN	4316.6	30	0	554.4	0.143	+			34671	RVSECLRVLK	10	60	401.57290418386447	1201.6968831517934	3	401.5726318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RVSECLRVLK_	ENSG00000158006|ENST00000374282|PAFAH2	42.33807565288922	0.5276008846745733	6				NaN	NaN	0	NaN	6136	3084	9215
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9240	26.228	NaN	55735	30	0	10273	0.185	+			48506	VTNDGATILK	10	87	516.290370375592	1030.566187817984	2	516.2903442382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTNDGATILK_	ENSG00000166226|ENST00000299300|CCT2;ENST00000546859.5_1_12:69979244-69981900:+|nuORF;ENST00000550455.5_1_12:69979244-69981425:+|nuORF;ENST00000550638.5_1_12:69979244-69982049:+|nuORF;ENST00000551620.5_1_12:69979244-69983508:+|nuORF;nc|ENSG00000166226|P78371-2|CCT2	176.59839592901017	0.0015875574101036562	6				NaN	NaN	0	NaN	6151	3087	9239
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9241	26.231	NaN	9891.5	30	0	3732	0.106	+			39424	STDSEVLTHYN	11	57	422.52654009304575	1264.5577908793373	3	422.5264892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STDSEVLTHYN_	ENSG00000139055|ENST00000266397|ERP27	36.31764250033197	0.6083289427130232	6				NaN	NaN	0	NaN	6152	3087	9239
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9242	26.233	NaN	8097.4	30	0	1305.2	0.106	+			18775	ITQEMQTLK	9	75	546.292079889106	1090.569606845012	2	546.2923583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ITQEMQTLK_	ENSG00000104133|ENST00000261866|SPG11;nc|ENSG00000104133|Q96JI7-2|SPG11;nc|ENSG00000104133|Q96JI7-3|SPG11	154.0112374973812	0.005934173778894772	6				NaN	NaN	0	NaN	6153	3087	9239
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9243	26.235	NaN	2914.6	30	0	339.49	0.106	+			24897	LKLVCGSH	8	62	428.74040780129724	855.4662626693945	2	428.740966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LKLVCGSH_	ENSG00000163563|ENST00000368141|MNDA	45.9519527083369	0.6193794311207887	6				NaN	NaN	0	NaN	6154	3087	9239
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9244	26.237	NaN	9662.6	30	0	2118.9	0.106			+	-1	MKTIKCIY	8	51	358.1892740666193	1071.545992800058	3	358.1891784667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))KTIKC(Carbamidomethyl (C))IY_	REV__ENSG00000180998|ENST00000321662|GPR137C	45.9519527083369	0.6193794311207887	6				NaN	NaN	0	NaN	6155	3087	9239
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9245	26.239	NaN	3622.7	30	0	695.49	0.106				-1	 	0	58	469.2298097316941	936.4450665301882	2	469.2296447753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6156	3087	9239
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9246	26.24	NaN	2803.6	30	0	330.9	0.038			+	-1	PCRSAQRPGPA	11	49	399.5368048734768	1195.5885852206304	3	399.53643798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_PC(Carbamidomethyl (C))RSAQRPGPA_	REV__ENST00000334801.7_1_11:118781174-118781492:-|nuORF	19.262678746197807	0.7802940895261122	6				NaN	NaN	0	NaN	6157	3087	9239
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9264	26.275	NaN	58860	30	0	12627	0.214	+			45587	TYNQKHSLF	9	96	379.8611877002372	1136.5617337009116	3	379.8610534667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TYNQKHSLF_	ENSG00000165175|ENST00000614558|MID1IP1	44.116797842482775	0.37197099687881774	6				NaN	NaN	0	NaN	6172	3090	9263
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9265	26.279	NaN	7367.4	30	0	1051.9	0.106	+			26599	LTYARGEEA	9	77	505.2515862468056	1008.4886195604112	2	505.251220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LTYARGEEA_	ENSG00000197119|ENST00000359232|SLC25A29;nc|ENSG00000197119|Q8N8R3-3|SLC25A29	71.29570347882199	0.13518600952103718	6				NaN	NaN	0	NaN	6173	3090	9263
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9266	26.281	NaN	43297	30	0	23152	0.106			+	-1	CHPRNSCSVTN	11	79	444.5248582408782	1330.5527453228347	3	444.52490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))HPRNSC(Carbamidomethyl (C))SVTN_	REV__ENSG00000145777|ENST00000344895|TSLP	35.495647763667336	0.6174708002554854	6				NaN	NaN	0	NaN	6174	3090	9263
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9267	26.282	NaN	5713.8	30	0	598.92	0.106	+			43935	TPAPPTHAL	9	63	452.7479092331561	903.4812655331123	2	452.7478332519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TPAPPTHAL_	ENSG00000165684|ENST00000684778|SNAPC4;SNAPC4|p.E1230Gfs*16|1|0.21|ENSG00000165684|chr9:136378131-136378138|CCTGGGCT/-|frameshift_variant	65.80317337860623	0.1652391959156183	6				NaN	NaN	0	NaN	6175	3090	9263
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9268	26.284	NaN	6254.3	30	0	741.2	0.106	+			18912	IVMNLPNV	8	56	450.2533446176351	898.4921363020702	2	450.25433349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IVMNLPNV_	CCDC88C|p.K1383Sfs*29|1|0.08|ENSG00000015133|chr14:91291049-91291049|T/-|frameshift_variant;ENSG00000015133|ENST00000389857|CCDC88C;ENST00000553437.1_1_14:91808648-91875041:-|nuORF	44.53106598305862	0.628196326904373	6				NaN	NaN	0	NaN	6176	3090	9263
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9269	26.286	NaN	6975.6	30	0	731.53	0.037	+			45589	TYNQKHSLF	9	72	569.2879995113125	1136.5614460894249	2	569.2890014648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TYNQKHSLF_	ENSG00000165175|ENST00000614558|MID1IP1	122.1759843771914	0.019882474861609503	6				NaN	NaN	0	NaN	6177	3090	9263
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9270	26.287	NaN	1226.7	30	0	91.706	0.141			+	-1	SCLSFLLLL	9	60	554.31150110591	1106.60844927862	2	554.3124389648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))SC(Carbamidomethyl (C))LSFLLLL_	REV__CHRNA1|p.I123Ffs*67|2|0.31|ENSG00000138435|chr2:174757618-174757618|T/-|frameshift_variant;REV__CHRNA1|p.W4C|1|0.16|ENSG00000138435|chr2:174764383-174764383|C/A|missense_variant;REV__ENSG00000138435|ENST00000348749|CHRNA1;REV__nc|ENSG00000138435|P02708-1|CHRNA1	47.91560031466742	0.327412564698279	6				NaN	NaN	0	NaN	6178	3090	9263
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9288	26.325	NaN	52263	30	0	10187	0.215	+			2470	APLKSKMIY	9	93	525.8042847039411	1049.5940164746821	2	525.8047485351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_APLKSKMIY_	ENSG00000125868|ENST00000246069|DSTN;ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65623104-65623215:-|nuORF;ENST00000602547.1_1_12:6994092-6994545:+|nuORF;nc|ENSG00000125868|P60981-2|DSTN;nc|ENSG00000165410|Q9Y281-3|CFL2	120.8684288430529	0.02067403653475984	6				NaN	NaN	0	NaN	6193	3093	9287
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9289	26.329	NaN	9837.7	30	0	908.46	0.106	+			35583	SAYGSVKAY	9	75	473.23756533140045	944.4605777296009	2	473.2372131347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAYGSVKAY_	ENSG00000182718|ENST00000451270|ANXA2;ENST00000557937.5_1_15:60655071-60678274:-|nuORF;nc|ENSG00000182718|P07355-2|ANXA2;nc|ENSG00000231991|A6NMY6|ANXA2P2;NPTN-ANXA2|1|fusion	96.0336014099291	0.047854655524928534	6				NaN	NaN	0	NaN	6194	3093	9287
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9290	26.331	NaN	17484	30	0	5423.9	0.106			+	-1	HYMGRMCSSPF	11	68	449.8471303918478	1346.5195617757436	3	449.8473205566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Oxidation (M)	_HYM(Oxidation (M))GRM(Oxidation (M))CSSPF_	REV__ENST00000489298.1_1_X:55172566-55172653:-|nuORF	25.125986553469783	0.7262400895305658	6				NaN	NaN	0	NaN	6195	3093	9287
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9291	26.333	NaN	4927.6	30	0	807.03	0.106				-1	KMRKQMQK	8	74	547.3034109883978	1092.5922690435955	2	547.3038330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_KM(Oxidation (M))RKQMQK_	ENSG00000056097|ENST00000265069|ZFR	57.81127852772723	0.5234495074909924	6				NaN	NaN	0	NaN	6196	3093	9287
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9292	26.334	NaN	5293.9	30	0	721.09	0.106	+			20471	KEVVHTVSL	9	65	506.2954025345505	1010.576252135901	2	506.295166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEVVHTVSL_	ENSG00000183207|ENST00000595090|RUVBL2;ENST00000596247.5_1_19:49507512-49519096:+|nuORF;nc|ENSG00000183207|Q9Y230-2|RUVBL2	95.81516180277367	0.04847050768394289	6				NaN	NaN	0	NaN	6197	3093	9287
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9293	26.336	NaN	5994.5	30	0	815.66	0.036	+			19917	KEFDKEVKS	9	70	555.2953790882333	1108.5762052432665	2	555.2958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KEFDKEVKS_	ENSG00000163689|ENST00000482387|CFAP20DC;ENST00000472469.5_2_3:58870372-59035390:-|nuORF;ENST00000491845.5_2_3:58978268-59035690:-|nuORF	78.26377905018397	0.10505600812668463	6				NaN	NaN	0	NaN	6198	3093	9287
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9294	26.337	NaN	17494	30	0	2972.9	0.14	+			41452	SVNLTAPQGA	10	69	479.2535593907285	956.4925658482571	2	479.2532958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVNLTAPQGA_	ENST00000374165.5_1_9:116172982-116173105:+|nuORF	85.86182877749512	0.1547657473298402	6				NaN	NaN	0	NaN	6199	3093	9287
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9312	26.376	NaN	25052	30	0	8483.7	0.214	+			4332	ATGLSGLTK	9	77	424.24780761539955	846.4810622975991	2	424.2476806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATGLSGLTK_	ENSG00000165949|ENST00000612813|IFI27;nc|ENSG00000165949|P40305-1|IFI27;nc|ENSG00000165949|P40305-3|IFI27;nc|ENSG00000165949|P40305-4|IFI27	154.1183686248401	0.005909203230691971	6				NaN	NaN	0	NaN	6214	3096	9311
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9313	26.38	NaN	14213	30	0	4289.7	0.106	+			14257	GSSYPVCVSK	10	69	513.7496715286386	1025.484790124077	2	513.7499389648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSSYPVCVSK_	ENSG00000089127|ENST00000202917|OAS1;ENST00000549820.1_1_12:113344820-113354315:+|nuORF;nc|ENSG00000089127|P00973-2|OAS1;nc|ENSG00000089127|P00973-3|OAS1;nc|ENSG00000089127|P00973-4|OAS1;OAS1|p.N280Tfs*8|1|0.07|ENSG00000089127|chr12:112916689-112916689|A/-|frameshift_variant	72.2432373244024	0.2589930451692646	6				NaN	NaN	0	NaN	6215	3096	9311
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9314	26.382	NaN	7225	30	0	2412.3	0.106	+			14983	GTMTGMLYK	9	65	509.24048900309253	1016.4664250729851	2	509.2408752441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_GTM(Oxidation (M))TGMLYK_	ENSG00000178440|ENST00000651763|TIMM23B-AGAP6;ENSG00000204152|ENST00000651259|TIMM23B;ENSG00000265354|ENST00000580018|TIMM23;nc|ENSG00000204152|Q5SRD1-2|TIMM23B	131.03138772384656	0.014687601201650916	6				NaN	NaN	0	NaN	6216	3096	9311
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9315	26.384	NaN	10225	30	0	3039.8	0.106	+			5500	AVADSVLTK	9	70	452.26071344814375	902.5068739630875	2	452.2604675292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVADSVLTK_	ENSG00000173821|ENST00000582970|RNF213;ENST00000559070.5_1_17:78261823-78310301:+|nuORF;nc|ENSG00000173821|Q63HN8-4|RNF213;nc|ENSG00000173821|Q63HN8|RNF213;RNF213|p.C5022Lfs*7|1|0.3|ENSG00000173821|chr17:80389237-80389237|G/-|frameshift_variant;RNF213|p.P2167Lfs*64|1|0.09|ENSG00000173821|chr17:80344834-80344835|-/T|frameshift_variant;RNF213|p.Q1953Rfs*50|2|0.13|ENSG00000173821|chr17:80340219-80340219|C/-|frameshift_variant	82.7504851949679	0.08565546331141553	6				NaN	NaN	0	NaN	6217	3096	9311
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9316	26.386	NaN	5971.3	30	0	2527	0.106	+			42488	TANDRILKY	9	56	365.2048138371167	1092.5926121115501	3	365.2047119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TANDRILKY_	ENSG00000100271|ENST00000266254|TTLL1;nc|ENSG00000100271|O95922-4|TTLL1	31.954861631926434	0.5046124803899898	6				NaN	NaN	0	NaN	6218	3096	9311
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9317	26.388	NaN	11389	30	0	2619.9	0.04	+			44897	TTYKYEMINK	10	77	430.88457919208406	NaN	0	430.8846435546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TTYKYEMINK_	ENSG00000100129|ENST00000652021|EIF3L;ENST00000457262.1_1_10:43062145-43062928:+|nuORF;ENST00000495197.1_1_10:38368986-38369799:-|nuORF;nc|ENSG00000100129|Q9Y262-2|EIF3L	45.908116695636124	0.331471961372572	6				NaN	NaN	0	NaN	6219	3096	9311
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9318	26.388	NaN	6406.8	30	0	1727.6	0.142			+	9193	EGQQQVLLSR	10	48	386.5467435396321	1156.6184012190963	3	386.54632568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EGQQQVLLSR_	REV__ENSG00000233757|ENST00000425953|ZNF892	32.81241826257853	0.6118718159329168	6				NaN	NaN	0	NaN	6220	3096	9311
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9336	26.428	NaN	48082	30	0	14523	0.214	+			2736	AQYQFTGIKK	10	91	395.2207684771709	1182.6404760317128	3	395.220458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AQYQFTGIKK_	ENSG00000173915|ENST00000369815|ATP5MK	115.23196543181992	0.034063879665207575	6				NaN	NaN	0	NaN	6235	3099	9335
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9337	26.431	NaN	6490.9	30	0	1692.3	0.106	+			3594	ASVKAIFSK	9	76	475.78701682210954	949.5594807110191	2	475.786865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASVKAIFSK_	ENSG00000083642|ENST00000315596|PDS5B;nc|ENSG00000083642|Q9NTI5-2|PDS5B;PDS5B|p.G721Dfs*35|1|0.13|ENSG00000083642|chr13:32732132-32732132|A/-|frameshift_variant;PDS5B|p.K1268Rfs*8|1|0.07|ENSG00000083642|chr13:32770296-32770296|A/-|frameshift_variant;PDS5B|p.K1287Rfs*22|1|0.26|ENSG00000083642|chr13:32770351-32770351|A/-|frameshift_variant;PDS5B|p.K693Qfs*8|1|0.11|ENSG00000083642|chr13:32710054-32710055|-/T|frameshift_variant;PDS5B|p.N1390Cfs*12|1|0.44|ENSG00000083642|chr13:32770750-32770751|AA/-|frameshift_variant;PDS5B|p.S1198Vfs*10|1|0.28|ENSG00000083642|chr13:32764556-32764556|A/-|frameshift_variant	99.01295224348159	0.040209060045561164	6				NaN	NaN	0	NaN	6236	3099	9335
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9338	26.433	NaN	5041.2	30	0	757.21	0.106	+			23003	KVSGDIFSR	9	65	504.77721978657235	1007.5398866399447	2	504.7773742675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KVSGDIFSR_	ENSG00000181404|ENST00000696149|WASHC1;ENST00000400706.3_1_12:78799-87272:+|nuORF;ENST00000488147.1_1_1:18362-24778:-|nuORF;ENST00000557932.5_1_15:102506277-102513446:+|nuORF;ENST00000558686.5_1_15:102506217-102512799:+|nuORF;nc|ENSG00000185596|C4AMC7|WASH3P;nc|ENSG00000291134|Q6VEQ5|WASH2P	74.1650062923329	0.12277912660386392	6				NaN	NaN	0	NaN	6237	3099	9335
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9339	26.435	NaN	3421.1	30	0	699.59	0.106	+			575	ADIKIHGM	8	66	442.7366268707932	883.4587008083864	2	442.73638916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ADIKIHGM_	ENSG00000129003|ENST00000644861|VPS13C;nc|ENSG00000129003|Q709C8-2|VPS13C;nc|ENSG00000129003|Q709C8-3|VPS13C;nc|ENSG00000129003|Q709C8-4|VPS13C;VPS13C|p.E2463Nfs*18|1|0.25|ENSG00000129003|chr15:61920157-61920157|C/-|frameshift_variant;VPS13C|p.N3163Sfs*6|1|0.05|ENSG00000129003|chr15:61882732-61882733|-/TTATCATCAC|frameshift_variant;VPS13C|p.P3597Lfs*3|1|0.26|ENSG00000129003|chr15:61868732-61868732|G/-|frameshift_variant	44.116797842482775	0.6307669463330267	6				NaN	NaN	0	NaN	6238	3099	9335
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9340	26.437	NaN	4273.7	30	0	476.33	0.106			+	50348	WVHGNMSF	8	61	489.21968620497904	976.4248194767581	2	489.2196350097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_WVHGNMSF_	REV__tr|U7T3Q2|U7T3Q2_FUSNUCopperamineoxidaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00213PE=4SV=1	44.53106598305862	0.628196326904373	6				NaN	NaN	0	NaN	6239	3099	9335
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9341	26.439	NaN	17791	30	0	7631.2	0.04	+			49283	VVQERESLLVK	11	76	433.9258367513454	1298.7556808542363	3	433.9258728027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VVQERESLLVK_	ENSG00000096696|ENST00000379802|DSP;nc|ENSG00000096696|P15924-2|DSP;nc|ENSG00000096696|P15924-3|DSP	37.59989570853033	0.5907838038483115	6				NaN	NaN	0	NaN	6240	3099	9335
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9342	26.44	NaN	15723	30	0	2958.4	0.139	+			35089	SAFSTSISK	9	75	464.24264273852964	926.4707325438593	2	464.2424621582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SAFSTSISK_	ENSG00000179115|ENST00000314606|FARSA;ENST00000592662.5_1_19:13039347-13044510:-|nuORF	88.17693792209575	0.07000514020414955	6				NaN	NaN	0	NaN	6241	3099	9335
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9360	26.479	NaN	24192	30	0	4554.9	0.214	+			33183	REVEARYAL	9	85	553.8011737514355	1105.587794569671	2	553.8016357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_REVEARYAL_	ENSG00000111057|ENST00000388835|KRT18;ENST00000411618.1_1_9:30799684-30799825:-|nuORF;ENST00000549078.5_1_12:53344429-53346127:+|nuORF	75.04331003522576	0.118981335847003	6				NaN	NaN	0	NaN	6256	3102	9359
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9361	26.483	NaN	18430	30	0	3177.2	0.106	+			679	AEAKEKIYL	9	79	532.8029959077311	1063.591438882262	2	532.8031616210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEAKEKIYL_	ENSG00000133706|ENST00000394434|LARS1;ENST00000508667.5_1_5:145522961-145531505:-|nuORF;nc|ENSG00000133706|Q9P2J5-2|LARS1	87.69643885390035	0.07135982304947239	6				NaN	NaN	0	NaN	6257	3102	9359
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9362	26.485	NaN	17487	30	0	7078.1	0.106	+			31051	QEVVDGKVV	9	83	486.7716341254726	971.5287153177452	2	486.7713317871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QEVVDGKVV_	CON__P35900;ENSG00000171431|ENST00000167588|KRT20;KRT20|p.V404M|1|0.22|ENSG00000171431|chr17:40876426-40876426|C/T|missense_variant	114.8945686534367	0.024290463251177924	6				NaN	NaN	0	NaN	6258	3102	9359
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9363	26.486	NaN	31319	30	0	4790.9	0.106	+			22738	KVAVVLIQK	9	83	499.3422483721269	996.6699438110538	2	499.3417053222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KVAVVLIQK_	ENSG00000168538|ENST00000334690|TRAPPC11;ENST00000509857.5_1_4:184585182-184595983:+|nuORF;nc|ENSG00000168538|Q7Z392-3|TRAPPC11;nc|ENSG00000168538|Q7Z392-4|TRAPPC11;TRAPPC11|p.T366Pfs*9|1|0.25|ENSG00000168538|chr4:183680246-183680246|A/-|frameshift_variant	129.42129120953632	0.01549634589885217	6				NaN	NaN	0	NaN	6259	3102	9359
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9364	26.488	NaN	14567	30	0	4153.8	0.106	+			40600	SVAGLSVTK	9	70	431.2559184306007	860.4972839280014	2	431.2554626464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVAGLSVTK_	ENSG00000197841|ENST00000492450|ZNF181;ZNF181|p.K248Sfs*36|1|0.29|ENSG00000197841|chr19:34741122-34741125|CAAA/-|frameshift_variant;ZNF181|p.V107Lfs*2|1|0.15|ENSG00000197841|chr19:34740695-34740695|A/-|frameshift_variant;ZNF181|p.Y52H|1|0.07|ENSG00000197841|chr19:34739546-34739546|T/C|missense_variant	63.53385203322761	0.18415635464017938	6				NaN	NaN	0	NaN	6260	3102	9359
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9365	26.49	NaN	12516	30	0	2458.9	0.034	+			4220	ATGDALLEK	9	74	459.2504917800491	916.4864306268983	2	459.25018310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATGDALLEK_	ENSG00000108679|ENST00000262776|LGALS3BP;ENST00000586720.5_1_17:76967660-76975958:-|nuORF;ENST00000587251.5_1_17:76967660-76972124:-|nuORF	91.26522074875469	0.06129826844580791	6				NaN	NaN	0	NaN	6261	3102	9359
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9366	26.491	NaN	13767	30	0	3449.5	0.142	+			34862	RYSTQIHSF	9	81	569.7854005494062	1137.5562481656123	2	569.7861938476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RYSTQIHSF_	ENSG00000180535|ENST00000609256|BHLHA15	65.15724298150197	0.17062369902793603	6				NaN	NaN	0	NaN	6262	3102	9359
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9384	26.529	NaN	13560	30	0	3006.7	0.214	+			42893	TEHEKVAIL	9	65	520.2929068837971	1038.571260834394	2	520.2930908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEHEKVAIL_	ENSG00000142039|ENST00000269967|CCDC97	54.722347961057174	0.257609425301511	6				NaN	NaN	0	NaN	6277	3105	9383
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9385	26.533	NaN	10022	30	0	2393.6	0.106	+			43149	TESPVRTL	8	80	451.75107116612264	901.4875893990453	2	451.7508544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TESPVRTL_	ENSG00000134285|ENST00000550765|FKBP11;ENST00000551694.5_1_12:49318004-49319277:-|nuORF;ENST00000553027.1_1_12:49319073-49319295:-|nuORF;nc|ENSG00000134285|Q9NYL4-2|FKBP11	41.42661286455405	0.6474601000989023	6				NaN	NaN	0	NaN	6278	3105	9383
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9386	26.535	NaN	6412.8	30	0	823.02	0.106	+			38047	SPQPDGKVVY	10	69	545.2825961461078	1088.5506393590156	2	545.2830200195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SPQPDGKVVY_	ENSG00000170892|ENST00000396388|TSEN34	85.86182877749512	0.1547657473298402	6				NaN	NaN	0	NaN	6279	3105	9383
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9387	26.537	NaN	6015	30	0	990.71	0.106			+	21952	KSANRTPI	8	64	443.7593195621211	885.5040861910422	2	443.758544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KSANRTPI_	REV__ENSG00000188694|ENST00000340345|KRTAP24-1	33.51558372728122	0.7005509609380386	6				NaN	NaN	0	NaN	6280	3105	9383
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9388	26.538	NaN	2989.7	30	0	405.6	0.106	+			24217	LERQIEKL	8	71	514.8087944106992	1027.6030358881983	2	514.8089599609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LERQIEKL_	BAZ2A|p.K1507Qfs*26|1|0.27|ENSG00000076108|chr12:56600770-56600771|-/G|frameshift_variant;ENSG00000076108|ENST00000549884|BAZ2A;nc|ENSG00000076108|Q9UIF9-2|BAZ2A;nc|ENSG00000076108|Q9UIF9-3|BAZ2A;nc|ENSG00000076108|Q9UIF9|BAZ2A	36.446750945000026	0.6783611724927969	6				NaN	NaN	0	NaN	6281	3105	9383
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9389	26.54	NaN	2859.9	30	0	358.78	0.034			+	26302	LSVIQPTSV	9	65	472.27644431988483	942.5383357065697	2	472.2765197753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSVIQPTSV_	REV__E2F8|p.T831Ifs*21|1|0.05|ENSG00000129173|chr11:19224770-19224771|-/TTTAA|frameshift_variant;REV__ENSG00000129173|ENST00000250024|E2F8	71.87747018426188	0.13267044672804276	6				NaN	NaN	0	NaN	6282	3105	9383
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9390	26.541	NaN	4754.2	30	0	674.85	0.139			+	-1	PISSHLSPM	9	69	492.74451089316136	983.4744688531227	2	492.7444152832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_PISSHLSPM(Oxidation (M))_	REV__ENST00000465250.6_1_19:16742403-16758047:-|nuORF;REV__ENST00000593404.5_1_19:16757515-16758047:-|nuORF;REV__ENST00000593991.5_3_19:16741295-16758047:-|nuORF;REV__ENST00000594662.5_1_19:16742403-16758047:-|nuORF;REV__ENST00000598278.5_1_19:16742403-16758047:-|nuORF;REV__ENST00000599310.5_1_19:16757515-16758047:-|nuORF;REV__ENST00000600705.1_3_19:16688878-16758047:-|nuORF	37.15910966729921	0.4535818937225704	6				NaN	NaN	0	NaN	6283	3105	9383
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9408	26.58	NaN	23892	30	0	9202.4	0.214	+			40186	STQTALTLK	9	80	481.7787471354299	961.5429413376598	2	481.77923583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STQTALTLK_	ENSG00000172123|ENST00000304905|SLFN12;SLFN12|p.V491Cfs*4|1|0.28|ENSG00000172123|chr17:35411605-35411605|T/-|frameshift_variant	169.6522961985778	0.0028262690464207238	6				NaN	NaN	0	NaN	6298	3108	9407
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9409	26.584	NaN	7744.4	30	0	2628.4	0.106	+			31033	QEVAIKQM	8	66	473.75467584776777	945.4947987623356	2	473.75445556640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QEVAIKQM_	ENSG00000077264|ENST00000372007|PAK3;ENSG00000149269|ENST00000356341|PAK1;nc|ENSG00000077264|O75914-3|PAK3;nc|ENSG00000077264|O75914-4|PAK3;nc|ENSG00000077264|O75914|PAK3;nc|ENSG00000149269|Q13153-2|PAK1	138.8255168832474	0.2537552148063804	6				NaN	NaN	0	NaN	6299	3108	9407
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9410	26.586	NaN	4839.5	30	0	648.25	0.106			+	9476	EKRELEKL	8	68	522.8063407893682	1043.5981286455362	2	522.8065185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EKRELEKL_	REV__ENSG00000048707|ENST00000620676|VPS13D;REV__nc|ENSG00000048707|Q5THJ4-2|VPS13D;REV__VPS13D|p.K3964Nfs*34|1|0.09|ENSG00000048707|chr1:12403831-12403831|A/-|frameshift_variant	74.25504064058377	0.37144338840759816	6				NaN	NaN	0	NaN	6300	3108	9407
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9411	26.588	NaN	2037.7	30	0	245.35	0.106	+			33185	REVEIQSHL	9	57	555.7986370519234	1109.5827211706467	2	555.7991333007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_REVEIQSHL_	chr20:56390665-56392154|451|11.2|0.64|4.13|-|ENST00000441357|AURKA,AURKA;ENSG00000087586|ENST00000395915|AURKA	85.86182877749512	0.07653218437724067	6				NaN	NaN	0	NaN	6301	3108	9407
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9412	26.59	NaN	1540	30	0	128.69	0.106	+			33585	RLLPGNATISK	11	62	585.3538930142655	1168.693233095331	2	585.3543090820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RLLPGNATISK_	ENSG00000173193|ENST00000474629|PARP14;nc|ENSG00000173193|Q460N5-1|PARP14;nc|ENSG00000173193|Q460N5-3|PARP14;nc|ENSG00000173193|Q460N5-4|PARP14;PARP14|p.N1416Efs*19|1|0.2|ENSG00000173193|chr3:122718388-122718389|-/A|frameshift_variant	77.53327743719008	0.17293716712445248	6				NaN	NaN	0	NaN	6302	3108	9407
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9413	26.591	NaN	5352.5	30	0	1187.3	0.035	+			16674	HILRPGTAL	9	65	489.29832339479805	976.5820938563961	2	489.2980041503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HILRPGTAL_	ENSG00000261150|ENST00000615648|EPPK1;EPPK1|p.G2015Vfs*36|2|0.33|ENSG00000261150|chr8:143867210-143867210|C/-|frameshift_variant	51.52775601994872	0.28504342437107444	6				NaN	NaN	0	NaN	6303	3108	9407
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9414	26.592	NaN	968.78	30	0	68.048	0.142			+	16555	HEYKDGPKQ	9	46	551.2700889406918	1100.5256249481836	2	551.2705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HEYKDGPKQ_	REV__ENSG00000009830|ENST00000261534|POMT2;REV__ENST00000452340.7_1_14:77746025-77787024:-|nuORF;REV__ENST00000555788.5_1_14:77772649-77778351:-|nuORF;REV__ENST00000556880.5_1_14:77772649-77773022:-|nuORF	37.81151784470057	0.4459294069877048	6				NaN	NaN	0	NaN	6304	3108	9407
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9432	26.63	NaN	23703	30	0	11648	0.214	+			31324	QIQDSIVTK	9	75	516.2906817773995	1030.566810621599	2	516.290283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QIQDSIVTK_	ENSG00000180855|ENST00000301547|ZNF443;ENSG00000196466|ENST00000430385|ZNF799;nc|ENSG00000196466|Q96GE5-2|ZNF799;ZNF443|p.W208Gfs*34|1|0.3|ENSG00000180855|chr19:12431550-12431550|A/-|frameshift_variant	106.68306549817024	0.032382560583716295	6				NaN	NaN	0	NaN	6319	3111	9431
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9433	26.634	NaN	31207	30	0	5357.4	0.106				-1	 	0	62	372.8456976831552	1115.5152636496657	3	372.845458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6320	3111	9431
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9434	26.636	NaN	10682	30	0	3173.2	0.106	+			44754	TTMTGTVLK	9	74	476.262162516694	950.509772100188	2	476.26226806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TTMTGTVLK_	ENSG00000167323|ENST00000526596|STIM1;ENST00000533445.1_1_11:4076769-4103426:+|nuORF;nc|ENSG00000167323|Q13586-2|STIM1;nc|ENSG00000167323|Q13586|STIM1	79.71258880314673	0.09879134589249085	6				NaN	NaN	0	NaN	6321	3111	9431
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9435	26.637	NaN	8283.9	30	0	1295.3	0.106	+			15135	GTSDRFSRILK	11	54	427.24243919280553	1278.7054881786166	3	427.2419738769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTSDRFSRILK_	ENSG00000014138|ENST00000265465|POLA2;ENST00000527850.5_1_11:65029833-65063521:+|nuORF;ENST00000534785.1_1_11:65061654-65063444:+|nuORF;nc|ENSG00000014138|Q14181-2|POLA2	36.527901853580055	0.6054519527965578	6				NaN	NaN	0	NaN	6322	3111	9431
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9436	26.639	NaN	5006.2	30	0	1428.5	0.106			+	47361	VPESSVLSPA	10	71	493.2635107964727	984.5124686597454	2	493.2633361816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VPESSVLSPA_	REV__ENST00000434116.6_1_15:65903875-65903989:+|nuORF	58.78195531508484	0.37691818691852547	6				NaN	NaN	0	NaN	6323	3111	9431
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9437	26.641	NaN	3914.2	30	0	609.92	0.034	+			19766	KEAEKVLR	8	69	486.7951757595836	971.5757985859673	2	486.7951965332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KEAEKVLR_	ENST00000466929.5_1_9:95858543-95872895:+|nuORF;ENST00000495641.5_1_9:95858537-95872895:+|nuORF	39.252832667884924	0.6609488554722044	6				NaN	NaN	0	NaN	6324	3111	9431
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9438	26.642	NaN	5842.8	30	0	1977.8	0.145	+			20071	KEKEYEIERL	10	64	446.2417968543949	1335.7035611633848	3	446.24139404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KEKEYEIERL_	ENSG00000096696|ENST00000379802|DSP;nc|ENSG00000096696|P15924-2|DSP;nc|ENSG00000096696|P15924-3|DSP	31.068146907933308	0.6261162406294317	6				NaN	NaN	0	NaN	6325	3111	9431
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9456	26.681	NaN	17019	30	0	4929.4	0.214	+			5035	ATSEIFASK	9	75	477.2511189611406	952.4876849890812	2	477.2507019042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSEIFASK_	ENSG00000005810|ENST00000544440|MYCBP2;MYCBP2|p.C1064Ifs*31|1|0.09|ENSG00000005810|chr13:77211267-77211279|TTATCAGAAGGCA/-|frameshift_variant;MYCBP2|p.N1867Tfs*9|1|0.15|ENSG00000005810|chr13:77171572-77171572|T/-|frameshift_variant;MYCBP2|p.N3049*|1|0.11|ENSG00000005810|chr13:77097894-77097895|TT/-|frameshift_variant;MYCBP2|p.P4047Qfs*26|2|0.35|ENSG00000005810|chr13:77067782-77067782|G/-|frameshift_variant;MYCBP2|p.T1507Ffs*24|1|0.04|ENSG00000005810|chr13:77185189-77185190|-/TTGTAAA|frameshift_variant;MYCBP2|p.T4311Pfs*37|1|0.14|ENSG00000005810|chr13:77059619-77059619|G/-|frameshift_variant;MYCBP2|p.V3749*|1|0.12|ENSG00000005810|chr13:77081486-77081486|C/-|frameshift_variant;nc|ENSG00000005810|O75592-2|MYCBP2	123.20810148215591	0.019257656778428764	6				NaN	NaN	0	NaN	6340	3114	9455
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9457	26.685	NaN	5687.5	30	0	1895	0.106			+	25460	LPQLGSPH	8	60	424.7350594796406	847.4555660260812	2	424.7350158691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LPQLGSPH_	REV__TLE4|p.P158L|1|0.27|ENSG00000106829|chr9:79652675-79652675|C/T|missense_variant	82.30502934623384	0.30436709589983096	6				NaN	NaN	0	NaN	6341	3114	9455
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9458	26.687	NaN	1777.9	30	0	832.66	0.106	+			48844	VVAVLLTKK	9	30	324.2267795253457	969.6585091762372	3	324.2267761230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVAVLLTKK_	ENSG00000169710|ENST00000306749|FASN;FASN|p.A413Hfs*39|2|0.47|ENSG00000169710|chr17:82091478-82091478|G/-|frameshift_variant	29.14955571784316	0.5308295550522326	6				NaN	NaN	0	NaN	6342	3114	9455
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9459	26.689	NaN	3760.4	30	0	800.39	0.106			+	24606	LGRLGPLH	8	52	431.7665937906184	861.5186346480368	2	431.7666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LGRLGPLH_	REV__ENST00000397901.7_1_16:89712038-89712440:-|nuORF	39.021493756699265	0.6623843612266921	6				NaN	NaN	0	NaN	6343	3114	9455
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9460	26.69	NaN	17789	30	0	1747.1	0.106	+			42375	TAINASRAL	9	73	458.76438811175166	915.5142232903033	2	458.7642517089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TAINASRAL_	ENSG00000174373|ENST00000680220|RALGAPA1;ENST00000443361.1_1_9:108287470-108288637:+|nuORF;nc|ENSG00000174373|Q6GYQ0-2|RALGAPA1;nc|ENSG00000174373|Q6GYQ0-5|RALGAPA1;nc|ENSG00000174373|Q6GYQ0-6|RALGAPA1;nc|ENSG00000174373|Q6GYQ0-7|RALGAPA1;nc|ENSG00000174373|Q6GYQ0|RALGAPA1	123.20810148215591	0.019257656778428764	6				NaN	NaN	0	NaN	6344	3114	9455
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9461	26.692	NaN	6011.5	30	0	578.62	0.034			+	-1	KNYAMVDL	8	67	485.2389909560216	968.4634289788432	2	485.2389831542969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_KNYAM(Oxidation (M))VDL_	REV__ENSG00000213614|ENST00000268097|HEXA;REV__ENST00000568777.5_1_15:72638642-72646100:-|nuORF	40.5726180659479	0.6527593143185008	6				NaN	NaN	0	NaN	6345	3114	9455
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9462	26.693	NaN	10193	30	0	1041.3	0.142	+			8116	DYMKTTSNF	9	72	561.7420996234814	1121.4696463137627	2	561.7431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_DYM(Oxidation (M))KTTSNF_	ENSG00000165525|ENST00000298310|NEMF;nc|ENSG00000165525|O60524-3|NEMF;nc|ENSG00000165525|O60524-4|NEMF;NEMF|p.K641Rfs*9|1|0.15|ENSG00000165525|chr14:49802721-49802721|T/-|frameshift_variant;NEMF|p.M879*|1|0.12|ENSG00000165525|chr14:49789558-49789558|T/-|frameshift_variant;NEMF|p.M879Nfs*10|1|0.13|ENSG00000165525|chr14:49789557-49789558|-/T|frameshift_variant	185.71840793949184	0.0007219834064317508	6				NaN	NaN	0	NaN	6346	3114	9455
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9480	26.732	NaN	42628	30	0	4783.8	0.214	+			50513	YANSKAVTL	9	90	483.7666732506529	965.5187935681058	2	483.76611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YANSKAVTL_	ENSG00000164091|ENST00000296490|WDR82;ENST00000487402.1_1_3:52291508-52301068:-|nuORF	168.25843898104137	0.0030641937004078144	6				NaN	NaN	0	NaN	6361	3117	9479
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9481	26.736	NaN	9056.2	30	0	1575.7	0.106	+			41698	SVSDLAPPR	9	59	471.25585135475825	940.4971497763165	2	471.2557373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVSDLAPPR_	ENSG00000166295|ENST00000299381|ANAPC16	113.41158876095287	0.025516849225023126	6				NaN	NaN	0	NaN	6362	3117	9479
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9482	26.738	NaN	4935.7	30	0	520.03	0.106			+	21379	KMITSVMSR	9	66	526.7829505419584	1051.5513481507166	2	526.7832641601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KMITSVMSR_	REV__BIRC6|p.K3585Sfs*8|1|0.32|ENSG00000115760|chr2:32515171-32515171|A/-|frameshift_variant;REV__BIRC6|p.S3504Mfs*5|1|0.15|ENSG00000115760|chr2:32513095-32513098|TAGT/-|frameshift_variant;REV__ENSG00000115760|ENST00000421745|BIRC6;REV__ENST00000497023.1_1_2:32727936-32730277:+|nuORF	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	6363	3117	9479
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9483	26.74	NaN	5953.3	30	0	1576.7	0.106	+			8546	EAVKPTVGM	9	68	466.2497301674248	930.4849074016496	2	466.24920654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EAVKPTVGM_	ENSG00000164323|ENST00000458385|CFAP97	63.30626980617807	0.18605348971131092	6				NaN	NaN	0	NaN	6364	3117	9479
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9484	26.741	NaN	3361.1	30	0	1112.9	0.106	+			14984	GTMTGMLYK	9	65	509.24048900309253	1016.4664250729851	2	509.24053955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_GTM(Oxidation (M))TGMLYK_	ENSG00000178440|ENST00000651763|TIMM23B-AGAP6;ENSG00000204152|ENST00000651259|TIMM23B;ENSG00000265354|ENST00000580018|TIMM23;nc|ENSG00000204152|Q5SRD1-2|TIMM23B	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	6365	3117	9479
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9485	26.743	NaN	3818.8	30	0	1178.8	0.034			+	30942	QELQLQLS	8	57	479.763853990209	NaN	0	479.7635498046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QELQLQLS_	REV__MYO15A|p.T3490S|1|0.6|ENSG00000091536|chr17:18173899-18173899|C/G|missense_variant	66.96192283764107	1.7418937515398478	6				NaN	NaN	0	NaN	6366	3117	9479
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9486	26.744	NaN	4248.4	30	0	497.94	0.142			+	-1	RMRLMEMR	8	67	569.7854005494062	1137.5562481656123	2	570.2838745117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_RMRLM(Oxidation (M))EMR_	REV__ENST00000558461.1_1_15:49309175-49309800:-|nuORF	30.503639358989545	0.7238069182250283	6				NaN	NaN	0	NaN	6367	3117	9479
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9504	26.782	NaN	38406	30	0	8487.3	0.214	+			29324	NYQNVVHKL	9	76	372.20515729804197	1113.5936424943259	3	372.20513916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NYQNVVHKL_	ENSG00000146463|ENST00000314607|ZMYM4;nc|ENSG00000146463|Q5VZL5-2|ZMYM4;nc|ENSG00000146463|Q5VZL5-3|ZMYM4;nc|ENSG00000146463|Q5VZL5-4|ZMYM4;ZMYM4|p.A956Sfs*68|1|0.38|ENSG00000146463|chr1:35393690-35393691|-/A|frameshift_variant;ZMYM4|p.D1229Ifs*2|1|0.12|ENSG00000146463|chr1:35405175-35405175|G/-|frameshift_variant;ZMYM4|p.N1222Kfs*15|1|0.25|ENSG00000146463|chr1:35405154-35405155|-/A|frameshift_variant;ZMYM4|p.Y806Ifs*12|1|0.16|ENSG00000146463|chr1:35389058-35389059|-/A|frameshift_variant	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	6382	3120	9503
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9505	26.785	NaN	50700	30	0	27746	0.106	+			30848	QEGAKMAVRL	10	65	368.20625850365815	1101.5969461111745	3	368.2061767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QEGAKMAVRL_	CTNNB1|p.L301Hfs*16|1|0.05|ENSG00000168036|chr3:41225827-41225831|TTCAA/-|frameshift_variant;ENSG00000168036|ENST00000349496|CTNNB1;ENSG00000173801|ENST00000393931|JUP	43.650786325866115	0.5155049133366767	6				NaN	NaN	0	NaN	6383	3120	9503
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9506	26.787	NaN	11283	30	0	1153.3	0.106			+	34891	SAAAGGLGSLV	11	76	451.75107116612264	901.4875893990453	2	451.7520446777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAAAGGLGSLV_	REV__ENSG00000008869|ENST00000233099|HEATR5B;REV__nc|ENSG00000008869|Q9P2D3-2|HEATR5B;REV__nc|ENSG00000008869|Q9P2D3-3|HEATR5B	44.377184641726394	0.49804979881800077	6				NaN	NaN	0	NaN	6384	3120	9503
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9507	26.789	NaN	9374.7	30	0	902.98	0.106	+			41347	SVLVSAGNVK	10	70	487.2877373214056	972.5609217096112	2	487.2875061035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVLVSAGNVK_	DYNC1H1|p.F2635Lfs*67|1|0.16|ENSG00000197102|chr14:102017141-102017141|T/-|frameshift_variant;DYNC1H1|p.K3112Hfs*3|1|0.31|ENSG00000197102|chr14:102027998-102027999|-/TCACAAG|frameshift_variant;DYNC1H1|p.W4201Gfs*43|1|0.42|ENSG00000197102|chr14:102043958-102043958|G/-|frameshift_variant;ENSG00000197102|ENST00000360184|DYNC1H1	104.01359247289065	0.06577755598965461	6				NaN	NaN	0	NaN	6385	3120	9503
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9508	26.791	NaN	13932	30	0	2364.7	0.106			+	9951	ERAWVDTSI	9	85	538.7741212635458	1075.5336895938915	2	538.7747802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ERAWVDTSI_	REV__EIF4A3|p.G340E|1|0.17|ENSG00000141543|chr17:80136300-80136300|C/T|missense_variant	54.776311868738084	0.25715957988447635	6				NaN	NaN	0	NaN	6386	3120	9503
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9509	26.793	NaN	3493.4	30	0	522.96	0.035	+			49426	VVVDEAIQK	9	66	500.7883229195309	999.5620929058618	2	500.7878723144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VVVDEAIQK_	ENSG00000139631|ENST00000444623|CSAD;nc|ENSG00000139631|Q9Y600-2|CSAD;nc|ENSG00000139631|Q9Y600-3|CSAD	47.657333605630114	0.33044192980041115	6				NaN	NaN	0	NaN	6387	3120	9503
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9510	26.793	NaN	7880	30	0	637.24	0.139	+			51173	YPGCTKVY	8	75	494.23431363294316	986.4540743326863	2	494.2340087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_YPGC(Carbamidomethyl (C))TKVY_	ENSG00000102554|ENST00000377687|KLF5;nc|ENSG00000102554|Q13887-2|KLF5;nc|ENSG00000102554|Q13887-4|KLF5	76.7741389293348	0.3504530765139327	6				NaN	NaN	0	NaN	6388	3120	9503
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9528	26.83	NaN	295120	30	0	103310	0.148	+			15142	GTSEFITGK	9	80	470.24303363589524	938.4715143385905	2	470.2427673339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTSEFITGK_	ENSG00000110002|ENST00000456829|VWA5A;VWA5A|p.D571Mfs*3|1|0.56|ENSG00000110002|chr11:124137094-124137094|A/-|frameshift_variant	141.52041321563706	0.009766778904176347	6				NaN	NaN	0	NaN	6403	3123	9527
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9529	26.833	NaN	15463	30	0	3919.9	0.106	+			38221	SQGTPISLK	9	74	465.7666436540654	929.5187343749308	2	465.76666259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SQGTPISLK_	ENSG00000167670|ENST00000301280|CHAF1A	120.30596017624542	0.02101454110788768	6				NaN	NaN	0	NaN	6404	3123	9527
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9530	26.835	NaN	35457	30	0	3977.7	0.106	+			34753	RYASINTHL	9	96	537.7884510663234	1073.5623491994468	2	537.7888793945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RYASINTHL_	CSNK1D|p.R358Gfs*12|1|0.25|ENSG00000141551|chr17:82249000-82249000|G/-|frameshift_variant;CSNK1D|p.T344Hfs*26|1|0.26|ENSG00000141551|chr17:82249459-82249459|G/-|frameshift_variant;ENSG00000141551|ENST00000314028|CSNK1D;ENSG00000213923|ENST00000396832|CSNK1E;ENST00000578904.1_1_17:80208040-80213403:-|nuORF;ENST00000581241.5_1_17:80206597-80211051:-|nuORF;ENST00000584377.5_1_17:80203885-80211156:-|nuORF;nc|ENSG00000141551|P48730-2|CSNK1D	58.22992032128504	0.22837015374068087	6				NaN	NaN	0	NaN	6405	3123	9527
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9531	26.837	NaN	12566	30	0	5950.6	0.106	+			28524	NIEFITAGG	9	78	461.23782370221863	920.4610944712373	2	461.2375793457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NIEFITAGG_	ENSG00000145555|ENST00000513610|MYO10;MYO10|p.G1223Rfs*28|1|0.25|ENSG00000145555|chr5:16694504-16694505|-/T|frameshift_variant;MYO10|p.I417Tfs*39|1|0.05|ENSG00000145555|chr5:16764326-16764327|-/ACAAATCTCTG|frameshift_variant;MYO10|p.N507Qfs*30|1|0.11|ENSG00000145555|chr5:16762613-16762614|-/TG|frameshift_variant;MYO10|p.S468Ffs*8|1|0.05|ENSG00000145555|chr5:16763679-16763680|-/A|frameshift_variant	87.69643885390035	0.07135982304947239	6				NaN	NaN	0	NaN	6406	3123	9527
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9532	26.839	NaN	4805.8	30	0	548.73	0.106			+	26696	LVHSGVRMVS	10	45	362.2026478574476	1083.5861141725427	3	362.2027282714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LVHSGVRMVS_	REV__ENST00000421896.1_1_6:7481658-7482147:-|nuORF	28.081489160057373	0.6505064946289502	6				NaN	NaN	0	NaN	6407	3123	9527
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9533	26.841	NaN	10490	30	0	3790.8	0.106	+			34811	RYLEKPMEI	9	72	597.81334951275	1193.6121460923	2	597.8135986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_RYLEKPM(Oxidation (M))EI_	ENSG00000168610|ENST00000264657|STAT3;nc|ENSG00000168610|P40763-2|STAT3;nc|ENSG00000168610|P40763-3|STAT3;STAT3|p.R729Afs*3|2|0.33|ENSG00000168610|chr17:42316861-42316861|G/-|frameshift_variant	85.16082228582465	0.07850854922700509	6				NaN	NaN	0	NaN	6408	3123	9527
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9534	26.842	NaN	17222	30	0	7799.8	0.033	+			14201	GSSASLVLK	9	66	431.25581529958674	860.4970776659735	2	431.25567626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GSSASLVLK_	ENSG00000075415|ENST00000552981|SLC25A3;ENST00000546766.5_1_12:98989476-98995303:+|nuORF;ENST00000547869.1_1_12:98994914-98995303:+|nuORF;ENST00000551123.5_1_12:98989412-98995303:+|nuORF;nc|ENSG00000075415|Q00325|SLC25A3	72.87924865735499	0.12833875048249987	6				NaN	NaN	0	NaN	6409	3123	9527
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9553	26.878	NaN	42556	30	0	20124	0.214	+			14863	GTLMWHQMK	9	70	383.18434426540693	1146.5312033964208	3	383.1844177246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_GTLM(Oxidation (M))WHQMK_	ENST00000346169.6_1_3:184032401-184033585:+|nuORF;ENST00000352767.7_2_3:184032446-184033585:+|nuORF	52.936696900407355	0.27249468807391813	6				NaN	NaN	0	NaN	6425	3126	9552
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9554	26.882	NaN	5455.7	30	0	3119.1	0.106			+	5982	AVLRRLIAE	9	31	347.55742389755807	1039.6504422928742	3	347.5574035644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVLRRLIAE_	REV__ENSG00000126453|ENST00000246784|BCL2L12;REV__nc|ENSG00000126453|Q9HB09-3|BCL2L12	27.882242232435846	0.5426732730940306	6				NaN	NaN	0	NaN	6426	3126	9552
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9555	26.884	NaN	4528.5	30	0	756.26	0.106	+			34610	RVPLAIVNK	9	76	505.32969649887	1008.6448400645401	2	505.3296203613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RVPLAIVNK_	DYNC1H1|p.F2635Lfs*67|1|0.16|ENSG00000197102|chr14:102017141-102017141|T/-|frameshift_variant;DYNC1H1|p.G1902Vfs*27|2|0.27|ENSG00000197102|chr14:102006154-102006154|G/-|frameshift_variant;DYNC1H1|p.K3112Hfs*3|1|0.31|ENSG00000197102|chr14:102027998-102027999|-/TCACAAG|frameshift_variant;DYNC1H1|p.W4201Gfs*43|1|0.42|ENSG00000197102|chr14:102043958-102043958|G/-|frameshift_variant;ENSG00000197102|ENST00000360184|DYNC1H1	84.9155231211612	0.07920012719736333	6				NaN	NaN	0	NaN	6427	3126	9552
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9556	26.886	NaN	6028.5	30	0	827.7	0.106	+			9147	EGMQNLAPN	9	67	487.22384039012024	972.4331278470405	2	487.2239685058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EGMQNLAPN_	ENSG00000104365|ENST00000520810|IKBKB;ENST00000518647.5_1_8:42129618-42174557:+|nuORF;ENST00000520201.5_1_8:42129679-42177019:+|nuORF;IKBKB|p.G558Efs*6|1|0.35|ENSG00000104365|chr8:42320824-42320824|G/-|frameshift_variant;IKBKB|p.P405Sfs*5|1|0.04|ENSG00000104365|chr8:42317742-42317743|-/TTCA|frameshift_variant;IKBKB|p.R404Lfs*5|1|0.04|ENSG00000104365|chr8:42317741-42317742|-/T|frameshift_variant;nc|ENSG00000104365|O14920-2|IKBKB;nc|ENSG00000104365|O14920-3|IKBKB;nc|ENSG00000104365|O14920-4|IKBKB	60.97194046774394	0.20551255781574032	6				NaN	NaN	0	NaN	6428	3126	9552
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9557	26.888	NaN	5954.2	30	0	1392.3	0.106	+			37672	SLRRRPAETL	10	54	400.23881396613365	1197.694612498601	3	400.23876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SLRRRPAETL_	ENSG00000061273|ENST00000080059|HDAC7;HDAC7|p.M769Wfs*12|1|0.42|ENSG00000061273|chr12:47787744-47787744|G/-|frameshift_variant;nc|ENSG00000061273|Q8WUI4-3|HDAC7;nc|ENSG00000061273|Q8WUI4-4|HDAC7;nc|ENSG00000061273|Q8WUI4-6|HDAC7;nc|ENSG00000061273|Q8WUI4-7|HDAC7;nc|ENSG00000061273|Q8WUI4-8|HDAC7;nc|ENSG00000061273|Q8WUI4|HDAC7	24.231819034082204	0.6819444564287812	6				NaN	NaN	0	NaN	6429	3126	9552
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9558	26.889	NaN	8102.7	30	0	680	0.034	+			40590	SVAGLCAIGPS	11	72	487.7518084475822	973.4890639619645	2	487.7528076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVAGLCAIGPS_	ENSG00000015532|ENST00000017003|XYLT2;ENST00000571021.1_1_17:48437265-48437649:+|nuORF	51.19269402634007	0.4047928213175833	6				NaN	NaN	0	NaN	6430	3126	9552
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9559	26.89	NaN	2025.2	30	0	208.14	0.141	+			20228	KELQTLHNL	9	66	548.3119213519557	1094.6092897707113	2	548.3125610351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KELQTLHNL_	ENSG00000170759|ENST00000302418|KIF5B	46.45678178249821	0.34452392205506005	6				NaN	NaN	0	NaN	6431	3126	9552
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9577	26.929	NaN	63233	30	0	34064	0.214	+			32357	QTYVGITEK	9	82	519.7774540614083	1037.5403551896165	2	519.7769775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QTYVGITEK_	ENSG00000144028|ENST00000323853|SNRNP200	133.9934435666947	0.013297982075521412	6				NaN	NaN	0	NaN	6446	3129	9576
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9578	26.933	NaN	9382.7	30	0	2551.1	0.106	+			5629	AVCYQAITK	9	69	527.2735873237802	1052.5326217143604	2	527.273681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_AVC(Carbamidomethyl (C))YQAITK_	ENSG00000140632|ENST00000321919|GLYR1;nc|ENSG00000140632|Q49A26-3|GLYR1;nc|ENSG00000140632|Q49A26-4|GLYR1;nc|ENSG00000140632|Q49A26-5|GLYR1	101.25262130126117	0.03792372629710479	6				NaN	NaN	0	NaN	6447	3129	9576
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9579	26.935	NaN	5288.6	30	0	1377.4	0.106			+	30553	QALKLDGEL	9	69	493.7796361901247	985.5447194470494	2	493.779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QALKLDGEL_	REV__ENSG00000109061|ENST00000226207|MYH1;REV__ENSG00000109063|ENST00000583535|MYH3;REV__ENSG00000125414|ENST00000245503|MYH2;REV__ENSG00000133020|ENST00000403437|MYH8;REV__ENSG00000264424|ENST00000255381|MYH4;REV__MYH8|p.E1123Gfs*19|1|0.39|ENSG00000133020|chr17:10400757-10400758|-/C|frameshift_variant;REV__MYH8|p.K1582Nfs*3|1|0.04|ENSG00000133020|chr17:10395349-10395350|-/G|frameshift_variant	44.116797842482775	0.37197099687881774	6				NaN	NaN	0	NaN	6448	3129	9576
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9580	26.936	NaN	10338	30	0	1328	0.106	+			27531	MPADTNKAF	9	74	497.73695646292856	993.4593599926571	2	497.73663330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MPADTNKAF_	ENSG00000125037|ENST00000245046|EMC3;ENST00000487465.5_1_3:10011273-10028351:-|nuORF;nc|ENSG00000125037|Q9P0I2-2|EMC3	101.25262130126117	0.03792372629710479	6				NaN	NaN	0	NaN	6449	3129	9576
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9581	26.938	NaN	4257.9	30	0	483.72	0.106	+			34467	RVADRLYGVYK	11	56	447.2542939025245	1338.7410523077735	3	447.25384521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RVADRLYGVYK_	ENSG00000114520|ENST00000251775|SNX4;ENST00000471751.5_1_3:125166625-125239024:-|nuORF;ENST00000473417.5_1_3:125188296-125239016:-|nuORF;nc|ENSG00000114520|O95219-2|SNX4	39.873155843976775	0.5596786644756743	6				NaN	NaN	0	NaN	6450	3129	9576
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9582	26.94	NaN	5137.8	30	0	467.46	0.106	+			23960	LDSTGVNIL	9	72	466.25846069953514	930.5023684658703	2	466.2583312988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LDSTGVNIL_	ENSG00000188610|ENST00000369390|FAM72B;ENST00000471903.2_1:120837853-120854583:+|nuORF;nc|ENSG00000188610|Q86X60-2|FAM72B	93.19546047674547	0.05585629608842056	6				NaN	NaN	0	NaN	6451	3129	9576
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9583	26.942	NaN	10565	30	0	1244.5	0.035			+	2367	ANDIQLVANA	10	70	514.7724347916395	1027.530316650079	2	514.7722778320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ANDIQLVANA_	REV__CON__Q7Z3Z0;REV__ENSG00000204897|ENST00000312150|KRT25	47.95952297671804	0.47580206326914537	6				NaN	NaN	0	NaN	6452	3129	9576
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9601	26.978	NaN	10955	30	0	2186.3	0.214	+			43666	TIYNAAIQK	9	78	511.28780400797405	1020.5610550827481	2	511.2879638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TIYNAAIQK_	ENSG00000164169|ENST00000322396|PRMT9;nc|ENSG00000164169|Q6P2P2-2|PRMT9	101.25262130126117	0.03792372629710479	6				NaN	NaN	0	NaN	6467	3132	9600
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9602	26.982	NaN	5466.5	30	0	2788.8	0.106	+			17157	HTDLPSPLK	9	68	504.27943690627137	1006.5443208793428	2	504.2801208496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HTDLPSPLK_	nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM	65.46538089061403	0.16805504838372562	6				NaN	NaN	0	NaN	6468	3132	9600
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9603	26.984	NaN	5212.3	30	0	885.06	0.106	+			48004	VSQQLSSL	8	63	431.2358054806725	860.4570580281451	2	431.236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSQQLSSL_	CDH23|p.F3223Lfs*43|1|0.34|ENSG00000107736|chr10:71812773-71812773|T/-|frameshift_variant	66.42927471994793	0.4381325844043345	6				NaN	NaN	0	NaN	6469	3132	9600
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9604	26.986	NaN	4253.7	30	0	1676.4	0.106				-1	TSTRRMRTM	9	44	391.1939770102106	1170.5601016308317	3	391.1937561035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Oxidation (M)	_TSTRRM(Oxidation (M))RTM(Oxidation (M))_	ENST00000401957.6_1_7:22233026-22233254:-|nuORF	26.69291269510374	0.5537881896960711	6				NaN	NaN	0	NaN	6470	3132	9600
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9605	26.987	NaN	2831.8	30	0	177.71	0.106	+			17516	IDKTTAAF	8	64	433.7348877969197	865.4552226606394	2	433.7347106933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IDKTTAAF_	ENSG00000124562|ENST00000244520|SNRPC;ENST00000474635.1_2_6:34730443-34740721:+|nuORF	51.33545320467046	0.5859736979383976	6				NaN	NaN	0	NaN	6471	3132	9600
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9606	26.989	NaN	3567.3	30	0	528.1	0.037	+			45588	TYNQKHSLF	9	50	379.8611877002372	1136.5617337009116	3	379.8597412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TYNQKHSLF_	ENSG00000165175|ENST00000614558|MID1IP1	26.79610172149135	0.5528238334041078	6				NaN	NaN	0	NaN	6472	3132	9600
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9607	26.99	NaN	2039.8	30	0	193.32	0.142			+	31242	QHEKSQSVQT	10	63	586.2873521313146	1170.5601513294291	2	586.2879028320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QHEKSQSVQT_	REV__ENST00000369425.5_1_10:113915595-113915829:-|nuORF	48.601550744091256	0.46988609897316763	6				NaN	NaN	0	NaN	6473	3132	9600
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9626	27.029	NaN	16399	30	0	1554.6	0.214	+			1514	AGAAVLPVK	9	72	413.2632928777288	824.5120328222577	2	413.2632751464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AGAAVLPVK_	ENSG00000178691|ENST00000322652|SUZ12	119.55681237560556	0.021468056596162587	6				NaN	NaN	0	NaN	6489	3135	9625
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9627	27.033	NaN	6518.6	30	0	1037.7	0.106	+			50847	YETSKMKVL	9	78	549.79704707494	1097.57954121668	2	549.7976684570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YETSKMKVL_	ENSG00000102316|ENST00000375068|MAGED2;nc|ENSG00000102316|Q9UNF1-2|MAGED2	68.84614121027924	0.14577793175421136	6				NaN	NaN	0	NaN	6490	3135	9625
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9628	27.035	NaN	5579	30	0	613.25	0.106			+	18220	INGGRGYKI	9	76	489.2797050765704	976.5448572199408	2	489.2792663574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_INGGRGYKI_	REV__TLR4|p.E671G|1|0.47|ENSG00000136869|chr9:117714140-117714140|A/G|missense_variant	51.33545320467046	0.2872990594074956	6				NaN	NaN	0	NaN	6491	3135	9625
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9629	27.037	NaN	5780.4	30	0	936.48	0.106			+	47917	VSLSAVDKQ	9	66	473.7636520210376	NaN	0	473.7637939453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSLSAVDKQ_	REV__TPR|p.A450D|1|0.28|ENSG00000047410|chr1:186359839-186359839|G/T|missense_variant	47.95952297671804	0.22075498469600283	6				NaN	NaN	0	NaN	6492	3135	9625
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9630	27.039	NaN	2509.4	30	0	907.33	0.106				-1	GRGEEELLMR	10	48	603.3011228694997	1204.5876928057994	2	603.3014526367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_GRGEEELLM(Oxidation (M))R_	ENST00000287912.7_1_7:155437535-155471332:+|nuORF	29.170058357718403	0.6416167986984785	6				NaN	NaN	0	NaN	6493	3135	9625
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9631	27.04	NaN	5850.2	30	0	807.96	0.036	+			33599	RLPDERGPL	9	76	526.7956072306242	1051.5766615280484	2	526.7965087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RLPDERGPL_	ENSG00000115457|ENST00000233809|IGFBP2;ENST00000436812.1_3_2:217526523-217528824:+|nuORF;ENST00000490362.1_1_2:217526523-217526805:+|nuORF;IGFBP2|p.E251K|1|0.3|ENSG00000115457|chr2:216661936-216661936|G/A|missense_variant	52.936696900407355	0.27249468807391813	6				NaN	NaN	0	NaN	6494	3135	9625
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9632	27.041	NaN	7776.9	30	0	2203.5	0.14	+			45085	TVIDSQTHY	9	67	532.2564227897517	1062.4982926463033	2	532.2567749023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TVIDSQTHY_	ENSG00000166557|ENST00000299705|TMED3	112.41091882917199	0.026537921851008135	6				NaN	NaN	0	NaN	6495	3135	9625
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9650	27.08	NaN	10701	30	0	1548.8	0.214	+			41699	SVSDLAPPR	9	63	471.25585135475825	940.4971497763165	2	471.25555419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSDLAPPR_	ENSG00000166295|ENST00000299381|ANAPC16	71.87747018426188	0.13267044672804276	6				NaN	NaN	0	NaN	6510	3138	9649
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9651	27.084	NaN	6735.6	30	0	1244.2	0.106	+			233	AAMEPLTAR	9	57	480.2523883822341	958.4902238312682	2	480.2521057128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAMEPLTAR_	nc|ENSG00000182872|P0DW28|RBM10	77.31757898189308	0.1091473830098891	6				NaN	NaN	0	NaN	6511	3138	9649
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9652	27.086	NaN	3660.8	30	0	551.15	0.106	+			16730	HLLARAVA	8	60	425.7665245081739	849.5184960831479	2	425.766357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HLLARAVA_	ENSG00000130714|ENST00000402686|POMT1;ENST00000462375.5_1_9:134385592-134386855:+|nuORF;nc|ENSG00000130714|Q9Y6A1-3|POMT1;nc|ENSG00000130714|Q9Y6A1-4|POMT1;nc|ENSG00000130714|Q9Y6A1|POMT1;POMT1|p.L421*|1|0.41|ENSG00000130714|chr9:131515440-131515440|C/-|frameshift_variant	20.481830146152948	0.8005983782650069	6				NaN	NaN	0	NaN	6512	3138	9649
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9653	27.088	NaN	1872.5	30	0	1008.9	0.106				-1	 	0	39	351.1964336818374	700.3783144304748	2	351.1963195800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6513	3138	9649
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9654	27.09	NaN	7884.2	30	0	3717.8	0.106			+	-1	KMRGNRTVDL	10	44	402.5524063264779	1204.6353895796337	3	402.5522766113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_KM(Oxidation (M))RGNRTVDL_	REV__ENST00000603199.1_1_2:61698862-61707476:+|nuORF	27.047317107675042	0.6589519614906109	6				NaN	NaN	0	NaN	6514	3138	9649
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9655	27.092	NaN	4783.4	30	0	1517	0.038			+	-1	ISGKMDMDLY	10	54	396.84740038898076	1187.5203717671423	3	396.8473205566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_ISGKMDM(Oxidation (M))DLY_	REV__ENSG00000176994|ENST00000406438|SMCR8;REV__nc|ENSG00000176994|Q8TEV9-2|SMCR8	36.31764250033197	0.5830761606467809	6				NaN	NaN	0	NaN	6515	3138	9649
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9656	27.092	NaN	3526.4	30	0	859.45	0.141			+	9883	EQKKESQF	8	64	512.2592623194823	1022.5039717057647	2	512.2590942382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EQKKESQF_	REV__ENSG00000127980|ENST00000248633|PEX1;REV__ENST00000484913.5_1_7:92116773-92148321:-|nuORF;REV__PEX1|p.R636Gfs*9|1|0.3|ENSG00000127980|chr7:92504897-92504897|T/-|frameshift_variant	49.44154591367651	0.597725784090933	6				NaN	NaN	0	NaN	6516	3138	9649
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9675	27.13	NaN	12020	30	0	4223.7	0.214	+			41833	SVSTITTIGY	10	72	521.2775566374215	1040.540560341643	2	521.27783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSTITTIGY_	ENSG00000124780|ENST00000373231|KCNK17;KCNK17|p.G168Afs*61|3|0.31|ENSG00000124780|chr6:39304505-39304505|C/-|frameshift_variant;nc|ENSG00000124780|Q96T54-4|KCNK17	42.396135135203025	0.5270658956260207	6				NaN	NaN	0	NaN	6532	3141	9674
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9676	27.134	NaN	6309.1	30	0	1066.1	0.106	+			25452	LPQGEKVQAM	10	76	550.792418437644	1099.5702839420878	2	550.79248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LPQGEKVQAM_	ENSG00000135821|ENST00000331872|GLUL;ENST00000475808.5_1_1:182355349-182357923:-|nuORF;ENST00000489818.5_1_1:182354893-182357872:-|nuORF;ENST00000491322.1_1_1:182356257-182357923:-|nuORF	83.6470233535746	0.16744595502813267	6				NaN	NaN	0	NaN	6533	3141	9674
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9677	27.136	NaN	17488	30	0	3748	0.106			+	28596	NKNELNNKK	9	81	367.8731164547553	NaN	0	367.87310791015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NKNELNNKK_	REV__ENSG00000188994|ENST00000369577|ZNF292;REV__nc|ENSG00000188994|O60281-2|ZNF292;REV__ZNF292|p.N2626Kfs*10|1|0.07|ENSG00000188994|chr6:87261506-87261509|ATTC/-|frameshift_variant;REV__ZNF292|p.R2545Gfs*14|1|0.18|ENSG00000188994|chr6:87261256-87261256|A/-|frameshift_variant	39.252832667884924	0.27938773122138094	6				NaN	NaN	0	NaN	6534	3141	9674
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9678	27.138	NaN	18854	30	0	8016.3	0.106			+	29906	PLPPPFLNAGP	11	69	373.8769199317737	1118.6089303955212	3	373.8766784667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PLPPPFLNAGP_	REV__ENSG00000196118|ENST00000543610|CFAP119;REV__ENST00000546006.5_1_16:30771925-30773129:-|nuORF;REV__nc|ENSG00000196118|A1A4V9-4|CFAP119	31.634271133179894	0.6579734920221648	6				NaN	NaN	0	NaN	6535	3141	9674
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9679	27.14	NaN	7644.8	30	0	2667.6	0.106	+			14156	GSMTVVTVK	9	69	461.25693075042545	920.4993085676509	2	461.2571105957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GSMTVVTVK_	ENSG00000001461|ENST00000374399|NIPAL3;nc|ENSG00000001461|Q6P499-2|NIPAL3	117.81106730687013	0.02252488733980868	6				NaN	NaN	0	NaN	6536	3141	9674
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9680	27.141	NaN	4754.4	30	0	789.24	0.04	+			22805	KVFGNEIKLEK	11	77	435.5907524576486	1303.7504279731459	3	435.59033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KVFGNEIKLEK_	ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232323706-232327997:-|nuORF;ENST00000494618.1_1_2:232322276-232325237:-|nuORF	42.242577148874844	0.5272577467055767	6				NaN	NaN	0	NaN	6537	3141	9674
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9681	27.142	NaN	5448.3	30	0	949.07	0.142	+			14317	GSYNKVFLAK	10	56	376.2141049190246	1125.6204853572738	3	376.2131042480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GSYNKVFLAK_	ENSG00000099341|ENST00000215071|PSMD8;ENST00000592001.5_1_19:38865430-38871817:+|nuORF	43.650786325866115	0.5155049133366767	6				NaN	NaN	0	NaN	6538	3141	9674
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9699	27.18	NaN	15276	30	0	8239.8	0.214	+			32540	QVSPRITFK	9	61	538.3164824962549	1074.6184120593098	2	538.3168334960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QVSPRITFK_	ENSG00000151229|ENST00000280871|SLC2A13;ENST00000465517.1_1_12:40223765-40265636:-|nuORF;SLC2A13|p.T491Qfs*41|1|0.08|ENSG00000151229|chr12:39764833-39764833|T/-|frameshift_variant	99.78786539795823	0.03941834715970116	6				NaN	NaN	0	NaN	6553	3144	9698
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9700	27.184	NaN	5042.6	30	0	616.38	0.106	+			34986	SAAPRTVAL	9	61	443.2611847377077	884.5078165422154	2	443.2608337402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAAPRTVAL_	ENSG00000223865|ENST00000418931|HLA-DPB1;ENST00000469120.1_1_6:33043797-33048717:+|nuORF;HLA-DPB1|p.Q193Pfs*17|1|0.18|ENSG00000223865|chr6:33085156-33085157|-/C|frameshift_variant;HLA-DPB1|p.Q193Sfs*35|1|0.35|ENSG00000223865|chr6:33085157-33085157|C/-|frameshift_variant	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	6554	3144	9698
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9701	27.186	NaN	8663.1	30	0	1955	0.106	+			31733	QPAENVNQY	9	68	531.7462019872034	1061.4778510412068	2	531.74658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QPAENVNQY_	ENSG00000130985|ENST00000335972|UBA1;nc|ENSG00000130985|P22314-2|UBA1	122.1759843771914	0.019882474861609503	6				NaN	NaN	0	NaN	6555	3144	9698
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9702	27.188	NaN	4266	30	0	518.46	0.106	+			27626	MPPYPGPGH	9	61	476.7208161898326	951.4270794464652	2	476.720458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MPPYPGPGH_	ENSG00000171747|ENST00000307751|LGALS4	60.403631409065575	0.21025000616765316	6				NaN	NaN	0	NaN	6556	3144	9698
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9703	27.19	NaN	4901.6	30	0	669.77	0.106	+			2411	APAPPASQY	9	60	451.22417032226497	900.43378771133	2	451.223876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_APAPPASQY_	ENSG00000050820|ENST00000162330|BCAR1;nc|ENSG00000050820|P56945-2|BCAR1;nc|ENSG00000050820|P56945-3|BCAR1;nc|ENSG00000050820|P56945-5|BCAR1;nc|ENSG00000050820|P56945-6|BCAR1;nc|ENSG00000050820|P56945-7|BCAR1;nc|ENSG00000050820|P56945-8|BCAR1	99.37495909608758	0.03983967222258828	6				NaN	NaN	0	NaN	6557	3144	9698
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9704	27.191	NaN	7617.8	30	0	1251.6	0.033	+			37620	SLQAQVVL	8	66	429.258298997313	856.502045061426	2	429.2578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLQAQVVL_	ENSG00000163702|ENST00000403601|IL17RC;ENST00000451271.5_1_3:9958923-9975274:+|nuORF;ENST00000483582.5_1_3:9958999-9974679:+|nuORF;nc|ENSG00000288550|Q8NAC3-3|IL17RC;nc|ENSG00000288550|Q8NAC3-4|IL17RC;nc|ENSG00000288550|Q8NAC3-5|IL17RC;nc|ENSG00000288550|Q8NAC3-6|IL17RC;nc|ENSG00000288550|Q8NAC3-7|IL17RC;nc|ENSG00000288550|Q8NAC3-8|IL17RC;nc|ENSG00000288550|Q8NAC3|IL17RC	104.74654710444128	0.24806011021879068	6				NaN	NaN	0	NaN	6558	3144	9698
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9705	27.192	NaN	11179	30	0	6020.4	0.145	+			40826	SVEERITQVAK	11	55	420.56986244087	1258.68775792281	3	420.5697937011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVEERITQVAK_	CHD4|p.L1404Ffs*9|1|0.42|ENSG00000111642|chr12:6582872-6582873|-/A|frameshift_variant;CHD4|p.N1569Ifs*9|1|0.44|ENSG00000111642|chr12:6581364-6581364|T/-|frameshift_variant;CHD5|p.P1887Rfs*14|1|0.5|ENSG00000116254|chr1:6106698-6106698|G/-|frameshift_variant;ENSG00000111642|ENST00000544040|CHD4;ENSG00000116254|ENST00000262450|CHD5;ENSG00000170004|ENST00000330494|CHD3;nc|ENSG00000111642|Q14839-2|CHD4;nc|ENSG00000170004|Q12873-2|CHD3;nc|ENSG00000170004|Q12873-3|CHD3	27.047317107675042	0.7060868989289394	6				NaN	NaN	0	NaN	6559	3144	9698
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9723	27.231	NaN	19179	30	0	2788.5	0.214	+			38355	SRNTLLTPAVA	11	65	381.5558788707385	1141.6458072124155	3	381.5556945800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SRNTLLTPAVA_	nc|ENSG00000107560|Q7L804-2|RAB11FIP2	37.81151784470057	0.5878881669006212	6				NaN	NaN	0	NaN	6574	3147	9722
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9724	27.235	NaN	7843.2	30	0	1064.7	0.106	+			33391	RIATGSFLK	9	75	496.7981436731295	991.581734413059	2	496.79779052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RIATGSFLK_	ENSG00000128050|ENST00000512576|PAICS;ENST00000517543.1_1_8:4645110-4645266:+|nuORF;nc|ENSG00000128050|P22234-2|PAICS	98.58198989935565	0.04066992115528678	6				NaN	NaN	0	NaN	6575	3147	9722
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9725	27.237	NaN	5555.3	30	0	1317.2	0.106	+			22234	KSYFEKSK	8	71	508.7743621008729	1015.5341712685458	2	508.7740783691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KSYFEKSK_	ENSG00000158874|ENST00000367990|APOA2	61.691277971877994	0.48503807091462214	6				NaN	NaN	0	NaN	6576	3147	9722
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9726	27.239	NaN	13954	30	0	4642.8	0.106			+	36959	SILTPHPRLA	10	64	368.8889551296969	1103.6450359892908	3	368.8888244628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SILTPHPRLA_	REV__ENST00000264039.6_1_2:241407315-241407444:+|nuORF	36.446750945000026	0.5818864909973037	6				NaN	NaN	0	NaN	6577	3147	9722
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9727	27.241	NaN	6586.3	30	0	758.36	0.106	+			753	AEEAMKAL	8	64	431.7205569584822	861.4265609837644	2	431.7203674316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEEAMKAL_	ENSG00000160710|ENST00000368474|ADAR;nc|ENSG00000160710|P55265-2|ADAR;nc|ENSG00000160710|P55265-3|ADAR;nc|ENSG00000160710|P55265-4|ADAR;nc|ENSG00000160710|P55265-5|ADAR	87.75429964447693	0.2842685068779738	6				NaN	NaN	0	NaN	6578	3147	9722
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9728	27.242	NaN	2975.8	30	0	320.49	0.034	+			35576	SAYGGDQNY	9	57	487.6960532786827	973.3775536241654	2	487.6954345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SAYGGDQNY_	ENSG00000152795|ENST00000295470|HNRNPDL;nc|ENSG00000152795|O14979-2|HNRNPDL	46.45678178249821	0.34452392205506005	6				NaN	NaN	0	NaN	6579	3147	9722
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9729	27.243	NaN	4135.7	30	0	735.64	0.145			+	-1	RICVTQSMIVT	11	72	436.56492282476245	1306.6729390744874	3	436.56475830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_RIC(Carbamidomethyl (C))VTQSMIVT_	REV__OR5AK2|p.R138Q|2|0.3|ENSG00000181273|chr11:56989326-56989326|G/A|missense_variant	39.873155843976775	0.5596786644756743	6				NaN	NaN	0	NaN	6580	3147	9722
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9747	27.282	NaN	8627.3	30	0	2354.9	0.214	+			1946	AISSTVLGK	9	62	438.26342546524353	874.5122979972871	2	438.2630615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AISSTVLGK_	ENSG00000105976|ENST00000397752|MET;nc|ENSG00000105976|P08581-2|MET	107.00750918261382	0.032051501805654005	6				NaN	NaN	0	NaN	6595	3150	9746
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9748	27.286	NaN	11315	30	0	2219	0.106	+			5844	AVIIVGSAK	9	61	429.2762112613125	856.537869589425	2	429.27618408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVIIVGSAK_	ENSG00000138074|ENST00000310574|SLC5A6;ENST00000464538.1_1_2:27428216-27429031:-|nuORF;ENST00000488743.6_1_2:27425876-27434347:-|nuORF	79.71258880314673	0.09879134589249085	6				NaN	NaN	0	NaN	6596	3150	9746
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9749	27.288	NaN	5283.3	30	0	486.01	0.106			+	31459	QKTKLLVSQ	9	70	522.8239893942018	1043.6334258552035	2	522.8245239257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QKTKLLVSQ_	REV__DYNC2H1|p.L4021Wfs*5|1|0.3|ENSG00000187240|chr11:103358262-103358262|T/-|frameshift_variant;REV__DYNC2H1|p.P3966Hfs*44|1|0.22|ENSG00000187240|chr11:103321194-103321194|T/-|frameshift_variant;REV__ENSG00000187240|ENST00000375735|DYNC2H1;REV__nc|ENSG00000187240|Q8NCM8-2|DYNC2H1	104.0567914643314	0.03506238181059741	6				NaN	NaN	0	NaN	6597	3150	9746
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9750	27.29	NaN	4587.2	30	0	382.31	0.106	+			27532	MPADTNKAF	9	68	497.73695646292856	993.4593599926571	2	497.7363586425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MPADTNKAF_	ENSG00000125037|ENST00000245046|EMC3;ENST00000487465.5_1_3:10011273-10028351:-|nuORF;nc|ENSG00000125037|Q9P0I2-2|EMC3	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	6598	3150	9746
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9751	27.292	NaN	4674.2	30	0	719.76	0.106	+			28784	NPENSELKY	9	67	547.2615645450287	1092.5085761568573	2	547.2616577148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NPENSELKY_	ENSG00000141448|ENST00000269216|GATA6;nc|ENSG00000141448|Q92908-2|GATA6	162.25246889848123	0.0040893836092247005	6				NaN	NaN	0	NaN	6599	3150	9746
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9752	27.294	NaN	2886.1	30	0	1049.9	0.036			+	35170	SAIEGPGLTPV	11	32	347.5258792027676	1039.5558082085029	3	347.5260009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SAIEGPGLTPV_	REV__ENSG00000063015|ENST00000317338|SEZ6;REV__nc|ENSG00000063015|Q53EL9-2|SEZ6;REV__nc|ENSG00000063015|Q53EL9-3|SEZ6;REV__nc|ENSG00000063015|Q53EL9-4|SEZ6;REV__SEZ6|p.P306Lfs*27|1|0.38|ENSG00000063015|chr17:28969896-28969896|C/-|frameshift_variant;REV__SEZ6|p.P892Hfs*50|1|0.15|ENSG00000063015|chr17:28957062-28957062|G/-|frameshift_variant	19.996771675451527	0.7768568223548057	6				NaN	NaN	0	NaN	6600	3150	9746
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9753	27.294	NaN	4140.9	30	0	791.26	0.138			+	43766	TLGTASIAK	9	53	431.2555643837232	860.4965758342464	2	431.25531005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TLGTASIAK_	REV__ENSG00000143107|ENST00000370017|FNDC7	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	6601	3150	9746
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9771	27.334	NaN	11213	30	0	2081.2	0.214				-1	SSCGLPLGK	9	73	459.7390403176516	917.4635277021032	2	459.7389221191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SSC(Carbamidomethyl (C))GLPLGK_	ENSG00000064042|ENST00000503057|LIMCH1;nc|ENSG00000064042|Q9UPQ0-10|LIMCH1;nc|ENSG00000064042|Q9UPQ0-2|LIMCH1;nc|ENSG00000064042|Q9UPQ0-3|LIMCH1;nc|ENSG00000064042|Q9UPQ0-4|LIMCH1;nc|ENSG00000064042|Q9UPQ0-5|LIMCH1;nc|ENSG00000064042|Q9UPQ0-6|LIMCH1;nc|ENSG00000064042|Q9UPQ0-8|LIMCH1;nc|ENSG00000064042|Q9UPQ0-9|LIMCH1;nc|ENSG00000064042|Q9UPQ0|LIMCH1	75.04331003522576	0.118981335847003	6				NaN	NaN	0	NaN	6616	3153	9770
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9772	27.337	NaN	19776	30	0	8368	0.106	+			21927	KRVQPAQNH	9	63	359.8682980645192	1076.5830647937576	3	359.8683776855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KRVQPAQNH_	ENSG00000171488|ENST00000370454|LRRC8C;LRRC8C|p.W509Lfs*20|1|0.33|ENSG00000171488|chr1:89714087-89714088|-/C|frameshift_variant	34.172542307311794	0.4838870758800184	6				NaN	NaN	0	NaN	6617	3153	9770
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9773	27.339	NaN	5824.9	30	0	1368.1	0.106	+			49434	VVVGAVGVGK	10	59	442.7817822293646	883.5490115255292	2	442.7815246582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVVGAVGVGK_	KRAS|p.G12V|32|0.43|ENSG00000133703|chr12:25245350-25245350|C/A|missense_variant;NRAS|p.G12V|1|0.52|ENSG00000213281|chr1:114716126-114716126|C/A|missense_variant	111.64827973302667	0.04310463411224686	6				NaN	NaN	0	NaN	6618	3153	9770
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9774	27.341	NaN	4149.6	30	0	474.15	0.106	+			12382	GDVQILNKY	9	66	525.2834596216846	1048.5523663101692	2	525.2843017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GDVQILNKY_	ENSG00000103044|ENST00000569188|HAS3;ENSG00000170961|ENST00000303924|HAS2	53.08895987439943	0.27122541748218487	6				NaN	NaN	0	NaN	6619	3153	9770
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9775	27.343	NaN	9692.6	30	0	1537.7	0.106	+			50854	YEVKSENL	8	70	491.24794466769447	980.481336402189	2	491.2474365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YEVKSENL_	ENSG00000132383|ENST00000254719|RPA1	90.36981228632155	0.27635063874291205	6				NaN	NaN	0	NaN	6620	3153	9770
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9776	27.345	NaN	2706.4	30	0	511.39	0.036	+			22924	KVPSDTLPLK	10	62	549.3319435001855	1096.649334067171	2	549.33203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KVPSDTLPLK_	ENSG00000053254|ENST00000557258|FOXN3;nc|ENSG00000053254|O00409|FOXN3	38.753607047826485	0.5606299674732264	6				NaN	NaN	0	NaN	6621	3153	9770
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9777	27.345	NaN	3771.1	30	0	518.44	0.141	+			35985	SEHGEKLYL	9	63	538.2735290485489	NaN	0	538.274658203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SEHGEKLYL_	ENSG00000071051|ENST00000233154|NCK2	56.43379154798735	0.16452882468284893	6				NaN	NaN	0	NaN	6622	3153	9770
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9795	27.384	NaN	76510	30	0	10941	0.214	+			16219	HEDKIRVVL	9	93	370.22060744480797	1107.639992934624	3	370.2205810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HEDKIRVVL_	EHD1|p.E248Rfs*50|1|0.19|ENSG00000110047|chr11:64860098-64860098|G/-|frameshift_variant;ENSG00000024422|ENST00000263277|EHD2;ENSG00000110047|ENST00000320631|EHD1;nc|ENSG00000024422|Q9NZN4-2|EHD2	60.11826168202944	0.21262886028301267	6				NaN	NaN	0	NaN	6637	3156	9794
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9796	27.387	NaN	14596	30	0	2990.8	0.106	+			1831	AIIENMSTK	9	75	503.76539331348073	1005.5162336937615	2	503.7654113769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AIIENMSTK_	ENSG00000116729|ENST00000262348|WLS;nc|ENSG00000116729|Q5T9L3-2|WLS;nc|ENSG00000116729|Q5T9L3-3|WLS	117.5257442709337	0.022697614825424036	6				NaN	NaN	0	NaN	6638	3156	9794
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9797	27.39	NaN	8300.6	30	0	965.33	0.106			+	18503	ISIDGRLA	8	60	422.74803104029183	843.4815091473837	2	422.747802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ISIDGRLA_	REV__ZNF566|p.F128Lfs*25|1|0.12|ENSG00000186017|chr19:36449850-36449850|A/-|frameshift_variant	84.9155231211612	0.2928622555056503	6				NaN	NaN	0	NaN	6639	3156	9794
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9798	27.391	NaN	9958.6	30	0	1339.3	0.106	+			35196	SAISSPLTK	9	74	452.26024361475464	902.5059342963093	2	452.26055908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SAISSPLTK_	AKAP13|p.S1688C|1|0.06|ENSG00000170776|chr15:85669792-85669792|C/G|missense_variant;AKAP13|p.T2400Nfs*3|1|0.33|ENSG00000170776|chr15:85730617-85730618|-/C|frameshift_variant;ENSG00000170776|ENST00000394518|AKAP13;nc|ENSG00000170776|Q12802-2|AKAP13;nc|ENSG00000170776|Q12802-4|AKAP13	68.84614121027924	0.14577793175421136	6				NaN	NaN	0	NaN	6640	3156	9794
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9799	27.393	NaN	8787.2	30	0	2004	0.106			+	7294	DASATAILK	9	67	445.25315655524065	888.4917601772813	2	445.25286865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DASATAILK_	REV__ENSG00000123977|ENST00000309931|DAW1;REV__nc|ENSG00000123977|Q8N136-2|DAW1	84.9155231211612	0.07920012719736333	6				NaN	NaN	0	NaN	6641	3156	9794
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9800	27.395	NaN	3977.5	30	0	809.1	0.035	+			43172	TETKTTVEL	9	70	511.2739752483835	1020.5333975635671	2	511.2741394042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TETKTTVEL_	ENSG00000142192|ENST00000346798|APP;nc|ENSG00000142192|P05067-10|APP;nc|ENSG00000142192|P05067-11|APP;nc|ENSG00000142192|P05067-3|APP;nc|ENSG00000142192|P05067-4|APP;nc|ENSG00000142192|P05067-5|APP;nc|ENSG00000142192|P05067-6|APP;nc|ENSG00000142192|P05067-7|APP;nc|ENSG00000142192|P05067-8|APP;nc|ENSG00000142192|P05067-9|APP	63.53385203322761	0.18415635464017938	6				NaN	NaN	0	NaN	6642	3156	9794
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9801	27.396	NaN	5817.5	30	0	1731.5	0.139			+	-1	VCGLVESPL	9	55	487.2547341206831	972.4949153081662	2	487.2545166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_VC(Carbamidomethyl (C))GLVESPL_	REV__ENSG00000180113|ENST00000316081|TDRD6;REV__nc|ENSG00000180113|O60522-2|TDRD6;REV__TDRD6|p.C440Wfs*5|1|0.13|ENSG00000180113|chr6:46689446-46689447|-/G|frameshift_variant;REV__TDRD6|p.L1636Qfs*6|1|0.06|ENSG00000180113|chr6:46693034-46693035|-/AAAG|frameshift_variant;REV__TDRD6|p.N498Kfs*4|1|0.35|ENSG00000180113|chr6:46689616-46689617|-/A|frameshift_variant;REV__TDRD6|p.N917Ifs*2|1|0.35|ENSG00000180113|chr6:46690872-46690872|A/-|frameshift_variant	33.51558372728122	0.4900267029546261	6				NaN	NaN	0	NaN	6643	3156	9794
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9819	27.435	NaN	46967	30	0	8721.9	0.214	+			34356	RTQGLMIMK	9	82	539.2986744369603	1076.5827959407204	2	539.2991333007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTQGLMIMK_	ENSG00000137275|ENST00000259808|RIPK1;nc|ENSG00000137275|Q13546-2|RIPK1	120.27252224102466	0.02103478360410217	6				NaN	NaN	0	NaN	6658	3159	9818
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9820	27.438	NaN	48583	30	0	23584	0.106	+			48697	VTTGSEGLLK	10	80	502.78483892698637	1003.5551249207728	2	502.7845764160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTTGSEGLLK_	ENSG00000134987|ENST00000513710|WDR36;ENST00000505303.5_1_5:110428043-110447004:+|nuORF;nc|ENSG00000134987|Q8NI36|WDR36	143.37361013837676	0.009854612225601756	6				NaN	NaN	0	NaN	6659	3159	9818
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9821	27.44	NaN	20233	30	0	3046.4	0.106			+	24751	LHSPNVGALH	10	88	522.7828948217078	1043.5512367102156	2	522.7830200195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LHSPNVGALH_	REV__ENST00000481757.5_1_2:241513848-241514670:+|nuORF	74.25504064058377	0.24255678544297835	6				NaN	NaN	0	NaN	6660	3159	9818
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9822	27.442	NaN	8289.1	30	0	1355.6	0.106	+			44490	TSSDVIEMK	9	77	505.2468251051171	1008.4790972770343	2	505.246826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TSSDVIEMK_	ENSG00000039123|ENST00000230640|MTREX	126.24258497203832	0.01742065577488747	6				NaN	NaN	0	NaN	6661	3159	9818
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9823	27.444	NaN	3703.5	30	0	785.04	0.106	+			47446	VPVAKTAEL	9	63	464.27881488527436	926.5430768373487	2	464.278564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VPVAKTAEL_	ENSG00000124789|ENST00000262077|NUP153;nc|ENSG00000124789|P49790-2|NUP153;nc|ENSG00000124789|P49790-3|NUP153;NUP153|p.E1073Kfs*44|1|0.07|ENSG00000124789|chr6:17628983-17628983|T/-|frameshift_variant	36.446750945000026	0.4619375763483977	6				NaN	NaN	0	NaN	6662	3159	9818
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9824	27.446	NaN	6034.7	30	0	635.69	0.034	+			6617	AYQKVVAGV	9	72	467.7712038198525	933.527854706505	2	467.7708435058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AYQKVVAGV_	ENSG00000223609|ENST00000650601|HBD;ENSG00000244734|ENST00000335295|HBB	106.41520541750704	0.03265588207292361	6				NaN	NaN	0	NaN	6663	3159	9818
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9825	27.446	NaN	2955.1	30	0	444.83	0.143			+	26523	LTQHFLIVD	9	48	362.53822812804526	1084.5928549843359	3	362.5384521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LTQHFLIVD_	REV__ENST00000398050.3_1_10:127355985-127356390:-|nuORF	26.69291269510374	0.5537881896960711	6				NaN	NaN	0	NaN	6664	3159	9818
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9843	27.486	NaN	18500	30	0	3643.7	0.214	+			38138	SQADGSFLK	9	69	476.7407548553733	951.4669567775467	2	476.7398986816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SQADGSFLK_	ENSG00000152818|ENST00000367545|UTRN;nc|ENSG00000152818|P46939-2|UTRN;UTRN|p.G3160*|1|0.03|ENSG00000152818|chr6:144821001-144821002|AG/-|frameshift_variant;UTRN|p.R3003Pfs*5|1|0.27|ENSG00000152818|chr6:144793915-144793916|-/C|frameshift_variant;UTRN|p.T2422Hfs*35|1|0.47|ENSG00000152818|chr6:144557282-144557282|A/-|frameshift_variant	63.42647028704847	0.1850514934184437	6				NaN	NaN	0	NaN	6679	3162	9842
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9844	27.49	NaN	8193.2	30	0	1945.2	0.106	+			16895	HPIKQVDVL	9	66	524.8112817571184	1047.6080105810368	2	524.8112182617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HPIKQVDVL_	ENSG00000107960|ENST00000224950|STN1	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	6680	3162	9842
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9845	27.492	NaN	5217.9	30	0	503.43	0.106	+			47547	VQYLVNPGV	9	72	494.7749232332551	987.5352935333102	2	494.7745361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VQYLVNPGV_	ENSG00000188818|ENST00000283441|ZDHHC11	73.97473282117947	0.12360187025703594	6				NaN	NaN	0	NaN	6681	3162	9842
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9846	27.493	NaN	3461.2	30	0	2214.6	0.106				-1	 	0	35	343.1990488561876	684.3835447791752	2	343.1988830566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6682	3162	9842
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9847	27.495	NaN	2724.4	30	0	295.15	0.106	+			50741	YEKGDVSL	8	52	455.72953794648197	909.444522959764	2	455.7290954589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YEKGDVSL_	ENSG00000177051|ENST00000317683|FBXO46	79.45101966838831	0.3281480470254892	6				NaN	NaN	0	NaN	6683	3162	9842
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9848	27.497	NaN	3248	30	0	623.4	0.035	+			4781	ATNGPPVLVK	10	64	498.29814070612076	994.5817284790415	2	498.2977294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATNGPPVLVK_	ENSG00000170004|ENST00000330494|CHD3;ENST00000439235.5_1_17:7812698-7814900:+|nuORF;ENST00000470531.5_3_17:7807732-7814900:+|nuORF;ENST00000481999.1_1_17:7813558-7814900:+|nuORF;nc|ENSG00000170004|Q12873-2|CHD3;nc|ENSG00000170004|Q12873-3|CHD3	75.04331003522576	0.23611669241777622	6				NaN	NaN	0	NaN	6684	3162	9842
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9849	27.498	NaN	3004.8	30	0	1381.3	0.144				-1	VSLVVMITML	10	48	374.5481924910649	1120.6227480733949	3	374.548583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_VSLVVM(Oxidation (M))ITML_	ENSG00000174502|ENST00000367135|SLC26A9;nc|ENSG00000174502|Q7LBE3-2|SLC26A9;SLC26A9|p.T608Pfs*62|1|0.36|ENSG00000174502|chr1:205921800-205921800|G/-|frameshift_variant	37.81151784470057	0.569310847604193	6				NaN	NaN	0	NaN	6685	3162	9842
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9867	27.536	NaN	17143	30	0	2798.6	0.214	+			36000	SEHVKLEQL	9	77	541.7961282064671	1081.577703479734	2	541.796630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEHVKLEQL_	ARHGAP1|p.L237Cfs*135|2|0.38|ENSG00000175220|chr11:46680674-46680674|G/-|frameshift_variant;ARHGAP1|p.L237Rfs*135|1|0.37|ENSG00000175220|chr11:46680673-46680673|A/-|frameshift_variant;ENSG00000175220|ENST00000311956|ARHGAP1	150.36159442982594	0.006784847064083231	6				NaN	NaN	0	NaN	6700	3165	9866
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9868	27.54	NaN	15093	30	0	2184.6	0.106	+			38813	SSMVFTTSK	9	81	494.24439204293253	986.4742311526651	2	494.2445983886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSMVFTTSK_	ENSG00000112818|ENST00000230588|MEP1A	101.45984612302182	0.0377122763612125	6				NaN	NaN	0	NaN	6701	3165	9866
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9869	27.542	NaN	8467	30	0	2772	0.106	+			40384	STTVIGCVK	9	61	454.2488965455676	906.4832401579353	2	454.2495422363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STTVIGCVK_	ENSG00000189339|ENST00000617444|SLC35E2B;ENST00000481276.1_1_1:1602946-1608282:-|nuORF;nc|ENSG00000215790|P0CK97-2|SLC35E2A;nc|ENSG00000215790|P0CK97|SLC35E2A	54.776311868738084	0.25715957988447635	6				NaN	NaN	0	NaN	6702	3165	9866
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9870	27.544	NaN	3754.5	30	0	599.52	0.106	+			23544	LAKPAPQTL	9	68	469.7870700795555	937.5595872259111	2	469.7870178222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LAKPAPQTL_	ENSG00000065526|ENST00000375759|SPEN	32.81241826257853	0.4965981579233955	6				NaN	NaN	0	NaN	6703	3165	9866
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9871	27.546	NaN	2433.7	30	0	470.03	0.106	+			31734	QPAENVNQY	9	58	531.7462019872034	1061.4778510412068	2	531.7467651367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QPAENVNQY_	ENSG00000130985|ENST00000335972|UBA1;nc|ENSG00000130985|P22314-2|UBA1	71.87747018426188	0.13267044672804276	6				NaN	NaN	0	NaN	6704	3165	9866
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9872	27.547	NaN	3364.5	30	0	527.94	0.033	+			29641	PGIALSTGH	9	54	426.7316180699318	NaN	0	426.73150634765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PGIALSTGH_	ENST00000567728.1_1_16:50770494-50770695:-|nuORF	25.450171626174864	0.34907449758287085	6				NaN	NaN	0	NaN	6705	3165	9866
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9873	27.548	NaN	2385	30	0	388.94	0.141	+			47898	VSLKQVEKY	9	68	547.3161164934357	1092.6176800536714	2	547.3165893554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VSLKQVEKY_	ENSG00000183655|ENST00000337975|KLHL25;KLHL25|p.E514Gfs*5|1|0.18|ENSG00000183655|chr15:85768252-85768270|CGCGTCCACTGGTTGGTCT/-|frameshift_variant	76.16968421966216	0.11411088698345859	6				NaN	NaN	0	NaN	6706	3165	9866
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9891	27.587	NaN	11227	30	0	6553.5	0.214	+			2202	ALPTGSRAL	9	65	443.26115753328315	884.5077621333663	2	443.2609558105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ALPTGSRAL_	ENSG00000005810|ENST00000544440|MYCBP2;MYCBP2|p.N1867Tfs*9|1|0.15|ENSG00000005810|chr13:77171572-77171572|T/-|frameshift_variant;MYCBP2|p.N3049*|1|0.11|ENSG00000005810|chr13:77097894-77097895|TT/-|frameshift_variant;MYCBP2|p.P4047Qfs*26|2|0.35|ENSG00000005810|chr13:77067782-77067782|G/-|frameshift_variant;MYCBP2|p.T1507Ffs*24|1|0.04|ENSG00000005810|chr13:77185189-77185190|-/TTGTAAA|frameshift_variant;MYCBP2|p.T4311Pfs*37|1|0.14|ENSG00000005810|chr13:77059619-77059619|G/-|frameshift_variant;MYCBP2|p.V3749*|1|0.12|ENSG00000005810|chr13:77081486-77081486|C/-|frameshift_variant;nc|ENSG00000005810|O75592-2|MYCBP2	60.11826168202944	0.21262886028301267	6				NaN	NaN	0	NaN	6721	3168	9890
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9892	27.591	NaN	6291.8	30	0	1323	0.106	+			9854	EPVKSISSM	9	66	489.25216137712295	976.4897698210459	2	489.251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EPVKSISSM_	ENSG00000170345|ENST00000303562|FOS;nc|ENSG00000170345|P01100-2|FOS;nc|ENSG00000170345|P01100-3|FOS	68.78682469695295	0.14603441672067394	6				NaN	NaN	0	NaN	6722	3168	9890
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9893	27.593	NaN	6190.2	30	0	680.74	0.106	+			27627	MPPYPGPGH	9	64	476.7208161898326	951.4270794464652	2	476.7205505371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MPPYPGPGH_	ENSG00000171747|ENST00000307751|LGALS4	60.403631409065575	0.21025000616765316	6				NaN	NaN	0	NaN	6723	3168	9890
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9894	27.595	NaN	20201	30	0	4429.7	0.106	+			37988	SPILGNYR	8	73	460.25329997470084	918.4920470162017	2	461.25537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SPILGNYR_	LDOC1|p.D117N|1|0.18|ENSG00000182195|chrX:141176673-141176673|C/T|missense_variant	26.79610172149135	0.7524337208463756	6				NaN	NaN	0	NaN	6724	3168	9890
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9895	27.597	NaN	9835.4	30	0	2154.6	0.106	+			6058	AVMKDVVLIRK	11	75	424.6003747214419	1270.7792947645257	3	424.60015869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVMKDVVLIRK_	ENSG00000068654|ENST00000263857|POLR1A;ENST00000486964.5_1_2:86305209-86332944:-|nuORF	91.46909648831856	0.0927605832428752	6				NaN	NaN	0	NaN	6725	3168	9890
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9896	27.598	NaN	7494.4	30	0	923.93	0.035	+			46302	VEKEGIHVL	9	72	512.295272754713	1022.575992576226	2	512.29541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VEKEGIHVL_	chr1:31911841-31915895|139|19.5|0.0|20.89|-|0|None,PTP4A2|1;ENSG00000112245|ENST00000626021|PTP4A1;ENSG00000184007|ENST00000647444|PTP4A2;ENST00000484483.1_1_1:32381486-32384666:-|nuORF;nc|ENSG00000184007|Q12974-2|PTP4A2;nc|ENSG00000184007|Q12974-4|PTP4A2	109.43880257439609	0.029570636687953285	6				NaN	NaN	0	NaN	6726	3168	9890
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9897	27.599	NaN	3278.7	30	0	374.92	0.14	+			45697	VAAGSYQRF	9	60	499.7562905002275	997.4980280672551	2	499.7560119628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VAAGSYQRF_	ENSG00000160783|ENST00000368277|PMF1;nc|ENSG00000160783|Q6P1K2-3|PMF1;nc|ENSG00000160783|Q6P1K2-4|PMF1;nc|ENSG00000160783|Q6P1K2-5|PMF1;nc|ENSG00000160783|Q6P1K2-6|PMF1	101.25262130126117	0.03792372629710479	6				NaN	NaN	0	NaN	6727	3168	9890
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9915	27.638	NaN	91045	30	0	64852	0.214	+			288	AAPAYSRAL	9	67	460.25329997470084	918.4920470162017	2	460.2532043457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAPAYSRAL_	ENSG00000106211|ENST00000248553|HSPB1	87.69643885390035	0.07135982304947239	6				NaN	NaN	0	NaN	6742	3171	9914
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9916	27.642	NaN	18752	30	0	3842.6	0.106	+			33387	RIADIFVKK	9	79	363.8974670887715	1088.6705718665146	3	363.8974304199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RIADIFVKK_	ENSG00000180263|ENST00000343958|FGD6;ENST00000451107.3_1_12:95475298-95611245:-|nuORF;nc|ENSG00000180263|Q6ZV73-2|FGD6	56.632244143249146	0.24168844994051353	6				NaN	NaN	0	NaN	6743	3171	9914
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9917	27.644	NaN	14121	30	0	4404.8	0.106	+			29407	PATAHPAL	8	57	389.2165625316471	776.4185721300943	2	389.21624755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PATAHPAL_	ENST00000574902.5_1_16:3191344-3191665:+|nuORF	52.29916861842294	0.578018602984656	6				NaN	NaN	0	NaN	6744	3171	9914
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9918	27.646	NaN	10733	30	0	1703.7	0.106			+	37708	SLSSGLSAL	9	66	417.7320756061792	833.4495982791584	2	417.7319030761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLSSGLSAL_	REV__ENST00000530451.1_1_11:64889655-64897376:-|nuORF	82.30502934623384	0.08758161712619916	6				NaN	NaN	0	NaN	6745	3171	9914
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9919	27.648	NaN	4697.8	30	0	642.48	0.106	+			7764	DNWSVTNL	8	68	474.7246714185056	947.4347899038112	2	474.7243347167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DNWSVTNL_	sp|F5H9Z4|UL20_HCMVMMembraneproteinUL20OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL20PE=3SV=1	53.351449002276354	0.5676011784961348	6				NaN	NaN	0	NaN	6746	3171	9914
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9920	27.649	NaN	3876.3	30	0	1155.9	0.036	+			45430	TVYEEMMAK	9	64	559.2483645489929	1116.4821761647856	2	559.249267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_TVYEEMM(Oxidation (M))AK_	ENSG00000144659|ENST00000650617|SLC25A38;SLC25A38|p.G301V|1|0.09|ENSG00000144659|chr3:39396507-39396507|G/T|missense_variant	58.22992032128504	0.22837015374068087	6				NaN	NaN	0	NaN	6747	3171	9914
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9921	27.65	NaN	4702.1	30	0	436.12	0.14	+			50699	YEEQHPEL	8	60	522.7352952999566	1043.4560376667132	2	522.7357177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YEEQHPEL_	ENSG00000008517|ENST00000525643|IL32;nc|ENSG00000008517|P24001-3|IL32;nc|ENSG00000008517|P24001-4|IL32;nc|ENSG00000008517|P24001-5|IL32;nc|ENSG00000008517|P24001-6|IL32;nc|ENSG00000008517|P24001|IL32	60.11826168202944	0.5006107059937851	6				NaN	NaN	0	NaN	6748	3171	9914
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9939	27.688	NaN	27311	30	0	4172.8	0.214	+			10659	EYQKVGQSF	9	82	543.2669105981646	1084.519268263129	2	543.2671508789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EYQKVGQSF_	ENSG00000178996|ENST00000381410|SNX18;nc|ENSG00000178996|Q96RF0-3|SNX18;nc|ENSG00000178996|Q96RF0|SNX18	239.12644659286178	5.662358025253955E-19	6				NaN	NaN	0	NaN	6763	3174	9938
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9940	27.692	NaN	12350	30	0	2338.8	0.106	+			39874	STLPKSLLK	9	74	493.81600574602436	985.6174585588487	2	493.81573486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STLPKSLLK_	CKAP5|p.K1126Rfs*25|1|0.46|ENSG00000175216|chr11:46767609-46767609|T/-|frameshift_variant;CKAP5|p.V1971Lfs*42|1|0.03|ENSG00000175216|chr11:46744211-46744212|-/TTGAAAAAAAG|frameshift_variant;ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5	104.42354056486148	0.0346881550498418	6				NaN	NaN	0	NaN	6764	3174	9938
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9941	27.694	NaN	7279.6	30	0	906.2	0.106	+			12901	GESEKLVRL	9	76	515.798150744123	1029.5817485550458	2	515.7981567382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GESEKLVRL_	ENSG00000102781|ENST00000380615|KATNAL1;ENSG00000186625|ENST00000367411|KATNA1;ENST00000481905.5_1_6:149919348-149924475:-|nuORF;KATNAL1|p.P379Yfs*13|1|0.23|ENSG00000102781|chr13:30227424-30227425|-/TA|frameshift_variant;nc|ENSG00000186625|O75449-2|KATNA1	124.08010499294276	0.018729767491916592	6				NaN	NaN	0	NaN	6765	3174	9938
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9942	27.696	NaN	5064.6	30	0	716.76	0.106	+			45396	TVTTGVMGAV	10	71	476.2438602771909	NaN	0	476.24395751953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_TVTTGVM(Oxidation (M))GAV_	ENSG00000167676|ENST00000301286|PLIN4;PLIN4|p.A561Qfs*13|1|0.1|ENSG00000167676|chr19:4512237-4512237|C/-|frameshift_variant;PLIN4|p.G1001Afs*9|1|0.16|ENSG00000167676|chr19:4510916-4510916|C/-|frameshift_variant;PLIN4|p.G374Afs*35|1|0.53|ENSG00000167676|chr19:4512797-4512797|C/-|frameshift_variant	60.97194046774394	0.22634118066553113	6				NaN	NaN	0	NaN	6766	3174	9938
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9943	27.698	NaN	7285.9	30	0	2174	0.106	+			29062	NTIDPSHPM	9	71	506.2317977354613	1010.4490425377227	2	506.2322082519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NTIDPSHPM_	ENSG00000090861|ENST00000261772|AARS1;nc|ENSG00000090861|P49588-2|AARS1	93.19546047674547	0.05585629608842056	6				NaN	NaN	0	NaN	6767	3174	9938
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9944	27.699	NaN	9529.6	30	0	1556.8	0.036	+			17228	HVITKTMEL	9	81	536.2970119384371	1070.579470943674	2	536.2974853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HVITKTMEL_	ENSG00000153201|ENST00000283195|RANBP2;RANBP2|p.F3068Lfs*10|1|0.06|ENSG00000153201|chr2:108782692-108782692|T/-|frameshift_variant;RANBP2|p.H3114Sfs*18|1|0.33|ENSG00000153201|chr2:108782827-108782828|-/T|frameshift_variant	120.8684288430529	0.02067403653475984	6				NaN	NaN	0	NaN	6768	3174	9938
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9945	27.7	NaN	6636.4	30	0	1579.1	0.139	+			44633	TTFSPSISK	9	68	484.2588498854276	966.5031468376552	2	484.2586364746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TTFSPSISK_	ENST00000461208.5_1_3:47545925-47552697:-|nuORF;ENST00000483205.1_1_3:47551669-47552697:-|nuORF	51.19269402634007	0.2889735674168909	6				NaN	NaN	0	NaN	6769	3174	9938
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9963	27.739	NaN	5644.1	30	0	363.84	0.214	+			13764	GQFKDIITK	9	71	525.3043647201499	1048.5941765070997	2	525.3033447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GQFKDIITK_	ENSG00000070371|ENST00000427926|CLTCL1;ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000070371|P53675-2|CLTCL1;nc|ENSG00000141367|Q00610-2|CLTC	131.61620852596164	0.014413238321579053	6				NaN	NaN	0	NaN	6784	3177	9962
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9964	27.743	NaN	5202.6	30	0	844.16	0.106	+			47731	VSGEPLLAK	9	62	457.27098819884066	NaN	0	457.2710266113281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSGEPLLAK_	ENSG00000204104|ENST00000373327|TRAF3IP1;nc|ENSG00000204104|Q8TDR0-2|TRAF3IP1;TRAF3IP1|p.E258Rfs*5|2|0.24|ENSG00000204104|chr2:238329189-238329189|G/-|frameshift_variant	71.87747018426188	0.0992163553043454	6				NaN	NaN	0	NaN	6785	3177	9962
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9965	27.745	NaN	2994.4	30	0	554.12	0.106			+	39002	SSSFVTIEQ	9	56	499.2456896088956	996.4768262845912	2	499.24554443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSSFVTIEQ_	REV__ENSG00000116668|ENST00000367500|SWT1	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	6786	3177	9962
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9966	27.747	NaN	4069.4	30	0	605.28	0.106	+			1406	AEVTKVVV	8	55	422.76079625102	843.50703956884	2	422.7603454589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEVTKVVV_	ENSG00000167325|ENST00000300738|RRM1	69.6276240434122	0.4100012001731381	6				NaN	NaN	0	NaN	6787	3177	9962
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9967	27.749	NaN	6034.9	30	0	957.87	0.106			+	50182	WLLKLCLK	8	69	508.82109625962966	1015.6276395860593	2	508.82086181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_WLLKLCLK_	REV__ENST00000577142.1_1_17:79649546-79649603:-|nuORF	50.0245360154114	0.5941082100236891	6				NaN	NaN	0	NaN	6788	3177	9962
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9968	27.751	NaN	3540.2	30	0	427.73	0.034	+			45286	TVRESPATP	9	76	479.253960390733	956.4933678482661	2	479.25341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TVRESPATP_	ENSG00000143473|ENST00000271751|KCNH1;KCNH1|p.G827Afs*48|1|0.38|ENSG00000143473|chr1:210683771-210683771|C/-|frameshift_variant;KCNH1|p.V798I|2|0.43|ENSG00000143473|chr1:210683859-210683859|C/T|missense_variant;nc|ENSG00000143473|O95259-2|KCNH1	51.19269402634007	0.2889735674168909	6				NaN	NaN	0	NaN	6789	3177	9962
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9969	27.751	NaN	4888.9	30	0	563.68	0.139			+	-1	QDMVPLLL	8	65	472.76095121829366	NaN	0	472.77398681640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_QDM(Oxidation (M))VPLLL_	REV__EMC1|p.F974Lfs*4|1|0.22|ENSG00000127463|chr1:19219363-19219363|A/-|frameshift_variant;REV__ENSG00000127463|ENST00000477853|EMC1;REV__nc|ENSG00000127463|Q8N766-2|EMC1;REV__nc|ENSG00000127463|Q8N766-3|EMC1;REV__nc|ENSG00000127463|Q8N766-4|EMC1	50.0245360154114	1.7418937515398478	6				NaN	NaN	0	NaN	6790	3177	9962
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9987	27.79	NaN	26679	30	0	8640.9	0.214	+			40680	SVASPFTSK	9	71	462.24526090059254	922.4759688679851	2	462.2450256347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVASPFTSK_	ATP13A3|p.F1107Lfs*5|1|0.42|ENSG00000133657|chr3:194419960-194419960|A/-|frameshift_variant;ATP13A3|p.L1114Ffs*17|1|0.25|ENSG00000133657|chr3:194419939-194419940|-/A|frameshift_variant;ATP13A3|p.L1114Yfs*22|1|0.23|ENSG00000133657|chr3:194419940-194419940|A/-|frameshift_variant;ATP13A3|p.P1198Lfs*19|1|0.04|ENSG00000133657|chr3:194406007-194406008|-/ATATAGTA|frameshift_variant;ATP13A3|p.S1110Ffs*21|2|0.22|ENSG00000133657|chr3:194419952-194419953|-/A|frameshift_variant;ATP13A3|p.V1108Cfs*23|1|0.26|ENSG00000133657|chr3:194419959-194419960|-/A|frameshift_variant;ENSG00000127249|ENST00000342695|ATP13A4;ENSG00000133657|ENST00000645319|ATP13A3;ENSG00000187527|ENST00000342358|ATP13A5;nc|ENSG00000133657|Q9H7F0-2|ATP13A3;nc|ENSG00000133657|Q9H7F0|ATP13A3	78.26377905018397	0.10505600812668463	6				NaN	NaN	0	NaN	6805	3180	9986
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9988	27.794	NaN	15603	30	0	4599	0.106	+			48926	VVDQTTLMK	9	77	517.781068036633	1033.5475831400659	2	517.78125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVDQTTLMK_	ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;TRRAP-ASNS|1|fusion;TRRAP-ASNS|2|fusion;TRRAP|p.A1620Cfs*35|1|0.27|ENSG00000196367|chr7:98949499-98949500|-/G|frameshift_variant;TRRAP|p.I564Hfs*9|1|0.29|ENSG00000196367|chr7:98910389-98910390|-/G|frameshift_variant;TRRAP|p.K3443Sfs*19|1|0.28|ENSG00000196367|chr7:99004246-99004246|A/-|frameshift_variant;TRRAP|p.L291*|1|0.36|ENSG00000196367|chr7:98900691-98900691|T/-|frameshift_variant;TRRAP|p.P1292Lfs*17|1|0.44|ENSG00000196367|chr7:98933258-98933258|C/-|frameshift_variant;TRRAP|p.P1360Afs*14|1|0.05|ENSG00000196367|chr7:98935641-98935642|-/GCAAATAA|frameshift_variant	173.39201167336012	0.002187917786942103	6				NaN	NaN	0	NaN	6806	3180	9986
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9989	27.796	NaN	7179	30	0	1499.9	0.106	+			38999	SSSFPYTTK	9	68	509.24660775013604	1016.4786625670721	2	509.2469482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSSFPYTTK_	ENSG00000118689|ENST00000406360|FOXO3;nc|ENSG00000118689|O43524-2|FOXO3	51.19269402634007	0.2889735674168909	6				NaN	NaN	0	NaN	6807	3180	9986
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9990	27.798	NaN	7673.8	30	0	497.17	0.106			+	22113	KSNLKPLKN	9	79	521.3245256854133	1040.6344984376265	2	521.3248291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KSNLKPLKN_	REV__ENSG00000118503|ENST00000612899|TNFAIP3;REV__TNFAIP3|p.P457Afs*16|1|0.33|ENSG00000118503|chr6:137878807-137878808|-/G|frameshift_variant;REV__TNFAIP3|p.P457Lfs*20|1|0.49|ENSG00000118503|chr6:137878808-137878808|G/-|frameshift_variant;REV__TNFAIP3|p.Q415K|1|0.11|ENSG00000118503|chr6:137878688-137878688|C/A|missense_variant	71.87747018426188	0.13267044672804276	6				NaN	NaN	0	NaN	6808	3180	9986
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9991	27.8	NaN	3776	30	0	431.56	0.106	+			44090	TPTPGHIM	8	60	427.21520158339405	852.4158502335881	2	427.2151184082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TPTPGHIM_	ENSG00000115524|ENST00000335508|SF3B1;ENST00000468925.1_1_2:198272706-198273336:-|nuORF;SF3B1|p.F815Lfs*19|1|0.14|ENSG00000115524|chr2:197401451-197401451|A/-|frameshift_variant	60.29395666154354	0.49887135096048313	6				NaN	NaN	0	NaN	6809	3180	9986
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9992	27.802	NaN	11018	30	0	3533.1	0.034	+			45181	TVMNGALVK	9	65	466.76510828856533	931.5156636439307	2	466.76519775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TVMNGALVK_	ENSG00000131389|ENST00000622186|SLC6A6;SLC6A6|p.R601H|1|0.36|ENSG00000131389|chr3:14484946-14484946|G/A|missense_variant	77.31757898189308	0.1091473830098891	6				NaN	NaN	0	NaN	6810	3180	9986
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9993	27.802	NaN	2952.3	30	0	323.08	0.139	+			7413	DEKRINGI	8	64	472.76095121829366	NaN	0	472.7611389160156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DEKRINGI_	nc|ENSG00000120690|P32519-2|ELF1	55.50420428727701	1.7418937515398478	6				NaN	NaN	0	NaN	6811	3180	9986
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10011	27.839	NaN	31423	30	0	12550	0.214	+			43581	TIFGKIIRK	9	63	359.23770465945165	1074.691284578555	3	359.2377014160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TIFGKIIRK_	ENSG00000169567|ENST00000304043|HINT1	36.446750945000026	0.4619375763483977	6				NaN	NaN	0	NaN	6826	3183	10010
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10012	27.843	NaN	19801	30	0	10278	0.106			+	11730	FSERTIQLI	9	62	369.54504936396916	1105.6133186921074	3	369.544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FSERTIQLI_	REV__ENSG00000111790|ENST00000229395|FGFR1OP2;REV__nc|ENSG00000111790|Q9NVK5-2|FGFR1OP2	25.450171626174864	0.5654022654467333	6				NaN	NaN	0	NaN	6827	3183	10010
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10013	27.845	NaN	10262	30	0	1810.6	0.106	+			47693	VSEKTKLL	8	72	459.28685122517516	916.5591495171503	2	459.2867431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSEKTKLL_	CHAD|p.L142Cfs*42|1|0.29|ENSG00000136457|chr17:50468391-50468391|C/-|frameshift_variant;ENSG00000136457|ENST00000508540|CHAD	58.78195531508484	0.5138399468736706	6				NaN	NaN	0	NaN	6828	3183	10010
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10014	27.847	NaN	20465	30	0	2967.7	0.106	+			19907	KEFDGKSLV	9	81	511.77951691827303	1021.5444809033461	2	511.779541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEFDGKSLV_	ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;ENST00000517330.1_1_5:77337712-77337985:-|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P;nc|ENSG00000205940|Q58FF8|HSP90AB2P	117.5257442709337	0.022697614825424036	6				NaN	NaN	0	NaN	6829	3183	10010
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10015	27.849	NaN	5608.5	30	0	570.04	0.106	+			437	AAVDAGMAM	9	62	426.6829458550349	851.3513387768699	2	426.68304443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_AAVDAGM(Oxidation (M))AM_	ENSG00000011304|ENST00000356948|PTBP1;ENST00000586944.5_1_19:797434-805231:+|nuORF;nc|ENSG00000011304|P26599-1|PTBP1;nc|ENSG00000011304|P26599-2|PTBP1	88.64286706044652	0.06869153472052109	6				NaN	NaN	0	NaN	6830	3183	10010
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10016	27.85	NaN	10319	30	0	1313.7	0.106	+			16552	HEVRIQPSL	9	83	539.8035927569331	1077.592632580666	2	539.8036499023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HEVRIQPSL_	ENSG00000145868|ENST00000340253|FBXO38;ENST00000502571.1_1_5:147784249-147790417:+|nuORF;FBXO38|p.N697Kfs*44|1|0.3|ENSG00000145868|chr5:148427376-148427377|-/A|frameshift_variant;FBXO38|p.N697Tfs*32|1|0.21|ENSG00000145868|chr5:148427377-148427377|A/-|frameshift_variant;FBXO38|p.S849Afs*20|1|0.38|ENSG00000145868|chr5:148427834-148427834|G/-|frameshift_variant;nc|ENSG00000145868|Q6PIJ6-2|FBXO38;nc|ENSG00000145868|Q6PIJ6-3|FBXO38	98.58198989935565	0.04066992115528678	6				NaN	NaN	0	NaN	6831	3183	10010
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10017	27.852	NaN	4330.2	30	0	918.83	0.035	+			27601	MPNGDHIVSA	10	66	520.7454204242822	1039.4762879153643	2	520.745361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MPNGDHIVSA_	ENSG00000007168|ENST00000397195|PAFAH1B1;ENST00000572915.6_1_17:2573570-2586914:+|nuORF;nc|ENSG00000007168|P43034-2|PAFAH1B1	43.650786325866115	0.5155049133366767	6				NaN	NaN	0	NaN	6832	3183	10010
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10036	27.888	NaN	387970	30	0	54686	0.172	+			48203	VTAKELSLVNK	11	128	401.2433168010385	1200.7081210033155	3	401.2430725097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTAKELSLVNK_	ENSG00000050405|ENST00000341247|LIMA1;LIMA1|p.T536Lfs*38|2|0.4|ENSG00000050405|chr12:50177739-50177739|G/-|frameshift_variant;nc|ENSG00000050405|Q9UHB6-4|LIMA1	100.08592035916087	0.060509483168783906	6				NaN	NaN	0	NaN	6848	3186	10035
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10037	27.891	NaN	25221	30	0	19347	0.106				-1	 	0	46	343.1989675083007	684.3833820834014	2	343.1988525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6849	3186	10035
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10038	27.893	NaN	10599	30	0	2242.8	0.106	+			902	AEIAKAEL	8	71	422.7423507400173	843.4701485468346	2	422.7422180175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEIAKAEL_	ENSG00000116560|ENST00000357214|SFPQ;ENSG00000121390|ENST00000338910|PSPC1;nc|ENSG00000116560|P23246-2|SFPQ;nc|ENSG00000121390|Q8WXF1-2|PSPC1	112.41091882917199	0.2438316832735406	6				NaN	NaN	0	NaN	6850	3186	10035
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10039	27.895	NaN	6797	30	0	1158.1	0.106	+			46801	VHYAAGNVEA	10	72	515.7513008570629	1029.4880487809257	2	515.7516479492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VHYAAGNVEA_	sp|F5H9T4|UL09_HCMVMMembraneglycoproteinUL9OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL9PE=3SV=1;sp|P16745|UL09_HCMVAUncharacterizedproteinUL9OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL9PE=3SV=1	56.72105179125745	0.3956618550748046	6				NaN	NaN	0	NaN	6851	3186	10035
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10040	27.897	NaN	12130	30	0	3779.1	0.106			+	17944	IGNPTSSGAL	10	73	458.74035799020214	915.4661630472043	2	458.73980712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IGNPTSSGAL_	REV__ENSG00000145416|ENST00000514618|MARCHF1;REV__ENST00000512214.1_1_4:164506888-164533886:-|nuORF	90.60085204095205	0.12763388345653318	6				NaN	NaN	0	NaN	6852	3186	10035
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10041	27.898	NaN	8271.7	30	0	666.3	0.106	+			34496	RVFSWSQAK	9	79	554.7983206300011	1107.582088326802	2	554.799072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RVFSWSQAK_	ENST00000286692.8_1_1:111682258-111682414:-|nuORF	128.60217544463768	0.015992218256422188	6				NaN	NaN	0	NaN	6853	3186	10035
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10042	27.9	NaN	2429	30	0	526.13	0.036			+	-1	LCFTLVAPM	9	57	534.26904296875	NaN	0	534.26904296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C),Oxidation (M)	_LC(Carbamidomethyl (C))FTLVAPM(Oxidation (M))_	REV__ENSG00000169359|ENST00000643144|SLC33A1	31.954861631926434	0.3162336699109506	6				NaN	NaN	0	NaN	6854	3186	10035
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10061	27.936	NaN	9626.6	30	0	778.93	0.214	+			35254	SALHIAIEK	9	75	491.2894231808109	NaN	0	491.2893981933594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SALHIAIEK_	ENSG00000187688|ENST00000338560|TRPV2;TRPV2|p.I444Sfs*23|3|0.39|ENSG00000187688|chr17:16427521-16427521|G/-|frameshift_variant	83.6470233535746	0.058886874190800687	6				NaN	NaN	0	NaN	6870	3189	10060
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10062	27.94	NaN	4145.6	30	0	1309.3	0.106	+			8133	EAAAAALRRVR	11	62	395.2401585829043	NaN	0	395.24017333984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EAAAAALRRVR_	ENST00000400929.6_1_1:1198727-1209210:-|nuORF;ENST00000461142.3_1_1:1198606-1209210:-|nuORF	37.50817390946774	0.39825797133360086	6				NaN	NaN	0	NaN	6871	3189	10060
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10063	27.942	NaN	6116.7	30	0	1065.6	0.106	+			42403	TAKELSLVNK	10	76	551.8269456427928	1101.6393383523855	2	551.8273315429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TAKELSLVNK_	ENSG00000050405|ENST00000341247|LIMA1;LIMA1|p.T536Lfs*38|2|0.4|ENSG00000050405|chr12:50177739-50177739|G/-|frameshift_variant;nc|ENSG00000050405|Q9UHB6-4|LIMA1	159.33581866081465	0.006837894036646432	6				NaN	NaN	0	NaN	6872	3189	10060
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10064	27.944	NaN	4851.8	30	0	778.23	0.106	+			38659	SSINTLVTK	9	67	481.7791443761008	961.5437358190017	2	481.77880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSINTLVTK_	ENSG00000132254|ENST00000396777|ARFIP2;nc|ENSG00000132254|P53365-2|ARFIP2;nc|ENSG00000132254|P53365-3|ARFIP2	59.93077597824379	0.21419174904018318	6				NaN	NaN	0	NaN	6873	3189	10060
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10065	27.945	NaN	3892.8	30	0	342.22	0.106	+			42324	TAGAVTQCY	9	67	485.7185511996828	969.4225494661656	2	485.7185974121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_TAGAVTQC(Carbamidomethyl (C))Y_	ENSG00000105640|ENST00000222247|RPL18A	52.936696900407355	0.27249468807391813	6				NaN	NaN	0	NaN	6874	3189	10060
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10066	27.947	NaN	4297.1	30	0	1079.8	0.106	+			19342	KAKLDKGLE	9	75	501.3036314800337	1000.5927100268674	2	501.3029479980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KAKLDKGLE_	ENSG00000145901|ENST00000521591|TNIP1;nc|ENSG00000145901|Q15025-2|TNIP1;nc|ENSG00000145901|Q15025-3|TNIP1;nc|ENSG00000145901|Q15025-4|TNIP1;nc|ENSG00000145901|Q15025-5|TNIP1;nc|ENSG00000145901|Q15025-6|TNIP1;nc|ENSG00000145901|Q15025-7|TNIP1;nc|ENSG00000145901|Q15025-8|TNIP1	60.97194046774394	0.20551255781574032	6				NaN	NaN	0	NaN	6875	3189	10060
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10067	27.949	NaN	6553.5	30	0	1218.3	0.036	+			38090	SPTNTVHMY	9	67	525.2401417721911	1048.4657306111822	2	525.2396850585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SPTNTVHMY_	ENSG00000138592|ENST00000307179|USP8;nc|ENSG00000138592|P40818-2|USP8;USP8|p.K997Rfs*2|1|0.11|ENSG00000138592|chr15:50497178-50497178|A/-|frameshift_variant	104.0567914643314	0.03506238181059741	6				NaN	NaN	0	NaN	6876	3189	10060
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10085	27.987	NaN	11102	30	0	2408.2	0.214	+			39530	STFSAPLNK	9	66	482.7588059655796	NaN	0	482.7586975097656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STFSAPLNK_	ENSG00000163026|ENST00000295148|WDCP;nc|ENSG00000163026|Q9H6R7-2|WDCP	107.00750918261382	0.012399597248013027	6				NaN	NaN	0	NaN	6891	3192	10084
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10086	27.99	NaN	11795	30	0	3444.7	0.106				-1	TTASLMFCGR	10	61	381.8476849307209	1142.5212253923628	3	381.84783935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_TTASLMFC(Carbamidomethyl (C))GR_	nc|ENSG00000162755|Q8NEP7-2|KLHDC9	37.50817390946774	0.5721060100277453	6				NaN	NaN	0	NaN	6892	3192	10084
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10087	27.992	NaN	13195	30	0	2465.6	0.106	+			3060	ASFNAYENHLK	11	68	431.8789587623119	1292.6150468871358	3	431.8787536621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASFNAYENHLK_	ENSG00000173545|ENST00000308683|ZNF622	42.242577148874844	0.5272577467055767	6				NaN	NaN	0	NaN	6893	3192	10084
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10088	27.994	NaN	6904.2	30	0	1354.8	0.106			+	17414	IASKNVPV	8	61	414.2529028453604	826.4912527575208	2	414.25274658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IASKNVPV_	REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-10|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-13|TTN;REV__nc|ENSG00000155657|Q8WZ42-2|TTN;REV__nc|ENSG00000155657|Q8WZ42-3|TTN;REV__nc|ENSG00000155657|Q8WZ42-4|TTN;REV__nc|ENSG00000155657|Q8WZ42-5|TTN;REV__nc|ENSG00000155657|Q8WZ42-7|TTN;REV__nc|ENSG00000155657|Q8WZ42-8|TTN;REV__nc|ENSG00000155657|Q8WZ42-9|TTN;REV__nc|ENSG00000155657|Q8WZ42|TTN;REV__TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;REV__TTN|p.D20259Rfs*40|1|0.44|ENSG00000155657|chr2:178583105-178583106|-/T|frameshift_variant;REV__TTN|p.D21555Ifs*6|1|0.33|ENSG00000155657|chr2:178576659-178576659|G/-|frameshift_variant;REV__TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;REV__TTN|p.E20392Dfs*6|1|0.04|ENSG00000155657|chr2:178582357-178582358|-/TTTAAAATTA|frameshift_variant;REV__TTN|p.E20392Kfs*4|1|0.02|ENSG00000155657|chr2:178582359-178582360|-/TTTT|frameshift_variant;REV__TTN|p.G19920Afs*12|1|0.42|ENSG00000155657|chr2:178584961-178584961|G/-|frameshift_variant;REV__TTN|p.G22029Efs*22|2|0.13|ENSG00000155657|chr2:178575125-178575125|T/-|frameshift_variant;REV__TTN|p.I24998Nfs*2|1|0.35|ENSG00000155657|chr2:178566216-178566217|-/T|frameshift_variant;REV__TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;REV__TTN|p.K26626Nfs*34|1|0.34|ENSG00000155657|chr2:178561331-178561331|T/-|frameshift_variant;REV__TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;REV__TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;REV__TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant;REV__TTN|p.P22810Hfs*10|1|0.03|ENSG00000155657|chr2:178572780-178572781|-/AAAT|frameshift_variant;REV__TTN|p.V22573Cfs*4|2|0.31|ENSG00000155657|chr2:178573492-178573492|C/-|frameshift_variant;REV__TTN|p.V27442Cfs*4|1|0.05|ENSG00000155657|chr2:178558107-178558108|-/A|frameshift_variant	35.200714571348534	0.6875396545722289	6				NaN	NaN	0	NaN	6894	3192	10084
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10089	27.996	NaN	4518.4	30	0	994.01	0.106	+			35389	SAQGKPLAL	9	55	442.7637557831686	883.5129586331373	2	442.76361083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SAQGKPLAL_	ENSG00000100401|ENST00000356244|RANGAP1	72.87924865735499	0.12833875048249987	6				NaN	NaN	0	NaN	6895	3192	10084
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10090	27.998	NaN	3253.8	30	0	253.7	0.035			+	1013	AEKLFPSVV	9	75	495.28493775360266	988.5553225740053	2	495.28497314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEKLFPSVV_	REV__ARID5A|p.A461V|1|0.24|ENSG00000196843|chr2:96551910-96551910|C/T|missense_variant	51.33545320467046	0.2872990594074956	6				NaN	NaN	0	NaN	6896	3192	10084
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10091	27.998	NaN	1650.1	30	0	163.19	0.141	+			21693	KQFENPIIK	9	63	558.8241175567771	1115.633682180354	2	558.8251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KQFENPIIK_	ENSG00000075975|ENST00000170447|MKRN2;nc|ENSG00000075975|Q9H000-2|MKRN2	45.908116695636124	0.35095954387056183	6				NaN	NaN	0	NaN	6897	3192	10084
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10109	28.036	NaN	57909	30	0	15816	0.214	+			39470	STFDTQITK	9	85	520.7666541763189	1039.5187554194376	2	520.7666625976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STFDTQITK_	ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC;PRKDC|p.D2437Wfs*3|1|0.11|ENSG00000253729|chr8:47840161-47840162|-/CA|frameshift_variant;PRKDC|p.K3681Nfs*6|1|0.32|ENSG00000253729|chr8:47785174-47785177|TTCT/-|frameshift_variant;PRKDC|p.M3670*|1|0.5|ENSG00000253729|chr8:47785212-47785212|T/-|frameshift_variant;PRKDC|p.M3846Cfs*12|1|0.13|ENSG00000253729|chr8:47779047-47779047|T/-|frameshift_variant;PRKDC|p.M4020Cfs*2|1|0.31|ENSG00000253729|chr8:47776968-47776968|T/-|frameshift_variant;PRKDC|p.N3605Kfs*3|1|0.22|ENSG00000253729|chr8:47788993-47788994|-/T|frameshift_variant;PRKDC|p.N4037Ifs*15|1|0.17|ENSG00000253729|chr8:47776916-47776916|T/-|frameshift_variant;PRKDC|p.R2704Gfs*13|2|0.34|ENSG00000253729|chr8:47834238-47834238|T/-|frameshift_variant;PRKDC|p.S3402Ifs*16|1|0.04|ENSG00000253729|chr8:47799302-47799303|-/AAACCGTGAGTTAGAGGAGGTAA|frameshift_variant;PRKDC|p.S4099Qfs*6|1|0.25|ENSG00000253729|chr8:47774265-47774265|A/-|frameshift_variant;PRKDC|p.T3268Pfs*7|1|0.5|ENSG00000253729|chr8:47803426-47803426|T/-|frameshift_variant;PRKDC|p.W3401Cfs*4|1|0.01|ENSG00000253729|chr8:47799304-47799305|-/AATGAATA|frameshift_variant	253.04765968294507	5.977823884745978E-20	6				NaN	NaN	0	NaN	6912	3195	10108
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10110	28.039	NaN	24337	30	0	10375	0.106	+			33029	REIQTAVRL	9	84	543.3248196526057	1084.6350863720113	2	543.3251342773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_REIQTAVRL_	ENSG00000124635|ENST00000339812|H2BC11;ENSG00000146047|ENST00000274764|H2BC1;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;nc|ENSG00000203814|Q5QNW6-2|H2BC18	104.42354056486148	0.0346881550498418	6				NaN	NaN	0	NaN	6913	3195	10108
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10111	28.041	NaN	124140	30	0	40575	0.106	+			4448	ATILAGDVKVK	11	112	372.23256201520485	1113.6758566458145	3	372.2324523925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATILAGDVKVK_	ENSG00000119669|ENST00000238647|IRF2BPL;ENSG00000168264|ENST00000366609|IRF2BP2;nc|ENSG00000168264|Q7Z5L9-2|IRF2BP2;nc|ENSG00000168264|Q7Z5L9-3|IRF2BP2	118.23318122614258	0.023577246283422584	6				NaN	NaN	0	NaN	6914	3195	10108
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10112	28.043	NaN	11281	30	0	2376	0.106	+			39875	STLPKSLLK	9	72	493.81600574602436	985.6174585588487	2	493.8155212402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STLPKSLLK_	CKAP5|p.K1126Rfs*25|1|0.46|ENSG00000175216|chr11:46767609-46767609|T/-|frameshift_variant;CKAP5|p.V1971Lfs*42|1|0.03|ENSG00000175216|chr11:46744211-46744212|-/TTGAAAAAAAG|frameshift_variant;ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5	99.01295224348159	0.040209060045561164	6				NaN	NaN	0	NaN	6915	3195	10108
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10113	28.045	NaN	8126.4	30	0	1359.3	0.106	+			15865	GYGTHLMNHLK	11	79	424.2177649891711	1269.6314655677133	3	424.2177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GYGTHLMNHLK_	ENSG00000108773|ENST00000225916|KAT2A;ENSG00000114166|ENST00000263754|KAT2B;ENST00000468111.1_1_3:20168975-20187957:+|nuORF;nc|ENSG00000108773|Q92830-2|KAT2A	55.08391021199286	0.3673379875553588	6				NaN	NaN	0	NaN	6916	3195	10108
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10114	28.047	NaN	5168.1	30	0	463.02	0.034	+			18952	IVQASVSLK	9	67	472.79227454085765	943.5699961485153	2	472.79193115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IVQASVSLK_	ENSG00000103222|ENST00000399410|ABCC1;nc|ENSG00000103222|P33527-2|ABCC1;nc|ENSG00000103222|P33527-3|ABCC1;nc|ENSG00000103222|P33527-4|ABCC1;nc|ENSG00000103222|P33527-5|ABCC1;nc|ENSG00000103222|P33527-6|ABCC1;nc|ENSG00000103222|P33527-7|ABCC1;nc|ENSG00000103222|P33527-8|ABCC1;nc|ENSG00000103222|P33527-9|ABCC1	40.05817265558897	0.419577045485086	6				NaN	NaN	0	NaN	6917	3195	10108
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10115	28.047	NaN	3308.3	30	0	519.2	0.139			+	32564	QVVSMVKGL	9	57	488.779728519889	975.544904106578	2	488.7822570800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_QVVSM(Oxidation (M))VKGL_	REV__ENSG00000172534|ENST00000310441|HCFC1;REV__HCFC1|p.L913Wfs*11|1|0.39|ENSG00000172534|chrX:153956309-153956309|A/-|frameshift_variant;REV__HCFC1|p.P1894Lfs*22|1|0.06|ENSG00000172534|chrX:153950835-153950835|G/-|frameshift_variant;REV__nc|ENSG00000172534|P51610-2|HCFC1;REV__nc|ENSG00000172534|P51610-4|HCFC1	47.95952297671804	0.32689736945648856	6				NaN	NaN	0	NaN	6918	3195	10108
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10134	28.085	NaN	4766.1	30	0	1248.3	0.214	+			29063	NTIDPSHPM	9	70	506.2317977354613	1010.4490425377227	2	506.2317810058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NTIDPSHPM_	ENSG00000090861|ENST00000261772|AARS1;nc|ENSG00000090861|P49588-2|AARS1	66.42927471994793	0.16001998865088202	6				NaN	NaN	0	NaN	6934	3198	10133
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10135	28.089	NaN	9412.5	30	0	3329.2	0.106	+			17164	HTLDSYRILQK	11	84	458.58924209970655	1372.7458968993196	3	458.589111328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HTLDSYRILQK_	ENSG00000134574|ENST00000256996|DDB2;nc|ENSG00000134574|Q92466-2|DDB2;nc|ENSG00000134574|Q92466-3|DDB2;nc|ENSG00000134574|Q92466-5|DDB2	55.08391021199286	0.3673379875553588	6				NaN	NaN	0	NaN	6935	3198	10133
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10136	28.091	NaN	13094	30	0	2424.5	0.106	+			6416	AVVQTLVAK	9	64	464.79503582364276	927.5755187140855	2	464.79473876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVVQTLVAK_	ENSG00000165671|ENST00000439151|NSD1;nc|ENSG00000165671|Q96L73-2|NSD1;nc|ENSG00000165671|Q96L73-3|NSD1	134.7655990226056	0.012935733000282069	6				NaN	NaN	0	NaN	6936	3198	10133
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10137	28.093	NaN	8535.3	30	0	621.69	0.106			+	-1	KGTNKMWTK	9	73	555.2922955515104	1108.5700381698207	2	555.7940673828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_KGTNKM(Oxidation (M))WTK_	REV__ENSG00000144724|ENST00000474889|PTPRG;REV__nc|ENSG00000144724|P23470-2|PTPRG;REV__PTPRG|p.A885Efs*11|1|0.09|ENSG00000144724|chr3:62262891-62262892|-/AAACAAAGGAA|frameshift_variant;REV__PTPRG|p.E1273*|1|0.29|ENSG00000144724|chr3:62281605-62281606|-/TGAACTGT|frameshift_variant;REV__PTPRG|p.Q1315Sfs*12|1|0.24|ENSG00000144724|chr3:62282754-62282754|T/-|frameshift_variant	42.396135135203025	0.392153681582562	6				NaN	NaN	0	NaN	6937	3198	10133
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10138	28.095	NaN	5451.3	30	0	906.98	0.106	+			18108	ILAAIAGSVK	10	67	471.8027391155059	941.5909252978119	2	471.802490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ILAAIAGSVK_	ENSG00000135828|ENST00000367559|RNASEL;nc|ENSG00000135828|Q05823-2|RNASEL;RNASEL|p.A345Qfs*3|1|0.26|ENSG00000135828|chr1:182585774-182585774|C/-|frameshift_variant;RNASEL|p.F383Sfs*7|1|0.23|ENSG00000135828|chr1:182585661-182585661|C/-|frameshift_variant;RNASEL|p.M644*|2|0.18|ENSG00000135828|chr1:182576365-182576365|T/-|frameshift_variant;RNASEL|p.M644Nfs*3|2|0.29|ENSG00000135828|chr1:182576364-182576365|-/T|frameshift_variant;RNASEL|p.R651Kfs*11|2|0.31|ENSG00000135828|chr1:182576343-182576344|-/T|frameshift_variant	74.25504064058377	0.24255678544297835	6				NaN	NaN	0	NaN	6938	3198	10133
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10139	28.096	NaN	2441	30	0	308.84	0.036	+			25661	LRASWLRR	8	61	529.3217634794117	1056.6289740256234	2	529.322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LRASWLRR_	ENST00000255499.2_2_X:105969946-105970231:+|nuORF	36.446750945000026	0.6783611724927969	6				NaN	NaN	0	NaN	6939	3198	10133
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10140	28.097	NaN	4878.2	30	0	720.68	0.145	+			44690	TTIKAFFPKK	10	65	394.24135728106535	1179.702242443396	3	394.24127197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TTIKAFFPKK_	ENST00000510740.1_1_5:36668711-36725248:-|nuORF	40.05817265558897	0.5486090488315611	6				NaN	NaN	0	NaN	6940	3198	10133
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10158	28.136	NaN	11263	30	0	1080.5	0.214	+			30899	QEKSVFCRI	9	71	555.2922955515104	1108.5700381698207	2	555.2927856445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QEKSVFCRI_	ENSG00000179094|ENST00000317276|PER1;ENST00000579065.1_1_17:8052575-8052641:-|nuORF;nc|ENSG00000179094|O15534-4|PER1;PER1|p.A962Pfs*160|1|0.38|ENSG00000179094|chr17:8143454-8143454|C/-|frameshift_variant;PER1|p.L380Cfs*73|1|0.18|ENSG00000179094|chr17:8148093-8148093|G/-|frameshift_variant;PER1|p.L466*|1|0.14|ENSG00000179094|chr17:8147571-8147571|G/-|frameshift_variant	54.776311868738084	0.25715957988447635	6				NaN	NaN	0	NaN	6955	3201	10157
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10159	28.14	NaN	20627	30	0	3685.8	0.106	+			1703	AGVFVDATK	9	77	454.24810435407727	906.4816557749546	2	454.2475891113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AGVFVDATK_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	78.26377905018397	0.10505600812668463	6				NaN	NaN	0	NaN	6956	3201	10157
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10160	28.142	NaN	6529.9	30	0	700.05	0.106	+			728	AEAVSRVL	8	61	422.7478021226455	843.481051312091	2	422.7476501464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEAVSRVL_	ENSG00000177556|ENST00000313115|ATOX1	82.24051045832904	0.30490469762271794	6				NaN	NaN	0	NaN	6957	3201	10157
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10161	28.144	NaN	5960.1	30	0	711.39	0.106	+			34294	RTLGSDSVILK	11	72	594.8510654919248	1187.6875780506496	2	594.8512573242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RTLGSDSVILK_	ENST00000509320.5_1_14:73404720-73412622:+|nuORF	102.0615471778698	0.05642515548841253	6				NaN	NaN	0	NaN	6958	3201	10157
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10162	28.146	NaN	13684	30	0	1461.6	0.106	+			44122	TPYKGGNLY	9	79	506.7586635498139	1011.5027741664278	2	506.75823974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TPYKGGNLY_	ENSG00000144674|ENST00000361924|GOLGA4;nc|ENSG00000144674|Q13439-3|GOLGA4;nc|ENSG00000144674|Q13439-4|GOLGA4;nc|ENSG00000144674|Q13439-5|GOLGA4	74.25504064058377	0.12238981753128622	6				NaN	NaN	0	NaN	6959	3201	10157
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10163	28.148	NaN	2729.4	30	0	699.68	0.036	+			45431	TVYEEMMAK	9	67	559.2483764847907	1116.4822000363813	2	559.2490844726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_TVYEEMM(Oxidation (M))AK_	ENSG00000144659|ENST00000650617|SLC25A38;SLC25A38|p.G301V|1|0.09|ENSG00000144659|chr3:39396507-39396507|G/T|missense_variant	44.377184641726394	0.36891676396732553	6				NaN	NaN	0	NaN	6960	3201	10157
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10164	28.148	NaN	4951.1	30	0	725.88	0.141	+			40528	STYYNPSLK	9	68	536.7690346919068	NaN	0	536.7686767578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STYYNPSLK_	nc|ENSG00000211952|A0A0C4DH34|IGHV4-28;nc|ENSG00000211959|P01824|IGHV4-39;nc|ENSG00000231475|A0A087WSY4|IGHV4-30-2;nc|ENSG00000231475|P0DP07|IGHV4-31	35.15202426646627	0.3000918603816441	6				NaN	NaN	0	NaN	6961	3201	10157
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10182	28.188	NaN	17153	30	0	4576.2	0.214	+			34535	RVIDILRGK	9	68	357.2328435991956	1068.6767013977867	3	357.2327575683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVIDILRGK_	ENSG00000069399|ENST00000164227|BCL3	76.16968421966216	0.11411088698345859	6				NaN	NaN	0	NaN	6976	3204	10181
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10183	28.191	NaN	16979	30	0	3684.8	0.106	+			2689	AQNSVIIVDK	10	88	543.8113088618073	1085.6080647904146	2	543.8114013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AQNSVIIVDK_	ENSG00000072274|ENST00000360110|TFRC	100.81924332030881	0.07526389463299563	6				NaN	NaN	0	NaN	6977	3204	10181
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10184	28.193	NaN	9531.5	30	0	1924	0.106	+			13281	GIWKGAVAL	9	74	457.77671357954995	913.5388742258999	2	457.77386474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GIWKGAVAL_	ENSG00000197969|ENST00000360280|VPS13A;nc|ENSG00000197969|Q96RL7-2|VPS13A;nc|ENSG00000197969|Q96RL7-3|VPS13A;nc|ENSG00000197969|Q96RL7-4|VPS13A;VPS13A|p.I1709Nfs*6|1|0.34|ENSG00000197969|chr9:77318397-77318398|-/A|frameshift_variant;VPS13A|p.K1113Rfs*30|1|0.13|ENSG00000197969|chr9:77283645-77283645|A/-|frameshift_variant;VPS13A|p.M1697Cfs*13|1|0.07|ENSG00000197969|chr9:77318363-77318363|A/-|frameshift_variant;VPS13A|p.N2071Tfs*18|2|0.32|ENSG00000197969|chr9:77337367-77337367|A/-|frameshift_variant;VPS13A|p.T392Pfs*7|2|0.22|ENSG00000197969|chr9:77225933-77225933|A/-|frameshift_variant;VPS13A|p.Y2315Ifs*2|1|0.09|ENSG00000197969|chr9:77340463-77340463|T/-|frameshift_variant	60.29395666154354	0.21116425950210296	6				NaN	NaN	0	NaN	6978	3204	10181
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10185	28.195	NaN	8073.9	30	0	1049.7	0.106	+			40537	SVAALPVCK	9	70	472.7652593194428	943.5159657056856	2	472.76519775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_SVAALPVC(Carbamidomethyl (C))K_	ENSG00000007255|ENST00000585934|TRAPPC6A;nc|ENSG00000007255|O75865-2|TRAPPC6A	96.19043198914106	0.047412499214244314	6				NaN	NaN	0	NaN	6979	3204	10181
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10186	28.197	NaN	5580.6	30	0	914.71	0.106	+			34116	RSRTKTID	8	66	488.779728519889	975.544904106578	2	488.776611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RSRTKTID_	ENSG00000132382|ENST00000254718|MYBBP1A;nc|ENSG00000132382|Q9BQG0-2|MYBBP1A	39.252832667884924	0.6609488554722044	6				NaN	NaN	0	NaN	6980	3204	10181
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10187	28.199	NaN	9508	30	0	2209.7	0.035	+			16902	HPIRVVNAL	9	68	509.8115074500356	1017.6084619668712	2	509.8113708496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HPIRVVNAL_	ENSG00000120029|ENST00000370033|ARMH3;ENST00000470043.1_1_10:103792731-103793132:-|nuORF	60.11826168202944	0.21262886028301267	6				NaN	NaN	0	NaN	6981	3204	10181
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10188	28.199	NaN	3592.3	30	0	412.36	0.138	+			23505	LAGQATTAY	9	64	448.22939782562884	894.4442427180577	2	448.2292175292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LAGQATTAY_	ENSG00000019582|ENST00000009530|CD74;ENST00000517791.1_1_5:149786694-149792396:-|nuORF;ENST00000522153.1_1_5:149786338-149792312:-|nuORF;ENST00000523836.5_1_5:149785806-149792312:-|nuORF;nc|ENSG00000019582|P04233-2|CD74;nc|ENSG00000019582|P04233-3|CD74;nc|ENSG00000019582|P04233-4|CD74;nc|ENSG00000019582|P04233-5|CD74	85.16082228582465	0.07850854922700509	6				NaN	NaN	0	NaN	6982	3204	10181
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10206	28.239	NaN	139430	30	0	21222	0.17	+			3748	ATADLALGR	9	86	444.25087658869523	886.4872002441905	2	444.2506408691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATADLALGR_	ENSG00000172037|ENST00000305544|LAMB2;ENST00000469665.1_1_3:49160056-49160527:-|nuORF	171.53180478179638	0.0025054460641941692	6				NaN	NaN	0	NaN	6997	3207	10205
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10207	28.241	NaN	60712	30	0	6897.9	0.106	+			16168	HEAEVLKQL	9	94	533.7981246981789	1065.5816964631576	2	533.7984008789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HEAEVLKQL_	ENSG00000117632|ENST00000455785|STMN1;ENST00000465604.1_1_1:26227509-26228203:-|nuORF;ENST00000485226.1_1_1:26227942-26230296:-|nuORF;nc|ENSG00000117632|P16949-2|STMN1	148.98678547993487	0.0071052929883181565	6				NaN	NaN	0	NaN	6998	3207	10205
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10208	28.244	NaN	87529	30	0	7556.2	0.106	+			34636	RVQEAVESMVK	11	105	638.3395206045623	1274.6644882759244	2	638.33984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RVQEAVESMVK_	ENSG00000035141|ENST00000430566|FAM136A;ENST00000460307.1_1_2:70528513-70529143:-|nuORF;ENST00000498665.1_1_2:70527944-70529143:-|nuORF;nc|ENSG00000035141|Q96C01|FAM136A	152.69292282917763	6.602793133983423E-05	6				NaN	NaN	0	NaN	6999	3207	10205
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10209	28.245	NaN	5939.7	30	0	1011.6	0.106	+			43137	TESDTAVRL	9	71	496.2564103214846	990.4982677097693	2	496.2560119628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TESDTAVRL_	ENSG00000067900|ENST00000399799|ROCK1;ROCK1|p.I1150Nfs*5|1|0.23|ENSG00000067900|chr18:20959903-20959904|-/T|frameshift_variant;ROCK1|p.K1307Nfs*3|1|0.28|ENSG00000067900|chr18:20953718-20953718|T/-|frameshift_variant;ROCK1|p.K818Efs*6|1|0.51|ENSG00000067900|chr18:20984387-20984388|TT/-|frameshift_variant;ROCK1|p.N871Kfs*14|1|0.07|ENSG00000067900|chr18:20979951-20979952|-/T|frameshift_variant;ROCK1|p.N871Tfs*5|1|0.29|ENSG00000067900|chr18:20979952-20979952|T/-|frameshift_variant;ROCK1|p.P1257Lfs*3|1|0.21|ENSG00000067900|chr18:20954866-20954866|G/-|frameshift_variant	106.88024417677582	0.032181361622142884	6				NaN	NaN	0	NaN	7000	3207	10205
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10210	28.247	NaN	24547	30	0	12689	0.106				-1	LHRRCQRT	8	48	376.20507175183525	1125.5933858557057	3	376.2048645019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_LHRRC(Carbamidomethyl (C))QRT_	nc|ENSG00000134452|Q8NFZ0-2|FBH1	21.9598887501803	0.7897753010812679	6				NaN	NaN	0	NaN	7001	3207	10205
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10211	28.249	NaN	5957.7	30	0	3527.7	0.106			+	-1	HLLSGPPC	8	59	440.7209538670951	879.4273548009902	2	440.72076416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_HLLSGPPC(Carbamidomethyl (C))_	REV__ENSG00000120645|ENST00000538872|IQSEC3	37.028477286268924	0.6747514403204248	6				NaN	NaN	0	NaN	7002	3207	10205
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10212	28.251	NaN	4048.6	30	0	375.12	0.034	+			50042	WEICLSIV	8	60	481.75299011099696	961.491427288794	2	482.2603759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_WEICLSIV_	ENSG00000173372|ENST00000374642|C1QA	31.954861631926434	0.7126016770032289	6				NaN	NaN	0	NaN	7003	3207	10205
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10230	28.287	NaN	74796	30	0	8658	0.214	+			34637	RVQEAVESMVK	11	100	425.89554209477353	1274.6647968845207	3	425.89556884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVQEAVESMVK_	ENSG00000035141|ENST00000430566|FAM136A;ENST00000460307.1_1_2:70528513-70529143:-|nuORF;ENST00000498665.1_1_2:70527944-70529143:-|nuORF;nc|ENSG00000035141|Q96C01|FAM136A	123.11161354013207	0.014199556112152378	6				NaN	NaN	0	NaN	7018	3210	10229
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10231	28.29	NaN	13949	30	0	2386.4	0.106	+			18765	ITNDGATILK	10	67	523.2976224449752	1044.5806919567503	2	523.2984619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ITNDGATILK_	CCT4|p.T490Lfs*30|1|0.4|ENSG00000115484|chr2:61872105-61872105|T/-|frameshift_variant;ENSG00000115484|ENST00000394440|CCT4;ENSG00000120438|ENST00000321394|TCP1;ENST00000538128.5_2_6:160206507-160210586:-|nuORF;ENST00000543532.5_1_6:160205081-160210626:-|nuORF;ENST00000544255.5_1_6:160205081-160210586:-|nuORF;TCP1|p.A232Gfs*7|1|0.05|ENSG00000120438|chr6:159784043-159784044|-/C|frameshift_variant	180.09051358498644	0.001227893244234508	6				NaN	NaN	0	NaN	7019	3210	10229
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10232	28.293	NaN	34520	30	0	20371	0.106	+			15903	HAALETQTL	9	75	492.2613768682898	982.5082008033796	2	492.2611083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HAALETQTL_	ENSG00000176945|ENST00000447234|MUC20;ENST00000457750.1_1_3:195341833-195346985:+|nuORF;nc|ENSG00000176945|Q8N307-3|MUC20	118.74307786436346	0.02196067127630568	6				NaN	NaN	0	NaN	7020	3210	10229
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10233	28.294	NaN	9743.3	30	0	1919.2	0.106	+			35065	SAFGGSLPAK	10	67	467.753176705685	933.49180047817	2	467.7528991699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SAFGGSLPAK_	ENSG00000147874|ENST00000380502|HAUS6;HAUS6|p.S530Vfs*12|1|0.3|ENSG00000147874|chr9:19063049-19063049|T/-|frameshift_variant;nc|ENSG00000147874|Q7Z4H7-2|HAUS6;nc|ENSG00000147874|Q7Z4H7-3|HAUS6	79.48907831485694	0.19979514868675113	6				NaN	NaN	0	NaN	7021	3210	10229
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10234	28.296	NaN	10730	30	0	4404.9	0.106	+			27253	MERLVMTKL	9	61	398.8786907327692	1193.6142427985076	3	398.87890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term),2 Oxidation (M)	_(Acetyl (Protein N-term))M(Oxidation (M))ERLVM(Oxidation (M))TKL_	ENST00000521971.5_1_8:104432683-104438302:+|nuORF	72.87924865735499	0.12833875048249987	6				NaN	NaN	0	NaN	7022	3210	10229
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10235	28.298	NaN	6119.4	30	0	632.12	0.042			+	26174	LSRFENHRRQI	11	62	485.9350449501027	1454.7833054505081	3	485.9349365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSRFENHRRQI_	REV__ENSG00000173588|ENST00000397809|CEP83	37.50817390946774	0.5920388381045607	6				NaN	NaN	0	NaN	7023	3210	10229
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10236	28.299	NaN	3967.1	30	0	225.73	0.14	+			44695	TTINKWLW	8	65	531.2922543354628	1060.5699557377254	2	531.2923583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TTINKWLW_	tr|U7SH34|U7SH34_FUSNUAGCSfamilyalanineorglycine:cationsymporterOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02311PE=3SV=1	55.50420428727701	0.5462892107279674	6				NaN	NaN	0	NaN	7024	3210	10229
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10254	28.337	NaN	41698	30	0	6298.3	0.207	+			28055	NAAQTSVAY	9	81	462.72567440661567	923.4367958800314	2	462.7244567871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAAQTSVAY_	ENSG00000113643|ENST00000231572|RARS1;nc|ENSG00000113643|P54136-2|RARS1	112.41091882917199	0.026537921851008135	6				NaN	NaN	0	NaN	7039	3213	10253
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10255	28.34	NaN	94448	30	0	23471	0.106	+			35888	SEERFRPSL	9	93	560.7903231157147	1119.5660932982294	2	560.7911987304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEERFRPSL_	CTNNA1|p.K493Nfs*31|1|0.19|ENSG00000044115|chr5:138917827-138917827|A/-|frameshift_variant;CTNNA1|p.T832*|1|0.29|ENSG00000044115|chr5:138933859-138933862|CAGA/-|frameshift_variant;ENSG00000044115|ENST00000302763|CTNNA1;ENST00000522730.1_1_5:138160461-138163428:+|nuORF;nc|ENSG00000044115|P35221-2|CTNNA1	96.0336014099291	0.047854655524928534	6				NaN	NaN	0	NaN	7040	3213	10253
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10256	28.342	NaN	18017	30	0	4504	0.106	+			25233	LNDTARIY	8	80	483.25691860982204	964.4992842864441	2	483.2560119628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LNDTARIY_	ENSG00000115850|ENST00000264162|LCT	68.78682469695295	0.41700713582915416	6				NaN	NaN	0	NaN	7041	3213	10253
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10257	28.344	NaN	23744	30	0	4927.9	0.106	+			40548	SVAAPITVR	9	81	457.2764788519919	NaN	0	457.2764892578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVAAPITVR_	ENSG00000170242|ENST00000527733|USP47;nc|ENSG00000170242|Q96K76-2|USP47;nc|ENSG00000170242|Q96K76|USP47;USP47|p.G1121Efs*22|2|0.29|ENSG00000170242|chr11:11948505-11948505|A/-|frameshift_variant	37.50817390946774	0.28819615062043347	6				NaN	NaN	0	NaN	7042	3213	10253
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10258	28.346	NaN	10704	30	0	3173.4	0.106	+			44182	TQTQFFHVK	9	75	379.20146298673103	1134.582559560393	3	379.20123291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TQTQFFHVK_	ENSG00000163564|ENST00000368140|PYHIN1;ENSG00000163565|ENST00000295809|IFI16;ENST00000485134.1_1_1:158911778-158914889:+|nuORF;ENST00000493884.5_1_1:158984458-159022017:+|nuORF;nc|ENSG00000163564|Q6K0P9-2|PYHIN1;nc|ENSG00000163564|Q6K0P9-3|PYHIN1;nc|ENSG00000163564|Q6K0P9-4|PYHIN1;nc|ENSG00000163565|Q16666-2|IFI16;nc|ENSG00000163565|Q16666-3|IFI16;nc|ENSG00000163565|Q16666-6|IFI16;nc|ENSG00000163565|Q16666-8|IFI16	78.26377905018397	0.10505600812668463	6				NaN	NaN	0	NaN	7043	3213	10253
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10259	28.348	NaN	11858	30	0	2968.6	0.106			+	3268	ASLPAALGK	9	76	414.2529028453604	826.4912527575208	2	414.2528076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASLPAALGK_	REV__nc|ENSG00000183578|Q5GJ75|TNFAIP8L3	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	7044	3213	10253
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10260	28.35	NaN	13784	30	0	1206.3	0.038	+			27251	MERIMKAQAL	10	80	595.8226119623151	1189.6306709914302	2	595.822998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MERIMKAQAL_	ENSG00000080824|ENST00000216281|HSP90AA1;ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000378770.1_1_4:190394307-190396341:+|nuORF;ENST00000506915.1_1_4:190395906-190396341:+|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000205100|Q58FG1|HSP90AA4P	95.4829727501206	0.09968275784893506	6				NaN	NaN	0	NaN	7045	3213	10253
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10278	28.386	NaN	8355.6	30	0	1190.5	0.214			+	37719	SLSVSHTSF	9	66	482.740053101795	963.46555327039	2	482.7400207519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLSVSHTSF_	REV__ENSG00000214787|ENST00000651255|MS4A4E;REV__nc|ENSG00000214787|Q96PG1-3|MS4A4E	45.9519527083369	0.35044536499095585	6				NaN	NaN	0	NaN	7060	3216	10277
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10279	28.389	NaN	10756	30	0	1958.7	0.106	+			35727	SDLSKGVL	8	77	409.73467106085184	817.4547891885037	2	409.7343444824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SDLSKGVL_	ENSG00000168763|ENST00000305510|CNNM3;nc|ENSG00000168763|Q8NE01-2|CNNM3;nc|ENSG00000168763|Q8NE01-3|CNNM3	125.81401957644128	0.2262431007506538	6				NaN	NaN	0	NaN	7061	3216	10277
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10280	28.391	NaN	3283.3	30	0	449.89	0.106	+			39405	STDPNSVFR	9	64	511.7488131578182	1021.4830733824364	2	511.7488098144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STDPNSVFR_	ENSG00000113240|ENST00000316308|CLK4;ENST00000519132.5_1_5:178032378-178044013:-|nuORF;ENST00000519583.5_1_5:178030620-178044013:-|nuORF;ENST00000520878.5_1_5:178030620-178044471:-|nuORF;ENST00000522136.5_1_5:178032355-178045581:-|nuORF	60.11826168202944	0.21262886028301267	6				NaN	NaN	0	NaN	7062	3216	10277
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10281	28.393	NaN	2657.4	30	0	459.95	0.106	+			13292	GKAFCAGG	8	43	355.6680247359085	709.321496538617	2	355.6680603027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GKAFCAGG_	ENSG00000198130|ENST00000359678|HIBCH;nc|ENSG00000198130|Q6NVY1-2|HIBCH	5.08689130490037	0.7762486542322466	6				NaN	NaN	0	NaN	7063	3216	10277
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10282	28.395	NaN	3194.8	30	0	590.33	0.106	+			44436	TSLVGCQVI	9	64	488.76035880038853	975.5061646675771	2	488.7601013183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_TSLVGC(Carbamidomethyl (C))QVI_	CLTCL1|p.H915Ifs*56|1|0.35|ENSG00000070371|chr22:19221430-19221430|G/-|frameshift_variant;CLTCL1|p.M473Ifs*76|1|0.05|ENSG00000070371|chr22:19233268-19233269|-/TCGG|frameshift_variant;CLTCL1|p.P253Sfs*7|1|0.11|ENSG00000070371|chr22:19239313-19239314|-/A|frameshift_variant;CLTCL1|p.T738Qfs*24|1|0.03|ENSG00000070371|chr22:19223971-19223972|-/TTCTG|frameshift_variant;ENSG00000070371|ENST00000427926|CLTCL1;nc|ENSG00000070371|P53675-2|CLTCL1	55.50420428727701	0.2510918378945873	6				NaN	NaN	0	NaN	7064	3216	10277
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10283	28.397	NaN	5422.1	30	0	827.32	0.035	+			9286	EHLLKDNK	8	74	498.77652419242395	995.5384954516479	2	498.77081298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EHLLKDNK_	tr|U7SYC5|U7SYC5_FUSNUCarbamoylphosphatesynthaselargechainOS=FusobacteriumnucleatumCTI-5OX=1316586GN=carBPE=3SV=1	49.44154591367651	0.597725784090933	6				NaN	NaN	0	NaN	7065	3216	10277
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10284	28.397	NaN	4411.4	30	0	645.72	0.139				-1	QMTTVKNK	8	64	483.25691860982204	964.4992842864441	2	484.7554931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_QM(Oxidation (M))TTVKNK_	ENST00000483182.5_1_1:38478406-38483425:+|nuORF	35.61828744233558	0.6843154725607303	6				NaN	NaN	0	NaN	7066	3216	10277
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10302	28.437	NaN	30994	30	0	2698.7	0.214	+			25685	LRGVDDSY	8	99	462.72567440661567	923.4367958800314	2	463.22918701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LRGVDDSY_	CHSY1|p.G651Vfs*14|1|0.08|ENSG00000131873|chr15:101177845-101177846|-/A|frameshift_variant;CHSY1|p.P223Lfs*3|1|0.31|ENSG00000131873|chr15:101235232-101235232|C/-|frameshift_variant;ENSG00000131873|ENST00000254190|CHSY1	37.15910966729921	0.6739408393984688	6				NaN	NaN	0	NaN	7081	3219	10301
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10303	28.44	NaN	14038	30	0	2433.2	0.106				-1	 	0	66	437.2103313359568	436.20305486935683	1	437.210205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7082	3219	10301
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10304	28.442	NaN	8784.6	30	0	2869.4	0.106	+			4562	ATLEETLVKK	10	59	377.8923225682566	1130.6551383049698	3	377.8920593261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATLEETLVKK_	ENSG00000254093|ENST00000314787|PINX1	40.05817265558897	0.5486090488315611	6				NaN	NaN	0	NaN	7083	3219	10301
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10305	28.444	NaN	8909.6	30	0	3802.1	0.106	+			31298	QIGPAPPLK	9	70	460.78173373538044	919.5489145375609	2	460.7815246582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QIGPAPPLK_	CAD|p.N1541Mfs*15|1|0.33|ENSG00000084774|chr2:27237773-27237773|A/-|frameshift_variant;ENSG00000084774|ENST00000264705|CAD	71.29570347882199	0.13518600952103718	6				NaN	NaN	0	NaN	7084	3219	10301
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10306	28.446	NaN	4981.7	30	0	697.69	0.106				-1	QVNICGCPL	9	70	530.7492405149302	1059.4839280966603	2	530.7496948242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C)	_QVNIC(Carbamidomethyl (C))GC(Carbamidomethyl (C))PL_	ENST00000296575.7_1_4:145567307-145567847:+|nuORF	40.5726180659479	0.4135428067754104	6				NaN	NaN	0	NaN	7085	3219	10301
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10307	28.448	NaN	3541.9	30	0	414.04	0.033	+			47700	VSEVTQAL	8	57	423.73203471579245	845.4495164983849	2	423.731689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VSEVTQAL_	ENST00000528087.1_1_11:67120378-67120948:-|nuORF	82.30502934623384	0.30436709589983096	6				NaN	NaN	0	NaN	7086	3219	10301
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10308	28.448	NaN	2563.5	30	0	259.72	0.14	+			3818	ATAIDIATSK	10	58	495.77665848027743	NaN	0	495.7765197753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATAIDIATSK_	ENSG00000165868|ENST00000369209|HSPA12A	43.650786325866115	0.3457431322078509	6				NaN	NaN	0	NaN	7087	3219	10301
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10326	28.488	NaN	19131	30	0	3215.2	0.214	+			16480	HETRLVEI	8	85	498.77652419242395	995.5384954516479	2	498.7767028808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HETRLVEI_	ENSG00000160789|ENST00000368300|LMNA;nc|ENSG00000160789|P02545-2|LMNA;nc|ENSG00000160789|P02545-3|LMNA;nc|ENSG00000160789|P02545-4|LMNA;nc|ENSG00000160789|P02545-5|LMNA;nc|ENSG00000160789|P02545-6|LMNA	87.69643885390035	0.28444366722805053	6				NaN	NaN	0	NaN	7102	3222	10325
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10327	28.491	NaN	18045	30	0	2499.5	0.106	+			41788	SVSQAVFAR	9	79	482.7641354652878	963.5137179973756	2	482.76385498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVSQAVFAR_	ENSG00000119042|ENST00000417098|SATB2;ENST00000483346.2_1_2:200213306-200233427:-|nuORF;nc|ENSG00000119042|Q9UPW6-2|SATB2	126.24258497203832	0.01742065577488747	6				NaN	NaN	0	NaN	7103	3222	10325
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10328	28.494	NaN	10425	30	0	4391.7	0.106			+	46531	VEYRGQAAY	9	72	528.7589805749104	1055.5034082166208	2	528.7593994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VEYRGQAAY_	REV__ENSG00000137171|ENST00000347162|KLC4;REV__ENST00000467906.5_1_6:43030654-43039600:+|nuORF;REV__nc|ENSG00000137171|Q9NSK0-3|KLC4;REV__nc|ENSG00000137171|Q9NSK0-4|KLC4;REV__nc|ENSG00000137171|Q9NSK0-5|KLC4	63.30626980617807	0.18605348971131092	6				NaN	NaN	0	NaN	7104	3222	10325
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10329	28.495	NaN	3387	30	0	671.75	0.106	+			38611	SSGQAVFLK	9	61	468.76121791770356	935.5078829022071	2	468.76092529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSGQAVFLK_	ENST00000544662.1_1_12:132413858-132416816:+|nuORF	65.46538089061403	0.16805504838372562	6				NaN	NaN	0	NaN	7105	3222	10325
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10330	28.497	NaN	4172.4	30	0	452.8	0.106			+	37237	SKSGVQSGR	9	69	453.24513032022276	904.4757077072455	2	453.24530029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SKSGVQSGR_	REV__ENST00000284110.1_1_17:13505023-13505188:-|nuORF	47.95952297671804	0.32689736945648856	6				NaN	NaN	0	NaN	7106	3222	10325
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10331	28.499	NaN	3668.8	30	0	340.68	0.035	+			45408	TVVGKEKLL	9	69	493.81600574602436	985.6174585588487	2	493.81561279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TVVGKEKLL_	tr|U7SJJ8|U7SJJ8_FUSNUDNA3'-5'helicaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02077PE=3SV=1	35.15202426646627	0.4747332964206883	6				NaN	NaN	0	NaN	7107	3222	10325
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10332	28.5	NaN	11318	30	0	1629.6	0.139	+			48237	VTCPGVVLK	9	79	486.78188682760873	971.5492207220175	2	486.7806701660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_VTC(Carbamidomethyl (C))PGVVLK_	ENSG00000132122|ENST00000371847|SPATA6;ENST00000463938.5_1_1:48878802-48937680:-|nuORF;nc|ENSG00000132122|Q9NWH7-2|SPATA6	84.9155231211612	0.07920012719736333	6				NaN	NaN	0	NaN	7108	3222	10325
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10350	28.535	NaN	77164	30	0	29963	0.214				-1	 	0	86	385.8769720663857	1154.609086799357	3	385.8766784667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7123	3225	10349
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10351	28.539	NaN	10060	30	0	1946.4	0.106	+			2066	ALANVSIEK	9	78	472.77489558011166	943.5352382270233	2	472.7738342285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ALANVSIEK_	ENSG00000129083|ENST00000439561|COPB1	98.58198989935565	0.04066992115528678	6				NaN	NaN	0	NaN	7124	3225	10349
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10352	28.541	NaN	5965.4	30	0	956.76	0.106	+			37299	SLCSVSIEK	9	61	511.7627909467167	1021.5110289602334	2	511.7629089355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SLC(Carbamidomethyl (C))SVSIEK_	ENSG00000065534|ENST00000360304|MYLK;ENST00000504946.5_1_3:123400948-123419770:-|nuORF;nc|ENSG00000065534|Q15746-11|MYLK;nc|ENSG00000065534|Q15746-2|MYLK;nc|ENSG00000065534|Q15746-3|MYLK;nc|ENSG00000065534|Q15746-4|MYLK;nc|ENSG00000065534|Q15746-5|MYLK;nc|ENSG00000065534|Q15746-6|MYLK;nc|ENSG00000065534|Q15746-7|MYLK	60.11826168202944	0.21262886028301267	6				NaN	NaN	0	NaN	7125	3225	10349
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10353	28.542	NaN	5444.8	30	0	610.5	0.106	+			17289	IADAAYKAM	9	71	477.2406245569511	952.4666961807022	2	477.24114990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IADAAYKAM_	ENSG00000176658|ENST00000318217|MYO1D	93.1432384553994	0.056003526918089595	6				NaN	NaN	0	NaN	7126	3225	10349
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10354	28.544	NaN	3330.7	30	0	340.64	0.106	+			34400	RTSGSVYITLK	11	73	612.8510728848527	1223.6875928365052	2	612.8511962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RTSGSVYITLK_	ENSG00000140319|ENST00000267884|SRP14;ENST00000558243.1_1_15:40330963-40331317:-|nuORF;ENST00000558527.5_1_15:40329525-40331317:-|nuORF;ENST00000559475.5_1_15:40329218-40331146:-|nuORF	82.83050618871818	0.12877585057862004	6				NaN	NaN	0	NaN	7127	3225	10349
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10355	28.546	NaN	3639	30	0	493.44	0.106			+	10487	EVRVYVGPR	9	75	537.8062847610668	1073.5980165889334	2	537.8068237304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EVRVYVGPR_	REV__ENST00000565049.1_1_16:33499109-33500962:-|nuORF	66.96192283764107	0.15557981141143568	6				NaN	NaN	0	NaN	7128	3225	10349
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10356	28.548	NaN	12829	30	0	4303.7	0.034	+			7302	DASGAKLDY	9	76	470.2252532102516	938.4359534873032	2	470.22412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DASGAKLDY_	BZW1|p.N285Tfs*11|2|0.26|ENSG00000082153|chr2:200818782-200818782|A/-|frameshift_variant;BZW1|p.N286*|1|0.04|ENSG00000082153|chr2:200818790-200818791|-/T|frameshift_variant;BZW1|p.S325Rfs*19|1|0.04|ENSG00000082153|chr2:200819989-200819990|-/ACAATATAGAA|frameshift_variant;ENSG00000082153|ENST00000409600|BZW1;ENST00000464483.1_1_2:201677931-201680272:+|nuORF;nc|ENSG00000082153|Q7L1Q6-2|BZW1;nc|ENSG00000082153|Q7L1Q6-3|BZW1;nc|ENSG00000082153|Q7L1Q6-4|BZW1	138.06239232086	0.011389075116295402	6				NaN	NaN	0	NaN	7129	3225	10349
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10374	28.584	NaN	36987	30	0	7962.4	0.214	+			49209	VVMVNQGLTK	10	82	544.8093780539085	1087.604203174617	2	544.8106689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVMVNQGLTK_	ENSG00000134057|ENST00000256442|CCNB1	180.09051358498644	0.001227893244234508	6				NaN	NaN	0	NaN	7144	3228	10373
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10375	28.588	NaN	5017.7	30	0	581.87	0.106				-1	RMLVKVMH	8	67	515.2879837824668	1028.5614146317334	2	515.2879638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_RMLVKVM(Oxidation (M))H_	ENSG00000270379|ENST00000604834|HEATR9;nc|ENSG00000270379|A2RTY3-3|HEATR9;nc|ENSG00000270379|A2RTY3-4|HEATR9;nc|ENSG00000270379|A2RTY3-5|HEATR9	44.53106598305862	0.628196326904373	6				NaN	NaN	0	NaN	7145	3228	10373
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10376	28.59	NaN	6731.2	30	0	652.54	0.106	+			13725	GQAEIIITK	9	78	486.7894799675008	971.5644070018017	2	486.78857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GQAEIIITK_	ENSG00000174306|ENST00000683867|ZHX3;nc|ENSG00000174306|Q9H4I2-2|ZHX3;ZHX3|p.L445Sfs*3|1|0.19|ENSG00000174306|chr20:41203584-41203584|G/-|frameshift_variant	81.52500206392136	0.09095445986635249	6				NaN	NaN	0	NaN	7146	3228	10373
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10377	28.592	NaN	8052.6	30	0	3266.3	0.106	+			16620	HGTVVALRY	9	75	508.28777913827184	1014.5610053433437	2	508.2878723144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HGTVVALRY_	ENSG00000110013|ENST00000263593|SIAE;nc|ENSG00000110013|Q9HAT2-2|SIAE	104.74654710444128	0.034358562718640136	6				NaN	NaN	0	NaN	7147	3228	10373
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10378	28.594	NaN	2967.3	30	0	592.63	0.106			+	23950	LDRNPGGLG	9	57	449.7402253613513	897.4658977895026	2	449.7406311035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LDRNPGGLG_	REV__ENSG00000188493|ENST00000378313|ACTMAP	44.116797842482775	0.37197099687881774	6				NaN	NaN	0	NaN	7148	3228	10373
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10379	28.595	NaN	6310.7	30	0	3949.9	0.035			+	-1	GESLLRMW	8	43	336.5040836276171	1006.4904214830513	3	336.50421142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_GESLLRM(Oxidation (M))W_	REV__nc|ENSG00000019485|Q9NQV5-2|PRDM11;REV__nc|ENSG00000019485|Q9NQV5|PRDM11	18.324413293986947	0.7971860551947066	6				NaN	NaN	0	NaN	7149	3228	10373
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10380	28.596	NaN	3473.7	30	0	220.13	0.139			+	26870	LWHPQLGE	8	73	490.253407763675	978.49226259415	2	490.73736572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LWHPQLGE_	REV__ENSG00000270765|ENST00000604641|GAS2L2;REV__nc|ENSG00000270765|Q8NHY3-2|GAS2L2	31.954861631926434	0.7126016770032289	6				NaN	NaN	0	NaN	7150	3228	10373
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10398	28.634	NaN	33696	30	0	10498	0.214	+			48839	VVAVGRAL	8	53	392.7557936632273	783.4970343932546	2	392.75543212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVAVGRAL_	ENSG00000167986|ENST00000301764|DDB1;ENST00000414411.3_1_11:61081295-61081943:-|nuORF	92.19062340807069	0.27083854825242376	6				NaN	NaN	0	NaN	7165	3231	10397
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10399	28.638	NaN	8343	30	0	2459.5	0.106	+			4224	ATGDIYAMK	9	63	485.23922074267097	968.463888552142	2	485.23895263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATGDIYAMK_	ENSG00000122966|ENST00000392521|CIT;nc|ENSG00000122966|O14578-2|CIT;nc|ENSG00000122966|O14578|CIT	124.08010499294276	0.018729767491916592	6				NaN	NaN	0	NaN	7166	3231	10397
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10400	28.64	NaN	33827	30	0	12200	0.106	+			5326	ATVLYIVKK	9	67	345.5584043576707	1033.6533836732121	3	345.558349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATVLYIVKK_	ENSG00000113734|ENST00000351486|BNIP1;nc|ENSG00000113734|Q12981-1|BNIP1;nc|ENSG00000113734|Q12981-2|BNIP1;nc|ENSG00000113734|Q12981-3|BNIP1	93.1432384553994	0.056003526918089595	6				NaN	NaN	0	NaN	7167	3231	10397
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10401	28.642	NaN	9313.9	30	0	1377.7	0.106	+			16388	HENIVIAKM	9	75	527.7891878614	1053.5638227896	2	527.78955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HENIVIAKM_	ENSG00000185624|ENST00000331483|P4HB	101.45984612302182	0.0377122763612125	6				NaN	NaN	0	NaN	7168	3231	10397
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10402	28.643	NaN	7358.1	30	0	1690.9	0.106	+			18374	IQSTVMLDK	9	69	517.7811824527791	NaN	0	517.7810668945312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IQSTVMLDK_	ENSG00000115415|ENST00000361099|STAT1;nc|ENSG00000115415|P42224-2|STAT1;STAT1|p.D534Mfs*14|1|0.24|ENSG00000115415|chr2:190980653-190980653|G/-|frameshift_variant;STAT1|p.K567Nfs*25|2|0.2|ENSG00000115415|chr2:190979798-190979798|T/-|frameshift_variant	79.48907831485694	0.07313446400987221	6				NaN	NaN	0	NaN	7169	3231	10397
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10403	28.645	NaN	4437.9	30	0	2017.6	0.033			+	13387	GLDGCFIR	8	48	440.7209538670951	879.4273548009902	2	440.72064208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GLDGCFIR_	REV__ENSG00000126254|ENST00000262633|RBM42;REV__nc|ENSG00000126254|Q9BTD8-2|RBM42;REV__nc|ENSG00000126254|Q9BTD8-3|RBM42;REV__nc|ENSG00000126254|Q9BTD8-4|RBM42	33.51558372728122	0.7005509609380386	6				NaN	NaN	0	NaN	7170	3231	10397
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10404	28.646	NaN	8921.9	30	0	4743.3	0.141	+			16787	HPARDYVVL	9	73	535.293043490622	1068.571534048044	2	535.2933959960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HPARDYVVL_	ENSG00000164741|ENST00000276297|DLC1;nc|ENSG00000164741|Q96QB1-1|DLC1;nc|ENSG00000164741|Q96QB1-4|DLC1;nc|ENSG00000164741|Q96QB1-6|DLC1	56.43379154798735	0.2433427591689151	6				NaN	NaN	0	NaN	7171	3231	10397
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10422	28.685	NaN	272210	30	0	69270	0.163	+			4621	ATLNSIVAK	9	93	458.77655748875395	915.5385620443079	2	458.7763366699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATLNSIVAK_	ENSG00000007944|ENST00000356840|MYLIP;MYLIP|p.K199Rfs*26|1|0.07|ENSG00000007944|chr6:16143150-16143151|-/GAATT|frameshift_variant;MYLIP|p.R317Kfs*8|1|0.09|ENSG00000007944|chr6:16145014-16145015|-/A|frameshift_variant	186.41076107051632	0.0006524797715399015	6				NaN	NaN	0	NaN	7186	3234	10421
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10423	28.688	NaN	16685	30	0	7882.3	0.106	+			17608	IEGTKAVLE	9	65	480.27413449213753	958.5337160510751	2	480.2737731933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IEGTKAVLE_	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-6|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42|TTN;TTN|p.A12650Gfs*4|1|0.4|ENSG00000155657|chr2:178633489-178633490|-/T|frameshift_variant;TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;TTN|p.A7105Cfs*8|1|0.32|ENSG00000155657|chr2:178722523-178722524|-/A|frameshift_variant;TTN|p.D20259Rfs*40|1|0.44|ENSG00000155657|chr2:178583105-178583106|-/T|frameshift_variant;TTN|p.D21555Ifs*6|1|0.33|ENSG00000155657|chr2:178576659-178576659|G/-|frameshift_variant;TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;TTN|p.D9026Afs*9|1|0.26|ENSG00000155657|chr2:178711205-178711208|CTGT/-|frameshift_variant;TTN|p.E15132Sfs*22|1|0.27|ENSG00000155657|chr2:178612094-178612094|C/-|frameshift_variant;TTN|p.E20392Dfs*6|1|0.04|ENSG00000155657|chr2:178582357-178582358|-/TTTAAAATTA|frameshift_variant;TTN|p.E20392Kfs*4|1|0.02|ENSG00000155657|chr2:178582359-178582360|-/TTTT|frameshift_variant;TTN|p.E9224Gfs*8|1|0.04|ENSG00000155657|chr2:178709697-178709698|-/TCTTATGATATCTTGAC|frameshift_variant;TTN|p.F18705Lfs*8|1|0.37|ENSG00000155657|chr2:178590687-178590687|A/-|frameshift_variant;TTN|p.G12742Vfs*2|1|0.05|ENSG00000155657|chr2:178632983-178632983|C/-|frameshift_variant;TTN|p.G14712Dfs*11|1|0.37|ENSG00000155657|chr2:178614341-178614341|G/-|frameshift_variant;TTN|p.G19920Afs*12|1|0.42|ENSG00000155657|chr2:178584961-178584961|G/-|frameshift_variant;TTN|p.G22029Efs*22|2|0.13|ENSG00000155657|chr2:178575125-178575125|T/-|frameshift_variant;TTN|p.I10495Nfs*4|1|0.37|ENSG00000155657|chr2:178685288-178685289|-/T|frameshift_variant;TTN|p.I24998Nfs*2|1|0.35|ENSG00000155657|chr2:178566216-178566217|-/T|frameshift_variant;TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;TTN|p.I3592Lfs*36|1|0.25|ENSG00000155657|chr2:178741508-178741508|T/-|frameshift_variant;TTN|p.I9225Cfs*34|1|0.06|ENSG00000155657|chr2:178709695-178709696|-/ATATCCATGAGCA|frameshift_variant;TTN|p.K10923Rfs*104|2|0.23|ENSG00000155657|chr2:178679362-178679362|T/-|frameshift_variant;TTN|p.K11381Nfs*25|1|0.07|ENSG00000155657|chr2:178671133-178671133|T/-|frameshift_variant;TTN|p.K11556Sfs*15|1|0.39|ENSG00000155657|chr2:178652287-178652287|T/-|frameshift_variant;TTN|p.K14271Qfs*5|1|0.02|ENSG00000155657|chr2:178617351-178617352|-/G|frameshift_variant;TTN|p.K26626Nfs*34|1|0.34|ENSG00000155657|chr2:178561331-178561331|T/-|frameshift_variant;TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;TTN|p.K4988Ifs*4|1|0.06|ENSG00000155657|chr2:178733381-178733382|-/GAAAATGATG|frameshift_variant;TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant;TTN|p.L7142*|1|0.06|ENSG00000155657|chr2:178722407-178722411|TCTTA/-|frameshift_variant;TTN|p.M4154Nfs*4|1|0.21|ENSG00000155657|chr2:178739821-178739822|-/T|frameshift_variant;TTN|p.N13487Tfs*49|1|0.34|ENSG00000155657|chr2:178621335-178621335|T/-|frameshift_variant;TTN|p.N15496Ifs*16|1|0.09|ENSG00000155657|chr2:178610116-178610116|T/-|frameshift_variant;TTN|p.N6458Mfs*74|1|0.44|ENSG00000155657|chr2:178725998-178725998|T/-|frameshift_variant;TTN|p.N7648Tfs*27|1|0.32|ENSG00000155657|chr2:178719598-178719598|T/-|frameshift_variant;TTN|p.N8964Tfs*27|1|0.11|ENSG00000155657|chr2:178711988-178711988|T/-|frameshift_variant;TTN|p.P16126Rfs*3|1|0.25|ENSG00000155657|chr2:178607301-178607302|TG/-|frameshift_variant;TTN|p.P22810Hfs*10|1|0.03|ENSG00000155657|chr2:178572780-178572781|-/AAAT|frameshift_variant;TTN|p.P4036Qfs*14|1|0.19|ENSG00000155657|chr2:178740175-178740175|G/-|frameshift_variant;TTN|p.S2859Qfs*30|1|0.21|ENSG00000155657|chr2:178770127-178770127|G/-|frameshift_variant;TTN|p.S5235Hfs*25|1|0.06|ENSG00000155657|chr2:178732315-178732316|-/ATATATG|frameshift_variant;TTN|p.T4116Sfs*25|1|0.04|ENSG00000155657|chr2:178739937-178739938|-/CTATTATATATGAGGAA|frameshift_variant;TTN|p.V10632Yfs*16|1|0.16|ENSG00000155657|chr2:178683254-178683254|T/-|frameshift_variant;TTN|p.V11008Sfs*13|1|0.33|ENSG00000155657|chr2:178678146-178678147|-/T|frameshift_variant;TTN|p.V11345Ffs*4|1|0.4|ENSG00000155657|chr2:178672044-178672044|T/-|frameshift_variant;TTN|p.V13823*|1|0.28|ENSG00000155657|chr2:178620027-178620027|C/-|frameshift_variant;TTN|p.V22573Cfs*4|2|0.31|ENSG00000155657|chr2:178573492-178573492|C/-|frameshift_variant;TTN|p.V27442Cfs*4|1|0.05|ENSG00000155657|chr2:178558107-178558108|-/A|frameshift_variant;TTN|p.W5728Mfs*3|1|0.07|ENSG00000155657|chr2:178730267-178730268|-/T|frameshift_variant	90.60085204095205	0.06317133949006545	6				NaN	NaN	0	NaN	7187	3234	10421
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10424	28.69	NaN	5711	30	0	812.83	0.106	+			49553	VYASDRATF	9	69	515.2538261541504	1028.4930993751007	2	515.25390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYASDRATF_	ENSG00000198721|ENST00000380118|ECI2;ENST00000380120.6_1_6:4116110-4130812:-|nuORF;ENST00000464057.5_1_6:4116110-4125894:-|nuORF;ENST00000464583.5_1_6:4119386-4125894:-|nuORF;ENST00000496241.6_1_6:4116110-4130478:-|nuORF;nc|ENSG00000198721|O75521-2|ECI2	65.46538089061403	0.16805504838372562	6				NaN	NaN	0	NaN	7188	3234	10421
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10425	28.692	NaN	3378.4	30	0	1471	0.106	+			30633	QASSAAFRY	9	59	500.746262159745	999.47797138629	2	500.7457580566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QASSAAFRY_	ENSG00000054965|ENST00000356467|FAM168A;FAM168A|p.Y123Tfs*89|2|0.29|ENSG00000054965|chr11:73411475-73411475|G/-|frameshift_variant;nc|ENSG00000054965|Q92567|FAM168A	40.05817265558897	0.419577045485086	6				NaN	NaN	0	NaN	7189	3234	10421
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10426	28.694	NaN	8625.8	30	0	559.19	0.106	+			49210	VVMVNQGLTK	10	85	544.8093780539085	1087.604203174617	2	545.30859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVMVNQGLTK_	ENSG00000134057|ENST00000256442|CCNB1	35.17822180527639	0.5925517082438457	6				NaN	NaN	0	NaN	7190	3234	10421
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10427	28.695	NaN	6407.2	30	0	2294	0.106			+	47049	VLFDAQSLFHI	11	68	430.5675659902241	1288.6808685708725	3	430.5673828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VLFDAQSLFHI_	REV__ENSG00000033170|ENST00000673929|FUT8;REV__nc|ENSG00000033170|Q9BYC5-3|FUT8;REV__nc|ENSG00000033170|Q9BYC5-4|FUT8	35.17822180527639	0.6208003396870814	6				NaN	NaN	0	NaN	7191	3234	10421
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10428	28.697	NaN	5253.3	30	0	1204.6	0.034	+			4222	ATGDFVTVK	9	65	469.2528051249646	936.4910573167292	2	469.2525634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATGDFVTVK_	AASDH|p.L440Gfs*15|1|0.11|ENSG00000157426|chr4:56354103-56354104|AA/-|frameshift_variant;ENSG00000157426|ENST00000205214|AASDH;ENST00000503808.5_1_4:57204874-57250274:-|nuORF;nc|ENSG00000157426|Q4L235-2|AASDH;nc|ENSG00000157426|Q4L235-3|AASDH;nc|ENSG00000157426|Q4L235-4|AASDH	42.86426827375447	0.38666266728046506	6				NaN	NaN	0	NaN	7192	3234	10421
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10446	28.735	NaN	8954.7	30	0	1045.4	0.214	+			36071	SEKAKDLIL	9	83	508.8031017005414	1015.5916504678828	2	508.8031005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEKAKDLIL_	ENSG00000112079|ENST00000229812|STK38;ENSG00000211455|ENST00000389032|STK38L;ENST00000536093.5_3_12:27468169-27475385:+|nuORF;nc|ENSG00000211455|Q9Y2H1-2|STK38L;STK38|p.F382Lfs*70|1|0.16|ENSG00000112079|chr6:36497806-36497806|A/-|frameshift_variant;STK38L|p.F383Lfs*9|1|0.1|ENSG00000211455|chr12:27319392-27319392|T/-|frameshift_variant	61.691277971877994	0.19951612995419254	6				NaN	NaN	0	NaN	7207	3237	10445
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10447	28.738	NaN	5397.6	30	0	1015	0.106	+			28195	NASKGIYAM	9	70	477.7394794195898	NaN	0	477.7391357421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NASKGIYAM_	ENSG00000142945|ENST00000372224|KIF2C;nc|ENSG00000142945|Q99661-2|KIF2C	71.87747018426188	0.0992163553043454	6				NaN	NaN	0	NaN	7208	3237	10445
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10448	28.74	NaN	5067.9	30	0	499.2	0.106	+			51178	YPGQPHPAL	9	60	490.253407763675	978.49226259415	2	490.2530822753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YPGQPHPAL_	ENSG00000114315|ENST00000232424|HES1	73.97473282117947	0.12360187025703594	6				NaN	NaN	0	NaN	7209	3237	10445
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10449	28.742	NaN	5862.9	30	0	2596.9	0.106			+	-1	RSGSRAPLCRA	11	50	410.8874552848881	1229.6405364548643	3	410.8873596191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_RSGSRAPLC(Carbamidomethyl (C))RA_	REV__ENST00000586847.1_1_18:77794393-77797276:+|nuORF	21.0322348234405	0.7691802065814517	6				NaN	NaN	0	NaN	7210	3237	10445
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10450	28.744	NaN	2907.8	30	0	928.23	0.106	+			18232	INNTCFYTKNG	11	55	425.53357228517416	1273.5788874557225	3	425.5334777832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_INNTCFYTKNG_	ENSG00000010017|ENST00000011619|RANBP9;nc|ENSG00000010017|Q96S59-3|RANBP9	26.749707702089633	0.7092085788826945	6				NaN	NaN	0	NaN	7211	3237	10445
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10451	28.746	NaN	3293.3	30	0	312.36	0.033	+			26525	LTQMVGKP	8	64	437.24661636998644	NaN	0	437.25506591796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LTQMVGKP_	ENSG00000175595|ENST00000311895|ERCC4;ERCC4|p.K632Nfs*3|1|0.14|ENSG00000175595|chr16:13937846-13937846|A/-|frameshift_variant	47.91560031466742	1.7418937515398478	6				NaN	NaN	0	NaN	7212	3237	10445
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10452	28.746	NaN	2788.1	30	0	451.95	0.139			+	48078	VSSTSGMSLA	10	64	470.2252532102516	938.4359534873032	2	470.73089599609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VSSTSGMSLA_	REV__nc|ENSG00000171608|O00329-2|PIK3CD	47.657333605630114	0.47858658696240314	6				NaN	NaN	0	NaN	7213	3237	10445
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10470	28.786	NaN	7127.7	30	0	463.07	0.214	+			7783	DPEGSRITY	9	69	519.2487446858181	1036.4829364384361	2	519.249267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DPEGSRITY_	ENSG00000124596|ENST00000424266|OARD1;ENST00000465893.1_1_6:41037763-41039373:-|nuORF	150.36159442982594	0.006784847064083231	6				NaN	NaN	0	NaN	7228	3240	10469
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10471	28.789	NaN	4478.8	30	0	405.1	0.106			+	50292	WSGRAVRL	8	70	472.77489558011166	943.5352382270233	2	472.779541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WSGRAVRL_	REV__ENSG00000088766|ENST00000378863|CRLS1	49.44154591367651	0.597725784090933	6				NaN	NaN	0	NaN	7229	3240	10469
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10472	28.791	NaN	3284.9	30	0	258.73	0.106	+			23292	KYMQKSLEL	9	67	570.3104990321598	1138.6064451311195	2	570.3102416992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KYMQKSLEL_	ENSG00000163728|ENST00000296015|TTC14;nc|ENSG00000163728|Q96N46-2|TTC14;TTC14|p.D534Gfs*2|1|0.04|ENSG00000163728|chr3:180609828-180609829|-/G|frameshift_variant	98.62937762414208	0.04060045538121712	6				NaN	NaN	0	NaN	7230	3240	10469
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10473	28.793	NaN	4480.5	30	0	1764.8	0.106				-1	LVVLRFMTM	9	42	375.87615241337323	1124.6066278403198	3	375.87689208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_LVVLRFM(Oxidation (M))TM_	ENSG00000171303|ENST00000302909|KCNK3;KCNK3|p.G276Vfs*52|1|0.29|ENSG00000171303|chr2:26728206-26728206|G/-|frameshift_variant	27.882242232435846	0.5426732730940306	6				NaN	NaN	0	NaN	7231	3240	10469
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10474	28.795	NaN	2746.6	30	0	955.44	0.106			+	9877	EQIEAQQQK	9	65	551.2781839814979	1100.5418150297958	2	551.280029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EQIEAQQQK_	REV__ENSG00000109881|ENST00000328697|CCDC34;REV__ENST00000529615.1_1_11:27359677-27371953:-|nuORF	51.19269402634007	0.2889735674168909	6				NaN	NaN	0	NaN	7232	3240	10469
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10475	28.797	NaN	12508	30	0	3957.2	0.033	+			43567	TIAPALVSK	9	68	450.28135010346136	898.5481472737227	2	450.2813415527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TIAPALVSK_	ENO1|p.D318Mfs*5|1|0.43|ENSG00000074800|chr1:8864006-8864006|C/-|frameshift_variant;ENSG00000074800|ENST00000234590|ENO1;ENST00000464920.1_1_1:8921421-8930582:-|nuORF	58.22992032128504	0.22837015374068087	6				NaN	NaN	0	NaN	7233	3240	10469
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10476	28.797	NaN	3843.9	30	0	432.21	0.137	+			47415	VPPHGGGAL	9	47	402.7219783517722	803.4294037703444	2	402.7218017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VPPHGGGAL_	ENSG00000204301|ENST00000375023|NOTCH4;ENST00000491215.1_1_6:32163216-32164008:-|nuORF;nc|ENSG00000204301|Q99466-2|NOTCH4	39.021493756699265	0.43173687394350213	6				NaN	NaN	0	NaN	7234	3240	10469
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10494	28.837	NaN	20442	30	0	3364.4	0.214	+			42367	TAIGMPVEK	9	80	473.257322491188	944.500092049176	2	473.2571105957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAIGMPVEK_	ENSG00000109736|ENST00000355443|MFSD10;ENST00000509676.1_1_4:2934766-2935650:-|nuORF;MFSD10|p.S111Gfs*48|1|0.44|ENSG00000109736|chr4:2933125-2933147|GGGCGCCTCCCCAAGCAGTCAGA/-|frameshift_variant	61.691277971877994	0.19951612995419254	6				NaN	NaN	0	NaN	7249	3243	10493
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10495	28.84	NaN	6512	30	0	1505.9	0.106	+			19367	KALEAVFGK	9	67	481.7869997790814	961.5594466249628	2	481.7867431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KALEAVFGK_	ENSG00000147274|ENST00000320676|RBMX;ENST00000565907.1_1_X:135961433-135961586:-|nuORF;ENST00000567262.5_1_X:135958813-135961586:-|nuORF;nc|ENSG00000147274|P38159-2|RBMX;nc|ENSG00000147274|P38159-3|RBMX	61.691277971877994	0.19951612995419254	6				NaN	NaN	0	NaN	7250	3243	10493
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10496	28.842	NaN	6777.4	30	0	979.33	0.106			+	-1	IGLAQCVL	8	65	437.24661636998644	NaN	0	437.2467956542969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_IGLAQC(Carbamidomethyl (C))VL_	REV__ENSG00000109927|ENST00000392793|TECTA;REV__TECTA|p.D2032Gfs*22|1|0.13|ENSG00000109927|chr11:121187922-121187923|-/G|frameshift_variant	62.97842346883844	1.7418937515398478	6				NaN	NaN	0	NaN	7251	3243	10493
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10497	28.844	NaN	2900	30	0	600.51	0.106	+			2244	ALTFRSAKGRW	11	50	431.57853001119975	1291.7137606337992	3	431.5783386230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ALTFRSAKGRW_	ENSG00000089163|ENST00000202967|SIRT4;SIRT4|p.N144Kfs*52|1|0.49|ENSG00000089163|chr12:120303988-120303989|-/A|frameshift_variant	19.1035232394073	0.7810393085260824	6				NaN	NaN	0	NaN	7252	3243	10493
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10498	28.846	NaN	4340.9	30	0	317.57	0.106	+			36094	SEKFIKAAI	9	70	503.8007803134977	1005.5870076937954	2	503.80047607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SEKFIKAAI_	ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A;TOP2A|p.K1199Efs*11|1|0.23|ENSG00000131747|chr17:40396408-40396409|-/C|frameshift_variant;TOP2A|p.T1205Hfs*19|4|0.35|ENSG00000131747|chr17:40396390-40396390|T/-|frameshift_variant	90.60085204095205	0.06317133949006545	6				NaN	NaN	0	NaN	7253	3243	10493
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10499	28.848	NaN	2810.2	30	0	279.32	0.036	+			34687	RVTDIIMQK	9	64	552.3157053080027	1102.6168576828054	2	552.3161010742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RVTDIIMQK_	ENSG00000139116|ENST00000361418|KIF21A;KIF21A|p.L1270Sfs*13|1|0.12|ENSG00000139116|chr12:39318174-39318175|-/G|frameshift_variant;KIF21A|p.P1541Lfs*6|1|0.27|ENSG00000139116|chr12:39303074-39303074|G/-|frameshift_variant;nc|ENSG00000139116|Q7Z4S6-2|KIF21A;nc|ENSG00000139116|Q7Z4S6-3|KIF21A;nc|ENSG00000139116|Q7Z4S6-4|KIF21A;nc|ENSG00000139116|Q7Z4S6-5|KIF21A;nc|ENSG00000139116|Q7Z4S6-6|KIF21A	68.84614121027924	0.14577793175421136	6				NaN	NaN	0	NaN	7254	3243	10493
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10500	28.848	NaN	3827.2	30	0	1021.2	0.139			+	-1	EAAEACVPGA	10	64	487.7160044111059	973.4174558890119	2	487.7159118652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_EAAEAC(Carbamidomethyl (C))VPGA_	REV__nc|ENSG00000107959|Q5JRX3-3|PITRM1	53.351449002276354	0.42630798468005626	6				NaN	NaN	0	NaN	7255	3243	10493
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10518	28.887	NaN	86850	30	0	27232	0.191	+			39009	SSSGFVAIK	9	78	448.2478967559418	894.4812405786836	2	448.2475891113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSSGFVAIK_	ENSG00000198478|ENST00000369838|SH3BGRL2;SH3BGRL2|p.P55Rfs*41|2|0.28|ENSG00000198478|chr6:79673727-79673727|C/-|frameshift_variant	176.08678752253132	0.0017279326439731339	6				NaN	NaN	0	NaN	7270	3246	10517
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10519	28.89	NaN	12190	30	0	1195.9	0.106	+			4098	ATDPNILGR	9	75	478.7616586165136	955.5087642998272	2	478.7613525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATDPNILGR_	ENSG00000253729|ENST00000314191|PRKDC;ENST00000536483.1_1_8:48686736-48691238:-|nuORF;nc|ENSG00000253729|P78527-2|PRKDC	72.87924865735499	0.12833875048249987	6				NaN	NaN	0	NaN	7271	3246	10517
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10520	28.892	NaN	26814	30	0	6255.5	0.106	+			40282	STSQTFIYK	9	85	537.7770513588165	1073.539549784433	2	537.777587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STSQTFIYK_	ENSG00000004487|ENST00000400181|KDM1A;nc|ENSG00000004487|O60341|KDM1A	204.4243087208965	1.4601778531241419E-05	6				NaN	NaN	0	NaN	7272	3246	10517
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10521	28.894	NaN	4299	30	0	577.97	0.106	+			29780	PIIATSNGNLV	11	66	549.8114518283887	1097.6083507235774	2	549.8116455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PIIATSNGNLV_	ENSG00000197428|ENST00000641817|OR51D1	37.81151784470057	0.5878881669006212	6				NaN	NaN	0	NaN	7273	3246	10517
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10522	28.896	NaN	3074.2	30	0	307.84	0.106			+	25304	LPAMIVLFF	9	70	533.8055880468664	1065.5966231605328	2	533.8060913085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_LPAM(Oxidation (M))IVLFF_	REV__SLC12A3|p.V295Afs*7|1|0.05|ENSG00000070915|chr16:56872382-56872382|T/-|frameshift_variant	60.403631409065575	0.21025000616765316	6				NaN	NaN	0	NaN	7274	3246	10517
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10523	28.898	NaN	3390.5	30	0	1515.7	0.106			+	-1	LLHAAMRGRR	10	45	399.56480152710435	1195.6725751815131	3	399.56439208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_LLHAAM(Oxidation (M))RGRR_	REV__ENST00000406644.7_1_22:41792013-41792211:+|nuORF	29.170058357718403	0.6416167986984785	6				NaN	NaN	0	NaN	7275	3246	10517
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10524	28.899	NaN	2039.2	30	0	363.92	0.032				-1	 	0	50	381.70047777903045	761.3864026248609	2	381.70025634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7276	3246	10517
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10542	28.935	NaN	47016	30	0	12188	0.214	+			40314	STSSVIMMK	9	82	492.2485623303394	982.4825717274788	2	492.24835205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STSSVIMMK_	ENST00000521804.1_1_8:142264568-142318349:-|nuORF	200.15690381979954	3.265422741743988E-05	6				NaN	NaN	0	NaN	7291	3249	10541
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10543	28.938	NaN	41740	30	0	6035.2	0.106	+			36031	SEIQALTL	8	91	437.7478410374266	873.4811291416532	2	437.74755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEIQALTL_	ENSG00000003509|ENST00000002125|NDUFAF7;ENST00000474154.5_1_2:37458848-37468954:+|nuORF	125.81401957644128	0.2262431007506538	6				NaN	NaN	0	NaN	7292	3249	10541
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10544	28.94	NaN	18732	30	0	5620.1	0.106	+			38575	SSFREMLQK	9	69	375.862193581083	1124.564751343449	3	375.8620300292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSFREMLQK_	ENSG00000188643|ENST00000368706|S100A16;ENST00000474991.1_1_1:153580188-153585458:-|nuORF	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	7293	3249	10541
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10545	28.942	NaN	6967	30	0	1100.9	0.106	+			7181	DAGPPTHAF	9	60	456.71421241803773	911.4138719028755	2	456.71392822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DAGPPTHAF_	ENSG00000139946|ENST00000267460|PELI2;ENSG00000197329|ENST00000358912|PELI1	76.7741389293348	0.11149722112137898	6				NaN	NaN	0	NaN	7294	3249	10541
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10546	28.944	NaN	15006	30	0	4674.2	0.106	+			4960	ATQTQFFHVK	10	67	402.8806448705532	1205.6201052118597	3	402.8802490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATQTQFFHVK_	ENSG00000163564|ENST00000368140|PYHIN1;ENSG00000163565|ENST00000295809|IFI16;ENST00000485134.1_1_1:158911778-158914889:+|nuORF;ENST00000493884.5_1_1:158984458-159022017:+|nuORF;nc|ENSG00000163564|Q6K0P9-2|PYHIN1;nc|ENSG00000163564|Q6K0P9-3|PYHIN1;nc|ENSG00000163564|Q6K0P9-4|PYHIN1;nc|ENSG00000163565|Q16666-2|IFI16;nc|ENSG00000163565|Q16666-3|IFI16;nc|ENSG00000163565|Q16666-6|IFI16;nc|ENSG00000163565|Q16666-8|IFI16	81.52500206392136	0.18316182710238588	6				NaN	NaN	0	NaN	7295	3249	10541
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10547	28.946	NaN	3992.7	30	0	717.06	0.035			+	45969	VASWRLRC	8	59	495.7706815650433	989.5268101968866	2	495.7677917480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VASWRLRC_	REV__ENST00000593284.5_1_19:47996712-47998321:+|nuORF	60.97194046774394	0.49215940876911696	6				NaN	NaN	0	NaN	7296	3249	10541
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10548	28.946	NaN	7012.7	30	0	2223.9	0.144	+			31875	QPYDSRRVLY	10	51	432.8947433278122	1295.6624005836366	3	432.8944091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QPYDSRRVLY_	ENSG00000142197|ENST00000691173|DOP1B;nc|ENSG00000142197|Q9Y3R5-2|DOP1B	41.42661286455405	0.5359995577334734	6				NaN	NaN	0	NaN	7297	3249	10541
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10566	28.985	NaN	33717	30	0	9503.3	0.214	+			23717	LAVDKSASL	9	86	452.2607556001392	902.5069582670784	2	452.2607727050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LAVDKSASL_	ENSG00000065526|ENST00000375759|SPEN;SPEN|p.A2105Lfs*33|1|0.46|ENSG00000065526|chr1:15932548-15932548|G/-|frameshift_variant;SPEN|p.A2251Qfs*102|3|0.29|ENSG00000065526|chr1:15932985-15932985|C/-|frameshift_variant	138.06239232086	0.011389075116295402	6				NaN	NaN	0	NaN	7312	3252	10565
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10567	28.989	NaN	9898.1	30	0	2569.8	0.106	+			48812	VVAFPTDSK	9	76	482.2611885100695	962.507824086939	2	482.2607727050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVAFPTDSK_	ENSG00000149418|ENST00000278742|ST14	51.19269402634007	0.2889735674168909	6				NaN	NaN	0	NaN	7313	3252	10565
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10568	28.991	NaN	6913.5	30	0	823.12	0.106	+			19704	KDSLQKYL	8	70	497.7821177004443	993.5496824676886	2	497.78179931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KDSLQKYL_	ENSG00000111271|ENST00000313698|ACAD10;ENST00000413681.7_1_12:112130513-112186840:+|nuORF;ENST00000507135.5_1_12:112130513-112159479:+|nuORF;ENST00000514847.5_1_12:112150343-112159544:+|nuORF;nc|ENSG00000111271|Q6JQN1-2|ACAD10;nc|ENSG00000111271|Q6JQN1-4|ACAD10;nc|ENSG00000111271|Q6JQN1-5|ACAD10	64.20726635412375	0.4601301477144759	6				NaN	NaN	0	NaN	7314	3252	10565
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10569	28.993	NaN	8836.9	30	0	1003.9	0.106	+			10970	FEAQGKPEL	9	69	509.7638291579147	1017.5131053826294	2	509.76397705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FEAQGKPEL_	ENSG00000088356|ENST00000202017|PDRG1	112.2953585152457	0.026655838328212944	6				NaN	NaN	0	NaN	7315	3252	10565
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10570	28.994	NaN	21867	30	0	4089.6	0.106	+			3291	ASLQSIIHK	9	77	332.86610636133264	995.5764896841979	3	332.8660583496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASLQSIIHK_	ENSG00000095787|ENST00000354911|WAC;nc|ENSG00000095787|Q9BTA9-2|WAC;nc|ENSG00000095787|Q9BTA9-3|WAC;nc|ENSG00000095787|Q9BTA9-5|WAC	74.25504064058377	0.12238981753128622	6				NaN	NaN	0	NaN	7316	3252	10565
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10571	28.996	NaN	4068	30	0	1041.3	0.036	+			30788	QEAEMAQNAV	10	63	545.7453873753112	1089.4762218174224	2	545.7460327148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QEAEMAQNAV_	ENSG00000168036|ENST00000349496|CTNNB1	74.1650062923329	0.2432923583094885	6				NaN	NaN	0	NaN	7317	3252	10565
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10572	28.997	NaN	5318.3	30	0	741.74	0.141				-1	 	0	76	532.2948966843292	531.2876202177291	1	532.2960205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7318	3252	10565
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10590	29.036	NaN	11563	30	0	1284.6	0.214			+	47916	VSLSALATVA	10	84	466.2765292437778	930.5385055543557	2	466.2765197753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSLSALATVA_	REV__ENSG00000061273|ENST00000080059|HDAC7;REV__ENST00000380610.8_1_12:48177626-48179231:-|nuORF;REV__ENST00000459625.5_1_12:48177626-48178022:-|nuORF;REV__ENST00000549883.5_1_12:48177626-48179064:-|nuORF;REV__nc|ENSG00000061273|Q8WUI4-10|HDAC7;REV__nc|ENSG00000061273|Q8WUI4-2|HDAC7;REV__nc|ENSG00000061273|Q8WUI4-3|HDAC7;REV__nc|ENSG00000061273|Q8WUI4-4|HDAC7;REV__nc|ENSG00000061273|Q8WUI4-6|HDAC7;REV__nc|ENSG00000061273|Q8WUI4-7|HDAC7;REV__nc|ENSG00000061273|Q8WUI4-9|HDAC7;REV__nc|ENSG00000061273|Q8WUI4|HDAC7	66.42927471994793	0.3073667423445326	6				NaN	NaN	0	NaN	7333	3255	10589
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10591	29.04	NaN	9582.7	30	0	2863.8	0.106	+			23498	LAGHGHRL	8	62	430.74556082044745	859.4765687076949	2	430.7455139160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LAGHGHRL_	ENST00000429681.1_1_3:49017674-49021180:-|nuORF	54.76467175910256	0.5536104764165384	6				NaN	NaN	0	NaN	7334	3255	10589
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10592	29.042	NaN	4526.7	30	0	2539.4	0.106	+			18858	IVFADPVKK	9	44	339.54278509019287	1015.6065258707786	3	339.54278564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IVFADPVKK_	ENSG00000179630|ENST00000325686|LACC1	24.20275056022122	0.577060078256802	6				NaN	NaN	0	NaN	7335	3255	10589
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10593	29.044	NaN	7122.1	30	0	900.98	0.106				-1	SAAILEAMDL	10	75	525.2632304392018	1048.5119079452036	2	525.2639770507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_SAAILEAM(Oxidation (M))DL_	ENSG00000151948|ENST00000442111|GLT1D1;nc|ENSG00000151948|Q96MS3-2|GLT1D1	49.44154591367651	0.46214596422418036	6				NaN	NaN	0	NaN	7336	3255	10589
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10594	29.045	NaN	3653.5	30	0	506.1	0.106	+			26633	LVCALGLSVGL	11	66	522.811380931774	1043.608208930348	2	522.8125610351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LVCALGLSVGL_	ENSG00000237541|ENST00000374940|HLA-DQA2	35.61828744233558	0.616184410043185	6				NaN	NaN	0	NaN	7337	3255	10589
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10595	29.047	NaN	5780.4	30	0	649.73	0.034			+	17353	IAKKAEEY	8	70	476.2608016382897	950.5070503433794	2	476.2607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IAKKAEEY_	REV__ENSG00000139746|ENST00000438737|RBM26;REV__nc|ENSG00000139746|Q5T8P6-2|RBM26;REV__nc|ENSG00000139746|Q5T8P6-3|RBM26;REV__nc|ENSG00000139746|Q5T8P6-4|RBM26;REV__nc|ENSG00000139746|Q5T8P6-5|RBM26;REV__RBM26|p.N783Ifs*5|1|0.11|ENSG00000139746|chr13:79342743-79342743|T/-|frameshift_variant	60.97194046774394	0.49215940876911696	6				NaN	NaN	0	NaN	7338	3255	10589
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10596	29.048	NaN	7716.6	30	0	2894.9	0.143	+			26861	LVYKYIVQK	9	60	385.2371248226519	1152.6895450681557	3	385.2373352050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LVYKYIVQK_	DYNC1LI1|p.I430Nfs*2|1|0.3|ENSG00000144635|chr3:32529557-32529558|-/T|frameshift_variant;ENSG00000144635|ENST00000273130|DYNC1LI1;ENST00000481915.5_1_3:32574447-32611850:-|nuORF	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	7339	3255	10589
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10614	29.086	NaN	14280	30	0	2298.2	0.214	+			45821	VAIKAGTTL	9	80	437.27401008045416	872.5334672277083	2	437.2735900878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VAIKAGTTL_	ENSG00000166471|ENST00000528080|TMEM41B;ENST00000524543.5_1_11:9304973-9316821:-|nuORF;ENST00000533867.1_1_11:9304973-9309374:-|nuORF	95.81516180277367	0.04847050768394289	6				NaN	NaN	0	NaN	7354	3258	10613
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10615	29.09	NaN	23783	30	0	3665.5	0.106	+			41379	SVMGVTVSR	9	75	468.2523883980247	934.4902238628495	2	468.252197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVMGVTVSR_	DIP2B|p.A1021Cfs*11|1|0.32|ENSG00000066084|chr12:50721279-50721280|-/CTGTATGCAC|frameshift_variant;DIP2B|p.I979Afs*17|1|0.13|ENSG00000066084|chr12:50718790-50718815|AAATAGAAGAGAATGATTTGGTGAGG/-|frameshift_variant;DIP2B|p.V1240Dfs*9|1|0.05|ENSG00000066084|chr12:50731445-50731446|-/ATATTTAC|frameshift_variant;DIP2B|p.V893Gfs*91|1|0.06|ENSG00000066084|chr12:50714417-50714418|-/G|frameshift_variant;ENSG00000066084|ENST00000301180|DIP2B	126.24258497203832	0.01742065577488747	6				NaN	NaN	0	NaN	7355	3258	10613
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10616	29.092	NaN	11917	30	0	928.1	0.106			+	22418	KTKLGKFTQ	9	83	525.8186190871701	1049.62268524114	2	525.8185424804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KTKLGKFTQ_	REV__ENSG00000275052|ENST00000616407|PPP4R3B;REV__nc|ENSG00000275052|Q5MIZ7-2|PPP4R3B;REV__nc|ENSG00000275052|Q5MIZ7-3|PPP4R3B;REV__nc|ENSG00000275052|Q5MIZ7-5|PPP4R3B	79.48907831485694	0.09975780661107167	6				NaN	NaN	0	NaN	7356	3258	10613
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10617	29.094	NaN	13170	30	0	1582.3	0.106	+			17764	IESADLTSL	9	74	474.7471637961902	947.4797746591804	2	474.7481994628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IESADLTSL_	ENSG00000137473|ENST00000325106|TTC29;nc|ENSG00000137473|Q8NA56-2|TTC29	87.75429964447693	0.0711966946989736	6				NaN	NaN	0	NaN	7357	3258	10613
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10618	29.095	NaN	20810	30	0	5091.4	0.106			+	7692	DLLETHVA	8	83	449.2383478736112	896.4621428140224	2	449.2374572753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DLLETHVA_	REV__ENST00000513466.5_1_3:129823014-129828039:-|nuORF	62.97842346883844	0.4722955155785405	6				NaN	NaN	0	NaN	7358	3258	10613
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10619	29.097	NaN	2457.1	30	0	1639.2	0.106				-1	 	0	33	343.21714770705523	684.4197424809105	2	343.21697998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7359	3258	10613
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10620	29.099	NaN	4035.4	30	0	505.33	0.035	+			49253	VVNSQTLLH	9	68	505.78501200060106	1009.5554710680021	2	505.78460693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VVNSQTLLH_	ARID2|p.N1778Ifs*13|1|0.15|ENSG00000189079|chr12:45893686-45893686|A/-|frameshift_variant;ARID2|p.P851Hfs*4|1|0.36|ENSG00000189079|chr12:45850671-45850671|C/-|frameshift_variant;ENSG00000189079|ENST00000334344|ARID2;nc|ENSG00000189079|Q68CP9-3|ARID2	49.536043120802724	0.308405419312776	6				NaN	NaN	0	NaN	7360	3258	10613
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10638	29.136	NaN	50747	30	0	21449	0.214			+	2958	ASEQSALPL	9	91	458.2426939566985	914.470834980197	2	458.2425231933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASEQSALPL_	REV__ENSG00000130640|ENST00000252936|TUBGCP2;REV__nc|ENSG00000130640|Q9BSJ2-3|TUBGCP2;REV__nc|ENSG00000130640|Q9BSJ2-4|TUBGCP2;REV__TUBGCP2|p.H261Qfs*13|1|0.5|ENSG00000130640|chr10:133293603-133293603|G/-|frameshift_variant	120.62098272573253	0.020823834273767324	6				NaN	NaN	0	NaN	7375	3261	10637
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10639	29.139	NaN	44146	30	0	13169	0.106	+			36388	SETKIFTA	8	102	448.7395795986629	NaN	0	448.7395935058594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SETKIFTA_	ENSG00000143569|ENST00000428931|UBAP2L;nc|ENSG00000143569|Q14157-1|UBAP2L;nc|ENSG00000143569|Q14157-3|UBAP2L;nc|ENSG00000143569|Q14157-4|UBAP2L;nc|ENSG00000143569|Q14157-5|UBAP2L	77.31757898189308	1.7418937515398478	6				NaN	NaN	0	NaN	7376	3261	10637
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10640	29.142	NaN	12425	30	0	3508.9	0.106	+			30910	QEKVSDYEM	9	70	564.7478117252333	NaN	0	564.7477416992188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QEKVSDYEM_	ENSG00000132646|ENST00000379143|PCNA	146.78539889680295	0.0014292327921901949	6				NaN	NaN	0	NaN	7377	3261	10637
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10641	29.143	NaN	20808	30	0	5502.8	0.106	+			44822	TTSNFTFSK	9	82	516.7530859958521	1031.491619058504	2	516.7534790039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TTSNFTFSK_	ENSG00000160294|ENST00000291688|MCM3AP;MCM3AP|p.K492Efs*5|1|0.29|ENSG00000160294|chr21:46280545-46280546|-/C|frameshift_variant	157.3448221729694	0.005157168637584854	6				NaN	NaN	0	NaN	7378	3261	10637
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10642	29.145	NaN	5926	30	0	655.43	0.106	+			25841	LSEEETKL	8	71	474.7471637961902	947.4797746591804	2	474.7484130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSEEETKL_	ENSG00000171804|ENST00000447313|WDR87;nc|ENSG00000171804|Q6ZQQ6-2|WDR87;nc|ENSG00000171804|Q6ZQQ6|WDR87;WDR87|p.A2794Pfs*4|1|0.26|ENSG00000171804|chr19:37885175-37885175|T/-|frameshift_variant;WDR87|p.K2720Rfs*57|5|0.35|ENSG00000171804|chr19:37885395-37885395|T/-|frameshift_variant;WDR87|p.Q1927Tfs*32|1|0.44|ENSG00000171804|chr19:37887775-37887776|-/T|frameshift_variant;WDR87|p.R2063Gfs*11|1|0.12|ENSG00000171804|chr19:37887367-37887367|T/-|frameshift_variant;WDR87|p.R2063Kfs*25|1|0.32|ENSG00000171804|chr19:37887366-37887367|-/T|frameshift_variant	66.42927471994793	0.4381325844043345	6				NaN	NaN	0	NaN	7379	3261	10637
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10643	29.147	NaN	7992.4	30	0	1838.1	0.036	+			29234	NVYEVVNPK	9	68	531.2851099904873	1060.5556670477745	2	531.2853393554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NVYEVVNPK_	ENSG00000139117|ENST00000331366|CPNE8	114.8945686534367	0.024290463251177924	6				NaN	NaN	0	NaN	7380	3261	10637
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10644	29.148	NaN	5466.8	30	0	499.08	0.141			+	19553	KCKRYLQE	8	76	534.2867467003213	1066.5589404674424	2	534.2871704101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KCKRYLQE_	REV__ENSG00000187535|ENST00000426508|IFT140;REV__ENST00000565298.5_1_16:1574507-1576156:-|nuORF;REV__nc|ENSG00000187535|Q96RY7-2|IFT140	53.351449002276354	0.5676011784961348	6				NaN	NaN	0	NaN	7381	3261	10637
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10662	29.183	NaN	3742.7	30	0	863.66	0.214			+	29476	PCRKGRRSF	9	59	369.5380767700263	1105.592400910279	3	369.5379333496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PCRKGRRSF_	REV__ENST00000378536.4_1_1:2240387-2240723:+|nuORF	34.172542307311794	0.4838870758800184	6				NaN	NaN	0	NaN	7396	3264	10661
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10663	29.187	NaN	8765.8	30	0	855.21	0.106	+			19327	KAIFTVDAK	9	72	496.79345077767226	991.5723486221445	2	496.79742431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KAIFTVDAK_	ENSG00000115687|ENST00000234040|PASK;nc|ENSG00000115687|Q96RG2-2|PASK;nc|ENSG00000115687|Q96RG2-4|PASK;PASK|p.G604Afs*4|1|0.43|ENSG00000115687|chr2:241127104-241127104|C/-|frameshift_variant;PASK|p.H679Pfs*57|1|0.41|ENSG00000115687|chr2:241126879-241126880|-/G|frameshift_variant	79.71258880314673	0.09879134589249085	6				NaN	NaN	0	NaN	7397	3264	10661
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10664	29.189	NaN	3559.3	30	0	576.5	0.106	+			26641	LVDESVSVT	9	70	474.7471637961902	947.4797746591804	2	475.245361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LVDESVSVT_	ENSG00000055609|ENST00000262189|KMT2C;KMT2C|p.F4496Lfs*21|3|0.28|ENSG00000055609|chr7:152148439-152148439|A/-|frameshift_variant;KMT2C|p.I4868Lfs*37|1|0.28|ENSG00000055609|chr7:152138837-152138837|T/-|frameshift_variant;KMT2C|p.K2867Dfs*7|1|0.28|ENSG00000055609|chr7:152176853-152176854|TT/-|frameshift_variant;KMT2C|p.P2292Hfs*13|1|0.25|ENSG00000055609|chr7:152180985-152180985|G/-|frameshift_variant;KMT2C|p.S2816Ifs*6|1|0.44|ENSG00000055609|chr7:152177007-152177008|-/T|frameshift_variant;KMT2C|p.T3715Qfs*4|1|0.34|ENSG00000055609|chr7:152162434-152162434|T/-|frameshift_variant;nc|ENSG00000055609|Q8NEZ4-2|KMT2C;nc|ENSG00000055609|Q8NEZ4-3|KMT2C	55.50420428727701	0.2510918378945873	6				NaN	NaN	0	NaN	7398	3264	10661
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10665	29.191	NaN	2640	30	0	238.27	0.106	+			36359	SESVASSQL	9	55	454.22191970565234	906.4292864781047	2	454.22174072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SESVASSQL_	ENSG00000086666|ENST00000261749|ZFAND6;ENST00000561017.1_1_15:80414070-80415156:+|nuORF;nc|ENSG00000086666|Q6FIF0-2|ZFAND6	51.19269402634007	0.2889735674168909	6				NaN	NaN	0	NaN	7399	3264	10661
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10666	29.192	NaN	5655.1	30	0	1625.4	0.106	+			749	AEDPSKSYVKL	11	55	412.88721054648005	1235.6398022396402	3	412.8869323730469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEDPSKSYVKL_	ENSG00000128708|ENST00000264108|HAT1;ENST00000457761.6_1_2:172821936-172844354:+|nuORF;nc|ENSG00000128708|O14929-2|HAT1	33.03940026070387	0.6432348334061824	6				NaN	NaN	0	NaN	7400	3264	10661
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10667	29.194	NaN	1585.3	30	0	179.89	0.035	+			2431	APFGEKEAY	9	59	506.2425644678923	1010.4705760025846	2	506.242431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_APFGEKEAY_	ENSG00000105122|ENST00000343625|RASAL3;nc|ENSG00000105122|Q86YV0-2|RASAL3	34.172542307311794	0.4838870758800184	6				NaN	NaN	0	NaN	7401	3264	10661
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10668	29.195	NaN	4355.2	30	0	507.58	0.139	+			47630	VSAPNIAMK	9	70	465.7573987923888	929.5002446515776	2	465.75714111328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VSAPNIAMK_	ENSG00000126883|ENST00000359428|NUP214;nc|ENSG00000126883|P35658-2|NUP214;nc|ENSG00000126883|P35658-3|NUP214;nc|ENSG00000126883|P35658-4|NUP214;nc|ENSG00000126883|P35658-5|NUP214;NUP214|p.P1285Rfs*3|1|0.28|ENSG00000126883|chr9:131197346-131197359|CCCAGGAGAACCTG/-|frameshift_variant	49.44154591367651	0.3095138337212152	6				NaN	NaN	0	NaN	7402	3264	10661
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10686	29.234	NaN	10972	30	0	1370.5	0.214	+			4099	ATDPNILGR	9	79	478.7616586165136	955.5087642998272	2	478.76116943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATDPNILGR_	ENSG00000253729|ENST00000314191|PRKDC;ENST00000536483.1_1_8:48686736-48691238:-|nuORF;nc|ENSG00000253729|P78527-2|PRKDC	78.26377905018397	0.10505600812668463	6				NaN	NaN	0	NaN	7417	3267	10685
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10687	29.238	NaN	15361	30	0	1503.4	0.106	+			20440	KEVAELTRL	9	74	529.8140142039841	1057.6134754747682	2	529.8141479492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEVAELTRL_	ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1	145.46060221211434	0.007927189773590037	6				NaN	NaN	0	NaN	7418	3267	10685
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10688	29.24	NaN	5758.9	30	0	1403.8	0.106	+			17612	IEGVTHAL	8	60	420.23454806404067	838.4545431948814	2	420.2344055175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IEGVTHAL_	ENSG00000136628|ENST00000366923|EPRS1	65.80317337860623	0.44433089765398776	6				NaN	NaN	0	NaN	7419	3267	10685
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10689	29.241	NaN	5156.8	30	0	617.9	0.106	+			40894	SVFLVMEY	8	72	494.248265347062	NaN	0	494.24774169921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVFLVMEY_	ENSG00000083290|ENST00000395544|ULK2;ULK2|p.A514Sfs*12|1|0.06|ENSG00000083290|chr17:19797665-19797666|-/T|frameshift_variant;ULK2|p.F266Lfs*11|1|0.36|ENSG00000083290|chr17:19826176-19826176|A/-|frameshift_variant	52.29916861842294	1.7418937515398478	6				NaN	NaN	0	NaN	7420	3267	10685
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10690	29.243	NaN	2374.5	30	0	302.3	0.106			+	44502	TSSPTPPPPPP	11	66	537.7770513588165	1073.539549784433	2	537.7774047851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TSSPTPPPPPP_	REV__ENSG00000100312|ENST00000216139|ACR	42.396135135203025	0.5251566046092361	6				NaN	NaN	0	NaN	7421	3267	10685
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10691	29.245	NaN	4323	30	0	1032.7	0.033			+	26212	LSSGALDIK	9	65	452.2607556001392	902.5069582670784	2	452.2553405761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSSGALDIK_	REV__ENSG00000147010|ENST00000397821|SH3KBP1;REV__nc|ENSG00000147010|Q96B97-2|SH3KBP1;REV__nc|ENSG00000147010|Q96B97-3|SH3KBP1;REV__SH3KBP1|p.L574Cfs*39|3|0.28|ENSG00000147010|chrX:19542097-19542097|G/-|frameshift_variant	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	7422	3267	10685
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10692	29.246	NaN	1266.3	30	0	208.48	0.142	+			20308	KEQDIYTHL	9	52	573.7927856445312	NaN	0	573.7927856445312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KEQDIYTHL_	CDK5RAP2|p.L1409*|1|0.2|ENSG00000136861|chr9:120415111-120415111|A/-|frameshift_variant;CDK5RAP2|p.N746Kfs*10|1|0.2|ENSG00000136861|chr9:120458587-120458588|-/T|frameshift_variant;CDK5RAP2|p.P1012Lfs*62|1|0.27|ENSG00000136861|chr9:120443733-120443733|G/-|frameshift_variant;ENSG00000136861|ENST00000349780|CDK5RAP2;ENST00000483412.5_1_9:123170580-123298708:-|nuORF;nc|ENSG00000136861|Q96SN8-2|CDK5RAP2;nc|ENSG00000136861|Q96SN8-3|CDK5RAP2;nc|ENSG00000136861|Q96SN8-4|CDK5RAP2	40.77816245573522	0.2702456086868081	6				NaN	NaN	0	NaN	7423	3267	10685
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10710	29.284	NaN	37789	30	0	11360	0.214	+			39898	STLSTVISK	9	81	468.27408203238093	934.5336111315619	2	468.2740478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STLSTVISK_	ENSG00000174197|ENST00000703841|MGA;MGA|p.D2578Rfs*45|1|0.32|ENSG00000174197|chr15:41762342-41762343|-/A|frameshift_variant;MGA|p.S2228Kfs*5|1|0.33|ENSG00000174197|chr15:41750284-41750285|-/A|frameshift_variant;MGA|p.T1916Qfs*7|1|0.4|ENSG00000174197|chr15:41749350-41749350|A/-|frameshift_variant	131.61620852596164	0.014413238321579053	6				NaN	NaN	0	NaN	7438	3270	10709
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10711	29.288	NaN	15555	30	0	1957.3	0.106	+			36185	SELITKAV	8	69	430.75809999576694	859.5016470583339	2	430.75799560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SELITKAV_	ENSG00000124575|ENST00000244534|H1-3;ENSG00000168298|ENST00000304218|H1-4;ENSG00000184357|ENST00000331442|H1-5;ENSG00000187837|ENST00000343677|H1-2	69.6276240434122	0.4100012001731381	6				NaN	NaN	0	NaN	7439	3270	10709
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10712	29.29	NaN	15462	30	0	4602.1	0.106	+			3311	ASLTAALAK	9	73	423.2582277058114	844.5019024784228	2	423.2581481933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASLTAALAK_	ENSG00000197892|ENST00000524189|KIF13B;nc|ENSG00000197892|Q9NQT8-2|KIF13B	109.47833844074708	0.029530294723441826	6				NaN	NaN	0	NaN	7440	3270	10709
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10713	29.291	NaN	9077.5	30	0	3652.7	0.106			+	28516	NIDDVQFVF	9	69	548.768204657474	1095.521856381748	2	549.26904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NIDDVQFVF_	REV__ENST00000541180.1_1_16:71958590-71961713:+|nuORF	55.50420428727701	0.2510918378945873	6				NaN	NaN	0	NaN	7441	3270	10709
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10714	29.293	NaN	4168.5	30	0	393.48	0.106	+			23458	LAEEKAAVL	9	60	472.276743504941	942.538934076682	2	472.2765197753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LAEEKAAVL_	ENSG00000105357|ENST00000642316|MYH14;MYH14|p.L1950Sfs*14|1|0.34|ENSG00000105357|chr19:50309646-50309646|C/-|frameshift_variant;nc|ENSG00000105357|Q7Z406-6|MYH14;nc|ENSG00000105357|Q7Z406|MYH14	93.1432384553994	0.056003526918089595	6				NaN	NaN	0	NaN	7442	3270	10709
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10715	29.295	NaN	3803.1	30	0	798.68	0.035	+			29450	PCLPEEASVG	10	62	501.2342255066827	1000.4538980801655	2	501.2344055175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PCLPEEASVG_	ENST00000550487.5_1_12:50506019-50513852:+|nuORF	30.503639358989545	0.6307262373768582	6				NaN	NaN	0	NaN	7443	3270	10709
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10716	29.296	NaN	4117.1	30	0	1329.2	0.144				-1	CFVTFYTRKA	10	54	646.8271443636812	1291.6397357941623	2	646.8276977539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_C(Carbamidomethyl (C))FVTFYTRKA_	CELF2|p.A423Gfs*31|1|0.4|ENSG00000048740|chr10:11325842-11325843|-/G|frameshift_variant;ENSG00000048740|ENST00000633077|CELF2;ENSG00000149187|ENST00000687097|CELF1;nc|ENSG00000048740|O95319-2|CELF2;nc|ENSG00000048740|O95319-3|CELF2;nc|ENSG00000048740|O95319-4|CELF2;nc|ENSG00000048740|O95319-5|CELF2;nc|ENSG00000048740|O95319|CELF2;nc|ENSG00000149187|Q92879-2|CELF1;nc|ENSG00000149187|Q92879-3|CELF1;nc|ENSG00000149187|Q92879-4|CELF1;nc|ENSG00000149187|Q92879-5|CELF1;nc|ENSG00000149187|Q92879-6|CELF1;nc|ENSG00000149187|Q92879|CELF1	24.519189625965996	0.6795976720565101	6				NaN	NaN	0	NaN	7444	3270	10709
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10734	29.334	NaN	8956.8	30	0	2207.8	0.214	+			48129	VSVPELKPE	9	64	499.28218332916015	996.5498137251203	2	499.2815856933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSVPELKPE_	AHDC1|p.F1046Sfs*96|1|0.2|ENSG00000126705|chr1:27548981-27548981|G/-|frameshift_variant;AHDC1|p.K586Nfs*37|6|0.23|ENSG00000126705|chr1:27550358-27550358|T/-|frameshift_variant;AHDC1|p.K985Sfs*157|1|0.06|ENSG00000126705|chr1:27549162-27549162|T/-|frameshift_variant;ENSG00000126705|ENST00000673934|AHDC1	58.22992032128504	0.22837015374068087	6				NaN	NaN	0	NaN	7459	3273	10733
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10735	29.338	NaN	6070	30	0	1065	0.106	+			7182	DAGPPTHAF	9	72	456.71421241803773	911.4138719028755	2	456.7138977050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DAGPPTHAF_	ENSG00000139946|ENST00000267460|PELI2;ENSG00000197329|ENST00000358912|PELI1	60.97194046774394	0.20551255781574032	6				NaN	NaN	0	NaN	7460	3273	10733
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10736	29.34	NaN	7540.6	30	0	2995.9	0.106	+			49900	VYTTMAEHF	9	63	557.7472096850562	1113.4798664369123	2	557.7476196289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_VYTTM(Oxidation (M))AEHF_	ENSG00000117472|ENST00000372003|TSPAN1;TSPAN1|p.T119M|1|0.33|ENSG00000117472|chr1:46184801-46184801|C/T|missense_variant	120.62098272573253	0.020823834273767324	6				NaN	NaN	0	NaN	7461	3273	10733
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10737	29.342	NaN	4478.1	30	0	685.55	0.106			+	31987	QRELQAAY	8	66	489.75400467431746	977.4934564154349	2	489.7535095214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QRELQAAY_	REV__ENSG00000132024|ENST00000318003|CC2D1A;REV__nc|ENSG00000132024|Q6P1N0-2|CC2D1A	54.776311868738084	0.5534952410049249	6				NaN	NaN	0	NaN	7462	3273	10733
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10738	29.343	NaN	2712.5	30	0	394.9	0.106			+	7933	DSIHATLEF	9	67	516.7530859958521	1031.491619058504	2	517.2523193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DSIHATLEF_	REV__ENSG00000240184|ENST00000308177|PCDHGC3;REV__nc|ENSG00000240184|Q9UN70-2|PCDHGC3;REV__PCDHGC3|p.F556Lfs*34|1|0.18|ENSG00000240184|chr5:141477782-141477782|T/-|frameshift_variant;REV__PCDHGC3|p.N689Ifs*10|6|0.29|ENSG00000240184|chr5:141478175-141478175|A/-|frameshift_variant	38.80614096846853	0.43426287593479557	6				NaN	NaN	0	NaN	7463	3273	10733
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10739	29.345	NaN	2583.8	30	0	499.33	0.035			+	24866	LKERNCVY	8	64	512.7642347949378	1023.5139166566756	2	512.7643432617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LKERNCVY_	REV__ENSG00000197006|ENST00000358154|METTL9;REV__nc|ENSG00000197006|Q9H1A3-2|METTL9	28.2542754592877	0.7411748056684583	6				NaN	NaN	0	NaN	7464	3273	10733
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10740	29.346	NaN	5043.1	30	0	1457	0.14				-1	ATCELPLAK	9	57	501.76824635536474	NaN	0	501.76806640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_ATC(Carbamidomethyl (C))ELPLAK_	ENSG00000148450|ENST00000376510|MSRB2	64.20726635412375	0.13137488984569443	6				NaN	NaN	0	NaN	7465	3273	10733
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10758	29.385	NaN	8549.1	30	0	2164.2	0.214	+			15447	GTYVGLTCK	9	52	471.2415904924674	940.4686280517349	2	471.241455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTYVGLTCK_	ENSG00000221926|ENST00000649191|TRIM16;nc|ENSG00000221926|O95361-2|TRIM16;nc|ENSG00000291110|Q309B1|TRIM16L	80.45461616416974	0.09558281504443908	6				NaN	NaN	0	NaN	7480	3276	10757
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10759	29.388	NaN	10809	30	0	2234	0.106	+			5977	AVLPTPVTK	9	65	463.28958404948315	924.5646151657663	2	463.2892150878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVLPTPVTK_	ENSG00000197724|ENST00000359246|PHF2;PHF2|p.S954Efs*9|1|0.47|ENSG00000197724|chr9:93676611-93676612|-/A|frameshift_variant	42.86426827375447	0.38666266728046506	6				NaN	NaN	0	NaN	7481	3276	10757
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10760	29.391	NaN	7668.8	30	0	880.74	0.106	+			29607	PFSVVGSNQL	10	70	524.2790301483186	NaN	0	524.2794189453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PFSVVGSNQL_	ENSG00000168385|ENST00000391971|SEPTIN2;ENST00000481500.1_1_2:242277175-242285749:+|nuORF;nc|ENSG00000168385|Q15019-2|SEPTIN2;nc|ENSG00000168385|Q15019-3|SEPTIN2	64.20726635412375	0.1999210135493042	6				NaN	NaN	0	NaN	7482	3276	10757
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10761	29.392	NaN	5995.4	30	0	1179.5	0.106	+			47759	VSGPTLLAK	9	70	443.2739173614661	884.5332817897322	2	443.27337646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSGPTLLAK_	ENSG00000126790|ENST00000247194|L3HYPDH;ENST00000527981.1_1_14:59950407-59951094:-|nuORF	69.6276240434122	0.14239879520340665	6				NaN	NaN	0	NaN	7483	3276	10757
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10762	29.394	NaN	23525	30	0	6093.5	0.106	+			40674	SVASISLTK	9	71	453.26870482695654	904.5228567207131	2	453.7558288574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVASISLTK_	ENST00000298289.6_1_14:50085755-50087389:-|nuORF	109.47833844074708	0.029530294723441826	6				NaN	NaN	0	NaN	7484	3276	10757
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10763	29.396	NaN	4202.6	30	0	867.38	0.033	+			2592	AQGAVFLGK	9	60	445.75891510652303	889.5032772798461	2	445.7581481933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AQGAVFLGK_	ENSG00000073803|ENST00000265026|MAP3K13;ENST00000433092.5_1_3:185155245-185169222:+|nuORF;ENST00000477582.1_1_3:185155245-185161425:+|nuORF;MAP3K13|p.P645Lfs*19|1|0.35|ENSG00000073803|chr3:185473261-185473261|C/-|frameshift_variant;MAP3K13|p.V334Lfs*14|1|0.29|ENSG00000073803|chr3:185447932-185447932|A/-|frameshift_variant;nc|ENSG00000073803|O43283-4|MAP3K13	87.75429964447693	0.0711966946989736	6				NaN	NaN	0	NaN	7485	3276	10757
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10764	29.397	NaN	2231.7	30	0	303.03	0.139			+	32803	RATPQPSIS	9	63	478.7616586165136	955.5087642998272	2	479.76861572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RATPQPSIS_	REV__ENST00000321276.7_1_2:223289259-223339308:+|nuORF	37.15910966729921	0.4535818937225704	6				NaN	NaN	0	NaN	7486	3276	10757
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10782	29.435	NaN	395150	30	0	136600	0.159	+			40675	SVASISLTK	9	85	453.26870482695654	904.5228567207131	2	453.26849365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVASISLTK_	ENST00000298289.6_1_14:50085755-50087389:-|nuORF	172.24860141594272	0.002383092361811508	6				NaN	NaN	0	NaN	7501	3279	10781
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10783	29.437	NaN	13399	30	0	2272.4	0.106	+			46281	VEIAAKNL	8	66	429.258257041481	856.501961149762	2	429.258056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VEIAAKNL_	ENSG00000161533|ENST00000293217|ACOX1;nc|ENSG00000161533|Q15067-3|ACOX1;nc|ENSG00000161533|Q15067|ACOX1	101.60071028292904	0.24979566554663588	6				NaN	NaN	0	NaN	7502	3279	10781
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10784	29.439	NaN	10326	30	0	4125.2	0.106			+	30175	PSGKLSAPGP	10	76	455.7533540585637	909.4921551839274	2	455.7535095214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PSGKLSAPGP_	REV__ENST00000259523.10_1_8:128748556-128750522:+|nuORF;REV__ENST00000524013.1_1_8:128748556-128750522:+|nuORF	58.2462437865262	0.38179041844353556	6				NaN	NaN	0	NaN	7503	3279	10781
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10785	29.441	NaN	4347.5	30	0	357.92	0.106	+			19071	IYHPNVDKL	9	78	549.8008977139599	1097.5872424947197	2	549.8013916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IYHPNVDKL_	ENSG00000177889|ENST00000318066|UBE2N;nc|ENSG00000276380|Q5JXB2|UBE2NL	71.87747018426188	0.13267044672804276	6				NaN	NaN	0	NaN	7504	3279	10781
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10786	29.443	NaN	5461.6	30	0	2356.1	0.106			+	24601	LGQPNPFREG	10	64	372.19286412469955	NaN	0	372.19268798828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LGQPNPFREG_	REV__BCL9|p.P1111Lfs*3|1|0.39|ENSG00000116128|chr1:147624005-147624005|G/-|frameshift_variant;REV__BCL9|p.P971Hfs*11|2|0.26|ENSG00000116128|chr1:147622275-147622275|C/-|frameshift_variant;REV__BCL9|p.Q1139Rfs*138|1|0.37|ENSG00000116128|chr1:147624089-147624089|C/-|frameshift_variant;REV__BCL9|p.Q1162Rfs*115|2|0.28|ENSG00000116128|chr1:147624156-147624156|G/-|frameshift_variant;REV__BCL9|p.V910Cfs*42|2|0.23|ENSG00000116128|chr1:147620874-147620875|-/C|frameshift_variant;REV__ENSG00000116128|ENST00000234739|BCL9	45.02220120713402	0.3370728479115332	6				NaN	NaN	0	NaN	7505	3279	10781
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10787	29.445	NaN	1878.2	30	0	204.75	0.106			+	-1	ENRSGCLSDV	10	60	568.755615234375	NaN	0	568.755615234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_ENRSGC(Carbamidomethyl (C))LSDV_	REV__ENSG00000132612|ENST00000254950|VPS4A;REV__ENST00000562754.1_1_16:69353414-69354673:+|nuORF	35.15202426646627	0.38475398474706135	6				NaN	NaN	0	NaN	7506	3279	10781
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10788	29.447	NaN	4476.4	30	0	1190.3	0.034	+			7512	DGMPGTPGLK	10	67	486.74262250457673	NaN	0	486.7430725097656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DGMPGTPGLK_	COL4A2|p.P1057Lfs*10|1|0.18|ENSG00000134871|chr13:110485794-110485794|C/-|frameshift_variant;ENSG00000134871|ENST00000360467|COL4A2	44.377184641726394	0.34115073642966565	6				NaN	NaN	0	NaN	7507	3279	10781
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10807	29.483	NaN	23936	30	0	7123.3	0.214	+			19362	KALDFIASK	9	78	496.79345077767226	991.5723486221445	2	496.7924499511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KALDFIASK_	ACTN1|p.N119Efs*3|1|0.38|ENSG00000072110|chr14:68912228-68912229|-/TC|frameshift_variant;ENSG00000072110|ENST00000394419|ACTN1;ENSG00000130402|ENST00000252699|ACTN4;ENSG00000248746|ENST00000513398|ACTN3;ENST00000502692.5_1_11:66313918-66328094:+|nuORF;ENST00000513398.1_1_11:66314411-66328094:+|nuORF;ENST00000588618.5_1_19:39138385-39212431:+|nuORF;nc|ENSG00000072110|P12814-2|ACTN1;nc|ENSG00000072110|P12814-4|ACTN1;nc|ENSG00000072110|P12814|ACTN1	150.81021883065287	0.006680279908938716	6				NaN	NaN	0	NaN	7523	3282	10806
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10808	29.486	NaN	11841	30	0	5446.8	0.106			+	50033	WDVAGSNSL	9	63	474.7247107714426	947.4348686096852	2	474.7239685058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WDVAGSNSL_	REV__ENSG00000103994|ENST00000564754|ZNF106;REV__nc|ENSG00000103994|Q9H2Y7|ZNF106;REV__ZNF106|p.S482Pfs*33|1|0.22|ENSG00000103994|chr15:42450759-42450759|A/-|frameshift_variant	79.71258880314673	0.09879134589249085	6				NaN	NaN	0	NaN	7524	3282	10806
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10809	29.488	NaN	7034.7	30	0	921.01	0.034	+			10992	FEGKDMAAV	9	75	484.2314964700532	966.4484400069064	2	484.23162841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FEGKDMAAV_	ENSG00000149591|ENST00000392951|TAGLN;ENST00000533863.1_2_11:117074025-117074655:+|nuORF	51.52775601994872	0.28504342437107444	6				NaN	NaN	0	NaN	7525	3282	10806
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10827	29.526	NaN	8041.5	30	0	653.72	0.215	+			37953	SPFATTTKY	9	66	508.2593555451088	1014.5041581570176	2	508.2585144042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SPFATTTKY_	ENSG00000130147|ENST00000392011|SH3BP4	93.1432384553994	0.056003526918089595	6				NaN	NaN	0	NaN	7540	3285	10826
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10828	29.529	NaN	4433.4	30	0	1051.9	0.106	+			15991	HALVDSTAY	9	59	488.74042766103787	975.4663023888758	2	488.7401428222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HALVDSTAY_	ENSG00000117983|ENST00000529681|MUC5B;ENST00000525715.5_1_11:1244314-1260349:+|nuORF;MUC5B|p.A1645Gfs*130|1|0.48|ENSG00000117983|chr11:1241806-1241807|-/C|frameshift_variant;MUC5B|p.E2447Vfs*233|1|0.15|ENSG00000117983|chr11:1244218-1244219|TG/-|frameshift_variant;MUC5B|p.E2929Gfs*98|1|0.13|ENSG00000117983|chr11:1245660-1245661|-/GC|frameshift_variant;MUC5B|p.F1125Lfs*31|1|0.34|ENSG00000117983|chr11:1238947-1238948|TC/-|frameshift_variant;MUC5B|p.P2717Qfs*3|2|0.21|ENSG00000117983|chr11:1245025-1245025|C/-|frameshift_variant;MUC5B|p.P3417Qfs*3|1|0.41|ENSG00000117983|chr11:1247125-1247125|C/-|frameshift_variant;MUC5B|p.S2205Qfs*54|1|0.2|ENSG00000117983|chr11:1243486-1243487|-/C|frameshift_variant;MUC5B|p.S3126Pfs*13|1|0.37|ENSG00000117983|chr11:1246251-1246251|C/-|frameshift_variant;MUC5B|p.S3878Pfs*27|1|0.13|ENSG00000117983|chr11:1248507-1248507|C/-|frameshift_variant;MUC5B|p.S4017Lfs*56|1|0.22|ENSG00000117983|chr11:1248928-1248929|-/C|frameshift_variant;MUC5B|p.T4706Pfs*4|2|0.37|ENSG00000117983|chr11:1250996-1250996|A/-|frameshift_variant	50.0245360154114	0.3026755932229825	6				NaN	NaN	0	NaN	7541	3285	10826
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10829	29.531	NaN	3698.6	30	0	403.34	0.106	+			17667	IEKLAVEA	8	65	436.75821217849364	NaN	0	436.7580261230469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IEKLAVEA_	ENSG00000166165|ENST00000348956|CKB	62.107414245175825	1.7418937515398478	6				NaN	NaN	0	NaN	7542	3285	10826
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10830	29.533	NaN	3442.2	30	0	474.34	0.106	+			38032	SPPAETHVF	9	62	492.74318182376965	983.4718107143393	2	492.7430725097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SPPAETHVF_	COL12A1|p.F2273Lfs*20|1|0.26|ENSG00000111799|chr6:75124000-75124000|A/-|frameshift_variant;COL12A1|p.G2777Wfs*37|1|0.15|ENSG00000111799|chr6:75102684-75102685|-/G|frameshift_variant;COL12A1|p.G3027Wfs*19|1|0.1|ENSG00000111799|chr6:75087680-75087681|-/G|frameshift_variant;COL12A1|p.L2085Hfs*4|1|0.22|ENSG00000111799|chr6:75128382-75128383|-/T|frameshift_variant;COL12A1|p.P2307Lfs*21|1|0.25|ENSG00000111799|chr6:75123356-75123356|G/-|frameshift_variant;COL12A1|p.T1046Qfs*7|2|0.22|ENSG00000111799|chr6:75156372-75156372|G/-|frameshift_variant;ENSG00000111799|ENST00000322507|COL12A1;nc|ENSG00000111799|Q99715-4|COL12A1	51.33545320467046	0.2872990594074956	6				NaN	NaN	0	NaN	7543	3285	10826
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10831	29.535	NaN	4290.9	30	0	907.8	0.106			+	38719	SSLFQAPAL	9	67	467.2569580078125	NaN	0	467.2569580078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSLFQAPAL_	REV__COL27A1|p.E1076Sfs*7|1|0.43|ENSG00000196739|chr9:114264382-114264382|G/-|frameshift_variant;REV__COL27A1|p.E848Sfs*4|1|0.46|ENSG00000196739|chr9:114231839-114231839|G/-|frameshift_variant;REV__COL27A1|p.P816Lfs*10|1|0.52|ENSG00000196739|chr9:114222243-114222243|C/-|frameshift_variant;REV__COL27A1|p.P918Lfs*9|1|0.21|ENSG00000196739|chr9:114240240-114240240|C/-|frameshift_variant;REV__COL27A1|p.V1419Sfs*148|1|0.14|ENSG00000196739|chr9:114290101-114290101|G/-|frameshift_variant;REV__ENSG00000196739|ENST00000356083|COL27A1;REV__nc|ENSG00000196739|Q8IZC6-3|COL27A1	47.91560031466742	0.22105767942158736	6				NaN	NaN	0	NaN	7544	3285	10826
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10832	29.537	NaN	5663	30	0	940.75	0.106	+			18274	IPIANTEKY	9	63	524.786589643866	1047.558626354532	2	524.7866821289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IPIANTEKY_	ENSG00000082258|ENST00000264157|CCNT2;nc|ENSG00000082258|O60583-2|CCNT2	95.81516180277367	0.04847050768394289	6				NaN	NaN	0	NaN	7545	3285	10826
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10833	29.539	NaN	3851.9	30	0	505.85	0.036	+			28758	NPASGEKFAY	10	66	542.25888922515	1082.5032255171	2	542.25927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NPASGEKFAY_	ENSG00000001630|ENST00000003100|CYP51A1;ENST00000419457.1_1_13:29296686-29297403:-|nuORF;nc|ENSG00000001630|Q16850-2|CYP51A1	129.42129120953632	0.014023551377083414	6				NaN	NaN	0	NaN	7546	3285	10826
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10851	29.576	NaN	9316.7	30	0	2936.4	0.214	+			47441	VPTDEARAF	9	69	503.25415176968994	1004.4937506061799	2	503.25347900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VPTDEARAF_	ENSG00000103769|ENST00000261890|RAB11A;ENSG00000185236|ENST00000328024|RAB11B;nc|ENSG00000103769|P62491-2|RAB11A;nc|ENSG00000185236|Q15907-2|RAB11B	88.17693792209575	0.07000514020414955	6				NaN	NaN	0	NaN	7561	3288	10850
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10852	29.58	NaN	4616.1	30	0	1072.3	0.106	+			22072	KSLDLVTMK	9	71	517.7994392542371	NaN	0	517.799560546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KSLDLVTMK_	ENSG00000125354|ENST00000394610|SEPTIN6;ENSG00000138758|ENST00000264893|SEPTIN11;ENSG00000164402|ENST00000378719|SEPTIN8;ENST00000371478.2_1_5:132097291-132101152:-|nuORF;nc|ENSG00000125354|Q14141-3|SEPTIN6;nc|ENSG00000125354|Q14141-4|SEPTIN6;nc|ENSG00000125354|Q14141|SEPTIN6;nc|ENSG00000138758|Q9NVA2-2|SEPTIN11;nc|ENSG00000164402|Q92599-2|SEPTIN8;nc|ENSG00000164402|Q92599-3|SEPTIN8;nc|ENSG00000164402|Q92599-4|SEPTIN8	84.81729255234993	0.05487683669228034	6				NaN	NaN	0	NaN	7562	3288	10850
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10853	29.582	NaN	21020	30	0	4689.5	0.106	+			40031	STMVDVRVMK	10	57	389.2072979646647	1164.6000644941942	3	389.2069396972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STMVDVRVMK_	ENSG00000085224|ENST00000373344|ATRX;nc|ENSG00000085224|P46100-2|ATRX;nc|ENSG00000085224|P46100-3|ATRX;nc|ENSG00000085224|P46100-4|ATRX;nc|ENSG00000085224|P46100-5|ATRX	80.45461616416974	0.1919067876629769	6				NaN	NaN	0	NaN	7563	3288	10850
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10854	29.583	NaN	5642.9	30	0	1376.5	0.106	+			22324	KTFSEVLAEK	10	71	576.3191983928222	1150.6238438524442	2	576.31884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTFSEVLAEK_	ENSG00000058673|ENST00000367210|ZC3H11A;ZC3H11A|p.H415Tfs*23|1|0.41|ENSG00000058673|chr1:203847375-203847376|-/A|frameshift_variant;ZC3H11A|p.T443Qfs*2|1|0.39|ENSG00000058673|chr1:203847462-203847462|A/-|frameshift_variant	115.23196543181992	0.034063879665207575	6				NaN	NaN	0	NaN	7564	3288	10850
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10855	29.585	NaN	8988.9	30	0	1838.1	0.106	+			11938	FVHPKPVSL	9	75	512.3032284974828	1022.5919040617656	2	512.302978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FVHPKPVSL_	ENSG00000175727|ENST00000319080|MLXIP;ENST00000541750.1_12:122618368-122620257:+|nuORF;MLXIP|p.V645Rfs*84|1|0.4|ENSG00000175727|chr12:122135561-122135562|-/C|frameshift_variant;nc|ENSG00000175727|Q9HAP2-2|MLXIP;nc|ENSG00000175727|Q9HAP2-3|MLXIP;nc|ENSG00000175727|Q9HAP2-4|MLXIP;nc|ENSG00000175727|Q9HAP2-5|MLXIP	42.396135135203025	0.392153681582562	6				NaN	NaN	0	NaN	7565	3288	10850
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10856	29.587	NaN	2772.9	30	0	503.21	0.033	+			37088	SISISVAR	8	60	416.7478036452271	NaN	0	416.74774169921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SISISVAR_	CON__P04264;ENSG00000167768|ENST00000252244|KRT1	37.81151784470057	1.7418937515398478	6				NaN	NaN	0	NaN	7566	3288	10850
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10857	29.588	NaN	9088.4	30	0	1448.1	0.138				-1	 	0	53	445.2588139874327	444.2515375208327	1	445.2581787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7567	3288	10850
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10875	29.627	NaN	912180	30	0	335030	0.133				-1	WMKFLHGKLG	10	122	411.5594676611743	1231.656573583723	3	411.5596618652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_WM(Oxidation (M))KFLHGKLG_	ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC;PRKDC|p.D2437Wfs*3|1|0.11|ENSG00000253729|chr8:47840161-47840162|-/CA|frameshift_variant;PRKDC|p.K3681Nfs*6|1|0.32|ENSG00000253729|chr8:47785174-47785177|TTCT/-|frameshift_variant;PRKDC|p.M3670*|1|0.5|ENSG00000253729|chr8:47785212-47785212|T/-|frameshift_variant;PRKDC|p.M3846Cfs*12|1|0.13|ENSG00000253729|chr8:47779047-47779047|T/-|frameshift_variant;PRKDC|p.M4020Cfs*2|1|0.31|ENSG00000253729|chr8:47776968-47776968|T/-|frameshift_variant;PRKDC|p.N3605Kfs*3|1|0.22|ENSG00000253729|chr8:47788993-47788994|-/T|frameshift_variant;PRKDC|p.N4037Ifs*15|1|0.17|ENSG00000253729|chr8:47776916-47776916|T/-|frameshift_variant;PRKDC|p.R2704Gfs*13|2|0.34|ENSG00000253729|chr8:47834238-47834238|T/-|frameshift_variant;PRKDC|p.S3402Ifs*16|1|0.04|ENSG00000253729|chr8:47799302-47799303|-/AAACCGTGAGTTAGAGGAGGTAA|frameshift_variant;PRKDC|p.S4099Qfs*6|1|0.25|ENSG00000253729|chr8:47774265-47774265|A/-|frameshift_variant;PRKDC|p.T3268Pfs*7|1|0.5|ENSG00000253729|chr8:47803426-47803426|T/-|frameshift_variant;PRKDC|p.W3401Cfs*4|1|0.01|ENSG00000253729|chr8:47799304-47799305|-/AATGAATA|frameshift_variant	36.446750945000026	0.5818864909973037	6				NaN	NaN	0	NaN	7582	3291	10874
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10876	29.629	NaN	60889	30	0	15057	0.106	+			29085	NTMNITISK	9	81	511.27105903660345	1020.5275651400069	2	511.27166748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NTMNITISK_	ENSG00000129003|ENST00000644861|VPS13C;nc|ENSG00000129003|Q709C8-2|VPS13C;nc|ENSG00000129003|Q709C8-3|VPS13C;nc|ENSG00000129003|Q709C8-4|VPS13C;VPS13C|p.E2463Nfs*18|1|0.25|ENSG00000129003|chr15:61920157-61920157|C/-|frameshift_variant;VPS13C|p.N3163Sfs*6|1|0.05|ENSG00000129003|chr15:61882732-61882733|-/TTATCATCAC|frameshift_variant;VPS13C|p.P3597Lfs*3|1|0.26|ENSG00000129003|chr15:61868732-61868732|G/-|frameshift_variant	180.09051358498644	0.0012869539350500664	6				NaN	NaN	0	NaN	7583	3291	10874
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10877	29.631	NaN	40284	30	0	15983	0.106	+			45035	TVGDVLEAK	9	84	466.2585199694186	930.5024870056372	2	466.2585754394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVGDVLEAK_	ENSG00000106348|ENST00000338791|IMPDH1;ENST00000418838.1_1_X:40219448-40219874:-|nuORF;ENST00000440965.1_1_2:202003207-202003609:-|nuORF;IMPDH1|p.A247Gfs*7|1|0.06|ENSG00000106348|chr7:128398490-128398491|-/C|frameshift_variant;nc|ENSG00000106348|P20839-2|IMPDH1;nc|ENSG00000106348|P20839-3|IMPDH1;nc|ENSG00000106348|P20839-4|IMPDH1;nc|ENSG00000106348|P20839-5|IMPDH1;nc|ENSG00000106348|P20839-7|IMPDH1;nc|ENSG00000106348|P20839|IMPDH1	112.10723106719422	0.02684780151337622	6				NaN	NaN	0	NaN	7584	3291	10874
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10878	29.633	NaN	46586	30	0	19688	0.106	+			35403	SAQREEPMAL	10	51	377.8526942335637	1130.536253300891	3	377.8529357910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SAQREEPMAL_	ENST00000493883.5_1_21:45553616-45561277:+|nuORF	37.81151784470057	0.569310847604193	6				NaN	NaN	0	NaN	7585	3291	10874
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10879	29.635	NaN	9329	30	0	1414.3	0.106			+	40446	STVPAVHQKFT	11	78	405.5559625802412	1213.6460583409237	3	405.5556945800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STVPAVHQKFT_	REV__ENSG00000105447|ENST00000253237|GRWD1	47.227680397652996	0.4590463137409202	6				NaN	NaN	0	NaN	7586	3291	10874
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10880	29.637	NaN	12665	30	0	3203.7	0.106	+			4350	ATGRAFLFNK	10	66	375.54554000447763	1123.614790613633	3	375.5455322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATGRAFLFNK_	ENSG00000119801|ENST00000261353|YPEL5	35.15202426646627	0.5927656479315102	6				NaN	NaN	0	NaN	7587	3291	10874
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10881	29.639	NaN	10810	30	0	2170.8	0.035			+	24686	LHALQTFSK	9	70	522.7959183523127	1043.5772837714253	2	522.7966918945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LHALQTFSK_	REV__ENSG00000176083|ENST00000349618|ZNF683;REV__nc|ENSG00000176083|Q8IZ20|ZNF683	60.97194046774394	0.20551255781574032	6				NaN	NaN	0	NaN	7588	3291	10874
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10899	29.674	NaN	13702	30	0	2090.5	0.214	+			38844	SSNLFVTGK	9	76	476.75894751979723	951.5033421063945	2	476.7583923339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSNLFVTGK_	ENST00000451596.2_1_9:74929993-74930062:+|nuORF	117.7056744995986	0.022588689529990102	6				NaN	NaN	0	NaN	7603	3294	10898
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10900	29.678	NaN	8437.7	30	0	1819.9	0.106	+			33713	RPFERTITM	9	74	575.8059352859204	1149.5973176386408	2	575.8057861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RPFERTITM_	ENSG00000137575|ENST00000260130|SDCBP;ENST00000523441.1_1_8:59490633-59492419:+|nuORF;nc|ENSG00000137575|O00560-2|SDCBP;nc|ENSG00000137575|O00560-3|SDCBP	36.446750945000026	0.4619375763483977	6				NaN	NaN	0	NaN	7604	3294	10898
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10901	29.68	NaN	21280	30	0	6029	0.106	+			15518	GVCSTLTIK	9	73	489.7678804403146	977.5212079474293	2	489.7676696777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_GVC(Carbamidomethyl (C))STLTIK_	ENST00000589011.1_1_7:20201474-20224697:-|nuORF	112.41091882917199	0.026537921851008135	6				NaN	NaN	0	NaN	7605	3294	10898
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10902	29.682	NaN	6970.2	30	0	871.13	0.106	+			19141	IYNGKVTSI	9	67	497.7822213484764	993.5498897637528	2	497.781982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IYNGKVTSI_	ENSG00000067596|ENST00000262415|DHX8;ENST00000587044.1_1_17:41568567-41594747:+|nuORF	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	7606	3294	10898
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10903	29.683	NaN	2194.6	30	0	155.92	0.106	+			51317	YSKSSGALHKR	11	57	617.3369140625	NaN	0	617.3369140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YSKSSGALHKR_	MAP10|p.P480del|1|0.11|ENSG00000212916|chr1:232806459-232806461|CTC/-|inframe_deletion	35.999914995658735	0.4049796424356395	6				NaN	NaN	0	NaN	7607	3294	10898
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10904	29.685	NaN	14087	30	0	5182.2	0.038	+			16801	HPDEKSIITY	10	79	601.8063826798904	1201.5982124265806	2	601.8070678710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HPDEKSIITY_	ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1;SPTBN1|p.K503Rfs*24|1|0.06|ENSG00000115306|chr2:54626095-54626095|G/-|frameshift_variant	155.5846463517096	0.00750394161302585	6				NaN	NaN	0	NaN	7608	3294	10898
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10905	29.686	NaN	2631.3	30	0	814.17	0.142	+			8081	DVRNPVIYAV	10	59	573.3192749023438	NaN	0	573.3192749023438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DVRNPVIYAV_	ENSG00000001617|ENST00000002829|SEMA3F;nc|ENSG00000001617|Q13275-2|SEMA3F	58.78195531508484	0.24422493511477816	6				NaN	NaN	0	NaN	7609	3294	10898
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10923	29.724	NaN	50192	30	0	13776	0.214	+			28442	NEVPVKEL	8	84	464.26091261251736	926.5072722918347	2	464.26068115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NEVPVKEL_	ENSG00000108829|ENST00000225972|LRRC59	148.98678547993487	0.23009633913008076	6				NaN	NaN	0	NaN	7624	3297	10922
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10924	29.728	NaN	13302	30	0	3502.1	0.106	+			15519	GVCSTLTIK	9	74	489.7678804403146	977.5212079474293	2	489.7677917480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GVC(Carbamidomethyl (C))STLTIK_	ENST00000589011.1_1_7:20201474-20224697:-|nuORF	93.1432384553994	0.056003526918089595	6				NaN	NaN	0	NaN	7625	3297	10922
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10925	29.73	NaN	14445	30	0	2117	0.106	+			43780	TLKFVHTSF	9	66	360.53441115071024	1078.5814040523308	3	360.534423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TLKFVHTSF_	ENSG00000165434|ENST00000298198|PGM2L1;PGM2L1|p.S299Lfs*19|1|0.24|ENSG00000165434|chr11:74347192-74347192|A/-|frameshift_variant	37.15910966729921	0.4535818937225704	6				NaN	NaN	0	NaN	7626	3297	10922
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10926	29.732	NaN	18121	30	0	11741	0.106	+			17390	IAPGVTHEL	9	64	468.761068391174	935.507583849148	2	468.7608642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IAPGVTHEL_	ENSG00000100299|ENST00000216124|ARSA;nc|ENSG00000100299|P15289-2|ARSA;nc|ENSG00000100299|P15289|ARSA	90.77665401227738	0.06267569666681755	6				NaN	NaN	0	NaN	7627	3297	10922
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10927	29.734	NaN	5381.8	30	0	1904.9	0.106	+			37398	SLGAWPGPPGG	11	66	498.2511316206496	994.4877103080992	2	498.2506408691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SLGAWPGPPGG_	ENST00000469750.5_1_7:2580597-2582612:-|nuORF	35.61828744233558	0.616184410043185	6				NaN	NaN	0	NaN	7628	3297	10922
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10928	29.736	NaN	4678.2	30	0	2706.6	0.035			+	16631	HHGCKEYK	8	52	501.2342255066827	1000.4538980801655	2	501.2336120605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HHGCKEYK_	REV__ENSG00000196081|ENST00000418100|ZNF724	24.20275056022122	0.7724576178584145	6				NaN	NaN	0	NaN	7629	3297	10922
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10929	29.736	NaN	4801.5	30	0	1400	0.144			+	-1	AGMRMTPIKML	11	49	422.2224394577616	NaN	0	422.2225036621094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_AGMRMTPIKM(Oxidation (M))L_	REV__ENST00000293328.7_1_17:40351843-40352023:-|nuORF	35.17822180527639	0.40864158092774266	6				NaN	NaN	0	NaN	7630	3297	10922
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10947	29.775	NaN	22540	30	0	3994.3	0.214	+			16375	HENEDIYKL	9	79	580.7829431371097	1159.5513333410192	2	580.7831420898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HENEDIYKL_	ENSG00000102753|ENST00000261667|KPNA3;ENSG00000186432|ENST00000334256|KPNA4	199.8913184727681	3.377773596966937E-05	6				NaN	NaN	0	NaN	7645	3300	10946
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10948	29.778	NaN	5087.5	30	0	2143.7	0.106	+			31040	QEVKVQTAAL	10	63	543.8119975200066	1085.609442106813	2	543.8123168945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QEVKVQTAAL_	ENSG00000102753|ENST00000261667|KPNA3;ENSG00000186432|ENST00000334256|KPNA4;KPNA3|p.N437Tfs*3|2|0.41|ENSG00000102753|chr13:49705683-49705683|T/-|frameshift_variant;KPNA4|p.M441Wfs*9|1|0.12|ENSG00000186432|chr3:160508158-160508158|T/-|frameshift_variant	56.43379154798735	0.3982744522255666	6				NaN	NaN	0	NaN	7646	3300	10946
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10949	29.781	NaN	4702.3	30	0	780.43	0.106	+			51195	YPLEGSRSY	9	74	536.2595881172714	NaN	0	536.2597045898438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YPLEGSRSY_	ENSG00000170677|ENST00000397942|SOCS6	79.71258880314673	0.07236858429579222	6				NaN	NaN	0	NaN	7647	3300	10946
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10950	29.782	NaN	4614.6	30	0	309.34	0.106	+			24276	LEVQGPVSL	9	68	471.2687621482019	940.5229713632039	2	471.2687072753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LEVQGPVSL_	ENSG00000053747|ENST00000313654|LAMA3;nc|ENSG00000053747|Q16787-1|LAMA3;nc|ENSG00000053747|Q16787-3|LAMA3;nc|ENSG00000053747|Q16787-4|LAMA3	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	7648	3300	10946
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10951	29.784	NaN	2094.3	30	0	643.71	0.106	+			17182	HTQVLFIAK	9	63	528.8142004902583	1055.6138480473164	2	528.8141479492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HTQVLFIAK_	ENSG00000105388|ENST00000221992|CEACAM5;nc|ENSG00000105388|P06731-2|CEACAM5	37.81151784470057	0.4459294069877048	6				NaN	NaN	0	NaN	7649	3300	10946
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10952	29.786	NaN	1740.4	30	0	350.22	0.035	+			48275	VTDNSIFSK	9	54	505.7609884060806	1009.5074238789613	2	505.7612609863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTDNSIFSK_	ENSG00000110619|ENST00000380525|CARS1;ENST00000439280.6_1_11:3050478-3078655:-|nuORF;ENST00000526890.5_1_11:3050224-3063461:-|nuORF;ENST00000531387.5_1_11:3022346-3069017:-|nuORF;nc|ENSG00000110619|P49589-2|CARS1;nc|ENSG00000110619|P49589|CARS1	32.75053402867276	0.49717649897795874	6				NaN	NaN	0	NaN	7650	3300	10946
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10953	29.787	NaN	3070.7	30	0	552.12	0.141			+	29923	PLTDAPTKPH	10	70	538.7904161293101	1075.56627932542	2	538.790771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PLTDAPTKPH_	REV__ENSG00000173320|ENST00000308497|STOX2;REV__nc|ENSG00000173320|Q9P2F5-2|STOX2	49.44154591367651	0.46214596422418036	6				NaN	NaN	0	NaN	7651	3300	10946
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10971	29.823	NaN	12862	30	0	3370.2	0.214	+			1922	AISAGLIAK	9	67	422.26854013871656	842.5225273442331	2	422.26849365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AISAGLIAK_	ENSG00000204219|ENST00000450454|TCEA3	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	7666	3303	10970
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10972	29.827	NaN	14379	30	0	2846.5	0.106	+			47495	VQGVISVPK	9	80	463.7869671309818	NaN	0	463.7868957519531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VQGVISVPK_	ENSG00000168237|ENST00000436784|GLYCTK;nc|ENSG00000168237|Q8IVS8-2|GLYCTK;nc|ENSG00000168237|Q8IVS8-3|GLYCTK;nc|ENSG00000168237|Q8IVS8-4|GLYCTK;nc|ENSG00000168237|Q8IVS8-7|GLYCTK	120.8684288430529	0.001996491448359331	6				NaN	NaN	0	NaN	7667	3303	10970
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10973	29.829	NaN	5335.5	30	0	1006.3	0.106				-1	ELLCIDVR	8	74	509.27297889027403	1016.5314048473481	2	509.273681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_ELLC(Carbamidomethyl (C))IDVR_	nc|ENSG00000186522|Q9P0V9-2|SEPTIN10	49.44154591367651	0.597725784090933	6				NaN	NaN	0	NaN	7668	3303	10970
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10974	29.831	NaN	8996.1	30	0	1415.4	0.106	+			17721	IENGKVVSI	9	75	479.7821397143477	957.5497264954954	2	479.7815856933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IENGKVVSI_	ENSG00000176658|ENST00000318217|MYO1D	140.11223852658463	0.010427410095706195	6				NaN	NaN	0	NaN	7669	3303	10970
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10975	29.833	NaN	3267.8	30	0	859.26	0.106	+			40676	SVASISLTK	9	60	453.26870482695654	904.5228567207131	2	453.2682800292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVASISLTK_	ENST00000298289.6_1_14:50085755-50087389:-|nuORF	35.15202426646627	0.4747332964206883	6				NaN	NaN	0	NaN	7670	3303	10970
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10976	29.834	NaN	2866.6	30	0	469.77	0.106				-1	 	0	62	394.2333862545663	786.4522195759326	2	394.2327880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7671	3303	10970
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10977	29.836	NaN	2643.4	30	0	1249.5	0.035	+			49104	VVLGNIIKK	9	24	328.5586763730963	982.654199719489	3	328.5584411621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VVLGNIIKK_	ENSG00000069424|ENST00000378083|KCNAB2;nc|ENSG00000069424|Q13303-2|KCNAB2;nc|ENSG00000069424|Q13303-4|KCNAB2;nc|ENSG00000069424|Q13303-5|KCNAB2;nc|ENSG00000069424|Q13303|KCNAB2	47.657333605630114	0.33044192980041115	6				NaN	NaN	0	NaN	7672	3303	10970
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10995	29.872	NaN	4389.4	30	0	1785.7	0.214	+			12228	GASDVVLYK	9	69	476.2608099204333	NaN	0	476.2607727050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GASDVVLYK_	ENSG00000116120|ENST00000281828|FARSB;FARSB|p.I265*|1|0.36|ENSG00000116120|chr2:222630168-222630168|T/-|frameshift_variant;FARSB|p.I364Nfs*7|1|0.04|ENSG00000116120|chr2:222624353-222624354|-/AACACTCCTTATTG|frameshift_variant	85.16082228582465	0.053699699744190164	6				NaN	NaN	0	NaN	7687	3306	10994
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10996	29.876	NaN	6230.6	30	0	1384	0.106			+	37357	SLFELLPF	8	69	483.26861301884463	NaN	0	483.2684326171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLFELLPF_	REV__ENSG00000104408|ENST00000220849|EIF3E;REV__ENST00000518442.5_1_8:109247181-109261015:-|nuORF;REV__ENST00000519030.5_1_8:109252301-109260916:-|nuORF	33.51558372728122	1.7418937515398478	6				NaN	NaN	0	NaN	7688	3306	10994
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10997	29.878	NaN	7329.9	30	0	475.55	0.106	+			34785	RYLDKTEQW	9	84	619.8121247842676	1237.609696635335	2	619.811767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RYLDKTEQW_	CON__P01030;ENSG00000224389|ENST00000435363|C4B;ENSG00000244731|ENST00000428956|C4A;nc|ENSG00000244731|P0C0L4-2|C4A	106.88024417677582	0.032181361622142884	6				NaN	NaN	0	NaN	7689	3306	10994
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10998	29.88	NaN	11728	30	0	1507.6	0.106	+			12554	GEGHFGKVEL	10	75	536.774987489169	1071.535422045138	2	536.77587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEGHFGKVEL_	ENSG00000162434|ENST00000342505|JAK1;ENST00000481702.1_1_1:65305238-65306936:-|nuORF	74.1650062923329	0.2432923583094885	6				NaN	NaN	0	NaN	7690	3306	10994
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10999	29.882	NaN	2727.4	30	0	305.96	0.106			+	-1	RGGVGCHCGY	10	66	533.2205084431755	1064.426463953151	2	533.2208251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_RGGVGCHC(Carbamidomethyl (C))GY_	REV__ENSG00000188257|ENST00000482011|PLA2G2A	27.882242232435846	0.6521336255503853	6				NaN	NaN	0	NaN	7691	3306	10994
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11000	29.883	NaN	3064.2	30	0	356.95	0.034	+			26675	LVGLPTAPGL	10	55	469.2896346105124	936.5647162878248	2	469.28924560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LVGLPTAPGL_	ENSG00000182083|ENST00000319423|OR6B2;OR6B2|p.H56Pfs*21|1|0.32|ENSG00000182083|chr2:240030263-240030264|-/G|frameshift_variant	29.14955571784316	0.6417842315402807	6				NaN	NaN	0	NaN	7692	3306	10994
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11001	29.884	NaN	2995.8	30	0	337.9	0.14	+			25527	LPTENVDKM	9	59	523.7634771101516	1045.512401287103	2	523.763427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LPTENVDKM_	ENSG00000198420|ENST00000479870|TCAF1;ENST00000392900.3_1_7:143551228-143582358:-|nuORF;ENST00000414990.2_3_7:143295168-143301929:+|nuORF;nc|ENSG00000198420|Q9Y4C2-2|TCAF1	63.53385203322761	0.18415635464017938	6				NaN	NaN	0	NaN	7693	3306	10994
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11019	29.923	NaN	24536	30	0	2253	0.214	+			50413	YAAQASQAL	9	72	461.73527594059476	921.4559989479895	2	461.73504638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YAAQASQAL_	ENSG00000118705|ENST00000237530|RPN2;ENST00000462163.1_1_20:35807747-35832332:+|nuORF;RPN2|p.G196Afs*41|1|0.12|ENSG00000118705|chr20:37204794-37204794|G/-|frameshift_variant	162.25246889848123	0.0040893836092247005	6				NaN	NaN	0	NaN	7708	3309	11018
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11020	29.927	NaN	94595	30	0	35928	0.106	+			46849	VIFTGGVGK	9	69	439.26071890327273	876.5068848733455	2	439.26068115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VIFTGGVGK_	ENSG00000134255|ENST00000357172|CEPT1;ENST00000473474.5_1_1:111715860-111726929:+|nuORF	127.46168284122857	0.016682644177004526	6				NaN	NaN	0	NaN	7709	3309	11018
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11021	29.929	NaN	5294.2	30	0	709.2	0.106	+			28267	NDTFVHVT	8	67	466.7275063774302	931.4404598216604	2	466.7272033691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NDTFVHVT_	ENSG00000164587|ENST00000407193|RPS14;ENST00000519690.1_1_5:149827146-149827347:-|nuORF	82.24051045832904	0.30490469762271794	6				NaN	NaN	0	NaN	7710	3309	11018
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11022	29.931	NaN	2103.1	30	0	173.95	0.106			+	10138	ESRALGVL	8	53	422.7480138872421	843.4814748412842	2	422.7478332519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ESRALGVL_	REV__SERAC1|p.I179V|1|0.1|ENSG00000122335|chr6:158144373-158144373|T/C|missense_variant	51.33545320467046	0.5859736979383976	6				NaN	NaN	0	NaN	7711	3309	11018
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11023	29.933	NaN	2728.2	30	0	494.25	0.106	+			42245	TAAPPAQPL	9	50	433.2426209477224	864.4706889622448	2	433.242431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TAAPPAQPL_	BRD2|p.G595Vfs*6|1|0.59|ENSG00000204256|chr6:32978327-32978327|G/-|frameshift_variant;ENSG00000204256|ENST00000374825|BRD2;nc|ENSG00000204256|P25440-2|BRD2;nc|ENSG00000204256|P25440-3|BRD2;nc|ENSG00000204256|P25440-4|BRD2	58.78195531508484	0.22376836668196862	6				NaN	NaN	0	NaN	7712	3309	11018
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11024	29.934	NaN	14739	30	0	3227.8	0.037			+	35298	SAMEPLIESE	10	58	369.17476526184606	1104.5024663857382	3	369.1750183105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SAMEPLIESE_	REV__ENSG00000173821|ENST00000582970|RNF213;REV__ENST00000411702.7_1_17:78356744-78367295:+|nuORF;REV__ENST00000427003.7_1_17:78356226-78367295:+|nuORF;REV__ENST00000560083.1_1_17:78362921-78367295:+|nuORF;REV__nc|ENSG00000173821|Q63HN8-4|RNF213;REV__nc|ENSG00000173821|Q63HN8-6|RNF213;REV__nc|ENSG00000173821|Q63HN8|RNF213	33.921630207806714	0.6028135429846169	6				NaN	NaN	0	NaN	7713	3309	11018
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11025	29.935	NaN	2098.9	30	0	238.33	0.14			+	-1	ICVLCSCAY	9	59	516.2196636490736	NaN	0	516.2198486328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_IC(Carbamidomethyl (C))VLCSCAY_	REV__OR14K1|p.F206C|1|0.27|ENSG00000153230|chr1:247739231-247739231|T/G|missense_variant	40.5726180659479	0.27166212580479165	6				NaN	NaN	0	NaN	7714	3309	11018
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11043	29.973	NaN	6481.2	30	0	2338.9	0.214	+			39134	SSVFLAIKK	9	49	331.5427978457561	991.6065641374685	3	331.5428161621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSVFLAIKK_	ENST00000274030.10_1_4:120160492-120160642:+|nuORF	37.15910966729921	0.4535818937225704	6				NaN	NaN	0	NaN	7729	3312	11042
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11044	29.977	NaN	7526.3	30	0	1558.7	0.106				-1	WMKFLHGKLG	10	74	411.5594676611743	1231.656573583723	3	411.5591735839844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_WM(Oxidation (M))KFLHGKLG_	ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC;PRKDC|p.D2437Wfs*3|1|0.11|ENSG00000253729|chr8:47840161-47840162|-/CA|frameshift_variant;PRKDC|p.K3681Nfs*6|1|0.32|ENSG00000253729|chr8:47785174-47785177|TTCT/-|frameshift_variant;PRKDC|p.M3670*|1|0.5|ENSG00000253729|chr8:47785212-47785212|T/-|frameshift_variant;PRKDC|p.M3846Cfs*12|1|0.13|ENSG00000253729|chr8:47779047-47779047|T/-|frameshift_variant;PRKDC|p.M4020Cfs*2|1|0.31|ENSG00000253729|chr8:47776968-47776968|T/-|frameshift_variant;PRKDC|p.N3605Kfs*3|1|0.22|ENSG00000253729|chr8:47788993-47788994|-/T|frameshift_variant;PRKDC|p.N4037Ifs*15|1|0.17|ENSG00000253729|chr8:47776916-47776916|T/-|frameshift_variant;PRKDC|p.R2704Gfs*13|2|0.34|ENSG00000253729|chr8:47834238-47834238|T/-|frameshift_variant;PRKDC|p.S3402Ifs*16|1|0.04|ENSG00000253729|chr8:47799302-47799303|-/AAACCGTGAGTTAGAGGAGGTAA|frameshift_variant;PRKDC|p.S4099Qfs*6|1|0.25|ENSG00000253729|chr8:47774265-47774265|A/-|frameshift_variant;PRKDC|p.T3268Pfs*7|1|0.5|ENSG00000253729|chr8:47803426-47803426|T/-|frameshift_variant;PRKDC|p.W3401Cfs*4|1|0.01|ENSG00000253729|chr8:47799304-47799305|-/AATGAATA|frameshift_variant	23.52269567125451	0.6877354443478558	6				NaN	NaN	0	NaN	7730	3312	11042
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11045	29.979	NaN	4923.1	30	0	444.33	0.106	+			28827	NPNEEVARF	9	75	538.2624658730789	1074.5103788129577	2	538.2628784179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NPNEEVARF_	ENSG00000110195|ENST00000393676|FOLR1;ENSG00000165457|ENST00000298223|FOLR2	85.86182877749512	0.07653218437724067	6				NaN	NaN	0	NaN	7731	3312	11042
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11046	29.981	NaN	5109.2	30	0	631.07	0.106	+			14673	GTIEVSVVK	9	70	466.27742059675353	930.5402882603071	2	466.27679443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTIEVSVVK_	ENSG00000109452|ENST00000262992|INPP4B;ENST00000512630.5_1_4:143191861-143226631:-|nuORF;INPP4B|p.K530Efs*15|1|0.23|ENSG00000109452|chr4:142145972-142145973|-/C|frameshift_variant	101.25262130126117	0.03792372629710479	6				NaN	NaN	0	NaN	7732	3312	11042
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11047	29.983	NaN	817.19	30	0	70.542	0.106	+			34622	RVQDIFTAGK	10	51	567.8173242498337	1133.6200955664674	2	567.8173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RVQDIFTAGK_	ENSG00000092068|ENST00000316902|SLC7A8;nc|ENSG00000092068|Q9UHI5-4|SLC7A8	58.2462437865262	0.38179041844353556	6				NaN	NaN	0	NaN	7733	3312	11042
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11048	29.984	NaN	4909.3	30	0	802.52	0.035	+			37424	SLGQLSSSRA	10	73	503.27156980239835	1004.5285866715967	2	503.27203369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLGQLSSSRA_	ENSG00000146410|ENST00000420702|MTFR2	91.26522074875469	0.12383023862516404	6				NaN	NaN	0	NaN	7734	3312	11042
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11049	29.985	NaN	3339.4	30	0	735.43	0.141	+			13666	GNSGHFTIIY	10	70	554.7744412780555	1107.534329622911	2	554.7747802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GNSGHFTIIY_	CTSC|p.F302Lfs*27|1|0.1|ENSG00000109861|chr11:88294495-88294496|-/A|frameshift_variant;CTSC|p.N427Kfs*9|1|0.09|ENSG00000109861|chr11:88294117-88294118|-/T|frameshift_variant;CTSC|p.V126Gfs*3|1|0.2|ENSG00000109861|chr11:88312496-88312497|-/C|frameshift_variant;ENSG00000109861|ENST00000227266|CTSC;ENST00000393301.4_1_11:88059607-88070840:-|nuORF;ENST00000534131.1_1_11:88068041-88070840:-|nuORF;nc|ENSG00000109861|P53634-2|CTSC;nc|ENSG00000109861|P53634-3|CTSC	47.95952297671804	0.47580206326914537	6				NaN	NaN	0	NaN	7735	3312	11042
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11067	30.024	NaN	34012	30	0	3980.5	0.214	+			11134	FGADARAL	8	91	410.71937269270984	819.4241924522197	2	410.7190856933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FGADARAL_	ENSG00000144381|ENST00000388968|HSPD1;ENST00000461097.1_1_2:198361816-198363572:-|nuORF;ENST00000476746.5_1_2:198360008-198364584:-|nuORF;HSPD1|p.G441Vfs*14|1|0.04|ENSG00000144381|chr2:197488385-197488385|C/-|frameshift_variant;nc|ENSG00000144381|P10809-2|HSPD1	82.24051045832904	0.30490469762271794	6				NaN	NaN	0	NaN	7750	3315	11066
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11068	30.028	NaN	15990	30	0	2840.1	0.106	+			6111	AVNNMFVSK	9	95	505.26039385606106	1008.5062347789221	2	505.26031494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVNNMFVSK_	ENSG00000100744|ENST00000555181|GSKIP	143.37361013837676	0.008897369944672323	6				NaN	NaN	0	NaN	7751	3315	11066
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11069	30.03	NaN	6280.1	30	0	721.57	0.106				-1	 	0	54	402.7002208344885	803.385888735777	2	402.699951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7752	3315	11066
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11070	30.032	NaN	2788.2	30	0	645.36	0.106	+			15734	GVSAAFAVK	9	57	425.2449573175822	848.4753617019644	2	425.24493408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GVSAAFAVK_	BZW1|p.L189P|1|0.05|ENSG00000082153|chr2:200818001-200818001|T/C|missense_variant;BZW1|p.N285Tfs*11|2|0.26|ENSG00000082153|chr2:200818782-200818782|A/-|frameshift_variant;BZW1|p.N286*|1|0.04|ENSG00000082153|chr2:200818790-200818791|-/T|frameshift_variant;BZW1|p.S325Rfs*19|1|0.04|ENSG00000082153|chr2:200819989-200819990|-/ACAATATAGAA|frameshift_variant;ENSG00000082153|ENST00000409600|BZW1;nc|ENSG00000082153|Q7L1Q6-2|BZW1;nc|ENSG00000082153|Q7L1Q6-3|BZW1;nc|ENSG00000082153|Q7L1Q6-4|BZW1	49.44154591367651	0.3095138337212152	6				NaN	NaN	0	NaN	7753	3315	11066
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11071	30.033	NaN	6557.4	30	0	1355.4	0.106	+			36822	SIERLPVY	8	60	488.77648052825384	NaN	0	488.7763977050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SIERLPVY_	ENSG00000152256|ENST00000282077|PDK1;nc|ENSG00000152256|Q15118-2|PDK1;PDK1|p.A406D|1|0.45|ENSG00000152256|chr2:172595875-172595875|C/A|missense_variant	51.33545320467046	1.7418937515398478	6				NaN	NaN	0	NaN	7754	3315	11066
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11072	30.035	NaN	2797	30	0	187.98	0.035	+			8664	EDSRRSSLP	9	68	523.7634771101516	1045.512401287103	2	523.7637329101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EDSRRSSLP_	ENSG00000215595|ENST00000400633|C20orf202	37.15910966729921	0.4535818937225704	6				NaN	NaN	0	NaN	7755	3315	11066
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11073	30.036	NaN	3302.8	30	0	596.05	0.139	+			18982	IVSGVVGCVI	10	59	473.27581726937615	944.5370816055523	2	473.2754211425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IVSGVVGCVI_	ENSG00000198695|ENST00000361681|MT-ND6	47.91560031466742	0.4762067885998563	6				NaN	NaN	0	NaN	7756	3315	11066
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11091	30.075	NaN	43870	30	0	10515	0.214	+			16226	HEDLGHVAL	9	93	495.75404304629757	989.4935331593952	2	495.75360107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HEDLGHVAL_	ENSG00000128731|ENST00000261609|HERC2;ENST00000428453.5_1_15:20588586-20667676:-|nuORF;ENST00000430598.5_1_15:20613931-20667676:-|nuORF;ENST00000524476.5_1_15:28882105-28886289:+|nuORF;ENST00000529353.1_1_15:28878360-28886587:+|nuORF;ENST00000529624.5_3_15:28877823-28916776:+|nuORF;ENST00000562687.6_3_16:32769598-32772029:+|nuORF;HERC2|p.G2202Afs*8|1|0.2|ENSG00000128731|chr15:28213923-28213923|C/-|frameshift_variant;HERC2|p.K1446R|1|0.36|ENSG00000128731|chr15:28233678-28233678|T/C|missense_variant;nc|ENSG00000290376|Q9BVR0|HERC2P3	94.00642277110589	0.05356993013874309	6				NaN	NaN	0	NaN	7771	3318	11090
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11092	30.079	NaN	6311.5	30	0	873.76	0.106	+			50795	YENTKLLSA	9	65	519.7770252813765	1037.539497629553	2	519.7774658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YENTKLLSA_	ENSG00000127324|ENST00000247829|TSPAN8;ENST00000552128.2_1_12:71519116-71532942:-|nuORF	93.5975768576971	0.05472259948179787	6				NaN	NaN	0	NaN	7772	3318	11090
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11093	30.081	NaN	6899.3	30	0	1417.1	0.106	+			38494	SSATLNSIVAK	11	70	545.8092837709528	1089.6040146087055	2	545.8094482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSATLNSIVAK_	ENSG00000007944|ENST00000356840|MYLIP;MYLIP|p.K199Rfs*26|1|0.07|ENSG00000007944|chr6:16143150-16143151|-/GAATT|frameshift_variant;MYLIP|p.R317Kfs*8|1|0.09|ENSG00000007944|chr6:16145014-16145015|-/A|frameshift_variant	139.15298810987372	0.0005758918642827448	6				NaN	NaN	0	NaN	7773	3318	11090
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11094	30.083	NaN	3476.9	30	0	1264.6	0.106	+			16802	HPDEKSIITY	10	62	601.8063826798904	1201.5982124265806	2	601.806396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HPDEKSIITY_	ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1;SPTBN1|p.K503Rfs*24|1|0.06|ENSG00000115306|chr2:54626095-54626095|G/-|frameshift_variant	58.22992032128504	0.38193887838457763	6				NaN	NaN	0	NaN	7774	3318	11090
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11095	30.085	NaN	10917	30	0	1807.8	0.106	+			10499	EVSKIVQTY	9	70	533.7925318014351	1065.57051066967	2	533.7930908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EVSKIVQTY_	ENSG00000072110|ENST00000394419|ACTN1;nc|ENSG00000072110|P12814-2|ACTN1;nc|ENSG00000072110|P12814-4|ACTN1;nc|ENSG00000072110|P12814|ACTN1	199.70438780651162	3.456851077920069E-05	6				NaN	NaN	0	NaN	7775	3318	11090
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11096	30.086	NaN	3000.2	30	0	261.53	0.034	+			28222	NAVKVTPSL	9	60	464.77720526315437	927.5398575931088	2	464.7765808105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NAVKVTPSL_	ARFGEF3|p.E1064Sfs*10|1|0.29|ENSG00000112379|chr6:138291869-138291869|C/-|frameshift_variant;ARFGEF3|p.F1125*|1|0.07|ENSG00000112379|chr6:138293997-138293998|TT/-|frameshift_variant;ARFGEF3|p.P355Hfs*11|1|0.44|ENSG00000112379|chr6:138255724-138255724|C/-|frameshift_variant;ENSG00000112379|ENST00000251691|ARFGEF3	60.11826168202944	0.21262886028301267	6				NaN	NaN	0	NaN	7776	3318	11090
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11097	30.087	NaN	4162.8	30	0	863.38	0.143	+			33552	RLFEGIIKGK	10	65	387.576546224102	1159.707809272506	3	387.57647705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RLFEGIIKGK_	CASK|p.N757Tfs*40|1|0.18|ENSG00000147044|chrX:41534753-41534753|T/-|frameshift_variant;ENSG00000147044|ENST00000378163|CASK;ENST00000486402.1_1_X:41519640-41524682:-|nuORF;nc|ENSG00000147044|O14936-2|CASK;nc|ENSG00000147044|O14936-3|CASK;nc|ENSG00000147044|O14936-4|CASK;nc|ENSG00000147044|O14936-6|CASK	47.227680397652996	0.4825456260682108	6				NaN	NaN	0	NaN	7777	3318	11090
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11115	30.125	NaN	48085	30	0	10659	0.196	+			17221	HVIETLIGK	9	89	505.3056521464774	1008.5967513597549	2	505.3055725097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HVIETLIGK_	ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5	90.60085204095205	0.06317133949006545	6				NaN	NaN	0	NaN	7792	3321	11114
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11116	30.128	NaN	45184	30	0	10248	0.106	+			48304	VTEGSFVYK	9	78	515.2663016516877	1028.5180503701754	2	515.2662963867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTEGSFVYK_	ENSG00000057608|ENST00000380191|GDI2;GDI2|p.S222Afs*20|1|0.1|ENSG00000057608|chr10:5785197-5785197|T/-|frameshift_variant	180.86945649972546	0.001208757763874378	6				NaN	NaN	0	NaN	7793	3321	11114
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11117	30.13	NaN	30665	30	0	18447	0.106			+	39169	SSYATLCEK	9	79	501.2342255066827	1000.4538980801655	2	501.2337646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSYATLCEK_	REV__ENST00000495428.5_1_3:28333426-28360268:+|nuORF	60.11826168202944	0.21262886028301267	6				NaN	NaN	0	NaN	7794	3321	11114
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11118	30.132	NaN	7129.7	30	0	556.64	0.106	+			8567	EAWASKDATY	10	67	571.2618463812246	1140.509139829249	2	571.2618408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EAWASKDATY_	ENSG00000166508|ENST00000303887|MCM7;nc|ENSG00000166508|P33993-3|MCM7	155.5846463517096	0.00750394161302585	6				NaN	NaN	0	NaN	7795	3321	11114
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11119	30.134	NaN	14349	30	0	3926	0.106	+			1936	AISEYIATK	9	74	498.2742315536704	994.5339101741408	2	498.2738952636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AISEYIATK_	ENSG00000095002|ENST00000233146|MSH2;MSH2|p.M813Nfs*11|1|0.17|ENSG00000095002|chr2:47478497-47478498|-/A|frameshift_variant;MSH2|p.T806Kfs*4|1|0.2|ENSG00000095002|chr2:47478472-47478478|CACTCAC/-|frameshift_variant;nc|ENSG00000095002|P43246-2|MSH2	78.26377905018397	0.10505600812668463	6				NaN	NaN	0	NaN	7796	3321	11114
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11120	30.136	NaN	10967	30	0	6896.4	0.106	+			18513	ISKEFVLGR	9	48	350.20984663363276	1047.6077105010984	3	350.209716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ISKEFVLGR_	ENST00000524717.5_1_11:95826530-95826638:-|nuORF	32.81241826257853	0.4965981579233955	6				NaN	NaN	0	NaN	7797	3321	11114
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11121	30.138	NaN	3625.1	30	0	568.51	0.034	+			48766	VTVSTPLCK	9	67	474.2651719126609	946.5157908921218	2	474.2644958496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VTVSTPLCK_	ENST00000537239.2_1_9:37588826-37588874:-|nuORF	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	7798	3321	11114
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11139	30.173	NaN	23321	30	0	11482	0.214	+			32212	QTAGNVFLK	9	82	489.2749100957558	976.5352672583116	2	489.2742004394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QTAGNVFLK_	ENSG00000120686|ENST00000239878|UFM1;nc|ENSG00000120686|P61960-2|UFM1	74.25504064058377	0.12238981753128622	6				NaN	NaN	0	NaN	7813	3324	11138
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11140	30.177	NaN	42827	30	0	6486.8	0.106	+			8195	EAAVAIKAM	9	87	452.25224153117546	902.4899301291509	2	452.2518005371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EAAVAIKAM_	ENSG00000132507|ENST00000336458|EIF5A;ENSG00000253626|ENST00000520547|EIF5AL1;nc|ENSG00000132507|P63241-2|EIF5A	186.08907774512184	0.000684772772607045	6				NaN	NaN	0	NaN	7814	3324	11138
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11141	30.179	NaN	13237	30	0	3580.3	0.106	+			30960	QENSRVIVM	9	73	538.2818360710064	1074.5491192088127	2	538.282470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QENSRVIVM_	ENSG00000111679|ENST00000318974|PTPN6;ENSG00000179295|ENST00000351677|PTPN11;ENST00000416215.6_1_12:7061038-7070080:+|nuORF;ENST00000511359.1_1_5:23303923-23304922:-|nuORF;nc|ENSG00000111679|P29350-2|PTPN6;nc|ENSG00000111679|P29350-3|PTPN6;nc|ENSG00000111679|P29350-4|PTPN6;nc|ENSG00000179295|Q06124-1|PTPN11;nc|ENSG00000179295|Q06124-3|PTPN11	95.81516180277367	0.04847050768394289	6				NaN	NaN	0	NaN	7815	3324	11138
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11142	30.181	NaN	18141	30	0	4499.9	0.106	+			3343	ASMPVDIAK	9	74	466.24936188660536	930.4841708400107	2	466.24908447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASMPVDIAK_	ENSG00000108528|ENST00000225665|SLC25A11;ENST00000574710.1_1_17:4841038-4842521:-|nuORF;nc|ENSG00000108528|Q02978-2|SLC25A11	93.5975768576971	0.05472259948179787	6				NaN	NaN	0	NaN	7816	3324	11138
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11143	30.183	NaN	9222.4	30	0	2290.8	0.106	+			25274	LNQVAGLL	8	52	414.2529142091553	826.4912754851106	2	414.25274658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LNQVAGLL_	ENSG00000223496|ENST00000435634|EXOSC6	62.97842346883844	0.4722955155785405	6				NaN	NaN	0	NaN	7817	3324	11138
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11144	30.184	NaN	2386.5	30	0	529.45	0.036			+	-1	GSLACYIRE	9	46	356.84274253287805	1067.5063981988342	3	356.8427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_GSLAC(Carbamidomethyl (C))YIRE_	REV__ENSG00000240065|ENST00000374859|PSMB9;REV__ENST00000464863.1_1_6:32825046-32825190:+|nuORF;REV__ENST00000467593.1_1_6:32823908-32826344:+|nuORF;REV__nc|ENSG00000240065|P28065-2|PSMB9	19.996771675451527	0.6112419832031292	6				NaN	NaN	0	NaN	7818	3324	11138
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11145	30.185	NaN	4054.3	30	0	765.35	0.139	+			45405	TVVDCPVCK	9	74	482.23484610926175	962.4551392853235	2	482.2350158691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TVVDCPVCK_	ENSG00000130726|ENST00000253024|TRIM28	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	7819	3324	11138
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11163	30.224	NaN	236640	30	0	109410	0.184	+			40742	SVCVLDLRK	9	105	363.8741492997018	1088.6006184993055	3	363.874267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SVC(Carbamidomethyl (C))VLDLRK_	ENSG00000101849|ENST00000645353|TBL1X;ENSG00000177565|ENST00000457928|TBL1XR1;nc|ENSG00000101849|O60907-2|TBL1X;TBL1X|p.G568S|1|0.45|ENSG00000101849|chrX:9714998-9714998|G/A|missense_variant	58.2462437865262	0.22823408064396822	6				NaN	NaN	0	NaN	7834	3327	11162
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11164	30.227	NaN	30145	30	0	12872	0.106	+			31271	QHSSLCKTY	9	83	533.7527622737192	1065.4909716142383	2	533.7533569335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QHSSLCKTY_	ENSG00000174145|ENST00000309447|NWD2;NWD2|p.D1262Gfs*18|1|0.39|ENSG00000174145|chr4:37445769-37445770|-/G|frameshift_variant;NWD2|p.E713Rfs*7|1|0.36|ENSG00000174145|chr4:37444124-37444124|G/-|frameshift_variant;NWD2|p.K1317Nfs*43|1|0.35|ENSG00000174145|chr4:37445936-37445936|A/-|frameshift_variant;NWD2|p.W1259Gfs*22|4|0.26|ENSG00000174145|chr4:37445757-37445757|T/-|frameshift_variant	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	7835	3327	11162
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11165	30.229	NaN	5099.2	30	0	395.92	0.106	+			36866	SIFRTPISK	9	74	524.8112216251673	1047.6078903171344	2	524.8112182617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SIFRTPISK_	ASPM|p.I1717Nfs*24|1|0.43|ENSG00000066279|chr1:197104101-197104102|-/T|frameshift_variant;ASPM|p.I3229Nfs*2|1|0.48|ENSG00000066279|chr1:197090339-197090340|-/T|frameshift_variant;ASPM|p.K671Nfs*3|1|0.21|ENSG00000066279|chr1:197139780-197139780|T/-|frameshift_variant;ASPM|p.L1872Ffs*24|1|0.43|ENSG00000066279|chr1:197103635-197103636|-/A|frameshift_variant;ASPM|p.M2261*|1|0.44|ENSG00000066279|chr1:197102470-197102470|T/-|frameshift_variant;ASPM|p.N1062Rfs*28|1|0.1|ENSG00000066279|chr1:197124311-197124315|TAAGT/-|frameshift_variant;ASPM|p.N1680Kfs*11|1|0.33|ENSG00000066279|chr1:197104211-197104212|-/T|frameshift_variant;ASPM|p.Q2620Nfs*22|1|0.15|ENSG00000066279|chr1:197101393-197101394|-/TT|frameshift_variant;ASPM|p.Q2620Tfs*17|1|0.19|ENSG00000066279|chr1:197101393-197101394|-/T|frameshift_variant;ENSG00000066279|ENST00000367409|ASPM;nc|ENSG00000066279|Q8IZT6-2|ASPM	95.81516180277367	0.04847050768394289	6				NaN	NaN	0	NaN	7836	3327	11162
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11166	30.231	NaN	2835.9	30	0	1354.4	0.106				-1	 	0	41	336.2274099820645	670.440267030929	2	336.22735595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7837	3327	11162
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11167	30.232	NaN	3969.4	30	0	703.08	0.106	+			28664	NLRGGTNIIK	10	70	543.3247443301588	1084.6349357271174	2	543.3256225585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NLRGGTNIIK_	ENSG00000070770|ENST00000262506|CSNK2A2;ENST00000562367.1_1_16:58208309-58230657:-|nuORF	48.601550744091256	0.46988609897316763	6				NaN	NaN	0	NaN	7838	3327	11162
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11168	30.234	NaN	3150	30	0	413	0.106			+	25269	LNPVLCGAV	9	55	443.24536035840725	884.4761677836145	2	443.24566650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LNPVLCGAV_	REV__ENSG00000186912|ENST00000374519|P2RY4	31.954861631926434	0.5046124803899898	6				NaN	NaN	0	NaN	7839	3327	11162
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11169	30.236	NaN	4067	30	0	392	0.038				-1	YNMYKIKGK	9	60	387.54162110078903	NaN	0	387.54156494140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_YNM(Oxidation (M))YKIKGK_	tr|U7SQS0|U7SQS0_FUSNUIron(III)transportsystempermeaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01769PE=3SV=1	32.81241826257853	0.3119040447479903	6				NaN	NaN	0	NaN	7840	3327	11162
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11187	30.27	NaN	24678	30	0	4444.8	0.214	+			50562	YAVEGRDL	8	93	461.73507979003966	921.4556066468793	2	461.7348937988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YAVEGRDL_	ENSG00000163479|ENST00000295702|SSR2;ENST00000368311.5_1_1:155984733-155990735:-|nuORF;ENST00000472898.5_1_1:155981561-155990687:-|nuORF;ENST00000484320.6_1_1:155988041-155990687:-|nuORF;ENST00000532074.5_1_1:155984857-155990687:-|nuORF	93.19546047674547	0.2677966331495483	6				NaN	NaN	0	NaN	7855	3330	11186
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11188	30.274	NaN	7160.3	30	0	1023.9	0.106	+			48259	VTDGFSSLK	9	66	477.25079148838194	952.4870300435639	2	477.2503356933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTDGFSSLK_	ENSG00000110245|ENST00000227667|APOC3	85.16082228582465	0.07850854922700509	6				NaN	NaN	0	NaN	7856	3330	11186
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11189	30.276	NaN	7207.8	30	0	1478.4	0.106			+	47053	VLFSIKNG	8	69	439.26071890327273	876.5068848733455	2	439.26025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VLFSIKNG_	REV__ENST00000396908.8_2_19:36259471-36259852:+|nuORF	57.81127852772723	0.5234495074909924	6				NaN	NaN	0	NaN	7857	3330	11186
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11190	30.278	NaN	3266.8	30	0	385.02	0.106	+			11707	FRVLVSGA	8	62	424.75311127736074	847.4916696215215	2	424.7529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FRVLVSGA_	ENST00000533812.6_1_11:130716031-130716900:-|nuORF	57.81127852772723	0.5234495074909924	6				NaN	NaN	0	NaN	7858	3330	11186
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11191	30.28	NaN	10265	30	0	1971	0.106	+			18331	IPVEQKEGAF	10	74	559.2970378438389	1116.5795227544777	2	559.7982177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IPVEQKEGAF_	DDX21|p.I198Hfs*12|1|0.07|ENSG00000165732|chr10:68962140-68962141|-/ACATCACT|frameshift_variant;ENSG00000165732|ENST00000354185|DDX21;nc|ENSG00000165732|Q9NR30-2|DDX21	65.15724298150197	0.31893571707528906	6				NaN	NaN	0	NaN	7859	3330	11186
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11192	30.281	NaN	4080.7	30	0	586.98	0.034	+			6418	AVVQVALDK	9	60	471.784180520358	NaN	0	471.78448486328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AVVQVALDK_	ABCB1|p.N809Tfs*6|1|0.33|ENSG00000085563|chr7:87536513-87536513|T/-|frameshift_variant;ABCB1|p.P1016Lfs*2|1|0.23|ENSG00000085563|chr7:87516546-87516546|G/-|frameshift_variant;ENSG00000085563|ENST00000622132|ABCB1;nc|ENSG00000085563|P08183-2|ABCB1	44.377184641726394	0.24544280798894275	6				NaN	NaN	0	NaN	7860	3330	11186
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11193	30.282	NaN	3027.9	30	0	539.57	0.143			+	17897	IGEVEEGWLL	10	41	382.2012140553689	NaN	0	382.201416015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IGEVEEGWLL_	REV__ENSG00000164066|ENST00000335251|INTU;REV__INTU|p.F435Lfs*33|1|0.36|ENSG00000164066|chr4:127687717-127687717|T/-|frameshift_variant;REV__INTU|p.L591Cfs*2|2|0.18|ENSG00000164066|chr4:127705791-127705791|T/-|frameshift_variant;REV__INTU|p.M310Afs*29|1|0.08|ENSG00000164066|chr4:127663539-127663540|-/GCATTTTCAA|frameshift_variant;REV__INTU|p.M310Yfs*26|1|0.08|ENSG00000164066|chr4:127663538-127663539|-/A|frameshift_variant;REV__nc|ENSG00000164066|Q9ULD6-2|INTU;REV__nc|ENSG00000164066|Q9ULD6-3|INTU;REV__nc|ENSG00000164066|Q9ULD6-4|INTU	37.81151784470057	0.3760215235790741	6				NaN	NaN	0	NaN	7861	3330	11186
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11211	30.319	NaN	7425.5	30	0	1720	0.214	+			18332	IPVEQKEGAF	10	73	559.2970378438389	1116.5795227544777	2	559.7984008789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IPVEQKEGAF_	DDX21|p.I198Hfs*12|1|0.07|ENSG00000165732|chr10:68962140-68962141|-/ACATCACT|frameshift_variant;ENSG00000165732|ENST00000354185|DDX21;nc|ENSG00000165732|Q9NR30-2|DDX21	59.93077597824379	0.36646980200755325	6				NaN	NaN	0	NaN	7876	3333	11210
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11212	30.322	NaN	5752.8	30	0	1295.2	0.106	+			42246	TAAPPAQPL	9	54	433.2426209477224	864.4706889622448	2	433.2421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAAPPAQPL_	BRD2|p.G595Vfs*6|1|0.59|ENSG00000204256|chr6:32978327-32978327|G/-|frameshift_variant;ENSG00000204256|ENST00000374825|BRD2;nc|ENSG00000204256|P25440-2|BRD2;nc|ENSG00000204256|P25440-3|BRD2;nc|ENSG00000204256|P25440-4|BRD2	54.776311868738084	0.25715957988447635	6				NaN	NaN	0	NaN	7877	3333	11210
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11213	30.324	NaN	6477.7	30	0	1206.9	0.106	+			807	AEFTPAVHA	9	63	471.7377262493326	941.4608995654652	2	471.737060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEFTPAVHA_	ENSG00000188536|ENST00000251595|HBA2;ENSG00000206172|ENST00000320868|HBA1	55.50420428727701	0.2510918378945873	6				NaN	NaN	0	NaN	7878	3333	11210
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11214	30.326	NaN	7520.8	30	0	2257.8	0.106				-1	DGSRRFGYCRR	11	65	477.23411788561094	1428.6805242570329	3	477.56842041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_DGSRRFGYC(Carbamidomethyl (C))RR_	ENSG00000146966|ENST00000496613|DENND2A;ENSG00000166444|ENST00000313726|DENND2B;ENST00000526701.5_1_11:8724978-8732445:-|nuORF;nc|ENSG00000146966|Q9ULE3-2|DENND2A;nc|ENSG00000166444|P78524-2|DENND2B;nc|ENSG00000166444|P78524-3|DENND2B	35.17822180527639	0.6208003396870814	6				NaN	NaN	0	NaN	7879	3333	11210
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11215	30.328	NaN	2833.9	30	0	512.51	0.106	+			25344	LPEAGTTRTF	10	70	546.7876470093123	1091.5607410854245	2	546.7882080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LPEAGTTRTF_	ENSG00000138162|ENST00000369005|TACC2;nc|ENSG00000138162|O95359-3|TACC2;TACC2|p.E1974Rfs*22|1|0.37|ENSG00000138162|chr10:122195118-122195119|-/C|frameshift_variant;TACC2|p.V2229Cfs*22|1|0.07|ENSG00000138162|chr10:122211108-122211109|-/A|frameshift_variant	91.46909648831856	0.1226630089017797	6				NaN	NaN	0	NaN	7880	3333	11210
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11216	30.33	NaN	4774.9	30	0	737.91	0.037	+			18532	ISLKQAPLVH	10	54	369.2292422312062	1104.6658972938185	3	369.22882080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ISLKQAPLVH_	ENSG00000122705|ENST00000345519|CLTA;nc|ENSG00000122705|P09496-3|CLTA;nc|ENSG00000122705|P09496-4|CLTA;nc|ENSG00000122705|P09496-5|CLTA;nc|ENSG00000122705|P09496|CLTA	54.722347961057174	0.4138398245444204	6				NaN	NaN	0	NaN	7881	3333	11210
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11217	30.33	NaN	1526.6	30	0	181.83	0.141	+			18533	ISLKQAPLVH	10	55	553.3399734657379	1104.6653939982757	2	553.3401489257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ISLKQAPLVH_	ENSG00000122705|ENST00000345519|CLTA;nc|ENSG00000122705|P09496-3|CLTA;nc|ENSG00000122705|P09496-4|CLTA;nc|ENSG00000122705|P09496-5|CLTA;nc|ENSG00000122705|P09496|CLTA	84.81729255234993	0.1607459278640679	6				NaN	NaN	0	NaN	7882	3333	11210
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11235	30.37	NaN	10054	30	0	2462.5	0.214	+			37060	SISAVVMEK	9	67	482.2626709258424	962.5107889184848	2	482.26251220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SISAVVMEK_	ENSG00000138688|ENST00000679879|BLTP1;KIAA1109-FSIP2|1|fusion;nc|ENSG00000138688|Q2LD37-2|BLTP1;nc|ENSG00000138688|Q2LD37-4|BLTP1;nc|ENSG00000138688|Q2LD37-6|BLTP1;nc|ENSG00000138688|Q2LD37-7|BLTP1;nc|ENSG00000138688|Q2LD37|BLTP1	106.68306549817024	0.032382560583716295	6				NaN	NaN	0	NaN	7897	3336	11234
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11236	30.373	NaN	5479.1	30	0	1319.3	0.106	+			18864	IVFVTGNAK	9	66	474.7795602028363	947.5445674724726	2	474.7791442871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IVFVTGNAK_	ENSG00000125877|ENST00000380113|ITPA;ENST00000460550.5_1_20:3190197-3194650:+|nuORF;nc|ENSG00000125877|Q9BY32-3|ITPA	52.936696900407355	0.27249468807391813	6				NaN	NaN	0	NaN	7898	3336	11234
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11237	30.375	NaN	4837	30	0	364.51	0.106	+			36238	SEMKLSVNA	9	65	489.74992931884543	977.4853057044909	2	489.7497863769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEMKLSVNA_	ENSG00000241553|ENST00000397261|ARPC4;ENST00000440787.5_1_3:9845376-9847896:+|nuORF;ENST00000467289.5_1_3:9834805-9845712:+|nuORF;nc|ENSG00000241553|P59998-3|ARPC4;nc|ENSG00000241553|P59998-4|ARPC4	83.6470233535746	0.08277643980271215	6				NaN	NaN	0	NaN	7899	3336	11234
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11238	30.377	NaN	3429	30	0	689.46	0.106			+	24417	LGAPLQLK	8	54	420.27134074078134	838.5281285483627	2	420.2711181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LGAPLQLK_	REV__ENSG00000148468|ENST00000378116|FAM171A1	44.53106598305862	0.628196326904373	6				NaN	NaN	0	NaN	7900	3336	11234
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11239	30.379	NaN	2861.2	30	0	384.35	0.106	+			48100	VSTLLSLGK	9	66	459.28605897881425	916.5575650244285	2	459.2862243652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSTLLSLGK_	ENSG00000162460|ENST00000375782|TMEM82	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	7901	3336	11234
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11240	30.381	NaN	2407.1	30	0	586.78	0.033	+			39246	STALALVGK	9	51	430.26612447991437	858.5176960266288	2	430.26593017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STALALVGK_	ABCA13|p.K4864Q|1|0.31|ENSG00000179869|chr7:48587238-48587238|A/C|missense_variant;ENSG00000179869|ENST00000435803|ABCA13;nc|ENSG00000179869|Q86UQ4-3|ABCA13;nc|ENSG00000179869|Q86UQ4-4|ABCA13;nc|ENSG00000179869|Q86UQ4-5|ABCA13;nc|ENSG00000179869|Q86UQ4-6|ABCA13;nc|ENSG00000179869|Q86UQ4-7|ABCA13;nc|ENSG00000179869|Q86UQ4|ABCA13	44.116797842482775	0.37197099687881774	6				NaN	NaN	0	NaN	7902	3336	11234
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11241	30.381	NaN	2339.9	30	0	276.07	0.14			+	19735	KDVCLNLK	8	59	495.27597398111817	988.5373950290364	2	495.2757873535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_KDVC(Carbamidomethyl (C))LNLK_	REV__ENSG00000138434|ENST00000431877|ITPRID2;REV__ENST00000440623.5_1_2:182756982-182781157:+|nuORF;REV__nc|ENSG00000138434|P28290-2|ITPRID2;REV__nc|ENSG00000138434|P28290-3|ITPRID2	54.776311868738084	0.5534952410049249	6				NaN	NaN	0	NaN	7903	3336	11234
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11259	30.418	NaN	10930	30	0	3373.6	0.214	+			40542	SVAALPVCK	9	70	444.2543688734861	886.4941848137722	2	444.25482177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVAALPVCK_	ENSG00000007255|ENST00000585934|TRAPPC6A;nc|ENSG00000007255|O75865-2|TRAPPC6A	58.78195531508484	0.22376836668196862	6				NaN	NaN	0	NaN	7918	3339	11258
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11260	30.422	NaN	3745.7	30	0	1139.5	0.106	+			18838	IVAGTIVVK	9	51	450.30018611814273	898.5858193030855	2	450.3002014160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IVAGTIVVK_	ENSG00000137414|ENST00000259963|FAM8A1	56.72105179125745	0.24094814563026265	6				NaN	NaN	0	NaN	7919	3339	11258
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11261	30.424	NaN	15636	30	0	6475.9	0.106	+			18937	IVNDFAYMKK	10	71	410.2182986784587	1227.6330666355761	3	410.5527038574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IVNDFAYMKK_	ENSG00000170348|ENST00000303575|TMED10;ENST00000534816.1_1_8:146220430-146220868:+|nuORF;ENST00000555036.1_1_14:75602424-75614456:-|nuORF;ENST00000555873.1_1_14:75601590-75605782:-|nuORF;ENST00000556969.5_1_14:75601590-75614465:-|nuORF	60.1669710687717	0.3643216362415131	6				NaN	NaN	0	NaN	7920	3339	11258
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11262	30.426	NaN	5117.5	30	0	894.03	0.106	+			43919	TPAERGLVY	9	66	503.2711092351776	1004.5276655371553	2	503.77154541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TPAERGLVY_	ENST00000357085.4_2_6:25963311-25963422:+|nuORF	65.46538089061403	0.16805504838372562	6				NaN	NaN	0	NaN	7921	3339	11258
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11263	30.428	NaN	3394.9	30	0	477.66	0.106			+	33556	RLFRSSIG	8	58	468.27462657130116	934.5347002094023	2	468.2747802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RLFRSSIG_	REV__ENST00000467838.2_1_9:139335515-139335683:-|nuORF	31.954861631926434	0.7126016770032289	6				NaN	NaN	0	NaN	7922	3339	11258
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11264	30.429	NaN	1501.1	30	0	81.211	0.037	+			21901	KRSEFGAPIK	10	60	566.8280704131494	1131.6415878930986	2	566.8282470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KRSEFGAPIK_	ENSG00000162643|ENST00000294664|DNAI3;nc|ENSG00000162643|Q8IWG1-2|DNAI3	43.650786325866115	0.5155049133366767	6				NaN	NaN	0	NaN	7923	3339	11258
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11265	30.43	NaN	1565.2	30	0	128.44	0.141			+	-1	REVCFGWF	8	66	550.7548075994969	1099.4950622657936	2	550.7562866210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_REVC(Carbamidomethyl (C))FGWF_	REV__ENST00000399788.6_1_12:498336-498612:-|nuORF	35.61828744233558	0.6843154725607303	6				NaN	NaN	0	NaN	7924	3339	11258
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11283	30.467	NaN	17244	30	0	4943.5	0.214	+			23378	LAADCAHEL	9	75	471.72116732888776	941.4277817245755	2	471.7210998535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LAADCAHEL_	ENSG00000157379|ENST00000288111|DHRS1;ENST00000558340.1_1_14:24760067-24761569:-|nuORF;ENST00000561137.5_1_14:24760413-24761527:-|nuORF;ENST00000561273.5_1_14:24760714-24761569:-|nuORF	124.59426212874841	0.018418509520798258	6				NaN	NaN	0	NaN	7939	3342	11282
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11284	30.471	NaN	246300	30	0	70852	0.106	+			7609	DKDLENILRK	10	104	415.23826931774556	1242.6929785534367	3	415.2383728027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DKDLENILRK_	tr|U7SYT2|U7SYT2_FUSNURibosomalRNAsmallsubunitmethyltransferaseAOS=FusobacteriumnucleatumCTI-5OX=1316586GN=rsmAPE=3SV=1	48.601550744091256	0.46988609897316763	6				NaN	NaN	0	NaN	7940	3342	11282
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11285	30.473	NaN	28029	30	0	11388	0.106	+			18835	IVAGSLITK	9	70	451.2894844679207	900.5644160026415	2	451.2895202636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IVAGSLITK_	ENSG00000196504|ENST00000545856|PRPF40A;nc|ENSG00000196504|O75400-2|PRPF40A;nc|ENSG00000196504|O75400|PRPF40A;PRPF40A|p.K411Sfs*40|2|0.19|ENSG00000196504|chr2:152672597-152672597|T/-|frameshift_variant;PRPF40A|p.Q412Afs*4|1|0.16|ENSG00000196504|chr2:152672596-152672597|-/T|frameshift_variant	109.47833844074708	0.029530294723441826	6				NaN	NaN	0	NaN	7941	3342	11282
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11286	30.475	NaN	37250	30	0	16928	0.106	+			41979	SVYDHQGIFK	10	64	398.5368540552913	1192.588732766074	3	398.53656005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVYDHQGIFK_	ENSG00000153989|ENST00000368494|NUS1;NUS1|p.R143I|2|0.23|ENSG00000153989|chr6:117693054-117693054|G/T|missense_variant	49.536043120802724	0.461275219792494	6				NaN	NaN	0	NaN	7942	3342	11282
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11287	30.477	NaN	10819	30	0	1671.9	0.106	+			40560	SVAECQLMK	9	76	504.7479085968103	1007.4812642604206	2	504.747314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVAECQLMK_	ENSG00000105221|ENST00000392038|AKT2;ENST00000391844.8_1_19:40739781-40791100:-|nuORF;ENST00000537834.5_1_19:40745726-40771198:-|nuORF;nc|ENSG00000105221|P31751-2|AKT2	69.6276240434122	0.14239879520340665	6				NaN	NaN	0	NaN	7943	3342	11282
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11288	30.478	NaN	9516.1	30	0	2542.9	0.106	+			32918	RDVPVVRL	8	85	477.29722015508315	NaN	0	477.29815673828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RDVPVVRL_	ENSG00000151348|ENST00000533608|EXT2;EXT2|p.D82Ifs*30|1|0.43|ENSG00000151348|chr11:44107951-44107951|G/-|frameshift_variant;EXT2|p.N517Tfs*3|1|0.49|ENSG00000151348|chr11:44206844-44206844|A/-|frameshift_variant;nc|ENSG00000151348|Q93063-2|EXT2;nc|ENSG00000151348|Q93063-3|EXT2	66.42927471994793	1.7418937515398478	6				NaN	NaN	0	NaN	7944	3342	11282
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11289	30.48	NaN	3902.5	30	0	475.82	0.034			+	11084	FEVLIALY	8	59	484.27667236328125	NaN	0	484.27667236328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FEVLIALY_	REV__ENST00000489338.6_1_6:88125312-88173965:+|nuORF	39.021493756699265	1.7418937515398478	6				NaN	NaN	0	NaN	7945	3342	11282
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11307	30.515	NaN	48478	30	0	6193.7	0.214	+			1545	AGDGLIELRK	10	81	536.3114188564133	1070.6082847796265	2	536.3118896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AGDGLIELRK_	ENSG00000167085|ENST00000300408|PHB1	143.37361013837676	0.009854612225601756	6				NaN	NaN	0	NaN	7960	3345	11306
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11308	30.518	NaN	29217	30	0	8686.2	0.039	+			31850	QPTIQIELRQ	10	92	409.2349412141334	1224.6829942426002	3	409.2339782714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QPTIQIELRQ_	ENSG00000184292|ENST00000371225|TACSTD2	48.18798116849167	0.47369693546262365	6				NaN	NaN	0	NaN	7961	3345	11306
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11326	30.554	NaN	27922	30	0	7591.9	0.214	+			4807	ATNSSMFLK	9	72	499.752249023581	NaN	0	499.7520751953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATNSSMFLK_	COG5|p.K795Rfs*18|1|0.42|ENSG00000164597|chr7:107210547-107210547|T/-|frameshift_variant;ENSG00000164597|ENST00000297135|COG5;nc|ENSG00000164597|Q9UP83-1|COG5;nc|ENSG00000164597|Q9UP83-3|COG5;nc|ENSG00000164597|Q9UP83|COG5	204.4243087208965	7.786135070191224E-06	6				NaN	NaN	0	NaN	7976	3348	11325
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11327	30.558	NaN	39374	30	0	3844.5	0.106	+			2513	APVEVTHNF	9	100	507.2561377592371	1012.4977225852742	2	507.25604248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_APVEVTHNF_	ENSG00000005007|ENST00000262803|UPF1;nc|ENSG00000005007|Q92900|UPF1	171.53180478179638	0.0025054460641941692	6				NaN	NaN	0	NaN	7977	3348	11325
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11328	30.56	NaN	5902	30	0	517	0.106	+			30741	QDLKTELLQR	10	74	622.3537655139739	NaN	0	622.352783203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QDLKTELLQR_	EEA1|p.K257Nfs*13|2|0.34|ENSG00000102189|chr12:92851138-92851138|T/-|frameshift_variant;EEA1|p.N1389Mfs*3|1|0.33|ENSG00000102189|chr12:92776081-92776081|T/-|frameshift_variant;ENSG00000102189|ENST00000322349|EEA1	66.9202029811203	0.17776675719981952	6				NaN	NaN	0	NaN	7978	3348	11325
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11329	30.562	NaN	11684	30	0	1115.8	0.106	+			42328	TAGDGLIELRK	11	77	586.8355001020877	1171.6564472709754	2	586.8355712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TAGDGLIELRK_	ENSG00000167085|ENST00000300408|PHB1	159.33581866081465	5.4966198810242E-05	6				NaN	NaN	0	NaN	7979	3348	11325
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11330	30.563	NaN	4896.5	30	0	769.93	0.106	+			14517	GTDEPIFGK	9	66	482.24092641676555	NaN	0	482.23468017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTDEPIFGK_	ENSG00000039123|ENST00000230640|MTREX;ENST00000503165.5_1_5:54603841-54625205:+|nuORF;ENST00000504388.5_1_5:54603829-54620403:+|nuORF	62.107414245175825	0.1403307765918332	6				NaN	NaN	0	NaN	7980	3348	11325
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11331	30.565	NaN	8092.3	30	0	2527.6	0.034	+			26706	LVIDSAVEK	9	71	487.283024001753	972.551495070306	2	487.2819519042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LVIDSAVEK_	ENSG00000131584|ENST00000354700|ACAP3;ENST00000472541.5_1_1:1235057-1244982:-|nuORF;nc|ENSG00000131584|Q96P50-1|ACAP3	78.26377905018397	0.10505600812668463	6				NaN	NaN	0	NaN	7981	3348	11325
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11332	30.566	NaN	8366.6	30	0	2557.3	0.141	+			30951	QENDRVVMV	9	76	545.2713530448756	1088.528153156551	2	545.2724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QENDRVVMV_	ENSG00000119139|ENST00000377245|TJP2;ENST00000377259.5_2_9:71766567-71833305:+|nuORF;nc|ENSG00000119139|Q9UDY2-2|TJP2;nc|ENSG00000119139|Q9UDY2-3|TJP2;nc|ENSG00000119139|Q9UDY2-4|TJP2;nc|ENSG00000119139|Q9UDY2-5|TJP2;nc|ENSG00000119139|Q9UDY2-6|TJP2;nc|ENSG00000119139|Q9UDY2-7|TJP2;TJP2|p.F813Sfs*12|1|0.23|ENSG00000119139|chr9:69240013-69240013|T/-|frameshift_variant;TJP2|p.L79I|1|0.16|ENSG00000119139|chr9:69216459-69216459|C/A|missense_variant;TJP2|p.P484Qfs*30|1|0.18|ENSG00000119139|chr9:69228107-69228107|C/-|frameshift_variant;TJP2|p.R179Vfs*132|1|0.16|ENSG00000119139|chr9:69221074-69221074|G/-|frameshift_variant;TJP2|p.T849Rfs*12|1|0.32|ENSG00000119139|chr9:69240120-69240120|A/-|frameshift_variant	75.04331003522576	0.118981335847003	6				NaN	NaN	0	NaN	7982	3348	11325
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11350	30.605	NaN	15116	30	0	3568.1	0.214			+	9598	ELLESRSL	8	81	473.7638646442669	945.5131763553338	2	473.7634582519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ELLESRSL_	REV__ENST00000361112.6_1_17:33849919-33864693:-|nuORF	74.25504064058377	0.37144338840759816	6				NaN	NaN	0	NaN	7997	3351	11349
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11351	30.609	NaN	7800.9	30	0	1800.8	0.106			+	-1	SLIAMLVVVM	10	57	364.54484588399896	1090.6127082521969	3	364.5447998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_SLIAM(Oxidation (M))LVVVM_	REV__ENSG00000145495|ENST00000274140|MARCHF6;REV__nc|ENSG00000145495|O60337-5|MARCHF6;REV__nc|ENSG00000145495|O60337-6|MARCHF6	29.170058357718403	0.6416167986984785	6				NaN	NaN	0	NaN	7998	3351	11349
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11352	30.611	NaN	7179.1	30	0	2045.8	0.106	+			49603	VYGKVDSF	8	64	457.734298714968	913.4540444967361	2	457.7342224121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYGKVDSF_	ENSG00000152127|ENST00000281923|MGAT5	66.42927471994793	0.4381325844043345	6				NaN	NaN	0	NaN	7999	3351	11349
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11353	30.613	NaN	3811.8	30	0	401.04	0.106	+			14518	GTDEPIFGK	9	71	482.24092641676555	NaN	0	482.2415771484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTDEPIFGK_	ENSG00000039123|ENST00000230640|MTREX;ENST00000503165.5_1_5:54603841-54625205:+|nuORF;ENST00000504388.5_1_5:54603829-54620403:+|nuORF	60.11826168202944	0.14881452885248947	6				NaN	NaN	0	NaN	8000	3351	11349
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11354	30.614	NaN	3478.5	30	0	302.66	0.106	+			16354	HELVIKTL	8	65	476.79464026904657	NaN	0	476.79443359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HELVIKTL_	ENSG00000141452|ENST00000269221|RMC1;ENST00000589215.5_1_18:21087981-21111645:+|nuORF;ENST00000589409.1_1_18:21109949-21110297:+|nuORF;ENST00000591367.5_1_18:21109371-21111665:+|nuORF	56.72105179125745	1.7418937515398478	6				NaN	NaN	0	NaN	8001	3351	11349
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11355	30.616	NaN	7771.1	30	0	2974.3	0.037			+	6706	AYVTKKHYT	9	43	370.87060015465454	1109.5899710641636	3	370.8694152832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AYVTKKHYT_	REV__GEMIN5|p.T475A|1|0.11|ENSG00000082516|chr5:154921382-154921382|T/C|missense_variant	29.14955571784316	0.5308295550522326	6				NaN	NaN	0	NaN	8002	3351	11349
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11356	30.617	NaN	2087	30	0	183.99	0.14	+			15277	GTTSQDSALR	10	63	518.2582923068306	1034.5020316804612	2	518.258056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GTTSQDSALR_	PPP4R1|p.L448Rfs*6|1|0.28|ENSG00000154845|chr18:9570387-9570388|AA/-|frameshift_variant	38.753607047826485	0.5606299674732264	6				NaN	NaN	0	NaN	8003	3351	11349
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11375	30.656	NaN	55412	30	0	7334.1	0.214	+			16016	HASDRIIAL	9	97	498.28559469790974	994.5566364626195	2	498.2854309082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HASDRIIAL_	ENSG00000163931|ENST00000462138|TKT;ENST00000460343.5_1_3:53261754-53265639:-|nuORF;ENST00000461139.5_1_3:53259774-53265639:-|nuORF;ENST00000469678.1_1_3:53259917-53265542:-|nuORF;nc|ENSG00000163931|P29401-2|TKT	70.8162118820467	0.13725933411854815	6				NaN	NaN	0	NaN	8019	3354	11374
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11376	30.66	NaN	2149.6	30	0	875.18	0.106			+	25444	LPPPATEALDT	11	54	562.7959628181827	1123.5773727031653	2	562.79638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LPPPATEALDT_	REV__ENSG00000151136|ENST00000280758|ABTB3;REV__nc|ENSG00000151136|A6QL63-3|ABTB3;REV__nc|ENSG00000151136|A6QL63-5|ABTB3	47.657333605630114	0.4531673460382624	6				NaN	NaN	0	NaN	8020	3354	11374
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11377	30.662	NaN	4249.1	30	0	404.67	0.106			+	10896	FCVWAQPPC	9	75	525.7320114100055	1049.449469886811	2	525.7335815429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FCVWAQPPC_	REV__ENST00000222990.7_1_7:2293201-2294050:-|nuORF	40.5726180659479	0.4135428067754104	6				NaN	NaN	0	NaN	8021	3354	11374
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11378	30.664	NaN	2213.2	30	0	259.88	0.106			+	16559	HFANIGTLS	9	53	480.25301701892454	958.4914811046491	2	480.2523193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HFANIGTLS_	REV__nc|ENSG00000072756|Q96Q11-3|TRNT1	34.172542307311794	0.4838870758800184	6				NaN	NaN	0	NaN	8022	3354	11374
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11379	30.665	NaN	4006.6	30	0	942.85	0.106	+			45115	TVIVAVFVLLA	11	42	382.2484227565137	1143.7234388697411	3	382.2484436035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TVIVAVFVLLA_	ENSG00000283288|ENST00000637503|SMIM33	38.753607047826485	0.5749975102143227	6				NaN	NaN	0	NaN	8023	3354	11374
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11380	30.667	NaN	1244.3	30	0	186.42	0.037			+	48610	VTSAEIQVTR	10	46	368.539166370088	NaN	0	368.5392761230469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTSAEIQVTR_	REV__ENSG00000168385|ENST00000391971|SEPTIN2;REV__ENST00000366210.2_1_2:242263647-242276275:+|nuORF;REV__ENST00000467971.5_1_2:242255375-242276932:+|nuORF;REV__ENST00000473479.5_1_2:242274588-242275589:+|nuORF;REV__nc|ENSG00000168385|Q15019-2|SEPTIN2;REV__nc|ENSG00000168385|Q15019-3|SEPTIN2	36.446750945000026	0.3805027428805705	6				NaN	NaN	0	NaN	8024	3354	11374
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11381	30.668	NaN	1949.7	30	0	124.35	0.14	+			33464	RIQLPVVSK	9	59	520.334911717075	1038.6552705009499	2	520.8367309570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RIQLPVVSK_	chr10:128113602-128116491|398|11.56|0.71|4.03|-|ENST00000368653|MKI67,MKI67;ENSG00000148773|ENST00000368654|MKI67;MKI67|p.K319Rfs*27|1|0.35|ENSG00000148773|chr10:128115454-128115454|C/-|frameshift_variant;MKI67|p.L2374*|1|0.28|ENSG00000148773|chr10:128104719-128104719|A/-|frameshift_variant;MKI67|p.L783Hfs*49|1|0.05|ENSG00000148773|chr10:128110447-128110448|-/TG|frameshift_variant;MKI67|p.L783Yfs*49|1|0.05|ENSG00000148773|chr10:128110446-128110447|-/GT|frameshift_variant;MKI67|p.R3036Yfs*27|1|0.04|ENSG00000148773|chr10:128102735-128102736|-/AAAATAA|frameshift_variant;MKI67|p.T672Nfs*4|1|0.25|ENSG00000148773|chr10:128112000-128112001|-/T|frameshift_variant;nc|ENSG00000148773|P46013-2|MKI67	38.753607047826485	0.4348790777924195	6				NaN	NaN	0	NaN	8025	3354	11374
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11399	30.707	NaN	34498	30	0	18088	0.214			+	45839	VAKQPKDVI	9	95	499.305912568222	996.5972722032441	2	499.305419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VAKQPKDVI_	REV__ENSG00000164398|ENST00000651883|ACSL6;REV__nc|ENSG00000164398|Q9UKU0-2|ACSL6;REV__nc|ENSG00000164398|Q9UKU0-3|ACSL6;REV__nc|ENSG00000164398|Q9UKU0-5|ACSL6;REV__nc|ENSG00000164398|Q9UKU0-6|ACSL6;REV__nc|ENSG00000164398|Q9UKU0-7|ACSL6;REV__nc|ENSG00000164398|Q9UKU0-8|ACSL6;REV__nc|ENSG00000164398|Q9UKU0-9|ACSL6;REV__nc|ENSG00000164398|Q9UKU0|ACSL6	42.86426827375447	0.38666266728046506	6				NaN	NaN	0	NaN	8040	3357	11398
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11400	30.711	NaN	9506.5	30	0	1691.5	0.106	+			4063	ATDIVTGLK	9	69	459.2688233974861	916.5230938617722	2	459.2685241699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATDIVTGLK_	ENSG00000007952|ENST00000372966|NOX1;nc|ENSG00000007952|Q9Y5S8-3|NOX1	129.42129120953632	0.01549634589885217	6				NaN	NaN	0	NaN	8041	3357	11398
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11401	30.713	NaN	9267.6	30	0	1498.5	0.106	+			25544	LPVDKAQEL	9	80	506.78730442081365	1011.5600559084273	2	506.78692626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LPVDKAQEL_	ENSG00000196497|ENST00000354464|IPO4;ENST00000558780.5_2_14:24649650-24651621:-|nuORF;nc|ENSG00000196497|Q8TEX9-2|IPO4	42.86426827375447	0.38666266728046506	6				NaN	NaN	0	NaN	8042	3357	11398
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11402	30.715	NaN	18000	30	0	8123	0.106	+			27117	MAPERVASL	9	68	487.260483838171	972.506414743142	2	487.2601318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MAPERVASL_	ENSG00000158169|ENST00000289081|FANCC;FANCC|p.V449Cfs*22|1|0.07|ENSG00000158169|chr9:95107254-95107254|C/-|frameshift_variant	61.691277971877994	0.19951612995419254	6				NaN	NaN	0	NaN	8043	3357	11398
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11403	30.717	NaN	15950	30	0	2200.8	0.106	+			48309	VTEKVLAAVYK	11	84	407.58002537750656	1219.7182467327198	3	407.5797119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTEKVLAAVYK_	ENSG00000109107|ENST00000226253|ALDOC;ENSG00000136872|ENST00000647789|ALDOB;ENSG00000149925|ENST00000642816|ALDOA;nc|ENSG00000149925|P04075|ALDOA	80.73710961997651	0.14622783403345802	6				NaN	NaN	0	NaN	8044	3357	11398
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11404	30.718	NaN	3818.7	30	0	525.42	0.034	+			17731	IENTSHLL	8	63	463.75060001474736	925.4866470962947	2	463.75030517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IENTSHLL_	ENSG00000054654|ENST00000555002|SYNE2;ENST00000394768.6_2_14:64542710-64692241:+|nuORF;ENST00000557060.1_1_14:64540716-64565614:+|nuORF;nc|ENSG00000054654|Q8WXH0-7|SYNE2;nc|ENSG00000054654|Q8WXH0|SYNE2;SYNE2|p.A5240Qfs*5|1|0.07|ENSG00000054654|chr14:64152639-64152639|G/-|frameshift_variant;SYNE2|p.F4992Lfs*13|1|0.39|ENSG00000054654|chr14:64140067-64140067|T/-|frameshift_variant;SYNE2|p.L5308Ifs*18|1|0.12|ENSG00000054654|chr14:64158750-64158751|GG/-|frameshift_variant;SYNE2|p.S6651Rfs*83|1|0.29|ENSG00000054654|chr14:64220596-64220597|-/G|frameshift_variant	104.74654710444128	0.24806011021879068	6				NaN	NaN	0	NaN	8045	3357	11398
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11405	30.719	NaN	2422.9	30	0	258.71	0.137	+			18351	IQLLGGVS	8	57	393.73981105651626	785.4650691798325	2	393.73956298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IQLLGGVS_	ENST00000352410.8_1_15:75190564-75190915:+|nuORF	47.91560031466742	0.6071945918984287	6				NaN	NaN	0	NaN	8046	3357	11398
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11423	30.757	NaN	10839	30	0	2482.5	0.214	+			34890	SAAAALVLK	9	71	422.26859240055563	842.5226318679113	2	422.2684326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAAAALVLK_	ENSG00000137076|ENST00000314888|TLN1;nc|ENSG00000137076|Q9Y490-2|TLN1;TLN1|p.P1628Rfs*20|1|0.44|ENSG00000137076|chr9:35707144-35707144|G/-|frameshift_variant	131.03138772384656	0.014687601201650916	6				NaN	NaN	0	NaN	8061	3360	11422
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11424	30.76	NaN	3580.3	30	0	383.36	0.106	+			2312	AMIENFNAK	9	70	519.257937170366	1036.5013214075318	2	519.2578735351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AMIENFNAK_	ENSG00000102030|ENST00000464845|NAA10;ENSG00000156269|ENST00000286794|NAA11;ENST00000466877.5_1_X:153197755-153200402:-|nuORF;ENST00000477882.1_1_X:153197755-153198123:-|nuORF;ENST00000494813.5_1_X:153187159-153200402:-|nuORF;nc|ENSG00000102030|P41227-2|NAA10	56.43379154798735	0.2433427591689151	6				NaN	NaN	0	NaN	8062	3360	11422
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11425	30.762	NaN	1675.8	30	0	286.09	0.106	+			34877	RYTTEFHEL	9	49	598.2908643492821	1194.567175765364	2	598.2911376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RYTTEFHEL_	ENSG00000166483|ENST00000450114|WEE1;ENST00000524549.1_1_11:9597437-9598815:+|nuORF;nc|ENSG00000166483|P30291-2|WEE1	31.529811441608018	0.5085848003137583	6				NaN	NaN	0	NaN	8063	3360	11422
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11426	30.764	NaN	2806.1	30	0	254.68	0.106	+			36454	SEVKVTEL	8	59	452.75277903132996	NaN	0	452.7525634765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SEVKVTEL_	ENSG00000100979|ENST00000372431|PLTP;nc|ENSG00000100979|P55058-2|PLTP	69.6276240434122	1.7418937515398478	6				NaN	NaN	0	NaN	8064	3360	11422
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11427	30.766	NaN	1944.4	30	0	184.17	0.106	+			50261	WQKDSYIA	8	66	505.7520819002897	1009.4896108673794	2	505.75299072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_WQKDSYIA_	PTPRA|p.R598W|1|0.3|ENSG00000132670|chr20:3027713-3027713|C/T|missense_variant	26.79610172149135	0.7524337208463756	6				NaN	NaN	0	NaN	8065	3360	11422
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11428	30.768	NaN	6282.6	30	0	2205.9	0.034	+			30467	QAEATAQTL	9	60	466.73797565913407	931.4613983850682	2	466.7372131347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QAEATAQTL_	ENSG00000164694|ENST00000297267|FNDC1;FNDC1|p.R809Q|1|0.5|ENSG00000164694|chr6:159232938-159232938|G/A|missense_variant;FNDC1|p.T1443Nfs*81|2|0.16|ENSG00000164694|chr6:159239656-159239657|-/A|frameshift_variant;FNDC1|p.T1443Pfs*84|1|0.31|ENSG00000164694|chr6:159239657-159239657|A/-|frameshift_variant;nc|ENSG00000164694|Q4ZHG4-2|FNDC1	70.8162118820467	0.13725933411854815	6				NaN	NaN	0	NaN	8066	3360	11422
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11429	30.768	NaN	3623	30	0	429.78	0.138			+	25361	LPGAGVVTAL	10	65	449.27392387565834	896.5332948181167	2	449.27386474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LPGAGVVTAL_	REV__ENSG00000162104|ENST00000294016|ADCY9	63.30626980617807	0.33577009411590547	6				NaN	NaN	0	NaN	8067	3360	11422
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11447	30.808	NaN	90382	30	0	48847	0.214	+			31339	QISEVVVVK	9	93	500.80603836576284	999.5975237983257	2	500.80535888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QISEVVVVK_	ENSG00000099622|ENST00000587896|CIRBP;nc|ENSG00000099622|Q14011-2|CIRBP;nc|ENSG00000099622|Q14011|CIRBP	138.06239232086	0.011389075116295402	6				NaN	NaN	0	NaN	8082	3363	11446
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11448	30.811	NaN	3990.4	30	0	572.25	0.106	+			17325	IAGSPNWTP	9	65	471.73790033971835	941.4612477462367	2	471.7374267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IAGSPNWTP_	ENST00000604104.1_1_9:98268979-98269411:+|nuORF	58.78195531508484	0.22376836668196862	6				NaN	NaN	0	NaN	8083	3363	11446
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11449	30.813	NaN	2104.4	30	0	185.36	0.106	+			48394	VTIEGTSAVYK	11	64	584.3164367551399	1166.6183205770797	2	584.31640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTIEGTSAVYK_	ENSG00000125686|ENST00000300651|MED1;MED1|p.G570Vfs*9|1|0.06|ENSG00000125686|chr17:39410512-39410512|C/-|frameshift_variant;MED1|p.G814Afs*8|1|0.1|ENSG00000125686|chr17:39409779-39409780|CC/-|frameshift_variant;MED1|p.Q744Sfs*36|1|0.7|ENSG00000125686|chr17:39409991-39409991|G/-|frameshift_variant;MED1|p.S1294Yfs*16|1|0.06|ENSG00000125686|chr17:39408340-39408341|-/T|frameshift_variant;MED1|p.S616Lfs*31|1|0.21|ENSG00000125686|chr17:39410376-39410376|C/-|frameshift_variant;nc|ENSG00000125686|Q15648-3|MED1	100.81924332030881	0.058993442163212936	6				NaN	NaN	0	NaN	8084	3363	11446
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11450	30.815	NaN	5466.9	30	0	1076.5	0.106	+			44412	TSLPSAICK	9	58	460.24947317555956	NaN	0	460.2493591308594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TSLPSAICK_	ENSG00000177731|ENST00000327031|FLII;ENST00000578101.5_1_17:18148454-18160363:-|nuORF;FLII|p.K628Rfs*27|1|0.37|ENSG00000177731|chr17:18249178-18249178|T/-|frameshift_variant;FLII|p.S470Afs*32|1|0.36|ENSG00000177731|chr17:18251454-18251454|G/-|frameshift_variant;nc|ENSG00000177731|Q13045-2|FLII;nc|ENSG00000177731|Q13045-3|FLII	42.86426827375447	0.2558691296974908	6				NaN	NaN	0	NaN	8085	3363	11446
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11451	30.817	NaN	3643.8	30	0	643.09	0.106				-1	TLDAKSMLK	9	61	511.77923778452595	1021.5439226358519	2	511.77972412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_TLDAKSM(Oxidation (M))LK_	ENSG00000138696|ENST00000515059|BMPR1B;nc|ENSG00000138696|O00238-2|BMPR1B	51.19269402634007	0.2889735674168909	6				NaN	NaN	0	NaN	8086	3363	11446
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11452	30.819	NaN	2447.9	30	0	644.41	0.036				-1	GSCSDFQFK	9	58	538.2295326782213	1074.4445124232425	2	538.2298583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_GSC(Carbamidomethyl (C))SDFQFK_	ENSG00000124429|ENST00000262753|POF1B;nc|ENSG00000124429|Q8WVV4-1|POF1B	30.317721548370564	0.5199124245378496	6				NaN	NaN	0	NaN	8087	3363	11446
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11453	30.819	NaN	1356.9	30	0	138.7	0.139			+	12094	GAATFALV	8	46	375.2135794486017	748.4126059640034	2	375.2131652832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GAATFALV_	REV__PTPRF|p.V494A|1|0.34|ENSG00000142949|chr1:43591503-43591503|T/C|missense_variant	39.021493756699265	0.6623843612266921	6				NaN	NaN	0	NaN	8088	3363	11446
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11471	30.858	NaN	42283	30	0	15807	0.215	+			29209	NVPVGKVL	8	74	413.26342796858586	824.5123030039717	2	413.26324462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NVPVGKVL_	ENSG00000104517|ENST00000520539|UBR5;nc|ENSG00000104517|O95071-2|UBR5;UBR5|p.A1046Rfs*49|1|0.21|ENSG00000104517|chr8:102299518-102299519|-/G|frameshift_variant;UBR5|p.E2121Kfs*28|1|0.39|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant;UBR5|p.E2121Rfs*13|1|0.28|ENSG00000104517|chr8:102277120-102277121|-/T|frameshift_variant;UBR5|p.F2571Lfs*4|2|0.31|ENSG00000104517|chr8:102262044-102262044|A/-|frameshift_variant;UBR5|p.I1021*|1|0.41|ENSG00000104517|chr8:102300046-102300046|G/-|frameshift_variant;UBR5|p.I1021Hfs*5|1|0.23|ENSG00000104517|chr8:102300045-102300046|-/G|frameshift_variant;UBR5|p.K2120Rfs*13|1|0.24|ENSG00000104517|chr8:102277121-102277122|TT/-|frameshift_variant	38.80614096846853	0.6637206697844082	6				NaN	NaN	0	NaN	8103	3366	11470
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11472	30.862	NaN	33447	30	0	9547.7	0.106	+			6320	AVTDAIMSR	9	74	482.25001320610846	962.485473479017	2	482.2500915527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVTDAIMSR_	ENSG00000162298|ENST00000377190|SYVN1;ENST00000449943.5_1_11:64897669-64899838:-|nuORF;nc|ENSG00000162298|Q86TM6-2|SYVN1;nc|ENSG00000162298|Q86TM6-3|SYVN1;SYVN1|p.N368Qfs*129|1|0.33|ENSG00000162298|chr11:65130663-65130664|-/G|frameshift_variant;SYVN1|p.N368Tfs*117|1|0.4|ENSG00000162298|chr11:65130664-65130664|G/-|frameshift_variant	146.78539889680295	0.007618400906539062	6				NaN	NaN	0	NaN	8104	3366	11470
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11473	30.864	NaN	17470	30	0	3015.3	0.106	+			11913	FVAEQKVEY	9	66	556.784802720852	1111.5550525085039	2	556.7853393554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FVAEQKVEY_	ENSG00000114867|ENST00000346169|EIF4G1;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;ENST00000460829.5_1_3:184046782-184052693:+|nuORF;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1	159.27591364854348	0.004707062175358555	6				NaN	NaN	0	NaN	8105	3366	11470
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11474	30.866	NaN	11308	30	0	3797.4	0.106	+			42377	TAINTENIRLV	11	73	415.23826931774556	1242.6929785534367	3	415.23834228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TAINTENIRLV_	ENSG00000120063|ENST00000439174|GNA13;nc|ENSG00000120063|Q14344-2|GNA13	22.561587123415745	0.7531385481947795	6				NaN	NaN	0	NaN	8106	3366	11470
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11475	30.868	NaN	4681.1	30	0	433.11	0.106			+	9779	ENPVVVVVK	9	63	491.800278324723	NaN	0	491.8002014160156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ENPVVVVVK_	REV__ENSG00000214753|ENST00000301785|HNRNPUL2	53.08895987439943	0.18540527177656715	6				NaN	NaN	0	NaN	8107	3366	11470
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11476	30.869	NaN	5346.2	30	0	322.57	0.106	+			40212	STSDKIFFH	9	79	541.2696046381512	1080.5246563431024	2	541.2703247070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STSDKIFFH_	ENSG00000163625|ENST00000295888|WDFY3;nc|ENSG00000163625|Q8IZQ1-2|WDFY3	104.01359247289065	0.03510646158778409	6				NaN	NaN	0	NaN	8108	3366	11470
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11477	30.871	NaN	7354.5	30	0	2408.7	0.037	+			40213	STSDKIFFH	9	45	361.18208998480236	1080.524440554607	3	361.1819763183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STSDKIFFH_	ENSG00000163625|ENST00000295888|WDFY3;nc|ENSG00000163625|Q8IZQ1-2|WDFY3	49.44154591367651	0.3095138337212152	6				NaN	NaN	0	NaN	8109	3366	11470
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11495	30.907	NaN	4980.6	30	0	771.93	0.214	+			34878	RYVDRVTEF	9	66	592.8067253216726	1183.5988977101451	2	592.8070068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RYVDRVTEF_	ENSG00000108465|ENST00000338399|CDK5RAP3;ENST00000582482.1_1_17:46058511-46058865:+|nuORF;nc|ENSG00000108465|Q96JB5-2|CDK5RAP3;nc|ENSG00000108465|Q96JB5-3|CDK5RAP3;nc|ENSG00000108465|Q96JB5-4|CDK5RAP3	53.08895987439943	0.27122541748218487	6				NaN	NaN	0	NaN	8124	3369	11494
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11496	30.91	NaN	5707.6	30	0	1887	0.106			+	26687	LVHHDLLYT	9	39	370.87060015465454	1109.5899710641636	3	371.5413818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LVHHDLLYT_	REV__ENST00000368990.7_2_10:124152762-124159877:+|nuORF	25.450171626174864	0.5654022654467333	6				NaN	NaN	0	NaN	8125	3369	11494
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11497	30.912	NaN	7880.2	30	0	1670.7	0.106	+			30828	QEENITRAL	9	70	537.2829414326125	1072.5513299320248	2	537.283447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QEENITRAL_	ENSG00000099817|ENST00000615234|POLR2E;ENST00000586817.5_1_19:1089487-1094188:-|nuORF	80.45461616416974	0.09558281504443908	6				NaN	NaN	0	NaN	8126	3369	11494
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11498	30.914	NaN	4890.6	30	0	607.06	0.106				-1	 	0	63	423.60682659007415	2958.196850864319	7	423.7501525878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8127	3369	11494
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11499	30.916	NaN	2990.8	30	0	388.15	0.106	+			20435	KEVADAIRL	9	69	507.80097255985976	1013.5873921865195	2	507.8007507324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEVADAIRL_	ENSG00000078808|ENST00000360001|SDF4;nc|ENSG00000078808|Q9BRK5-2|SDF4;nc|ENSG00000078808|Q9BRK5-3|SDF4;nc|ENSG00000078808|Q9BRK5-4|SDF4;nc|ENSG00000078808|Q9BRK5-6|SDF4;nc|ENSG00000078808|Q9BRK5|SDF4	61.691277971877994	0.19951612995419254	6				NaN	NaN	0	NaN	8128	3369	11494
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11500	30.918	NaN	4164.8	30	0	984.06	0.106			+	-1	PLAIEVMY	8	61	476.2456638919257	950.4767748506514	2	476.244384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_PLAIEVM(Oxidation (M))Y_	REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-10|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-13|TTN;REV__nc|ENSG00000155657|Q8WZ42-2|TTN;REV__nc|ENSG00000155657|Q8WZ42-3|TTN;REV__nc|ENSG00000155657|Q8WZ42-4|TTN;REV__nc|ENSG00000155657|Q8WZ42-5|TTN;REV__nc|ENSG00000155657|Q8WZ42-7|TTN;REV__nc|ENSG00000155657|Q8WZ42-8|TTN;REV__nc|ENSG00000155657|Q8WZ42-9|TTN;REV__nc|ENSG00000155657|Q8WZ42|TTN;REV__TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;REV__TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;REV__TTN|p.I24998Nfs*2|1|0.35|ENSG00000155657|chr2:178566216-178566217|-/T|frameshift_variant;REV__TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;REV__TTN|p.K26626Nfs*34|1|0.34|ENSG00000155657|chr2:178561331-178561331|T/-|frameshift_variant;REV__TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;REV__TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;REV__TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant;REV__TTN|p.P22810Hfs*10|1|0.03|ENSG00000155657|chr2:178572780-178572781|-/AAAT|frameshift_variant;REV__TTN|p.V27442Cfs*4|1|0.05|ENSG00000155657|chr2:178558107-178558108|-/A|frameshift_variant	44.53106598305862	0.628196326904373	6				NaN	NaN	0	NaN	8129	3369	11494
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11501	30.92	NaN	4339	30	0	337.77	0.034				-1	VEMGRLGPA	9	65	473.24434569204993	944.4741384508999	2	473.2445373535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_VEM(Oxidation (M))GRLGPA_	ENSG00000169047|ENST00000305123|IRS1	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	8130	3369	11494
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11520	30.956	NaN	8958.6	30	0	1597.7	0.214	+			4424	ATIEELTEK	9	70	517.274218734002	1032.533884534804	2	517.2743530273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATIEELTEK_	ENSG00000159140|ENST00000356577|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-4|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-7|SON;nc|ENSG00000159140|P18583-9|SON	134.7655990226056	0.012935733000282069	6				NaN	NaN	0	NaN	8146	3372	11519
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11521	30.959	NaN	10690	30	0	1732.8	0.106	+			41497	SVPGRHLPG	9	63	460.25826171013176	918.5019704870635	2	461.25531005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVPGRHLPG_	ENST00000372629.4_1_X:102842228-102842288:+|nuORF;TCEAL4|p.L180Cfs*49|1|0.66|ENSG00000133142|chrX:103587210-103587210|T/-|frameshift_variant	31.954861631926434	0.5046124803899898	6				NaN	NaN	0	NaN	8147	3372	11519
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11522	30.961	NaN	7433.2	30	0	690.98	0.106	+			38121	SPVTLKEAY	9	73	504.27420734472906	1006.5338617562581	2	504.27386474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SPVTLKEAY_	ENSG00000183508|ENST00000369448|TENT5C	109.47833844074708	0.029530294723441826	6				NaN	NaN	0	NaN	8148	3372	11519
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11523	30.963	NaN	2957.2	30	0	311.05	0.106	+			960	AEKAFVSV	8	51	425.7370678338689	849.4595827345378	2	425.73681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEKAFVSV_	ABCC3|p.L968Afs*31|1|0.33|ENSG00000108846|chr17:50675920-50675921|-/G|frameshift_variant;ENSG00000108846|ENST00000285238|ABCC3;ENST00000502426.5_1_17:48736553-48755440:+|nuORF;nc|ENSG00000108846|O15438-2|ABCC3;nc|ENSG00000108846|O15438-4|ABCC3	64.20726635412375	0.4601301477144759	6				NaN	NaN	0	NaN	8149	3372	11519
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11524	30.965	NaN	3387.4	30	0	880.67	0.106			+	10828	FARMANTIKQ	10	49	393.8819651111274	1178.6240659335822	3	393.8816223144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FARMANTIKQ_	REV__ENSG00000167703|ENST00000301335|SLC43A2;REV__nc|ENSG00000167703|Q8N370-3|SLC43A2;REV__nc|ENSG00000167703|Q8N370-4|SLC43A2	29.550750289552195	0.6385079145554603	6				NaN	NaN	0	NaN	8150	3372	11519
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11525	30.967	NaN	5185	30	0	587.66	0.106	+			26241	LSSRGGGGGG	10	66	402.70174003904185	803.3889271448837	2	402.7013244628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSSRGGGGGG_	ENSG00000156026|ENST00000373053|MCU;MCU|p.N318Ifs*19|1|0.09|ENSG00000156026|chr10:72884356-72884357|-/TATGT|frameshift_variant;nc|ENSG00000156026|Q8NE86-2|MCU	26.69291269510374	0.6618461711292317	6				NaN	NaN	0	NaN	8151	3372	11519
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11526	30.968	NaN	2096.8	30	0	157.34	0.036			+	18921	IVNATEGYMV	10	67	548.76927090789	1095.52398888258	2	548.7685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IVNATEGYMV_	REV__tr|U7SFZ0|U7SFZ0_FUSNUFlavinreductaselikedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02288PE=3SV=1	44.116797842482775	0.5112108506279902	6				NaN	NaN	0	NaN	8152	3372	11519
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11544	31.004	NaN	60065	30	0	23528	0.214	+			41207	SVLDSSALK	9	78	460.25826171013176	918.5019704870635	2	460.2581787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVLDSSALK_	ENSG00000197077|ENST00000358431|KIAA1671;ENST00000494730.2_1_22:25573299-25581087:+|nuORF;nc|ENSG00000197077|Q9BY89-2|KIAA1671	114.8945686534367	0.024290463251177924	6				NaN	NaN	0	NaN	8167	3375	11543
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11545	31.008	NaN	6821.8	30	0	902.04	0.106	+			43986	TPGGTRIIY	9	68	489.27526414246876	976.5359753517375	2	489.274169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TPGGTRIIY_	ENSG00000148730|ENST00000373218|EIF4EBP2;ENSG00000187840|ENST00000338825|EIF4EBP1;ENSG00000243056|ENST00000310331|EIF4EBP3	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	8168	3375	11543
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11546	31.01	NaN	6734.9	30	0	2364.9	0.106			+	37584	SLNQIYVVR	9	47	364.5450395906415	1090.6132893721247	3	364.5449523925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLNQIYVVR_	REV__ENSG00000155846|ENST00000309241|PPARGC1B;REV__nc|ENSG00000155846|Q86YN6-2|PPARGC1B;REV__nc|ENSG00000155846|Q86YN6-3|PPARGC1B;REV__nc|ENSG00000155846|Q86YN6-4|PPARGC1B;REV__nc|ENSG00000155846|Q86YN6-5|PPARGC1B;REV__nc|ENSG00000155846|Q86YN6-6|PPARGC1B	32.81241826257853	0.4965981579233955	6				NaN	NaN	0	NaN	8169	3375	11543
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11547	31.012	NaN	6837.8	30	0	443.29	0.106	+			16657	HIFVYGPL	8	75	473.2626053179047	944.5106577026094	2	473.2622985839844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HIFVYGPL_	nc|ENSG00000108684|Q16515|ASIC2	43.626045697637714	0.6338121648150432	6				NaN	NaN	0	NaN	8170	3375	11543
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11548	31.014	NaN	5250.9	30	0	424.82	0.106	+			25448	LPQFRELGY	9	80	561.80046675548	1121.5863805777599	2	561.8013305664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LPQFRELGY_	ENSG00000154764|ENST00000285018|WNT7A	66.42927471994793	0.16001998865088202	6				NaN	NaN	0	NaN	8171	3375	11543
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11549	31.015	NaN	8147	30	0	2176.8	0.106	+			10405	EVFKERIGY	9	64	570.8060583523795	1139.597563771559	2	570.8060302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EVFKERIGY_	ENSG00000144426|ENST00000683969|NBEAL1;ENSG00000160796|ENST00000450053|NBEAL2;NBEAL1|p.A1274Qfs*17|1|0.1|ENSG00000144426|chr2:203135766-203135766|A/-|frameshift_variant;NBEAL1|p.D657Vfs*8|1|0.05|ENSG00000144426|chr2:203110256-203110257|-/TAAAAAA|frameshift_variant;NBEAL1|p.F1670Lfs*25|1|0.21|ENSG00000144426|chr2:203144843-203144843|T/-|frameshift_variant;NBEAL1|p.F2315Lfs*2|1|0.17|ENSG00000144426|chr2:203193900-203193900|T/-|frameshift_variant;NBEAL1|p.K2562Rfs*15|1|0.41|ENSG00000144426|chr2:203209306-203209306|A/-|frameshift_variant;NBEAL1|p.N2072Kfs*10|1|0.35|ENSG00000144426|chr2:203172825-203172826|-/A|frameshift_variant;NBEAL1|p.R472Sfs*8|1|0.06|ENSG00000144426|chr2:203107741-203107742|-/CAACATA|frameshift_variant;NBEAL1|p.S520Efs*20|1|0.39|ENSG00000144426|chr2:203107879-203107880|-/G|frameshift_variant;NBEAL1|p.T1311Nfs*3|1|0.08|ENSG00000144426|chr2:203135875-203135876|-/A|frameshift_variant;NBEAL2|p.C1705Vfs*45|1|0.24|ENSG00000160796|chr3:47002246-47002246|T/-|frameshift_variant;NBEAL2|p.P1303Lfs*63|1|0.21|ENSG00000160796|chr3:47000002-47000002|C/-|frameshift_variant;NBEAL2|p.Y1346Tfs*20|1|0.44|ENSG00000160796|chr3:47000132-47000132|T/-|frameshift_variant;nc|ENSG00000144426|Q6ZS30-1|NBEAL1;nc|ENSG00000144426|Q6ZS30|NBEAL1;nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2;nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2	95.81516180277367	0.04847050768394289	6				NaN	NaN	0	NaN	8172	3375	11543
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11550	31.017	NaN	19748	30	0	4999.8	0.038			+	12345	GDKVVEQMKK	10	70	387.8817719200845	1160.6234863604534	3	387.8815002441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GDKVVEQMKK_	REV__ENSG00000196422|ENST00000356818|PPP1R26;REV__PPP1R26|p.H1106Tfs*48|1|0.38|ENSG00000196422|chr9:135487822-135487822|C/-|frameshift_variant;REV__PPP1R26|p.S771Vfs*10|2|0.42|ENSG00000196422|chr9:135486815-135486815|C/-|frameshift_variant;REV__PPP1R26|p.T864Pfs*90|1|0.38|ENSG00000196422|chr9:135487096-135487096|C/-|frameshift_variant;REV__PPP1R26|p.V898Sfs*56|6|0.32|ENSG00000196422|chr9:135487197-135487197|G/-|frameshift_variant	42.33807565288922	0.5276008846745733	6				NaN	NaN	0	NaN	8173	3375	11543
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11568	31.053	NaN	13348	30	0	2919.4	0.214	+			35024	SACSFTFSK	9	68	517.7341108638519	1033.4536687945038	2	517.7343139648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SAC(Carbamidomethyl (C))SFTFSK_	ENSG00000131375|ENST00000253693|CAPN7;ENST00000443567.5_1_3:15282348-15292515:+|nuORF	126.24258497203832	0.01742065577488747	6				NaN	NaN	0	NaN	8188	3378	11567
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11569	31.057	NaN	8182.2	30	0	2655.9	0.106	+			27557	MPEKEPSVL	9	67	515.2680011759811	1028.5214494187621	2	515.267822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MPEKEPSVL_	ENSG00000155229|ENST00000438925|MMS19;ENST00000495415.5_1_10:99221527-99223714:-|nuORF;nc|ENSG00000155229|Q96T76-5|MMS19;nc|ENSG00000155229|Q96T76-8|MMS19;nc|ENSG00000155229|Q96T76-9|MMS19	88.17693792209575	0.07000514020414955	6				NaN	NaN	0	NaN	8189	3378	11567
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11570	31.059	NaN	5006	30	0	501.61	0.106	+			31934	QQPSNYGPM	9	56	511.22402091546866	1020.4334888977373	2	511.22412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QQPSNYGPM_	ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	8190	3378	11567
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11571	31.06	NaN	6372.4	30	0	907.62	0.106	+			2417	APAPSTVHF	9	67	463.7401848817776	925.4658168303553	2	463.7401123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_APAPSTVHF_	ENSG00000155090|ENST00000285407|KLF10;nc|ENSG00000155090|Q13118-2|KLF10	65.80317337860623	0.1652391959156183	6				NaN	NaN	0	NaN	8191	3378	11567
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11572	31.062	NaN	4409.6	30	0	888.59	0.106	+			33559	RLFVGSIPK	9	64	508.81628823492133	1015.6180235366427	2	508.816162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RLFVGSIPK_	ENSG00000125944|ENST00000302271|HNRNPR;ENSG00000135316|ENST00000369622|SYNCRIP;HNRNPR|p.L367Qfs*19|1|0.05|ENSG00000125944|chr1:23313620-23313621|-/TTTAATCTCT|frameshift_variant;HNRNPR|p.W594Gfs*15|1|0.23|ENSG00000125944|chr1:23310575-23310576|CA/-|frameshift_variant;nc|ENSG00000125944|O43390-2|HNRNPR;nc|ENSG00000125944|O43390-3|HNRNPR;nc|ENSG00000125944|O43390-4|HNRNPR;nc|ENSG00000271793|O60506-2|SYNCRIP;nc|ENSG00000271793|O60506-3|SYNCRIP;nc|ENSG00000271793|O60506-4|SYNCRIP;nc|ENSG00000271793|O60506-5|SYNCRIP	39.252832667884924	0.4290233611298554	6				NaN	NaN	0	NaN	8192	3378	11567
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11573	31.064	NaN	2493.8	30	0	493.52	0.106	+			35119	SAGSVGFLK	9	54	433.2426104661176	864.4706679990352	2	433.2423400878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SAGSVGFLK_	ENSG00000156011|ENST00000327040|PSD3;nc|ENSG00000156011|Q9NYI0|PSD3;PSD3|p.D956Rfs*11|1|0.17|ENSG00000156011|chr8:18556274-18556275|-/G|frameshift_variant;PSD3|p.D956Tfs*14|1|0.29|ENSG00000156011|chr8:18556275-18556275|G/-|frameshift_variant;PSD3|p.F625Lfs*6|1|0.25|ENSG00000156011|chr8:18804557-18804557|A/-|frameshift_variant;PSD3|p.L776Wfs*44|1|0.35|ENSG00000156011|chr8:18632699-18632699|A/-|frameshift_variant;PSD3|p.V655Efs*3|1|0.1|ENSG00000156011|chr8:18801329-18801330|-/CT|frameshift_variant	54.776311868738084	0.25715957988447635	6				NaN	NaN	0	NaN	8193	3378	11567
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11574	31.066	NaN	12164	30	0	2320.4	0.037			+	43868	TMFGLPTLFI	10	72	380.5434655051595	1138.6085671156784	3	380.873291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TMFGLPTLFI_	REV__ENSG00000262628|ENST00000575751|OR1D5	28.081489160057373	0.6505064946289502	6				NaN	NaN	0	NaN	8194	3378	11567
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11592	31.103	NaN	31884	30	0	5639.1	0.214				-1	LFTLLSWML	9	88	380.5434655051595	1138.6085671156784	3	380.5435791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LFTLLSWM(Oxidation (M))L_	ENSG00000221947|ENST00000408926|XKR9	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	8209	3381	11591
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11593	31.107	NaN	10474	30	0	2727.1	0.106	+			28074	NADPQAVTM	9	62	473.71852412584826	945.4224953184965	2	473.71832275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NADPQAVTM_	ENSG00000102316|ENST00000375068|MAGED2;nc|ENSG00000102316|Q9UNF1-2|MAGED2	65.15724298150197	0.17062369902793603	6				NaN	NaN	0	NaN	8210	3381	11591
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11594	31.109	NaN	3563.4	30	0	428.84	0.106	+			17565	IEAEKIAQV	9	68	500.7873776746876	999.5602024161752	2	500.7870788574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IEAEKIAQV_	ENSG00000107566|ENST00000421367|ERLIN1	68.84614121027924	0.14577793175421136	6				NaN	NaN	0	NaN	8211	3381	11591
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11595	31.111	NaN	7186.5	30	0	2864.1	0.106	+			30866	QEILERTGV	9	67	522.7877163303281	1043.560879727456	2	522.7880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QEILERTGV_	ENSG00000115677|ENST00000310931|HDLBP;ENST00000470710.1_1_2:242194755-242195742:-|nuORF;HDLBP|p.S551Kfs*2|1|0.11|ENSG00000115677|chr2:241248082-241248083|-/T|frameshift_variant	76.16968421966216	0.11411088698345859	6				NaN	NaN	0	NaN	8212	3381	11591
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11596	31.113	NaN	3913.9	30	0	1305	0.106			+	710	AEASLFRPY	9	65	527.2710583882357	1052.5275638432713	2	527.272216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEASLFRPY_	REV__ENSG00000123143|ENST00000242783|PKN1;REV__ENST00000585839.5_1_19:14580313-14582593:+|nuORF;REV__ENST00000586039.1_1_19:14581024-14581617:+|nuORF;REV__nc|ENSG00000123143|Q16512-2|PKN1	56.72105179125745	0.24094814563026265	6				NaN	NaN	0	NaN	8213	3381	11591
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11597	31.114	NaN	3598.8	30	0	401.49	0.033	+			11714	FSAHALKL	8	62	443.7611893330922	885.5078257329844	2	443.7607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FSAHALKL_	ENSG00000048828|ENST00000277165|FAM120A;FAM120A|p.V551Sfs*6|1|0.21|ENSG00000048828|chr9:93529491-93529491|C/-|frameshift_variant;nc|ENSG00000048828|Q9NZB2-2|FAM120A;nc|ENSG00000048828|Q9NZB2-4|FAM120A;nc|ENSG00000048828|Q9NZB2-5|FAM120A;nc|ENSG00000048828|Q9NZB2-6|FAM120A	71.29570347882199	0.39610197767395533	6				NaN	NaN	0	NaN	8214	3381	11591
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11598	31.115	NaN	3788.2	30	0	221.14	0.139	+			35297	SAMDVAKAY	9	65	478.231276630505	954.4480003278101	2	478.23077392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SAMDVAKAY_	ANKEF1|p.Y712Sfs*5|1|0.07|ENSG00000132623|chr20:10054561-10054562|-/CCTGGAA|frameshift_variant;ENSG00000132623|ENST00000378392|ANKEF1	104.0567914643314	0.03506238181059741	6				NaN	NaN	0	NaN	8215	3381	11591
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11616	31.151	NaN	32681	30	0	24377	0.214				-1	 	0	53	372.20177571130444	742.3889984894089	2	372.2015380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8230	3384	11615
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11617	31.154	NaN	16111	30	0	2041.6	0.106	+			19833	KEDSKLIAL	9	83	508.80320849533	1015.59186405746	2	508.80291748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEDSKLIAL_	ENSG00000090686|ENST00000308271|USP48;nc|ENSG00000090686|Q86UV5-2|USP48;nc|ENSG00000090686|Q86UV5-5|USP48;nc|ENSG00000090686|Q86UV5-8|USP48;USP48|p.L982Ffs*9|1|0.08|ENSG00000090686|chr1:21690037-21690038|-/GG|frameshift_variant	106.68306549817024	0.032382560583716295	6				NaN	NaN	0	NaN	8231	3384	11615
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11618	31.156	NaN	8874.5	30	0	2441.3	0.106	+			45316	TVSELVISK	9	74	488.28965618287384	974.5647594325477	2	488.28936767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVSELVISK_	ENSG00000189180|ENST00000432900|ZNF33A;ENSG00000196693|ENST00000359467|ZNF33B;nc|ENSG00000189180|Q06730-3|ZNF33A;nc|ENSG00000189180|Q06730|ZNF33A;ZNF33A|p.E689Rfs*83|1|0.35|ENSG00000189180|chr10:38056188-38056188|G/-|frameshift_variant;ZNF33A|p.Y580Cfs*21|1|0.05|ENSG00000189180|chr10:38055865-38055866|-/GTGTGTGTTCTCTG|frameshift_variant	81.52500206392136	0.09095445986635249	6				NaN	NaN	0	NaN	8232	3384	11615
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11619	31.158	NaN	21510	30	0	2959.2	0.106	+			3768	ATAELIMSR	9	72	496.2657394284144	990.5169259236288	2	496.265380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATAELIMSR_	ENSG00000105677|ENST00000222284|TMEM147;ENST00000477168.6_1_19:36036641-36037810:+|nuORF;ENST00000595467.1_1_19:36037522-36037810:+|nuORF;nc|ENSG00000105677|Q9BVK8-2|TMEM147	155.5846463517096	0.005567437401040498	6				NaN	NaN	0	NaN	8233	3384	11615
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11620	31.16	NaN	2315.1	30	0	370.1	0.106			+	-1	SVKSIYGMI	9	66	507.2705588724991	1012.5265648117983	2	507.27032470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_SVKSIYGM(Oxidation (M))I_	REV__ENSG00000142347|ENST00000644032|MYO1F;REV__ENST00000594774.5_1_19:8618146-8642307:-|nuORF;REV__ENST00000594977.5_1_19:8612968-8642307:-|nuORF;REV__ENST00000595325.5_1_19:8616850-8642307:-|nuORF;REV__ENST00000598529.5_1_19:8616563-8619410:-|nuORF;REV__MYO1F|p.L967Cfs*94|1|0.31|ENSG00000142347|chr19:8522785-8522785|G/-|frameshift_variant;REV__MYO1F|p.N396Kfs*13|1|0.44|ENSG00000142347|chr19:8548117-8548118|-/T|frameshift_variant	34.172542307311794	0.4838870758800184	6				NaN	NaN	0	NaN	8234	3384	11615
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11621	31.162	NaN	3612.2	30	0	675.02	0.033	+			42439	TALLPRPQ	8	63	448.27159185659224	894.5286307799845	2	448.2712707519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TALLPRPQ_	ENST00000379902.7_1_12:53457662-53457908:+|nuORF	37.15910966729921	0.6739408393984688	6				NaN	NaN	0	NaN	8235	3384	11615
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11622	31.162	NaN	6092.3	30	0	1190	0.143	+			33478	RIYDIFRSK	9	62	399.89642518274155	1196.6674461484247	3	399.89599609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RIYDIFRSK_	ENSG00000133805|ENST00000396553|AMPD3;nc|ENSG00000133805|Q01432-3|AMPD3;nc|ENSG00000133805|Q01432-4|AMPD3;nc|ENSG00000133805|Q01432-5|AMPD3;nc|ENSG00000133805|Q01432-6|AMPD3	61.76455937419982	0.19890525308472518	6				NaN	NaN	0	NaN	8236	3384	11615
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11640	31.2	NaN	9005.1	30	0	917.77	0.214	+			48756	VTVQEMVTK	9	66	517.7811111650972	1033.5476693969943	2	517.78125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTVQEMVTK_	ENSG00000137076|ENST00000314888|TLN1;ENST00000486788.2_1_9:35704327-35706084:-|nuORF;nc|ENSG00000137076|Q9Y490-2|TLN1	191.44940797552337	0.00014666235100428603	6				NaN	NaN	0	NaN	8251	3387	11639
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11641	31.204	NaN	5870.2	30	0	922.84	0.106	+			7218	DAISKTYSY	9	60	524.2537031001733	1046.4928532671465	2	524.2538452148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DAISKTYSY_	ENSG00000140988|ENST00000343262|RPS2;ENST00000397318.4_1_X:40794237-40794825:-|nuORF;ENST00000438210.1_1_1:40428398-40429073:+|nuORF;ENST00000441047.1_1_17:51834352-51834658:-|nuORF;ENST00000443417.1_1_9:102879039-102879699:-|nuORF;ENST00000475555.1_1_4:144270430-144270667:-|nuORF;ENST00000494359.1_1_11:17250107-17250695:+|nuORF;ENST00000529806.5_1_16:2012098-2012518:-|nuORF;ENST00000532746.5_2_16:2012101-2013785:-|nuORF;ENST00000533872.5_1_16:2012101-2013018:-|nuORF;RPL18-RPS2|1|fusion	76.16968421966216	0.11411088698345859	6				NaN	NaN	0	NaN	8252	3387	11639
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11642	31.206	NaN	6062.8	30	0	1040.1	0.106	+			34295	RTLHTEEL	8	70	499.7688014363009	997.5230499394019	2	499.7687072753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RTLHTEEL_	ENSG00000240563|ENST00000498273|L1TD1;L1TD1|p.Q683Hfs*3|1|0.25|ENSG00000240563|chr1:62210822-62210823|AG/-|frameshift_variant	40.77816245573522	0.6514838689002179	6				NaN	NaN	0	NaN	8253	3387	11639
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11643	31.208	NaN	32585	30	0	12663	0.106	+			48325	VTFSRRFG	8	70	485.26613104537387	968.5177091575478	2	485.2657470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTFSRRFG_	ENST00000300688.7_1_11:118272331-118272397:+|nuORF	65.80317337860623	0.44433089765398776	6				NaN	NaN	0	NaN	8254	3387	11639
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11644	31.21	NaN	2984.2	30	0	330.6	0.106	+			22678	KVADFGLVR	9	64	502.79856387981323	1003.5825748264265	2	502.7984313964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KVADFGLVR_	ENSG00000174292|ENST00000688331|TNK1;nc|ENSG00000174292|Q13470|TNK1	49.46582953369473	0.3092289965801417	6				NaN	NaN	0	NaN	8255	3387	11639
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11645	31.212	NaN	2372.6	30	0	275.04	0.036	+			3371	ASNYEVIMK	9	62	527.7673970931487	NaN	0	527.7675170898438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASNYEVIMK_	ENSG00000068654|ENST00000263857|POLR1A	72.2432373244024	0.09796301979040985	6				NaN	NaN	0	NaN	8256	3387	11639
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11646	31.212	NaN	2821.7	30	0	240.19	0.139	+			13045	GEVVTVRV	8	57	429.7557505622948	857.4969481913896	2	429.75567626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GEVVTVRV_	ENSG00000182827|ENST00000366812|ACBD3	60.11826168202944	0.5006107059937851	6				NaN	NaN	0	NaN	8257	3387	11639
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11664	31.251	NaN	20339	30	0	6392.8	0.214	+			4441	ATILAGDIKVK	11	66	376.90451434983424	1127.6917136497027	3	376.9044189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATILAGDIKVK_	ENSG00000170604|ENST00000302165|IRF2BP1	82.83050618871818	0.12877585057862004	6				NaN	NaN	0	NaN	8272	3390	11663
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11665	31.255	NaN	8483	30	0	807.01	0.106	+			2503	APSVVKVSY	9	78	475.2733393114452	948.5321256896905	2	475.2713928222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_APSVVKVSY_	ENSG00000127616|ENST00000344626|SMARCA4;ENST00000592604.5_1_19:11123597-11172489:+|nuORF;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;nc|ENSG00000127616|P51532-5|SMARCA4;SMARCA4|p.G1136Afs*4|1|0.27|ENSG00000127616|chr19:11030751-11030751|G/-|frameshift_variant;SMARCA4|p.P1453Lfs*10|1|0.31|ENSG00000127616|chr19:11041491-11041491|C/-|frameshift_variant	123.20810148215591	0.019257656778428764	6				NaN	NaN	0	NaN	8273	3390	11663
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11666	31.257	NaN	3295.2	30	0	337.67	0.106	+			31805	QPMNPTQNM	9	69	530.7308024457595	1059.447051958319	2	530.7313232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QPMNPTQNM_	ENSG00000135387|ENST00000341394|CAPRIN1;nc|ENSG00000135387|Q14444-2|CAPRIN1	51.19269402634007	0.2889735674168909	6				NaN	NaN	0	NaN	8274	3390	11663
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11667	31.259	NaN	2350.8	30	0	199.07	0.106			+	5973	AVLPFMEL	8	60	460.2514755784	918.4883982236	2	460.25103759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVLPFMEL_	REV__ENST00000357508.5_1_1:45190214-45190565:+|nuORF	62.97842346883844	0.4722955155785405	6				NaN	NaN	0	NaN	8275	3390	11663
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11668	31.261	NaN	2945.3	30	0	425.24	0.106	+			18334	IPVGTHEF	8	57	450.2346396190255	898.454726304851	2	450.2344970703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IPVGTHEF_	ENSG00000273749|ENST00000617928|CYFIP1;KBTBD2-CYFIP1|1|fusion;nc|ENSG00000273749|Q7L576-2|CYFIP1;nc|ENSG00000273749|Q7L576-3|CYFIP1	65.89745868150666	0.44339748671293633	6				NaN	NaN	0	NaN	8276	3390	11663
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11669	31.262	NaN	2105.1	30	0	147.28	0.037			+	33485	RKCSRSSRY	9	60	571.7955908620384	1141.5766287908766	2	571.7954711914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RKCSRSSRY_	REV__ENST00000196371.9_1_5:41862769-41870602:-|nuORF	30.317721548370564	0.5199124245378496	6				NaN	NaN	0	NaN	8277	3390	11663
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11670	31.263	NaN	1844.1	30	0	160.73	0.141	+			27563	MPEVRQSSF	9	60	540.7613166668477	NaN	0	540.7619018554688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MPEVRQSSF_	ENSG00000083312|ENST00000337273|TNPO1;ENSG00000105576|ENST00000425528|TNPO2;ENST00000426249.1_1_17:18365525-18365891:+|nuORF;ENST00000436471.2_1_17:20385129-20386047:-|nuORF;nc|ENSG00000083312|Q92973-2|TNPO1;nc|ENSG00000083312|Q92973-3|TNPO1;nc|ENSG00000105576|O14787-2|TNPO2;TNPO1|p.C844Vfs*45|4|0.31|ENSG00000083312|chr5:72903718-72903718|T/-|frameshift_variant	47.95952297671804	0.22075498469600283	6				NaN	NaN	0	NaN	8278	3390	11663
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11688	31.301	NaN	30953	30	0	4048.6	0.214	+			4657	ATLQEALAH	9	88	477.2561581243867	952.4977633155734	2	477.2557373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATLQEALAH_	ENSG00000137497|ENST00000393695|NUMA1;nc|ENSG00000137497|Q14980-2|NUMA1;nc|ENSG00000137497|Q14980-3|NUMA1;nc|ENSG00000137497|Q14980-4|NUMA1;NUMA1|p.K1766Rfs*2|1|0.39|ENSG00000137497|chr11:72007357-72007357|G/-|frameshift_variant;NUMA1|p.L1786Pfs*18|1|0.23|ENSG00000137497|chr11:72007295-72007296|-/G|frameshift_variant	162.25246889848123	0.0040893836092247005	6				NaN	NaN	0	NaN	8293	3393	11687
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11689	31.305	NaN	18841	30	0	8064.1	0.106				-1	 	0	48	350.20681713147206	698.3990813297441	2	350.2066650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8294	3393	11687
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11690	31.307	NaN	6903.4	30	0	1469.4	0.106	+			42276	TADARALL	8	57	415.739798467513	829.4650440018261	2	415.7395324707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TADARALL_	ENSG00000077150|ENST00000661543|NFKB2;ENST00000336486.5_1_10:104157832-104159780:+|nuORF;nc|ENSG00000077150|Q00653-4|NFKB2	60.29395666154354	0.49887135096048313	6				NaN	NaN	0	NaN	8295	3393	11687
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11691	31.309	NaN	3463.7	30	0	743.26	0.036	+			23788	LCLSEIHKM	9	70	537.2790136003276	1072.5434742674552	2	537.27880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LCLSEIHKM_	ENSG00000171105|ENST00000302850|INSR;INSR|p.G1342Afs*23|1|0.12|ENSG00000171105|chr19:7117180-7117180|C/-|frameshift_variant;nc|ENSG00000171105|P06213-2|INSR	53.351449002276354	0.2690372970092375	6				NaN	NaN	0	NaN	8296	3393	11687
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11709	31.346	NaN	17449	30	0	4444.1	0.214	+			33112	REMDEQIRL	9	73	595.3031637546683	1188.5917745761365	2	595.3035888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_REMDEQIRL_	ENST00000413233.1_1_7:116612221-116612569:-|nuORF;ENST00000600996.1_1_19:42012510-42012810:+|nuORF;nc|ENSG00000143549|P06753-2|TPM3;nc|ENSG00000143549|P06753-3|TPM3;nc|ENSG00000143549|P06753-6|TPM3	152.06079943815163	0.00638878961959199	6				NaN	NaN	0	NaN	8311	3396	11708
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11710	31.35	NaN	6514.9	30	0	1689.6	0.106	+			3282	ASLPPTKK	8	55	421.2606848030823	840.5068166729646	2	421.2605895996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASLPPTKK_	ENSG00000166268|ENST00000552032|MYRFL;ENSG00000186409|ENST00000657597|CCDC30;nc|ENSG00000186409|Q5VVM6-2|CCDC30;nc|ENSG00000186409|Q5VVM6|CCDC30	37.81151784470057	0.6698925118251505	6				NaN	NaN	0	NaN	8312	3396	11708
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11711	31.352	NaN	4091.8	30	0	967.1	0.106	+			44637	TTFTALTEK	9	58	506.2716375134808	1010.5287220937616	2	506.2718200683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TTFTALTEK_	ENSG00000113578|ENST00000337706|FGF1;nc|ENSG00000113578|P05230-2|FGF1	79.71258880314673	0.09879134589249085	6				NaN	NaN	0	NaN	8313	3396	11708
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11712	31.354	NaN	1927.6	30	0	1096.8	0.106				-1	 	0	33	336.1911332166955	670.367713500191	2	336.19110107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8314	3396	11708
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11713	31.356	NaN	3050.6	30	0	531.41	0.106			+	12937	GESRIQIL	8	58	458.26646080499705	914.5183686767941	2	459.2689208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GESRIQIL_	REV__ENST00000559051.1_1_15:65411613-65412071:-|nuORF	31.954861631926434	0.7126016770032289	6				NaN	NaN	0	NaN	8315	3396	11708
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11714	31.358	NaN	1002.2	30	0	93.712	0.037			+	-1	LCIFVGLTYS	10	41	586.8067626953125	NaN	0	586.8067626953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_LC(Carbamidomethyl (C))IFVGLTYS_	REV__ADAP1|p.H193Tfs*8|1|0.32|ENSG00000105963|chr7:904197-904197|G/-|frameshift_variant;REV__chr7:900613-904126|469|13.6|0.0|20.38|-|ENST00000649206|ADAP1,COX19;REV__ENSG00000105963|ENST00000265846|ADAP1;REV__nc|ENSG00000105963|O75689-2|ADAP1	21.9598887501803	0.4201028297492154	6				NaN	NaN	0	NaN	8316	3396	11708
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11715	31.358	NaN	2992.9	30	0	527.71	0.146			+	-1	MGKGNSPCVTM	11	45	380.8334655761719	NaN	0	380.8334655761719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_MGKGNSPCVTM(Oxidation (M))_	REV__ENST00000359314.5_1_6:47471138-47501404:+|nuORF	30.568863376406313	0.42918353898720446	6				NaN	NaN	0	NaN	8317	3396	11708
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11733	31.396	NaN	5188.6	30	0	688.86	0.214	+			42214	TAAGNTISM	9	63	433.20773398259007	864.4009150319802	2	433.207763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAAGNTISM_	ENSG00000130940|ENST00000377022|CASZ1	112.41091882917199	0.026537921851008135	6				NaN	NaN	0	NaN	8332	3399	11732
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11734	31.4	NaN	4620.4	30	0	964.63	0.106	+			40799	SVDSLPLAK	9	62	465.26883912763583	928.5231253220717	2	465.2684020996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVDSLPLAK_	ENSG00000110723|ENST00000265843|EXPH5;nc|ENSG00000110723|Q8NEV8-2|EXPH5	52.936696900407355	0.27249468807391813	6				NaN	NaN	0	NaN	8333	3399	11732
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11735	31.402	NaN	3930.1	30	0	1845.8	0.106			+	19127	IYLVIDLFP	9	41	364.8828268571257	1091.6266511715771	3	364.88299560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IYLVIDLFP_	REV__ENSG00000117528|ENST00000370214|ABCD3;REV__nc|ENSG00000117528|P28288-2|ABCD3;REV__nc|ENSG00000117528|P28288-3|ABCD3	27.882242232435846	0.5426732730940306	6				NaN	NaN	0	NaN	8334	3399	11732
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11736	31.404	NaN	2694.9	30	0	241.31	0.106	+			40005	STMSAEWVSK	10	62	563.2658582988726	1124.517163664545	2	563.2670288085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STMSAEWVSK_	DHX36|p.M705Nfs*20|1|0.33|ENSG00000174953|chr3:154284905-154284906|-/T|frameshift_variant;DHX36|p.R854Efs*4|3|0.36|ENSG00000174953|chr3:154280586-154280586|T/-|frameshift_variant;ENSG00000174953|ENST00000496811|DHX36;nc|ENSG00000174953|Q9H2U1-2|DHX36;nc|ENSG00000174953|Q9H2U1-3|DHX36	123.20810148215591	0.02279876478776198	6				NaN	NaN	0	NaN	8335	3399	11732
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11737	31.405	NaN	5823.4	30	0	2869.8	0.106	+			41036	SVIDGNLEL	9	59	480.25597944459395	958.4974059559879	2	480.2552185058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVIDGNLEL_	ENSG00000198435|ENST00000356628|NRARP	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	8336	3399	11732
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11738	31.407	NaN	3115.4	30	0	1056.5	0.035			+	32012	QRLPDAPPL	9	55	503.78758101101965	1005.5606090888393	2	503.7875061035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QRLPDAPPL_	REV__ENSG00000183779|ENST00000331569|ZNF703	35.61828744233558	0.47037581924408073	6				NaN	NaN	0	NaN	8337	3399	11732
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11739	31.408	NaN	2258.5	30	0	149.73	0.14			+	38383	SRTATVSYN	9	62	499.7503967285156	NaN	0	499.7503967285156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SRTATVSYN_	REV__ENSG00000115602|ENST00000233954|IL1RL1;REV__nc|ENSG00000115602|Q01638-2|IL1RL1;REV__nc|ENSG00000115602|Q01638-3|IL1RL1;REV__nc|ENSG00000115602|Q01638-4|IL1RL1	31.529811441608018	0.3183796599642538	6				NaN	NaN	0	NaN	8338	3399	11732
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11757	31.447	NaN	61608	30	0	12684	0.214	+			47941	VSMDYAISK	9	89	507.2521625609969	1012.4897721887938	2	507.25201416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSMDYAISK_	ENSG00000196453|ENST00000247930|ZNF777;ZNF777|p.P504Rfs*5|1|0.44|ENSG00000196453|chr7:149432761-149432761|G/-|frameshift_variant	159.27591364854348	0.004707062175358555	6				NaN	NaN	0	NaN	8353	3402	11756
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11758	31.451	NaN	34080	30	0	3630.2	0.106	+			16112	HDLVIKSL	8	97	462.77917941504427	923.5438058968886	2	462.77886962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HDLVIKSL_	ENSG00000100342|ENST00000397278|APOL1;nc|ENSG00000100342|O14791-2|APOL1;nc|ENSG00000100342|O14791-3|APOL1	143.8867514904718	0.2724165679903577	6				NaN	NaN	0	NaN	8354	3402	11756
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11759	31.453	NaN	3234	30	0	764.2	0.106			+	7679	DLFFLDFL	8	59	515.2680011759811	1028.5214494187621	2	515.2681274414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DLFFLDFL_	REV__ENST00000423113.5_1_10:33190231-33190324:-|nuORF	60.29395666154354	0.49887135096048313	6				NaN	NaN	0	NaN	8355	3402	11756
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11760	31.455	NaN	7759.1	30	0	1588.1	0.106			+	4858	ATPLMKRQTAL	11	56	415.90441706360195	1244.691421791006	3	415.90435791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_ATPLM(Oxidation (M))KRQTAL_	REV__ENST00000227155.8_1_11:44640863-44641010:+|nuORF	53.59686742100583	0.38061189074210516	6				NaN	NaN	0	NaN	8356	3402	11756
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11761	31.457	NaN	6213.4	30	0	1346.1	0.106	+			39574	STGMNLLKL	9	70	488.7782669582751	975.5419809833502	2	489.2793273925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STGMNLLKL_	nc|ENSG00000158201|Q8WU67-2|ABHD3	71.87747018426188	0.13267044672804276	6				NaN	NaN	0	NaN	8357	3402	11756
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11762	31.458	NaN	7911.1	30	0	1479.1	0.036	+			44966	TVCDLIQSK	9	70	532.2764795952734	1062.5384062573467	2	532.27783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_TVC(Carbamidomethyl (C))DLIQSK_	ENSG00000030582|ENST00000053867|GRN;ENST00000585348.1_1_17:42428425-42428671:+|nuORF;nc|ENSG00000030582|P28799-2|GRN	154.1183686248401	0.005909203230691971	6				NaN	NaN	0	NaN	8358	3402	11756
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11763	31.459	NaN	9896.2	30	0	1142.8	0.14	+			46379	VELAESRAL	9	63	494.27760713325733	986.5406613333147	2	494.2768249511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VELAESRAL_	ENST00000340533.8_2_18:71959085-71959217:-|nuORF	93.5975768576971	0.05472259948179787	6				NaN	NaN	0	NaN	8359	3402	11756
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11781	31.498	NaN	7016.3	30	0	3090.9	0.214				-1	 	0	48	372.20177571130444	742.3889984894089	2	372.20166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8374	3405	11780
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11782	31.502	NaN	9513.9	30	0	1056.1	0.106	+			46509	VEVEKESVL	9	76	516.2860530270688	1030.5575531209374	2	516.284912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VEVEKESVL_	ENSG00000156017|ENST00000376834|CARNMT1	90.60085204095205	0.06317133949006545	6				NaN	NaN	0	NaN	8375	3405	11780
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11783	31.504	NaN	10150	30	0	1658.8	0.106	+			22034	KSIDFPLTK	9	78	524.8056043230364	1047.5966557128727	2	524.805908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KSIDFPLTK_	ENSG00000084073|ENST00000372759|ZMPSTE24	131.115847015877	0.014647977962315902	6				NaN	NaN	0	NaN	8376	3405	11780
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11784	31.506	NaN	5420.8	30	0	2000.3	0.106	+			30840	QEFVSRTL	8	64	490.2642881158874	978.5140232985748	2	490.2637023925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QEFVSRTL_	ENSG00000132470|ENST00000200181|ITGB4;nc|ENSG00000132470|P16144-2|ITGB4;nc|ENSG00000132470|P16144-3|ITGB4;nc|ENSG00000132470|P16144-4|ITGB4	45.02220120713402	0.6251487313365616	6				NaN	NaN	0	NaN	8377	3405	11780
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11785	31.508	NaN	3189.1	30	0	481.86	0.106				-1	 	0	50	377.746234458716	753.477915984232	2	377.74615478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8378	3405	11780
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11786	31.509	NaN	2305.8	30	0	392.51	0.035	+			6792	CFQAASSTM	9	57	501.70451947015516	1001.3944860071103	2	501.7046813964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_C(Carbamidomethyl (C))FQAASSTM_	ENSG00000112685|ENST00000230449|EXOC2	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	8379	3405	11780
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11787	31.51	NaN	2987.2	30	0	210.31	0.138			+	29508	PDLGTVSI	8	55	401.22150141762523	800.4284499020505	2	401.2213134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PDLGTVSI_	REV__ENSG00000143178|ENST00000367821|TBX19;REV__TBX19|p.S376Tfs*13|1|0.16|ENSG00000143178|chr1:168312782-168312782|G/-|frameshift_variant	57.81127852772723	0.5234495074909924	6				NaN	NaN	0	NaN	8380	3405	11780
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11805	31.548	NaN	22791	30	0	12760	0.214	+			15956	HAGPVINTL	9	66	461.2613933607186	920.5082337882372	2	461.2611389160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HAGPVINTL_	CREBBP|p.Q2411Sfs*2|1|0.24|ENSG00000005339|chr16:3727816-3727816|G/-|frameshift_variant;ENSG00000005339|ENST00000262367|CREBBP;nc|ENSG00000005339|Q92793-2|CREBBP	93.19546047674547	0.05585629608842056	6				NaN	NaN	0	NaN	8395	3408	11804
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11806	31.551	NaN	8129.3	30	0	2454.2	0.106	+			48938	VVEGSFVYK	9	61	514.2766623011121	1026.538771669024	2	514.2766723632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVEGSFVYK_	ENSG00000203879|ENST00000447750|GDI1;ENST00000491154.1_1_X:153666748-153668487:+|nuORF;GDI1|p.G114D|1|0.12|ENSG00000203879|chrX:154439093-154439093|G/A|missense_variant	98.62937762414208	0.04060045538121712	6				NaN	NaN	0	NaN	8396	3408	11804
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11807	31.553	NaN	70529	30	0	32408	0.106	+			37075	SISDKFFQK	9	66	367.1975397997119	1098.5707899993356	3	367.197509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SISDKFFQK_	ENSG00000089472|ENST00000343002|HEPH;HEPH|p.R1086Qfs*4|1|0.29|ENSG00000089472|chrX:66266444-66266445|-/C|frameshift_variant;nc|ENSG00000089472|Q9BQS7-2|HEPH;nc|ENSG00000089472|Q9BQS7-3|HEPH;nc|ENSG00000089472|Q9BQS7-4|HEPH	51.19269402634007	0.2889735674168909	6				NaN	NaN	0	NaN	8397	3408	11804
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11808	31.555	NaN	15018	30	0	2017	0.106	+			35699	SDKLYKLS	8	77	477.26883260139743	952.5231122695949	2	477.2685852050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SDKLYKLS_	ENSG00000183091|ENST00000397345|NEB;nc|ENSG00000183091|P20929-1|NEB;nc|ENSG00000183091|P20929-3|NEB;nc|ENSG00000183091|P20929-4|NEB;NEB|p.L4198Cfs*51|1|0.35|ENSG00000183091|chr2:151568357-151568357|G/-|frameshift_variant;NEB|p.N3442Tfs*4|1|0.2|ENSG00000183091|chr2:151618297-151618297|T/-|frameshift_variant	67.49366992349736	0.4277823096851425	6				NaN	NaN	0	NaN	8398	3408	11804
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11809	31.557	NaN	4712.7	30	0	584.97	0.106			+	37480	SLKLPGASM	9	63	452.25375704350245	902.4929611538049	2	452.2547302246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SLKLPGASM_	REV__ENST00000577439.1_1_18:5241093-5241812:+|nuORF;REV__ENST00000582363.1_1_18:5241075-5241255:+|nuORF	68.78682469695295	0.14603441672067394	6				NaN	NaN	0	NaN	8399	3408	11804
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11810	31.559	NaN	5392.5	30	0	1245.9	0.036			+	-1	SSFCSLVHI	9	56	350.5075297134193	1048.5007597404579	3	350.5076904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_SSFC(Carbamidomethyl (C))SLVHI_	REV__ENST00000269601.9_1_18:77733839-77737655:-|nuORF	47.657333605630114	0.33044192980041115	6				NaN	NaN	0	NaN	8400	3408	11804
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11811	31.56	NaN	11169	30	0	1173.5	0.138	+			35141	SAIAAVIAR	9	60	436.27174438595915	870.5289358387183	2	436.2718505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SAIAAVIAR_	ENSG00000165949|ENST00000612813|IFI27;nc|ENSG00000165949|P40305-1|IFI27;nc|ENSG00000165949|P40305-3|IFI27;nc|ENSG00000165949|P40305-4|IFI27	143.8867514904718	0.008656634767784652	6				NaN	NaN	0	NaN	8401	3408	11804
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11829	31.595	NaN	23872	30	0	5281.7	0.214	+			4253	ATGDVALLR	9	77	458.26646080499705	914.5183686767941	2	458.2662658691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATGDVALLR_	ENSG00000100605|ENST00000267615|ITPK1	171.53180478179638	0.0025054460641941692	6				NaN	NaN	0	NaN	8416	3411	11828
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11830	31.599	NaN	20602	30	0	8834.7	0.106			+	-1	STFHNLLMAP	10	54	382.85879642342456	1145.5545598704737	3	382.8584899902344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_STFHNLLM(Oxidation (M))AP_	REV__ZCCHC14|p.V596A|1|0.48|ENSG00000140948|chr16:87412523-87412523|A/G|missense_variant	30.317721548370564	0.6322445173429027	6				NaN	NaN	0	NaN	8417	3411	11828
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11831	31.601	NaN	27908	30	0	3720.8	0.106	+			45483	TYDKGYQF	8	82	511.23517129282925	1020.4557896524585	2	511.2349548339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TYDKGYQF_	ENSG00000139197|ENST00000675855|PEX5;nc|ENSG00000139197|P50542-2|PEX5;nc|ENSG00000139197|P50542-3|PEX5;nc|ENSG00000139197|P50542-4|PEX5	93.19546047674547	0.2677966331495483	6				NaN	NaN	0	NaN	8418	3411	11828
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11832	31.602	NaN	8627.8	30	0	1329.4	0.106			+	3865	ATANLEILK	9	68	486.7898682580918	971.5651835829837	2	486.78961181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATANLEILK_	REV__ENSG00000203995|ENST00000371528|ZYG11A;REV__ZYG11A|p.V135A|1|0.16|ENSG00000203995|chr1:52857145-52857145|T/C|missense_variant	90.60085204095205	0.06317133949006545	6				NaN	NaN	0	NaN	8419	3411	11828
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11833	31.604	NaN	4039.9	30	0	317.4	0.106	+			46023	VAVQVRAL	8	63	428.27410245562413	854.5336519780483	2	428.2738952636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VAVQVRAL_	ENST00000561142.5_1_14:24605441-24607359:+|nuORF	68.484700416344	0.4195245774506064	6				NaN	NaN	0	NaN	8420	3411	11828
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11834	31.606	NaN	3899	30	0	531.9	0.106	+			37076	SISDKFFQK	9	68	550.293347864177	NaN	0	550.2931518554688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SISDKFFQK_	ENSG00000089472|ENST00000343002|HEPH;HEPH|p.R1086Qfs*4|1|0.29|ENSG00000089472|chrX:66266444-66266445|-/C|frameshift_variant;nc|ENSG00000089472|Q9BQS7-2|HEPH;nc|ENSG00000089472|Q9BQS7-3|HEPH;nc|ENSG00000089472|Q9BQS7-4|HEPH	117.81106730687013	0.0026430897281881707	6				NaN	NaN	0	NaN	8421	3411	11828
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11835	31.608	NaN	13336	30	0	3679.9	0.034	+			39106	SSSVVVLAGL	10	72	466.2766455415552	930.5387381499104	2	466.2762145996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSSVVVLAGL_	ENST00000585357.1_1_19:38782298-38782643:+|nuORF	102.7733458925114	0.06946074730680096	6				NaN	NaN	0	NaN	8422	3411	11828
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11853	31.643	NaN	18893	30	0	2007.1	0.214				-1	 	0	87	450.2346396190255	898.454726304851	2	450.2344970703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8437	3414	11852
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11854	31.647	NaN	7506.4	30	0	1810.2	0.106	+			25542	LPVAKDVSY	9	75	496.27704224471233	990.5395315562247	2	496.276611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LPVAKDVSY_	ENSG00000169764|ENST00000337130|UGP2;ENST00000475550.5_1_2:64069329-64114799:+|nuORF;nc|ENSG00000169764|Q16851-2|UGP2;UGP2|p.N469Kfs*16|1|0.3|ENSG00000169764|chr2:63890166-63890167|-/A|frameshift_variant;UGP2|p.N469Mfs*4|1|0.39|ENSG00000169764|chr2:63890167-63890167|A/-|frameshift_variant	63.53385203322761	0.18415635464017938	6				NaN	NaN	0	NaN	8438	3414	11852
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11855	31.649	NaN	5741.2	30	0	1930	0.106	+			48708	VTTPPPLV	8	61	412.250124702656	822.4856964721121	2	412.2498779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTTPPPLV_	ENSG00000167491|ENST00000683918|GATAD2A;GATAD2A|p.P366Tfs*74|1|0.48|ENSG00000167491|chr19:19498606-19498607|-/C|frameshift_variant;GATAD2A|p.R273Gfs*42|1|0.27|ENSG00000167491|chr19:19496107-19496107|C/-|frameshift_variant;nc|ENSG00000167491|Q86YP4-2|GATAD2A;nc|ENSG00000167491|Q86YP4|GATAD2A	35.200714571348534	0.6875396545722289	6				NaN	NaN	0	NaN	8439	3414	11852
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11856	31.651	NaN	1322	30	0	76.261	0.106			+	30557	QALQQYLAF	9	45	361.1941640523097	1080.5606627571292	3	361.19427490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QALQQYLAF_	REV__ENSG00000169676|ENST00000304374|DRD5	25.57405402267927	0.5642445186134241	6				NaN	NaN	0	NaN	8440	3414	11852
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11857	31.652	NaN	5383.5	30	0	480.12	0.106	+			47942	VSMDYAISK	9	78	507.2521625609969	1012.4897721887938	2	507.2523193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSMDYAISK_	ENSG00000196453|ENST00000247930|ZNF777;ZNF777|p.P504Rfs*5|1|0.44|ENSG00000196453|chr7:149432761-149432761|G/-|frameshift_variant	47.95952297671804	0.32689736945648856	6				NaN	NaN	0	NaN	8441	3414	11852
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11858	31.654	NaN	2111.5	30	0	377.57	0.035			+	41822	SVSTCSKPL	9	61	489.74838251875815	977.4822121043163	2	489.7483215332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_SVSTC(Carbamidomethyl (C))SKPL_	REV__CEP350|p.I2751Nfs*29|1|0.24|ENSG00000135837|chr1:180094350-180094351|-/A|frameshift_variant;REV__CEP350|p.N2889Ifs*10|1|0.38|ENSG00000135837|chr1:180095671-180095671|A/-|frameshift_variant;REV__CEP350|p.R2078Gfs*6|1|0.43|ENSG00000135837|chr1:180084119-180084119|A/-|frameshift_variant;REV__CEP350|p.Y2613Mfs*8|1|0.07|ENSG00000135837|chr1:180093938-180093938|T/-|frameshift_variant;REV__ENSG00000135837|ENST00000367607|CEP350	71.29570347882199	0.13518600952103718	6				NaN	NaN	0	NaN	8442	3414	11852
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11859	31.655	NaN	3091.2	30	0	218.78	0.141	+			27597	MPMVTDNKM	9	63	533.7401683506503	1065.4657837681004	2	533.7402954101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MPMVTDNKM_	ENSG00000175054|ENST00000350721|ATR;nc|ENSG00000175054|Q13535-2|ATR;nc|ENSG00000175054|Q13535-3|ATR	79.71258880314673	0.09879134589249085	6				NaN	NaN	0	NaN	8443	3414	11852
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11877	31.694	NaN	38743	30	0	8454	0.214	+			18815	ITVGDIGPK	9	88	450.26347785618276	898.5124027791655	2	450.2633361816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ITVGDIGPK_	ACOX1|p.N501Tfs*6|1|0.47|ENSG00000161533|chr17:75949577-75949577|T/-|frameshift_variant;ENSG00000161533|ENST00000293217|ACOX1;nc|ENSG00000161533|Q15067-3|ACOX1;nc|ENSG00000161533|Q15067|ACOX1	109.47833844074708	0.029530294723441826	6				NaN	NaN	0	NaN	8458	3417	11876
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11878	31.698	NaN	4421.5	30	0	1219.7	0.106			+	14914	GTLVNIPK	8	57	421.2606848030823	840.5068166729646	2	421.2605895996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTLVNIPK_	REV__EDRF1|p.L658Ffs*26|1|0.2|ENSG00000107938|chr10:125738432-125738433|-/T|frameshift_variant;REV__ENSG00000107938|ENST00000356792|EDRF1;REV__ENST00000481600.5_1_10:127417653-127452038:+|nuORF;REV__ENST00000525091.5_1_10:127408310-127436620:+|nuORF;REV__nc|ENSG00000107938|Q3B7T1-3|EDRF1;REV__nc|ENSG00000107938|Q3B7T1-4|EDRF1;REV__nc|ENSG00000107938|Q3B7T1-5|EDRF1	55.50420428727701	0.5462892107279674	6				NaN	NaN	0	NaN	8459	3417	11876
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11879	31.7	NaN	5154.1	30	0	488.57	0.106	+			24425	LGASLKDEI	9	79	473.2664399841034	944.5183270350068	2	473.26617431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LGASLKDEI_	ENST00000443417.1_1_9:102879039-102879699:-|nuORF	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	8460	3417	11876
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11880	31.701	NaN	2502.4	30	0	302.88	0.106	+			34719	RVWDVESGSLK	11	68	638.3386765927668	1274.6628002523335	2	638.3385620117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RVWDVESGSLK_	ENSG00000138442|ENST00000261015|WDR12;ENST00000463824.1_1_2:203749090-203749249:-|nuORF;ENST00000477727.5_1_2:203748882-203757354:-|nuORF	79.07001860377117	0.16012584326255155	6				NaN	NaN	0	NaN	8461	3417	11876
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11881	31.703	NaN	1881	30	0	182.02	0.106	+			26593	LTVNAVLISI	10	67	521.8291139085769	1041.6436748839537	2	521.82958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LTVNAVLISI_	ENSG00000134313|ENST00000256707|KIDINS220;ENST00000488729.5_1_2:8870852-8965899:-|nuORF;KIDINS220|p.K1581Rfs*8|1|0.28|ENSG00000134313|chr2:8731294-8731294|T/-|frameshift_variant;KIDINS220|p.P1081Rfs*48|1|0.22|ENSG00000134313|chr2:8750284-8750284|G/-|frameshift_variant;KIDINS220|p.R1551Efs*38|1|0.08|ENSG00000134313|chr2:8731386-8731386|C/-|frameshift_variant;nc|ENSG00000134313|Q9ULH0-2|KIDINS220;nc|ENSG00000134313|Q9ULH0-3|KIDINS220;nc|ENSG00000134313|Q9ULH0-4|KIDINS220	54.722347961057174	0.4138398245444204	6				NaN	NaN	0	NaN	8462	3417	11876
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11882	31.705	NaN	2557.8	30	0	376.91	0.035	+			18722	ITGNMGLAMK	10	70	518.2698516759957	1034.5251504187913	2	518.2705688476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ITGNMGLAMK_	ENSG00000116171|ENST00000371514|SCP2;ENST00000488965.1_1_1:53516256-53516373:+|nuORF;nc|ENSG00000116171|P22307-2|SCP2;nc|ENSG00000116171|P22307-4|SCP2;nc|ENSG00000116171|P22307-6|SCP2;nc|ENSG00000116171|P22307-7|SCP2;nc|ENSG00000116171|P22307-8|SCP2	43.41853373365257	0.517645004642704	6				NaN	NaN	0	NaN	8463	3417	11876
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11883	31.706	NaN	2287.4	30	0	374.55	0.14			+	41666	SVRNGWQY	8	64	505.2454453331524	1008.4763377331049	2	505.2454833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVRNGWQY_	REV__ENST00000495184.5_1_9:286487-368312:+|nuORF	47.91560031466742	0.6071945918984287	6				NaN	NaN	0	NaN	8464	3417	11876
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11901	31.745	NaN	11287	30	0	3130.4	0.214	+			50041	WEEAAHDL	8	73	485.71696177960314	969.4193706260063	2	485.71673583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WEEAAHDL_	ENSG00000100380|ENST00000216218|ST13;nc|ENSG00000212789|Q8NFI4|ST13P5;nc|ENSG00000232150|Q8IZP2|ST13P4;ST13|p.G306Efs*50|1|0.18|ENSG00000100380|chr22:40827160-40827160|C/-|frameshift_variant	71.29570347882199	0.39610197767395533	6				NaN	NaN	0	NaN	8479	3420	11900
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11902	31.748	NaN	15631	30	0	9251.7	0.106	+			198	AALDWVTKK	9	45	344.5342974219611	1030.5810628660834	3	344.5342102050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AALDWVTKK_	ENSG00000227057|ENST00000374617|WDR46;ENST00000488944.5_1_6:33255341-33255794:-|nuORF	54.776311868738084	0.25715957988447635	6				NaN	NaN	0	NaN	8480	3420	11900
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11903	31.751	NaN	4737.3	30	0	598.34	0.106	+			444	AAVGKSSFL	9	58	440.25054454619294	878.4865361591859	2	440.24993896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AAVGKSSFL_	ENSG00000165105|ENST00000376447|RASEF	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	8481	3420	11900
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11904	31.752	NaN	5891.3	30	0	878.54	0.106	+			27562	MPEPDAQRF	9	74	545.753072865298	1089.491592797396	2	545.7536010742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MPEPDAQRF_	CHEK1|p.I234Nfs*11|1|0.24|ENSG00000149554|chr11:125635508-125635509|-/A|frameshift_variant;ENSG00000149554|ENST00000438015|CHEK1;nc|ENSG00000149554|O14757-2|CHEK1;nc|ENSG00000149554|O14757-3|CHEK1	98.62937762414208	0.04060045538121712	6				NaN	NaN	0	NaN	8482	3420	11900
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11905	31.754	NaN	5837.3	30	0	1921.4	0.106	+			32313	QTQSIYIPR	9	68	553.3036325854108	1104.5927122376215	2	553.3040161132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QTQSIYIPR_	ENSG00000114573|ENST00000273398|ATP6V1A;nc|ENSG00000114573|P38606-2|ATP6V1A	68.62578634547417	0.14673074753754126	6				NaN	NaN	0	NaN	8483	3420	11900
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11906	31.756	NaN	3628.6	30	0	267.64	0.106			+	0	AAAAAAAYYP	10	72	470.2337900776576	938.4530272221152	2	470.2334289550781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AAAAAAAYYP_	REV__ENSG00000128713|ENST00000249504|HOXD11	54.76467175910256	0.41345489472286195	6				NaN	NaN	0	NaN	8484	3420	11900
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11907	31.758	NaN	8180.1	30	0	1746.6	0.038			+	38369	SRRSNSVIGPE	11	59	401.21575578120456	NaN	0	401.2159729003906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SRRSNSVIGPE_	REV__ENST00000517550.1_1_7:27161590-27163258:+|nuORF	49.536043120802724	0.3186510426945788	6				NaN	NaN	0	NaN	8485	3420	11900
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11925	31.796	NaN	5194.8	30	0	3735.2	0.214				-1	 	0	43	350.2068028244196	698.3990527156392	2	350.20672607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8500	3423	11924
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11926	31.8	NaN	10215	30	0	1549	0.106	+			46550	VFHDQLHTF	9	56	381.8576926909894	1142.5512486731682	3	381.85748291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VFHDQLHTF_	ENSG00000100784|ENST00000614987|RPS6KA5;nc|ENSG00000100784|O75582-2|RPS6KA5;nc|ENSG00000100784|O75582-3|RPS6KA5	74.25504064058377	0.12238981753128622	6				NaN	NaN	0	NaN	8501	3423	11924
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11927	31.802	NaN	3697.3	30	0	867.32	0.106	+			46551	VFHDQLHTF	9	63	572.2828538439132	1142.5511547546264	2	572.282958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VFHDQLHTF_	ENSG00000100784|ENST00000614987|RPS6KA5;nc|ENSG00000100784|O75582-2|RPS6KA5;nc|ENSG00000100784|O75582-3|RPS6KA5	72.87924865735499	0.12833875048249987	6				NaN	NaN	0	NaN	8502	3423	11924
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11928	31.804	NaN	2603	30	0	228.26	0.106	+			37916	SPDEKSVITY	10	70	569.7851584212721	1137.555763909344	2	569.7855834960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SPDEKSVITY_	DST|p.K5076Nfs*24|1|0.31|ENSG00000151914|chr6:56472218-56472218|T/-|frameshift_variant;DST|p.L1539Ffs*11|1|0.39|ENSG00000151914|chr6:56611525-56611526|-/A|frameshift_variant;DST|p.N1220Tfs*9|1|0.23|ENSG00000151914|chr6:56630354-56630354|T/-|frameshift_variant;DST|p.T4428Nfs*23|1|0.12|ENSG00000151914|chr6:56497896-56497897|-/T|frameshift_variant;ENSG00000127603|ENST00000564288|MACF1;ENSG00000151914|ENST00000680361|DST;ENST00000485063.1_1_1:39748843-39749872:+|nuORF;ENST00000521104.1_1_6:56504020-56557947:-|nuORF;ENST00000523967.5_1_6:56504020-56716372:-|nuORF;MACF1|p.A5223Lfs*8|1|0.21|ENSG00000127603|chr1:39388486-39388486|G/-|frameshift_variant;MACF1|p.N4824Kfs*19|1|0.33|ENSG00000127603|chr1:39387292-39387293|-/A|frameshift_variant;MACF1|p.P924Hfs*52|1|0.23|ENSG00000127603|chr1:39303040-39303040|C/-|frameshift_variant;MACF1|p.S2157Ffs*3|1|0.37|ENSG00000127603|chr1:39333036-39333037|-/T|frameshift_variant;MACF1|p.T4896Lfs*29|1|0.27|ENSG00000127603|chr1:39387507-39387507|A/-|frameshift_variant;nc|ENSG00000127603|Q9UPN3-2|MACF1;nc|ENSG00000127603|Q9UPN3-3|MACF1;nc|ENSG00000127603|Q9UPN3-4|MACF1;nc|ENSG00000127603|Q9UPN3|MACF1;nc|ENSG00000151914|Q03001-13|DST;nc|ENSG00000151914|Q03001-14|DST;nc|ENSG00000151914|Q03001|DST	53.08895987439943	0.42869529153390606	6				NaN	NaN	0	NaN	8503	3423	11924
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11929	31.806	NaN	2162.9	30	0	240.83	0.106	+			13210	GIFHNEDL	8	55	472.7272577087767	943.4399624843534	2	472.72723388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GIFHNEDL_	ENSG00000198626|ENST00000366574|RYR2;nc|ENSG00000198626|Q92736-2|RYR2;RYR2|p.A2213Lfs*22|1|0.28|ENSG00000198626|chr1:237633654-237633654|A/-|frameshift_variant;RYR2|p.D3347Tfs*10|1|0.36|ENSG00000198626|chr1:237708990-237708990|G/-|frameshift_variant;RYR2|p.I1830T|1|0.33|ENSG00000198626|chr1:237614617-237614617|T/C|missense_variant;RYR2|p.L2146Gfs*3|1|0.05|ENSG00000198626|chr1:237628075-237628076|-/GGTCT|frameshift_variant;RYR2|p.S4583Lfs*11|1|0.45|ENSG00000198626|chr1:237792286-237792286|T/-|frameshift_variant	33.51558372728122	0.7005509609380386	6				NaN	NaN	0	NaN	8504	3423	11924
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11930	31.807	NaN	1997.9	30	0	433.11	0.038			+	26283	LSTRTSPILPA	11	41	385.8959310346742	NaN	0	385.8958740234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSTRTSPILPA_	REV__ENST00000561040.1_1_19:47919951-47920188:-|nuORF;REV__ENST00000561204.5_1_19:47919910-47920188:-|nuORF	26.063383197487333	0.44926255568796863	6				NaN	NaN	0	NaN	8505	3423	11924
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11948	31.845	NaN	50181	30	0	15790	0.214	+			48966	VVGAVVFQK	9	77	473.7894950506091	945.5644371680182	2	473.78936767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVGAVVFQK_	ENSG00000169223|ENST00000303127|LMAN2;ENST00000504071.1_1_5:176759089-176761465:-|nuORF;ENST00000515209.5_1_5:176759089-176761331:-|nuORF	143.01937276914788	0.00906355689373299	6				NaN	NaN	0	NaN	8520	3426	11947
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11949	31.849	NaN	44951	30	0	4959.6	0.106	+			40656	SVAQVVLSR	9	88	479.7877202736373	957.5608876140747	2	479.7874450683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVAQVVLSR_	ENSG00000165272|ENST00000297991|AQP3;ENST00000463983.5_1_9:33443205-33447528:-|nuORF;ENST00000493581.1_1_9:33443725-33447528:-|nuORF;nc|ENSG00000165272|Q92482-2|AQP3	169.6522961985778	0.0028262690464207238	6				NaN	NaN	0	NaN	8521	3426	11947
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11950	31.851	NaN	18463	30	0	3032.5	0.106			+	29792	PIQSHLPLIQ	10	70	382.5609273316109	1144.6609525950328	3	382.5606994628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PIQSHLPLIQ_	REV__DHX9|p.L1065Cfs*20|1|0.41|ENSG00000135829|chr1:182883563-182883563|C/-|frameshift_variant;REV__ENSG00000135829|ENST00000367549|DHX9;REV__ENST00000436565.2_1_13:77560670-77561054:+|nuORF;REV__ENST00000490519.1_1_1:182845328-182845691:+|nuORF	38.753607047826485	0.5606299674732264	6				NaN	NaN	0	NaN	8522	3426	11947
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11951	31.852	NaN	5411.6	30	0	584.58	0.106	+			36931	SILEKGFIAK	10	69	553.3347740494263	1104.6549951656525	2	553.3352661132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SILEKGFIAK_	ENSG00000137601|ENST00000507142|NEK1;ENST00000509912.5_1_4:170476851-170520268:-|nuORF;nc|ENSG00000137601|Q96PY6-2|NEK1;nc|ENSG00000137601|Q96PY6-4|NEK1;nc|ENSG00000137601|Q96PY6-5|NEK1;nc|ENSG00000137601|Q96PY6-6|NEK1;nc|ENSG00000137601|Q96PY6|NEK1;NEK1|p.I605Sfs*4|1|0.42|ENSG00000137601|chr4:169507729-169507729|T/-|frameshift_variant;NEK1|p.K337Nfs*13|1|0.37|ENSG00000137601|chr4:169576937-169576937|T/-|frameshift_variant;NEK1|p.V637Cfs*34|1|0.31|ENSG00000137601|chr4:169507052-169507052|T/-|frameshift_variant	91.26522074875469	0.12383023862516404	6				NaN	NaN	0	NaN	8523	3426	11947
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11952	31.854	NaN	7897.8	30	0	1415.3	0.106	+			50837	YETKTALL	8	72	469.76336361010306	937.5121742870061	2	469.76324462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YETKTALL_	ENSG00000100242|ENST00000689035|SUN2;nc|ENSG00000100242|Q9UH99-2|SUN2;nc|ENSG00000100242|Q9UH99-3|SUN2	96.19043198914106	0.25873003980794995	6				NaN	NaN	0	NaN	8524	3426	11947
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11953	31.856	NaN	3845.3	30	0	1383.2	0.033	+			36713	SGSTILALK	9	58	445.27144295738765	888.5283329815753	2	445.2713317871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SGSTILALK_	ENSG00000145861|ENST00000652664|C1QTNF2	51.19269402634007	0.2889735674168909	6				NaN	NaN	0	NaN	8525	3426	11947
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11954	31.857	NaN	2636.1	30	0	344.56	0.142	+			34153	RSYMSFSMK	9	65	568.7650525768604	1135.5155522205207	2	568.7655639648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RSYMSFSMK_	ENSG00000198643|ENST00000358781|FAM3D;FAM3D|p.G139Vfs*16|1|0.28|ENSG00000198643|chr3:58637183-58637183|C/-|frameshift_variant	76.16968421966216	0.11411088698345859	6				NaN	NaN	0	NaN	8526	3426	11947
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11972	31.895	NaN	13453	30	0	3410.3	0.214	+			2248	ALTLSTVKY	9	67	498.29242535662087	994.5702977800418	2	498.29193115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ALTLSTVKY_	ENSG00000110076|ENST00000265459|NRXN2;ENST00000466324.1_1_11:64444212-64481216:-|nuORF;nc|ENSG00000110076|Q9P2S2-2|NRXN2;NRXN2|p.T1508Rfs*58|2|0.16|ENSG00000110076|chr11:64607814-64607814|G/-|frameshift_variant	42.86426827375447	0.38666266728046506	6				NaN	NaN	0	NaN	8541	3429	11971
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11973	31.899	NaN	10906	30	0	6119.8	0.106				-1	SLGNLRRHM	9	52	367.1975397997119	1098.5707899993356	3	367.19757080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_SLGNLRRHM(Oxidation (M))_	ENSG00000197933|ENST00000341191|ZNF823	25.57405402267927	0.5642445186134241	6				NaN	NaN	0	NaN	8542	3429	11971
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11974	31.901	NaN	4436.8	30	0	681.77	0.106	+			3467	ASSALFMAK	9	62	463.244237079157	924.473921225114	2	463.24383544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASSALFMAK_	ENSG00000125651|ENST00000394456|GTF2F1;GTF2F1|p.E356G|1|0.16|ENSG00000125651|chr19:6381147-6381147|T/C|missense_variant	39.252832667884924	0.4290233611298554	6				NaN	NaN	0	NaN	8543	3429	11971
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11975	31.902	NaN	5641	30	0	632.44	0.106	+			5933	AVLHTVLLH	9	67	501.8087022194216	1001.6028515056432	2	501.80859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVLHTVLLH_	ENSG00000123395|ENST00000336854|ATG101	68.484700416344	0.1473408039581241	6				NaN	NaN	0	NaN	8544	3429	11971
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11976	31.904	NaN	11894	30	0	1513	0.106	+			12670	GEITGEVHM	9	64	486.7263601573883	971.4381673815766	2	486.72601318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GEITGEVHM_	ENSG00000136068|ENST00000295956|FLNB;ENST00000481470.5_1_3:58118395-58154450:+|nuORF;nc|ENSG00000136068|O75369-2|FLNB;nc|ENSG00000136068|O75369-3|FLNB;nc|ENSG00000136068|O75369-4|FLNB;nc|ENSG00000136068|O75369-5|FLNB;nc|ENSG00000136068|O75369-6|FLNB;nc|ENSG00000136068|O75369-7|FLNB;nc|ENSG00000136068|O75369-8|FLNB;nc|ENSG00000136068|O75369-9|FLNB	96.19043198914106	0.047412499214244314	6				NaN	NaN	0	NaN	8545	3429	11971
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11977	31.906	NaN	4455.5	30	0	468.62	0.033	+			48253	VTDGAILGK	9	65	437.2554907205845	872.496428507969	2	437.2553405761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTDGAILGK_	ENSG00000055609|ENST00000262189|KMT2C;KMT2C|p.F4496Lfs*21|3|0.28|ENSG00000055609|chr7:152148439-152148439|A/-|frameshift_variant;KMT2C|p.I4868Lfs*37|1|0.28|ENSG00000055609|chr7:152138837-152138837|T/-|frameshift_variant;KMT2C|p.K2867Dfs*7|1|0.28|ENSG00000055609|chr7:152176853-152176854|TT/-|frameshift_variant;KMT2C|p.P2292Hfs*13|1|0.25|ENSG00000055609|chr7:152180985-152180985|G/-|frameshift_variant;KMT2C|p.S2816Ifs*6|1|0.44|ENSG00000055609|chr7:152177007-152177008|-/T|frameshift_variant;KMT2C|p.T3715Qfs*4|1|0.34|ENSG00000055609|chr7:152162434-152162434|T/-|frameshift_variant;nc|ENSG00000055609|Q8NEZ4-2|KMT2C;nc|ENSG00000055609|Q8NEZ4-3|KMT2C	60.11826168202944	0.21262886028301267	6				NaN	NaN	0	NaN	8546	3429	11971
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11978	31.907	NaN	2543.1	30	0	705.17	0.143	+			33302	RGQVRGGRCLP	11	45	400.2256934484932	1197.6552509456797	3	400.2253723144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RGQVRGGRCLP_	ENST00000593422.5_1_19:49977845-49979877:+|nuORF	20.030474535948922	0.7766990143561855	6				NaN	NaN	0	NaN	8547	3429	11971
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11996	31.945	NaN	46861	30	0	11090	0.214	+			31766	QPFYHDDSY	9	77	586.2385722811009	1170.4625916290017	2	586.238525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QPFYHDDSY_	ENSG00000171223|ENST00000302754|JUNB;JUNB|p.G115Vfs*35|2|0.33|ENSG00000171223|chr19:12792111-12792111|G/-|frameshift_variant;JUNB|p.G126Afs*24|1|0.32|ENSG00000171223|chr19:12792144-12792144|G/-|frameshift_variant;JUNB|p.S28Yfs*7|1|0.17|ENSG00000171223|chr19:12791850-12791853|CTCT/-|frameshift_variant	111.64827973302667	0.027316110422332632	6				NaN	NaN	0	NaN	8562	3432	11995
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11997	31.949	NaN	11636	30	0	1358.4	0.106	+			12671	GEITGEVHM	9	77	486.7263601573883	971.4381673815766	2	486.72607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEITGEVHM_	ENSG00000136068|ENST00000295956|FLNB;ENST00000481470.5_1_3:58118395-58154450:+|nuORF;nc|ENSG00000136068|O75369-2|FLNB;nc|ENSG00000136068|O75369-3|FLNB;nc|ENSG00000136068|O75369-4|FLNB;nc|ENSG00000136068|O75369-5|FLNB;nc|ENSG00000136068|O75369-6|FLNB;nc|ENSG00000136068|O75369-7|FLNB;nc|ENSG00000136068|O75369-8|FLNB;nc|ENSG00000136068|O75369-9|FLNB	108.08749611321984	0.03094949498378333	6				NaN	NaN	0	NaN	8563	3432	11995
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11998	31.951	NaN	5109.3	30	0	965.37	0.106			+	20504	KFESVAAAI	9	62	468.2635226610227	934.5124923888454	2	468.26318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KFESVAAAI_	REV__tr|U7T136|U7T136_FUSNULargeribosomalsubunitproteinuL1OS=FusobacteriumnucleatumCTI-5OX=1316586GN=rplAPE=3SV=1	82.30502934623384	0.08758161712619916	6				NaN	NaN	0	NaN	8564	3432	11995
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11999	31.953	NaN	6937.2	30	0	3150.2	0.106			+	11139	FGFYFTMPM	9	61	570.7494704711003	1139.4843880090004	2	570.7496948242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FGFYFTMPM_	REV__ENSG00000136868|ENST00000374212|SLC31A1;REV__ENST00000451221.1_1_3:172321509-172321743:-|nuORF	39.252832667884924	0.4290233611298554	6				NaN	NaN	0	NaN	8565	3432	11995
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12000	31.954	NaN	5203.7	30	0	513.16	0.106	+			45484	TYDKGYQF	8	76	511.23517129282925	1020.4557896524585	2	511.2351989746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TYDKGYQF_	ENSG00000139197|ENST00000675855|PEX5;nc|ENSG00000139197|P50542-2|PEX5;nc|ENSG00000139197|P50542-3|PEX5;nc|ENSG00000139197|P50542-4|PEX5	62.107414245175825	0.4809183816468817	6				NaN	NaN	0	NaN	8566	3432	11995
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12001	31.956	NaN	5829.5	30	0	1451.3	0.037			+	7984	DSWKVNPRE	9	62	565.7853247001569	NaN	0	565.7850952148438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DSWKVNPRE_	REV__ENSG00000119541|ENST00000238497|VPS4B;REV__ENST00000588059.5_1_18:61064418-61077532:-|nuORF;REV__ENST00000589604.5_1_18:61064221-61077532:-|nuORF;REV__ENST00000591475.5_1_18:61064221-61089576:-|nuORF	56.72105179125745	0.16330365735109603	6				NaN	NaN	0	NaN	8567	3432	11995
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12002	31.957	NaN	2283.1	30	0	1030.6	0.145			+	26491	LTLTWSRLV	9	37	363.5534722882131	1087.6385874648392	3	363.553466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LTLTWSRLV_	REV__ENST00000262039.8_1_18:39620667-39629506:+|nuORF	12.959181472943097	0.6112419832031292	6				NaN	NaN	0	NaN	8568	3432	11995
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12019	31.993	NaN	7546.6	30	0	2623.3	0.215			+	-1	VSADTRAMLST	11	51	389.85870763299187	NaN	0	389.85858154296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_VSADTRAM(Oxidation (M))LST_	REV__COL7A1|p.E2208Sfs*12|1|0.12|ENSG00000114270|chr3:48573345-48573345|C/-|frameshift_variant;REV__COL7A1|p.G2177Wfs*113|1|0.1|ENSG00000114270|chr3:48573864-48573865|-/G|frameshift_variant;REV__COL7A1|p.P1441Lfs*269|1|0.36|ENSG00000114270|chr3:48583737-48583737|G/-|frameshift_variant;REV__COL7A1|p.P1754Qfs*87|1|0.6|ENSG00000114270|chr3:48579490-48579490|G/-|frameshift_variant;REV__COL7A1|p.P1990Qfs*15|1|0.14|ENSG00000114270|chr3:48575636-48575636|G/-|frameshift_variant;REV__COL7A1|p.P2029Lfs*177|2|0.43|ENSG00000114270|chr3:48575438-48575438|G/-|frameshift_variant;REV__COL7A1|p.P2298Lfs*90|1|0.18|ENSG00000114270|chr3:48572678-48572678|G/-|frameshift_variant;REV__COL7A1|p.S2715Vfs*71|1|0.4|ENSG00000114270|chr3:48566991-48566991|G/-|frameshift_variant;REV__COL7A1|p.W435*|1|0.38|ENSG00000114270|chr3:48591950-48591950|C/-|frameshift_variant;REV__ENSG00000114270|ENST00000681320|COL7A1;REV__nc|ENSG00000114270|Q02388-2|COL7A1	30.568863376406313	0.42918353898720446	6				NaN	NaN	0	NaN	8582	3435	12018
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12020	31.997	NaN	5630.1	30	0	641.42	0.106	+			687	AEALAAGADT	10	72	445.2168985368991	888.4192441405983	2	445.2170715332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEALAAGADT_	UGGT1|p.I848T|1|0.29|ENSG00000136731|chr2:128159701-128159701|T/C|missense_variant	47.657333605630114	0.47858658696240314	6				NaN	NaN	0	NaN	8583	3435	12018
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12021	31.999	NaN	4161.4	30	0	1122.9	0.106	+			49507	VWESLQGTL	9	71	516.7709386889535	NaN	0	516.7704467773438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VWESLQGTL_	ENST00000292530.10_1_19:14829575-14829656:+|nuORF	51.33545320467046	0.19748963086191895	6				NaN	NaN	0	NaN	8584	3435	12018
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12022	32.001	NaN	2579.4	30	0	521.95	0.106	+			49000	VVGLPNVGK	9	50	441.7741772845504	881.5338016359008	2	441.7740783691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVGLPNVGK_	ENSG00000130119|ENST00000360845|GNL3L	42.47446043378293	0.39123495718708534	6				NaN	NaN	0	NaN	8585	3435	12018
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12023	32.002	NaN	2495.5	30	0	295.12	0.106				-1	ANCLALLAR	9	59	501.28016207844155	1000.5457712236831	2	501.2801208496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_ANC(Carbamidomethyl (C))LALLAR_	ENST00000376440.6_1_13:100038329-100038548:+|nuORF	34.172542307311794	0.4838870758800184	6				NaN	NaN	0	NaN	8586	3435	12018
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12024	32.004	NaN	1679.2	30	0	253.63	0.036	+			39454	STEPIYVYK	9	56	550.2876870855126	1098.5608212378252	2	550.2885131835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STEPIYVYK_	ENSG00000179889|ENST00000396410|PDXDC1;nc|ENSG00000179889|Q6P996-3|PDXDC1;nc|ENSG00000179889|Q6P996-4|PDXDC1;nc|ENSG00000179889|Q6P996-5|PDXDC1;PDXDC1|p.P706Tfs*3|1|0.06|ENSG00000179889|chr16:15036023-15036024|-/A|frameshift_variant	42.396135135203025	0.392153681582562	6				NaN	NaN	0	NaN	8587	3435	12018
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12025	32.005	NaN	4329.7	30	0	867.88	0.14	+			38142	SQAEALLMK	9	68	495.768607089849	989.522661246498	2	495.7688293457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SQAEALLMK_	ENSG00000169519|ENST00000407364|METTL15;nc|ENSG00000169519|A6NJ78-2|METTL15;nc|ENSG00000169519|A6NJ78-4|METTL15;nc|ENSG00000174912|P0C7V9|METTL15P1	89.02883481214508	0.06760336634167786	6				NaN	NaN	0	NaN	8588	3435	12018
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12043	32.044	NaN	26060	30	0	13430	0.214	+			38079	SPSSVSNTF	9	68	463.2166653900667	924.4187778469334	2	463.2165222167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SPSSVSNTF_	ENSG00000145113|ENST00000463781|MUC4;MUC4|p.L3985Ffs*274|1|0.3|ENSG00000145113|chr3:195779627-195779627|G/-|frameshift_variant;MUC4|p.N4902Tfs*8|1|0.37|ENSG00000145113|chr3:195761027-195761027|T/-|frameshift_variant;nc|ENSG00000145113|Q99102-10|MUC4;nc|ENSG00000145113|Q99102-11|MUC4;nc|ENSG00000145113|Q99102-15|MUC4;nc|ENSG00000145113|Q99102-16|MUC4;nc|ENSG00000145113|Q99102-17|MUC4;nc|ENSG00000145113|Q99102-2|MUC4;nc|ENSG00000145113|Q99102-3|MUC4;nc|ENSG00000145113|Q99102-5|MUC4;nc|ENSG00000145113|Q99102-7|MUC4;nc|ENSG00000145113|Q99102-8|MUC4;nc|ENSG00000145113|Q99102-9|MUC4	101.60071028292904	0.0375685401170269	6				NaN	NaN	0	NaN	8603	3438	12042
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12044	32.048	NaN	7235	30	0	1128.4	0.106	+			22845	KVIGIAIMK	9	66	486.8173540115668	971.6201550899336	2	486.8172912597656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVIGIAIMK_	ENSG00000138050|ENST00000505747|THUMPD2;ENST00000460072.5_1_2:39984490-39995716:-|nuORF;nc|ENSG00000138050|Q9BTF0-2|THUMPD2	93.19546047674547	0.05585629608842056	6				NaN	NaN	0	NaN	8604	3438	12042
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12045	32.05	NaN	11266	30	0	1561.4	0.106	+			23330	KYSLIKGNF	9	70	535.3057245988957	1068.5968962645914	2	535.305908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KYSLIKGNF_	ENSG00000143546|ENST00000368733|S100A8	120.8684288430529	0.02067403653475984	6				NaN	NaN	0	NaN	8605	3438	12042
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12046	32.052	NaN	11511	30	0	3489.3	0.106	+			11461	FNFVRRIFP	9	52	399.2291341136907	1194.665572941272	3	399.2287902832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FNFVRRIFP_	ENSG00000009694|ENST00000371130|TENM1;nc|ENSG00000009694|Q9UKZ4-2|TENM1;TENM1|p.L1382Ffs*3|1|0.63|ENSG00000009694|chrX:124422576-124422577|-/A|frameshift_variant;TENM1|p.M1863Wfs*25|1|0.38|ENSG00000009694|chrX:124392132-124392132|T/-|frameshift_variant	26.69291269510374	0.5537881896960711	6				NaN	NaN	0	NaN	8606	3438	12042
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12047	32.054	NaN	7399.9	30	0	1318.2	0.106	+			30227	PSSPASSQF	9	70	454.2111984204815	906.407843907763	2	454.2112731933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PSSPASSQF_	BRD8|p.P1065Lfs*29|1|0.14|ENSG00000112983|chr5:138149724-138149724|G/-|frameshift_variant;ENSG00000112983|ENST00000254900|BRD8;nc|ENSG00000112983|Q9H0E9-2|BRD8;nc|ENSG00000112983|Q9H0E9-3|BRD8;nc|ENSG00000112983|Q9H0E9-4|BRD8	71.29570347882199	0.13518600952103718	6				NaN	NaN	0	NaN	8607	3438	12042
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12048	32.055	NaN	5629.3	30	0	580.97	0.034	+			45898	VAPVPPGAAPA	11	71	473.77170172389737	945.5288505145948	2	473.7711181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VAPVPPGAAPA_	ENSG00000147689|ENST00000690554|FAM83A;nc|ENSG00000147689|Q86UY5-2|FAM83A;nc|ENSG00000147689|Q86UY5-3|FAM83A	50.0245360154114	0.4207767895280948	6				NaN	NaN	0	NaN	8608	3438	12042
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12049	32.056	NaN	4639.7	30	0	376.21	0.14	+			43948	TPDPSRSVF	9	70	503.2539714782425	1004.493390023285	2	503.2538146972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TPDPSRSVF_	ENSG00000141295|ENST00000290216|SCRN2;ENST00000581645.5_1_17:45915212-45916069:-|nuORF;nc|ENSG00000141295|Q96FV2-2|SCRN2	70.8162118820467	0.13725933411854815	6				NaN	NaN	0	NaN	8609	3438	12042
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12067	32.095	NaN	66081	30	0	12574	0.214				-1	 	0	84	386.20500799342517	1155.5931945804755	3	386.2047424316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8624	3441	12066
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12068	32.099	NaN	10174	30	0	3922.3	0.106	+			32369	QVAEIVSKY	9	69	518.7874647436416	1035.5603765540832	2	518.7872924804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QVAEIVSKY_	ENSG00000138448|ENST00000261023|ITGAV;ITGAV|p.G401Efs*13|1|0.4|ENSG00000138448|chr2:186646721-186646721|A/-|frameshift_variant;ITGAV|p.G561Dfs*2|4|0.23|ENSG00000138448|chr2:186656358-186656358|G/-|frameshift_variant;ITGAV|p.V806Hfs*11|1|0.07|ENSG00000138448|chr2:186667758-186667759|-/CATTTTCAAAA|frameshift_variant;nc|ENSG00000138448|P06756-2|ITGAV;nc|ENSG00000138448|P06756-3|ITGAV	131.61620852596164	0.014413238321579053	6				NaN	NaN	0	NaN	8625	3441	12066
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12069	32.101	NaN	5499.5	30	0	2212.8	0.106	+			16950	HPNSAIILHY	10	62	582.8116505559059	1163.6087481786117	2	582.811767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HPNSAIILHY_	CNOT1|p.Q904Sfs*9|4|0.29|ENSG00000125107|chr16:58555436-58555436|A/-|frameshift_variant;ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1;nc|ENSG00000125107|A5YKK6-4|CNOT1	95.81516180277367	0.09778090853194907	6				NaN	NaN	0	NaN	8626	3441	12066
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12070	32.103	NaN	2781.2	30	0	278.62	0.106	+			21073	KKLQIVQQE	9	65	557.3348418758784	1112.6551308185567	2	557.33544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KKLQIVQQE_	ENSG00000151065|ENST00000280665|DCP1B;ENST00000543381.5_1_12:2055374-2100299:-|nuORF;nc|ENSG00000151065|Q8IZD4-2|DCP1B	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	8627	3441	12066
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12071	32.105	NaN	10542	30	0	2139.1	0.106			+	26859	LVVVTVPDN	9	68	478.2761717410755	954.537790548951	2	478.2751770019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LVVVTVPDN_	REV__ENSG00000163563|ENST00000368141|MNDA	66.42927471994793	0.16001998865088202	6				NaN	NaN	0	NaN	8628	3441	12066
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12072	32.106	NaN	10300	30	0	1143.5	0.039	+			15537	GVDITKIQVKR	11	71	419.59440754333946	1255.7613932302183	3	419.59429931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GVDITKIQVKR_	ENSG00000058673|ENST00000367210|ZC3H11A;ENSG00000215817|ENST00000651890|ZC3H11B;nc|ENSG00000214558|P0DQW0|ZC3H11C	55.08391021199286	0.3673379875553588	6				NaN	NaN	0	NaN	8629	3441	12066
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12073	32.107	NaN	5286.8	30	0	1005.7	0.144	+			9510	EKVKELNLHE	10	56	413.56268223139455	1237.6662172943836	3	413.5626220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EKVKELNLHE_	ENSG00000101236|ENST00000358395|RNF24;nc|ENSG00000101236|Q9Y225-2|RNF24	29.550750289552195	0.6385079145554603	6				NaN	NaN	0	NaN	8630	3441	12066
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12091	32.147	NaN	19258	30	0	2768.4	0.214	+			26442	LTGPVMPVR	9	81	485.2811965762435	968.547840219287	2	485.28094482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LTGPVMPVR_	ENSG00000167526|ENST00000311528|RPL13;ENST00000399461.8_1_16:89627605-89629447:+|nuORF;ENST00000484610.5_1_16:89627907-89629447:+|nuORF;ENST00000570149.1_1_16:89628679-89629447:+|nuORF;nc|ENSG00000167526|P26373-2|RPL13	104.74654710444128	0.034358562718640136	6				NaN	NaN	0	NaN	8645	3444	12090
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12092	32.15	NaN	15645	30	0	3054.7	0.106			+	24990	LLEEHQLN	8	68	498.2618320212556	994.5091111093112	2	498.26129150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LLEEHQLN_	REV__ENSG00000179387|ENST00000323570|ELMOD2	82.30502934623384	0.30436709589983096	6				NaN	NaN	0	NaN	8646	3444	12090
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12093	32.152	NaN	81557	30	0	21304	0.106	+			13142	GGMSIFLKK	9	91	327.52466382831244	979.5521620851373	3	327.5246887207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GGMSIFLKK_	ENST00000264995.7_1_3:131220431-131221595:-|nuORF	51.33545320467046	0.2872990594074956	6				NaN	NaN	0	NaN	8647	3444	12090
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12094	32.154	NaN	2057.4	30	0	1430.3	0.106				-1	 	0	27	336.22749446880596	670.4404360044119	2	336.22735595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8648	3444	12090
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12095	32.156	NaN	5073.7	30	0	719.7	0.106	+			25433	LPNNAKLEM	9	67	515.273638260258	1028.532723587316	2	515.2734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LPNNAKLEM_	ENSG00000169696|ENST00000306739|ASPSCR1;nc|ENSG00000169696|Q9BZE9-2|ASPSCR1	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	8649	3444	12090
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12096	32.158	NaN	4932	30	0	344.95	0.033			+	18720	ITGLSLAKP	9	69	450.281596160075	898.5486393869501	2	450.28143310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ITGLSLAKP_	REV__MACF1|p.P924Hfs*52|1|0.23|ENSG00000127603|chr1:39303040-39303040|C/-|frameshift_variant	69.6276240434122	0.14239879520340665	6				NaN	NaN	0	NaN	8650	3444	12090
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12097	32.158	NaN	10716	30	0	2439.8	0.143	+			48454	VTLGEPKLLK	10	54	366.56922614367136	1096.685849031214	3	366.569091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VTLGEPKLLK_	ENSG00000198723|ENST00000361664|TEX45	36.446750945000026	0.5818864909973037	6				NaN	NaN	0	NaN	8651	3444	12090
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12115	32.196	NaN	8397.9	30	0	827.36	0.214	+			35713	SDLKVIVM	8	64	460.7596376711958	919.5047224091916	2	460.7596130371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_SDLKVIVM(Oxidation (M))_	ENSG00000109606|ENST00000336812|DHX15	99.37495909608758	0.2510236104623939	6				NaN	NaN	0	NaN	8666	3447	12114
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12116	32.2	NaN	5604.4	30	0	759.6	0.106	+			26858	LVVVSLSSIS	10	70	502.305250544875	1002.59594815655	2	502.3050231933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LVVVSLSSIS_	SLFN14|p.R556I|1|0.25|ENSG00000236320|chr17:35552967-35552967|C/A|missense_variant	45.9519527083369	0.4943008177357963	6				NaN	NaN	0	NaN	8667	3447	12114
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12117	32.202	NaN	7267.1	30	0	1756.5	0.106	+			49997	WANVGKSL	8	65	437.74283962250496	873.4711263118099	2	437.7424621582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_WANVGKSL_	ENSG00000109452|ENST00000262992|INPP4B;ENST00000512630.5_1_4:143007384-143094853:-|nuORF	101.60071028292904	0.24979566554663588	6				NaN	NaN	0	NaN	8668	3447	12114
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12118	32.204	NaN	9597.4	30	0	2810.2	0.106	+			16870	HPGLILKY	8	71	470.78449791276125	939.5544428923225	2	470.7840576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HPGLILKY_	ENSG00000099991|ENST00000263119|CABIN1;nc|ENSG00000099991|Q9Y6J0-2|CABIN1	65.89745868150666	0.44339748671293633	6				NaN	NaN	0	NaN	8669	3447	12114
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12119	32.206	NaN	12571	30	0	3381.8	0.106	+			3136	ASHPIWRKS	9	35	361.2015775592952	1080.5829032780855	3	361.2015380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASHPIWRKS_	ENST00000602384.5_3_1:19952901-19960990:+|nuORF	23.04248740728303	0.5879033540491928	6				NaN	NaN	0	NaN	8670	3447	12114
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12120	32.208	NaN	3205.7	30	0	459.67	0.036			+	19569	KCSLKKELY	9	70	556.3121115022645	1110.609670071329	2	556.31689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KCSLKKELY_	REV__ENSG00000162711|ENST00000336119|NLRP3;REV__ENST00000474792.1_1_1:247582090-247588902:+|nuORF;REV__nc|ENSG00000162711|Q96P20-2|NLRP3;REV__nc|ENSG00000162711|Q96P20-3|NLRP3;REV__nc|ENSG00000162711|Q96P20-4|NLRP3;REV__nc|ENSG00000162711|Q96P20-5|NLRP3;REV__nc|ENSG00000162711|Q96P20-6|NLRP3;REV__nc|ENSG00000162711|Q96P20|NLRP3;REV__NLRP3|p.S735Ffs*11|1|0.08|ENSG00000162711|chr1:247429627-247429628|-/T|frameshift_variant	63.53385203322761	0.18415635464017938	6				NaN	NaN	0	NaN	8671	3447	12114
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12121	32.208	NaN	2110.9	30	0	208.78	0.14			+	1470	AFIGLAFK	8	52	433.761906610483	865.509260287766	2	433.7618408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AFIGLAFK_	REV__ENSG00000140575|ENST00000268182|IQGAP1;REV__IQGAP1|p.N941Ifs*8|1|0.43|ENSG00000140575|chr15:90476693-90476693|A/-|frameshift_variant;REV__IQGAP1|p.S1529Afs*10|1|0.15|ENSG00000140575|chr15:90492665-90492665|A/-|frameshift_variant	28.2542754592877	0.7411748056684583	6				NaN	NaN	0	NaN	8672	3447	12114
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12139	32.246	NaN	15004	30	0	2649	0.214	+			27227	MEKIQPAL	8	77	465.2597561231122	928.5049593130244	2	465.25958251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MEKIQPAL_	ENSG00000123349|ENST00000334478|PFDN5;ENST00000552341.5_1_12:53691573-53693126:+|nuORF;ENST00000553171.1_1_12:53691669-53691972:+|nuORF;nc|ENSG00000123349|Q99471-3|PFDN5	116.90359126533652	0.23898233959989007	6				NaN	NaN	0	NaN	8687	3450	12138
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12140	32.25	NaN	8443.7	30	0	667.5	0.106	+			3782	ATAEVLNIGK	10	74	508.2924840576049	1014.5704151820098	2	508.29290771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATAEVLNIGK_	ENSG00000128050|ENST00000512576|PAICS;ENST00000510584.1_1_4:57302478-57308067:+|nuORF;nc|ENSG00000128050|P22234-2|PAICS	89.02883481214508	0.13663399911061233	6				NaN	NaN	0	NaN	8688	3450	12138
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12141	32.252	NaN	1876.8	30	0	385.74	0.106				-1	 	0	38	357.7305484525952	713.4465439719904	2	357.7304992675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8689	3450	12138
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12142	32.253	NaN	1884	30	0	208.85	0.106	+			45985	VATGDLAIR	9	55	458.26665288874125	914.5187528442825	2	458.266357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VATGDLAIR_	ENSG00000010292|ENST00000315579|NCAPD2	71.87747018426188	0.13267044672804276	6				NaN	NaN	0	NaN	8690	3450	12138
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12143	32.255	NaN	3359	30	0	349.82	0.106			+	27553	MPEGSHVYE	9	67	524.7239661646447	1047.4333793960893	2	524.724365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MPEGSHVYE_	REV__ENSG00000169093|ENST00000381317|ASMTL;REV__nc|ENSG00000292339|O95671-2|ASMTL;REV__nc|ENSG00000292339|O95671-3|ASMTL	34.172542307311794	0.4838870758800184	6				NaN	NaN	0	NaN	8691	3450	12138
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12144	32.257	NaN	2206.5	30	0	240.6	0.035	+			44063	TPSPEIVKY	9	62	517.2818697094028	1032.5491864856056	2	517.2819213867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TPSPEIVKY_	ENSG00000138035|ENST00000447944|PNPT1;ENST00000260604.8_1_2:55870335-55906871:-|nuORF	90.36981228632155	0.0638227155548745	6				NaN	NaN	0	NaN	8692	3450	12138
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12145	32.258	NaN	3451.5	30	0	467.65	0.138			+	17264	HYSGHHGL	8	55	454.2111984204815	906.407843907763	2	454.2108154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HYSGHHGL_	REV__ENSG00000141337|ENST00000621439|ARSG	44.53106598305862	0.628196326904373	6				NaN	NaN	0	NaN	8693	3450	12138
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12163	32.297	NaN	9530.5	30	0	898.66	0.214	+			16316	HEIEALKSF	9	79	537.2853200774067	1072.5560872216133	2	537.2852172851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HEIEALKSF_	ENSG00000078618|ENST00000352171|NRDC;nc|ENSG00000078618|O43847-2|NRDC	150.36159442982594	0.006784847064083231	6				NaN	NaN	0	NaN	8708	3453	12162
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12164	32.301	NaN	8000.7	30	0	1171.5	0.106	+			34122	RSSISPHVT	9	69	492.26527452014744	982.5159961070949	2	492.2613830566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RSSISPHVT_	ENST00000327026.7_1_17:80112845-80113109:-|nuORF	93.19546047674547	0.05585629608842056	6				NaN	NaN	0	NaN	8709	3453	12162
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12165	32.303	NaN	6094.5	30	0	711.64	0.106	+			27611	MPNSPAPHF	9	66	499.23198380554027	996.4494146778806	2	499.2313232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MPNSPAPHF_	ENSG00000112297|ENST00000633556|CRYBG1;nc|ENSG00000112297|Q9Y4K1-1|CRYBG1	58.22992032128504	0.22837015374068087	6				NaN	NaN	0	NaN	8710	3453	12162
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12166	32.305	NaN	3039.4	30	0	589.27	0.106	+			50527	YAPSGNYV	8	50	435.70332989014867	869.3921068470974	2	435.7029724121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YAPSGNYV_	ENSG00000078369|ENST00000378609|GNB1;ENSG00000114450|ENST00000232564|GNB4;nc|ENSG00000078369|P62873-2|GNB1	49.44154591367651	0.597725784090933	6				NaN	NaN	0	NaN	8711	3453	12162
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12167	32.306	NaN	2013.5	30	0	315.95	0.106	+			32359	QVAAMNYRL	9	56	533.2793907670563	1064.5442286009124	2	533.79296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QVAAMNYRL_	ENSG00000159496|ENST00000290691|RGL4;nc|ENSG00000159496|Q8IZJ4-2|RGL4	30.503639358989545	0.5181749237905803	6				NaN	NaN	0	NaN	8712	3453	12162
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12168	32.308	NaN	2211.9	30	0	697.25	0.037	+			31767	QPFYHDDSY	9	62	586.2385722811009	1170.4625916290017	2	586.2381591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QPFYHDDSY_	ENSG00000171223|ENST00000302754|JUNB;JUNB|p.G115Vfs*35|2|0.33|ENSG00000171223|chr19:12792111-12792111|G/-|frameshift_variant;JUNB|p.G126Afs*24|1|0.32|ENSG00000171223|chr19:12792144-12792144|G/-|frameshift_variant;JUNB|p.S28Yfs*7|1|0.17|ENSG00000171223|chr19:12791850-12791853|CTCT/-|frameshift_variant	37.15910966729921	0.4535818937225704	6				NaN	NaN	0	NaN	8713	3453	12162
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12169	32.309	NaN	1920.3	30	0	751.42	0.144	+			45860	VALQACKSRS	10	32	354.8625424042175	1061.5657978128525	3	354.8624267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VALQACKSRS_	nc|ENSG00000152818|P46939-2|UTRN	27.047317107675042	0.6589519614906109	6				NaN	NaN	0	NaN	8714	3453	12162
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12187	32.348	NaN	21867	30	0	3788.8	0.214	+			42861	TEGKTFQL	8	79	462.2454907387044	922.4764285442088	2	462.2452697753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEGKTFQL_	ENSG00000106105|ENST00000389266|GARS1;nc|ENSG00000106105|P41250-2|GARS1	75.04331003522576	0.3648751570195447	6				NaN	NaN	0	NaN	8729	3456	12186
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12188	32.352	NaN	21934	30	0	8338.9	0.106	+			38017	SPMESTQSL	9	63	490.22397147210967	978.4333900110194	2	490.2238464355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SPMESTQSL_	ENSG00000131242|ENST00000621161|RAB11FIP4;nc|ENSG00000131242|Q86YS3-2|RAB11FIP4	101.25262130126117	0.03792372629710479	6				NaN	NaN	0	NaN	8730	3456	12186
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12189	32.354	NaN	7865	30	0	2115.1	0.106	+			49001	VVGLPNVGK	9	60	441.7741772845504	881.5338016359008	2	441.77398681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVGLPNVGK_	ENSG00000130119|ENST00000360845|GNL3L	65.80317337860623	0.1652391959156183	6				NaN	NaN	0	NaN	8731	3456	12186
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12190	32.356	NaN	6026.1	30	0	842.4	0.106	+			23722	LAVEKAAEL	9	73	472.2764460782106	942.5383392232212	2	472.2762756347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LAVEKAAEL_	ENSG00000198554|ENST00000360586|WDHD1;nc|ENSG00000198554|O75717-2|WDHD1	76.16968421966216	0.11411088698345859	6				NaN	NaN	0	NaN	8732	3456	12186
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12191	32.358	NaN	9912.3	30	0	1817.9	0.106	+			4303	ATGIILPAR	9	74	456.28748478241647	910.560416631633	2	456.28729248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATGIILPAR_	ENSG00000163909|ENST00000372852|HEYL	76.7741389293348	0.11149722112137898	6				NaN	NaN	0	NaN	8733	3456	12186
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12192	32.359	NaN	8741.4	30	0	1853.2	0.035	+			51200	YPNSGSVSAY	10	67	522.7356821203579	1043.4568113075156	2	522.7360229492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YPNSGSVSAY_	ENSG00000136068|ENST00000295956|FLNB;ENST00000481470.5_1_3:58118395-58154450:+|nuORF;nc|ENSG00000136068|O75369-2|FLNB;nc|ENSG00000136068|O75369-3|FLNB;nc|ENSG00000136068|O75369-4|FLNB;nc|ENSG00000136068|O75369-5|FLNB;nc|ENSG00000136068|O75369-6|FLNB;nc|ENSG00000136068|O75369-7|FLNB;nc|ENSG00000136068|O75369-8|FLNB;nc|ENSG00000136068|O75369-9|FLNB	77.31757898189308	0.2175361111083648	6				NaN	NaN	0	NaN	8734	3456	12186
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12193	32.36	NaN	3692.1	30	0	685.04	0.139			+	45425	TVYAQTLR	8	53	476.26679545841955	950.5190379836391	2	476.2665710449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TVYAQTLR_	REV__SLC47A1|p.T156A|1|0.3|ENSG00000142494|chr17:19549645-19549645|A/G|missense_variant	42.396135135203025	0.6414440140393314	6				NaN	NaN	0	NaN	8735	3456	12186
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12211	32.397	NaN	431530	30	0	103320	0.126	+			6148	AVQEFGLAR	9	82	495.7726657583277	989.5307785834555	2	495.7724914550781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVQEFGLAR_	ENSG00000169230|ENST00000303204|PRELID1;nc|ENSG00000169230|Q9Y255-2|PRELID1	181.4070731898895	0.0011547877412507563	6				NaN	NaN	0	NaN	8750	3459	12210
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12212	32.399	NaN	6343	30	0	1030.7	0.106	+			32913	RDVIMREF	8	68	533.2793907670563	1064.5442286009124	2	533.2796630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RDVIMREF_	ENSG00000156976|ENST00000323963|EIF4A2;ENSG00000161960|ENST00000293831|EIF4A1;ENST00000461021.1_1_3:186505247-186505672:+|nuORF;ENST00000468362.5_1_3:186503755-186505556:+|nuORF;ENST00000485101.5_1_3:186505247-186505556:+|nuORF;ENST00000492144.5_1_3:186503809-186505672:+|nuORF;ENST00000494445.1_1_3:186505247-186506105:+|nuORF;ENST00000578324.5_1_17:7477602-7481249:+|nuORF;ENST00000581544.5_1_17:7477924-7481249:+|nuORF;ENST00000581621.1_1_17:7476159-7481249:+|nuORF;ENST00000581808.1_1_17:7481021-7481457:+|nuORF;ENST00000587313.1_1_18:12913551-12913704:+|nuORF;nc|ENSG00000156976|Q14240-2|EIF4A2;nc|ENSG00000161960|P60842-2|EIF4A1	65.46538089061403	0.44767499471257033	6				NaN	NaN	0	NaN	8751	3459	12210
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12213	32.401	NaN	6598.3	30	0	3049.3	0.106			+	34224	RTFGPAAT	8	48	410.71936065674646	819.4241683802929	2	410.7190856933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RTFGPAAT_	REV__DQX1|p.L497F|1|0.19|ENSG00000144045|chr2:74522586-74522586|G/A|missense_variant;REV__ENSG00000144045|ENST00000404568|DQX1;REV__nc|ENSG00000144045|Q8TE96-2|DQX1	49.44154591367651	0.597725784090933	6				NaN	NaN	0	NaN	8752	3459	12210
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12214	32.403	NaN	5218	30	0	1245	0.106	+			39349	STCIGILAK	9	69	481.77076213869356	961.5269713441871	2	481.7707214355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_STC(Carbamidomethyl (C))IGILAK_	EDC4|p.D801Mfs*15|1|0.26|ENSG00000038358|chr16:67880857-67880857|G/-|frameshift_variant;EDC4|p.Q792Sfs*24|1|0.37|ENSG00000038358|chr16:67880829-67880829|C/-|frameshift_variant;ENSG00000038358|ENST00000358933|EDC4;ENST00000536072.6_1_16:67909906-67914140:+|nuORF;ENST00000572221.5_1_16:67909733-67911757:+|nuORF	98.62937762414208	0.04060045538121712	6				NaN	NaN	0	NaN	8753	3459	12210
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12215	32.405	NaN	3653	30	0	705.8	0.106	+			40470	STVTPSSAL	9	56	431.72965692147966	861.4447609097593	2	431.7296142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STVTPSSAL_	ENSG00000117983|ENST00000529681|MUC5B;ENSG00000117983|ENST00000529681|MUC5B;ENSG00000117983|ENST00000529681|MUC5B;MUC5B|p.E2929Gfs*98|1|0.13|ENSG00000117983|chr11:1245660-1245661|-/GC|frameshift_variant;MUC5B|p.P3417Qfs*3|1|0.41|ENSG00000117983|chr11:1247125-1247125|C/-|frameshift_variant;MUC5B|p.S3126Pfs*13|1|0.37|ENSG00000117983|chr11:1246251-1246251|C/-|frameshift_variant;MUC5B|p.S3878Pfs*27|1|0.13|ENSG00000117983|chr11:1248507-1248507|C/-|frameshift_variant;MUC5B|p.S3878Pfs*27|1|0.13|ENSG00000117983|chr11:1248507-1248507|C/-|frameshift_variant;MUC5B|p.S4017Lfs*56|1|0.22|ENSG00000117983|chr11:1248928-1248929|-/C|frameshift_variant;MUC5B|p.S4017Lfs*56|1|0.22|ENSG00000117983|chr11:1248928-1248929|-/C|frameshift_variant;MUC5B|p.S4017Lfs*56|1|0.22|ENSG00000117983|chr11:1248928-1248929|-/C|frameshift_variant;MUC5B|p.T4706Pfs*4|2|0.37|ENSG00000117983|chr11:1250996-1250996|A/-|frameshift_variant;MUC5B|p.T4706Pfs*4|2|0.37|ENSG00000117983|chr11:1250996-1250996|A/-|frameshift_variant;MUC5B|p.T4706Pfs*4|2|0.37|ENSG00000117983|chr11:1250996-1250996|A/-|frameshift_variant	102.7733458925114	0.03637199559902695	6				NaN	NaN	0	NaN	8754	3459	12210
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12216	32.407	NaN	4443.3	30	0	1675.3	0.106			+	21031	KKKHFLPH	8	36	345.5464846583227	1033.617624575168	3	345.5463562011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KKKHFLPH_	REV__CHD8|p.N2371Ifs*6|1|0.32|ENSG00000100888|chr14:21391017-21391017|T/-|frameshift_variant;REV__CHD8|p.N2371Kfs*2|2|0.24|ENSG00000100888|chr14:21391016-21391017|-/T|frameshift_variant;REV__ENSG00000100888|ENST00000646647|CHD8;REV__nc|ENSG00000100888|Q9HCK8-2|CHD8	18.324413293986947	0.7971860551947066	6				NaN	NaN	0	NaN	8755	3459	12210
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12217	32.408	NaN	2664.6	30	0	548.7	0.036	+			48250	VTDETFLEK	9	62	541.2746136044065	1080.5346742756128	2	541.274658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VTDETFLEK_	ENSG00000128641|ENST00000392318|MYO1B;ENST00000494129.1_1_2:192246088-192252282:+|nuORF;MYO1B|p.A603Sfs*37|1|0.42|ENSG00000128641|chr2:191390310-191390311|-/A|frameshift_variant;MYO1B|p.F948Cfs*47|1|0.41|ENSG00000128641|chr2:191411140-191411141|-/TG|frameshift_variant;MYO1B|p.S730Afs*4|2|0.4|ENSG00000128641|chr2:191393178-191393178|A/-|frameshift_variant;nc|ENSG00000128641|O43795-2|MYO1B	58.22992032128504	0.22837015374068087	6				NaN	NaN	0	NaN	8756	3459	12210
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12218	32.409	NaN	4456.4	30	0	531.58	0.139	+			46134	VDLSAPKV	8	59	414.74506752164325	827.4755821100865	2	414.7451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_VDLSAPKV_	AHNAK2|p.D1643Tfs*9|1|0.12|ENSG00000185567|chr14:104950524-104950524|C/-|frameshift_variant;AHNAK2|p.D4448Gfs*6|1|0.2|ENSG00000185567|chr14:104942108-104942109|-/C|frameshift_variant;AHNAK2|p.E5149Gfs*8|1|0.32|ENSG00000185567|chr14:104940005-104940006|-/C|frameshift_variant;AHNAK2|p.E5446Gfs*7|1|0.32|ENSG00000185567|chr14:104939114-104939115|-/C|frameshift_variant;AHNAK2|p.L4206Cfs*19|1|0.12|ENSG00000185567|chr14:104942835-104942835|G/-|frameshift_variant;AHNAK2|p.P2536Lfs*14|1|0.11|ENSG00000185567|chr14:104947844-104947844|G/-|frameshift_variant;ENSG00000185567|ENST00000333244|AHNAK2;nc|ENSG00000185567|Q8IVF2-3|AHNAK2	64.20726635412375	0.4601301477144759	6				NaN	NaN	0	NaN	8757	3459	12210
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12236	32.448	NaN	6611	30	0	866.64	0.214	+			20582	KFVNKSYLL	9	67	556.3291065278912	1110.6436601225823	2	556.3297119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KFVNKSYLL_	ENSG00000144736|ENST00000325599|SHQ1;nc|ENSG00000144736|Q6PI26-2|SHQ1	53.08895987439943	0.27122541748218487	6				NaN	NaN	0	NaN	8772	3462	12235
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12237	32.452	NaN	5664.8	30	0	557.04	0.106	+			50821	YESAKVLNV	9	82	511.77906419189196	1021.543575450584	2	511.7795715332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YESAKVLNV_	ENSG00000130222|ENST00000252506|GADD45G	61.691277971877994	0.19951612995419254	6				NaN	NaN	0	NaN	8773	3462	12235
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12238	32.454	NaN	2646.6	30	0	339.95	0.106	+			7021	CSASVIYHY	9	68	550.2483608499601	1098.4821687667202	2	550.7500610351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_C(Carbamidomethyl (C))SASVIYHY_	ENSG00000167632|ENST00000438773|TRAPPC9;nc|ENSG00000167632|Q96Q05-2|TRAPPC9;nc|ENSG00000167632|Q96Q05-3|TRAPPC9;TRAPPC9|p.Q563Hfs*5|1|0.04|ENSG00000167632|chr8:140300548-140300549|-/ATGCATGTGCA|frameshift_variant	79.45101966838831	0.09992237243120712	6				NaN	NaN	0	NaN	8774	3462	12235
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12239	32.456	NaN	2117.8	30	0	302.07	0.106			+	45368	TVTCSNIIY	9	62	507.25068700158903	1012.4868210699781	2	507.2511291503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TVTCSNIIY_	REV__tr|U7SVJ4|U7SVJ4_FUSNUMiaB-liketRNAmodifyingenzymeOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01249PE=4SV=1	42.396135135203025	0.392153681582562	6				NaN	NaN	0	NaN	8775	3462	12235
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12240	32.458	NaN	2969.1	30	0	878.68	0.106	+			29010	NSPFLLSPPQ	10	35	367.1975397997119	1098.5707899993356	3	367.1976318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NSPFLLSPPQ_	ENST00000603542.5_1_20:10200008-10200131:-|nuORF	19.996771675451527	0.7148376616046445	6				NaN	NaN	0	NaN	8776	3462	12235
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12241	32.459	NaN	3115.8	30	0	290.96	0.044	+			11480	FNWKIWPRWRT	11	64	530.6234012625224	NaN	0	530.6238403320312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FNWKIWPRWRT_	ENST00000540171.2_1_14:105147650-105150445:+|nuORF	17.16674453292914	0.456735970842152	6				NaN	NaN	0	NaN	8777	3462	12235
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12242	32.46	NaN	1247.9	30	0	222.87	0.145			+	25263	LNNHAVGRLD	10	35	370.19903564453125	NaN	0	370.19903564453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LNNHAVGRLD_	REV__ENSG00000224389|ENST00000435363|C4B	33.921630207806714	0.38879399011744475	6				NaN	NaN	0	NaN	8778	3462	12235
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12260	32.5	NaN	56746	30	0	17385	0.202	+			3277	ASLPLAVTK	9	85	450.2817268993054	898.5489008654108	2	450.28143310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASLPLAVTK_	ENSG00000160796|ENST00000450053|NBEAL2;nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2;nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2	131.61620852596164	0.014413238321579053	6				NaN	NaN	0	NaN	8793	3465	12259
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12261	32.503	NaN	13368	30	0	3134.3	0.106	+			15008	GTNALLVVK	9	71	457.7872034604021	913.5598539876042	2	457.78692626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTNALLVVK_	ENSG00000006712|ENST00000221265|PAF1;nc|ENSG00000006712|Q8N7H5-2|PAF1;nc|ENSG00000006712|Q8N7H5-3|PAF1	148.98678547993487	0.0071052929883181565	6				NaN	NaN	0	NaN	8794	3465	12259
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12262	32.505	NaN	16978	30	0	5719	0.106	+			45041	TVGEVFYTK	9	78	522.2742245908222	1042.5338962484443	2	522.2744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVGEVFYTK_	ENSG00000204385|ENST00000229729|SLC44A4;nc|ENSG00000204385|Q53GD3-3|SLC44A4;SLC44A4|p.F618Sfs*25|1|0.43|ENSG00000204385|chr6:31864889-31864889|A/-|frameshift_variant;SLC44A4|p.G398Afs*7|1|0.29|ENSG00000204385|chr6:31869197-31869197|G/-|frameshift_variant;SLC44A4|p.N144Kfs*55|2|0.31|ENSG00000204385|chr6:31874757-31874758|-/T|frameshift_variant;SLC44A4|p.S619Lfs*9|1|0.31|ENSG00000204385|chr6:31864888-31864889|-/A|frameshift_variant	134.7655990226056	0.012935733000282069	6				NaN	NaN	0	NaN	8795	3465	12259
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12263	32.507	NaN	7871	30	0	2387.2	0.106			+	26279	LSTQLSKM	8	63	454.2494686321003	906.4843843310006	2	454.2492980957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSTQLSKM_	REV__ENSG00000162341|ENST00000294309|TPCN2;REV__ENST00000442692.2_1_11:68822646-68853210:+|nuORF;REV__ENST00000535009.5_1_11:68816453-68846494:+|nuORF;REV__TPCN2|p.G597Wfs*6|1|0.39|ENSG00000162341|chr11:69085234-69085235|-/T|frameshift_variant;REV__TPCN2|p.R704Afs*17|1|0.1|ENSG00000162341|chr11:69087132-69087132|C/-|frameshift_variant	69.6276240434122	0.4100012001731381	6				NaN	NaN	0	NaN	8796	3465	12259
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12264	32.509	NaN	6676.9	30	0	542.86	0.106	+			19939	KEFIKIVEA	9	70	538.8213014307611	1075.628049928322	2	538.8214111328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEFIKIVEA_	ENSG00000198898|ENST00000361183|CAPZA2;ENST00000426421.5_1_7:116544367-116557918:+|nuORF	125.68205650279488	0.017759985800556374	6				NaN	NaN	0	NaN	8797	3465	12259
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12265	32.51	NaN	7144.1	30	0	1061.6	0.106	+			5548	AVALPLQTK	9	70	470.7949760570833	939.5753991809667	2	470.794677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AVALPLQTK_	ENSG00000171566|ENST00000499023|PLRG1;ENST00000512719.5_1_4:155467261-155471460:-|nuORF;nc|ENSG00000171566|O43660-2|PLRG1	68.78682469695295	0.14603441672067394	6				NaN	NaN	0	NaN	8798	3465	12259
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12266	32.512	NaN	1242	30	0	439.7	0.038	+			7434	DFEDDFIPLP	10	42	604.279268079236	1206.5439832252719	2	604.2792358398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DFEDDFIPLP_	ENSG00000110066|ENST00000304363|KMT5B;ENST00000441488.6_1_11:67925157-67938746:-|nuORF	16.473147378115264	0.7327422906225664	6				NaN	NaN	0	NaN	8799	3465	12259
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12284	32.55	NaN	22114	30	0	9008.4	0.214	+			31042	QEVLIKTV	8	70	465.28697225227063	928.5593915713413	2	465.2866516113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QEVLIKTV_	nc|ENSG00000198788|Q02817|MUC2	129.42129120953632	0.22108578470213103	6				NaN	NaN	0	NaN	8814	3468	12283
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12285	32.554	NaN	3845.9	30	0	390.61	0.106			+	25849	LSERLAAI	8	63	436.7636457331266	871.5127385330533	2	436.76336669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSERLAAI_	REV__ENST00000520150.5_1_5:179268915-179285842:-|nuORF	79.71258880314673	0.32596852995588826	6				NaN	NaN	0	NaN	8815	3468	12283
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12286	32.556	NaN	3000.9	30	0	812.32	0.106	+			5930	AVLGRHGPFQ	10	37	361.2015775592952	1080.5829032780855	3	361.2015380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVLGRHGPFQ_	ENST00000257209.8_1_18:33877791-33877938:+|nuORF	16.473147378115264	0.7327422906225664	6				NaN	NaN	0	NaN	8816	3468	12283
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12287	32.557	NaN	2850.8	30	0	732.3	0.106	+			18328	IPVDMKDNY	9	68	547.7631004517046	1093.5116479702092	2	547.7633056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IPVDMKDNY_	ANKEF1|p.Y712Sfs*5|1|0.07|ENSG00000132623|chr20:10054561-10054562|-/CCTGGAA|frameshift_variant;ENSG00000132623|ENST00000378392|ANKEF1	77.31757898189308	0.1091473830098891	6				NaN	NaN	0	NaN	8817	3468	12283
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12288	32.559	NaN	2205	30	0	243.58	0.106			+	33221	RFPPPHHH	8	67	512.7634410163786	1023.5123290995572	2	512.7631225585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RFPPPHHH_	REV__ENST00000495180.1_1_3:111632376-111632535:+|nuORF;REV__PHLDB2|p.P552Hfs*18|1|0.06|ENSG00000144824|chr3:111913637-111913638|-/AT|frameshift_variant	37.028477286268924	0.6747514403204248	6				NaN	NaN	0	NaN	8818	3468	12283
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12289	32.561	NaN	5088.8	30	0	984.69	0.039			+	27767	MRGRTLLWRA	10	56	420.5764425968431	1258.7074983907294	3	420.57623291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MRGRTLLWRA_	REV__ENSG00000172940|ENST00000311856|SLC22A13;REV__nc|ENSG00000172940|Q9Y226-2|SLC22A13;REV__SLC22A13|p.P304Rfs*4|1|0.14|ENSG00000172940|chr3:38275471-38275471|C/-|frameshift_variant	40.05817265558897	0.5486090488315611	6				NaN	NaN	0	NaN	8819	3468	12283
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12290	32.562	NaN	2045.1	30	0	474.7	0.139			+	11571	FPMLFILS	8	53	492.26527452014744	982.5159961070949	2	492.2685241699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_FPM(Oxidation (M))LFILS_	REV__ENSG00000139636|ENST00000267102|LMBR1L;REV__ENST00000547670.5_1_12:49494396-49503620:-|nuORF;REV__ENST00000550867.5_1_12:49494935-49504419:-|nuORF;REV__nc|ENSG00000139636|Q6UX01-2|LMBR1L;REV__nc|ENSG00000139636|Q6UX01-3|LMBR1L;REV__nc|ENSG00000139636|Q6UX01-4|LMBR1L;REV__nc|ENSG00000139636|Q6UX01-5|LMBR1L	54.76467175910256	0.5536104764165384	6				NaN	NaN	0	NaN	8820	3468	12283
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12308	32.6	NaN	28683	30	0	3552.8	0.214	+			35313	SAMKAVTEL	9	75	475.2547393953109	948.4949258574218	2	475.2545166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAMKAVTEL_	ENSG00000128245|ENST00000248975|YWHAH	109.43880257439609	0.029570636687953285	6				NaN	NaN	0	NaN	8835	3471	12307
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12309	32.604	NaN	22885	30	0	4790.5	0.106	+			12590	GEHGLIIRV	9	81	497.2958913321045	992.577229731009	2	497.2955322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEHGLIIRV_	ENSG00000078618|ENST00000352171|NRDC;nc|ENSG00000078618|O43847-2|NRDC	70.8162118820467	0.13725933411854815	6				NaN	NaN	0	NaN	8836	3471	12307
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12310	32.606	NaN	5045.4	30	0	761.03	0.106	+			3163	ASINLNAINK	10	71	529.3039068847436	1056.593260836287	2	529.3043823242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASINLNAINK_	ENSG00000149925|ENST00000642816|ALDOA;ENST00000398050.3_1_10:127355642-127355750:-|nuORF;nc|ENSG00000149925|P04075|ALDOA	93.5975768576971	0.11047702954938905	6				NaN	NaN	0	NaN	8837	3471	12307
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12311	32.608	NaN	4014.5	30	0	445.79	0.106			+	15506	GVATALRDNLV	11	70	564.8219374541587	1127.6293219751174	2	564.8223876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GVATALRDNLV_	REV__ENST00000247295.4_1_9:134133967-134134456:-|nuORF	53.08895987439943	0.38514566451266113	6				NaN	NaN	0	NaN	8838	3471	12307
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12312	32.61	NaN	3908.1	30	0	481.38	0.106	+			41258	SVLHGMVFK	9	61	509.28137711120405	1016.5482012892081	2	509.2817687988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVLHGMVFK_	ENSG00000156261|ENST00000286788|CCT8;nc|ENSG00000156261|P50990-2|CCT8;nc|ENSG00000156261|P50990-3|CCT8	56.72105179125745	0.24094814563026265	6				NaN	NaN	0	NaN	8839	3471	12307
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12313	32.611	NaN	3546.7	30	0	809.93	0.037				-1	STIPKRAVCP	10	43	376.87691329635777	1127.6089104892733	3	376.8768615722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_STIPKRAVC(Carbamidomethyl (C))P_	ENST00000546778.5_1_12:77157996-77214864:+|nuORF;nc|ENSG00000186908|Q8IUH5-2|ZDHHC17	33.921630207806714	0.6028135429846169	6				NaN	NaN	0	NaN	8840	3471	12307
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12314	32.612	NaN	2953.8	30	0	421.66	0.14			+	-1	FLIFHKAM	8	67	511.77906419189196	1021.543575450584	2	511.274169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_FLIFHKAM(Oxidation (M))_	REV__ENST00000500698.1_1_11:9778373-9781063:-|nuORF	28.2542754592877	0.7411748056684583	6				NaN	NaN	0	NaN	8841	3471	12307
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12332	32.65	NaN	4349.3	30	0	787.4	0.214			+	48153	VSYPGTLLTQ	10	72	539.7937426073977	1077.5729322815953	2	539.7947998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSYPGTLLTQ_	REV__ENSG00000078674|ENST00000325083|PCM1;REV__nc|ENSG00000078674|Q15154-2|PCM1;REV__nc|ENSG00000078674|Q15154-4|PCM1;REV__nc|ENSG00000078674|Q15154-5|PCM1;REV__PCM1|p.N1992Tfs*15|1|0.25|ENSG00000078674|chr8:18025580-18025580|A/-|frameshift_variant	93.1432384553994	0.11307820852620741	6				NaN	NaN	0	NaN	8856	3474	12331
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12333	32.654	NaN	7069.2	30	0	3355.4	0.106	+			13981	GSATSLVFK	9	57	455.2556530109659	908.4967530887318	2	455.2554626464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSATSLVFK_	ENSG00000227345|ENST00000616448|PARG;PARG|p.D904Tfs*4|1|0.16|ENSG00000227345|chr10:49820231-49820231|C/-|frameshift_variant;PARG|p.N277Mfs*5|3|0.4|ENSG00000227345|chr10:49933618-49933618|T/-|frameshift_variant	124.08010499294276	0.018729767491916592	6				NaN	NaN	0	NaN	8857	3474	12331
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12334	32.656	NaN	5848.1	30	0	2646.8	0.106	+			8921	EEVKSFRVL	9	61	553.8136643589314	1105.6127757846627	2	553.8143920898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EEVKSFRVL_	ENSG00000139163|ENST00000266517|ETNK1;nc|ENSG00000139163|Q9HBU6-2|ETNK1;nc|ENSG00000139163|Q9HBU6|ETNK1	60.11826168202944	0.21262886028301267	6				NaN	NaN	0	NaN	8858	3474	12331
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12335	32.658	NaN	5118.8	30	0	493.64	0.106	+			16196	HEAQRLLAL	9	74	525.8059764284613	1049.5973999237226	2	525.8064575195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HEAQRLLAL_	ENSG00000167600|ENST00000310054|CYP2S1;nc|ENSG00000167600|Q96SQ9-2|CYP2S1	54.776311868738084	0.25715957988447635	6				NaN	NaN	0	NaN	8859	3474	12331
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12336	32.66	NaN	3498.6	30	0	435.97	0.106	+			41259	SVLHGMVFK	9	58	509.28137711120405	1016.5482012892081	2	509.2810363769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVLHGMVFK_	ENSG00000156261|ENST00000286788|CCT8;nc|ENSG00000156261|P50990-2|CCT8;nc|ENSG00000156261|P50990-3|CCT8	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	8860	3474	12331
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12337	32.661	NaN	3598.9	30	0	490.61	0.036	+			11007	FEHPNVVRL	9	57	555.8071419960806	1109.5997310589612	2	555.8067016601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FEHPNVVRL_	ENSG00000105810|ENST00000424848|CDK6;ENSG00000135446|ENST00000257904|CDK4	60.97194046774394	0.20551255781574032	6				NaN	NaN	0	NaN	8861	3474	12331
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12338	32.662	NaN	10112	30	0	3181.1	0.14	+			44806	TTQVVGILK	9	65	479.80035375606883	957.5861545789377	2	479.8002014160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TTQVVGILK_	ENSG00000198898|ENST00000361183|CAPZA2;ENST00000426421.5_1_7:116544367-116557918:+|nuORF	65.15724298150197	0.17062369902793603	6				NaN	NaN	0	NaN	8862	3474	12331
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12352	32.7	NaN	42051	30	0	6783.5	0.214	+			38834	SSNIFTVAK	9	75	483.76642544567005	965.5182979581401	2	483.76629638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSNIFTVAK_	ENSG00000100280|ENST00000357586|AP1B1;ENST00000482818.1_1_22:29726183-29727937:-|nuORF;nc|ENSG00000100280|Q10567-2|AP1B1;nc|ENSG00000100280|Q10567-3|AP1B1;nc|ENSG00000100280|Q10567-4|AP1B1	154.0112374973812	0.005934173778894772	6				NaN	NaN	0	NaN	8873	3477	12351
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12353	32.704	NaN	12139	30	0	1954	0.106	+			28321	NEFTTHVM	8	71	489.7211659065701	977.4277788799402	2	489.7209777832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NEFTTHVM_	ENSG00000167081|ENST00000373489|PBX3;ENSG00000185630|ENST00000420696|PBX1;ENSG00000204304|ENST00000375050|PBX2;ENST00000478678.5_1_6:32154995-32157692:-|nuORF;ENST00000538998.1_1_9:128606084-128725334:+|nuORF;nc|ENSG00000167081|P40426-2|PBX3;nc|ENSG00000167081|P40426-5|PBX3;nc|ENSG00000185630|P40424-2|PBX1;nc|ENSG00000185630|P40424-3|PBX1	71.29570347882199	0.39610197767395533	6				NaN	NaN	0	NaN	8874	3477	12351
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12354	32.706	NaN	12552	30	0	3639.7	0.106	+			18278	IPIKNVEM	8	83	472.2677340506806	942.5209151681612	2	472.2675476074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IPIKNVEM_	ENSG00000089472|ENST00000343002|HEPH;nc|ENSG00000089472|Q9BQS7-2|HEPH;nc|ENSG00000089472|Q9BQS7-3|HEPH;nc|ENSG00000089472|Q9BQS7-4|HEPH	74.25504064058377	0.37144338840759816	6				NaN	NaN	0	NaN	8875	3477	12351
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12355	32.708	NaN	6976.1	30	0	3161	0.106	+			803	AEFTKSIAKF	10	62	381.2134388925711	1140.6184872779133	3	381.213134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEFTKSIAKF_	ENSG00000118363|ENST00000263672|SPCS2	53.59686742100583	0.4240759338601513	6				NaN	NaN	0	NaN	8876	3477	12351
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12356	32.71	NaN	3979.2	30	0	1476.6	0.106				-1	EISVMCLLF	9	62	535.7682485248969	1069.5219441165937	2	535.7694091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_EISVM(Oxidation (M))CLLF_	ENST00000578321.1_1_17:19913189-19913486:+|nuORF	50.0245360154114	0.3026755932229825	6				NaN	NaN	0	NaN	8877	3477	12351
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12357	32.712	NaN	1991.7	30	0	94.174	0.033	+			188	AALDKATVL	9	57	451.2711262144698	900.5276994957396	2	451.27130126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AALDKATVL_	ENSG00000150593|ENST00000280154|PDCD4;ENST00000489049.5_1_10:112647518-112650449:+|nuORF;nc|ENSG00000150593|Q53EL6-2|PDCD4	44.116797842482775	0.37197099687881774	6				NaN	NaN	0	NaN	8878	3477	12351
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12375	32.747	NaN	8738.9	30	0	1209.6	0.214	+			27411	MKVQLVMVG	9	75	502.78323932475973	1003.5519257163195	2	502.7810974121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MKVQLVMVG_	ENST00000506393.5_1_5:140047926-140048692:+|nuORF	92.19062340807069	0.05868925795948219	6				NaN	NaN	0	NaN	8893	3480	12374
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12376	32.751	NaN	4344.2	30	0	829.15	0.106	+			49103	VVLGLVQSL	9	65	464.29744957084336	926.5803462084867	2	464.297119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVLGLVQSL_	ADCY8|p.A1194V|1|0.21|ENSG00000155897|chr8:130780565-130780565|G/A|missense_variant;ENSG00000155897|ENST00000286355|ADCY8	30.317721548370564	0.5199124245378496	6				NaN	NaN	0	NaN	8894	3480	12374
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12377	32.753	NaN	3691.7	30	0	463.18	0.106	+			6149	AVQEFGLAR	9	66	495.7726657583277	989.5307785834555	2	495.771728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVQEFGLAR_	ENSG00000169230|ENST00000303204|PRELID1;nc|ENSG00000169230|Q9Y255-2|PRELID1	83.6470233535746	0.08277643980271215	6				NaN	NaN	0	NaN	8895	3480	12374
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12378	32.755	NaN	25399	30	0	8650.2	0.106	+			5152	ATSVITIVK	9	75	466.29478502365566	930.5750171141113	2	466.29443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATSVITIVK_	ENSG00000197063|ENST00000357736|MAFG	195.06343300570734	5.420119182691198E-05	6				NaN	NaN	0	NaN	8896	3480	12374
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12379	32.756	NaN	3684.3	30	0	563.3	0.106	+			44756	TTMVPTAALAK	11	59	552.3103952094257	1102.6062374856513	2	552.3109130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TTMVPTAALAK_	ENSG00000197858|ENST00000355091|GPAA1;ENST00000529638.1_1_8:145140125-145141025:+|nuORF;ENST00000530796.1_1_8:145140395-145141025:+|nuORF;ENST00000534072.1_1_8:145139936-145140713:+|nuORF;nc|ENSG00000197858|O43292-2|GPAA1	96.0336014099291	0.0740748020614995	6				NaN	NaN	0	NaN	8897	3480	12374
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12380	32.758	NaN	2021.5	30	0	648.9	0.038	+			36892	SIHDFCLVSK	10	63	603.3033642662892	1204.5921755993784	2	603.3032836914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_SIHDFC(Carbamidomethyl (C))LVSK_	ENSG00000167642|ENST00000301244|SPINT2;ENST00000590210.1_1_19:38755508-38778604:+|nuORF;SPINT2|p.G70Afs*10|1|0.04|ENSG00000167642|chr19:38283725-38283725|G/-|frameshift_variant	72.87924865735499	0.25379688738724415	6				NaN	NaN	0	NaN	8898	3480	12374
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12381	32.759	NaN	4064.2	30	0	1736	0.148				-1	LSLVCRMLKF	10	54	422.9065565012771	1265.6978401040315	3	422.9059753417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_LSLVC(Carbamidomethyl (C))RMLKF_	ENST00000381989.3_1_13:25072288-25074457:-|nuORF	26.063383197487333	0.6669871633831898	6				NaN	NaN	0	NaN	8899	3480	12374
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12399	32.799	NaN	72255	30	0	13371	0.214	+			44274	TSALPIIQK	9	96	485.8003684265536	969.5861839199072	2	485.8000183105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSALPIIQK_	ENSG00000147872|ENST00000276914|PLIN2;ENST00000472715.1_1_9:19126103-19127487:-|nuORF;ENST00000475923.1_1_9:19126103-19126313:-|nuORF;PLIN2|p.V348*|1|0.15|ENSG00000147872|chr9:19116520-19116520|C/-|frameshift_variant	153.03582135801034	0.006161527642367307	6				NaN	NaN	0	NaN	8914	3483	12398
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12400	32.803	NaN	6532.6	30	0	1021.7	0.106	+			17369	IALVGKAM	8	58	401.74667444390906	801.4787959546181	2	401.7464294433594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IALVGKAM_	ENSG00000163527|ENST00000295770|STT3B;STT3B|p.E758Nfs*18|1|0.05|ENSG00000163527|chr3:31633017-31633018|-/AAACATTC|frameshift_variant	60.29395666154354	0.49887135096048313	6				NaN	NaN	0	NaN	8915	3483	12398
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12401	32.805	NaN	4596.7	30	0	1215.3	0.106	+			25368	LPGKTYSF	8	61	456.7449062144173	911.4752594956346	2	456.7444152832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LPGKTYSF_	ENSG00000102531|ENST00000492622|FNDC3A;FNDC3A|p.R736C|1|0.09|ENSG00000102531|chr13:49191364-49191364|C/T|missense_variant;nc|ENSG00000102531|Q9Y2H6-2|FNDC3A	34.172542307311794	0.6954784234644539	6				NaN	NaN	0	NaN	8916	3483	12398
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12402	32.807	NaN	2944	30	0	345.36	0.106	+			28342	NEIKTQVEL	9	66	537.295301767926	1072.576050602652	2	537.2955932617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NEIKTQVEL_	ENSG00000100897|ENST00000446197|DCAF11;ENST00000396936.5_1_14:24584803-24587275:+|nuORF;ENST00000557802.5_1_14:24584825-24587275:+|nuORF;nc|ENSG00000100897|Q8TEB1-2|DCAF11	101.25262130126117	0.03792372629710479	6				NaN	NaN	0	NaN	8917	3483	12398
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12403	32.808	NaN	4384.7	30	0	505.38	0.106	+			29685	PGSISDKFFQK	11	80	418.5556604570132	1252.6451519712396	3	418.5556335449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PGSISDKFFQK_	ENSG00000089472|ENST00000343002|HEPH;HEPH|p.R1086Qfs*4|1|0.29|ENSG00000089472|chrX:66266444-66266445|-/C|frameshift_variant;nc|ENSG00000089472|Q9BQS7-2|HEPH;nc|ENSG00000089472|Q9BQS7-3|HEPH;nc|ENSG00000089472|Q9BQS7-4|HEPH	104.06999374311218	0.052272977646279854	6				NaN	NaN	0	NaN	8918	3483	12398
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12404	32.81	NaN	6641.3	30	0	1571.4	0.039			+	-1	DAMHKLRLRE	10	54	428.8991998656925	NaN	0	428.8992614746094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_DAM(Oxidation (M))HKLRLRE_	REV__ENSG00000124766|ENST00000244745|SOX4;REV__ENSG00000176887|ENST00000322002|SOX11;REV__ENSG00000177732|ENST00000342665|SOX12	30.568863376406313	0.39980281766270914	6				NaN	NaN	0	NaN	8919	3483	12398
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12405	32.811	NaN	2488.6	30	0	195.32	0.141	+			8577	EAYNAVVRY	9	58	542.7744146418096	1083.534276350419	2	542.7742919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EAYNAVVRY_	ENSG00000161791|ENST00000335154|FMNL3;ENST00000549137.1_1_12:50039600-50046016:-|nuORF;nc|ENSG00000161791|Q8IVF7-2|FMNL3;nc|ENSG00000161791|Q8IVF7|FMNL3	58.22992032128504	0.22837015374068087	6				NaN	NaN	0	NaN	8920	3483	12398
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12423	32.851	NaN	6908.9	30	0	976.92	0.214	+			10245	ETKKEVEL	8	71	488.2715744993119	974.5285960654238	2	488.2715148925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ETKKEVEL_	ENSG00000092295|ENST00000206765|TGM1;nc|ENSG00000092295|P22735-2|TGM1	79.71258880314673	0.32596852995588826	6				NaN	NaN	0	NaN	8935	3486	12422
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12424	32.854	NaN	4128.2	30	0	843.34	0.106	+			5331	ATVNEIVLK	9	56	493.79730485781596	985.5800567824319	2	493.7976989746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATVNEIVLK_	ARHGEF18-MAPKAP1|1|fusion;ARHGEF18-MAPKAP1|2|fusion;ENSG00000119487|ENST00000265960|MAPKAP1;ENST00000497932.5_1_9:128201168-128209649:-|nuORF;nc|ENSG00000119487|Q9BPZ7-2|MAPKAP1;nc|ENSG00000119487|Q9BPZ7-3|MAPKAP1;nc|ENSG00000119487|Q9BPZ7-4|MAPKAP1	134.7655990226056	0.012935733000282069	6				NaN	NaN	0	NaN	8936	3486	12422
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12425	32.857	NaN	4285.5	30	0	1119.4	0.106	+			11081	FETKVTTL	8	56	469.763164131744	937.5117753302881	2	469.7631530761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FETKVTTL_	ENSG00000165688|ENST00000371717|PMPCA;ENST00000371720.5_1_9:139305120-139310743:+|nuORF	60.11826168202944	0.5006107059937851	6				NaN	NaN	0	NaN	8937	3486	12422
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12426	32.858	NaN	7696.9	30	0	1343.7	0.106	+			27650	MPSASMTRL	9	71	497.24646450750106	992.4783760818021	2	497.24639892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MPSASMTRL_	ENSG00000104419|ENST00000323851|NDRG1;ENST00000519278.5_1_8:134251123-134266883:-|nuORF;nc|ENSG00000103034|Q9ULP0-2|NDRG4;nc|ENSG00000103034|Q9ULP0-3|NDRG4;nc|ENSG00000103034|Q9ULP0-5|NDRG4;nc|ENSG00000103034|Q9ULP0-6|NDRG4;nc|ENSG00000103034|Q9ULP0-7|NDRG4;nc|ENSG00000103034|Q9ULP0-8|NDRG4;nc|ENSG00000104419|Q92597-2|NDRG1;nc|ENSG00000104419|Q92597-3|NDRG1	61.691277971877994	0.19951612995419254	6				NaN	NaN	0	NaN	8938	3486	12422
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12427	32.86	NaN	2613.1	30	0	268.7	0.106	+			28123	NAIKWNFTK	9	64	561.3085214676306	1120.6024900020611	2	561.3092651367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NAIKWNFTK_	ENSG00000167468|ENST00000354171|GPX4;ENST00000588919.5_1_19:1105440-1106636:+|nuORF;nc|ENSG00000167468|P36969-2|GPX4	56.43379154798735	0.2433427591689151	6				NaN	NaN	0	NaN	8939	3486	12422
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12428	32.862	NaN	3752.4	30	0	630.34	0.035	+			8743	EEFLNGRAV	9	66	517.7670568255804	1033.5195607179608	2	517.7671508789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EEFLNGRAV_	ENSG00000102858|ENST00000262370|MGRN1;nc|ENSG00000102858|O60291-3|MGRN1;nc|ENSG00000102858|O60291-4|MGRN1;nc|ENSG00000102858|O60291|MGRN1	79.45101966838831	0.09992237243120712	6				NaN	NaN	0	NaN	8940	3486	12422
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12429	32.863	NaN	2303.1	30	0	269.23	0.14	+			50290	WSFFEALV	8	66	499.75214738376224	NaN	0	499.7430419921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_WSFFEALV_	ENSG00000086598|ENST00000262225|TMED2;ENST00000543425.1_1_12:124075023-124081273:+|nuORF	52.29916861842294	1.7418937515398478	6				NaN	NaN	0	NaN	8941	3486	12422
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12447	32.902	NaN	204150	30	0	30349	0.212	+			50468	YAEVGRVL	8	105	453.7557398992112	905.4969268652225	2	453.7555847167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YAEVGRVL_	ANKRD17|p.L2249Yfs*84|1|0.34|ENSG00000132466|chr4:73090884-73090884|G/-|frameshift_variant;ENSG00000131503|ENST00000360839|ANKHD1;ENSG00000132466|ENST00000358602|ANKRD17;ENST00000514252.1_1_4:73978989-74017230:-|nuORF;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1;nc|ENSG00000132466|O75179-2|ANKRD17;nc|ENSG00000132466|O75179-6|ANKRD17;nc|ENSG00000132466|O75179-7|ANKRD17	93.19546047674547	0.2677966331495483	6				NaN	NaN	0	NaN	8956	3489	12446
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12448	32.906	NaN	10182	30	0	1782.5	0.106	+			47870	VSLGLAVSK	9	71	437.273908860065	872.53326478693	2	437.2736511230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSLGLAVSK_	ENSG00000018869|ENST00000586929|ZNF582;ENSG00000197302|ENST00000316491|KRBOX5;ENSG00000197566|ENST00000311331|ZNF624;ENST00000529943.6_1_16:31724760-31765604:+|nuORF;ENST00000534277.5_1_16:31724760-31767037:+|nuORF;ENST00000579983.1_1_17:16534952-16537956:-|nuORF;ZNF624|p.I325Nfs*9|1|0.21|ENSG00000197566|chr17:16623912-16623913|-/T|frameshift_variant;ZNF624|p.I325Sfs*167|1|0.46|ENSG00000197566|chr17:16623913-16623913|T/-|frameshift_variant;ZNF624|p.K498Nfs*74|1|0.49|ENSG00000197566|chr17:16623392-16623392|T/-|frameshift_variant;ZNF624|p.K666Nfs*130|1|0.46|ENSG00000197566|chr17:16622888-16622888|T/-|frameshift_variant;ZNF624|p.K787Ifs*14|1|0.11|ENSG00000197566|chr17:16622526-16622527|-/ATAAATGTAATGAA|frameshift_variant	143.37361013837676	0.008897369944672323	6				NaN	NaN	0	NaN	8957	3489	12446
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12449	32.908	NaN	3311.2	30	0	482.73	0.106	+			18955	IVQDEILAH	9	69	519.2850952148438	NaN	0	519.2850952148438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IVQDEILAH_	ENSG00000171453|ENST00000642195|POLR1C;ENST00000481352.6_1_6:43484832-43487644:+|nuORF;nc|ENSG00000171453|O15160-2|POLR1C	96.66504779109242	0.02816047575905831	6				NaN	NaN	0	NaN	8958	3489	12446
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12450	32.91	NaN	5106.8	30	0	517.57	0.106	+			25626	LQQDLTSM	8	63	468.22856962456615	NaN	0	468.2284240722656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LQQDLTSM_	ENSG00000147475|ENST00000519638|ERLIN2;ENST00000521993.2_1_8:37597892-37607371:+|nuORF	60.97194046774394	1.7418937515398478	6				NaN	NaN	0	NaN	8959	3489	12446
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12451	32.912	NaN	4199.6	30	0	607.33	0.106	+			9834	EPLSSETQY	9	61	527.2405447984429	1052.4665366636857	2	527.2413330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EPLSSETQY_	ENSG00000143398|ENST00000368888|PIP5K1A;ENST00000480546.1_1_10:95718567-95721153:-|nuORF;nc|ENSG00000143398|Q99755-2|PIP5K1A;nc|ENSG00000143398|Q99755-3|PIP5K1A;nc|ENSG00000143398|Q99755-4|PIP5K1A;nc|ENSG00000180764|A2A3N6|PIPSL	74.25504064058377	0.12238981753128622	6				NaN	NaN	0	NaN	8960	3489	12446
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12452	32.914	NaN	2449	30	0	974.85	0.036			+	-1	RSVMRMSVK	9	55	555.3016357421875	NaN	0	555.3016357421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_RSVM(Oxidation (M))RMSVK_	REV__ENST00000539018.5_1_17:57955667-57970134:-|nuORF;REV__ENST00000592145.1_1_17:57969215-57970134:-|nuORF;REV__ENST00000593110.5_1_17:57963566-57970134:-|nuORF	35.61828744233558	0.29773779453147337	6				NaN	NaN	0	NaN	8961	3489	12446
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12453	32.914	NaN	6514.4	30	0	2487.6	0.14	+			25913	LSGPAIKPVA	10	70	476.7949971161605	951.575441299121	2	476.7947082519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSGPAIKPVA_	tr|U7SXI5|U7SXI5_FUSNUDihydroorotatedehydrogenaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=pyrDPE=3SV=1	51.33545320467046	0.4446945571623749	6				NaN	NaN	0	NaN	8962	3489	12446
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12471	32.951	NaN	40054	30	0	9831.6	0.214	+			24232	LESKGLTL	8	77	430.7579624684169	859.5013720036338	2	430.75787353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LESKGLTL_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;CLCA4|p.S847Kfs*4|1|0.28|ENSG00000016602|chr1:86580120-86580121|-/A|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1;ENSG00000016602|ENST00000370563|CLCA4	115.49404669440601	0.24099756539272307	6				NaN	NaN	0	NaN	8977	3492	12470
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12472	32.954	NaN	15304	30	0	1524.8	0.106	+			13000	GEVDPKVAL	9	84	464.2608885300331	926.5072241268663	2	464.2606506347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEVDPKVAL_	ENSG00000099795|ENST00000215565|NDUFB7;ENST00000593353.5_1_19:14676947-14682853:-|nuORF	95.81516180277367	0.04847050768394289	6				NaN	NaN	0	NaN	8978	3492	12470
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12473	32.957	NaN	7799.6	30	0	1814.7	0.106	+			17732	IEPADAHVL	9	68	482.7587370891328	963.5029212450656	2	482.75823974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IEPADAHVL_	ENSG00000121579|ENST00000240922|NAA50;nc|ENSG00000121579|Q9GZZ1-2|NAA50	35.61828744233558	0.47037581924408073	6				NaN	NaN	0	NaN	8979	3492	12470
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12474	32.959	NaN	10775	30	0	1753.7	0.106	+			38023	SPNAKEFVY	9	72	527.763936483097	1053.513320032994	2	527.7643432617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SPNAKEFVY_	ENSG00000183864|ENST00000327492|TOB2	126.24258497203832	0.01742065577488747	6				NaN	NaN	0	NaN	8980	3492	12470
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12475	32.96	NaN	20560	30	0	2581.7	0.106				-1	SECGKAFSL	9	78	499.73440671205407	997.4542604909082	2	500.2359924316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_SEC(Carbamidomethyl (C))GKAFSL_	ENSG00000106261|ENST00000324306|ZKSCAN1;ENSG00000186230|ENST00000334181|ZNF749;ENSG00000186272|ENST00000307658|ZNF17;ENSG00000186812|ENST00000330501|ZNF397;ENSG00000198393|ENST00000328654|ZNF26;ENST00000602050.1_1_19:57930944-57932846:+|nuORF;nc|ENSG00000186272|P17021-3|ZNF17;nc|ENSG00000186272|P17021|ZNF17;ZNF852|p.G393S|1|0.24|ENSG00000178917|chr3:44499600-44499600|C/T|missense_variant	76.16968421966216	0.11411088698345859	6				NaN	NaN	0	NaN	8981	3492	12470
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12476	32.962	NaN	3746.6	30	0	566.93	0.035	+			37750	SLTYNIAVV	9	66	490.2768538204577	978.5391547077154	2	490.77813720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLTYNIAVV_	ENST00000340648.5_1_21:45114371-45114962:+|nuORF	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	8982	3492	12470
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12495	32.998	NaN	43723	30	0	22888	0.214	+			32479	QVMSLGLQK	9	90	502.28384337595355	NaN	0	502.28369140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QVMSLGLQK_	ENST00000314423.11_1_16:69166475-69170710:+|nuORF;ENST00000562237.5_1_16:69166520-69170710:+|nuORF	167.22876102047192	0.012859988807432898	6				NaN	NaN	0	NaN	8998	3495	12494
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12496	33.002	NaN	52640	30	0	34380	0.106	+			17172	HTMEFALVK	9	80	538.2839992239054	1074.5534455146108	2	538.2843017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HTMEFALVK_	ENSG00000182636|ENST00000649030|NDN	124.08010499294276	0.018729767491916592	6				NaN	NaN	0	NaN	8999	3495	12494
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12497	33.004	NaN	6985.3	30	0	870.71	0.106	+			1711	AGVNFAIAK	9	73	445.75819643697406	889.5018399407481	2	445.75762939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AGVNFAIAK_	ENSG00000138375|ENST00000357276|SMARCAL1	181.80572006810442	0.001114768557639603	6				NaN	NaN	0	NaN	9000	3495	12494
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12498	33.006	NaN	8694.8	30	0	911.35	0.106	+			28295	NECGKAFSL	9	73	513.2394392623867	1024.4643255915732	2	513.2393188476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_NEC(Carbamidomethyl (C))GKAFSL_	ENSG00000197062|ENST00000421553|ZSCAN26;ENSG00000197782|ENST00000683561|ZNF780A;nc|ENSG00000197062|Q16670-2|ZSCAN26;nc|ENSG00000197062|Q16670|ZSCAN26;nc|ENSG00000197782|O75290-3|ZNF780A	93.5975768576971	0.05472259948179787	6				NaN	NaN	0	NaN	9001	3495	12494
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12499	33.008	NaN	1781.4	30	0	381.15	0.106			+	25800	LSAVGGLL	8	40	365.2302507531823	NaN	0	365.23046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSAVGGLL_	REV__ENSG00000112514|ENST00000488034|CUTA	28.2542754592877	1.7418937515398478	6				NaN	NaN	0	NaN	9002	3495	12494
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12500	33.009	NaN	7962.8	30	0	708.15	0.036	+			39568	STGHVGFIFK	10	65	546.7958683471346	1091.5771837610691	2	546.7952880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STGHVGFIFK_	ENSG00000137575|ENST00000260130|SDCBP;ENST00000523441.1_1_8:59490633-59492419:+|nuORF;nc|ENSG00000137575|O00560-2|SDCBP;nc|ENSG00000137575|O00560-3|SDCBP	95.81516180277367	0.09778090853194907	6				NaN	NaN	0	NaN	9003	3495	12494
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12517	33.043	NaN	67197	30	0	18400	0.214	+			44833	TTSVITIVK	9	92	481.30047279332894	960.5863926534579	2	481.2997741699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTSVITIVK_	ENSG00000198517|ENST00000343242|MAFK	180.86945649972546	0.001208757763874378	6				NaN	NaN	0	NaN	9017	3498	12516
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12518	33.047	NaN	5811.3	30	0	1097.6	0.106	+			16983	HPSEAHILF	9	62	525.7724733265511	1049.5303937199021	2	525.7731323242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HPSEAHILF_	ENSG00000066248|ENST00000264051|NGEF;nc|ENSG00000066248|Q8N5V2-2|NGEF;nc|ENSG00000066248|Q8N5V2-3|NGEF	57.81127852772723	0.2318599694398087	6				NaN	NaN	0	NaN	9018	3498	12516
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12519	33.049	NaN	18710	30	0	12361	0.036	+			41370	SVMELARLK	9	48	349.538905405405	1045.594886816415	3	349.538818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVMELARLK_	ENSG00000115649|ENST00000360507|CNPPD1	52.936696900407355	0.27249468807391813	6				NaN	NaN	0	NaN	9019	3498	12516
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12540	33.085	NaN	35832	30	0	8151.5	0.214	+			6290	AVSTFAMVK	9	90	477.2599298956415	952.505306858083	2	477.260009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVSTFAMVK_	ENSG00000172893|ENST00000355527|DHCR7;ENST00000534701.1_1_11:71149825-71152361:-|nuORF	112.41091882917199	0.026537921851008135	6				NaN	NaN	0	NaN	9037	3501	12539
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12541	33.088	NaN	37137	30	0	17787	0.106	+			43112	TERDLREVF	9	70	388.87200392321574	1163.5941823698472	3	388.871826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TERDLREVF_	ENSG00000136527|ENST00000453386|TRA2B;ENSG00000164548|ENST00000297071|TRA2A;ENST00000494255.5_1_7:23547037-23556014:-|nuORF;nc|ENSG00000136527|P62995-3|TRA2B;nc|ENSG00000164548|Q13595-2|TRA2A;nc|ENSG00000164548|Q13595-3|TRA2A;nc|ENSG00000164548|Q13595-4|TRA2A	51.19269402634007	0.2889735674168909	6				NaN	NaN	0	NaN	9038	3501	12539
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12542	33.09	NaN	11025	30	0	1388.3	0.106	+			19158	IYQKYIARF	9	56	401.2293738642161	1200.6662921928482	3	401.2293701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IYQKYIARF_	CASZ1|p.Y1191*|1|0.04|ENSG00000130940|chr1:10646251-10646251|G/-|frameshift_variant;ENSG00000130940|ENST00000377022|CASZ1;ENST00000496432.6_1_1:10713095-10754402:-|nuORF;nc|ENSG00000130940|Q86V15-2|CASZ1	37.81151784470057	0.4459294069877048	6				NaN	NaN	0	NaN	9039	3501	12539
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12543	33.092	NaN	2501.3	30	0	921.57	0.106	+			16839	HPDVTEPMRF	10	43	614.7927192136787	1227.5708854941572	2	614.7928466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HPDVTEPMRF_	ENSG00000188559|ENST00000202677|RALGAPA2;nc|ENSG00000188559|Q2PPJ7-2|RALGAPA2;nc|ENSG00000188559|Q2PPJ7-3|RALGAPA2;RALGAPA2|p.G1450Dfs*10|1|0.09|ENSG00000188559|chr20:20513020-20513020|C/-|frameshift_variant;RALGAPA2|p.L1495Rfs*46|1|0.07|ENSG00000188559|chr20:20512885-20512885|A/-|frameshift_variant;RALGAPA2|p.S919Afs*24|1|0.29|ENSG00000188559|chr20:20573022-20573022|C/-|frameshift_variant;RALGAPA2|p.Y1040Tfs*3|1|0.35|ENSG00000188559|chr20:20571496-20571496|A/-|frameshift_variant	29.170058357718403	0.6416167986984785	6				NaN	NaN	0	NaN	9040	3501	12539
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12544	33.094	NaN	1146.2	30	0	119.34	0.106				-1	LSVLACYAVS	10	64	541.7811949587631	1081.547836984326	2	541.78125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_LSVLAC(Carbamidomethyl (C))YAVS_	ENST00000544662.1_1_12:132414461-132416977:+|nuORF	40.77816245573522	0.5419747034533848	6				NaN	NaN	0	NaN	9041	3501	12539
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12545	33.096	NaN	3236.1	30	0	609.18	0.106	+			7858	DQYGMLYK	8	64	509.240626515879	NaN	0	509.2420654296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DQYGMLYK_	ENSG00000224470|ENST00000427980|ATXN1L	38.80614096846853	1.7418937515398478	6				NaN	NaN	0	NaN	9042	3501	12539
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12546	33.098	NaN	3133	30	0	734.03	0.034			+	1461	AFGIFNPVA	9	62	468.2548729112014	934.4951928892028	2	468.25469970703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AFGIFNPVA_	REV__tr|U7T3G4|U7T3G4_FUSNUAminobenzoyl-glutamatetransporterOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00266PE=4SV=1	40.5726180659479	0.4135428067754104	6				NaN	NaN	0	NaN	9043	3501	12539
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12562	33.129	NaN	12580	30	0	3583.6	0.214	+			39543	STFSSLVAK	9	71	470.2608851589479	938.5072173846958	2	470.2605285644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STFSSLVAK_	ENST00000529306.5_1_11:502127-506619:-|nuORF	115.49404669440601	0.023927554121326553	6				NaN	NaN	0	NaN	9056	3504	12561
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12563	33.132	NaN	5380.8	30	0	564.69	0.106	+			4551	ATLDLNAVK	9	63	472.77433468701	943.5341164408201	2	472.7738037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATLDLNAVK_	ENSG00000083642|ENST00000315596|PDS5B;ENST00000498550.5_1_13:33222909-33262824:+|nuORF;nc|ENSG00000083642|Q9NTI5-2|PDS5B;nc|ENSG00000083642|Q9NTI5-3|PDS5B;PDS5B|p.G721Dfs*35|1|0.13|ENSG00000083642|chr13:32732132-32732132|A/-|frameshift_variant;PDS5B|p.K1268Rfs*8|1|0.07|ENSG00000083642|chr13:32770296-32770296|A/-|frameshift_variant;PDS5B|p.K1287Rfs*22|1|0.26|ENSG00000083642|chr13:32770351-32770351|A/-|frameshift_variant;PDS5B|p.K693Qfs*8|1|0.11|ENSG00000083642|chr13:32710054-32710055|-/T|frameshift_variant;PDS5B|p.N1390Cfs*12|1|0.44|ENSG00000083642|chr13:32770750-32770751|AA/-|frameshift_variant;PDS5B|p.S1198Vfs*10|1|0.28|ENSG00000083642|chr13:32764556-32764556|A/-|frameshift_variant	75.04331003522576	0.118981335847003	6				NaN	NaN	0	NaN	9057	3504	12561
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12564	33.134	NaN	4286.8	30	0	474.05	0.106	+			23472	LAESIKPA	8	56	414.7448678548645	827.475182776529	2	414.7448425292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LAESIKPA_	ENSG00000103522|ENST00000337929|IL21R;IL21R|p.G360Afs*20|1|0.12|ENSG00000103522|chr16:27448740-27448740|G/-|frameshift_variant;IL21R|p.P123Lfs*4|1|0.23|ENSG00000103522|chr16:27442973-27442973|C/-|frameshift_variant	82.30502934623384	0.30436709589983096	6				NaN	NaN	0	NaN	9058	3504	12561
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12565	33.136	NaN	5357.1	30	0	1358.8	0.106	+			32282	QTMESVNLMK	10	64	590.7889644520034	1179.5633759708066	2	590.7884521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QTMESVNLMK_	ENSG00000158006|ENST00000374282|PAFAH2	68.84614121027924	0.2867470276772903	6				NaN	NaN	0	NaN	9059	3504	12561
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12566	33.138	NaN	3425.3	30	0	724.5	0.106	+			37669	SLRIMNAL	8	58	459.26725303760117	916.5199531420024	2	459.2663879394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SLRIMNAL_	ENSG00000131018|ENST00000367255|SYNE1;ENST00000490135.6_1_6:152637953-152655276:-|nuORF;nc|ENSG00000131018|Q8NF91-4|SYNE1;nc|ENSG00000131018|Q8NF91-7|SYNE1;SYNE1|p.E5862Gfs*83|1|0.12|ENSG00000131018|chr6:152300729-152300738|CCAGACTCCT/-|frameshift_variant;SYNE1|p.G6773Wfs*7|1|0.44|ENSG00000131018|chr6:152236186-152236187|-/A|frameshift_variant;SYNE1|p.K6871Rfs*22|2|0.52|ENSG00000131018|chr6:152233881-152233881|T/-|frameshift_variant;SYNE1|p.L8283Pfs*8|1|0.19|ENSG00000131018|chr6:152148173-152148174|-/G|frameshift_variant;SYNE1|p.M5602Nfs*13|2|0.32|ENSG00000131018|chr6:152310779-152310780|-/T|frameshift_variant;SYNE1|p.S4936Y|1|0.08|ENSG00000131018|chr6:152329878-152329878|G/T|missense_variant;SYNE1|p.V8635Sfs*12|1|0.15|ENSG00000131018|chr6:152133375-152133375|T/-|frameshift_variant	47.91560031466742	0.6071945918984287	6				NaN	NaN	0	NaN	9060	3504	12561
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12567	33.14	NaN	7474.2	30	0	2057	0.106	+			8291	EAIKILKGEY	10	76	582.3378000133288	1162.6610470934575	2	582.3382568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EAIKILKGEY_	ENSG00000079785|ENST00000233084|DDX1;ENST00000470674.1_1_2:15763561-15768670:+|nuORF;nc|ENSG00000079785|Q92499-2|DDX1;nc|ENSG00000079785|Q92499-3|DDX1	155.5333702123263	0.007513046059728936	6				NaN	NaN	0	NaN	9061	3504	12561
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12568	33.141	NaN	1947	30	0	285.45	0.033			+	24479	LGGNAVVLL	9	59	428.26891452682656	854.5232761204531	2	428.2688293457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LGGNAVVLL_	REV__ENSG00000237388|ENST00000446524|OR4A47;REV__nc|ENSG00000254769|Q8NGN8|OR4A4P;REV__OR4A47|p.A204T|1|0.07|ENSG00000237388|chr11:48489402-48489402|G/A|missense_variant	45.9519527083369	0.35044536499095585	6				NaN	NaN	0	NaN	9062	3504	12561
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12586	33.177	NaN	283240	30	0	48230	0.131	+			44275	TSALPIIQK	9	88	485.8003684265536	969.5861839199072	2	485.8002014160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSALPIIQK_	ENSG00000147872|ENST00000276914|PLIN2;ENST00000472715.1_1_9:19126103-19127487:-|nuORF;ENST00000475923.1_1_9:19126103-19126313:-|nuORF;PLIN2|p.V348*|1|0.15|ENSG00000147872|chr9:19116520-19116520|C/-|frameshift_variant	127.46168284122857	0.016682644177004526	6				NaN	NaN	0	NaN	9077	3507	12585
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12587	33.18	NaN	20367	30	0	5822.4	0.106	+			46464	VETAKVYQL	9	80	525.7954837789271	1049.576414624654	2	525.7955932617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VETAKVYQL_	ENSG00000137815|ENST00000389629|RTF1;RTF1|p.D528Ifs*12|1|0.29|ENSG00000137815|chr15:41477182-41477182|G/-|frameshift_variant	101.25262130126117	0.03792372629710479	6				NaN	NaN	0	NaN	9078	3507	12585
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12588	33.182	NaN	5129.5	30	0	1240.7	0.106	+			17232	HVLEAQDLIAK	11	79	618.8512575913761	1235.6879622495521	2	618.8511352539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HVLEAQDLIAK_	ENSG00000139641|ENST00000394048|ESYT1;nc|ENSG00000139641|Q9BSJ8-2|ESYT1	150.15188659993407	7.025925813289175E-05	6				NaN	NaN	0	NaN	9079	3507	12585
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12589	33.184	NaN	6440.7	30	0	1221.6	0.106	+			28840	NPSGNLTETY	10	67	548.2517223138613	1094.4888916945224	2	548.2515258789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NPSGNLTETY_	ENSG00000196924|ENST00000369850|FLNA;FLNA|p.G2237Efs*109|1|0.28|ENSG00000196924|chrX:154352240-154352240|C/-|frameshift_variant;FLNA|p.Q1716Sfs*23|2|0.38|ENSG00000196924|chrX:154354896-154354896|G/-|frameshift_variant;FLNA|p.R2520Vfs*16|1|0.7|ENSG00000196924|chrX:154349560-154349560|G/-|frameshift_variant;nc|ENSG00000196924|P21333-2|FLNA	107.00750918261382	0.05688644658934505	6				NaN	NaN	0	NaN	9080	3507	12585
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12590	33.185	NaN	2709.9	30	0	206.66	0.106	+			8750	EEFRASEL	8	64	490.7380383266601	979.4615237201202	2	490.7378234863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EEFRASEL_	AQR|p.K1234Sfs*17|1|0.35|ENSG00000021776|chr15:34870819-34870819|T/-|frameshift_variant;ENSG00000021776|ENST00000156471|AQR;ENST00000543879.6_1_15:35166876-35196659:-|nuORF	63.30626980617807	0.4690498839812213	6				NaN	NaN	0	NaN	9081	3507	12585
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12591	33.187	NaN	6568.2	30	0	1680.2	0.106	+			4630	ATLPDLKTMEK	11	50	416.22869512716676	1245.6642559817003	3	416.2286376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATLPDLKTMEK_	ENSG00000129566|ENST00000262715|TEP1;nc|ENSG00000129566|Q99973-2|TEP1;TEP1|p.K1597Sfs*14|1|0.27|ENSG00000129566|chr14:20380448-20380448|T/-|frameshift_variant;TEP1|p.L888Wfs*31|1|0.45|ENSG00000129566|chr14:20387928-20387928|G/-|frameshift_variant;TEP1|p.N507Efs*11|1|0.29|ENSG00000129566|chr14:20401014-20401015|-/C|frameshift_variant;TEP1|p.R392Afs*22|1|0.27|ENSG00000129566|chr14:20403743-20403743|G/-|frameshift_variant;TEP1|p.V1856Lfs*45|3|0.41|ENSG00000129566|chr14:20378179-20378179|C/-|frameshift_variant	43.650786325866115	0.5079891456189096	6				NaN	NaN	0	NaN	9082	3507	12585
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12592	33.189	NaN	4275.3	30	0	385.84	0.035				-1	IPIADMAEH	9	72	506.742148405584	1011.469743877968	2	506.7423400878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_IPIADM(Oxidation (M))AEH_	ENSG00000105426|ENST00000262963|PTPRS;ENST00000588552.5_1_19:5159112-5286160:-|nuORF;nc|ENSG00000105426|Q13332-2|PTPRS;nc|ENSG00000105426|Q13332-3|PTPRS;nc|ENSG00000105426|Q13332-4|PTPRS;nc|ENSG00000105426|Q13332-5|PTPRS;nc|ENSG00000105426|Q13332-6|PTPRS;nc|ENSG00000105426|Q13332-7|PTPRS;PTPRS|p.T1382M|1|0.39|ENSG00000105426|chr19:5215547-5215547|G/A|missense_variant	50.0245360154114	0.3026755932229825	6				NaN	NaN	0	NaN	9083	3507	12585
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12610	33.225	NaN	3563.8	30	0	676.68	0.215	+			5706	AVFEETLEK	9	59	533.2782452596015	1064.5419375860029	2	533.2777099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVFEETLEK_	ENSG00000171204|ENST00000358867|TMEM126B;nc|ENSG00000171204|Q8IUX1-2|TMEM126B;nc|ENSG00000171204|Q8IUX1-5|TMEM126B	72.87924865735499	0.12833875048249987	6				NaN	NaN	0	NaN	9098	3510	12609
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12611	33.229	NaN	7608.1	30	0	4495.3	0.106	+			35506	SATTSPFFK	9	55	493.25403267992806	984.4935124266561	2	493.2528381347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SATTSPFFK_	ENSG00000133961|ENST00000555238|NUMB;nc|ENSG00000133961|P49757-2|NUMB;nc|ENSG00000133961|P49757-3|NUMB;nc|ENSG00000133961|P49757-4|NUMB;nc|ENSG00000133961|P49757-5|NUMB;nc|ENSG00000133961|P49757-6|NUMB;nc|ENSG00000133961|P49757-7|NUMB;nc|ENSG00000133961|P49757-8|NUMB;nc|ENSG00000133961|P49757-9|NUMB	51.19269402634007	0.2889735674168909	6				NaN	NaN	0	NaN	9099	3510	12609
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12612	33.231	NaN	1554.4	30	0	151.74	0.106	+			23277	KYLESVKPF	9	67	555.8131169872278	1109.6116810412555	2	556.3152465820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KYLESVKPF_	CROT|p.R78Kfs*34|1|0.31|ENSG00000005469|chr7:87359317-87359318|-/A|frameshift_variant;ENSG00000005469|ENST00000331536|CROT;nc|ENSG00000005469|Q9UKG9-2|CROT	49.536043120802724	0.308405419312776	6				NaN	NaN	0	NaN	9100	3510	12609
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12613	33.233	NaN	4609.5	30	0	1238.8	0.106			+	-1	FSNKMFAEPI	10	54	400.5296761864898	1198.5671991596694	3	400.5291748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_FSNKM(Oxidation (M))FAEPI_	REV__nc|ENSG00000121380|Q9BZR8-3|BCL2L14	35.15202426646627	0.5927656479315102	6				NaN	NaN	0	NaN	9101	3510	12609
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12614	33.234	NaN	2599.7	30	0	511.9	0.106			+	18995	IVVAGELPH	9	56	467.7717372908079	933.5289216484158	2	467.7710266113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IVVAGELPH_	REV__ALCAM|p.G535Wfs*33|1|0.3|ENSG00000170017|chr3:105552521-105552522|-/T|frameshift_variant;REV__ENSG00000170017|ENST00000306107|ALCAM;REV__ENST00000481337.5_1_3:105238990-105260608:+|nuORF;REV__nc|ENSG00000170017|Q13740-2|ALCAM	33.51558372728122	0.4900267029546261	6				NaN	NaN	0	NaN	9102	3510	12609
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12615	33.236	NaN	3526.4	30	0	1255.5	0.035	+			31346	QITAVILNR	9	66	514.3171297256847	NaN	0	514.3170776367188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QITAVILNR_	ENSG00000113073|ENST00000506757|SLC4A9;nc|ENSG00000113073|Q96Q91-2|SLC4A9;nc|ENSG00000113073|Q96Q91-4|SLC4A9;nc|ENSG00000113073|Q96Q91|SLC4A9;SLC4A9|p.L913Sfs*28|1|0.3|ENSG00000113073|chr5:140371615-140371615|C/-|frameshift_variant	37.81151784470057	0.28666463014928195	6				NaN	NaN	0	NaN	9103	3510	12609
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12616	33.237	NaN	5283.9	30	0	904.75	0.146	+			31053	QEWEAKQEKIK	11	63	472.9208419916786	1415.740696575236	3	473.25482177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QEWEAKQEKIK_	ENSG00000071859|ENST00000393600|FAM50A;ENST00000478509.1_1_X:153674748-153677371:+|nuORF;ENST00000481619.5_1_X:153672624-153677371:+|nuORF	19.626933109386073	0.7785885294877325	6				NaN	NaN	0	NaN	9104	3510	12609
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12634	33.276	NaN	4739.2	30	0	1173.6	0.214			+	-1	NTHKCRCS	8	62	503.2213883774146	1004.4282238216292	2	503.2217102050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_NTHKC(Carbamidomethyl (C))RCS_	REV__SPRY4|p.G272S|1|0.15|ENSG00000187678|chr5:142314295-142314295|C/T|missense_variant	37.15910966729921	0.6739408393984688	6				NaN	NaN	0	NaN	9119	3513	12633
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12635	33.28	NaN	9576.7	30	0	1077.9	0.106	+			36478	SEVSKIVTV	9	78	481.28220189128746	960.5498508493749	2	481.2818908691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEVSKIVTV_	ENSG00000163535|ENST00000357799|SGO2;nc|ENSG00000163535|Q562F6-2|SGO2	58.2462437865262	0.22823408064396822	6				NaN	NaN	0	NaN	9120	3513	12633
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12636	33.282	NaN	6377.1	30	0	1637.9	0.106	+			44635	TTFSSAFCR	9	63	538.7463606116952	NaN	0	538.7465209960938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_TTFSSAFC(Carbamidomethyl (C))R_	ENSG00000164151|ENST00000296564|ICE1;ICE1|p.D1105Rfs*4|1|0.21|ENSG00000164151|chr5:5462639-5462640|-/G|frameshift_variant;ICE1|p.G1104Efs*6|1|0.34|ENSG00000164151|chr5:5462640-5462640|G/-|frameshift_variant;ICE1|p.H1965Afs*55|1|0.29|ENSG00000164151|chr5:5465219-5465220|-/A|frameshift_variant	65.46538089061403	0.1260090208616529	6				NaN	NaN	0	NaN	9121	3513	12633
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12637	33.284	NaN	2128.4	30	0	621.71	0.106			+	45951	VASILSQLG	9	49	444.2640862409571	886.5136195487142	2	444.2640380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VASILSQLG_	REV__ENSG00000149150|ENST00000278426|SLC43A1;REV__nc|ENSG00000149150|O75387-2|SLC43A1	54.776311868738084	0.25715957988447635	6				NaN	NaN	0	NaN	9122	3513	12633
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12638	33.286	NaN	2738.1	30	0	379.74	0.106	+			50469	YAEVGRVL	8	57	453.75604248046875	NaN	0	453.75604248046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YAEVGRVL_	ANKRD17|p.L2249Yfs*84|1|0.34|ENSG00000132466|chr4:73090884-73090884|G/-|frameshift_variant;ENSG00000131503|ENST00000360839|ANKHD1;ENSG00000132466|ENST00000358602|ANKRD17;ENST00000514252.1_1_4:73978989-74017230:-|nuORF;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1;nc|ENSG00000132466|O75179-2|ANKRD17;nc|ENSG00000132466|O75179-6|ANKRD17;nc|ENSG00000132466|O75179-7|ANKRD17	60.97194046774394	1.7418937515398478	6				NaN	NaN	0	NaN	9123	3513	12633
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12639	33.287	NaN	2454.7	30	0	485.46	0.035				-1	IADNWVMF	8	58	506.23250604836755	NaN	0	506.23260498046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_IADNWVM(Oxidation (M))F_	sp|F5HEN8|HELI_HCMVMDNAreplicationhelicaseOS=Humancytomegalovirus(strainMerlin)OX=295027GN=HELIPE=3SV=1;sp|P16736|HELI_HCMVADNAreplicationhelicaseOS=Humancytomegalovirus(strainAD169)OX=10360GN=HELIPE=3SV=1	31.954861631926434	1.7418937515398478	6				NaN	NaN	0	NaN	9124	3513	12633
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12640	33.288	NaN	6947.6	30	0	1031.7	0.138	+			36847	SIFGGAKPV	9	56	438.25335985433594	874.4921667754719	2	438.2532653808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SIFGGAKPV_	ENSG00000063046|ENST00000262056|EIF4B;ENST00000432132.2_1_9:98909238-98910135:+|nuORF;ENST00000432307.1_1_X:110862947-110863739:-|nuORF;nc|ENSG00000063046|P23588-2|EIF4B	56.72105179125745	0.24094814563026265	6				NaN	NaN	0	NaN	9125	3513	12633
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12658	33.327	NaN	4429.3	30	0	1407.1	0.215	+			44958	TVAVPLVGK	9	55	442.284327696462	882.554102459724	2	442.28424072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVAVPLVGK_	ENSG00000136986|ENST00000259512|DERL1;nc|ENSG00000136986|Q9BUN8-2|DERL1	35.61828744233558	0.47037581924408073	6				NaN	NaN	0	NaN	9140	3516	12657
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12659	33.33	NaN	3844.9	30	0	319.06	0.106	+			1790	AIFKDLVGK	9	74	495.8032267596174	989.5919005860349	2	495.802978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AIFKDLVGK_	ENSG00000138182|ENST00000371728|KIF20B;KIF20B|p.N1214Tfs*5|1|0.15|ENSG00000138182|chr10:89738478-89738478|A/-|frameshift_variant;KIF20B|p.R1552Gfs*9|1|0.39|ENSG00000138182|chr10:89758852-89758852|A/-|frameshift_variant;nc|ENSG00000138182|Q96Q89-2|KIF20B;nc|ENSG00000138182|Q96Q89-3|KIF20B;nc|ENSG00000138182|Q96Q89-4|KIF20B	51.19269402634007	0.2889735674168909	6				NaN	NaN	0	NaN	9141	3516	12657
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12660	33.332	NaN	1795.3	30	0	202.32	0.106			+	18499	ISHNQPQGY	9	50	522.248876602997	1042.483200272794	2	522.2486572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ISHNQPQGY_	REV__ENSG00000084710|ENST00000403714|EFR3B;REV__nc|ENSG00000084710|Q9Y2G0-2|EFR3B	47.91560031466742	0.327412564698279	6				NaN	NaN	0	NaN	9142	3516	12657
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12661	33.334	NaN	1796.3	30	0	179.66	0.106	+			16608	HGPGEALAL	9	46	432.73240580081847	863.450258668437	2	432.7323303222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HGPGEALAL_	ENSG00000277150|ENST00000622749|F8A3	33.51558372728122	0.4900267029546261	6				NaN	NaN	0	NaN	9143	3516	12657
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12662	33.336	NaN	3391.7	30	0	621.69	0.106				-1	NYNSFVSCNRK	11	62	463.55074271150653	1387.6303987347196	3	463.5511474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_NYNSFVSC(Carbamidomethyl (C))NRK_	ENSG00000133739|ENST00000360375|LRRCC1;LRRCC1|p.E880Rfs*15|1|0.15|ENSG00000133739|chr8:85138174-85138175|-/A|frameshift_variant;LRRCC1|p.K502Nfs*2|1|0.38|ENSG00000133739|chr8:85129254-85129254|A/-|frameshift_variant;LRRCC1|p.M531Nfs*28|1|0.39|ENSG00000133739|chr8:85129338-85129339|-/A|frameshift_variant;LRRCC1|p.T1013Nfs*7|2|0.2|ENSG00000133739|chr8:85145442-85145443|-/A|frameshift_variant;LRRCC1|p.T599Yfs*2|1|0.16|ENSG00000133739|chr8:85131781-85131782|-/T|frameshift_variant;LRRCC1|p.T701Nfs*8|1|0.21|ENSG00000133739|chr8:85134973-85134974|-/A|frameshift_variant;nc|ENSG00000133739|Q9C099-2|LRRCC1	32.03412808689991	0.6537793186749145	6				NaN	NaN	0	NaN	9144	3516	12657
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12663	33.338	NaN	2969.5	30	0	653.36	0.038			+	-1	ATKDMRSIKL	10	47	393.5579102112004	1177.6519012338013	3	393.5576477050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_ATKDM(Oxidation (M))RSIKL_	REV__ENSG00000077150|ENST00000661543|NFKB2;REV__ENST00000467116.5_1_10:104155716-104158713:+|nuORF;REV__nc|ENSG00000077150|Q00653-3|NFKB2;REV__nc|ENSG00000077150|Q00653-4|NFKB2;REV__NFKB2|p.Y294Ifs*4|1|0.29|ENSG00000077150|chr10:102398406-102398406|C/-|frameshift_variant	29.170058357718403	0.6416167986984785	6				NaN	NaN	0	NaN	9145	3516	12657
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12681	33.375	NaN	13496	30	0	3066.2	0.214	+			36734	SGVSLAALK	9	62	423.25820330314156	844.5018536730831	2	423.2586364746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SGVSLAALK_	ENSG00000124575|ENST00000244534|H1-3;ENSG00000168298|ENST00000304218|H1-4;ENSG00000187837|ENST00000343677|H1-2	88.17693792209575	0.07000514020414955	6				NaN	NaN	0	NaN	9160	3519	12680
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12682	33.379	NaN	2260.1	30	0	430.57	0.106			+	13580	GLVAVSPSSL	10	57	465.2690676116282	928.5235822900564	2	465.26904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GLVAVSPSSL_	REV__ENST00000262238.8_1_14:100746059-100746380:+|nuORF	53.351449002276354	0.42630798468005626	6				NaN	NaN	0	NaN	9161	3519	12680
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12683	33.381	NaN	3360.6	30	0	1312.8	0.106			+	-1	HTFLATCLL	9	68	538.2839992239054	1074.5534455146108	2	538.2855224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_HTFLATC(Carbamidomethyl (C))LL_	REV__SMPD3|p.P65H|1|0.51|ENSG00000103056|chr16:68371988-68371988|G/T|missense_variant	30.503639358989545	0.5181749237905803	6				NaN	NaN	0	NaN	9162	3519	12680
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12684	33.383	NaN	2373.7	30	0	251.61	0.106	+			47655	VSCSVGVLPG	10	64	459.24029168042557	NaN	0	459.2403564453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSCSVGVLPG_	ENST00000258416.7_2_2:233433739-233433853:+|nuORF	47.91560031466742	0.31878035802558913	6				NaN	NaN	0	NaN	9163	3519	12680
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12685	33.385	NaN	7098.7	30	0	2390.1	0.106	+			31859	QPVKSFPTM	9	72	517.7706809362065	1033.526808939213	2	518.2728271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QPVKSFPTM_	ENSG00000164944|ENST00000297591|VIRMA;nc|ENSG00000164944|Q69YN4-2|VIRMA;nc|ENSG00000164944|Q69YN4-3|VIRMA;nc|ENSG00000164944|Q69YN4-4|VIRMA	47.657333605630114	0.33044192980041115	6				NaN	NaN	0	NaN	9164	3519	12680
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12686	33.386	NaN	1955.4	30	0	331.37	0.037	+			49486	VVYTSEMALK	10	55	570.8031627443612	1139.5917725555223	2	570.8025512695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VVYTSEMALK_	CENPE|p.E170K|1|0.27|ENSG00000138778|chr4:103194654-103194654|C/T|missense_variant;CENPE|p.K2291Hfs*13|1|0.04|ENSG00000138778|chr4:103132746-103132747|-/ATTTGTATATG|frameshift_variant;CENPE|p.Q792Hfs*16|1|0.04|ENSG00000138778|chr4:103159235-103159236|-/TCATA|frameshift_variant;CENPE|p.R2080Gfs*3|1|0.3|ENSG00000138778|chr4:103138416-103138416|T/-|frameshift_variant;CENPE|p.S2121Efs*18|1|0.05|ENSG00000138778|chr4:103136302-103136303|-/TGCTC|frameshift_variant;ENSG00000138778|ENST00000265148|CENPE;nc|ENSG00000138778|Q02224-3|CENPE	49.536043120802724	0.461275219792494	6				NaN	NaN	0	NaN	9165	3519	12680
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12687	33.387	NaN	1729.5	30	0	142.73	0.14			+	39197	STAAISDSLR	10	69	510.7719166751034	NaN	0	510.7738342285156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STAAISDSLR_	REV__ENSG00000100815|ENST00000267622|TRIP11;REV__nc|ENSG00000100815|Q15643-2|TRIP11	31.529811441608018	0.39664753963064203	6				NaN	NaN	0	NaN	9166	3519	12680
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12705	33.425	NaN	5229.2	30	0	1007.2	0.215	+			11052	FENKFAVET	9	64	542.7691509487112	1083.5237489642222	2	542.7696533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FENKFAVET_	ARHGEF7-ITM2B|1|fusion;ARHGEF7-ITM2B|2|fusion;ARHGEF7-ITM2B|3|fusion;ARHGEF7-ITM2B|4|fusion;ENSG00000136156|ENST00000647800|ITM2B;nc|ENSG00000136156|Q9Y287-2|ITM2B	51.52775601994872	0.28504342437107444	6				NaN	NaN	0	NaN	9181	3522	12704
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12706	33.429	NaN	3805.9	30	0	577.51	0.106	+			17573	IEALVRTV	8	62	450.7794305788531	NaN	0	450.779296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IEALVRTV_	ENSG00000168036|ENST00000349496|CTNNB1	70.8162118820467	1.7418937515398478	6				NaN	NaN	0	NaN	9182	3522	12704
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12707	33.431	NaN	9447	30	0	1369.3	0.106			+	-1	YEKDLTMSVI	10	57	405.5365076305776	NaN	0	405.5364074707031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_YEKDLTM(Oxidation (M))SVI_	REV__ENSG00000101972|ENST00000371145|STAG2;REV__ENSG00000118007|ENST00000383202|STAG1;REV__nc|ENSG00000101972|Q8N3U4|STAG2;REV__nc|ENSG00000118007|Q8WVM7-2|STAG1;REV__NCK1-STAG1|1|fusion;REV__NCK1-STAG1|2|fusion;REV__STAG1|p.K1087Nfs*3|1|0.3|ENSG00000118007|chr3:136349168-136349168|T/-|frameshift_variant;REV__STAG2|p.T1208Kfs*3|1|0.87|ENSG00000101972|chrX:124095400-124095400|C/-|frameshift_variant	30.568863376406313	0.39980281766270914	6				NaN	NaN	0	NaN	9183	3522	12704
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12708	33.433	NaN	3512.5	30	0	410.57	0.106	+			35818	SEASLHPVL	9	72	476.75844032735387	NaN	0	476.75830078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SEASLHPVL_	ENSG00000136518|ENST00000429709|ACTL6A;nc|ENSG00000136518|O96019-2|ACTL6A	63.30626980617807	0.13521764763214936	6				NaN	NaN	0	NaN	9184	3522	12704
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12709	33.435	NaN	2413.1	30	0	439.79	0.106	+			47101	VLLGSVSGLA	10	59	458.2791021466171	914.5436513600342	2	458.2789001464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VLLGSVSGLA_	ENSG00000183048|ENST00000350690|SLC25A10;ENST00000574129.5_1_17:79680521-79687104:+|nuORF;nc|ENSG00000183048|Q9UBX3-2|SLC25A10	37.15910966729921	0.575322462179216	6				NaN	NaN	0	NaN	9185	3522	12704
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12710	33.437	NaN	3609.6	30	0	818.27	0.038	+			34758	RYFDPANGKF	10	58	607.8013868784158	1213.5882208236314	2	607.8018188476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RYFDPANGKF_	ENSG00000167658|ENST00000309311|EEF2;ENST00000598182.5_1_19:3980752-3982305:-|nuORF	46.45678178249821	0.4896490706773647	6				NaN	NaN	0	NaN	9186	3522	12704
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12711	33.437	NaN	2607.8	30	0	290.36	0.141	+			8815	EELEKSIAV	9	60	509.276500632602	1016.538448332004	2	509.2763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EELEKSIAV_	ENSG00000134602|ENST00000394334|STK26;nc|ENSG00000134602|Q9P289-2|STK26;nc|ENSG00000134602|Q9P289-3|STK26	60.97194046774394	0.20551255781574032	6				NaN	NaN	0	NaN	9187	3522	12704
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12729	33.477	NaN	85922	30	0	27842	0.214	+			37362	SLFGSPVAK	9	80	453.2580000102929	904.5014470873858	2	453.25787353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLFGSPVAK_	ENSG00000186260|ENST00000571589|MRTFB;nc|ENSG00000186260|Q9ULH7-4|MRTFB;nc|ENSG00000186260|Q9ULH7|MRTFB	90.60085204095205	0.06317133949006545	6				NaN	NaN	0	NaN	9202	3525	12728
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12730	33.48	NaN	5595.5	30	0	526.97	0.106	+			30109	PRLFAEEK	8	70	495.27374752637195	988.5329421195439	2	495.27423095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PRLFAEEK_	ENSG00000162896|ENST00000356495|PIGR	66.42927471994793	0.4381325844043345	6				NaN	NaN	0	NaN	9203	3525	12728
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12731	33.482	NaN	4753.4	30	0	822.92	0.106	+			51165	YPDEKSVCL	9	65	555.7600037783634	1109.5054546235267	2	555.760498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_YPDEKSVC(Carbamidomethyl (C))L_	ENSG00000125170|ENST00000340099|DOK4	75.04331003522576	0.118981335847003	6				NaN	NaN	0	NaN	9204	3525	12728
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12732	33.484	NaN	4367.7	30	0	772.03	0.106	+			15327	GTVITSVIK	9	64	459.2866764706855	916.558800008171	2	459.2867431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTVITSVIK_	ENSG00000120690|ENST00000239882|ELF1;nc|ENSG00000120690|P32519-2|ELF1	56.43379154798735	0.2433427591689151	6				NaN	NaN	0	NaN	9205	3525	12728
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12733	33.486	NaN	7226.9	30	0	3089.3	0.106	+			31844	QPSVSLRDF	9	75	524.7746845397475	1047.5348161462948	2	524.7745971679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QPSVSLRDF_	ENSG00000066697|ENST00000395067|MSANTD3;MSANTD3|p.K195Rfs*18|1|0.44|ENSG00000066697|chr9:100450717-100450717|A/-|frameshift_variant;nc|ENSG00000066697|Q96H12-2|MSANTD3	54.776311868738084	0.25715957988447635	6				NaN	NaN	0	NaN	9206	3525	12728
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12734	33.488	NaN	10230	30	0	4893.6	0.038	+			30762	QDPRLFAEEK	10	72	616.817149851048	1231.619746768896	2	616.8170776367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QDPRLFAEEK_	ENSG00000162896|ENST00000356495|PIGR	93.1432384553994	0.11307820852620741	6				NaN	NaN	0	NaN	9207	3525	12728
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12735	33.488	NaN	5100.7	30	0	545.88	0.142	+			28816	NPLAATHEF	9	68	500.24843378270714	998.4823146322143	2	500.2480773925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NPLAATHEF_	ENSG00000100403|ENST00000352645|ZC3H7B;ZC3H7B|p.G531Vfs*13|1|0.19|ENSG00000100403|chr22:41346130-41346130|G/-|frameshift_variant	113.41158876095287	0.025516849225023126	6				NaN	NaN	0	NaN	9208	3525	12728
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12753	33.527	NaN	213920	30	0	107050	0.185	+			32437	QVIGVVLQK	9	91	492.31605421222986	982.6175554912597	2	492.31573486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QVIGVVLQK_	ENST00000297857.3_1_8:124268339-124279533:-|nuORF	207.60370812984166	1.1519309894630272E-06	6				NaN	NaN	0	NaN	9223	3528	12752
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12754	33.53	NaN	33420	30	0	12085	0.106	+			3849	ATALHLHPLL	10	57	362.5524427662192	1084.6354988988576	3	362.5523376464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATALHLHPLL_	ENSG00000186566|ENST00000591680|GPATCH8;nc|ENSG00000186566|Q9UKJ3-2|GPATCH8	36.446750945000026	0.5818864909973037	6				NaN	NaN	0	NaN	9224	3528	12752
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12755	33.532	NaN	12337	30	0	1201.1	0.106	+			44276	TSALPIIQK	9	77	485.8003684265536	969.5861839199072	2	485.7991943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TSALPIIQK_	ENSG00000147872|ENST00000276914|PLIN2;ENST00000472715.1_1_9:19126103-19127487:-|nuORF;ENST00000475923.1_1_9:19126103-19126313:-|nuORF;PLIN2|p.V348*|1|0.15|ENSG00000147872|chr9:19116520-19116520|C/-|frameshift_variant	66.42927471994793	0.16001998865088202	6				NaN	NaN	0	NaN	9225	3528	12752
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12756	33.534	NaN	2834.8	30	0	457.2	0.106	+			19823	KEDLRVLM	8	70	502.28405885895177	1002.5535647847036	2	502.2837219238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEDLRVLM_	ENSG00000197747|ENST00000368811|S100A10;ENST00000478348.1_1_1:151957748-151958706:-|nuORF;ENST00000478574.5_1_1:151956596-151958706:-|nuORF	39.252832667884924	0.6609488554722044	6				NaN	NaN	0	NaN	9226	3528	12752
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12757	33.536	NaN	3391.3	30	0	273.36	0.106	+			33424	RIIEETLALK	10	75	593.3637365372904	1184.7129201413807	2	593.36376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RIIEETLALK_	ENSG00000163466|ENST00000315717|ARPC2;ENST00000465395.5_1_2:219082193-219103574:+|nuORF;ENST00000489598.5_1_2:219082193-219099125:+|nuORF;ENST00000491780.5_1_2:219082193-219100082:+|nuORF	94.4091291819064	0.10583072883246657	6				NaN	NaN	0	NaN	9227	3528	12752
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12758	33.537	NaN	4004.5	30	0	976.78	0.106	+			43161	TETGILKGV	9	64	459.26880919282655	916.5230654524531	2	459.2681579589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TETGILKGV_	ENSG00000133316|ENST00000278856|WDR74;ENST00000453708.6_1_11:62603082-62607042:-|nuORF;ENST00000538277.1_1_11:62603381-62607042:-|nuORF;ENST00000540620.5_1_11:62602715-62607042:-|nuORF;ENST00000541930.5_1_11:62601897-62607060:-|nuORF;nc|ENSG00000133316|Q6RFH5-2|WDR74	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	9228	3528	12752
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12759	33.539	NaN	3587.8	30	0	522.59	0.036	+			25489	LPSELERSY	9	66	547.2799163604881	NaN	0	547.2797241210938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LPSELERSY_	ENSG00000055130|ENST00000325222|CUL1	101.45984612302182	0.018494728971010316	6				NaN	NaN	0	NaN	9229	3528	12752
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12777	33.576	NaN	35862	30	0	4062.1	0.214	+			42667	TAVTVNQSL	9	76	466.7559690551972	931.4973851771945	2	466.755615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAVTVNQSL_	CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000425226.1_1_2:203706028-203706388:-|nuORF;ENST00000550170.5_1_12:53294858-53298765:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	172.24860141594272	0.002383092361811508	6				NaN	NaN	0	NaN	9244	3531	12776
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12778	33.579	NaN	17097	30	0	3646.7	0.106	+			33729	RPHTTRARC	9	46	366.52940406957737	1096.566382808932	3	366.5292663574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RPHTTRARC_	ENST00000576225.5_1_17:79058928-79084738:+|nuORF	37.15910966729921	0.4535818937225704	6				NaN	NaN	0	NaN	9245	3531	12776
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12779	33.582	NaN	11666	30	0	1432.5	0.106	+			44872	TTVESLIQK	9	82	509.79266393967333	NaN	0	509.7924499511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TTVESLIQK_	ENSG00000157107|ENST00000430046|FCHO2;nc|ENSG00000157107|Q0JRZ9-2|FCHO2;nc|ENSG00000157107|Q0JRZ9-3|FCHO2	145.15565482312357	0.0012548246736834398	6				NaN	NaN	0	NaN	9246	3531	12776
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12780	33.583	NaN	6738.8	30	0	520.34	0.106			+	21124	KKSFSIKK	8	84	483.31081801758415	964.6070831019683	2	483.31085205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KKSFSIKK_	REV__ENSG00000163629|ENST00000411767|PTPN13;REV__nc|ENSG00000163629|Q12923-2|PTPN13;REV__nc|ENSG00000163629|Q12923-3|PTPN13;REV__nc|ENSG00000163629|Q12923-4|PTPN13;REV__PTPN13|p.K1535Sfs*16|1|0.38|ENSG00000163629|chr4:86769879-86769879|A/-|frameshift_variant;REV__PTPN13|p.N1374Mfs*7|1|0.15|ENSG00000163629|chr4:86764692-86764692|A/-|frameshift_variant;REV__PTPN13|p.T2330Qfs*13|1|0.12|ENSG00000163629|chr4:86807799-86807799|A/-|frameshift_variant	39.252832667884924	0.6609488554722044	6				NaN	NaN	0	NaN	9247	3531	12776
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12781	33.585	NaN	5080.1	30	0	790.74	0.106			+	-1	VISLPCAAGF	10	65	517.7706809362065	1033.526808939213	2	518.272216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_VISLPC(Carbamidomethyl (C))AAGF_	REV__ENSG00000158125|ENST00000379416|XDH;REV__XDH|p.P555Qfs*67|1|0.27|ENSG00000158125|chr2:31373895-31373895|G/-|frameshift_variant;REV__XDH|p.Q919Rfs*10|1|0.37|ENSG00000158125|chr2:31350104-31350104|C/-|frameshift_variant;REV__XDH|p.T311Nfs*8|1|0.17|ENSG00000158125|chr2:31383107-31383108|-/T|frameshift_variant	21.9598887501803	0.7004979571547932	6				NaN	NaN	0	NaN	9248	3531	12776
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12782	33.587	NaN	5717.1	30	0	531.58	0.034	+			12330	GDISAVQPK	9	62	457.7508127573146	913.4870725814292	2	457.75018310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GDISAVQPK_	ENSG00000109618|ENST00000382103|SEPSECS;nc|ENSG00000109618|Q9HD40-3|SEPSECS	58.78195531508484	0.22376836668196862	6				NaN	NaN	0	NaN	9249	3531	12776
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12783	33.588	NaN	1716.5	30	0	162.78	0.142			+	19399	KANNSLQSFY	10	57	586.2910813036121	1170.5676096740242	2	586.290771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KANNSLQSFY_	REV__ENSG00000110244|ENST00000357780|APOA4	54.722347961057174	0.4138398245444204	6				NaN	NaN	0	NaN	9250	3531	12776
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12801	33.627	NaN	34636	30	0	13831	0.214	+			21341	KLWEEDRLAKE	11	78	472.9208419916786	1415.740696575236	3	472.9206848144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KLWEEDRLAKE_	ENSG00000172361|ENST00000398545|CFAP53	28.383774762235813	0.6920685480603629	6				NaN	NaN	0	NaN	9265	3534	12800
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12802	33.63	NaN	19278	30	0	6870.2	0.106	+			26573	LTTEVHPEL	9	75	519.7769099196956	1037.5392669061912	2	519.7770385742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LTTEVHPEL_	ENSG00000125991|ENST00000348547|ERGIC3;ENST00000486268.5_1_20:34129846-34130758:+|nuORF;nc|ENSG00000125991|Q9Y282-2|ERGIC3;nc|ENSG00000125991|Q9Y282-3|ERGIC3	116.90359126533652	0.02307425081617795	6				NaN	NaN	0	NaN	9266	3534	12800
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12803	33.632	NaN	22209	30	0	3837.5	0.106	+			48863	VVCVEGIVTK	10	76	552.3098120309271	1102.6050711286541	2	552.3104248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_VVC(Carbamidomethyl (C))VEGIVTK_	ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3	140.11223852658463	0.010724162804194332	6				NaN	NaN	0	NaN	9267	3534	12800
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12804	33.634	NaN	5714.7	30	0	722.67	0.106	+			17556	IDVKVTSM	8	69	446.7440835770276	891.4736142208552	2	446.7439270019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IDVKVTSM_	ENSG00000151176|ENST00000280800|PLBD2;nc|ENSG00000151176|Q8NHP8-2|PLBD2	95.81516180277367	0.2598660847282228	6				NaN	NaN	0	NaN	9268	3534	12800
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12805	33.636	NaN	2618.6	30	0	394.5	0.106			+	25122	LLQGPSQPG	9	55	448.745090125227	895.4756273172541	2	448.74530029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LLQGPSQPG_	REV__ENSG00000185798|ENST00000332629|WDR53	42.396135135203025	0.392153681582562	6				NaN	NaN	0	NaN	9269	3534	12800
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12806	33.638	NaN	4145.8	30	0	929.69	0.035	+			28723	NNMLVVIW	8	65	494.7688820198725	NaN	0	494.7691955566406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NNMLVVIW_	ENST00000370872.7_1_1:75171713-75171794:-|nuORF	39.021493756699265	1.7418937515398478	6				NaN	NaN	0	NaN	9270	3534	12800
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12807	33.638	NaN	2543.5	30	0	815.25	0.14	+			23849	LDAYPILNQ	9	58	523.7777887941461	1045.541024655092	2	523.7783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LDAYPILNQ_	ENSG00000005884|ENST00000320031|ITGA3;ENST00000505306.5_1_17:48133647-48154208:+|nuORF;nc|ENSG00000005884|P26006-1|ITGA3	34.172542307311794	0.4838870758800184	6				NaN	NaN	0	NaN	9271	3534	12800
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12825	33.677	NaN	34143	30	0	13417	0.214	+			44959	TVAVPLVGK	9	70	442.284327696462	882.554102459724	2	442.2840270996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVAVPLVGK_	ENSG00000136986|ENST00000259512|DERL1;nc|ENSG00000136986|Q9BUN8-2|DERL1	74.25504064058377	0.12238981753128622	6				NaN	NaN	0	NaN	9286	3537	12824
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12826	33.681	NaN	6171	30	0	1150.6	0.106			+	11283	FKDTSLVPL	9	74	510.2924822465863	1018.5704115599726	2	510.29248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FKDTSLVPL_	REV__ENSG00000168090|ENST00000303904|COPS6	44.377184641726394	0.36891676396732553	6				NaN	NaN	0	NaN	9287	3537	12824
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12827	33.683	NaN	2559.9	30	0	212.34	0.106	+			28977	NSIGAIVSGP	10	55	457.7508127573146	913.4870725814292	2	457.75042724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NSIGAIVSGP_	CDON|p.A250Hfs*35|1|0.06|ENSG00000064309|chr11:126017269-126017270|-/CTGTAACCTTGGAGTGTGT|frameshift_variant;CDON|p.P586Hfs*28|1|0.1|ENSG00000064309|chr11:126005853-126005853|G/-|frameshift_variant;CDON|p.S478Wfs*25|1|0.53|ENSG00000064309|chr11:126010453-126010460|AGCTTGGG/-|frameshift_variant;CDON|p.S875Rfs*8|1|0.36|ENSG00000064309|chr11:125994309-125994309|A/-|frameshift_variant;ENSG00000064309|ENST00000531738|CDON;ENST00000525625.1_1_11:125884983-125893371:-|nuORF;nc|ENSG00000064309|Q4KMG0|CDON	47.657333605630114	0.47858658696240314	6				NaN	NaN	0	NaN	9288	3537	12824
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12828	33.684	NaN	5428.7	30	0	1187	0.106	+			40770	SVDKSVIVY	9	66	505.2821676480751	1008.5497823629502	2	505.2816162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVDKSVIVY_	ENSG00000196151|ENST00000359774|WDSUB1	52.936696900407355	0.27249468807391813	6				NaN	NaN	0	NaN	9289	3537	12824
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12829	33.686	NaN	2826.3	30	0	626.28	0.106	+			41051	SVIELTCTK	9	58	497.26810759012517	992.5216622470504	2	497.2678527832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVIELTCTK_	ENSG00000197081|ENST00000356956|IGF2R;IGF2R|p.A2088T|1|0.28|ENSG00000197081|chr6:160088089-160088089|G/A|missense_variant;IGF2R|p.D2163Tfs*2|1|0.16|ENSG00000197081|chr6:160089932-160089932|G/-|frameshift_variant;IGF2R|p.G2426Efs*10|1|0.25|ENSG00000197081|chr6:160104882-160104882|G/-|frameshift_variant	47.95952297671804	0.32689736945648856	6				NaN	NaN	0	NaN	9290	3537	12824
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12830	33.688	NaN	2984.7	30	0	416.94	0.106	+			37959	SPFYPGKTTY	10	66	580.7854576851471	1159.556362437094	2	580.7850952148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SPFYPGKTTY_	ENSG00000124789|ENST00000262077|NUP153;nc|ENSG00000124789|P49790-2|NUP153;nc|ENSG00000124789|P49790-3|NUP153;NUP153|p.E1073Kfs*44|1|0.07|ENSG00000124789|chr6:17628983-17628983|T/-|frameshift_variant;NUP153|p.N411Ifs*2|1|0.17|ENSG00000124789|chr6:17662054-17662054|T/-|frameshift_variant;NUP153|p.S359Ffs*14|1|0.09|ENSG00000124789|chr6:17665380-17665381|-/TAGATAAGAAG|frameshift_variant;NUP153|p.T480Qfs*8|1|0.1|ENSG00000124789|chr6:17649257-17649258|GT/-|frameshift_variant	70.8162118820467	0.27065172005956	6				NaN	NaN	0	NaN	9291	3537	12824
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12831	33.69	NaN	2548.5	30	0	717.9	0.036	+			4186	ATFMEVLTK	9	54	528.2757981829494	1054.5370434326987	2	528.2762451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_ATFM(Oxidation (M))EVLTK_	ENSG00000196712|ENST00000358273|NF1;ENST00000493220.5_2_17:29556858-29657521:+|nuORF;ENST00000495910.6_1_17:29490228-29576996:+|nuORF;nc|ENSG00000196712|P21359-2|NF1;nc|ENSG00000196712|P21359-4|NF1;nc|ENSG00000196712|P21359-6|NF1;NF1|p.F2429Qfs*7|1|0.17|ENSG00000196712|chr17:31349214-31349215|-/CAAGTAAGAATTAATT|frameshift_variant;NF1|p.K1386Rfs*20|1|0.33|ENSG00000196712|chr17:31252978-31252978|A/-|frameshift_variant	75.04331003522576	0.118981335847003	6				NaN	NaN	0	NaN	9292	3537	12824
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12850	33.726	NaN	6360.8	30	0	2819.8	0.215			+	37198	SKDPLVCNE	9	70	502.7397958434634	1003.4650387537268	2	502.7391662597656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SKDPLVCNE_	REV__ENSG00000185313|ENST00000449082|SCN10A	44.377184641726394	0.36891676396732553	6				NaN	NaN	0	NaN	9308	3540	12849
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12851	33.729	NaN	4674.7	30	0	953.05	0.106	+			25358	LPFSSHTY	8	63	476.232740904456	950.4509288757121	2	476.2319030761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LPFSSHTY_	ENSG00000178974|ENST00000313833|FBXO34;FBXO34|p.L485Cfs*13|1|0.39|ENSG00000178974|chr14:55351837-55351837|T/-|frameshift_variant	101.21157088398209	0.2500103534009131	6				NaN	NaN	0	NaN	9309	3540	12849
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12852	33.731	NaN	2948.1	30	0	423.79	0.106	+			27666	MPSSAVRVL	9	58	480.2708512179998	958.5271495027996	2	480.2705993652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MPSSAVRVL_	ENSG00000144451|ENST00000331683|SPAG16;ENST00000413312.5_1_2:214149168-214161993:+|nuORF;nc|ENSG00000144451|Q8N0X2-4|SPAG16;nc|ENSG00000144451|Q8N0X2-5|SPAG16;SPAG16|p.F348Lfs*8|1|0.2|ENSG00000144451|chr2:213490060-213490060|T/-|frameshift_variant;SPAG16|p.N166Rfs*6|1|0.15|ENSG00000144451|chr2:213317316-213317317|-/GGGTTTATATC|frameshift_variant;SPAG16|p.N207Tfs*3|1|0.37|ENSG00000144451|chr2:213340240-213340240|A/-|frameshift_variant	77.31757898189308	0.1091473830098891	6				NaN	NaN	0	NaN	9310	3540	12849
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12853	33.733	NaN	2827.5	30	0	483.06	0.106	+			27628	MPQGAPRLY	9	65	516.7686698274066	1031.522786721613	2	516.7688598632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MPQGAPRLY_	ENSG00000124126|ENST00000371941|PREX1;ENST00000482556.5_1_20:47242425-47249020:-|nuORF;nc|ENSG00000124126|Q8TCU6-2|PREX1	53.351449002276354	0.2690372970092375	6				NaN	NaN	0	NaN	9311	3540	12849
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12854	33.735	NaN	2754.6	30	0	516.77	0.106			+	25767	LSAKCRVPSF	10	44	369.8697532776301	1106.5874304330903	3	369.86956787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSAKCRVPSF_	REV__ENST00000430479.5_1_7:14029049-14029246:-|nuORF	37.81151784470057	0.569310847604193	6				NaN	NaN	0	NaN	9312	3540	12849
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12855	33.737	NaN	4075.9	30	0	720.04	0.106	+			10601	EYLTAEILE	9	69	540.7774529508257	1079.5403529684513	2	540.77734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EYLTAEILE_	ENSG00000113648|ENST00000511689|MACROH2A1;ENSG00000164508|ENST00000297012|H2AC1;ENSG00000180573|ENST00000377791|H2AC6;ENSG00000181218|ENST00000689584|H2AC25;ENSG00000184260|ENST00000331380|H2AC20;ENSG00000184270|ENST00000331128|H2AC21;ENSG00000188486|ENST00000530167|H2AX;ENSG00000196747|ENST00000358739|H2AC13;ENSG00000196787|ENST00000359193|H2AC11;ENSG00000196866|ENST00000341023|H2AC7;ENSG00000246705|ENST00000544848|H2AJ;ENSG00000274997|ENST00000377459|H2AC12;ENSG00000276368|ENST00000333151|H2AC14;ENSG00000276903|ENST00000613174|H2AC16;ENSG00000277075|ENST00000303910|H2AC8;ENSG00000278463|ENST00000615868|H2AC4;ENSG00000278677|ENST00000359611|H2AC17;ENST00000360597.8_1_5:134681666-134724783:-|nuORF;ENST00000479986.1_1_6:27858584-27860837:-|nuORF;ENST00000506532.5_1_5:134705062-134724783:-|nuORF;ENST00000513210.5_1_5:134695623-134724711:-|nuORF;nc|ENSG00000113648|O75367-3|MACROH2A1;nc|ENSG00000113648|O75367|MACROH2A1;nc|ENSG00000246705|Q9BTM1-2|H2AJ;nc|ENSG00000288859|Q6FI13|H2AC18	51.33545320467046	0.2872990594074956	6				NaN	NaN	0	NaN	9313	3540	12849
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12856	33.739	NaN	1134.2	30	0	177.06	0.039	+			43608	TIMPKDIQLAR	11	48	643.3686358294862	1284.7227187257722	2	643.3687744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TIMPKDIQLAR_	ENSG00000132475|ENST00000254810|H3-3B;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000168148|ENST00000366696|H3-4;ENSG00000183598|ENST00000331491|H3C13;ENSG00000188375|ENST00000340398|H3-5;ENSG00000197153|ENST00000359303|H3C12;ENSG00000197409|ENST00000356476|H3C4;ENSG00000203811|ENST00000369158|H3C14;ENSG00000203852|ENST00000403683|H3C15;ENSG00000273983|ENST00000614378|H3C8;ENSG00000274750|ENST00000614911|H3C6;ENSG00000275379|ENST00000616365|H3C11;ENSG00000275714|ENST00000613854|H3C1;ENSG00000277775|ENST00000618052|H3C7;ENSG00000278828|ENST00000685041|H3C10;ENST00000404612.1_1_6:26322106-26322214:-|nuORF;ENST00000593254.1_1_17:73774678-73775846:-|nuORF	51.52775601994872	0.4002081502334604	6				NaN	NaN	0	NaN	9314	3540	12849
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12867	33.761	NaN	15433	30	0	2834.4	0.214	+			42561	TASESSYQL	9	89	493.2278367101954	984.4411204871908	2	493.22723388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TASESSYQL_	ENSG00000137501|ENST00000359152|SYTL2;nc|ENSG00000137501|Q9HCH5-12|SYTL2;nc|ENSG00000137501|Q9HCH5-13|SYTL2;nc|ENSG00000137501|Q9HCH5-14|SYTL2;nc|ENSG00000137501|Q9HCH5-2|SYTL2;nc|ENSG00000137501|Q9HCH5-7|SYTL2;nc|ENSG00000137501|Q9HCH5-8|SYTL2;nc|ENSG00000137501|Q9HCH5-9|SYTL2;nc|ENSG00000137501|Q9HCH5|SYTL2;SYTL2|p.Q663Tfs*35|1|0.14|ENSG00000137501|chr11:85709344-85709345|-/T|frameshift_variant	132.757866228626	0.013877640931359021	6				NaN	NaN	0	NaN	9322	3543	12866
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12868	33.765	NaN	9620.3	30	0	1347	0.106	+			7158	DAFKASVY	8	73	450.72698107291853	899.4394092126371	2	450.72662353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DAFKASVY_	ENSG00000163029|ENST00000448223|SMC6;nc|ENSG00000163029|Q96SB8-2|SMC6;SMC6|p.D983Lfs*3|1|0.06|ENSG00000163029|chr2:17670539-17670540|-/AG|frameshift_variant	93.19546047674547	0.2677966331495483	6				NaN	NaN	0	NaN	9323	3543	12866
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12869	33.767	NaN	6441.5	30	0	347.63	0.106	+			16287	HEGLVLTKL	9	79	505.3060645023369	1008.5975760714738	2	505.3057861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HEGLVLTKL_	ENSG00000149932|ENST00000279396|TMEM219	80.45461616416974	0.09558281504443908	6				NaN	NaN	0	NaN	9324	3543	12866
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12870	33.769	NaN	5411.1	30	0	2640.3	0.106	+			10854	FATIKSASL	9	52	469.27168743012834	936.5288219270567	2	469.2713928222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FATIKSASL_	ENSG00000135090|ENST00000392533|TAOK3	45.02220120713402	0.3613509778819777	6				NaN	NaN	0	NaN	9325	3543	12866
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12871	33.771	NaN	1940	30	0	243.33	0.106	+			1502	AFVMGLSVIGS	11	65	548.7890703344091	NaN	0	548.7891845703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_AFVM(Oxidation (M))GLSVIGS_	ENSG00000134640|ENST00000257068|MTNR1B	49.44154591367651	0.3193297569249391	6				NaN	NaN	0	NaN	9326	3543	12866
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12872	33.772	NaN	2238.3	30	0	255.78	0.036			+	13335	GKPSSALSLSQ	11	60	537.7912062827016	NaN	0	537.7916259765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GKPSSALSLSQ_	REV__CDC25A|p.G469Dfs*7|1|0.3|ENSG00000164045|chr3:48159372-48159372|C/-|frameshift_variant;REV__ENSG00000164045|ENST00000302506|CDC25A;REV__nc|ENSG00000164045|P30304-2|CDC25A	37.50817390946774	0.39825797133360086	6				NaN	NaN	0	NaN	9327	3543	12866
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12885	33.797	NaN	5272.3	30	0	636.03	0.214	+			48053	VSSIVVNIT	9	69	466.276476223998	930.538399514796	2	466.276611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSSIVVNIT_	ENSG00000261371|ENST00000563924|PECAM1;nc|ENSG00000261371|P16284-2|PECAM1;nc|ENSG00000261371|P16284-3|PECAM1;nc|ENSG00000261371|P16284-4|PECAM1;nc|ENSG00000261371|P16284-5|PECAM1;nc|ENSG00000261371|P16284-6|PECAM1	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	9337	3546	12884
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12886	33.801	NaN	4483.4	30	0	762.5	0.106			+	23901	LDKKNVSND	9	66	516.7686698274066	1031.522786721613	2	517.2696533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LDKKNVSND_	REV__ENSG00000198146|ENST00000356321|ZNF770;REV__ZNF770|p.L495Sfs*10|1|0.15|ENSG00000198146|chr15:34981947-34981951|AATTA/-|frameshift_variant;REV__ZNF770|p.S441P|2|0.32|ENSG00000198146|chr15:34982114-34982114|A/G|missense_variant	80.45461616416974	0.09558281504443908	6				NaN	NaN	0	NaN	9338	3546	12884
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12887	33.803	NaN	2499.5	30	0	407.82	0.106			+	17994	IHVITNPY	8	61	478.7625192571581	955.5104855811162	2	478.76416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IHVITNPY_	REV__CACNA1B|p.D1073Y|1|0.31|ENSG00000148408|chr9:138025103-138025103|G/T|missense_variant	44.53106598305862	0.628196326904373	6				NaN	NaN	0	NaN	9339	3546	12884
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12888	33.805	NaN	7021.6	30	0	1061.5	0.106	+			28411	NESSVLHTL	9	76	500.2593080616025	998.504063190005	2	500.25933837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NESSVLHTL_	ENSG00000196535|ENST00000527372|MYO18A;nc|ENSG00000196535|Q92614-2|MYO18A;nc|ENSG00000196535|Q92614-3|MYO18A;nc|ENSG00000196535|Q92614-4|MYO18A	109.47833844074708	0.029530294723441826	6				NaN	NaN	0	NaN	9340	3546	12884
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12889	33.806	NaN	1974.2	30	0	254.85	0.035			+	-1	CPGLSCAALVG	11	56	524.254050244885	NaN	0	524.25439453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_CPGLSC(Carbamidomethyl (C))AALVG_	REV__ENST00000257863.8_2_12:53819491-53822698:+|nuORF;REV__ENST00000552233.5_1_12:53819491-53823243:+|nuORF	29.14955571784316	0.43550879202308607	6				NaN	NaN	0	NaN	9341	3546	12884
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12903	33.835	NaN	9798.9	30	0	922.49	0.214			+	49419	VVVAVGLLGG	10	67	442.284327696462	882.554102459724	2	442.2887878417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVVAVGLLGG_	REV__ENST00000282096.8_1_11:14665308-14793517:+|nuORF	65.89745868150666	0.31220354485832413	6				NaN	NaN	0	NaN	9352	3549	12902
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12904	33.839	NaN	4371.9	30	0	257.92	0.106	+			28809	NPISGLGGTKY	11	74	553.7960612361398	1105.5775695390796	2	553.7966918945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NPISGLGGTKY_	ENSG00000115641|ENST00000530340|FHL2	117.7056744995986	0.02459125945945966	6				NaN	NaN	0	NaN	9353	3549	12902
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12905	33.841	NaN	16815	30	0	4321.8	0.106	+			266	AAMPGFIAK	9	69	453.2494000719802	904.4842472107604	2	453.2498474121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AAMPGFIAK_	ENSG00000122008|ENST00000241436|POLK;ENST00000506928.5_1_5:74842847-74879138:+|nuORF;ENST00000508867.5_1_5:74842847-74877278:+|nuORF;nc|ENSG00000122008|Q9UBT6-2|POLK;nc|ENSG00000122008|Q9UBT6-3|POLK;nc|ENSG00000122008|Q9UBT6-4|POLK;nc|ENSG00000122008|Q9UBT6-5|POLK;nc|ENSG00000122008|Q9UBT6-6|POLK;nc|ENSG00000122008|Q9UBT6-7|POLK;nc|ENSG00000122008|Q9UBT6-8|POLK;POLK|p.K571Nfs*18|1|0.29|ENSG00000122008|chr5:75596401-75596401|A/-|frameshift_variant	63.30626980617807	0.18605348971131092	6				NaN	NaN	0	NaN	9354	3549	12902
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12906	33.843	NaN	11933	30	0	1150.2	0.106			+	5959	AVLLAWEY	8	75	482.7601583827573	963.5057638323146	2	482.76025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVLLAWEY_	REV__ENSG00000125089|ENST00000245105|SH3TC1;REV__ENST00000502669.5_1_4:8220037-8239209:+|nuORF;REV__ENST00000506360.5_1_4:8220037-8234255:+|nuORF;REV__ENST00000515682.5_1_4:8207046-8242679:+|nuORF	71.37791200682192	0.3954169775488141	6				NaN	NaN	0	NaN	9355	3549	12902
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12907	33.844	NaN	9513.7	30	0	1342.4	0.106			+	48834	VVATMRESK	9	75	510.7807306621262	1019.5469083910524	2	510.78167724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVATMRESK_	REV__ENSG00000175449|ENST00000380005|RFESD;REV__nc|ENSG00000175449|Q8TAC1|RFESD	45.02220120713402	0.3613509778819777	6				NaN	NaN	0	NaN	9356	3549	12902
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12908	33.846	NaN	2146.8	30	0	704.91	0.037			+	19944	KEFNFPETM	9	62	579.7607633876469	1157.5069738420937	2	579.7611694335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_KEFNFPETM(Oxidation (M))_	REV__ENSG00000095627|ENST00000695399|TDRD1;REV__nc|ENSG00000095627|Q9BXT4-2|TDRD1;REV__nc|ENSG00000095627|Q9BXT4-3|TDRD1;REV__TDRD1|p.L142Tfs*13|1|0.26|ENSG00000095627|chr10:114199204-114199205|-/A|frameshift_variant	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	9357	3549	12902
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12909	33.847	NaN	2662.9	30	0	200.28	0.14	+			43269	TFDNVLPGK	9	61	495.7682701811278	NaN	0	495.7686462402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TFDNVLPGK_	ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;nc|ENSG00000185164|Q5JPE7-3|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2;NOMO1|p.P1102Hfs*42|1|0.36|ENSG00000103512|chr16:14886838-14886838|C/-|frameshift_variant	71.87747018426188	0.0992163553043454	6				NaN	NaN	0	NaN	9358	3549	12902
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12927	33.885	NaN	50557	30	0	20864	0.214	+			45438	TVYEEMMAK	9	82	551.2511041235996	1100.487655313999	2	551.2515869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVYEEMMAK_	ENSG00000144659|ENST00000650617|SLC25A38;SLC25A38|p.G301V|1|0.09|ENSG00000144659|chr3:39396507-39396507|G/T|missense_variant	145.15565482312357	0.00806134135205793	6				NaN	NaN	0	NaN	9373	3552	12926
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12928	33.889	NaN	33382	30	0	6437.9	0.106	+			20822	KIFSGVFVK	9	82	512.8133608404959	1023.6121687477918	2	512.813232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KIFSGVFVK_	ENSG00000146223|ENST00000493763|RPL7L1;ENST00000397415.7_1_6:42848808-42854199:+|nuORF;ENST00000462348.1_1_6:42848614-42854030:+|nuORF;ENST00000530523.1_1_8:42580956-42581139:-|nuORF;nc|ENSG00000146223|Q6DKI1-2|RPL7L1;RPL7L1|p.Q126Pfs*38|1|0.24|ENSG00000146223|chr6:42884698-42884699|-/C|frameshift_variant	134.7655990226056	0.012935733000282069	6				NaN	NaN	0	NaN	9374	3552	12926
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12929	33.891	NaN	22446	30	0	3116.7	0.106			+	5960	AVLLAWEY	8	83	482.7601583827573	963.5057638323146	2	482.75982666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVLLAWEY_	REV__ENSG00000125089|ENST00000245105|SH3TC1;REV__ENST00000502669.5_1_4:8220037-8239209:+|nuORF;REV__ENST00000506360.5_1_4:8220037-8234255:+|nuORF;REV__ENST00000515682.5_1_4:8207046-8242679:+|nuORF	62.97842346883844	0.4722955155785405	6				NaN	NaN	0	NaN	9375	3552	12926
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12930	33.893	NaN	5094.3	30	0	790.86	0.106			+	-1	LESMLKAL	8	65	460.7593650134857	NaN	0	460.75909423828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_LESM(Oxidation (M))LKAL_	REV__ENSG00000144354|ENST00000306721|CDCA7;REV__ENST00000435616.5_1_2:174224078-174228757:+|nuORF;REV__ENST00000496441.5_1_2:174219691-174228743:+|nuORF;REV__nc|ENSG00000144354|Q9BWT1-3|CDCA7;REV__nc|ENSG00000144354|Q9BWT1-4|CDCA7;REV__nc|ENSG00000144354|Q9BWT1-5|CDCA7;REV__nc|ENSG00000144354|Q9BWT1-6|CDCA7;REV__nc|ENSG00000144354|Q9BWT1|CDCA7	60.97194046774394	1.7418937515398478	6				NaN	NaN	0	NaN	9376	3552	12926
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12931	33.895	NaN	4998.3	30	0	461.75	0.106	+			44277	TSALPIIQK	9	64	485.8003684265536	969.5861839199072	2	485.7991027832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TSALPIIQK_	ENSG00000147872|ENST00000276914|PLIN2;ENST00000472715.1_1_9:19126103-19127487:-|nuORF;ENST00000475923.1_1_9:19126103-19126313:-|nuORF;PLIN2|p.V348*|1|0.15|ENSG00000147872|chr9:19116520-19116520|C/-|frameshift_variant	66.42927471994793	0.16001998865088202	6				NaN	NaN	0	NaN	9377	3552	12926
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12932	33.897	NaN	5189.3	30	0	2108.9	0.106	+			37624	SLQDYIAVKEK	11	49	431.90662597235365	1292.698048517261	3	432.2410583496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLQDYIAVKEK_	ENSG00000083845|ENST00000196551|RPS5;ENST00000598807.1_1_19:58899504-58905010:+|nuORF	50.48352884301831	0.4144963662491505	6				NaN	NaN	0	NaN	9378	3552	12926
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12933	33.898	NaN	2673.8	30	0	314.17	0.039				-1	LLRNGMEWR	9	47	411.5430684320713	NaN	0	411.54351806640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))LLRNGM(Oxidation (M))EWR_	ENST00000272647.9_1_2:128621770-128621926:-|nuORF	26.063383197487333	0.34597851983111116	6				NaN	NaN	0	NaN	9379	3552	12926
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12951	33.934	NaN	22465	30	0	6571.8	0.214	+			48674	VTSTFIIEK	9	79	519.2979554235673	1036.5813579139344	2	519.2979125976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTSTFIIEK_	ENSG00000126561|ENST00000590949|STAT5A;ENSG00000173757|ENST00000293328|STAT5B;ENST00000468312.1_1_17:40370167-40384145:-|nuORF;nc|ENSG00000126561|P42229-2|STAT5A;STAT5B|p.H584Tfs*8|3|0.33|ENSG00000173757|chr17:42210428-42210429|-/T|frameshift_variant;STAT5B|p.K583Nfs*16|2|0.34|ENSG00000173757|chr17:42210429-42210429|T/-|frameshift_variant	132.757866228626	0.013877640931359021	6				NaN	NaN	0	NaN	9394	3555	12950
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12952	33.937	NaN	12816	30	0	1270.4	0.106	+			17759	IERSKIVSI	9	75	522.8244962604418	1043.6344395876836	2	522.82421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IERSKIVSI_	PPEF2|p.T315I|1|0.52|ENSG00000156194|chr4:75876663-75876663|G/A|missense_variant	54.722347961057174	0.257609425301511	6				NaN	NaN	0	NaN	9395	3555	12950
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12953	33.939	NaN	5449.5	30	0	764.87	0.106	+			11925	FVEKWYPVV	9	76	583.8157759862654	1165.6169990393307	2	583.81591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FVEKWYPVV_	DAB2IP|p.F712Lfs*81|1|0.42|ENSG00000136848|chr9:121772659-121772659|T/-|frameshift_variant;DAB2IP|p.N938Tfs*3|1|0.56|ENSG00000136848|chr9:121773334-121773334|C/-|frameshift_variant;ENSG00000136848|ENST00000408936|DAB2IP;nc|ENSG00000136848|Q5VWQ8-2|DAB2IP;nc|ENSG00000136848|Q5VWQ8-3|DAB2IP;nc|ENSG00000136848|Q5VWQ8-4|DAB2IP;nc|ENSG00000136848|Q5VWQ8-5|DAB2IP	60.97194046774394	0.20551255781574032	6				NaN	NaN	0	NaN	9396	3555	12950
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12954	33.941	NaN	8032.1	30	0	1295.2	0.106	+			8945	EEYPDRIM	8	64	526.7394521497865	1051.464351366373	2	526.739990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EEYPDRIM_	ENSG00000101162|ENST00000217133|TUBB1;ENSG00000137267|ENST00000333628|TUBB2A;ENSG00000137285|ENST00000259818|TUBB2B;ENSG00000188229|ENST00000340384|TUBB4B;ENSG00000196230|ENST00000327892|TUBB;ENSG00000258947|ENST00000315491|TUBB3;ENST00000404155.1_1_6:3177457-3179994:-|nuORF;ENST00000518096.1_1_8:30209523-30210210:+|nuORF;ENST00000604929.1_1_9:140136931-140138005:+|nuORF;nc|ENSG00000258947|Q13509-2|TUBB3;TUBB2B|p.D177Hfs*21|1|0.32|ENSG00000137285|chr6:3225559-3225560|TC/-|frameshift_variant	65.80317337860623	0.44433089765398776	6				NaN	NaN	0	NaN	9397	3555	12950
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12955	33.943	NaN	6578.5	30	0	924.74	0.106	+			27692	MPVGMTHGL	9	72	471.73024176084704	941.4459305884941	2	471.7298889160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MPVGMTHGL_	ENSG00000092203|ENST00000448790|TOX4;nc|ENSG00000092203|O94842-2|TOX4;TOX4|p.G159Vfs*126|1|0.32|ENSG00000092203|chr14:21488743-21488743|G/-|frameshift_variant;TOX4|p.Q486Hfs*16|1|0.55|ENSG00000092203|chr14:21493073-21493073|A/-|frameshift_variant;TOX4|p.T456Dfs*60|1|0.38|ENSG00000092203|chr14:21492975-21492976|-/C|frameshift_variant	63.30626980617807	0.18605348971131092	6				NaN	NaN	0	NaN	9398	3555	12950
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12956	33.945	NaN	4563.4	30	0	2143.1	0.106			+	9956	ERDRFFLL	8	65	548.3009419428288	1094.5873309524575	2	548.30126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ERDRFFLL_	REV__ENST00000494296.1_1_21:30445560-30445752:-|nuORF	44.53106598305862	0.628196326904373	6				NaN	NaN	0	NaN	9399	3555	12950
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12957	33.946	NaN	7630.6	30	0	2161.3	0.036	+			5819	AVIGADSVTLK	11	62	537.3139339531072	1072.6133149730142	2	537.3140869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AVIGADSVTLK_	ENSG00000108651|ENST00000261708|UTP6;ENST00000477860.1_1_17:30200326-30200766:-|nuORF	96.75553188499661	0.07111942461817355	6				NaN	NaN	0	NaN	9400	3555	12950
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12976	33.982	NaN	19437	30	0	2196.7	0.214	+			44108	TPVGLIVSH	9	85	461.7714723069199	921.5283916806399	2	461.7714538574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TPVGLIVSH_	ENSG00000136718|ENST00000259239|IMP4;ENST00000460766.5_1_2:131100637-131104038:+|nuORF	148.04295825190792	0.0073252839830139265	6				NaN	NaN	0	NaN	9416	3558	12975
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12977	33.986	NaN	9173	30	0	1976.9	0.106	+			7712	DLREERVSF	9	54	384.20017371557026	1149.5786917469109	3	384.2000732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DLREERVSF_	ENSG00000176715|ENST00000614302|ACSF3	56.43379154798735	0.2433427591689151	6				NaN	NaN	0	NaN	9417	3558	12975
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12978	33.988	NaN	5239.1	30	0	529.23	0.106	+			31171	QGLEERTR	8	66	494.7608773173778	987.5072017015556	2	494.7606506347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QGLEERTR_	ENST00000340342.10_1_9:90341067-90342512:+|nuORF;ENST00000343150.9_1_9:90341067-90342580:+|nuORF;ENST00000375894.9_1_9:90341067-90342991:+|nuORF;ENST00000482054.1_1_9:90341067-90342580:+|nuORF	77.31757898189308	0.345924878368729	6				NaN	NaN	0	NaN	9418	3558	12975
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12979	33.99	NaN	3580.7	30	0	1210.6	0.106	+			7713	DLREERVSF	9	62	575.7965868978566	1149.5786208625132	2	575.7973022460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DLREERVSF_	ENSG00000176715|ENST00000614302|ACSF3	41.42661286455405	0.403525789677298	6				NaN	NaN	0	NaN	9419	3558	12975
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12980	33.992	NaN	1165.6	30	0	414.59	0.106			+	-1	ATLLKLFTM	9	27	351.8731994628906	NaN	0	351.8731994628906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_ATLLKLFTM(Oxidation (M))_	REV__COL11A1|p.N1709Ifs*76|1|0.32|ENSG00000060718|chr1:102879831-102879831|T/-|frameshift_variant;REV__COL11A1|p.V1694A|1|0.11|ENSG00000060718|chr1:102879876-102879876|A/G|missense_variant;REV__ENSG00000060718|ENST00000370096|COL11A1;REV__nc|ENSG00000060718|P12107-2|COL11A1;REV__nc|ENSG00000060718|P12107-3|COL11A1;REV__nc|ENSG00000060718|P12107-4|COL11A1	20.94693142431847	0.3660861156085067	6				NaN	NaN	0	NaN	9420	3558	12975
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12981	33.994	NaN	2627.1	30	0	251.5	0.106			+	21398	KMMSSSPPPR	10	62	559.2797379505025	1116.544922967805	2	559.2809448242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KMMSSSPPPR_	REV__ENST00000453491.2_1_10:118594744-118609115:-|nuORF	56.43379154798735	0.3982744522255666	6				NaN	NaN	0	NaN	9421	3558	12975
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12982	33.995	NaN	2585	30	0	381.28	0.035	+			46972	VKKLTPANI	9	60	492.31605421222986	982.6175554912597	2	492.3161926269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VKKLTPANI_	ENST00000573177.1_1_18:3604087-3604141:+|nuORF	14.864876125193954	0.6112419832031293	6				NaN	NaN	0	NaN	9422	3558	12975
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13000	34.03	NaN	15435	30	0	2312.6	0.214	+			35480	SATETCYTY	9	76	519.7079935443603	1037.4014341555205	2	519.7081298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SATETCYTY_	ENSG00000132465|ENST00000254801|JCHAIN	116.90359126533652	0.02307425081617795	6				NaN	NaN	0	NaN	9437	3561	12999
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13001	34.034	NaN	23183	30	0	3436.6	0.106	+			23479	LAEVGRVL	8	72	428.7661593145715	855.517765695943	2	428.7659912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LAEVGRVL_	ENSG00000010165|ENST00000361735|METTL13;METTL13|p.L636Pfs*8|1|0.12|ENSG00000010165|chr1:171796557-171796558|-/C|frameshift_variant;nc|ENSG00000010165|Q8N6R0-1|METTL13;nc|ENSG00000010165|Q8N6R0-2|METTL13;nc|ENSG00000010165|Q8N6R0-3|METTL13;nc|ENSG00000010165|Q8N6R0-4|METTL13	96.19043198914106	0.25873003980794995	6				NaN	NaN	0	NaN	9438	3561	12999
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13002	34.036	NaN	7339.1	30	0	876.71	0.106	+			38003	SPLGGERPF	9	72	480.25125366339114	958.4879543935823	2	480.25067138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SPLGGERPF_	ENSG00000064042|ENST00000503057|LIMCH1;LIMCH1|p.E420Sfs*61|1|0.09|ENSG00000064042|chr4:41646277-41646277|A/-|frameshift_variant;LIMCH1|p.K805Rfs*20|1|0.37|ENSG00000064042|chr4:41680049-41680049|A/-|frameshift_variant;LIMCH1|p.T960Pfs*48|1|0.18|ENSG00000064042|chr4:41685768-41685768|A/-|frameshift_variant;nc|ENSG00000064042|Q9UPQ0-10|LIMCH1;nc|ENSG00000064042|Q9UPQ0-2|LIMCH1;nc|ENSG00000064042|Q9UPQ0-3|LIMCH1;nc|ENSG00000064042|Q9UPQ0-4|LIMCH1;nc|ENSG00000064042|Q9UPQ0-5|LIMCH1;nc|ENSG00000064042|Q9UPQ0-6|LIMCH1;nc|ENSG00000064042|Q9UPQ0-8|LIMCH1;nc|ENSG00000064042|Q9UPQ0-9|LIMCH1;nc|ENSG00000064042|Q9UPQ0|LIMCH1	75.04331003522576	0.118981335847003	6				NaN	NaN	0	NaN	9439	3561	12999
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13003	34.038	NaN	5786.8	30	0	734.55	0.106	+			51391	YTNGKCVIL	9	65	505.77051478626555	1009.5264766393311	2	505.7705383300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YTNGKCVIL_	ENSG00000071127|ENST00000499869|WDR1;ENST00000509600.1_1_4:10117520-10118290:-|nuORF;ENST00000514319.5_1_4:10110004-10118075:-|nuORF;nc|ENSG00000071127|O75083-3|WDR1	58.78195531508484	0.22376836668196862	6				NaN	NaN	0	NaN	9440	3561	12999
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13004	34.04	NaN	6663.1	30	0	1324.3	0.106				-1	NEAGMVHNL	9	65	500.72994657594035	999.4453402186807	2	500.7296447753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_NEAGM(Oxidation (M))VHNL_	ENSG00000169994|ENST00000409816|MYO7B;nc|ENSG00000169994|Q6PIF6-2|MYO7B;nc|ENSG00000169994|Q6PIF6|MYO7B	34.172542307311794	0.4838870758800184	6				NaN	NaN	0	NaN	9441	3561	12999
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13005	34.041	NaN	7633	30	0	989.34	0.106	+			31802	QPMEVQEGY	9	67	540.736935486876	1079.4593180405518	2	540.7369384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QPMEVQEGY_	ENSG00000130726|ENST00000253024|TRIM28;ENST00000601150.5_1_19:59059168-59060232:+|nuORF;nc|ENSG00000130726|Q13263-2|TRIM28	90.36981228632155	0.0638227155548745	6				NaN	NaN	0	NaN	9442	3561	12999
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13006	34.043	NaN	2628.1	30	0	136.59	0.035	+			37680	SLSADKFQV	9	68	497.7651876912395	993.515822449279	2	497.76458740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SLSADKFQV_	ENSG00000140365|ENST00000267935|COMMD4;ENST00000565834.1_1_15:75631960-75632343:+|nuORF;ENST00000566843.1_1_15:75631960-75632245:+|nuORF	44.377184641726394	0.36891676396732553	6				NaN	NaN	0	NaN	9443	3561	12999
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13024	34.079	NaN	5444.3	30	0	980.43	0.214			+	26658	LVEVDVNLV	9	71	500.28967277524333	998.5647926172867	2	500.2894592285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LVEVDVNLV_	REV__ENST00000457976.1_1_9:93881489-93881789:-|nuORF	47.657333605630114	0.33044192980041115	6				NaN	NaN	0	NaN	9458	3564	13023
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13025	34.082	NaN	2405.7	30	0	191.39	0.106			+	51002	YIVHCVFY	8	67	522.2562622329697	1042.4979715327393	2	522.2564086914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YIVHCVFY_	REV__ENST00000343217.6_1_2:241503143-241503332:+|nuORF	43.626045697637714	0.6338121648150432	6				NaN	NaN	0	NaN	9459	3564	13023
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13026	34.084	NaN	2054.3	30	0	219.61	0.106				-1	SVICTFPLM	9	62	534.2664645143485	1066.518376095497	2	534.2666625976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SVIC(Carbamidomethyl (C))TFPLM_	tr|U7SNG9|U7SNG9_FUSNUS-adenosylmethionineuptaketransporterOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01752PE=4SV=1	30.503639358989545	0.5181749237905803	6				NaN	NaN	0	NaN	9460	3564	13023
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13027	34.086	NaN	2065.3	30	0	214.95	0.106	+			23796	LCLWGIAL	8	65	444.75544400404146	887.496335074883	2	444.75543212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LCLWGIAL_	ENSG00000121900|ENST00000373463|TMEM54;ENST00000482771.1_1_1:33360408-33361058:-|nuORF;nc|ENSG00000121900|Q969K7-2|TMEM54;nc|ENSG00000121900|Q969K7-3|TMEM54	67.3271909547111	0.42924334279516513	6				NaN	NaN	0	NaN	9461	3564	13023
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13028	34.088	NaN	6640.1	30	0	994	0.106	+			50632	YEAVREVL	8	60	489.7666722212626	977.5187915093252	2	489.76580810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YEAVREVL_	ENSG00000198755|ENST00000322203|RPL10A;ENST00000464112.5_1_6:35436546-35438524:+|nuORF;ENST00000467020.5_1_6:35436211-35436817:+|nuORF;ENST00000472730.1_1_3:61728131-61728755:-|nuORF;ENST00000490335.4_1_6:35436211-35436651:+|nuORF;RPL10A|p.P135Lfs*17|1|0.35|ENSG00000198755|chr6:35470270-35470270|C/-|frameshift_variant	65.46538089061403	0.44767499471257033	6				NaN	NaN	0	NaN	9462	3564	13023
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13029	34.09	NaN	2266.6	30	0	585.89	0.033			+	30342	PTTPGHVGI	9	47	439.7400304623364	877.4655079914728	2	439.73974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PTTPGHVGI_	REV__ENSG00000136068|ENST00000295956|FLNB;REV__ENST00000481470.5_1_3:58155276-58156486:+|nuORF;REV__ENST00000484981.1_1_3:58151207-58156486:+|nuORF;REV__nc|ENSG00000136068|O75369-2|FLNB;REV__nc|ENSG00000136068|O75369-3|FLNB;REV__nc|ENSG00000136068|O75369-6|FLNB;REV__nc|ENSG00000136068|O75369-7|FLNB;REV__nc|ENSG00000136068|O75369-8|FLNB;REV__nc|ENSG00000136068|O75369-9|FLNB	31.954861631926434	0.5046124803899898	6				NaN	NaN	0	NaN	9463	3564	13023
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13030	34.09	NaN	5220.7	30	0	808.09	0.14			+	30081	PQNQELTY	8	63	496.7379701911577	991.4613874491154	2	496.73760986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PQNQELTY_	REV__ENST00000261609.11_1_15:28538126-28544646:-|nuORF	65.80317337860623	0.44433089765398776	6				NaN	NaN	0	NaN	9464	3564	13023
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13048	34.128	NaN	2667	30	0	208.1	0.214				-1	 	0	54	453.2494000719802	904.4842472107604	2	453.7539367675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9479	3567	13047
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13049	34.131	NaN	1456.8	30	0	215	0.106			+	24353	LFLTTTECK	9	60	528.275634765625	NaN	0	528.275634765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LFLTTTECK_	REV__ENST00000381584.5_2_10:225952-243884:+|nuORF	38.80614096846853	0.28164298475537564	6				NaN	NaN	0	NaN	9480	3567	13047
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13050	34.133	NaN	3064.4	30	0	339.59	0.106			+	37844	SNKNQVNLM	9	61	524.2670664252148	1046.5195799172295	2	524.2678833007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SNKNQVNLM_	REV__ENSG00000137267|ENST00000333628|TUBB2A;REV__ENSG00000137285|ENST00000259818|TUBB2B;REV__ENSG00000188229|ENST00000340384|TUBB4B;REV__ENSG00000196230|ENST00000327892|TUBB;REV__ENST00000406999.2_1_6:153220048-153220141:+|nuORF;REV__ENST00000454403.1_1_13:41958968-41959286:-|nuORF;REV__ENST00000604929.1_1_9:140136931-140138005:+|nuORF;REV__TUBB|p.S339G|1|0.27|ENSG00000196230|chr6:30724077-30724077|A/G|missense_variant	33.51558372728122	0.4900267029546261	6				NaN	NaN	0	NaN	9481	3567	13047
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13051	34.135	NaN	2831	30	0	420.6	0.106			+	35746	SDTFGAPPPV	10	53	494.2429428603225	986.471332787445	2	494.242431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SDTFGAPPPV_	REV__ENSG00000141933|ENST00000359315|TPGS1;REV__ENST00000588278.1_1_19:507506-508034:+|nuORF;REV__nc|ENSG00000141933|Q6ZTW0-2|TPGS1	40.05817265558897	0.5486090488315611	6				NaN	NaN	0	NaN	9482	3567	13047
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13052	34.137	NaN	1972.6	30	0	649.7	0.106				-1	MMEKTRMY	8	61	561.2405846864496	1120.466616439699	2	561.2415161132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Oxidation (M)	_M(Oxidation (M))M(Oxidation (M))EKTRMY_	ENSG00000118965|ENST00000281405|WDR35;ENST00000445063.5_1_2:20113365-20153734:-|nuORF;nc|ENSG00000118965|Q9P2L0|WDR35;WDR35|p.R782*|1|0.2|ENSG00000118965|chr2:19936322-19936323|-/A|frameshift_variant	31.954861631926434	0.7126016770032289	6				NaN	NaN	0	NaN	9483	3567	13047
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13053	34.139	NaN	1749.4	30	0	336.46	0.106			+	30331	PTSCFESSY	9	60	510.7030132641968	1019.3914735951936	2	510.7027587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PTSCFESSY_	REV__ENSG00000104368|ENST00000220809|PLAT;REV__nc|ENSG00000104368|P00750-2|PLAT;REV__nc|ENSG00000104368|P00750-3|PLAT;REV__PLAT|p.V248Gfs*18|1|0.26|ENSG00000104368|chr8:42182781-42182782|-/T|frameshift_variant;REV__PLAT|p.Y304*|1|0.15|ENSG00000104368|chr8:42180663-42180663|G/-|frameshift_variant	40.5726180659479	0.4135428067754104	6				NaN	NaN	0	NaN	9484	3567	13047
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13054	34.141	NaN	1628.6	30	0	220.1	0.033	+			18504	ISIGGKLPV	9	51	442.2842102050781	NaN	0	442.2842102050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ISIGGKLPV_	ENSG00000198691|ENST00000370225|ABCA4	42.396135135203025	0.2590952873412954	6				NaN	NaN	0	NaN	9485	3567	13047
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13072	34.174	NaN	4378.7	30	0	656.99	0.214	+			50499	YAMKAEVL	8	59	462.746534615572	923.478516297944	2	462.7464599609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YAMKAEVL_	ENSG00000183576|ENST00000331768|SETD3	74.25504064058377	0.37144338840759816	6				NaN	NaN	0	NaN	9500	3570	13071
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13073	34.177	NaN	6092.9	30	0	1529.2	0.106	+			17122	HSMDMKFTY	9	68	580.2489739623223	1158.4833949914446	2	580.2496948242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HSMDMKFTY_	ENSG00000116016|ENST00000263734|EPAS1	168.25843898104137	0.0030641937004078144	6				NaN	NaN	0	NaN	9501	3570	13071
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13074	34.179	NaN	4187.3	30	0	684.31	0.106				-1	VSMEELIAK	9	65	518.271585878775	NaN	0	518.2716064453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_VSM(Oxidation (M))EELIAK_	tr|U7SHC2|U7SHC2_FUSNUD-lactatedehydrogenaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02257PE=3SV=1	52.936696900407355	0.1864545979552969	6				NaN	NaN	0	NaN	9502	3570	13071
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13075	34.181	NaN	4651.7	30	0	640.77	0.106	+			3050	ASFILGTGK	9	56	447.2581433939525	892.501733854705	2	447.2580261230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASFILGTGK_	CDCA2|p.N847Mfs*14|1|0.15|ENSG00000184661|chr8:25507200-25507200|A/-|frameshift_variant;ENSG00000184661|ENST00000330560|CDCA2;nc|ENSG00000184661|Q69YH5-2|CDCA2	117.81106730687013	0.02252488733980868	6				NaN	NaN	0	NaN	9503	3570	13071
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13076	34.183	NaN	5428.6	30	0	940.18	0.106	+			45255	TVQELAIYK	9	65	532.8028965539205	1063.591240174641	2	532.8031616210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TVQELAIYK_	ENSG00000102595|ENST00000376747|UGGT2;nc|ENSG00000102595|Q9NYU1-2|UGGT2;UGGT2|p.N1268Ifs*10|1|0.3|ENSG00000102595|chr13:95859613-95859613|T/-|frameshift_variant	128.60217544463768	0.015992218256422188	6				NaN	NaN	0	NaN	9504	3570	13071
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13077	34.185	NaN	2589.2	30	0	479.01	0.106	+			18301	IPQLPAPPK	9	59	480.7976000875212	959.5806472418424	2	480.7971496582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IPQLPAPPK_	ENSG00000174917|ENST00000309324|MICOS13;ENST00000585605.1_1_19:5678827-5679734:-|nuORF	47.657333605630114	0.33044192980041115	6				NaN	NaN	0	NaN	9505	3570	13071
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13078	34.187	NaN	2324.1	30	0	459.59	0.035	+			8477	EASKLVMSY	9	63	514.2596721276424	1026.5047913220847	2	514.756103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EASKLVMSY_	ENSG00000128641|ENST00000392318|MYO1B;ENSG00000166866|ENST00000300119|MYO1A;ENST00000471904.1_1_2:192128111-192215016:+|nuORF;MYO1B|p.A603Sfs*37|1|0.42|ENSG00000128641|chr2:191390310-191390311|-/A|frameshift_variant;MYO1B|p.F948Cfs*47|1|0.41|ENSG00000128641|chr2:191411140-191411141|-/TG|frameshift_variant;MYO1B|p.S730Afs*4|2|0.4|ENSG00000128641|chr2:191393178-191393178|A/-|frameshift_variant;nc|ENSG00000128641|O43795-2|MYO1B	82.30502934623384	0.08758161712619916	6				NaN	NaN	0	NaN	9506	3570	13071
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13096	34.222	NaN	42842	30	0	28250	0.214	+			41290	SVLLFVTKK	9	65	345.55843259007133	1033.653468370414	3	345.55841064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVLLFVTKK_	ENSG00000198231|ENST00000389924|DDX42;ENST00000578593.1_1_17:61889231-61895755:+|nuORF;nc|ENSG00000198231|Q86XP3-2|DDX42	63.53385203322761	0.18415635464017938	6				NaN	NaN	0	NaN	9521	3573	13095
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13097	34.226	NaN	13391	30	0	1582.5	0.106	+			10174	ESYSVYVYK	9	72	569.2770676180593	1136.5395823029185	2	569.2771606445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ESYSVYVYK_	ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;nc|ENSG00000203814|Q5QNW6-2|H2BC18	117.81106730687013	0.02252488733980868	6				NaN	NaN	0	NaN	9522	3573	13095
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13098	34.228	NaN	3508.7	30	0	409.58	0.106	+			30673	QAYSGIQQY	9	60	529.2508929772093	1056.4872330212186	2	529.2510986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QAYSGIQQY_	CELF2|p.A423Gfs*31|1|0.4|ENSG00000048740|chr10:11325842-11325843|-/G|frameshift_variant;ENSG00000048740|ENST00000633077|CELF2;ENSG00000149187|ENST00000687097|CELF1;nc|ENSG00000048740|O95319-2|CELF2;nc|ENSG00000048740|O95319-3|CELF2;nc|ENSG00000048740|O95319-4|CELF2;nc|ENSG00000048740|O95319-5|CELF2;nc|ENSG00000048740|O95319|CELF2;nc|ENSG00000149187|Q92879-2|CELF1;nc|ENSG00000149187|Q92879-3|CELF1;nc|ENSG00000149187|Q92879-4|CELF1;nc|ENSG00000149187|Q92879-5|CELF1;nc|ENSG00000149187|Q92879-6|CELF1;nc|ENSG00000149187|Q92879|CELF1	69.6276240434122	0.14239879520340665	6				NaN	NaN	0	NaN	9523	3573	13095
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13099	34.229	NaN	5292.4	30	0	712.52	0.106	+			46843	VIFKDFVNK	9	67	555.3213075601915	1108.6280621871829	2	555.32177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VIFKDFVNK_	ENSG00000173821|ENST00000582970|RNF213;ENST00000559070.5_1_17:78261823-78310301:+|nuORF;nc|ENSG00000173821|Q63HN8-4|RNF213;nc|ENSG00000173821|Q63HN8|RNF213;RNF213|p.C5022Lfs*7|1|0.3|ENSG00000173821|chr17:80389237-80389237|G/-|frameshift_variant;RNF213|p.P2167Lfs*64|1|0.09|ENSG00000173821|chr17:80344834-80344835|-/T|frameshift_variant;RNF213|p.Q1953Rfs*50|2|0.13|ENSG00000173821|chr17:80340219-80340219|C/-|frameshift_variant	120.8684288430529	0.02067403653475984	6				NaN	NaN	0	NaN	9524	3573	13095
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13100	34.231	NaN	6834.7	30	0	971.8	0.106	+			8478	EASKLVMSY	9	61	514.2596721276424	1026.5047913220847	2	514.26025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EASKLVMSY_	ENSG00000128641|ENST00000392318|MYO1B;ENSG00000166866|ENST00000300119|MYO1A;ENST00000471904.1_1_2:192128111-192215016:+|nuORF;MYO1B|p.A603Sfs*37|1|0.42|ENSG00000128641|chr2:191390310-191390311|-/A|frameshift_variant;MYO1B|p.F948Cfs*47|1|0.41|ENSG00000128641|chr2:191411140-191411141|-/TG|frameshift_variant;MYO1B|p.S730Afs*4|2|0.4|ENSG00000128641|chr2:191393178-191393178|A/-|frameshift_variant;nc|ENSG00000128641|O43795-2|MYO1B	125.81401957644128	0.01768009863045738	6				NaN	NaN	0	NaN	9525	3573	13095
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13101	34.233	NaN	14277	30	0	6757.5	0.106	+			31567	QLPDKWQHDL	10	57	427.21922460731895	1278.6358444221569	3	427.21917724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QLPDKWQHDL_	ENSG00000183684|ENST00000505490|ALYREF;ENST00000511412.1_1_17:79847713-79848864:-|nuORF;nc|ENSG00000183684|Q86V81|ALYREF	42.86426827375447	0.522752283233888	6				NaN	NaN	0	NaN	9526	3573	13095
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13102	34.235	NaN	8109.1	30	0	2333	0.033			+	18112	ILAIPPPK	8	59	424.78380007246034	847.5530472117207	2	424.78375244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ILAIPPPK_	REV__nc|ENSG00000290292|Q8IX15-3|HOMEZ;REV__nc|ENSG00000290292|Q8IX15|HOMEZ	57.452649787351945	0.526999880452039	6				NaN	NaN	0	NaN	9527	3573	13095
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13120	34.271	NaN	20758	30	0	4559.5	0.214	+			47883	VSLGTPIMK	9	76	473.2754118343405	944.536270735481	2	473.27508544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSLGTPIMK_	ECT2|p.K832Rfs*25|1|0.1|ENSG00000114346|chr3:172815693-172815693|A/-|frameshift_variant;ENSG00000114346|ENST00000392692|ECT2;nc|ENSG00000114346|Q9H8V3-2|ECT2;nc|ENSG00000114346|Q9H8V3-3|ECT2;nc|ENSG00000114346|Q9H8V3-4|ECT2	176.08678752253132	0.0017279326439731339	6				NaN	NaN	0	NaN	9542	3576	13119
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13121	34.274	NaN	2275.6	30	0	255.14	0.106			+	20891	KIQKTFLF	8	65	512.8133608404959	1023.6121687477918	2	512.8133544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KIQKTFLF_	REV__sp|F5HDQ6|DNBI_HCMVMMajorDNA-bindingproteinOS=Humancytomegalovirus(strainMerlin)OX=295027GN=DBPPE=3SV=1;REV__sp|P17147|DNBI_HCMVAMajorDNA-bindingproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=DBPPE=1SV=1	40.5726180659479	0.6527593143185008	6				NaN	NaN	0	NaN	9543	3576	13119
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13122	34.277	NaN	2541	30	0	496.71	0.106			+	10358	ETVLVQLK	8	60	465.28686665587776	928.5591803785555	2	465.286865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ETVLVQLK_	REV__ENST00000266746.10_1_12:100561203-100566904:-|nuORF	60.97194046774394	0.49215940876911696	6				NaN	NaN	0	NaN	9544	3576	13119
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13123	34.278	NaN	4883.4	30	0	796.17	0.106	+			44278	TSALPIIQK	9	59	485.8003684265536	969.5861839199072	2	485.7996826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TSALPIIQK_	ENSG00000147872|ENST00000276914|PLIN2;ENST00000472715.1_1_9:19126103-19127487:-|nuORF;ENST00000475923.1_1_9:19126103-19126313:-|nuORF;PLIN2|p.V348*|1|0.15|ENSG00000147872|chr9:19116520-19116520|C/-|frameshift_variant	76.7741389293348	0.11149722112137898	6				NaN	NaN	0	NaN	9545	3576	13119
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13124	34.28	NaN	3037.6	30	0	565.88	0.106	+			42512	TAPPVEGPF	9	54	457.73438418817386	913.4542154431477	2	457.734130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TAPPVEGPF_	ENST00000338492.8_1_10:134018945-134019089:+|nuORF	57.81127852772723	0.2318599694398087	6				NaN	NaN	0	NaN	9546	3576	13119
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13125	34.282	NaN	1504.8	30	0	210.21	0.032	+			25408	LPLAAQGK	8	49	399.2474869215863	NaN	0	399.24737548828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LPLAAQGK_	ENSG00000114062|ENST00000648336|UBE3A;ENST00000429033.1_1_21:32434669-32435362:-|nuORF;nc|ENSG00000114062|Q05086-2|UBE3A;nc|ENSG00000114062|Q05086|UBE3A	28.2542754592877	1.7418937515398478	6				NaN	NaN	0	NaN	9547	3576	13119
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13126	34.283	NaN	1145.3	30	0	56.926	0.144			+	-1	LIDLLCTEGDI	11	43	421.2155795976082	1260.6249093930246	3	421.2155456542969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_LIDLLC(Carbamidomethyl (C))TEGDI_	REV__ENSG00000133703|ENST00000311936|KRAS;REV__ENSG00000174775|ENST00000311189|HRAS;REV__ENSG00000213281|ENST00000369535|NRAS;REV__nc|ENSG00000133703|P01116|KRAS;REV__nc|ENSG00000174775|P01112-2|HRAS	31.634271133179894	0.6579734920221648	6				NaN	NaN	0	NaN	9548	3576	13119
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13144	34.32	NaN	7251.1	30	0	1279.9	0.214	+			36936	SILGTPLSK	9	65	458.2792774946405	914.544002056081	2	458.2790222167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SILGTPLSK_	ENSG00000166912|ENST00000435680|MTMR10;ENST00000566338.5_1_15:31233675-31240771:-|nuORF;ENST00000567567.5_1_15:31233675-31258111:-|nuORF;MTMR10|p.L761*|1|0.4|ENSG00000166912|chr15:30941522-30941522|A/-|frameshift_variant	54.722347961057174	0.257609425301511	6				NaN	NaN	0	NaN	9563	3579	13143
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13145	34.324	NaN	4725.8	30	0	462.27	0.106	+			42534	TAREYALK	8	66	476.26649785490713	950.5184427766143	2	476.2662353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAREYALK_	ENSG00000133083|ENST00000360631|DCLK1;nc|ENSG00000133083|O15075-2|DCLK1;nc|ENSG00000133083|O15075-3|DCLK1;nc|ENSG00000133083|O15075-4|DCLK1	44.116797842482775	0.6307669463330267	6				NaN	NaN	0	NaN	9564	3579	13143
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13146	34.326	NaN	7746.8	30	0	856.66	0.106			+	44283	TSALPLSAVL	10	73	486.2928507899933	970.5711486467866	2	486.29254150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TSALPLSAVL_	REV__ENST00000354725.7_1_7:127292278-127292377:+|nuORF	76.7741389293348	0.22197596950688292	6				NaN	NaN	0	NaN	9565	3579	13143
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13147	34.328	NaN	7382.9	30	0	661.44	0.106				-1	QPAAEMAKGY	10	65	541.253207300283	1080.4918616673658	2	541.2534790039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_QPAAEM(Oxidation (M))AKGY_	ENSG00000172073|ENST00000303254|TEX37	65.46538089061403	0.31613324008013116	6				NaN	NaN	0	NaN	9566	3579	13143
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13148	34.33	NaN	9953.7	30	0	1905.2	0.106	+			906	AEIDAHLV	8	69	434.23228396552037	866.4500149978408	2	434.2320861816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEIDAHLV_	ENSG00000100902|ENST00000261479|PSMA6;ENST00000400275.2_1_Y:15398697-15399255:+|nuORF;ENST00000554457.1_1_14:35786443-35786509:+|nuORF;nc|ENSG00000100902|P60900-2|PSMA6;nc|ENSG00000100902|P60900-3|PSMA6	55.50420428727701	0.5462892107279674	6				NaN	NaN	0	NaN	9567	3579	13143
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13149	34.331	NaN	4187	30	0	989.69	0.036	+			17029	HPVNAFKLM	9	63	528.7860244848956	1055.5574960365911	2	528.7875366210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HPVNAFKLM_	ENSG00000122884|ENST00000394890|P4HA1;nc|ENSG00000122884|P13674-2|P4HA1;nc|ENSG00000122884|P13674-3|P4HA1	45.9519527083369	0.35044536499095585	6				NaN	NaN	0	NaN	9568	3579	13143
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13150	34.332	NaN	4304.6	30	0	1225.5	0.14			+	-1	EMGLREALI	9	72	524.2806383200334	1046.5467237068667	2	524.28466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_EM(Oxidation (M))GLREALI_	REV__tr|U7SNB1|U7SNB1_FUSNURNApolymerasesigmafactorSigAOS=FusobacteriumnucleatumCTI-5OX=1316586GN=sigAPE=3SV=1	47.657333605630114	0.33044192980041115	6				NaN	NaN	0	NaN	9569	3579	13143
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13168	34.37	NaN	41262	30	0	4959.9	0.214	+			35797	SEAKGLVTL	9	93	459.26884966401053	916.5231463948211	2	459.2686462402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEAKGLVTL_	ENSG00000070669|ENST00000394308|ASNS;nc|ENSG00000070669|P08243-2|ASNS;nc|ENSG00000070669|P08243-3|ASNS;TRRAP-ASNS|1|fusion;TRRAP-ASNS|2|fusion	124.08010499294276	0.018729767491916592	6				NaN	NaN	0	NaN	9584	3582	13167
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13169	34.373	NaN	29299	30	0	5435.4	0.106	+			5765	AVGLVLPAK	9	70	434.28689434584106	866.5592357584821	2	434.28662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVGLVLPAK_	ENSG00000162496|ENST00000616661|DHRS3;nc|ENSG00000162496|O75911-2|DHRS3	97.47269410471826	0.04379738608259218	6				NaN	NaN	0	NaN	9585	3582	13167
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13170	34.375	NaN	25038	30	0	8714.7	0.106	+			38774	SSLYIILKK	9	59	355.5620817956365	1063.6644159871096	3	355.5619812011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSLYIILKK_	ENSG00000155561|ENST00000285968|NUP205	101.25262130126117	0.03792372629710479	6				NaN	NaN	0	NaN	9586	3582	13167
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13171	34.377	NaN	4678.3	30	0	315.07	0.106	+			8326	EAKIRSLF	8	67	482.28493818847664	962.5553234437533	2	482.2847595214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EAKIRSLF_	ENSG00000146350|ENST00000398212|TBC1D32;ENST00000464622.5_1_6:121513684-121545514:-|nuORF;nc|ENSG00000146350|Q96NH3-4|TBC1D32;TBC1D32|p.F1022Sfs*5|1|0.3|ENSG00000146350|chr6:121113166-121113166|A/-|frameshift_variant;TBC1D32|p.L1005Ffs*9|1|0.37|ENSG00000146350|chr6:121115215-121115216|TT/-|frameshift_variant	63.30626980617807	0.4690498839812213	6				NaN	NaN	0	NaN	9587	3582	13167
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13172	34.379	NaN	6086.8	30	0	726.76	0.106	+			43917	TPAEIREEF	9	69	546.272354405625	1090.53015587805	2	546.2725830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TPAEIREEF_	ENSG00000007923|ENST00000377577|DNAJC11;ENST00000460594.5_1_1:6714320-6761860:-|nuORF;ENST00000485073.5_1_1:6713895-6761860:-|nuORF;nc|ENSG00000007923|Q9NVH1-2|DNAJC11;nc|ENSG00000007923|Q9NVH1-3|DNAJC11	93.5975768576971	0.05472259948179787	6				NaN	NaN	0	NaN	9588	3582	13167
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13173	34.381	NaN	9100.8	30	0	985.68	0.04	+			33020	REIAQDFKTDL	11	71	445.90168681680944	1334.6832310506284	3	445.9013977050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_REIAQDFKTDL_	ENSG00000132475|ENST00000254810|H3-3B;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000168148|ENST00000366696|H3-4;ENSG00000183598|ENST00000331491|H3C13;ENSG00000197153|ENST00000359303|H3C12;ENSG00000197409|ENST00000356476|H3C4;ENSG00000203811|ENST00000369158|H3C14;ENSG00000203852|ENST00000403683|H3C15;ENSG00000273983|ENST00000614378|H3C8;ENSG00000274750|ENST00000614911|H3C6;ENSG00000275379|ENST00000616365|H3C11;ENSG00000275714|ENST00000613854|H3C1;ENSG00000277775|ENST00000618052|H3C7;ENSG00000278828|ENST00000685041|H3C10;ENST00000401004.2_1:120904811-120905087:+|nuORF;ENST00000586518.1_1_17:73774674-73775034:-|nuORF;ENST00000593254.1_1_17:73774678-73775846:-|nuORF	36.527901853580055	0.6054519527965578	6				NaN	NaN	0	NaN	9589	3582	13167
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13174	34.381	NaN	3815.8	30	0	549.13	0.138			+	24890	LKLAEKSP	8	68	443.2740612920313	884.5335696508627	2	443.2739562988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LKLAEKSP_	REV__ENSG00000124201|ENST00000396105|ZNFX1;REV__nc|ENSG00000124201|Q9P2E3-2|ZNFX1;REV__ZNFX1|p.R900Efs*2|2|0.38|ENSG00000124201|chr20:49255914-49255914|T/-|frameshift_variant	79.71258880314673	0.32596852995588826	6				NaN	NaN	0	NaN	9590	3582	13167
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13192	34.419	NaN	29048	30	0	4330.5	0.214	+			41144	SVIVQPFSK	9	76	502.79261075737907	1003.5706685815582	2	502.79229736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVIVQPFSK_	ENSG00000137871|ENST00000267807|ZNF280D;nc|ENSG00000285253|Q6N043-2|ZNF280D;nc|ENSG00000285253|Q6N043-3|ZNF280D;nc|ENSG00000285253|Q6N043-6|ZNF280D	79.48907831485694	0.09975780661107167	6				NaN	NaN	0	NaN	9605	3585	13191
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13193	34.423	NaN	28098	30	0	16852	0.106	+			47135	VLPPQTIIQ	9	66	350.87801276961284	1049.6122089090386	3	350.8779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))VLPPQTIIQ_	ENSG00000185728|ENST00000539294|YTHDF3;YTHDF3|p.P304S|1|0.21|ENSG00000185728|chr8:63186921-63186921|C/T|missense_variant	51.52775601994872	0.28504342437107444	6				NaN	NaN	0	NaN	9606	3585	13191
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13194	34.425	NaN	8157.8	30	0	3115.9	0.106	+			14831	GTLKDLIYK	9	70	525.813726842395	1049.61290075159	2	525.8138427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTLKDLIYK_	ENSG00000168297|ENST00000356151|PXK;nc|ENSG00000168297|Q7Z7A4-2|PXK;nc|ENSG00000168297|Q7Z7A4-3|PXK;nc|ENSG00000168297|Q7Z7A4-4|PXK;nc|ENSG00000168297|Q7Z7A4-5|PXK;nc|ENSG00000168297|Q7Z7A4-6|PXK;nc|ENSG00000168297|Q7Z7A4-7|PXK	75.65223720490533	0.11634833104049533	6				NaN	NaN	0	NaN	9607	3585	13191
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13195	34.427	NaN	3062.5	30	0	545.43	0.106	+			28749	NPADSISHVAY	11	64	587.2809167858309	1172.5472806384616	2	587.2804565429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NPADSISHVAY_	ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;TRRAP-ASNS|1|fusion;TRRAP-ASNS|2|fusion;TRRAP|p.A1620Cfs*35|1|0.27|ENSG00000196367|chr7:98949499-98949500|-/G|frameshift_variant;TRRAP|p.K3443Sfs*19|1|0.28|ENSG00000196367|chr7:99004246-99004246|A/-|frameshift_variant;TRRAP|p.P1292Lfs*17|1|0.44|ENSG00000196367|chr7:98933258-98933258|C/-|frameshift_variant;TRRAP|p.P1360Afs*14|1|0.05|ENSG00000196367|chr7:98935641-98935642|-/GCAAATAA|frameshift_variant	81.52500206392136	0.13965942453989383	6				NaN	NaN	0	NaN	9608	3585	13191
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13196	34.428	NaN	2518.8	30	0	352.33	0.106				-1	GCAAVVAALLL	11	66	529.3075208953313	1056.6004888574626	2	529.3079223632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_GC(Carbamidomethyl (C))AAVVAALLL_	TNFRSF25|p.A12V|1|0.61|ENSG00000215788|chr1:6466073-6466073|G/A|missense_variant	50.0245360154114	0.4207767895280948	6				NaN	NaN	0	NaN	9609	3585	13191
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13197	34.43	NaN	2892.3	30	0	338.39	0.035	+			39852	STLMSLPTK	9	62	489.2702391769699	NaN	0	489.2705078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STLMSLPTK_	ENSG00000158517|ENST00000289473|NCF1;nc|ENSG00000158517|P14598-2|NCF1;nc|ENSG00000165178|A8MVU1|NCF1C	76.16968421966216	0.08450868013726211	6				NaN	NaN	0	NaN	9610	3585	13191
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13198	34.431	NaN	2741	30	0	295.62	0.14	+			6779	CFEPANQM	8	53	498.6990745759209	NaN	0	498.69915771484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_C(Carbamidomethyl (C))FEPANQM_	ENSG00000075886|ENST00000321253|TUBA3D;ENSG00000123416|ENST00000336023|TUBA1B;ENSG00000127824|ENST00000248437|TUBA4A;ENSG00000152086|ENST00000312988|TUBA3E;ENSG00000167552|ENST00000301071|TUBA1A;ENSG00000167553|ENST00000301072|TUBA1C;ENSG00000198033|ENST00000400113|TUBA3C;nc|ENSG00000123416|P68363-2|TUBA1B;nc|ENSG00000127824|P68366-2|TUBA4A;nc|ENSG00000167552|Q71U36-2|TUBA1A;nc|ENSG00000198033|P0DPH7-2|TUBA3C;TUBA3C|p.T361Rfs*18|1|0.17|ENSG00000198033|chr13:19174136-19174136|G/-|frameshift_variant;TUBA3D|p.G366Efs*13|1|0.17|ENSG00000075886|chr2:131482588-131482588|G/-|frameshift_variant;TUBA3D|p.V328Pfs*54|1|0.45|ENSG00000075886|chr2:131480665-131480666|-/CCCAAAGA|frameshift_variant	44.116797842482775	1.7418937515398478	6				NaN	NaN	0	NaN	9611	3585	13191
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13216	34.47	NaN	19121	30	0	3641.2	0.214	+			8176	EAANTMVNY	9	81	506.7239750548615	1011.433397176523	2	506.72406005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EAANTMVNY_	ENSG00000011304|ENST00000356948|PTBP1;ENST00000586944.5_1_19:797434-805231:+|nuORF;nc|ENSG00000011304|P26599-1|PTBP1;nc|ENSG00000011304|P26599-2|PTBP1	159.27591364854348	0.004707062175358555	6				NaN	NaN	0	NaN	9626	3588	13215
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13217	34.473	NaN	27534	30	0	8638	0.106	+			15952	HAGLVYEY	8	71	476.2322661453451	950.4499793574902	2	476.2320251464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HAGLVYEY_	ENSG00000132141|ENST00000314144|CCT6B;ENSG00000146731|ENST00000275603|CCT6A;ENST00000492618.5_1_7:56127237-56129562:+|nuORF;ENST00000577307.1_1_17:33266566-33269658:-|nuORF;nc|ENSG00000132141|Q92526-2|CCT6B;nc|ENSG00000132141|Q92526-3|CCT6B;nc|ENSG00000146731|P40227-2|CCT6A	77.94384346573518	0.3407065481025094	6				NaN	NaN	0	NaN	9627	3588	13215
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13218	34.476	NaN	3862.2	30	0	504.66	0.106			+	20795	KIAINISVE	9	62	493.79740872763364	NaN	0	493.7973327636719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KIAINISVE_	REV__ENSG00000082212|ENST00000321341|ME2	49.44154591367651	0.21054156626303966	6				NaN	NaN	0	NaN	9628	3588	13215
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13219	34.477	NaN	4845.6	30	0	436.05	0.106	+			34030	RSLDNFFAK	9	70	549.2907302188455	1096.566907504491	2	549.2911376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RSLDNFFAK_	ENSG00000091527|ENST00000264993|CDV3;nc|ENSG00000091527|Q9UKY7-2|CDV3	93.5975768576971	0.05472259948179787	6				NaN	NaN	0	NaN	9629	3588	13215
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13220	34.479	NaN	2058	30	0	391.17	0.033			+	9259	EGVSHLLV	8	46	427.24219424265186	NaN	0	427.2425842285156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EGVSHLLV_	REV__ENST00000308595.9_1_11:67053337-67053520:+|nuORF	40.5726180659479	1.7418937515398478	6				NaN	NaN	0	NaN	9630	3588	13215
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13238	34.517	NaN	4575.4	30	0	659.04	0.214	+			11850	FTAPPVLGK	9	67	465.2763680032877	928.5381830733754	2	465.2760009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FTAPPVLGK_	ENSG00000126883|ENST00000359428|NUP214;nc|ENSG00000126883|P35658-2|NUP214;nc|ENSG00000126883|P35658-3|NUP214;nc|ENSG00000126883|P35658-4|NUP214;nc|ENSG00000126883|P35658-5|NUP214	90.77665401227738	0.06267569666681755	6				NaN	NaN	0	NaN	9645	3591	13237
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13239	34.52	NaN	4761.9	30	0	516.92	0.106			+	9513	EKVSETPIK	9	71	515.7948108378467	1029.5750687424934	2	516.2955322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EKVSETPIK_	REV__ENSG00000139324|ENST00000266712|TMTC3;REV__nc|ENSG00000139324|Q6ZXV5|TMTC3	60.11826168202944	0.21262886028301267	6				NaN	NaN	0	NaN	9646	3591	13237
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13240	34.522	NaN	3490	30	0	218.48	0.106			+	-1	TTSHKVNM	8	58	467.22709777307773	932.4396426129555	2	467.2270202636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_TTSHKVNM(Oxidation (M))_	REV__NAV3|p.A343T|1|0.31|ENSG00000067798|chr12:78006565-78006565|G/A|missense_variant	40.5726180659479	0.6527593143185008	6				NaN	NaN	0	NaN	9647	3591	13237
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13241	34.524	NaN	7494.6	30	0	915.98	0.106			+	11387	FLLVPRRG	8	75	479.30297787940003	956.5914028256001	2	479.27459716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FLLVPRRG_	REV__ENSG00000137266|ENST00000406686|SLC22A23;REV__nc|ENSG00000137266|A1A5C7-4|SLC22A23;REV__SLC22A23|p.E648Sfs*36|1|0.22|ENSG00000137266|chr6:3273174-3273174|C/-|frameshift_variant	28.2542754592877	0.7411748056684583	6				NaN	NaN	0	NaN	9648	3591	13237
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13242	34.526	NaN	2615.6	30	0	328.26	0.106			+	25757	LSAESETNGS	10	61	497.71856899348523	993.4225850537705	2	497.71917724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSAESETNGS_	REV__ENST00000483182.5_1_1:38478406-38483425:+|nuORF	52.936696900407355	0.4300801048568001	6				NaN	NaN	0	NaN	9649	3591	13237
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13243	34.528	NaN	1169.3	30	0	141.83	0.037	+			11395	FLPASETHPF	10	56	573.2842169699181	NaN	0	573.284912109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FLPASETHPF_	ENST00000430060.1_1_21:23157296-23158685:+|nuORF	24.20275056022122	0.4201028297492154	6				NaN	NaN	0	NaN	9650	3591	13237
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13261	34.565	NaN	32899	30	0	4801.6	0.214	+			8373	EALSLAHTY	9	78	502.7563060254857	1003.4980591177714	2	502.7560119628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EALSLAHTY_	ENSG00000151779|ENST00000281513|NBAS;NBAS|p.L1365Ifs*4|1|0.13|ENSG00000151779|chr2:15352075-15352078|AAAG/-|frameshift_variant;NBAS|p.N1064Tfs*12|1|0.31|ENSG00000151779|chr2:15394293-15394293|T/-|frameshift_variant;NBAS|p.Y1476Mfs*33|1|0.28|ENSG00000151779|chr2:15328234-15328234|A/-|frameshift_variant;nc|ENSG00000151779|A2RRP1-2|NBAS	177.70704754147502	0.0015262242528143724	6				NaN	NaN	0	NaN	9665	3594	13260
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13262	34.569	NaN	11000	30	0	2435.6	0.106	+			41842	SVSTPLIIK	9	76	479.30297787940003	956.5914028256001	2	479.30267333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVSTPLIIK_	ENSG00000029639|ENST00000367166|TFB1M	71.87747018426188	0.13267044672804276	6				NaN	NaN	0	NaN	9666	3594	13260
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13263	34.571	NaN	3811.9	30	0	428.42	0.106	+			45142	TVLKEIFAK	9	58	524.8241074255901	1047.6336619179801	2	524.8242797851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVLKEIFAK_	ENSG00000132698|ENST00000361084|RAB25	76.16968421966216	0.11411088698345859	6				NaN	NaN	0	NaN	9667	3594	13260
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13264	34.573	NaN	3715.2	30	0	357.54	0.106				-1	LTKLEQEK	8	68	515.7948108378467	1029.5750687424934	2	516.297119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LTKLEQEK_	ENST00000533506.5_1_14:50458977-50459738:-|nuORF	49.44154591367651	0.597725784090933	6				NaN	NaN	0	NaN	9668	3594	13260
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13265	34.575	NaN	1951.4	30	0	204.9	0.106			+	48712	VTTQTKPL	8	54	444.26341347183785	NaN	0	444.2631530761719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTTQTKPL_	REV__CFHR3|p.A123T|1|0.36|ENSG00000116785|chr1:196779910-196779910|G/A|missense_variant	51.33545320467046	1.7418937515398478	6				NaN	NaN	0	NaN	9669	3594	13260
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13266	34.576	NaN	5152.8	30	0	1146	0.034	+			18886	IVIETGPLK	9	61	485.3023688947819	NaN	0	485.30267333984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IVIETGPLK_	ENSG00000151657|ENST00000379562|KIN	77.31757898189308	0.08057531075035683	6				NaN	NaN	0	NaN	9670	3594	13260
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13267	34.577	NaN	4606.9	30	0	503.1	0.142	+			28847	NPVDWKEQY	9	73	589.7778043666713	1177.5410558001424	2	589.7783813476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NPVDWKEQY_	ENSG00000106397|ENST00000223127|PLOD3;ENST00000460132.5_1_7:100853286-100853899:-|nuORF	128.60217544463768	0.015992218256422188	6				NaN	NaN	0	NaN	9671	3594	13260
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13285	34.616	NaN	12113	30	0	5431.7	0.214	+			24377	LFSGKADITK	10	66	540.3086504356437	1078.6027479380873	2	540.3092651367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LFSGKADITK_	ENSG00000241322|ENST00000395906|FBXW10B	52.936696900407355	0.4300801048568001	6				NaN	NaN	0	NaN	9686	3597	13284
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13286	34.619	NaN	2235.6	30	0	152.75	0.106	+			37273	SLAGLGIDL	9	59	429.7500781176955	857.4856033021911	2	429.7499694824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLAGLGIDL_	ENST00000473996.1_1_3:48454981-48455344:-|nuORF	102.7733458925114	0.03637199559902695	6				NaN	NaN	0	NaN	9687	3597	13284
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13287	34.621	NaN	2487.5	30	0	162.6	0.106	+			33861	RRKPQPHSG	9	61	531.8001152205102	1061.5856775078203	2	531.8007202148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RRKPQPHSG_	ENSG00000170468|ENST00000304061|RIOX1	29.14955571784316	0.5308295550522326	6				NaN	NaN	0	NaN	9688	3597	13284
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13288	34.623	NaN	7707.2	30	0	1573.7	0.106	+			47852	VSLDYAISK	9	67	498.27439277517595	994.5342326171519	2	498.2740173339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSLDYAISK_	ENSG00000181220|ENST00000458143|ZNF746;ENSG00000204946|ENST00000434415|ZNF783;ENST00000472212.5_1_7:149248897-149318218:-|nuORF;ENST00000481762.5_1_7:149260692-149318218:-|nuORF;ENST00000486492.5_1_7:149255763-149318218:-|nuORF;ENST00000493198.5_1_7:149316940-149318218:-|nuORF;nc|ENSG00000181220|Q6NUN9-2|ZNF746;nc|ENSG00000181220|Q6NUN9|ZNF746;nc|ENSG00000204946|Q6ZMS7-1|ZNF783	138.06239232086	0.011389075116295402	6				NaN	NaN	0	NaN	9689	3597	13284
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13289	34.625	NaN	673.67	30	0	48.686	0.037			+	30874	QEKDTPYKE	9	39	569.27685546875	NaN	0	569.27685546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QEKDTPYKE_	REV__ENSG00000154305|ENST00000344922|MIA3;REV__ENST00000470521.1_1_1:222791452-222819114:+|nuORF;REV__MIA3|p.E729Nfs*3|1|0.09|ENSG00000154305|chr1:222629403-222629403|A/-|frameshift_variant;REV__MIA3|p.H496Vfs*10|1|0.04|ENSG00000154305|chr1:222628705-222628706|-/GTTTCCC|frameshift_variant;REV__MIA3|p.M993Nfs*3|1|0.25|ENSG00000154305|chr1:222630191-222630192|-/A|frameshift_variant;REV__MIA3|p.N746Kfs*10|1|0.35|ENSG00000154305|chr1:222629450-222629451|-/A|frameshift_variant;REV__MIA3|p.P1645Yfs*19|1|0.06|ENSG00000154305|chr1:222659963-222659964|-/TATAG|frameshift_variant;REV__MIA3|p.V974Sfs*4|1|0.36|ENSG00000154305|chr1:222630134-222630135|-/A|frameshift_variant;REV__nc|ENSG00000154305|Q5JRA6-2|MIA3;REV__nc|ENSG00000154305|Q5JRA6-3|MIA3	31.634271133179894	0.31785226469614103	6				NaN	NaN	0	NaN	9690	3597	13284
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13307	34.661	NaN	28137	30	0	2349.1	0.214	+			5246	ATVAVPLVGK	10	92	477.80291675971273	953.5912805862255	2	477.8024597167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATVAVPLVGK_	ENSG00000136986|ENST00000259512|DERL1;nc|ENSG00000136986|Q9BUN8-2|DERL1	115.49404669440601	0.03369372856552391	6				NaN	NaN	0	NaN	9705	3600	13306
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13308	34.665	NaN	6576.6	30	0	1331.7	0.106	+			49258	VVNVSPYLK	9	70	509.800151740889	1017.5857505485781	2	509.8003845214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVNVSPYLK_	ENSG00000167861|ENST00000425042|HID1;HID1|p.P773Lfs*8|1|0.17|ENSG00000167861|chr17:74951619-74951619|G/-|frameshift_variant;nc|ENSG00000167861|Q8IV36-2|HID1;nc|ENSG00000167861|Q8IV36-3|HID1	81.52500206392136	0.09095445986635249	6				NaN	NaN	0	NaN	9706	3600	13306
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13309	34.667	NaN	5173.7	30	0	696.73	0.106	+			8779	EEIIVKAM	8	72	466.75944730987305	931.5043416865461	2	466.75946044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EEIIVKAM_	ENSG00000122674|ENST00000325974|CCZ1;ENSG00000146574|ENST00000316731|CCZ1B;ENST00000467004.5_1_7:6838857-6844768:-|nuORF;ENST00000468078.1_1_7:6838857-6841171:-|nuORF;ENST00000474507.1_1_7:5959397-5965315:+|nuORF	47.91560031466742	0.6071945918984287	6				NaN	NaN	0	NaN	9707	3600	13306
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13310	34.669	NaN	5334.1	30	0	2098.1	0.106	+			35061	SAFDRILSSK	10	41	375.2085046233729	1122.6036844703187	3	375.2083435058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SAFDRILSSK_	ENSG00000141959|ENST00000349048|PFKL;ENST00000397961.6_1_21:45725201-45746742:+|nuORF;ENST00000466134.5_1_21:45735979-45739299:+|nuORF;nc|ENSG00000141959|P17858-2|PFKL;PFKL|p.P704Qfs*6|1|0.29|ENSG00000141959|chr21:44326177-44326177|C/-|frameshift_variant	43.650786325866115	0.5155049133366767	6				NaN	NaN	0	NaN	9708	3600	13306
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13311	34.671	NaN	5136.1	30	0	1230.4	0.106	+			27696	MPVNTNQNF	9	64	532.7452127687757	1063.4758726043513	2	532.7459106445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MPVNTNQNF_	ENSG00000136021|ENST00000360820|SCYL2	82.24051045832904	0.08786059719216216	6				NaN	NaN	0	NaN	9709	3600	13306
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13312	34.672	NaN	3583.6	30	0	252.09	0.033			+	50176	WLGVSQPN	8	55	450.73383391588027	NaN	0	450.73370361328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_WLGVSQPN_	REV__ENST00000265978.8_1_11:6245654-6255937:-|nuORF	35.61828744233558	1.7418937515398478	6				NaN	NaN	0	NaN	9710	3600	13306
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13313	34.673	NaN	3016.5	30	0	321.27	0.14	+			22970	KVRALLVEP	9	65	512.8307449015036	1023.6469368698073	2	512.82958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KVRALLVEP_	ENSG00000198959|ENST00000361475|TGM2;ENST00000469269.1_1_20:36758623-36761344:-|nuORF	63.30626980617807	0.18605348971131092	6				NaN	NaN	0	NaN	9711	3600	13306
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13331	34.711	NaN	31677	30	0	11097	0.214			+	13114	GGGGGRSGAL	10	57	394.7043667509497	787.3941805686994	2	394.7041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GGGGGRSGAL_	REV__ENST00000342160.7_2_X:53707007-53711004:-|nuORF	51.33545320467046	0.4446945571623749	6				NaN	NaN	0	NaN	9726	3603	13330
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13332	34.714	NaN	9817.2	30	0	1077.5	0.106	+			28851	NPVEDKDAVAF	11	79	602.7961729791906	1203.577793025181	2	602.7958374023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NPVEDKDAVAF_	CEACAM6|p.I217Mfs*11|3|0.07|ENSG00000086548|chr19:41761474-41761475|-/G|frameshift_variant;ENSG00000079385|ENST00000161559|CEACAM1;ENSG00000086548|ENST00000199764|CEACAM6;ENSG00000124469|ENST00000244336|CEACAM8;ENST00000344391.9_1_19:43023158-43032553:-|nuORF;ENST00000377806.7_1_19:43023094-43032607:-|nuORF;ENST00000403136.1_1_19:43025413-43032607:-|nuORF;nc|ENSG00000079385|P13688-10|CEACAM1;nc|ENSG00000079385|P13688-11|CEACAM1;nc|ENSG00000079385|P13688-2|CEACAM1;nc|ENSG00000079385|P13688-3|CEACAM1;nc|ENSG00000079385|P13688-4|CEACAM1;nc|ENSG00000079385|P13688-5|CEACAM1;nc|ENSG00000079385|P13688-6|CEACAM1;nc|ENSG00000079385|P13688-8|CEACAM1;nc|ENSG00000079385|P13688-9|CEACAM1	94.4091291819064	0.0807249280027251	6				NaN	NaN	0	NaN	9727	3603	13330
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13333	34.716	NaN	3053.5	30	0	312.09	0.106	+			7834	DPVVADYKY	9	60	535.2634778872977	1068.5124028413952	2	535.263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DPVVADYKY_	ENSG00000132170|ENST00000651735|PPARG;ENST00000477039.5_1_3:12393091-12447643:+|nuORF;nc|ENSG00000132170|P37231-2|PPARG;nc|ENSG00000132170|P37231-3|PPARG;nc|ENSG00000132170|P37231|PPARG;PPARG|p.L298Cfs*38|1|0.26|ENSG00000132170|chr3:12416771-12416771|C/-|frameshift_variant;PPARG|p.S186Vfs*47|1|0.08|ENSG00000132170|chr3:12392683-12392683|A/-|frameshift_variant	68.62578634547417	0.14673074753754126	6				NaN	NaN	0	NaN	9728	3603	13330
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13334	34.718	NaN	2398.6	30	0	460.83	0.106			+	-1	AQHLHMKAG	9	64	504.7555058114054	1007.4964586896108	2	504.7555236816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_AQHLHM(Oxidation (M))KAG_	REV__CC2D1A|p.R525H|1|0.2|ENSG00000132024|chr19:13920855-13920855|G/A|missense_variant	30.503639358989545	0.5181749237905803	6				NaN	NaN	0	NaN	9729	3603	13330
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13335	34.72	NaN	2640	30	0	327.36	0.106	+			18309	IPSSVIHPAM	10	68	526.2837612127958	1050.5529694923914	2	526.2841186523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IPSSVIHPAM_	ENSG00000115211|ENST00000347454|EIF2B4;nc|ENSG00000115211|Q9UI10-2|EIF2B4;nc|ENSG00000115211|Q9UI10-3|EIF2B4	58.78195531508484	0.37691818691852547	6				NaN	NaN	0	NaN	9730	3603	13330
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13336	34.722	NaN	3213.1	30	0	679.74	0.035	+			25348	LPEGDALRY	9	67	517.2688069336036	1032.5230609340072	2	517.2693481445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LPEGDALRY_	ENSG00000117139|ENST00000367265|KDM5B;nc|ENSG00000117139|Q9UGL1-2|KDM5B	85.16082228582465	0.07850854922700509	6				NaN	NaN	0	NaN	9731	3603	13330
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13337	34.722	NaN	4165.1	30	0	425.77	0.139	+			26892	LWSGKELL	8	66	473.27295268877	944.53135244434	2	473.2753601074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LWSGKELL_	ENST00000529143.1_1_8:146077992-146078037:-|nuORF	44.116797842482775	0.6307669463330267	6				NaN	NaN	0	NaN	9732	3603	13330
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13355	34.76	NaN	39674	30	0	8858.7	0.214			+	21414	KMSEIQEK	8	90	496.7579879571382	991.5014229810764	2	498.2557373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KMSEIQEK_	REV__NLRP10|p.M552I|1|0.39|ENSG00000182261|chr11:7959956-7959956|C/A|missense_variant	51.33545320467046	0.5859736979383976	6				NaN	NaN	0	NaN	9747	3606	13354
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13356	34.764	NaN	18464	30	0	1425.5	0.106	+			2499	APSVVKISY	9	86	482.2805466595171	962.5465403858342	2	482.2791748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_APSVVKISY_	ENSG00000080503|ENST00000349721|SMARCA2;nc|ENSG00000080503|P51531-2|SMARCA2	114.8945686534367	0.024290463251177924	6				NaN	NaN	0	NaN	9748	3606	13354
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13357	34.766	NaN	11260	30	0	2595.3	0.106			+	1079	AELAKVEL	8	60	436.7582332551146	871.5019135770292	2	436.75775146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AELAKVEL_	REV__TNRC6B|p.L546Sfs*63|1|0.35|ENSG00000100354|chr22:40265862-40265862|C/-|frameshift_variant	101.25262130126117	0.2499877059228457	6				NaN	NaN	0	NaN	9749	3606	13354
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13358	34.768	NaN	4542.8	30	0	643.79	0.106			+	24182	LEPQVIKV	8	58	463.2895189418569	924.5644849505138	2	463.2891540527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LEPQVIKV_	REV__ENSG00000111700|ENST00000381545|SLCO1B3;REV__ENSG00000134538|ENST00000256958|SLCO1B1;REV__nc|ENSG00000111700|Q9NPD5-2|SLCO1B3	60.97194046774394	0.49215940876911696	6				NaN	NaN	0	NaN	9750	3606	13354
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13359	34.77	NaN	6659.5	30	0	1220.4	0.106	+			41929	SVVNSFIEK	9	69	511.77915915061647	1021.543765368033	2	511.7795104980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVVNSFIEK_	ENSG00000136159|ENST00000258662|NUDT15;NUDT15|p.N117Mfs*25|1|0.37|ENSG00000136159|chr13:48041105-48041105|A/-|frameshift_variant	49.536043120802724	0.308405419312776	6				NaN	NaN	0	NaN	9751	3606	13354
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13360	34.771	NaN	3681.2	30	0	410.67	0.034	+			24526	LGLAYVLAN	9	62	467.2734604813377	932.5323680294754	2	467.27374267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LGLAYVLAN_	ENSG00000139974|ENST00000267488|SLC38A6;ENST00000529345.6_1_14:61448346-61550389:+|nuORF;ENST00000532148.5_1_14:61447983-61468748:+|nuORF;nc|ENSG00000139974|Q8IZM9-2|SLC38A6;SLC38A6|p.G74S|1|0.19|ENSG00000139974|chr14:60982622-60982622|G/A|missense_variant;SLC38A6|p.K213Nfs*8|1|0.24|ENSG00000139974|chr14:61043156-61043156|A/-|frameshift_variant;SLC38A6|p.L372*|1|0.38|ENSG00000139974|chr14:61051846-61051846|T/-|frameshift_variant;SLC38A6|p.L372Ffs*19|1|0.42|ENSG00000139974|chr14:61051845-61051846|-/T|frameshift_variant	54.76467175910256	0.25725661233076036	6				NaN	NaN	0	NaN	9752	3606	13354
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13361	34.772	NaN	1335	30	0	204.12	0.141	+			11549	FPIFVALLY	9	57	541.8170074628911	1081.619461992582	2	541.817626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FPIFVALLY_	ENST00000413432.2_1_2:242383334-242383583:+|nuORF	29.841539824830324	0.5243625958137083	6				NaN	NaN	0	NaN	9753	3606	13354
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13379	34.809	NaN	396590	30	0	122610	0.133	+			4247	ATGDMSGLLK	10	80	496.7579879571382	991.5014229810764	2	496.758544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATGDMSGLLK_	ENSG00000127837|ENST00000248450|AAMP;ENST00000475678.5_1_2:219131145-219134809:-|nuORF;ENST00000489767.5_1_2:219130391-219134818:-|nuORF	173.39201167336012	0.002607008819474693	6				NaN	NaN	0	NaN	9768	3609	13378
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13380	34.812	NaN	3992.3	30	0	316.54	0.106			+	26740	LVLVMPLAV	9	68	485.8017746325038	969.5889963318076	2	485.8013610839844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LVLVM(Oxidation (M))PLAV_	REV__ENSG00000139626|ENST00000267082|ITGB7;REV__ENST00000549462.1_1_12:53591166-53600997:-|nuORF;REV__nc|ENSG00000139626|P26010-2|ITGB7	60.403631409065575	0.21025000616765316	6				NaN	NaN	0	NaN	9769	3609	13378
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13381	34.814	NaN	3149.1	30	0	196.16	0.106	+			11510	FPDKPITQY	9	73	554.7872625225509	1107.5599721119017	2	554.7885131835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FPDKPITQY_	ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656-2|DDOST;nc|ENSG00000244038|P39656-3|DDOST;nc|ENSG00000244038|P39656|DDOST	51.52775601994872	0.28504342437107444	6				NaN	NaN	0	NaN	9770	3609	13378
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13382	34.815	NaN	2762.7	30	0	1016.4	0.106	+			28656	NLLIVQIFQ	9	50	544.329463531219	1086.6443741292378	2	544.3300170898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NLLIVQIFQ_	ENST00000533478.5_1_16:81174978-81214887:-|nuORF;nc|ENSG00000166473|Q7Z442-2|PKD1L2;nc|ENSG00000166473|Q7Z442|PKD1L2	49.44154591367651	0.3095138337212152	6				NaN	NaN	0	NaN	9771	3609	13378
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13383	34.817	NaN	1634.7	30	0	172.61	0.106			+	11828	FSVPPGKF	8	51	439.74283328198834	877.4711136307767	2	439.7413330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FSVPPGKF_	REV__COL5A3|p.P1048Lfs*96|1|0.25|ENSG00000080573|chr19:9977456-9977456|G/-|frameshift_variant;REV__ENSG00000080573|ENST00000264828|COL5A3	60.97194046774394	0.49215940876911696	6				NaN	NaN	0	NaN	9772	3609	13378
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13384	34.819	NaN	2847.2	30	0	549.47	0.106	+			51148	YPAAKGGFQV	10	61	519.2744650493299	1036.5343771654598	2	519.2744750976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YPAAKGGFQV_	ENSG00000120738|ENST00000239938|EGR1	44.116797842482775	0.5112108506279902	6				NaN	NaN	0	NaN	9773	3609	13378
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13385	34.821	NaN	5896.8	30	0	822.81	0.034			+	22220	KSVPFAALL	9	69	473.29377762271014	944.5730023122203	2	473.29412841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KSVPFAALL_	REV__ENSG00000120278|ENST00000696526|PLEKHG1;REV__PLEKHG1|p.S974Afs*5|1|0.07|ENSG00000120278|chr6:150832027-150832027|A/-|frameshift_variant	53.351449002276354	0.2690372970092375	6				NaN	NaN	0	NaN	9774	3609	13378
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13403	34.857	NaN	8836.6	30	0	2169.7	0.214	+			42938	TEIPVRAL	8	63	449.7715297564023	897.5285065796046	2	449.77166748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEIPVRAL_	ENSG00000133067|ENST00000367278|LGR6;ENST00000308543.3_1_1:202245458-202272411:+|nuORF;ENST00000506931.1_1_1:202245458-202249981:+|nuORF;nc|ENSG00000133067|Q9HBX8-2|LGR6	58.78195531508484	0.5138399468736706	6				NaN	NaN	0	NaN	9789	3612	13402
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13404	34.861	NaN	3713.9	30	0	1035.4	0.106	+			759	AEEKLNYKM	9	69	563.2818620107475	1124.549171088295	2	563.2845458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEEKLNYKM_	ENSG00000197457|ENST00000370053|STMN3;nc|ENSG00000197457|Q9NZ72-2|STMN3	93.19546047674547	0.05585629608842056	6				NaN	NaN	0	NaN	9790	3612	13402
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13405	34.863	NaN	6091.2	30	0	1403.8	0.106	+			19458	KARVAFMKL	9	77	540.3219584674362	1078.6293640016722	2	540.322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_KARVAFM(Oxidation (M))KL_	tr|U7SZI6|U7SZI6_FUSNUATP-bindingcassette,subfamilyF,member3OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00767PE=4SV=1	51.33545320467046	0.2872990594074956	6				NaN	NaN	0	NaN	9791	3612	13402
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13406	34.865	NaN	2092.1	30	0	279.9	0.106	+			526	ACVIVFRF	8	60	506.27713116288305	1010.5397093925661	2	506.2771911621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_AC(Carbamidomethyl (C))VIVFRF_	ENSG00000102452|ENST00000251127|NALCN	46.76643321282427	0.6143254112625767	6				NaN	NaN	0	NaN	9792	3612	13402
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13407	34.866	NaN	2400.9	30	0	143.22	0.106			+	47889	VSLGWGLSGE	10	66	502.7563060254857	1003.4980591177714	2	502.7933349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSLGWGLSGE_	REV__ENST00000360943.9_1_17:47004499-47005111:+|nuORF	39.252832667884924	0.5560298534376815	6				NaN	NaN	0	NaN	9793	3612	13402
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13408	34.868	NaN	2695.5	30	0	299	0.036				-1	YQDPVTLPC	9	59	546.7553021884158	1091.4960514436316	2	546.7555541992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_YQDPVTLPC(Carbamidomethyl (C))_	ENSG00000141569|ENST00000269383|TRIM65	31.954861631926434	0.5046124803899898	6				NaN	NaN	0	NaN	9794	3612	13402
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13409	34.869	NaN	2727.9	30	0	184.78	0.14	+			29925	PLTPPITQY	9	72	515.2828331128503	1028.5511132925005	2	515.2830810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PLTPPITQY_	ENSG00000134030|ENST00000256413|CTIF;ENST00000587860.1_1_18:46287547-46385927:+|nuORF;nc|ENSG00000134030|O43310-2|CTIF	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	9795	3612	13402
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13427	34.906	NaN	4404.7	30	0	377.51	0.214	+			51217	YPTEDYKVY	9	74	589.2747324495914	1176.5349119659827	2	589.2743530273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YPTEDYKVY_	ENSG00000167515|ENST00000696289|TRAPPC2L;ENST00000564547.1_1_16:88923507-88925305:+|nuORF;ENST00000565309.1_1_16:88925068-88926212:+|nuORF;nc|ENSG00000167515|Q9UL33|TRAPPC2L	127.46168284122857	0.016682644177004526	6				NaN	NaN	0	NaN	9810	3615	13426
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13428	34.91	NaN	7619.3	30	0	950.91	0.106	+			1909	AIQLPISSK	9	68	478.79250991902535	955.5704669048507	2	478.7919616699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AIQLPISSK_	ENST00000518468.1_3_8:53599460-53658116:-|nuORF	77.31757898189308	0.1091473830098891	6				NaN	NaN	0	NaN	9811	3615	13426
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13429	34.912	NaN	2990.2	30	0	822.64	0.106	+			32537	QVSNWFGNK	9	59	540.2670690934192	1078.5195852536383	2	540.2674560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QVSNWFGNK_	ENSG00000105717|ENST00000251203|PBX4;ENSG00000167081|ENST00000373489|PBX3;ENSG00000185630|ENST00000420696|PBX1;ENSG00000204304|ENST00000375050|PBX2;ENST00000478678.5_1_6:32154995-32157692:-|nuORF;ENST00000538998.1_1_9:128606084-128725334:+|nuORF;ENST00000557978.6_1_19:19672836-19680924:-|nuORF;ENST00000558222.1_1_19:19675736-19681567:-|nuORF;nc|ENSG00000167081|P40426-2|PBX3;nc|ENSG00000167081|P40426-3|PBX3;nc|ENSG00000167081|P40426-4|PBX3;nc|ENSG00000167081|P40426-5|PBX3;nc|ENSG00000185630|P40424-2|PBX1;nc|ENSG00000185630|P40424-3|PBX1	32.81241826257853	0.4965981579233955	6				NaN	NaN	0	NaN	9812	3615	13426
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13430	34.914	NaN	3442.8	30	0	1284.9	0.106				-1	 	0	40	379.20976466940556	756.4049764056111	2	379.209228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9813	3615	13426
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13431	34.916	NaN	4774.3	30	0	662.82	0.106	+			10754	FAENGTVQY	9	67	514.7379900554329	1027.4614271776657	2	514.7379150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FAENGTVQY_	ENSG00000100417|ENST00000216259|PMM1;ENST00000472620.5_1_22:41980283-41985061:-|nuORF;ENST00000478337.1_1_22:41980122-41985809:-|nuORF;ENST00000482178.5_1_22:41980283-41980722:-|nuORF;ENST00000485648.5_1_22:41980283-41985809:-|nuORF;PMM1|p.E103Sfs*6|1|0.05|ENSG00000100417|chr22:41584348-41584348|C/-|frameshift_variant	95.81516180277367	0.04847050768394289	6				NaN	NaN	0	NaN	9814	3615	13426
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13432	34.918	NaN	3008.3	30	0	597.01	0.035	+			48680	VTTCTVTCGL	10	69	499.2385899478067	996.4626269624134	2	499.2378234863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTTCTVTCGL_	TMEM81|p.A46V|1|0.09|ENSG00000174529|chr1:205084184-205084184|G/A|missense_variant	34.172542307311794	0.6007644933930345	6				NaN	NaN	0	NaN	9815	3615	13426
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13433	34.918	NaN	2922	30	0	322.85	0.14	+			50722	YEGYALPHA	9	69	510.74259222109424	1019.4706315089885	2	510.74237060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YEGYALPHA_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2	60.29395666154354	0.21116425950210296	6				NaN	NaN	0	NaN	9816	3615	13426
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13451	34.957	NaN	9612.3	30	0	1452.5	0.214	+			33412	RIGGISGIFK	10	84	524.3192361314761	1046.6239193297522	2	524.3193969726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RIGGISGIFK_	DBR1|p.S129F|1|0.37|ENSG00000138231|chr3:138171650-138171650|G/A|missense_variant;DBR1|p.S224Lfs*6|1|0.26|ENSG00000138231|chr3:138167125-138167125|A/-|frameshift_variant;DBR1|p.Y142Lfs*2|1|0.38|ENSG00000138231|chr3:138170173-138170174|-/G|frameshift_variant;ENSG00000138231|ENST00000260803|DBR1;ENST00000463982.2_1_3:137890290-137893637:-|nuORF	108.31271852315183	0.05301033373712667	6				NaN	NaN	0	NaN	9831	3618	13450
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13452	34.961	NaN	19424	30	0	8684.8	0.106	+			40236	STSFLEKFK	9	53	362.865772930076	1085.575489390428	3	362.8658447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STSFLEKFK_	nc|ENSG00000235818|Q8TDU5|VN1R17P	30.503639358989545	0.5181749237905803	6				NaN	NaN	0	NaN	9832	3618	13450
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13453	34.963	NaN	3004.1	30	0	512.12	0.106	+			2268	ALWFLMKQ	8	66	518.7873417748619	1035.5601306165238	2	518.7874145507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ALWFLMKQ_	ENST00000484998.5_1_20:2635830-2636687:+|nuORF	38.80614096846853	0.6637206697844082	6				NaN	NaN	0	NaN	9833	3618	13450
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13454	34.965	NaN	3071.3	30	0	416.03	0.106	+			46151	VDRLVAQI	8	58	457.2768591783711	912.5391654235423	2	457.2765808105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VDRLVAQI_	ENSG00000165879|ENST00000371021|FRAT1;ENSG00000181274|ENST00000371019|FRAT2	63.30626980617807	0.4690498839812213	6				NaN	NaN	0	NaN	9834	3618	13450
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13455	34.967	NaN	2986.3	30	0	1075.9	0.106	+			30066	PQGTGPFL	8	41	408.7163549542404	815.4181569752808	2	408.716064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PQGTGPFL_	ENST00000379619.5_1_2:28636364-28636718:+|nuORF	44.53106598305862	0.628196326904373	6				NaN	NaN	0	NaN	9835	3618	13450
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13456	34.969	NaN	1241.3	30	0	131.18	0.033	+			25809	LSCLGASLQ	9	57	446.23382748067536	890.4531020281507	2	446.2335510253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSCLGASLQ_	ENSG00000117983|ENST00000529681|MUC5B;ENST00000525715.5_1_11:1244314-1260349:+|nuORF;MUC5B|p.A1645Gfs*130|1|0.48|ENSG00000117983|chr11:1241806-1241807|-/C|frameshift_variant;MUC5B|p.E2447Vfs*233|1|0.15|ENSG00000117983|chr11:1244218-1244219|TG/-|frameshift_variant;MUC5B|p.E2929Gfs*98|1|0.13|ENSG00000117983|chr11:1245660-1245661|-/GC|frameshift_variant;MUC5B|p.F1125Lfs*31|1|0.34|ENSG00000117983|chr11:1238947-1238948|TC/-|frameshift_variant;MUC5B|p.P2717Qfs*3|2|0.21|ENSG00000117983|chr11:1245025-1245025|C/-|frameshift_variant;MUC5B|p.P3417Qfs*3|1|0.41|ENSG00000117983|chr11:1247125-1247125|C/-|frameshift_variant;MUC5B|p.S2205Qfs*54|1|0.2|ENSG00000117983|chr11:1243486-1243487|-/C|frameshift_variant;MUC5B|p.S3126Pfs*13|1|0.37|ENSG00000117983|chr11:1246251-1246251|C/-|frameshift_variant;MUC5B|p.S3878Pfs*27|1|0.13|ENSG00000117983|chr11:1248507-1248507|C/-|frameshift_variant;MUC5B|p.S4017Lfs*56|1|0.22|ENSG00000117983|chr11:1248928-1248929|-/C|frameshift_variant;MUC5B|p.T4706Pfs*4|2|0.37|ENSG00000117983|chr11:1250996-1250996|A/-|frameshift_variant	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	9836	3618	13450
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13457	34.969	NaN	2575.2	30	0	214.23	0.141			+	37175	SIYEIAFQR	9	67	563.7975094870555	1125.580466040911	2	563.78125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SIYEIAFQR_	REV__ENSG00000178177|ENST00000635767|LCORL;REV__nc|ENSG00000178177|Q8N3X6-3|LCORL;REV__nc|ENSG00000178177|Q8N3X6|LCORL	30.317721548370564	0.5199124245378496	6				NaN	NaN	0	NaN	9837	3618	13450
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13475	35.009	NaN	25785	30	0	3186.2	0.214			+	13477	GLLGATAIIK	10	80	478.81068488797837	955.6068168427568	2	478.8103942871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GLLGATAIIK_	REV__tr|U7ST96|U7ST96_FUSNUHeavymetaltranslocatingP-typeATPaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01272PE=3SV=1	104.0567914643314	0.06564926686336217	6				NaN	NaN	0	NaN	9852	3621	13474
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13476	35.012	NaN	7694.9	30	0	655.3	0.106			+	51258	YRCLLSLLI	9	71	547.3256655209597	1092.6367781087192	2	547.3258666992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YRCLLSLLI_	REV__KIAA0586|p.K791Rfs*14|1|0.33|ENSG00000100578|chr14:58467891-58467891|A/-|frameshift_variant	56.72105179125745	0.24094814563026265	6				NaN	NaN	0	NaN	9853	3621	13474
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13477	35.014	NaN	15863	30	0	5304.8	0.106	+			4591	ATLGDLKLVEK	11	59	396.2397966042821	1185.6975604130464	3	396.2393798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATLGDLKLVEK_	ENSG00000129083|ENST00000439561|COPB1	30.317721548370564	0.6717830234747728	6				NaN	NaN	0	NaN	9854	3621	13474
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13478	35.016	NaN	1812.1	30	0	222.95	0.106	+			11564	FPLPSMYR	8	62	505.7614380662357	1009.5083231992714	2	505.7611083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FPLPSMYR_	ENSG00000145979|ENST00000379300|TBC1D7;ENST00000607532.5_1_6:13307806-13327130:-|nuORF;nc|ENSG00000145979|Q9P0N9-4|TBC1D7	40.5726180659479	0.6527593143185008	6				NaN	NaN	0	NaN	9855	3621	13474
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13479	35.018	NaN	2822.4	30	0	607.93	0.106			+	792	AEFKKAHH	8	57	484.2586036801443	966.5026544270886	2	484.25830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEFKKAHH_	REV__ENSG00000171720|ENST00000305264|HDAC3;REV__ENST00000469550.6_1_5:141001037-141014565:-|nuORF;REV__nc|ENSG00000171720|O15379-2|HDAC3	47.91560031466742	0.6071945918984287	6				NaN	NaN	0	NaN	9856	3621	13474
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13480	35.02	NaN	5535.3	30	0	893.42	0.035			+	38736	SSLMFSEIK	9	67	521.2686279673927	1040.5227030015853	2	521.2681274414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSLMFSEIK_	REV__ENST00000484575.1_1_2:209101805-209104899:-|nuORF	44.377184641726394	0.36891676396732553	6				NaN	NaN	0	NaN	9857	3621	13474
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13481	35.02	NaN	2738.9	30	0	359.89	0.142			+	29561	PEVVAHYLAQ	10	71	563.7975094870555	1125.580466040911	2	563.7958374023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PEVVAHYLAQ_	REV__ENSG00000100249|ENST00000216071|C22orf31	31.529811441608018	0.6223461015008678	6				NaN	NaN	0	NaN	9858	3621	13474
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13499	35.058	NaN	10705	30	0	1804.5	0.215	+			16467	HETGIAISV	9	67	463.7506433424837	925.4867337517675	2	463.750244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HETGIAISV_	ENSG00000095380|ENST00000210444|NANS	51.33545320467046	0.2872990594074956	6				NaN	NaN	0	NaN	9873	3624	13498
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13500	35.062	NaN	7555.7	30	0	1528.8	0.106	+			35305	SAMESFIEK	9	71	521.2496885662302	1040.4848241992604	2	521.2498168945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAMESFIEK_	ENSG00000120451|ENST00000265909|SNX19;ENST00000527451.1_1_11:130773148-130776010:-|nuORF	98.58198989935565	0.04066992115528678	6				NaN	NaN	0	NaN	9874	3624	13498
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13501	35.064	NaN	20680	30	0	4749.8	0.106			+	-1	VTLMKLILQ	9	82	358.89121266747986	1073.6518086026397	3	358.8911437988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_VTLM(Oxidation (M))KLILQ_	REV__ENSG00000188906|ENST00000298910|LRRK2;REV__LRRK2|p.A352Tfs*4|1|0.06|ENSG00000188906|chr12:40251327-40251333|GCCTGTT/-|frameshift_variant;REV__LRRK2|p.I435Yfs*9|1|0.39|ENSG00000188906|chr12:40257258-40257258|A/-|frameshift_variant;REV__LRRK2|p.K1328Rfs*8|1|0.21|ENSG00000188906|chr12:40308485-40308485|A/-|frameshift_variant;REV__LRRK2|p.K535Nfs*13|2|0.28|ENSG00000188906|chr12:40263845-40263845|A/-|frameshift_variant;REV__LRRK2|p.K906Rfs*8|1|0.29|ENSG00000188906|chr12:40293568-40293568|A/-|frameshift_variant;REV__LRRK2|p.L818Dfs*10|1|0.07|ENSG00000188906|chr12:40284084-40284085|-/GACTGCT|frameshift_variant;REV__LRRK2|p.N2261Kfs*9|1|0.28|ENSG00000188906|chr12:40356119-40356120|-/A|frameshift_variant;REV__LRRK2|p.N710Mfs*2|1|0.49|ENSG00000188906|chr12:40278144-40278144|A/-|frameshift_variant;REV__LRRK2|p.R1639Gfs*15|1|0.59|ENSG00000188906|chr12:40320068-40320068|A/-|frameshift_variant;REV__LRRK2|p.R1639Kfs*13|1|0.36|ENSG00000188906|chr12:40320067-40320068|-/A|frameshift_variant	61.691277971877994	0.19951612995419254	6				NaN	NaN	0	NaN	9875	3624	13498
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13502	35.066	NaN	8575.1	30	0	1981.4	0.106	+			48487	VTMKEILLK	9	72	537.833485394644	1073.6524178560878	2	537.833740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTMKEILLK_	ENSG00000119487|ENST00000265960|MAPKAP1;nc|ENSG00000119487|Q9BPZ7-2|MAPKAP1;nc|ENSG00000119487|Q9BPZ7-3|MAPKAP1;nc|ENSG00000119487|Q9BPZ7-4|MAPKAP1;nc|ENSG00000119487|Q9BPZ7-5|MAPKAP1;nc|ENSG00000119487|Q9BPZ7-6|MAPKAP1	89.02883481214508	0.06760336634167786	6				NaN	NaN	0	NaN	9876	3624	13498
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13503	35.068	NaN	2607.8	30	0	351.67	0.106	+			27581	MPKDLNVGQ	9	55	501.25856131509425	1000.5025696969885	2	501.25799560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MPKDLNVGQ_	ENSG00000147724|ENST00000395297|FAM135B;ENST00000482951.6_1_8:139144838-139379577:-|nuORF;nc|ENSG00000147724|Q49AJ0-2|FAM135B;nc|ENSG00000147724|Q49AJ0-3|FAM135B;nc|ENSG00000147724|Q49AJ0-4|FAM135B	27.882242232435846	0.5426732730940306	6				NaN	NaN	0	NaN	9877	3624	13498
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13504	35.069	NaN	1195.5	30	0	385.25	0.036	+			42008	SVYNKKRR	8	31	350.8777950989871	NaN	0	350.8778381347656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVYNKKRR_	ENSG00000189042|ENST00000682579|ZNF567;nc|ENSG00000189042|Q8N184-1|ZNF567;nc|ENSG00000189042|Q8N184-2|ZNF567;ZNF567|p.A246V|1|0.31|ENSG00000189042|chr19:36719461-36719461|C/T|missense_variant;ZNF567|p.H253Tfs*5|1|0.37|ENSG00000189042|chr19:36719472-36719473|-/A|frameshift_variant;ZNF567|p.R581Tfs*8|1|0.07|ENSG00000189042|chr19:36720466-36720470|GAACT/-|frameshift_variant;ZNF567|p.T332Gfs*16|1|0.18|ENSG00000189042|chr19:36719718-36719721|ACAG/-|frameshift_variant	30.503639358989545	1.7418937515398478	6				NaN	NaN	0	NaN	9878	3624	13498
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13505	35.07	NaN	2533.7	30	0	251.7	0.14			+	35097	SAGARPPPARG	11	68	518.7873417748619	1035.5601306165238	2	518.7872924804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SAGARPPPARG_	REV__ENST00000585457.5_1_17:42254041-42254848:-|nuORF;REV__nc|ENSG00000267080|Q495Z4|ASB16-AS1	34.08650109265054	0.6322515996262609	6				NaN	NaN	0	NaN	9879	3624	13498
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13523	35.106	NaN	11808	30	0	2813.2	0.214			+	50145	WIVILNGL	8	68	464.2851484230099	926.5557439128198	2	464.2845153808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WIVILNGL_	REV__ENSG00000169836|ENST00000304883|TACR3	83.28718786952967	0.2977916691876266	6				NaN	NaN	0	NaN	9894	3627	13522
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13524	35.11	NaN	11294	30	0	664.07	0.106	+			42361	TAIEKVVQM	9	75	509.7840393378157	1017.5535257424315	2	509.7840270996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAIEKVVQM_	ENSG00000142627|ENST00000358432|EPHA2	72.87924865735499	0.12833875048249987	6				NaN	NaN	0	NaN	9895	3627	13522
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13525	35.112	NaN	7086.3	30	0	1134.2	0.106	+			27534	MPAETIKEL	9	76	516.2759652268498	1030.5373775204996	2	516.2757568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MPAETIKEL_	ENSG00000122870|ENST00000373886|BICC1;nc|ENSG00000122870|Q9H694-2|BICC1	126.24258497203832	0.01742065577488747	6				NaN	NaN	0	NaN	9896	3627	13522
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13526	35.114	NaN	5110.6	30	0	819.24	0.106	+			35911	SEFPAARL	8	58	445.740149966892	889.465747000584	2	445.739990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SEFPAARL_	BCOR|p.K1061Sfs*52|1|0.28|ENSG00000183337|chrX:40071029-40071029|T/-|frameshift_variant;BCOR|p.K839Qfs*5|1|0.26|ENSG00000183337|chrX:40072831-40072832|-/G|frameshift_variant;BCOR|p.K839Sfs*17|1|0.41|ENSG00000183337|chrX:40072832-40072832|G/-|frameshift_variant;BCOR|p.L1646Sfs*28|1|0.06|ENSG00000183337|chrX:40053926-40053926|G/-|frameshift_variant;BCOR|p.L487Hfs*13|1|0.67|ENSG00000183337|chrX:40073886-40073887|-/GTGT|frameshift_variant;BCOR|p.N529Tfs*60|1|0.51|ENSG00000183337|chrX:40073760-40073760|T/-|frameshift_variant;BCOR|p.P1621Qfs*53|2|0.52|ENSG00000183337|chrX:40054000-40054000|G/-|frameshift_variant;BCOR|p.R1215Kfs*30|1|0.14|ENSG00000183337|chrX:40063811-40063812|-/T|frameshift_variant;ENSG00000183337|ENST00000378444|BCOR;ENST00000490976.5_1_X:39931586-39937182:-|nuORF;nc|ENSG00000183337|Q6W2J9-2|BCOR;nc|ENSG00000183337|Q6W2J9-3|BCOR;nc|ENSG00000183337|Q6W2J9-4|BCOR	45.9519527083369	0.6193794311207887	6				NaN	NaN	0	NaN	9897	3627	13522
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13527	35.116	NaN	1897.6	30	0	250.45	0.106	+			28976	NSIFYGPPG	9	54	476.2322661453451	950.4499793574902	2	476.2317810058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NSIFYGPPG_	tr|U7SYW1|U7SYW1_FUSNUATPaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00939PE=3SV=1	29.14955571784316	0.5308295550522326	6				NaN	NaN	0	NaN	9898	3627	13522
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13528	35.117	NaN	2535.9	30	0	285.06	0.106	+			24991	LLEFTHMY	8	59	527.2568189832224	1052.4990850332447	2	527.2566528320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LLEFTHMY_	ENSG00000141696|ENST00000393928|P3H4	35.200714571348534	0.6875396545722289	6				NaN	NaN	0	NaN	9899	3627	13522
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13529	35.119	NaN	2424.2	30	0	163.63	0.034	+			17345	IAKELELE	8	69	472.76851122473164	NaN	0	472.7682189941406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IAKELELE_	ENSG00000221944|ENST00000408957|TIGD1	68.78682469695295	1.7418937515398478	6				NaN	NaN	0	NaN	9900	3627	13522
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13547	35.155	NaN	3478	30	0	362.52	0.214	+			11511	FPDKPITQY	9	68	554.7872625225509	1107.5599721119017	2	554.7882690429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FPDKPITQY_	ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656-2|DDOST;nc|ENSG00000244038|P39656-3|DDOST;nc|ENSG00000244038|P39656|DDOST	68.84614121027924	0.14577793175421136	6				NaN	NaN	0	NaN	9915	3630	13546
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13548	35.159	NaN	3411.9	30	0	645.91	0.106	+			42784	TEAGALHVL	9	55	455.7534438433667	909.4923347535334	2	455.7535705566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEAGALHVL_	ENSG00000105639|ENST00000458235|JAK3;ENST00000526008.5_1_19:17949989-17958765:-|nuORF;ENST00000527031.5_1_19:17947866-17955268:-|nuORF;ENST00000528293.1_1_19:17953965-17958870:-|nuORF;JAK3|p.Q39Pfs*13|1|0.25|ENSG00000105639|chr19:17844302-17844303|-/G|frameshift_variant;JAK3|p.Q39Sfs*108|1|0.12|ENSG00000105639|chr19:17844303-17844303|G/-|frameshift_variant;nc|ENSG00000105639|P52333-2|JAK3;nc|ENSG00000105639|P52333-4|JAK3	76.84663266511073	0.11118375776443899	6				NaN	NaN	0	NaN	9916	3630	13546
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13549	35.161	NaN	1615.7	30	0	253.39	0.106	+			10875	FAWGALGL	8	45	417.73060103330613	NaN	0	417.730712890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FAWGALGL_	ENST00000369842.8_1_X:153609573-153609861:+|nuORF	43.626045697637714	1.7418937515398478	6				NaN	NaN	0	NaN	9917	3630	13546
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13550	35.163	NaN	1524	30	0	258.29	0.106	+			27512	MNLIKMIV	8	60	481.2818111650759	960.5490693969518	2	481.2821350097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MNLIKMIV_	ENSG00000086200|ENST00000325324|IPO11;ENST00000507640.1_1_5:61778930-61779155:+|nuORF;IPO11|p.S807Ffs*4|1|0.22|ENSG00000086200|chr5:62551288-62551289|TT/-|frameshift_variant;IPO11|p.S807Ffs*5|1|0.37|ENSG00000086200|chr5:62551287-62551288|-/T|frameshift_variant;IPO11|p.S807Lfs*22|2|0.29|ENSG00000086200|chr5:62551288-62551288|T/-|frameshift_variant;nc|ENSG00000086200|Q9UI26-2|IPO11	31.954861631926434	0.7126016770032289	6				NaN	NaN	0	NaN	9918	3630	13546
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13551	35.164	NaN	1550.2	30	0	170.13	0.106	+			44279	TSALPIIQK	9	59	485.8017746325038	969.5889963318076	2	485.80084228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TSALPIIQK_	ENSG00000147872|ENST00000276914|PLIN2;ENST00000472715.1_1_9:19126103-19127487:-|nuORF;ENST00000475923.1_1_9:19126103-19126313:-|nuORF;PLIN2|p.V348*|1|0.15|ENSG00000147872|chr9:19116520-19116520|C/-|frameshift_variant	42.396135135203025	0.392153681582562	6				NaN	NaN	0	NaN	9919	3630	13546
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13552	35.166	NaN	3650.6	30	0	472.59	0.035			+	46658	VGEATTRVF	9	64	490.26426114291337	978.5139693526268	2	490.2633972167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VGEATTRVF_	REV__ENSG00000120251|ENST00000264426|GRIA2;REV__nc|ENSG00000120251|P42262-2|GRIA2;REV__nc|ENSG00000120251|P42262-3|GRIA2;REV__nc|ENSG00000120251|P42262-4|GRIA2	65.46538089061403	0.16805504838372562	6				NaN	NaN	0	NaN	9920	3630	13546
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13553	35.167	NaN	1336.9	30	0	113.88	0.141			+	14916	GTMAILTTYM	10	60	551.2694583354216	NaN	0	551.2695922851562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GTMAILTTYM_	REV__ENSG00000086848|ENST00000616540|ALG9;REV__ENST00000530851.6_1_11:111724165-111739381:-|nuORF;REV__nc|ENSG00000086848|Q9H6U8-2|ALG9;REV__nc|ENSG00000086848|Q9H6U8-4|ALG9;REV__nc|ENSG00000086848|Q9H6U8|ALG9	20.94693142431847	0.4201028297492154	6				NaN	NaN	0	NaN	9921	3630	13546
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13571	35.206	NaN	8998.4	30	0	1502.2	0.214	+			44946	TVATAVEQY	9	71	491.248675261367	980.482797589534	2	491.2479248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVATAVEQY_	ENSG00000116209|ENST00000234831|TMEM59	167.22876102047192	0.0032399547248545047	6				NaN	NaN	0	NaN	9936	3633	13570
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13572	35.21	NaN	4405.6	30	0	483.25	0.106			+	13405	GLFLIGEKG	9	61	467.2734604813377	932.5323680294754	2	467.7726745605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GLFLIGEKG_	REV__ENST00000441363.1_1_6:74009094-74009619:+|nuORF	35.61828744233558	0.47037581924408073	6				NaN	NaN	0	NaN	9937	3633	13570
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13573	35.212	NaN	3825.1	30	0	1954.1	0.106	+			35358	SAPLGKMSL	9	58	452.252144679355	902.48973642551	2	452.2518005371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAPLGKMSL_	ENSG00000122203|ENST00000298569|KIAA1191;ENST00000506668.5_1_5:175780428-175786529:-|nuORF;KIAA1191|p.K274Qfs*18|1|0.61|ENSG00000122203|chr5:176347698-176347699|-/G|frameshift_variant	33.921630207806714	0.48623198279849766	6				NaN	NaN	0	NaN	9938	3633	13570
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13574	35.214	NaN	3867.2	30	0	906.61	0.106			+	9537	ELDQLNAL	8	57	458.2429070410753	914.4712611489506	2	458.2428283691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ELDQLNAL_	REV__ENSG00000086015|ENST00000361297|MAST2;REV__nc|ENSG00000086015|Q6P0Q8-2|MAST2	76.7741389293348	0.3504530765139327	6				NaN	NaN	0	NaN	9939	3633	13570
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13575	35.215	NaN	2176.8	30	0	199.67	0.106			+	-1	SLASMSGEIE	10	67	520.2320596073679	1038.4495662815357	2	520.232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_SLASM(Oxidation (M))SGEIE_	REV__tr|U7SFX9|U7SFX9_FUSNUTIGR00659familyproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02273PE=4SV=1	45.97224482568171	0.49411383603842696	6				NaN	NaN	0	NaN	9940	3633	13570
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13576	35.217	NaN	1199.4	30	0	324.66	0.033			+	24240	LETAAKII	8	39	429.76829505673834	857.5220371802767	2	429.7686462402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LETAAKII_	REV__ENSG00000147231|ENST00000372548|RADX;REV__nc|ENSG00000147231|Q6NSI4-3|RADX;REV__nc|ENSG00000147231|Q6NSI4-4|RADX	35.61828744233558	0.6843154725607303	6				NaN	NaN	0	NaN	9941	3633	13570
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13577	35.218	NaN	2733.7	30	0	305.36	0.139	+			18963	IVQSPSLLS	9	64	472.27633425540785	942.5381155776157	2	472.2763366699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IVQSPSLLS_	ENST00000588432.1_1_19:44438689-44439413:-|nuORF	51.33545320467046	0.2872990594074956	6				NaN	NaN	0	NaN	9942	3633	13570
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13595	35.255	NaN	59668	30	0	7409.5	0.214	+			28288	NEASVLHNL	9	105	498.75929119495646	995.5040294567129	2	498.7589111328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NEASVLHNL_	ENSG00000078814|ENST00000262873|MYH7B;ENSG00000100345|ENST00000216181|MYH9;ENSG00000105357|ENST00000642316|MYH14;ENSG00000133026|ENST00000360416|MYH10;ENSG00000133392|ENST00000300036|MYH11;MYH10|p.A411Pfs*11|1|0.15|ENSG00000133026|chr17:8546562-8546562|T/-|frameshift_variant;MYH14|p.G549Wfs*8|1|0.23|ENSG00000105357|chr19:50250519-50250520|-/C|frameshift_variant;MYH14|p.L1950Sfs*14|1|0.34|ENSG00000105357|chr19:50309646-50309646|C/-|frameshift_variant;MYH14|p.M997*|1|0.19|ENSG00000105357|chr19:50271483-50271483|A/-|frameshift_variant;MYH14|p.P548Lfs*25|2|0.32|ENSG00000105357|chr19:50250520-50250520|C/-|frameshift_variant;MYH14|p.R929Gfs*44|1|0.38|ENSG00000105357|chr19:50268237-50268237|G/-|frameshift_variant;MYH9|p.C91Y|1|0.25|ENSG00000100345|chr22:36348965-36348965|C/T|missense_variant;MYH9|p.I784*|1|0.07|ENSG00000100345|chr22:36304036-36304036|G/-|frameshift_variant;nc|ENSG00000078814|A7E2Y1-2|MYH7B;nc|ENSG00000078814|A7E2Y1|MYH7B;nc|ENSG00000105357|Q7Z406-4|MYH14;nc|ENSG00000105357|Q7Z406-5|MYH14;nc|ENSG00000105357|Q7Z406-6|MYH14;nc|ENSG00000105357|Q7Z406|MYH14;nc|ENSG00000133026|P35580-2|MYH10;nc|ENSG00000133026|P35580-3|MYH10;nc|ENSG00000133026|P35580-5|MYH10;nc|ENSG00000133026|P35580|MYH10;nc|ENSG00000133392|P35749-2|MYH11;nc|ENSG00000133392|P35749-3|MYH11;nc|ENSG00000133392|P35749-4|MYH11	167.22876102047192	0.0032399547248545047	6				NaN	NaN	0	NaN	9957	3636	13594
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13596	35.259	NaN	39942	30	0	3489.7	0.106	+			4671	ATLQYIVGR	9	94	510.7957352446896	1019.5769175561792	2	510.7958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATLQYIVGR_	ENSG00000085377|ENST00000652536|PREP;PREP|p.L670Cfs*20|1|0.16|ENSG00000085377|chr6:105278269-105278269|G/-|frameshift_variant	172.24860141594272	0.002383092361811508	6				NaN	NaN	0	NaN	9958	3636	13594
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13597	35.261	NaN	8336.7	30	0	861.01	0.106	+			2519	APVGGHILSY	10	72	507.2738163853837	1012.5330798375675	2	507.2740783691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_APVGGHILSY_	ENSG00000197879|ENST00000648651|MYO1C;nc|ENSG00000197879|O00159-2|MYO1C;nc|ENSG00000197879|O00159-3|MYO1C	82.30502934623384	0.17678907142465278	6				NaN	NaN	0	NaN	9959	3636	13594
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13598	35.263	NaN	8790.5	30	0	1348.3	0.106			+	29682	PGSAGYLLAGA	11	64	488.7586525044902	975.5027520757804	2	488.7583312988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PGSAGYLLAGA_	REV__MSX1|p.S270L|1|0.4|ENSG00000163132|chr4:4863040-4863040|C/T|missense_variant	56.72105179125745	0.35272424613657194	6				NaN	NaN	0	NaN	9960	3636	13594
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13599	35.265	NaN	5900.5	30	0	1733.6	0.106			+	10341	ETTLIGKL	8	62	437.7659366460052	873.5173203588104	2	437.76556396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ETTLIGKL_	REV__ENSG00000198146|ENST00000356321|ZNF770;REV__ZNF770|p.L495Sfs*10|1|0.15|ENSG00000198146|chr15:34981947-34981951|AATTA/-|frameshift_variant	84.9155231211612	0.2928622555056503	6				NaN	NaN	0	NaN	9961	3636	13594
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13600	35.267	NaN	4967.5	30	0	1785.4	0.034	+			392	AASEFILGK	9	66	468.263466050479	934.512379167758	2	468.2633361816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AASEFILGK_	ENSG00000138496|ENST00000682323|PARP9;nc|ENSG00000138496|Q8IXQ6-3|PARP9;nc|ENSG00000138496|Q8IXQ6|PARP9;PARP9|p.T633Pfs*5|2|0.22|ENSG00000138496|chr3:122537047-122537047|T/-|frameshift_variant	72.87924865735499	0.12833875048249987	6				NaN	NaN	0	NaN	9962	3636	13594
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13601	35.267	NaN	3847.7	30	0	598.41	0.139	+			430	AAVAAQALVL	10	63	463.7863752454315	NaN	0	463.7864990234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AAVAAQALVL_	ENSG00000181619|ENST00000395116|GPR135	63.30626980617807	0.2072786894693966	6				NaN	NaN	0	NaN	9963	3636	13594
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13619	35.306	NaN	24556	30	0	3664.5	0.214	+			10995	FEGKTLVSV	9	77	490.2763965316643	978.5382401301287	2	490.2763977050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FEGKTLVSV_	ENSG00000080824|ENST00000216281|HSP90AA1;ENST00000378770.1_1_4:190394307-190396341:+|nuORF;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000205100|Q58FG1|HSP90AA4P	85.86182877749512	0.07653218437724067	6				NaN	NaN	0	NaN	9978	3639	13618
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13620	35.31	NaN	6070.1	30	0	867.94	0.106	+			3065	ASFNDTFVH	9	65	519.2380405389374	1036.4615281446747	2	519.2381591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASFNDTFVH_	ENSG00000164587|ENST00000407193|RPS14;ENST00000519690.1_1_5:149827146-149827347:-|nuORF	110.11987700582712	0.028875675806141952	6				NaN	NaN	0	NaN	9979	3639	13618
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13621	35.312	NaN	3686.3	30	0	479.57	0.106			+	5357	ATVVEETAV	9	56	459.74257060195583	917.4705882707117	2	459.7424011230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATVVEETAV_	REV__ENSG00000104064|ENST00000380877|GABPB1;REV__nc|ENSG00000104064|Q06547-3|GABPB1;REV__nc|ENSG00000104064|Q06547-4|GABPB1;REV__nc|ENSG00000104064|Q06547|GABPB1	63.30626980617807	0.18605348971131092	6				NaN	NaN	0	NaN	9980	3639	13618
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13622	35.314	NaN	5499.7	30	0	863.13	0.106	+			41100	SVINPGAIYR	10	73	545.3063896071905	1088.5982262811808	2	545.3065795898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVINPGAIYR_	ENSG00000115232|ENST00000397033|ITGA4;ENST00000465522.5_1_2:182322141-182350724:+|nuORF;ENST00000476089.1_1_2:182321937-182323202:+|nuORF;ENST00000484404.1_1_2:182322441-182339919:+|nuORF;ITGA4|p.T615Nfs*11|1|0.22|ENSG00000115232|chr2:181509798-181509799|-/A|frameshift_variant;nc|ENSG00000115232|P13612-2|ITGA4	74.1650062923329	0.2432923583094885	6				NaN	NaN	0	NaN	9981	3639	13618
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13623	35.316	NaN	2642.2	30	0	532.87	0.106	+			13878	GRAGWAPS	8	48	401.20525652903024	800.3959601248605	2	401.204345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GRAGWAPS_	ENST00000314485.11_2_1:160068207-160068342:-|nuORF	40.5726180659479	0.6527593143185008	6				NaN	NaN	0	NaN	9982	3639	13618
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13624	35.317	NaN	2722.6	30	0	629.29	0.036	+			18291	IPNENEAQF	9	57	531.2486466237788	1060.4827403143574	2	531.2495727539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IPNENEAQF_	ENSG00000100280|ENST00000357586|AP1B1;ENST00000482818.1_1_22:29726183-29727937:-|nuORF;nc|ENSG00000100280|Q10567-2|AP1B1;nc|ENSG00000100280|Q10567-3|AP1B1;nc|ENSG00000100280|Q10567-4|AP1B1	58.22992032128504	0.22837015374068087	6				NaN	NaN	0	NaN	9983	3639	13618
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13625	35.318	NaN	2634.2	30	0	383.18	0.14	+			18490	ISGNVYILK	9	65	503.8002625455067	1005.5859721578134	2	503.800048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ISGNVYILK_	ENSG00000129534|ENST00000310806|MIS18BP1;MIS18BP1|p.K1063Nfs*18|1|0.14|ENSG00000129534|chr14:45206134-45206134|T/-|frameshift_variant;MIS18BP1|p.S991Nfs*17|1|0.35|ENSG00000129534|chr14:45217046-45217050|TGTAC/-|frameshift_variant;MIS18BP1|p.V839Sfs*20|1|0.14|ENSG00000129534|chr14:45224073-45224073|G/-|frameshift_variant	60.11826168202944	0.21262886028301267	6				NaN	NaN	0	NaN	9984	3639	13618
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13643	35.357	NaN	5078.8	30	0	876.31	0.214	+			44011	TPISEHAVF	9	65	500.7593006090545	NaN	0	500.7591247558594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TPISEHAVF_	ENSG00000133706|ENST00000394434|LARS1;nc|ENSG00000133706|Q9P2J5-2|LARS1;nc|ENSG00000133706|Q9P2J5-3|LARS1	71.29570347882199	0.10120983364817086	6				NaN	NaN	0	NaN	9999	3642	13642
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13644	35.361	NaN	3051	30	0	455.9	0.106			+	21237	KLILAMTEK	9	72	523.818206693085	NaN	0	523.8184814453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KLILAMTEK_	REV__ENSG00000071242|ENST00000265678|RPS6KA2;REV__nc|ENSG00000071242|Q15349-2|RPS6KA2;REV__nc|ENSG00000071242|Q15349-3|RPS6KA2	84.9155231211612	0.05454024040755679	6				NaN	NaN	0	NaN	10000	3642	13642
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13645	35.363	NaN	3248.4	30	0	566.15	0.106			+	8409	EAPVMKPI	8	54	442.74922793073523	883.4839029282705	2	442.7489013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EAPVMKPI_	REV__ENSG00000232125|ENST00000452335|DYTN	68.78682469695295	0.41700713582915416	6				NaN	NaN	0	NaN	10001	3642	13642
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13646	35.365	NaN	4135.5	30	0	1440.7	0.106			+	25058	LLKVIPHGGP	10	43	344.218463091731	1029.633559875393	3	344.2183837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LLKVIPHGGP_	REV__NFATC4|p.V451I|1|0.27|ENSG00000100968|chr14:24372595-24372595|G/A|missense_variant	18.262085536374414	0.7236521404371882	6				NaN	NaN	0	NaN	10002	3642	13642
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13647	35.367	NaN	4215	30	0	1363.4	0.106			+	36379	SETGKLIVC	9	63	475.25453729952574	948.4945216658515	2	475.2545166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SETGKLIVC_	REV__ENST00000541754.1_1_11:114168855-114182798:+|nuORF	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	10003	3642	13642
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13648	35.369	NaN	1048.6	30	0	285.8	0.036	+			22452	KTLESQVKY	9	46	548.3068237304688	NaN	0	548.3068237304688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KTLESQVKY_	CCDC169|p.A130Dfs*22|1|0.27|ENSG00000242715|chr13:36254070-36254070|G/-|frameshift_variant;ENSG00000242715|ENST00000239859|CCDC169;nc|ENSG00000120669|Q9NX45-3|SOHLH2;nc|ENSG00000242715|A6NNP5-3|CCDC169;nc|ENSG00000242715|A6NNP5-4|CCDC169;nc|ENSG00000242715|A6NNP5-5|CCDC169;nc|ENSG00000242715|A6NNP5-6|CCDC169	32.81241826257853	0.3119040447479903	6				NaN	NaN	0	NaN	10004	3642	13642
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13649	35.369	NaN	1911.6	30	0	109.82	0.14	+			25915	LSGPRLLFK	9	59	515.8238523625847	1029.6331517919693	2	515.8237915039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSGPRLLFK_	ENSG00000189266|ENST00000334351|PNRC2;nc|ENSG00000189266|Q9NPJ4-2|PNRC2	43.650786325866115	0.37743712540499297	6				NaN	NaN	0	NaN	10005	3642	13642
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13667	35.409	NaN	26407	30	0	6759.7	0.214	+			5554	AVALPVAVGR	10	74	476.80028921031675	NaN	0	476.80029296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVALPVAVGR_	ENSG00000275395|ENST00000616721|FCGBP;nc|ENSG00000275395|Q9Y6R7|FCGBP	99.37495909608758	0.01840911926518095	6				NaN	NaN	0	NaN	10020	3645	13666
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13668	35.412	NaN	7299.9	30	0	3089.6	0.106	+			30501	QAFGEKITM	9	67	512.7601264120987	1023.5056998909973	2	512.76025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QAFGEKITM_	ENSG00000137575|ENST00000260130|SDCBP;ENST00000424643.3_1_8:70855645-70855750:+|nuORF;ENST00000519115.5_1_8:59477592-59490768:+|nuORF;ENST00000523441.1_1_8:59490633-59492419:+|nuORF;nc|ENSG00000137575|O00560-2|SDCBP;nc|ENSG00000137575|O00560-3|SDCBP	90.60085204095205	0.06317133949006545	6				NaN	NaN	0	NaN	10021	3645	13666
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13669	35.414	NaN	4513.8	30	0	1883.8	0.106	+			28160	NAMEDAQTL	9	60	496.7214423951238	991.4283318570476	2	496.7210388183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NAMEDAQTL_	ENSG00000196975|ENST00000394295|ANXA4;nc|ENSG00000196975|P09525|ANXA4	72.2432373244024	0.13108886737667413	6				NaN	NaN	0	NaN	10022	3645	13666
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13670	35.416	NaN	4614.7	30	0	755.84	0.106	+			26527	LTQNEMIFK	9	66	562.293312588185	1122.57207224317	2	562.2946166992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LTQNEMIFK_	ENSG00000054793|ENST00000338821|ATP9A;ENSG00000166377|ENST00000426216|ATP9B;nc|ENSG00000054793|O75110-2|ATP9A;nc|ENSG00000166377|O43861-2|ATP9B	138.06239232086	0.011389075116295402	6				NaN	NaN	0	NaN	10023	3645	13666
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13671	35.418	NaN	2839.6	30	0	169.23	0.106	+			46072	VCNKISLLP	9	69	493.7887863761194	985.5630198190388	2	493.7882385253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VCNKISLLP_	ENSG00000039319|ENST00000505560|ZFYVE16;ENST00000512558.5_1_5:79729945-79747536:+|nuORF;ZFYVE16|p.T1329Hfs*11|2|0.35|ENSG00000039319|chr5:80459451-80459451|A/-|frameshift_variant	49.44154591367651	0.3095138337212152	6				NaN	NaN	0	NaN	10024	3645	13666
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13672	35.42	NaN	958.57	30	0	83.802	0.033			+	4216	ATGASTVVAP	10	45	437.2374467418191	872.4603405504382	2	437.2371520996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATGASTVVAP_	REV__ENST00000248104.11_1_16:1416187-1416277:-|nuORF	29.14955571784316	0.6417842315402807	6				NaN	NaN	0	NaN	10025	3645	13666
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13673	35.42	NaN	7271.6	30	0	1383	0.14			+	48402	VTIGGFSVTK	10	72	504.789943046107	1007.565333159014	2	504.7899169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VTIGGFSVTK_	REV__ARPP21|p.A382V|1|0.26|ENSG00000172995|chr3:35721754-35721754|C/T|missense_variant	89.02883481214508	0.13663399911061233	6				NaN	NaN	0	NaN	10026	3645	13666
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13691	35.46	NaN	16042	30	0	3416.6	0.215	+			6389	AVVELVTVK	9	72	479.30270869372157	956.5908644542432	2	479.30230712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVVELVTVK_	ENSG00000182220|ENST00000636580|ATP6AP2;nc|ENSG00000182220|O75787-2|ATP6AP2	106.68306549817024	0.032382560583716295	6				NaN	NaN	0	NaN	10041	3648	13690
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13692	35.463	NaN	20726	30	0	6986.9	0.106	+			38275	SQPLGPRII	9	84	490.7981290799802	979.5817052267604	2	490.79791259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SQPLGPRII_	ENSG00000248713|ENST00000511828|C4orf54	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	10042	3648	13690
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13693	35.466	NaN	3795.2	30	0	1223.1	0.106	+			45032	TVGAFFASK	9	61	464.2502969903016	926.4860410474032	2	464.2501220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVGAFFASK_	ENSG00000129473|ENST00000250405|BCL2L2	41.42661286455405	0.403525789677298	6				NaN	NaN	0	NaN	10043	3648	13690
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13694	35.467	NaN	2775.2	30	0	366.66	0.106	+			45775	VAGAVIGAVLA	11	53	470.7946465469225	939.574740160645	2	470.79461669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VAGAVIGAVLA_	nc|ENSG00000177707|Q9NQS3-3|NECTIN3	40.5726180659479	0.5501078856804735	6				NaN	NaN	0	NaN	10044	3648	13690
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13695	35.469	NaN	3761.8	30	0	1655	0.106			+	-1	PTSMKLNK	8	54	467.75393391882824	933.4933149044565	2	467.7532653808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_PTSM(Oxidation (M))KLNK_	REV__ENSG00000170836|ENST00000305921|PPM1D;REV__ENST00000392995.7_1_17:58734367-58740910:+|nuORF	33.51558372728122	0.7005509609380386	6				NaN	NaN	0	NaN	10045	3648	13690
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13696	35.471	NaN	3080.6	30	0	336.19	0.036			+	20710	KGRQAPTTVR	10	61	557.3289035325079	1112.6432541318156	2	557.3294067382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KGRQAPTTVR_	REV__ENSG00000162894|ENST00000367091|FCMR;REV__nc|ENSG00000162894|O60667-2|FCMR;REV__nc|ENSG00000162894|O60667-3|FCMR	82.7504851949679	0.1731497355276012	6				NaN	NaN	0	NaN	10046	3648	13690
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13697	35.472	NaN	6086.8	30	0	1499.2	0.14	+			18018	IIIAEVVNK	9	69	499.81617251911644	997.6177921050329	2	499.8156433105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IIIAEVVNK_	ENSG00000128641|ENST00000392318|MYO1B;nc|ENSG00000128641|O43795-2|MYO1B	90.36981228632155	0.0638227155548745	6				NaN	NaN	0	NaN	10047	3648	13690
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13715	35.511	NaN	28185	30	0	3421.7	0.214	+			8239	EAFKAIGTAY	10	76	535.7793351572145	1069.544117381229	2	535.7799682617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EAFKAIGTAY_	ENSG00000148719|ENST00000444643|DNAJB12;nc|ENSG00000148719|Q9NXW2-2|DNAJB12	223.87817336536054	2.005749582647105E-15	6				NaN	NaN	0	NaN	10062	3651	13714
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13716	35.514	NaN	5377.4	30	0	707.71	0.106	+			37990	SPISQKIIY	9	74	524.8055691583468	1047.5965853834934	2	524.80615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SPISQKIIY_	CFH|p.Q859Hfs*22|1|0.05|ENSG00000000971|chr1:196736986-196736987|-/TAATTGTATTT|frameshift_variant;CFH|p.T645Nfs*9|1|0.26|ENSG00000000971|chr1:196726523-196726524|-/A|frameshift_variant;ENSG00000000971|ENST00000367429|CFH;ENST00000466229.5_1_1:196648727-196709933:+|nuORF;nc|ENSG00000000971|P08603-2|CFH;nc|ENSG00000000971|P08603|CFH	52.936696900407355	0.27249468807391813	6				NaN	NaN	0	NaN	10063	3651	13714
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13717	35.517	NaN	6237.1	30	0	571.93	0.106	+			44005	TPIEGMLSH	9	78	492.7445096049781	983.4744662767562	2	492.7444763183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TPIEGMLSH_	ENSG00000170515|ENST00000303305|PA2G4;nc|ENSG00000170515|Q9UQ80-2|PA2G4;PA2G4|p.K373Efs*19|1|0.43|ENSG00000170515|chr12:56111517-56111518|-/A|frameshift_variant;PA2G4|p.T200Pfs*58|1|0.29|ENSG00000170515|chr12:56109899-56109899|A/-|frameshift_variant	125.81401957644128	0.01768009863045738	6				NaN	NaN	0	NaN	10064	3651	13714
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13718	35.518	NaN	2877.6	30	0	495.33	0.106	+			17986	IHLQPLKTQ	9	68	539.3245601439017	1076.6345673546034	2	539.3248901367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IHLQPLKTQ_	ENSG00000186812|ENST00000330501|ZNF397;ENST00000589420.1_1_18:32821016-32837899:+|nuORF;nc|ENSG00000186812|Q8NF99-2|ZNF397;nc|ENSG00000186812|Q8NF99-3|ZNF397	30.568863376406313	0.5175653706841606	6				NaN	NaN	0	NaN	10065	3651	13714
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13719	35.52	NaN	3229.2	30	0	322.82	0.106	+			11512	FPDKPITQY	9	68	554.7872625225509	1107.5599721119017	2	554.786865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FPDKPITQY_	ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656-2|DDOST;nc|ENSG00000244038|P39656-3|DDOST;nc|ENSG00000244038|P39656|DDOST	41.42661286455405	0.403525789677298	6				NaN	NaN	0	NaN	10066	3651	13714
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13720	35.522	NaN	1681.4	30	0	767.55	0.031				-1	 	0	35	357.2146193313075	712.414685729415	2	357.21453857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10067	3651	13714
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13721	35.522	NaN	3492.2	30	0	878.65	0.144	+			24445	LGEFNWLIKIG	11	55	430.5797271090189	1288.7173519272567	3	430.57965087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LGEFNWLIKIG_	ENST00000537568.1_1_12:16747235-16762728:-|nuORF	25.125986553469783	0.7262400895305658	6				NaN	NaN	0	NaN	10068	3651	13714
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13739	35.562	NaN	22007	30	0	2138.9	0.214	+			4029	ATDAVGIVLK	10	83	493.79774989823727	985.5809468632746	2	493.79736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATDAVGIVLK_	ENSG00000132676|ENST00000368336|DAP3;ENST00000462978.1_1_1:155697409-155701908:+|nuORF;nc|ENSG00000132676|P51398-2|DAP3;nc|ENSG00000132676|P51398-3|DAP3	134.7655990226056	0.012149689860786373	6				NaN	NaN	0	NaN	10083	3654	13738
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13740	35.565	NaN	9601.5	30	0	1003.7	0.106	+			553	ADFETVRM	8	70	484.7287990575707	967.4430451819414	2	484.7286071777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ADFETVRM_	ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2	143.8867514904718	0.2724165679903577	6				NaN	NaN	0	NaN	10084	3654	13738
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13741	35.568	NaN	7205	30	0	4538.1	0.106				-1	 	0	46	379.20967610867365	756.4047992841473	2	379.2093200683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10085	3654	13738
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13742	35.569	NaN	7052.3	30	0	2255.1	0.106	+			45416	TVVPSMGTKP	10	67	508.7741877439772	1015.5338225547545	2	508.77423095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TVVPSMGTKP_	ENSG00000143514|ENST00000343537|TP53BP2;nc|ENSG00000143514|Q13625-2|TP53BP2;nc|ENSG00000143514|Q13625|TP53BP2	42.86426827375447	0.522752283233888	6				NaN	NaN	0	NaN	10086	3654	13738
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13743	35.571	NaN	4371.3	30	0	1850.2	0.106			+	42946	TEISGLTPGK	10	70	501.77690739755496	NaN	0	501.7767028808594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TEISGLTPGK_	REV__ENSG00000160087|ENST00000349431|UBE2J2;REV__ENST00000464036.5_1_1:1190585-1197670:-|nuORF;REV__nc|ENSG00000160087|Q8N2K1-2|UBE2J2;REV__nc|ENSG00000160087|Q8N2K1-3|UBE2J2	52.936696900407355	0.28703625529470256	6				NaN	NaN	0	NaN	10087	3654	13738
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13744	35.573	NaN	4277.1	30	0	503.97	0.035	+			50121	WHQLPGAVN	9	66	511.26378249438085	1020.5130120555617	2	511.2637634277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_WHQLPGAVN_	ENST00000243903.5_1_20:37400706-37400778:+|nuORF	29.14955571784316	0.5308295550522326	6				NaN	NaN	0	NaN	10088	3654	13738
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13745	35.574	NaN	1132.3	30	0	138.16	0.139	+			2259	ALVHGGEL	8	44	398.2213439941406	NaN	0	398.2213439941406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ALVHGGEL_	ENSG00000261272|ENST00000561890|MUC22	44.53106598305862	1.7418937515398478	6				NaN	NaN	0	NaN	10089	3654	13738
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13763	35.613	NaN	10798	30	0	1557	0.214			+	13414	GLGELRCRPG	10	87	529.2822200679789	1056.5498872027576	2	530.291748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GLGELRCRPG_	REV__ENST00000456318.5_2_3:184079522-184080848:+|nuORF;REV__ENST00000460083.1_1_3:184080267-184080848:+|nuORF	24.519189625965996	0.6795976720565101	6				NaN	NaN	0	NaN	10104	3657	13762
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13764	35.617	NaN	8282.1	30	0	1704.2	0.106			+	50112	WGVYKALM	8	67	484.25859479058335	966.5026366479667	2	484.2581787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WGVYKALM_	REV__tr|U7SZH4|U7SZH4_FUSNUHelicaseATP-bindingdomain-containingprotein(Fragment)OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00871PE=4SV=1	46.76643321282427	0.6143254112625767	6				NaN	NaN	0	NaN	10105	3657	13762
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13765	35.619	NaN	7543	30	0	717.38	0.106	+			38715	SSLDVNVLK	9	67	487.779873420252	973.545193907304	2	487.7794189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSLDVNVLK_	ENSG00000179562|ENST00000321407|GCC1;GCC1|p.T633Afs*8|1|0.05|ENSG00000179562|chr7:127582446-127582447|-/CA|frameshift_variant	112.10723106719422	0.02684780151337622	6				NaN	NaN	0	NaN	10106	3657	13762
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13766	35.62	NaN	4698	30	0	646.14	0.106	+			34845	RYQDAIRVF	9	66	584.3173158717198	1166.6200788102394	2	584.3175048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RYQDAIRVF_	EIF3L|p.A337T|1|0.18|ENSG00000100129|chr22:37875943-37875943|G/A|missense_variant;ENSG00000100129|ENST00000652021|EIF3L;ENST00000457262.1_1_10:43062145-43062928:+|nuORF;nc|ENSG00000100129|Q9Y262-2|EIF3L	66.96192283764107	0.15557981141143568	6				NaN	NaN	0	NaN	10107	3657	13762
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13767	35.622	NaN	1930.7	30	0	217.11	0.106	+			47172	VLSYVNGL	8	53	432.74486574554516	863.4751785578903	2	432.7450866699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VLSYVNGL_	ENSG00000181392|ENST00000324444|SYNE4;ENST00000465425.1_1_19:36494241-36496384:-|nuORF;nc|ENSG00000181392|Q8N205-2|SYNE4	57.81127852772723	0.5234495074909924	6				NaN	NaN	0	NaN	10108	3657	13762
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13768	35.624	NaN	2413.3	30	0	357.94	0.035	+			25478	LPSAATLRY	9	67	496.2819513104854	990.5493496877708	2	496.28240966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LPSAATLRY_	ENSG00000167608|ENST00000619895|TMC4;nc|ENSG00000167608|Q7Z404-1|TMC4;nc|ENSG00000167608|Q7Z404|TMC4;TMC4|p.F240Lfs*221|1|0.42|ENSG00000167608|chr19:54168267-54168268|AA/-|frameshift_variant;TMC4|p.Q383Rfs*6|1|0.37|ENSG00000167608|chr19:54163872-54163872|G/-|frameshift_variant	52.936696900407355	0.27249468807391813	6				NaN	NaN	0	NaN	10109	3657	13762
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13769	35.625	NaN	2142.4	30	0	306.72	0.139			+	25815	LSDAPVNSI	9	51	458.2424051238812	914.4702573145624	2	458.2423400878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSDAPVNSI_	REV__BAZ1B|p.A1298Cfs*10|1|0.16|ENSG00000009954|chr7:73444083-73444084|-/G|frameshift_variant;REV__BAZ1B|p.E800Kfs*16|1|0.08|ENSG00000009954|chr7:73477067-73477067|C/-|frameshift_variant;REV__ENSG00000009954|ENST00000339594|BAZ1B;REV__nc|ENSG00000009954|Q9UIG0-2|BAZ1B	71.87747018426188	0.13267044672804276	6				NaN	NaN	0	NaN	10110	3657	13762
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13787	35.664	NaN	34189	30	0	6710.9	0.214	+			3844	ATALEYVYK	9	81	529.2822200679789	1056.5498872027576	2	529.2822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATALEYVYK_	ENSG00000135441|ENST00000548925|BLOC1S1;ENST00000549147.1_1_12:56113198-56113390:+|nuORF;nc|ENSG00000135441|P78537-2|BLOC1S1	145.15565482312357	0.00806134135205793	6				NaN	NaN	0	NaN	10125	3660	13786
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13788	35.668	NaN	12527	30	0	2358.4	0.106	+			50647	YEDLKAEL	8	76	490.749871093324	NaN	0	490.75	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YEDLKAEL_	ENSG00000127831|ENST00000248444|VIL1	82.7504851949679	1.7418937515398478	6				NaN	NaN	0	NaN	10126	3660	13786
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13789	35.67	NaN	8344.5	30	0	1737	0.106			+	27302	MGSHTIFAEF	10	53	380.51026409893626	1138.5089628970088	3	380.1759338378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MGSHTIFAEF_	REV__ENSG00000144426|ENST00000683969|NBEAL1;REV__NBEAL1|p.A1274Qfs*17|1|0.1|ENSG00000144426|chr2:203135766-203135766|A/-|frameshift_variant;REV__NBEAL1|p.D657Vfs*8|1|0.05|ENSG00000144426|chr2:203110256-203110257|-/TAAAAAA|frameshift_variant;REV__NBEAL1|p.F1670Lfs*25|1|0.21|ENSG00000144426|chr2:203144843-203144843|T/-|frameshift_variant;REV__NBEAL1|p.F2315Lfs*2|1|0.17|ENSG00000144426|chr2:203193900-203193900|T/-|frameshift_variant;REV__NBEAL1|p.K2562Rfs*15|1|0.41|ENSG00000144426|chr2:203209306-203209306|A/-|frameshift_variant;REV__NBEAL1|p.N2072Kfs*10|1|0.35|ENSG00000144426|chr2:203172825-203172826|-/A|frameshift_variant;REV__NBEAL1|p.T1311Nfs*3|1|0.08|ENSG00000144426|chr2:203135875-203135876|-/A|frameshift_variant;REV__nc|ENSG00000144426|Q6ZS30-1|NBEAL1;REV__nc|ENSG00000144426|Q6ZS30|NBEAL1	29.170058357718403	0.6416167986984785	6				NaN	NaN	0	NaN	10127	3660	13786
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13790	35.672	NaN	4508.7	30	0	390.73	0.106			+	11274	FITLGQTQY	9	71	535.7793351572145	1069.544117381229	2	536.2796630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FITLGQTQY_	REV__ENST00000590084.5_1_17:40720673-40720796:+|nuORF	74.25504064058377	0.12238981753128622	6				NaN	NaN	0	NaN	10128	3660	13786
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13791	35.673	NaN	4284.5	30	0	371.16	0.106				-1	PTLESACLSF	10	67	562.7678457134367	1123.5211384936733	2	562.7685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_PTLESAC(Carbamidomethyl (C))LSF_	TMPRSS15|p.P420S|1|0.07|ENSG00000154646|chr21:18343974-18343974|G/A|missense_variant	96.19043198914106	0.09563241103653833	6				NaN	NaN	0	NaN	10129	3660	13786
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13792	35.675	NaN	3466.2	30	0	879.84	0.035	+			25550	LPVRLWCL	8	68	500.2946310885214	998.5747092438428	2	500.795654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LPVRLWCL_	ENST00000246554.7_1_19:36139219-36139264:+|nuORF	39.021493756699265	0.6623843612266921	6				NaN	NaN	0	NaN	10130	3660	13786
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13793	35.676	NaN	3232.4	30	0	436.96	0.139	+			17801	IEVEHILN	8	62	483.7658073646676	NaN	0	483.76580810546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IEVEHILN_	RNF103|p.F203Lfs*4|2|0.25|ENSG00000239305|chr2:86605292-86605292|A/-|frameshift_variant	60.97194046774394	1.7418937515398478	6				NaN	NaN	0	NaN	10131	3660	13786
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13811	35.714	NaN	5014.1	30	0	879.16	0.214			+	-1	EVLATCLLV	9	66	509.28555619601707	1016.5565594588342	2	509.2853698730469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_EVLATC(Carbamidomethyl (C))LLV_	REV__ENSG00000138031|ENST00000679454|ADCY3;REV__nc|ENSG00000138031|O60266-2|ADCY3	55.50420428727701	0.2510918378945873	6				NaN	NaN	0	NaN	10146	3663	13810
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13812	35.718	NaN	10880	30	0	1930.1	0.106	+			45282	TVQVYIITK	9	73	532.8212555012532	1063.6279580693063	2	532.8214111328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVQVYIITK_	ENSG00000114388|ENST00000232501|NPRL2;ENST00000479512.5_1_3:50387244-50387426:-|nuORF;ENST00000487632.5_1_3:50386870-50387426:-|nuORF	97.59673978297657	0.04344766104981724	6				NaN	NaN	0	NaN	10147	3663	13810
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13813	35.72	NaN	1400	30	0	96.946	0.106			+	-1	MLKHMPFK	8	64	524.277238028812	1046.539923124424	2	524.2770385742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_MLKHM(Oxidation (M))PFK_	REV__ENST00000496384.6_2_7:140426023-140426218:-|nuORF	35.200714571348534	0.6875396545722289	6				NaN	NaN	0	NaN	10148	3663	13810
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13814	35.721	NaN	3098	30	0	442.62	0.106			+	27332	MICGQFFE	8	66	516.2208207387105	1030.4270885442209	2	515.722900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_MIC(Carbamidomethyl (C))GQFFE_	REV__ENSG00000138182|ENST00000371728|KIF20B;REV__KIF20B|p.F444Lfs*9|1|0.09|ENSG00000138182|chr10:89718764-89718764|T/-|frameshift_variant;REV__KIF20B|p.K592Rfs*4|1|0.37|ENSG00000138182|chr10:89724010-89724010|A/-|frameshift_variant;REV__KIF20B|p.N1214Tfs*5|1|0.15|ENSG00000138182|chr10:89738478-89738478|A/-|frameshift_variant;REV__KIF20B|p.N445*|1|0.1|ENSG00000138182|chr10:89718763-89718764|-/T|frameshift_variant;REV__KIF20B|p.R1552Gfs*9|1|0.39|ENSG00000138182|chr10:89758852-89758852|A/-|frameshift_variant;REV__nc|ENSG00000138182|Q96Q89-2|KIF20B;REV__nc|ENSG00000138182|Q96Q89-3|KIF20B;REV__nc|ENSG00000138182|Q96Q89-4|KIF20B	47.91560031466742	0.6071945918984287	6				NaN	NaN	0	NaN	10149	3663	13810
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13815	35.723	NaN	1747.4	30	0	101.23	0.106	+			20444	KEVDLIPKV	9	62	520.8220212163669	NaN	0	520.821533203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEVDLIPKV_	ENSG00000099290|ENST00000282633|WASHC2A;ENSG00000172661|ENST00000623400|WASHC2C;ENST00000492914.1_1_10:51829372-51845265:+|nuORF;nc|ENSG00000099290|Q641Q2-2|WASHC2A;nc|ENSG00000172661|Q9Y4E1-1|WASHC2C;nc|ENSG00000172661|Q9Y4E1-2|WASHC2C;nc|ENSG00000172661|Q9Y4E1-3|WASHC2C;nc|ENSG00000172661|Q9Y4E1-4|WASHC2C;nc|ENSG00000172661|Q9Y4E1-5|WASHC2C;nc|ENSG00000172661|Q9Y4E1-6|WASHC2C	75.04331003522576	0.0883683072398826	6				NaN	NaN	0	NaN	10150	3663	13810
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13816	35.725	NaN	1993.2	30	0	595.72	0.036			+	6778	CFELIREPA	9	59	539.2717350623844	1076.5289171915688	2	539.7705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_CFELIREPA_	REV__ATP1A4|p.E557Nfs*4|1|0.1|ENSG00000132681|chr1:160171424-160171424|G/-|frameshift_variant;REV__ATP1A4|p.P701Lfs*20|1|0.3|ENSG00000132681|chr1:160174218-160174218|C/-|frameshift_variant;REV__ENSG00000132681|ENST00000368081|ATP1A4	27.882242232435846	0.5426732730940306	6				NaN	NaN	0	NaN	10151	3663	13810
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13817	35.726	NaN	1325.9	30	0	97.91	0.14	+			11049	FENATQAL	8	45	447.2219543457031	NaN	0	447.2219543457031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FENATQAL_	ENSG00000108679|ENST00000262776|LGALS3BP	62.107414245175825	1.7418937515398478	6				NaN	NaN	0	NaN	10152	3663	13810
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13835	35.761	NaN	20769	30	0	5215.2	0.214	+			15501	GVAPFTIAR	9	77	466.27168524172356	930.5288175502471	2	466.2713623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVAPFTIAR_	COL6A3|p.A2956Lfs*45|1|0.33|ENSG00000163359|chr2:237336234-237336234|C/-|frameshift_variant;COL6A3|p.A2957Lfs*44|1|0.33|ENSG00000163359|chr2:237336232-237336232|A/-|frameshift_variant;COL6A3|p.G1770Vfs*12|1|0.05|ENSG00000163359|chr2:237366878-237366879|-/TGGTGTAA|frameshift_variant;COL6A3|p.G2207Efs*35|1|0.22|ENSG00000163359|chr2:237354908-237354908|G/-|frameshift_variant;COL6A3|p.G3016Vfs*19|1|0.34|ENSG00000163359|chr2:237334810-237334810|G/-|frameshift_variant;COL6A3|p.P2319Qfs*12|1|0.06|ENSG00000163359|chr2:237348359-237348359|G/-|frameshift_variant;COL6A3|p.V1771Sfs*8|3|0.08|ENSG00000163359|chr2:237366876-237366876|C/-|frameshift_variant;ENSG00000163359|ENST00000295550|COL6A3;nc|ENSG00000163359|P12111-2|COL6A3;nc|ENSG00000163359|P12111-3|COL6A3;nc|ENSG00000163359|P12111-4|COL6A3;nc|ENSG00000163359|P12111-5|COL6A3	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	10167	3666	13834
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13836	35.765	NaN	6618	30	0	2553.5	0.106			+	-1	EHEQYKRMLSI	11	64	483.91071923671404	NaN	0	483.91082763671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_EHEQYKRM(Oxidation (M))LSI_	REV__ENSG00000127947|ENST00000248594|PTPN12;REV__ENST00000494248.1_1_7:77214868-77230160:+|nuORF;REV__nc|ENSG00000127947|Q05209-2|PTPN12;REV__nc|ENSG00000127947|Q05209-3|PTPN12;REV__PTPN12-RSBN1L|1|fusion;REV__PTPN12-RSBN1L|2|fusion;REV__PTPN12-RSBN1L|3|fusion;REV__PTPN12-RSBN1L|4|fusion;REV__PTPN12-RSBN1L|5|fusion;REV__PTPN12-RSBN1L|6|fusion;REV__PTPN12|p.K712Sfs*5|2|0.2|ENSG00000127947|chr7:77635836-77635836|A/-|frameshift_variant;REV__PTPN12|p.R407Kfs*23|1|0.07|ENSG00000127947|chr7:77626898-77626899|-/AGGCAACT|frameshift_variant	25.125986553469783	0.45344013546260314	6				NaN	NaN	0	NaN	10168	3666	13834
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13837	35.767	NaN	1562.1	30	0	291.04	0.106	+			45048	TVGKFIQY	8	55	478.2673185132271	954.5200840932542	2	478.2662048339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVGKFIQY_	ENSG00000119927|ENST00000348367|GPAM	29.14955571784316	0.7342621283720113	6				NaN	NaN	0	NaN	10169	3666	13834
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13838	35.769	NaN	3304.2	30	0	429.41	0.106			+	19445	KAQYGTRIGS	10	65	540.7922840896418	1079.5700152460836	2	540.7918701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KAQYGTRIGS_	REV__ENSG00000169710|ENST00000306749|FASN	51.52775601994872	0.4429225830406686	6				NaN	NaN	0	NaN	10170	3666	13834
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13839	35.77	NaN	1546.6	30	0	130.44	0.106				-1	DAGGCGLPSL	10	54	473.71876194319975	945.4229709531995	2	473.7186584472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_DAGGC(Carbamidomethyl (C))GLPSL_	ENST00000308064.6_1_11:45672204-45674138:-|nuORF	37.81151784470057	0.569310847604193	6				NaN	NaN	0	NaN	10171	3666	13834
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13840	35.772	NaN	1555.9	30	0	161.91	0.106			+	50856	YEVLVDHPL	9	60	542.7884474912173	1083.5623420492345	2	542.7888793945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YEVLVDHPL_	REV__ENSG00000007001|ENST00000005756|UPP2;REV__nc|ENSG00000007001|O95045-2|UPP2	37.81151784470057	0.4459294069877048	6				NaN	NaN	0	NaN	10172	3666	13834
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13841	35.774	NaN	2723.5	30	0	435.7	0.036	+			21600	KPKKVPGEKP	10	74	554.3479494262793	1106.6813459193586	2	554.3483276367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KPKKVPGEKP_	ENSG00000114841|ENST00000420323|DNAH1;ENST00000486752.5_1_3:52350520-52422757:+|nuORF;nc|ENSG00000114841|Q9P2D7-6|DNAH1;nc|ENSG00000114841|Q9P2D7-8|DNAH1	40.77816245573522	0.5419747034533848	6				NaN	NaN	0	NaN	10173	3666	13834
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13859	35.81	NaN	4629.3	30	0	477.56	0.214	+			42990	TEKIISAEL	9	71	502.285423909783	NaN	0	502.2870788574219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEKIISAEL_	ENSG00000073614|ENST00000399788|KDM5A;nc|ENSG00000073614|P29375-2|KDM5A	104.01359247289065	0.015103351932921906	6				NaN	NaN	0	NaN	10188	3669	13858
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13860	35.814	NaN	4205.4	30	0	482.47	0.106	+			45554	TYLEKAVEV	9	66	526.287013810745	1050.5594746882898	2	526.2874145507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TYLEKAVEV_	ATM|p.G2425Vfs*15|1|0.33|ENSG00000149311|chr11:108329204-108329204|G/-|frameshift_variant;ATM|p.K2413Tfs*11|1|0.06|ENSG00000149311|chr11:108329168-108329169|-/CAACCAATTTAAATTAT|frameshift_variant;ATM|p.K2811Sfs*46|1|0.34|ENSG00000149311|chr11:108345750-108345750|A/-|frameshift_variant;ENSG00000149311|ENST00000675843|ATM;ENST00000524792.5_1_11:108158320-108236232:+|nuORF;ENST00000527389.2_1_11:108198407-108199966:+|nuORF	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	10189	3669	13858
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13861	35.816	NaN	2749.3	30	0	477.48	0.106			+	9655	ELSKPHDSL	9	63	513.2667119196876	1024.5188709061752	2	513.266845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ELSKPHDSL_	REV__GAD1|p.E163K|1|0.22|ENSG00000128683|chr2:170831132-170831132|G/A|missense_variant	47.657333605630114	0.33044192980041115	6				NaN	NaN	0	NaN	10190	3669	13858
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13862	35.818	NaN	3607.6	30	0	320.79	0.106	+			34204	RTDNISFMLK	10	72	612.8236582323142	1223.6327635314283	2	612.8237915039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RTDNISFMLK_	ENSG00000162434|ENST00000342505|JAK1;JAK1|p.K860Nfs*16|3|0.29|ENSG00000162434|chr1:64841314-64841314|T/-|frameshift_variant	144.76815839617436	0.009482796195788205	6				NaN	NaN	0	NaN	10191	3669	13858
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13863	35.82	NaN	5160.8	30	0	1589.3	0.106	+			24949	LLAGGAILAL	10	56	456.29973321901963	910.5849135048393	2	456.299560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LLAGGAILAL_	ENSG00000149452|ENST00000336232|SLC22A8;nc|ENSG00000149452|Q8TCC7-2|SLC22A8;nc|ENSG00000149452|Q8TCC7-3|SLC22A8;nc|ENSG00000149452|Q8TCC7-4|SLC22A8;nc|ENSG00000149452|Q8TCC7-5|SLC22A8	77.94384346573518	0.21241958424364343	6				NaN	NaN	0	NaN	10192	3669	13858
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13864	35.821	NaN	3941.1	30	0	519.86	0.106	+			2438	APGPHALL	8	52	388.22701163758086	774.4394703419617	2	388.2263488769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_APGPHALL_	ENSG00000213203|ENST00000307194|GIMAP1	43.626045697637714	0.6338121648150432	6				NaN	NaN	0	NaN	10193	3669	13858
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13865	35.823	NaN	3313	30	0	541.09	0.035	+			21495	KNLCHPCLS	9	63	507.74437776481113	1013.4742025964223	2	507.7447204589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KNLCHPCLS_	ENST00000441493.6_1_22:18271402-18271729:-|nuORF	37.15910966729921	0.4535818937225704	6				NaN	NaN	0	NaN	10194	3669	13858
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13883	35.859	NaN	7387.8	30	0	867.58	0.215	+			34951	SAAKLLTEY	9	69	498.27407570052367	994.5335984678474	2	498.2740173339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAAKLLTEY_	ENSG00000189221|ENST00000338702|MAOA;MAOA|p.G405Afs*12|1|0.26|ENSG00000189221|chrX:43741995-43741995|G/-|frameshift_variant	99.01295224348159	0.040209060045561164	6				NaN	NaN	0	NaN	10209	3672	13882
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13884	35.862	NaN	11560	30	0	1367.3	0.106	+			41551	SVQDVIYVR	9	75	539.798447142611	1077.582341352022	2	539.7986450195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVQDVIYVR_	ENSG00000099282|ENST00000373290|TSPAN15	120.30596017624542	0.02101454110788768	6				NaN	NaN	0	NaN	10210	3672	13882
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13885	35.864	NaN	8089.3	30	0	840.04	0.106			+	25169	LLVQPTGTNI	10	69	528.3085682625518	1054.6025835919036	2	528.3088989257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LLVQPTGTNI_	REV__COL6A6|p.V1108F|1|0.34|ENSG00000206384|chr3:130574300-130574300|G/T|missense_variant;REV__ENSG00000206384|ENST00000358511|COL6A6;REV__nc|ENSG00000206384|A6NMZ7-2|COL6A6	69.6276240434122	0.2803623802747859	6				NaN	NaN	0	NaN	10211	3672	13882
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13886	35.866	NaN	3179.3	30	0	254.21	0.106	+			44099	TPVFGKGVAY	10	69	519.7851739002917	1037.5557948673834	2	519.7847900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TPVFGKGVAY_	CYP51A1|p.L333Wfs*13|1|0.15|ENSG00000001630|chr7:92123208-92123208|A/-|frameshift_variant;ENSG00000001630|ENST00000003100|CYP51A1;ENST00000419457.1_1_13:29297642-29297861:-|nuORF;nc|ENSG00000001630|Q16850-2|CYP51A1	79.48907831485694	0.19979514868675113	6				NaN	NaN	0	NaN	10212	3672	13882
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13887	35.868	NaN	8532.1	30	0	1822.7	0.106	+			11235	FIIDSSRSV	9	70	512.2766216209575	1022.538690308715	2	512.2767944335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FIIDSSRSV_	ENSG00000132031|ENST00000407540|MATN3;ENSG00000132561|ENST00000254898|MATN2;MATN3|p.T387Hfs*10|2|0.28|ENSG00000132031|chr2:20000450-20000450|T/-|frameshift_variant;nc|ENSG00000132031|O15232-2|MATN3;nc|ENSG00000132561|O00339-2|MATN2;nc|ENSG00000132561|O00339-3|MATN2	76.16968421966216	0.11411088698345859	6				NaN	NaN	0	NaN	10213	3672	13882
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13888	35.87	NaN	2225.2	30	0	244.9	0.106	+			28705	NNGQVYSLL	9	60	504.2617653924129	1006.5089778516258	2	504.2611389160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NNGQVYSLL_	ENSG00000129038|ENST00000261921|LOXL1	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	10214	3672	13882
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13889	35.872	NaN	2529.7	30	0	422.81	0.037	+			30862	QEIESVSTQM	10	58	576.2664423880688	1150.5183318429374	2	576.26708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QEIESVSTQM_	ENSG00000146842|ENST00000397622|TMEM209;nc|ENSG00000146842|Q96SK2-2|TMEM209;nc|ENSG00000146842|Q96SK2-3|TMEM209	61.691277971877994	0.35045824941635534	6				NaN	NaN	0	NaN	10215	3672	13882
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13907	35.908	NaN	8680.3	30	0	1799	0.214	+			7379	DDSLGQSFY	9	69	516.2208207387105	1030.4270885442209	2	516.219970703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DDSLGQSFY_	ENSG00000143376|ENST00000458013|SNX27;ENST00000368841.6_1_1:151584666-151666074:+|nuORF;nc|ENSG00000143376|Q96L92-2|SNX27;nc|ENSG00000143376|Q96L92-3|SNX27	66.42927471994793	0.16001998865088202	6				NaN	NaN	0	NaN	10230	3675	13906
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13908	35.912	NaN	12354	30	0	3553.6	0.106			+	24827	LISTTIIIQ	9	75	501.3159365575016	1000.6173201818032	2	501.31573486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LISTTIIIQ_	REV__ENST00000547963.1_1_12:114182810-114183011:-|nuORF	60.11826168202944	0.21262886028301267	6				NaN	NaN	0	NaN	10231	3675	13906
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13909	35.914	NaN	2742.2	30	0	278.13	0.106				-1	 	0	53	394.7490376576228	787.4835223820456	2	394.74853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10232	3675	13906
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13910	35.916	NaN	3366.8	30	0	302.31	0.106	+			36242	SEMKLVQM	8	55	483.2434023171562	964.4722517011124	2	483.24359130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SEMKLVQM_	ENSG00000008838|ENST00000394128|MED24;MED24|p.E720Gfs*14|1|0.41|ENSG00000008838|chr17:40023224-40023225|-/A|frameshift_variant;MED24|p.K704Sfs*8|1|0.18|ENSG00000008838|chr17:40023272-40023272|G/-|frameshift_variant;MED24|p.P805Rfs*53|1|0.29|ENSG00000008838|chr17:40022663-40022663|G/-|frameshift_variant;nc|ENSG00000008838|O75448-2|MED24;THRA-MED24|1|fusion	99.37495909608758	0.2510236104623939	6				NaN	NaN	0	NaN	10233	3675	13906
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13911	35.917	NaN	1710.4	30	0	411.13	0.106	+			25346	LPEFTKSEY	9	69	557.2765371368811	1112.538521340562	2	557.276611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LPEFTKSEY_	ENSG00000114796|ENST00000242810|KLHL24;nc|ENSG00000114796|Q6TFL4-2|KLHL24	72.87924865735499	0.12833875048249987	6				NaN	NaN	0	NaN	10234	3675	13906
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13912	35.919	NaN	3073.4	30	0	368.89	0.106	+			666	AEAIIHGL	8	49	412.23745156830523	822.4603502034105	2	412.237060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEAIIHGL_	ENSG00000147601|ENST00000276603|TERF1;ENST00000583350.1_1_18:14377547-14378720:-|nuORF;nc|ENSG00000147601|P54274-2|TERF1	62.97842346883844	0.4722955155785405	6				NaN	NaN	0	NaN	10235	3675	13906
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13913	35.921	NaN	1169.3	30	0	214.85	0.036				-1	DLCLRDVPP	9	48	542.7739982722811	1083.5334436113621	2	542.7742309570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_DLC(Carbamidomethyl (C))LRDVPP_	ENSG00000117640|ENST00000374303|MTFR1L;ENST00000497956.1_1_1:26152795-26152903:+|nuORF;ENST00000531361.1_1_1:26149550-26156105:+|nuORF;nc|ENSG00000117640|Q9H019-2|MTFR1L;nc|ENSG00000117640|Q9H019-3|MTFR1L	26.69291269510374	0.5537881896960711	6				NaN	NaN	0	NaN	10236	3675	13906
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13931	35.958	NaN	4136.6	30	0	490.46	0.214	+			45184	TVMNIAEHY	9	68	539.2553553115725	1076.496157689945	2	539.2554931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVMNIAEHY_	ENSG00000106263|ENST00000360876|EIF3B;ENST00000475415.5_1_7:2414943-2418434:+|nuORF;nc|ENSG00000106263|P55884-2|EIF3B	79.71258880314673	0.09879134589249085	6				NaN	NaN	0	NaN	10251	3678	13930
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13932	35.962	NaN	3438.3	30	0	399.05	0.106	+			46121	VDISAPKI	8	55	421.7526882656423	841.4908235980846	2	421.7525939941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VDISAPKI_	AHNAK|p.K2311Rfs*11|1|0.33|ENSG00000124942|chr11:62527487-62527487|G/-|frameshift_variant;AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;AHNAK|p.L2124Ifs*37|1|0.04|ENSG00000124942|chr11:62528048-62528049|-/ATGCCTGATA|frameshift_variant;AHNAK|p.S1888Qfs*8|1|0.11|ENSG00000124942|chr11:62528755-62528756|-/G|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK	79.71258880314673	0.32596852995588826	6				NaN	NaN	0	NaN	10252	3678	13930
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13933	35.964	NaN	2913.6	30	0	426.62	0.106			+	2237	ALSSPVVIY	9	64	474.77359291318214	947.5326328931643	2	474.7734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ALSSPVVIY_	REV__ENSG00000166912|ENST00000435680|MTMR10;REV__ENST00000565728.5_1_15:31239263-31253097:-|nuORF;REV__ENST00000567567.5_1_15:31233675-31258111:-|nuORF;REV__ENST00000568547.5_1_15:31233444-31253097:-|nuORF;REV__ENST00000568604.5_1_15:31235080-31253097:-|nuORF;REV__MTMR10|p.F552Sfs*19|1|0.26|ENSG00000166912|chr15:30942966-30942966|A/-|frameshift_variant;REV__MTMR10|p.L761*|1|0.4|ENSG00000166912|chr15:30941522-30941522|A/-|frameshift_variant;REV__MTMR10|p.S561*|1|0.05|ENSG00000166912|chr15:30942941-30942942|-/AT|frameshift_variant;REV__nc|ENSG00000166912|Q9NXD2-2|MTMR10	52.29916861842294	0.2778091507991977	6				NaN	NaN	0	NaN	10253	3678	13930
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13934	35.965	NaN	2679.5	30	0	540.36	0.106			+	41254	SVLGVGALL	9	52	414.76322676670895	827.5119006002179	2	414.7632751464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVLGVGALL_	REV__ENST00000519655.6_1_8:90769440-90769893:-|nuORF	50.0245360154114	0.3026755932229825	6				NaN	NaN	0	NaN	10254	3678	13930
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13935	35.967	NaN	1704.3	30	0	125	0.106			+	16114	HDNWILVLL	9	60	561.8185223390083	NaN	0	561.8184204101562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HDNWILVLL_	REV__ENSG00000183251|ENST00000380224|OR51B4	30.317721548370564	0.32449924987115025	6				NaN	NaN	0	NaN	10255	3678	13930
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13936	35.969	NaN	3754.4	30	0	463.4	0.034	+			25330	LPDKTIASL	9	63	479.28459713727887	956.5546413413578	2	479.2834777832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LPDKTIASL_	ENSG00000117625|ENST00000419091|RCOR3;nc|ENSG00000117625|Q9P2K3-2|RCOR3;nc|ENSG00000117625|Q9P2K3-4|RCOR3;nc|ENSG00000117625|Q9P2K3|RCOR3;RCOR3|p.T133Lfs*7|1|0.26|ENSG00000117625|chr1:211278165-211278165|A/-|frameshift_variant	51.19269402634007	0.2889735674168909	6				NaN	NaN	0	NaN	10256	3678	13930
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13954	36.007	NaN	22280	30	0	12134	0.214	+			32547	QVTDFGFAK	9	71	506.7584950365073	1011.5024371398147	2	506.75848388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QVTDFGFAK_	ENSG00000072062|ENST00000308677|PRKACA;ENSG00000142875|ENST00000370685|PRKACB;ENSG00000165059|ENST00000377276|PRKACG;ENST00000536649.5_1_19:14208073-14223129:-|nuORF;ENST00000587533.1_1_19:14208360-14208546:-|nuORF;nc|ENSG00000072062|P17612-2|PRKACA;nc|ENSG00000142875|P22694-10|PRKACB;nc|ENSG00000142875|P22694-3|PRKACB;nc|ENSG00000142875|P22694-4|PRKACB;nc|ENSG00000142875|P22694-5|PRKACB;nc|ENSG00000142875|P22694-6|PRKACB;nc|ENSG00000142875|P22694-7|PRKACB;nc|ENSG00000142875|P22694-8|PRKACB;nc|ENSG00000142875|P22694-9|PRKACB;nc|ENSG00000142875|P22694|PRKACB	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	10271	3681	13953
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13955	36.01	NaN	4805.6	30	0	1319.8	0.106	+			15740	GVSAATFLK	9	53	447.25820101485385	892.5018490965077	2	447.2579345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GVSAATFLK_	ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;nc|ENSG00000184110|Q99613-2|EIF3C	101.25262130126117	0.03792372629710479	6				NaN	NaN	0	NaN	10272	3681	13953
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13956	36.012	NaN	3342.9	30	0	205.27	0.106	+			47400	VPLQRVDVM	9	71	528.7980172164383	1055.5814814996766	2	528.798095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VPLQRVDVM_	ENSG00000010327|ENST00000321725|STAB1;ENST00000481607.1_1_3:52529402-52542549:+|nuORF;nc|ENSG00000010327|Q9NY15-2|STAB1;STAB1|p.E1712Rfs*8|1|0.12|ENSG00000010327|chr3:52519356-52519357|-/C|frameshift_variant;STAB1|p.F2001Lfs*111|1|0.35|ENSG00000010327|chr3:52521452-52521452|T/-|frameshift_variant;STAB1|p.G1507Afs*84|1|0.26|ENSG00000010327|chr3:52517346-52517346|G/-|frameshift_variant;STAB1|p.L1057Sfs*33|1|0.28|ENSG00000010327|chr3:52513135-52513136|-/T|frameshift_variant;STAB1|p.P978Lfs*57|1|0.35|ENSG00000010327|chr3:52512385-52512385|C/-|frameshift_variant;STAB1|p.R1122Pfs*37|1|0.37|ENSG00000010327|chr3:52513891-52513892|-/C|frameshift_variant;STAB1|p.V800Cfs*113|1|0.34|ENSG00000010327|chr3:52509914-52509914|G/-|frameshift_variant	60.11826168202944	0.21262886028301267	6				NaN	NaN	0	NaN	10273	3681	13953
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13957	36.014	NaN	2042.9	30	0	314.33	0.106			+	24140	LELAIYLDN	9	69	532.2889391830191	1062.5633254328382	2	532.2893676757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LELAIYLDN_	REV__tr|U7T2Z3|U7T2Z3_FUSNUHTHdeoR-typedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00513PE=4SV=1	58.78195531508484	0.22376836668196862	6				NaN	NaN	0	NaN	10274	3681	13953
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13958	36.016	NaN	1967.3	30	0	170.72	0.106				-1	 	0	47	392.71558410961177	NaN	0	392.7156982421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10275	3681	13953
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13959	36.018	NaN	3742.3	30	0	446.7	0.036	+			28863	NPWDNKAVY	9	60	553.7667364312784	1105.5189199293568	2	553.7666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NPWDNKAVY_	ENSG00000162298|ENST00000377190|SYVN1;ENST00000449943.5_1_11:64897669-64899838:-|nuORF;ENST00000529207.5_1_11:64898917-64899817:-|nuORF;nc|ENSG00000162298|Q86TM6-2|SYVN1;nc|ENSG00000162298|Q86TM6-3|SYVN1;SYVN1|p.N368Qfs*129|1|0.33|ENSG00000162298|chr11:65130663-65130664|-/G|frameshift_variant;SYVN1|p.N368Tfs*117|1|0.4|ENSG00000162298|chr11:65130664-65130664|G/-|frameshift_variant	65.46538089061403	0.16805504838372562	6				NaN	NaN	0	NaN	10276	3681	13953
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13960	36.018	NaN	1322.8	30	0	234.38	0.141				-1	LQQLACECY	9	58	564.2446419101323	1126.4747308870644	2	564.2449340820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_LQQLAC(Carbamidomethyl (C))ECY_	ENSG00000141456|ENST00000572293|PELP1	29.14955571784316	0.5308295550522326	6				NaN	NaN	0	NaN	10277	3681	13953
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13978	36.058	NaN	9249.6	30	0	1489.1	0.214	+			27684	MPVAQQPVY	9	70	516.7626143193089	1031.5106757054177	2	516.7623291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MPVAQQPVY_	ENSG00000164120|ENST00000296522|HPGD;ENST00000511499.5_1_4:175413109-175416797:-|nuORF;ENST00000512410.1_1_4:175416602-175443578:-|nuORF;nc|ENSG00000164120|P15428-2|HPGD;nc|ENSG00000164120|P15428-3|HPGD;nc|ENSG00000164120|P15428-5|HPGD	57.81127852772723	0.2318599694398087	6				NaN	NaN	0	NaN	10292	3684	13977
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13979	36.061	NaN	4674.7	30	0	598.94	0.106			+	25159	LLTEKEGLV	9	73	501.297371926953	1000.5801909207061	2	501.2971496582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LLTEKEGLV_	REV__ENSG00000198765|ENST00000369522|SYCP1;REV__SYCP1|p.D793Tfs*65|1|0.36|ENSG00000198765|chr1:114977603-114977603|A/-|frameshift_variant;REV__SYCP1|p.K931Rfs*6|1|0.27|ENSG00000198765|chr1:114994781-114994781|A/-|frameshift_variant;REV__SYCP1|p.R882Efs*6|1|0.41|ENSG00000198765|chr1:114984799-114984800|-/A|frameshift_variant	42.396135135203025	0.392153681582562	6				NaN	NaN	0	NaN	10293	3684	13977
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13980	36.063	NaN	3041	30	0	461.95	0.106	+			49722	VYNENLVHM	9	62	559.768688881686	1117.5228248301719	2	559.7695922851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYNENLVHM_	ENSG00000116752|ENST00000369541|BCAS2;ENST00000425064.1_1_1:100858662-100858893:-|nuORF	93.1432384553994	0.056003526918089595	6				NaN	NaN	0	NaN	10294	3684	13977
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13981	36.065	NaN	3313.7	30	0	547	0.106	+			40435	STVLPLYAK	9	66	496.29539868349633	990.5762444337927	2	496.2946472167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STVLPLYAK_	ENSG00000180739|ENST00000333430|S1PR5;ENSG00000267534|ENST00000646641|S1PR2;nc|ENSG00000180739|Q9H228-2|S1PR5	51.33545320467046	0.2872990594074956	6				NaN	NaN	0	NaN	10295	3684	13977
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13982	36.067	NaN	1677	30	0	169.31	0.106	+			11770	FSKVKSLP	8	52	453.2762360168915	904.537919100583	2	453.2759094238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FSKVKSLP_	ENSG00000130762|ENST00000378378|ARHGEF16;ENST00000485984.1_1_1:3389348-3394597:+|nuORF;nc|ENSG00000130762|Q5VV41-2|ARHGEF16	66.42927471994793	0.4381325844043345	6				NaN	NaN	0	NaN	10296	3684	13977
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13983	36.069	NaN	1538.5	30	0	287.66	0.034	+			9334	EIKHSVIF	8	58	486.7805348145444	971.5465166958888	2	486.7803955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EIKHSVIF_	tr|U7STN9|U7STN9_FUSNUGlucose-1-phosphateadenylyltransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=glgCPE=3SV=1	38.80614096846853	0.6637206697844082	6				NaN	NaN	0	NaN	10297	3684	13977
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13984	36.069	NaN	1797.2	30	0	107.31	0.141			+	29472	PCQVPPTAPPA	11	63	539.2717350623844	1076.5289171915688	2	539.274169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PCQVPPTAPPA_	REV__KCNQ2|p.A707T|1|0.47|ENSG00000075043|chr20:63407144-63407144|C/T|missense_variant	42.86426827375447	0.5187511139693657	6				NaN	NaN	0	NaN	10298	3684	13977
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14002	36.109	NaN	22944	30	0	12782	0.214	+			6152	AVQEFGLARFK	11	67	422.57155072644775	1264.6928227795433	3	422.571533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVQEFGLARFK_	ENSG00000169230|ENST00000303204|PRELID1;nc|ENSG00000169230|Q9Y255-2|PRELID1	28.5767321226876	0.690044582712672	6				NaN	NaN	0	NaN	10313	3687	14001
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14003	36.112	NaN	10295	30	0	1468.6	0.106			+	24442	LGDRPFEWR	9	64	392.53654321048725	1174.5878002316617	3	392.5365295410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LGDRPFEWR_	REV__ENSG00000134853|ENST00000257290|PDGFRA;REV__ENST00000509092.5_1_4:55124935-55146696:+|nuORF;REV__nc|ENSG00000134853|P16234-3|PDGFRA;REV__PDGFRA|p.N780Tfs*17|1|0.45|ENSG00000134853|chr4:54285382-54285382|A/-|frameshift_variant	40.05817265558897	0.419577045485086	6				NaN	NaN	0	NaN	10314	3687	14001
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14004	36.114	NaN	1516.9	30	0	121.61	0.106	+			34655	RVRAAFVL	8	56	466.2944701856753	930.5743874381507	2	466.7384948730469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RVRAAFVL_	ENST00000578105.1_1_17:57196729-57196795:-|nuORF	26.79610172149135	0.7524337208463756	6				NaN	NaN	0	NaN	10315	3687	14001
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14005	36.116	NaN	1391.7	30	0	172.46	0.106			+	-1	MSNLLSAVL	9	52	482.2609543974803	NaN	0	482.2608337402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_M(Oxidation (M))SNLLSAVL_	REV__CACNA1D|p.A841Dfs*10|1|0.73|ENSG00000157388|chr3:53732862-53732865|GCCG/-|frameshift_variant;REV__CACNA1D|p.F1318Sfs*6|1|0.39|ENSG00000157388|chr3:53770457-53770457|T/-|frameshift_variant;REV__CACNA1D|p.N2051Tfs*16|1|0.26|ENSG00000157388|chr3:53810254-53810254|A/-|frameshift_variant;REV__ENSG00000102001|ENST00000323022|CACNA1F;REV__ENSG00000157388|ENST00000350061|CACNA1D;REV__nc|ENSG00000102001|O60840-4|CACNA1F;REV__nc|ENSG00000102001|O60840-5|CACNA1F;REV__nc|ENSG00000102001|O60840-6|CACNA1F;REV__nc|ENSG00000102001|O60840-7|CACNA1F;REV__nc|ENSG00000102001|O60840|CACNA1F;REV__nc|ENSG00000157388|Q01668-2|CACNA1D;REV__nc|ENSG00000157388|Q01668-3|CACNA1D;REV__nc|ENSG00000157388|Q01668-4|CACNA1D	58.78195531508484	0.1545138866451181	6				NaN	NaN	0	NaN	10316	3687	14001
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14006	36.118	NaN	1280.7	30	0	197.5	0.106	+			21820	KRELNTAEI	9	57	537.3021850585938	NaN	0	537.3021850585938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KRELNTAEI_	ENST00000517562.2_1_8:91973043-91983329:-|nuORF	32.81241826257853	0.3119040447479903	6				NaN	NaN	0	NaN	10317	3687	14001
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14007	36.12	NaN	1847.8	30	0	125.42	0.035	+			20900	KISAALVPVAA	11	58	520.3292981314222	1038.6440433296443	2	520.3294677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KISAALVPVAA_	ENST00000358738.3_1_14:64971354-64988209:+|nuORF;ENST00000554015.5_1_14:64971609-64988262:+|nuORF;ENST00000555321.1_3_14:64971444-64983366:+|nuORF	39.252832667884924	0.5681665794958463	6				NaN	NaN	0	NaN	10318	3687	14001
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14008	36.12	NaN	1060.7	30	0	93.93	0.139	+			37508	SLLGAVGLAAV	11	49	485.8017746325038	969.5889963318076	2	485.8000183105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SLLGAVGLAAV_	ENSG00000089199|ENST00000378961|CHGB	44.116797842482775	0.5016126852448448	6				NaN	NaN	0	NaN	10319	3687	14001
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14026	36.16	NaN	2689.2	30	0	778.08	0.215	+			44576	TTATGVFSLK	10	63	512.7876517233123	NaN	0	512.7877807617188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTATGVFSLK_	ENSG00000049768|ENST00000376207|FOXP3;nc|ENSG00000290184|Q9BZS1-2|FOXP3;nc|ENSG00000290184|Q9BZS1-3|FOXP3;nc|ENSG00000290184|Q9BZS1-4|FOXP3	49.536043120802724	0.30853568297719935	6				NaN	NaN	0	NaN	10334	3690	14025
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14027	36.163	NaN	2189.7	30	0	243.16	0.106	+			28866	NPYPGDVTKF	10	59	569.2822426503766	1136.549932367553	2	569.2816772460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NPYPGDVTKF_	ENSG00000137073|ENST00000379238|UBAP2;nc|ENSG00000137073|Q5T6F2-2|UBAP2	81.52500206392136	0.18316182710238588	6				NaN	NaN	0	NaN	10335	3690	14025
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14028	36.165	NaN	2365.5	30	0	243.18	0.106	+			9175	EGPQPPMIL	9	56	491.2572447072751	980.4999364813502	2	491.2577819824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EGPQPPMIL_	ENSG00000128731|ENST00000261609|HERC2;ENST00000428453.5_1_15:20588586-20667676:-|nuORF;ENST00000430598.5_1_15:20613931-20667676:-|nuORF;ENST00000437318.5_1_15:20588586-20648641:-|nuORF;ENST00000528584.5_1_15:28900509-28916776:+|nuORF;ENST00000529624.5_3_15:28877823-28916776:+|nuORF;ENST00000530420.5_1_15:28900570-28916776:+|nuORF;nc|ENSG00000290376|Q9BVR0|HERC2P3	71.29570347882199	0.13518600952103718	6				NaN	NaN	0	NaN	10336	3690	14025
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14029	36.167	NaN	1696	30	0	346.19	0.106	+			44097	TPTVIAVHY	9	58	500.7769267085826	999.5393004839652	2	500.77618408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TPTVIAVHY_	C3|p.A1045Pfs*26|1|0.09|ENSG00000125730|chr19:6694452-6694452|C/-|frameshift_variant;CON__Q2UVX4;ENSG00000125730|ENST00000245907|C3	71.37791200682192	0.13483053934309522	6				NaN	NaN	0	NaN	10337	3690	14025
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14030	36.169	NaN	2444	30	0	1045	0.106	+			34727	RVYGQAAAFL	10	56	548.3014526367188	NaN	0	548.3014526367188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RVYGQAAAFL_	ENST00000420563.1_1_2:220267408-220267630:+|nuORF	21.9598887501803	0.4201028297492154	6				NaN	NaN	0	NaN	10338	3690	14025
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14031	36.171	NaN	1689.8	30	0	186.02	0.037	+			23358	KYTQDLSLVT	10	64	584.3155553853563	1166.6165578375126	2	584.3146362304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KYTQDLSLVT_	RDH16|p.C257Y|1|0.3|ENSG00000139547|chr12:56952213-56952213|C/T|missense_variant	59.93077597824379	0.36646980200755325	6				NaN	NaN	0	NaN	10339	3690	14025
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14032	36.171	NaN	1181.1	30	0	131.98	0.14	+			11532	FPEKGYSF	8	56	487.7342654227546	NaN	0	487.7337951660156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FPEKGYSF_	ENSG00000151923|ENST00000436547|TIAL1;ENST00000489822.5_1_10:121336540-121356247:-|nuORF;ENST00000497671.5_1_10:121335179-121339984:-|nuORF;nc|ENSG00000151923|Q01085-2|TIAL1	49.44154591367651	1.7418937515398478	6				NaN	NaN	0	NaN	10340	3690	14025
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14050	36.21	NaN	15198	30	0	3764.3	0.214	+			45363	TVTAQILLK	9	70	493.8158776753673	985.6172024175346	2	493.8153991699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVTAQILLK_	ENSG00000178982|ENST00000248342|EIF3K;ENST00000514461.1_1_4:116964948-116965134:-|nuORF;ENST00000586932.5_1_19:39109833-39116793:+|nuORF;ENST00000593062.5_1_19:39109833-39121488:+|nuORF;nc|ENSG00000178982|Q9UBQ5-2|EIF3K	117.5257442709337	0.022697614825424036	6				NaN	NaN	0	NaN	10355	3693	14049
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14051	36.214	NaN	6835.1	30	0	1574.5	0.106	+			51012	YIYDGELVSK	10	68	593.8032017522538	1185.5918505713075	2	593.8030395507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YIYDGELVSK_	ENSG00000117620|ENST00000533028|SLC35A3;nc|ENSG00000283761|Q9Y2D2-2|SLC35A3	79.48907831485694	0.19979514868675113	6				NaN	NaN	0	NaN	10356	3693	14049
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14052	36.216	NaN	6805.4	30	0	2814.3	0.106			+	26002	LSKPLEKSF	9	67	524.8055480731862	1047.5965432131723	2	524.8057861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSKPLEKSF_	REV__ENSG00000161642|ENST00000394313|ZNF385A;REV__ENST00000552382.5_1_12:54764042-54772879:-|nuORF;REV__nc|ENSG00000161642|Q96PM9-2|ZNF385A;REV__nc|ENSG00000161642|Q96PM9-3|ZNF385A;REV__nc|ENSG00000161642|Q96PM9|ZNF385A	71.87747018426188	0.13267044672804276	6				NaN	NaN	0	NaN	10357	3693	14049
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14053	36.217	NaN	5371.2	30	0	505.74	0.106			+	41813	SVSSLPLKE	9	65	480.2735436119976	958.5325342907952	2	480.271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVSSLPLKE_	REV__ENSG00000133858|ENST00000378743|ZFC3H1;REV__nc|ENSG00000133858|O60293-2|ZFC3H1;REV__ZFC3H1|p.L1693Ffs*10|1|0.1|ENSG00000133858|chr12:71619380-71619381|-/A|frameshift_variant	47.657333605630114	0.33044192980041115	6				NaN	NaN	0	NaN	10358	3693	14049
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14054	36.219	NaN	4115	30	0	411.75	0.106			+	23835	LCVLWSPVL	9	71	515.2947608066032	1028.5749686800064	2	515.2947387695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LCVLWSPVL_	REV__NPHP4|p.A1317P|1|0.38|ENSG00000131697|chr1:5864385-5864385|C/G|missense_variant	47.91560031466742	0.327412564698279	6				NaN	NaN	0	NaN	10359	3693	14049
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14055	36.221	NaN	3652.4	30	0	394.88	0.106	+			37918	SPDPLPVRY	9	60	522.2798173001572	1042.5450816671143	2	522.27978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SPDPLPVRY_	ENGASE|p.D76N|1|0.37|ENSG00000167280|chr17:79077674-79077674|G/A|missense_variant;ENGASE|p.S611Gfs*22|1|0.26|ENSG00000167280|chr17:79085943-79085950|CTGCCAGC/-|frameshift_variant;ENGASE|p.T547Hfs*45|1|0.16|ENSG00000167280|chr17:79085274-79085275|-/C|frameshift_variant;ENGASE|p.T547Pfs*14|2|0.35|ENSG00000167280|chr17:79085275-79085275|C/-|frameshift_variant;ENSG00000167280|ENST00000579016|ENGASE;nc|ENSG00000167280|Q8NFI3-2|ENGASE;nc|ENSG00000167280|Q8NFI3-3|ENGASE	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	10360	3693	14049
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14056	36.223	NaN	1476.1	30	0	111.56	0.035	+			30549	QALAQKGLY	9	55	496.2810974121094	NaN	0	496.2810974121094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QALAQKGLY_	CAMSAP2|p.K1052Rfs*43|1|0.32|ENSG00000118200|chr1:200849887-200849887|A/-|frameshift_variant;CAMSAP2|p.M1437*|7|0.32|ENSG00000118200|chr1:200857892-200857892|A/-|frameshift_variant;ENSG00000118200|ENST00000358823|CAMSAP2;nc|ENSG00000118200|Q08AD1-2|CAMSAP2;nc|ENSG00000118200|Q08AD1|CAMSAP2	30.503639358989545	0.3235605894931338	6				NaN	NaN	0	NaN	10361	3693	14049
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14074	36.259	NaN	34530	30	0	5445.1	0.215	+			27104	MANGAVIHL	9	86	463.24970885712725	924.4848647810545	2	463.24951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MANGAVIHL_	ENSG00000099995|ENST00000215793|SF3A1;nc|ENSG00000099995|Q15459-2|SF3A1	163.84426431716093	0.003817671866125946	6				NaN	NaN	0	NaN	10376	3696	14073
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14075	36.262	NaN	5807.7	30	0	1243.2	0.106	+			47708	VSFGESVLK	9	57	483.2687014032715	964.522849873343	2	483.26837158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSFGESVLK_	ENSG00000105856|ENST00000222574|HBP1;nc|ENSG00000105856|O60381-2|HBP1;nc|ENSG00000105856|O60381-3|HBP1	94.4091291819064	0.0524345700464502	6				NaN	NaN	0	NaN	10377	3696	14073
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14076	36.264	NaN	8571	30	0	2377.6	0.106	+			49032	VVHGGMSIFLK	11	70	594.3339485337392	1186.6533441342783	2	594.3341064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVHGGMSIFLK_	ENST00000264995.7_1_3:131220431-131221595:-|nuORF	84.31045756130733	0.12206600909821903	6				NaN	NaN	0	NaN	10378	3696	14073
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14077	36.266	NaN	3350	30	0	574.07	0.106	+			10706	FAADAVKL	8	51	417.7397290093526	833.4649050855052	2	417.739501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FAADAVKL_	ENSG00000177156|ENST00000319006|TALDO1;ENST00000530666.1_1_11:764238-764842:+|nuORF;nc|ENSG00000177156|P37837-2|TALDO1	93.19546047674547	0.2677966331495483	6				NaN	NaN	0	NaN	10379	3696	14073
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14078	36.268	NaN	2437	30	0	251.84	0.106	+			45870	VAMNIIMSK	9	66	503.77471436680594	NaN	0	503.77490234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VAMNIIMSK_	ENSG00000083642|ENST00000315596|PDS5B;nc|ENSG00000083642|Q9NTI5-2|PDS5B;PDS5B|p.K1268Rfs*8|1|0.07|ENSG00000083642|chr13:32770296-32770296|A/-|frameshift_variant;PDS5B|p.K1287Rfs*22|1|0.26|ENSG00000083642|chr13:32770351-32770351|A/-|frameshift_variant;PDS5B|p.N1390Cfs*12|1|0.44|ENSG00000083642|chr13:32770750-32770751|AA/-|frameshift_variant;PDS5B|p.S1198Vfs*10|1|0.28|ENSG00000083642|chr13:32764556-32764556|A/-|frameshift_variant	70.8162118820467	0.10318768208603292	6				NaN	NaN	0	NaN	10380	3696	14073
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14079	36.27	NaN	3519	30	0	524.98	0.106	+			42203	TAAFLHFF	8	68	477.2453265703973	NaN	0	477.2450866699219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TAAFLHFF_	ADGRB2|p.L1141Cfs*35|1|0.34|ENSG00000121753|chr1:31735214-31735214|G/-|frameshift_variant;ENSG00000121753|ENST00000373658|ADGRB2;nc|ENSG00000121753|O60241-2|ADGRB2;nc|ENSG00000121753|O60241-3|ADGRB2;nc|ENSG00000121753|O60241-4|ADGRB2	57.452649787351945	1.7418937515398478	6				NaN	NaN	0	NaN	10381	3696	14073
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14080	36.271	NaN	6054.9	30	0	1737.9	0.036			+	-1	EKREGLMPD	9	60	545.7638974651393	1089.5132419970785	2	546.76611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_EKREGLM(Oxidation (M))PD_	REV__ENSG00000075945|ENST00000361580|KIFAP3;REV__ENST00000538366.5_1_1:170010937-170043656:-|nuORF;REV__KIFAP3|p.C203Vfs*22|2|0.18|ENSG00000075945|chr1:170035464-170035464|A/-|frameshift_variant;REV__KIFAP3|p.E347Gfs*10|1|0.14|ENSG00000075945|chr1:170016605-170016606|-/C|frameshift_variant;REV__nc|ENSG00000075945|Q92845-3|KIFAP3	42.396135135203025	0.392153681582562	6				NaN	NaN	0	NaN	10382	3696	14073
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14098	36.306	NaN	16917	30	0	2536.8	0.214	+			28373	NELGLLVAF	9	88	488.2784739314995	974.542394929799	2	488.2806701660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NELGLLVAF_	ENST00000528614.1_1_11:111285201-111285411:-|nuORF	55.50420428727701	0.2510918378945873	6				NaN	NaN	0	NaN	10397	3699	14097
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14099	36.31	NaN	14559	30	0	3883.6	0.106	+			17102	HSGPVIPVY	9	58	484.7636346038904	967.5127162745808	2	484.76361083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HSGPVIPVY_	ENSG00000114315|ENST00000232424|HES1	85.35947970620816	0.07794846947388434	6				NaN	NaN	0	NaN	10398	3699	14097
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14100	36.312	NaN	3922.5	30	0	835.26	0.106	+			10838	FASKALEL	8	51	439.7527542017472	877.4909554702945	2	439.7525634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FASKALEL_	ENSG00000115183|ENST00000263635|TANC1;ENST00000470074.1_1_2:160076105-160087520:+|nuORF;nc|ENSG00000115183|Q9C0D5-2|TANC1	133.8126618989323	0.23527224284755519	6				NaN	NaN	0	NaN	10399	3699	14097
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14101	36.313	NaN	7382.7	30	0	1252.9	0.106	+			27688	MPVDPNKPT	9	76	499.7526989408513	997.4908449485026	2	499.7527160644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MPVDPNKPT_	ING5|p.E185K|1|0.21|ENSG00000168395|chr2:241723009-241723009|G/A|missense_variant	63.30626980617807	0.18605348971131092	6				NaN	NaN	0	NaN	10400	3699	14097
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14102	36.315	NaN	3849.1	30	0	629.11	0.106	+			48231	VTAVPTLLK	9	57	471.3050649049677	940.5955768767354	2	471.30499267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTAVPTLLK_	ENSG00000129235|ENST00000250101|TXNDC17;ENST00000571029.1_1_17:6544987-6546336:+|nuORF	87.69643885390035	0.07135982304947239	6				NaN	NaN	0	NaN	10401	3699	14097
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14103	36.317	NaN	2353.9	30	0	494.56	0.106	+			19010	IVVQTSWVK	9	64	530.313564831235	1058.61257672927	2	530.3132934570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IVVQTSWVK_	ENST00000399975.7_1_21:30408602-30409641:+|nuORF;ENST00000399976.6_1_21:30408602-30409641:+|nuORF	132.757866228626	0.013877640931359021	6				NaN	NaN	0	NaN	10402	3699	14097
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14104	36.319	NaN	11135	30	0	3439.1	0.035	+			18978	IVSDFTIGR	9	69	504.2795007726725	1006.5444486121451	2	504.2786560058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IVSDFTIGR_	ENSG00000110713|ENST00000324932|NUP98;nc|ENSG00000110713|P52948-2|NUP98;nc|ENSG00000110713|P52948-3|NUP98;nc|ENSG00000110713|P52948-4|NUP98;nc|ENSG00000110713|P52948-6|NUP98;nc|ENSG00000110713|P52948|NUP98;NUP98|p.N1328Tfs*89|2|0.22|ENSG00000110713|chr11:3699159-3699159|T/-|frameshift_variant	141.52041321563706	0.009766778904176347	6				NaN	NaN	0	NaN	10403	3699	14097
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14122	36.356	NaN	16119	30	0	3539.6	0.214			+	10261	ETLKQITL	8	81	473.2838256320407	944.5530983308814	2	473.2841491699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ETLKQITL_	REV__tr|U7ST18|U7ST18_FUSNURibosomalRNAsmallsubunitmethyltransferaseEOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01248PE=3SV=1	96.19043198914106	0.25873003980794995	6				NaN	NaN	0	NaN	10418	3702	14121
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14123	36.36	NaN	11096	30	0	1599	0.106	+			6541	AYGKDFHLI	9	70	532.2823529434751	1062.55015295375	2	532.2825317382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AYGKDFHLI_	ENSG00000198160|ENST00000401041|MIER1;nc|ENSG00000198160|Q8N108-13|MIER1;nc|ENSG00000198160|Q8N108-14|MIER1;nc|ENSG00000198160|Q8N108-15|MIER1;nc|ENSG00000198160|Q8N108-16|MIER1;nc|ENSG00000198160|Q8N108-17|MIER1;nc|ENSG00000198160|Q8N108-18|MIER1;nc|ENSG00000198160|Q8N108-19|MIER1;nc|ENSG00000198160|Q8N108|MIER1	68.78682469695295	0.14603441672067394	6				NaN	NaN	0	NaN	10419	3702	14121
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14124	36.362	NaN	10197	30	0	1188.3	0.106	+			44442	TSMLYVVGK	9	76	499.27312012432697	996.531687315454	2	499.2728576660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TSMLYVVGK_	ENSG00000106789|ENST00000375077|CORO2A	93.1432384553994	0.056003526918089595	6				NaN	NaN	0	NaN	10420	3702	14121
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14125	36.363	NaN	2881.1	30	0	351.5	0.106	+			42477	TAMTKALAL	9	65	460.2676276387307	918.5207023442614	2	460.2674560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TAMTKALAL_	ENSG00000087076|ENST00000263278|HSD17B14	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	10421	3702	14121
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14126	36.365	NaN	4078.1	30	0	360.18	0.106	+			51505	YVPYDDPY	8	71	516.2208207387105	1030.4270885442209	2	515.7225952148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YVPYDDPY_	ENSG00000198734|ENST00000367797|F5;F5|p.G1754Efs*13|1|0.41|ENSG00000198734|chr1:169529768-169529768|T/-|frameshift_variant;F5|p.S1606Pfs*5|1|0.07|ENSG00000198734|chr1:169536662-169536663|-/CTGAAGTGGA|frameshift_variant	37.028477286268924	0.6747514403204248	6				NaN	NaN	0	NaN	10422	3702	14121
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14127	36.367	NaN	3199.1	30	0	479.19	0.106			+	47163	VLSLGLAGAL	10	67	457.2894720046604	912.5643910761208	2	457.28912353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VLSLGLAGAL_	REV__ENSG00000089060|ENST00000680972|SLC8B1;REV__nc|ENSG00000089060|Q6J4K2-2|SLC8B1	34.172542307311794	0.6007644933930345	6				NaN	NaN	0	NaN	10423	3702	14121
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14128	36.369	NaN	1222.1	30	0	128.67	0.033	+			48221	VTAVASLLK	9	54	451.28948974609375	NaN	0	451.28948974609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VTAVASLLK_	ENSG00000101850|ENST00000467482|GPR143	44.377184641726394	0.24544280798894275	6				NaN	NaN	0	NaN	10424	3702	14121
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14146	36.405	NaN	10143	30	0	999.77	0.214	+			10468	EVNSGFFYK	9	69	545.7638974651393	1089.5132419970785	2	545.7639770507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EVNSGFFYK_	CCT6A|p.I274*|1|0.21|ENSG00000146731|chr7:56058450-56058450|A/-|frameshift_variant;CCT6B|p.I274*|1|0.1|ENSG00000132141|chr17:34942549-34942549|T/-|frameshift_variant;ENSG00000132141|ENST00000314144|CCT6B;ENSG00000146731|ENST00000275603|CCT6A;ENST00000482776.1_1_7:56124009-56126486:+|nuORF;nc|ENSG00000132141|Q92526-2|CCT6B;nc|ENSG00000132141|Q92526-3|CCT6B;nc|ENSG00000146731|P40227-2|CCT6A	101.60071028292904	0.0375685401170269	6				NaN	NaN	0	NaN	10439	3705	14145
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14147	36.408	NaN	11386	30	0	1842.8	0.106	+			18710	ITEPKAVFA	9	73	488.2784739314995	974.542394929799	2	488.7776794433594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ITEPKAVFA_	ENSG00000154358|ENST00000680850|OBSCN;nc|ENSG00000154358|Q5VST9-2|OBSCN;nc|ENSG00000154358|Q5VST9-3|OBSCN;nc|ENSG00000154358|Q5VST9-5|OBSCN;nc|ENSG00000154358|Q5VST9-6|OBSCN;nc|ENSG00000154358|Q5VST9|OBSCN;OBSCN|p.E4688Dfs*35|1|0.03|ENSG00000154358|chr1:228318105-228318106|-/CATCTTC|frameshift_variant;OBSCN|p.E4729Rfs*7|1|0.37|ENSG00000154358|chr1:228318930-228318931|-/C|frameshift_variant;OBSCN|p.G1702Vfs*37|2|0.36|ENSG00000154358|chr1:228268769-228268769|G/-|frameshift_variant;OBSCN|p.H7050Tfs*22|1|0.11|ENSG00000154358|chr1:228371922-228371922|C/-|frameshift_variant;OBSCN|p.P6994Lfs*78|1|0.15|ENSG00000154358|chr1:228371756-228371756|C/-|frameshift_variant;OBSCN|p.S5232Ffs*24|1|0.21|ENSG00000154358|chr1:228332900-228332901|-/T|frameshift_variant;OBSCN|p.V3709Sfs*15|1|0.03|ENSG00000154358|chr1:228293609-228293610|-/A|frameshift_variant	50.0245360154114	0.3026755932229825	6				NaN	NaN	0	NaN	10440	3705	14145
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14148	36.41	NaN	5870.1	30	0	2735	0.106				-1	 	0	62	372.7176614117768	743.4207698903537	2	372.7174377441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10441	3705	14145
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14149	36.412	NaN	3490.3	30	0	535.52	0.106	+			17332	IAIDGGKVL	9	56	443.2736776272178	884.5328023212356	2	443.2735595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IAIDGGKVL_	ENSG00000132952|ENST00000255304|USPL1;USPL1|p.N138S|1|0.29|ENSG00000132952|chr13:30631019-30631019|A/G|missense_variant	113.41158876095287	0.025516849225023126	6				NaN	NaN	0	NaN	10442	3705	14145
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14150	36.414	NaN	2894.4	30	0	246.06	0.106	+			28864	NPWDNKAVY	9	63	553.7667364312784	1105.5189199293568	2	553.7673950195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NPWDNKAVY_	ENSG00000162298|ENST00000377190|SYVN1;ENST00000449943.5_1_11:64897669-64899838:-|nuORF;ENST00000529207.5_1_11:64898917-64899817:-|nuORF;nc|ENSG00000162298|Q86TM6-2|SYVN1;nc|ENSG00000162298|Q86TM6-3|SYVN1;SYVN1|p.N368Qfs*129|1|0.33|ENSG00000162298|chr11:65130663-65130664|-/G|frameshift_variant;SYVN1|p.N368Tfs*117|1|0.4|ENSG00000162298|chr11:65130664-65130664|G/-|frameshift_variant	28.081489160057373	0.5408112046645406	6				NaN	NaN	0	NaN	10443	3705	14145
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14151	36.416	NaN	2239.8	30	0	406.16	0.106			+	26201	LSSALPFVQ	9	57	481.27325439453125	NaN	0	481.27325439453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSSALPFVQ_	REV__ENSG00000181472|ENST00000325144|ZBTB2;REV__ZBTB2|p.F476Lfs*3|1|0.24|ENSG00000181472|chr6:151365638-151365638|A/-|frameshift_variant	51.33545320467046	0.19748963086191895	6				NaN	NaN	0	NaN	10444	3705	14145
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14152	36.418	NaN	2754.1	30	0	908.67	0.034			+	37176	SIYITNLL	8	51	468.7736643815876	935.5327758299752	2	468.7736511230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SIYITNLL_	REV__tr|U7T4H8|U7T4H8_FUSNUSpermidine/putrescinetransportsystempermeaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00343PE=3SV=1	49.44154591367651	0.597725784090933	6				NaN	NaN	0	NaN	10445	3705	14145
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14170	36.455	NaN	15147	30	0	2302.2	0.214	+			46211	VEAGGMQAL	9	59	438.2181428520788	874.4217327709576	2	438.21807861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VEAGGMQAL_	ENSG00000168036|ENST00000349496|CTNNB1;ENSG00000173801|ENST00000393931|JUP	148.04295825190792	0.0073252839830139265	6				NaN	NaN	0	NaN	10460	3708	14169
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14171	36.459	NaN	3402.3	30	0	464.7	0.106			+	-1	MSVAQWGAY	9	64	514.7286470141792	1027.4427410951582	2	514.72900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_M(Oxidation (M))SVAQWGAY_	REV__ENSG00000087301|ENST00000281741|TXNDC16	53.351449002276354	0.2690372970092375	6				NaN	NaN	0	NaN	10461	3708	14169
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14172	36.461	NaN	3909.1	30	0	542.18	0.106	+			48457	VTLHDMILK	9	67	535.3076363887243	1068.6007198442485	2	535.3078002929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTLHDMILK_	ENSG00000131467|ENST00000590720|PSME3;nc|ENSG00000131467|P61289-2|PSME3;nc|ENSG00000131467|P61289-3|PSME3	82.7504851949679	0.08565546331141553	6				NaN	NaN	0	NaN	10462	3708	14169
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14173	36.463	NaN	9126.2	30	0	1895.6	0.106	+			48561	VTPQGGIVVY	10	69	516.7898060750213	1031.5650592168424	2	516.7909545898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTPQGGIVVY_	ENSG00000104731|ENST00000270583|KLHDC4;ENST00000562913.5_1_16:87744798-87760508:-|nuORF;ENST00000566349.5_1_16:87741959-87776602:-|nuORF;KLHDC4|p.R361Qfs*9|1|0.36|ENSG00000104731|chr16:87709632-87709633|-/C|frameshift_variant;KLHDC4|p.R412Gfs*28|1|0.34|ENSG00000104731|chr16:87709478-87709478|G/-|frameshift_variant;nc|ENSG00000104731|Q8TBB5-2|KLHDC4;nc|ENSG00000104731|Q8TBB5-3|KLHDC4	39.252832667884924	0.5560298534376815	6				NaN	NaN	0	NaN	10463	3708	14169
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14174	36.464	NaN	4056.2	30	0	572.99	0.106	+			48558	VTPNVEPFL	9	76	508.2752831149938	1014.5360132967876	2	508.2750549316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTPNVEPFL_	ENSG00000121350|ENST00000240651|PYROXD1;ENST00000536851.1_1_12:21613985-21615680:+|nuORF;nc|ENSG00000121350|Q8WU10-2|PYROXD1	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	10464	3708	14169
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14175	36.466	NaN	1747.2	30	0	178.03	0.035	+			36917	SIIQPGCFK	9	55	496.7648260091498	991.5150990850996	2	496.7652587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SIIQPGCFK_	ENSG00000176387|ENST00000326152|HSD11B2	44.377184641726394	0.36891676396732553	6				NaN	NaN	0	NaN	10465	3708	14169
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14176	36.467	NaN	3002.9	30	0	367.84	0.139	+			8029	DTSAAYKSI	9	63	478.2401091863531	NaN	0	478.24078369140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DTSAAYKSI_	DMXL1|p.N3021Mfs*3|1|0.28|ENSG00000172869|chr5:119247193-119247193|A/-|frameshift_variant;DMXL1|p.S1844Vfs*9|1|0.1|ENSG00000172869|chr5:119170317-119170317|A/-|frameshift_variant;ENSG00000172869|ENST00000539542|DMXL1;nc|ENSG00000172869|Q9Y485|DMXL1	90.36981228632155	0.04085092656593507	6				NaN	NaN	0	NaN	10466	3708	14169
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14194	36.506	NaN	10710	30	0	1793.5	0.214	+			656	AEAEKVLAL	9	66	472.2765154408496	942.5384779484992	2	472.2763366699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEAEKVLAL_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	82.7504851949679	0.08565546331141553	6				NaN	NaN	0	NaN	10481	3711	14193
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14195	36.51	NaN	1448	30	0	398.39	0.106			+	23638	LAQPTACGP	9	41	429.21288300933	856.4112130854601	2	429.2125244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LAQPTACGP_	REV__ENST00000485901.1_1_6:32974617-32975137:-|nuORF	29.14955571784316	0.5308295550522326	6				NaN	NaN	0	NaN	10482	3711	14193
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14196	36.512	NaN	1424.7	30	0	185.97	0.106	+			11046	FEMAVAKV	8	56	447.74124846007334	893.4679439869467	2	447.7408752441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FEMAVAKV_	ENSG00000087191|ENST00000310144|PSMC5;ENST00000579147.5_1_17:61906826-61909326:+|nuORF;ENST00000584657.1_1_17:61909038-61909326:+|nuORF;nc|ENSG00000087191|P62195-2|PSMC5	58.78195531508484	0.5138399468736706	6				NaN	NaN	0	NaN	10483	3711	14193
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14197	36.514	NaN	2439.6	30	0	123.62	0.106				-1	NVTCNLPVY	9	71	540.2629878303453	1078.5114227274905	2	541.2653198242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_NVTC(Carbamidomethyl (C))NLPVY_	ENST00000378654.8_1_13:48517190-48517361:-|nuORF	44.116797842482775	0.37197099687881774	6				NaN	NaN	0	NaN	10484	3711	14193
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14198	36.515	NaN	2027.2	30	0	288.55	0.106			+	10661	EYREKQRRREE	11	60	526.9419012408677	1577.8038743228028	3	527.2764282226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EYREKQRRREE_	REV__ENSG00000125351|ENST00000276201|UPF3B;REV__nc|ENSG00000125351|Q9BZI7-2|UPF3B	14.086013023434994	0.8045329596154472	6				NaN	NaN	0	NaN	10485	3711	14193
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14199	36.517	NaN	1841.9	30	0	332.08	0.039			+	8574	EAYKDELHKM	10	56	421.87301730726745	1262.5972225220023	3	421.8734130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EAYKDELHKM_	REV__ENSG00000162994|ENST00000401408|CLHC1;REV__nc|ENSG00000162994|Q8NHS4-2|CLHC1	30.568863376406313	0.6301935916953115	6				NaN	NaN	0	NaN	10486	3711	14193
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14200	36.518	NaN	1078.8	30	0	190.87	0.143			+	25423	LPLVHMWALH	10	42	608.8381202353819	1215.6616875375637	2	608.8383178710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LPLVHMWALH_	REV__ENST00000567020.6_2_16:2551598-2552264:+|nuORF	56.72105179125745	0.3956618550748046	6				NaN	NaN	0	NaN	10487	3711	14193
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14218	36.555	NaN	96516	30	0	22384	0.214	+			29001	NSNDVFVLK	9	89	518.2772648173034	1034.5399767014067	2	518.2772827148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NSNDVFVLK_	ENSG00000006747|ENST00000297029|SCIN;ENSG00000127831|ENST00000248444|VIL1;nc|ENSG00000006747|Q9Y6U3-3|SCIN	169.6522961985778	0.0028262690464207238	6				NaN	NaN	0	NaN	10502	3714	14217
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14219	36.559	NaN	7405.3	30	0	1439.8	0.106	+			43676	TKDLLFRD	8	61	504.2795007726725	1006.5444486121451	2	505.2816467285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TKDLLFRD_	ENSG00000091513|ENST00000402696|TF;ENST00000461695.1_1_3:133489395-133497461:+|nuORF;ENST00000467842.1_1_3:133494266-133496087:+|nuORF;nc|ENSG00000091513|P02787|TF	60.97194046774394	0.49215940876911696	6				NaN	NaN	0	NaN	10503	3714	14217
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14220	36.561	NaN	5543.2	30	0	1262.8	0.106	+			44417	TSLPSFVTK	9	62	490.27662635472535	978.5386997762507	2	490.2765808105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TSLPSFVTK_	ENSG00000188647|ENST00000340434|PTAR1;ENST00000467511.1_1_9:72346973-72349163:-|nuORF;PTAR1|p.D254Efs*8|1|0.05|ENSG00000188647|chr9:69723511-69723512|-/ATCTTATTGAT|frameshift_variant	56.43379154798735	0.2433427591689151	6				NaN	NaN	0	NaN	10504	3714	14217
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14221	36.563	NaN	5924	30	0	1267.1	0.106			+	24775	LIELLDDNSL	10	58	572.8092352003674	1143.6039174675348	2	572.809326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LIELLDDNSL_	REV__DNAH2|p.I2363Yfs*40|1|0.31|ENSG00000183914|chr17:7792278-7792278|C/-|frameshift_variant;REV__DNAH2|p.K4326Rfs*84|3|0.27|ENSG00000183914|chr17:7832920-7832920|C/-|frameshift_variant;REV__DNAH2|p.Q4263Sfs*13|1|0.12|ENSG00000183914|chr17:7832639-7832639|C/-|frameshift_variant;REV__ENSG00000183914|ENST00000572933|DNAH2;REV__ENST00000574518.1_1_17:7674005-7689702:+|nuORF;REV__nc|ENSG00000183914|Q9P225-2|DNAH2	70.39856735676683	0.27406383984062843	6				NaN	NaN	0	NaN	10505	3714	14217
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14222	36.565	NaN	2955	30	0	582.83	0.106			+	50262	WQNELQVY	8	60	540.2629878303453	1078.5114227274905	2	540.26416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_WQNELQVY_	REV__ENSG00000173275|ENST00000339249|ZNF449	40.5726180659479	0.6527593143185008	6				NaN	NaN	0	NaN	10506	3714	14217
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14223	36.566	NaN	1328.3	30	0	147.87	0.037	+			16395	HEQEEIFKL	9	56	586.8009823184651	1171.5874117037301	2	586.80126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HEQEEIFKL_	ENSG00000146872|ENST00000346027|TLK2;ENSG00000198586|ENST00000431350|TLK1;ENST00000414066.1_1_10:38107898-38108846:-|nuORF;ENST00000530992.1_1_17:32364642-32365872:-|nuORF;nc|ENSG00000146872|Q86UE8-3|TLK2;nc|ENSG00000146872|Q86UE8|TLK2;nc|ENSG00000198586|Q9UKI8-2|TLK1;nc|ENSG00000198586|Q9UKI8-3|TLK1;nc|ENSG00000198586|Q9UKI8-4|TLK1;nc|ENSG00000198586|Q9UKI8-5|TLK1	49.536043120802724	0.308405419312776	6				NaN	NaN	0	NaN	10507	3714	14217
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14224	36.567	NaN	2948.9	30	0	695.75	0.14			+	19533	KAWLTHML	8	62	508.2752831149938	1014.5360132967876	2	507.7773132324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_KAWLTHM(Oxidation (M))L_	REV__ENSG00000205857|ENST00000382119|NANOGNB;REV__NANOGNB|p.C151Vfs*21|1|0.43|ENSG00000205857|chr12:7770451-7770451|T/-|frameshift_variant	57.81127852772723	0.5234495074909924	6				NaN	NaN	0	NaN	10508	3714	14217
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14242	36.606	NaN	18576	30	0	4816	0.214	+			43380	TGFNGKLVY	9	66	499.7691560221847	997.5237591111694	2	499.7686462402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TGFNGKLVY_	ENSG00000083857|ENST00000441802|FAT1;FAT1|p.G2934Vfs*3|2|0.37|ENSG00000083857|chr4:186617787-186617787|T/-|frameshift_variant;FAT1|p.K1225Nfs*9|1|0.03|ENSG00000083857|chr4:186636885-186636885|G/-|frameshift_variant;FAT1|p.N3847Yfs*7|1|0.03|ENSG00000083857|chr4:186601370-186601371|-/TTATA|frameshift_variant;FAT1|p.P3228Lfs*42|1|0.27|ENSG00000083857|chr4:186611556-186611556|G/-|frameshift_variant;FAT1|p.P4313Lfs*36|1|0.34|ENSG00000083857|chr4:186596602-186596602|G/-|frameshift_variant;FAT1|p.Q2933Hfs*14|1|0.33|ENSG00000083857|chr4:186617787-186617788|-/G|frameshift_variant;FAT1|p.T1364Yfs*8|1|0.23|ENSG00000083857|chr4:186636118-186636119|-/A|frameshift_variant;FAT1|p.V1878Cfs*8|2|0.22|ENSG00000083857|chr4:186620955-186620956|-/G|frameshift_variant	112.41091882917199	0.026537921851008135	6				NaN	NaN	0	NaN	10523	3717	14241
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14243	36.61	NaN	20707	30	0	11138	0.106	+			32222	QTAQIFFTK	9	78	542.2953060468152	1082.5760591604303	2	542.2955932617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QTAQIFFTK_	ENSG00000167778|ENST00000301463|SPRYD3	68.84614121027924	0.14577793175421136	6				NaN	NaN	0	NaN	10524	3717	14241
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14244	36.612	NaN	4944.6	30	0	618.02	0.106	+			45352	TVSSVNEAF	9	65	477.23227736777534	952.4500018023507	2	477.2319641113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVSSVNEAF_	ENSG00000136045|ENST00000412830|PWP1	71.87747018426188	0.13267044672804276	6				NaN	NaN	0	NaN	10525	3717	14241
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14245	36.614	NaN	2387	30	0	1048.2	0.106	+			26746	LVMTHLILK	9	36	356.5595214509692	1066.6567349531076	3	356.5596008300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LVMTHLILK_	ENSG00000010292|ENST00000315579|NCAPD2;ENST00000535804.1_1_12:6637788-6638275:+|nuORF	32.81241826257853	0.4965981579233955	6				NaN	NaN	0	NaN	10526	3717	14241
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14246	36.616	NaN	1621	30	0	188.07	0.106			+	37723	SLTALKLGLA	10	59	493.8158776753673	985.6172024175346	2	493.8153076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SLTALKLGLA_	REV__ENSG00000170837|ENST00000304411|GPR27	33.03940026070387	0.6100181892187303	6				NaN	NaN	0	NaN	10527	3717	14241
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14247	36.617	NaN	1486.8	30	0	182.61	0.034	+			27085	MALMTVLF	8	54	463.2483215332031	NaN	0	463.2483215332031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MALMTVLF_	PTGDR|p.L267M|1|0.17|ENSG00000168229|chr14:52268613-52268613|C/A|missense_variant	35.200714571348534	1.7418937515398478	6				NaN	NaN	0	NaN	10528	3717	14241
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14248	36.618	NaN	2054.1	30	0	232.13	0.14			+	42170	SYTLNVPPE	9	67	510.25527440797885	NaN	0	510.2559509277344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SYTLNVPPE_	REV__ENSG00000162078|ENST00000382280|ZG16B	49.44154591367651	0.21054156626303966	6				NaN	NaN	0	NaN	10529	3717	14241
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14266	36.657	NaN	6592.5	30	0	1027.3	0.214	+			48543	VTNVTSLLK	9	65	487.7976389149029	973.5807248966058	2	487.79736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTNVTSLLK_	ENSG00000137076|ENST00000314888|TLN1;ENSG00000171914|ENST00000636159|TLN2;nc|ENSG00000137076|Q9Y490-2|TLN1	106.88024417677582	0.032181361622142884	6				NaN	NaN	0	NaN	10544	3720	14265
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14267	36.661	NaN	2777	30	0	241.79	0.106			+	29053	NTFPSATFGA	10	64	506.74039844960447	1011.466243966009	2	506.7400207519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NTFPSATFGA_	REV__CDC14A|p.P551Qfs*30|1|0.33|ENSG00000079335|chr1:100499154-100499154|C/-|frameshift_variant;REV__ENSG00000079335|ENST00000336454|CDC14A;REV__nc|ENSG00000079335|Q9UNH5-2|CDC14A;REV__nc|ENSG00000079335|Q9UNH5-5|CDC14A	52.936696900407355	0.4300801048568001	6				NaN	NaN	0	NaN	10545	3720	14265
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14268	36.663	NaN	2608.9	30	0	566.15	0.106	+			17103	HSGPVIPVY	9	57	484.7636346038904	967.5127162745808	2	484.76348876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HSGPVIPVY_	ENSG00000114315|ENST00000232424|HES1	40.5726180659479	0.4135428067754104	6				NaN	NaN	0	NaN	10546	3720	14265
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14269	36.665	NaN	2324.9	30	0	445.2	0.106			+	-1	TSGSVCKAAEQ	11	60	569.2660431264761	NaN	0	569.2662963867188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_TSGSVC(Carbamidomethyl (C))KAAEQ_	REV__ENSG00000114670|ENST00000383366|NEK11;REV__ENST00000506695.5_1_3:130748540-130852801:+|nuORF;REV__nc|ENSG00000114670|Q8NG66-2|NEK11;REV__nc|ENSG00000114670|Q8NG66-3|NEK11;REV__nc|ENSG00000114670|Q8NG66-4|NEK11	40.05817265558897	0.3867246477658885	6				NaN	NaN	0	NaN	10547	3720	14265
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14270	36.667	NaN	2245.4	30	0	300.96	0.106	+			862	AEGTVVSNL	9	52	445.23507298852667	NaN	0	445.2352600097656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEGTVVSNL_	ENSG00000081870|ENST00000194214|IFT25;ENST00000489675.1_1_1:54387326-54394129:-|nuORF	58.22992032128504	0.15686832049467786	6				NaN	NaN	0	NaN	10548	3720	14265
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14271	36.669	NaN	2414.5	30	0	450.58	0.037				-1	LCIPLWICI	9	50	377.54170399780844	1129.6032825936254	3	377.5417175292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_LC(Carbamidomethyl (C))IPLWICI_	ENSG00000132164|ENST00000254488|SLC6A11;ENST00000464828.1_1_3:10975690-10977074:+|nuORF	21.9598887501803	0.5980208138527809	6				NaN	NaN	0	NaN	10549	3720	14265
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14272	36.669	NaN	1219.4	30	0	103.21	0.14	+			35323	SANDFQVFK	9	60	528.2618987716265	NaN	0	528.26171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SANDFQVFK_	ENSG00000177853|ENST00000316045|ZNF518A;ZNF518A|p.I1254Nfs*11|1|0.18|ENSG00000177853|chr10:96160075-96160076|-/A|frameshift_variant;ZNF518A|p.L1107Ffs*8|1|0.31|ENSG00000177853|chr10:96159635-96159636|-/T|frameshift_variant;ZNF518A|p.N426Mfs*2|1|0.29|ENSG00000177853|chr10:96157595-96157595|A/-|frameshift_variant;ZNF518A|p.R303Kfs*10|1|0.3|ENSG00000177853|chr10:96157223-96157224|-/A|frameshift_variant	36.446750945000026	0.29355505452396785	6				NaN	NaN	0	NaN	10550	3720	14265
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14290	36.708	NaN	14182	30	0	1579.6	0.214	+			51161	YPAQGVQQF	9	72	519.2564557354916	1036.4983585377831	2	519.2567138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YPAQGVQQF_	EIF4G1|p.P1229Qfs*2|1|0.18|ENSG00000114867|chr3:184327606-184327606|C/-|frameshift_variant;EIF4G1|p.T436Hfs*40|1|0.21|ENSG00000114867|chr3:184321883-184321884|-/C|frameshift_variant;ENSG00000114867|ENST00000346169|EIF4G1;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1	138.24224950522367	0.011304696901763419	6				NaN	NaN	0	NaN	10565	3723	14289
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14291	36.712	NaN	3121	30	0	861.92	0.106			+	4869	ATQALVVLV	9	61	457.2894720046604	912.5643910761208	2	457.28936767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATQALVVLV_	REV__ENSG00000215547|ENST00000400552|DEFB115	24.20275056022122	0.577060078256802	6				NaN	NaN	0	NaN	10566	3723	14289
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14292	36.714	NaN	1624.7	30	0	191.45	0.106				-1	VATNVAACGLD	11	55	545.7638974651393	1089.5132419970785	2	546.768310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_VATNVAAC(Carbamidomethyl (C))GLD_	ENST00000438163.1_1_2:32427889-32428366:+|nuORF	21.68575002086885	0.7623253651248338	6				NaN	NaN	0	NaN	10567	3723	14289
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14293	36.716	NaN	1512.7	30	0	158.4	0.106	+			42249	TAAPVEVSTTY	11	51	569.7850952148438	NaN	0	569.7850952148438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TAAPVEVSTTY_	ENSG00000205277|ENST00000536621|MUC12;ENSG00000205277|ENST00000536621|MUC12;nc|ENSG00000205277|Q9UKN1|MUC12;nc|ENSG00000205277|Q9UKN1|MUC12	37.81151784470057	0.3969060959064013	6				NaN	NaN	0	NaN	10568	3723	14289
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14294	36.718	NaN	1340.3	30	0	128.87	0.038				-1	VGICKPLHYM	10	48	392.86894738321024	NaN	0	392.8697509765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_VGICKPLHYM(Oxidation (M))_	OR4C16|p.D123G|1|0.33|ENSG00000279514|chr11:55572495-55572495|A/G|missense_variant	23.52269567125451	0.42010282974921537	6				NaN	NaN	0	NaN	10569	3723	14289
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14312	36.754	NaN	39169	30	0	8040.2	0.214	+			14494	GTCLFVAVK	9	82	497.77330355850165	993.5320541838033	2	497.7731018066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GTC(Carbamidomethyl (C))LFVAVK_	ENSG00000198752|ENST00000361246|CDC42BPB	148.04295825190792	0.0073252839830139265	6				NaN	NaN	0	NaN	10584	3726	14311
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14313	36.758	NaN	4891.8	30	0	2713.7	0.106	+			40820	SVEEISTLVQK	11	46	411.5626660829571	1231.6661688490713	3	411.5626525878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVEEISTLVQK_	ENSG00000055950|ENST00000318364|MRPL43;nc|ENSG00000055950|Q8N983-2|MRPL43;nc|ENSG00000055950|Q8N983-3|MRPL43;nc|ENSG00000055950|Q8N983-6|MRPL43;nc|ENSG00000055950|Q8N983-7|MRPL43;nc|ENSG00000055950|Q8N983|MRPL43	41.42661286455405	0.5384226294179143	6				NaN	NaN	0	NaN	10585	3726	14311
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14314	36.76	NaN	1533.7	30	0	144.13	0.106	+			37806	SMGAVQQF	8	48	434.2050015619791	NaN	0	434.20501708984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SMGAVQQF_	ENSG00000138190|ENST00000260762|EXOC6;nc|ENSG00000138190|Q8TAG9-2|EXOC6	87.75429964447693	1.7418937515398478	6				NaN	NaN	0	NaN	10586	3726	14311
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14315	36.762	NaN	2112.6	30	0	219.5	0.106	+			25097	LLPAGLASF	9	48	444.7622760821373	887.5099992310746	2	444.76141357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LLPAGLASF_	CLEC18B|p.L224Sfs*11|1|0.12|ENSG00000140839|chr16:74413044-74413044|C/-|frameshift_variant;CLEC18B|p.Y150Tfs*26|1|0.45|ENSG00000140839|chr16:74418067-74418067|A/-|frameshift_variant;ENSG00000140839|ENST00000682950|CLEC18B;ENSG00000157335|ENST00000541793|CLEC18C;ENST00000564976.5_1_16:70208088-70217795:+|nuORF;ENST00000569201.6_1_16:70208088-70217386:+|nuORF;nc|ENSG00000140839|Q6UXF7|CLEC18B;nc|ENSG00000157335|Q8NCF0-2|CLEC18C	40.5726180659479	0.4135428067754104	6				NaN	NaN	0	NaN	10587	3726	14311
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14316	36.764	NaN	1168.5	30	0	343.96	0.106				-1	LVHNIGIFMR	10	43	405.89328113616494	NaN	0	405.5594177246094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_LVHNIGIFM(Oxidation (M))R_	TMEM106C|p.V215G|1|0.15|ENSG00000134291|chr12:47967249-47967249|T/G|missense_variant	32.75053402867276	0.3926392905881664	6				NaN	NaN	0	NaN	10588	3726	14311
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14317	36.765	NaN	1906.4	30	0	152.82	0.035	+			51187	YPIEIKEE	8	62	510.7641954679315	1019.513838002663	2	510.764892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YPIEIKEE_	ENSG00000162843|ENST00000437684|WDR64;nc|ENSG00000162843|B1ANS9-2|WDR64;nc|ENSG00000162843|B1ANS9|WDR64;WDR64|p.L1065*|1|0.34|ENSG00000162843|chr1:241801161-241801161|T/-|frameshift_variant	58.78195531508484	0.5138399468736706	6				NaN	NaN	0	NaN	10589	3726	14311
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14318	36.766	NaN	1620.7	30	0	211.18	0.138				-1	EGMILLNT	8	52	453.7339412371691	905.4533295411383	2	453.73394775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_EGM(Oxidation (M))ILLNT_	ENSG00000162391|ENST00000302250|FAM151A;FAM151A|p.R534Gfs*18|1|0.3|ENSG00000162391|chr1:54609426-54609426|G/-|frameshift_variant	45.9519527083369	0.6193794311207887	6				NaN	NaN	0	NaN	10590	3726	14311
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14336	36.805	NaN	6702.8	30	0	788.61	0.214	+			36446	SEVELMKV	8	65	467.74895416695165	933.4833554007033	2	467.74871826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEVELMKV_	ENSG00000115758|ENST00000234111|ODC1	129.68262048586715	0.2207121622506348	6				NaN	NaN	0	NaN	10605	3729	14335
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14337	36.809	NaN	7309.2	30	0	2826.1	0.106	+			44070	TPSQPLPTY	9	58	502.2585003495495	1002.502447765899	2	502.2580871582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TPSQPLPTY_	ENSG00000173821|ENST00000582970|RNF213;nc|ENSG00000173821|Q63HN8-4|RNF213;nc|ENSG00000173821|Q63HN8|RNF213;RNF213|p.C5022Lfs*7|1|0.3|ENSG00000173821|chr17:80389237-80389237|G/-|frameshift_variant;RNF213|p.P2167Lfs*64|1|0.09|ENSG00000173821|chr17:80344834-80344835|-/T|frameshift_variant;RNF213|p.Q1953Rfs*50|2|0.13|ENSG00000173821|chr17:80340219-80340219|C/-|frameshift_variant	60.11826168202944	0.21262886028301267	6				NaN	NaN	0	NaN	10606	3729	14335
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14338	36.811	NaN	3130.7	30	0	328.75	0.106	+			50684	YEEKISVL	8	62	490.768717889137	979.522882845074	2	490.76885986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YEEKISVL_	ENSG00000144674|ENST00000361924|GOLGA4;GOLGA4|p.N1805Kfs*18|1|0.11|ENSG00000144674|chr3:37327293-37327294|-/A|frameshift_variant;GOLGA4|p.N1805Tfs*6|1|0.38|ENSG00000144674|chr3:37327294-37327294|A/-|frameshift_variant;nc|ENSG00000144674|Q13439-3|GOLGA4;nc|ENSG00000144674|Q13439-4|GOLGA4;nc|ENSG00000144674|Q13439-5|GOLGA4	60.11826168202944	0.5006107059937851	6				NaN	NaN	0	NaN	10607	3729	14335
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14339	36.813	NaN	1854.9	30	0	112.34	0.106			+	10056	ESFSKVVIH	9	60	523.2880657475752	1044.5615785619502	2	523.2882690429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ESFSKVVIH_	REV__MAP9|p.D123H|1|0.38|ENSG00000164114|chr4:155373250-155373250|C/G|missense_variant	35.61828744233558	0.47037581924408073	6				NaN	NaN	0	NaN	10608	3729	14335
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14340	36.815	NaN	1491.2	30	0	762.18	0.106	+			5975	AVLPRFGVNL	10	35	362.55349315157423	1084.6386500549227	3	362.5535583496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVLPRFGVNL_	ENST00000416202.5_1_22:46452749-46452818:+|nuORF	24.519189625965996	0.6795976720565101	6				NaN	NaN	0	NaN	10609	3729	14335
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14341	36.816	NaN	1465.6	30	0	126.55	0.033	+			36282	SEPVTPASL	9	59	450.73703049130114	NaN	0	450.7823486328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SEPVTPASL_	ENSG00000056097|ENST00000265069|ZFR	51.33545320467046	0.19748963086191895	6				NaN	NaN	0	NaN	10610	3729	14335
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14342	36.817	NaN	1217.6	30	0	244.97	0.14				-1	CCSLGRAWG	9	54	505.2187302936663	NaN	0	505.21820068359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_C(Carbamidomethyl (C))CSLGRAWG_	ENSG00000142449|ENST00000600128|FBN3;FBN3|p.G1577Vfs*72|2|0.29|ENSG00000142449|chr19:8106191-8106191|C/-|frameshift_variant;FBN3|p.G2797Afs*4|1|0.38|ENSG00000142449|chr19:8065959-8065959|C/-|frameshift_variant;FBN3|p.P1958Lfs*128|1|0.24|ENSG00000142449|chr19:8094478-8094478|G/-|frameshift_variant;FBN3|p.T2578Pfs*120|1|0.39|ENSG00000142449|chr19:8073269-8073269|G/-|frameshift_variant	31.954861631926434	0.3162336699109506	6				NaN	NaN	0	NaN	10611	3729	14335
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14360	36.856	NaN	31970	30	0	6800.6	0.214			+	46457	VESSMRSR	8	74	476.23776295121246	950.4609729692249	2	476.2376708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VESSMRSR_	REV__ENST00000358127.8_1_9:36839512-36839866:-|nuORF	65.80317337860623	0.44433089765398776	6				NaN	NaN	0	NaN	10626	3732	14359
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14361	36.86	NaN	11627	30	0	4612.8	0.106	+			4888	ATQDILKALSK	11	58	396.57157537564746	1186.6928967271424	3	396.5712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATQDILKALSK_	ENSG00000085276|ENST00000651503|MECOM;MECOM|p.G611Efs*33|1|0.39|ENSG00000085276|chr3:169115476-169115476|C/-|frameshift_variant;MECOM|p.G614Efs*30|5|0.4|ENSG00000085276|chr3:169115469-169115469|T/-|frameshift_variant;MECOM|p.P513Qfs*15|2|0.39|ENSG00000085276|chr3:169115772-169115772|A/-|frameshift_variant;MECOM|p.S389Rfs*46|1|0.33|ENSG00000085276|chr3:169116140-169116143|CTGA/-|frameshift_variant;MECOM|p.V498Sfs*27|1|0.34|ENSG00000085276|chr3:169115816-169115817|-/T|frameshift_variant;nc|ENSG00000085276|Q03112-1|MECOM;nc|ENSG00000085276|Q03112-4|MECOM;nc|ENSG00000085276|Q03112-5|MECOM;nc|ENSG00000085276|Q03112-6|MECOM;nc|ENSG00000085276|Q03112-8|MECOM;nc|ENSG00000085276|Q03112|MECOM	41.080066990542036	0.5431644350485484	6				NaN	NaN	0	NaN	10627	3732	14359
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14362	36.862	NaN	3044.7	30	0	721.4	0.106			+	24680	LGYHRGWA	8	44	480.24682625006955	958.4790995669391	2	480.2463684082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LGYHRGWA_	REV__ABCF3|p.R205H|1|0.29|ENSG00000161204|chr3:184188185-184188185|G/A|missense_variant	46.76643321282427	0.6143254112625767	6				NaN	NaN	0	NaN	10628	3732	14359
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14363	36.864	NaN	3261.1	30	0	309.23	0.106			+	24382	LFSTVQII	8	62	460.77629121449473	919.5380294957895	2	460.7762451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LFSTVQII_	REV__ENSG00000132911|ENST00000255262|NMUR2;REV__NMUR2|p.F224L|1|0.5|ENSG00000132911|chr5:152404442-152404442|G/T|missense_variant;REV__NMUR2|p.F224V|1|0.05|ENSG00000132911|chr5:152404444-152404444|A/C|missense_variant;REV__NMUR2|p.L330Efs*27|1|0.05|ENSG00000132911|chr5:152392451-152392452|-/CCCTCTC|frameshift_variant	82.30502934623384	0.30436709589983096	6				NaN	NaN	0	NaN	10629	3732	14359
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14364	36.865	NaN	2076.8	30	0	371.45	0.106			+	-1	SVQGGACR	8	47	417.69865030749236	833.3827476817847	2	417.6984558105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_SVQGGAC(Carbamidomethyl (C))R_	REV__ENST00000583693.5_1_17:79974628-79975195:+|nuORF	18.324413293986947	0.7971860551947066	6				NaN	NaN	0	NaN	10630	3732	14359
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14365	36.867	NaN	4713.4	30	0	1592.4	0.035			+	33917	RRTLPVPF	8	64	493.30046339877845	984.5863738643569	2	493.2999572753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RRTLPVPF_	REV__ENSG00000137218|ENST00000373018|FRS3	52.29916861842294	0.578018602984656	6				NaN	NaN	0	NaN	10631	3732	14359
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14366	36.868	NaN	2187.8	30	0	444.54	0.144			+	19106	IYKKFSLEL	9	46	380.89340354439287	NaN	0	380.8932189941406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IYKKFSLEL_	REV__ENST00000296220.5_1_3:125248682-125248751:-|nuORF	44.116797842482775	0.2472372736944149	6				NaN	NaN	0	NaN	10632	3732	14359
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14384	36.907	NaN	15961	30	0	4504.6	0.214	+			41689	SVSDIIVVAK	10	66	515.8108795051251	1029.60720607705	2	515.81103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSDIIVVAK_	ENSG00000006042|ENST00000579849|TMEM98;ENST00000583120.1_1_17:31258522-31263466:+|nuORF	136.5150327860613	0.011683253857074924	6				NaN	NaN	0	NaN	10647	3735	14383
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14385	36.911	NaN	6252.7	30	0	2045.1	0.106	+			46701	VGLGLGVG	8	39	336.20795590159844	670.4013588699969	2	336.2080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VGLGLGVG_	ENST00000409419.5_1_19:40854631-40872336:+|nuORF;ENST00000409587.5_1_19:40854631-40871796:+|nuORF;ENST00000594085.5_1_19:40854631-40871460:+|nuORF	80.99701575658668	0.31526608040172566	6				NaN	NaN	0	NaN	10648	3735	14383
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14386	36.913	NaN	3674.3	30	0	734.97	0.106	+			23698	LATKDPPSM	9	55	480.24682625006955	958.4790995669391	2	480.2465515136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LATKDPPSM_	ENSG00000164530|ENST00000373674|PI16	37.15910966729921	0.4535818937225704	6				NaN	NaN	0	NaN	10649	3735	14383
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14387	36.915	NaN	2431.3	30	0	301.11	0.106	+			45607	TYPDVNNSI	9	62	511.7429671819558	1021.4713814307116	2	511.74346923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TYPDVNNSI_	ENSG00000122958|ENST00000263559|VPS26A;nc|ENSG00000122958|O75436-2|VPS26A	70.8162118820467	0.13725933411854815	6				NaN	NaN	0	NaN	10650	3735	14383
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14388	36.917	NaN	2657.9	30	0	872.11	0.106	+			36581	SFTLFLLLAP	10	34	374.5568422903082	1120.6486974711247	3	374.5566711425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SFTLFLLLAP_	ENSG00000023041|ENST00000369405|ZDHHC6;nc|ENSG00000023041|Q9H6R6-2|ZDHHC6	30.317721548370564	0.6322445173429027	6				NaN	NaN	0	NaN	10651	3735	14383
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14389	36.918	NaN	1945.5	30	0	142.99	0.035	+			11596	FPSAKDPTW	9	69	524.7585746696813	1047.5025964061624	2	524.7590942382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FPSAKDPTW_	ENSG00000042445|ENST00000295802|RETSAT;nc|ENSG00000042445|Q6NUM9-2|RETSAT	46.45678178249821	0.34452392205506005	6				NaN	NaN	0	NaN	10652	3735	14383
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14390	36.919	NaN	2125.5	30	0	711.32	0.139	+			14170	GSPKVPRAR	9	50	484.2942996646067	NaN	0	484.7629089355469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GSPKVPRAR_	ENSG00000173210|ENST00000309868|ABLIM3;nc|ENSG00000173210|O94929-2|ABLIM3;nc|ENSG00000173210|O94929-3|ABLIM3	19.996771675451527	0.3693019437812985	6				NaN	NaN	0	NaN	10653	3735	14383
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14408	36.958	NaN	3811.8	30	0	401.32	0.214			+	37640	SLQLLNVV	8	52	443.2738422432025	884.5331315532051	2	443.2735595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLQLLNVV_	REV__ATM|p.C1838Vfs*8|1|0.42|ENSG00000149311|chr11:108304687-108304687|T/-|frameshift_variant;REV__ATM|p.G2425Vfs*15|1|0.33|ENSG00000149311|chr11:108329204-108329204|G/-|frameshift_variant;REV__ATM|p.K2303Rfs*7|2|0.24|ENSG00000149311|chr11:108326153-108326153|A/-|frameshift_variant;REV__ATM|p.K2413Tfs*11|1|0.06|ENSG00000149311|chr11:108329168-108329169|-/CAACCAATTTAAATTAT|frameshift_variant;REV__ATM|p.K2811Sfs*46|1|0.34|ENSG00000149311|chr11:108345750-108345750|A/-|frameshift_variant;REV__ATM|p.L2231Wfs*4|1|0.52|ENSG00000149311|chr11:108325426-108325426|T/-|frameshift_variant;REV__ATM|p.R1973Efs*17|1|0.26|ENSG00000149311|chr11:108310311-108310311|A/-|frameshift_variant;REV__ENSG00000149311|ENST00000675843|ATM;REV__ENST00000524792.5_1_11:108158320-108236232:+|nuORF	76.7741389293348	0.3504530765139327	6				NaN	NaN	0	NaN	10668	3738	14407
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14409	36.962	NaN	4164.4	30	0	313.94	0.106	+			16516	HEVEKMFTL	9	73	567.2866542698993	1132.5587556065984	2	567.2874145507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HEVEKMFTL_	ENSG00000139719|ENST00000267199|VPS33A;ENST00000544349.5_1_12:122735394-122750988:-|nuORF;VPS33A|p.F371Lfs*4|1|0.18|ENSG00000139719|chr12:122239929-122239929|A/-|frameshift_variant;VPS33A|p.F82Lfs*6|1|0.44|ENSG00000139719|chr12:122263622-122263622|A/-|frameshift_variant;VPS33A|p.G459Afs*86|7|0.14|ENSG00000139719|chr12:122235850-122235850|C/-|frameshift_variant;VPS33A|p.G552Afs*2|1|0.26|ENSG00000139719|chr12:122232382-122232382|C/-|frameshift_variant;VPS33A|p.R460Qfs*17|2|0.28|ENSG00000139719|chr12:122235849-122235850|-/C|frameshift_variant	80.45461616416974	0.09558281504443908	6				NaN	NaN	0	NaN	10669	3738	14407
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14410	36.964	NaN	1770.4	30	0	248.89	0.106				-1	DDLISDSSSM	10	65	543.2172371725716	1084.419921411943	2	543.2177124023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_DDLISDSSSM(Oxidation (M))_	ENSG00000234602|ENST00000513312|MCIDAS	40.77816245573522	0.5419747034533848	6				NaN	NaN	0	NaN	10670	3738	14407
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14411	36.966	NaN	1619.8	30	0	178.28	0.106			+	26298	LSVEKGLP	8	49	421.75274245234345	841.4909319714869	2	421.7522888183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSVEKGLP_	REV__ENSG00000182168|ENST00000453304|UNC5C;REV__nc|ENSG00000182168|O95185-2|UNC5C;REV__UNC5C|p.Q860Rfs*14|1|0.28|ENSG00000182168|chr4:95170206-95170206|G/-|frameshift_variant	76.84663266511073	0.3498490246073164	6				NaN	NaN	0	NaN	10671	3738	14407
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14412	36.967	NaN	1557.6	30	0	226.93	0.038	+			22082	KSLNLEMQEL	10	42	402.21253533123286	NaN	0	402.2122497558594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KSLNLEMQEL_	ENSG00000138759|ENST00000512123|FRAS1;nc|ENSG00000138759|Q86XX4|FRAS1	30.568863376406313	0.39980281766270914	6				NaN	NaN	0	NaN	10672	3738	14407
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14430	37.004	NaN	9750.1	30	0	2146.4	0.214				-1	SISVLLVAC	9	69	481.2730081321139	960.5314633310278	2	481.2734680175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SISVLLVAC(Carbamidomethyl (C))_	ENSG00000105983|ENST00000353442|LMBR1;nc|ENSG00000105983|Q8WVP7-3|LMBR1	57.81127852772723	0.2318599694398087	6				NaN	NaN	0	NaN	10687	3741	14429
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14431	37.007	NaN	2645.6	30	0	455.56	0.106	+			36946	SILNNPIVK	9	58	499.3058422539788	996.5971315747577	2	499.30535888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SILNNPIVK_	ENSG00000162664|ENST00000340281|ZNF326;ENST00000394583.7_1_1:90470639-90493257:+|nuORF;nc|ENSG00000162664|Q5BKZ1-3|ZNF326;ZNF326|p.A460V|1|0.18|ENSG00000162664|chr1:90022323-90022323|C/T|missense_variant	79.48907831485694	0.09975780661107167	6				NaN	NaN	0	NaN	10688	3741	14429
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14432	37.01	NaN	1672	30	0	189.67	0.106	+			21667	KQALKYFNL	9	67	562.826389110394	1123.6382252875878	2	562.8271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KQALKYFNL_	ENSG00000071537|ENST00000336735|SEL1L	35.61828744233558	0.47037581924408073	6				NaN	NaN	0	NaN	10689	3741	14429
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14433	37.011	NaN	1307.8	30	0	133.65	0.106	+			2447	APINEVARF	9	53	508.77978515625	NaN	0	508.77978515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_APINEVARF_	ENSG00000165219|ENST00000297933|GAPVD1;nc|ENSG00000165219|Q14C86-3|GAPVD1;nc|ENSG00000165219|Q14C86-4|GAPVD1;nc|ENSG00000165219|Q14C86-5|GAPVD1;nc|ENSG00000165219|Q14C86-6|GAPVD1;nc|ENSG00000165219|Q14C86|GAPVD1	30.317721548370564	0.32449924987115025	6				NaN	NaN	0	NaN	10690	3741	14429
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14434	37.013	NaN	2104.5	30	0	231.7	0.035			+	51511	YVQWGEKP	8	61	503.7538248276191	1005.4930967220382	2	503.7528381347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YVQWGEKP_	REV__ENSG00000118733|ENST00000370103|OLFM3;REV__nc|ENSG00000118733|Q96PB7-2|OLFM3;REV__nc|ENSG00000118733|Q96PB7-4|OLFM3;REV__nc|ENSG00000118733|Q96PB7|OLFM3	38.80614096846853	0.6637206697844082	6				NaN	NaN	0	NaN	10691	3741	14429
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14452	37.051	NaN	26051	30	0	7880.9	0.214	+			49056	VVINYSIVK	9	81	517.8160513003401	1033.61754966748	2	517.8160400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVINYSIVK_	ENSG00000196405|ENST00000392920|EVL;ENST00000554460.5_1_14:100540857-100568654:+|nuORF;ENST00000556921.1_1_14:100551177-100572452:+|nuORF;ENST00000557637.1_1_14:100531783-100564000:+|nuORF;EVL|p.P188Hfs*41|1|0.18|ENSG00000196405|chr14:100128589-100128590|-/CC|frameshift_variant;nc|ENSG00000196405|Q9UI08-3|EVL;nc|ENSG00000196405|Q9UI08-4|EVL;nc|ENSG00000196405|Q9UI08-5|EVL;nc|ENSG00000196405|Q9UI08|EVL	146.78539889680295	0.007618400906539062	6				NaN	NaN	0	NaN	10706	3744	14451
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14453	37.054	NaN	4668.8	30	0	443.63	0.106	+			30742	QDLLALVR	8	68	464.28464729518265	926.5547416571653	2	464.28436279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QDLLALVR_	ENSG00000164944|ENST00000297591|VIRMA;ENST00000521080.5_1_8:95511544-95524374:-|nuORF;nc|ENSG00000164944|Q69YN4-2|VIRMA;nc|ENSG00000164944|Q69YN4-3|VIRMA	56.72105179125745	0.5342425954139568	6				NaN	NaN	0	NaN	10707	3744	14451
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14454	37.056	NaN	1479.6	30	0	205.68	0.106	+			5649	AVDEAADALLK	11	50	558.3004811585438	1114.5864093838875	2	558.3009033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVDEAADALLK_	ENSG00000132305|ENST00000410111|IMMT;ENST00000409258.2_1_2:86386442-86398424:-|nuORF;ENST00000474969.5_1_2:86385703-86422514:-|nuORF;ENST00000490238.5_1_2:86389097-86393741:-|nuORF;nc|ENSG00000132305|Q16891-2|IMMT;nc|ENSG00000132305|Q16891-3|IMMT;nc|ENSG00000132305|Q16891-4|IMMT	51.72707519102574	0.3974808554116684	6				NaN	NaN	0	NaN	10708	3744	14451
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14455	37.058	NaN	962.3	30	0	55.856	0.033	+			13182	GIAGILKW	8	47	429.26678466796875	NaN	0	429.26678466796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GIAGILKW_	ENSG00000085377|ENST00000652536|PREP;PREP|p.G459Rfs*58|1|0.25|ENSG00000085377|chr6:105288837-105288838|-/T|frameshift_variant;PREP|p.L670Cfs*20|1|0.16|ENSG00000085377|chr6:105278269-105278269|G/-|frameshift_variant	29.841539824830324	1.7418937515398478	6				NaN	NaN	0	NaN	10709	3744	14451
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14473	37.096	NaN	11712	30	0	2633.7	0.214	+			5062	ATSIPAILK	9	62	457.2894720046604	912.5643910761208	2	457.289306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSIPAILK_	ENSG00000110107|ENST00000227524|PRPF19;PRPF19|p.S440Hfs*2|1|0.3|ENSG00000110107|chr11:60897945-60897945|A/-|frameshift_variant	54.776311868738084	0.25715957988447635	6				NaN	NaN	0	NaN	10724	3747	14472
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14474	37.099	NaN	7762.9	30	0	2054.6	0.106	+			6035	AVMGAYVLLK	10	70	540.8097182906607	1079.6048836481214	2	540.8106079101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_AVM(Oxidation (M))GAYVLLK_	ENSG00000166562|ENST00000587834|SEC11C;ENST00000591406.1_1_18:56822908-56825914:+|nuORF	106.41520541750704	0.05864542590786676	6				NaN	NaN	0	NaN	10725	3747	14472
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14475	37.102	NaN	9860.6	30	0	2216.1	0.106			+	41120	SVISKPITV	9	68	472.29480565499495	942.5750583767899	2	472.2944641113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVISKPITV_	REV__ENSG00000198452|ENST00000641545|OR14L1P;REV__ENST00000419087.1_1_1:247782982-247783861:+|nuORF	47.657333605630114	0.33044192980041115	6				NaN	NaN	0	NaN	10726	3747	14472
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14476	37.103	NaN	2004	30	0	302.62	0.106				-1	VDKMYLNI	8	57	506.2640322162155	1010.5135114992311	2	508.2694091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_VDKM(Oxidation (M))YLNI_	CEP162|p.K1098Rfs*20|1|0.46|ENSG00000135315|chr6:84152881-84152881|T/-|frameshift_variant;CEP162|p.N1181Mfs*3|2|0.21|ENSG00000135315|chr6:84152632-84152632|T/-|frameshift_variant;CEP162|p.Q686Tfs*11|1|0.39|ENSG00000135315|chr6:84174158-84174159|-/T|frameshift_variant;CEP162|p.R1099Efs*46|2|0.27|ENSG00000135315|chr6:84152880-84152881|-/T|frameshift_variant;ENSG00000135315|ENST00000403245|CEP162;ENST00000497936.5_1_6:84884653-84936120:-|nuORF;nc|ENSG00000135315|Q5TB80-2|CEP162	30.503639358989545	0.7238069182250283	6				NaN	NaN	0	NaN	10727	3747	14472
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14477	37.105	NaN	2394.2	30	0	536.97	0.106	+			31303	QIINITMTK	9	58	531.3047873554882	1060.5950217777763	2	531.3050537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QIINITMTK_	ENSG00000137497|ENST00000393695|NUMA1;ENST00000540626.5_1_11:71714575-71718510:-|nuORF;nc|ENSG00000137497|Q14980-2|NUMA1;nc|ENSG00000137497|Q14980-5|NUMA1	35.15202426646627	0.4747332964206883	6				NaN	NaN	0	NaN	10728	3747	14472
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14478	37.107	NaN	3012	30	0	994.16	0.036	+			29116	NTSDFVYLK	9	62	543.7774081326277	1085.5402633320552	2	543.7780151367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NTSDFVYLK_	ENSG00000075711|ENST00000667157|DLG1;ENST00000471733.5_1_3:196807912-197024075:-|nuORF;nc|ENSG00000075711|Q12959-2|DLG1;nc|ENSG00000075711|Q12959-3|DLG1;nc|ENSG00000075711|Q12959-5|DLG1;nc|ENSG00000075711|Q12959-6|DLG1;nc|ENSG00000075711|Q12959-7|DLG1;nc|ENSG00000075711|Q12959-8|DLG1;nc|ENSG00000075711|Q12959-9|DLG1;nc|ENSG00000075711|Q12959|DLG1	70.8162118820467	0.13725933411854815	6				NaN	NaN	0	NaN	10729	3747	14472
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14479	37.108	NaN	1816.1	30	0	315.54	0.139	+			49329	VVSELKIPV	9	52	492.31024049740194	NaN	0	492.31024169921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VVSELKIPV_	ENST00000377791.3_1_6:26138939-26139047:+|nuORF	42.396135135203025	0.2590952873412954	6				NaN	NaN	0	NaN	10730	3747	14472
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14497	37.147	NaN	8638.2	30	0	1038.4	0.214	+			11836	FSVTGRVL	8	61	439.75844178215686	877.5023306311138	2	439.758056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FSVTGRVL_	ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;nc|ENSG00000185164|Q5JPE7-3|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2;NOMO1|p.P1102Hfs*42|1|0.36|ENSG00000103512|chr16:14886838-14886838|C/-|frameshift_variant	64.20726635412375	0.4601301477144759	6				NaN	NaN	0	NaN	10745	3750	14496
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14498	37.151	NaN	4002.3	30	0	390.42	0.106	+			28031	NAAEIKLTM	9	62	495.7683851471906	989.5222173611812	2	495.7680969238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NAAEIKLTM_	ENSG00000174780|ENST00000642900|SRP72;ENST00000580060.1_1_18:47022337-47022472:-|nuORF;nc|ENSG00000174780|O76094-2|SRP72	78.26377905018397	0.10505600812668463	6				NaN	NaN	0	NaN	10746	3750	14496
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14499	37.153	NaN	4861.8	30	0	782.8	0.106			+	10851	FATGWIFA	8	62	456.7340089629544	911.4534649927089	2	456.7336730957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FATGWIFA_	REV__tr|U7STG7|U7STG7_FUSNUEamAdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01403PE=4SV=1	57.452649787351945	0.526999880452039	6				NaN	NaN	0	NaN	10747	3750	14496
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14500	37.154	NaN	4934.4	30	0	440.75	0.106	+			5619	AVCMFLASK	9	65	513.7590211416602	1025.5034893501204	2	513.7591552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_AVC(Carbamidomethyl (C))MFLASK_	ENSG00000118971|ENST00000261254|CCND2;nc|ENSG00000118971|P30279-2|CCND2	60.11826168202944	0.21262886028301267	6				NaN	NaN	0	NaN	10748	3750	14496
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14501	37.156	NaN	16719	30	0	3103.5	0.106	+			6787	CFLSTLLSQ	9	75	506.2640322162155	1010.5135114992311	2	506.2642517089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_CFLSTLLSQ_	ALPK2|p.G256Vfs*6|1|0.03|ENSG00000198796|chr18:58580011-58580012|-/AACC|frameshift_variant;ALPK2|p.K523Rfs*15|6|0.3|ENSG00000198796|chr18:58579208-58579208|T/-|frameshift_variant;ALPK2|p.L356Yfs*2|3|0.3|ENSG00000198796|chr18:58579709-58579709|A/-|frameshift_variant;ENSG00000198796|ENST00000361673|ALPK2	112.41091882917199	0.026537921851008135	6				NaN	NaN	0	NaN	10749	3750	14496
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14502	37.158	NaN	1870.7	30	0	248.51	0.035			+	25195	LMHMQLKF	8	62	524.2771567593328	1046.5397605854655	2	524.2772216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LMHMQLKF_	REV__ENSG00000157600|ENST00000372068|TMEM164	52.29916861842294	0.578018602984656	6				NaN	NaN	0	NaN	10750	3750	14496
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14503	37.159	NaN	1907.7	30	0	182.3	0.139	+			28250	NDIVISKL	8	49	451.27050910188495	NaN	0	451.2704772949219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NDIVISKL_	ENSG00000113141|ENST00000417647|IK	85.86182877749512	1.7418937515398478	6				NaN	NaN	0	NaN	10751	3750	14496
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14521	37.196	NaN	3368.7	30	0	638.3	0.214	+			48612	VTSAFLLAK	9	65	475.28942881380857	948.5643046944172	2	475.2891540527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTSAFLLAK_	ENSG00000010270|ENST00000009041|STARD3NL;nc|ENSG00000010270|O95772-2|STARD3NL	74.25504064058377	0.12238981753128622	6				NaN	NaN	0	NaN	10766	3753	14520
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14522	37.2	NaN	2344.6	30	0	353.99	0.106	+			28066	NAATIKDVF	9	58	489.7663872693364	977.5182216054728	2	489.76611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NAATIKDVF_	ENSG00000005700|ENST00000306270|IBTK;ENST00000369751.2_1_6:82901346-82950269:-|nuORF;ENST00000505222.5_1_6:82901346-82950269:-|nuORF;IBTK|p.F642Vfs*29|1|0.2|ENSG00000005700|chr6:82214507-82214508|-/C|frameshift_variant;IBTK|p.K1213Sfs*50|1|0.13|ENSG00000005700|chr6:82181966-82181966|T/-|frameshift_variant;IBTK|p.M1160*|1|0.13|ENSG00000005700|chr6:82191170-82191170|T/-|frameshift_variant;IBTK|p.Q590Sfs*9|1|0.41|ENSG00000005700|chr6:82214663-82214664|-/A|frameshift_variant;IBTK|p.Y96Mfs*11|1|0.09|ENSG00000005700|chr6:82240201-82240201|A/-|frameshift_variant;nc|ENSG00000005700|Q9P2D0-2|IBTK	88.17693792209575	0.07000514020414955	6				NaN	NaN	0	NaN	10767	3753	14520
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14523	37.202	NaN	3916.4	30	0	1193.4	0.106	+			32272	QTLSTQLWK	9	61	552.8041923627532	1103.5938317923062	2	552.8068237304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QTLSTQLWK_	ENSG00000112305|ENST00000370455|SMAP1;nc|ENSG00000112305|Q8IYB5-2|SMAP1	63.42647028704847	0.1850514934184437	6				NaN	NaN	0	NaN	10768	3753	14520
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14524	37.204	NaN	1209.5	30	0	271.93	0.106				-1	 	0	37	379.7253609766168	757.4361690200336	2	379.72515869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10769	3753	14520
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14525	37.206	NaN	2340.8	30	0	142.65	0.106	+			27675	MPTTGINEY	9	64	513.2340698242188	NaN	0	513.2340698242188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MPTTGINEY_	ENSG00000060558|ENST00000262958|GNA15	39.252832667884924	0.27938773122138094	6				NaN	NaN	0	NaN	10770	3753	14520
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14526	37.207	NaN	1398.4	30	0	219.03	0.106			+	26326	LSVYFSKL	8	55	478.7739358572239	NaN	0	478.7738952636719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSVYFSKL_	REV__ENST00000272462.2_1_2:110841508-110841715:-|nuORF	42.396135135203025	1.7418937515398478	6				NaN	NaN	0	NaN	10771	3753	14520
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14527	37.209	NaN	5485	30	0	963.81	0.035	+			44970	TVCDLVLGK	9	63	502.7757484294856	1003.5369439257712	2	502.775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_TVC(Carbamidomethyl (C))DLVLGK_	ENST00000482547.1_1_10:131265539-131334642:+|nuORF;ENST00000482653.1_1_10:131265539-131362121:+|nuORF	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	10772	3753	14520
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14546	37.245	NaN	11320	30	0	3217.6	0.214	+			41215	SVLEGVLSK	9	58	466.2764936570152	930.5384343808304	2	466.2762451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVLEGVLSK_	CADPS2|p.N1185Tfs*15|1|0.4|ENSG00000081803|chr7:122345632-122345632|T/-|frameshift_variant;ENSG00000081803|ENST00000449022|CADPS2;nc|ENSG00000081803|Q86UW7-2|CADPS2;nc|ENSG00000081803|Q86UW7-3|CADPS2	131.61620852596164	0.014413238321579053	6				NaN	NaN	0	NaN	10788	3756	14545
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14547	37.249	NaN	4818.8	30	0	369.44	0.106			+	24352	LFLTSNLL	8	67	460.77629121449473	919.5380294957895	2	460.776123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LFLTSNLL_	REV__ENSG00000155256|ENST00000684270|ZFYVE27;REV__nc|ENSG00000155256|Q5T4F4-2|ZFYVE27;REV__nc|ENSG00000155256|Q5T4F4-3|ZFYVE27;REV__nc|ENSG00000155256|Q5T4F4-4|ZFYVE27;REV__nc|ENSG00000155256|Q5T4F4-5|ZFYVE27;REV__nc|ENSG00000155256|Q5T4F4-6|ZFYVE27;REV__nc|ENSG00000155256|Q5T4F4-7|ZFYVE27;REV__nc|ENSG00000155256|Q5T4F4-8|ZFYVE27;REV__ZFYVE27|p.K254Efs*26|1|0.39|ENSG00000155256|chr10:97750419-97750420|-/G|frameshift_variant	71.29570347882199	0.39610197767395533	6				NaN	NaN	0	NaN	10789	3756	14545
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14548	37.251	NaN	2579.4	30	0	973.45	0.106	+			32362	QVADSTFTVLK	11	64	604.8296088533742	1207.6446647735484	2	604.8291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QVADSTFTVLK_	ENSG00000050748|ENST00000452135|MAPK9;nc|ENSG00000050748|P45984-2|MAPK9;nc|ENSG00000050748|P45984-3|MAPK9;nc|ENSG00000050748|P45984-4|MAPK9;nc|ENSG00000050748|P45984-5|MAPK9	34.08650109265054	0.6322515996262609	6				NaN	NaN	0	NaN	10790	3756	14545
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14549	37.253	NaN	4857.9	30	0	1475.8	0.106				-1	 	0	49	372.7176124212006	743.4206719092012	2	372.71759033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10791	3756	14545
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14550	37.255	NaN	2802	30	0	282.99	0.106	+			8256	EAGARVWY	8	60	476.23776295121246	950.4609729692249	2	476.2370910644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EAGARVWY_	ENST00000333279.2_1_1:173628559-173638987:-|nuORF	35.200714571348534	0.6875396545722289	6				NaN	NaN	0	NaN	10792	3756	14545
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14551	37.256	NaN	2143.6	30	0	339.07	0.106	+			36947	SILPAALGK	9	43	435.27630916609604	868.5380653989921	2	435.2762756347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SILPAALGK_	ENSG00000157870|ENST00000419916|PRXL2B;ENST00000477045.1_1_1:2518532-2519982:+|nuORF;ENST00000481683.5_1_1:2518487-2520915:+|nuORF;ENST00000484099.5_1_1:2518532-2520863:+|nuORF;ENST00000493183.5_1_1:2517940-2520863:+|nuORF;nc|ENSG00000157870|Q8TBF2-2|PRXL2B;nc|ENSG00000157870|Q8TBF2-3|PRXL2B;nc|ENSG00000157870|Q8TBF2-4|PRXL2B;nc|ENSG00000157870|Q8TBF2-6|PRXL2B;nc|ENSG00000157870|Q8TBF2-7|PRXL2B	35.61828744233558	0.47037581924408073	6				NaN	NaN	0	NaN	10793	3756	14545
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14552	37.258	NaN	1906.6	30	0	251.37	0.037	+			13643	GMMVLSLGIIL	11	64	573.8356267717095	1145.6567006102189	2	573.8358764648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GMMVLSLGIIL_	ENSG00000110077|ENST00000528851|MS4A6A;ENST00000526677.1_1_11:59947162-59947516:-|nuORF;ENST00000529906.5_1_11:59944867-59947426:-|nuORF;ENST00000530179.1_1_11:59945684-59950490:-|nuORF;MS4A6A|p.T185Sfs*29|1|0.24|ENSG00000110077|chr11:60173125-60173126|GT/-|frameshift_variant;nc|ENSG00000110077|Q9H2W1-3|MS4A6A;nc|ENSG00000110077|Q9H2W1-4|MS4A6A;nc|ENSG00000110077|Q9H2W1-5|MS4A6A;nc|ENSG00000110077|Q9H2W1|MS4A6A	31.634271133179894	0.6579734920221648	6				NaN	NaN	0	NaN	10794	3756	14545
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14570	37.296	NaN	2858.2	30	0	353.33	0.214			+	10877	FAYRSDTY	8	59	511.7328853424267	1021.4512177516534	2	511.7330627441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FAYRSDTY_	REV__HERV1_I-int_dup2|chr3:34679996-34686397:+|1.0948245018220069|0.0565463038051543|4.28|448.0|41|1|sense	44.116797842482775	0.6307669463330267	6				NaN	NaN	0	NaN	10809	3759	14569
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14571	37.299	NaN	2237	30	0	253.95	0.106	+			1877	AILNYIASK	9	65	496.7923778255066	991.5702027178132	2	496.7920837402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AILNYIASK_	ENSG00000174156|ENST00000211122|GSTA3;ENSG00000182793|ENST00000370989|GSTA5;ENSG00000243955|ENST00000334575|GSTA1;ENSG00000244067|ENST00000493422|GSTA2	58.22992032128504	0.22837015374068087	6				NaN	NaN	0	NaN	10810	3759	14569
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14572	37.301	NaN	2413.9	30	0	302.29	0.106				-1	KSKMKPLIF	9	66	554.3332813438942	1106.6520097545883	2	554.3339233398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_KSKM(Oxidation (M))KPLIF_	CCDC110|p.I511Nfs*3|1|0.22|ENSG00000168491|chr4:185459055-185459056|-/T|frameshift_variant;CCDC110|p.M707Nfs*9|1|0.48|ENSG00000168491|chr4:185458467-185458468|-/T|frameshift_variant;CCDC110|p.N755Mfs*18|1|0.24|ENSG00000168491|chr4:185458323-185458323|T/-|frameshift_variant;CCDC110|p.T592Hfs*5|1|0.4|ENSG00000168491|chr4:185458813-185458813|T/-|frameshift_variant;ENSG00000168491|ENST00000307588|CCDC110;nc|ENSG00000168491|Q8TBZ0-2|CCDC110	47.657333605630114	0.33044192980041115	6				NaN	NaN	0	NaN	10811	3759	14569
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14573	37.303	NaN	1027.6	30	0	178	0.106	+			177	AALAALALAL	10	46	449.29180541275133	NaN	0	449.29205322265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AALAALALAL_	ENSG00000267221|ENST00000587304|C17orf113	35.200714571348534	0.3845941098745963	6				NaN	NaN	0	NaN	10812	3759	14569
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14574	37.305	NaN	1648.1	30	0	350.49	0.039				-1	MSCDSFPIRR	10	51	634.7947281306864	NaN	0	634.7953491210938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_MSC(Carbamidomethyl (C))DSFPIRR_	ENSG00000105939|ENST00000242351|ZC3HAV1;nc|ENSG00000105939|Q7Z2W4-2|ZC3HAV1;nc|ENSG00000105939|Q7Z2W4-4|ZC3HAV1;nc|ENSG00000105939|Q7Z2W4-5|ZC3HAV1	35.61828744233558	0.3832230071539346	6				NaN	NaN	0	NaN	10813	3759	14569
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14592	37.342	NaN	26218	30	0	5776.6	0.214			+	26367	LTCLTELIK	9	72	545.8123027161782	1089.6100524991564	2	545.812744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_LTC(Carbamidomethyl (C))LTELIK_	REV__ENSG00000158863|ENST00000289921|FHIP2B;REV__ENST00000488968.1_1_8:21953801-21954290:+|nuORF;REV__ENST00000498344.2_1_8:21946698-21954290:+|nuORF	113.41158876095287	0.025516849225023126	6				NaN	NaN	0	NaN	10828	3762	14591
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14593	37.346	NaN	8291.3	30	0	1520.6	0.106	+			23897	LDKATVLL	8	60	436.7763019822784	871.5380510313569	2	436.77618408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LDKATVLL_	ENSG00000150593|ENST00000280154|PDCD4;ENST00000489049.5_1_10:112647518-112650449:+|nuORF;nc|ENSG00000150593|Q53EL6-2|PDCD4	118.74307786436346	0.2363524257139583	6				NaN	NaN	0	NaN	10829	3762	14591
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14594	37.348	NaN	8154.6	30	0	2136.5	0.106			+	-1	GMESKHHLK	9	65	361.5186972907652	NaN	0	361.5185852050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_GM(Oxidation (M))ESKHHLK_	REV__ENSG00000062716|ENST00000262291|VMP1;REV__ENST00000587470.1_1_17:57915560-57917269:+|nuORF;REV__ENST00000588617.1_1_17:57915560-57917269:+|nuORF;REV__ENST00000591782.1_1_17:57915141-57917269:+|nuORF;REV__ENST00000592790.1_1_17:57915560-57915767:+|nuORF;REV__nc|ENSG00000062716|Q96GC9-2|VMP1;REV__TAOK1-VMP1|1|fusion;REV__VMP1|p.R346W|1|0.31|ENSG00000062716|chr17:59838356-59838356|C/T|missense_variant	44.377184641726394	0.24544280798894275	6				NaN	NaN	0	NaN	10830	3762	14591
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14595	37.35	NaN	3415.9	30	0	1940.7	0.106	+			1475	AFLLKFVNS	9	39	346.87182991685773	1037.5936603507732	3	346.8720397949219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AFLLKFVNS_	ENSG00000131620|ENST00000355303|ANO1;nc|ENSG00000131620|Q5XXA6-2|ANO1;nc|ENSG00000131620|Q5XXA6-3|ANO1;nc|ENSG00000131620|Q5XXA6-4|ANO1;nc|ENSG00000131620|Q5XXA6-5|ANO1	23.04248740728303	0.5879033540491928	6				NaN	NaN	0	NaN	10831	3762	14591
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14596	37.351	NaN	2529.7	30	0	324.14	0.106	+			46876	VILSSVIQP	9	60	478.2943171022883	NaN	0	478.29425048828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VILSSVIQP_	ENST00000494718.5_1_X:51637400-51640272:+|nuORF	56.72105179125745	0.16330365735109603	6				NaN	NaN	0	NaN	10832	3762	14591
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14597	37.353	NaN	1225.3	30	0	91.817	0.036			+	23282	KYLRRVNK	8	57	538.839111328125	NaN	0	538.839111328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KYLRRVNK_	REV__ENST00000409339.3_1_7:158486161-158494616:-|nuORF	24.20275056022122	1.7418937515398478	6				NaN	NaN	0	NaN	10833	3762	14591
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14598	37.354	NaN	1479.9	30	0	138.13	0.14	+			11597	FPSAKDPTW	9	58	524.7585746696813	1047.5025964061624	2	524.7591552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FPSAKDPTW_	ENSG00000042445|ENST00000295802|RETSAT;nc|ENSG00000042445|Q6NUM9-2|RETSAT	60.11826168202944	0.21262886028301267	6				NaN	NaN	0	NaN	10834	3762	14591
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14616	37.393	NaN	19376	30	0	3190.7	0.215	+			28434	NEVKIYSL	8	74	483.268749979678	964.522947026156	2	483.2684326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NEVKIYSL_	ENSG00000115761|ENST00000381685|NOL10;ENST00000473087.1_1_2:10822102-10830002:-|nuORF;nc|ENSG00000115761|Q9BSC4-2|NOL10;nc|ENSG00000115761|Q9BSC4-4|NOL10	129.42129120953632	0.22108578470213103	6				NaN	NaN	0	NaN	10849	3765	14615
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14617	37.397	NaN	9926.6	30	0	1802.8	0.106	+			23555	LAKVGIAL	8	58	392.7684343038926	783.5223156745852	2	392.76812744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LAKVGIAL_	ENSG00000089154|ENST00000300648|GCN1	134.11898256796542	0.23640168232941985	6				NaN	NaN	0	NaN	10850	3765	14615
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14618	37.399	NaN	3020.6	30	0	728.75	0.106	+			18900	IVLSAVITK	9	62	472.3128776626384	942.6112023920768	2	472.31280517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IVLSAVITK_	ENSG00000173821|ENST00000582970|RNF213;ENST00000559070.5_1_17:78261823-78310301:+|nuORF;nc|ENSG00000173821|Q63HN8-4|RNF213;nc|ENSG00000173821|Q63HN8|RNF213;RNF213|p.C5022Lfs*7|1|0.3|ENSG00000173821|chr17:80389237-80389237|G/-|frameshift_variant;RNF213|p.P2167Lfs*64|1|0.09|ENSG00000173821|chr17:80344834-80344835|-/T|frameshift_variant;RNF213|p.Q1953Rfs*50|2|0.13|ENSG00000173821|chr17:80340219-80340219|C/-|frameshift_variant	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	10851	3765	14615
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14619	37.401	NaN	3988.6	30	0	1575.2	0.106	+			37372	SLFQVITY	8	55	485.76433562679716	969.5141183203943	2	486.268798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLFQVITY_	ENST00000206595.10_1_14:31062768-31066635:+|nuORF	31.954861631926434	0.7126016770032289	6				NaN	NaN	0	NaN	10852	3765	14615
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14620	37.402	NaN	3061.4	30	0	470.44	0.106			+	32047	QRSNEDEEEEY	11	56	476.52499217073347	1426.5531471124004	3	476.52447509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QRSNEDEEEEY_	REV__ENSG00000161526|ENST00000584667|SAP30BP;REV__ENST00000577292.5_1_17:73663452-73698652:+|nuORF;REV__ENST00000578354.5_1_17:73663452-73687593:+|nuORF;REV__ENST00000584861.5_1_17:73663452-73668036:+|nuORF;REV__nc|ENSG00000161526|Q9UHR5-2|SAP30BP	18.531049691330335	0.7837198200183355	6				NaN	NaN	0	NaN	10853	3765	14615
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14621	37.404	NaN	2689.5	30	0	502.06	0.035			+	-1	MKLLGPLPM	9	60	508.28755117204565	1014.5605494108913	2	508.2877197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_MKLLGPLPM(Oxidation (M))_	REV__ENST00000512061.5_1_5:16741933-16741987:-|nuORF	30.503639358989545	0.5181749237905803	6				NaN	NaN	0	NaN	10854	3765	14615
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14622	37.405	NaN	20363	30	0	12024	0.14	+			31294	QIFNGTFVK	9	63	527.2900557933534	1052.5655586535067	2	527.2901611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QIFNGTFVK_	ENSG00000147604|ENST00000352983|RPL7;ENST00000397636.2_1_7:99737498-99738123:-|nuORF;ENST00000461190.1_1_3:123871117-123871351:-|nuORF;ENST00000600588.1_1_19:6593418-6593715:+|nuORF	69.6276240434122	0.14239879520340665	6				NaN	NaN	0	NaN	10855	3765	14615
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14640	37.443	NaN	6662.9	30	0	1248.6	0.214	+			50523	YAPSGNFV	8	50	427.7059313907311	853.3973098482622	2	427.7056579589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YAPSGNFV_	ENSG00000111664|ENST00000229264|GNB3;ENSG00000172354|ENST00000303210|GNB2;ENST00000470354.1_1_7:100275135-100275402:+|nuORF;nc|ENSG00000111664|P16520-2|GNB3;nc|ENSG00000172354|P62879-2|GNB2	90.77665401227738	0.27511901818546464	6				NaN	NaN	0	NaN	10870	3768	14639
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14641	37.447	NaN	2594.7	30	0	461.69	0.106	+			44391	TSLKFFLNK	9	64	549.321468377376	1096.628383821552	2	549.32177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TSLKFFLNK_	ENSG00000164292|ENST00000379982|RHOBTB3;RHOBTB3|p.K539Rfs*53|1|0.25|ENSG00000164292|chr5:95783952-95783952|A/-|frameshift_variant	58.2462437865262	0.22823408064396822	6				NaN	NaN	0	NaN	10871	3768	14639
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14642	37.449	NaN	10180	30	0	1284.5	0.106	+			37558	SLMHSFILK	9	65	538.3020036917857	1074.5894544503712	2	538.8037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLMHSFILK_	ENSG00000125971|ENST00000357156|DYNLRB1;ENST00000480759.1_1_20:33117938-33128425:+|nuORF	104.0567914643314	0.03506238181059741	6				NaN	NaN	0	NaN	10872	3768	14639
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14643	37.451	NaN	8333.1	30	0	2503.8	0.106	+			30636	QASSQTLTL	9	70	474.7534748690961	947.4923968049923	2	474.7532043457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QASSQTLTL_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	78.26377905018397	0.10505600812668463	6				NaN	NaN	0	NaN	10873	3768	14639
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14644	37.453	NaN	5733.6	30	0	1641.6	0.106	+			18245	IPAAVKLTY	9	68	488.2973160807266	974.5800792282532	2	488.29638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IPAAVKLTY_	ENSG00000104517|ENST00000520539|UBR5;nc|ENSG00000104517|O95071-2|UBR5;UBR5|p.E2121Kfs*28|1|0.39|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant;UBR5|p.E2121Rfs*13|1|0.28|ENSG00000104517|chr8:102277120-102277121|-/T|frameshift_variant;UBR5|p.F2571Lfs*4|2|0.31|ENSG00000104517|chr8:102262044-102262044|A/-|frameshift_variant;UBR5|p.K2120Rfs*13|1|0.24|ENSG00000104517|chr8:102277121-102277122|TT/-|frameshift_variant	83.6470233535746	0.08277643980271215	6				NaN	NaN	0	NaN	10874	3768	14639
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14645	37.454	NaN	1699.7	30	0	194.09	0.036			+	10567	EYFGRKEM	8	60	530.2505799360547	NaN	0	530.2504272460938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EYFGRKEM_	REV__ENSG00000107679|ENST00000368990|PLEKHA1;REV__ENST00000368989.6_2_10:124187820-124189451:+|nuORF	47.91560031466742	1.7418937515398478	6				NaN	NaN	0	NaN	10875	3768	14639
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14646	37.455	NaN	1617.9	30	0	180.66	0.145				-1	LALDTQLLMGN	11	43	402.21253533123286	NaN	0	402.21234130859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_LALDTQLLM(Oxidation (M))GN_	ENSG00000135472|ENST00000320634|FAIM2;nc|ENSG00000135472|Q9BWQ8-2|FAIM2	24.231819034082204	0.456735970842152	6				NaN	NaN	0	NaN	10876	3768	14639
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14665	37.495	NaN	3491.3	30	0	283.99	0.214	+			36489	SEVVDVAKL	9	61	480.2743016797349	958.5340504262698	2	480.2738342285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEVVDVAKL_	ENSG00000145555|ENST00000513610|MYO10;nc|ENSG00000145555|Q9HD67-3|MYO10	101.25262130126117	0.03792372629710479	6				NaN	NaN	0	NaN	10892	3771	14664
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14666	37.498	NaN	4312.9	30	0	691.78	0.106	+			35901	SEFKAMDSI	9	60	514.2418419788618	1026.4691310245234	2	514.2420043945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEFKAMDSI_	CTNNA1|p.L897I|1|0.68|ENSG00000044115|chr5:138934057-138934057|C/A|missense_variant;ENSG00000044115|ENST00000302763|CTNNA1;ENST00000522792.1_1_5:138268134-138269775:+|nuORF;nc|ENSG00000044115|P35221-2|CTNNA1;nc|ENSG00000044115|P35221-3|CTNNA1	129.42129120953632	0.01549634589885217	6				NaN	NaN	0	NaN	10893	3771	14664
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14667	37.5	NaN	2812	30	0	335.5	0.106			+	-1	FVCSIAAVAV	10	62	518.7787147238561	1035.542876514512	2	518.7852783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_FVC(Carbamidomethyl (C))SIAAVAV_	REV__ENSG00000253767|ENST00000398604|PCDHGA8;REV__nc|ENSG00000253767|Q9Y5G5-2|PCDHGA8;REV__PCDHGA8|p.L712Sfs*33|1|0.15|ENSG00000253767|chr5:141394944-141394945|-/T|frameshift_variant;REV__PCDHGA8|p.N788Kfs*2|1|0.27|ENSG00000253767|chr5:141395171-141395172|-/A|frameshift_variant	47.91560031466742	0.4762067885998563	6				NaN	NaN	0	NaN	10894	3771	14664
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14668	37.502	NaN	1922.2	30	0	330.31	0.106				-1	IMEKFNTI	8	65	506.2648010253906	NaN	0	506.2648010253906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_IM(Oxidation (M))EKFNTI_	ENSG00000137634|ENST00000375478|NXPE4	37.81151784470057	1.7418937515398478	6				NaN	NaN	0	NaN	10895	3771	14664
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14669	37.504	NaN	1124.8	30	0	177.04	0.106				-1	VKEICFNSK	9	45	562.7926025390625	NaN	0	562.7926025390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_VKEIC(Carbamidomethyl (C))FNSK_	ENSG00000188738|ENST00000424728|FSIP2;FSIP2|p.D5579Mfs*10|1|0.09|ENSG00000188738|chr2:185806029-185806029|A/-|frameshift_variant;FSIP2|p.K6152Rfs*27|1|0.43|ENSG00000188738|chr2:185807758-185807758|A/-|frameshift_variant;FSIP2|p.K6528Nfs*5|1|0.33|ENSG00000188738|chr2:185808884-185808884|A/-|frameshift_variant;FSIP2|p.V5734Yfs*24|2|0.23|ENSG00000188738|chr2:185806499-185806499|A/-|frameshift_variant;FSIP2|p.V6322*|1|0.42|ENSG00000188738|chr2:185808265-185808265|A/-|frameshift_variant;nc|ENSG00000188738|Q5CZC0-2|FSIP2	35.61828744233558	0.29773779453147337	6				NaN	NaN	0	NaN	10896	3771	14664
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14670	37.506	NaN	2547.9	30	0	892.78	0.034	+			13030	GEVNGKIVD	9	64	465.74814655282375	929.4817401724475	2	465.7491149902344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GEVNGKIVD_	tr|U7SLQ0|U7SLQ0_FUSNUMultifunctionalfusionproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=rphPE=3SV=1	47.657333605630114	0.33044192980041115	6				NaN	NaN	0	NaN	10897	3771	14664
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14671	37.506	NaN	2125	30	0	222.53	0.139			+	26562	LTSPICAHA	9	54	456.7340089629544	911.4534649927089	2	456.7346496582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LTSPICAHA_	REV__ENST00000442007.1_1_6:73985509-73985899:+|nuORF	33.51558372728122	0.4900267029546261	6				NaN	NaN	0	NaN	10898	3771	14664
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14689	37.545	NaN	2580.6	30	0	461.25	0.214	+			17572	IEALLHTV	8	52	448.2660125701853	894.5174722071706	2	448.2658386230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IEALLHTV_	ENSG00000241258|ENST00000395326|CRCP;ENST00000492264.1_1_7:65615923-65617341:+|nuORF;nc|ENSG00000241258|O75575-2|CRCP;nc|ENSG00000241258|O75575-3|CRCP;nc|ENSG00000241258|O75575-4|CRCP	102.7733458925114	0.2491487235419157	6				NaN	NaN	0	NaN	10913	3774	14688
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14690	37.549	NaN	4836.4	30	0	1295.6	0.106	+			25060	LLLAGLLGGAG	11	62	477.80314000758636	953.5917270819727	2	477.8025817871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LLLAGLLGGAG_	ENSG00000176845|ENST00000320095|METRNL;METRNL|p.L303*|1|0.41|ENSG00000176845|chr17:83094541-83094541|G/-|frameshift_variant	71.37791200682192	0.22425249707831713	6				NaN	NaN	0	NaN	10914	3774	14688
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14691	37.551	NaN	2097.1	30	0	516.65	0.106	+			15236	GTSWVFGVLA	10	54	518.7787147238561	1035.542876514512	2	518.7789306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTSWVFGVLA_	ENSG00000111452|ENST00000261654|ADGRD1;ENST00000540207.1_1_12:131606534-131623805:+|nuORF;nc|ENSG00000111452|Q6QNK2-2|ADGRD1;nc|ENSG00000111452|Q6QNK2-3|ADGRD1;nc|ENSG00000111452|Q6QNK2-4|ADGRD1	35.61828744233558	0.588957954432594	6				NaN	NaN	0	NaN	10915	3774	14688
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14692	37.553	NaN	1451.3	30	0	456.15	0.106			+	44082	TPTGKADQ	8	44	409.2058227251716	816.3970925171432	2	409.20587158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TPTGKADQ_	REV__ENSG00000137877|ENST00000320955|SPTBN5	26.69291269510374	0.7532304684939817	6				NaN	NaN	0	NaN	10916	3774	14688
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14693	37.555	NaN	2220.8	30	0	267.39	0.035	+			48603	VTRFGGDRV	9	65	503.77390308036456	1005.5332532275291	2	504.273681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTRFGGDRV_	ACACB|p.L1398Sfs*26|1|0.18|ENSG00000076555|chr12:109233795-109233795|C/-|frameshift_variant;ACACB|p.T1476Hfs*7|1|0.28|ENSG00000076555|chr12:109235620-109235621|-/T|frameshift_variant;ENSG00000076555|ENST00000338432|ACACB;ENST00000546328.1_1_12:109577795-109604957:+|nuORF;nc|ENSG00000076555|O00763-2|ACACB;nc|ENSG00000076555|O00763-3|ACACB	41.42661286455405	0.403525789677298	6				NaN	NaN	0	NaN	10917	3774	14688
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14711	37.592	NaN	9718.8	30	0	2212.7	0.215	+			37786	SLYFSAGLL	9	58	485.76433562679716	969.5141183203943	2	485.7635498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLYFSAGLL_	ENSG00000070269|ENST00000261556|TMEM260;ENST00000557626.5_1_14:57046563-57082746:+|nuORF;ENST00000557657.5_1_14:57046563-57079004:+|nuORF;nc|ENSG00000070269|Q9NX78-2|TMEM260;nc|ENSG00000070269|Q9NX78-3|TMEM260	45.9519527083369	0.35044536499095585	6				NaN	NaN	0	NaN	10932	3777	14710
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14712	37.596	NaN	1704.7	30	0	138.01	0.106			+	35485	SATGVLFLL	9	53	460.77629121449473	919.5380294957895	2	460.77642822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SATGVLFLL_	REV__B3GNT3|p.W249Gfs*10|1|0.12|ENSG00000179913|chr19:17811744-17811744|T/-|frameshift_variant;REV__ENSG00000179913|ENST00000318683|B3GNT3	47.91560031466742	0.327412564698279	6				NaN	NaN	0	NaN	10933	3777	14710
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14713	37.598	NaN	1802.9	30	0	247.21	0.106				-1	LEMTNLKIL	9	62	545.8123027161782	1089.6100524991564	2	545.8115844726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_LEM(Oxidation (M))TNLKIL_	ENST00000589292.1_1_18:57678182-57678296:-|nuORF	34.172542307311794	0.4838870758800184	6				NaN	NaN	0	NaN	10934	3777	14710
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14714	37.6	NaN	1600.1	30	0	151.62	0.035			+	28496	NGVPGPIPVM	10	51	490.76554486299955	979.5165367927991	2	490.7645263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NGVPGPIPVM_	REV__ENSG00000092978|ENST00000366935|GPATCH2;REV__ENST00000470014.6_1_1:217668369-217783710:-|nuORF;REV__ENST00000485274.1_1_1:217671646-217783710:-|nuORF	57.81127852772723	0.38574637483653407	6				NaN	NaN	0	NaN	10935	3777	14710
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14732	37.637	NaN	4153.8	30	0	818.04	0.214	+			39865	STLPAITLK	9	61	472.295050539245	942.57554814529	2	472.29449462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STLPAITLK_	ENSG00000117984|ENST00000236671|CTSD	44.377184641726394	0.36891676396732553	6				NaN	NaN	0	NaN	10950	3780	14731
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14733	37.641	NaN	4375.3	30	0	498.76	0.106			+	36452	SEVKLYSL	8	65	469.7652544653223	937.5159559974446	2	469.7680358886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEVKLYSL_	REV__ENST00000506130.5_1_5:72853376-72858450:-|nuORF	77.31757898189308	0.345924878368729	6				NaN	NaN	0	NaN	10951	3780	14731
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14734	37.643	NaN	1579.7	30	0	260.54	0.106			+	36796	SICTGTVRLG	10	54	503.7732849121094	NaN	0	503.7732849121094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SICTGTVRLG_	REV__ENST00000339374.10_1_14:21458030-21458174:+|nuORF	40.77816245573522	0.36390427802201647	6				NaN	NaN	0	NaN	10952	3780	14731
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14735	37.645	NaN	1076.1	30	0	131.79	0.106	+			1520	AGALIGVLLG	10	52	442.2842785239601	882.5540041147202	2	442.2845764160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AGALIGVLLG_	ENSG00000019102|ENST00000326621|VSIG2;nc|ENSG00000019102|Q96IQ7-2|VSIG2	35.200714571348534	0.5923680232273616	6				NaN	NaN	0	NaN	10953	3780	14731
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14736	37.646	NaN	1720.3	30	0	122.69	0.034			+	10124	ESNIVDHF	8	67	480.7265193770789	NaN	0	480.72686767578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ESNIVDHF_	REV__ENSG00000174099|ENST00000308259|MSRB3;REV__ENST00000535143.1_1_12:65737965-65857099:+|nuORF;REV__nc|ENSG00000174099|Q8IXL7|MSRB3	60.97194046774394	1.7418937515398478	6				NaN	NaN	0	NaN	10954	3780	14731
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14754	37.684	NaN	4496.5	30	0	462.65	0.214	+			43712	TKPVKCILN	9	69	508.30198999816247	1014.589427063125	2	508.3021545410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TKPVKCILN_	ENSG00000141446|ENST00000269214|ESCO1;nc|ENSG00000141446|Q5FWF5-2|ESCO1	33.921630207806714	0.48623198279849766	6				NaN	NaN	0	NaN	10969	3783	14753
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14755	37.688	NaN	2150.5	30	0	359.69	0.106	+			928	AEIKIQGL	8	48	436.2664329043942	870.5183128755884	2	436.2663269042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEIKIQGL_	ENSG00000129003|ENST00000644861|VPS13C;nc|ENSG00000129003|Q709C8-2|VPS13C;nc|ENSG00000129003|Q709C8-3|VPS13C;nc|ENSG00000129003|Q709C8-4|VPS13C;VPS13C|p.D1169Ifs*15|1|0.38|ENSG00000129003|chr15:61962469-61962469|C/-|frameshift_variant;VPS13C|p.E2463Nfs*18|1|0.25|ENSG00000129003|chr15:61920157-61920157|C/-|frameshift_variant;VPS13C|p.N3163Sfs*6|1|0.05|ENSG00000129003|chr15:61882732-61882733|-/TTATCATCAC|frameshift_variant;VPS13C|p.P3597Lfs*3|1|0.26|ENSG00000129003|chr15:61868732-61868732|G/-|frameshift_variant	74.25504064058377	0.37144338840759816	6				NaN	NaN	0	NaN	10970	3783	14753
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14756	37.69	NaN	1875.7	30	0	361.67	0.106			+	25123	LLQLMDPPV	9	58	513.2886407110129	1024.5627284888258	2	513.2874755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LLQLMDPPV_	REV__ENSG00000162413|ENST00000377658|KLHL21;REV__nc|ENSG00000162413|Q9UJP4-2|KLHL21	42.396135135203025	0.392153681582562	6				NaN	NaN	0	NaN	10971	3783	14753
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14757	37.691	NaN	2665.5	30	0	676.33	0.106	+			11095	FFELNYQF	8	62	554.2611744432735	1106.5077959533469	2	554.2616577148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FFELNYQF_	ENSG00000197969|ENST00000360280|VPS13A;nc|ENSG00000197969|Q96RL7-2|VPS13A;nc|ENSG00000197969|Q96RL7-3|VPS13A;nc|ENSG00000197969|Q96RL7-4|VPS13A	60.97194046774394	0.49215940876911696	6				NaN	NaN	0	NaN	10972	3783	14753
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14758	37.693	NaN	3052.3	30	0	354.03	0.106	+			51332	YSMIPPAQQ	9	58	517.7531185795552	1033.4916842259104	2	517.7531127929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YSMIPPAQQ_	ENSG00000179912|ENST00000402412|R3HDM2;ENST00000546843.2_1_12:57662084-57662234:-|nuORF;ENST00000548184.1_1_12:57644959-57689258:-|nuORF;nc|ENSG00000179912|Q9Y2K5-2|R3HDM2;nc|ENSG00000179912|Q9Y2K5-3|R3HDM2;nc|ENSG00000179912|Q9Y2K5|R3HDM2;R3HDM2|p.D913Gfs*7|1|0.51|ENSG00000179912|chr12:57254966-57254967|-/C|frameshift_variant;R3HDM2|p.D913Tfs*41|1|0.42|ENSG00000179912|chr12:57254967-57254967|C/-|frameshift_variant;R3HDM2|p.P672Lfs*34|2|0.2|ENSG00000179912|chr12:57266805-57266805|G/-|frameshift_variant	42.396135135203025	0.392153681582562	6				NaN	NaN	0	NaN	10973	3783	14753
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14759	37.695	NaN	1449.7	30	0	170.57	0.033	+			36557	SFPGGPEF	8	51	419.19268798828125	NaN	0	419.19268798828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SFPGGPEF_	nc|ENSG00000259009|P0DV77|TPRX2	33.51558372728122	1.7418937515398478	6				NaN	NaN	0	NaN	10974	3783	14753
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14760	37.696	NaN	948.66	30	0	88.149	0.14	+			47739	VSGIYGYVM	9	50	494.7445373535156	NaN	0	494.7445373535156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VSGIYGYVM_	ENSG00000165124|ENST00000374469|SVEP1;ENST00000467821.1_1_9:113205816-113312285:-|nuORF;nc|ENSG00000165124|Q4LDE5-4|SVEP1;SVEP1|p.Y3375Mfs*48|1|0.3|ENSG00000165124|chr9:110386012-110386012|A/-|frameshift_variant	44.53106598305862	0.24438232876904814	6				NaN	NaN	0	NaN	10975	3783	14753
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14778	37.735	NaN	4044.4	30	0	527.25	0.214	+			48994	VVGLIQDLY	9	61	510.29269637630125	1018.5708398194025	2	510.292724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVGLIQDLY_	ENST00000380916.8_1_9:14618745-14618955:-|nuORF	63.30626980617807	0.18605348971131092	6				NaN	NaN	0	NaN	10990	3786	14777
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14779	37.738	NaN	2188.7	30	0	208.84	0.106	+			42768	TDVYLKSL	8	55	469.7652544653223	937.5159559974446	2	469.7641906738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TDVYLKSL_	C2CD5|p.D676Mfs*40|1|0.33|ENSG00000111731|chr12:22474769-22474769|T/-|frameshift_variant;C2CD5|p.F331Lfs*5|1|0.32|ENSG00000111731|chr12:22513345-22513345|C/-|frameshift_variant;ENSG00000111731|ENST00000446597|C2CD5;ENST00000535304.1_1_12:22688182-22697084:-|nuORF;ENST00000541310.5_1_12:22631189-22697084:-|nuORF;nc|ENSG00000111731|Q86YS7-2|C2CD5;nc|ENSG00000111731|Q86YS7-4|C2CD5;nc|ENSG00000111731|Q86YS7-5|C2CD5;nc|ENSG00000111731|Q86YS7|C2CD5	49.44154591367651	0.597725784090933	6				NaN	NaN	0	NaN	10991	3786	14777
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14780	37.74	NaN	3049.4	30	0	655.69	0.106	+			49584	VYFSAAHAL	9	58	489.75595511288424	977.4973572925685	2	489.7559814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYFSAAHAL_	ENSG00000135336|ENST00000392844|ORC3;nc|ENSG00000135336|Q9UBD5-2|ORC3;nc|ENSG00000135336|Q9UBD5-3|ORC3	110.33723246496265	0.028653888678955353	6				NaN	NaN	0	NaN	10992	3786	14777
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14781	37.742	NaN	1848.8	30	0	156.07	0.106	+			27587	MPKVHIEF	8	61	500.76836358030005	NaN	0	500.76824951171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MPKVHIEF_	ENSG00000115677|ENST00000310931|HDLBP;HDLBP|p.S551Kfs*2|1|0.11|ENSG00000115677|chr2:241248082-241248083|-/T|frameshift_variant;nc|ENSG00000115677|Q00341-2|HDLBP	74.25504064058377	1.7418937515398478	6				NaN	NaN	0	NaN	10993	3786	14777
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14782	37.744	NaN	3551.6	30	0	564.19	0.036	+			43268	TFDGKTYTF	9	73	540.2559854090256	1078.497417884851	2	540.7579956054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TFDGKTYTF_	ENSG00000198788|ENST00000675028|MUC2;nc|ENSG00000198788|Q02817|MUC2	58.22992032128504	0.22837015374068087	6				NaN	NaN	0	NaN	10994	3786	14777
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14800	37.78	NaN	17598	30	0	1535.7	0.214				-1	 	0	72	479.7539160264348	957.4932791196696	2	479.753662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11009	3789	14799
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14801	37.784	NaN	7206.4	30	0	1284.4	0.106	+			19955	KEGEIIHLI	9	65	526.311019861773	1050.607486790346	2	526.3118286132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEGEIIHLI_	ENSG00000198087|ENST00000359314|CD2AP;ENST00000463175.1_1_6:47544277-47547315:+|nuORF	82.24051045832904	0.08786059719216216	6				NaN	NaN	0	NaN	11010	3789	14799
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14802	37.786	NaN	5018.5	30	0	1092.7	0.106	+			41641	SVQSGNLAL	9	59	444.7429500684689	887.4713472037378	2	444.7428894042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVQSGNLAL_	ENSG00000011304|ENST00000356948|PTBP1;ENST00000586944.5_1_19:797434-805231:+|nuORF;nc|ENSG00000011304|P26599-1|PTBP1;nc|ENSG00000011304|P26599-2|PTBP1	106.68306549817024	0.032382560583716295	6				NaN	NaN	0	NaN	11011	3789	14799
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14803	37.788	NaN	3618.7	30	0	388.08	0.106	+			7811	DPNEIKVVY	9	68	538.7852531159726	1075.5559532987452	2	538.7857666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DPNEIKVVY_	ENSG00000197958|ENST00000361436|RPL12;nc|ENSG00000197958|P30050-2|RPL12;RPL12|p.V42Lfs*15|1|0.26|ENSG00000197958|chr9:127449697-127449697|T/-|frameshift_variant	63.53385203322761	0.18415635464017938	6				NaN	NaN	0	NaN	11012	3789	14799
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14804	37.789	NaN	12169	30	0	1845.1	0.106			+	7652	DKQFVLGK	8	68	467.7715492797481	933.5285456262962	2	467.77166748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DKQFVLGK_	REV__ENSG00000107960|ENST00000224950|STN1;REV__ENST00000466828.5_1_10:105642444-105658073:-|nuORF	69.6276240434122	0.4100012001731381	6				NaN	NaN	0	NaN	11013	3789	14799
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14805	37.791	NaN	2663.3	30	0	291.88	0.034			+	15741	GVSAWLVQI	9	66	486.7797637426868	971.5449745521736	2	486.77935791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GVSAWLVQI_	REV__ENST00000536241.1_1_12:6959960-6960418:-|nuORF	49.44154591367651	0.3095138337212152	6				NaN	NaN	0	NaN	11014	3789	14799
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14806	37.792	NaN	2772.7	30	0	252.11	0.14			+	44733	TTLTFPVGK	9	58	482.27902431641763	962.5434956996353	2	482.7770690917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TTLTFPVGK_	REV__ENSG00000169583|ENST00000494426|CLIC3;REV__ENST00000473911.1_1_9:139890098-139890974:-|nuORF;REV__ENST00000480181.1_1_9:139889560-139890188:-|nuORF	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	11015	3789	14799
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14824	37.831	NaN	14367	30	0	1424.5	0.214	+			34229	RTFTWLVGK	9	90	554.3189116104928	1106.6232702877855	2	554.31982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTFTWLVGK_	ENSG00000197879|ENST00000648651|MYO1C;nc|ENSG00000197879|O00159-2|MYO1C;nc|ENSG00000197879|O00159-3|MYO1C	47.95952297671804	0.32689736945648856	6				NaN	NaN	0	NaN	11030	3792	14823
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14825	37.835	NaN	3680.3	30	0	1308.4	0.106	+			30566	QAMAKYMAL	9	63	513.7594293942459	1025.5043058552917	2	513.7601928710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QAMAKYMAL_	ENSG00000145555|ENST00000513610|MYO10;nc|ENSG00000145555|Q9HD67-3|MYO10	71.29570347882199	0.13518600952103718	6				NaN	NaN	0	NaN	11031	3792	14823
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14826	37.837	NaN	5870.6	30	0	1112.5	0.106	+			16273	HEGDIILKI	9	68	519.303096667785	1036.5916404023699	2	519.3037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HEGDIILKI_	ENSG00000119139|ENST00000377245|TJP2;nc|ENSG00000119139|Q9UDY2-2|TJP2;nc|ENSG00000119139|Q9UDY2-3|TJP2;nc|ENSG00000119139|Q9UDY2-4|TJP2;nc|ENSG00000119139|Q9UDY2-5|TJP2;nc|ENSG00000119139|Q9UDY2-6|TJP2;nc|ENSG00000119139|Q9UDY2-7|TJP2;TJP2|p.F813Sfs*12|1|0.23|ENSG00000119139|chr9:69240013-69240013|T/-|frameshift_variant;TJP2|p.P484Qfs*30|1|0.18|ENSG00000119139|chr9:69228107-69228107|C/-|frameshift_variant;TJP2|p.T849Rfs*12|1|0.32|ENSG00000119139|chr9:69240120-69240120|A/-|frameshift_variant	96.66504779109242	0.04607440320619715	6				NaN	NaN	0	NaN	11032	3792	14823
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14827	37.839	NaN	1835.9	30	0	619.12	0.106	+			25061	LLLALPSLQQ	10	57	548.3429087763203	NaN	0	548.3419189453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LLLALPSLQQ_	N4BP1|p.P834L|1|0.07|ENSG00000102921|chr16:48543094-48543094|G/A|missense_variant	26.69291269510374	0.4125295221340092	6				NaN	NaN	0	NaN	11033	3792	14823
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14828	37.84	NaN	4739.4	30	0	756.02	0.106			+	31472	QKYLLVGQ	8	62	474.7791676618638	947.5437823905277	2	474.7789306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QKYLLVGQ_	REV__ENSG00000103365|ENST00000309859|GGA2;REV__GGA2|p.T304A|1|0.28|ENSG00000103365|chr16:23480741-23480741|T/C|missense_variant	57.81127852772723	0.5234495074909924	6				NaN	NaN	0	NaN	11034	3792	14823
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14829	37.842	NaN	1826.2	30	0	180.79	0.035	+			11620	FPYGDASKF	9	62	516.2453226437042	1030.4760923542083	2	516.246337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FPYGDASKF_	ENSG00000104490|ENST00000220931|NCALD;ENSG00000115756|ENST00000307845|HPCAL1;ENSG00000116983|ENST00000372844|HPCAL4;ENSG00000121905|ENST00000373467|HPCA;ENSG00000163032|ENST00000295156|VSNL1;HPCAL4|p.N75Efs*32|1|0.41|ENSG00000116983|chr1:39684093-39684094|-/T|frameshift_variant	79.71258880314673	0.09879134589249085	6				NaN	NaN	0	NaN	11035	3792	14823
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14847	37.88	NaN	11252	30	0	2000.3	0.214	+			44789	TTQLSLSFK	9	69	512.7872839295123	NaN	0	512.787353515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTQLSLSFK_	ENSG00000198786|ENST00000361567|MT-ND5	114.85826248499774	0.0053097169743072554	6				NaN	NaN	0	NaN	11050	3795	14846
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14848	37.883	NaN	6830.6	30	0	1167.6	0.106	+			46441	VESGKLFSV	9	66	483.2685821451796	964.5226113571592	2	483.2685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VESGKLFSV_	ENSG00000030066|ENST00000378460|NUP160;ENST00000529863.1_1_11:47861610-47869870:-|nuORF;nc|ENSG00000030066|Q12769-2|NUP160;nc|ENSG00000030066|Q12769|NUP160	50.79123845855914	0.29368248050764684	6				NaN	NaN	0	NaN	11051	3795	14846
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14849	37.885	NaN	2816.5	30	0	786.32	0.106			+	26059	LSLPSHTM	8	52	443.22844216011254	884.4423313870251	2	443.2281799316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSLPSHTM_	REV__ENST00000228799.6_1_12:2933460-2933670:+|nuORF	65.80317337860623	0.44433089765398776	6				NaN	NaN	0	NaN	11052	3795	14846
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14850	37.887	NaN	3048.8	30	0	958.93	0.106	+			39289	STASFIFSK	9	57	494.2611248147149	986.5076966962298	2	494.2604064941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STASFIFSK_	ENSG00000162522|ENST00000401073|KIAA1522;nc|ENSG00000162522|Q9P206-3|NHSL3;nc|ENSG00000162522|Q9P206|NHSL3	69.6276240434122	0.14239879520340665	6				NaN	NaN	0	NaN	11053	3795	14846
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14851	37.889	NaN	1448.1	30	0	97.206	0.106	+			31188	QGPNIIPAD	9	56	462.742789906609	NaN	0	462.7427062988281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QGPNIIPAD_	DNAJB13|p.L230Pfs*5|1|0.35|ENSG00000187726|chr11:73968424-73968425|-/CC|frameshift_variant;DNAJB13|p.Q305Rfs*11|1|0.08|ENSG00000187726|chr11:73970073-73970073|C/-|frameshift_variant;ENSG00000187726|ENST00000339764|DNAJB13;nc|ENSG00000187726|P59910-2|DNAJB13	66.42927471994793	0.121898005645852	6				NaN	NaN	0	NaN	11054	3795	14846
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14852	37.891	NaN	1565.7	30	0	169.05	0.036	+			43918	TPAEPVQYY	9	55	534.2547409046084	1066.4949288760167	2	534.256103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TPAEPVQYY_	ENSG00000066136|ENST00000447388|NFYC;ENST00000424419.6_1_1:41157373-41232429:+|nuORF;ENST00000467203.5_1_1:41157373-41224011:+|nuORF;nc|ENSG00000066136|Q13952-3|NFYC;nc|ENSG00000066136|Q13952-4|NFYC;nc|ENSG00000066136|Q13952-5|NFYC;nc|ENSG00000066136|Q13952-6|NFYC;nc|ENSG00000066136|Q13952-7|NFYC;nc|ENSG00000066136|Q13952|NFYC	58.78195531508484	0.22376836668196862	6				NaN	NaN	0	NaN	11055	3795	14846
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14853	37.891	NaN	950.58	30	0	43.292	0.139			+	3042	ASFIFLPI	8	48	454.2659103539611	NaN	0	454.26495361328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASFIFLPI_	REV__ENSG00000141698|ENST00000435506|NT5C3B;REV__ENST00000469698.5_1_17:39981777-39991902:-|nuORF;REV__nc|ENSG00000141698|Q969T7-2|NT5C3B	37.028477286268924	1.7418937515398478	6				NaN	NaN	0	NaN	11056	3795	14846
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14871	37.93	NaN	51424	30	0	9995	0.214	+			24332	LFKLVSEQ	8	76	482.27902431641763	962.5434956996353	2	482.27874755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LFKLVSEQ_	ENST00000445286.3_1_12:38597181-38597481:+|nuORF	148.04295825190792	0.24280381333290152	6				NaN	NaN	0	NaN	11071	3798	14870
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14872	37.934	NaN	1904.3	30	0	197.16	0.036			+	24666	LGVLYNFLI	9	61	526.311019861773	1050.607486790346	2	526.3091430664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LGVLYNFLI_	REV__ENSG00000144406|ENST00000673920|UNC80;REV__ENST00000489023.5_1_2:210693994-210832362:+|nuORF;REV__nc|ENSG00000144406|Q8N2C7-2|UNC80;REV__nc|ENSG00000144406|Q8N2C7-4|UNC80;REV__nc|ENSG00000144406|Q8N2C7-7|UNC80;REV__nc|ENSG00000144406|Q8N2C7|UNC80;REV__UNC80|p.C1944Afs*12|1|0.28|ENSG00000144406|chr2:209933850-209933850|C/-|frameshift_variant;REV__UNC80|p.N2032*|1|0.42|ENSG00000144406|chr2:209936855-209936856|-/T|frameshift_variant;REV__UNC80|p.P2700Hfs*13|1|0.23|ENSG00000144406|chr2:209972238-209972238|C/-|frameshift_variant	32.81241826257853	0.4965981579233955	6				NaN	NaN	0	NaN	11072	3798	14870
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14890	37.971	NaN	1730.4	30	0	624.91	0.214			+	47986	VSPPLPKLLA	10	24	345.55846627126846	1033.6535694140055	3	345.5583190917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSPPLPKLLA_	REV__ENST00000530149.1_1_11:211118-211532:+|nuORF	16.006774744331256	0.7351120747673535	6				NaN	NaN	0	NaN	11087	3801	14889
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14891	37.974	NaN	1112.4	30	0	80.447	0.106	+			33474	RIVDYLLEK	9	48	574.8374316963424	1147.6603104594847	2	574.837158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RIVDYLLEK_	ENSG00000145555|ENST00000513610|MYO10;MYO10|p.G1223Rfs*28|1|0.25|ENSG00000145555|chr5:16694504-16694505|-/T|frameshift_variant;MYO10|p.I417Tfs*39|1|0.05|ENSG00000145555|chr5:16764326-16764327|-/ACAAATCTCTG|frameshift_variant;MYO10|p.N507Qfs*30|1|0.11|ENSG00000145555|chr5:16762613-16762614|-/TG|frameshift_variant;MYO10|p.S468Ffs*8|1|0.05|ENSG00000145555|chr5:16763679-16763680|-/A|frameshift_variant	37.50817390946774	0.44948750990682723	6				NaN	NaN	0	NaN	11088	3801	14889
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14892	37.976	NaN	1970	30	0	185.04	0.106			+	-1	IQCSVAPGY	9	59	497.73678085300514	993.4590087728103	2	497.7362365722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_IQC(Carbamidomethyl (C))SVAPGY_	REV__GALT|p.H184Tfs*35|1|0.26|ENSG00000213930|chr9:34648153-34648153|C/-|frameshift_variant	44.116797842482775	0.37197099687881774	6				NaN	NaN	0	NaN	11089	3801	14889
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14893	37.978	NaN	1450.7	30	0	140.37	0.034	+			43104	TERDLCFA	8	59	477.7200440433763	953.4255351535526	2	477.7173767089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TERDLCFA_	ENST00000607711.1_1_6:15244870-15244918:-|nuORF	44.116797842482775	0.6307669463330267	6				NaN	NaN	0	NaN	11090	3801	14889
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14911	38.016	NaN	19908	30	0	3040.8	0.214	+			7263	DALVITHY	8	76	466.2477940250603	930.4810351169206	2	466.24786376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DALVITHY_	ENSG00000109917|ENST00000227322|ZPR1	106.41520541750704	0.2471395129373963	6				NaN	NaN	0	NaN	11105	3804	14910
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14912	38.019	NaN	3152.6	30	0	797.55	0.106	+			10108	ESLQKTIY	8	64	491.2661210989787	NaN	0	491.2660217285156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ESLQKTIY_	ENSG00000067900|ENST00000399799|ROCK1;ROCK1|p.I1150Nfs*5|1|0.23|ENSG00000067900|chr18:20959903-20959904|-/T|frameshift_variant;ROCK1|p.K1307Nfs*3|1|0.28|ENSG00000067900|chr18:20953718-20953718|T/-|frameshift_variant;ROCK1|p.K818Efs*6|1|0.51|ENSG00000067900|chr18:20984387-20984388|TT/-|frameshift_variant;ROCK1|p.N871Kfs*14|1|0.07|ENSG00000067900|chr18:20979951-20979952|-/T|frameshift_variant;ROCK1|p.N871Tfs*5|1|0.29|ENSG00000067900|chr18:20979952-20979952|T/-|frameshift_variant;ROCK1|p.P1257Lfs*3|1|0.21|ENSG00000067900|chr18:20954866-20954866|G/-|frameshift_variant	45.9519527083369	1.7418937515398478	6				NaN	NaN	0	NaN	11106	3804	14910
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14913	38.021	NaN	2812.6	30	0	336.33	0.106			+	8053	DVEQIVGEM	9	66	510.23958261328164	1018.4646122933633	2	510.23968505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DVEQIVGEM_	REV__ENSG00000130396|ENST00000683244|AFDN	56.72105179125745	0.24094814563026265	6				NaN	NaN	0	NaN	11107	3804	14910
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14914	38.023	NaN	2046.1	30	0	609.88	0.106	+			19631	KDKAELISGP	10	55	529.2981750374764	1056.5817971417528	2	529.298095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KDKAELISGP_	ENSG00000115486|ENST00000233838|GGCX;ENST00000496962.1_1_2:85786016-85788551:-|nuORF;GGCX|p.P636Qfs*11|1|0.07|ENSG00000115486|chr2:85550732-85550732|G/-|frameshift_variant	74.25504064058377	0.24255678544297835	6				NaN	NaN	0	NaN	11108	3804	14910
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14915	38.025	NaN	1133	30	0	169.16	0.106			+	30665	QAVLLVAGL	9	42	442.2842785239601	882.5540041147202	2	442.2843933105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QAVLLVAGL_	REV__ENSG00000002587|ENST00000002596|HS3ST1	40.5726180659479	0.4135428067754104	6				NaN	NaN	0	NaN	11109	3804	14910
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14916	38.027	NaN	848.91	30	0	79.961	0.035	+			642	AEADKIYSF	9	46	522.2559620040041	NaN	0	522.2572021484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEADKIYSF_	ENSG00000180357|ENST00000326648|ZNF609;ZNF609|p.P882Lfs*30|1|0.33|ENSG00000180357|chr15:64675495-64675495|C/-|frameshift_variant	44.377184641726394	0.24544280798894275	6				NaN	NaN	0	NaN	11110	3804	14910
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14917	38.027	NaN	1079.8	30	0	69.716	0.139	+			12324	GDHRIGIF	8	51	457.74509438515355	NaN	0	457.7457275390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GDHRIGIF_	ENSG00000106462|ENST00000320356|EZH2;ENSG00000108799|ENST00000428826|EZH1;ENST00000492143.5_1_7:148504740-148513906:-|nuORF;ENST00000586714.1_1_17:40854552-40854989:-|nuORF;nc|ENSG00000106462|Q15910-3|EZH2;nc|ENSG00000106462|Q15910-4|EZH2;nc|ENSG00000106462|Q15910-5|EZH2;nc|ENSG00000106462|Q15910|EZH2;nc|ENSG00000108799|Q92800-2|EZH1;nc|ENSG00000108799|Q92800-3|EZH1;nc|ENSG00000108799|Q92800-4|EZH1;nc|ENSG00000108799|Q92800-5|EZH1	42.47446043378293	1.7418937515398478	6				NaN	NaN	0	NaN	11111	3804	14910
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14935	38.065	NaN	4412.5	30	0	1376.3	0.214	+			40989	SVGMYLISK	9	68	499.27349338981173	996.5324338464235	2	499.27301025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVGMYLISK_	ENSG00000070669|ENST00000394308|ASNS;ENST00000462436.1_1_7:97484616-97487685:-|nuORF;nc|ENSG00000070669|P08243-2|ASNS;nc|ENSG00000070669|P08243-3|ASNS;TRRAP-ASNS|1|fusion;TRRAP-ASNS|2|fusion	54.722347961057174	0.257609425301511	6				NaN	NaN	0	NaN	11126	3807	14934
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14936	38.069	NaN	6191.6	30	0	514.97	0.106	+			2476	APLQEKVVF	9	73	515.8001421884653	1029.5857314437305	2	515.8003540039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_APLQEKVVF_	ENSG00000006831|ENST00000357103|ADIPOR2;ENSG00000159346|ENST00000340990|ADIPOR1	54.722347961057174	0.257609425301511	6				NaN	NaN	0	NaN	11127	3807	14934
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14937	38.071	NaN	4723.4	30	0	755.59	0.106	+			21208	KLFDFVNAK	9	67	541.3057427069114	1080.5969324806226	2	541.3063354492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KLFDFVNAK_	ENSG00000149136|ENST00000278412|SSRP1;ENST00000293880.9_1_11:57098199-57100416:-|nuORF	66.96192283764107	0.15557981141143568	6				NaN	NaN	0	NaN	11128	3807	14934
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14938	38.073	NaN	4268.6	30	0	642.08	0.106	+			7415	DEKYSVSNI	9	67	527.7561247657255	1053.497696598251	2	527.7564086914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DEKYSVSNI_	ANKRD36|p.D595Y|1|0.27|ENSG00000135976|chr2:97181739-97181739|G/T|missense_variant	70.8162118820467	0.13725933411854815	6				NaN	NaN	0	NaN	11129	3807	14934
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14939	38.074	NaN	16715	30	0	2273.9	0.106	+			250	AAMLDTVVFK	10	76	555.796408552118	1109.578264171036	2	555.7970581054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_AAM(Oxidation (M))LDTVVFK_	ENSG00000115233|ENST00000409682|PSMD14;ENST00000477232.5_1_2:162241962-162267908:+|nuORF;ENST00000492908.1_1_2:162265323-162267908:+|nuORF	150.36159442982594	0.008431331982545942	6				NaN	NaN	0	NaN	11130	3807	14934
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14940	38.076	NaN	2294	30	0	189.89	0.106			+	6905	CLTTYLQQ	8	56	485.2392654142749	968.4639778953498	2	485.23895263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_CLTTYLQQ_	REV__ENSG00000156026|ENST00000373053|MCU;REV__MCU|p.N318Ifs*19|1|0.09|ENSG00000156026|chr10:72884356-72884357|-/TATGT|frameshift_variant;REV__nc|ENSG00000156026|Q8NE86-3|MCU	31.954861631926434	0.7126016770032289	6				NaN	NaN	0	NaN	11131	3807	14934
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14941	38.078	NaN	1436.2	30	0	174.38	0.038	+			24770	LICSKMNPLW	10	39	402.21279394715367	1203.616552441661	3	402.21185302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LICSKMNPLW_	CON__ENSEMBL:ENSBTAP00000011227;CON__ENSEMBL:ENSBTAP00000033053	30.317721548370564	0.6322445173429027	6				NaN	NaN	0	NaN	11132	3807	14934
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14954	38.104	NaN	3904.8	30	0	563.19	0.214	+			25485	LPSEIEVKY	9	71	539.2951350682455	1076.5757172032909	2	539.295166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LPSEIEVKY_	ANAPC7|p.K150Nfs*22|1|0.27|ENSG00000196510|chr12:110395161-110395161|T/-|frameshift_variant;ENSG00000196510|ENST00000455511|ANAPC7;ENST00000464697.1_1_12:110825679-110841468:-|nuORF;ENST00000550231.1_1_12:110825542-110834223:-|nuORF;nc|ENSG00000196510|Q9UJX3-2|ANAPC7	79.71258880314673	0.09879134589249085	6				NaN	NaN	0	NaN	11142	3810	14953
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14955	38.108	NaN	6461	30	0	657.99	0.106	+			8286	EAIGAVIHY	9	71	486.7626413353577	971.5107297375155	2	486.7605895996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EAIGAVIHY_	ENSG00000020129|ENST00000373243|NCDN;nc|ENSG00000020129|Q9UBB6-2|NCDN	114.5961677871614	0.02447110773075179	6				NaN	NaN	0	NaN	11143	3810	14953
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14956	38.11	NaN	2403.3	30	0	341.99	0.106	+			40842	SVELPIVGK	9	55	471.2869011914166	940.5592494496332	2	471.2868347167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVELPIVGK_	ENSG00000240849|ENST00000371652|PEDS1;ENST00000453505.6_1_20:48741597-48767785:-|nuORF	66.42927471994793	0.16001998865088202	6				NaN	NaN	0	NaN	11144	3810	14953
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14957	38.112	NaN	1349.6	30	0	102.75	0.106			+	2049	AKTLQDLL	8	56	451.27263273809467	NaN	0	451.2731628417969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AKTLQDLL_	REV__ENST00000510524.5_1_3:129170769-129177513:+|nuORF	39.252832667884924	1.7418937515398478	6				NaN	NaN	0	NaN	11145	3810	14953
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14958	38.114	NaN	1431.2	30	0	244.76	0.106	+			14840	GTLMISTAL	9	48	453.7518762453837	905.4891995575674	2	453.7518615722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTLMISTAL_	ENST00000447998.6_1_5:150095193-150097878:-|nuORF	73.97473282117947	0.12360187025703594	6				NaN	NaN	0	NaN	11146	3810	14953
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14959	38.115	NaN	1412.6	30	0	235.46	0.106	+			27551	MPEDVKNFY	9	58	571.7631280662258	1141.5117031992515	2	571.7627563476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MPEDVKNFY_	ENSG00000134779|ENST00000334295|TPGS2;ENST00000587511.1_1_18:34387792-34408730:-|nuORF;nc|ENSG00000134779|Q68CL5-1|TPGS2;nc|ENSG00000134779|Q68CL5-3|TPGS2;nc|ENSG00000134779|Q68CL5-4|TPGS2;nc|ENSG00000134779|Q68CL5-5|TPGS2;TPGS2|p.K264Efs*26|1|0.21|ENSG00000134779|chr18:36796919-36796920|-/T|frameshift_variant	51.19269402634007	0.2889735674168909	6				NaN	NaN	0	NaN	11147	3810	14953
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14960	38.117	NaN	2955.2	30	0	322.57	0.037	+			33066	REKIVEVMF	9	63	575.8180369824763	1149.6215210317525	2	575.81787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_REKIVEVMF_	ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2	36.446750945000026	0.4619375763483977	6				NaN	NaN	0	NaN	11148	3810	14953
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14978	38.152	NaN	1636.9	30	0	164.52	0.214			+	-1	VMCPAKSI	8	54	461.22882684167047	920.443100750141	2	461.2283935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_VM(Oxidation (M))C(Carbamidomethyl (C))PAKSI_	REV__ENSG00000198198|ENST00000634258|SZT2;REV__nc|ENSG00000198198|Q5T011-4|SZT2;REV__nc|ENSG00000198198|Q5T011-5|SZT2;REV__SZT2|p.A1115Lfs*4|1|0.26|ENSG00000198198|chr1:43427358-43427358|G/-|frameshift_variant;REV__SZT2|p.H875Tfs*13|1|0.16|ENSG00000198198|chr1:43425177-43425178|-/C|frameshift_variant;REV__SZT2|p.L1644Ffs*4|1|0.36|ENSG00000198198|chr1:43431727-43431728|-/T|frameshift_variant;REV__SZT2|p.P2844Rfs*9|1|0.34|ENSG00000198198|chr1:43443669-43443669|C/-|frameshift_variant;REV__SZT2|p.R3241Afs*11|1|0.33|ENSG00000198198|chr1:43448401-43448401|G/-|frameshift_variant	44.116797842482775	0.6307669463330267	6				NaN	NaN	0	NaN	11163	3813	14977
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14979	38.156	NaN	1398.7	30	0	207.02	0.106			+	19315	KAGVPPVV	8	46	383.7460339444173	NaN	0	383.7460021972656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KAGVPPVV_	REV__ENSG00000125844|ENST00000377813|RRBP1;REV__RRBP1|p.A628Gfs*69|1|0.35|ENSG00000125844|chr20:17621915-17621916|-/T|frameshift_variant	10.184766708764876	1.7418937515398478	6				NaN	NaN	0	NaN	11164	3813	14977
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14980	38.158	NaN	1633	30	0	203.09	0.106			+	11303	FKSNVSSSF	9	61	501.7485617155181	1001.4825704978363	2	501.7485046386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FKSNVSSSF_	REV__ENSG00000178163|ENST00000326756|ZNF518B;REV__ZNF518B|p.T403Nfs*7|1|0.39|ENSG00000178163|chr4:10445121-10445122|-/T|frameshift_variant	63.30626980617807	0.18605348971131092	6				NaN	NaN	0	NaN	11165	3813	14977
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14981	38.16	NaN	1665.7	30	0	226.25	0.034			+	593	ADLPKQQL	8	59	456.76125511874875	911.5079573042975	2	456.7610168457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ADLPKQQL_	REV__KIF4A|p.L841P|1|0.12|ENSG00000090889|chrX:70402598-70402598|T/C|missense_variant	51.33545320467046	0.5859736979383976	6				NaN	NaN	0	NaN	11166	3813	14977
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14999	38.197	NaN	3128.5	30	0	613.59	0.214	+			40861	SVFEDPVISK	10	64	560.7977174111553	1119.5808818891105	2	560.79931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVFEDPVISK_	ENSG00000125445|ENST00000245539|MRPS7;MRPS7|p.L162Pfs*29|1|0.05|ENSG00000125445|chr17:75263482-75263483|-/C|frameshift_variant	56.632244143249146	0.3964695498866976	6				NaN	NaN	0	NaN	11181	3816	14998
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15000	38.2	NaN	2844	30	0	219.7	0.106			+	33337	RGVLRAWI	8	64	485.7999219187391	969.5852909042782	2	485.8002014160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RGVLRAWI_	REV__ENST00000372189.7_1_9:134453434-134453743:-|nuORF	40.5726180659479	0.6527593143185008	6				NaN	NaN	0	NaN	11182	3816	14998
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15001	38.202	NaN	2932.6	30	0	276.48	0.106	+			44073	TPSSVIYHL	9	65	508.7743799386307	1015.5342069440615	2	508.7741394042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TPSSVIYHL_	ENSG00000142185|ENST00000397928|TRPM2;nc|ENSG00000142185|O94759-2|TRPM2;nc|ENSG00000142185|O94759-3|TRPM2;TRPM2|p.A177Gfs*92|1|0.52|ENSG00000142185|chr21:44366852-44366853|-/G|frameshift_variant;TRPM2|p.A177Pfs*6|1|0.43|ENSG00000142185|chr21:44366853-44366853|G/-|frameshift_variant;TRPM2|p.A785Rfs*17|1|0.49|ENSG00000142185|chr21:44401707-44401707|C/-|frameshift_variant;TRPM2|p.V508Cfs*3|1|0.06|ENSG00000142185|chr21:44391350-44391350|G/-|frameshift_variant	82.30502934623384	0.08758161712619916	6				NaN	NaN	0	NaN	11183	3816	14998
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15002	38.204	NaN	2314.5	30	0	511.48	0.106	+			45176	TVMGQLLVK	9	58	494.796836172453	987.5791194117061	2	494.7962341308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TVMGQLLVK_	ENSG00000105983|ENST00000353442|LMBR1;ENST00000434503.5_1_7:156480878-156685794:-|nuORF;ENST00000477983.1_1_7:156526850-156555826:-|nuORF;nc|ENSG00000105983|Q8WVP7-3|LMBR1	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	11184	3816	14998
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15003	38.206	NaN	900.6	30	0	299.93	0.106			+	11410	FLQLATSL	8	44	446.76007173874206	NaN	0	446.76025390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FLQLATSL_	REV__ENSG00000104973|ENST00000312865|MED25;REV__MED25|p.A202Gfs*197|1|0.36|ENSG00000104973|chr19:49829855-49829856|-/C|frameshift_variant;REV__MED25|p.P201Rfs*13|3|0.22|ENSG00000104973|chr19:49829856-49829856|C/-|frameshift_variant;REV__nc|ENSG00000104973|Q71SY5-4|MED25;REV__nc|ENSG00000104973|Q71SY5-5|MED25	35.61828744233558	1.7418937515398478	6				NaN	NaN	0	NaN	11185	3816	14998
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15004	38.208	NaN	3169	30	0	872.15	0.038			+	-1	GCLKDLNNPF	10	43	393.1952209472656	NaN	0	393.1952209472656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_GC(Carbamidomethyl (C))LKDLNNPF_	REV__ENSG00000128342|ENST00000249075|LIF	36.446750945000026	0.3805027428805705	6				NaN	NaN	0	NaN	11186	3816	14998
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15022	38.245	NaN	4398.2	30	0	688.68	0.214	+			1417	AEVVLAHL	8	52	426.25256244067947	NaN	0	426.2524108886719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEVVLAHL_	ENSG00000163902|ENST00000296255|RPN1;ENST00000481168.1_1_3:128363760-128369658:-|nuORF;ENST00000497415.1_1_3:128359957-128369658:-|nuORF	105.26878712358291	1.7418937515398478	6				NaN	NaN	0	NaN	11201	3819	15021
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15023	38.249	NaN	4428.6	30	0	409.88	0.106			+	31419	QKLQLVIQK	9	64	549.3558319250942	1096.6971109169883	2	549.3560791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QKLQLVIQK_	REV__CCBE1|p.T211I|1|0.3|ENSG00000183287|chr18:59454873-59454873|G/A|missense_variant	90.60085204095205	0.06317133949006545	6				NaN	NaN	0	NaN	11202	3819	15021
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15024	38.251	NaN	10251	30	0	5662.1	0.106			+	23953	LDSDLVLNY	9	54	526.2690142825796	1050.5234756319592	2	526.2693481445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LDSDLVLNY_	REV__ENSG00000179698|ENST00000323662|WDR97;REV__nc|ENSG00000179698|A6NE52-2|WDR97	55.50420428727701	0.2510918378945873	6				NaN	NaN	0	NaN	11203	3819	15021
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15025	38.253	NaN	4963	30	0	392.41	0.106	+			224	AALSYVLCK	9	72	484.2659937974617	NaN	0	484.2666320800781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AALSYVLCK_	ENSG00000161921|ENST00000293778|CXCL16	40.77816245573522	0.2702456086868081	6				NaN	NaN	0	NaN	11204	3819	15021
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15026	38.254	NaN	3762.8	30	0	322.5	0.106	+			11621	FPYGDASKF	9	67	516.2453226437042	1030.4760923542083	2	516.2449951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FPYGDASKF_	ENSG00000104490|ENST00000220931|NCALD;ENSG00000115756|ENST00000307845|HPCAL1;ENSG00000116983|ENST00000372844|HPCAL4;ENSG00000121905|ENST00000373467|HPCA;ENSG00000163032|ENST00000295156|VSNL1;HPCAL4|p.N75Efs*32|1|0.41|ENSG00000116983|chr1:39684093-39684094|-/T|frameshift_variant	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	11205	3819	15021
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15027	38.256	NaN	1611	30	0	257.84	0.035			+	8818	EELGRTGVY	9	62	512.2611554082245	NaN	0	512.2612915039062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EELGRTGVY_	REV__SAYSD1|p.P141L|1|0.23|ENSG00000112167|chr6:39105562-39105562|G/A|missense_variant	35.61828744233558	0.29773779453147337	6				NaN	NaN	0	NaN	11206	3819	15021
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15045	38.294	NaN	4470	30	0	934.98	0.214	+			46653	VGDPSVHLL	9	64	468.76109406447205	935.5076351957441	2	468.7606201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VGDPSVHLL_	ENSG00000099364|ENST00000338343|FBXL19;nc|ENSG00000099364|Q6PCT2-2|FBXL19;nc|ENSG00000099364|Q6PCT2-3|FBXL19;nc|ENSG00000099364|Q6PCT2|FBXL19	60.97194046774394	0.20551255781574032	6				NaN	NaN	0	NaN	11221	3822	15044
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15046	38.297	NaN	5385	30	0	1263.6	0.106	+			25324	LPCQQAARF	9	69	517.2639049875459	NaN	0	517.26416015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LPCQQAARF_	ENST00000446112.1_1_X:72989760-72990255:+|nuORF	65.80317337860623	0.12456833308499304	6				NaN	NaN	0	NaN	11222	3822	15044
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15047	38.3	NaN	1674.6	30	0	204.62	0.106	+			26655	LVEPQSQAL	9	50	492.7719248898042	983.5292968464084	2	492.7714538574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LVEPQSQAL_	ENSG00000166313|ENST00000609360|APBB1;ENST00000526925.6_1_11:6422737-6426086:-|nuORF;ENST00000529778.5_1_11:6422476-6423430:-|nuORF;ENST00000533407.6_1_11:6422737-6440257:-|nuORF;nc|ENSG00000166313|O00213-2|APBB1;nc|ENSG00000166313|O00213-3|APBB1;nc|ENSG00000166313|O00213-4|APBB1;nc|ENSG00000166313|O00213-5|APBB1;nc|ENSG00000166313|O00213-6|APBB1	60.11826168202944	0.21262886028301267	6				NaN	NaN	0	NaN	11223	3822	15044
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15048	38.301	NaN	4137.8	30	0	1510.7	0.106	+			30648	QATKLILNY	9	67	532.3115255559954	1062.6084981787908	2	532.3112182617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QATKLILNY_	ENSG00000196712|ENST00000358273|NF1;ENST00000493220.5_2_17:29552193-29556516:+|nuORF;ENST00000495910.6_1_17:29490228-29576996:+|nuORF;nc|ENSG00000196712|P21359-2|NF1;nc|ENSG00000196712|P21359-4|NF1;nc|ENSG00000196712|P21359-6|NF1;NF1|p.D946*|1|0.2|ENSG00000196712|chr17:31229444-31229445|-/T|frameshift_variant;NF1|p.F2429Qfs*7|1|0.17|ENSG00000196712|chr17:31349214-31349215|-/CAAGTAAGAATTAATT|frameshift_variant;NF1|p.K1386Rfs*20|1|0.33|ENSG00000196712|chr17:31252978-31252978|A/-|frameshift_variant	82.24051045832904	0.08786059719216216	6				NaN	NaN	0	NaN	11224	3822	15044
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15049	38.303	NaN	1616.9	30	0	256.05	0.106				-1	MKTVCGTPGY	10	57	536.7423706054688	NaN	0	536.7423706054688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_M(Oxidation (M))KTVCGTPGY_	ENSG00000152495|ENST00000282356|CAMK4;ENST00000505763.1_1_5:110693774-110785459:+|nuORF	34.172542307311794	0.38797011891751465	6				NaN	NaN	0	NaN	11225	3822	15044
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15050	38.305	NaN	1759.4	30	0	326.34	0.034			+	21027	KKKEGSLY	8	52	476.7768781356316	951.5392033380632	2	476.776123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KKKEGSLY_	REV__CDC23|p.L234Sfs*23|1|0.44|ENSG00000094880|chr5:138198737-138198738|-/A|frameshift_variant;REV__ENSG00000094880|ENST00000394886|CDC23;REV__ENST00000482948.5_1_5:137536747-137548896:-|nuORF;REV__nc|ENSG00000094880|Q9UJX2-3|CDC23	35.200714571348534	0.6875396545722289	6				NaN	NaN	0	NaN	11226	3822	15044
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15051	38.306	NaN	1604.7	30	0	224.3	0.14			+	8023	DTPLSPQATI	10	58	521.7743617922957	1041.5341706513914	2	521.272216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DTPLSPQATI_	REV__ENST00000575894.1_1_16:697728-698187:+|nuORF	49.536043120802724	0.461275219792494	6				NaN	NaN	0	NaN	11227	3822	15044
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15069	38.345	NaN	3764.2	30	0	703.26	0.214	+			40553	SVADLAFAH	9	57	465.7381063710082	929.4616598088164	2	465.7375793457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVADLAFAH_	EDC4|p.D801Mfs*15|1|0.26|ENSG00000038358|chr16:67880857-67880857|G/-|frameshift_variant;EDC4|p.Q792Sfs*24|1|0.37|ENSG00000038358|chr16:67880829-67880829|C/-|frameshift_variant;ENSG00000038358|ENST00000358933|EDC4;ENST00000536072.6_1_16:67909906-67914140:+|nuORF;ENST00000572221.5_1_16:67909733-67911757:+|nuORF	110.33723246496265	0.028653888678955353	6				NaN	NaN	0	NaN	11242	3825	15068
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15070	38.348	NaN	3561.7	30	0	427.52	0.106	+			14278	GSVELPIVGK	10	60	499.7979163226539	997.5812797121079	2	499.7977294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSVELPIVGK_	ENSG00000240849|ENST00000371652|PEDS1;ENST00000453505.6_1_20:48741597-48767785:-|nuORF	72.87924865735499	0.25379688738724415	6				NaN	NaN	0	NaN	11243	3825	15068
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15071	38.35	NaN	2790.7	30	0	284.52	0.106	+			6119	AVNSIFLSH	9	61	494.2662794195544	NaN	0	494.2667541503906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVNSIFLSH_	ENSG00000123146|ENST00000242786|ADGRE5;nc|ENSG00000123146|P48960-2|ADGRE5;nc|ENSG00000123146|P48960-3|ADGRE5	64.20726635412375	0.13137488984569443	6				NaN	NaN	0	NaN	11244	3825	15068
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15072	38.352	NaN	2198.4	30	0	233.38	0.106	+			27533	MPAEIVELH	9	63	519.7690543052731	1037.5235556773462	2	519.7689819335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MPAEIVELH_	ENSG00000100811|ENST00000262238|YY1;YY1|p.D231Rfs*3|1|0.34|ENSG00000100811|chr14:100262306-100262307|-/A|frameshift_variant	73.97473282117947	0.12360187025703594	6				NaN	NaN	0	NaN	11245	3825	15068
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15073	38.354	NaN	2352.6	30	0	1120	0.106				-1	 	0	46	372.7177462027408	743.4209394722816	2	372.7178649902344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11246	3825	15068
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15074	38.356	NaN	1501.4	30	0	148.41	0.033	+			36449	SEVKLSVL	8	56	437.76534586578794	NaN	0	437.76605224609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SEVKLSVL_	ENSG00000159267|ENST00000674895|HLCS;nc|ENSG00000159267|P50747|HLCS	56.72105179125745	1.7418937515398478	6				NaN	NaN	0	NaN	11247	3825	15068
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15092	38.392	NaN	2363.4	30	0	203.2	0.143	+			13589	GLVLEGGGMR	10	60	494.76540309565473	987.5162532581095	2	494.7615966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GLVLEGGGMR_	tr|U7SGA3|U7SGA3_FUSNUPNPLAdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02235PE=4SV=1	39.252832667884924	0.5560298534376815	6				NaN	NaN	0	NaN	11262	3828	15091
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15110	38.431	NaN	14150	30	0	2797.5	0.214	+			44327	TSFSEALLK	9	73	498.2742659781996	994.5339790231992	2	498.2740478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSFSEALLK_	ENSG00000143621|ENST00000361891|ILF2	132.757866228626	0.013877640931359021	6				NaN	NaN	0	NaN	11277	3831	15109
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15111	38.435	NaN	6091.3	30	0	807.66	0.106	+			251	AAMLDTVVFK	10	66	555.796408552118	1109.578264171036	2	555.7980346679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_AAM(Oxidation (M))LDTVVFK_	ENSG00000115233|ENST00000409682|PSMD14;ENST00000477232.5_1_2:162241962-162267908:+|nuORF;ENST00000492908.1_1_2:162265323-162267908:+|nuORF	101.25262130126117	0.07397688119410509	6				NaN	NaN	0	NaN	11278	3831	15109
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15112	38.437	NaN	4209.1	30	0	804.44	0.106	+			17504	IDFTGHAL	8	55	437.22695612838305	872.4393593235661	2	437.2268981933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IDFTGHAL_	ENSG00000057608|ENST00000380191|GDI2;ENSG00000203879|ENST00000447750|GDI1;ENST00000491154.1_1_X:153666748-153668487:+|nuORF;GDI2|p.S222Afs*20|1|0.1|ENSG00000057608|chr10:5785197-5785197|T/-|frameshift_variant;nc|ENSG00000057608|P50395-2|GDI2	88.64286706044652	0.2815785716369046	6				NaN	NaN	0	NaN	11279	3831	15109
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15113	38.439	NaN	1854.7	30	0	468.24	0.036			+	23270	KYKLIYSY	8	55	539.3011378110393	NaN	0	539.3024291992188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KYKLIYSY_	REV__ENSG00000174611|ENST00000423778|KY;REV__nc|ENSG00000174611|Q8NBH2-3|KY	47.91560031466742	1.7418937515398478	6				NaN	NaN	0	NaN	11280	3831	15109
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15131	38.476	NaN	24763	30	0	7016.1	0.214	+			40843	SVELPIVGK	9	73	471.2869011914166	940.5592494496332	2	471.28680419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVELPIVGK_	ENSG00000240849|ENST00000371652|PEDS1;ENST00000453505.6_1_20:48741597-48767785:-|nuORF	69.6276240434122	0.14239879520340665	6				NaN	NaN	0	NaN	11295	3834	15130
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15132	38.48	NaN	7012	30	0	947.71	0.106	+			3221	ASLADIMAK	9	70	460.2494707849415	918.484388636683	2	460.24932861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASLADIMAK_	ENSG00000114391|ENST00000394077|RPL24;ENST00000446071.1_1_9:72832122-72832404:+|nuORF	124.08010499294276	0.018729767491916592	6				NaN	NaN	0	NaN	11296	3834	15130
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15133	38.482	NaN	2199.3	30	0	168.57	0.106	+			33067	REKIVEVMF	9	68	575.8180369824763	1149.6215210317525	2	575.8189086914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_REKIVEVMF_	ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2	24.519189625965996	0.574102787014149	6				NaN	NaN	0	NaN	11297	3834	15130
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15134	38.484	NaN	1389.9	30	0	330.25	0.036			+	28413	NESVLKIIF	9	55	531.8142700195312	NaN	0	531.8142700195312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NESVLKIIF_	REV__tr|U7SKT8|U7SKT8_FUSNUReversetranscriptasedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01930PE=4SV=1	35.61828744233558	0.29773779453147337	6				NaN	NaN	0	NaN	11298	3834	15130
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15152	38.52	NaN	2310.6	30	0	427.94	0.214			+	23637	LAQNFNEVM	9	60	533.2553145603198	1064.4960761874395	2	533.255615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LAQNFNEVM_	REV__ENSG00000135441|ENST00000548925|BLOC1S1;REV__nc|ENSG00000135441|P78537-2|BLOC1S1	42.396135135203025	0.392153681582562	6				NaN	NaN	0	NaN	11313	3837	15151
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15153	38.523	NaN	2125.9	30	0	367.99	0.106				-1	VGMSKEAVR	9	55	509.77307792121496	NaN	0	509.7727966308594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))VGMSKEAVR_	ENSG00000172819|ENST00000425354|RARG;ENST00000548317.1_1_12:53607836-53609095:-|nuORF;ENST00000550265.5_1_12:53607169-53614138:-|nuORF;nc|ENSG00000172819|P13631-2|RARG;nc|ENSG00000172819|P13631-3|RARG;nc|ENSG00000172819|P13631-4|RARG;RARG|p.E152K|1|0.2|ENSG00000172819|chr12:53215314-53215314|C/T|missense_variant;RARG|p.P281Qfs*6|1|0.29|ENSG00000172819|chr12:53213672-53213672|G/-|frameshift_variant	47.95952297671804	0.22075498469600283	6				NaN	NaN	0	NaN	11314	3837	15151
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15154	38.525	NaN	1774.6	30	0	833.61	0.106			+	-1	QRAAAIVWFC	10	39	611.3137817382812	NaN	0	611.3137817382812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_QRAAAIVWFC(Carbamidomethyl (C))_	REV__ABCB11|p.A384Cfs*12|1|0.09|ENSG00000073734|chr2:168979913-168979914|-/A|frameshift_variant;REV__ABCB11|p.K1070Nfs*27|1|0.17|ENSG00000073734|chr2:168932380-168932380|T/-|frameshift_variant;REV__ABCB11|p.Q1053Nfs*44|1|0.2|ENSG00000073734|chr2:168932434-168932434|A/-|frameshift_variant;REV__ABCB11|p.V1293Wfs*2|2|0.26|ENSG00000073734|chr2:168923711-168923711|C/-|frameshift_variant;REV__ENSG00000073734|ENST00000650372|ABCB11	12.206847966760668	0.4201028297492154	6				NaN	NaN	0	NaN	11315	3837	15151
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15155	38.527	NaN	4214.9	30	0	693.31	0.106			+	24550	LGLRRQFY	8	70	526.8029909282109	1051.5914289232217	2	526.8030395507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LGLRRQFY_	REV__ENSG00000147100|ENST00000587091|SLC16A2	35.200714571348534	0.6875396545722289	6				NaN	NaN	0	NaN	11316	3837	15151
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15156	38.529	NaN	1553.7	30	0	391.2	0.106			+	23936	LDQDLIFL	8	56	488.77096641907497	975.52737990495	2	488.7601623535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LDQDLIFL_	REV__ENST00000374935.7_1_1:21299544-21306919:-|nuORF	53.351449002276354	0.5676011784961348	6				NaN	NaN	0	NaN	11317	3837	15151
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15157	38.531	NaN	342.83	30	0	48.374	0.033				-1	RCSPVWIMCL	10	30	441.2125549316406	NaN	0	441.2125549316406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Carbamidomethyl (C)	_RC(Carbamidomethyl (C))SPVWIMC(Carbamidomethyl (C))L_	ENST00000375663.7_1_6:31748338-31748531:-|nuORF	16.71738777980365	0.4201028297492154	6				NaN	NaN	0	NaN	11318	3837	15151
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15158	38.531	NaN	854.01	30	0	62.708	0.138				-1	VLRMGPPL	8	44	449.7623291015625	NaN	0	449.7623291015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_VLRM(Oxidation (M))GPPL_	nc|ENSG00000012660|Q9NYP7-3|ELOVL5	46.76643321282427	1.7418937515398478	6				NaN	NaN	0	NaN	11319	3837	15151
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15176	38.57	NaN	5861.6	30	0	782.84	0.214			+	9707	EMKDLGGDLP	10	71	537.7600218233656	1073.5054907135311	2	537.7606201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EMKDLGGDLP_	REV__ENSG00000173193|ENST00000474629|PARP14;REV__nc|ENSG00000173193|Q460N5-4|PARP14;REV__PARP14|p.N1416Efs*19|1|0.2|ENSG00000173193|chr3:122718388-122718389|-/A|frameshift_variant;REV__PARP14|p.N415Mfs*3|1|0.05|ENSG00000173193|chr3:122699793-122699793|A/-|frameshift_variant	75.04331003522576	0.23611669241777622	6				NaN	NaN	0	NaN	11334	3840	15175
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15177	38.574	NaN	3580.1	30	0	568.84	0.106	+			33206	RFEEAHFTF	9	55	592.2801160849683	1182.5456792367365	2	592.2803955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RFEEAHFTF_	ENSG00000131788|ENST00000393045|PIAS3;ENST00000369299.7_1_1:145575401-145580415:+|nuORF;ENST00000498436.2_1_1:145578572-145580415:+|nuORF;PIAS3|p.L222Cfs*56|1|0.24|ENSG00000131788|chr1:145855741-145855741|G/-|frameshift_variant	42.86426827375447	0.38666266728046506	6				NaN	NaN	0	NaN	11335	3840	15175
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15178	38.576	NaN	1431.5	30	0	141.67	0.106				-1	AIMKQMLI	8	56	490.26751708984375	NaN	0	490.26751708984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Oxidation (M)	_AIM(Oxidation (M))KQM(Oxidation (M))LI_	ENSG00000196782|ENST00000509479|MAML3	44.53106598305862	1.7418937515398478	6				NaN	NaN	0	NaN	11336	3840	15175
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15179	38.578	NaN	2551.9	30	0	220.55	0.106			+	-1	AMCSWIRY	8	62	523.2330488600394	1044.4515447868787	2	523.2332153320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_AM(Oxidation (M))CSWIRY_	REV__ENST00000264028.4_1_11:118461093-118461138:+|nuORF	40.5726180659479	0.6527593143185008	6				NaN	NaN	0	NaN	11337	3840	15175
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15180	38.58	NaN	1557.6	30	0	202.96	0.106			+	7988	DSYVLYVPF	9	63	551.7742309570312	NaN	0	551.7742309570312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DSYVLYVPF_	REV__ENSG00000010322|ENST00000345716|NISCH;REV__ENST00000489895.5_1_3:52514938-52524786:+|nuORF;REV__nc|ENSG00000010322|Q9Y2I1-2|NISCH;REV__NISCH|p.T1019Rfs*140|1|0.14|ENSG00000010322|chr3:52488539-52488539|C/-|frameshift_variant	35.200714571348534	0.2998460331538257	6				NaN	NaN	0	NaN	11338	3840	15175
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15181	38.581	NaN	1679.4	30	0	231.73	0.106	+			40862	SVFEDPVISK	10	52	560.7977174111553	1119.5808818891105	2	560.7985229492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVFEDPVISK_	ENSG00000125445|ENST00000245539|MRPS7;MRPS7|p.L162Pfs*29|1|0.05|ENSG00000125445|chr17:75263482-75263483|-/C|frameshift_variant	33.921630207806714	0.6028135429846169	6				NaN	NaN	0	NaN	11339	3840	15175
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15182	38.583	NaN	2317.2	30	0	313.12	0.035			+	9698	EMEKQMGAL	9	53	518.7433995802214	1035.4722462272427	2	518.7437744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EMEKQMGAL_	REV__ENSG00000156232|ENST00000286760|WHAMM	68.78682469695295	0.14603441672067394	6				NaN	NaN	0	NaN	11340	3840	15175
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15200	38.621	NaN	2738.8	30	0	594.11	0.214			+	26191	LSRSTVTDE	9	59	504.25416706973226	1006.4937812062645	2	504.2543640136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSRSTVTDE_	REV__ENSG00000182150|ENST00000653738|ERCC6L2	45.9519527083369	0.35044536499095585	6				NaN	NaN	0	NaN	11355	3843	15199
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15201	38.624	NaN	2256.9	30	0	294.45	0.106	+			45044	TVGGFALSIKG	11	63	525.3017704541309	1048.5889879750616	2	525.3033447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVGGFALSIKG_	SNTG1|p.G69A|1|0.18|ENSG00000147481|chr8:50438586-50438586|G/C|missense_variant	36.446750945000026	0.6065623449959539	6				NaN	NaN	0	NaN	11356	3843	15199
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15202	38.626	NaN	2342	30	0	490.45	0.106			+	46112	VDGLAVVKF	9	56	474.2814058292634	946.5482587253268	2	474.2810363769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VDGLAVVKF_	REV__ENSG00000020633|ENST00000308873|RUNX3;REV__ENSG00000159216|ENST00000675419|RUNX1;REV__nc|ENSG00000020633|Q13761-2|RUNX3;REV__nc|ENSG00000159216|Q01196-10|RUNX1;REV__nc|ENSG00000159216|Q01196-2|RUNX1;REV__nc|ENSG00000159216|Q01196-3|RUNX1;REV__nc|ENSG00000159216|Q01196-4|RUNX1;REV__nc|ENSG00000159216|Q01196-5|RUNX1;REV__nc|ENSG00000159216|Q01196-6|RUNX1;REV__nc|ENSG00000159216|Q01196-7|RUNX1;REV__nc|ENSG00000159216|Q01196-9|RUNX1;REV__nc|ENSG00000159216|Q01196|RUNX1;REV__RUNX1-PROS1|1|fusion;REV__RUNX1-PROS1|2|fusion;REV__RUNX1|p.S145Afs*4|1|0.18|ENSG00000159216|chr21:34859573-34859573|T/-|frameshift_variant	65.80317337860623	0.1652391959156183	6				NaN	NaN	0	NaN	11357	3843	15199
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15203	38.628	NaN	1416.2	30	0	87.091	0.106	+			28725	NNNNFQSK	8	54	483.2249872572767	NaN	0	483.2248840332031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NNNNFQSK_	ENSG00000101448|ENST00000354280|EPPIN;nc|ENSG00000249139|O95925-2|EPPIN;nc|ENSG00000249139|O95925-3|EPPIN	44.116797842482775	1.7418937515398478	6				NaN	NaN	0	NaN	11358	3843	15199
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15204	38.63	NaN	1280.1	30	0	99.676	0.106			+	38972	SSRSMISII	9	62	497.2728005202679	992.5310481073358	2	497.2716064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSRSMISII_	REV__ENSG00000184811|ENST00000333813|TRARG1	44.377184641726394	0.36891676396732553	6				NaN	NaN	0	NaN	11359	3843	15199
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15205	38.632	NaN	1525	30	0	224.31	0.106			+	32500	QVQAQAAL	8	35	414.73236128425503	NaN	0	414.7321472167969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QVQAQAAL_	REV__ENSG00000113649|ENST00000679501|TCERG1;REV__ENST00000507175.5_1_5:145826912-145859658:+|nuORF;REV__nc|ENSG00000113649|O14776-2|TCERG1;REV__nc|ENSG00000113649|O14776|TCERG1;REV__TCERG1|p.I983Nfs*3|1|0.36|ENSG00000113649|chr5:146507901-146507902|-/A|frameshift_variant;REV__TCERG1|p.I983Sfs*41|1|0.35|ENSG00000113649|chr5:146507902-146507902|A/-|frameshift_variant;REV__TCERG1|p.K627Nfs*37|1|0.1|ENSG00000113649|chr5:146480083-146480083|A/-|frameshift_variant;REV__TCERG1|p.K957Rfs*17|1|0.28|ENSG00000113649|chr5:146507160-146507160|A/-|frameshift_variant;REV__TCERG1|p.M735Nfs*8|1|0.26|ENSG00000113649|chr5:146493003-146493004|-/A|frameshift_variant	44.53106598305862	1.7418937515398478	6				NaN	NaN	0	NaN	11360	3843	15199
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15206	38.634	NaN	3996.2	30	0	803.55	0.034	+			11076	FETFNTPA	8	55	463.7162414058603	925.4179298785206	2	463.7158508300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FETFNTPA_	ACTB|p.M132T|1|0.15|ENSG00000075624|chr7:5528688-5528688|A/G|missense_variant;ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196604|ENST00000409914|POTEF;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000403258.1_1_6:88986231-88986483:-|nuORF;ENST00000415776.1_1_Y:19869357-19869702:-|nuORF;ENST00000418987.2_1_9:103493819-103494230:+|nuORF;ENST00000428275.1_1_X:53172669-53172729:-|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000570019.1_1_15:34666200-34666557:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENST00000587663.1_1_18:60109485-60109668:+|nuORF;nc|ENSG00000204434|Q9BYX7|POTEKP	73.97473282117947	0.3737790450121076	6				NaN	NaN	0	NaN	11361	3843	15199
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15224	38.671	NaN	5635.2	30	0	605.98	0.214	+			28871	NPYSGDLTKF	10	68	571.2802857219701	1140.5460185107402	2	571.2805786132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NPYSGDLTKF_	ENSG00000143569|ENST00000428931|UBAP2L;nc|ENSG00000143569|Q14157-1|UBAP2L;nc|ENSG00000143569|Q14157-3|UBAP2L;nc|ENSG00000143569|Q14157-4|UBAP2L;nc|ENSG00000143569|Q14157-5|UBAP2L	128.3478880297481	0.01553957493207534	6				NaN	NaN	0	NaN	11376	3846	15223
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15225	38.675	NaN	5380.9	30	0	675.77	0.106	+			44524	TSVGYAIFK	9	66	493.2712103049256	984.5278676766512	2	493.2708740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TSVGYAIFK_	ENSG00000055044|ENST00000264279|NOP58;ENST00000467734.5_1_2:203130664-203142690:+|nuORF;ENST00000472050.5_1_2:203130664-203149064:+|nuORF;ENST00000488403.5_1_2:203130664-203149205:+|nuORF;ENST00000492740.5_1_2:203130664-203139913:+|nuORF	134.81075121484326	0.012914550297035062	6				NaN	NaN	0	NaN	11377	3846	15223
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15226	38.677	NaN	2486.4	30	0	238.81	0.106	+			42498	TANSIMASY	9	55	479.2208472450511	956.4271415569023	2	479.220458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TANSIMASY_	ENSG00000070061|ENST00000374647|ELP1	82.7504851949679	0.08565546331141553	6				NaN	NaN	0	NaN	11378	3846	15223
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15227	38.678	NaN	4220.2	30	0	1540.6	0.106	+			33364	RHPDVQGRVQ	10	52	596.3213380027584	1190.6281230723166	2	596.3214721679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RHPDVQGRVQ_	ENSG00000073067|ENST00000308919|CYP2W1	32.81241826257853	0.6118718159329168	6				NaN	NaN	0	NaN	11379	3846	15223
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15228	38.68	NaN	2809.1	30	0	421.93	0.106	+			2453	APLDSIHSL	9	65	476.75860231883576	951.5026517044715	2	476.75848388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_APLDSIHSL_	ENSG00000169710|ENST00000306749|FASN	51.33545320467046	0.2872990594074956	6				NaN	NaN	0	NaN	11380	3846	15223
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15229	38.682	NaN	2207	30	0	375.51	0.035	+			10443	EVLLCLFK	8	64	511.2919317859157	1020.5693106386315	2	511.2917785644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_EVLLC(Carbamidomethyl (C))LFK_	ENSG00000107290|ENST00000224140|SETX;nc|ENSG00000107290|Q7Z333-3|SETX;nc|ENSG00000107290|Q7Z333-4|SETX;SETX|p.F1748Sfs*3|1|0.55|ENSG00000107290|chr9:132326355-132326355|A/-|frameshift_variant;SETX|p.G1134Efs*24|1|0.34|ENSG00000107290|chr9:132328199-132328199|T/-|frameshift_variant;SETX|p.G1252Dfs*9|2|0.2|ENSG00000107290|chr9:132327843-132327843|C/-|frameshift_variant;SETX|p.I2020Nfs*4|1|0.32|ENSG00000107290|chr9:132295919-132295920|-/T|frameshift_variant;SETX|p.N1361Ifs*53|1|0.11|ENSG00000107290|chr9:132327516-132327516|T/-|frameshift_variant;SETX|p.S1600*|1|0.07|ENSG00000107290|chr9:132326800-132326801|-/A|frameshift_variant;SETX|p.T2478Sfs*35|1|0.35|ENSG00000107290|chr9:132264836-132264840|TATGG/-|frameshift_variant	47.91560031466742	0.6071945918984287	6				NaN	NaN	0	NaN	11381	3846	15223
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15230	38.683	NaN	1826.4	30	0	266.03	0.138	+			46290	VEIAKVAI	8	55	421.77101235465636	841.5274717761127	2	421.770751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VEIAKVAI_	ENSG00000249437|ENST00000517649|NAIP;ENST00000315147.8_1_5:70265933-70281744:-|nuORF;ENST00000511830.2_1_5:69390488-69422514:-|nuORF;nc|ENSG00000249437|Q13075-2|NAIP	54.776311868738084	0.5534952410049249	6				NaN	NaN	0	NaN	11382	3846	15223
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15248	38.722	NaN	5951.8	30	0	626.61	0.214	+			14279	GSVELPIVGK	10	66	499.7979163226539	997.5812797121079	2	499.79742431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSVELPIVGK_	ENSG00000240849|ENST00000371652|PEDS1;ENST00000453505.6_1_20:48741597-48767785:-|nuORF	85.16082228582465	0.15877915086237185	6				NaN	NaN	0	NaN	11397	3849	15247
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15249	38.726	NaN	3143.9	30	0	431.93	0.106			+	-1	CTPALAQEL	9	64	501.7492208861011	1001.4838888390022	2	501.7494201660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_C(Carbamidomethyl (C))TPALAQEL_	REV__ENST00000361028.5_1_6:28349926-28350043:-|nuORF;REV__ENST00000396827.3_1_6:28348556-28350043:-|nuORF	54.776311868738084	0.25715957988447635	6				NaN	NaN	0	NaN	11398	3849	15247
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15250	38.728	NaN	2154.1	30	0	728.71	0.106			+	-1	ALLRVMKM	8	61	489.2868238741039	976.5590948150078	2	489.286865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_ALLRVMKM(Oxidation (M))_	REV__TELO2|p.A121V|1|0.13|ENSG00000100726|chr16:1495372-1495372|C/T|missense_variant	52.29916861842294	0.578018602984656	6				NaN	NaN	0	NaN	11399	3849	15247
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15251	38.729	NaN	1486.1	30	0	239.15	0.106				-1	 	0	46	408.7465567825443	815.4785606318886	2	408.7461853027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11400	3849	15247
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15252	38.731	NaN	2618.6	30	0	184.85	0.106			+	27002	LYQGMSLP	8	55	454.7305992924437	907.4466456516874	2	454.73046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LYQGMSLP_	REV__ENSG00000010818|ENST00000367603|HIVEP2;REV__HIVEP2|p.E2269Sfs*37|1|0.07|ENSG00000010818|chr6:142753643-142753643|C/-|frameshift_variant;REV__HIVEP2|p.N2325Kfs*44|1|0.35|ENSG00000010818|chr6:142753473-142753474|-/T|frameshift_variant	79.9392285194092	0.32408006123154964	6				NaN	NaN	0	NaN	11401	3849	15247
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15253	38.733	NaN	1188.7	30	0	79.29	0.035	+			29671	PGQAGLMQTE	10	59	516.2453226437042	1030.4760923542083	2	516.2449340820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PGQAGLMQTE_	ENSG00000139971|ENST00000267485|ARMH4;ENST00000334342.5_1_14:58583046-58606076:-|nuORF;ENST00000557175.5_1_14:58600041-58605929:-|nuORF;nc|ENSG00000139971|Q86TY3-2|ARMH4	39.252832667884924	0.5560298534376815	6				NaN	NaN	0	NaN	11402	3849	15247
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15254	38.734	NaN	1515.1	30	0	201.82	0.139	+			37032	SIQTSVNAL	9	53	466.75604326152984	931.4975335898597	2	466.7565002441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SIQTSVNAL_	ENSG00000135624|ENST00000258091|CCT7;nc|ENSG00000135624|Q99832-2|CCT7;nc|ENSG00000135624|Q99832-3|CCT7;nc|ENSG00000135624|Q99832-4|CCT7	63.53385203322761	0.18415635464017938	6				NaN	NaN	0	NaN	11403	3849	15247
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15272	38.773	NaN	4187.6	30	0	605.58	0.214			+	36507	SFCRARNGV	9	65	505.25326094926953	1008.4919689653391	2	505.25286865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SFCRARNGV_	REV__nc|ENSG00000109685|O96028-2|NSD2	51.33545320467046	0.2872990594074956	6				NaN	NaN	0	NaN	11418	3852	15271
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15273	38.777	NaN	4053.8	30	0	871.85	0.106	+			32090	QSFFTITQK	9	62	550.2928886173243	1098.5712243014484	2	550.2932739257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QSFFTITQK_	ENSG00000177084|ENST00000320574|POLE;ENST00000534922.5_1_12:133202008-133209092:-|nuORF;ENST00000537064.5_1_12:133201285-133234573:-|nuORF	47.95952297671804	0.32689736945648856	6				NaN	NaN	0	NaN	11419	3852	15271
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15274	38.779	NaN	3086.6	30	0	1325.1	0.106	+			30802	QEALKYTVL	9	61	532.8027865129925	1063.591020092785	2	532.8034057617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QEALKYTVL_	ENSG00000162542|ENST00000294543|TMCO4;nc|ENSG00000162542|Q5TGY1-2|TMCO4;TMCO4|p.F412Lfs*180|1|0.26|ENSG00000162542|chr1:19737399-19737400|AG/-|frameshift_variant	69.6276240434122	0.14239879520340665	6				NaN	NaN	0	NaN	11420	3852	15271
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15275	38.78	NaN	859.77	30	0	114.8	0.106			+	5610	AVCIFLHF	8	52	475.2528076171875	NaN	0	475.2528076171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVCIFLHF_	REV__ENSG00000167291|ENST00000310924|TBC1D16;REV__nc|ENSG00000167291|Q8TBP0-2|TBC1D16;REV__nc|ENSG00000167291|Q8TBP0-4|TBC1D16	43.626045697637714	1.7418937515398478	6				NaN	NaN	0	NaN	11421	3852	15271
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15276	38.782	NaN	1262.4	30	0	131.08	0.04			+	-1	YKIQLAEKGMI	11	49	437.24487325343324	NaN	0	437.51800537109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_YKIQLAEKGM(Oxidation (M))I_	REV__ENSG00000106804|ENST00000223642|C5	27.64392233501311	0.4422187622456888	6				NaN	NaN	0	NaN	11422	3852	15271
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15294	38.82	NaN	15527	30	0	5243.1	0.214	+			40844	SVELPIVGK	9	60	471.2869011914166	940.5592494496332	2	471.2867126464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVELPIVGK_	ENSG00000240849|ENST00000371652|PEDS1;ENST00000453505.6_1_20:48741597-48767785:-|nuORF	71.87747018426188	0.13267044672804276	6				NaN	NaN	0	NaN	11437	3855	15293
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15295	38.823	NaN	5393	30	0	576.09	0.106	+			25557	LPWASTHSL	9	70	506.26643304838024	1010.5183131635605	2	506.2662658691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LPWASTHSL_	ENSG00000170915|ENST00000442253|PAQR8;PAQR8|p.F163Sfs*45|1|0.32|ENSG00000170915|chr6:52403699-52403702|TTTC/-|frameshift_variant	65.80317337860623	0.1652391959156183	6				NaN	NaN	0	NaN	11438	3855	15293
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15296	38.825	NaN	4100.3	30	0	824.7	0.106	+			33793	RQGQHLLLG	9	61	511.2998510852391	1020.5851492372782	2	511.2995910644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RQGQHLLLG_	ENST00000306801.7_1_17:78899237-78923276:+|nuORF	50.0245360154114	0.3026755932229825	6				NaN	NaN	0	NaN	11439	3855	15293
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15297	38.827	NaN	1959.3	30	0	304.12	0.106				-1	 	0	44	378.7358698695159	755.4571868058318	2	378.735595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11440	3855	15293
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15298	38.829	NaN	1698.4	30	0	188	0.035	+			44350	TSGVLVVLTK	10	61	508.82109076048556	NaN	0	508.8228454589844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TSGVLVVLTK_	CNNM4|p.L438Pfs*9|1|0.32|ENSG00000158158|chr2:96762305-96762306|-/C|frameshift_variant;ENSG00000158158|ENST00000377075|CNNM4	53.08895987439943	0.2860736266326207	6				NaN	NaN	0	NaN	11441	3855	15293
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15316	38.867	NaN	9032.5	30	0	3715.9	0.214	+			44917	TVAGLALIK	9	61	443.29214941067056	884.5697458881411	2	443.2918701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVAGLALIK_	ENSG00000105835|ENST00000222553|NAMPT;ENST00000467730.1_1_7:105908908-105909650:-|nuORF;ENST00000491027.5_1_7:105903822-105925330:-|nuORF	113.41158876095287	0.025516849225023126	6				NaN	NaN	0	NaN	11456	3858	15315
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15317	38.87	NaN	2147.1	30	0	168.49	0.106	+			37569	SLMSALAAR	9	52	460.2555998393186	918.4966467454373	2	460.2546081542969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLMSALAAR_	ENSG00000065911|ENST00000394053|MTHFD2;ENST00000477455.5_1_2:74425768-74433128:+|nuORF;ENST00000488086.1_1_2:74425768-74433063:+|nuORF	72.87924865735499	0.12833875048249987	6				NaN	NaN	0	NaN	11457	3858	15315
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15318	38.872	NaN	2192.7	30	0	680.02	0.106			+	-1	KEELSCRI	8	56	517.7674998259296	1033.520446718659	2	517.767333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_KEELSC(Carbamidomethyl (C))RI_	REV__nc|ENSG00000095627|Q9BXT4-4|TDRD1	54.776311868738084	0.5534952410049249	6				NaN	NaN	0	NaN	11458	3858	15315
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15319	38.874	NaN	1494.2	30	0	155.33	0.106	+			41901	SVVAVLVYK	9	59	489.30517759512736	NaN	0	489.3048095703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVVAVLVYK_	ENSG00000136869|ENST00000355622|TLR4;nc|ENSG00000136869|O00206-2|TLR4;nc|ENSG00000136869|O00206-3|TLR4	31.529811441608018	0.3183796599642538	6				NaN	NaN	0	NaN	11459	3858	15315
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15320	38.876	NaN	4175.1	30	0	1132.3	0.033	+			3098	ASGGIFVLK	9	57	446.2686340763313	890.5227152194626	2	446.2687683105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASGGIFVLK_	ENSG00000030066|ENST00000378460|NUP160;ENST00000526870.1_3_11:47861380-47861614:-|nuORF;nc|ENSG00000030066|Q12769|NUP160	134.81075121484326	0.012914550297035062	6				NaN	NaN	0	NaN	11460	3858	15315
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15338	38.913	NaN	5881.3	30	0	887.88	0.214	+			37955	SPFKADIEM	9	65	519.2521099891434	1036.4896670450867	2	519.2520751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SPFKADIEM_	ENSG00000136068|ENST00000295956|FLNB;FLNB|p.G1596Vfs*33|1|0.36|ENSG00000136068|chr3:58136090-58136090|G/-|frameshift_variant;nc|ENSG00000136068|O75369-2|FLNB;nc|ENSG00000136068|O75369-3|FLNB;nc|ENSG00000136068|O75369-4|FLNB;nc|ENSG00000136068|O75369-5|FLNB;nc|ENSG00000136068|O75369-6|FLNB;nc|ENSG00000136068|O75369-7|FLNB;nc|ENSG00000136068|O75369-8|FLNB;nc|ENSG00000136068|O75369-9|FLNB	77.31757898189308	0.1091473830098891	6				NaN	NaN	0	NaN	11475	3861	15337
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15339	38.917	NaN	8875.7	30	0	1752.5	0.106	+			38724	SSLFSLLSK	9	68	491.2847237396892	980.5548945461784	2	491.28448486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSLFSLLSK_	ENSG00000141627|ENST00000675505|DYM	127.46168284122857	0.016682644177004526	6				NaN	NaN	0	NaN	11476	3861	15337
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15340	38.919	NaN	2600.6	30	0	346.67	0.106			+	18642	ISTNNYVLV	9	66	511.7792341153501	1021.5439152975002	2	511.7793884277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ISTNNYVLV_	REV__ENSG00000171453|ENST00000642195|POLR1C;REV__ENST00000481352.6_1_6:43484832-43487644:+|nuORF;REV__nc|ENSG00000171453|O15160-2|POLR1C	51.33545320467046	0.2872990594074956	6				NaN	NaN	0	NaN	11477	3861	15337
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15341	38.921	NaN	1848.4	30	0	484.05	0.106			+	8102	DYGDKHSRY	9	50	570.757233177018	1139.4999134208358	2	570.7572631835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DYGDKHSRY_	REV__ENSG00000165097|ENST00000650836|KDM1B;REV__KDM1B|p.E545Gfs*8|1|0.11|ENSG00000165097|chr6:18217825-18217826|-/G|frameshift_variant;REV__KDM1B|p.I116Yfs*48|1|0.14|ENSG00000165097|chr6:18166301-18166301|A/-|frameshift_variant;REV__nc|ENSG00000165097|Q8NB78-2|KDM1B	27.882242232435846	0.5426732730940306	6				NaN	NaN	0	NaN	11478	3861	15337
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15342	38.923	NaN	2163.5	30	0	475.88	0.106	+			41416	SVNDLTLLK	9	57	501.79533269005657	1001.5761124469132	2	501.79510498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVNDLTLLK_	ENSG00000107104|ENST00000382297|KANK1;ENST00000354485.5_1_9:676972-730286:+|nuORF;ENST00000489369.5_1_9:676972-732786:+|nuORF;nc|ENSG00000107104|Q14678-2|KANK1	45.02220120713402	0.3613509778819777	6				NaN	NaN	0	NaN	11479	3861	15337
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15343	38.925	NaN	2974	30	0	1388.3	0.034	+			513	ACLSISAAIL	10	48	481.2719117025636	960.5292704719272	2	481.2702331542969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ACLSISAAIL_	ENSG00000008838|ENST00000394128|MED24;MED24|p.E720Gfs*14|1|0.41|ENSG00000008838|chr17:40023224-40023225|-/A|frameshift_variant;MED24|p.K704Sfs*8|1|0.18|ENSG00000008838|chr17:40023272-40023272|G/-|frameshift_variant;MED24|p.P805Rfs*53|1|0.29|ENSG00000008838|chr17:40022663-40022663|G/-|frameshift_variant;nc|ENSG00000008838|O75448-2|MED24;THRA-MED24|1|fusion	44.116797842482775	0.5112108506279902	6				NaN	NaN	0	NaN	11480	3861	15337
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15344	38.925	NaN	1268	30	0	114.2	0.138	+			15695	GVNAIVYM	8	48	433.725495814148	NaN	0	433.7250671386719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GVNAIVYM_	ENSG00000134108|ENST00000256496|ARL8B;ENST00000455168.5_1_3:5164021-5220395:+|nuORF;nc|ENSG00000134108|Q9NVJ2-2|ARL8B	39.021493756699265	1.7418937515398478	6				NaN	NaN	0	NaN	11481	3861	15337
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15362	38.964	NaN	7056.2	30	0	989.12	0.214	+			11986	FVQGIFVEK	9	67	533.8009020865534	1065.5872512399067	2	533.8011474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FVQGIFVEK_	ENSG00000116473|ENST00000369709|RAP1A;ENSG00000127314|ENST00000250559|RAP1B;ENST00000460800.5_1_12:69042504-69044290:+|nuORF;ENST00000494982.1_1_1:112233982-112249293:+|nuORF;nc|ENSG00000127314|P61224-2|RAP1B;nc|ENSG00000127314|P61224-3|RAP1B;nc|ENSG00000254893|A6NIZ1|RAP1BL	72.2432373244024	0.13108886737667413	6				NaN	NaN	0	NaN	11496	3864	15361
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15363	38.967	NaN	2185.6	30	0	180.31	0.106	+			35397	SAQLVWISK	9	64	516.2980936848369	NaN	0	516.2981567382812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAQLVWISK_	ENST00000398529.7_1_2:65325145-65331914:-|nuORF	55.08391021199286	0.17165699430885212	6				NaN	NaN	0	NaN	11497	3864	15361
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15364	38.969	NaN	3348	30	0	549.77	0.106	+			43260	TEYTFTHL	8	61	506.2432042094715	1010.471855485743	2	506.2436218261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TEYTFTHL_	ENSG00000075420|ENST00000415807|FNDC3B;FNDC3B|p.T1056Hfs*16|1|0.43|ENSG00000075420|chr3:172378419-172378420|-/C|frameshift_variant	71.29570347882199	0.39610197767395533	6				NaN	NaN	0	NaN	11498	3864	15361
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15365	38.971	NaN	1733	30	0	378.94	0.034	+			2507	APTSSAYEF	9	53	486.71947853200453	971.4244041308091	2	486.718994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_APTSSAYEF_	ENSG00000104973|ENST00000312865|MED25;ENST00000593636.1_1_19:50321571-50322554:+|nuORF;MED25|p.A202Gfs*197|1|0.36|ENSG00000104973|chr19:49829855-49829856|-/C|frameshift_variant;MED25|p.P201Rfs*13|3|0.22|ENSG00000104973|chr19:49829856-49829856|C/-|frameshift_variant;nc|ENSG00000104973|Q71SY5-4|MED25;nc|ENSG00000104973|Q71SY5-5|MED25	60.97194046774394	0.20551255781574032	6				NaN	NaN	0	NaN	11499	3864	15361
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15383	39.009	NaN	8186.9	30	0	1312.6	0.214	+			48497	VTNDFVMLK	9	70	533.7840388876559	1065.5535248421118	2	533.783935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTNDFVMLK_	ENSG00000100316|ENST00000216146|RPL3;ENST00000417615.1_1_14:99439218-99439536:-|nuORF;ENST00000473638.5_1_22:39708982-39709710:-|nuORF	106.68306549817024	0.032382560583716295	6				NaN	NaN	0	NaN	11514	3867	15382
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15384	39.012	NaN	4205.2	30	0	454.19	0.106	+			35559	SAVTALWGK	9	58	466.763684437281	931.512815941362	2	466.76336669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAVTALWGK_	ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF	77.31757898189308	0.1091473830098891	6				NaN	NaN	0	NaN	11515	3867	15382
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15385	39.014	NaN	4050.9	30	0	880.73	0.106	+			25339	LPDTLKVTY	9	67	525.2978149340623	1048.5810769349246	2	525.2978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LPDTLKVTY_	ENSG00000160255|ENST00000652462|ITGB2;ENST00000475170.5_1_21:46306285-46313576:-|nuORF;ENST00000498666.5_1_21:46313282-46313576:-|nuORF	123.20810148215591	0.019257656778428764	6				NaN	NaN	0	NaN	11516	3867	15382
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15386	39.016	NaN	2029.8	30	0	314.17	0.106	+			1496	AFSLPSPTF	9	57	483.74830943707997	965.48206594096	2	483.74798583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AFSLPSPTF_	ENST00000588926.5_1_19:44617677-44619969:+|nuORF	53.351449002276354	0.2690372970092375	6				NaN	NaN	0	NaN	11517	3867	15382
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15387	39.018	NaN	1059	30	0	92.578	0.106			+	27714	MQIKSGKQ	8	48	460.2555998393186	918.4966467454373	2	460.7580261230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MQIKSGKQ_	REV__ENSG00000114248|ENST00000316428|LRRC31;REV__nc|ENSG00000114248|Q6UY01-2|LRRC31;REV__nc|ENSG00000114248|Q6UY01-3|LRRC31;REV__nc|ENSG00000114248|Q6UY01-4|LRRC31	35.61828744233558	0.6843154725607303	6				NaN	NaN	0	NaN	11518	3867	15382
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15388	39.02	NaN	1663.4	30	0	302.89	0.035			+	18804	ITSTDNLIL	9	56	495.2803736466695	988.546194360139	2	495.2799072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ITSTDNLIL_	REV__tr|U7SRW6|U7SRW6_FUSNUDiamineN-acetyltransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01453PE=4SV=1	34.172542307311794	0.4838870758800184	6				NaN	NaN	0	NaN	11519	3867	15382
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15389	39.02	NaN	1211.4	30	0	287.55	0.138			+	39374	STDKGILL	8	37	423.7500617866455	845.485570640091	2	423.7499084472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STDKGILL_	REV__ENSG00000058063|ENST00000323116|ATP11B;REV__ENST00000466758.5_1_3:182602545-182631653:+|nuORF;REV__ENST00000490303.5_1_3:182583321-182631816:+|nuORF	60.29395666154354	0.49887135096048313	6				NaN	NaN	0	NaN	11520	3867	15382
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15407	39.06	NaN	3737.6	30	0	958.38	0.215	+			31055	QEWEVKAL	8	67	501.76694271390096	1001.5193324946019	2	501.7660827636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QEWEVKAL_	ENSG00000227057|ENST00000374617|WDR46	67.49366992349736	0.4277823096851425	6				NaN	NaN	0	NaN	11535	3870	15406
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15408	39.063	NaN	2666.6	30	0	471.9	0.106			+	3074	ASFRIAEV	8	41	446.74808417510184	891.4816154170037	2	446.7479553222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASFRIAEV_	REV__ENSG00000005810|ENST00000544440|MYCBP2;REV__MYCBP2|p.N1867Tfs*9|1|0.15|ENSG00000005810|chr13:77171572-77171572|T/-|frameshift_variant;REV__MYCBP2|p.N3049*|1|0.11|ENSG00000005810|chr13:77097894-77097895|TT/-|frameshift_variant;REV__MYCBP2|p.P4047Qfs*26|2|0.35|ENSG00000005810|chr13:77067782-77067782|G/-|frameshift_variant;REV__MYCBP2|p.T1507Ffs*24|1|0.04|ENSG00000005810|chr13:77185189-77185190|-/TTGTAAA|frameshift_variant;REV__MYCBP2|p.T4311Pfs*37|1|0.14|ENSG00000005810|chr13:77059619-77059619|G/-|frameshift_variant;REV__MYCBP2|p.V3749*|1|0.12|ENSG00000005810|chr13:77081486-77081486|C/-|frameshift_variant;REV__nc|ENSG00000005810|O75592-2|MYCBP2	34.172542307311794	0.6954784234644539	6				NaN	NaN	0	NaN	11536	3870	15406
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15409	39.065	NaN	2305.9	30	0	228.26	0.106	+			630	ADVNLLIAI	9	62	471.2869011914166	940.5592494496332	2	471.3056335449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ADVNLLIAI_	tr|U7SRQ0|U7SRQ0_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01618PE=4SV=1	56.72105179125745	0.24094814563026265	6				NaN	NaN	0	NaN	11537	3870	15406
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15410	39.067	NaN	1994.7	30	0	190.68	0.106	+			37589	SLPDTTATL	9	59	459.74267377584727	NaN	0	459.2677001953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLPDTTATL_	ENSG00000110721|ENST00000265689|CHKA;nc|ENSG00000110721|P35790-2|CHKA	34.172542307311794	0.30503706118289736	6				NaN	NaN	0	NaN	11538	3870	15406
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15411	39.069	NaN	1414.4	30	0	462.24	0.032	+			662	AEAGGLLK	8	41	379.725018407598	NaN	0	379.725341796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEAGGLLK_	ENST00000553925.1_1_14:39534005-39536406:-|nuORF	20.481830146152948	1.741893751539848	6				NaN	NaN	0	NaN	11539	3870	15406
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15429	39.106	NaN	6700.6	30	0	2037	0.214	+			41945	SVVSIVIGK	9	56	451.28963638531513	900.5647198374303	2	451.289794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVVSIVIGK_	nc|ENSG00000136144|Q8NDN9-2|RCBTB1	77.31757898189308	0.1091473830098891	6				NaN	NaN	0	NaN	11554	3873	15428
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15430	39.11	NaN	4534.5	30	0	776.27	0.106	+			17795	IETTGTYQL	9	53	513.2615568610014	1024.5085607888027	2	513.2621459960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IETTGTYQL_	ENSG00000007171|ENST00000313735|NOS2;nc|ENSG00000007171|P35228-2|NOS2;NOS2|p.A650Pfs*53|1|0.21|ENSG00000007171|chr17:27769063-27769063|C/-|frameshift_variant;NOS2|p.Y709*|1|0.33|ENSG00000007171|chr17:27767745-27767745|G/-|frameshift_variant	95.81516180277367	0.04847050768394289	6				NaN	NaN	0	NaN	11555	3873	15428
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15431	39.112	NaN	3079	30	0	346.84	0.106	+			43152	TESSQSFVAV	10	60	527.7561199682116	1053.497687003223	2	527.75732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TESSQSFVAV_	ENSG00000198961|ENST00000361189|PJA2;nc|ENSG00000198961|O43164-2|PJA2;PJA2|p.D450Rfs*6|1|0.16|ENSG00000198961|chr5:109368682-109368683|-/T|frameshift_variant	54.722347961057174	0.4138398245444204	6				NaN	NaN	0	NaN	11556	3873	15428
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15432	39.114	NaN	8592.7	30	0	1441.6	0.036	+			7830	DPVTLNVRY	9	69	538.7927888616499	1075.5710247900997	2	538.7911987304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DPVTLNVRY_	ENSG00000007306|ENST00000401731|CEACAM7	101.25262130126117	0.03792372629710479	6				NaN	NaN	0	NaN	11557	3873	15428
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15450	39.151	NaN	23506	30	0	5752.4	0.214	+			39514	STFNVFVGK	9	75	499.76916825125426	997.5237835693085	2	499.7688293457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STFNVFVGK_	ENSG00000122642|ENST00000242209|FKBP9;ENST00000494374.5_1_7:32997059-33028356:+|nuORF;FKBP9|p.N129Ifs*10|7|0.31|ENSG00000122642|chr7:32975192-32975192|C/-|frameshift_variant;FKBP9|p.P380Lfs*6|1|0.38|ENSG00000122642|chr7:32996258-32996258|C/-|frameshift_variant;nc|ENSG00000122642|O95302-3|FKBP9	159.27591364854348	0.004707062175358555	6				NaN	NaN	0	NaN	11572	3876	15449
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15451	39.155	NaN	6423.9	30	0	1149.9	0.106	+			26343	LSYPQTNVF	9	68	534.7717921207815	1067.5290313083628	2	534.77197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSYPQTNVF_	ENSG00000177105|ENST00000351018|RHOG	60.97194046774394	0.20551255781574032	6				NaN	NaN	0	NaN	11573	3876	15449
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15452	39.157	NaN	7768.4	30	0	634.89	0.106			+	11460	FNFILNTI	8	70	491.2739784211455	980.533403909091	2	491.27325439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FNFILNTI_	REV__ENSG00000014123|ENST00000369278|UFL1;REV__nc|ENSG00000014123|O94874-2|UFL1	47.657333605630114	0.6087971902037268	6				NaN	NaN	0	NaN	11574	3876	15449
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15453	39.159	NaN	4378	30	0	598.8	0.106	+			3970	ATATLQVL	8	53	408.7451951849514	815.4758374367028	2	408.7449951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATATLQVL_	ENSG00000113248|ENST00000231173|PCDHB15;ENSG00000197479|ENST00000354757|PCDHB11;nc|ENSG00000197479|Q9Y5F2-2|PCDHB11	108.08749611321984	0.24621691167378246	6				NaN	NaN	0	NaN	11575	3876	15449
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15454	39.16	NaN	1353.4	30	0	436.02	0.106	+			1717	AGVYSATFL	9	45	464.7442626953125	NaN	0	464.7442626953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AGVYSATFL_	ENSG00000188738|ENST00000424728|FSIP2;FSIP2|p.D5579Mfs*10|1|0.09|ENSG00000188738|chr2:185806029-185806029|A/-|frameshift_variant;FSIP2|p.K6152Rfs*27|1|0.43|ENSG00000188738|chr2:185807758-185807758|A/-|frameshift_variant;FSIP2|p.K6528Nfs*5|1|0.33|ENSG00000188738|chr2:185808884-185808884|A/-|frameshift_variant;FSIP2|p.V5734Yfs*24|2|0.23|ENSG00000188738|chr2:185806499-185806499|A/-|frameshift_variant;FSIP2|p.V6322*|1|0.42|ENSG00000188738|chr2:185808265-185808265|A/-|frameshift_variant	33.51558372728122	0.30835390848773375	6				NaN	NaN	0	NaN	11576	3876	15449
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15455	39.162	NaN	1589.1	30	0	266.67	0.034				-1	HCMRTVGL	8	50	487.24024112578496	972.46592931837	2	487.23956298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_HC(Carbamidomethyl (C))MRTVGL_	ENSG00000240303|ENST00000264990|ACAD11;ENST00000496418.5_1_3:132277817-132297733:-|nuORF;nc|ENSG00000240303|Q709F0-3|ACAD11	26.79610172149135	0.7524337208463756	6				NaN	NaN	0	NaN	11577	3876	15449
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15473	39.2	NaN	4570.5	30	0	545.82	0.214	+			37623	SLQDYIAVK	9	63	518.7849905256895	1035.555428118179	2	518.7874145507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLQDYIAVK_	ENSG00000083845|ENST00000196551|RPS5;ENST00000598807.1_1_19:58899504-58905010:+|nuORF	112.10723106719422	0.02684780151337622	6				NaN	NaN	0	NaN	11592	3879	15472
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15474	39.203	NaN	1754.9	30	0	120.19	0.034			+	38151	SQALFVGLK	9	62	481.7875265574643	961.5605001817286	2	481.7869567871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SQALFVGLK_	REV__nc|ENSG00000205879|Q658T7|FAM90A2P	42.86426827375447	0.38666266728046506	6				NaN	NaN	0	NaN	11593	3879	15472
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15492	39.241	NaN	3880.2	30	0	1309.9	0.214				-1	GTCSKAFIKLK	11	43	418.23973147793214	1251.6973650339964	3	418.23956298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GTC(Carbamidomethyl (C))SKAFIKLK_	ENSG00000118965|ENST00000281405|WDR35;nc|ENSG00000118965|Q9P2L0|WDR35	27.64392233501311	0.6998289966465058	6				NaN	NaN	0	NaN	11608	3882	15491
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15493	39.244	NaN	2156.7	30	0	725.42	0.106			+	33491	RKETHTRCSY	10	53	640.8115097591261	1279.6084665850522	2	640.8123168945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RKETHTRCSY_	REV__ENSG00000147255|ENST00000361420|IGSF1;REV__IGSF1|p.H803Tfs*4|1|0.66|ENSG00000147255|chrX:131277140-131277140|G/-|frameshift_variant;REV__nc|ENSG00000147255|Q8N6C5-2|IGSF1;REV__nc|ENSG00000147255|Q8N6C5-4|IGSF1	35.15202426646627	0.5927656479315102	6				NaN	NaN	0	NaN	11609	3882	15491
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15494	39.246	NaN	1201.3	30	0	154.18	0.033	+			46224	VEALIHAI	8	43	433.2605888416064	864.5066247500129	2	433.2608337402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VEALIHAI_	ENSG00000173801|ENST00000393931|JUP	54.76467175910256	0.5536104764165384	6				NaN	NaN	0	NaN	11610	3882	15491
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15512	39.283	NaN	6171.6	30	0	837.01	0.214				-1	TVILCRMK	8	67	518.7849905256895	1035.555428118179	2	519.2852783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_TVILC(Carbamidomethyl (C))RM(Oxidation (M))K_	ENSG00000066468|ENST00000358487|FGFR2;ENST00000604236.5_1_10:123239373-123278228:-|nuORF;nc|ENSG00000066468|P21802-16|FGFR2;nc|ENSG00000066468|P21802-17|FGFR2;nc|ENSG00000066468|P21802-18|FGFR2;nc|ENSG00000066468|P21802-2|FGFR2;nc|ENSG00000066468|P21802-20|FGFR2;nc|ENSG00000066468|P21802-21|FGFR2;nc|ENSG00000066468|P21802-22|FGFR2;nc|ENSG00000066468|P21802-23|FGFR2;nc|ENSG00000066468|P21802-3|FGFR2;nc|ENSG00000066468|P21802-4|FGFR2;nc|ENSG00000066468|P21802-5|FGFR2;nc|ENSG00000066468|P21802-6|FGFR2;nc|ENSG00000066468|P21802-8|FGFR2	30.503639358989545	0.7238069182250283	6				NaN	NaN	0	NaN	11625	3885	15511
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15513	39.287	NaN	2139.8	30	0	267.53	0.106	+			39262	STANYDFVLK	10	63	579.2957259661196	1156.576898999039	2	579.2962646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STANYDFVLK_	ENSG00000160271|ENST00000372050|RALGDS;ENST00000493438.5_1_9:135973976-135976008:-|nuORF;nc|ENSG00000160271|Q12967-3|RALGDS;nc|ENSG00000160271|Q12967-4|RALGDS;nc|ENSG00000160271|Q12967-5|RALGDS;nc|ENSG00000160271|Q12967-6|RALGDS	91.26522074875469	0.12383023862516404	6				NaN	NaN	0	NaN	11626	3885	15511
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15514	39.289	NaN	3310.3	30	0	637.31	0.106			+	8522	EATWPARR	8	48	493.76154328273327	985.5085336322666	2	493.76141357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EATWPARR_	REV__ENST00000311604.7_1_11:1902696-1904704:+|nuORF	73.97473282117947	0.3737790450121076	6				NaN	NaN	0	NaN	11627	3885	15511
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15515	39.291	NaN	2766.7	30	0	245.39	0.034	+			8758	EEFTVARL	8	59	482.7584471263881	963.5023413195762	2	482.7578430175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EEFTVARL_	ENSG00000155980|ENST00000455537|KIF5A;ENSG00000170759|ENST00000302418|KIF5B;KIF5B|p.M622Wfs*8|1|0.15|ENSG00000170759|chr10:32022898-32022898|T/-|frameshift_variant	60.97194046774394	0.49215940876911696	6				NaN	NaN	0	NaN	11628	3885	15511
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15533	39.327	NaN	454160	30	0	119250	0.131	+			37142	SITSVFITK	9	73	498.29292060091166	994.5712882686233	2	498.2928161621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SITSVFITK_	ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;TRRAP-ASNS|1|fusion;TRRAP-ASNS|2|fusion;TRRAP|p.K3443Sfs*19|1|0.28|ENSG00000196367|chr7:99004246-99004246|A/-|frameshift_variant	168.25843898104137	0.0030641937004078144	6				NaN	NaN	0	NaN	11643	3888	15532
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15534	39.329	NaN	3956.6	30	0	547.95	0.106				-1	KTLVMVATV	9	66	489.2870473849625	976.559541836725	2	489.2869873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_KTLVM(Oxidation (M))VATV_	MYBL1|p.N420Tfs*13|1|0.23|ENSG00000185697|chr8:66576218-66576218|T/-|frameshift_variant	96.19043198914106	0.047412499214244314	6				NaN	NaN	0	NaN	11644	3888	15532
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15535	39.331	NaN	1105.3	30	0	112.12	0.106	+			46296	VEKAGLISL	9	46	465.28668212890625	NaN	0	465.28668212890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VEKAGLISL_	ENSG00000140287|ENST00000267845|HDC;ENST00000558679.1_1_15:50546296-50557931:-|nuORF;ENST00000558761.5_1_15:50545740-50557820:-|nuORF;ENST00000559190.5_1_15:50545740-50555509:-|nuORF;nc|ENSG00000140287|P19113-2|HDC	63.53385203322761	0.134247007536971	6				NaN	NaN	0	NaN	11645	3888	15532
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15536	39.333	NaN	2109.1	30	0	724.06	0.106	+			5729	AVFQIILRR	9	38	372.5732522603105	1114.6979273811314	3	372.5731201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVFQIILRR_	ENSG00000068796|ENST00000407818|KIF2A;KIF2A|p.K643Rfs*4|1|0.2|ENSG00000068796|chr5:62381143-62381143|A/-|frameshift_variant;nc|ENSG00000068796|O00139-1|KIF2A;nc|ENSG00000068796|O00139-2|KIF2A;nc|ENSG00000068796|O00139-5|KIF2A;nc|ENSG00000068796|O00139|KIF2A	27.882242232435846	0.5426732730940306	6				NaN	NaN	0	NaN	11646	3888	15532
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15537	39.334	NaN	2215.3	30	0	409.5	0.106			+	-1	ATCSIVIHS	9	62	515.2546218160952	1028.4946906989903	2	515.2543334960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))ATC(Carbamidomethyl (C))SIVIHS_	REV__ENST00000267890.10_3_15:43034669-43034843:-|nuORF	45.9519527083369	0.35044536499095585	6				NaN	NaN	0	NaN	11647	3888	15532
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15538	39.336	NaN	881.95	30	0	113.19	0.106			+	-1	ELCVTCSI	8	46	462.7114600084204	NaN	0	462.7110595703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_ELCVTC(Carbamidomethyl (C))SI_	REV__ENSG00000130165|ENST00000252445|ELOF1	31.954861631926434	1.7418937515398478	6				NaN	NaN	0	NaN	11648	3888	15532
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15539	39.338	NaN	1158.3	30	0	176.79	0.033	+			5739	AVGAGLLLLG	10	47	442.28406759468663	NaN	0	442.2838134765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AVGAGLLLLG_	ENSG00000005884|ENST00000320031|ITGA3;ENST00000505306.5_1_17:48154319-48165696:+|nuORF;nc|ENSG00000005884|P26006-1|ITGA3	65.89745868150666	0.18611864392217875	6				NaN	NaN	0	NaN	11649	3888	15532
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15557	39.374	NaN	4013.1	30	0	406.56	0.214			+	25024	LLGTDNLTY	9	62	505.2646039957409	1008.5146550582818	2	505.765869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LLGTDNLTY_	REV__ENSG00000196576|ENST00000359337|PLXNB2;REV__ENST00000479701.5_1_22:50714135-50720918:-|nuORF	74.25504064058377	0.12238981753128622	6				NaN	NaN	0	NaN	11664	3891	15556
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15558	39.377	NaN	3520.5	30	0	620.58	0.035				-1	VPSPAQIMY	9	66	511.25516661952815	1020.4957803058563	2	511.25531005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_VPSPAQIM(Oxidation (M))Y_	ENSG00000179051|ENST00000375436|RCC2;RCC2|p.A423Qfs*56|1|0.13|ENSG00000179051|chr1:17413120-17413120|T/-|frameshift_variant	66.42927471994793	0.16001998865088202	6				NaN	NaN	0	NaN	11665	3891	15556
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15576	39.414	NaN	3674.5	30	0	485.46	0.214	+			47461	VPVSVVSDSY	10	60	526.2695588383558	1050.5245647435115	2	526.2696533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VPVSVVSDSY_	ENSG00000105835|ENST00000222553|NAMPT;ENST00000491027.5_1_7:105903822-105925330:-|nuORF	116.90359126533652	0.03170295491068599	6				NaN	NaN	0	NaN	11680	3894	15575
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15577	39.418	NaN	2182.7	30	0	348.49	0.106	+			8062	DVKAVLAVL	9	61	464.29754247003757	926.5805320068752	2	464.29718017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DVKAVLAVL_	DNAH5|p.F4486Lfs*7|2|0.23|ENSG00000039139|chr5:13701317-13701317|A/-|frameshift_variant;DNAH5|p.G1976Efs*78|3|0.44|ENSG00000039139|chr5:13830731-13830731|C/-|frameshift_variant;DNAH5|p.I1855Sfs*16|1|0.33|ENSG00000039139|chr5:13841052-13841052|T/-|frameshift_variant;DNAH5|p.I2945Rfs*76|1|0.07|ENSG00000039139|chr5:13780948-13780949|-/CATTTCTCTT|frameshift_variant;DNAH5|p.I4068*|1|0.07|ENSG00000039139|chr5:13721077-13721077|T/-|frameshift_variant;DNAH5|p.L1467Wfs*3|1|0.23|ENSG00000039139|chr5:13864593-13864593|A/-|frameshift_variant;DNAH5|p.P3316Lfs*22|3|0.33|ENSG00000039139|chr5:13766130-13766130|G/-|frameshift_variant;ENSG00000039139|ENST00000265104|DNAH5	57.81127852772723	0.2318599694398087	6				NaN	NaN	0	NaN	11681	3894	15575
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15578	39.42	NaN	1506.7	30	0	205.86	0.106	+			40872	SVFGTMPLK	9	47	490.2678359596004	978.5211189860008	2	490.26800537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVFGTMPLK_	ENSG00000151348|ENST00000533608|EXT2;nc|ENSG00000151348|Q93063-2|EXT2;nc|ENSG00000151348|Q93063-3|EXT2	39.252832667884924	0.4290233611298554	6				NaN	NaN	0	NaN	11682	3894	15575
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15579	39.422	NaN	2385.6	30	0	515.05	0.106	+			11568	FPMEIRQY	8	58	542.2685694282656	1082.522585923331	2	542.2691650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FPMEIRQY_	ENSG00000115415|ENST00000361099|STAT1;nc|ENSG00000115415|P42224-2|STAT1;STAT1|p.D534Mfs*14|1|0.24|ENSG00000115415|chr2:190980653-190980653|G/-|frameshift_variant;STAT1|p.K567Nfs*25|2|0.2|ENSG00000115415|chr2:190979798-190979798|T/-|frameshift_variant	64.20726635412375	0.4601301477144759	6				NaN	NaN	0	NaN	11683	3894	15575
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15580	39.424	NaN	1436.3	30	0	148.31	0.106	+			11264	FIPSKPSNF	9	56	518.777370842437	1035.540188751674	2	518.777587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FIPSKPSNF_	HERV1_I-int_dup2|chr3:34679996-34686397:+|1.0948245018220069|0.0565463038051543|4.28|448.0|291|2|anti-sense	58.78195531508484	0.22376836668196862	6				NaN	NaN	0	NaN	11684	3894	15575
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15581	39.425	NaN	1641	30	0	142.27	0.036	+			43244	TEVTPVTGASL	11	53	537.7881006004458	1073.5616482676915	2	537.7891235351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TEVTPVTGASL_	ENSG00000160710|ENST00000368474|ADAR;nc|ENSG00000160710|P55265-4|ADAR;nc|ENSG00000160710|P55265-5|ADAR	56.43379154798735	0.3552884390983883	6				NaN	NaN	0	NaN	11685	3894	15575
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15582	39.426	NaN	2021.6	30	0	216.27	0.142	+			31852	QPTVPRQNSAG	11	65	577.7978109480836	1153.581068962967	2	578.2987670898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QPTVPRQNSAG_	DAB2IP|p.N938Tfs*3|1|0.56|ENSG00000136848|chr9:121773334-121773334|C/-|frameshift_variant;ENSG00000136848|ENST00000408936|DAB2IP;nc|ENSG00000136848|Q5VWQ8-2|DAB2IP;nc|ENSG00000136848|Q5VWQ8-3|DAB2IP;nc|ENSG00000136848|Q5VWQ8-4|DAB2IP;nc|ENSG00000136848|Q5VWQ8-5|DAB2IP	53.08895987439943	0.38514566451266113	6				NaN	NaN	0	NaN	11686	3894	15575
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15600	39.466	NaN	2539.6	30	0	430.69	0.214	+			50393	YAAEYANAL	9	58	493.23513079286005	984.4557086525201	2	493.2351989746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YAAEYANAL_	ENSG00000140274|ENST00000323030|DUOXA2	93.19546047674547	0.05585629608842056	6				NaN	NaN	0	NaN	11701	3897	15599
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15601	39.469	NaN	3217.8	30	0	815.47	0.106	+			5837	AVIGPDVFAK	10	54	508.7925070543128	1015.5704611754256	2	508.79278564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVIGPDVFAK_	ENSG00000261150|ENST00000615648|EPPK1;EPPK1|p.G2015Vfs*36|2|0.33|ENSG00000261150|chr8:143867210-143867210|C/-|frameshift_variant;EPPK1|p.Q829Rfs*8|1|0.05|ENSG00000261150|chr8:143870770-143870770|C/-|frameshift_variant;EPPK1|p.Y695Ifs*68|1|0.36|ENSG00000261150|chr8:143871171-143871172|-/T|frameshift_variant	51.19269402634007	0.44601001148513897	6				NaN	NaN	0	NaN	11702	3897	15599
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15602	39.471	NaN	2123.6	30	0	207.63	0.106	+			43080	TELVNVTHL	9	60	513.2852221761175	1024.5558914190349	2	513.2844848632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TELVNVTHL_	CDK12|p.G1271Dfs*23|2|0.26|ENSG00000167258|chr17:39530648-39530648|C/-|frameshift_variant;CDK12|p.P1267Lfs*27|1|0.33|ENSG00000167258|chr17:39530639-39530639|C/-|frameshift_variant;CDK12|p.P526Lfs*84|1|0.16|ENSG00000167258|chr17:39471406-39471406|C/-|frameshift_variant;CDK12|p.P536Hfs*74|1|0.37|ENSG00000167258|chr17:39471435-39471435|C/-|frameshift_variant;CDK12|p.P538Lfs*72|1|0.39|ENSG00000167258|chr17:39471441-39471441|C/-|frameshift_variant;CDK12|p.P683Qfs*70|1|0.34|ENSG00000167258|chr17:39490669-39490669|C/-|frameshift_variant;CDK12|p.Q937Kfs*9|1|0.2|ENSG00000167258|chr17:39515766-39515766|T/-|frameshift_variant;ENSG00000167258|ENST00000447079|CDK12;nc|ENSG00000167258|Q9NYV4-2|CDK12;nc|ENSG00000167258|Q9NYV4-3|CDK12	70.8162118820467	0.13725933411854815	6				NaN	NaN	0	NaN	11703	3897	15599
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15603	39.473	NaN	1502.7	30	0	219.45	0.034	+			25956	LSIIDFKQ	8	50	482.27895307832364	NaN	0	482.2784423828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSIIDFKQ_	ENST00000414602.5_1_17:18759682-18768852:+|nuORF;ENST00000574522.5_1_17:18759682-18768852:+|nuORF	34.172542307311794	1.7418937515398478	6				NaN	NaN	0	NaN	11704	3897	15599
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15621	39.51	NaN	6907.9	30	0	1345.1	0.214	+			36069	SEIYIHGL	8	68	466.2478338290032	930.4811147248064	2	466.2476501464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEIYIHGL_	ENSG00000172336|ENST00000303151|POP7	83.28718786952967	0.2977916691876266	6				NaN	NaN	0	NaN	11719	3900	15620
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15622	39.514	NaN	4824.1	30	0	732.4	0.106			+	17356	IALDAILLN	9	59	478.29495985017996	954.57536676716	2	478.29437255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IALDAILLN_	REV__PROKR1|p.N103D|1|0.45|ENSG00000169618|chr2:68646128-68646128|A/G|missense_variant	82.30502934623384	0.08758161712619916	6				NaN	NaN	0	NaN	11720	3900	15620
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15623	39.516	NaN	2934.6	30	0	315.56	0.036	+			20411	KETLKIDIL	9	68	536.8344687334617	1071.6543845337233	2	536.8346557617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KETLKIDIL_	ENSG00000163565|ENST00000295809|IFI16;ENST00000493884.5_1_1:158984458-159022017:+|nuORF;nc|ENSG00000163565|Q16666-2|IFI16;nc|ENSG00000163565|Q16666-3|IFI16;nc|ENSG00000163565|Q16666-6|IFI16;nc|ENSG00000163565|Q16666-8|IFI16	46.45678178249821	0.34452392205506005	6				NaN	NaN	0	NaN	11721	3900	15620
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15641	39.554	NaN	7062.9	30	0	2050.4	0.214	+			39150	SSVPGVRLL	9	52	464.28487743159815	926.5552019299963	2	464.28436279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSVPGVRLL_	ENSG00000026025|ENST00000544301|VIM;ENST00000485947.1_1_10:17271421-17272784:+|nuORF;VIM|p.R71W|1|0.4|ENSG00000026025|chr10:17229633-17229633|C/T|missense_variant	84.9155231211612	0.07920012719736333	6				NaN	NaN	0	NaN	11736	3903	15640
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15642	39.557	NaN	826.88	30	0	85.424	0.106			+	36399	SETKNVYV	8	49	470.2424011230469	NaN	0	470.2424011230469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SETKNVYV_	REV__PROM1|p.N415K|1|0.36|ENSG00000007062|chr4:16009005-16009005|G/T|missense_variant	29.14955571784316	1.7418937515398478	6				NaN	NaN	0	NaN	11737	3903	15640
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15643	39.559	NaN	1029.9	30	0	92.058	0.106	+			29658	PGLQLSDL	8	43	421.734619140625	NaN	0	421.734619140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PGLQLSDL_	ENSG00000165509|ENST00000298296|MAGEC3;MAGEC3|p.E168Rfs*45|1|0.33|ENSG00000165509|chrX:141879413-141879413|G/-|frameshift_variant;REV__ENSG00000089597|ENST00000356638|GANAB;REV__ENST00000524437.5_1_11:62402291-62406896:-|nuORF;REV__nc|ENSG00000089597|Q14697-2|GANAB	27.882242232435846	1.7418937515398478	6				NaN	NaN	0	NaN	11738	3903	15640
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15644	39.561	NaN	1154.8	30	0	194.7	0.106	+			43987	TPGIQTASL	9	51	444.2449035644531	NaN	0	444.2449035644531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TPGIQTASL_	ENSG00000152254|ENST00000375363|G6PC2	44.377184641726394	0.24544280798894275	6				NaN	NaN	0	NaN	11739	3903	15640
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15645	39.563	NaN	931.86	30	0	108.05	0.106	+			50636	YECQLIYK	8	51	530.2614170053811	NaN	0	530.2606811523438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YECQLIYK_	DSP|p.D1987Y|1|0.32|ENSG00000096696|chr6:7583221-7583221|G/T|missense_variant	45.9519527083369	1.7418937515398478	6				NaN	NaN	0	NaN	11740	3903	15640
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15646	39.565	NaN	534.98	30	0	43.933	0.034				-1	MAKCAWKG	8	41	484.2284851074219	NaN	0	484.2284851074219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))AKC(Carbamidomethyl (C))AWKG_	ENSG00000182013|ENST00000313683|PNMA8A;nc|ENSG00000182013|Q86V59-2|PNMA8A	20.481830146152948	1.741893751539848	6				NaN	NaN	0	NaN	11741	3903	15640
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15681	39.64	NaN	1775.3	30	0	482.95	0.214	+			45515	TYGSGFHF	8	45	458.20385692280695	914.3931609124139	2	458.20379638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TYGSGFHF_	nc|ENSG00000284753|P0DPD7|EEF1AKMT4	28.2542754592877	0.7411748056684583	6				NaN	NaN	0	NaN	11770	3909	15680
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15682	39.644	NaN	1008.7	30	0	102.14	0.106	+			1	AAAAAEPPFY	10	57	504.2459411621094	NaN	0	504.2459411621094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAAAAEPPFY_	ENSG00000133124|ENST00000372129|IRS4;IRS4|p.K843Ffs*9|1|0.05|ENSG00000133124|chrX:108733818-108733819|-/TATTACAAAA|frameshift_variant;IRS4|p.K843Pfs*106|1|0.02|ENSG00000133124|chrX:108733819-108733820|-/GA|frameshift_variant;IRS4|p.S1063Afs*9|1|0.36|ENSG00000133124|chrX:108733159-108733159|G/-|frameshift_variant;nc|ENSG00000133124|O14654|IRS4	37.15910966729921	0.3781637092648983	6				NaN	NaN	0	NaN	11771	3909	15680
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15683	39.646	NaN	2517.9	30	0	453.39	0.034			+	13766	GQGASVTDLL	10	53	480.75358384899226	959.4926147647845	2	480.75482177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GQGASVTDLL_	REV__ENST00000470779.1_1_1:155028301-155028614:+|nuORF	51.19269402634007	0.44601001148513897	6				NaN	NaN	0	NaN	11772	3909	15680
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15701	39.683	NaN	5868.9	30	0	764.35	0.214	+			37143	SITSVFITK	9	74	498.29292060091166	994.5712882686233	2	498.2928771972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SITSVFITK_	ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;TRRAP-ASNS|1|fusion;TRRAP-ASNS|2|fusion;TRRAP|p.K3443Sfs*19|1|0.28|ENSG00000196367|chr7:99004246-99004246|A/-|frameshift_variant	53.08895987439943	0.27122541748218487	6				NaN	NaN	0	NaN	11787	3912	15700
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15702	39.686	NaN	5237.3	30	0	660.4	0.106	+			45150	TVLQYVVGR	9	66	517.8031070709678	1033.5916612087356	2	517.8038330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVLQYVVGR_	ENSG00000155561|ENST00000285968|NUP205;NUP205|p.S1260N|1|0.36|ENSG00000155561|chr7:135618419-135618419|G/A|missense_variant	138.06239232086	0.011389075116295402	6				NaN	NaN	0	NaN	11788	3912	15700
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15703	39.688	NaN	1839.3	30	0	537.81	0.106	+			44064	TPSPPEVVY	9	47	494.7532359434009	987.4919189536018	2	494.75384521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TPSPPEVVY_	ENSG00000156127|ENST00000286639|BATF;ENST00000555795.1_1_14:75988823-76013011:+|nuORF	31.954861631926434	0.5046124803899898	6				NaN	NaN	0	NaN	11789	3912	15700
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15704	39.69	NaN	2770.7	30	0	483.82	0.036			+	13304	GKEMPIAVLY	10	61	560.8063780089273	1119.5982030846544	2	560.8069458007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GKEMPIAVLY_	REV__ENSG00000225190|ENST00000430334|PLEKHM1;REV__ENST00000582035.1_1_17:43530658-43531768:-|nuORF;REV__ENST00000582201.5_1_17:62781409-62811241:-|nuORF	65.15724298150197	0.31893571707528906	6				NaN	NaN	0	NaN	11790	3912	15700
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15722	39.728	NaN	18857	30	0	9755.7	0.214	+			29113	NTQDVLIFK	9	74	539.3007630777869	1076.5869732223737	2	539.3007202148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NTQDVLIFK_	ENSG00000156958|ENST00000560031|GALK2;nc|ENSG00000156958|Q01415-2|GALK2	168.25843898104137	0.0030641937004078144	6				NaN	NaN	0	NaN	11805	3915	15721
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15723	39.731	NaN	3637.6	30	0	502.39	0.106	+			44255	TSAFMPVLK	9	71	497.2755964610472	992.5366399888944	2	497.2751159667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TSAFMPVLK_	ENSG00000138674|ENST00000395310|SEC31A;ENST00000505479.1_1_4:83740229-83742267:-|nuORF;nc|ENSG00000138674|O94979-10|SEC31A;nc|ENSG00000138674|O94979-2|SEC31A;nc|ENSG00000138674|O94979-3|SEC31A;nc|ENSG00000138674|O94979-4|SEC31A;nc|ENSG00000138674|O94979-6|SEC31A;nc|ENSG00000138674|O94979-7|SEC31A;nc|ENSG00000138674|O94979-8|SEC31A;nc|ENSG00000138674|O94979-9|SEC31A	104.74654710444128	0.034358562718640136	6				NaN	NaN	0	NaN	11806	3915	15721
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15724	39.733	NaN	14304	30	0	7102.7	0.106	+			26708	LVIPFTIKK	9	56	353.5705309536038	1057.6897634610114	3	353.5703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LVIPFTIKK_	ENSG00000196924|ENST00000369850|FLNA;ENST00000490936.5_1_X:153579531-153588003:-|nuORF;FLNA|p.G2237Efs*109|1|0.28|ENSG00000196924|chrX:154352240-154352240|C/-|frameshift_variant;FLNA|p.R2520Vfs*16|1|0.7|ENSG00000196924|chrX:154349560-154349560|G/-|frameshift_variant;nc|ENSG00000196924|P21333-2|FLNA	69.6276240434122	0.14239879520340665	6				NaN	NaN	0	NaN	11807	3915	15721
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15725	39.735	NaN	1393.2	30	0	221.27	0.106	+			18279	IPKDGSLASY	10	60	525.7777398967895	NaN	0	525.7776489257812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IPKDGSLASY_	DNAH2|p.K4326Rfs*84|3|0.27|ENSG00000183914|chr17:7832920-7832920|C/-|frameshift_variant;DNAH2|p.Q4263Sfs*13|1|0.12|ENSG00000183914|chr17:7832639-7832639|C/-|frameshift_variant;ENSG00000183914|ENST00000572933|DNAH2;nc|ENSG00000183914|Q9P225-2|DNAH2	51.52775601994872	0.29594378441454594	6				NaN	NaN	0	NaN	11808	3915	15721
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15726	39.737	NaN	1454.3	30	0	325.15	0.106	+			49073	VVKLFSEK	8	53	475.2892829360207	948.5640129388414	2	475.28924560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVKLFSEK_	ENSG00000161533|ENST00000293217|ACOX1;nc|ENSG00000161533|Q15067-3|ACOX1;nc|ENSG00000161533|Q15067|ACOX1	35.61828744233558	0.6843154725607303	6				NaN	NaN	0	NaN	11809	3915	15721
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15727	39.739	NaN	1304.2	30	0	223.98	0.036			+	24891	LKLDQFQTL	9	59	553.3178467705045	NaN	0	553.317626953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LKLDQFQTL_	REV__nc|ENSG00000214954|Q6ZNQ3-2|LRRC69	50.033510581677724	0.206462018841031	6				NaN	NaN	0	NaN	11810	3915	15721
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15728	39.739	NaN	1090	30	0	149.56	0.14			+	3607	ASVSLLFGAL	10	54	489.28729248046875	NaN	0	489.28729248046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASVSLLFGAL_	REV__ENSG00000137103|ENST00000643932|TMEM8B;REV__nc|ENSG00000137103|A6NDV4-2|TMEM8B;REV__nc|ENSG00000137103|A6NDV4-3|TMEM8B;REV__nc|ENSG00000137103|A6NDV4|TMEM8B	27.882242232435846	0.4086243523356342	6				NaN	NaN	0	NaN	11811	3915	15721
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15746	39.779	NaN	11848	30	0	1641.3	0.214	+			42729	TDGKVFQF	8	71	471.2400271248692	940.4655013165384	2	471.2395935058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TDGKVFQF_	ENSG00000114391|ENST00000394077|RPL24	157.32903759742106	0.1177781622133242	6				NaN	NaN	0	NaN	11826	3918	15745
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15747	39.782	NaN	1885.8	30	0	286.72	0.106	+			11569	FPMEIRQY	8	62	542.2685694282656	1082.522585923331	2	542.2685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FPMEIRQY_	ENSG00000115415|ENST00000361099|STAT1;nc|ENSG00000115415|P42224-2|STAT1;STAT1|p.D534Mfs*14|1|0.24|ENSG00000115415|chr2:190980653-190980653|G/-|frameshift_variant;STAT1|p.K567Nfs*25|2|0.2|ENSG00000115415|chr2:190979798-190979798|T/-|frameshift_variant	84.9155231211612	0.2928622555056503	6				NaN	NaN	0	NaN	11827	3918	15745
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15748	39.784	NaN	1831.8	30	0	93.546	0.106	+			38025	SPNEFKVYM	9	65	557.7654337620086	1113.516314590817	2	557.7661743164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SPNEFKVYM_	ENSG00000133313|ENST00000324262|CNDP2;ENST00000577409.1_1_18:72183591-72185955:+|nuORF;nc|ENSG00000133313|Q96KP4-2|CNDP2	69.6276240434122	0.14239879520340665	6				NaN	NaN	0	NaN	11828	3918	15745
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15749	39.786	NaN	2374.8	30	0	279.22	0.035	+			11895	FTSPPSLFK	9	60	512.2791466796755	1022.543740426151	2	512.2789306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FTSPPSLFK_	ENSG00000145216|ENST00000337488|FIP1L1;ENST00000505125.5_1_4:54245288-54325613:+|nuORF;ENST00000513975.5_1_4:54244032-54306933:+|nuORF;FIP1L1|p.D472Efs*3|1|0.45|ENSG00000145216|chr4:53453049-53453050|-/G|frameshift_variant;FIP1L1|p.R473Lfs*2|1|0.5|ENSG00000145216|chr4:53453051-53453052|-/T|frameshift_variant;nc|ENSG00000145216|Q6UN15-3|FIP1L1;nc|ENSG00000145216|Q6UN15-4|FIP1L1;nc|ENSG00000145216|Q6UN15-5|FIP1L1	47.657333605630114	0.33044192980041115	6				NaN	NaN	0	NaN	11829	3918	15745
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15767	39.824	NaN	2983.2	30	0	372.07	0.142	+			2883	ASASLFPLK	9	66	467.2755741734546	932.5365954137092	2	467.7766418457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASASLFPLK_	ENSG00000102804|ENST00000458659|TSC22D1;ENST00000460842.5_1_13:45113009-45147408:-|nuORF;nc|ENSG00000102804|Q15714-3|TSC22D1	79.71258880314673	0.09879134589249085	6				NaN	NaN	0	NaN	11844	3921	15766
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15785	39.862	NaN	5043.1	30	0	964.97	0.214	+			17710	IEMNINKM	8	63	496.74728702182324	991.4800211104465	2	496.7474060058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IEMNINKM_	ENSG00000173612|ENST00000310357|GPRC6A;GPRC6A|p.L564Vfs*14|1|0.08|ENSG00000173612|chr6:116793233-116793234|-/TATTTAC|frameshift_variant;GPRC6A|p.V453Lfs*6|1|0.08|ENSG00000173612|chr6:116800775-116800776|-/TAAG|frameshift_variant;nc|ENSG00000173612|Q5T6X5-3|GPRC6A	66.42927471994793	0.4381325844043345	6				NaN	NaN	0	NaN	11859	3924	15784
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15786	39.865	NaN	3596.8	30	0	440.28	0.106	+			4579	ATLEVSSIIK	10	60	530.8163412188333	1059.6181295044664	2	530.816650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATLEVSSIIK_	ARFGAP3|p.G224Afs*32|1|0.31|ENSG00000242247|chr22:42823659-42823659|T/-|frameshift_variant;ENSG00000242247|ENST00000263245|ARFGAP3;nc|ENSG00000242247|Q9NP61-2|ARFGAP3	66.96192283764107	0.30252237217063654	6				NaN	NaN	0	NaN	11860	3924	15784
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15787	39.867	NaN	1840.3	30	0	276.17	0.106			+	11096	FFFGVWCF	8	57	526.7384974287359	1051.4624419242716	2	526.739013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FFFGVWCF_	REV__ENST00000248071.5_1_19:16438179-16438317:+|nuORF	33.49298260027079	0.7007254697536482	6				NaN	NaN	0	NaN	11861	3924	15784
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15788	39.869	NaN	2198.4	30	0	377.05	0.106	+			29148	NVATTLPSY	9	57	483.25052988958464	964.4865068459693	2	483.25	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NVATTLPSY_	ENSG00000131507|ENST00000253814|NDFIP1	69.6276240434122	0.14239879520340665	6				NaN	NaN	0	NaN	11862	3924	15784
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15789	39.871	NaN	2385.9	30	0	345.2	0.106	+			28982	NSKVYVGDY	9	60	522.7535622765088	1043.4925716198175	2	522.7537231445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NSKVYVGDY_	tr|U7T3J3|U7T3J3_FUSNUAutotransporterdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00684PE=4SV=1	34.172542307311794	0.4838870758800184	6				NaN	NaN	0	NaN	11863	3924	15784
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15790	39.873	NaN	1446	30	0	188.75	0.033	+			17499	IDFPARAI	8	51	451.7577660038799	901.5009790745598	2	451.7575988769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IDFPARAI_	ENSG00000115392|ENST00000233741|FANCL;nc|ENSG00000115392|Q9NW38-2|FANCL	44.116797842482775	0.6307669463330267	6				NaN	NaN	0	NaN	11864	3924	15784
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15808	39.91	NaN	27845	30	0	8315.9	0.214			+	7256	DALSTFLVK	9	73	497.2846477274755	992.554742521751	2	497.28411865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DALSTFLVK_	REV__ENSG00000131018|ENST00000367255|SYNE1;REV__ENST00000367256.9_1_6:152443573-152639413:-|nuORF;REV__nc|ENSG00000131018|Q8NF91-2|SYNE1;REV__nc|ENSG00000131018|Q8NF91-4|SYNE1;REV__nc|ENSG00000131018|Q8NF91-8|SYNE1;REV__SYNE1|p.G6773Wfs*7|1|0.44|ENSG00000131018|chr6:152236186-152236187|-/A|frameshift_variant;REV__SYNE1|p.K6871Rfs*22|2|0.52|ENSG00000131018|chr6:152233881-152233881|T/-|frameshift_variant;REV__SYNE1|p.L8283Pfs*8|1|0.19|ENSG00000131018|chr6:152148173-152148174|-/G|frameshift_variant;REV__SYNE1|p.V8635Sfs*12|1|0.15|ENSG00000131018|chr6:152133375-152133375|T/-|frameshift_variant	58.78195531508484	0.22376836668196862	6				NaN	NaN	0	NaN	11879	3927	15807
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15809	39.913	NaN	13543	30	0	2198.1	0.106	+			16054	HAVVNLINY	9	73	521.7878898071247	1041.5612266810492	2	521.7879638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HAVVNLINY_	CTNNB1|p.L301Hfs*16|1|0.05|ENSG00000168036|chr3:41225827-41225831|TTCAA/-|frameshift_variant;CTNNB1|p.M271Wfs*5|1|0.08|ENSG00000168036|chr3:41225733-41225733|A/-|frameshift_variant;ENSG00000168036|ENST00000349496|CTNNB1	73.97473282117947	0.12360187025703594	6				NaN	NaN	0	NaN	11880	3927	15807
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15810	39.915	NaN	2947	30	0	417.94	0.036	+			16741	HLPGHSAQKP	10	65	536.289286168066	NaN	0	536.2896728515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HLPGHSAQKP_	nc|ENSG00000088827|Q9BZZ2-2|SIGLEC1	35.61828744233558	0.3832230071539346	6				NaN	NaN	0	NaN	11881	3927	15807
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15828	39.953	NaN	7657.1	30	0	873.96	0.214	+			35540	SAVLFTITK	9	64	490.294870269746	978.575187606292	2	490.29443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAVLFTITK_	ENSG00000177189|ENST00000379565|RPS6KA3;RPS6KA3|p.N713Rfs*13|1|0.08|ENSG00000177189|chrX:20155483-20155484|-/AGCACAAGTTC|frameshift_variant	104.01359247289065	0.03510646158778409	6				NaN	NaN	0	NaN	11896	3930	15827
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15829	39.956	NaN	6331.7	30	0	3683	0.106			+	37374	SLFSAFAALRQ	11	41	404.2242909811578	1209.6510435436735	3	404.5584411621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLFSAFAALRQ_	REV__nc|ENSG00000175701|Q8NCU8-1|MTLN	25.57405402267927	0.7215402271931856	6				NaN	NaN	0	NaN	11897	3930	15827
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15830	39.958	NaN	779.85	30	0	101.41	0.106				-1	 	0	30	350.7044643470267	699.3943757608534	2	350.70465087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11898	3930	15827
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15831	39.96	NaN	1443.1	30	0	142.34	0.035			+	7400	DEFRILPF	8	51	518.7768129337622	NaN	0	518.7781982421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DEFRILPF_	REV__ENSG00000048707|ENST00000620676|VPS13D;REV__nc|ENSG00000048707|Q5THJ4-2|VPS13D	35.200714571348534	1.7418937515398478	6				NaN	NaN	0	NaN	11899	3930	15827
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15849	39.998	NaN	1777.9	30	0	343.75	0.214	+			21995	KSFFDVALK	9	56	527.8002153273695	1053.585877721539	2	527.8004150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSFFDVALK_	AHR|p.D549Vfs*28|1|0.18|ENSG00000106546|chr7:17339471-17339474|ATTT/-|frameshift_variant;AHR|p.F562Sfs*16|1|0.24|ENSG00000106546|chr7:17339506-17339506|T/-|frameshift_variant;ENSG00000106546|ENST00000242057|AHR	34.08650109265054	0.48469117675810086	6				NaN	NaN	0	NaN	11914	3933	15848
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15850	40.001	NaN	1192.7	30	0	168.54	0.106	+			36998	SIPGGYNAL	9	46	446.2322305039087	890.4499080746174	2	446.2318115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SIPGGYNAL_	ENSG00000135018|ENST00000376395|UBQLN1;ENSG00000160803|ENST00000368309|UBQLN4;ENSG00000188021|ENST00000338222|UBQLN2;ENST00000533705.5_1_9:86284090-86294929:-|nuORF;nc|ENSG00000135018|Q9UMX0-2|UBQLN1;nc|ENSG00000135018|Q9UMX0-3|UBQLN1;UBQLN2|p.N281Sfs*92|1|0.34|ENSG00000188021|chrX:56564713-56564725|GAATGCCGCACAA/-|frameshift_variant;UBQLN2|p.P525Lfs*71|10|0.37|ENSG00000188021|chrX:56565441-56565441|C/-|frameshift_variant;UBQLN4|p.A385Pfs*7|1|0.03|ENSG00000160803|chr1:156042886-156042887|GC/-|frameshift_variant;UBQLN4|p.R283H|1|0.14|ENSG00000160803|chr1:156048553-156048553|C/T|missense_variant	44.116797842482775	0.37197099687881774	6				NaN	NaN	0	NaN	11915	3933	15848
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15851	40.003	NaN	1210.2	30	0	80.166	0.106	+			42184	SYYNQPVFLA	10	50	601.2980652654048	1200.5815775976096	2	601.7994384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SYYNQPVFLA_	ENSG00000138449|ENST00000261024|SLC40A1;SLC40A1|p.L398Wfs*55|1|0.2|ENSG00000138449|chr2:189563794-189563794|G/-|frameshift_variant	34.172542307311794	0.6007644933930345	6				NaN	NaN	0	NaN	11916	3933	15848
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15852	40.005	NaN	1335.8	30	0	145.94	0.106	+			10029	ERVPSSRND	9	59	530.2616300328992	NaN	0	530.2621459960938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ERVPSSRND_	ENST00000471877.5_1_7:149576281-149576879:+|nuORF	29.170058357718403	0.3302935627494407	6				NaN	NaN	0	NaN	11917	3933	15848
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15853	40.007	NaN	2368.5	30	0	146.23	0.044	+			27403	MKRNRWLQMWR	11	69	535.6171264648438	NaN	0	535.6171264648438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MKRNRWLQMWR_	ENST00000496445.5_1_10:114207222-114224375:+|nuORF	10.10389549528425	0.456735970842152	6				NaN	NaN	0	NaN	11918	3933	15848
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15871	40.044	NaN	15121	30	0	1925.2	0.214	+			28853	NPVELKALY	9	73	523.7978080433438	1045.5810631534875	2	523.7979125976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NPVELKALY_	DST|p.K5076Nfs*24|1|0.31|ENSG00000151914|chr6:56472218-56472218|T/-|frameshift_variant;DST|p.L1539Ffs*11|1|0.39|ENSG00000151914|chr6:56611525-56611526|-/A|frameshift_variant;DST|p.N1220Tfs*9|1|0.23|ENSG00000151914|chr6:56630354-56630354|T/-|frameshift_variant;DST|p.T4428Nfs*23|1|0.12|ENSG00000151914|chr6:56497896-56497897|-/T|frameshift_variant;ENSG00000127603|ENST00000564288|MACF1;ENSG00000151914|ENST00000680361|DST;ENST00000521104.1_1_6:56504020-56557947:-|nuORF;ENST00000523967.5_1_6:56504020-56716372:-|nuORF;MACF1|p.A5223Lfs*8|1|0.21|ENSG00000127603|chr1:39388486-39388486|G/-|frameshift_variant;MACF1|p.N4824Kfs*19|1|0.33|ENSG00000127603|chr1:39387292-39387293|-/A|frameshift_variant;MACF1|p.P924Hfs*52|1|0.23|ENSG00000127603|chr1:39303040-39303040|C/-|frameshift_variant;MACF1|p.S2157Ffs*3|1|0.37|ENSG00000127603|chr1:39333036-39333037|-/T|frameshift_variant;MACF1|p.T4896Lfs*29|1|0.27|ENSG00000127603|chr1:39387507-39387507|A/-|frameshift_variant;nc|ENSG00000127603|Q9UPN3-2|MACF1;nc|ENSG00000127603|Q9UPN3-3|MACF1;nc|ENSG00000127603|Q9UPN3-4|MACF1;nc|ENSG00000127603|Q9UPN3|MACF1;nc|ENSG00000151914|Q03001-13|DST;nc|ENSG00000151914|Q03001-14|DST;nc|ENSG00000151914|Q03001|DST	163.1509380574825	0.003936019289634439	6				NaN	NaN	0	NaN	11933	3936	15870
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15872	40.047	NaN	2756.6	30	0	413.71	0.106			+	-1	MEPSEVTVL	9	67	510.7499561023688	1019.4853592715376	2	510.7498474121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_M(Oxidation (M))EPSEVTVL_	REV__ENSG00000157423|ENST00000393567|HYDIN;REV__HYDIN|p.E2653Kfs*4|1|0.27|ENSG00000157423|chr16:70918259-70918259|T/-|frameshift_variant;REV__HYDIN|p.F4256Vfs*111|1|0.27|ENSG00000157423|chr16:70849833-70849834|-/C|frameshift_variant;REV__HYDIN|p.I1986Nfs*6|1|0.45|ENSG00000157423|chr16:70961970-70961971|-/T|frameshift_variant;REV__HYDIN|p.R1703Lfs*51|1|0.5|ENSG00000157423|chr16:70973950-70973951|-/GA|frameshift_variant;REV__HYDIN|p.V3416Gfs*64|1|0.15|ENSG00000157423|chr16:70879725-70879726|-/ACTCC|frameshift_variant	37.15910966729921	0.4535818937225704	6				NaN	NaN	0	NaN	11934	3936	15870
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15873	40.049	NaN	1648.4	30	0	244.22	0.106				-1	ALEAQKMM	8	59	469.2277064730199	NaN	0	469.2273864746094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_ALEAQKM(Oxidation (M))M_	ENSG00000152582|ENST00000356031|SPEF2;nc|ENSG00000152582|Q9C093-2|SPEF2;nc|ENSG00000152582|Q9C093-3|SPEF2;SPEF2|p.I1348Nfs*12|1|0.34|ENSG00000152582|chr5:35773981-35773982|-/A|frameshift_variant;SPEF2|p.N1040Tfs*10|1|0.32|ENSG00000152582|chr5:35739972-35739972|A/-|frameshift_variant;SPEF2|p.T1227Qfs*5|1|0.23|ENSG00000152582|chr5:35763576-35763576|A/-|frameshift_variant	63.30626980617807	1.7418937515398478	6				NaN	NaN	0	NaN	11935	3936	15870
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15874	40.051	NaN	1279.1	30	0	146.66	0.106	+			41897	SVTVRNGGSP	10	50	487.2585613422311	NaN	0	487.25799560546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVTVRNGGSP_	CUBN|p.F3041Lfs*38|1|0.06|ENSG00000107611|chr10:16874487-16874488|-/GCTTTCTT|frameshift_variant;CUBN|p.L2960Ffs*41|1|0.39|ENSG00000107611|chr10:16888438-16888442|AAGTC/-|frameshift_variant;CUBN|p.V3542Cfs*18|1|0.17|ENSG00000107611|chr10:16828945-16828946|-/A|frameshift_variant;ENSG00000107611|ENST00000377833|CUBN	37.81151784470057	0.3760215235790741	6				NaN	NaN	0	NaN	11936	3936	15870
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15875	40.053	NaN	880.72	30	0	70.21	0.034	+			42274	TACQVATAF	9	50	456.21774308715715	910.4209332411143	2	456.21820068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TACQVATAF_	ENSG00000169093|ENST00000381317|ASMTL;nc|ENSG00000292339|O95671-2|ASMTL;nc|ENSG00000292339|O95671-3|ASMTL	24.519189625965996	0.574102787014149	6				NaN	NaN	0	NaN	11937	3936	15870
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15893	40.09	NaN	2652.3	30	0	395.63	0.214	+			6538	AYGFVARI	8	55	448.75324969183026	895.4919464504605	2	448.7530517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AYGFVARI_	ENSG00000110799|ENST00000261405|VWF;ENST00000321023.5_1_12:6204574-6232125:-|nuORF;nc|ENSG00000110799|P04275-2|VWF;VWF|p.D1472Tfs*53|1|0.21|ENSG00000110799|chr12:6019004-6019004|C/-|frameshift_variant	105.26878712358291	0.24777199087279123	6				NaN	NaN	0	NaN	11952	3939	15892
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15894	40.094	NaN	1920.5	30	0	374.4	0.035	+			11967	FVLWAPAIL	9	58	515.3101742485056	1028.6057955638112	2	515.3103637695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FVLWAPAIL_	ENSG00000133019|ENST00000676153|CHRM3;ENSG00000168539|ENST00000306960|CHRM1;ENSG00000180720|ENST00000682254|CHRM4;nc|ENSG00000168539|P11229-2|CHRM1	65.80317337860623	0.1652391959156183	6				NaN	NaN	0	NaN	11953	3939	15892
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15912	40.131	NaN	6772.7	30	0	1143.5	0.214	+			11765	FSKIGGIL	8	67	417.75808217698784	833.5016114207757	2	417.7580261230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FSKIGGIL_	ENSG00000140575|ENST00000268182|IQGAP1;ENSG00000145703|ENST00000274364|IQGAP2;ENSG00000183856|ENST00000361170|IQGAP3;IQGAP1|p.N941Ifs*8|1|0.43|ENSG00000140575|chr15:90476693-90476693|A/-|frameshift_variant;IQGAP1|p.S1529Afs*10|1|0.15|ENSG00000140575|chr15:90492665-90492665|A/-|frameshift_variant;IQGAP2|p.K608Nfs*42|1|0.36|ENSG00000145703|chr5:76637072-76637072|A/-|frameshift_variant;IQGAP2|p.Q1499Rfs*15|1|0.05|ENSG00000145703|chr5:76701201-76701202|-/CCGAG|frameshift_variant;IQGAP2|p.T881Hfs*2|2|0.3|ENSG00000145703|chr5:76665133-76665133|A/-|frameshift_variant;IQGAP3|p.Q1205Sfs*31|1|0.4|ENSG00000183856|chr1:156534628-156534628|G/-|frameshift_variant;REV__ENSG00000134452|ENST00000362091|FBH1;REV__ENST00000475867.5_1_10:5963439-5965826:+|nuORF;REV__nc|ENSG00000134452|Q8NFZ0-2|FBH1	111.64827973302667	0.24425243057279236	6				NaN	NaN	0	NaN	11968	3942	15911
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15913	40.135	NaN	2318.2	30	0	462.05	0.106	+			10787	FAHEAPAFLP	10	53	550.2805999498684	1098.5466469665366	2	550.2818603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FAHEAPAFLP_	ENSG00000077498|ENST00000263321|TYR;ENST00000526139.1_1_11:88911121-88933495:+|nuORF;nc|ENSG00000077498|P14679-2|TYR	35.61828744233558	0.588957954432594	6				NaN	NaN	0	NaN	11969	3942	15911
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15914	40.137	NaN	2978.1	30	0	658.66	0.035	+			26941	LYGKIAEAF	9	59	506.2794881963059	1010.5444234594119	2	506.2792053222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LYGKIAEAF_	ENSG00000123159|ENST00000393033|GIPC1;ENST00000587811.1_1_19:14593203-14593794:-|nuORF;GIPC1|p.G115Afs*13|1|0.3|ENSG00000123159|chr19:14480723-14480723|C/-|frameshift_variant;GIPC1|p.R91H|1|0.19|ENSG00000123159|chr19:14482705-14482705|C/T|missense_variant	96.19043198914106	0.047412499214244314	6				NaN	NaN	0	NaN	11970	3942	15911
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15932	40.174	NaN	1791.1	30	0	456.65	0.214			+	-1	SGPLAAECVY	10	56	533.7484486437046	NaN	0	533.7490844726562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SGPLAAEC(Carbamidomethyl (C))VY_	REV__ENSG00000146555|ENST00000404826|SDK1;REV__ENST00000478527.1_1_7:3990577-3991593:+|nuORF;REV__nc|ENSG00000146555|Q7Z5N4-3|SDK1;REV__SDK1|p.Q1487Pfs*37|1|0.27|ENSG00000146555|chr7:4149293-4149294|-/C|frameshift_variant;REV__SDK1|p.V1762Wfs*2|1|0.28|ENSG00000146555|chr7:4208168-4208168|G/-|frameshift_variant	35.61828744233558	0.3832230071539346	6				NaN	NaN	0	NaN	11985	3945	15931
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15933	40.178	NaN	1668	30	0	187.02	0.033			+	10899	FDAPPPSL	8	44	422.2158867234246	NaN	0	422.2163391113281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FDAPPPSL_	REV__ENST00000355852.6_1_3:51991634-51991799:-|nuORF	60.29395666154354	1.7418937515398478	6				NaN	NaN	0	NaN	11986	3945	15931
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15951	40.215	NaN	6541.2	30	0	2272.4	0.214	+			18880	IVGTVLIIK	9	56	478.3313240179165	954.648095102633	2	478.33062744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IVGTVLIIK_	ENSG00000231389|ENST00000419277|HLA-DPA1	139.97047562133406	0.010493916756945389	6				NaN	NaN	0	NaN	12001	3948	15950
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15952	40.218	NaN	1176.5	30	0	201.28	0.034	+			28682	NLYIISVK	8	52	475.28905713702983	NaN	0	475.288818359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NLYIISVK_	ENSG00000125691|ENST00000479035|RPL23;ENST00000577760.1_1_17:37008851-37009031:-|nuORF;ENST00000584912.5_1_17:37008851-37009963:-|nuORF	32.81241826257853	1.7418937515398478	6				NaN	NaN	0	NaN	12002	3948	15950
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15970	40.256	NaN	1612.2	30	0	334.32	0.143	+			18204	IMTGSYNNF	9	55	523.7342065757699	1045.4538602183397	2	523.7342529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IMTGSYNNF_	ENSG00000156475|ENST00000394411|PPP2R2B;ENSG00000175470|ENST00000455566|PPP2R2D;ENST00000490777.2_10:133754324-133769464:+|nuORF;nc|ENSG00000156475|Q00005-2|PPP2R2B;nc|ENSG00000156475|Q00005-3|PPP2R2B;nc|ENSG00000156475|Q00005-4|PPP2R2B;nc|ENSG00000156475|Q00005-5|PPP2R2B;nc|ENSG00000156475|Q00005-6|PPP2R2B;nc|ENSG00000156475|Q00005-7|PPP2R2B;PPP2R2B|p.G397Afs*31|1|0.1|ENSG00000156475|chr5:146590089-146590089|C/-|frameshift_variant	39.252832667884924	0.4290233611298554	6				NaN	NaN	0	NaN	12017	3951	15969
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15987	40.292	NaN	3100.3	30	0	683.58	0.215	+			45395	TVTSYVFLK	9	56	529.3002423028954	1056.5859316725907	2	529.3006591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVTSYVFLK_	ABCB6|p.G318Vfs*9|1|0.69|ENSG00000115657|chr2:219216381-219216381|C/-|frameshift_variant;ABCB6|p.G319Wfs*115|1|0.24|ENSG00000115657|chr2:219216380-219216381|-/C|frameshift_variant;ENSG00000115657|ENST00000265316|ABCB6;ENST00000417678.5_1_2:220079697-220081182:-|nuORF;ENST00000446716.5_1_2:220075515-220081188:-|nuORF;nc|ENSG00000115657|Q9NP58-4|ABCB6	52.936696900407355	0.27249468807391813	6				NaN	NaN	0	NaN	12031	3954	15986
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15988	40.296	NaN	4035.4	30	0	394.09	0.106	+			28044	NAAKVFNLY	9	67	520.282497093271	1038.550441253342	2	520.2822875976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NAAKVFNLY_	ENSG00000092964|ENST00000521913|DPYSL2;nc|ENSG00000092964|Q16555-2|DPYSL2;nc|ENSG00000092964|Q16555|DPYSL2	98.58198989935565	0.04066992115528678	6				NaN	NaN	0	NaN	12032	3954	15986
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15989	40.298	NaN	1268.5	30	0	219.44	0.033			+	26142	LSPWVSAN	8	42	437.22675581165277	NaN	0	437.2259521484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSPWVSAN_	REV__ENSG00000114745|ENST00000319283|GORASP1;REV__ENST00000441302.6_1_3:39139729-39142014:-|nuORF	38.80614096846853	1.7418937515398478	6				NaN	NaN	0	NaN	12033	3954	15986
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16007	40.335	NaN	10966	30	0	1873.6	0.214	+			35918	SEFPIRTL	8	63	481.7689961697124	961.5234394062248	2	481.768798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEFPIRTL_	CKAP5|p.V1971Lfs*42|1|0.03|ENSG00000175216|chr11:46744211-46744212|-/TTGAAAAAAAG|frameshift_variant;ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5	65.46538089061403	0.44767499471257033	6				NaN	NaN	0	NaN	12048	3957	16006
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16008	40.339	NaN	1742.9	30	0	284.11	0.106			+	44401	TSLLTAVV	8	44	402.2473848606337	802.4802167880674	2	402.2470397949219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TSLLTAVV_	REV__nc|ENSG00000179676|Q7Z4B0|LINC00305	74.51659920185547	0.36926395944126233	6				NaN	NaN	0	NaN	12049	3957	16006
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16009	40.341	NaN	10566	30	0	5501.1	0.106	+			31789	QPLKLDTSF	9	66	524.7874377682058	1047.5603226032115	2	524.7881469726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QPLKLDTSF_	ENSG00000126581|ENST00000590099|BECN1;ENST00000591307.5_1_17:40972740-40975895:-|nuORF	45.9519527083369	0.35044536499095585	6				NaN	NaN	0	NaN	12050	3957	16006
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16010	40.343	NaN	3233.3	30	0	693.97	0.106	+			43980	TPFVDPRVY	9	51	547.2877691346525	1092.560985336105	2	547.2880249023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TPFVDPRVY_	ENSG00000154310|ENST00000436636|TNIK;nc|ENSG00000154310|Q9UKE5-2|TNIK;nc|ENSG00000154310|Q9UKE5-3|TNIK;nc|ENSG00000154310|Q9UKE5-4|TNIK;nc|ENSG00000154310|Q9UKE5-5|TNIK;nc|ENSG00000154310|Q9UKE5-6|TNIK;nc|ENSG00000154310|Q9UKE5-7|TNIK;nc|ENSG00000154310|Q9UKE5-8|TNIK;TNIK|p.E1253Kfs*13|1|0.04|ENSG00000154310|chr3:171066678-171066678|C/-|frameshift_variant;TNIK|p.F1336Lfs*15|1|0.15|ENSG00000154310|chr3:171063956-171063956|A/-|frameshift_variant;TNIK|p.V1263Cfs*3|1|0.42|ENSG00000154310|chr3:171066648-171066648|C/-|frameshift_variant	39.252832667884924	0.4290233611298554	6				NaN	NaN	0	NaN	12051	3957	16006
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16011	40.345	NaN	641.93	30	0	60.327	0.106	+			26551	LTSHITVY	8	42	467.2545141912004	932.4944754492009	2	467.2540283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LTSHITVY_	tr|U7SM31|U7SM31_FUSNULipoprotein-releasingsystempermeaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02063PE=3SV=1	26.79610172149135	0.7524337208463756	6				NaN	NaN	0	NaN	12052	3957	16006
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16012	40.346	NaN	805.22	30	0	199.76	0.034	+			47121	VLNKKNVE	8	49	472.28209885894194	NaN	0	472.2822265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VLNKKNVE_	ENSG00000162607|ENST00000339950|USP1	33.51558372728122	1.7418937515398478	6				NaN	NaN	0	NaN	12053	3957	16006
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16013	40.347	NaN	245.2	30	0	53.774	0.138				-1	 	0	15	346.1744045129865	690.334256092773	2	346.17437744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12054	3957	16006
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16031	40.386	NaN	10145	30	0	1809.7	0.214	+			36999	SIPGGYNAL	9	59	446.2322305039087	890.4499080746174	2	446.2318115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIPGGYNAL_	ENSG00000135018|ENST00000376395|UBQLN1;ENSG00000160803|ENST00000368309|UBQLN4;ENSG00000188021|ENST00000338222|UBQLN2;ENST00000533705.5_1_9:86284090-86294929:-|nuORF;nc|ENSG00000135018|Q9UMX0-2|UBQLN1;nc|ENSG00000135018|Q9UMX0-3|UBQLN1;UBQLN2|p.N281Sfs*92|1|0.34|ENSG00000188021|chrX:56564713-56564725|GAATGCCGCACAA/-|frameshift_variant;UBQLN2|p.P525Lfs*71|10|0.37|ENSG00000188021|chrX:56565441-56565441|C/-|frameshift_variant;UBQLN4|p.A385Pfs*7|1|0.03|ENSG00000160803|chr1:156042886-156042887|GC/-|frameshift_variant;UBQLN4|p.R283H|1|0.14|ENSG00000160803|chr1:156048553-156048553|C/T|missense_variant	125.81401957644128	0.01768009863045738	6				NaN	NaN	0	NaN	12069	3960	16030
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16032	40.39	NaN	5803.3	30	0	815.58	0.106	+			41218	SVLENFVGR	9	69	510.77739536693815	1019.5402378006763	2	510.7774658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVLENFVGR_	DNM2|p.L793*|2|0.27|ENSG00000079805|chr19:10830206-10830206|C/-|frameshift_variant;DNM2|p.L793Pfs*31|1|0.35|ENSG00000079805|chr19:10830205-10830206|-/C|frameshift_variant;ENSG00000079805|ENST00000389253|DNM2;ENSG00000106976|ENST00000372923|DNM1;ENSG00000197959|ENST00000627582|DNM3;nc|ENSG00000079805|P50570-2|DNM2;nc|ENSG00000079805|P50570-3|DNM2;nc|ENSG00000079805|P50570-5|DNM2;nc|ENSG00000079805|P50570|DNM2;nc|ENSG00000106976|Q05193-2|DNM1;nc|ENSG00000106976|Q05193-3|DNM1;nc|ENSG00000106976|Q05193-5|DNM1;nc|ENSG00000197959|Q9UQ16-2|DNM3;nc|ENSG00000197959|Q9UQ16-4|DNM3;nc|ENSG00000197959|Q9UQ16-5|DNM3;nc|ENSG00000197959|Q9UQ16|DNM3	109.47833844074708	0.029530294723441826	6				NaN	NaN	0	NaN	12070	3960	16030
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16033	40.392	NaN	2268.4	30	0	424.85	0.106	+			17766	IESIVHAF	8	52	458.25015152045626	914.4857501077125	2	458.2500305175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IESIVHAF_	ENSG00000162928|ENST00000295030|PEX13	52.29916861842294	0.578018602984656	6				NaN	NaN	0	NaN	12071	3960	16030
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16034	40.394	NaN	2135.1	30	0	107.12	0.106	+			33208	RFFFRVFIFYY	11	58	535.6170622369866	1603.8293573111596	3	535.95166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RFFFRVFIFYY_	ENST00000220003.13_1_15:75095155-75095200:+|nuORF	6.659615375131196	0.8393058225873504	6				NaN	NaN	0	NaN	12072	3960	16030
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16035	40.395	NaN	1192.8	30	0	110.82	0.106			+	45397	TVTTNSLY	8	43	449.7294320990464	897.4443112648928	2	449.72918701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TVTTNSLY_	REV__ENSG00000226761|ENST00000533467|TAS2R46	35.200714571348534	0.6875396545722289	6				NaN	NaN	0	NaN	12073	3960	16030
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16036	40.397	NaN	1116	30	0	108.47	0.038	+			11535	FPFEKGSVQY	10	61	601.2983536214355	1200.5821543096708	2	601.2978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FPFEKGSVQY_	DEK|p.E372Sfs*2|1|0.2|ENSG00000124795|chr6:18226177-18226177|T/-|frameshift_variant;ENSG00000124795|ENST00000652689|DEK;nc|ENSG00000124795|P35659-2|DEK	60.11826168202944	0.36476464221954025	6				NaN	NaN	0	NaN	12074	3960	16030
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16054	40.434	NaN	52574	30	0	10418	0.214	+			7311	DASKVVTVF	9	83	483.2688045782976	964.5230562233952	2	483.2685852050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DASKVVTVF_	ENSG00000071127|ENST00000499869|WDR1;ENST00000502962.5_1_4:10077004-10094774:-|nuORF;ENST00000515743.5_1_4:10078742-10093271:-|nuORF;nc|ENSG00000071127|O75083-3|WDR1	122.93914200107957	0.019420478173996256	6				NaN	NaN	0	NaN	12089	3963	16053
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16055	40.438	NaN	4653.3	30	0	642.22	0.106	+			31646	QMSNITVTY	9	66	528.7555654484312	NaN	0	528.755615234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QMSNITVTY_	ENSG00000100028|ENST00000215829|SNRPD3;nc|ENSG00000286070|P62318-2|SNRPD3	82.24051045832904	0.06370642293906256	6				NaN	NaN	0	NaN	12090	3963	16053
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16056	40.44	NaN	1085.3	30	0	102.41	0.106	+			24370	LFQNKVIK	8	54	495.31096506413013	988.6073771950603	2	495.3104248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LFQNKVIK_	ENST00000295598.9_1_1:116926636-116926729:+|nuORF	38.80614096846853	0.6637206697844082	6				NaN	NaN	0	NaN	12091	3963	16053
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16057	40.442	NaN	1535.9	30	0	650.18	0.106	+			37749	SLTWGLGGPSQ	11	36	368.1881643867213	NaN	0	368.18817138671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLTWGLGGPSQ_	ENSG00000184923|ENST00000381707|NUTM2A;ENSG00000188199|ENST00000429828|NUTM2B;ENSG00000214562|ENST00000381697|NUTM2D;ENSG00000228570|ENST00000429984|NUTM2E	35.17822180527639	0.40864158092774266	6				NaN	NaN	0	NaN	12092	3963	16053
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16058	40.443	NaN	986.13	30	0	90.951	0.035			+	40533	SVAAIKALAH	10	50	490.7969055175781	NaN	0	490.7969055175781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVAAIKALAH_	REV__ENSG00000141161|ENST00000394570|UNC45B;REV__nc|ENSG00000141161|Q8IWX7-2|UNC45B;REV__nc|ENSG00000141161|Q8IWX7|UNC45B	21.9598887501803	0.4201028297492154	6				NaN	NaN	0	NaN	12093	3963	16053
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16076	40.479	NaN	49028	30	0	14408	0.214	+			35719	SDLKVIVM	8	77	452.7620613163302	903.5095696994604	2	452.7619934082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SDLKVIVM_	ENSG00000109606|ENST00000336812|DHX15	129.68262048586715	0.2207121622506348	6				NaN	NaN	0	NaN	12108	3966	16075
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16077	40.483	NaN	3150.2	30	0	517.56	0.106			+	-1	INGGVSIVF	9	55	474.2637435335762	946.5129341339524	2	474.2633056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))INGGVSIVF_	REV__HDX|p.N685Kfs*15|1|0.73|ENSG00000165259|chrX:84321907-84321908|-/T|frameshift_variant	53.351449002276354	0.2690372970092375	6				NaN	NaN	0	NaN	12109	3966	16075
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16078	40.485	NaN	8898.9	30	0	2424.7	0.106	+			45880	VANPNSAIF	9	62	466.7454679249434	931.4763829166868	2	466.7451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VANPNSAIF_	ENSG00000106682|ENST00000265753|EIF4H;nc|ENSG00000106682|Q15056-2|EIF4H	77.31757898189308	0.1091473830098891	6				NaN	NaN	0	NaN	12110	3966	16075
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16079	40.487	NaN	2088.5	30	0	173.07	0.106	+			27174	MDIVVHTL	8	52	464.25190298237925	926.4892530315585	2	464.2517395019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MDIVVHTL_	ENSG00000151502|ENST00000281187|VPS26B;ENST00000527586.1_1_11:134109936-134113358:+|nuORF;VPS26B|p.E144K|1|0.33|ENSG00000151502|chr11:134240040-134240040|G/A|missense_variant	111.64827973302667	0.24425243057279236	6				NaN	NaN	0	NaN	12111	3966	16075
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16080	40.489	NaN	2021.6	30	0	181.52	0.106	+			582	ADKSGDVYSF	10	63	544.748864942807	1087.483176952414	2	544.75	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ADKSGDVYSF_	ENSG00000160193|ENST00000398208|WDR4;nc|ENSG00000160193|P57081-2|WDR4	69.6276240434122	0.2803623802747859	6				NaN	NaN	0	NaN	12112	3966	16075
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16081	40.49	NaN	679.28	30	0	137.67	0.035			+	43775	TLINGFTFA	9	49	492.26376851347084	982.5129840937417	2	492.2635498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TLINGFTFA_	REV__ARHGAP29|p.K371Sfs*12|1|0.32|ENSG00000137962|chr1:94202575-94202575|T/-|frameshift_variant;REV__ARHGAP29|p.K679Rfs*35|1|0.28|ENSG00000137962|chr1:94184945-94184945|T/-|frameshift_variant;REV__ENSG00000137962|ENST00000260526|ARHGAP29;REV__nc|ENSG00000137962|Q52LW3-2|ARHGAP29	27.882242232435846	0.5426732730940306	6				NaN	NaN	0	NaN	12113	3966	16075
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16082	40.491	NaN	2189.6	30	0	224.87	0.141	+			41222	SVLEQSFLR	9	68	539.7984030998042	1077.5822532664083	2	539.7994995117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVLEQSFLR_	ENSG00000085840|ENST00000371568|ORC1;ORC1|p.N769K|1|0.24|ENSG00000085840|chr1:52374894-52374894|A/C|missense_variant	76.16968421966216	0.11411088698345859	6				NaN	NaN	0	NaN	12114	3966	16075
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16100	40.53	NaN	2828.8	30	0	514.81	0.214	+			28818	NPLEETSAL	9	54	487.2456008997036	972.4766488662073	2	487.2456970214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NPLEETSAL_	ENSG00000176945|ENST00000447234|MUC20;ENST00000457750.1_1_3:195341833-195346985:+|nuORF;nc|ENSG00000176945|Q8N307-3|MUC20	71.87747018426188	0.13267044672804276	6				NaN	NaN	0	NaN	12129	3969	16099
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16101	40.534	NaN	1897.9	30	0	232.95	0.106	+			8697	EEAQALAI	8	55	422.72417677671314	843.4338006202263	2	422.72406005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EEAQALAI_	ENSG00000172534|ENST00000310441|HCFC1;HCFC1|p.P1894Lfs*22|1|0.06|ENSG00000172534|chrX:153950835-153950835|G/-|frameshift_variant;nc|ENSG00000172534|P51610-2|HCFC1;nc|ENSG00000172534|P51610-4|HCFC1	85.35947970620816	0.2915182781752196	6				NaN	NaN	0	NaN	12130	3969	16099
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16102	40.536	NaN	1107.2	30	0	194.12	0.106	+			29693	PGVNNLTGL	9	43	442.7451171875	NaN	0	442.7451171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PGVNNLTGL_	ENSG00000107807|ENST00000370196|TLX1;nc|ENSG00000107807|P31314-2|TLX1	34.172542307311794	0.30503706118289736	6				NaN	NaN	0	NaN	12131	3969	16099
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16103	40.538	NaN	1327.1	30	0	85.562	0.106			+	25356	LPFKEPGLS	9	55	494.27845646921776	NaN	0	494.2793273925781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LPFKEPGLS_	REV__ENSG00000185666|ENST00000358763|SYN3	56.72105179125745	0.16330365735109603	6				NaN	NaN	0	NaN	12132	3969	16099
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16104	40.539	NaN	1950.9	30	0	145.66	0.036	+			43944	TPDEIDHVF	9	67	536.7510411052185	NaN	0	536.7508544921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TPDEIDHVF_	ENSG00000173193|ENST00000474629|PARP14;nc|ENSG00000173193|Q460N5-1|PARP14;nc|ENSG00000173193|Q460N5-4|PARP14;PARP14|p.N1416Efs*19|1|0.2|ENSG00000173193|chr3:122718388-122718389|-/A|frameshift_variant;PARP14|p.N415Mfs*3|1|0.05|ENSG00000173193|chr3:122699793-122699793|A/-|frameshift_variant	53.351449002276354	0.18359631779194618	6				NaN	NaN	0	NaN	12133	3969	16099
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16122	40.576	NaN	6873.4	30	0	1493.7	0.214	+			1290	AESKVFYL	8	66	478.75824416048386	955.5019353877677	2	478.7578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AESKVFYL_	ENSG00000164924|ENST00000395958|YWHAZ;ENST00000392459.3_1_6:127676988-127677414:+|nuORF;ENST00000440317.1_1_2:127315208-127315727:-|nuORF;ENST00000480304.5_1_8:101936173-101961117:-|nuORF;ENST00000517727.5_1_8:101936341-101962760:-|nuORF;nc|ENSG00000164924|P63104-2|YWHAZ	90.36981228632155	0.27635063874291205	6				NaN	NaN	0	NaN	12148	3972	16121
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16123	40.579	NaN	2120.6	30	0	296.62	0.034	+			27169	MDFTAARL	8	50	462.73410007243245	923.4536472116649	2	462.73406982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MDFTAARL_	ENSG00000102580|ENST00000602402|DNAJC3	67.49366992349736	0.4277823096851425	6				NaN	NaN	0	NaN	12149	3972	16121
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16141	40.616	NaN	2986.2	30	0	435.22	0.214	+			24069	LEKAKAKEP	9	67	507.30321363573086	1012.5918743382617	2	507.3031005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LEKAKAKEP_	ENST00000574864.1_1_6:137221518-137222013:-|nuORF	44.377184641726394	0.36891676396732553	6				NaN	NaN	0	NaN	12164	3975	16140
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16142	40.62	NaN	1397.9	30	0	174.42	0.106	+			27540	MPAVKAIIY	9	57	503.29403360890956	1004.5735142846191	2	503.29388427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MPAVKAIIY_	ENSG00000079459|ENST00000220584|FDFT1;ENST00000446331.6_1_8:11660331-11696115:+|nuORF;nc|ENSG00000079459|P37268-2|FDFT1;nc|ENSG00000079459|P37268-3|FDFT1;nc|ENSG00000079459|P37268-4|FDFT1;nc|ENSG00000079459|P37268-5|FDFT1	47.91560031466742	0.327412564698279	6				NaN	NaN	0	NaN	12165	3975	16140
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16143	40.622	NaN	1176.1	30	0	210.85	0.035			+	47811	VSKCPKIPE	9	63	500.7760116609869	NaN	0	500.7757263183594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSKCPKIPE_	REV__ENSG00000162998|ENST00000295113|FRZB;REV__FRZB|p.S241Kfs*38|1|0.02|ENSG00000162998|chr2:182838485-182838486|-/ATAACTACTTT|frameshift_variant	33.921630207806714	0.3063038642147651	6				NaN	NaN	0	NaN	12166	3975	16140
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16158	40.652	NaN	2761.2	30	0	294.44	0.214	+			8899	EETVRIVAL	9	63	515.3006123303232	1028.5866717274464	2	515.3004150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EETVRIVAL_	ENSG00000087077|ENST00000200457|TRIP6;ENSG00000145012|ENST00000617246|LPP;ENST00000476870.5_1_7:100468185-100470922:+|nuORF;ENST00000488670.1_1_7:100469170-100470405:+|nuORF	96.19043198914106	0.047412499214244314	6				NaN	NaN	0	NaN	12178	3978	16157
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16159	40.656	NaN	1205	30	0	104.47	0.106			+	10395	EVDVGVVQHC	10	55	542.760601802532	1083.506650671864	2	542.7603149414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EVDVGVVQHC_	REV__ENSG00000187609|ENST00000340951|EXD3;REV__ENST00000478344.6_1_9:140240296-140248823:-|nuORF;REV__ENST00000487745.5_1_9:140201404-140247406:-|nuORF;REV__ENST00000491734.6_1_9:140201404-140249090:-|nuORF;REV__nc|ENSG00000187609|Q8N9H8-2|EXD3;REV__nc|ENSG00000187609|Q8N9H8-3|EXD3	35.17822180527639	0.5925517082438457	6				NaN	NaN	0	NaN	12179	3978	16157
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16160	40.658	NaN	1736.2	30	0	151.52	0.106	+			28045	NAAKVFNLY	9	64	520.282497093271	1038.550441253342	2	520.2816772460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NAAKVFNLY_	ENSG00000092964|ENST00000521913|DPYSL2;nc|ENSG00000092964|Q16555-2|DPYSL2;nc|ENSG00000092964|Q16555|DPYSL2	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	12180	3978	16157
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16161	40.66	NaN	1638	30	0	213.07	0.035			+	23558	LALCNSSRK	9	63	496.2704895041891	990.5264260751782	2	496.27008056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LALCNSSRK_	REV__ENSG00000153303|ENST00000283309|FRMD1;REV__nc|ENSG00000153303|Q8N878-2|FRMD1	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	12181	3978	16157
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16179	40.697	NaN	11864	30	0	2711.4	0.214	+			18850	IVALILSTK	9	66	479.3208489583821	956.6271449835642	2	479.3205261230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IVALILSTK_	ENSG00000185883|ENST00000330398|ATP6V0C	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	12196	3981	16178
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16180	40.7	NaN	1239.4	30	0	126.13	0.106			+	8000	DTILQALF	8	52	460.75949553551146	NaN	0	460.7595520019531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DTILQALF_	REV__ROBO1|p.P29T|1|0.3|ENSG00000169855|chr3:79589827-79589827|G/T|missense_variant	51.33545320467046	1.7418937515398478	6				NaN	NaN	0	NaN	12197	3981	16178
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16181	40.702	NaN	532.94	30	0	32.012	0.106			+	26511	LTPAGSPPS	9	35	413.7188720703125	NaN	0	413.7188720703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LTPAGSPPS_	REV__ENST00000356311.9_2_9:135754299-135759312:+|nuORF	30.503639358989545	0.3235605894931338	6				NaN	NaN	0	NaN	12198	3981	16178
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16182	40.704	NaN	625.88	30	0	37.887	0.106			+	-1	CTSCCHSGCWC	11	46	680.7042236328125	NaN	0	680.7042236328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	3 Carbamidomethyl (C)	_C(Carbamidomethyl (C))TSC(Carbamidomethyl (C))C(Carbamidomethyl (C))HSGCWC_	REV__ENST00000314742.12_2_15:101120688-101120928:-|nuORF	5.921104790170933	0.456735970842152	6				NaN	NaN	0	NaN	12199	3981	16178
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16183	40.706	NaN	660.6	30	0	63.521	0.106			+	18580	ISPMNAQL	8	45	437.2272644042969	NaN	0	437.2272644042969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ISPMNAQL_	REV__APC|p.P2216S|1|0.15|ENSG00000134982|chr5:112842240-112842240|C/T|missense_variant;REV__ENSG00000134982|ENST00000257430|APC;REV__nc|ENSG00000134982|P25054-2|APC;REV__nc|ENSG00000134982|P25054-3|APC	45.9519527083369	1.7418937515398478	6				NaN	NaN	0	NaN	12200	3981	16178
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16184	40.708	NaN	1160.7	30	0	90.488	0.034	+			37536	SLLSGLLIK	9	53	472.3131103515625	NaN	0	472.3131103515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLLSGLLIK_	ENSG00000117020|ENST00000673466|AKT3;nc|ENSG00000117020|Q9Y243-2|AKT3	37.15910966729921	0.2899585034171616	6				NaN	NaN	0	NaN	12201	3981	16178
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16202	40.745	NaN	19681	30	0	3104.6	0.214	+			40640	SVAQLLLSK	9	73	479.8005936930928	957.5866344529857	2	479.8001708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVAQLLLSK_	ENSG00000073614|ENST00000399788|KDM5A;ENST00000541335.1_1_12:431581-432275:-|nuORF;KDM5A|p.G1200Dfs*9|1|0.28|ENSG00000073614|chr12:307787-307787|T/-|frameshift_variant;KDM5A|p.V1093*|1|0.32|ENSG00000073614|chr12:309905-309905|T/-|frameshift_variant;KDM5A|p.V1093Sfs*20|1|0.21|ENSG00000073614|chr12:309904-309905|-/T|frameshift_variant;nc|ENSG00000073614|P29375-2|KDM5A	107.45493779368988	0.031594950556992824	6				NaN	NaN	0	NaN	12216	3984	16201
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16203	40.748	NaN	3247.3	30	0	888.91	0.106	+			16998	HPSNVLHFF	9	60	549.2806931221389	NaN	0	549.2800903320312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HPSNVLHFF_	ENSG00000104824|ENST00000221419|HNRNPL;ENST00000568980.1_1_15:34781237-34781759:-|nuORF;ENST00000595164.5_1_19:39327364-39331218:-|nuORF;ENST00000595443.5_1_19:39327988-39329682:-|nuORF;ENST00000597731.1_1_19:39327364-39331218:-|nuORF;nc|ENSG00000104824|P14866-2|HNRNPL	90.60085204095205	0.040385177724871185	6				NaN	NaN	0	NaN	12217	3984	16201
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16204	40.75	NaN	1086.6	30	0	120.39	0.106			+	36983	SINPYAGGL	9	43	446.2322305039087	890.4499080746174	2	446.23187255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SINPYAGGL_	REV__nc|ENSG00000069869|P46934-2|NEDD4;REV__nc|ENSG00000069869|P46934-3|NEDD4;REV__nc|ENSG00000069869|P46934|NEDD4	51.33545320467046	0.2872990594074956	6				NaN	NaN	0	NaN	12218	3984	16201
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16205	40.752	NaN	2881.6	30	0	265.49	0.035	+			44321	TSFISPFAK	9	59	499.271956064844	996.529359196488	2	499.27142333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TSFISPFAK_	ENSG00000198682|ENST00000456849|PAPSS2;nc|ENSG00000198682|O95340|PAPSS2	52.936696900407355	0.27249468807391813	6				NaN	NaN	0	NaN	12219	3984	16201
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16223	40.88	NaN	930.31	30	0	130.85	0.142			+	25772	LSALKLLAP	9	47	463.30792236328125	NaN	0	463.30792236328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSALKLLAP_	REV__ENST00000342584.3_1_5:473081-473207:-|nuORF	29.14955571784316	0.3303970763161698	6				NaN	NaN	0	NaN	12234	3987	16222
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16241	40.919	NaN	33450	30	0	3914.6	0.214	+			8472	EASKLLLTY	9	72	519.29764085249	1036.5807287717798	2	519.2977905273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EASKLLLTY_	ENSG00000151092|ENST00000280700|NGLY1;ENST00000463611.1_1_3:25824608-25824881:-|nuORF;ENST00000474611.1_1_3:25819310-25824959:-|nuORF;ENST00000478991.1_1_3:25819998-25824881:-|nuORF;ENST00000493324.5_1_3:25778798-25824881:-|nuORF;nc|ENSG00000151092|Q96IV0-2|NGLY1;nc|ENSG00000151092|Q96IV0-3|NGLY1;NGLY1|p.I101Nfs*3|1|0.22|ENSG00000151092|chr3:25764256-25764257|-/T|frameshift_variant	205.58201149802446	9.704336011985736E-06	6				NaN	NaN	0	NaN	12249	3990	16240
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16242	40.923	NaN	2342.6	30	0	454.28	0.106	+			17708	IEMKVVSL	8	62	459.76988008416265	917.5252072351253	2	459.7697448730469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IEMKVVSL_	ENSG00000131941|ENST00000254260|RHPN2;ENST00000591502.1_1_19:33481365-33482797:-|nuORF;ENST00000592247.1_1_19:33470904-33481620:-|nuORF;nc|ENSG00000131941|Q8IUC4-2|RHPN2;nc|ENSG00000258628|A8MT19|RHPN2P1	60.11826168202944	0.5006107059937851	6				NaN	NaN	0	NaN	12250	3990	16240
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16243	40.925	NaN	3145.7	30	0	727.82	0.106	+			42445	TALSSFLTK	9	53	484.2763538297143	966.5381547262286	2	484.2757263183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TALSSFLTK_	ENSG00000132382|ENST00000254718|MYBBP1A;ENST00000574547.5_1_17:4442712-4447986:-|nuORF;nc|ENSG00000132382|Q9BQG0-2|MYBBP1A	52.936696900407355	0.27249468807391813	6				NaN	NaN	0	NaN	12251	3990	16240
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16244	40.927	NaN	2283.8	30	0	213.79	0.106	+			3574	ASVAWAVLK	9	62	472.7812491595648	943.5479453859297	2	472.78131103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASVAWAVLK_	ENSG00000106714|ENST00000297668|CNTNAP3;ENSG00000154529|ENST00000377561|CNTNAP3B;ENSG00000283378|ENST00000636699|CNTNAP3C;nc|ENSG00000154529|Q96NU0-2|CNTNAP3B;nc|ENSG00000283378|Q9BZ76-2|CNTNAP3	66.42927471994793	0.16001998865088202	6				NaN	NaN	0	NaN	12252	3990	16240
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16245	40.928	NaN	1918.7	30	0	413.74	0.106	+			26712	LVKDGEHVI	9	50	505.28948052558	1008.56440811796	2	505.2893371582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LVKDGEHVI_	ENSG00000005249|ENST00000265717|PRKAR2B	42.396135135203025	0.392153681582562	6				NaN	NaN	0	NaN	12253	3990	16240
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16246	40.93	NaN	982.77	30	0	116.29	0.034			+	6853	CKLVWLVL	8	47	487.299662448316	NaN	0	487.2998352050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_CKLVWLVL_	REV__MSH2|p.V102Ifs*75|1|0.05|ENSG00000095002|chr2:47408491-47408492|-/GATATTAC|frameshift_variant	42.47446043378293	1.7418937515398478	6				NaN	NaN	0	NaN	12254	3990	16240
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16247	40.931	NaN	1012.8	30	0	129.5	0.14			+	37633	SLQGPSLKPP	10	52	512.297429991058	NaN	0	512.297607421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SLQGPSLKPP_	REV__nc|ENSG00000180525|Q8N8Z3|DIP2C-AS1	30.568863376406313	0.39980281766270914	6				NaN	NaN	0	NaN	12255	3990	16240
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16265	40.969	NaN	3313.4	30	0	490.52	0.214	+			22505	KTPPLATQEA	10	61	528.2919879513105	1054.5694229694209	2	528.2916870117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTPPLATQEA_	ENSG00000169203|ENST00000550665|NPIPB12;ENSG00000169246|ENST00000542817|NPIPB3;ENSG00000185864|ENST00000682606|NPIPB4;ENSG00000196436|ENST00000692376|NPIPB15;ENSG00000196993|ENST00000357796|NPIPB9;ENSG00000198064|ENST00000697092|NPIPB13;ENSG00000198156|ENST00000695563|NPIPB6;ENSG00000233232|ENST00000452313|NPIPB7;ENSG00000234719|ENST00000399147|NPIPB2;ENSG00000243716|ENST00000424340|NPIPB5;ENSG00000254206|ENST00000698511|NPIPB11;ENSG00000255524|ENST00000683297|NPIPB8;ENST00000547442.5_1_18:11619510-11619729:-|nuORF;nc|ENSG00000169246|Q92617-2|NPIPB3;nc|ENSG00000169246|Q92617-3|NPIPB3;nc|ENSG00000169246|Q92617-5|NPIPB3;nc|ENSG00000169246|Q92617-6|NPIPB3;nc|ENSG00000169246|Q92617|NPIPB3;nc|ENSG00000243716|C9JG80|NPIPB4	31.529811441608018	0.6223461015008678	6				NaN	NaN	0	NaN	12270	3993	16264
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16266	40.973	NaN	1051.1	30	0	80.163	0.106	+			35079	SAFLCGVMK	9	48	478.24062493070835	954.4666969282167	2	478.23272705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAFLCGVMK_	ENSG00000125944|ENST00000302271|HNRNPR;ENSG00000135316|ENST00000369622|SYNCRIP;HNRNPR|p.L367Qfs*19|1|0.05|ENSG00000125944|chr1:23313620-23313621|-/TTTAATCTCT|frameshift_variant;HNRNPR|p.W594Gfs*15|1|0.23|ENSG00000125944|chr1:23310575-23310576|CA/-|frameshift_variant;nc|ENSG00000125944|O43390-2|HNRNPR;nc|ENSG00000125944|O43390-3|HNRNPR;nc|ENSG00000271793|O60506-2|SYNCRIP;nc|ENSG00000271793|O60506-3|SYNCRIP;nc|ENSG00000271793|O60506-4|SYNCRIP	27.882242232435846	0.5426732730940306	6				NaN	NaN	0	NaN	12271	3993	16264
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16267	40.975	NaN	2246.5	30	0	478.64	0.036	+			26090	LSMVKIVNY	9	59	533.8003844744626	1065.586216015725	2	533.7996826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSMVKIVNY_	ENSG00000157077|ENST00000287727|ZFYVE9;ENST00000416133.1_1_X:136742915-136743272:+|nuORF;nc|ENSG00000157077|O95405-2|ZFYVE9	38.80614096846853	0.43426287593479557	6				NaN	NaN	0	NaN	12272	3993	16264
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16285	41.013	NaN	4145	30	0	780.24	0.214	+			25559	LPWEVQRY	8	63	545.7880490604745	1089.5615451877488	2	545.7880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LPWEVQRY_	ENSG00000140279|ENST00000389039|DUOX2;nc|ENSG00000140279|Q9NRD8|DUOX2	82.24051045832904	0.30490469762271794	6				NaN	NaN	0	NaN	12287	3996	16284
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16286	41.016	NaN	3985.4	30	0	513.75	0.106	+			5285	ATVIFIVTK	9	65	496.3133391063895	990.612125279579	2	496.3127746582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATVIFIVTK_	ENSG00000171234|ENST00000305231|UGT2B7	68.84614121027924	0.14577793175421136	6				NaN	NaN	0	NaN	12288	3996	16284
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16287	41.018	NaN	1766.3	30	0	216.57	0.106	+			30261	PTATSPVVY	9	53	467.7481460295207	933.4817391258414	2	467.74774169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PTATSPVVY_	ENSG00000124789|ENST00000262077|NUP153;nc|ENSG00000124789|P49790-2|NUP153;nc|ENSG00000124789|P49790-3|NUP153;NUP153|p.E1073Kfs*44|1|0.07|ENSG00000124789|chr6:17628983-17628983|T/-|frameshift_variant	57.81127852772723	0.2318599694398087	6				NaN	NaN	0	NaN	12289	3996	16284
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16288	41.02	NaN	1360.9	30	0	415.42	0.037			+	-1	WMLLKKLPN	9	59	579.8402679013789	NaN	0	579.8401489257812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_WM(Oxidation (M))LLKKLPN_	REV__ENST00000546604.5_1_12:56189840-56194394:-|nuORF	30.503639358989545	0.3235605894931338	6				NaN	NaN	0	NaN	12290	3996	16284
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16306	41.058	NaN	7581.7	30	0	1734.9	0.214	+			18257	IPDKFVVGY	9	74	519.2874914375527	1036.5604299419053	2	519.287353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IPDKFVVGY_	ENSG00000165704|ENST00000298556|HPRT1	104.74654710444128	0.034358562718640136	6				NaN	NaN	0	NaN	12305	3999	16305
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16307	41.061	NaN	3428.6	30	0	292.41	0.106	+			3723	ATAAVIFLH	9	53	471.7739892578199	941.5334255824398	2	471.7738037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATAAVIFLH_	ENSG00000120992|ENST00000316963|LYPLA1;ENST00000517297.5_1_8:54967680-55014407:-|nuORF;ENST00000519926.5_1_8:54966225-55014407:-|nuORF;ENST00000521856.1_1_8:55013466-55014395:-|nuORF;nc|ENSG00000120992|O75608-2|LYPLA1	143.97458802002905	0.008615427130953528	6				NaN	NaN	0	NaN	12306	3999	16305
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16308	41.063	NaN	1674	30	0	397.41	0.033			+	35362	SAPPLSVPL	9	35	440.76055317190355	879.5065534106071	2	440.76031494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAPPLSVPL_	REV__DACH2|p.I497Kfs*24|1|0.17|ENSG00000126733|chrX:86813216-86813217|-/AG|frameshift_variant;REV__DACH2|p.T525Pfs*33|2|0.19|ENSG00000126733|chrX:86814717-86814717|A/-|frameshift_variant;REV__ENSG00000126733|ENST00000373125|DACH2;REV__nc|ENSG00000126733|Q96NX9-2|DACH2;REV__nc|ENSG00000126733|Q96NX9-3|DACH2;REV__nc|ENSG00000126733|Q96NX9-4|DACH2	31.954861631926434	0.5046124803899898	6				NaN	NaN	0	NaN	12307	3999	16305
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16326	41.101	NaN	3608.9	30	0	1140	0.214	+			2892	ASATAFFLK	9	59	478.2659953004321	954.5174376676642	2	478.26556396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASATAFFLK_	ENST00000225726.9_1_17:61843531-61850919:-|nuORF	107.00750918261382	0.032051501805654005	6				NaN	NaN	0	NaN	12322	4002	16325
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16327	41.104	NaN	1245.3	30	0	397.9	0.036				-1	DGPYKCKLC	9	51	542.2511596679688	NaN	0	542.2511596679688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_DGPYKCKLC(Carbamidomethyl (C))_	ENSG00000180855|ENST00000301547|ZNF443;ENSG00000196466|ENST00000430385|ZNF799;ENSG00000197933|ENST00000341191|ZNF823;ENST00000435033.1_1_19:12491157-12492084:-|nuORF;nc|ENSG00000196466|Q96GE5-2|ZNF799;nc|ENSG00000197933|P16415-2|ZNF823;ZNF443|p.W208Gfs*34|1|0.3|ENSG00000180855|chr19:12431550-12431550|A/-|frameshift_variant	30.503639358989545	0.3235605894931338	6				NaN	NaN	0	NaN	12323	4002	16325
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16345	41.141	NaN	8325.4	30	0	1449.2	0.214	+			4163	ATFFGEVVK	9	62	499.27149646835784	996.5284400035157	2	499.2715148925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATFFGEVVK_	ENSG00000183527|ENST00000331573|PSMG1;nc|ENSG00000183527|O95456-2|PSMG1;PSMG1|p.T194Hfs*13|1|0.12|ENSG00000183527|chr21:39178524-39178524|T/-|frameshift_variant	101.25262130126117	0.03792372629710479	6				NaN	NaN	0	NaN	12338	4005	16344
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16346	41.145	NaN	3256.7	30	0	416.43	0.106	+			3562	ASTPFQNIL	9	56	495.76694319775976	989.5193334623195	2	495.7669982910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASTPFQNIL_	ENSG00000110427|ENST00000658780|KIAA1549L;KIAA1549L|p.T1376Hfs*62|1|0.19|ENSG00000110427|chr11:33606771-33606772|-/C|frameshift_variant;KIAA1549L|p.T1376Pfs*16|1|0.38|ENSG00000110427|chr11:33606772-33606772|C/-|frameshift_variant;nc|ENSG00000110427|Q6ZVL6-2|KIAA1549L;nc|ENSG00000110427|Q6ZVL6|KIAA1549L	54.776311868738084	0.25715957988447635	6				NaN	NaN	0	NaN	12339	4005	16344
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16347	41.147	NaN	1684.2	30	0	419.19	0.106	+			29907	PLPRLLLHG	9	52	508.3234212992462	1014.6322896652924	2	508.3236083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PLPRLLLHG_	ENST00000302625.5_1_2:219825213-219826146:+|nuORF	31.954861631926434	0.5046124803899898	6				NaN	NaN	0	NaN	12340	4005	16344
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16348	41.149	NaN	1561.2	30	0	195.65	0.034	+			28228	NAVVTVPAY	9	54	467.2551270283148	NaN	0	467.2556457519531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NAVVTVPAY_	ENSG00000109971|ENST00000534624|HSPA8;ENST00000454171.1_1_7:84657519-84657798:+|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000532167.5_1_11:122930757-122931830:-|nuORF;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;HSPA8|p.K569Dfs*6|1|0.3|ENSG00000109971|chr11:123058302-123058303|TC/-|frameshift_variant;nc|ENSG00000109971|P11142-2|HSPA8	64.20726635412375	0.13137488984569443	6				NaN	NaN	0	NaN	12341	4005	16344
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16365	41.184	NaN	1034.6	30	0	137.08	0.214			+	34004	RSHTGRGGF	9	50	487.7511422721845	973.487731611169	2	487.7506408691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RSHTGRGGF_	REV__ENST00000379731.4_1_9:33113141-33113378:-|nuORF	39.252832667884924	0.4290233611298554	6				NaN	NaN	0	NaN	12355	4008	16364
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16366	41.188	NaN	694.99	30	0	60.628	0.034	+			13062	GFEKLAGTT	9	40	462.24542236328125	NaN	0	462.24542236328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GFEKLAGTT_	ENST00000339554.7_2_9:140342831-140343164:-|nuORF	35.61828744233558	0.29773779453147337	6				NaN	NaN	0	NaN	12356	4008	16364
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16384	41.225	NaN	8024.1	30	0	2026.3	0.214	+			28812	NPITVQTVY	9	58	517.7792996946829	1033.5440464561657	2	517.7794799804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NPITVQTVY_	ENSG00000189067|ENST00000622633|LITAF;nc|ENSG00000189067|Q99732-2|LITAF;nc|ENSG00000189067|Q99732-3|LITAF	93.19546047674547	0.05585629608842056	6				NaN	NaN	0	NaN	12371	4011	16383
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16385	41.228	NaN	5045.4	30	0	448.04	0.106	+			44029	TPMFVVKAY	9	72	528.2832187103036	1054.551884487407	2	528.283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TPMFVVKAY_	ENSG00000167658|ENST00000309311|EEF2	110.11987700582712	0.028875675806141952	6				NaN	NaN	0	NaN	12372	4011	16383
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16386	41.23	NaN	5459.1	30	0	1968.8	0.036			+	37617	SLPYKCIIQ	9	60	532.7953928089912	1063.5762326847823	2	532.7960815429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLPYKCIIQ_	REV__GNPAT|p.L587P|1|0.34|ENSG00000116906|chr1:231275237-231275237|T/C|missense_variant	84.9155231211612	0.07920012719736333	6				NaN	NaN	0	NaN	12373	4011	16383
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16403	41.265	NaN	2668.2	30	0	739.3	0.214	+			2306	AMGDVVIFK	9	56	490.2679088090385	978.521264684877	2	490.2674255371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AMGDVVIFK_	ENSG00000163946|ENST00000683822|TASOR;nc|ENSG00000163946|Q9UK61-3|TASOR;nc|ENSG00000163946|Q9UK61-4|TASOR	85.16082228582465	0.07850854922700509	6				NaN	NaN	0	NaN	12387	4014	16402
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16404	41.269	NaN	1834	30	0	237.6	0.106	+			45468	TYAPVKSFL	9	55	513.2869165170742	NaN	0	513.2869873046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TYAPVKSFL_	ENSG00000157350|ENST00000342907|ST3GAL2	42.86426827375447	0.2558691296974908	6				NaN	NaN	0	NaN	12388	4014	16402
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16405	41.271	NaN	1066.1	30	0	127.39	0.106	+			5805	AVIEDTWHY	9	52	567.2673768572091	NaN	0	567.266845703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVIEDTWHY_	ENSG00000052802|ENST00000261507|MSMO1;nc|ENSG00000052802|Q15800-2|MSMO1	51.33545320467046	0.19748963086191895	6				NaN	NaN	0	NaN	12389	4014	16402
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16406	41.273	NaN	1322.7	30	0	110.25	0.035	+			27547	MPDVVVRSF	9	51	525.2764106617299	1048.5382683902596	2	525.2766723632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MPDVVVRSF_	ENSG00000160563|ENST00000292035|MED27;ENST00000514280.1_1_5:79646842-79647379:-|nuORF;nc|ENSG00000160563|Q6P2C8-2|MED27	38.753607047826485	0.4348790777924195	6				NaN	NaN	0	NaN	12390	4014	16402
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16424	41.31	NaN	3109.8	30	0	533.49	0.215			+	49523	VYAGGFTL	8	50	414.218617370262	826.422681807324	2	414.2185363769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYAGGFTL_	REV__ENSG00000108576|ENST00000650711|SLC6A4;REV__nc|ENSG00000108576|P31645-2|SLC6A4;REV__SLC6A4|p.I581Mfs*24|1|0.05|ENSG00000108576|chr17:30203246-30203247|CT/-|frameshift_variant	49.21078951299608	0.5991576752473486	6				NaN	NaN	0	NaN	12405	4017	16423
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16425	41.313	NaN	2405	30	0	993.35	0.106	+			36704	SGSFPLVLK	9	53	474.281633360023	946.5487137868461	2	474.2813415527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SGSFPLVLK_	ENSG00000167074|ENST00000266304|TEF	79.71258880314673	0.09879134589249085	6				NaN	NaN	0	NaN	12406	4017	16423
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16426	41.315	NaN	1311.4	30	0	207.37	0.034	+			46817	VIAQLTIIP	9	57	484.3130308755101	966.6115088178202	2	484.3127136230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VIAQLTIIP_	ENST00000537589.1_2_2:65301228-65301667:+|nuORF	38.80614096846853	0.43426287593479557	6				NaN	NaN	0	NaN	12407	4017	16423
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16444	41.353	NaN	3732.5	30	0	816.84	0.214	+			46216	VEAGLQIPA	9	45	449.25534557077185	896.4961382083437	2	449.25537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VEAGLQIPA_	ENSG00000039068|ENST00000261769|CDH1;ENST00000562118.1_1_16:68857288-68867399:+|nuORF;ENST00000562836.5_1_16:68797408-68867399:+|nuORF;nc|ENSG00000039068|P12830-2|CDH1	47.657333605630114	0.33044192980041115	6				NaN	NaN	0	NaN	12422	4020	16443
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16445	41.357	NaN	2002.5	30	0	479.83	0.106	+			49885	VYTSGIYNV	9	63	508.2582352901393	NaN	0	508.2579040527344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYTSGIYNV_	ENSG00000136205|ENST00000311160|TNS3;nc|ENSG00000136205|Q68CZ2-2|TNS3;nc|ENSG00000136205|Q68CZ2-3|TNS3;nc|ENSG00000136205|Q68CZ2-4|TNS3;TNS3|p.L1417Cfs*22|1|0.13|ENSG00000136205|chr7:47278165-47278165|G/-|frameshift_variant;TNS3|p.Q372Rfs*46|1|0.1|ENSG00000136205|chr7:47369532-47369532|G/-|frameshift_variant;TNS3|p.S1335Gfs*89|1|0.09|ENSG00000136205|chr7:47283791-47283792|-/CAGGGCCTTCATCCTGGACCAGGGTGATGCC|frameshift_variant	39.252832667884924	0.27938773122138094	6				NaN	NaN	0	NaN	12423	4020	16443
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16446	41.359	NaN	1445.3	30	0	467.48	0.106	+			24176	LEPHRPGSLP	10	48	551.802734375	NaN	0	551.802734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LEPHRPGSLP_	ENST00000412901.5_1_3:9965766-9969866:+|nuORF	31.529811441608018	0.39664753963064203	6				NaN	NaN	0	NaN	12424	4020	16443
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16447	41.36	NaN	1709.3	30	0	228.46	0.033			+	9163	EGNVKLNM	8	52	452.73155248276754	NaN	0	452.7312927246094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EGNVKLNM_	REV__ATXN2L|p.S217L|1|0.12|ENSG00000168488|chr16:28826895-28826895|C/T|missense_variant	53.351449002276354	1.7418937515398478	6				NaN	NaN	0	NaN	12425	4020	16443
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16465	41.398	NaN	2679.3	30	0	383.56	0.214			+	31181	QGNARLLDF	9	61	517.2748448045718	NaN	0	517.2745361328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QGNARLLDF_	REV__ENSG00000145725|ENST00000358359|PPIP5K2;REV__nc|ENSG00000145725|O43314-2|PPIP5K2;REV__PPIP5K2|p.L906Cfs*40|1|0.19|ENSG00000145725|chr5:103177941-103177941|T/-|frameshift_variant;REV__PPIP5K2|p.V1179Yfs*3|2|0.15|ENSG00000145725|chr5:103194934-103194934|A/-|frameshift_variant	64.20726635412375	0.13137488984569443	6				NaN	NaN	0	NaN	12440	4023	16464
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16466	41.401	NaN	3493.1	30	0	531.45	0.034	+			2186	ALNAGSYASL	10	60	483.74816256932354	965.4817722054471	2	483.74786376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ALNAGSYASL_	CLASP2|p.L1169Ffs*6|1|0.14|ENSG00000163539|chr3:33510729-33510730|-/A|frameshift_variant;CLASP2|p.M744Nfs*4|1|0.19|ENSG00000163539|chr3:33560868-33560869|-/T|frameshift_variant;CLASP2|p.M744Wfs*33|2|0.29|ENSG00000163539|chr3:33560869-33560869|T/-|frameshift_variant;ENSG00000163539|ENST00000682230|CLASP2;nc|ENSG00000163539|O75122-2|CLASP2;nc|ENSG00000163539|O75122-3|CLASP2;nc|ENSG00000163539|O75122|CLASP2	83.6470233535746	0.16744595502813267	6				NaN	NaN	0	NaN	12441	4023	16464
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16500	41.474	NaN	2347.4	30	0	598.22	0.214	+			22093	KSMFLTVKI	9	58	533.8200454082817	1065.6255378833632	2	533.82080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSMFLTVKI_	DSCAML1|p.M1051Wfs*8|3|0.26|ENSG00000177103|chr11:117469970-117469970|C/-|frameshift_variant;DSCAML1|p.P1274Lfs*7|2|0.3|ENSG00000177103|chr11:117450616-117450616|G/-|frameshift_variant;DSCAML1|p.P2046Qfs*45|1|0.5|ENSG00000177103|chr11:117428533-117428533|G/-|frameshift_variant;DSCAML1|p.S2067Afs*24|1|0.48|ENSG00000177103|chr11:117428472-117428472|G/-|frameshift_variant;ENSG00000177103|ENST00000651296|DSCAML1;nc|ENSG00000177103|Q8TD84-2|DSCAML1	98.62937762414208	0.04060045538121712	6				NaN	NaN	0	NaN	12469	4029	16499
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16501	41.477	NaN	2975	30	0	401.26	0.106			+	14218	GSSLLEAVKL	10	63	508.8026285549822	1015.5907041767645	2	508.802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSSLLEAVKL_	REV__ENSG00000177169|ENST00000321867|ULK1;REV__ENST00000540647.5_1_12:132402872-132405903:+|nuORF;REV__ENST00000544718.1_1_12:132403795-132404230:+|nuORF	49.536043120802724	0.461275219792494	6				NaN	NaN	0	NaN	12470	4029	16499
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16502	41.48	NaN	1617.3	30	0	512.52	0.035	+			47576	VRLGPSSGLL	10	51	499.802813142773	NaN	0	499.8033752441406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VRLGPSSGLL_	ENSG00000164880|ENST00000404767|INTS1	51.19269402634007	0.2980620950593832	6				NaN	NaN	0	NaN	12471	4029	16499
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16520	41.516	NaN	6384.8	30	0	614.94	0.214	+			43976	TPFKGGTLF	9	61	484.2660628706384	966.5175728080768	2	484.26568603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TPFKGGTLF_	nc|ENSG00000120802|P42166|TMPO	87.69643885390035	0.07135982304947239	6				NaN	NaN	0	NaN	12486	4032	16519
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16521	41.52	NaN	2926.9	30	0	703.64	0.033	+			12559	GEGKLFSL	8	43	425.73707186476656	849.4595907963331	2	425.7370300292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEGKLFSL_	ENSG00000132383|ENST00000254719|RPA1;RPA1|p.N274Mfs*5|1|0.18|ENSG00000132383|chr17:1879272-1879272|A/-|frameshift_variant	65.46538089061403	0.44767499471257033	6				NaN	NaN	0	NaN	12487	4032	16519
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16556	41.594	NaN	2482.9	30	0	309.32	0.143	+			37942	SPEGLKVFY	9	64	520.2767554377829	1038.5389579423656	2	520.2760620117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SPEGLKVFY_	ENSG00000083857|ENST00000441802|FAT1;FAT1|p.G2934Vfs*3|2|0.37|ENSG00000083857|chr4:186617787-186617787|T/-|frameshift_variant;FAT1|p.N3847Yfs*7|1|0.03|ENSG00000083857|chr4:186601370-186601371|-/TTATA|frameshift_variant;FAT1|p.P3228Lfs*42|1|0.27|ENSG00000083857|chr4:186611556-186611556|G/-|frameshift_variant;FAT1|p.P4313Lfs*36|1|0.34|ENSG00000083857|chr4:186596602-186596602|G/-|frameshift_variant;FAT1|p.Q2933Hfs*14|1|0.33|ENSG00000083857|chr4:186617787-186617788|-/G|frameshift_variant	110.11987700582712	0.028875675806141952	6				NaN	NaN	0	NaN	12516	4038	16555
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16574	41.632	NaN	5296.7	30	0	2764.8	0.214	+			11607	FPSSVTNTL	9	53	483.25072768044447	964.486902427689	2	483.2503662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FPSSVTNTL_	ENSG00000145113|ENST00000463781|MUC4;MUC4|p.L3985Ffs*274|1|0.3|ENSG00000145113|chr3:195779627-195779627|G/-|frameshift_variant;MUC4|p.N4902Tfs*8|1|0.37|ENSG00000145113|chr3:195761027-195761027|T/-|frameshift_variant;nc|ENSG00000145113|Q99102-10|MUC4;nc|ENSG00000145113|Q99102-11|MUC4;nc|ENSG00000145113|Q99102-15|MUC4;nc|ENSG00000145113|Q99102-16|MUC4;nc|ENSG00000145113|Q99102-17|MUC4;nc|ENSG00000145113|Q99102-2|MUC4;nc|ENSG00000145113|Q99102-3|MUC4;nc|ENSG00000145113|Q99102-5|MUC4;nc|ENSG00000145113|Q99102-7|MUC4;nc|ENSG00000145113|Q99102-8|MUC4;nc|ENSG00000145113|Q99102-9|MUC4	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	12531	4041	16573
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16575	41.636	NaN	2251.3	30	0	336.86	0.034	+			11555	FPKGEQEL	8	55	474.245400832728	946.4762487322561	2	474.2453308105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FPKGEQEL_	ENSG00000113555|ENST00000231484|PCDH12;PCDH12|p.L685Yfs*7|3|0.18|ENSG00000113555|chr5:141955800-141955800|G/-|frameshift_variant	51.33545320467046	0.5859736979383976	6				NaN	NaN	0	NaN	12532	4041	16573
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16592	41.675	NaN	2227.2	30	0	553.15	0.215	+			25355	LPFGKVTNL	9	60	494.79514694705887	987.5757409609178	2	494.79522705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LPFGKVTNL_	ENSG00000011304|ENST00000356948|PTBP1;ENSG00000119314|ENST00000374257|PTBP3;ENST00000586944.5_1_19:797434-805231:+|nuORF;ENST00000590887.5_1_19:797434-804304:+|nuORF;nc|ENSG00000011304|P26599-1|PTBP1;nc|ENSG00000011304|P26599-2|PTBP1;nc|ENSG00000119314|O95758-1|PTBP3;nc|ENSG00000119314|O95758-2|PTBP3;nc|ENSG00000119314|O95758-4|PTBP3;nc|ENSG00000119314|O95758-5|PTBP3;nc|ENSG00000119314|O95758|PTBP3	51.52775601994872	0.28504342437107444	6				NaN	NaN	0	NaN	12546	4044	16591
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16593	41.678	NaN	2399.4	30	0	334.78	0.035	+			660	AEAESMYQI	9	53	521.2317089417141	1040.4488649502282	2	521.2317504882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEAESMYQI_	CON__H-INV:HIT000292931;CON__P05787;CON__Q9H552;ENSG00000170421|ENST00000692008|KRT8;ENST00000409686.2_1_9:102067468-102068890:+|nuORF;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;ENST00000547031.5_1_12:53292389-53294972:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	77.31757898189308	0.1091473830098891	6				NaN	NaN	0	NaN	12547	4044	16591
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16609	41.712	NaN	3158.9	30	0	448.91	0.214	+			42130	SYLTSASSL	9	57	464.7349298423687	927.4553067515374	2	464.7345275878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SYLTSASSL_	ENSG00000104517|ENST00000520539|UBR5;nc|ENSG00000104517|O95071-2|UBR5;UBR5|p.E2121Kfs*28|1|0.39|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant;UBR5|p.E2121Rfs*13|1|0.28|ENSG00000104517|chr8:102277120-102277121|-/T|frameshift_variant;UBR5|p.F2571Lfs*4|2|0.31|ENSG00000104517|chr8:102262044-102262044|A/-|frameshift_variant;UBR5|p.K2120Rfs*13|1|0.24|ENSG00000104517|chr8:102277121-102277122|TT/-|frameshift_variant	84.9155231211612	0.07920012719736333	6				NaN	NaN	0	NaN	12560	4047	16608
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16610	41.715	NaN	1781.5	30	0	424.38	0.106	+			40397	STVEFLLSK	9	62	512.290030809097	NaN	0	512.2904052734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STVEFLLSK_	ENSG00000115183|ENST00000263635|TANC1;ENST00000470074.1_1_2:160055548-160076048:+|nuORF;nc|ENSG00000115183|Q9C0D5-2|TANC1;TANC1|p.L1158S|1|0.35|ENSG00000115183|chr2:159219332-159219332|T/C|missense_variant	54.722347961057174	0.17414871455573902	6				NaN	NaN	0	NaN	12561	4047	16608
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16611	41.717	NaN	798.72	30	0	77.854	0.034			+	23855	LDDRSSPF	8	45	468.7241516113281	NaN	0	468.7241516113281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LDDRSSPF_	REV__ENSG00000009413|ENST00000368802|REV3L;REV__nc|ENSG00000009413|O60673-2|REV3L;REV__REV3L|p.G2684Vfs*11|1|0.35|ENSG00000009413|chr6:111329724-111329724|T/-|frameshift_variant;REV__REV3L|p.I1992Lfs*2|1|0.29|ENSG00000009413|chr6:111367814-111367814|T/-|frameshift_variant;REV__REV3L|p.N1694Mfs*4|2|0.16|ENSG00000009413|chr6:111373274-111373274|T/-|frameshift_variant	40.5726180659479	1.7418937515398478	6				NaN	NaN	0	NaN	12562	4047	16608
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16635	41.773	NaN	1065.9	30	0	131.08	0.214	+			41774	SVSPFLLGR	9	37	488.28433501271803	NaN	0	488.2845153808594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSPFLLGR_	ENSG00000198700|ENST00000361565|IPO9	42.396135135203025	0.2590952873412954	6				NaN	NaN	0	NaN	12580	4053	16634
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16636	41.777	NaN	1748.9	30	0	232.69	0.036	+			27667	MPSSDTTVTF	10	60	543.2450898833773	NaN	0	543.2442016601562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MPSSDTTVTF_	ENSG00000095015|ENST00000399503|MAP3K1	47.657333605630114	0.3204131577145918	6				NaN	NaN	0	NaN	12581	4053	16634
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16654	41.814	NaN	11039	30	0	2010.1	0.214	+			27522	MPAAQEGAVAF	11	69	546.2631097206328	1090.5116665080654	2	546.2642211914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MPAAQEGAVAF_	ENSG00000231925|ENST00000434618|TAPBP;ENST00000480730.5_1_6:33272736-33281818:-|nuORF;nc|ENSG00000231925|O15533-2|TAPBP;nc|ENSG00000231925|O15533-3|TAPBP;nc|ENSG00000231925|O15533-4|TAPBP	72.87924865735499	0.21173632944124365	6				NaN	NaN	0	NaN	12596	4056	16653
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16655	41.818	NaN	2521.5	30	0	306.05	0.035	+			43968	TPEKVFVVM	9	64	525.2888250469415	1048.563097160683	2	525.2903442382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TPEKVFVVM_	ENSG00000105287|ENST00000291281|PRKD2;ENST00000597589.5_1_19:47177782-47200527:-|nuORF;ENST00000599019.5_1_19:47177782-47200527:-|nuORF;nc|ENSG00000105287|Q9BZL6-2|PRKD2;nc|ENSG00000105287|Q9BZL6-3|PRKD2;PRKD2|p.D633Tfs*5|1|0.38|ENSG00000105287|chr19:46689611-46689611|C/-|frameshift_variant	44.377184641726394	0.36891676396732553	6				NaN	NaN	0	NaN	12597	4056	16653
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16669	41.847	NaN	1225.9	30	0	156.15	0.144	+			28751	NPAIRVFEY	9	62	554.7927856445312	NaN	0	554.7927856445312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NPAIRVFEY_	ENSG00000130768|ENST00000373894|SMPDL3B;ENST00000548116.5_1_1:28271947-28285346:+|nuORF;nc|ENSG00000130768|Q92485-2|SMPDL3B	75.04331003522576	0.0883683072398826	6				NaN	NaN	0	NaN	12608	4059	16668
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16682	41.877	NaN	1489.5	30	0	158.33	0.143	+			11602	FPSLPGTPGF	10	58	510.26127518961147	NaN	0	510.2610778808594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FPSLPGTPGF_	ENST00000607166.1_1_10:31607359-31607734:-|nuORF	60.97194046774394	0.22634118066553113	6				NaN	NaN	0	NaN	12618	4062	16681
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16700	41.917	NaN	2223.6	30	0	469.24	0.144	+			40908	SVFQETLLH	9	65	537.2849007517142	1072.5552485702283	2	537.7870483398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVFQETLLH_	ENST00000602661.5_1_9:108363519-108366511:+|nuORF	95.81516180277367	0.04847050768394289	6				NaN	NaN	0	NaN	12633	4065	16699
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16710	41.941	NaN	2933.3	30	0	1200.6	0.144	+			21682	KQEHIADKL	9	54	541.3060905351964	NaN	0	541.3059692382812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KQEHIADKL_	BCL11A|p.C121S|1|0.32|ENSG00000119866|chr2:60545995-60545995|A/T|missense_variant;BCL11A|p.L265Cfs*15|1|0.34|ENSG00000119866|chr2:60462119-60462119|G/-|frameshift_variant;BCL11A|p.L360Sfs*61|3|0.26|ENSG00000119866|chr2:60461834-60461834|G/-|frameshift_variant;BCL11A|p.S554Vfs*18|1|0.05|ENSG00000119866|chr2:60461252-60461253|-/C|frameshift_variant;ENSG00000119866|ENST00000642384|BCL11A;nc|ENSG00000119866|Q9H165-2|BCL11A;nc|ENSG00000119866|Q9H165-3|BCL11A	52.936696900407355	0.1864545979552969	6				NaN	NaN	0	NaN	12640	4068	16709
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16727	41.978	NaN	3595.5	30	0	1716.4	0.214	+			11608	FPSSVTNTL	9	54	483.25072768044447	964.486902427689	2	483.2503967285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FPSSVTNTL_	ENSG00000145113|ENST00000463781|MUC4;MUC4|p.L3985Ffs*274|1|0.3|ENSG00000145113|chr3:195779627-195779627|G/-|frameshift_variant;MUC4|p.N4902Tfs*8|1|0.37|ENSG00000145113|chr3:195761027-195761027|T/-|frameshift_variant;nc|ENSG00000145113|Q99102-10|MUC4;nc|ENSG00000145113|Q99102-11|MUC4;nc|ENSG00000145113|Q99102-15|MUC4;nc|ENSG00000145113|Q99102-16|MUC4;nc|ENSG00000145113|Q99102-17|MUC4;nc|ENSG00000145113|Q99102-2|MUC4;nc|ENSG00000145113|Q99102-3|MUC4;nc|ENSG00000145113|Q99102-5|MUC4;nc|ENSG00000145113|Q99102-7|MUC4;nc|ENSG00000145113|Q99102-8|MUC4;nc|ENSG00000145113|Q99102-9|MUC4	60.11826168202944	0.21262886028301267	6				NaN	NaN	0	NaN	12654	4071	16726
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16728	41.981	NaN	1132.3	30	0	111.35	0.106			+	24930	LKSSWTEP	8	46	474.245400832728	946.4762487322561	2	474.2452697753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LKSSWTEP_	REV__ENSG00000162687|ENST00000294725|KCNT2;REV__ENST00000498426.5_1_1:196286396-196434478:-|nuORF;REV__ENST00000610076.1_1_1:196227273-196577439:-|nuORF;REV__nc|ENSG00000162687|Q6UVM3-2|KCNT2;REV__nc|ENSG00000162687|Q6UVM3-3|KCNT2;REV__nc|ENSG00000162687|Q6UVM3-4|KCNT2	51.33545320467046	0.5859736979383976	6				NaN	NaN	0	NaN	12655	4071	16726
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16729	41.984	NaN	4684.5	30	0	1919.8	0.036	+			32403	QVEEIFNLK	9	64	560.3061374253937	1118.5977219175873	2	560.306884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QVEEIFNLK_	ENSG00000263001|ENST00000573035|GTF2I;ENST00000544802.5_1_7:72593260-72619478:+|nuORF;nc|ENSG00000263001|P78347-2|GTF2I;nc|ENSG00000263001|P78347-3|GTF2I;nc|ENSG00000263001|P78347-4|GTF2I	77.53327743719008	0.1082147015697554	6				NaN	NaN	0	NaN	12656	4071	16726
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16747	42.022	NaN	2666	30	0	302.71	0.214	+			30580	QANYTIQSL	9	59	519.2666406257036	NaN	0	519.266357421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QANYTIQSL_	ENSG00000086065|ENST00000223500|CHMP5;nc|ENSG00000086065|Q9NZZ3-2|CHMP5	106.68306549817024	0.012692596758972883	6				NaN	NaN	0	NaN	12671	4074	16746
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16748	42.025	NaN	1804.6	30	0	206.04	0.036			+	22623	KTVARLFQF	9	58	555.3270141392965	1108.6394753453928	2	555.327392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTVARLFQF_	REV__ENSG00000173452|ENST00000405844|TMEM196;REV__nc|ENSG00000173452|Q5HYL7-2|TMEM196;REV__nc|ENSG00000173452|Q5HYL7-3|TMEM196;REV__nc|ENSG00000173452|Q5HYL7-4|TMEM196;REV__nc|ENSG00000173452|Q5HYL7|TMEM196	47.657333605630114	0.33044192980041115	6				NaN	NaN	0	NaN	12672	4074	16746
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16766	42.064	NaN	2473.9	30	0	639.89	0.143			+	-1	PHVFSKML	8	54	487.75838032933916	NaN	0	487.7588806152344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_PHVFSKM(Oxidation (M))L_	REV__ENSG00000124126|ENST00000371941|PREX1;REV__ENST00000482556.5_1_20:47242425-47249020:-|nuORF;REV__nc|ENSG00000124126|Q8TCU6-2|PREX1	54.76467175910256	1.7418937515398478	6				NaN	NaN	0	NaN	12687	4077	16765
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16779	42.094	NaN	1782.6	30	0	380.78	0.143	+			45156	TVLSSWIAK	9	57	502.79292248912515	NaN	0	502.7925720214844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVLSSWIAK_	CADPS2|p.D1011Nfs*3|1|0.04|ENSG00000081803|chr7:122388716-122388717|-/ATGTATT|frameshift_variant;CADPS2|p.I824*|1|0.21|ENSG00000081803|chr7:122438351-122438351|G/-|frameshift_variant;CADPS2|p.N1185Tfs*15|1|0.4|ENSG00000081803|chr7:122345632-122345632|T/-|frameshift_variant;ENSG00000081803|ENST00000449022|CADPS2;nc|ENSG00000081803|Q86UW7-2|CADPS2;nc|ENSG00000081803|Q86UW7-3|CADPS2	60.11826168202944	0.14881452885248947	6				NaN	NaN	0	NaN	12697	4080	16778
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16797	42.132	NaN	3862.2	30	0	576.54	0.143	+			35201	SAIVEIFSK	9	65	497.28548387068	992.5564148081601	2	497.28485107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAIVEIFSK_	ENSG00000050405|ENST00000341247|LIMA1;LIMA1|p.T536Lfs*38|2|0.4|ENSG00000050405|chr12:50177739-50177739|G/-|frameshift_variant;nc|ENSG00000050405|Q9UHB6-4|LIMA1	72.87924865735499	0.12833875048249987	6				NaN	NaN	0	NaN	12712	4083	16796
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16814	42.169	NaN	2721.3	30	0	281.32	0.144	+			27523	MPAAQEGAVAF	11	58	546.2631097206328	1090.5116665080654	2	546.2645874023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MPAAQEGAVAF_	ENSG00000231925|ENST00000434618|TAPBP;ENST00000480730.5_1_6:33272736-33281818:-|nuORF;nc|ENSG00000231925|O15533-2|TAPBP;nc|ENSG00000231925|O15533-3|TAPBP;nc|ENSG00000231925|O15533-4|TAPBP	56.43379154798735	0.3552884390983883	6				NaN	NaN	0	NaN	12726	4086	16813
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16832	42.208	NaN	3780.4	30	0	611.95	0.215			+	48450	VTLDAQVTY	9	58	505.2642252836685	1008.513897634137	2	505.26361083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTLDAQVTY_	REV__ENSG00000121988|ENST00000264159|ZRANB3;REV__ENST00000403017.2_1_2:135957914-136028945:-|nuORF;REV__nc|ENSG00000121988|Q5FWF4-2|ZRANB3;REV__nc|ENSG00000121988|Q5FWF4-3|ZRANB3;REV__nc|ENSG00000121988|Q5FWF4-4|ZRANB3;REV__ZRANB3|p.P883S|1|0.14|ENSG00000121988|chr2:135207796-135207796|G/A|missense_variant	96.19043198914106	0.047412499214244314	6				NaN	NaN	0	NaN	12741	4089	16831
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16833	42.212	NaN	1856	30	0	208.12	0.106	+			28296	NECGKVFIL	9	58	540.2828573713524	1078.5511618095047	2	540.28271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_NEC(Carbamidomethyl (C))GKVFIL_	ENSG00000186448|ENST00000344387|ZNF197	63.53385203322761	0.18415635464017938	6				NaN	NaN	0	NaN	12742	4089	16831
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16834	42.214	NaN	2402.4	30	0	419.25	0.106	+			28910	NQRGSGLAGP	10	65	478.747629539191	955.480706145182	2	478.7471618652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NQRGSGLAGP_	ENSG00000158195|ENST00000618852|WASF2	74.25504064058377	0.24255678544297835	6				NaN	NaN	0	NaN	12743	4089	16831
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16835	42.216	NaN	693.3	30	0	88.616	0.106			+	29869	PLGGPSPL	8	35	369.21206502929147	NaN	0	369.2120666503906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PLGGPSPL_	REV__ENST00000462793.5_1_19:36501484-36502343:-|nuORF;REV__ENST00000473572.2_1_19:36501753-36502343:-|nuORF;REV__ENST00000490483.5_3_19:36500194-36502343:-|nuORF;REV__ENST00000490986.5_3_19:36500194-36502343:-|nuORF	26.79610172149135	1.7418937515398478	6				NaN	NaN	0	NaN	12744	4089	16831
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16836	42.217	NaN	1948.6	30	0	282.36	0.106	+			25439	LPPGSVISY	9	48	466.75794151137677	NaN	0	466.7579650878906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LPPGSVISY_	ENSG00000182220|ENST00000636580|ATP6AP2;nc|ENSG00000182220|O75787-2|ATP6AP2	73.97473282117947	0.09202988758641674	6				NaN	NaN	0	NaN	12745	4089	16831
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16837	42.219	NaN	1704.5	30	0	202.49	0.034			+	26782	LVRRDSLL	8	59	486.302101543155	970.58965015311	2	486.30224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LVRRDSLL_	REV__ENSG00000182544|ENST00000329548|MFSD5;REV__nc|ENSG00000182544|Q6N075-2|MFSD5	51.33545320467046	0.5859736979383976	6				NaN	NaN	0	NaN	12746	4089	16831
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16889	42.333	NaN	4869.5	30	0	1338.4	0.214			+	47107	VLLSGVLVGI	10	61	485.32102901961713	968.6275051060343	2	485.3211364746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VLLSGVLVGI_	REV__ENSG00000007129|ENST00000401445|CEACAM21;REV__ENST00000482870.6_1_19:42071403-42092879:+|nuORF;REV__nc|ENSG00000007129|Q3KPI0-2|CEACAM21	53.351449002276354	0.42630798468005626	6				NaN	NaN	0	NaN	12789	4098	16888
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16890	42.337	NaN	3867.4	30	0	363.05	0.035	+			42289	TAEGTVFHF	9	66	504.7433383421026	1007.4721237510053	2	504.743408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAEGTVFHF_	ENSG00000141076|ENST00000314423|UTP4;nc|ENSG00000141076|Q969X6-2|UTP4;nc|ENSG00000141076|Q969X6-3|UTP4	76.84663266511073	0.11118375776443899	6				NaN	NaN	0	NaN	12790	4098	16888
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16907	42.371	NaN	785.72	30	0	113.06	0.141	+			50000	WAPESAPL	8	31	435.72170663556295	869.4288603379259	2	435.7217102050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WAPESAPL_	ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;nc|ENSG00000165410|Q9Y281-3|CFL2	46.76643321282427	0.6143254112625767	6				NaN	NaN	0	NaN	12804	4101	16906
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16923	42.406	NaN	5938.8	30	0	600.07	0.143	+			41107	SVINVFVGR	9	66	495.7903272718031	989.5661016104062	2	495.79010009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVINVFVGR_	ENSG00000135540|ENST00000343505|NHSL1;nc|ENSG00000135540|Q5SYE7|NHSL1;NHSL1|p.E1312Gfs*27|1|0.12|ENSG00000135540|chr6:138430422-138430423|-/C|frameshift_variant;NHSL1|p.I1199Ffs*26|1|0.44|ENSG00000135540|chr6:138430763-138430763|G/-|frameshift_variant;NHSL1|p.P932Rfs*70|1|0.13|ENSG00000135540|chr6:138431562-138431562|G/-|frameshift_variant	82.7504851949679	0.08565546331141553	6				NaN	NaN	0	NaN	12817	4104	16922
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16939	42.441	NaN	2455.3	30	0	231.35	0.214	+			7206	DAIRLAVSY	9	59	504.2795277781036	1006.5445026230072	2	504.27947998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DAIRLAVSY_	ENSG00000079974|ENST00000691320|RABL2B;ENSG00000144134|ENST00000683472|RABL2A;ENST00000436958.5_1_22:51207206-51220648:-|nuORF;ENST00000450954.5_1_2:114386257-114399703:+|nuORF;ENST00000465063.5_1_22:51207206-51208050:-|nuORF;ENST00000486403.1_1_2:114398907-114399703:+|nuORF;ENST00000494909.5_1_2:114398907-114399703:+|nuORF;nc|ENSG00000144134|Q9UBK7-3|RABL2A;nc|ENSG00000144134|Q9UBK7|RABL2A;nc|ENSG00000144134|Q9UNT1-3|RABL2B;nc|ENSG00000144134|Q9UNT1|RABL2B	53.08895987439943	0.27122541748218487	6				NaN	NaN	0	NaN	12830	4107	16938
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16940	42.444	NaN	5251.9	30	0	1765.7	0.036	+			30464	QADFSVLHY	9	65	540.2617404433005	1078.5089279534009	2	540.2626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QADFSVLHY_	ENSG00000105357|ENST00000642316|MYH14;MYH14|p.L1950Sfs*14|1|0.34|ENSG00000105357|chr19:50309646-50309646|C/-|frameshift_variant;MYH14|p.M997*|1|0.19|ENSG00000105357|chr19:50271483-50271483|A/-|frameshift_variant;MYH14|p.R929Gfs*44|1|0.38|ENSG00000105357|chr19:50268237-50268237|G/-|frameshift_variant;nc|ENSG00000105357|Q7Z406-4|MYH14;nc|ENSG00000105357|Q7Z406-5|MYH14;nc|ENSG00000105357|Q7Z406-6|MYH14;nc|ENSG00000105357|Q7Z406|MYH14	57.81127852772723	0.2318599694398087	6				NaN	NaN	0	NaN	12831	4107	16938
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16951	42.468	NaN	20113	30	0	9155.2	0.214	+			30598	QAQEVFFLK	9	79	555.3029214078879	1108.5912898825757	2	555.303466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QAQEVFFLK_	ENSG00000170248|ENST00000307296|PDCD6IP;ENST00000459659.1_1_3:33863478-33868168:+|nuORF;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP;nc|ENSG00000170248|Q8WUM4-3|PDCD6IP;PDCD6IP|p.F351Nfs*37|1|0.08|ENSG00000170248|chr3:33836259-33836260|-/AATCC|frameshift_variant	84.9155231211612	0.07920012719736333	6				NaN	NaN	0	NaN	12839	4110	16950
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16952	42.472	NaN	5325.9	30	0	1113.8	0.106	+			18290	IPNEIIHAL	9	64	510.2979579023041	1018.5813628714083	2	510.297607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IPNEIIHAL_	ENSG00000099783|ENST00000325495|HNRNPM;HNRNPM|p.M346Wfs*22|1|0.25|ENSG00000099783|chr19:8473699-8473699|A/-|frameshift_variant	93.1432384553994	0.056003526918089595	6				NaN	NaN	0	NaN	12840	4110	16950
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16953	42.474	NaN	2161.2	30	0	373.52	0.106	+			6788	CFNAKLKI	8	58	518.286215698296	1034.557878463392	2	518.2863159179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))C(Carbamidomethyl (C))FNAKLKI_	ENSG00000162849|ENST00000407071|KIF26B;KIF26B|p.E2022K|1|0.13|ENSG00000162849|chr1:245698923-245698923|G/A|missense_variant;nc|ENSG00000162849|Q2KJY2-2|KIF26B	55.50420428727701	0.5462892107279674	6				NaN	NaN	0	NaN	12841	4110	16950
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16954	42.476	NaN	2382.1	30	0	194.66	0.106	+			37997	SPLAARLLY	9	57	502.30011547510225	NaN	0	502.3002014160156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SPLAARLLY_	ENSG00000100300|ENST00000337554|TSPO	74.25504064058377	0.09106938647426577	6				NaN	NaN	0	NaN	12842	4110	16950
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16955	42.477	NaN	1152.2	30	0	220.4	0.034	+			25420	LPLQANVY	8	45	459.2578809011734	916.5012088691468	2	459.25775146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LPLQANVY_	ENSG00000112893|ENST00000261483|MAN2A1	42.47446043378293	0.6409579893742323	6				NaN	NaN	0	NaN	12843	4110	16950
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16985	42.543	NaN	1671.9	30	0	182.29	0.215	+			27546	MPDLAHVM	8	49	457.2173375696416	912.4201222060832	2	457.2167053222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MPDLAHVM_	ENSG00000138032|ENST00000282412|PPM1B;ENST00000488866.1_1_2:44445059-44445709:+|nuORF;nc|ENSG00000138032|O75688-2|PPM1B;nc|ENSG00000138032|O75688-3|PPM1B;nc|ENSG00000138032|O75688-4|PPM1B;PPM1B|p.N346Ifs*25|1|0.12|ENSG00000138032|chr2:44218036-44218036|A/-|frameshift_variant	71.37791200682192	0.3954169775488141	6				NaN	NaN	0	NaN	12867	4116	16984
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16986	42.546	NaN	771.24	30	0	57.906	0.106			+	29722	PHLVSEQVPK	10	46	567.3210372591875	NaN	0	567.321044921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PHLVSEQVPK_	REV__ENST00000470664.1_1_2:202013700-202014764:+|nuORF	27.882242232435846	0.4086243523356342	6				NaN	NaN	0	NaN	12868	4116	16984
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16987	42.548	NaN	1173.9	30	0	128.51	0.037	+			25529	LPTEPPYTAY	10	40	576.2854585612672	1150.5563641893343	2	576.2841186523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LPTEPPYTAY_	ENSG00000106682|ENST00000265753|EIF4H;ENST00000479338.5_1_7:73588713-73604094:+|nuORF;ENST00000489484.5_1_7:73588713-73604262:+|nuORF;nc|ENSG00000106682|Q15056-2|EIF4H	40.77816245573522	0.5419747034533848	6				NaN	NaN	0	NaN	12869	4116	16984
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17002	42.58	NaN	652.35	30	0	62.588	0.139	+			30198	PSPPLLGG	8	35	369.2119786744008	736.4094044156017	2	369.2120666503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PSPPLLGG_	ENSG00000120457|ENST00000529694|KCNJ5	15.63621529709179	0.7929342111279789	6				NaN	NaN	0	NaN	12881	4119	17001
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17020	42.618	NaN	3886.9	30	0	854.44	0.214	+			18470	ISFGAFVAK	9	56	470.26852444827	NaN	0	470.2682189941406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ISFGAFVAK_	ENSG00000143384|ENST00000369026|MCL1	113.41158876095287	0.006616183131571386	6				NaN	NaN	0	NaN	12896	4122	17019
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17021	42.622	NaN	2074.6	30	0	406.2	0.106	+			24046	LEGLPLIK	8	52	441.7866901535319	881.5588273738638	2	442.2879333496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LEGLPLIK_	ENSG00000119929|ENST00000370476|CUTC	90.77665401227738	0.27511901818546464	6				NaN	NaN	0	NaN	12897	4122	17019
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17022	42.624	NaN	2825.1	30	0	265.3	0.035	+			27615	MPNVKVAVF	9	69	502.7839213875574	1003.5532898419149	2	502.7832336425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MPNVKVAVF_	DDX39B|p.F149Lfs*13|4|0.27|ENSG00000198563|chr6:31536669-31536669|A/-|frameshift_variant;ENSG00000198563|ENST00000396172|DDX39B;ENST00000481456.1_1_6:31503008-31508408:-|nuORF;nc|ENSG00000198563|Q13838-2|DDX39B	90.36981228632155	0.0638227155548745	6				NaN	NaN	0	NaN	12898	4122	17019
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17055	42.695	NaN	9515.6	30	0	1187.1	0.214	+			28777	NPEIEKKY	8	78	510.7721054383731	1019.5296579435462	2	510.7725524902344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NPEIEKKY_	ENSG00000100483|ENST00000395860|VCPKMT;nc|ENSG00000100483|Q9H867-2|VCPKMT;nc|ENSG00000100483|Q9H867-5|VCPKMT;VCPKMT|p.K180E|1|0.05|ENSG00000100483|chr14:50114317-50114317|T/C|missense_variant	85.16082228582465	0.29211966821764696	6				NaN	NaN	0	NaN	12925	4128	17054
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17056	42.699	NaN	2673.2	30	0	367.13	0.106	+			1893	AIMENANVL	9	57	487.75262729131066	NaN	0	487.7527770996094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AIMENANVL_	ENSG00000149925|ENST00000642816|ALDOA;ENST00000566146.1_1_16:30080209-30080764:+|nuORF;nc|ENSG00000149925|P04075|ALDOA	75.04331003522576	0.0883683072398826	6				NaN	NaN	0	NaN	12926	4128	17054
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17057	42.701	NaN	1737.8	30	0	130.13	0.106	+			48175	VTACLIAVAK	10	52	494.79556656648873	987.5765801997775	2	494.79608154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTACLIAVAK_	ENSG00000103047|ENST00000261778|TANGO6;ENST00000561931.1_1_16:69060550-69117561:+|nuORF	39.252832667884924	0.5560298534376815	6				NaN	NaN	0	NaN	12927	4128	17054
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17058	42.703	NaN	1758.5	30	0	344.97	0.034	+			24039	LEFTAHVL	8	53	465.2577030522557	NaN	0	465.2578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LEFTAHVL_	ENSG00000102837|ENST00000219022|OLFM4	76.84663266511073	1.7418937515398478	6				NaN	NaN	0	NaN	12928	4128	17054
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17073	42.734	NaN	1598.1	30	0	245.4	0.144	+			30154	PSDITIYHL	9	53	529.7802244275658	1057.5458959219316	2	529.7802124023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PSDITIYHL_	ENSG00000104133|ENST00000261866|SPG11;nc|ENSG00000104133|Q96JI7-2|SPG11;nc|ENSG00000104133|Q96JI7-3|SPG11	94.00642277110589	0.05356993013874309	6				NaN	NaN	0	NaN	12940	4131	17072
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17091	42.773	NaN	1251	30	0	202.47	0.214	+			2803	ARTMMKVM	8	48	484.2495241080276	NaN	0	484.249755859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ARTMMKVM_	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42|TTN;TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant	60.97194046774394	1.7418937515398478	6				NaN	NaN	0	NaN	12955	4134	17090
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17092	42.776	NaN	1283.1	30	0	261.16	0.034	+			25440	LPPGSVISY	9	47	466.75794151137677	NaN	0	466.7582092285156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LPPGSVISY_	ENSG00000182220|ENST00000636580|ATP6AP2;nc|ENSG00000182220|O75787-2|ATP6AP2	55.50420428727701	0.16876052142120426	6				NaN	NaN	0	NaN	12956	4134	17090
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17120	42.838	NaN	1684.4	30	0	330.07	0.143			+	30179	PSIEGKLTY	9	51	504.27468147326886	1006.5348100133377	2	504.2741394042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PSIEGKLTY_	REV__ENSG00000065923|ENST00000616978|SLC9A7;REV__nc|ENSG00000065923|Q96T83|SLC9A7;REV__SLC9A7|p.E152K|1|0.66|ENSG00000065923|chrX:46682407-46682407|C/T|missense_variant;REV__SLC9A7|p.F255Lfs*11|1|0.37|ENSG00000065923|chrX:46669635-46669635|A/-|frameshift_variant;REV__SLC9A7|p.N185Qfs*62|1|0.35|ENSG00000065923|chrX:46679729-46679730|-/A|frameshift_variant	71.87747018426188	0.13267044672804276	6				NaN	NaN	0	NaN	12978	4140	17119
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17133	42.867	NaN	867.51	30	0	66.161	0.142			+	13587	GLVGVTMCV	9	52	476.2357559083045	NaN	0	476.2364196777344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_GLVGVTM(Oxidation (M))C(Carbamidomethyl (C))V_	REV__ENST00000430767.8_1_17:75211123-75211297:+|nuORF	60.29395666154354	0.1480651883005104	6				NaN	NaN	0	NaN	12988	4143	17132
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17145	42.895	NaN	3682.3	30	0	685.63	0.145	+			25530	LPTEPPYTAY	10	57	576.2854585612672	1150.5563641893343	2	576.2848510742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LPTEPPYTAY_	ENSG00000106682|ENST00000265753|EIF4H;ENST00000479338.5_1_7:73588713-73604094:+|nuORF;ENST00000489484.5_1_7:73588713-73604262:+|nuORF;nc|ENSG00000106682|Q15056-2|EIF4H	99.37495909608758	0.07955302164878343	6				NaN	NaN	0	NaN	12997	4146	17144
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17159	42.926	NaN	3014.9	30	0	891.53	0.214			+	25584	LQGNTSFAVY	10	56	550.2751525897669	1098.5357522463337	2	550.275634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LQGNTSFAVY_	REV__ENST00000540447.5_1_12:10856597-10862620:-|nuORF	78.26377905018397	0.20980573808910843	6				NaN	NaN	0	NaN	13008	4149	17158
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17160	42.929	NaN	2995.3	30	0	398.05	0.106			+	24448	LGELKSTL	8	46	430.7579650878906	NaN	0	430.7579650878906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LGELKSTL_	REV__ENST00000290524.8_2_1:151316737-151317222:-|nuORF	64.20726635412375	1.7418937515398478	6				NaN	NaN	0	NaN	13009	4149	17158
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17161	42.931	NaN	795.02	30	0	152.66	0.035	+			47722	VSFSAVVFK	9	39	492.2816014339635	NaN	0	492.2818298339844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSFSAVVFK_	ENSG00000101311|ENST00000217289|FERMT1;ENST00000536936.1_1_20:6088276-6096632:-|nuORF;nc|ENSG00000101311|Q9BQL6-2|FERMT1;nc|ENSG00000101311|Q9BQL6-4|FERMT1	32.81241826257853	0.3119040447479903	6				NaN	NaN	0	NaN	13010	4149	17158
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17183	42.982	NaN	2107.9	30	0	352.25	0.141	+			17393	IAPNGALQL	9	44	448.76376335951306	895.5129737858261	2	448.76336669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IAPNGALQL_	ATF1|p.T261Lfs*2|1|0.16|ENSG00000123268|chr12:50819740-50819740|A/-|frameshift_variant;ENSG00000123268|ENST00000262053|ATF1	60.97194046774394	0.20551255781574032	6				NaN	NaN	0	NaN	13026	4155	17182
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17201	43.021	NaN	10983	30	0	2577.9	0.214	+			11639	FQGASNLTL	9	63	475.75087430257366	949.4871956719473	2	475.7511291503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FQGASNLTL_	DDX18|p.K110Efs*11|1|0.42|ENSG00000088205|chr2:117817678-117817679|-/A|frameshift_variant;ENSG00000088205|ENST00000263239|DDX18	123.20810148215591	0.019257656778428764	6				NaN	NaN	0	NaN	13041	4158	17200
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17202	43.024	NaN	3011	30	0	746.2	0.034			+	30083	PQQCVESAL	9	44	487.7328475620862	973.4511421909724	2	487.7332458496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PQQCVESAL_	REV__ENSG00000184507|ENST00000537011|NUTM1;REV__nc|ENSG00000184507|Q86Y26-3|NUTM1;REV__nc|ENSG00000184507|Q86Y26|NUTM1;REV__NUTM1|p.G519Afs*26|2|0.3|ENSG00000184507|chr15:34355644-34355644|G/-|frameshift_variant;REV__NUTM1|p.K444Nfs*8|1|0.34|ENSG00000184507|chr15:34355070-34355070|A/-|frameshift_variant;REV__NUTM1|p.M697Wfs*28|1|0.12|ENSG00000184507|chr15:34356176-34356176|C/-|frameshift_variant;REV__NUTM1|p.Q931Kfs*53|1|0.37|ENSG00000184507|chr15:34356879-34356879|C/-|frameshift_variant	37.15910966729921	0.4535818937225704	6				NaN	NaN	0	NaN	13042	4158	17200
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17220	43.062	NaN	15885	30	0	4944.8	0.214	+			2322	AMLDTVVFK	9	69	512.2808215104342	1022.5470900876684	2	512.2807006835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AMLDTVVFK_	ENSG00000115233|ENST00000409682|PSMD14;ENST00000477232.5_1_2:162241962-162267908:+|nuORF;ENST00000492908.1_1_2:162265323-162267908:+|nuORF	148.98678547993487	0.0071052929883181565	6				NaN	NaN	0	NaN	13057	4161	17219
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17221	43.065	NaN	3102.6	30	0	550.33	0.106			+	25663	LRAVESNSG	9	65	466.7446022115506	931.4746514899012	2	466.7451477050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LRAVESNSG_	REV__ENSG00000178802|ENST00000352410|MPI;REV__ENST00000568303.1_1_15:75182833-75183082:+|nuORF;REV__ENST00000568840.1_1_15:75182430-75185220:+|nuORF;REV__MPI|p.V342Cfs*17|1|0.22|ENSG00000178802|chr15:74897182-74897183|-/C|frameshift_variant;REV__nc|ENSG00000178802|P34949-2|MPI	35.61828744233558	0.47037581924408073	6				NaN	NaN	0	NaN	13058	4161	17219
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17222	43.067	NaN	2350.4	30	0	222.8	0.106	+			45595	TYPAELNNI	9	62	517.7616977494008	1033.5088425656015	2	517.7612915039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TYPAELNNI_	ENSG00000106546|ENST00000242057|AHR	112.41091882917199	0.026537921851008135	6				NaN	NaN	0	NaN	13059	4161	17219
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17223	43.069	NaN	1008.3	30	0	165.31	0.106			+	-1	IIGSVMGSCP	10	41	503.2395672038914	NaN	0	503.2399597167969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))IIGSVMGSCP_	REV__APC|p.A1446Vfs*27|1|0.38|ENSG00000134982|chr5:112839931-112839931|C/-|frameshift_variant;REV__APC|p.A1492Cfs*22|2|0.29|ENSG00000134982|chr5:112840063-112840064|-/T|frameshift_variant;REV__APC|p.A1492Pfs*15|1|0.69|ENSG00000134982|chr5:112840068-112840068|G/-|frameshift_variant;REV__APC|p.C1578Mfs*13|1|0.68|ENSG00000134982|chr5:112840323-112840324|-/A|frameshift_variant;REV__APC|p.D1486Ifs*21|2|0.76|ENSG00000134982|chr5:112840049-112840049|T/-|frameshift_variant;REV__APC|p.E1464Vfs*8|2|0.27|ENSG00000134982|chr5:112839979-112839982|AGAG/-|frameshift_variant;REV__APC|p.E1494Kfs*13|1|0.84|ENSG00000134982|chr5:112840073-112840073|G/-|frameshift_variant;REV__APC|p.E1544Nfs*21|1|0.05|ENSG00000134982|chr5:112840220-112840220|T/-|frameshift_variant;REV__APC|p.E1552Qfs*12|1|0.31|ENSG00000134982|chr5:112840247-112840250|AGAG/-|frameshift_variant;REV__APC|p.E1576Kfs*74|1|0.61|ENSG00000134982|chr5:112840319-112840319|A/-|frameshift_variant;REV__APC|p.F1491Lfs*16|1|0.27|ENSG00000134982|chr5:112840064-112840064|T/-|frameshift_variant;REV__APC|p.H1490Nfs*25|1|0.21|ENSG00000134982|chr5:112840059-112840060|-/TAAA|frameshift_variant;REV__APC|p.H1490Tfs*24|1|0.23|ENSG00000134982|chr5:112840060-112840061|-/A|frameshift_variant;REV__APC|p.H1490Yfs*18|1|0.48|ENSG00000134982|chr5:112840059-112840060|-/TA|frameshift_variant;REV__APC|p.I1557*|1|0.43|ENSG00000134982|chr5:112840262-112840263|TA/-|frameshift_variant;REV__APC|p.I1574Yfs*2|1|0.36|ENSG00000134982|chr5:112840312-112840312|A/-|frameshift_variant;REV__APC|p.I1580Lfs*69|1|0.59|ENSG00000134982|chr5:112840330-112840333|TTAT/-|frameshift_variant;REV__APC|p.I1580Nfs*11|1|0.36|ENSG00000134982|chr5:112840331-112840332|-/A|frameshift_variant;REV__APC|p.K1454Lfs*20|1|0.81|ENSG00000134982|chr5:112839952-112839953|-/TT|frameshift_variant;REV__APC|p.L1488Ffs*17|1|0.27|ENSG00000134982|chr5:112840057-112840063|TATTACA/-|frameshift_variant;REV__APC|p.L1488Yfs*19|2|0.41|ENSG00000134982|chr5:112840055-112840055|T/-|frameshift_variant;REV__APC|p.L1489Kfs*19|1|0.34|ENSG00000134982|chr5:112840058-112840074|ATTACATTTTGCCACGG/-|frameshift_variant;REV__APC|p.L1489Yfs*18|3|0.26|ENSG00000134982|chr5:112840059-112840059|T/-|frameshift_variant;REV__APC|p.M1431Cfs*42|1|0.4|ENSG00000134982|chr5:112839883-112839883|C/-|frameshift_variant;REV__APC|p.N1455Ifs*18|1|0.15|ENSG00000134982|chr5:112839954-112839954|A/-|frameshift_variant;REV__APC|p.N1531Rfs*31|1|0.18|ENSG00000134982|chr5:112840186-112840195|ATGACAATGG/-|frameshift_variant;REV__APC|p.N1535Mfs*30|1|0.28|ENSG00000134982|chr5:112840194-112840194|G/-|frameshift_variant;REV__APC|p.P1439Lfs*34|4|0.34|ENSG00000134982|chr5:112839909-112839909|C/-|frameshift_variant;REV__APC|p.P1442Lfs*31|1|0.41|ENSG00000134982|chr5:112839918-112839918|C/-|frameshift_variant;REV__APC|p.P1453Lfs*20|2|0.29|ENSG00000134982|chr5:112839951-112839951|C/-|frameshift_variant;REV__APC|p.Q1429Dfs*45|1|0.42|ENSG00000134982|chr5:112839875-112839876|-/GG|frameshift_variant;REV__APC|p.Q1447Sfs*24|1|0.77|ENSG00000134982|chr5:112839931-112839937|CTCAAAC/-|frameshift_variant;REV__APC|p.R1435Efs*38|1|0.41|ENSG00000134982|chr5:112839897-112839897|A/-|frameshift_variant;REV__APC|p.R1435Lfs*31|1|0.38|ENSG00000134982|chr5:112839896-112839917|CAGAAGTAAAACACCTCCACCA/-|frameshift_variant;REV__APC|p.S1419*|1|0.33|ENSG00000134982|chr5:112839844-112839845|-/TA|frameshift_variant;REV__APC|p.S1421Mfs*52|1|0.67|ENSG00000134982|chr5:112839856-112839856|G/-|frameshift_variant;REV__APC|p.S1421Vfs*52|1|0.51|ENSG00000134982|chr5:112839855-112839855|A/-|frameshift_variant;REV__APC|p.S1436Rfs*38|1|0.42|ENSG00000134982|chr5:112839899-112839900|-/AG|frameshift_variant;REV__APC|p.S1436Vfs*37|1|0.37|ENSG00000134982|chr5:112839899-112839899|A/-|frameshift_variant;REV__APC|p.S1465Rfs*9|3|0.3|ENSG00000134982|chr5:112839978-112839979|-/AG|frameshift_variant;REV__APC|p.S1501Ffs*13|1|0.5|ENSG00000134982|chr5:112840091-112840092|-/T|frameshift_variant;REV__APC|p.S1581Lfs*69|1|0.34|ENSG00000134982|chr5:112840333-112840333|T/-|frameshift_variant;REV__APC|p.T1487Yfs*18|1|0.1|ENSG00000134982|chr5:112840051-112840057|ATACTTT/-|frameshift_variant;REV__APC|p.T1493Rfs*14|2|0.34|ENSG00000134982|chr5:112840069-112840069|C/-|frameshift_variant;REV__APC|p.T1496Kfs*19|1|0.17|ENSG00000134982|chr5:112840075-112840076|-/AAGT|frameshift_variant;REV__APC|p.T1556Lfs*9|1|0.61|ENSG00000134982|chr5:112840255-112840255|A/-|frameshift_variant;REV__APC|p.T1556Nfs*3|11|0.46|ENSG00000134982|chr5:112840254-112840255|-/A|frameshift_variant;REV__ENSG00000134982|ENST00000257430|APC;REV__nc|ENSG00000134982|P25054-2|APC;REV__nc|ENSG00000134982|P25054-3|APC	44.116797842482775	0.3427969396372342	6				NaN	NaN	0	NaN	13060	4161	17219
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17224	43.071	NaN	2657.5	30	0	490.26	0.106			+	27360	MISKLIGAPA	10	55	500.7953485567437	999.5761441802874	2	500.7947082519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MISKLIGAPA_	REV__ENSG00000186994|ENST00000330915|KANK3;REV__ENST00000593331.1_1_19:8399202-8399642:-|nuORF;REV__nc|ENSG00000186994|Q6NY19-1|KANK3	32.81241826257853	0.6118718159329168	6				NaN	NaN	0	NaN	13061	4161	17219
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17225	43.073	NaN	2199.9	30	0	368.63	0.035	+			25413	LPLEPCRVL	9	61	520.3022194112341	1038.589885889268	2	520.3026733398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LPLEPCRVL_	ENST00000262428.4_1_16:84600198-84600339:-|nuORF	56.72105179125745	0.24094814563026265	6				NaN	NaN	0	NaN	13062	4161	17219
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17241	43.105	NaN	2970.7	30	0	1095.5	0.214			+	7356	DDANLSFTI	9	55	498.2377409393488	994.4609289454976	2	498.2372741699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DDANLSFTI_	REV__ENSG00000105063|ENST00000412770|PPP6R1;REV__ENST00000586690.1_1_19:55748009-55750864:-|nuORF	44.377184641726394	0.36891676396732553	6				NaN	NaN	0	NaN	13075	4164	17240
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17242	43.109	NaN	1372.7	30	0	291.9	0.036	+			31388	QKILNILTN	9	53	528.8261872950828	1055.6378216569656	2	528.826416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QKILNILTN_	ENSG00000172915|ENST00000379939|NBEA;NBEA|p.V2250Lfs*10|1|0.36|ENSG00000172915|chr13:35550967-35550967|A/-|frameshift_variant;nc|ENSG00000172915|Q8NFP9|NBEA	58.78195531508484	0.22376836668196862	6				NaN	NaN	0	NaN	13076	4164	17240
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17259	43.144	NaN	6198	30	0	1057.8	0.214	+			42459	TAMDVVYALK	10	61	555.79705124178	1109.5795495503598	2	555.7972412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAMDVVYALK_	ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2	112.10723106719422	0.0417416748461292	6				NaN	NaN	0	NaN	13090	4167	17258
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17260	43.147	NaN	2084.6	30	0	702.74	0.106	+			36878	SIGGIIILK	9	50	457.307662507547	912.600772081894	2	457.30755615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SIGGIIILK_	ENSG00000173692|ENST00000308696|PSMD1;ENST00000491229.1_1_2:232035243-232035423:+|nuORF;nc|ENSG00000173692|Q99460-2|PSMD1	66.42927471994793	0.16001998865088202	6				NaN	NaN	0	NaN	13091	4167	17258
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17261	43.149	NaN	1573.1	30	0	436.13	0.037			+	39198	STAALLFASSY	11	43	565.7894021923452	1129.5642514514902	2	565.7897338867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STAALLFASSY_	REV__ENSG00000170881|ENST00000303545|RNF139;REV__RNF139|p.R559Lfs*60|1|0.18|ENSG00000170881|chr8:124487325-124487325|G/-|frameshift_variant	31.529811441608018	0.6590691889962369	6				NaN	NaN	0	NaN	13092	4167	17258
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17274	43.177	NaN	803.26	30	0	108.01	0.152	+			51307	YSFFMPAAK	9	47	531.2613898146194	NaN	0	531.2611083984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YSFFMPAAK_	ENSG00000130985|ENST00000335972|UBA1;nc|ENSG00000130985|P22314-2|UBA1	37.15910966729921	0.2899585034171616	6				NaN	NaN	0	NaN	13102	4170	17273
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17317	43.283	NaN	2873.1	30	0	418.62	0.143	+			50825	YESKVFYL	8	60	524.7724012720977	1047.5302496109953	2	524.7724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YESKVFYL_	ENSG00000128245|ENST00000248975|YWHAH;ENSG00000170027|ENST00000307630|YWHAG;ENST00000397492.1_1_22:32346295-32352776:+|nuORF	49.44154591367651	0.597725784090933	6				NaN	NaN	0	NaN	13133	4182	17316
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17335	43.328	NaN	2705	30	0	414.72	0.143	+			1889	AIMDPLPLR	9	58	513.2945638792278	1024.5745748252555	2	513.2950439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AIMDPLPLR_	AHR|p.D549Vfs*28|1|0.18|ENSG00000106546|chr7:17339471-17339474|ATTT/-|frameshift_variant;AHR|p.F562Sfs*16|1|0.24|ENSG00000106546|chr7:17339506-17339506|T/-|frameshift_variant;ENSG00000106546|ENST00000242057|AHR	49.44154591367651	0.3095138337212152	6				NaN	NaN	0	NaN	13145	4188	17334
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17347	43.356	NaN	11046	30	0	2351.3	0.214	+			10684	EYTAKIALL	9	64	511.30043898203616	1020.5863250308723	2	511.3009948730469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EYTAKIALL_	ENSG00000092820|ENST00000367075|EZR	129.68262048586715	0.015338143639892752	6				NaN	NaN	0	NaN	13154	4191	17346
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17348	43.359	NaN	1501.1	30	0	168.82	0.034	+			25393	LPIGATVNM	9	50	458.25224601540566	914.4899390976113	2	458.25225830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LPIGATVNM_	ENSG00000105281|ENST00000542575|SLC1A5;ENSG00000115902|ENST00000234256|SLC1A4;nc|ENSG00000105281|Q15758-2|SLC1A5;nc|ENSG00000105281|Q15758-3|SLC1A5;nc|ENSG00000115902|P43007-2|SLC1A4	44.116797842482775	0.37197099687881774	6				NaN	NaN	0	NaN	13155	4191	17346
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17358	43.383	NaN	1659.6	30	0	223.35	0.214	+			28446	NEYKGWVL	8	52	504.76146652187816	1007.5083801105563	2	504.76092529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NEYKGWVL_	ENSG00000152147|ENST00000281950|GEMIN6	66.42927471994793	0.4381325844043345	6				NaN	NaN	0	NaN	13162	4194	17357
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17359	43.387	NaN	1708.9	30	0	385.95	0.035	+			9363	EITTALELL	9	51	501.7912955764746	1001.5680382197493	2	501.7901611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EITTALELL_	ENST00000429927.6_2_4:76555328-76555460:-|nuORF	31.529811441608018	0.5085848003137583	6				NaN	NaN	0	NaN	13163	4194	17357
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17383	43.442	NaN	2880.8	30	0	430.11	0.215	+			7340	DAVVSQVL	8	48	415.7348448956671	829.4551368581342	2	415.73541259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DAVVSQVL_	ENSG00000130724|ENST00000312547|CHMP2A	71.87747018426188	0.391254423828572	6				NaN	NaN	0	NaN	13181	4200	17382
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17384	43.445	NaN	1370.4	30	0	88.405	0.032				-1	 	0	48	391.22547470307455	780.4363964729491	2	391.2251892089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13182	4200	17382
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17394	43.467	NaN	1890.7	30	0	201.01	0.14				-1	 	0	58	413.23842876779224	824.4623046023845	2	413.23809814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13189	4203	17393
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17429	43.551	NaN	14503	30	0	2721	0.144	+			256	AAMLDTVVFK	10	67	547.7995165704131	1093.584480207626	2	547.80078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAMLDTVVFK_	ENSG00000115233|ENST00000409682|PSMD14;ENST00000477232.5_1_2:162241962-162267908:+|nuORF;ENST00000492908.1_1_2:162265323-162267908:+|nuORF	126.24258497203832	0.01851300475414303	6				NaN	NaN	0	NaN	13215	4212	17428
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17447	43.589	NaN	4885.1	30	0	2183.8	0.214	+			32591	QYESKVFYL	9	61	588.8008029557284	1175.5870529782567	2	588.8005981445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QYESKVFYL_	ENSG00000128245|ENST00000248975|YWHAH;ENSG00000170027|ENST00000307630|YWHAG;ENST00000397492.1_1_22:32346295-32352776:+|nuORF	82.24051045832904	0.08786059719216216	6				NaN	NaN	0	NaN	13230	4215	17446
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17448	43.593	NaN	3167.2	30	0	321.11	0.036	+			32606	QYLTSVQQL	9	59	540.290487325717	1078.5664217182339	2	540.2899780273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QYLTSVQQL_	ENSG00000182504|ENST00000341893|CEP97;nc|ENSG00000182504|Q8IW35-2|CEP97	129.42129120953632	0.01549634589885217	6				NaN	NaN	0	NaN	13231	4215	17446
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17463	43.624	NaN	2161.3	30	0	926.1	0.144	+			32431	QVIDGFFVK	9	53	526.7923811321565	1051.570209331113	2	526.7919311523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QVIDGFFVK_	ENSG00000172732|ENST00000308110|MUS81;ENST00000530928.5_1_11:65631499-65632379:+|nuORF	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	13243	4218	17462
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17514	43.737	NaN	4403	30	0	789.39	0.214				-1	IVMKQEVLI	9	59	544.8222026649802	1087.6298523967603	2	544.8222045898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_IVM(Oxidation (M))KQEVLI_	RTTN|p.F276Sfs*69|2|0.11|ENSG00000176225|chr18:70196515-70196515|A/-|frameshift_variant	55.50420428727701	0.2510918378945873	6				NaN	NaN	0	NaN	13285	4227	17513
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17515	43.741	NaN	1456.1	30	0	221.78	0.037	+			47901	VSLLQNPPTVG	11	49	562.8213816626952	1123.6282103921903	2	562.8214721679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSLLQNPPTVG_	ENSG00000019102|ENST00000326621|VSIG2;nc|ENSG00000019102|Q96IQ7-2|VSIG2	40.05817265558897	0.5571470695993369	6				NaN	NaN	0	NaN	13286	4227	17513
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17526	43.764	NaN	1663.3	30	0	156.75	0.142	+			46688	VGIDIFTGK	9	52	475.2718871847959	948.5292214363918	2	475.2710266113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VGIDIFTGK_	EIF5AL1|p.K68T|1|0.33|ENSG00000253626|chr10:79512852-79512852|A/C|missense_variant;EIF5AL1|p.L114Sfs*3|1|0.07|ENSG00000253626|chr10:79512986-79512987|-/G|frameshift_variant;ENSG00000132507|ENST00000336458|EIF5A;ENSG00000163577|ENST00000295822|EIF5A2;ENSG00000253626|ENST00000520547|EIF5AL1;nc|ENSG00000132507|P63241-2|EIF5A	56.43379154798735	0.2433427591689151	6				NaN	NaN	0	NaN	13294	4230	17525
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17542	43.799	NaN	1633.2	30	0	217.29	0.214	+			9198	EGRCRVTL	8	47	467.2486883101125	932.4828236870251	2	467.2483825683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EGRCRVTL_	ENSG00000205730|ENST00000381440|ITPRIPL2;ENST00000566735.1_1_16:19125342-19127388:+|nuORF	69.6276240434122	0.4100012001731381	6				NaN	NaN	0	NaN	13307	4233	17541
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17543	43.803	NaN	1830.3	30	0	142.76	0.032				-1	 	0	59	391.22547470307455	780.4363964729491	2	391.22528076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13308	4233	17541
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17559	43.836	NaN	1158.8	30	0	56.077	0.14				-1	LARGPRGG	8	50	413.23842876779224	824.4623046023845	2	413.23797607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LARGPRGG_	ENST00000356447.8_1_3:24270456-24536172:-|nuORF;REV__ENST00000598244.5_1_19:58962997-58963642:+|nuORF	21.70233525837049	0.7917639344264583	6				NaN	NaN	0	NaN	13321	4236	17558
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17575	43.87	NaN	758.38	30	0	131.78	0.144			+	10155	ESSSLVGMVY	10	49	536.2548217773438	NaN	0	536.2548217773438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ESSSLVGMVY_	REV__nc|ENSG00000226807|Q6ZUA9|MROH5	42.396135135203025	0.3536752194735987	6				NaN	NaN	0	NaN	13334	4239	17574
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17589	43.901	NaN	2148.8	30	0	381.51	0.143	+			27111	MAPARLFAL	9	45	503.28148916789496	1004.5484254025899	2	503.28106689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))APARLFAL_	ENSG00000124145|ENST00000372733|SDC4;nc|ENSG00000124145|P31431-2|SDC4	55.50420428727701	0.2510918378945873	6				NaN	NaN	0	NaN	13345	4242	17588
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17598	43.923	NaN	5622.6	30	0	555.28	0.214	+			28035	NAAKIFNLY	9	73	527.2906154535796	1052.566677973959	2	527.2918090820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAAKIFNLY_	DPYSL3|p.A516Qfs*15|1|0.31|ENSG00000113657|chr5:147395638-147395638|G/-|frameshift_variant;ENSG00000072832|ENST00000324989|CRMP1;ENSG00000113657|ENST00000343218|DPYSL3;ENSG00000147647|ENST00000351513|DPYS;ENST00000506216.5_1_4:5749932-5890196:-|nuORF;ENST00000511535.1_1_4:5823489-5889136:-|nuORF;nc|ENSG00000072832|Q14194|CRMP1;nc|ENSG00000113657|Q14195|DPYSL3	129.68262048586715	0.015338143639892752	6				NaN	NaN	0	NaN	13351	4245	17597
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17599	43.927	NaN	351.41	30	0	137.83	0.03	+			29992	PPGPAGSA	8	17	327.1651207550331	NaN	0	327.16510009765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PPGPAGSA_	COL2A1|p.P1046Lfs*84|1|0.13|ENSG00000139219|chr12:47977628-47977628|G/-|frameshift_variant;COL2A1|p.P917Lfs*111|2|0.33|ENSG00000139219|chr12:47978742-47978742|G/-|frameshift_variant;ENSG00000139219|ENST00000380518|COL2A1;nc|ENSG00000139219|P02458-1|COL2A1	28.2542754592877	1.7418937515398478	6				NaN	NaN	0	NaN	13352	4245	17597
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17610	43.951	NaN	1851.9	30	0	257.98	0.214	+			4184	ATFMEVLTK	9	57	520.2789293495388	1038.5433057658774	2	520.2780151367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATFMEVLTK_	ENSG00000196712|ENST00000358273|NF1;ENST00000493220.5_2_17:29556858-29657521:+|nuORF;ENST00000495910.6_1_17:29490228-29576996:+|nuORF;nc|ENSG00000196712|P21359-2|NF1;nc|ENSG00000196712|P21359-4|NF1;nc|ENSG00000196712|P21359-6|NF1;NF1|p.F2429Qfs*7|1|0.17|ENSG00000196712|chr17:31349214-31349215|-/CAAGTAAGAATTAATT|frameshift_variant;NF1|p.K1386Rfs*20|1|0.33|ENSG00000196712|chr17:31252978-31252978|A/-|frameshift_variant	88.17693792209575	0.07000514020414955	6				NaN	NaN	0	NaN	13360	4248	17609
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17611	43.954	NaN	1756.9	30	0	721.17	0.106			+	-1	SNHLKRFMQ	9	56	588.8008029557284	1175.5870529782567	2	588.8001098632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_SNHLKRFM(Oxidation (M))Q_	REV__ENST00000563514.1_1_16:88926246-88927364:+|nuORF	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	13361	4248	17609
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17612	43.956	NaN	885.48	30	0	118.79	0.034	+			7949	DSLVEHDE	8	42	472.2029329425253	NaN	0	472.2024230957031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DSLVEHDE_	ENSG00000106772|ENST00000376718|PRUNE2;nc|ENSG00000106772|Q8WUY3-2|PRUNE2;nc|ENSG00000106772|Q8WUY3-3|PRUNE2;nc|ENSG00000106772|Q8WUY3-4|PRUNE2;PRUNE2|p.L2591Qfs*12|1|0.19|ENSG00000106772|chr9:76703839-76703842|CTAA/-|frameshift_variant	42.47446043378293	1.7418937515398478	6				NaN	NaN	0	NaN	13362	4248	17609
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17623	43.98	NaN	2565.7	30	0	968.66	0.144	+			30823	QEELVKISL	9	62	529.8091629865249	1057.6037730398498	2	530.3114013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QEELVKISL_	COL6A3|p.A2956Lfs*45|1|0.33|ENSG00000163359|chr2:237336234-237336234|C/-|frameshift_variant;COL6A3|p.A2957Lfs*44|1|0.33|ENSG00000163359|chr2:237336232-237336232|A/-|frameshift_variant;COL6A3|p.G1770Vfs*12|1|0.05|ENSG00000163359|chr2:237366878-237366879|-/TGGTGTAA|frameshift_variant;COL6A3|p.G2207Efs*35|1|0.22|ENSG00000163359|chr2:237354908-237354908|G/-|frameshift_variant;COL6A3|p.G3016Vfs*19|1|0.34|ENSG00000163359|chr2:237334810-237334810|G/-|frameshift_variant;COL6A3|p.P2319Qfs*12|1|0.06|ENSG00000163359|chr2:237348359-237348359|G/-|frameshift_variant;COL6A3|p.V1771Sfs*8|3|0.08|ENSG00000163359|chr2:237366876-237366876|C/-|frameshift_variant;ENSG00000163359|ENST00000295550|COL6A3;nc|ENSG00000163359|P12111-2|COL6A3;nc|ENSG00000163359|P12111-3|COL6A3;nc|ENSG00000163359|P12111-4|COL6A3;nc|ENSG00000163359|P12111-5|COL6A3	58.2462437865262	0.22823408064396822	6				NaN	NaN	0	NaN	13370	4251	17622
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17636	44.009	NaN	2572.3	30	0	404.6	0.144			+	-1	VLPTSSLSLC	10	56	538.7857136344384	1075.5568743356766	2	538.7862548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_VLPTSSLSLC(Carbamidomethyl (C))_	REV__ENSG00000150403|ENST00000434316|TMCO3;REV__nc|ENSG00000150403|Q6UWJ1-2|TMCO3;REV__nc|ENSG00000150403|Q6UWJ1-3|TMCO3	53.351449002276354	0.42630798468005626	6				NaN	NaN	0	NaN	13380	4254	17635
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17652	44.051	NaN	956.2	30	0	136.75	0.143			+	30403	PVSTGILDGY	10	49	511.2640915344304	1020.5136301356608	2	511.2641296386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PVSTGILDGY_	REV__CTTNBP2|p.A368T|1|0.28|ENSG00000077063|chr7:117792094-117792094|C/T|missense_variant	32.81241826257853	0.6118718159329168	6				NaN	NaN	0	NaN	13390	4260	17651
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17673	44.102	NaN	1044.4	30	0	123.36	0.143			+	17307	IAEIGEEKF	9	46	518.2720947265625	NaN	0	518.2720947265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IAEIGEEKF_	REV__tr|U7SWE1|U7SWE1_FUSNUHTHtetR-typedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00996PE=4SV=1	51.33545320467046	0.19748963086191895	6				NaN	NaN	0	NaN	13405	4266	17672
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17687	44.141	NaN	1564.2	30	0	292.9	0.214	+			47443	VPTTGIIEY	9	48	496.7691345214844	NaN	0	496.7691345214844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VPTTGIIEY_	ENSG00000088256|ENST00000078429|GNA11;ENSG00000156049|ENST00000341700|GNA14;ENSG00000156052|ENST00000286548|GNAQ;GNA11|p.G208Afs*16|1|0.38|ENSG00000088256|chr19:3118936-3118936|G/-|frameshift_variant;GNAQ|p.R183Q|1|0.28|ENSG00000156052|chr9:77797577-77797577|C/T|missense_variant	44.116797842482775	0.2472372736944149	6				NaN	NaN	0	NaN	13413	4272	17686
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17688	44.145	NaN	1310.5	30	0	96.278	0.032				-1	 	0	50	391.22547470307455	780.4363964729491	2	391.2249450683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13414	4272	17686
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17705	44.187	NaN	1564.9	30	0	197.57	0.143	+			9830	EPLGKSWAF	9	53	517.7703410008382	1033.5261290684764	2	517.770751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EPLGKSWAF_	ENSG00000184434|ENST00000380055|LRRC19	27.882242232435846	0.5426732730940306	6				NaN	NaN	0	NaN	13425	4278	17704
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17723	44.232	NaN	1279.9	30	0	68.817	0.14	+			30048	PPVLDTAI	8	42	413.23849438092725	NaN	0	413.23809814453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PPVLDTAI_	ENSG00000203757|ENST00000368145|OR6K3;nc|ENSG00000203757|Q8NGY3|OR6K3;OR6K3|p.L275V|1|0.35|ENSG00000203757|chr1:158717341-158717341|A/C|missense_variant	28.2542754592877	1.7418937515398478	6				NaN	NaN	0	NaN	13437	4284	17722
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17767	44.35	NaN	860.23	30	0	117.56	0.144	+			48705	VTTPFPALPQ	10	49	535.7987670898438	NaN	0	535.7987670898438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTTPFPALPQ_	ENSG00000063169|ENST00000594866|BICRA;nc|ENSG00000063169|Q9NZM4-2|BICRA	25.57405402267927	0.4162033004763879	6				NaN	NaN	0	NaN	13466	4299	17766
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17780	44.379	NaN	2416.3	30	0	167.83	0.144	+			37914	SPDATIRIW	9	58	529.7856136915364	1057.5566744498726	2	529.7858276367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SPDATIRIW_	ENSG00000110107|ENST00000227524|PRPF19;PRPF19|p.S440Hfs*2|1|0.3|ENSG00000110107|chr11:60897945-60897945|A/-|frameshift_variant	112.41091882917199	0.026537921851008135	6				NaN	NaN	0	NaN	13476	4302	17779
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17811	44.457	NaN	1233.7	30	0	103.98	0.142	+			22443	KTLDVFNI	8	52	475.2713317871094	NaN	0	475.2713317871094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTLDVFNI_	ENSG00000129003|ENST00000644861|VPS13C;ENSG00000197969|ENST00000360280|VPS13A;nc|ENSG00000129003|Q709C8-2|VPS13C;nc|ENSG00000129003|Q709C8-3|VPS13C;nc|ENSG00000129003|Q709C8-4|VPS13C;nc|ENSG00000197969|Q96RL7-2|VPS13A;nc|ENSG00000197969|Q96RL7-3|VPS13A;nc|ENSG00000197969|Q96RL7-4|VPS13A;VPS13A|p.I1709Nfs*6|1|0.34|ENSG00000197969|chr9:77318397-77318398|-/A|frameshift_variant;VPS13A|p.K1113Rfs*30|1|0.13|ENSG00000197969|chr9:77283645-77283645|A/-|frameshift_variant;VPS13A|p.M1697Cfs*13|1|0.07|ENSG00000197969|chr9:77318363-77318363|A/-|frameshift_variant;VPS13A|p.N2071Tfs*18|2|0.32|ENSG00000197969|chr9:77337367-77337367|A/-|frameshift_variant;VPS13A|p.Y2315Ifs*2|1|0.09|ENSG00000197969|chr9:77340463-77340463|T/-|frameshift_variant;VPS13C|p.D1169Ifs*15|1|0.38|ENSG00000129003|chr15:61962469-61962469|C/-|frameshift_variant;VPS13C|p.E2463Nfs*18|1|0.25|ENSG00000129003|chr15:61920157-61920157|C/-|frameshift_variant;VPS13C|p.N1066Ifs*25|2|0.27|ENSG00000129003|chr15:61964716-61964716|T/-|frameshift_variant;VPS13C|p.N3163Sfs*6|1|0.05|ENSG00000129003|chr15:61882732-61882733|-/TTATCATCAC|frameshift_variant;VPS13C|p.P3597Lfs*3|1|0.26|ENSG00000129003|chr15:61868732-61868732|G/-|frameshift_variant;VPS13C|p.S1021Hfs*3|1|0.08|ENSG00000129003|chr15:61964852-61964852|A/-|frameshift_variant;VPS13C|p.S463Vfs*3|1|0.39|ENSG00000129003|chr15:61991770-61991771|-/T|frameshift_variant	39.252832667884924	1.7418937515398478	6				NaN	NaN	0	NaN	13498	4311	17810
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17820	44.48	NaN	1621	30	0	168.32	0.214	+			17337	IAIGSQPVL	9	41	449.2741509840871	896.5337490349742	2	449.2742919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IAIGSQPVL_	ENSG00000068912|ENST00000185150|ERLEC1;nc|ENSG00000068912|Q96DZ1-3|ERLEC1	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	13504	4314	17819
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17821	44.484	NaN	2597.4	30	0	364.43	0.106	+			11983	FVPVANEL	8	54	444.74523492854695	887.4759169238939	2	444.7452392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FVPVANEL_	ENSG00000176658|ENST00000318217|MYO1D	71.29570347882199	0.39610197767395533	6				NaN	NaN	0	NaN	13505	4314	17819
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17822	44.486	NaN	1346.1	30	0	557.83	0.034	+			31502	QLENIQVL	8	36	478.77510758772587	955.5356622422518	2	478.7746276855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QLENIQVL_	ENSG00000122966|ENST00000392521|CIT;ENST00000537607.5_1_12:120126039-120222037:-|nuORF;ENST00000545913.5_1_12:120126039-120222037:-|nuORF;nc|ENSG00000122966|O14578-3|CIT;nc|ENSG00000122966|O14578|CIT	47.657333605630114	0.6087971902037268	6				NaN	NaN	0	NaN	13506	4314	17819
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17852	44.558	NaN	1241.5	30	0	265.21	0.143	+			29861	PLESTGAVVY	10	43	518.2712453265864	1034.5279377199727	2	518.2703247070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PLESTGAVVY_	ENSG00000034971|ENST00000037502|MYOC	53.351449002276354	0.42630798468005626	6				NaN	NaN	0	NaN	13527	4323	17851
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17862	44.582	NaN	1258.1	30	0	167.15	0.214	+			10832	FASEVSNVL	9	45	483.25095669838674	964.4873604635735	2	483.2500305175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FASEVSNVL_	ENSG00000136738|ENST00000377524|STAM;nc|ENSG00000136738|Q92783-2|STAM	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	13534	4326	17861
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17863	44.585	NaN	1053.5	30	0	136.73	0.034	+			37280	SLAISLSLK	9	48	466.294875120641	NaN	0	466.29510498046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLAISLSLK_	ENST00000403534.7_1_19:45251011-45251212:+|nuORF	36.446750945000026	0.29355505452396785	6				NaN	NaN	0	NaN	13535	4326	17861
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17876	44.613	NaN	1903.3	30	0	268.76	0.143	+			27574	MPFVHVVY	8	52	496.2577246703392	990.5008964074784	2	496.2568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MPFVHVVY_	ENST00000602122.5_1_19:35739636-35739768:+|nuORF	112.70496060052128	0.24366946069435766	6				NaN	NaN	0	NaN	13545	4329	17875
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17883	44.633	NaN	901.12	30	0	139.9	0.214	+			11516	FPDKVALLQ	9	48	515.8011292755702	NaN	0	515.80224609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FPDKVALLQ_	ENSG00000163900|ENST00000421852|TMEM41A;ENST00000467061.1_1_3:185212881-185213145:-|nuORF;ENST00000475480.5_1_3:185199046-185216749:-|nuORF;TMEM41A|p.K241Nfs*9|1|0.21|ENSG00000163900|chr3:185491609-185491609|T/-|frameshift_variant;TMEM41A|p.N197Kfs*31|1|0.08|ENSG00000163900|chr3:185491741-185491742|-/CAAGTACTGC|frameshift_variant	34.172542307311794	0.30503706118289736	6				NaN	NaN	0	NaN	13549	4332	17882
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17884	44.636	NaN	1299.5	30	0	157.04	0.035	+			47894	VSLILSPKF	9	41	502.31368561656757	1002.6128182999352	2	502.3133239746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSLILSPKF_	ENST00000539693.1_1_19:19313985-19314099:-|nuORF	42.86426827375447	0.38666266728046506	6				NaN	NaN	0	NaN	13550	4332	17882
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17912	44.705	NaN	1816.6	30	0	473.51	0.143			+	-1	HVIDAIKGM	9	44	500.2670393432401	998.5195257532803	2	500.2669677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_HVIDAIKGM(Oxidation (M))_	REV__ENSG00000138399|ENST00000453153|FASTKD1;REV__ENST00000487293.2_1_2:170416895-170419880:-|nuORF;REV__ENST00000506586.1_1_5:93928514-93929327:+|nuORF;REV__nc|ENSG00000138399|Q53R41-2|FASTKD1	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	13569	4341	17911
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17920	44.726	NaN	1139.7	30	0	74.727	0.141			+	43549	THKRGLSA	8	51	435.25136961259733	NaN	0	435.2513732910156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_THKRGLSA_	REV__ENSG00000156299|ENST00000541036|TIAM1;REV__nc|ENSG00000156299|Q13009-2|TIAM1;REV__TIAM1|p.Q528Rfs*36|1|0.37|ENSG00000156299|chr21:31245491-31245491|A/-|frameshift_variant	24.20275056022122	1.7418937515398478	6				NaN	NaN	0	NaN	13574	4344	17919
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17932	44.762	NaN	2700.3	30	0	580.38	0.214	+			28382	NELITNAL	8	49	444.24563944097525	886.4767259487505	2	444.2451477050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NELITNAL_	ENSG00000079459|ENST00000220584|FDFT1;ENST00000446331.6_1_8:11660331-11696115:+|nuORF;nc|ENSG00000079459|P37268-2|FDFT1;nc|ENSG00000079459|P37268-3|FDFT1;nc|ENSG00000079459|P37268-4|FDFT1;nc|ENSG00000079459|P37268-5|FDFT1	90.60085204095205	0.2756512185673585	6				NaN	NaN	0	NaN	13580	4350	17931
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17933	44.765	NaN	1555.7	30	0	121.71	0.032				-1	 	0	55	413.2385442695126	824.4625356058252	2	413.2383117675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13581	4350	17931
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17962	44.836	NaN	1218.7	30	0	165.16	0.144	+			30072	PQLLKEAGYT	10	44	560.3062611523034	1118.5979693714066	2	560.3067626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PQLLKEAGYT_	ENSG00000113273|ENST00000264914|ARSB;nc|ENSG00000113273|P15848-2|ARSB	36.31764250033197	0.5830761606467809	6				NaN	NaN	0	NaN	13601	4359	17961
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17980	44.883	NaN	1263.4	30	0	150.95	0.214	+			22256	KTASFTTKI	9	50	498.79059152192735	995.5666301106547	2	498.7907409667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTASFTTKI_	ENSG00000138892|ENST00000433387|TTLL8;nc|ENSG00000138892|A6PVC2-2|TTLL8;nc|ENSG00000138892|A6PVC2|TTLL8	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	13613	4365	17979
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17981	44.886	NaN	816.74	30	0	79.499	0.032			+	21893	KRRAVPCWR	9	43	391.2254967158277	NaN	0	391.2256164550781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KRRAVPCWR_	REV__ENST00000534280.5_1_19:50183451-50183795:+|nuORF	18.262085536374414	0.37517301184500873	6				NaN	NaN	0	NaN	13614	4365	17979
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18013	44.963	NaN	1708.3	30	0	337.41	0.142	+			35708	SDLKVILM	8	46	459.7704643336662	917.5263757341324	2	459.7701110839844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SDLKVILM_	DHX36|p.M705Nfs*20|1|0.33|ENSG00000174953|chr3:154284905-154284906|-/T|frameshift_variant;DHX36|p.R854Efs*4|3|0.36|ENSG00000174953|chr3:154280586-154280586|T/-|frameshift_variant;ENSG00000174953|ENST00000496811|DHX36;nc|ENSG00000174953|Q9H2U1-2|DHX36;nc|ENSG00000174953|Q9H2U1-3|DHX36	60.97194046774394	0.49215940876911696	6				NaN	NaN	0	NaN	13637	4374	18012
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18024	44.988	NaN	1373.5	30	0	196.44	0.143			+	9087	EGILVVKFV	9	50	502.31368561656757	1002.6128182999352	2	502.3130187988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EGILVVKFV_	REV__ENSG00000132698|ENST00000361084|RAB25;REV__ENST00000463614.1_1_1:156031167-156035898:+|nuORF	44.377184641726394	0.36891676396732553	6				NaN	NaN	0	NaN	13645	4377	18023
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18050	45.058	NaN	1030.8	30	0	71.576	0.143	+			35059	SAEWLGVLK	9	50	501.7852783203125	NaN	0	501.7852783203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAEWLGVLK_	ENSG00000184634|ENST00000374080|MED12;MED12|p.E1337Kfs*8|1|0.26|ENSG00000184634|chrX:71130173-71130173|G/-|frameshift_variant;nc|ENSG00000184634|Q93074-2|MED12;nc|ENSG00000184634|Q93074-3|MED12	44.377184641726394	0.24544280798894275	6				NaN	NaN	0	NaN	13662	4386	18049
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18069	45.105	NaN	3020	30	0	279.59	0.14				-1	 	0	60	413.2385442695126	824.4625356058252	2	413.2381286621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13675	4392	18068
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18089	45.154	NaN	807.07	30	0	46.39	0.141	+			9821	EPGRLARA	8	52	435.25136961259733	NaN	0	435.2515869140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EPGRLARA_	ENST00000458270.2_1_8:144718367-144732071:+|nuORF	26.79610172149135	1.7418937515398478	6				NaN	NaN	0	NaN	13689	4398	18088
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18137	45.284	NaN	1355.2	30	0	347.96	0.141	+			42251	TAAPVVPEL	9	36	448.7587209604777	895.5028889877555	2	448.7586669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAAPVVPEL_	ENSG00000134318|ENST00000315872|ROCK2;ROCK2|p.K1351Sfs*17|1|0.34|ENSG00000134318|chr2:11192259-11192259|T/-|frameshift_variant;ROCK2|p.S684Afs*5|1|0.34|ENSG00000134318|chr2:11211834-11211834|T/-|frameshift_variant	51.33545320467046	0.2872990594074956	6				NaN	NaN	0	NaN	13719	4416	18136
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18146	45.306	NaN	904.6	30	0	61.383	0.144				-1	AFMKGVFTF	9	45	532.267578125	NaN	0	532.267578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_AFM(Oxidation (M))KGVFTF_	ENSG00000244187|ENST00000290079|TMEM141;ENST00000465017.5_1_9:139685862-139687281:+|nuORF;ENST00000489739.1_1_9:139685858-139686514:+|nuORF	39.252832667884924	0.27938773122138094	6				NaN	NaN	0	NaN	13725	4419	18145
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18169	45.369	NaN	2194.6	30	0	661.95	0.143	+			39435	STEFLALMK	9	48	520.2792367720378	1038.5439206108756	2	520.2794799804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STEFLALMK_	DYNC1H1|p.F2635Lfs*67|1|0.16|ENSG00000197102|chr14:102017141-102017141|T/-|frameshift_variant;DYNC1H1|p.G1902Vfs*27|2|0.27|ENSG00000197102|chr14:102006154-102006154|G/-|frameshift_variant;DYNC1H1|p.K3112Hfs*3|1|0.31|ENSG00000197102|chr14:102027998-102027999|-/TCACAAG|frameshift_variant;DYNC1H1|p.W4201Gfs*43|1|0.42|ENSG00000197102|chr14:102043958-102043958|G/-|frameshift_variant;ENSG00000197102|ENST00000360184|DYNC1H1	122.1759843771914	0.019882474861609503	6				NaN	NaN	0	NaN	13739	4428	18168
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18178	45.391	NaN	1711.3	30	0	372.17	0.143	+			45063	TVHILEMY	8	50	503.2580567048113	1004.5015604764226	2	503.2572021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVHILEMY_	DOCK5|p.S612Kfs*4|1|0.33|ENSG00000147459|chr8:25325472-25325473|-/C|frameshift_variant;ENSG00000147459|ENST00000276440|DOCK5;nc|ENSG00000147459|Q9H7D0-2|DOCK5	54.76467175910256	0.5536104764165384	6				NaN	NaN	0	NaN	13745	4431	18177
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18199	45.442	NaN	1852.8	30	0	167.02	0.215				-1	 	0	54	413.2385442695126	824.4625356058252	2	413.23846435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13760	4437	18198
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18200	45.446	NaN	1753.1	30	0	806.74	0.036	+			50932	YGTLILKNY	9	46	542.8066888229955	NaN	0	542.8062744140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YGTLILKNY_	tr|U7SLD7|U7SLD7_FUSNUHelicaseSNFOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01975PE=4SV=1	25.57405402267927	0.3484490411150625	6				NaN	NaN	0	NaN	13761	4437	18198
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18225	45.501	NaN	459.75	30	0	66.974	0.214			+	29401	PASAPPSA	8	27	349.1781374268514	NaN	0	349.1780700683594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PASAPPSA_	REV__ENST00000571245.5_1_17:3831639-3833719:-|nuORF	25.450171626174864	1.7418937515398478	6				NaN	NaN	0	NaN	13780	4443	18224
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18226	45.505	NaN	609.67	30	0	222.69	0.106	+			31633	QMLFESTDV	9	28	357.1670837402344	NaN	0	357.1670837402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QMLFESTDV_	XKR7|p.A226T|1|0.34|ENSG00000260903|chr20:31995159-31995159|G/A|missense_variant	19.996771675451527	0.3693019437812985	6				NaN	NaN	0	NaN	13781	4443	18224
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18227	45.507	NaN	1117.8	30	0	122.4	0.035			+	27768	MRGVWSSRA	9	46	525.267661764597	NaN	0	525.2680053710938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MRGVWSSRA_	REV__ENSG00000185522|ENST00000329451|LMNTD2;REV__LMNTD2|p.D349Tfs*14|1|0.37|ENSG00000185522|chr11:556520-556520|C/-|frameshift_variant	54.776311868738084	0.17377682019723872	6				NaN	NaN	0	NaN	13782	4443	18224
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18266	45.596	NaN	983.1	30	0	229.36	0.143	+			49883	VYTSGIYNI	9	34	515.2665995601642	1028.5186461871283	2	515.2672119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYTSGIYNI_	ENSG00000079308|ENST00000682258|TNS1;nc|ENSG00000079308|Q9HBL0-1|TNS1;nc|ENSG00000079308|Q9HBL0-2|TNS1;TNS1|p.G470Afs*23|1|0.3|ENSG00000079308|chr2:217848733-217848733|C/-|frameshift_variant;TNS1|p.G532Afs*9|1|0.23|ENSG00000079308|chr2:217848547-217848547|C/-|frameshift_variant;TNS1|p.G637Efs*11|1|0.16|ENSG00000079308|chr2:217848232-217848232|C/-|frameshift_variant;TNS1|p.P973Rfs*13|2|0.28|ENSG00000079308|chr2:217831535-217831535|G/-|frameshift_variant	39.252832667884924	0.4290233611298554	6				NaN	NaN	0	NaN	13812	4452	18265
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18276	45.619	NaN	1520.3	30	0	226.24	0.142	+			17383	IAMGMAQAL	9	44	453.23309989688323	904.4516468605665	2	453.2334289550781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IAMGMAQAL_	ENSG00000183207|ENST00000595090|RUVBL2;ENST00000594017.5_1_19:49497156-49513425:+|nuORF;ENST00000596247.5_1_19:49507512-49519096:+|nuORF;nc|ENSG00000183207|Q9Y230-2|RUVBL2	79.9392285194092	0.09781135437301468	6				NaN	NaN	0	NaN	13819	4455	18275
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18287	45.645	NaN	2897	30	0	497.27	0.142	+			42502	TANSITVTF	9	48	477.251057446264	952.487561959328	2	477.2506408691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TANSITVTF_	ENSG00000100307|ENST00000216133|CBX7;ENST00000490741.1_1_22:39529898-39530769:-|nuORF	104.0567914643314	0.03506238181059741	6				NaN	NaN	0	NaN	13827	4458	18286
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18307	45.694	NaN	1268.7	30	0	547.84	0.138				-1	 	0	29	337.16968932108546	672.3248257089709	2	337.1697082519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13841	4464	18306
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18330	45.749	NaN	2738.2	30	0	723.84	0.14	+			46991	VKRNGPGG	8	40	392.7251483154739	783.4357436977479	2	392.7249450683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VKRNGPGG_	ENST00000471073.1_1_22:21355515-21355995:-|nuORF;ENST00000498406.1_1_22:21355062-21355995:-|nuORF	8.822329726475273	0.7821568878176242	6				NaN	NaN	0	NaN	13858	4470	18329
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18341	45.774	NaN	15671	30	0	4167	0.143	+			41307	SVLNLVIVK	9	65	492.8263485742641	983.6381442153282	2	492.8264465332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVLNLVIVK_	ENSG00000137154|ENST00000380394|RPS6;ENST00000464444.1_1_19:13005132-13005321:+|nuORF	190.2614974402762	0.00026591377982909756	6				NaN	NaN	0	NaN	13866	4473	18340
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18376	45.866	NaN	1118.2	30	0	85.366	0.14	+			33639	RLYREKKSAS	10	48	413.2379510922291	NaN	0	413.23822021484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RLYREKKSAS_	ENSG00000131042|ENST00000314446|LILRB2;LILRB2|p.P428Hfs*35|1|0.41|ENSG00000131042|chr19:54277915-54277915|G/-|frameshift_variant;nc|ENSG00000131042|Q8N423-1|LILRB2;nc|ENSG00000131042|Q8N423-3|LILRB2	25.125986553469783	0.41767453237088564	6				NaN	NaN	0	NaN	13889	4485	18375
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18419	45.988	NaN	2777.5	30	0	473.34	0.141	+			15857	GYGGGFGGGF	10	46	438.18786822916286	874.3611835251257	2	438.18707275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GYGGGFGGGF_	CON__P12035;ENSG00000186442|ENST00000417996|KRT3	154.33851538923568	0.0077252011124608715	6				NaN	NaN	0	NaN	13914	4503	18418
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18427	46.009	NaN	987.45	30	0	63.702	0.142				-1	 	0	39	435.2517962744541	868.4890396157082	2	435.2505187988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13919	4506	18426
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18475	46.154	NaN	1350.7	30	0	221.88	0.214				-1	 	0	43	496.2771999514945	990.539846969789	2	496.2767028808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13946	4527	18474
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18476	46.158	NaN	946.64	30	0	148.38	0.035	+			8064	DVKGKVLII	9	38	492.82647705078125	NaN	0	492.82647705078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DVKGKVLII_	tr|U7SNC7|U7SNC7_FUSNUD-aminoacyl-tRNAdeacylaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=dtdPE=3SV=1	32.81241826257853	0.3119040447479903	6				NaN	NaN	0	NaN	13947	4527	18474
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18497	46.214	NaN	2742.2	30	0	546.25	0.143	+			29295	NYISGIQTI	9	51	504.7724584409087	1007.5303639486174	2	504.7735290527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NYISGIQTI_	ENSG00000189091|ENST00000302516|SF3B3;nc|ENSG00000189091|Q15393-3|SF3B3	101.45984612302182	0.0377122763612125	6				NaN	NaN	0	NaN	13959	4536	18496
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18531	46.303	NaN	978.79	30	0	65.442	0.142			+	7896	DRVLRPAS	8	46	457.2645800173204	NaN	0	457.2648010253906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DRVLRPAS_	REV__ENST00000427606.2_1_8:146220430-146220631:-|nuORF	20.94693142431847	1.7418937515398478	6				NaN	NaN	0	NaN	13981	4548	18530
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18550	46.351	NaN	2232.3	30	0	158.78	0.141				-1	 	0	63	435.2517962744541	868.4890396157082	2	435.2516784667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13994	4554	18549
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18558	46.372	NaN	2059.2	30	0	880.66	0.143			+	37223	SKMIVTCLK	9	57	511.7896814922854	1021.5648100513708	2	511.78997802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SKMIVTCLK_	REV__ENSG00000149295|ENST00000362072|DRD2;REV__ENST00000540600.5_1_11:113285027-113346393:-|nuORF;REV__nc|ENSG00000149295|P14416-3|DRD2	69.6276240434122	0.14239879520340665	6				NaN	NaN	0	NaN	13999	4557	18557
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18573	46.414	NaN	4979.3	30	0	1084.3	0.214			+	42585	TASSLFLHL	9	60	494.7775357164336	987.5405184996672	2	494.777099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TASSLFLHL_	REV__ENSG00000152463|ENST00000378228|OLAH;REV__nc|ENSG00000152463|Q9NV23-2|OLAH;REV__OLAH|p.K164Sfs*10|2|0.24|ENSG00000152463|chr10:15065666-15065666|C/-|frameshift_variant;REV__OLAH|p.N251Ifs*6|1|0.13|ENSG00000152463|chr10:15073182-15073183|-/TTGTATTC|frameshift_variant	101.21157088398209	0.03796561369277615	6				NaN	NaN	0	NaN	14008	4563	18572
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18574	46.417	NaN	2053.8	30	0	395.65	0.035	+			45027	TVFSGRGKR	9	55	504.2930968661814	1006.5716407991628	2	504.29345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVFSGRGKR_	ENST00000314134.3_1_11:45825971-45826406:+|nuORF	54.776311868738084	0.25715957988447635	6				NaN	NaN	0	NaN	14009	4563	18572
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18585	46.443	NaN	1191	30	0	229.79	0.143	+			28067	NAATSFQVL	9	49	475.7518615722656	NaN	0	475.7518615722656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAATSFQVL_	ENSG00000198911|ENST00000361204|SREBF2;nc|ENSG00000198911|Q12772-2|SREBF2	63.53385203322761	0.134247007536971	6				NaN	NaN	0	NaN	14017	4566	18584
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18613	46.514	NaN	1404.9	30	0	265.4	0.142			+	16105	HDLAYVAAL	9	47	486.76160320761574	971.5086534820315	2	486.7613525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HDLAYVAAL_	REV__ENSG00000087008|ENST00000356406|ACOX3;REV__ENST00000510365.5_1_4:8376552-8417570:-|nuORF;REV__nc|ENSG00000087008|O15254-2|ACOX3	47.91560031466742	0.327412564698279	6				NaN	NaN	0	NaN	14036	4575	18612
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18655	46.636	NaN	2414.4	30	0	290.43	0.143	+			29142	NVADVVIKF	9	52	502.7930106500182	1003.5714683668364	2	503.2929382324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NVADVVIKF_	ENSG00000118705|ENST00000237530|RPN2;nc|ENSG00000118705|P04844-2|RPN2	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	14060	4593	18654
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18683	46.707	NaN	1664.1	30	0	59.437	0.141				-1	 	0	60	435.2517962744541	868.4890396157082	2	435.2515563964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14079	4602	18682
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18694	46.733	NaN	1496.3	30	0	236.47	0.141	+			17379	IAMATVTAL	9	43	445.75462450270635	889.4946960722127	2	445.75445556640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IAMATVTAL_	ENSG00000109107|ENST00000226253|ALDOC;ENSG00000149925|ENST00000642816|ALDOA;nc|ENSG00000149925|P04075|ALDOA	94.00642277110589	0.05356993013874309	6				NaN	NaN	0	NaN	14087	4605	18693
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18763	46.938	NaN	808.64	30	0	307.54	0.14			+	-1	VAMNRRGSDGG	11	33	379.18025634251717	NaN	0	379.1802978515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_VAM(Oxidation (M))NRRGSDGG_	REV__ENST00000492540.5_1_9:139743852-139744679:+|nuORF	30.568863376406313	0.42918353898720446	6				NaN	NaN	0	NaN	14126	4635	18762
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18801	47.042	NaN	1399.2	30	0	290.53	0.145	+			10568	EYFKSFNF	8	51	541.2542788855307	NaN	0	541.2540283203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EYFKSFNF_	ENSG00000151470|ENST00000425929|C4orf33	60.97194046774394	1.7418937515398478	6				NaN	NaN	0	NaN	14149	4650	18800
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18828	47.121	NaN	1020.4	30	0	81.499	0.141				-1	 	0	49	435.2517962744541	868.4890396157082	2	435.25164794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14164	4662	18827
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18840	47.149	NaN	1423.1	30	0	576.7	0.214	+			25017	LLGPGACS	8	36	359.18294205754887	NaN	0	359.18292236328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LLGPGACS_	PRSS53|p.R442G|1|0.35|ENSG00000151006|chr16:31084659-31084659|T/C|missense_variant	23.036711822280957	1.7418937515398478	6				NaN	NaN	0	NaN	14173	4665	18839
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18841	47.152	NaN	1228.1	30	0	249.41	0.106	+			43922	TPAGVQVIL	9	29	449.2741221047394	NaN	0	449.2742919921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TPAGVQVIL_	ENSG00000130312|ENST00000252602|MRPL34	47.657333605630114	0.2228375344433429	6				NaN	NaN	0	NaN	14174	4665	18839
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18842	47.154	NaN	1031.1	30	0	100.84	0.035	+			2433	APFSKVLTF	9	45	505.290005203645	1008.5654574740901	2	505.2904052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_APFSKVLTF_	ENSG00000120694|ENST00000320027|HSPH1;ENSG00000170606|ENST00000304858|HSPA4;HSPA4|p.S737Afs*9|1|0.18|ENSG00000170606|chr5:133103911-133103911|A/-|frameshift_variant;nc|ENSG00000120694|Q92598-2|HSPH1;nc|ENSG00000120694|Q92598-3|HSPH1;nc|ENSG00000120694|Q92598-4|HSPH1	51.19269402634007	0.2889735674168909	6				NaN	NaN	0	NaN	14175	4665	18839
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18870	47.216	NaN	1605.6	30	0	78.386	0.142			+	7728	DLSVARPR	8	66	457.26481363134354	912.5150743294871	2	457.26446533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DLSVARPR_	REV__ENST00000599938.5_1_19:8942000-8942791:-|nuORF	37.15910966729921	0.6739408393984688	6				NaN	NaN	0	NaN	14197	4671	18869
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18900	47.308	NaN	1201.6	30	0	119.7	0.142	+			2077	ALAWTSLAL	9	50	473.2745190878978	NaN	0	473.27410888671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ALAWTSLAL_	YIF1A|p.S239L|1|0.31|ENSG00000174851|chr11:66284892-66284892|G/A|missense_variant	57.81127852772723	0.15865383123342353	6				NaN	NaN	0	NaN	14212	4686	18899
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18906	47.325	NaN	630.59	30	0	74.291	0.141	+			42480	TANALALAM	9	35	438.23667620719345	874.4587994811869	2	438.2365417480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TANALALAM_	ENSG00000142507|ENST00000270586|PSMB6;ENST00000575643.1_1_17:4701246-4701714:+|nuORF	56.72105179125745	0.24094814563026265	6				NaN	NaN	0	NaN	14215	4689	18905
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18916	47.358	NaN	1985.9	30	0	293.11	0.143	+			28465	NFTNVAATF	9	51	492.74344713117205	983.4723413291441	2	492.7425537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NFTNVAATF_	ENSG00000131473|ENST00000352035|ACLY;ENST00000588547.1_1_17:40060903-40061877:-|nuORF;nc|ENSG00000131473|P53396-2|ACLY	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	14219	4695	18915
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18976	47.558	NaN	1407.7	30	0	84.667	0.142			+	46152	VDRPLRSA	8	58	457.26481363134354	912.5150743294871	2	457.2646179199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VDRPLRSA_	REV__ENST00000361545.9_1_7:73703847-73704045:+|nuORF	27.882242232435846	0.7440473649773525	6				NaN	NaN	0	NaN	14246	4728	18975
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19073	47.898	NaN	3867	30	0	862	0.14				-1	 	0	48	409.25554071459027	816.4965284959806	2	409.25518798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14286	4785	19072
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19079	47.916	NaN	1018.9	30	0	41.706	0.142			+	2810	ARVVLQNN	8	51	457.26481363134354	912.5150743294871	2	457.26434326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ARVVLQNN_	REV__ARHGEF7-ITM2B|1|fusion;REV__ARHGEF7-ITM2B|2|fusion;REV__ARHGEF7-ITM2B|3|fusion;REV__ARHGEF7-ITM2B|4|fusion;REV__ENSG00000102606|ENST00000646102|ARHGEF7;REV__nc|ENSG00000102606|Q14155-1|ARHGEF7;REV__nc|ENSG00000102606|Q14155-2|ARHGEF7;REV__nc|ENSG00000102606|Q14155-3|ARHGEF7;REV__nc|ENSG00000102606|Q14155-5|ARHGEF7;REV__nc|ENSG00000102606|Q14155-6|ARHGEF7;REV__nc|ENSG00000102606|Q14155|ARHGEF7	24.20275056022122	0.7724576178584145	6				NaN	NaN	0	NaN	14289	4788	19078
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19223	48.354	NaN	855.62	30	0	92.689	0.142			+	35486	SATIRKAPN	9	48	479.27741728006873	NaN	0	479.2782897949219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SATIRKAPN_	REV__ENSG00000145349|ENST00000511664|CAMK2D;REV__nc|ENSG00000145349|Q13557-10|CAMK2D;REV__nc|ENSG00000145349|Q13557-11|CAMK2D;REV__nc|ENSG00000145349|Q13557-12|CAMK2D;REV__nc|ENSG00000145349|Q13557-3|CAMK2D;REV__nc|ENSG00000145349|Q13557-4|CAMK2D;REV__nc|ENSG00000145349|Q13557-5|CAMK2D;REV__nc|ENSG00000145349|Q13557-6|CAMK2D;REV__nc|ENSG00000145349|Q13557-8|CAMK2D;REV__nc|ENSG00000145349|Q13557-9|CAMK2D;REV__nc|ENSG00000145349|Q13557|CAMK2D	26.69291269510374	0.34280015626154364	6				NaN	NaN	0	NaN	14367	4854	19222
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19280	48.534	NaN	1661.6	30	0	694.52	0.144	+			32582	QYASAFHFL	9	37	542.2676597810103	1082.5207666288204	2	542.2683715820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QYASAFHFL_	BBS4|p.E506Vfs*5|1|0.05|ENSG00000140463|chr15:72737544-72737545|AA/-|frameshift_variant;ENSG00000140463|ENST00000268057|BBS4;ENST00000562219.1_1_15:73023651-73027536:+|nuORF;nc|ENSG00000140463|Q96RK4-2|BBS4;nc|ENSG00000140463|Q96RK4-3|BBS4	55.50420428727701	0.2510918378945873	6				NaN	NaN	0	NaN	14394	4884	19279
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19286	48.553	NaN	1252.9	30	0	297.21	0.142			+	-1	ATFMKQPL	8	45	476.2523389374543	NaN	0	476.251708984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ATFM(Oxidation (M))KQPL_	REV__ENSG00000183735|ENST00000331710|TBK1;REV__ENST00000545392.1_1_12:64890804-64891535:+|nuORF	47.91560031466742	1.7418937515398478	6				NaN	NaN	0	NaN	14397	4887	19285
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19334	48.694	NaN	1537.7	30	0	221.78	0.142	+			28177	NAPLVNVTL	9	43	470.77703857421875	NaN	0	470.77703857421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAPLVNVTL_	ENSG00000216490|ENST00000407280|IFI30;ENST00000600463.1_1_19:18285864-18288180:+|nuORF	70.8162118820467	0.10318768208603292	6				NaN	NaN	0	NaN	14424	4908	19333
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19379	48.831	NaN	2125.4	30	0	351.1	0.141			+	35743	SDSKILII	8	41	444.77391877580135	887.5332846184027	2	444.7735900878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SDSKILII_	REV__ENSG00000088854|ENST00000252032|DNAAF9	88.64286706044652	0.2815785716369046	6				NaN	NaN	0	NaN	14448	4929	19378
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19402	48.905	NaN	664.96	30	0	194.97	0.142	+			6604	AYPLGDIPE	9	30	487.7453918457031	NaN	0	487.7453918457031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AYPLGDIPE_	ENSG00000156931|ENST00000625842|VPS8;ENST00000492449.5_1_3:184603882-184769810:+|nuORF;nc|ENSG00000156931|Q8N3P4-2|VPS8;nc|ENSG00000156931|Q8N3P4-3|VPS8	23.04248740728303	0.3589936788096251	6				NaN	NaN	0	NaN	14459	4941	19401
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19440	49.04	NaN	820.5	30	0	149.81	0.142	+			33305	RGRCPLLL	8	24	464.27927556997196	NaN	0	464.27960205078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RGRCPLLL_	ENSG00000198133|ENST00000554480|TMEM229B;TMEM229B|p.A128Pfs*30|1|0.31|ENSG00000198133|chr14:67473542-67473542|C/-|frameshift_variant	28.2542754592877	1.7418937515398478	6				NaN	NaN	0	NaN	14473	4965	19439
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19528	49.37	NaN	619.58	30	0	135.2	0.143			+	31795	QPLVGLQVY	9	32	508.7916259765625	NaN	0	508.7916259765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QPLVGLQVY_	REV__CELA1|p.G208Afs*7|1|0.14|ENSG00000139610|chr12:51329820-51329820|C/-|frameshift_variant;REV__ENSG00000139610|ENST00000293636|CELA1	24.20275056022122	0.35506675290109213	6				NaN	NaN	0	NaN	14504	5022	19527
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19547	49.43	NaN	806.08	30	0	127.64	0.144			+	-1	IEWLCLAY	8	35	534.2654300095437	1066.5163070858873	2	534.2653198242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_IEWLC(Carbamidomethyl (C))LAY_	REV__ENSG00000116783|ENST00000326637|TNNI3K;REV__nc|ENSG00000116783|Q59H18-1|TNNI3K;REV__nc|ENSG00000116783|Q59H18-4|TNNI3K	28.2542754592877	0.7411748056684583	6				NaN	NaN	0	NaN	14514	5031	19546
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19593	49.549	NaN	1902.1	30	0	1233.8	0.138				-1	 	0	28	340.2596411470692	678.5047293609384	2	340.2596435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14545	5046	19592
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19601	49.57	NaN	4271.4	30	0	1427.1	0.143	+			18013	IIGTIFIIK	9	51	509.3395499594524	1016.6645469857049	2	509.33953857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IIGTIFIIK_	ENSG00000204287|ENST00000395388|HLA-DRA	104.74654710444128	0.034358562718640136	6				NaN	NaN	0	NaN	14550	5049	19600
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19765	50.022	NaN	770.11	30	0	195.85	0.214	+			47074	VLIENVASL	9	38	479.28491566338784	956.5552783935757	2	479.2846984863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VLIENVASL_	ENSG00000176153|ENST00000389614|GPX2;GPX2|p.W152*|1|0.31|ENSG00000176153|chr14:64939605-64939605|C/-|frameshift_variant	52.936696900407355	0.27249468807391813	6				NaN	NaN	0	NaN	14654	5109	19764
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19766	50.026	NaN	1442.2	30	0	156.63	0.106	+			42088	SYGLDILHV	9	54	508.7748331637546	1015.5351133943092	2	509.2774353027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SYGLDILHV_	tr|U7SSK8|U7SSK8_FUSNUNADH:flavinoxidoreductase/NADHoxidaseN-terminaldomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01301PE=4SV=1	45.9519527083369	0.35044536499095585	6				NaN	NaN	0	NaN	14655	5109	19764
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19767	50.028	NaN	794.98	30	0	119.3	0.034			+	47192	VLVRCPRP	8	45	470.2795520815312	NaN	0	470.27911376953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VLVRCPRP_	REV__ENSG00000176170|ENST00000592299|SPHK1;REV__nc|ENSG00000176170|Q9NYA1-2|SPHK1;REV__nc|ENSG00000176170|Q9NYA1-3|SPHK1;REV__SPHK1|p.R301Pfs*44|1|0.38|ENSG00000176170|chr17:76387333-76387333|G/-|frameshift_variant	44.53106598305862	1.7418937515398478	6				NaN	NaN	0	NaN	14656	5109	19764
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19775	50.048	NaN	520.76	30	0	47.273	0.144			+	9031	EGEGGGRRPR	10	42	535.777587890625	NaN	0	535.777587890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EGEGGGRRPR_	REV__ENST00000606277.1_1_1:41157297-41157681:-|nuORF	24.519189625965996	0.41966695327750003	6				NaN	NaN	0	NaN	14661	5112	19774
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19832	50.211	NaN	1662.3	30	0	779.89	0.141	+			25166	LLVLEGQA	8	37	421.75293801289797	NaN	0	421.75311279296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LLVLEGQA_	ENSG00000156564|ENST00000338305|LRFN2;LRFN2|p.W640Lfs*15|1|0.41|ENSG00000156564|chr6:40392395-40392396|-/G|frameshift_variant	19.359975847455235	1.7418937515398478	6				NaN	NaN	0	NaN	14694	5136	19831
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20089	51.276	NaN	1052.8	30	0	279.27	0.143			+	-1	CCVPGPPST	9	42	487.705957795373	973.3973626575461	2	487.7059020996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))C(Carbamidomethyl (C))VPGPPST_	REV__ENST00000609439.2_2_7:45808797-45808845:+|nuORF	35.200714571348534	0.47427825964483533	6				NaN	NaN	0	NaN	14765	5322	20088
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20301	52.152	NaN	1616.9	30	0	599.36	0.144			+	33642	RMHYGKIY	8	37	534.2766209088119	NaN	0	534.2765502929688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RMHYGKIY_	REV__tr|U7SJA1|U7SJA1_FUSNUXyloseisomerase-likeTIMbarreldomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02159PE=4SV=1	38.80614096846853	1.7418937515398478	6				NaN	NaN	0	NaN	14821	5478	20300
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	1954	10.271	NaN	853.19	30	0	174.03	0.145	+			20100	KEKKEEEKM	9	35	597.8058267009479	NaN	0	597.8054809570312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_KEKKEEEKM(Oxidation (M))_	ENSG00000173692|ENST00000308696|PSMD1;nc|ENSG00000173692|Q99460-2|PSMD1	58.2462437865262	0.1567987007793744	6				NaN	NaN	0	NaN	0	1952	1953
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	1990	10.435	NaN	683.77	30	0	176.77	0.214				-1	KVMKDAKTK	9	26	532.811279296875	NaN	0	532.811279296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_KVM(Oxidation (M))KDAKTK_	ENSG00000198900|ENST00000361337|TOP1	38.753607047826485	0.28190821760017076	6				NaN	NaN	0	NaN	6	1982	1989
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	1991	10.438	NaN	317.72	30	0	158.75	0.106			+	32092	QSFIFCYF	8	17	527.7409057617188	NaN	0	527.7409057617188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QSFIFCYF_	REV__tr|U7SNA1|U7SNA1_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01763PE=4SV=1	13.775330524044264	1.7418937515398478	6				NaN	NaN	0	NaN	7	1982	1989
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	1992	10.44	NaN	399.08	30	0	151.68	0.035			+	-1	QPLMQPMR	8	14	516.75048828125	NaN	0	516.75048828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Oxidation (M)	_QPLM(Oxidation (M))QPM(Oxidation (M))R_	REV__DISP1|p.E1470Gfs*5|1|0.31|ENSG00000154309|chr1:223005800-223005801|-/G|frameshift_variant;REV__DISP1|p.N862Tfs*64|1|0.45|ENSG00000154309|chr1:223003979-223003979|A/-|frameshift_variant;REV__DISP1|p.S1299Ffs*6|1|0.05|ENSG00000154309|chr1:223005292-223005293|-/TTTG|frameshift_variant;REV__ENSG00000154309|ENST00000675850|DISP1;REV__ENST00000482856.1_1_1:223116165-223116675:+|nuORF	19.359975847455235	1.7418937515398478	6				NaN	NaN	0	NaN	8	1982	1989
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2021	10.58	NaN	1806.7	30	0	701.85	0.144				-1	RCQKAMTAK	9	28	526.7713357696468	NaN	0	526.7717895507812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_RCQKAM(Oxidation (M))TAK_	ENSG00000126267|ENST00000649813|COX6B1	23.52269567125451	0.3573684076213556	6				NaN	NaN	0	NaN	10	2009	2020
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2051	10.803	NaN	1974.8	30	0	414.14	0.144	+			19513	KAVKKTPKKA	10	57	549.8715651643889	1097.7285773955778	2	550.3746337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAVKKTPKKA_	ENSG00000184357|ENST00000331442|H1-5	88.17693792209575	0.14151128060301246	6				NaN	NaN	0	NaN	16	2033	2050
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2060	10.835	NaN	3246.8	30	0	657.49	0.214	+			22292	KTDPSAAGRKK	11	60	579.833320873753	1157.652088814306	2	579.8352661132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTDPSAAGRKK_	ENSG00000183495|ENST00000389561|EP400;EP400|p.P2793Rfs*46|1|0.3|ENSG00000183495|chr12:132064707-132064707|C/-|frameshift_variant;nc|ENSG00000183495|Q96L91-3|EP400;nc|ENSG00000183495|Q96L91-4|EP400;nc|ENSG00000183495|Q96L91-5|EP400;nc|ENSG00000183495|Q96L91|EP400	106.15719557519877	0.04795798448229554	6				NaN	NaN	0	NaN	19	2039	2059
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2061	10.839	NaN	6121.3	30	0	2089.9	0.038	+			22293	KTDPSAAGRKK	11	41	386.89103867669223	1157.6512866302767	3	386.8911437988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTDPSAAGRKK_	ENSG00000183495|ENST00000389561|EP400;EP400|p.P2793Rfs*46|1|0.3|ENSG00000183495|chr12:132064707-132064707|C/-|frameshift_variant;nc|ENSG00000183495|Q96L91-3|EP400;nc|ENSG00000183495|Q96L91-4|EP400;nc|ENSG00000183495|Q96L91-5|EP400;nc|ENSG00000183495|Q96L91|EP400	41.080066990542036	0.5431644350485484	6				NaN	NaN	0	NaN	20	2039	2059
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2066	10.854	NaN	1696.6	30	0	503.87	0.144	+			19498	KATKSPAKPK	10	39	528.3325272689117	1054.6505016046233	2	528.3319091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KATKSPAKPK_	ENSG00000184357|ENST00000331442|H1-5	62.166158670854095	0.3461392669251714	6				NaN	NaN	0	NaN	22	2042	2065
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2093	10.98	NaN	1280.2	30	0	224.65	0.144	+			1850	AIKKNNPRK	9	35	534.8354196749376	1067.6562864166751	2	534.8362426757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AIKKNNPRK_	ENSG00000060138|ENST00000228251|YBX3;ENSG00000065978|ENST00000321358|YBX1;ENST00000542002.5_1_12:10853889-10868397:-|nuORF;nc|ENSG00000060138|P16989-2|YBX3;nc|ENSG00000060138|P16989-3|YBX3	56.72105179125745	0.24094814563026265	6				NaN	NaN	0	NaN	25	2066	2092
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2106	11.029	NaN	737.92	30	0	212.83	0.142	+			19492	KATGAATPKK	10	31	486.7953729313481	971.5761929294962	2	486.7957763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KATGAATPKK_	ENSG00000168298|ENST00000304218|H1-4	45.908116695636124	0.4947047446361497	6				NaN	NaN	0	NaN	29	2075	2105
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2132	11.13	NaN	1838.5	30	0	549.3	0.143				-1	 	0	41	513.3267586458844	512.3194821792844	1	513.3280029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	37	2093	2131
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2142	11.163	NaN	2950.1	30	0	1003.5	0.142	+			4516	ATKKPAPEK	9	53	485.2900577825191	968.5655626318382	2	485.29022216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATKKPAPEK_	ENSG00000174444|ENST00000307961|RPL4;ENST00000422486.1_1_3:185135285-185135612:-|nuORF;ENST00000567229.5_1_15:66791747-66793486:-|nuORF	85.16082228582465	0.07850854922700509	6				NaN	NaN	0	NaN	41	2099	2141
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2148	11.182	NaN	4972.3	30	0	1432.8	0.144			+	19412	KAPKASPAKK	10	46	342.55313664452217	1024.6375805337666	3	342.5537414550781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAPKASPAKK_	REV__ENSG00000155761|ENST00000336338|SPAG17;REV__SPAG17|p.L1608Ifs*4|1|0.34|ENSG00000155761|chr1:117996698-117996699|-/T|frameshift_variant;REV__SPAG17|p.Q1264Rfs*3|1|0.29|ENSG00000155761|chr1:118025357-118025357|G/-|frameshift_variant;REV__SPAG17|p.T1729Lfs*21|2|0.43|ENSG00000155761|chr1:117992642-117992642|T/-|frameshift_variant	27.047317107675042	0.6589519614906109	6				NaN	NaN	0	NaN	44	2102	2147
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2176	11.296	NaN	6410.1	30	0	2551.3	0.142	+			19216	KAAGAGKVTK	10	58	465.78981886065446	929.565084788109	2	465.7904357910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAAGAGKVTK_	ENSG00000156508|ENST00000309268|EEF1A1;ENST00000359165.5_1_12:19609181-19609565:-|nuORF;ENST00000436459.2_1_9:135895553-135896258:+|nuORF;ENST00000447052.1_1_21:24762753-24763314:+|nuORF;ENST00000547505.2_1_12:44054544-44054901:+|nuORF;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	204.78781133344324	1.6955929219748032E-06	6				NaN	NaN	0	NaN	51	2123	2175
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2186	11.33	NaN	914.84	30	0	304.2	0.143	+			3205	ASKKPLKEK	9	43	514.8270874023438	NaN	0	514.8270874023438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASKKPLKEK_	ENSG00000120029|ENST00000370033|ARMH3	46.45678178249821	0.2311111838007999	6				NaN	NaN	0	NaN	55	2129	2185
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2198	11.368	NaN	1360.2	30	0	388.45	0.143			+	47151	VLRKLEGPK	9	37	520.3347579375378	1038.6549629418755	2	520.33544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VLRKLEGPK_	REV__ENSG00000204599|ENST00000396551|TRIM39;REV__nc|ENSG00000204599|Q9HCM9|TRIM39	42.86426827375447	0.38666266728046506	6				NaN	NaN	0	NaN	61	2135	2197
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2203	11.384	NaN	1537.6	30	0	675.47	0.143			+	31639	QMQLVKKK	8	35	501.8093824377974	1001.6042119423948	2	501.80999755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QMQLVKKK_	REV__ENST00000320985.14_1_10:31750007-31791278:+|nuORF	57.81127852772723	0.5234495074909924	6				NaN	NaN	0	NaN	63	2138	2202
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2215	11.422	NaN	7553.9	30	0	2139.8	0.214	+			22903	KVMKDAKTK	9	65	524.8130660443086	1047.611579155417	2	524.81396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVMKDAKTK_	ENSG00000198900|ENST00000361337|TOP1	145.46060221211434	0.007927189773590037	6				NaN	NaN	0	NaN	69	2144	2214
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2216	11.426	NaN	2337.4	30	0	438.8	0.039			+	907	AEIDIEAKKAW	11	63	637.3420054995327	1272.6694580658652	2	637.3414916992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEIDIEAKKAW_	REV__CHD9|p.M2707Tfs*40|1|0.1|ENSG00000177200|chr16:53324320-53324321|-/C|frameshift_variant;REV__CHD9|p.N1798Tfs*17|1|0.12|ENSG00000177200|chr16:53292931-53292931|A/-|frameshift_variant;REV__CHD9|p.R2541Kfs*9|1|0.11|ENSG00000177200|chr16:53318242-53318243|-/A|frameshift_variant;REV__CHD9|p.R2632Dfs*28|1|0.35|ENSG00000177200|chr16:53324090-53324090|G/-|frameshift_variant;REV__ENSG00000177200|ENST00000447540|CHD9;REV__nc|ENSG00000177200|Q3L8U1-2|CHD9;REV__nc|ENSG00000177200|Q3L8U1-3|CHD9	42.86426827375447	0.5187511139693657	6				NaN	NaN	0	NaN	70	2144	2214
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2229	11.453	NaN	1999.9	30	0	677.78	0.214	+			22904	KVMKDAKTK	9	35	350.2111511230469	NaN	0	350.2111511230469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVMKDAKTK_	ENSG00000198900|ENST00000361337|TOP1	27.882242232435846	0.3367954786602879	6				NaN	NaN	0	NaN	80	2147	2228
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2230	11.457	NaN	324.41	30	0	99.548	0.106			+	32439	QVIKYRTY	8	24	535.8046875	NaN	0	535.8046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QVIKYRTY_	REV__ENSG00000136048|ENST00000258534|DRAM1;REV__nc|ENSG00000136048|Q8N682-2|DRAM1	47.657333605630114	1.7418937515398478	6				NaN	NaN	0	NaN	81	2147	2228
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2231	11.459	NaN	983.11	30	0	387.6	0.034	+			13770	GQGPRSPHK	9	32	482.2602233886719	NaN	0	482.2602233886719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GQGPRSPHK_	ENSG00000196943|ENST00000267425|NOP9;nc|ENSG00000196943|Q86U38-2|NOP9	31.529811441608018	0.3183796599642538	6				NaN	NaN	0	NaN	82	2147	2228
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2241	11.492	NaN	1662	30	0	842.86	0.143				-1	MRLLKSEL	8	24	516.301116934394	1030.587680935588	2	516.302490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))MRLLKSEL_	ENST00000389693.3_1_11:36397601-36484283:+|nuORF;nc|ENSG00000135362|Q6MZQ0-3|PRR5L	12.959181472943097	0.7887000251064199	6				NaN	NaN	0	NaN	86	2153	2240
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2253	11.531	NaN	3014.8	30	0	748.87	0.214			+	31408	QKLHELIA	8	53	476.28308602192584	950.5516191106517	2	476.28387451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QKLHELIA_	REV__ENSG00000185261|ENST00000682413|KIAA0825;REV__nc|ENSG00000185261|Q8IV33|KIAA0825	50.0245360154114	0.5941082100236891	6				NaN	NaN	0	NaN	92	2159	2252
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2254	11.535	NaN	708.41	30	0	275.5	0.036			+	37540	SLLSVDDKGQ	10	27	531.2794678029429	1060.5443826726857	2	531.2807006835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLLSVDDKGQ_	REV__ENSG00000103494|ENST00000647211|RPGRIP1L;REV__ENST00000568009.1_1_16:53669439-53672248:-|nuORF;REV__nc|ENSG00000103494|Q68CZ1-2|RPGRIP1L	24.519189625965996	0.6795976720565101	6				NaN	NaN	0	NaN	93	2159	2252
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2267	11.562	NaN	92235	30	0	63881	0.214	+			4847	ATPKKSIKK	9	61	500.82894214945503	999.6433313657101	2	500.8291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATPKKSIKK_	ENSG00000124575|ENST00000244534|H1-3	101.45984612302182	0.0377122763612125	6				NaN	NaN	0	NaN	103	2162	2266
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2268	11.566	NaN	2252.4	30	0	426.56	0.106	+			423	AATKKPAPEK	10	60	520.8084189864636	1039.6022850397271	2	520.80859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AATKKPAPEK_	ENSG00000174444|ENST00000307961|RPL4;ENST00000422486.1_1_3:185135285-185135612:-|nuORF;ENST00000567229.5_1_15:66791747-66793486:-|nuORF	99.01295224348159	0.08062808246117298	6				NaN	NaN	0	NaN	104	2162	2266
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2269	11.567	NaN	26806	30	0	17352	0.106	+			4848	ATPKKSIKK	9	44	334.22150134632136	999.6426746391642	3	334.2215881347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATPKKSIKK_	ENSG00000124575|ENST00000244534|H1-3	29.170058357718403	0.5306379469863586	6				NaN	NaN	0	NaN	105	2162	2266
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2270	11.569	NaN	22855	30	0	6629.5	0.035			+	32772	RARKARPK	8	70	328.21792121505507	981.6319342453653	3	328.21820068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RARKARPK_	REV__ENSG00000204851|ENST00000599531|PNMA8B	18.324413293986947	0.7971860551947066	6				NaN	NaN	0	NaN	106	2162	2266
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2281	11.595	NaN	5637.1	30	0	3006.6	0.214			+	47582	VRPGRRKPG	9	30	511.81984328743766	1021.6251336416753	2	511.8207702636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VRPGRRKPG_	REV__ENST00000483824.5_1_1:40420832-40434017:+|nuORF	12.206847966760668	0.6112419832031292	6				NaN	NaN	0	NaN	114	2165	2280
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2282	11.598	NaN	3059.7	30	0	980.23	0.106			+	1598	AGLKLAKK	8	44	414.78654473544833	827.5585365376967	2	414.786865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AGLKLAKK_	REV__ASS1|p.Q138Rfs*2|2|0.18|ENSG00000130707|chr9:130464154-130464154|C/-|frameshift_variant;REV__ENSG00000130707|ENST00000352480|ASS1	44.53106598305862	0.628196326904373	6				NaN	NaN	0	NaN	115	2165	2280
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2283	11.6	NaN	1432.7	30	0	365.86	0.106	+			208	AALLTLKRP	9	35	491.82389648931166	981.6332400454233	2	491.8243408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AALLTLKRP_	ENSG00000183378|ENST00000533663|OVCH2;nc|ENSG00000183378|Q7RTZ1|OVCH2;OVCH2|p.P513Lfs*3|1|0.31|ENSG00000183378|chr11:7691370-7691370|G/-|frameshift_variant;OVCH2|p.S358Ffs*6|1|0.34|ENSG00000183378|chr11:7696533-7696534|-/A|frameshift_variant	12.206847966760668	0.6112419832031292	6				NaN	NaN	0	NaN	116	2165	2280
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2284	11.602	NaN	1416.4	30	0	223.7	0.106				-1	GLLKECHNK	9	26	549.7891153901354	1097.5636778470707	2	549.7902221679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_GLLKEC(Carbamidomethyl (C))HNK_	DENND5A|p.R759H|1|0.27|ENSG00000184014|chr11:9165843-9165843|C/T|missense_variant	27.882242232435846	0.5426732730940306	6				NaN	NaN	0	NaN	117	2165	2280
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2285	11.604	NaN	1342.4	30	0	456.87	0.106			+	19698	KDRSLSKKR	9	22	559.3434182194151	1116.67228350563	2	559.3446044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KDRSLSKKR_	REV__ENSG00000275111|ENST00000614034|ZNF2;REV__nc|ENSG00000275111|Q9BSG1-3|ZNF2;REV__nc|ENSG00000275111|Q9BSG1-4|ZNF2;REV__ZNF2|p.F183Lfs*38|1|0.21|ENSG00000275111|chr2:95181372-95181372|T/-|frameshift_variant;REV__ZNF2|p.Y323Sfs*7|1|0.04|ENSG00000275111|chr2:95181795-95181796|-/CC|frameshift_variant	10.865556482863946	0.6112419832031292	6				NaN	NaN	0	NaN	118	2165	2280
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2286	11.605	NaN	1478.1	30	0	589.76	0.037				-1	KKQVLTLCK	9	25	373.23171510668584	NaN	0	373.23150634765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_KKQVLTLC(Carbamidomethyl (C))K_	ENST00000436852.2_1_X:121673097-121673310:+|nuORF	27.882242232435846	0.3367954786602879	6				NaN	NaN	0	NaN	119	2165	2280
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2287	11.606	NaN	474.93	30	0	170.01	0.139			+	29961	PNNLLLKK	8	22	470.30267333984375	NaN	0	470.30267333984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PNNLLLKK_	REV__tr|U7SRG1|U7SRG1_FUSNUPhosphateacetyltransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01589PE=3SV=1	19.359975847455235	1.7418937515398478	6				NaN	NaN	0	NaN	120	2165	2280
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2299	11.633	NaN	992.45	30	0	242.73	0.214	+			21215	KLFQKRGR	8	37	516.8243408203125	NaN	0	516.8243408203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KLFQKRGR_	ENSG00000126870|ENST00000407559|DYNC2I1;ENST00000467220.1_1_7:158683991-158695375:+|nuORF	50.0245360154114	1.7418937515398478	6				NaN	NaN	0	NaN	129	2168	2298
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2300	11.637	NaN	9483.1	30	0	1993.7	0.036				-1	 	0	49	357.2080640280313	1068.602362684294	3	357.20849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	130	2168	2298
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2309	11.657	NaN	1842.2	30	0	437.74	0.214	+			42889	TEHAKRKTV	9	38	535.3101196289062	NaN	0	535.3101196289062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEHAKRKTV_	ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000275663|ENST00000611444|H4C7;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2	24.519189625965996	0.35377483217337163	6				NaN	NaN	0	NaN	136	2171	2308
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2310	11.661	NaN	675.05	30	0	125.88	0.034			+	37199	SKDTKLGSK	9	35	482.277254871159	NaN	0	482.2770690917969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SKDTKLGSK_	REV__ADRA1A|p.D228N|1|0.13|ENSG00000120907|chr8:26864288-26864288|C/T|missense_variant;REV__ENSG00000120907|ENST00000380573|ADRA1A;REV__nc|ENSG00000120907|P35348-2|ADRA1A;REV__nc|ENSG00000120907|P35348-3|ADRA1A;REV__nc|ENSG00000120907|P35348-4|ADRA1A;REV__nc|ENSG00000120907|P35348-5|ADRA1A;REV__nc|ENSG00000120907|P35348-6|ADRA1A;REV__nc|ENSG00000120907|P35348-7|ADRA1A;REV__nc|ENSG00000120907|P35348-8|ADRA1A;REV__nc|ENSG00000120907|P35348-9|ADRA1A	17.468008924990375	0.37786057458515737	6				NaN	NaN	0	NaN	137	2171	2308
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2317	11.679	NaN	4222.9	30	0	740.34	0.144	+			34215	RTEDHPCQK	9	51	557.259372731182	1112.504192529164	2	557.2606811523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTEDHPCQK_	ENSG00000105258|ENST00000221859|POLR2I;ENST00000586439.1_1_19:36604659-36605969:-|nuORF;ENST00000589591.5_1_19:36604659-36605638:-|nuORF	109.43880257439609	0.029570636687953285	6				NaN	NaN	0	NaN	141	2174	2316
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2328	11.714	NaN	971.58	30	0	159.46	0.142	+			19441	KAQTKAPPK	9	37	484.7981850939696	NaN	0	484.7985534667969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAQTKAPPK_	ENSG00000166197|ENST00000605788|NOLC1;nc|ENSG00000166197|Q14978-2|NOLC1;nc|ENSG00000166197|Q14978-3|NOLC1	52.936696900407355	0.1864545979552969	6				NaN	NaN	0	NaN	146	2180	2327
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2344	11.758	NaN	3351	30	0	731.85	0.214	+			34345	RTQDLKTKK	9	53	559.3383474939033	1116.6621420546064	2	559.3386840820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTQDLKTKK_	BMS1|p.L617Afs*20|1|0.26|ENSG00000165733|chr10:42797085-42797086|-/A|frameshift_variant;ENSG00000165733|ENST00000374518|BMS1;ENST00000399449.3_1_10:75487125-75488312:-|nuORF;ENST00000453174.7_2_10:81666360-81667538:+|nuORF	75.04331003522576	0.118981335847003	6				NaN	NaN	0	NaN	156	2186	2343
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2345	11.762	NaN	1006.1	30	0	165.53	0.034	+			30821	QEEKSRVA	8	42	473.7514343261719	NaN	0	473.7514343261719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QEEKSRVA_	ENST00000342922.8_1_11:47290950-47291097:+|nuORF	63.30626980617807	1.7418937515398478	6				NaN	NaN	0	NaN	157	2186	2343
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2350	11.777	NaN	2725.1	30	0	525.64	0.144	+			4106	ATDTRVRQK	9	36	358.87198076878934	NaN	0	358.8719177246094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATDTRVRQK_	ENSG00000168116|ENST00000370733|KIAA1586;nc|ENSG00000168116|Q9HCI6-2|KIAA1586	58.78195531508484	0.1545138866451181	6				NaN	NaN	0	NaN	159	2189	2349
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2354	11.794	NaN	4417.6	30	0	1324.7	0.214	+			3514	ASSKDAIKK	9	55	474.27894468171354	946.5433364302271	2	474.2798767089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASSKDAIKK_	DSTN|p.Y117H|1|0.26|ENSG00000125868|chr20:17604592-17604592|T/C|missense_variant;ENSG00000125868|ENST00000246069|DSTN;ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000400899.2_1_1:11051144-11051557:-|nuORF;ENST00000530945.1_1_11:65623104-65623215:-|nuORF;nc|ENSG00000125868|P60981-2|DSTN;nc|ENSG00000165410|Q9Y281-3|CFL2	109.47833844074708	0.029530294723441826	6				NaN	NaN	0	NaN	160	2192	2353
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2355	11.798	NaN	2638.4	30	0	744.42	0.106	+			38391	SRVLSGASQK	10	55	516.7928311177108	1031.5711093022214	2	516.7933349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SRVLSGASQK_	ENSG00000131828|ENST00000422285|PDHA1;ENST00000492364.1_1_X:19362065-19369554:+|nuORF;nc|ENSG00000131828|P08559-2|PDHA1;nc|ENSG00000131828|P08559-3|PDHA1;nc|ENSG00000131828|P08559-4|PDHA1	49.536043120802724	0.461275219792494	6				NaN	NaN	0	NaN	161	2192	2353
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2356	11.799	NaN	1138.4	30	0	245.09	0.036			+	41162	SVKKKWEDS	9	41	553.7942697106394	NaN	0	553.7952270507812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVKKKWEDS_	REV__ENST00000533006.1_1_1:74663962-74715145:+|nuORF;REV__nc|ENSG00000116783|Q59H18-1|TNNI3K;REV__nc|ENSG00000116783|Q59H18-3|TNNI3K;REV__nc|ENSG00000116783|Q59H18-4|TNNI3K	25.57405402267927	0.3484490411150625	6				NaN	NaN	0	NaN	162	2192	2353
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2366	11.821	NaN	6512.6	30	0	2063.6	0.214	+			32178	QSSHRRKA	8	60	485.2699652526242	968.5253775720485	2	485.2705383300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QSSHRRKA_	ENSG00000173480|ENST00000312026|ZNF417;ENSG00000198466|ENST00000339656|ZNF587;nc|ENSG00000173480|Q8TAU3-2|ZNF417;nc|ENSG00000198466|Q96SQ5-2|ZNF587	44.116797842482775	0.6307669463330267	6				NaN	NaN	0	NaN	169	2195	2365
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2367	11.825	NaN	517.68	30	0	266.83	0.106			+	19227	KAAKDETAK	9	22	481.26910400390625	NaN	0	481.26910400390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KAAKDETAK_	REV__ENSG00000100285|ENST00000310624|NEFH;REV__nc|ENSG00000100285|P12036-2|NEFH	19.996771675451527	0.3693019437812985	6				NaN	NaN	0	NaN	170	2195	2365
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2368	11.827	NaN	532.1	30	0	139.69	0.035			+	13896	GRGFDSLNR	9	20	511.263671875	NaN	0	511.263671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GRGFDSLNR_	REV__ENST00000494624.1_1_X:100872054-100872120:-|nuORF	19.1035232394073	0.3723251548669699	6				NaN	NaN	0	NaN	171	2195	2365
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2380	11.852	NaN	223250	30	0	54327	0.214			+	21106	KKQTNKKK	8	96	501.824466922787	NaN	0	501.8243713378906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KKQTNKKK_	REV__ENST00000395442.5_1_10:55568369-55568990:-|nuORF	152.47061609516894	1.4131531093421528	6				NaN	NaN	0	NaN	180	2198	2379
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2381	11.855	NaN	24543	30	0	4033.8	0.106	+			38686	SSKDAIKK	8	67	438.7605370261492	875.5065211190985	2	438.7607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSKDAIKK_	DSTN|p.Y117H|1|0.26|ENSG00000125868|chr20:17604592-17604592|T/C|missense_variant;ENSG00000125868|ENST00000246069|DSTN;ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000400899.2_1_1:11051144-11051557:-|nuORF;ENST00000530945.1_1_11:65623104-65623215:-|nuORF;ENST00000602547.1_1_12:6994092-6994545:+|nuORF;nc|ENSG00000125868|P60981-2|DSTN;nc|ENSG00000165410|Q9Y281-3|CFL2	145.15565482312357	0.2770951602874112	6				NaN	NaN	0	NaN	181	2198	2379
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2382	11.857	NaN	9408.6	30	0	4130.9	0.106	+			15609	GVKFVKSFI	9	62	512.8156680966315	NaN	0	512.8153076171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GVKFVKSFI_	ENSG00000206384|ENST00000358511|COL6A6	45.9519527083369	0.2345902329052062	6				NaN	NaN	0	NaN	182	2198	2379
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2383	11.859	NaN	4065.6	30	0	2196.5	0.106			+	31918	QQLNLNQQ	8	31	493.2573095279286	NaN	0	493.2572937011719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QQLNLNQQ_	REV__ENSG00000143190|ENST00000367866|POU2F1;REV__ENST00000470928.3_1_1:167334720-167353117:+|nuORF;REV__ENST00000560232.6_1_1:167301714-167356435:+|nuORF;REV__nc|ENSG00000143190|P14859-2|POU2F1;REV__nc|ENSG00000143190|P14859-3|POU2F1;REV__nc|ENSG00000143190|P14859-4|POU2F1;REV__nc|ENSG00000143190|P14859-5|POU2F1;REV__nc|ENSG00000143190|P14859|POU2F1;REV__POU2F1|p.F454Sfs*15|1|0.64|ENSG00000143190|chr1:167399343-167399343|T/-|frameshift_variant;REV__POU2F1|p.Q547Rfs*16|1|0.43|ENSG00000143190|chr1:167412111-167412111|C/-|frameshift_variant	30.503639358989545	1.7418937515398478	6				NaN	NaN	0	NaN	183	2198	2379
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2384	11.861	NaN	1061.9	30	0	313.33	0.106			+	34774	RYIGALPKGQ	10	43	551.8241577148438	NaN	0	551.8241577148438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RYIGALPKGQ_	REV__ENSG00000183955|ENST00000402868|KMT5A;REV__ENST00000413684.1_1_2:91935968-91936997:-|nuORF;REV__ENST00000437519.5_1_12:123868737-123892247:+|nuORF;REV__nc|ENSG00000183955|Q9NQR1|KMT5A	21.9598887501803	0.4201028297492154	6				NaN	NaN	0	NaN	184	2198	2379
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2385	11.863	NaN	16881	30	0	4418.3	0.106	+			22170	KSSGGLLK	8	68	395.24467383161243	788.4747947300249	2	395.2452392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KSSGGLLK_	nc|ENSG00000124780|Q96T54-4|KCNK17	87.75429964447693	0.2842685068779738	6				NaN	NaN	0	NaN	185	2198	2379
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2386	11.865	NaN	9940.5	30	0	2774.5	0.033	+			12164	GALASVLAGQ	10	59	443.7528695985883	885.4911862639766	2	443.75323486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GALASVLAGQ_	ENSG00000275074|ENST00000611621|NUDT18;NUDT18|p.S70Rfs*23|1|0.22|ENSG00000275074|chr8:22108302-22108302|C/-|frameshift_variant	93.19546047674547	0.11277922692270353	6				NaN	NaN	0	NaN	186	2198	2379
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2408	11.913	NaN	885.97	30	0	197.01	0.142				-1	MLPVISTR	8	40	466.76740655772727	931.5202601822546	2	466.766845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))LPVISTR_	ENSG00000150893|ENST00000280481|FREM2;nc|ENSG00000150893|Q5SZK8-2|FREM2	44.116797842482775	0.6307669463330267	6				NaN	NaN	0	NaN	202	2204	2407
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2423	11.944	NaN	91460	30	0	34693	0.214				-1	 	0	77	450.286600932374	898.558648931548	2	450.2870178222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	214	2207	2422
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2424	11.948	NaN	42392	30	0	6309.9	0.106				-1	 	0	72	481.2559253379539	960.4972977427078	2	481.2562561035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	215	2207	2422
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2425	11.95	NaN	1630.6	30	0	822.05	0.106			+	-1	SVPCKSLIA	9	26	325.5172119140625	NaN	0	325.5172119140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SVPC(Carbamidomethyl (C))KSLIA_	REV__nc|ENSG00000133401|O15018-2|PDZD2	14.864876125193954	0.3866709117995958	6				NaN	NaN	0	NaN	216	2207	2422
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2426	11.951	NaN	1217.6	30	0	503.82	0.106	+			29825	PKRRQVEQ	8	20	520.7996045778128	1039.5846562224256	2	520.7996215820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PKRRQVEQ_	ENSG00000255251|ENST00000533250|PRR23D1;ENSG00000255378|ENST00000528972|PRR23D2	8.231297230196988	0.7812220690224883	6				NaN	NaN	0	NaN	217	2207	2422
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2427	11.953	NaN	3983.6	30	0	2094	0.106	+			25283	LNSHLLPK	8	53	461.2780720405303	NaN	0	461.2782287597656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LNSHLLPK_	ENSG00000156006|ENST00000286479|NAT2	39.252832667884924	1.7418937515398478	6				NaN	NaN	0	NaN	218	2207	2422
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2428	11.955	NaN	1109.5	30	0	212.9	0.035			+	-1	KLMGQGRW	8	48	496.2615638801459	NaN	0	496.26177978515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_KLM(Oxidation (M))GQGRW_	REV__ENST00000481424.5_1_7:99217223-99217685:+|nuORF	26.79610172149135	1.7418937515398478	6				NaN	NaN	0	NaN	219	2207	2422
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2429	11.956	NaN	2394.5	30	0	885.43	0.144			+	11373	FLKPLRPTQ	9	30	367.22395169718095	1098.650025691743	3	367.5587158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FLKPLRPTQ_	REV__CNBD1|p.K78T|1|0.19|ENSG00000176571|chr8:86905155-86905155|A/C|missense_variant	39.252832667884924	0.4290233611298554	6				NaN	NaN	0	NaN	220	2207	2422
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2447	11.993	NaN	3531.2	30	0	958.63	0.214	+			14658	GTIAKSGTK	9	48	431.75320787165947	NaN	0	431.7532043457031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTIAKSGTK_	ENSG00000080824|ENST00000216281|HSP90AA1;ENSG00000096384|ENST00000371646|HSP90AB1;HSP90AA1|p.K419Nfs*3|1|0.25|ENSG00000080824|chr14:102083874-102083874|T/-|frameshift_variant;HSP90AA1|p.S330Qfs*48|1|0.21|ENSG00000080824|chr14:102084558-102084558|A/-|frameshift_variant;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000224411|Q14568|HSP90AA2P	98.58198989935565	0.02429614701295995	6				NaN	NaN	0	NaN	235	2210	2446
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2448	11.997	NaN	1152.4	30	0	319.73	0.106	+			15713	GVQFGCSAPK	10	44	497.24261474609375	NaN	0	497.24261474609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GVQFGCSAPK_	ENST00000578711.1_1_17:7126890-7127154:+|nuORF	42.86426827375447	0.3507156137006061	6				NaN	NaN	0	NaN	236	2210	2446
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2449	11.999	NaN	2731.7	30	0	646.45	0.106	+			34344	RTQDHKIAK	9	48	548.8154907226562	NaN	0	548.8154907226562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RTQDHKIAK_	CIZ1|p.T876Hfs*5|1|0.4|ENSG00000148337|chr9:128166268-128166268|T/-|frameshift_variant;ENSG00000148337|ENST00000372938|CIZ1;nc|ENSG00000148337|Q9ULV3-2|CIZ1;nc|ENSG00000148337|Q9ULV3-3|CIZ1;nc|ENSG00000148337|Q9ULV3-4|CIZ1;nc|ENSG00000148337|Q9ULV3-5|CIZ1	82.7504851949679	0.061958946529908215	6				NaN	NaN	0	NaN	237	2210	2446
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2450	12.001	NaN	1520	30	0	389.24	0.106			+	38777	SSMAPGPA	8	23	359.1648864746094	NaN	0	359.1648864746094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSMAPGPA_	REV__ENST00000467891.5_1_22:50699812-50700103:-|nuORF	29.841539824830324	1.7418937515398478	6				NaN	NaN	0	NaN	238	2210	2446
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2451	12.003	NaN	6322.8	30	0	2751.9	0.106			+	21069	KKLNHSAK	8	45	463.28174594856114	924.5489389639223	2	463.2821350097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KKLNHSAK_	REV__ENSG00000165617|ENST00000395153|DACT1;REV__nc|ENSG00000165617|Q9NYF0|DACT1	60.97194046774394	0.49215940876911696	6				NaN	NaN	0	NaN	239	2210	2446
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2452	12.004	NaN	2044.5	30	0	774.23	0.037			+	16981	HPRGFLEIK	9	28	366.21197509765625	NaN	0	366.21197509765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HPRGFLEIK_	REV__ENSG00000165819|ENST00000298717|METTL3	25.57405402267927	0.3484490411150625	6				NaN	NaN	0	NaN	240	2210	2446
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2453	12.005	NaN	1089.1	30	0	269.17	0.139				-1	 	0	36	478.2997615768791	954.5849702205583	2	478.3002014160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	241	2210	2446
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2468	12.038	NaN	1771.9	30	0	138.33	0.214	+			13037	GEVSHPRKT	9	45	505.7724914550781	NaN	0	505.7724914550781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEVSHPRKT_	ENSG00000145192|ENST00000411641|AHSG	41.42661286455405	0.26577678759562784	6				NaN	NaN	0	NaN	253	2213	2467
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2469	12.041	NaN	551.54	30	0	86.521	0.106			+	20361	KESKTVAEKA	10	32	545.8093872070312	NaN	0	545.8093872070312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KESKTVAEKA_	REV__ENSG00000131018|ENST00000367255|SYNE1;REV__ENST00000471834.1_1_6:152657861-152688565:-|nuORF;REV__nc|ENSG00000131018|Q8NF91-4|SYNE1;REV__nc|ENSG00000131018|Q8NF91-7|SYNE1;REV__SYNE1|p.A3854Lfs*20|1|0.4|ENSG00000131018|chr6:152352048-152352048|T/-|frameshift_variant;REV__SYNE1|p.E4738Kfs*25|1|0.12|ENSG00000131018|chr6:152330474-152330474|T/-|frameshift_variant;REV__SYNE1|p.E5862Gfs*83|1|0.12|ENSG00000131018|chr6:152300729-152300738|CCAGACTCCT/-|frameshift_variant;REV__SYNE1|p.G6773Wfs*7|1|0.44|ENSG00000131018|chr6:152236186-152236187|-/A|frameshift_variant;REV__SYNE1|p.K3606Sfs*5|1|0.25|ENSG00000131018|chr6:152354768-152354768|T/-|frameshift_variant;REV__SYNE1|p.K6871Rfs*22|2|0.52|ENSG00000131018|chr6:152233881-152233881|T/-|frameshift_variant;REV__SYNE1|p.L3490I|1|0.1|ENSG00000131018|chr6:152358513-152358513|G/T|missense_variant;REV__SYNE1|p.L8283Pfs*8|1|0.19|ENSG00000131018|chr6:152148173-152148174|-/G|frameshift_variant;REV__SYNE1|p.M5602Nfs*13|2|0.32|ENSG00000131018|chr6:152310779-152310780|-/T|frameshift_variant;REV__SYNE1|p.V8635Sfs*12|1|0.15|ENSG00000131018|chr6:152133375-152133375|T/-|frameshift_variant	27.047317107675042	0.41136583337917604	6				NaN	NaN	0	NaN	254	2213	2467
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2470	12.043	NaN	801.87	30	0	125.02	0.036	+			22087	KSLTSWLTQ	9	33	532.2947387695312	NaN	0	532.2947387695312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KSLTSWLTQ_	FPR2|p.K276Nfs*40|1|0.04|ENSG00000171049|chr19:51769485-51769486|-/CAATG|frameshift_variant	27.047317107675042	0.34101084205454363	6				NaN	NaN	0	NaN	255	2213	2467
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2483	12.07	NaN	13300	30	0	1481.1	0.214	+			38995	SSSEPVHAKK	10	80	535.2849802760538	1068.5554076189076	2	535.285400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSSEPVHAKK_	ENSG00000173145|ENST00000371361|NOC3L;NOC3L|p.K235Nfs*2|1|0.43|ENSG00000173145|chr10:94353049-94353049|T/-|frameshift_variant;NOC3L|p.L425Yfs*3|1|0.14|ENSG00000173145|chr10:94346540-94346540|A/-|frameshift_variant;NOC3L|p.T423Hfs*5|1|0.09|ENSG00000173145|chr10:94346547-94346547|T/-|frameshift_variant	120.27252224102466	0.026944837168485097	6				NaN	NaN	0	NaN	265	2216	2482
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2484	12.074	NaN	5715.5	30	0	1420.6	0.106	+			20098	KEKKEEEKM	9	61	589.8076916571902	1177.6008303811802	2	589.8081665039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEKKEEEKM_	ENSG00000173692|ENST00000308696|PSMD1;nc|ENSG00000173692|Q99460-2|PSMD1	156.16072019525166	0.005433163824165674	6				NaN	NaN	0	NaN	266	2216	2482
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2485	12.076	NaN	15897	30	0	3128.5	0.106			+	38744	SSLPRGVPQE	10	56	357.1921089528563	1068.554497458769	3	357.1925048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSLPRGVPQE_	REV__ENSG00000180818|ENST00000303460|HOXC10;REV__HOXC10|p.K203Qfs*11|1|0.28|ENSG00000180818|chr12:53985860-53985861|-/C|frameshift_variant;REV__HOXC10|p.S210Qfs*4|1|0.28|ENSG00000180818|chr12:53985881-53985882|-/C|frameshift_variant	47.95952297671804	0.47580206326914537	6				NaN	NaN	0	NaN	267	2216	2482
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2486	12.078	NaN	663.66	30	0	215.46	0.106			+	25719	LRQTKQEK	8	26	515.8031728339906	1029.5917927347812	2	516.2952880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LRQTKQEK_	REV__ENSG00000143393|ENST00000368873|PI4KB;REV__nc|ENSG00000143393|Q9UBF8-2|PI4KB;REV__nc|ENSG00000143393|Q9UBF8-3|PI4KB	21.9598887501803	0.7897753010812679	6				NaN	NaN	0	NaN	268	2216	2482
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2487	12.08	NaN	2366.7	30	0	392.5	0.106	+			38277	SQQGKPLRK	9	51	521.3110387662283	1040.6075245992565	2	521.3114624023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SQQGKPLRK_	ENSG00000116266|ENST00000370008|STXBP3;STXBP3|p.N527Kfs*17|1|0.2|ENSG00000116266|chr1:108807439-108807440|-/A|frameshift_variant;STXBP3|p.V566Lfs*3|1|0.52|ENSG00000116266|chr1:108808792-108808793|-/TT|frameshift_variant	65.15724298150197	0.17062369902793603	6				NaN	NaN	0	NaN	269	2216	2482
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2488	12.081	NaN	602.93	30	0	192.13	0.036			+	25064	LLLEVPDQR	9	29	541.8132934570312	NaN	0	541.8132934570312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LLLEVPDQR_	REV__ENSG00000134780|ENST00000257215|DAGLA	14.864876125193954	0.3866709117995958	6				NaN	NaN	0	NaN	270	2216	2482
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2489	12.082	NaN	584.05	30	0	72.525	0.139			+	39144	SSVGTRILK	9	36	480.7948303222656	NaN	0	480.7948303222656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSVGTRILK_	REV__ENSG00000165164|ENST00000378653|CFAP47	30.317721548370564	0.32449924987115025	6				NaN	NaN	0	NaN	271	2216	2482
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2504	12.115	NaN	2970.7	30	0	357.89	0.214			+	19965	KEGTHKRQ	8	54	492.2721842070624	982.5298154809249	2	492.2726745605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEGTHKRQ_	REV__ENSG00000175395|ENST00000302609|ZNF25;REV__ENSG00000175395|ENST00000302609|ZNF25;REV__ENSG00000197162|ENST00000395216|ZNF785;REV__nc|ENSG00000175395|P17030-2|ZNF25;REV__nc|ENSG00000175395|P17030-2|ZNF25;REV__nc|ENSG00000197162|A8K8V0-2|ZNF785	60.11826168202944	0.5006107059937851	6				NaN	NaN	0	NaN	283	2219	2503
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2505	12.119	NaN	9932.7	30	0	1202.5	0.106	+			21637	KPSSSSRKN	9	61	495.769313388385	989.52407384357	2	495.77008056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KPSSSSRKN_	CNTNAP2|p.H1113Pfs*52|1|0.35|ENSG00000174469|chr7:148229731-148229732|-/C|frameshift_variant;CNTNAP2|p.W833Gfs*18|1|0.41|ENSG00000174469|chr7:148118226-148118226|C/-|frameshift_variant;ENSG00000174469|ENST00000361727|CNTNAP2	68.78682469695295	0.14603441672067394	6				NaN	NaN	0	NaN	284	2219	2503
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2506	12.121	NaN	1535.3	30	0	335.89	0.106	+			20767	KHLATQTP	8	41	448.25347900390625	NaN	0	448.25347900390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KHLATQTP_	SUPT5H|p.P800Hfs*154|1|0.21|ENSG00000196235|chr19:39473425-39473425|C/-|frameshift_variant	57.81127852772723	1.7418937515398478	6				NaN	NaN	0	NaN	285	2219	2503
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2507	12.123	NaN	857.85	30	0	136.73	0.106			+	29067	NTIQPFPFQ	9	40	546.2772827148438	NaN	0	546.2772827148438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NTIQPFPFQ_	REV__DST|p.K5076Nfs*24|1|0.31|ENSG00000151914|chr6:56472218-56472218|T/-|frameshift_variant;REV__DST|p.T4428Nfs*23|1|0.12|ENSG00000151914|chr6:56497896-56497897|-/T|frameshift_variant;REV__ENSG00000151914|ENST00000680361|DST;REV__nc|ENSG00000151914|Q03001-9|DST;REV__nc|ENSG00000151914|Q03001|DST	34.172542307311794	0.30503706118289736	6				NaN	NaN	0	NaN	286	2219	2503
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2508	12.125	NaN	1977.7	30	0	297.42	0.106			+	25131	LLRATPRSQ	9	34	347.87642996107024	1040.6074604834107	3	347.876708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LLRATPRSQ_	REV__ENSG00000204839|ENST00000398882|MROH6	26.69291269510374	0.5537881896960711	6				NaN	NaN	0	NaN	287	2219	2503
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2509	12.126	NaN	886.03	30	0	297.61	0.036			+	-1	GVYVIMPEK	9	28	351.1890563964844	NaN	0	351.1890563964844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_GVYVIM(Oxidation (M))PEK_	REV__ENSG00000080007|ENST00000370336|DDX43	20.94693142431847	0.3660861156085067	6				NaN	NaN	0	NaN	288	2219	2503
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2510	12.127	NaN	2687.5	30	0	368.31	0.141	+			33042	REKEGDKPSA	10	51	558.7853619177296	1115.556170902259	2	558.7858276367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_REKEGDKPSA_	ENSG00000104904|ENST00000602676|OAZ1;ENST00000592787.2_1_19:2269573-2271441:+|nuORF	61.691277971877994	0.35045824941635534	6				NaN	NaN	0	NaN	289	2219	2503
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2524	12.158	NaN	28052	30	0	4120.7	0.214	+			3474	ASSATQVHK	9	79	464.7457540267029	NaN	0	464.7457275390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASSATQVHK_	ENST00000361272.8_2_8:17102747-17104366:-|nuORF	146.78539889680295	0.0014292327921901949	6				NaN	NaN	0	NaN	300	2222	2523
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2525	12.162	NaN	35036	30	0	10829	0.106	+			22612	KTTQDVKK	8	83	474.27894468171354	946.5433364302271	2	474.27935791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTTQDVKK_	CCNE2|p.R42Efs*38|1|0.07|ENSG00000175305|chr8:94893932-94893932|T/-|frameshift_variant;ENSG00000175305|ENST00000308108|CCNE2;ENST00000517487.5_1_8:95906073-95906449:-|nuORF;nc|ENSG00000175305|O96020-2|CCNE2	124.08010499294276	0.22872207833199332	6				NaN	NaN	0	NaN	301	2222	2523
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2526	12.164	NaN	443.03	30	0	38.205	0.106	+			9552	ELERLRSK	8	32	515.8040771484375	NaN	0	515.8040771484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ELERLRSK_	KTN1|p.E1195K|1|0.21|ENSG00000126777|chr14:55672681-55672681|G/A|missense_variant	24.519189625965996	1.7418937515398478	6				NaN	NaN	0	NaN	302	2222	2523
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2527	12.166	NaN	691.82	30	0	173.67	0.106			+	9179	EGPTNLAR	8	31	429.2270812988281	NaN	0	429.2270812988281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EGPTNLAR_	REV__nc|ENSG00000293543|Q6B8I1-4|DUSP13A	37.15910966729921	1.7418937515398478	6				NaN	NaN	0	NaN	303	2222	2523
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2528	12.168	NaN	711.87	30	0	118.29	0.106			+	15262	GTTHGIGK	8	30	385.711181640625	NaN	0	385.711181640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTTHGIGK_	REV__ENSG00000171497|ENST00000307720|PPID;REV__PPID|p.I134Yfs*21|1|0.34|ENSG00000171497|chr4:158717134-158717135|-/A|frameshift_variant	38.80614096846853	1.7418937515398478	6				NaN	NaN	0	NaN	304	2222	2523
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2529	12.169	NaN	1371.6	30	0	168.73	0.036			+	21063	KKLFDPNSK	9	38	359.5401611328125	NaN	0	359.5401611328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KKLFDPNSK_	REV__ENSG00000133030|ENST00000651222|MPRIP;REV__nc|ENSG00000133030|Q6WCQ1-2|MPRIP;REV__nc|ENSG00000133030|Q6WCQ1-3|MPRIP;REV__nc|ENSG00000133030|Q6WCQ1|MPRIP	32.75053402867276	0.3122164853807509	6				NaN	NaN	0	NaN	305	2222	2523
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2530	12.17	NaN	5087.6	30	0	993.13	0.14	+			4102	ATDRSHYAK	9	56	524.7619264565408	1047.5092999798815	2	524.7610473632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATDRSHYAK_	ENSG00000120265|ENST00000464889|PCMT1;nc|ENSG00000120265|P22061-2|PCMT1	42.86426827375447	0.38666266728046506	6				NaN	NaN	0	NaN	306	2222	2523
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2543	12.199	NaN	5272	30	0	1408.3	0.214	+			21134	KKSQKKKQ	8	57	501.824466922787	NaN	0	501.8244934082031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KKSQKKKQ_	ENSG00000176208|ENST00000321990|ATAD5	101.60071028292904	1.7418937515398478	6				NaN	NaN	0	NaN	316	2225	2542
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2544	12.203	NaN	1264.2	30	0	277.33	0.106	+			32413	QVFLVEIE	8	44	488.77101651795084	975.5274801027017	2	488.7715148925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QVFLVEIE_	ENSG00000124257|ENST00000372518|NEURL2;NEURL2|p.C195Afs*63|1|0.37|ENSG00000124257|chr20:45890409-45890409|A/-|frameshift_variant	44.116797842482775	0.6307669463330267	6				NaN	NaN	0	NaN	317	2225	2542
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2545	12.205	NaN	4907.2	30	0	1071.6	0.106	+			7645	DKPGDIIRE	9	55	521.7795833215133	1041.5446137098265	2	521.7799072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DKPGDIIRE_	ENST00000361337.2_1_20:39751926-39752103:+|nuORF	39.252832667884924	0.4290233611298554	6				NaN	NaN	0	NaN	318	2225	2542
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2546	12.206	NaN	3175.4	30	0	506.95	0.036			+	-1	GDPLWSMVK	9	38	350.1772386023549	NaN	0	350.17730712890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_GDPLWSM(Oxidation (M))VK_	REV__ENST00000508978.1_1_5:98115639-98134278:+|nuORF	54.776311868738084	0.17377682019723872	6				NaN	NaN	0	NaN	319	2225	2542
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2556	12.23	NaN	2436.4	30	0	843.1	0.214	+			15185	GTSKSSELKK	10	50	532.8016230119216	NaN	0	532.8023071289062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTSKSSELKK_	CCDC92|p.I268Sfs*40|1|0.29|ENSG00000119242|chr12:123937253-123937253|G/-|frameshift_variant;CCDC92|p.S183Afs*24|1|0.43|ENSG00000119242|chr12:123937508-123937508|C/-|frameshift_variant;ENSG00000119242|ENST00000238156|CCDC92;nc|ENSG00000119242|Q53HC0-2|CCDC92	56.43379154798735	0.2634004003759929	6				NaN	NaN	0	NaN	326	2228	2555
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2557	12.233	NaN	839.91	30	0	265.84	0.034	+			17976	IHCIVWAK	8	27	485.2699652526242	968.5253775720485	2	485.270263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IHCIVWAK_	ENSG00000126261|ENST00000246548|UBA2;nc|ENSG00000126261|Q9UBT2-2|UBA2	23.036711822280957	0.7814608874307191	6				NaN	NaN	0	NaN	327	2228	2555
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2568	12.259	NaN	21665	30	0	7372.7	0.214	+			3085	ASGEGHHLK	9	69	468.23782020114237	934.4610874690848	2	468.23822021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASGEGHHLK_	ENSG00000131771|ENST00000254079|PPP1R1B;ENST00000580772.1_1_17:37785452-37786437:+|nuORF;nc|ENSG00000131771|Q9UD71-2|PPP1R1B;PPP1R1B|p.N97Rfs*45|1|0.46|ENSG00000131771|chr17:39633928-39633931|TGAA/-|frameshift_variant	148.98678547993487	0.0071052929883181565	6				NaN	NaN	0	NaN	335	2231	2567
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2569	12.262	NaN	1603.6	30	0	134.98	0.106			+	29954	PNESCNGPVHS	11	36	570.7398602708938	1139.4651676085875	2	570.7420043945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PNESCNGPVHS_	REV__ENST00000466618.1_1_2:242002912-242027813:+|nuORF;REV__nc|ENSG00000162804|Q8TER0-3|SNED1;REV__nc|ENSG00000162804|Q8TER0-4|SNED1	20.83715455343099	0.7712264395190968	6				NaN	NaN	0	NaN	336	2231	2567
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2570	12.264	NaN	815.87	30	0	257.47	0.035	+			2101	ALFVAMNSK	9	41	490.7668006451781	979.5190483571562	2	490.7668762207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ALFVAMNSK_	ENSG00000111241|ENST00000228837|FGF6	27.882242232435846	0.5426732730940306	6				NaN	NaN	0	NaN	337	2231	2567
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2581	12.289	NaN	1341.9	30	0	287.95	0.14			+	31100	QFQINQFIQ	9	43	389.2033203475664	NaN	0	389.2035217285156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QFQINQFIQ_	REV__ENSG00000188869|ENST00000359440|TMC3;REV__ENST00000559982.1_1_15:81630174-81666445:-|nuORF;REV__nc|ENSG00000188869|Q7Z5M5-2|TMC3;REV__TMC3|p.H607Tfs*40|1|0.34|ENSG00000188869|chr15:81341415-81341415|G/-|frameshift_variant	64.20726635412375	0.13137488984569443	6				NaN	NaN	0	NaN	345	2234	2580
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2592	12.317	NaN	1661	30	0	435.34	0.214				-1	KKKPAAKKP	9	35	519.3444399742409	1036.6743270152817	2	519.3448486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))KKKPAAKKP_	REV__ENSG00000124610|ENST00000244573|H1-1;REV__ENSG00000187837|ENST00000343677|H1-2;tr|U7T3C8|U7T3C8_FUSNU4Fe-4Sdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00221PE=4SV=1	30.317721548370564	0.5199124245378496	6				NaN	NaN	0	NaN	353	2237	2591
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2593	12.32	NaN	1620.7	30	0	388.3	0.036	+			31261	QHQRRDPQ	8	44	532.7704920816672	1063.5264312301342	2	532.7711791992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QHQRRDPQ_	IRF2BPL|p.G195Afs*17|1|0.33|ENSG00000119669|chr14:77027209-77027209|C/-|frameshift_variant	42.396135135203025	0.6414440140393314	6				NaN	NaN	0	NaN	354	2237	2591
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2603	12.342	NaN	5797.8	30	0	1916.7	0.143			+	32432	QVIDKAQK	8	52	465.27377852945176	928.5330041257035	2	465.2741394042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QVIDKAQK_	REV__nc|ENSG801|P63132|HERVK_113_pro;REV__nc|ENSG814|P63133|ERVK-8_pol;REV__nc|ENSG821|P63135|ERVK-7_pol;REV__nc|ENSG826|Q9BXR3|ERVK-6_gag;REV__nc|ENSG844|Q9WJR5|ERVK-19_pol;REV__nc|ENSG851|Q9QC07|ERVK-18_pol;REV__nc|ENSG853|Q9UQG0|ERVK-11;REV__nc|ENSG855|P10266|ERVK-10_pol	79.45101966838831	0.3281480470254892	6				NaN	NaN	0	NaN	361	2240	2602
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2615	12.37	NaN	58499	30	0	16057	0.142				-1	 	0	94	474.29723963014936	946.5799263270987	2	474.2977600097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	370	2243	2614
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2627	12.398	NaN	2320.2	30	0	639.44	0.214	+			30550	QALARVQH	8	45	461.76380446498234	921.5130559967647	2	461.7638854980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QALARVQH_	ENSG00000173898|ENST00000533211|SPTBN2;nc|ENSG00000173898|O15020-2|SPTBN2	47.91560031466742	0.6071945918984287	6				NaN	NaN	0	NaN	379	2246	2626
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2628	12.401	NaN	2349.7	30	0	716.35	0.106			+	31474	QKYRPIER	8	37	545.3096923828125	NaN	0	545.3096923828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QKYRPIER_	REV__ENSG00000198753|ENST00000361971|PLXNB3;REV__ENST00000469190.1_1_X:153043658-153044491:+|nuORF;REV__nc|ENSG00000198753|Q9ULL4-2|PLXNB3	18.324413293986947	1.7418937515398478	6				NaN	NaN	0	NaN	380	2246	2626
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2629	12.403	NaN	1354.7	30	0	272.4	0.106			+	21566	KPDVGPKN	8	43	427.73980712890625	NaN	0	427.73980712890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KPDVGPKN_	REV__PIAS4|p.E235D|1|0.27|ENSG00000105229|chr19:4028752-4028752|G/T|missense_variant	51.33545320467046	1.7418937515398478	6				NaN	NaN	0	NaN	381	2246	2626
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2630	12.405	NaN	961.87	30	0	452.12	0.106	+			22028	KSHTGQRR	8	34	485.2699652526242	968.5253775720485	2	485.28851318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KSHTGQRR_	ENSG00000083838|ENST00000594369|ZNF446;ENST00000391694.4_1_19:58989172-58992090:+|nuORF	23.04248740728303	0.7814162927298575	6				NaN	NaN	0	NaN	382	2246	2626
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2631	12.407	NaN	627.43	30	0	111.08	0.106			+	-1	KRLREYGP	8	25	354.20001220703125	NaN	0	354.20001220703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))KRLREYGP_	REV__ENST00000394976.3_1_5:134181768-134190591:+|nuORF	25.450171626174864	1.7418937515398478	6				NaN	NaN	0	NaN	383	2246	2626
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2632	12.408	NaN	856.68	30	0	212.43	0.038			+	10784	FAHAVAGP	8	26	385.2037048339844	NaN	0	385.2037048339844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FAHAVAGP_	REV__ENST00000533708.1_1_11:82783791-82783899:+|nuORF	16.704963439144045	1.7418937515398478	6				NaN	NaN	0	NaN	384	2246	2626
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2633	12.409	NaN	545.96	30	0	222.13	0.141	+			47689	VSEESSSKVE	10	20	540.7578990855665	1079.5012452379328	2	540.7586669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VSEESSSKVE_	nc|ENSG00000100354|Q9UPQ9-2|TNRC6B	9.705651100619752	0.7671300402814404	6				NaN	NaN	0	NaN	385	2246	2626
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2645	12.436	NaN	1393.4	30	0	290.72	0.214			+	22299	KTEGWTAKG	9	46	489.2547695401229	NaN	0	489.2548522949219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTEGWTAKG_	REV__ENSG00000269058|ENST00000269881|CALR3	56.43379154798735	0.16452882468284893	6				NaN	NaN	0	NaN	394	2249	2644
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2646	12.44	NaN	1965.5	30	0	624.14	0.106	+			13295	GKAFTHLI	8	40	443.7629129747581	NaN	0	443.7628173828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GKAFTHLI_	nc|ENSG00000172748|Q8TC21-3|ZNF596	26.79610172149135	1.7418937515398478	6				NaN	NaN	0	NaN	395	2249	2644
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2647	12.442	NaN	1148.2	30	0	153.23	0.036	+			20113	KEKKRDSSL	9	38	545.8133293044644	NaN	0	545.8145751953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEKKRDSSL_	ENSG00000159140|ENST00000356577|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-4|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-6|SON;nc|ENSG00000159140|P18583-7|SON;nc|ENSG00000159140|P18583-9|SON	42.33807565288922	0.25949540651090086	6				NaN	NaN	0	NaN	396	2249	2644
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2658	12.467	NaN	76386	30	0	17539	0.214	+			38786	SSMPSSRHK	9	82	339.50220258841784	1015.4847783654536	3	339.5028991699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSMPSSRHK_	AFF4|p.R689Gfs*28|1|0.29|ENSG00000072364|chr5:132896566-132896566|A/-|frameshift_variant;ENSG00000072364|ENST00000265343|AFF4;nc|ENSG00000072364|Q9UHB7-2|AFF4	77.31757898189308	0.1091473830098891	6				NaN	NaN	0	NaN	404	2252	2657
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2659	12.471	NaN	7722.5	30	0	1552.1	0.106			+	32169	QSRGPGQLAC	10	67	508.75019027462747	1015.485827616055	2	508.75103759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QSRGPGQLAC_	REV__ENST00000517958.1_1_5:153783698-153796529:+|nuORF	74.1650062923329	0.2432923583094885	6				NaN	NaN	0	NaN	405	2252	2657
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2660	12.473	NaN	488.23	30	0	127.34	0.106	+			35535	SAVLERPK	8	22	450.2685546875	NaN	0	450.2685546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAVLERPK_	ENST00000559824.5_1_15:60771531-60771588:+|nuORF	18.324413293986947	1.7418937515398478	6				NaN	NaN	0	NaN	406	2252	2657
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2661	12.475	NaN	2799	30	0	783.83	0.106				-1	MVVVSLILL	9	31	334.88165283203125	NaN	0	334.88165283203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_M(Oxidation (M))VVVSLILL_	ADAMTS18|p.V340M|1|0.11|ENSG00000140873|chr16:77363840-77363840|C/T|missense_variant	37.15910966729921	0.2899585034171616	6				NaN	NaN	0	NaN	407	2252	2657
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2662	12.476	NaN	343.65	30	0	117.41	0.036	+			1476	AFLRYMRQ	8	20	542.7904052734375	NaN	0	542.7904052734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AFLRYMRQ_	ENSG00000139800|ENST00000267294|ZIC5	8.822329726475273	1.7418937515398478	6				NaN	NaN	0	NaN	408	2252	2657
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2675	12.504	NaN	18271	30	0	5309.5	0.214	+			3515	ASSKDAIKK	9	79	474.27894468171354	946.5433364302271	2	474.2793884277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASSKDAIKK_	DSTN|p.Y117H|1|0.26|ENSG00000125868|chr20:17604592-17604592|T/C|missense_variant;ENSG00000125868|ENST00000246069|DSTN;ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000400899.2_1_1:11051144-11051557:-|nuORF;ENST00000530945.1_1_11:65623104-65623215:-|nuORF;nc|ENSG00000125868|P60981-2|DSTN;nc|ENSG00000165410|Q9Y281-3|CFL2	143.37361013837676	0.008897369944672323	6				NaN	NaN	0	NaN	418	2255	2674
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2676	12.507	NaN	10784	30	0	3891.2	0.106	+			5395	ATYETKESKK	10	53	395.54338880565825	NaN	0	395.5433349609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATYETKESKK_	ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65623404-65625570:-|nuORF;nc|ENSG00000165410|Q9Y281-3|CFL2	60.1669710687717	0.23291468416755162	6				NaN	NaN	0	NaN	419	2255	2674
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2677	12.509	NaN	1213.2	30	0	419.34	0.106			+	21640	KPTEQHCR	8	26	333.4993896484375	NaN	0	333.4993896484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KPTEQHCR_	REV__ENSG00000182771|ENST00000327946|GRID1;REV__nc|ENSG00000182771|Q9ULK0-2|GRID1	21.9598887501803	1.7418937515398478	6				NaN	NaN	0	NaN	420	2255	2674
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2678	12.511	NaN	824.37	30	0	135.59	0.106	+			5396	ATYETKESKK	10	41	592.8114624023438	NaN	0	592.8114624023438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATYETKESKK_	ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65623404-65625570:-|nuORF;nc|ENSG00000165410|Q9Y281-3|CFL2	32.03412808689991	0.3949916132702916	6				NaN	NaN	0	NaN	421	2255	2674
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2679	12.513	NaN	440.48	30	0	157.28	0.106			+	-1	GARAAMHL	8	20	421.7185974121094	NaN	0	421.7185974121094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_GARAAM(Oxidation (M))HL_	REV__ANK1|p.L540Sfs*81|1|0.35|ENSG00000029534|chr8:41715060-41715061|-/G|frameshift_variant;REV__ANK2|p.E1746*|1|0.07|ENSG00000145362|chr4:113353848-113353849|-/C|frameshift_variant;REV__ANK2|p.N1476Mfs*12|1|0.21|ENSG00000145362|chr4:113350244-113350244|A/-|frameshift_variant;REV__ANK2|p.R2581Efs*5|1|0.41|ENSG00000145362|chr4:113356352-113356353|-/A|frameshift_variant;REV__ANK2|p.T466M|1|0.11|ENSG00000145362|chr4:113264907-113264907|C/T|missense_variant;REV__ENSG00000029534|ENST00000289734|ANK1;REV__ENSG00000145362|ENST00000357077|ANK2;REV__KIAA0146-ANK1|1|fusion;REV__KIAA0146-ANK1|2|fusion;REV__KIAA0146-ANK1|3|fusion;REV__KIAA0146-ANK1|4|fusion;REV__KIAA0146-ANK1|5|fusion;REV__nc|ENSG00000029534|P16157-10|ANK1;REV__nc|ENSG00000029534|P16157-11|ANK1;REV__nc|ENSG00000029534|P16157-12|ANK1;REV__nc|ENSG00000029534|P16157-13|ANK1;REV__nc|ENSG00000029534|P16157-14|ANK1;REV__nc|ENSG00000029534|P16157-15|ANK1;REV__nc|ENSG00000029534|P16157-16|ANK1;REV__nc|ENSG00000029534|P16157-2|ANK1;REV__nc|ENSG00000029534|P16157-21|ANK1;REV__nc|ENSG00000029534|P16157-4|ANK1;REV__nc|ENSG00000029534|P16157-5|ANK1;REV__nc|ENSG00000029534|P16157-6|ANK1;REV__nc|ENSG00000029534|P16157-7|ANK1;REV__nc|ENSG00000029534|P16157-8|ANK1;REV__nc|ENSG00000029534|P16157-9|ANK1;REV__nc|ENSG00000029534|P16157|ANK1;REV__nc|ENSG00000145362|Q01484-2|ANK2;REV__nc|ENSG00000145362|Q01484-5|ANK2	13.775330524044264	1.7418937515398478	6				NaN	NaN	0	NaN	422	2255	2674
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2680	12.515	NaN	3454.3	30	0	1479.8	0.036	+			21954	KSAPATGGVKK	11	46	348.5450439453125	NaN	0	348.5450439453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KSAPATGGVKK_	ENSG00000168148|ENST00000366696|H3-4;ENSG00000183598|ENST00000331491|H3C13;ENSG00000197153|ENST00000359303|H3C12;ENSG00000197409|ENST00000356476|H3C4;ENSG00000203811|ENST00000369158|H3C14;ENSG00000203852|ENST00000403683|H3C15;ENSG00000273983|ENST00000614378|H3C8;ENSG00000274750|ENST00000614911|H3C6;ENSG00000275379|ENST00000616365|H3C11;ENSG00000275714|ENST00000613854|H3C1;ENSG00000277775|ENST00000618052|H3C7;ENSG00000278828|ENST00000685041|H3C10;nc|ENSG00000273213|Q5TEC6|H3-7	49.46582953369473	0.3191553428975593	6				NaN	NaN	0	NaN	423	2255	2674
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2681	12.515	NaN	86511	30	0	26025	0.14	+			20758	KHDIRQPR	8	88	525.3014645516157	1048.5883761700313	2	525.30224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KHDIRQPR_	sp|F5HB40|UL84_HCMVMProteinUL84OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL84PE=3SV=1;sp|P16727|UL84_HCMVAProteinUL84OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL84PE=1SV=1	51.33545320467046	0.5859736979383976	6				NaN	NaN	0	NaN	424	2255	2674
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2698	12.552	NaN	8810.7	30	0	2133.4	0.214	+			19686	KDPTAAAAALN	11	64	521.7795833215133	1041.5446137098265	2	521.7806396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KDPTAAAAALN_	ENSG00000165915|ENST00000362021|SLC39A13;nc|ENSG00000165915|Q96H72-2|SLC39A13;SLC39A13|p.Q301Vfs*38|1|0.53|ENSG00000165915|chr11:47414891-47414892|CA/-|frameshift_variant	76.16968421966216	0.18430501143391895	6				NaN	NaN	0	NaN	438	2258	2697
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2699	12.556	NaN	4128.9	30	0	1820.8	0.106	+			13427	GLGSRHRPVA	10	40	350.5369605809763	NaN	0	350.5368347167969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GLGSRHRPVA_	ENSG00000133401|ENST00000438447|PDZD2;ENST00000502489.5_1_5:31983264-32077762:+|nuORF;nc|ENSG00000133401|O15018-2|PDZD2;PDZD2|p.D2774Rfs*7|1|0.29|ENSG00000133401|chr5:32101201-32101202|-/G|frameshift_variant;PDZD2|p.E2629Kfs*37|1|0.23|ENSG00000133401|chr5:32097314-32097314|A/-|frameshift_variant;PDZD2|p.K1843Rfs*31|3|0.26|ENSG00000133401|chr5:32088970-32088970|A/-|frameshift_variant;PDZD2|p.S2770Gfs*12|1|0.04|ENSG00000133401|chr5:32101193-32101194|-/GGGT|frameshift_variant;PDZD2|p.V1845Rfs*6|2|0.38|ENSG00000133401|chr5:32088969-32088970|-/A|frameshift_variant	24.519189625965996	0.41966695327750003	6				NaN	NaN	0	NaN	439	2258	2697
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2700	12.558	NaN	1138.7	30	0	245.5	0.106			+	15524	GVCVFRAK	8	27	440.24885212813285	NaN	0	440.2489013671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GVCVFRAK_	REV__CYSLTR1|p.K219Nfs*3|1|0.33|ENSG00000173198|chrX:78273090-78273090|T/-|frameshift_variant;REV__CYSLTR1|p.N224Ifs*9|1|0.59|ENSG00000173198|chrX:78273076-78273076|T/-|frameshift_variant;REV__ENSG00000173198|ENST00000373304|CYSLTR1	8.822329726475273	1.7418937515398478	6				NaN	NaN	0	NaN	440	2258	2697
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2701	12.56	NaN	3505	30	0	963.64	0.106	+			22010	KSGAQKKKK	9	51	501.824466922787	NaN	0	501.82421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KSGAQKKKK_	CCDC153|p.K10N|1|0.43|ENSG00000248712|chr11:119195458-119195458|C/A|missense_variant;ENSG00000248712|ENST00000503566|CCDC153;ENST00000375140.7_1_11:119064239-119066706:-|nuORF	77.31757898189308	0.08057531075035683	6				NaN	NaN	0	NaN	441	2258	2697
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2702	12.561	NaN	1596	30	0	188.81	0.106			+	32105	QSHFKEIK	8	47	508.779444365916	1015.544335798632	2	508.7799377441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QSHFKEIK_	REV__ENSG00000143742|ENST00000304786|SRP9	44.377184641726394	0.6291511924298419	6				NaN	NaN	0	NaN	442	2258	2697
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2703	12.563	NaN	478.35	30	0	60.996	0.106			+	21290	KLRELDQK	8	29	515.3060913085938	NaN	0	515.3060913085938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KLRELDQK_	REV__ENSG00000116852|ENST00000461742|KIF21B;REV__nc|ENSG00000116852|O75037-2|KIF21B;REV__nc|ENSG00000116852|O75037-3|KIF21B;REV__nc|ENSG00000116852|O75037|KIF21B	27.882242232435846	1.7418937515398478	6				NaN	NaN	0	NaN	443	2258	2697
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2704	12.565	NaN	949.62	30	0	218.15	0.035			+	23191	KWSRCGTAK	9	50	518.772626727358	1035.5307005215159	2	518.7734985351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KWSRCGTAK_	REV__ENST00000441257.1_1_10:31607356-31607903:-|nuORF;REV__ENST00000450834.2_1_10:31597037-31607903:-|nuORF;REV__ENST00000606250.1_1_10:31607570-31607903:-|nuORF;REV__ENST00000607455.1_1_10:31607508-31607900:-|nuORF	29.170058357718403	0.5306379469863586	6				NaN	NaN	0	NaN	444	2258	2697
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2717	12.592	NaN	2777.9	30	0	1107	0.214	+			40809	SVDYGKKSK	9	48	506.2768255524949	1010.5390981717899	2	506.2772216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVDYGKKSK_	ENSG00000075886|ENST00000321253|TUBA3D;ENSG00000123416|ENST00000336023|TUBA1B;ENSG00000127824|ENST00000248437|TUBA4A;ENSG00000167552|ENST00000301071|TUBA1A;ENSG00000167553|ENST00000301072|TUBA1C;ENSG00000198033|ENST00000400113|TUBA3C;ENST00000442739.1_1_22:21363397-21363730:-|nuORF;nc|ENSG00000127824|P68366-2|TUBA4A;nc|ENSG00000167552|Q71U36-2|TUBA1A;nc|ENSG00000198033|P0DPH7-2|TUBA3C;TUBA3C|p.T361Rfs*18|1|0.17|ENSG00000198033|chr13:19174136-19174136|G/-|frameshift_variant;TUBA3D|p.G366Efs*13|1|0.17|ENSG00000075886|chr2:131482588-131482588|G/-|frameshift_variant;TUBA3D|p.V328Pfs*54|1|0.45|ENSG00000075886|chr2:131480665-131480666|-/CCCAAAGA|frameshift_variant;TUBA4A|p.V182Gfs*32|1|0.04|ENSG00000127824|chr2:219251156-219251157|-/TACACCA|frameshift_variant	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	454	2261	2716
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2718	12.596	NaN	6534.7	30	0	941.12	0.106	+			34312	RTMETAKEK	9	68	547.2867501965289	1092.5589474598578	2	547.2879638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RTMETAKEK_	ENSG00000166866|ENST00000300119|MYO1A	104.42354056486148	0.0346881550498418	6				NaN	NaN	0	NaN	455	2261	2716
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2719	12.598	NaN	1010.8	30	0	126.92	0.106	+			44708	TTKKRMAMAQ	10	39	583.3126220703125	NaN	0	583.3126220703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TTKKRMAMAQ_	ENST00000407924.2_1_6:27705341-27705923:-|nuORF	42.86426827375447	0.3507156137006061	6				NaN	NaN	0	NaN	456	2261	2716
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2720	12.6	NaN	9823.8	30	0	2555	0.106	+			3421	ASQKNFKAK	9	68	341.1971106193684	1020.5695024583052	3	341.1977844238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASQKNFKAK_	ENSG00000176731|ENST00000619594|RBIS;ENST00000523245.1_1_8:86129602-86132627:-|nuORF;nc|ENSG00000176731|Q8N0T1-2|RBIS	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	457	2261	2716
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2721	12.602	NaN	988.92	30	0	148.2	0.106	+			18980	IVSGNTVLAAK	11	36	536.8220996339568	NaN	0	537.2702026367188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IVSGNTVLAAK_	CHD8|p.D1870Rfs*3|1|0.3|ENSG00000100888|chr14:21394187-21394188|-/G|frameshift_variant;CHD8|p.I1108Nfs*7|1|0.24|ENSG00000100888|chr14:21403648-21403649|-/T|frameshift_variant;CHD8|p.I351Nfs*70|1|0.25|ENSG00000100888|chr14:21429127-21429128|-/T|frameshift_variant;CHD8|p.L1905Ffs*30|2|0.29|ENSG00000100888|chr14:21394082-21394082|G/-|frameshift_variant;CHD8|p.N2371Ifs*6|1|0.32|ENSG00000100888|chr14:21391017-21391017|T/-|frameshift_variant;CHD8|p.N2371Kfs*2|2|0.24|ENSG00000100888|chr14:21391016-21391017|-/T|frameshift_variant;CHD8|p.V1538*|1|0.4|ENSG00000100888|chr14:21400267-21400267|T/-|frameshift_variant;ENSG00000100888|ENST00000646647|CHD8	24.519189625965996	0.45614437233802635	6				NaN	NaN	0	NaN	458	2261	2716
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2722	12.603	NaN	1596.6	30	0	371.86	0.036	+			35204	SAKGLESIRV	10	37	353.8766955693864	NaN	0	353.87689208984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SAKGLESIRV_	ENSG00000131914|ENST00000326279|LIN28A;LIN28A|p.K99N|1|0.28|ENSG00000131914|chr1:26425371-26425371|G/C|missense_variant	14.137123925751023	0.4201028297492154	6				NaN	NaN	0	NaN	459	2261	2716
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2723	12.604	NaN	974.25	30	0	247.42	0.14	+			1524	AGANRDSHR	9	31	328.4955749511719	NaN	0	328.4955749511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AGANRDSHR_	ENST00000539777.5_1_1:168054037-168054433:-|nuORF	44.377184641726394	0.24544280798894275	6				NaN	NaN	0	NaN	460	2261	2716
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2737	12.635	NaN	4975.9	30	0	745.14	0.214			+	12211	GARGPRHK	8	64	439.7567830832325	877.499013233265	2	439.7574462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GARGPRHK_	REV__ENST00000529681.5_1_11:1263596-1263746:+|nuORF	44.53106598305862	0.628196326904373	6				NaN	NaN	0	NaN	471	2264	2736
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2738	12.639	NaN	7172.6	30	0	1135.6	0.106	+			1537	AGCGKTYTK	9	69	493.2415044589931	984.4684559847863	2	493.24200439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_AGC(Carbamidomethyl (C))GKTYTK_	ENSG00000127528|ENST00000248071|KLF2;ENSG00000136826|ENST00000374672|KLF4;ENST00000497048.5_1_9:110248034-110250560:-|nuORF;KLF4|p.D429Lfs*13|1|0.08|ENSG00000136826|chr9:107485905-107485906|TC/-|frameshift_variant;nc|ENSG00000136826|O43474-4|KLF4;nc|ENSG00000136826|O43474|KLF4	120.30596017624542	0.02101454110788768	6				NaN	NaN	0	NaN	472	2264	2736
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2739	12.641	NaN	2228.6	30	0	822.36	0.106	+			21249	KLKTCSRAN	9	56	510.7839184586635	1019.553283984127	2	510.7846374511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KLKTCSRAN_	ENSG00000156650|ENST00000287239|KAT6B;ENST00000490365.1_1_10:76744849-76785012:+|nuORF;KAT6B|p.L1460*|1|0.36|ENSG00000156650|chr10:75029198-75029198|T/-|frameshift_variant;KAT6B|p.R1133Gfs*12|1|0.07|ENSG00000156650|chr10:75024979-75024979|A/-|frameshift_variant;nc|ENSG00000156650|Q8WYB5-2|KAT6B;nc|ENSG00000156650|Q8WYB5-3|KAT6B	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	473	2264	2736
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2740	12.643	NaN	2999.8	30	0	965.12	0.106			+	28931	NRKKVKKASPK	11	45	428.6124919413592	NaN	0	428.27862548828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NRKKVKKASPK_	REV__ENSG00000077097|ENST00000264331|TOP2B;REV__nc|ENSG00000077097|Q02880-2|TOP2B;REV__TOP2B|p.S1441Kfs*20|1|0.32|ENSG00000077097|chr3:25606099-25606100|-/T|frameshift_variant;REV__TOP2B|p.S1441Vfs*41|4|0.13|ENSG00000077097|chr3:25606100-25606100|T/-|frameshift_variant;REV__TOP2B|p.S1476Ffs*11|2|0.3|ENSG00000077097|chr3:25604822-25604823|-/A|frameshift_variant	21.0322348234405	0.456735970842152	6				NaN	NaN	0	NaN	474	2264	2736
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2741	12.645	NaN	278.13	30	0	55.14	0.034	+			42411	TAKNIIKQ	8	13	458.2838134765625	NaN	0	458.2838134765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TAKNIIKQ_	ENSG00000143952|ENST00000272322|VPS54;nc|ENSG00000143952|Q9P1Q0-2|VPS54;nc|ENSG00000143952|Q9P1Q0-4|VPS54	11.511019455917149	1.7418937515398478	6				NaN	NaN	0	NaN	475	2264	2736
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2753	12.67	NaN	13263	30	0	2434	0.214	+			22684	KVADHSGQVK	10	72	534.7930838420999	1067.5716147509997	2	534.7940063476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVADHSGQVK_	ENSG00000188243|ENST00000682242|COMMD6;ENST00000477377.1_1_13:76104099-76111947:-|nuORF;nc|ENSG00000188243|Q7Z4G1-2|COMMD6	136.5150327860613	0.011683253857074924	6				NaN	NaN	0	NaN	484	2267	2752
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2754	12.674	NaN	1787.6	30	0	463.8	0.106	+			22747	KVDAGGKVK	9	47	451.2768788588834	NaN	0	451.2769470214844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVDAGGKVK_	ENSG00000089009|ENST00000202773|RPL6;RPL6|p.K237Rfs*4|1|0.04|ENSG00000089009|chr12:112405856-112405857|TT/-|frameshift_variant	101.25262130126117	0.018912469721856617	6				NaN	NaN	0	NaN	485	2267	2752
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2755	12.676	NaN	19695	30	0	8255.4	0.106	+			22685	KVADHSGQVK	10	57	356.864157488014	1067.570643064242	3	356.86474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KVADHSGQVK_	ENSG00000188243|ENST00000682242|COMMD6;ENST00000477377.1_1_13:76104099-76111947:-|nuORF;nc|ENSG00000188243|Q7Z4G1-2|COMMD6	46.45678178249821	0.4896490706773647	6				NaN	NaN	0	NaN	486	2267	2752
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2756	12.677	NaN	879.61	30	0	187.22	0.106	+			8864	EERKHKGALQ	10	38	598.3312377929688	NaN	0	598.3312377929688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EERKHKGALQ_	HYDIN|p.E2293Q|1|0.18|ENSG00000157423|chr16:70938732-70938732|C/G|missense_variant	32.75053402867276	0.3926392905881664	6				NaN	NaN	0	NaN	487	2267	2752
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2757	12.679	NaN	6290.6	30	0	1800.9	0.106	+			22943	KVQEPQGKAK	10	56	371.5519610152105	1111.6340536458315	3	371.5519714355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KVQEPQGKAK_	ENSG00000167397|ENST00000394975|VKORC1;ENST00000394971.7_1_16:31102457-31105584:-|nuORF;ENST00000394974.2_1_1:58694357-58694534:-|nuORF	56.43379154798735	0.3982744522255666	6				NaN	NaN	0	NaN	488	2267	2752
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2758	12.681	NaN	1683	30	0	286.67	0.106				-1	 	0	52	485.80520131575616	969.5958496983123	2	485.8053894042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	489	2267	2752
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2759	12.683	NaN	403.45	30	0	149.78	0.035	+			20644	KGHHPLNPQ	9	24	514.2765502929688	NaN	0	514.2765502929688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KGHHPLNPQ_	ENSG00000237412|ENST00000617714|PRSS56	23.04248740728303	0.3589936788096251	6				NaN	NaN	0	NaN	490	2267	2752
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2772	12.71	NaN	48942	30	0	32941	0.214	+			29807	PKFCFPHSK	9	74	383.1956107842996	1146.5650029530989	3	383.19586181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_PKFC(Carbamidomethyl (C))FPHSK_	DENND2C|p.D544H|1|0.27|ENSG00000175984|chr1:114604959-114604959|C/G|missense_variant	49.536043120802724	0.308405419312776	6				NaN	NaN	0	NaN	500	2270	2771
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2773	12.714	NaN	1126.2	30	0	139.39	0.106			+	31457	QKTFVQKL	8	46	496.2984619140625	NaN	0	496.2984619140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QKTFVQKL_	REV__nc|ENSG00000176659|Q8N268-2|LINC02910	47.91560031466742	1.7418937515398478	6				NaN	NaN	0	NaN	501	2270	2771
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2774	12.716	NaN	961.05	30	0	181.7	0.106	+			19727	KDTRKSKGV	9	47	509.8038330078125	NaN	0	509.8038330078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KDTRKSKGV_	ENSG00000139168|ENST00000266529|ZCRB1;ZCRB1|p.K141Efs*4|1|0.29|ENSG00000139168|chr12:42313900-42313901|-/T|frameshift_variant;ZCRB1|p.W185Mfs*13|2|0.39|ENSG00000139168|chr12:42313168-42313169|-/T|frameshift_variant	31.954861631926434	0.3162336699109506	6				NaN	NaN	0	NaN	502	2270	2771
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2775	12.718	NaN	660.76	30	0	170.57	0.106				-1	CGLLSSSF	8	16	435.7052917480469	NaN	0	435.7052917480469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_C(Carbamidomethyl (C))GLLSSSF_	ENSG00000171928|ENST00000307767|TVP23B	8.822329726475273	1.7418937515398478	6				NaN	NaN	0	NaN	503	2270	2771
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2776	12.719	NaN	1369.7	30	0	207.92	0.034	+			20393	KETEGKLR	8	46	480.7762626247269	959.5379723162538	2	480.7769470214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KETEGKLR_	CEP152|p.E1488Ifs*9|1|0.07|ENSG00000103995|chr15:48738920-48738921|-/TAATGAAAGACTTGGTTTAAAAGTAT|frameshift_variant;CEP152|p.E966Ffs*23|1|0.03|ENSG00000103995|chr15:48756352-48756353|-/AGAAGGAGACAGAA|frameshift_variant;CEP152|p.I1277Lfs*20|1|0.2|ENSG00000103995|chr15:48744246-48744246|T/-|frameshift_variant;CEP152|p.L1674Tfs*23|1|0.09|ENSG00000103995|chr15:48738362-48738363|-/T|frameshift_variant;CEP152|p.Q965Lfs*16|1|0.02|ENSG00000103995|chr15:48756354-48756355|-/ACAAACTTGTCTA|frameshift_variant;ENSG00000103995|ENST00000380950|CEP152;nc|ENSG00000103995|O94986-1|CEP152;nc|ENSG00000103995|O94986-2|CEP152;nc|ENSG00000103995|O94986-3|CEP152	64.20726635412375	0.4601301477144759	6				NaN	NaN	0	NaN	504	2270	2771
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2791	12.75	NaN	75230	30	0	12886	0.214				-1	 	0	99	340.2006777821103	1017.5802039465309	3	340.2012023925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	516	2273	2790
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2792	12.753	NaN	2998.1	30	0	1030.4	0.106	+			17091	HSCPESVKK	9	63	536.2657235516302	1070.5168941700604	2	536.2666625976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_HSC(Carbamidomethyl (C))PESVKK_	ENSG00000178425|ENST00000319550|NT5DC1;nc|ENSG00000178425|Q5TFE4-2|NT5DC1;NT5DC1|p.F379Lfs*74|1|0.1|ENSG00000178425|chr6:116239002-116239002|T/-|frameshift_variant	113.41158876095287	0.025516849225023126	6				NaN	NaN	0	NaN	517	2273	2790
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2793	12.755	NaN	3245.3	30	0	1007.9	0.106	+			31480	QLALPDQQK	9	56	520.7893300476347	NaN	0	520.789306640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QLALPDQQK_	ENST00000478241.6_2_12:56223797-56224400:+|nuORF	49.44154591367651	0.21054156626303966	6				NaN	NaN	0	NaN	518	2273	2790
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2794	12.757	NaN	1716.6	30	0	499.81	0.106				-1	HSCPESVKK	9	40	357.8465270996094	NaN	0	357.8465270996094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_HSC(Carbamidomethyl (C))PESVKK_	ENSG00000178425|ENST00000319550|NT5DC1;nc|ENSG00000178425|Q5TFE4-2|NT5DC1;NT5DC1|p.F379Lfs*74|1|0.1|ENSG00000178425|chr6:116239002-116239002|T/-|frameshift_variant	32.75053402867276	0.3122164853807509	6				NaN	NaN	0	NaN	519	2273	2790
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2795	12.759	NaN	2651.1	30	0	223.95	0.106			+	31819	QPQKKYNQ	8	63	517.2732543945312	NaN	0	517.2732543945312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QPQKKYNQ_	REV__GSAP|p.R793Q|1|0.48|ENSG00000186088|chr7:77311936-77311936|C/T|missense_variant	62.97842346883844	1.7418937515398478	6				NaN	NaN	0	NaN	520	2273	2790
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2796	12.761	NaN	31928	30	0	7721.1	0.035	+			15350	GTVNRATEK	9	80	488.2640378000793	974.5135226669586	2	488.2642517089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTVNRATEK_	ENSG00000164611|ENST00000352433|PTTG1;ENSG00000250254|ENST00000504686|PTTG2;ENST00000519287.1_1_5:159849240-159855685:+|nuORF;ENST00000523659.5_1_5:159849319-159851384:+|nuORF;ENST00000524244.5_1_5:159849319-159849927:+|nuORF;nc|ENSG00000213005|Q9NZH4|PTTG3P;nc|ENSG00000250254|Q9NZH5|PTTG2;PTTG2|p.K84Nfs*10|1|0.19|ENSG00000250254|chr4:37960682-37960682|A/-|frameshift_variant	140.11223852658463	0.010427410095706195	6				NaN	NaN	0	NaN	521	2273	2790
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2797	12.761	NaN	3171.4	30	0	950.22	0.143			+	39033	SSSLQFLLA	9	30	322.5136413574219	NaN	0	322.5136413574219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSSLQFLLA_	REV__ENST00000521286.1_1_8:86131505-86132537:-|nuORF	27.882242232435846	0.3367954786602879	6				NaN	NaN	0	NaN	522	2273	2790
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2815	12.8	NaN	10779	30	0	1716.8	0.214			+	23063	KVTLASKGAG	10	68	466.28181050766665	930.5490680821333	2	466.281982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVTLASKGAG_	REV__ENSG00000103710|ENST00000220062|RASL12	93.1432384553994	0.11307820852620741	6				NaN	NaN	0	NaN	537	2276	2814
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2816	12.804	NaN	28495	30	0	5781.4	0.106				-1	 	0	55	376.5508662708872	1126.6307694128616	3	376.5511169433594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	538	2276	2814
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2817	12.806	NaN	14297	30	0	3606.5	0.106				-1	 	0	52	564.3224781176265	1126.6304033020529	2	564.3236694335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	539	2276	2814
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2818	12.807	NaN	6502.4	30	0	2938.8	0.106			+	33849	RRGGAGKRL	9	46	324.20572774089635	969.5953538228891	3	324.2063293457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RRGGAGKRL_	REV__ENSG00000166016|ENST00000435224|ABTB2	21.9598887501803	0.5980208138527809	6				NaN	NaN	0	NaN	540	2276	2814
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2819	12.809	NaN	5435.9	30	0	954.48	0.106	+			46971	VKKKNDNLLK	10	76	600.3760958484679	1198.7376387637357	2	600.3775024414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VKKKNDNLLK_	ENSG00000188219|ENST00000683005|POTEE;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;POTEE|p.N792Kfs*34|1|0.2|ENSG00000188219|chr2:131263828-131263829|-/A|frameshift_variant	109.47833844074708	0.04954876308859735	6				NaN	NaN	0	NaN	541	2276	2814
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2820	12.811	NaN	1031	30	0	89.531	0.035	+			20460	KEVKREVK	8	50	508.31704116061667	NaN	0	508.2860412597656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KEVKREVK_	tr|U7SGG0|U7SGG0_FUSNUGlutamine--fructose-6-phosphateaminotransferase[isomerizing]OS=FusobacteriumnucleatumCTI-5OX=1316586GN=glmSPE=3SV=1	45.97224482568171	1.7418937515398478	6				NaN	NaN	0	NaN	542	2276	2814
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2821	12.812	NaN	1789	30	0	236.04	0.138	+			14111	GSLNHAASK	9	52	442.7325134277344	NaN	0	442.7325134277344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GSLNHAASK_	ENSG00000031698|ENST00000234677|SARS1	68.84614121027924	0.11159004992091766	6				NaN	NaN	0	NaN	543	2276	2814
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2838	12.848	NaN	63392	30	0	29253	0.214				-1	 	0	83	473.3076420503126	944.6007311674252	2	473.3079528808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	557	2279	2837
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2839	12.852	NaN	21743	30	0	2726.5	0.106				-1	 	0	79	495.7693573270012	989.5241617208025	2	495.7696838378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	558	2279	2837
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2840	12.854	NaN	996.46	30	0	127.17	0.106	+			46767	VGTSLLAW	8	39	423.7404019312175	NaN	0	423.74029541015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VGTSLLAW_	CD300A|p.A196T|1|0.33|ENSG00000167851|chr17:74477488-74477488|G/A|missense_variant	37.028477286268924	1.7418937515398478	6				NaN	NaN	0	NaN	559	2279	2837
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2841	12.856	NaN	581.97	30	0	191.85	0.106	+			7039	CSRNVTRRLK	10	19	616.8515625	NaN	0	616.8515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_CSRNVTRRLK_	ENST00000493053.5_1_10:7830135-7848940:+|nuORF	14.086013023434994	0.4201028297492154	6				NaN	NaN	0	NaN	560	2279	2837
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2842	12.858	NaN	1673.4	30	0	515.29	0.106	+			7659	DKSQPKSIR	9	53	529.8010864280742	1057.5876199229483	2	529.8016967773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DKSQPKSIR_	ENSG00000058272|ENST00000450142|PPP1R12A;nc|ENSG00000058272|O14974-2|PPP1R12A;nc|ENSG00000058272|O14974-3|PPP1R12A;nc|ENSG00000058272|O14974-4|PPP1R12A;nc|ENSG00000058272|O14974-5|PPP1R12A	52.936696900407355	0.27249468807391813	6				NaN	NaN	0	NaN	561	2279	2837
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2843	12.859	NaN	2696.2	30	0	881.81	0.035			+	7768	DPCISSLKK	9	35	330.84826032627234	989.522951579017	3	330.84893798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DPCISSLKK_	REV__ENST00000470510.5_1_1:245912867-246021878:-|nuORF	23.04248740728303	0.5879033540491928	6				NaN	NaN	0	NaN	562	2279	2837
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2844	12.86	NaN	440.33	30	0	41.958	0.141			+	23174	KWKLDCVLA	9	33	538.3008422851562	NaN	0	538.3008422851562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KWKLDCVLA_	REV__ENSG00000174840|ENST00000311180|PDE12;REV__ENST00000487257.1_2_3:57545269-57545728:+|nuORF	37.15910966729921	0.2899585034171616	6				NaN	NaN	0	NaN	563	2279	2837
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2860	12.895	NaN	1229.2	30	0	493.3	0.214	+			12238	GASKTSHQGR	10	34	514.7666632918961	1027.518773650592	2	514.7672729492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GASKTSHQGR_	ENST00000583245.5_1_17:46019279-46019411:+|nuORF	37.81151784470057	0.569310847604193	6				NaN	NaN	0	NaN	576	2282	2859
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2861	12.899	NaN	10640	30	0	2840.9	0.106			+	13169	GHLNELRHQQ	10	53	411.21458147966564	1230.621915039197	3	411.2151184082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GHLNELRHQQ_	REV__ENSG00000168894|ENST00000306368|RNF181;REV__ENST00000441634.5_1_2:85824501-85824624:+|nuORF;REV__ENST00000456023.1_1_2:85824088-85824624:+|nuORF	33.921630207806714	0.6028135429846169	6				NaN	NaN	0	NaN	577	2282	2859
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2862	12.901	NaN	1276.8	30	0	362.1	0.106	+			9052	EGGDIRVRR	9	44	529.2981780269827	NaN	0	529.3218994140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EGGDIRVRR_	ENSG00000140285|ENST00000267843|FGF7;nc|ENSG00000140285|P21781-2|FGF7	44.116797842482775	0.2472372736944149	6				NaN	NaN	0	NaN	578	2282	2859
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2863	12.903	NaN	1311.1	30	0	312.38	0.106	+			33927	RRYGQKNK	8	49	525.3014645516157	1048.5883761700313	2	525.2974853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RRYGQKNK_	HACD3|p.K358N|1|0.19|ENSG00000074696|chr15:65576364-65576364|G/T|missense_variant	29.14955571784316	0.7342621283720113	6				NaN	NaN	0	NaN	579	2282	2859
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2864	12.904	NaN	989.06	30	0	444.21	0.106			+	-1	QIIPIPDSM	9	25	343.8477725023699	NaN	0	343.5138854980469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_QIIPIPDSM(Oxidation (M))_	REV__ENSG00000145555|ENST00000513610|MYO10;REV__nc|ENSG00000145555|Q9HD67-3|MYO10	14.864876125193954	0.3866709117995958	6				NaN	NaN	0	NaN	580	2282	2859
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2865	12.906	NaN	1414.4	30	0	217.11	0.035			+	33523	RKTIIWQP	8	55	521.3125855370187	NaN	0	521.2647094726562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RKTIIWQP_	REV__ENSG00000153303|ENST00000283309|FRMD1;REV__nc|ENSG00000153303|Q8N878-2|FRMD1	42.396135135203025	1.7418937515398478	6				NaN	NaN	0	NaN	581	2282	2859
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2866	12.907	NaN	1074.3	30	0	159.87	0.139	+			19733	KDVASGHKG	9	42	449.7397501678569	897.4649474025139	2	449.7404479980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KDVASGHKG_	ENSG00000074181|ENST00000263388|NOTCH3	49.536043120802724	0.308405419312776	6				NaN	NaN	0	NaN	582	2282	2859
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2881	12.94	NaN	7175	30	0	2218.5	0.214	+			21967	KSDLKTQK	8	66	474.27894468171354	946.5433364302271	2	474.2793273925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSDLKTQK_	ENST00000415694.1_1_9:109932192-109932378:-|nuORF	66.42927471994793	0.4381325844043345	6				NaN	NaN	0	NaN	594	2285	2880
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2882	12.944	NaN	195230	30	0	29745	0.106	+			33955	RSASSATQVHK	11	160	391.21032701213363	1170.609151636601	3	391.21075439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RSASSATQVHK_	ENST00000361272.8_2_8:17102747-17104366:-|nuORF	188.9123650225555	2.265499584896125E-06	6				NaN	NaN	0	NaN	595	2285	2880
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2883	12.946	NaN	3864.2	30	0	509.76	0.106	+			36398	SETKNTKKL	9	61	524.8033185545503	NaN	0	524.8035278320312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SETKNTKKL_	ENST00000358746.6_1_5:94882778-94882820:-|nuORF	78.26377905018397	0.07733306720594871	6				NaN	NaN	0	NaN	596	2285	2880
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2884	12.948	NaN	1843.6	30	0	680.11	0.106				-1	ACCCCCGDEM	10	40	351.7471210862845	NaN	0	351.7471923828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_ACCCCCGDEM(Oxidation (M))_	ENSG00000135272|ENST00000393486|MDFIC;ENST00000431629.5_2_7:114654517-114655986:+|nuORF;nc|ENSG00000135272|Q9P1T7-1|MDFIC	4.338815125287529	0.4201028297492154	6				NaN	NaN	0	NaN	597	2285	2880
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2885	12.949	NaN	1354.7	30	0	405.75	0.106	+			1553	AGFHLNPKAIE	11	27	399.5530785690527	1195.637406307358	3	399.5533447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AGFHLNPKAIE_	ENSG00000166398|ENST00000299505|GARRE1	15.333111300571575	0.7986936308376149	6				NaN	NaN	0	NaN	598	2285	2880
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2886	12.951	NaN	2137	30	0	587.32	0.035	+			21869	KRLTKTQK	8	55	501.824466922787	NaN	0	501.824462890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KRLTKTQK_	ENST00000360003.7_1_10:121618406-121618611:-|nuORF	63.30626980617807	1.7418937515398478	6				NaN	NaN	0	NaN	599	2285	2880
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2887	12.952	NaN	2766.1	30	0	274.78	0.142	+			20050	KEKDSKGTRL	10	54	581.3318590467965	1160.6491651603928	2	581.3333740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KEKDSKGTRL_	ENSG00000058272|ENST00000450142|PPP1R12A;ENST00000550001.1_1_12:80201004-80203592:-|nuORF;nc|ENSG00000058272|O14974-2|PPP1R12A;nc|ENSG00000058272|O14974-3|PPP1R12A;nc|ENSG00000058272|O14974-4|PPP1R12A;nc|ENSG00000058272|O14974-5|PPP1R12A;PPP1R12A|p.N540Ifs*23|1|0.49|ENSG00000058272|chr12:79807262-79807262|T/-|frameshift_variant	48.601550744091256	0.46988609897316763	6				NaN	NaN	0	NaN	600	2285	2880
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2904	12.987	NaN	2011.6	30	0	1273.9	0.214	+			13983	GSAVLMKMR	9	27	331.5168754907111	991.5287970723332	3	331.5174560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSAVLMKMR_	ENST00000560190.5_1_15:57212111-57565250:+|nuORF	17.364965105453717	0.6112419832031293	6				NaN	NaN	0	NaN	614	2288	2903
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2905	12.991	NaN	2355.8	30	0	1060.1	0.106	+			9191	EGQLQREKR	9	37	381.87891122356234	1142.614904270887	3	381.8789978027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EGQLQREKR_	ENSG00000267909|ENST00000599174|CCDC177	23.52269567125451	0.5834155526130771	6				NaN	NaN	0	NaN	615	2288	2903
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2906	12.993	NaN	6107	30	0	2503.9	0.106			+	48029	VSRLSARTQ	9	53	339.86441628330294	1016.5714194501088	3	339.864501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSRLSARTQ_	REV__ENSG00000177602|ENST00000325418|HASPIN;REV__nc|ENSG00000177602|Q8TF76-2|HASPIN	29.14955571784316	0.5308295550522326	6				NaN	NaN	0	NaN	616	2288	2903
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2907	12.995	NaN	1399.2	30	0	241.19	0.106			+	30215	PSRQVAQPS	9	53	485.2585241898227	968.5024954464454	2	485.2591552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PSRQVAQPS_	REV__ENST00000564460.2_1_16:952344-953654:-|nuORF;REV__ENST00000564460.2_1_16:952537-955195:-|nuORF;REV__ENST00000564460.2_1_16:952537-955195:-|nuORF	47.657333605630114	0.33044192980041115	6				NaN	NaN	0	NaN	617	2288	2903
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2908	12.996	NaN	381.98	30	0	73.69	0.106				-1	EKCKIFVTF	9	23	586.3126220703125	NaN	0	586.3126220703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_EKC(Carbamidomethyl (C))KIFVTF_	ENST00000369940.6_1_6:79595137-79607609:+|nuORF	21.9598887501803	0.3626577482100488	6				NaN	NaN	0	NaN	618	2288	2903
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2909	12.998	NaN	656.15	30	0	173.31	0.038	+			46747	VGSATISH	8	30	386.20330810546875	NaN	0	386.20330810546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VGSATISH_	ENST00000544484.5_1_12:6707496-6708954:-|nuORF	21.70233525837049	1.7418937515398478	6				NaN	NaN	0	NaN	619	2288	2903
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2910	12.999	NaN	590.38	30	0	65.496	0.14			+	10340	ETTLAWLLI	9	36	530.3102922652918	NaN	0	530.3111572265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ETTLAWLLI_	REV__ENSG00000188211|ENST00000338965|NCR3LG1	19.996771675451527	0.3693019437812985	6				NaN	NaN	0	NaN	620	2288	2903
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2923	13.028	NaN	18975	30	0	3450.3	0.214			+	-1	KKKGCRLVS	9	67	538.3234618829797	1074.6323708327593	2	538.32421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_KKKGC(Carbamidomethyl (C))RLVS_	REV__chr17:39202445-39202994|380|13.56|0.73|4.21|+|ENST00000678012|RPL19,RPL19;REV__ENSG00000108298|ENST00000225430|RPL19;REV__ENST00000580333.1_1_17:37356597-37358721:+|nuORF	84.9155231211612	0.07920012719736333	6				NaN	NaN	0	NaN	630	2291	2922
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2924	13.032	NaN	15462	30	0	5712.8	0.106	+			40731	SVCRGLKKGK	10	69	359.2176945581887	1074.6312542747662	3	359.2183532714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVCRGLKKGK_	TERF2|p.E87Rfs*72|1|0.63|ENSG00000132604|chr16:69385713-69385713|C/-|frameshift_variant	51.19269402634007	0.44601001148513897	6				NaN	NaN	0	NaN	631	2291	2922
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2925	13.034	NaN	28410	30	0	6602.1	0.106				-1	 	0	63	326.51300735481027	976.5171926646308	3	326.5135498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	632	2291	2922
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2926	13.035	NaN	588.39	30	0	83.281	0.106				-1	AVRCLHSL	8	27	478.2627293600052	NaN	0	478.2626037597656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_AVRC(Carbamidomethyl (C))LHSL_	ENSG00000114098|ENST00000469044|ARMC8;ENST00000460495.5_1_3:137956301-138014731:+|nuORF;nc|ENSG00000114098|Q8IUR7-2|ARMC8;nc|ENSG00000114098|Q8IUR7-3|ARMC8;nc|ENSG00000114098|Q8IUR7-7|ARMC8;nc|ENSG00000114098|Q8IUR7-8|ARMC8	25.450171626174864	1.7418937515398478	6				NaN	NaN	0	NaN	633	2291	2922
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2927	13.037	NaN	712.87	30	0	97.435	0.106				-1	STCKGCMEK	9	37	550.7301635742188	NaN	0	550.7301635742188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C)	_STC(Carbamidomethyl (C))KGC(Carbamidomethyl (C))MEK_	ENSG00000143799|ENST00000366794|PARP1;PARP1|p.E360Rfs*29|1|0.22|ENSG00000143799|chr1:226383118-226383119|-/G|frameshift_variant;PARP1|p.K352Nfs*29|1|0.12|ENSG00000143799|chr1:226383139-226383139|T/-|frameshift_variant;PARP1|p.S507Afs*17|2|0.28|ENSG00000143799|chr1:226379946-226379946|T/-|frameshift_variant;PARP1|p.T799Lfs*41|1|0.39|ENSG00000143799|chr1:226367491-226367491|T/-|frameshift_variant	35.15202426646627	0.3000918603816441	6				NaN	NaN	0	NaN	634	2291	2922
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2928	13.039	NaN	1623.4	30	0	485.36	0.037			+	21298	KLSATPNIKK	10	34	367.23239617851505	NaN	0	367.2323913574219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KLSATPNIKK_	REV__ENSG00000248905|ENST00000616417|FMN1;REV__nc|ENSG00000248905|Q68DA7-5|FMN1	22.579656572578934	0.4201028297492154	6				NaN	NaN	0	NaN	635	2291	2922
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2929	13.04	NaN	522.35	30	0	93.527	0.142	+			8724	EEEKKKRLQ	9	27	594.34130859375	NaN	0	594.34130859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EEEKKKRLQ_	ENSG00000036473|ENST00000039007|OTC;OTC|p.A280V|1|0.49|ENSG00000036473|chrX:38408997-38408997|C/T|missense_variant	51.19269402634007	0.19847346126499396	6				NaN	NaN	0	NaN	636	2291	2922
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2944	13.073	NaN	7015.4	30	0	1962.7	0.214	+			20913	KITNHPSNK	9	71	519.7876482556078	1037.5607435780155	2	519.78857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KITNHPSNK_	ENSG00000071655|ENST00000434436|MBD3;ENST00000590830.5_1_19:1578341-1584901:-|nuORF;nc|ENSG00000071655|O95983-2|MBD3	80.45461616416974	0.09558281504443908	6				NaN	NaN	0	NaN	648	2294	2943
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2945	13.077	NaN	24599	30	0	4921.6	0.106			+	17213	HVGRKTAEI	9	82	505.7903281794964	1009.5661034257928	2	505.7907409667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HVGRKTAEI_	REV__tr|U7SXH2|U7SXH2_FUSNUAlanineracemaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00954PE=3SV=1	87.69643885390035	0.07135982304947239	6				NaN	NaN	0	NaN	649	2294	2943
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2946	13.079	NaN	4712.7	30	0	1790	0.106	+			18101	IKTQLAQHK	9	67	533.8219904090643	1065.6294278849284	2	533.82275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IKTQLAQHK_	DST|p.K5076Nfs*24|1|0.31|ENSG00000151914|chr6:56472218-56472218|T/-|frameshift_variant;ENSG00000151914|ENST00000680361|DST;ENST00000487754.2_1_6:56350034-56354383:-|nuORF;nc|ENSG00000151914|Q03001-14|DST;nc|ENSG00000151914|Q03001-8|DST;nc|ENSG00000151914|Q03001|DST	69.6276240434122	0.14239879520340665	6				NaN	NaN	0	NaN	650	2294	2943
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2947	13.08	NaN	12924	30	0	2923.4	0.106			+	15724	GVRSHLTLQ	9	81	337.5291607674659	1009.5656529025978	3	337.52960205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GVRSHLTLQ_	REV__ENST00000373001.3_1_1:39304950-39305250:-|nuORF	41.42661286455405	0.403525789677298	6				NaN	NaN	0	NaN	651	2294	2943
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2948	13.082	NaN	4695.2	30	0	1064.3	0.106	+			3568	ASTTFGNIVK	10	47	346.52614588309126	1036.5566082494738	3	346.86114501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASTTFGNIVK_	ENST00000461436.1_1_3:152019736-152019862:+|nuORF	28.081489160057373	0.6505064946289502	6				NaN	NaN	0	NaN	652	2294	2943
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2949	13.084	NaN	549.32	30	0	221.53	0.035			+	31288	QIDTSNKPP	9	30	500.2575988769531	NaN	0	500.2575988769531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QIDTSNKPP_	REV__ENSG00000165409|ENST00000298171|TSHR;REV__nc|ENSG00000165409|P16473|TSHR	24.20275056022122	0.35506675290109213	6				NaN	NaN	0	NaN	653	2294	2943
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2950	13.085	NaN	496.25	30	0	122.62	0.139				-1	MNVLLFAPG	9	27	489.2605947808952	NaN	0	489.2616882324219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_M(Oxidation (M))NVLLFAPG_	ENSG00000214160|ENST00000397676|ALG3;ENST00000477959.1_1_3:183962361-183963122:-|nuORF;nc|ENSG00000214160|Q92685-2|ALG3	19.359975847455235	0.3714571876404798	6				NaN	NaN	0	NaN	654	2294	2943
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2967	13.121	NaN	6371.4	30	0	2293.5	0.214	+			22621	KTTTATATPK	10	67	510.28967954233184	1018.5648061514637	2	510.29010009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTTTATATPK_	ENST00000262126.8_1_18:9136811-9136937:+|nuORF	115.23196543181992	0.034063879665207575	6				NaN	NaN	0	NaN	668	2297	2966
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2968	13.124	NaN	74072	30	0	53923	0.106	+			4856	ATPKKTVPK	9	55	485.3075638462568	968.6005747593136	2	485.307861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATPKKTVPK_	ENSG00000166197|ENST00000605788|NOLC1;nc|ENSG00000166197|Q14978-3|NOLC1	122.1759843771914	0.019882474861609503	6				NaN	NaN	0	NaN	669	2297	2966
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2969	13.126	NaN	1988.9	30	0	623.2	0.106	+			24903	LKNKLCSCK	9	32	346.19258172142605	NaN	0	346.19256591796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LKNKLCSCK_	DISC1|p.R735Gfs*12|1|0.33|ENSG00000162946|chr1:232008939-232008939|C/-|frameshift_variant;ENSG00000162946|ENST00000439617|DISC1;ENST00000422590.6_1_1:231829618-232144897:+|nuORF;nc|ENSG00000162946|Q9NRI5-2|DISC1	24.519189625965996	0.35377483217337163	6				NaN	NaN	0	NaN	670	2297	2966
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2970	13.128	NaN	1943.1	30	0	526.13	0.106				-1	SVLLLHLCGE	10	27	380.8753967285156	NaN	0	380.8753967285156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_SVLLLHLC(Carbamidomethyl (C))GE_	ENSG00000115009|ENST00000358813|CCL20;ENST00000489160.1_1_2:228678606-228680285:+|nuORF;nc|ENSG00000115009|P78556-2|CCL20	27.047317107675042	0.41136583337917604	6				NaN	NaN	0	NaN	671	2297	2966
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2971	13.13	NaN	2808.9	30	0	598.17	0.106	+			22286	KTDKQPLQK	9	63	543.3186406440744	1084.6227283549488	2	543.3197021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KTDKQPLQK_	ENSG00000133706|ENST00000394434|LARS1;nc|ENSG00000133706|Q9P2J5-2|LARS1;nc|ENSG00000133706|Q9P2J5-3|LARS1	101.25262130126117	0.03792372629710479	6				NaN	NaN	0	NaN	672	2297	2966
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2972	13.132	NaN	1092.4	30	0	118.72	0.036			+	-1	CLHFISMY	8	39	535.7439575195312	NaN	0	535.7439575195312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_C(Carbamidomethyl (C))LHFISMY_	REV__ENST00000419523.1_1_2:131032269-131032449:+|nuORF	20.481830146152948	1.741893751539848	6				NaN	NaN	0	NaN	673	2297	2966
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2973	13.132	NaN	2401.4	30	0	1335.9	0.142	+			8801	EEKKTHEKL	9	38	571.3133892880986	1140.6122256429971	2	571.3145141601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EEKKTHEKL_	ENSG00000151773|ENST00000444614|CCDC122;ENST00000470137.5_1_13:44398084-44434086:-|nuORF;ENST00000476570.2_1_13:44430578-44443512:-|nuORF;nc|ENSG00000151773|Q5T0U0-2|CCDC122	54.776311868738084	0.25715957988447635	6				NaN	NaN	0	NaN	674	2297	2966
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2991	13.17	NaN	21935	30	0	3541.6	0.214				-1	 	0	80	429.2267064449306	856.4388599566612	2	429.2271423339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	689	2300	2990
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2992	13.173	NaN	9428.6	30	0	1208.4	0.106	+			34277	RTKQYSNT	8	59	333.17289822937045	996.4968652883114	3	333.17340087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RTKQYSNT_	nc|ENSG00000005483|Q8IZD2-6|KMT2E	24.20275056022122	0.7724576178584145	6				NaN	NaN	0	NaN	690	2300	2990
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2993	13.175	NaN	5609	30	0	3015.8	0.106				-1	 	0	50	496.29839090732173	990.5822288814435	2	496.29876708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	691	2300	2990
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2994	13.177	NaN	20045	30	0	5887.3	0.106				-1	 	0	51	339.1764410639209	1014.5074937919627	3	339.17694091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	692	2300	2990
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2995	13.179	NaN	1343.2	30	0	299.57	0.106	+			40697	SVAVSEKGWR	10	32	373.53515625	NaN	0	373.53515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVAVSEKGWR_	ENSG00000103248|ENST00000360900|MTHFSD;MTHFSD|p.P294Lfs*26|1|0.15|ENSG00000103248|chr16:86532282-86532282|G/-|frameshift_variant;nc|ENSG00000103248|Q2M296-2|MTHFSD;nc|ENSG00000103248|Q2M296-3|MTHFSD;nc|ENSG00000103248|Q2M296-4|MTHFSD	21.9598887501803	0.4201028297492154	6				NaN	NaN	0	NaN	693	2300	2990
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2996	13.181	NaN	4534.1	30	0	608.33	0.036			+	-1	FVMMTPTKP	9	66	534.2690583406404	NaN	0	534.2691040039062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_FVM(Oxidation (M))MTPTKP_	REV__ENSG00000088827|ENST00000344754|SIGLEC1;REV__nc|ENSG00000088827|Q9BZZ2-2|SIGLEC1;REV__nc|ENSG00000088827|Q9BZZ2-3|SIGLEC1	42.396135135203025	0.2590952873412954	6				NaN	NaN	0	NaN	694	2300	2990
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2997	13.181	NaN	7633.8	30	0	1228.1	0.14				-1	 	0	72	513.3444898380766	1024.674426742953	2	513.3451538085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	695	2300	2990
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3015	13.219	NaN	12278	30	0	1642.8	0.214				-1	 	0	73	443.22438019540954	884.4342074576191	2	443.2247009277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	710	2303	3014
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3016	13.223	NaN	41910	30	0	7838.6	0.106			+	21139	KKSSHSVKK	9	89	514.8138964191822	1027.6132399051644	2	514.8143310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KKSSHSVKK_	REV__ENSG00000116731|ENST00000311066|PRDM2;REV__nc|ENSG00000116731|Q13029-2|PRDM2;REV__nc|ENSG00000116731|Q13029-3|PRDM2;REV__nc|ENSG00000116731|Q13029-5|PRDM2;REV__PRDM2|p.P1648Qfs*14|1|0.24|ENSG00000116731|chr1:13782731-13782731|G/-|frameshift_variant	77.31757898189308	0.1091473830098891	6				NaN	NaN	0	NaN	711	2303	3014
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3017	13.225	NaN	37519	30	0	5409	0.106	+			1005	AEKKTKQTL	9	88	523.8135914677968	1045.6126300023934	2	523.8142700195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEKKTKQTL_	ENSG00000165525|ENST00000298310|NEMF;ENST00000556925.5_1_14:50285084-50295410:-|nuORF;ENST00000557380.5_1_14:50292586-50301128:-|nuORF;nc|ENSG00000165525|O60524-3|NEMF;nc|ENSG00000165525|O60524-4|NEMF;nc|ENSG00000165525|O60524-5|NEMF;NEMF|p.K641Rfs*9|1|0.15|ENSG00000165525|chr14:49802721-49802721|T/-|frameshift_variant;NEMF|p.M879*|1|0.12|ENSG00000165525|chr14:49789558-49789558|T/-|frameshift_variant;NEMF|p.M879Nfs*10|1|0.13|ENSG00000165525|chr14:49789557-49789558|-/T|frameshift_variant	176.44474024533739	0.0016668318535579616	6				NaN	NaN	0	NaN	712	2303	3014
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3018	13.227	NaN	3093.8	30	0	479.87	0.106	+			23821	LCRYTPRR	8	69	532.7908874187802	1063.5672219043604	2	533.2884521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LCRYTPRR_	ENSG00000196419|ENST00000360079|XRCC6;ENST00000435236.2_1_X:98974480-98975440:-|nuORF;nc|ENSG00000196419|P12956-2|XRCC6;XRCC6|p.H486Pfs*12|1|0.12|ENSG00000196419|chr22:41658287-41658287|A/-|frameshift_variant	30.503639358989545	0.7238069182250283	6				NaN	NaN	0	NaN	713	2303	3014
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3019	13.229	NaN	33927	30	0	6738.4	0.106	+			14031	GSGKEKKVLT	10	77	349.5445713108403	1045.611884532721	3	349.54498291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GSGKEKKVLT_	ENSG00000104472|ENST00000220913|CHRAC1	56.43379154798735	0.3982744522255666	6				NaN	NaN	0	NaN	714	2303	3014
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3020	13.23	NaN	4030.4	30	0	1384.5	0.036			+	40196	STRTEVPSSV	10	30	354.8526042067804	1061.5359832205413	3	354.85235595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STRTEVPSSV_	REV__ENSG00000151746|ENST00000652176|BICD1;REV__nc|ENSG00000151746|Q96G01-3|BICD1;REV__nc|ENSG00000151746|Q96G01-4|BICD1	27.047317107675042	0.6589519614906109	6				NaN	NaN	0	NaN	715	2303	3014
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3021	13.231	NaN	1007.9	30	0	167.72	0.141				-1	CFLEEEKK	8	36	541.7652587890625	NaN	0	541.7652587890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_C(Carbamidomethyl (C))FLEEEKK_	CCDC122|p.T215Dfs*3|1|0.26|ENSG00000151773|chr13:43858811-43858812|-/T|frameshift_variant;ENSG00000151773|ENST00000444614|CCDC122;ENST00000470137.5_1_13:44398084-44434086:-|nuORF;ENST00000476570.2_1_13:44430578-44443512:-|nuORF;nc|ENSG00000151773|Q5T0U0-2|CCDC122	31.954861631926434	1.7418937515398478	6				NaN	NaN	0	NaN	716	2303	3014
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3038	13.268	NaN	13816	30	0	8313.1	0.214	+			23064	KVTLRRYD	8	57	525.8049813924572	1049.5954098517143	2	525.8059692382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVTLRRYD_	ENSG00000197013|ENST00000358491|ZNF429;ZNF429|p.H387Qfs*13|1|0.26|ENSG00000197013|chr19:21537213-21537214|AT/-|frameshift_variant	32.81241826257853	0.7059802730411993	6				NaN	NaN	0	NaN	730	2306	3037
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3039	13.271	NaN	18167	30	0	4850.7	0.106			+	32764	RAQVGGMTLS	10	66	510.26695485638413	1018.5193567795683	2	510.2674560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RAQVGGMTLS_	REV__ENSG00000137936|ENST00000260502|BCAR3;REV__nc|ENSG00000137936|O75815-3|BCAR3	87.75429964447693	0.1439309699732727	6				NaN	NaN	0	NaN	731	2306	3037
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3040	13.273	NaN	1374.3	30	0	211.45	0.106			+	-1	DKLPFKMC	8	42	499.24432373046875	NaN	0	499.24432373046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_DKLPFKM(Oxidation (M))C_	REV__ENST00000394507.5_2_7:91870378-91871424:-|nuORF	31.954861631926434	1.7418937515398478	6				NaN	NaN	0	NaN	732	2306	3037
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3041	13.275	NaN	3911.1	30	0	448.6	0.106				-1	 	0	64	450.7478830869142	899.4812132406284	2	450.74853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	733	2306	3037
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3042	13.277	NaN	19817	30	0	4629.1	0.106	+			40433	STVKENMKK	9	71	355.5298563464976	1063.5677396396927	3	355.530517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STVKENMKK_	ENST00000590996.5_2_17:41329998-41338351:+|nuORF	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	734	2306	3037
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3043	13.279	NaN	3072.7	30	0	2057.3	0.034			+	33972	RSEQAIPL	8	38	457.2581324139083	912.5017118946166	2	457.2585144042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RSEQAIPL_	REV__ENST00000356489.9_1_6:80877424-80881050:+|nuORF;REV__ENST00000369760.8_1_6:80877466-80879537:+|nuORF	29.14955571784316	0.7342621283720113	6				NaN	NaN	0	NaN	735	2306	3037
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3044	13.279	NaN	2610.5	30	0	350.4	0.143				-1	 	0	34	376.5508662708872	1126.6307694128616	3	376.5516357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	736	2306	3037
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3061	13.316	NaN	3492.3	30	0	557.81	0.214	+			40434	STVKENMKK	9	62	532.7908874187802	1063.5672219043604	2	532.7925415039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STVKENMKK_	ENST00000590996.5_2_17:41329998-41338351:+|nuORF	87.69643885390035	0.07135982304947239	6				NaN	NaN	0	NaN	750	2309	3060
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3062	13.32	NaN	8932.4	30	0	2614.6	0.106	+			19478	KASSSLPKK	9	55	473.28955442705626	944.5645559209125	2	473.28973388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KASSSLPKK_	ENSG00000104979|ENST00000588234|C19orf53;ENST00000588858.5_1_19:13886394-13889009:+|nuORF	83.6470233535746	0.08277643980271215	6				NaN	NaN	0	NaN	751	2309	3060
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3063	13.322	NaN	6362.1	30	0	665.88	0.106	+			34160	RTAHNAIEK	9	78	520.2852885631653	1038.5560241931305	2	520.285888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RTAHNAIEK_	ENSG00000072310|ENST00000261646|SREBF1;ENST00000470247.1_1_17:17721556-17722545:-|nuORF;nc|ENSG00000072310|P36956-2|SREBF1;nc|ENSG00000072310|P36956-3|SREBF1;nc|ENSG00000072310|P36956-4|SREBF1;nc|ENSG00000072310|P36956-5|SREBF1;nc|ENSG00000072310|P36956-6|SREBF1	90.14881205920913	0.06444578693273594	6				NaN	NaN	0	NaN	752	2309	3060
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3064	13.323	NaN	1555.7	30	0	246.78	0.106			+	47501	VQIECAVVL	9	46	487.2742513878383	NaN	0	487.27471923828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VQIECAVVL_	REV__ADD1|p.K718Rfs*11|2|0.23|ENSG00000087274|chr4:2928458-2928458|A/-|frameshift_variant;REV__ENSG00000087274|ENST00000683351|ADD1;REV__ENST00000503169.5_1_4:2877642-2906862:+|nuORF;REV__ENST00000506157.1_1_4:2889441-2900342:+|nuORF;REV__ENST00000508684.5_1_4:2877642-2900342:+|nuORF;REV__ENST00000509039.5_1_4:2877642-2901297:+|nuORF;REV__nc|ENSG00000087274|P35611-2|ADD1;REV__nc|ENSG00000087274|P35611-3|ADD1;REV__nc|ENSG00000087274|P35611-4|ADD1;REV__nc|ENSG00000087274|P35611-5|ADD1;REV__nc|ENSG00000087274|P35611-6|ADD1;REV__nc|ENSG00000087274|P35611|ADD1	30.503639358989545	0.3235605894931338	6				NaN	NaN	0	NaN	753	2309	3060
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3065	13.325	NaN	2019.1	30	0	438.53	0.106			+	51047	YLEATFVYL	9	38	559.7908174037467	NaN	0	559.7913818359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YLEATFVYL_	REV__ENSG00000197208|ENST00000200652|SLC22A4;REV__SLC22A4|p.T534Qfs*14|1|0.07|ENSG00000197208|chr5:132343773-132343773|A/-|frameshift_variant;REV__SLC22A4|p.V463Gfs*33|1|0.27|ENSG00000197208|chr5:132335938-132335939|-/G|frameshift_variant	25.57405402267927	0.3484490411150625	6				NaN	NaN	0	NaN	754	2309	3060
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3066	13.327	NaN	889.41	30	0	264.51	0.035	+			14832	GTLKNPPKK	9	40	491.80521314148353	981.5958733497671	2	491.8054504394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTLKNPPKK_	nc|ENSG00000196233|Q96JN0-2|LCOR;nc|ENSG00000196233|Q96JN0|LCOR	51.33545320467046	0.2872990594074956	6				NaN	NaN	0	NaN	755	2309	3060
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3067	13.328	NaN	628.46	30	0	70.73	0.139				-1	MLHALLIK	8	37	477.795654296875	NaN	0	477.795654296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_M(Oxidation (M))LHALLIK_	ENSG00000086758|ENST00000262854|HUWE1;ENST00000218328.12_1_X:53611240-53681066:-|nuORF;HUWE1|p.R1657Mfs*13|1|0.21|ENSG00000086758|chrX:53585043-53585044|-/A|frameshift_variant;nc|ENSG00000086758|Q7Z6Z7-2|HUWE1;nc|ENSG00000086758|Q7Z6Z7-3|HUWE1	31.57888975003103	1.7418937515398478	6				NaN	NaN	0	NaN	756	2309	3060
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3081	13.359	NaN	2098.8	30	0	404.32	0.214	+			23173	KWGLNMKH	8	57	507.269287109375	NaN	0	507.269287109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KWGLNMKH_	ENST00000489193.1_1_3:86062505-86063063:+|nuORF	37.15910966729921	1.7418937515398478	6				NaN	NaN	0	NaN	767	2312	3080
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3082	13.363	NaN	10922	30	0	1612.2	0.106			+	33278	RGKLGSIP	8	63	414.258027213321	826.501501493442	2	414.25848388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RGKLGSIP_	REV__ENST00000537839.5_1_11:62649261-62650080:+|nuORF;REV__ENST00000546253.5_1_11:62649261-62650084:+|nuORF	25.450171626174864	0.7628259754767981	6				NaN	NaN	0	NaN	768	2312	3080
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3083	13.365	NaN	5248.3	30	0	1734.3	0.106	+			22613	KTTQDVKK	8	62	474.27894468171354	946.5433364302271	2	474.279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KTTQDVKK_	CCNE2|p.R42Efs*38|1|0.07|ENSG00000175305|chr8:94893932-94893932|T/-|frameshift_variant;ENSG00000175305|ENST00000308108|CCNE2;ENST00000517487.5_1_8:95906073-95906449:-|nuORF;nc|ENSG00000175305|O96020-2|CCNE2	87.69643885390035	0.28444366722805053	6				NaN	NaN	0	NaN	769	2312	3080
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3084	13.366	NaN	6697.8	30	0	1087.9	0.106	+			3090	ASGGAKELK	9	61	430.7449894240961	859.4754259149922	2	430.7454528808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASGGAKELK_	ENSG00000197102|ENST00000360184|DYNC1H1;ENST00000555062.1_1_14:102514125-102516009:+|nuORF	112.41091882917199	0.026537921851008135	6				NaN	NaN	0	NaN	770	2312	3080
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3085	13.368	NaN	1757.8	30	0	395.38	0.106			+	21764	KQQRQRKK	8	49	550.34581169636	NaN	0	550.3460083007812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KQQRQRKK_	REV__ENSG00000164880|ENST00000404767|INTS1;REV__ENST00000468115.1_1_7:1523234-1533501:-|nuORF	30.503639358989545	1.7418937515398478	6				NaN	NaN	0	NaN	771	2312	3080
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3086	13.37	NaN	8157.6	30	0	1146.4	0.038			+	-1	QSVCRGHPGCV	11	73	600.2724571225165	1198.5303613118328	2	600.2735595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_QSVCRGHPGC(Carbamidomethyl (C))V_	REV__ENSG00000184916|ENST00000331782|JAG2;REV__JAG2|p.G741Afs*21|5|0.27|ENSG00000184916|chr14:105148144-105148144|G/-|frameshift_variant;REV__nc|ENSG00000184916|Q9Y219-2|JAG2	58.22992032128504	0.3392555181951113	6				NaN	NaN	0	NaN	772	2312	3080
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3087	13.371	NaN	2697.7	30	0	671.24	0.144			+	-1	SSKKFYMGP	9	39	354.17753187982737	NaN	0	354.1775207519531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_SSKKFYM(Oxidation (M))GP_	REV__RAD9B|p.A305Gfs*25|1|0.3|ENSG00000151164|chr12:110522190-110522191|-/A|frameshift_variant	25.57405402267927	0.3484490411150625	6				NaN	NaN	0	NaN	773	2312	3080
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3102	13.403	NaN	13639	30	0	5515.2	0.214				-1	STNFSLCQSV	10	66	381.5107685647116	NaN	0	381.5107727050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_STNFSLC(Carbamidomethyl (C))QSV_	ENST00000565611.5_1_15:42740870-42749504:-|nuORF	42.86426827375447	0.3507156137006061	6				NaN	NaN	0	NaN	785	2315	3101
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3103	13.407	NaN	5896.9	30	0	2116.4	0.106				-1	MGKLVGPCR	9	57	509.2698531563115	NaN	0	509.2702941894531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_MGKLVGPC(Carbamidomethyl (C))R_	nc|ENSG00000122136|Q9NY56-2|OBP2A	47.91560031466742	0.22105767942158736	6				NaN	NaN	0	NaN	786	2315	3101
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3104	13.409	NaN	22757	30	0	5851.3	0.106				-1	 	0	71	414.88174111298565	1241.623393939157	3	414.8822937011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	787	2315	3101
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3105	13.411	NaN	1918	30	0	965.6	0.106				-1	PCWQRLLG	8	22	343.8489339791792	NaN	0	344.1834716796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_PC(Carbamidomethyl (C))WQRLLG_	ANKRD9|p.R257C|1|0.47|ENSG00000156381|chr14:102507121-102507121|G/A|missense_variant	12.959181472943097	1.7418937515398478	6				NaN	NaN	0	NaN	788	2315	3101
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3106	13.412	NaN	2423.4	30	0	471.29	0.106	+			41773	SVSPASAGKRK	11	64	544.313844408119	NaN	0	544.31494140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVSPASAGKRK_	ENSG00000147649|ENST00000336273|MTDH;MTDH|p.K447Rfs*19|1|0.29|ENSG00000147649|chr8:97713722-97713722|A/-|frameshift_variant;MTDH|p.N505Ifs*18|1|0.48|ENSG00000147649|chr8:97719178-97719178|A/-|frameshift_variant	65.15724298150197	0.18331404873678375	6				NaN	NaN	0	NaN	789	2315	3101
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3107	13.414	NaN	666.93	30	0	169.46	0.038			+	-1	PQGRMAMHQQ	10	32	400.51788330078125	NaN	0	400.51788330078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_PQGRMAM(Oxidation (M))HQQ_	REV__ENSG00000132005|ENST00000254325|RFX1;REV__RFX1|p.D621Hfs*20|1|0.23|ENSG00000132005|chr19:13966500-13966522|ACTGCAGGTTCACCATGACGTCG/-|frameshift_variant	33.921630207806714	0.38879399011744475	6				NaN	NaN	0	NaN	790	2315	3101
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3108	13.415	NaN	1386.6	30	0	318.32	0.141			+	32714	RALAQRLKAA	10	38	549.3479875295153	1096.6814221258305	2	549.3491821289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RALAQRLKAA_	REV__CCDC57|p.A501Hfs*12|1|0.38|ENSG00000176155|chr17:82178479-82178479|C/-|frameshift_variant;REV__ENSG00000176155|ENST00000694881|CCDC57;REV__nc|ENSG00000176155|Q2TAC2-2|CCDC57;REV__nc|ENSG00000176155|Q2TAC2|CCDC57	20.94693142431847	0.7087701759873708	6				NaN	NaN	0	NaN	791	2315	3101
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3123	13.447	NaN	8600.8	30	0	1200.3	0.214				-1	 	0	65	480.28453908647015	958.5545252397403	2	480.2849426269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	803	2318	3122
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3124	13.45	NaN	10907	30	0	2609.6	0.106				-1	 	0	73	486.7515200778153	971.4884872224306	2	486.75201416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	804	2318	3122
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3125	13.452	NaN	9169	30	0	2627	0.106				-1	 	0	63	472.2872424335681	942.5599319339362	2	472.2874755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	805	2318	3122
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3126	13.454	NaN	8090.1	30	0	799.56	0.106	+			48023	VSRIADSEK	9	71	502.77131509365387	1003.5280772541078	2	502.77178955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSRIADSEK_	ENSG00000134444|ENST00000644646|RELCH;ENST00000592479.5_1_18:59895775-59902130:+|nuORF;nc|ENSG00000134444|Q9P260-2|RELCH;nc|ENSG00000134444|Q9P260|RELCH	87.69643885390035	0.07135982304947239	6				NaN	NaN	0	NaN	806	2318	3122
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3127	13.456	NaN	2364.9	30	0	590	0.106	+			24909	LKNTTDKK	8	55	474.27894468171354	946.5433364302271	2	475.26885986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LKNTTDKK_	BPTF|p.D2844Afs*20|1|0.08|ENSG00000171634|chr17:67959766-67959767|-/C|frameshift_variant;BPTF|p.K2718Nfs*36|3|0.12|ENSG00000171634|chr17:67948150-67948150|A/-|frameshift_variant;ENSG00000171634|ENST00000306378|BPTF;nc|ENSG00000171634|Q12830-4|BPTF;nc|ENSG00000171634|Q12830|BPTF	47.657333605630114	0.6087971902037268	6				NaN	NaN	0	NaN	807	2318	3122
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3128	13.458	NaN	988.94	30	0	115.86	0.038			+	18073	IKFKEKHQM	9	38	594.8327130031827	NaN	0	594.8328247070312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IKFKEKHQM_	REV__ENST00000437043.7_1_5:96211855-96211888:+|nuORF	42.86426827375447	0.2558691296974908	6				NaN	NaN	0	NaN	808	2318	3122
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3129	13.458	NaN	2861	30	0	324.26	0.141	+			16329	HEKQEKGTL	9	62	535.284660290684	1068.5547676481679	2	535.2857055664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HEKQEKGTL_	ENSG00000121931|ENST00000369763|LRIF1;nc|ENSG00000121931|Q5T3J3-2|LRIF1	96.66504779109242	0.04607440320619715	6				NaN	NaN	0	NaN	809	2318	3122
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3144	13.492	NaN	5645.1	30	0	2767.3	0.214	+			22467	KTLSPRTLQ	9	49	348.5449876226857	NaN	0	348.54498291015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTLSPRTLQ_	ENSG00000148120|ENST00000375315|AOPEP;ENST00000460573.5_1_9:97767442-97823116:+|nuORF;ENST00000463372.5_1_9:97767418-97844994:+|nuORF;ENST00000468164.1_1_9:97818730-97844994:+|nuORF;nc|ENSG00000148120|Q8N6M6-2|AOPEP;nc|ENSG00000148120|Q8N6M6-4|AOPEP	45.02220120713402	0.24099765136254067	6				NaN	NaN	0	NaN	821	2321	3143
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3145	13.495	NaN	5472.9	30	0	1286.7	0.106	+			22466	KTLSPRTLQ	9	68	522.3133747712739	1042.6121966093476	2	522.314208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTLSPRTLQ_	ENSG00000148120|ENST00000375315|AOPEP;ENST00000460573.5_1_9:97767442-97823116:+|nuORF;ENST00000463372.5_1_9:97767418-97844994:+|nuORF;ENST00000468164.1_1_9:97818730-97844994:+|nuORF;nc|ENSG00000148120|Q8N6M6-2|AOPEP;nc|ENSG00000148120|Q8N6M6-4|AOPEP	88.17693792209575	0.07000514020414955	6				NaN	NaN	0	NaN	822	2321	3143
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3146	13.497	NaN	9941.8	30	0	1400	0.106				-1	 	0	68	431.76033360878904	861.5061142843781	2	431.76068115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	823	2321	3143
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3147	13.499	NaN	3736.3	30	0	812.05	0.106			+	21783	KQTKTNEQ	8	58	488.755847815252	975.4971426973041	2	488.7561950683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KQTKTNEQ_	REV__nc|ENSG00000114487|Q86VD1-2|MORC1	76.7741389293348	0.3504530765139327	6				NaN	NaN	0	NaN	824	2321	3143
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3148	13.501	NaN	3603.3	30	0	390.1	0.106	+			21629	KPRSPRDSGP	10	61	548.7962787115403	1095.5780044898804	2	548.7971801757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KPRSPRDSGP_	ENSG00000166220|ENST00000456372|TBATA;nc|ENSG00000166220|Q96M53-2|TBATA;nc|ENSG00000166220|Q96M53|TBATA	37.81151784470057	0.569310847604193	6				NaN	NaN	0	NaN	825	2321	3143
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3149	13.503	NaN	1991	30	0	362.12	0.035	+			9415	EKIILEAAL	9	42	500.30633544921875	NaN	0	500.30633544921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EKIILEAAL_	ENSG00000090615|ENST00000450791|GOLGA3;nc|ENSG00000090615|Q08378-2|GOLGA3;nc|ENSG00000090615|Q08378-4|GOLGA3	20.94693142431847	0.3660861156085067	6				NaN	NaN	0	NaN	826	2321	3143
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3150	13.503	NaN	1441	30	0	321.86	0.144				-1	KAFNMKTQL	9	37	366.199951171875	NaN	0	366.199951171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_KAFNM(Oxidation (M))KTQL_	ENSG00000198393|ENST00000328654|ZNF26	34.172542307311794	0.30503706118289736	6				NaN	NaN	0	NaN	827	2321	3143
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3164	13.535	NaN	2454.7	30	0	204.07	0.214	+			10087	ESKQSLNK	8	62	467.2530822753906	NaN	0	467.2530822753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ESKQSLNK_	ENSG00000111837|ENST00000354489|MAK;MAK|p.N378Kfs*5|1|0.26|ENSG00000111837|chr6:10796007-10796008|-/T|frameshift_variant;nc|ENSG00000111837|P20794-3|MAK;nc|ENSG00000111837|P20794|MAK	66.42927471994793	1.7418937515398478	6				NaN	NaN	0	NaN	838	2324	3163
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3165	13.538	NaN	1847.8	30	0	268.85	0.106	+			22694	KVAGRIHAK	9	46	490.31129208385323	NaN	0	490.3112487792969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVAGRIHAK_	ENSG00000065427|ENST00000302445|KARS1;ENST00000451871.1_1_13:42499863-42500601:+|nuORF;ENST00000566560.5_1_16:75668010-75682538:-|nuORF;nc|ENSG00000065427|Q15046-2|KARS1	42.396135135203025	0.2590952873412954	6				NaN	NaN	0	NaN	839	2324	3163
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3166	13.54	NaN	6993.7	30	0	519.52	0.106	+			48944	VVEKPQPKK	9	70	526.8261407085939	1051.6377284839878	2	526.8272705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVEKPQPKK_	ENSG00000197622|ENST00000357235|CDC42SE1	93.1432384553994	0.056003526918089595	6				NaN	NaN	0	NaN	840	2324	3163
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3167	13.542	NaN	1205.3	30	0	176.04	0.106			+	45786	VAGKSRWD	8	40	459.74298095703125	NaN	0	459.74298095703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VAGKSRWD_	REV__ENSG00000174080|ENST00000310325|CTSF;REV__ENST00000527141.5_1_11:66331945-66334941:-|nuORF;REV__ENST00000529199.1_1_11:66333209-66333615:-|nuORF	65.80317337860623	1.7418937515398478	6				NaN	NaN	0	NaN	841	2324	3163
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3168	13.544	NaN	1096.8	30	0	232.8	0.106			+	45346	TVSQGLKLK	9	41	325.206298828125	NaN	0	325.206298828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TVSQGLKLK_	REV__ARF6|p.Y31H|1|0.4|ENSG00000165527|chr14:49893827-49893827|T/C|missense_variant;REV__ENSG00000165527|ENST00000298316|ARF6	20.94693142431847	0.3660861156085067	6				NaN	NaN	0	NaN	842	2324	3163
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3169	13.546	NaN	1764.1	30	0	306.76	0.106	+			31404	QKKTKNKK	8	47	501.824466922787	NaN	0	501.823974609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QKKTKNKK_	AluSz_dup51341|chrX:2933079-2933388:+|1.2424955673970632|0.1832918428787378|2.76|472.0|6|2|sense;nc|ENSG00000124831|Q32MZ4-2|LRRFIP1;nc|ENSG00000124831|Q32MZ4-3|LRRFIP1;nc|ENSG00000124831|Q32MZ4|LRRFIP1	60.97194046774394	1.7418937515398478	6				NaN	NaN	0	NaN	843	2324	3163
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3170	13.547	NaN	798.8	30	0	73.55	0.036	+			20296	KEPLIPIQE	9	52	533.8094482421875	NaN	0	533.8094482421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KEPLIPIQE_	nc|ENSG00000135636|O75923-11|DYSF;nc|ENSG00000135636|O75923-14|DYSF;nc|ENSG00000135636|O75923-15|DYSF;nc|ENSG00000135636|O75923-2|DYSF;nc|ENSG00000135636|O75923-3|DYSF;nc|ENSG00000135636|O75923-5|DYSF;nc|ENSG00000135636|O75923-8|DYSF;nc|ENSG00000135636|O75923-9|DYSF;nc|ENSG00000135636|O75923|DYSF	36.446750945000026	0.29355505452396785	6				NaN	NaN	0	NaN	844	2324	3163
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3187	13.583	NaN	3499.9	30	0	285.25	0.214			+	-1	LLSVCSAPR	9	73	522.7803533957407	1043.5461538582813	2	522.7814331054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))LLSVC(Carbamidomethyl (C))SAPR_	REV__ENSG00000212935|ENST00000391620|KRTAP10-3;REV__ENSG00000215454|ENST00000400374|KRTAP10-4;REV__ENSG00000215455|ENST00000400375|KRTAP10-1;REV__ENSG00000241123|ENST00000400372|KRTAP10-5;REV__ENSG00000243489|ENST00000334670|KRTAP10-11;REV__ENSG00000272804|ENST00000609664|KRTAP10-7;REV__KRTAP10-5|p.R263H|1|0.15|ENSG00000241123|chr21:44579791-44579791|C/T|missense_variant	56.72105179125745	0.24094814563026265	6				NaN	NaN	0	NaN	858	2327	3186
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3188	13.586	NaN	3160.4	30	0	733.35	0.106	+			19296	KAGAAARTP	9	48	421.7452695883171	841.4759862434342	2	421.7456359863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KAGAAARTP_	ENSG00000183248|ENST00000618550|PRR36;nc|ENSG00000183248|Q9H6K5-2|PRR36	53.351449002276354	0.2690372970092375	6				NaN	NaN	0	NaN	859	2327	3186
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3189	13.588	NaN	9830.8	30	0	1774.6	0.106	+			22267	KTATAVAHCK	10	72	515.2784047048558	1028.5422564765115	2	515.2796630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KTATAVAHCK_	chr19:39435705-39435848|468|276.17|0.0|24.72|-|0|RPS16,RPS16|1;ENSG00000105193|ENST00000251453|RPS16;ENST00000601390.1_1_19:39926180-39926535:-|nuORF	110.54063921016906	0.04639402190081153	6				NaN	NaN	0	NaN	860	2327	3186
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3190	13.59	NaN	863.81	30	0	152.62	0.106	+			44421	TSLRLKDE	8	42	481.2688293457031	NaN	0	481.2688293457031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TSLRLKDE_	ENSG00000131242|ENST00000621161|RAB11FIP4;nc|ENSG00000131242|Q86YS3-2|RAB11FIP4	37.15910966729921	1.7418937515398478	6				NaN	NaN	0	NaN	861	2327	3186
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3191	13.592	NaN	561.85	30	0	65.787	0.106	+			20777	KHVHRLLMS	9	30	560.8236083984375	NaN	0	560.8236083984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KHVHRLLMS_	ENST00000540670.6_1_19:5720433-5720526:-|nuORF	21.9598887501803	0.3626577482100488	6				NaN	NaN	0	NaN	862	2327	3186
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3192	13.594	NaN	1549.8	30	0	324.52	0.036			+	18061	IIWLNPDVK	9	39	549.3199387626337	NaN	0	549.30078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IIWLNPDVK_	REV__ENSG00000142606|ENST00000378412|MMEL1;REV__nc|ENSG00000142606|Q495T6-2|MMEL1;REV__nc|ENSG00000142606|Q495T6-3|MMEL1	49.536043120802724	0.20989033510253738	6				NaN	NaN	0	NaN	863	2327	3186
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3193	13.594	NaN	338.87	30	0	34.999	0.14			+	-1	IFCRNKLG	8	25	504.277587890625	NaN	0	504.277587890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_IFC(Carbamidomethyl (C))RNKLG_	REV__ENST00000281017.7_2_2:669456-669516:-|nuORF	13.775330524044264	1.7418937515398478	6				NaN	NaN	0	NaN	864	2327	3186
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3210	13.631	NaN	11197	30	0	948.28	0.214	+			40462	STVRQNVNK	9	77	523.2903165271626	1044.5660801211252	2	523.2910766601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STVRQNVNK_	ENSG00000092208|ENST00000308317|GEMIN2;ENST00000418195.1_1_3:42018516-42019344:+|nuORF;ENST00000525430.1_1_14:39583533-39591807:+|nuORF;nc|ENSG00000092208|O14893-2|GEMIN2;nc|ENSG00000092208|O14893-3|GEMIN2;nc|ENSG00000092208|O14893|GEMIN2	77.31757898189308	0.1091473830098891	6				NaN	NaN	0	NaN	878	2330	3209
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3211	13.635	NaN	9793.5	30	0	2137.5	0.106	+			49186	VVMRDPNTK	9	62	538.281177453222	1074.5478019732438	2	538.2821655273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_VVM(Oxidation (M))RDPNTK_	chr12:54282662-54282800|482|460.96|0.0|25.46|+|ENST00000677249|HNRNPA1,HNRNPA1;ENSG00000135486|ENST00000340913|HNRNPA1;ENSG00000139675|ENST00000357495|HNRNPA1L2;ENSG00000224578|ENST00000565308|HNRNPA1L3;ENST00000441603.1_1_11:5593122-5593311:-|nuORF;ENST00000452488.1_1_2:41383770-41384067:+|nuORF;ENST00000457695.2_1_X:100110922-100111255:-|nuORF;ENST00000575692.1_1_17:2210089-2210875:+|nuORF;nc|ENSG00000135486|P09651-2|HNRNPA1;nc|ENSG00000135486|P09651-3|HNRNPA1	77.31757898189308	0.1091473830098891	6				NaN	NaN	0	NaN	879	2330	3209
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3212	13.637	NaN	7725.2	30	0	3468	0.106	+			41401	SVMREGRQK	9	62	545.7915231667882	1089.5684934003764	2	545.79345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVMREGRQK_	ENSG00000135763|ENST00000258243|URB2	47.95952297671804	0.32689736945648856	6				NaN	NaN	0	NaN	880	2330	3209
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3213	13.639	NaN	6576	30	0	1722	0.106				-1	 	0	66	431.2186422299424	860.4227315266849	2	431.21905517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	881	2330	3209
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3214	13.64	NaN	2088.3	30	0	586.14	0.106	+			22268	KTATAVAHCK	10	39	343.854658846017	1028.542147138251	3	343.8550720214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KTATAVAHCK_	chr19:39435705-39435848|468|276.17|0.0|24.72|-|0|RPS16,RPS16|1;ENSG00000105193|ENST00000251453|RPS16;ENST00000601390.1_1_19:39926180-39926535:-|nuORF	47.227680397652996	0.4825456260682108	6				NaN	NaN	0	NaN	882	2330	3209
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3215	13.642	NaN	4352.6	30	0	698.32	0.036			+	-1	ATRPCGRKE	9	45	358.85292026091975	1073.5369313829592	3	358.52056884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_ATRPC(Carbamidomethyl (C))GRKE_	REV__ENSG00000141002|ENST00000263346|TCF25;REV__ENST00000563636.5_1_16:89961526-89967207:+|nuORF;REV__ENST00000566158.5_1_16:89962405-89965058:+|nuORF;REV__ENST00000570116.6_1_16:89962405-89970614:+|nuORF;REV__TCF25|p.S448Lfs*3|1|0.21|ENSG00000141002|chr16:89900755-89900755|T/-|frameshift_variant	30.317721548370564	0.5199124245378496	6				NaN	NaN	0	NaN	883	2330	3209
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3216	13.643	NaN	904.69	30	0	216.16	0.14	+			8852	EEPALRGAR	9	40	499.7725524902344	NaN	0	499.7725524902344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EEPALRGAR_	ENST00000322428.9_1_8:145159507-145160549:+|nuORF	27.882242232435846	0.3367954786602879	6				NaN	NaN	0	NaN	884	2330	3209
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3234	13.681	NaN	31714	30	0	17785	0.214	+			41471	SVNQGQNIHRK	11	66	427.5648745248743	1279.672794174823	3	427.5653991699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVNQGQNIHRK_	CFTR|p.E1044Dfs*20|1|0.04|ENSG00000001626|chr7:117610661-117610662|-/TCAAAGAAAAC|frameshift_variant;CFTR|p.G1208Afs*3|1|0.3|ENSG00000001626|chr7:117627672-117627672|G/-|frameshift_variant;CFTR|p.L1258Ffs*7|1|0.26|ENSG00000001626|chr7:117642487-117642488|-/T|frameshift_variant;CFTR|p.S1297Lfs*31|1|0.28|ENSG00000001626|chr7:117652852-117652852|T/-|frameshift_variant;ENSG00000001626|ENST00000003084|CFTR;nc|ENSG00000001626|P13569-2|CFTR	45.908116695636124	0.4771019740774998	6				NaN	NaN	0	NaN	899	2333	3233
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3235	13.684	NaN	32020	30	0	14929	0.106				-1	 	0	50	412.69801902557253	823.3814851179451	2	412.6983947753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	900	2333	3233
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3236	13.686	NaN	12023	30	0	2856.6	0.106				-1	MIPPMTPGPGA	11	61	362.1767293653745	1083.5083586963235	3	362.17718505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_MIPPM(Oxidation (M))TPGPGA_	PXDN|p.N865Mfs*25|3|0.42|ENSG00000130508|chr2:1649188-1649188|G/-|frameshift_variant	30.568863376406313	0.6691487505135859	6				NaN	NaN	0	NaN	901	2333	3233
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3237	13.688	NaN	3135.2	30	0	442.21	0.106	+			18538	ISLRTTALE	9	66	502.29289196032033	NaN	0	502.29302978515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ISLRTTALE_	ENSG00000099308|ENST00000687212|MAST3;nc|ENSG00000099308|O60307|MAST3	80.45461616416974	0.0698259577396595	6				NaN	NaN	0	NaN	902	2333	3233
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3238	13.69	NaN	3733.4	30	0	1079.9	0.106			+	33239	RGAATGRRL	9	52	479.28818847048217	956.5618240077644	2	479.28857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RGAATGRRL_	REV__ENST00000504183.1_1_5:71403304-71411655:+|nuORF	34.172542307311794	0.4838870758800184	6				NaN	NaN	0	NaN	903	2333	3233
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3239	13.692	NaN	1463.5	30	0	199.5	0.035			+	37244	SKTLEGELR	9	60	516.7868925372155	NaN	0	516.787841796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SKTLEGELR_	REV__ENST00000552221.1_1_12:108941677-108954930:-|nuORF	36.446750945000026	0.29355505452396785	6				NaN	NaN	0	NaN	904	2333	3233
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3240	13.692	NaN	2404.5	30	0	600.68	0.144			+	45935	VAREKKGEK	9	35	348.8764858033972	1043.6076280103916	3	348.8768615722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VAREKKGEK_	REV__ENSG00000117528|ENST00000370214|ABCD3;REV__nc|ENSG00000117528|P28288-2|ABCD3;REV__nc|ENSG00000117528|P28288-3|ABCD3	30.503639358989545	0.5181749237905803	6				NaN	NaN	0	NaN	905	2333	3233
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3255	13.726	NaN	115330	30	0	35539	0.214				-1	 	0	104	438.7606146283608	875.5066763235217	2	438.76092529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	917	2336	3254
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3256	13.729	NaN	4558	30	0	1169.4	0.106			+	43350	TGCKRTRGR	9	49	345.5262716669682	1033.5569856011048	3	345.5268249511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TGCKRTRGR_	REV__ENST00000248248.7_1_16:77225030-77225147:+|nuORF	30.317721548370564	0.5199124245378496	6				NaN	NaN	0	NaN	918	2336	3254
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3257	13.731	NaN	5030.6	30	0	1359.9	0.106	+			3759	ATAEKCLHK	9	60	529.2761028172554	1056.5376527013107	2	529.277099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_ATAEKC(Carbamidomethyl (C))LHK_	ENSG00000180098|ENST00000373830|TRNAU1AP;ENST00000464880.5_1_1:28879622-28887433:+|nuORF;ENST00000480930.5_1_1:28879622-28887666:+|nuORF;ENST00000484775.1_1_1:28887181-28904036:+|nuORF;ENST00000491577.5_1_1:28879622-28887259:+|nuORF;ENST00000495995.5_1_1:28880088-28887666:+|nuORF;TRNAU1AP|p.Q222Sfs*29|1|0.24|ENSG00000180098|chr1:28571305-28571305|C/-|frameshift_variant	42.86426827375447	0.38666266728046506	6				NaN	NaN	0	NaN	919	2336	3254
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3258	13.733	NaN	3614.4	30	0	921.59	0.106			+	-1	SLPCARPKE	9	35	353.1867980957031	NaN	0	353.1867980957031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_SLPC(Carbamidomethyl (C))ARPKE_	REV__ENSG00000117400|ENST00000372470|MPL;REV__MPL|p.A444Gfs*39|1|0.21|ENSG00000117400|chr1:43348860-43348861|-/G|frameshift_variant;REV__MPL|p.I330Sfs*39|1|0.41|ENSG00000117400|chr1:43346448-43346448|C/-|frameshift_variant;REV__MPL|p.S137Vfs*29|1|0.21|ENSG00000117400|chr1:43339282-43339282|C/-|frameshift_variant;REV__nc|ENSG00000117400|P40238-2|MPL	28.081489160057373	0.33578952234132536	6				NaN	NaN	0	NaN	920	2336	3254
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3259	13.735	NaN	4273.8	30	0	1254.5	0.106	+			22614	KTTQDVKK	8	61	474.27894468171354	946.5433364302271	2	474.2792663574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KTTQDVKK_	CCNE2|p.R42Efs*38|1|0.07|ENSG00000175305|chr8:94893932-94893932|T/-|frameshift_variant;ENSG00000175305|ENST00000308108|CCNE2;ENST00000517487.5_1_8:95906073-95906449:-|nuORF;nc|ENSG00000175305|O96020-2|CCNE2	77.31757898189308	0.345924878368729	6				NaN	NaN	0	NaN	921	2336	3254
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3260	13.737	NaN	1870.7	30	0	142.3	0.034	+			9848	EPSSQIFK	8	52	468.24348405230944	NaN	0	468.2435302734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EPSSQIFK_	ENST00000481477.5_1_21:37418129-37431186:-|nuORF;nc|ENSG00000185917|Q9NVD3-2|SETD4	47.657333605630114	1.7418937515398478	6				NaN	NaN	0	NaN	922	2336	3254
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3261	13.737	NaN	1387.4	30	0	231.85	0.14			+	-1	QKMKINEK	8	46	517.7871831156858	NaN	0	517.7870483398438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_QKM(Oxidation (M))KINEK_	REV__ENSG00000135968|ENST00000309863|GCC2;REV__GCC2|p.E105Dfs*5|1|0.08|ENSG00000135968|chr2:108469077-108469078|-/TTTATTT|frameshift_variant;REV__GCC2|p.L712Cfs*16|1|0.49|ENSG00000135968|chr2:108471458-108471458|T/-|frameshift_variant;REV__GCC2|p.N174Ifs*10|1|0.04|ENSG00000135968|chr2:108469849-108469850|-/TTTTCAATTTCTTTCACAT|frameshift_variant	54.776311868738084	1.7418937515398478	6				NaN	NaN	0	NaN	923	2336	3254
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3279	13.777	NaN	52096	30	0	24147	0.215	+			20706	KGRGSKHLL	9	83	498.30824396138325	994.6019349895665	2	498.308837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KGRGSKHLL_	ENSG00000272333|ENST00000420124|KMT2B;KMT2B|p.A2538Pfs*76|1|0.42|ENSG00000272333|chr19:35737693-35737693|G/-|frameshift_variant;KMT2B|p.D1589Gfs*89|1|0.28|ENSG00000272333|chr19:35729058-35729059|-/G|frameshift_variant;KMT2B|p.G1879Vfs*16|5|0.4|ENSG00000272333|chr19:35732101-35732101|G/-|frameshift_variant;KMT2B|p.G2123Vfs*30|1|0.34|ENSG00000272333|chr19:35732913-35732913|G/-|frameshift_variant;KMT2B|p.L2136Pfs*17|1|0.27|ENSG00000272333|chr19:35732956-35732956|T/-|frameshift_variant;KMT2B|p.P1821Hfs*74|1|0.36|ENSG00000272333|chr19:35731927-35731927|C/-|frameshift_variant;KMT2B|p.R1911Dfs*23|1|0.18|ENSG00000272333|chr19:35732274-35732274|C/-|frameshift_variant	60.11826168202944	0.21262886028301267	6				NaN	NaN	0	NaN	938	2339	3278
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3280	13.78	NaN	2144	30	0	348.86	0.106	+			10439	EVLGEKKK	8	46	465.78392002476426	929.5532871163285	2	465.7841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EVLGEKKK_	ENSG00000037474|ENST00000264670|NSUN2;ENST00000513888.5_1_5:6600041-6604993:-|nuORF;nc|ENSG00000037474|Q08J23-2|NSUN2;nc|ENSG00000037474|Q08J23-3|NSUN2	37.15910966729921	0.6739408393984688	6				NaN	NaN	0	NaN	939	2339	3278
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3281	13.782	NaN	13618	30	0	3167	0.106				-1	 	0	62	421.7577332722476	841.5009136112952	2	421.7581481933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	940	2339	3278
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3282	13.784	NaN	3464.7	30	0	1053.7	0.106	+			47483	VQDDKHFHK	9	61	577.2906500612695	1152.566747189339	2	577.2916259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VQDDKHFHK_	ENSG00000132953|ENST00000255305|XPO4;XPO4|p.C1022Afs*8|1|0.21|ENSG00000132953|chr13:20787582-20787582|A/-|frameshift_variant	150.81021883065287	0.006680279908938716	6				NaN	NaN	0	NaN	941	2339	3278
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3283	13.786	NaN	8551.1	30	0	3348.8	0.106			+	18219	INGAHWNTLGA	11	59	385.1972106731659	NaN	0	385.19659423828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_INGAHWNTLGA_	REV__ENSG00000115593|ENST00000419482|SMYD1	58.2462437865262	0.24969438890455364	6				NaN	NaN	0	NaN	942	2339	3278
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3284	13.787	NaN	2819.5	30	0	791.73	0.036			+	23059	KVTEWAKAR	9	54	544.8149181598748	1087.6152833865494	2	544.8163452148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KVTEWAKAR_	REV__ENST00000378097.5_1_1:6160202-6160340:+|nuORF	37.81151784470057	0.4459294069877048	6				NaN	NaN	0	NaN	943	2339	3278
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3285	13.788	NaN	3370.2	30	0	478.93	0.146			+	31839	QPSRGTQKFFQ	11	60	441.90056015231795	NaN	0	441.9002990722656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QPSRGTQKFFQ_	REV__ENSG00000148541|ENST00000618804|FAM13C;REV__nc|ENSG00000148541|Q8NE31-3|FAM13C;REV__nc|ENSG00000148541|Q8NE31-4|FAM13C;REV__nc|ENSG00000148541|Q8NE31-5|FAM13C	31.068146907933308	0.4269584437765198	6				NaN	NaN	0	NaN	944	2339	3278
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3303	13.828	NaN	18023	30	0	3946.2	0.194				-1	 	0	71	479.3074082508006	956.6002635684013	2	479.30780029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	959	2342	3302
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3304	13.831	NaN	9256.3	30	0	2256.9	0.106	+			13655	GNAMFVKEQ	9	70	512.2504774199138	1022.4864019066275	2	512.2512817382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GNAMFVKEQ_	ENSG00000196136|ENST00000393078|SERPINA3;nc|ENSG00000196136|P01011-2|SERPINA3	56.43379154798735	0.2433427591689151	6				NaN	NaN	0	NaN	960	2342	3302
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3305	13.833	NaN	5882.4	30	0	1493.4	0.106				-1	 	0	55	383.7136163792862	765.4126798253724	2	383.7137451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	961	2342	3302
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3306	13.835	NaN	2265.4	30	0	298.9	0.106			+	32446	QVISHEKPQ	9	62	533.2884411211841	NaN	0	533.288330078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QVISHEKPQ_	REV__ENSG00000179165|ENST00000454782|PXT1	56.632244143249146	0.1636824227100298	6				NaN	NaN	0	NaN	962	2342	3302
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3307	13.836	NaN	961.7	30	0	315.89	0.106	+			7868	DRHKVPTEK	9	26	555.3067626953125	NaN	0	555.3067626953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DRHKVPTEK_	ENSG00000170832|ENST00000300896|USP32;USP32|p.G1453Afs*14|1|0.37|ENSG00000170832|chr17:60181514-60181514|C/-|frameshift_variant	19.262678746197807	0.3717864909599771	6				NaN	NaN	0	NaN	963	2342	3302
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3308	13.838	NaN	1876.8	30	0	329.9	0.106	+			21002	KKGRQLGP	8	47	442.27638428941077	882.5382156456216	2	442.27667236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KKGRQLGP_	ENST00000438378.2_1_2:132278034-132278601:+|nuORF	47.91560031466742	0.6071945918984287	6				NaN	NaN	0	NaN	964	2342	3302
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3309	13.84	NaN	8380	30	0	899.11	0.034	+			38758	SSLRASTSK	9	69	468.7584916434236	935.5024303536472	2	468.7585144042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSLRASTSK_	ENSG00000137154|ENST00000380394|RPS6;ENST00000397390.3_1_9:19200348-19200429:-|nuORF;ENST00000498815.1_1_9:19376293-19376674:-|nuORF	114.85826248499774	0.024312442104607014	6				NaN	NaN	0	NaN	965	2342	3302
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3325	13.873	NaN	9420.6	30	0	1671	0.214	+			33034	REKANGTTV	9	73	488.26383887058614	974.5131248079723	2	488.2642517089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_REKANGTTV_	ENSG00000037241|ENST00000265100|RPL26L1;ENSG00000161970|ENST00000648839|RPL26;ENST00000584906.5_1_17:8280884-8283916:-|nuORF;ENST00000602923.1_1_11:2356544-2356979:-|nuORF	60.11826168202944	0.21262886028301267	6				NaN	NaN	0	NaN	978	2345	3324
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3326	13.877	NaN	7952	30	0	1333.7	0.106	+			8599	ECGSACVKTC	10	65	500.69732032381694	999.3800877144339	2	500.69830322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ECGSACVKTC_	ENSG00000184956|ENST00000421673|MUC6;MUC6|p.E825Rfs*6|1|0.47|ENSG00000184956|chr11:1026400-1026401|-/G|frameshift_variant;MUC6|p.E825Rfs*87|1|0.38|ENSG00000184956|chr11:1026401-1026401|G/-|frameshift_variant;MUC6|p.N1717Tfs*10|1|0.03|ENSG00000184956|chr11:1017653-1017653|G/-|frameshift_variant;MUC6|p.P1246Lfs*47|1|0.2|ENSG00000184956|chr11:1020161-1020161|G/-|frameshift_variant;MUC6|p.Q524Sfs*57|1|0.11|ENSG00000184956|chr11:1028667-1028667|G/-|frameshift_variant	79.71258880314673	0.19796908725841375	6				NaN	NaN	0	NaN	979	2345	3324
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3327	13.879	NaN	37875	30	0	4190.4	0.106				-1	 	0	86	493.78999003335986	985.5654271335197	2	493.790283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	980	2345	3324
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3328	13.881	NaN	19617	30	0	5039.6	0.106	+			20165	KEKRQEQIA	9	75	565.3192717398413	1128.6239905464824	2	565.3204956054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEKRQEQIA_	ENSG00000137154|ENST00000380394|RPS6;ENST00000393214.2_1_X:73595962-73596157:-|nuORF;ENST00000498815.1_1_9:19376293-19376674:-|nuORF	96.0336014099291	0.047854655524928534	6				NaN	NaN	0	NaN	981	2345	3324
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3329	13.883	NaN	2801.6	30	0	383.09	0.106	+			30761	QDPRACPPG	9	43	470.71831751857457	939.4220821039492	2	470.71875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QDPRACPPG_	SMARCA4|p.P109Rfs*194|1|0.35|ENSG00000127616|chr19:10985372-10985372|C/-|frameshift_variant	26.69291269510374	0.5537881896960711	6				NaN	NaN	0	NaN	982	2345	3324
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3330	13.885	NaN	1966.3	30	0	440.26	0.038	+			5942	AVLKGVHSHKK	11	47	401.91529807236986	1202.7240648173097	3	401.9155578613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AVLKGVHSHKK_	ENSG00000198242|ENST00000422514|RPL23A;ENST00000582736.1_1_17:27047023-27047984:+|nuORF	39.873155843976775	0.5596786644756743	6				NaN	NaN	0	NaN	983	2345	3324
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3331	13.885	NaN	1820.8	30	0	395.68	0.141	+			4103	ATDSEKAVEK	10	53	539.2760825832602	NaN	0	539.2759399414062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATDSEKAVEK_	ENSG00000154305|ENST00000344922|MIA3;ENST00000470521.1_1_1:222791452-222819114:+|nuORF;MIA3|p.E729Nfs*3|1|0.09|ENSG00000154305|chr1:222629403-222629403|A/-|frameshift_variant;MIA3|p.H496Vfs*10|1|0.04|ENSG00000154305|chr1:222628705-222628706|-/GTTTCCC|frameshift_variant;MIA3|p.M993Nfs*3|1|0.25|ENSG00000154305|chr1:222630191-222630192|-/A|frameshift_variant;MIA3|p.N168Kfs*3|1|0.27|ENSG00000154305|chr1:222627716-222627717|-/A|frameshift_variant;MIA3|p.N746Kfs*10|1|0.35|ENSG00000154305|chr1:222629450-222629451|-/A|frameshift_variant;MIA3|p.P1645Yfs*19|1|0.06|ENSG00000154305|chr1:222659963-222659964|-/TATAG|frameshift_variant;MIA3|p.S149_A150insQVS|1|0.06|ENSG00000154305|chr1:222627664-222627665|-/AGCCAAGTG|inframe_insertion;MIA3|p.V974Sfs*4|1|0.36|ENSG00000154305|chr1:222630134-222630135|-/A|frameshift_variant;nc|ENSG00000154305|Q5JRA6-2|MIA3;nc|ENSG00000154305|Q5JRA6-3|MIA3	51.52775601994872	0.29594378441454594	6				NaN	NaN	0	NaN	984	2345	3324
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3349	13.925	NaN	5749.9	30	0	1382.9	0.214	+			48809	VVADKSCEK	9	63	489.74917543862495	977.4837979440499	2	489.7496643066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVADKSCEK_	ENSG00000205220|ENST00000358514|PSMB10;ENST00000575556.1_1_16:67970119-67970555:-|nuORF	93.1432384553994	0.056003526918089595	6				NaN	NaN	0	NaN	999	2348	3348
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3350	13.928	NaN	10173	30	0	929.91	0.106	+			39268	STAQKAIGK	9	71	452.2658492240499	902.5171455148998	2	452.2662048339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STAQKAIGK_	DPYSL3|p.A516Qfs*15|1|0.31|ENSG00000113657|chr5:147395638-147395638|G/-|frameshift_variant;ENSG00000113657|ENST00000343218|DPYSL3;nc|ENSG00000113657|Q14195|DPYSL3	129.42129120953632	0.01549634589885217	6				NaN	NaN	0	NaN	1000	2348	3348
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3351	13.93	NaN	10579	30	0	3113.7	0.106	+			48371	VTHEGSTVEK	10	69	543.7743091207846	1085.534065308369	2	543.7753295898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTHEGSTVEK_	nc|ENSG00000211675|P0CG04|IGLC1;nc|ENSG00000211677|P0DOY2|IGLC2;nc|ENSG00000211679|P0DOY3|IGLC3;nc|ENSG00000211685|A0M8Q6|IGLC7;nc|ENSG00000222037|P0CF74|IGLC6;nc|ENSG00000254709|B9A064|IGLL5	120.63048641472336	0.026439265609364573	6				NaN	NaN	0	NaN	1001	2348	3348
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3352	13.932	NaN	5853.5	30	0	1084.4	0.106			+	891	AEHKIYGKLA	10	36	377.2158571279763	NaN	0	377.2156677246094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEHKIYGKLA_	REV__ENSG00000137804|ENST00000559596|NUSAP1;REV__ENST00000558123.5_1_15:41625112-41672381:+|nuORF;REV__nc|ENSG00000137804|Q9BXS6-2|NUSAP1;REV__nc|ENSG00000137804|Q9BXS6-3|NUSAP1;REV__nc|ENSG00000137804|Q9BXS6-4|NUSAP1;REV__nc|ENSG00000137804|Q9BXS6-5|NUSAP1;REV__nc|ENSG00000137804|Q9BXS6-6|NUSAP1	30.317721548370564	0.4006274431774794	6				NaN	NaN	0	NaN	1002	2348	3348
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3353	13.934	NaN	2008.1	30	0	413.1	0.106				-1	KRTFSSILC	9	49	556.3009984249194	1110.5874439166387	2	556.3021240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_KRTFSSILC(Carbamidomethyl (C))_	ENSG00000175764|ENST00000321582|TTLL11;ENST00000474723.5_1_9:124736354-124752043:-|nuORF;nc|ENSG00000175764|Q8NHH1-2|TTLL11	38.80614096846853	0.43426287593479557	6				NaN	NaN	0	NaN	1003	2348	3348
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3354	13.936	NaN	1969.4	30	0	457.03	0.035	+			18789	ITQRGNVAK	9	39	329.5293884277344	NaN	0	329.5293884277344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ITQRGNVAK_	ENSG00000120742|ENST00000239944|SERP1;ENSG00000151778|ENST00000379179|SERP2	42.86426827375447	0.2558691296974908	6				NaN	NaN	0	NaN	1004	2348	3348
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3355	13.936	NaN	2075.6	30	0	637.82	0.14			+	-1	KGTKLEMQS	9	61	519.2664878679517	1036.5184228027033	2	519.2675170898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_KGTKLEM(Oxidation (M))QS_	REV__ENSG00000149639|ENST00000237536|SOGA1;REV__nc|ENSG00000149639|O94964-1|MTCL2;REV__nc|ENSG00000149639|O94964-4|MTCL2;REV__SOGA1|p.D1221Gfs*26|1|0.3|ENSG00000149639|chr20:36794420-36794421|-/C|frameshift_variant	49.536043120802724	0.308405419312776	6				NaN	NaN	0	NaN	1005	2348	3348
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3371	13.971	NaN	6989.6	30	0	2831.2	0.214	+			4910	ATQKPLVSKK	10	68	550.3448551593015	1098.6751573854028	2	550.3458862304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATQKPLVSKK_	ENSG00000159166|ENST00000391967|LAD1;LAD1|p.G152Afs*67|1|0.17|ENSG00000159166|chr1:201386906-201386906|C/-|frameshift_variant	120.30596017624542	0.026897611020491978	6				NaN	NaN	0	NaN	1018	2351	3370
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3372	13.975	NaN	5258.5	30	0	1096.7	0.106				-1	 	0	64	545.2889225167928	1088.5632921003855	2	545.2899169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1019	2351	3370
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3373	13.977	NaN	2082.6	30	0	682.91	0.106	+			11407	FLPTFCISL	9	51	520.7772119495685	1039.5398709659369	2	520.2978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FLPTFCISL_	ENST00000465224.5_1_2:97494642-97498350:+|nuORF	25.450171626174864	0.5654022654467333	6				NaN	NaN	0	NaN	1020	2351	3370
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3374	13.979	NaN	3119.4	30	0	469.44	0.106			+	-1	PKCYTAKTM	9	60	558.2666139141018	NaN	0	558.2666625976562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_PKC(Carbamidomethyl (C))YTAKTM(Oxidation (M))_	REV__ENSG00000121741|ENST00000610343|ZMYM2;REV__ZMYM2|p.K1044Rfs*33|2|0.56|ENSG00000121741|chr13:20064537-20064537|A/-|frameshift_variant;REV__ZMYM2|p.N1250Ifs*3|2|0.09|ENSG00000121741|chr13:20082954-20082954|A/-|frameshift_variant	34.172542307311794	0.30503706118289736	6				NaN	NaN	0	NaN	1021	2351	3370
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3375	13.981	NaN	2020	30	0	410.87	0.106			+	31906	QQILVGKK	8	49	457.29474018213597	NaN	0	457.2949523925781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QQILVGKK_	REV__SAGE1|p.V876G|1|0.26|ENSG00000181433|chrX:135912809-135912809|T/G|missense_variant	76.84663266511073	1.7418937515398478	6				NaN	NaN	0	NaN	1022	2351	3370
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3376	13.982	NaN	2070.3	30	0	255.9	0.036	+			20736	KGTKKDPNAP	10	56	528.2952560825063	1054.5759592318125	2	528.295654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KGTKKDPNAP_	HMGB2|p.K88T|1|0.3|ENSG00000164104|chr4:173333102-173333102|T/G|missense_variant	60.11826168202944	0.36476464221954025	6				NaN	NaN	0	NaN	1023	2351	3370
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3377	13.983	NaN	1034	30	0	156.61	0.14			+	-1	QMFVVWAL	8	45	505.26252357452836	NaN	0	505.2625732421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_QM(Oxidation (M))FVVWAL_	REV__ENST00000463727.1_1_10:129870415-129870529:+|nuORF	31.57888975003103	1.7418937515398478	6				NaN	NaN	0	NaN	1024	2351	3370
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3394	14.02	NaN	3145.7	30	0	616.49	0.214				-1	 	0	47	341.1869876499286	680.3594223666572	2	341.18743896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1038	2354	3393
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3395	14.024	NaN	8083.4	30	0	1155.2	0.106	+			49296	VVQKKIAEK	9	56	348.2248930659353	1041.652849798006	3	348.22528076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVQKKIAEK_	ENSG00000171045|ENST00000524325|TSNARE1;ENST00000518928.1_1_8:143381726-143407541:-|nuORF;nc|ENSG00000171045|Q96NA8-2|TSNARE1	93.19546047674547	0.05585629608842056	6				NaN	NaN	0	NaN	1039	2354	3393
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3396	14.026	NaN	2381.5	30	0	650.01	0.106	+			15176	GTSGPHVGK	9	45	420.2219304118622	838.4293078905245	2	420.22210693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTSGPHVGK_	ENSG00000111859|ENST00000379446|NEDD9;ENST00000448183.6_1_6:11200558-11306280:-|nuORF;nc|ENSG00000111859|Q14511-2|NEDD9;nc|ENSG00000111859|Q14511-3|NEDD9;NEDD9|p.P245Lfs*3|2|0.37|ENSG00000111859|chr6:11191135-11191135|G/-|frameshift_variant	31.529811441608018	0.5085848003137583	6				NaN	NaN	0	NaN	1040	2354	3393
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3397	14.027	NaN	4708.9	30	0	841.68	0.106				-1	TPPALNCATPG	11	53	366.8467061322189	NaN	0	366.9046630859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_TPPALNC(Carbamidomethyl (C))ATPG_	ENST00000414613.1_1_2:61163957-61164086:-|nuORF	27.64392233501311	0.4422187622456888	6				NaN	NaN	0	NaN	1041	2354	3393
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3398	14.029	NaN	665.5	30	0	62.945	0.106				-1	MIGHYLGEFS	10	37	585.2687806604931	NaN	0	585.2687377929688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_M(Oxidation (M))IGHYLGEFS_	ENSG00000115268|ENST00000592588|RPS15;ENST00000586096.3_1_19:1440314-1440458:+|nuORF	45.9519527083369	0.331194823726099	6				NaN	NaN	0	NaN	1042	2354	3393
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3399	14.031	NaN	3409.4	30	0	1368.3	0.036			+	23460	LAEELGRIR	9	35	352.8763101481302	1055.6071010445905	3	352.87701416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LAEELGRIR_	REV__ENSG00000089847|ENST00000318934|ANKRD24;REV__nc|ENSG00000089847|Q8TF21-2|ANKRD24	25.450171626174864	0.5654022654467333	6				NaN	NaN	0	NaN	1043	2354	3393
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3400	14.032	NaN	5147.4	30	0	1200.2	0.139	+			15025	GTNHPDVAK	9	62	469.73762212399237	937.4606913147848	2	469.73779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GTNHPDVAK_	ENSG00000137171|ENST00000347162|KLC4;ENST00000467906.5_1_6:43030654-43039600:+|nuORF;nc|ENSG00000137171|Q9NSK0-3|KLC4;nc|ENSG00000137171|Q9NSK0-5|KLC4	126.24258497203832	0.01742065577488747	6				NaN	NaN	0	NaN	1044	2354	3393
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3416	14.067	NaN	28074	30	0	3747.5	0.214	+			16345	HELARKTEG	9	89	520.7772119495685	1039.5398709659369	2	520.7779541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HELARKTEG_	ENSG00000132612|ENST00000254950|VPS4A;ENST00000564399.1_1_16:69355005-69355937:+|nuORF	113.41158876095287	0.025516849225023126	6				NaN	NaN	0	NaN	1057	2357	3415
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3417	14.07	NaN	57123	30	0	8091.8	0.106				-1	 	0	106	517.7950171159567	1033.5754812987134	2	517.795654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1058	2357	3415
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3418	14.072	NaN	17525	30	0	3978.8	0.106	+			49155	VVMGKQQSK	9	81	502.7809927552078	1003.5474325772157	2	502.7813720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVMGKQQSK_	ENSG00000148225|ENST00000374193|WDR31;nc|ENSG00000148225|Q8NA23-2|WDR31	219.56429443429514	1.5172074221325678E-08	6				NaN	NaN	0	NaN	1059	2357	3415
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3419	14.074	NaN	3798.1	30	0	990.59	0.106	+			4171	ATFIMSLV	8	63	441.2449667100607	880.4753804869214	2	441.2452697753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATFIMSLV_	tr|U7SLK8|U7SLK8_FUSNUPolysaccharidebiosynthesisproteinC-terminaldomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01961PE=4SV=1	40.5726180659479	0.6527593143185008	6				NaN	NaN	0	NaN	1060	2357	3415
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3420	14.076	NaN	1558.6	30	0	425.54	0.106			+	-1	CPLGLCSSLK	10	37	359.8521423339844	NaN	0	359.8521423339844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_CPLGLC(Carbamidomethyl (C))SSLK_	REV__ENSG00000170634|ENST00000607452|ACYP2	26.063383197487333	0.4145965855542893	6				NaN	NaN	0	NaN	1061	2357	3415
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3421	14.078	NaN	15834	30	0	4850.7	0.036			+	31540	QLLHPVCPK	9	67	345.5322745035728	1033.5749941109184	3	345.5327453613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QLLHPVCPK_	REV__ENSG00000147459|ENST00000276440|DOCK5;REV__ENST00000467709.6_1_8:25227083-25246387:+|nuORF	31.954861631926434	0.5046124803899898	6				NaN	NaN	0	NaN	1062	2357	3415
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3422	14.078	NaN	1442	30	0	185.36	0.137	+			42688	TCSEPVVA	8	41	403.1933564931087	NaN	0	403.1933898925781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TCSEPVVA_	ENSG00000169962|ENST00000339381|TAS1R3;TAS1R3|p.H387Sfs*13|1|0.24|ENSG00000169962|chr1:1332688-1332689|-/T|frameshift_variant;TAS1R3|p.L606Wfs*43|1|0.42|ENSG00000169962|chr1:1333711-1333711|G/-|frameshift_variant	28.2542754592877	1.7418937515398478	6				NaN	NaN	0	NaN	1063	2357	3415
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3438	14.114	NaN	9925.3	30	0	1948.3	0.214	+			22360	KTGTLTENK	9	74	496.2740065727478	990.5334602122956	2	496.2745056152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTGTLTENK_	ATP10A|p.K791Rfs*28|1|0.23|ENSG00000206190|chr15:25708273-25708273|T/-|frameshift_variant;ATP10D|p.L1148*|1|0.28|ENSG00000145246|chr4:47576846-47576846|T/-|frameshift_variant;ATP10D|p.L617Cfs*41|2|0.28|ENSG00000145246|chr4:47557681-47557681|G/-|frameshift_variant;ATP10D|p.L863*|1|0.21|ENSG00000145246|chr4:47560990-47560990|T/-|frameshift_variant;ATP10D|p.L863Ffs*3|1|0.28|ENSG00000145246|chr4:47560989-47560990|-/T|frameshift_variant;ENSG00000118322|ENST00000327245|ATP10B;ENSG00000145246|ENST00000273859|ATP10D;ENSG00000206190|ENST00000555815|ATP10A;ENST00000521033.5_1_5:160061154-160212677:-|nuORF;nc|ENSG00000118322|O94823-2|ATP10B;nc|ENSG00000118322|O94823-3|ATP10B;nc|ENSG00000145246|Q9P241-2|ATP10D	120.8684288430529	0.02067403653475984	6				NaN	NaN	0	NaN	1076	2360	3437
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3439	14.117	NaN	7125.8	30	0	1090.5	0.106	+			22634	KTVKDAVQK	9	76	508.8076772951399	1015.6008016570798	2	508.8085021972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTVKDAVQK_	ENSG00000103510|ENST00000219797|KAT8;ENST00000539683.2_1_16:31129164-31131922:+|nuORF;KAT8|p.Y323Tfs*48|1|0.44|ENSG00000103510|chr16:31130315-31130315|C/-|frameshift_variant;nc|ENSG00000103510|Q9H7Z6-2|KAT8	138.06239232086	0.011389075116295402	6				NaN	NaN	0	NaN	1077	2360	3437
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3440	14.119	NaN	9944	30	0	1738.8	0.106				-1	 	0	63	457.27623567307995	912.5379184129599	2	457.27655029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1078	2360	3437
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3441	14.121	NaN	2016.3	30	0	472.33	0.106	+			4356	ATGSANMTK	9	52	440.71275087918065	879.4109488251613	2	440.713134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATGSANMTK_	ENSG00000147059|ENST00000374906|SPIN2A;ENSG00000186787|ENST00000434397|SPIN2B;SPIN2B|p.L82Ifs*3|1|0.16|ENSG00000186787|chrX:57120383-57120386|AAAG/-|frameshift_variant	56.43379154798735	0.2433427591689151	6				NaN	NaN	0	NaN	1079	2360	3437
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3442	14.123	NaN	1113.5	30	0	165.26	0.106	+			5893	AVLAKAKAK	9	45	450.30523681640625	NaN	0	450.30523681640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVLAKAKAK_	ENSG00000165283|ENST00000356493|STOML2;nc|ENSG00000165283|Q9UJZ1-2|STOML2	38.80614096846853	0.28164298475537564	6				NaN	NaN	0	NaN	1080	2360	3437
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3443	14.125	NaN	4838.7	30	0	827.12	0.034				-1	 	0	60	483.77132319063867	965.5280934480774	2	483.77166748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1081	2360	3437
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3444	14.125	NaN	4950.3	30	0	1111.6	0.142	+			19813	KEDEKKQEL	9	67	573.8032544170221	1145.5919559008441	2	573.8036499023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KEDEKKQEL_	ENSG00000138640|ENST00000264344|FAM13A;ENST00000508360.5_1_4:89653076-89671014:-|nuORF;ENST00000511573.5_1_4:89649686-89680064:-|nuORF;nc|ENSG00000138640|O94988-1|FAM13A;nc|ENSG00000138640|O94988-3|FAM13A;nc|ENSG00000138640|O94988-5|FAM13A;nc|ENSG00000138640|O94988-6|FAM13A	160.8219353732433	0.004346709298329381	6				NaN	NaN	0	NaN	1082	2360	3437
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3462	14.165	NaN	24479	30	0	8151.2	0.214			+	-1	QPFQLLCQI	9	72	382.87145325433676	NaN	0	382.8714294433594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_QPFQLLC(Carbamidomethyl (C))QI_	REV__ENST00000520892.5_2_8:141900864-142011029:-|nuORF;REV__ENST00000522684.5_2_8:141900864-142011289:-|nuORF;REV__ENST00000523797.1_1_8:141935746-142011029:-|nuORF;REV__ENST00000523803.5_2_8:141900864-141937456:-|nuORF	39.252832667884924	0.27938773122138094	6				NaN	NaN	0	NaN	1097	2363	3461
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3463	14.168	NaN	4235.1	30	0	2939.8	0.106			+	29622	PGALVMIP	8	33	399.23505943698177	NaN	0	399.2350158691406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PGALVMIP_	REV__ENSG00000082684|ENST00000357599|SEMA5B;REV__nc|ENSG00000082684|Q9P283-2|SEMA5B;REV__nc|ENSG00000082684|Q9P283-3|SEMA5B;REV__nc|ENSG00000082684|Q9P283-4|SEMA5B;REV__SEMA5B|p.Q905Rfs*147|1|0.47|ENSG00000082684|chr3:122912855-122912855|G/-|frameshift_variant;REV__SEMA5B|p.S205Pfs*136|1|0.3|ENSG00000082684|chr3:122928540-122928540|A/-|frameshift_variant	16.704963439144045	1.7418937515398478	6				NaN	NaN	0	NaN	1098	2363	3461
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3464	14.17	NaN	10387	30	0	1803.7	0.106	+			39586	STGQPCILLK	10	69	530.2994069044605	NaN	0	530.2994384765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STGQPCILLK_	ENSG00000101892|ENST00000218008|ATP1B4;nc|ENSG00000101892|Q9UN42-2|ATP1B4	44.377184641726394	0.34115073642966565	6				NaN	NaN	0	NaN	1099	2363	3461
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3465	14.172	NaN	3705.6	30	0	1118.9	0.106	+			22054	KSKELSKQ	8	57	474.27894468171354	946.5433364302271	2	474.27911376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KSKELSKQ_	ENST00000367607.7_2_1:179924016-179959652:+|nuORF	93.19546047674547	0.2677966331495483	6				NaN	NaN	0	NaN	1100	2363	3461
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3466	14.174	NaN	2584.7	30	0	998.12	0.106	+			49339	VVSKGGDK	8	42	395.2267199568228	788.4388869804457	2	395.2267761230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVSKGGDK_	ENSG00000157870|ENST00000419916|PRXL2B;ENST00000493183.5_1_1:2517940-2520863:+|nuORF;nc|ENSG00000157870|Q8TBF2-3|PRXL2B	27.882242232435846	0.7440473649773525	6				NaN	NaN	0	NaN	1101	2363	3461
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3467	14.176	NaN	1064.7	30	0	150.04	0.035	+			4394	ATHPDVQQK	9	40	512.2638892128176	1022.5132254924353	2	512.2645263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATHPDVQQK_	CYP3A7|p.V331Cfs*30|1|0.13|ENSG00000160870|chr7:99710768-99710768|T/-|frameshift_variant;ENSG00000021461|ENST00000354829|CYP3A43;ENSG00000106258|ENST00000222982|CYP3A5;ENSG00000160868|ENST00000651514|CYP3A4;ENSG00000160870|ENST00000336374|CYP3A7;ENSG00000282301|ENST00000620220|CYP3A7-CYP3A51P;nc|ENSG00000021461|Q9HB55-2|CYP3A43;nc|ENSG00000021461|Q9HB55-3|CYP3A43;nc|ENSG00000021461|Q9HB55-6|CYP3A43;nc|ENSG00000160870|P24462-2|CYP3A7	39.252832667884924	0.4290233611298554	6				NaN	NaN	0	NaN	1102	2363	3461
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3468	14.176	NaN	6987.4	30	0	868.96	0.14	+			15620	GVLARVLRE	9	66	506.81600849696594	1011.6174640607319	2	506.8166198730469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GVLARVLRE_	KIFAP3|p.A178V|1|0.29|ENSG00000075945|chr1:170035538-170035538|G/A|missense_variant	53.351449002276354	0.2690372970092375	6				NaN	NaN	0	NaN	1103	2363	3461
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3486	14.216	NaN	11792	30	0	1908.4	0.207	+			20996	KKGKADTGKK	10	61	530.8266318512276	1059.638710769255	2	530.8275146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KKGKADTGKK_	ENST00000398005.3_1_13:59584546-59584735:+|nuORF	102.0615471778698	0.07157459376830236	6				NaN	NaN	0	NaN	1118	2366	3485
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3487	14.219	NaN	13138	30	0	1308.2	0.106	+			39072	SSSRAVVVKK	10	84	354.2205322935201	NaN	0	354.2205505371094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSSRAVVVKK_	CON__H-INV:HIT000292931;CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	61.76455937419982	0.21986853317854868	6				NaN	NaN	0	NaN	1119	2366	3485
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3488	14.221	NaN	48509	30	0	8484.8	0.106	+			34213	RTDTASRLK	9	103	349.86824640363955	1046.5829098111187	3	349.86883544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RTDTASRLK_	ENSG00000054654|ENST00000555002|SYNE2;ENST00000394768.6_2_14:64542710-64692241:+|nuORF;ENST00000554805.6_2_14:64676062-64692241:+|nuORF;ENST00000555022.5_2_14:64671104-64692241:+|nuORF;nc|ENSG00000054654|Q8WXH0-13|SYNE2;nc|ENSG00000054654|Q8WXH0-3|SYNE2;nc|ENSG00000054654|Q8WXH0-4|SYNE2;nc|ENSG00000054654|Q8WXH0-7|SYNE2;nc|ENSG00000054654|Q8WXH0|SYNE2;SYNE2|p.S6651Rfs*83|1|0.29|ENSG00000054654|chr14:64220596-64220597|-/G|frameshift_variant	102.0615471778698	0.03709830720253279	6				NaN	NaN	0	NaN	1120	2366	3485
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3489	14.223	NaN	3473.4	30	0	582.58	0.106	+			16339	HEKTEDNKL	9	70	557.2798589795011	1112.5451650258021	2	557.28076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HEKTEDNKL_	ENSG00000123200|ENST00000679008|ZC3H13;nc|ENSG00000123200|Q5T200|ZC3H13	93.1432384553994	0.056003526918089595	6				NaN	NaN	0	NaN	1121	2366	3485
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3490	14.225	NaN	10459	30	0	1570.8	0.106			+	46778	VGYAIIDS	8	56	419.2214032583895	836.428253583579	2	419.22186279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VGYAIIDS_	REV__ENSG00000110328|ENST00000227756|GALNT18	29.841539824830324	0.7289191502596711	6				NaN	NaN	0	NaN	1122	2366	3485
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3491	14.227	NaN	8040.4	30	0	819.06	0.035			+	21144	KKTDRNGKT	9	76	524.2979916536805	1046.5814303741608	2	524.3010864257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KKTDRNGKT_	REV__L1PA6_dup546|chr2:49227587-49231532:-|4.547726375381561|0.2927699401366612|3.96|483.0|74|3|sense	53.08895987439943	0.27122541748218487	6				NaN	NaN	0	NaN	1123	2366	3485
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3492	14.227	NaN	2400	30	0	335.81	0.145	+			43813	TLPPDAYSHL	10	48	371.8559875488281	NaN	0	371.8559875488281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TLPPDAYSHL_	ENSG00000212123|ENST00000419421|PRR22	33.921630207806714	0.38879399011744475	6				NaN	NaN	0	NaN	1124	2366	3485
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3510	14.267	NaN	18392	30	0	2757.9	0.214	+			35597	SAYRQPVKK	9	67	538.8138318334871	1075.6131107337742	2	538.8145751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAYRQPVKK_	ENST00000473871.1_1_13:37583848-37586479:-|nuORF;nc|ENSG00000102710|Q8NEM7-2|SUPT20H;nc|ENSG00000102710|Q8NEM7-3|SUPT20H	117.5257442709337	0.022697614825424036	6				NaN	NaN	0	NaN	1139	2369	3509
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3511	14.27	NaN	11818	30	0	3565.4	0.106	+			25206	LMKVMKTK	8	63	497.79253958375347	993.570526234307	2	497.79327392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LM(Oxidation (M))KVMKTK_	CENPF|p.S2957Afs*6|1|0.52|ENSG00000117724|chr1:214657310-214657310|A/-|frameshift_variant;CENPF|p.T1974Pfs*11|1|0.22|ENSG00000117724|chr1:214645483-214645483|A/-|frameshift_variant;CENPF|p.T2189Hfs*3|1|0.28|ENSG00000117724|chr1:214646131-214646131|A/-|frameshift_variant;ENSG00000117724|ENST00000366955|CENPF	55.50420428727701	0.5462892107279674	6				NaN	NaN	0	NaN	1140	2369	3509
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3512	14.272	NaN	4299	30	0	439.92	0.106	+			13668	GNSQRKRK	8	67	487.2866826996981	972.5588124661962	2	487.7846984863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GNSQRKRK_	ENST00000434703.5_1_17:70072759-70080101:-|nuORF;ENST00000533996.5_1_17:70072759-70080101:-|nuORF	51.19269402634007	0.5868595481438337	6				NaN	NaN	0	NaN	1141	2369	3509
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3513	14.274	NaN	26423	30	0	3625.8	0.106	+			39385	STDKQTCLK	9	81	540.7706750548953	1079.5267971765904	2	540.7720336914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_STDKQTC(Carbamidomethyl (C))LK_	ENSG00000198788|ENST00000675028|MUC2;nc|ENSG00000198788|Q02817|MUC2	136.98908636845044	0.011892605960677736	6				NaN	NaN	0	NaN	1142	2369	3509
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3514	14.276	NaN	1728.6	30	0	230.83	0.106	+			16239	HEEESGGRSV	10	50	543.7447522964821	NaN	0	543.7448120117188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HEEESGGRSV_	ENSG00000047410|ENST00000367478|TPR	80.45461616416974	0.09722466730825292	6				NaN	NaN	0	NaN	1143	2369	3509
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3515	14.278	NaN	2674.7	30	0	877.71	0.036			+	34662	RVRLADPGGK	10	61	534.8167881353909	1067.6190233375817	2	534.8180541992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RVRLADPGGK_	REV__ENSG00000126217|ENST00000535094|MCF2L;REV__ENST00000469415.1_1_13:113748772-113751170:+|nuORF;REV__ENST00000488765.1_1_13:113750615-113750798:+|nuORF;REV__nc|ENSG00000126217|O15068-10|MCF2L;REV__nc|ENSG00000126217|O15068-2|MCF2L;REV__nc|ENSG00000126217|O15068-3|MCF2L;REV__nc|ENSG00000126217|O15068-5|MCF2L;REV__nc|ENSG00000126217|O15068-6|MCF2L;REV__nc|ENSG00000126217|O15068-8|MCF2L;REV__nc|ENSG00000126217|O15068|MCF2L	24.519189625965996	0.6795976720565101	6				NaN	NaN	0	NaN	1144	2369	3509
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3516	14.278	NaN	1319.9	30	0	126.11	0.14				-1	MFCLIFQK	8	58	523.262451171875	NaN	0	523.262451171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_M(Oxidation (M))FCLIFQK_	ENST00000587942.1_1_18:59774719-59777227:-|nuORF	37.028477286268924	1.7418937515398478	6				NaN	NaN	0	NaN	1145	2369	3509
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3534	14.318	NaN	2461.2	30	0	432.01	0.214	+			48056	VSSKPSTMK	9	57	482.76032193472184	NaN	0	482.7598571777344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSSKPSTMK_	ENSG00000123983|ENST00000357430|ACSL3	56.43379154798735	0.16452882468284893	6				NaN	NaN	0	NaN	1160	2372	3533
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3535	14.321	NaN	12785	30	0	3281.6	0.106	+			39742	STISSNASK	9	72	447.7294169694306	893.4442810056612	2	448.2398376464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STISSNASK_	ENSG00000101166|ENST00000355937|PRELID3B;nc|ENSG00000101166|Q9Y3B1-2|PRELID3B	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	1161	2372	3533
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3536	14.323	NaN	3402.4	30	0	1289.1	0.106				-1	RRAAAYVCN	9	42	360.849520541678	1079.526732225234	3	360.8500671386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_RRAAAYVC(Carbamidomethyl (C))N_	ENSG00000129749|ENST00000250699|CHRNA10	19.996771675451527	0.6112419832031292	6				NaN	NaN	0	NaN	1162	2372	3533
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3537	14.325	NaN	3195.2	30	0	987.51	0.106	+			4187	ATFNFSQKNK	10	41	395.5388975328015	NaN	0	395.53887939453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATFNFSQKNK_	tr|U7SGS6|U7SGS6_FUSNUDNAtopoisomeraseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02306PE=3SV=1	31.634271133179894	0.39630454568332174	6				NaN	NaN	0	NaN	1163	2372	3533
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3538	14.327	NaN	3569.8	30	0	736.37	0.106			+	-1	SVNPMGPKKK	10	44	367.87403241613754	1100.6002678486127	3	367.8741760253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_SVNPM(Oxidation (M))GPKKK_	REV__ENSG00000100393|ENST00000263253|EP300	35.15202426646627	0.5927656479315102	6				NaN	NaN	0	NaN	1164	2372	3533
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3539	14.329	NaN	1380.6	30	0	204.83	0.035			+	10876	FAYNGKKAK	9	53	513.7889208449236	1025.5632887566471	2	513.78759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FAYNGKKAK_	REV__ENSG00000182771|ENST00000327946|GRID1;REV__nc|ENSG00000182771|Q9ULK0-2|GRID1	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	1165	2372	3533
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3540	14.329	NaN	1425.4	30	0	353.13	0.14			+	34144	RSVRDFKK	8	59	518.3057558265697	1034.5969587199393	2	518.30029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RSVRDFKK_	REV__ENSG00000163882|ENST00000456318|POLR2H;REV__nc|ENSG00000163882|P52434-2|POLR2H;REV__nc|ENSG00000163882|P52434-4|POLR2H;REV__POLR2H|p.G19S|1|0.18|ENSG00000163882|chr3:184363547-184363547|G/A|missense_variant	53.351449002276354	0.5676011784961348	6				NaN	NaN	0	NaN	1166	2372	3533
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3558	14.369	NaN	79691	30	0	22955	0.197	+			39743	STISSNASK	9	83	447.7294169694306	893.4442810056612	2	447.72967529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STISSNASK_	ENSG00000101166|ENST00000355937|PRELID3B;nc|ENSG00000101166|Q9Y3B1-2|PRELID3B	182.3913890336628	0.0010559746847940753	6				NaN	NaN	0	NaN	1181	2375	3557
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3559	14.372	NaN	140520	30	0	33813	0.106				-1	 	0	90	525.8184475429642	1049.6223421527284	2	525.8192138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1182	2375	3557
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3560	14.374	NaN	55840	30	0	9226.3	0.106				-1	 	0	88	350.881206753626	1049.621790861078	3	350.8817138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1183	2375	3557
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3561	14.376	NaN	7867.3	30	0	1734.8	0.106			+	8845	EEMSIFHY	8	68	528.2284418286523	1054.4423307241045	2	528.2293701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EEMSIFHY_	REV__MPP1|p.T336M|1|0.2|ENSG00000130830|chrX:154781742-154781742|G/A|missense_variant	44.53106598305862	0.628196326904373	6				NaN	NaN	0	NaN	1184	2375	3557
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3562	14.378	NaN	2908.2	30	0	339.05	0.106	+			19859	KEEKGRQEL	9	69	558.806036935103	1115.5975209370058	2	558.8076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEEKGRQEL_	ENSG00000105357|ENST00000642316|MYH14;MYH14|p.L1950Sfs*14|1|0.34|ENSG00000105357|chr19:50309646-50309646|C/-|frameshift_variant;nc|ENSG00000105357|Q7Z406-4|MYH14;nc|ENSG00000105357|Q7Z406-5|MYH14;nc|ENSG00000105357|Q7Z406-6|MYH14;nc|ENSG00000105357|Q7Z406|MYH14	82.7504851949679	0.08565546331141553	6				NaN	NaN	0	NaN	1185	2375	3557
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3563	14.38	NaN	2105.4	30	0	498.4	0.106	+			141	AAGPVSQGK	9	43	407.72411363684273	813.4336743404855	2	407.72412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AAGPVSQGK_	ENSG00000100393|ENST00000263253|EP300	32.81241826257853	0.4965981579233955	6				NaN	NaN	0	NaN	1186	2375	3557
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3564	14.381	NaN	11783	30	0	1561.1	0.035	+			39079	SSSSKTFEK	9	72	500.7503938212347	999.4862347092694	2	500.7513732910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSSSKTFEK_	ENSG00000112742|ENST00000369798|TTK;nc|ENSG00000112742|P33981-2|TTK;TTK|p.R854Gfs*10|1|0.26|ENSG00000112742|chr6:80042180-80042181|AA/-|frameshift_variant;TTK|p.R854Gfs*39|1|0.4|ENSG00000112742|chr6:80042180-80042180|A/-|frameshift_variant	122.93914200107957	0.019420478173996256	6				NaN	NaN	0	NaN	1187	2375	3557
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3582	14.417	NaN	31059	30	0	18621	0.214				-1	 	0	72	508.30319843255126	1014.5918439319025	2	508.30389404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1202	2378	3581
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3583	14.42	NaN	5731.3	30	0	1635.2	0.106	+			21943	KSADPLKSK	9	60	487.2866826996981	972.5588124661962	2	487.2869873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KSADPLKSK_	CAPN7|p.K253Nfs*21|1|0.35|ENSG00000131375|chr3:15227870-15227870|A/-|frameshift_variant;ENSG00000131375|ENST00000253693|CAPN7;ENST00000457023.1_1_3:15247773-15262489:+|nuORF	101.45984612302182	0.0377122763612125	6				NaN	NaN	0	NaN	1203	2378	3581
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3584	14.422	NaN	6644.5	30	0	1733.9	0.106			+	-1	MSIFGWLGICM	11	67	637.2922417699139	1272.5699306066276	2	637.2918701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))SIFGWLGICM_	REV__ENST00000435761.5_1_3:184018427-184018472:+|nuORF	60.97194046774394	0.3147792151722205	6				NaN	NaN	0	NaN	1204	2378	3581
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3585	14.424	NaN	3614.6	30	0	1122.8	0.106	+			20150	KEKPTGPPA	9	61	462.7604135420359	923.5062741508718	2	462.76068115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEKPTGPPA_	ENSG00000204472|ENST00000376059|AIF1;nc|ENSG00000204472|P55008-2|AIF1	85.16082228582465	0.07850854922700509	6				NaN	NaN	0	NaN	1205	2378	3581
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3586	14.426	NaN	4193.9	30	0	861.6	0.106	+			30516	QAGLSNLAPR	10	72	513.7889208449236	1025.5632887566471	2	514.29248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QAGLSNLAPR_	ENSG00000135451|ENST00000257909|TROAP	41.080066990542036	0.5391928043837881	6				NaN	NaN	0	NaN	1206	2378	3581
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3587	14.428	NaN	1445	30	0	159.9	0.033			+	23302	KYPAAHGT	8	51	422.71905517578125	NaN	0	422.71905517578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KYPAAHGT_	REV__ENSG00000130653|ENST00000406427|PNPLA7;REV__nc|ENSG00000130653|Q6ZV29-2|PNPLA7;REV__nc|ENSG00000130653|Q6ZV29-3|PNPLA7;REV__nc|ENSG00000130653|Q6ZV29-4|PNPLA7;REV__nc|ENSG00000130653|Q6ZV29|PNPLA7;REV__PNPLA7|p.G1083Afs*19|1|0.2|ENSG00000130653|chr9:137463435-137463435|C/-|frameshift_variant	26.79610172149135	1.7418937515398478	6				NaN	NaN	0	NaN	1207	2378	3581
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3588	14.428	NaN	1315	30	0	184.13	0.139			+	-1	DDRPCIAH	8	48	492.2210005037874	982.4274480743749	2	492.22125244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_DDRPC(Carbamidomethyl (C))IAH_	REV__CARD14|p.P600Rfs*17|1|0.3|ENSG00000141527|chr17:80198536-80198536|C/-|frameshift_variant;REV__CARD14|p.S480Afs*49|2|0.35|ENSG00000141527|chr17:80195266-80195266|C/-|frameshift_variant;REV__ENSG00000141527|ENST00000648509|CARD14;REV__ENST00000571861.5_1_17:78162196-78169468:+|nuORF;REV__ENST00000575500.5_2_17:78163648-78178987:+|nuORF;REV__nc|ENSG00000141527|Q9BXL6-2|CARD14;REV__nc|ENSG00000141527|Q9BXL6-3|CARD14	26.79610172149135	0.7524337208463756	6				NaN	NaN	0	NaN	1208	2378	3581
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3606	14.468	NaN	22674	30	0	2010.4	0.214	+			32787	RASHPIVQK	9	84	518.3057558265697	1034.5969587199393	2	518.306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RASHPIVQK_	ENSG00000112159|ENST00000369393|MDN1;MDN1|p.E2692*|2|0.32|ENSG00000112159|chr6:89706133-89706134|-/A|frameshift_variant;MDN1|p.F2691Lfs*7|2|0.37|ENSG00000112159|chr6:89706134-89706134|A/-|frameshift_variant;MDN1|p.K2642Nfs*17|2|0.29|ENSG00000112159|chr6:89707449-89707449|T/-|frameshift_variant;MDN1|p.L4077Cfs*15|1|0.16|ENSG00000112159|chr6:89680625-89680625|G/-|frameshift_variant;MDN1|p.L5278Ffs*6|1|0.18|ENSG00000112159|chr6:89652273-89652274|-/A|frameshift_variant	114.8945686534367	0.024290463251177924	6				NaN	NaN	0	NaN	1223	2381	3605
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3607	14.471	NaN	6157.4	30	0	814.15	0.106	+			37725	SLTDSKQGK	9	67	482.25937999808446	NaN	0	482.2593688964844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLTDSKQGK_	ENSG00000254469|ENST00000679412|XNDC1N;ENST00000528511.6_2_11:71595487-71639632:-|nuORF;nc|ENSG00000289716|Q6ZNB5-2|XNDC1N	47.657333605630114	0.2228375344433429	6				NaN	NaN	0	NaN	1224	2381	3605
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3608	14.473	NaN	36798	30	0	14278	0.106			+	43467	TGNSTAVLTL	10	64	326.18166011666904	975.5231509502071	3	326.1822204589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TGNSTAVLTL_	REV__ENSG00000166478|ENST00000396602|ZNF143;REV__ENST00000532305.1_1_11:9546777-9549157:+|nuORF;REV__nc|ENSG00000166478|P52747-2|ZNF143;REV__nc|ENSG00000166478|P52747-3|ZNF143	30.503639358989545	0.6307262373768582	6				NaN	NaN	0	NaN	1225	2381	3605
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3609	14.475	NaN	5250.6	30	0	2044.8	0.106	+			23169	KVYTKSSHLK	10	49	397.5676290915524	1189.6810578748573	3	397.5677795410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KVYTKSSHLK_	ENSG00000067082|ENST00000497571|KLF6;ENSG00000102349|ENST00000468660|KLF8;ENSG00000102554|ENST00000377687|KLF5;ENSG00000109787|ENST00000261438|KLF3;ENSG00000118263|ENST00000309446|KLF7;ENSG00000118922|ENST00000703967|KLF12;ENST00000358094.7_1_X:56295423-56310924:+|nuORF;ENST00000462627.5_1_X:56295800-56310924:+|nuORF;nc|ENSG00000067082|Q99612-2|KLF6;nc|ENSG00000067082|Q99612-3|KLF6;nc|ENSG00000102554|Q13887-2|KLF5;nc|ENSG00000102554|Q13887-4|KLF5;nc|ENSG00000118263|O75840-2|KLF7;nc|ENSG00000118263|O75840-4|KLF7	28.081489160057373	0.6505064946289502	6				NaN	NaN	0	NaN	1226	2381	3605
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3610	14.477	NaN	5319	30	0	1187.1	0.106	+			5001	ATSAPEETK	9	57	467.22931730831823	932.4440816834365	2	467.2295837402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATSAPEETK_	ENSG00000021776|ENST00000156471|AQR;ENST00000543879.6_1_15:35148995-35166226:-|nuORF	65.46538089061403	0.16805504838372562	6				NaN	NaN	0	NaN	1227	2381	3605
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3611	14.479	NaN	36758	30	0	7809.6	0.034				-1	 	0	91	478.30522318538056	954.5958934375611	2	478.3057556152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1228	2381	3605
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3612	14.479	NaN	3301.2	30	0	649.4	0.14	+			2004	AKKDFFRL	8	64	512.8017716754036	NaN	0	513.2817993164062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AKKDFFRL_	ENSG00000198742|ENST00000361368|SMURF1;nc|ENSG00000198742|Q9HCE7|SMURF1	25.450171626174864	1.7418937515398478	6				NaN	NaN	0	NaN	1229	2381	3605
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3630	14.519	NaN	5019.8	30	0	870.53	0.214			+	1421	AEWVAPIVIT	10	66	549.8130199032009	1097.6114868732018	2	549.8141479492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEWVAPIVIT_	REV__AluSx_dup105968|chr19:17814932-17815230:+|4.066636172732648|0.3124682729523712|3.7|482.0|1|1|sense	63.53385203322761	0.33370026130094593	6				NaN	NaN	0	NaN	1244	2384	3629
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3631	14.522	NaN	10180	30	0	1260	0.106				-1	 	0	71	566.8063997679909	1131.5982466027817	2	566.807373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1245	2384	3629
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3632	14.524	NaN	3385.2	30	0	952.3	0.106	+			48788	VTYRDSKEK	9	42	375.86782167761913	1124.5816356330574	3	375.8679504394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTYRDSKEK_	ADGRF1|p.S523Pfs*3|1|0.35|ENSG00000153292|chr6:47009868-47009868|A/-|frameshift_variant;ADGRF1|p.S617Afs*12|1|0.14|ENSG00000153292|chr6:47009586-47009586|T/-|frameshift_variant;ENSG00000153292|ENST00000371253|ADGRF1;ENST00000471487.5_1_6:46982380-46993719:-|nuORF;ENST00000491283.5_1_6:46988465-46993719:-|nuORF;nc|ENSG00000153292|Q5T601-2|ADGRF1	25.57405402267927	0.5642445186134241	6				NaN	NaN	0	NaN	1246	2384	3629
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3633	14.526	NaN	3206.2	30	0	958.98	0.106			+	20961	KKEETGKK	8	61	474.27894468171354	946.5433364302271	2	474.2793884277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KKEETGKK_	REV__ATRX|p.I1049*|1|0.07|ENSG00000085224|chrX:77682111-77682111|T/-|frameshift_variant;REV__ATRX|p.I1049Nfs*4|1|0.15|ENSG00000085224|chrX:77682110-77682111|-/T|frameshift_variant;REV__ATRX|p.N1318Ifs*28|1|0.39|ENSG00000085224|chrX:77663549-77663549|T/-|frameshift_variant;REV__ATRX|p.Q1385Sfs*6|1|0.26|ENSG00000085224|chrX:77656621-77656622|-/A|frameshift_variant;REV__ENSG00000085224|ENST00000373344|ATRX;REV__nc|ENSG00000085224|P46100-2|ATRX;REV__nc|ENSG00000085224|P46100-3|ATRX;REV__nc|ENSG00000085224|P46100-4|ATRX;REV__nc|ENSG00000085224|P46100-5|ATRX;REV__nc|ENSG00000085224|P46100-6|ATRX	60.11826168202944	0.5006107059937851	6				NaN	NaN	0	NaN	1247	2384	3629
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3634	14.528	NaN	1424.7	30	0	186.62	0.106			+	32604	QYLKLPAVR	9	56	544.333251953125	NaN	0	544.333251953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QYLKLPAVR_	REV__ENST00000510786.1_1_4:164449856-164449955:-|nuORF	26.69291269510374	0.34280015626154364	6				NaN	NaN	0	NaN	1248	2384	3629
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3635	14.53	NaN	5726.1	30	0	614.64	0.036	+			38641	SSHVPIQKK	9	59	341.8692471638956	1022.5859120918867	3	341.86956787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSHVPIQKK_	ENSG00000158290|ENST00000371322|CUL4B;nc|ENSG00000158290|Q13620|CUL4B	63.53385203322761	0.18415635464017938	6				NaN	NaN	0	NaN	1249	2384	3629
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3636	14.53	NaN	4781.7	30	0	909.74	0.14			+	19598	KDERKKVV	8	61	501.30879246230825	NaN	0	501.3082275390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KDERKKVV_	REV__tr|U7T2M7|U7T2M7_FUSNUGalactokinaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=galKPE=3SV=1	69.6276240434122	1.7418937515398478	6				NaN	NaN	0	NaN	1250	2384	3629
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3654	14.568	NaN	20097	30	0	3620.5	0.214	+			23140	KVVVSPTKK	9	72	493.3232006860454	984.6318484388909	2	493.3237609863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVVVSPTKK_	ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232323706-232327997:-|nuORF	140.11223852658463	0.010427410095706195	6				NaN	NaN	0	NaN	1265	2387	3653
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3655	14.572	NaN	41868	30	0	6628.9	0.106	+			20045	KEKAKETAL	9	93	509.2999257906336	1016.5852986480672	2	509.3006591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEKAKETAL_	ENSG00000169230|ENST00000303204|PRELID1;ENST00000503853.1_1_5:176733373-176733568:+|nuORF;ENST00000567272.1_1_6:126965256-126965442:+|nuORF;nc|ENSG00000169230|Q9Y255-2|PRELID1	123.20810148215591	0.019257656778428764	6				NaN	NaN	0	NaN	1266	2387	3653
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3656	14.574	NaN	2705.8	30	0	595.7	0.106			+	33597	RLPCADEKGVL	11	39	600.8250508947965	1199.635548856393	2	600.8265991210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RLPCADEKGVL_	REV__ENST00000428206.5_1_7:72717270-72717387:-|nuORF	36.446750945000026	0.6065623449959539	6				NaN	NaN	0	NaN	1267	2387	3653
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3657	14.576	NaN	3379.7	30	0	357.46	0.106	+			32572	QWLERSFA	8	67	518.7634436656474	1035.5123343980947	2	518.7645874023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QWLERSFA_	ENSG00000008869|ENST00000233099|HEATR5B;nc|ENSG00000008869|Q9P2D3-2|HEATR5B;nc|ENSG00000008869|Q9P2D3-3|HEATR5B	51.33545320467046	0.5859736979383976	6				NaN	NaN	0	NaN	1268	2387	3653
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3658	14.577	NaN	52189	30	0	10028	0.106			+	38906	SSPPPCQLTPG	11	101	542.261176318425	1082.5077997036499	2	542.2632446289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSPPPCQLTPG_	REV__ENSG00000125505|ENST00000245615|MBOAT7;REV__nc|ENSG00000125505|Q96N66-2|MBOAT7;REV__nc|ENSG00000125505|Q96N66-3|MBOAT7	112.41091882917199	0.03502930040608075	6				NaN	NaN	0	NaN	1269	2387	3653
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3659	14.579	NaN	9182.9	30	0	2901.5	0.035	+			49336	VVSETNDTK	9	65	496.74781737048875	991.4810818077775	2	496.7480773925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VVSETNDTK_	ENSG00000111057|ENST00000388835|KRT18;ENST00000453838.2_1_1:182928211-182928406:-|nuORF	112.10723106719422	0.02684780151337622	6				NaN	NaN	0	NaN	1270	2387	3653
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3660	14.58	NaN	1490.3	30	0	155.64	0.14	+			20661	KGKSREGGTK	10	52	524.2979916536805	1046.5814303741608	2	524.775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KGKSREGGTK_	ENST00000380605.2_1_20:2774757-2774832:-|nuORF	36.31764250033197	0.5830761606467809	6				NaN	NaN	0	NaN	1271	2387	3653
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3678	14.619	NaN	23066	30	0	10123	0.214	+			3756	ATAEKCLHK	9	74	500.7650281387783	999.5155033443566	2	500.7655029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATAEKCLHK_	ENSG00000180098|ENST00000373830|TRNAU1AP;ENST00000464880.5_1_1:28879622-28887433:+|nuORF;ENST00000480930.5_1_1:28879622-28887666:+|nuORF;ENST00000484775.1_1_1:28887181-28904036:+|nuORF;ENST00000491577.5_1_1:28879622-28887259:+|nuORF;ENST00000495995.5_1_1:28880088-28887666:+|nuORF;TRNAU1AP|p.Q222Sfs*29|1|0.24|ENSG00000180098|chr1:28571305-28571305|C/-|frameshift_variant	145.15565482312357	0.00806134135205793	6				NaN	NaN	0	NaN	1286	2390	3677
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3679	14.623	NaN	19969	30	0	8122.2	0.106	+			12904	GESGAGKTV	9	75	403.20582762016784	804.3971023071357	2	403.2060241699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GESGAGKTV_	ENSG00000006788|ENST00000252172|MYH13;ENSG00000078814|ENST00000262873|MYH7B;ENSG00000092054|ENST00000355349|MYH7;ENSG00000109061|ENST00000226207|MYH1;ENSG00000109063|ENST00000583535|MYH3;ENSG00000125414|ENST00000245503|MYH2;ENSG00000128833|ENST00000261839|MYO5C;ENSG00000133020|ENST00000403437|MYH8;ENSG00000142347|ENST00000644032|MYO1F;ENSG00000144821|ENST00000693548|MYH15;ENSG00000157483|ENST00000288235|MYO1E;ENSG00000167306|ENST00000285039|MYO5B;ENSG00000197535|ENST00000399233|MYO5A;ENSG00000197616|ENST00000405093|MYH6;ENSG00000264424|ENST00000255381|MYH4;ENST00000541028.5_1_15:52553308-52587917:-|nuORF;ENST00000557461.1_1_14:23869380-23876432:-|nuORF;ENST00000558902.5_1_15:52548900-52571163:-|nuORF;ENST00000561810.1_1_15:52708302-52718136:-|nuORF;ENST00000594774.5_1_19:8618146-8642307:-|nuORF;ENST00000594977.5_1_19:8612968-8642307:-|nuORF;ENST00000595325.5_1_19:8616850-8642307:-|nuORF;ENST00000598529.5_1_19:8616563-8619410:-|nuORF;MYH1|p.L229Pfs*14|1|0.19|ENSG00000109061|chr17:10513876-10513877|-/G|frameshift_variant;MYH1|p.N889Mfs*24|1|0.19|ENSG00000109061|chr17:10504835-10504835|T/-|frameshift_variant;MYH13|p.K1396Nfs*37|1|0.46|ENSG00000006788|chr17:10312751-10312751|T/-|frameshift_variant;MYH15|p.E1364Vfs*7|1|0.04|ENSG00000144821|chr3:108414346-108414347|-/GGAGTTA|frameshift_variant;MYH15|p.F777Lfs*12|1|0.26|ENSG00000144821|chr3:108454134-108454134|A/-|frameshift_variant;MYH15|p.T1279Ifs*7|1|0.04|ENSG00000144821|chr3:108421141-108421142|-/ATAA|frameshift_variant;MYH2|p.R876Gfs*9|1|0.36|ENSG00000125414|chr17:10531704-10531704|T/-|frameshift_variant;MYH4|p.N981Tfs*16|1|0.12|ENSG00000264424|chr17:10453321-10453321|T/-|frameshift_variant;MYH4|p.Q222Hfs*6|1|0.02|ENSG00000264424|chr17:10463626-10463627|-/G|frameshift_variant;MYH7|p.I1207Tfs*26|1|0.04|ENSG00000092054|chr14:23419951-23419952|-/TGTAGTG|frameshift_variant;MYH8|p.E1123Gfs*19|1|0.39|ENSG00000133020|chr17:10400757-10400758|-/C|frameshift_variant;MYH8|p.I922Nfs*6|1|0.33|ENSG00000133020|chr17:10401709-10401710|-/T|frameshift_variant;MYH8|p.K1582Nfs*3|1|0.04|ENSG00000133020|chr17:10395349-10395350|-/G|frameshift_variant;MYH8|p.N600Ifs*5|1|0.32|ENSG00000133020|chr17:10409377-10409377|T/-|frameshift_variant;MYO1F|p.L967Cfs*94|1|0.31|ENSG00000142347|chr19:8522785-8522785|G/-|frameshift_variant;MYO1F|p.N396Kfs*13|1|0.44|ENSG00000142347|chr19:8548117-8548118|-/T|frameshift_variant;MYO5A|p.I1440Nfs*19|1|0.44|ENSG00000197535|chr15:52336477-52336478|-/T|frameshift_variant;MYO5B|p.Y287Lfs*17|1|0.31|ENSG00000167306|chr18:49984806-49984807|-/A|frameshift_variant;MYO5C|p.E1050Sfs*8|1|0.32|ENSG00000128833|chr15:52229192-52229192|C/-|frameshift_variant;MYO5C|p.I480Nfs*10|1|0.5|ENSG00000128833|chr15:52253414-52253415|-/T|frameshift_variant;MYO5C|p.L1151Wfs*19|1|0.17|ENSG00000128833|chr15:52223719-52223719|A/-|frameshift_variant;MYO5C|p.L933Hfs*33|1|0.04|ENSG00000128833|chr15:52237552-52237553|-/T|frameshift_variant;MYO5C|p.L933Sfs*35|1|0.04|ENSG00000128833|chr15:52237553-52237554|-/AAGTGGA|frameshift_variant;nc|ENSG00000078814|A7E2Y1|MYH7B;nc|ENSG00000125414|Q9UKX2-2|MYH2;nc|ENSG00000128833|Q9NQX4-2|MYO5C;nc|ENSG00000197535|Q9Y4I1-2|MYO5A;nc|ENSG00000197535|Q9Y4I1|MYO5A	131.03138772384656	0.014687601201650916	6				NaN	NaN	0	NaN	1287	2390	3677
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3680	14.625	NaN	20059	30	0	5179	0.106	+			36697	SGRLMPDPK	9	57	334.1795774239226	NaN	0	334.1795959472656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SGRLMPDPK_	ENSG00000198951|ENST00000396398|NAGA;NAGA|p.P198Qfs*3|1|0.46|ENSG00000198951|chr22:42066714-42066714|G/-|frameshift_variant	42.396135135203025	0.2590952873412954	6				NaN	NaN	0	NaN	1288	2390	3677
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3681	14.627	NaN	84637	30	0	9035.4	0.106			+	34981	SAAPRGLKRR	10	114	371.23233762555765	1110.675183476873	3	371.2325134277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SAAPRGLKRR_	REV__ENST00000268035.10_1_15:99192229-99192595:+|nuORF	69.6276240434122	0.2803623802747859	6				NaN	NaN	0	NaN	1289	2390	3677
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3682	14.628	NaN	4530.4	30	0	771.31	0.106			+	6223	AVRFLCPVL	9	35	339.8688673516431	1016.5847726551292	3	339.869384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVRFLCPVL_	REV__PCDHA2|p.R62C|1|0.28|ENSG00000204969|chr5:140795148-140795148|C/T|missense_variant	20.481830146152948	0.6112419832031293	6				NaN	NaN	0	NaN	1290	2390	3677
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3683	14.63	NaN	25500	30	0	3966	0.036	+			44707	TTKKPPLAQK	10	87	556.3446242966478	1110.6746956600955	2	556.3455810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TTKKPPLAQK_	ENSG00000130787|ENST00000253083|HIP1R;ENST00000538236.1_1_12:123345767-123346160:+|nuORF	104.01359247289065	0.06577755598965461	6				NaN	NaN	0	NaN	1291	2390	3677
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3684	14.631	NaN	6101.6	30	0	1213.9	0.14	+			51367	YTGRGPSS	8	50	412.6979701715151	823.3813874098303	2	412.6983642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YTGRGPSS_	ENSG00000140105|ENST00000392882|WARS1;ENST00000553808.5_1_14:100820782-100835522:-|nuORF;ENST00000554084.5_1_14:100819360-100828234:-|nuORF;ENST00000555063.5_1_14:100820782-100842614:-|nuORF;nc|ENSG00000140105|P23381-2|WARS1	55.50420428727701	0.5462892107279674	6				NaN	NaN	0	NaN	1292	2390	3677
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3702	14.67	NaN	5932.2	30	0	902.68	0.214	+			40606	SVAHSPPEK	9	62	476.2478868143304	950.4812206954608	2	476.2481994628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVAHSPPEK_	ENSG00000167173|ENST00000394987|C15orf39;nc|nan|Q6ZRI6-2|C15orf39	106.68306549817024	0.032382560583716295	6				NaN	NaN	0	NaN	1307	2393	3701
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3703	14.674	NaN	4246	30	0	1089.2	0.106				-1	 	0	70	456.7424005168866	911.4702481005733	2	456.7427978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1308	2393	3701
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3704	14.676	NaN	14930	30	0	2047.8	0.106	+			46331	VEKKKEPSV	9	72	522.308131427159	1042.6017099211178	2	522.30859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VEKKKEPSV_	ENSG00000167674|ENST00000616600|HDGFL2;nc|ENSG00000167674|Q7Z4V5-2|HDGFL2;nc|ENSG00000167674|Q7Z4V5-3|HDGFL2;nc|ENSG00000167674|Q7Z4V5-4|HDGFL2	96.0336014099291	0.047854655524928534	6				NaN	NaN	0	NaN	1309	2393	3701
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3705	14.678	NaN	17692	30	0	7486.7	0.106	+			6270	AVSLVPPDLTE	11	68	380.87547344339225	1139.6045909303768	3	380.87542724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVSLVPPDLTE_	ENSG00000116183|ENST00000367662|PAPPA2;nc|ENSG00000116183|Q9BXP8-2|PAPPA2	36.31764250033197	0.6083289427130232	6				NaN	NaN	0	NaN	1310	2393	3701
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3706	14.68	NaN	15996	30	0	2784.6	0.106	+			18254	IPCYWESQ	8	77	513.2222501041446	1024.429947275089	2	513.22314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IPCYWESQ_	ZC3H11A|p.N70S|1|0.71|ENSG00000058673|chr1:203828333-203828333|A/G|missense_variant	38.80614096846853	0.6637206697844082	6				NaN	NaN	0	NaN	1311	2393	3701
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3707	14.681	NaN	1149.3	30	0	91.603	0.034	+			32160	QSQAGALRM	9	49	481.2476501464844	NaN	0	481.2476501464844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QSQAGALRM_	LTBP2|p.H1816Tfs*32|6|0.37|ENSG00000119681|chr14:74500904-74500904|G/-|frameshift_variant	34.172542307311794	0.30503706118289736	6				NaN	NaN	0	NaN	1312	2393	3701
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3708	14.682	NaN	2277.5	30	0	467.67	0.143	+			37447	SLIFRPQKV	9	49	363.22679923350563	NaN	0	362.892578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SLIFRPQKV_	ENST00000437395.5_1_21:34958360-34960769:-|nuORF;ENST00000444517.5_1_21:34958357-34959841:-|nuORF	31.529811441608018	0.3183796599642538	6				NaN	NaN	0	NaN	1313	2393	3701
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3726	14.722	NaN	20352	30	0	2904.4	0.214				-1	 	0	73	380.20871903949086	758.4028851457817	2	380.2089538574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1328	2396	3725
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3727	14.725	NaN	6615.5	30	0	1268	0.106				-1	 	0	63	512.2456332072593	1022.4767134813186	2	512.2463989257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1329	2396	3725
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3728	14.727	NaN	7618.2	30	0	737.23	0.106	+			24670	LGVREPQQ	8	66	463.75604916658943	NaN	0	463.756103515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LGVREPQQ_	ENST00000305321.4_1_16:30205331-30205436:-|nuORF	73.97473282117947	1.7418937515398478	6				NaN	NaN	0	NaN	1330	2396	3725
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3729	14.729	NaN	69110	30	0	13612	0.106	+			33040	REKDTVKKL	9	119	372.8956952312924	1115.6652562940772	3	372.8959655761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_REKDTVKKL_	ENSG00000125844|ENST00000377813|RRBP1;nc|ENSG00000125844|Q9P2E9-3|RRBP1	106.68306549817024	0.032382560583716295	6				NaN	NaN	0	NaN	1331	2396	3725
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3730	14.731	NaN	2168	30	0	646.16	0.106			+	43594	TIIMVPTSK	9	61	495.2871963954298	NaN	0	495.2872314453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TIIMVPTSK_	REV__ENSG00000133216|ENST00000374630|EPHB2;REV__nc|ENSG00000133216|P29323-3|EPHB2;REV__nc|ENSG00000133216|P29323|EPHB2	41.42661286455405	0.26577678759562784	6				NaN	NaN	0	NaN	1332	2396	3725
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3731	14.733	NaN	6036.9	30	0	1747	0.036	+			16410	HERAKSTVM	9	65	529.7735275789411	1057.532502224682	2	529.7747802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HERAKSTVM_	ENSG00000095932|ENST00000215531|SMIM24	72.87924865735499	0.12833875048249987	6				NaN	NaN	0	NaN	1333	2396	3725
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3732	14.733	NaN	3961.7	30	0	922.91	0.146			+	-1	ADDMLGLQFRQ	11	64	437.2125947680894	1308.6159549044683	3	437.2128601074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_ADDM(Oxidation (M))LGLQFRQ_	REV__ENSG00000145390|ENST00000692078|USP53	29.550750289552195	0.6798279264880025	6				NaN	NaN	0	NaN	1334	2396	3725
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3750	14.771	NaN	32687	30	0	7529.6	0.214				-1	 	0	87	452.77610645373505	903.5376599742701	2	452.77642822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1349	2399	3749
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3751	14.774	NaN	12837	30	0	2253.3	0.106				-1	 	0	75	457.73183075591623	913.4491085786325	2	457.7322998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1350	2399	3749
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3752	14.776	NaN	7596.3	30	0	2838.7	0.106	+			22600	KTTGTMIHK	9	65	508.78150698015605	NaN	0	508.78143310546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KTTGTMIHK_	ENSG00000102699|ENST00000381989|PARP4	101.25262130126117	0.018912469721856617	6				NaN	NaN	0	NaN	1351	2399	3749
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3753	14.778	NaN	7465.9	30	0	3695.1	0.106	+			3106	ASGNRESVV	9	71	459.73569825491126	917.4568435766225	2	459.7360534667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASGNRESVV_	ENSG00000131263|ENST00000332687|RLIM;nc|ENSG00000131263|Q9NVW2-2|RLIM	51.33545320467046	0.2872990594074956	6				NaN	NaN	0	NaN	1352	2399	3749
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3754	14.78	NaN	19374	30	0	5415.7	0.106			+	-1	VEQCMLLLV	9	58	368.8644048434749	1103.5713851306248	3	368.86474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_VEQC(Carbamidomethyl (C))MLLLV_	REV__ENST00000448177.1_1_3:25832680-25833374:+|nuORF;REV__ENST00000452098.1_1_3:25832770-25832893:+|nuORF	34.172542307311794	0.4838870758800184	6				NaN	NaN	0	NaN	1353	2399	3749
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3755	14.782	NaN	9325.6	30	0	2442	0.035	+			48532	VTNPKRIAK	9	65	513.8240326786591	1025.6335124241182	2	513.8245849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTNPKRIAK_	ENSG00000074800|ENST00000234590|ENO1;ENST00000464920.1_1_1:8921421-8930582:-|nuORF;nc|ENSG00000074800|P06733-2|ENO1	98.58198989935565	0.04066992115528678	6				NaN	NaN	0	NaN	1354	2399	3749
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3756	14.783	NaN	5111.5	30	0	888.45	0.139				-1	 	0	62	478.73710586028994	955.4596587873799	2	478.7374572753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1355	2399	3749
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3774	14.821	NaN	25031	30	0	6271.7	0.214			+	-1	LPCCGGRRRK	10	63	401.5504305368759	1201.6294622108278	3	401.5505676269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_LPC(Carbamidomethyl (C))CGGRRRK_	REV__ZC3H10|p.P217Lfs*24|1|0.42|ENSG00000135482|chr12:56121207-56121207|C/-|frameshift_variant	49.536043120802724	0.461275219792494	6				NaN	NaN	0	NaN	1370	2402	3773
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3775	14.825	NaN	16517	30	0	3832	0.106	+			38677	SSIRHMIRK	9	61	381.88498486123353	1142.6331251839006	3	381.8853759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_SSIRHM(Oxidation (M))IRK_	ENSG00000108107|ENST00000344063|RPL28;nc|ENSG00000108107|P46779-2|RPL28;nc|ENSG00000108107|P46779-3|RPL28	58.22992032128504	0.22837015374068087	6				NaN	NaN	0	NaN	1371	2402	3773
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3776	14.827	NaN	5397.2	30	0	520.45	0.106	+			96	AADEKARKL	9	73	501.2899555497865	1000.565358166373	2	501.2906799316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AADEKARKL_	ENSG00000114670|ENST00000383366|NEK11;nc|ENSG00000114670|Q8NG66-2|NEK11;nc|ENSG00000114670|Q8NG66-3|NEK11;nc|ENSG00000114670|Q8NG66-4|NEK11	85.86182877749512	0.07653218437724067	6				NaN	NaN	0	NaN	1372	2402	3773
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3777	14.829	NaN	2886.4	30	0	396.33	0.106			+	24682	LGYKQRNQ	8	61	503.7736989025745	NaN	0	503.77362060546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LGYKQRNQ_	REV__ENSG00000249715|ENST00000624922|FER1L5;REV__FER1L5|p.K1269Efs*5|1|0.36|ENSG00000249715|chr2:96694446-96694447|AA/-|frameshift_variant;REV__FER1L5|p.Q1290Pfs*29|1|0.44|ENSG00000249715|chr2:96695548-96695549|-/C|frameshift_variant	76.84663266511073	1.7418937515398478	6				NaN	NaN	0	NaN	1373	2402	3773
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3778	14.83	NaN	2465.2	30	0	423.24	0.106			+	10135	ESQRFPAE	8	59	482.23087894427744	NaN	0	481.7484436035156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ESQRFPAE_	REV__MTTP|p.F840S|1|0.24|ENSG00000138823|chr4:99622682-99622682|T/C|missense_variant	60.97194046774394	1.7418937515398478	6				NaN	NaN	0	NaN	1374	2402	3773
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3779	14.832	NaN	3158.6	30	0	740.03	0.036	+			32227	QTDRPGILPG	10	59	527.2878311139068	1052.5611092946135	2	527.2885131835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QTDRPGILPG_	ENST00000416681.5_1_7:48128326-48128464:+|nuORF	54.776311868738084	0.41334902933431344	6				NaN	NaN	0	NaN	1375	2402	3773
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3780	14.833	NaN	16637	30	0	1623.3	0.14	+			38514	SSCGKFQTK	9	83	521.7521433404095	1041.4897337476189	2	521.7532348632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_SSC(Carbamidomethyl (C))GKFQTK_	DDX24|p.A177Rfs*34|1|0.2|ENSG00000089737|chr14:94079221-94079221|G/-|frameshift_variant;DDX24|p.S507Ffs*17|1|0.26|ENSG00000089737|chr14:94060491-94060492|-/A|frameshift_variant;ENSG00000089737|ENST00000621632|DDX24;ENST00000555324.1_1_14:94545323-94547480:-|nuORF;ENST00000555762.1_1_14:94524146-94547480:-|nuORF;nc|ENSG00000089737|Q9GZR7-2|DDX24	88.17693792209575	0.07000514020414955	6				NaN	NaN	0	NaN	1376	2402	3773
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3797	14.87	NaN	425000	30	0	106570	0.214				-1	 	0	136	367.55690746516717	1099.6488929957015	3	367.5572814941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1390	2405	3796
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3798	14.874	NaN	21738	30	0	4205.4	0.106	+			38981	SSSALHVHK	9	72	483.2609563788193	964.5073598244386	2	483.261474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSSALHVHK_	ENSG00000173480|ENST00000312026|ZNF417;ENSG00000198466|ENST00000339656|ZNF587;nc|ENSG00000173480|Q8TAU3-2|ZNF417;nc|ENSG00000198466|Q96SQ5-2|ZNF587;ZNF417|p.R546Kfs*4|1|0.34|ENSG00000173480|chr19:57908641-57908642|-/T|frameshift_variant	123.20810148215591	0.019257656778428764	6				NaN	NaN	0	NaN	1391	2405	3796
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3799	14.876	NaN	185590	30	0	33959	0.106				-1	 	0	99	550.8316694746708	1099.6487860161415	2	550.8325805664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1392	2405	3796
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3800	14.877	NaN	12685	30	0	3269	0.106				-1	 	0	64	469.72103835382745	937.4275237744549	2	469.72125244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1393	2405	3796
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3801	14.879	NaN	3522	30	0	268.12	0.106				-1	 	0	60	457.73183075591623	913.4491085786325	2	458.2844543457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1394	2405	3796
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3802	14.881	NaN	2674.5	30	0	237.35	0.034	+			1906	AIQKGVAEK	9	56	472.2818908691406	NaN	0	472.2818908691406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AIQKGVAEK_	ENSG00000140575|ENST00000268182|IQGAP1;IQGAP1|p.N941Ifs*8|1|0.43|ENSG00000140575|chr15:90476693-90476693|A/-|frameshift_variant;IQGAP1|p.S1529Afs*10|1|0.15|ENSG00000140575|chr15:90492665-90492665|A/-|frameshift_variant	69.6276240434122	0.10825701912424071	6				NaN	NaN	0	NaN	1395	2405	3796
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3803	14.882	NaN	3304.8	30	0	1092	0.143			+	38703	SSKRKWSS	8	27	322.5102233886719	NaN	0	322.5102233886719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSKRKWSS_	REV__ARHGEF10L|p.F122Sfs*8|1|0.23|ENSG00000074964|chr1:17603521-17603521|T/-|frameshift_variant;REV__ARHGEF10L|p.P650Hfs*34|1|0.39|ENSG00000074964|chr1:17637904-17637904|C/-|frameshift_variant;REV__ENSG00000074964|ENST00000361221|ARHGEF10L;REV__nc|ENSG00000074964|Q9HCE6-2|ARHGEF10L;REV__nc|ENSG00000074964|Q9HCE6-3|ARHGEF10L;REV__nc|ENSG00000074964|Q9HCE6-5|ARHGEF10L	23.04248740728303	1.7418937515398478	6				NaN	NaN	0	NaN	1396	2405	3796
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3822	14.921	NaN	9208.8	30	0	1897.2	0.214			+	21284	KLQKQKLE	8	81	507.81843546368236	1013.6223179941647	2	507.8188781738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KLQKQKLE_	REV__CENPJ|p.L906*|1|0.48|ENSG00000151849|chr13:24904034-24904034|A/-|frameshift_variant;REV__ENSG00000151849|ENST00000381884|CENPJ;REV__nc|ENSG00000151849|Q9HC77-2|CENPJ	82.24051045832904	0.30490469762271794	6				NaN	NaN	0	NaN	1412	2408	3821
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3823	14.925	NaN	4194.5	30	0	567.11	0.106	+			1265	AESEKSQKL	9	66	510.27178955078125	NaN	0	510.27178955078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AESEKSQKL_	ENSG00000137497|ENST00000393695|NUMA1;nc|ENSG00000137497|Q14980-2|NUMA1;nc|ENSG00000137497|Q14980-3|NUMA1;nc|ENSG00000137497|Q14980-4|NUMA1;NUMA1|p.K1766Rfs*2|1|0.39|ENSG00000137497|chr11:72007357-72007357|G/-|frameshift_variant;NUMA1|p.L1786Pfs*18|1|0.23|ENSG00000137497|chr11:72007295-72007296|-/G|frameshift_variant	88.17693792209575	0.04527150213038833	6				NaN	NaN	0	NaN	1413	2408	3821
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3824	14.927	NaN	38909	30	0	9491.6	0.106	+			2223	ALRWQVSTPG	10	71	372.2062389675255	1113.5968875027766	3	372.2060852050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ALRWQVSTPG_	ENST00000372980.3_1_20:42815125-42815341:-|nuORF	26.063383197487333	0.6669871633831898	6				NaN	NaN	0	NaN	1414	2408	3821
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3825	14.928	NaN	15855	30	0	2327.5	0.106	+			33087	REKRTTVVA	9	84	530.316659366481	1058.6187657997618	2	530.3173217773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_REKRTTVVA_	ENSG00000104408|ENST00000220849|EIF3E;ENST00000518442.5_1_8:109247181-109261015:-|nuORF	68.84614121027924	0.14577793175421136	6				NaN	NaN	0	NaN	1415	2408	3821
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3826	14.93	NaN	3467.7	30	0	541.83	0.106			+	30643	QATAILNRL	9	61	500.3002131145532	998.5858732959064	2	500.30084228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QATAILNRL_	REV__ENSG00000119760|ENST00000337768|SUPT7L;REV__nc|ENSG00000119760|O94864-2|SUPT7L	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	1416	2408	3821
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3827	14.932	NaN	1787.7	30	0	138.82	0.036	+			20933	KKAMGQVAFH	10	66	558.8009033203125	NaN	0	558.8009033203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KKAMGQVAFH_	ENST00000500779.2_1_5:111005234-111063675:+|nuORF	51.33545320467046	0.297159550775418	6				NaN	NaN	0	NaN	1417	2408	3821
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3828	14.933	NaN	3187.6	30	0	382.6	0.14			+	22215	KSVARPAAVK	10	70	513.8240326786591	1025.6335124241182	2	513.8258666992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KSVARPAAVK_	REV__ENSG00000240303|ENST00000264990|ACAD11;REV__ENST00000496418.5_1_3:132277817-132297733:-|nuORF;REV__nc|ENSG00000240303|Q709F0-2|ACAD11;REV__nc|ENSG00000240303|Q709F0-3|ACAD11	41.080066990542036	0.5391928043837881	6				NaN	NaN	0	NaN	1418	2408	3821
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3846	14.971	NaN	8570.2	30	0	1209.4	0.214	+			15359	GTVSKVTGK	9	72	438.76087261076697	NaN	0	438.76092529296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTVSKVTGK_	ENSG00000196526|ENST00000420658|AFAP1;nc|ENSG00000196526|Q8N556|AFAP1	68.84614121027924	0.11159004992091766	6				NaN	NaN	0	NaN	1433	2411	3845
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3847	14.975	NaN	13197	30	0	4878.4	0.106			+	2310	AMHIFTLG	8	66	445.23515194877086	888.4557509643417	2	445.23468017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AMHIFTLG_	REV__ENSG00000119041|ENST00000263956|GTF3C3	57.452649787351945	0.526999880452039	6				NaN	NaN	0	NaN	1434	2411	3845
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3848	14.977	NaN	8712.1	30	0	2895.4	0.106	+			42339	TAGSPNLAAG	10	66	429.7192944681447	NaN	0	429.71923828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TAGSPNLAAG_	ENSG00000138193|ENST00000371380|PLCE1;nc|ENSG00000138193|Q9P212-2|PLCE1;PLCE1|p.A1544Pfs*9|1|0.07|ENSG00000138193|chr10:94273681-94273681|A/-|frameshift_variant;PLCE1|p.E2087Gfs*37|1|0.1|ENSG00000138193|chr10:94316672-94316676|AGAAG/-|frameshift_variant	67.49366992349736	0.17308373824428946	6				NaN	NaN	0	NaN	1435	2411	3845
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3849	14.979	NaN	1844.6	30	0	218.63	0.106			+	13239	GILGSAIDRM	10	64	516.7791565633162	NaN	0	516.7792358398438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GILGSAIDRM_	REV__ENSG00000198734|ENST00000367797|F5;REV__F5|p.G1754Efs*13|1|0.41|ENSG00000198734|chr1:169529768-169529768|T/-|frameshift_variant;REV__F5|p.S1606Pfs*5|1|0.07|ENSG00000198734|chr1:169536662-169536663|-/CTGAAGTGGA|frameshift_variant	51.33545320467046	0.297159550775418	6				NaN	NaN	0	NaN	1436	2411	3845
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3850	14.981	NaN	8300.1	30	0	1098.3	0.106	+			21008	KKGTNPNLL	9	65	492.79508006502	983.57560719684	2	492.7955017089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KKGTNPNLL_	RSRC2|p.R335Gfs*23|1|0.06|ENSG00000111011|chr12:122508250-122508250|T/-|frameshift_variant	104.74654710444128	0.034358562718640136	6				NaN	NaN	0	NaN	1437	2411	3845
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3851	14.982	NaN	6105.9	30	0	887.92	0.032	+			8158	EAAKKAAL	8	62	401.2450630040884	NaN	0	401.2449951171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EAAKKAAL_	tr|U7SPP7|U7SPP7_FUSNUMethylaspartatemutaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01855PE=4SV=1	44.116797842482775	1.7418937515398478	6				NaN	NaN	0	NaN	1438	2411	3845
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3852	14.983	NaN	13896	30	0	2153	0.141	+			18783	ITQGKDAAVSK	11	75	559.3145572562615	1116.614561579323	2	559.314697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ITQGKDAAVSK_	ENSG00000140464|ENST00000268058|PML;ENST00000564725.1_1_15:74290377-74317280:+|nuORF;nc|ENSG00000140464|P29590-10|PML;nc|ENSG00000140464|P29590-11|PML;nc|ENSG00000140464|P29590-12|PML;nc|ENSG00000140464|P29590-13|PML;nc|ENSG00000140464|P29590-14|PML;nc|ENSG00000140464|P29590-2|PML;nc|ENSG00000140464|P29590-3|PML;nc|ENSG00000140464|P29590-4|PML;nc|ENSG00000140464|P29590-5|PML;nc|ENSG00000140464|P29590-8|PML;nc|ENSG00000140464|P29590-9|PML	144.69833601371718	0.0001356525017137265	6				NaN	NaN	0	NaN	1439	2411	3845
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3870	15.022	NaN	32284	30	0	3108.1	0.208			+	16125	HDYRCRTGY	9	77	585.759408813421	1169.504264693642	2	585.76025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HDYRCRTGY_	REV__ENSG00000075975|ENST00000170447|MKRN2	55.50420428727701	0.2510918378945873	6				NaN	NaN	0	NaN	1454	2414	3869
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3871	15.026	NaN	19793	30	0	5657.7	0.106			+	-1	STWLCGVMSTL	11	74	418.8672861163055	1253.5800289491165	3	418.8677673339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_STWLC(Carbamidomethyl (C))GVMSTL_	REV__ENSG00000102384|ENST00000682095|CENPI	36.31764250033197	0.6083289427130232	6				NaN	NaN	0	NaN	1455	2414	3869
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3872	15.028	NaN	29878	30	0	10646	0.106	+			22377	KTIDASVSKK	10	94	359.5480700940715	1075.6223808824145	3	359.5484313964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KTIDASVSKK_	ENSG00000171681|ENST00000261168|ATF7IP;ENST00000535179.1_1_12:14619386-14628955:+|nuORF;ENST00000537653.5_1_12:14576849-14628955:+|nuORF;nc|ENSG00000171681|Q6VMQ6-2|ATF7IP;nc|ENSG00000171681|Q6VMQ6-4|ATF7IP;nc|ENSG00000171681|Q6VMQ6-5|ATF7IP	141.88618038797316	0.010251192423762169	6				NaN	NaN	0	NaN	1456	2414	3869
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3873	15.03	NaN	41866	30	0	5238.2	0.106	+			19285	KAFQATQQK	9	92	525.2899622716441	1048.565371610088	2	525.2921752929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KAFQATQQK_	ENSG00000145391|ENST00000274031|SETD7	199.70438780651162	3.456851077920069E-05	6				NaN	NaN	0	NaN	1457	2414	3869
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3874	15.032	NaN	26390	30	0	2813.6	0.106	+			4038	ATDDSKAVCR	10	93	533.2525674523137	1064.4905819714272	2	533.2536010742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATDDSKAVCR_	ENSG00000115758|ENST00000234111|ODC1	114.85826248499774	0.03459167991829056	6				NaN	NaN	0	NaN	1458	2414	3869
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3875	15.033	NaN	17886	30	0	3927.3	0.036				-1	PALSSCGCSAP	11	81	553.7329784756963	1105.4514040181925	2	553.7340698242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Carbamidomethyl (C)	_PALSSC(Carbamidomethyl (C))GC(Carbamidomethyl (C))SAP_	NOS3|p.G843Afs*115|1|0.27|ENSG00000164867|chr7:151010123-151010123|C/-|frameshift_variant	49.44154591367651	0.42875387410569	6				NaN	NaN	0	NaN	1459	2414	3869
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3876	15.034	NaN	15914	30	0	6608.8	0.14				-1	 	0	65	429.73696655355263	857.4593801739053	2	429.7374267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1460	2414	3869
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3894	15.072	NaN	6361.3	30	0	657.9	0.214	+			43010	TEKQKESTL	9	72	532.2853774541911	NaN	0	532.285400390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEKQKESTL_	ENSG00000153046|ENST00000397588|CDYL;nc|ENSG00000153046|Q9Y232|CDYL	123.20810148215591	0.0016355521601317592	6				NaN	NaN	0	NaN	1475	2417	3893
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3895	15.076	NaN	6140.6	30	0	1260.3	0.106	+			48513	VTNDKLTSK	9	67	503.2822509620124	NaN	0	503.28228759765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTNDKLTSK_	ENSG00000135899|ENST00000258381|SP110;ENST00000486146.2_1_2:231068050-231077551:-|nuORF;nc|ENSG00000135899|Q9HB58-3|SP110;nc|ENSG00000135899|Q9HB58-5|SP110;nc|ENSG00000135899|Q9HB58-7|SP110;nc|ENSG00000135899|Q9HB58|SP110	96.66504779109242	0.02816047575905831	6				NaN	NaN	0	NaN	1476	2417	3893
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3896	15.078	NaN	5419	30	0	2676.8	0.106	+			11630	FQARALTPQ	9	55	344.5253265633305	1030.5541502901915	3	344.5258483886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FQARALTPQ_	ENSG00000032389|ENST00000382125|EIPR1	30.503639358989545	0.5181749237905803	6				NaN	NaN	0	NaN	1477	2417	3893
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3897	15.08	NaN	9350.6	30	0	2648.4	0.106	+			33894	RRRGAVVAK	9	62	338.2213557438394	1011.6422378317183	3	338.22186279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RRRGAVVAK_	ENSG00000132702|ENST00000255039|HAPLN2	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	1478	2417	3893
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3898	15.082	NaN	10527	30	0	5666.9	0.106	+			22176	KSSLENIISK	10	66	559.8242569080421	1117.6339608828841	2	559.825439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KSSLENIISK_	EFCAB7|p.F431Lfs*3|2|0.41|ENSG00000203965|chr1:63557186-63557186|T/-|frameshift_variant;ENSG00000203965|ENST00000371088|EFCAB7;nc|ENSG00000203965|A8K855-2|EFCAB7	50.79123845855914	0.44970922346023856	6				NaN	NaN	0	NaN	1479	2417	3893
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3899	15.083	NaN	2412.1	30	0	661	0.034	+			27861	MTGSSAPCK	9	55	469.7064874261641	937.3984219191282	2	469.7068786621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_MTGSSAPC(Carbamidomethyl (C))K_	ENST00000392001.6_1_2:238499129-238499162:-|nuORF	51.19269402634007	0.2889735674168909	6				NaN	NaN	0	NaN	1480	2417	3893
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3900	15.084	NaN	1170.3	30	0	91.39	0.139	+			18421	ISALGDKSK	9	52	459.7664145524672	917.5182761717344	2	459.7662048339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ISALGDKSK_	ENSG00000139116|ENST00000361418|KIF21A;KIF21A|p.L1270Sfs*13|1|0.12|ENSG00000139116|chr12:39318174-39318175|-/G|frameshift_variant;KIF21A|p.N748Ifs*9|1|0.3|ENSG00000139116|chr12:39340232-39340232|T/-|frameshift_variant;KIF21A|p.P1541Lfs*6|1|0.27|ENSG00000139116|chr12:39303074-39303074|G/-|frameshift_variant;KIF21A|p.S524Lfs*15|1|0.26|ENSG00000139116|chr12:39351880-39351880|A/-|frameshift_variant;KIF21A|p.V717Lfs*12|4|0.32|ENSG00000139116|chr12:39340327-39340327|T/-|frameshift_variant;nc|ENSG00000139116|Q7Z4S6-2|KIF21A;nc|ENSG00000139116|Q7Z4S6-3|KIF21A;nc|ENSG00000139116|Q7Z4S6-4|KIF21A;nc|ENSG00000139116|Q7Z4S6-5|KIF21A;nc|ENSG00000139116|Q7Z4S6-6|KIF21A	25.57405402267927	0.5642445186134241	6				NaN	NaN	0	NaN	1481	2417	3893
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3918	15.123	NaN	34552	30	0	8318.1	0.214				-1	 	0	82	439.23438514338346	876.454217353567	2	439.2346496582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1496	2420	3917
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3919	15.127	NaN	13523	30	0	2926.2	0.106	+			33072	REKKEESEL	9	85	574.3005839078353	1146.5866148824705	2	574.3013305664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_REKKEESEL_	ENSG00000067082|ENST00000497571|KLF6;nc|ENSG00000067082|Q99612-2|KLF6;nc|ENSG00000067082|Q99612-3|KLF6	117.5257442709337	0.022697614825424036	6				NaN	NaN	0	NaN	1497	2420	3917
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3920	15.129	NaN	237510	30	0	39258	0.106				-1	 	0	129	492.7709672835718	983.5273816339436	2	492.7713623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1498	2420	3917
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3921	15.131	NaN	8385.8	30	0	2712.1	0.106			+	7995	DTEKRKEEL	9	51	383.2029890913746	1146.5871378743238	3	383.20318603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DTEKRKEEL_	REV__ENSG00000136100|ENST00000378060|VPS36;REV__nc|ENSG00000136100|Q86VN1-2|VPS36	32.81241826257853	0.4965981579233955	6				NaN	NaN	0	NaN	1499	2420	3917
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3922	15.133	NaN	4548.6	30	0	965.42	0.106	+			33243	RGAPPIRDK	9	55	337.2015546459383	NaN	0	337.2015075683594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RGAPPIRDK_	B3GNT5|p.F349Lfs*8|1|0.12|ENSG00000176597|chr3:183270839-183270839|T/-|frameshift_variant;ENSG00000176597|ENST00000326505|B3GNT5	52.936696900407355	0.1864545979552969	6				NaN	NaN	0	NaN	1500	2420	3917
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3923	15.134	NaN	5888.5	30	0	1656.9	0.034	+			45305	TVSATSPNK	9	55	452.7395858272033	903.4646187212066	2	452.7401123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TVSATSPNK_	ENSG00000105856|ENST00000222574|HBP1;nc|ENSG00000105856|O60381-2|HBP1;nc|ENSG00000105856|O60381-3|HBP1	117.81106730687013	0.02252488733980868	6				NaN	NaN	0	NaN	1501	2420	3917
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3924	15.135	NaN	3927.7	30	0	1545.7	0.14	+			21670	KQALRKEH	8	55	505.2983614568726	NaN	0	505.2983703613281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KQALRKEH_	ENSG00000161013|ENST00000292591|MGAT4B;ENST00000522293.5_1_5:179225178-179226553:-|nuORF;nc|ENSG00000161013|Q9UQ53-2|MGAT4B;nc|ENSG00000161013|Q9UQ53-3|MGAT4B	40.5726180659479	1.7418937515398478	6				NaN	NaN	0	NaN	1502	2420	3917
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3942	15.171	NaN	9682.4	30	0	982.53	0.214				-1	 	0	79	552.7853178986879	1103.5560828641758	2	552.7863159179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1517	2423	3941
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3943	15.175	NaN	17530	30	0	6245.4	0.106	+			21889	KRPSSLHK	8	71	476.7876385216958	951.5607241101916	2	476.7875671386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KRPSSLHK_	ENSG00000102763|ENST00000379310|VWA8;nc|ENSG00000102763|A3KMH1-3|VWA8;VWA8|p.D1438Ifs*16|1|0.27|ENSG00000102763|chr13:41685063-41685063|T/-|frameshift_variant;VWA8|p.G1575Efs*53|1|0.25|ENSG00000102763|chr13:41611729-41611729|C/-|frameshift_variant	49.44154591367651	0.597725784090933	6				NaN	NaN	0	NaN	1518	2423	3941
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3944	15.177	NaN	7040.9	30	0	1312.7	0.106			+	40651	SVAQVGAKLK	10	68	500.810119067054	999.605685200908	2	500.81048583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVAQVGAKLK_	REV__ENST00000380995.5_1_22:47569631-47570030:+|nuORF	96.0336014099291	0.09653029772959643	6				NaN	NaN	0	NaN	1519	2423	3941
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3945	15.179	NaN	8250.2	30	0	1200.1	0.106				-1	EMIFDWVDVER	11	72	485.55831587614296	1453.653118228629	3	485.558837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_EM(Oxidation (M))IFDWVDVER_	ENSG00000255587|ENST00000612677|RAB44	26.749707702089633	0.7092085788826945	6				NaN	NaN	0	NaN	1520	2423	3941
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3946	15.181	NaN	10028	30	0	2535.2	0.106	+			44722	TTLLLQHNQ	9	51	356.5330917279699	1066.5774457841098	3	356.5329284667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TTLLLQHNQ_	ENSG00000128606|ENST00000339431|LRRC17;LRRC17|p.K202Nfs*5|1|0.42|ENSG00000128606|chr7:102934514-102934514|A/-|frameshift_variant;LRRC17|p.K424Nfs*12|1|0.42|ENSG00000128606|chr7:102944546-102944546|A/-|frameshift_variant;LRRC17|p.L313*|1|0.16|ENSG00000128606|chr7:102944214-102944214|T/-|frameshift_variant;nc|ENSG00000128606|Q8N6Y2-2|LRRC17	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	1521	2423	3941
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3947	15.182	NaN	10567	30	0	1747.1	0.034	+			34998	SAATHLTSK	9	74	458.24774665079747	914.480940368395	2	458.2481994628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SAATHLTSK_	APPL1|p.L65Kfs*4|1|0.39|ENSG00000157500|chr3:57237529-57237530|TT/-|frameshift_variant;APPL1|p.R154Efs*6|1|0.31|ENSG00000157500|chr3:57242893-57242893|A/-|frameshift_variant;ENSG00000157500|ENST00000288266|APPL1;ENST00000482800.5_1_3:57261911-57301862:+|nuORF	134.7655990226056	0.012935733000282069	6				NaN	NaN	0	NaN	1522	2423	3941
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3948	15.183	NaN	7561	30	0	1337.4	0.14	+			39215	STAEESSPPK	10	72	516.7452272529357	1031.4759015726713	2	516.7464599609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STAEESSPPK_	ENSG00000181555|ENST00000409792|SETD2;nc|ENSG00000181555|Q9BYW2-2|SETD2;nc|ENSG00000181555|Q9BYW2-3|SETD2;SETD2|p.N1396Mfs*16|1|0.42|ENSG00000181555|chr3:47120449-47120449|T/-|frameshift_variant;SETD2|p.R1407Gfs*5|1|0.18|ENSG00000181555|chr3:47120417-47120417|T/-|frameshift_variant;SETD2|p.T1652Yfs*14|1|0.26|ENSG00000181555|chr3:47101519-47101520|-/A|frameshift_variant;SETD2|p.T305Qfs*35|2|0.24|ENSG00000181555|chr3:47123723-47123723|T/-|frameshift_variant	129.42129120953632	0.014023551377083414	6				NaN	NaN	0	NaN	1523	2423	3941
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3966	15.222	NaN	13343	30	0	7176	0.214				-1	 	0	64	413.35720598517685	2061.7496475928842	5	413.5581359863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1538	2426	3965
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3967	15.226	NaN	6026.2	30	0	974.4	0.106	+			32083	QSEAEKLAK	9	66	502.27341649624793	1002.5322800592959	2	502.2294616699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QSEAEKLAK_	ENSG00000147065|ENST00000360270|MSN;ENST00000511640.1_1_5:25909808-25910855:+|nuORF	53.08895987439943	0.27122541748218487	6				NaN	NaN	0	NaN	1539	2426	3965
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3968	15.228	NaN	7145.6	30	0	593.18	0.106			+	-1	DESPGTTR	8	73	452.7042668772809	NaN	0	452.704345703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))DESPGTTR_	REV__ENSG00000120256|ENST00000239367|LRP11;REV__LRP11|p.A362S|1|0.46|ENSG00000120256|chr6:149836253-149836253|C/A|missense_variant	71.29570347882199	1.7418937515398478	6				NaN	NaN	0	NaN	1540	2426	3965
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3969	15.23	NaN	7548.9	30	0	3103.9	0.106				-1	 	0	65	367.55690746516717	1099.6488929957015	3	367.5574035644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1541	2426	3965
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3970	15.232	NaN	3682.6	30	0	383.16	0.106				-1	 	0	61	550.8316694746708	1099.6487860161415	2	550.83251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1542	2426	3965
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3971	15.233	NaN	1123	30	0	176.02	0.038			+	-1	MLMCFVPPFS	10	41	622.7785629934385	1243.542573053677	2	622.77880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))LMC(Carbamidomethyl (C))FVPPFS_	REV__ENST00000485527.5_1_2:75185926-75187326:+|nuORF	30.503639358989545	0.6307262373768582	6				NaN	NaN	0	NaN	1543	2426	3965
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3972	15.234	NaN	2820.8	30	0	566.27	0.142	+			3516	ASSKDAIKK	9	58	474.27894468171354	946.5433364302271	2	474.2795104980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASSKDAIKK_	DSTN|p.Y117H|1|0.26|ENSG00000125868|chr20:17604592-17604592|T/C|missense_variant;ENSG00000125868|ENST00000246069|DSTN;ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000400899.2_1_1:11051144-11051557:-|nuORF;ENST00000530945.1_1_11:65623104-65623215:-|nuORF;nc|ENSG00000125868|P60981-2|DSTN;nc|ENSG00000165410|Q9Y281-3|CFL2	72.87924865735499	0.12833875048249987	6				NaN	NaN	0	NaN	1544	2426	3965
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3990	15.274	NaN	23184	30	0	3080.7	0.214	+			42963	TEKAKEERL	9	83	552.3058250378331	1102.597097142466	2	552.3068237304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEKAKEERL_	ENSG00000149503|ENST00000394818|INCENP;INCENP|p.E620D|1|0.06|ENSG00000149503|chr11:62145652-62145652|G/T|missense_variant;nc|ENSG00000149503|Q9NQS7-2|INCENP	125.71293069911285	0.017741295328254008	6				NaN	NaN	0	NaN	1559	2429	3989
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3991	15.277	NaN	13391	30	0	5657	0.106				-1	 	0	52	351.5325533251662	1051.5758305756985	3	351.5330810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1560	2429	3989
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3992	15.279	NaN	17187	30	0	2310.4	0.106	+			42964	TEKAKEERL	9	84	368.53970882053096	1102.597297061793	3	368.5400695800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TEKAKEERL_	ENSG00000149503|ENST00000394818|INCENP;INCENP|p.E620D|1|0.06|ENSG00000149503|chr11:62145652-62145652|G/T|missense_variant;nc|ENSG00000149503|Q9NQS7-2|INCENP	37.81151784470057	0.4459294069877048	6				NaN	NaN	0	NaN	1561	2429	3989
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3993	15.281	NaN	65114	30	0	16661	0.106				-1	 	0	101	507.8001617169531	1013.5857705007062	2	507.8007507324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1562	2429	3989
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3994	15.283	NaN	6226.8	30	0	1546.5	0.106	+			40238	STSGAISDK	9	51	433.21627789608937	864.4180028589788	2	433.21661376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STSGAISDK_	ENSG00000122512|ENST00000265849|PMS2;nc|ENSG00000122512|P54278-3|PMS2	88.17693792209575	0.07000514020414955	6				NaN	NaN	0	NaN	1563	2429	3989
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3995	15.285	NaN	4295.7	30	0	660.53	0.038	+			34453	RTYDGDGYKK	10	70	401.5315246582031	NaN	0	401.5315246582031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RTYDGDGYKK_	ENSG00000272325|ENST00000607016|NUDT3;NUDT3|p.T76Hfs*5|1|0.07|ENSG00000272325|chr6:34295674-34295674|T/-|frameshift_variant	90.14881205920913	0.053304276504439474	6				NaN	NaN	0	NaN	1564	2429	3989
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3996	15.285	NaN	58698	30	0	16334	0.139	+			50759	YEKKAAKL	8	85	475.7872735835988	949.5599942339976	2	475.7872314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YEKKAAKL_	ENSG00000189403|ENST00000341423|HMGB1;nc|ENSG00000067066|P23497|SP100	98.62937762414208	0.25143494708580966	6				NaN	NaN	0	NaN	1565	2429	3989
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4014	15.324	NaN	85417	30	0	8255.5	0.214	+			2669	AQNAKVIEK	9	105	500.79294842934485	NaN	0	500.7928771972656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AQNAKVIEK_	ENSG00000018610|ENST00000644802|STEEP1;ENST00000469448.1_1_X:118673692-118676584:-|nuORF;nc|ENSG00000018610|Q9H5V9-2|STEEP1;nc|ENSG00000018610|Q9H5V9-3|STEEP1	163.1509380574825	0.013195146407114593	6				NaN	NaN	0	NaN	1580	2432	4013
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4015	15.327	NaN	35923	30	0	6306	0.106	+			3653	ASYGSTTTK	9	74	458.22404581915475	914.4335387051095	2	458.2243347167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASYGSTTTK_	ENSG00000092108|ENST00000458591|SCFD1;ENST00000555259.5_1_14:31112578-31185169:+|nuORF;nc|ENSG00000092108|Q8WVM8-2|SCFD1;nc|ENSG00000092108|Q8WVM8-3|SCFD1	172.24860141594272	0.002383092361811508	6				NaN	NaN	0	NaN	1581	2432	4013
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4016	15.329	NaN	4707.1	30	0	1209	0.106				-1	 	0	50	338.86907989301335	1013.58541027924	3	338.8695983886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1582	2432	4013
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4017	15.331	NaN	18530	30	0	2723.4	0.106	+			34708	RVTYPAKAK	9	73	517.3108403391949	1032.6071277451897	2	517.3115844726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RVTYPAKAK_	ENSG00000118705|ENST00000237530|RPN2;nc|ENSG00000118705|P04844-2|RPN2	51.52775601994872	0.28504342437107444	6				NaN	NaN	0	NaN	1583	2432	4013
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4018	15.333	NaN	158170	30	0	62160	0.106			+	39462	STESDKAKKP	10	90	364.1958081865587	1089.565595159876	3	364.19622802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STESDKAKKP_	REV__chr7:23418824-23468482|212|12.14|0.19|6.03|-|0|IGF2BP3,IGF2BP3|2	30.503639358989545	0.6307262373768582	6				NaN	NaN	0	NaN	1584	2432	4013
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4019	15.335	NaN	4198.2	30	0	616.13	0.033	+			36784	SIAVGTSSLG	10	59	446.24269733812355	890.4708417430471	2	446.24310302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SIAVGTSSLG_	ENST00000469214.2_1_1:193029070-193029313:+|nuORF	49.44154591367651	0.46214596422418036	6				NaN	NaN	0	NaN	1585	2432	4013
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4020	15.335	NaN	4884	30	0	2411.4	0.142			+	41155	SVKFDLRAT	9	45	346.1970328510704	1035.5692691534111	3	346.19775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVKFDLRAT_	REV__ENSG00000110697|ENST00000356404|PITPNM1;REV__ENST00000527370.5_1_11:67264693-67266053:-|nuORF;REV__nc|ENSG00000110697|O00562-2|PITPNM1	27.882242232435846	0.5426732730940306	6				NaN	NaN	0	NaN	1586	2432	4013
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4038	15.373	NaN	4866.8	30	0	786.88	0.214				-1	 	0	61	358.19220604914545	1071.5547887476364	3	358.1927185058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1601	2435	4037
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4039	15.377	NaN	10447	30	0	2448.9	0.106	+			39590	STGRPLGTTK	10	77	509.28757634836165	1016.5605997635233	2	509.2885437011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STGRPLGTTK_	ENSG00000181904|ENST00000394976|C5orf24;nc|nan|Q7Z6I8-2|C5orf24	87.71336657091298	0.14416532007415042	6				NaN	NaN	0	NaN	1602	2435	4037
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4040	15.379	NaN	9373.6	30	0	2091.8	0.106			+	46661	VGEWNLIRGR	10	68	400.55839881809095	NaN	0	400.55841064453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VGEWNLIRGR_	REV__ENSG00000117148|ENST00000375406|ACTL8	42.396135135203025	0.3536752194735987	6				NaN	NaN	0	NaN	1603	2435	4037
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4041	15.381	NaN	2382.4	30	0	369.44	0.106	+			30646	QATGGAAK	8	40	352.18914794921875	NaN	0	352.18914794921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QATGGAAK_	ENSG00000133104|ENST00000438666|SPART;ENST00000475603.5_1_13:36886596-36900733:-|nuORF;ENST00000482146.1_1_13:36888157-36888547:-|nuORF;SPG20|p.T655Rfs*4|1|0.63|ENSG00000133104|chr13:36304402-36304402|G/-|frameshift_variant	30.503639358989545	1.7418937515398478	6				NaN	NaN	0	NaN	1604	2435	4037
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4042	15.383	NaN	69817	30	0	20058	0.106	+			44598	TTCSKVFKK	9	97	366.8701398331989	1097.5885900997966	3	366.8707580566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_TTC(Carbamidomethyl (C))SKVFKK_	ENSG00000167625|ENST00000301215|ZNF526	63.53385203322761	0.18415635464017938	6				NaN	NaN	0	NaN	1605	2435	4037
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4043	15.385	NaN	11865	30	0	6337.9	0.038			+	-1	QKQKEVMEK	9	41	388.53978476509434	NaN	0	388.5399169921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_QKQKEVM(Oxidation (M))EK_	REV__ENSG00000111011|ENST00000331738|RSRC2;REV__ENST00000392442.6_1_12:122990076-122998315:-|nuORF;REV__ENST00000433877.6_1_12:122990076-123005058:-|nuORF;REV__nc|ENSG00000111011|Q7L4I2-2|RSRC2;REV__RSRC2|p.R335Gfs*23|1|0.06|ENSG00000111011|chr12:122508250-122508250|T/-|frameshift_variant	37.81151784470057	0.28666463014928195	6				NaN	NaN	0	NaN	1606	2435	4037
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4044	15.385	NaN	7854.2	30	0	2420.1	0.142				-1	KGMKAFKQPA	10	49	374.5433575956414	1120.6082433871243	3	374.5437316894531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_KGM(Oxidation (M))KAFKQPA_	ENST00000604297.1_1_X:46421090-46422044:-|nuORF	28.081489160057373	0.6505064946289502	6				NaN	NaN	0	NaN	1607	2435	4037
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4062	15.423	NaN	483720	30	0	56526	0.172			+	39163	SSVTRPVQK	9	124	501.29013515831207	1000.5657173834242	2	501.29052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSVTRPVQK_	REV__DLGAP5|p.E743Rfs*25|1|0.45|ENSG00000126787|chr14:55151836-55151837|-/T|frameshift_variant;REV__ENSG00000126787|ENST00000247191|DLGAP5;REV__nc|ENSG00000126787|Q15398-1|DLGAP5;REV__nc|ENSG00000126787|Q15398-3|DLGAP5	99.01295224348159	0.040209060045561164	6				NaN	NaN	0	NaN	1622	2438	4061
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4063	15.426	NaN	28971	30	0	10003	0.106	+			15562	GVFKETKQK	9	74	355.54093644363485	1063.6009799311046	3	355.5414123535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GVFKETKQK_	ENSG00000119927|ENST00000348367|GPAM	84.9155231211612	0.07920012719736333	6				NaN	NaN	0	NaN	1623	2438	4061
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4064	15.428	NaN	24232	30	0	5395.1	0.106	+			35367	SAPRHGSL	8	63	412.72219598826047	NaN	0	412.72216796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAPRHGSL_	ENSG00000100316|ENST00000216146|RPL3;ENST00000460589.5_1_22:39713464-39715412:-|nuORF;ENST00000465618.5_1_22:39712851-39715803:-|nuORF;ENST00000484615.5_1_22:39713464-39715605:-|nuORF	49.44154591367651	1.7418937515398478	6				NaN	NaN	0	NaN	1624	2438	4061
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4065	15.43	NaN	11298	30	0	6259.2	0.106			+	31241	QHDQTQGQTQQ	11	62	649.7904373572089	1297.5663217812178	2	649.7894897460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QHDQTQGQTQQ_	REV__MAGEB3|p.R19Q|1|0.13|ENSG00000198798|chrX:30235980-30235980|G/A|missense_variant	56.43379154798735	0.3552884390983883	6				NaN	NaN	0	NaN	1625	2438	4061
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4066	15.432	NaN	15606	30	0	5423.8	0.106	+			7042	CSSLMLIE	8	66	448.2167786215893	NaN	0	448.2167663574219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_CSSLMLIE_	ENSG00000126822|ENST00000247226|PLEKHG3;nc|ENSG00000126822|A1L390-3|PLEKHG3;PLEKHG3|p.P557Qfs*19|1|0.1|ENSG00000126822|chr14:64741182-64741182|C/-|frameshift_variant	33.51558372728122	1.7418937515398478	6				NaN	NaN	0	NaN	1626	2438	4061
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4067	15.434	NaN	4533.4	30	0	673.47	0.106	+			3393	ASQEGTIQK	9	58	481.25033994320864	960.4861269532173	2	481.2510070800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASQEGTIQK_	ENSG00000172349|ENST00000683961|IL16;nc|ENSG00000172349|Q14005-2|IL16;nc|ENSG00000172349|Q14005-3|IL16;nc|ENSG00000172349|Q14005-4|IL16	78.26377905018397	0.10505600812668463	6				NaN	NaN	0	NaN	1627	2438	4061
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4068	15.436	NaN	29201	30	0	3342.2	0.036	+			22881	KVLKILEEE	9	68	550.8316694746708	1099.6487860161415	2	550.8121948242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KVLKILEEE_	tr|U7SUI2|U7SUI2_FUSNUUPF0597proteinHMPREF1766_01169OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01169PE=3SV=1	46.45678178249821	0.34452392205506005	6				NaN	NaN	0	NaN	1628	2438	4061
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4104	15.507	NaN	129630	30	0	69911	0.162	+			5226	ATTTTVTTK	9	66	462.25526805507377	922.4959831769476	2	462.25567626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATTTTVTTK_	ENSG00000163349|ENST00000426820|HIPK1;HIPK1|p.N462*|1|0.27|ENSG00000163349|chr1:113955620-113955621|-/T|frameshift_variant;nc|ENSG00000163349|Q86Z02-2|HIPK1	146.78539889680295	0.007618400906539062	6				NaN	NaN	0	NaN	1658	2444	4103
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4105	15.509	NaN	37085	30	0	22204	0.106				-1	 	0	65	413.226358769567	824.438164605934	2	413.2267761230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1659	2444	4103
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4106	15.512	NaN	5045.8	30	0	546.24	0.106			+	19998	KEIEQLSIL	9	70	536.8189510735573	NaN	0	536.819091796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEIEQLSIL_	REV__ENST00000525040.5_1_11:9801967-9809483:-|nuORF	59.93077597824379	0.14961415694175798	6				NaN	NaN	0	NaN	1660	2444	4103
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4107	15.513	NaN	4694.7	30	0	478.83	0.106			+	600	ADPEVTDPQQ	10	59	550.251117256842	1098.487681580484	2	550.251708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ADPEVTDPQQ_	REV__ENSG00000170558|ENST00000269141|CDH2;REV__nc|ENSG00000170558|P19022-2|CDH2	45.97224482568171	0.49411383603842696	6				NaN	NaN	0	NaN	1661	2444	4103
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4108	15.515	NaN	10965	30	0	2421.3	0.106				-1	 	0	71	511.2702410249717	1020.5259291167434	2	512.2816772460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1662	2444	4103
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4109	15.517	NaN	4288.5	30	0	2147.7	0.106	+			24640	LGSTIDKAT	9	55	453.250029516137	904.485506099074	2	453.25048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LGSTIDKAT_	ENSG00000172053|ENST00000306125|QARS1;ENST00000479495.5_1_3:49140063-49142467:-|nuORF;ENST00000482438.2_1_3:49141637-49142166:-|nuORF;nc|ENSG00000172053|P47897-2|QARS1	27.882242232435846	0.5426732730940306	6				NaN	NaN	0	NaN	1663	2444	4103
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4110	15.519	NaN	2422	30	0	581.1	0.037			+	33160	RETGESQYR	9	59	563.2684532642967	NaN	0	563.2685546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RETGESQYR_	REV__FLG|p.H3957R|1|0.15|ENSG00000143631|chr1:152303016-152303016|T/C|missense_variant	45.97224482568171	0.23445038899310136	6				NaN	NaN	0	NaN	1664	2444	4103
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4128	15.556	NaN	39463	30	0	6740.4	0.208	+			2925	ASCNQTLSK	9	79	504.741449590306	1007.468346247412	2	504.7422790527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_ASC(Carbamidomethyl (C))NQTLSK_	ENSG00000155256|ENST00000684270|ZFYVE27;ENST00000477521.5_1_10:99516996-99519054:+|nuORF;nc|ENSG00000155256|Q5T4F4-2|ZFYVE27;nc|ENSG00000155256|Q5T4F4-3|ZFYVE27;nc|ENSG00000155256|Q5T4F4-5|ZFYVE27;nc|ENSG00000155256|Q5T4F4-6|ZFYVE27;nc|ENSG00000155256|Q5T4F4-7|ZFYVE27;nc|ENSG00000155256|Q5T4F4-8|ZFYVE27	227.98784680455424	8.785665227322961E-13	6				NaN	NaN	0	NaN	1679	2447	4127
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4129	15.559	NaN	11492	30	0	2593.3	0.106				-1	 	0	81	511.2702410249717	1020.5259291167434	2	511.2710266113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1680	2447	4127
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4130	15.561	NaN	6437.2	30	0	1052.1	0.106	+			34446	RTVSDSIKK	9	59	517.3032585195981	1032.591964105996	2	517.3038330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RTVSDSIKK_	ENSG00000137076|ENST00000314888|TLN1;nc|ENSG00000137076|Q9Y490-2|TLN1	83.6470233535746	0.08277643980271215	6				NaN	NaN	0	NaN	1681	2447	4127
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4131	15.563	NaN	5574.8	30	0	1172.8	0.106	+			40829	SVEGPSQAK	9	56	451.73194632299277	901.4493397127856	2	451.7320861816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVEGPSQAK_	ENSG00000196924|ENST00000369850|FLNA;FLNA|p.A1026Lfs*20|1|0.42|ENSG00000196924|chrX:154361439-154361439|C/-|frameshift_variant;FLNA|p.G2237Efs*109|1|0.28|ENSG00000196924|chrX:154352240-154352240|C/-|frameshift_variant;FLNA|p.Q1716Sfs*23|2|0.38|ENSG00000196924|chrX:154354896-154354896|G/-|frameshift_variant;FLNA|p.R2520Vfs*16|1|0.7|ENSG00000196924|chrX:154349560-154349560|G/-|frameshift_variant;nc|ENSG00000196924|P21333-2|FLNA	47.95952297671804	0.32689736945648856	6				NaN	NaN	0	NaN	1682	2447	4127
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4132	15.565	NaN	2480.9	30	0	524.87	0.106				-1	 	0	43	327.1838849759566	652.3532170187132	2	327.184326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1683	2447	4127
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4133	15.566	NaN	2831.8	30	0	470.57	0.035				-1	 	0	56	334.2213149875617	999.6421155628851	3	334.22186279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1684	2447	4127
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4134	15.567	NaN	7088	30	0	880.96	0.137				-1	 	0	60	419.2319718765424	836.4493908198848	2	419.2323303222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1685	2447	4127
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4152	15.607	NaN	43555	30	0	22268	0.214	+			409	AASSSSLEK	9	65	440.22407920292125	878.4336054726425	2	440.2245788574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AASSSSLEK_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196834|ENST00000451531|POTEI;ENST00000417985.1_1_X:46147855-46148119:-|nuORF;ENST00000418987.2_1_9:103493819-103494230:+|nuORF;ENST00000423183.1_1_3:12112396-12112453:+|nuORF;ENST00000450451.1_1_1:238090483-238090852:+|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2	112.41091882917199	0.026537921851008135	6				NaN	NaN	0	NaN	1700	2450	4151
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4153	15.61	NaN	14715	30	0	3884.1	0.106	+			31235	QHADEIYHQTA	11	75	656.79872770522	1311.58290247724	2	656.7977294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QHADEIYHQTA_	ENSG00000136925|ENST00000341170|TSTD2;ENST00000375165.5_1_9:100368507-100388213:-|nuORF	54.343338949951054	0.37394860514808087	6				NaN	NaN	0	NaN	1701	2450	4151
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4154	15.612	NaN	17846	30	0	5751.6	0.106				-1	 	0	62	350.87277907747284	1049.5965078326185	3	350.8732604980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1702	2450	4151
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4155	15.614	NaN	99790	30	0	16962	0.106	+			41607	SVQHVDAAEK	10	92	542.2738914286871	1082.533229924174	2	542.2755737304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVQHVDAAEK_	ENST00000585682.5_1_4:159092526-159092595:-|nuORF	150.15188659993407	0.008468567113416427	6				NaN	NaN	0	NaN	1703	2450	4151
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4156	15.616	NaN	3640.8	30	0	1033.6	0.106			+	24706	LHGDKGTCK	9	49	479.74203261589133	NaN	0	479.7420959472656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LHGDKGTCK_	REV__ENSG00000175073|ENST00000310421|VCPIP1;REV__VCPIP1|p.A460Qfs*2|1|0.36|ENSG00000175073|chr8:66665582-66665582|T/-|frameshift_variant;REV__VCPIP1|p.K1108Nfs*37|1|0.15|ENSG00000175073|chr8:66634846-66634846|T/-|frameshift_variant	27.882242232435846	0.3367954786602879	6				NaN	NaN	0	NaN	1704	2450	4151
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4157	15.618	NaN	1940.2	30	0	249.39	0.037	+			19829	KEDREKEQL	9	55	587.8063312138496	1173.598109494499	2	587.807373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KEDREKEQL_	ENSG00000178913|ENST00000313368|TAF7	80.45461616416974	0.09558281504443908	6				NaN	NaN	0	NaN	1705	2450	4151
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4158	15.618	NaN	16449	30	0	3701.6	0.141			+	40261	STSPFGAGCLQ	11	80	534.245574983504	1066.4765970338078	2	534.2469482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STSPFGAGCLQ_	REV__BACE1|p.L222Sfs*14|1|0.29|ENSG00000186318|chr11:117293912-117293912|G/-|frameshift_variant	69.6276240434122	0.23884409287757344	6				NaN	NaN	0	NaN	1706	2450	4151
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4176	15.658	NaN	21457	30	0	6501.6	0.214	+			41608	SVQHVDAAEK	10	77	361.85240499106897	1082.535385573407	3	361.85247802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVQHVDAAEK_	ENST00000585682.5_1_4:159092526-159092595:-|nuORF	70.39856735676683	0.27406383984062843	6				NaN	NaN	0	NaN	1721	2453	4175
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4177	15.661	NaN	4903.2	30	0	1630.2	0.106			+	-1	KGFRPMQI	8	63	496.77201251294423	NaN	0	496.7720031738281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_KGFRPM(Oxidation (M))QI_	REV__ENSG00000083799|ENST00000427738|CYLD;REV__nc|ENSG00000083799|Q9NQC7-2|CYLD	57.81127852772723	1.7418937515398478	6				NaN	NaN	0	NaN	1722	2453	4175
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4178	15.663	NaN	2781.5	30	0	337.79	0.106	+			6094	AVNKQLADK	9	61	493.78433613072775	985.5541193282555	2	493.7848815917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVNKQLADK_	ENSG00000166595|ENST00000422424|CIAO2B;ENST00000562362.5_1_16:66966108-66968009:-|nuORF	88.17693792209575	0.07000514020414955	6				NaN	NaN	0	NaN	1723	2453	4175
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4179	15.665	NaN	2269.6	30	0	1183.9	0.106				-1	EMRAITSQTC	10	39	606.7711791992188	NaN	0	606.7711791992188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_EM(Oxidation (M))RAITSQTC(Carbamidomethyl (C))_	ENST00000393158.6_1_11:103870935-104034591:-|nuORF	36.446750945000026	0.3805027428805705	6				NaN	NaN	0	NaN	1724	2453	4175
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4180	15.667	NaN	7358.2	30	0	1324.8	0.106			+	33253	RGEGGRLGTGA	11	78	515.7742326010994	1029.5339122689986	2	515.7763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RGEGGRLGTGA_	REV__ENST00000483155.5_1_9:79007484-79008822:-|nuORF	67.49366992349736	0.25663419177724	6				NaN	NaN	0	NaN	1725	2453	4175
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4181	15.669	NaN	3473.9	30	0	2077.7	0.033			+	33293	RGPELDGPG	9	53	449.22493805158155	NaN	0	449.22467041015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RGPELDGPG_	REV__ENST00000468655.1_1_19:49994004-49994437:+|nuORF	24.20275056022122	0.35506675290109213	6				NaN	NaN	0	NaN	1726	2453	4175
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4182	15.669	NaN	7452.1	30	0	986.34	0.142				-1	RLLDMDVI	8	52	330.84776873703754	989.5214768113126	3	330.5139465332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_RLLDM(Oxidation (M))DVI_	EIF3A|p.G346V|1|0.29|ENSG00000107581|chr10:119065484-119065484|C/A|missense_variant	31.954861631926434	0.7126016770032289	6				NaN	NaN	0	NaN	1727	2453	4175
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4201	15.707	NaN	26879	30	0	17245	0.21				-1	 	0	57	364.207882335093	1089.601817605479	3	364.2082214355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1743	2456	4200
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4202	15.711	NaN	15477	30	0	1834.9	0.106	+			35975	SEGTKAVTK	9	77	460.7550750740949	919.4955972149899	2	460.755615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEGTKAVTK_	ENSG00000124635|ENST00000339812|H2BC11;ENSG00000146047|ENST00000274764|H2BC1;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000196890|ENST00000693095|H2BC26;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000369385.5_1_1:149814898-149814982:+|nuORF;ENST00000436555.1_1_1:228651916-228652012:-|nuORF;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;HIST1H2BD|p.Y122H|1|0.36|ENSG00000158373|chr6:26158533-26158533|T/C|missense_variant;nc|ENSG00000203814|Q5QNW6-2|H2BC18;nc|ENSG00000285480|A0A2R8Y619|H2BK1	173.39201167336012	0.002187917786942103	6				NaN	NaN	0	NaN	1744	2456	4200
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4203	15.713	NaN	4257.9	30	0	852.12	0.106			+	21957	KSAVSALR	8	61	416.2554473067629	830.4963416803258	2	416.25592041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KSAVSALR_	REV__ENSG00000154864|ENST00000674853|PIEZO2;REV__nc|ENSG00000154864|Q9H5I5-2|PIEZO2;REV__nc|ENSG00000154864|Q9H5I5-4|PIEZO2;REV__nc|ENSG00000154864|Q9H5I5|PIEZO2;REV__PIEZO2|p.E2492Kfs*3|1|0.27|ENSG00000154864|chr18:10680339-10680339|T/-|frameshift_variant;REV__PIEZO2|p.L2716Ffs*33|1|0.12|ENSG00000154864|chr18:10671638-10671639|-/A|frameshift_variant;REV__PIEZO2|p.Y2489Sfs*7|1|0.06|ENSG00000154864|chr18:10680346-10680347|-/GG|frameshift_variant	34.172542307311794	0.6954784234644539	6				NaN	NaN	0	NaN	1745	2456	4200
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4204	15.715	NaN	2958.7	30	0	1169.5	0.106			+	6359	AVTSRRRR	8	38	334.5409550462149	1000.6010357388448	3	334.5415344238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVTSRRRR_	REV__ENST00000329759.5_1_3:194408823-194409108:+|nuORF	18.324413293986947	0.7971860551947066	6				NaN	NaN	0	NaN	1746	2456	4200
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4205	15.717	NaN	8590.6	30	0	1402.9	0.106			+	4650	ATLQDQIEQFQ	11	73	440.8858355817663	1319.6356773454988	3	440.8860778808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATLQDQIEQFQ_	REV__ENSG00000135976|ENST00000420699|ANKRD36;REV__ENSG00000174501|ENST00000295246|ANKRD36C;REV__ENSG00000196912|ENST00000359901|ANKRD36B;REV__ENST00000494336.1_1_2:97911343-97914952:+|nuORF;REV__nc|ENSG00000174501|Q5JPF3-2|ANKRD36C;REV__nc|ENSG00000174501|Q5JPF3|ANKRD36C	28.5767321226876	0.690044582712672	6				NaN	NaN	0	NaN	1747	2456	4200
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4206	15.718	NaN	7028.9	30	0	2720.5	0.038				-1	QESAMDKHNL	10	69	594.7682663083818	1187.5219796835636	2	594.7694091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_QESAM(Oxidation (M))DKHNL_	ENSG00000077235|ENST00000356183|GTF3C1;GTF3C1|p.L1167Sfs*9|1|0.07|ENSG00000077235|chr16:27488566-27488566|G/-|frameshift_variant;GTF3C1|p.P1914Qfs*30|1|0.16|ENSG00000077235|chr16:27464451-27464451|G/-|frameshift_variant;GTF3C1|p.V2028Sfs*25|1|0.14|ENSG00000077235|chr16:27462329-27462329|C/-|frameshift_variant;nc|ENSG00000077235|Q12789-3|GTF3C1	65.46538089061403	0.31613324008013116	6				NaN	NaN	0	NaN	1748	2456	4200
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4207	15.719	NaN	11779	30	0	2617.1	0.142	+			17133	HSRNEGTATY	10	77	568.2593128908472	1134.5040728484944	2	568.2603149414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HSRNEGTATY_	ENSG00000173801|ENST00000393931|JUP;JUP|p.A645T|1|0.28|ENSG00000173801|chr17:41757528-41757528|C/T|missense_variant	173.39201167336012	0.002607008819474693	6				NaN	NaN	0	NaN	1749	2456	4200
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4225	15.757	NaN	36202	30	0	9707	0.214				-1	 	0	82	332.8654712594945	995.5745843786835	3	332.86602783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1764	2459	4224
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4226	15.76	NaN	7541.1	30	0	1738.2	0.106				-1	WMVKDLQHHC	10	77	685.3108203804627	1368.6070878277253	2	685.30859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_WM(Oxidation (M))VKDLQHHC(Carbamidomethyl (C))_	ENSG00000160712|ENST00000368485|IL6R;nc|ENSG00000160712|P08887-2|IL6R	40.77816245573522	0.5419747034533848	6				NaN	NaN	0	NaN	1765	2459	4224
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4227	15.762	NaN	15530	30	0	3959	0.106	+			18919	IVNASTTNK	9	65	474.26073481813154	946.5069167030631	2	474.26129150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IVNASTTNK_	ENSG00000078269|ENST00000355585|SYNJ2;nc|ENSG00000078269|O15056-2|SYNJ2;nc|ENSG00000078269|O15056-3|SYNJ2;SYNJ2|p.L1226Tfs*32|1|0.22|ENSG00000078269|chr6:158093029-158093030|-/C|frameshift_variant;SYNJ2|p.P1225Hfs*19|1|0.23|ENSG00000078269|chr6:158093030-158093030|C/-|frameshift_variant	126.24258497203832	0.01742065577488747	6				NaN	NaN	0	NaN	1766	2459	4224
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4228	15.764	NaN	34616	30	0	14311	0.106				-1	 	0	76	498.7947013389737	995.5748497447474	2	498.7952575683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1767	2459	4224
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4229	15.766	NaN	5236	30	0	2249.8	0.106	+			51569	YYITTRLFW	9	47	421.55711725462834	1261.649522364085	3	421.5575866699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YYITTRLFW_	ENSG00000164023|ENST00000690982|SGMS2;ENSG00000198964|ENST00000361781|SGMS1;nc|ENSG00000198964|Q86VZ5-2|SGMS1	20.94693142431847	0.6074874384046576	6				NaN	NaN	0	NaN	1768	2459	4224
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4230	15.768	NaN	3686.4	30	0	1000.9	0.034	+			4719	ATMATSGSAR	10	57	476.72853220098864	951.4425114687773	2	476.7293701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATMATSGSAR_	ENSG00000141543|ENST00000649764|EIF4A3;ENST00000575957.1_1_17:78115565-78120760:-|nuORF	63.53385203322761	0.33370026130094593	6				NaN	NaN	0	NaN	1769	2459	4224
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4231	15.768	NaN	18083	30	0	2607.8	0.14	+			13744	GQCGNQIGAK	10	76	516.7472708048272	1031.4799886764542	2	516.7484130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_GQC(Carbamidomethyl (C))GNQIGAK_	CON__ENSEMBL:ENSBTAP00000025008;ENSG00000101162|ENST00000217133|TUBB1;ENSG00000104833|ENST00000264071|TUBB4A;ENSG00000137267|ENST00000333628|TUBB2A;ENSG00000137285|ENST00000259818|TUBB2B;ENSG00000173213|ENST00000308911|TUBB8B;ENSG00000188229|ENST00000340384|TUBB4B;ENSG00000196230|ENST00000327892|TUBB;ENSG00000258947|ENST00000315491|TUBB3;ENSG00000261456|ENST00000568584|TUBB8;ENST00000489942.1_1_6:3155224-3157697:-|nuORF;ENST00000554116.5_1_16:89989809-89998148:+|nuORF;ENST00000554927.1_1_16:89989809-89999206:+|nuORF;ENST00000604929.1_1_9:140135770-140136775:+|nuORF;TUBB|p.G142Afs*23|1|0.35|ENSG00000196230|chr6:30723483-30723483|G/-|frameshift_variant;TUBB2B|p.D177Hfs*21|1|0.32|ENSG00000137285|chr6:3225559-3225560|TC/-|frameshift_variant;TUBB4A|p.G141Vfs*24|2|0.35|ENSG00000104833|chr19:6496077-6496077|C/-|frameshift_variant	139.97047562133406	0.010761959789928152	6				NaN	NaN	0	NaN	1770	2459	4224
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4249	15.808	NaN	7451.8	30	0	784.56	0.214	+			21680	KQEELARK	8	73	501.29013515831207	1000.5657173834242	2	501.2904357910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KQEELARK_	ENSG00000151838|ENST00000537690|CCDC175	85.16082228582465	0.29211966821764696	6				NaN	NaN	0	NaN	1785	2462	4248
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4250	15.811	NaN	9666.2	30	0	5474.9	0.106	+			568	ADGQPRWRP	9	50	361.5206554801128	NaN	0	361.5206298828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ADGQPRWRP_	ENST00000460265.5_1_5:126112743-126113319:+|nuORF;ENST00000492190.5_1_5:126112854-126113319:+|nuORF	30.317721548370564	0.32449924987115025	6				NaN	NaN	0	NaN	1786	2462	4248
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4251	15.814	NaN	22440	30	0	3900.4	0.106	+			39238	STAKHVFEK	9	92	523.7845215357753	1045.5544901383505	2	523.785400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STAKHVFEK_	ENSG00000184445|ENST00000333479|KNTC1;ENST00000436959.7_1_12:123087118-123101977:+|nuORF;KNTC1|p.K1646Nfs*2|2|0.35|ENSG00000184445|chr12:122603073-122603073|A/-|frameshift_variant;KNTC1|p.K1646Tfs*12|1|0.13|ENSG00000184445|chr12:122603073-122603074|AA/-|frameshift_variant;KNTC1|p.L1647Tfs*12|1|0.3|ENSG00000184445|chr12:122603072-122603073|-/A|frameshift_variant;nc|ENSG00000184445|P50748-2|KNTC1	120.30596017624542	0.02101454110788768	6				NaN	NaN	0	NaN	1787	2462	4248
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4252	15.815	NaN	6656.8	30	0	1503.2	0.106	+			22207	KSTSFRPG	8	61	440.2372350426387	878.4599171520774	2	440.23748779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KSTSFRPG_	ENSG00000143379|ENST00000692827|SETDB1;nc|ENSG00000143379|Q15047-3|SETDB1;nc|ENSG00000143379|Q15047|SETDB1	45.9519527083369	0.6193794311207887	6				NaN	NaN	0	NaN	1788	2462	4248
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4253	15.817	NaN	1472	30	0	282.87	0.106			+	9878	EQIEQEPFN	9	52	567.2576732252719	NaN	0	567.2576904296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EQIEQEPFN_	REV__ENSG00000124201|ENST00000396105|ZNFX1	40.77816245573522	0.2702456086868081	6				NaN	NaN	0	NaN	1789	2462	4248
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4254	15.819	NaN	6243	30	0	1393.8	0.038			+	22484	KTNEFAPLLR	10	69	594.8409197986655	1187.6672866641309	2	594.8419799804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KTNEFAPLLR_	REV__ENSG00000134109|ENST00000256497|EDEM1;REV__nc|ENSG00000134109|Q92611-2|EDEM1	66.96192283764107	0.30252237217063654	6				NaN	NaN	0	NaN	1790	2462	4248
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4255	15.82	NaN	1447.3	30	0	356	0.141			+	-1	KSCSSKSSR	9	59	513.7554931640625	NaN	0	513.7554931640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_KSC(Carbamidomethyl (C))SSKSSR_	REV__ENSG00000203933|ENST00000370540|CXorf66	45.97224482568171	0.23445038899310136	6				NaN	NaN	0	NaN	1791	2462	4248
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4273	15.859	NaN	137600	30	0	25613	0.182				-1	 	0	89	466.7791504989136	931.5437480646273	2	466.7793884277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1806	2465	4272
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4274	15.862	NaN	9653.1	30	0	1260.5	0.106			+	31772	QPHNTQLQ	8	69	483.24290221053036	964.4712514878607	2	483.24322509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QPHNTQLQ_	REV__ENST00000452463.5_1_7:137600644-137612913:-|nuORF	60.97194046774394	0.49215940876911696	6				NaN	NaN	0	NaN	1807	2465	4272
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4275	15.864	NaN	8407.9	30	0	959.7	0.106			+	31035	QEVDFPVKI	9	81	537.792750321571	1073.570947709942	2	537.8009643554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QEVDFPVKI_	REV__ENSG00000142102|ENST00000409548|PGGHG;REV__ENST00000474221.5_1_11:293333-294746:+|nuORF;REV__ENST00000476372.1_1_11:293333-293657:+|nuORF	110.11987700582712	0.028875675806141952	6				NaN	NaN	0	NaN	1808	2465	4272
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4276	15.866	NaN	14806	30	0	9297	0.106				-1	 	0	56	413.226358769567	824.438164605934	2	413.2266845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1809	2465	4272
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4277	15.867	NaN	6786.7	30	0	2059.3	0.106	+			14695	GTIGKKFARK	10	52	369.2324963611484	1104.675659683645	3	369.2327880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTIGKKFARK_	ENSG00000135698|ENST00000258169|MPHOSPH6	42.396135135203025	0.5270658956260207	6				NaN	NaN	0	NaN	1810	2465	4272
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4278	15.869	NaN	3538.5	30	0	821.26	0.106				-1	 	0	49	446.7397586453423	891.4649643574846	2	446.74017333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1811	2465	4272
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4279	15.871	NaN	3592.9	30	0	610.7	0.037	+			21149	KKTKNSDIKV	10	62	580.853271484375	NaN	0	580.853271484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KKTKNSDIKV_	tr|U7T564|U7T564_FUSNUDNArepairproteinRadAOS=FusobacteriumnucleatumCTI-5OX=1316586GN=radAPE=3SV=1	49.536043120802724	0.30853568297719935	6				NaN	NaN	0	NaN	1812	2465	4272
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4297	15.907	NaN	17825	30	0	3943.2	0.214				-1	 	0	79	499.76060852061204	997.5066641080241	2	499.76104736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1827	2468	4296
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4298	15.91	NaN	10268	30	0	965.19	0.106	+			25848	LSEREEALK	9	87	537.792750321571	1073.570947709942	2	537.7938842773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSEREEALK_	ENSG00000129422|ENST00000693296|MTUS1;ENST00000521635.5_1_8:17532522-17541986:-|nuORF;nc|ENSG00000129422|Q9ULD2-2|MTUS1;nc|ENSG00000129422|Q9ULD2-3|MTUS1;nc|ENSG00000129422|Q9ULD2-6|MTUS1;nc|ENSG00000129422|Q9ULD2-7|MTUS1	72.87924865735499	0.12833875048249987	6				NaN	NaN	0	NaN	1828	2468	4296
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4299	15.912	NaN	10882	30	0	1904.2	0.106			+	-1	QLVCAAQQ	8	60	459.2282372668427	916.4419216004854	2	459.22894287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_QLVC(Carbamidomethyl (C))AAQQ_	REV__ENST00000539429.1_1_12:124144026-124144779:+|nuORF	55.50420428727701	0.5462892107279674	6				NaN	NaN	0	NaN	1829	2468	4296
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4300	15.914	NaN	4765.1	30	0	516.76	0.106			+	24983	LLDTGTAVR	9	56	473.27122816178587	944.5279033903718	2	473.271728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LLDTGTAVR_	REV__ALOX12B|p.L451Afs*27|2|0.33|ENSG00000179477|chr17:8076668-8076669|-/C|frameshift_variant;REV__ALOX12B|p.L451Sfs*16|1|0.1|ENSG00000179477|chr17:8076669-8076669|C/-|frameshift_variant;REV__ENSG00000179477|ENST00000647874|ALOX12B	37.15910966729921	0.4535818937225704	6				NaN	NaN	0	NaN	1830	2468	4296
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4301	15.916	NaN	3684.6	30	0	1048.9	0.106			+	38365	SRRPLVLLLA	10	47	379.92049388226906	1136.7396522470071	3	380.1999206542969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SRRPLVLLLA_	REV__ENST00000371799.8_1_9:137968766-137969066:+|nuORF	12.811709888998246	0.7513471912541434	6				NaN	NaN	0	NaN	1831	2468	4296
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4302	15.918	NaN	27196	30	0	9793.8	0.038			+	39248	STALPGRTPRP	11	60	384.8873381315437	1151.640184994831	3	384.8877258300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STALPGRTPRP_	REV__nc|ENSG00000170190|O15375-2|SLC16A5	42.33807565288922	0.5259510355945483	6				NaN	NaN	0	NaN	1832	2468	4296
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4303	15.918	NaN	983.81	30	0	99.003	0.141			+	20999	KKGPIIQPML	10	51	562.8489990234375	NaN	0	562.8489990234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KKGPIIQPML_	REV__ENSG00000139324|ENST00000266712|TMTC3;REV__nc|ENSG00000139324|Q6ZXV5|TMTC3;REV__TMTC3|p.C759Mfs*3|1|0.29|ENSG00000139324|chr12:88195171-88195172|-/A|frameshift_variant;REV__TMTC3|p.K758Nfs*31|1|0.16|ENSG00000139324|chr12:88195172-88195172|A/-|frameshift_variant	28.081489160057373	0.40797012399963245	6				NaN	NaN	0	NaN	1833	2468	4296
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4321	15.957	NaN	88419	30	0	16914	0.154	+			6336	AVTKYTSAK	9	88	484.77346004761193	967.5323671620239	2	484.7740173339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVTKYTSAK_	ENSG00000124635|ENST00000339812|H2BC11;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000234289|ENST00000599962|H2BC12L	169.6522961985778	0.0028262690464207238	6				NaN	NaN	0	NaN	1848	2471	4320
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4322	15.96	NaN	57906	30	0	22086	0.106				-1	 	0	92	362.9041360865818	1085.6905788599454	3	362.9045715332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1849	2471	4320
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4323	15.962	NaN	11120	30	0	2106	0.106	+			16298	HEHGQLHSM	9	81	538.2397127312471	1074.464872529294	2	538.240966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HEHGQLHSM_	ENSG00000196504|ENST00000545856|PRPF40A;nc|ENSG00000196504|O75400-2|PRPF40A;nc|ENSG00000196504|O75400-3|PRPF40A;nc|ENSG00000196504|O75400|PRPF40A	90.60085204095205	0.06317133949006545	6				NaN	NaN	0	NaN	1850	2471	4320
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4324	15.964	NaN	4372.8	30	0	847.95	0.106			+	-1	LRSPGCTPGLF	11	62	602.8110078957391	1203.607462858278	2	602.8121337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_LRSPGC(Carbamidomethyl (C))TPGLF_	REV__ENST00000425630.1_1_10:1209489-1209807:+|nuORF	31.634271133179894	0.6579734920221648	6				NaN	NaN	0	NaN	1851	2471	4320
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4325	15.966	NaN	9527.9	30	0	2522.1	0.106	+			18483	ISGEPTSL	8	65	402.210341456188	NaN	0	402.2104187011719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ISGEPTSL_	ENSG00000205277|ENST00000536621|MUC12;nc|ENSG00000205277|Q9UKN1|MUC12	38.80614096846853	1.7418937515398478	6				NaN	NaN	0	NaN	1852	2471	4320
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4326	15.967	NaN	11198	30	0	1567.4	0.106			+	22397	KTINQVKKK	9	64	543.8525629266325	1085.6905729200648	2	543.8536987304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KTINQVKKK_	REV__ENSG00000079215|ENST00000265113|SLC1A3;REV__ENST00000502864.5_1_5:36608606-36630112:+|nuORF;REV__ENST00000504121.5_1_5:36608525-36608720:+|nuORF;REV__ENST00000506725.1_1_5:36608525-36613071:+|nuORF;REV__nc|ENSG00000079215|P43003-2|SLC1A3;REV__SLC1A3|p.V319Efs*4|1|0.04|ENSG00000079215|chr5:36679719-36679720|-/AGAAATTT|frameshift_variant	89.02883481214508	0.06760336634167786	6				NaN	NaN	0	NaN	1853	2471	4320
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4327	15.969	NaN	3796.5	30	0	352.29	0.035			+	9117	EGLCLEGKK	9	65	517.27130622322	NaN	0	517.2710571289062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_EGLC(Carbamidomethyl (C))LEGKK_	REV__ENST00000374530.7_2_9:112931637-112931742:+|nuORF	79.71258880314673	0.07236858429579222	6				NaN	NaN	0	NaN	1854	2471	4320
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4345	16.007	NaN	8017.8	30	0	2209.9	0.214				-1	 	0	58	408.56613886978494	1222.6765872095548	3	408.5664367675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1869	2474	4344
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4346	16.011	NaN	4121.8	30	0	989.92	0.106				-1	WMSMREVEEK	10	41	670.8025595285036	1339.590566123807	2	670.8004760742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_WM(Oxidation (M))SMREVEEK_	ENST00000402141.1_1_6:143757385-143757844:+|nuORF	28.081489160057373	0.6505064946289502	6				NaN	NaN	0	NaN	1870	2474	4344
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4347	16.013	NaN	9848.5	30	0	1073.5	0.106	+			36092	SEKEQRQAL	9	70	544.7893069226807	NaN	0	544.788818359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEKEQRQAL_	ENSG00000176783|ENST00000319449|RUFY1;ENST00000393448.6_1_5:179018652-179028988:+|nuORF;ENST00000502531.1_1_5:179023563-179032937:+|nuORF;nc|ENSG00000176783|Q96T51-2|RUFY1	117.81106730687013	0.0026430897281881707	6				NaN	NaN	0	NaN	1871	2474	4344
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4348	16.015	NaN	31739	30	0	12961	0.106	+			20472	KEVWTRLK	8	85	530.3174697292823	1058.6203865253644	2	530.3180541992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEVWTRLK_	ENSG00000198721|ENST00000380118|ECI2;ENST00000380120.6_1_6:4116110-4130812:-|nuORF;ENST00000464057.5_1_6:4116110-4125894:-|nuORF;ENST00000496241.6_1_6:4116110-4130478:-|nuORF;nc|ENSG00000198721|O75521-2|ECI2	49.44154591367651	0.597725784090933	6				NaN	NaN	0	NaN	1872	2474	4344
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4349	16.016	NaN	2138.2	30	0	240.61	0.106	+			10158	ESTDLDMLI	9	51	518.7459722242619	NaN	0	518.7459106445312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ESTDLDMLI_	ENSG00000070081|ENST00000529010|NUCB2;nc|ENSG00000070081|P80303-2|NUCB2;NUCB2|p.K251Qfs*4|1|0.28|ENSG00000070081|chr11:17311267-17311268|-/T|frameshift_variant;NUCB2|p.K400Nfs*15|2|0.29|ENSG00000070081|chr11:17330921-17330921|A/-|frameshift_variant	33.51558372728122	0.30835390848773375	6				NaN	NaN	0	NaN	1873	2474	4344
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4350	16.018	NaN	5994.5	30	0	912.77	0.034			+	6299	AVSTGQLVSG	10	68	459.7473558814492	917.4801588296984	2	459.74786376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AVSTGQLVSG_	REV__ENSG00000105852|ENST00000265627|PON3;REV__ENST00000442770.5_1_7:94989287-95024046:-|nuORF	51.19269402634007	0.44601001148513897	6				NaN	NaN	0	NaN	1874	2474	4344
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4351	16.019	NaN	8216.7	30	0	1396.3	0.142	+			45121	TVKDFSHAK	9	67	344.85330775945044	1031.5380938785513	3	344.853759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TVKDFSHAK_	ENSG00000164941|ENST00000523731|INTS8;ENST00000523206.5_1_8:95850795-95884149:+|nuORF;ENST00000523321.5_1_8:95835614-95871872:+|nuORF;nc|ENSG00000164941|Q75QN2-2|INTS8	71.87747018426188	0.13267044672804276	6				NaN	NaN	0	NaN	1875	2474	4344
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4369	16.057	NaN	19296	30	0	11950	0.214			+	48074	VSSSDIGRAK	10	36	340.5203187234464	1018.5391267705393	3	340.5209045410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSSSDIGRAK_	REV__ENSG00000166483|ENST00000450114|WEE1;REV__ENST00000524549.1_1_11:9597437-9598815:+|nuORF	27.882242232435846	0.6521336255503853	6				NaN	NaN	0	NaN	1890	2477	4368
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4370	16.06	NaN	5761.6	30	0	1100.8	0.106	+			16062	HAYEHSLGK	9	70	521.2592375564566	1040.503922179713	2	521.2601318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HAYEHSLGK_	ENSG00000105355|ENST00000221957|PLIN3;nc|ENSG00000105355|O60664-2|PLIN3;nc|ENSG00000105355|O60664-3|PLIN3;nc|ENSG00000105355|O60664-4|PLIN3	136.26810882979174	0.012230845423532208	6				NaN	NaN	0	NaN	1891	2477	4368
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4371	16.062	NaN	4471	30	0	982.05	0.106			+	9881	EQKDKKRK	8	64	353.8800063362643	1058.618189608993	3	353.8805847167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EQKDKKRK_	REV__ENSG00000074356|ENST00000389005|NCBP3;REV__ENST00000575815.5_1_17:3728158-3732552:-|nuORF	44.116797842482775	0.6307669463330267	6				NaN	NaN	0	NaN	1892	2477	4368
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4372	16.064	NaN	14432	30	0	7184.2	0.106	+			31362	QKCPLAWQSK	10	66	415.8855571252196	1244.6348419758588	3	415.88604736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_QKC(Carbamidomethyl (C))PLAWQSK_	ENSG00000187240|ENST00000375735|DYNC2H1;nc|ENSG00000187240|Q8NCM8-2|DYNC2H1	41.42661286455405	0.5359995577334734	6				NaN	NaN	0	NaN	1893	2477	4368
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4373	16.066	NaN	7090.1	30	0	1306.4	0.106			+	15785	GVTTATRQ	8	60	417.2274645107721	NaN	0	417.2274475097656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GVTTATRQ_	REV__ENST00000573058.1_1_17:79225874-79226105:-|nuORF	55.50420428727701	1.7418937515398478	6				NaN	NaN	0	NaN	1894	2477	4368
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4374	16.068	NaN	2321.8	30	0	321.25	0.036	+			990	AEKKEMKTI	9	68	539.3015491990864	1076.5885454649726	2	539.3030395507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEKKEMKTI_	ENSG00000163466|ENST00000315717|ARPC2;ENST00000487321.1_1_2:219114510-219118635:+|nuORF	46.45678178249821	0.34452392205506005	6				NaN	NaN	0	NaN	1895	2477	4368
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4375	16.068	NaN	27772	30	0	2388.7	0.143				-1	KMRQMWNNK	9	97	626.3075441309633	1250.6005353287264	2	626.3081665039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_KMRQM(Oxidation (M))WNNK_	ADAMTSL3|p.F1172Yfs*20|1|0.12|ENSG00000156218|chr15:83983142-83983143|-/A|frameshift_variant;ADAMTSL3|p.H1300Ifs*18|1|0.33|ENSG00000156218|chr15:83991138-83991138|C/-|frameshift_variant;ADAMTSL3|p.N1166Kfs*26|1|0.4|ENSG00000156218|chr15:83983119-83983120|-/A|frameshift_variant;ADAMTSL3|p.R1207Gfs*32|1|0.3|ENSG00000156218|chr15:83983243-83983243|A/-|frameshift_variant;ENSG00000156218|ENST00000286744|ADAMTSL3;ENST00000561483.5_1_15:84323016-84694242:+|nuORF;nc|ENSG00000156218|P82987-2|ADAMTSL3	106.41520541750704	0.03265588207292361	6				NaN	NaN	0	NaN	1896	2477	4368
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4393	16.108	NaN	13235	30	0	2590.7	0.214			+	38228	SQLDQQAAEH	10	81	563.7592316253626	1125.5039103175252	2	563.7600708007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SQLDQQAAEH_	REV__ENSG00000126777|ENST00000395314|KTN1;REV__KTN1|p.A1102Gfs*15|2|0.3|ENSG00000126777|chr14:55670756-55670757|-/A|frameshift_variant;REV__KTN1|p.H994Sfs*2|1|0.35|ENSG00000126777|chr14:55659677-55659678|-/C|frameshift_variant;REV__KTN1|p.K1078Nfs*12|1|0.3|ENSG00000126777|chr14:55667292-55667292|A/-|frameshift_variant;REV__KTN1|p.K1101Rfs*18|1|0.4|ENSG00000126777|chr14:55670757-55670757|A/-|frameshift_variant;REV__KTN1|p.P993Lfs*6|1|0.36|ENSG00000126777|chr14:55659678-55659678|C/-|frameshift_variant;REV__nc|ENSG00000126777|Q86UP2-2|KTN1;REV__nc|ENSG00000126777|Q86UP2-3|KTN1;REV__nc|ENSG00000126777|Q86UP2-4|KTN1	35.15202426646627	0.5927656479315102	6				NaN	NaN	0	NaN	1911	2480	4392
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4394	16.111	NaN	7227.2	30	0	1216.4	0.106	+			16956	HPPPVSKSEI	10	53	364.20077723485184	1089.5805023047556	3	364.2012023925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HPPPVSKSEI_	DTX4|p.K396Nfs*34|2|0.25|ENSG00000110042|chr11:59191136-59191136|A/-|frameshift_variant;ENSG00000110042|ENST00000227451|DTX4;nc|ENSG00000110042|Q9Y2E6-2|DTX4	31.954861631926434	0.6188749698950511	6				NaN	NaN	0	NaN	1912	2480	4392
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4395	16.113	NaN	7068.2	30	0	1256.9	0.106			+	3810	ATAGLLQQ	8	61	401.22655993125557	800.4385669293112	2	401.2266845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATAGLLQQ_	REV__ATP8B3|p.T1172Rfs*12|1|0.27|ENSG00000130270|chr19:1785178-1785178|G/-|frameshift_variant;REV__ENSG00000130270|ENST00000310127|ATP8B3	74.25504064058377	0.37144338840759816	6				NaN	NaN	0	NaN	1913	2480	4392
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4396	16.115	NaN	5008.8	30	0	938.43	0.106			+	12971	GETKAVETR	9	68	495.7631042943675	989.511655655535	2	495.76385498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GETKAVETR_	REV__tr|U7SUH5|U7SUH5_FUSNUUvrABCsystemproteinAOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01159PE=3SV=1	76.7741389293348	0.11149722112137898	6				NaN	NaN	0	NaN	1914	2480	4392
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4397	16.117	NaN	71801	30	0	12468	0.106				-1	 	0	94	438.9411544140981	1313.8016338424943	3	438.94146728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1915	2480	4392
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4398	16.119	NaN	11148	30	0	3256.9	0.037			+	26538	LTREELLKK	9	62	377.23586803818205	1128.6857747147462	3	377.236083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LTREELLKK_	REV__ENSG00000134318|ENST00000315872|ROCK2;REV__ROCK2|p.K1351Sfs*17|1|0.34|ENSG00000134318|chr2:11192259-11192259|T/-|frameshift_variant	41.42661286455405	0.403525789677298	6				NaN	NaN	0	NaN	1916	2480	4392
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4399	16.119	NaN	3367	30	0	365.8	0.139			+	31668	QNGSWIRI	8	62	487.2642889206188	972.5140249080376	2	487.2643127441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QNGSWIRI_	REV__nc|ENSG802|Q902F9|HERVK_113_env;REV__nc|ENSG811|Q9UKH3|ERVK-9_env;REV__nc|ENSG815|Q902F8|ERVK-8_env;REV__nc|ENSG819|P61567|ERVK-7_env;REV__nc|ENSG821|P63135|ERVK-7_pol;REV__nc|ENSG825|Q69384|ERVK-6_env;REV__nc|ENSG833|P61570|ERVK-25_env;REV__nc|ENSG836|P61566|ERVK-24_env;REV__nc|ENSG840|P61565|ERVK-21_env;REV__nc|ENSG845|O71037|ERVK-19_env;REV__nc|ENSG849|O42043|ERVK-18_env	32.81241826257853	0.7059802730411993	6				NaN	NaN	0	NaN	1917	2480	4392
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4417	16.159	NaN	38690	30	0	5905	0.214	+			34192	RTCWETTKK	9	125	403.87257339505345	1208.5958907853603	3	403.87286376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_RTC(Carbamidomethyl (C))WETTKK_	ENST00000504956.5_1_4:87869676-87967907:+|nuORF;ENST00000511442.1_2_4:87869713-87967910:+|nuORF	141.91077491472637	0.009583644583980236	6				NaN	NaN	0	NaN	1932	2483	4416
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4418	16.163	NaN	12389	30	0	1783.5	0.106	+			34193	RTCWETTKK	9	77	605.3047892971102	1208.5950256610204	2	605.3057861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_RTC(Carbamidomethyl (C))WETTKK_	ENST00000504956.5_1_4:87869676-87967907:+|nuORF;ENST00000511442.1_2_4:87869713-87967910:+|nuORF	112.10723106719422	0.02684780151337622	6				NaN	NaN	0	NaN	1933	2483	4416
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4419	16.165	NaN	2069.4	30	0	659.4	0.106			+	-1	KENEMLVKK	9	58	567.8121849494169	1133.6098169656336	2	567.8131713867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_KENEM(Oxidation (M))LVKK_	REV__ENSG00000136807|ENST00000373264|CDK9;REV__nc|ENSG00000136807|P50750-2|CDK9	69.6276240434122	0.14239879520340665	6				NaN	NaN	0	NaN	1934	2483	4416
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4420	16.166	NaN	3432.5	30	0	1184.2	0.106	+			31010	QESQTTRSV	9	61	518.2556534640594	1034.4967539949187	2	518.2571411132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QESQTTRSV_	ENSG00000145113|ENST00000463781|MUC4;MUC4|p.L3985Ffs*274|1|0.3|ENSG00000145113|chr3:195779627-195779627|G/-|frameshift_variant;MUC4|p.N4902Tfs*8|1|0.37|ENSG00000145113|chr3:195761027-195761027|T/-|frameshift_variant;nc|ENSG00000145113|Q99102-10|MUC4;nc|ENSG00000145113|Q99102-11|MUC4;nc|ENSG00000145113|Q99102-15|MUC4;nc|ENSG00000145113|Q99102-16|MUC4;nc|ENSG00000145113|Q99102-17|MUC4;nc|ENSG00000145113|Q99102-2|MUC4;nc|ENSG00000145113|Q99102-3|MUC4;nc|ENSG00000145113|Q99102-5|MUC4;nc|ENSG00000145113|Q99102-7|MUC4;nc|ENSG00000145113|Q99102-8|MUC4;nc|ENSG00000145113|Q99102-9|MUC4	47.95952297671804	0.32689736945648856	6				NaN	NaN	0	NaN	1935	2483	4416
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4421	16.168	NaN	12087	30	0	2601.5	0.106	+			29205	NVNEPATTK	9	73	487.25053382619103	972.4865147191821	2	487.2508239746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NVNEPATTK_	ENSG00000116906|ENST00000366647|GNPAT;nc|ENSG00000116906|O15228-2|GNPAT	96.0336014099291	0.047854655524928534	6				NaN	NaN	0	NaN	1936	2483	4416
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4422	16.17	NaN	6008.9	30	0	559.11	0.035			+	31905	QQIGTAQKK	9	67	501.29013515831207	1000.5657173834242	2	501.29046630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QQIGTAQKK_	REV__ENSG00000117523|ENST00000647382|PRRC2C;REV__nc|ENSG00000117523|Q9Y520-2|PRRC2C;REV__nc|ENSG00000117523|Q9Y520-3|PRRC2C;REV__nc|ENSG00000117523|Q9Y520-4|PRRC2C;REV__nc|ENSG00000117523|Q9Y520-5|PRRC2C;REV__nc|ENSG00000117523|Q9Y520-6|PRRC2C;REV__nc|ENSG00000117523|Q9Y520|PRRC2C;REV__PRRC2C|p.P2791Lfs*5|1|0.1|ENSG00000117523|chr1:171591761-171591761|C/-|frameshift_variant	90.60085204095205	0.06317133949006545	6				NaN	NaN	0	NaN	1937	2483	4416
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4423	16.171	NaN	6075.2	30	0	986.09	0.138				-1	 	0	55	428.21892812560725	854.4233033180145	2	428.2193298339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1938	2483	4416
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4441	16.21	NaN	23144	30	0	5465	0.214	+			22402	KTISQAVNK	9	89	494.7926169288547	987.5706809245095	2	494.7931213378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTISQAVNK_	ENSG00000061676|ENST00000361354|NCKAP1;ENST00000495619.1_1_2:183822183-183829436:-|nuORF;nc|ENSG00000061676|Q9Y2A7-2|NCKAP1;NCKAP1|p.M725Kfs*19|1|0.04|ENSG00000061676|chr2:182953311-182953312|-/AGAGTATT|frameshift_variant	185.32735939749918	0.0007612398116818154	6				NaN	NaN	0	NaN	1953	2486	4440
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4442	16.214	NaN	16144	30	0	3166	0.106	+			34592	RVMKALVNR	9	76	368.2218085853606	1101.6435963562817	3	368.22210693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_RVM(Oxidation (M))KALVNR_	ENSG00000149136|ENST00000278412|SSRP1;ENST00000293880.9_1_11:57098199-57100416:-|nuORF	46.45678178249821	0.34452392205506005	6				NaN	NaN	0	NaN	1954	2486	4440
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4443	16.216	NaN	21076	30	0	2595.9	0.106	+			12681	GEKDTAKSL	9	87	474.7529119352994	947.4912709373988	2	474.7534484863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEKDTAKSL_	ENSG00000013364|ENST00000357402|MVP	94.4091291819064	0.0524345700464502	6				NaN	NaN	0	NaN	1955	2486	4440
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4444	16.217	NaN	6268.3	30	0	3050.5	0.106			+	32707	RAKKRIEMA	9	72	551.8289371558024	1101.6433213784046	2	551.8299560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RAKKRIEMA_	REV__ENSG00000067704|ENST00000366922|IARS2;REV__IARS2|p.F187S|1|0.38|ENSG00000067704|chr1:220102138-220102138|T/C|missense_variant;REV__IARS2|p.Y609Sfs*33|1|0.05|ENSG00000067704|chr1:220126831-220126832|-/CAGAAAATGAA|frameshift_variant	51.19269402634007	0.2889735674168909	6				NaN	NaN	0	NaN	1956	2486	4440
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4445	16.219	NaN	17566	30	0	5006.3	0.106			+	4934	ATQPGQPPSAG	11	75	505.74814363590315	1009.4817343386063	2	505.7489318847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATQPGQPPSAG_	REV__ENST00000467438.1_1_1:87597663-87598596:+|nuORF	98.58198989935565	0.06364242648159563	6				NaN	NaN	0	NaN	1957	2486	4440
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4446	16.221	NaN	12687	30	0	2302.2	0.034	+			18002	IIAKVTAKK	9	75	486.3338774392492	970.6532019452984	2	486.3343200683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IIAKVTAKK_	ENSG00000155008|ENST00000373173|APOOL	93.1432384553994	0.056003526918089595	6				NaN	NaN	0	NaN	1958	2486	4440
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4447	16.222	NaN	5823.8	30	0	1179.3	0.139	+			1687	AGTHTNIPK	9	60	469.7560556156704	937.4975582981408	2	469.7563171386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AGTHTNIPK_	ENSG00000015413|ENST00000690203|DPEP1;ENST00000564281.5_1_16:89680092-89704100:+|nuORF;ENST00000565249.5_1_16:89680092-89703400:+|nuORF	77.31757898189308	0.1091473830098891	6				NaN	NaN	0	NaN	1959	2486	4440
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4465	16.261	NaN	168550	30	0	61801	0.147				-1	 	0	62	418.22899942932804	834.4434459254561	2	418.2294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1974	2489	4464
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4466	16.264	NaN	53175	30	0	17649	0.106	+			48877	VVDAKTLKK	9	74	334.5499485982622	NaN	0	334.5499267578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVDAKTLKK_	ENSG00000079246|ENST00000392132|XRCC5;ENST00000493706.1_1_2:216990646-216992426:+|nuORF;XRCC5|p.E287Kfs*11|2|0.25|ENSG00000079246|chr2:216127589-216127589|A/-|frameshift_variant;XRCC5|p.Q488Rfs*29|1|0.06|ENSG00000079246|chr2:216141305-216141305|C/-|frameshift_variant	56.72105179125745	0.16330365735109603	6				NaN	NaN	0	NaN	1975	2489	4464
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4467	16.266	NaN	10894	30	0	4319.5	0.106	+			15103	GTQKQQGLMK	10	66	559.8021985427305	1117.5898441522609	2	559.8033447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTQKQQGLMK_	ENSG00000134398|ENST00000256797|ERN2;ERN2|p.L515Wfs*48|1|0.41|ENSG00000134398|chr16:23700665-23700665|G/-|frameshift_variant;ERN2|p.Q822Rfs*35|1|0.26|ENSG00000134398|chr16:23692019-23692019|G/-|frameshift_variant	114.8945686534367	0.03454040281423369	6				NaN	NaN	0	NaN	1976	2489	4464
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4468	16.267	NaN	31984	30	0	7326.7	0.106	+			22954	KVQSKVNLK	9	83	522.3315896375582	1042.6486263419163	2	522.3326416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KVQSKVNLK_	DYNC1H1|p.F2635Lfs*67|1|0.16|ENSG00000197102|chr14:102017141-102017141|T/-|frameshift_variant;DYNC1H1|p.G1902Vfs*27|2|0.27|ENSG00000197102|chr14:102006154-102006154|G/-|frameshift_variant;DYNC1H1|p.K3112Hfs*3|1|0.31|ENSG00000197102|chr14:102027998-102027999|-/TCACAAG|frameshift_variant;DYNC1H1|p.W4201Gfs*43|1|0.42|ENSG00000197102|chr14:102043958-102043958|G/-|frameshift_variant;ENSG00000197102|ENST00000360184|DYNC1H1	155.5846463517096	0.005567437401040498	6				NaN	NaN	0	NaN	1977	2489	4464
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4469	16.269	NaN	6776.5	30	0	732.41	0.106	+			35333	SANTNTVPK	9	66	466.2457086095173	930.4768642858346	2	466.2456359863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SANTNTVPK_	ENSG00000165417|ENST00000553612|GTF2A1	72.2432373244024	0.13108886737667413	6				NaN	NaN	0	NaN	1978	2489	4464
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4470	16.271	NaN	3613.5	30	0	1044.8	0.106			+	32979	REEARLQRE	9	42	396.21424296509986	1185.6208994954995	3	396.2144470214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_REEARLQRE_	REV__ENSG00000159450|ENST00000614923|TCHH	28.081489160057373	0.5408112046645406	6				NaN	NaN	0	NaN	1979	2489	4464
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4471	16.273	NaN	2389.9	30	0	261.86	0.032	+			616	ADTPKASK	8	59	409.22418212890625	NaN	0	409.22418212890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ADTPKASK_	ENSG00000225968|ENST00000424383|ELFN1	52.936696900407355	1.7418937515398478	6				NaN	NaN	0	NaN	1980	2489	4464
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4489	16.31	NaN	151040	30	0	24863	0.215	+			44990	TVDEKNYTK	9	113	549.2761369801503	1096.5377210271006	2	549.277587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVDEKNYTK_	ENSG00000182551|ENST00000327435|ADI1;nc|ENSG00000182551|Q9BV57-2|ADI1	182.3913890336628	0.0010559746847940753	6				NaN	NaN	0	NaN	1995	2492	4488
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4490	16.313	NaN	12183	30	0	1017.9	0.106				-1	 	0	69	472.7609249074446	943.5072968816892	2	472.76129150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1996	2492	4488
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4491	16.315	NaN	94288	30	0	30568	0.106				-1	 	0	102	366.52015708233023	1096.5386418471908	3	366.5205993652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1997	2492	4488
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4492	16.317	NaN	47910	30	0	16693	0.106			+	-1	MKCLSLEYIG	10	70	391.5277083781567	1171.5612957346702	3	391.52789306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_M(Oxidation (M))KCLSLEYIG_	REV__ENSG00000054523|ENST00000676179|KIF1B;REV__nc|ENSG00000054523|O60333-2|KIF1B;REV__nc|ENSG00000054523|O60333-4|KIF1B	27.047317107675042	0.6589519614906109	6				NaN	NaN	0	NaN	1998	2492	4488
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4493	16.319	NaN	10539	30	0	1477.4	0.106	+			20799	KIAKQIVQK	9	79	528.3499535445653	1054.6853541559306	2	528.3507690429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KIAKQIVQK_	ENSG00000184787|ENST00000345496|UBE2G2;ENST00000477954.5_1_21:46191294-46194726:-|nuORF;ENST00000481546.1_1_21:46191294-46193735:-|nuORF;ENST00000491513.5_1_21:46191294-46199096:-|nuORF;ENST00000497630.5_1_21:46191294-46221727:-|nuORF;nc|ENSG00000184787|P60604-2|UBE2G2	191.6257511998002	0.00012895968667509943	6				NaN	NaN	0	NaN	1999	2492	4488
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4494	16.321	NaN	12951	30	0	1500	0.037	+			34562	RVLESVQKK	9	81	362.8920041350084	1085.6541830052251	3	362.8924865722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RVLESVQKK_	ENSG00000127511|ENST00000248054|SIN3B;nc|ENSG00000127511|O75182|SIN3B;SIN3B|p.F776Lfs*21|1|0.31|ENSG00000127511|chr19:16869880-16869880|T/-|frameshift_variant;SIN3B|p.P742Qfs*55|1|0.37|ENSG00000127511|chr19:16869777-16869777|C/-|frameshift_variant	176.08678752253132	0.0017279326439731339	6				NaN	NaN	0	NaN	2000	2492	4488
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4495	16.321	NaN	13814	30	0	5381.7	0.142	+			39634	STIDPSGTRSK	11	52	383.5345602042471	1147.5818512129413	3	383.534912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STIDPSGTRSK_	ENSG00000121931|ENST00000369763|LRIF1	37.50817390946774	0.5920388381045607	6				NaN	NaN	0	NaN	2001	2492	4488
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4514	16.361	NaN	124030	30	0	37986	0.193	+			6461	AVYGQKEIHRK	11	96	443.585721422447	NaN	0	443.5856628417969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVYGQKEIHRK_	ENSG00000145907|ENST00000356245|G3BP1;ENST00000413279.1_1_2:136269117-136269381:-|nuORF;ENST00000519832.1_1_5:151166169-151170647:+|nuORF;nc|ENSG00000145907|Q13283-2|G3BP1	47.95952297671804	0.32997419910078585	6				NaN	NaN	0	NaN	2017	2495	4513
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4515	16.364	NaN	65230	30	0	31302	0.106				-1	 	0	61	360.52026709300765	1078.538971879223	3	360.52069091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2018	2495	4513
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4516	16.366	NaN	21856	30	0	2437.9	0.106	+			42971	TEKEGKDQEL	10	84	588.7899375831975	1175.5653222331948	2	588.7910766601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TEKEGKDQEL_	ENSG00000137497|ENST00000393695|NUMA1;nc|ENSG00000137497|Q14980-2|NUMA1;nc|ENSG00000137497|Q14980-3|NUMA1;nc|ENSG00000137497|Q14980-4|NUMA1;NUMA1|p.A1067S|1|0.25|ENSG00000137497|chr11:72014304-72014304|C/A|missense_variant;NUMA1|p.K1766Rfs*2|1|0.39|ENSG00000137497|chr11:72007357-72007357|G/-|frameshift_variant;NUMA1|p.L1786Pfs*18|1|0.23|ENSG00000137497|chr11:72007295-72007296|-/G|frameshift_variant	178.54760496737404	0.0013825827145267076	6				NaN	NaN	0	NaN	2019	2495	4513
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4517	16.368	NaN	9904.5	30	0	1582.7	0.106				-1	 	0	62	455.22416744874505	908.4337819642901	2	455.2245788574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2020	2495	4513
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4518	16.37	NaN	12770	30	0	1500.9	0.106	+			18392	IRKSDINQ	8	76	487.2745959329322	NaN	0	487.27471923828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IRKSDINQ_	tr|U7SMC2|U7SMC2_FUSNUN-acetyl-D-galactosaminetransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01949PE=3SV=1	66.42927471994793	1.7418937515398478	6				NaN	NaN	0	NaN	2021	2495	4513
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4519	16.372	NaN	3769.8	30	0	1418.1	0.106				-1	 	0	49	407.2376685206015	812.460784108003	2	407.2379455566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2022	2495	4513
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4520	16.373	NaN	7227.7	30	0	2267.4	0.038	+			12878	GERGTKIKDLS	11	52	401.89467287026247	1202.6621892109874	3	401.8949279785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GERGTKIKDLS_	ENST00000407371.1_1_6:90131981-90132104:-|nuORF	18.262085536374414	0.7849791996189919	6				NaN	NaN	0	NaN	2023	2495	4513
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4538	16.411	NaN	18631	30	0	2161.1	0.214	+			360	AAQKNMALK	9	78	487.77539177804545	973.5362306228909	2	487.77593994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAQKNMALK_	ENSG00000100345|ENST00000216181|MYH9;SYNDIG1-MYH9|1|fusion	122.1759843771914	0.019882474861609503	6				NaN	NaN	0	NaN	2038	2498	4537
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4539	16.415	NaN	90598	30	0	23060	0.106	+			5262	ATVDKTVCK	9	103	482.7594047052612	963.5042564773224	2	482.7599182128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATVDKTVCK_	ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1670Tfs*23|1|0.29|ENSG00000174231|chr17:1659487-1659487|C/-|frameshift_variant	164.45504665044191	0.003713414289755139	6				NaN	NaN	0	NaN	2039	2498	4537
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4540	16.417	NaN	8641.4	30	0	843.59	0.106	+			34422	RTTHNIIEK	9	74	556.3139727754126	1110.613392617625	2	556.3150024414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RTTHNIIEK_	ENSG00000198911|ENST00000361204|SREBF2;nc|ENSG00000198911|Q12772-2|SREBF2	66.9202029811203	0.15592758990009112	6				NaN	NaN	0	NaN	2040	2498	4537
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4541	16.419	NaN	14019	30	0	2490.1	0.106	+			12066	GAAGPVCSK	9	63	395.1994177050628	788.3842824769256	2	395.1997375488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GAAGPVCSK_	ENST00000395863.7_1_20:55841273-55841597:-|nuORF	87.69643885390035	0.07135982304947239	6				NaN	NaN	0	NaN	2041	2498	4537
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4542	16.42	NaN	4418.3	30	0	592.56	0.106	+			32035	QRQSLFGAQ	9	74	517.7719546591875	1033.5293563851749	2	517.7728881835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QRQSLFGAQ_	ENSG00000120068|ENST00000239144|HOXB8	75.04331003522576	0.118981335847003	6				NaN	NaN	0	NaN	2042	2498	4537
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4543	16.422	NaN	3559.8	30	0	543.09	0.038	+			10064	ESHCGLATFVI	11	53	392.8622409390299	1175.5648934172898	3	392.86279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ESHCGLATFVI_	TSPAN3|p.R80H|1|0.46|ENSG00000140391|chr15:77056080-77056080|C/T|missense_variant	40.05817265558897	0.5571470695993369	6				NaN	NaN	0	NaN	2043	2498	4537
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4544	16.423	NaN	2748.7	30	0	840.63	0.14	+			14133	GSLSPDAHLP	10	35	331.83865693573546	992.4941414074065	3	331.8392333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GSLSPDAHLP_	ENSG00000136367|ENST00000419474|ZFHX2;nc|ENSG00000136367|Q9C0A1-2|ZFHX2	29.14955571784316	0.6417842315402807	6				NaN	NaN	0	NaN	2044	2498	4537
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4562	16.461	NaN	5101.4	30	0	521.33	0.214			+	10291	ETNSGVRVM	9	69	496.74462673046867	991.4747005277374	2	496.7450866699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ETNSGVRVM_	REV__RIMBP3|p.K953N|1|0.04|ENSG00000275793|chr22:18608576-18608576|C/A|missense_variant	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	2059	2501	4561
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4563	16.465	NaN	9336	30	0	5029	0.106			+	22762	KVESKQVSI	9	71	509.2999069253692	1016.5852609175384	2	509.3006591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVESKQVSI_	REV__DNAH14|p.I2559Nfs*2|1|0.39|ENSG00000185842|chr1:225337448-225337449|-/A|frameshift_variant;REV__DNAH14|p.T2021Hfs*9|1|0.38|ENSG00000185842|chr1:225289906-225289906|A/-|frameshift_variant;REV__DNAH14|p.V536Yfs*11|1|0.03|ENSG00000185842|chr1:225042893-225042894|-/ATAC|frameshift_variant;REV__ENSG00000185842|ENST00000682510|DNAH14;REV__nc|ENSG00000185842|Q0VDD8-4|DNAH14;REV__nc|ENSG00000185842|Q0VDD8|DNAH14	60.11826168202944	0.21262886028301267	6				NaN	NaN	0	NaN	2060	2501	4561
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4564	16.467	NaN	15791	30	0	4279.1	0.106				-1	SKGLENSMCC	10	74	376.82036948866516	1127.4392790661955	3	376.8209228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SKGLENSMC(Carbamidomethyl (C))C_	ENSG00000158352|ENST00000376020|SHROOM4;nc|ENSG00000158352|Q9ULL8-2|SHROOM4;SHROOM4|p.G1268Rfs*28|1|0.77|ENSG00000158352|chrX:50602774-50602775|-/G|frameshift_variant	28.5767321226876	0.6464621404813697	6				NaN	NaN	0	NaN	2061	2501	4561
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4565	16.468	NaN	5422.2	30	0	646.51	0.106	+			16478	HETKGSVAV	9	70	464.2477513332637	926.4809497333274	2	464.2481689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HETKGSVAV_	ENSG00000122965|ENST00000261741|RBM19;RBM19|p.F841Sfs*18|1|0.28|ENSG00000122965|chr12:113915007-113915007|G/-|frameshift_variant	79.71258880314673	0.09879134589249085	6				NaN	NaN	0	NaN	2062	2501	4561
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4566	16.47	NaN	13813	30	0	7633.5	0.106			+	13052	GEYEFFLLPWT	11	65	467.8960873256327	1400.6664325770982	3	467.896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GEYEFFLLPWT_	REV__ENSG00000084734|ENST00000264717|GCKR;REV__nc|ENSG00000084734|Q14397|GCKR	14.137123925751023	0.8042936413770803	6				NaN	NaN	0	NaN	2063	2501	4561
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4567	16.472	NaN	6377.1	30	0	2260.3	0.036			+	-1	GLLWKWCG	8	51	340.5095017171868	1018.5066757517604	3	340.5101013183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_GLLWKWC(Carbamidomethyl (C))G_	REV__ENST00000474787.1_1_9:139974763-139976621:+|nuORF	19.359975847455235	0.7988239741663654	6				NaN	NaN	0	NaN	2064	2501	4561
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4584	16.508	NaN	20450	30	0	2058.6	0.214	+			2721	AQTGTRWNK	9	81	531.2772764825118	1060.5400000318234	2	531.2781372070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AQTGTRWNK_	ENSG00000198258|ENST00000586895|UBL5;ENST00000588141.1_1_19:9939136-9939570:+|nuORF;ENST00000588595.5_1_19:9939136-9939352:+|nuORF;ENST00000589372.1_1_19:9939013-9939570:+|nuORF	98.58198989935565	0.04066992115528678	6				NaN	NaN	0	NaN	2078	2504	4583
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4585	16.512	NaN	23282	30	0	2318.2	0.106			+	47593	VRQIRGPQK	9	111	361.2248315173713	1080.6526651523138	3	361.2252502441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VRQIRGPQK_	REV__ENSG00000100883|ENST00000216774|SRP54;REV__nc|ENSG00000100883|P61011-2|SRP54	47.657333605630114	0.33044192980041115	6				NaN	NaN	0	NaN	2079	2504	4583
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4586	16.514	NaN	15591	30	0	2160.1	0.106	+			44388	TSLIPMTYK	9	78	527.2868887328998	1052.5592245325995	2	527.2877807617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TSLIPMTYK_	ENSG00000157423|ENST00000393567|HYDIN;HYDIN|p.E2653Kfs*4|1|0.27|ENSG00000157423|chr16:70918259-70918259|T/-|frameshift_variant;HYDIN|p.F4256Vfs*111|1|0.27|ENSG00000157423|chr16:70849833-70849834|-/C|frameshift_variant;HYDIN|p.I1986Nfs*6|1|0.45|ENSG00000157423|chr16:70961970-70961971|-/T|frameshift_variant;HYDIN|p.R1703Lfs*51|1|0.5|ENSG00000157423|chr16:70973950-70973951|-/GA|frameshift_variant;HYDIN|p.V3416Gfs*64|1|0.15|ENSG00000157423|chr16:70879725-70879726|-/ACTCC|frameshift_variant;nc|ENSG00000157423|Q4G0P3-10|HYDIN;nc|ENSG00000157423|Q4G0P3-5|HYDIN;nc|ENSG00000157423|Q4G0P3-6|HYDIN;nc|ENSG00000157423|Q4G0P3-8|HYDIN	58.78195531508484	0.22376836668196862	6				NaN	NaN	0	NaN	2080	2504	4583
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4587	16.516	NaN	7673.1	30	0	862.53	0.106			+	-1	ISLLCSLAVV	10	57	358.87990135640314	1073.6178746694095	3	358.8802490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_ISLLC(Carbamidomethyl (C))SLAVV_	REV__ATP8B3|p.T1172Rfs*12|1|0.27|ENSG00000130270|chr19:1785178-1785178|G/-|frameshift_variant;REV__ENSG00000130270|ENST00000310127|ATP8B3;REV__nc|ENSG00000130270|O60423-1|ATP8B3;REV__nc|ENSG00000130270|O60423-3|ATP8B3	36.446750945000026	0.5818864909973037	6				NaN	NaN	0	NaN	2081	2504	4583
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4588	16.517	NaN	9345	30	0	1125.8	0.106	+			36135	SEKRKQISV	9	81	537.816268311509	1073.617983689818	2	537.8172607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SEKRKQISV_	ENSG00000100994|ENST00000216962|PYGB;PYGB-C20orf152|1|fusion;PYGB-C20orf152|2|fusion;PYGB|p.T677Kfs*4|1|0.44|ENSG00000100994|chr20:25292466-25292466|C/-|frameshift_variant	55.08391021199286	0.2545954270840753	6				NaN	NaN	0	NaN	2082	2504	4583
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4589	16.519	NaN	10127	30	0	1019.9	0.037				-1	 	0	79	366.54818957604203	1096.6227393283261	3	366.5485534667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2083	2504	4583
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4590	16.52	NaN	9162.9	30	0	930.23	0.141				-1	 	0	78	549.3184881773396	1096.6224234214792	2	549.3195190429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2084	2504	4583
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4608	16.559	NaN	97178	30	0	69700	0.214			+	300	AAPGKERSL	9	69	464.76327363914555	927.5119943450911	2	464.7637939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAPGKERSL_	REV__ENSG00000182674|ENST00000523207|KCNB2	65.46538089061403	0.16805504838372562	6				NaN	NaN	0	NaN	2099	2507	4607
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4609	16.562	NaN	42029	30	0	4944.2	0.106	+			35863	SEDKKRPSL	9	99	530.2929928847678	1058.5714328363356	2	530.293701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEDKKRPSL_	ENSG00000140682|ENST00000394863|TGFB1I1;ENST00000564176.5_1_16:31485144-31486093:+|nuORF;ENST00000567066.6_1_16:31483405-31488894:+|nuORF;ENST00000568142.2_1_16:31484766-31486093:+|nuORF;nc|ENSG00000140682|O43294-2|TGFB1I1	104.0567914643314	0.03506238181059741	6				NaN	NaN	0	NaN	2100	2507	4607
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4610	16.564	NaN	24668	30	0	7539.6	0.106	+			23037	KVSYSHIQSK	10	94	392.88357046179317	1175.6288819855795	3	392.8837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KVSYSHIQSK_	ENSG00000047849|ENST00000683076|MAP4;nc|ENSG00000047849|P27816-2|MAP4;nc|ENSG00000047849|P27816-4|MAP4;nc|ENSG00000047849|P27816-6|MAP4;nc|ENSG00000047849|P27816|MAP4	48.601550744091256	0.46988609897316763	6				NaN	NaN	0	NaN	2101	2507	4607
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4611	16.566	NaN	39340	30	0	14342	0.106				-1	 	0	100	367.24433277889773	1098.7111689368933	3	367.24468994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2102	2507	4607
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4612	16.568	NaN	4871.7	30	0	1458.5	0.106	+			45826	VAISVKDQRK	10	53	381.8993305678249	1142.6761623036748	3	381.899658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VAISVKDQRK_	CLMN|p.H819Mfs*29|1|0.43|ENSG00000165959|chr14:95202894-95202894|G/-|frameshift_variant;CLMN|p.K865Rfs*10|2|0.35|ENSG00000165959|chr14:95196612-95196612|T/-|frameshift_variant;ENSG00000165959|ENST00000298912|CLMN	27.047317107675042	0.6589519614906109	6				NaN	NaN	0	NaN	2103	2507	4607
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4613	16.57	NaN	3969.3	30	0	664.75	0.035	+			48642	VTSMSTQTK	9	60	491.74636693220094	981.4781809312019	2	491.7471923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTSMSTQTK_	ENSG00000083937|ENST00000263780|CHMP2B;nc|ENSG00000083937|Q9UQN3-2|CHMP2B	75.04331003522576	0.118981335847003	6				NaN	NaN	0	NaN	2104	2507	4607
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4614	16.57	NaN	5632.8	30	0	313.47	0.142	+			23038	KVSYSHIQSK	10	76	588.8214256997609	1175.6282984663217	2	588.8222045898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KVSYSHIQSK_	ENSG00000047849|ENST00000683076|MAP4;nc|ENSG00000047849|P27816-2|MAP4;nc|ENSG00000047849|P27816-4|MAP4;nc|ENSG00000047849|P27816-6|MAP4;nc|ENSG00000047849|P27816|MAP4	73.84112541714126	0.2459384371494077	6				NaN	NaN	0	NaN	2105	2507	4607
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4632	16.61	NaN	26340	30	0	5092.3	0.214	+			46335	VEKKSVAKL	9	86	334.54929913373917	1000.6260680014175	3	334.5498962402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VEKKSVAKL_	ENSG00000101182|ENST00000370873|PSMA7;ENSG00000154611|ENST00000415576|PSMA8;ENST00000484488.5_1_20:60714188-60718428:-|nuORF;nc|ENSG00000101182|O14818-4|PSMA7;nc|ENSG00000154611|Q8TAA3|PSMA8;PSMA8|p.N213Kfs*3|1|0.21|ENSG00000154611|chr18:26179084-26179085|-/A|frameshift_variant	37.81151784470057	0.4459294069877048	6				NaN	NaN	0	NaN	2120	2510	4631
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4633	16.614	NaN	27698	30	0	8966.5	0.106	+			14510	GTDEHVVCK	9	93	494.23166365960805	NaN	0	494.2315979003906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTDEHVVCK_	nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM	153.03582135801034	0.004818111814811882	6				NaN	NaN	0	NaN	2121	2510	4631
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4634	16.616	NaN	10973	30	0	1087.9	0.106	+			41881	SVTKTALNK	9	76	481.2872180356085	NaN	0	481.28717041015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVTKTALNK_	ENSG00000187164|ENST00000355371|SHTN1;nc|ENSG00000187164|A0MZ66-3|SHTN1;nc|ENSG00000187164|A0MZ66-4|SHTN1;nc|ENSG00000187164|A0MZ66-5|SHTN1;nc|ENSG00000187164|A0MZ66-6|SHTN1;nc|ENSG00000187164|A0MZ66-7|SHTN1;nc|ENSG00000187164|A0MZ66-8|SHTN1	75.04331003522576	0.0883683072398826	6				NaN	NaN	0	NaN	2122	2510	4631
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4635	16.618	NaN	7318.8	30	0	2341.7	0.106				-1	EAALCGKTEV	10	60	359.84626504229595	1076.5169657270878	3	359.8468017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_EAALC(Carbamidomethyl (C))GKTEV_	CASKIN1|p.L618Pfs*10|1|0.31|ENSG00000167971|chr16:2181520-2181521|-/C|frameshift_variant;CASKIN1|p.Q778Pfs*91|1|0.45|ENSG00000167971|chr16:2181035-2181036|-/G|frameshift_variant;CASKIN1|p.Q778Rfs*27|1|0.23|ENSG00000167971|chr16:2181036-2181036|G/-|frameshift_variant;ENSG00000167971|ENST00000343516|CASKIN1	25.125986553469783	0.6746423231557295	6				NaN	NaN	0	NaN	2123	2510	4631
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4636	16.62	NaN	29156	30	0	4716.9	0.106				-1	 	0	67	486.26080952472716	970.5070661162544	2	486.2611389160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2124	2510	4631
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4637	16.621	NaN	43301	30	0	9779.4	0.033	+			36668	SGMGSTVSK	9	77	427.2076778681105	NaN	0	427.2076721191406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SGMGSTVSK_	ENSG00000132383|ENST00000254719|RPA1;RPA1|p.N274Mfs*5|1|0.18|ENSG00000132383|chr17:1879272-1879272|A/-|frameshift_variant	131.61620852596164	0.00033844070914861534	6				NaN	NaN	0	NaN	2125	2510	4631
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4638	16.622	NaN	3222.9	30	0	443.29	0.14			+	43936	TPAQSHLSR	9	57	498.76535892077925	995.5161649083585	2	498.7646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TPAQSHLSR_	REV__ENSG00000180316|ENST00000636260|PNPLA1;REV__nc|ENSG00000180316|Q8N8W4-2|PNPLA1;REV__nc|ENSG00000180316|Q8N8W4-3|PNPLA1;REV__nc|ENSG00000180316|Q8N8W4|PNPLA1	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	2126	2510	4631
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4656	16.66	NaN	122760	30	0	38415	0.165			+	16636	HHLFLMLS	8	94	333.18134604161384	996.5222087250415	3	333.1819152832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HHLFLMLS_	REV__ENST00000498066.1_1_2:102484451-102486985:+|nuORF	46.76643321282427	0.6143254112625767	6				NaN	NaN	0	NaN	2141	2513	4655
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4657	16.662	NaN	328840	30	0	63748	0.106	+			40227	STSENITQK	9	113	504.2535621866185	1006.4925714400371	2	504.25360107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STSENITQK_	DDX3Y|p.V655Gfs*2|1|0.09|ENSG00000067048|chrY:12918097-12918098|-/G|frameshift_variant;ENSG00000067048|ENST00000336079|DDX3Y;ENSG00000215301|ENST00000644876|DDX3X;nc|ENSG00000067048|O15523-2|DDX3Y;nc|ENSG00000215301|O00571-2|DDX3X	209.21039097705471	5.5375157516244266E-08	6				NaN	NaN	0	NaN	2142	2513	4655
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4658	16.664	NaN	59288	30	0	10879	0.106	+			39674	STIGETSNR	9	108	482.7375612913676	963.4605696495353	2	482.7374572753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STIGETSNR_	ENST00000556687.5_1_14:23375339-23380602:-|nuORF;nc|ENSG00000100461|Q86U06-2|RBM23;nc|ENSG00000100461|Q86U06-4|RBM23	167.22876102047192	0.0032399547248545047	6				NaN	NaN	0	NaN	2143	2513	4655
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4659	16.666	NaN	37371	30	0	4637.8	0.106				-1	 	0	101	459.77516008884203	917.5357672444841	2	459.77557373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2144	2513	4655
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4660	16.668	NaN	6493.7	30	0	1098.3	0.106	+			38881	SSNSYAIKK	9	72	499.2692565917969	NaN	0	499.2692565917969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSNSYAIKK_	ENSG00000083845|ENST00000196551|RPS5;ENST00000599232.1_1_19:58906030-58906114:+|nuORF	142.36107225718385	0.0009557606088349292	6				NaN	NaN	0	NaN	2145	2513	4655
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4661	16.67	NaN	5814.2	30	0	1048.1	0.106	+			38949	SSQQSVMSK	9	64	491.23680289365683	NaN	0	491.2369079589844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSQQSVMSK_	ENSG00000173193|ENST00000474629|PARP14;nc|ENSG00000173193|Q460N5-1|PARP14;nc|ENSG00000173193|Q460N5-3|PARP14;nc|ENSG00000173193|Q460N5-4|PARP14;nc|ENSG00000173193|Q460N5-5|PARP14;PARP14|p.N1416Efs*19|1|0.2|ENSG00000173193|chr3:122718388-122718389|-/A|frameshift_variant	102.0615471778698	0.01728177075344923	6				NaN	NaN	0	NaN	2146	2513	4655
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4662	16.672	NaN	3915.8	30	0	396.69	0.036			+	12132	GAGTRARGWK	10	69	530.2929928847678	1058.5714328363356	2	530.3241577148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GAGTRARGWK_	REV__OSM|p.E214Rfs*15|1|0.25|ENSG00000099985|chr22:30264002-30264002|C/-|frameshift_variant	48.601550744091256	0.46988609897316763	6				NaN	NaN	0	NaN	2147	2513	4655
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4681	16.707	NaN	352940	30	0	39235	0.214				-1	 	0	138	470.76338263286954	939.5122123325391	2	470.7641296386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2163	2516	4680
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4682	16.71	NaN	26028	30	0	2613.4	0.106	+			51292	YSAARSAAA	9	90	434.21932551182124	866.4240980904425	2	434.2197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YSAARSAAA_	ENSG00000189143|ENST00000340958|CLDN4	85.86182877749512	0.07653218437724067	6				NaN	NaN	0	NaN	2164	2516	4680
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4683	16.713	NaN	46525	30	0	12254	0.106	+			21919	KRTTGQAG	8	94	409.72875479418343	817.4429566551669	2	409.7297058105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KRTTGQAG_	ENSG00000160957|ENST00000617875|RECQL4;ENST00000534270.1_1_8:145742403-145742869:-|nuORF;ENST00000534538.1_2_8:145741967-145742869:-|nuORF;RECQL4|p.H81Ifs*2|1|0.12|ENSG00000160957|chr8:144517167-144517167|C/-|frameshift_variant;RECQL4|p.Q880Sfs*4|1|0.25|ENSG00000160957|chr8:144512965-144512966|-/G|frameshift_variant	60.97194046774394	0.49215940876911696	6				NaN	NaN	0	NaN	2165	2516	4680
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4684	16.714	NaN	80026	30	0	38370	0.106	+			13343	GKSGRWRR	8	69	334.8619947042139	1001.5641547128416	3	334.8626403808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GKSGRWRR_	ENSG00000166006|ENST00000549446|KCNC2;KCNC2|p.S304Hfs*12|1|0.31|ENSG00000166006|chr12:75051095-75051095|A/-|frameshift_variant;KCNC2|p.V393Mfs*3|1|0.03|ENSG00000166006|chr12:75050828-75050829|-/AT|frameshift_variant;nc|ENSG00000166006|Q96PR1-2|KCNC2;nc|ENSG00000166006|Q96PR1-3|KCNC2;nc|ENSG00000166006|Q96PR1-4|KCNC2;nc|ENSG00000166006|Q96PR1-5|KCNC2;nc|ENSG00000166006|Q96PR1-6|KCNC2	34.172542307311794	0.6954784234644539	6				NaN	NaN	0	NaN	2166	2516	4680
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4685	16.716	NaN	11656	30	0	1727.4	0.106	+			20162	KEKRPPQTL	9	76	548.8267141989642	1095.6388754647282	2	548.8284912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEKRPPQTL_	ENSG00000173467|ENST00000310398|AGR3	122.93914200107957	0.019420478173996256	6				NaN	NaN	0	NaN	2167	2516	4680
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4686	16.718	NaN	4599.4	30	0	807.1	0.036	+			16510	HEVDPVRRA	9	62	539.790989983078	1077.567427032956	2	539.7928466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HEVDPVRRA_	ENSG00000118971|ENST00000261254|CCND2;nc|ENSG00000118971|P30279-2|CCND2	51.33545320467046	0.2872990594074956	6				NaN	NaN	0	NaN	2168	2516	4680
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4687	16.719	NaN	49376	30	0	7396.5	0.14	+			14814	GTLGAVHK	8	79	391.72931899570494	781.4440850582099	2	391.72998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GTLGAVHK_	ENSG00000099785|ENST00000215555|MARCHF2;nc|ENSG00000099785|Q9P0N8-2|MARCHF2	94.00642277110589	0.2653416297186628	6				NaN	NaN	0	NaN	2169	2516	4680
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4706	16.757	NaN	33705	30	0	3667.2	0.166			+	38440	SSALLNKH	8	71	435.24492234453885	868.4752917558777	2	435.24530029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSALLNKH_	REV__ENSG00000143207|ENST00000367669|COP1;REV__nc|ENSG00000143207|Q8NHY2-2|COP1;REV__nc|ENSG00000143207|Q8NHY2-3|COP1;REV__nc|ENSG00000143207|Q8NHY2-4|COP1	143.01937276914788	0.26921844304278314	6				NaN	NaN	0	NaN	2185	2519	4705
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4707	16.76	NaN	22931	30	0	11242	0.106				-1	KVPEPPKMKE	10	59	400.22237962487344	1197.6453094748204	3	400.2226257324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_KVPEPPKM(Oxidation (M))KE_	ENSG00000283632|ENST00000413988|EXOC3L2	37.50817390946774	0.5721060100277453	6				NaN	NaN	0	NaN	2186	2519	4705
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4708	16.762	NaN	398980	30	0	90936	0.106	+			20104	KEKKEEQVI	9	102	565.823262057547	1129.631971181894	2	565.8248291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEKKEEQVI_	ENSG00000164587|ENST00000407193|RPS14;ENST00000519690.1_1_5:149827146-149827347:-|nuORF	117.7056744995986	0.022588689529990102	6				NaN	NaN	0	NaN	2187	2519	4705
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4709	16.764	NaN	441810	30	0	195520	0.106	+			9927	EQVEEKKKL	9	102	377.5516669430049	1129.6331714292146	3	377.5519714355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EQVEEKKKL_	ENSG00000149488|ENST00000358864|TMC2;nc|ENSG00000149488|Q8TDI7-3|TMC2;TMC2|p.P719Tfs*4|1|0.36|ENSG00000149488|chr20:2617281-2617282|-/C|frameshift_variant	74.1650062923329	0.12277912660386392	6				NaN	NaN	0	NaN	2188	2519	4705
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4710	16.766	NaN	11845	30	0	5927.4	0.106			+	15314	GTVGYEVQIKR	11	57	417.2346516049988	NaN	0	417.23468017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTVGYEVQIKR_	REV__ENSG00000011405|ENST00000691414|PIK3C2A;REV__ENST00000531428.1_1_11:17113817-17167232:-|nuORF	30.568863376406313	0.42918353898720446	6				NaN	NaN	0	NaN	2189	2519	4705
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4711	16.768	NaN	25296	30	0	7695.9	0.106				-1	 	0	77	494.3002572030162	986.5859614728324	2	494.3007507324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2190	2519	4705
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4712	16.769	NaN	37499	30	0	13826	0.035	+			14063	GSIKGELRK	9	82	329.8689319752518	986.5849665259555	3	329.86962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GSIKGELRK_	CHD1|p.E1321Kfs*22|3|0.3|ENSG00000153922|chr5:98870705-98870705|T/-|frameshift_variant;CHD1|p.E1321Rfs*17|1|0.48|ENSG00000153922|chr5:98870704-98870705|-/T|frameshift_variant;CHD1|p.V947Tfs*15|1|0.21|ENSG00000153922|chr5:98882003-98882004|CT/-|frameshift_variant;ENSG00000153922|ENST00000614616|CHD1;nc|ENSG00000153922|O14646-2|CHD1	56.72105179125745	0.24094814563026265	6				NaN	NaN	0	NaN	2191	2519	4705
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4731	16.806	NaN	16596	30	0	7531.8	0.214	+			20557	KFQVTMRGL	9	72	365.8715966545631	1094.5929605638894	3	365.8719787597656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_KFQVTM(Oxidation (M))RGL_	ENSG00000177294|ENST00000321535|FBXO39;FBXO39|p.A172Pfs*3|1|0.13|ENSG00000177294|chr17:6780375-6780375|A/-|frameshift_variant	47.95952297671804	0.32689736945648856	6				NaN	NaN	0	NaN	2207	2522	4730
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4732	16.81	NaN	6797.8	30	0	1119.1	0.106	+			6384	AVVEKIHAK	9	72	497.8051932297384	993.5958335262768	2	497.8056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVVEKIHAK_	ENSG00000172432|ENST00000307126|GTPBP2;nc|ENSG00000172432|Q9BX10-2|GTPBP2;nc|ENSG00000172432|Q9BX10-3|GTPBP2;nc|ENSG00000172432|Q9BX10-4|GTPBP2	145.46060221211434	0.007927189773590037	6				NaN	NaN	0	NaN	2208	2522	4730
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4733	16.812	NaN	11978	30	0	1797.3	0.106			+	22284	KTDFSISKGL	10	72	548.3044294592739	NaN	0	548.304443359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KTDFSISKGL_	REV__ENSG00000167377|ENST00000647773|ZNF23;REV__nc|ENSG00000167377|P17027-2|ZNF23;REV__nc|ENSG00000167377|P17027|ZNF23	72.87924865735499	0.13450315462291293	6				NaN	NaN	0	NaN	2209	2522	4730
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4734	16.814	NaN	6468.9	30	0	1030	0.106	+			34956	SAAKSLLKK	9	65	473.3076170844331	944.6006812356662	2	473.3078918457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SAAKSLLKK_	ENSG00000145349|ENST00000511664|CAMK2D;nc|ENSG00000145349|Q13557-10|CAMK2D;nc|ENSG00000145349|Q13557-11|CAMK2D;nc|ENSG00000145349|Q13557-12|CAMK2D;nc|ENSG00000145349|Q13557-3|CAMK2D;nc|ENSG00000145349|Q13557-4|CAMK2D;nc|ENSG00000145349|Q13557-5|CAMK2D;nc|ENSG00000145349|Q13557-6|CAMK2D;nc|ENSG00000145349|Q13557-8|CAMK2D;nc|ENSG00000145349|Q13557-9|CAMK2D;nc|ENSG00000145349|Q13557|CAMK2D	79.48907831485694	0.09975780661107167	6				NaN	NaN	0	NaN	2210	2522	4730
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4735	16.815	NaN	8430.4	30	0	2211.3	0.106	+			30896	QEKQEKPL	8	61	500.27651135758504	998.5384697819701	2	500.2770080566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QEKQEKPL_	ZNF658|p.R91Q|1|0.1|ENSG00000274349|chr9:66917838-66917838|G/A|missense_variant	120.62098272573253	0.23366758524054274	6				NaN	NaN	0	NaN	2211	2522	4730
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4736	16.817	NaN	3472.9	30	0	1551.7	0.035			+	45917	VAQPTRLPL	9	44	332.2057137693023	993.5953119081069	3	332.206298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VAQPTRLPL_	REV__CYC1|p.E254Rfs*3|1|0.5|ENSG00000179091|chr8:144096730-144096731|-/A|frameshift_variant;REV__CYC1|p.S93Afs*161|3|0.44|ENSG00000179091|chr8:144095973-144095973|C/-|frameshift_variant;REV__CYC1|p.S93Qfs*26|1|0.3|ENSG00000179091|chr8:144095972-144095973|-/C|frameshift_variant;REV__ENSG00000179091|ENST00000318911|CYC1	32.81241826257853	0.4965981579233955	6				NaN	NaN	0	NaN	2212	2522	4730
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4753	16.853	NaN	121610	30	0	59599	0.215				-1	 	0	79	406.2004561532666	810.3863593733332	2	406.2006530761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2226	2525	4752
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4754	16.857	NaN	6857.9	30	0	692.18	0.106			+	38526	SSCTVLAKK	9	66	468.76225395704694	935.5099549808939	2	468.7625732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSCTVLAKK_	REV__ENSG00000188124|ENST00000641124|OR2AG2;REV__ENSG00000279486|ENST00000641258|OR2AG1	74.25504064058377	0.12238981753128622	6				NaN	NaN	0	NaN	2227	2525	4752
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4755	16.859	NaN	7587.3	30	0	1280.8	0.106	+			36371	SETETKQRL	9	66	546.2875629161033	1090.5605728990065	2	546.2885131835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SETETKQRL_	ENSG00000047410|ENST00000367478|TPR;TPR|p.E1141Dfs*29|1|0.08|ENSG00000047410|chr1:186344085-186344086|-/CAGGTAAA|frameshift_variant;TPR|p.P2083Qfs*3|1|0.31|ENSG00000047410|chr1:186323735-186323735|G/-|frameshift_variant;TPR|p.T2133Lfs*63|1|0.03|ENSG00000047410|chr1:186322382-186322383|-/GTACTAATAAG|frameshift_variant;TPR|p.V1142Efs*26|1|0.08|ENSG00000047410|chr1:186344083-186344084|-/TT|frameshift_variant	93.19546047674547	0.05585629608842056	6				NaN	NaN	0	NaN	2228	2525	4752
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4756	16.861	NaN	10573	30	0	1211.1	0.106			+	-1	TPVYTDPKCCP	11	74	446.5322787224111	NaN	0	446.5323181152344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_TPVYTDPKC(Carbamidomethyl (C))C(Carbamidomethyl (C))P_	REV__CON__Q9BYR8;REV__ENSG00000212901|ENST00000391588|KRTAP3-1	27.64392233501311	0.4422187622456888	6				NaN	NaN	0	NaN	2229	2525	4752
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4757	16.863	NaN	2926.5	30	0	736.89	0.106				-1	GQCGPVGVRK	10	38	353.18990759076326	1056.5478933724899	3	353.19049072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_GQC(Carbamidomethyl (C))GPVGVRK_	ENSG00000204231|ENST00000374680|RXRB;nc|ENSG00000204231|P28702-3|RXRB;RXRB|p.G327Vfs*10|1|0.45|ENSG00000204231|chr6:33196447-33196447|C/-|frameshift_variant;RXRB|p.P176Lfs*4|1|0.65|ENSG00000204231|chr6:33198421-33198421|G/-|frameshift_variant	20.83715455343099	0.7096666582730032	6				NaN	NaN	0	NaN	2230	2525	4752
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4758	16.865	NaN	26124	30	0	4135	0.036	+			28350	NEKERQAAL	9	82	529.7825198121404	1057.5504866910808	2	529.783447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NEKERQAAL_	CAPG|p.A301V|1|0.35|ENSG00000042493|chr2:85395617-85395617|G/A|missense_variant;ENSG00000042493|ENST00000263867|CAPG;nc|ENSG00000042493|P40121-2|CAPG	70.8162118820467	0.13725933411854815	6				NaN	NaN	0	NaN	2231	2525	4752
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4776	16.901	NaN	4918	30	0	1662.9	0.214			+	13933	GRRSTVRR	8	33	329.8689319752518	986.5849665259555	3	330.53778076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GRRSTVRR_	REV__ENST00000343916.7_1_20:61472092-61472281:+|nuORF	14.664097394203935	0.7913966407026132	6				NaN	NaN	0	NaN	2246	2528	4775
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4777	16.905	NaN	9110	30	0	1158.6	0.106	+			20078	KEKGKISSL	9	74	495.30254548933414	988.5905380454683	2	495.30291748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEKGKISSL_	ENSG00000131558|ENST00000253861|EXOC4;ENST00000462055.5_1_7:132937857-133164897:+|nuORF;ENST00000486013.5_1_7:132937857-133314895:+|nuORF;EXOC4|p.N439Ifs*15|1|0.39|ENSG00000131558|chr7:133475456-133475456|A/-|frameshift_variant;EXOC4|p.N439Kfs*28|1|0.17|ENSG00000131558|chr7:133475455-133475456|-/A|frameshift_variant;nc|ENSG00000131558|Q96A65-2|EXOC4	104.01359247289065	0.03510646158778409	6				NaN	NaN	0	NaN	2247	2528	4775
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4778	16.907	NaN	3429	30	0	573.17	0.106			+	5280	ATVGPFTEKR	10	46	369.2060465424489	NaN	0	369.2059020996094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATVGPFTEKR_	REV__ENSG00000153029|ENST00000367580|MR1;REV__MR1|p.P230Qfs*5|1|0.22|ENSG00000153029|chr1:181052314-181052314|C/-|frameshift_variant;REV__nc|ENSG00000153029|Q95460-2|MR1	33.921630207806714	0.38879399011744475	6				NaN	NaN	0	NaN	2248	2528	4775
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4779	16.909	NaN	2422.1	30	0	417.57	0.106			+	-1	KLMEYQQD	8	65	535.74543938532	1069.4763258374398	2	535.7467041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_KLM(Oxidation (M))EYQQD_	REV__ENSG00000215788|ENST00000356876|TNFRSF25;REV__ENST00000473343.5_1_1:6521496-6523040:-|nuORF;REV__nc|ENSG00000215788|Q93038-10|TNFRSF25;REV__nc|ENSG00000215788|Q93038-11|TNFRSF25;REV__nc|ENSG00000215788|Q93038-2|TNFRSF25;REV__nc|ENSG00000215788|Q93038-8|TNFRSF25;REV__nc|ENSG00000215788|Q93038-9|TNFRSF25	60.97194046774394	0.49215940876911696	6				NaN	NaN	0	NaN	2249	2528	4775
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4780	16.911	NaN	54443	30	0	9149.2	0.106				-1	 	0	96	497.2711548403108	992.5277567474217	2	497.2716979980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2250	2528	4775
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4781	16.913	NaN	17896	30	0	3127.8	0.034	+			3495	ASSHVPIQK	9	96	483.77126308319833	965.5279732331967	2	483.7718200683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASSHVPIQK_	ENSG00000158290|ENST00000371322|CUL4B;nc|ENSG00000158290|Q13620|CUL4B	99.01295224348159	0.040209060045561164	6				NaN	NaN	0	NaN	2251	2528	4775
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4799	16.95	NaN	108560	30	0	35743	0.205				-1	 	0	88	486.784183694489	971.553814455778	2	486.7846374511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2266	2531	4798
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4800	16.953	NaN	155750	30	0	40091	0.106				-1	 	0	107	573.2856304142836	1144.556707895367	2	573.2866821289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2267	2531	4798
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4801	16.955	NaN	143850	30	0	67452	0.106				-1	 	0	111	324.8583854114507	971.5533268345521	3	324.85894775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2268	2531	4798
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4802	16.957	NaN	3571.1	30	0	1448.2	0.106			+	15718	GVQPLAGPTGP	11	43	331.85022628568714	NaN	0	331.8502502441406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GVQPLAGPTGP_	REV__ENST00000382214.7_1_20:388725-389346:+|nuORF	24.519189625965996	0.45614437233802635	6				NaN	NaN	0	NaN	2269	2531	4798
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4803	16.959	NaN	18022	30	0	3598	0.106	+			14817	GTLGGSPTK	9	75	409.22416221411686	NaN	0	409.2242126464844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTLGGSPTK_	ENSG00000110274|ENST00000278935|CEP164;ENST00000533223.1_1_11:117257895-117280842:+|nuORF;ENST00000533675.5_1_11:117265793-117282881:+|nuORF;nc|ENSG00000110274|Q9UPV0-2|CEP164	69.6276240434122	0.10825701912424071	6				NaN	NaN	0	NaN	2270	2531	4798
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4804	16.961	NaN	15652	30	0	2740.3	0.036	+			39336	STCDHGIVAK	10	82	544.2627832209595	1086.5110135087189	2	544.2639770507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_STC(Carbamidomethyl (C))DHGIVAK_	ENSG00000130826|ENST00000369550|DKC1;nc|ENSG00000130826|O60832-2|DKC1	109.47833844074708	0.04954876308859735	6				NaN	NaN	0	NaN	2271	2531	4798
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4805	16.961	NaN	5547.7	30	0	672.59	0.14			+	9437	EKKWNNVL	8	77	515.7861936658736	1029.5578343985471	2	515.7877197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EKKWNNVL_	REV__ENSG00000197275|ENST00000336148|RAD54B;REV__ENST00000463267.5_1_8:95411790-95423517:-|nuORF;REV__RAD54B|p.F714Lfs*5|1|0.29|ENSG00000197275|chr8:94380250-94380250|A/-|frameshift_variant	68.78682469695295	0.41700713582915416	6				NaN	NaN	0	NaN	2272	2531	4798
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4823	16.998	NaN	21023	30	0	3686	0.214	+			19429	KAPVTKVAA	9	77	442.782009597545	883.5494662618901	2	442.78155517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAPVTKVAA_	ENSG00000107438|ENST00000329399|PDLIM1;ENST00000604187.1_1_14:50517346-50518003:+|nuORF	65.46538089061403	0.16805504838372562	6				NaN	NaN	0	NaN	2287	2534	4822
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4824	17.002	NaN	33843	30	0	6103.2	0.106			+	20024	KEISGSNVGI	10	91	502.2748015099848	1002.5350500867696	2	502.2751770019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEISGSNVGI_	REV__tr|U7SGN9|U7SGN9_FUSNU4-hydroxy-3-methylbut-2-en-1-yldiphosphatesynthase(flavodoxin)OS=FusobacteriumnucleatumCTI-5OX=1316586GN=ispGPE=3SV=1	66.9202029811203	0.3029018092171124	6				NaN	NaN	0	NaN	2288	2534	4822
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4825	17.004	NaN	7314	30	0	1271	0.106	+			22718	KVAPAPAVVKK	11	66	369.9127010203016	1106.7162736611049	3	369.91302490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KVAPAPAVVKK_	ENSG00000148303|ENST00000323345|RPL7A;ENST00000424041.1_1_20:36073469-36073910:-|nuORF;ENST00000463740.5_1_9:136215098-136217195:+|nuORF	94.4091291819064	0.0807249280027251	6				NaN	NaN	0	NaN	2289	2534	4822
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4826	17.006	NaN	5432.9	30	0	424.28	0.106				-1	 	0	76	554.3653477193338	1106.7161425054676	2	554.3662719726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2290	2534	4822
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4827	17.007	NaN	6514.6	30	0	1014.8	0.106			+	2135	ALKDPRTE	8	59	465.25558420696433	928.4966154807287	2	465.2557678222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ALKDPRTE_	REV__ENSG00000186994|ENST00000330915|KANK3;REV__nc|ENSG00000186994|Q6NY19-1|KANK3	53.351449002276354	0.5676011784961348	6				NaN	NaN	0	NaN	2291	2534	4822
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4828	17.009	NaN	4972.3	30	0	562.39	0.035	+			9884	EQKKRNDL	8	73	515.7861936658736	1029.5578343985471	2	515.2822875976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EQKKRNDL_	IL7|p.L150R|1|0.17|ENSG00000104432|chr8:78733798-78733798|A/C|missense_variant	67.49366992349736	0.4277823096851425	6				NaN	NaN	0	NaN	2292	2534	4822
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4829	17.01	NaN	5466.6	30	0	600.85	0.14			+	12217	GARPAGFL	8	49	394.72405238803725	787.4335518428745	2	394.72412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GARPAGFL_	REV__ENST00000528307.5_1_11:14539460-14541880:-|nuORF	29.841539824830324	0.7289191502596711	6				NaN	NaN	0	NaN	2293	2534	4822
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4847	17.049	NaN	13667	30	0	5143	0.214			+	33860	RRKNATLR	8	68	338.8810360143138	1013.6212786431414	3	338.8815612792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RRKNATLR_	REV__ENST00000436100.1_1_10:101874528-101874642:-|nuORF	52.936696900407355	0.5717071646657654	6				NaN	NaN	0	NaN	2308	2537	4846
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4848	17.053	NaN	7721.9	30	0	1096.6	0.106				-1	 	0	73	501.30804583180975	1000.6015387304195	2	501.3085632324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2309	2537	4846
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4849	17.055	NaN	10099	30	0	2437.4	0.106				-1	 	0	75	448.2108120738102	894.4070712144204	2	448.21124267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2310	2537	4846
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4850	17.057	NaN	15133	30	0	6344.9	0.106				-1	SVPIVQCLF	9	56	354.86018025300206	1061.5587113592062	3	354.86114501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_SVPIVQC(Carbamidomethyl (C))LF_	sp|F5HIG1|HEPA_HCMVMDNAhelicase/primasecomplex-associatedproteinOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL102PE=3SV=1;sp|P16827|HEPA_HCMVADNAhelicase/primasecomplex-associatedproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL102PE=2SV=2	25.57405402267927	0.5642445186134241	6				NaN	NaN	0	NaN	2311	2537	4846
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4851	17.058	NaN	73051	30	0	14065	0.106				-1	QSCVRVGRSQ	10	93	392.86816063821436	1175.5826525148432	3	392.86846923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_QSC(Carbamidomethyl (C))VRVGRSQ_	ENST00000460895.5_1_3:134498709-134670235:+|nuORF;ENST00000473867.5_3_3:134560356-134670235:+|nuORF;ENST00000474732.1_2_3:134571358-134670235:+|nuORF;ENST00000497173.5_3_3:134515011-134670235:+|nuORF	45.02220120713402	0.5028680121232791	6				NaN	NaN	0	NaN	2312	2537	4846
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4852	17.06	NaN	2350.5	30	0	146.83	0.036			+	10020	ERSPHAPRGP	10	63	552.2871524372891	1102.5597519413782	2	552.3065795898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ERSPHAPRGP_	REV__ENST00000291539.10_1_21:44152027-44153480:+|nuORF	42.86426827375447	0.522752283233888	6				NaN	NaN	0	NaN	2313	2537	4846
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4853	17.061	NaN	5287.2	30	0	624.46	0.14	+			40228	STSENITQK	9	64	504.2535621866185	1006.4925714400371	2	504.2535705566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STSENITQK_	DDX3Y|p.V655Gfs*2|1|0.09|ENSG00000067048|chrY:12918097-12918098|-/G|frameshift_variant;ENSG00000067048|ENST00000336079|DDX3Y;ENSG00000215301|ENST00000644876|DDX3X;nc|ENSG00000067048|O15523-2|DDX3Y;nc|ENSG00000215301|O00571-2|DDX3X	88.17693792209575	0.07000514020414955	6				NaN	NaN	0	NaN	2314	2537	4846
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4871	17.1	NaN	26525	30	0	6888.4	0.214				-1	 	0	88	475.74243774729604	949.4703225613921	2	475.74273681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2329	2540	4870
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4872	17.104	NaN	21453	30	0	8714.8	0.106				-1	 	0	73	374.56037830133187	1120.6593055041956	3	374.5606689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2330	2540	4870
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4873	17.106	NaN	26924	30	0	4360.7	0.106				-1	 	0	86	467.7178814641198	933.4212099950396	2	467.71826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2331	2540	4870
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4874	17.108	NaN	9370	30	0	1709.3	0.106				-1	 	0	70	561.3367535777879	1120.6589542223758	2	561.3377075195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2332	2540	4870
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4875	17.11	NaN	40739	30	0	17582	0.106				-1	 	0	70	417.23939160978324	832.4642302863665	2	417.2398376464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2333	2540	4870
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4876	17.111	NaN	9674.7	30	0	957.23	0.036	+			5444	ATYREGMTK	9	74	528.7602758892668	1055.5059988453336	2	528.7611083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATYREGMTK_	ENSG00000142507|ENST00000270586|PSMB6;ENST00000575643.1_1_17:4701246-4701714:+|nuORF	72.2432373244024	0.13108886737667413	6				NaN	NaN	0	NaN	2334	2540	4870
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4877	17.112	NaN	13678	30	0	1277.6	0.139	+			17941	IGNLSSPVSP	10	79	485.766044834796	NaN	0	485.7660217285156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IGNLSSPVSP_	ENSG00000196531|ENST00000454682|NACA	74.25504064058377	0.12773286341944762	6				NaN	NaN	0	NaN	2335	2540	4870
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4895	17.151	NaN	17071	30	0	2342.3	0.214	+			42487	TANDANTKY	9	80	499.23228647513764	996.4500200170753	2	499.23272705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TANDANTKY_	ENSG00000149182|ENST00000524782|ARFGAP2;ENST00000395449.7_1_11:47187835-47198404:-|nuORF;ENST00000524727.5_1_11:47194869-47198404:-|nuORF;ENST00000527097.5_1_11:47193699-47198404:-|nuORF;nc|ENSG00000149182|Q8N6H7-2|ARFGAP2	109.82975700811294	0.02917171107062681	6				NaN	NaN	0	NaN	2350	2543	4894
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4896	17.155	NaN	7012.9	30	0	1716.2	0.106	+			22521	KTQEIFHSK	9	72	559.3030638346681	1116.5915747361362	2	559.3040161132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTQEIFHSK_	ENSG00000108557|ENST00000353383|RAI1;nc|ENSG00000258436|Q7Z5J4-2|RAI1;nc|ENSG00000258436|Q7Z5J4-3|RAI1	120.27252224102466	0.02103478360410217	6				NaN	NaN	0	NaN	2351	2543	4894
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4897	17.157	NaN	14635	30	0	1252.9	0.106	+			10356	ETVKDLGKALG	11	85	565.823262057547	1129.631971181894	2	565.8229370117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ETVKDLGKALG_	DNAH2|p.I2363Yfs*40|1|0.31|ENSG00000183914|chr17:7792278-7792278|C/-|frameshift_variant;DNAH2|p.K4326Rfs*84|3|0.27|ENSG00000183914|chr17:7832920-7832920|C/-|frameshift_variant;DNAH2|p.Q4263Sfs*13|1|0.12|ENSG00000183914|chr17:7832639-7832639|C/-|frameshift_variant;ENSG00000183914|ENST00000572933|DNAH2;ENST00000574518.1_1_17:7674005-7689702:+|nuORF;nc|ENSG00000183914|Q9P225-2|DNAH2	107.45493779368988	0.045275086874925735	6				NaN	NaN	0	NaN	2352	2543	4894
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4898	17.159	NaN	8522.3	30	0	931.4	0.106	+			29623	PGARSHRRK	9	54	355.5451299236146	NaN	0	355.54510498046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PGARSHRRK_	ENST00000006053.6_2_16:57406464-57416157:+|nuORF;ENST00000563383.1_2_16:57406464-57416157:+|nuORF;ENST00000564948.1_1_16:57406535-57416157:+|nuORF;ENST00000565912.1_1_16:57413477-57416157:+|nuORF	20.94693142431847	0.3660861156085067	6				NaN	NaN	0	NaN	2353	2543	4894
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4899	17.161	NaN	4832.1	30	0	442.03	0.106				-1	CVIRFQYYEDS	11	68	493.89033564146195	NaN	0	493.8902893066406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_C(Carbamidomethyl (C))VIRFQYYEDS_	ITGB3|p.V691I|1|0.24|ENSG00000259207|chr17:47302777-47302777|G/A|missense_variant	28.5767321226876	0.4380616241468488	6				NaN	NaN	0	NaN	2354	2543	4894
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4900	17.163	NaN	5386	30	0	981.49	0.037				-1	TILCLMHNI	9	64	372.19620820980305	NaN	0	372.19622802734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_TILC(Carbamidomethyl (C))LMHNI_	ENST00000570086.5_1_16:81009992-81030554:-|nuORF	39.252832667884924	0.27938773122138094	6				NaN	NaN	0	NaN	2355	2543	4894
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4901	17.163	NaN	4487.5	30	0	480.99	0.139				-1	 	0	65	457.7080079641843	913.4014629951686	2	457.7084045410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2356	2543	4894
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4919	17.203	NaN	41686	30	0	5772.3	0.214	+			32946	REAVEQQKV	9	81	543.79812960238	1085.5817062715598	2	543.7991333007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_REAVEQQKV_	ENSG00000125844|ENST00000377813|RRBP1;nc|ENSG00000125844|Q9P2E9-3|RRBP1;RRBP1|p.A628Gfs*69|1|0.35|ENSG00000125844|chr20:17621915-17621916|-/T|frameshift_variant	109.43880257439609	0.029570636687953285	6				NaN	NaN	0	NaN	2371	2546	4918
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4920	17.206	NaN	23763	30	0	5912.7	0.106				-1	 	0	61	413.18995629829936	824.3653596633987	2	413.1903991699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2372	2546	4918
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4921	17.208	NaN	27626	30	0	5641.3	0.106				-1	 	0	86	474.7529012116152	947.4912494900304	2	474.75311279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2373	2546	4918
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4922	17.21	NaN	7532.3	30	0	1085.4	0.106			+	-1	GCCFPCGDK	9	73	522.1914566796178	1042.3683604260355	2	522.1928100585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_GC(Carbamidomethyl (C))CFPC(Carbamidomethyl (C))GDK_	REV__PRICKLE1|p.R236C|1|0.32|ENSG00000139174|chr12:42466263-42466263|G/A|missense_variant	58.78195531508484	0.22376836668196862	6				NaN	NaN	0	NaN	2374	2546	4918
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4923	17.212	NaN	5773.6	30	0	2335.9	0.106	+			1328	AETGSGKTL	9	61	432.2268581087924	NaN	0	432.22686767578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AETGSGKTL_	DDX24|p.S507Ffs*17|1|0.26|ENSG00000089737|chr14:94060491-94060492|-/A|frameshift_variant;ENSG00000089737|ENST00000621632|DDX24;ENSG00000182810|ENST00000332395|DDX28;ENST00000555762.1_1_14:94524146-94547480:-|nuORF;nc|ENSG00000089737|Q9GZR7-2|DDX24	56.43379154798735	0.16452882468284893	6				NaN	NaN	0	NaN	2375	2546	4918
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4924	17.214	NaN	42062	30	0	9489.4	0.035	+			35161	SAIDKMTKK	9	83	511.28857755497427	1020.5626021767486	2	511.2891845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SAIDKMTKK_	CTNNA1|p.K493Nfs*31|1|0.19|ENSG00000044115|chr5:138917827-138917827|A/-|frameshift_variant;CTNNA1|p.T832*|1|0.29|ENSG00000044115|chr5:138933859-138933862|CAGA/-|frameshift_variant;ENSG00000044115|ENST00000302763|CTNNA1;ENST00000515849.2_1_5:114726864-114727050:-|nuORF;ENST00000517534.5_1_5:138163374-138223382:+|nuORF;nc|ENSG00000044115|P35221-2|CTNNA1	152.06079943815163	0.00638878961959199	6				NaN	NaN	0	NaN	2376	2546	4918
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4925	17.214	NaN	2593	30	0	344.52	0.139	+			23501	LAGLPAQLR	9	63	469.7922847369775	937.570016540755	2	469.7924499511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LAGLPAQLR_	ENSG00000091536|ENST00000647165|MYO15A;MYO15A|p.E2245Kfs*8|1|0.44|ENSG00000091536|chr17:18148533-18148533|G/-|frameshift_variant;MYO15A|p.P2208Rfs*45|1|0.09|ENSG00000091536|chr17:18148138-18148138|C/-|frameshift_variant	35.200714571348534	0.47427825964483533	6				NaN	NaN	0	NaN	2377	2546	4918
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4943	17.252	NaN	47075	30	0	6858.6	0.214	+			47839	VSLCFHRT	8	85	481.74811944500516	961.4816859568103	2	481.7483825683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSLCFHRT_	ENSG00000137275|ENST00000259808|RIPK1;nc|ENSG00000137275|Q13546-2|RIPK1	79.45101966838831	0.3281480470254892	6				NaN	NaN	0	NaN	2392	2549	4942
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4944	17.256	NaN	16803	30	0	2596.8	0.106	+			22780	KVFDAKPSAK	10	80	545.8158831071331	1089.6172132810661	2	545.81689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVFDAKPSAK_	ENSG00000143889|ENST00000449105|HNRNPLL;nc|ENSG00000143889|Q8WVV9-4|HNRNPLL;nc|ENSG00000143889|Q8WVV9-5|HNRNPLL	177.56662115801413	0.0014809345314152106	6				NaN	NaN	0	NaN	2393	2549	4942
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4945	17.258	NaN	12602	30	0	2687.9	0.106				-1	VMEEMVVS	8	69	478.2088304308521	954.4031079285043	2	478.2091979980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Oxidation (M)	_VM(Oxidation (M))EEM(Oxidation (M))VVS_	ENSG00000173064|ENST00000682272|HECTD4;HECTD4|p.A3108Gfs*4|1|0.12|ENSG00000173064|chr12:112185242-112185243|CC/-|frameshift_variant;HECTD4|p.A3108Rfs*26|1|0.37|ENSG00000173064|chr12:112185242-112185242|C/-|frameshift_variant;HECTD4|p.A4187Pfs*44|1|0.07|ENSG00000173064|chr12:112163201-112163201|C/-|frameshift_variant;HECTD4|p.L1880Pfs*22|1|0.19|ENSG00000173064|chr12:112231674-112231675|-/TAGGA|frameshift_variant;nc|ENSG00000173064|Q9Y4D8-2|HECTD4;nc|ENSG00000173064|Q9Y4D8-4|HECTD4;nc|ENSG00000173064|Q9Y4D8|HECTD4	33.51558372728122	0.7005509609380386	6				NaN	NaN	0	NaN	2394	2549	4942
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4946	17.26	NaN	7664.6	30	0	712.14	0.106				-1	GQCPMRVQK	9	76	552.2753904693996	1102.536228005599	2	552.2765502929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_GQC(Carbamidomethyl (C))PMRVQK_	ENSG00000165475|ENST00000298248|CRYL1;nc|ENSG00000165475|Q9Y2S2-2|CRYL1	87.75429964447693	0.0711966946989736	6				NaN	NaN	0	NaN	2395	2549	4942
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4947	17.262	NaN	4359.2	30	0	554.61	0.106			+	33084	REKRKKDP	8	70	528.8167467875315	1055.618940641863	2	528.8175659179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_REKRKKDP_	REV__ENSG00000125944|ENST00000302271|HNRNPR;REV__HNRNPR|p.W594Gfs*15|1|0.23|ENSG00000125944|chr1:23310575-23310576|CA/-|frameshift_variant;REV__nc|ENSG00000125944|O43390-2|HNRNPR;REV__nc|ENSG00000125944|O43390-3|HNRNPR;REV__nc|ENSG00000125944|O43390-4|HNRNPR	56.72105179125745	0.5342425954139568	6				NaN	NaN	0	NaN	2396	2549	4942
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4948	17.263	NaN	6648.7	30	0	658.05	0.036	+			39347	STCGKCGYPAK	11	80	557.7537560005936	1113.4929590679872	2	557.7550659179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STCGKCGYPAK_	ENSG00000145592|ENST00000274242|RPL37;ENST00000504562.1_1_5:40832608-40835123:-|nuORF;ENST00000507642.5_1_5:40832592-40834660:-|nuORF	96.66504779109242	0.07148984068916604	6				NaN	NaN	0	NaN	2397	2549	4942
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4949	17.264	NaN	4344.9	30	0	804.14	0.145				-1	WPWLLMATL	9	37	382.8726469663914	1145.5961114993743	3	382.873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_WPWLLM(Oxidation (M))ATL_	chr17:58415759-58417017|443|15.45|0.8|4.27|-|ENST00000577716|RNF43,RNF43;ENSG00000108375|ENST00000407977|RNF43;nc|ENSG00000108375|Q68DV7-2|RNF43;nc|ENSG00000108375|Q68DV7-4|RNF43;RNF43|p.A33Gfs*7|1|1.0|ENSG00000108375|chr17:58415482-58415483|-/A|frameshift_variant;RNF43|p.A629Pfs*71|1|0.56|ENSG00000108375|chr17:58357891-58357891|C/-|frameshift_variant;RNF43|p.C119Lfs*6|1|0.32|ENSG00000108375|chr17:58370931-58370932|-/G|frameshift_variant;RNF43|p.G659Vfs*41|19|0.36|ENSG00000108375|chr17:58357800-58357800|C/-|frameshift_variant;RNF43|p.H295Ifs*124|1|0.71|ENSG00000108375|chr17:58360218-58360218|G/-|frameshift_variant;RNF43|p.P441Hfs*2|1|0.35|ENSG00000108375|chr17:58358454-58358455|-/T|frameshift_variant;RNF43|p.R117Pfs*41|1|0.52|ENSG00000108375|chr17:58370936-58370936|C/-|frameshift_variant	35.61828744233558	0.47037581924408073	6				NaN	NaN	0	NaN	2398	2549	4942
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4967	17.304	NaN	708640	30	0	118050	0.173	+			41434	SVNGKVLSK	9	132	466.28146325660623	930.5483735800125	2	466.2820129394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVNGKVLSK_	ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2;NOMO1|p.P1102Hfs*42|1|0.36|ENSG00000103512|chr16:14886838-14886838|C/-|frameshift_variant;NOMO1|p.P141Sfs*12|1|0.33|ENSG00000103512|chr16:14846592-14846593|-/AG|frameshift_variant	136.5150327860613	0.012115003498012726	6				NaN	NaN	0	NaN	2413	2552	4966
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4968	17.307	NaN	49967	30	0	15512	0.106	+			391	AASEAGRAM	9	106	432.20494355578575	862.3953341783715	2	432.2056579589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AASEAGRAM_	ENSG00000071859|ENST00000393600|FAM50A	77.31757898189308	0.1091473830098891	6				NaN	NaN	0	NaN	2414	2552	4966
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4969	17.309	NaN	20511	30	0	5576.1	0.106	+			15091	GTQGSPITK	9	69	444.74234848717623	887.4701440411525	2	444.74298095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTQGSPITK_	ENSG00000110237|ENST00000263674|ARHGEF17;ENST00000536481.1_1_11:73075528-73075729:+|nuORF	143.37361013837676	0.008897369944672323	6				NaN	NaN	0	NaN	2415	2552	4966
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4970	17.31	NaN	19722	30	0	4772.2	0.106			+	44147	TQKAWKGKR	9	79	368.22080561441135	1101.640587443434	3	368.20501708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TQKAWKGKR_	REV__ENST00000343882.10_1_6:108986065-109001113:+|nuORF	42.396135135203025	0.392153681582562	6				NaN	NaN	0	NaN	2416	2552	4966
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4971	17.312	NaN	10535	30	0	3221.9	0.106	+			15807	GVVRIYHRK	9	57	376.5643874463613	1126.671332939284	3	376.5647277832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GVVRIYHRK_	ENSG00000164754|ENST00000297338|RAD21;RAD21|p.M287Yfs*6|1|0.04|ENSG00000164754|chr8:116856244-116856245|-/A|frameshift_variant	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	2417	2552	4966
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4972	17.314	NaN	4251.8	30	0	626.67	0.106			+	-1	FIGFEPNLDVC	11	77	655.80810546875	NaN	0	655.80810546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_FIGFEPNLDVC(Carbamidomethyl (C))_	REV__DNAH8|p.D4227Afs*7|1|0.04|ENSG00000124721|chr6:39008929-39008930|-/CAGTGTT|frameshift_variant;REV__DNAH8|p.F2607Lfs*22|2|0.32|ENSG00000124721|chr6:38886999-38886999|T/-|frameshift_variant;REV__DNAH8|p.F2835Lfs*10|1|0.14|ENSG00000124721|chr6:38899865-38899865|T/-|frameshift_variant;REV__DNAH8|p.Q3444Rfs*16|1|0.31|ENSG00000124721|chr6:38926073-38926073|C/-|frameshift_variant;REV__DNAH8|p.S2184Lfs*8|1|0.39|ENSG00000124721|chr6:38872741-38872741|T/-|frameshift_variant;REV__DNAH8|p.V3263Sfs*23|1|0.16|ENSG00000124721|chr6:38918047-38918048|-/A|frameshift_variant;REV__DNAH8|p.V3263Sfs*28|1|0.47|ENSG00000124721|chr6:38918048-38918048|A/-|frameshift_variant;REV__ENSG00000124721|ENST00000327475|DNAH8;REV__nc|ENSG00000124721|Q96JB1-2|DNAH8;REV__nc|ENSG00000124721|Q96JB1|DNAH8	60.11826168202944	0.2317136047664224	6				NaN	NaN	0	NaN	2418	2552	4966
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4973	17.316	NaN	4921	30	0	542.2	0.036	+			20452	KEVEERPAP	9	71	527.7808227539062	NaN	0	527.7808227539062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KEVEERPAP_	ENSG00000130429|ENST00000646101|ARPC1B	123.20810148215591	0.0016355521601317592	6				NaN	NaN	0	NaN	2419	2552	4966
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5008	17.389	NaN	19280	30	0	3876.6	0.214	+			35014	SACHKYFEK	9	81	390.51803754720464	1168.532283241814	3	390.518310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SAC(Carbamidomethyl (C))HKYFEK_	ENSG00000163993|ENST00000296370|S100P;ENST00000513778.1_1_4:6695618-6698766:+|nuORF;S100P|p.T82M|1|0.3|ENSG00000163993|chr4:6696999-6696999|C/T|missense_variant	94.4091291819064	0.0524345700464502	6				NaN	NaN	0	NaN	2448	2558	5007
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5009	17.393	NaN	60954	30	0	17419	0.106				-1	 	0	90	453.7474250605744	905.4802971879488	2	453.74786376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2449	2558	5007
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5010	17.395	NaN	43741	30	0	17013	0.106	+			40377	STTTTQITK	9	79	490.7659352644012	979.5173175956024	2	490.7662658691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STTTTQITK_	ENSG00000159023|ENST00000343067|EPB41;ENST00000462032.1_1_1:29424324-29436027:+|nuORF;nc|ENSG00000159023|P11171-2|EPB41;nc|ENSG00000159023|P11171-3|EPB41;nc|ENSG00000159023|P11171-5|EPB41;nc|ENSG00000159023|P11171-6|EPB41	138.06239232086	0.011389075116295402	6				NaN	NaN	0	NaN	2450	2558	5007
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5011	17.396	NaN	25211	30	0	4928.3	0.106	+			35106	SAGDVAVQK	9	77	437.7346980567095	NaN	0	437.734619140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SAGDVAVQK_	ENSG00000164574|ENST00000297107|GALNT10;ENST00000517958.1_1_5:153783698-153796529:+|nuORF;ENST00000520647.5_1_5:153755841-153792087:+|nuORF;nc|ENSG00000164574|Q86SR1-2|GALNT10;nc|ENSG00000164574|Q86SR1-4|GALNT10	117.81106730687013	0.0026430897281881707	6				NaN	NaN	0	NaN	2451	2558	5007
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5012	17.398	NaN	3486.7	30	0	1193.1	0.106			+	-1	HVRRPTMGY	9	58	566.791137403673	NaN	0	566.7910766601562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_HVRRPTM(Oxidation (M))GY_	REV__KIAA1549|p.P1759Rfs*66|3|0.22|ENSG00000122778|chr7:138852241-138852241|G/-|frameshift_variant	32.81241826257853	0.3119040447479903	6				NaN	NaN	0	NaN	2452	2558	5007
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5013	17.4	NaN	3429.6	30	0	281.07	0.037	+			26184	LSRPDQSPVV	10	64	366.53633425345566	NaN	0	366.536376953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSRPDQSPVV_	ENST00000487676.1_1_6:32629904-32629961:-|nuORF	38.753607047826485	0.3729281687199363	6				NaN	NaN	0	NaN	2453	2558	5007
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5014	17.401	NaN	2137.2	30	0	224.05	0.136	+			17963	IGTLICKNKK	10	46	373.23163634045494	NaN	0	373.2317199707031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IGTLICKNKK_	BPTF|p.D2844Afs*20|1|0.08|ENSG00000171634|chr17:67959766-67959767|-/C|frameshift_variant;BPTF|p.K2718Nfs*36|3|0.12|ENSG00000171634|chr17:67948150-67948150|A/-|frameshift_variant;ENSG00000171634|ENST00000306378|BPTF;nc|ENSG00000171634|Q12830-4|BPTF;nc|ENSG00000171634|Q12830|BPTF	23.52269567125451	0.42010282974921537	6				NaN	NaN	0	NaN	2454	2558	5007
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5032	17.44	NaN	59474	30	0	25235	0.214	+			30568	QAMKQWEY	8	83	542.2505520622601	1082.4865511913201	2	542.2515869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QAMKQWEY_	ENSG00000144893|ENST00000687756|MED12L;MED12L|p.K248Nfs*5|1|0.32|ENSG00000144893|chr3:151158702-151158702|A/-|frameshift_variant;MED12L|p.L1417Sfs*14|1|0.06|ENSG00000144893|chr3:151378044-151378044|C/-|frameshift_variant;MED12L|p.N1494Rfs*10|1|0.1|ENSG00000144893|chr3:151380219-151380220|-/GAAATAATGCATT|frameshift_variant;MED12L|p.S1098Ffs*63|1|0.23|ENSG00000144893|chr3:151367710-151367711|-/T|frameshift_variant;MED12L|p.S1098Pfs*15|1|0.19|ENSG00000144893|chr3:151367711-151367711|T/-|frameshift_variant;MED12L|p.T1760Pfs*44|1|0.42|ENSG00000144893|chr3:151388100-151388100|A/-|frameshift_variant;nc|ENSG00000144893|Q86YW9-2|MED12L;nc|ENSG00000144893|Q86YW9-3|MED12L;nc|ENSG00000144893|Q86YW9-4|MED12L;nc|ENSG00000144893|Q86YW9|MED12L	73.97473282117947	0.3737790450121076	6				NaN	NaN	0	NaN	2469	2561	5031
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5033	17.444	NaN	5693	30	0	2568.2	0.106			+	-1	IVMALSGLLI	10	45	349.21630640290437	1044.627089808913	3	349.2168884277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_IVM(Oxidation (M))ALSGLLI_	REV__ENSG00000156162|ENST00000414645|DPY19L4	36.446750945000026	0.5818864909973037	6				NaN	NaN	0	NaN	2470	2561	5031
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5034	17.446	NaN	16396	30	0	4749.9	0.106			+	13352	GKTTLETLLI	10	62	363.5568220707829	1087.6486368125488	3	363.5572204589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GKTTLETLLI_	REV__ENSG00000197122|ENST00000373578|SRC;REV__ENST00000477066.5_1_20:36025122-36031779:+|nuORF;REV__ENST00000493775.1_1_20:36030831-36031351:+|nuORF;REV__nc|ENSG00000197122|P12931-2|SRC;REV__nc|ENSG00000197122|P12931-3|SRC	21.68575002086885	0.7027366847906487	6				NaN	NaN	0	NaN	2471	2561	5031
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5035	17.448	NaN	7052.3	30	0	706.93	0.106	+			35983	SEHAVNKQL	9	71	513.2715153870038	1024.5284778408075	2	513.2722778320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SEHAVNKQL_	ENSG00000166595|ENST00000422424|CIAO2B;ENST00000562362.5_1_16:66966108-66968009:-|nuORF	107.00750918261382	0.032051501805654005	6				NaN	NaN	0	NaN	2472	2561	5031
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5036	17.449	NaN	12034	30	0	4022.7	0.106			+	20532	KFKAGGGVAAG	11	73	481.7759478017668	NaN	0	481.77587890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KFKAGGGVAAG_	REV__ENST00000574735.1_1_17:5012529-5015337:-|nuORF	49.44154591367651	0.3193297569249391	6				NaN	NaN	0	NaN	2473	2561	5031
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5037	17.451	NaN	13366	30	0	1543.6	0.037	+			33815	RQSCVMVQK	9	84	568.2881178562455	1134.561682779291	2	568.2894897460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_RQSC(Carbamidomethyl (C))VMVQK_	ENSG00000128833|ENST00000261839|MYO5C;ENST00000558902.5_1_15:52529812-52548856:-|nuORF;ENST00000560809.5_1_15:52532054-52548856:-|nuORF;MYO5C|p.E1050Sfs*8|1|0.32|ENSG00000128833|chr15:52229192-52229192|C/-|frameshift_variant;MYO5C|p.L1151Wfs*19|1|0.17|ENSG00000128833|chr15:52223719-52223719|A/-|frameshift_variant;MYO5C|p.L933Hfs*33|1|0.04|ENSG00000128833|chr15:52237552-52237553|-/T|frameshift_variant;MYO5C|p.L933Sfs*35|1|0.04|ENSG00000128833|chr15:52237553-52237554|-/AAGTGGA|frameshift_variant	146.78539889680295	0.007618400906539062	6				NaN	NaN	0	NaN	2474	2561	5031
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5038	17.452	NaN	21629	30	0	3238.1	0.141	+			2702	AQQKFKINK	9	83	552.829164633136	1103.6437763330719	2	552.8301391601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AQQKFKINK_	ENSG00000128708|ENST00000264108|HAT1;ENST00000457761.6_1_2:172821936-172844354:+|nuORF;nc|ENSG00000128708|O14929-2|HAT1	112.41091882917199	0.026537921851008135	6				NaN	NaN	0	NaN	2475	2561	5031
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5056	17.491	NaN	19140	30	0	6343.8	0.214	+			21155	KKTVESKE	8	76	474.7710945897901	947.5276362463802	2	474.7713623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KKTVESKE_	ARMC2|p.L395Yfs*7|1|0.23|ENSG00000118690|chr6:108912387-108912387|T/-|frameshift_variant;ARMC2|p.L815*|1|0.05|ENSG00000118690|chr6:108965134-108965134|T/-|frameshift_variant;ENSG00000118690|ENST00000392644|ARMC2	113.41158876095287	0.24327961457765637	6				NaN	NaN	0	NaN	2490	2564	5055
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5057	17.495	NaN	10212	30	0	2346.7	0.106	+			38285	SQQKVVITK	9	77	515.8157418876888	1029.6169308421775	2	515.81640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SQQKVVITK_	ENSG00000007952|ENST00000372966|NOX1;ENSG00000165168|ENST00000378588|CYBB;nc|ENSG00000007952|Q9Y5S8-3|NOX1;NOX1|p.R290H|1|0.17|ENSG00000007952|chrX:100851261-100851261|C/T|missense_variant	133.9934435666947	0.013297982075521412	6				NaN	NaN	0	NaN	2491	2564	5055
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5058	17.497	NaN	53175	30	0	22126	0.106	+			14463	GTCASWRGK	9	64	341.4986128881444	1021.4740092646332	3	341.4992980957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_GTC(Carbamidomethyl (C))ASWRGK_	ENSG00000265972|ENST00000582401|TXNIP;ENST00000488537.1_1_1:145440216-145440639:+|nuORF;nc|ENSG00000265972|Q9H3M7-2|TXNIP	77.31757898189308	0.1091473830098891	6				NaN	NaN	0	NaN	2492	2564	5055
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5059	17.499	NaN	7665	30	0	2067.6	0.106			+	-1	SIKRTAMKC	9	55	365.5324800492779	1093.5756107480338	3	365.5328369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_SIKRTAMKC(Carbamidomethyl (C))_	REV__ENSG00000091986|ENST00000206423|CCDC80;REV__nc|ENSG00000091986|Q76M96-2|CCDC80	41.42661286455405	0.403525789677298	6				NaN	NaN	0	NaN	2493	2564	5055
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5060	17.501	NaN	16759	30	0	3645.6	0.106	+			43575	TIDTYLLHSQ	10	76	397.54006531173974	1189.5983665354192	3	397.54022216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TIDTYLLHSQ_	ENSG00000151746|ENST00000652176|BICD1;nc|ENSG00000151746|Q96G01-3|BICD1	49.44154591367651	0.46214596422418036	6				NaN	NaN	0	NaN	2494	2564	5055
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5061	17.503	NaN	9585.8	30	0	3205.6	0.034	+			36397	SETKNANSL	9	74	482.24072608092644	NaN	0	482.2403564453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SETKNANSL_	ENSG00000137673|ENST00000260227|MMP7;ENST00000531200.1_1_11:102398162-102401431:-|nuORF;ENST00000533366.5_1_11:102395628-102401431:-|nuORF	66.96192283764107	0.11962625698446946	6				NaN	NaN	0	NaN	2495	2564	5055
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5062	17.503	NaN	4062.9	30	0	914.05	0.143			+	-1	MKNLAQTLGI	10	50	368.8740862137974	NaN	0	368.8741149902344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_M(Oxidation (M))KNLAQTLGI_	REV__tr|U7T0I5|U7T0I5_FUSNUFormate--tetrahydrofolateligaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=fhsPE=3SV=1	30.317721548370564	0.4006274431774794	6				NaN	NaN	0	NaN	2496	2564	5055
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5080	17.541	NaN	79880	30	0	10101	0.168	+			38675	SSIRHMIRK	9	90	376.5529076246827	1126.6368934742482	3	376.5535888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSIRHMIRK_	ENSG00000108107|ENST00000344063|RPL28;nc|ENSG00000108107|P46779-2|RPL28;nc|ENSG00000108107|P46779-3|RPL28	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	2511	2567	5079
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5081	17.544	NaN	13494	30	0	2717.2	0.106	+			22102	KSMNANTITK	10	69	554.2940762719668	1106.5735996107335	2	554.2950439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KSMNANTITK_	ENSG00000175467|ENST00000312397|SART1	147.30332882356183	0.008974348998861759	6				NaN	NaN	0	NaN	2512	2567	5079
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5082	17.546	NaN	9809.9	30	0	2093.8	0.106	+			37407	SLGGHSISK	9	66	443.24274284342255	NaN	0	443.2427978515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLGGHSISK_	ENSG00000189144|ENST00000536220|ZNF573;ZNF573|p.V65L|1|0.4|ENSG00000189144|chr19:37771573-37771573|C/A|missense_variant	150.36159442982594	0.0026033977239465623	6				NaN	NaN	0	NaN	2513	2567	5079
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5083	17.548	NaN	24731	30	0	4592.9	0.106	+			41435	SVNGKVLSK	9	89	466.28146325660623	930.5483735800125	2	466.780517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVNGKVLSK_	ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2;NOMO1|p.P1102Hfs*42|1|0.36|ENSG00000103512|chr16:14886838-14886838|C/-|frameshift_variant;NOMO1|p.P141Sfs*12|1|0.33|ENSG00000103512|chr16:14846592-14846593|-/AG|frameshift_variant	79.48907831485694	0.09975780661107167	6				NaN	NaN	0	NaN	2514	2567	5079
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5084	17.55	NaN	4823.5	30	0	356.93	0.106				-1	 	0	70	345.8727948688253	1034.596555206676	3	345.87335205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2515	2567	5079
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5085	17.551	NaN	33639	30	0	6287.3	0.106	+			44799	TTQRPLHINK	10	83	403.2344425058441	1206.6814981177322	3	403.2349548339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TTQRPLHINK_	CACNA1C|p.A2072Pfs*18|1|0.55|ENSG00000151067|chr12:2688729-2688729|G/-|frameshift_variant;CACNA1C|p.P2073Qfs*17|1|0.21|ENSG00000151067|chr12:2688733-2688733|C/-|frameshift_variant;ENSG00000151067|ENST00000399655|CACNA1C;nc|ENSG00000151067|Q13936-10|CACNA1C;nc|ENSG00000151067|Q13936-11|CACNA1C;nc|ENSG00000151067|Q13936-13|CACNA1C;nc|ENSG00000151067|Q13936-14|CACNA1C;nc|ENSG00000151067|Q13936-15|CACNA1C;nc|ENSG00000151067|Q13936-16|CACNA1C;nc|ENSG00000151067|Q13936-17|CACNA1C;nc|ENSG00000151067|Q13936-18|CACNA1C;nc|ENSG00000151067|Q13936-19|CACNA1C;nc|ENSG00000151067|Q13936-2|CACNA1C;nc|ENSG00000151067|Q13936-20|CACNA1C;nc|ENSG00000151067|Q13936-21|CACNA1C;nc|ENSG00000151067|Q13936-22|CACNA1C;nc|ENSG00000151067|Q13936-23|CACNA1C;nc|ENSG00000151067|Q13936-24|CACNA1C;nc|ENSG00000151067|Q13936-25|CACNA1C;nc|ENSG00000151067|Q13936-26|CACNA1C;nc|ENSG00000151067|Q13936-27|CACNA1C;nc|ENSG00000151067|Q13936-28|CACNA1C;nc|ENSG00000151067|Q13936-29|CACNA1C;nc|ENSG00000151067|Q13936-3|CACNA1C;nc|ENSG00000151067|Q13936-30|CACNA1C;nc|ENSG00000151067|Q13936-31|CACNA1C;nc|ENSG00000151067|Q13936-32|CACNA1C;nc|ENSG00000151067|Q13936-33|CACNA1C;nc|ENSG00000151067|Q13936-34|CACNA1C;nc|ENSG00000151067|Q13936-35|CACNA1C;nc|ENSG00000151067|Q13936-36|CACNA1C;nc|ENSG00000151067|Q13936-37|CACNA1C;nc|ENSG00000151067|Q13936-4|CACNA1C;nc|ENSG00000151067|Q13936-5|CACNA1C;nc|ENSG00000151067|Q13936-6|CACNA1C;nc|ENSG00000151067|Q13936-7|CACNA1C;nc|ENSG00000151067|Q13936-8|CACNA1C;nc|ENSG00000151067|Q13936-9|CACNA1C;nc|ENSG00000151067|Q13936|CACNA1C	98.58198989935565	0.0819402597096128	6				NaN	NaN	0	NaN	2516	2567	5079
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5086	17.553	NaN	4180.8	30	0	1189.3	0.035	+			21710	KQIRHKPE	8	65	518.3059295216583	1034.5973061101165	2	518.306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KQIRHKPE_	ENSG00000170871|ENST00000307659|KIAA0232;KIAA0232|p.S351*|1|0.05|ENSG00000170871|chr4:6861432-6861433|-/TG|frameshift_variant;KIAA0232|p.T785Nfs*3|1|0.28|ENSG00000170871|chr4:6862728-6862729|-/A|frameshift_variant	34.172542307311794	0.6954784234644539	6				NaN	NaN	0	NaN	2517	2567	5079
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5104	17.591	NaN	28619	30	0	5281.8	0.214	+			44618	TTEGRNALIHK	11	74	413.89800350572597	1238.672181117378	3	413.8984069824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTEGRNALIHK_	DHX9|p.L1065Cfs*20|1|0.41|ENSG00000135829|chr1:182883563-182883563|C/-|frameshift_variant;ENSG00000135829|ENST00000367549|DHX9;ENST00000485081.5_1_1:182847108-182856566:+|nuORF	51.19269402634007	0.4047928213175833	6				NaN	NaN	0	NaN	2532	2570	5103
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5105	17.594	NaN	12874	30	0	3391.2	0.106	+			5340	ATVPQASK	8	69	401.2266736797934	800.4387944263868	2	401.2269287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATVPQASK_	ENSG00000196531|ENST00000454682|NACA	87.69643885390035	0.28444366722805053	6				NaN	NaN	0	NaN	2533	2570	5103
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5106	17.597	NaN	4303.3	30	0	534.2	0.106	+			34351	RTQEEIVAK	9	68	537.3007533838309	1072.5869538344616	2	537.3019409179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RTQEEIVAK_	ENSG00000155660|ENST00000652332|PDIA4	63.42647028704847	0.1850514934184437	6				NaN	NaN	0	NaN	2534	2570	5103
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5107	17.598	NaN	22813	30	0	5325.1	0.106	+			12407	GEAKEREAL	9	93	501.76326121432686	1001.5119694954537	2	501.7636413574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEAKEREAL_	ENSG00000187147|ENST00000361799|RNF220;ENST00000474064.5_1_1:45098020-45115698:+|nuORF;ENST00000475378.5_1_1:45097966-45116444:+|nuORF;ENST00000480686.5_1_1:45110332-45115698:+|nuORF;nc|ENSG00000187147|Q5VTB9-3|RNF220	82.7504851949679	0.08565546331141553	6				NaN	NaN	0	NaN	2535	2570	5103
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5108	17.6	NaN	7931.7	30	0	5320.7	0.106			+	34546	RVLDRQDE	8	60	515.766999376916	1029.519445820632	2	515.7678833007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RVLDRQDE_	REV__ENST00000498762.1_1_X:55748624-55758085:+|nuORF	37.15910966729921	0.6739408393984688	6				NaN	NaN	0	NaN	2536	2570	5103
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5109	17.602	NaN	7010.6	30	0	675.24	0.036	+			8844	EEMQPMLQA	9	80	538.7405751697078	1075.4665974062154	2	538.75439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EEMQPMLQA_	ENSG00000185008|ENST00000696593|ROBO2;nc|ENSG00000185008|Q9HCK4-2|ROBO2;nc|ENSG00000185008|Q9HCK4-3|ROBO2;nc|ENSG00000185008|Q9HCK4|ROBO2;ROBO2|p.K1290Nfs*20|1|0.44|ENSG00000185008|chr3:77634974-77634974|A/-|frameshift_variant	37.15910966729921	0.4535818937225704	6				NaN	NaN	0	NaN	2537	2570	5103
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5110	17.603	NaN	15601	30	0	5521.5	0.143	+			43370	TGELAAEVLI	10	58	339.19366623079424	1014.5591692925827	3	339.1942443847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TGELAAEVLI_	ENSG00000066827|ENST00000377838|ZFAT;ENST00000523243.5_1_8:135490727-135577256:-|nuORF;nc|ENSG00000066827|Q9P243-2|ZFAT;nc|ENSG00000066827|Q9P243-4|ZFAT	34.172542307311794	0.6007644933930345	6				NaN	NaN	0	NaN	2538	2570	5103
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5128	17.642	NaN	17713	30	0	3369.6	0.215	+			22341	KTGEVLDTK	9	79	495.7761875278658	989.5378221225316	2	495.7765808105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTGEVLDTK_	ENSG00000196937|ENST00000359943|FAM3C	128.3478880297481	0.016146157547210084	6				NaN	NaN	0	NaN	2553	2573	5127
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5129	17.646	NaN	31510	30	0	5575.1	0.106	+			40057	STNNIAQAR	9	73	487.75358563461555	973.4926183360311	2	487.7539367675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STNNIAQAR_	ENSG00000172380|ENST00000370982|GNG12;GNG12|p.F63Efs*8|1|0.1|ENSG00000172380|chr1:67705483-67705484|-/GAGATTTACCTTC|frameshift_variant	163.1509380574825	0.003936019289634439	6				NaN	NaN	0	NaN	2554	2573	5127
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5130	17.648	NaN	25650	30	0	4060.6	0.106				-1	 	0	69	411.21082557768875	820.4070982221775	2	411.21124267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2555	2573	5127
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5131	17.65	NaN	26136	30	0	6606	0.106			+	42333	TAGKFESTQ	9	71	484.7387788823916	967.4630048315832	2	484.73919677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TAGKFESTQ_	REV__ENSG00000274391|ENST00000618007|TPTE;REV__nc|ENSG00000274391|P56180-2|TPTE;REV__nc|ENSG00000274391|P56180-3|TPTE;REV__TPTE|p.A61Hfs*53|1|0.04|ENSG00000274391|chr21:10552663-10552663|A/-|frameshift_variant;REV__TPTE|p.I462Yfs*2|1|0.16|ENSG00000274391|chr21:10602082-10602082|A/-|frameshift_variant	90.36981228632155	0.0638227155548745	6				NaN	NaN	0	NaN	2556	2573	5127
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5132	17.651	NaN	10801	30	0	1321.1	0.106	+			34459	RTYSGPMNK	9	74	527.2601653235209	1052.5057777138418	2	527.2609252929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RTYSGPMNK_	ENSG00000124429|ENST00000262753|POF1B;nc|ENSG00000124429|Q8WVV4-1|POF1B;nc|ENSG00000124429|Q8WVV4-3|POF1B;POF1B|p.T130Lfs*12|1|0.14|ENSG00000124429|chrX:85359600-85359601|-/AG|frameshift_variant	81.52500206392136	0.09095445986635249	6				NaN	NaN	0	NaN	2557	2573	5127
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5133	17.653	NaN	23994	30	0	4847	0.034	+			5524	AVAHALTEK	9	78	470.265287890762	938.516022848324	2	470.26617431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AVAHALTEK_	ENSG00000163468|ENST00000295688|CCT3;nc|ENSG00000163468|P49368-2|CCT3	162.25246889848123	0.0040893836092247005	6				NaN	NaN	0	NaN	2558	2573	5127
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5134	17.654	NaN	4727.5	30	0	1018.8	0.143	+			2222	ALRRLSGALD	10	56	357.8798778264188	1070.6178040794564	3	357.8802795410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ALRRLSGALD_	ENSG00000182324|ENST00000342291|KCNJ14	24.20275056022122	0.6821818413321409	6				NaN	NaN	0	NaN	2559	2573	5127
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5152	17.693	NaN	21441	30	0	5784.6	0.214				-1	 	0	81	543.3003460877793	1084.5861392423585	2	543.3014526367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2574	2576	5151
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5153	17.697	NaN	11575	30	0	2635.4	0.106			+	33741	RPPLSSAPPR	10	56	359.87653503857814	1076.6077757159344	3	359.8769836425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RPPLSSAPPR_	REV__ENST00000395863.7_1_20:55841273-55841597:-|nuORF	33.921630207806714	0.6028135429846169	6				NaN	NaN	0	NaN	2575	2576	5151
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5154	17.699	NaN	13879	30	0	2188.5	0.106			+	26535	LTRDADRSKRK	11	81	449.26063105172034	1344.760063755361	3	449.26104736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LTRDADRSKRK_	REV__ENSG00000114554|ENST00000393409|PLXNA1	26.749707702089633	0.7092085788826945	6				NaN	NaN	0	NaN	2576	2576	5151
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5155	17.701	NaN	7643.7	30	0	1063.7	0.106	+			41436	SVNGKVLSK	9	70	466.28146325660623	930.5483735800125	2	466.2818603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVNGKVLSK_	ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2;NOMO1|p.P1102Hfs*42|1|0.36|ENSG00000103512|chr16:14886838-14886838|C/-|frameshift_variant;NOMO1|p.P141Sfs*12|1|0.33|ENSG00000103512|chr16:14846592-14846593|-/AG|frameshift_variant	120.30596017624542	0.02101454110788768	6				NaN	NaN	0	NaN	2577	2576	5151
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5156	17.702	NaN	6478.7	30	0	1244.3	0.106			+	46034	VAYMLHSK	8	67	474.7502241508043	947.4858953684086	2	474.75311279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VAYMLHSK_	REV__ENSG00000102804|ENST00000458659|TSC22D1;REV__ENSG00000196428|ENST00000688009|TSC22D2;REV__ENST00000496314.1_1_13:45008764-45009186:-|nuORF;REV__nc|ENSG00000102804|Q15714-2|TSC22D1;REV__nc|ENSG00000102804|Q15714-3|TSC22D1;REV__nc|ENSG00000102804|Q15714-5|TSC22D1;REV__nc|ENSG00000196428|O75157|TSC22D2	71.37791200682192	0.3954169775488141	6				NaN	NaN	0	NaN	2578	2576	5151
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5157	17.704	NaN	7986.7	30	0	2403.5	0.036			+	20916	KIVDRVNHP	9	68	539.3114638880244	1076.6083748428487	2	539.3124389648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KIVDRVNHP_	REV__ENSG00000170085|ENST00000429602|SIMC1;REV__ENST00000481515.1_1_5:175723242-175749429:+|nuORF;REV__nc|ENSG00000170085|Q8NDZ2-3|SIMC1;REV__nc|ENSG00000170085|Q8NDZ2-4|SIMC1;REV__nc|ENSG00000170085|Q8NDZ2|SIMC1	41.42661286455405	0.403525789677298	6				NaN	NaN	0	NaN	2579	2576	5151
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5158	17.705	NaN	8284.9	30	0	2691.2	0.145	+			36801	SIDLPRRKK	9	51	371.5677280885612	1111.6813548658836	3	371.56805419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SIDLPRRKK_	ENSG00000135913|ENST00000258399|USP37;nc|ENSG00000135913|Q86T82-2|USP37	31.529811441608018	0.5085848003137583	6				NaN	NaN	0	NaN	2580	2576	5151
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5176	17.745	NaN	273980	30	0	44829	0.202	+			22112	KSNISVFTPPD	11	122	402.2119044812528	1203.6138840439585	3	402.2120666503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSNISVFTPPD_	ENSG00000139304|ENST00000644991|PTPRQ;nc|ENSG00000139304|Q9UMZ3|PTPRQ;PTPRQ|p.K1365Rfs*5|1|0.42|ENSG00000139304|chr12:80549539-80549539|A/-|frameshift_variant;PTPRQ|p.N2031Kfs*10|1|0.46|ENSG00000139304|chr12:80652805-80652806|-/A|frameshift_variant;PTPRQ|p.Q1869Afs*5|1|0.38|ENSG00000139304|chr12:80620361-80620362|-/A|frameshift_variant;PTPRQ|p.Q791Kfs*18|1|0.3|ENSG00000139304|chr12:80506122-80506122|C/-|frameshift_variant;PTPRQ|p.Y1402Lfs*5|1|0.3|ENSG00000139304|chr12:80549654-80549654|A/-|frameshift_variant	55.08391021199286	0.3673379875553588	6				NaN	NaN	0	NaN	2595	2579	5175
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5177	17.748	NaN	50477	30	0	13197	0.106	+			49184	VVMRDPNTK	9	89	530.2835895343246	1058.5526261354491	2	530.2846069335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVMRDPNTK_	chr12:54282662-54282800|482|460.96|0.0|25.46|+|ENST00000677249|HNRNPA1,HNRNPA1;ENSG00000135486|ENST00000340913|HNRNPA1;ENSG00000139675|ENST00000357495|HNRNPA1L2;ENSG00000224578|ENST00000565308|HNRNPA1L3;ENST00000441603.1_1_11:5593122-5593311:-|nuORF;ENST00000452488.1_1_2:41383770-41384067:+|nuORF;ENST00000457695.2_1_X:100110922-100111255:-|nuORF;ENST00000575692.1_1_17:2210089-2210875:+|nuORF;nc|ENSG00000135486|P09651-2|HNRNPA1;nc|ENSG00000135486|P09651-3|HNRNPA1	74.1650062923329	0.12277912660386392	6				NaN	NaN	0	NaN	2596	2579	5175
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5178	17.75	NaN	25369	30	0	13244	0.106	+			23189	KWSLHPSLPA	10	73	379.21182978605617	1134.6136599583685	3	379.2120361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KWSLHPSLPA_	ENST00000456101.6_1_6:109766698-109772967:-|nuORF;MICAL1|p.T754Qfs*150|1|0.53|ENSG00000135596|chr6:109446741-109446741|C/-|frameshift_variant	44.377184641726394	0.5088115166961078	6				NaN	NaN	0	NaN	2597	2579	5175
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5179	17.752	NaN	11862	30	0	4743	0.106				-1	VLKQPGCHKV	10	46	389.22133617676184	1164.6421791304856	3	389.2216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_VLKQPGC(Carbamidomethyl (C))HKV_	ENSG00000172432|ENST00000307126|GTPBP2;nc|ENSG00000172432|Q9BX10-2|GTPBP2;nc|ENSG00000172432|Q9BX10-4|GTPBP2	21.68575002086885	0.7027366847906487	6				NaN	NaN	0	NaN	2598	2579	5175
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5180	17.754	NaN	6942.4	30	0	613.46	0.106	+			40519	STYSSQIRK	9	82	535.2857077628692	NaN	0	535.2857666015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STYSSQIRK_	ENST00000469130.5_1_1:201751782-201763782:+|nuORF;nc|ENSG00000134369|Q8NEY1-2|NAV1;nc|ENSG00000134369|Q8NEY1-6|NAV1;nc|ENSG00000134369|Q8NEY1-7|NAV1	120.30596017624542	0.0020832630064203913	6				NaN	NaN	0	NaN	2599	2579	5175
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5181	17.755	NaN	51646	30	0	19551	0.106			+	2725	AQTWDLRLG	9	55	353.85790564502605	1058.5518875352782	3	353.85858154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AQTWDLRLG_	REV__ENST00000464989.5_1_2:220308425-220308515:+|nuORF	35.15202426646627	0.4747332964206883	6				NaN	NaN	0	NaN	2600	2579	5175
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5182	17.757	NaN	10477	30	0	3290.9	0.034			+	42569	TASNRNHN	8	64	457.2159608851314	912.4173688370628	2	457.21630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TASNRNHN_	REV__ENSG00000147124|ENST00000684689|ZNF41;REV__nc|ENSG00000147124|P51814-2|ZNF41;REV__nc|ENSG00000147124|P51814-3|ZNF41;REV__nc|ENSG00000147124|P51814-4|ZNF41;REV__nc|ENSG00000147124|P51814-5|ZNF41;REV__nc|ENSG00000147124|P51814-7|ZNF41;REV__nc|ENSG00000147124|P51814-8|ZNF41;REV__nc|ENSG00000147124|P51814|ZNF41	60.29395666154354	0.49887135096048313	6				NaN	NaN	0	NaN	2601	2579	5175
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5200	17.794	NaN	30207	30	0	16722	0.211			+	44143	TQGCERERSSQ	11	83	669.2969836610267	1336.5794143888534	2	669.294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_TQGC(Carbamidomethyl (C))ERERSSQ_	REV__ENSG00000253958|ENST00000519106|CLDN23	54.722347961057174	0.3705654281804646	6				NaN	NaN	0	NaN	2616	2582	5199
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5201	17.797	NaN	6222	30	0	959.79	0.106	+			19997	KEIEGVTKT	9	63	502.7840641313645	1003.553575329529	2	502.7846374511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEIEGVTKT_	ENSG00000131558|ENST00000253861|EXOC4	138.06239232086	0.011389075116295402	6				NaN	NaN	0	NaN	2617	2582	5199
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5202	17.799	NaN	13991	30	0	4632.2	0.106	+			40750	SVDGPVSQK	9	61	458.73974477099733	915.4649366087947	2	458.7400817871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVDGPVSQK_	ENSG00000119231|ENST00000323460|SENP5;nc|ENSG00000119231|Q96HI0-2|SENP5	85.16082228582465	0.07850854922700509	6				NaN	NaN	0	NaN	2618	2582	5199
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5203	17.801	NaN	11353	30	0	3771.4	0.106	+			44608	TTDRYIQQK	9	68	384.8715264745474	1151.5927500238422	3	384.8716735839844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TTDRYIQQK_	ENSG00000149480|ENST00000278823|MTA2;MTA2|p.A568Qfs*29|1|0.23|ENSG00000149480|chr11:62594402-62594402|T/-|frameshift_variant;MTA2|p.I556Hfs*8|1|0.29|ENSG00000149480|chr11:62594543-62594544|-/C|frameshift_variant;nc|ENSG00000149480|O94776-2|MTA2	46.45678178249821	0.34452392205506005	6				NaN	NaN	0	NaN	2619	2582	5199
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5204	17.803	NaN	19973	30	0	3752.2	0.106	+			22592	KTSTVPPSLRK	11	57	405.2466019696197	1212.717976509059	3	405.24676513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KTSTVPPSLRK_	ENSG00000213676|ENST00000375203|ATF6B;nc|ENSG00000213676|Q99941-2|ATF6B	75.56570413236392	0.18934020192193834	6				NaN	NaN	0	NaN	2620	2582	5199
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5205	17.805	NaN	6488.7	30	0	778.66	0.04	+			28497	NGWTCDCRLRG	11	62	446.53176528437535	1336.573466453326	3	446.53228759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_NGWTCDC(Carbamidomethyl (C))RLRG_	ENSG00000255690|ENST00000539664|TRIL;TRIL|p.G796Afs*4|1|0.12|ENSG00000255690|chr7:28955660-28955660|C/-|frameshift_variant	45.908116695636124	0.4771019740774998	6				NaN	NaN	0	NaN	2621	2582	5199
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5206	17.805	NaN	2944.9	30	0	347.02	0.14	+			47754	VSGPSSARNVA	11	64	522.7743409408591	1043.5341289485182	2	522.775146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VSGPSSARNVA_	ENST00000378052.5_1_7:148991082-148992133:+|nuORF;ENST00000476295.5_1_7:148991497-148992133:+|nuORF;ENST00000480864.1_1_7:148991400-148992133:+|nuORF	36.446750945000026	0.6065623449959539	6				NaN	NaN	0	NaN	2622	2582	5199
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5224	17.844	NaN	119020	30	0	18608	0.169	+			38270	SQNTDMVQK	9	97	525.7467943155829	1049.4790356979656	2	525.7479248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SQNTDMVQK_	ENSG00000113282|ENST00000411809|CLINT1	128.60217544463768	0.015992218256422188	6				NaN	NaN	0	NaN	2637	2585	5223
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5225	17.847	NaN	17542	30	0	4185.7	0.106				-1	 	0	68	425.23681678031375	848.4590806274275	2	425.2372741699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2638	2585	5223
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5226	17.849	NaN	19761	30	0	2085.3	0.106	+			34326	RTNEVVAIKK	10	79	386.5712328448442	1156.6918691347325	3	386.5714416503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RTNEVVAIKK_	ENSG00000160551|ENST00000261716|TAOK1;nc|ENSG00000160551|Q7L7X3-3|TAOK1;TAOK1-VMP1|1|fusion	68.84614121027924	0.2867470276772903	6				NaN	NaN	0	NaN	2639	2585	5223
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5227	17.851	NaN	5213.3	30	0	1746.3	0.106	+			6465	AVYGQNDIHHK	11	55	427.88195569898323	1280.6240376971498	3	427.8824157714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVYGQNDIHHK_	ENSG00000138757|ENST00000359707|G3BP2;nc|ENSG00000138757|Q9UN86-2|G3BP2	30.568863376406313	0.6691487505135859	6				NaN	NaN	0	NaN	2640	2585	5223
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5228	17.853	NaN	15661	30	0	1432.9	0.106				-1	 	0	79	412.7343278653439	823.4541027974878	2	412.7347717285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2641	2585	5223
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5229	17.855	NaN	6188.4	30	0	1219.4	0.106	+			46092	VDAKAQKL	8	69	436.7630729532362	871.5115929732724	2	436.763427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VDAKAQKL_	ACLY|p.G297Vfs*31|1|0.32|ENSG00000131473|chr17:41905635-41905635|C/-|frameshift_variant;ENSG00000131473|ENST00000352035|ACLY;nc|ENSG00000131473|P53396-2|ACLY	101.60071028292904	0.24979566554663588	6				NaN	NaN	0	NaN	2642	2585	5223
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5230	17.857	NaN	12249	30	0	2261.8	0.033			+	37798	SMAPVGRQ	8	76	431.21506187932715	860.4155708254543	2	431.2158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_SM(Oxidation (M))APVGRQ_	REV__ENSG00000275066|ENST00000612223|SYNRG;REV__nc|ENSG00000275066|Q9UMZ2-3|SYNRG;REV__nc|ENSG00000275066|Q9UMZ2-4|SYNRG;REV__nc|ENSG00000275066|Q9UMZ2-5|SYNRG;REV__nc|ENSG00000275066|Q9UMZ2-7|SYNRG;REV__nc|ENSG00000275066|Q9UMZ2-8|SYNRG;REV__nc|ENSG00000275066|Q9UMZ2-9|SYNRG;REV__SYNRG|p.N610Tfs*3|2|0.33|ENSG00000275066|chr17:37553894-37553894|T/-|frameshift_variant	79.9392285194092	0.32408006123154964	6				NaN	NaN	0	NaN	2643	2585	5223
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5248	17.893	NaN	66017	30	0	11179	0.152	+			37250	SKWCTLKE	8	78	526.2659255133232	1050.5172980934462	2	526.2667236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SKWC(Carbamidomethyl (C))TLKE_	ENST00000404220.7_1_21:34635801-34636137:+|nuORF	63.53385203322761	0.46679685265839455	6				NaN	NaN	0	NaN	2658	2588	5247
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5249	17.895	NaN	129850	30	0	66169	0.106			+	-1	GYCPKHCYPRG	11	93	697.80796174686	1393.6013705605199	2	697.8055419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_GYC(Carbamidomethyl (C))PKHC(Carbamidomethyl (C))YPRG_	REV__ENSG00000146215|ENST00000372569|CRIP3;REV__nc|ENSG00000146215|Q6Q6R5-2|CRIP3;REV__nc|ENSG00000146215|Q6Q6R5-4|CRIP3;REV__nc|ENSG00000146215|Q6Q6R5|CRIP3	49.44154591367651	0.42875387410569	6				NaN	NaN	0	NaN	2659	2588	5247
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5250	17.897	NaN	34928	30	0	16341	0.106				-1	 	0	65	418.22890054942536	834.4432481656507	2	418.22930908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2660	2588	5247
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5251	17.899	NaN	13747	30	0	2352	0.106	+			40065	STNNMAYNK	9	75	521.7337134979632	1041.4528740627263	2	521.734619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STNNMAYNK_	ENSG00000163110|ENST00000317968|PDLIM5	172.24860141594272	0.002383092361811508	6				NaN	NaN	0	NaN	2661	2588	5247
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5252	17.901	NaN	32542	30	0	4651	0.106				-1	 	0	87	592.3059654243348	1182.5973779154695	2	592.3067626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2662	2588	5247
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5253	17.903	NaN	16185	30	0	4719.8	0.106			+	-1	VRCCRPYK	8	69	541.2729537744693	1080.5313546157386	2	541.274169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_VRC(Carbamidomethyl (C))CRPYK_	REV__ENST00000410051.5_1_2:189406041-189406086:+|nuORF	42.47446043378293	0.6409579893742323	6				NaN	NaN	0	NaN	2663	2588	5247
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5254	17.905	NaN	2911.7	30	0	409.39	0.035			+	37397	SLGATQLSEL	10	58	509.7734207341642	1017.5322885351284	2	509.774169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SLGATQLSEL_	REV__ENSG00000178567|ENST00000322716|EPM2AIP1;REV__EPM2AIP1|p.D451Vfs*16|1|0.04|ENSG00000178567|chr3:36991726-36991727|-/CCATTTAA|frameshift_variant;REV__EPM2AIP1|p.N430Kfs*13|1|0.28|ENSG00000178567|chr3:36991788-36991789|-/T|frameshift_variant	64.20726635412375	0.3275756395432415	6				NaN	NaN	0	NaN	2664	2588	5247
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5272	17.941	NaN	83206	30	0	42391	0.16	+			15781	GVTRVTIRK	9	70	343.8884051159109	1028.6433859479328	3	343.8890380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVTRVTIRK_	ENSG00000196531|ENST00000454682|NACA;ENST00000419462.1_1_8:102381113-102381542:+|nuORF;nc|ENSG00000196531|E9PAV3-2|NACA;nc|ENSG00000196531|Q13765|NACA;nc|ENSG00000228224|Q9BZK3|NACA4P	101.25262130126117	0.03792372629710479	6				NaN	NaN	0	NaN	2679	2591	5271
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5273	17.944	NaN	79820	30	0	29176	0.106			+	14958	GTMSILGTMSR	11	77	385.1945662146121	1152.5618692440364	3	385.1949462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTMSILGTMSR_	REV__ENST00000514264.6_1_17:49242904-49243033:+|nuORF	42.33807565288922	0.5259510355945483	6				NaN	NaN	0	NaN	2680	2591	5271
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5274	17.946	NaN	22908	30	0	11274	0.106	+			32406	QVEHENVAR	9	61	541.2729537744693	1080.5313546157386	2	541.2740478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QVEHENVAR_	ENST00000426627.1_1_13:88543904-88544189:-|nuORF	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	2681	2591	5271
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5275	17.948	NaN	10736	30	0	3580.3	0.106	+			22587	KTSTVFSSK	9	71	492.7715313014673	NaN	0	492.7714538574219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTSTVFSSK_	nc|ENSG00000196275|Q86UP8-4|GTF2IRD2	150.81021883065287	0.0029749349228079835	6				NaN	NaN	0	NaN	2682	2591	5271
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5276	17.95	NaN	127760	30	0	19605	0.106				-1	 	0	122	450.7659352042693	899.5173174753386	2	450.7664489746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2683	2591	5271
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5277	17.951	NaN	50123	30	0	8593	0.106	+			40207	STSCPVVQK	9	89	503.2543267849373	1004.4941006366746	2	503.2552185058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_STSC(Carbamidomethyl (C))PVVQK_	ENSG00000130935|ENST00000253247|NOL11;ENST00000583108.5_1_17:65733963-65734484:+|nuORF	161.89823264540465	0.004149850016316161	6				NaN	NaN	0	NaN	2684	2591	5271
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5278	17.953	NaN	3088.6	30	0	925.04	0.038	+			440	AAVGIMNI	8	55	394.72169473323015	NaN	0	395.20697021484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AAVGIMNI_	ENST00000262056.13_1_12:53435504-53435621:+|nuORF	35.200714571348534	1.7418937515398478	6				NaN	NaN	0	NaN	2685	2591	5271
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5296	17.988	NaN	191620	30	0	23520	0.139	+			15433	GTYRDANIK	9	90	519.271583718363	1036.528614503526	2	519.2723388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTYRDANIK_	ENSG00000112531|ENST00000361752|QKI;nc|ENSG00000112531|Q96PU8-3|QKI;nc|ENSG00000112531|Q96PU8-5|QKI;nc|ENSG00000112531|Q96PU8-6|QKI;nc|ENSG00000112531|Q96PU8-8|QKI;nc|ENSG00000112531|Q96PU8-9|QKI	125.71293069911285	0.017741295328254008	6				NaN	NaN	0	NaN	2700	2594	5295
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5297	17.99	NaN	73727	30	0	12956	0.106	+			4398	ATHTAFVAK	9	90	473.2607182105604	NaN	0	473.26080322265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATHTAFVAK_	nc|ENSG00000120802|P42166|TMPO	90.36981228632155	0.04085092656593507	6				NaN	NaN	0	NaN	2701	2594	5295
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5298	17.992	NaN	90047	30	0	37875	0.106				-1	 	0	86	346.51673848361594	1036.5283860510478	3	346.5172119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2702	2594	5295
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5299	17.994	NaN	107910	30	0	24896	0.106	+			48906	VVDNGSGMCK	10	97	533.7352855260062	1065.4560181188124	2	533.7366333007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_VVDNGSGMC(Carbamidomethyl (C))K_	ACTBL2|p.R29Gfs*7|1|0.37|ENSG00000169067|chr5:57482623-57482623|G/-|frameshift_variant;ENSG00000075624|ENST00000646664|ACTB;ENSG00000169067|ENST00000423391|ACTBL2;ENST00000418351.1_1_15:44282253-44282364:-|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000477812.1_1_7:5569027-5569288:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF	120.27252224102466	0.026944837168485097	6				NaN	NaN	0	NaN	2703	2594	5295
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5300	17.996	NaN	14694	30	0	4235.1	0.106			+	569	ADGRHRGGAG	10	70	477.2371307160082	952.4597084988164	2	477.2376403808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ADGRHRGGAG_	REV__ENST00000262738.7_1_22:46932303-46932903:-|nuORF	37.81151784470057	0.569310847604193	6				NaN	NaN	0	NaN	2704	2594	5295
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5301	17.998	NaN	10591	30	0	1934.3	0.106				-1	 	0	73	336.88969140455674	1007.6472448138702	3	336.89019775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2705	2594	5295
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5302	18	NaN	19885	30	0	4124.8	0.034				-1	 	0	76	461.23476190775887	920.4549708823178	2	461.2350769042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2706	2594	5295
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5320	18.037	NaN	211980	30	0	20822	0.204	+			34371	RTQNVLGEK	9	123	522.7935544314696	NaN	0	522.7940063476562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTQNVLGEK_	ENSG00000149273|ENST00000531188|RPS3;ENST00000407940.1_1_6:7339375-7339741:-|nuORF;ENST00000529173.5_1_11:75110591-75112804:+|nuORF;nc|ENSG00000149273|P23396-2|RPS3	133.7523857240709	3.449643901654303E-05	6				NaN	NaN	0	NaN	2721	2597	5319
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5321	18.041	NaN	40131	30	0	9360.9	0.106				-1	 	0	79	706.8134976387831	1411.6124423443662	2	706.8111572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2722	2597	5319
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5322	18.043	NaN	27316	30	0	3298.9	0.106				-1	 	0	94	473.7448731752306	945.4751934172613	2	473.7452697753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2723	2597	5319
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5323	18.045	NaN	49330	30	0	11160	0.106	+			7919	DSESEETL	8	69	455.1877711040409	908.3609892748818	2	455.1882629394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DSESEETL_	ENSG00000035928|ENST00000349703|RFC1;ENST00000504849.5_1_4:39324953-39367861:-|nuORF;nc|ENSG00000035928|P35251|RFC1;RFC1|p.N510Mfs*33|1|0.15|ENSG00000035928|chr4:39308992-39308992|T/-|frameshift_variant;RFC1|p.N81Mfs*61|1|0.3|ENSG00000035928|chr4:39342434-39342434|T/-|frameshift_variant	40.5726180659479	0.6527593143185008	6				NaN	NaN	0	NaN	2724	2597	5319
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5324	18.046	NaN	8966.8	30	0	2272	0.106				-1	 	0	73	450.22641910069876	898.4382852681975	2	450.226806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2725	2597	5319
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5325	18.048	NaN	37892	30	0	8178.2	0.106	+			32758	RAQDLPLKK	9	72	356.88822861310024	1067.6428564395007	3	356.88897705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RAQDLPLKK_	ENSG00000139641|ENST00000394048|ESYT1	60.11826168202944	0.21262886028301267	6				NaN	NaN	0	NaN	2726	2597	5319
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5326	18.05	NaN	5567.9	30	0	607.89	0.034				-1	 	0	71	480.770948388598	959.527343843996	2	480.7713928222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2727	2597	5319
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5344	18.085	NaN	25388	30	0	5855.2	0.211	+			9312	EIDHHREQYE	10	75	678.3025916718425	1354.590630410485	2	678.30029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EIDHHREQYE_	CCDC57|p.A501Hfs*12|1|0.38|ENSG00000176155|chr17:82178479-82178479|C/-|frameshift_variant;ENSG00000176155|ENST00000694881|CCDC57;nc|ENSG00000176155|Q2TAC2-2|CCDC57;nc|ENSG00000176155|Q2TAC2|CCDC57	56.72105179125745	0.3956618550748046	6				NaN	NaN	0	NaN	2742	2600	5343
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5345	18.089	NaN	24481	30	0	11520	0.106	+			22067	KSKTMIFMQK	10	83	414.56260916287556	1240.6659980888267	3	414.56298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KSKTMIFMQK_	CCDC178|p.Y665Mfs*4|2|0.25|ENSG00000166960|chr18:33215635-33215635|A/-|frameshift_variant	30.568863376406313	0.6301935916953115	6				NaN	NaN	0	NaN	2743	2600	5343
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5346	18.091	NaN	15503	30	0	1519.4	0.106	+			19392	KAMTMLTIE	9	75	519.271583718363	1036.528614503526	2	519.2741088867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KAMTMLTIE_	ENSG00000101040|ENST00000471951|ZMYND8;ENST00000468376.2_1_20:45867286-45947776:-|nuORF;nc|ENSG00000101040|Q9ULU4-10|ZMYND8;nc|ENSG00000101040|Q9ULU4-11|ZMYND8;nc|ENSG00000101040|Q9ULU4-12|ZMYND8;nc|ENSG00000101040|Q9ULU4-13|ZMYND8;nc|ENSG00000101040|Q9ULU4-14|ZMYND8;nc|ENSG00000101040|Q9ULU4-15|ZMYND8;nc|ENSG00000101040|Q9ULU4-16|ZMYND8;nc|ENSG00000101040|Q9ULU4-17|ZMYND8;nc|ENSG00000101040|Q9ULU4-18|ZMYND8;nc|ENSG00000101040|Q9ULU4-19|ZMYND8;nc|ENSG00000101040|Q9ULU4-20|ZMYND8;nc|ENSG00000101040|Q9ULU4-21|ZMYND8;nc|ENSG00000101040|Q9ULU4-22|ZMYND8;nc|ENSG00000101040|Q9ULU4-5|ZMYND8;nc|ENSG00000101040|Q9ULU4-8|ZMYND8;nc|ENSG00000101040|Q9ULU4-9|ZMYND8;nc|ENSG00000101040|Q9ULU4|ZMYND8;ZMYND8|p.K635Sfs*14|1|0.17|ENSG00000101040|chr20:47246328-47246328|T/-|frameshift_variant;ZMYND8|p.S650Afs*37|1|0.3|ENSG00000101040|chr20:47246284-47246284|T/-|frameshift_variant	75.04331003522576	0.118981335847003	6				NaN	NaN	0	NaN	2744	2600	5343
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5347	18.092	NaN	35981	30	0	16736	0.106	+			14249	GSSSVAAMK	9	67	419.20957256663525	836.4045922000705	2	419.210205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GSSSVAAMK_	ENSG00000174021|ENST00000370645|GNG5;GNG5-NMI|1|fusion	134.81075121484326	0.012914550297035062	6				NaN	NaN	0	NaN	2745	2600	5343
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5348	18.094	NaN	20391	30	0	10073	0.106			+	-1	KKFHKMLK	8	72	359.2200048538763	1074.638185161829	3	359.220458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_KKFHKM(Oxidation (M))LK_	REV__CEP128|p.E717K|1|0.04|ENSG00000100629|chr14:80784957-80784957|C/T|missense_variant	30.503639358989545	0.7238069182250283	6				NaN	NaN	0	NaN	2746	2600	5343
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5349	18.096	NaN	20374	30	0	4159.8	0.032	+			30390	PVPVGDTS	8	59	386.1973852555983	770.3802175779966	2	386.19769287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PVPVGDTS_	ENSG00000081148|ENST00000193391|IMPG2;IMPG2|p.F1232Lfs*2|1|0.3|ENSG00000081148|chr3:101228814-101228814|A/-|frameshift_variant	42.47446043378293	0.6409579893742323	6				NaN	NaN	0	NaN	2747	2600	5343
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5350	18.097	NaN	19805	30	0	2963.5	0.142				-1	 	0	80	377.20441619771816	1128.5914191933546	3	377.2047119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2748	2600	5343
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5369	18.135	NaN	14858	30	0	1596.3	0.214			+	12113	GAERPLVQ	8	78	435.24510601039077	868.4756590875816	2	435.2454833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GAERPLVQ_	REV__ENST00000469080.5_1_X:47104878-47106896:+|nuORF	79.45101966838831	0.3281480470254892	6				NaN	NaN	0	NaN	2764	2603	5368
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5370	18.139	NaN	17769	30	0	5852.8	0.106			+	8415	EAQKQRQH	8	75	342.18130062789646	1023.5220724838894	3	343.18914794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EAQKQRQH_	REV__ENSG00000070159|ENST00000374541|PTPN3;REV__nc|ENSG00000070159|P26045-2|PTPN3;REV__nc|ENSG00000070159|P26045-3|PTPN3;REV__PTPN3|p.P658Afs*20|1|0.15|ENSG00000070159|chr9:109391544-109391545|-/T|frameshift_variant	33.51558372728122	0.7005509609380386	6				NaN	NaN	0	NaN	2765	2603	5368
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5371	18.141	NaN	35741	30	0	6840.3	0.106	+			32759	RAQDLPLKK	9	83	534.8294304260259	1067.6443079188516	2	534.8301391601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RAQDLPLKK_	ENSG00000139641|ENST00000394048|ESYT1	114.8945686534367	0.024290463251177924	6				NaN	NaN	0	NaN	2766	2603	5368
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5372	18.142	NaN	36464	30	0	6391.6	0.106	+			1863	AILDKTTNK	9	80	502.29261141431914	NaN	0	502.29278564453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AILDKTTNK_	ENSG00000076067|ENST00000262031|RBMS2;ENSG00000153250|ENST00000348849|RBMS1;nc|ENSG00000153250|P29558-2|RBMS1	156.16072019525166	0.007406058789104629	6				NaN	NaN	0	NaN	2767	2603	5368
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5373	18.144	NaN	12780	30	0	1310.3	0.106			+	45258	TVQFKEGKH	9	84	537.2910079621582	1072.5674629911164	2	538.8010864257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TVQFKEGKH_	REV__ENSG00000112276|ENST00000314641|BVES	31.634271133179894	0.507608568980346	6				NaN	NaN	0	NaN	2768	2603	5368
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5374	18.146	NaN	59797	30	0	10388	0.034			+	13839	GQSSYVASK	9	83	463.7318915410311	925.4492301488622	2	463.7322998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GQSSYVASK_	REV__ENSG00000163913|ENST00000348417|IFT122;REV__nc|ENSG00000163913|Q9HBG6-5|IFT122;REV__nc|ENSG00000163913|Q9HBG6-8|IFT122	107.00750918261382	0.032051501805654005	6				NaN	NaN	0	NaN	2769	2603	5368
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5375	18.147	NaN	8150	30	0	1875.6	0.143			+	-1	ATSCVLFALV	10	52	360.86472042910594	NaN	0	360.86468505859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_ATSC(Carbamidomethyl (C))VLFALV_	REV__ENST00000381844.8_1_2:9725196-9725247:-|nuORF	30.317721548370564	0.4006274431774794	6				NaN	NaN	0	NaN	2770	2603	5368
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5393	18.184	NaN	583870	30	0	222030	0.144	+			4078	ATDKSFVEK	9	112	512.7686087769544	1023.5226646207087	2	512.7689208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATDKSFVEK_	ENSG00000100345|ENST00000216181|MYH9;ENSG00000105357|ENST00000642316|MYH14;ENSG00000133392|ENST00000300036|MYH11;MYH14|p.L1950Sfs*14|1|0.34|ENSG00000105357|chr19:50309646-50309646|C/-|frameshift_variant;MYH14|p.M997*|1|0.19|ENSG00000105357|chr19:50271483-50271483|A/-|frameshift_variant;MYH14|p.R929Gfs*44|1|0.38|ENSG00000105357|chr19:50268237-50268237|G/-|frameshift_variant;MYH9|p.I784*|1|0.07|ENSG00000100345|chr22:36304036-36304036|G/-|frameshift_variant;nc|ENSG00000100345|P35579-2|MYH9;nc|ENSG00000105357|Q7Z406-4|MYH14;nc|ENSG00000105357|Q7Z406-5|MYH14;nc|ENSG00000105357|Q7Z406-6|MYH14;nc|ENSG00000105357|Q7Z406|MYH14;nc|ENSG00000133392|P35749-2|MYH11;nc|ENSG00000133392|P35749-3|MYH11;nc|ENSG00000133392|P35749-4|MYH11	164.45504665044191	0.003713414289755139	6				NaN	NaN	0	NaN	2785	2606	5392
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5394	18.187	NaN	285540	30	0	75308	0.106	+			4079	ATDKSFVEK	9	124	342.18130062789646	1023.5220724838894	3	342.1817626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATDKSFVEK_	ENSG00000100345|ENST00000216181|MYH9;ENSG00000105357|ENST00000642316|MYH14;ENSG00000133392|ENST00000300036|MYH11;MYH14|p.L1950Sfs*14|1|0.34|ENSG00000105357|chr19:50309646-50309646|C/-|frameshift_variant;MYH14|p.M997*|1|0.19|ENSG00000105357|chr19:50271483-50271483|A/-|frameshift_variant;MYH14|p.R929Gfs*44|1|0.38|ENSG00000105357|chr19:50268237-50268237|G/-|frameshift_variant;MYH9|p.I784*|1|0.07|ENSG00000100345|chr22:36304036-36304036|G/-|frameshift_variant;nc|ENSG00000100345|P35579-2|MYH9;nc|ENSG00000105357|Q7Z406-4|MYH14;nc|ENSG00000105357|Q7Z406-5|MYH14;nc|ENSG00000105357|Q7Z406-6|MYH14;nc|ENSG00000105357|Q7Z406|MYH14;nc|ENSG00000133392|P35749-2|MYH11;nc|ENSG00000133392|P35749-3|MYH11;nc|ENSG00000133392|P35749-4|MYH11	65.15724298150197	0.17062369902793603	6				NaN	NaN	0	NaN	2786	2606	5392
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5395	18.189	NaN	80283	30	0	25637	0.106	+			44048	TPQFQLRPS	9	83	537.2910079621582	1072.5674629911164	2	537.2923583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TPQFQLRPS_	ENSG00000203786|ENST00000606109|KPRP;KPRP|p.P340Hfs*31|1|0.22|ENSG00000203786|chr1:152760603-152760603|C/-|frameshift_variant	90.60085204095205	0.06317133949006545	6				NaN	NaN	0	NaN	2787	2606	5392
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5396	18.191	NaN	8178.4	30	0	1403.4	0.106	+			3947	ATATGARKFLI	11	64	383.5640226607932	1147.6702385825797	3	383.5642395019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATATGARKFLI_	ENSG00000160282|ENST00000397746|FTCD;nc|ENSG00000160282|O95954-2|FTCD;nc|ENSG00000160282|O95954-3|FTCD	51.52775601994872	0.4002081502334604	6				NaN	NaN	0	NaN	2788	2606	5392
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5397	18.192	NaN	13762	30	0	2115.5	0.106	+			1547	AGEPPRPK	8	75	426.2397498541523	850.4649467751046	2	426.24005126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AGEPPRPK_	ENST00000566159.1_1_16:1364579-1364975:+|nuORF	37.028477286268924	0.6747514403204248	6				NaN	NaN	0	NaN	2789	2606	5392
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5398	18.194	NaN	5756.2	30	0	1505.6	0.106				-1	 	0	48	335.19697388067834	1002.569092242235	3	335.1975402832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2790	2606	5392
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5399	18.196	NaN	4648.2	30	0	956.19	0.034	+			23157	KVYGPGVAK	9	64	459.7735655228923	917.5325781125846	2	459.7736511230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KVYGPGVAK_	ENSG00000196924|ENST00000369850|FLNA;FLNA|p.A1026Lfs*20|1|0.42|ENSG00000196924|chrX:154361439-154361439|C/-|frameshift_variant;FLNA|p.G2237Efs*109|1|0.28|ENSG00000196924|chrX:154352240-154352240|C/-|frameshift_variant;FLNA|p.Q1716Sfs*23|2|0.38|ENSG00000196924|chrX:154354896-154354896|G/-|frameshift_variant;FLNA|p.R2520Vfs*16|1|0.7|ENSG00000196924|chrX:154349560-154349560|G/-|frameshift_variant;nc|ENSG00000196924|P21333-2|FLNA	66.42927471994793	0.16001998865088202	6				NaN	NaN	0	NaN	2791	2606	5392
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5419	18.232	NaN	43608	30	0	12786	0.214	+			35607	SCCPVGCAK	9	95	491.2000774398176	980.3856019464353	2	491.200927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_SCC(Carbamidomethyl (C))PVGC(Carbamidomethyl (C))AK_	CON__P67983;ENSG00000125144|ENST00000379811|MT1G;ENSG00000125148|ENST00000245185|MT2A;ENSG00000169688|ENST00000334346|MT1B;ENSG00000187193|ENST00000394485|MT1X;ENSG00000205364|ENST00000379818|MT1M;ENST00000330439.6_1_16:56660742-56660880:+|nuORF;ENST00000562017.1_1_16:56643131-56643263:+|nuORF;ENST00000563985.1_1_16:56642884-56643263:+|nuORF;ENST00000567300.1_1_16:56642646-56643263:+|nuORF;nc|ENSG00000125144|P13640-2|MT1G;nc|ENSG00000169715|P04732|MT1E	122.1759843771914	0.019882474861609503	6				NaN	NaN	0	NaN	2808	2609	5418
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5420	18.236	NaN	12671	30	0	1423.2	0.106	+			42741	TDKSFVEK	8	79	477.24991405411623	952.4852751750325	2	477.2501525878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TDKSFVEK_	ENSG00000100345|ENST00000216181|MYH9;ENSG00000105357|ENST00000642316|MYH14;ENSG00000133392|ENST00000300036|MYH11;MYH14|p.L1950Sfs*14|1|0.34|ENSG00000105357|chr19:50309646-50309646|C/-|frameshift_variant;MYH14|p.M997*|1|0.19|ENSG00000105357|chr19:50271483-50271483|A/-|frameshift_variant;MYH14|p.R929Gfs*44|1|0.38|ENSG00000105357|chr19:50268237-50268237|G/-|frameshift_variant;MYH9|p.I784*|1|0.07|ENSG00000100345|chr22:36304036-36304036|G/-|frameshift_variant;nc|ENSG00000100345|P35579-2|MYH9;nc|ENSG00000105357|Q7Z406-4|MYH14;nc|ENSG00000105357|Q7Z406-5|MYH14;nc|ENSG00000105357|Q7Z406-6|MYH14;nc|ENSG00000105357|Q7Z406|MYH14;nc|ENSG00000133392|P35749-2|MYH11;nc|ENSG00000133392|P35749-3|MYH11;nc|ENSG00000133392|P35749-4|MYH11	132.757866228626	0.23138309008778796	6				NaN	NaN	0	NaN	2809	2609	5418
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5421	18.238	NaN	40678	30	0	23394	0.106	+			30473	QAEEKAHAF	9	84	515.7499743672342	1029.4853958012684	2	515.7509155273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QAEEKAHAF_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	127.46168284122857	0.016682644177004526	6				NaN	NaN	0	NaN	2810	2609	5418
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5422	18.24	NaN	7019.7	30	0	1421.5	0.106				-1	 	0	61	426.72598891602433	851.4374248988487	2	426.72637939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2811	2609	5418
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5423	18.241	NaN	8176.3	30	0	1386.3	0.106				-1	 	0	70	424.18762161361843	846.3606902940369	2	424.1880798339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2812	2609	5418
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5424	18.243	NaN	12697	30	0	2206.7	0.106	+			13820	GQPQRILSS	9	73	493.27391795009265	984.5332829669853	2	493.2742919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GQPQRILSS_	ENST00000369904.7_1_1:109822389-109822509:-|nuORF	39.252832667884924	0.4290233611298554	6				NaN	NaN	0	NaN	2813	2609	5418
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5425	18.245	NaN	15017	30	0	1760.4	0.033				-1	 	0	82	435.760890485046	869.507228036892	2	435.7613220214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2814	2609	5418
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5443	18.281	NaN	124310	30	0	30134	0.214				-1	 	0	86	369.8922843689761	1106.6550237071283	3	369.8926086425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2829	2612	5442
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5444	18.285	NaN	49136	30	0	16695	0.106				-1	 	0	105	456.7660345709924	911.5175162087849	2	456.7664794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2830	2612	5442
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5445	18.287	NaN	22636	30	0	1893.2	0.106	+			20258	KEMTALRRK	9	86	378.2252907428304	NaN	0	378.2254333496094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEMTALRRK_	ENSG00000156983|ENST00000383829|BRPF1;nc|ENSG00000156983|P55201-3|BRPF1;nc|ENSG00000156983|P55201-4|BRPF1;nc|ENSG00000156983|P55201|BRPF1	91.26522074875469	0.03904588892501484	6				NaN	NaN	0	NaN	2831	2612	5442
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5446	18.289	NaN	109230	30	0	16701	0.106				-1	 	0	95	572.326952331693	1142.6393517301858	2	572.327880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2832	2612	5442
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5447	18.29	NaN	10019	30	0	1324.9	0.106	+			35820	SEAVANGGP	9	68	401.1902513660456	800.3659497988912	2	401.1904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SEAVANGGP_	ENST00000322177.5_1_15:75247374-75247581:-|nuORF	26.69291269510374	0.5537881896960711	6				NaN	NaN	0	NaN	2833	2612	5442
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5448	18.292	NaN	43476	30	0	22519	0.036				-1	 	0	82	350.2129227544224	1047.616938863467	3	350.21337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2834	2612	5442
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5449	18.293	NaN	7717.8	30	0	1601.6	0.138	+			37114	SISSPQPGK	9	61	450.74194698443597	899.469341035672	2	450.7425842285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SISSPQPGK_	ENSG00000136279|ENST00000448521|DBNL;nc|ENSG00000136279|Q9UJU6-2|DBNL;nc|ENSG00000136279|Q9UJU6-3|DBNL;nc|ENSG00000136279|Q9UJU6-4|DBNL;nc|ENSG00000136279|Q9UJU6-5|DBNL;nc|ENSG00000136279|Q9UJU6-6|DBNL	69.6276240434122	0.14239879520340665	6				NaN	NaN	0	NaN	2835	2612	5442
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5468	18.33	NaN	16533	30	0	4218.8	0.214	+			4772	ATNDSVVADK	10	86	510.2532552932405	1018.491957653281	2	510.25384521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATNDSVVADK_	ENSG00000205220|ENST00000358514|PSMB10;ENST00000575556.1_1_16:67970119-67970555:-|nuORF	163.44553107872517	0.005769435045406411	6				NaN	NaN	0	NaN	2851	2615	5467
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5469	18.334	NaN	17127	30	0	2193.2	0.106			+	32245	QTILQALRL	9	86	528.3315016397642	1054.6484503463282	2	528.3324584960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QTILQALRL_	REV__ENSG00000136699|ENST00000680298|SMPD4;REV__ENST00000482171.5_1_2:130910130-130912221:-|nuORF;REV__nc|ENSG00000136699|Q9NXE4-10|SMPD4;REV__nc|ENSG00000136699|Q9NXE4-2|SMPD4;REV__nc|ENSG00000136699|Q9NXE4-3|SMPD4;REV__nc|ENSG00000136699|Q9NXE4-4|SMPD4;REV__nc|ENSG00000136699|Q9NXE4-5|SMPD4;REV__nc|ENSG00000136699|Q9NXE4-6|SMPD4;REV__nc|ENSG00000136699|Q9NXE4-7|SMPD4;REV__nc|ENSG00000136699|Q9NXE4-8|SMPD4;REV__nc|ENSG00000136699|Q9NXE4-9|SMPD4;REV__nc|ENSG00000136699|Q9NXE4|SMPD4	52.936696900407355	0.27249468807391813	6				NaN	NaN	0	NaN	2852	2615	5467
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5470	18.336	NaN	19762	30	0	5294.4	0.106	+			5177	ATTGKILEK	9	86	480.78914073504274	959.5637285368855	2	480.78961181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATTGKILEK_	ENSG00000115827|ENST00000375255|DCAF17;ENST00000468592.5_1_2:172300063-172325523:+|nuORF;ENST00000480855.1_1_2:172299988-172306494:+|nuORF	89.02883481214508	0.06760336634167786	6				NaN	NaN	0	NaN	2853	2615	5467
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5471	18.338	NaN	4212.9	30	0	789.03	0.106			+	9431	EKKMMEKRV	9	67	597.820943320812	1193.627333708424	2	597.8219604492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_EKKMM(Oxidation (M))EKRV_	REV__tr|U7STH1|U7STH1_FUSNUNADHoxidaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01482PE=3SV=1	56.43379154798735	0.2433427591689151	6				NaN	NaN	0	NaN	2854	2615	5467
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5472	18.34	NaN	13063	30	0	1664.3	0.106				-1	 	0	79	414.69535763553375	827.3761623378675	2	414.6957702636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2855	2615	5467
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5473	18.341	NaN	6621	30	0	2256.3	0.106	+			48106	VSTTLTIK	8	72	431.7657525430915	861.516952152983	2	431.7662048339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VSTTLTIK_	ENSG00000177398|ENST00000408910|UMODL1;nc|ENSG00000177398|Q5DID0-2|UMODL1;nc|ENSG00000177398|Q5DID0-3|UMODL1;nc|ENSG00000177398|Q5DID0-4|UMODL1	25.450171626174864	0.7628259754767981	6				NaN	NaN	0	NaN	2856	2615	5467
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5474	18.343	NaN	37013	30	0	4376.7	0.035	+			9145	EGMHRGSQN	9	105	516.2203420500244	1030.4261311668488	2	516.2210083007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_EGM(Oxidation (M))HRGSQN_	ENST00000373479.8_1_6:37321761-37321914:+|nuORF;ENST00000487950.1_1_6:37321854-37328319:+|nuORF	77.31757898189308	0.1091473830098891	6				NaN	NaN	0	NaN	2857	2615	5467
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5492	18.381	NaN	16490	30	0	3635.5	0.214				-1	 	0	75	479.28929744685377	956.5640419605076	2	479.2897033691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2872	2618	5491
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5493	18.384	NaN	15000	30	0	2087.4	0.106			+	15770	GVSWAKAAPAA	11	98	514.7806920442904	1027.5468311553807	2	515.803955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GVSWAKAAPAA_	REV__ENST00000495703.5_1_1:45806075-45806195:+|nuORF	37.81151784470057	0.5878881669006212	6				NaN	NaN	0	NaN	2873	2618	5491
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5494	18.386	NaN	13471	30	0	2902.7	0.106			+	43743	TLCLANAIE	9	74	502.7586257267265	1003.502698520253	2	502.7594299316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_TLC(Carbamidomethyl (C))LANAIE_	REV__ENSG00000106006|ENST00000222728|HOXA6;REV__ENSG00000197757|ENST00000243108|HOXC6;REV__nc|ENSG00000197757|P09630-2|HOXC6	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	2874	2618	5491
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5495	18.388	NaN	70652	30	0	12838	0.106	+			45409	TVVGKEKLLE	10	100	372.56058896436946	1114.6599374933085	3	372.56085205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TVVGKEKLLE_	tr|U7SJJ8|U7SJJ8_FUSNUDNA3'-5'helicaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02077PE=3SV=1	43.650786325866115	0.5155049133366767	6				NaN	NaN	0	NaN	2875	2618	5491
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5496	18.39	NaN	13094	30	0	1640.1	0.106	+			19351	KAKRERLQS	9	81	558.3366287382036	1114.658704543207	2	558.337646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KAKRERLQS_	ENSG00000100034|ENST00000263212|PPM1F;nc|ENSG00000100034|P49593-2|PPM1F	136.26810882979174	0.012230845423532208	6				NaN	NaN	0	NaN	2876	2618	5491
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5497	18.392	NaN	11750	30	0	3928.4	0.036	+			24883	LKIGLQAKR	9	76	342.89752537349915	NaN	0	342.8975830078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LKIGLQAKR_	ASH1L|p.H1793Ifs*7|1|0.13|ENSG00000116539|chr1:155438778-155438778|G/-|frameshift_variant;ASH1L|p.I970Lfs*9|1|0.2|ENSG00000116539|chr1:155479962-155479962|T/-|frameshift_variant;ASH1L|p.K1222Rfs*11|4|0.27|ENSG00000116539|chr1:155479205-155479205|T/-|frameshift_variant;ASH1L|p.K1533Sfs*17|1|0.25|ENSG00000116539|chr1:155478272-155478272|T/-|frameshift_variant;ASH1L|p.K2377Nfs*5|1|0.28|ENSG00000116539|chr1:155354570-155354570|T/-|frameshift_variant;ASH1L|p.N1822Tfs*2|1|0.33|ENSG00000116539|chr1:155438690-155438690|T/-|frameshift_variant;ASH1L|p.R712Efs*23|3|0.35|ENSG00000116539|chr1:155480736-155480736|T/-|frameshift_variant;ASH1L|p.S2309Ifs*11|1|0.64|ENSG00000116539|chr1:155357635-155357636|-/T|frameshift_variant;ENSG00000116539|ENST00000392403|ASH1L;nc|ENSG00000116539|Q9NR48|ASH1L	29.170058357718403	0.3302935627494407	6				NaN	NaN	0	NaN	2877	2618	5491
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5498	18.392	NaN	2820.4	30	0	322.06	0.139	+			49476	VVYQGGTSR	9	58	483.75307191447564	965.4915908957513	2	483.75341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VVYQGGTSR_	ENSG00000127831|ENST00000248444|VIL1	47.657333605630114	0.33044192980041115	6				NaN	NaN	0	NaN	2878	2618	5491
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5517	18.432	NaN	75759	30	0	14137	0.185			+	37189	SIYTSTTTIK	10	84	372.20444995868075	1113.5915204762423	3	372.20489501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIYTSTTTIK_	REV__ENSG00000156650|ENST00000287239|KAT6B;REV__KAT6B|p.K962Sfs*2|1|0.13|ENSG00000156650|chr10:75021146-75021146|A/-|frameshift_variant;REV__KAT6B|p.L1460*|1|0.36|ENSG00000156650|chr10:75029198-75029198|T/-|frameshift_variant;REV__KAT6B|p.R1133Gfs*12|1|0.07|ENSG00000156650|chr10:75024979-75024979|A/-|frameshift_variant;REV__nc|ENSG00000156650|Q8WYB5-2|KAT6B	49.44154591367651	0.46214596422418036	6				NaN	NaN	0	NaN	2894	2621	5516
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5518	18.435	NaN	7270.6	30	0	771.24	0.106	+			41395	SVMNTSNPK	9	76	489.2385282169996	976.4625035007992	2	489.23931884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVMNTSNPK_	ATP9B|p.N368Ifs*13|1|0.37|ENSG00000166377|chr18:79214029-79214029|A/-|frameshift_variant;ATP9B|p.N368Kfs*2|1|0.4|ENSG00000166377|chr18:79214028-79214029|-/A|frameshift_variant;ENSG00000166377|ENST00000426216|ATP9B;ENST00000585674.1_1_18:76966984-77037243:+|nuORF;nc|ENSG00000166377|O43861-2|ATP9B	93.1432384553994	0.056003526918089595	6				NaN	NaN	0	NaN	2895	2621	5516
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5519	18.437	NaN	14110	30	0	5319.4	0.106	+			24463	LGFSSLGEIQL	11	52	388.54797888822577	1162.6221072648773	3	388.54876708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LGFSSLGEIQL_	ENSG00000198965|ENST00000641067|OR10R2;nc|ENSG00000198965|Q8NGX6|OR10R2	46.45678178249821	0.46959456050452836	6				NaN	NaN	0	NaN	2896	2621	5516
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5520	18.439	NaN	4692.2	30	0	1207.2	0.106			+	2884	ASASRRRAVI	10	73	543.8287137093472	1085.6428744854943	2	543.829833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASASRRRAVI_	REV__ENSG00000113763|ENST00000329542|UNC5A;REV__nc|ENSG00000113763|Q6ZN44-2|UNC5A;REV__nc|ENSG00000113763|Q6ZN44-3|UNC5A;REV__UNC5A|p.G634Dfs*3|1|0.33|ENSG00000113763|chr5:176878270-176878270|G/-|frameshift_variant;REV__UNC5A|p.L403Wfs*40|1|0.36|ENSG00000113763|chr5:176874391-176874391|C/-|frameshift_variant;REV__UNC5A|p.P467Qfs*22|1|0.37|ENSG00000113763|chr5:176877208-176877208|C/-|frameshift_variant	37.81151784470057	0.569310847604193	6				NaN	NaN	0	NaN	2897	2621	5516
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5521	18.441	NaN	9905.2	30	0	1211.5	0.106	+			30324	PTRRELSL	8	69	486.28450375941435	970.5544545856287	2	486.2850036621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PTRRELSL_	ENSG00000244486|ENST00000622235|SCARF2	37.15910966729921	0.6739408393984688	6				NaN	NaN	0	NaN	2898	2621	5516
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5522	18.442	NaN	9816.7	30	0	4948.1	0.106				-1	CIKLQKRK	8	67	358.5593116073999	NaN	0	358.5606994628906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_C(Carbamidomethyl (C))IKLQKRK_	ENSG00000198000|ENST00000442668|NOL8;nc|ENSG00000198000|Q76FK4-2|NOL8;nc|ENSG00000198000|Q76FK4-4|NOL8;NOL8|p.D1050*|1|0.39|ENSG00000198000|chr9:92301578-92301579|-/A|frameshift_variant	42.396135135203025	1.7418937515398478	6				NaN	NaN	0	NaN	2899	2621	5516
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5523	18.444	NaN	17433	30	0	4554.3	0.035			+	24450	LGEVQVEPM	9	81	501.2539908994916	NaN	0	501.3211364746094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LGEVQVEPM_	REV__ENSG00000123415|ENST00000682136|SMUG1	79.71258880314673	0.07236858429579222	6				NaN	NaN	0	NaN	2900	2621	5516
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5541	18.482	NaN	45012	30	0	11717	0.214				-1	 	0	77	446.2296472063717	890.4447414795434	2	446.2300109863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2915	2624	5540
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5542	18.486	NaN	21183	30	0	2586.6	0.106	+			41071	SVIKNVSTK	9	85	488.29466758655826	974.5747822399165	2	488.29510498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVIKNVSTK_	ENSG00000122257|ENST00000319715|RBBP6;nc|ENSG00000122257|Q7Z6E9-2|RBBP6;nc|ENSG00000122257|Q7Z6E9-4|RBBP6;RBBP6|p.D1432Vfs*9|1|0.04|ENSG00000122257|chr16:24571360-24571361|-/TTTTCCCTTTTTC|frameshift_variant;RBBP6|p.T1475Lfs*20|1|0.3|ENSG00000122257|chr16:24571483-24571483|A/-|frameshift_variant	128.60217544463768	0.015992218256422188	6				NaN	NaN	0	NaN	2916	2624	5540
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5543	18.488	NaN	32403	30	0	5462.6	0.106	+			1272	AESGRGQVM	9	87	467.7235188282814	933.4324847233628	2	467.7239685058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AESGRGQVM_	ENSG00000008517|ENST00000525643|IL32;nc|ENSG00000008517|P24001-3|IL32;nc|ENSG00000008517|P24001-4|IL32;nc|ENSG00000008517|P24001|IL32	104.0567914643314	0.03506238181059741	6				NaN	NaN	0	NaN	2917	2624	5540
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5544	18.489	NaN	11508	30	0	2404.8	0.106	+			12491	GEEEGRATV	9	72	474.2245283257505	946.434503718301	2	474.22491455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEEEGRATV_	ENSG00000115866|ENST00000264161|DARS1;nc|ENSG00000115866|P14868-2|DARS1	85.86182877749512	0.07653218437724067	6				NaN	NaN	0	NaN	2918	2624	5540
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5545	18.491	NaN	114260	30	0	26414	0.106				-1	 	0	99	441.2631652772093	880.5117776212186	2	441.26361083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2919	2624	5540
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5546	18.493	NaN	11537	30	0	682.77	0.036			+	47573	VRIAGASLLK	10	81	343.22556981947145	NaN	0	343.2255554199219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VRIAGASLLK_	REV__PRPS1|p.T242I|1|0.5|ENSG00000147224|chrX:107647626-107647626|C/T|missense_variant	70.8162118820467	0.1459513513137803	6				NaN	NaN	0	NaN	2920	2624	5540
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5547	18.494	NaN	3077.2	30	0	357.28	0.141	+			24078	LEKERISQE	9	66	566.3033133917082	1130.5920738502164	2	566.3043212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LEKERISQE_	tr|U7SSK6|U7SSK6_FUSNUSigma-BregulationproteinRsbU(Phosphoserinephosphatase)OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01485PE=4SV=1	75.04331003522576	0.118981335847003	6				NaN	NaN	0	NaN	2921	2624	5540
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5565	18.532	NaN	28553	30	0	6642	0.214				-1	 	0	82	414.7373829189783	827.4602129047566	2	414.73779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2936	2627	5564
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5566	18.535	NaN	17610	30	0	2335	0.106	+			27138	MASRTSSEM	9	84	500.2142698903672	998.4139868475344	2	500.2151794433594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MASRTSSEM_	ENSG00000265972|ENST00000582401|TXNIP;ENST00000488537.1_1_1:145440673-145441098:+|nuORF;nc|ENSG00000265972|Q9H3M7-2|TXNIP	117.81106730687013	0.02252488733980868	6				NaN	NaN	0	NaN	2937	2627	5564
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5567	18.537	NaN	20715	30	0	15759	0.106	+			12200	GAPSKTSSL	9	56	424.22900074195263	846.4434485507053	2	424.22943115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GAPSKTSSL_	ENSG00000198752|ENST00000361246|CDC42BPB	54.776311868738084	0.25715957988447635	6				NaN	NaN	0	NaN	2938	2627	5564
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5568	18.539	NaN	14679	30	0	3023.7	0.106				-1	 	0	57	376.18999709298106	375.18272062638107	1	376.19024658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2939	2627	5564
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5569	18.541	NaN	7388.7	30	0	642.95	0.106	+			16535	HEVKKVTL	8	72	477.29191662696365	952.5692803207273	2	477.2922668457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HEVKKVTL_	ENSG00000100813|ENST00000605057|ACIN1;nc|ENSG00000100813|Q9UKV3-2|ACIN1;nc|ENSG00000100813|Q9UKV3-3|ACIN1;nc|ENSG00000100813|Q9UKV3-5|ACIN1;nc|ENSG00000100813|Q9UKV3|ACIN1	118.74307786436346	0.2363524257139583	6				NaN	NaN	0	NaN	2940	2627	5564
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5570	18.543	NaN	8902.2	30	0	1977.8	0.035	+			5174	ATTGELAANK	10	75	488.2583066714727	974.5020604097455	2	488.2586364746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATTGELAANK_	ENSG00000179222|ENST00000326587|MAGED1;ENST00000485420.5_1_X:51636757-51640983:+|nuORF;ENST00000494718.5_1_X:51637400-51640272:+|nuORF;MAGED1|p.P628Rfs*18|1|0.09|ENSG00000179222|chrX:51900215-51900215|C/-|frameshift_variant;nc|ENSG00000179222|Q9Y5V3-2|MAGED1	72.87924865735499	0.25379688738724415	6				NaN	NaN	0	NaN	2941	2627	5564
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5571	18.543	NaN	8435.3	30	0	1432.8	0.144			+	-1	DFLQMSRMI	9	76	391.51914657353234	1171.535610320797	3	391.51934814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Oxidation (M)	_DFLQM(Oxidation (M))SRM(Oxidation (M))I_	REV__ENSG00000120049|ENST00000356640|KCNIP2;REV__ENST00000355657.6_1_10:103587112-103588944:-|nuORF;REV__ENST00000472764.5_1_10:103587112-103590834:-|nuORF;REV__nc|ENSG00000120049|Q9NS61-2|KCNIP2;REV__nc|ENSG00000120049|Q9NS61-3|KCNIP2;REV__nc|ENSG00000120049|Q9NS61-4|KCNIP2;REV__nc|ENSG00000120049|Q9NS61-5|KCNIP2;REV__nc|ENSG00000120049|Q9NS61-6|KCNIP2;REV__nc|ENSG00000120049|Q9NS61-7|KCNIP2;REV__nc|ENSG00000120049|Q9NS61-8|KCNIP2	30.317721548370564	0.5199124245378496	6				NaN	NaN	0	NaN	2942	2627	5564
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5589	18.583	NaN	221240	30	0	40124	0.192	+			48597	VTQSEIAQK	9	96	502.27426706356795	1002.5339811939359	2	502.2745056152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTQSEIAQK_	ENSG00000197702|ENST00000334956|PARVA;ENST00000533345.5_1_11:12419899-12534890:+|nuORF	185.32735939749918	0.0007612398116818154	6				NaN	NaN	0	NaN	2957	2630	5588
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5590	18.586	NaN	17064	30	0	2756.6	0.106			+	41361	SVMCKITTE	9	72	534.7564108353863	1067.4982687375725	2	534.7573852539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SVMC(Carbamidomethyl (C))KITTE_	REV__ENST00000176763.9_1_5:171470328-171470631:-|nuORF	63.53385203322761	0.18415635464017938	6				NaN	NaN	0	NaN	2958	2630	5588
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5591	18.588	NaN	47070	30	0	17434	0.106	+			5127	ATSSTLVSK	9	93	447.2501348773513	892.4857168215026	2	447.2503356933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATSSTLVSK_	ENST00000332782.6_1_12:57640633-57642538:-|nuORF	132.757866228626	0.013877640931359021	6				NaN	NaN	0	NaN	2959	2630	5588
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5592	18.59	NaN	29997	30	0	7420.6	0.106	+			27915	MTVMEAVD	8	85	464.1931980519685	926.3718431707371	2	464.1934509277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Oxidation (M)	_M(Oxidation (M))TVM(Oxidation (M))EAVD_	ENSG00000100253|ENST00000216075|MIOX;nc|ENSG00000100253|Q9UGB7-2|MIOX	51.33545320467046	0.5859736979383976	6				NaN	NaN	0	NaN	2960	2630	5588
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5593	18.592	NaN	5687.9	30	0	695.86	0.106			+	47536	VQTDRLQVQ	9	71	543.7981066285142	1085.5816603238284	2	543.7992553710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VQTDRLQVQ_	REV__ENST00000337231.5_1_17:73001140-73001404:+|nuORF	65.46538089061403	0.16805504838372562	6				NaN	NaN	0	NaN	2961	2630	5588
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5594	18.593	NaN	19520	30	0	6632	0.106	+			23031	KVSVQLGK	8	81	429.77352429636034	857.5324956595207	2	429.773681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KVSVQLGK_	ENSG00000149636|ENST00000373750|DSN1;nc|ENSG00000149636|Q9H410-2|DSN1;nc|ENSG00000149636|Q9H410-3|DSN1;nc|ENSG00000149636|Q9H410-4|DSN1	66.42927471994793	0.4381325844043345	6				NaN	NaN	0	NaN	2962	2630	5588
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5595	18.595	NaN	104510	30	0	9807	0.038				-1	RPGLGLRACC	10	119	387.20010991832845	NaN	0	387.20001220703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C)	_RPGLGLRAC(Carbamidomethyl (C))C(Carbamidomethyl (C))_	ENST00000584137.5_1_17:46125753-46127990:+|nuORF	41.42661286455405	0.3598046802465243	6				NaN	NaN	0	NaN	2963	2630	5588
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5613	18.63	NaN	80401	30	0	8530.5	0.155	+			34391	RTSEIYVHR	9	90	387.5436086069882	1159.6089964211646	3	387.5439147949219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTSEIYVHR_	ENSG00000089737|ENST00000621632|DDX24;ENST00000555762.1_1_14:94517539-94521656:-|nuORF;nc|ENSG00000089737|Q9GZR7-2|DDX24	72.2432373244024	0.13108886737667413	6				NaN	NaN	0	NaN	2978	2633	5612
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5614	18.633	NaN	12827	30	0	2590	0.106	+			34392	RTSEIYVHR	9	79	580.8118128269049	1159.6090727206097	2	580.8129272460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RTSEIYVHR_	ENSG00000089737|ENST00000621632|DDX24;ENST00000555762.1_1_14:94517539-94521656:-|nuORF;nc|ENSG00000089737|Q9GZR7-2|DDX24	92.23892857375223	0.05855307001735979	6				NaN	NaN	0	NaN	2979	2633	5612
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5615	18.635	NaN	13912	30	0	3063.5	0.106	+			18675	ITAKETAYQ	9	76	512.7686087769544	1023.5226646207087	2	513.2759399414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ITAKETAYQ_	GRHL1|p.R75Efs*26|1|0.3|ENSG00000134317|chr2:9958791-9958792|-/AG|frameshift_variant	47.657333605630114	0.33044192980041115	6				NaN	NaN	0	NaN	2980	2633	5612
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5616	18.637	NaN	4982.6	30	0	970.71	0.106				-1	TALMKAAMR	9	54	342.18130062789646	1023.5220724838894	3	342.5196228027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Oxidation (M)	_TALM(Oxidation (M))KAAM(Oxidation (M))R_	ANKRD33|p.G178Vfs*7|1|0.41|ENSG00000167612|chr12:51890849-51890849|G/-|frameshift_variant;ENSG00000167612|ENST00000301190|ANKRD33;nc|ENSG00000167612|Q7Z3H0-1|ANKRD33	25.57405402267927	0.5642445186134241	6				NaN	NaN	0	NaN	2981	2633	5612
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5617	18.639	NaN	6652.2	30	0	1842.3	0.106			+	9916	EQRLRELLQ	9	65	395.5629645349073	1183.6670642049219	3	395.5631103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EQRLRELLQ_	REV__AluSc_dup33256|chr20:36047011-36047299:-|1.0450281466574736|0.0277790638852019|5.23|479.0|9|3|sense;REV__AluSx4_dup3234|chr5:70410088-70410380:-|1.4747745213637276|0.3747890471528333|1.98|478.0|11|3|sense	49.536043120802724	0.308405419312776	6				NaN	NaN	0	NaN	2982	2633	5612
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5618	18.641	NaN	31852	30	0	8994.5	0.106	+			44890	TTVVTTKSA	9	66	454.25792852206445	906.5013041109289	2	454.2584228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TTVVTTKSA_	CON__P05784	79.45101966838831	0.09992237243120712	6				NaN	NaN	0	NaN	2983	2633	5612
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5619	18.642	NaN	6382	30	0	1367.4	0.035	+			31363	QKCQDVHQ	8	61	493.2289294943667	984.4433060555334	2	493.2296142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QKCQDVHQ_	ENST00000487903.5_1_13:113536381-113537092:+|nuORF	53.351449002276354	0.5676011784961348	6				NaN	NaN	0	NaN	2984	2633	5612
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5637	18.679	NaN	84835	30	0	29935	0.214	+			14484	GTCGKSLISK	10	102	525.7838314256196	1049.5531099180391	2	525.7844848632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GTC(Carbamidomethyl (C))GKSLISK_	ENSG00000118322|ENST00000327245|ATP10B	147.73206827945663	0.008898223230177705	6				NaN	NaN	0	NaN	2999	2636	5636
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5638	18.682	NaN	29124	30	0	6028.3	0.106	+			13651	GMTGRPTRTL	10	88	363.8658180027269	1088.5756246083806	3	363.86614990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GMTGRPTRTL_	ENSG00000002549|ENST00000226299|LAP3;ENST00000503467.1_1_4:17587853-17609209:+|nuORF;nc|ENSG00000002549|P28838-2|LAP3	51.52775601994872	0.4429225830406686	6				NaN	NaN	0	NaN	3000	2636	5636
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5639	18.684	NaN	70763	30	0	26233	0.106	+			14485	GTCGKSLISK	10	101	350.8579241529336	1049.551943059001	3	350.85858154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_GTC(Carbamidomethyl (C))GKSLISK_	ENSG00000118322|ENST00000327245|ATP10B	84.81729255234993	0.1607459278640679	6				NaN	NaN	0	NaN	3001	2636	5636
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5640	18.686	NaN	4671.3	30	0	349.77	0.106			+	16100	HDGDIHAFRM	10	68	599.7749906417641	1197.5354283503282	2	599.776123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HDGDIHAFRM_	REV__ENSG00000109606|ENST00000336812|DHX15;REV__ENST00000508032.5_1_4:24529549-24538851:-|nuORF	54.776311868738084	0.41334902933431344	6				NaN	NaN	0	NaN	3002	2636	5636
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5641	18.688	NaN	16338	30	0	3890.7	0.106			+	38576	SSFRSRRK	8	73	512.2942714556641	1022.5739899781282	2	512.2951049804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSFRSRRK_	REV__ENSG00000156299|ENST00000541036|TIAM1;REV__ENST00000469412.5_1_21:32585686-32624433:-|nuORF;REV__nc|ENSG00000156299|Q13009-2|TIAM1	45.97224482568171	0.6192535143389125	6				NaN	NaN	0	NaN	3003	2636	5636
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5642	18.69	NaN	19490	30	0	2906.9	0.034	+			200	AALEQDLGK	9	71	472.75547868812475	943.4964044430495	2	472.7556457519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AALEQDLGK_	ENSG00000198483|ENST00000355594|ANKRD35	44.377184641726394	0.36891676396732553	6				NaN	NaN	0	NaN	3004	2636	5636
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5643	18.69	NaN	15083	30	0	2835.8	0.141	+			3339	ASMPDNTAAQK	11	82	567.2662992266883	1132.5180455201764	2	567.2680053710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASMPDNTAAQK_	ENSG00000100345|ENST00000216181|MYH9;ENSG00000133392|ENST00000300036|MYH11;MYH9|p.I784*|1|0.07|ENSG00000100345|chr22:36304036-36304036|G/-|frameshift_variant;nc|ENSG00000100345|P35579-2|MYH9;nc|ENSG00000133392|P35749-2|MYH11;nc|ENSG00000133392|P35749-3|MYH11;nc|ENSG00000133392|P35749-4|MYH11	156.16072019525166	6.025336435842151E-05	6				NaN	NaN	0	NaN	3005	2636	5636
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5661	18.729	NaN	21314	30	0	2608.3	0.214	+			47951	VSMGHSISK	9	87	473.24407579022176	944.4735986472435	2	473.244384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSMGHSISK_	ENSG00000186017|ENST00000452939|ZNF566;ZNF566|p.F128Lfs*25|1|0.12|ENSG00000186017|chr19:36449850-36449850|A/-|frameshift_variant;ZNF566|p.P52Q|1|0.3|ENSG00000186017|chr19:36472988-36472988|G/T|missense_variant	88.17693792209575	0.07000514020414955	6				NaN	NaN	0	NaN	3020	2639	5660
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5662	18.733	NaN	17124	30	0	3142.1	0.106	+			40578	SVAEHPLSR	9	81	498.266551072352	994.518549211504	2	498.26690673828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVAEHPLSR_	ENSG00000142207|ENST00000382751|URB1;URB1|p.R2106W|1|0.08|ENSG00000142207|chr21:32316784-32316784|G/A|missense_variant	132.757866228626	0.013877640931359021	6				NaN	NaN	0	NaN	3021	2639	5660
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5663	18.735	NaN	59481	30	0	26120	0.106	+			14447	GTATTMVSK	9	85	448.23063351979744	894.4467141063949	2	448.2303161621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTATTMVSK_	ENSG00000204217|ENST00000374580|BMPR2	141.52041321563706	0.009766778904176347	6				NaN	NaN	0	NaN	3022	2639	5660
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5664	18.737	NaN	5342.8	30	0	422.05	0.106	+			39437	STEIHITLQVT	11	65	414.56260916287556	1240.6659980888267	3	415.26043701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STEIHITLQVT_	ENSG00000261934|ENST00000573521|PCDHGA9;nc|ENSG00000261934|Q9Y5G4-2|PCDHGA9	31.068146907933308	0.6639116734509778	6				NaN	NaN	0	NaN	3023	2639	5660
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5665	18.738	NaN	4299.5	30	0	265.74	0.106	+			29628	PGCQKGRKP	9	73	485.766044834796	NaN	0	486.2340393066406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PGCQKGRKP_	ENST00000550184.5_1_12:56553125-56553233:+|nuORF	45.9519527083369	0.2345902329052062	6				NaN	NaN	0	NaN	3024	2639	5660
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5666	18.74	NaN	4485.1	30	0	515.59	0.034	+			35768	SEAADSKSL	9	66	454.2215729128066	NaN	0	454.2217102050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SEAADSKSL_	ENSG00000112297|ENST00000633556|CRYBG1;nc|ENSG00000112297|Q9Y4K1-1|CRYBG1	78.26377905018397	0.07733306720594871	6				NaN	NaN	0	NaN	3025	2639	5660
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5667	18.741	NaN	5905.4	30	0	646.5	0.141			+	21445	KNDKKKINN	9	75	551.3213526524958	1100.6281523717914	2	551.32275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KNDKKKINN_	REV__ENSG00000095777|ENST00000642920|MYO3A	74.25504064058377	0.12238981753128622	6				NaN	NaN	0	NaN	3026	2639	5660
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5686	18.777	NaN	10463	30	0	1993.2	0.214	+			39449	STEKIYIRK	9	66	379.89230511935955	NaN	0	379.892333984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STEKIYIRK_	ENSG00000120798|ENST00000333003|NR2C1;ENSG00000177463|ENST00000425241|NR2C2;ENST00000475707.5_1_3:15045421-15079667:+|nuORF;nc|ENSG00000120798|P13056-2|NR2C1;nc|ENSG00000120798|P13056-3|NR2C1;nc|ENSG00000177463|P49116-2|NR2C2;NR2C2|p.F563Lfs*10|1|0.4|ENSG00000177463|chr3:15042899-15042899|T/-|frameshift_variant	72.87924865735499	0.09578366712754152	6				NaN	NaN	0	NaN	3042	2642	5685
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5687	18.781	NaN	38416	30	0	11341	0.106	+			36515	SFDKAKLK	8	86	468.7801317454579	935.5457105577158	2	468.7791442871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SFDKAKLK_	CON__P21752;ENSG00000034510|ENST00000233143|TMSB10	162.25246889848123	0.0741621453821622	6				NaN	NaN	0	NaN	3043	2642	5685
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5688	18.783	NaN	14976	30	0	4942.4	0.106	+			22869	KVLALQARK	9	83	342.89754768776885	NaN	0	342.8975830078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KVLALQARK_	ENSG00000096063|ENST00000373825|SRPK1;ENST00000423325.6_1_6:35858793-35888866:-|nuORF;ENST00000507909.1_1_6:35888243-35888866:-|nuORF;ENST00000510290.5_1_6:35838717-35888866:-|nuORF;ENST00000513367.1_1_6:35855779-35888866:-|nuORF;SRPK1|p.I192Lfs*32|1|0.31|ENSG00000096063|chr6:35874244-35874244|T/-|frameshift_variant;SRPK1|p.I192Nfs*10|1|0.27|ENSG00000096063|chr6:35874243-35874244|-/T|frameshift_variant;SRPK1|p.N487Mfs*7|1|0.08|ENSG00000096063|chr6:35869062-35869062|T/-|frameshift_variant	35.15202426646627	0.3000918603816441	6				NaN	NaN	0	NaN	3044	2642	5685
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5689	18.785	NaN	8546.3	30	0	763.1	0.106	+			12714	GEKSVHEGAL	10	86	513.7651146006538	1025.5156762681074	2	513.7642822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEKSVHEGAL_	ENSG00000079819|ENST00000337057|EPB41L2	60.1669710687717	0.3643216362415131	6				NaN	NaN	0	NaN	3045	2642	5685
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5690	18.787	NaN	27765	30	0	8024.3	0.106	+			11559	FPKTGKSKIG	10	87	354.8816247484108	NaN	0	354.88153076171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FPKTGKSKIG_	CCDC168|p.A3265Vfs*21|1|0.06|ENSG00000175820|chr13:102740903-102740904|-/GAAGAAAAATATA|frameshift_variant;CCDC168|p.A4132Qfs*29|1|0.23|ENSG00000175820|chr13:102738304-102738304|T/-|frameshift_variant;CCDC168|p.F3005Lfs*18|2|0.31|ENSG00000175820|chr13:102741682-102741682|A/-|frameshift_variant;CCDC168|p.G4714Rfs*2|1|0.22|ENSG00000175820|chr13:102736557-102736558|-/T|frameshift_variant;CCDC168|p.G6141Lfs*25|1|0.03|ENSG00000175820|chr13:102732276-102732277|-/AGGAAAAATCACCAAACACTAG|frameshift_variant;CCDC168|p.K5937Nfs*10|1|0.37|ENSG00000175820|chr13:102732886-102732886|T/-|frameshift_variant;CCDC168|p.K6236Nfs*3|1|0.42|ENSG00000175820|chr13:102731989-102731989|T/-|frameshift_variant;CCDC168|p.L3176Ifs*8|1|0.42|ENSG00000175820|chr13:102741171-102741172|-/T|frameshift_variant;CCDC168|p.L5048Ifs*6|1|0.12|ENSG00000175820|chr13:102735555-102735556|-/T|frameshift_variant;CCDC168|p.L5234*|1|0.12|ENSG00000175820|chr13:102735001-102735001|A/-|frameshift_variant;CCDC168|p.M5025Cfs*8|1|0.29|ENSG00000175820|chr13:102735624-102735624|T/-|frameshift_variant;CCDC168|p.N2119Kfs*18|1|0.41|ENSG00000175820|chr13:102744340-102744341|-/T|frameshift_variant;CCDC168|p.T2792Dfs*27|1|0.25|ENSG00000175820|chr13:102742324-102742325|-/T|frameshift_variant;CCDC168|p.T4543Lfs*5|1|0.1|ENSG00000175820|chr13:102737070-102737070|T/-|frameshift_variant;ENSG00000175820|ENST00000322527|CCDC168	39.252832667884924	0.37128895876774715	6				NaN	NaN	0	NaN	3046	2642	5685
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5691	18.788	NaN	6729.3	30	0	716.57	0.036	+			15968	HAHVDKVTY	9	68	535.2749633789062	NaN	0	535.2749633789062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HAHVDKVTY_	ENSG00000181396|ENST00000313056|OGFOD3;nc|ENSG00000181396|Q6PK18-2|OGFOD3	71.87747018426188	0.0992163553043454	6				NaN	NaN	0	NaN	3047	2642	5685
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5692	18.789	NaN	31781	30	0	10738	0.143			+	29388	PAPHRKRQ	8	74	330.5303199616409	988.5691304851227	3	330.5308532714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PAPHRKRQ_	REV__ENST00000429149.6_1_16:70680464-70680746:+|nuORF	44.53106598305862	0.628196326904373	6				NaN	NaN	0	NaN	3048	2642	5685
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5704	18.815	NaN	6769700	30	0	2747600	0.115	+			3009	ASFDKAKLK	9	73	504.2980070371954	1006.5814611411909	2	504.2984313964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASFDKAKLK_	ENSG00000034510|ENST00000233143|TMSB10	168.25843898104137	0.0030641937004078144	6				NaN	NaN	0	NaN	3057	2645	5703
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5705	18.817	NaN	57162	30	0	13583	0.106	+			3733	ATAAVSSMK	9	82	433.2254079010932	864.4362628689864	2	433.22589111328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATAAVSSMK_	ADD3-MXI1|1|fusion;ENSG00000148700|ENST00000356080|ADD3;nc|ENSG00000148700|Q9UEY8-2|ADD3	172.24860141594272	0.002383092361811508	6				NaN	NaN	0	NaN	3058	2645	5703
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5706	18.818	NaN	37119	30	0	10407	0.106	+			40299	STSSPYVSK	9	79	478.2397719133857	954.4649908935714	2	478.2402038574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STSSPYVSK_	ENSG00000137501|ENST00000359152|SYTL2;ENST00000438197.2_1_11:85444955-85468786:-|nuORF;nc|ENSG00000137501|Q9HCH5-13|SYTL2;nc|ENSG00000137501|Q9HCH5-14|SYTL2;nc|ENSG00000137501|Q9HCH5-15|SYTL2;nc|ENSG00000137501|Q9HCH5-6|SYTL2;nc|ENSG00000137501|Q9HCH5|SYTL2;SYTL2|p.Q663Tfs*35|1|0.14|ENSG00000137501|chr11:85709344-85709345|-/T|frameshift_variant	114.8945686534367	0.024290463251177924	6				NaN	NaN	0	NaN	3059	2645	5703
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5707	18.82	NaN	16930	30	0	3982.3	0.036				-1	NSDCFPSQL	9	73	534.2277027917534	1066.4408526503066	2	534.2293701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_NSDC(Carbamidomethyl (C))FPSQL_	ENSG00000198420|ENST00000479870|TCAF1;ENST00000392900.3_1_7:143551228-143582358:-|nuORF;ENST00000414990.2_3_7:143295168-143301929:+|nuORF;nc|ENSG00000198420|Q9Y4C2-2|TCAF1	54.776311868738084	0.25715957988447635	6				NaN	NaN	0	NaN	3060	2645	5703
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5725	18.857	NaN	52038	30	0	19708	0.214			+	4935	ATQPTLYKQ	9	80	350.5257134044908	1048.5553108136723	3	350.52691650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATQPTLYKQ_	REV__ANO6|p.V892*|1|0.32|ENSG00000177119|chr12:45429248-45429248|G/-|frameshift_variant;REV__ENSG00000177119|ENST00000320560|ANO6;REV__nc|ENSG00000177119|Q4KMQ2-2|ANO6;REV__nc|ENSG00000177119|Q4KMQ2-3|ANO6;REV__nc|ENSG00000177119|Q4KMQ2-4|ANO6	65.46538089061403	0.16805504838372562	6				NaN	NaN	0	NaN	3075	2648	5724
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5726	18.86	NaN	15177	30	0	3514.2	0.106	+			37012	SIQHPLIKK	9	75	355.22566802329135	NaN	0	355.22564697265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SIQHPLIKK_	ENSG00000151835|ENST00000382292|SACS;nc|ENSG00000151835|Q9NZJ4-2|SACS;SACS|p.A1848Qfs*2|1|0.1|ENSG00000151835|chr13:23338334-23338334|C/-|frameshift_variant;SACS|p.I3485Lfs*10|1|0.24|ENSG00000151835|chr13:23333423-23333423|T/-|frameshift_variant;SACS|p.K2931Nfs*22|1|0.23|ENSG00000151835|chr13:23335083-23335083|T/-|frameshift_variant;SACS|p.L2871Ffs*29|1|0.26|ENSG00000151835|chr13:23335263-23335264|-/A|frameshift_variant;SACS|p.L3102*|1|0.33|ENSG00000151835|chr13:23334571-23334571|A/-|frameshift_variant;SACS|p.P2063Sfs*7|1|0.36|ENSG00000151835|chr13:23337689-23337690|-/A|frameshift_variant;SACS|p.S2058Ffs*2|1|0.3|ENSG00000151835|chr13:23337703-23337704|-/A|frameshift_variant;SACS|p.S2058Lfs*19|1|0.1|ENSG00000151835|chr13:23337704-23337704|A/-|frameshift_variant;SACS|p.S4423Ffs*42|1|0.18|ENSG00000151835|chr13:23330610-23330611|-/G|frameshift_variant	33.921630207806714	0.3063038642147651	6				NaN	NaN	0	NaN	3076	2648	5724
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5727	18.862	NaN	10027	30	0	799.52	0.106	+			47696	VSELRMGPR	9	80	522.7831643528125	1043.551775772425	2	522.7848510742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSELRMGPR_	ENST00000557080.5_2_12:56325996-56329147:+|nuORF	90.36981228632155	0.0638227155548745	6				NaN	NaN	0	NaN	3077	2648	5724
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5728	18.864	NaN	9215.5	30	0	2498.7	0.106			+	31470	QKWTPEKL	8	70	515.288720891196	NaN	0	515.288818359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QKWTPEKL_	REV__ENSG00000103429|ENST00000261658|BFAR;REV__nc|ENSG00000103429|Q9NZS9-2|BFAR	74.25504064058377	1.7418937515398478	6				NaN	NaN	0	NaN	3078	2648	5724
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5729	18.866	NaN	4971.6	30	0	740.43	0.106	+			27262	MEVANFYY	8	66	547.7278517664239	1093.4411505996477	2	547.7289428710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))M(Oxidation (M))EVANFYY_	ENSG00000172216|ENST00000303004|CEBPB;nc|ENSG00000172216|P17676-2|CEBPB	62.97842346883844	0.4722955155785405	6				NaN	NaN	0	NaN	3079	2648	5724
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5730	18.868	NaN	9221.8	30	0	1178.5	0.035	+			42283	TADPSHQTM	9	75	494.2129391271319	986.4113253210638	2	494.2140197753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TADPSHQTM_	ENSG00000196141|ENST00000409140|SPATS2L;nc|ENSG00000196141|Q9NUQ6-2|SPATS2L;nc|ENSG00000196141|Q9NUQ6-3|SPATS2L;nc|ENSG00000196141|Q9NUQ6-4|SPATS2L	80.45461616416974	0.09558281504443908	6				NaN	NaN	0	NaN	3080	2648	5724
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5731	18.868	NaN	20684	30	0	3846.3	0.139	+			47687	VSEAAADVGL	10	85	466.2405641338255	NaN	0	466.24017333984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VSEAAADVGL_	ENSG00000127586|ENST00000262315|CHTF18;ENST00000471202.5_1_16:838684-840117:+|nuORF;ENST00000479976.5_1_16:838624-840569:+|nuORF;nc|ENSG00000127586|Q8WVB6-2|CHTF18	56.72105179125745	0.2610545891966633	6				NaN	NaN	0	NaN	3081	2648	5724
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5749	18.908	NaN	47540	30	0	5675.7	0.174	+			20202	KELEKTYSA	9	93	534.7815770042364	1067.5486010752727	2	534.7825317382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KELEKTYSA_	ENSG00000160789|ENST00000368300|LMNA;ENST00000496738.5_1_1:156104631-156105741:+|nuORF;nc|ENSG00000160789|P02545-2|LMNA;nc|ENSG00000160789|P02545-3|LMNA;nc|ENSG00000160789|P02545-4|LMNA;nc|ENSG00000160789|P02545-5|LMNA;nc|ENSG00000160789|P02545-6|LMNA	104.01359247289065	0.03510646158778409	6				NaN	NaN	0	NaN	3096	2651	5748
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5750	18.911	NaN	30532	30	0	10847	0.106			+	3932	ATASTTLLTGL	11	58	350.2009479555679	1047.5810144669038	3	350.201416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATASTTLLTGL_	REV__TRIM3|p.A314T|1|0.46|ENSG00000110171|chr11:6456786-6456786|C/T|missense_variant	30.568863376406313	0.6691487505135859	6				NaN	NaN	0	NaN	3097	2651	5748
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5751	18.913	NaN	9013.9	30	0	2316.9	0.106	+			40098	STNSPVGVSK	10	68	488.25864858849724	974.5027442437945	2	488.2586364746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STNSPVGVSK_	ENSG00000165671|ENST00000439151|NSD1;nc|ENSG00000165671|Q96L73-2|NSD1;nc|ENSG00000165671|Q96L73-3|NSD1;NSD1|p.K1753Sfs*10|1|0.17|ENSG00000165671|chr5:177267669-177267669|A/-|frameshift_variant	84.81729255234993	0.1607459278640679	6				NaN	NaN	0	NaN	3098	2651	5748
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5752	18.915	NaN	13063	30	0	1326.3	0.106			+	1209	AEQKKKQAE	9	84	530.2924782095665	1058.570403485933	2	530.2935180664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEQKKKQAE_	REV__ENSG00000139746|ENST00000438737|RBM26;REV__nc|ENSG00000139746|Q5T8P6-2|RBM26;REV__nc|ENSG00000139746|Q5T8P6-3|RBM26;REV__nc|ENSG00000139746|Q5T8P6-4|RBM26;REV__nc|ENSG00000139746|Q5T8P6-5|RBM26;REV__RBM26|p.N783Ifs*5|1|0.11|ENSG00000139746|chr13:79342743-79342743|T/-|frameshift_variant	88.17693792209575	0.07000514020414955	6				NaN	NaN	0	NaN	3099	2651	5748
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5753	18.916	NaN	6840.9	30	0	2686	0.106			+	24190	LEQEQPGVQL	10	59	380.8676962409461	1139.5812593230382	3	380.8679504394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LEQEQPGVQL_	REV__ENSG00000061273|ENST00000080059|HDAC7;REV__ENST00000425451.2_1_12:48189548-48213588:-|nuORF;REV__HDAC7|p.M769Wfs*12|1|0.42|ENSG00000061273|chr12:47787744-47787744|G/-|frameshift_variant;REV__nc|ENSG00000061273|Q8WUI4-3|HDAC7;REV__nc|ENSG00000061273|Q8WUI4-4|HDAC7;REV__nc|ENSG00000061273|Q8WUI4-6|HDAC7;REV__nc|ENSG00000061273|Q8WUI4-7|HDAC7;REV__nc|ENSG00000061273|Q8WUI4-8|HDAC7;REV__nc|ENSG00000061273|Q8WUI4|HDAC7	31.529811441608018	0.6223461015008678	6				NaN	NaN	0	NaN	3100	2651	5748
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5754	18.918	NaN	32792	30	0	6293.6	0.106				-1	 	0	83	466.26331040006306	930.5120678669261	2	466.2635498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3101	2651	5748
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5755	18.92	NaN	2842.3	30	0	274.2	0.034	+			13217	GIGPVPVISGA	11	66	483.7843017578125	NaN	0	483.7843017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GIGPVPVISGA_	ACAA2|p.A299V|1|0.28|ENSG00000167315|chr18:49787349-49787349|G/A|missense_variant	51.33545320467046	0.3057270075054376	6				NaN	NaN	0	NaN	3102	2651	5748
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5773	18.956	NaN	51554	30	0	7831.4	0.209				-1	 	0	83	451.73191702050735	901.4492811078147	2	451.7323303222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3117	2654	5772
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5774	18.96	NaN	10351	30	0	1135	0.106	+			25577	LQESQIQYVP	10	67	402.21195686332885	1203.6140411901865	3	402.2126159667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LQESQIQYVP_	ENSG00000198026|ENST00000322927|ZNF335;nc|ENSG00000198026|Q9H4Z2-2|ZNF335;ZNF335|p.A1303Gfs*39|1|0.35|ENSG00000198026|chr20:45949073-45949074|AG/-|frameshift_variant	30.317721548370564	0.6322445173429027	6				NaN	NaN	0	NaN	3118	2654	5772
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5775	18.962	NaN	7722.5	30	0	662.9	0.106	+			9661	ELSRAVSKLE	10	80	566.3217324553437	1130.6289119774874	2	566.3224487304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ELSRAVSKLE_	ENSG00000160299|ENST00000359568|PCNT;nc|ENSG00000160299|O95613-2|PCNT	59.93077597824379	0.36646980200755325	6				NaN	NaN	0	NaN	3119	2654	5772
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5776	18.964	NaN	22777	30	0	3203.9	0.106				-1	 	0	90	544.7763459267949	1087.5381389203897	2	544.77734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3120	2654	5772
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5777	18.965	NaN	39122	30	0	5580.4	0.106				-1	 	0	96	362.2323137048537	1083.6751117147612	3	362.232666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3121	2654	5772
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5778	18.967	NaN	6609.2	30	0	630.85	0.034	+			19524	KAVNPGRSL	9	63	471.27874467171114	940.5429364102223	2	471.7774353027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KAVNPGRSL_	ENSG00000103429|ENST00000261658|BFAR;nc|ENSG00000103429|Q9NZS9-2|BFAR	36.446750945000026	0.4619375763483977	6				NaN	NaN	0	NaN	3122	2654	5772
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5779	18.968	NaN	3134.8	30	0	415.13	0.138			+	18460	ISEKRIGA	8	62	437.26067233194544	872.5067917306909	2	437.2611083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ISEKRIGA_	REV__ENST00000477801.1_1_1:153363297-153363519:-|nuORF	38.80614096846853	0.6637206697844082	6				NaN	NaN	0	NaN	3123	2654	5772
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5797	19.007	NaN	11759	30	0	6659.5	0.214	+			46662	VGFIDYIVHL	10	56	392.5530091770491	1174.6371981313473	3	392.55322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VGFIDYIVHL_	PDE4A|p.P652L|1|0.39|ENSG00000065989|chr19:10466915-10466915|C/T|missense_variant	36.446750945000026	0.5818864909973037	6				NaN	NaN	0	NaN	3138	2657	5796
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5798	19.011	NaN	6850.4	30	0	1067.1	0.106	+			40002	STMSACASTAR	11	76	571.749378764768	1141.484204596336	2	571.7504272460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_STMSAC(Carbamidomethyl (C))ASTAR_	ENST00000566749.5_1_16:30094754-30094823:+|nuORF	167.93327368760816	3.3692101381100775E-05	6				NaN	NaN	0	NaN	3139	2657	5796
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5799	19.013	NaN	10855	30	0	3012	0.106				-1	 	0	71	434.7473687983917	867.4801846635834	2	434.74786376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3140	2657	5796
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5800	19.015	NaN	21679	30	0	4406.1	0.106	+			39991	STMPHTSGMNR	11	80	609.7702002778725	1217.525847622545	2	609.7718505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STMPHTSGMNR_	ENSG00000150907|ENST00000379561|FOXO1	131.115847015877	0.0012139520786195257	6				NaN	NaN	0	NaN	3141	2657	5796
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5801	19.016	NaN	20584	30	0	7213.1	0.106	+			39682	STIGPEGVHQK	11	72	384.8715283044985	1151.5927555136955	3	384.8717041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STIGPEGVHQK_	nc|ENSG00000157654|Q9Y2D5-8|PALM2AKAP2;nc|ENSG00000157654|Q9Y2D5-9|PALM2AKAP2	47.227680397652996	0.4590463137409202	6				NaN	NaN	0	NaN	3142	2657	5796
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5802	19.018	NaN	5369.8	30	0	1440.1	0.039			+	21288	KLRALKEETGS	11	53	411.2378545371979	1230.6917342117938	3	411.23828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KLRALKEETGS_	REV__ENST00000354588.7_1_11:62437223-62439219:-|nuORF;REV__ENST00000377954.3_1_11:62437223-62438723:-|nuORF;REV__ENST00000415855.6_1_11:62437223-62439062:-|nuORF;REV__ENST00000431002.6_1_11:62437223-62437496:-|nuORF	22.561587123415745	0.7531385481947795	6				NaN	NaN	0	NaN	3143	2657	5796
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5803	19.019	NaN	19972	30	0	2328.3	0.139	+			19525	KAVNPGRSL	9	84	471.27874467171114	940.5429364102223	2	471.2798156738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KAVNPGRSL_	ENSG00000103429|ENST00000261658|BFAR;nc|ENSG00000103429|Q9NZS9-2|BFAR	87.69643885390035	0.07135982304947239	6				NaN	NaN	0	NaN	3144	2657	5796
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5821	19.057	NaN	412450	30	0	165630	0.153				-1	 	0	83	417.23930745124545	832.4640619692909	2	417.23974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3159	2660	5820
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5822	19.06	NaN	9785.5	30	0	1176	0.106	+			20176	KEKVSTQNL	9	88	523.7951520837255	1045.575751234251	2	523.7958374023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEKVSTQNL_	ENSG00000100342|ENST00000397278|APOL1;nc|ENSG00000100342|O14791-2|APOL1;nc|ENSG00000100342|O14791-3|APOL1	109.43880257439609	0.029570636687953285	6				NaN	NaN	0	NaN	3160	2660	5820
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5823	19.062	NaN	7907.4	30	0	3160.9	0.106	+			17895	IGELSNQKLK	10	52	377.2228844617241	1128.6468239853723	3	377.22393798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IGELSNQKLK_	ENST00000367866.6_1_1:167385133-167385376:+|nuORF	63.53385203322761	0.33370026130094593	6				NaN	NaN	0	NaN	3161	2660	5820
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5824	19.064	NaN	8590.7	30	0	2863.3	0.106	+			7916	DSEGSTKVL	9	71	468.2371105622757	934.4596681913514	2	468.2372741699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DSEGSTKVL_	ENSG00000185658|ENST00000342449|BRWD1;nc|ENSG00000185658|Q9NSI6-3|BRWD1;nc|ENSG00000185658|Q9NSI6|BRWD1	65.46538089061403	0.16805504838372562	6				NaN	NaN	0	NaN	3162	2660	5820
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5825	19.065	NaN	26451	30	0	4994.6	0.106				-1	STLEECYLFG	10	87	406.8494346694322	1217.5264746084965	3	406.84991455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_STLEEC(Carbamidomethyl (C))YLFG_	ENST00000588737.5_1_18:33610974-33611055:-|nuORF	28.081489160057373	0.6505064946289502	6				NaN	NaN	0	NaN	3163	2660	5820
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5826	19.067	NaN	9013.5	30	0	1578	0.106	+			25494	LPSENHKEM	9	81	542.7579732305521	1083.5013935279042	2	542.7586059570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LPSENHKEM_	ENSG00000025772|ENST00000372813|TOMM34	169.6522961985778	0.0028262690464207238	6				NaN	NaN	0	NaN	3164	2660	5820
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5827	19.069	NaN	5980.3	30	0	1119.9	0.036	+			25029	LLGYIWRM	8	73	351.19696915701417	1050.5690780712425	3	352.201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LLGYIWRM_	ENST00000511653.1_2_4:83978119-83978173:+|nuORF	29.841539824830324	0.7289191502596711	6				NaN	NaN	0	NaN	3165	2660	5820
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5845	19.105	NaN	77037	30	0	5583.4	0.214			+	-1	ERLFTMCIPCA	11	105	466.55119224907736	1396.631747347432	3	466.551513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_ERLFTMC(Carbamidomethyl (C))IPC(Carbamidomethyl (C))A_	REV__ENSG00000167333|ENST00000300747|TRIM68;REV__ENST00000532108.1_1_11:4623360-4626734:-|nuORF;REV__TRIM68|p.H390Tfs*6|1|0.36|ENSG00000167333|chr11:4600566-4600566|G/-|frameshift_variant	36.31764250033197	0.6083289427130232	6				NaN	NaN	0	NaN	3180	2663	5844
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5846	19.109	NaN	16703	30	0	6690.4	0.106	+			42883	TEHAHQVVV	9	66	510.2664748209913	1018.5183967087826	2	510.26708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEHAHQVVV_	ENSG00000071127|ENST00000499869|WDR1	54.776311868738084	0.25715957988447635	6				NaN	NaN	0	NaN	3181	2663	5844
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5847	19.111	NaN	12009	30	0	1349.4	0.106				-1	 	0	80	496.7840671419891	991.5535813507782	2	496.7844543457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3182	2663	5844
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5848	19.113	NaN	79685	30	0	12068	0.106	+			49327	VVSEKQFSK	9	98	526.2917457068502	1050.5689384805003	2	526.29296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVSEKQFSK_	ENSG00000163584|ENST00000295830|RPL22L1	147.73206827945663	0.0073977474511673896	6				NaN	NaN	0	NaN	3183	2663	5844
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5849	19.114	NaN	6058.5	30	0	911.25	0.106				-1	 	0	60	366.7339751311199	731.4533973290398	2	366.73431396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3184	2663	5844
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5850	19.116	NaN	21167	30	0	2695.4	0.036	+			34174	RTAVYSLHK	9	83	358.87286290669346	1073.5967593202804	3	358.8733215332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RTAVYSLHK_	ENSG00000138382|ENST00000260953|METTL5	73.84112541714126	0.12417958948937492	6				NaN	NaN	0	NaN	3185	2663	5844
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5851	19.117	NaN	103290	30	0	42132	0.141	+			49328	VVSEKQFSK	9	95	351.19696915701417	1050.5690780712425	3	351.19757080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VVSEKQFSK_	ENSG00000163584|ENST00000295830|RPL22L1	65.15724298150197	0.17062369902793603	6				NaN	NaN	0	NaN	3186	2663	5844
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5869	19.155	NaN	54365	30	0	24207	0.214	+			3452	ASRFKQRL	8	79	335.8698028232594	NaN	0	335.8698425292969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASRFKQRL_	ENST00000520356.5_2_8:135490286-135490631:-|nuORF	44.116797842482775	1.7418937515398478	6				NaN	NaN	0	NaN	3201	2666	5868
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5870	19.159	NaN	25013	30	0	7067.2	0.106				-1	 	0	82	431.25497495413117	860.4953969750624	2	431.2554626464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3202	2666	5868
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5871	19.161	NaN	34744	30	0	4227.8	0.106			+	31500	QLELDGLTQG	10	98	537.2771930330372	1072.5398331328743	2	537.2783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QLELDGLTQG_	REV__sp|P16785|LTP_HCMVALargetegumentproteindeneddylaseOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL48PE=1SV=1;REV__sp|Q6SW84|LTP_HCMVMLargetegumentproteindeneddylaseOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL48PE=3SV=1	75.04331003522576	0.23611669241777622	6				NaN	NaN	0	NaN	3203	2666	5868
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5872	19.163	NaN	25695	30	0	3123	0.106	+			45902	VAQGASKAL	9	77	422.74791700005267	NaN	0	422.7479553222656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VAQGASKAL_	ENSG00000275395|ENST00000616721|FCGBP;nc|ENSG00000275395|Q9Y6R7|FCGBP	96.0336014099291	0.029433397039169355	6				NaN	NaN	0	NaN	3204	2666	5868
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5873	19.164	NaN	8748.8	30	0	1218.5	0.106	+			747	AEDKPRAQL	9	74	514.2793918962094	1026.5442308592187	2	514.2803344726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEDKPRAQL_	ENSG00000105656|ENST00000262809|ELL	69.6276240434122	0.14239879520340665	6				NaN	NaN	0	NaN	3205	2666	5868
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5874	19.166	NaN	5824.3	30	0	891.96	0.036				-1	 	0	48	343.18858451155336	1026.5439241348602	3	343.1891174316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3206	2666	5868
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5875	19.167	NaN	13575	30	0	5042.2	0.14				-1	 	0	50	333.2055910609944	996.5949437831832	3	333.2061462402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3207	2666	5868
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5893	19.206	NaN	121720	30	0	32451	0.159				-1	 	0	87	438.250283685716	874.486014438232	2	438.2506103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3222	2669	5892
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5894	19.209	NaN	50641	30	0	17595	0.106	+			3010	ASFDKAKLK	9	87	504.2980070371954	1006.5814611411909	2	504.2975769042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASFDKAKLK_	ENSG00000034510|ENST00000233143|TMSB10	112.10723106719422	0.02684780151337622	6				NaN	NaN	0	NaN	3223	2669	5892
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5895	19.211	NaN	21578	30	0	2714.6	0.106			+	42406	TAKGAGAPK	9	95	400.7347556275671	NaN	0	400.73480224609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TAKGAGAPK_	REV__ENST00000419888.1_1_20:18763070-18763415:-|nuORF	62.107414245175825	0.1403307765918332	6				NaN	NaN	0	NaN	3224	2669	5892
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5896	19.213	NaN	11688	30	0	1267.4	0.106	+			15504	GVARKEPAR	9	78	492.29069633835286	NaN	0	492.29071044921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GVARKEPAR_	ENSG00000130479|ENST00000324096|MAP1S;MAP1S|p.R854Gfs*156|1|0.43|ENSG00000130479|chr19:17727944-17727944|C/-|frameshift_variant;MAP1S|p.S595Vfs*62|1|0.12|ENSG00000130479|chr19:17727160-17727160|C/-|frameshift_variant;nc|ENSG00000130479|Q66K74-2|MAP1S	60.11826168202944	0.14881452885248947	6				NaN	NaN	0	NaN	3225	2669	5892
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5897	19.215	NaN	71756	30	0	20502	0.106	+			30880	QEKEKCKH	8	95	515.263016892419	1028.511480851638	2	515.26416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QEKEKCKH_	ENSG00000171940|ENST00000371471|ZNF217;ZNF217|p.A693Lfs*10|1|0.48|ENSG00000171940|chr20:53576687-53576687|C/-|frameshift_variant;ZNF217|p.F480Sfs*35|1|0.41|ENSG00000171940|chr20:53578378-53578378|A/-|frameshift_variant	74.25504064058377	0.37144338840759816	6				NaN	NaN	0	NaN	3226	2669	5892
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5898	19.216	NaN	23997	30	0	2728.2	0.106	+			773	AEERRKYTL	9	61	389.21530059892075	1164.6240723969622	3	389.215576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEERRKYTL_	ENSG00000140259|ENST00000267812|MFAP1	37.81151784470057	0.4459294069877048	6				NaN	NaN	0	NaN	3227	2669	5892
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5899	19.218	NaN	22124	30	0	2839.2	0.036	+			16528	HEVKEAQTL	9	87	527.779484504953	1053.5444160767058	2	527.7803955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HEVKEAQTL_	ENSG00000127603|ENST00000564288|MACF1;MACF1|p.A5223Lfs*8|1|0.21|ENSG00000127603|chr1:39388486-39388486|G/-|frameshift_variant;MACF1|p.N4824Kfs*19|1|0.33|ENSG00000127603|chr1:39387292-39387293|-/A|frameshift_variant;MACF1|p.T4896Lfs*29|1|0.27|ENSG00000127603|chr1:39387507-39387507|A/-|frameshift_variant;nc|ENSG00000127603|Q9UPN3-2|MACF1;nc|ENSG00000127603|Q9UPN3-3|MACF1;nc|ENSG00000127603|Q9UPN3-4|MACF1;nc|ENSG00000127603|Q9UPN3-5|MACF1;nc|ENSG00000127603|Q9UPN3|MACF1	101.25262130126117	0.03792372629710479	6				NaN	NaN	0	NaN	3228	2669	5892
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5917	19.254	NaN	286210	30	0	126070	0.071	+			19307	KAGEVFIHK	9	105	343.5337634683424	1027.5794610052271	3	343.534423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAGEVFIHK_	ENSG00000147140|ENST00000276079|NONO;ENST00000486613.6_1_X:70504267-70513876:+|nuORF;ENST00000566277.2_1_16:69791529-69791679:-|nuORF;nc|ENSG00000147140|Q15233-2|NONO	160.8219353732433	0.004346709298329381	6				NaN	NaN	0	NaN	3243	2672	5916
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5918	19.256	NaN	144160	30	0	52035	0.106	+			19308	KAGEVFIHK	9	83	514.7974872350803	1027.5804215369606	2	514.7978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KAGEVFIHK_	ENSG00000147140|ENST00000276079|NONO;ENST00000486613.6_1_X:70504267-70513876:+|nuORF;ENST00000566277.2_1_16:69791529-69791679:-|nuORF;nc|ENSG00000147140|Q15233-2|NONO	159.33581866081465	0.004693099277440949	6				NaN	NaN	0	NaN	3244	2672	5916
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5919	19.257	NaN	321140	30	0	193030	0.106				-1	 	0	96	383.90412689646973	1148.6905512896092	3	383.9044189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3245	2672	5916
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5920	19.26	NaN	37658	30	0	10942	0.106			+	19891	KEETVSKKL	9	88	354.54403320891834	1060.610270226955	3	354.5447998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEETVSKKL_	REV__ENSG00000162782|ENST00000444136|TDRD5;REV__nc|ENSG00000162782|Q8NAT2|TDRD5;REV__TDRD5|p.K412Nfs*17|1|0.14|ENSG00000162782|chr1:179634560-179634560|A/-|frameshift_variant	85.16082228582465	0.07850854922700509	6				NaN	NaN	0	NaN	3246	2672	5916
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5921	19.261	NaN	19325	30	0	3054.9	0.106	+			20111	KEKKLTSDL	9	81	531.312916654825	1060.61128037645	2	531.3136596679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEKKLTSDL_	ENSG00000125844|ENST00000377813|RRBP1;nc|ENSG00000125844|Q9P2E9-3|RRBP1	128.60217544463768	0.015992218256422188	6				NaN	NaN	0	NaN	3247	2672	5916
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5922	19.263	NaN	22992	30	0	5187.8	0.106	+			19699	KDSAHGFLK	9	80	501.7724626119397	1001.5303722906795	2	501.7725524902344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KDSAHGFLK_	ENSG00000091513|ENST00000402696|TF;nc|ENSG00000091513|P02787|TF;TF|p.R327Gfs*35|2|0.17|ENSG00000091513|chr3:133757870-133757870|C/-|frameshift_variant;TF|p.R327Qfs*11|1|0.3|ENSG00000091513|chr3:133757869-133757870|-/C|frameshift_variant	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	3248	2672	5916
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5923	19.265	NaN	12152	30	0	2299.7	0.106			+	29782	PIISNQEFH	9	82	542.7754399897349	1083.5363270462697	2	542.7764892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PIISNQEFH_	REV__ENSG00000156875|ENST00000370152|MFSD14A	41.42661286455405	0.403525789677298	6				NaN	NaN	0	NaN	3249	2672	5916
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5924	19.267	NaN	9886.4	30	0	1726.5	0.034			+	33644	RMKEEKEWMM	10	75	466.55119224907736	1396.631747347432	3	467.22039794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_RMKEEKEWMM_	REV__ENSG00000273976|ENST00000614055|GOLGA6L1;REV__ENSG00000273976|ENST00000614055|GOLGA6L1;REV__ENSG00000277322|ENST00000619213|GOLGA6L6;REV__ENSG00000277322|ENST00000619213|GOLGA6L6;REV__ENSG00000277865|ENST00000622895|GOLGA6L22;REV__ENST00000567652.1_3_15:28798864-28806522:+|nuORF;REV__nc|ENSG00000227717|P0DX01|GOLGA6L25;REV__nc|ENSG00000237850|P0DX00|GOLGA6L24;REV__nc|ENSG00000273756|P0DX02|GOLGA6L26;REV__nc|ENSG00000273756|P0DX02|GOLGA6L26	21.9598887501803	0.7004979571547932	6				NaN	NaN	0	NaN	3250	2672	5916
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5943	19.303	NaN	18482	30	0	6062.1	0.214	+			40450	STVPPSLRK	9	76	492.79413973809636	983.5737265429927	2	492.7952880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STVPPSLRK_	ENSG00000213676|ENST00000375203|ATF6B;nc|ENSG00000213676|Q99941-2|ATF6B	85.16082228582465	0.07850854922700509	6				NaN	NaN	0	NaN	3266	2675	5942
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5944	19.306	NaN	43945	30	0	5336.3	0.106	+			27026	LYSTHCCQGR	10	79	641.2767807937212	1280.5390086542423	2	641.2761840820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_LYSTHC(Carbamidomethyl (C))C(Carbamidomethyl (C))QGR_	ENST00000327367.8_1_15:67482938-67483019:+|nuORF	58.78195531508484	0.37691818691852547	6				NaN	NaN	0	NaN	3267	2675	5942
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5945	19.308	NaN	8036.1	30	0	1248.3	0.106	+			23281	KYLGKNSK	8	68	469.2764250825745	936.5382972319491	2	469.2766418457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KYLGKNSK_	ENSG00000134588|ENST00000511190|USP26	37.15910966729921	0.6739408393984688	6				NaN	NaN	0	NaN	3268	2675	5942
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5946	19.31	NaN	11442	30	0	5397.5	0.106				-1	 	0	50	328.86558247258074	983.5749180179423	3	328.8661193847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3269	2675	5942
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5947	19.312	NaN	13014	30	0	1653.9	0.106	+			39373	STDGAKVFSK	10	78	520.2756599668628	1038.5367670005255	2	520.2747192382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STDGAKVFSK_	ENSG00000100883|ENST00000216774|SRP54;nc|ENSG00000100883|P61011-2|SRP54	147.73206827945663	0.008898223230177705	6				NaN	NaN	0	NaN	3270	2675	5942
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5948	19.314	NaN	16572	30	0	3444.5	0.037			+	18607	ISRVDRPRP	9	74	365.8832548628129	1094.6279351886387	3	366.2188415527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ISRVDRPRP_	REV__ENSG00000266094|ENST00000579436|RASSF5;REV__nc|ENSG00000266094|Q8WWW0-3|RASSF5;REV__RASSF5|p.L342Sfs*18|1|0.32|ENSG00000266094|chr1:206585211-206585211|C/-|frameshift_variant	30.317721548370564	0.5199124245378496	6				NaN	NaN	0	NaN	3271	2675	5942
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5949	19.315	NaN	5019.7	30	0	921.98	0.14				-1	 	0	56	322.8618912094605	965.5638442285815	3	322.8623962402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3272	2675	5942
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5967	19.354	NaN	65475	30	0	11318	0.214			+	36720	SGTTIKTTTST	11	101	549.2878341087726	1096.561115284345	2	549.288818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SGTTIKTTTST_	REV__ENSG00000058272|ENST00000450142|PPP1R12A;REV__nc|ENSG00000058272|O14974-2|PPP1R12A;REV__nc|ENSG00000058272|O14974-4|PPP1R12A;REV__nc|ENSG00000058272|O14974-5|PPP1R12A	73.84112541714126	0.20371746787051248	6				NaN	NaN	0	NaN	3287	2678	5966
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5968	19.357	NaN	13710	30	0	2298.9	0.106				-1	 	0	71	475.7318095573762	949.4490661815524	2	475.7322998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3288	2678	5966
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5969	19.36	NaN	27243	30	0	8488.6	0.106	+			45166	TVMDKTRAL	9	82	525.7846193368842	NaN	0	525.7847290039062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_TVM(Oxidation (M))DKTRAL_	CARD17-CASP1|1|fusion;CARD17-CASP1|2|fusion;CASP1|p.N205Ifs*7|1|0.4|ENSG00000137752|chr11:105030343-105030343|T/-|frameshift_variant;ENSG00000137752|ENST00000533400|CASP1;ENSG00000204397|ENST00000673097|CARD16;ENST00000526511.5_1_11:104901858-104905840:-|nuORF;ENST00000527065.1_1_11:104915107-104915377:-|nuORF;nc|ENSG00000137752|P29466-2|CASP1;nc|ENSG00000204397|Q5EG05|CARD16	99.01295224348159	0.023427377858318825	6				NaN	NaN	0	NaN	3289	2678	5966
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5970	19.361	NaN	10205	30	0	1514.1	0.106	+			8839	EELRRKIQ	8	69	536.3164878405623	1070.6184227479246	2	536.3173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EELRRKIQ_	ENSG00000276043|ENST00000650932|UHRF1;nc|ENSG00000276043|Q96T88-2|UHRF1	68.78682469695295	0.41700713582915416	6				NaN	NaN	0	NaN	3290	2678	5966
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5971	19.363	NaN	12482	30	0	1794.2	0.106				-1	 	0	76	514.2466808715004	1026.4788088098007	2	514.2476806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3291	2678	5966
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5972	19.365	NaN	3512.9	30	0	395.17	0.036			+	-1	SEQCRSKVL	9	60	553.7841795977374	1105.5538062622747	2	553.7850952148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_SEQC(Carbamidomethyl (C))RSKVL_	REV__ENSG00000170373|ENST00000304749|CST1	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	3292	2678	5966
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5973	19.366	NaN	5708.5	30	0	779.69	0.14	+			19990	KEIDTSTKV	9	71	510.7818984185015	1019.549243903803	2	510.7825012207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KEIDTSTKV_	ENSG00000139687|ENST00000267163|RB1;ENST00000525036.1_1_13:48877982-48934322:+|nuORF;RB1|p.L561Mfs*9|1|0.07|ENSG00000139687|chr13:48381428-48381432|CCTTG/-|frameshift_variant;RB1|p.V654Cfs*4|1|0.33|ENSG00000139687|chr13:48456343-48456343|A/-|frameshift_variant;RB1|p.Y529*|1|0.23|ENSG00000139687|chr13:48381334-48381335|AC/-|frameshift_variant;RB1|p.Y529Tfs*3|1|0.08|ENSG00000139687|chr13:48381329-48381329|T/-|frameshift_variant	133.9934435666947	0.013297982075521412	6				NaN	NaN	0	NaN	3293	2678	5966
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5991	19.403	NaN	181620	30	0	76540	0.136				-1	MCFKGLKS	8	87	465.2322914116273	928.4500298900546	2	465.232666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))CFKGLKS_	ENSG00000101074|ENST00000217043|R3HDML	31.954861631926434	0.7126016770032289	6				NaN	NaN	0	NaN	3308	2681	5990
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5992	19.405	NaN	74546	30	0	50103	0.106			+	9689	ELYLLPIGE	9	54	349.5306995486993	NaN	0	349.5306701660156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ELYLLPIGE_	REV__ENSG00000174358|ENST00000304460|SLC6A19	26.69291269510374	0.34280015626154364	6				NaN	NaN	0	NaN	3309	2681	5990
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5993	19.407	NaN	20283	30	0	3387.6	0.106	+			42839	TEEERRAEL	9	79	566.7836558455206	NaN	0	566.7836303710938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TEEERRAEL_	ENSG00000140259|ENST00000267812|MFAP1;ENST00000484386.1_1_15:44097294-44102132:-|nuORF	90.60085204095205	0.040385177724871185	6				NaN	NaN	0	NaN	3310	2681	5990
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5994	19.409	NaN	12663	30	0	1581.3	0.106			+	18605	ISRTVALQ	8	67	444.2683639081429	886.5221748830858	2	444.2688903808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ISRTVALQ_	REV__ENSG00000158428|ENST00000289388|CATIP	75.04331003522576	0.3648751570195447	6				NaN	NaN	0	NaN	3311	2681	5990
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5995	19.411	NaN	12536	30	0	1321.5	0.106	+			27068	MAGALNRK	8	78	430.7426965831791	NaN	0	430.7420349121094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MAGALNRK_	CLEC18B|p.L224Sfs*11|1|0.12|ENSG00000140839|chr16:74413044-74413044|C/-|frameshift_variant;CLEC18B|p.Y150Tfs*26|1|0.45|ENSG00000140839|chr16:74418067-74418067|A/-|frameshift_variant;CLEC18C|p.P94Rfs*82|1|0.24|ENSG00000157335|chr16:70177302-70177302|C/-|frameshift_variant;ENSG00000140839|ENST00000682950|CLEC18B;ENSG00000157322|ENST00000288040|CLEC18A;ENSG00000157335|ENST00000541793|CLEC18C;ENST00000564976.5_1_16:70208088-70217795:+|nuORF;ENST00000569201.6_1_16:70208088-70217386:+|nuORF;ENST00000569268.5_1_16:70208157-70217386:+|nuORF;nc|ENSG00000140839|Q6UXF7-2|CLEC18B;nc|ENSG00000140839|Q6UXF7|CLEC18B;nc|ENSG00000157335|Q8NCF0-2|CLEC18C	79.9392285194092	1.7418937515398478	6				NaN	NaN	0	NaN	3312	2681	5990
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5996	19.413	NaN	6117.7	30	0	2315.2	0.106				-1	 	0	67	616.7893449408353	1231.5641369484706	2	616.7900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3313	2681	5990
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5997	19.415	NaN	8237.8	30	0	1332.2	0.037	+			42845	TEEVRRDDL	9	61	378.1910909988095	1131.5514435966286	3	378.1913757324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TEEVRRDDL_	ENST00000590717.1_1_19:36035753-36035843:-|nuORF	49.44154591367651	0.3095138337212152	6				NaN	NaN	0	NaN	3314	2681	5990
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6015	19.452	NaN	26676	30	0	18081	0.214	+			42518	TAPQAEHAM	9	68	478.21814726407837	954.4217415949568	2	478.218505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAPQAEHAM_	CLUH|p.D1252Tfs*5|1|0.42|ENSG00000132361|chr17:2690771-2690771|T/-|frameshift_variant;CLUH|p.K974Rfs*21|1|0.3|ENSG00000132361|chr17:2694178-2694178|G/-|frameshift_variant;CLUH|p.P878Rfs*12|1|0.23|ENSG00000132361|chr17:2694959-2694959|G/-|frameshift_variant;ENSG00000132361|ENST00000651024|CLUH;nc|ENSG00000132361|O75153|CLUH	80.45461616416974	0.09558281504443908	6				NaN	NaN	0	NaN	3329	2684	6014
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6016	19.456	NaN	33109	30	0	8489.8	0.106				-1	KNCFHLILQ	9	77	391.5467630011186	NaN	0	391.5471496582031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_KNC(Carbamidomethyl (C))FHLILQ_	HDX|p.Q32H|1|0.17|ENSG00000165259|chrX:84475302-84475302|C/G|missense_variant	56.72105179125745	0.16330365735109603	6				NaN	NaN	0	NaN	3330	2684	6014
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6017	19.458	NaN	14084	30	0	1515.4	0.106	+			35812	SEAPPTNQA	9	69	457.71383937348986	913.4131258137797	2	457.7141418457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEAPPTNQA_	ENSG00000179222|ENST00000326587|MAGED1;ENST00000485420.5_1_X:51636757-51640983:+|nuORF;ENST00000494718.5_1_X:51637400-51640272:+|nuORF;MAGED1|p.P628Rfs*18|1|0.09|ENSG00000179222|chrX:51900215-51900215|C/-|frameshift_variant;nc|ENSG00000179222|Q9Y5V3-2|MAGED1	117.81106730687013	0.02252488733980868	6				NaN	NaN	0	NaN	3331	2684	6014
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6018	19.46	NaN	6897	30	0	1782	0.106	+			8719	EEEERRIAE	9	65	580.7801156121337	1159.5456782910674	2	580.78125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EEEERRIAE_	ENSG00000183023|ENST00000332839|SLC8A1;nc|ENSG00000183023|P32418-2|SLC8A1;nc|ENSG00000183023|P32418-3|SLC8A1;nc|ENSG00000183023|P32418-4|SLC8A1;nc|ENSG00000183023|P32418-5|SLC8A1	56.72105179125745	0.24094814563026265	6				NaN	NaN	0	NaN	3332	2684	6014
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6019	19.462	NaN	26194	30	0	4775.8	0.106				-1	 	0	79	447.2632156461865	892.511878359173	2	447.2637634277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3333	2684	6014
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6020	19.463	NaN	9587.2	30	0	3208.8	0.035				-1	ESKAATGACM	10	73	521.2197223434334	1040.4248917536668	2	521.220947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),Oxidation (M)	_ESKAATGAC(Carbamidomethyl (C))M(Oxidation (M))_	ENSG00000078403|ENST00000307729|MLLT10;MLLT10|p.L1011Cfs*11|1|0.05|ENSG00000078403|chr10:21740105-21740105|C/-|frameshift_variant;MLLT10|p.L731Ffs*8|1|0.25|ENSG00000078403|chr10:21731023-21731024|-/T|frameshift_variant;MLLT10|p.Q1012Rfs*10|1|0.05|ENSG00000078403|chr10:21740107-21740107|G/-|frameshift_variant;nc|ENSG00000078403|P55197-1|MLLT10	42.86426827375447	0.522752283233888	6				NaN	NaN	0	NaN	3334	2684	6014
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6021	19.464	NaN	20290	30	0	8362.7	0.145	+			35469	SATESLPTLEL	11	71	387.5402050218594	1159.5987856657782	3	387.5228576660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SATESLPTLEL_	nc|ENSG00000132026|Q9BSG5-2|RTBDN	31.529811441608018	0.6590691889962369	6				NaN	NaN	0	NaN	3335	2684	6014
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6040	19.502	NaN	81937	30	0	20626	0.097	+			34586	RVMKALVNR	9	97	543.8308067356429	1085.6470605380857	2	543.8317260742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVMKALVNR_	ENSG00000149136|ENST00000278412|SSRP1;ENST00000293880.9_1_11:57098199-57100416:-|nuORF	154.1183686248401	0.005909203230691971	6				NaN	NaN	0	NaN	3351	2687	6039
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6041	19.503	NaN	265200	30	0	56678	0.065	+			4143	ATEQPLTAK	9	87	479.76300829720964	957.5114636612193	2	479.76336669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATEQPLTAK_	ENSG00000120725|ENST00000394817|SIL1	199.8913184727681	3.377773596966937E-05	6				NaN	NaN	0	NaN	3352	2687	6039
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6042	19.505	NaN	70596	30	0	9344.4	0.106	+			34587	RVMKALVNR	9	93	362.89006637644695	1085.648369729541	3	362.8902893066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RVMKALVNR_	ENSG00000149136|ENST00000278412|SSRP1;ENST00000293880.9_1_11:57098199-57100416:-|nuORF	80.45461616416974	0.09558281504443908	6				NaN	NaN	0	NaN	3353	2687	6039
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6043	19.507	NaN	36105	30	0	5531.3	0.106				-1	 	0	89	490.31794976303837	978.6213465928768	2	490.3183288574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3354	2687	6039
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6044	19.508	NaN	77522	30	0	18212	0.106	+			5417	ATYHGSFSTK	10	107	549.7635934123555	1097.5126338915109	2	549.7645874023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATYHGSFSTK_	ENSG00000163359|ENST00000295550|COL6A3;ENST00000491769.1_1_2:238233419-238250825:-|nuORF;ENST00000493608.1_1_2:238242084-238243404:-|nuORF;nc|ENSG00000163359|P12111-2|COL6A3;nc|ENSG00000163359|P12111-4|COL6A3	150.15188659993407	0.008468567113416427	6				NaN	NaN	0	NaN	3355	2687	6039
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6045	19.51	NaN	39056	30	0	10706	0.106	+			22333	KTFTVQTTK	9	86	527.3001991496653	1052.5858453661306	2	527.3008422851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KTFTVQTTK_	ENST00000395002.6_1_4:89744147-89744438:-|nuORF	178.54760496737404	0.0014418427517892064	6				NaN	NaN	0	NaN	3356	2687	6039
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6046	19.512	NaN	25895	30	0	10631	0.106				-1	AVCLRASPRM	10	54	387.5402050218594	1159.5987856657782	3	387.5401306152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_AVC(Carbamidomethyl (C))LRASPRM_	ENST00000530275.2_1_1:39875711-39875837:+|nuORF	24.519189625965996	0.6795976720565101	6				NaN	NaN	0	NaN	3357	2687	6039
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6047	19.514	NaN	80691	30	0	18574	0.035			+	22595	KTTAKELQK	9	101	523.813001179693	1045.6114494261858	2	523.8141479492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_KTTAKELQK_	REV__tr|U7SMI0|U7SMI0_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01847PE=4SV=1	131.03138772384656	0.014687601201650916	6				NaN	NaN	0	NaN	3358	2687	6039
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6065	19.551	NaN	101560	30	0	31896	0.214				-1	 	0	107	563.2851192742537	1124.5556856153073	2	563.2862548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3373	2690	6064
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6066	19.554	NaN	18248	30	0	6593.7	0.106			+	-1	VVLHMLKQA	9	68	352.2068204504902	1053.5986319516708	3	352.2073974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_VVLHM(Oxidation (M))LKQA_	REV__ENSG00000165118|ENST00000376344|C9orf64	35.61828744233558	0.47037581924408073	6				NaN	NaN	0	NaN	3374	2690	6064
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6067	19.556	NaN	20432	30	0	3251	0.106	+			16494	HETSKMKVL	9	80	536.7934770066797	1071.5724010801594	2	536.794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HETSKMKVL_	ENSG00000067445|ENST00000173898|TRO;ENSG00000179222|ENST00000326587|MAGED1;ENST00000475183.1_1_X:54953428-54957230:+|nuORF;ENST00000492706.5_1_X:54953428-54957450:+|nuORF;ENST00000494718.5_1_X:51643260-51645023:+|nuORF;nc|ENSG00000067445|Q12816-2|TRO;nc|ENSG00000067445|Q12816-3|TRO;nc|ENSG00000067445|Q12816-4|TRO;nc|ENSG00000067445|Q12816-5|TRO;nc|ENSG00000179222|Q9Y5V3-2|MAGED1;TRO|p.S1034Rfs*10|1|0.07|ENSG00000067445|chrX:54929826-54929826|C/-|frameshift_variant	139.97047562133406	0.010493916756945389	6				NaN	NaN	0	NaN	3375	2690	6064
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6068	19.558	NaN	31063	30	0	11921	0.106	+			18349	IQGSRKRR	8	57	334.2092507708595	999.6059229127786	3	334.209716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IQGSRKRR_	ENST00000256079.8_1_12:30848636-30848696:-|nuORF	23.04248740728303	0.7814162927298575	6				NaN	NaN	0	NaN	3376	2690	6064
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6069	19.56	NaN	23846	30	0	4956.3	0.106	+			5015	ATSAVTVTR	9	76	453.25513993192175	904.4957269306435	2	453.25579833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATSAVTVTR_	ENSG00000123444|ENST00000430070|KBTBD4;nc|ENSG00000123444|Q9NVX7-1|KBTBD4;nc|ENSG00000123444|Q9NVX7-3|KBTBD4	141.52041321563706	0.009766778904176347	6				NaN	NaN	0	NaN	3377	2690	6064
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6070	19.562	NaN	105010	30	0	23386	0.037			+	-1	DKSKCFDLL	9	89	375.8596555895752	NaN	0	375.8597106933594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_DKSKC(Carbamidomethyl (C))FDLL_	REV__ENSG00000151632|ENST00000380753|AKR1C2;REV__ENSG00000187134|ENST00000380872|AKR1C1;REV__ENSG00000196139|ENST00000380554|AKR1C3;REV__ENSG00000198610|ENST00000263126|AKR1C4;REV__ENST00000460124.5_1_10:5032190-5041484:-|nuORF;REV__ENST00000477661.1_1_10:5010485-5019931:+|nuORF;REV__nc|ENSG00000196139|P42330-2|AKR1C3	49.44154591367651	0.21054156626303966	6				NaN	NaN	0	NaN	3378	2690	6064
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6071	19.562	NaN	6101.4	30	0	561.09	0.139	+			45276	TVQVIRTQ	8	73	472.7793111567654	943.5440693803308	2	472.779541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TVQVIRTQ_	ENSG00000205038|ENST00000378402|PKHD1L1;PKHD1L1|p.F723Lfs*26|1|0.15|ENSG00000205038|chr8:109412344-109412344|T/-|frameshift_variant;PKHD1L1|p.G2188Efs*28|1|0.79|ENSG00000205038|chr8:109452767-109452767|G/-|frameshift_variant;PKHD1L1|p.K631Nfs*9|1|0.08|ENSG00000205038|chr8:109408125-109408125|A/-|frameshift_variant;PKHD1L1|p.N718Tfs*31|1|0.35|ENSG00000205038|chr8:109412328-109412328|A/-|frameshift_variant;PKHD1L1|p.N744Ffs*5|1|0.09|ENSG00000205038|chr8:109412406-109412407|-/ACTTTAACTTTAG|frameshift_variant	72.87924865735499	0.38290713436690915	6				NaN	NaN	0	NaN	3379	2690	6064
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6089	19.601	NaN	46131	30	0	7027.7	0.188	+			28080	NAESGRGQVM	10	85	524.7448883343349	1047.4752237354696	2	524.7457885742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAESGRGQVM_	ENSG00000008517|ENST00000525643|IL32;nc|ENSG00000008517|P24001-3|IL32;nc|ENSG00000008517|P24001-4|IL32;nc|ENSG00000008517|P24001|IL32	143.37361013837676	0.009854612225601756	6				NaN	NaN	0	NaN	3394	2693	6088
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6090	19.604	NaN	82357	30	0	24886	0.106	+			48916	VVDNGSGMCK	10	91	505.22510388661476	1008.4356548400295	2	505.2253723144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVDNGSGMCK_	ACTBL2|p.R29Gfs*7|1|0.37|ENSG00000169067|chr5:57482623-57482623|G/-|frameshift_variant;ENSG00000075624|ENST00000646664|ACTB;ENSG00000169067|ENST00000423391|ACTBL2;ENST00000418351.1_1_15:44282253-44282364:-|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000477812.1_1_7:5569027-5569288:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF	128.3478880297481	0.01553957493207534	6				NaN	NaN	0	NaN	3395	2693	6088
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6091	19.606	NaN	15923	30	0	1485.8	0.106	+			34963	SAAKSLLNK	9	89	466.28163709608236	930.5487212589647	2	466.2818298339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAAKSLLNK_	ENST00000474131.5_1_10:75577276-75601951:-|nuORF;ENST00000492020.5_1_10:75597207-75607060:-|nuORF;nc|ENSG00000058404|Q13554-3|CAMK2B;nc|ENSG00000058404|Q13554-4|CAMK2B;nc|ENSG00000058404|Q13554-5|CAMK2B;nc|ENSG00000148660|Q13555-10|CAMK2G;nc|ENSG00000148660|Q13555-2|CAMK2G;nc|ENSG00000148660|Q13555-3|CAMK2G;nc|ENSG00000148660|Q13555-4|CAMK2G;nc|ENSG00000148660|Q13555-7|CAMK2G;nc|ENSG00000148660|Q13555-8|CAMK2G;nc|ENSG00000148660|Q13555-9|CAMK2G;nc|ENSG00000148660|Q13555|CAMK2G	109.47833844074708	0.029530294723441826	6				NaN	NaN	0	NaN	3396	2693	6088
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6092	19.608	NaN	14159	30	0	4652	0.106	+			2403	APALLATQ	8	81	392.73160183235814	783.4486507315163	2	392.731689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_APALLATQ_	ENSG00000249158|ENST00000398640|PCDHA11;nc|ENSG00000249158|Q9Y5I1-2|PCDHA11	65.80317337860623	0.44433089765398776	6				NaN	NaN	0	NaN	3397	2693	6088
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6093	19.61	NaN	5627.6	30	0	1040	0.106	+			40043	STNHTQALLK	10	72	556.8065464239837	NaN	0	556.8067016601562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STNHTQALLK_	ENSG00000205978|ENST00000382554|NYNRIN;NYNRIN|p.A1060Qfs*55|1|0.28|ENSG00000205978|chr14:24414924-24414924|G/-|frameshift_variant;NYNRIN|p.A1288Rfs*152|1|0.45|ENSG00000205978|chr14:24415606-24415606|C/-|frameshift_variant;NYNRIN|p.G1206Vfs*50|1|0.1|ENSG00000205978|chr14:24415362-24415362|G/-|frameshift_variant;NYNRIN|p.L483*|1|0.05|ENSG00000205978|chr14:24409238-24409238|C/-|frameshift_variant;NYNRIN|p.Q626Rfs*7|1|0.37|ENSG00000205978|chr14:24409667-24409667|C/-|frameshift_variant	63.42647028704847	0.20629711391763655	6				NaN	NaN	0	NaN	3398	2693	6088
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6094	19.612	NaN	11036	30	0	4695.5	0.106			+	33740	RPPIKTLNQ	9	64	356.2165313159451	1065.6277645480352	3	356.2169494628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RPPIKTLNQ_	REV__ENSG00000176771|ENST00000409261|NCKAP5	27.882242232435846	0.5426732730940306	6				NaN	NaN	0	NaN	3399	2693	6088
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6095	19.613	NaN	9991.1	30	0	946.05	0.035			+	10187	ETAVEAKVR	9	74	501.7808498264207	1001.5471467196414	2	501.7817687988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ETAVEAKVR_	REV__ENSG00000131778|ENST00000369258|CHD1L;REV__nc|ENSG00000131778|Q86WJ1-2|CHD1L;REV__nc|ENSG00000131778|Q86WJ1-3|CHD1L;REV__nc|ENSG00000131778|Q86WJ1-4|CHD1L	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	3400	2693	6088
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6113	19.65	NaN	18808	30	0	2422.3	0.214	+			857	AEGTAQQRL	9	92	487.2566356493899	972.4987183655799	2	487.2570495605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEGTAQQRL_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	3415	2696	6112
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6114	19.653	NaN	8633	30	0	983.46	0.106			+	33539	RLCKALRNL	9	66	362.89006637644695	1085.648369729541	3	363.2266540527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RLCKALRNL_	REV__ENST00000426819.5_1_21:34911496-34915075:-|nuORF	29.170058357718403	0.5306379469863586	6				NaN	NaN	0	NaN	3416	2696	6112
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6115	19.655	NaN	5651.3	30	0	2443.6	0.106				-1	 	0	56	324.1755514204339	969.5048248615018	3	324.1761474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3417	2696	6112
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6116	19.657	NaN	13457	30	0	1731.3	0.106	+			1093	AELEKHMAA	9	76	500.24952212818135	998.4844913231627	2	500.25018310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AELEKHMAA_	ENSG00000125844|ENST00000377813|RRBP1;ENST00000468428.1_1_20:17600178-17600424:-|nuORF;nc|ENSG00000125844|Q9P2E9-3|RRBP1	115.49404669440601	0.023927554121326553	6				NaN	NaN	0	NaN	3418	2696	6112
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6117	19.659	NaN	21889	30	0	3152.6	0.106	+			45342	TVSKRGAVPT	10	80	508.29777527475323	1014.5809976163065	2	508.2985534667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TVSKRGAVPT_	ENST00000452733.6_1_19:48972489-48972630:+|nuORF	67.49366992349736	0.29779660154124327	6				NaN	NaN	0	NaN	3419	2696	6112
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6118	19.661	NaN	9918.2	30	0	3690.3	0.032	+			25921	LSGSRPVS	8	61	401.72288281545144	801.4312126977029	2	401.7245178222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSGSRPVS_	ENST00000341460.5_1_1:85643893-85647787:-|nuORF	32.81241826257853	0.7059802730411993	6				NaN	NaN	0	NaN	3420	2696	6112
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6119	19.661	NaN	6568.5	30	0	4010.4	0.138	+			299	AAPGEARAM	9	61	437.21550089396777	872.4164488547356	2	437.2159729003906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AAPGEARAM_	ENSG00000165238|ENST00000427277|WNK2;ENST00000467401.1_1_9:96070551-96082671:+|nuORF;nc|ENSG00000165238|Q9Y3S1-2|WNK2;nc|ENSG00000165238|Q9Y3S1-4|WNK2;nc|ENSG00000165238|Q9Y3S1|WNK2	74.25504064058377	0.12238981753128622	6				NaN	NaN	0	NaN	3421	2696	6112
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6137	19.7	NaN	63032	30	0	18509	0.214				-1	 	0	96	453.74750962053724	905.4804663078745	2	453.7480163574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3436	2699	6136
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6138	19.703	NaN	20214	30	0	6042.7	0.106			+	20713	KGRYRRKG	8	79	510.8129068928552	1019.6112608525104	2	510.81365966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KGRYRRKG_	REV__ENSG00000157916|ENST00000605895|RER1	27.882242232435846	0.7440473649773525	6				NaN	NaN	0	NaN	3437	2699	6136
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6139	19.705	NaN	14099	30	0	2511.9	0.106	+			28336	NEHHVNATL	9	70	517.7536757098404	1033.4927984864808	2	517.7544555664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NEHHVNATL_	ENSG00000111615|ENST00000229214|KRR1;ENST00000550023.5_1_12:75900251-75905383:-|nuORF;ENST00000550898.1_1_12:75900510-75905383:-|nuORF;KRR1|p.T261Nfs*3|1|0.24|ENSG00000111615|chr12:75503953-75503954|-/T|frameshift_variant;nc|ENSG00000111615|Q13601-2|KRR1	70.8162118820467	0.13725933411854815	6				NaN	NaN	0	NaN	3438	2699	6136
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6140	19.707	NaN	4762.2	30	0	441	0.106	+			3360	ASNLHALAH	9	76	467.2475629587853	932.4805729843706	2	467.2482604980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASNLHALAH_	ENSG00000152518|ENST00000282388|ZFP36L2;ZFP36L2|p.E103Gfs*23|2|0.66|ENSG00000152518|chr2:43225498-43225499|-/T|frameshift_variant;ZFP36L2|p.F119Ifs*7|1|0.3|ENSG00000152518|chr2:43225449-43225450|-/T|frameshift_variant;ZFP36L2|p.F162Sfs*314|1|0.37|ENSG00000152518|chr2:43225319-43225320|-/AGGGCCG|frameshift_variant;ZFP36L2|p.G144Afs*43|5|0.19|ENSG00000152518|chr2:43225373-43225373|C/-|frameshift_variant;ZFP36L2|p.G145Rfs*329|1|0.41|ENSG00000152518|chr2:43225372-43225373|-/C|frameshift_variant;ZFP36L2|p.H201Pfs*259|1|0.56|ENSG00000152518|chr2:43225199-43225202|GTAT/-|frameshift_variant;ZFP36L2|p.I215Hfs*259|1|0.31|ENSG00000152518|chr2:43225162-43225163|-/A|frameshift_variant;ZFP36L2|p.K173Vfs*300|1|0.38|ENSG00000152518|chr2:43225286-43225287|TT/-|frameshift_variant;ZFP36L2|p.Q138Afs*336|1|0.38|ENSG00000152518|chr2:43225393-43225394|-/A|frameshift_variant;ZFP36L2|p.S151Yfs*323|1|0.23|ENSG00000152518|chr2:43225352-43225353|-/T|frameshift_variant;ZFP36L2|p.S89Gfs*11|1|0.44|ENSG00000152518|chr2:43225532-43225539|GCCGCGCT/-|frameshift_variant;ZFP36L2|p.Y98Lfs*86|1|0.3|ENSG00000152518|chr2:43225502-43225511|AGGGTGCCGT/-|frameshift_variant;ZFP36L2|p.Y98Rfs*4|1|0.14|ENSG00000152518|chr2:43225512-43225513|AG/-|frameshift_variant	74.25504064058377	0.12238981753128622	6				NaN	NaN	0	NaN	3439	2699	6136
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6141	19.709	NaN	4934.2	30	0	529.06	0.106				-1	IPMPRVGVS	9	63	486.2710829900248	970.5276130468496	2	486.78961181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_IPM(Oxidation (M))PRVGVS_	ENSG00000270765|ENST00000604641|GAS2L2;GAS2L2|p.R197Gfs*18|1|0.67|ENSG00000270765|chr17:35750116-35750116|G/-|frameshift_variant;GAS2L2|p.V296Gfs*13|1|0.03|ENSG00000270765|chr17:35747211-35747214|CTTA/-|frameshift_variant;nc|ENSG00000270765|Q8NHY3-2|GAS2L2	40.5726180659479	0.4135428067754104	6				NaN	NaN	0	NaN	3440	2699	6136
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6142	19.711	NaN	4932.5	30	0	482.27	0.036			+	29688	PGSQISKKPL	10	69	527.8168106080428	NaN	0	527.816650390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PGSQISKKPL_	REV__ENSG00000132305|ENST00000410111|IMMT;REV__ENST00000474969.5_1_2:86385703-86422514:-|nuORF;REV__ENST00000486633.1_1_2:86400704-86422514:-|nuORF;REV__nc|ENSG00000132305|Q16891-2|IMMT;REV__nc|ENSG00000132305|Q16891-3|IMMT;REV__nc|ENSG00000132305|Q16891-4|IMMT	69.6276240434122	0.15565754179716834	6				NaN	NaN	0	NaN	3441	2699	6136
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6143	19.711	NaN	6144.6	30	0	979.07	0.139	+			4700	ATLTGGPAR	9	56	422.23798159560744	NaN	0	422.23773193359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATLTGGPAR_	ENSG00000055609|ENST00000262189|KMT2C;ENSG00000167548|ENST00000301067|KMT2D;KMT2C|p.I4868Lfs*37|1|0.28|ENSG00000055609|chr7:152138837-152138837|T/-|frameshift_variant;nc|ENSG00000055609|Q8NEZ4-2|KMT2C;nc|ENSG00000055609|Q8NEZ4-3|KMT2C;nc|ENSG00000167548|O14686-3|KMT2D	60.11826168202944	0.14881452885248947	6				NaN	NaN	0	NaN	3442	2699	6136
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6161	19.751	NaN	57646	30	0	8647.1	0.19	+			5769	AVGNIKVTK	9	89	465.2922050139712	NaN	0	465.29217529296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVGNIKVTK_	DDX18|p.K110Efs*11|1|0.42|ENSG00000088205|chr2:117817678-117817679|-/A|frameshift_variant;ENSG00000088205|ENST00000263239|DDX18	159.27591364854348	0.00998596805711162	6				NaN	NaN	0	NaN	3457	2702	6160
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6162	19.754	NaN	81370	30	0	10299	0.106				-1	ECPRPMSI	8	99	503.228705225918	1004.4428575186361	2	503.229248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_EC(Carbamidomethyl (C))PRPM(Oxidation (M))SI_	ENSG00000131711|ENST00000296755|MAP1B;MAP1B|p.E2165Gfs*3|1|0.32|ENSG00000131711|chr5:72199841-72199842|-/C|frameshift_variant;MAP1B|p.P1789Hfs*34|1|0.31|ENSG00000131711|chr5:72198718-72198718|C/-|frameshift_variant;MAP1B|p.Y2023Afs*214|1|0.03|ENSG00000131711|chr5:72199421-72199422|-/GC|frameshift_variant	74.25504064058377	0.37144338840759816	6				NaN	NaN	0	NaN	3458	2702	6160
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6163	19.756	NaN	23819	30	0	4710.7	0.106	+			39524	STFRESFKK	9	91	377.2052111494192	NaN	0	377.2047424316406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STFRESFKK_	ENSG00000067066|ENST00000340126|SP100;nc|ENSG00000067066|P23497-2|SP100;nc|ENSG00000067066|P23497-3|SP100;nc|ENSG00000067066|P23497-5|SP100;nc|ENSG00000067066|P23497-6|SP100;nc|ENSG00000067066|P23497-7|SP100;nc|ENSG00000067066|P23497|SP100	88.17693792209575	0.04527150213038833	6				NaN	NaN	0	NaN	3459	2702	6160
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6164	19.758	NaN	20108	30	0	4836.3	0.106				-1	RKVPLCGLEAC	11	70	415.88666166258014	1244.6381555879404	3	415.8871154785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_RKVPLC(Carbamidomethyl (C))GLEAC_	ENST00000409645.5_1_2:135209096-135209231:+|nuORF	37.50817390946774	0.5920388381045607	6				NaN	NaN	0	NaN	3460	2702	6160
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6165	19.76	NaN	11206	30	0	2528.1	0.106	+			5562	AVAPNQNLK	9	64	477.7715619229381	NaN	0	477.77154541015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVAPNQNLK_	COL6A2|p.P584Lfs*12|1|0.46|ENSG00000142173|chr21:46124896-46124896|C/-|frameshift_variant;ENSG00000142173|ENST00000300527|COL6A2;nc|ENSG00000142173|P12110-2|COL6A2;nc|ENSG00000142173|P12110-3|COL6A2	65.80317337860623	0.12456833308499304	6				NaN	NaN	0	NaN	3461	2702	6160
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6166	19.762	NaN	16533	30	0	2865.1	0.106	+			27815	MSLDIVLK	8	79	459.77157287185827	NaN	0	459.7674560546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MSLDIVLK_	ENSG00000100151|ENST00000356976|PICK1;ENST00000484021.5_1_22:38453431-38470088:+|nuORF;nc|ENSG00000100151|Q9NRD5-2|PICK1	79.9392285194092	1.7418937515398478	6				NaN	NaN	0	NaN	3462	2702	6160
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6167	19.763	NaN	2160.5	30	0	541.74	0.035				-1	 	0	32	334.494861322452	1000.462754567556	3	334.4953918457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3463	2702	6160
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6185	19.801	NaN	18264	30	0	2956.3	0.214	+			27874	MTKCDVTGGK	10	84	520.2480461229551	1038.48153931271	2	520.2491455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MTKCDVTGGK_	ITGB8|p.K437T|1|0.33|ENSG00000105855|chr7:20401749-20401749|A/C|missense_variant	93.19546047674547	0.11277922692270353	6				NaN	NaN	0	NaN	3478	2705	6184
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6186	19.805	NaN	87405	30	0	13883	0.106				-1	 	0	118	357.53743587280735	1069.5904782186221	3	357.5378112792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3479	2705	6184
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6187	19.807	NaN	51142	30	0	17576	0.106	+			16815	HPDKKIVAY	9	93	535.802169657282	1069.5897863813639	2	535.803466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HPDKKIVAY_	ATXN10|p.F455Lfs*10|1|0.3|ENSG00000130638|chr22:45843115-45843115|T/-|frameshift_variant;ENSG00000130638|ENST00000252934|ATXN10;nc|ENSG00000130638|Q9UBB4-2|ATXN10	159.27591364854348	0.004707062175358555	6				NaN	NaN	0	NaN	3480	2705	6184
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6188	19.809	NaN	62146	30	0	16612	0.106	+			12649	GEIKIHKM	8	89	478.27293296470776	NaN	0	478.27288818359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEIKIHKM_	ENSG00000050405|ENST00000341247|LIMA1;ENST00000552045.1_1_12:50589526-50594661:-|nuORF;LIMA1|p.T536Lfs*38|2|0.4|ENSG00000050405|chr12:50177739-50177739|G/-|frameshift_variant;nc|ENSG00000050405|Q9UHB6-2|LIMA1;nc|ENSG00000050405|Q9UHB6-4|LIMA1;nc|ENSG00000050405|Q9UHB6-5|LIMA1	96.19043198914106	1.7418937515398478	6				NaN	NaN	0	NaN	3481	2705	6184
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6189	19.81	NaN	39648	30	0	18780	0.106	+			32155	QSPQGRVM	8	78	451.7283430498249	901.4421331664498	2	451.72882080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QSPQGRVM_	ENSG00000169564|ENST00000303577|PCBP1	64.20726635412375	0.4601301477144759	6				NaN	NaN	0	NaN	3482	2705	6184
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6190	19.812	NaN	12411	30	0	1859.8	0.035	+			12121	GAGAMPCKSAE	11	67	511.2272766628875	1020.440000392575	2	511.22662353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GAGAMPCKSAE_	DUSP7|p.G209Afs*131|1|0.4|ENSG00000164086|chr3:52054266-52054266|C/-|frameshift_variant;ENSG00000164086|ENST00000495880|DUSP7	58.22992032128504	0.3392555181951113	6				NaN	NaN	0	NaN	3483	2705	6184
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6191	19.813	NaN	21622	30	0	7091.3	0.139				-1	 	0	79	492.79471057395267	983.5748682147054	2	492.7951354980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3484	2705	6184
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6209	19.852	NaN	47131	30	0	8328.6	0.214	+			40360	STTRLYLRK	9	86	379.89579726551756	1136.6655623967526	3	379.89605712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STTRLYLRK_	ENSG00000051180|ENST00000267868|RAD51;nc|ENSG00000051180|Q06609-2|RAD51;nc|ENSG00000051180|Q06609-4|RAD51	38.753607047826485	0.4348790777924195	6				NaN	NaN	0	NaN	3499	2708	6208
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6210	19.856	NaN	17301	30	0	6754.5	0.106	+			13536	GLRYLLAMRLH	11	65	448.2641740539539	1341.7706927620618	3	448.2645568847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GLRYLLAMRLH_	DMXL2|p.F1695Sfs*15|3|0.27|ENSG00000104093|chr15:51488087-51488087|A/-|frameshift_variant;DMXL2|p.F2385Lfs*5|1|0.29|ENSG00000104093|chr15:51474399-51474399|A/-|frameshift_variant;DMXL2|p.M1691*|1|0.08|ENSG00000104093|chr15:51488100-51488100|T/-|frameshift_variant;DMXL2|p.S2492Qfs*21|1|0.29|ENSG00000104093|chr15:51466227-51466227|A/-|frameshift_variant;ENSG00000104093|ENST00000560891|DMXL2;nc|ENSG00000104093|Q8TDJ6-2|DMXL2;nc|ENSG00000104093|Q8TDJ6-3|DMXL2;nc|ENSG00000104093|Q8TDJ6|DMXL2	19.262678746197807	0.7802940895261122	6				NaN	NaN	0	NaN	3500	2708	6208
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6211	19.858	NaN	14163	30	0	2523.2	0.106	+			28339	NEIATYRNLL	10	70	402.8871465632144	1205.6396102898432	3	402.88720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NEIATYRNLL_	CON__O76015;ENSG00000108417|ENST00000225550|KRT37;ENSG00000171360|ENST00000246646|KRT38	44.377184641726394	0.5088115166961078	6				NaN	NaN	0	NaN	3501	2708	6208
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6212	19.86	NaN	50190	30	0	7106.2	0.106	+			42923	TEIEKARAV	9	97	508.7896582970328	1015.5647636608657	2	508.7901916503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TEIEKARAV_	ENSG00000148843|ENST00000369797|PDCD11	166.0711670676379	0.003437550387609957	6				NaN	NaN	0	NaN	3502	2708	6208
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6213	19.862	NaN	8898.3	30	0	3107.6	0.106			+	45990	VATPPTKLMHQ	11	49	408.2263309133618	NaN	0	408.226318359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VATPPTKLMHQ_	REV__ENSG00000137822|ENST00000564079|TUBGCP4;REV__ENST00000563963.1_1_15:43687726-43694213:+|nuORF;REV__nc|ENSG00000137822|Q9UGJ1|TUBGCP4	30.568863376406313	0.42918353898720446	6				NaN	NaN	0	NaN	3503	2708	6208
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6214	19.863	NaN	5119.5	30	0	1531.1	0.038			+	9472	EKQQRELER	9	56	405.885803219145	1214.635580257635	3	405.88604736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EKQQRELER_	REV__ENSG00000093167|ENST00000336686|LRRFIP2;REV__LRRFIP2|p.I487Lfs*4|1|0.41|ENSG00000093167|chr3:37072795-37072795|T/-|frameshift_variant;REV__LRRFIP2|p.V671Sfs*2|1|0.12|ENSG00000093167|chr3:37054455-37054456|-/T|frameshift_variant;REV__nc|ENSG00000093167|Q9Y608-2|LRRFIP2;REV__nc|ENSG00000093167|Q9Y608-4|LRRFIP2;REV__nc|ENSG00000093167|Q9Y608-5|LRRFIP2	33.921630207806714	0.48623198279849766	6				NaN	NaN	0	NaN	3504	2708	6208
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6215	19.864	NaN	5370.6	30	0	634.63	0.141				-1	VCLGKGIWL	9	72	349.2005932490811	1044.5799503474434	3	349.20111083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_VC(Carbamidomethyl (C))LGKGIWL_	ENST00000227155.8_1_11:44641595-44641655:+|nuORF	79.45101966838831	0.09992237243120712	6				NaN	NaN	0	NaN	3505	2708	6208
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6233	19.904	NaN	19385	30	0	11472	0.214				-1	 	0	64	446.2421878618258	890.4698227904516	2	446.2425231933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3520	2711	6232
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6234	19.907	NaN	8831.8	30	0	1258.4	0.106	+			26512	LTPEMLPVK	9	75	514.2963534790063	1026.5781540248124	2	514.2984008789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LTPEMLPVK_	DOCK8|p.E1615Dfs*7|1|0.05|ENSG00000107099|chr9:433933-433934|-/C|frameshift_variant;DOCK8|p.F547Cfs*51|1|0.09|ENSG00000107099|chr9:340281-340282|-/GTTCTAG|frameshift_variant;DOCK8|p.M1114Yfs*4|1|0.4|ENSG00000107099|chr9:405014-405015|-/T|frameshift_variant;DOCK8|p.P952Qfs*24|1|0.35|ENSG00000107099|chr9:386404-386404|C/-|frameshift_variant;ENSG00000107099|ENST00000432829|DOCK8;ENST00000454469.6_1_9:214976-340322:+|nuORF;ENST00000495184.5_1_9:286487-368312:+|nuORF;nc|ENSG00000107099|Q8NF50-2|DOCK8;nc|ENSG00000107099|Q8NF50-3|DOCK8;nc|ENSG00000107099|Q8NF50-4|DOCK8	75.04331003522576	0.118981335847003	6				NaN	NaN	0	NaN	3521	2711	6232
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6235	19.909	NaN	11258	30	0	1800.5	0.106	+			15915	HAASNPPAQY	10	81	528.248130719547	1054.481708505894	2	528.2492065429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HAASNPPAQY_	CEACAM6|p.S270T|1|0.25|ENSG00000086548|chr19:41762073-41762073|T/A|missense_variant;ENSG00000086548|ENST00000199764|CEACAM6;ENSG00000105388|ENST00000221992|CEACAM5;ENSG00000105388|ENST00000221992|CEACAM5;nc|ENSG00000105388|P06731-2|CEACAM5;nc|ENSG00000105388|P06731-2|CEACAM5	90.60085204095205	0.12763388345653318	6				NaN	NaN	0	NaN	3522	2711	6232
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6236	19.911	NaN	15662	30	0	3322.4	0.106				-1	 	0	75	437.7255321209719	873.4365113087438	2	437.7260437011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3523	2711	6232
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6237	19.913	NaN	5967.8	30	0	1853.5	0.106	+			15057	GTNSVICSK	9	60	454.7280577516322	907.4415625700644	2	454.7285461425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTNSVICSK_	ENSG00000102738|ENST00000323563|MRPS31	89.02883481214508	0.06760336634167786	6				NaN	NaN	0	NaN	3524	2711	6232
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6238	19.915	NaN	7979.6	30	0	2012.1	0.037			+	-1	SLIFLFFLM	9	57	382.8805155882161	1145.6197173648484	3	382.8807067871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_SLIFLFFLM(Oxidation (M))_	REV__ENSG00000188167|ENST00000342462|TMPPE;REV__TMPPE|p.G137S|1|0.33|ENSG00000188167|chr3:33093787-33093787|C/T|missense_variant	34.172542307311794	0.4838870758800184	6				NaN	NaN	0	NaN	3525	2711	6232
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6239	19.915	NaN	8563.9	30	0	1994.8	0.142	+			36763	SHPLGILTVR	10	52	364.88850339635434	1091.643680789263	3	364.88897705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SHPLGILTVR_	PPP1R3F|p.D531V|1|0.19|ENSG00000049769|chrX:49286282-49286282|A/T|missense_variant	21.68575002086885	0.7027366847906487	6				NaN	NaN	0	NaN	3526	2711	6232
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6257	19.954	NaN	71225	30	0	21292	0.214				-1	 	0	97	437.75283429451497	873.49111565583	2	437.7530822753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3541	2714	6256
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6258	19.957	NaN	83494	30	0	8755.9	0.106				-1	 	0	102	451.76836973609227	901.5221865389846	2	451.768798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3542	2714	6256
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6259	19.96	NaN	10945	30	0	1797	0.106	+			19776	KEAETRAEF	9	74	540.7690345831946	1079.5235162331892	2	540.7701416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEAETRAEF_	CON__Q3SX28;ENSG00000140416|ENST00000403994|TPM1;ENSG00000143549|ENST00000651641|TPM3;ENSG00000167460|ENST00000643579|TPM4;ENSG00000198467|ENST00000645482|TPM2;ENST00000368528.3_1_3:27674554-27675208:+|nuORF;ENST00000397772.2_1_20:32500135-32500381:-|nuORF;ENST00000469717.5_1_1:154130117-154143232:-|nuORF;ENST00000520239.1_1_8:70042334-70042577:+|nuORF;ENST00000558264.5_1_15:63353458-63363368:+|nuORF;ENST00000559108.1_1_15:63354467-63358183:+|nuORF;nc|ENSG00000140416|P09493-10|TPM1;nc|ENSG00000140416|P09493-2|TPM1;nc|ENSG00000140416|P09493-3|TPM1;nc|ENSG00000140416|P09493-4|TPM1;nc|ENSG00000140416|P09493-5|TPM1;nc|ENSG00000140416|P09493-6|TPM1;nc|ENSG00000140416|P09493-7|TPM1;nc|ENSG00000140416|P09493-8|TPM1;nc|ENSG00000140416|P09493-9|TPM1;nc|ENSG00000143549|P06753-2|TPM3;nc|ENSG00000143549|P06753-3|TPM3;nc|ENSG00000143549|P06753-4|TPM3;nc|ENSG00000143549|P06753-5|TPM3;nc|ENSG00000143549|P06753-6|TPM3;nc|ENSG00000143549|P06753-7|TPM3;nc|ENSG00000167460|P67936-2|TPM4;nc|ENSG00000198467|P07951-2|TPM2;nc|ENSG00000198467|P07951-3|TPM2;TPM3|p.A243T|1|0.29|ENSG00000143549|chr1:154170448-154170448|C/T|missense_variant	109.47833844074708	0.029530294723441826	6				NaN	NaN	0	NaN	3543	2714	6256
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6260	19.961	NaN	17142	30	0	5198.6	0.106	+			3011	ASFDKAKLK	9	80	504.2980070371954	1006.5814611411909	2	504.2978820800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASFDKAKLK_	ENSG00000034510|ENST00000233143|TMSB10	88.17693792209575	0.07000514020414955	6				NaN	NaN	0	NaN	3544	2714	6256
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6261	19.963	NaN	25429	30	0	11091	0.106				-1	SLICGLLLVI	10	71	367.5639111708472	1099.6699041127415	3	367.56439208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_SLIC(Carbamidomethyl (C))GLLLVI_	ENSG00000147650|ENST00000276654|LRP12;nc|ENSG00000147650|Q9Y561-2|LRP12	35.15202426646627	0.5927656479315102	6				NaN	NaN	0	NaN	3545	2714	6256
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6262	19.965	NaN	9250.2	30	0	1222.2	0.034	+			5372	ATYAGVGANK	10	57	476.2463036730171	950.4780544128342	2	476.2481689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATYAGVGANK_	ENSG00000178038|ENST00000318962|ALS2CL;ENST00000383742.7_2_3:46712476-46718839:-|nuORF;ENST00000434140.5_2_3:46717393-46723043:-|nuORF;ENST00000486301.5_1_3:46717393-46718248:-|nuORF;nc|ENSG00000178038|Q60I27-2|ALS2CL;nc|ENSG00000178038|Q60I27-3|ALS2CL;nc|ENSG00000178038|Q60I27-6|ALS2CL	117.81106730687013	0.030421278947300796	6				NaN	NaN	0	NaN	3546	2714	6256
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6263	19.966	NaN	8913.7	30	0	721.21	0.143	+			34228	RTFSYIKNK	9	92	386.2203780603263	1155.639304781179	3	386.2204895019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RTFSYIKNK_	AKAP13|p.T2400Nfs*3|1|0.33|ENSG00000170776|chr15:85730617-85730618|-/C|frameshift_variant;ENSG00000170776|ENST00000394518|AKAP13;ENST00000560957.1_1_15:86225432-86228206:+|nuORF;nc|ENSG00000170776|Q12802-2|AKAP13;nc|ENSG00000170776|Q12802-4|AKAP13	112.10723106719422	0.02684780151337622	6				NaN	NaN	0	NaN	3547	2714	6256
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6281	20.005	NaN	82813	30	0	62392	0.164				-1	 	0	61	365.89216876636294	1094.654676899289	3	365.892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3562	2717	6280
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6282	20.008	NaN	48865	30	0	17039	0.106			+	24927	LKSLRHTIQ	9	90	548.3346056666248	1094.6546584000496	2	548.33544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LKSLRHTIQ_	REV__ENSG00000163424|ENST00000295622|TEX55	93.19546047674547	0.05585629608842056	6				NaN	NaN	0	NaN	3563	2717	6280
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6283	20.01	NaN	46236	30	0	23851	0.106			+	12356	GDPGPKVQ	8	77	399.21095982005266	796.4073667069053	2	399.2111511230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GDPGPKVQ_	REV__ENSG00000138835|ENST00000695401|RGS3;REV__nc|ENSG00000138835|P49796-4|RGS3;REV__nc|ENSG00000138835|P49796-5|RGS3;REV__nc|ENSG00000138835|P49796-6|RGS3;REV__nc|ENSG00000138835|P49796-9|RGS3;REV__nc|ENSG00000138835|P49796|RGS3;REV__RGS3|p.D677Gfs*6|1|0.38|ENSG00000138835|chr9:113536903-113536904|-/C|frameshift_variant;REV__RGS3|p.E892Rfs*27|1|0.39|ENSG00000138835|chr9:113584082-113584082|G/-|frameshift_variant;REV__RGS3|p.R851Gfs*5|1|0.42|ENSG00000138835|chr9:113583958-113583958|C/-|frameshift_variant	71.37791200682192	0.3954169775488141	6				NaN	NaN	0	NaN	3564	2717	6280
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6284	20.012	NaN	9824.9	30	0	4843.3	0.106				-1	 	0	60	485.75055641603507	969.4865598988702	2	485.7510070800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3565	2717	6280
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6285	20.013	NaN	32577	30	0	12778	0.106	+			49015	VVGPVGAGK	9	67	392.23956132219143	782.4645697111829	2	392.2397766113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVGPVGAGK_	ABCC4|p.L883Wfs*7|2|0.22|ENSG00000125257|chr13:95083178-95083178|A/-|frameshift_variant;ABCC4|p.T775Rfs*21|1|0.09|ENSG00000125257|chr13:95161322-95161323|-/AGTATGTCTT|frameshift_variant;ABCC6|p.L780Wfs*31|1|0.44|ENSG00000091262|chr16:16178875-16178875|G/-|frameshift_variant;ENSG00000091262|ENST00000205557|ABCC6;ENSG00000125257|ENST00000645237|ABCC4;nc|ENSG00000091262|O95255-3|ABCC6;nc|ENSG00000125257|O15439-2|ABCC4;nc|ENSG00000125257|O15439-3|ABCC4;nc|ENSG00000125257|O15439-4|ABCC4	55.50420428727701	0.2510918378945873	6				NaN	NaN	0	NaN	3566	2717	6280
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6286	20.015	NaN	6474.7	30	0	1390.3	0.106	+			20690	KGPGAGSAL	9	55	379.21352620530337	756.4124994774068	2	379.21380615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KGPGAGSAL_	AP2A1|p.Q851Rfs*5|1|0.43|ENSG00000196961|chr19:49805672-49805672|C/-|frameshift_variant;ENSG00000196961|ENST00000354293|AP2A1;ENST00000597774.5_1_19:50303271-50309027:+|nuORF;ENST00000600466.1_1_19:50304984-50305399:+|nuORF;nc|ENSG00000196961|O95782|AP2A1	71.87747018426188	0.13267044672804276	6				NaN	NaN	0	NaN	3567	2717	6280
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6287	20.017	NaN	10958	30	0	2307.3	0.034	+			39094	SSSTFGTGLG	10	66	457.2154034471443	912.4162539610886	2	457.21636962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSSTFGTGLG_	ENSG00000078114|ENST00000377122|NEBL	79.45101966838831	0.2001060845487004	6				NaN	NaN	0	NaN	3568	2717	6280
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6305	20.053	NaN	30727	30	0	14874	0.214				-1	 	0	69	363.2321490670489	1086.6746178013468	3	363.2325744628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3583	2720	6304
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6306	20.057	NaN	21024	30	0	3693.2	0.106	+			22063	KSKRRKRE	8	86	544.3444426972585	1086.674332461317	2	544.3455200195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KSKRRKRE_	ENSG00000188177|ENST00000409871|ZC3H6;ZC3H6|p.K196Nfs*4|1|0.1|ENSG00000188177|chr2:112310130-112310130|A/-|frameshift_variant;ZC3H6|p.Q197Tfs*11|1|0.21|ENSG00000188177|chr2:112310129-112310130|-/A|frameshift_variant;ZC3H6|p.Q611Sfs*60|1|0.05|ENSG00000188177|chr2:112324638-112324638|T/-|frameshift_variant;ZC3H6|p.R99Efs*23|1|0.44|ENSG00000188177|chr2:112303304-112303304|A/-|frameshift_variant;ZC3H6|p.S1077Vfs*4|1|0.35|ENSG00000188177|chr2:112332141-112332141|A/-|frameshift_variant	66.42927471994793	0.4381325844043345	6				NaN	NaN	0	NaN	3584	2720	6304
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6307	20.059	NaN	32099	30	0	4008.5	0.106	+			35829	SEDAEKKVL	9	92	509.7741821501159	1017.5338113670318	2	509.77423095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEDAEKKVL_	ENSG00000060138|ENST00000228251|YBX3;ENST00000566722.1_1_16:31580383-31580761:-|nuORF;nc|ENSG00000060138|P16989-2|YBX3;nc|ENSG00000060138|P16989-3|YBX3	145.15565482312357	0.00806134135205793	6				NaN	NaN	0	NaN	3585	2720	6304
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6308	20.061	NaN	12998	30	0	2483.1	0.106	+			15942	HAFESSQKY	9	83	548.7557407905333	1095.4969286478665	2	548.7567749023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HAFESSQKY_	ENSG00000100027|ENST00000339468|YPEL1;ENSG00000175155|ENST00000312655|YPEL2;ENST00000477675.1_1_22:22055420-22058252:-|nuORF;YPEL1|p.E102A|1|0.07|ENSG00000100027|chr22:21701184-21701184|T/G|missense_variant	75.04331003522576	0.118981335847003	6				NaN	NaN	0	NaN	3586	2720	6304
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6309	20.063	NaN	19645	30	0	12089	0.106			+	-1	TRVCGKPSK	9	40	344.8608648665888	NaN	0	344.8608703613281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_TRVC(Carbamidomethyl (C))GKPSK_	REV__ENSG00000023228|ENST00000233190|NDUFS1;REV__nc|ENSG00000023228|P28331-2|NDUFS1;REV__nc|ENSG00000023228|P28331-5|NDUFS1;REV__NDUFS1|p.S363Ffs*4|1|0.21|ENSG00000023228|chr2:206142724-206142731|GGTGTCAG/-|frameshift_variant	22.579656572578934	0.3605601358598771	6				NaN	NaN	0	NaN	3587	2720	6304
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6310	20.064	NaN	8211.2	30	0	1619.6	0.035	+			41794	SVSQKLMAK	9	69	496.2829993235352	NaN	0	496.28375244140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVSQKLMAK_	ENSG00000137200|ENST00000373451|CMTR1	138.06239232086	0.0004957345888817657	6				NaN	NaN	0	NaN	3588	2720	6304
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6311	20.065	NaN	4359.6	30	0	489.99	0.14	+			30769	QDQRVKKV	8	69	500.7977716223955	999.580990311591	2	500.7983703613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QDQRVKKV_	ENST00000399429.7_1_7:7495733-7529039:-|nuORF	69.6276240434122	0.4100012001731381	6				NaN	NaN	0	NaN	3589	2720	6304
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6329	20.105	NaN	274540	30	0	42876	0.214	+			13612	GLYGKSLGLK	10	147	345.8785182167374	1034.6137252504122	3	345.8790588378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GLYGKSLGLK_	tr|U7SJ49|U7SJ49_FUSNUPhosphonatetransportsystempermeaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02090PE=3SV=1	87.69643885390035	0.14426223466775756	6				NaN	NaN	0	NaN	3604	2723	6328
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6330	20.108	NaN	90163	30	0	25258	0.106	+			44397	TSLKSIMKK	9	101	518.3141848710164	1034.6138168088328	2	518.3151245117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TSLKSIMKK_	ENSG00000132854|ENST00000371153|KANK4;nc|ENSG00000132854|Q5T7N3-2|KANK4	145.46060221211434	0.007927189773590037	6				NaN	NaN	0	NaN	3605	2723	6328
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6331	20.11	NaN	92489	30	0	27512	0.106				-1	 	0	106	502.76084868568745	1003.5071444381749	2	502.76129150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3606	2723	6328
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6332	20.112	NaN	152800	30	0	46698	0.106				-1	 	0	97	450.2319820914243	898.4494112496486	2	450.2323913574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3607	2723	6328
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6333	20.114	NaN	183240	30	0	38240	0.106				-1	 	0	137	335.5095430033366	1003.5067996102098	3	335.510009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3608	2723	6328
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6334	20.116	NaN	25737	30	0	3550.6	0.047				-1	 	0	86	610.2726474469397	1827.796112941019	3	610.2734985351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3609	2723	6328
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6335	20.116	NaN	11982	30	0	1581.5	0.141				-1	 	0	87	557.2285539256258	1112.4425549180514	2	557.2296752929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3610	2723	6328
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6355	20.152	NaN	18103	30	0	2703	0.214			+	22282	KTDDKRAAI	9	81	509.28788410285676	NaN	0	509.2878723144531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTDDKRAAI_	REV__ANK2|p.E1746*|1|0.07|ENSG00000145362|chr4:113353848-113353849|-/C|frameshift_variant;REV__ANK2|p.N1476Mfs*12|1|0.21|ENSG00000145362|chr4:113350244-113350244|A/-|frameshift_variant;REV__ANK2|p.R2581Efs*5|1|0.41|ENSG00000145362|chr4:113356352-113356353|-/A|frameshift_variant;REV__ANK2|p.T262Kfs*21|1|0.08|ENSG00000145362|chr4:113240576-113240576|C/-|frameshift_variant;REV__ANK3|p.I2751Nfs*14|2|0.36|ENSG00000151150|chr10:60072629-60072630|-/T|frameshift_variant;REV__ANK3|p.I2751Yfs*21|1|0.07|ENSG00000151150|chr10:60072630-60072630|T/-|frameshift_variant;REV__ANK3|p.I3117Sfs*2|3|0.22|ENSG00000151150|chr10:60071532-60071532|T/-|frameshift_variant;REV__ANK3|p.K1120Sfs*35|1|0.28|ENSG00000151150|chr10:60088328-60088328|T/-|frameshift_variant;REV__ANK3|p.K2612Rfs*25|1|0.43|ENSG00000151150|chr10:60073046-60073046|T/-|frameshift_variant;REV__ANK3|p.K2850Rfs*29|1|0.08|ENSG00000151150|chr10:60072332-60072332|T/-|frameshift_variant;REV__ANK3|p.K3331Nfs*6|1|0.32|ENSG00000151150|chr10:60070888-60070888|T/-|frameshift_variant;REV__ANK3|p.K3778Nfs*26|1|0.37|ENSG00000151150|chr10:60069547-60069547|T/-|frameshift_variant;REV__ANK3|p.K4020Rfs*45|4|0.35|ENSG00000151150|chr10:60068822-60068822|T/-|frameshift_variant;REV__ANK3|p.K4140Nfs*15|2|0.27|ENSG00000151150|chr10:60064188-60064188|T/-|frameshift_variant;REV__ANK3|p.L1161Pfs*13|1|0.32|ENSG00000151150|chr10:60088205-60088206|-/G|frameshift_variant;REV__ANK3|p.L1778Tfs*66|1|0.38|ENSG00000151150|chr10:60075550-60075551|-/G|frameshift_variant;REV__ANK3|p.M3608Cfs*4|1|0.37|ENSG00000151150|chr10:60070059-60070059|T/-|frameshift_variant;REV__ANK3|p.P2846Tfs*8|1|0.32|ENSG00000151150|chr10:60072346-60072347|-/C|frameshift_variant;REV__ANK3|p.R961Kfs*27|1|0.13|ENSG00000151150|chr10:60114291-60114292|-/T|frameshift_variant;REV__ANK3|p.S4352Vfs*2|1|0.51|ENSG00000151150|chr10:60055669-60055670|-/C|frameshift_variant;REV__ANK3|p.W4141Mfs*12|1|0.36|ENSG00000151150|chr10:60064187-60064188|-/T|frameshift_variant;REV__ENSG00000145362|ENST00000357077|ANK2;REV__ENSG00000151150|ENST00000280772|ANK3;REV__nc|ENSG00000145362|Q01484-2|ANK2;REV__nc|ENSG00000145362|Q01484-5|ANK2;REV__nc|ENSG00000151150|Q12955-4|ANK3;REV__nc|ENSG00000151150|Q12955-5|ANK3	68.84614121027924	0.11159004992091766	6				NaN	NaN	0	NaN	3627	2726	6354
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6356	20.156	NaN	7130.7	30	0	4871.2	0.106				-1	 	0	49	326.53018016898784	976.5687111071636	3	326.5307312011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3628	2726	6354
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6357	20.158	NaN	11447	30	0	6600.8	0.106			+	31748	QPCTEDAAEL	10	67	567.2432324190581	1132.4719119049162	2	567.2443237304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_QPC(Carbamidomethyl (C))TEDAAEL_	REV__SLC19A1|p.P556L|1|0.11|ENSG00000173638|chr21:45515767-45515767|G/A|missense_variant	64.20726635412375	0.3275756395432415	6				NaN	NaN	0	NaN	3629	2726	6354
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6358	20.16	NaN	54868	30	0	10468	0.106	+			23942	LDQMPPEE	8	103	487.7103197234742	973.4060865137484	2	487.7108154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_LDQM(Oxidation (M))PPEE_	nc|ENSG00000114026|O15527-7|OGG1	56.72105179125745	0.5342425954139568	6				NaN	NaN	0	NaN	3630	2726	6354
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6359	20.161	NaN	9423.5	30	0	2145.5	0.106	+			46822	VIDNGSGMCK	10	65	540.743116135641	1079.471679338082	2	540.7445068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_VIDNGSGMC(Carbamidomethyl (C))K_	ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196604|ENST00000409914|POTEF;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000204434|Q9BYX7|POTEKP;POTEE|p.N792Kfs*34|1|0.2|ENSG00000188219|chr2:131263828-131263829|-/A|frameshift_variant;POTEF|p.R728Gfs*16|3|0.06|ENSG00000196604|chr2:130075290-130075290|G/-|frameshift_variant	128.60217544463768	0.01518043149187549	6				NaN	NaN	0	NaN	3631	2726	6354
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6360	20.163	NaN	9538.6	30	0	1384.4	0.036	+			16816	HPDKKIVAY	9	83	535.802169657282	1069.5897863813639	2	536.3002319335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HPDKKIVAY_	ATXN10|p.F455Lfs*10|1|0.3|ENSG00000130638|chr22:45843115-45843115|T/-|frameshift_variant;ENSG00000130638|ENST00000252934|ATXN10;nc|ENSG00000130638|Q9UBB4-2|ATXN10	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	3632	2726	6354
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6361	20.164	NaN	8242.8	30	0	1880.6	0.141				-1	LEGTSLPDCC	10	71	547.7276965327186	1093.440840132237	2	547.7288818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_LEGTSLPDC(Carbamidomethyl (C))C_	ENST00000285850.11_1_14:23284527-23284629:-|nuORF;ENST00000397528.8_1_14:23282630-23285098:-|nuORF;ENST00000555702.5_1_14:23282630-23288854:-|nuORF	35.61828744233558	0.588957954432594	6				NaN	NaN	0	NaN	3633	2726	6354
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6379	20.203	NaN	148090	30	0	59905	0.174				-1	 	0	88	468.2551961823063	934.4958394314126	2	468.25537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3648	2729	6378
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6380	20.206	NaN	26793	30	0	7851.2	0.106				-1	 	0	78	437.2368916188921	872.4592303045843	2	437.2371520996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3649	2729	6378
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6381	20.208	NaN	8853.3	30	0	1781.1	0.106	+			15766	GVSTNISTK	9	66	453.7478208586027	NaN	0	453.74786376953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GVSTNISTK_	ENSG00000110713|ENST00000324932|NUP98;nc|ENSG00000110713|P52948-2|NUP98;nc|ENSG00000110713|P52948-3|NUP98;nc|ENSG00000110713|P52948-4|NUP98;nc|ENSG00000110713|P52948-6|NUP98;nc|ENSG00000110713|P52948|NUP98;NUP98|p.F410Lfs*77|1|0.19|ENSG00000110713|chr11:3753404-3753404|A/-|frameshift_variant;NUP98|p.N1328Tfs*89|2|0.22|ENSG00000110713|chr11:3699159-3699159|T/-|frameshift_variant	48.601550744091256	0.21633042548693873	6				NaN	NaN	0	NaN	3650	2729	6378
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6382	20.21	NaN	8093	30	0	609.37	0.106	+			39249	STALTVTSVR	10	80	517.7948025971573	1033.5750522611145	2	517.795654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STALTVTSVR_	ENST00000497872.3_1_14:106170727-106170913:-|nuORF;nc|ENSG00000211890|P01877|IGHA2;nc|ENSG00000211895|P01876|IGHA1	61.691277971877994	0.35045824941635534	6				NaN	NaN	0	NaN	3651	2729	6378
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6383	20.212	NaN	9563	30	0	2185.8	0.106				-1	 	0	63	441.73717752289514	881.4598021125903	2	441.7372741699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3652	2729	6378
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6384	20.214	NaN	9348.8	30	0	1897.9	0.106	+			3471	ASSAPPLTGK	10	78	464.7582201766997	927.5018874201994	2	464.7583312988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASSAPPLTGK_	ENSG00000100105|ENST00000266269|PATZ1;nc|ENSG00000100105|Q9HBE1-2|PATZ1;nc|ENSG00000100105|Q9HBE1-3|PATZ1;nc|ENSG00000100105|Q9HBE1-4|PATZ1;PATZ1|p.G285Pfs*14|1|0.11|ENSG00000100105|chr22:31344749-31344750|CC/-|frameshift_variant	40.05817265558897	0.5486090488315611	6				NaN	NaN	0	NaN	3653	2729	6378
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6385	20.216	NaN	7299.3	30	0	4153.8	0.037			+	44203	TRGKSRCEQG	10	67	561.2788056090342	1120.5430582848683	2	561.2800903320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TRGKSRCEQG_	REV__ENST00000257181.9_1_1:52883535-52883676:+|nuORF	31.634271133179894	0.6214930414500597	6				NaN	NaN	0	NaN	3654	2729	6378
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6403	20.253	NaN	91053	30	0	47425	0.214	+			49036	VVHPHPNCGPP	11	76	385.191690581826	1152.553242345678	3	385.19232177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVHPHPNCGPP_	ENSG00000140511|ENST00000359595|HAPLN3	41.42661286455405	0.5384226294179143	6				NaN	NaN	0	NaN	3669	2732	6402
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6404	20.257	NaN	14611	30	0	3073.1	0.106	+			44973	TVCEKTVLK	9	76	539.3014964174366	1076.5884399016732	2	539.3026123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_TVC(Carbamidomethyl (C))EKTVLK_	ENSG00000198722|ENST00000635942|UNC13B;nc|ENSG00000198722|O14795-2|UNC13B;nc|ENSG00000198722|O14795|UNC13B	159.27591364854348	0.004707062175358555	6				NaN	NaN	0	NaN	3670	2732	6402
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6405	20.259	NaN	15673	30	0	3248.5	0.106	+			36791	SICGKSFTK	9	84	514.2647750216723	1026.5149971101446	2	514.265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SIC(Carbamidomethyl (C))GKSFTK_	ENSG00000127081|ENST00000375495|ZNF484;nc|ENSG00000127081|Q5JVG2-2|ZNF484;nc|ENSG00000127081|Q5JVG2-3|ZNF484	102.0615471778698	0.03709830720253279	6				NaN	NaN	0	NaN	3671	2732	6402
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6406	20.261	NaN	25533	30	0	3711.1	0.106	+			42006	SVYKEAIQK	9	84	533.3000209625231	1064.5854889918462	2	533.3008422851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVYKEAIQK_	ENSG00000179104|ENST00000321196|TMTC2;ENST00000551915.5_1_12:83081308-83379891:+|nuORF;TMTC2|p.A737Qfs*4|1|0.25|ENSG00000179104|chr12:83050953-83050953|A/-|frameshift_variant	117.81106730687013	0.02252488733980868	6				NaN	NaN	0	NaN	3672	2732	6402
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6407	20.262	NaN	5269.3	30	0	949.57	0.106	+			48	AAAPGSRSL	9	68	415.2294218083093	828.4442906834187	2	415.2298889160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AAAPGSRSL_	ENSG00000240445|ENST00000395675|FOXO3B;nc|ENSG00000290687|P0CG31|ZNF286B	30.317721548370564	0.5199124245378496	6				NaN	NaN	0	NaN	3673	2732	6402
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6408	20.264	NaN	16942	30	0	1922.2	0.034	+			42472	TAMNGNLAK	9	89	460.2385907886096	918.4626286440192	2	460.2366943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TAMNGNLAK_	ENSG00000184675|ENST00000374869|AMER1	79.71258880314673	0.09879134589249085	6				NaN	NaN	0	NaN	3674	2732	6402
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6409	20.265	NaN	23105	30	0	5326.9	0.14				-1	 	0	86	521.8031745242811	1041.591796115362	2	521.8041381835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3675	2732	6402
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6427	20.304	NaN	89823	30	0	13817	0.214	+			24592	LGPVVMCKKAA	11	131	372.8801777783693	1115.6187039353078	3	372.8805236816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LGPVVMCKKAA_	ENSG00000005007|ENST00000262803|UPF1;nc|ENSG00000005007|Q92900|UPF1	30.503639358989545	0.6698328972638299	6				NaN	NaN	0	NaN	3690	2735	6426
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6428	20.308	NaN	17321	30	0	2954.4	0.106				-1	 	0	81	530.3108500022828	1058.6071470713655	2	530.311767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3691	2735	6426
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6429	20.31	NaN	13015	30	0	1353.3	0.106			+	33229	RFTTPGLKNLQ	11	86	425.57912052049693	1273.7155321616908	3	425.5796203613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RFTTPGLKNLQ_	REV__CD101|p.P656Rfs*10|1|0.34|ENSG00000134256|chr1:117018505-117018505|C/-|frameshift_variant;REV__ENSG00000134256|ENST00000682167|CD101	41.42661286455405	0.5384226294179143	6				NaN	NaN	0	NaN	3692	2735	6426
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6430	20.312	NaN	39292	30	0	5216.6	0.106				-1	 	0	87	464.78174437085096	927.5489358085019	2	464.7820129394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3693	2735	6426
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6431	20.314	NaN	14734	30	0	1672.1	0.106				-1	 	0	81	502.27389719034255	1002.5332414474851	2	502.2744445800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3694	2735	6426
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6432	20.315	NaN	4675.5	30	0	689.75	0.034			+	2350	AMTSRTKE	8	56	462.2335957978199	922.4526386624398	2	462.234130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AMTSRTKE_	REV__ENST00000576058.2_1_16:13552215-13552527:+|nuORF	54.776311868738084	0.5534952410049249	6				NaN	NaN	0	NaN	3695	2735	6426
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6433	20.316	NaN	12907	30	0	1455.9	0.14	+			37940	SPEEQAKTY	9	89	526.7479988966224	1051.4814448600448	2	526.748779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SPEEQAKTY_	ENSG00000243725|ENST00000371281|TTC4;ENST00000486621.1_1_1:55181548-55183334:+|nuORF;TTC4|p.D84G|1|0.21|ENSG00000243725|chr1:54717513-54717513|A/G|missense_variant	76.16968421966216	0.11411088698345859	6				NaN	NaN	0	NaN	3696	2735	6426
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6451	20.354	NaN	180080	30	0	31777	0.202				-1	SMDGHPSR	8	94	451.69253627489604	901.3705196165921	2	451.6929626464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_SM(Oxidation (M))DGHPSR_	AGO4|p.E724Kfs*16|1|0.24|ENSG00000134698|chr1:35841744-35841745|AG/-|frameshift_variant;ENSG00000134698|ENST00000373210|AGO4	73.97473282117947	0.3737790450121076	6				NaN	NaN	0	NaN	3711	2738	6450
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6452	20.358	NaN	93667	30	0	51652	0.106			+	-1	GLKMGILRLE	10	90	382.5615038401596	1144.662682120679	3	382.56182861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_GLKM(Oxidation (M))GILRLE_	REV__ENSG00000142733|ENST00000357582|MAP3K6;REV__nc|ENSG00000142733|O95382-2|MAP3K6;REV__nc|ENSG00000142733|O95382-3|MAP3K6	45.02220120713402	0.5028680121232791	6				NaN	NaN	0	NaN	3712	2738	6450
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6453	20.36	NaN	25314	30	0	6624.6	0.106			+	-1	LLCGILMYL	9	66	365.86933994005227	1094.5861904203568	3	365.86968994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LLC(Carbamidomethyl (C))GILMYL_	REV__tr|U7SQT6|U7SQT6_FUSNUEamAdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01789PE=4SV=1	37.15910966729921	0.4535818937225704	6				NaN	NaN	0	NaN	3713	2738	6450
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6454	20.361	NaN	49701	30	0	9951	0.106			+	17989	IHRCFIHL	8	78	519.7873889634253	1037.5602249936505	2	519.788330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IHRCFIHL_	REV__ENST00000529652.1_1_17:80551717-80553973:+|nuORF	60.29395666154354	0.49887135096048313	6				NaN	NaN	0	NaN	3714	2738	6450
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6455	20.363	NaN	14595	30	0	1014.2	0.106	+			16191	HEAQHGVTSL	10	84	539.7679818100179	NaN	0	539.767822265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HEAQHGVTSL_	ENSG00000100105|ENST00000266269|PATZ1;nc|ENSG00000100105|Q9HBE1-2|PATZ1;nc|ENSG00000100105|Q9HBE1-3|PATZ1;nc|ENSG00000100105|Q9HBE1-4|PATZ1	109.43880257439609	0.012705359521079733	6				NaN	NaN	0	NaN	3715	2738	6450
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6456	20.365	NaN	14392	30	0	4499.6	0.106	+			16978	HPQQKVAVY	9	75	535.2933733464218	1068.5721937596436	2	535.29345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HPQQKVAVY_	ENSG00000102871|ENST00000345057|TRADD;ENST00000566104.1_1_16:67189803-67193780:-|nuORF	115.49404669440601	0.023927554121326553	6				NaN	NaN	0	NaN	3716	2738	6450
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6457	20.367	NaN	30765	30	0	6313.4	0.036	+			18183	ILYDHAHVK	9	92	548.3003604365102	1094.5861679398204	2	548.30126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ILYDHAHVK_	ENSG00000115758|ENST00000234111|ODC1	98.62937762414208	0.04060045538121712	6				NaN	NaN	0	NaN	3717	2738	6450
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6475	20.404	NaN	36926	30	0	8097.6	0.214	+			1312	AETEEIPKI	9	96	343.85338757762	1028.53833333306	3	343.85394287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AETEEIPKI_	ENSG00000067900|ENST00000399799|ROCK1;ROCK1|p.K1307Nfs*3|1|0.28|ENSG00000067900|chr18:20953718-20953718|T/-|frameshift_variant;ROCK1|p.P1257Lfs*3|1|0.21|ENSG00000067900|chr18:20954866-20954866|G/-|frameshift_variant	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	3732	2741	6474
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6476	20.407	NaN	6454.8	30	0	963.38	0.106				-1	 	0	78	553.8132200249377	1105.6118871166752	2	553.8141479492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3733	2741	6474
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6477	20.409	NaN	22774	30	0	6824.4	0.106	+			8927	EEVQFLGDRG	10	76	575.2810238243981	1148.547494715596	2	575.2821655273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EEVQFLGDRG_	AK9|p.A1133V|1|0.3|ENSG00000155085|chr6:109533423-109533423|G/A|missense_variant	104.74654710444128	0.06360088227210728	6				NaN	NaN	0	NaN	3734	2741	6474
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6478	20.411	NaN	9998.9	30	0	3301.7	0.106	+			3012	ASFDKAKLK	9	74	504.2980070371954	1006.5814611411909	2	504.2976989746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASFDKAKLK_	ENSG00000034510|ENST00000233143|TMSB10	85.86182877749512	0.07653218437724067	6				NaN	NaN	0	NaN	3735	2741	6474
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6479	20.413	NaN	12979	30	0	3255.7	0.106	+			39122	SSTPSPKQRSK	11	64	401.5541479633746	1201.6406144903237	3	401.5542907714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSTPSPKQRSK_	ENSG00000106948|ENST00000374088|AKNA;nc|ENSG00000106948|Q7Z591-2|AKNA;nc|ENSG00000106948|Q7Z591-4|AKNA;nc|ENSG00000106948|Q7Z591-5|AKNA;nc|ENSG00000106948|Q7Z591-7|AKNA;nc|ENSG00000106948|Q7Z591-8|AKNA	36.446750945000026	0.6065623449959539	6				NaN	NaN	0	NaN	3736	2741	6474
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6480	20.415	NaN	12444	30	0	2854.5	0.033			+	30519	QAGVWAQI	8	70	436.73640025749205	NaN	0	436.7364196777344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QAGVWAQI_	REV__ENSG00000182318|ENST00000329665|ZSCAN22	42.47446043378293	1.7418937515398478	6				NaN	NaN	0	NaN	3737	2741	6474
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6481	20.415	NaN	5298.1	30	0	777.53	0.136				-1	 	0	62	350.7206179866812	699.4266830401624	2	350.72119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3738	2741	6474
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6499	20.453	NaN	11904	30	0	2715.5	0.214				-1	QGVGMVSGFGQ	11	74	541.7509886322373	1081.4874243312745	2	541.752197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_QGVGM(Oxidation (M))VSGFGQ_	ENSG00000196782|ENST00000509479|MAML3	51.19269402634007	0.4047928213175833	6				NaN	NaN	0	NaN	3753	2744	6498
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6500	20.457	NaN	12635	30	0	2303.3	0.106	+			2551	AQAQPFGSK	9	68	467.2426663652263	932.4707797972526	2	467.242919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AQAQPFGSK_	ENSG00000115648|ENST00000264605|MLPH;ENST00000468178.5_1_2:238402069-238454213:+|nuORF;nc|ENSG00000115648|Q9BV36-2|MLPH;nc|ENSG00000115648|Q9BV36-3|MLPH;nc|ENSG00000115648|Q9BV36-4|MLPH;nc|ENSG00000115648|Q9BV36-5|MLPH	80.45461616416974	0.09558281504443908	6				NaN	NaN	0	NaN	3754	2744	6498
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6501	20.459	NaN	8717.8	30	0	1739.3	0.106	+			48881	VVDCGTGYTK	10	80	550.2581048069607	1098.5016566807212	2	550.2586059570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_VVDC(Carbamidomethyl (C))GTGYTK_	ACTR3B-JMJD1C|1|fusion;ENSG00000115091|ENST00000263238|ACTR3;ENSG00000133627|ENST00000256001|ACTR3B;nc|ENSG00000133627|Q9P1U1-3|ACTR3B	94.4091291819064	0.10583072883246657	6				NaN	NaN	0	NaN	3755	2744	6498
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6502	20.461	NaN	8507.6	30	0	1187.5	0.106	+			34363	RTQIPMSEK	9	73	545.2887467899095	1088.562940646619	2	545.2899780273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RTQIPMSEK_	ENSG00000169435|ENST00000307439|RASSF6;nc|ENSG00000169435|Q6ZTQ3-3|RASSF6;nc|ENSG00000169435|Q6ZTQ3-4|RASSF6;nc|ENSG00000169435|Q6ZTQ3|RASSF6;RASSF6|p.K253Nfs*25|1|0.16|ENSG00000169435|chr4:73582195-73582195|T/-|frameshift_variant	120.63048641472336	0.02081808097628796	6				NaN	NaN	0	NaN	3756	2744	6498
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6503	20.463	NaN	27281	30	0	9417.8	0.106	+			24523	LGKYVLYEVQV	11	79	437.58212885998887	NaN	0	437.5820617675781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LGKYVLYEVQV_	ENSG00000069188|ENST00000392650|SDK2;ENST00000479356.1_1_17:71354047-71433905:-|nuORF;nc|ENSG00000069188|Q58EX2-2|SDK2;nc|ENSG00000069188|Q58EX2-3|SDK2;nc|ENSG00000069188|Q58EX2-4|SDK2;SDK2|p.P1324Lfs*69|1|0.1|ENSG00000069188|chr17:73391466-73391466|G/-|frameshift_variant;SDK2|p.R2017Gfs*28|1|0.29|ENSG00000069188|chr17:73348716-73348716|G/-|frameshift_variant;SDK2|p.T1715Pfs*21|1|0.11|ENSG00000069188|chr17:73368432-73368432|G/-|frameshift_variant	41.080066990542036	0.3793850210388171	6				NaN	NaN	0	NaN	3757	2744	6498
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6504	20.465	NaN	7507	30	0	2025.2	0.037	+			3640	ASWPTHPHR	9	66	363.51651096704325	1087.5277035013298	3	363.180419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASWPTHPHR_	ENSG00000074755|ENST00000381638|ZZEF1;ENST00000570365.1_1_17:3970518-3976036:-|nuORF;ZZEF1|p.K2387Sfs*40|1|0.38|ENSG00000074755|chr17:4022761-4022761|T/-|frameshift_variant	31.529811441608018	0.5085848003137583	6				NaN	NaN	0	NaN	3758	2744	6498
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6505	20.465	NaN	20867	30	0	5110.1	0.141			+	25997	LSKKRHNR	8	72	346.8810999182991	1037.6214703550975	3	346.881591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSKKRHNR_	REV__RERE|p.N49Ifs*46|1|0.41|ENSG00000142599|chr1:8656152-8656152|T/-|frameshift_variant	30.503639358989545	0.7238069182250283	6				NaN	NaN	0	NaN	3759	2744	6498
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6523	20.505	NaN	25415	30	0	6639.4	0.214	+			39257	STAMNGNLAK	10	94	503.7520458560471	1005.4895387788943	2	503.7528076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STAMNGNLAK_	ENSG00000184675|ENST00000374869|AMER1	112.41091882917199	0.040839805697094264	6				NaN	NaN	0	NaN	3774	2747	6522
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6524	20.508	NaN	50232	30	0	10676	0.106	+			48990	VVGKPIEVQK	10	100	548.8393497180818	1095.6641465029636	2	548.8402099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVGKPIEVQK_	ENSG00000166391|ENST00000198801|MOGAT2;nc|ENSG00000166391|Q3SYC2-2|MOGAT2	144.55000592163006	0.009540960254669297	6				NaN	NaN	0	NaN	3775	2747	6522
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6525	20.51	NaN	31131	30	0	10676	0.106				-1	 	0	75	432.2446994468489	862.4748459604979	2	432.24481201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3776	2747	6522
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6526	20.512	NaN	13717	30	0	1561.3	0.106	+			1075	AEKYAKESL	9	82	519.7765055142311	1037.538458095262	2	519.7772827148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEKYAKESL_	ENSG00000100567|ENST00000216455|PSMA3;ENST00000557290.1_1_14:58737043-58738610:+|nuORF;nc|ENSG00000100567|P25788-2|PSMA3	106.88024417677582	0.032181361622142884	6				NaN	NaN	0	NaN	3777	2747	6522
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6527	20.514	NaN	7772.8	30	0	1262.2	0.106	+			36774	SIAKFLRNV	9	66	349.8812962133848	1046.6220592403545	3	349.8817443847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SIAKFLRNV_	ENSG00000138399|ENST00000453153|FASTKD1;ENST00000487293.2_1_2:170416895-170419880:-|nuORF;nc|ENSG00000138399|Q53R41-2|FASTKD1	31.529811441608018	0.5085848003137583	6				NaN	NaN	0	NaN	3778	2747	6522
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6528	20.516	NaN	5624.8	30	0	846.78	0.035	+			794	AEFKRAVKV	9	68	524.3184179925587	1046.6222830519173	2	524.3192749023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEFKRAVKV_	ENSG00000165487|ENST00000382374|MICU2;ENST00000479790.2_1_13:22067390-22069479:-|nuORF	81.52500206392136	0.09095445986635249	6				NaN	NaN	0	NaN	3779	2747	6522
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6529	20.516	NaN	11668	30	0	1082.7	0.139	+			23943	LDQMPPEE	8	77	487.7103197234742	973.4060865137484	2	487.71063232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_LDQM(Oxidation (M))PPEE_	nc|ENSG00000114026|O15527-7|OGG1	52.936696900407355	0.5717071646657654	6				NaN	NaN	0	NaN	3780	2747	6522
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6547	20.554	NaN	155260	30	0	13408	0.165				-1	 	0	95	544.7711431132565	1087.5277332933128	2	544.7720947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3795	2750	6546
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6548	20.557	NaN	60919	30	0	18137	0.106	+			17852	IFRHDCQL	8	77	363.51651096704325	1087.5277035013298	3	363.51715087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_IFRHDC(Carbamidomethyl (C))QL_	GUCY2C|p.L1022Sfs*34|1|0.04|ENSG00000070019|chr12:14613274-14613275|-/GCTG|frameshift_variant	44.116797842482775	0.6307669463330267	6				NaN	NaN	0	NaN	3796	2750	6546
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6549	20.559	NaN	21096	30	0	7034.5	0.106			+	44836	TTTADIDDE	9	73	490.7063660507467	979.3981791682934	2	490.7067565917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TTTADIDDE_	REV__ENSG00000154118|ENST00000284262|JPH3;REV__JPH3|p.E286K|1|0.5|ENSG00000154118|chr16:87644731-87644731|G/A|missense_variant;REV__JPH3|p.L354Cfs*117|1|0.57|ENSG00000154118|chr16:87644931-87644931|C/-|frameshift_variant;REV__JPH3|p.T482Pfs*127|1|0.4|ENSG00000154118|chr16:87689800-87689800|C/-|frameshift_variant	38.80614096846853	0.43426287593479557	6				NaN	NaN	0	NaN	3797	2750	6546
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6550	20.561	NaN	25468	30	0	5067.3	0.106			+	843	AEGPAAWGAQ	10	89	479.22408694989025	956.4336209665805	2	479.2244873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEGPAAWGAQ_	REV__ENSG00000165238|ENST00000427277|WNK2;REV__ENST00000467401.1_1_9:96070551-96082671:+|nuORF;REV__nc|ENSG00000165238|Q9Y3S1-2|WNK2;REV__nc|ENSG00000165238|Q9Y3S1-4|WNK2;REV__nc|ENSG00000165238|Q9Y3S1|WNK2	58.22992032128504	0.38193887838457763	6				NaN	NaN	0	NaN	3798	2750	6546
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6551	20.562	NaN	29664	30	0	17434	0.106	+			6480	AVYLSTCKDSK	11	69	424.54676865914723	1270.6184765776418	3	424.548095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_AVYLSTC(Carbamidomethyl (C))KDSK_	ENSG00000231925|ENST00000434618|TAPBP;nc|ENSG00000231925|O15533-3|TAPBP;nc|ENSG00000231925|O15533-4|TAPBP	58.2462437865262	0.33910980880557884	6				NaN	NaN	0	NaN	3799	2750	6546
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6552	20.564	NaN	4580.8	30	0	765.48	0.106	+			45730	VACGSAHTL	9	62	458.22098583607516	NaN	0	458.2209777832031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_VAC(Carbamidomethyl (C))GSAHTL_	ENSG00000128731|ENST00000261609|HERC2;HERC2|p.N4304S|1|0.12|ENSG00000128731|chr15:28125085-28125085|T/C|missense_variant	82.30502934623384	0.06348534290027165	6				NaN	NaN	0	NaN	3800	2750	6546
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6553	20.566	NaN	105580	30	0	95297	0.037	+			8249	EAFRGVHRY	9	62	378.864694594392	1133.572254383376	3	378.8649597167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EAFRGVHRY_	ENSG00000213719|ENST00000375784|CLIC1	38.80614096846853	0.43426287593479557	6				NaN	NaN	0	NaN	3801	2750	6546
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6571	20.602	NaN	65922	30	0	27985	0.214	+			35522	SAVFLSFKSPI	11	79	399.2271399384418	1194.6595904155254	3	399.2274475097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAVFLSFKSPI_	ENSG00000198945|ENST00000361794|L3MBTL3;nc|ENSG00000198945|Q96JM7-2|L3MBTL3	42.33807565288922	0.5259510355945483	6				NaN	NaN	0	NaN	3816	2753	6570
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6572	20.605	NaN	15708	30	0	2770.6	0.106	+			8250	EAFRGVHRY	9	81	567.7940255644272	NaN	0	567.7938842773438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EAFRGVHRY_	ENSG00000213719|ENST00000375784|CLIC1	79.45101966838831	0.07326487554222888	6				NaN	NaN	0	NaN	3817	2753	6570
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6573	20.608	NaN	41228	30	0	9219	0.106				-1	 	0	93	441.73717752289514	881.4598021125903	2	441.73736572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3818	2753	6570
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6574	20.609	NaN	68869	30	0	14322	0.106				-1	 	0	107	493.7557040140276	985.4968550948552	2	493.7561340332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3819	2753	6570
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6575	20.611	NaN	13953	30	0	3076.3	0.106	+			24407	LGAGSAPGPLV	11	72	469.768325691579	937.522098449958	2	469.7685852050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LGAGSAPGPLV_	ENST00000360315.7_1_19:19616542-19616689:+|nuORF	51.33545320467046	0.40283943988558196	6				NaN	NaN	0	NaN	3820	2753	6570
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6576	20.613	NaN	6982.4	30	0	734.76	0.035	+			34726	RVYGGLTTK	9	68	497.7865868827123	993.5586208322246	2	497.7871398925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RVYGGLTTK_	ENSG00000170248|ENST00000307296|PDCD6IP;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	3821	2753	6570
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6577	20.614	NaN	10728	30	0	2032.9	0.139	+			24	AAAGQQVPGF	10	78	473.244076237435	944.4735995416701	2	473.2445373535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AAAGQQVPGF_	ENSG00000204463|ENST00000676615|BAG6	45.9519527083369	0.4943008177357963	6				NaN	NaN	0	NaN	3822	2753	6570
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6595	20.651	NaN	33180	30	0	11971	0.214	+			36422	SETTAAHSL	9	83	458.72154893473754	915.4285449362751	2	458.7220153808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SETTAAHSL_	ENSG00000119408|ENST00000320246|NEK6;nc|ENSG00000119408|Q9HC98-2|NEK6;nc|ENSG00000119408|Q9HC98-3|NEK6;nc|ENSG00000119408|Q9HC98-4|NEK6	93.19546047674547	0.05585629608842056	6				NaN	NaN	0	NaN	3837	2756	6594
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6596	20.655	NaN	9145.4	30	0	1669.7	0.106				-1	 	0	74	485.2713514867993	968.5281500403986	2	485.27178955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3838	2756	6594
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6597	20.657	NaN	15434	30	0	2205.9	0.106			+	29510	PDMQRFLQ	8	84	517.7597699394051	1033.5049869456102	2	517.7597045898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PDMQRFLQ_	REV__ENST00000175756.9_1_2:131131718-131131856:+|nuORF	51.33545320467046	0.5859736979383976	6				NaN	NaN	0	NaN	3839	2756	6594
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6598	20.659	NaN	11371	30	0	998.67	0.106	+			12537	GEGDGRTAL	9	67	438.21402831790664	874.4135037026133	2	438.21435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEGDGRTAL_	ENSG00000157985|ENST00000304032|AGAP1;ENST00000453371.2_1_2:236954608-237032763:+|nuORF;nc|ENSG00000157985|Q9UPQ3-2|AGAP1	80.45461616416974	0.09558281504443908	6				NaN	NaN	0	NaN	3840	2756	6594
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6599	20.661	NaN	17967	30	0	2611	0.106	+			44135	TQATIYVHK	9	87	354.1977097269719	NaN	0	354.1977233886719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TQATIYVHK_	ENSG00000090686|ENST00000308271|USP48;nc|ENSG00000090686|Q86UV5-2|USP48;nc|ENSG00000090686|Q86UV5-5|USP48;nc|ENSG00000090686|Q86UV5-8|USP48;USP48|p.L982Ffs*9|1|0.08|ENSG00000090686|chr1:21690037-21690038|-/GG|frameshift_variant	75.04331003522576	0.0883683072398826	6				NaN	NaN	0	NaN	3841	2756	6594
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6600	20.662	NaN	9224.7	30	0	627.58	0.034	+			23	AAAGPSCALK	10	84	473.244076237435	944.4735995416701	2	473.7457275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_AAAGPSC(Carbamidomethyl (C))ALK_	ENSG00000125968|ENST00000376112|ID1;ID1|p.G120Afs*20|1|0.38|ENSG00000125968|chr20:31605737-31605737|C/-|frameshift_variant;nc|ENSG00000125968|P41134-2|ID1	52.936696900407355	0.4300801048568001	6				NaN	NaN	0	NaN	3842	2756	6594
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6601	20.663	NaN	3559.5	30	0	402.61	0.141	+			34674	RVSEVLQNR	9	76	550.811599889879	1099.6086468465578	2	550.8126220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RVSEVLQNR_	ENSG00000197586|ENST00000376652|ENTPD6;ENST00000471478.1_1_20:25196340-25204798:+|nuORF;ENST00000485936.5_1_20:25203457-25206230:+|nuORF;nc|ENSG00000197586|O75354-2|ENTPD6;nc|ENSG00000197586|O75354-3|ENTPD6	54.722347961057174	0.257609425301511	6				NaN	NaN	0	NaN	3843	2756	6594
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6619	20.702	NaN	24507	30	0	6109.9	0.214				-1	 	0	74	458.75799028222104	915.5014276312421	2	458.7583312988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3858	2759	6618
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6620	20.706	NaN	52017	30	0	36967	0.106	+			45885	VAPEEHPV	8	71	439.22411754161436	876.4336821500287	2	439.2240905761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VAPEEHPV_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;POTEF|p.L804P|1|0.35|ENSG00000196604|chr2:130075061-130075061|A/G|missense_variant	83.28718786952967	0.2977916691876266	6				NaN	NaN	0	NaN	3859	2759	6618
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6621	20.708	NaN	42478	30	0	3585.6	0.106	+			34318	RTMSEAALVRK	11	106	421.2390850233967	1260.69542567039	3	421.2395935058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RTMSEAALVRK_	ENSG00000169435|ENST00000307439|RASSF6;nc|ENSG00000169435|Q6ZTQ3-3|RASSF6;nc|ENSG00000169435|Q6ZTQ3-4|RASSF6;nc|ENSG00000169435|Q6ZTQ3|RASSF6;RASSF6|p.K253Nfs*25|1|0.16|ENSG00000169435|chr4:73582195-73582195|T/-|frameshift_variant	174.5707711675491	1.5947108423581004E-05	6				NaN	NaN	0	NaN	3860	2759	6618
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6622	20.71	NaN	16009	30	0	3405.4	0.106	+			11067	FESSQWNIK	9	68	380.18890193908794	1137.544876417464	3	380.1889953613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FESSQWNIK_	ENSG00000198003|ENST00000356392|ODAD3;ENST00000593281.1_1_19:11541422-11545627:-|nuORF;nc|ENSG00000198003|A5D8V7-2|ODAD3	38.80614096846853	0.43426287593479557	6				NaN	NaN	0	NaN	3861	2759	6618
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6623	20.712	NaN	22777	30	0	8193.4	0.106			+	28479	NGEREHGLQG	10	86	548.7592276433804	1095.5039023535608	2	548.7601318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NGEREHGLQG_	REV__ENSG00000138641|ENST00000402738|HERC3;REV__nc|ENSG00000287542|Q15034-2|HERC3	80.45461616416974	0.1919067876629769	6				NaN	NaN	0	NaN	3862	2759	6618
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6624	20.714	NaN	16519	30	0	2114.5	0.037				-1	 	0	89	371.87308288692316	1112.5974192609694	3	371.8732604980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3863	2759	6618
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6625	20.714	NaN	6934.9	30	0	2156.7	0.141				-1	LDFFLIMC	8	59	558.7574265013615	1115.5003000695228	2	558.75830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term),Carbamidomethyl (C),Oxidation (M)	_(Acetyl (Protein N-term))LDFFLIM(Oxidation (M))C(Carbamidomethyl (C))_	ENST00000490738.5_1_1:6931838-6931883:+|nuORF	29.841539824830324	0.7289191502596711	6				NaN	NaN	0	NaN	3864	2759	6618
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6643	20.753	NaN	81760	30	0	33194	0.214				-1	 	0	77	425.2370737098689	848.4595944865379	2	425.23748779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3879	2762	6642
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6644	20.756	NaN	17093	30	0	4430.8	0.106	+			29009	NSPEKACSL	9	80	503.2364187570329	1004.4582845808658	2	503.23736572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_NSPEKAC(Carbamidomethyl (C))SL_	ENSG00000164924|ENST00000395958|YWHAZ;ENSG00000166913|ENST00000353703|YWHAB;ENST00000399764.3_1_9:34922183-34922564:-|nuORF;ENST00000445359.1_1_9:38643302-38643692:+|nuORF;ENST00000479421.5_2_20:43531717-43535076:+|nuORF;ENST00000480304.5_1_8:101936173-101961117:-|nuORF;ENST00000517727.5_1_8:101936341-101962760:-|nuORF;nc|ENSG00000164924|P63104-2|YWHAZ;nc|ENSG00000166913|P31946-2|YWHAB	74.1650062923329	0.12277912660386392	6				NaN	NaN	0	NaN	3880	2762	6642
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6645	20.758	NaN	13835	30	0	2835.8	0.106	+			22133	KSPEKDVPM	9	72	515.7649943882614	1029.5154358433226	2	515.7659912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KSPEKDVPM_	ENSG00000065000|ENST00000643116|AP3D1;nc|ENSG00000065000|O14617-2|AP3D1;nc|ENSG00000065000|O14617-3|AP3D1;nc|ENSG00000065000|O14617|AP3D1	93.1432384553994	0.056003526918089595	6				NaN	NaN	0	NaN	3881	2762	6642
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6646	20.76	NaN	20391	30	0	3838.7	0.106	+			40659	SVARIAKLEK	10	94	372.2363945993096	NaN	0	372.2363586425781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVARIAKLEK_	ENSG00000148303|ENST00000323345|RPL7A;ENST00000463740.5_1_9:136217403-136218218:+|nuORF;ENST00000468834.1_1_10:33346560-33347304:-|nuORF;ENST00000482859.1_1_4:113709241-113709472:-|nuORF;ENST00000492798.1_1_9:136217794-136218218:+|nuORF	49.46582953369473	0.30897958348462834	6				NaN	NaN	0	NaN	3882	2762	6642
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6647	20.762	NaN	28889	30	0	4100.2	0.106	+			36294	SEREMRNTL	9	93	568.2795259955118	1134.5444990578235	2	568.2806396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SEREMRNTL_	ENSG00000113810|ENST00000357388|SMC4;ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4	98.58198989935565	0.04066992115528678	6				NaN	NaN	0	NaN	3883	2762	6642
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6648	20.764	NaN	28780	30	0	10205	0.037	+			36295	SEREMRNTL	9	64	379.1887424693491	1134.5443980082473	3	379.18896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SEREMRNTL_	ENSG00000113810|ENST00000357388|SMC4;ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4	31.529811441608018	0.5085848003137583	6				NaN	NaN	0	NaN	3884	2762	6642
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6649	20.764	NaN	10473	30	0	3886.2	0.143			+	-1	TVAMALPPEMQ	11	73	401.863081682167	1202.567415646701	3	401.86328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_TVAMALPPEM(Oxidation (M))Q_	REV__ENSG00000130287|ENST00000252575|NCAN;REV__ENST00000590187.2_1_19:19337677-19349276:+|nuORF	28.5767321226876	0.690044582712672	6				NaN	NaN	0	NaN	3885	2762	6642
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6667	20.804	NaN	186700	30	0	42810	0.214	+			5533	AVAIKAMAK	9	104	451.77762014605827	901.5406873589166	2	451.7782897949219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVAIKAMAK_	EIF5A|p.A145P|1|0.15|ENSG00000132507|chr17:7311608-7311608|G/C|missense_variant;ENSG00000132507|ENST00000336458|EIF5A;ENSG00000253626|ENST00000520547|EIF5AL1;nc|ENSG00000132507|P63241-2|EIF5A	129.68262048586715	0.015338143639892752	6				NaN	NaN	0	NaN	3900	2765	6666
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6668	20.807	NaN	17039	30	0	1846.6	0.106	+			20889	KIQETFAQK	9	78	546.8058554345353	1091.5971579358704	2	546.8069458007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KIQETFAQK_	ENST00000519940.5_1_19:48735037-48741646:-|nuORF	177.3047273071476	0.0015666121956477066	6				NaN	NaN	0	NaN	3901	2765	6666
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6669	20.81	NaN	16635	30	0	3048	0.106	+			19344	KAKLHAAEK	9	82	498.30428049915054	994.5940080651011	2	498.30487060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KAKLHAAEK_	ENSG00000197381|ENST00000348831|ADARB1;nc|ENSG00000197381|P78563-3|ADARB1;nc|ENSG00000197381|P78563-4|ADARB1;nc|ENSG00000197381|P78563-5|ADARB1;nc|ENSG00000197381|P78563-6|ADARB1;nc|ENSG00000197381|P78563|ADARB1	66.96192283764107	0.15557981141143568	6				NaN	NaN	0	NaN	3902	2765	6666
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6670	20.811	NaN	8907.9	30	0	912.18	0.106	+			48824	VVAQTKAISG	10	77	487.2877197265625	NaN	0	487.2877197265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVAQTKAISG_	ENSG00000275395|ENST00000616721|FCGBP;FCGBP-ACSS2|1|fusion;nc|ENSG00000275395|Q9Y6R7|FCGBP	56.43379154798735	0.2634004003759929	6				NaN	NaN	0	NaN	3903	2765	6666
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6671	20.813	NaN	12567	30	0	3522.2	0.106	+			3013	ASFDKAKLK	9	80	504.2980070371954	1006.5814611411909	2	504.2982177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASFDKAKLK_	ENSG00000034510|ENST00000233143|TMSB10	80.45461616416974	0.09558281504443908	6				NaN	NaN	0	NaN	3904	2765	6666
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6672	20.815	NaN	72692	30	0	18642	0.039			+	5364	ATWCVPILVLI	11	65	409.91008313608654	1226.7084200084596	3	409.9106140136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATWCVPILVLI_	REV__ENSG00000213937|ENST00000445369|CLDN9	38.753607047826485	0.5749975102143227	6				NaN	NaN	0	NaN	3905	2765	6666
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6673	20.816	NaN	37634	30	0	22845	0.141	+			19295	KAFVGAFKK	9	84	332.53954176419074	NaN	0	332.5394287109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KAFVGAFKK_	ENSG00000160796|ENST00000450053|NBEAL2;NBEAL2|p.C1705Vfs*45|1|0.24|ENSG00000160796|chr3:47002246-47002246|T/-|frameshift_variant;NBEAL2|p.P1303Lfs*63|1|0.21|ENSG00000160796|chr3:47000002-47000002|C/-|frameshift_variant;NBEAL2|p.Y1346Tfs*20|1|0.44|ENSG00000160796|chr3:47000132-47000132|T/-|frameshift_variant;nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2;nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2	124.08010499294276	0.0015010289275841425	6				NaN	NaN	0	NaN	3906	2765	6666
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6693	20.854	NaN	410860	30	0	55076	0.146	+			47522	VQNGKHFKF	9	115	368.86939129686334	1103.58634449079	3	368.8699035644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VQNGKHFKF_	ENSG00000163586|ENST00000295834|FABP1	79.71258880314673	0.09879134589249085	6				NaN	NaN	0	NaN	3923	2768	6692
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6694	20.856	NaN	64512	30	0	14093	0.106				-1	 	0	102	473.7631684774737	945.5117840217474	2	473.76361083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3924	2768	6692
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6695	20.858	NaN	26750	30	0	7052.5	0.106	+			4812	ATNTSAPDLK	10	81	509.26378664109717	1016.5130203489944	2	509.2643737792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATNTSAPDLK_	ENSG00000047849|ENST00000683076|MAP4;MAP4|p.T960Qfs*35|1|0.3|ENSG00000047849|chr3:47869309-47869309|T/-|frameshift_variant;MAP4|p.V999*|1|0.25|ENSG00000047849|chr3:47867318-47867318|T/-|frameshift_variant;nc|ENSG00000047849|P27816-2|MAP4;nc|ENSG00000047849|P27816-4|MAP4;nc|ENSG00000047849|P27816-5|MAP4;nc|ENSG00000047849|P27816-6|MAP4;nc|ENSG00000047849|P27816|MAP4	97.59673978297657	0.0875810153152853	6				NaN	NaN	0	NaN	3925	2768	6692
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6696	20.86	NaN	8107.4	30	0	1375.4	0.106			+	7243	DALLRHLV	8	72	468.7845212833497	935.5544896334994	2	468.78472900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DALLRHLV_	REV__ENST00000220062.8_1_15:65345900-65346110:-|nuORF	42.47446043378293	0.6409579893742323	6				NaN	NaN	0	NaN	3926	2768	6692
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6697	20.862	NaN	10547	30	0	1990.8	0.106	+			33177	REVAGHTEQL	10	79	570.293455864318	1138.572358795436	2	570.2943115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_REVAGHTEQL_	CON__P08727;ENSG00000171345|ENST00000361566|KRT19;ENST00000468880.1_1_17:39680334-39681232:-|nuORF;ENST00000471565.2_1_17:39680334-39680852:-|nuORF	102.0615471778698	0.07157459376830236	6				NaN	NaN	0	NaN	3927	2768	6692
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6698	20.864	NaN	128600	30	0	43393	0.106			+	44162	TQPIHTTVKPS	11	98	403.5590195576825	1207.6552292732476	3	403.5594482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TQPIHTTVKPS_	REV__ENSG00000165632|ENST00000344293|TAF3	35.15202426646627	0.6210751305041943	6				NaN	NaN	0	NaN	3928	2768	6692
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6699	20.865	NaN	21079	30	0	4264.5	0.035	+			48586	VTQNGGLYK	9	79	490.2635898908474	978.5126268484948	2	490.26385498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VTQNGGLYK_	ENSG00000100596|ENST00000216484|SPTLC2	140.11223852658463	0.010427410095706195	6				NaN	NaN	0	NaN	3929	2768	6692
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6717	20.902	NaN	713300	30	0	323220	0.214				-1	 	0	123	384.771786926274	767.529020919348	2	384.77203369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3944	2771	6716
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6718	20.905	NaN	84159	30	0	19251	0.106			+	-1	AVSSCVMK	8	90	449.21218812524086	NaN	0	449.2123107910156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_AVSSC(Carbamidomethyl (C))VM(Oxidation (M))K_	REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-10|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-13|TTN;REV__nc|ENSG00000155657|Q8WZ42-2|TTN;REV__nc|ENSG00000155657|Q8WZ42-3|TTN;REV__nc|ENSG00000155657|Q8WZ42-4|TTN;REV__nc|ENSG00000155657|Q8WZ42-5|TTN;REV__nc|ENSG00000155657|Q8WZ42-7|TTN;REV__nc|ENSG00000155657|Q8WZ42-8|TTN;REV__nc|ENSG00000155657|Q8WZ42-9|TTN;REV__nc|ENSG00000155657|Q8WZ42|TTN;REV__TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;REV__TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;REV__TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;REV__TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;REV__TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;REV__TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant	60.97194046774394	1.7418937515398478	6				NaN	NaN	0	NaN	3945	2771	6716
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6719	20.908	NaN	27721	30	0	2801.4	0.106	+			21729	KQLEDGRTL	9	83	530.2933731872873	NaN	0	530.2936401367188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KQLEDGRTL_	ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000399822.2_1_9:22012279-22012411:+|nuORF;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;UBB|p.D191Tfs*35|2|0.18|ENSG00000170315|chr17:16382471-16382471|C/-|frameshift_variant;UBB|p.D191Tfs*35|2|0.18|ENSG00000170315|chr17:16382471-16382471|C/-|frameshift_variant	96.0336014099291	0.029433397039169355	6				NaN	NaN	0	NaN	3946	2771	6716
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6720	20.909	NaN	17575	30	0	10217	0.106	+			25102	LLPIVHSTKN	10	55	374.5604592469267	1120.65954834098	3	374.56072998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LLPIVHSTKN_	ENSG00000146856|ENST00000436302|AGBL3;nc|ENSG00000146856|Q8NEM8|AGBL3	26.69291269510374	0.6618461711292317	6				NaN	NaN	0	NaN	3947	2771	6716
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6721	20.911	NaN	16061	30	0	3002.9	0.106	+			46348	VEKPAETHL	9	71	512.2756421301609	1022.5367313271219	2	512.2767944335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VEKPAETHL_	ENSG00000198171|ENST00000354488|DDRGK1;nc|ENSG00000198171|Q96HY6-2|DDRGK1	109.47833844074708	0.029530294723441826	6				NaN	NaN	0	NaN	3948	2771	6716
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6722	20.913	NaN	17328	30	0	2358.5	0.037	+			47333	VPCWQSYPKG	10	74	582.7794398960569	1163.5443268589138	2	582.7805786132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VPCWQSYPKG_	ENST00000481445.1_1_X:77158242-77160802:+|nuORF	90.36981228632155	0.12895663264417576	6				NaN	NaN	0	NaN	3949	2771	6716
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6723	20.914	NaN	6042.4	30	0	850.54	0.147				-1	QICLFLRKEK	10	69	445.59175289875867	NaN	0	445.5918273925781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_QIC(Carbamidomethyl (C))LFLRKEK_	ENST00000325279.4_1_16:84696604-84696697:+|nuORF	29.550750289552195	0.40314579734438066	6				NaN	NaN	0	NaN	3950	2771	6716
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6742	20.953	NaN	362530	30	0	55696	0.122	+			6079	AVNAHSNILK	10	112	533.8037678815066	NaN	0	533.8038940429688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVNAHSNILK_	ENSG00000132305|ENST00000410111|IMMT;ENST00000409258.2_1_2:86386442-86398424:-|nuORF;ENST00000435590.1_1_21:46097057-46097849:-|nuORF;ENST00000474969.5_1_2:86385703-86422514:-|nuORF;ENST00000490238.5_1_2:86389097-86393741:-|nuORF;nc|ENSG00000132305|Q16891-2|IMMT;nc|ENSG00000132305|Q16891-3|IMMT;nc|ENSG00000132305|Q16891-4|IMMT	133.9934435666947	0.012545166328792606	6				NaN	NaN	0	NaN	3966	2774	6741
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6743	20.955	NaN	77642	30	0	18581	0.086				-1	 	0	82	450.2628074568696	898.5110619805392	2	450.26318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3967	2774	6741
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6744	20.957	NaN	257160	30	0	164710	0.106			+	25606	LQLHNNSIK	9	106	356.2042813590791	1065.5910146774374	3	356.20489501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LQLHNNSIK_	REV__ENST00000409784.7_1_2:65318132-65325105:-|nuORF	54.776311868738084	0.25715957988447635	6				NaN	NaN	0	NaN	3968	2774	6741
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6745	20.959	NaN	13814	30	0	4244.4	0.106	+			39155	SSVPYSTAK	9	74	470.24198570088083	938.4694184685617	2	470.24249267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSVPYSTAK_	ENSG00000126883|ENST00000359428|NUP214;ENST00000525980.5_1_9:134025776-134070755:+|nuORF;nc|ENSG00000126883|P35658-2|NUP214;nc|ENSG00000126883|P35658-3|NUP214;nc|ENSG00000126883|P35658-4|NUP214;NUP214|p.P1285Rfs*3|1|0.28|ENSG00000126883|chr9:131197346-131197359|CCCAGGAGAACCTG/-|frameshift_variant	70.8162118820467	0.13725933411854815	6				NaN	NaN	0	NaN	3969	2774	6741
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6746	20.961	NaN	15726	30	0	8646	0.106	+			34642	RVQEAVESMVK	11	86	646.3378493052732	1290.6611456773462	2	646.3372192382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_RVQEAVESM(Oxidation (M))VK_	ENSG00000035141|ENST00000430566|FAM136A;ENST00000460307.1_1_2:70528513-70529143:-|nuORF;ENST00000498665.1_1_2:70527944-70529143:-|nuORF;nc|ENSG00000035141|Q96C01|FAM136A	106.15719557519877	0.04795798448229554	6				NaN	NaN	0	NaN	3970	2774	6741
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6747	20.962	NaN	17269	30	0	2717.9	0.106	+			43969	TPEMLPVK	8	96	465.7516968301552	929.4888407271104	2	465.7533264160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_TPEM(Oxidation (M))LPVK_	DOCK8|p.E1615Dfs*7|1|0.05|ENSG00000107099|chr9:433933-433934|-/C|frameshift_variant;DOCK8|p.F547Cfs*51|1|0.09|ENSG00000107099|chr9:340281-340282|-/GTTCTAG|frameshift_variant;DOCK8|p.M1114Yfs*4|1|0.4|ENSG00000107099|chr9:405014-405015|-/T|frameshift_variant;DOCK8|p.P952Qfs*24|1|0.35|ENSG00000107099|chr9:386404-386404|C/-|frameshift_variant;ENSG00000107099|ENST00000432829|DOCK8;ENST00000454469.6_1_9:214976-340322:+|nuORF;ENST00000495184.5_1_9:286487-368312:+|nuORF;nc|ENSG00000107099|Q8NF50-2|DOCK8;nc|ENSG00000107099|Q8NF50-3|DOCK8;nc|ENSG00000107099|Q8NF50-4|DOCK8	60.97194046774394	0.49215940876911696	6				NaN	NaN	0	NaN	3971	2774	6741
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6748	20.964	NaN	54174	30	0	11460	0.036	+			16145	HEAEGHIVTC	10	83	548.2470911024623	1094.4796292717244	2	548.2481079101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HEAEGHIVTC_	ENSG00000100028|ENST00000215829|SNRPD3;ENST00000468770.1_1_22:24953642-24953888:+|nuORF;nc|ENSG00000286070|P62318-2|SNRPD3	134.81075121484326	0.012137651332351585	6				NaN	NaN	0	NaN	3972	2774	6741
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6749	20.965	NaN	88990	30	0	35492	0.144				-1	 	0	60	346.8568567948233	1037.5487409846698	3	346.8573303222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3973	2774	6741
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6767	21.002	NaN	50508	30	0	6885	0.214			+	10072	ESIEAGKSKL	10	96	531.2947882745171	1060.5750236158342	2	531.2955322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ESIEAGKSKL_	REV__EIF3M|p.K161Sfs*5|2|0.14|ENSG00000149100|chr11:32589584-32589584|A/-|frameshift_variant;REV__ENSG00000149100|ENST00000531120|EIF3M;REV__ENST00000531186.5_1_11:32605433-32610279:+|nuORF	102.0615471778698	0.07157459376830236	6				NaN	NaN	0	NaN	3988	2777	6766
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6768	21.005	NaN	14510	30	0	1393	0.106	+			11145	FGGLGSKSK	9	83	440.74772137261533	NaN	0	440.7477722167969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FGGLGSKSK_	ENSG00000124942|ENST00000378024|AHNAK	112.41091882917199	0.007519870935348052	6				NaN	NaN	0	NaN	3989	2777	6766
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6769	21.007	NaN	8239	30	0	1049.6	0.106				-1	 	0	64	340.8532500562733	1019.5379207690198	3	340.853759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3990	2777	6766
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6770	21.009	NaN	23445	30	0	7526.2	0.106			+	50149	WKCDKITK	8	85	511.2790492106491	1020.5435454880982	2	511.2796936035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_WKCDKITK_	REV__ENSG00000161654|ENST00000293406|LSM12;REV__nc|ENSG00000161654|Q3MHD2-2|LSM12	67.49366992349736	0.4277823096851425	6				NaN	NaN	0	NaN	3991	2777	6766
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6771	21.011	NaN	7633.9	30	0	1766.1	0.106				-1	 	0	81	499.7116647957532	997.4087766583065	2	499.7122497558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3992	2777	6766
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6772	21.013	NaN	5845.2	30	0	676.39	0.038			+	26244	LSSRRLSLEL	10	72	391.9028963906158	1172.6868597720475	3	391.9031982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSSRRLSLEL_	REV__ENSG00000165115|ENST00000297814|KIF27;REV__nc|ENSG00000165115|Q86VH2-2|KIF27;REV__nc|ENSG00000165115|Q86VH2-3|KIF27	30.568863376406313	0.6301935916953115	6				NaN	NaN	0	NaN	3993	2777	6766
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6773	21.013	NaN	8317.2	30	0	2988.6	0.138	+			94	AADCAHEL	8	71	443.68899974637463	885.3634465595493	2	443.68951416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_AADC(Carbamidomethyl (C))AHEL_	ENSG00000157379|ENST00000288111|DHRS1;ENST00000558340.1_1_14:24760067-24761569:-|nuORF;ENST00000561137.5_1_14:24760413-24761527:-|nuORF;ENST00000561273.5_1_14:24760714-24761569:-|nuORF	55.50420428727701	0.5462892107279674	6				NaN	NaN	0	NaN	3994	2777	6766
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6791	21.053	NaN	17413	30	0	3525.1	0.214	+			35638	SCGPPGMTK	9	75	439.1980393620502	876.3815257909005	2	439.19866943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SCGPPGMTK_	ENSG00000137857|ENST00000389037|DUOX1;ENSG00000140279|ENST00000389039|DUOX2;ENST00000561220.6_1_15:45434150-45457096:+|nuORF;nc|ENSG00000137857|Q9NRD9-2|DUOX1;nc|ENSG00000140279|Q9NRD8|DUOX2	101.25262130126117	0.03792372629710479	6				NaN	NaN	0	NaN	4009	2780	6790
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6792	21.056	NaN	10859	30	0	1171.1	0.106			+	47631	VSAPRHRQK	9	58	360.2128684177661	1077.6167758534984	3	360.21319580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSAPRHRQK_	REV__ENSG00000166159|ENST00000299194|LRTM2	24.519189625965996	0.574102787014149	6				NaN	NaN	0	NaN	4010	2780	6790
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6793	21.058	NaN	10413	30	0	2279.8	0.106	+			22470	KTMDVSKVKLK	11	81	426.25948450363524	1275.7566241111058	3	426.26007080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KTMDVSKVKLK_	ENSG00000084093|ENST00000309042|REST;nc|ENSG00000084093|Q13127-4|REST;REST|p.P976Lfs*4|1|0.19|ENSG00000084093|chr4:56931781-56931781|C/-|frameshift_variant;REST|p.S578Vfs*7|3|0.26|ENSG00000084093|chr4:56930584-56930584|A/-|frameshift_variant	55.25784877116998	0.3657853465628108	6				NaN	NaN	0	NaN	4011	2780	6790
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6794	21.06	NaN	9976.5	30	0	796.3	0.106	+			27806	MSGPLSPRR	9	89	500.7699258421198	999.5252987510396	2	500.771240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MSGPLSPRR_	ENST00000474874.5_1_1:8086278-8086305:-|nuORF	85.16082228582465	0.07850854922700509	6				NaN	NaN	0	NaN	4012	2780	6790
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6795	21.062	NaN	11846	30	0	5689.1	0.106			+	25903	LSGGTLDKP	9	68	444.2448247579631	886.4750965827262	2	444.2451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSGGTLDKP_	REV__ENSG00000101115|ENST00000217086|SALL4;REV__SALL4|p.N742*|1|0.36|ENSG00000101115|chr20:51790263-51790264|-/G|frameshift_variant	30.317721548370564	0.5199124245378496	6				NaN	NaN	0	NaN	4013	2780	6790
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6796	21.064	NaN	8216.6	30	0	1604.5	0.034	+			18260	IPDTEDEI	8	81	466.21644700390385	930.4183410746077	2	466.216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IPDTEDEI_	CRBN|p.T425M|1|0.39|ENSG00000113851|chr3:3150920-3150920|G/A|missense_variant;ENSG00000113851|ENST00000231948|CRBN;ENST00000459840.5_1_3:3192551-3196584:-|nuORF;nc|ENSG00000113851|Q96SW2-2|CRBN	35.200714571348534	0.6875396545722289	6				NaN	NaN	0	NaN	4014	2780	6790
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6797	21.064	NaN	4684.9	30	0	1374.6	0.143	+			38678	SSIRRHRI	8	46	342.2092038470676	1023.6057821414029	3	342.2095947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSIRRHRI_	ENSG00000257591|ENST00000439556|ZNF625;nc|ENSG00000257591|Q96I27|ZNF625	14.664097394203935	0.7913966407026132	6				NaN	NaN	0	NaN	4015	2780	6790
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6815	21.104	NaN	414440	30	0	46838	0.158				-1	 	0	122	536.8026290084738	1071.5907050837475	2	536.8035888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4030	2783	6814
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6816	21.106	NaN	602390	30	0	209250	0.106				-1	 	0	141	358.2042278718749	1071.5908542158247	3	358.2046203613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4031	2783	6814
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6817	21.109	NaN	32684	30	0	3688.2	0.106	+			33441	RILACGVAK	9	82	494.2913308574047	986.5681087816095	2	494.2918395996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_RILAC(Carbamidomethyl (C))GVAK_	ENSG00000265972|ENST00000582401|TXNIP	118.74307786436346	0.02196067127630568	6				NaN	NaN	0	NaN	4032	2783	6814
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6818	21.11	NaN	62362	30	0	21711	0.106	+			20792	KIADMGHLK	9	97	338.19109713549835	1011.5514620066951	3	338.19171142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KIADMGHLK_	ENSG00000132646|ENST00000379143|PCNA	80.45461616416974	0.09558281504443908	6				NaN	NaN	0	NaN	4033	2783	6814
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6819	21.112	NaN	17154	30	0	2856.2	0.106	+			20793	KIADMGHLK	9	79	506.78349060611805	1011.5524282790361	2	506.7839660644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KIADMGHLK_	ENSG00000132646|ENST00000379143|PCNA	120.30596017624542	0.02101454110788768	6				NaN	NaN	0	NaN	4034	2783	6814
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6820	21.114	NaN	40361	30	0	6647	0.106	+			40648	SVAQTVVQK	9	88	480.27940854065065	NaN	0	480.27935791015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVAQTVVQK_	ENSG00000057294|ENST00000340811|PKP2;nc|ENSG00000057294|Q99959|PKP2	173.39201167336012	0.008248577113963734	6				NaN	NaN	0	NaN	4035	2783	6814
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6821	21.116	NaN	73605	30	0	30551	0.036	+			3522	ASSLPTLSHPA	11	79	360.8608970259386	1079.5608616780157	3	360.8614501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASSLPTLSHPA_	ENST00000451737.1_1_10:96990486-96990897:-|nuORF	26.69291269510374	0.70980431218767	6				NaN	NaN	0	NaN	4036	2783	6814
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6839	21.152	NaN	208930	30	0	34818	0.214				-1	 	0	121	405.7448104367128	809.4750679402256	2	405.7450256347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4051	2786	6838
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6840	21.155	NaN	22945	30	0	4213.8	0.056				-1	 	0	81	436.7628403293459	871.5111277254919	2	436.7631530761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4052	2786	6838
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6841	21.157	NaN	80262	30	0	19484	0.106	+			49780	VYQNHVQHL	9	81	379.8646439009691	1136.5721023031074	3	379.8648986816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYQNHVQHL_	ARHGAP5|p.E893*|2|0.24|ENSG00000100852|chr14:32093338-32093339|-/T|frameshift_variant;ARHGAP5|p.F892Lfs*9|2|0.33|ENSG00000100852|chr14:32093339-32093339|T/-|frameshift_variant;ARHGAP5|p.F935Lfs*5|1|0.32|ENSG00000100852|chr14:32093469-32093469|T/-|frameshift_variant;ARHGAP5|p.N943Kfs*10|1|0.43|ENSG00000100852|chr14:32093489-32093490|-/A|frameshift_variant;ARHGAP5|p.S936*|1|0.32|ENSG00000100852|chr14:32093468-32093469|-/T|frameshift_variant;ARHGAP5|p.Y502Mfs*3|1|0.31|ENSG00000100852|chr14:32092168-32092168|T/-|frameshift_variant;ENSG00000100852|ENST00000345122|ARHGAP5;nc|ENSG00000100852|Q13017-2|ARHGAP5	47.91560031466742	0.327412564698279	6				NaN	NaN	0	NaN	4053	2786	6838
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6842	21.158	NaN	26085	30	0	12911	0.106	+			9879	EQIIKGSKDV	10	74	558.8156177487296	1115.616682564259	2	558.8162231445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EQIIKGSKDV_	CNTLN|p.C821Lfs*2|1|0.17|ENSG00000044459|chr9:17394913-17394914|-/T|frameshift_variant;CNTLN|p.I1388Nfs*3|1|0.3|ENSG00000044459|chr9:17502587-17502588|-/A|frameshift_variant;CNTLN|p.K1130Rfs*14|1|0.25|ENSG00000044459|chr9:17462996-17462996|A/-|frameshift_variant;CNTLN|p.M1308*|1|0.36|ENSG00000044459|chr9:17484355-17484355|A/-|frameshift_variant;CNTLN|p.M1308Nfs*9|1|0.46|ENSG00000044459|chr9:17484354-17484355|-/A|frameshift_variant;CNTLN|p.T1324Dfs*27|1|0.14|ENSG00000044459|chr9:17484406-17484407|-/A|frameshift_variant;ENSG00000044459|ENST00000380647|CNTLN;nc|ENSG00000044459|Q9NXG0|CNTLN	96.0336014099291	0.09653029772959643	6				NaN	NaN	0	NaN	4054	2786	6838
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6843	21.16	NaN	9804.1	30	0	870.25	0.106	+			40902	SVFNHAIRH	9	76	540.7878752456373	1079.5611975580746	2	540.7886962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVFNHAIRH_	ENSG00000273749|ENST00000617928|CYFIP1;KBTBD2-CYFIP1|1|fusion	80.45461616416974	0.09558281504443908	6				NaN	NaN	0	NaN	4055	2786	6838
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6844	21.162	NaN	9770.1	30	0	1309.3	0.106	+			3577	ASVDLKNTG	9	81	452.7396072307426	903.4646615282852	2	452.7405090332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASVDLKNTG_	ENSG00000275395|ENST00000616721|FCGBP;FCGBP-ACSS2|1|fusion;FCGBP|p.G150Afs*25|1|0.19|ENSG00000275395|chr19:39927915-39927915|G/-|frameshift_variant;FCGBP|p.Q22K|1|0.08|ENSG00000275395|chr19:39928298-39928298|G/T|missense_variant;nc|ENSG00000275395|Q9Y6R7|FCGBP	91.26522074875469	0.06129826844580791	6				NaN	NaN	0	NaN	4056	2786	6838
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6845	21.164	NaN	4420.6	30	0	787.48	0.033			+	16595	HGGFAIRH	8	61	447.7375826773209	893.4606124214419	2	447.7374267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HGGFAIRH_	REV__SMC1A|p.R626H|1|0.58|ENSG00000072501|chrX:53405527-53405527|C/T|missense_variant	60.29395666154354	0.49887135096048313	6				NaN	NaN	0	NaN	4057	2786	6838
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6863	21.2	NaN	254110	30	0	45778	0.158	+			33940	RSAFTVIRK	9	118	359.8884432121691	1076.6435002367073	3	359.88897705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RSAFTVIRK_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	120.63048641472336	0.02081808097628796	6				NaN	NaN	0	NaN	4072	2789	6862
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6864	21.203	NaN	63025	30	0	12821	0.106				-1	SGVCIPSQYQC	11	129	414.51466676803636	1240.5221709043092	3	414.5155029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SGVC(Carbamidomethyl (C))IPSQYQC_	CFI|p.N549Kfs*19|1|0.2|ENSG00000205403|chr4:109740998-109740999|-/T|frameshift_variant;ENSG00000205403|ENST00000394634|CFI	48.601550744091256	0.44024757269956427	6				NaN	NaN	0	NaN	4073	2789	6862
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6865	21.205	NaN	32335	30	0	4782.3	0.106	+			33059	REKETKALSL	10	109	392.23087963285207	1173.6708094987562	3	392.23114013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_REKETKALSL_	ENSG00000100345|ENST00000216181|MYH9;ENSG00000133026|ENST00000360416|MYH10;ENSG00000133392|ENST00000300036|MYH11;nc|ENSG00000100345|P35579-2|MYH9;nc|ENSG00000133026|P35580-2|MYH10;nc|ENSG00000133026|P35580-3|MYH10;nc|ENSG00000133026|P35580-5|MYH10;nc|ENSG00000133026|P35580|MYH10;nc|ENSG00000133392|P35749-2|MYH11;nc|ENSG00000133392|P35749-3|MYH11;nc|ENSG00000133392|P35749-4|MYH11;SYNDIG1-MYH9|1|fusion	75.04331003522576	0.23611669241777622	6				NaN	NaN	0	NaN	4074	2789	6862
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6866	21.207	NaN	88914	30	0	53050	0.106			+	34069	RSPHRRLR	8	87	539.329124367736	1076.6436958022718	2	539.3302001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RSPHRRLR_	REV__ENSG00000048649|ENST00000308488|RSF1;REV__nc|ENSG00000048649|Q96T23-2|RSF1;REV__nc|ENSG00000048649|Q96T23-3|RSF1	60.11826168202944	0.5006107059937851	6				NaN	NaN	0	NaN	4075	2789	6862
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6867	21.208	NaN	67556	30	0	35586	0.106				-1	 	0	58	328.5132056977756	982.5177876935269	3	328.5137634277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4076	2789	6862
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6868	21.21	NaN	39052	30	0	5103.5	0.106				-1	 	0	92	322.5096786914263	964.507206674479	3	322.51019287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4077	2789	6862
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6869	21.212	NaN	27522	30	0	12755	0.037	+			25500	LPSHTKIKY	9	77	362.8812208644088	1085.6218331934265	3	362.881591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LPSHTKIKY_	CWC15|p.P93Afs*12|1|0.42|ENSG00000150316|chr11:94971034-94971035|-/T|frameshift_variant;ENSG00000150316|ENST00000279839|CWC15;ENST00000539856.5_1_11:94704113-94705349:-|nuORF	47.657333605630114	0.33044192980041115	6				NaN	NaN	0	NaN	4078	2789	6862
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6888	21.248	NaN	31535	30	0	12621	0.214			+	42616	TAVAEEVTSY	10	94	357.1731520548385	1068.4976267647155	3	357.17364501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAVAEEVTSY_	REV__ENSG00000100813|ENST00000605057|ACIN1;REV__nc|ENSG00000100813|Q9UKV3-2|ACIN1;REV__nc|ENSG00000100813|Q9UKV3-3|ACIN1;REV__nc|ENSG00000100813|Q9UKV3-5|ACIN1;REV__nc|ENSG00000100813|Q9UKV3|ACIN1	27.882242232435846	0.6521336255503853	6				NaN	NaN	0	NaN	4094	2792	6887
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6889	21.251	NaN	36543	30	0	16289	0.106				-1	 	0	85	384.771786926274	767.529020919348	2	384.77203369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4095	2792	6887
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6890	21.254	NaN	19270	30	0	2081	0.106	+			2751	ARFQPNKPF	9	84	368.86939129686334	1103.58634449079	3	368.8697509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ARFQPNKPF_	ENSG00000134744|ENST00000257177|TUT4;ENST00000466440.1_1_1:52890958-52897138:-|nuORF;nc|ENSG00000134744|Q5TAX3|TUT4	66.42927471994793	0.16001998865088202	6				NaN	NaN	0	NaN	4096	2792	6887
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6891	21.255	NaN	5179.6	30	0	2386.2	0.106			+	34396	RTSGLVFDDL	10	63	561.7923563361361	1121.570159739072	2	561.7932739257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RTSGLVFDDL_	REV__PRAF2|p.A20T|1|0.26|ENSG00000243279|chrX:49073930-49073930|C/T|missense_variant	45.97224482568171	0.49411383603842696	6				NaN	NaN	0	NaN	4097	2792	6887
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6892	21.257	NaN	7900.9	30	0	1852.3	0.106			+	21006	KKGTAYQVL	9	66	504.2976524652269	NaN	0	504.29766845703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KKGTAYQVL_	REV__ENSG00000198301|ENST00000356260|SDAD1;REV__ENST00000395710.5_1_4:76871905-76902632:-|nuORF;REV__ENST00000513089.5_1_4:76886972-76894529:-|nuORF;REV__nc|ENSG00000198301|Q9NVU7-2|SDAD1;REV__SDAD1|p.K275Rfs*15|1|0.22|ENSG00000198301|chr4:75970368-75970368|T/-|frameshift_variant	49.44154591367651	0.21054156626303966	6				NaN	NaN	0	NaN	4098	2792	6887
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6893	21.259	NaN	5284.3	30	0	367.69	0.033				-1	VAPGVAGAR	9	65	420.2399074980914	NaN	0	420.2402038574219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))VAPGVAGAR_	ENST00000370873.8_1_20:60718414-60718447:-|nuORF	40.5726180659479	0.27166212580479165	6				NaN	NaN	0	NaN	4099	2792	6887
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6894	21.26	NaN	27933	30	0	10218	0.141			+	2263	ALVQLDTST	9	70	316.50610223689864	946.4964773108959	3	316.5066223144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ALVQLDTST_	REV__ENSG00000166428|ENST00000392593|PLD4	34.172542307311794	0.4838870758800184	6				NaN	NaN	0	NaN	4100	2792	6887
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6912	21.298	NaN	71843	30	0	45672	0.214				-1	 	0	83	437.24244597064643	872.4703390080929	2	437.2428894042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4115	2795	6911
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6913	21.301	NaN	37462	30	0	14165	0.106				-1	 	0	73	517.2375107320008	1032.4604685308016	2	517.238525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4116	2795	6911
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6914	21.303	NaN	41642	30	0	7346.9	0.106				-1	 	0	85	464.74551168153397	927.476470429868	2	464.74578857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4117	2795	6911
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6915	21.305	NaN	105040	30	0	21279	0.106				-1	 	0	99	477.74753748371234	953.4805220342247	2	477.7479553222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4118	2795	6911
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6916	21.307	NaN	5394.4	30	0	845.37	0.106	+			6015	AVMDNKNPTIK	11	75	615.8285153008969	1229.6424776685938	2	615.8292846679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVMDNKNPTIK_	CKAP5|p.K1126Rfs*25|1|0.46|ENSG00000175216|chr11:46767609-46767609|T/-|frameshift_variant;CKAP5|p.V1971Lfs*42|1|0.03|ENSG00000175216|chr11:46744211-46744212|-/TTGAAAAAAAG|frameshift_variant;ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5	137.39636686458226	0.0007153481852768362	6				NaN	NaN	0	NaN	4119	2795	6911
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6917	21.309	NaN	15985	30	0	2056.7	0.035	+			44563	TTAQLQVQK	9	86	508.7896205781903	1015.5646882231806	2	508.7904357910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TTAQLQVQK_	ENSG00000127603|ENST00000564288|MACF1;nc|ENSG00000127603|O94854|MACF1;nc|ENSG00000127603|Q9UPN3-2|MACF1;nc|ENSG00000127603|Q9UPN3-3|MACF1;nc|ENSG00000127603|Q9UPN3-4|MACF1;nc|ENSG00000127603|Q9UPN3-5|MACF1;nc|ENSG00000127603|Q9UPN3|MACF1	157.3448221729694	0.005157168637584854	6				NaN	NaN	0	NaN	4120	2795	6911
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6918	21.309	NaN	29597	30	0	4314.8	0.139	+			3740	ATAAVTAAVK	10	103	451.76854290524005	901.5225328772801	2	451.7688903808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATAAVTAAVK_	ENSG00000165476|ENST00000373758|REEP3;nc|ENSG00000165476|Q6NUK4-2|REEP3	136.98908636845044	0.01155686115611441	6				NaN	NaN	0	NaN	4121	2795	6911
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6936	21.349	NaN	207740	30	0	59302	0.168	+			37108	SISSGPIQK	9	82	458.75783029210436	915.5011076510087	2	458.75836181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SISSGPIQK_	ENSG00000006611|ENST00000005226|USH1C;nc|ENSG00000006611|Q9Y6N9-2|USH1C;nc|ENSG00000006611|Q9Y6N9-3|USH1C;nc|ENSG00000006611|Q9Y6N9-4|USH1C;nc|ENSG00000006611|Q9Y6N9|USH1C	131.03138772384656	0.014687601201650916	6				NaN	NaN	0	NaN	4136	2798	6935
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6937	21.351	NaN	22223	30	0	5335.9	0.106	+			37822	SMNANTITK	9	78	490.2467546305599	978.4789563279198	2	490.2473449707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SMNANTITK_	ENSG00000175467|ENST00000312397|SART1	160.8219353732433	0.004346709298329381	6				NaN	NaN	0	NaN	4137	2798	6935
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6938	21.354	NaN	26464	30	0	9745.4	0.106			+	33987	RSGFRETAE	9	76	526.7598516757248	1051.5051504182495	2	526.7608032226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RSGFRETAE_	REV__ENST00000562009.1_1_15:74654250-74654382:+|nuORF	58.22992032128504	0.22837015374068087	6				NaN	NaN	0	NaN	4138	2798	6935
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6939	21.355	NaN	24253	30	0	13589	0.106	+			50649	YEDLTAKDIEE	11	74	663.3093528271887	1324.6041527211773	2	663.3077392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YEDLTAKDIEE_	ENSG00000178127|ENST00000318388|NDUFV2	49.536043120802724	0.4274608637932522	6				NaN	NaN	0	NaN	4139	2798	6935
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6940	21.357	NaN	9615.9	30	0	4800.4	0.106	+			30554	QALKNQLQ	8	63	471.77151743835185	941.5284819435037	2	471.7717590332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QALKNQLQ_	ENSG00000168172|ENST00000307602|HOOK3	82.30502934623384	0.30436709589983096	6				NaN	NaN	0	NaN	4140	2798	6935
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6941	21.359	NaN	12806	30	0	7234.6	0.106			+	-1	VVASLMVDNK	10	47	364.53119044697485	1090.5717419411246	3	364.5318603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_VVASLM(Oxidation (M))VDNK_	REV__ENSG00000146938|ENST00000381095|NLGN4X;REV__ENSG00000165246|ENST00000684976|NLGN4Y;REV__ENSG00000169760|ENST00000695368|NLGN1;REV__ENSG00000169992|ENST00000302926|NLGN2;REV__ENSG00000196338|ENST00000358741|NLGN3;REV__ENST00000477079.1_1_X:5762523-5821281:-|nuORF;REV__nc|ENSG00000146938|Q8N0W4-2|NLGN4X;REV__nc|ENSG00000165246|Q8NFZ3-2|NLGN4Y;REV__nc|ENSG00000165246|Q8NFZ3|NLGN4Y;REV__nc|ENSG00000169760|Q8N2Q7-2|NLGN1;REV__nc|ENSG00000169760|Q8N2Q7|NLGN1;REV__nc|ENSG00000196338|Q9NZ94-2|NLGN3;REV__nc|ENSG00000196338|Q9NZ94-3|NLGN3;REV__NLGN4X|p.K550Nfs*25|1|0.14|ENSG00000146938|chrX:5893618-5893618|T/-|frameshift_variant	24.519189625965996	0.6795976720565101	6				NaN	NaN	0	NaN	4141	2798	6935
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6942	21.361	NaN	18736	30	0	1614.3	0.04			+	-1	LKDMIENMKDG	11	81	442.54036053550413	1324.5992522067124	3	442.54071044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Oxidation (M)	_LKDM(Oxidation (M))IENM(Oxidation (M))KDG_	REV__ENSG00000107949|ENST00000278100|BCCIP	53.59686742100583	0.38061189074210516	6				NaN	NaN	0	NaN	4142	2798	6935
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6960	21.397	NaN	33457	30	0	6223.5	0.214			+	6968	CPRPASFLQS	10	109	369.1863775586101	1104.5373032760303	3	369.1867980957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CPRPASFLQS_	REV__SLC18A1|p.F54Lfs*39|1|0.1|ENSG00000036565|chr8:20179446-20179447|TG/-|frameshift_variant	36.446750945000026	0.5818864909973037	6				NaN	NaN	0	NaN	4157	2801	6959
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6961	21.401	NaN	13808	30	0	1991.2	0.106				-1	 	0	71	519.2208207300911	1036.427088526982	2	519.2216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4158	2801	6959
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6962	21.403	NaN	13946	30	0	1585.7	0.106	+			38543	SSEAPLVQK	9	85	479.76247315056474	957.5103933679295	2	479.7635803222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSEAPLVQK_	ENSG00000054654|ENST00000555002|SYNE2;ENST00000557005.1_1_14:64490935-64514966:+|nuORF;nc|ENSG00000054654|Q8WXH0|SYNE2;SYNE2|p.A5240Qfs*5|1|0.07|ENSG00000054654|chr14:64152639-64152639|G/-|frameshift_variant;SYNE2|p.D3074Ffs*8|1|0.07|ENSG00000054654|chr14:64053132-64053133|-/TTTCTTTTTCAAATACTTG|frameshift_variant;SYNE2|p.F2563Ifs*28|1|0.34|ENSG00000054654|chr14:64051593-64051594|-/A|frameshift_variant;SYNE2|p.F2840Lfs*3|1|0.38|ENSG00000054654|chr14:64052427-64052427|T/-|frameshift_variant;SYNE2|p.F4992Lfs*13|1|0.39|ENSG00000054654|chr14:64140067-64140067|T/-|frameshift_variant;SYNE2|p.L5308Ifs*18|1|0.12|ENSG00000054654|chr14:64158750-64158751|GG/-|frameshift_variant;SYNE2|p.S6651Rfs*83|1|0.29|ENSG00000054654|chr14:64220596-64220597|-/G|frameshift_variant	136.26810882979174	0.012230845423532208	6				NaN	NaN	0	NaN	4159	2801	6959
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6963	21.405	NaN	17616	30	0	4637.5	0.106	+			10479	EVQPLHPDK	9	69	531.7819427550346	1061.5493325768691	2	531.7827758789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EVQPLHPDK_	ENSG00000196517|ENST00000372310|SLC6A9;nc|ENSG00000196517|P48067-3|SLC6A9;nc|ENSG00000196517|P48067|SLC6A9	60.11826168202944	0.21262886028301267	6				NaN	NaN	0	NaN	4160	2801	6959
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6964	21.407	NaN	4855.4	30	0	326.94	0.106	+			6992	CRAQTPTAVT	10	73	524.2652216744101	1046.51589041562	2	524.2664794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_CRAQTPTAVT_	SNED1|p.R1289Gfs*59|1|0.09|ENSG00000162804|chr2:241073313-241073313|C/-|frameshift_variant	49.536043120802724	0.461275219792494	6				NaN	NaN	0	NaN	4161	2801	6959
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6965	21.408	NaN	19297	30	0	5962.7	0.036	+			37699	SLSLVEIYK	9	77	351.2058100669729	1050.5956008011187	3	351.2063903808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLSLVEIYK_	ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP	23.04248740728303	0.5879033540491928	6				NaN	NaN	0	NaN	4162	2801	6959
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6966	21.409	NaN	7641.3	30	0	1083.4	0.142	+			50737	YEKDDKLTP	9	69	554.7801890406096	NaN	0	554.780029296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YEKDDKLTP_	ENSG00000092820|ENST00000367075|EZR	82.7504851949679	0.061958946529908215	6				NaN	NaN	0	NaN	4163	2801	6959
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6984	21.447	NaN	82070	30	0	16712	0.214				-1	 	0	89	575.789714326656	1149.564875720112	2	575.790771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4178	2804	6983
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6985	21.451	NaN	27043	30	0	5525.7	0.106			+	3741	ATACCPGILI	10	75	481.2457364890715	960.476920044943	2	481.245849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATACCPGILI_	REV__ENSG00000132549|ENST00000357162|VPS13B;REV__nc|ENSG00000132549|Q7Z7G8-6|VPS13B;REV__nc|ENSG00000132549|Q7Z7G8|VPS13B;REV__VPS13B|p.M3156Ifs*2|1|0.07|ENSG00000132549|chr8:99832427-99832428|-/TA|frameshift_variant;REV__VPS13B|p.S3988Lfs*4|1|0.55|ENSG00000132549|chr8:99875552-99875553|-/C|frameshift_variant;REV__VPS13B|p.S3988Pfs*25|1|0.11|ENSG00000132549|chr8:99875553-99875553|C/-|frameshift_variant	55.50420428727701	0.4067289358710215	6				NaN	NaN	0	NaN	4179	2804	6983
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6986	21.453	NaN	15592	30	0	1599.1	0.106	+			16251	HEEKVFRAV	9	80	557.803430948806	1113.5923089644118	2	557.80419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HEEKVFRAV_	ENSG00000095139|ENST00000264028|ARCN1;nc|ENSG00000095139|P48444-2|ARCN1	126.24258497203832	0.01742065577488747	6				NaN	NaN	0	NaN	4180	2804	6983
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6987	21.455	NaN	16986	30	0	2344.2	0.106	+			23022	KVSQVIMEK	9	72	531.3039982669612	1060.5934436007224	2	531.30517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KVSQVIMEK_	ENSG00000164985|ENST00000380733|PSIP1	107.45493779368988	0.031594950556992824	6				NaN	NaN	0	NaN	4181	2804	6983
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6988	21.457	NaN	28544	30	0	4382.9	0.106	+			45924	VAQRDPIIAK	10	92	370.8919759367142	1109.6540984103426	3	370.89239501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VAQRDPIIAK_	ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC;PRKDC|p.K3681Nfs*6|1|0.32|ENSG00000253729|chr8:47785174-47785177|TTCT/-|frameshift_variant;PRKDC|p.M3670*|1|0.5|ENSG00000253729|chr8:47785212-47785212|T/-|frameshift_variant;PRKDC|p.M3846Cfs*12|1|0.13|ENSG00000253729|chr8:47779047-47779047|T/-|frameshift_variant;PRKDC|p.M4020Cfs*2|1|0.31|ENSG00000253729|chr8:47776968-47776968|T/-|frameshift_variant;PRKDC|p.N3605Kfs*3|1|0.22|ENSG00000253729|chr8:47788993-47788994|-/T|frameshift_variant;PRKDC|p.N4037Ifs*15|1|0.17|ENSG00000253729|chr8:47776916-47776916|T/-|frameshift_variant;PRKDC|p.S3402Ifs*16|1|0.04|ENSG00000253729|chr8:47799302-47799303|-/AAACCGTGAGTTAGAGGAGGTAA|frameshift_variant;PRKDC|p.S4099Qfs*6|1|0.25|ENSG00000253729|chr8:47774265-47774265|A/-|frameshift_variant;PRKDC|p.T3268Pfs*7|1|0.5|ENSG00000253729|chr8:47803426-47803426|T/-|frameshift_variant;PRKDC|p.W3401Cfs*4|1|0.01|ENSG00000253729|chr8:47799304-47799305|-/AATGAATA|frameshift_variant	80.45461616416974	0.1919067876629769	6				NaN	NaN	0	NaN	4182	2804	6983
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6989	21.458	NaN	8329.3	30	0	2093.9	0.036				-1	 	0	59	342.85691346280805	1025.5489109886241	3	342.85748291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4183	2804	6983
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6990	21.459	NaN	7559.1	30	0	1132.6	0.139			+	17115	HSLEDQSY	8	62	489.71129235282694	977.4080317724539	2	489.7114562988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HSLEDQSY_	REV__nc|ENSG858|P60608|ERVFC1-1	63.30626980617807	0.4690498839812213	6				NaN	NaN	0	NaN	4184	2804	6983
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7008	21.498	NaN	29082	30	0	8628.6	0.214				-1	 	0	82	437.75253914654536	873.4905253598907	2	437.7529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4199	2807	7007
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7009	21.502	NaN	13479	30	0	2589.9	0.106	+			38172	SQCDSPYVTK	10	84	592.765528079553	1183.5165032259058	2	592.7666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SQC(Carbamidomethyl (C))DSPYVTK_	ENSG00000102572|ENST00000539966|STK24;ENST00000481288.1_1_13:99161185-99171658:-|nuORF;nc|ENSG00000102572|Q9Y6E0|STK24	169.9932187642096	0.0036876354521960214	6				NaN	NaN	0	NaN	4200	2807	7007
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7010	21.504	NaN	50393	30	0	16733	0.106				-1	 	0	76	411.72096092688804	821.4273689205761	2	411.7213134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4201	2807	7007
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7011	21.506	NaN	8480.9	30	0	2146.8	0.106	+			45324	TVSESGTATLK	11	71	547.2898587706884	1092.5651646081767	2	547.2908325195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TVSESGTATLK_	ENSG00000188112|ENST00000341865|C6orf132;nc|nan|Q5T0Z8-2|C6orf132;nc|nan|Q5T0Z8-4|C6orf132	106.88024417677582	0.046463184254991054	6				NaN	NaN	0	NaN	4202	2807	7007
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7012	21.508	NaN	17893	30	0	3436.7	0.106	+			44343	TSGPTTPLK	9	85	451.2521983664717	900.4898437997434	2	451.2528991699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TSGPTTPLK_	ENSG00000188112|ENST00000341865|C6orf132	93.1432384553994	0.056003526918089595	6				NaN	NaN	0	NaN	4203	2807	7007
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7013	21.509	NaN	14536	30	0	5856.1	0.037	+			31284	QICDTYNQK	9	72	585.2656393109779	1168.5167256887557	2	585.2667236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_QIC(Carbamidomethyl (C))DTYNQK_	ENSG00000165175|ENST00000614558|MID1IP1	143.8867514904718	0.008656634767784652	6				NaN	NaN	0	NaN	4204	2807	7007
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7014	21.51	NaN	19204	30	0	4863.3	0.139				-1	 	0	54	379.72369841632013	757.4328438994403	2	379.7238464355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4205	2807	7007
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7032	21.55	NaN	421240	30	0	99964	0.143	+			48414	VTIKEGSQLK	10	101	368.21995406735743	1101.6380328022724	3	368.2203674316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTIKEGSQLK_	ENSG00000100138|ENST00000401959|SNU13	53.08895987439943	0.42869529153390606	6				NaN	NaN	0	NaN	4220	2810	7031
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7033	21.552	NaN	19531	30	0	3906.3	0.106			+	-1	KQSLWPLSPC	10	87	608.3135746746523	1214.6125964161045	2	608.314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_KQSLWPLSPC(Carbamidomethyl (C))_	REV__ENST00000442824.1_1_5:97549394-97549466:+|nuORF	134.81075121484326	0.012137651332351585	6				NaN	NaN	0	NaN	4221	2810	7031
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7034	21.554	NaN	13587	30	0	3344.4	0.106				-1	 	0	60	430.25278756154387	858.4910221898878	2	430.253173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4222	2810	7031
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7035	21.556	NaN	21804	30	0	3373.9	0.106	+			37685	SLSELTTQK	9	90	503.77542981472715	1005.5363066962543	2	503.783447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLSELTTQK_	ENSG00000109063|ENST00000583535|MYH3	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	4223	2810	7031
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7036	21.558	NaN	15217	30	0	10118	0.106				-1	 	0	61	422.72921516463686	843.4438773960737	2	422.7296447753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4224	2810	7031
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7037	21.559	NaN	29362	30	0	10137	0.106	+			30278	PTGGRHDRP	9	65	496.75517609445035	991.4957992557007	2	496.75567626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PTGGRHDRP_	ENST00000300954.9_1_19:1483001-1487678:-|nuORF;ENST00000441747.6_1_19:1482426-1490130:-|nuORF;ENST00000586616.5_1_19:1483766-1490130:-|nuORF;ENST00000588195.5_1_19:1483001-1490375:-|nuORF;ENST00000591201.5_1_19:1483001-1487304:-|nuORF	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	4225	2810	7031
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7038	21.561	NaN	6648.4	30	0	2669.7	0.036				-1	 	0	56	345.8896294846591	1034.6470590541774	3	345.89013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4226	2810	7031
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7056	21.597	NaN	53310	30	0	6958.4	0.214			+	7398	DEEVLADQY	9	76	541.2376620820108	1080.4607712308216	2	541.23876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DEEVLADQY_	REV__ENSG00000162105|ENST00000601538|SHANK2;REV__nc|ENSG00000162105|Q9UPX8-1|SHANK2;REV__nc|ENSG00000162105|Q9UPX8-4|SHANK2	63.30626980617807	0.18605348971131092	6				NaN	NaN	0	NaN	4241	2813	7055
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7057	21.6	NaN	106040	30	0	68872	0.106	+			1818	AIFQGKLEKK	10	97	387.9041268860231	1160.6905512582694	3	387.9045104980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AIFQGKLEKK_	ENSG00000118322|ENST00000327245|ATP10B	68.62578634547417	0.2885473079336931	6				NaN	NaN	0	NaN	4242	2813	7055
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7058	21.602	NaN	13840	30	0	1299.3	0.106				-1	 	0	76	416.2134307007727	830.4123084683454	2	416.2138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4243	2813	7055
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7059	21.604	NaN	6140.4	30	0	640.9	0.106				-1	 	0	67	481.7969449218517	961.5793369105035	2	481.79736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4244	2813	7055
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7060	21.606	NaN	4077.7	30	0	462.5	0.106			+	-1	RCLPLPLPC	9	73	534.7868849199965	1067.559216906793	2	534.7881469726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_RCLPLPLPC(Carbamidomethyl (C))_	REV__ENSG00000184923|ENST00000381707|NUTM2A;REV__ENSG00000188199|ENST00000429828|NUTM2B;REV__ENSG00000228570|ENST00000429984|NUTM2E;REV__nc|ENSG00000184923|Q8IVF1-2|NUTM2A;REV__nc|ENSG00000188199|A6NNL0-2|NUTM2B	60.29395666154354	0.21116425950210296	6				NaN	NaN	0	NaN	4245	2813	7055
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7061	21.608	NaN	4912.9	30	0	1145.5	0.036	+			46444	VESHIQHSL	9	66	525.2725226055999	1048.5304922779997	2	525.2726440429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VESHIQHSL_	ENSG00000168612|ENST00000372523|ZSWIM1;ZSWIM1|p.P379Lfs*20|1|0.42|ENSG00000168612|chr20:45883724-45883724|C/-|frameshift_variant	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	4246	2813	7055
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7062	21.608	NaN	16056	30	0	2991.1	0.142				-1	TVYVAMCHK	9	74	562.7631807247362	1123.5118085162724	2	562.7650756835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C),Oxidation (M)	_TVYVAM(Oxidation (M))C(Carbamidomethyl (C))HK_	ENSG00000188162|ENST00000399397|OTOG;nc|ENSG00000188162|Q6ZRI0-2|OTOG;nc|ENSG00000188162|Q6ZRI0|OTOG	76.84663266511073	0.11118375776443899	6				NaN	NaN	0	NaN	4247	2813	7055
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7080	21.647	NaN	50406	30	0	10789	0.212				-1	 	0	85	509.2816002638823	1016.5486475945646	2	509.2821350097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4262	2816	7079
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7081	21.65	NaN	23682	30	0	9980.1	0.106				-1	 	0	50	323.20093077778125	644.3873086223625	2	323.20135498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4263	2816	7079
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7082	21.652	NaN	24160	30	0	3194.6	0.106	+			33172	RETVIKQTM	9	89	553.3044379530294	1104.5943229728587	2	553.3055419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RETVIKQTM_	ENSG00000198498|ENST00000358572|TMA16;ENST00000508652.5_1_4:164415907-164436651:+|nuORF	106.88024417677582	0.032181361622142884	6				NaN	NaN	0	NaN	4264	2816	7079
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7083	21.654	NaN	27562	30	0	7267.9	0.106				-1	 	0	74	352.2249104830738	1053.6529020494215	3	352.2254333496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4265	2816	7079
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7084	21.656	NaN	16076	30	0	10643	0.106	+			35380	SAPTETHSL	9	66	471.72951391630346	941.4444748994069	2	471.7296142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SAPTETHSL_	ENSG00000184451|ENST00000332438|CCR10	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	4266	2816	7079
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7085	21.658	NaN	10926	30	0	881.58	0.034	+			26061	LSLQKEQL	8	80	479.7810777818107	957.5476026304215	2	479.7817077636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSLQKEQL_	ENSG00000137699|ENST00000341846|TRIM29;nc|ENSG00000137699|Q14134-2|TRIM29;TRIM29|p.E403Rfs*7|1|0.16|ENSG00000137699|chr11:120125817-120125817|C/-|frameshift_variant	108.08749611321984	0.24621691167378246	6				NaN	NaN	0	NaN	4267	2816	7079
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7086	21.658	NaN	6652	30	0	911.84	0.139	+			3527	ASSLTQVTK	9	64	467.7633604008254	933.5121678684508	2	467.7635498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASSLTQVTK_	ENSG00000157741|ENST00000473989|UBN2;nc|ENSG00000157741|Q6ZU65-2|UBN2;UBN2|p.G1191Efs*28|1|0.17|ENSG00000157741|chr7:139284473-139284473|G/-|frameshift_variant;UBN2|p.S988Hfs*27|1|0.18|ENSG00000157741|chr7:139283862-139283862|C/-|frameshift_variant	61.691277971877994	0.19951612995419254	6				NaN	NaN	0	NaN	4268	2816	7079
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7104	21.698	NaN	32427	30	0	5694.2	0.214	+			15295	GTVDCVQAR	9	98	474.7324635064946	947.4503740797892	2	474.73175048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTVDCVQAR_	ENSG00000150593|ENST00000280154|PDCD4;ENST00000489049.5_1_10:112647518-112650449:+|nuORF;nc|ENSG00000150593|Q53EL6-2|PDCD4	115.49404669440601	0.023927554121326553	6				NaN	NaN	0	NaN	4283	2819	7103
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7105	21.701	NaN	57931	30	0	25869	0.106				-1	 	0	81	373.23247144285057	1116.6755849287517	3	373.2328186035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4284	2819	7103
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7106	21.703	NaN	34622	30	0	4664.5	0.106			+	36875	SIGDLKDEKF	10	113	384.5360117665339	1150.5862058998016	3	384.5362243652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SIGDLKDEKF_	REV__tr|U7T2M2|U7T2M2_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00755PE=4SV=1	42.396135135203025	0.5270658956260207	6				NaN	NaN	0	NaN	4285	2819	7103
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7107	21.705	NaN	10788	30	0	906.24	0.106	+			9551	ELEMQQDEENL	11	75	689.2951320162564	1376.5757110993127	2	689.2927856445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ELEMQQDEENL_	ENSG00000145388|ENST00000388822|METTL14	49.536043120802724	0.4274608637932522	6				NaN	NaN	0	NaN	4286	2819	7103
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7108	21.707	NaN	10648	30	0	809.18	0.106	+			41447	SVNLKVSPK	9	75	486.2974474869539	970.5803420407078	2	486.2978210449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVNLKVSPK_	ENSG00000164985|ENST00000380733|PSIP1;nc|ENSG00000164985|O75475-2|PSIP1;nc|ENSG00000164985|O75475-3|PSIP1;PSIP1|p.K229Sfs*36|1|0.45|ENSG00000164985|chr9:15474181-15474181|T/-|frameshift_variant	92.23892857375223	0.05855307001735979	6				NaN	NaN	0	NaN	4287	2819	7103
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7109	21.709	NaN	3839.6	30	0	348.18	0.036	+			22474	KTMPTTFNR	9	74	548.2837643824683	1094.5529758317366	2	548.2848510742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KTMPTTFNR_	ENSG00000138381|ENST00000260952|ASNSD1	56.43379154798735	0.2433427591689151	6				NaN	NaN	0	NaN	4288	2819	7103
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7110	21.709	NaN	5955.5	30	0	497.07	0.14			+	32190	QSTIKLTVT	9	72	495.79491133257125	989.5752697319425	2	495.79498291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QSTIKLTVT_	REV__ARHGAP21|p.R55I|1|0.32|ENSG00000107863|chr10:24670297-24670297|C/A|missense_variant	32.81241826257853	0.4965981579233955	6				NaN	NaN	0	NaN	4289	2819	7103
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7128	21.749	NaN	58432	30	0	35262	0.214				-1	 	0	75	325.53737337624864	973.590290728946	3	325.5378723144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4304	2822	7127
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7129	21.752	NaN	18475	30	0	3585.7	0.106			+	28950	NSAMIRTAIVK	11	73	401.89953760491005	NaN	0	401.8994445800781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NSAMIRTAIVK_	REV__ABCC10|p.L662Cfs*38|1|0.25|ENSG00000124574|chr6:43438647-43438647|G/-|frameshift_variant;REV__ABCC10|p.Q583Rfs*41|1|0.34|ENSG00000124574|chr6:43435885-43435885|C/-|frameshift_variant;REV__ENSG00000124574|ENST00000372530|ABCC10;REV__ENST00000443426.2_1_6:43395621-43402667:+|nuORF;REV__nc|ENSG00000124574|Q5T3U5-2|ABCC10	34.08650109265054	0.41350691770670583	6				NaN	NaN	0	NaN	4305	2822	7127
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7130	21.754	NaN	19094	30	0	2296	0.106			+	-1	LLMLFMIVL	9	89	370.22059921785404	NaN	0	370.2206115722656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_LLMLFM(Oxidation (M))IVL_	REV__ENSG00000111319|ENST00000228916|SCNN1A;REV__nc|ENSG00000111319|P37088-2|SCNN1A;REV__nc|ENSG00000111319|P37088-4|SCNN1A;REV__nc|ENSG00000111319|P37088-5|SCNN1A;REV__nc|ENSG00000111319|P37088-6|SCNN1A	37.15910966729921	0.2899585034171616	6				NaN	NaN	0	NaN	4306	2822	7127
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7131	21.756	NaN	32551	30	0	9674.7	0.106	+			38201	SQFLAPKAMKK	11	105	416.90852526316723	1247.7037463897018	3	416.90911865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SQFLAPKAMKK_	ENSG00000214530|ENST00000334805|STARD10;ENST00000535075.1_1_11:72465944-72466832:-|nuORF;ENST00000543089.1_1_11:72465944-72468974:-|nuORF	57.148748479083515	0.34890646465650643	6				NaN	NaN	0	NaN	4307	2822	7127
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7132	21.758	NaN	8500.5	30	0	634.14	0.106	+			33016	REHIKVQQL	9	83	575.8373584633572	1149.6601639935143	2	575.8385009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_REHIKVQQL_	EIF4G1|p.P1229Qfs*2|1|0.18|ENSG00000114867|chr3:184327606-184327606|C/-|frameshift_variant;ENSG00000114867|ENST00000346169|EIF4G1;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1	145.46060221211434	0.007927189773590037	6				NaN	NaN	0	NaN	4308	2822	7127
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7133	21.76	NaN	2457	30	0	778.19	0.035			+	-1	VAMLLGVLVG	10	42	329.8693620625903	986.586256787971	3	329.86962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_VAM(Oxidation (M))LLGVLVG_	REV__ENSG00000132874|ENST00000255226|SLC14A2;REV__nc|ENSG00000132874|Q15849-2|SLC14A2	18.262085536374414	0.7236521404371882	6				NaN	NaN	0	NaN	4309	2822	7127
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7134	21.76	NaN	4871.9	30	0	469.38	0.137				-1	 	0	62	420.7046507467327	839.3947485602654	2	420.7051086425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4310	2822	7127
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7152	21.8	NaN	30471	30	0	3948.9	0.214	+			44848	TTTGHLIYK	9	80	517.2870920047511	1032.5596310763021	2	517.28759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTTGHLIYK_	EEF1A1|p.P263Lfs*27|1|0.36|ENSG00000156508|chr6:73518595-73518595|G/-|frameshift_variant;EEF1A2|p.T239Hfs*50|1|0.26|ENSG00000101210|chr20:63493194-63493195|-/G|frameshift_variant;EEF1A2|p.T239Rfs*40|1|0.31|ENSG00000101210|chr20:63493195-63493195|G/-|frameshift_variant;ENSG00000101210|ENST00000217182|EEF1A2;ENSG00000156508|ENST00000309268|EEF1A1;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	110.11987700582712	0.028875675806141952	6				NaN	NaN	0	NaN	4325	2825	7151
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7153	21.803	NaN	9539.4	30	0	1360.6	0.106	+			758	AEEKHLHVL	9	68	359.20070925690385	1074.5802983709116	3	359.2012634277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEEKHLHVL_	ENSG00000072042|ENST00000381346|RDH11;ENST00000553816.5_1_14:68151682-68162420:-|nuORF;nc|ENSG00000072042|Q8TC12-2|RDH11;nc|ENSG00000072042|Q8TC12-3|RDH11	68.78682469695295	0.14603441672067394	6				NaN	NaN	0	NaN	4326	2825	7151
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7154	21.806	NaN	8130.1	30	0	773.94	0.106	+			41938	SVVQSGQLK	9	65	473.2717280554535	NaN	0	473.2716064453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVVQSGQLK_	ENGASE|p.S611Gfs*22|1|0.26|ENSG00000167280|chr17:79085943-79085950|CTGCCAGC/-|frameshift_variant;ENGASE|p.T547Hfs*45|1|0.16|ENSG00000167280|chr17:79085274-79085275|-/C|frameshift_variant;ENGASE|p.T547Pfs*14|2|0.35|ENSG00000167280|chr17:79085275-79085275|C/-|frameshift_variant;ENSG00000167280|ENST00000579016|ENGASE;nc|ENSG00000167280|Q8NFI3-2|ENGASE;nc|ENSG00000167280|Q8NFI3-3|ENGASE	81.52500206392136	0.06615817976141032	6				NaN	NaN	0	NaN	4327	2825	7151
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7155	21.807	NaN	11305	30	0	2782	0.106	+			39023	SSSGTVLSK	9	66	433.234386293779	864.454219654358	2	433.234619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSSGTVLSK_	ENSG00000145362|ENST00000357077|ANK2	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	4328	2825	7151
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7156	21.809	NaN	10606	30	0	826.07	0.106	+			34538	RVITEEEKNFK	11	91	464.9203774930152	1391.7393030792457	3	464.920654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RVITEEEKNFK_	ENSG00000167526|ENST00000311528|RPL13;ENST00000399461.8_1_16:89627605-89629447:+|nuORF;ENST00000484610.5_1_16:89627907-89629447:+|nuORF;ENST00000570149.1_1_16:89628679-89629447:+|nuORF;nc|ENSG00000167526|P26373-2|RPL13	45.8905560444647	0.4773422574017196	6				NaN	NaN	0	NaN	4329	2825	7151
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7157	21.811	NaN	190770	30	0	35716	0.034	+			15230	GTSSVIVSR	9	95	453.2555221152319	904.4964912972638	2	453.255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTSSVIVSR_	ENSG00000072803|ENST00000517395|FBXW11;nc|ENSG00000072803|Q9UKB1-2|FBXW11;nc|ENSG00000072803|Q9UKB1-3|FBXW11;nc|ENSG00000072803|Q9UKB1|FBXW11	163.1509380574825	0.003936019289634439	6				NaN	NaN	0	NaN	4330	2825	7151
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7158	21.812	NaN	316440	30	0	36629	0.14	+			6210	AVQRTLLEK	9	131	529.3208673546953	1056.6271817761906	2	529.3220825195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AVQRTLLEK_	ENSG00000002586|ENST00000381192|CD99;ENST00000381177.6_1_X:2656215-2658842:+|nuORF;nc|ENSG00000292348|P14209-3|CD99	125.71293069911285	0.017741295328254008	6				NaN	NaN	0	NaN	4331	2825	7151
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7177	21.85	NaN	1342100	30	0	531700	0.089	+			6212	AVQRTLLEK	9	80	353.21628072777753	1056.6270127835326	3	353.2178039550781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVQRTLLEK_	ENSG00000002586|ENST00000381192|CD99;ENST00000381177.6_1_X:2656215-2658842:+|nuORF;nc|ENSG00000292348|P14209-3|CD99	78.26377905018397	0.10505600812668463	6				NaN	NaN	0	NaN	4347	2828	7176
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7178	21.851	NaN	105700	30	0	37535	0.081			+	1635	AGNKKIEK	8	117	444.26857733355763	886.5226017339153	2	444.2693786621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AGNKKIEK_	REV__ENSG00000197386|ENST00000355072|HTT;REV__HTT|p.H2238Ffs*6|1|0.28|ENSG00000197386|chr4:3212643-3212644|CA/-|frameshift_variant;REV__HTT|p.N699Mfs*9|2|0.17|ENSG00000197386|chr4:3131390-3131390|A/-|frameshift_variant;REV__HTT|p.P1176Lfs*3|1|0.18|ENSG00000197386|chr4:3154316-3154316|C/-|frameshift_variant;REV__HTT|p.P2413Hfs*44|1|0.6|ENSG00000197386|chr4:3217944-3217944|C/-|frameshift_variant	102.7733458925114	0.2491487235419157	6				NaN	NaN	0	NaN	4348	2828	7176
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7179	21.853	NaN	97946	30	0	63950	0.106	+			18346	IQGHPFFRNV	10	93	405.5521543104078	1213.6346335314233	3	405.55267333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IQGHPFFRNV_	ENSG00000163558|ENST00000295797|PRKCI	35.61828744233558	0.588957954432594	6				NaN	NaN	0	NaN	4349	2828	7176
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7180	21.855	NaN	13172	30	0	2947	0.106	+			31691	QNLFKFCL	8	77	357.1883597502249	1068.5432498508746	3	357.18878173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_QNLFKFC(Carbamidomethyl (C))L_	ENSG00000136731|ENST00000259253|UGGT1;nc|ENSG00000136731|Q9NYU2-2|UGGT1;UGGT1|p.D546Mfs*27|1|0.03|ENSG00000136731|chr2:128138768-128138769|-/AT|frameshift_variant	40.5726180659479	0.6527593143185008	6				NaN	NaN	0	NaN	4350	2828	7176
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7181	21.856	NaN	8167	30	0	1430.2	0.106			+	37642	SLQLSGGAV	9	65	416.23216330901005	NaN	0	416.2322692871094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SLQLSGGAV_	REV__ENST00000512660.1_1_5:176936187-176936779:-|nuORF	45.97224482568171	0.23445038899310136	6				NaN	NaN	0	NaN	4351	2828	7176
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7182	21.858	NaN	25730	30	0	2435.4	0.106	+			22982	KVRTLIEQ	8	91	493.80264420030255	985.5907354674051	2	493.80364990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KVRTLIEQ_	ENSG00000136152|ENST00000349995|COG3;nc|ENSG00000136152|Q96JB2-2|COG3	123.20810148215591	0.22996878170173388	6				NaN	NaN	0	NaN	4352	2828	7176
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7183	21.86	NaN	7006.3	30	0	1435.7	0.106	+			25927	LSGVGGEAVK	10	70	458.75783029210436	915.5011076510087	2	458.7586364746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSGVGGEAVK_	ENST00000493434.1_1_17:16338039-16340200:+|nuORF	65.46538089061403	0.31613324008013116	6				NaN	NaN	0	NaN	4353	2828	7176
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7184	21.862	NaN	4788.3	30	0	1143.6	0.03				-1	 	0	50	335.2052696757901	668.3959864183802	2	335.2058410644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4354	2828	7176
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7202	21.897	NaN	53677	30	0	6780	0.19	+			7124	DAAKNQVAM	9	105	474.2343210147745	NaN	0	474.23394775390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DAAKNQVAM_	ENSG00000109971|ENST00000534624|HSPA8;ENSG00000126803|ENST00000247207|HSPA2;ENSG00000204390|ENST00000375654|HSPA1L;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000531063.1_1_11:122931759-122932032:-|nuORF;ENST00000532167.5_1_11:122930938-122932032:-|nuORF;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;ENST00000533238.5_1_11:122929516-122932032:-|nuORF;HSPA2|p.G138Afs*8|3|0.33|ENSG00000126803|chr14:64541257-64541257|G/-|frameshift_variant;HSPA8|p.K569Dfs*6|1|0.3|ENSG00000109971|chr11:123058302-123058303|TC/-|frameshift_variant;nc|ENSG00000109971|P11142-2|HSPA8	85.16082228582465	0.053699699744190164	6				NaN	NaN	0	NaN	4369	2831	7201
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7203	21.9	NaN	36820	30	0	3937.4	0.106			+	36914	SIIMLTLAGI	10	95	516.3131007388736	1030.611648544547	2	516.3137817382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SIIMLTLAGI_	REV__ENSG00000198743|ENST00000381151|SLC5A3	84.9155231211612	0.16018353804806162	6				NaN	NaN	0	NaN	4370	2831	7201
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7204	21.902	NaN	17400	30	0	6890.7	0.106	+			35335	SAPAGASEPPP	11	80	490.73710591822004	979.4596589032401	2	490.7375793457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAPAGASEPPP_	ENSG00000131503|ENST00000360839|ANKHD1;nc|ENSG00000131503|Q8IWZ3-2|ANKHD1;nc|ENSG00000131503|Q8IWZ3-3|ANKHD1;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;nc|ENSG00000131503|Q8IWZ3-5|ANKHD1;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	23.52269567125451	0.7430573033454468	6				NaN	NaN	0	NaN	4371	2831	7201
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7205	21.904	NaN	6908.1	30	0	1337.4	0.106				-1	TIKLKCGH	8	73	478.77109361293753	955.5276342926751	2	478.7730712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_TIKLKC(Carbamidomethyl (C))GH_	ENSG00000124201|ENST00000396105|ZNFX1	57.81127852772723	0.5234495074909924	6				NaN	NaN	0	NaN	4372	2831	7201
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7206	21.906	NaN	14626	30	0	2717.4	0.106	+			18724	ITGPNMGGK	9	75	437.7256279884185	873.4367030436371	2	437.72601318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ITGPNMGGK_	ENSG00000095002|ENST00000233146|MSH2;ENSG00000113318|ENST00000265081|MSH3;MSH2|p.M813Nfs*11|1|0.17|ENSG00000095002|chr2:47478497-47478498|-/A|frameshift_variant;MSH2|p.T806Kfs*4|1|0.2|ENSG00000095002|chr2:47478472-47478478|CACTCAC/-|frameshift_variant;MSH3|p.N1020Ifs*40|1|0.46|ENSG00000113318|chr5:80864865-80864865|A/-|frameshift_variant;MSH3|p.N1020Kfs*17|1|0.43|ENSG00000113318|chr5:80864864-80864865|-/A|frameshift_variant;nc|ENSG00000095002|P43246-2|MSH2	49.44154591367651	0.3095138337212152	6				NaN	NaN	0	NaN	4373	2831	7201
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7207	21.907	NaN	12900	30	0	1592.6	0.106				-1	QLMHIYSQ	8	85	518.2510046015663	1034.4874562699324	2	518.2521362304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_QLM(Oxidation (M))HIYSQ_	ENSG00000144369|ENST00000304698|FAM171B	51.33545320467046	0.5859736979383976	6				NaN	NaN	0	NaN	4374	2831	7201
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7208	21.909	NaN	12746	30	0	4445.2	0.032				-1	 	0	66	384.771786926274	767.529020919348	2	384.77203369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4375	2831	7201
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7226	21.947	NaN	19622	30	0	2719.6	0.214	+			41831	SVSTHLITK	9	89	493.2868652056399	984.5591774780798	2	493.28717041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSTHLITK_	ENSG00000177873|ENST00000432264|ZNF619;ENST00000494154.6_1_3:40523704-40529729:+|nuORF;nc|ENSG00000177873|Q8N2I2-2|ZNF619;nc|ENSG00000177873|Q8N2I2-4|ZNF619;nc|ENSG00000177873|Q8N2I2|ZNF619	106.68306549817024	0.032382560583716295	6				NaN	NaN	0	NaN	4390	2834	7225
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7227	21.95	NaN	41724	30	0	3399.6	0.106	+			16179	HEALKENGVT	10	110	549.2833610536426	NaN	0	549.283447265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HEALKENGVT_	ENSG00000108828|ENST00000355653|VAT1;nc|ENSG00000108828|Q99536-2|VAT1;nc|ENSG00000108828|Q99536-3|VAT1	123.20810148215591	0.017570947977374466	6				NaN	NaN	0	NaN	4391	2834	7225
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7228	21.952	NaN	65088	30	0	6417.7	0.106	+			4409	ATIDGSVNPK	10	105	501.2659169302136	1000.5172809272273	2	501.2665100097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATIDGSVNPK_	ENSG00000116830|ENST00000369466|TTF2;ENST00000463696.1_1_1:117637951-117640053:+|nuORF;ENST00000492682.5_1_1:117635418-117640830:+|nuORF;TTF2|p.K1134Efs*22|1|0.25|ENSG00000116830|chr1:117101426-117101427|-/A|frameshift_variant	178.54760496737404	0.0013825827145267076	6				NaN	NaN	0	NaN	4392	2834	7225
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7229	21.954	NaN	15784	30	0	1277.3	0.106	+			31718	QNVHVFGVEG	10	75	543.2714833911723	1084.5284138491445	2	543.2725219726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QNVHVFGVEG_	ENSG00000144115|ENST00000674334|THNSL2;nc|ENSG00000144115|Q86YJ6-2|THNSL2;nc|ENSG00000144115|Q86YJ6-3|THNSL2;nc|ENSG00000144115|Q86YJ6-4|THNSL2;nc|ENSG00000144115|Q86YJ6-5|THNSL2	58.78195531508484	0.37691818691852547	6				NaN	NaN	0	NaN	4393	2834	7225
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7230	21.956	NaN	6954.5	30	0	536.17	0.106	+			24133	LEKTVKNCL	9	77	552.8079971905257	NaN	0	552.80810546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_LEKTVKNC(Carbamidomethyl (C))L_	ENSG00000113648|ENST00000511689|MACROH2A1;ENST00000511494.5_1_5:134670668-134681802:-|nuORF;ENST00000512507.5_1_5:134670668-134688768:-|nuORF;nc|ENSG00000113648|O75367-3|MACROH2A1;nc|ENSG00000113648|O75367|MACROH2A1	101.25262130126117	0.018912469721856617	6				NaN	NaN	0	NaN	4394	2834	7225
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7231	21.958	NaN	9895.9	30	0	1031.7	0.036			+	25896	LSGESDVNKL	10	73	531.2766438113339	1060.5387346894677	2	531.2776489257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSGESDVNKL_	REV__ENSG00000054690|ENST00000329153|PLEKHH1;REV__PLEKHH1|p.P545Rfs*42|1|0.62|ENSG00000054690|chr14:67572178-67572178|C/-|frameshift_variant	70.8162118820467	0.27065172005956	6				NaN	NaN	0	NaN	4395	2834	7225
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7232	21.959	NaN	10514	30	0	1553.6	0.14	+			28457	NFLIHHLT	8	83	497.77552694614064	993.5365009590813	2	497.78167724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NFLIHHLT_	ENSG00000066933|ENST00000356056|MYO9A;ENST00000563542.5_1_15:72185266-72338904:-|nuORF;MYO9A|p.L1961*|2|0.14|ENSG00000066933|chr15:71878089-71878089|A/-|frameshift_variant;MYO9A|p.Y1422Ifs*8|1|0.18|ENSG00000066933|chr15:71898239-71898239|A/-|frameshift_variant;nc|ENSG00000066933|B2RTY4-2|MYO9A;nc|ENSG00000066933|B2RTY4-3|MYO9A;nc|ENSG00000066933|B2RTY4-4|MYO9A	33.51558372728122	0.7005509609380386	6				NaN	NaN	0	NaN	4396	2834	7225
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7250	21.998	NaN	57639	30	0	13767	0.177				-1	 	0	83	569.8080217654407	1137.6014905976813	2	569.8088989257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4411	2837	7249
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7251	22.001	NaN	35130	30	0	3690.5	0.106	+			47768	VSGSLQGGLL	10	102	465.76573626737036	929.5169196015407	2	465.7660827636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSGSLQGGLL_	ENST00000473501.1_1_3:196755203-196755518:-|nuORF	85.16082228582465	0.15877915086237185	6				NaN	NaN	0	NaN	4412	2837	7249
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7252	22.003	NaN	26853	30	0	3640.8	0.106	+			16211	HECASINRI	9	84	550.2683987303889	1098.5222445275776	2	550.2694702148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_HEC(Carbamidomethyl (C))ASINRI_	ENSG00000172531|ENST00000376745|PPP1CA;ENSG00000186298|ENST00000335007|PPP1CC;ENSG00000213639|ENST00000395366|PPP1CB;ENST00000526510.5_1_11:67166008-67168740:-|nuORF;ENST00000532446.5_1_11:67166008-67168991:-|nuORF;nc|ENSG00000172531|P62136-2|PPP1CA;nc|ENSG00000172531|P62136-3|PPP1CA;nc|ENSG00000186298|P36873-2|PPP1CC;PPP1CB|p.E217Rfs*3|1|0.29|ENSG00000213639|chr2:28788708-28788709|-/G|frameshift_variant	124.08010499294276	0.018729767491916592	6				NaN	NaN	0	NaN	4413	2837	7249
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7253	22.005	NaN	19524	30	0	4264.6	0.106	+			19927	KEFEGKTL	8	83	476.2602194876584	950.5058860421168	2	476.2606506347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEFEGKTL_	ENSG00000080824|ENST00000216281|HSP90AA1;ENST00000378770.1_1_4:190394307-190396341:+|nuORF;ENST00000530115.1_1_11:27910903-27911533:-|nuORF;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000205100|Q58FG1|HSP90AA4P	136.26810882979174	0.24432575764330772	6				NaN	NaN	0	NaN	4414	2837	7249
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7254	22.007	NaN	26933	30	0	3243.2	0.106	+			22318	KTFEGNLTTK	10	99	380.20803178068473	1137.6022659422542	3	380.2082214355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KTFEGNLTTK_	ENSG00000174231|ENST00000304992|PRPF8	68.62578634547417	0.2885473079336931	6				NaN	NaN	0	NaN	4415	2837	7249
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7255	22.008	NaN	12104	30	0	1259.9	0.106				-1	 	0	65	388.7548748737346	775.4951968142692	2	388.7549133300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4416	2837	7249
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7256	22.01	NaN	17027	30	0	2959.9	0.035	+			43880	TMMGQQVAK	9	77	497.2460297741344	992.4775066150688	2	497.2464904785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TMMGQQVAK_	ENSG00000106853|ENST00000407693|PTGR1;ENST00000374308.1_1_9:114355204-114361641:-|nuORF;ENST00000374313.5_1_9:114355204-114361983:-|nuORF;nc|ENSG00000106853|Q14914-2|PTGR1	65.46538089061403	0.16805504838372562	6				NaN	NaN	0	NaN	4417	2837	7249
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7274	22.048	NaN	46807	30	0	20031	0.214				-1	 	0	78	408.22535909992894	814.4361652666579	2	408.2257385253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4432	2840	7273
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7275	22.051	NaN	33278	30	0	6469.5	0.106				-1	 	0	86	527.3112028562105	1052.6078527792208	2	527.3121337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4433	2840	7273
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7276	22.053	NaN	26811	30	0	4180.3	0.106				-1	 	0	83	546.8417436916362	1091.6689344500724	2	546.8426513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4434	2840	7273
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7277	22.055	NaN	44796	30	0	8496.2	0.106				-1	 	0	85	418.5901086223805	1252.7484964673415	3	418.59063720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4435	2840	7273
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7278	22.057	NaN	19743	30	0	9500.9	0.106	+			47559	VRCVFKRP	8	42	335.53244127933533	1003.5754944382061	3	335.5329895019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VRCVFKRP_	HERVH-int_dup3524|chrX:4541521-4542183:-|2.9075701410676067|0.0031813577269869|9.84|447.0|19|1|anti-sense	13.775330524044264	0.789990904165365	6				NaN	NaN	0	NaN	4436	2840	7273
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7279	22.059	NaN	23044	30	0	1869.7	0.034	+			20975	KKERVLVT	8	83	486.8130633052373	971.6115736772746	2	486.8134460449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KKERVLVT_	tr|U7T2P5|U7T2P5_FUSNUUvrABCsystemproteinBOS=FusobacteriumnucleatumCTI-5OX=1316586GN=uvrBPE=3SV=1	50.0245360154114	0.5941082100236891	6				NaN	NaN	0	NaN	4437	2840	7273
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7280	22.059	NaN	7302.5	30	0	2642.6	0.143			+	36553	SFNLSLVKH	9	70	348.86542129379086	1043.5744344815726	3	348.8659973144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SFNLSLVKH_	REV__ENSG00000138757|ENST00000359707|G3BP2;REV__nc|ENSG00000138757|Q9UN86-2|G3BP2	56.72105179125745	0.24094814563026265	6				NaN	NaN	0	NaN	4438	2840	7273
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7298	22.099	NaN	135000	30	0	14914	0.172	+			24211	LERKVESL	8	105	487.2868367734534	972.5591206137068	2	487.2872314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LERKVESL_	ENSG00000026025|ENST00000544301|VIM;ENST00000421459.2_2_10:17272631-17276850:+|nuORF	104.0567914643314	0.248440647781298	6				NaN	NaN	0	NaN	4453	2843	7297
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7299	22.102	NaN	58122	30	0	6418.9	0.106	+			37926	SPEDIKKAY	9	103	525.7763738711	1049.5381948089998	2	525.7772827148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SPEDIKKAY_	DNAJB6|p.R24W|1|0.27|ENSG00000105993|chr7:157363165-157363165|C/T|missense_variant;DNAJB7|p.A14V|1|0.08|ENSG00000172404|chr22:40861954-40861954|G/A|missense_variant;DNAJB8|p.R24H|1|0.38|ENSG00000179407|chr3:128463175-128463175|C/T|missense_variant;ENSG00000105993|ENST00000262177|DNAJB6;ENSG00000172404|ENST00000307221|DNAJB7;ENSG00000179407|ENST00000319153|DNAJB8;ENST00000488001.5_1_7:157151266-157161444:+|nuORF;ENST00000526843.2_1_11:127810983-127811547:-|nuORF;nc|ENSG00000105993|O75190-2|DNAJB6;nc|ENSG00000105993|O75190-3|DNAJB6	182.3913890336628	0.0010559746847940753	6				NaN	NaN	0	NaN	4454	2843	7297
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7300	22.104	NaN	40897	30	0	8592.5	0.106				-1	 	0	90	467.7450066904918	933.4754604477836	2	467.74530029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4455	2843	7297
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7301	22.106	NaN	18120	30	0	1670.9	0.106				-1	 	0	85	597.2924283254553	1192.5703037177104	2	597.2938842773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4456	2843	7297
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7302	22.108	NaN	53808	30	0	20546	0.106	+			1856	AILDKNFRK	9	88	368.8886070037534	1103.6439916114603	3	368.88897705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AILDKNFRK_	ENSG00000119041|ENST00000263956|GTF3C3	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	4457	2843	7297
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7303	22.109	NaN	16982	30	0	2885.5	0.106				-1	 	0	76	364.7378408694118	727.4611288056236	2	364.73822021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4458	2843	7297
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7304	22.111	NaN	13763	30	0	3349.6	0.039			+	112	AAELEELQVER	11	66	429.55753945832737	1285.6507889751822	3	429.5580139160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AAELEELQVER_	REV__ENSG00000108479|ENST00000588479|GALK1	17.833141474888023	0.7869876583333034	6				NaN	NaN	0	NaN	4459	2843	7297
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7322	22.149	NaN	18093	30	0	2116.2	0.214	+			11222	FIDGVVARN	9	72	495.7726722410013	989.5307915488027	2	495.7733459472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FIDGVVARN_	DIS3L2|p.I516Ffs*15|1|0.43|ENSG00000144535|chr2:232263321-232263321|C/-|frameshift_variant;DIS3L2|p.K227Ifs*29|1|0.06|ENSG00000144535|chr2:232130692-232130693|GG/-|frameshift_variant;DIS3L2|p.L768Pfs*56|1|0.27|ENSG00000144535|chr2:232334638-232334639|-/C|frameshift_variant;DIS3L2|p.P612Rfs*33|1|0.4|ENSG00000144535|chr2:232329903-232329903|C/-|frameshift_variant;DIS3L2|p.S225Rfs*113|1|0.06|ENSG00000144535|chr2:232130690-232130690|T/-|frameshift_variant;ENSG00000144535|ENST00000325385|DIS3L2;ENST00000464554.5_1_2:232880330-232952439:+|nuORF;nc|ENSG00000144535|Q8IYB7-2|DIS3L2;nc|ENSG00000144535|Q8IYB7-3|DIS3L2;nc|ENSG00000144535|Q8IYB7-4|DIS3L2;nc|ENSG00000144535|Q8IYB7-5|DIS3L2	60.97194046774394	0.20551255781574032	6				NaN	NaN	0	NaN	4474	2846	7321
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7323	22.152	NaN	11925	30	0	1827	0.106	+			7209	DAIRNLHHY	9	86	380.1967656568148	1137.5684675706445	3	380.1964416503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DAIRNLHHY_	ENSG00000173914|ENST00000310046|RBM4B;ENSG00000173933|ENST00000310092|RBM4;nc|ENSG00000173933|Q9BWF3-2|RBM4;nc|ENSG00000173933|Q9BWF3-3|RBM4;nc|ENSG00000173933|Q9BWF3-4|RBM4	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	4475	2846	7321
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7324	22.155	NaN	10323	30	0	763.82	0.106	+			34773	RYIAQVKHL	9	79	376.56066236928206	1126.6601577080462	3	376.5608825683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RYIAQVKHL_	ENST00000267068.5_2_13:33110791-33110824:-|nuORF	58.22992032128504	0.22837015374068087	6				NaN	NaN	0	NaN	4476	2846	7321
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7325	22.156	NaN	12324	30	0	4653	0.106				-1	 	0	51	339.21281521972077	1014.6166162593623	3	339.21337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4477	2846	7321
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7326	22.158	NaN	26182	30	0	5351.5	0.106	+			2462	APLKSKMIY	9	83	533.8011504181177	1065.5877479030353	2	533.8021850585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_APLKSKM(Oxidation (M))IY_	ENSG00000125868|ENST00000246069|DSTN;ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65623104-65623215:-|nuORF;ENST00000602547.1_1_12:6994092-6994545:+|nuORF;nc|ENSG00000125868|P60981-2|DSTN;nc|ENSG00000165410|Q9Y281-3|CFL2	104.0567914643314	0.03506238181059741	6				NaN	NaN	0	NaN	4478	2846	7321
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7327	22.16	NaN	20795	30	0	1444.1	0.036	+			32822	RAYPHVFTK	9	88	559.8085801938458	1117.6026074544916	2	559.8092041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RAYPHVFTK_	ENSG00000164405|ENST00000378670|UQCRQ;ENST00000498309.1_1_5:132202377-132202798:+|nuORF;UQCRQ|p.G34A|1|0.04|ENSG00000164405|chr5:132866982-132866982|G/C|missense_variant	126.24258497203832	0.01742065577488747	6				NaN	NaN	0	NaN	4479	2846	7321
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7328	22.161	NaN	8460.1	30	0	1164	0.144	+			33892	RRRDAGWGP	9	69	357.5252756729872	1069.5539976191617	3	357.52569580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RRRDAGWGP_	ENST00000393841.5_1_6:44191398-44193833:+|nuORF	24.20275056022122	0.577060078256802	6				NaN	NaN	0	NaN	4480	2846	7321
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7346	22.2	NaN	103150	30	0	45538	0.214	+			19279	KAFNQGKIFK	10	108	394.2324611470791	1179.6755540414374	3	394.2326354980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAFNQGKIFK_	ENSG00000254772|ENST00000329251|EEF1G;ENST00000526409.5_1_11:62327153-62342310:-|nuORF;nc|ENSG00000254772|P26641-2|EEF1G;NCEH1-EEF1G|1|fusion	82.24051045832904	0.17731618517892733	6				NaN	NaN	0	NaN	4495	2849	7345
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7347	22.204	NaN	20898	30	0	6789.7	0.106			+	21293	KLRRGEAHK	9	88	365.55660714962676	1093.6479920490804	3	365.55694580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KLRRGEAHK_	REV__ENST00000416295.1_1_3:50312110-50312520:+|nuORF	49.44154591367651	0.3095138337212152	6				NaN	NaN	0	NaN	4496	2849	7345
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7348	22.206	NaN	7005.5	30	0	784.27	0.106			+	21294	KLRRGEAHK	9	72	547.8310581519277	1093.6475633706552	2	547.83203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KLRRGEAHK_	REV__ENST00000416295.1_1_3:50312110-50312520:+|nuORF	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	4497	2849	7345
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7349	22.208	NaN	10499	30	0	2399.9	0.106				-1	APLKSKMIY	9	66	356.20357514682706	NaN	0	356.20343017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_APLKSKM(Oxidation (M))IY_	ENSG00000125868|ENST00000246069|DSTN;ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65623104-65623215:-|nuORF;ENST00000602547.1_1_12:6994092-6994545:+|nuORF;nc|ENSG00000125868|P60981-2|DSTN;nc|ENSG00000165410|Q9Y281-3|CFL2	26.69291269510374	0.34280015626154364	6				NaN	NaN	0	NaN	4498	2849	7345
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7350	22.21	NaN	14688	30	0	3040.7	0.106	+			36595	SGAQPILSK	9	71	450.76078082551675	NaN	0	450.7607727050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SGAQPILSK_	ENSG00000105355|ENST00000221957|PLIN3;nc|ENSG00000105355|O60664-3|PLIN3;nc|ENSG00000105355|O60664-4|PLIN3	112.2953585152457	0.007624231467206887	6				NaN	NaN	0	NaN	4499	2849	7345
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7351	22.211	NaN	6728.4	30	0	782.85	0.036	+			6211	AVQRTLLEK	9	70	529.3208673546953	1056.6271817761906	2	529.3219604492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AVQRTLLEK_	ENSG00000002586|ENST00000381192|CD99;ENST00000381177.6_1_X:2656215-2658842:+|nuORF;nc|ENSG00000292348|P14209-3|CD99	93.5975768576971	0.05472259948179787	6				NaN	NaN	0	NaN	4500	2849	7345
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7352	22.212	NaN	44802	30	0	26725	0.143				-1	 	0	59	327.1936362007552	978.5590792024656	3	327.1941833496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4501	2849	7345
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7371	22.248	NaN	112060	30	0	66758	0.167			+	12220	GARQKRKK	8	65	324.54576397168256	970.6154625152477	3	324.54632568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GARQKRKK_	REV__CCAR2|p.L505*|5|0.17|ENSG00000158941|chr8:22615811-22615811|C/-|frameshift_variant;REV__CCAR2|p.R417Gfs*89|3|0.26|ENSG00000158941|chr8:22615462-22615462|C/-|frameshift_variant;REV__ENSG00000158941|ENST00000308511|CCAR2;REV__nc|ENSG00000158941|Q8N163-2|CCAR2	63.30626980617807	0.4690498839812213	6				NaN	NaN	0	NaN	4517	2852	7370
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7372	22.251	NaN	87961	30	0	9784	0.106	+			40367	STTTGHLIYK	10	118	560.802721834271	1119.5908907353419	2	560.8035278320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STTTGHLIYK_	EEF1A1|p.P263Lfs*27|1|0.36|ENSG00000156508|chr6:73518595-73518595|G/-|frameshift_variant;EEF1A2|p.T239Hfs*50|1|0.26|ENSG00000101210|chr20:63493194-63493195|-/G|frameshift_variant;EEF1A2|p.T239Rfs*40|1|0.31|ENSG00000101210|chr20:63493195-63493195|G/-|frameshift_variant;ENSG00000101210|ENST00000217182|EEF1A2;ENSG00000156508|ENST00000309268|EEF1A1;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	124.08010499294276	0.021567188538240013	6				NaN	NaN	0	NaN	4518	2852	7370
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7373	22.253	NaN	21784	30	0	5870.8	0.106			+	43397	TGGVLIKK	8	79	408.2705274134079	814.5265018936158	2	408.2707824707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TGGVLIKK_	REV__tr|U7STA6|U7STA6_FUSNUDNAmismatchrepairproteinMutSOS=FusobacteriumnucleatumCTI-5OX=1316586GN=mutSPE=3SV=1	82.30502934623384	0.30436709589983096	6				NaN	NaN	0	NaN	4519	2852	7370
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7374	22.255	NaN	26594	30	0	4378.3	0.106	+			36646	SGLGVEDLK	9	80	459.251057685042	916.487562436884	2	459.74456787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SGLGVEDLK_	ENSG00000275066|ENST00000612223|SYNRG;nc|ENSG00000275066|Q9UMZ2-3|SYNRG;nc|ENSG00000275066|Q9UMZ2-4|SYNRG;nc|ENSG00000275066|Q9UMZ2-5|SYNRG;nc|ENSG00000275066|Q9UMZ2-6|SYNRG;nc|ENSG00000275066|Q9UMZ2-7|SYNRG;nc|ENSG00000275066|Q9UMZ2-8|SYNRG;nc|ENSG00000275066|Q9UMZ2-9|SYNRG	47.657333605630114	0.33044192980041115	6				NaN	NaN	0	NaN	4520	2852	7370
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7375	22.257	NaN	16895	30	0	10750	0.106	+			283	AAPATRAAL	9	64	421.2480078949722	NaN	0	421.2479248046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AAPATRAAL_	ENSG00000139370|ENST00000266771|SLC15A4	87.69643885390035	0.04624013146650493	6				NaN	NaN	0	NaN	4521	2852	7370
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7376	22.259	NaN	9510.3	30	0	1468	0.106	+			22048	KSISDWRV	8	70	495.7726722410013	989.5307915488027	2	496.2743225097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KSISDWRV_	ENSG00000125247|ENST00000342624|TMTC4;ENST00000462211.5_1_13:101277731-101294530:-|nuORF;ENST00000489713.5_1_13:101277731-101290025:-|nuORF;nc|ENSG00000125247|Q5T4D3-2|TMTC4;nc|ENSG00000125247|Q5T4D3-4|TMTC4;nc|ENSG00000125247|Q5T4D3|TMTC4;TMTC4|p.N491Tfs*19|1|0.36|ENSG00000125247|chr13:100626128-100626128|T/-|frameshift_variant	42.396135135203025	0.6414440140393314	6				NaN	NaN	0	NaN	4522	2852	7370
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7377	22.26	NaN	15080	30	0	3721	0.034	+			6367	AVTTVVNPK	9	61	464.7762530180526	927.5379531029052	2	464.77630615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AVTTVVNPK_	ENSG00000150093|ENST00000302278|ITGB1	115.49404669440601	0.023927554121326553	6				NaN	NaN	0	NaN	4523	2852	7370
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7395	22.297	NaN	12588	30	0	4326.5	0.214	+			39581	STGNMVISK	9	75	468.74387345528766	935.4731939773753	2	468.7442321777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STGNMVISK_	ENSG00000102837|ENST00000219022|OLFM4	96.66504779109242	0.04607440320619715	6				NaN	NaN	0	NaN	4538	2855	7394
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7396	22.301	NaN	7896.5	30	0	968.62	0.106				-1	 	0	64	471.8203964660242	941.6262399988484	2	471.8205871582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4539	2855	7394
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7397	22.303	NaN	12438	30	0	1992.7	0.106			+	23843	LDAEKQAAL	9	72	479.7630542641109	957.5115555950218	2	479.76348876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LDAEKQAAL_	REV__ENSG00000174547|ENST00000310999|MRPL11;REV__ENST00000524576.5_1_11:66203480-66233392:-|nuORF;REV__nc|ENSG00000174547|Q9Y3B7-2|MRPL11	88.17693792209575	0.07000514020414955	6				NaN	NaN	0	NaN	4540	2855	7394
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7398	22.304	NaN	26939	30	0	8625.9	0.106	+			21301	KLSLDDVQ	8	78	459.251057685042	916.487562436884	2	459.2502136230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KLSLDDVQ_	ENSG00000164190|ENST00000282516|NIPBL;ENST00000504430.5_1_5:36961623-36995905:+|nuORF;nc|ENSG00000164190|Q6KC79-2|NIPBL;nc|ENSG00000164190|Q6KC79-3|NIPBL;NIPBL|p.F1423Lfs*15|1|0.43|ENSG00000164190|chr5:37008032-37008032|T/-|frameshift_variant;NIPBL|p.I2776Lfs*3|1|0.17|ENSG00000164190|chr5:37064797-37064797|A/-|frameshift_variant;NIPBL|p.L2220Ffs*3|1|0.21|ENSG00000164190|chr5:37048567-37048568|-/T|frameshift_variant	69.6276240434122	0.4100012001731381	6				NaN	NaN	0	NaN	4541	2855	7394
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7399	22.306	NaN	4495.1	30	0	274.78	0.106			+	13908	GRKPAPAP	8	53	397.237361937301	792.460170941402	2	397.2375793457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GRKPAPAP_	REV__ENSG00000129028|ENST00000249861|THAP10	15.63621529709179	0.7929342111279789	6				NaN	NaN	0	NaN	4542	2855	7394
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7400	22.308	NaN	8122	30	0	1338.2	0.036	+			32864	RDCLRSFTD	9	67	556.7626271786346	1111.510701424069	2	556.7636108398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RDCLRSFTD_	ENSG00000140455|ENST00000380324|USP3;nc|ENSG00000140455|Q9Y6I4-2|USP3	49.44154591367651	0.3095138337212152	6				NaN	NaN	0	NaN	4543	2855	7394
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7401	22.309	NaN	10621	30	0	1101.7	0.142	+			46316	VEKGKKREQ	9	78	551.3217135598817	1100.6288741865633	2	551.322509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VEKGKKREQ_	ENST00000525126.5_2_11:111428322-111431180:+|nuORF	49.536043120802724	0.308405419312776	6				NaN	NaN	0	NaN	4544	2855	7394
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7420	22.346	NaN	31661	30	0	11011	0.214			+	35563	SAWPGAER	8	81	437.2139666918327	872.4133804504654	2	437.21435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAWPGAER_	REV__ENST00000492605.5_1_7:44116036-44116168:-|nuORF	63.30626980617807	0.4690498839812213	6				NaN	NaN	0	NaN	4560	2858	7419
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7421	22.35	NaN	19103	30	0	5285.6	0.106	+			34901	SAADLDNRFRK	11	67	431.56121783921776	1291.6618241178533	3	431.5616760253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAADLDNRFRK_	ENSG00000169047|ENST00000305123|IRS1;IRS1|p.H598Tfs*38|3|0.31|ENSG00000169047|chr2:226796948-226796948|C/-|frameshift_variant	34.08650109265054	0.6322515996262609	6				NaN	NaN	0	NaN	4561	2858	7419
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7422	22.352	NaN	67275	30	0	14874	0.106	+			39719	STIPSTAMHTR	11	85	401.2044163923111	1200.5914197771333	3	401.2048034667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STIPSTAMHTR_	ENSG00000145113|ENST00000463781|MUC4;MUC4|p.N4902Tfs*8|1|0.37|ENSG00000145113|chr3:195761027-195761027|T/-|frameshift_variant;nc|ENSG00000145113|Q99102-10|MUC4;nc|ENSG00000145113|Q99102-11|MUC4;nc|ENSG00000145113|Q99102-13|MUC4;nc|ENSG00000145113|Q99102-15|MUC4;nc|ENSG00000145113|Q99102-16|MUC4;nc|ENSG00000145113|Q99102-17|MUC4;nc|ENSG00000145113|Q99102-2|MUC4;nc|ENSG00000145113|Q99102-3|MUC4;nc|ENSG00000145113|Q99102-5|MUC4;nc|ENSG00000145113|Q99102-7|MUC4;nc|ENSG00000145113|Q99102-8|MUC4;nc|ENSG00000145113|Q99102-9|MUC4	72.09557110113691	0.21826960075221502	6				NaN	NaN	0	NaN	4562	2858	7419
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7423	22.354	NaN	8063.4	30	0	1349.2	0.106	+			6404	AVVGPVGAGK	10	57	427.75768641462	853.5008198960401	2	427.75830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVVGPVGAGK_	ABCC4|p.L883Wfs*7|2|0.22|ENSG00000125257|chr13:95083178-95083178|A/-|frameshift_variant;ABCC4|p.T775Rfs*21|1|0.09|ENSG00000125257|chr13:95161322-95161323|-/AGTATGTCTT|frameshift_variant;ABCC6|p.L780Wfs*31|1|0.44|ENSG00000091262|chr16:16178875-16178875|G/-|frameshift_variant;ENSG00000091262|ENST00000205557|ABCC6;ENSG00000125257|ENST00000645237|ABCC4;nc|ENSG00000091262|O95255-3|ABCC6;nc|ENSG00000125257|O15439-2|ABCC4;nc|ENSG00000125257|O15439-3|ABCC4;nc|ENSG00000125257|O15439-4|ABCC4	73.97473282117947	0.24484687617201792	6				NaN	NaN	0	NaN	4563	2858	7419
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7424	22.356	NaN	17193	30	0	2000.3	0.106	+			43590	TIIDKSKAV	9	78	487.79710858598037	973.5796642387608	2	487.7975158691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TIIDKSKAV_	ENSG00000134240|ENST00000369406|HMGCS2;HMGCS2|p.I277Sfs*22|1|0.26|ENSG00000134240|chr1:119759139-119759139|T/-|frameshift_variant;nc|ENSG00000134240|P54868-2|HMGCS2;nc|ENSG00000134240|P54868-3|HMGCS2	106.68306549817024	0.032382560583716295	6				NaN	NaN	0	NaN	4564	2858	7419
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7425	22.357	NaN	15572	30	0	5238.9	0.035	+			30607	QARAAVDTY	9	77	497.75108493151225	NaN	0	497.75140380859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QARAAVDTY_	ENSG00000196126|ENST00000360004|HLA-DRB1	98.62937762414208	0.024200618960070384	6				NaN	NaN	0	NaN	4565	2858	7419
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7426	22.358	NaN	25703	30	0	9813	0.144			+	-1	ASWGSHCFLV	10	90	388.5156610783097	1162.525153835129	3	388.51617431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_ASWGSHC(Carbamidomethyl (C))FLV_	REV__ENST00000586325.5_1_17:76374746-76376988:+|nuORF	35.15202426646627	0.5927656479315102	6				NaN	NaN	0	NaN	4566	2858	7419
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7444	22.397	NaN	35455	30	0	4295	0.214			+	-1	RLDECIQQ	8	89	531.2555715617825	1060.496590190365	2	531.3107299804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_RLDEC(Carbamidomethyl (C))IQQ_	REV__ENSG00000115523|ENST00000263863|GNLY;REV__ENST00000489980.5_1_2:85924472-85925694:+|nuORF;REV__nc|ENSG00000115523|P22749-2|GNLY	82.24051045832904	0.30490469762271794	6				NaN	NaN	0	NaN	4581	2861	7443
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7445	22.401	NaN	30431	30	0	6157.1	0.106	+			41216	SVLEMILP	8	86	451.2563588469981	900.4981647607963	2	451.2577819824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVLEMILP_	ENST00000359195.3_1_7:106505947-106508023:+|nuORF	33.51558372728122	0.7005509609380386	6				NaN	NaN	0	NaN	4582	2861	7443
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7446	22.403	NaN	40772	30	0	13629	0.106	+			31621	QMELMEYK	8	100	363.16466765398724	1086.4721735621617	3	363.1653137207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_QMELM(Oxidation (M))EYK_	ENSG00000116852|ENST00000461742|KIF21B;ENSG00000139116|ENST00000361418|KIF21A;KIF21A|p.L1270Sfs*13|1|0.12|ENSG00000139116|chr12:39318174-39318175|-/G|frameshift_variant;KIF21A|p.N748Ifs*9|1|0.3|ENSG00000139116|chr12:39340232-39340232|T/-|frameshift_variant;KIF21A|p.P1541Lfs*6|1|0.27|ENSG00000139116|chr12:39303074-39303074|G/-|frameshift_variant;KIF21A|p.S524Lfs*15|1|0.26|ENSG00000139116|chr12:39351880-39351880|A/-|frameshift_variant;KIF21A|p.V717Lfs*12|4|0.32|ENSG00000139116|chr12:39340327-39340327|T/-|frameshift_variant;KIF21B|p.G528Afs*13|1|0.43|ENSG00000116852|chr1:201000492-201000492|C/-|frameshift_variant;nc|ENSG00000116852|O75037-2|KIF21B;nc|ENSG00000116852|O75037-3|KIF21B;nc|ENSG00000116852|O75037|KIF21B;nc|ENSG00000139116|Q7Z4S6-2|KIF21A;nc|ENSG00000139116|Q7Z4S6-3|KIF21A;nc|ENSG00000139116|Q7Z4S6-4|KIF21A;nc|ENSG00000139116|Q7Z4S6-5|KIF21A;nc|ENSG00000139116|Q7Z4S6-6|KIF21A	62.107414245175825	0.4809183816468817	6				NaN	NaN	0	NaN	4583	2861	7443
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7447	22.405	NaN	7776.2	30	0	2097.2	0.106	+			46835	VIEHIQVNK	9	64	360.5447672010626	1078.6124722033878	3	360.5450744628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VIEHIQVNK_	ENSG00000265681|ENST00000580261|RPL17;ENST00000394133.2_1_10:95043842-95044274:-|nuORF;ENST00000414070.1_1_1:109535017-109535455:+|nuORF;ENST00000446498.1_1_1:26781156-26781564:-|nuORF;nc|ENSG00000265681|P18621-2|RPL17;nc|ENSG00000265681|P18621-3|RPL17	42.396135135203025	0.392153681582562	6				NaN	NaN	0	NaN	4584	2861	7443
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7448	22.407	NaN	6626.3	30	0	590.02	0.106	+			46836	VIEHIQVNK	9	70	540.314055983137	1078.613559033074	2	540.3145751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VIEHIQVNK_	ENSG00000265681|ENST00000580261|RPL17;ENST00000394133.2_1_10:95043842-95044274:-|nuORF;ENST00000414070.1_1_1:109535017-109535455:+|nuORF;ENST00000446498.1_1_1:26781156-26781564:-|nuORF;nc|ENSG00000265681|P18621-2|RPL17;nc|ENSG00000265681|P18621-3|RPL17	110.11987700582712	0.028875675806141952	6				NaN	NaN	0	NaN	4585	2861	7443
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7449	22.408	NaN	15277	30	0	1707.2	0.036	+			12178	GAMEHFHMK	9	89	544.243755022631	1086.472957112062	2	544.244873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GAMEHFHMK_	ENSG00000185825|ENST00000345046|BCAP31;nc|ENSG00000185825|P51572-2|BCAP31	117.81106730687013	0.02252488733980868	6				NaN	NaN	0	NaN	4586	2861	7443
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7450	22.409	NaN	18875	30	0	6860.6	0.14	+			7957	DSPAGKTNAL	10	70	487.2508456665199	NaN	0	487.2508850097656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DSPAGKTNAL_	ENSG00000132849|ENST00000642238|PATJ;ENST00000459752.5_1_1:62228564-62579919:+|nuORF;ENST00000484562.5_1_1:62228564-62579919:+|nuORF;nc|ENSG00000132849|Q8NI35-2|PATJ;nc|ENSG00000132849|Q8NI35-3|PATJ;nc|ENSG00000132849|Q8NI35-4|PATJ;nc|ENSG00000132849|Q8NI35-5|PATJ;nc|ENSG00000132849|Q8NI35|PATJ	93.5975768576971	0.04026034934357614	6				NaN	NaN	0	NaN	4587	2861	7443
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7468	22.449	NaN	36491	30	0	16020	0.214	+			946	AEIRVHTV	8	73	462.7660870645924	923.5176211959848	2	462.7665100097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEIRVHTV_	ENSG00000135624|ENST00000258091|CCT7;nc|ENSG00000135624|Q99832-2|CCT7;nc|ENSG00000135624|Q99832-3|CCT7;nc|ENSG00000135624|Q99832-4|CCT7	67.49366992349736	0.4277823096851425	6				NaN	NaN	0	NaN	4602	2864	7467
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7469	22.452	NaN	22038	30	0	4001.1	0.106	+			33156	RESTGAQVQV	10	79	537.7799967867497	1073.5454406402994	2	537.7808837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RESTGAQVQV_	ENSG00000169564|ENST00000303577|PCBP1;ENSG00000183570|ENST00000681687|PCBP3;ENSG00000197111|ENST00000546463|PCBP2;ENST00000468429.5_1_21:47321003-47359956:+|nuORF;ENST00000547717.1_1_12:53848575-53861193:+|nuORF;nc|ENSG00000183570|P57721-2|PCBP3;nc|ENSG00000183570|P57721-3|PCBP3;nc|ENSG00000183570|P57721-4|PCBP3;nc|ENSG00000183570|P57721-5|PCBP3;nc|ENSG00000197111|Q15366-2|PCBP2;nc|ENSG00000197111|Q15366-4|PCBP2;nc|ENSG00000197111|Q15366-5|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;nc|ENSG00000197111|Q15366-7|PCBP2;nc|ENSG00000197111|Q15366-8|PCBP2;nc|ENSG00000197111|Q15366|PCBP2;PCBP2|p.T202Kfs*26|1|0.32|ENSG00000197111|chr12:53464773-53464773|C/-|frameshift_variant	90.14881205920913	0.1302219035121668	6				NaN	NaN	0	NaN	4603	2864	7467
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7470	22.454	NaN	6253.2	30	0	715.1	0.106	+			36678	SGMQNMSIHTK	11	65	411.86140802492923	1232.5623946749877	3	411.8619384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SGMQNMSIHTK_	CON__H-INV:HIT000292931;CON__P05787;CON__REFSEQ:XP_092267;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	65.69465075029274	0.27262252711350304	6				NaN	NaN	0	NaN	4604	2864	7467
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7471	22.456	NaN	8688.8	30	0	1954.5	0.106				-1	AVRYLMHVPG	10	66	386.8742879747207	1157.6010345243621	3	386.87445068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_AVRYLM(Oxidation (M))HVPG_	ENSG00000167930|ENST00000399932|FAM234A;nc|ENSG00000167930|Q9H0X4-2|FAM234A	29.170058357718403	0.6416167986984785	6				NaN	NaN	0	NaN	4605	2864	7467
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7472	22.458	NaN	34551	30	0	20547	0.106	+			25063	LLLEKMGGSS	10	45	345.52403907202995	1033.55028781629	3	345.5247802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LLLEKMGGSS_	ENSG00000149476|ENST00000394900|TKFC;ENST00000525366.5_1_11:61112793-61112862:+|nuORF;nc|ENSG00000149476|Q3LXA3-2|TKFC	23.04248740728303	0.69165701907106	6				NaN	NaN	0	NaN	4606	2864	7467
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7473	22.46	NaN	4323.9	30	0	643.89	0.034	+			38796	SSMSTALSK	9	61	456.22799949576535	910.4414460583307	2	456.228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSMSTALSK_	nc|ENSG00000138119|Q9NZM1-3|MYOF	80.45461616416974	0.09558281504443908	6				NaN	NaN	0	NaN	4607	2864	7467
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7474	22.46	NaN	7986.5	30	0	1162.9	0.141	+			29446	PCLENMTTAP	10	65	546.7377047218688	1091.4608565105375	2	546.7390747070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_PCLENM(Oxidation (M))TTAP_	ENSG00000182957|ENST00000382108|SPATA13;ENST00000466831.2_1_13:24796959-24798912:+|nuORF	47.657333605630114	0.47858658696240314	6				NaN	NaN	0	NaN	4608	2864	7467
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7492	22.5	NaN	290790	30	0	69604	0.141	+			38184	SQCGSLIGK	9	88	475.24136819272434	948.4681834522487	2	475.24176025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SQC(Carbamidomethyl (C))GSLIGK_	ENSG00000090097|ENST00000461554|PCBP4;ENSG00000183570|ENST00000681687|PCBP3;ENSG00000197111|ENST00000546463|PCBP2;ENST00000468429.5_1_21:47321003-47359956:+|nuORF;ENST00000492809.5_1_3:51992079-51994784:-|nuORF;ENST00000497390.5_1_3:51992079-51994784:-|nuORF;ENST00000547717.1_1_12:53848575-53861193:+|nuORF;ENST00000548190.1_1_12:53849722-53854210:+|nuORF;nc|ENSG00000090097|P57723-2|PCBP4;nc|ENSG00000183570|P57721-2|PCBP3;nc|ENSG00000183570|P57721-3|PCBP3;nc|ENSG00000183570|P57721-4|PCBP3;nc|ENSG00000183570|P57721-5|PCBP3;nc|ENSG00000197111|Q15366-2|PCBP2;nc|ENSG00000197111|Q15366-4|PCBP2;nc|ENSG00000197111|Q15366-5|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;nc|ENSG00000197111|Q15366-7|PCBP2;nc|ENSG00000197111|Q15366-8|PCBP2;nc|ENSG00000197111|Q15366|PCBP2;PCBP2|p.T202Kfs*26|1|0.32|ENSG00000197111|chr12:53464773-53464773|C/-|frameshift_variant;PCBP4|p.G203Efs*11|1|0.1|ENSG00000090097|chr3:51959397-51959398|-/CTCT|frameshift_variant	120.30596017624542	0.02101454110788768	6				NaN	NaN	0	NaN	4623	2867	7491
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7493	22.502	NaN	69500	30	0	6551	0.106				-1	 	0	116	470.28429978954205	938.5540466458841	2	470.2845458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4624	2867	7491
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7494	22.504	NaN	46418	30	0	4708	0.106	+			35302	SAMERICEK	9	104	533.7537504832513	1065.4929480333026	2	533.7548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAMERICEK_	ENSG00000169710|ENST00000306749|FASN;FASN|p.A2037V|1|0.35|ENSG00000169710|chr17:82082062-82082062|G/A|missense_variant;FASN|p.R2049Q|1|0.55|ENSG00000169710|chr17:82082026-82082026|C/T|missense_variant	117.5257442709337	0.022697614825424036	6				NaN	NaN	0	NaN	4625	2867	7491
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7495	22.506	NaN	18676	30	0	3947.7	0.106				-1	 	0	82	447.7369923659076	893.4594317986152	2	447.73736572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4626	2867	7491
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7496	22.508	NaN	14804	30	0	1761	0.106				-1	 	0	72	502.228660847182	1002.4427687611641	2	502.2291259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4627	2867	7491
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7497	22.509	NaN	18094	30	0	4029.1	0.106	+			35320	SAMSNPRAM	9	84	482.7195852452537	963.4246175573074	2	482.7203674316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SAMSNPRAM_	ENSG00000135018|ENST00000376395|UBQLN1;ENSG00000188021|ENST00000338222|UBQLN2;nc|ENSG00000135018|Q9UMX0-2|UBQLN1;nc|ENSG00000135018|Q9UMX0-3|UBQLN1;UBQLN2|p.P525Lfs*71|10|0.37|ENSG00000188021|chrX:56565441-56565441|C/-|frameshift_variant	109.47833844074708	0.029530294723441826	6				NaN	NaN	0	NaN	4628	2867	7491
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7498	22.511	NaN	27723	30	0	8273.5	0.037				-1	 	0	88	364.18868865063024	1089.5442365520908	3	364.1889953613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4629	2867	7491
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7516	22.549	NaN	33992	30	0	19249	0.214	+			6427	AVVSIPRQLPG	11	70	379.5640884249833	1135.67043587515	3	379.5643005371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVVSIPRQLPG_	nc|ENSG00000168003|P08195-3|SLC3A2;nc|ENSG00000168003|P08195-4|SLC3A2;nc|ENSG00000168003|P08195-5|SLC3A2;nc|ENSG00000168003|P08195|SLC3A2	38.753607047826485	0.5749975102143227	6				NaN	NaN	0	NaN	4644	2870	7515
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7517	22.552	NaN	18119	30	0	3922.6	0.106	+			41000	SVGQTVITK	9	77	466.77377150867403	931.5329900841481	2	466.7740173339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVGQTVITK_	ENSG00000107077|ENST00000381309|KDM4C;nc|ENSG00000293552|Q9H3R0-2|KDM4C	112.2953585152457	0.026655838328212944	6				NaN	NaN	0	NaN	4645	2870	7515
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7518	22.555	NaN	88322	30	0	36458	0.106				-1	 	0	83	327.5362457341295	979.5869078025886	3	327.536865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4646	2870	7515
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7519	22.556	NaN	63452	30	0	34138	0.106	+			32342	QTVQGTFSK	9	86	498.2609885843681	994.5074242355362	2	498.2613830566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QTVQGTFSK_	ENSG00000188112|ENST00000341865|C6orf132;nc|nan|Q5T0Z8-2|C6orf132;nc|nan|Q5T0Z8-4|C6orf132	96.66504779109242	0.04607440320619715	6				NaN	NaN	0	NaN	4647	2870	7515
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7520	22.558	NaN	8028.2	30	0	652.52	0.106			+	47225	VMIFHSSCI	9	84	547.261825248174	1092.5090975631479	2	547.2626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_VMIFHSSC(Carbamidomethyl (C))I_	REV__nc|ENSG00000225997|P0C604|OR4A8	60.29395666154354	0.21116425950210296	6				NaN	NaN	0	NaN	4648	2870	7515
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7521	22.56	NaN	14927	30	0	8026.1	0.036				-1	 	0	56	347.544680496949	1039.612212091047	3	347.5452575683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4649	2870	7515
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7522	22.561	NaN	12303	30	0	2356.8	0.138	+			16041	HAVGPSTAM	9	68	435.7099718434836	869.4053907537672	2	435.7103576660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HAVGPSTAM_	ENSG00000196628|ENST00000354452|TCF4;ENST00000562680.5_1_18:52899738-53018213:-|nuORF;nc|ENSG00000196628|P15884-10|TCF4;nc|ENSG00000196628|P15884-11|TCF4;nc|ENSG00000196628|P15884-12|TCF4;nc|ENSG00000196628|P15884-13|TCF4;nc|ENSG00000196628|P15884-14|TCF4;nc|ENSG00000196628|P15884-15|TCF4;nc|ENSG00000196628|P15884-16|TCF4;nc|ENSG00000196628|P15884-2|TCF4;nc|ENSG00000196628|P15884-4|TCF4;nc|ENSG00000196628|P15884-5|TCF4;nc|ENSG00000196628|P15884-6|TCF4;nc|ENSG00000196628|P15884-7|TCF4;nc|ENSG00000196628|P15884-8|TCF4;nc|ENSG00000196628|P15884-9|TCF4;nc|ENSG00000196628|P15884|TCF4;TCF4|p.R401W|1|0.08|ENSG00000196628|chr18:55254646-55254646|G/A|missense_variant	76.84663266511073	0.11118375776443899	6				NaN	NaN	0	NaN	4650	2870	7515
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7540	22.599	NaN	74321	30	0	24848	0.214				-1	MMTAMRAR	8	88	500.2287922457571	998.4430315583143	2	500.22882080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_M(Oxidation (M))MTAM(Oxidation (M))RAR_	ARMCX3|p.M38Wfs*36|1|0.27|ENSG00000102401|chrX:101625086-101625086|A/-|frameshift_variant	57.81127852772723	0.5234495074909924	6				NaN	NaN	0	NaN	4665	2873	7539
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7541	22.602	NaN	78246	30	0	7141.9	0.106	+			33327	RGSLNEQIAL	10	93	550.8059089501858	1099.5972649671714	2	550.8070678710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RGSLNEQIAL_	ENSG00000107897|ENST00000396271|ACBD5;nc|ENSG00000107897|Q5T8D3-2|ACBD5;nc|ENSG00000107897|Q5T8D3-4|ACBD5;nc|ENSG00000107897|Q5T8D3|ACBD5	80.45461616416974	0.1919067876629769	6				NaN	NaN	0	NaN	4666	2873	7539
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7542	22.604	NaN	16342	30	0	1092.8	0.106	+			3387	ASQCGSLIGK	10	87	510.7596768835607	1019.5048008339214	2	510.7608947753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_ASQC(Carbamidomethyl (C))GSLIGK_	ENSG00000090097|ENST00000461554|PCBP4;ENSG00000183570|ENST00000681687|PCBP3;ENSG00000197111|ENST00000546463|PCBP2;ENST00000468429.5_1_21:47321003-47359956:+|nuORF;ENST00000492809.5_1_3:51992079-51994784:-|nuORF;ENST00000497390.5_1_3:51992079-51994784:-|nuORF;ENST00000547717.1_1_12:53848575-53861193:+|nuORF;ENST00000548190.1_1_12:53849722-53854210:+|nuORF;nc|ENSG00000090097|P57723-2|PCBP4;nc|ENSG00000183570|P57721-2|PCBP3;nc|ENSG00000183570|P57721-3|PCBP3;nc|ENSG00000183570|P57721-4|PCBP3;nc|ENSG00000183570|P57721-5|PCBP3;nc|ENSG00000197111|Q15366-2|PCBP2;nc|ENSG00000197111|Q15366-4|PCBP2;nc|ENSG00000197111|Q15366-5|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;nc|ENSG00000197111|Q15366-7|PCBP2;nc|ENSG00000197111|Q15366-8|PCBP2;nc|ENSG00000197111|Q15366|PCBP2;PCBP2|p.T202Kfs*26|1|0.32|ENSG00000197111|chr12:53464773-53464773|C/-|frameshift_variant;PCBP4|p.G203Efs*11|1|0.1|ENSG00000090097|chr3:51959397-51959398|-/CTCT|frameshift_variant	102.0615471778698	0.07157459376830236	6				NaN	NaN	0	NaN	4667	2873	7539
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7543	22.606	NaN	59434	30	0	9198.5	0.106				-1	 	0	115	417.906123633011	1250.696541499233	3	417.90667724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4668	2873	7539
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7544	22.608	NaN	31063	30	0	7781.2	0.106				-1	 	0	75	343.540928512356	1027.600956137268	3	343.5414733886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4669	2873	7539
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7545	22.61	NaN	20046	30	0	4711.2	0.034	+			5832	AVIGNVQEK	9	69	479.27124939068636	956.5279458481727	2	479.2716979980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AVIGNVQEK_	ENSG00000124786|ENST00000644923|SLC35B3;nc|ENSG00000124786|Q9H1N7-3|SLC35B3	124.08010499294276	0.018729767491916592	6				NaN	NaN	0	NaN	4670	2873	7539
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7546	22.61	NaN	31471	30	0	6232.5	0.138				-1	 	0	100	445.25252000621145	888.4904870792229	2	445.2530517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4671	2873	7539
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7564	22.648	NaN	57951	30	0	5724.4	0.203	+			45737	VADPETRTV	9	104	494.2583507649666	986.5021485967333	2	494.25872802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VADPETRTV_	ENSG00000039650|ENST00000322344|PNKP;ENST00000593946.5_1_19:50364507-50370327:-|nuORF;ENST00000594661.5_1_19:50367579-50369988:-|nuORF;ENST00000595792.1_1_19:50369586-50370764:-|nuORF;nc|ENSG00000039650|Q96T60-2|PNKP	68.84614121027924	0.14577793175421136	6				NaN	NaN	0	NaN	4686	2876	7563
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7565	22.652	NaN	14299	30	0	2283.4	0.106				-1	 	0	78	578.778931462799	1155.543309992398	2	578.77978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4687	2876	7563
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7566	22.654	NaN	27816	30	0	3262.8	0.106	+			10247	ETKLKITQL	9	88	537.3312824898956	1072.648012046591	2	537.3322143554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ETKLKITQL_	ENSG00000170571|ENST00000303221|EMB;ENST00000505896.5_1_5:49695109-49707239:-|nuORF;nc|ENSG00000170571|Q6PCB8-2|EMB	88.17693792209575	0.07000514020414955	6				NaN	NaN	0	NaN	4688	2876	7563
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7567	22.656	NaN	40482	30	0	12019	0.106				-1	 	0	88	560.2744412026102	1118.5343294720203	2	560.2753295898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4689	2876	7563
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7568	22.657	NaN	49694	30	0	25478	0.106				-1	 	0	87	346.52512929398586	1036.5535584821575	3	346.525634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4690	2876	7563
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7569	22.659	NaN	30153	30	0	5945.1	0.106	+			11531	FPEEDKKTY	9	101	386.18873961440505	1155.5443894434152	3	386.1887512207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FPEEDKKTY_	ENSG00000151366|ENST00000281031|NDUFC2;nc|ENSG00000151366|O95298-2|NDUFC2	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	4691	2876	7563
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7570	22.661	NaN	8826.3	30	0	1877.9	0.034	+			5028	ATSDMDIGK	9	70	469.2178320397919	936.4211111463839	2	469.2181701660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATSDMDIGK_	ENSG00000102158|ENST00000618282|MAGT1	60.11826168202944	0.21262886028301267	6				NaN	NaN	0	NaN	4692	2876	7563
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7588	22.698	NaN	47157	30	0	10666	0.214	+			15046	GTNPGIITK	9	88	450.7605803072788	899.5066076813577	2	450.7608642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTNPGIITK_	ENSG00000136247|ENST00000335965|ZDHHC4;ENST00000474097.5_1_7:6620192-6623202:+|nuORF	131.61620852596164	0.014413238321579053	6				NaN	NaN	0	NaN	4707	2879	7587
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7589	22.701	NaN	49543	30	0	17221	0.106	+			47723	VSFSRPLQDV	10	83	383.20814563945146	1146.6026075185544	3	383.2083435058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSFSRPLQDV_	ENSG00000154358|ENST00000680850|OBSCN;nc|ENSG00000154358|Q5VST9-2|OBSCN;nc|ENSG00000154358|Q5VST9-3|OBSCN;nc|ENSG00000154358|Q5VST9-5|OBSCN;nc|ENSG00000154358|Q5VST9-6|OBSCN;nc|ENSG00000154358|Q5VST9|OBSCN;OBSCN|p.E4688Dfs*35|1|0.03|ENSG00000154358|chr1:228318105-228318106|-/CATCTTC|frameshift_variant;OBSCN|p.E4729Rfs*7|1|0.37|ENSG00000154358|chr1:228318930-228318931|-/C|frameshift_variant;OBSCN|p.H7050Tfs*22|1|0.11|ENSG00000154358|chr1:228371922-228371922|C/-|frameshift_variant;OBSCN|p.P6994Lfs*78|1|0.15|ENSG00000154358|chr1:228371756-228371756|C/-|frameshift_variant;OBSCN|p.S5232Ffs*24|1|0.21|ENSG00000154358|chr1:228332900-228332901|-/T|frameshift_variant;OBSCN|p.V2551I|1|0.34|ENSG00000154358|chr1:228280075-228280075|G/A|missense_variant;OBSCN|p.V3709Sfs*15|1|0.03|ENSG00000154358|chr1:228293609-228293610|-/A|frameshift_variant	35.17822180527639	0.5925517082438457	6				NaN	NaN	0	NaN	4708	2879	7587
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7590	22.704	NaN	20540	30	0	6497.5	0.106				-1	 	0	62	337.5266252641122	1009.5580463925367	3	337.52716064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4709	2879	7587
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7591	22.705	NaN	7478.4	30	0	797.12	0.106	+			33828	RQTSILIQK	9	82	543.8345404303311	1085.6545279274621	2	543.8353271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RQTSILIQK_	ENSG00000164266|ENST00000296695|SPINK1	63.53385203322761	0.18415635464017938	6				NaN	NaN	0	NaN	4710	2879	7587
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7592	22.707	NaN	24401	30	0	5066.5	0.106	+			44142	TQCGSLIGK	9	89	482.2491344314279	962.4837159296558	2	482.2497863769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_TQC(Carbamidomethyl (C))GSLIGK_	ENSG00000169564|ENST00000303577|PCBP1	112.10723106719422	0.02684780151337622	6				NaN	NaN	0	NaN	4711	2879	7587
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7593	22.709	NaN	48742	30	0	23924	0.036			+	41175	SVKVGRPPDP	10	68	351.20089496734346	1050.5808555022304	3	351.20135498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVKVGRPPDP_	REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-10|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-13|TTN;REV__nc|ENSG00000155657|Q8WZ42-2|TTN;REV__nc|ENSG00000155657|Q8WZ42-3|TTN;REV__nc|ENSG00000155657|Q8WZ42-4|TTN;REV__nc|ENSG00000155657|Q8WZ42-5|TTN;REV__nc|ENSG00000155657|Q8WZ42-7|TTN;REV__nc|ENSG00000155657|Q8WZ42-8|TTN;REV__nc|ENSG00000155657|Q8WZ42-9|TTN;REV__nc|ENSG00000155657|Q8WZ42|TTN;REV__TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;REV__TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;REV__TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant	26.69291269510374	0.6618461711292317	6				NaN	NaN	0	NaN	4712	2879	7587
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7594	22.71	NaN	14866	30	0	2291.6	0.139	+			42109	SYKVSTSGP	9	76	463.23436507148136	924.4541772097627	2	463.2346496582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SYKVSTSGP_	CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000550170.5_1_12:53294858-53298765:-|nuORF;ENST00000562022.1_1_15:43093683-43094592:-|nuORF;KRT8|p.R18Gfs*56|1|0.24|ENSG00000170421|chr12:52904930-52904930|G/-|frameshift_variant;nc|ENSG00000170421|P05787-2|KRT8	112.10723106719422	0.02684780151337622	6				NaN	NaN	0	NaN	4713	2879	7587
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7612	22.748	NaN	539830	30	0	78273	0.133	+			4471	ATIQGAYAR	9	89	475.75562446464573	949.4966959960915	2	475.7562561035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATIQGAYAR_	ENSG00000109736|ENST00000355443|MFSD10;ENST00000508276.1_1_4:2933242-2933551:-|nuORF;ENST00000514031.5_1_4:2932567-2933551:-|nuORF	209.83999722684857	5.2930464786782614E-08	6				NaN	NaN	0	NaN	4728	2882	7611
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7613	22.751	NaN	68342	30	0	35583	0.106	+			26039	LSLIKKKTES	10	83	382.90807428086015	1145.7023934427805	3	382.9083557128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSLIKKKTES_	TSC22D2|p.Q764Sfs*48|1|0.05|ENSG00000196428|chr3:150458583-150458583|C/-|frameshift_variant	19.996771675451527	0.7148376616046445	6				NaN	NaN	0	NaN	4729	2882	7611
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7614	22.753	NaN	30547	30	0	12970	0.106	+			37971	SPHKGSYLY	9	75	526.263506042451	1050.512459151702	2	526.2643432617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SPHKGSYLY_	ENSG00000103089|ENST00000219368|FA2H;ENST00000562145.1_1_16:74748090-74750623:-|nuORF;nc|ENSG00000103089|Q7L5A8-2|FA2H	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	4730	2882	7611
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7615	22.754	NaN	19353	30	0	8293.3	0.106				-1	KGILRCLVKQ	10	84	405.5864238994805	1213.7374422986416	3	405.5870056152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_KGILRC(Carbamidomethyl (C))LVKQ_	nc|ENSG00000115252|P54750-4|PDE1A;nc|ENSG00000115252|P54750-5|PDE1A;nc|ENSG00000115252|P54750|PDE1A	54.722347961057174	0.4138398245444204	6				NaN	NaN	0	NaN	4731	2882	7611
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7616	22.756	NaN	11908	30	0	1208	0.106			+	-1	TKGFITLC	8	86	470.250390803341	938.4862286734821	2	470.2485656738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_TKGFITLC(Carbamidomethyl (C))_	REV__ENST00000399586.2_1_X:74963520-74963610:-|nuORF	51.33545320467046	0.5859736979383976	6				NaN	NaN	0	NaN	4732	2882	7611
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7617	22.758	NaN	15117	30	0	2276.2	0.106				-1	 	0	84	487.7518421451032	973.4891313570064	2	487.7523193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4733	2882	7611
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7618	22.76	NaN	3406.9	30	0	350.15	0.106	+			40935	SVFSDKLHSK	10	67	574.3094166104861	NaN	0	574.3095092773438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVFSDKLHSK_	ENSG00000187257|ENST00000334955|RSBN1L;nc|ENSG00000187257|Q6PCB5-2|RSBN1L;PTPN12-RSBN1L|1|fusion;PTPN12-RSBN1L|2|fusion;PTPN12-RSBN1L|3|fusion;PTPN12-RSBN1L|4|fusion;PTPN12-RSBN1L|5|fusion;PTPN12-RSBN1L|6|fusion;PTPN12-RSBN1L|7|fusion;PTPN12-RSBN1L|8|fusion	48.11462884226527	0.31752207073344935	6				NaN	NaN	0	NaN	4734	2882	7611
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7619	22.762	NaN	44731	30	0	13946	0.035				-1	 	0	78	504.29700695979676	1006.5794609863935	2	504.2976989746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4735	2882	7611
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7637	22.799	NaN	73430	30	0	22310	0.174	+			31649	QMTSAEGRK	9	79	504.2516079489393	1006.4886629646786	2	504.2523193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QMTSAEGRK_	ENSG00000198104|ENST00000641644|OR2T6	115.49404669440601	0.023927554121326553	6				NaN	NaN	0	NaN	4750	2885	7636
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7638	22.802	NaN	25612	30	0	5365.4	0.106	+			34465	RTYVGSMPGR	10	91	562.2866078840059	1122.5586628348117	2	562.2876586914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RTYVGSMPGR_	ENSG00000102910|ENST00000285737|LONP2;LONP2|p.D678Efs*7|1|0.07|ENSG00000102910|chr16:48347601-48347602|-/GT|frameshift_variant;nc|ENSG00000102910|Q86WA8-2|LONP2	115.23196543181992	0.034063879665207575	6				NaN	NaN	0	NaN	4751	2885	7636
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7639	22.804	NaN	44637	30	0	4517.4	0.106	+			2913	ASAYSIAQK	9	100	469.75050904456145	NaN	0	469.7503967285156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASAYSIAQK_	ENSG00000162813|ENST00000322067|BPNT1;nc|ENSG00000162813|O95861-2|BPNT1;nc|ENSG00000162813|O95861-4|BPNT1	190.2614974402762	0.0011098154530388054	6				NaN	NaN	0	NaN	4752	2885	7636
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7640	22.806	NaN	25526	30	0	2766.1	0.106	+			1618	AGMALGIQK	9	80	452.7493489647005	903.484144996201	2	452.74945068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_AGM(Oxidation (M))ALGIQK_	ENSG00000174851|ENST00000376901|YIF1A	157.98928361386217	0.005006955008209645	6				NaN	NaN	0	NaN	4753	2885	7636
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7641	22.808	NaN	15989	30	0	5586.1	0.106			+	10166	ESVTLIAEEP	10	73	544.2794895105019	1086.5444260878037	2	544.28076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ESVTLIAEEP_	REV__ENSG00000124678|ENST00000311875|TCP11;REV__nc|ENSG00000124678|Q8WWU5-2|TCP11;REV__nc|ENSG00000124678|Q8WWU5-3|TCP11;REV__nc|ENSG00000124678|Q8WWU5-4|TCP11;REV__nc|ENSG00000124678|Q8WWU5-5|TCP11;REV__nc|ENSG00000124678|Q8WWU5-6|TCP11;REV__nc|ENSG00000124678|Q8WWU5-7|TCP11	47.95952297671804	0.47580206326914537	6				NaN	NaN	0	NaN	4754	2885	7636
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7642	22.81	NaN	9997.7	30	0	1635.5	0.106	+			49458	VVVVNPQTK	9	70	492.29618297571227	982.5778130182246	2	492.2975158691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VVVVNPQTK_	ENSG00000177733|ENST00000314940|HNRNPA0	80.45461616416974	0.09558281504443908	6				NaN	NaN	0	NaN	4755	2885	7636
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7643	22.811	NaN	6011.2	30	0	1460.3	0.038			+	-1	LYTGPELCLE	10	54	398.86199028920083	1193.5641414678025	3	398.5279235839844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_LYTGPELC(Carbamidomethyl (C))LE_	REV__ENSG00000214711|ENST00000403897|CAPN14;REV__nc|ENSG00000214711|A8MX76-2|CAPN14	36.446750945000026	0.5818864909973037	6				NaN	NaN	0	NaN	4756	2885	7636
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7661	22.849	NaN	86558	30	0	17866	0.199	+			39093	SSSSVLINK	9	85	467.76321712596365	933.5118813187273	2	467.7636413574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSSSVLINK_	ENSG00000120278|ENST00000696526|PLEKHG1	180.86945649972546	0.001208757763874378	6				NaN	NaN	0	NaN	4771	2888	7660
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7662	22.852	NaN	29827	30	0	16185	0.106	+			32616	QYNPHVHQL	9	64	568.2853822738631	1134.556211614526	2	568.2864379882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QYNPHVHQL_	DLG5|p.F1661Ifs*9|1|0.12|ENSG00000151208|chr10:77805849-77805850|-/C|frameshift_variant;ENSG00000151208|ENST00000372391|DLG5;ENST00000459739.5_1_10:79567604-79581271:-|nuORF;ENST00000463362.5_1_10:79552200-79579794:-|nuORF;ENST00000475613.6_1_10:79552200-79579275:-|nuORF;nc|ENSG00000151208|Q8TDM6-2|DLG5;nc|ENSG00000151208|Q8TDM6-4|DLG5;nc|ENSG00000151208|Q8TDM6-5|DLG5	132.757866228626	0.013877640931359021	6				NaN	NaN	0	NaN	4772	2888	7660
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7663	22.854	NaN	25398	30	0	2969.5	0.106				-1	 	0	91	508.7897267892798	1015.5649006453597	2	508.7904357910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4773	2888	7660
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7664	22.856	NaN	9198.5	30	0	3127.1	0.106	+			37972	SPHKGSYLY	9	79	526.263506042451	1050.512459151702	2	526.2644653320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SPHKGSYLY_	ENSG00000103089|ENST00000219368|FA2H;ENST00000562145.1_1_16:74748090-74750623:-|nuORF;nc|ENSG00000103089|Q7L5A8-2|FA2H	52.936696900407355	0.27249468807391813	6				NaN	NaN	0	NaN	4774	2888	7660
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7665	22.858	NaN	17255	30	0	4427.1	0.106	+			12810	GEMQKQAQL	9	77	516.7588127297499	1031.5030725262998	2	516.7597045898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GEMQKQAQL_	ENSG00000165733|ENST00000374518|BMS1	63.53385203322761	0.18415635464017938	6				NaN	NaN	0	NaN	4775	2888	7660
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7666	22.86	NaN	10723	30	0	1625	0.106			+	31414	QKLLFAARK	9	85	537.8419187675878	1073.6692846019755	2	537.8433227539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QKLLFAARK_	REV__ENSG00000130559|ENST00000389532|CAMSAP1;REV__ENST00000483991.5_1_9:138703157-138717996:-|nuORF;REV__nc|ENSG00000130559|Q5T5Y3-2|CAMSAP1;REV__nc|ENSG00000130559|Q5T5Y3-3|CAMSAP1	63.30626980617807	0.18605348971131092	6				NaN	NaN	0	NaN	4776	2888	7660
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7667	22.862	NaN	45324	30	0	9191.9	0.038	+			34284	RTLDLTYRK	9	98	389.22751089282116	1164.6607032786635	3	389.2279052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RTLDLTYRK_	ENST00000369183.8_1_10:120095785-120095896:-|nuORF	73.84112541714126	0.12417958948937492	6				NaN	NaN	0	NaN	4777	2888	7660
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7685	22.899	NaN	36667	30	0	4793.4	0.214	+			35168	SAIDSVNATSK	11	86	546.7794722281604	1091.5443915231208	2	546.7804565429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAIDSVNATSK_	ENSG00000111641|ENST00000322166|NOP2;ENST00000537708.1_1_12:6669555-6669804:-|nuORF;ENST00000544630.1_1_12:6669555-6669953:-|nuORF;nc|ENSG00000111641|P46087-2|NOP2;nc|ENSG00000111641|P46087-3|NOP2;nc|ENSG00000111641|P46087-4|NOP2	242.34549998277546	2.1231086509691004E-25	6				NaN	NaN	0	NaN	4792	2891	7684
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7686	22.902	NaN	58672	30	0	10538	0.106	+			23093	KVVDSLYNK	9	101	533.2999905019342	1064.5854280706683	2	533.3009033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVVDSLYNK_	ENSG00000108671|ENST00000261712|PSMD11;ENST00000585265.1_1_17:30807457-30807646:+|nuORF;nc|ENSG00000108671|O00231-2|PSMD11	214.23057602635166	3.58823238688865E-08	6				NaN	NaN	0	NaN	4793	2891	7684
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7687	22.904	NaN	39587	30	0	5280	0.106			+	30692	QCVCHPKGQ	9	87	500.2287922457571	998.4430315583143	2	500.7322692871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QCVCHPKGQ_	REV__ENSG00000152583|ENST00000282470|SPARCL1;REV__nc|ENSG00000152583|Q14515-2|SPARCL1	45.9519527083369	0.35044536499095585	6				NaN	NaN	0	NaN	4794	2891	7684
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7688	22.906	NaN	17792	30	0	1769	0.106	+			44117	TPYEGQRSY	9	86	550.7544626759927	NaN	0	550.7544555664062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TPYEGQRSY_	ENSG00000005007|ENST00000262803|UPF1;nc|ENSG00000005007|Q92900|UPF1	126.24258497203832	0.0011674249988053026	6				NaN	NaN	0	NaN	4795	2891	7684
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7689	22.908	NaN	10190	30	0	959.69	0.106	+			49375	VVSTVGMQR	9	87	488.7661185024722	975.5176840717444	2	488.7657470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVSTVGMQR_	CON__P35900;ENSG00000171431|ENST00000167588|KRT20	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	4796	2891	7684
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7690	22.91	NaN	26346	30	0	4207.2	0.034				-1	 	0	94	462.2446816552264	922.4748103772528	2	462.2449951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4797	2891	7684
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7691	22.91	NaN	8470.2	30	0	1210.9	0.139	+			33097	RELDGRTL	8	67	480.26638305056247	958.518213167925	2	480.2668762207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RELDGRTL_	ENSG00000112081|ENST00000373715|SRSF3;nc|ENSG00000112081|P84103-2|SRSF3	42.86426827375447	0.638539151166014	6				NaN	NaN	0	NaN	4798	2891	7684
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7709	22.949	NaN	11275	30	0	903.99	0.214	+			3785	ATAFGLGK	8	68	382.7184577356945	763.4223625381891	2	382.71868896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATAFGLGK_	ENSG00000182578|ENST00000675795|CSF1R	63.30626980617807	0.4690498839812213	6				NaN	NaN	0	NaN	4813	2894	7708
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7710	22.953	NaN	29773	30	0	13736	0.106	+			42599	TATATNHVL	9	74	464.247782469557	926.4810120059141	2	464.2480163574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TATATNHVL_	ENSG00000004700|ENST00000444129|RECQL	131.03138772384656	0.014687601201650916	6				NaN	NaN	0	NaN	4814	2894	7708
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7711	22.955	NaN	22689	30	0	2366.3	0.106				-1	 	0	80	500.7739783375965	999.533403741993	2	500.7746276855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4815	2894	7708
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7712	22.957	NaN	10998	30	0	3079.7	0.106	+			24567	LGNAEPLR	8	65	435.245080121161	868.475607309122	2	435.24542236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LGNAEPLR_	ENST00000590891.1_1_16:4659124-4659325:-|nuORF	60.97194046774394	0.49215940876911696	6				NaN	NaN	0	NaN	4816	2894	7708
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7713	22.959	NaN	7713	30	0	1552.1	0.106	+			5400	ATYGDTINR	9	67	505.74784003882166	1009.4811271444433	2	505.74853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATYGDTINR_	ENSG00000071189|ENST00000428135|SNX13;nc|ENSG00000071189|Q9Y5W8|SNX13;SNX13|p.E913Qfs*13|1|0.04|ENSG00000071189|chr7:17794182-17794183|-/TTTG|frameshift_variant;SNX13|p.F895Lfs*9|1|0.23|ENSG00000071189|chr7:17794234-17794234|A/-|frameshift_variant;SNX13|p.F911Wfs*5|1|0.02|ENSG00000071189|chr7:17794184-17794187|AAGA/-|frameshift_variant	90.36981228632155	0.0638227155548745	6				NaN	NaN	0	NaN	4817	2894	7708
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7714	22.96	NaN	22038	30	0	11809	0.036	+			32329	QTTEFGIHK	9	82	530.7748368274403	1059.5351207216804	2	530.7747802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QTTEFGIHK_	ENSG00000156675|ENST00000330843|RAB11FIP1;ENST00000522774.1_1_8:37728794-37730726:-|nuORF;ENST00000523182.5_1_8:37720415-37730726:-|nuORF;nc|ENSG00000156675|Q6WKZ4-1|RAB11FIP1	77.53327743719008	0.1082147015697554	6				NaN	NaN	0	NaN	4818	2894	7708
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7715	22.961	NaN	25705	30	0	12487	0.144	+			1741	AHSAHPERR	9	76	354.1850585220987	1059.5333461664961	3	354.1855773925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AHSAHPERR_	KIAA1755|p.R1067H|1|0.29|ENSG00000149633|chr20:38213445-38213445|C/T|missense_variant	42.86426827375447	0.38666266728046506	6				NaN	NaN	0	NaN	4819	2894	7708
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7733	23.001	NaN	144120	30	0	20930	0.166	+			4883	ATQCGSLIGK	10	86	517.7676485773073	1033.5207442214146	2	517.7687377929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_ATQC(Carbamidomethyl (C))GSLIGK_	ENSG00000169564|ENST00000303577|PCBP1	162.63603312974413	0.006026810256601855	6				NaN	NaN	0	NaN	4834	2897	7732
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7734	23.003	NaN	55444	30	0	18314	0.106	+			45300	TVSADPVVK	9	94	458.2599208219039	914.5052887106078	2	458.2607116699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVSADPVVK_	ENSG00000136051|ENST00000332180|WASHC4	87.69643885390035	0.07135982304947239	6				NaN	NaN	0	NaN	4835	2897	7732
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7735	23.006	NaN	14056	30	0	1879.3	0.106	+			34333	RTPAAVREL	9	86	506.7977289133347	1011.5809048934694	2	506.798583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RTPAAVREL_	ENSG00000136938|ENST00000339399|ANP32B;nc|ENSG00000136938|Q92688-2|ANP32B	29.170058357718403	0.5306379469863586	6				NaN	NaN	0	NaN	4836	2897	7732
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7736	23.007	NaN	16546	30	0	12702	0.106				-1	 	0	48	323.2009205304871	644.3872881277742	2	323.2014465332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4837	2897	7732
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7737	23.009	NaN	23384	30	0	8898.6	0.106				-1	 	0	76	434.2315939822687	866.4486350313374	2	434.23199462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4838	2897	7732
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7738	23.011	NaN	20654	30	0	4083.7	0.106				-1	 	0	85	466.7553605352481	931.4961681372962	2	466.7557373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4839	2897	7732
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7739	23.013	NaN	14048	30	0	3392.9	0.036				-1	 	0	73	351.21290623546906	1050.6168893066072	3	351.2134704589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4840	2897	7732
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7757	23.047	NaN	446440	30	0	54291	0.137	+			50711	YEEVARKL	8	92	504.27888370471453	1006.5432144762291	2	504.2796630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YEEVARKL_	CON__Q3SX28;ENSG00000140416|ENST00000403994|TPM1;ENSG00000143549|ENST00000651641|TPM3;ENSG00000167460|ENST00000643579|TPM4;ENSG00000198467|ENST00000645482|TPM2;ENST00000391998.3_1_19:53982901-53983033:+|nuORF;ENST00000469717.5_1_1:154145382-154155531:-|nuORF;ENST00000471212.5_1_9:35684790-35689844:-|nuORF;ENST00000473036.2_1_1:154145382-154155604:-|nuORF;ENST00000558868.5_1_15:63340774-63353139:+|nuORF;ENST00000560975.5_1_15:63335715-63353895:+|nuORF;ENST00000587201.5_1_19:16187360-16198908:+|nuORF;ENST00000604975.1_1_9:35685264-35689844:-|nuORF;nc|ENSG00000140416|P09493-10|TPM1;nc|ENSG00000140416|P09493-2|TPM1;nc|ENSG00000140416|P09493-3|TPM1;nc|ENSG00000140416|P09493-4|TPM1;nc|ENSG00000140416|P09493-5|TPM1;nc|ENSG00000140416|P09493-6|TPM1;nc|ENSG00000140416|P09493-7|TPM1;nc|ENSG00000140416|P09493-8|TPM1;nc|ENSG00000140416|P09493-9|TPM1;nc|ENSG00000143549|P06753-2|TPM3;nc|ENSG00000143549|P06753-3|TPM3;nc|ENSG00000143549|P06753-4|TPM3;nc|ENSG00000143549|P06753-5|TPM3;nc|ENSG00000143549|P06753-6|TPM3;nc|ENSG00000143549|P06753-7|TPM3;nc|ENSG00000167460|P67936-2|TPM4;nc|ENSG00000198467|P07951-2|TPM2;nc|ENSG00000198467|P07951-3|TPM2;TPM1|p.R160C|1|0.32|ENSG00000140416|chr15:63059666-63059666|C/T|missense_variant	98.62937762414208	0.25143494708580966	6				NaN	NaN	0	NaN	4855	2900	7756
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7758	23.05	NaN	84903	30	0	33885	0.106				-1	 	0	83	390.21146082334747	1167.6125530702425	3	390.2116394042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4856	2900	7756
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7759	23.052	NaN	32958	30	0	17781	0.106				-1	 	0	63	357.21643095451645	1068.6274634637493	3	357.2168273925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4857	2900	7756
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7760	23.054	NaN	49519	30	0	7830.4	0.106	+			11675	FQVLQPQVQ	9	116	362.8690604914505	1085.5853520745516	3	362.86956787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FQVLQPQVQ_	ENSG00000198911|ENST00000361204|SREBF2;nc|ENSG00000198911|Q12772-2|SREBF2	79.45101966838831	0.09992237243120712	6				NaN	NaN	0	NaN	4858	2900	7756
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7761	23.055	NaN	15647	30	0	2626.7	0.106				-1	 	0	86	449.27878383354994	896.5430147338999	2	449.2790222167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4859	2900	7756
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7762	23.057	NaN	21405	30	0	3122.3	0.106	+			12691	GEKGPVKVL	9	76	463.7861985353868	925.5578441375736	2	463.7867431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GEKGPVKVL_	ENSG00000141232|ENST00000499247|TOB1;TOB1|p.F274Yfs*52|1|0.06|ENSG00000141232|chr17:50863197-50863198|-/CATGCAGT|frameshift_variant	69.6276240434122	0.14239879520340665	6				NaN	NaN	0	NaN	4860	2900	7756
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7763	23.059	NaN	7761.8	30	0	2306.5	0.033	+			4282	ATGGSLLSK	9	68	417.2392987340209	832.4640445348418	2	417.23968505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATGGSLLSK_	ENSG00000164542|ENST00000440378|MATCAP2;nc|ENSG00000164542|Q8NCT3-5|MATCAP2	90.60085204095205	0.06317133949006545	6				NaN	NaN	0	NaN	4861	2900	7756
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7781	23.093	NaN	32119	30	0	10606	0.214	+			26695	LVHQVFSEK	9	76	543.7998790336127	1085.5852051340253	2	543.80078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LVHQVFSEK_	ENSG00000170324|ENST00000374201|FRMPD2;FRMPD2|p.K602Sfs*61|1|0.27|ENSG00000170324|chr10:48201377-48201377|T/-|frameshift_variant;FRMPD2|p.N579Tfs*84|1|0.32|ENSG00000170324|chr10:48206809-48206809|T/-|frameshift_variant;nc|ENSG00000170324|Q68DX3-2|FRMPD2	84.9155231211612	0.07920012719736333	6				NaN	NaN	0	NaN	4876	2903	7780
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7782	23.097	NaN	24693	30	0	4034.6	0.106				-1	 	0	82	471.7531592157693	941.4917654983386	2	471.75335693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4877	2903	7780
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7783	23.099	NaN	30466	30	0	16227	0.106				-1	 	0	66	425.72389607582744	849.4332392184549	2	425.7242736816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4878	2903	7780
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7784	23.101	NaN	51636	30	0	5985.9	0.106	+			36310	SESAQSKML	9	87	490.73865027816214	979.4627476231243	2	490.7391662597656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SESAQSKML_	ENSG00000179344|ENST00000434651|HLA-DQB1;ENSG00000196126|ENST00000360004|HLA-DRB1;ENSG00000198502|ENST00000374975|HLA-DRB5;ENSG00000232629|ENST00000437316|HLA-DQB2;ENST00000487676.1_1_6:32628015-32629319:-|nuORF;nc|ENSG00000179344|P01920|HLA-DQB1;nc|ENSG00000232629|P05538|HLA-DQB2	163.1509380574825	0.003936019289634439	6				NaN	NaN	0	NaN	4879	2903	7780
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7785	23.103	NaN	16808	30	0	6026.2	0.106				-1	 	0	69	457.23415093146605	912.4537489297321	2	457.2345275878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4880	2903	7780
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7786	23.105	NaN	38809	30	0	4646.2	0.035	+			13003	GEVDTSLVLS	10	78	510.266134492064	1018.517716050928	2	510.2668151855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GEVDTSLVLS_	ENSG00000005381|ENST00000225275|MPO;ENST00000580005.1_1_17:56357276-56358041:-|nuORF;MPO|p.R302Afs*132|1|0.16|ENSG00000005381|chr17:58278127-58278127|G/-|frameshift_variant;nc|ENSG00000005381|P05164-3|MPO	58.78195531508484	0.37691818691852547	6				NaN	NaN	0	NaN	4881	2903	7780
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7787	23.105	NaN	26022	30	0	2661.4	0.14			+	30478	QAEPGWSPQ	9	85	500.2287922457571	998.4430315583143	2	500.73785400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QAEPGWSPQ_	REV__ENSG00000133619|ENST00000496259|KRBA1;REV__KRBA1|p.I622Sfs*4|1|0.09|ENSG00000133619|chr7:149730195-149730195|G/-|frameshift_variant;REV__nc|ENSG00000133619|A5PL33-2|KRBA1;REV__nc|ENSG00000133619|A5PL33-3|KRBA1;REV__nc|ENSG00000133619|A5PL33|KRBA1	56.43379154798735	0.2433427591689151	6				NaN	NaN	0	NaN	4882	2903	7780
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7805	23.144	NaN	76891	30	0	11468	0.201	+			28774	NPEHASVAM	9	86	478.21788658394615	954.4212202346923	2	478.2184143066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NPEHASVAM_	ENSG00000102317|ENST00000376759|RBM3;ENST00000466764.5_1_X:48433568-48434262:+|nuORF;ENST00000488216.5_1_X:48433568-48434199:+|nuORF;ENST00000491240.5_1_X:48433911-48434199:+|nuORF	104.74654710444128	0.034358562718640136	6				NaN	NaN	0	NaN	4897	2906	7804
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7806	23.147	NaN	21895	30	0	3511.3	0.106				-1	 	0	82	448.24722254994293	894.4798921666859	2	448.24755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4898	2906	7804
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7807	23.149	NaN	14242	30	0	3507.5	0.106	+			3316	ASLTDTVNK	9	88	474.75291128455126	947.4912696359025	2	474.7532043457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASLTDTVNK_	ENSG00000163946|ENST00000683822|TASOR;nc|ENSG00000163946|Q9UK61-2|TASOR;nc|ENSG00000163946|Q9UK61-3|TASOR;nc|ENSG00000163946|Q9UK61-4|TASOR	134.7655990226056	0.012935733000282069	6				NaN	NaN	0	NaN	4899	2906	7804
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7808	23.151	NaN	13766	30	0	2038.6	0.106	+			8149	EAAGEVRAM	9	81	467.22556569488114	932.4365784565623	2	467.22625732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EAAGEVRAM_	ENST00000256015.4_1_12:92539535-92539610:-|nuORF	84.9155231211612	0.07920012719736333	6				NaN	NaN	0	NaN	4900	2906	7804
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7809	23.153	NaN	17032	30	0	4269.9	0.106	+			36017	SEIERQAQV	9	85	530.2754661622082	NaN	0	530.2755737304688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SEIERQAQV_	ENSG00000149182|ENST00000524782|ARFGAP2;ENST00000395449.7_1_11:47187835-47198404:-|nuORF;nc|ENSG00000149182|Q8N6H7-2|ARFGAP2	117.81106730687013	0.0026430897281881707	6				NaN	NaN	0	NaN	4901	2906	7804
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7810	23.155	NaN	14891	30	0	1147.6	0.106			+	32559	QVVGVRVKD	9	83	500.30018060006455	998.5858082669291	2	500.30084228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QVVGVRVKD_	REV__ENSG00000172752|ENST00000373157|COL6A5;REV__nc|ENSG00000172752|A8TX70-2|COL6A5;REV__nc|ENSG00000172752|A8TX70|COL6A5	32.81241826257853	0.4965981579233955	6				NaN	NaN	0	NaN	4902	2906	7804
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7811	23.156	NaN	7447.3	30	0	1881.5	0.032			+	12122	GAGCGLLEV	9	63	409.70705731898954	817.3995617047791	2	409.7073059082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GAGCGLLEV_	REV__ENSG00000159753|ENST00000334583|CARMIL2;REV__ENST00000602321.5_1_16:67685038-67685320:+|nuORF;REV__ENST00000602633.1_1_16:67683966-67685573:+|nuORF;REV__nc|ENSG00000159753|Q6F5E8-2|CARMIL2	50.0245360154114	0.3026755932229825	6				NaN	NaN	0	NaN	4903	2906	7804
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7829	23.194	NaN	10688	30	0	1567.2	0.214	+			349	AAQDSTDLVAK	11	79	559.7876600295114	1117.5607671258226	2	559.788330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAQDSTDLVAK_	ENSG00000120438|ENST00000321394|TCP1;ENST00000546204.1_1_6:160200657-160201127:-|nuORF	73.90049950687481	0.20322248490973555	6				NaN	NaN	0	NaN	4918	2909	7828
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7830	23.198	NaN	14572	30	0	2542.3	0.106	+			48732	VTVDGHLIRK	10	74	379.8956048934655	1136.6649852805965	3	379.8962097167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTVDGHLIRK_	ENSG00000107521|ENST00000361490|HPS1;ENST00000467246.5_1_10:100191016-100205113:-|nuORF;ENST00000474873.5_1_10:100195027-100205113:-|nuORF;nc|ENSG00000289758|Q92902-2|HPS1;nc|ENSG00000289758|Q92902-3|HPS1	32.75053402867276	0.6123771875927935	6				NaN	NaN	0	NaN	4919	2909	7828
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7831	23.2	NaN	23915	30	0	4005.5	0.106	+			35484	SATGRELWS	9	81	503.75205960365764	1005.4895662741153	2	503.7529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SATGRELWS_	ENSG00000081148|ENST00000193391|IMPG2;IMPG2|p.F1232Lfs*2|1|0.3|ENSG00000081148|chr3:101228814-101228814|A/-|frameshift_variant	58.78195531508484	0.22376836668196862	6				NaN	NaN	0	NaN	4920	2909	7828
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7832	23.202	NaN	7969.8	30	0	1014.7	0.106	+			32164	QSQREFTLK	9	79	568.8058133381982	1135.5970737431962	2	568.8068237304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QSQREFTLK_	ENST00000438163.1_1_2:32427889-32428366:+|nuORF	115.49404669440601	0.023927554121326553	6				NaN	NaN	0	NaN	4921	2909	7828
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7833	23.203	NaN	8680.4	30	0	2785.3	0.106	+			4375	ATGTSILK	8	65	395.73694847315426	789.4593440131085	2	395.7370300292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATGTSILK_	ENSG00000157637|ENST00000374759|SLC38A10	79.45101966838831	0.3281480470254892	6				NaN	NaN	0	NaN	4922	2909	7828
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7834	23.205	NaN	4934	30	0	498.17	0.035	+			20410	KETKEKVE	8	70	495.77614803064273	989.5377431280855	2	495.7764892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KETKEKVE_	tr|U7SW21|U7SW21_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01424PE=4SV=1	45.97224482568171	0.6192535143389125	6				NaN	NaN	0	NaN	4923	2909	7828
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7835	23.206	NaN	7265.9	30	0	766.37	0.139			+	12890	GESATSIPVV	10	70	480.2550877211334	958.4956225090668	2	480.255615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GESATSIPVV_	REV__ENSG00000169876|ENST00000306151|MUC17;REV__ENSG00000169876|ENST00000306151|MUC17;REV__MUC17|p.N4205Tfs*18|1|0.07|ENSG00000169876|chr7:101048918-101048918|A/-|frameshift_variant;REV__MUC17|p.N4205Tfs*18|1|0.07|ENSG00000169876|chr7:101048918-101048918|A/-|frameshift_variant;REV__MUC17|p.S3486Qfs*18|1|0.41|ENSG00000169876|chr7:101041869-101041870|-/C|frameshift_variant;REV__MUC17|p.S3486Qfs*18|1|0.41|ENSG00000169876|chr7:101041869-101041870|-/C|frameshift_variant;REV__nc|ENSG00000169876|Q685J3-2|MUC17;REV__nc|ENSG00000169876|Q685J3-2|MUC17	53.351449002276354	0.42630798468005626	6				NaN	NaN	0	NaN	4924	2909	7828
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7854	23.245	NaN	249850	30	0	51988	0.128	+			43215	TEVKKIYKL	9	113	374.5688293706254	1120.6846587120763	3	374.5692138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEVKKIYKL_	ENSG00000144034|ENST00000272424|TPRKB;nc|ENSG00000144034|Q9Y3C4-2|TPRKB;nc|ENSG00000144034|Q9Y3C4-3|TPRKB	98.58198989935565	0.04066992115528678	6				NaN	NaN	0	NaN	4940	2912	7853
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7855	23.247	NaN	97666	30	0	18643	0.085	+			17654	IEKFDKSKL	9	88	554.3236464823299	1106.6327400314597	2	554.3245849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IEKFDKSKL_	ENSG00000154620|ENST00000284856|TMSB4Y;ENSG00000205542|ENST00000451311|TMSB4X;ENST00000323496.5_1_9:131104444-131104642:+|nuORF;TMSB4X|p.A8V|1|0.09|ENSG00000205542|chrX:12976284-12976284|C/T|missense_variant	147.30332882356183	0.0074976797444588125	6				NaN	NaN	0	NaN	4941	2912	7853
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7856	23.249	NaN	47617	30	0	6196.3	0.106	+			12524	GEFEKKYVA	9	81	535.7790660270679	1069.5435791209356	2	535.7800903320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEFEKKYVA_	ENSG00000132341|ENST00000543796|RAN	122.1759843771914	0.019882474861609503	6				NaN	NaN	0	NaN	4942	2912	7853
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7857	23.251	NaN	8394.2	30	0	2036.9	0.106	+			22432	KTLDAEVVEK	10	73	566.3161241401679	1130.6176953471356	2	566.3171997070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTLDAEVVEK_	ENSG00000185049|ENST00000382882|NELFA;ENST00000463820.5_1_4:1985048-1993691:-|nuORF;ENST00000467661.5_1_4:1985048-1988196:-|nuORF;nc|ENSG00000185049|Q9H3P2-7|NELFA;NELFA|p.P411Rfs*67|1|0.23|ENSG00000185049|chr4:1983918-1983918|G/-|frameshift_variant	126.02560380233024	0.01881945862950052	6				NaN	NaN	0	NaN	4943	2912	7853
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7858	23.252	NaN	17654	30	0	4263.2	0.106	+			39175	SSYLQIHQK	9	77	368.53249775833063	NaN	0	368.53314208984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSYLQIHQK_	ENSG00000167380|ENST00000337433|ZNF226;ENST00000588883.5_1_19:44679604-44681824:+|nuORF	42.86426827375447	0.2558691296974908	6				NaN	NaN	0	NaN	4944	2912	7853
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7859	23.254	NaN	13666	30	0	1952.8	0.106	+			12563	GEGKPTPAL	9	90	435.2394566421266	868.4643603510532	2	435.2398681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GEGKPTPAL_	ENSG00000132305|ENST00000410111|IMMT;ENST00000409258.2_1_2:86386442-86398424:-|nuORF;ENST00000474969.5_1_2:86385703-86422514:-|nuORF;nc|ENSG00000132305|Q16891-2|IMMT;nc|ENSG00000132305|Q16891-3|IMMT;nc|ENSG00000132305|Q16891-4|IMMT	95.81516180277367	0.04847050768394289	6				NaN	NaN	0	NaN	4945	2912	7853
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7860	23.256	NaN	8272	30	0	1661	0.037			+	10419	EVIDGPVIDK	10	71	362.2009630518212	1083.5810597556635	3	362.2015380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EVIDGPVIDK_	REV__ATP2A2|p.I1027Cfs*4|1|0.37|ENSG00000174437|chr12:110346394-110346395|-/TGTGCTGCTCATAATGCCCCTGG|frameshift_variant;REV__ATP2A2|p.N330Mfs*55|1|0.41|ENSG00000174437|chr12:110327907-110327907|A/-|frameshift_variant;REV__ENSG00000174437|ENST00000539276|ATP2A2;REV__nc|ENSG00000174437|P16615-2|ATP2A2;REV__nc|ENSG00000174437|P16615-3|ATP2A2;REV__nc|ENSG00000174437|P16615-4|ATP2A2;REV__nc|ENSG00000174437|P16615-5|ATP2A2	30.568863376406313	0.6301935916953115	6				NaN	NaN	0	NaN	4946	2912	7853
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7861	23.257	NaN	10708	30	0	2876.8	0.14				-1	 	0	71	335.5371915020262	1003.5897451062785	3	335.53778076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4947	2912	7853
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7879	23.295	NaN	135990	30	0	49026	0.212				-1	 	0	84	458.7760687311106	915.5375845290213	2	458.77642822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4962	2915	7878
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7880	23.298	NaN	8494.2	30	0	550.52	0.106	+			7845	DQQLRSLQ	8	73	494.2644979619827	986.5144429907655	2	494.26483154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DQQLRSLQ_	CNTRL|p.K1802Sfs*9|2|0.21|ENSG00000119397|chr9:121162247-121162247|A/-|frameshift_variant;ENSG00000119397|ENST00000373855|CNTRL;nc|ENSG00000119397|Q7Z7A1-2|CNTRL;nc|ENSG00000119397|Q7Z7A1-3|CNTRL;nc|ENSG00000119397|Q7Z7A1-5|CNTRL	54.776311868738084	0.5534952410049249	6				NaN	NaN	0	NaN	4963	2915	7878
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7881	23.3	NaN	16752	30	0	2130.8	0.106	+			44095	TPTRASPQL	9	65	485.7684748744129	969.5223968156258	2	485.7687072753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TPTRASPQL_	COL6A3|p.A2956Lfs*45|1|0.33|ENSG00000163359|chr2:237336234-237336234|C/-|frameshift_variant;COL6A3|p.A2957Lfs*44|1|0.33|ENSG00000163359|chr2:237336232-237336232|A/-|frameshift_variant;COL6A3|p.G3016Vfs*19|1|0.34|ENSG00000163359|chr2:237334810-237334810|G/-|frameshift_variant;ENSG00000163359|ENST00000295550|COL6A3;ENST00000491769.1_1_2:238252944-238263658:-|nuORF;nc|ENSG00000163359|P12111-2|COL6A3;nc|ENSG00000163359|P12111-4|COL6A3	82.7504851949679	0.08565546331141553	6				NaN	NaN	0	NaN	4964	2915	7878
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7882	23.302	NaN	8657.6	30	0	863.29	0.106	+			40152	STQNGPVFAK	10	77	524.7766957159732	NaN	0	524.7752685546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STQNGPVFAK_	ENSG00000099942|ENST00000354336|CRKL	112.10723106719422	0.014941759800839057	6				NaN	NaN	0	NaN	4965	2915	7878
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7883	23.304	NaN	15608	30	0	2230.2	0.106	+			50677	YEEEVKKTL	9	93	569.8026356801994	1137.5907184271987	2	569.8034057617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YEEEVKKTL_	ECHDC1|p.N109Ifs*9|1|0.19|ENSG00000093144|chr6:127327057-127327057|T/-|frameshift_variant;ECHDC1|p.N222Mfs*3|1|0.46|ENSG00000093144|chr6:127290128-127290128|T/-|frameshift_variant;ENSG00000093144|ENST00000454859|ECHDC1;ENST00000368287.1_1_6:127648134-127664493:-|nuORF;nc|ENSG00000093144|Q9NTX5-5|ECHDC1;nc|ENSG00000093144|Q9NTX5-6|ECHDC1;nc|ENSG00000093144|Q9NTX5|ECHDC1	117.5257442709337	0.022697614825424036	6				NaN	NaN	0	NaN	4966	2915	7878
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7884	23.306	NaN	2447.5	30	0	1043.1	0.035			+	-1	ALPCPHPLS	9	40	331.1719823053684	990.4941175163051	3	331.1724548339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_ALPC(Carbamidomethyl (C))PHPLS_	REV__ENST00000485069.1_1_2:220336438-220336879:+|nuORF	27.882242232435846	0.5426732730940306	6				NaN	NaN	0	NaN	4967	2915	7878
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7885	23.306	NaN	7424.3	30	0	1490.8	0.142			+	-1	MDMSLMKRL	9	64	386.18873961440505	1155.5443894434152	3	386.18896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Oxidation (M)	_M(Oxidation (M))DM(Oxidation (M))SLMKRL_	REV__ENSG00000154864|ENST00000674853|PIEZO2;REV__PIEZO2|p.E2492Kfs*3|1|0.27|ENSG00000154864|chr18:10680339-10680339|T/-|frameshift_variant;REV__PIEZO2|p.L2716Ffs*33|1|0.12|ENSG00000154864|chr18:10671638-10671639|-/A|frameshift_variant;REV__PIEZO2|p.Y2489Sfs*7|1|0.06|ENSG00000154864|chr18:10680346-10680347|-/GG|frameshift_variant	35.61828744233558	0.47037581924408073	6				NaN	NaN	0	NaN	4968	2915	7878
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7903	23.346	NaN	92100	30	0	16681	0.208				-1	 	0	108	526.7772771097608	1051.5400012863215	2	526.7781982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4983	2918	7902
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7904	23.349	NaN	21682	30	0	2824	0.106	+			40806	SVDVHQVYK	9	90	537.7820952094582	1073.5496374857164	2	537.783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVDVHQVYK_	ENSG00000186314|ENST00000683046|PRELID2;ENST00000394450.6_1_5:145205751-145214847:-|nuORF;ENST00000515475.1_1_5:145199495-145214847:-|nuORF;nc|ENSG00000186314|Q8N945|PRELID2;PRELID2|p.N28Tfs*10|1|0.28|ENSG00000186314|chr5:145823129-145823129|G/-|frameshift_variant	95.81516180277367	0.04847050768394289	6				NaN	NaN	0	NaN	4984	2918	7902
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7905	23.351	NaN	12272	30	0	3619.8	0.106	+			51476	YVHDDGRVSY	10	79	605.7771390026679	1209.5397250721358	2	605.7781982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YVHDDGRVSY_	ENSG00000130755|ENST00000597595|GMFG;ENST00000601731.1_1_19:39819119-39826633:-|nuORF	160.8219353732433	0.006574023344242491	6				NaN	NaN	0	NaN	4985	2918	7902
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7906	23.353	NaN	35863	30	0	10046	0.106	+			44866	TTVDIFHKK	9	90	363.54097007724073	1087.6010808319222	3	363.54144287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TTVDIFHKK_	ENSG00000158411|ENST00000289359|MITD1	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	4986	2918	7902
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7907	23.355	NaN	12570	30	0	2284.4	0.106	+			33454	RINVPMVRK	9	69	371.560991805809	1111.661146017627	3	371.5622863769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RINVPMVRK_	DLC1|p.Q1096Sfs*33|1|0.29|ENSG00000164741|chr8:13095127-13095127|G/-|frameshift_variant;DLC1|p.S830Rfs*7|1|0.33|ENSG00000164741|chr8:13099850-13099850|G/-|frameshift_variant;ENSG00000164741|ENST00000276297|DLC1;nc|ENSG00000164741|Q96QB1-1|DLC1;nc|ENSG00000164741|Q96QB1-4|DLC1;nc|ENSG00000164741|Q96QB1-6|DLC1	60.11826168202944	0.21262886028301267	6				NaN	NaN	0	NaN	4987	2918	7902
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7908	23.357	NaN	184820	30	0	78143	0.037				-1	VAPGSVQCLAV	11	115	367.5299443775344	1099.5680037328032	3	367.5305480957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_VAPGSVQC(Carbamidomethyl (C))LAV_	ENSG00000198752|ENST00000361246|CDC42BPB	45.02220120713402	0.4892240028381124	6				NaN	NaN	0	NaN	4988	2918	7902
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7909	23.357	NaN	10498	30	0	2002.8	0.138				-1	 	0	68	449.26051290074355	896.5064728682871	2	449.2611389160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4989	2918	7902
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7927	23.395	NaN	87549	30	0	15964	0.214				-1	 	0	104	481.7660654294717	961.5175779257435	2	481.76654052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5004	2921	7926
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7928	23.398	NaN	36318	30	0	14838	0.106				-1	 	0	105	361.52642673730253	1081.5574508121076	3	361.5269470214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5005	2921	7926
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7929	23.4	NaN	30440	30	0	17201	0.106				-1	 	0	60	427.2474485449841	852.4803441567682	2	427.2479553222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5006	2921	7926
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7930	23.402	NaN	41651	30	0	31351	0.106	+			32633	QYTHKIYHL	9	67	401.5482800733439	1201.6230108202317	3	401.5486755371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QYTHKIYHL_	ENSG00000174238|ENST00000313486|PITPNA;ENSG00000180957|ENST00000335272|PITPNB;ENST00000460566.5_1_22:28293057-28315179:-|nuORF;ENST00000471825.1_1_22:28306950-28315179:-|nuORF;nc|ENSG00000180957|P48739-2|PITPNB;nc|ENSG00000180957|P48739-3|PITPNB	44.377184641726394	0.36891676396732553	6				NaN	NaN	0	NaN	5007	2921	7926
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7931	23.404	NaN	10007	30	0	2489.7	0.106	+			49360	VVSSTVTQL	9	61	467.26546052494103	932.5163681166821	2	467.2660217285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVSSTVTQL_	ENSG00000132470|ENST00000200181|ITGB4;ITGB4|p.A1304Pfs*140|1|0.27|ENSG00000132470|chr17:75752287-75752287|G/-|frameshift_variant;ITGB4|p.T1720Rfs*13|1|0.05|ENSG00000132470|chr17:75757046-75757052|GACCACT/-|frameshift_variant;nc|ENSG00000132470|P16144-2|ITGB4;nc|ENSG00000132470|P16144-3|ITGB4;nc|ENSG00000132470|P16144-4|ITGB4	54.776311868738084	0.25715957988447635	6				NaN	NaN	0	NaN	5008	2921	7926
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7932	23.406	NaN	55645	30	0	5850	0.035				-1	 	0	90	508.2373633385185	1014.460173743837	2	508.2381896972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5009	2921	7926
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7933	23.406	NaN	3655.2	30	0	460.73	0.142	+			32928	REAEGQLQKL	10	72	586.3246433139927	1170.6347336947854	2	586.3255004882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_REAEGQLQKL_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	79.48907831485694	0.19979514868675113	6				NaN	NaN	0	NaN	5010	2921	7926
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7951	23.444	NaN	215000	30	0	115760	0.214	+			17399	IAPTGHSL	8	77	398.22124192363634	794.4279309140727	2	398.2214660644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IAPTGHSL_	ENSG00000125354|ENST00000394610|SEPTIN6;ENSG00000138758|ENST00000264893|SEPTIN11;nc|ENSG00000125354|Q14141-3|SEPTIN6;nc|ENSG00000125354|Q14141-4|SEPTIN6;nc|ENSG00000125354|Q14141|SEPTIN6;nc|ENSG00000138758|Q9NVA2-2|SEPTIN11	76.84663266511073	0.3498490246073164	6				NaN	NaN	0	NaN	5025	2924	7950
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7952	23.448	NaN	76393	30	0	52704	0.106	+			324	AAPSAAREL	9	70	443.2424998155272	884.4704466978544	2	443.2427978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAPSAAREL_	ENSG00000107960|ENST00000224950|STN1	109.47833844074708	0.029530294723441826	6				NaN	NaN	0	NaN	5026	2924	7950
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7953	23.45	NaN	46075	30	0	18536	0.106	+			45460	TYAEKLHRL	9	92	377.54708155057625	1129.6194152519288	3	377.5487060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TYAEKLHRL_	DST|p.K5076Nfs*24|1|0.31|ENSG00000151914|chr6:56472218-56472218|T/-|frameshift_variant;DST|p.L1539Ffs*11|1|0.39|ENSG00000151914|chr6:56611525-56611526|-/A|frameshift_variant;DST|p.N1220Tfs*9|1|0.23|ENSG00000151914|chr6:56630354-56630354|T/-|frameshift_variant;DST|p.T4428Nfs*23|1|0.12|ENSG00000151914|chr6:56497896-56497897|-/T|frameshift_variant;ENSG00000151914|ENST00000680361|DST;ENST00000521104.1_1_6:56504020-56557947:-|nuORF;ENST00000523967.5_1_6:56504020-56716372:-|nuORF;nc|ENSG00000151914|Q03001-13|DST;nc|ENSG00000151914|Q03001-14|DST;nc|ENSG00000151914|Q03001-3|DST;nc|ENSG00000151914|Q03001-8|DST;nc|ENSG00000151914|Q03001-9|DST;nc|ENSG00000151914|Q03001|DST	56.43379154798735	0.2433427591689151	6				NaN	NaN	0	NaN	5027	2924	7950
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7954	23.452	NaN	13918	30	0	2661	0.106	+			26811	LVSPEQPPK	9	74	497.78136672085253	993.5481805085051	2	497.78192138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LVSPEQPPK_	ENSG00000079819|ENST00000337057|EPB41L2;nc|ENSG00000079819|O43491-2|EPB41L2;nc|ENSG00000079819|O43491-3|EPB41L2;nc|ENSG00000079819|O43491-4|EPB41L2	76.16968421966216	0.11411088698345859	6				NaN	NaN	0	NaN	5028	2924	7950
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7955	23.454	NaN	12110	30	0	2000.3	0.106	+			40235	STSFISSSK	9	74	472.23942474245996	942.4642965517199	2	472.2397766113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STSFISSSK_	ENSG00000159459|ENST00000290650|UBR1;nc|ENSG00000159459|Q8IWV7-2|UBR1;UBR1|p.P1614Hfs*32|1|0.22|ENSG00000159459|chr15:42952443-42952443|G/-|frameshift_variant	104.0567914643314	0.03506238181059741	6				NaN	NaN	0	NaN	5029	2924	7950
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7956	23.455	NaN	6160.7	30	0	531.07	0.036	+			42834	TEDSKRIAVV	10	83	559.3134239317598	1116.6122949303194	2	559.314697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TEDSKRIAVV_	ENSG00000071127|ENST00000499869|WDR1	80.45461616416974	0.1919067876629769	6				NaN	NaN	0	NaN	5030	2924	7950
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7957	23.456	NaN	7117.5	30	0	3593.4	0.143	+			25132	LLRCGQRLDE	10	69	601.818514487892	1201.622476042584	2	601.8197021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LLRCGQRLDE_	ENSG00000071909|ENST00000408978|MYO3B;ENST00000409940.6_1_2:171034716-171376051:+|nuORF;ENST00000438642.6_1_2:171034716-171400468:+|nuORF;ENST00000602629.1_1_2:171055868-171092621:+|nuORF;MYO3B|p.G1143Efs*93|1|0.19|ENSG00000071909|chr2:170514975-170514975|G/-|frameshift_variant;MYO3B|p.K1243Sfs*25|1|0.21|ENSG00000071909|chr2:170543980-170543980|A/-|frameshift_variant;MYO3B|p.S1144Kfs*12|1|0.37|ENSG00000071909|chr2:170514974-170514975|-/G|frameshift_variant;nc|ENSG00000071909|Q8WXR4-2|MYO3B;nc|ENSG00000071909|Q8WXR4-3|MYO3B;nc|ENSG00000071909|Q8WXR4-4|MYO3B;nc|ENSG00000071909|Q8WXR4-5|MYO3B;nc|ENSG00000071909|Q8WXR4-6|MYO3B;nc|ENSG00000071909|Q8WXR4-7|MYO3B	38.753607047826485	0.5606299674732264	6				NaN	NaN	0	NaN	5031	2924	7950
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7975	23.494	NaN	100860	30	0	18054	0.205				-1	 	0	97	439.25261565615733	876.4906783791147	2	439.2528381347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5046	2927	7974
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7976	23.498	NaN	146090	30	0	29256	0.106	+			14610	GTGDVKLLK	9	121	465.7842384307115	NaN	0	465.78424072265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTGDVKLLK_	ENSG00000099901|ENST00000430524|RANBP1;ENST00000435265.5_1_22:20106640-20110140:+|nuORF;ENST00000488484.1_1_22:20105172-20110015:+|nuORF;nc|ENSG00000099901|P43487-2|RANBP1;nc|ENSG00000099901|P43487|RANBP1	114.8945686534367	0.005276929498059453	6				NaN	NaN	0	NaN	5047	2927	7974
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7977	23.5	NaN	49646	30	0	31713	0.106			+	20949	KKDHAKFKE	9	93	377.54708155057625	1129.6194152519288	3	377.88079833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KKDHAKFKE_	REV__ENSG00000112851|ENST00000284037|ERBIN;REV__nc|ENSG00000112851|Q96RT1-2|ERBIN;REV__nc|ENSG00000112851|Q96RT1-3|ERBIN;REV__nc|ENSG00000112851|Q96RT1-4|ERBIN;REV__nc|ENSG00000112851|Q96RT1-5|ERBIN;REV__nc|ENSG00000112851|Q96RT1-6|ERBIN;REV__nc|ENSG00000112851|Q96RT1-7|ERBIN;REV__nc|ENSG00000112851|Q96RT1-8|ERBIN;REV__nc|ENSG00000112851|Q96RT1-9|ERBIN	41.42661286455405	0.403525789677298	6				NaN	NaN	0	NaN	5048	2927	7974
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7978	23.502	NaN	19540	30	0	1848.5	0.106	+			42424	TAKSVTCTY	9	88	487.2358115474278	972.4570701616556	2	487.2361755371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TAKSVTCTY_	ENSG00000141510|ENST00000269305|TP53;ENST00000505014.5_1_17:7578140-7579834:-|nuORF;nc|ENSG00000141510|P04637-2|TP53;nc|ENSG00000141510|P04637-3|TP53;nc|ENSG00000141510|P04637-4|TP53;nc|ENSG00000141510|P04637-5|TP53;nc|ENSG00000141510|P04637-6|TP53;TP53|p.C229Yfs*10|1|0.59|ENSG00000141510|chr17:7674276-7674277|AC/-|frameshift_variant;TP53|p.C242Afs*5|1|0.54|ENSG00000141510|chr17:7674240-7674240|G/-|frameshift_variant;TP53|p.E198Gfs*11|1|0.43|ENSG00000141510|chr17:7674938-7674939|-/C|frameshift_variant;TP53|p.E336Sfs*9|1|0.15|ENSG00000141510|chr17:7670704-7670704|A/-|frameshift_variant;TP53|p.G302Rfs*4|1|0.13|ENSG00000141510|chr17:7673717-7673718|-/G|frameshift_variant;TP53|p.H178Tfs*69|1|0.68|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant;TP53|p.I195Nfs*14|1|0.81|ENSG00000141510|chr17:7674947-7674948|-/T|frameshift_variant;TP53|p.P151Rfs*27|1|0.46|ENSG00000141510|chr17:7675153-7675160|GGGCGGGG/-|frameshift_variant;TP53|p.P153Afs*28|1|0.62|ENSG00000141510|chr17:7675156-7675157|-/G|frameshift_variant;TP53|p.P301Qfs*44|1|0.5|ENSG00000141510|chr17:7673718-7673718|G/-|frameshift_variant;TP53|p.P322Hfs*23|1|0.53|ENSG00000141510|chr17:7673563-7673563|G/-|frameshift_variant;TP53|p.Q331Sfs*6|1|0.66|ENSG00000141510|chr17:7673537-7673538|-/A|frameshift_variant;TP53|p.R280Kfs*59|1|0.41|ENSG00000141510|chr17:7673763-7673781|TCCTCTGTGCGCCGGTCTC/-|frameshift_variant;TP53|p.R290Kfs*53|1|0.62|ENSG00000141510|chr17:7673747-7673753|CTTGCGG/-|frameshift_variant;TP53|p.R335Lfs*10|1|0.74|ENSG00000141510|chr17:7670705-7670705|C/-|frameshift_variant;TP53|p.S127F|1|0.75|ENSG00000141510|chr17:7675232-7675232|G/A|missense_variant;TP53|p.S127T|1|0.68|ENSG00000141510|chr17:7675233-7675233|A/T|missense_variant	90.60085204095205	0.06317133949006545	6				NaN	NaN	0	NaN	5049	2927	7974
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7979	23.503	NaN	8676.8	30	0	721.82	0.106				-1	 	0	70	480.7892200805433	959.5638872278867	2	480.7896728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5050	2927	7974
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7980	23.505	NaN	36889	30	0	12445	0.038	+			23199	KYADLSHNRL	10	81	406.2204585363768	1215.6395462093303	3	406.5564880371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KYADLSHNRL_	ENSG00000113643|ENST00000231572|RARS1;nc|ENSG00000113643|P54136-2|RARS1	63.69406221917213	0.3322431690470481	6				NaN	NaN	0	NaN	5051	2927	7974
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7981	23.506	NaN	16866	30	0	7410.8	0.145	+			22491	KTNNFETDLLF	11	74	447.8945157340147	1340.661717802244	3	447.8948974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KTNNFETDLLF_	tr|U7SU24|U7SU24_FUSNUAlanine--tRNAligaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=alaSPE=3SV=1	29.550750289552195	0.6798279264880025	6				NaN	NaN	0	NaN	5052	2927	7974
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7999	23.546	NaN	50279	30	0	7695.8	0.214	+			3678	ASYTKIVVK	9	104	504.8069674763641	NaN	0	504.807861328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASYTKIVVK_	ENSG00000141252|ENST00000437048|VPS53;ENST00000541903.6_1_17:422370-426182:-|nuORF	171.33049012695201	0.009791030131186075	6				NaN	NaN	0	NaN	5067	2930	7998
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8000	23.55	NaN	44744	30	0	7894.3	0.106				-1	LSRLMAMVDVL	11	67	427.2293889771778	1278.6663375317335	3	427.22991943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Oxidation (M)	_LSRLM(Oxidation (M))AM(Oxidation (M))VDVL_	ENSG00000172915|ENST00000379939|NBEA;NBEA|p.V2250Lfs*10|1|0.36|ENSG00000172915|chr13:35550967-35550967|A/-|frameshift_variant;nc|ENSG00000172915|Q8NFP9|NBEA	32.75053402867276	0.6462648045997152	6				NaN	NaN	0	NaN	5068	2930	7998
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8001	23.552	NaN	52103	30	0	12150	0.106			+	11643	FQHHRRAQLS	10	90	640.3418254652081	1278.669097997216	2	640.3414306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FQHHRRAQLS_	REV__ENSG00000102901|ENST00000562787|CENPT;REV__ENST00000436104.6_1_16:67862410-67864187:-|nuORF;REV__ENST00000562513.6_1_16:67862078-67865741:-|nuORF;REV__ENST00000568495.5_1_16:67862172-67864127:-|nuORF;REV__ENST00000569862.5_1_16:67862172-67864187:-|nuORF	64.20726635412375	0.3275756395432415	6				NaN	NaN	0	NaN	5069	2930	7998
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8002	23.554	NaN	38183	30	0	6851.7	0.106			+	1048	AEKQAVQL	8	89	443.7525921455101	885.4906313578202	2	443.7530822753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEKQAVQL_	REV__ENSG00000116852|ENST00000461742|KIF21B;REV__nc|ENSG00000116852|O75037-2|KIF21B;REV__nc|ENSG00000116852|O75037-3|KIF21B;REV__nc|ENSG00000116852|O75037|KIF21B	60.97194046774394	0.49215940876911696	6				NaN	NaN	0	NaN	5070	2930	7998
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8003	23.556	NaN	29546	30	0	7966.4	0.106			+	-1	WCVKPFKA	8	96	518.2764076671225	1034.538262401045	2	518.2774047851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_WC(Carbamidomethyl (C))VKPFKA_	REV__ENST00000278612.8_1_11:108058836-108062880:-|nuORF	40.5726180659479	0.6527593143185008	6				NaN	NaN	0	NaN	5071	2930	7998
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8004	23.557	NaN	14499	30	0	1781.5	0.035	+			22128	KSPEIQRAL	9	74	521.3052993242059	1040.5960457152116	2	521.306396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KSPEIQRAL_	ENSG00000174444|ENST00000307961|RPL4;ENST00000422486.1_1_3:185135660-185136437:-|nuORF;ENST00000567229.5_1_15:66791747-66793486:-|nuORF	90.36981228632155	0.0638227155548745	6				NaN	NaN	0	NaN	5072	2930	7998
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8022	23.595	NaN	85696	30	0	8152.7	0.214	+			40765	SVDKLVIQK	9	109	515.3180869768065	1028.621621020413	2	515.3189697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVDKLVIQK_	ENST00000523612.1_1_8:142469282-142469963:+|nuORF	143.37361013837676	0.008897369944672323	6				NaN	NaN	0	NaN	5087	2933	8021
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8023	23.599	NaN	40074	30	0	11269	0.106			+	27305	MGSSFSSVGA	10	93	465.20465871701816	928.3947645008363	2	465.2050476074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MGSSFSSVGA_	REV__nc|ENSG00000187905|Q6ZQY2-2|LRRC74B	56.72105179125745	0.3956618550748046	6				NaN	NaN	0	NaN	5088	2933	8021
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8024	23.601	NaN	14710	30	0	3369.4	0.106			+	20879	KIPGWTQW	8	81	508.2730052898143	1014.5314576464286	2	508.27459716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KIPGWTQW_	REV__MKS1|p.P200Lfs*29|1|0.09|ENSG00000011143|chr17:58214304-58214304|G/-|frameshift_variant	53.351449002276354	0.5676011784961348	6				NaN	NaN	0	NaN	5089	2933	8021
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8025	23.603	NaN	11596	30	0	2626.1	0.106	+			26436	LTGPPGVGK	9	71	413.24463592760145	824.4747189220029	2	413.24493408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LTGPPGVGK_	ENSG00000135778|ENST00000366628|NTPCR	68.78682469695295	0.14603441672067394	6				NaN	NaN	0	NaN	5090	2933	8021
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8026	23.604	NaN	72158	30	0	31499	0.106				-1	 	0	97	343.88094452945575	1028.6210041885672	3	343.8815612792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5091	2933	8021
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8027	23.606	NaN	14597	30	0	1313.7	0.035	+			16687	HISTPLVSK	9	88	491.2895873978068	980.5646218624137	2	491.29010009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HISTPLVSK_	ENSG00000174516|ENST00000320740|PELI3;nc|ENSG00000174516|Q8N2H9-2|PELI3;nc|ENSG00000174516|Q8N2H9-4|PELI3	65.46538089061403	0.16805504838372562	6				NaN	NaN	0	NaN	5092	2933	8021
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8028	23.607	NaN	13395	30	0	6105.9	0.144	+			47837	VSLAQAKIEKI	11	72	400.58309566678133	1198.727457600544	3	400.5833740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VSLAQAKIEKI_	ENSG00000181404|ENST00000696149|WASHC1;ENSG00000182484|ENST00000359512|WASH6P;ENST00000400706.3_1_12:87289-88257:+|nuORF;ENST00000557932.5_1_15:102506277-102513446:+|nuORF;ENST00000568710.1_1_16:67585-84971:-|nuORF;nc|ENSG00000185596|C4AMC7|WASH3P;nc|ENSG00000234769|A8MWX3|WASH4P;nc|ENSG00000291134|Q6VEQ5|WASH2P;nc|ENSG00000292372|Q9NQA3|WASH6P	33.03940026070387	0.6432348334061824	6				NaN	NaN	0	NaN	5093	2933	8021
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8045	23.644	NaN	123830	30	0	25633	0.182	+			36411	SETNDTKVL	9	97	503.75559532666983	1005.4966377201397	2	503.7558288574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SETNDTKVL_	ENSG00000111057|ENST00000388835|KRT18;ENST00000453838.2_1_1:182928211-182928406:-|nuORF	141.52041321563706	0.009766778904176347	6				NaN	NaN	0	NaN	5107	2936	8044
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8046	23.647	NaN	23892	30	0	11388	0.106	+			51294	YSAQSAVD	8	58	420.68984929233034	839.3651456514607	2	420.6900329589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YSAQSAVD_	ENSG00000177105|ENST00000351018|RHOG	35.61828744233558	0.6843154725607303	6				NaN	NaN	0	NaN	5108	2936	8044
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8047	23.649	NaN	23589	30	0	4210.2	0.106	+			16415	HERGSLASL	9	73	485.2587461523093	968.5029393714186	2	485.2587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HERGSLASL_	CTNND1|p.E842Kfs*10|1|0.19|ENSG00000198561|chr11:57810192-57810192|A/-|frameshift_variant;CTNND1|p.Q800Tfs*4|1|0.46|ENSG00000198561|chr11:57809427-57809428|-/A|frameshift_variant;CTNND1|p.S895Ifs*8|1|0.33|ENSG00000198561|chr11:57814353-57814354|-/A|frameshift_variant;ENSG00000198561|ENST00000399050|CTNND1;nc|ENSG00000198561|O60716-10|CTNND1;nc|ENSG00000198561|O60716-11|CTNND1;nc|ENSG00000198561|O60716-12|CTNND1;nc|ENSG00000198561|O60716-13|CTNND1;nc|ENSG00000198561|O60716-14|CTNND1;nc|ENSG00000198561|O60716-15|CTNND1;nc|ENSG00000198561|O60716-16|CTNND1;nc|ENSG00000198561|O60716-17|CTNND1;nc|ENSG00000198561|O60716-18|CTNND1;nc|ENSG00000198561|O60716-19|CTNND1;nc|ENSG00000198561|O60716-2|CTNND1;nc|ENSG00000198561|O60716-20|CTNND1;nc|ENSG00000198561|O60716-21|CTNND1;nc|ENSG00000198561|O60716-22|CTNND1;nc|ENSG00000198561|O60716-23|CTNND1;nc|ENSG00000198561|O60716-24|CTNND1;nc|ENSG00000198561|O60716-25|CTNND1;nc|ENSG00000198561|O60716-26|CTNND1;nc|ENSG00000198561|O60716-27|CTNND1;nc|ENSG00000198561|O60716-28|CTNND1;nc|ENSG00000198561|O60716-29|CTNND1;nc|ENSG00000198561|O60716-3|CTNND1;nc|ENSG00000198561|O60716-30|CTNND1;nc|ENSG00000198561|O60716-31|CTNND1;nc|ENSG00000198561|O60716-32|CTNND1;nc|ENSG00000198561|O60716-4|CTNND1;nc|ENSG00000198561|O60716-5|CTNND1;nc|ENSG00000198561|O60716-6|CTNND1;nc|ENSG00000198561|O60716-7|CTNND1;nc|ENSG00000198561|O60716-8|CTNND1;nc|ENSG00000198561|O60716-9|CTNND1	127.46168284122857	0.016682644177004526	6				NaN	NaN	0	NaN	5109	2936	8044
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8048	23.651	NaN	19748	30	0	5486.7	0.106	+			23612	LAPHSSKRR	9	67	351.2091346836219	1050.6055746510658	3	351.2095947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LAPHSSKRR_	ENST00000426250.3_1_12:72665898-72666905:-|nuORF	31.954861631926434	0.5046124803899898	6				NaN	NaN	0	NaN	5110	2936	8044
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8049	23.652	NaN	19876	30	0	12852	0.106	+			35343	SAPDNRPAL	9	72	470.7453457776561	939.4761386221122	2	470.74517822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SAPDNRPAL_	ENSG00000185499|ENST00000620103|MUC1;nc|ENSG00000185499|P15941-2|MUC1;nc|ENSG00000185499|P15941-3|MUC1;nc|ENSG00000185499|P15941-4|MUC1;nc|ENSG00000185499|P15941-5|MUC1;nc|ENSG00000185499|P15941|MUC1	52.936696900407355	0.27249468807391813	6				NaN	NaN	0	NaN	5111	2936	8044
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8050	23.654	NaN	16794	30	0	2436.7	0.106	+			23449	LADPSAKAV	9	68	436.24742758727456	870.4803022413491	2	436.2474060058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LADPSAKAV_	ENSG00000107854|ENST00000371627|TNKS2;ENSG00000173273|ENST00000310430|TNKS;nc|ENSG00000173273|O95271-2|TNKS;TNKS|p.N555Kfs*2|1|0.29|ENSG00000173273|chr8:9710033-9710034|-/A|frameshift_variant;TNKS2|p.K349Nfs*8|1|0.47|ENSG00000107854|chr10:91828344-91828344|A/-|frameshift_variant;TNKS2|p.M193*|1|0.31|ENSG00000107854|chr10:91819496-91819496|A/-|frameshift_variant;TNKS2|p.N622Tfs*29|1|0.33|ENSG00000107854|chr10:91842189-91842189|A/-|frameshift_variant	93.1432384553994	0.056003526918089595	6				NaN	NaN	0	NaN	5112	2936	8044
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8051	23.656	NaN	13247	30	0	1197.1	0.035			+	45223	TVNTTHITI	9	88	500.27684736608205	998.5391417989641	2	500.7801513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TVNTTHITI_	REV__ARSJ|p.F197Lfs*54|1|0.26|ENSG00000180801|chr4:113903483-113903483|A/-|frameshift_variant	74.25504064058377	0.12238981753128622	6				NaN	NaN	0	NaN	5113	2936	8044
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8069	23.694	NaN	28557	30	0	3459.7	0.214	+			17284	IAASRSAVM	9	92	453.24526762418134	904.4759823151627	2	453.2474060058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IAASRSAVM_	ENSG00000119280|ENST00000366663|C1orf198	65.46538089061403	0.16805504838372562	6				NaN	NaN	0	NaN	5128	2939	8068
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8070	23.697	NaN	23312	30	0	10517	0.106	+			10522	EVYHTTVLK	9	86	545.3012167533248	1088.5878805734494	2	545.3021240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EVYHTTVLK_	ENST00000396185.7_1_3:41241009-41266025:+|nuORF;ENST00000453024.5_1_3:41241021-41265725:+|nuORF	101.60071028292904	0.0375685401170269	6				NaN	NaN	0	NaN	5129	2939	8068
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8071	23.699	NaN	19686	30	0	1479.2	0.106	+			38009	SPLKTTSSY	9	81	492.25549472190835	982.4964365106167	2	492.2559509277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SPLKTTSSY_	ENSG00000124429|ENST00000262753|POF1B;nc|ENSG00000124429|Q8WVV4-1|POF1B;nc|ENSG00000124429|Q8WVV4-3|POF1B;POF1B|p.T130Lfs*12|1|0.14|ENSG00000124429|chrX:85359600-85359601|-/AG|frameshift_variant	146.78539889680295	0.007618400906539062	6				NaN	NaN	0	NaN	5130	2939	8068
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8072	23.701	NaN	30727	30	0	8970.4	0.106	+			19714	KDSYLDFIE	9	87	565.2731524599793	1128.5317519867585	2	565.2745971679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KDSYLDFIE_	tr|U7SIN9|U7SIN9_FUSNUV-typeprotonATPasesubunitEOS=FusobacteriumnucleatumCTI-5OX=1316586GN=atpEPE=3SV=1	104.74654710444128	0.034358562718640136	6				NaN	NaN	0	NaN	5131	2939	8068
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8073	23.703	NaN	38080	30	0	6347.6	0.106	+			16475	HETGTKITI	9	92	500.27684736608205	998.5391417989641	2	500.2774353027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HETGTKITI_	ENSG00000073792|ENST00000382199|IGF2BP2;ENST00000496495.1_1_3:185393074-185393625:-|nuORF;ENST00000550858.1_1_12:42681476-42682067:+|nuORF;nc|ENSG00000073792|Q9Y6M1-1|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-3|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-4|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-5|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-6|IGF2BP2	139.97047562133406	0.010493916756945389	6				NaN	NaN	0	NaN	5132	2939	8068
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8074	23.705	NaN	82417	30	0	53124	0.034				-1	 	0	81	459.2498194265477	916.4850859198954	2	459.25067138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5133	2939	8068
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8075	23.705	NaN	17649	30	0	1613.4	0.14	+			35844	SEDEPTRSL	9	96	517.2425008650024	1032.4704487968047	2	517.2439575195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SEDEPTRSL_	ENSG00000083312|ENST00000337273|TNPO1;ENSG00000105576|ENST00000425528|TNPO2;ENST00000588484.1_1_19:12826020-12830096:-|nuORF;ENST00000589956.5_1_19:12822112-12831764:-|nuORF;nc|ENSG00000083312|Q92973-2|TNPO1;nc|ENSG00000105576|O14787-2|TNPO2;TNPO1|p.C844Vfs*45|4|0.31|ENSG00000083312|chr5:72903718-72903718|T/-|frameshift_variant;TNPO2|p.H347Pfs*4|1|0.35|ENSG00000105576|chr19:12711373-12711374|-/G|frameshift_variant	66.96192283764107	0.15557981141143568	6				NaN	NaN	0	NaN	5134	2939	8068
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8093	23.741	NaN	230940	30	0	78664	0.131	+			18034	IINSSITTK	9	75	488.78674614422954	975.5589393552591	2	488.787353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IINSSITTK_	CCT3|p.A379Lfs*9|1|0.21|ENSG00000163468|chr1:156312061-156312061|C/-|frameshift_variant;CCT3|p.K197Nfs*23|1|0.17|ENSG00000163468|chr1:156320857-156320857|T/-|frameshift_variant;CCT3|p.L350Ffs*9|1|0.49|ENSG00000163468|chr1:156312146-156312147|-/A|frameshift_variant;ENSG00000163468|ENST00000295688|CCT3;nc|ENSG00000163468|P49368-2|CCT3	154.0112374973812	0.005934173778894772	6				NaN	NaN	0	NaN	5149	2942	8092
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8094	23.743	NaN	40287	30	0	6625.9	0.106				-1	 	0	100	515.786936794523	1029.5593206558458	2	515.7876586914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5150	2942	8092
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8095	23.745	NaN	22907	30	0	6167	0.106	+			32499	QVQAAQFAK	9	84	495.7713644376551	989.5281759421102	2	495.7717590332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QVQAAQFAK_	ENSG00000135441|ENST00000548925|BLOC1S1;nc|ENSG00000135441|P78537-2|BLOC1S1	99.37495909608758	0.03983967222258828	6				NaN	NaN	0	NaN	5151	2942	8092
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8096	23.747	NaN	42001	30	0	8026.1	0.106				-1	 	0	90	465.7244270535893	929.4343011739786	2	465.72467041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5152	2942	8092
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8097	23.749	NaN	10269	30	0	2021	0.106	+			13280	GIVTDSVRGNL	11	74	377.5440026821307	NaN	0	377.543701171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GIVTDSVRGNL_	ENSG00000116962|ENST00000264187|NID1;nc|ENSG00000116962|P14543-2|NID1	19.996771675451527	0.456735970842152	6				NaN	NaN	0	NaN	5153	2942	8092
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8098	23.751	NaN	22204	30	0	4717.6	0.106			+	37236	SKRMQESTK	9	78	555.7828395864616	NaN	0	555.7828369140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_SKRM(Oxidation (M))QESTK_	REV__ENST00000524669.5_1_11:57416530-57416830:-|nuORF	98.62937762414208	0.024200618960070384	6				NaN	NaN	0	NaN	5154	2942	8092
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8099	23.753	NaN	7545.9	30	0	1317.7	0.037			+	48896	VVDKIPKAIH	10	75	373.9006863350436	1118.6802296053309	3	373.9009094238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VVDKIPKAIH_	REV__CCDC66|p.V732*|1|0.25|ENSG00000180376|chr3:56617454-56617454|A/-|frameshift_variant;REV__ENSG00000180376|ENST00000394672|CCDC66;REV__ENST00000471681.5_1_3:56606414-56647710:+|nuORF;REV__nc|ENSG00000180376|A2RUB6-3|CCDC66	24.519189625965996	0.6795976720565101	6				NaN	NaN	0	NaN	5155	2942	8092
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8117	23.79	NaN	156840	30	0	42028	0.179				-1	 	0	96	452.2419955788477	902.4694382244954	2	452.2424011230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5170	2945	8116
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8118	23.793	NaN	10693	30	0	2359.5	0.106			+	25691	LRKEEKEME	9	83	596.30505261057	1190.5955522879399	2	596.3056030273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LRKEEKEME_	REV__ENSG00000068400|ENST00000376423|GRIPAP1;REV__ENST00000473581.5_1_X:48834665-48847670:-|nuORF;REV__nc|ENSG00000068400|Q4V328-2|GRIPAP1;REV__nc|ENSG00000068400|Q4V328-4|GRIPAP1	53.08895987439943	0.27122541748218487	6				NaN	NaN	0	NaN	5171	2945	8116
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8119	23.795	NaN	10587	30	0	2115.3	0.106	+			32871	RDFQHVEKL	9	73	391.2114928506477	1170.6126491521431	3	391.21197509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RDFQHVEKL_	ENSG00000178078|ENST00000594605|STAP2;nc|ENSG00000178078|Q9UGK3-2|STAP2	47.227680397652996	0.3354815899219835	6				NaN	NaN	0	NaN	5172	2945	8116
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8120	23.797	NaN	12228	30	0	3136.5	0.106	+			17162	HTIDWVREK	9	79	395.21200699904114	1182.6141915973235	3	395.2119445800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HTIDWVREK_	CLCN3|p.D799Ifs*17|1|0.33|ENSG00000109572|chr4:169719928-169719928|A/-|frameshift_variant;CLCN3|p.F354Lfs*4|1|0.33|ENSG00000109572|chr4:169697228-169697228|T/-|frameshift_variant;CLCN3|p.R311Gfs*14|4|0.22|ENSG00000109572|chr4:169692309-169692309|A/-|frameshift_variant;CLCN3|p.W193Cfs*6|1|0.1|ENSG00000109572|chr4:169689202-169689203|-/TTGGA|frameshift_variant;CLCN3|p.Y378Mfs*19|1|0.27|ENSG00000109572|chr4:169697298-169697298|T/-|frameshift_variant;ENSG00000109572|ENST00000513761|CLCN3;ENST00000502998.1_1_4:170601253-170601544:+|nuORF;nc|ENSG00000109572|P51790-2|CLCN3;nc|ENSG00000109572|P51790-4|CLCN3;nc|ENSG00000109572|P51790-5|CLCN3	54.722347961057174	0.257609425301511	6				NaN	NaN	0	NaN	5173	2945	8116
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8121	23.799	NaN	9956.6	30	0	741.35	0.106	+			39402	STDPAAPNLK	10	80	507.26671479154567	1012.5188766498914	2	507.2674560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STDPAAPNLK_	ENSG00000137076|ENST00000314888|TLN1;nc|ENSG00000137076|Q9Y490-2|TLN1;TLN1|p.P1628Rfs*20|1|0.44|ENSG00000137076|chr9:35707144-35707144|G/-|frameshift_variant	65.46538089061403	0.31613324008013116	6				NaN	NaN	0	NaN	5174	2945	8116
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8122	23.801	NaN	9610.6	30	0	2203.9	0.106	+			42440	TALNRRDTYR	10	77	422.5626753738843	1264.6661967218529	3	422.562744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TALNRRDTYR_	ENSG00000134313|ENST00000256707|KIDINS220;ENST00000488729.5_1_2:8870852-8965899:-|nuORF;KIDINS220|p.K1581Rfs*8|1|0.28|ENSG00000134313|chr2:8731294-8731294|T/-|frameshift_variant;KIDINS220|p.P1081Rfs*48|1|0.22|ENSG00000134313|chr2:8750284-8750284|G/-|frameshift_variant;KIDINS220|p.R1551Efs*38|1|0.08|ENSG00000134313|chr2:8731386-8731386|C/-|frameshift_variant;nc|ENSG00000134313|Q9ULH0-2|KIDINS220;nc|ENSG00000134313|Q9ULH0-3|KIDINS220;nc|ENSG00000134313|Q9ULH0-4|KIDINS220	43.650786325866115	0.5155049133366767	6				NaN	NaN	0	NaN	5175	2945	8116
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8123	23.803	NaN	3318.5	30	0	1501.7	0.035				-1	 	0	44	326.86188470426436	977.5638247129931	3	326.8624572753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5176	2945	8116
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8141	23.839	NaN	38344	30	0	4677	0.214	+			21721	KQKLIDTMAKQ	11	103	440.58307117218783	1318.7273841167635	3	440.5833740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_KQKLIDTM(Oxidation (M))AKQ_	EXOC6B|p.V798M|1|0.21|ENSG00000144036|chr2:72179379-72179379|C/T|missense_variant	58.2462437865262	0.33910980880557884	6				NaN	NaN	0	NaN	5191	2948	8140
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8142	23.843	NaN	20832	30	0	2348.4	0.106				-1	 	0	93	486.78919593530264	971.5638389374053	2	486.78955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5192	2948	8140
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8143	23.845	NaN	7340.9	30	0	1529.5	0.106	+			2899	ASATALVSR	9	72	438.25061460488064	NaN	0	438.2506103515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASATALVSR_	ENSG00000167491|ENST00000683918|GATAD2A;nc|ENSG00000167491|Q86YP4-2|GATAD2A;nc|ENSG00000167491|Q86YP4|GATAD2A	138.06239232086	0.0004957345888817657	6				NaN	NaN	0	NaN	5193	2948	8140
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8144	23.847	NaN	32763	30	0	5632.8	0.106	+			13792	GQHTVLLVK	9	79	497.8053411011831	993.5961292691662	2	497.8055419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GQHTVLLVK_	ENSG00000180198|ENST00000683442|RCC1;nc|ENSG00000180198|P18754-2|RCC1	169.6522961985778	0.0028262690464207238	6				NaN	NaN	0	NaN	5194	2948	8140
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8145	23.849	NaN	25334	30	0	4622.2	0.106	+			44714	TTLAFKPIKK	10	86	382.91265294132563	1145.7161294241769	3	382.9129638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TTLAFKPIKK_	ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A	85.86182877749512	0.1547657473298402	6				NaN	NaN	0	NaN	5195	2948	8140
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8146	23.85	NaN	25794	30	0	6384.5	0.032				-1	 	0	67	413.2263100510309	824.4380671688618	2	413.22662353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5196	2948	8140
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8147	23.851	NaN	8274.7	30	0	513.07	0.143				-1	AHLLASPCTSR	11	73	606.8106989676472	1211.6068450020944	2	606.8115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_AHLLASPC(Carbamidomethyl (C))TSR_	ENSG00000110422|ENST00000303296|HIPK3;nc|ENSG00000110422|Q9H422-2|HIPK3	32.81241826257853	0.645615689454792	6				NaN	NaN	0	NaN	5197	2948	8140
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8165	23.89	NaN	92291	30	0	12053	0.214	+			15531	GVDDKFYSK	9	104	529.7606486257872	1057.5067443183743	2	529.7615356445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVDDKFYSK_	ENSG00000105254|ENST00000221855|TBCB;ENST00000392178.8_1_19:36606435-36612715:+|nuORF;ENST00000481742.1_1_19:36606435-36607215:+|nuORF;ENST00000589308.1_1_19:36606815-36612715:+|nuORF;nc|ENSG00000105254|Q99426-2|TBCB	155.5846463517096	0.005567437401040498	6				NaN	NaN	0	NaN	5212	2951	8164
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8166	23.894	NaN	49568	30	0	22281	0.106				-1	 	0	73	353.50940329837374	1057.5063804953213	3	353.5098571777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5213	2951	8164
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8167	23.896	NaN	12748	30	0	6294.3	0.106	+			8918	EEVKDRCTL	9	72	546.7709433968246	1091.527333860449	2	546.7717895507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EEVKDRCTL_	ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65622809-65623088:-|nuORF	60.11826168202944	0.21262886028301267	6				NaN	NaN	0	NaN	5214	2951	8164
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8168	23.898	NaN	3223	30	0	620.19	0.106	+			859	AEGTHPGIAPQ	11	45	359.8484854785519	1076.5236270358557	3	359.848876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEGTHPGIAPQ_	ENSG00000134250|ENST00000256646|NOTCH2;NOTCH2|p.I2304Hfs*9|1|0.38|ENSG00000134250|chr1:119915812-119915813|-/G|frameshift_variant	31.529811441608018	0.6590691889962369	6				NaN	NaN	0	NaN	5215	2951	8164
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8169	23.9	NaN	5509.6	30	0	644.56	0.106				-1	LLMVWLEF	8	73	533.7848278639083	1065.5551027946165	2	533.785888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_LLM(Oxidation (M))VWLEF_	ENST00000366672.4_1_1:230401060-230410203:+|nuORF	28.2542754592877	0.7411748056684583	6				NaN	NaN	0	NaN	5216	2951	8164
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8170	23.902	NaN	11402	30	0	3925.5	0.036				-1	APFILFGRM	9	47	356.52858444295225	1066.5639239290567	3	356.52911376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_APFILFGRM(Oxidation (M))_	ENST00000334082.10_1_5:78809235-78809352:-|nuORF	21.9598887501803	0.5980208138527809	6				NaN	NaN	0	NaN	5217	2951	8164
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8171	23.902	NaN	4212.8	30	0	391.93	0.139	+			28444	NEVVQVHAA	9	71	483.7527035539926	NaN	0	483.7535400390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NEVVQVHAA_	ENSG00000171940|ENST00000371471|ZNF217;ZNF217|p.A693Lfs*10|1|0.48|ENSG00000171940|chr20:53576687-53576687|C/-|frameshift_variant;ZNF217|p.F480Sfs*35|1|0.41|ENSG00000171940|chr20:53578378-53578378|A/-|frameshift_variant;ZNF217|p.T198K|1|0.19|ENSG00000171940|chr20:53582234-53582234|G/T|missense_variant	60.11826168202944	0.14881452885248947	6				NaN	NaN	0	NaN	5218	2951	8164
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8189	23.94	NaN	55356	30	0	7787.4	0.214	+			14872	GTLNQPLTK	9	109	486.27982065407184	970.5450883749437	2	486.27935791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTLNQPLTK_	ENSG00000103671|ENST00000261884|TRIP4	128.60217544463768	0.015992218256422188	6				NaN	NaN	0	NaN	5233	2954	8188
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8190	23.944	NaN	11724	30	0	3292.9	0.106	+			50546	YARSVHEEF	9	80	569.2691952329535	1136.523837532707	2	569.270263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YARSVHEEF_	ENSG00000078808|ENST00000360001|SDF4;ENST00000465727.5_1_1:1152894-1153089:-|nuORF;ENST00000478938.1_1_1:1152894-1154464:-|nuORF;ENST00000494748.1_1_1:1152894-1154464:-|nuORF;nc|ENSG00000078808|Q9BRK5-2|SDF4;nc|ENSG00000078808|Q9BRK5-5|SDF4;nc|ENSG00000078808|Q9BRK5|SDF4	106.88024417677582	0.032181361622142884	6				NaN	NaN	0	NaN	5234	2954	8188
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8191	23.946	NaN	13149	30	0	2313.2	0.106	+			24131	LEKTGVAV	8	69	408.74455100649993	815.4745490797999	2	408.7447509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LEKTGVAV_	ENSG00000196924|ENST00000369850|FLNA;FLNA|p.A1026Lfs*20|1|0.42|ENSG00000196924|chrX:154361439-154361439|C/-|frameshift_variant;FLNA|p.G2237Efs*109|1|0.28|ENSG00000196924|chrX:154352240-154352240|C/-|frameshift_variant;FLNA|p.Q1716Sfs*23|2|0.38|ENSG00000196924|chrX:154354896-154354896|G/-|frameshift_variant;FLNA|p.R2520Vfs*16|1|0.7|ENSG00000196924|chrX:154349560-154349560|G/-|frameshift_variant;nc|ENSG00000196924|P21333-2|FLNA	110.11987700582712	0.24509564897437786	6				NaN	NaN	0	NaN	5235	2954	8188
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8192	23.948	NaN	12327	30	0	1313.5	0.106			+	9128	EGLKMLRAT	9	91	509.79143618027035	1017.5683194273407	2	509.7926025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EGLKMLRAT_	REV__FKBP6|p.P81A|1|0.08|ENSG00000077800|chr7:73329425-73329425|C/G|missense_variant	79.71258880314673	0.09879134589249085	6				NaN	NaN	0	NaN	5236	2954	8188
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8193	23.95	NaN	8979.3	30	0	1491.1	0.106	+			45931	VAQSVFGHI	9	72	479.26201129066374	956.5094696481275	2	479.2715148925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VAQSVFGHI_	MYBBP1A|p.R671Q|1|0.47|ENSG00000132382|chr17:4545671-4545671|C/T|missense_variant	51.33545320467046	0.2872990594074956	6				NaN	NaN	0	NaN	5237	2954	8188
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8194	23.951	NaN	4138.4	30	0	329.06	0.036	+			31659	QNDIHHKVL	9	68	552.3022781328077	NaN	0	552.30126953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QNDIHHKVL_	ENSG00000138757|ENST00000359707|G3BP2;nc|ENSG00000138757|Q9UN86-2|G3BP2	47.657333605630114	0.2228375344433429	6				NaN	NaN	0	NaN	5238	2954	8188
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8195	23.952	NaN	20788	30	0	3397.3	0.14	+			41861	SVTGKVGTDI	10	88	488.76842886670823	975.5223048002165	2	488.7686462402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVTGKVGTDI_	ENST00000424976.1_1_1:187532898-187533042:+|nuORF	53.08895987439943	0.42869529153390606	6				NaN	NaN	0	NaN	5239	2954	8188
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8213	23.99	NaN	304490	30	0	201360	0.159	+			33829	RQTWLLLHMY	10	109	454.24520281695845	1359.7137790510753	3	454.2453918457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RQTWLLLHMY_	ENSG00000146540|ENST00000397098|C7orf50	32.81241826257853	0.6118718159329168	6				NaN	NaN	0	NaN	5254	2957	8212
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8214	23.993	NaN	11848	30	0	1816.7	0.106	+			41195	SVLDKSLTK	9	77	495.79452700617264	989.5745010791453	2	495.794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVLDKSLTK_	ENSG00000198265|ENST00000358691|HELZ;ENST00000578938.1_1_17:65172688-65184471:-|nuORF;HELZ|p.L1089Ffs*20|1|0.05|ENSG00000198265|chr17:67128771-67128772|-/GTTAATG|frameshift_variant;nc|ENSG00000198265|P42694-2|HELZ	143.37361013837676	0.008897369944672323	6				NaN	NaN	0	NaN	5255	2957	8212
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8215	23.995	NaN	30683	30	0	4908.2	0.106				-1	 	0	94	521.2580191772003	1040.5014854212004	2	521.2589111328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5256	2957	8212
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8216	23.997	NaN	25208	30	0	3519	0.106			+	37028	SIQSEMRQQ	9	83	561.7664142145599	1121.5182754959196	2	561.768310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_SIQSEM(Oxidation (M))RQQ_	REV__B2M|p.S16Afs*27|1|0.18|ENSG00000166710|chr15:44711588-44711591|TCTT/-|frameshift_variant	109.47833844074708	0.029530294723441826	6				NaN	NaN	0	NaN	5257	2957	8212
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8217	23.999	NaN	20008	30	0	3808.7	0.106	+			4921	ATQLLKLAHK	10	78	374.90426334746564	1121.690960642597	3	374.9046325683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATQLLKLAHK_	ENSG00000148303|ENST00000323345|RPL7A;ENST00000424559.2_1_22:19780074-19780431:+|nuORF;ENST00000434317.1_1_7:102395625-102396051:+|nuORF;ENST00000437848.1_1_1:46117146-46117242:-|nuORF;ENST00000463740.5_1_9:136215098-136217195:+|nuORF;ENST00000468834.1_1_10:33346560-33347304:-|nuORF;ENST00000473054.1_1_14:68805457-68806021:-|nuORF;ENST00000485706.5_1_9:136216467-136216912:+|nuORF;ENST00000486157.1_1_5:78825151-78825526:+|nuORF	99.01295224348159	0.08062808246117298	6				NaN	NaN	0	NaN	5258	2957	8212
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8218	24.001	NaN	17845	30	0	2205.8	0.106				-1	 	0	83	433.2659509366125	864.517348940025	2	433.26629638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5259	2957	8212
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8219	24.002	NaN	14038	30	0	2166.4	0.038	+			10951	FDVKSGSAVHK	11	87	392.2119729393505	1173.6140894182515	3	392.2121887207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FDVKSGSAVHK_	ENSG00000141076|ENST00000314423|UTP4;nc|ENSG00000141076|Q969X6-2|UTP4;nc|ENSG00000141076|Q969X6-3|UTP4	93.44185321454538	0.08468467990978058	6				NaN	NaN	0	NaN	5260	2957	8212
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8237	24.038	NaN	25708	30	0	4475.6	0.214				-1	 	0	79	504.7164614868374	1007.4183700404748	2	504.7171630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5275	2960	8236
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8238	24.042	NaN	16237	30	0	2675.6	0.106	+			29105	NTNIPIGNK	9	81	485.76990051685146	969.525248100503	2	485.7692565917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NTNIPIGNK_	ENSG00000115464|ENST00000398571|USP34;nc|ENSG00000115464|Q70CQ2-2|USP34;nc|ENSG00000115464|Q70CQ2-3|USP34;USP34|p.L2716Sfs*30|1|0.05|ENSG00000115464|chr2:61214596-61214597|-/AAGCTGA|frameshift_variant;USP34|p.L3228*|1|0.22|ENSG00000115464|chr2:61190564-61190564|A/-|frameshift_variant;USP34|p.N788Kfs*4|1|0.42|ENSG00000115464|chr2:61343951-61343952|-/T|frameshift_variant;USP34|p.N788Yfs*3|1|0.09|ENSG00000115464|chr2:61343952-61343953|TT/-|frameshift_variant	60.11826168202944	0.21262886028301267	6				NaN	NaN	0	NaN	5276	2960	8236
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8239	24.044	NaN	23920	30	0	3046.2	0.106	+			34798	RYLEKNVKL	9	97	388.2361788360448	1161.6867071083345	3	388.2362060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RYLEKNVKL_	ENSG00000137574|ENST00000260129|TGS1;ENST00000523948.5_1_8:56686169-56737149:+|nuORF;TGS1|p.G559Rfs*2|1|0.17|ENSG00000137574|chr8:55799039-55799040|-/A|frameshift_variant	101.45984612302182	0.0377122763612125	6				NaN	NaN	0	NaN	5277	2960	8236
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8240	24.046	NaN	5263.4	30	0	1534.1	0.106	+			34799	RYLEKNVKL	9	75	581.8503381297896	1161.6861233263792	2	581.8513793945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RYLEKNVKL_	ENSG00000137574|ENST00000260129|TGS1;ENST00000523948.5_1_8:56686169-56737149:+|nuORF;TGS1|p.G559Rfs*2|1|0.17|ENSG00000137574|chr8:55799039-55799040|-/A|frameshift_variant	63.42647028704847	0.1850514934184437	6				NaN	NaN	0	NaN	5278	2960	8236
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8241	24.048	NaN	11007	30	0	2824.7	0.106				-1	 	0	82	497.7632349922783	993.5119170513566	2	497.76373291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5279	2960	8236
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8242	24.05	NaN	5546.3	30	0	555.47	0.032	+			16954	HPPGTKSA	8	67	397.71114357274996	793.4077342122999	2	397.71136474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HPPGTKSA_	ENSG00000106948|ENST00000374088|AKNA;nc|ENSG00000106948|Q7Z591-2|AKNA;nc|ENSG00000106948|Q7Z591-5|AKNA;nc|ENSG00000106948|Q7Z591-7|AKNA;nc|ENSG00000106948|Q7Z591-8|AKNA	33.51558372728122	0.7005509609380386	6				NaN	NaN	0	NaN	5280	2960	8236
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8243	24.05	NaN	7574.8	30	0	1358.9	0.14			+	18506	ISIGTFSFF	9	81	509.76429657620525	1017.5140402192105	2	509.7655029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ISIGTFSFF_	REV__tr|U7SSU4|U7SSU4_FUSNUPeptide/nickeltransportsystempermeaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01499PE=3SV=1	71.29570347882199	0.13518600952103718	6				NaN	NaN	0	NaN	5281	2960	8236
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8261	24.09	NaN	46635	30	0	10932	0.214				-1	 	0	84	537.3130854837891	1072.6116180343781	2	537.3141479492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5296	2963	8260
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8262	24.093	NaN	27188	30	0	2464	0.106	+			12426	GEAQVGKTSL	10	89	495.26602469911575	988.5174964650315	2	495.2665100097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEAQVGKTSL_	ENSG00000140983|ENST00000315082|RHOT2;ENST00000562598.5_1_16:718199-720176:+|nuORF;ENST00000562708.5_1_16:718199-718465:+|nuORF;ENST00000567017.5_1_16:718199-721765:+|nuORF;ENST00000568950.5_1_16:718199-721765:+|nuORF;ENST00000569675.5_1_16:718199-718652:+|nuORF	147.73206827945663	0.008898223230177705	6				NaN	NaN	0	NaN	5297	2963	8260
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8263	24.095	NaN	12852	30	0	2456.8	0.106	+			15988	HALGGSSAL	9	62	406.71663884563895	NaN	0	406.7166442871094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HALGGSSAL_	ENSG00000158019|ENST00000379624|BABAM2;nc|ENSG00000158019|Q9NXR7-1|BABAM2;nc|ENSG00000158019|Q9NXR7-3|BABAM2;nc|ENSG00000158019|Q9NXR7-4|BABAM2	68.484700416344	0.11313159791952428	6				NaN	NaN	0	NaN	5298	2963	8260
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8264	24.097	NaN	26193	30	0	9043	0.106				-1	 	0	94	428.91828711188515	1283.7330319358555	3	428.91876220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5299	2963	8260
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8265	24.099	NaN	10056	30	0	1476.3	0.106	+			10393	EVDPDTKEM	9	74	532.2335498767021	1062.4525468202041	2	532.2347412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EVDPDTKEM_	ENSG00000182774|ENST00000647841|RPS17;ENST00000396783.2_1_6:29457050-29457287:-|nuORF;ENST00000423610.1_1_22:32435574-32435880:+|nuORF;ENST00000461663.1_1_5:116052154-116052343:+|nuORF;ENST00000561068.5_3_15:83205554-83208094:-|nuORF	124.08010499294276	0.018729767491916592	6				NaN	NaN	0	NaN	5300	2963	8260
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8266	24.101	NaN	8748.1	30	0	1968.8	0.036	+			34248	RTGPPMGSRF	10	85	553.2814910815247	1104.5484292298493	2	553.28271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RTGPPMGSRF_	ENSG00000106682|ENST00000265753|EIF4H;nc|ENSG00000106682|Q15056-2|EIF4H	74.1650062923329	0.2432923583094885	6				NaN	NaN	0	NaN	5301	2963	8260
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8267	24.101	NaN	8234.5	30	0	1350.4	0.141	+			25430	LPNEGRNDY	9	83	539.2510260749137	1076.4874992166274	2	539.2518310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LPNEGRNDY_	ENSG00000062598|ENST00000290246|ELMO2;nc|ENSG00000062598|Q96JJ3-3|ELMO2	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	5302	2963	8260
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8285	24.141	NaN	225270	30	0	141110	0.214				-1	 	0	102	349.87754763098224	1046.6108134931467	3	349.8780212402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5317	2966	8284
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8286	24.144	NaN	20459	30	0	4681.1	0.106				-1	 	0	84	430.7448930106335	859.4752330880671	2	430.7452697753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5318	2966	8284
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8287	24.146	NaN	39867	30	0	7748.3	0.106				-1	 	0	88	471.765779341406	941.517005749612	2	471.7662048339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5319	2966	8284
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8288	24.148	NaN	34825	30	0	7940.3	0.106	+			45222	TVNTSLVGK	9	82	459.7656221229334	NaN	0	459.7660827636719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TVNTSLVGK_	CCDC66|p.A265Sfs*9|1|0.15|ENSG00000180376|chr3:56567024-56567025|-/A|frameshift_variant;CCDC66|p.T207Nfs*2|2|0.31|ENSG00000180376|chr3:56566661-56566662|-/A|frameshift_variant;CCDC66|p.V732*|1|0.25|ENSG00000180376|chr3:56617454-56617454|A/-|frameshift_variant;ENSG00000180376|ENST00000394672|CCDC66;ENST00000422788.5_1_3:56595403-56599181:+|nuORF;ENST00000469966.1_1_3:56592935-56598176:+|nuORF;ENST00000472582.5_1_3:56591255-56599181:+|nuORF;nc|ENSG00000180376|A2RUB6-2|CCDC66;nc|ENSG00000180376|A2RUB6-3|CCDC66;nc|ENSG00000180376|A2RUB6-4|CCDC66	82.83050618871818	0.06168474706713223	6				NaN	NaN	0	NaN	5320	2966	8284
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8289	24.15	NaN	11888	30	0	4401.9	0.106			+	48054	VSSKAAAAAGP	11	62	465.25545192423317	928.4963509152664	2	465.2559509277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSSKAAAAAGP_	REV__ENST00000587457.1_1_19:55741658-55741895:-|nuORF	27.882242232435846	0.6973292152807183	6				NaN	NaN	0	NaN	5321	2966	8284
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8290	24.152	NaN	31885	30	0	3816.7	0.033				-1	 	0	82	424.2548771270268	846.4952013208537	2	424.2553405761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5322	2966	8284
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8291	24.152	NaN	10177	30	0	1373.4	0.141			+	22758	KVEMGGKNQP	10	79	544.2814792959244	1086.5484056586488	2	544.2824096679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KVEMGGKNQP_	REV__ENSG00000148399|ENST00000277540|DPH7;REV__ENST00000460572.1_1_9:140470815-140473160:-|nuORF;REV__ENST00000472113.5_1_9:140471923-140473334:-|nuORF	107.00750918261382	0.05688644658934505	6				NaN	NaN	0	NaN	5323	2966	8284
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8309	24.189	NaN	53720	30	0	18361	0.214			+	26256	LSSTPLHG	8	83	406.2185854042104	810.4226178752208	2	406.2189025878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSSTPLHG_	REV__ENSG00000140853|ENST00000688547|NLRC5;REV__nc|ENSG00000140853|Q86WI3-2|NLRC5;REV__nc|ENSG00000140853|Q86WI3-3|NLRC5;REV__nc|ENSG00000140853|Q86WI3-4|NLRC5;REV__nc|ENSG00000140853|Q86WI3-5|NLRC5;REV__nc|ENSG00000140853|Q86WI3-6|NLRC5;REV__NLRC5|p.F487Lfs*8|1|0.48|ENSG00000140853|chr16:57026401-57026401|T/-|frameshift_variant;REV__NLRC5|p.H1717Ifs*29|2|0.41|ENSG00000140853|chr16:57079112-57079112|C/-|frameshift_variant;REV__NLRC5|p.K611Rfs*3|1|0.42|ENSG00000140853|chr16:57026773-57026773|A/-|frameshift_variant;REV__NLRC5|p.P816Rfs*30|1|0.28|ENSG00000140853|chr16:57031430-57031430|C/-|frameshift_variant	57.81127852772723	0.5234495074909924	6				NaN	NaN	0	NaN	5338	2969	8308
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8310	24.193	NaN	17189	30	0	2412.9	0.106	+			36861	SIFKQPVTK	9	91	524.3127444949677	1046.6109360567352	2	524.3134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SIFKQPVTK_	ENSG00000071655|ENST00000434436|MBD3;ENSG00000134046|ENST00000256429|MBD2;ENST00000590830.5_1_19:1578341-1584901:-|nuORF;nc|ENSG00000071655|O95983-2|MBD3	114.8945686534367	0.024290463251177924	6				NaN	NaN	0	NaN	5339	2969	8308
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8311	24.195	NaN	27304	30	0	3952.8	0.106			+	31027	QETSPKKQL	9	89	529.7943542933408	1057.5741556534815	2	529.7933349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QETSPKKQL_	REV__ENSG00000142920|ENST00000294517|AZIN2;REV__ENST00000471119.5_1_1:33546965-33585780:+|nuORF;REV__ENST00000478204.5_1_1:33557816-33585780:+|nuORF;REV__ENST00000481886.5_1_1:33546965-33585780:+|nuORF;REV__ENST00000484656.5_1_1:33549518-33583718:+|nuORF;REV__nc|ENSG00000142920|Q96A70-2|AZIN2	82.7504851949679	0.08565546331141553	6				NaN	NaN	0	NaN	5340	2969	8308
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8312	24.197	NaN	23636	30	0	4705	0.106	+			26501	LTMKVAVNK	9	99	502.3013623505536	1002.5881717679072	2	502.30194091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LTMKVAVNK_	ENST00000418474.1_1_2:160472985-160473165:+|nuORF	88.17693792209575	0.07000514020414955	6				NaN	NaN	0	NaN	5341	2969	8308
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8313	24.198	NaN	5746	30	0	583.22	0.106			+	-1	AEQFGRGAL	9	72	495.75495203322345	NaN	0	495.7500305175781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))AEQFGRGAL_	REV__ENST00000486797.1_1_9:35738494-35738838:-|nuORF	60.11826168202944	0.14881452885248947	6				NaN	NaN	0	NaN	5342	2969	8308
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8314	24.2	NaN	6533	30	0	1261.8	0.035			+	23940	LDQKPAADK	9	68	493.2689664234442	984.5233799136885	2	493.2690734863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LDQKPAADK_	REV__ENSG00000186472|ENST00000333891|PCLO;REV__nc|ENSG00000186472|Q9Y6V0-6|PCLO;REV__PCLO|p.E1944Sfs*8|1|0.34|ENSG00000186472|chr7:82955124-82955124|T/-|frameshift_variant;REV__PCLO|p.K2442Sfs*2|4|0.29|ENSG00000186472|chr7:82953628-82953628|T/-|frameshift_variant;REV__PCLO|p.K3621Ifs*26|1|0.04|ENSG00000186472|chr7:82949726-82949727|-/CCAGATA|frameshift_variant;REV__PCLO|p.K4306Gfs*8|1|0.04|ENSG00000186472|chr7:82915067-82915070|TTTT/-|frameshift_variant;REV__PCLO|p.M3036Tfs*24|1|0.06|ENSG00000186472|chr7:82951481-82951482|-/G|frameshift_variant;REV__PCLO|p.N4248Kfs*31|1|0.28|ENSG00000186472|chr7:82915242-82915243|-/T|frameshift_variant;REV__PCLO|p.P1234Afs*11|1|0.31|ENSG00000186472|chr7:82966089-82966090|-/T|frameshift_variant;REV__PCLO|p.P2408Lfs*36|1|0.44|ENSG00000186472|chr7:82953730-82953730|G/-|frameshift_variant;REV__PCLO|p.Q3062Tfs*25|1|0.2|ENSG00000186472|chr7:82951405-82951406|-/G|frameshift_variant;REV__PCLO|p.S1913Vfs*9|1|0.32|ENSG00000186472|chr7:82955216-82955216|T/-|frameshift_variant;REV__PCLO|p.T3933Nfs*47|1|0.06|ENSG00000186472|chr7:82916188-82916189|-/T|frameshift_variant;REV__PCLO|p.T5069Qfs*20|1|0.11|ENSG00000186472|chr7:82760722-82760722|T/-|frameshift_variant;REV__PCLO|p.V1883Ffs*29|1|0.09|ENSG00000186472|chr7:82955307-82955307|T/-|frameshift_variant;REV__PCLO|p.Y3007Lfs*2|1|0.28|ENSG00000186472|chr7:82951935-82951936|-/A|frameshift_variant	98.58198989935565	0.04066992115528678	6				NaN	NaN	0	NaN	5343	2969	8308
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8315	24.201	NaN	16872	30	0	3441.3	0.144	+			35926	SEGFLASFLLL	11	67	399.5567199998609	1195.6483305997826	3	399.556884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SEGFLASFLLL_	ENST00000394670.8_1_17:30677220-30677292:+|nuORF	30.568863376406313	0.6691487505135859	6				NaN	NaN	0	NaN	5344	2969	8308
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8333	24.239	NaN	93283	30	0	36019	0.214				-1	 	0	63	334.20086854066375	999.5807762221913	3	334.2014465332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5359	2972	8332
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8334	24.243	NaN	117330	30	0	70396	0.106				-1	 	0	95	430.2654667258704	858.5163805185408	2	430.26593017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5360	2972	8332
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8335	24.245	NaN	78241	30	0	16575	0.106	+			38343	SRLEGWLSLP	10	106	386.54841785871395	1156.6234241763418	3	386.5487060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SRLEGWLSLP_	ENSG00000134318|ENST00000315872|ROCK2;ENST00000460262.1_1_2:11334380-11335170:-|nuORF;ROCK2|p.K1351Sfs*17|1|0.34|ENSG00000134318|chr2:11192259-11192259|T/-|frameshift_variant	42.86426827375447	0.522752283233888	6				NaN	NaN	0	NaN	5361	2972	8332
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8336	24.247	NaN	29711	30	0	11745	0.106				-1	 	0	60	328.1973367471119	981.5701808415356	3	328.19793701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5362	2972	8332
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8337	24.249	NaN	22954	30	0	2745.3	0.106	+			35780	SEAEAAKNAL	10	90	502.25579764217304	1002.4970423511461	2	502.25634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SEAEAAKNAL_	ENSG00000157110|ENST00000397323|RBPMS;nc|ENSG00000157110|Q93062-2|RBPMS;nc|ENSG00000157110|Q93062-3|RBPMS;nc|ENSG00000157110|Q93062-4|RBPMS;nc|ENSG00000157110|Q93062-5|RBPMS	112.10723106719422	0.0417416748461292	6				NaN	NaN	0	NaN	5363	2972	8332
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8338	24.25	NaN	15739	30	0	3458.5	0.034	+			47673	VSDQVQIK	8	73	458.7579705802262	915.5013882272524	2	458.7583923339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VSDQVQIK_	ENSG00000108588|ENST00000225726|CCDC47;nc|ENSG00000108588|Q96A33-2|CCDC47	66.42927471994793	0.4381325844043345	6				NaN	NaN	0	NaN	5364	2972	8332
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8339	24.251	NaN	26128	30	0	5345.3	0.138	+			12298	GCSLAPLAR	9	90	444.2410130932889	886.4674732533779	2	444.24176025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GCSLAPLAR_	ENST00000521689.5_1_8:98881135-98900426:+|nuORF	45.9519527083369	0.35044536499095585	6				NaN	NaN	0	NaN	5365	2972	8332
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8358	24.289	NaN	47426	30	0	9404.5	0.214	+			39862	STLNVGVNK	9	99	466.263272832661	930.511992732122	2	466.26361083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STLNVGVNK_	AGBL5|p.R813Gfs*68|1|0.4|ENSG00000084693|chr2:27069649-27069649|C/-|frameshift_variant;ENSG00000084693|ENST00000360131|AGBL5;nc|ENSG00000084693|Q8NDL9-2|AGBL5;nc|ENSG00000084693|Q8NDL9-3|AGBL5	199.70438780651162	3.456851077920069E-05	6				NaN	NaN	0	NaN	5381	2975	8357
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8359	24.292	NaN	117980	30	0	24562	0.106				-1	 	0	95	439.2524520761784	876.4903512191568	2	439.2528076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5382	2975	8357
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8360	24.294	NaN	30606	30	0	4467.4	0.106				-1	 	0	88	475.2448745762665	948.475196219333	2	475.2451477050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5383	2975	8357
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8361	24.296	NaN	14278	30	0	1917.7	0.106			+	38247	SQMWFREV	8	93	541.7585430550433	1081.5025331768866	2	541.7596435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SQMWFREV_	REV__ENSG00000070269|ENST00000261556|TMEM260;REV__ENST00000553335.5_1_14:57076000-57086109:+|nuORF;REV__nc|ENSG00000070269|Q9NX78-3|TMEM260	79.45101966838831	0.3281480470254892	6				NaN	NaN	0	NaN	5384	2975	8357
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8362	24.298	NaN	36071	30	0	3860.8	0.106	+			38208	SQFSGKITVK	10	91	547.8133554597271	1093.612157986254	2	547.8145141601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SQFSGKITVK_	ENSG00000075568|ENST00000186436|TMEM131;TMEM131|p.G555Wfs*10|1|0.32|ENSG00000075568|chr2:97812704-97812705|-/A|frameshift_variant;TMEM131|p.L1469Tfs*5|1|0.43|ENSG00000075568|chr2:97772340-97772341|-/T|frameshift_variant;TMEM131|p.L538Ffs*27|1|0.09|ENSG00000075568|chr2:97813974-97813975|-/A|frameshift_variant;TMEM131|p.N815Ifs*2|1|0.27|ENSG00000075568|chr2:97802749-97802749|T/-|frameshift_variant;TMEM131|p.N815Kfs*9|1|0.31|ENSG00000075568|chr2:97802748-97802749|-/T|frameshift_variant	155.3343571090843	0.0075483822650960816	6				NaN	NaN	0	NaN	5385	2975	8357
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8363	24.3	NaN	42887	30	0	29660	0.035				-1	 	0	80	490.7791994095166	979.5438458858332	2	490.77960205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5386	2975	8357
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8364	24.3	NaN	19705	30	0	3385.5	0.142	+			11975	FVNDDRHVM	9	74	566.7630342263157	1131.5115155194312	2	566.7640380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FVNDDRHVM_	ENSG00000129351|ENST00000588657|ILF3;ENST00000587928.5_1_19:10781281-10792148:+|nuORF;nc|ENSG00000129351|Q12906-2|ILF3;nc|ENSG00000129351|Q12906-3|ILF3;nc|ENSG00000129351|Q12906-4|ILF3;nc|ENSG00000129351|Q12906-5|ILF3;nc|ENSG00000129351|Q12906-6|ILF3;nc|ENSG00000129351|Q12906|ILF3	88.17693792209575	0.07000514020414955	6				NaN	NaN	0	NaN	5387	2975	8357
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8383	24.34	NaN	42729	30	0	6417.1	0.214	+			23260	KYISKPENL	9	82	546.3079071249821	1090.601261316764	2	546.30859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KYISKPENL_	ENSG00000102547|ENST00000409308|CAB39L;ENSG00000135932|ENST00000258418|CAB39;ENST00000493540.1_1_2:231678823-231682621:+|nuORF	148.98678547993487	0.0071052929883181565	6				NaN	NaN	0	NaN	5403	2978	8382
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8384	24.344	NaN	14723	30	0	2677.4	0.106	+			11015	FEKDVKGESL	10	81	384.5359875448494	1150.586133234748	3	384.5361633300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FEKDVKGESL_	ENSG00000119888|ENST00000263735|EPCAM	34.172542307311794	0.6007644933930345	6				NaN	NaN	0	NaN	5404	2978	8382
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8385	24.346	NaN	19919	30	0	4140.7	0.106				-1	VSKLPRTPRMC	11	73	454.24520281695845	1359.7137790510753	3	454.24749755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_VSKLPRTPRM(Oxidation (M))C(Carbamidomethyl (C))_	ENST00000425916.4_1_10:77167483-77167783:+|nuORF	34.08650109265054	0.6322515996262609	6				NaN	NaN	0	NaN	5405	2978	8382
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8386	24.348	NaN	11178	30	0	599.29	0.106	+			9708	EMKDTKIASL	10	76	576.3009754458461	1150.5873979584921	2	576.3015747070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_EM(Oxidation (M))KDTKIASL_	ENSG00000187672|ENST00000288221|ERC2;ERC2|p.D867Mfs*31|1|0.61|ENSG00000187672|chr3:55734885-55734885|T/-|frameshift_variant	84.81729255234993	0.1607459278640679	6				NaN	NaN	0	NaN	5406	2978	8382
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8387	24.349	NaN	28004	30	0	8319.9	0.106	+			26171	LSRENECLRKT	11	94	450.2386169104724	1347.6940213316173	3	450.23907470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSRENECLRKT_	ENSG00000133739|ENST00000360375|LRRCC1;LRRCC1|p.E880Rfs*15|1|0.15|ENSG00000133739|chr8:85138174-85138175|-/A|frameshift_variant;LRRCC1|p.T1013Nfs*7|2|0.2|ENSG00000133739|chr8:85145442-85145443|-/A|frameshift_variant;nc|ENSG00000133739|Q9C099-2|LRRCC1	37.59989570853033	0.5907838038483115	6				NaN	NaN	0	NaN	5407	2978	8382
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8388	24.351	NaN	25581	30	0	3665.8	0.037				-1	 	0	91	585.808630624191	1169.6027083151819	2	585.8094482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5408	2978	8382
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8389	24.352	NaN	28450	30	0	2210.5	0.147	+			43230	TEVLTIKNLVD	11	97	415.57465735050914	1243.7021426517274	3	415.5751037597656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TEVLTIKNLVD_	nc|ENSG00000126903|P09131-2|SLC10A3	70.41160668669231	0.23230827815249774	6				NaN	NaN	0	NaN	5409	2978	8382
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8407	24.39	NaN	72608	30	0	14221	0.214				-1	 	0	79	513.7581002874354	1025.5016476416706	2	513.7586669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5424	2981	8406
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8408	24.394	NaN	118210	30	0	29487	0.106	+			28205	NASRDQVVY	9	97	526.2612933472187	1050.5080337612374	2	526.2621459960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NASRDQVVY_	ENSG00000167608|ENST00000619895|TMC4;nc|ENSG00000167608|Q7Z404-1|TMC4;nc|ENSG00000167608|Q7Z404|TMC4;TMC4|p.F240Lfs*221|1|0.42|ENSG00000167608|chr19:54168267-54168268|AA/-|frameshift_variant;TMC4|p.Q383Rfs*6|1|0.37|ENSG00000167608|chr19:54163872-54163872|G/-|frameshift_variant	88.17693792209575	0.07000514020414955	6				NaN	NaN	0	NaN	5425	2981	8406
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8409	24.396	NaN	23845	30	0	2576.3	0.106			+	33594	RLNLFDCH	8	99	509.24972908874736	1016.4849052442947	2	509.25048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RLNLFDCH_	REV__ENSG00000180096|ENST00000321367|SEPTIN1	44.116797842482775	0.6307669463330267	6				NaN	NaN	0	NaN	5426	2981	8406
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8410	24.398	NaN	37364	30	0	8544.5	0.106				-1	 	0	83	520.2375897994135	1038.460626665627	2	520.2383422851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5427	2981	8406
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8411	24.4	NaN	7109	30	0	920.51	0.106	+			19858	KEEIVHQL	8	76	498.27837837282783	994.5422038124557	2	498.2795104980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEEIVHQL_	ENSG00000085231|ENST00000380822|AK6;nc|ENSG00000085231|Q9Y3D8-2|AK6	96.19043198914106	0.25873003980794995	6				NaN	NaN	0	NaN	5428	2981	8406
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8412	24.401	NaN	18239	30	0	5230.9	0.033				-1	 	0	69	436.7631125258222	871.5116721184444	2	436.76348876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5429	2981	8406
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8413	24.402	NaN	16723	30	0	2425.5	0.139	+			20711	KGRRRLGQ	8	86	485.8052623209067	969.5959717086134	2	485.805419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KGRRRLGQ_	ENST00000562407.1_1_16:23695226-23699079:+|nuORF	63.30626980617807	0.4690498839812213	6				NaN	NaN	0	NaN	5430	2981	8406
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8432	24.44	NaN	42591	30	0	7988.7	0.203	+			11464	FNKTEDDII	9	68	365.5170146295927	1093.5292144889781	3	365.5173645019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FNKTEDDII_	ENSG00000065615|ENST00000369681|CYB5R4	31.954861631926434	0.5046124803899898	6				NaN	NaN	0	NaN	5446	2984	8431
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8433	24.444	NaN	48400	30	0	5082.7	0.106				-1	 	0	104	465.7894990592092	929.5644451852185	2	465.78985595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5447	2984	8431
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8434	24.446	NaN	17695	30	0	2533.4	0.106	+			42234	TAALAHTSY	9	77	467.7347272296268	933.4549015260536	2	467.7347717285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TAALAHTSY_	ENSG00000205277|ENST00000536621|MUC12;nc|ENSG00000205277|Q9UKN1|MUC12	122.1759843771914	0.019882474861609503	6				NaN	NaN	0	NaN	5448	2984	8431
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8435	24.447	NaN	31310	30	0	7698.2	0.106	+			41968	SVWHGTLSK	9	99	507.7713511819411	1013.5281494306822	2	507.77197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVWHGTLSK_	ENSG00000136270|ENST00000258770|TBRG4;nc|ENSG00000136270|Q969Z0-2|TBRG4;TBRG4|p.L492Cfs*9|2|0.32|ENSG00000136270|chr7:45101918-45101918|G/-|frameshift_variant	117.81106730687013	0.02252488733980868	6				NaN	NaN	0	NaN	5449	2984	8431
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8436	24.449	NaN	21803	30	0	4672.3	0.106	+			19443	KAQVYYRA	8	72	499.7757673645908	997.5369817959817	2	499.7760009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KAQVYYRA_	ENSG00000117298|ENST00000374893|ECE1;ENST00000526194.5_1_1:21560049-21616919:-|nuORF;nc|ENSG00000117298|P42892-2|ECE1;nc|ENSG00000117298|P42892-3|ECE1;nc|ENSG00000117298|P42892-4|ECE1	31.954861631926434	0.7126016770032289	6				NaN	NaN	0	NaN	5450	2984	8431
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8437	24.451	NaN	25547	30	0	3311.5	0.035				-1	 	0	90	502.7735457147933	1003.5325384963866	2	502.7742004394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5451	2984	8431
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8438	24.452	NaN	11458	30	0	2770.2	0.144	+			39187	SSYREAVFK	9	62	362.8570440445866	1085.5493027339598	3	362.857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSYREAVFK_	ENSG00000138629|ENST00000395081|UBL7	37.81151784470057	0.4459294069877048	6				NaN	NaN	0	NaN	5452	2984	8431
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8456	24.49	NaN	68249	30	0	14455	0.185	+			3601	ASVNTLVNK	9	99	473.2712154918657	944.5278780505314	2	473.2716369628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASVNTLVNK_	ARFIP1|p.K303Nfs*13|1|0.22|ENSG00000164144|chr4:152888246-152888246|A/-|frameshift_variant;ENSG00000164144|ENST00000353617|ARFIP1;nc|ENSG00000164144|P53367-2|ARFIP1;nc|ENSG00000164144|P53367-3|ARFIP1	172.24860141594272	0.002383092361811508	6				NaN	NaN	0	NaN	5467	2987	8455
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8457	24.493	NaN	266930	30	0	55433	0.106	+			45175	TVMDKTRAL	9	121	517.7857564485897	1033.5569599639794	2	517.7869873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVMDKTRAL_	CARD17-CASP1|1|fusion;CARD17-CASP1|2|fusion;CASP1|p.N205Ifs*7|1|0.4|ENSG00000137752|chr11:105030343-105030343|T/-|frameshift_variant;ENSG00000137752|ENST00000533400|CASP1;ENSG00000204397|ENST00000673097|CARD16;ENST00000526511.5_1_11:104901858-104905840:-|nuORF;ENST00000527065.1_1_11:104915107-104915377:-|nuORF;nc|ENSG00000137752|P29466-2|CASP1;nc|ENSG00000204397|Q5EG05|CARD16	120.30596017624542	0.02101454110788768	6				NaN	NaN	0	NaN	5468	2987	8455
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8458	24.495	NaN	18183	30	0	2729.4	0.106				-1	 	0	69	398.7736062562057	795.5326595792114	2	398.7738037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5469	2987	8455
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8459	24.497	NaN	53114	30	0	10363	0.106	+			14881	GTLPHPLQR	9	97	509.79268252555045	1017.5708121179009	2	509.7933349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTLPHPLQR_	ENSG00000111319|ENST00000228916|SCNN1A;ENST00000540037.5_2_12:6464995-6472854:-|nuORF;nc|ENSG00000111319|P37088-2|SCNN1A;nc|ENSG00000111319|P37088-3|SCNN1A;nc|ENSG00000111319|P37088-4|SCNN1A;nc|ENSG00000111319|P37088-5|SCNN1A;nc|ENSG00000111319|P37088-6|SCNN1A	93.19546047674547	0.05585629608842056	6				NaN	NaN	0	NaN	5470	2987	8455
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8460	24.499	NaN	59988	30	0	20539	0.106	+			4527	ATKRRKKSGDL	11	94	420.58982219216347	1258.7476371766904	3	420.5903625488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATKRRKKSGDL_	ENSG00000178974|ENST00000313833|FBXO34;FBXO34|p.L485Cfs*13|1|0.39|ENSG00000178974|chr14:55351837-55351837|T/-|frameshift_variant	41.080066990542036	0.5431644350485484	6				NaN	NaN	0	NaN	5471	2987	8455
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8461	24.501	NaN	8046.9	30	0	999.79	0.106	+			16195	HEAQIQEM	8	65	493.2233276770346	984.4321024208692	2	493.22393798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HEAQIQEM_	ENSG00000100345|ENST00000216181|MYH9;SYNDIG1-MYH9|1|fusion	44.377184641726394	0.6291511924298419	6				NaN	NaN	0	NaN	5472	2987	8455
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8462	24.503	NaN	20874	30	0	2632.4	0.033				-1	 	0	80	428.2679381917417	854.5213234502834	2	428.2684326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5473	2987	8455
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8482	24.54	NaN	9766.1	30	0	1056.7	0.214	+			20618	KGEITSNLK	9	80	495.28391280440803	988.5532726756161	2	495.28448486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KGEITSNLK_	tr|U7T2J8|U7T2J8_FUSNUinorganicdiphosphataseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00474PE=4SV=1	70.8162118820467	0.13725933411854815	6				NaN	NaN	0	NaN	5490	2990	8481
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8483	24.544	NaN	5825	30	0	1845.8	0.106	+			40795	SVDRVISHDRD	11	53	433.5534329104829	1297.6384693316488	3	433.5536193847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVDRVISHDRD_	ENSG00000164944|ENST00000297591|VIRMA;nc|ENSG00000164944|Q69YN4-2|VIRMA;nc|ENSG00000164944|Q69YN4-3|VIRMA;nc|ENSG00000164944|Q69YN4-4|VIRMA	34.08650109265054	0.6322515996262609	6				NaN	NaN	0	NaN	5491	2990	8481
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8484	24.546	NaN	11184	30	0	824.05	0.106	+			42633	TAVEAGRAL	9	78	444.2493746232605	886.484196313321	2	444.2496643066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TAVEAGRAL_	ENSG00000032444|ENST00000600737|PNPLA6;nc|ENSG00000032444|Q8IY17-2|PNPLA6;nc|ENSG00000032444|Q8IY17-3|PNPLA6;nc|ENSG00000032444|Q8IY17-5|PNPLA6;nc|ENSG00000032444|Q8IY17|PNPLA6;PNPLA6|p.S1175Pfs*10|1|0.55|ENSG00000032444|chr19:7558944-7558944|G/-|frameshift_variant	56.43379154798735	0.2433427591689151	6				NaN	NaN	0	NaN	5492	2990	8481
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8485	24.548	NaN	8686.3	30	0	2166	0.106			+	31851	QPTQPSMTPT	10	78	544.2563126642259	1086.4980723952517	2	544.2565307617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QPTQPSMTPT_	REV__ENSG00000071054|ENST00000324219|MAP4K4;REV__MAP4K4|p.G1177Efs*5|1|0.19|ENSG00000071054|chr2:101888826-101888826|G/-|frameshift_variant;REV__nc|ENSG00000071054|O95819-6|MAP4K4	52.936696900407355	0.4300801048568001	6				NaN	NaN	0	NaN	5493	2990	8481
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8486	24.55	NaN	6298.8	30	0	1168.5	0.106	+			8259	EAGGVRGRR	9	72	479.2708929747508	956.5272330163016	2	479.27130126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EAGGVRGRR_	ENST00000376785.2_1_6:30029124-30029697:+|nuORF	35.61828744233558	0.47037581924408073	6				NaN	NaN	0	NaN	5494	2990	8481
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8487	24.551	NaN	8783.9	30	0	2936.8	0.037	+			37961	SPGGDRRRRP	10	77	577.3190070328741	1152.623461132548	2	577.31982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SPGGDRRRRP_	ENST00000286523.9_2_14:74206798-74226821:-|nuORF	52.167168403610894	0.437078873413402	6				NaN	NaN	0	NaN	5495	2990	8481
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8488	24.552	NaN	12768	30	0	1379.5	0.141	+			9806	EPEEAREEI	9	76	551.2560519958196	1100.497551058439	2	551.2568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EPEEAREEI_	ENSG00000116580|ENST00000368331|GON4L;GON4L|p.E1831Rfs*8|1|0.18|ENSG00000116580|chr1:155756984-155756985|-/T|frameshift_variant;nc|ENSG00000116580|Q3T8J9-2|GON4L;nc|ENSG00000116580|Q3T8J9-3|GON4L	65.46538089061403	0.16805504838372562	6				NaN	NaN	0	NaN	5496	2990	8481
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8501	24.589	NaN	21923	30	0	3143.3	0.214	+			33538	RLCENIAGHLK	11	80	437.57078270094155	1309.6905187030247	3	437.57122802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_RLC(Carbamidomethyl (C))ENIAGHLK_	ENSG00000121691|ENST00000241052|CAT;ENST00000525707.1_1_11:34482779-34490041:+|nuORF	100.81924332030881	0.058993442163212936	6				NaN	NaN	0	NaN	5506	2993	8500
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8502	24.592	NaN	19130	30	0	2263.6	0.106	+			2942	ASDPHIIIK	9	84	497.2894039853032	992.5642550374064	2	497.28997802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASDPHIIIK_	ENSG00000134313|ENST00000256707|KIDINS220;ENST00000488729.5_1_2:8870852-8965899:-|nuORF;KIDINS220|p.K1581Rfs*8|1|0.28|ENSG00000134313|chr2:8731294-8731294|T/-|frameshift_variant;KIDINS220|p.P1081Rfs*48|1|0.22|ENSG00000134313|chr2:8750284-8750284|G/-|frameshift_variant;KIDINS220|p.R1551Efs*38|1|0.08|ENSG00000134313|chr2:8731386-8731386|C/-|frameshift_variant;nc|ENSG00000134313|Q9ULH0-2|KIDINS220;nc|ENSG00000134313|Q9ULH0-3|KIDINS220;nc|ENSG00000134313|Q9ULH0-4|KIDINS220	85.16082228582465	0.07850854922700509	6				NaN	NaN	0	NaN	5507	2993	8500
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8503	24.594	NaN	6759.5	30	0	776.94	0.106	+			12624	GEIDKRVEV	9	76	522.7872162431026	1043.5598795530052	2	522.7880249023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEIDKRVEV_	ENSG00000113742|ENST00000265085|CPEB4;nc|ENSG00000113742|Q17RY0-2|CPEB4;nc|ENSG00000113742|Q17RY0-3|CPEB4	104.01359247289065	0.03510646158778409	6				NaN	NaN	0	NaN	5508	2993	8500
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8504	24.596	NaN	16642	30	0	5760.7	0.106			+	37638	SLQKPSKNY	9	80	532.789815374678	1063.565077816156	2	533.79296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLQKPSKNY_	REV__ENSG00000213096|ENST00000357002|ZNF254;REV__nc|ENSG00000213096|O75437-2|ZNF254	60.97194046774394	0.20551255781574032	6				NaN	NaN	0	NaN	5509	2993	8500
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8505	24.598	NaN	7044	30	0	2911.8	0.106	+			22809	KVFKQIFSK	9	66	375.5654371535125	1123.6744820607375	3	375.56561279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KVFKQIFSK_	ENSG00000116906|ENST00000366647|GNPAT;nc|ENSG00000116906|O15228-2|GNPAT	70.8162118820467	0.13725933411854815	6				NaN	NaN	0	NaN	5510	2993	8500
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8506	24.6	NaN	2507	30	0	1478.1	0.03				-1	 	0	41	322.19307335132197	642.371593769444	2	322.193603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5511	2993	8500
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8507	24.6	NaN	8244.3	30	0	2619.7	0.145			+	548	ADEVRKKMDPH	11	68	442.557717323507	1324.651322570721	3	442.557861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ADEVRKKMDPH_	REV__CCT6A|p.I274*|1|0.21|ENSG00000146731|chr7:56058450-56058450|A/-|frameshift_variant;REV__CCT6A|p.Y250Tfs*11|2|0.27|ENSG00000146731|chr7:56058378-56058378|T/-|frameshift_variant;REV__CCT6B|p.I274*|1|0.1|ENSG00000132141|chr17:34942549-34942549|T/-|frameshift_variant;REV__ENSG00000132141|ENST00000314144|CCT6B;REV__ENSG00000146731|ENST00000275603|CCT6A;REV__ENST00000482776.1_1_7:56124009-56126486:+|nuORF;REV__ENST00000577307.1_1_17:33269786-33269990:-|nuORF;REV__nc|ENSG00000132141|Q92526-2|CCT6B;REV__nc|ENSG00000146731|P40227-2|CCT6A	27.64392233501311	0.6998289966465058	6				NaN	NaN	0	NaN	5512	2993	8500
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8524	24.638	NaN	56634	30	0	12706	0.214	+			45097	TVIHFNNPK	9	104	535.2922109189058	1068.5698689046114	2	535.2935791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVIHFNNPK_	ENSG00000134717|ENST00000313334|BTF3L4;ENSG00000145741|ENST00000380591|BTF3;ENST00000418879.1_1_6:137865036-137865375:-|nuORF;nc|ENSG00000134717|Q96K17-2|BTF3L4;nc|ENSG00000145741|P20290-2|BTF3	120.30596017624542	0.02101454110788768	6				NaN	NaN	0	NaN	5526	2996	8523
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8525	24.642	NaN	50545	30	0	4223.7	0.106				-1	 	0	111	474.7604233667673	947.5062938003347	2	474.7607116699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5527	2996	8523
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8526	24.644	NaN	12694	30	0	1580	0.106	+			20864	KIMKDILEK	9	83	559.3352591651792	1116.6559653971583	2	559.3363037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KIMKDILEK_	ENSG00000080824|ENST00000216281|HSP90AA1;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1	133.9934435666947	0.013297982075521412	6				NaN	NaN	0	NaN	5528	2996	8523
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8527	24.646	NaN	13921	30	0	1721.5	0.106	+			23939	LDQHSLIPA	9	78	497.2711848397734	992.5278167463468	2	497.2716064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LDQHSLIPA_	ENSG00000163738|ENST00000325278|MTHFD2L;nc|ENSG00000163738|Q9H903-1|MTHFD2L;nc|ENSG00000163738|Q9H903-3|MTHFD2L;nc|ENSG00000163738|Q9H903-5|MTHFD2L	71.29570347882199	0.13518600952103718	6				NaN	NaN	0	NaN	5529	2996	8523
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8528	24.648	NaN	10546	30	0	1691.8	0.106	+			33019	REIAQDFKT	9	79	554.2924442460308	1106.5703355588614	2	554.2938232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_REIAQDFKT_	ENSG00000132475|ENST00000254810|H3-3B;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000168148|ENST00000366696|H3-4;ENSG00000183598|ENST00000331491|H3C13;ENSG00000197153|ENST00000359303|H3C12;ENSG00000197409|ENST00000356476|H3C4;ENSG00000203811|ENST00000369158|H3C14;ENSG00000203852|ENST00000403683|H3C15;ENSG00000273983|ENST00000614378|H3C8;ENSG00000274750|ENST00000614911|H3C6;ENSG00000275379|ENST00000616365|H3C11;ENSG00000275714|ENST00000613854|H3C1;ENSG00000277775|ENST00000618052|H3C7;ENSG00000278828|ENST00000685041|H3C10;ENST00000401004.2_1:120904811-120905087:+|nuORF;ENST00000586518.1_1_17:73774674-73775034:-|nuORF;ENST00000593254.1_1_17:73774678-73775846:-|nuORF	83.6470233535746	0.08277643980271215	6				NaN	NaN	0	NaN	5530	2996	8523
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8529	24.649	NaN	10456	30	0	1563.5	0.034	+			50148	WKACLLLI	8	75	480.29165383233317	958.5687547314664	2	480.2921447753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_WKACLLLI_	ENST00000562968.1_1_16:27356608-27356716:+|nuORF	77.94384346573518	0.3407065481025094	6				NaN	NaN	0	NaN	5531	2996	8523
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8530	24.65	NaN	3236.3	30	0	1024.8	0.142	+			11344	FLEQPSGLEQ	10	68	574.2846156852615	1146.554678437323	2	574.28564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FLEQPSGLEQ_	SCARF2|p.P530Q|1|0.11|ENSG00000244486|chr22:20427502-20427502|G/T|missense_variant	49.536043120802724	0.461275219792494	6				NaN	NaN	0	NaN	5532	2996	8523
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8546	24.686	NaN	42365	30	0	15717	0.214	+			39971	STMGYMMAKK	10	99	383.1813127757614	1146.5221089274842	3	383.1818542480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STMGYMMAKK_	ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;ENST00000518337.1_1_8:74128289-74128592:-|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P	45.97224482568171	0.49411383603842696	6				NaN	NaN	0	NaN	5545	2999	8545
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8547	24.689	NaN	32274	30	0	3332.6	0.106	+			27849	MTGNVVASI	9	100	454.23201554202745	906.4494781508549	2	454.233642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_M(Oxidation (M))TGNVVASI_	ENSG00000135298|ENST00000370598|ADGRB3	98.62937762414208	0.04060045538121712	6				NaN	NaN	0	NaN	5546	2999	8545
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8548	24.691	NaN	34404	30	0	12124	0.106				-1	 	0	66	447.92038676747035	1340.739330902611	3	447.92083740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5547	2999	8545
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8549	24.693	NaN	126740	30	0	51838	0.106	+			49640	VYIEKNDKL	9	108	374.5445280115098	1120.6117546347293	3	374.54486083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VYIEKNDKL_	ENSG00000065361|ENST00000267101|ERBB3;ENST00000546884.1_1_12:56474084-56480451:+|nuORF;ENST00000549472.1_1_12:56480319-56481575:+|nuORF;ERBB3|p.A805Gfs*22|1|0.1|ENSG00000065361|chr12:56097177-56097178|-/G|frameshift_variant;ERBB3|p.A805Hfs*95|1|0.33|ENSG00000065361|chr12:56097178-56097178|G/-|frameshift_variant;ERBB3|p.R1080Vfs*22|1|0.14|ENSG00000065361|chr12:56101093-56101093|C/-|frameshift_variant;nc|ENSG00000065361|P21860-3|ERBB3;nc|ENSG00000065361|P21860-4|ERBB3	93.19546047674547	0.05585629608842056	6				NaN	NaN	0	NaN	5548	2999	8545
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8550	24.695	NaN	19144	30	0	4797.6	0.106	+			41779	SVSPGLYSK	9	67	469.25273750722437	936.4909220812488	2	469.2529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVSPGLYSK_	ENSG00000101311|ENST00000217289|FERMT1;nc|ENSG00000101311|Q9BQL6-2|FERMT1;nc|ENSG00000101311|Q9BQL6-4|FERMT1	77.31757898189308	0.1091473830098891	6				NaN	NaN	0	NaN	5549	2999	8545
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8551	24.697	NaN	10342	30	0	1471.2	0.035	+			47327	VPAEHQVAM	9	70	491.2441667490394	980.4737805648788	2	491.2446594238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VPAEHQVAM_	ENSG00000196943|ENST00000267425|NOP9;nc|ENSG00000196943|Q86U38-2|NOP9	82.24051045832904	0.08786059719216216	6				NaN	NaN	0	NaN	5550	2999	8545
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8569	24.733	NaN	35321	30	0	5310.4	0.214	+			10737	FAEDGARTV	9	75	483.23734257407574	NaN	0	483.2375793457031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FAEDGARTV_	ENSG00000157240|ENST00000287934|FZD1	101.45984612302182	0.018494728971010316	6				NaN	NaN	0	NaN	5565	3002	8568
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8570	24.736	NaN	32507	30	0	9676.2	0.106				-1	 	0	93	605.8295378103161	1209.644522687432	2	605.83056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5566	3002	8568
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8571	24.738	NaN	29016	30	0	6197.8	0.106	+			6054	AVMGNPVTR	9	89	472.75273524605194	NaN	0	472.7525634765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVMGNPVTR_	ENSG00000136021|ENST00000360820|SCYL2	79.71258880314673	0.07236858429579222	6				NaN	NaN	0	NaN	5567	3002	8568
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8572	24.74	NaN	12247	30	0	2257.1	0.106	+			1378	AEVKERVTL	9	74	522.8054549901915	1043.596357047183	2	522.8063354492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEVKERVTL_	EIF2B5|p.L605Pfs*9|1|0.26|ENSG00000145191|chr3:184143504-184143505|-/C|frameshift_variant;ENSG00000145191|ENST00000648915|EIF2B5;ENST00000491144.5_1_3:183857994-183862728:+|nuORF;ENST00000492773.5_1_3:183859720-183860594:+|nuORF	80.45461616416974	0.09558281504443908	6				NaN	NaN	0	NaN	5568	3002	8568
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8573	24.742	NaN	16052	30	0	3917.5	0.106				-1	 	0	61	364.86055771170106	1091.5598437353033	3	364.86090087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5569	3002	8568
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8574	24.744	NaN	19757	30	0	2505.5	0.035	+			49348	VVSPVCRPAA	10	76	499.7757673645908	997.5369817959817	2	500.2817687988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VVSPVCRPAA_	ENSG00000030304|ENST00000374448|MUSK	40.77816245573522	0.5419747034533848	6				NaN	NaN	0	NaN	5570	3002	8568
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8575	24.744	NaN	5540.9	30	0	1238.2	0.144			+	24676	LGWACLRLL	9	55	348.87255079524846	1043.5958229859455	3	348.873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LGWACLRLL_	REV__ENSG00000009830|ENST00000261534|POMT2	26.79610172149135	0.5528238334041078	6				NaN	NaN	0	NaN	5571	3002	8568
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8592	24.781	NaN	26889	30	0	2519.2	0.214				-1	GVNRFCLSK	9	89	540.7841890494361	1079.5538251656722	2	540.7860717773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GVNRFC(Carbamidomethyl (C))LSK_	ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;nc|ENSG00000185164|Q5JPE7-3|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2;NOMO1|p.P1102Hfs*42|1|0.36|ENSG00000103512|chr16:14886838-14886838|C/-|frameshift_variant	72.87924865735499	0.12833875048249987	6				NaN	NaN	0	NaN	5585	3005	8591
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8593	24.784	NaN	23686	30	0	7865.5	0.106	+			15708	GVNRFCLSK	9	67	360.8581277221939	1079.5525537667818	3	360.85870361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GVNRFC(Carbamidomethyl (C))LSK_	ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;nc|ENSG00000185164|Q5JPE7-3|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2;NOMO1|p.P1102Hfs*42|1|0.36|ENSG00000103512|chr16:14886838-14886838|C/-|frameshift_variant	80.45461616416974	0.09558281504443908	6				NaN	NaN	0	NaN	5586	3005	8591
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8594	24.786	NaN	18188	30	0	4533.7	0.106			+	30983	QERGRDWGGQ	10	75	594.7794207750344	1187.5442886168687	2	594.7803955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QERGRDWGGQ_	REV__ENST00000572135.5_1_17:1488956-1531469:-|nuORF;REV__nc|ENSG00000167703|Q8N370-2|SLC43A2	46.45678178249821	0.4896490706773647	6				NaN	NaN	0	NaN	5587	3005	8591
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8595	24.788	NaN	12406	30	0	1043.4	0.106	+			36259	SENKAQVSL	9	94	488.25732273579507	974.5000925383902	2	488.2586364746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SENKAQVSL_	ENSG00000152818|ENST00000367545|UTRN;nc|ENSG00000152818|P46939-2|UTRN;UTRN|p.G3160*|1|0.03|ENSG00000152818|chr6:144821001-144821002|AG/-|frameshift_variant;UTRN|p.K1847Ffs*66|1|0.07|ENSG00000152818|chr6:144516945-144516946|-/TTTAA|frameshift_variant;UTRN|p.K951Rfs*32|2|0.22|ENSG00000152818|chr6:144461335-144461335|A/-|frameshift_variant;UTRN|p.L985Wfs*4|1|0.07|ENSG00000152818|chr6:144462753-144462754|-/GGGC|frameshift_variant;UTRN|p.R3003Pfs*5|1|0.27|ENSG00000152818|chr6:144793915-144793916|-/C|frameshift_variant;UTRN|p.T2422Hfs*35|1|0.47|ENSG00000152818|chr6:144557282-144557282|A/-|frameshift_variant	81.52500206392136	0.09095445986635249	6				NaN	NaN	0	NaN	5588	3005	8591
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8596	24.79	NaN	25723	30	0	6244.7	0.106				-1	 	0	73	345.8653690563418	1034.5742777692255	3	345.86590576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5589	3005	8591
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8597	24.792	NaN	11640	30	0	1027.6	0.036	+			37937	SPEELARKY	9	85	546.7878605691326	1091.561168205065	2	546.7880249023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SPEELARKY_	ENSG00000002726|ENST00000360937|AOC1;nc|ENSG00000002726|P19801-2|AOC1	91.26522074875469	0.06129826844580791	6				NaN	NaN	0	NaN	5590	3005	8591
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8598	24.792	NaN	15983	30	0	5920.7	0.145	+			23234	KYIDKTIRV	9	67	379.2326017619774	NaN	0	379.2325439453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KYIDKTIRV_	ENSG00000130332|ENST00000252622|LSM7;ENST00000591745.1_1_19:2328269-2328565:-|nuORF	43.650786325866115	0.2504488100985368	6				NaN	NaN	0	NaN	5591	3005	8591
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8616	24.831	NaN	85171	30	0	18621	0.099			+	28970	NSGGIVYLKN	10	95	532.789815374678	1063.565077816156	2	532.79052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NSGGIVYLKN_	REV__ENSG00000099910|ENST00000328879|KLHL22;REV__nc|ENSG00000099910|Q53GT1-3|KLHL22	115.49404669440601	0.03369372856552391	6				NaN	NaN	0	NaN	5606	3008	8615
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8617	24.832	NaN	65053	30	0	11099	0.1	+			42553	TASAVVQHM	9	89	472.236154601785	942.45775627037	2	472.2366638183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TASAVVQHM_	ENSG00000115524|ENST00000335508|SF3B1	118.74307786436346	0.02196067127630568	6				NaN	NaN	0	NaN	5607	3008	8615
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8618	24.834	NaN	33924	30	0	4396.6	0.102	+			41728	SVSEVVVNR	9	86	494.7742510684084	987.5339492036168	2	494.7745056152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVSEVVVNR_	ENSG00000099821|ENST00000588649|POLRMT;ENST00000578759.1_1_17:60217316-60217976:-|nuORF	176.08678752253132	0.0017279326439731339	6				NaN	NaN	0	NaN	5608	3008	8615
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8619	24.836	NaN	81766	30	0	27409	0.106	+			9594	ELKYDKQIDL	10	110	422.23018555207346	1263.6687272564204	3	422.2308044433594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ELKYDKQIDL_	ENSG00000145050|ENST00000528157|MANF;ENST00000446668.5_1_3:51424348-51426517:+|nuORF;ENST00000470900.1_1_3:51423580-51426517:+|nuORF;ENST00000482262.1_1_3:51425158-51426517:+|nuORF;MANF|p.E149Rfs*16|1|0.3|ENSG00000145050|chr3:51388980-51388980|G/-|frameshift_variant	90.14881205920913	0.1302219035121668	6				NaN	NaN	0	NaN	5609	3008	8615
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8620	24.838	NaN	15269	30	0	5519.9	0.106			+	-1	LTVKGMMNQL	10	73	389.5360432360424	1165.5863003083273	3	389.5361022949219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Oxidation (M)	_LTVKGM(Oxidation (M))M(Oxidation (M))NQL_	REV__tr|U7SVU6|U7SVU6_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01344PE=4SV=1	56.43379154798735	0.3982744522255666	6				NaN	NaN	0	NaN	5610	3008	8615
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8621	24.84	NaN	26488	30	0	5225.5	0.106				-1	 	0	75	454.2472024556729	906.4798519781458	2	454.2475280761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5611	3008	8615
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8622	24.842	NaN	32599	30	0	13643	0.033				-1	 	0	70	435.2450689575236	868.4755849818472	2	435.2455139160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5612	3008	8615
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8623	24.842	NaN	25512	30	0	9002.3	0.142	+			46665	VGFLEIKAR	9	79	344.8786357384637	1031.6140778155911	3	344.8792724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_VGFLEIKAR_	COL4A6|p.G611Afs*127|1|0.46|ENSG00000197565|chrX:108187220-108187220|T/-|frameshift_variant	26.69291269510374	0.5537881896960711	6				NaN	NaN	0	NaN	5613	3008	8615
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8639	24.878	NaN	48131	30	0	3881.3	0.214	+			25669	LRDLSNGSEED	11	118	412.18926106712377	1233.5459538015714	3	412.19000244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LRDLSNGSEED_	ENSG00000138182|ENST00000371728|KIF20B;KIF20B|p.N1214Tfs*5|1|0.15|ENSG00000138182|chr10:89738478-89738478|A/-|frameshift_variant;KIF20B|p.R1552Gfs*9|1|0.39|ENSG00000138182|chr10:89758852-89758852|A/-|frameshift_variant;nc|ENSG00000138182|Q96Q89-2|KIF20B;nc|ENSG00000138182|Q96Q89-3|KIF20B;nc|ENSG00000138182|Q96Q89-4|KIF20B	68.84614121027924	0.24535906747804975	6				NaN	NaN	0	NaN	5626	3011	8638
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8640	24.882	NaN	70310	30	0	17967	0.106			+	11735	FSGARAVT	8	101	404.7191982117156	NaN	0	404.7191467285156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FSGARAVT_	REV__ENST00000372236.8_1_6:43543965-43544034:+|nuORF	76.7741389293348	1.7418937515398478	6				NaN	NaN	0	NaN	5627	3011	8638
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8641	24.884	NaN	19916	30	0	3841.3	0.106	+			21456	KNFVTDDY	8	80	501.23233015078296	1000.4501073683659	2	501.23291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KNFVTDDY_	tr|U7SWN9|U7SWN9_FUSNUOutermembranelipoproteinBamD-likedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01116PE=4SV=1	47.91560031466742	0.6071945918984287	6				NaN	NaN	0	NaN	5628	3011	8638
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8642	24.886	NaN	26969	30	0	2805.7	0.106	+			34309	RTLSDYNIQK	10	90	619.3298720797312	1236.6451912262623	2	619.3305053710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RTLSDYNIQK_	ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000392399.3_1_2:137087013-137087097:-|nuORF;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000597285.1_1_19:7730614-7730836:+|nuORF;UBB|p.D191Tfs*35|2|0.18|ENSG00000170315|chr17:16382471-16382471|C/-|frameshift_variant;UBB|p.D191Tfs*35|2|0.18|ENSG00000170315|chr17:16382471-16382471|C/-|frameshift_variant	105.16503226865211	0.06235809640390954	6				NaN	NaN	0	NaN	5629	3011	8638
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8643	24.888	NaN	42765	30	0	11791	0.106				-1	 	0	98	482.757921226299	963.501289519398	2	482.75823974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5630	3011	8638
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8644	24.889	NaN	14168	30	0	3784.1	0.033				-1	 	0	76	430.7084998708468	859.4024468084937	2	430.7088623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5631	3011	8638
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8660	24.923	NaN	138030	30	0	37914	0.199	+			16046	HAVGPSTSL	9	90	434.72917292419436	867.4437929151887	2	434.7296447753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HAVGPSTSL_	ENSG00000140262|ENST00000333725|TCF12;nc|ENSG00000140262|Q99081-2|TCF12;nc|ENSG00000140262|Q99081-4|TCF12;nc|ENSG00000140262|Q99081|TCF12;TCF12|p.D536Afs*2|1|0.04|ENSG00000140262|chr15:57263207-57263208|-/C|frameshift_variant;TCF12|p.V474Mfs*18|1|0.15|ENSG00000140262|chr15:57262114-57262123|CTCTGTCAGT/-|frameshift_variant	115.45897859103373	0.02394878348088707	6				NaN	NaN	0	NaN	5644	3014	8659
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8661	24.926	NaN	27901	30	0	1569.6	0.106	+			1901	AINSQKAVL	9	103	472.28178061476586	942.5490082963317	2	472.2818908691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AINSQKAVL_	ENSG00000135365|ENST00000676320|PHF21A;ENST00000527401.5_1_11:45992606-45992897:-|nuORF;nc|ENSG00000135365|Q96BD5-2|PHF21A;nc|ENSG00000135365|Q96BD5|PHF21A;PHF21A|p.N200Tfs*67|2|0.23|ENSG00000135365|chr11:45971129-45971129|T/-|frameshift_variant;PHF21A|p.S665Lfs*10|1|0.08|ENSG00000135365|chr11:45934018-45934019|-/G|frameshift_variant	51.19269402634007	0.2889735674168909	6				NaN	NaN	0	NaN	5645	3014	8659
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8662	24.929	NaN	84423	30	0	24722	0.106	+			39943	STMGYMAAK	9	97	480.2190650662156	958.4235771992312	2	480.2195129394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STMGYMAAK_	ENSG00000080824|ENST00000216281|HSP90AA1;ENST00000436135.1_1_1:158495283-158495625:+|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1	166.67852932204877	0.003333876602083393	6				NaN	NaN	0	NaN	5646	3014	8659
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8663	24.93	NaN	27908	30	0	2317.1	0.106	+			2820	ASAAASGGLLK	11	102	473.27161231853245	944.5286717038649	2	473.2713928222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASAAASGGLLK_	ENSG00000175073|ENST00000310421|VCPIP1;VCPIP1|p.A460Qfs*2|1|0.36|ENSG00000175073|chr8:66665582-66665582|T/-|frameshift_variant;VCPIP1|p.K1108Nfs*37|1|0.15|ENSG00000175073|chr8:66634846-66634846|T/-|frameshift_variant	139.38205640894643	0.0005577063719173977	6				NaN	NaN	0	NaN	5647	3014	8659
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8664	24.932	NaN	22998	30	0	3080.7	0.106				-1	MEMPLLLQ	8	92	495.7531026254146	989.4916523176292	2	495.75384521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_MEM(Oxidation (M))PLLLQ_	ENSG00000132874|ENST00000255226|SLC14A2;ENST00000323329.3_1_18:43217087-43224130:+|nuORF	53.351449002276354	0.5676011784961348	6				NaN	NaN	0	NaN	5648	3014	8659
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8665	24.934	NaN	11201	30	0	1504.6	0.106	+			44431	TSLSVSTPK	9	83	460.2575954182687	918.5006379033374	2	460.2580261230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TSLSVSTPK_	ENSG00000136021|ENST00000360820|SCYL2;ENST00000392253.2_1_2:202275598-202275970:-|nuORF	101.25262130126117	0.03792372629710479	6				NaN	NaN	0	NaN	5649	3014	8659
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8666	24.936	NaN	13147	30	0	986.84	0.036	+			27890	MTMDRPLSH	9	84	544.2538489719188	1086.4931450106376	2	544.255126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MTMDRPLSH_	ENSG00000185950|ENST00000375856|IRS2	132.757866228626	0.013877640931359021	6				NaN	NaN	0	NaN	5650	3014	8659
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8684	24.972	NaN	19416	30	0	2836.2	0.214	+			45082	TVICSTINK	9	79	518.2780149136746	1034.5414768941491	2	518.279052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_TVIC(Carbamidomethyl (C))STINK_	ACTR3B-JMJD1C|1|fusion;ENSG00000171988|ENST00000399262|JMJD1C;JMJD1C|p.A2114Cfs*5|1|0.04|ENSG00000171988|chr10:63189399-63189400|-/T|frameshift_variant;JMJD1C|p.I2113Kfs*18|1|0.04|ENSG00000171988|chr10:63189400-63189401|-/TT|frameshift_variant;nc|ENSG00000171988|Q15652-2|JMJD1C;nc|ENSG00000171988|Q15652-3|JMJD1C	76.16968421966216	0.11411088698345859	6				NaN	NaN	0	NaN	5665	3017	8683
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8685	24.976	NaN	34370	30	0	15339	0.106				-1	 	0	79	504.75428587675566	1007.4940188203113	2	504.755126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5666	3017	8683
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8686	24.978	NaN	15067	30	0	1993	0.106	+			47680	VSDSGAHVL	9	81	442.7271343970071	NaN	0	442.7270202636719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSDSGAHVL_	ENSG00000064102|ENST00000261191|INTS13	106.41520541750704	0.01293449659060185	6				NaN	NaN	0	NaN	5667	3017	8683
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8687	24.98	NaN	19234	30	0	6265.9	0.106				-1	 	0	79	578.8081567698787	1155.6017606065573	2	578.8091430664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5668	3017	8683
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8688	24.982	NaN	26259	30	0	5575.5	0.106	+			37892	SNYNLPMHK	9	98	368.51439418453117	1102.5213531537936	3	368.5148010253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SNYNLPMHK_	ENSG00000174444|ENST00000307961|RPL4;ENST00000422486.1_1_3:185135660-185136437:-|nuORF;ENST00000567229.5_1_15:66791747-66793486:-|nuORF	54.722347961057174	0.257609425301511	6				NaN	NaN	0	NaN	5669	3017	8683
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8689	24.984	NaN	18704	30	0	5139.3	0.032	+			16825	HPDSAAVL	8	91	405.21218012975964	808.4098073263193	2	405.2110900878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HPDSAAVL_	ENSG00000188559|ENST00000202677|RALGAPA2;nc|ENSG00000188559|Q2PPJ7-2|RALGAPA2;nc|ENSG00000188559|Q2PPJ7-3|RALGAPA2;RALGAPA2|p.G1450Dfs*10|1|0.09|ENSG00000188559|chr20:20513020-20513020|C/-|frameshift_variant;RALGAPA2|p.L1495Rfs*46|1|0.07|ENSG00000188559|chr20:20512885-20512885|A/-|frameshift_variant;RALGAPA2|p.Y1040Tfs*3|1|0.35|ENSG00000188559|chr20:20571496-20571496|A/-|frameshift_variant	35.200714571348534	0.6875396545722289	6				NaN	NaN	0	NaN	5670	3017	8683
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8690	24.984	NaN	14566	30	0	2103.1	0.139	+			38727	SSLGDAINK	9	81	452.73974082918227	903.4649287251646	2	452.7401428222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSLGDAINK_	ENSG00000110080|ENST00000444328|ST3GAL4;nc|ENSG00000110080|Q11206-2|ST3GAL4;nc|ENSG00000110080|Q11206-3|ST3GAL4;nc|ENSG00000110080|Q11206-4|ST3GAL4;nc|ENSG00000110080|Q11206-5|ST3GAL4;nc|ENSG00000110080|Q11206-6|ST3GAL4;nc|ENSG00000110080|Q11206-7|ST3GAL4	98.58198989935565	0.04066992115528678	6				NaN	NaN	0	NaN	5671	3017	8683
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8708	25.021	NaN	40868	30	0	13625	0.214	+			46485	VETGVLKPG	9	92	450.2625581763277	898.5105634194554	2	450.26324462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VETGVLKPG_	ENSG00000156508|ENST00000309268|EEF1A1;ENST00000436459.2_1_9:135895553-135896258:+|nuORF;ENST00000450915.1_1_7:88268512-88269193:+|nuORF;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	98.62937762414208	0.04060045538121712	6				NaN	NaN	0	NaN	5686	3020	8707
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8709	25.025	NaN	56987	30	0	24681	0.106				-1	 	0	58	322.1931295301403	642.3717061270806	2	322.193603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5687	3020	8707
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8710	25.027	NaN	33604	30	0	7665.2	0.106	+			46552	VFHIHNESW	9	91	390.1889862342091	1167.5451293028273	3	390.1893005371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VFHIHNESW_	ATRN|p.P984Lfs*34|1|0.23|ENSG00000088812|chr20:3584079-3584079|C/-|frameshift_variant;ENSG00000088812|ENST00000262919|ATRN;nc|ENSG00000088812|O75882-2|ATRN;nc|ENSG00000088812|O75882-3|ATRN	52.936696900407355	0.27249468807391813	6				NaN	NaN	0	NaN	5688	3020	8707
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8711	25.029	NaN	15015	30	0	6098.5	0.106	+			47633	VSAQAVKQVVP	11	80	375.892055213916	1124.6543362419482	3	375.89239501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSAQAVKQVVP_	ENSG00000189308|ENST00000340417|LIN54;nc|ENSG00000189308|Q6MZP7-2|LIN54;nc|ENSG00000189308|Q6MZP7-3|LIN54;nc|ENSG00000189308|Q6MZP7-4|LIN54	39.873155843976775	0.5596786644756743	6				NaN	NaN	0	NaN	5689	3020	8707
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8712	25.03	NaN	13657	30	0	2704.5	0.106	+			24475	LGGITSPAEI	10	82	479.2653806620359	956.5162083908718	2	479.265869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LGGITSPAEI_	ENSG00000104356|ENST00000401707|POP1;POP1|p.T752Lfs*12|3|0.32|ENSG00000104356|chr8:98156240-98156240|A/-|frameshift_variant	66.42927471994793	0.3073667423445326	6				NaN	NaN	0	NaN	5690	3020	8707
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8713	25.032	NaN	12921	30	0	1068.5	0.106				-1	 	0	80	471.7187726623939	941.4229923915879	2	471.7191162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5691	3020	8707
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8714	25.034	NaN	47355	30	0	5856.1	0.035	+			24087	LEKGKETLL	9	111	515.8102166291015	1029.605880325003	2	515.8109130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LEKGKETLL_	ENSG00000204592|ENST00000376630|HLA-E	136.5150327860613	0.012115003498012726	6				NaN	NaN	0	NaN	5692	3020	8707
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8732	25.07	NaN	75562	30	0	14255	0.214				-1	 	0	97	460.23583862404166	459.2285621574417	1	460.23675537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5707	3023	8731
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8733	25.073	NaN	46836	30	0	3790.5	0.106				-1	 	0	96	517.26105118192	1032.50754943064	2	517.2619018554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5708	3023	8731
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8734	25.075	NaN	30214	30	0	10933	0.106	+			9653	ELSKAKEII	9	88	344.2091163428946	1029.605519628884	3	344.2096252441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ELSKAKEII_	DST|p.K5076Nfs*24|1|0.31|ENSG00000151914|chr6:56472218-56472218|T/-|frameshift_variant;DST|p.T4428Nfs*23|1|0.12|ENSG00000151914|chr6:56497896-56497897|-/T|frameshift_variant;ENSG00000151914|ENST00000680361|DST;nc|ENSG00000151914|Q03001-9|DST;nc|ENSG00000151914|Q03001|DST	83.6470233535746	0.08277643980271215	6				NaN	NaN	0	NaN	5709	3023	8731
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8735	25.077	NaN	31428	30	0	4898.7	0.106	+			33965	RSDTPLIYK	9	87	546.8055217966061	1091.596490660012	2	546.8064575195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RSDTPLIYK_	ENSG00000196305|ENST00000443024|IARS1	91.26522074875469	0.06129826844580791	6				NaN	NaN	0	NaN	5710	3023	8731
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8736	25.079	NaN	9448.9	30	0	1376.3	0.106	+			50386	YAACQSHAF	9	84	527.7235416679307	1053.4325304026613	2	527.7245483398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_YAAC(Carbamidomethyl (C))QSHAF_	ENSG00000244187|ENST00000290079|TMEM141;ENST00000465017.5_1_9:139685862-139687281:+|nuORF;ENST00000489739.1_1_9:139685858-139686514:+|nuORF	104.0567914643314	0.03506238181059741	6				NaN	NaN	0	NaN	5711	3023	8731
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8737	25.081	NaN	10267	30	0	2164.3	0.037	+			7269	DANICYLVC	9	75	564.247432113241	1126.4803112932818	2	564.2485961914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Carbamidomethyl (C)	_DANIC(Carbamidomethyl (C))YLVC(Carbamidomethyl (C))_	ENST00000523334.1_1_6:114270238-114277280:-|nuORF	58.78195531508484	0.22376836668196862	6				NaN	NaN	0	NaN	5712	3023	8731
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8738	25.081	NaN	13912	30	0	2481.1	0.14			+	20362	KESLATKE	8	78	453.2501101591205	904.485667385041	2	453.2502136230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KESLATKE_	REV__CROCC|p.E1068K|1|0.21|ENSG00000058453|chr1:16954238-16954238|G/A|missense_variant;REV__ENSG00000058453|ENST00000375541|CROCC;REV__nc|ENSG00000058453|Q5TZA2-2|CROCC	90.60085204095205	0.2756512185673585	6				NaN	NaN	0	NaN	5713	3023	8731
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8756	25.121	NaN	85379	30	0	28282	0.214				-1	 	0	107	398.8993206947581	1193.6761326844744	3	398.8994445800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5728	3026	8755
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8757	25.124	NaN	17684	30	0	8454.3	0.106				-1	 	0	70	353.5565894104396	1057.6479388315188	3	353.55706787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5729	3026	8755
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8758	25.126	NaN	18417	30	0	8619.6	0.106				-1	 	0	80	367.24436911444366	1098.711277943531	3	367.24462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5730	3026	8755
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8759	25.128	NaN	13987	30	0	4152.6	0.106	+			1975	AIYKTPPGIQK	11	72	405.9077394116025	1214.7013888350075	3	405.907958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AIYKTPPGIQK_	BCOR|p.K1061Sfs*52|1|0.28|ENSG00000183337|chrX:40071029-40071029|T/-|frameshift_variant;BCOR|p.K839Qfs*5|1|0.26|ENSG00000183337|chrX:40072831-40072832|-/G|frameshift_variant;BCOR|p.K839Sfs*17|1|0.41|ENSG00000183337|chrX:40072832-40072832|G/-|frameshift_variant;BCOR|p.L1646Sfs*28|1|0.06|ENSG00000183337|chrX:40053926-40053926|G/-|frameshift_variant;BCOR|p.L487Hfs*13|1|0.67|ENSG00000183337|chrX:40073886-40073887|-/GTGT|frameshift_variant;BCOR|p.N529Tfs*60|1|0.51|ENSG00000183337|chrX:40073760-40073760|T/-|frameshift_variant;BCOR|p.P1621Qfs*53|2|0.52|ENSG00000183337|chrX:40054000-40054000|G/-|frameshift_variant;BCOR|p.R1215Kfs*30|1|0.14|ENSG00000183337|chrX:40063811-40063812|-/T|frameshift_variant;ENSG00000183337|ENST00000378444|BCOR;ENST00000490976.5_1_X:39931586-39937182:-|nuORF;nc|ENSG00000183337|Q6W2J9-2|BCOR;nc|ENSG00000183337|Q6W2J9-3|BCOR;nc|ENSG00000183337|Q6W2J9-4|BCOR	34.08650109265054	0.6322515996262609	6				NaN	NaN	0	NaN	5731	3026	8755
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8760	25.13	NaN	10522	30	0	979.33	0.106			+	26152	LSQIQLTLV	9	77	507.812465531112	1013.6103781290241	2	507.8131103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSQIQLTLV_	REV__ENST00000484256.1_1_22:29191536-29192243:-|nuORF;REV__nc|ENSG00000100219|P17861|XBP1	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	5732	3026	8755
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8761	25.132	NaN	11178	30	0	778.17	0.034	+			910	AEIEGLKGQ	9	85	472.7555216383866	NaN	0	472.7556457519531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEIEGLKGQ_	CON__H-INV:HIT000292931;CON__P05787;CON__REFSEQ:XP_092267;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;ENST00000547031.5_1_12:53292389-53294972:-|nuORF;ENST00000562317.1_1_16:78082520-78083381:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	72.87924865735499	0.09578366712754152	6				NaN	NaN	0	NaN	5733	3026	8755
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8762	25.132	NaN	2575.3	30	0	292.33	0.143	+			34816	RYLENGKETL	10	67	611.8242278292892	1221.6339027253782	2	611.8250122070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RYLENGKETL_	ENSG00000204525|ENST00000376228|HLA-C;ENSG00000204642|ENST00000259951|HLA-F;ENSG00000206503|ENST00000376809|HLA-A;ENST00000484704.5_1_6:29691969-29693843:+|nuORF;ENST00000487245.5_1_6:31236948-31239147:-|nuORF;ENST00000495183.5_1_6:29910749-29913287:+|nuORF;ENST00000496081.5_1_6:29910330-29912419:+|nuORF;HLA-C|p.A269Gfs*66|1|0.07|ENSG00000204525|chr6:31270299-31270300|-/C|frameshift_variant;nc|ENSG00000204525|P10321-2|HLA-C;nc|ENSG00000204642|P30511-2|HLA-F;nc|ENSG00000204642|P30511|HLA-F;nc|ENSG00000206341|P01893|HLA-H;nc|ENSG00000206503|P04439-2|HLA-A	45.02220120713402	0.5028680121232791	6				NaN	NaN	0	NaN	5734	3026	8755
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8780	25.172	NaN	34717	30	0	8125.7	0.214				-1	 	0	88	434.7794985715735	867.5444442099471	2	434.77984619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5749	3029	8779
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8781	25.176	NaN	14920	30	0	5000.1	0.106			+	38363	SRREPFVAL	9	80	358.8738216235763	1073.599635470929	3	358.8743896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SRREPFVAL_	REV__ENST00000581302.5_1_18:21057123-21059312:+|nuORF	26.69291269510374	0.5537881896960711	6				NaN	NaN	0	NaN	5750	3029	8779
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8782	25.178	NaN	19064	30	0	6008.8	0.106				-1	 	0	69	343.20913546988254	1026.6055770098476	3	343.2095947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5751	3029	8779
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8783	25.18	NaN	12523	30	0	2391.6	0.106			+	50284	WRSCLKIQI	9	82	602.337106009885	1202.65965908657	2	602.33837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_WRSC(Carbamidomethyl (C))LKIQI_	REV__ENST00000493587.1_1_8:100880383-100883116:+|nuORF	71.87747018426188	0.13267044672804276	6				NaN	NaN	0	NaN	5752	3029	8779
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8784	25.181	NaN	11526	30	0	4507.8	0.106				-1	 	0	78	529.7440665241262	1057.4735801150523	2	529.7449951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5753	3029	8779
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8785	25.183	NaN	14674	30	0	2353.3	0.034	+			8258	EAGGDAATPD	10	88	452.1878144451359	902.3610759570719	2	452.1884460449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EAGGDAATPD_	ENSG00000176155|ENST00000694881|CCDC57;nc|ENSG00000176155|Q2TAC2-2|CCDC57;nc|ENSG00000176155|Q2TAC2|CCDC57	54.776311868738084	0.41334902933431344	6				NaN	NaN	0	NaN	5754	3029	8779
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8786	25.184	NaN	7785.1	30	0	1652.3	0.139	+			50417	YAARARLL	8	71	467.2850913184999	932.5556297037998	2	467.2847900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YAARARLL_	ENSG00000108106|ENST00000264552|UBE2S	37.028477286268924	0.6747514403204248	6				NaN	NaN	0	NaN	5755	3029	8779
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8804	25.223	NaN	61949	30	0	13007	0.214				-1	 	0	82	422.2553980930904	842.4962432529808	2	422.2558898925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5770	3032	8803
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8805	25.227	NaN	18451	30	0	2847.3	0.106			+	42702	TDALELALR	9	80	501.28469071260986	1000.5548284920197	2	501.28472900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TDALELALR_	REV__ENSG00000083535|ENST00000326291|PIBF1;REV__ENST00000492803.1_1_13:73372062-73409389:+|nuORF;REV__PIBF1|p.L495Ifs*10|2|0.29|ENSG00000083535|chr13:72893937-72893938|-/A|frameshift_variant	75.04331003522576	0.118981335847003	6				NaN	NaN	0	NaN	5771	3032	8803
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8806	25.229	NaN	16704	30	0	8553.7	0.106				-1	 	0	70	370.2239649422648	1107.6500654269944	3	370.2242736816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5772	3032	8803
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8807	25.231	NaN	7427.3	30	0	1212.5	0.106	+			22530	KTQNFLIQK	9	76	560.3291413636568	1118.6437297941136	2	560.3300170898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTQNFLIQK_	BCL10|p.S167Lfs*6|2|0.31|ENSG00000142867|chr1:85267830-85267830|A/-|frameshift_variant;ENSG00000142867|ENST00000648566|BCL10	131.115847015877	0.014647977962315902	6				NaN	NaN	0	NaN	5773	3032	8803
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8808	25.232	NaN	10369	30	0	1238.4	0.106	+			23387	LAADMDLHC	9	87	531.2223573822758	1060.4301618313516	2	531.2235107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C),Oxidation (M)	_LAADM(Oxidation (M))DLHC(Carbamidomethyl (C))_	AMER2|p.S94Afs*8|1|0.33|ENSG00000165566|chr13:25171344-25171344|C/-|frameshift_variant;ENSG00000165566|ENST00000515384|AMER2;nc|ENSG00000165566|Q8N7J2-2|AMER2	76.84663266511073	0.11118375776443899	6				NaN	NaN	0	NaN	5774	3032	8803
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8809	25.234	NaN	10817	30	0	824.01	0.036	+			16405	HEQSRIITV	9	81	541.8005928597896	1081.5866327863791	2	541.8019409179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HEQSRIITV_	ENSG00000158006|ENST00000374282|PAFAH2	33.921630207806714	0.48623198279849766	6				NaN	NaN	0	NaN	5775	3032	8803
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8810	25.235	NaN	13044	30	0	1315.7	0.147			+	-1	KSFIIRCHCAK	11	89	473.9174648928059	1418.7305652786179	3	473.9172668457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C)	_KSFIIRC(Carbamidomethyl (C))HC(Carbamidomethyl (C))AK_	REV__ENSG00000113328|ENST00000340828|CCNG1;REV__nc|ENSG00000113328|P51959-2|CCNG1	28.5767321226876	0.690044582712672	6				NaN	NaN	0	NaN	5776	3032	8803
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8828	25.274	NaN	54510	30	0	13244	0.214				-1	 	0	90	488.22953324678815	974.4445135603763	2	488.2298278808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5791	3035	8827
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8829	25.278	NaN	10419	30	0	1262.3	0.106				-1	 	0	69	495.7531026254146	989.4916523176292	2	495.7534484863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5792	3035	8827
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8830	25.28	NaN	27059	30	0	3837.1	0.106	+			26396	LTEAPLNPK	9	86	491.78143741994415	981.5483219066883	2	491.7818298339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LTEAPLNPK_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000403258.1_1_6:88986231-88986483:-|nuORF;ENST00000446382.2_1_9:6834760-6835018:+|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000502306.1_1_5:15450853-15451165:+|nuORF;ENST00000567299.1_1_19:9629420-9629708:+|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;nc|ENSG00000204434|Q9BYX7|POTEKP	148.04295825190792	0.0073252839830139265	6				NaN	NaN	0	NaN	5793	3035	8827
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8831	25.282	NaN	22955	30	0	8821.7	0.106				-1	 	0	56	342.1985474085563	1023.5738128258689	3	342.198974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5794	3035	8827
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8832	25.284	NaN	5656.5	30	0	1703.3	0.106			+	-1	VSLNIMFIV	9	52	351.20135745205937	NaN	0	351.2013244628906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_VSLNIM(Oxidation (M))FIV_	REV__ENSG00000182162|ENST00000381297|P2RY8	32.81241826257853	0.3119040447479903	6				NaN	NaN	0	NaN	5795	3035	8827
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8833	25.286	NaN	25362	30	0	2908.4	0.037	+			15321	GTVIHFNNPK	10	83	563.8033706572597	1125.5921883813194	2	563.80419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTVIHFNNPK_	ENSG00000134717|ENST00000313334|BTF3L4;ENSG00000145741|ENST00000380591|BTF3;nc|ENSG00000134717|Q96K17-2|BTF3L4;nc|ENSG00000145741|P20290-2|BTF3	146.78539889680295	0.009066311176022962	6				NaN	NaN	0	NaN	5796	3035	8827
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8834	25.286	NaN	9226.1	30	0	1956.4	0.142	+			33764	RPTEFVNHY	9	83	581.7846797214895	1161.554806509779	2	581.7854614257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RPTEFVNHY_	ENSG00000139567|ENST00000388922|ACVRL1	65.46538089061403	0.16805504838372562	6				NaN	NaN	0	NaN	5797	3035	8827
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8852	25.326	NaN	390890	30	0	55723	0.146	+			15465	GTYVSSVPR	9	75	483.25591142643987	964.4972699196798	2	483.25592041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTYVSSVPR_	ENSG00000204252|ENST00000229829|HLA-DOA;ENST00000485901.1_1_6:32974617-32975137:-|nuORF	145.15565482312357	0.00806134135205793	6				NaN	NaN	0	NaN	5812	3038	8851
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8853	25.328	NaN	23120	30	0	2625.6	0.106	+			43506	TGSETKITY	9	97	500.2542141332401	998.4938753332802	2	500.2530212402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TGSETKITY_	ENSG00000174197|ENST00000703841|MGA;ENST00000566288.1_1_15:42040980-42042834:+|nuORF;MGA|p.D2578Rfs*45|1|0.32|ENSG00000174197|chr15:41762342-41762343|-/A|frameshift_variant;MGA|p.S2228Kfs*5|1|0.33|ENSG00000174197|chr15:41750284-41750285|-/A|frameshift_variant;nc|ENSG00000174197|Q8IWI9-3|MGA;nc|ENSG00000174197|Q8IWI9|MGA	72.2432373244024	0.13108886737667413	6				NaN	NaN	0	NaN	5813	3038	8851
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8854	25.33	NaN	46549	30	0	17064	0.106			+	3528	ASSNLRPPWV	10	90	376.20491334943637	1125.5929106485091	3	376.205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASSNLRPPWV_	REV__ENSG00000165626|ENST00000466271|BEND7;REV__nc|ENSG00000165626|Q8N7W2-2|BEND7;REV__nc|ENSG00000165626|Q8N7W2-3|BEND7	27.882242232435846	0.6521336255503853	6				NaN	NaN	0	NaN	5814	3038	8851
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8855	25.332	NaN	18037	30	0	2239.3	0.106	+			36102	SEKHIEVEV	9	88	535.2790241208423	1068.5434953084846	2	535.2799072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SEKHIEVEV_	ENSG00000130935|ENST00000253247|NOL11;ENST00000583108.5_1_17:65733207-65733809:+|nuORF	87.69643885390035	0.07135982304947239	6				NaN	NaN	0	NaN	5815	3038	8851
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8856	25.334	NaN	9043.9	30	0	873.7	0.106	+			29560	PEVTGTHK	8	72	434.72917292419436	867.4437929151887	2	435.7284240722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PEVTGTHK_	ENSG00000196924|ENST00000369850|FLNA;FLNA|p.A1026Lfs*20|1|0.42|ENSG00000196924|chrX:154361439-154361439|C/-|frameshift_variant;FLNA|p.D535Mfs*34|1|0.31|ENSG00000196924|chrX:154365224-154365224|C/-|frameshift_variant;FLNA|p.G2237Efs*109|1|0.28|ENSG00000196924|chrX:154352240-154352240|C/-|frameshift_variant;FLNA|p.Q1716Sfs*23|2|0.38|ENSG00000196924|chrX:154354896-154354896|G/-|frameshift_variant;FLNA|p.R2520Vfs*16|1|0.7|ENSG00000196924|chrX:154349560-154349560|G/-|frameshift_variant;nc|ENSG00000196924|P21333-2|FLNA	44.116797842482775	0.6307669463330267	6				NaN	NaN	0	NaN	5816	3038	8851
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8857	25.336	NaN	7489.1	30	0	921.3	0.106	+			2333	AMQGDRLGI	9	72	480.74913925976125	959.4837255863225	2	480.7496032714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AMQGDRLGI_	ENSG00000132394|ENST00000254730|EEFSEC;nc|ENSG00000132394|P57772-2|EEFSEC	57.81127852772723	0.2318599694398087	6				NaN	NaN	0	NaN	5817	3038	8851
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8858	25.337	NaN	5785.2	30	0	699.48	0.033	+			726	AEAVRTTL	8	61	430.7449051462032	859.4752573592065	2	430.74530029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AEAVRTTL_	ENSG00000135624|ENST00000258091|CCT7;ENST00000461290.5_1_2:73461506-73471178:+|nuORF;ENST00000464397.1_1_2:73461506-73466971:+|nuORF;ENST00000480489.5_1_2:73461506-73470269:+|nuORF	90.60085204095205	0.2756512185673585	6				NaN	NaN	0	NaN	5818	3038	8851
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8876	25.374	NaN	24788	30	0	1627.1	0.214	+			10464	EVNPNTRVM	9	83	530.265744059734	1058.5169351862678	2	530.2669067382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EVNPNTRVM_	ENSG00000123353|ENST00000243045|ORMDL2;ENSG00000128699|ENST00000392349|ORMDL1;ENSG00000172057|ENST00000304046|ORMDL3;nc|ENSG00000172057|Q8N138-4|ORMDL3	171.53180478179638	0.0025054460641941692	6				NaN	NaN	0	NaN	5833	3041	8875
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8877	25.377	NaN	9805.4	30	0	1657	0.106	+			8445	EARKQVEVF	9	80	553.304260238184	1104.593967543168	2	553.3043823242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EARKQVEVF_	ENSG00000100911|ENST00000216802|PSME2;ENST00000471700.6_1_14:24612807-24615772:-|nuORF;ENST00000558931.5_1_14:24615401-24615790:-|nuORF;ENST00000559493.5_1_14:24614434-24615772:-|nuORF;ENST00000560592.5_1_14:24614852-24615790:-|nuORF	80.45461616416974	0.09558281504443908	6				NaN	NaN	0	NaN	5834	3041	8875
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8878	25.38	NaN	19856	30	0	2735.5	0.106	+			39955	STMGYMMAK	9	91	518.2176215716919	1034.4206902101837	2	518.2196655273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_STMGYMM(Oxidation (M))AK_	ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;ENST00000518337.1_1_8:74128289-74128592:-|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P	93.19546047674547	0.05585629608842056	6				NaN	NaN	0	NaN	5835	3041	8875
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8879	25.381	NaN	4138.4	30	0	1996.7	0.106			+	-1	AKTATVLMR	9	47	336.1949892005385	1005.5631382018155	3	336.1957092285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_AKTATVLM(Oxidation (M))R_	REV__ENSG00000112539|ENST00000230301|C6orf118	16.71738777980365	0.6112419832031293	6				NaN	NaN	0	NaN	5836	3041	8875
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8880	25.383	NaN	13443	30	0	1482.2	0.106	+			24292	LEYTEEEV	8	83	506.23177714553975	NaN	0	506.2322692871094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LEYTEEEV_	ENSG00000047644|ENST00000380861|WWC3	57.81127852772723	1.7418937515398478	6				NaN	NaN	0	NaN	5837	3041	8875
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8881	25.385	NaN	8111.9	30	0	766.72	0.035	+			36164	SEKVSKISL	9	77	495.79476034173416	989.5749677502683	2	495.7953186035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SEKVSKISL_	ENSG00000129250|ENST00000320785|KIF1C;KIF1C|p.K1057Sfs*31|1|0.14|ENSG00000129250|chr17:5024005-5024005|A/-|frameshift_variant;KIF1C|p.L962Cfs*126|1|0.31|ENSG00000129250|chr17:5023717-5023717|G/-|frameshift_variant;KIF1C|p.Y1081Ifs*15|1|0.28|ENSG00000129250|chr17:5024072-5024073|-/C|frameshift_variant	59.93077597824379	0.21419174904018318	6				NaN	NaN	0	NaN	5838	3041	8875
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8882	25.386	NaN	11751	30	0	3774.6	0.138			+	29778	PIHALLGA	8	62	396.24217555914646	790.4697981850929	2	396.2424621582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PIHALLGA_	REV__sp|P09717|US16_HCMVAUncharacterizedproteinHVLF2OS=Humancytomegalovirus(strainAD169)OX=10360GN=US16PE=3SV=2;REV__sp|Q6SVZ0|US16_HCMVMProteinUS16OS=Humancytomegalovirus(strainMerlin)OX=295027GN=US16PE=3SV=1	43.626045697637714	0.6338121648150432	6				NaN	NaN	0	NaN	5839	3041	8875
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8900	25.424	NaN	89228	30	0	9689.2	0.214			+	26399	LTEEKESI	8	96	474.7477838220279	947.4810147108558	2	474.74822998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LTEEKESI_	REV__ENST00000492304.1_1_1:150123092-150125090:+|nuORF	68.78682469695295	0.41700713582915416	6				NaN	NaN	0	NaN	5854	3044	8899
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8901	25.428	NaN	50537	30	0	12952	0.106			+	27185	MDSTEQTLE	9	87	527.2236045272168	1052.4326561212335	2	527.2247314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MDSTEQTLE_	REV__ENSG00000198765|ENST00000369522|SYCP1;REV__SYCP1|p.D793Tfs*65|1|0.36|ENSG00000198765|chr1:114977603-114977603|A/-|frameshift_variant;REV__SYCP1|p.K931Rfs*6|1|0.27|ENSG00000198765|chr1:114994781-114994781|A/-|frameshift_variant;REV__SYCP1|p.R882Efs*6|1|0.41|ENSG00000198765|chr1:114984799-114984800|-/A|frameshift_variant	79.71258880314673	0.09879134589249085	6				NaN	NaN	0	NaN	5855	3044	8899
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8902	25.43	NaN	70312	30	0	18855	0.106				-1	 	0	96	469.2763287786737	936.5381046241474	2	469.27655029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5856	3044	8899
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8903	25.432	NaN	51362	30	0	10244	0.106				-1	 	0	101	530.791927753464	1059.569302573728	2	530.7930297851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5857	3044	8899
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8904	25.434	NaN	26428	30	0	2089.2	0.106	+			43228	TEVLKTHGL	9	92	499.28735310409746	NaN	0	499.28729248046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TEVLKTHGL_	ENSG00000142541|ENST00000391857|RPL13A	120.30596017624542	0.0020832630064203913	6				NaN	NaN	0	NaN	5858	3044	8899
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8905	25.436	NaN	25547	30	0	5222.2	0.034			+	39049	SSSPRGRPQ	9	76	486.2549826365588	970.4954123399176	2	486.2555236816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSSPRGRPQ_	REV__ENSG00000161681|ENST00000293441|SHANK1;REV__nc|ENSG00000161681|Q9Y566-3|SHANK1;REV__SHANK1|p.L2065Sfs*68|1|0.18|ENSG00000161681|chr19:50662259-50662259|C/-|frameshift_variant;REV__SHANK1|p.T693Pfs*33|2|0.23|ENSG00000161681|chr19:50688940-50688940|G/-|frameshift_variant	54.776311868738084	0.25715957988447635	6				NaN	NaN	0	NaN	5859	3044	8899
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8906	25.436	NaN	14142	30	0	2711.2	0.141				-1	 	0	76	539.7429036064838	1077.4712542797674	2	539.7439575195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5860	3044	8899
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8924	25.474	NaN	177610	30	0	25398	0.115	+			40015	STMSTNGIPR	10	100	532.2628409465816	1062.5111289599631	2	532.263916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STMSTNGIPR_	ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF	148.6902309647307	0.008728094565931875	6				NaN	NaN	0	NaN	5875	3047	8923
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8925	25.476	NaN	175250	30	0	27704	0.106			+	42073	SYDTFHVSK	9	91	542.2594590749723	1082.5043652167444	2	542.2606811523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SYDTFHVSK_	REV__ENSG00000163701|ENST00000383814|IL17RE;REV__ENST00000383815.7_1_3:9944714-9956386:+|nuORF;REV__nc|ENSG00000163701|Q8NFR9-2|IL17RE;REV__nc|ENSG00000163701|Q8NFR9-3|IL17RE;REV__nc|ENSG00000163701|Q8NFR9-4|IL17RE	66.42927471994793	0.16001998865088202	6				NaN	NaN	0	NaN	5876	3047	8923
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8926	25.478	NaN	85940	30	0	8519.8	0.106				-1	 	0	116	367.90919331114293	1100.7057505336288	3	367.9095153808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5877	3047	8923
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8927	25.48	NaN	22679	30	0	8509.8	0.106	+			4290	ATGGTFVVK	9	72	440.2497743088937	878.4849956845874	2	440.25	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATGGTFVVK_	ENSG00000198208|ENST00000557413|RPS6KL1;ENST00000555834.5_1_14:75375979-75389943:-|nuORF;nc|ENSG00000198208|Q9Y6S9-2|RPS6KL1;nc|ENSG00000198208|Q9Y6S9-4|RPS6KL1	185.54966270084765	0.0007389233275946833	6				NaN	NaN	0	NaN	5878	3047	8923
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8928	25.482	NaN	15005	30	0	1739.6	0.106	+			32957	REDKPPLAV	9	69	512.7923677068204	1023.5701824804408	2	512.7927856445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_REDKPPLAV_	ENSG00000004399|ENST00000324093|PLXND1;ENST00000512807.1_1_3:129278266-129279214:-|nuORF;nc|ENSG00000004399|Q9Y4D7-2|PLXND1;PLXND1|p.T1897Rfs*17|1|0.06|ENSG00000004399|chr3:129556402-129556402|G/-|frameshift_variant	70.8162118820467	0.13725933411854815	6				NaN	NaN	0	NaN	5879	3047	8923
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8929	25.483	NaN	12270	30	0	4426.1	0.106	+			25984	LSKAWGRGGV	10	77	515.7924369746509	1029.5703210161016	2	515.7926635742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSKAWGRGGV_	ENSG00000066735|ENST00000423312|KIF26A;KIF26A|p.G1145Afs*103|1|0.2|ENSG00000066735|chr14:104176218-104176218|G/-|frameshift_variant;KIF26A|p.L1096Wfs*152|1|0.43|ENSG00000066735|chr14:104176064-104176064|G/-|frameshift_variant;KIF26A|p.P1147Lfs*101|2|0.24|ENSG00000066735|chr14:104176223-104176223|C/-|frameshift_variant;KIF26A|p.R1269Gfs*7|1|0.38|ENSG00000066735|chr14:104176588-104176588|C/-|frameshift_variant	36.446750945000026	0.5818864909973037	6				NaN	NaN	0	NaN	5880	3047	8923
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8930	25.485	NaN	9815.7	30	0	993.75	0.035	+			9612	ELMTLMVY	8	74	508.2452950969436	1014.4760372606872	2	508.24560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_ELM(Oxidation (M))TLMVY_	nc|ENSG00000175063|O00762-3|UBE2C	62.97842346883844	0.4722955155785405	6				NaN	NaN	0	NaN	5881	3047	8923
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8931	25.486	NaN	24912	30	0	3582	0.14				-1	ATAELIMSR	9	89	504.26099759937756	1006.5074422655551	2	504.26080322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Oxidation (M)	_ATAELIM(Oxidation (M))SR_	ENSG00000105677|ENST00000222284|TMEM147;ENST00000477168.6_1_19:36036641-36037810:+|nuORF;ENST00000595467.1_1_19:36037522-36037810:+|nuORF;nc|ENSG00000105677|Q9BVK8-2|TMEM147	120.30596017624542	0.02101454110788768	6				NaN	NaN	0	NaN	5882	3047	8923
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8949	25.524	NaN	56645	30	0	9572.7	0.214				-1	 	0	96	458.2603384032603	914.5061238733206	2	458.2607116699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5897	3050	8948
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8950	25.528	NaN	25298	30	0	5656.4	0.106				-1	 	0	80	430.2471925793933	858.4798322255866	2	430.24761962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5898	3050	8948
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8951	25.53	NaN	24114	30	0	12422	0.106				-1	 	0	74	436.7448791244656	871.4752053157313	2	436.7452697753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5899	3050	8948
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8952	25.532	NaN	10490	30	0	1051.1	0.106			+	32561	QVVPKFKKK	9	85	551.3602786611772	1100.7060043891543	2	551.3610229492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QVVPKFKKK_	REV__COBL|p.R1238Gfs*4|1|0.12|ENSG00000106078|chr7:51025165-51025165|T/-|frameshift_variant;REV__ENSG00000106078|ENST00000265136|COBL;REV__ENST00000462395.1_1_7:51085250-51098638:-|nuORF;REV__nc|ENSG00000106078|O75128-2|COBL;REV__nc|ENSG00000106078|O75128-3|COBL;REV__nc|ENSG00000106078|O75128-6|COBL;REV__nc|ENSG00000106078|O75128-7|COBL	44.116797842482775	0.37197099687881774	6				NaN	NaN	0	NaN	5900	3050	8948
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8953	25.533	NaN	25614	30	0	6113.8	0.106	+			44014	TPKGKGRAAL	10	83	499.80787922612217	997.6012055190444	2	499.8086853027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TPKGKGRAAL_	E2F3|p.T177Nfs*4|1|0.31|ENSG00000112242|chr6:20481223-20481224|-/A|frameshift_variant;E2F3|p.T177Rfs*18|1|0.28|ENSG00000112242|chr6:20481224-20481224|A/-|frameshift_variant;ENSG00000112242|ENST00000346618|E2F3;nc|ENSG00000112242|O00716-2|E2F3	61.691277971877994	0.35045824941635534	6				NaN	NaN	0	NaN	5901	3050	8948
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8954	25.535	NaN	10291	30	0	1685.3	0.032	+			38419	SSAGPGLLK	9	75	415.24203227374255	828.4695116142851	2	415.2424011230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSAGPGLLK_	CON__P08729;CON__Q3KNV1;ENSG00000135480|ENST00000331817|KRT7;ENST00000549638.1_1_12:52641943-52642541:+|nuORF;ENST00000550153.1_1_12:52641566-52642541:+|nuORF;ENST00000552322.5_1_12:52638288-52642544:+|nuORF	96.19043198914106	0.047412499214244314	6				NaN	NaN	0	NaN	5902	3050	8948
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8955	25.536	NaN	14143	30	0	8113.1	0.141				-1	 	0	39	333.541160618244	997.601652454932	3	333.5417785644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5903	3050	8948
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8973	25.575	NaN	25877	30	0	3347.2	0.215	+			20282	KENQVIVRM	9	94	558.8126028430532	1115.6106527529064	2	558.8137817382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KENQVIVRM_	ENSG00000104413|ENST00000433389|ESRP1;ESRP1|p.L333Sfs*55|1|0.35|ENSG00000104413|chr8:94668009-94668009|G/-|frameshift_variant;ESRP1|p.N512Hfs*7|2|0.33|ENSG00000104413|chr8:94674383-94674384|AA/-|frameshift_variant;ESRP1|p.N512Kfs*8|1|0.48|ENSG00000104413|chr8:94674382-94674383|-/A|frameshift_variant;ESRP1|p.N512Tfs*2|2|0.36|ENSG00000104413|chr8:94674383-94674383|A/-|frameshift_variant;nc|ENSG00000104413|Q6NXG1-2|ESRP1;nc|ENSG00000104413|Q6NXG1-3|ESRP1;nc|ENSG00000104413|Q6NXG1-4|ESRP1;nc|ENSG00000104413|Q6NXG1-5|ESRP1	200.15690381979954	3.265422741743988E-05	6				NaN	NaN	0	NaN	5918	3053	8972
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8974	25.579	NaN	36245	30	0	5471	0.106	+			23222	KYGPIRQI	8	85	487.79205110566085	973.5695492781217	2	487.7925720214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KYGPIRQI_	ENSG00000115128|ENST00000233468|SF3B6;ENST00000478050.1_1_2:24296944-24299099:-|nuORF	53.351449002276354	0.5676011784961348	6				NaN	NaN	0	NaN	5919	3053	8972
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8975	25.581	NaN	48174	30	0	19130	0.106				-1	 	0	72	519.3080031138421	1036.6014532944841	2	519.3088989257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5920	3053	8972
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8976	25.583	NaN	9810.7	30	0	3583	0.106			+	10216	ETGQVPSLHNL	11	67	398.8749746805009	1193.6030946417027	3	398.8752136230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ETGQVPSLHNL_	REV__AHCTF1|p.E1870Kfs*19|1|0.27|ENSG00000153207|chr1:246850426-246850426|T/-|frameshift_variant;REV__ENSG00000153207|ENST00000648844|AHCTF1;REV__ENST00000420969.1_1_2:162357792-162360000:-|nuORF;REV__ENST00000470300.5_1_1:247004234-247028597:-|nuORF;REV__ENST00000483900.1_1_1:247015289-247040365:-|nuORF;REV__nc|ENSG00000153207|Q8WYP5-2|AHCTF1;REV__nc|ENSG00000153207|Q8WYP5-3|AHCTF1	32.03412808689991	0.6537793186749145	6				NaN	NaN	0	NaN	5921	3053	8972
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8977	25.585	NaN	21518	30	0	8356.9	0.106			+	45561	TYLLTNAQNY	10	77	400.86774430442944	1199.5814035134883	3	400.86798095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TYLLTNAQNY_	REV__ENSG00000132952|ENST00000255304|USPL1	29.170058357718403	0.6416167986984785	6				NaN	NaN	0	NaN	5922	3053	8972
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8978	25.586	NaN	8333.6	30	0	1099.9	0.038	+			51466	YVHDAPVRSL	10	59	386.2084053154655	NaN	0	386.2085266113281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YVHDAPVRSL_	ENSG00000125538|ENST00000263341|IL1B;ENST00000487639.1_1_2:113588742-113591137:-|nuORF;ENST00000491056.5_1_2:113587940-113590763:-|nuORF	41.42661286455405	0.3598046802465243	6				NaN	NaN	0	NaN	5923	3053	8972
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8979	25.587	NaN	14752	30	0	9537	0.141	+			31865	QPVKVRVSY	9	68	538.3158229367605	1074.6170929403208	2	538.3167114257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QPVKVRVSY_	ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1670Tfs*23|1|0.29|ENSG00000174231|chr17:1659487-1659487|C/-|frameshift_variant	36.31764250033197	0.4634519667168888	6				NaN	NaN	0	NaN	5924	3053	8972
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8997	25.626	NaN	7336.1	30	0	659.08	0.214			+	10140	ESRGCALAAL	10	71	495.7561045367312	989.4976561402624	2	495.7578430175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ESRGCALAAL_	REV__ENST00000368547.3_1_10:135186895-135186961:-|nuORF	41.42661286455405	0.5359995577334734	6				NaN	NaN	0	NaN	5939	3056	8996
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8998	25.63	NaN	5640.4	30	0	2339.2	0.106	+			13238	GILFAAQRSL	10	48	359.21292026872743	1074.6169314063823	3	359.21343994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GILFAAQRSL_	ENST00000297163.3_1_5:135469217-135469343:-|nuORF	21.68575002086885	0.7027366847906487	6				NaN	NaN	0	NaN	5940	3056	8996
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8999	25.632	NaN	6116.8	30	0	1182.8	0.106			+	12130	GAGRLRTTRA	10	68	353.544275973881	1057.610998521843	3	353.5448913574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GAGRLRTTRA_	REV__ENST00000446489.1_1_11:1784244-1784937:-|nuORF	25.57405402267927	0.6709832231498071	6				NaN	NaN	0	NaN	5941	3056	8996
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9000	25.634	NaN	3553.1	30	0	450.01	0.106			+	9236	EGTHLRRHQ	9	74	567.3004152282516	1132.5862775233031	2	567.301025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EGTHLRRHQ_	REV__ENSG00000179930|ENST00000339948|ZNF648;REV__ENSG00000204519|ENST00000282296|ZNF551;REV__nc|ENSG00000204519|Q7Z340-2|ZNF551	69.6276240434122	0.14239879520340665	6				NaN	NaN	0	NaN	5942	3056	8996
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9001	25.636	NaN	6274.7	30	0	1188.5	0.106	+			26397	LTEAPLNPK	9	76	491.78143741994415	981.5483219066883	2	491.7818908691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LTEAPLNPK_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000403258.1_1_6:88986231-88986483:-|nuORF;ENST00000446382.2_1_9:6834760-6835018:+|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000502306.1_1_5:15450853-15451165:+|nuORF;ENST00000567299.1_1_19:9629420-9629708:+|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;nc|ENSG00000204434|Q9BYX7|POTEKP	96.19043198914106	0.047412499214244314	6				NaN	NaN	0	NaN	5943	3056	8996
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9002	25.637	NaN	5016.8	30	0	312.83	0.034	+			35757	SDVKIYKV	8	79	476.2785143846875	950.5424758361751	2	476.2786865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SDVKIYKV_	ENSG00000172409|ENST00000533682|CLP1;nc|ENSG00000172409|Q92989-2|CLP1	40.77816245573522	0.6514838689002179	6				NaN	NaN	0	NaN	5944	3056	8996
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9003	25.638	NaN	9033.3	30	0	1044.6	0.139	+			24446	LGEGDVHSM	9	76	472.7105955943413	NaN	0	472.71026611328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LGEGDVHSM_	ENSG00000150907|ENST00000379561|FOXO1	47.91560031466742	0.22105767942158736	6				NaN	NaN	0	NaN	5945	3056	8996
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9021	25.678	NaN	13616	30	0	2313.9	0.213			+	30923	QELFRLGEQK	10	89	624.3406806390531	1246.666808344906	2	624.3410034179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QELFRLGEQK_	REV__ENSG00000100979|ENST00000372431|PLTP;REV__nc|ENSG00000100979|P55058-2|PLTP;REV__nc|ENSG00000100979|P55058-3|PLTP	63.53385203322761	0.33370026130094593	6				NaN	NaN	0	NaN	5960	3059	9020
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9022	25.681	NaN	14316	30	0	3320.1	0.106	+			869	AEHERELAL	9	79	534.2771533229745	1066.539753712749	2	534.2781982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEHERELAL_	ENSG00000115306|ENST00000356805|SPTBN1;ENSG00000173898|ENST00000533211|SPTBN2;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1;nc|ENSG00000173898|O15020-2|SPTBN2;SPTBN1|p.K503Rfs*24|1|0.06|ENSG00000115306|chr2:54626095-54626095|G/-|frameshift_variant;SPTBN2|p.P924Qfs*35|1|0.39|ENSG00000173898|chr11:66701629-66701629|G/-|frameshift_variant	102.0615471778698	0.03709830720253279	6				NaN	NaN	0	NaN	5961	3059	9020
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9023	25.683	NaN	12106	30	0	921.1	0.106	+			8585	EAYTDHATY	9	87	535.7244879085509	1069.4344228839018	2	535.7254638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EAYTDHATY_	ENSG00000196576|ENST00000359337|PLXNB2;PLXNB2|p.G308Vfs*83|1|0.39|ENSG00000196576|chr22:50289664-50289664|G/-|frameshift_variant;PLXNB2|p.G872Vfs*42|1|0.08|ENSG00000196576|chr22:50283401-50283401|C/-|frameshift_variant;PLXNB2|p.L1362Rfs*32|1|0.1|ENSG00000196576|chr22:50280578-50280579|CA/-|frameshift_variant;PLXNB2|p.V873Cfs*66|1|0.2|ENSG00000196576|chr22:50283400-50283401|-/C|frameshift_variant;PLXNB2|p.V928Cfs*3|1|0.71|ENSG00000196576|chr22:50283084-50283084|C/-|frameshift_variant	63.30626980617807	0.18605348971131092	6				NaN	NaN	0	NaN	5962	3059	9020
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9024	25.685	NaN	15390	30	0	2599.2	0.106				-1	 	0	72	485.24030361982034	968.4660543064407	2	485.2408142089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5963	3059	9020
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9025	25.687	NaN	13119	30	0	1604.2	0.106	+			48282	VTDPSIPIRK	10	74	375.8921090320456	1124.6544976963369	3	375.8922424316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTDPSIPIRK_	ELF4|p.A554Pfs*13|1|0.32|ENSG00000102034|chrX:130067053-130067053|C/-|frameshift_variant;ELF4|p.Q341Rfs*30|2|0.25|ENSG00000102034|chrX:130069466-130069466|G/-|frameshift_variant;ENSG00000102034|ENST00000308167|ELF4	45.02220120713402	0.5028680121232791	6				NaN	NaN	0	NaN	5964	3059	9020
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9026	25.689	NaN	7075.7	30	0	2059.4	0.038				-1	TSEPQHLLVM	10	64	390.86526658694925	1169.5739703610477	3	390.86553955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_TSEPQHLLVM(Oxidation (M))_	ENSG00000163399|ENST00000295598|ATP1A1;nc|ENSG00000163399|P05023-2|ATP1A1;nc|ENSG00000163399|P05023-3|ATP1A1;nc|ENSG00000163399|P05023-4|ATP1A1	27.047317107675042	0.6589519614906109	6				NaN	NaN	0	NaN	5965	3059	9020
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9027	25.689	NaN	3613.8	30	0	323.83	0.142	+			39921	STMDKFNVTK	10	77	585.793583258245	1169.57261358329	2	585.7950439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STMDKFNVTK_	ENSG00000196187|ENST00000366835|TMEM63A	56.632244143249146	0.3964695498866976	6				NaN	NaN	0	NaN	5966	3059	9020
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9045	25.728	NaN	71381	30	0	24293	0.214			+	10196	ETDLPRGPHH	10	95	579.784572671493	1157.554592409786	2	579.7849731445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ETDLPRGPHH_	REV__ENST00000561457.2_1_9:139007800-139008082:-|nuORF	56.72105179125745	0.3956618550748046	6				NaN	NaN	0	NaN	5981	3062	9044
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9046	25.732	NaN	12703	30	0	1803	0.106	+			780	AEFAERSVA	9	73	490.2451758368649	978.4757987405299	2	490.2455139160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEFAERSVA_	CON__Q3SX28;ENSG00000143549|ENST00000651641|TPM3;ENSG00000198467|ENST00000645482|TPM2;ENST00000397772.2_1_20:32500135-32500381:-|nuORF;ENST00000469717.5_1_1:154130117-154143232:-|nuORF;ENST00000600996.1_1_19:42012510-42012810:+|nuORF;nc|ENSG00000143549|P06753-2|TPM3;nc|ENSG00000143549|P06753-3|TPM3;nc|ENSG00000143549|P06753-4|TPM3;nc|ENSG00000143549|P06753-5|TPM3;nc|ENSG00000143549|P06753-6|TPM3;nc|ENSG00000143549|P06753-7|TPM3;nc|ENSG00000198467|P07951-2|TPM2;nc|ENSG00000198467|P07951-3|TPM2;TPM3|p.R239H|1|0.1|ENSG00000143549|chr1:154170459-154170459|C/T|missense_variant	82.83050618871818	0.08530945204495013	6				NaN	NaN	0	NaN	5982	3062	9044
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9047	25.734	NaN	24297	30	0	4445.8	0.106			+	25844	LSEKRLSN	8	100	473.77114396202495	945.5277349908499	2	473.7711181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSEKRLSN_	REV__ENSG00000164074|ENST00000645843|ABHD18;REV__ENST00000473040.6_1_4:128905516-128956965:+|nuORF;REV__nc|ENSG00000164074|Q0P651-2|ABHD18;REV__nc|ENSG00000164074|Q0P651-3|ABHD18;REV__nc|ENSG00000164074|Q0P651-4|ABHD18;REV__nc|ENSG00000164074|Q0P651|ABHD18	68.78682469695295	0.41700713582915416	6				NaN	NaN	0	NaN	5983	3062	9044
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9048	25.735	NaN	6838.8	30	0	518.4	0.106			+	25865	LSFIGGEIKS	10	73	525.7952813335586	1049.576009733917	2	525.819091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSFIGGEIKS_	REV__ENST00000492310.5_1_7:43153648-43477745:+|nuORF	72.87924865735499	0.25379688738724415	6				NaN	NaN	0	NaN	5984	3062	9044
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9049	25.737	NaN	7905.4	30	0	921.58	0.106			+	8820	EELIKGMKI	9	76	530.8083545068042	NaN	0	531.2777099609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EELIKGMKI_	REV__tr|U7SGH6|U7SGH6_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02206PE=4SV=1	38.80614096846853	0.28164298475537564	6				NaN	NaN	0	NaN	5985	3062	9044
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9050	25.739	NaN	10042	30	0	1365.2	0.036	+			40443	STVNKWTLK	9	70	538.8081840796049	1075.6018152260096	2	539.822509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STVNKWTLK_	ENSG00000114742|ENST00000302313|WDR48;nc|ENSG00000114742|Q8TAF3-3|WDR48;nc|ENSG00000114742|Q8TAF3-4|WDR48	33.921630207806714	0.48623198279849766	6				NaN	NaN	0	NaN	5986	3062	9044
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9051	25.74	NaN	19542	30	0	1788.6	0.139				-1	 	0	85	476.75789843909	951.50124394498	2	476.75811767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5987	3062	9044
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9064	25.859	NaN	24276	30	0	2556.2	0.215	+			47792	VSIEAGSAVGK	11	84	509.2814436054053	1016.5483342776106	2	509.28216552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSIEAGSAVGK_	ENSG00000176945|ENST00000447234|MUC20;ENST00000457750.1_1_3:195341833-195346985:+|nuORF;nc|ENSG00000176945|Q8N307-3|MUC20	183.72194652814687	5.7103426921105755E-06	6				NaN	NaN	0	NaN	5997	3065	9063
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9065	25.863	NaN	20676	30	0	2764.1	0.106	+			23055	KVTEGSFVYK	10	87	579.3128483608674	1156.6111437885347	2	579.3140869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVTEGSFVYK_	ENSG00000057608|ENST00000380191|GDI2;GDI2|p.S222Afs*20|1|0.1|ENSG00000057608|chr10:5785197-5785197|T/-|frameshift_variant	154.0112374973812	0.007783311651969589	6				NaN	NaN	0	NaN	5998	3065	9063
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9066	25.865	NaN	15474	30	0	1643.5	0.106	+			40444	STVNKWTLK	9	79	538.8081840796049	1075.6018152260096	2	538.8090209960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STVNKWTLK_	ENSG00000114742|ENST00000302313|WDR48;nc|ENSG00000114742|Q8TAF3-3|WDR48;nc|ENSG00000114742|Q8TAF3-4|WDR48	180.09051358498644	0.0012869539350500664	6				NaN	NaN	0	NaN	5999	3065	9063
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9067	25.867	NaN	25697	30	0	9194.5	0.106	+			42695	TCTAAHPEL	9	76	471.7204712549666	941.4263895767332	2	471.7208557128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TCTAAHPEL_	nc|ENSG00000211890|P01877-1|IGHA2;nc|ENSG00000211890|P01877|IGHA2	113.41158876095287	0.025516849225023126	6				NaN	NaN	0	NaN	6000	3065	9063
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9068	25.869	NaN	26324	30	0	4290.5	0.106	+			40086	STNSFALNK	9	96	491.2527027229858	980.4908525127717	2	491.2533874511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STNSFALNK_	BPTF|p.D2844Afs*20|1|0.08|ENSG00000171634|chr17:67959766-67959767|-/C|frameshift_variant;BPTF|p.K2718Nfs*36|3|0.12|ENSG00000171634|chr17:67948150-67948150|A/-|frameshift_variant;ENSG00000171634|ENST00000306378|BPTF;ENST00000579209.1_1_17:62758032-62758825:-|nuORF;nc|ENSG00000171634|Q12830-4|BPTF;nc|ENSG00000171634|Q12830|BPTF	93.1432384553994	0.056003526918089595	6				NaN	NaN	0	NaN	6001	3065	9063
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9069	25.87	NaN	31639	30	0	4227.6	0.033			+	29153	NVGCDMAL	8	91	440.1877085403982	878.3608641475964	2	440.1883239746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_NVGC(Carbamidomethyl (C))DMAL_	REV__ENSG00000165140|ENST00000375326|FBP1;REV__FBP1|p.G294Efs*11|1|0.11|ENSG00000165140|chr9:94603517-94603517|C/-|frameshift_variant	53.351449002276354	0.5676011784961348	6				NaN	NaN	0	NaN	6002	3065	9063
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9070	25.871	NaN	115480	30	0	32906	0.139				-1	 	0	87	461.2655181749226	920.5164834166452	2	461.26593017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6003	3065	9063
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9088	25.909	NaN	52124	30	0	9316.3	0.214				-1	 	0	84	503.7688628595956	1005.5231727859912	2	503.76934814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6018	3068	9087
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9089	25.912	NaN	15309	30	0	3725.1	0.106	+			46941	VIYNEQMASK	10	83	591.7939833248952	1181.5734137165903	2	591.7948608398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VIYNEQMASK_	ENSG00000185432|ENST00000332160|METTL7A	192.63874173313192	8.391941956668264E-06	6				NaN	NaN	0	NaN	6019	3068	9087
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9090	25.914	NaN	15945	30	0	3847.9	0.106				-1	 	0	75	577.3191094909091	1152.6236660486181	2	577.320068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6020	3068	9087
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9091	25.916	NaN	14329	30	0	1216.6	0.106	+			17809	IEVENKNNL	9	89	536.7842197058986	1071.5538864785972	2	536.7855834960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IEVENKNNL_	ENSG00000173960|ENST00000309033|UBXN2A;UBXN2A|p.T250Nfs*5|1|0.33|ENSG00000173960|chr2:23999829-23999830|-/A|frameshift_variant	96.0336014099291	0.047854655524928534	6				NaN	NaN	0	NaN	6021	3068	9087
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9092	25.918	NaN	13228	30	0	1160.7	0.106	+			42707	TDAVVKHVL	9	88	491.28943781402904	980.5643226948581	2	491.28997802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TDAVVKHVL_	ENSG00000122218|ENST00000241704|COPA;nc|ENSG00000122218|P53621-2|COPA	90.36981228632155	0.0638227155548745	6				NaN	NaN	0	NaN	6022	3068	9087
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9093	25.92	NaN	40684	30	0	3177.7	0.035	+			12157	GAIKVFVNK	9	96	488.3023091576673	974.5900653821346	2	488.30242919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GAIKVFVNK_	ENSG00000131725|ENST00000254029|WDR44;nc|ENSG00000131725|Q5JSH3-2|WDR44;nc|ENSG00000131725|Q5JSH3-4|WDR44;WDR44|p.F898L|1|0.26|ENSG00000131725|chrX:118448939-118448939|C/A|missense_variant	93.19546047674547	0.05585629608842056	6				NaN	NaN	0	NaN	6023	3068	9087
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9094	25.92	NaN	12486	30	0	3861.5	0.138				-1	 	0	70	444.2503176283706	886.4860823235413	2	444.2506103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6024	3068	9087
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9112	25.96	NaN	77181	30	0	35490	0.215				-1	 	0	79	417.23426624867267	1248.680969346218	3	417.23480224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6039	3071	9111
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9113	25.963	NaN	23038	30	0	3793.2	0.106	+			20757	KHANIVTLH	9	83	516.8006121842856	1031.586671435371	2	516.8013916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KHANIVTLH_	CDK18|p.T391Qfs*8|1|0.36|ENSG00000117266|chr1:205529327-205529327|C/-|frameshift_variant;ENSG00000059758|ENST00000261211|CDK17;ENSG00000102225|ENST00000357227|CDK16;ENSG00000117266|ENST00000429964|CDK18;ENST00000428400.5_1_X:47082893-47085639:+|nuORF;ENST00000476153.6_1_1:205492708-205496295:+|nuORF;ENST00000504648.5_1_1:205492597-205500503:+|nuORF;ENST00000505932.5_1_1:205492708-205498898:+|nuORF;ENST00000522234.5_1_X:47078210-47085639:+|nuORF;nc|ENSG00000059758|Q00537-2|CDK17;nc|ENSG00000102225|Q00536-2|CDK16;nc|ENSG00000102225|Q00536-3|CDK16;nc|ENSG00000117266|Q07002-3|CDK18	44.116797842482775	0.37197099687881774	6				NaN	NaN	0	NaN	6040	3071	9111
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9114	25.965	NaN	22220	30	0	8890.5	0.106	+			32526	QVQVVLNQK	9	79	528.3134400260699	1054.6123271189397	2	528.3143920898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QVQVVLNQK_	ENSG00000140688|ENST00000327237|RUSF1;ENST00000568491.1_1_16:31502158-31504599:-|nuORF;nc|ENSG00000140688|Q96GQ5-2|RUSF1	152.47061609516894	0.006293267927334181	6				NaN	NaN	0	NaN	6041	3071	9111
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9115	25.967	NaN	32663	30	0	4193.5	0.106	+			7338	DAVRTKMVY	9	80	541.7859699709225	1081.5573870086448	2	541.787353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DAVRTKMVY_	ENSG00000149100|ENST00000531120|EIF3M;nc|ENSG00000149100|Q7L2H7-2|EIF3M	93.1432384553994	0.056003526918089595	6				NaN	NaN	0	NaN	6042	3071	9111
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9116	25.969	NaN	7074.9	30	0	842.44	0.106	+			5652	AVDGNTVELK	10	83	523.2794996030871	1044.544446272974	2	523.2803344726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVDGNTVELK_	ENSG00000177733|ENST00000314940|HNRNPA0	92.23892857375223	0.11825556496531454	6				NaN	NaN	0	NaN	6043	3071	9111
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9117	25.971	NaN	18662	30	0	3624.7	0.033				-1	 	0	83	451.731949209249	901.4493454852981	2	451.73248291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6044	3071	9111
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9118	25.971	NaN	30290	30	0	7633.2	0.14	+			40293	STSSLFNLQ	9	85	498.7520572665962	995.4895615999924	2	499.2510681152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STSSLFNLQ_	chr17:58415759-58417017|443|15.45|0.8|4.27|-|ENST00000577716|RNF43,RNF43;ENSG00000108375|ENST00000407977|RNF43;nc|ENSG00000108375|Q68DV7-2|RNF43;nc|ENSG00000108375|Q68DV7-3|RNF43;nc|ENSG00000108375|Q68DV7-4|RNF43;RNF43|p.G659Vfs*41|19|0.36|ENSG00000108375|chr17:58357800-58357800|C/-|frameshift_variant	53.351449002276354	0.2690372970092375	6				NaN	NaN	0	NaN	6045	3071	9111
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9136	26.011	NaN	17022	30	0	1944.1	0.214	+			19585	KDDAKEVVA	9	83	487.76061955265124	973.5066861721025	2	487.7610168457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KDDAKEVVA_	tr|U7T0U8|U7T0U8_FUSNUTranslationinitiationfactorIF-2OS=FusobacteriumnucleatumCTI-5OX=1316586GN=infBPE=3SV=1	49.536043120802724	0.308405419312776	6				NaN	NaN	0	NaN	6060	3074	9135
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9137	26.014	NaN	11707	30	0	1177.7	0.106			+	26164	LSQVAKEI	8	78	444.26335666676044	NaN	0	444.2632751464844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSQVAKEI_	REV__ENSG00000162704|ENST00000359856|ARPC5;REV__ENST00000462965.1_1_1:183596669-183602348:-|nuORF;REV__ENST00000602490.1_1_1:183599580-183599799:-|nuORF;REV__nc|ENSG00000162704|O15511-2|ARPC5	104.74654710444128	1.7418937515398478	6				NaN	NaN	0	NaN	6061	3074	9135
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9138	26.016	NaN	15961	30	0	4644.4	0.106				-1	 	0	76	372.8849114184969	1115.6329048556909	3	372.88519287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6062	3074	9135
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9139	26.018	NaN	16656	30	0	1176	0.106	+			50690	YEENAKAEL	9	89	533.7559254897852	1065.4972980463704	2	533.756591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YEENAKAEL_	BBS2|p.F575Lfs*8|1|0.19|ENSG00000125124|chr16:56497815-56497815|A/-|frameshift_variant;ENSG00000125124|ENST00000245157|BBS2	129.42129120953632	0.01549634589885217	6				NaN	NaN	0	NaN	6063	3074	9135
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9140	26.02	NaN	6063	30	0	1381.3	0.106	+			22481	KTNAIISLK	9	68	494.31301402121255	986.6114751092251	2	494.3133850097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KTNAIISLK_	ENST00000539028.1_1_12:10010098-10010200:-|nuORF	63.42647028704847	0.1850514934184437	6				NaN	NaN	0	NaN	6064	3074	9135
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9141	26.022	NaN	49808	30	0	17963	0.035	+			14985	GTMTGMLYK	9	93	509.24013080469973	1016.4657086761995	2	509.2416687011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_GTM(Oxidation (M))TGMLYK_	ENSG00000178440|ENST00000651763|TIMM23B-AGAP6;ENSG00000204152|ENST00000651259|TIMM23B;ENSG00000265354|ENST00000580018|TIMM23;nc|ENSG00000204152|Q5SRD1-2|TIMM23B	118.74307786436346	0.02196067127630568	6				NaN	NaN	0	NaN	6065	3074	9135
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9142	26.022	NaN	11729	30	0	725.06	0.141	+			49948	VYVSRPSHF	9	78	546.2843507515239	1090.5541485698477	2	546.284912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VYVSRPSHF_	ENSG00000170581|ENST00000314128|STAT2;ENST00000556539.5_1_12:56737175-56743495:-|nuORF;nc|ENSG00000170581|P52630-4|STAT2	76.16968421966216	0.11411088698345859	6				NaN	NaN	0	NaN	6066	3074	9135
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9160	26.062	NaN	77498	30	0	34058	0.213			+	43682	TKEFDKVML	9	98	370.8665610565345	1109.5778537698036	3	370.866943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TKEFDKVML_	REV__tr|U7SG87|U7SG87_FUSNUAlanyl-transferRNAsynthetasesfamilyprofiledomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02220PE=4SV=1	54.776311868738084	0.25715957988447635	6				NaN	NaN	0	NaN	6081	3077	9159
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9161	26.065	NaN	112810	30	0	30157	0.106				-1	 	0	100	413.91461222807567	1238.722007284427	3	413.9149475097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6082	3077	9159
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9162	26.067	NaN	19886	30	0	2287	0.106	+			49922	VYVDKVEKM	9	81	555.7976603824975	NaN	0	555.7971801757812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYVDKVEKM_	AMOT|p.L850Cfs*59|1|0.13|ENSG00000126016|chrX:112779606-112779606|G/-|frameshift_variant;ENSG00000126016|ENST00000371959|AMOT;nc|ENSG00000126016|Q4VCS5-2|AMOT	99.01295224348159	0.023427377858318825	6				NaN	NaN	0	NaN	6083	3077	9159
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9163	26.069	NaN	60873	30	0	6600.7	0.106	+			40406	STVGAGAYAYK	11	106	544.273967217423	1086.5333815016459	2	544.27490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STVGAGAYAYK_	ENSG00000156709|ENST00000287295|AIFM1;nc|ENSG00000156709|O95831-4|AIFM1	172.24860141594272	2.2155304511481823E-05	6				NaN	NaN	0	NaN	6084	3077	9159
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9164	26.071	NaN	49186	30	0	13869	0.106	+			42669	TAWCLLGLK	9	93	502.7840562270428	1003.5535595208856	2	502.7845764160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TAWCLLGLK_	ENST00000378460.6_1_11:47800565-47800655:-|nuORF	90.36981228632155	0.0638227155548745	6				NaN	NaN	0	NaN	6085	3077	9159
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9165	26.073	NaN	10329	30	0	1131.8	0.037	+			28766	NPEEHATYY	9	81	562.237725004652	1122.460897076104	2	562.2383422851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NPEEHATYY_	ENSG00000083097|ENST00000349129|DOP1A	118.74307786436346	0.02196067127630568	6				NaN	NaN	0	NaN	6086	3077	9159
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9166	26.073	NaN	23622	30	0	4392.3	0.14	+			19982	KEHVIEAL	8	83	469.76868628581207	937.5228196384242	2	469.7685241699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KEHVIEAL_	ENSG00000147403|ENST00000369817|RPL10;ENST00000431607.1_1_9:119942983-119943337:-|nuORF;ENST00000444036.1_1_21:34213912-34214044:-|nuORF;ENST00000467168.5_1_X:153626860-153629039:+|nuORF;ENST00000491035.5_1_X:153628724-153629192:+|nuORF;RPL10L|p.E145K|1|0.08|ENSG00000165496|chr14:46651304-46651304|C/T|missense_variant	85.16082228582465	0.29211966821764696	6				NaN	NaN	0	NaN	6087	3077	9159
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9184	26.112	NaN	131410	30	0	73865	0.15	+			30625	QASDVSVKY	9	81	498.7520572665962	995.4895615999924	2	498.75347900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QASDVSVKY_	ENSG00000047410|ENST00000367478|TPR;nc|ENSG00000047410|P12270-2|TPR;TPR|p.E1141Dfs*29|1|0.08|ENSG00000047410|chr1:186344085-186344086|-/CAGGTAAA|frameshift_variant;TPR|p.G216Rfs*3|1|0.34|ENSG00000047410|chr1:186362887-186362888|-/T|frameshift_variant;TPR|p.P2083Qfs*3|1|0.31|ENSG00000047410|chr1:186323735-186323735|G/-|frameshift_variant;TPR|p.T2133Lfs*63|1|0.03|ENSG00000047410|chr1:186322382-186322383|-/GTACTAATAAG|frameshift_variant;TPR|p.V1142Efs*26|1|0.08|ENSG00000047410|chr1:186344083-186344084|-/TT|frameshift_variant	159.27591364854348	0.004707062175358555	6				NaN	NaN	0	NaN	6102	3080	9183
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9185	26.114	NaN	27637	30	0	3552.6	0.106	+			4419	ATIEEAYSR	9	86	520.2549995449951	1038.4954461567902	2	520.256591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATIEEAYSR_	ENSG00000157107|ENST00000430046|FCHO2;nc|ENSG00000157107|Q0JRZ9-2|FCHO2;nc|ENSG00000157107|Q0JRZ9-3|FCHO2	155.5846463517096	0.005567437401040498	6				NaN	NaN	0	NaN	6103	3080	9183
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9186	26.116	NaN	19845	30	0	1441.3	0.106	+			34993	SAASEQHVF	9	92	488.2301318603704	NaN	0	488.2300720214844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAASEQHVF_	DHX38|p.A739Pfs*17|1|0.38|ENSG00000140829|chr16:72105086-72105086|G/-|frameshift_variant;DHX38|p.G603Efs*22|1|0.36|ENSG00000140829|chr16:72103767-72103767|G/-|frameshift_variant;DHX38|p.G697Wfs*16|1|0.38|ENSG00000140829|chr16:72104557-72104558|-/T|frameshift_variant;ENSG00000140829|ENST00000268482|DHX38;nc|ENSG00000140829|Q92620-2|DHX38	90.60085204095205	0.040385177724871185	6				NaN	NaN	0	NaN	6104	3080	9183
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9187	26.118	NaN	24101	30	0	2167.2	0.106				-1	 	0	74	416.2134314465392	830.4123099598784	2	416.2138366699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6105	3080	9183
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9188	26.12	NaN	20173	30	0	5562.6	0.106				-1	 	0	82	472.2759882840161	942.5374236348322	2	472.2761535644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6106	3080	9183
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9189	26.122	NaN	6901.3	30	0	450.09	0.106	+			23867	LDEVKRTLA	9	79	522.8065242987508	NaN	0	522.8063354492188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LDEVKRTLA_	ENSG00000126012|ENST00000375401|KDM5C;KDM5C|p.L1399Wfs*5|2|0.16|ENSG00000126012|chrX:53193560-53193560|G/-|frameshift_variant;nc|ENSG00000126012|P41229-2|KDM5C;nc|ENSG00000126012|P41229-3|KDM5C;nc|ENSG00000126012|P41229-4|KDM5C;nc|ENSG00000126012|P41229-5|KDM5C	45.97224482568171	0.23445038899310136	6				NaN	NaN	0	NaN	6107	3080	9183
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9190	26.123	NaN	9263.2	30	0	643.05	0.036			+	30532	QAIVKNTLKG	10	88	536.3289803800054	1070.6434078268107	2	536.3299560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QAIVKNTLKG_	REV__tr|U7SJ44|U7SJ44_FUSNUToxin-antitoxinsystemYwqKfamilyantitoxinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02085PE=4SV=1	52.936696900407355	0.4300801048568001	6				NaN	NaN	0	NaN	6108	3080	9183
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9208	26.161	NaN	81458	30	0	10153	0.214	+			45758	VAEENTRVL	9	99	515.7805046932999	NaN	0	515.7803955078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VAEENTRVL_	ENSG00000156256|ENST00000399976|USP16;ENST00000485067.1_1_21:30426080-30426505:+|nuORF;nc|ENSG00000156256|Q9Y5T5-2|USP16;nc|ENSG00000156256|Q9Y5T5-3|USP16;nc|ENSG00000156256|Q9Y5T5-4|USP16	123.20810148215591	0.0016355521601317592	6				NaN	NaN	0	NaN	6123	3083	9207
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9209	26.164	NaN	15659	30	0	3456.3	0.106	+			27210	MEHAMETM	8	81	490.1870162762386	978.3594796192772	2	490.1878967285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MEHAMETM_	ENSG00000197747|ENST00000368811|S100A10;ENST00000478348.1_1_1:151957748-151958706:-|nuORF;ENST00000478574.5_1_1:151956596-151958706:-|nuORF	102.7733458925114	0.2491487235419157	6				NaN	NaN	0	NaN	6124	3083	9207
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9210	26.167	NaN	13162	30	0	6271.7	0.106	+			8800	EEKKIKVIL	9	63	550.3575377801827	1098.7005226271654	2	550.3585205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EEKKIKVIL_	ENSG00000162434|ENST00000342505|JAK1;JAK1|p.K860Nfs*16|3|0.29|ENSG00000162434|chr1:64841314-64841314|T/-|frameshift_variant	68.78682469695295	0.14603441672067394	6				NaN	NaN	0	NaN	6125	3083	9207
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9211	26.168	NaN	20664	30	0	7040.4	0.106			+	32776	RARSRAANRPW	11	74	447.58508348625975	1339.7334210589793	3	447.5856018066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RARSRAANRPW_	REV__ENST00000378787.7_2_13:46946730-46961377:-|nuORF	29.550750289552195	0.6798279264880025	6				NaN	NaN	0	NaN	6126	3083	9207
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9212	26.17	NaN	9022.1	30	0	1289.1	0.106	+			8892	EETGAKISV	9	72	467.2478090872865	932.481065241373	2	467.24798583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EETGAKISV_	ENSG00000121774|ENST00000327300|KHDRBS1;ENST00000307714.12_1_1:32479575-32503673:+|nuORF;KHDRBS1|p.A312Gfs*56|1|0.28|ENSG00000121774|chr1:32037857-32037858|-/G|frameshift_variant;KHDRBS1|p.P237Hfs*19|1|0.32|ENSG00000121774|chr1:32033269-32033269|C/-|frameshift_variant;KHDRBS1|p.P336Hfs*4|1|0.41|ENSG00000121774|chr1:32037932-32037932|C/-|frameshift_variant;nc|ENSG00000121774|Q07666-2|KHDRBS1	90.60085204095205	0.06317133949006545	6				NaN	NaN	0	NaN	6127	3083	9207
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9213	26.172	NaN	20677	30	0	4185.4	0.034				-1	 	0	76	456.76605230354306	911.5175516738861	2	456.7667236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6128	3083	9207
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9214	26.173	NaN	4434.1	30	0	712.23	0.141				-1	MDTVCARLW	9	74	555.7575354490332	NaN	0	555.7578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_M(Oxidation (M))DTVCARLW_	ENST00000469080.5_1_X:47104878-47106896:+|nuORF	40.77816245573522	0.2702456086868081	6				NaN	NaN	0	NaN	6129	3083	9207
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9232	26.212	NaN	116760	30	0	24729	0.175				-1	 	0	76	485.2383211714815	968.462089409763	2	485.23870849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6144	3086	9231
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9233	26.215	NaN	13427	30	0	4156.8	0.106			+	-1	IMWSFSARTT	10	70	405.86631624150743	1214.5771193247224	3	405.86669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_IM(Oxidation (M))WSFSARTT_	REV__ENST00000524821.5_2_8:145753431-145754227:-|nuORF	28.081489160057373	0.6505064946289502	6				NaN	NaN	0	NaN	6145	3086	9231
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9234	26.217	NaN	9434	30	0	1246.3	0.106	+			45873	VANGRIQSL	9	77	479.2766515546669	956.5387501761338	2	479.2769775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VANGRIQSL_	ENSG00000065882|ENST00000698857|TBC1D1;ENST00000401554.5_1_4:38112345-38138953:+|nuORF;ENST00000405444.3_1_4:38134403-38138953:+|nuORF;ENST00000407365.5_1_4:38113700-38138953:+|nuORF;nc|ENSG00000065882|Q86TI0-2|TBC1D1;nc|ENSG00000065882|Q86TI0|TBC1D1	90.60085204095205	0.06317133949006545	6				NaN	NaN	0	NaN	6146	3086	9231
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9235	26.219	NaN	14034	30	0	1560.2	0.106	+			796	AEFLDKHVT	9	80	530.2770583983146	1058.539563863429	2	530.2775268554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEFLDKHVT_	ENSG00000079459|ENST00000220584|FDFT1;nc|ENSG00000079459|P37268-2|FDFT1;nc|ENSG00000079459|P37268-3|FDFT1;nc|ENSG00000079459|P37268-4|FDFT1	96.0336014099291	0.047854655524928534	6				NaN	NaN	0	NaN	6147	3086	9231
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9236	26.221	NaN	5437.9	30	0	1506	0.106	+			48491	VTMKQICKKVY	11	67	447.58508348625975	1339.7334210589793	3	447.5851745605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTMKQICKKVY_	DEK|p.E372Sfs*2|1|0.2|ENSG00000124795|chr6:18226177-18226177|T/-|frameshift_variant;ENSG00000124795|ENST00000652689|DEK;nc|ENSG00000124795|P35659-2|DEK	25.125986553469783	0.7262400895305658	6				NaN	NaN	0	NaN	6148	3086	9231
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9237	26.223	NaN	9459.5	30	0	3837.5	0.106	+			9541	ELDTATWNAVL	11	53	411.5427613723523	1231.6064547172568	3	411.54315185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ELDTATWNAVL_	ENSG00000124120|ENST00000262605|TTPAL;ENST00000461134.1_1_20:43115184-43118179:+|nuORF	29.550750289552195	0.6798279264880025	6				NaN	NaN	0	NaN	6149	3086	9231
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9238	26.224	NaN	22411	30	0	14247	0.037				-1	 	0	65	364.55682562863694	1090.6486474861108	3	364.5571594238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6150	3086	9231
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9256	26.259	NaN	84732	30	0	13470	0.158	+			48507	VTNDGATILK	10	88	516.2886087771965	1030.5626646211929	2	516.2901000976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTNDGATILK_	ENSG00000166226|ENST00000299300|CCT2;ENST00000546859.5_1_12:69979244-69981900:+|nuORF;ENST00000550455.5_1_12:69979244-69981425:+|nuORF;ENST00000550638.5_1_12:69979244-69982049:+|nuORF;ENST00000551620.5_1_12:69979244-69983508:+|nuORF;nc|ENSG00000166226|P78371-2|CCT2	201.61192446435922	3.4460847431379217E-06	6				NaN	NaN	0	NaN	6165	3089	9255
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9257	26.262	NaN	22536	30	0	2211.7	0.106	+			26600	LTYARGEEA	9	97	505.2504033386062	1008.4862537440124	2	505.25115966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LTYARGEEA_	ENSG00000197119|ENST00000359232|SLC25A29;nc|ENSG00000197119|Q8N8R3-3|SLC25A29	68.78682469695295	0.14603441672067394	6				NaN	NaN	0	NaN	6166	3089	9255
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9258	26.264	NaN	51699	30	0	14612	0.106				-1	 	0	101	401.2447686048548	800.4749842765096	2	401.2449951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6167	3089	9255
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9259	26.266	NaN	61860	30	0	12572	0.106			+	37152	SIVEDTDVFI	10	94	379.86073282290886	1136.5603690689265	3	379.8609924316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SIVEDTDVFI_	REV__tr|U7SST5|U7SST5_FUSNUHistidineammonia-lyaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=hutHPE=3SV=1	35.61828744233558	0.588957954432594	6				NaN	NaN	0	NaN	6168	3089	9255
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9260	26.268	NaN	6172.9	30	0	504.65	0.106	+			18776	ITQEMQTLK	9	79	546.2906381899513	1090.5667234467026	2	546.292236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ITQEMQTLK_	ENSG00000104133|ENST00000261866|SPG11;nc|ENSG00000104133|Q96JI7-2|SPG11;nc|ENSG00000104133|Q96JI7-3|SPG11	109.82975700811294	0.02917171107062681	6				NaN	NaN	0	NaN	6169	3089	9255
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9261	26.27	NaN	48118	30	0	5633.3	0.106	+			45590	TYNQKHSLF	9	91	569.2868954466921	1136.5592379601842	2	569.2882080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TYNQKHSLF_	ENSG00000165175|ENST00000614558|MID1IP1	154.1183686248401	0.005909203230691971	6				NaN	NaN	0	NaN	6170	3089	9255
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9262	26.271	NaN	8100.1	30	0	1343.7	0.036				-1	 	0	61	358.18876349944895	1071.544461098547	3	358.189208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6171	3089	9255
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9280	26.308	NaN	32985	30	0	4405.5	0.214	+			35584	SAYGSVKAY	9	100	473.23693643521614	944.4593199372323	2	473.2372131347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAYGSVKAY_	ENSG00000182718|ENST00000451270|ANXA2;ENST00000557937.5_1_15:60655071-60678274:-|nuORF;nc|ENSG00000182718|P07355-2|ANXA2;nc|ENSG00000231991|A6NMY6|ANXA2P2;NPTN-ANXA2|1|fusion	96.0336014099291	0.047854655524928534	6				NaN	NaN	0	NaN	6186	3092	9279
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9281	26.312	NaN	20916	30	0	3784.9	0.106			+	30057	PPYRSLVSP	9	98	508.28153984727186	1014.5485267613437	2	508.2821960449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PPYRSLVSP_	REV__ENSG00000169641|ENST00000302291|LUZP1;REV__LUZP1|p.F744Lfs*22|1|0.36|ENSG00000169641|chr1:23092030-23092030|A/-|frameshift_variant;REV__LUZP1|p.T938Nfs*5|1|0.29|ENSG00000169641|chr1:23091451-23091452|-/G|frameshift_variant;REV__LUZP1|p.V674Gfs*16|1|0.33|ENSG00000169641|chr1:23092241-23092242|-/C|frameshift_variant;REV__nc|ENSG00000169641|Q86V48-2|LUZP1;REV__nc|ENSG00000169641|Q86V48-3|LUZP1	76.7741389293348	0.11149722112137898	6				NaN	NaN	0	NaN	6187	3092	9279
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9282	26.314	NaN	10074	30	0	1667.9	0.106	+			12629	GEIGTKTTL	9	83	460.2579975487546	NaN	0	460.2580871582031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEIGTKTTL_	ENSG00000175792|ENST00000322623|RUVBL1	52.936696900407355	0.1864545979552969	6				NaN	NaN	0	NaN	6188	3092	9279
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9283	26.316	NaN	9027.8	30	0	856	0.106			+	8333	EAKRKLEAL	9	81	529.3217048291597	1056.6288567251192	2	529.3221435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EAKRKLEAL_	REV__ENSG00000144674|ENST00000361924|GOLGA4;REV__GOLGA4|p.N1805Kfs*18|1|0.11|ENSG00000144674|chr3:37327293-37327294|-/A|frameshift_variant;REV__GOLGA4|p.N1805Tfs*6|1|0.38|ENSG00000144674|chr3:37327294-37327294|A/-|frameshift_variant;REV__nc|ENSG00000144674|Q13439-3|GOLGA4;REV__nc|ENSG00000144674|Q13439-4|GOLGA4;REV__nc|ENSG00000144674|Q13439-5|GOLGA4	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	6189	3092	9279
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9284	26.317	NaN	33014	30	0	5907.1	0.106				-1	 	0	90	525.8036007538632	1049.5926485745263	2	525.8045043945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6190	3092	9279
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9285	26.319	NaN	33856	30	0	8177.9	0.036				-1	 	0	93	350.87147224031503	1049.5925873211452	3	350.87200927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6191	3092	9279
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9286	26.32	NaN	8817.7	30	0	2009.6	0.142	+			3059	ASFLPPSSVKK	11	70	387.5602854579827	1159.659026974148	3	387.560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASFLPPSSVKK_	ENSG00000104549|ENST00000265896|SQLE;SQLE|p.Y455Lfs*21|1|0.14|ENSG00000104549|chr8:125018642-125018643|-/T|frameshift_variant	45.908116695636124	0.4771019740774998	6				NaN	NaN	0	NaN	6192	3092	9279
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9304	26.359	NaN	69494	30	0	23583	0.215				-1	 	0	89	424.24726235323135	846.4799717732627	2	424.2475891113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6207	3095	9303
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9305	26.363	NaN	36909	30	0	6343.1	0.106			+	19544	KCGFFTHVY	9	92	579.7740953848235	1157.5336378364468	2	579.77490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_KC(Carbamidomethyl (C))GFFTHVY_	REV__ENSG00000165661|ENST00000358701|QSOX2	68.78682469695295	0.14603441672067394	6				NaN	NaN	0	NaN	6208	3095	9303
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9306	26.365	NaN	31773	30	0	9476.8	0.106			+	42183	SYVWNKET	8	75	513.7489148628598	1025.4832767925195	2	513.749755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SYVWNKET_	REV__ENST00000411625.2_1_9:127730575-127731109:-|nuORF	53.351449002276354	0.5676011784961348	6				NaN	NaN	0	NaN	6209	3095	9303
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9307	26.367	NaN	15977	30	0	5726.7	0.106			+	36725	SGVLLRHAR	9	55	336.87382334563347	1007.5996406371005	3	336.874267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SGVLLRHAR_	REV__ENST00000332810.3_1_15:89174144-89174384:+|nuORF	31.954861631926434	0.5046124803899898	6				NaN	NaN	0	NaN	6210	3095	9303
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9308	26.369	NaN	10802	30	0	4730.9	0.106	+			45407	TVVDQTTLMKK	11	82	421.90335952146324	1262.6882491645897	3	421.90386962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TVVDQTTLMKK_	ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;TRRAP-ASNS|1|fusion;TRRAP-ASNS|2|fusion;TRRAP|p.A1620Cfs*35|1|0.27|ENSG00000196367|chr7:98949499-98949500|-/G|frameshift_variant;TRRAP|p.I564Hfs*9|1|0.29|ENSG00000196367|chr7:98910389-98910390|-/G|frameshift_variant;TRRAP|p.K3443Sfs*19|1|0.28|ENSG00000196367|chr7:99004246-99004246|A/-|frameshift_variant;TRRAP|p.L291*|1|0.36|ENSG00000196367|chr7:98900691-98900691|T/-|frameshift_variant;TRRAP|p.P1292Lfs*17|1|0.44|ENSG00000196367|chr7:98933258-98933258|C/-|frameshift_variant;TRRAP|p.P1360Afs*14|1|0.05|ENSG00000196367|chr7:98935641-98935642|-/GCAAATAA|frameshift_variant	48.18798116849167	0.44590646720473764	6				NaN	NaN	0	NaN	6211	3095	9303
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9309	26.37	NaN	16083	30	0	1978	0.04			+	27572	MPFPEHMNQNC	11	79	449.8465328244338	1346.5177690735013	3	449.8472595214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MPFPEHMNQNC_	REV__ENSG00000104375|ENST00000419617|STK3;REV__ENST00000517832.1_1_8:99446484-99539107:-|nuORF;REV__ENST00000520440.1_1_8:99538957-99560377:-|nuORF;REV__nc|ENSG00000104375|Q13188-2|STK3;REV__STK3|p.N442Ifs*2|1|0.33|ENSG00000104375|chr8:98455993-98455993|T/-|frameshift_variant	24.231819034082204	0.7356191775841856	6				NaN	NaN	0	NaN	6212	3095	9303
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9310	26.371	NaN	9137.4	30	0	974.78	0.141				-1	 	0	81	547.302933143127	1092.591313353054	2	547.3038940429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6213	3095	9303
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9328	26.411	NaN	24283	30	0	6242.8	0.214	+			786	AEFAERTVA	9	77	497.2528864908007	992.4912200484014	2	497.25347900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEFAERTVA_	ENSG00000167460|ENST00000643579|TPM4;ENST00000368528.3_1_3:27674554-27675208:+|nuORF;ENST00000520239.1_1_8:70042334-70042577:+|nuORF;nc|ENSG00000167460|P67936-2|TPM4	112.41091882917199	0.026537921851008135	6				NaN	NaN	0	NaN	6228	3098	9327
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9329	26.414	NaN	24040	30	0	5419.8	0.106				-1	 	0	83	438.2628805599861	874.5112081867723	2	438.2632141113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6229	3098	9327
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9330	26.416	NaN	20717	30	0	2863.1	0.106	+			23004	KVSGDIFSR	9	101	504.7765990492062	1007.5386451652124	2	504.77716064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KVSGDIFSR_	ENSG00000181404|ENST00000696149|WASHC1;ENST00000400706.3_1_12:78799-87272:+|nuORF;ENST00000488147.1_1_1:18362-24778:-|nuORF;ENST00000557932.5_1_15:102506277-102513446:+|nuORF;ENST00000558686.5_1_15:102506217-102512799:+|nuORF;nc|ENSG00000185596|C4AMC7|WASH3P;nc|ENSG00000291134|Q6VEQ5|WASH2P	89.02883481214508	0.06760336634167786	6				NaN	NaN	0	NaN	6230	3098	9327
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9331	26.418	NaN	21081	30	0	4938.5	0.106			+	-1	TSLTHGIMY	9	86	519.7516395369024	NaN	0	519.7517700195312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_TSLTHGIM(Oxidation (M))Y_	REV__ENSG00000260314|ENST00000569591|MRC1	65.80317337860623	0.12456833308499304	6				NaN	NaN	0	NaN	6231	3098	9327
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9332	26.42	NaN	11298	30	0	3761.7	0.106			+	25204	LMKVGHPHCS	10	75	562.7705731582927	1123.5265933833853	2	562.7708129882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_LM(Oxidation (M))KVGHPHCS_	REV__ENSG00000164327|ENST00000357387|RICTOR;REV__nc|ENSG00000164327|Q6R327-3|RICTOR;REV__RICTOR|p.K678Nfs*14|1|0.2|ENSG00000164327|chr5:38959796-38959796|T/-|frameshift_variant;REV__RICTOR|p.S1495Pfs*13|1|0.05|ENSG00000164327|chr5:38945642-38945643|-/ATTCTGGG|frameshift_variant	84.9155231211612	0.16018353804806162	6				NaN	NaN	0	NaN	6232	3098	9327
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9333	26.422	NaN	16874	30	0	2970.9	0.034				-1	 	0	79	479.25290403092094	956.4912551286419	2	479.25347900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6233	3098	9327
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9334	26.422	NaN	13951	30	0	3279.3	0.143			+	5189	ATTLLFSAIR	10	62	364.88498355511393	1091.6331212655418	3	364.88525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATTLLFSAIR_	REV__ENST00000396081.5_1_7:35734046-35734373:-|nuORF	32.75053402867276	0.6123771875927935	6				NaN	NaN	0	NaN	6234	3098	9327
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9352	26.462	NaN	26614	30	0	4229.4	0.214	+			7502	DGKTIKLSG	9	91	459.7658148353748	917.5170767375496	2	459.7662353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DGKTIKLSG_	ENSG00000197976|ENST00000313871|AKAP17A;nc|ENSG00000292343|Q02040-2|AKAP17A;nc|ENSG00000292343|Q02040-3|AKAP17A	44.377184641726394	0.36891676396732553	6				NaN	NaN	0	NaN	6249	3101	9351
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9353	26.465	NaN	20739	30	0	9054	0.106				-1	ERASESALAM	10	80	540.7522147905992	1079.4898766479982	2	540.7535400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_ERASESALAM(Oxidation (M))_	ENSG00000169548|ENST00000302097|ZNF280A	45.97224482568171	0.49411383603842696	6				NaN	NaN	0	NaN	6250	3101	9351
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9354	26.468	NaN	20706	30	0	4173.6	0.106				-1	 	0	79	464.24204842008254	926.4695439069651	2	464.242431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6251	3101	9351
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9355	26.469	NaN	32631	30	0	5870	0.106	+			25752	LSAATVYNLL	10	104	355.5372556858181	1063.5899376576542	3	355.5376281738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSAATVYNLL_	CON__ENSEMBL:ENSBTAP00000024146	35.61828744233558	0.588957954432594	6				NaN	NaN	0	NaN	6252	3101	9351
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9356	26.471	NaN	11183	30	0	2301.6	0.106				-1	 	0	77	472.2759882840161	942.5374236348322	2	472.2763366699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6253	3101	9351
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9357	26.473	NaN	21399	30	0	3583.7	0.036	+			680	AEAKEKIYL	9	86	532.8024828711305	1063.5904128090608	2	532.8033447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEAKEKIYL_	ENSG00000133706|ENST00000394434|LARS1;ENST00000508667.5_1_5:145522961-145531505:-|nuORF;nc|ENSG00000133706|Q9P2J5-2|LARS1	72.87924865735499	0.12833875048249987	6				NaN	NaN	0	NaN	6254	3101	9351
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9358	26.474	NaN	20968	30	0	3769	0.146			+	-1	LRRPPCFSPL	10	77	414.8975978506139	1241.6709641520417	3	414.89794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_LRRPPC(Carbamidomethyl (C))FSPL_	REV__ENSG00000203786|ENST00000606109|KPRP	22.579656572578934	0.6954366826851017	6				NaN	NaN	0	NaN	6255	3101	9351
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9376	26.512	NaN	18957	30	0	3643.7	0.214	+			33184	REVEARYAL	9	85	553.8007719194959	1105.5869909057917	2	553.801513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_REVEARYAL_	ENSG00000111057|ENST00000388835|KRT18;ENST00000411618.1_1_9:30799684-30799825:-|nuORF;ENST00000549078.5_1_12:53344429-53346127:+|nuORF	75.04331003522576	0.118981335847003	6				NaN	NaN	0	NaN	6270	3104	9375
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9377	26.516	NaN	22314	30	0	3947.5	0.106	+			42894	TEHEKVAIL	9	78	520.2921288159839	1038.5697046987677	2	520.2927856445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEHEKVAIL_	ENSG00000142039|ENST00000269967|CCDC97	72.87924865735499	0.12833875048249987	6				NaN	NaN	0	NaN	6271	3104	9375
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9378	26.518	NaN	15099	30	0	1606.6	0.106				-1	 	0	74	514.8078438313963	1027.6011347295926	2	514.8086547851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6272	3104	9375
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9379	26.52	NaN	10573	30	0	1039.3	0.106	+			11713	FSAESSRSL	9	80	492.24272730642497	982.47090167965	2	492.2429504394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FSAESSRSL_	DOCK7|p.F1836Dfs*12|1|0.05|ENSG00000116641|chr1:62477795-62477796|-/TGTC|frameshift_variant;ENSG00000116641|ENST00000635253|DOCK7;nc|ENSG00000116641|Q96N67-2|DOCK7;nc|ENSG00000116641|Q96N67-3|DOCK7;nc|ENSG00000116641|Q96N67-4|DOCK7;nc|ENSG00000116641|Q96N67-5|DOCK7;nc|ENSG00000116641|Q96N67-6|DOCK7	109.43880257439609	0.029570636687953285	6				NaN	NaN	0	NaN	6273	3104	9375
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9380	26.521	NaN	13166	30	0	2785.5	0.106	+			40601	SVAGLSVTK	9	78	431.25526359550986	860.4959742578197	2	431.2556457519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVAGLSVTK_	ENSG00000197841|ENST00000492450|ZNF181;ZNF181|p.K248Sfs*36|1|0.29|ENSG00000197841|chr19:34741122-34741125|CAAA/-|frameshift_variant;ZNF181|p.V107Lfs*2|1|0.15|ENSG00000197841|chr19:34740695-34740695|A/-|frameshift_variant;ZNF181|p.Y52H|1|0.07|ENSG00000197841|chr19:34739546-34739546|T/C|missense_variant	82.7504851949679	0.08565546331141553	6				NaN	NaN	0	NaN	6274	3104	9375
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9381	26.523	NaN	8150.7	30	0	769.69	0.036	+			7278	DANRQISEY	9	71	548.2561531781306	1094.497753423061	2	548.2569580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DANRQISEY_	ENSG00000093167|ENST00000336686|LRRFIP2;ENST00000496479.5_1_3:37095344-37107514:-|nuORF;LRRFIP2|p.V671Sfs*2|1|0.12|ENSG00000093167|chr3:37054455-37054456|-/T|frameshift_variant;nc|ENSG00000093167|Q9Y608-2|LRRFIP2;nc|ENSG00000093167|Q9Y608-3|LRRFIP2;nc|ENSG00000093167|Q9Y608-4|LRRFIP2;nc|ENSG00000093167|Q9Y608-5|LRRFIP2	93.1432384553994	0.056003526918089595	6				NaN	NaN	0	NaN	6275	3104	9375
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9382	26.524	NaN	13886	30	0	3286.8	0.145	+			36954	SILRNPVTNK	10	68	381.2274104921397	1140.6604020766192	3	381.2276611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SILRNPVTNK_	ENSG00000131876|ENST00000254193|SNRPA1;ENST00000558036.5_1_15:101827046-101835383:-|nuORF;ENST00000558059.5_1_15:101827046-101835071:-|nuORF	35.15202426646627	0.5927656479315102	6				NaN	NaN	0	NaN	6276	3104	9375
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9400	26.563	NaN	280770	30	0	197690	0.214				-1	 	0	88	322.1931304220312	642.3717079108624	2	322.19354248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6291	3107	9399
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9401	26.567	NaN	54480	30	0	16133	0.106	+			22241	KTAEDAKDFFK	11	96	433.8904233086699	1298.6494405262097	3	433.89068603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTAEDAKDFFK_	ENSG00000123349|ENST00000334478|PFDN5;ENST00000552341.5_1_12:53691573-53693126:+|nuORF;ENST00000553171.1_1_12:53691669-53691972:+|nuORF;nc|ENSG00000123349|Q99471-3|PFDN5	82.83050618871818	0.12877585057862004	6				NaN	NaN	0	NaN	6292	3107	9399
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9402	26.569	NaN	22376	30	0	2305.1	0.106				-1	IWKNLCPA	8	95	501.26602430473025	1000.5174956762605	2	501.2664794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_IWKNLC(Carbamidomethyl (C))PA_	ARFGEF3|p.E1064Sfs*10|1|0.29|ENSG00000112379|chr6:138291869-138291869|C/-|frameshift_variant;ARFGEF3|p.F1125*|1|0.07|ENSG00000112379|chr6:138293997-138293998|TT/-|frameshift_variant;ARFGEF3|p.P355Hfs*11|1|0.44|ENSG00000112379|chr6:138255724-138255724|C/-|frameshift_variant;ENSG00000112379|ENST00000251691|ARFGEF3	54.76467175910256	0.5536104764165384	6				NaN	NaN	0	NaN	6293	3107	9399
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9403	26.571	NaN	27783	30	0	5105.7	0.106			+	33528	RKYPEIYALKC	11	72	461.92013283887934	1382.738569116838	3	461.9206848144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RKYPEIYALKC_	REV__ENSG00000132972|ENST00000255324|RNF17;REV__nc|ENSG00000132972|Q9BXT8-4|RNF17;REV__nc|ENSG00000132972|Q9BXT8-5|RNF17;REV__RNF17|p.C1288Vfs*21|1|0.1|ENSG00000132972|chr13:24861352-24861352|T/-|frameshift_variant	29.550750289552195	0.6798279264880025	6				NaN	NaN	0	NaN	6294	3107	9399
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9404	26.573	NaN	9666.3	30	0	978.05	0.106	+			35150	SAIASTKVM	9	66	454.24828308862567	906.4820132440514	2	454.2491149902344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SAIASTKVM_	ENSG00000104442|ENST00000276569|ARMC1;nc|ENSG00000104442|Q9NVT9-2|ARMC1	70.8162118820467	0.13725933411854815	6				NaN	NaN	0	NaN	6295	3107	9399
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9405	26.574	NaN	22192	30	0	8190.6	0.034	+			40187	STQTALTLK	9	76	481.7785254772558	961.5424980213116	2	481.779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STQTALTLK_	ENSG00000172123|ENST00000304905|SLFN12;SLFN12|p.V491Cfs*4|1|0.28|ENSG00000172123|chr17:35411605-35411605|T/-|frameshift_variant	195.57289506066198	5.204600901213804E-05	6				NaN	NaN	0	NaN	6296	3107	9399
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9406	26.575	NaN	8583.4	30	0	1407.5	0.139				-1	 	0	69	485.2383211714815	968.462089409763	2	485.23907470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6297	3107	9399
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9424	26.613	NaN	33517	30	0	5783.2	0.214	+			36539	SFHNIHNTF	9	84	558.7640523008145	1115.5135516684288	2	558.765380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SFHNIHNTF_	ENSG00000154473|ENST00000368865|BUB3;ENST00000481952.1_1_10:124921781-124922345:+|nuORF;nc|ENSG00000154473|O43684-2|BUB3	134.7655990226056	0.012935733000282069	6				NaN	NaN	0	NaN	6312	3110	9423
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9425	26.617	NaN	9525.6	30	0	1852.3	0.106	+			2746	AREEVIRLD	9	80	550.8063804530112	1099.5982079728224	2	550.8073120117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AREEVIRLD_	ENSG00000149292|ENST00000529221|TTC12;nc|ENSG00000149292|Q9H892-2|TTC12	47.95952297671804	0.32689736945648856	6				NaN	NaN	0	NaN	6313	3110	9423
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9426	26.619	NaN	15528	30	0	2054.3	0.106	+			10038	ESARQLQL	8	84	472.7617042639923	NaN	0	472.7613830566406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ESARQLQL_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	68.78682469695295	1.7418937515398478	6				NaN	NaN	0	NaN	6314	3110	9423
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9427	26.62	NaN	11178	30	0	2367.9	0.106	+			45274	TVQQPYGLK	9	85	517.2887167634254	NaN	0	517.2886962890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TVQQPYGLK_	ENSG00000104321|ENST00000262209|TRPA1;TRPA1|p.G505Rfs*7|1|0.38|ENSG00000104321|chr8:72055452-72055453|-/T|frameshift_variant;TRPA1|p.H380R|1|0.05|ENSG00000104321|chr8:72056972-72056972|T/C|missense_variant;TRPA1|p.L1023Ffs*15|1|0.42|ENSG00000104321|chr8:72023894-72023895|-/A|frameshift_variant;TRPA1|p.T673Hfs*23|1|0.45|ENSG00000104321|chr8:72046557-72046557|T/-|frameshift_variant	64.20726635412375	0.13137488984569443	6				NaN	NaN	0	NaN	6315	3110	9423
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9428	26.622	NaN	11038	30	0	1063.8	0.106	+			38938	SSQNFTLTK	9	77	513.2657260826121	1024.5168992320241	2	513.2672729492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSQNFTLTK_	CCNJL|p.V393Rfs*8|1|0.23|ENSG00000135083|chr5:160253509-160253510|-/G|frameshift_variant;ENSG00000135083|ENST00000257536|CCNJL;ENST00000377503.6_1_5:159681329-159707642:-|nuORF;nc|ENSG00000135083|Q8IV13|CCNJL	142.36107225718385	0.009372392051035914	6				NaN	NaN	0	NaN	6316	3110	9423
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9429	26.624	NaN	5149.1	30	0	725.88	0.037	+			31236	QHAPEKWEL	9	77	569.2868954466921	1136.5592379601842	2	569.2894897460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QHAPEKWEL_	tr|U7T655|U7T655_FUSNUDNApolymerasebacteriophage-typeOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00113PE=3SV=1	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	6317	3110	9423
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9430	26.625	NaN	9444.3	30	0	1059.4	0.14	+			51576	YYKSTSSAF	9	80	527.249023196954	NaN	0	527.2487182617188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YYKSTSSAF_	ENSG00000197093|ENST00000360039|GAL3ST4;ENST00000423751.2_1_7:99757553-99764836:-|nuORF;GAL3ST4|p.F427Sfs*17|1|0.32|ENSG00000197093|chr7:100160111-100160111|G/-|frameshift_variant;nc|ENSG00000197093|Q96RP7-2|GAL3ST4	127.46168284122857	0.0009793558177450096	6				NaN	NaN	0	NaN	6318	3110	9423
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9448	26.664	NaN	33941	30	0	4752.5	0.214	+			994	AEKKIEVVM	9	86	523.7983492182226	1045.582145503245	2	523.7994384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEKKIEVVM_	ENSG00000075539|ENST00000358350|FRYL;ENST00000302806.5_1_4:48621203-48655803:-|nuORF;FRYL|p.K2264Qfs*11|1|0.13|ENSG00000075539|chr4:48531269-48531270|-/G|frameshift_variant;FRYL|p.L330*|1|0.33|ENSG00000075539|chr4:48602066-48602066|A/-|frameshift_variant;FRYL|p.L330Ffs*3|1|0.35|ENSG00000075539|chr4:48602065-48602066|-/A|frameshift_variant;FRYL|p.P2464Efs*13|1|0.04|ENSG00000075539|chr4:48523032-48523033|-/TATACAATTC|frameshift_variant	106.68306549817024	0.032382560583716295	6				NaN	NaN	0	NaN	6333	3113	9447
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9449	26.668	NaN	26569	30	0	5038.1	0.106			+	-1	WGVPAPVMAM	10	84	372.84526060822583	1115.5139524248775	3	372.845458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))WGVPAPVMAM(Oxidation (M))_	REV__ENST00000489998.5_1_1:157772181-157772220:-|nuORF	24.519189625965996	0.6795976720565101	6				NaN	NaN	0	NaN	6334	3113	9447
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9450	26.67	NaN	26056	30	0	3548.8	0.106	+			23607	LANVEGLSV	9	103	451.2520408687634	900.4895288043268	2	451.7506408691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LANVEGLSV_	ENSG00000136531|ENST00000375437|SCN2A;ENSG00000144285|ENST00000674923|SCN1A;ENST00000480032.4_1_2:166152333-166226884:+|nuORF;nc|ENSG00000136531|Q99250-2|SCN2A;nc|ENSG00000144285|P35498-2|SCN1A;nc|ENSG00000144285|P35498-3|SCN1A;SCN1A|p.G913Wfs*2|1|0.25|ENSG00000144285|chr2:166037985-166037986|-/A|frameshift_variant;SCN1A|p.N1126Kfs*8|1|0.17|ENSG00000144285|chr2:166036099-166036100|-/T|frameshift_variant	68.78682469695295	0.14603441672067394	6				NaN	NaN	0	NaN	6335	3113	9447
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9451	26.672	NaN	16872	30	0	2868.5	0.106	+			6440	AVYADSGNFK	10	83	536.2581613647335	1070.501769796267	2	536.2591552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVYADSGNFK_	ENSG00000145780|ENST00000274457|FEM1C	76.16968421966216	0.22691431239609447	6				NaN	NaN	0	NaN	6336	3113	9447
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9452	26.673	NaN	10519	30	0	2113.8	0.106	+			16675	HILRPGTAL	9	70	489.2976429722426	976.5807330112852	2	489.2980041503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HILRPGTAL_	ENSG00000261150|ENST00000615648|EPPK1;EPPK1|p.G2015Vfs*36|2|0.33|ENSG00000261150|chr8:143867210-143867210|C/-|frameshift_variant	63.53385203322761	0.18415635464017938	6				NaN	NaN	0	NaN	6337	3113	9447
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9453	26.675	NaN	7832.4	30	0	2523.4	0.035	+			31325	QIQDSIVTK	9	81	516.2886087771965	1030.5626646211929	2	516.2900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QIQDSIVTK_	ENSG00000180855|ENST00000301547|ZNF443;ENSG00000196466|ENST00000430385|ZNF799;nc|ENSG00000196466|Q96GE5-2|ZNF799;ZNF443|p.W208Gfs*34|1|0.3|ENSG00000180855|chr19:12431550-12431550|A/-|frameshift_variant	51.19269402634007	0.2889735674168909	6				NaN	NaN	0	NaN	6338	3113	9447
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9454	26.676	NaN	8318	30	0	1334.4	0.139	+			45859	VALPSPPSPS	10	84	476.262678616143	NaN	0	476.2621765136719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VALPSPPSPS_	ENSG00000108018|ENST00000263054|SORCS1	42.396135135203025	0.3536752194735987	6				NaN	NaN	0	NaN	6339	3113	9447
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9472	26.715	NaN	18961	30	0	4217.9	0.214	+			41995	SVYGYGVQK	9	90	500.75804846479974	999.5015439963995	2	500.7582702636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVYGYGVQK_	ENSG00000107164|ENST00000319725|FUBP3;FUBP3|p.P395Lfs*27|2|0.27|ENSG00000107164|chr9:130630689-130630689|C/-|frameshift_variant	74.25504064058377	0.12238981753128622	6				NaN	NaN	0	NaN	6354	3116	9471
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9473	26.719	NaN	15679	30	0	4017.9	0.106	+			5036	ATSEIFASK	9	72	477.2503334403619	952.4861139475238	2	477.2502746582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATSEIFASK_	ENSG00000005810|ENST00000544440|MYCBP2;MYCBP2|p.C1064Ifs*31|1|0.09|ENSG00000005810|chr13:77211267-77211279|TTATCAGAAGGCA/-|frameshift_variant;MYCBP2|p.N1867Tfs*9|1|0.15|ENSG00000005810|chr13:77171572-77171572|T/-|frameshift_variant;MYCBP2|p.N3049*|1|0.11|ENSG00000005810|chr13:77097894-77097895|TT/-|frameshift_variant;MYCBP2|p.P4047Qfs*26|2|0.35|ENSG00000005810|chr13:77067782-77067782|G/-|frameshift_variant;MYCBP2|p.T1507Ffs*24|1|0.04|ENSG00000005810|chr13:77185189-77185190|-/TTGTAAA|frameshift_variant;MYCBP2|p.T4311Pfs*37|1|0.14|ENSG00000005810|chr13:77059619-77059619|G/-|frameshift_variant;MYCBP2|p.V3749*|1|0.12|ENSG00000005810|chr13:77081486-77081486|C/-|frameshift_variant;nc|ENSG00000005810|O75592-2|MYCBP2	101.45984612302182	0.0377122763612125	6				NaN	NaN	0	NaN	6355	3116	9471
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9474	26.721	NaN	23002	30	0	3007.5	0.106	+			8117	DYMKTTSNF	9	89	561.7413706165275	1121.468188299855	2	561.7424926757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_DYM(Oxidation (M))KTTSNF_	ENSG00000165525|ENST00000298310|NEMF;nc|ENSG00000165525|O60524-3|NEMF;nc|ENSG00000165525|O60524-4|NEMF;NEMF|p.K641Rfs*9|1|0.15|ENSG00000165525|chr14:49802721-49802721|T/-|frameshift_variant;NEMF|p.M879*|1|0.12|ENSG00000165525|chr14:49789558-49789558|T/-|frameshift_variant;NEMF|p.M879Nfs*10|1|0.13|ENSG00000165525|chr14:49789557-49789558|-/T|frameshift_variant	159.27591364854348	0.004707062175358555	6				NaN	NaN	0	NaN	6356	3116	9471
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9475	26.723	NaN	19978	30	0	1512.3	0.106	+			42376	TAINASRAL	9	83	458.76348185737766	915.5124107815553	2	458.7637939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TAINASRAL_	ENSG00000174373|ENST00000680220|RALGAPA1;ENST00000443361.1_1_9:108287470-108288637:+|nuORF;nc|ENSG00000174373|Q6GYQ0-2|RALGAPA1;nc|ENSG00000174373|Q6GYQ0-5|RALGAPA1;nc|ENSG00000174373|Q6GYQ0-6|RALGAPA1;nc|ENSG00000174373|Q6GYQ0-7|RALGAPA1;nc|ENSG00000174373|Q6GYQ0|RALGAPA1	86.88156770896713	0.07365720931774442	6				NaN	NaN	0	NaN	6357	3116	9471
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9476	26.724	NaN	38983	30	0	7814.2	0.106				-1	RHMSALLKR	9	95	376.5536006912833	1126.63897267405	3	376.8888854980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_RHM(Oxidation (M))SALLKR_	ENST00000438568.6_1_1:150479567-150479729:+|nuORF	37.81151784470057	0.4459294069877048	6				NaN	NaN	0	NaN	6358	3116	9471
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9477	26.726	NaN	10417	30	0	1233	0.035	+			13954	GSAFSTSISK	10	73	492.7526633922324	983.4907738512649	2	492.7527770996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GSAFSTSISK_	ENSG00000179115|ENST00000314606|FARSA;ENST00000592662.5_1_19:13039347-13044510:-|nuORF	77.53327743719008	0.21577387331637743	6				NaN	NaN	0	NaN	6359	3116	9471
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9478	26.727	NaN	7747.8	30	0	1137.2	0.138	+			15472	GVAELGVTK	9	66	437.2551872730271	872.4958216128542	2	437.2554931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GVAELGVTK_	ENSG00000105058|ENST00000263384|FAM32A;ENST00000589852.5_1_19:16296199-16296328:+|nuORF;nc|ENSG00000105058|Q9Y421-2|FAM32A	72.87924865735499	0.12833875048249987	6				NaN	NaN	0	NaN	6360	3116	9471
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9496	26.766	NaN	279000	30	0	28994	0.158				-1	 	0	104	483.7657377247249	965.5169225162498	2	483.7662048339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6375	3119	9495
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9497	26.769	NaN	91668	30	0	31418	0.106	+			14533	GTDRTGFTFK	10	109	377.19264325272536	1128.5561003583762	3	377.1927490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTDRTGFTFK_	ENSG00000100297|ENST00000216122|MCM5	42.33807565288922	0.5276008846745733	6				NaN	NaN	0	NaN	6376	3119	9495
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9498	26.771	NaN	28761	30	0	4793.2	0.106			+	32326	QTSYNNKFK	9	78	565.2854909700126	1128.556429006825	2	565.2859497070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QTSYNNKFK_	REV__ENSG00000047849|ENST00000683076|MAP4;REV__MAP4|p.R919Gfs*14|1|0.44|ENSG00000047849|chr3:47870917-47870917|G/-|frameshift_variant;REV__MAP4|p.T960Qfs*35|1|0.3|ENSG00000047849|chr3:47869309-47869309|T/-|frameshift_variant;REV__MAP4|p.V999*|1|0.25|ENSG00000047849|chr3:47867318-47867318|T/-|frameshift_variant	68.78682469695295	0.14603441672067394	6				NaN	NaN	0	NaN	6377	3119	9495
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9499	26.773	NaN	40994	30	0	4274.3	0.106	+			35952	SEGPKVVSV	9	104	451.2520408687634	900.4895288043268	2	451.25286865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SEGPKVVSV_	ENSG00000143373|ENST00000336715|ZNF687;nc|ENSG00000143373|Q8N1G0-2|ZNF687;ZNF687|p.A639Pfs*74|1|0.27|ENSG00000143373|chr1:151288202-151288202|G/-|frameshift_variant;ZNF687|p.H733Mfs*30|1|0.58|ENSG00000143373|chr1:151288603-151288603|C/-|frameshift_variant;ZNF687|p.P960Lfs*23|1|0.3|ENSG00000143373|chr1:151289915-151289915|G/-|frameshift_variant;ZNF687|p.R871Gfs*29|1|0.1|ENSG00000143373|chr1:151289512-151289512|A/-|frameshift_variant;ZNF687|p.R939Vfs*10|1|0.08|ENSG00000143373|chr1:151289852-151289852|C/-|frameshift_variant	82.7504851949679	0.08565546331141553	6				NaN	NaN	0	NaN	6378	3119	9495
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9500	26.775	NaN	30552	30	0	6995.4	0.106				-1	 	0	73	386.24572179429344	1155.7153359830804	3	386.2460021972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6379	3119	9495
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9501	26.776	NaN	37953	30	0	5535.8	0.106				-1	 	0	86	470.24331045255616	469.23603398595617	1	471.2559509277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6380	3119	9495
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9502	26.778	NaN	15177	30	0	2614.1	0.036	+			38177	SQCEFSMGK	9	84	537.2222065666755	1072.4298602001509	2	537.2234497070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_SQC(Carbamidomethyl (C))EFSMGK_	ENSG00000163634|ENST00000295899|THOC7;ENST00000487570.1_1_3:63824036-63825384:-|nuORF;THOC7|p.M198Ifs*5|1|0.05|ENSG00000163634|chr3:63834152-63834153|CC/-|frameshift_variant;THOC7|p.N115Kfs*6|1|0.12|ENSG00000163634|chr3:63837983-63837984|-/T|frameshift_variant;THOC7|p.Q105Afs*16|1|0.29|ENSG00000163634|chr3:63838016-63838017|-/T|frameshift_variant	125.71293069911285	0.017741295328254008	6				NaN	NaN	0	NaN	6381	3119	9495
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9520	26.815	NaN	293890	30	0	101050	0.16				-1	 	0	89	470.24331045255616	469.23603398595617	1	470.2424011230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6396	3122	9519
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9521	26.818	NaN	84246	30	0	13854	0.106				-1	 	0	101	560.7648700107582	1119.5151870883162	2	560.7660522460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6397	3122	9519
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9522	26.82	NaN	49103	30	0	18401	0.106	+			34812	RYLEKPMEI	9	86	597.8118193566869	1193.6090857801737	2	597.8131713867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_RYLEKPM(Oxidation (M))EI_	ENSG00000168610|ENST00000264657|STAT3;nc|ENSG00000168610|P40763-2|STAT3;nc|ENSG00000168610|P40763-3|STAT3;STAT3|p.R729Afs*3|2|0.33|ENSG00000168610|chr17:42316861-42316861|G/-|frameshift_variant	96.0336014099291	0.047854655524928534	6				NaN	NaN	0	NaN	6398	3122	9519
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9523	26.822	NaN	27429	30	0	8075.7	0.106	+			5747	AVGDTPIMK	9	86	466.24906322737866	930.4835735215573	2	466.2491760253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVGDTPIMK_	ENSG00000145782|ENST00000509910|ATG12;ENST00000508464.5_1_5:115169283-115173453:-|nuORF;ENST00000578331.1_1_17:71064194-71064335:-|nuORF	65.46538089061403	0.16805504838372562	6				NaN	NaN	0	NaN	6399	3122	9519
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9524	26.823	NaN	23591	30	0	4797.1	0.106	+			37626	SLQEVLPDIT	10	75	372.20463134783574	1113.5920646437073	3	372.2049255371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SLQEVLPDIT_	ENSG00000253953|ENST00000519479|PCDHGB4;ENSG00000276547|ENST00000617380|PCDHGB5;nc|ENSG00000253953|Q9UN71-2|PCDHGB4;nc|ENSG00000276547|Q9Y5G0-2|PCDHGB5	21.9598887501803	0.7004979571547932	6				NaN	NaN	0	NaN	6400	3122	9519
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9525	26.825	NaN	24782	30	0	5267.9	0.106	+			17421	IASSRSVDL	9	94	474.2608525840523	946.5071522349047	2	474.2607116699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IASSRSVDL_	ENSG00000135052|ENST00000388712|GOLM1;GOLM1|p.K180Nfs*4|1|0.16|ENSG00000135052|chr9:86040796-86040797|-/A|frameshift_variant;GOLM1|p.N182Efs*2|1|0.23|ENSG00000135052|chr9:86040796-86040797|-/T|frameshift_variant;nc|ENSG00000135052|Q8NBJ4-2|GOLM1	78.26377905018397	0.10505600812668463	6				NaN	NaN	0	NaN	6401	3122	9519
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9526	26.827	NaN	33372	30	0	3899	0.036			+	25670	LRDPQDIYG	9	106	538.77299050538	1075.53142807756	2	538.7742309570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LRDPQDIYG_	REV__ENST00000585033.1_1_18:641361-657928:-|nuORF	53.351449002276354	0.2690372970092375	6				NaN	NaN	0	NaN	6402	3122	9519
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9545	26.862	NaN	109140	30	0	30956	0.201				-1	WLDVCRLPA	9	108	377.1992744152451	1128.5759938459353	3	377.1996765136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_WLDVC(Carbamidomethyl (C))RLPA_	ENSG00000283297|ENST00000637658|TEX52	32.81241826257853	0.4965981579233955	6				NaN	NaN	0	NaN	6418	3125	9544
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9546	26.865	NaN	63697	30	0	14546	0.106	+			32217	QTANPGTQLSI	11	104	565.2953348153258	1128.5761166974514	2	565.2962646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QTANPGTQLSI_	ENST00000405204.6_1_6:107349642-107349852:+|nuORF	112.10723106719422	0.035657131695213805	6				NaN	NaN	0	NaN	6419	3125	9544
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9547	26.868	NaN	38620	30	0	5833.4	0.106			+	17129	HSQLKEHPV	9	98	537.7873701888024	1073.5601874444046	2	537.7885131835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HSQLKEHPV_	REV__ENSG00000198723|ENST00000361664|TEX45	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	6420	3125	9544
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9548	26.869	NaN	24024	30	0	4534.9	0.106			+	-1	IRVFNKDML	9	83	384.5458593551018	1150.6157486655054	3	384.5462646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_IRVFNKDM(Oxidation (M))L_	REV__ENSG00000123066|ENST00000281928|MED13L;REV__MED13L|p.S1087Lfs*27|1|0.31|ENSG00000123066|chr12:115991696-115991696|G/-|frameshift_variant	37.81151784470057	0.4459294069877048	6				NaN	NaN	0	NaN	6421	3125	9544
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9549	26.871	NaN	10509	30	0	2001.9	0.106	+			40103	STNWSDVGK	9	87	497.23482272072613	992.4550925082523	2	497.2354431152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STNWSDVGK_	ENSG00000165416|ENST00000310528|SUGT1;ENST00000609175.1_1_13:53261778-53261967:+|nuORF;nc|ENSG00000165416|Q9Y2Z0|SUGT1	79.48907831485694	0.09975780661107167	6				NaN	NaN	0	NaN	6422	3125	9544
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9550	26.873	NaN	7216.9	30	0	1030.1	0.106	+			34598	RVMQDIVYK	9	71	576.3151103943487	1150.6156678554973	2	576.3161010742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RVMQDIVYK_	ENSG00000115289|ENST00000233630|PCGF1;ENST00000475863.5_1_2:74732272-74734286:-|nuORF;ENST00000480844.2_1_2:74732736-74734502:-|nuORF;ENST00000496911.1_1_2:74733844-74734286:-|nuORF;nc|ENSG00000115289|Q9BSM1-3|PCGF1	65.46538089061403	0.16805504838372562	6				NaN	NaN	0	NaN	6423	3125	9544
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9551	26.875	NaN	9004.9	30	0	3059.6	0.034			+	12566	GEGPGAGCVY	10	66	455.1930072162721	908.3714614993443	2	455.1937255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GEGPGAGCVY_	REV__ENSG00000129473|ENST00000250405|BCL2L2;REV__ENSG00000258643|ENST00000678502|BCL2L2-PABPN1;REV__nc|ENSG00000258643|Q92843-2|BCL2L2	37.15910966729921	0.575322462179216	6				NaN	NaN	0	NaN	6424	3125	9544
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9569	26.912	NaN	30814	30	0	13266	0.214				-1	 	0	76	431.2551004461251	860.4956479590502	2	431.25543212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6439	3128	9568
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9570	26.916	NaN	48650	30	0	22659	0.106				-1	GTLMWHQMK	9	80	383.1839412746996	1146.5299944242988	3	383.184326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_GTLM(Oxidation (M))WHQMK_	ENST00000346169.6_1_3:184032401-184033585:+|nuORF;ENST00000352767.7_2_3:184032446-184033585:+|nuORF	31.529811441608018	0.5085848003137583	6				NaN	NaN	0	NaN	6440	3128	9568
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9571	26.918	NaN	22370	30	0	7241.1	0.106	+			29093	NTMNQFVNK	9	79	548.265456066556	1094.516359199912	2	548.2664184570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NTMNQFVNK_	ENSG00000168090|ENST00000303904|COPS6	190.2614974402762	0.00026591377982909756	6				NaN	NaN	0	NaN	6441	3128	9568
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9572	26.92	NaN	11768	30	0	6860.5	0.106				-1	 	0	50	322.1931304220312	642.3717079108624	2	322.1935729980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6442	3128	9568
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9573	26.922	NaN	8656.2	30	0	1819.5	0.106	+			23026	KVSSDLPQI	9	73	493.7787509928915	985.542949052583	2	493.7792663574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KVSSDLPQI_	ENSG00000205978|ENST00000382554|NYNRIN;NYNRIN|p.A1060Qfs*55|1|0.28|ENSG00000205978|chr14:24414924-24414924|G/-|frameshift_variant;NYNRIN|p.A1288Rfs*152|1|0.45|ENSG00000205978|chr14:24415606-24415606|C/-|frameshift_variant;NYNRIN|p.G1206Vfs*50|1|0.1|ENSG00000205978|chr14:24415362-24415362|G/-|frameshift_variant;NYNRIN|p.L483*|1|0.05|ENSG00000205978|chr14:24409238-24409238|C/-|frameshift_variant;NYNRIN|p.Q626Rfs*7|1|0.37|ENSG00000205978|chr14:24409667-24409667|C/-|frameshift_variant	59.93077597824379	0.21419174904018318	6				NaN	NaN	0	NaN	6443	3128	9568
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9574	26.923	NaN	8345.1	30	0	1095	0.035			+	12302	GDADEQLDE	9	75	496.195898189106	990.377243445012	2	496.1965026855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GDADEQLDE_	REV__ENSG00000154845|ENST00000400556|PPP4R1;REV__ENST00000577779.1_1_18:9594966-9614482:-|nuORF;REV__ENST00000580283.1_1_18:9594966-9614260:-|nuORF;REV__nc|ENSG00000154845|Q8TF05-2|PPP4R1;REV__PPP4R1|p.K793Sfs*34|1|0.1|ENSG00000154845|chr18:9550311-9550312|TT/-|frameshift_variant;REV__PPP4R1|p.L448Rfs*6|1|0.28|ENSG00000154845|chr18:9570387-9570388|AA/-|frameshift_variant	76.7741389293348	0.11149722112137898	6				NaN	NaN	0	NaN	6444	3128	9568
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9575	26.924	NaN	13499	30	0	3363.1	0.144				-1	 	0	73	413.91461222807567	1238.722007284427	3	413.9149169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6445	3128	9568
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9593	26.963	NaN	203580	30	0	108770	0.166	+			32358	QTYVGITEK	9	79	519.7765785657413	1037.5386041982824	2	519.77734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QTYVGITEK_	ENSG00000144028|ENST00000323853|SNRNP200	145.46060221211434	0.007927189773590037	6				NaN	NaN	0	NaN	6460	3131	9592
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9594	26.965	NaN	53455	30	0	8606.6	0.106			+	2368	ANDIQLVANA	10	85	514.7716239408868	1027.5286949485735	2	514.7724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ANDIQLVANA_	REV__CON__Q7Z3Z0;REV__ENSG00000204897|ENST00000312150|KRT25	72.87924865735499	0.25379688738724415	6				NaN	NaN	0	NaN	6461	3131	9592
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9595	26.967	NaN	9394	30	0	826.56	0.106			+	24484	LGGSSLTSLP	10	70	466.2578410628112	930.5011291924225	2	466.2579650878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LGGSSLTSLP_	REV__TMEM129|p.P123Hfs*42|1|0.1|ENSG00000168936|chr4:1718464-1718464|G/-|frameshift_variant	99.37495909608758	0.07955302164878343	6				NaN	NaN	0	NaN	6462	3131	9592
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9596	26.969	NaN	7312.8	30	0	1204.3	0.106	+			5630	AVCYQAITK	9	70	527.2732587080502	1052.5319644829003	2	527.2737426757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_AVC(Carbamidomethyl (C))YQAITK_	ENSG00000140632|ENST00000321919|GLYR1;nc|ENSG00000140632|Q49A26-3|GLYR1;nc|ENSG00000140632|Q49A26-4|GLYR1;nc|ENSG00000140632|Q49A26-5|GLYR1	65.46538089061403	0.16805504838372562	6				NaN	NaN	0	NaN	6463	3131	9592
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9597	26.971	NaN	12191	30	0	1489.4	0.106	+			49290	VVQGDPREL	9	71	506.77388685541376	1011.5332207776275	2	506.7745666503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVQGDPREL_	ENSG00000137642|ENST00000260197|SORL1;ENST00000532451.1_1_11:121323091-121416136:+|nuORF;SORL1|p.F2103Lfs*44|1|0.22|ENSG00000137642|chr11:121625218-121625218|T/-|frameshift_variant;SORL1|p.M1581Cfs*34|2|0.28|ENSG00000137642|chr11:121605196-121605196|A/-|frameshift_variant	47.95952297671804	0.32689736945648856	6				NaN	NaN	0	NaN	6464	3131	9592
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9598	26.973	NaN	7569.6	30	0	1476.6	0.106	+			13974	GSASRVFTHI	10	81	537.7873701888024	1073.5601874444046	2	537.7872314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GSASRVFTHI_	ENST00000346085.9_2_6:157098516-157098651:+|nuORF	62.107414245175825	0.3466735403679669	6				NaN	NaN	0	NaN	6465	3131	9592
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9599	26.975	NaN	6509.4	30	0	618.25	0.034	+			35879	SEEGGHVVL	9	74	463.73154074819456	925.4485285631891	2	463.7322082519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SEEGGHVVL_	ENSG00000053747|ENST00000313654|LAMA3;nc|ENSG00000053747|Q16787-1|LAMA3;nc|ENSG00000053747|Q16787-3|LAMA3;nc|ENSG00000053747|Q16787-4|LAMA3	88.64286706044652	0.06869153472052109	6				NaN	NaN	0	NaN	6466	3131	9592
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9618	27.012	NaN	20301	30	0	3142.4	0.214	+			23100	KVVEGSFVYK	10	88	578.3236355729686	1154.632718212737	2	578.3248291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVVEGSFVYK_	ENSG00000203879|ENST00000447750|GDI1;ENST00000491154.1_1_X:153666748-153668487:+|nuORF	149.94371410395783	0.008505529634726706	6				NaN	NaN	0	NaN	6482	3134	9617
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9619	27.016	NaN	12231	30	0	1498.7	0.106	+			44446	TSMSKMFVK	9	83	529.7715779898872	1057.5286030465743	2	529.7730102539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TSMSKMFVK_	ATP2A2|p.I1027Cfs*4|1|0.37|ENSG00000174437|chr12:110346394-110346395|-/TGTGCTGCTCATAATGCCCCTGG|frameshift_variant;ENSG00000174437|ENST00000539276|ATP2A2;nc|ENSG00000174437|P16615-2|ATP2A2;nc|ENSG00000174437|P16615-3|ATP2A2;nc|ENSG00000174437|P16615-4|ATP2A2;nc|ENSG00000174437|P16615-5|ATP2A2	117.81106730687013	0.02252488733980868	6				NaN	NaN	0	NaN	6483	3134	9617
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9620	27.018	NaN	15046	30	0	1799.3	0.106	+			9246	EGVEYIARA	9	89	504.26054739939	1006.5065418655801	2	504.7538757324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EGVEYIARA_	ENSG00000074603|ENST00000300141|DPP8;nc|ENSG00000074603|Q6V1X1-2|DPP8;nc|ENSG00000074603|Q6V1X1-4|DPP8;nc|ENSG00000074603|Q6V1X1-5|DPP8;nc|ENSG00000074603|Q6V1X1|DPP8	61.691277971877994	0.19951612995419254	6				NaN	NaN	0	NaN	6484	3134	9617
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9621	27.02	NaN	11712	30	0	2354.5	0.106	+			43667	TIYNAAIQK	9	75	511.2871684690981	1020.5597840049962	2	511.2879638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TIYNAAIQK_	ENSG00000164169|ENST00000322396|PRMT9;nc|ENSG00000164169|Q6P2P2-2|PRMT9	80.45461616416974	0.09558281504443908	6				NaN	NaN	0	NaN	6485	3134	9617
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9622	27.021	NaN	10312	30	0	2176.2	0.106	+			3917	ATASAIEAMK	10	82	496.75626597691206	991.4979790206241	2	496.7579345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATASAIEAMK_	ENSG00000100106|ENST00000644935|TRIOBP;nc|ENSG00000100106|Q9H2D6-2|TRIOBP;nc|ENSG00000100106|Q9H2D6-3|TRIOBP;nc|ENSG00000100106|Q9H2D6-5|TRIOBP;nc|ENSG00000100106|Q9H2D6-7|TRIOBP	145.46060221211434	0.009301538339246195	6				NaN	NaN	0	NaN	6486	3134	9617
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9623	27.023	NaN	11104	30	0	1202.7	0.036	+			27707	MPYSHPSSY	9	79	534.7259810024184	1067.4374090716367	2	534.7271728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MPYSHPSSY_	ENSG00000164190|ENST00000282516|NIPBL;ENST00000504430.5_1_5:36961623-36995905:+|nuORF;nc|ENSG00000164190|Q6KC79-2|NIPBL;nc|ENSG00000164190|Q6KC79-3|NIPBL;NIPBL|p.F1423Lfs*15|1|0.43|ENSG00000164190|chr5:37008032-37008032|T/-|frameshift_variant;NIPBL|p.I2776Lfs*3|1|0.17|ENSG00000164190|chr5:37064797-37064797|A/-|frameshift_variant;NIPBL|p.K603Sfs*11|2|0.29|ENSG00000164190|chr5:36984981-36984981|A/-|frameshift_variant;NIPBL|p.L2220Ffs*3|1|0.21|ENSG00000164190|chr5:37048567-37048568|-/T|frameshift_variant;NIPBL|p.R505Efs*35|1|0.19|ENSG00000164190|chr5:36984687-36984687|A/-|frameshift_variant	143.01937276914788	0.00906355689373299	6				NaN	NaN	0	NaN	6487	3134	9617
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9624	27.024	NaN	9409.7	30	0	1771	0.144			+	17320	IAGAMRTLQI	10	79	358.5434513534292	NaN	0	358.54473876953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IAGAMRTLQI_	REV__ENSG00000115129|ENST00000238721|TP53I3;REV__nc|ENSG00000115129|Q53FA7-2|TP53I3;REV__TP53I3|p.E195Rfs*5|1|0.44|ENSG00000115129|chr2:24080855-24080856|-/T|frameshift_variant	76.16968421966216	0.118310876128328	6				NaN	NaN	0	NaN	6488	3134	9617
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9642	27.064	NaN	30843	30	0	4514.2	0.214	+			41913	SVVGNFQEK	9	88	504.26054739939	1006.5065418655801	2	504.26123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVVGNFQEK_	ENSG00000180061|ENST00000326652|TMEM150B	55.721020083383095	0.24928445224720705	6				NaN	NaN	0	NaN	6503	3137	9641
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9643	27.067	NaN	25297	30	0	5992	0.106	+			17924	IGKIVGSGTP	10	72	464.7763743036205	NaN	0	464.7763977050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IGKIVGSGTP_	ENST00000479298.5_1_X:100878865-100879887:+|nuORF	54.776311868738084	0.27540594196716844	6				NaN	NaN	0	NaN	6504	3137	9641
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9644	27.069	NaN	11082	30	0	2695.6	0.106	+			45086	TVIDSQTHY	9	68	532.255678954335	1062.49680497547	2	532.2566528320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVIDSQTHY_	ENSG00000166557|ENST00000299705|TMED3	96.0336014099291	0.047854655524928534	6				NaN	NaN	0	NaN	6505	3137	9641
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9645	27.071	NaN	48614	30	0	10851	0.106	+			45337	TVSKFMAIQK	10	113	384.8860620130432	NaN	0	384.8860778808594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TVSKFMAIQK_	ENSG00000151576|ENST00000281273|QTRT2;ENST00000467703.1_1_3:113789475-113795805:+|nuORF;nc|ENSG00000151576|Q9H974-2|QTRT2;nc|ENSG00000151576|Q9H974-3|QTRT2;nc|ENSG00000151576|Q9H974-4|QTRT2	48.601550744091256	0.31444367966696773	6				NaN	NaN	0	NaN	6506	3137	9641
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9646	27.073	NaN	15817	30	0	5322.7	0.106	+			28543	NIPQREVV	8	89	477.7711624555413	953.5277719778826	2	477.7713623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NIPQREVV_	ENSG00000135100|ENST00000257555|HNF1A;ENSG00000275410|ENST00000617811|HNF1B;HNF1A|p.H500Tfs*31|1|0.15|ENSG00000135100|chr12:120997658-120997658|C/-|frameshift_variant;HNF1A|p.P291Qfs*51|4|0.47|ENSG00000135100|chr12:120994312-120994312|G/-|frameshift_variant;HNF1A|p.P379Lfs*5|3|0.42|ENSG00000135100|chr12:120996564-120996564|C/-|frameshift_variant;nc|ENSG00000135100|P20823-2|HNF1A;nc|ENSG00000135100|P20823-3|HNF1A;nc|ENSG00000135100|P20823-4|HNF1A;nc|ENSG00000135100|P20823-5|HNF1A;nc|ENSG00000135100|P20823-6|HNF1A;nc|ENSG00000135100|P20823-7|HNF1A;nc|ENSG00000135100|P20823|HNF1A;nc|ENSG00000275410|P35680-2|HNF1B;nc|ENSG00000275410|P35680-3|HNF1B;nc|ENSG00000275410|P35680-4|HNF1B	51.33545320467046	0.5859736979383976	6				NaN	NaN	0	NaN	6507	3137	9641
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9647	27.075	NaN	9788.2	30	0	964.35	0.034			+	47918	VSLSAVDKQ	9	72	473.7635100624237	NaN	0	473.7634582519531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VSLSAVDKQ_	REV__TPR|p.A450D|1|0.28|ENSG00000047410|chr1:186359839-186359839|G/T|missense_variant	56.43379154798735	0.16452882468284893	6				NaN	NaN	0	NaN	6508	3137	9641
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9648	27.075	NaN	10135	30	0	3868.5	0.144				-1	LIDSSYLTRM	10	66	405.54019606093135	NaN	0	405.54022216796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_LIDSSYLTRM(Oxidation (M))_	GREB1L|p.T1067M|1|0.35|ENSG00000141449|chr18:21496507-21496507|C/T|missense_variant	26.063383197487333	0.4145965855542893	6				NaN	NaN	0	NaN	6509	3137	9641
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9667	27.113	NaN	134080	30	0	20965	0.214	+			14318	GSYNKVFLAK	10	103	376.21334275940336	1125.61819887841	3	376.2132873535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSYNKVFLAK_	ENSG00000099341|ENST00000215071|PSMD8;ENST00000592001.5_1_19:38865430-38871817:+|nuORF	145.46060221211434	0.009301538339246195	6				NaN	NaN	0	NaN	6525	3140	9666
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9668	27.117	NaN	63927	30	0	12831	0.106				-1	 	0	102	563.8156798870311	1125.6168068408622	2	563.8165283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6526	3140	9666
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9669	27.119	NaN	21171	30	0	9548.8	0.106	+			8776	EEIAKVEKL	9	83	529.8080885529779	1057.6016241727557	2	529.8084716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EEIAKVEKL_	ENSG00000170348|ENST00000303575|TMED10;ENST00000555036.1_1_14:75602424-75614456:-|nuORF;ENST00000556969.5_1_14:75601590-75614465:-|nuORF	120.30596017624542	0.02101454110788768	6				NaN	NaN	0	NaN	6527	3140	9666
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9670	27.121	NaN	88898	30	0	44801	0.106			+	31690	QNLDITFLR	9	98	373.87652407616974	1118.6077428287092	3	373.8766174316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QNLDITFLR_	REV__ENSG00000122025|ENST00000241453|FLT3;REV__nc|ENSG00000122025|P36888-2|FLT3	54.776311868738084	0.25715957988447635	6				NaN	NaN	0	NaN	6528	3140	9666
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9671	27.122	NaN	10565	30	0	3208.7	0.106				-1	 	0	78	593.8294033309901	1185.64425372878	2	593.8305053710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6529	3140	9666
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9672	27.124	NaN	30043	30	0	10451	0.038			+	-1	SLHMCLPPSP	10	90	385.51534783280005	1153.5242140986002	3	385.51580810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),Oxidation (M)	_SLHM(Oxidation (M))C(Carbamidomethyl (C))LPPSP_	REV__ENST00000573130.2_1_16:3104061-3104997:-|nuORF;REV__ENST00000573130.2_1_16:3104061-3104997:-|nuORF;REV__ENST00000573130.2_1_16:3104061-3104997:-|nuORF	41.42661286455405	0.5359995577334734	6				NaN	NaN	0	NaN	6530	3140	9666
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9673	27.125	NaN	12568	30	0	5511.3	0.143			+	-1	TLCLVMFLHL	10	65	402.551919442373	1204.633928927319	3	402.5521545410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_TLCLVM(Oxidation (M))FLHL_	REV__ENSG00000178904|ENST00000392250|DPY19L3;REV__nc|ENSG00000178904|Q6ZPD9-2|DPY19L3	37.81151784470057	0.569310847604193	6				NaN	NaN	0	NaN	6531	3140	9666
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9691	27.164	NaN	79850	30	0	11182	0.188	+			3442	ASQLVGIEK	9	95	472.7736019985778	943.5326510639557	2	472.7738342285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASQLVGIEK_	ENSG00000077152|ENST00000646651|UBE2T	147.73206827945663	0.0073977474511673896	6				NaN	NaN	0	NaN	6546	3143	9690
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9692	27.168	NaN	26056	30	0	3162.1	0.106			+	-1	LECASCPRK	9	78	560.7648700107582	1119.5151870883162	2	560.7659912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_LEC(Carbamidomethyl (C))ASC(Carbamidomethyl (C))PRK_	REV__ENST00000519149.1_1_5:169714972-169724783:-|nuORF;REV__ENST00000519594.5_1_5:169697651-169724717:-|nuORF;REV__ENST00000522760.5_1_5:169700986-169724717:-|nuORF;REV__ENST00000522823.5_1_5:169702797-169724783:-|nuORF	37.81151784470057	0.4459294069877048	6				NaN	NaN	0	NaN	6547	3143	9690
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9693	27.17	NaN	15731	30	0	5504.5	0.106	+			14157	GSMTVVTVK	9	76	461.2563175292235	920.498082125247	2	461.25701904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GSMTVVTVK_	ENSG00000001461|ENST00000374399|NIPAL3;nc|ENSG00000001461|Q6P499-2|NIPAL3	106.68306549817024	0.032382560583716295	6				NaN	NaN	0	NaN	6548	3143	9690
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9694	27.171	NaN	19703	30	0	9455	0.106	+			48615	VTSDHLKGLH	10	66	369.5369446523948	1105.5890045573844	3	369.53662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTSDHLKGLH_	ENSG00000100241|ENST00000380817|SBF1;ENST00000444527.2_1_8:56365111-56365366:-|nuORF;nc|ENSG00000100241|O95248-4|SBF1;nc|ENSG00000100241|O95248|SBF1;SBF1|p.L946Wfs*16|1|0.26|ENSG00000100241|chr22:50461526-50461526|G/-|frameshift_variant;SBF1|p.S1077Afs*28|3|0.34|ENSG00000100241|chr22:50460327-50460327|G/-|frameshift_variant;SBF1|p.S1077Qfs*11|2|0.34|ENSG00000100241|chr22:50460326-50460327|-/G|frameshift_variant	30.503639358989545	0.6307262373768582	6				NaN	NaN	0	NaN	6549	3143	9690
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9695	27.173	NaN	23235	30	0	11992	0.106	+			25409	LPLALQEKY	9	80	537.8118688156075	1073.6091846980148	2	538.31689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LPLALQEKY_	ENSG00000134962|ENST00000257408|KLB	42.396135135203025	0.392153681582562	6				NaN	NaN	0	NaN	6550	3143	9690
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9696	27.175	NaN	8252.6	30	0	971.16	0.106	+			23446	LADPENRQL	9	73	528.2768824572305	1054.539211981261	2	528.2777709960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LADPENRQL_	ENSG00000172164|ENST00000517992|SNTB1;ENST00000519177.5_1_8:121583594-121823792:-|nuORF;nc|ENSG00000172164|Q13884-2|SNTB1	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	6551	3143	9690
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9697	27.177	NaN	8519.6	30	0	2031.2	0.034				-1	DRAQEMAT	8	77	469.20558215070577	936.3966113682116	2	469.205810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_DRAQEM(Oxidation (M))AT_	ENSG00000282419|ENST00000632372|TEX13D	82.30502934623384	0.30436709589983096	6				NaN	NaN	0	NaN	6552	3143	9690
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9715	27.214	NaN	16562	30	0	4170.8	0.214			+	22005	KSFYEKSK	8	79	508.7737043725769	1015.5328558119538	2	508.7742614746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSFYEKSK_	REV__ENSG00000117450|ENST00000319248|PRDX1	104.0567914643314	0.248440647781298	6				NaN	NaN	0	NaN	6567	3146	9714
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9716	27.218	NaN	15315	30	0	3754.3	0.106	+			18744	ITKEKLHTI	9	71	361.5567516216403	1081.648425465121	3	361.55712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ITKEKLHTI_	CEP290|p.E1553Kfs*4|1|0.52|ENSG00000198707|chr12:88084634-88084634|T/-|frameshift_variant;CEP290|p.I2385*|1|0.37|ENSG00000198707|chr12:88050410-88050410|T/-|frameshift_variant;CEP290|p.L2448Tfs*8|1|0.11|ENSG00000198707|chr12:88049282-88049283|-/T|frameshift_variant;CEP290|p.M1079Cfs*9|1|0.24|ENSG00000198707|chr12:88093844-88093844|T/-|frameshift_variant;CEP290|p.R2306Nfs*40|1|0.14|ENSG00000198707|chr12:88055616-88055619|TCTC/-|frameshift_variant;ENSG00000198707|ENST00000552810|CEP290	39.252832667884924	0.4290233611298554	6				NaN	NaN	0	NaN	6568	3146	9714
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9717	27.22	NaN	14946	30	0	7472.2	0.106	+			49472	VVYKYLTEK	9	69	381.55321430723103	1141.6378135218931	3	381.5534362792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVYKYLTEK_	ENSG00000166471|ENST00000528080|TMEM41B;ENST00000524543.5_1_11:9304973-9316821:-|nuORF;ENST00000533867.1_1_11:9304973-9309374:-|nuORF	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	6569	3146	9714
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9718	27.222	NaN	12730	30	0	1728.2	0.106	+			26010	LSKSNPVI	8	76	429.2576535988194	856.5007542644388	2	429.2580871582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSKSNPVI_	ENSG00000080802|ENST00000541284|CNOT4;nc|ENSG00000080802|O95628-2|CNOT4;nc|ENSG00000080802|O95628-3|CNOT4;nc|ENSG00000080802|O95628-4|CNOT4;nc|ENSG00000080802|O95628-5|CNOT4;nc|ENSG00000080802|O95628-6|CNOT4;nc|ENSG00000080802|O95628-7|CNOT4;nc|ENSG00000080802|O95628-8|CNOT4;nc|ENSG00000080802|O95628-9|CNOT4;nc|ENSG00000080802|O95628|CNOT4	79.71258880314673	0.32596852995588826	6				NaN	NaN	0	NaN	6570	3146	9714
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9719	27.224	NaN	12916	30	0	778.32	0.106			+	21444	KNDKIYLL	8	84	503.79802907602794	1005.5815052188559	2	503.8004455566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KNDKIYLL_	REV__tr|U7T0G8|U7T0G8_FUSNUShikimatedehydrogenase(NADP(+))OS=FusobacteriumnucleatumCTI-5OX=1316586GN=aroEPE=3SV=1	60.97194046774394	0.49215940876911696	6				NaN	NaN	0	NaN	6571	3146	9714
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9720	27.226	NaN	10809	30	0	2583.5	0.031			+	37739	SLTPGLGG	8	62	351.1960647422291	700.3775765512582	2	351.1963806152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLTPGLGG_	REV__ENST00000303961.8_1_19:41313938-41314193:+|nuORF	28.2542754592877	0.7411748056684583	6				NaN	NaN	0	NaN	6572	3146	9714
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9721	27.226	NaN	15327	30	0	2698	0.14	+			9922	EQTFAFQV	8	77	485.236063559945	968.4575741866901	2	485.23583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EQTFAFQV_	ENST00000330387.10_1_7:137686484-137686628:-|nuORF	58.22992032128504	0.519305013932957	6				NaN	NaN	0	NaN	6573	3146	9714
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9739	27.266	NaN	25620	30	0	5571.4	0.214	+			40568	SVAECQLMK	9	79	533.256078956781	1064.497604980362	2	533.2573852539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SVAEC(Carbamidomethyl (C))QLMK_	ENSG00000105221|ENST00000392038|AKT2;ENST00000391844.8_1_19:40739781-40791100:-|nuORF;ENST00000537834.5_1_19:40745726-40771198:-|nuORF;nc|ENSG00000105221|P31751-2|AKT2	145.15565482312357	0.00806134135205793	6				NaN	NaN	0	NaN	6588	3149	9738
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9740	27.269	NaN	32842	30	0	4656.7	0.106	+			21233	KLIDRTESL	9	89	537.8118688156075	1073.6091846980148	2	537.8118896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KLIDRTESL_	ENSG00000130592|ENST00000311604|LSP1;ENST00000485341.5_1_11:1902588-1908790:+|nuORF;nc|ENSG00000130592|P33241-2|LSP1;nc|ENSG00000130592|P33241-3|LSP1	117.81106730687013	0.02252488733980868	6				NaN	NaN	0	NaN	6589	3149	9738
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9741	27.271	NaN	16259	30	0	3282.6	0.106	+			6298	AVSTFAMVK	9	72	485.25684037192366	968.4991278106473	2	485.2571105957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_AVSTFAM(Oxidation (M))VK_	ENSG00000172893|ENST00000355527|DHCR7;ENST00000534701.1_1_11:71149825-71152361:-|nuORF	95.81516180277367	0.04847050768394289	6				NaN	NaN	0	NaN	6590	3149	9738
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9742	27.273	NaN	22475	30	0	8603.5	0.106			+	-1	VRPCCLGKL	9	79	368.19972072390533	1101.577332771916	3	368.19989013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_VRPC(Carbamidomethyl (C))C(Carbamidomethyl (C))LGKL_	REV__ENSG00000006788|ENST00000252172|MYH13;REV__MYH13|p.K1396Nfs*37|1|0.46|ENSG00000006788|chr17:10312751-10312751|T/-|frameshift_variant	19.1035232394073	0.6112419832031293	6				NaN	NaN	0	NaN	6591	3149	9738
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9743	27.275	NaN	20977	30	0	5574.9	0.106	+			1947	AISSTVLGK	9	78	438.2630676246204	874.5115823160409	2	438.26324462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AISSTVLGK_	ENSG00000105976|ENST00000397752|MET;nc|ENSG00000105976|P08581-2|MET	85.16082228582465	0.07850854922700509	6				NaN	NaN	0	NaN	6592	3149	9738
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9744	27.277	NaN	9424.7	30	0	1022.9	0.035			+	8895	EETNLGVDK	9	72	502.7485121565299	NaN	0	502.7483825683594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EETNLGVDK_	REV__ENST00000457356.8_1_8:72965279-72965408:+|nuORF	77.31757898189308	0.08057531075035683	6				NaN	NaN	0	NaN	6593	3149	9738
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9745	27.277	NaN	7724.3	30	0	938.32	0.138	+			2412	APAPPASQY	9	76	451.223820858416	900.433088783632	2	451.2241516113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_APAPPASQY_	ENSG00000050820|ENST00000162330|BCAR1;nc|ENSG00000050820|P56945-2|BCAR1;nc|ENSG00000050820|P56945-3|BCAR1;nc|ENSG00000050820|P56945-5|BCAR1;nc|ENSG00000050820|P56945-6|BCAR1;nc|ENSG00000050820|P56945-7|BCAR1;nc|ENSG00000050820|P56945-8|BCAR1	99.37495909608758	0.03983967222258828	6				NaN	NaN	0	NaN	6594	3149	9738
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9763	27.317	NaN	95255	30	0	35236	0.214	+			6221	AVQTAAKELLK	11	99	391.2394006044659	1170.6963724135978	3	391.23974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVQTAAKELLK_	ENSG00000123992|ENST00000273075|DNPEP;ENST00000430206.5_1_2:220251659-220252065:-|nuORF;ENST00000460963.5_1_2:220250088-220252486:-|nuORF;ENST00000523527.5_1_2:220250965-220252516:-|nuORF;nc|ENSG00000123992|Q9ULA0-2|DNPEP	65.69465075029274	0.27262252711350304	6				NaN	NaN	0	NaN	6609	3152	9762
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9764	27.32	NaN	7704.1	30	0	1283.8	0.106	+			5845	AVIIVGSAK	9	62	429.27594557174206	856.5373382102841	2	429.2765197753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVIIVGSAK_	ENSG00000138074|ENST00000310574|SLC5A6;ENST00000464538.1_1_2:27428216-27429031:-|nuORF;ENST00000488743.6_1_2:27425876-27434347:-|nuORF	79.71258880314673	0.09879134589249085	6				NaN	NaN	0	NaN	6610	3152	9762
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9765	27.322	NaN	5866.9	30	0	788.09	0.106	+			28785	NPENSELKY	9	70	547.2612053730967	1092.5078578129933	2	547.2623901367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NPENSELKY_	ENSG00000141448|ENST00000269216|GATA6;nc|ENSG00000141448|Q92908-2|GATA6	159.27591364854348	0.004707062175358555	6				NaN	NaN	0	NaN	6611	3152	9762
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9766	27.324	NaN	11751	30	0	1411.4	0.106			+	25782	LSANIQLYQ	9	84	525.2840635926412	1048.5535742520824	2	525.2855834960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSANIQLYQ_	REV__ENST00000595395.1_1_19:42061422-42061712:+|nuORF	56.43379154798735	0.2433427591689151	6				NaN	NaN	0	NaN	6612	3152	9762
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9767	27.326	NaN	31051	30	0	9498.5	0.106			+	26482	LTLPKSAQTAK	11	83	386.56799548259494	1156.682157047985	3	386.5683288574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LTLPKSAQTAK_	REV__ENSG00000198842|ENST00000361200|STYXL2	33.03940026070387	0.6432348334061824	6				NaN	NaN	0	NaN	6613	3152	9762
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9768	27.328	NaN	4770.7	30	0	850.81	0.035			+	-1	DMRWTSTL	8	67	513.2390164940323	1024.4634800548645	2	512.7393188476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_DM(Oxidation (M))RWTSTL_	REV__ENST00000506216.5_1_4:5749932-5890196:-|nuORF	38.80614096846853	0.6637206697844082	6				NaN	NaN	0	NaN	6614	3152	9762
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9769	27.328	NaN	10794	30	0	2075.5	0.14	+			28417	NETQKISQL	9	82	530.7850898594627	1059.5556267857253	2	530.7861938476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NETQKISQL_	ENSG00000140464|ENST00000268058|PML;nc|ENSG00000140464|P29590-11|PML	152.06079943815163	0.00638878961959199	6				NaN	NaN	0	NaN	6615	3152	9762
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9787	27.367	NaN	51545	30	0	21311	0.214	+			15629	GVLDRMMKK	9	80	359.86776016907925	1076.5814511074377	3	359.8683166503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVLDRMMKK_	ENSG00000163191|ENST00000271638|S100A11;ENST00000478109.1_1_1:152005140-152020324:-|nuORF	52.936696900407355	0.27249468807391813	6				NaN	NaN	0	NaN	6630	3155	9786
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9788	27.37	NaN	37314	30	0	10499	0.106				-1	 	0	83	386.88010198064524	1157.6184765421358	3	386.88031005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6631	3155	9786
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9789	27.372	NaN	14320	30	0	2484.8	0.106			+	31405	QKKTQETSK	9	75	539.2979449492675	1076.581336965335	2	539.2992553710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QKKTQETSK_	REV__ENSG00000138468|ENST00000394095|SENP7;REV__nc|ENSG00000138468|Q9BQF6-2|SENP7;REV__nc|ENSG00000138468|Q9BQF6-4|SENP7;REV__nc|ENSG00000138468|Q9BQF6-5|SENP7;REV__SENP7|p.K545Nfs*11|1|0.49|ENSG00000138468|chr3:101351640-101351640|T/-|frameshift_variant	78.26377905018397	0.10505600812668463	6				NaN	NaN	0	NaN	6632	3155	9786
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9790	27.374	NaN	8835.7	30	0	1397.1	0.106	+			23385	LAADCAHEL	9	71	500.23112447349985	998.4476960137997	2	500.2315368652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_LAADC(Carbamidomethyl (C))AHEL_	ENSG00000157379|ENST00000288111|DHRS1;ENST00000558340.1_1_14:24760067-24761569:-|nuORF;ENST00000561137.5_1_14:24760413-24761527:-|nuORF;ENST00000561273.5_1_14:24760714-24761569:-|nuORF	96.19043198914106	0.047412499214244314	6				NaN	NaN	0	NaN	6633	3155	9786
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9791	27.376	NaN	12113	30	0	1399.6	0.106	+			38435	SSALHSLLK	9	82	478.28149295173006	954.5484329702601	2	478.2817687988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSALHSLLK_	ENSG00000164944|ENST00000297591|VIRMA;ENST00000521080.5_1_8:95511544-95524374:-|nuORF;nc|ENSG00000164944|Q69YN4-3|VIRMA	120.8684288430529	0.02067403653475984	6				NaN	NaN	0	NaN	6634	3155	9786
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9792	27.378	NaN	19955	30	0	3194.6	0.035	+			1832	AIIENMSTK	9	85	503.7646098772421	1005.5146668212842	2	503.765380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AIIENMSTK_	ENSG00000116729|ENST00000262348|WLS;nc|ENSG00000116729|Q5T9L3-2|WLS;nc|ENSG00000116729|Q5T9L3-3|WLS	68.84614121027924	0.14577793175421136	6				NaN	NaN	0	NaN	6635	3155	9786
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9793	27.378	NaN	19814	30	0	5411.9	0.143	+			21752	KQPGLETNILK	11	87	620.8662501332816	1239.717947333363	2	620.8663940429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KQPGLETNILK_	ENST00000502562.5_1_4:145954424-146019337:-|nuORF	72.09557110113691	0.21826960075221502	6				NaN	NaN	0	NaN	6636	3155	9786
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9811	27.418	NaN	59366	30	0	28750	0.214	+			48698	VTTGSEGLLK	10	87	502.78331866904574	1003.5520844048915	2	502.7846984863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTTGSEGLLK_	ENSG00000134987|ENST00000513710|WDR36;ENST00000505303.5_1_5:110428043-110447004:+|nuORF;nc|ENSG00000134987|Q8NI36|WDR36	164.45504665044191	0.00544846538291036	6				NaN	NaN	0	NaN	6651	3158	9810
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9812	27.421	NaN	29297	30	0	5730.5	0.106				-1	 	0	89	370.22027285297463	1107.6389891591239	3	370.2205810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6652	3158	9810
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9813	27.424	NaN	16421	30	0	2758.6	0.106	+			24792	LIIAFFACF	9	82	522.7823331255331	1043.5501133178661	2	522.7832641601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LIIAFFACF_	tr|U7SNL5|U7SNL5_FUSNUNa+/H+antiporterNhaC-likeC-terminaldomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01803PE=4SV=1	49.21078951299608	0.3122205139198386	6				NaN	NaN	0	NaN	6653	3158	9810
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9814	27.425	NaN	17131	30	0	3688.1	0.106				-1	 	0	88	498.2971564717353	994.5797600102707	2	498.2976379394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6654	3158	9810
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9815	27.427	NaN	13994	30	0	1966.4	0.106	+			16220	HEDKIRVVL	9	88	554.8267186447438	1107.6388843562875	2	554.8276977539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HEDKIRVVL_	EHD1|p.E248Rfs*50|1|0.19|ENSG00000110047|chr11:64860098-64860098|G/-|frameshift_variant;ENSG00000024422|ENST00000263277|EHD2;ENSG00000110047|ENST00000320631|EHD1;nc|ENSG00000024422|Q9NZN4-2|EHD2	101.60071028292904	0.0375685401170269	6				NaN	NaN	0	NaN	6655	3158	9810
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9816	27.429	NaN	18872	30	0	4109.6	0.035	+			39302	STASMGGWTK	10	88	513.2390164940323	1024.4634800548645	2	513.2398681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STASMGGWTK_	ENSG00000166348|ENST00000687698|USP54;ENST00000498143.5_1_10:75279553-75335416:-|nuORF;nc|ENSG00000166348|Q70EL1-6|USP54;nc|ENSG00000166348|Q70EL1-7|USP54;USP54|p.R831Tfs*6|1|0.07|ENSG00000166348|chr10:73519973-73519983|CAGGGCAAGTC/-|frameshift_variant	131.61620852596164	0.01298938390812184	6				NaN	NaN	0	NaN	6656	3158	9810
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9817	27.43	NaN	8558.9	30	0	1324.2	0.138			+	42721	TDGDKLIK	8	83	445.2525493218619	888.4905457105239	2	445.2529602050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TDGDKLIK_	REV__ENSG00000160803|ENST00000368309|UBQLN4;REV__ENST00000472638.1_1_1:156020124-156021603:-|nuORF;REV__nc|ENSG00000160803|Q9NRR5-2|UBQLN4;REV__UBQLN4|p.A385Pfs*7|1|0.03|ENSG00000160803|chr1:156042886-156042887|GC/-|frameshift_variant	71.87747018426188	0.391254423828572	6				NaN	NaN	0	NaN	6657	3158	9810
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9835	27.469	NaN	45859	30	0	23512	0.214	+			48689	VTTGGMVLK	9	71	453.2590400004051	904.5035270676102	2	453.25958251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTTGGMVLK_	ENSG00000173369|ENST00000509305|C1QB;nc|ENSG00000173369|P02746|C1QB	98.62937762414208	0.04060045538121712	6				NaN	NaN	0	NaN	6672	3161	9834
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9836	27.473	NaN	52850	30	0	6135.7	0.106				-1	 	0	96	550.2920363536374	1098.5695197740747	2	550.2930908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6673	3161	9834
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9837	27.475	NaN	8896.3	30	0	878.12	0.106				-1	 	0	81	467.77080999758095	933.5270670619619	2	467.7711486816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6674	3161	9834
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9838	27.476	NaN	12212	30	0	1475.1	0.106			+	20441	KEVAVGTRKA	10	91	529.8188534605034	1057.6231539878067	2	529.8197021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEVAVGTRKA_	REV__ENSG00000170456|ENST00000389082|DENND5B;REV__nc|ENSG00000170456|Q6ZUT9-2|DENND5B;REV__nc|ENSG00000170456|Q6ZUT9-3|DENND5B;REV__nc|ENSG00000170456|Q6ZUT9-4|DENND5B	37.81151784470057	0.569310847604193	6				NaN	NaN	0	NaN	6675	3161	9834
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9839	27.478	NaN	14647	30	0	2819.6	0.106				-1	 	0	72	509.25265666393057	1016.4907603946612	2	509.2534484863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6676	3161	9834
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9840	27.48	NaN	16711	30	0	1406	0.035			+	-1	FANLCICF	8	90	522.7356174791339	1043.4566820250677	2	522.7395629882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Carbamidomethyl (C)	_FANLC(Carbamidomethyl (C))IC(Carbamidomethyl (C))F_	REV__ENST00000529609.5_1_11:124972094-124972662:-|nuORF	62.97842346883844	0.4722955155785405	6				NaN	NaN	0	NaN	6677	3161	9834
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9841	27.481	NaN	29750	30	0	16107	0.145			+	39461	STERPLNSTTL	11	69	406.88206615161	1217.62436905503	3	406.88262939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STERPLNSTTL_	REV__HERV35I-int_dup77|chr3:106541134-106546233:+|1.3860853119714591|0.1976016791882729|2.81|468.0|360|3|anti-sense	48.601550744091256	0.44024757269956427	6				NaN	NaN	0	NaN	6678	3161	9834
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9859	27.52	NaN	64552	30	0	8793.3	0.194	+			15675	GVMRVGLVAK	10	99	515.3147387860026	1028.6149246388052	2	515.3155517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVMRVGLVAK_	ENSG00000129351|ENST00000588657|ILF3;ENST00000587928.5_1_19:10781281-10792148:+|nuORF;nc|ENSG00000129351|Q12906-2|ILF3;nc|ENSG00000129351|Q12906-3|ILF3;nc|ENSG00000129351|Q12906-4|ILF3;nc|ENSG00000129351|Q12906-5|ILF3;nc|ENSG00000129351|Q12906-6|ILF3;nc|ENSG00000129351|Q12906|ILF3	104.0567914643314	0.06564926686336217	6				NaN	NaN	0	NaN	6693	3164	9858
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9860	27.523	NaN	37029	30	0	11616	0.106				-1	 	0	65	435.73706290554173	869.4595728778835	2	435.73736572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6694	3164	9858
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9861	27.526	NaN	23922	30	0	3704.5	0.106	+			42317	TAFGHPQAY	9	89	496.2345769296793	990.4546009261586	2	496.2350158691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TAFGHPQAY_	ENSG00000130340|ENST00000392185|SNX9	82.24051045832904	0.08786059719216216	6				NaN	NaN	0	NaN	6695	3164	9858
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9862	27.527	NaN	13134	30	0	2899.2	0.106	+			16896	HPIKQVDVL	9	77	524.8103440267964	1047.6061351203928	2	524.8114624023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HPIKQVDVL_	ENSG00000107960|ENST00000224950|STN1	76.7741389293348	0.11149722112137898	6				NaN	NaN	0	NaN	6696	3164	9858
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9863	27.529	NaN	21188	30	0	3092	0.106	+			36001	SEHVKLEQL	9	82	541.79611793448	NaN	0	541.7958984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SEHVKLEQL_	ARHGAP1|p.L237Cfs*135|2|0.38|ENSG00000175220|chr11:46680674-46680674|G/-|frameshift_variant;ARHGAP1|p.L237Rfs*135|1|0.37|ENSG00000175220|chr11:46680673-46680673|A/-|frameshift_variant;ENSG00000175220|ENST00000311956|ARHGAP1	138.06239232086	0.0004957345888817657	6				NaN	NaN	0	NaN	6697	3164	9858
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9864	27.531	NaN	11194	30	0	829.8	0.106	+			9278	EHIAYLQSL	9	96	537.2853410607613	1072.5561291883225	2	537.28564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EHIAYLQSL_	ENSG00000186871|ENST00000334463|ERCC6L	56.72105179125745	0.24094814563026265	6				NaN	NaN	0	NaN	6698	3164	9858
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9865	27.533	NaN	7707.5	30	0	436.6	0.034	+			12872	GEQVAVKSL	9	71	465.76624197148874	NaN	0	465.7659912109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GEQVAVKSL_	ENSG00000162434|ENST00000342505|JAK1;ENST00000481702.1_1_1:65305238-65306936:-|nuORF	89.02883481214508	0.043554178677197526	6				NaN	NaN	0	NaN	6699	3164	9858
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9883	27.57	NaN	29249	30	0	4354.4	0.214	+			38814	SSMVFTTSK	9	87	494.2437909513426	986.4730289694852	2	494.2442626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSMVFTTSK_	ENSG00000112818|ENST00000230588|MEP1A	109.43880257439609	0.029570636687953285	6				NaN	NaN	0	NaN	6714	3167	9882
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9884	27.574	NaN	13612	30	0	2295.6	0.106	+			17616	IEHGQAVSL	9	76	477.2557993991247	952.4970458650495	2	477.25592041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IEHGQAVSL_	ENSG00000112851|ENST00000284037|ERBIN;ENST00000506744.1_1_5:65372690-65374355:+|nuORF;nc|ENSG00000112851|Q96RT1-2|ERBIN;nc|ENSG00000112851|Q96RT1-3|ERBIN;nc|ENSG00000112851|Q96RT1-4|ERBIN;nc|ENSG00000112851|Q96RT1-5|ERBIN;nc|ENSG00000112851|Q96RT1-6|ERBIN;nc|ENSG00000112851|Q96RT1-7|ERBIN;nc|ENSG00000112851|Q96RT1-8|ERBIN;nc|ENSG00000112851|Q96RT1-9|ERBIN	63.53385203322761	0.18415635464017938	6				NaN	NaN	0	NaN	6715	3167	9882
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9885	27.576	NaN	14826	30	0	1409.3	0.106	+			1169	AENGKSNFL	9	84	490.2453991874127	978.4762454416255	2	490.2457275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AENGKSNFL_	B2M|p.V69Sfs*21|1|0.67|ENSG00000166710|chr15:44715554-44715555|-/A|frameshift_variant;B2M|p.V69Wfs*34|1|0.32|ENSG00000166710|chr15:44715555-44715555|A/-|frameshift_variant;B2M|p.Y98Lfs*5|1|0.08|ENSG00000166710|chr15:44715648-44715648|A/-|frameshift_variant;ENSG00000166710|ENST00000648006|B2M;ENST00000559720.5_1_15:45003705-45007919:+|nuORF	66.96192283764107	0.15557981141143568	6				NaN	NaN	0	NaN	6716	3167	9882
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9886	27.578	NaN	10452	30	0	4515.3	0.106	+			42318	TAFQGMLRK	9	59	351.19501745991516	1050.5632229799455	3	351.19549560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TAFQGMLRK_	ENSG00000143384|ENST00000369026|MCL1	32.81241826257853	0.4965981579233955	6				NaN	NaN	0	NaN	6717	3167	9882
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9887	27.58	NaN	9875.8	30	0	716.64	0.106	+			27775	MRPEQIMK	8	79	516.769095316457	1031.5236376997138	2	516.770263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MRPEQIMK_	ENSG00000185883|ENST00000330398|ATP6V0C	76.7741389293348	0.3504530765139327	6				NaN	NaN	0	NaN	6718	3167	9882
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9888	27.581	NaN	16553	30	0	9435.8	0.033	+			2203	ALPTGSRAL	9	71	443.26076631843455	884.5069797036691	2	443.2610778808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ALPTGSRAL_	ENSG00000005810|ENST00000544440|MYCBP2;MYCBP2|p.N1867Tfs*9|1|0.15|ENSG00000005810|chr13:77171572-77171572|T/-|frameshift_variant;MYCBP2|p.N3049*|1|0.11|ENSG00000005810|chr13:77097894-77097895|TT/-|frameshift_variant;MYCBP2|p.P4047Qfs*26|2|0.35|ENSG00000005810|chr13:77067782-77067782|G/-|frameshift_variant;MYCBP2|p.T1507Ffs*24|1|0.04|ENSG00000005810|chr13:77185189-77185190|-/TTGTAAA|frameshift_variant;MYCBP2|p.T4311Pfs*37|1|0.14|ENSG00000005810|chr13:77059619-77059619|G/-|frameshift_variant;MYCBP2|p.V3749*|1|0.12|ENSG00000005810|chr13:77081486-77081486|C/-|frameshift_variant;nc|ENSG00000005810|O75592-2|MYCBP2	52.936696900407355	0.27249468807391813	6				NaN	NaN	0	NaN	6719	3167	9882
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9889	27.582	NaN	6075.4	30	0	754.92	0.141	+			41271	SVLKEYNLK	9	79	547.3155291481304	1092.6165053630607	2	547.3165893554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVLKEYNLK_	nc|ENSG00000104973|Q71SY5-4|MED25	68.84614121027924	0.14577793175421136	6				NaN	NaN	0	NaN	6720	3167	9882
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9907	27.621	NaN	144050	30	0	101920	0.208				-1	 	0	78	460.2525651899413	918.4905774466827	2	460.2535095214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6735	3170	9906
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9908	27.625	NaN	25803	30	0	2693.9	0.106	+			15334	GTVIVDSTVGK	11	96	538.3024378887478	1074.5903228442955	2	538.3040161132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTVIVDSTVGK_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	114.71003974875822	0.030349694290893875	6				NaN	NaN	0	NaN	6736	3170	9906
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9909	27.627	NaN	8685.2	30	0	534.42	0.106	+			6889	CLNIRLAVK	9	88	515.3147387860026	1028.6149246388052	2	515.3161010742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_CLNIRLAVK_	ENSG00000136463|ENST00000258975|TACO1;ENST00000581120.1_1_17:61678442-61683801:+|nuORF	68.78682469695295	0.14603441672067394	6				NaN	NaN	0	NaN	6737	3170	9906
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9910	27.629	NaN	11989	30	0	6698	0.106			+	23414	LAASLARLGL	10	60	328.87768926858064	983.611238405942	3	328.878173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LAASLARLGL_	REV__COL17A1|p.P847Qfs*219|1|0.17|ENSG00000065618|chr10:104042431-104042431|G/-|frameshift_variant	17.364965105453717	0.7282106878714807	6				NaN	NaN	0	NaN	6738	3170	9906
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9911	27.631	NaN	7848.9	30	0	783.31	0.106	+			13640	GMLTGCSPAQR	11	87	560.7648700107582	1119.5151870883162	2	560.7666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GMLTGCSPAQR_	ENST00000374879.4_1_9:103235493-103235730:+|nuORF	42.86426827375447	0.5187511139693657	6				NaN	NaN	0	NaN	6739	3170	9906
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9912	27.632	NaN	11715	30	0	2045.3	0.036			+	10236	ETIILKQIK	9	90	543.3495173078207	1084.6844816824414	2	543.3510131835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ETIILKQIK_	REV__ENSG00000116120|ENST00000281828|FARSB;REV__FARSB|p.I265*|1|0.36|ENSG00000116120|chr2:222630168-222630168|T/-|frameshift_variant;REV__FARSB|p.I364Nfs*7|1|0.04|ENSG00000116120|chr2:222624353-222624354|-/AACACTCCTTATTG|frameshift_variant;REV__nc|ENSG00000116120|Q9NSD9-2|FARSB	49.536043120802724	0.308405419312776	6				NaN	NaN	0	NaN	6740	3170	9906
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9913	27.633	NaN	3778	30	0	448.35	0.142	+			33975	RSFEEAFQK	9	73	571.2848952561743	1140.5552375791485	2	571.2859497070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RSFEEAFQK_	CAD|p.N1541Mfs*15|1|0.33|ENSG00000084774|chr2:27237773-27237773|A/-|frameshift_variant;CAD|p.Q1172Tfs*37|1|0.41|ENSG00000084774|chr2:27234113-27234114|-/C|frameshift_variant;CAD|p.Q902Hfs*2|1|0.42|ENSG00000084774|chr2:27232507-27232508|AG/-|frameshift_variant;ENSG00000084774|ENST00000264705|CAD	66.96192283764107	0.15557981141143568	6				NaN	NaN	0	NaN	6741	3170	9906
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9931	27.671	NaN	44322	30	0	11972	0.214	+			39751	STITGVMDK	9	87	476.24338622448755	950.4722195157751	2	476.2438049316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STITGVMDK_	ENSG00000147872|ENST00000276914|PLIN2;PLIN2|p.V348*|1|0.15|ENSG00000147872|chr9:19116520-19116520|C/-|frameshift_variant	134.7655990226056	0.012935733000282069	6				NaN	NaN	0	NaN	6756	3173	9930
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9932	27.675	NaN	13725	30	0	3855.5	0.106			+	29379	PALHATAP	8	65	389.215983796695	776.41741466019	2	389.2160339355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PALHATAP_	REV__ENST00000545910.1_1_19:45641863-45643897:+|nuORF	35.200714571348534	0.6875396545722289	6				NaN	NaN	0	NaN	6757	3173	9930
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9933	27.677	NaN	50216	30	0	6733.5	0.106				-1	QCKKCGKSF	9	92	543.2657428116049	1084.5169326900098	2	543.2662963867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_QC(Carbamidomethyl (C))KKCGKSF_	ENSG00000197013|ENST00000358491|ZNF429;ZNF429|p.H387Qfs*13|1|0.26|ENSG00000197013|chr19:21537213-21537214|AT/-|frameshift_variant	116.90359126533652	0.02307425081617795	6				NaN	NaN	0	NaN	6758	3173	9930
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9934	27.679	NaN	8193.4	30	0	630.66	0.106	+			50694	YEENSHLTSV	10	80	589.7690580011853	1177.5235630691705	2	589.769775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YEENSHLTSV_	ENSG00000157557|ENST00000360938|ETS2	133.9934435666947	0.012355562819581703	6				NaN	NaN	0	NaN	6759	3173	9930
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9935	27.681	NaN	14057	30	0	1673.9	0.106				-1	 	0	89	493.8152682323694	985.6159835315389	2	493.8153076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6760	3173	9930
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9936	27.682	NaN	8791	30	0	2537.7	0.034	+			10846	FASQQGMTA	9	71	470.71235673440185	939.4101605356037	2	470.7124938964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FASQQGMTA_	ENSG00000130176|ENST00000252456|CNN1;nc|ENSG00000130176|P51911-2|CNN1	93.5975768576971	0.05472259948179787	6				NaN	NaN	0	NaN	6761	3173	9930
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9937	27.683	NaN	8337.7	30	0	1027.8	0.14			+	26293	LSVALFHFA	9	79	502.78331866904574	1003.5520844048915	2	502.779541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSVALFHFA_	REV__ENSG00000168306|ENST00000302819|ACOX2	50.0245360154114	0.3026755932229825	6				NaN	NaN	0	NaN	6762	3173	9930
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9955	27.722	NaN	42152	30	0	7184.8	0.214				-1	 	0	99	494.8046938430466	987.5948347528932	2	494.80517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6777	3176	9954
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9956	27.726	NaN	19310	30	0	11253	0.106	+			37489	SLKRRQKT	8	62	339.5492058822281	1015.6257882468842	3	339.54974365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLKRRQKT_	ENSG00000198300|ENST00000326441|PEG3;nc|ENSG00000198300|Q9GZU2-2|PEG3;nc|ENSG00000198300|Q9GZU2-4|PEG3;PEG3|p.T824Nfs*10|1|0.16|ENSG00000198300|chr19:56815956-56815971|TCCCTTCCTTCAGAGG/-|frameshift_variant	35.61828744233558	0.6843154725607303	6				NaN	NaN	0	NaN	6778	3176	9954
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9957	27.728	NaN	23846	30	0	2001.5	0.106				-1	 	0	88	519.3022987567382	1036.5900445802763	2	519.302978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6779	3176	9954
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9958	27.73	NaN	29918	30	0	7909.7	0.106	+			4485	ATITDKELLK	10	81	377.8919474145776	NaN	0	377.8919677734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATITDKELLK_	ENSG00000131503|ENST00000360839|ANKHD1;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	66.9202029811203	0.17776675719981952	6				NaN	NaN	0	NaN	6780	3176	9954
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9959	27.732	NaN	13555	30	0	2301.3	0.106				-1	 	0	76	478.2450055548447	954.4754581764894	2	478.2453918457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6781	3176	9954
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9960	27.733	NaN	9382.5	30	0	1737.3	0.035			+	7467	DGAGCRETLS	10	68	504.72508416165397	1007.435615390108	2	504.7259521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DGAGCRETLS_	REV__ENST00000426537.1_1_21:47705768-47706077:-|nuORF	74.25504064058377	0.24255678544297835	6				NaN	NaN	0	NaN	6782	3176	9954
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9961	27.734	NaN	8110.5	30	0	1456	0.141	+			38395	SRVVLSTSTQ	10	82	539.2979449492675	1076.581336965335	2	539.7982788085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SRVVLSTSTQ_	nc|ENSG00000176973|Q8N5H3-2|FAM89B	38.714083909724	0.5609941533943991	6				NaN	NaN	0	NaN	6783	3176	9954
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9979	27.774	NaN	30593	30	0	8344.5	0.214	+			48927	VVDQTTLMK	9	83	517.7800667565679	1033.5455805799356	2	517.78076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVDQTTLMK_	ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;TRRAP-ASNS|1|fusion;TRRAP-ASNS|2|fusion;TRRAP|p.A1620Cfs*35|1|0.27|ENSG00000196367|chr7:98949499-98949500|-/G|frameshift_variant;TRRAP|p.I564Hfs*9|1|0.29|ENSG00000196367|chr7:98910389-98910390|-/G|frameshift_variant;TRRAP|p.K3443Sfs*19|1|0.28|ENSG00000196367|chr7:99004246-99004246|A/-|frameshift_variant;TRRAP|p.L291*|1|0.36|ENSG00000196367|chr7:98900691-98900691|T/-|frameshift_variant;TRRAP|p.P1292Lfs*17|1|0.44|ENSG00000196367|chr7:98933258-98933258|C/-|frameshift_variant;TRRAP|p.P1360Afs*14|1|0.05|ENSG00000196367|chr7:98935641-98935642|-/GCAAATAA|frameshift_variant	148.6902309647307	0.00717441509122429	6				NaN	NaN	0	NaN	6798	3179	9978
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9980	27.777	NaN	28510	30	0	8360.4	0.106	+			50899	YGAVPSGF	8	78	399.19486521233665	796.3751774914733	2	399.1949157714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YGAVPSGF_	DOK7|p.S422Hfs*34|2|0.24|ENSG00000175920|chr4:3493243-3493243|C/-|frameshift_variant;ENSG00000175920|ENST00000340083|DOK7;nc|ENSG00000175920|Q18PE1-3|DOK7;nc|ENSG00000175920|Q18PE1-4|DOK7	46.76643321282427	0.6143254112625767	6				NaN	NaN	0	NaN	6799	3179	9978
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9981	27.779	NaN	8076.6	30	0	2566	0.106				-1	 	0	58	329.2190835847691	656.4236142363383	2	329.2195739746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6800	3179	9978
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9982	27.781	NaN	12572	30	0	6523.4	0.106				-1	 	0	60	441.7875221860056	881.5604914388113	2	441.7876281738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6801	3179	9978
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9983	27.783	NaN	15908	30	0	2708.4	0.106			+	9804	EPDIPGFDK	9	86	509.24716921213684	1016.4797854910737	2	509.2470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EPDIPGFDK_	REV__ENSG00000213339|ENST00000250237|QTRT1;REV__ENST00000587500.5_1_19:10823370-10823943:+|nuORF	54.776311868738084	0.25715957988447635	6				NaN	NaN	0	NaN	6802	3179	9978
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9984	27.785	NaN	4962.3	30	0	532.71	0.033			+	26310	LSVQLSVV	8	66	422.7599689056999	843.5053848781998	2	422.7603454589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSVQLSVV_	REV__ENSG00000069329|ENST00000299138|VPS35;REV__ENST00000568784.6_1_16:46694386-46722246:-|nuORF	54.776311868738084	0.5534952410049249	6				NaN	NaN	0	NaN	6803	3179	9978
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9985	27.785	NaN	9957.9	30	0	2011.2	0.139	+			9464	EKPKLQPP	8	65	468.7787845492336	935.5430161652672	2	468.779052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EKPKLQPP_	ENST00000565652.1_1_15:75660495-75660924:-|nuORF	37.15910966729921	0.6739408393984688	6				NaN	NaN	0	NaN	6804	3179	9978
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10003	27.823	NaN	163620	30	0	67991	0.214				-1	 	0	97	359.23722243838125	1074.6898379153438	3	359.2377014160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6819	3182	10002
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10004	27.826	NaN	50246	30	0	22895	0.106				-1	 	0	79	330.874055289744	989.600336469432	3	330.8746643066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6820	3182	10002
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10005	27.829	NaN	20991	30	0	1851.8	0.106				-1	RSSTRLQM	8	87	497.75812218738514	993.5016914415703	2	497.7587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_RSSTRLQM(Oxidation (M))_	ENST00000278823.6_1_11:62366051-62368981:-|nuORF;ENST00000527204.5_2_11:62366051-62368578:-|nuORF	66.42927471994793	0.4381325844043345	6				NaN	NaN	0	NaN	6821	3182	10002
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10006	27.83	NaN	57525	30	0	23216	0.106	+			15246	GTTAVFINK	9	82	475.76821557702164	949.5218782208433	2	475.76873779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTTAVFINK_	ASH1L|p.H1793Ifs*7|1|0.13|ENSG00000116539|chr1:155438778-155438778|G/-|frameshift_variant;ASH1L|p.I970Lfs*9|1|0.2|ENSG00000116539|chr1:155479962-155479962|T/-|frameshift_variant;ASH1L|p.K1222Rfs*11|4|0.27|ENSG00000116539|chr1:155479205-155479205|T/-|frameshift_variant;ASH1L|p.K1533Sfs*17|1|0.25|ENSG00000116539|chr1:155478272-155478272|T/-|frameshift_variant;ASH1L|p.K2377Nfs*5|1|0.28|ENSG00000116539|chr1:155354570-155354570|T/-|frameshift_variant;ASH1L|p.N1822Tfs*2|1|0.33|ENSG00000116539|chr1:155438690-155438690|T/-|frameshift_variant;ASH1L|p.R712Efs*23|3|0.35|ENSG00000116539|chr1:155480736-155480736|T/-|frameshift_variant;ASH1L|p.S2309Ifs*11|1|0.64|ENSG00000116539|chr1:155357635-155357636|-/T|frameshift_variant;ENSG00000116539|ENST00000392403|ASH1L;nc|ENSG00000116539|Q9NR48|ASH1L	166.67852932204877	0.003333876602083393	6				NaN	NaN	0	NaN	6822	3182	10002
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10007	27.832	NaN	35190	30	0	13382	0.106				-1	 	0	77	369.54454352932896	1105.611801188187	3	369.5448913574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6823	3182	10002
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10008	27.834	NaN	8133.6	30	0	951.55	0.032			+	20800	KIAPLHAG	8	65	403.74745734939603	805.4803617655921	2	403.7476806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KIAPLHAG_	REV__ENST00000594582.1_1_19:49218521-49220230:-|nuORF	46.76643321282427	0.6143254112625767	6				NaN	NaN	0	NaN	6824	3182	10002
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10009	27.835	NaN	12712	30	0	716.68	0.142	+			2430	APFEQAGQKY	10	84	569.779420389488	1137.544287845776	2	569.7803344726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_APFEQAGQKY_	ENSG00000177106|ENST00000318562|EPS8L2;ENST00000526909.5_1_11:710402-726978:+|nuORF;ENST00000527832.5_1_11:724661-726978:+|nuORF;ENST00000531393.5_1_11:721935-726978:+|nuORF;EPS8L2|p.V669Gfs*33|1|0.13|ENSG00000177106|chr11:726690-726690|T/-|frameshift_variant;nc|ENSG00000177106|Q9H6S3-2|EPS8L2;nc|ENSG00000177106|Q9H6S3-3|EPS8L2	114.8945686534367	0.03454040281423369	6				NaN	NaN	0	NaN	6825	3182	10002
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10028	27.872	NaN	58799	30	0	10680	0.19			+	30217	PSRTPFEEVL	10	91	392.208079184663	1173.602408154189	3	392.2082214355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PSRTPFEEVL_	REV__ENST00000354869.7_1_22:51206987-51207044:-|nuORF	74.25504064058377	0.24255678544297835	6				NaN	NaN	0	NaN	6841	3185	10027
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10029	27.875	NaN	39414	30	0	5670	0.106				-1	 	0	86	511.7787807978358	1021.5430086624716	2	511.7794189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6842	3185	10027
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10030	27.877	NaN	33484	30	0	5678.7	0.106			+	7683	DLGRSAMD	8	65	440.69494847743744	879.3753440216749	2	440.69525146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_DLGRSAM(Oxidation (M))D_	REV__DDX49|p.V307M|1|0.23|ENSG00000105671|chr19:18924689-18924689|G/A|missense_variant	65.80317337860623	0.44433089765398776	6				NaN	NaN	0	NaN	6843	3185	10027
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10031	27.879	NaN	26387	30	0	3788	0.106				-1	 	0	92	587.8081044560423	1173.6016559788845	2	587.80908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6844	3185	10027
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10032	27.881	NaN	13127	30	0	4838.7	0.106			+	18081	IKKRRAKS	8	62	329.5578687034413	985.6517767105238	3	329.5584411621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IKKRRAKS_	REV__ENSG00000099365|ENST00000215095|STX1B;REV__ENSG00000106089|ENST00000222812|STX1A	18.324413293986947	0.7971860551947066	6				NaN	NaN	0	NaN	6845	3185	10027
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10033	27.883	NaN	12090	30	0	4867.6	0.106				-1	 	0	68	557.7976096492664	1113.5806663653327	2	557.7985229492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6846	3185	10027
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10034	27.885	NaN	8288.7	30	0	889.3	0.036	+			37277	SLAHIQATGAQ	11	79	548.7919586317649	1095.5693643303298	2	548.7932739257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SLAHIQATGAQ_	sp|F5HG98|UL38_HCMVMApoptosisinhibitorUL38OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL38PE=1SV=1;sp|P16779|UL38_HCMVAApoptosisinhibitorUL38OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL38PE=3SV=1	53.08895987439943	0.38514566451266113	6				NaN	NaN	0	NaN	6847	3185	10027
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10052	27.919	NaN	267050	30	0	209610	0.152				-1	 	0	61	343.19840796418725	684.3822629951745	2	343.1988220214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6862	3188	10051
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10053	27.922	NaN	14503	30	0	1257.8	0.106			+	27830	MSRSREKAK	9	87	554.7977590614441	1107.5809651896882	2	554.7988891601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_M(Oxidation (M))SRSREKAK_	REV__ENSG00000173320|ENST00000308497|STOX2;REV__nc|ENSG00000173320|Q9P2F5-2|STOX2	101.60071028292904	0.0375685401170269	6				NaN	NaN	0	NaN	6863	3188	10051
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10054	27.924	NaN	22155	30	0	5584.8	0.106				-1	 	0	83	506.230982046206	1010.447411159212	2	506.2315979003906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6864	3188	10051
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10055	27.925	NaN	32698	30	0	10004	0.106			+	36709	SGSPSPSAVK	10	90	458.73947525297467	915.4643975727494	2	458.74005126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SGSPSPSAVK_	REV__ENSG00000160194|ENST00000354250|NDUFV3	58.22992032128504	0.38193887838457763	6				NaN	NaN	0	NaN	6865	3188	10051
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10056	27.927	NaN	11082	30	0	1281.6	0.106			+	-1	MLEKMFSI	8	80	515.7512445640255	NaN	0	515.7515258789062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Oxidation (M)	_M(Oxidation (M))LEKM(Oxidation (M))FSI_	REV__ENSG00000011485|ENST00000012443|PPP5C;REV__ENST00000527193.1_1_19:46878896-46886865:+|nuORF;REV__PPP5C|p.T187A|1|0.4|ENSG00000011485|chr19:46376500-46376500|A/G|missense_variant	57.81127852772723	1.7418937515398478	6				NaN	NaN	0	NaN	6866	3188	10051
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10057	27.929	NaN	23434	30	0	3832.6	0.106	+			38091	SPTNTVHMY	9	86	525.2391964783843	1048.4638400235685	2	525.2394409179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SPTNTVHMY_	ENSG00000138592|ENST00000307179|USP8;nc|ENSG00000138592|P40818-2|USP8;USP8|p.K997Rfs*2|1|0.11|ENSG00000138592|chr15:50497178-50497178|A/-|frameshift_variant	136.26810882979174	0.012230845423532208	6				NaN	NaN	0	NaN	6867	3188	10051
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10058	27.931	NaN	12820	30	0	1878	0.034	+			42325	TAGAVTQCY	9	87	485.71783592984144	969.4211189264829	2	485.71832275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_TAGAVTQC(Carbamidomethyl (C))Y_	ENSG00000105640|ENST00000222247|RPL18A	68.84614121027924	0.14577793175421136	6				NaN	NaN	0	NaN	6868	3188	10051
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10059	27.931	NaN	8698.9	30	0	2986.8	0.139			+	30444	PYQVNKAL	8	75	466.76336957174857	931.5121862102972	2	466.76361083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_PYQVNKAL_	REV__ENSG00000223443|ENST00000333796|USP17L2;REV__ENSG00000225327|ENST00000530484|USP17L3;REV__ENSG00000226430|ENST00000530447|USP17L7;REV__ENSG00000230549|ENST00000529559|USP17L1;REV__ENSG00000236125|ENST00000526929|USP17L4;REV__ENSG00000237038|ENST00000527080|USP17L8	44.53106598305862	0.628196326904373	6				NaN	NaN	0	NaN	6869	3188	10051
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10077	27.97	NaN	72419	30	0	59195	0.214			+	43850	TLVLDICYGDL	11	57	408.8775008855072	1223.6106732567216	3	408.8778991699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TLVLDICYGDL_	REV__ENST00000295958.9_2_4:39558096-39558138:-|nuORF	30.568863376406313	0.6691487505135859	6				NaN	NaN	0	NaN	6884	3191	10076
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10078	27.973	NaN	20401	30	0	2776.9	0.106			+	27935	MVERQFPV	8	82	503.26353502882637	1004.5125171244528	2	503.26422119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MVERQFPV_	REV__tr|U7T735|U7T735_FUSNUPhageterminaselargesubunitOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00101PE=3SV=1	40.77816245573522	0.6514838689002179	6				NaN	NaN	0	NaN	6885	3191	10076
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10079	27.975	NaN	34967	30	0	8497.1	0.106			+	42573	TASQIGLVQ	9	94	458.7583433455662	NaN	0	458.7584228515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TASQIGLVQ_	REV__ENST00000425974.5_1_2:13107317-13107404:-|nuORF	64.20726635412375	0.13137488984569443	6				NaN	NaN	0	NaN	6886	3191	10076
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10080	27.977	NaN	11343	30	0	753.91	0.106	+			35255	SALHIAIEK	9	90	491.2911510069711	NaN	0	491.2900695800781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SALHIAIEK_	ENSG00000187688|ENST00000338560|TRPV2;TRPV2|p.I444Sfs*23|3|0.39|ENSG00000187688|chr17:16427521-16427521|G/-|frameshift_variant	66.96192283764107	0.11962625698446946	6				NaN	NaN	0	NaN	6887	3191	10076
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10081	27.979	NaN	9308.8	30	0	1003.1	0.106	+			20576	KFTPVASKF	9	87	512.794328142428	1023.5741033516559	2	512.794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KFTPVASKF_	ENSG00000159840|ENST00000322764|ZYX;ENST00000446634.1_1_7:143080130-143081191:+|nuORF;nc|ENSG00000159840|Q15942-2|ZYX	91.26522074875469	0.06129826844580791	6				NaN	NaN	0	NaN	6888	3191	10076
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10082	27.981	NaN	13487	30	0	2454.3	0.038	+			23305	KYPNMFKKI	9	79	390.2228155423582	1167.6466172272746	3	390.5600891113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KYPNMFKKI_	ENSG00000158467|ENST00000325006|AHCYL2;ENST00000492628.1_1_7:129040195-129045055:+|nuORF;nc|ENSG00000158467|Q96HN2-2|AHCYL2;nc|ENSG00000158467|Q96HN2-3|AHCYL2;nc|ENSG00000158467|Q96HN2-4|AHCYL2;TNPO3-AHCYL2|1|fusion	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	6889	3191	10076
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10083	27.981	NaN	11427	30	0	971.85	0.141	+			4763	ATNAACASLLK	11	85	560.2939716431522	1118.5733903531043	2	560.29541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_ATNAAC(Carbamidomethyl (C))ASLLK_	ENSG00000134996|ENST00000346234|OSTF1;OSTF1|p.K191Rfs*11|1|0.32|ENSG00000134996|chr9:75140914-75140914|A/-|frameshift_variant	149.94371410395783	7.060590642135954E-05	6				NaN	NaN	0	NaN	6890	3191	10076
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10101	28.02	NaN	99790	30	0	22389	0.183	+			41801	SVSQPIMVQR	10	96	572.8099168960485	1143.605280858897	2	572.810791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSQPIMVQR_	ENSG00000134644|ENST00000426105|PUM1;nc|ENSG00000134644|Q14671-2|PUM1;nc|ENSG00000134644|Q14671|PUM1	183.85253310579768	0.0008507193790682447	6				NaN	NaN	0	NaN	6905	3194	10100
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10102	28.023	NaN	118990	30	0	30551	0.106	+			39471	STFDTQITK	9	100	520.7659590571969	1039.5173651811938	2	520.7665405273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STFDTQITK_	ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC;PRKDC|p.D2437Wfs*3|1|0.11|ENSG00000253729|chr8:47840161-47840162|-/CA|frameshift_variant;PRKDC|p.K3681Nfs*6|1|0.32|ENSG00000253729|chr8:47785174-47785177|TTCT/-|frameshift_variant;PRKDC|p.M3670*|1|0.5|ENSG00000253729|chr8:47785212-47785212|T/-|frameshift_variant;PRKDC|p.M3846Cfs*12|1|0.13|ENSG00000253729|chr8:47779047-47779047|T/-|frameshift_variant;PRKDC|p.M4020Cfs*2|1|0.31|ENSG00000253729|chr8:47776968-47776968|T/-|frameshift_variant;PRKDC|p.N3605Kfs*3|1|0.22|ENSG00000253729|chr8:47788993-47788994|-/T|frameshift_variant;PRKDC|p.N4037Ifs*15|1|0.17|ENSG00000253729|chr8:47776916-47776916|T/-|frameshift_variant;PRKDC|p.R2704Gfs*13|2|0.34|ENSG00000253729|chr8:47834238-47834238|T/-|frameshift_variant;PRKDC|p.S3402Ifs*16|1|0.04|ENSG00000253729|chr8:47799302-47799303|-/AAACCGTGAGTTAGAGGAGGTAA|frameshift_variant;PRKDC|p.S4099Qfs*6|1|0.25|ENSG00000253729|chr8:47774265-47774265|A/-|frameshift_variant;PRKDC|p.T3268Pfs*7|1|0.5|ENSG00000253729|chr8:47803426-47803426|T/-|frameshift_variant;PRKDC|p.W3401Cfs*4|1|0.01|ENSG00000253729|chr8:47799304-47799305|-/AATGAATA|frameshift_variant	223.32071464388096	5.863022754720228E-10	6				NaN	NaN	0	NaN	6906	3194	10100
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10103	28.025	NaN	69455	30	0	27795	0.106	+			33030	REIQTAVRL	9	101	543.324040851072	1084.633528768944	2	543.3250732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_REIQTAVRL_	ENSG00000124635|ENST00000339812|H2BC11;ENSG00000146047|ENST00000274764|H2BC1;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;nc|ENSG00000203814|Q5QNW6-2|H2BC18	82.83050618871818	0.08530945204495013	6				NaN	NaN	0	NaN	6907	3194	10100
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10104	28.027	NaN	17819	30	0	3700.4	0.106	+			39531	STFSAPLNK	9	86	482.75708724279076	963.4996215523815	2	482.7581481933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STFSAPLNK_	ENSG00000163026|ENST00000295148|WDCP;nc|ENSG00000163026|Q9H6R7-2|WDCP	107.00750918261382	0.032051501805654005	6				NaN	NaN	0	NaN	6908	3194	10100
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10105	28.029	NaN	18782	30	0	2819.8	0.106			+	22879	KVLGPGPVSGP	11	87	504.2978222510285	NaN	0	504.2976989746094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KVLGPGPVSGP_	REV__ENSG00000204843|ENST00000628224|DCTN1;REV__nc|ENSG00000204843|Q14203-2|DCTN1;REV__nc|ENSG00000204843|Q14203-3|DCTN1;REV__nc|ENSG00000204843|Q14203-4|DCTN1;REV__nc|ENSG00000204843|Q14203-5|DCTN1;REV__nc|ENSG00000204843|Q14203-6|DCTN1	39.252832667884924	0.39048276625972167	6				NaN	NaN	0	NaN	6909	3194	10100
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10106	28.03	NaN	19302	30	0	7852.3	0.106	+			30521	QAHLKVDVY	9	86	536.7923653571265	1071.570177781053	2	536.7930297851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QAHLKVDVY_	ENSG00000130383|ENST00000588525|FUT5;ENSG00000156413|ENST00000318336|FUT6;ENSG00000171124|ENST00000303225|FUT3;nc|ENSG00000156413|P51993-2|FUT6	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	6910	3194	10100
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10107	28.032	NaN	14430	30	0	2052.8	0.035	+			7273	DANPETHAF	9	76	501.2191744864541	1000.4237960397082	2	501.219482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DANPETHAF_	ENSG00000100412|ENST00000216254|ACO2	54.776311868738084	0.25715957988447635	6				NaN	NaN	0	NaN	6911	3194	10100
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10125	28.068	NaN	114760	30	0	27350	0.119	+			22658	KTYGEIFEK	9	80	557.7919936094917	1113.5694342857832	2	557.7926635742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTYGEIFEK_	ENSG00000151366|ENST00000281031|NDUFC2;nc|ENSG00000151366|O95298-2|NDUFC2	142.36107225718385	0.009372392051035914	6				NaN	NaN	0	NaN	6926	3197	10124
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10126	28.07	NaN	226450	30	0	68003	0.106	+			4449	ATILAGDVKVK	11	117	372.23221082472367	1113.674803074371	3	372.2323913574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATILAGDVKVK_	ENSG00000119669|ENST00000238647|IRF2BPL;ENSG00000168264|ENST00000366609|IRF2BP2;nc|ENSG00000168264|Q7Z5L9-2|IRF2BP2;nc|ENSG00000168264|Q7Z5L9-3|IRF2BP2	98.75417337143367	0.06326268080394254	6				NaN	NaN	0	NaN	6927	3197	10124
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10127	28.072	NaN	24185	30	0	4171	0.106	+			16499	HETSNINDF	9	92	538.7352014004398	1075.4558498676795	2	538.7361450195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HETSNINDF_	ENSG00000135821|ENST00000331872|GLUL;ENST00000603996.1_1_5:151230113-151230284:+|nuORF	93.5975768576971	0.05472259948179787	6				NaN	NaN	0	NaN	6928	3197	10124
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10128	28.074	NaN	9324.5	30	0	1420.4	0.106				-1	 	0	75	493.8152682323694	985.6159835315389	2	493.8155822753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6929	3197	10124
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10129	28.076	NaN	15056	30	0	2518.7	0.106				-1	 	0	82	347.8777748780458	1040.6114952343373	3	347.8781433105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6930	3197	10124
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10130	28.078	NaN	19982	30	0	3721.7	0.106	+			5162	ATSVYLVQK	9	83	504.79074604012106	NaN	0	504.7899475097656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATSVYLVQK_	DIS3L2|p.I516Ffs*15|1|0.43|ENSG00000144535|chr2:232263321-232263321|C/-|frameshift_variant;DIS3L2|p.L768Pfs*56|1|0.27|ENSG00000144535|chr2:232334638-232334639|-/C|frameshift_variant;DIS3L2|p.P612Rfs*33|1|0.4|ENSG00000144535|chr2:232329903-232329903|C/-|frameshift_variant;ENSG00000144535|ENST00000325385|DIS3L2;ENST00000433430.5_1_2:233103253-233124568:+|nuORF;ENST00000445090.5_1_2:233028172-233195406:+|nuORF;nc|ENSG00000144535|Q8IYB7-2|DIS3L2;nc|ENSG00000144535|Q8IYB7-3|DIS3L2	132.757866228626	0.00016231815605623974	6				NaN	NaN	0	NaN	6931	3197	10124
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10131	28.079	NaN	11585	30	0	796.79	0.033	+			15367	GTVVGLVNK	9	79	443.77116710596613	885.5277812787323	2	443.77130126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GTVVGLVNK_	ASH1L|p.H1793Ifs*7|1|0.13|ENSG00000116539|chr1:155438778-155438778|G/-|frameshift_variant;ASH1L|p.I970Lfs*9|1|0.2|ENSG00000116539|chr1:155479962-155479962|T/-|frameshift_variant;ASH1L|p.K1222Rfs*11|4|0.27|ENSG00000116539|chr1:155479205-155479205|T/-|frameshift_variant;ASH1L|p.K1533Sfs*17|1|0.25|ENSG00000116539|chr1:155478272-155478272|T/-|frameshift_variant;ASH1L|p.K2377Nfs*5|1|0.28|ENSG00000116539|chr1:155354570-155354570|T/-|frameshift_variant;ASH1L|p.N1822Tfs*2|1|0.33|ENSG00000116539|chr1:155438690-155438690|T/-|frameshift_variant;ASH1L|p.R712Efs*23|3|0.35|ENSG00000116539|chr1:155480736-155480736|T/-|frameshift_variant;ASH1L|p.S2309Ifs*11|1|0.64|ENSG00000116539|chr1:155357635-155357636|-/T|frameshift_variant;ENSG00000116539|ENST00000392403|ASH1L;nc|ENSG00000116539|Q9NR48|ASH1L	79.71258880314673	0.09879134589249085	6				NaN	NaN	0	NaN	6932	3197	10124
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10132	28.08	NaN	7682.7	30	0	839.86	0.142	+			33800	RQIPYTMMK	9	75	584.3035560666763	1166.5925592001524	2	584.304443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_RQIPYTMMK_	ENSG00000075415|ENST00000552981|SLC25A3;ENST00000546766.5_1_12:98989476-98995303:+|nuORF;ENST00000551123.5_1_12:98989412-98995303:+|nuORF;nc|ENSG00000075415|Q00325|SLC25A3	101.45984612302182	0.0377122763612125	6				NaN	NaN	0	NaN	6933	3197	10124
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10150	28.119	NaN	10293	30	0	1116.6	0.214				-1	 	0	66	422.74749164634915	843.4804303594983	2	422.74798583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6948	3200	10149
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10151	28.123	NaN	16323	30	0	3049.2	0.106	+			3235	ASLATTLTK	9	69	453.26822950977976	904.5219060863595	2	453.26885986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASLATTLTK_	ENSG00000129083|ENST00000439561|COPB1;ENST00000526191.1_1_11:14496007-14497407:-|nuORF	150.36159442982594	0.006784847064083231	6				NaN	NaN	0	NaN	6949	3200	10149
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10152	28.125	NaN	7839.8	30	0	507.33	0.106			+	25041	LLIEVSLR	8	77	471.8024129320357	941.5902729308714	2	471.80267333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LLIEVSLR_	REV__ENSG00000196455|ENST00000356763|PIK3R4	38.80614096846853	0.6637206697844082	6				NaN	NaN	0	NaN	6950	3200	10149
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10153	28.127	NaN	7141.4	30	0	546.83	0.106			+	22602	KTTKKSLYK	9	71	366.2286264288675	1095.6640498868026	3	366.22894287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTTKKSLYK_	REV__ENSG00000163527|ENST00000295770|STT3B	44.377184641726394	0.36891676396732553	6				NaN	NaN	0	NaN	6951	3200	10149
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10154	28.129	NaN	8720.3	30	0	858.33	0.106	+			31448	QKRVPCAY	8	84	482.75708724279076	963.4996215523815	2	483.2574462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QKRVPCAY_	ENSG00000099942|ENST00000354336|CRKL	44.53106598305862	0.628196326904373	6				NaN	NaN	0	NaN	6952	3200	10149
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10155	28.131	NaN	11526	30	0	2966	0.038	+			23306	KYPNMFKKI	9	80	390.2228155423582	1167.6466172272746	3	390.2231750488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KYPNMFKKI_	ENSG00000158467|ENST00000325006|AHCYL2;ENST00000492628.1_1_7:129040195-129045055:+|nuORF;nc|ENSG00000158467|Q96HN2-2|AHCYL2;nc|ENSG00000158467|Q96HN2-3|AHCYL2;nc|ENSG00000158467|Q96HN2-4|AHCYL2;TNPO3-AHCYL2|1|fusion	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	6953	3200	10149
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10156	28.131	NaN	6203.2	30	0	1248.9	0.138	+			26576	LTTLGAPRA	9	65	450.2672024983895	898.519852063579	2	450.2691345214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LTTLGAPRA_	ENSG00000167261|ENST00000393847|DPEP2;ENST00000268795.5_1_16:68025981-68027124:-|nuORF;nc|ENSG00000167261|Q9H4A9-3|DPEP2	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	6954	3200	10149
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10174	28.171	NaN	45100	30	0	4705.2	0.214	+			44123	TPYRVTFE	8	102	506.75775940824815	1011.5009658832963	2	506.7583312988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TPYRVTFE_	ENSG00000165802|ENST00000371475|NSMF;ENST00000371482.5_2_9:140343848-140347544:-|nuORF;nc|ENSG00000165802|Q6X4W1-2|NSMF;nc|ENSG00000165802|Q6X4W1-3|NSMF;nc|ENSG00000165802|Q6X4W1-4|NSMF;nc|ENSG00000165802|Q6X4W1-6|NSMF	90.77665401227738	0.27511901818546464	6				NaN	NaN	0	NaN	6969	3203	10173
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10175	28.174	NaN	49736	30	0	12544	0.106	+			30157	PSDSHFKITF	10	90	393.53269380672657	1177.5762520203798	3	393.5328369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PSDSHFKITF_	ENSG00000189057|ENST00000343597|FAM111B;FAM111B|p.I283Lfs*16|1|0.32|ENSG00000189057|chr11:59124938-59124938|A/-|frameshift_variant;FAM111B|p.I433Vfs*2|1|0.04|ENSG00000189057|chr11:59125393-59125394|-/GTTTG|frameshift_variant;FAM111B|p.N499Tfs*10|1|0.11|ENSG00000189057|chr11:59125589-59125589|A/-|frameshift_variant;FAM111B|p.Q276Hfs*6|1|0.07|ENSG00000189057|chr11:59124924-59124925|-/T|frameshift_variant;nc|ENSG00000189057|Q6SJ93-2|FAM111B	37.50817390946774	0.5721060100277453	6				NaN	NaN	0	NaN	6970	3203	10173
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10176	28.176	NaN	23336	30	0	3443.5	0.106				-1	 	0	85	454.2469144394854	906.4792759457708	2	454.24737548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6971	3203	10173
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10177	28.178	NaN	27021	30	0	3695.3	0.106	+			40538	SVAALPVCK	9	76	472.7635923080272	943.5126316828545	2	472.7635192871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_SVAALPVC(Carbamidomethyl (C))K_	ENSG00000007255|ENST00000585934|TRAPPC6A;nc|ENSG00000007255|O75865-2|TRAPPC6A	74.25504064058377	0.12238981753128622	6				NaN	NaN	0	NaN	6972	3203	10173
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10178	28.18	NaN	17433	30	0	6288.6	0.106				-1	 	0	73	359.23722243838125	1074.6898379153438	3	359.2376403808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6973	3203	10173
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10179	28.182	NaN	46779	30	0	5328.1	0.036	+			2690	AQNSVIIVDK	10	106	543.8106869131218	1085.6068208930435	2	543.8117065429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AQNSVIIVDK_	ENSG00000072274|ENST00000360110|TFRC	176.59839592901017	0.0015875574101036562	6				NaN	NaN	0	NaN	6974	3203	10173
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10180	28.182	NaN	13630	30	0	4149.9	0.143	+			38969	SSRRRLHP	8	57	336.86542435480834	1007.574443664625	3	336.865966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSRRRLHP_	ZBTB22|p.S410Pfs*45|2|0.26|ENSG00000236104|chr6:33315690-33315690|G/-|frameshift_variant	26.79610172149135	0.7524337208463756	6				NaN	NaN	0	NaN	6975	3203	10173
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10198	28.222	NaN	139720	30	0	20668	0.203	+			3749	ATADLALGR	9	109	444.25037874409526	886.4862045549905	2	444.2506103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATADLALGR_	ENSG00000172037|ENST00000305544|LAMB2;ENST00000469665.1_1_3:49160056-49160527:-|nuORF	185.54966270084765	0.0007389233275946833	6				NaN	NaN	0	NaN	6990	3206	10197
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10199	28.225	NaN	71227	30	0	8579.7	0.106			+	51062	YLKMYGDVM	9	95	576.2586166887144	1150.5026804442286	2	576.2595825195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Oxidation (M)	_YLKM(Oxidation (M))YGDVM(Oxidation (M))_	REV__ENSG00000115593|ENST00000419482|SMYD1	90.77665401227738	0.06267569666681755	6				NaN	NaN	0	NaN	6991	3206	10197
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10200	28.227	NaN	82725	30	0	9300.1	0.106			+	16200	HEAVNGKRR	9	102	533.7974942071985	1065.580435481197	2	533.7984619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HEAVNGKRR_	REV__ENST00000546741.2_3_12:33047478-33047565:-|nuORF	68.78682469695295	0.14603441672067394	6				NaN	NaN	0	NaN	6992	3206	10197
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10201	28.229	NaN	19129	30	0	1768.6	0.106				-1	RVFVVGVGMTK	11	80	403.5651714421226	1207.6736849265678	3	403.5654602050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_RVFVVGVGM(Oxidation (M))TK_	ENSG00000116171|ENST00000371514|SCP2;ENST00000528311.5_1_1:53392996-53413692:+|nuORF;nc|ENSG00000116171|P22307-3|SCP2;nc|ENSG00000116171|P22307-7|SCP2;nc|ENSG00000116171|P22307-8|SCP2	38.95959988160937	0.572178899310682	6				NaN	NaN	0	NaN	6993	3206	10197
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10202	28.231	NaN	9747.7	30	0	2422	0.106				-1	 	0	80	357.232367981224	1068.675274543872	3	357.2327575683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6994	3206	10197
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10203	28.233	NaN	13959	30	0	2600.6	0.035	+			27569	MPFKKGAAF	9	78	498.76973349640144	995.5249140596029	2	498.7700500488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MPFKKGAAF_	ENSG00000171747|ENST00000307751|LGALS4	106.41520541750704	0.03265588207292361	6				NaN	NaN	0	NaN	6995	3206	10197
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10204	28.233	NaN	6039.1	30	0	681.78	0.139			+	28469	NFVIGNIIS	9	81	488.7757927995206	NaN	0	488.77655029296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NFVIGNIIS_	REV__ENSG00000163812|ENST00000424952|ZDHHC3;REV__nc|ENSG00000163812|Q9NYG2-2|ZDHHC3;REV__ZDHHC3|p.A104Qfs*17|1|0.22|ENSG00000163812|chr3:44945289-44945289|C/-|frameshift_variant;REV__ZDHHC3|p.F272Lfs*7|1|0.06|ENSG00000163812|chr3:44926773-44926773|A/-|frameshift_variant	58.78195531508484	0.1545138866451181	6				NaN	NaN	0	NaN	6996	3206	10197
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10222	28.271	NaN	162870	30	0	15269	0.164	+			34638	RVQEAVESMVK	11	97	638.3400020824026	1274.6654512316052	2	638.33984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVQEAVESMVK_	ENSG00000035141|ENST00000430566|FAM136A;ENST00000460307.1_1_2:70528513-70529143:-|nuORF;ENST00000498665.1_1_2:70527944-70529143:-|nuORF;nc|ENSG00000035141|Q96C01|FAM136A	152.69292282917763	6.602793133983423E-05	6				NaN	NaN	0	NaN	7011	3209	10221
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10223	28.274	NaN	185740	30	0	20823	0.106	+			34639	RVQEAVESMVK	11	115	425.8949903241978	1274.6631415727934	3	425.8955383300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RVQEAVESMVK_	ENSG00000035141|ENST00000430566|FAM136A;ENST00000460307.1_1_2:70528513-70529143:-|nuORF;ENST00000498665.1_1_2:70527944-70529143:-|nuORF;nc|ENSG00000035141|Q96C01|FAM136A	141.91077491472637	0.00035695405801307794	6				NaN	NaN	0	NaN	7012	3209	10221
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10224	28.276	NaN	31751	30	0	5877	0.106				-1	 	0	87	523.2973350460912	1044.5801171589824	2	523.29833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7013	3209	10221
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10225	28.278	NaN	29898	30	0	7401.9	0.106	+			51323	YSLNFQKAR	9	93	563.8030215888909	1125.5914902445818	2	563.8040771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YSLNFQKAR_	nc|ENSG00000211792|A0A0A6YYC5|TRAV14DV4	45.9519527083369	0.35044536499095585	6				NaN	NaN	0	NaN	7014	3209	10221
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10226	28.28	NaN	15233	30	0	3262.2	0.106	+			41677	SVSAVNLPK	9	78	457.76933873950776	913.5241245458155	2	457.7688293457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVSAVNLPK_	ENSG00000116871|ENST00000474796|MAP7D1;MAP7D1|p.A565Rfs*10|1|0.29|ENSG00000116871|chr1:36178180-36178180|C/-|frameshift_variant;MAP7D1|p.C481Afs*94|2|0.29|ENSG00000116871|chr1:36177929-36177929|C/-|frameshift_variant;MAP7D1|p.R498Efs*77|2|0.32|ENSG00000116871|chr1:36177980-36177980|C/-|frameshift_variant;nc|ENSG00000116871|Q3KQU3-4|MAP7D1;nc|ENSG00000116871|Q3KQU3|MAP7D1	85.16082228582465	0.07850854922700509	6				NaN	NaN	0	NaN	7015	3209	10221
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10227	28.282	NaN	18939	30	0	1600.4	0.106	+			23789	LCLSKWVS	8	76	468.25478608553146	934.495019237863	2	468.2552490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LCLSKWVS_	ENST00000447399.6_1_11:9771951-9772089:+|nuORF	45.9519527083369	0.6193794311207887	6				NaN	NaN	0	NaN	7016	3209	10221
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10228	28.283	NaN	21898	30	0	6377.8	0.035				-1	 	0	84	493.7788401602103	985.5431273872206	2	493.7794494628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7017	3209	10221
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10246	28.321	NaN	109810	30	0	60363	0.194				-1	 	0	82	492.26083130935416	982.5071096855083	2	492.2612609863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7032	3212	10245
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10247	28.324	NaN	124990	30	0	84117	0.106				-1	 	0	87	432.221811895198	1293.643606285794	3	432.2222595214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7033	3212	10245
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10248	28.326	NaN	68314	30	0	16425	0.106			+	23834	LCVLDLQTCI	10	95	560.7901007492243	1119.5656485652485	2	560.7911987304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LCVLDLQTCI_	REV__ENST00000318709.8_1_7:32624999-32625218:+|nuORF	60.11826168202944	0.36476464221954025	6				NaN	NaN	0	NaN	7034	3212	10245
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10249	28.328	NaN	13818	30	0	1635.2	0.106			+	-1	AVAFALCAL	9	83	468.25478608553146	934.495019237863	2	468.2552185058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_AVAFALC(Carbamidomethyl (C))AL_	REV__ENSG00000163406|ENST00000489711|SLC15A2;REV__nc|ENSG00000163406|Q16348-2|SLC15A2;REV__SLC15A2|p.N718Tfs*2|1|0.11|ENSG00000163406|chr3:121940965-121940965|G/-|frameshift_variant	39.021493756699265	0.43173687394350213	6				NaN	NaN	0	NaN	7035	3212	10245
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10250	28.33	NaN	19312	30	0	2672.1	0.106			+	17603	IEGEKTVTV	9	88	488.271317415552	NaN	0	488.27142333984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IEGEKTVTV_	REV__CLSTN1|p.N221Tfs*5|2|0.36|ENSG00000171603|chr1:9749901-9749901|T/-|frameshift_variant;REV__ENSG00000171603|ENST00000377298|CLSTN1	72.87924865735499	0.09578366712754152	6				NaN	NaN	0	NaN	7036	3212	10245
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10251	28.332	NaN	21370	30	0	1953.5	0.106			+	9468	EKQCKCAEKP	10	88	582.2820986381477	1162.5496443430952	2	582.2828369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EKQCKCAEKP_	REV__ATP2C2|p.E482Rfs*13|1|0.43|ENSG00000064270|chr16:84446364-84446364|A/-|frameshift_variant;REV__ATP2C2|p.Y727Tfs*11|2|0.26|ENSG00000064270|chr16:84459146-84459146|T/-|frameshift_variant;REV__ENSG00000064270|ENST00000262429|ATP2C2;REV__nc|ENSG00000064270|O75185-3|ATP2C2	85.86182877749512	0.1547657473298402	6				NaN	NaN	0	NaN	7037	3212	10245
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10252	28.333	NaN	20952	30	0	8011.9	0.035	+			28948	NRYISDTF	8	85	508.2452595636971	1014.4759661941943	2	508.2458190917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NRYISDTF_	ENSG00000162571|ENST00000379289|TTLL10;nc|ENSG00000162571|Q6ZVT0-2|TTLL10;nc|ENSG00000162571|Q6ZVT0-3|TTLL10	47.91560031466742	0.6071945918984287	6				NaN	NaN	0	NaN	7038	3212	10245
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10270	28.369	NaN	57427	30	0	14968	0.214	+			44416	TSLPSAICK	9	97	488.7591344135484	975.5037158938968	2	488.75994873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_TSLPSAIC(Carbamidomethyl (C))K_	ENSG00000177731|ENST00000327031|FLII;ENST00000578101.5_1_17:18148454-18160363:-|nuORF;FLII|p.K628Rfs*27|1|0.37|ENSG00000177731|chr17:18249178-18249178|T/-|frameshift_variant;FLII|p.S470Afs*32|1|0.36|ENSG00000177731|chr17:18251454-18251454|G/-|frameshift_variant;nc|ENSG00000177731|Q13045-2|FLII;nc|ENSG00000177731|Q13045-3|FLII	124.08010499294276	0.018729767491916592	6				NaN	NaN	0	NaN	7053	3215	10269
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10271	28.372	NaN	51899	30	0	3590	0.106	+			11027	FEKKYVATL	9	97	549.8128629003312	1097.6111728674623	2	549.8135375976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FEKKYVATL_	ENSG00000132341|ENST00000543796|RAN	120.27252224102466	0.02103478360410217	6				NaN	NaN	0	NaN	7054	3215	10269
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10272	28.374	NaN	21560	30	0	14450	0.106				-1	 	0	63	440.72025979214266	879.4259666510853	2	440.7206726074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7055	3215	10269
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10273	28.376	NaN	7789.7	30	0	1276.9	0.106			+	-1	CTMAARVQDKM	11	81	663.8011791528265	1325.587805372453	2	663.7994995117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_C(Carbamidomethyl (C))TMAARVQDKM(Oxidation (M))_	REV__ENSG00000072121|ENST00000347230|ZFYVE26;REV__ENST00000394455.6_1_14:68196461-68236507:-|nuORF;REV__nc|ENSG00000072121|Q68DK2-2|ZFYVE26;REV__nc|ENSG00000072121|Q68DK2-3|ZFYVE26;REV__nc|ENSG00000072121|Q68DK2-5|ZFYVE26;REV__ZFYVE26|p.D2439Efs*31|1|0.04|ENSG00000072121|chr14:67752398-67752399|-/T|frameshift_variant;REV__ZFYVE26|p.D2513Mfs*3|1|0.29|ENSG00000072121|chr14:67748519-67748519|C/-|frameshift_variant	42.86426827375447	0.5187511139693657	6				NaN	NaN	0	NaN	7056	3215	10269
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10274	28.378	NaN	5137	30	0	2003	0.106				-1	MKASRKML	8	36	332.84876261499073	995.5244584451723	3	332.8492736816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Oxidation (M)	_M(Oxidation (M))KASRKM(Oxidation (M))L_	ENSG00000159495|ENST00000452443|TGM7	16.473147378115264	0.7942579620968672	6				NaN	NaN	0	NaN	7057	3215	10269
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10275	28.38	NaN	11782	30	0	2014.6	0.035	+			49685	VYKGEEATF	9	82	522.2559214550004	1042.4972899768006	2	522.2559814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VYKGEEATF_	ENSG00000075420|ENST00000415807|FNDC3B	80.45461616416974	0.09558281504443908	6				NaN	NaN	0	NaN	7058	3215	10269
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10276	28.38	NaN	8008.6	30	0	527.48	0.142			+	35733	SDQKESKQKL	10	83	595.8217179811978	1189.6288830291955	2	595.8228759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SDQKESKQKL_	REV__nc|ENSG00000181026|Q8WTP8-2|AEN	65.15724298150197	0.31893571707528906	6				NaN	NaN	0	NaN	7059	3215	10269
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10294	28.42	NaN	46229	30	0	8264.4	0.214				-1	 	0	79	486.742306199854	971.470059466508	2	486.7427062988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7074	3218	10293
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10295	28.423	NaN	22143	30	0	6187.8	0.106	+			42389	TAIREAQTF	9	82	518.7737463182406	1035.532939703281	2	518.77490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAIREAQTF_	BAZ1B|p.A1298Cfs*10|1|0.16|ENSG00000009954|chr7:73444083-73444084|-/G|frameshift_variant;ENSG00000009954|ENST00000339594|BAZ1B;nc|ENSG00000009954|Q9UIG0-2|BAZ1B	91.26522074875469	0.06129826844580791	6				NaN	NaN	0	NaN	7075	3218	10293
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10296	28.425	NaN	55149	30	0	9624	0.106	+			38805	SSMTAVLQK	9	98	482.7594944617759	963.5044359903518	2	482.7600402832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSMTAVLQK_	ENST00000470658.1_1_21:44293721-44296875:-|nuORF	145.15565482312357	0.00806134135205793	6				NaN	NaN	0	NaN	7076	3218	10293
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10297	28.427	NaN	17708	30	0	3809.2	0.106	+			25457	LPQHQVPAY	9	74	526.7793151248941	1051.544077316588	2	526.7799682617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LPQHQVPAY_	ENSG00000130522|ENST00000252818|JUND	85.35947970620816	0.07794846947388434	6				NaN	NaN	0	NaN	7077	3218	10293
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10298	28.429	NaN	16980	30	0	1551	0.106	+			10397	EVEAWLGEQ	9	85	530.7487445268631	1059.4829361205261	2	530.7496948242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EVEAWLGEQ_	ENSG00000160460|ENST00000598249|SPTBN4;ENST00000596900.5_1_19:41036434-41060733:+|nuORF;nc|ENSG00000160460|Q9H254-3|SPTBN4;nc|ENSG00000160460|Q9H254-4|SPTBN4;nc|ENSG00000160460|Q9H254-5|SPTBN4	79.71258880314673	0.09879134589249085	6				NaN	NaN	0	NaN	7078	3218	10293
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10299	28.431	NaN	14492	30	0	9135.2	0.039				-1	DSQELLLFLM	10	59	408.8775008855072	1223.6106732567216	3	408.8778381347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_DSQELLLFLM(Oxidation (M))_	ENSG00000138592|ENST00000307179|USP8;ENST00000419830.2_1_15:50786258-50791282:+|nuORF;nc|ENSG00000138592|P40818-2|USP8;USP8|p.K997Rfs*2|1|0.11|ENSG00000138592|chr15:50497178-50497178|A/-|frameshift_variant	21.68575002086885	0.7027366847906487	6				NaN	NaN	0	NaN	7079	3218	10293
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10300	28.431	NaN	11348	30	0	2663.1	0.142				-1	 	0	83	379.5654612129348	1135.6745542390045	3	379.56561279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7080	3218	10293
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10318	28.471	NaN	69465	30	0	7471.5	0.214	+			33081	REKLQEEML	9	96	588.3073970710833	1174.6002412089665	2	588.30810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_REKLQEEML_	ENSG00000026025|ENST00000544301|VIM;ENST00000485947.1_1_10:17271421-17272784:+|nuORF	123.11161354013207	0.019316068184164998	6				NaN	NaN	0	NaN	7095	3221	10317
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10319	28.474	NaN	66289	30	0	8807.4	0.106				-1	 	0	99	453.74200323497575	905.4694535367515	2	453.74224853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7096	3221	10317
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10320	28.477	NaN	10177	30	0	1982.7	0.106	+			36437	SEVAMHSL	8	77	437.20986257729203	872.4051722213841	2	437.2100524902344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEVAMHSL_	ENSG00000100290|ENST00000216115|BIK	90.77665401227738	0.27511901818546464	6				NaN	NaN	0	NaN	7097	3221	10317
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10321	28.478	NaN	10018	30	0	1786.3	0.106				-1	EGCRYNVMHV	10	67	427.5223969093237	1279.545361328171	3	427.5229797363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_EGC(Carbamidomethyl (C))RYNVM(Oxidation (M))HV_	ENSG00000176915|ENST00000357997|ANKLE2;nc|ENSG00000176915|Q86XL3-2|ANKLE2	26.063383197487333	0.6669871633831898	6				NaN	NaN	0	NaN	7098	3221	10317
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10322	28.48	NaN	12001	30	0	1078.5	0.106			+	33320	RGSFLNRRKR	10	82	430.5939030346028	1288.7598797040084	3	430.5942687988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RGSFLNRRKR_	REV__ENST00000332290.3_1_6:170103039-170103093:+|nuORF	35.17822180527639	0.5925517082438457	6				NaN	NaN	0	NaN	7099	3221	10317
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10323	28.482	NaN	6128.4	30	0	536.3	0.035			+	8958	EFDIASKVN	9	88	511.76312463598003	1021.5116963387601	2	512.76904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EFDIASKVN_	REV__SRP54|p.L62F|1|0.11|ENSG00000100883|chr14:35000949-35000949|C/T|missense_variant	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	7100	3221	10317
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10324	28.483	NaN	11803	30	0	5649.7	0.144			+	13446	GLIFALLAWA	10	55	358.8840413393127	1073.6302946181381	3	358.8853454589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GLIFALLAWA_	REV__ENSG00000146453|ENST00000392167|PNLDC1;REV__nc|ENSG00000146453|Q8NA58|PNLDC1	24.519189625965996	0.6795976720565101	6				NaN	NaN	0	NaN	7101	3221	10317
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10342	28.52	NaN	386920	30	0	84652	0.137	+			3871	ATANQIILK	9	91	486.29727803000713	970.5800031268143	2	486.29779052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATANQIILK_	nc|ENSG00000139793|Q5VZF2-2|MBNL2	185.54966270084765	0.0007389233275946833	6				NaN	NaN	0	NaN	7116	3224	10341
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10343	28.523	NaN	17532	30	0	1482.9	0.106	+			43042	TELAMRQSV	9	88	517.7687913378867	NaN	0	517.7689819335938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TELAMRQSV_	CON__P05784;ENSG00000111057|ENST00000388835|KRT18;ENST00000396959.2_1_3:12829511-12830132:-|nuORF;ENST00000424695.1_1_1:238654935-238655424:+|nuORF;ENST00000427733.1_1_13:90882929-90883235:+|nuORF;ENST00000549078.5_1_12:53344429-53346127:+|nuORF	146.78539889680295	0.0014292327921901949	6				NaN	NaN	0	NaN	7117	3224	10341
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10344	28.525	NaN	11889	30	0	947.3	0.106	+			8423	EAQPIVTKY	9	77	524.787030858755	1047.5595087843099	2	524.787841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EAQPIVTKY_	ENSG00000214753|ENST00000301785|HNRNPUL2	176.44474024533739	0.0016668318535579616	6				NaN	NaN	0	NaN	7118	3224	10341
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10345	28.526	NaN	15111	30	0	4178.3	0.106	+			23307	KYPNMFKKI	9	73	390.2228155423582	1167.6466172272746	3	390.2230529785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KYPNMFKKI_	ENSG00000158467|ENST00000325006|AHCYL2;ENST00000492628.1_1_7:129040195-129045055:+|nuORF;nc|ENSG00000158467|Q96HN2-2|AHCYL2;nc|ENSG00000158467|Q96HN2-3|AHCYL2;nc|ENSG00000158467|Q96HN2-4|AHCYL2;TNPO3-AHCYL2|1|fusion	71.87747018426188	0.13267044672804276	6				NaN	NaN	0	NaN	7119	3224	10341
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10346	28.528	NaN	21956	30	0	2760.8	0.106	+			47302	VNQENLGLLV	10	89	549.8128629003312	1097.6111728674623	2	550.3165893554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VNQENLGLLV_	ENST00000357250.10_1_6:70952402-70964697:-|nuORF	49.44154591367651	0.46214596422418036	6				NaN	NaN	0	NaN	7120	3224	10341
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10347	28.53	NaN	4554.3	30	0	815.06	0.106				-1	 	0	54	351.2322852982409	700.4500176632819	2	351.2328186035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7121	3224	10341
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10348	28.532	NaN	26955	30	0	5320.2	0.036			+	26445	LTGQAKELRG	10	103	536.8082186432533	1071.6018843533066	2	536.8096923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LTGQAKELRG_	REV__ENSG00000106333|ENST00000223061|PCOLCE;REV__ENST00000468214.1_1_7:100202094-100202865:+|nuORF;REV__ENST00000487172.1_1_7:100201659-100202865:+|nuORF;REV__PCOLCE|p.K299Sfs*41|1|0.31|ENSG00000106333|chr7:100606579-100606579|C/-|frameshift_variant	31.529811441608018	0.6223461015008678	6				NaN	NaN	0	NaN	7122	3224	10341
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10366	28.567	NaN	77097	30	0	15783	0.214	+			49211	VVMVNQGLTK	10	88	544.8090983168921	1087.6036437005841	2	544.8107299804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVMVNQGLTK_	ENSG00000134057|ENST00000256442|CCNB1	167.93327368760816	0.004342583126626421	6				NaN	NaN	0	NaN	7137	3227	10365
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10367	28.571	NaN	33381	30	0	11165	0.106	+			7303	DASGAKLDY	9	89	470.22425500958616	938.4339570859723	2	470.22418212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DASGAKLDY_	BZW1|p.N285Tfs*11|2|0.26|ENSG00000082153|chr2:200818782-200818782|A/-|frameshift_variant;BZW1|p.N286*|1|0.04|ENSG00000082153|chr2:200818790-200818791|-/T|frameshift_variant;BZW1|p.S325Rfs*19|1|0.04|ENSG00000082153|chr2:200819989-200819990|-/ACAATATAGAA|frameshift_variant;ENSG00000082153|ENST00000409600|BZW1;ENST00000464483.1_1_2:201677931-201680272:+|nuORF;nc|ENSG00000082153|Q7L1Q6-2|BZW1;nc|ENSG00000082153|Q7L1Q6-3|BZW1;nc|ENSG00000082153|Q7L1Q6-4|BZW1	143.37361013837676	0.008897369944672323	6				NaN	NaN	0	NaN	7138	3227	10365
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10368	28.573	NaN	5761.9	30	0	830.84	0.106	+			2067	ALANVSIEK	9	68	472.7736695022422	943.5327860712845	2	472.7738952636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ALANVSIEK_	ENSG00000129083|ENST00000439561|COPB1	53.08895987439943	0.27122541748218487	6				NaN	NaN	0	NaN	7139	3227	10365
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10369	28.575	NaN	9608.3	30	0	726.87	0.106			+	45418	TVVRYGVDP	9	83	503.27378309442673	1004.5330132556535	2	502.77587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TVVRYGVDP_	REV__ENSG00000166268|ENST00000552032|MYRFL	69.6276240434122	0.14239879520340665	6				NaN	NaN	0	NaN	7140	3227	10365
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10370	28.577	NaN	7852.4	30	0	394.9	0.106	+			17290	IADAAYKAM	9	82	477.24141729072494	NaN	0	477.2416076660156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IADAAYKAM_	ENSG00000176658|ENST00000318217|MYO1D	98.62937762414208	0.024200618960070384	6				NaN	NaN	0	NaN	7141	3227	10365
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10371	28.578	NaN	8157.3	30	0	1261.1	0.035	+			33755	RPRPPRAQ	8	80	489.2919369666591	976.5693210001182	2	489.2925720214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RPRPPRAQ_	ENST00000390006.8_1_17:80416158-80417872:+|nuORF;ENST00000579198.5_3_17:80416158-80417872:+|nuORF;REV__ENSG00000084693|ENST00000360131|AGBL5	37.15910966729921	0.6739408393984688	6				NaN	NaN	0	NaN	7142	3227	10365
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10372	28.579	NaN	5659.8	30	0	1447.5	0.139	+			3555	ASTLSLVNK	9	70	466.7736153146395	931.5326776960791	2	466.7738037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASTLSLVNK_	ENSG00000159140|ENST00000356577|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-4|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-6|SON;nc|ENSG00000159140|P18583-7|SON;nc|ENSG00000159140|P18583-9|SON	75.04331003522576	0.118981335847003	6				NaN	NaN	0	NaN	7143	3227	10365
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10390	28.618	NaN	97106	30	0	18117	0.184	+			5704	AVFDGAQVTSK	11	88	561.7926596686256	1121.570766404051	2	561.7933959960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVFDGAQVTSK_	ENSG00000175274|ENST00000525680|TP53I11	201.61192446435922	1.963053260341711E-08	6				NaN	NaN	0	NaN	7158	3230	10389
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10391	28.621	NaN	33645	30	0	5221.6	0.106			+	7050	CSYQGALSR	9	81	492.73150642311515	983.4484599130303	2	492.73199462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_CSYQGALSR_	REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-13|TTN;REV__nc|ENSG00000155657|Q8WZ42-2|TTN;REV__nc|ENSG00000155657|Q8WZ42-4|TTN;REV__nc|ENSG00000155657|Q8WZ42-5|TTN;REV__nc|ENSG00000155657|Q8WZ42-7|TTN;REV__nc|ENSG00000155657|Q8WZ42-8|TTN;REV__nc|ENSG00000155657|Q8WZ42|TTN;REV__TTN|p.A12650Gfs*4|1|0.4|ENSG00000155657|chr2:178633489-178633490|-/T|frameshift_variant;REV__TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;REV__TTN|p.D20259Rfs*40|1|0.44|ENSG00000155657|chr2:178583105-178583106|-/T|frameshift_variant;REV__TTN|p.D21555Ifs*6|1|0.33|ENSG00000155657|chr2:178576659-178576659|G/-|frameshift_variant;REV__TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;REV__TTN|p.E15132Sfs*22|1|0.27|ENSG00000155657|chr2:178612094-178612094|C/-|frameshift_variant;REV__TTN|p.E20392Dfs*6|1|0.04|ENSG00000155657|chr2:178582357-178582358|-/TTTAAAATTA|frameshift_variant;REV__TTN|p.E20392Kfs*4|1|0.02|ENSG00000155657|chr2:178582359-178582360|-/TTTT|frameshift_variant;REV__TTN|p.E9224Gfs*8|1|0.04|ENSG00000155657|chr2:178709697-178709698|-/TCTTATGATATCTTGAC|frameshift_variant;REV__TTN|p.F18705Lfs*8|1|0.37|ENSG00000155657|chr2:178590687-178590687|A/-|frameshift_variant;REV__TTN|p.G12742Vfs*2|1|0.05|ENSG00000155657|chr2:178632983-178632983|C/-|frameshift_variant;REV__TTN|p.G14712Dfs*11|1|0.37|ENSG00000155657|chr2:178614341-178614341|G/-|frameshift_variant;REV__TTN|p.G19920Afs*12|1|0.42|ENSG00000155657|chr2:178584961-178584961|G/-|frameshift_variant;REV__TTN|p.G22029Efs*22|2|0.13|ENSG00000155657|chr2:178575125-178575125|T/-|frameshift_variant;REV__TTN|p.I10495Nfs*4|1|0.37|ENSG00000155657|chr2:178685288-178685289|-/T|frameshift_variant;REV__TTN|p.I24998Nfs*2|1|0.35|ENSG00000155657|chr2:178566216-178566217|-/T|frameshift_variant;REV__TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;REV__TTN|p.I9225Cfs*34|1|0.06|ENSG00000155657|chr2:178709695-178709696|-/ATATCCATGAGCA|frameshift_variant;REV__TTN|p.K10923Rfs*104|2|0.23|ENSG00000155657|chr2:178679362-178679362|T/-|frameshift_variant;REV__TTN|p.K11381Nfs*25|1|0.07|ENSG00000155657|chr2:178671133-178671133|T/-|frameshift_variant;REV__TTN|p.K11556Sfs*15|1|0.39|ENSG00000155657|chr2:178652287-178652287|T/-|frameshift_variant;REV__TTN|p.K14271Qfs*5|1|0.02|ENSG00000155657|chr2:178617351-178617352|-/G|frameshift_variant;REV__TTN|p.K26626Nfs*34|1|0.34|ENSG00000155657|chr2:178561331-178561331|T/-|frameshift_variant;REV__TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;REV__TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;REV__TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant;REV__TTN|p.N13487Tfs*49|1|0.34|ENSG00000155657|chr2:178621335-178621335|T/-|frameshift_variant;REV__TTN|p.N15496Ifs*16|1|0.09|ENSG00000155657|chr2:178610116-178610116|T/-|frameshift_variant;REV__TTN|p.P16126Rfs*3|1|0.25|ENSG00000155657|chr2:178607301-178607302|TG/-|frameshift_variant;REV__TTN|p.P22810Hfs*10|1|0.03|ENSG00000155657|chr2:178572780-178572781|-/AAAT|frameshift_variant;REV__TTN|p.V10632Yfs*16|1|0.16|ENSG00000155657|chr2:178683254-178683254|T/-|frameshift_variant;REV__TTN|p.V11008Sfs*13|1|0.33|ENSG00000155657|chr2:178678146-178678147|-/T|frameshift_variant;REV__TTN|p.V11345Ffs*4|1|0.4|ENSG00000155657|chr2:178672044-178672044|T/-|frameshift_variant;REV__TTN|p.V13823*|1|0.28|ENSG00000155657|chr2:178620027-178620027|C/-|frameshift_variant;REV__TTN|p.V22573Cfs*4|2|0.31|ENSG00000155657|chr2:178573492-178573492|C/-|frameshift_variant;REV__TTN|p.V27442Cfs*4|1|0.05|ENSG00000155657|chr2:178558107-178558108|-/A|frameshift_variant	139.97047562133406	0.010493916756945389	6				NaN	NaN	0	NaN	7159	3230	10389
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10392	28.623	NaN	16814	30	0	4208.8	0.106	+			16621	HGTVVALRY	9	85	508.28706091689116	1014.5595689005823	2	508.2874755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HGTVVALRY_	ENSG00000110013|ENST00000263593|SIAE;nc|ENSG00000110013|Q9HAT2-2|SIAE	104.74654710444128	0.034358562718640136	6				NaN	NaN	0	NaN	7160	3230	10389
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10393	28.625	NaN	9100.3	30	0	1409.1	0.106	+			27570	MPFKKGAAF	9	75	498.76973349640144	995.5249140596029	2	498.7708435058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MPFKKGAAF_	ENSG00000171747|ENST00000307751|LGALS4	63.30626980617807	0.18605348971131092	6				NaN	NaN	0	NaN	7161	3230	10389
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10394	28.627	NaN	22462	30	0	2428.4	0.106	+			27972	MVLPKQAPM	9	88	515.7735306643262	1029.5325083954524	2	515.7743530273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_MVLPKQAPM(Oxidation (M))_	ENST00000393784.7_1_5:172378203-172378416:+|nuORF	68.484700416344	0.1473408039581241	6				NaN	NaN	0	NaN	7162	3230	10389
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10395	28.629	NaN	9969.2	30	0	3114.5	0.106	+			47895	VSLKEAQKVN	10	75	372.5520419499576	NaN	0	372.55206298828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VSLKEAQKVN_	ENSG00000165115|ENST00000297814|KIF27;KIF27|p.K1223Tfs*2|1|0.11|ENSG00000165115|chr9:83842289-83842290|TT/-|frameshift_variant;KIF27|p.M726Nfs*7|1|0.18|ENSG00000165115|chr9:83887103-83887104|-/T|frameshift_variant;nc|ENSG00000165115|Q86VH2-2|KIF27;nc|ENSG00000165115|Q86VH2-3|KIF27	40.05817265558897	0.3684561582319974	6				NaN	NaN	0	NaN	7163	3230	10389
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10396	28.631	NaN	7841.2	30	0	677.09	0.032			+	26677	LVGLVGFC	8	70	404.2269134732743	806.4392740133486	2	404.22711181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LVGLVGFC_	REV__ENSG00000017483|ENST00000620913|SLC38A5;REV__nc|ENSG00000017483|Q8WUX1-2|SLC38A5	54.89457262308372	0.5523244765420926	6				NaN	NaN	0	NaN	7164	3230	10389
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10414	28.668	NaN	117370	30	0	29225	0.214				-1	 	0	97	458.7762663145988	915.5379796959976	2	458.776611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7179	3233	10413
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10415	28.672	NaN	30295	30	0	4750.9	0.106	+			49554	VYASDRATF	9	91	515.2524577780018	1028.4903626228036	2	515.2539672851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYASDRATF_	ENSG00000198721|ENST00000380118|ECI2;ENST00000380120.6_1_6:4116110-4130812:-|nuORF;ENST00000464057.5_1_6:4116110-4125894:-|nuORF;ENST00000464583.5_1_6:4119386-4125894:-|nuORF;ENST00000496241.6_1_6:4116110-4130478:-|nuORF;nc|ENSG00000198721|O75521-2|ECI2	63.53385203322761	0.18415635464017938	6				NaN	NaN	0	NaN	7180	3233	10413
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10416	28.674	NaN	31003	30	0	14991	0.106	+			46825	VIDQDMATRLK	11	89	430.56694962237435	1288.679019467323	3	430.5674133300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VIDQDMATRLK_	ENSG00000096696|ENST00000379802|DSP;nc|ENSG00000096696|P15924-2|DSP;nc|ENSG00000096696|P15924-3|DSP	60.1669710687717	0.32196467475348695	6				NaN	NaN	0	NaN	7181	3233	10413
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10417	28.676	NaN	15124	30	0	1832.4	0.106	+			479	AAWVTALNE	9	92	487.7506724622989	973.4867919913978	2	487.75054931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AAWVTALNE_	ENSG00000157617|ENST00000380486|C2CD2;ENST00000478372.1_1_21:43373107-43373571:-|nuORF;nc|ENSG00000157617|Q9Y426-3|C2CD2	76.7741389293348	0.11149722112137898	6				NaN	NaN	0	NaN	7182	3233	10413
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10418	28.677	NaN	6167.7	30	0	3745.1	0.106				-1	 	0	48	336.503548499573	1006.4888160989191	3	336.504150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7183	3233	10413
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10419	28.679	NaN	9413.9	30	0	4037.8	0.036	+			16779	HPAELYRAL	9	76	535.292908926473	1068.571264919746	2	535.2935180664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HPAELYRAL_	ENSG00000161835|ENST00000293662|TAMALIN	56.43379154798735	0.2433427591689151	6				NaN	NaN	0	NaN	7184	3233	10413
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10420	28.68	NaN	5876.7	30	0	890.57	0.139	+			48840	VVAVGRAL	8	72	392.7554423548895	783.496331776579	2	392.7555236816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VVAVGRAL_	ENSG00000167986|ENST00000301764|DDB1;ENST00000414411.3_1_11:61081295-61081943:-|nuORF	52.29916861842294	0.578018602984656	6				NaN	NaN	0	NaN	7185	3233	10413
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10438	28.718	NaN	19973	30	0	1570.8	0.214			+	33394	RIATVWCT	8	95	503.7612862483548	1005.5080195635096	2	503.762451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_RIATVWC(Carbamidomethyl (C))T_	REV__ENSG00000115290|ENST00000263915|GRB14;REV__GRB14|p.E402Rfs*18|1|0.29|ENSG00000115290|chr2:164497391-164497392|-/T|frameshift_variant;REV__nc|ENSG00000115290|Q14449-2|GRB14	60.97194046774394	0.49215940876911696	6				NaN	NaN	0	NaN	7200	3236	10437
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10439	28.721	NaN	12632	30	0	2769.5	0.106	+			45980	VATEKAVEL	9	77	480.2734688944734	958.5323848557468	2	480.27410888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VATEKAVEL_	ENSG00000163931|ENST00000462138|TKT;ENST00000460243.1_1_3:53262881-53263452:-|nuORF;ENST00000460343.5_1_3:53261754-53265639:-|nuORF;ENST00000461139.5_1_3:53259774-53265639:-|nuORF;ENST00000469678.1_1_3:53259917-53265542:-|nuORF;nc|ENSG00000163931|P29401-2|TKT	82.7504851949679	0.08565546331141553	6				NaN	NaN	0	NaN	7201	3236	10437
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10440	28.723	NaN	18407	30	0	3129.1	0.106			+	18223	INKYQATGPL	10	88	368.8719427727635	NaN	0	368.8742980957031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_INKYQATGPL_	REV__FBN2|p.K2435N|1|0.28|ENSG00000138829|chr5:128278675-128278675|C/A|missense_variant	61.691277971877994	0.22046696034287383	6				NaN	NaN	0	NaN	7202	3236	10437
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10441	28.725	NaN	19135	30	0	7229.8	0.106	+			12982	GETQKTISL	9	85	488.7687648478939	975.5229767625879	2	488.76910400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GETQKTISL_	ENSG00000112249|ENST00000369162|ASCC3;ENST00000468245.2_1_6:101296020-101315873:-|nuORF;nc|ENSG00000112249|Q8N3C0-4|ASCC3	106.68306549817024	0.032382560583716295	6				NaN	NaN	0	NaN	7203	3236	10437
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10442	28.727	NaN	7914.7	30	0	903.67	0.106	+			3226	ASLADIMAK	9	64	468.2468356940676	NaN	0	468.2471008300781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_ASLADIM(Oxidation (M))AK_	ENSG00000114391|ENST00000394077|RPL24;ENST00000446071.1_1_9:72832122-72832404:+|nuORF	70.8162118820467	0.10318768208603292	6				NaN	NaN	0	NaN	7204	3236	10437
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10443	28.729	NaN	17079	30	0	1582.7	0.038	+			33696	RPDEKAIMTY	10	91	612.3075339796982	1222.6005150261963	2	612.308837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RPDEKAIMTY_	ENSG00000072110|ENST00000394419|ACTN1;ENSG00000130402|ENST00000252699|ACTN4;ENST00000554508.5_1_14:69367621-69387744:-|nuORF;ENST00000588618.5_1_19:39138385-39212431:+|nuORF;nc|ENSG00000072110|P12814-2|ACTN1;nc|ENSG00000072110|P12814-4|ACTN1;nc|ENSG00000072110|P12814|ACTN1	145.46060221211434	0.009301538339246195	6				NaN	NaN	0	NaN	7205	3236	10437
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10444	28.729	NaN	10686	30	0	746.24	0.141			+	8338	EAKSFEKL	8	79	476.26090053854153	950.5072481438831	2	476.7643127441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EAKSFEKL_	REV__ENSG00000159339|ENST00000375448|PADI4	42.396135135203025	0.6414440140393314	6				NaN	NaN	0	NaN	7206	3236	10437
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10462	28.769	NaN	7100.2	30	0	2217.1	0.213	+			31004	QESEARIQQL	10	71	601.3115123659896	1200.6084717987792	2	601.31298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QESEARIQQL_	ENSG00000100242|ENST00000689035|SUN2;ENST00000469086.5_1_22:39136824-39138467:-|nuORF;ENST00000477262.5_1_22:39135390-39138407:-|nuORF;nc|ENSG00000100242|Q9UH99-2|SUN2;nc|ENSG00000100242|Q9UH99-3|SUN2	129.42129120953632	0.014023551377083414	6				NaN	NaN	0	NaN	7221	3239	10461
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10463	28.772	NaN	9910.9	30	0	834.02	0.106	+			25320	LPAREATQF	9	78	516.7769348920486	1031.5393168508972	2	516.777587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LPAREATQF_	ENSG00000183087|ENST00000327773|GAS6;ENST00000476291.1_1_13:114550749-114566917:-|nuORF;GAS6|p.G150Afs*49|1|0.17|ENSG00000183087|chr13:113839745-113839745|C/-|frameshift_variant;GAS6|p.N106Kfs*13|1|0.39|ENSG00000183087|chr13:113846552-113846553|-/T|frameshift_variant;GAS6|p.R151Pfs*27|1|0.41|ENSG00000183087|chr13:113839744-113839745|-/C|frameshift_variant;nc|ENSG00000183087|Q14393-1|GAS6	65.46538089061403	0.16805504838372562	6				NaN	NaN	0	NaN	7222	3239	10461
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10464	28.774	NaN	7857.2	30	0	965.69	0.106	+			28196	NASKGIYAM	9	80	477.7405600951677	953.4665672571355	2	477.73944091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NASKGIYAM_	ENSG00000142945|ENST00000372224|KIF2C;nc|ENSG00000142945|Q99661-2|KIF2C	71.87747018426188	0.13267044672804276	6				NaN	NaN	0	NaN	7223	3239	10461
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10465	28.776	NaN	6625.8	30	0	2476	0.106	+			30915	QELEAENRL	9	78	551.2797141429534	1100.5448753527066	2	551.2809448242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QELEAENRL_	ENST00000487284.2_1_7:101917466-101926379:+|nuORF;ENST00000558836.5_1_7:101575863-101926379:+|nuORF;ENST00000560541.5_1_7:101556607-101926379:+|nuORF;nc|ENSG00000257923|P39880-9|CUX1;nc|ENSG00000257923|Q13948-10|CUX1;nc|ENSG00000257923|Q13948-2|CUX1;nc|ENSG00000257923|Q13948-9|CUX1;nc|ENSG00000257923|Q13948|CUX1	63.53385203322761	0.18415635464017938	6				NaN	NaN	0	NaN	7224	3239	10461
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10466	28.778	NaN	8126.2	30	0	1108.6	0.106			+	24187	LEQATLTL	8	74	444.75542853675074	NaN	0	444.75555419921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LEQATLTL_	REV__ENSG00000198886|ENST00000361381|MT-ND4	69.6276240434122	1.7418937515398478	6				NaN	NaN	0	NaN	7225	3239	10461
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10467	28.78	NaN	6112.3	30	0	523	0.036	+			49212	VVMVNQGLTK	10	87	544.8090983168921	1087.6036437005841	2	545.307861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VVMVNQGLTK_	ENSG00000134057|ENST00000256442|CCNB1	34.08650109265054	0.601467140718965	6				NaN	NaN	0	NaN	7226	3239	10461
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10468	28.78	NaN	7905.7	30	0	715.98	0.141	+			47242	VMNTRTEQT	9	81	540.2603557403116	1078.5061585474232	2	540.7698364257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VMNTRTEQT_	RPS6KC1|p.D354N|1|0.26|ENSG00000136643|chr1:213230512-213230512|G/A|missense_variant	34.172542307311794	0.4838870758800184	6				NaN	NaN	0	NaN	7227	3239	10461
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10486	28.82	NaN	14023	30	0	1893.6	0.214	+			48677	VTSVFQASL	9	83	476.26090053854153	950.5072481438831	2	476.26080322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTSVFQASL_	CEP104|p.C757Vfs*24|1|0.47|ENSG00000116198|chr1:3825853-3825853|A/-|frameshift_variant;ENSG00000116198|ENST00000378230|CEP104;ENST00000494653.5_1_1:3750422-3768971:-|nuORF;nc|ENSG00000116198|O60308-3|CEP104	85.16082228582465	0.07850854922700509	6				NaN	NaN	0	NaN	7242	3242	10485
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10487	28.823	NaN	17273	30	0	1719.2	0.106			+	8179	EAAPVLRSQ	9	84	485.7688185777828	969.5230842223656	2	485.76910400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EAAPVLRSQ_	REV__ENSG00000168502|ENST00000695636|MTCL1;REV__MTCL1|p.G1084Vfs*116|1|0.23|ENSG00000168502|chr18:8798144-8798144|G/-|frameshift_variant;REV__MTCL1|p.G604Afs*38|1|0.5|ENSG00000168502|chr18:8783840-8783840|G/-|frameshift_variant;REV__MTCL1|p.L1858Wfs*5|1|0.26|ENSG00000168502|chr18:8826125-8826125|C/-|frameshift_variant;REV__MTCL1|p.L694Cfs*5|1|0.37|ENSG00000168502|chr18:8784107-8784107|C/-|frameshift_variant;REV__MTCL1|p.P1448Afs*83|1|0.4|ENSG00000168502|chr18:8824888-8824889|-/G|frameshift_variant;REV__MTCL1|p.P1841Lfs*22|1|0.05|ENSG00000168502|chr18:8826071-8826071|C/-|frameshift_variant;REV__MTCL1|p.W1259Efs*14|1|0.09|ENSG00000168502|chr18:8813191-8813192|-/GAGCC|frameshift_variant;REV__nc|ENSG00000168502|Q9Y4B5|MTCL1	49.536043120802724	0.308405419312776	6				NaN	NaN	0	NaN	7243	3242	10485
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10488	28.825	NaN	15583	30	0	1613.2	0.106	+			51179	YPGQPHPAL	9	79	490.2530782981593	978.4916036631187	2	490.2530822753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YPGQPHPAL_	ENSG00000114315|ENST00000232424|HES1	76.84663266511073	0.11118375776443899	6				NaN	NaN	0	NaN	7244	3242	10485
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10489	28.827	NaN	12046	30	0	838.59	0.106	+			18509	ISIHVGQAG	9	74	441.2451592733273	880.4757656134547	2	441.24554443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ISIHVGQAG_	ENSG00000075886|ENST00000321253|TUBA3D;ENSG00000123416|ENST00000336023|TUBA1B;ENSG00000152086|ENST00000312988|TUBA3E;ENSG00000167552|ENST00000301071|TUBA1A;ENSG00000167553|ENST00000301072|TUBA1C;ENSG00000198033|ENST00000400113|TUBA3C;ENST00000430114.1_1_1:202827276-202830656:-|nuORF;ENST00000443294.5_1_1:202822362-202830656:-|nuORF;ENST00000548363.1_1_12:49580068-49582762:-|nuORF;ENST00000550254.1_1_12:49580073-49582762:-|nuORF;ENST00000551324.5_1_12:49523262-49525083:-|nuORF;nc|ENSG00000123416|P68363-2|TUBA1B;nc|ENSG00000198033|P0DPH7-2|TUBA3C;TUBA3C|p.G144Afs*24|1|0.32|ENSG00000198033|chr13:19177554-19177554|A/-|frameshift_variant;TUBA3C|p.T361Rfs*18|1|0.17|ENSG00000198033|chr13:19174136-19174136|G/-|frameshift_variant;TUBA3D|p.G366Efs*13|1|0.17|ENSG00000075886|chr2:131482588-131482588|G/-|frameshift_variant;TUBA3D|p.V328Pfs*54|1|0.45|ENSG00000075886|chr2:131480665-131480666|-/CCCAAAGA|frameshift_variant;TUBA3E|p.Q176Rfs*14|1|0.58|ENSG00000152086|chr2:130194316-130194316|G/-|frameshift_variant	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	7245	3242	10485
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10490	28.829	NaN	12767	30	0	829.48	0.106	+			7784	DPEGSRITY	9	84	519.2482795058743	1036.4820060785485	2	519.2484130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DPEGSRITY_	ENSG00000124596|ENST00000424266|OARD1;ENST00000465893.1_1_6:41037763-41039373:-|nuORF	126.24258497203832	0.01742065577488747	6				NaN	NaN	0	NaN	7246	3242	10485
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10491	28.831	NaN	12756	30	0	1498.1	0.035			+	48353	VTGPFAPNVL	10	87	507.7845402197981	NaN	0	507.7892150878906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTGPFAPNVL_	REV__ENSG00000103310|ENST00000574091|ZP2;REV__nc|ENSG00000103310|Q05996-2|ZP2;REV__ZP2|p.Q43R|1|0.15|ENSG00000103310|chr16:21211330-21211330|T/C|missense_variant	58.22992032128504	0.24873293749302264	6				NaN	NaN	0	NaN	7247	3242	10485
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10492	28.831	NaN	6950.8	30	0	1080.7	0.139	+			8457	EASAIVIQP	9	66	464.2606848891994	926.5068168451988	2	464.26068115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EASAIVIQP_	nc|ENSG00000225830|P0DP91|ERCC6	51.33545320467046	0.2872990594074956	6				NaN	NaN	0	NaN	7248	3242	10485
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10510	28.87	NaN	80439	30	0	24684	0.21	+			39010	SSSGFVAIK	9	78	448.2476393257008	894.4807257182016	2	448.2478942871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSSGFVAIK_	ENSG00000198478|ENST00000369838|SH3BGRL2;SH3BGRL2|p.P55Rfs*41|2|0.28|ENSG00000198478|chr6:79673727-79673727|C/-|frameshift_variant	176.08678752253132	0.0017279326439731339	6				NaN	NaN	0	NaN	7263	3245	10509
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10511	28.873	NaN	43545	30	0	14443	0.106				-1	 	0	89	451.2238732523449	900.4331935714898	2	451.2243347167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7264	3245	10509
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10512	28.876	NaN	23749	30	0	2060.1	0.106	+			50452	YADVGGKQF	9	93	492.74381061929586	NaN	0	492.74298095703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YADVGGKQF_	ENSG00000180879|ENST00000370086|SSR4;ENST00000460616.5_1_X:153061851-153063636:+|nuORF;ENST00000485612.5_1_X:153061851-153063885:+|nuORF	101.25262130126117	0.018912469721856617	6				NaN	NaN	0	NaN	7265	3245	10509
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10513	28.877	NaN	11033	30	0	1373.1	0.106				-1	ATLGMPVAGL	10	86	473.2571522104718	944.4997514877437	2	473.25732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_ATLGM(Oxidation (M))PVAGL_	tr|U7SSJ8|U7SSJ8_FUSNUIntegralmembraneproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01291PE=4SV=1	55.50420428727701	0.4067289358710215	6				NaN	NaN	0	NaN	7266	3245	10509
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10514	28.879	NaN	27949	30	0	5331	0.106			+	9020	EGAVSSPHGFS	11	90	537.7452675326149	1073.4759821320297	2	537.7466430664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EGAVSSPHGFS_	REV__ENSG00000021826|ENST00000233072|CPS1;REV__nc|ENSG00000021826|P31327-3|CPS1	54.776311868738084	0.3700837260462177	6				NaN	NaN	0	NaN	7267	3245	10509
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10515	28.881	NaN	10127	30	0	1200.8	0.034	+			43332	TGASVIRAY	9	74	469.25714494111793	936.4997369490359	2	469.2586975097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TGASVIRAY_	ENSG00000108846|ENST00000285238|ABCC3;ENST00000502426.5_1_17:48736553-48755440:+|nuORF;nc|ENSG00000108846|O15438-2|ABCC3;nc|ENSG00000108846|O15438-4|ABCC3	109.47833844074708	0.029530294723441826	6				NaN	NaN	0	NaN	7268	3245	10509
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10516	28.882	NaN	11131	30	0	2281.5	0.139	+			1307	AESVVPARM	9	88	480.2527462281876	NaN	0	480.2525329589844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AESVVPARM_	ENSG00000167508|ENST00000301012|MVD;ENST00000565149.5_1_16:88718935-88722722:-|nuORF	74.25504064058377	0.09106938647426577	6				NaN	NaN	0	NaN	7269	3245	10509
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10534	28.919	NaN	130970	30	0	29671	0.179	+			40283	STSQTFIYK	9	101	537.7761368616912	1073.5377207901822	2	537.7772216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STSQTFIYK_	ENSG00000004487|ENST00000400181|KDM1A;nc|ENSG00000004487|O60341|KDM1A	204.4243087208965	1.4601778531241419E-05	6				NaN	NaN	0	NaN	7284	3248	10533
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10535	28.922	NaN	53979	30	0	6840.7	0.106				-1	 	0	102	478.7609052394111	955.5072575456222	2	478.7614440917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7285	3248	10533
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10536	28.924	NaN	44752	30	0	9422.1	0.106	+			30363	PVFVLMEQ	8	99	481.7546739840398	961.4947950348796	2	481.7520446777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PVFVLMEQ_	ENSG00000128683|ENST00000358196|GAD1;GAD1|p.W516Gfs*30|1|0.16|ENSG00000128683|chr2:170858824-170858824|T/-|frameshift_variant;nc|ENSG00000128683|Q99259-4|GAD1	55.50420428727701	0.5462892107279674	6				NaN	NaN	0	NaN	7286	3248	10533
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10537	28.926	NaN	19842	30	0	1963.8	0.106			+	-1	KEMKMMRR	8	83	563.2888159095555	1124.563078885911	2	563.2901611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_KEMKMM(Oxidation (M))RR_	REV__GSE1|p.P1093Qfs*45|1|0.45|ENSG00000131149|chr16:85668282-85668282|C/-|frameshift_variant	74.25504064058377	0.37144338840759816	6				NaN	NaN	0	NaN	7287	3248	10533
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10538	28.928	NaN	26289	30	0	6952.9	0.106				-1	 	0	84	402.7366559555502	2812.1056564226515	7	402.8802185058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7288	3248	10533
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10539	28.929	NaN	10182	30	0	1550.9	0.106				-1	 	0	81	456.71353325361275	911.4125135740255	2	456.71417236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7289	3248	10533
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10540	28.931	NaN	6592.7	30	0	671.08	0.036				-1	VPMCEDLEL	9	70	553.2506786680302	1104.4868044028603	2	553.251220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_VPMC(Carbamidomethyl (C))EDLEL_	nc|ENSG00000151067|Q13936-10|CACNA1C;nc|ENSG00000151067|Q13936-16|CACNA1C;nc|ENSG00000151067|Q13936-3|CACNA1C;nc|ENSG00000151067|Q13936-33|CACNA1C;nc|ENSG00000151067|Q13936-34|CACNA1C;nc|ENSG00000151067|Q13936-36|CACNA1C;nc|ENSG00000151067|Q13936-4|CACNA1C;nc|ENSG00000151067|Q13936-5|CACNA1C;nc|ENSG00000151067|Q13936-6|CACNA1C;nc|ENSG00000151067|Q13936-7|CACNA1C;nc|ENSG00000151067|Q13936-8|CACNA1C;nc|ENSG00000151067|Q13936-9|CACNA1C;nc|ENSG00000151067|Q13936|CACNA1C	37.15910966729921	0.4535818937225704	6				NaN	NaN	0	NaN	7290	3248	10533
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10558	28.969	NaN	51602	30	0	12585	0.199	+			40315	STSSVIMMK	9	87	492.24726407003385	982.4799752068677	2	492.2486572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STSSVIMMK_	ENST00000521804.1_1_8:142264568-142318349:-|nuORF	162.25246889848123	0.0040893836092247005	6				NaN	NaN	0	NaN	7305	3251	10557
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10559	28.972	NaN	66958	30	0	24282	0.106				-1	 	0	74	432.23418836156844	862.4538237899369	2	432.2345886230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7306	3251	10557
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10560	28.974	NaN	20227	30	0	2672.5	0.106	+			10971	FEAQGKPEL	9	81	509.76274067914386	1017.5109284250877	2	509.76385498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FEAQGKPEL_	ENSG00000088356|ENST00000202017|PDRG1	82.49433358170734	0.08676306445403598	6				NaN	NaN	0	NaN	7307	3251	10557
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10561	28.976	NaN	6347.9	30	0	699.12	0.106	+			42851	TEFRNIQKL	9	78	574.8239889993284	1147.6334250654568	2	574.824951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TEFRNIQKL_	chr10:128113602-128116491|398|11.56|0.71|4.03|-|ENST00000368653|MKI67,MKI67;ENSG00000148773|ENST00000368654|MKI67;MKI67|p.L2374*|1|0.28|ENSG00000148773|chr10:128104719-128104719|A/-|frameshift_variant;MKI67|p.R3036Yfs*27|1|0.04|ENSG00000148773|chr10:128102735-128102736|-/AAAATAA|frameshift_variant;nc|ENSG00000148773|P46013-2|MKI67	58.22992032128504	0.22837015374068087	6				NaN	NaN	0	NaN	7308	3251	10557
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10562	28.978	NaN	38580	30	0	3486.1	0.106				-1	 	0	77	528.3152644554195	1054.615975977639	2	528.31640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7309	3251	10557
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10563	28.98	NaN	7595.5	30	0	865.21	0.106			+	37347	SLESLIQEPVS	11	80	601.3191761960277	NaN	0	601.3193359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLESLIQEPVS_	REV__ENST00000606011.1_1_13:96328766-96328880:-|nuORF	93.5975768576971	0.041817282876622466	6				NaN	NaN	0	NaN	7310	3251	10557
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10564	28.982	NaN	7154.2	30	0	1515.6	0.035			+	25259	LNLQRQLN	8	72	499.79007527451233	997.5655976158247	2	499.7904968261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LNLQRQLN_	REV__nc|ENSG00000254838|Q7Z2Y8|GVINP1	85.35947970620816	0.2915182781752196	6				NaN	NaN	0	NaN	7311	3251	10557
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10582	29.019	NaN	161350	30	0	38867	0.214				-1	 	0	93	352.5458234291712	1054.6156408877137	3	352.5464172363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7326	3254	10581
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10583	29.023	NaN	33043	30	0	8182.3	0.106				-1	 	0	82	452.26029821865666	902.5060435041133	2	452.2606506347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7327	3254	10581
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10584	29.025	NaN	25187	30	0	15587	0.106				-1	 	0	68	417.2426409571915	1248.7060934717745	3	417.2430419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7328	3254	10581
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10585	29.027	NaN	20965	30	0	8161	0.106	+			46724	VGPGPVRTL	9	80	448.2710443389159	894.5275357446318	2	448.2713317871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VGPGPVRTL_	ENSG00000074964|ENST00000361221|ARHGEF10L;ENST00000469726.5_1_1:17942561-18023872:+|nuORF;nc|ENSG00000074964|Q9HCE6-2|ARHGEF10L;nc|ENSG00000074964|Q9HCE6-3|ARHGEF10L;nc|ENSG00000074964|Q9HCE6-4|ARHGEF10L;nc|ENSG00000074964|Q9HCE6-5|ARHGEF10L	71.87747018426188	0.13267044672804276	6				NaN	NaN	0	NaN	7329	3254	10581
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10586	29.028	NaN	22141	30	0	2892.3	0.106			+	42745	TDLLTKQL	8	95	466.2762913366515	930.5380297401031	2	466.2763977050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TDLLTKQL_	REV__CLIP1|p.M1151Wfs*8|1|0.31|ENSG00000130779|chr12:122316771-122316771|T/-|frameshift_variant;REV__ENSG00000130779|ENST00000620786|CLIP1;REV__nc|ENSG00000130779|P30622-1|CLIP1;REV__nc|ENSG00000130779|P30622-2|CLIP1	93.19546047674547	0.2677966331495483	6				NaN	NaN	0	NaN	7330	3254	10581
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10587	29.03	NaN	22963	30	0	2309.9	0.034	+			17709	IEMLTVQN	8	77	474.2486342015133	946.4827154698266	2	474.25067138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IEMLTVQN_	tr|U7T422|U7T422_FUSNUPeptidyl-tRNAhydrolaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=pthPE=3SV=1	79.45101966838831	0.3281480470254892	6				NaN	NaN	0	NaN	7331	3254	10581
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10588	29.031	NaN	14735	30	0	2903	0.143	+			19111	IYKSMVQKF	9	82	381.8788788421357	1142.614807126607	3	381.87921142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IYKSMVQKF_	ENSG00000166866|ENST00000300119|MYO1A	70.8162118820467	0.13725933411854815	6				NaN	NaN	0	NaN	7332	3254	10581
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10606	29.069	NaN	43105	30	0	8029.2	0.214				-1	 	0	93	522.8177506099152	1043.6209482866302	2	522.8184814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7347	3257	10605
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10607	29.073	NaN	10694	30	0	2364.5	0.106	+			45822	VAIKAGTTL	9	75	437.273338149815	872.53212336643	2	437.273681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VAIKAGTTL_	ENSG00000166471|ENST00000528080|TMEM41B;ENST00000524543.5_1_11:9304973-9316821:-|nuORF;ENST00000533867.1_1_11:9304973-9309374:-|nuORF	85.16082228582465	0.07850854922700509	6				NaN	NaN	0	NaN	7348	3257	10605
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10608	29.075	NaN	12232	30	0	1162.2	0.106				-1	 	0	76	573.3054057527618	1144.5962585723234	2	573.3062744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7349	3257	10605
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10609	29.077	NaN	37720	30	0	5166.7	0.106	+			41380	SVMGVTVSR	9	83	468.2520258521153	934.4894987710306	2	468.2522888183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVMGVTVSR_	DIP2B|p.A1021Cfs*11|1|0.32|ENSG00000066084|chr12:50721279-50721280|-/CTGTATGCAC|frameshift_variant;DIP2B|p.I979Afs*17|1|0.13|ENSG00000066084|chr12:50718790-50718815|AAATAGAAGAGAATGATTTGGTGAGG/-|frameshift_variant;DIP2B|p.V1240Dfs*9|1|0.05|ENSG00000066084|chr12:50731445-50731446|-/ATATTTAC|frameshift_variant;DIP2B|p.V893Gfs*91|1|0.06|ENSG00000066084|chr12:50714417-50714418|-/G|frameshift_variant;ENSG00000066084|ENST00000301180|DIP2B	114.8945686534367	0.024290463251177924	6				NaN	NaN	0	NaN	7350	3257	10605
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10610	29.079	NaN	24615	30	0	5173.5	0.106			+	30369	PVHSKIFP	8	72	462.7680677319962	923.5215825307924	2	462.7684631347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PVHSKIFP_	REV__CFAP46|p.A499Sfs*24|2|0.32|ENSG00000171811|chr10:132922215-132922216|-/T|frameshift_variant;REV__CFAP46|p.E1364Rfs*56|1|0.3|ENSG00000171811|chr10:132878004-132878004|T/-|frameshift_variant;REV__CFAP46|p.E683Kfs*3|1|0.38|ENSG00000171811|chr10:132916623-132916623|G/-|frameshift_variant;REV__CFAP46|p.L933Wfs*7|1|0.45|ENSG00000171811|chr10:132908595-132908595|G/-|frameshift_variant;REV__CFAP46|p.V1485Cfs*2|1|0.35|ENSG00000171811|chr10:132872734-132872734|C/-|frameshift_variant;REV__ENSG00000171811|ENST00000368586|CFAP46;REV__ENST00000475340.1_1_10:134750974-134755988:-|nuORF;REV__nc|ENSG00000171811|Q8IYW2-2|CFAP46;REV__nc|ENSG00000171811|Q8IYW2-3|CFAP46	110.33723246496265	0.24497573416425186	6				NaN	NaN	0	NaN	7351	3257	10605
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10611	29.081	NaN	20117	30	0	15588	0.037			+	-1	WCVLVELCR	9	69	589.2969049610582	1176.5792569889163	2	589.2981567382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_WC(Carbamidomethyl (C))VLVELCR_	REV__HERVH-int_dup3527|chrX:4542813-4545870:-|8.094520876636611|0.0139942278604804|9.18|476.0|82|1|anti-sense	56.72105179125745	0.24094814563026265	6				NaN	NaN	0	NaN	7352	3257	10605
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10612	29.081	NaN	13112	30	0	3583.5	0.141	+			9228	EGSRVVTL	8	69	430.7438533067004	859.4731536802008	2	430.7453308105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EGSRVVTL_	ENSG00000121446|ENST00000294854|RGSL1;nc|ENSG00000121446|A5PLK6-6|RGSL1	51.33545320467046	0.5859736979383976	6				NaN	NaN	0	NaN	7353	3257	10605
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10630	29.119	NaN	45018	30	0	17363	0.214				-1	 	0	87	458.24205380124573	914.4695546692915	2	458.2423400878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7368	3260	10629
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10631	29.122	NaN	15637	30	0	5751	0.106				-1	 	0	78	413.2114042163635	1236.6123832492906	3	413.211669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7369	3260	10629
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10632	29.125	NaN	11908	30	0	3868.7	0.106				-1	 	0	82	480.72402124377226	959.4334895543445	2	480.72430419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7370	3260	10629
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10633	29.126	NaN	9857.8	30	0	1074.1	0.106	+			5472	AVAAFQVEK	9	74	481.76869770738296	NaN	0	481.7685852050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVAAFQVEK_	ENSG00000185000|ENST00000528718|DGAT1;ENST00000525371.1_1_8:145542007-145542573:-|nuORF;ENST00000531896.5_1_8:145541583-145550314:-|nuORF	56.43379154798735	0.16452882468284893	6				NaN	NaN	0	NaN	7371	3260	10629
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10634	29.128	NaN	10941	30	0	1388.9	0.106	+			27606	MPNGTVQRF	9	78	525.2624588746578	1048.5103648161155	2	525.2636108398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MPNGTVQRF_	BPTF|p.D2844Afs*20|1|0.08|ENSG00000171634|chr17:67959766-67959767|-/C|frameshift_variant;BPTF|p.K2718Nfs*36|3|0.12|ENSG00000171634|chr17:67948150-67948150|A/-|frameshift_variant;ENSG00000171634|ENST00000306378|BPTF;ENST00000582406.1_1_17:65940388-65941531:+|nuORF;ENST00000584931.1_1_17:65936727-65940601:+|nuORF;nc|ENSG00000171634|Q12830-4|BPTF;nc|ENSG00000171634|Q12830|BPTF	96.0336014099291	0.047854655524928534	6				NaN	NaN	0	NaN	7372	3260	10629
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10635	29.13	NaN	5592	30	0	993.02	0.035				-1	 	0	47	337.210681889444	1008.610216268532	3	337.2110900878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7373	3260	10629
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10636	29.131	NaN	17339	30	0	7304.3	0.142	+			30911	QEKVSDYEM	9	74	564.7464750085866	1127.478397083973	2	564.7476196289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QEKVSDYEM_	ENSG00000132646|ENST00000379143|PCNA	65.46538089061403	0.16805504838372562	6				NaN	NaN	0	NaN	7374	3260	10629
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10654	29.168	NaN	497960	30	0	166730	0.129				-1	GEMVARGSN	9	78	468.71350882797583	935.4124647227517	2	468.7138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_GEM(Oxidation (M))VARGSN_	ENSG00000137674|ENST00000260228|MMP20	56.72105179125745	0.24094814563026265	6				NaN	NaN	0	NaN	7389	3263	10653
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10655	29.17	NaN	35919	30	0	9102.6	0.106				-1	 	0	90	516.7526717017067	1031.4907904702134	2	516.7534790039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7390	3263	10653
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10656	29.172	NaN	32960	30	0	6319.4	0.106	+			16326	HEKFSEVL	8	91	494.75755198361134	987.5005510340227	2	494.75823974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HEKFSEVL_	CKB|p.G303D|1|0.22|ENSG00000166165|chr14:103520181-103520181|C/T|missense_variant;ENSG00000166165|ENST00000348956|CKB	120.62098272573253	0.23366758524054274	6				NaN	NaN	0	NaN	7391	3263	10653
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10657	29.174	NaN	29350	30	0	5112.4	0.106				-1	 	0	100	537.3204187776835	1072.6262846221668	2	537.3216552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7392	3263	10653
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10658	29.176	NaN	15993	30	0	2110.7	0.106	+			23987	LDVSGPKV	8	83	407.73710739889174	813.4596618645835	2	407.7369079589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LDVSGPKV_	AHNAK|p.A4215V|1|0.31|ENSG00000124942|chr11:62521773-62521773|G/A|missense_variant;AHNAK|p.I4226V|1|0.1|ENSG00000124942|chr11:62521741-62521741|T/C|missense_variant;AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK;ENSG00000124942|ENST00000378024|AHNAK;ENSG00000124942|ENST00000378024|AHNAK;ENSG00000124942|ENST00000378024|AHNAK;ENSG00000124942|ENST00000378024|AHNAK	93.19546047674547	0.2677966331495483	6				NaN	NaN	0	NaN	7393	3263	10653
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10659	29.178	NaN	11454	30	0	2429	0.106	+			29235	NVYEVVNPK	9	80	531.2840883806695	1060.5536238281388	2	531.284912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NVYEVVNPK_	ENSG00000139117|ENST00000331366|CPNE8	88.17693792209575	0.07000514020414955	6				NaN	NaN	0	NaN	7394	3263	10653
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10660	29.179	NaN	9310.4	30	0	1375.6	0.038				-1	SERHMKRSI	9	73	387.20451533878213	1158.5917166165464	3	387.2046203613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_SERHM(Oxidation (M))KRSI_	ENST00000263181.6_1_11:28119480-28129661:-|nuORF	36.446750945000026	0.4619375763483977	6				NaN	NaN	0	NaN	7395	3263	10653
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10678	29.217	NaN	13243	30	0	2190.3	0.214	+			43258	TEYETQVKV	9	80	548.779031639504	1095.5435103458078	2	548.780029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEYETQVKV_	ENSG00000120948|ENST00000240185|TARDBP;nc|ENSG00000120948|Q13148-4|TARDBP	106.68306549817024	0.032382560583716295	6				NaN	NaN	0	NaN	7410	3266	10677
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10679	29.221	NaN	14542	30	0	2244.3	0.106	+			42904	TEHINIHQL	9	91	552.7926104181203	1103.5706679030404	2	552.793701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEHINIHQL_	ENSG00000180353|ENST00000314583|HCLS1;ENST00000481314.5_1_3:121363541-121379717:-|nuORF;ENST00000487290.5_1_3:121363549-121379717:-|nuORF;nc|ENSG00000180353|P14317-2|HCLS1	87.69643885390035	0.07135982304947239	6				NaN	NaN	0	NaN	7411	3266	10677
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10680	29.223	NaN	205650	30	0	91875	0.106	+			49667	VYISEHEHF	9	114	387.51680650068107	1159.5285901022432	3	387.51708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYISEHEHF_	ENSG00000104853|ENST00000337392|CLPTM1;nc|ENSG00000104853|O96005-3|CLPTM1;nc|ENSG00000104853|O96005-4|CLPTM1	74.25504064058377	0.12238981753128622	6				NaN	NaN	0	NaN	7412	3266	10677
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10681	29.224	NaN	12058	30	0	2546	0.106				-1	 	0	80	451.2238732523449	900.4331935714898	2	451.2240295410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7413	3266	10677
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10682	29.226	NaN	17684	30	0	6003.2	0.106	+			49802	VYSPKSPSL	9	70	489.2681835702627	976.5218142073254	2	489.26849365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VYSPKSPSL_	ENSG00000102858|ENST00000262370|MGRN1;nc|ENSG00000102858|O60291-3|MGRN1;nc|ENSG00000102858|O60291-4|MGRN1;nc|ENSG00000102858|O60291|MGRN1	90.60085204095205	0.06317133949006545	6				NaN	NaN	0	NaN	7414	3266	10677
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10683	29.228	NaN	6958.6	30	0	827.92	0.035			+	-1	RCKCIGEK	8	77	497.2526244231155	992.490695913031	2	497.2530517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_RC(Carbamidomethyl (C))KCIGEK_	REV__COL12A1|p.R2964Gfs*113|1|0.28|ENSG00000111799|chr6:75090162-75090162|C/-|frameshift_variant	53.351449002276354	0.5676011784961348	6				NaN	NaN	0	NaN	7415	3266	10677
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10684	29.229	NaN	3619.7	30	0	552.21	0.143			+	64	AAASIEEDKLR	11	76	601.8215075190674	NaN	0	601.8223876953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AAASIEEDKLR_	REV__ENSG00000134318|ENST00000315872|ROCK2;REV__ROCK2|p.K1351Sfs*17|1|0.34|ENSG00000134318|chr2:11192259-11192259|T/-|frameshift_variant	56.43379154798735	0.26710304324494344	6				NaN	NaN	0	NaN	7416	3266	10677
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10702	29.268	NaN	40251	30	0	3576	0.197	+			35963	SEGRTFEM	8	104	478.7099653765092	955.4053778198185	2	478.71051025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEGRTFEM_	ENSG00000136068|ENST00000295956|FLNB;ENST00000481470.5_1_3:58118395-58154450:+|nuORF;nc|ENSG00000136068|O75369-2|FLNB;nc|ENSG00000136068|O75369-3|FLNB;nc|ENSG00000136068|O75369-4|FLNB;nc|ENSG00000136068|O75369-5|FLNB;nc|ENSG00000136068|O75369-6|FLNB;nc|ENSG00000136068|O75369-7|FLNB;nc|ENSG00000136068|O75369-8|FLNB;nc|ENSG00000136068|O75369-9|FLNB	54.776311868738084	0.5534952410049249	6				NaN	NaN	0	NaN	7431	3269	10701
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10703	29.271	NaN	49608	30	0	9056.2	0.106			+	6806	CGKFFPTFV	9	97	551.7736907547339	1101.5328285762678	2	551.7745971679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_C(Carbamidomethyl (C))GKFFPTFV_	REV__CHRNA6|p.L286Cfs*26|1|0.43|ENSG00000147434|chr8:42756342-42756342|A/-|frameshift_variant;REV__ENSG00000147434|ENST00000276410|CHRNA6;REV__ENST00000529467.1_1_8:42620195-42623609:-|nuORF;REV__ENST00000530869.1_1_8:42614249-42623609:-|nuORF;REV__nc|ENSG00000147434|Q15825-2|CHRNA6	60.97194046774394	0.20551255781574032	6				NaN	NaN	0	NaN	7432	3269	10701
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10704	29.273	NaN	23861	30	0	2770.2	0.106				-1	 	0	75	449.70590048545	897.3972480377	2	449.7060852050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7433	3269	10701
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10705	29.275	NaN	21118	30	0	5341.6	0.106	+			1927	AISDVIGNK	9	80	458.7582493142608	915.5019456953216	2	458.7584228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AISDVIGNK_	ENSG00000089902|ENST00000262241|RCOR1	82.7504851949679	0.08565546331141553	6				NaN	NaN	0	NaN	7434	3269	10701
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10706	29.277	NaN	30889	30	0	6210.2	0.093			+	8813	EELEEERQ	8	90	531.2420230377605	1060.469493142321	2	531.2381591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EELEEERQ_	REV__ENSG00000100941|ENST00000216832|PNN;REV__ENST00000557680.1_1_14:39648378-39651535:+|nuORF	68.78682469695295	0.41700713582915416	6				NaN	NaN	0	NaN	7435	3269	10701
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10707	29.279	NaN	27681	30	0	2848.2	0.106				-1	 	0	102	478.7609052394111	955.5072575456222	2	479.2628173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7436	3269	10701
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10708	29.28	NaN	8517.6	30	0	4381.2	0.036			+	-1	LSCLLSKVK	9	41	349.8806316326569	1046.6200654981708	3	349.8817443847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_LSC(Carbamidomethyl (C))LLSKVK_	REV__ENSG00000196335|ENST00000355870|STK31;REV__nc|ENSG00000196335|Q9BXU1-2|STK31;REV__nc|ENSG00000196335|Q9BXU1-3|STK31;REV__STK31|p.P983Qfs*16|1|0.32|ENSG00000196335|chr7:23832252-23832252|C/-|frameshift_variant	39.252832667884924	0.4290233611298554	6				NaN	NaN	0	NaN	7437	3269	10701
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10726	29.317	NaN	66504	30	0	8067.1	0.214			+	10074	ESIITAKV	8	98	430.7573017818402	859.5000506304805	2	430.7578430175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ESIITAKV_	REV__ENSG00000126561|ENST00000590949|STAT5A;REV__ENSG00000173757|ENST00000293328|STAT5B;REV__ENST00000468312.1_1_17:40370167-40384145:-|nuORF;REV__nc|ENSG00000126561|P42229-2|STAT5A;REV__STAT5B|p.H584Tfs*8|3|0.33|ENSG00000173757|chr17:42210428-42210429|-/T|frameshift_variant;REV__STAT5B|p.K583Nfs*16|2|0.34|ENSG00000173757|chr17:42210429-42210429|T/-|frameshift_variant	71.87747018426188	0.391254423828572	6				NaN	NaN	0	NaN	7452	3272	10725
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10727	29.321	NaN	76206	30	0	10671	0.106				-1	 	0	92	489.7530397523122	977.4915265714244	2	489.75360107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7453	3272	10725
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10728	29.323	NaN	27783	30	0	15808	0.106				-1	 	0	84	495.76558573618	989.51661853916	2	495.7662353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7454	3272	10725
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10729	29.325	NaN	28103	30	0	2395.1	0.106				-1	 	0	78	526.3103312943078	1050.6061096554156	2	526.3112182617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7455	3272	10725
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10730	29.326	NaN	26479	30	0	8155.2	0.106				-1	 	0	81	423.25765418154356	844.5007554298871	2	423.2581481933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7456	3272	10725
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10731	29.328	NaN	20097	30	0	5984.9	0.036	+			32400	QVDPNFYSK	9	93	549.2662851068839	1096.5180172805676	2	549.2672119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QVDPNFYSK_	ENSG00000176623|ENST00000406452|RMDN1;nc|ENSG00000176623|Q96DB5-2|RMDN1	80.45461616416974	0.09558281504443908	6				NaN	NaN	0	NaN	7457	3272	10725
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10732	29.329	NaN	12110	30	0	778.36	0.139				-1	 	0	81	478.7609052394111	955.5072575456222	2	478.76116943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7458	3272	10725
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10750	29.368	NaN	26061	30	0	4589.3	0.214				-1	 	0	81	501.30223631030447	1000.589919687409	2	501.30279541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7473	3275	10749
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10751	29.372	NaN	22120	30	0	5305.3	0.106				-1	 	0	65	471.24098457777615	940.4674162223523	2	471.2414245605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7474	3275	10749
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10752	29.374	NaN	8663.6	30	0	2074.5	0.106	+			32603	QYLEQSSKL	9	78	548.286771851678	1094.558990770156	2	548.2876586914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QYLEQSSKL_	CSTF3|p.K439Nfs*33|4|0.35|ENSG00000176102|chr11:33096364-33096364|T/-|frameshift_variant;ENSG00000176102|ENST00000323959|CSTF3	80.45461616416974	0.09558281504443908	6				NaN	NaN	0	NaN	7475	3275	10749
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10753	29.375	NaN	8714.4	30	0	1906.9	0.106	+			43854	TLWARPRR	8	51	352.5458234291712	1054.6156408877137	3	352.5464172363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TLWARPRR_	ENSG00000250510|ENST00000311268|GPR162;ENST00000535220.1_1_12:6933100-6934099:+|nuORF;GPR162|p.G221Vfs*71|1|0.37|ENSG00000250510|chr12:6824555-6824555|G/-|frameshift_variant;GPR162|p.G493Dfs*62|1|0.38|ENSG00000250510|chr12:6826911-6826911|G/-|frameshift_variant	20.481830146152948	0.8005983782650069	6				NaN	NaN	0	NaN	7476	3275	10749
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10754	29.377	NaN	7567.3	30	0	809.99	0.106	+			51212	YPSETTVKY	9	80	544.267775037124	1086.520997141048	2	544.2689819335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YPSETTVKY_	ENSG00000135862|ENST00000258341|LAMC1;LAMC1|p.T1225Kfs*5|1|0.07|ENSG00000135862|chr1:183132506-183132507|-/AAAT|frameshift_variant	132.757866228626	0.013877640931359021	6				NaN	NaN	0	NaN	7477	3275	10749
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10755	29.379	NaN	14479	30	0	4448.2	0.033			+	1253	AERTNGLL	8	77	437.2427889968948	872.4710250605896	2	437.2428283691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AERTNGLL_	REV__nc|ENSG00000140481|Q8N5R6-2|CCDC33	79.45101966838831	0.3281480470254892	6				NaN	NaN	0	NaN	7478	3275	10749
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10756	29.38	NaN	9120.8	30	0	878.88	0.138			+	31679	QNKKGSLL	8	73	444.26735191739897	886.520150901598	2	444.268310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QNKKGSLL_	REV__ENSG00000184863|ENST00000401878|RBM33;REV__nc|ENSG00000184863|Q96EV2-2|RBM33;REV__RBM33|p.G1030Afs*52|1|0.29|ENSG00000184863|chr7:155763915-155763915|G/-|frameshift_variant;REV__RBM33|p.L1031Pfs*109|1|0.35|ENSG00000184863|chr7:155763914-155763915|-/G|frameshift_variant;REV__RBM33|p.L72Cfs*20|1|0.31|ENSG00000184863|chr7:155678648-155678648|T/-|frameshift_variant;REV__RBM33|p.P374Rfs*4|1|0.3|ENSG00000184863|chr7:155711372-155711372|C/-|frameshift_variant;REV__RBM33|p.P840Qfs*31|1|0.17|ENSG00000184863|chr7:155745138-155745138|C/-|frameshift_variant;REV__RBM33|p.T776Qfs*17|1|0.24|ENSG00000184863|chr7:155742091-155742091|A/-|frameshift_variant	87.75429964447693	0.2842685068779738	6				NaN	NaN	0	NaN	7479	3275	10749
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10774	29.418	NaN	78046	30	0	35849	0.214				-1	 	0	85	451.25803073074997	900.5015085283	2	451.25848388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7494	3278	10773
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10775	29.421	NaN	13889	30	0	2131.6	0.106			+	27950	MVHVVYHA	8	79	478.2449977789903	954.4754426247806	2	478.2454833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MVHVVYHA_	REV__ENST00000482563.1_1_20:34293047-34295154:-|nuORF	33.49298260027079	0.7007254697536482	6				NaN	NaN	0	NaN	7495	3278	10773
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10776	29.423	NaN	17905	30	0	1987.3	0.106			+	9186	EGQILRLLA	9	83	506.8106494093748	1011.6067458855496	2	506.8109130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EGQILRLLA_	REV__ENSG00000056487|ENST00000313237|PHF21B;REV__nc|ENSG00000056487|Q96EK2-3|PHF21B;REV__nc|ENSG00000056487|Q96EK2-4|PHF21B	117.81106730687013	0.02252488733980868	6				NaN	NaN	0	NaN	7496	3278	10773
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10777	29.425	NaN	19868	30	0	2084.7	0.106			+	6113	AVNPGMAHM	9	81	464.21182663284856	926.4091003324971	2	464.2120666503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVNPGMAHM_	REV__tr|U7T3F0|U7T3F0_FUSNUOxaloacetatedecarboxylase,betasubunitOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00407PE=4SV=1	40.5726180659479	0.4135428067754104	6				NaN	NaN	0	NaN	7497	3278	10773
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10778	29.427	NaN	10387	30	0	4874.1	0.106	+			19615	KDGRQLLSI	9	65	343.87447173821704	NaN	0	343.87445068359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KDGRQLLSI_	ENSG00000072195|ENST00000312358|SPEG;nc|ENSG00000072195|Q15772-1|SPEG;SPEG|p.R3177Pfs*3|1|0.2|ENSG00000072195|chr2:219492170-219492171|-/G|frameshift_variant	42.396135135203025	0.2590952873412954	6				NaN	NaN	0	NaN	7498	3278	10773
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10779	29.429	NaN	8501.8	30	0	2672.4	0.036	+			49901	VYTTMAEHF	9	71	557.746574974943	1113.4785970166859	2	557.7478637695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_VYTTM(Oxidation (M))AEHF_	ENSG00000117472|ENST00000372003|TSPAN1;TSPAN1|p.T119M|1|0.33|ENSG00000117472|chr1:46184801-46184801|C/T|missense_variant	90.77665401227738	0.06267569666681755	6				NaN	NaN	0	NaN	7499	3278	10773
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10780	29.429	NaN	6920.4	30	0	1073.9	0.146	+			26673	LVGKPLRRRH	10	71	411.26712429411896	1230.7795434825568	3	411.2674865722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LVGKPLRRRH_	ENST00000366844.7_2_1:225755113-225840663:-|nuORF	12.811709888998246	0.7513471912541434	6				NaN	NaN	0	NaN	7500	3278	10773
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10798	29.465	NaN	110670	30	0	19592	0.143	+			3829	ATAIGMPVEK	10	84	508.7748902861311	1015.5352276390622	2	508.77587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATAIGMPVEK_	ENSG00000109736|ENST00000355443|MFSD10;ENST00000509676.1_1_4:2934766-2935650:-|nuORF;MFSD10|p.S111Gfs*48|1|0.44|ENSG00000109736|chr4:2933125-2933147|GGGCGCCTCCCCAAGCAGTCAGA/-|frameshift_variant	114.85826248499774	0.03459167991829056	6				NaN	NaN	0	NaN	7515	3281	10797
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10799	29.468	NaN	114290	30	0	38906	0.086				-1	 	0	93	453.2680899561959	904.5216269791919	2	453.26837158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7516	3281	10797
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10800	29.469	NaN	192590	30	0	19676	0.106	+			1626	AGMALGIQK	9	118	444.7513738686587	887.4881948041174	2	444.7519226074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AGMALGIQK_	ENSG00000174851|ENST00000376901|YIF1A	148.20599733432147	0.007287282186870133	6				NaN	NaN	0	NaN	7517	3281	10797
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10801	29.471	NaN	14163	30	0	2159.6	0.106	+			46282	VEIAAKNL	8	77	429.2575446144975	856.500536295795	2	429.2579040527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VEIAAKNL_	ENSG00000161533|ENST00000293217|ACOX1;nc|ENSG00000161533|Q15067-3|ACOX1;nc|ENSG00000161533|Q15067|ACOX1	101.60071028292904	0.24979566554663588	6				NaN	NaN	0	NaN	7518	3281	10797
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10802	29.473	NaN	11884	30	0	4684.8	0.106			+	13568	GLTCLEMII	9	63	496.76105354143823	991.5075541496765	2	496.7615661621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GLTCLEMII_	REV__ENSG00000169398|ENST00000696786|PTK2;REV__ENST00000519899.5_1_8:141756852-141774450:-|nuORF;REV__nc|ENSG00000169398|Q05397-2|PTK2;REV__nc|ENSG00000169398|Q05397-3|PTK2;REV__nc|ENSG00000169398|Q05397-4|PTK2;REV__nc|ENSG00000169398|Q05397-5|PTK2;REV__nc|ENSG00000169398|Q05397-7|PTK2;REV__nc|ENSG00000169398|Q05397|PTK2;REV__PTK2|p.P912Lfs*17|2|0.43|ENSG00000169398|chr8:140668399-140668399|G/-|frameshift_variant	44.116797842482775	0.37197099687881774	6				NaN	NaN	0	NaN	7519	3281	10797
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10803	29.475	NaN	17764	30	0	2217.5	0.106	+			45858	VALPGEVIK	9	86	463.28859630931055	924.5626396854211	2	463.28912353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VALPGEVIK_	ENST00000521905.1_1_8:96281101-96622903:+|nuORF	58.78195531508484	0.22376836668196862	6				NaN	NaN	0	NaN	7520	3281	10797
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10804	29.477	NaN	13462	30	0	4659.9	0.034			+	18882	IVHDNVTL	8	78	455.75236751717847	909.490182101157	2	455.75299072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IVHDNVTL_	REV__ENST00000216489.7_1_14:78139965-78140151:-|nuORF	55.50420428727701	0.5462892107279674	6				NaN	NaN	0	NaN	7521	3281	10797
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10805	29.477	NaN	4429.9	30	0	1120.3	0.143			+	36036	SEIRFNLNG	9	62	350.51689968845886	1048.5288696655766	3	350.5173034667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_SEIRFNLNG_	REV__INPP5J|p.D603N|1|0.38|ENSG00000185133|chr22:31127970-31127970|G/A|missense_variant	27.882242232435846	0.5426732730940306	6				NaN	NaN	0	NaN	7522	3281	10797
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10819	29.509	NaN	13242	30	0	5383	0.214			+	-1	LTQCLNAE	8	73	474.7243537240114	947.4341545148228	2	474.7245178222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_LTQC(Carbamidomethyl (C))LNAE_	REV__DDX4|p.I565Yfs*35|1|0.1|ENSG00000152670|chr5:55813745-55813745|A/-|frameshift_variant;REV__ENSG00000152670|ENST00000505374|DDX4;REV__nc|ENSG00000152670|Q9NQI0-2|DDX4;REV__nc|ENSG00000152670|Q9NQI0-3|DDX4;REV__nc|ENSG00000152670|Q9NQI0-4|DDX4	62.107414245175825	0.4809183816468817	6				NaN	NaN	0	NaN	7533	3284	10818
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10820	29.512	NaN	15920	30	0	1511.3	0.106				-1	GRRQACGY	8	89	484.2304921214533	966.4464313097067	2	484.2310791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GRRQAC(Carbamidomethyl (C))GY_	ENSG00000143315|ENST00000368090|PIGM	52.29916861842294	0.578018602984656	6				NaN	NaN	0	NaN	7534	3284	10818
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10821	29.514	NaN	28589	30	0	10038	0.106				-1	 	0	55	332.1935340058709	993.5587726178128	3	332.1941223144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7535	3284	10818
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10822	29.516	NaN	8894.4	30	0	798.8	0.106				-1	FLVFWFCL	8	75	377.8606133427921	1130.5600106285763	3	377.8608093261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_FLVFWFC(Carbamidomethyl (C))L_	ENSG00000182035|ENST00000537425|ADIG	54.76467175910256	0.5536104764165384	6				NaN	NaN	0	NaN	7536	3284	10818
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10823	29.518	NaN	13834	30	0	1721.8	0.106	+			14924	GTMAMTVVTK	10	83	519.7689591080211	1037.5233652828422	2	519.77001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTMAMTVVTK_	ENSG00000175115|ENST00000320580|PACS1;nc|ENSG00000175115|Q6VY07-2|PACS1	160.8219353732433	0.006574023344242491	6				NaN	NaN	0	NaN	7537	3284	10818
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10824	29.52	NaN	6967.7	30	0	2261.5	0.037				-1	SDGRRARVTC	10	76	589.2969049610582	1176.5792569889163	2	589.2982177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_SDGRRARVTC(Carbamidomethyl (C))_	CD6|p.A233Pfs*35|1|0.39|ENSG00000013725|chr11:61008757-61008757|G/-|frameshift_variant;ENSG00000013725|ENST00000313421|CD6;nc|ENSG00000013725|P30203-2|CD6;nc|ENSG00000013725|P30203-3|CD6;nc|ENSG00000013725|P30203-4|CD6;nc|ENSG00000013725|P30203-5|CD6;nc|ENSG00000013725|P30203-6|CD6;nc|ENSG00000013725|P30203-7|CD6	29.170058357718403	0.6416167986984785	6				NaN	NaN	0	NaN	7538	3284	10818
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10825	29.521	NaN	8306.5	30	0	515.71	0.141			+	24043	LEGKIIEA	8	77	436.7591832390304	871.5038135448608	2	436.7581481933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LEGKIIEA_	REV__ENSG00000187189|ENST00000420283|TSPYL4	69.6276240434122	0.4100012001731381	6				NaN	NaN	0	NaN	7539	3284	10818
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10843	29.559	NaN	18052	30	0	3481.5	0.215				-1	 	0	86	468.71350882797583	935.4124647227517	2	468.7137756347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7554	3287	10842
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10844	29.563	NaN	9501.2	30	0	953.3	0.106				-1	NYCLMITF	8	79	531.2420230377605	1060.469493142321	2	531.243896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_NYC(Carbamidomethyl (C))LMITF_	ENSG00000135404|ENST00000257857|CD63;nc|ENSG00000135404|P08962-2|CD63	45.9519527083369	0.6193794311207887	6				NaN	NaN	0	NaN	7555	3287	10842
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10845	29.565	NaN	3551	30	0	2161.4	0.106				-1	 	0	35	326.1899786623136	975.5481065871409	3	326.1905212402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7556	3287	10842
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10846	29.567	NaN	20951	30	0	4618.5	0.106			+	-1	YRCWIEFQ	8	84	601.276550262175	1200.5385475911498	2	601.2777099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_YRC(Carbamidomethyl (C))WIEFQ_	REV__ENSG00000168014|ENST00000334126|C2CD3;REV__nc|ENSG00000168014|Q4AC94-1|C2CD3;REV__nc|ENSG00000168014|Q4AC94-2|C2CD3;REV__nc|ENSG00000168014|Q4AC94-3|C2CD3;REV__nc|ENSG00000168014|Q4AC94-4|C2CD3	50.0245360154114	0.5941082100236891	6				NaN	NaN	0	NaN	7557	3287	10842
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10847	29.568	NaN	7889.7	30	0	783.93	0.106	+			45681	VAAAVSQAGGK	11	75	479.76801115055196	957.5214693679039	2	479.7688903808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VAAAVSQAGGK_	ENST00000410030.1_1_17:73900359-73901082:-|nuORF	41.42661286455405	0.5384226294179143	6				NaN	NaN	0	NaN	7558	3287	10842
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10848	29.57	NaN	10622	30	0	4495.3	0.03				-1	 	0	39	336.2269467370981	670.4393405409962	2	336.2274169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7559	3287	10842
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10849	29.571	NaN	4294.5	30	0	564.51	0.139			+	7551	DHIYVSDK	8	67	488.74022264229734	NaN	0	488.7398681640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DHIYVSDK_	REV__ENSG00000089022|ENST00000550735|MAPKAPK5;REV__nc|ENSG00000089022|Q8IW41|MAPKAPK5	53.351449002276354	1.7418937515398478	6				NaN	NaN	0	NaN	7560	3287	10842
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10867	29.61	NaN	25041	30	0	9515.3	0.214				-1	 	0	77	568.800143833732	1135.585734734264	2	568.8011474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7575	3290	10866
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10868	29.614	NaN	49495	30	0	3802.6	0.106				-1	IHCGDAMDLGL	11	95	580.7559714719572	1159.4973900107143	2	580.7576293945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_IHCGDAM(Oxidation (M))DLGL_	ENSG00000171428|ENST00000307719|NAT1	47.657333605630114	0.4531673460382624	6				NaN	NaN	0	NaN	7576	3290	10866
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10869	29.616	NaN	20321	30	0	7346.2	0.106	+			49668	VYISEHEHF	9	78	387.51680650068107	1159.5285901022432	3	387.51708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYISEHEHF_	ENSG00000104853|ENST00000337392|CLPTM1;nc|ENSG00000104853|O96005-3|CLPTM1;nc|ENSG00000104853|O96005-4|CLPTM1	58.78195531508484	0.22376836668196862	6				NaN	NaN	0	NaN	7577	3290	10866
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10870	29.617	NaN	29001	30	0	5972.1	0.106				-1	 	0	76	379.5359927554653	1135.586148866596	3	379.5362243652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7578	3290	10866
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10871	29.619	NaN	7451	30	0	1359.1	0.106			+	36785	SIAVHSTGYIA	11	63	373.53254572755924	1117.5758077828777	3	373.53271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SIAVHSTGYIA_	REV__ENSG00000011376|ENST00000645846|LARS2;REV__LARS2|p.M583Wfs*51|2|0.31|ENSG00000011376|chr3:45500561-45500561|A/-|frameshift_variant	27.882242232435846	0.6973292152807183	6				NaN	NaN	0	NaN	7579	3290	10866
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10872	29.621	NaN	5843.8	30	0	778.83	0.036				-1	LEMEPDKKL	9	73	559.794105164428	1117.5736573956558	2	559.7955932617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_LEM(Oxidation (M))EPDKKL_	ASH1L|p.I970Lfs*9|1|0.2|ENSG00000116539|chr1:155479962-155479962|T/-|frameshift_variant	95.81516180277367	0.04847050768394289	6				NaN	NaN	0	NaN	7580	3290	10866
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10873	29.622	NaN	11820	30	0	3566.8	0.146	+			19100	IYKDNRNLF	9	67	394.8799728692186	1181.6180892078557	3	394.8802185058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IYKDNRNLF_	ENSG00000007402|ENST00000424201|CACNA2D2;ENST00000487413.1_1_3:50453473-50541058:-|nuORF;nc|ENSG00000007402|Q9NY47-3|CACNA2D2;nc|ENSG00000007402|Q9NY47-4|CACNA2D2;nc|ENSG00000007402|Q9NY47-5|CACNA2D2;nc|ENSG00000007402|Q9NY47|CACNA2D2	47.657333605630114	0.33044192980041115	6				NaN	NaN	0	NaN	7581	3290	10866
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10891	29.658	NaN	210670	30	0	84162	0.181	+			14852	GTLMWHQMK	9	83	377.85213192017187	1130.5345663607156	3	377.8526611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTLMWHQMK_	ENST00000346169.6_1_3:184032401-184033585:+|nuORF;ENST00000352767.7_2_3:184032446-184033585:+|nuORF	45.9519527083369	0.35044536499095585	6				NaN	NaN	0	NaN	7596	3293	10890
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10892	29.661	NaN	62868	30	0	12517	0.106				-1	 	0	105	522.7582508532461	1043.501948773292	2	522.7590942382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7597	3293	10890
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10893	29.663	NaN	19969	30	0	8015.5	0.106	+			29086	NTMNITISK	9	82	511.2701652985981	1020.5257776639962	2	511.2709655761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NTMNITISK_	ENSG00000129003|ENST00000644861|VPS13C;nc|ENSG00000129003|Q709C8-2|VPS13C;nc|ENSG00000129003|Q709C8-3|VPS13C;nc|ENSG00000129003|Q709C8-4|VPS13C;VPS13C|p.E2463Nfs*18|1|0.25|ENSG00000129003|chr15:61920157-61920157|C/-|frameshift_variant;VPS13C|p.N3163Sfs*6|1|0.05|ENSG00000129003|chr15:61882732-61882733|-/TTATCATCAC|frameshift_variant;VPS13C|p.P3597Lfs*3|1|0.26|ENSG00000129003|chr15:61868732-61868732|G/-|frameshift_variant	109.82975700811294	0.02917171107062681	6				NaN	NaN	0	NaN	7598	3293	10890
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10894	29.665	NaN	25652	30	0	2340.9	0.106			+	46544	VFGEECRSCI	10	100	381.5032591095447	1141.487947928834	3	381.5036926269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VFGEECRSCI_	REV__ENSG00000196218|ENST00000359596|RYR1;REV__nc|ENSG00000196218|P21817-2|RYR1;REV__nc|ENSG00000196218|P21817-3|RYR1;REV__RYR1|p.C1268Afs*4|1|0.14|ENSG00000196218|chr19:38473407-38473407|C/-|frameshift_variant;REV__RYR1|p.D2713Tfs*33|1|0.11|ENSG00000196218|chr19:38504811-38504811|C/-|frameshift_variant;REV__RYR1|p.G249Efs*16|1|0.37|ENSG00000196218|chr19:38446709-38446709|G/-|frameshift_variant;REV__RYR1|p.P3303Tfs*8|1|0.36|ENSG00000196218|chr19:38517571-38517572|-/C|frameshift_variant	42.396135135203025	0.5270658956260207	6				NaN	NaN	0	NaN	7599	3293	10890
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10895	29.667	NaN	37969	30	0	2675.4	0.106			+	-1	PYMAMTTLK	9	111	371.8488550919536	1112.524735876061	3	371.8492126464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))PYMAM(Oxidation (M))TTLK_	REV__ENSG00000126858|ENST00000545287|RHOT1;REV__nc|ENSG00000126858|Q8IXI2-2|RHOT1;REV__nc|ENSG00000126858|Q8IXI2-3|RHOT1;REV__nc|ENSG00000126858|Q8IXI2-4|RHOT1;REV__nc|ENSG00000126858|Q8IXI2-5|RHOT1;REV__nc|ENSG00000126858|Q8IXI2|RHOT1	49.44154591367651	0.3095138337212152	6				NaN	NaN	0	NaN	7600	3293	10890
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10896	29.669	NaN	10815	30	0	1054.3	0.106				-1	 	0	62	434.74727239422157	867.4799918552432	2	434.7476501464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7601	3293	10890
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10897	29.671	NaN	13658	30	0	3558	0.034	+			26046	LSLLDLGSN	9	80	466.25870993955317	930.5028669459064	2	466.2581787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSLLDLGSN_	ENSG00000185792|ENST00000332836|NLRP9;nc|ENSG00000185792|Q7RTR0-2|NLRP9	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	7602	3293	10890
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10915	29.708	NaN	95429	30	0	31166	0.204			+	-1	GKPLHKMQTM	10	96	601.8050089710008	1201.5954650088015	2	601.80615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_GKPLHKM(Oxidation (M))QTM(Oxidation (M))_	REV__ENST00000393845.8_1_3:113146111-113146153:-|nuORF	44.377184641726394	0.5088115166961078	6				NaN	NaN	0	NaN	7617	3296	10914
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10916	29.712	NaN	37146	30	0	4695.8	0.106				-1	 	0	86	512.773993285588	1023.5334336379759	2	512.7747192382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7618	3296	10914
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10917	29.714	NaN	23577	30	0	2792.5	0.106				-1	 	0	74	480.7422253384726	959.4698977437453	2	480.7425537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7619	3296	10914
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10918	29.716	NaN	17069	30	0	3533.3	0.106	+			15520	GVCSTLTIK	9	75	489.7673080536992	977.5200631741984	2	489.7678527832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_GVC(Carbamidomethyl (C))STLTIK_	ENST00000589011.1_1_7:20201474-20224697:-|nuORF	112.41091882917199	0.026537921851008135	6				NaN	NaN	0	NaN	7620	3296	10914
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10919	29.717	NaN	15066	30	0	1746.4	0.106	+			19142	IYNGKVTSI	9	83	497.78175244591154	NaN	0	497.7817687988281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IYNGKVTSI_	ENSG00000067596|ENST00000262415|DHX8;ENST00000587044.1_1_17:41568567-41594747:+|nuORF	72.87924865735499	0.09578366712754152	6				NaN	NaN	0	NaN	7621	3296	10914
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10920	29.719	NaN	25652	30	0	1821.6	0.106			+	30366	PVHHRRPAPG	10	90	562.315808446949	1122.6170639606978	2	562.316650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PVHHRRPAPG_	REV__ENST00000369234.4_1_10:118030569-118032518:-|nuORF;REV__ENST00000439649.7_1_10:118030569-118032684:-|nuORF	31.954861631926434	0.6188749698950511	6				NaN	NaN	0	NaN	7622	3296	10914
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10921	29.721	NaN	19068	30	0	3104.1	0.036				-1	 	0	74	360.53380190896206	1078.5795763270862	3	360.5341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7623	3296	10914
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10939	29.758	NaN	36735	30	0	17398	0.214				-1	 	0	81	468.76042491855804	935.5062969039161	2	468.7607116699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7638	3299	10938
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10940	29.761	NaN	9599.2	30	0	1118.5	0.106	+			48182	VTADGALAMEK	11	77	553.2805494242963	1104.5465459153925	2	553.2816772460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTADGALAMEK_	ENSG00000058085|ENST00000264144|LAMC2;nc|ENSG00000058085|Q13753-2|LAMC2	173.2355992304161	1.9516618874335084E-05	6				NaN	NaN	0	NaN	7639	3299	10938
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10941	29.763	NaN	10097	30	0	3279.5	0.106	+			46045	VCETDGCSSEA	11	78	579.2087682486232	1156.4029835640463	2	579.2098999023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_VC(Carbamidomethyl (C))ETDGCSSEA_	ENSG00000164024|ENST00000296411|METAP1;ENST00000510209.5_1_4:99916904-99957225:+|nuORF;METAP1|p.A55Hfs*9|1|0.04|ENSG00000164024|chr4:99028914-99028915|-/CATTTTAAGGAATATT|frameshift_variant	40.77816245573522	0.5472954108598816	6				NaN	NaN	0	NaN	7640	3299	10938
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10942	29.765	NaN	7977	30	0	1145.4	0.106	+			15521	GVCSTLTIK	9	68	489.7673080536992	977.5200631741984	2	489.7676696777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_GVC(Carbamidomethyl (C))STLTIK_	ENST00000589011.1_1_7:20201474-20224697:-|nuORF	75.04331003522576	0.118981335847003	6				NaN	NaN	0	NaN	7641	3299	10938
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10943	29.767	NaN	12707	30	0	1406.5	0.106				-1	 	0	72	440.24976878565275	878.4849846381055	2	440.25006103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7642	3299	10938
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10944	29.769	NaN	10632	30	0	1166.3	0.037	+			26255	LSSSTEVVVMV	11	82	575.8053751924909	1149.5961974517818	2	575.8054809570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSSSTEVVVMV_	ENSG00000196159|ENST00000394329|FAT4;FAT4|p.A2521Sfs*37|1|0.11|ENSG00000196159|chr4:125448571-125448572|-/G|frameshift_variant;FAT4|p.D3606Sfs*31|1|0.07|ENSG00000196159|chr4:125451831-125451832|-/AGTAAAGG|frameshift_variant;FAT4|p.E3388Gfs*4|1|0.35|ENSG00000196159|chr4:125451179-125451179|A/-|frameshift_variant;FAT4|p.E4539Rfs*31|1|0.12|ENSG00000196159|chr4:125490431-125490431|C/-|frameshift_variant;FAT4|p.K4477Rfs*15|1|0.36|ENSG00000196159|chr4:125490247-125490247|G/-|frameshift_variant;FAT4|p.K4532Efs*21|1|0.37|ENSG00000196159|chr4:125490410-125490411|-/G|frameshift_variant;FAT4|p.K4532Rfs*38|1|0.19|ENSG00000196159|chr4:125490411-125490411|G/-|frameshift_variant;FAT4|p.L3734Ffs*22|1|0.27|ENSG00000196159|chr4:125452211-125452212|-/T|frameshift_variant;FAT4|p.L3734Yfs*8|2|0.3|ENSG00000196159|chr4:125452212-125452212|T/-|frameshift_variant;FAT4|p.Q4906Rfs*14|1|0.49|ENSG00000196159|chr4:125491536-125491536|C/-|frameshift_variant;FAT4|p.T3555Pfs*6|1|0.21|ENSG00000196159|chr4:125451679-125451679|A/-|frameshift_variant;nc|ENSG00000196159|Q6V0I7-2|FAT4;nc|ENSG00000196159|Q6V0I7-3|FAT4;nc|ENSG00000196159|Q6V0I7|FAT4	54.776311868738084	0.3700837260462177	6				NaN	NaN	0	NaN	7643	3299	10938
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10945	29.769	NaN	13980	30	0	1701.5	0.142	+			33604	RLQEIFTEK	9	92	582.3239642492457	1162.6333755652913	2	582.3246459960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RLQEIFTEK_	ENSG00000168818|ENST00000306200|STX18;ENST00000503692.5_1_4:4422578-4426973:-|nuORF	81.52500206392136	0.09095445986635249	6				NaN	NaN	0	NaN	7644	3299	10938
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10963	29.807	NaN	28002	30	0	4176.6	0.214	+			16376	HENEDIYKL	9	89	580.7822602518838	1159.5499675705676	2	580.7830200195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HENEDIYKL_	ENSG00000102753|ENST00000261667|KPNA3;ENSG00000186432|ENST00000334256|KPNA4	143.37361013837676	0.008897369944672323	6				NaN	NaN	0	NaN	7659	3302	10962
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10964	29.811	NaN	13879	30	0	1986.3	0.106	+			38470	SSASALTGLTK	11	82	518.2883737484518	1034.5621945637035	2	518.2877807617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSASALTGLTK_	ENSG00000164880|ENST00000404767|INTS1;INTS1|p.Q467Afs*140|1|0.05|ENSG00000164880|chr7:1498439-1498440|-/A|frameshift_variant;INTS1|p.R843Pfs*31|1|0.39|ENSG00000164880|chr7:1487438-1487439|-/G|frameshift_variant	128.3478880297481	0.0041339947484058445	6				NaN	NaN	0	NaN	7660	3302	10962
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10965	29.812	NaN	24212	30	0	2080.9	0.106	+			35881	SEEGLRNAL	9	92	494.75580175889536	987.4970505845907	2	494.7563171386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEEGLRNAL_	ENSG00000119705|ENST00000557342|SLIRP;nc|ENSG00000119705|Q9GZT3-2|SLIRP	85.16082228582465	0.07850854922700509	6				NaN	NaN	0	NaN	7661	3302	10962
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10966	29.814	NaN	17794	30	0	3258.5	0.106	+			47006	VKVGHVQY	8	82	465.2631282272924	928.5117035213848	2	465.263427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VKVGHVQY_	ENSG00000112874|ENST00000230792|NUDT12;nc|ENSG00000112874|Q9BQG2-2|NUDT12	42.47446043378293	0.6409579893742323	6				NaN	NaN	0	NaN	7662	3302	10962
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10967	29.816	NaN	11458	30	0	2833.7	0.106	+			18269	IPENRVVSY	9	86	538.7896661798379	1075.5647794264758	2	538.7904052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IPENRVVSY_	ENSG00000106178|ENST00000222902|CCL24	76.16968421966216	0.11411088698345859	6				NaN	NaN	0	NaN	7663	3302	10962
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10968	29.818	NaN	13585	30	0	2862.8	0.035				-1	AIQAMIMSV	9	77	498.25038544856056	994.4862179639211	2	498.2508239746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Oxidation (M)	_AIQAM(Oxidation (M))IM(Oxidation (M))SV_	tr|U7SIU9|U7SIU9_FUSNUarginaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02241PE=3SV=1	35.61828744233558	0.47037581924408073	6				NaN	NaN	0	NaN	7664	3302	10962
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10969	29.819	NaN	11070	30	0	1551.2	0.139	+			5671	AVDSQILPK	9	77	485.7815138156808	969.5484746981616	2	485.7815856933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AVDSQILPK_	ENSG00000089009|ENST00000202773|RPL6;ENST00000456481.1_1_7:137407104-137407545:+|nuORF;ENST00000489915.1_1_18:6462145-6462637:-|nuORF	82.7504851949679	0.08565546331141553	6				NaN	NaN	0	NaN	7665	3302	10962
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10987	29.855	NaN	25698	30	0	18281	0.214	+			305	AAPGPHVAL	9	64	416.73692587259376	831.4592988119875	2	416.7373962402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAPGPHVAL_	ENSG00000156381|ENST00000286918|ANKRD9	72.61992398637584	0.12946007194610515	6				NaN	NaN	0	NaN	7680	3305	10986
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10988	29.859	NaN	21445	30	0	2539.2	0.106	+			17722	IENGKVVSI	9	92	479.7811094487424	957.5476659642849	2	479.7818298339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IENGKVVSI_	ENSG00000176658|ENST00000318217|MYO1D	96.66504779109242	0.04607440320619715	6				NaN	NaN	0	NaN	7681	3305	10986
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10989	29.861	NaN	15867	30	0	2128.6	0.106				-1	 	0	74	511.2811256122826	1020.5476982913652	2	511.2818908691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7682	3305	10986
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10990	29.863	NaN	19983	30	0	2717.9	0.106				-1	 	0	72	469.28888541238933	936.5632178915787	2	469.289306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7683	3305	10986
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10991	29.865	NaN	12748	30	0	5220.3	0.106				-1	 	0	70	476.26011244439246	475.2528359777925	1	476.26068115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7684	3305	10986
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10992	29.866	NaN	9560.3	30	0	708.6	0.033	+			702	AEALVSKGL	9	78	444.263104826081	886.5116567189621	2	444.2633361816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEALVSKGL_	ENSG00000197157|ENST00000354725|SND1;GAS2L3-SND1|1|fusion;SND1|p.A514Qfs*156|1|0.37|ENSG00000197157|chr7:127929195-127929195|A/-|frameshift_variant	88.17693792209575	0.07000514020414955	6				NaN	NaN	0	NaN	7685	3305	10986
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10993	29.867	NaN	5204.7	30	0	873.71	0.138				-1	 	0	60	422.268007390019	842.5214618468381	2	422.2685241699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7686	3305	10986
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11011	29.906	NaN	24830	30	0	3482	0.214	+			50414	YAAQASQAL	9	73	461.734554233991	921.454555534782	2	461.7348327636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YAAQASQAL_	ENSG00000118705|ENST00000237530|RPN2;ENST00000462163.1_1_20:35807747-35832332:+|nuORF;RPN2|p.G196Afs*41|1|0.12|ENSG00000118705|chr20:37204794-37204794|G/-|frameshift_variant	143.8867514904718	0.008656634767784652	6				NaN	NaN	0	NaN	7701	3308	11010
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11012	29.91	NaN	10196	30	0	1582.7	0.106	+			25528	LPTENVDKM	9	70	523.7622223846181	1045.509891836036	2	523.7634887695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LPTENVDKM_	ENSG00000198420|ENST00000479870|TCAF1;ENST00000392900.3_1_7:143551228-143582358:-|nuORF;ENST00000414990.2_3_7:143295168-143301929:+|nuORF;nc|ENSG00000198420|Q9Y4C2-2|TCAF1	134.7655990226056	0.012935733000282069	6				NaN	NaN	0	NaN	7702	3308	11010
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11013	29.912	NaN	6675.9	30	0	633.73	0.106	+			6734	CAPGRWLLA	9	79	493.76618271607623	985.5178124989525	2	493.76654052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_CAPGRWLLA_	ENST00000395989.7_3_20:50715116-50721421:-|nuORF	33.51558372728122	0.4900267029546261	6				NaN	NaN	0	NaN	7703	3308	11010
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11014	29.914	NaN	13135	30	0	1559.5	0.106	+			12555	GEGHFGKVEL	10	84	536.7739441677876	1071.533335402375	2	536.775146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEGHFGKVEL_	ENSG00000162434|ENST00000342505|JAK1;ENST00000481702.1_1_1:65305238-65306936:-|nuORF	76.16968421966216	0.22691431239609447	6				NaN	NaN	0	NaN	7704	3308	11010
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11015	29.916	NaN	10010	30	0	2981.7	0.106			+	36313	SESKDSFMK	9	73	529.7434667199109	1057.4723805066217	2	529.7451782226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SESKDSFMK_	REV__ENSG00000188738|ENST00000424728|FSIP2;REV__FSIP2|p.D5579Mfs*10|1|0.09|ENSG00000188738|chr2:185806029-185806029|A/-|frameshift_variant;REV__FSIP2|p.K6152Rfs*27|1|0.43|ENSG00000188738|chr2:185807758-185807758|A/-|frameshift_variant;REV__FSIP2|p.K6528Nfs*5|1|0.33|ENSG00000188738|chr2:185808884-185808884|A/-|frameshift_variant;REV__FSIP2|p.V5734Yfs*24|2|0.23|ENSG00000188738|chr2:185806499-185806499|A/-|frameshift_variant;REV__FSIP2|p.V6322*|1|0.42|ENSG00000188738|chr2:185808265-185808265|A/-|frameshift_variant;REV__nc|ENSG00000188738|Q5CZC0-2|FSIP2	30.317721548370564	0.5199124245378496	6				NaN	NaN	0	NaN	7705	3308	11010
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11016	29.917	NaN	11525	30	0	3130.9	0.035	+			48620	VTSFQTSTM	9	77	501.23346038673185	1000.4523678402637	2	501.23388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTSFQTSTM_	ENSG00000173706|ENST00000311127|HEG1;HEG1|p.P754L|1|0.29|ENSG00000173706|chr3:125013318-125013318|G/A|missense_variant;HEG1|p.P916Lfs*2|1|0.07|ENSG00000173706|chr3:125012832-125012832|G/-|frameshift_variant;HEG1|p.S1105Qfs*21|1|0.12|ENSG00000173706|chr3:125002300-125002300|A/-|frameshift_variant;nc|ENSG00000173706|Q9ULI3-2|HEG1	49.44154591367651	0.3095138337212152	6				NaN	NaN	0	NaN	7706	3308	11010
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11017	29.918	NaN	7244.5	30	0	886.4	0.139			+	37909	SPCPAIRLS	9	74	472.25466261612456	942.4947722990491	2	472.25506591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SPCPAIRLS_	REV__ENSG00000115325|ENST00000233668|DOK1;REV__nc|ENSG00000115325|Q99704-3|DOK1	34.172542307311794	0.4838870758800184	6				NaN	NaN	0	NaN	7707	3308	11010
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11035	29.957	NaN	370010	30	0	143820	0.167				-1	 	0	72	439.26013333074104	876.5057137282821	2	439.2604064941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7722	3311	11034
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11036	29.96	NaN	55833	30	0	8303.6	0.106	+			6028	AVMEMMSQK	9	90	527.7393765334232	1053.4642001336463	2	527.740478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVMEMMSQK_	ENSG00000123349|ENST00000334478|PFDN5;ENST00000552341.5_1_12:53691573-53693126:+|nuORF;nc|ENSG00000123349|Q99471-3|PFDN5	117.81106730687013	0.02252488733980868	6				NaN	NaN	0	NaN	7723	3311	11034
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11037	29.962	NaN	9032.3	30	0	1635.9	0.106	+			16123	HDVVVENNL	9	75	519.763986792737	1037.513420652274	2	519.7648315429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HDVVVENNL_	ENSG00000163918|ENST00000296273|RFC4	80.45461616416974	0.09558281504443908	6				NaN	NaN	0	NaN	7724	3311	11034
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11038	29.964	NaN	12517	30	0	1506.1	0.106	+			37036	SIQVVVVQK	9	73	500.3127319014191	998.6109108696382	2	500.31329345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SIQVVVVQK_	ENSG00000197702|ENST00000334956|PARVA;ENST00000533345.5_1_11:12419899-12534890:+|nuORF	83.6470233535746	0.08277643980271215	6				NaN	NaN	0	NaN	7725	3311	11034
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11039	29.966	NaN	6375.3	30	0	1114.4	0.106	+			16727	HLHAMAFY	8	68	495.2373020586459	988.4600511840919	2	495.2376403808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HLHAMAFY_	ENSG00000156928|ENST00000466681|MALSU1;ENST00000481564.1_1_7:23338971-23340720:+|nuORF	33.49298260027079	0.7007254697536482	6				NaN	NaN	0	NaN	7726	3311	11034
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11040	29.968	NaN	7796.1	30	0	1562.5	0.106			+	9059	EGGGKWEEVI	10	84	552.2723430433633	1102.5301331535265	2	552.2728881835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EGGGKWEEVI_	REV__ENST00000379103.7_1_17:26205529-26205697:-|nuORF	56.72105179125745	0.3956618550748046	6				NaN	NaN	0	NaN	7727	3311	11034
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11041	29.97	NaN	12457	30	0	3372	0.038			+	-1	PCCPNGRLLM	10	81	387.51680650068107	1159.5285901022432	3	387.51702880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_PCC(Carbamidomethyl (C))PNGRLLM_	REV__ENST00000557000.2_1_14:94393884-94394645:+|nuORF	49.536043120802724	0.461275219792494	6				NaN	NaN	0	NaN	7728	3311	11034
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11059	30.007	NaN	35552	30	0	6989.4	0.214			+	8323	EAKGTVSWK	9	91	503.27097729110153	1004.5274016490031	2	503.271728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EAKGTVSWK_	REV__ENSG00000089225|ENST00000405440|TBX5;REV__nc|ENSG00000089225|Q99593-2|TBX5;REV__nc|ENSG00000089225|Q99593-3|TBX5;REV__TBX5|p.E486*|1|0.4|ENSG00000089225|chr12:114355634-114355635|-/G|frameshift_variant	101.25262130126117	0.03792372629710479	6				NaN	NaN	0	NaN	7743	3314	11058
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11060	30.011	NaN	22582	30	0	6238.2	0.106				-1	 	0	68	425.2444512579142	848.4743495826284	2	425.24493408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7744	3314	11058
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11061	30.013	NaN	17782	30	0	2125.6	0.106				-1	 	0	82	410.7188180348542	819.4230831365085	2	410.7192077636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7745	3314	11058
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11062	30.015	NaN	29867	30	0	3229.1	0.106	+			460	AAVLRSAAL	9	71	436.2712525504883	870.5279521677767	2	436.27178955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AAVLRSAAL_	ENSG00000167741|ENST00000381550|GGT6;nc|ENSG00000167741|Q6P531-2|GGT6;nc|ENSG00000167741|Q6P531|GGT6	93.1432384553994	0.056003526918089595	6				NaN	NaN	0	NaN	7746	3314	11058
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11063	30.016	NaN	9151.5	30	0	974.51	0.106			+	51136	YNKPIEEE	8	81	511.24690529230895	NaN	0	511.2463684082031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YNKPIEEE_	REV__ENSG00000196367|ENST00000456197|TRRAP;REV__nc|ENSG00000196367|Q9Y4A5-2|TRRAP;REV__nc|ENSG00000196367|Q9Y4A5|TRRAP;REV__TRRAP-ASNS|1|fusion;REV__TRRAP-ASNS|2|fusion;REV__TRRAP|p.K3443Sfs*19|1|0.28|ENSG00000196367|chr7:99004246-99004246|A/-|frameshift_variant	57.81127852772723	1.7418937515398478	6				NaN	NaN	0	NaN	7747	3314	11058
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11064	30.018	NaN	12843	30	0	2678.7	0.033				-1	 	0	80	443.77085794078107	885.5271629483622	2	443.77117919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7748	3314	11058
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11065	30.019	NaN	10044	30	0	860.41	0.141			+	-1	LPGWCPPHL	9	82	538.7707962377434	1075.5270395422867	2	538.7720947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_LPGWC(Carbamidomethyl (C))PPHL_	REV__ENST00000373109.6_1_10:73821377-73821602:-|nuORF	39.021493756699265	0.43173687394350213	6				NaN	NaN	0	NaN	7749	3314	11058
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11083	30.058	NaN	50971	30	0	9253.7	0.215	+			49280	VVQEPGQVFK	10	91	565.8133517593448	1129.6121505854894	2	565.8142700195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVQEPGQVFK_	ENSG00000169180|ENST00000304658|XPO6;ENST00000570007.1_1_16:28117306-28117714:-|nuORF;nc|ENSG00000169180|Q96QU8-2|XPO6;XPO6|p.P1120Lfs*4|1|0.28|ENSG00000169180|chr16:28098557-28098557|G/-|frameshift_variant	142.36107225718385	0.01012457621782354	6				NaN	NaN	0	NaN	7764	3317	11082
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11084	30.062	NaN	15444	30	0	5020	0.106			+	-1	GKPLHKMQTM	10	87	601.8050089710008	1201.5954650088015	2	601.8062744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Oxidation (M)	_GKPLHKM(Oxidation (M))QTM(Oxidation (M))_	REV__ENST00000393845.8_1_3:113146111-113146153:-|nuORF	37.81151784470057	0.569310847604193	6				NaN	NaN	0	NaN	7765	3317	11082
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11085	30.064	NaN	17484	30	0	2576.4	0.106	+			50796	YENTKLLSA	9	80	519.7760748741199	1037.5375968150397	2	519.7772216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YENTKLLSA_	ENSG00000127324|ENST00000247829|TSPAN8;ENST00000552128.2_1_12:71519116-71532942:-|nuORF	136.98908636845044	0.011892605960677736	6				NaN	NaN	0	NaN	7766	3317	11082
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11086	30.066	NaN	38626	30	0	6287.4	0.106	+			5103	ATSPALFNR	9	89	488.76375608447137	975.5129592357428	2	488.7640075683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATSPALFNR_	DYNC1H1|p.K3112Hfs*3|1|0.31|ENSG00000197102|chr14:102027998-102027999|-/TCACAAG|frameshift_variant;DYNC1H1|p.R3078W|1|0.11|ENSG00000197102|chr14:102027802-102027802|C/T|missense_variant;DYNC1H1|p.W4201Gfs*43|1|0.42|ENSG00000197102|chr14:102043958-102043958|G/-|frameshift_variant;ENSG00000197102|ENST00000360184|DYNC1H1	87.69643885390035	0.07135982304947239	6				NaN	NaN	0	NaN	7767	3317	11082
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11087	30.068	NaN	29312	30	0	5785.1	0.106	+			16227	HEDLGHVAL	9	93	495.75347272633076	989.4923925194615	2	495.7538757324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HEDLGHVAL_	ENSG00000128731|ENST00000261609|HERC2;ENST00000428453.5_1_15:20588586-20667676:-|nuORF;ENST00000430598.5_1_15:20613931-20667676:-|nuORF;ENST00000524476.5_1_15:28882105-28886289:+|nuORF;ENST00000529353.1_1_15:28878360-28886587:+|nuORF;ENST00000529624.5_3_15:28877823-28916776:+|nuORF;ENST00000562687.6_3_16:32769598-32772029:+|nuORF;HERC2|p.G2202Afs*8|1|0.2|ENSG00000128731|chr15:28213923-28213923|C/-|frameshift_variant;HERC2|p.K1446R|1|0.36|ENSG00000128731|chr15:28233678-28233678|T/C|missense_variant;nc|ENSG00000290376|Q9BVR0|HERC2P3	97.47269410471826	0.04379738608259218	6				NaN	NaN	0	NaN	7768	3317	11082
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11088	30.069	NaN	10080	30	0	1618.6	0.034	+			38211	SQGGELSRC	9	74	468.71350882797583	935.4124647227517	2	468.7139892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SQGGELSRC_	ENSG00000148396|ENST00000684901|SEC16A;nc|ENSG00000148396|O15027-5|SEC16A	37.81151784470057	0.4459294069877048	6				NaN	NaN	0	NaN	7769	3317	11082
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11089	30.07	NaN	21210	30	0	3155.1	0.141	+			38495	SSATLNSIVAK	11	80	545.8072957997098	1089.6000386662195	2	545.8091430664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSATLNSIVAK_	ENSG00000007944|ENST00000356840|MYLIP;MYLIP|p.K199Rfs*26|1|0.07|ENSG00000007944|chr6:16143150-16143151|-/GAATT|frameshift_variant;MYLIP|p.R317Kfs*8|1|0.09|ENSG00000007944|chr6:16145014-16145015|-/A|frameshift_variant	150.15188659993407	7.025925813289175E-05	6				NaN	NaN	0	NaN	7770	3317	11082
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11107	30.109	NaN	159990	30	0	37048	0.165	+			48305	VTEGSFVYK	9	82	515.2658215615982	1028.5170901899962	2	515.266357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTEGSFVYK_	ENSG00000057608|ENST00000380191|GDI2;GDI2|p.S222Afs*20|1|0.1|ENSG00000057608|chr10:5785197-5785197|T/-|frameshift_variant	180.86945649972546	0.001208757763874378	6				NaN	NaN	0	NaN	7785	3320	11106
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11108	30.112	NaN	98564	30	0	18056	0.106	+			10500	EVSKIVQTY	9	93	533.7922372370543	1065.5699215409086	2	533.7929077148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EVSKIVQTY_	ENSG00000072110|ENST00000394419|ACTN1;nc|ENSG00000072110|P12814-2|ACTN1;nc|ENSG00000072110|P12814-4|ACTN1;nc|ENSG00000072110|P12814|ACTN1	168.25843898104137	0.0030641937004078144	6				NaN	NaN	0	NaN	7786	3320	11106
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11109	30.114	NaN	11802	30	0	1626.4	0.106	+			6112	AVNNMFVSK	9	82	505.26025147339277	1008.5059500135856	2	505.26025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVNNMFVSK_	ENSG00000100744|ENST00000555181|GSKIP	114.8945686534367	0.024290463251177924	6				NaN	NaN	0	NaN	7787	3320	11106
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11110	30.116	NaN	23398	30	0	2145.6	0.106	+			8568	EAWASKDATY	10	82	571.261113059042	1140.507673184884	2	571.2619018554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EAWASKDATY_	ENSG00000166508|ENST00000303887|MCM7;nc|ENSG00000166508|P33993-3|MCM7	218.57678817001025	4.168460480203771E-10	6				NaN	NaN	0	NaN	7788	3320	11106
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11111	30.118	NaN	13860	30	0	3313.8	0.106			+	43845	TLTLYYESE	9	75	373.5135183389019	1117.5187256169058	3	373.5137023925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TLTLYYESE_	REV__tr|U7SYR5|U7SYR5_FUSNUAAA+ATPasedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00888PE=3SV=1	44.116797842482775	0.37197099687881774	6				NaN	NaN	0	NaN	7789	3320	11106
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11112	30.12	NaN	15927	30	0	3376.3	0.106	+			15038	GTNPFATVK	9	86	467.7532737853884	933.4919946375768	2	467.7530517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTNPFATVK_	ENSG00000128298|ENST00000381669|BAIAP2L2;nc|ENSG00000128298|Q6UXY1-2|BAIAP2L2	106.68306549817024	0.032382560583716295	6				NaN	NaN	0	NaN	7790	3320	11106
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11113	30.121	NaN	17412	30	0	6880.9	0.039			+	5080	ATSLVDQQLRL	11	71	415.23798080829954	1242.6921130250987	3	415.2381896972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATSLVDQQLRL_	REV__ENST00000368750.7_1_1:153066129-153066971:-|nuORF	41.080066990542036	0.5431644350485484	6				NaN	NaN	0	NaN	7791	3320	11106
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11131	30.157	NaN	45594	30	0	7430.1	0.197	+			30698	QDAKMAGIGI	10	99	502.26568957847945	NaN	0	502.2659606933594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QDAKMAGIGI_	CON__P19012	67.49366992349736	0.17308373824428946	6				NaN	NaN	0	NaN	7806	3323	11130
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11132	30.16	NaN	22238	30	0	3821.1	0.106	+			25576	LQERTAQL	8	86	479.7694600803486	NaN	0	479.7696228027344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LQERTAQL_	nc|ENSG00000253868|Q96M78|FER1L6-AS2	90.36981228632155	1.7418937515398478	6				NaN	NaN	0	NaN	7807	3323	11130
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11133	30.162	NaN	10916	30	0	5948.4	0.106	+			42429	TALANQIPTV	10	73	343.19894522295374	NaN	0	343.1990051269531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TALANQIPTV_	ENSG00000095002|ENST00000233146|MSH2;MSH2|p.M813Nfs*11|1|0.17|ENSG00000095002|chr2:47478497-47478498|-/A|frameshift_variant;MSH2|p.T806Kfs*4|1|0.2|ENSG00000095002|chr2:47478472-47478478|CACTCAC/-|frameshift_variant;nc|ENSG00000095002|P43246-2|MSH2	26.063383197487333	0.4145965855542893	6				NaN	NaN	0	NaN	7808	3323	11130
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11134	30.164	NaN	16716	30	0	3992.8	0.106				-1	 	0	66	460.24872149772125	918.4828900622425	2	460.24951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7809	3323	11130
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11135	30.166	NaN	14696	30	0	1301	0.106	+			36867	SIFRTPISK	9	90	524.8106214221212	1047.6066899110424	2	524.8116455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SIFRTPISK_	ASPM|p.I1717Nfs*24|1|0.43|ENSG00000066279|chr1:197104101-197104102|-/T|frameshift_variant;ASPM|p.I3229Nfs*2|1|0.48|ENSG00000066279|chr1:197090339-197090340|-/T|frameshift_variant;ASPM|p.K671Nfs*3|1|0.21|ENSG00000066279|chr1:197139780-197139780|T/-|frameshift_variant;ASPM|p.L1872Ffs*24|1|0.43|ENSG00000066279|chr1:197103635-197103636|-/A|frameshift_variant;ASPM|p.M2261*|1|0.44|ENSG00000066279|chr1:197102470-197102470|T/-|frameshift_variant;ASPM|p.N1062Rfs*28|1|0.1|ENSG00000066279|chr1:197124311-197124315|TAAGT/-|frameshift_variant;ASPM|p.N1680Kfs*11|1|0.33|ENSG00000066279|chr1:197104211-197104212|-/T|frameshift_variant;ASPM|p.Q2620Nfs*22|1|0.15|ENSG00000066279|chr1:197101393-197101394|-/TT|frameshift_variant;ASPM|p.Q2620Tfs*17|1|0.19|ENSG00000066279|chr1:197101393-197101394|-/T|frameshift_variant;ENSG00000066279|ENST00000367409|ASPM;nc|ENSG00000066279|Q8IZT6-2|ASPM	125.71293069911285	0.017741295328254008	6				NaN	NaN	0	NaN	7810	3323	11130
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11136	30.168	NaN	8296.3	30	0	698.34	0.106	+			25990	LSKGPGLEV	9	83	450.2632066497252	898.5118603662504	2	450.26385498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSKGPGLEV_	ENSG00000135723|ENST00000258201|FHOD1;ENST00000569085.1_1_16:67263541-67263664:-|nuORF	52.936696900407355	0.27249468807391813	6				NaN	NaN	0	NaN	7811	3323	11130
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11137	30.17	NaN	8380.7	30	0	1881.6	0.037				-1	STMESSLEFT	10	71	574.2443247610744	1146.4740965889487	2	574.2457275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_STM(Oxidation (M))ESSLEFT_	ENSG00000121064|ENST00000262288|SCPEP1;ENST00000570505.1_1_17:55072921-55075417:+|nuORF;ENST00000570589.5_1_17:55065091-55074421:+|nuORF;nc|ENSG00000121064|Q9HB40-2|SCPEP1	40.77816245573522	0.5419747034533848	6				NaN	NaN	0	NaN	7812	3323	11130
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11155	30.207	NaN	129440	30	0	19916	0.205	+			8196	EAAVAIKAM	9	111	452.25164758389053	902.4887422345811	2	452.251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EAAVAIKAM_	ENSG00000132507|ENST00000336458|EIF5A;ENSG00000253626|ENST00000520547|EIF5AL1;nc|ENSG00000132507|P63241-2|EIF5A	161.89823264540465	0.004149850016316161	6				NaN	NaN	0	NaN	7827	3326	11154
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11156	30.211	NaN	200980	30	0	131910	0.106	+			40743	SVCVLDLRK	9	106	363.87375574529176	1088.5994378360754	3	363.874267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SVC(Carbamidomethyl (C))VLDLRK_	ENSG00000101849|ENST00000645353|TBL1X;ENSG00000177565|ENST00000457928|TBL1XR1;nc|ENSG00000101849|O60907-2|TBL1X;TBL1X|p.G568S|1|0.45|ENSG00000101849|chrX:9714998-9714998|G/A|missense_variant	65.15724298150197	0.17062369902793603	6				NaN	NaN	0	NaN	7828	3326	11154
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11157	30.213	NaN	47161	30	0	19878	0.106				-1	 	0	76	414.25221535048155	826.4898777677631	2	414.2527160644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7829	3326	11154
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11158	30.215	NaN	90177	30	0	21742	0.106				-1	 	0	97	572.3395975164741	1142.664642099748	2	572.340576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7830	3326	11154
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11159	30.216	NaN	29137	30	0	3755.5	0.106				-1	 	0	87	523.2974216942798	1044.5802904553595	2	523.2982788085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7831	3326	11154
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11160	30.218	NaN	13884	30	0	3071.9	0.106			+	-1	SVNMPVVGI	9	83	466.24856289726506	930.4825728613301	2	466.2491455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_SVNM(Oxidation (M))PVVGI_	REV__ENSG00000157211|ENST00000530059|CDCP2	47.657333605630114	0.33044192980041115	6				NaN	NaN	0	NaN	7832	3326	11154
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11161	30.22	NaN	17026	30	0	2460.7	0.036			+	38038	SPPSSRKSVM	10	76	538.2816964754951	1074.54884001779	2	538.2820434570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SPPSSRKSVM_	REV__ENST00000521506.1_1_5:171682090-171682429:-|nuORF	42.86426827375447	0.522752283233888	6				NaN	NaN	0	NaN	7833	3326	11154
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11179	30.254	NaN	99270	30	0	18087	0.193				-1	 	0	110	461.7344737279377	921.4543945226754	2	461.73480224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7848	3329	11178
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11180	30.258	NaN	46552	30	0	10718	0.106	+			27008	LYQRAFQHL	9	93	392.54861419905114	1174.6240131973534	3	392.54876708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LYQRAFQHL_	ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC;PRKDC|p.K3681Nfs*6|1|0.32|ENSG00000253729|chr8:47785174-47785177|TTCT/-|frameshift_variant;PRKDC|p.M3670*|1|0.5|ENSG00000253729|chr8:47785212-47785212|T/-|frameshift_variant;PRKDC|p.M3846Cfs*12|1|0.13|ENSG00000253729|chr8:47779047-47779047|T/-|frameshift_variant;PRKDC|p.M4020Cfs*2|1|0.31|ENSG00000253729|chr8:47776968-47776968|T/-|frameshift_variant;PRKDC|p.N3605Kfs*3|1|0.22|ENSG00000253729|chr8:47788993-47788994|-/T|frameshift_variant;PRKDC|p.N4037Ifs*15|1|0.17|ENSG00000253729|chr8:47776916-47776916|T/-|frameshift_variant;PRKDC|p.S3402Ifs*16|1|0.04|ENSG00000253729|chr8:47799302-47799303|-/AAACCGTGAGTTAGAGGAGGTAA|frameshift_variant;PRKDC|p.S4099Qfs*6|1|0.25|ENSG00000253729|chr8:47774265-47774265|A/-|frameshift_variant;PRKDC|p.W3401Cfs*4|1|0.01|ENSG00000253729|chr8:47799304-47799305|-/AATGAATA|frameshift_variant	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	7849	3329	11178
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11181	30.26	NaN	21827	30	0	3911.1	0.106	+			14684	GTIGDMMQK	9	87	490.72970554717875	979.4448581611575	2	490.7304382324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTIGDMMQK_	ENSG00000107874|ENST00000369937|CUEDC2;ENST00000477994.1_1_10:104183924-104192326:-|nuORF	158.07458414430337	0.004987072822166904	6				NaN	NaN	0	NaN	7850	3329	11178
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11182	30.261	NaN	40013	30	0	5035.1	0.106				-1	 	0	91	563.2922725627568	1124.5699921923135	2	563.2931518554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7851	3329	11178
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11183	30.263	NaN	64435	30	0	13055	0.106				-1	 	0	111	447.2449620388077	892.4753711444155	2	447.2453308105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7852	3329	11178
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11184	30.265	NaN	21736	30	0	3774.4	0.106	+			10982	FEEKRLVFL	9	83	394.22878373008876	1179.6645217904663	3	394.2287902832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FEEKRLVFL_	ENSG00000124507|ENST00000244458|PACSIN1;PACSIN1|p.A334Rfs*2|1|0.39|ENSG00000124507|chr6:34530547-34530547|G/-|frameshift_variant	58.22992032128504	0.22837015374068087	6				NaN	NaN	0	NaN	7853	3329	11178
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11185	30.267	NaN	12775	30	0	2415.6	0.034	+			48260	VTDGFSSLK	9	74	477.25010819881163	952.4856634644233	2	477.2503356933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VTDGFSSLK_	ENSG00000110245|ENST00000227667|APOC3	109.47833844074708	0.029530294723441826	6				NaN	NaN	0	NaN	7854	3329	11178
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11203	30.303	NaN	213770	30	0	31232	0.156	+			1032	AEKLGGSAVI	10	85	472.77365844313914	943.5327639530783	2	472.7737731933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEKLGGSAVI_	ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65622809-65623088:-|nuORF	92.23892857375223	0.11825556496531454	6				NaN	NaN	0	NaN	7869	3332	11202
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11204	30.306	NaN	24296	30	0	2946.8	0.106	+			6005	AVMDGNVITAK	11	97	559.7969062023707	1117.5792594715413	2	559.7979125976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVMDGNVITAK_	ENSG00000103316|ENST00000572914|CRYM;ENST00000571666.1_1_16:21273345-21289551:-|nuORF	69.84614183874652	0.23702237930179615	6				NaN	NaN	0	NaN	7870	3332	11202
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11205	30.308	NaN	16067	30	0	2538.6	0.106	+			40906	SVFNKTLLK	9	86	525.3199303825792	1048.6253078319583	2	525.320556640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVFNKTLLK_	ENSG00000121316|ENST00000240617|PLBD1	91.26522074875469	0.06129826844580791	6				NaN	NaN	0	NaN	7871	3332	11202
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11206	30.31	NaN	19789	30	0	2055.5	0.106	+			10807	FALNVALNAG	10	82	495.27507849355385	988.5356040539077	2	495.77691650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FALNVALNAG_	tr|U7T256|U7T256_FUSNUReplicativeDNAhelicaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00477PE=3SV=1	49.44154591367651	0.46214596422418036	6				NaN	NaN	0	NaN	7872	3332	11202
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11207	30.312	NaN	5111.1	30	0	565.84	0.106	+			27241	MENEMRTQL	9	83	576.2618440874138	1150.5091352416275	2	576.2630004882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MENEMRTQL_	ENSG00000132305|ENST00000410111|IMMT;nc|ENSG00000132305|Q16891-2|IMMT;nc|ENSG00000132305|Q16891-3|IMMT;nc|ENSG00000132305|Q16891-4|IMMT	102.0615471778698	0.03709830720253279	6				NaN	NaN	0	NaN	7873	3332	11202
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11208	30.313	NaN	8300.8	30	0	1624.5	0.106	+			8785	EEINQQSQL	9	78	544.7639261608434	1087.5132993884868	2	544.7648315429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EEINQQSQL_	ENSG00000170759|ENST00000302418|KIF5B;KIF5B|p.M622Wfs*8|1|0.15|ENSG00000170759|chr10:32022898-32022898|T/-|frameshift_variant	102.0615471778698	0.03709830720253279	6				NaN	NaN	0	NaN	7874	3332	11202
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11209	30.315	NaN	9370.5	30	0	3087.6	0.03				-1	 	0	55	336.2269923793595	670.439431825519	2	336.2274169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7875	3332	11202
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11227	30.353	NaN	17941	30	0	3175.7	0.214	+			861	AEGTVVMKL	9	90	482.2612603577139	962.5079677822279	2	482.26220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_AEGTVVM(Oxidation (M))KL_	ENSG00000141013|ENST00000268699|GAS8;ENST00000540721.5_1_16:90089090-90108732:+|nuORF;ENST00000565062.5_1_16:90097706-90103159:+|nuORF;nc|ENSG00000141013|O95995-2|GAS8	82.24051045832904	0.08786059719216216	6				NaN	NaN	0	NaN	7890	3335	11226
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11228	30.356	NaN	17732	30	0	5853	0.106				-1	 	0	78	430.2654099596015	858.5162669860031	2	430.265869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7891	3335	11226
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11229	30.358	NaN	19973	30	0	2436.1	0.106	+			27079	MAIFWTTI	8	73	499.7533988110698	997.4922446889396	2	499.7565612792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))AIFWTTI_	ENSG00000070915|ENST00000563236|SLC12A3;nc|ENSG00000070915|P55017-2|SLC12A3;nc|ENSG00000070915|P55017-3|SLC12A3	83.28718786952967	0.2977916691876266	6				NaN	NaN	0	NaN	7892	3335	11226
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11230	30.36	NaN	37602	30	0	10203	0.106	+			39965	STMGYMMAK	9	84	510.2202821852094	1018.4260114372188	2	510.2216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STMGYMMAK_	ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;ENST00000518337.1_1_8:74128289-74128592:-|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P	180.92599232761785	0.0012030822705978085	6				NaN	NaN	0	NaN	7893	3335	11226
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11231	30.362	NaN	12126	30	0	960.9	0.106	+			36239	SEMKLSVNA	9	81	489.74898333096405	977.4834137287281	2	489.7496032714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SEMKLSVNA_	ENSG00000241553|ENST00000397261|ARPC4;ENST00000440787.5_1_3:9845376-9847896:+|nuORF;ENST00000467289.5_1_3:9834805-9845712:+|nuORF;nc|ENSG00000241553|P59998-3|ARPC4;nc|ENSG00000241553|P59998-4|ARPC4	93.5975768576971	0.05472259948179787	6				NaN	NaN	0	NaN	7894	3335	11226
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11232	30.364	NaN	10046	30	0	1435.9	0.038	+			36768	SHYYTTLVTL	10	73	399.87681811689345	1196.6086249508803	3	399.87689208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SHYYTTLVTL_	ENSG00000171840|ENST00000305108|NINJ2	32.75053402867276	0.6123771875927935	6				NaN	NaN	0	NaN	7895	3335	11226
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11233	30.364	NaN	18916	30	0	1871.1	0.141	+			28097	NAFKEITTM	9	76	535.7623702673955	1069.5101876015908	2	535.7630004882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_NAFKEITTM(Oxidation (M))_	ENSG00000137947|ENST00000370500|GTF2B;ENST00000486078.1_1_1:89325774-89329699:-|nuORF;ENST00000494819.5_1_1:89324456-89357188:-|nuORF	185.54966270084765	0.0007389233275946833	6				NaN	NaN	0	NaN	7896	3335	11226
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11251	30.402	NaN	196720	30	0	22200	0.202			+	22135	KSPKEQLEQ	9	110	543.7939431064032	1085.5733332796062	2	543.7954711914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSPKEQLEQ_	REV__ENSG00000177511|ENST00000324000|ST8SIA3;REV__ST8SIA3|p.F264Lfs*8|1|0.28|ENSG00000177511|chr18:57357397-57357397|T/-|frameshift_variant	93.1432384553994	0.056003526918089595	6				NaN	NaN	0	NaN	7911	3338	11250
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11252	30.406	NaN	15179	30	0	4180.6	0.106	+			9638	ELRPLLYSL	9	84	368.554564074297	1102.641862823091	3	368.55450439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ELRPLLYSL_	ENST00000596245.1_1_19:8590207-8591472:-|nuORF	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	7912	3338	11250
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11253	30.408	NaN	8395.3	30	0	1825.6	0.106			+	18329	IPVEEAAARY	10	73	559.7969062023707	1117.5792594715413	2	559.2984008789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IPVEEAAARY_	REV__ENSG00000083123|ENST00000320393|BCKDHB	54.776311868738084	0.41334902933431344	6				NaN	NaN	0	NaN	7913	3338	11250
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11254	30.409	NaN	12621	30	0	1532.4	0.106	+			12536	GEFSVLES	8	71	434.2084573246253	866.4023617160506	2	434.2086181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEFSVLES_	ENSG00000137501|ENST00000359152|SYTL2;ENST00000438197.2_1_11:85444955-85468786:-|nuORF;nc|ENSG00000137501|Q9HCH5-13|SYTL2;nc|ENSG00000137501|Q9HCH5-14|SYTL2;nc|ENSG00000137501|Q9HCH5-15|SYTL2;nc|ENSG00000137501|Q9HCH5-6|SYTL2;nc|ENSG00000137501|Q9HCH5|SYTL2;SYTL2|p.Q663Tfs*35|1|0.14|ENSG00000137501|chr11:85709344-85709345|-/T|frameshift_variant	33.51558372728122	0.7005509609380386	6				NaN	NaN	0	NaN	7914	3338	11250
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11255	30.411	NaN	20757	30	0	5676.3	0.106	+			14524	GTDLFPYEVS	10	73	376.51344024316006	1126.5184913296803	3	376.5137939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTDLFPYEVS_	ENST00000583137.1_1_18:9708365-9723638:+|nuORF	27.882242232435846	0.6521336255503853	6				NaN	NaN	0	NaN	7915	3338	11250
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11256	30.413	NaN	10299	30	0	1020.8	0.106			+	9252	EGVLMIILY	9	68	525.8004453853598	1049.5863378375195	2	525.8010864257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EGVLMIILY_	REV__ENSG00000024048|ENST00000372901|UBR2;REV__nc|ENSG00000024048|Q8IWV8-3|UBR2;REV__nc|ENSG00000024048|Q8IWV8|UBR2;REV__UBR2|p.N1139Tfs*65|1|0.07|ENSG00000024048|chr6:42659824-42659824|A/-|frameshift_variant	50.0245360154114	0.3026755932229825	6				NaN	NaN	0	NaN	7916	3338	11250
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11257	30.415	NaN	6356.3	30	0	844.18	0.036	+			17306	IAEEQQRIL	9	75	550.3081642622909	1098.6017755913817	2	550.3094482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IAEEQQRIL_	ENSG00000092964|ENST00000521913|DPYSL2;ENST00000521983.1_1_8:26484742-26500445:+|nuORF;nc|ENSG00000092964|Q16555-2|DPYSL2;nc|ENSG00000092964|Q16555|DPYSL2	63.53385203322761	0.18415635464017938	6				NaN	NaN	0	NaN	7917	3338	11250
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11275	30.451	NaN	40131	30	0	11401	0.214	+			44739	TTLTSQYIK	9	80	527.7918941811593	1053.5692354291184	2	527.7926635742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTLTSQYIK_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	158.07458414430337	0.004987072822166904	6				NaN	NaN	0	NaN	7932	3341	11274
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11276	30.455	NaN	42062	30	0	7348.1	0.106	+			7251	DALRCVNNY	9	92	562.760527185062	1123.5065014369238	2	562.7616577148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_DALRC(Carbamidomethyl (C))VNNY_	ENSG00000143155|ENST00000367833|TIPRL;nc|ENSG00000143155|O75663-2|TIPRL;TIPRL|p.F156Lfs*13|1|0.33|ENSG00000143155|chr1:168191448-168191448|T/-|frameshift_variant	90.60085204095205	0.06317133949006545	6				NaN	NaN	0	NaN	7933	3341	11274
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11277	30.457	NaN	16896	30	0	1754.8	0.106	+			43464	TGNPTVIKM	9	87	480.761900315828	959.509247698456	2	480.7626037597656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TGNPTVIKM_	ENSG00000140575|ENST00000268182|IQGAP1;ENSG00000145703|ENST00000274364|IQGAP2;ENST00000512383.1_1_5:75964652-75969784:+|nuORF;IQGAP1|p.S1529Afs*10|1|0.15|ENSG00000140575|chr15:90492665-90492665|A/-|frameshift_variant;IQGAP2|p.Q1499Rfs*15|1|0.05|ENSG00000145703|chr5:76701201-76701202|-/CCGAG|frameshift_variant;nc|ENSG00000145703|Q13576-2|IQGAP2;nc|ENSG00000145703|Q13576-3|IQGAP2	99.01295224348159	0.040209060045561164	6				NaN	NaN	0	NaN	7934	3341	11274
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11278	30.459	NaN	12825	30	0	2705	0.106	+			40561	SVAECQLMK	9	87	504.7460083177167	1007.4774637022334	2	504.74639892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVAECQLMK_	ENSG00000105221|ENST00000392038|AKT2;ENST00000391844.8_1_19:40739781-40791100:-|nuORF;ENST00000537834.5_1_19:40745726-40771198:-|nuORF;nc|ENSG00000105221|P31751-2|AKT2	80.45461616416974	0.09558281504443908	6				NaN	NaN	0	NaN	7935	3341	11274
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11279	30.46	NaN	9139.3	30	0	1154.2	0.106			+	30044	PPTVPPAVST	10	77	483.26860124138176	964.5226495495635	2	484.2763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PPTVPPAVST_	REV__ENST00000476266.5_1_19:40748442-40748610:-|nuORF;REV__ENST00000578975.1_1_19:40748439-40748610:-|nuORF	26.063383197487333	0.6669871633831898	6				NaN	NaN	0	NaN	7936	3341	11274
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11280	30.462	NaN	9459	30	0	1051.1	0.032			+	48721	VTTVGPQL	8	70	407.736776566828	813.459000200456	2	407.7369384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTTVGPQL_	REV__ENSG00000184985|ENST00000507866|SORCS2	82.30502934623384	0.30436709589983096	6				NaN	NaN	0	NaN	7937	3341	11274
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11281	30.463	NaN	8002.2	30	0	1039.2	0.14	+			28221	NAVKLDDTY	9	83	519.7576864548099	1037.5008199764197	2	519.759033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NAVKLDDTY_	DNAJC7|p.N369Mfs*6|3|0.26|ENSG00000168259|chr17:41982380-41982380|T/-|frameshift_variant;ENSG00000168259|ENST00000457167|DNAJC7;nc|ENSG00000168259|Q99615-2|DNAJC7	69.6276240434122	0.14239879520340665	6				NaN	NaN	0	NaN	7938	3341	11274
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11299	30.499	NaN	59410	30	0	24767	0.214				-1	 	0	74	451.2889058205413	900.5632587078826	2	451.2892150878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7953	3344	11298
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11300	30.502	NaN	36148	30	0	13235	0.106	+			50708	YEERVQAVV	9	77	546.7874896863215	1091.5604264394428	2	546.7888793945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YEERVQAVV_	ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1;SPTBN1|p.K503Rfs*24|1|0.06|ENSG00000115306|chr2:54626095-54626095|G/-|frameshift_variant	81.52500206392136	0.09095445986635249	6				NaN	NaN	0	NaN	7954	3344	11298
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11301	30.504	NaN	15786	30	0	4016.4	0.106	+			23379	LAADCAHEL	9	84	471.7206032314553	941.4266535297106	2	471.7207946777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LAADCAHEL_	ENSG00000157379|ENST00000288111|DHRS1;ENST00000558340.1_1_14:24760067-24761569:-|nuORF;ENST00000561137.5_1_14:24760413-24761527:-|nuORF;ENST00000561273.5_1_14:24760714-24761569:-|nuORF	68.78682469695295	0.14603441672067394	6				NaN	NaN	0	NaN	7955	3344	11298
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11302	30.506	NaN	12635	30	0	3419.1	0.106	+			30507	QAFGSGNNSY	10	73	522.7220037698812	1043.4294546065623	2	522.7227783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QAFGSGNNSY_	ENSG00000120948|ENST00000240185|TARDBP;nc|ENSG00000120948|Q13148-4|TARDBP	95.4829727501206	0.09968275784893506	6				NaN	NaN	0	NaN	7956	3344	11298
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11303	30.508	NaN	17201	30	0	5722.4	0.106	+			41038	SVIDRKDLIIK	11	82	433.9369617188837	1298.7890557568512	3	433.9377746582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVIDRKDLIIK_	ENSG00000170085|ENST00000429602|SIMC1;nc|ENSG00000170085|Q8NDZ2-3|SIMC1;nc|ENSG00000170085|Q8NDZ2-4|SIMC1;nc|ENSG00000170085|Q8NDZ2|SIMC1	55.08391021199286	0.3673379875553588	6				NaN	NaN	0	NaN	7957	3344	11298
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11304	30.51	NaN	21400	30	0	3357.4	0.106			+	-1	VSCSSKGQSA	10	81	505.73177257457485	1009.4489922159497	2	505.73248291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_VSC(Carbamidomethyl (C))SSKGQSA_	REV__ENSG00000106615|ENST00000262187|RHEB;REV__ENST00000448647.2_1_10:46914432-46914702:+|nuORF	33.921630207806714	0.6028135429846169	6				NaN	NaN	0	NaN	7958	3344	11298
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11305	30.511	NaN	15929	30	0	2266.9	0.036				-1	MPLAKDGLAM	10	78	531.7694556109426	1061.524358288685	2	531.7704467773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_MPLAKDGLAM(Oxidation (M))_	COL8A1|p.H599Mfs*24|2|0.46|ENSG00000144810|chr3:99795690-99795690|C/-|frameshift_variant;COL8A1|p.I509Lfs*24|1|0.12|ENSG00000144810|chr3:99795422-99795422|C/-|frameshift_variant;COL8A1|p.P576Lfs*20|1|0.09|ENSG00000144810|chr3:99795624-99795624|C/-|frameshift_variant;ENSG00000144810|ENST00000652472|COL8A1	60.11826168202944	0.36476464221954025	6				NaN	NaN	0	NaN	7959	3344	11298
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11318	30.538	NaN	39257	30	0	5205.2	0.214	+			5667	AVDQIAFQK	9	101	510.2791332582359	1018.5437135832718	2	510.27972412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVDQIAFQK_	ENSG00000144554|ENST00000675286|FANCD2;FANCD2|p.I1249Nfs*2|1|0.48|ENSG00000144554|chr3:10090346-10090347|-/A|frameshift_variant;FANCD2|p.N890Ifs*14|1|0.36|ENSG00000144554|chr3:10073312-10073312|A/-|frameshift_variant;nc|ENSG00000144554|Q9BXW9-1|FANCD2;nc|ENSG00000144554|Q9BXW9-3|FANCD2;nc|ENSG00000144554|Q9BXW9-4|FANCD2	92.23892857375223	0.05855307001735979	6				NaN	NaN	0	NaN	7969	3347	11317
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11319	30.542	NaN	16890	30	0	2577.3	0.106	+			43205	TEVIHTGTL	9	79	485.76317184905645	969.5117907649129	2	485.7637634277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEVIHTGTL_	ENSG00000182986|ENST00000682928|ZNF320;ENSG00000189190|ENST00000692063|ZNF600;ENSG00000203326|ENST00000474037|ZNF525;ENSG00000204604|ENST00000595646|ZNF468;ENSG00000213020|ENST00000652185|ZNF611;ENSG00000213793|ENST00000638862|ZNF888;ENSG00000213799|ENST00000458035|ZNF845;nc|ENSG00000189190|Q6ZNG1|ZNF600;nc|ENSG00000204604|Q5VIY5-2|ZNF468;nc|ENSG00000213020|Q8N823-2|ZNF611;nc|ENSG00000293246|Q8N8H1|ZNF321P;ZNF468|p.K232Nfs*4|1|0.3|ENSG00000204604|chr19:52841598-52841598|T/-|frameshift_variant;ZNF525|p.S149Yfs*51|1|0.05|ENSG00000203326|chr19:53381024-53381025|-/ATTGC|frameshift_variant;ZNF611|p.F463Lfs*36|1|0.09|ENSG00000213020|chr19:52705666-52705666|A/-|frameshift_variant;ZNF611|p.K221Nfs*6|1|0.35|ENSG00000213020|chr19:52706392-52706392|T/-|frameshift_variant	125.81401957644128	0.01768009863045738	6				NaN	NaN	0	NaN	7970	3347	11317
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11320	30.543	NaN	9991.6	30	0	3591	0.106	+			43303	TFTKDEESY	9	75	560.2456942138065	1118.4768354944129	2	560.246826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TFTKDEESY_	ENSG00000078081|ENST00000265598|LAMP3	35.61828744233558	0.47037581924408073	6				NaN	NaN	0	NaN	7971	3347	11317
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11321	30.545	NaN	7895	30	0	638.18	0.106			+	23660	LARWPGTE	8	71	465.2449748554461	928.4753967776923	2	465.2455749511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LARWPGTE_	REV__ENST00000564063.1_1_1:108742725-108743325:+|nuORF	60.29395666154354	0.49887135096048313	6				NaN	NaN	0	NaN	7972	3347	11317
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11322	30.547	NaN	9781	30	0	1013.4	0.106	+			43242	TEVRVANEL	9	80	515.7809340013348	1029.5473150694695	2	515.7813110351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TEVRVANEL_	ENSG00000122490|ENST00000397778|SLC66A2;ENST00000351365.7_1_18:77663978-77709700:-|nuORF;ENST00000466449.5_1_18:77690306-77703530:-|nuORF;nc|ENSG00000122490|Q8N2U9-2|SLC66A2;nc|ENSG00000122490|Q8N2U9-3|SLC66A2	91.26522074875469	0.06129826844580791	6				NaN	NaN	0	NaN	7973	3347	11317
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11323	30.549	NaN	4635	30	0	260.83	0.106	+			19934	KEFGDDKVQL	10	74	589.8055172206539	1177.5964815081077	2	589.8065185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KEFGDDKVQL_	ENSG00000111653|ENST00000341550|ING4;ENST00000484795.5_1_12:6761826-6762560:-|nuORF;ENST00000488381.5_1_12:6760363-6764813:-|nuORF;nc|ENSG00000111653|Q9UNL4-3|ING4;nc|ENSG00000111653|Q9UNL4-4|ING4;nc|ENSG00000111653|Q9UNL4-5|ING4;nc|ENSG00000111653|Q9UNL4-6|ING4;nc|ENSG00000111653|Q9UNL4-7|ING4;nc|ENSG00000111653|Q9UNL4-8|ING4;nc|ENSG00000111653|Q9UNL4|ING4	98.75417337143367	0.08139658455556813	6				NaN	NaN	0	NaN	7974	3347	11317
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11324	30.551	NaN	4692.1	30	0	868.8	0.034				-1	 	0	68	468.71350882797583	935.4124647227517	2	468.71392822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7975	3347	11317
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11342	30.588	NaN	47982	30	0	7762.5	0.214	+			23437	LADDSVRSL	9	92	488.2585774986112	974.5026020640224	2	488.25872802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LADDSVRSL_	ENSG00000138078|ENST00000409411|PREPL;nc|ENSG00000138078|Q4J6C6-2|PREPL;nc|ENSG00000138078|Q4J6C6|PREPL	134.7655990226056	0.012935733000282069	6				NaN	NaN	0	NaN	7990	3350	11341
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11343	30.592	NaN	14674	30	0	1788.8	0.106				-1	 	0	76	458.26030765284406	914.5060623724881	2	458.26055908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7991	3350	11341
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11344	30.594	NaN	9098.3	30	0	1545.9	0.106	+			14519	GTDEPIFGK	9	74	482.24121201502663	962.4678710968533	2	482.2419128417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTDEPIFGK_	ENSG00000039123|ENST00000230640|MTREX;ENST00000503165.5_1_5:54603841-54625205:+|nuORF;ENST00000504388.5_1_5:54603829-54620403:+|nuORF	69.6276240434122	0.14239879520340665	6				NaN	NaN	0	NaN	7992	3350	11341
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11345	30.596	NaN	6595.4	30	0	807.22	0.106	+			36158	SEKVHVNLL	9	83	519.7998449396952	1037.5851369461902	2	519.8007202148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SEKVHVNLL_	ENSG00000080546|ENST00000436639|SESN1;ENSG00000130766|ENST00000253063|SESN2;ENSG00000149212|ENST00000536441|SESN3;nc|ENSG00000080546|Q9Y6P5-3|SESN1;nc|ENSG00000080546|Q9Y6P5|SESN1;nc|ENSG00000149212|P58005-4|SESN3	75.04331003522576	0.118981335847003	6				NaN	NaN	0	NaN	7993	3350	11341
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11346	30.597	NaN	7385.8	30	0	3147	0.106			+	47111	VLMGTRKGLL	10	52	363.22627375320917	1086.6569918598275	3	363.22662353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VLMGTRKGLL_	REV__ENST00000475124.1_1_3:53892285-53892672:+|nuORF	22.579656572578934	0.6954366826851017	6				NaN	NaN	0	NaN	7994	3350	11341
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11347	30.599	NaN	18754	30	0	2202.8	0.034				-1	 	0	98	477.29197269653247	952.569392459865	2	477.2933044433594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7995	3350	11341
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11348	30.6	NaN	14150	30	0	3484.1	0.143				-1	 	0	70	370.8692150333601	1109.5858157002804	3	370.86944580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7996	3350	11341
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11367	30.639	NaN	46326	30	0	29069	0.214				-1	 	0	77	499.30507179226555	996.5955906513311	2	499.30572509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8012	3353	11366
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11368	30.643	NaN	40976	30	0	7258	0.106	+			5429	ATYILEAGK	9	85	483.26860124138176	964.5226495495635	2	483.2684631347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATYILEAGK_	ENSG00000148444|ENST00000376836|COMMD3;ENST00000463409.6_1_10:22605382-22615407:+|nuORF;ENST00000470045.1_1_10:22605346-22607030:+|nuORF;ENST00000472673.5_1_10:22606461-22607284:+|nuORF;ENST00000479958.6_1_10:22605346-22607121:+|nuORF;ENST00000483684.1_1_10:22606823-22607748:+|nuORF;ENST00000496071.5_1_10:22605382-22607284:+|nuORF;ENST00000602574.5_1_10:22605346-22607236:+|nuORF	131.115847015877	0.014647977962315902	6				NaN	NaN	0	NaN	8013	3353	11366
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11369	30.645	NaN	16588	30	0	2463.4	0.106			+	20768	KHLCFVSL	8	95	473.7631312718438	945.5117096104876	2	473.763427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KHLCFVSL_	REV__ENSG00000168398|ENST00000554311|BDKRB2;REV__nc|ENSG00000168398|P30411-2|BDKRB2	68.484700416344	0.4195245774506064	6				NaN	NaN	0	NaN	8014	3353	11366
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11370	30.647	NaN	23744	30	0	3537.6	0.106	+			30393	PVQPSPGGGER	11	83	540.7746372072933	1079.5347214813864	2	540.7755737304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PVQPSPGGGER_	ENST00000502773.5_1_4:157892054-157892213:-|nuORF	101.45984612302182	0.05766908690822908	6				NaN	NaN	0	NaN	8015	3353	11366
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11371	30.648	NaN	8768.3	30	0	764.34	0.106	+			27663	MPSRELASM	9	82	511.2425351702719	1020.4705174073438	2	511.2438659667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MPSRELASM_	ENSG00000164292|ENST00000379982|RHOBTB3;RHOBTB3|p.K539Rfs*53|1|0.25|ENSG00000164292|chr5:95783952-95783952|A/-|frameshift_variant	56.43379154798735	0.2433427591689151	6				NaN	NaN	0	NaN	8016	3353	11366
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11372	30.65	NaN	7950.9	30	0	846.43	0.035	+			12119	GAFYKGFVK	9	75	508.78104221401975	1015.5475314948395	2	508.7815856933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GAFYKGFVK_	ENSG00000129245|ENST00000250113|FXR2;FXR2|p.P540Qfs*32|3|0.45|ENSG00000129245|chr17:7592804-7592804|G/-|frameshift_variant	51.33545320467046	0.2872990594074956	6				NaN	NaN	0	NaN	8017	3353	11366
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11373	30.651	NaN	9891	30	0	1088.7	0.141				-1	SLMHSFILK	9	80	546.2990110551217	1090.5834691770433	2	546.3001708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_SLM(Oxidation (M))HSFILK_	ENSG00000125971|ENST00000357156|DYNLRB1;ENST00000480759.1_1_20:33117938-33128425:+|nuORF	77.31757898189308	0.1091473830098891	6				NaN	NaN	0	NaN	8018	3353	11366
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11391	30.69	NaN	54705	30	0	4967.2	0.214				-1	 	0	106	531.8002819052864	1061.5860108773727	2	531.8010864257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8033	3356	11390
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11392	30.694	NaN	15779	30	0	1277.4	0.106	+			17388	IANVDLVLS	9	77	472.2762676418573	NaN	0	472.27630615234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IANVDLVLS_	ENSG00000168026|ENST00000683103|TTC21A;nc|ENSG00000168026|Q8NDW8-5|TTC21A;nc|ENSG00000168026|Q8NDW8-6|TTC21A;nc|ENSG00000168026|Q8NDW8-7|TTC21A;nc|ENSG00000168026|Q8NDW8|TTC21A	66.42927471994793	0.121898005645852	6				NaN	NaN	0	NaN	8034	3356	11390
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11393	30.696	NaN	27353	30	0	4044.4	0.106	+			37115	SISVLPSSK	9	99	459.267664556896	916.5207761805921	2	459.2682800292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SISVLPSSK_	ENST00000254351.8_1_2:20400819-20401029:-|nuORF	104.74654710444128	0.034358562718640136	6				NaN	NaN	0	NaN	8035	3356	11390
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11394	30.698	NaN	54613	30	0	7960.3	0.106			+	-1	PCNMPKLAL	9	103	501.75824894645496	1001.5019449597099	2	501.758544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_PCNM(Oxidation (M))PKLAL_	REV__ENSG00000143374|ENST00000369064|TARS2;REV__nc|ENSG00000143374|Q9BW92-2|TARS2	85.35947970620816	0.07794846947388434	6				NaN	NaN	0	NaN	8036	3356	11390
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11395	30.7	NaN	29137	30	0	3210	0.106				-1	 	0	89	507.7999853932777	1013.5854178533555	2	507.8006286621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8037	3356	11390
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11396	30.701	NaN	13051	30	0	2412.6	0.035	+			51335	YSMPSTHAM	9	83	512.7139517542911	1023.4133505753822	2	512.7151489257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YSMPSTHAM_	ENSG00000126821|ENST00000247225|SGPP1;SGPP1|p.I357Lfs*3|2|0.18|ENSG00000126821|chr14:63686363-63686363|G/-|frameshift_variant	90.77665401227738	0.06267569666681755	6				NaN	NaN	0	NaN	8038	3356	11390
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11397	30.702	NaN	9298.9	30	0	1136.7	0.14	+			50444	YADPVNAHY	9	78	525.237737458425	1048.46092198365	2	525.2384643554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YADPVNAHY_	ENSG00000119314|ENST00000374257|PTBP3;nc|ENSG00000119314|O95758-1|PTBP3;nc|ENSG00000119314|O95758-2|PTBP3;nc|ENSG00000119314|O95758-4|PTBP3;nc|ENSG00000119314|O95758-5|PTBP3;nc|ENSG00000119314|O95758-7|PTBP3;nc|ENSG00000119314|O95758|PTBP3	79.71258880314673	0.09879134589249085	6				NaN	NaN	0	NaN	8039	3356	11390
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11415	30.741	NaN	34365	30	0	14636	0.191				-1	 	0	79	487.25978565240234	972.5050183716047	2	487.2601623535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8054	3359	11414
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11416	30.744	NaN	32310	30	0	5960.3	0.106	+			24192	LEQKLATL	8	87	458.2784586319513	914.5423643307026	2	458.27899169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LEQKLATL_	ENSG00000163681|ENST00000671191|SLMAP;ENST00000467901.1_1_3:57743378-57875870:+|nuORF;nc|ENSG00000163681|Q14BN4-2|SLMAP;nc|ENSG00000163681|Q14BN4-3|SLMAP;nc|ENSG00000163681|Q14BN4-6|SLMAP;nc|ENSG00000163681|Q14BN4-7|SLMAP;nc|ENSG00000163681|Q14BN4|SLMAP	107.00750918261382	0.24681273948614665	6				NaN	NaN	0	NaN	8055	3359	11414
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11417	30.746	NaN	25134	30	0	2178.3	0.106				-1	 	0	93	552.3076967441544	1102.6008405551088	2	552.3088989257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8056	3359	11414
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11418	30.748	NaN	8018.8	30	0	1804.7	0.106				-1	 	0	78	598.2897131579188	1194.5648733826374	2	598.2908325195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8057	3359	11414
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11419	30.749	NaN	26032	30	0	4308.7	0.106	+			13991	GSCSDFQFK	9	79	538.2284136928852	1074.4422744525702	2	538.229736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_GSC(Carbamidomethyl (C))SDFQFK_	ENSG00000124429|ENST00000262753|POF1B;nc|ENSG00000124429|Q8WVV4-1|POF1B	136.26810882979174	0.012230845423532208	6				NaN	NaN	0	NaN	8058	3359	11414
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11420	30.751	NaN	8393.3	30	0	1226.2	0.106	+			19388	KAMEGIFMK	9	74	527.7739232325218	1053.5332935318436	2	527.7755126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KAMEGIFMK_	ENSG00000132581|ENST00000247020|SDF2;ENST00000585749.5_1_17:26976009-26989084:-|nuORF	76.16968421966216	0.11411088698345859	6				NaN	NaN	0	NaN	8059	3359	11414
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11421	30.753	NaN	20454	30	0	10064	0.036				-1	 	0	58	354.20934714249927	1059.606212027698	3	354.2098083496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8060	3359	11414
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11439	30.791	NaN	41700	30	0	10352	0.214				-1	 	0	82	471.73714358143627	941.4597342296726	2	471.7373962402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8075	3362	11438
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11440	30.794	NaN	27479	30	0	4428.2	0.106	+			39918	STMAIIVNK	9	103	488.777683682476	975.540814431752	2	488.7781677246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STMAIIVNK_	ENSG00000082898|ENST00000401558|XPO1;ENST00000428210.5_1_2:61705957-61719950:-|nuORF;ENST00000461407.5_1_2:61712881-61715780:-|nuORF;ENST00000492182.5_1_2:61710065-61713073:-|nuORF	131.03138772384656	0.014687601201650916	6				NaN	NaN	0	NaN	8076	3362	11438
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11441	30.796	NaN	29310	30	0	3219.1	0.106	+			26852	LVVRFYRN	8	90	533.8113386218955	1065.608124310591	2	533.8123168945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LVVRFYRN_	ENSG00000183856|ENST00000361170|IQGAP3;IQGAP3|p.Q1205Sfs*31|1|0.4|ENSG00000183856|chr1:156534628-156534628|G/-|frameshift_variant	52.29916861842294	0.578018602984656	6				NaN	NaN	0	NaN	8077	3362	11438
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11442	30.798	NaN	15352	30	0	1625	0.106			+	32162	QSQLQLIEQ	9	77	543.7939431064032	1085.5733332796062	2	543.7954711914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QSQLQLIEQ_	REV__ENSG00000166578|ENST00000416617|IQCD	77.31757898189308	0.1091473830098891	6				NaN	NaN	0	NaN	8078	3362	11438
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11443	30.8	NaN	24564	30	0	7203.3	0.106			+	12311	GDERKLTL	8	92	466.26352522419165	930.5124975151833	2	466.263916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GDERKLTL_	REV__ENST00000300134.7_1_12:57504946-57505147:-|nuORF	110.11987700582712	0.24509564897437786	6				NaN	NaN	0	NaN	8079	3362	11438
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11444	30.802	NaN	8037.2	30	0	1825.7	0.033				-1	 	0	76	447.7732885153466	893.5320240974933	2	447.7737121582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8080	3362	11438
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11445	30.802	NaN	8474.5	30	0	2395.1	0.143	+			23205	KYDEFIHKI	9	77	398.21673704117984	1191.6283817237395	3	398.216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KYDEFIHKI_	ENSG00000129007|ENST00000467889|CALML4;ENST00000562767.2_3_15:68486355-68521975:-|nuORF;nc|ENSG00000129007|Q96GE6-2|CALML4;nc|ENSG00000129007|Q96GE6-3|CALML4;nc|ENSG00000129007|Q96GE6-4|CALML4;nc|ENSG00000129007|Q96GE6|CALML4	48.601550744091256	0.3193666407755445	6				NaN	NaN	0	NaN	8081	3362	11438
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11463	30.842	NaN	68945	30	0	34067	0.214	+			31340	QISEVVVVK	9	105	500.80503171925	999.5955105053	2	500.80535888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QISEVVVVK_	ENSG00000099622|ENST00000587896|CIRBP;nc|ENSG00000099622|Q14011-2|CIRBP;nc|ENSG00000099622|Q14011|CIRBP	71.87747018426188	0.13267044672804276	6				NaN	NaN	0	NaN	8096	3365	11462
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11464	30.845	NaN	68547	30	0	31947	0.106	+			13936	GRSHRAPQSGP	11	77	575.2971842788193	1148.5798156244384	2	575.298095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GRSHRAPQSGP_	ENSG00000122778|ENST00000422774|KIAA1549;KIAA1549|p.E1477Gfs*3|1|0.36|ENSG00000122778|chr7:138871280-138871281|-/G|frameshift_variant;KIAA1549|p.P1759Rfs*66|3|0.22|ENSG00000122778|chr7:138852241-138852241|G/-|frameshift_variant;nc|ENSG00000122778|Q9HCM3-2|KIAA1549;nc|ENSG00000122778|Q9HCM3-3|KIAA1549;nc|ENSG00000122778|Q9HCM3-4|KIAA1549	28.081489160057373	0.6952392775027776	6				NaN	NaN	0	NaN	8097	3365	11462
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11465	30.847	NaN	36711	30	0	24460	0.106	+			3975	ATATTEALPL	10	81	494.27091192920426	986.5272709252085	2	494.27130126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATATTEALPL_	ENSG00000041982|ENST00000350763|TNC;nc|ENSG00000041982|P24821-3|TNC	42.396135135203025	0.5270658956260207	6				NaN	NaN	0	NaN	8098	3365	11462
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11466	30.849	NaN	53215	30	0	13171	0.106	+			3957	ATATLHVL	8	81	413.24550944902353	NaN	0	413.24505615234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATATLHVL_	ENSG00000081818|ENST00000194152|PCDHB4;ENSG00000112852|ENST00000194155|PCDHB2;ENSG00000113205|ENST00000231130|PCDHB3;ENSG00000113209|ENST00000231134|PCDHB5;ENSG00000113211|ENST00000231136|PCDHB6;ENSG00000113212|ENST00000231137|PCDHB7;ENSG00000120322|ENST00000239444|PCDHB8;ENSG00000120327|ENST00000239449|PCDHB14;ENSG00000120328|ENST00000239450|PCDHB12;ENSG00000177839|ENST00000316105|PCDHB9;ENSG00000187372|ENST00000341948|PCDHB13;ENSG00000272674|ENST00000609684|PCDHB16;nc|ENSG00000120327|Q9Y5E9-2|PCDHB14;nc|ENSG00000120328|Q9Y5F1-2|PCDHB12;nc|ENSG00000290894|Q96TA0|PCDHB18P;PCDHB8|p.G781Wfs*9|1|0.43|ENSG00000120322|chr5:141180370-141180371|-/T|frameshift_variant	128.81572412613596	1.7418937515398478	6				NaN	NaN	0	NaN	8099	3365	11462
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11467	30.851	NaN	12434	30	0	4045.5	0.106	+			30902	QEKTIEEQL	9	78	559.2897339316311	1116.564914930062	2	559.290771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QEKTIEEQL_	nc|ENSG00000157654|Q9Y2D5-3|PALM2AKAP2;nc|ENSG00000157654|Q9Y2D5-5|PALM2AKAP2;nc|ENSG00000157654|Q9Y2D5-6|PALM2AKAP2;nc|ENSG00000157654|Q9Y2D5-7|PALM2AKAP2;nc|ENSG00000157654|Q9Y2D5|PALM2AKAP2	167.22876102047192	0.0032399547248545047	6				NaN	NaN	0	NaN	8100	3365	11462
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11468	30.853	NaN	7488.3	30	0	939.88	0.037	+			17255	HYDPTINKW	9	81	587.2872463095905	1172.559939685981	2	587.2880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HYDPTINKW_	ENC1|p.G499Vfs*26|1|0.12|ENSG00000171617|chr5:74634990-74634990|C/-|frameshift_variant;ENSG00000171617|ENST00000302351|ENC1;nc|ENSG00000171617|O14682-2|ENC1	139.97047562133406	0.010493916756945389	6				NaN	NaN	0	NaN	8101	3365	11462
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11469	30.854	NaN	10959	30	0	1418.2	0.14	+			42942	TEIQQQSAL	9	77	509.2630721328352	1016.5115913324704	2	509.26422119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TEIQQQSAL_	ENSG00000182934|ENST00000332118|SRPRA;ENST00000528744.5_1_11:126137442-126138699:-|nuORF;nc|ENSG00000182934|P08240-2|SRPRA	76.16968421966216	0.11411088698345859	6				NaN	NaN	0	NaN	8102	3365	11462
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11487	30.892	NaN	131070	30	0	46168	0.145				-1	 	0	78	413.2627105506166	824.5108681680332	2	413.2630615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8117	3368	11486
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11488	30.894	NaN	111910	30	0	30332	0.106			+	8035	DTVAAFPSR	9	90	482.2491435818738	962.4837342305476	2	482.24969482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DTVAAFPSR_	REV__CNKSR2|p.Y594Ifs*15|1|0.62|ENSG00000149970|chrX:21591137-21591138|-/A|frameshift_variant;REV__ENSG00000149970|ENST00000379510|CNKSR2;REV__nc|ENSG00000149970|Q8WXI2-2|CNKSR2;REV__nc|ENSG00000149970|Q8WXI2-4|CNKSR2;REV__nc|ENSG00000149970|Q8WXI2-5|CNKSR2	79.71258880314673	0.09879134589249085	6				NaN	NaN	0	NaN	8118	3368	11486
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11489	30.896	NaN	22216	30	0	3494.8	0.106	+			11914	FVAEQKVEY	9	82	556.7841742828932	1111.5537956325863	2	556.78515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FVAEQKVEY_	ENSG00000114867|ENST00000346169|EIF4G1;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;ENST00000460829.5_1_3:184046782-184052693:+|nuORF;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1	112.10723106719422	0.02684780151337622	6				NaN	NaN	0	NaN	8119	3368	11486
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11490	30.898	NaN	18802	30	0	1340.5	0.106	+			22893	KVMGILINR	9	98	522.322251673597	1042.6299504139938	2	522.3234252929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KVMGILINR_	ENSG00000105063|ENST00000412770|PPP6R1	72.2432373244024	0.13108886737667413	6				NaN	NaN	0	NaN	8120	3368	11486
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11491	30.9	NaN	12171	30	0	2362.4	0.106	+			24269	LEVKTESL	8	78	459.76047621973294	NaN	0	459.7605285644531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LEVKTESL_	ENSG00000213676|ENST00000375203|ATF6B;ENST00000495579.5_1_6:32088425-32095984:-|nuORF;nc|ENSG00000213676|Q99941-2|ATF6B	95.81516180277367	1.7418937515398478	6				NaN	NaN	0	NaN	8121	3368	11486
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11492	30.902	NaN	24414	30	0	2996.7	0.106	+			10841	FASMVHILM	9	82	524.769973240676	1047.525393548152	2	524.7708129882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FASMVHILM_	CMIP|p.G552C|1|0.45|ENSG00000153815|chr16:81699700-81699700|G/T|missense_variant;ENSG00000153815|ENST00000537098|CMIP;ENST00000565680.1_1_16:81725275-81734153:+|nuORF;nc|ENSG00000153815|Q8IY22-2|CMIP;nc|ENSG00000153815|Q8IY22-3|CMIP	79.9392285194092	0.09781135437301468	6				NaN	NaN	0	NaN	8122	3368	11486
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11493	30.904	NaN	27456	30	0	8719.2	0.036	+			30829	QEENITRAL	9	87	537.2821889126093	1072.5498248920185	2	537.2832641601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QEENITRAL_	ENSG00000099817|ENST00000615234|POLR2E;ENST00000586817.5_1_19:1089487-1094188:-|nuORF	123.20810148215591	0.019257656778428764	6				NaN	NaN	0	NaN	8123	3368	11486
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11511	30.939	NaN	238470	30	0	64530	0.114				-1	 	0	83	475.27048255819324	948.5264121831865	2	475.2710876464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8138	3371	11510
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11512	30.941	NaN	112720	30	0	26497	0.106				-1	 	0	99	502.2814119948676	1002.5482710565352	2	502.28192138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8139	3371	11510
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11513	30.943	NaN	15393	30	0	1953.7	0.106				-1	 	0	74	499.2866992319583	996.5588455307167	2	499.2872009277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8140	3371	11510
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11514	30.945	NaN	11462	30	0	1607.5	0.106	+			961	AEKAFVSV	8	70	425.7363037828372	849.4580546324744	2	425.73681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEKAFVSV_	ABCC3|p.L968Afs*31|1|0.33|ENSG00000108846|chr17:50675920-50675921|-/G|frameshift_variant;ENSG00000108846|ENST00000285238|ABCC3;ENST00000502426.5_1_17:48736553-48755440:+|nuORF;nc|ENSG00000108846|O15438-2|ABCC3;nc|ENSG00000108846|O15438-4|ABCC3	101.25262130126117	0.2499877059228457	6				NaN	NaN	0	NaN	8141	3371	11510
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11515	30.947	NaN	9892.9	30	0	1443.4	0.106	+			39931	STMEQLVEK	9	81	532.768540663296	NaN	0	532.768310546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STMEQLVEK_	ENSG00000133812|ENST00000256190|SBF2;ENST00000533770.5_1_11:9861043-10215451:-|nuORF;nc|ENSG00000133812|Q86WG5-3|SBF2;SBF2|p.E1445Sfs*15|1|0.09|ENSG00000133812|chr11:9808111-9808111|T/-|frameshift_variant	78.26377905018397	0.07733306720594871	6				NaN	NaN	0	NaN	8142	3371	11510
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11516	30.948	NaN	9029.2	30	0	1058.5	0.106			+	6980	CPVQRGSKV	9	82	487.26696108600373	972.5193692388075	2	487.2684631347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_CPVQRGSKV_	REV__ENST00000453008.2_1_2:88927414-88927579:+|nuORF	27.882242232435846	0.5426732730940306	6				NaN	NaN	0	NaN	8143	3371	11510
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11517	30.95	NaN	4633.3	30	0	411.59	0.037	+			34879	RYVDRVTEF	9	73	592.806260108138	1183.5979672830758	2	592.806884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RYVDRVTEF_	ENSG00000108465|ENST00000338399|CDK5RAP3;ENST00000582482.1_1_17:46058511-46058865:+|nuORF;nc|ENSG00000108465|Q96JB5-2|CDK5RAP3;nc|ENSG00000108465|Q96JB5-3|CDK5RAP3;nc|ENSG00000108465|Q96JB5-4|CDK5RAP3	30.568863376406313	0.5175653706841606	6				NaN	NaN	0	NaN	8144	3371	11510
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11518	30.951	NaN	7990.3	30	0	999.67	0.145				-1	MVSSSQKRAL	10	69	374.86931461525205	1121.5861144459561	3	374.8695373535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Oxidation (M)	_M(Oxidation (M))VSSSQKRAL_	PDZD2|p.K1843Rfs*31|3|0.26|ENSG00000133401|chr5:32088970-32088970|A/-|frameshift_variant	36.446750945000026	0.5818864909973037	6				NaN	NaN	0	NaN	8145	3371	11510
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11536	30.988	NaN	68636	30	0	20373	0.214				-1	 	0	90	508.81558198123315	1015.6166110292663	2	508.8160095214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8160	3374	11535
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11537	30.992	NaN	15305	30	0	5445.7	0.106	+			10910	FDGRVVAK	8	71	446.2555761440533	890.4965993549066	2	446.2557373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FDGRVVAK_	ENSG00000143183|ENST00000367881|TMCO1;nc|ENSG00000143183|Q9UM00-2|TMCO1;nc|ENSG00000143183|Q9UM00|TMCO1	79.71258880314673	0.32596852995588826	6				NaN	NaN	0	NaN	8161	3374	11535
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11538	30.994	NaN	17594	30	0	3287.1	0.106	+			29270	NYGDQVQHF	9	83	554.2457283144404	1106.4769036956807	2	554.246826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NYGDQVQHF_	ENSG00000154016|ENST00000284154|GRAP	172.24860141594272	0.002383092361811508	6				NaN	NaN	0	NaN	8162	3374	11535
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11539	30.996	NaN	23279	30	0	11060	0.106	+			32350	QTYEEALYK	9	70	572.7790097071697	1143.5434664811394	2	572.7799682617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QTYEEALYK_	ENSG00000106541|ENST00000419304|AGR2	154.1183686248401	0.005909203230691971	6				NaN	NaN	0	NaN	8163	3374	11535
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11540	30.997	NaN	5445.5	30	0	2072.2	0.106			+	46911	VITTLSTLLI	10	63	358.56530279196227	1072.6740789760868	3	358.56573486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VITTLSTLLI_	REV__tr|U7SFX4|U7SFX4_FUSNUHAE1familyhydrophobic/amphiphilicexporter-1(MainlyG-bacteria)OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02268PE=4SV=1	28.081489160057373	0.6505064946289502	6				NaN	NaN	0	NaN	8164	3374	11535
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11541	30.999	NaN	5563.1	30	0	860.77	0.033	+			5583	AVATALGLK	9	61	422.26792918551905	842.5213054378381	2	422.2682800292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AVATALGLK_	ENSG00000107819|ENST00000393459|SFXN3	107.00750918261382	0.032051501805654005	6				NaN	NaN	0	NaN	8165	3374	11535
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11542	31	NaN	16449	30	0	5335.6	0.139	+			48141	VSVTSEGIK	9	79	460.25838683537046	918.5022207375409	2	460.2583923339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VSVTSEGIK_	ENSG00000151743|ENST00000281471|AMN1;nc|ENSG00000151743|Q8IY45-2|AMN1	74.25504064058377	0.12238981753128622	6				NaN	NaN	0	NaN	8166	3374	11535
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11560	31.036	NaN	67567	30	0	18840	0.214				-1	 	0	77	364.8847566263599	1091.6324404792797	3	364.8851623535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8181	3377	11559
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11561	31.04	NaN	21062	30	0	3116.9	0.106	+			33375	RHTILKNKY	9	94	586.8478370373894	1171.6811211415786	2	586.8486938476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RHTILKNKY_	ENST00000464124.2_1_5:124144562-124144799:-|nuORF	35.61828744233558	0.47037581924408073	6				NaN	NaN	0	NaN	8182	3377	11559
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11562	31.042	NaN	20824	30	0	1434.2	0.106	+			27037	LYVNTQGLD	9	85	511.7629877261555	1021.511422519111	2	511.764404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LYVNTQGLD_	ENSG00000129946|ENST00000264554|SHC2;SHC2|p.A422T|2|0.36|ENSG00000129946|chr19:425142-425142|C/T|missense_variant	111.64827973302667	0.027316110422332632	6				NaN	NaN	0	NaN	8183	3377	11559
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11563	31.044	NaN	17143	30	0	3543.6	0.106	+			35025	SACSFTFSK	9	84	517.7332177088568	1033.4518824845136	2	517.7342529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_SAC(Carbamidomethyl (C))SFTFSK_	ENSG00000131375|ENST00000253693|CAPN7;ENST00000443567.5_1_3:15282348-15292515:+|nuORF	126.24258497203832	0.01742065577488747	6				NaN	NaN	0	NaN	8184	3377	11559
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11564	31.046	NaN	13163	30	0	1664	0.106	+			9799	EPARPDITY	9	79	531.2666333897694	1060.5187138463386	2	531.2670288085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EPARPDITY_	ENSG00000106153|ENST00000395422|CHCHD2;ENST00000473095.1_1_7:56170554-56174106:-|nuORF	90.36981228632155	0.0638227155548745	6				NaN	NaN	0	NaN	8185	3377	11559
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11565	31.047	NaN	9954.4	30	0	3910.4	0.038			+	1997	AKGPSPLRHPI	11	59	391.5678733611613	1171.6817906836839	3	391.5679016113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AKGPSPLRHPI_	REV__ENST00000533387.5_1_11:134130766-134134851:+|nuORF	23.52269567125451	0.7430573033454468	6				NaN	NaN	0	NaN	8186	3377	11559
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11566	31.048	NaN	9683.7	30	0	964.63	0.141	+			13056	GEYQRMGVM	9	80	535.7404514057032	1069.4663498782063	2	535.74169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GEYQRMGVM_	ENSG00000171848|ENST00000304567|RRM2;nc|ENSG00000171848|P31350-2|RRM2	39.252832667884924	0.4290233611298554	6				NaN	NaN	0	NaN	8187	3377	11559
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11584	31.086	NaN	33993	30	0	5677.6	0.214			+	47658	VSCVYLQLSK	10	91	380.5429618697335	1138.6070562094005	3	380.54327392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSCVYLQLSK_	REV__ENSG00000047644|ENST00000380861|WWC3	51.19269402634007	0.44601001148513897	6				NaN	NaN	0	NaN	8202	3380	11583
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11585	31.09	NaN	14339	30	0	5403.7	0.106				-1	 	0	67	455.29139736679286	908.5682418003857	2	455.2916259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8203	3380	11583
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11586	31.092	NaN	14295	30	0	1270.4	0.106			+	2426	APEPSAAAGR	10	79	463.73855924111905	925.4625655490381	2	463.7391052246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_APEPSAAAGR_	REV__ENSG00000182534|ENST00000449428|MXRA7;REV__nc|ENSG00000182534|P84157-3|MXRA7;REV__nc|ENSG00000182534|P84157|MXRA7	51.19269402634007	0.44601001148513897	6				NaN	NaN	0	NaN	8204	3380	11583
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11587	31.094	NaN	18593	30	0	1617.2	0.106	+			50438	YACEVTHQGL	10	85	560.759135055174	1119.503717177148	2	560.7586669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YACEVTHQGL_	nc|ENSG00000211592|P01834|IGKC	134.7655990226056	0.012149689860786373	6				NaN	NaN	0	NaN	8205	3380	11583
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11588	31.096	NaN	15810	30	0	5102.7	0.106				-1	 	0	86	400.5663384985893	1198.677186095968	3	400.56646728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8206	3380	11583
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11589	31.097	NaN	9548.8	30	0	1071.1	0.034				-1	 	0	82	477.29197269653247	952.569392459865	2	477.2920837402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8207	3380	11583
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11590	31.098	NaN	7069.5	30	0	516.86	0.14	+			25973	LSISCPAELP	10	75	515.2681812083147	1028.5218094834293	2	515.2693481445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSISCPAELP_	ENSG00000135625|ENST00000436467|EGR4;nc|ENSG00000135625|Q05215|EGR4	56.72105179125745	0.3956618550748046	6				NaN	NaN	0	NaN	8208	3380	11583
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11608	31.135	NaN	123640	30	0	14700	0.155				-1	 	0	91	474.2644617393689	946.5143705455379	2	474.2646179199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8223	3383	11607
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11609	31.138	NaN	44669	30	0	8587.3	0.106	+			51396	YTNGKCVIL	9	86	534.280796882437	1066.547040831674	2	534.2813720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_YTNGKC(Carbamidomethyl (C))VIL_	ENSG00000071127|ENST00000499869|WDR1;ENST00000509600.1_1_4:10117520-10118290:-|nuORF;ENST00000514319.5_1_4:10110004-10118075:-|nuORF;nc|ENSG00000071127|O75083-3|WDR1	72.87924865735499	0.12833875048249987	6				NaN	NaN	0	NaN	8224	3383	11607
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11610	31.14	NaN	11924	30	0	1778.9	0.106	+			21336	KLTYIYIQK	9	87	585.3493005197449	1168.6840481062898	2	585.3501586914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KLTYIYIQK_	ENST00000383746.7_2_3:44396236-44396287:+|nuORF	181.4070731898895	0.0011547877412507563	6				NaN	NaN	0	NaN	8225	3383	11607
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11611	31.142	NaN	17461	30	0	1774.5	0.106	+			2418	APAPTREAN	9	84	463.73855924111905	925.4625655490381	2	463.7383728027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_APAPTREAN_	ENST00000578402.5_2_17:61777915-61777969:-|nuORF	54.776311868738084	0.25715957988447635	6				NaN	NaN	0	NaN	8226	3383	11607
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11612	31.144	NaN	15378	30	0	4879	0.106			+	24153	LELQERKE	8	83	522.7886080535999	1043.5626631739997	2	522.7881469726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LELQERKE_	REV__ENSG00000114019|ENST00000249883|AMOTL2;REV__ENST00000506326.1_1_3:134076549-134085275:-|nuORF;REV__nc|ENSG00000114019|Q9Y2J4-3|AMOTL2;REV__nc|ENSG00000114019|Q9Y2J4-4|AMOTL2;REV__nc|ENSG00000114019|Q9Y2J4|AMOTL2	77.31757898189308	0.345924878368729	6				NaN	NaN	0	NaN	8227	3383	11607
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11613	31.145	NaN	30440	30	0	4048.2	0.106			+	18970	IVRGQRHR	8	89	511.309338278096	1020.604123622992	2	511.3099060058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IVRGQRHR_	REV__ENSG00000205269|ENST00000379426|TMEM170B	47.91560031466742	0.6071945918984287	6				NaN	NaN	0	NaN	8228	3383	11607
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11614	31.147	NaN	57802	30	0	7212.6	0.035	+			3769	ATAELIMSR	9	88	496.265330548615	990.51610816403	2	496.2655029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATAELIMSR_	ENSG00000105677|ENST00000222284|TMEM147;ENST00000477168.6_1_19:36036641-36037810:+|nuORF;ENST00000595467.1_1_19:36037522-36037810:+|nuORF;nc|ENSG00000105677|Q9BVK8-2|TMEM147	195.04605151776784	5.427472092243166E-05	6				NaN	NaN	0	NaN	8229	3383	11607
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11632	31.184	NaN	16277	30	0	3575.1	0.214			+	30074	PQLLRADTP	9	79	505.78446314625154	1009.5543733593031	2	505.7850036621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PQLLRADTP_	REV__ENSG00000186862|ENST00000619208|PDZD7	51.33545320467046	0.2872990594074956	6				NaN	NaN	0	NaN	8244	3386	11631
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11633	31.187	NaN	12610	30	0	2251.6	0.106				-1	 	0	82	597.3289060876655	1192.6432592421309	2	597.3302001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8245	3386	11631
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11634	31.189	NaN	8496.9	30	0	811.11	0.106	+			49959	WAAAGLSSEA	10	77	481.73219588098584	NaN	0	481.7321472167969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_WAAAGLSSEA_	ENST00000581571.5_1_18:6927563-6928939:-|nuORF;ENST00000581725.5_1_18:6926489-6928939:-|nuORF	64.20726635412375	0.1999210135493042	6				NaN	NaN	0	NaN	8246	3386	11631
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11635	31.191	NaN	10502	30	0	1332.7	0.106			+	37386	SLFVNLGIN	9	75	488.7766309365402	975.5387089398804	2	488.77703857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLFVNLGIN_	REV__ENSG00000132436|ENST00000433017|FIGNL1;REV__FIGNL1|p.K309Sfs*16|2|0.21|ENSG00000132436|chr7:50446362-50446362|T/-|frameshift_variant;REV__nc|ENSG00000132436|Q6PIW4-2|FIGNL1	37.81151784470057	0.4459294069877048	6				NaN	NaN	0	NaN	8247	3386	11631
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11636	31.193	NaN	6881.5	30	0	878.34	0.106	+			21400	KMNKMKFK	8	80	543.7939431064032	1085.5733332796062	2	543.79541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Oxidation (M)	_KM(Oxidation (M))NKM(Oxidation (M))KFK_	ENSG00000163535|ENST00000357799|SGO2;nc|ENSG00000163535|Q562F6-2|SGO2	92.19062340807069	0.27083854825242376	6				NaN	NaN	0	NaN	8248	3386	11631
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11637	31.195	NaN	5963.6	30	0	1261.9	0.033	+			45831	VAKESIPL	8	60	428.7599900343501	855.5054271355002	2	428.76031494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VAKESIPL_	ENSG00000274070|ENST00000616305|CASTOR2;ENST00000328453.9_1_7:99831276-99869601:-|nuORF;ENST00000544802.5_1_7:72569162-72589455:+|nuORF	73.97473282117947	0.3737790450121076	6				NaN	NaN	0	NaN	8249	3386	11631
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11638	31.195	NaN	7528.3	30	0	558.24	0.14				-1	LCRLMAPY	8	80	520.2556555317672	1038.4967581303342	2	520.2565307617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C),Oxidation (M)	_LC(Carbamidomethyl (C))RLM(Oxidation (M))APY_	ENSG00000196305|ENST00000443024|IARS1	54.76467175910256	0.5536104764165384	6				NaN	NaN	0	NaN	8250	3386	11631
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11656	31.235	NaN	119820	30	0	48151	0.214			+	45375	TVTFSVSTK	9	92	485.2656584475825	968.516763961965	2	485.266357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVTFSVSTK_	REV__EFCAB7|p.F431Lfs*3|2|0.41|ENSG00000203965|chr1:63557186-63557186|T/-|frameshift_variant;REV__ENSG00000203965|ENST00000371088|EFCAB7;REV__ENST00000493605.1_1_1:63999785-63999890:+|nuORF;REV__nc|ENSG00000203965|A8K855-2|EFCAB7	71.87747018426188	0.13267044672804276	6				NaN	NaN	0	NaN	8265	3389	11655
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11657	31.238	NaN	19401	30	0	3256.9	0.106	+			7219	DAISKTYSY	9	91	524.2529130539687	1046.4912731747372	2	524.2537841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DAISKTYSY_	ENSG00000140988|ENST00000343262|RPS2;ENST00000397318.4_1_X:40794237-40794825:-|nuORF;ENST00000438210.1_1_1:40428398-40429073:+|nuORF;ENST00000441047.1_1_17:51834352-51834658:-|nuORF;ENST00000443417.1_1_9:102879039-102879699:-|nuORF;ENST00000475555.1_1_4:144270430-144270667:-|nuORF;ENST00000494359.1_1_11:17250107-17250695:+|nuORF;ENST00000529806.5_1_16:2012098-2012518:-|nuORF;ENST00000532746.5_2_16:2012101-2013785:-|nuORF;ENST00000533872.5_1_16:2012101-2013018:-|nuORF;RPL18-RPS2|1|fusion	138.06239232086	0.011389075116295402	6				NaN	NaN	0	NaN	8266	3389	11655
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11658	31.24	NaN	24972	30	0	5308	0.106	+			4442	ATILAGDIKVK	11	87	376.90402692798864	1127.690251384166	3	376.904541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATILAGDIKVK_	ENSG00000170604|ENST00000302165|IRF2BP1	77.53327743719008	0.17293716712445248	6				NaN	NaN	0	NaN	8267	3389	11655
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11659	31.242	NaN	6340.1	30	0	1452.8	0.106				-1	 	0	67	448.2709473713142	894.5273418094284	2	448.2715759277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8268	3389	11655
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11660	31.244	NaN	5930.5	30	0	424.3	0.106	+			38320	SREVGEHL	8	75	463.73855924111905	925.4625655490381	2	463.73895263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SREVGEHL_	ENST00000592447.5_1_18:11886825-11897263:-|nuORF;nc|ENSG00000154889|Q53F39-5|MPPE1	47.91560031466742	0.6071945918984287	6				NaN	NaN	0	NaN	8269	3389	11655
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11661	31.246	NaN	4417.1	30	0	318.44	0.035				-1	CCCKIADK	8	64	499.2182745671564	NaN	0	499.2184143066406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))C(Carbamidomethyl (C))CKIADK_	ENSG00000163806|ENST00000334056|SPDYA;ENST00000462832.5_1_2:29038880-29063343:+|nuORF;nc|ENSG00000163806|Q5MJ70-1|SPDYA	31.529811441608018	1.7418937515398478	6				NaN	NaN	0	NaN	8270	3389	11655
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11662	31.246	NaN	5438.1	30	0	1972.7	0.138			+	24050	LEGSPLAG	8	60	372.2015640112495	NaN	0	372.2017517089844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LEGSPLAG_	REV__ENSG00000087303|ENST00000216286|NID2;REV__nc|ENSG00000087303|Q14112-2|NID2;REV__NID2|p.K1297Nfs*26|1|0.42|ENSG00000087303|chr14:52006650-52006650|T/-|frameshift_variant	42.47446043378293	1.7418937515398478	6				NaN	NaN	0	NaN	8271	3389	11655
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11680	31.285	NaN	24434	30	0	5302.8	0.213				-1	ERVCQLFTF	9	95	600.2977478970025	1198.580942860805	2	600.2991333007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_ERVC(Carbamidomethyl (C))QLFTF_	ENST00000335154.9_1_12:50038759-50038969:-|nuORF	47.95952297671804	0.32689736945648856	6				NaN	NaN	0	NaN	8286	3392	11679
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11681	31.289	NaN	33161	30	0	4712.6	0.106				-1	 	0	96	477.2555339752898	952.4965150173796	2	477.25579833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8287	3392	11679
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11682	31.291	NaN	7477.1	30	0	719.37	0.106	+			12072	GAAGRPLEL	9	68	442.25297319184244	882.4913934504849	2	442.25299072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GAAGRPLEL_	ENSG00000120802|ENST00000556029|TMPO;nc|ENSG00000120802|P42167-2|TMPO;TMPO|p.L427Cfs*13|1|0.4|ENSG00000120802|chr12:98547767-98547767|T/-|frameshift_variant;TMPO|p.L427Ffs*18|1|0.28|ENSG00000120802|chr12:98547766-98547767|-/T|frameshift_variant;TMPO|p.R409Tfs*36|1|0.06|ENSG00000120802|chr12:98547707-98547708|-/A|frameshift_variant	71.87747018426188	0.13267044672804276	6				NaN	NaN	0	NaN	8288	3392	11679
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11683	31.292	NaN	8625.3	30	0	1567.4	0.106	+			4048	ATDELSSALAK	11	84	553.2898597555246	1104.5651665778491	2	553.2903442382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATDELSSALAK_	ENSG00000073614|ENST00000399788|KDM5A;nc|ENSG00000073614|P29375-2|KDM5A	147.73206827945663	7.428873318560114E-05	6				NaN	NaN	0	NaN	8289	3392	11679
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11684	31.294	NaN	15252	30	0	1742.7	0.106	+			8542	EAVKLCDSY	9	93	542.7520203438315	1083.489487754463	2	542.7527465820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_EAVKLC(Carbamidomethyl (C))DSY_	ENSG00000125944|ENST00000302271|HNRNPR;HNRNPR|p.L367Qfs*19|1|0.05|ENSG00000125944|chr1:23313620-23313621|-/TTTAATCTCT|frameshift_variant;HNRNPR|p.W594Gfs*15|1|0.23|ENSG00000125944|chr1:23310575-23310576|CA/-|frameshift_variant;nc|ENSG00000125944|O43390-2|HNRNPR;nc|ENSG00000125944|O43390-3|HNRNPR;nc|ENSG00000125944|O43390-4|HNRNPR	157.32903759742106	0.0051608477690748295	6				NaN	NaN	0	NaN	8290	3392	11679
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11685	31.296	NaN	15292	30	0	1219.9	0.106	+			28311	NEFEATQKL	9	80	540.2713055654862	1078.5280581977722	2	540.2719116210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NEFEATQKL_	ENSG00000165030|ENST00000297689|NFIL3	148.6902309647307	0.00717441509122429	6				NaN	NaN	0	NaN	8291	3392	11679
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11686	31.298	NaN	5938.6	30	0	797.85	0.036	+			4574	ATLENAPPQD	10	71	528.2551625626195	1054.4957721920389	2	528.2561645507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATLENAPPQD_	nc|ENSG00000181781|Q3SX64-2|CIMAP1D	49.536043120802724	0.461275219792494	6				NaN	NaN	0	NaN	8292	3392	11679
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11701	31.33	NaN	46946	30	0	11374	0.214			+	-1	SIVARVFNMM	10	104	400.5346899412011	1198.5822404238033	3	400.5351257324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_SIVARVFNM(Oxidation (M))M(Oxidation (M))_	REV__ENSG00000140678|ENST00000268296|ITGAX;REV__ITGAX|p.R426Afs*20|3|0.11|ENSG00000140678|chr16:31362665-31362665|C/-|frameshift_variant;REV__ITGAX|p.T169M|1|0.59|ENSG00000140678|chr16:31359775-31359775|C/T|missense_variant	35.15202426646627	0.5927656479315102	6				NaN	NaN	0	NaN	8304	3395	11700
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11702	31.333	NaN	129600	30	0	48610	0.106				-1	 	0	98	374.22021043794507	1119.6388019140352	3	374.2205810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8305	3395	11700
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11703	31.335	NaN	32645	30	0	9129.7	0.106	+			48473	VTLSWKPVQK	10	98	395.9042592000053	1184.6909482002159	3	395.9044494628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTLSWKPVQK_	ENSG00000166181|ENST00000531273|API5;nc|ENSG00000166181|Q9BZZ5-1|API5;nc|ENSG00000166181|Q9BZZ5-2|API5;nc|ENSG00000166181|Q9BZZ5-5|API5;nc|ENSG00000166181|Q9BZZ5-6|API5	50.033510581677724	0.4566913063131936	6				NaN	NaN	0	NaN	8306	3395	11700
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11704	31.337	NaN	20693	30	0	5168.5	0.106	+			33113	REMDEQIRL	9	78	595.3023975070107	1188.5902420808213	2	595.3036499023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_REMDEQIRL_	ENST00000413233.1_1_7:116612221-116612569:-|nuORF;ENST00000600996.1_1_19:42012510-42012810:+|nuORF;nc|ENSG00000143549|P06753-2|TPM3;nc|ENSG00000143549|P06753-3|TPM3;nc|ENSG00000143549|P06753-6|TPM3	120.30596017624542	0.02101454110788768	6				NaN	NaN	0	NaN	8307	3395	11700
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11705	31.339	NaN	8279.9	30	0	1588.8	0.106	+			31806	QPMNPTQNM	9	80	530.7304685145045	1059.446384095809	2	530.7315063476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QPMNPTQNM_	ENSG00000135387|ENST00000341394|CAPRIN1;nc|ENSG00000135387|Q14444-2|CAPRIN1	78.26377905018397	0.10505600812668463	6				NaN	NaN	0	NaN	8308	3395	11700
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11706	31.341	NaN	9485.5	30	0	1630	0.035			+	9471	EKQLTPAKL	9	74	514.311872147488	NaN	0	514.3114013671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EKQLTPAKL_	REV__ENSG00000031691|ENST00000335783|CENPQ	65.46538089061403	0.1260090208616529	6				NaN	NaN	0	NaN	8309	3395	11700
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11707	31.341	NaN	16986	30	0	5152.8	0.141	+			47526	VQPSKYHFL	9	82	559.8026201011476	1117.590687269095	2	559.8037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VQPSKYHFL_	ENSG00000177383|ENST00000317897|MAGEF1	71.87747018426188	0.13267044672804276	6				NaN	NaN	0	NaN	8310	3395	11700
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11725	31.379	NaN	21184	30	0	5718.9	0.214				-1	 	0	80	508.81558198123315	1015.6166110292663	2	508.8161926269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8325	3398	11724
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11726	31.383	NaN	36637	30	0	5478.5	0.106	+			50401	YAAGVHSVL	9	88	458.74731117685633	915.4800694205127	2	458.74774169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YAAGVHSVL_	AP5Z1|p.Q696Rfs*6|3|0.43|ENSG00000242802|chr7:4790814-4790814|C/-|frameshift_variant;ENSG00000242802|ENST00000649063|AP5Z1;ENST00000490487.1_1_7:4829477-4830874:+|nuORF	101.21157088398209	0.03796561369277615	6				NaN	NaN	0	NaN	8326	3398	11724
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11727	31.385	NaN	10766	30	0	2931	0.106			+	8537	EAVKGKAR	8	72	429.76078913513976	857.5070253370795	2	429.7611083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EAVKGKAR_	REV__tr|U7T655|U7T655_FUSNUDNApolymerasebacteriophage-typeOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00113PE=3SV=1	33.51558372728122	0.7005509609380386	6				NaN	NaN	0	NaN	8327	3398	11724
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11728	31.387	NaN	7519.3	30	0	1944.9	0.106	+			46123	VDIVMNHHL	9	60	359.85467717453616	1076.5422021238085	3	359.8550720214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VDIVMNHHL_	ENSG00000133112|ENST00000530705|TPT1;ENST00000533567.5_1_13:45912892-45914385:-|nuORF;nc|ENSG00000133112|P13693-2|TPT1	44.377184641726394	0.36891676396732553	6				NaN	NaN	0	NaN	8328	3398	11724
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11729	31.388	NaN	7138.5	30	0	1402.1	0.106			+	23464	LAEHETAL	8	62	442.22915746003935	882.4437619868787	2	442.2294616699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LAEHETAL_	REV__ENSG00000058335|ENST00000558480|RASGRF1;REV__ENST00000560334.5_1_15:79271198-79356973:-|nuORF;REV__nc|ENSG00000058335|Q13972|RASGRF1;REV__RASGRF1|p.L299Yfs*9|1|0.19|ENSG00000058335|chr15:79035193-79035193|A/-|frameshift_variant	42.47446043378293	0.6409579893742323	6				NaN	NaN	0	NaN	8329	3398	11724
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11730	31.39	NaN	6314.1	30	0	741.73	0.033			+	38033	SPPHPPFL	8	67	446.2391870615949	890.4638211899899	2	446.2395935058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SPPHPPFL_	REV__ENSG00000180264|ENST00000696331|ADGRD2;REV__nc|ENSG00000180264|Q7Z7M1|ADGRD2	49.21078951299608	0.5991576752473486	6				NaN	NaN	0	NaN	8330	3398	11724
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11731	31.391	NaN	12452	30	0	2618.1	0.14				-1	 	0	74	511.2924084065007	1020.5702638798015	2	511.2928771972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8331	3398	11724
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11749	31.43	NaN	16431	30	0	1449.4	0.214				-1	 	0	85	496.2467452947648	990.4789376563297	2	496.24725341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8346	3401	11748
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11750	31.434	NaN	18934	30	0	2872.4	0.106	+			2928	ASCQYSLLK	9	92	535.2702425803316	1068.525932227463	2	535.2713623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_ASC(Carbamidomethyl (C))QYSLLK_	ENSG00000100731|ENST00000304743|PCNX1;ENSG00000135749|ENST00000258229|PCNX2;ENSG00000197136|ENST00000355703|PCNX3;ENST00000324142.4_1_1:233337898-233388268:-|nuORF;ENST00000475463.6_1_1:233201380-233353905:-|nuORF;ENST00000519530.1_1_1:233353734-233362997:-|nuORF;nc|ENSG00000100731|Q96RV3-3|PCNX1;nc|ENSG00000100731|Q96RV3-4|PCNX1;nc|ENSG00000135749|A6NKB5-2|PCNX2;nc|ENSG00000135749|A6NKB5-5|PCNX2;nc|ENSG00000197136|Q9H6A9-2|PCNX3	148.6902309647307	0.00717441509122429	6				NaN	NaN	0	NaN	8347	3401	11748
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11751	31.436	NaN	18029	30	0	8754.3	0.106	+			9084	EGIEEGVVK	9	73	480.25544186178865	958.4963307903773	2	480.2560729980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EGIEEGVVK_	GIGYF1|p.L111Wfs*234|1|0.42|ENSG00000146830|chr7:100687547-100687547|G/-|frameshift_variant	56.72105179125745	0.24094814563026265	6				NaN	NaN	0	NaN	8348	3401	11748
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11752	31.438	NaN	12738	30	0	1208.7	0.106	+			10426	EVITEAEKI	9	80	516.2863027851986	1030.558052637197	2	516.7897338867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EVITEAEKI_	AKAP11|p.C1327Lfs*13|1|0.05|ENSG00000023516|chr13:42302724-42302725|-/CTTCTACTTTATAATC|frameshift_variant;AKAP11|p.F1607Sfs*48|1|0.11|ENSG00000023516|chr13:42303562-42303562|T/-|frameshift_variant;AKAP11|p.H1753Ifs*3|1|0.11|ENSG00000023516|chr13:42308589-42308589|T/-|frameshift_variant;ENSG00000023516|ENST00000025301|AKAP11	54.776311868738084	0.25715957988447635	6				NaN	NaN	0	NaN	8349	3401	11748
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11753	31.44	NaN	13758	30	0	2270.3	0.106	+			38971	SSRRRVNSL	9	79	537.8106783779602	1073.6068038227204	2	537.8118286132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSRRRVNSL_	ENSG00000091409|ENST00000684293|ITGA6;nc|ENSG00000091409|P23229-3|ITGA6;nc|ENSG00000091409|P23229-4|ITGA6;nc|ENSG00000091409|P23229-5|ITGA6;nc|ENSG00000091409|P23229-6|ITGA6;nc|ENSG00000091409|P23229-7|ITGA6;nc|ENSG00000091409|P23229-9|ITGA6;nc|ENSG00000091409|P23229|ITGA6	36.446750945000026	0.4619375763483977	6				NaN	NaN	0	NaN	8350	3401	11748
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11754	31.441	NaN	21536	30	0	8433.9	0.03				-1	 	0	60	336.1906388069948	670.3667246807896	2	336.1911315917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8351	3401	11748
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11755	31.442	NaN	25541	30	0	6156.2	0.14	+			14378	GTAGNGWFNK	10	89	526.2509313060789	1050.4873096789577	2	526.25146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GTAGNGWFNK_	ENST00000525241.1_1_11:35211476-35226207:+|nuORF;ENST00000534296.5_1_11:35211476-35226207:+|nuORF	163.1509380574825	0.005863099200027773	6				NaN	NaN	0	NaN	8352	3401	11748
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11773	31.481	NaN	20699	30	0	3494.1	0.214	+			47943	VSMDYAISK	9	89	507.2515149290193	1012.4884769248387	2	507.2519836425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSMDYAISK_	ENSG00000196453|ENST00000247930|ZNF777;ZNF777|p.P504Rfs*5|1|0.44|ENSG00000196453|chr7:149432761-149432761|G/-|frameshift_variant	146.78539889680295	0.007618400906539062	6				NaN	NaN	0	NaN	8367	3404	11772
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11774	31.485	NaN	13368	30	0	1472.7	0.106	+			16113	HDLVIKSL	8	73	462.7783272883282	923.5421016434565	2	462.7789611816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HDLVIKSL_	ENSG00000100342|ENST00000397278|APOL1;nc|ENSG00000100342|O14791-2|APOL1;nc|ENSG00000100342|O14791-3|APOL1	131.03138772384656	0.22501736558723914	6				NaN	NaN	0	NaN	8368	3404	11772
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11775	31.487	NaN	29210	30	0	2425.1	0.106	+			46380	VELAESRAL	9	94	494.27702151336973	986.5394900935395	2	494.27703857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VELAESRAL_	ENST00000340533.8_2_18:71959085-71959217:-|nuORF	104.01359247289065	0.03510646158778409	6				NaN	NaN	0	NaN	8369	3404	11772
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11776	31.489	NaN	17504	30	0	3677.2	0.106	+			44967	TVCDLIQSK	9	83	532.2758791110124	1062.5372052888247	2	532.2765502929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_TVC(Carbamidomethyl (C))DLIQSK_	ENSG00000030582|ENST00000053867|GRN;ENST00000585348.1_1_17:42428425-42428671:+|nuORF;nc|ENSG00000030582|P28799-2|GRN	177.3047273071476	0.0015666121956477066	6				NaN	NaN	0	NaN	8370	3404	11772
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11777	31.491	NaN	7672.4	30	0	1974.7	0.106				-1	 	0	66	421.2602051254298	840.5058573176597	2	421.2605285644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8371	3404	11772
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11778	31.492	NaN	7124	30	0	1207.1	0.036	+			17775	IESSPQYRL	9	75	546.7871000457175	1091.5596471582348	2	546.7880249023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IESSPQYRL_	ATXN2L|p.P636Rfs*19|1|0.48|ENSG00000168488|chr16:28833301-28833301|C/-|frameshift_variant;ATXN2L|p.Q1002Kfs*50|2|0.29|ENSG00000168488|chr16:28836029-28836029|G/-|frameshift_variant;ATXN2L|p.T504Hfs*33|1|0.12|ENSG00000168488|chr16:28832387-28832388|-/C|frameshift_variant;ENSG00000168488|ENST00000336783|ATXN2L;ENST00000563314.5_1_16:28834580-28846939:+|nuORF;ENST00000564284.1_1_16:28841101-28842119:+|nuORF;ENST00000570284.1_1_16:28840745-28842349:+|nuORF;nc|ENSG00000168488|Q8WWM7-2|ATXN2L;nc|ENSG00000168488|Q8WWM7-3|ATXN2L;nc|ENSG00000168488|Q8WWM7-4|ATXN2L;nc|ENSG00000168488|Q8WWM7-5|ATXN2L;nc|ENSG00000168488|Q8WWM7-6|ATXN2L;nc|ENSG00000168488|Q8WWM7-7|ATXN2L;nc|ENSG00000168488|Q8WWM7-8|ATXN2L;nc|ENSG00000168488|Q8WWM7-9|ATXN2L	61.691277971877994	0.19951612995419254	6				NaN	NaN	0	NaN	8372	3404	11772
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11779	31.493	NaN	9122	30	0	1242.1	0.141	+			38539	SSDSGSGFWK	10	78	529.2324745706352	1056.4503962080703	2	529.2324829101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSDSGSGFWK_	ENSG00000126709|ENST00000361157|IFI6;nc|ENSG00000126709|P09912-2|IFI6;nc|ENSG00000126709|P09912-3|IFI6	134.7655990226056	0.012149689860786373	6				NaN	NaN	0	NaN	8373	3404	11772
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11797	31.531	NaN	18411	30	0	5523.4	0.214	+			48939	VVEGSFVYK	9	83	514.2760015098295	1026.5374500864589	2	514.2772216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVEGSFVYK_	ENSG00000203879|ENST00000447750|GDI1;ENST00000491154.1_1_X:153666748-153668487:+|nuORF;GDI1|p.G114D|1|0.12|ENSG00000203879|chrX:154439093-154439093|G/A|missense_variant	82.7504851949679	0.08565546331141553	6				NaN	NaN	0	NaN	8388	3407	11796
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11798	31.534	NaN	33357	30	0	6876.1	0.106				-1	 	0	91	458.26582664729966	914.5171003613993	2	458.2665710449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8389	3407	11796
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11799	31.536	NaN	18215	30	0	3441.4	0.106				-1	NQHLQEQVAM	10	78	405.1924663652199	1212.5555696958597	3	405.1929016113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_NQHLQEQVAM(Oxidation (M))_	ENSG00000140859|ENST00000445690|KIFC3;KIFC3|p.R278W|1|0.35|ENSG00000140859|chr16:57770634-57770634|G/A|missense_variant;nc|ENSG00000140859|Q9BVG8-4|KIFC3;nc|ENSG00000140859|Q9BVG8-5|KIFC3;nc|ENSG00000140859|Q9BVG8-6|KIFC3;nc|ENSG00000140859|Q9BVG8|KIFC3	25.125986553469783	0.6746423231557295	6				NaN	NaN	0	NaN	8390	3407	11796
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11800	31.538	NaN	24108	30	0	12100	0.106			+	10490	EVSDPPIA	8	70	414.21036929259117	826.4061856519824	2	414.21112060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EVSDPPIA_	REV__AKAP12|p.E1404Rfs*18|1|0.17|ENSG00000131016|chr6:151352600-151352600|G/-|frameshift_variant;REV__AKAP12|p.N1461Mfs*26|1|0.52|ENSG00000131016|chr6:151352767-151352767|A/-|frameshift_variant;REV__ENSG00000131016|ENST00000402676|AKAP12;REV__nc|ENSG00000131016|Q02952-2|AKAP12;REV__nc|ENSG00000131016|Q02952-3|AKAP12	65.89745868150666	0.44339748671293633	6				NaN	NaN	0	NaN	8391	3407	11796
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11801	31.54	NaN	13613	30	0	1574.1	0.106	+			31711	QNRHSPDHP	9	83	544.2557389330518	1086.4969249329035	2	544.2572631835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QNRHSPDHP_	ENST00000337672.7_2_11:57471512-57471608:-|nuORF	47.657333605630114	0.33044192980041115	6				NaN	NaN	0	NaN	8392	3407	11796
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11802	31.542	NaN	14383	30	0	3282.1	0.038				-1	 	0	80	400.5663384985893	1198.677186095968	3	400.5668029785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8393	3407	11796
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11803	31.543	NaN	11105	30	0	4017.3	0.138			+	23918	LDLPETAS	8	67	423.21550243221134	844.4164519312227	2	423.21624755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LDLPETAS_	REV__DUSP4|p.P196Sfs*42|1|0.52|ENSG00000120875|chr8:29338496-29338497|-/C|frameshift_variant;REV__ENSG00000120875|ENST00000240100|DUSP4;REV__nc|ENSG00000120875|Q13115-2|DUSP4	62.97842346883844	0.4722955155785405	6				NaN	NaN	0	NaN	8394	3407	11796
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11821	31.58	NaN	692780	30	0	472700	0.168				-1	 	0	110	367.19712023834563	1098.5695313152369	3	367.197509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8409	3410	11820
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11822	31.583	NaN	89531	30	0	65630	0.106				-1	 	0	79	350.2062438362061	698.3979347392122	2	350.2066955566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8410	3410	11820
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11823	31.585	NaN	92103	30	0	11935	0.106	+			44193	TRDRDSGRLK	10	104	602.3312945945643	1202.6480362559284	2	602.3324584960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TRDRDSGRLK_	ENSG00000185379|ENST00000345365|RAD51D;nc|ENSG00000185379|O75771-3|RAD51D;nc|ENSG00000185379|O75771-4|RAD51D;nc|ENSG00000185379|O75771-5|RAD51D;nc|ENSG00000185379|O75771-8|RAD51D	101.60071028292904	0.07294315263144992	6				NaN	NaN	0	NaN	8411	3410	11820
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11824	31.587	NaN	112340	30	0	14205	0.106				-1	 	0	122	450.23397415080314	898.4533953684063	2	450.2343444824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8412	3410	11820
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11825	31.588	NaN	19387	30	0	10081	0.106			+	47571	VRGVYITN	8	71	461.2603160819168	920.5060792306336	2	461.2607727050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VRGVYITN_	REV__ENSG00000080839|ENST00000373664|RBL1;REV__nc|ENSG00000080839|P28749-2|RBL1	84.9155231211612	0.2928622555056503	6				NaN	NaN	0	NaN	8413	3410	11820
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11826	31.59	NaN	12910	30	0	1121	0.106	+			936	AEILQESRM	9	79	538.7716000382046	1075.5286471432091	2	538.774169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEILQESRM_	ENSG00000171530|ENST00000380377|TBCA;ENST00000436520.1_1_X:33059580-33059835:+|nuORF;nc|ENSG00000171530|O75347-2|TBCA	79.48907831485694	0.09975780661107167	6				NaN	NaN	0	NaN	8414	3410	11820
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11827	31.592	NaN	15600	30	0	6784.9	0.036	+			8978	EFLTKTAKF	9	96	542.805197242505	1083.5958415518098	2	542.805908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EFLTKTAKF_	ENSG00000100796|ENST00000554943|PPP4R3A;ENSG00000275052|ENST00000616407|PPP4R3B;ENST00000554574.1_1_14:91942052-91948315:-|nuORF;nc|ENSG00000100796|Q6IN85-2|PPP4R3A;nc|ENSG00000100796|Q6IN85-5|PPP4R3A;nc|ENSG00000275052|Q5MIZ7-2|PPP4R3B;nc|ENSG00000275052|Q5MIZ7-3|PPP4R3B	145.15565482312357	0.00806134135205793	6				NaN	NaN	0	NaN	8415	3410	11820
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11845	31.627	NaN	79042	30	0	11481	0.214	+			45485	TYDKGYQF	8	104	511.23427968845715	1020.4540064437143	2	511.2348937988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TYDKGYQF_	ENSG00000139197|ENST00000675855|PEX5;nc|ENSG00000139197|P50542-2|PEX5;nc|ENSG00000139197|P50542-3|PEX5;nc|ENSG00000139197|P50542-4|PEX5	93.19546047674547	0.2677966331495483	6				NaN	NaN	0	NaN	8430	3413	11844
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11846	31.63	NaN	13048	30	0	1819.1	0.106	+			37077	SISDKFFQK	9	78	550.2916589337863	1098.5687649343724	2	550.2925415039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SISDKFFQK_	ENSG00000089472|ENST00000343002|HEPH;HEPH|p.R1086Qfs*4|1|0.29|ENSG00000089472|chrX:66266444-66266445|-/C|frameshift_variant;nc|ENSG00000089472|Q9BQS7-2|HEPH;nc|ENSG00000089472|Q9BQS7-3|HEPH;nc|ENSG00000089472|Q9BQS7-4|HEPH	154.1183686248401	0.005909203230691971	6				NaN	NaN	0	NaN	8431	3413	11844
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11847	31.632	NaN	11701	30	0	799.2	0.106				-1	 	0	79	466.2575064746885	930.500460016177	2	466.2579040527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8432	3413	11844
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11848	31.634	NaN	8624.9	30	0	695.43	0.106	+			35142	SAIAAVIAR	9	65	436.2708887516822	870.5272245701644	2	436.2714538574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SAIAAVIAR_	ENSG00000165949|ENST00000612813|IFI27;nc|ENSG00000165949|P40305-1|IFI27;nc|ENSG00000165949|P40305-3|IFI27;nc|ENSG00000165949|P40305-4|IFI27	87.69643885390035	0.07135982304947239	6				NaN	NaN	0	NaN	8433	3413	11844
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11849	31.636	NaN	6443.8	30	0	442.79	0.106			+	43420	TGKKQDTPL	9	79	494.27702151336973	986.5394900935395	2	494.77813720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TGKKQDTPL_	REV__KIAA1671|p.P1367L|1|0.27|ENSG00000197077|chr22:25041230-25041230|C/T|missense_variant	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	8434	3413	11844
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11850	31.638	NaN	11003	30	0	1520.2	0.106			+	3866	ATANLEILK	9	86	486.7888798547401	971.5632067762803	2	486.78985595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATANLEILK_	REV__ENSG00000203995|ENST00000371528|ZYG11A;REV__ZYG11A|p.V135A|1|0.16|ENSG00000203995|chr1:52857145-52857145|T/C|missense_variant	65.46538089061403	0.16805504838372562	6				NaN	NaN	0	NaN	8435	3413	11844
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11851	31.64	NaN	9503.4	30	0	960.18	0.035	+			7773	DPDATSLKY	9	77	505.2447817152938	1008.4750104973876	2	505.2452697753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DPDATSLKY_	ENSG00000131778|ENST00000369258|CHD1L;nc|ENSG00000131778|Q86WJ1-2|CHD1L;nc|ENSG00000131778|Q86WJ1-3|CHD1L;nc|ENSG00000131778|Q86WJ1-4|CHD1L;nc|ENSG00000131778|Q86WJ1-5|CHD1L	120.8684288430529	0.02067403653475984	6				NaN	NaN	0	NaN	8436	3413	11844
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11869	31.677	NaN	23188	30	0	2141.1	0.214				-1	 	0	86	589.8147176541676	1177.614882375135	2	589.8155517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8451	3416	11868
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11870	31.681	NaN	7204.3	30	0	1220.2	0.106				-1	 	0	78	583.3027523288862	1164.5909517245723	2	583.3038940429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8452	3416	11868
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11871	31.683	NaN	6704.6	30	0	2673.9	0.106	+			48709	VTTPPPLV	8	59	412.2491902273415	822.483827521483	2	412.2496032714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTTPPPLV_	ENSG00000167491|ENST00000683918|GATAD2A;GATAD2A|p.P366Tfs*74|1|0.48|ENSG00000167491|chr19:19498606-19498607|-/C|frameshift_variant;GATAD2A|p.R273Gfs*42|1|0.27|ENSG00000167491|chr19:19496107-19496107|C/-|frameshift_variant;nc|ENSG00000167491|Q86YP4-2|GATAD2A;nc|ENSG00000167491|Q86YP4|GATAD2A	50.0245360154114	0.5941082100236891	6				NaN	NaN	0	NaN	8453	3416	11868
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11872	31.685	NaN	6655.5	30	0	839.8	0.106	+			21947	KSAFLCGVMK	10	69	570.7980197650878	1139.5814865969755	2	570.7991943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_KSAFLC(Carbamidomethyl (C))GVMK_	ENSG00000125944|ENST00000302271|HNRNPR;ENSG00000135316|ENST00000369622|SYNCRIP;HNRNPR|p.L367Qfs*19|1|0.05|ENSG00000125944|chr1:23313620-23313621|-/TTTAATCTCT|frameshift_variant;HNRNPR|p.W594Gfs*15|1|0.23|ENSG00000125944|chr1:23310575-23310576|CA/-|frameshift_variant;nc|ENSG00000125944|O43390-2|HNRNPR;nc|ENSG00000125944|O43390-3|HNRNPR;nc|ENSG00000271793|O60506-2|SYNCRIP;nc|ENSG00000271793|O60506-3|SYNCRIP;nc|ENSG00000271793|O60506-4|SYNCRIP	58.62960593111931	0.3783037861296717	6				NaN	NaN	0	NaN	8454	3416	11868
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11873	31.686	NaN	5702.2	30	0	532.79	0.106			+	24013	LEDLQQKQ	8	74	501.2663192031742	1000.5180854731484	2	501.2666931152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LEDLQQKQ_	REV__ENSG00000103494|ENST00000647211|RPGRIP1L;REV__ENST00000565343.1_1_16:53689488-53692740:-|nuORF;REV__nc|ENSG00000103494|Q68CZ1-2|RPGRIP1L;REV__RPGRIP1L|p.D821*|1|0.35|ENSG00000103494|chr16:53645847-53645848|-/A|frameshift_variant	49.44154591367651	0.597725784090933	6				NaN	NaN	0	NaN	8455	3416	11868
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11874	31.688	NaN	4590.7	30	0	339.01	0.035	+			51058	YLKCLHAM	8	71	489.7484350872153	NaN	0	489.74822998046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YLKCLHAM_	ENSG00000147251|ENST00000276202|DOCK11	41.20836394106077	1.7418937515398478	6				NaN	NaN	0	NaN	8456	3416	11868
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11875	31.689	NaN	4914.4	30	0	244.49	0.141	+			27598	MPMVTDNKM	9	75	533.7395792270386	1065.464605520877	2	533.7408447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MPMVTDNKM_	ENSG00000175054|ENST00000350721|ATR;nc|ENSG00000175054|Q13535-2|ATR;nc|ENSG00000175054|Q13535-3|ATR	85.16082228582465	0.07850854922700509	6				NaN	NaN	0	NaN	8457	3416	11868
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11893	31.728	NaN	28825	30	0	5102.8	0.214				-1	 	0	94	450.26285734118005	898.5111617491601	2	450.2633056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8472	3419	11892
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11894	31.732	NaN	16033	30	0	5865.3	0.106				-1	 	0	66	479.26047832535875	956.5064037175175	2	479.26104736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8473	3419	11892
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11895	31.734	NaN	9895.7	30	0	800.45	0.106	+			20125	KEKLQIVEM	9	74	559.3172555032017	1116.6199580732034	2	559.3184204101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEKLQIVEM_	ENSG00000149257|ENST00000358171|SERPINH1;ENST00000419794.1_1_9:34318953-34319253:+|nuORF;SERPINH1|p.E249K|1|0.25|ENSG00000149257|chr11:75568962-75568962|G/A|missense_variant	72.87924865735499	0.12833875048249987	6				NaN	NaN	0	NaN	8474	3419	11892
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11896	31.735	NaN	11301	30	0	2714.7	0.106	+			34840	RYPDSHQLF	9	78	581.7849108729318	1161.5552688126636	2	581.7857666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RYPDSHQLF_	ENSG00000138757|ENST00000359707|G3BP2;nc|ENSG00000138757|Q9UN86-2|G3BP2	72.87924865735499	0.12833875048249987	6				NaN	NaN	0	NaN	8475	3419	11892
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11897	31.737	NaN	26988	30	0	16527	0.106				-1	 	0	83	485.2709839674529	968.5274150017058	2	485.27130126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8476	3419	11892
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11898	31.739	NaN	5182.5	30	0	798.29	0.035			+	26414	LTESTDLRT	9	69	518.2687086203299	1034.5228643074597	2	518.270263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LTESTDLRT_	REV__ENST00000310823.7_1_2:9629156-9629234:-|nuORF	75.04331003522576	0.118981335847003	6				NaN	NaN	0	NaN	8477	3419	11892
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11899	31.74	NaN	12952	30	0	812.38	0.141			+	19880	KEEQWKKI	8	86	544.8076073240925	1087.6006617149849	2	544.8085327148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KEEQWKKI_	REV__ENST00000399586.2_1_X:74960734-74966719:-|nuORF	72.87924865735499	0.38290713436690915	6				NaN	NaN	0	NaN	8478	3419	11892
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11917	31.778	NaN	85780	30	0	19880	0.214				-1	 	0	93	382.56037813333603	1144.6593050002082	3	382.5606689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8493	3422	11916
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11918	31.782	NaN	18889	30	0	2866.2	0.106	+			19768	KEAERTAEL	9	82	523.7768790359403	1045.5392051386805	2	523.7778930664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEAERTAEL_	CEP290|p.E1553Kfs*4|1|0.52|ENSG00000198707|chr12:88084634-88084634|T/-|frameshift_variant;CEP290|p.I2385*|1|0.37|ENSG00000198707|chr12:88050410-88050410|T/-|frameshift_variant;CEP290|p.L2448Tfs*8|1|0.11|ENSG00000198707|chr12:88049282-88049283|-/T|frameshift_variant;CEP290|p.M1079Cfs*9|1|0.24|ENSG00000198707|chr12:88093844-88093844|T/-|frameshift_variant;CEP290|p.N882Ifs*10|1|0.2|ENSG00000198707|chr12:88106847-88106847|T/-|frameshift_variant;CEP290|p.R2306Nfs*40|1|0.14|ENSG00000198707|chr12:88055616-88055619|TCTC/-|frameshift_variant;ENSG00000198707|ENST00000552810|CEP290	77.31757898189308	0.1091473830098891	6				NaN	NaN	0	NaN	8494	3422	11916
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11919	31.784	NaN	10352	30	0	2731	0.106	+			24915	LKPTDSYSS	9	74	499.24555600998434	996.4765590867687	2	499.2460632324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LKPTDSYSS_	ENSG00000170537|ENST00000304381|TMC7;ENST00000568469.5_1_16:18995385-19051723:+|nuORF	44.116797842482775	0.37197099687881774	6				NaN	NaN	0	NaN	8495	3422	11916
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11920	31.786	NaN	17675	30	0	5495.9	0.106				-1	ASCPRSLRDT	10	75	388.19257926368925	1161.5559083912678	3	388.19281005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_ASC(Carbamidomethyl (C))PRSLRDT_	ENST00000335565.4_2_X:144903251-144903611:+|nuORF;ENST00000370490.1_1_X:144903476-144903611:+|nuORF	28.5767321226876	0.6464621404813697	6				NaN	NaN	0	NaN	8496	3422	11916
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11921	31.788	NaN	6624.8	30	0	1493.2	0.106			+	9211	EGRTKGIQSL	10	55	363.5408032241136	1087.6005802725408	3	363.54144287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EGRTKGIQSL_	REV__ENST00000526600.1_1_11:12960600-12960762:+|nuORF	35.17822180527639	0.5925517082438457	6				NaN	NaN	0	NaN	8497	3422	11916
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11922	31.789	NaN	4938.8	30	0	994.26	0.038			+	31579	QLRLEVTPSL	10	55	385.8956817472987	1154.6652158420961	3	385.8957824707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QLRLEVTPSL_	REV__CEP97|p.K618Nfs*15|1|0.41|ENSG00000182504|chr3:101762516-101762516|A/-|frameshift_variant;REV__ENSG00000182504|ENST00000341893|CEP97;REV__ENST00000489172.5_1_3:101443520-101477325:+|nuORF;REV__nc|ENSG00000182504|Q8IW35-2|CEP97	26.063383197487333	0.6669871633831898	6				NaN	NaN	0	NaN	8498	3422	11916
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11923	31.79	NaN	4563.1	30	0	2148.3	0.144	+			12637	GEIIQSVYEDL	11	60	422.54673867500816	1264.6183866252245	3	422.5471496582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GEIIQSVYEDL_	ENSG00000131473|ENST00000352035|ACLY;nc|ENSG00000131473|P53396-2|ACLY;nc|ENSG00000131473|P53396-3|ACLY	26.749707702089633	0.7092085788826945	6				NaN	NaN	0	NaN	8499	3422	11916
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11940	31.828	NaN	55639	30	0	5514.8	0.214	+			1222	AEQKVEYTL	9	100	540.781235451358	1079.547917969516	2	540.782470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEQKVEYTL_	ENSG00000114867|ENST00000346169|EIF4G1;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;ENST00000460829.5_1_3:184046782-184052693:+|nuORF;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1	101.45984612302182	0.0377122763612125	6				NaN	NaN	0	NaN	8513	3425	11939
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11941	31.832	NaN	43680	30	0	12651	0.106				-1	 	0	91	473.788891815793	945.5632306983861	2	473.78924560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8514	3425	11939
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11942	31.834	NaN	34009	30	0	5009.2	0.106	+			43435	TGLFFSHIVAA	11	90	388.2126675501687	1161.6161732507062	3	388.21429443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TGLFFSHIVAA_	ENST00000405201.5_1_12:124809292-124809376:-|nuORF	43.650786325866115	0.5079891456189096	6				NaN	NaN	0	NaN	8515	3425	11939
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11943	31.836	NaN	10650	30	0	4396.7	0.106				-1	 	0	54	345.8472122547471	1034.5198073644412	3	345.8477783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8516	3425	11939
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11944	31.837	NaN	6550.9	30	0	686.79	0.106			+	-1	EPFMMLPPP	9	76	545.752323757091	1089.4900945809818	2	545.7530517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Oxidation (M)	_EPFM(Oxidation (M))M(Oxidation (M))LPPP_	REV__ENSG00000163092|ENST00000409195|XIRP2;REV__nc|ENSG00000163092|A4UGR9-2|XIRP2;REV__nc|ENSG00000163092|A4UGR9-3|XIRP2;REV__nc|ENSG00000163092|A4UGR9|XIRP2;REV__XIRP2|p.N2647Ifs*6|2|0.26|ENSG00000163092|chr2:167249851-167249851|A/-|frameshift_variant	44.53106598305862	0.36711179743858174	6				NaN	NaN	0	NaN	8517	3425	11939
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11945	31.839	NaN	4508	30	0	318.64	0.033	+			7168	DAGIRAMD	8	58	432.6972531256993	863.3799533181987	2	432.69775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_DAGIRAM(Oxidation (M))D_	ENSG00000172915|ENST00000379939|NBEA;nc|ENSG00000172915|Q8NFP9-2|NBEA;nc|ENSG00000172915|Q8NFP9-3|NBEA;nc|ENSG00000172915|Q8NFP9|NBEA	79.45101966838831	0.3281480470254892	6				NaN	NaN	0	NaN	8518	3425	11939
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11946	31.84	NaN	14453	30	0	2018.8	0.14			+	28388	NELLRFQL	8	76	516.7946746070738	1031.5747962809476	2	516.795166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NELLRFQL_	REV__ENSG00000151790|ENST00000536354|TDO2	54.776311868738084	0.5534952410049249	6				NaN	NaN	0	NaN	8519	3425	11939
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11964	31.879	NaN	95834	30	0	6394.2	0.175	+			40657	SVAQVVLSR	9	107	479.78712075838945	957.5596885835789	2	479.7874755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVAQVVLSR_	ENSG00000165272|ENST00000297991|AQP3;ENST00000463983.5_1_9:33443205-33447528:-|nuORF;ENST00000493581.1_1_9:33443725-33447528:-|nuORF;nc|ENSG00000165272|Q92482-2|AQP3	102.0615471778698	0.03709830720253279	6				NaN	NaN	0	NaN	8534	3428	11963
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11965	31.882	NaN	52665	30	0	12051	0.106				-1	 	0	85	362.88126080562927	1085.621953017088	3	362.8816223144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8535	3428	11963
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11966	31.884	NaN	15283	30	0	3425.3	0.106	+			50838	YETKTALL	8	81	469.7624969244565	937.510440915713	2	469.7625732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YETKTALL_	ENSG00000100242|ENST00000689035|SUN2;nc|ENSG00000100242|Q9UH99-2|SUN2;nc|ENSG00000100242|Q9UH99-3|SUN2	71.87747018426188	0.391254423828572	6				NaN	NaN	0	NaN	8536	3428	11963
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11967	31.886	NaN	23212	30	0	2436.7	0.106			+	-1	FSSVCVSSLM	10	92	538.2447540114945	1074.4749550897889	2	538.2471923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_FSSVCVSSLM(Oxidation (M))_	REV__ENSG00000131398|ENST00000477616|KCNC3;REV__KCNC3|p.G627Efs*27|3|0.37|ENSG00000131398|chr19:50323073-50323073|C/-|frameshift_variant;REV__KCNC3|p.V354Cfs*74|1|0.26|ENSG00000131398|chr19:50323893-50323893|C/-|frameshift_variant	56.72105179125745	0.3956618550748046	6				NaN	NaN	0	NaN	8537	3428	11963
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11968	31.888	NaN	14490	30	0	2508	0.106	+			3468	ASSALFMAK	9	86	463.2433335409293	924.4721141486586	2	463.243896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASSALFMAK_	ENSG00000125651|ENST00000394456|GTF2F1;GTF2F1|p.E356G|1|0.16|ENSG00000125651|chr19:6381147-6381147|T/C|missense_variant	58.22992032128504	0.22837015374068087	6				NaN	NaN	0	NaN	8538	3428	11963
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11969	31.89	NaN	6332.4	30	0	1138.8	0.106	+			48579	VTQKTVPT	8	68	437.25493529212713	872.4953176510543	2	437.2552795410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTQKTVPT_	CASQ2|p.Q69Tfs*10|1|0.44|ENSG00000118729|chr1:115768337-115768338|-/T|frameshift_variant	68.78682469695295	0.41700713582915416	6				NaN	NaN	0	NaN	8539	3428	11963
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11970	31.891	NaN	10536	30	0	958.22	0.036			+	21494	KNKVNPTEAV	10	90	550.3080178034129	1098.6014826736257	2	550.3086547851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KNKVNPTEAV_	REV__ENSG00000143379|ENST00000692827|SETDB1;REV__nc|ENSG00000143379|Q15047-2|SETDB1;REV__nc|ENSG00000143379|Q15047-3|SETDB1;REV__nc|ENSG00000143379|Q15047|SETDB1	85.86182877749512	0.1547657473298402	6				NaN	NaN	0	NaN	8540	3428	11963
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11988	31.928	NaN	62799	30	0	8462.5	0.214	+			12672	GEITGEVHM	9	88	486.7254933180505	971.436433702901	2	486.7261047363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEITGEVHM_	ENSG00000136068|ENST00000295956|FLNB;ENST00000481470.5_1_3:58118395-58154450:+|nuORF;nc|ENSG00000136068|O75369-2|FLNB;nc|ENSG00000136068|O75369-3|FLNB;nc|ENSG00000136068|O75369-4|FLNB;nc|ENSG00000136068|O75369-5|FLNB;nc|ENSG00000136068|O75369-6|FLNB;nc|ENSG00000136068|O75369-7|FLNB;nc|ENSG00000136068|O75369-8|FLNB;nc|ENSG00000136068|O75369-9|FLNB	162.30552982961123	0.00408032636611507	6				NaN	NaN	0	NaN	8555	3431	11987
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11989	31.932	NaN	20398	30	0	2492.4	0.106	+			35474	SATETCYTY	9	84	548.2177729218063	1094.4209929104125	2	548.2189331054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SATETC(Carbamidomethyl (C))YTY_	ENSG00000132465|ENST00000254801|JCHAIN	138.8255168832474	0.011031062795199845	6				NaN	NaN	0	NaN	8556	3431	11987
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11990	31.934	NaN	9876.2	30	0	4938.9	0.106				-1	 	0	47	367.19712023834563	1098.5695313152369	3	367.1975402832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8557	3431	11987
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11991	31.936	NaN	14099	30	0	6273.5	0.106			+	19539	KCEEWLAMM	9	70	570.7483170716574	1139.4820812101148	2	570.749267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KCEEWLAMM_	REV__ENSG00000120885|ENST00000316403|CLU;REV__ENST00000522299.5_1_8:27457218-27472184:-|nuORF;REV__nc|ENSG00000120885|P10909-2|CLU;REV__nc|ENSG00000120885|P10909-4|CLU;REV__nc|ENSG00000120885|P10909-5|CLU;REV__nc|ENSG00000120885|P10909-6|CLU	42.86426827375447	0.38666266728046506	6				NaN	NaN	0	NaN	8558	3431	11987
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11992	31.937	NaN	5456.5	30	0	689.92	0.106			+	44222	TRPPGTIK	8	62	435.26321382749876	868.5118747217975	2	435.2633972167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TRPPGTIK_	REV__ENST00000439651.1_1_Y:3734542-3734659:-|nuORF	54.722347961057174	0.5540294759312786	6				NaN	NaN	0	NaN	8559	3431	11987
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11993	31.939	NaN	7813.2	30	0	1063.8	0.035			+	30122	PRQHPGGIW	9	74	524.2770716213936	1046.539590309587	2	524.2827758789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PRQHPGGIW_	REV__ENST00000381051.6_1_22:46493806-46501738:+|nuORF;REV__ENST00000435439.5_1_22:46493806-46505161:+|nuORF	57.81127852772723	0.2318599694398087	6				NaN	NaN	0	NaN	8560	3431	11987
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11994	31.94	NaN	5251.5	30	0	677.09	0.142				-1	GVLLSRMLLQ	10	78	573.336689730277	1144.658826527354	2	573.3377075195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_GVLLSRM(Oxidation (M))LLQ_	ENSG00000123989|ENST00000243776|CHPF;nc|ENSG00000123989|Q8IZ52-4|CHPF	32.81241826257853	0.6118718159329168	6				NaN	NaN	0	NaN	8561	3431	11987
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12011	31.978	NaN	202650	30	0	37856	0.16	+			42818	TEARFGAQL	9	99	496.760955267102	991.5073576010041	2	496.76141357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEARFGAQL_	CON__P08727;ENSG00000171345|ENST00000361566|KRT19	90.60085204095205	0.06317133949006545	6				NaN	NaN	0	NaN	8575	3434	12010
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12012	31.98	NaN	45377	30	0	6116.6	0.106	+			23778	LCLKWLPS	8	110	480.27304442201745	958.5315359108349	2	480.2735900878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LCLKWLPS_	ENST00000297578.8_1_8:104412404-104412587:-|nuORF	55.50420428727701	0.5462892107279674	6				NaN	NaN	0	NaN	8576	3434	12010
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12013	31.982	NaN	16267	30	0	7080.4	0.106				-1	ESGVEDCGRY	10	74	586.2372729470018	1170.4599929608034	2	586.2381591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_ESGVEDC(Carbamidomethyl (C))GRY_	ENSG00000156650|ENST00000287239|KAT6B;ENST00000490365.1_1_10:76737066-76741701:+|nuORF;KAT6B|p.K962Sfs*2|1|0.13|ENSG00000156650|chr10:75021146-75021146|A/-|frameshift_variant;KAT6B|p.L1460*|1|0.36|ENSG00000156650|chr10:75029198-75029198|T/-|frameshift_variant;KAT6B|p.R1133Gfs*12|1|0.07|ENSG00000156650|chr10:75024979-75024979|A/-|frameshift_variant;nc|ENSG00000156650|Q8WYB5-2|KAT6B;nc|ENSG00000156650|Q8WYB5-3|KAT6B	32.81241826257853	0.6118718159329168	6				NaN	NaN	0	NaN	8577	3434	12010
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12014	31.984	NaN	9057.3	30	0	4437.9	0.106			+	24517	LGKLHIKD	8	70	462.2867057220314	922.5588585108628	2	462.2868957519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LGKLHIKD_	REV__ENSG00000174010|ENST00000328046|KLHL15	51.33545320467046	0.5859736979383976	6				NaN	NaN	0	NaN	8578	3434	12010
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12015	31.986	NaN	10810	30	0	2008.4	0.106			+	45050	TVGLDKFTK	9	80	504.7891997218987	1007.5638465105974	2	504.789794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TVGLDKFTK_	REV__ENSG00000213782|ENST00000358007|DDX47;REV__ENST00000541537.5_1_12:12966301-12977638:+|nuORF;REV__ENST00000542123.5_1_12:12966301-12976268:+|nuORF;REV__ENST00000544032.5_1_12:12966301-12974356:+|nuORF;REV__ENST00000544497.1_1_12:12966301-12967184:+|nuORF;REV__ENST00000545038.5_1_12:12966301-12976268:+|nuORF;REV__nc|ENSG00000213782|Q9H0S4-2|DDX47	101.25262130126117	0.03792372629710479	6				NaN	NaN	0	NaN	8579	3434	12010
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12016	31.988	NaN	13326	30	0	2938.9	0.106	+			5442	ATYQTTLLH	9	76	524.2770716213936	1046.539590309587	2	524.2774047851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATYQTTLLH_	ENSG00000003147|ENST00000402384|ICA1;ENST00000562640.1_1_16:22010196-22010523:+|nuORF;ICA1|p.E307Lfs*26|1|0.05|ENSG00000003147|chr7:8141801-8141802|-/TTTTTCAA|frameshift_variant;nc|ENSG00000003147|Q05084-2|ICA1;nc|ENSG00000003147|Q05084-3|ICA1	145.15565482312357	0.00806134135205793	6				NaN	NaN	0	NaN	8580	3434	12010
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12017	31.99	NaN	9844.6	30	0	1200.7	0.033	+			640	AEAAQDATL	9	79	445.2163558479404	888.4181587626808	2	445.2168273925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AEAAQDATL_	ENSG00000109805|ENST00000251496|NCAPG	53.351449002276354	0.2690372970092375	6				NaN	NaN	0	NaN	8581	3434	12010
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12035	32.027	NaN	16976	30	0	3476.6	0.214	+			1142	AEMAQNAVRL	10	80	551.7864745524452	1101.5583961716902	2	551.7876586914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEMAQNAVRL_	ENSG00000168036|ENST00000349496|CTNNB1	143.37361013837676	0.009854612225601756	6				NaN	NaN	0	NaN	8596	3437	12034
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12036	32.031	NaN	22593	30	0	12582	0.106	+			32409	QVFKLGLAK	9	80	502.31785986661004	1002.6211668000201	2	502.3182678222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QVFKLGLAK_	ENSG00000170889|ENST00000302907|RPS9;ENST00000498085.1_1_19:50222822-50223059:-|nuORF	49.536043120802724	0.308405419312776	6				NaN	NaN	0	NaN	8597	3437	12034
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12037	32.033	NaN	13061	30	0	1220	0.106				-1	 	0	95	589.8147176541676	1177.614882375135	2	589.8156127929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8598	3437	12034
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12038	32.035	NaN	8944.8	30	0	1849	0.106	+			32953	REDDPVRML	9	75	565.7842151295271	1129.553877325854	2	565.78515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_REDDPVRML_	ENSG00000005700|ENST00000306270|IBTK;ENST00000369751.2_1_6:82901346-82950269:-|nuORF;IBTK|p.K1213Sfs*50|1|0.13|ENSG00000005700|chr6:82181966-82181966|T/-|frameshift_variant;IBTK|p.M1160*|1|0.13|ENSG00000005700|chr6:82191170-82191170|T/-|frameshift_variant;nc|ENSG00000005700|Q9P2D0-2|IBTK	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	8599	3437	12034
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12039	32.037	NaN	9548.5	30	0	1534.2	0.106	+			23732	LAWPAWLL	8	77	485.2802105729906	968.5458682127812	2	485.28973388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LAWPAWLL_	ENSG00000180902|ENST00000321264|D2HGDH;ENST00000463932.1_1_2:242674639-242675412:+|nuORF;nc|ENSG00000180902|Q8N465-2|D2HGDH;nc|ENSG00000180902|Q8N465-3|D2HGDH	43.626045697637714	0.6338121648150432	6				NaN	NaN	0	NaN	8600	3437	12034
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12040	32.038	NaN	11931	30	0	1671.3	0.036	+			5437	ATYPYQVVR	9	75	548.7922528604514	1095.5699527877027	2	548.7930908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATYPYQVVR_	ENSG00000164933|ENST00000297578|SLC25A32;ENST00000523701.1_1_8:104413742-104414267:-|nuORF	60.11826168202944	0.21262886028301267	6				NaN	NaN	0	NaN	8601	3437	12034
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12041	32.039	NaN	8920.9	30	0	1266.5	0.141	+			47270	VMSQALKATF	10	73	556.2933516018842	1110.5721502705683	2	556.2946166992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_VM(Oxidation (M))SQALKATF_	ENSG00000157557|ENST00000360938|ETS2	150.81021883065287	0.008351675499118036	6				NaN	NaN	0	NaN	8602	3437	12034
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12059	32.078	NaN	38622	30	0	5288.7	0.214	+			23331	KYSLIKGNF	9	87	535.3050165011659	1068.5954800691318	2	535.3060302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KYSLIKGNF_	ENSG00000143546|ENST00000368733|S100A8	141.52041321563706	0.009766778904176347	6				NaN	NaN	0	NaN	8617	3440	12058
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12060	32.082	NaN	42643	30	0	20956	0.106				-1	 	0	73	463.2161808799355	924.417808826671	2	463.2165222167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8618	3440	12058
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12061	32.084	NaN	21007	30	0	2598.8	0.106			+	6725	CAKLKKGL	8	82	430.77228541002336	859.5300178868467	2	430.77288818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_CAKLKKGL_	REV__BRIP1|p.I504Nfs*7|1|0.53|ENSG00000136492|chr17:61784387-61784388|-/T|frameshift_variant;REV__ENSG00000136492|ENST00000259008|BRIP1;REV__nc|ENSG00000136492|Q9BX63-2|BRIP1	40.5726180659479	0.6527593143185008	6				NaN	NaN	0	NaN	8619	3440	12058
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12062	32.086	NaN	12675	30	0	5199	0.106	+			32370	QVAEIVSKY	9	80	518.7867940799619	1035.5590352267236	2	518.787841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QVAEIVSKY_	ENSG00000138448|ENST00000261023|ITGAV;ITGAV|p.G401Efs*13|1|0.4|ENSG00000138448|chr2:186646721-186646721|A/-|frameshift_variant;ITGAV|p.G561Dfs*2|4|0.23|ENSG00000138448|chr2:186656358-186656358|G/-|frameshift_variant;ITGAV|p.V806Hfs*11|1|0.07|ENSG00000138448|chr2:186667758-186667759|-/CATTTTCAAAA|frameshift_variant;nc|ENSG00000138448|P06756-2|ITGAV;nc|ENSG00000138448|P06756-3|ITGAV	128.60217544463768	0.015992218256422188	6				NaN	NaN	0	NaN	8620	3440	12058
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12063	32.088	NaN	12145	30	0	1051.7	0.106			+	22850	KVIKMLGAI	9	89	486.81670723017015	971.6188615271403	2	486.81707763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KVIKMLGAI_	REV__ENSG00000151500|ENST00000341541|THYN1;REV__ENST00000533975.1_1_11:134119036-134122923:-|nuORF;REV__nc|ENSG00000151500|Q9P016-2|THYN1;REV__THYN1|p.N194Ifs*15|2|0.22|ENSG00000151500|chr11:134248859-134248859|T/-|frameshift_variant	44.116797842482775	0.37197099687881774	6				NaN	NaN	0	NaN	8621	3440	12058
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12064	32.089	NaN	10704	30	0	1864.8	0.038	+			14123	GSLRDSALFVK	11	73	398.22745316583297	1191.660530097699	3	398.22760009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GSLRDSALFVK_	ENSG00000179604|ENST00000335793|CDC42EP4	63.69406221917213	0.2904805327065929	6				NaN	NaN	0	NaN	8622	3440	12058
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12065	32.09	NaN	6012.7	30	0	925.13	0.137				-1	 	0	67	421.75223036057633	841.4899077879527	2	421.7525329589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8623	3440	12058
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12083	32.13	NaN	54772	30	0	9322.4	0.214	+			26443	LTGPVMPVR	9	91	485.2802105729906	968.5458682127812	2	485.281005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LTGPVMPVR_	ENSG00000167526|ENST00000311528|RPL13;ENST00000399461.8_1_16:89627605-89629447:+|nuORF;ENST00000484610.5_1_16:89627907-89629447:+|nuORF;ENST00000570149.1_1_16:89628679-89629447:+|nuORF;nc|ENSG00000167526|P26373-2|RPL13	113.41158876095287	0.025516849225023126	6				NaN	NaN	0	NaN	8638	3443	12082
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12084	32.133	NaN	30920	30	0	6217.7	0.106				-1	 	0	82	382.56037813333603	1144.6593050002082	3	382.56072998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8639	3443	12082
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12085	32.135	NaN	27323	30	0	4989.8	0.106	+			12976	GETKMVETAL	10	84	539.7754093997636	1077.536265866327	2	539.7764282226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GETKMVETAL_	ENSG00000132465|ENST00000254801|JCHAIN	84.81729255234993	0.1607459278640679	6				NaN	NaN	0	NaN	8640	3443	12082
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12086	32.137	NaN	68933	30	0	24460	0.106			+	-1	TSTRMLKK	8	94	327.5240362374085	979.5502793124256	3	327.5247497558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_TSTRM(Oxidation (M))LKK_	REV__ENSG00000214717|ENST00000652001|ZBED1	37.81151784470057	0.6698925118251505	6				NaN	NaN	0	NaN	8641	3443	12082
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12087	32.139	NaN	11846	30	0	1283.5	0.106			+	15714	GVQGRTRAKKR	11	85	419.59380876746695	1255.7595969026008	3	419.5942077636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GVQGRTRAKKR_	REV__CON__ENSEMBL:ENSBTAP00000007350;REV__CON__P01030	47.227680397652996	0.4590463137409202	6				NaN	NaN	0	NaN	8642	3443	12082
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12088	32.141	NaN	12061	30	0	1520.9	0.035	+			25434	LPNNAKLEM	9	85	515.2728291681553	1028.5311054031106	2	515.27392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LPNNAKLEM_	ENSG00000169696|ENST00000306739|ASPSCR1;nc|ENSG00000169696|Q9BZE9-2|ASPSCR1	93.1432384553994	0.056003526918089595	6				NaN	NaN	0	NaN	8643	3443	12082
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12089	32.141	NaN	13388	30	0	1759.8	0.14	+			13151	GGPVPSPQTY	10	79	501.7477016898454	1001.4808504464909	2	501.7481994628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GGPVPSPQTY_	nc|ENSG00000288701|Q5JSZ5-2|PRRC2B;nc|ENSG00000288701|Q5JSZ5-3|PRRC2B;nc|ENSG00000288701|Q5JSZ5-4|PRRC2B;nc|ENSG00000288701|Q5JSZ5-5|PRRC2B;nc|ENSG00000288701|Q5JSZ5|PRRC2B	41.42661286455405	0.5359995577334734	6				NaN	NaN	0	NaN	8644	3443	12082
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12107	32.179	NaN	32113	30	0	5074.3	0.214				-1	 	0	82	492.7948628950246	983.5751728568492	2	492.7952880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8659	3446	12106
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12108	32.183	NaN	12326	30	0	1569	0.106			+	-1	VVLVKLWM	8	74	502.304141519216	1002.593730105232	2	502.30462646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_VVLVKLWM(Oxidation (M))_	REV__ENST00000267339.6_1_13:111531406-111531613:-|nuORF	37.028477286268924	0.6747514403204248	6				NaN	NaN	0	NaN	8660	3446	12106
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12109	32.185	NaN	15819	30	0	1875.3	0.106	+			10547	EYAKIEETM	9	89	557.2595116610568	1112.5044703889134	2	557.2605590820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EYAKIEETM_	CADPS2|p.D1011Nfs*3|1|0.04|ENSG00000081803|chr7:122388716-122388717|-/ATGTATT|frameshift_variant;CADPS2|p.N1185Tfs*15|1|0.4|ENSG00000081803|chr7:122345632-122345632|T/-|frameshift_variant;ENSG00000081803|ENST00000449022|CADPS2;nc|ENSG00000081803|Q86UW7-2|CADPS2;nc|ENSG00000081803|Q86UW7-3|CADPS2	171.38481719736927	0.0025305361306121837	6				NaN	NaN	0	NaN	8661	3446	12106
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12110	32.187	NaN	14226	30	0	1714.8	0.106	+			24125	LEKSMEPSL	9	78	517.264711622275	1032.5148703113498	2	517.2655029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LEKSMEPSL_	ENSG00000123338|ENST00000293373|NCKAP1L;ENST00000547500.1_1_12:54891564-54894436:+|nuORF;NCKAP1L|p.L134Sfs*11|1|0.04|ENSG00000123338|chr12:54508424-54508425|-/AGTGCTCAATATATTCCGAGTGAATCTAT|frameshift_variant	138.06239232086	0.011389075116295402	6				NaN	NaN	0	NaN	8662	3446	12106
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12111	32.189	NaN	8940.1	30	0	2304.4	0.106	+			18883	IVIELGTNP	9	72	478.27553785532945	954.5365227774589	2	478.2762451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IVIELGTNP_	ENSG00000011465|ENST00000052754|DCN	42.396135135203025	0.392153681582562	6				NaN	NaN	0	NaN	8663	3446	12106
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12112	32.19	NaN	9494.2	30	0	578.07	0.037	+			6531	AYENKGKIAQ	10	89	561.3019226089481	1120.589292284696	2	561.302978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AYENKGKIAQ_	ENSG00000012963|ENST00000013070|UBR7	75.04331003522576	0.23611669241777622	6				NaN	NaN	0	NaN	8664	3446	12106
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12113	32.191	NaN	5217.5	30	0	511.46	0.14				-1	 	0	65	433.7612986455474	865.5080443578948	2	433.76171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8665	3446	12106
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12131	32.229	NaN	51545	30	0	16229	0.214	+			15150	GTSELLLAK	9	94	466.27621632910837	930.5378797250168	2	466.2765197753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTSELLLAK_	ASAP1|p.P792Lfs*20|1|0.1|ENSG00000153317|chr8:130112120-130112120|G/-|frameshift_variant;ASAP2|p.H548Qfs*57|1|0.14|ENSG00000151693|chr2:9374842-9374842|C/-|frameshift_variant;ASAP2|p.L787Afs*16|1|0.31|ENSG00000151693|chr2:9388513-9388514|-/C|frameshift_variant;ENSG00000151693|ENST00000281419|ASAP2;ENSG00000153317|ENST00000518721|ASAP1;nc|ENSG00000151693|O43150-2|ASAP2;nc|ENSG00000153317|Q9ULH1-2|ASAP1	104.0567914643314	0.03506238181059741	6				NaN	NaN	0	NaN	8680	3449	12130
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12132	32.233	NaN	14942	30	0	2754.4	0.106				-1	 	0	72	448.74493351448194	895.4753140957639	2	448.7452697753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8681	3449	12130
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12133	32.235	NaN	12363	30	0	1015.4	0.106	+			10779	FAGPCKVI	8	77	446.2405658066046	890.4665786800092	2	446.2411804199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_FAGPC(Carbamidomethyl (C))KVI_	ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC;PRKDC|p.D2437Wfs*3|1|0.11|ENSG00000253729|chr8:47840161-47840162|-/CA|frameshift_variant;PRKDC|p.E1557Sfs*16|1|0.16|ENSG00000253729|chr8:47886051-47886051|C/-|frameshift_variant;PRKDC|p.G1227Vfs*50|2|0.31|ENSG00000253729|chr8:47893306-47893306|C/-|frameshift_variant;PRKDC|p.K3681Nfs*6|1|0.32|ENSG00000253729|chr8:47785174-47785177|TTCT/-|frameshift_variant;PRKDC|p.M3670*|1|0.5|ENSG00000253729|chr8:47785212-47785212|T/-|frameshift_variant;PRKDC|p.M3846Cfs*12|1|0.13|ENSG00000253729|chr8:47779047-47779047|T/-|frameshift_variant;PRKDC|p.M4020Cfs*2|1|0.31|ENSG00000253729|chr8:47776968-47776968|T/-|frameshift_variant;PRKDC|p.N3605Kfs*3|1|0.22|ENSG00000253729|chr8:47788993-47788994|-/T|frameshift_variant;PRKDC|p.N4037Ifs*15|1|0.17|ENSG00000253729|chr8:47776916-47776916|T/-|frameshift_variant;PRKDC|p.R2704Gfs*13|2|0.34|ENSG00000253729|chr8:47834238-47834238|T/-|frameshift_variant;PRKDC|p.S3402Ifs*16|1|0.04|ENSG00000253729|chr8:47799302-47799303|-/AAACCGTGAGTTAGAGGAGGTAA|frameshift_variant;PRKDC|p.S4099Qfs*6|1|0.25|ENSG00000253729|chr8:47774265-47774265|A/-|frameshift_variant;PRKDC|p.T3268Pfs*7|1|0.5|ENSG00000253729|chr8:47803426-47803426|T/-|frameshift_variant;PRKDC|p.W3401Cfs*4|1|0.01|ENSG00000253729|chr8:47799304-47799305|-/AATGAATA|frameshift_variant	65.89745868150666	0.44339748671293633	6				NaN	NaN	0	NaN	8682	3449	12130
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12134	32.237	NaN	12313	30	0	970.52	0.106	+			3783	ATAEVLNIGK	10	89	508.29309159527526	NaN	0	508.2929382324219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATAEVLNIGK_	ENSG00000128050|ENST00000512576|PAICS;ENST00000510584.1_1_4:57302478-57308067:+|nuORF;nc|ENSG00000128050|P22234-2|PAICS	145.46060221211434	0.0031588751153696663	6				NaN	NaN	0	NaN	8683	3449	12130
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12135	32.238	NaN	9719.9	30	0	1987.3	0.106				-1	 	0	68	440.74754773057174	879.4805425279435	2	440.7477111816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8684	3449	12130
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12136	32.24	NaN	9077.7	30	0	1144.7	0.033				-1	 	0	74	451.2343643458873	900.4541757585746	2	451.23455810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8685	3449	12130
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12137	32.241	NaN	5975.9	30	0	1093.9	0.138	+			49998	WANVGKSL	8	72	437.74226865079044	873.4699843683809	2	437.7425842285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_WANVGKSL_	ENSG00000109452|ENST00000262992|INPP4B;ENST00000512630.5_1_4:143007384-143094853:-|nuORF	82.24051045832904	0.30490469762271794	6				NaN	NaN	0	NaN	8686	3449	12130
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12155	32.28	NaN	26120	30	0	14717	0.214	+			31232	QGYDKIIFK	9	63	556.31062401197	1110.60669509074	2	556.3115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QGYDKIIFK_	ENSG00000095110|ENST00000534921|NXPE1;nc|ENSG00000095110|Q8N323-2|NXPE1;NXPE1|p.E304Gfs*35|1|0.11|ENSG00000095110|chr11:114523075-114523076|TT/-|frameshift_variant	74.1650062923329	0.12277912660386392	6				NaN	NaN	0	NaN	8701	3452	12154
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12156	32.284	NaN	9271.3	30	0	1444.1	0.106				-1	LEYAVCLW	8	79	527.2580515034967	1052.5015500737934	2	527.2590942382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LEYAVC(Carbamidomethyl (C))LW_	ENST00000566111.5_1_1:158969765-158970002:+|nuORF	77.94384346573518	0.3407065481025094	6				NaN	NaN	0	NaN	8702	3452	12154
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12157	32.286	NaN	14209	30	0	2886.8	0.106	+			15263	GTTHLKPYVF	10	79	388.2126675501687	1161.6161732507062	3	388.545166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTTHLKPYVF_	UGT3A2|p.A468T|1|0.28|ENSG00000168671|chr5:36035868-36035868|C/T|missense_variant	42.86426827375447	0.522752283233888	6				NaN	NaN	0	NaN	8703	3452	12154
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12158	32.288	NaN	8721.6	30	0	1072.1	0.106	+			20094	KEKITPLTL	9	75	521.8292903441386	NaN	0	521.8294677734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEKITPLTL_	ENSG00000112773|ENST00000320172|TENT5A;nc|ENSG00000112773|Q96IP4-2|TENT5A	124.08010499294276	0.0015010289275841425	6				NaN	NaN	0	NaN	8704	3452	12154
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12159	32.289	NaN	8509.9	30	0	1221.5	0.106	+			29275	NYGPMKGGSF	10	74	529.2414145351742	1056.4682761371482	2	529.242431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NYGPMKGGSF_	ENSG00000170144|ENST00000392524|HNRNPA3;ENST00000451198.2_1_20:35249346-35249823:+|nuORF;ENST00000472163.1_1_3:75263799-75264780:+|nuORF;nc|ENSG00000170144|P51991-2|HNRNPA3	52.936696900407355	0.4300801048568001	6				NaN	NaN	0	NaN	8705	3452	12154
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12160	32.291	NaN	4535.8	30	0	416.92	0.036	+			10280	ETLTMATVCL	10	72	541.269188546544	1080.523824159888	2	541.2703247070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ETLTMATVCL_	ENSG00000138246|ENST00000260818|DNAJC13	66.42927471994793	0.3073667423445326	6				NaN	NaN	0	NaN	8706	3452	12154
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12161	32.292	NaN	4265.9	30	0	277.22	0.14				-1	SDLKVIVM	8	70	460.7587557438706	919.5029585545412	2	460.7594909667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_SDLKVIVM(Oxidation (M))_	ENSG00000109606|ENST00000336812|DHX15	60.97194046774394	0.49215940876911696	6				NaN	NaN	0	NaN	8707	3452	12154
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12179	32.331	NaN	220530	30	0	51374	0.214	+			6150	AVQEFGLAR	9	99	495.771827480428	989.529102027656	2	495.7720031738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVQEFGLAR_	ENSG00000169230|ENST00000303204|PRELID1;nc|ENSG00000169230|Q9Y255-2|PRELID1	195.04605151776784	5.427472092243166E-05	6				NaN	NaN	0	NaN	8722	3455	12178
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12180	32.335	NaN	19061	30	0	1926.2	0.106	+			16317	HEIEALKSF	9	94	537.2844609937465	1072.554369054293	2	537.2852172851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HEIEALKSF_	ENSG00000078618|ENST00000352171|NRDC;nc|ENSG00000078618|O43847-2|NRDC	155.5846463517096	0.005567437401040498	6				NaN	NaN	0	NaN	8723	3455	12178
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12181	32.337	NaN	10487	30	0	1280.2	0.106	+			28424	NETVAIHSL	9	77	492.2607494725925	NaN	0	492.2610778808594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NETVAIHSL_	ENSG00000082269|ENST00000418814|FAM135A;FAM135A|p.N1165Ifs*3|1|0.07|ENSG00000082269|chr6:70526577-70526578|-/T|frameshift_variant;FAM135A|p.N999Ifs*5|1|0.39|ENSG00000082269|chr6:70526073-70526073|A/-|frameshift_variant;FAM135A|p.N999Kfs*2|1|0.18|ENSG00000082269|chr6:70526072-70526073|-/A|frameshift_variant;nc|ENSG00000082269|Q9P2D6-2|FAM135A;nc|ENSG00000082269|Q9P2D6-3|FAM135A;nc|ENSG00000082269|Q9P2D6-4|FAM135A	150.36159442982594	0.0026033977239465623	6				NaN	NaN	0	NaN	8724	3455	12178
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12182	32.339	NaN	8733.4	30	0	739.26	0.106				-1	 	0	79	472.27300918856895	471.26573272196896	1	472.2769775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8725	3455	12178
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12183	32.341	NaN	10313	30	0	1002.1	0.106	+			27612	MPNSPAPHF	9	77	499.230854413305	996.44715589341	2	499.2310791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MPNSPAPHF_	ENSG00000112297|ENST00000633556|CRYBG1;nc|ENSG00000112297|Q9Y4K1-1|CRYBG1	87.69643885390035	0.07135982304947239	6				NaN	NaN	0	NaN	8726	3455	12178
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12184	32.342	NaN	8855.9	30	0	2714.8	0.039	+			35574	SAYFAEKLYK	10	61	407.21647023828183	1218.6275813150455	3	407.2165832519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SAYFAEKLYK_	ENSG00000196975|ENST00000394295|ANXA4;ENST00000471395.1_1_2:70045687-70052644:+|nuORF;ENST00000477632.5_1_2:70037634-70052644:+|nuORF;nc|ENSG00000196975|P09525-2|ANXA4;nc|ENSG00000196975|P09525|ANXA4	32.75053402867276	0.6123771875927935	6				NaN	NaN	0	NaN	8727	3455	12178
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12185	32.343	NaN	6409.7	30	0	1045.7	0.138				-1	 	0	65	441.773392182999	881.532231432798	2	441.7738037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8728	3455	12178
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12203	32.381	NaN	11579	30	0	2017.8	0.214			+	19820	KEDLFIRDG	9	76	546.7874643984463	1091.5603758636926	2	546.7886352539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEDLFIRDG_	REV__tr|U7SJ90|U7SJ90_FUSNUtRNA(Ile)-lysidinesynthaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=tilSPE=3SV=1	88.17693792209575	0.07000514020414955	6				NaN	NaN	0	NaN	8743	3458	12202
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12204	32.384	NaN	9955.4	30	0	1356.9	0.106	+			32914	RDVIMREF	8	84	533.2788017351654	1064.5430505371307	2	533.2802124023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RDVIMREF_	ENSG00000156976|ENST00000323963|EIF4A2;ENSG00000161960|ENST00000293831|EIF4A1;ENST00000461021.1_1_3:186505247-186505672:+|nuORF;ENST00000468362.5_1_3:186503755-186505556:+|nuORF;ENST00000485101.5_1_3:186505247-186505556:+|nuORF;ENST00000492144.5_1_3:186503809-186505672:+|nuORF;ENST00000494445.1_1_3:186505247-186506105:+|nuORF;ENST00000578324.5_1_17:7477602-7481249:+|nuORF;ENST00000581544.5_1_17:7477924-7481249:+|nuORF;ENST00000581621.1_1_17:7476159-7481249:+|nuORF;ENST00000581808.1_1_17:7481021-7481457:+|nuORF;ENST00000587313.1_1_18:12913551-12913704:+|nuORF;nc|ENSG00000156976|Q14240-2|EIF4A2;nc|ENSG00000161960|P60842-2|EIF4A1	72.87924865735499	0.38290713436690915	6				NaN	NaN	0	NaN	8744	3458	12202
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12205	32.386	NaN	13430	30	0	2268.3	0.106			+	43704	TKLPRSPI	8	75	456.2868192459251	910.5590855586502	2	456.2874450683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TKLPRSPI_	REV__ENSG00000100288|ENST00000406938|CHKB;REV__ENST00000468532.5_1_22:51018168-51020803:-|nuORF;REV__ENST00000492556.5_1_22:51018168-51020414:-|nuORF	79.45101966838831	0.3281480470254892	6				NaN	NaN	0	NaN	8745	3458	12202
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12206	32.388	NaN	21834	30	0	4896.2	0.106	+			13712	GPTNVRIEY	9	98	524.7760547744288	1047.5375566156574	2	524.776123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GPTNVRIEY_	ENSG00000114737|ENST00000348721|CISH;ENST00000491847.1_1_3:50645040-50646098:-|nuORF;nc|ENSG00000114737|Q9NSE2-2|CISH;nc|ENSG00000114737|Q9NSE2-3|CISH	51.52775601994872	0.28504342437107444	6				NaN	NaN	0	NaN	8746	3458	12202
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12207	32.39	NaN	7431.9	30	0	1379.1	0.106	+			27811	MSKEQVEE	8	75	490.22343007043736	978.4323072076747	2	490.2236633300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MSKEQVEE_	ENSG00000141013|ENST00000268699|GAS8;nc|ENSG00000141013|O95995-2|GAS8	71.87747018426188	0.391254423828572	6				NaN	NaN	0	NaN	8747	3458	12202
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12208	32.392	NaN	6845.6	30	0	763.71	0.106	+			44084	TPTKSFAVY	9	79	507.26870772204023	1012.5228625108805	2	507.26947021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TPTKSFAVY_	ENSG00000175895|ENST00000315367|PLEKHF2	49.536043120802724	0.308405419312776	6				NaN	NaN	0	NaN	8748	3458	12202
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12209	32.394	NaN	8561.7	30	0	1896	0.034	+			14537	GTDVASFVK	9	69	462.24486369181903	922.4751744504381	2	462.2450866699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GTDVASFVK_	ENSG00000108984|ENST00000590474|MAP2K6;ENST00000592348.1_1_17:67532232-67537891:+|nuORF;nc|ENSG00000108984|P52564-2|MAP2K6	82.7504851949679	0.08565546331141553	6				NaN	NaN	0	NaN	8749	3458	12202
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12228	32.431	NaN	60572	30	0	17437	0.214	+			14193	GSSAINILK	9	103	451.7690814932112	901.5236100532225	2	451.76885986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSSAINILK_	ENSG00000167522|ENST00000301030|ANKRD11;ENST00000330736.9_1_16:89334888-89371640:-|nuORF	77.31757898189308	0.1091473830098891	6				NaN	NaN	0	NaN	8765	3461	12227
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12229	32.435	NaN	24840	30	0	6755.7	0.106	+			3964	ATATLIIEH	9	86	484.7730926714614	NaN	0	484.7742919921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATATLIIEH_	ENSG00000100522|ENST00000216410|GNPNAT1;ENST00000553987.1_1_14:53248483-53250189:-|nuORF	172.03106254824962	0.009266854166643749	6				NaN	NaN	0	NaN	8766	3461	12227
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12230	32.437	NaN	12335	30	0	2951.1	0.106	+			35889	SEERVQVAL	9	76	515.7795447812733	1029.5445366293466	2	515.780517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEERVQVAL_	DYNC1H1|p.F2635Lfs*67|1|0.16|ENSG00000197102|chr14:102017141-102017141|T/-|frameshift_variant;DYNC1H1|p.G1902Vfs*27|2|0.27|ENSG00000197102|chr14:102006154-102006154|G/-|frameshift_variant;DYNC1H1|p.K3112Hfs*3|1|0.31|ENSG00000197102|chr14:102027998-102027999|-/TCACAAG|frameshift_variant;DYNC1H1|p.W4201Gfs*43|1|0.42|ENSG00000197102|chr14:102043958-102043958|G/-|frameshift_variant;ENSG00000197102|ENST00000360184|DYNC1H1	54.722347961057174	0.257609425301511	6				NaN	NaN	0	NaN	8767	3461	12227
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12231	32.439	NaN	19211	30	0	4623.8	0.106	+			13713	GPTNVRIEY	9	94	524.7760547744288	1047.5375566156574	2	524.7757568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GPTNVRIEY_	ENSG00000114737|ENST00000348721|CISH;ENST00000491847.1_1_3:50645040-50646098:-|nuORF;nc|ENSG00000114737|Q9NSE2-2|CISH;nc|ENSG00000114737|Q9NSE2-3|CISH	68.84614121027924	0.14577793175421136	6				NaN	NaN	0	NaN	8768	3461	12227
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12232	32.441	NaN	12667	30	0	2437.5	0.106				-1	 	0	76	543.8183903419159	1085.6222277506317	2	543.8197021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8769	3461	12227
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12233	32.442	NaN	16207	30	0	4272.3	0.035	+			46233	VEAVEQNTL	9	84	501.7585343943942	1001.5025158555884	2	501.7588806152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VEAVEQNTL_	ENSG00000142669|ENST00000270792|SH3BGRL3;ENST00000319041.6_1_1:26607416-26607611:+|nuORF	117.81106730687013	0.02252488733980868	6				NaN	NaN	0	NaN	8770	3461	12227
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12234	32.443	NaN	6581.3	30	0	671.71	0.138	+			46135	VDLSAPKV	8	71	414.74440318685254	827.4742534405051	2	414.74493408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VDLSAPKV_	AHNAK2|p.D1643Tfs*9|1|0.12|ENSG00000185567|chr14:104950524-104950524|C/-|frameshift_variant;AHNAK2|p.D4448Gfs*6|1|0.2|ENSG00000185567|chr14:104942108-104942109|-/C|frameshift_variant;AHNAK2|p.E5149Gfs*8|1|0.32|ENSG00000185567|chr14:104940005-104940006|-/C|frameshift_variant;AHNAK2|p.E5446Gfs*7|1|0.32|ENSG00000185567|chr14:104939114-104939115|-/C|frameshift_variant;AHNAK2|p.L4206Cfs*19|1|0.12|ENSG00000185567|chr14:104942835-104942835|G/-|frameshift_variant;AHNAK2|p.P2536Lfs*14|1|0.11|ENSG00000185567|chr14:104947844-104947844|G/-|frameshift_variant;ENSG00000185567|ENST00000333244|AHNAK2;nc|ENSG00000185567|Q8IVF2-3|AHNAK2	64.20726635412375	0.4601301477144759	6				NaN	NaN	0	NaN	8771	3461	12227
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12252	32.483	NaN	47214	30	0	13011	0.214	+			3278	ASLPLAVTK	9	90	450.281112700648	898.547672468096	2	450.2813720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASLPLAVTK_	ENSG00000160796|ENST00000450053|NBEAL2;nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2;nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2	89.02883481214508	0.06760336634167786	6				NaN	NaN	0	NaN	8786	3464	12251
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12253	32.486	NaN	36049	30	0	5824.7	0.106	+			2816	ASAAAALVLK	10	88	457.7865292652793	913.5585055973586	2	457.7868957519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASAAAALVLK_	ENSG00000137076|ENST00000314888|TLN1;nc|ENSG00000137076|Q9Y490-2|TLN1;TLN1|p.P1628Rfs*20|1|0.44|ENSG00000137076|chr9:35707144-35707144|G/-|frameshift_variant	101.25262130126117	0.07397688119410509	6				NaN	NaN	0	NaN	8787	3464	12251
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12254	32.488	NaN	33071	30	0	5881.4	0.106				-1	 	0	86	470.79432171138814	939.5740904895763	2	470.7945251464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8788	3464	12251
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12255	32.49	NaN	25313	30	0	4199	0.106			+	9585	ELKEGAQALL	10	84	536.305398142257	1070.596243351314	2	536.3060913085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ELKEGAQALL_	REV__ARSJ|p.F197Lfs*54|1|0.26|ENSG00000180801|chr4:113903483-113903483|A/-|frameshift_variant;REV__ARSJ|p.N431Kfs*53|1|0.24|ENSG00000180801|chr4:113902781-113902782|-/T|frameshift_variant;REV__ARSJ|p.N431Mfs*86|1|0.09|ENSG00000180801|chr4:113902782-113902782|T/-|frameshift_variant;REV__ARSJ|p.P469Lfs*48|1|0.31|ENSG00000180801|chr4:113902668-113902668|G/-|frameshift_variant;REV__ENSG00000180801|ENST00000315366|ARSJ;REV__ENST00000503013.2_1_4:114891653-114899990:-|nuORF	109.43880257439609	0.049666173740610824	6				NaN	NaN	0	NaN	8789	3464	12251
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12256	32.492	NaN	8826.7	30	0	2191.3	0.106				-1	 	0	66	478.27101366967355	954.5274744061471	2	478.2713623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8790	3464	12251
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12257	32.494	NaN	28464	30	0	8851.8	0.035	+			45042	TVGEVFYTK	9	87	522.273387060807	1042.5322211884138	2	522.274169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TVGEVFYTK_	ENSG00000204385|ENST00000229729|SLC44A4;nc|ENSG00000204385|Q53GD3-3|SLC44A4;SLC44A4|p.F618Sfs*25|1|0.43|ENSG00000204385|chr6:31864889-31864889|A/-|frameshift_variant;SLC44A4|p.G398Afs*7|1|0.29|ENSG00000204385|chr6:31869197-31869197|G/-|frameshift_variant;SLC44A4|p.N144Kfs*55|2|0.31|ENSG00000204385|chr6:31874757-31874758|-/T|frameshift_variant;SLC44A4|p.S619Lfs*9|1|0.31|ENSG00000204385|chr6:31864888-31864889|-/A|frameshift_variant	112.10723106719422	0.02684780151337622	6				NaN	NaN	0	NaN	8791	3464	12251
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12258	32.494	NaN	12345	30	0	2544.7	0.139				-1	 	0	83	462.79689062078813	923.5792283083763	2	462.79718017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8792	3464	12251
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12276	32.533	NaN	20203	30	0	7402.1	0.214				-1	 	0	80	465.28646807354136	928.5583832138827	2	465.2868347167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8807	3467	12275
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12277	32.537	NaN	9751.7	30	0	1184.8	0.106	+			12807	GEMKGAIGL	9	69	438.23626021062665	NaN	0	438.2362060546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEMKGAIGL_	ENSG00000005020|ENST00000345317|SKAP2	110.11987700582712	0.00958887139988123	6				NaN	NaN	0	NaN	8808	3467	12275
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12278	32.539	NaN	7389.8	30	0	2895	0.106				-1	 	0	80	517.2752364566946	516.2679599900946	1	517.2753295898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8809	3467	12275
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12279	32.54	NaN	7853.6	30	0	759.12	0.106			+	20632	KGGGTEEAKAE	11	78	538.7644847942532	1075.5144166553064	2	538.7654418945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KGGGTEEAKAE_	REV__CUX1|p.E933Sfs*59|1|0.14|ENSG00000257923|chr7:102202089-102202089|C/-|frameshift_variant;REV__CUX1|p.I1081Sfs*39|2|0.46|ENSG00000257923|chr7:102227471-102227471|C/-|frameshift_variant;REV__ENSG00000257923|ENST00000292535|CUX1;REV__nc|ENSG00000257923|P39880-2|CUX1;REV__nc|ENSG00000257923|P39880-3|CUX1;REV__nc|ENSG00000257923|P39880-4|CUX1;REV__nc|ENSG00000257923|P39880-5|CUX1;REV__nc|ENSG00000257923|P39880-6|CUX1	61.691277971877994	0.30835813808799384	6				NaN	NaN	0	NaN	8810	3467	12275
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12280	32.542	NaN	8676.2	30	0	1450.4	0.106			+	11124	FFVQRMVV	8	81	513.2847462890163	1024.5549396448325	2	513.2850952148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FFVQRMVV_	REV__ENSG00000173083|ENST00000311412|HPSE;REV__HPSE|p.F532Lfs*2|1|0.17|ENSG00000173083|chr4:83295380-83295380|A/-|frameshift_variant;REV__nc|ENSG00000173083|Q9Y251-2|HPSE	35.200714571348534	0.6875396545722289	6				NaN	NaN	0	NaN	8811	3467	12275
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12281	32.544	NaN	21773	30	0	2006.1	0.036	+			6518	AYATHPFKF	9	87	541.2760595214788	1080.5375661097576	2	541.277099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AYATHPFKF_	ENSG00000111912|ENST00000392477|NCOA7;nc|ENSG00000111912|Q8NI08-2|NCOA7;nc|ENSG00000111912|Q8NI08-5|NCOA7;nc|ENSG00000111912|Q8NI08-7|NCOA7	110.11987700582712	0.028875675806141952	6				NaN	NaN	0	NaN	8812	3467	12275
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12282	32.545	NaN	8670.3	30	0	3894.5	0.145				-1	TVLRHLEKM	9	53	381.5498555520038	1141.6277372562115	3	381.55010986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_TVLRHLEKM(Oxidation (M))_	ENSG00000166532|ENST00000535829|RIMKLB;ENST00000408914.2_1_21:37422526-37423618:+|nuORF;nc|ENSG00000166532|Q9ULI2-2|RIMKLB	22.579656572578934	0.5922287541734749	6				NaN	NaN	0	NaN	8813	3467	12275
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12300	32.583	NaN	41203	30	0	4540.8	0.214				-1	 	0	87	475.2540756740503	948.4935984149006	2	475.25445556640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8828	3470	12299
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12301	32.587	NaN	13706	30	0	1469.3	0.106	+			27544	MPDHTDVSL	9	85	507.73100836892013	1013.4474638046403	2	507.7314758300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MPDHTDVSL_	ENSG00000138134|ENST00000371926|STAMBPL1;nc|ENSG00000138134|Q96FJ0-2|STAMBPL1;STAMBPL1|p.K405Rfs*21|3|0.43|ENSG00000138134|chr10:88922389-88922389|A/-|frameshift_variant	51.33545320467046	0.2872990594074956	6				NaN	NaN	0	NaN	8829	3470	12299
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12302	32.589	NaN	25282	30	0	3420.4	0.106				-1	 	0	79	527.7506606839198	1053.4867684346395	2	527.7515869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8830	3470	12299
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12303	32.591	NaN	10022	30	0	1070.1	0.106	+			2563	AQATISFPK	9	82	481.76861266558586	961.5226723979717	2	481.76849365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AQATISFPK_	CDC6|p.P86Lfs*17|1|0.14|ENSG00000094804|chr17:40291132-40291132|C/-|frameshift_variant;ENSG00000094804|ENST00000209728|CDC6	49.536043120802724	0.308405419312776	6				NaN	NaN	0	NaN	8831	3470	12299
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12304	32.593	NaN	10056	30	0	1189.2	0.106	+			23062	KVTLAEQDP	9	70	500.76958208333696	999.5246112334739	2	501.7769775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KVTLAEQDP_	ENSG00000146707|ENST00000310842|POMZP3;ENSG00000188372|ENST00000394857|ZP3;nc|ENSG00000188372|P21754-2|ZP3;nc|ENSG00000188372|P21754-3|ZP3	54.776311868738084	0.25715957988447635	6				NaN	NaN	0	NaN	8832	3470	12299
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12305	32.594	NaN	5953.7	30	0	657.67	0.034	+			12054	GAAAFIYEK	9	78	485.25385938975234	968.4931658463047	2	485.2554931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GAAAFIYEK_	ENSG00000002933|ENST00000004103|TMEM176A;ENST00000475007.5_1_7:150500316-150501569:+|nuORF;ENST00000481305.1_1_7:150500415-150501953:+|nuORF	77.31757898189308	0.1091473830098891	6				NaN	NaN	0	NaN	8833	3470	12299
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12306	32.595	NaN	8904.3	30	0	1066.9	0.141	+			51210	YPQPPSQSY	9	79	533.7453112037796	1065.476069474359	2	533.7460327148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YPQPPSQSY_	ENSG00000138279|ENST00000372921|ANXA7;nc|ENSG00000138279|P20073|ANXA7	52.936696900407355	0.27249468807391813	6				NaN	NaN	0	NaN	8834	3470	12299
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12324	32.633	NaN	21668	30	0	3083.2	0.214	+			189	AALDKATVL	9	93	451.27038925615545	NaN	0	451.2710266113281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AALDKATVL_	ENSG00000150593|ENST00000280154|PDCD4;ENST00000489049.5_1_10:112647518-112650449:+|nuORF;nc|ENSG00000150593|Q53EL6-2|PDCD4	109.47833844074708	0.010168233843482827	6				NaN	NaN	0	NaN	8849	3473	12323
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12325	32.637	NaN	17857	30	0	997.08	0.106	+			3164	ASINLNAINK	10	95	529.3031345801908	1056.5917162271815	2	529.3043212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASINLNAINK_	ENSG00000149925|ENST00000642816|ALDOA;ENST00000398050.3_1_10:127355642-127355750:-|nuORF;nc|ENSG00000149925|P04075|ALDOA	157.3448221729694	0.007191409758142479	6				NaN	NaN	0	NaN	8850	3473	12323
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12326	32.639	NaN	10719	30	0	696.33	0.106	+			18252	IPARIVTNY	9	76	523.8020467172017	1045.5895405012034	2	523.8034057617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IPARIVTNY_	ENSG00000124491|ENST00000264870|F13A1;F13A1|p.F340L|1|0.13|ENSG00000124491|chr6:6222125-6222125|G/T|missense_variant;F13A1|p.K505Sfs*9|1|0.34|ENSG00000124491|chr6:6174813-6174813|T/-|frameshift_variant;F13A1|p.V564Sfs*13|1|0.09|ENSG00000124491|chr6:6174637-6174637|C/-|frameshift_variant	68.84614121027924	0.14577793175421136	6				NaN	NaN	0	NaN	8851	3473	12323
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12327	32.641	NaN	11727	30	0	4916.4	0.106	+			13982	GSATSLVFK	9	72	455.25509687182233	908.4956408104447	2	455.25537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GSATSLVFK_	ENSG00000227345|ENST00000616448|PARG;PARG|p.D904Tfs*4|1|0.16|ENSG00000227345|chr10:49820231-49820231|C/-|frameshift_variant;PARG|p.N277Mfs*5|3|0.4|ENSG00000227345|chr10:49933618-49933618|T/-|frameshift_variant	115.49404669440601	0.023927554121326553	6				NaN	NaN	0	NaN	8852	3473	12323
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12328	32.643	NaN	6759.1	30	0	839.17	0.106	+			13057	GEYRAVTEL	9	73	519.2662254128429	1036.5178978924857	2	519.2672119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GEYRAVTEL_	ENSG00000198502|ENST00000374975|HLA-DRB5	72.87924865735499	0.12833875048249987	6				NaN	NaN	0	NaN	8853	3473	12323
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12329	32.644	NaN	9263.6	30	0	2367.3	0.038	+			41265	SVLIQKQIFK	10	66	401.9200072417798	NaN	0	401.91998291015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVLIQKQIFK_	ENSG00000205339|ENST00000379719|IPO7;ENST00000528833.1_1_11:9431619-9435997:+|nuORF;IPO7|p.D430Mfs*6|1|0.18|ENSG00000205339|chr11:9425208-9425208|A/-|frameshift_variant;IPO7|p.M511Cfs*3|1|0.19|ENSG00000205339|chr11:9429134-9429134|A/-|frameshift_variant	56.43379154798735	0.2634004003759929	6				NaN	NaN	0	NaN	8854	3473	12323
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12330	32.645	NaN	3262.7	30	0	282.34	0.138				-1	ISAMGALSL	9	57	439.73428392161554	877.4540149100311	2	439.7344055175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_ISAM(Oxidation (M))GALSL_	ENSG00000187905|ENST00000442047|LRRC74B	49.44154591367651	0.3095138337212152	6				NaN	NaN	0	NaN	8855	3473	12323
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12348	32.689	NaN	17513	30	0	2646.9	0.214	+			28322	NEFTTHVM	8	84	489.72014118384396	977.425729434488	2	489.7209167480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NEFTTHVM_	ENSG00000167081|ENST00000373489|PBX3;ENSG00000185630|ENST00000420696|PBX1;ENSG00000204304|ENST00000375050|PBX2;ENST00000478678.5_1_6:32154995-32157692:-|nuORF;ENST00000538998.1_1_9:128606084-128725334:+|nuORF;nc|ENSG00000167081|P40426-2|PBX3;nc|ENSG00000167081|P40426-5|PBX3;nc|ENSG00000185630|P40424-2|PBX1;nc|ENSG00000185630|P40424-3|PBX1	102.7733458925114	0.2491487235419157	6				NaN	NaN	0	NaN	8870	3476	12347
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12349	32.692	NaN	8991.1	30	0	1212.2	0.106	+			6151	AVQEFGLAR	9	73	495.771827480428	989.529102027656	2	495.7718505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVQEFGLAR_	ENSG00000169230|ENST00000303204|PRELID1;nc|ENSG00000169230|Q9Y255-2|PRELID1	114.8945686534367	0.024290463251177924	6				NaN	NaN	0	NaN	8871	3476	12347
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12350	32.697	NaN	13856	30	0	1494.4	0.034	+			44280	TSALPIIQK	9	87	485.79973515192245	969.5849173706449	2	485.79998779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TSALPIIQK_	ENSG00000147872|ENST00000276914|PLIN2;ENST00000472715.1_1_9:19126103-19127487:-|nuORF;ENST00000475923.1_1_9:19126103-19126313:-|nuORF;PLIN2|p.V348*|1|0.15|ENSG00000147872|chr9:19116520-19116520|C/-|frameshift_variant	98.62937762414208	0.04060045538121712	6				NaN	NaN	0	NaN	8872	3476	12347
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12367	32.731	NaN	106460	30	0	7438	0.187			+	34539	RVIYKVWTQ	9	113	596.8459418100738	1191.6773306869475	2	596.8472290039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVIYKVWTQ_	REV__ENSG00000115009|ENST00000358813|CCL20;REV__nc|ENSG00000115009|P78556-2|CCL20	56.43379154798735	0.2433427591689151	6				NaN	NaN	0	NaN	8886	3479	12366
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12368	32.734	NaN	29082	30	0	4638.3	0.106	+			38835	SSNIFTVAK	9	81	483.76571158225056	965.5168702313011	2	483.7662048339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSNIFTVAK_	ENSG00000100280|ENST00000357586|AP1B1;ENST00000482818.1_1_22:29726183-29727937:-|nuORF;nc|ENSG00000100280|Q10567-2|AP1B1;nc|ENSG00000100280|Q10567-3|AP1B1;nc|ENSG00000100280|Q10567-4|AP1B1	142.36107225718385	0.009372392051035914	6				NaN	NaN	0	NaN	8887	3479	12366
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12369	32.736	NaN	65542	30	0	8420.4	0.106	+			34510	RVFVVGVGMTK	11	73	398.2335623830262	1191.6788577492787	3	398.2337951660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RVFVVGVGMTK_	ENSG00000116171|ENST00000371514|SCP2;ENST00000528311.5_1_1:53392996-53413692:+|nuORF;nc|ENSG00000116171|P22307-3|SCP2;nc|ENSG00000116171|P22307-7|SCP2;nc|ENSG00000116171|P22307-8|SCP2	79.03558427241974	0.16041291136517336	6				NaN	NaN	0	NaN	8888	3479	12366
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12370	32.738	NaN	18825	30	0	3607.8	0.106				-1	 	0	78	479.79951372772115	957.5844745222423	2	479.79998779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8889	3479	12366
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12371	32.74	NaN	21042	30	0	3488.4	0.106				-1	 	0	88	507.7714071555771	1013.5282613779542	2	507.7719421386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8890	3479	12366
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12372	32.742	NaN	10751	30	0	2140.6	0.106	+			21437	KNAVLEHME	9	85	535.767682574677	1069.520812216154	2	535.76904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KNAVLEHME_	ENSG00000184922|ENST00000331495|FMNL1;ENST00000587856.1_1_17:43311355-43318139:+|nuORF;nc|ENSG00000184922|O95466-2|FMNL1;nc|ENSG00000184922|O95466-3|FMNL1	56.72105179125745	0.24094814563026265	6				NaN	NaN	0	NaN	8891	3479	12366
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12373	32.743	NaN	8750.5	30	0	1369.4	0.036	+			17643	IEKELETVC	9	72	532.2705699076122	1062.5265868820243	2	532.2708740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IEKELETVC_	ENSG00000128245|ENST00000248975|YWHAH;ENST00000397492.1_1_22:32346295-32352776:+|nuORF	58.2462437865262	0.22823408064396822	6				NaN	NaN	0	NaN	8892	3479	12366
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12391	32.782	NaN	122390	30	0	42501	0.214	+			5153	ATSVITIVK	9	95	466.2941448103543	930.5737366875086	2	466.29443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSVITIVK_	ENSG00000197063|ENST00000357736|MAFG	154.1183686248401	0.005909203230691971	6				NaN	NaN	0	NaN	8907	3482	12390
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12392	32.785	NaN	30093	30	0	4279.8	0.106	+			36265	SENKLPAEL	9	89	500.76958208333696	999.5246112334739	2	500.7690734863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SENKLPAEL_	ENSG00000100823|ENST00000216714|APEX1;ENST00000557159.5_1_14:20924026-20925664:+|nuORF	101.45984612302182	0.0377122763612125	6				NaN	NaN	0	NaN	8908	3482	12390
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12393	32.787	NaN	20620	30	0	1228.1	0.106			+	13909	GRLDGGPFTL	10	91	516.7766699448804	NaN	0	516.776123046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GRLDGGPFTL_	REV__ENST00000264824.4_1_19:13212008-13213661:-|nuORF;REV__ENST00000590974.1_1_19:13211801-13213661:-|nuORF	62.107414245175825	0.217068727747531	6				NaN	NaN	0	NaN	8909	3482	12390
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12394	32.789	NaN	9723.8	30	0	1108.7	0.106	+			8464	EASGRIYVY	9	79	529.2686950586211	1056.5228371840421	2	529.2693481445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EASGRIYVY_	ENSG00000136237|ENST00000665637|RAPGEF5;nc|ENSG00000136237|Q92565|RAPGEF5	111.64827973302667	0.027316110422332632	6				NaN	NaN	0	NaN	8910	3482	12390
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12395	32.791	NaN	6281.8	30	0	653.5	0.106	+			50671	YEEEMREL	8	65	549.7426314075641	NaN	0	549.7424926757812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YEEEMREL_	ENSG00000026025|ENST00000544301|VIM;ENST00000485947.1_1_10:17271421-17272784:+|nuORF	42.86426827375447	1.7418937515398478	6				NaN	NaN	0	NaN	8911	3482	12390
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12396	32.793	NaN	6768.6	30	0	407.02	0.038				-1	NTHFMILEKG	10	82	402.5373125832114	1204.5901083498343	3	402.5373840332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_NTHFM(Oxidation (M))ILEKG_	ENSG00000176194|ENST00000320477|CIDEA	38.714083909724	0.5609941533943991	6				NaN	NaN	0	NaN	8912	3482	12390
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12397	32.794	NaN	5226.1	30	0	1495.4	0.142	+			45544	TYLDKIKKF	9	53	385.8970450722287	1154.6693058168862	3	385.89703369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TYLDKIKKF_	ENSG00000054654|ENST00000555002|SYNE2;nc|ENSG00000054654|Q8WXH0|SYNE2;SYNE2|p.A2565T|1|0.18|ENSG00000054654|chr14:64051606-64051606|G/A|missense_variant;SYNE2|p.A5240Qfs*5|1|0.07|ENSG00000054654|chr14:64152639-64152639|G/-|frameshift_variant;SYNE2|p.D3074Ffs*8|1|0.07|ENSG00000054654|chr14:64053132-64053133|-/TTTCTTTTTCAAATACTTG|frameshift_variant;SYNE2|p.F2840Lfs*3|1|0.38|ENSG00000054654|chr14:64052427-64052427|T/-|frameshift_variant;SYNE2|p.F4992Lfs*13|1|0.39|ENSG00000054654|chr14:64140067-64140067|T/-|frameshift_variant;SYNE2|p.L5308Ifs*18|1|0.12|ENSG00000054654|chr14:64158750-64158751|GG/-|frameshift_variant;SYNE2|p.S6651Rfs*83|1|0.29|ENSG00000054654|chr14:64220596-64220597|-/G|frameshift_variant	18.262085536374414	0.6112419832031293	6				NaN	NaN	0	NaN	8913	3482	12390
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12415	32.834	NaN	25398	30	0	4579	0.214	+			45331	TVSGIQVRY	9	95	511.7843783056033	1021.5542036780066	2	511.78497314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVSGIQVRY_	ENSG00000129354|ENST00000250244|AP1M2;nc|ENSG00000129354|Q9Y6Q5-2|AP1M2	148.98678547993487	0.0071052929883181565	6				NaN	NaN	0	NaN	8928	3485	12414
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12416	32.837	NaN	19842	30	0	3632.9	0.106				-1	 	0	86	543.8183903419159	1085.6222277506317	2	543.8193969726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8929	3485	12414
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12417	32.839	NaN	15577	30	0	3145.3	0.106				-1	 	0	79	478.27101366967355	954.5274744061471	2	478.2713623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8930	3485	12414
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12418	32.841	NaN	13860	30	0	1446.7	0.106				-1	MGKALWVI	8	77	488.2715419861017	974.5285310390034	2	488.2712097167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))M(Oxidation (M))GKALWVI_	ENST00000392882.6_1_14:100800994-100801027:-|nuORF	62.97842346883844	0.4722955155785405	6				NaN	NaN	0	NaN	8931	3485	12414
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12419	32.843	NaN	9917.4	30	0	1510	0.106	+			39811	STLESIYQR	9	74	548.784994222787	1095.5554355123738	2	548.7855834960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STLESIYQR_	ENSG00000166888|ENST00000300134|STAT6;ENST00000555641.1_1_12:57499966-57502061:-|nuORF;STAT6|p.G815Efs*27|3|0.31|ENSG00000166888|chr12:57096672-57096672|C/-|frameshift_variant	120.8684288430529	0.02067403653475984	6				NaN	NaN	0	NaN	8932	3485	12414
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12420	32.845	NaN	31092	30	0	17216	0.039	+			50305	WSQILMQKIF	10	74	431.9059127614512	1292.6959088845535	3	431.9062805175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_WSQILMQKIF_	ENST00000430767.8_1_17:75210398-75210464:+|nuORF	35.15202426646627	0.5927656479315102	6				NaN	NaN	0	NaN	8933	3485	12414
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12421	32.845	NaN	7744	30	0	1330.1	0.139	+			11082	FETKVTTL	8	67	469.7631571744846	937.5117614157692	2	469.76318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FETKVTTL_	ENSG00000165688|ENST00000371717|PMPCA;ENST00000371720.5_1_9:139305120-139310743:+|nuORF	77.31757898189308	0.345924878368729	6				NaN	NaN	0	NaN	8934	3485	12414
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12439	32.885	NaN	92708	30	0	13301	0.214				-1	 	0	92	453.7551467097731	905.4957404863462	2	453.7557678222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8949	3488	12438
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12440	32.889	NaN	21761	30	0	3000.7	0.106	+			10802	FAKGGNLTL	9	77	460.7627966548503	919.5110403765007	2	460.7635498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FAKGGNLTL_	ENSG00000035115|ENST00000356150|SH3YL1;ENST00000497051.5_1_2:233054-249752:-|nuORF;nc|ENSG00000035115|Q96HL8-2|SH3YL1;nc|ENSG00000035115|Q96HL8-3|SH3YL1;nc|ENSG00000035115|Q96HL8-4|SH3YL1	93.19546047674547	0.05585629608842056	6				NaN	NaN	0	NaN	8950	3488	12438
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12441	32.891	NaN	16482	30	0	4621.5	0.106	+			16241	HEEIAMATV	9	80	500.741761397119	999.468969861038	2	500.7423400878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HEEIAMATV_	ENSG00000149925|ENST00000642816|ALDOA;nc|ENSG00000149925|P04075|ALDOA	60.97194046774394	0.20551255781574032	6				NaN	NaN	0	NaN	8951	3488	12438
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12442	32.893	NaN	27326	30	0	13550	0.106	+			15013	GTNEFKFLK	9	63	361.86553676459425	1082.5747808939827	3	361.8659973144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTNEFKFLK_	ENSG00000112852|ENST00000194155|PCDHB2;ENSG00000113205|ENST00000231130|PCDHB3;ENSG00000113212|ENST00000231137|PCDHB7;ENSG00000120327|ENST00000239449|PCDHB14;ENSG00000187372|ENST00000341948|PCDHB13;nc|ENSG00000120327|Q9Y5E9-2|PCDHB14	37.15910966729921	0.4535818937225704	6				NaN	NaN	0	NaN	8952	3488	12438
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12443	32.894	NaN	12149	30	0	2001	0.106	+			47871	VSLGLAVSK	9	71	437.2734475935493	872.5323422538986	2	437.2738952636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSLGLAVSK_	ENSG00000018869|ENST00000586929|ZNF582;ENSG00000197302|ENST00000316491|KRBOX5;ENSG00000197566|ENST00000311331|ZNF624;ENST00000529943.6_1_16:31724760-31765604:+|nuORF;ENST00000534277.5_1_16:31724760-31767037:+|nuORF;ENST00000579983.1_1_17:16534952-16537956:-|nuORF;ZNF624|p.I325Nfs*9|1|0.21|ENSG00000197566|chr17:16623912-16623913|-/T|frameshift_variant;ZNF624|p.I325Sfs*167|1|0.46|ENSG00000197566|chr17:16623913-16623913|T/-|frameshift_variant;ZNF624|p.K498Nfs*74|1|0.49|ENSG00000197566|chr17:16623392-16623392|T/-|frameshift_variant;ZNF624|p.K666Nfs*130|1|0.46|ENSG00000197566|chr17:16622888-16622888|T/-|frameshift_variant;ZNF624|p.K787Ifs*14|1|0.11|ENSG00000197566|chr17:16622526-16622527|-/ATAAATGTAATGAA|frameshift_variant	114.8945686534367	0.024290463251177924	6				NaN	NaN	0	NaN	8953	3488	12438
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12444	32.896	NaN	8049.9	30	0	964.84	0.034			+	-1	IGAMTVAGII	10	73	481.27286903255043	960.5311851319009	2	481.27325439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_IGAM(Oxidation (M))TVAGII_	REV__ENSG00000144554|ENST00000675286|FANCD2;REV__FANCD2|p.I1249Nfs*2|1|0.48|ENSG00000144554|chr3:10090346-10090347|-/A|frameshift_variant;REV__FANCD2|p.N890Ifs*14|1|0.36|ENSG00000144554|chr3:10073312-10073312|A/-|frameshift_variant;REV__nc|ENSG00000144554|Q9BXW9-1|FANCD2;REV__nc|ENSG00000144554|Q9BXW9-3|FANCD2	71.29570347882199	0.26673431503403816	6				NaN	NaN	0	NaN	8954	3488	12438
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12445	32.897	NaN	4201.2	30	0	563.53	0.138	+			157	AAIEASQSL	9	72	445.2344638464659	888.4543747597319	2	445.2350769042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AAIEASQSL_	ENSG00000168297|ENST00000356151|PXK;nc|ENSG00000168297|Q7Z7A4-2|PXK;nc|ENSG00000168297|Q7Z7A4-4|PXK;nc|ENSG00000168297|Q7Z7A4-6|PXK	93.1432384553994	0.056003526918089595	6				NaN	NaN	0	NaN	8955	3488	12438
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12463	32.935	NaN	95917	30	0	9719.1	0.176	+			13001	GEVDPKVAL	9	87	464.26044714337763	926.5063413535553	2	464.2607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEVDPKVAL_	ENSG00000099795|ENST00000215565|NDUFB7;ENST00000593353.5_1_19:14676947-14682853:-|nuORF	104.0567914643314	0.03506238181059741	6				NaN	NaN	0	NaN	8970	3491	12462
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12464	32.938	NaN	8649.7	30	0	1308.2	0.106			+	50487	YALATSLQY	9	77	515.2657419942163	1028.5169310552326	2	515.2666625976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YALATSLQY_	REV__ENSG00000169398|ENST00000696786|PTK2;REV__nc|ENSG00000169398|Q05397-2|PTK2;REV__nc|ENSG00000169398|Q05397-3|PTK2;REV__nc|ENSG00000169398|Q05397-4|PTK2;REV__nc|ENSG00000169398|Q05397-5|PTK2;REV__nc|ENSG00000169398|Q05397-7|PTK2;REV__nc|ENSG00000169398|Q05397|PTK2;REV__PTK2|p.P912Lfs*17|2|0.43|ENSG00000169398|chr8:140668399-140668399|G/-|frameshift_variant	71.87747018426188	0.13267044672804276	6				NaN	NaN	0	NaN	8971	3491	12462
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12465	32.94	NaN	12385	30	0	1152.7	0.106	+			50422	YAATIASKL	9	74	469.27090270548075	936.5272524777615	2	469.2713317871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YAATIASKL_	ENSG00000102554|ENST00000377687|KLF5;nc|ENSG00000102554|Q13887-2|KLF5;nc|ENSG00000102554|Q13887-4|KLF5	117.81106730687013	0.02252488733980868	6				NaN	NaN	0	NaN	8972	3491	12462
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12466	32.942	NaN	26280	30	0	10777	0.106	+			12609	GEIASFDKAKL	11	86	393.55180310678327	1177.63357992055	3	393.5520324707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEIASFDKAKL_	ENSG00000034510|ENST00000233143|TMSB10	44.639436926238396	0.4944613868569842	6				NaN	NaN	0	NaN	8973	3491	12462
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12467	32.944	NaN	32016	30	0	7322.1	0.106				-1	 	0	73	430.75746439375837	859.5003758543168	2	430.7580261230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8974	3491	12462
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12468	32.945	NaN	9119.6	30	0	1372.3	0.106			+	18650	ISTSRPTSF	9	77	498.2611100090824	994.5076670849649	2	498.2614440917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ISTSRPTSF_	REV__ENST00000456894.5_1_22:39150683-39150851:-|nuORF	65.46538089061403	0.16805504838372562	6				NaN	NaN	0	NaN	8975	3491	12462
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12469	32.947	NaN	35622	30	0	8508.2	0.038	+			33895	RRRGGYGHLAG	11	89	600.3291096464856	1198.643666359771	2	600.3304443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RRRGGYGHLAG_	chr1:155172892-155173248|99|11.8|0.0|20.17|-|1|KRTCAP2,None|1	42.396135135203025	0.5251566046092361	6				NaN	NaN	0	NaN	8976	3491	12462
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12487	32.981	NaN	41993	30	0	5501.1	0.214			+	23752	LCCKAWAF	8	85	499.73340940045404	997.4522658677081	2	499.73419189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_LCC(Carbamidomethyl (C))KAWAF_	REV__ENST00000303296.8_1_11:33375519-33375660:+|nuORF	65.89745868150666	0.44339748671293633	6				NaN	NaN	0	NaN	8991	3494	12486
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12488	32.985	NaN	41787	30	0	5758.8	0.106	+			12620	GEIDGNKVTL	10	93	523.2800744881905	NaN	0	523.2802734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEIDGNKVTL_	ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232319904-232323320:-|nuORF	106.88024417677582	0.010561040971168556	6				NaN	NaN	0	NaN	8992	3494	12486
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12489	32.987	NaN	54856	30	0	4535.2	0.106	+			34821	RYLEQLHQL	9	91	400.55563136645674	1198.6450646995702	3	400.5557861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RYLEQLHQL_	ENSG00000168610|ENST00000264657|STAT3;nc|ENSG00000168610|P40763-2|STAT3;nc|ENSG00000168610|P40763-3|STAT3;STAT3|p.R729Afs*3|2|0.33|ENSG00000168610|chr17:42316861-42316861|G/-|frameshift_variant	74.25504064058377	0.12238981753128622	6				NaN	NaN	0	NaN	8993	3494	12486
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12490	32.989	NaN	17114	30	0	2666.3	0.106	+			38024	SPNAKEFVY	9	97	527.7632969645005	1053.5120409958008	2	527.7640380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SPNAKEFVY_	ENSG00000183864|ENST00000327492|TOB2	78.26377905018397	0.10505600812668463	6				NaN	NaN	0	NaN	8994	3494	12486
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12491	32.991	NaN	27100	30	0	9301.4	0.106	+			50530	YAPSTYAHL	9	83	511.7502615370786	1021.4859701409572	2	511.7508544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YAPSTYAHL_	ENSG00000105699|ENST00000605618|LSR;LSR|p.S424Qfs*10|1|0.5|ENSG00000105699|chr19:35266941-35266942|-/C|frameshift_variant;nc|ENSG00000105699|Q86X29-2|LSR;nc|ENSG00000105699|Q86X29-3|LSR;nc|ENSG00000105699|Q86X29-4|LSR;nc|ENSG00000105699|Q86X29-5|LSR;nc|ENSG00000105699|Q86X29-6|LSR;nc|ENSG00000105699|Q86X29|LSR	71.37791200682192	0.13483053934309522	6				NaN	NaN	0	NaN	8995	3494	12486
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12492	32.993	NaN	38641	30	0	19049	0.106	+			32480	QVMSLGLQK	9	86	502.2830353632555	1002.5515177933111	2	502.2838439941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QVMSLGLQK_	ENST00000314423.11_1_16:69166475-69170710:+|nuORF;ENST00000562237.5_1_16:69166520-69170710:+|nuORF	154.1183686248401	0.005909203230691971	6				NaN	NaN	0	NaN	8996	3494	12486
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12493	32.994	NaN	31038	30	0	9794.3	0.037			+	25129	LLQSTFKRV	9	72	364.55685772881384	1090.6487437866415	3	364.55712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LLQSTFKRV_	REV__ENSG00000116906|ENST00000366647|GNPAT;REV__nc|ENSG00000116906|O15228-2|GNPAT	39.252832667884924	0.4290233611298554	6				NaN	NaN	0	NaN	8997	3494	12486
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12510	33.029	NaN	67284	30	0	11346	0.214	+			40122	STPLAGLAPK	10	104	477.78426257353414	953.5539722138683	2	477.784423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STPLAGLAPK_	BAZ2A|p.K1507Qfs*26|1|0.27|ENSG00000076108|chr12:56600770-56600771|-/G|frameshift_variant;ENSG00000076108|ENST00000549884|BAZ2A;nc|ENSG00000076108|Q9UIF9-2|BAZ2A;nc|ENSG00000076108|Q9UIF9-3|BAZ2A;nc|ENSG00000076108|Q9UIF9|BAZ2A	79.71258880314673	0.19796908725841375	6				NaN	NaN	0	NaN	9011	3497	12509
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12511	33.032	NaN	8503.7	30	0	1079.1	0.106				-1	 	0	74	461.7524908551255	921.490428777051	2	461.75299072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9012	3497	12509
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12512	33.034	NaN	11419	30	0	1543.9	0.106	+			10631	EYNSDLHQF	9	80	576.7503919326871	1151.486230932174	2	576.7509155273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EYNSDLHQF_	BUB1|p.V819Gfs*61|1|0.11|ENSG00000169679|chr2:110642126-110642127|-/C|frameshift_variant;ENSG00000169679|ENST00000302759|BUB1;ENST00000465029.5_1_2:111419157-111435602:-|nuORF;nc|ENSG00000169679|O43683-2|BUB1;nc|ENSG00000169679|O43683-3|BUB1	150.36159442982594	0.006784847064083231	6				NaN	NaN	0	NaN	9013	3497	12509
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12513	33.036	NaN	32007	30	0	2511.1	0.106			+	47239	VMNKFSEMI	9	98	549.7676560765069	1097.5207592198137	2	549.7698974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VMNKFSEMI_	REV__ATP1A3|p.I582Tfs*73|1|0.04|ENSG00000105409|chr19:41978212-41978212|A/-|frameshift_variant;REV__ATP1A4|p.E557Nfs*4|1|0.1|ENSG00000132681|chr1:160171424-160171424|G/-|frameshift_variant;REV__ATP1A4|p.P701Lfs*20|1|0.3|ENSG00000132681|chr1:160174218-160174218|C/-|frameshift_variant;REV__ENSG00000105409|ENST00000648268|ATP1A3;REV__ENSG00000132681|ENST00000368081|ATP1A4;REV__ENSG00000163399|ENST00000295598|ATP1A1;REV__ENST00000463382.1_1_1:116929939-116930896:+|nuORF;REV__nc|ENSG00000105409|P13637-2|ATP1A3;REV__nc|ENSG00000105409|P13637-3|ATP1A3;REV__nc|ENSG00000163399|P05023-2|ATP1A1;REV__nc|ENSG00000163399|P05023-3|ATP1A1;REV__nc|ENSG00000163399|P05023-4|ATP1A1	76.7741389293348	0.11149722112137898	6				NaN	NaN	0	NaN	9014	3497	12509
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12514	33.038	NaN	6876.7	30	0	834.41	0.106	+			17257	HYGKVYLL	8	64	496.78090127167746	NaN	0	496.78173828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HYGKVYLL_	ENSG00000006715|ENST00000310301|VPS41;nc|ENSG00000006715|P49754-2|VPS41;nc|ENSG00000006715|P49754-3|VPS41;VPS41|p.N388Ifs*15|2|0.3|ENSG00000006715|chr7:38771220-38771220|T/-|frameshift_variant	50.0245360154114	1.7418937515398478	6				NaN	NaN	0	NaN	9015	3497	12509
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12515	33.04	NaN	75831	30	0	16357	0.035	+			39507	STFNQVVLK	9	90	518.2951539181109	1034.5757549030218	2	518.2938232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STFNQVVLK_	ENSG00000063177|ENST00000549920|RPL18;ENST00000478088.1_1_16:76269257-76269449:-|nuORF;ENST00000547892.1_1_19:49120227-49120731:-|nuORF;ENST00000552347.5_1_19:49120227-49122400:-|nuORF;ENST00000552705.5_1_19:49119841-49122400:-|nuORF;ENST00000552851.1_1_19:49119841-49122400:-|nuORF;nc|ENSG00000063177|Q07020-2|RPL18	229.3272233562966	7.724902870478276E-13	6				NaN	NaN	0	NaN	9016	3497	12509
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12530	33.069	NaN	1556500	30	0	294120	0.045	+			44281	TSALPIIQK	9	78	485.79973515192245	969.5849173706449	2	485.8000793457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSALPIIQK_	ENSG00000147872|ENST00000276914|PLIN2;ENST00000472715.1_1_9:19126103-19127487:-|nuORF;ENST00000475923.1_1_9:19126103-19126313:-|nuORF;PLIN2|p.V348*|1|0.15|ENSG00000147872|chr9:19116520-19116520|C/-|frameshift_variant	166.67852932204877	0.003333876602083393	6				NaN	NaN	0	NaN	9028	3500	12529
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12531	33.07	NaN	565980	30	0	224460	0.046	+			14999	GTMTGMLYK	9	93	501.242880694634	1000.471208456068	2	501.2431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTMTGMLYK_	ENSG00000178440|ENST00000651763|TIMM23B-AGAP6;ENSG00000204152|ENST00000651259|TIMM23B;ENSG00000265354|ENST00000580018|TIMM23;nc|ENSG00000204152|Q5SRD1-2|TIMM23B	143.8867514904718	0.008656634767784652	6				NaN	NaN	0	NaN	9029	3500	12529
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12532	33.071	NaN	158300	30	0	36553	0.106	+			6291	AVSTFAMVK	9	80	477.25934036772003	952.5041278022401	2	477.2596435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVSTFAMVK_	ENSG00000172893|ENST00000355527|DHCR7;ENST00000534701.1_1_11:71149825-71152361:-|nuORF	124.08010499294276	0.018729767491916592	6				NaN	NaN	0	NaN	9030	3500	12529
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12533	33.072	NaN	4957.8	30	0	1477.9	0.106			+	8377	EALVWHLQ	8	49	332.51470659746656	994.5222903925996	3	332.5152893066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EALVWHLQ_	REV__ENST00000452399.1_1:148932830-148951295:+|nuORF;REV__ENST00000539543.1_1:148932830-148951295:+|nuORF	42.47446043378293	0.6409579893742323	6				NaN	NaN	0	NaN	9031	3500	12529
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12534	33.074	NaN	36161	30	0	15622	0.106	+			43113	TERDLREVF	9	97	388.8716517015073	1163.5931257047218	3	389.2059020996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TERDLREVF_	ENSG00000136527|ENST00000453386|TRA2B;ENSG00000164548|ENST00000297071|TRA2A;ENST00000494255.5_1_7:23547037-23556014:-|nuORF;nc|ENSG00000136527|P62995-3|TRA2B;nc|ENSG00000164548|Q13595-2|TRA2A;nc|ENSG00000164548|Q13595-3|TRA2A;nc|ENSG00000164548|Q13595-4|TRA2A	56.43379154798735	0.2433427591689151	6				NaN	NaN	0	NaN	9032	3500	12529
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12535	33.076	NaN	10923	30	0	2740.4	0.106	+			46983	VKNLNGKSY	9	89	511.7843783056033	1021.5542036780066	2	511.78411865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VKNLNGKSY_	CACYBP|p.M127V|1|0.32|ENSG00000116161|chr1:175007144-175007144|A/G|missense_variant;CACYBP|p.V145Sfs*22|1|0.25|ENSG00000116161|chr1:175007191-175007191|A/-|frameshift_variant;ENSG00000116161|ENST00000367679|CACYBP;ENST00000469173.1_1_1:174976108-174977843:+|nuORF;ENST00000473925.1_1_1:174969094-174977843:+|nuORF;nc|ENSG00000116161|Q9HB71-3|CACYBP	49.44154591367651	0.3095138337212152	6				NaN	NaN	0	NaN	9033	3500	12529
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12536	33.078	NaN	14054	30	0	1034.5	0.106	+			43114	TERDLREVF	9	81	582.8036912555707	1163.5928295779413	2	582.8040161132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TERDLREVF_	ENSG00000136527|ENST00000453386|TRA2B;ENSG00000164548|ENST00000297071|TRA2A;ENST00000494255.5_1_7:23547037-23556014:-|nuORF;nc|ENSG00000136527|P62995-3|TRA2B;nc|ENSG00000164548|Q13595-2|TRA2A;nc|ENSG00000164548|Q13595-3|TRA2A;nc|ENSG00000164548|Q13595-4|TRA2A	83.6470233535746	0.08277643980271215	6				NaN	NaN	0	NaN	9034	3500	12529
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12537	33.08	NaN	21902	30	0	2258.7	0.106	+			8644	EDKTISYQ	8	87	492.23765155825424	982.4607501833085	2	492.2383728027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_EDKTISYQ_	MYO10|p.D302Y|1|0.3|ENSG00000145555|chr5:16779571-16779571|C/A|missense_variant	54.776311868738084	0.5534952410049249	6				NaN	NaN	0	NaN	9035	3500	12529
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12538	33.082	NaN	19644	30	0	12793	0.036				-1	SVIMRIPSK	9	51	349.5384626620312	1045.5935585862935	3	349.53863525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	9	Oxidation (M)	_SVIM(Oxidation (M))RIPSK_	ENSG00000198452|ENST00000641545|OR14L1P;ENST00000419087.1_1_1:247782982-247783861:+|nuORF	39.252832667884924	0.4290233611298554	6				NaN	NaN	0	NaN	9036	3500	12529
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12556	33.117	NaN	15847	30	0	2188.2	0.214	+			12705	GEKQPELQI	9	88	521.2820113186721	1040.549469704144	2	521.2831420898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEKQPELQI_	ENSG00000101347|ENST00000646673|SAMHD1;nc|ENSG00000101347|Q9Y3Z3-3|SAMHD1;nc|ENSG00000101347|Q9Y3Z3-4|SAMHD1	85.86182877749512	0.07653218437724067	6				NaN	NaN	0	NaN	9051	3503	12555
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12557	33.12	NaN	14904	30	0	1279.3	0.106			+	37574	SLNGVVTVVY	10	76	525.7940612911245	1049.573569649049	2	525.7871704101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLNGVVTVVY_	REV__nc|ENSG00000181214|Q6IF36|OR8G2P	90.36981228632155	0.12895663264417576	6				NaN	NaN	0	NaN	9052	3503	12555
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12558	33.122	NaN	11463	30	0	2402.7	0.106			+	10112	ESLTPVATT	9	75	459.74228954034913	NaN	0	459.74212646484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ESLTPVATT_	REV__ENSG00000117983|ENST00000529681|MUC5B;REV__MUC5B|p.E2447Vfs*233|1|0.15|ENSG00000117983|chr11:1244218-1244219|TG/-|frameshift_variant;REV__MUC5B|p.E2929Gfs*98|1|0.13|ENSG00000117983|chr11:1245660-1245661|-/GC|frameshift_variant;REV__MUC5B|p.P2717Qfs*3|2|0.21|ENSG00000117983|chr11:1245025-1245025|C/-|frameshift_variant;REV__MUC5B|p.P3417Qfs*3|1|0.41|ENSG00000117983|chr11:1247125-1247125|C/-|frameshift_variant;REV__MUC5B|p.S2205Qfs*54|1|0.2|ENSG00000117983|chr11:1243486-1243487|-/C|frameshift_variant;REV__MUC5B|p.S3126Pfs*13|1|0.37|ENSG00000117983|chr11:1246251-1246251|C/-|frameshift_variant;REV__MUC5B|p.S3878Pfs*27|1|0.13|ENSG00000117983|chr11:1248507-1248507|C/-|frameshift_variant;REV__MUC5B|p.S4017Lfs*56|1|0.22|ENSG00000117983|chr11:1248928-1248929|-/C|frameshift_variant;REV__MUC5B|p.T4706Pfs*4|2|0.37|ENSG00000117983|chr11:1250996-1250996|A/-|frameshift_variant	42.396135135203025	0.2590952873412954	6				NaN	NaN	0	NaN	9053	3503	12555
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12559	33.124	NaN	10325	30	0	876.3	0.106	+			9053	EGGFGPGPLW	10	91	508.744948352148	NaN	0	508.74725341796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EGGFGPGPLW_	ENST00000371739.3_1_9:139256373-139256460:-|nuORF	40.5726180659479	0.36520375954238715	6				NaN	NaN	0	NaN	9054	3503	12555
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12560	33.126	NaN	5450.9	30	0	507.87	0.032	+			46175	VDVSAPKL	8	56	414.7446825914648	827.4748122497297	2	414.7451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VDVSAPKL_	AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK	90.36981228632155	0.27635063874291205	6				NaN	NaN	0	NaN	9055	3503	12555
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12578	33.161	NaN	87109	30	0	21135	0.214				-1	 	0	73	471.75520474526354	941.4958565573271	2	471.7557373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9070	3506	12577
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12579	33.164	NaN	49444	30	0	3374.4	0.106	+			19916	KEFDGKSLVSV	11	96	604.828949224465	1207.6433455157298	2	604.8306274414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEFDGKSLVSV_	ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;ENST00000517330.1_1_5:77337712-77337985:-|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P;nc|ENSG00000205940|Q58FF8|HSP90AB2P	181.87364410229196	6.9370476059076056E-06	6				NaN	NaN	0	NaN	9071	3506	12577
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12580	33.166	NaN	20273	30	0	10921	0.106	+			46428	VERLQREPG	9	59	361.8691632578844	1082.5856603738532	3	361.86981201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VERLQREPG_	nc|ENSG00000288393|Q92670|ZNF75CP	37.81151784470057	0.4459294069877048	6				NaN	NaN	0	NaN	9072	3506	12577
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12581	33.168	NaN	52879	30	0	7463.5	0.106	+			27181	MDRGAMVLT	9	97	505.2444887982793	1008.4744246633586	2	505.2455139160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_MDRGAM(Oxidation (M))VLT_	ENSG00000100376|ENST00000441876|FAM118A;ENST00000477714.1_1_22:45706022-45724091:+|nuORF;FAM118A|p.R346Tfs*7|1|0.31|ENSG00000100376|chr22:45336385-45336386|-/A|frameshift_variant	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	9073	3506	12577
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12582	33.17	NaN	5209.4	30	0	3273.9	0.106			+	13214	GIFVNKKTI	9	37	340.54599632912846	1018.6161595875853	3	340.5466003417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GIFVNKKTI_	REV__ENSG00000188906|ENST00000298910|LRRK2;REV__LRRK2|p.K1328Rfs*8|1|0.21|ENSG00000188906|chr12:40308485-40308485|A/-|frameshift_variant;REV__LRRK2|p.K906Rfs*8|1|0.29|ENSG00000188906|chr12:40293568-40293568|A/-|frameshift_variant;REV__LRRK2|p.L818Dfs*10|1|0.07|ENSG00000188906|chr12:40284084-40284085|-/GACTGCT|frameshift_variant;REV__LRRK2|p.N2261Kfs*9|1|0.28|ENSG00000188906|chr12:40356119-40356120|-/A|frameshift_variant;REV__LRRK2|p.N710Mfs*2|1|0.49|ENSG00000188906|chr12:40278144-40278144|A/-|frameshift_variant;REV__LRRK2|p.R1639Gfs*15|1|0.59|ENSG00000188906|chr12:40320068-40320068|A/-|frameshift_variant;REV__LRRK2|p.R1639Kfs*13|1|0.36|ENSG00000188906|chr12:40320067-40320068|-/A|frameshift_variant	20.481830146152948	0.6112419832031293	6				NaN	NaN	0	NaN	9074	3506	12577
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12583	33.172	NaN	24804	30	0	4469.3	0.036	+			17729	IENNKAVVY	9	91	525.2855055435695	NaN	0	525.2863159179688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IENNKAVVY_	tr|U7STZ3|U7STZ3_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01040PE=4SV=1	75.04331003522576	0.0883683072398826	6				NaN	NaN	0	NaN	9075	3506	12577
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12584	33.172	NaN	6577.1	30	0	1122.5	0.142	+			40848	SVETPQDVLR	10	81	572.3033325400023	1142.5921121468045	2	572.3045654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVETPQDVLR_	ENSG00000143167|ENST00000367868|GPA33	59.93077597824379	0.36646980200755325	6				NaN	NaN	0	NaN	9076	3506	12577
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12602	33.208	NaN	29326	30	0	4256	0.214	+			46465	VETAKVYQL	9	84	525.7940612911245	1049.573569649049	2	525.7951049804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VETAKVYQL_	ENSG00000137815|ENST00000389629|RTF1;RTF1|p.D528Ifs*12|1|0.29|ENSG00000137815|chr15:41477182-41477182|G/-|frameshift_variant	124.08010499294276	0.018729767491916592	6				NaN	NaN	0	NaN	9091	3509	12601
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12603	33.212	NaN	25824	30	0	2794.7	0.106	+			28059	NAARDFVNY	9	91	535.2560052797493	1068.4974576262985	2	535.2568969726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NAARDFVNY_	DHX9|p.L1065Cfs*20|1|0.41|ENSG00000135829|chr1:182883563-182883563|C/-|frameshift_variant;DHX9|p.L657Ffs*44|1|0.34|ENSG00000135829|chr1:182876197-182876198|-/T|frameshift_variant;DHX9|p.Q155Lfs*8|1|0.08|ENSG00000135829|chr1:182853404-182853405|-/TG|frameshift_variant;ENSG00000135829|ENST00000367549|DHX9	117.5257442709337	0.022697614825424036	6				NaN	NaN	0	NaN	9092	3509	12601
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12604	33.214	NaN	13598	30	0	1864.6	0.106	+			25826	LSDLKTIIS	9	83	495.2971221983494	988.5796914634989	2	495.2975769042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSDLKTIIS_	tr|U7SUW6|U7SUW6_FUSNUPrecorrin-6yC5,15-methyltransferase(Decarboxylating),CbiEsubunitOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01032PE=4SV=1	58.78195531508484	0.22376836668196862	6				NaN	NaN	0	NaN	9093	3509	12601
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12605	33.216	NaN	9720.7	30	0	1620	0.106	+			8292	EAIKILKGEY	10	81	582.3366432317113	1162.6587335302224	2	582.3373413085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EAIKILKGEY_	ENSG00000079785|ENST00000233084|DDX1;ENST00000470674.1_1_2:15763561-15768670:+|nuORF;nc|ENSG00000079785|Q92499-2|DDX1;nc|ENSG00000079785|Q92499-3|DDX1	104.06999374311218	0.06561005972557103	6				NaN	NaN	0	NaN	9094	3509	12601
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12606	33.217	NaN	8827.9	30	0	702.24	0.106				-1	 	0	71	382.56037813333603	1144.6593050002082	3	382.55810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9095	3509	12601
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12607	33.219	NaN	4784.5	30	0	719.71	0.033			+	-1	IHPSAMGL	8	56	421.21494165460285	840.4153303760057	2	421.2153625488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_IHPSAM(Oxidation (M))GL_	REV__ENSG00000148120|ENST00000375315|AOPEP;REV__nc|ENSG00000148120|Q8N6M6-3|AOPEP	29.841539824830324	0.7289191502596711	6				NaN	NaN	0	NaN	9096	3509	12601
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12608	33.22	NaN	6941.5	30	0	863.08	0.141	+			19096	IYKAPSENW	9	81	554.2756815761796	1106.5368102191592	2	554.2765502929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IYKAPSENW_	ENSG00000130816|ENST00000359526|DNMT1;nc|ENSG00000130816|P26358-3|DNMT1;nc|ENSG00000130816|P26358|DNMT1	69.6276240434122	0.14239879520340665	6				NaN	NaN	0	NaN	9097	3509	12601
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12626	33.259	NaN	36697	30	0	4442.6	0.215				-1	 	0	93	521.336322792445	1040.65809265169	2	521.3372192382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9112	3512	12625
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12627	33.263	NaN	35354	30	0	19492	0.106	+			7154	DAFGYATLK	9	79	493.2524403039586	984.4903276747173	2	493.2528076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DAFGYATLK_	ENSG00000164327|ENST00000357387|RICTOR;nc|ENSG00000164327|Q6R327-3|RICTOR;RICTOR|p.S1495Pfs*13|1|0.05|ENSG00000164327|chr5:38945642-38945643|-/ATTCTGGG|frameshift_variant	54.776311868738084	0.25715957988447635	6				NaN	NaN	0	NaN	9113	3512	12625
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12628	33.265	NaN	24181	30	0	7494.8	0.106				-1	LLNFSDSRTM	10	97	400.5291133064359	1198.5655105195076	3	400.5292663574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_LLNFSDSRTM(Oxidation (M))_	CON__Q3SZ57	46.45678178249821	0.4896490706773647	6				NaN	NaN	0	NaN	9114	3512	12625
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12629	33.267	NaN	7424.4	30	0	934.65	0.106	+			47872	VSLGLAVSK	9	67	437.2731374689399	872.5317220046799	2	437.2735290527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSLGLAVSK_	ENSG00000018869|ENST00000586929|ZNF582;ENSG00000197302|ENST00000316491|KRBOX5;ENSG00000197566|ENST00000311331|ZNF624;ENST00000529943.6_1_16:31724760-31765604:+|nuORF;ENST00000534277.5_1_16:31724760-31767037:+|nuORF;ENST00000579983.1_1_17:16534952-16537956:-|nuORF;ZNF624|p.I325Nfs*9|1|0.21|ENSG00000197566|chr17:16623912-16623913|-/T|frameshift_variant;ZNF624|p.I325Sfs*167|1|0.46|ENSG00000197566|chr17:16623913-16623913|T/-|frameshift_variant;ZNF624|p.K498Nfs*74|1|0.49|ENSG00000197566|chr17:16623392-16623392|T/-|frameshift_variant;ZNF624|p.K666Nfs*130|1|0.46|ENSG00000197566|chr17:16622888-16622888|T/-|frameshift_variant;ZNF624|p.K787Ifs*14|1|0.11|ENSG00000197566|chr17:16622526-16622527|-/ATAAATGTAATGAA|frameshift_variant	61.691277971877994	0.19951612995419254	6				NaN	NaN	0	NaN	9115	3512	12625
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12630	33.269	NaN	24451	30	0	1946.8	0.106	+			41463	SVNNSIFYR	9	98	550.2799784672033	1098.5454040012064	2	550.2796630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVNNSIFYR_	DHX16|p.I1033*|5|0.32|ENSG00000204560|chr6:30653271-30653271|T/-|frameshift_variant;DHX16|p.R868Lfs*15|1|0.04|ENSG00000204560|chr6:30655493-30655493|C/-|frameshift_variant;ENSG00000204560|ENST00000376442|DHX16	96.0336014099291	0.047854655524928534	6				NaN	NaN	0	NaN	9116	3512	12625
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12631	33.27	NaN	6025.3	30	0	763.36	0.033	+			36112	SEKLVSVM	8	63	446.7432522001017	891.4719514670035	2	446.7438659667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SEKLVSVM_	ENSG00000136811|ENST00000351030|ODF2;nc|ENSG00000136811|Q5BJF6-10|ODF2;nc|ENSG00000136811|Q5BJF6-2|ODF2;nc|ENSG00000136811|Q5BJF6-3|ODF2;nc|ENSG00000136811|Q5BJF6-4|ODF2;nc|ENSG00000136811|Q5BJF6-5|ODF2;nc|ENSG00000136811|Q5BJF6-6|ODF2;nc|ENSG00000136811|Q5BJF6-7|ODF2;nc|ENSG00000136811|Q5BJF6-8|ODF2;nc|ENSG00000136811|Q5BJF6|ODF2	58.78195531508484	0.5138399468736706	6				NaN	NaN	0	NaN	9117	3512	12625
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12632	33.271	NaN	5048.6	30	0	757.68	0.139				-1	 	0	70	453.7551467097731	905.4957404863462	2	453.7548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9118	3512	12625
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12650	33.31	NaN	62585	30	0	9647.7	0.205	+			8505	EATGQFHVY	9	94	526.2451839379114	1050.4758149426227	2	526.24609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EATGQFHVY_	CEACAM6|p.I217Mfs*11|3|0.07|ENSG00000086548|chr19:41761474-41761475|-/G|frameshift_variant;chr19:41756959-41758061|166|203.57|0.0|24.28|+|2|CEACAM6,None|1;ENSG00000079385|ENST00000161559|CEACAM1;ENSG00000086548|ENST00000199764|CEACAM6;ENSG00000170956|ENST00000357396|CEACAM3;ENST00000344391.9_1_19:43023158-43032553:-|nuORF;ENST00000377806.7_1_19:43023094-43032607:-|nuORF;ENST00000403136.1_1_19:43025413-43032607:-|nuORF;nc|ENSG00000079385|P13688-10|CEACAM1;nc|ENSG00000079385|P13688-11|CEACAM1;nc|ENSG00000079385|P13688-2|CEACAM1;nc|ENSG00000079385|P13688-3|CEACAM1;nc|ENSG00000079385|P13688-4|CEACAM1;nc|ENSG00000079385|P13688-5|CEACAM1;nc|ENSG00000079385|P13688-6|CEACAM1;nc|ENSG00000079385|P13688-7|CEACAM1;nc|ENSG00000079385|P13688-8|CEACAM1;nc|ENSG00000079385|P13688-9|CEACAM1;nc|ENSG00000170956|P40198-2|CEACAM3;nc|ENSG00000170956|P40198-3|CEACAM3	180.92599232761785	0.0012030822705978085	6				NaN	NaN	0	NaN	9133	3515	12649
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12651	33.314	NaN	22345	30	0	3335.4	0.106	+			17376	IALVHTDSY	9	91	509.7631231342335	1017.5116933352671	2	509.7637634277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IALVHTDSY_	ENSG00000198961|ENST00000361189|PJA2;nc|ENSG00000198961|O43164-2|PJA2;PJA2|p.D450Rfs*6|1|0.16|ENSG00000198961|chr5:109368682-109368683|-/T|frameshift_variant	186.08907774512184	0.000684772772607045	6				NaN	NaN	0	NaN	9134	3515	12649
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12652	33.316	NaN	21717	30	0	3227.9	0.106				-1	 	0	76	438.2523541316023	874.4901553300047	2	438.2525329589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9135	3515	12649
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12653	33.318	NaN	10165	30	0	1029.4	0.106	+			37283	SLAMKILW	8	77	481.2808391804732	960.5471254277464	2	481.2812805175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLAMKILW_	ENST00000307116.6_1_10:74790078-74804739:-|nuORF	45.9519527083369	0.6193794311207887	6				NaN	NaN	0	NaN	9136	3515	12649
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12654	33.319	NaN	4910.2	30	0	2092.5	0.106			+	17449	IAYWLQQAK	9	58	374.20934253156975	1119.6061981949092	3	374.20977783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IAYWLQQAK_	REV__ENSG00000167325|ENST00000300738|RRM1	35.200714571348534	0.47427825964483533	6				NaN	NaN	0	NaN	9137	3515	12649
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12655	33.321	NaN	27925	30	0	6899.5	0.106				-1	 	0	79	539.2997266533118	1076.5849003734236	2	539.3004760742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9138	3515	12649
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12656	33.323	NaN	6335.6	30	0	1044.9	0.034			+	36710	SGSSPLPRF	9	71	474.2504494852334	946.4863460372668	2	474.25054931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SGSSPLPRF_	REV__ENST00000453096.6_1_11:18344163-18344274:+|nuORF	27.882242232435846	0.5426732730940306	6				NaN	NaN	0	NaN	9139	3515	12649
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12673	33.358	NaN	17649	30	0	2904.4	0.215				-1	 	0	72	522.7998361424756	1043.585119351751	2	522.8004150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9153	3518	12672
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12674	33.362	NaN	14584	30	0	1708.5	0.106	+			36802	SIDMGPQLK	9	79	494.7621055654866	987.5096581977732	2	494.7645568847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SIDMGPQLK_	ENSG00000142949|ENST00000359947|PTPRF;nc|ENSG00000142949|P10586-2|PTPRF	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	9154	3518	12672
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12675	33.364	NaN	13002	30	0	790.85	0.106	+			48760	VTVRPGLAM	9	73	472.2728517824467	942.5311506316934	2	472.2731628417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTVRPGLAM_	ENSG00000099974|ENST00000215770|DDTL;ENSG00000099977|ENST00000398344|DDT;ENST00000444947.2_1_22:24315904-24316657:-|nuORF;nc|ENSG00000099977|P30046-2|DDT	54.776311868738084	0.25715957988447635	6				NaN	NaN	0	NaN	9155	3518	12672
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12676	33.366	NaN	6027.4	30	0	1097.2	0.106	+			26550	LTSGIFETK	9	75	498.27334575856065	994.5321385839213	2	498.273681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LTSGIFETK_	ENSG00000087460|ENST00000371085|GNAS;ENST00000313949.11_1_20:57415898-57485881:+|nuORF;ENST00000371075.7_3_20:57415898-57485881:+|nuORF;ENST00000476196.5_1_20:57478538-57485881:+|nuORF;ENST00000477931.5_1_20:57464155-57485881:+|nuORF;ENST00000480975.5_1_20:57464272-57485881:+|nuORF;ENST00000487981.5_1_20:57478601-57484479:+|nuORF;ENST00000496934.5_1_20:57473969-57485881:+|nuORF;GNAS|p.R201C|2|0.33|ENSG00000087460|chr20:58909365-58909365|C/T|missense_variant;nc|ENSG00000087460|P63092-2|GNAS;nc|ENSG00000087460|P63092-3|GNAS;nc|ENSG00000087460|P63092-4|GNAS;nc|ENSG00000087460|Q5JWF2-2|GNAS;nc|ENSG00000087460|Q5JWF2|GNAS	96.0336014099291	0.047854655524928534	6				NaN	NaN	0	NaN	9156	3518	12672
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12677	33.368	NaN	8521.1	30	0	1608.5	0.106	+			47360	VPESSLAGHSF	11	76	565.7769524486228	1129.5393519640454	2	565.77783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VPESSLAGHSF_	ENSG00000184900|ENST00000332859|SUMO3;ENST00000397898.7_1_21:46226868-46228953:-|nuORF;nc|ENSG00000184900|P55854-2|SUMO3	117.81106730687013	0.024388665464245545	6				NaN	NaN	0	NaN	9157	3518	12672
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12678	33.369	NaN	10405	30	0	781.44	0.036	+			8725	EEELLPGVDV	10	90	550.2799784672033	1098.5454040012064	2	550.7833862304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EEELLPGVDV_	ENSG00000107874|ENST00000369937|CUEDC2	39.252832667884924	0.5560298534376815	6				NaN	NaN	0	NaN	9158	3518	12672
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12679	33.37	NaN	7274	30	0	2279.8	0.14				-1	 	0	61	467.7708738957599	933.5271948583198	2	467.7710266113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9159	3518	12672
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12697	33.408	NaN	70261	30	0	13814	0.214	+			39500	STFNNDILSK	10	94	569.7901085170344	1137.5656641008686	2	569.7908935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STFNNDILSK_	ENSG00000111912|ENST00000392477|NCOA7;nc|ENSG00000111912|Q8NI08-2|NCOA7;nc|ENSG00000111912|Q8NI08-5|NCOA7;nc|ENSG00000111912|Q8NI08-7|NCOA7	188.9123650225555	0.0003434289860817577	6				NaN	NaN	0	NaN	9174	3521	12696
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12698	33.412	NaN	32935	30	0	9428.1	0.106	+			38501	SSATTSPFFK	10	88	536.7685797108925	1071.5226064885849	2	536.769287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSATTSPFFK_	ENSG00000133961|ENST00000555238|NUMB;nc|ENSG00000133961|P49757-2|NUMB;nc|ENSG00000133961|P49757-3|NUMB;nc|ENSG00000133961|P49757-4|NUMB;nc|ENSG00000133961|P49757-5|NUMB;nc|ENSG00000133961|P49757-6|NUMB;nc|ENSG00000133961|P49757-7|NUMB;nc|ENSG00000133961|P49757-8|NUMB;nc|ENSG00000133961|P49757-9|NUMB	150.36159442982594	0.008431331982545942	6				NaN	NaN	0	NaN	9175	3521	12696
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12699	33.414	NaN	23785	30	0	5664.6	0.106				-1	 	0	74	423.25765467339437	844.5007564135888	2	423.258056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9176	3521	12696
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12700	33.416	NaN	39156	30	0	11099	0.106	+			15312	GTVDVTPFIKK	11	67	402.23581330144475	1203.6856105045342	3	402.23590087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTVDVTPFIKK_	ENSG00000198408|ENST00000361464|OGA;nc|ENSG00000198408|O60502-2|OGA;nc|ENSG00000198408|O60502-4|OGA	70.39856735676683	0.2324169829117963	6				NaN	NaN	0	NaN	9177	3521	12696
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12701	33.418	NaN	28880	30	0	6548.9	0.106	+			11053	FENKFAVET	9	83	542.7685772353051	1083.52260153741	2	542.7695922851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FENKFAVET_	ARHGEF7-ITM2B|1|fusion;ARHGEF7-ITM2B|2|fusion;ARHGEF7-ITM2B|3|fusion;ARHGEF7-ITM2B|4|fusion;ENSG00000136156|ENST00000647800|ITM2B;nc|ENSG00000136156|Q9Y287-2|ITM2B	106.88024417677582	0.032181361622142884	6				NaN	NaN	0	NaN	9178	3521	12696
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12702	33.419	NaN	34881	30	0	6957.4	0.035	+			28964	NSFLKKEGL	9	89	518.2951539181109	1034.5757549030218	2	518.2952270507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NSFLKKEGL_	ENSG00000172728|ENST00000327671|FUT10;ENST00000416169.5_1_8:33310680-33318970:-|nuORF;ENST00000518076.1_1_8:33247301-33311025:-|nuORF;ENST00000520767.5_1_8:33246435-33318970:-|nuORF;nc|ENSG00000172728|Q6P4F1-2|FUT10;nc|ENSG00000172728|Q6P4F1-4|FUT10;nc|ENSG00000172728|Q6P4F1-5|FUT10;nc|ENSG00000172728|Q6P4F1-6|FUT10;nc|ENSG00000172728|Q6P4F1-7|FUT10	37.81151784470057	0.4459294069877048	6				NaN	NaN	0	NaN	9179	3521	12696
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12703	33.42	NaN	10521	30	0	2286.5	0.143	+			34759	RYFDPANGKF	10	75	607.8006030004047	1213.5866530676094	2	607.8015747070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RYFDPANGKF_	ENSG00000167658|ENST00000309311|EEF2;ENST00000598182.5_1_19:3980752-3982305:-|nuORF	94.4091291819064	0.10583072883246657	6				NaN	NaN	0	NaN	9180	3521	12696
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12721	33.46	NaN	52974	30	0	5996.7	0.215	+			10730	FADQEVRSL	9	90	532.7720048915646	1063.5294568499291	2	532.7725830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FADQEVRSL_	ENSG00000011405|ENST00000691414|PIK3C2A	148.6902309647307	0.00717441509122429	6				NaN	NaN	0	NaN	9195	3524	12720
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12722	33.463	NaN	22042	30	0	2522.1	0.106	+			44282	TSALPIIQK	9	85	485.79973515192245	969.5849173706449	2	485.79962158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TSALPIIQK_	ENSG00000147872|ENST00000276914|PLIN2;ENST00000472715.1_1_9:19126103-19127487:-|nuORF;ENST00000475923.1_1_9:19126103-19126313:-|nuORF;PLIN2|p.V348*|1|0.15|ENSG00000147872|chr9:19116520-19116520|C/-|frameshift_variant	79.71258880314673	0.09879134589249085	6				NaN	NaN	0	NaN	9196	3524	12720
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12723	33.465	NaN	28109	30	0	11631	0.106	+			31872	QPWNHGETF	9	79	558.2481460708872	1114.4817392085743	2	558.2493896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QPWNHGETF_	nc|ENSG00000211890|P01877-1|IGHA2;nc|ENSG00000211890|P01877|IGHA2	104.0567914643314	0.03506238181059741	6				NaN	NaN	0	NaN	9197	3524	12720
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12724	33.467	NaN	13566	30	0	4611.2	0.106				-1	 	0	59	442.28373741914913	882.5529219050983	2	442.2841491699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9198	3524	12720
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12725	33.469	NaN	19051	30	0	5887.1	0.106				-1	PSKDYLLRHCK	11	82	472.9206733556458	1415.7401906671375	3	472.92083740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_PSKDYLLRHC(Carbamidomethyl (C))K_	ENSG00000128585|ENST00000352689|MKLN1;ENST00000494785.5_1_7:131012658-131163543:+|nuORF;ENST00000497746.1_1_7:131149041-131155790:+|nuORF;ENST00000498778.5_1_7:131151082-131172419:+|nuORF;nc|ENSG00000128585|Q9UL63-2|MKLN1	25.891714612410027	0.7182082266701849	6				NaN	NaN	0	NaN	9199	3524	12720
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12726	33.471	NaN	14570	30	0	2850.3	0.034				-1	 	0	75	459.2863532173735	916.558153501547	2	459.286865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9200	3524	12720
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12727	33.471	NaN	6556.1	30	0	985.86	0.143	+			47134	VLPPQPTLPPQ	11	69	396.2323817674202	1185.6753159024606	3	396.23248291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VLPPQPTLPPQ_	ENSG00000165238|ENST00000427277|WNK2;nc|ENSG00000165238|Q9Y3S1-2|WNK2;nc|ENSG00000165238|Q9Y3S1-4|WNK2;nc|ENSG00000165238|Q9Y3S1|WNK2;WNK2|p.S1424Pfs*5|1|0.34|ENSG00000165238|chr9:93288908-93288908|C/-|frameshift_variant;WNK2|p.T1980Lfs*12|2|0.16|ENSG00000165238|chr9:93297965-93297965|C/-|frameshift_variant	50.79123845855914	0.4102859592092987	6				NaN	NaN	0	NaN	9201	3524	12720
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12745	33.51	NaN	34129	30	0	6036.9	0.214	+			16002	HAPHFQVSL	9	102	518.2730736333211	NaN	0	518.2723388671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HAPHFQVSL_	ENSG00000176945|ENST00000447234|MUC20;nc|ENSG00000176945|Q8N307-3|MUC20	77.31757898189308	0.08057531075035683	6				NaN	NaN	0	NaN	9216	3527	12744
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12746	33.514	NaN	27833	30	0	8176.8	0.106	+			37363	SLFGSPVAK	9	79	453.25722320202397	904.499893470848	2	453.2580261230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLFGSPVAK_	ENSG00000186260|ENST00000571589|MRTFB;nc|ENSG00000186260|Q9ULH7-4|MRTFB;nc|ENSG00000186260|Q9ULH7|MRTFB	85.16082228582465	0.07850854922700509	6				NaN	NaN	0	NaN	9217	3527	12744
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12747	33.516	NaN	25965	30	0	7068.3	0.106	+			29481	PCRWVNIL	8	84	500.77417124901075	999.5337895648215	2	500.774658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PCRWVNIL_	ENST00000372939.5_1_X:100297267-100306641:-|nuORF	47.91560031466742	0.6071945918984287	6				NaN	NaN	0	NaN	9218	3527	12744
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12748	33.518	NaN	9333.8	30	0	1670.1	0.106				-1	 	0	73	450.2341929405402	898.4538329478804	2	450.23455810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9219	3527	12744
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12749	33.52	NaN	10268	30	0	1974.5	0.106	+			29032	NSTFNQVVLK	10	82	575.3160864369942	1148.6176199407882	2	575.3171997070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NSTFNQVVLK_	ENSG00000063177|ENST00000549920|RPL18;ENST00000547892.1_1_19:49120227-49120731:-|nuORF;ENST00000552347.5_1_19:49120227-49122400:-|nuORF;ENST00000552705.5_1_19:49119841-49122400:-|nuORF;ENST00000552851.1_1_19:49119841-49122400:-|nuORF;nc|ENSG00000063177|Q07020-2|RPL18	78.26377905018397	0.20980573808910843	6				NaN	NaN	0	NaN	9220	3527	12744
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12750	33.521	NaN	8867.9	30	0	1108.5	0.106				-1	YPDEKSVCL	9	80	555.759444747567	1109.504336561934	2	555.7607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_YPDEKSVC(Carbamidomethyl (C))L_	ENSG00000125170|ENST00000340099|DOK4	60.11826168202944	0.21262886028301267	6				NaN	NaN	0	NaN	9221	3527	12744
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12751	33.523	NaN	3697.1	30	0	341.45	0.035	+			45140	TVLENSTSY	9	68	507.2422789274717	1012.4700049217435	2	507.2428283691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TVLENSTSY_	ASAH1|p.W314Cfs*28|1|0.11|ENSG00000104763|chr8:18059440-18059440|C/-|frameshift_variant;ENSG00000104763|ENST00000637790|ASAH1;nc|ENSG00000104763|Q13510-2|ASAH1;nc|ENSG00000104763|Q13510-3|ASAH1	90.14881205920913	0.06444578693273594	6				NaN	NaN	0	NaN	9222	3527	12744
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12769	33.56	NaN	153020	30	0	16596	0.198	+			8125	DYMKTTSNF	9	115	553.7448741858564	NaN	0	553.7447509765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DYMKTTSNF_	ENSG00000165525|ENST00000298310|NEMF;nc|ENSG00000165525|O60524-3|NEMF;nc|ENSG00000165525|O60524-4|NEMF;NEMF|p.K641Rfs*9|1|0.15|ENSG00000165525|chr14:49802721-49802721|T/-|frameshift_variant;NEMF|p.M879*|1|0.12|ENSG00000165525|chr14:49789558-49789558|T/-|frameshift_variant;NEMF|p.M879Nfs*10|1|0.13|ENSG00000165525|chr14:49789557-49789558|-/T|frameshift_variant	177.3047273071476	0.005321040389749554	6				NaN	NaN	0	NaN	9237	3530	12768
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12770	33.563	NaN	33856	30	0	9132.6	0.106				-1	 	0	93	519.7762339105514	1037.5379148879026	2	519.7770385742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9238	3530	12768
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12771	33.565	NaN	63798	30	0	6719.9	0.106				-1	 	0	104	466.7554934927239	931.4964340522478	2	466.7557067871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9239	3530	12768
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12772	33.567	NaN	29168	30	0	13537	0.106	+			31863	QPVKVLGENY	10	89	573.8106586682835	1145.606764403367	2	573.8114624023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QPVKVLGENY_	ENSG00000108883|ENST00000426333|EFTUD2;ENST00000586276.5_1_17:42937766-42940268:-|nuORF;ENST00000590367.5_1_17:42931463-42950195:-|nuORF;nc|ENSG00000108883|Q15029-2|EFTUD2;nc|ENSG00000108883|Q15029-3|EFTUD2	42.86426827375447	0.522752283233888	6				NaN	NaN	0	NaN	9240	3530	12768
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12773	33.569	NaN	40273	30	0	4738.5	0.106				-1	 	0	81	478.77909796197275	955.5436429907455	2	478.7794189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9241	3530	12768
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12774	33.571	NaN	6597	30	0	1302.3	0.106	+			25490	LPSELERSY	9	76	547.2791855175293	1092.5438181018585	2	547.2802124023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LPSELERSY_	ENSG00000055130|ENST00000325222|CUL1	78.26377905018397	0.10505600812668463	6				NaN	NaN	0	NaN	9242	3530	12768
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12775	33.572	NaN	12676	30	0	1816.7	0.035	+			35257	SALIEENPE	9	86	501.242880694634	1000.471208456068	2	501.2432556152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SALIEENPE_	CARF|p.T694A|1|0.18|ENSG00000138380|chr2:202983526-202983526|A/G|missense_variant;ENSG00000138380|ENST00000438828|CARF;nc|ENSG00000138380|Q8N187-3|CARF	52.936696900407355	0.27249468807391813	6				NaN	NaN	0	NaN	9243	3530	12768
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12793	33.61	NaN	28883	30	0	6214.3	0.214	+			46414	VEPVKTYAL	9	94	510.29136273825276	1018.5681725433055	2	510.2925720214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VEPVKTYAL_	ENSG00000156958|ENST00000560031|GALK2;ENST00000559040.1_1_15:49448112-49518881:+|nuORF;nc|ENSG00000156958|Q01415-2|GALK2	51.19269402634007	0.2889735674168909	6				NaN	NaN	0	NaN	9258	3533	12792
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12794	33.614	NaN	22504	30	0	5025.7	0.106			+	18703	ITEEETLLK	9	75	359.2008176343259	1074.5806235031778	3	359.2013244628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ITEEETLLK_	REV__ENSG00000198932|ENST00000537097|GPRASP1;REV__GPRASP1|p.I1166Ffs*16|1|0.29|ENSG00000198932|chrX:102657404-102657404|A/-|frameshift_variant;REV__GPRASP1|p.L1217Ffs*23|1|0.19|ENSG00000198932|chrX:102657557-102657558|-/T|frameshift_variant	45.9519527083369	0.35044536499095585	6				NaN	NaN	0	NaN	9259	3533	12792
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12795	33.616	NaN	23908	30	0	9653	0.106	+			47159	VLSGPGPLELQ	11	94	370.54470704171854	1108.6122917253556	3	370.5452575683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VLSGPGPLELQ_	ENST00000216124.9_1_22:51065986-51066424:-|nuORF;ENST00000395621.7_1_22:51065986-51066424:-|nuORF	32.81241826257853	0.645615689454792	6				NaN	NaN	0	NaN	9260	3533	12792
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12796	33.617	NaN	7744.5	30	0	749.14	0.106	+			50495	YALQVHCY	8	78	527.244362688944	1052.4741724446878	2	527.2452392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_YALQVHC(Carbamidomethyl (C))Y_	ENSG00000110321|ENST00000339995|EIF4G2;ENST00000525606.5_1_11:10819365-10820979:-|nuORF;ENST00000534470.1_1_11:10820460-10820850:-|nuORF;nc|ENSG00000110321|P78344-2|EIF4G2	119.22118168366049	0.23566888071072137	6				NaN	NaN	0	NaN	9261	3533	12792
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12797	33.619	NaN	9957.6	30	0	1516	0.106			+	-1	SLMGLMAVFI	10	57	366.5290211786465	1096.5652341361395	3	366.52935791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_SLMGLM(Oxidation (M))AVFI_	REV__ENSG00000101337|ENST00000398022|TM9SF4;REV__TM9SF4|p.F425Lfs*7|1|0.44|ENSG00000101337|chr20:32155128-32155128|T/-|frameshift_variant	36.446750945000026	0.5818864909973037	6				NaN	NaN	0	NaN	9262	3533	12792
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12798	33.621	NaN	4455.6	30	0	515.48	0.034			+	-1	VSCVYIVA	8	68	455.7380734868718	909.4615940405437	2	455.7386169433594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_VSC(Carbamidomethyl (C))VYIVA_	REV__ENSG00000197444|ENST00000374103|OGDHL;REV__nc|ENSG00000197444|Q9ULD0-2|OGDHL;REV__nc|ENSG00000197444|Q9ULD0-3|OGDHL	62.97842346883844	0.4722955155785405	6				NaN	NaN	0	NaN	9263	3533	12792
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12799	33.622	NaN	6991.2	30	0	1139.6	0.139			+	25955	LSIGLLGIGP	10	68	470.29662428228977	938.5786956313796	2	470.29718017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSIGLLGIGP_	REV__ENSG00000177465|ENST00000326303|ACOT4	51.33545320467046	0.4446945571623749	6				NaN	NaN	0	NaN	9264	3533	12792
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12817	33.661	NaN	25305	30	0	2443	0.214			+	19843	KEEETEIPL	9	93	544.279527336673	1086.544501740146	2	544.2805786132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEEETEIPL_	REV__ENST00000266085.6_1_22:33257141-33257363:+|nuORF	101.45984612302182	0.0377122763612125	6				NaN	NaN	0	NaN	9279	3536	12816
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12818	33.664	NaN	18983	30	0	5543.2	0.106	+			13203	GIATTFINK	9	91	482.7763704983439	963.5381880634878	2	482.77667236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GIATTFINK_	ENSG00000183258|ENST00000330503|DDX41;ENST00000503078.5_1_5:176938794-176943460:-|nuORF;ENST00000505081.5_1_5:176938794-176940626:-|nuORF;ENST00000507900.5_1_5:176938794-176942272:-|nuORF	107.00750918261382	0.032051501805654005	6				NaN	NaN	0	NaN	9280	3536	12816
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12819	33.666	NaN	20219	30	0	2503.9	0.106			+	47182	VLVGAFLFVC	10	84	534.3044035689861	NaN	0	534.3043212890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VLVGAFLFVC_	REV__ENST00000552092.1_1_12:117299165-117317026:-|nuORF	54.76467175910256	0.2754795324328683	6				NaN	NaN	0	NaN	9281	3536	12816
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12820	33.668	NaN	17470	30	0	3502.9	0.106	+			43609	TIMPKDIQLAR	11	76	643.3690369539421	1284.723520974684	2	643.3687744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TIMPKDIQLAR_	ENSG00000132475|ENST00000254810|H3-3B;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000168148|ENST00000366696|H3-4;ENSG00000183598|ENST00000331491|H3C13;ENSG00000188375|ENST00000340398|H3-5;ENSG00000197153|ENST00000359303|H3C12;ENSG00000197409|ENST00000356476|H3C4;ENSG00000203811|ENST00000369158|H3C14;ENSG00000203852|ENST00000403683|H3C15;ENSG00000273983|ENST00000614378|H3C8;ENSG00000274750|ENST00000614911|H3C6;ENSG00000275379|ENST00000616365|H3C11;ENSG00000275714|ENST00000613854|H3C1;ENSG00000277775|ENST00000618052|H3C7;ENSG00000278828|ENST00000685041|H3C10;ENST00000404612.1_1_6:26322106-26322214:-|nuORF;ENST00000593254.1_1_17:73774678-73775846:-|nuORF	120.27252224102466	0.019657071325519273	6				NaN	NaN	0	NaN	9282	3536	12816
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12821	33.67	NaN	20347	30	0	9885	0.106	+			26547	LTSFDIHILRA	11	70	429.2474369668551	1284.7204815007653	3	429.2478942871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LTSFDIHILRA_	ENSG00000154545|ENST00000471932|MAGED4;ENSG00000187243|ENST00000335504|MAGED4B;ENST00000470594.5_1_X:51809762-51812242:-|nuORF;nc|ENSG00000187243|Q96JG8-2|MAGED4;nc|ENSG00000187243|Q96JG8-3|MAGED4;nc|ENSG00000187243|Q96JG8-4|MAGED4	31.529811441608018	0.6590691889962369	6				NaN	NaN	0	NaN	9283	3536	12816
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12822	33.672	NaN	6946.4	30	0	885.79	0.034			+	29035	NSVAPLDSI	9	66	458.24258893651046	914.4706249398209	2	458.2428283691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NSVAPLDSI_	REV__ENSG00000105341|ENST00000221943|DMAC2;REV__ENST00000589503.1_1_19:41938138-41938741:-|nuORF;REV__nc|ENSG00000105341|Q9NW81-4|DMAC2;REV__nc|ENSG00000105341|Q9NW81-5|DMAC2	51.33545320467046	0.2872990594074956	6				NaN	NaN	0	NaN	9284	3536	12816
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12823	33.672	NaN	18138	30	0	2927.6	0.14	+			17022	HPTVVISAY	9	75	493.76806619185834	985.5215794505167	2	493.7686767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HPTVVISAY_	CCT3|p.A379Lfs*9|1|0.21|ENSG00000163468|chr1:156312061-156312061|C/-|frameshift_variant;CCT3|p.K197Nfs*23|1|0.17|ENSG00000163468|chr1:156320857-156320857|T/-|frameshift_variant;CCT3|p.L350Ffs*9|1|0.49|ENSG00000163468|chr1:156312146-156312147|-/A|frameshift_variant;ENSG00000163468|ENST00000295688|CCT3;nc|ENSG00000163468|P49368-2|CCT3	73.97473282117947	0.12360187025703594	6				NaN	NaN	0	NaN	9285	3536	12816
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12841	33.709	NaN	1111800	30	0	164110	0.119	+			29177	NVIRDAVTY	9	106	525.7817754640431	1049.5489979948861	2	525.7825927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NVIRDAVTY_	ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2	114.8945686534367	0.024290463251177924	6				NaN	NaN	0	NaN	9300	3539	12840
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12842	33.711	NaN	142780	30	0	44090	0.106	+			40353	STTQVVGILK	10	95	523.3155545270937	1044.6165561209873	2	523.3163452148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STTQVVGILK_	ENSG00000198898|ENST00000361183|CAPZA2;ENST00000426421.5_1_7:116544367-116557918:+|nuORF	199.8913184727681	4.3944518732911475E-06	6				NaN	NaN	0	NaN	9301	3539	12840
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12843	33.713	NaN	84673	30	0	10969	0.106	+			44318	TSFDGSLIQK	10	88	548.286730788308	1094.5589086434159	2	548.2879638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TSFDGSLIQK_	ENSG00000177485|ENST00000557385|ZBTB33	190.62248201133156	0.00017197548059753575	6				NaN	NaN	0	NaN	9302	3539	12840
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12844	33.715	NaN	12208	30	0	2422.2	0.106	+			29896	PLNTPGKLGL	10	78	505.3049169368652	1008.5952809405304	2	505.28173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PLNTPGKLGL_	ENST00000493216.1_1_22:20937040-20937274:+|nuORF	24.519189625965996	0.6795976720565101	6				NaN	NaN	0	NaN	9303	3539	12840
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12845	33.717	NaN	9982	30	0	733.16	0.106	+			27235	MELLLVASP	9	88	486.7768249511719	NaN	0	486.7768249511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MELLLVASP_	ATP10D|p.S807L|1|0.45|ENSG00000145246|chr4:47558259-47558259|C/T|missense_variant	76.7741389293348	0.08243745921263976	6				NaN	NaN	0	NaN	9304	3539	12840
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12846	33.719	NaN	38119	30	0	4573.4	0.106	+			46560	VFIDKQTNL	9	89	539.2997450141384	1076.5849370950766	2	539.3009643554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VFIDKQTNL_	ENSG00000048740|ENST00000633077|CELF2;ENSG00000149187|ENST00000687097|CELF1;nc|ENSG00000048740|O95319-2|CELF2;nc|ENSG00000048740|O95319-3|CELF2;nc|ENSG00000048740|O95319-4|CELF2;nc|ENSG00000048740|O95319-5|CELF2;nc|ENSG00000048740|O95319|CELF2;nc|ENSG00000149187|Q92879-2|CELF1;nc|ENSG00000149187|Q92879-3|CELF1;nc|ENSG00000149187|Q92879-4|CELF1;nc|ENSG00000149187|Q92879-5|CELF1;nc|ENSG00000149187|Q92879-6|CELF1;nc|ENSG00000149187|Q92879|CELF1	109.43880257439609	0.029570636687953285	6				NaN	NaN	0	NaN	9305	3539	12840
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12847	33.721	NaN	7556.8	30	0	684.68	0.034	+			49449	VVVPPLPGK	9	76	453.29437255859375	NaN	0	453.29437255859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VVVPPLPGK_	ENSG00000112335|ENST00000230085|SNX3;nc|ENSG00000112335|O60493-2|SNX3;nc|ENSG00000112335|O60493-4|SNX3	40.5726180659479	0.27166212580479165	6				NaN	NaN	0	NaN	9306	3539	12840
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12848	33.721	NaN	8990.6	30	0	896.62	0.143				-1	FFMLLTFPL	9	73	382.2071533203125	NaN	0	382.2071533203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Oxidation (M)	_FFM(Oxidation (M))LLTFPL_	CNNM4|p.L438Pfs*9|1|0.32|ENSG00000158158|chr2:96762305-96762306|-/C|frameshift_variant;ENSG00000158158|ENST00000377075|CNNM4	35.61828744233558	0.29773779453147337	6				NaN	NaN	0	NaN	9307	3539	12840
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12882	33.791	NaN	61150	30	0	20796	0.184	+			5215	ATTSVITIVK	10	97	516.8180201983437	1031.6214874634873	2	516.818603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATTSVITIVK_	ENSG00000198517|ENST00000343242|MAFK	112.2953585152457	0.0411829880542106	6				NaN	NaN	0	NaN	9335	3545	12881
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12883	33.794	NaN	53175	30	0	8677	0.034	+			45746	VADTVARVL	9	96	472.28143733037484	942.5483217275497	2	472.2816467285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VADTVARVL_	ENSG00000145632|ENST00000274289|PLK2	112.41091882917199	0.026537921851008135	6				NaN	NaN	0	NaN	9336	3545	12881
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12895	33.818	NaN	46194	30	0	10362	0.214	+			4818	ATNTVYVFAK	10	92	557.2995344080102	1112.5845158828204	2	557.3007202148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATNTVYVFAK_	ENSG00000047315|ENST00000314595|POLR2B;POLR2B|p.A362Pfs*21|1|0.34|ENSG00000047315|chr4:57005423-57005423|A/-|frameshift_variant;POLR2B|p.K211Rfs*66|1|0.1|ENSG00000047315|chr4:56995302-56995302|A/-|frameshift_variant;POLR2B|p.N1030Sfs*23|1|0.07|ENSG00000047315|chr4:57025384-57025385|-/CT|frameshift_variant;POLR2B|p.P303Tfs*5|1|0.16|ENSG00000047315|chr4:57005248-57005249|-/A|frameshift_variant	178.54760496737404	0.0013825827145267076	6				NaN	NaN	0	NaN	9345	3548	12894
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12896	33.822	NaN	13221	30	0	1216	0.106	+			13041	GEVVKELSV	9	72	480.2735020366424	958.5324511400848	2	480.27374267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEVVKELSV_	ENSG00000050405|ENST00000341247|LIMA1;nc|ENSG00000050405|Q9UHB6-2|LIMA1;nc|ENSG00000050405|Q9UHB6-3|LIMA1;nc|ENSG00000050405|Q9UHB6-4|LIMA1;nc|ENSG00000050405|Q9UHB6-5|LIMA1	126.24258497203832	0.01742065577488747	6				NaN	NaN	0	NaN	9346	3548	12894
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12897	33.824	NaN	11994	30	0	801.06	0.106	+			16288	HEGLVLTKL	9	91	505.3049169368652	1008.5952809405304	2	505.3055419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HEGLVLTKL_	ENSG00000149932|ENST00000279396|TMEM219	76.16968421966216	0.11411088698345859	6				NaN	NaN	0	NaN	9347	3548	12894
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12898	33.826	NaN	12405	30	0	1344.1	0.106	+			49422	VVVAVGRAL	9	70	442.288884749356	882.563216565512	2	442.2891540527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVVAVGRAL_	ENSG00000167986|ENST00000301764|DDB1;ENST00000414411.3_1_11:61081295-61081943:-|nuORF	148.20599733432147	0.007287282186870133	6				NaN	NaN	0	NaN	9348	3548	12894
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12899	33.828	NaN	9364	30	0	748.32	0.106	+			42562	TASESSYQL	9	80	493.2268762024845	NaN	0	493.2269592285156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TASESSYQL_	ENSG00000137501|ENST00000359152|SYTL2;nc|ENSG00000137501|Q9HCH5-12|SYTL2;nc|ENSG00000137501|Q9HCH5-13|SYTL2;nc|ENSG00000137501|Q9HCH5-14|SYTL2;nc|ENSG00000137501|Q9HCH5-2|SYTL2;nc|ENSG00000137501|Q9HCH5-7|SYTL2;nc|ENSG00000137501|Q9HCH5-8|SYTL2;nc|ENSG00000137501|Q9HCH5-9|SYTL2;nc|ENSG00000137501|Q9HCH5|SYTL2;SYTL2|p.Q663Tfs*35|1|0.14|ENSG00000137501|chr11:85709344-85709345|-/T|frameshift_variant	101.25262130126117	0.018912469721856617	6				NaN	NaN	0	NaN	9349	3548	12894
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12900	33.829	NaN	6644.2	30	0	3542.6	0.031				-1	 	0	44	362.74031015932127	723.4660673854426	2	362.7406005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9350	3548	12894
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12901	33.83	NaN	17837	30	0	1919.2	0.14	+			36464	SEVMGEPHL	9	88	499.7335546509099	997.4525563686199	2	499.7337341308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SEVMGEPHL_	ENSG00000132963|ENST00000380842|POMP	60.97194046774394	0.20551255781574032	6				NaN	NaN	0	NaN	9351	3548	12894
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12919	33.869	NaN	25934	30	0	2474.6	0.214	+			28412	NESSVLHTL	9	92	500.2581951504823	998.5018373677647	2	500.25872802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NESSVLHTL_	ENSG00000196535|ENST00000527372|MYO18A;nc|ENSG00000196535|Q92614-2|MYO18A;nc|ENSG00000196535|Q92614-3|MYO18A;nc|ENSG00000196535|Q92614-4|MYO18A	115.49404669440601	0.023927554121326553	6				NaN	NaN	0	NaN	9366	3551	12918
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12920	33.873	NaN	29544	30	0	13374	0.106	+			31515	QLFYLPAKK	9	77	369.889912822325	1106.647909067175	3	369.8901672363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QLFYLPAKK_	ENSG00000185787|ENST00000426013|MORF4L1;ENST00000560710.1_1_15:79184565-79186592:+|nuORF;nc|ENSG00000185787|Q9UBU8-3|MORF4L1;nc|ENSG00000185787|Q9UBU8|MORF4L1	37.81151784470057	0.4459294069877048	6				NaN	NaN	0	NaN	9367	3551	12918
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12921	33.875	NaN	29284	30	0	5632.6	0.106				-1	 	0	77	512.8126649661447	1023.6107769990894	2	512.81298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9368	3551	12918
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12922	33.876	NaN	93782	30	0	30269	0.106				-1	 	0	90	564.3363193490022	1126.6580857648044	2	564.3375854492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9369	3551	12918
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12923	33.878	NaN	23712	30	0	8830.7	0.106	+			45439	TVYEEMMAK	9	75	551.2507097807805	1100.486866628361	2	551.2516479492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TVYEEMMAK_	ENSG00000144659|ENST00000650617|SLC25A38;SLC25A38|p.G301V|1|0.09|ENSG00000144659|chr3:39396507-39396507|G/T|missense_variant	132.757866228626	0.013877640931359021	6				NaN	NaN	0	NaN	9370	3551	12918
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12924	33.88	NaN	10827	30	0	1059.6	0.034	+			2110	ALGLLQDIK	9	88	485.79900329975806	969.5834536663161	2	485.79931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ALGLLQDIK_	ENSG00000154370|ENST00000284551|TRIM11;nc|ENSG00000154370|Q96F44-2|TRIM11;nc|ENSG00000154370|Q96F44-3|TRIM11	84.9155231211612	0.07920012719736333	6				NaN	NaN	0	NaN	9371	3551	12918
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12925	33.881	NaN	16770	30	0	2337.1	0.141	+			17806	IEVENKEVL	9	90	536.7986554124836	NaN	0	536.8085327148438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IEVENKEVL_	ENSG00000173193|ENST00000474629|PARP14;nc|ENSG00000173193|Q460N5-1|PARP14;nc|ENSG00000173193|Q460N5-3|PARP14;nc|ENSG00000173193|Q460N5-4|PARP14;PARP14|p.N1416Efs*19|1|0.2|ENSG00000173193|chr3:122718388-122718389|-/A|frameshift_variant	90.14881205920913	0.04129643690599354	6				NaN	NaN	0	NaN	9372	3551	12918
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12943	33.917	NaN	16723	30	0	2390.5	0.214	+			6082	AVNALQSVY	9	77	482.75808155447845	963.5016101757569	2	482.7585144042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVNALQSVY_	ENSG00000165078|ENST00000297770|CPA6	79.71258880314673	0.09879134589249085	6				NaN	NaN	0	NaN	9387	3554	12942
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12944	33.921	NaN	35251	30	0	4608.5	0.106	+			17807	IEVENKEVL	9	94	536.7986554124836	NaN	0	536.7987060546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IEVENKEVL_	ENSG00000173193|ENST00000474629|PARP14;nc|ENSG00000173193|Q460N5-1|PARP14;nc|ENSG00000173193|Q460N5-3|PARP14;nc|ENSG00000173193|Q460N5-4|PARP14;PARP14|p.N1416Efs*19|1|0.2|ENSG00000173193|chr3:122718388-122718389|-/A|frameshift_variant	102.0615471778698	0.01728177075344923	6				NaN	NaN	0	NaN	9388	3554	12942
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12945	33.923	NaN	22462	30	0	7953.4	0.106	+			29776	PIGLFCDCTF	10	79	558.2481460708872	1114.4817392085743	2	558.24951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PIGLFCDCTF_	CNTNAP4|p.F982L|1|0.08|ENSG00000152910|chr16:76535735-76535735|C/A|missense_variant	44.116797842482775	0.5112108506279902	6				NaN	NaN	0	NaN	9389	3554	12942
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12946	33.925	NaN	41404	30	0	4063.4	0.106			+	26069	LSLRSVASIV	10	96	522.823686148882	1043.6328193645638	2	522.8246459960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSLRSVASIV_	REV__ENSG00000160293|ENST00000371850|VAV2;REV__ENST00000486113.1_1_9:136726494-136857352:-|nuORF;REV__nc|ENSG00000160293|P52735-2|VAV2;REV__nc|ENSG00000160293|P52735-3|VAV2	82.24051045832904	0.17731618517892733	6				NaN	NaN	0	NaN	9390	3554	12942
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12947	33.926	NaN	33445	30	0	9787.6	0.106	+			48675	VTSTFIIEK	9	86	519.2971603871055	1036.5797678410108	2	519.2976684570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTSTFIIEK_	ENSG00000126561|ENST00000590949|STAT5A;ENSG00000173757|ENST00000293328|STAT5B;ENST00000468312.1_1_17:40370167-40384145:-|nuORF;nc|ENSG00000126561|P42229-2|STAT5A;STAT5B|p.H584Tfs*8|3|0.33|ENSG00000173757|chr17:42210428-42210429|-/T|frameshift_variant;STAT5B|p.K583Nfs*16|2|0.34|ENSG00000173757|chr17:42210429-42210429|T/-|frameshift_variant	101.25262130126117	0.03792372629710479	6				NaN	NaN	0	NaN	9391	3554	12942
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12948	33.928	NaN	4133.8	30	0	577.77	0.037			+	-1	KRLAVMIDK	9	63	363.88630711930097	1088.637091958103	3	363.8866882324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_KRLAVM(Oxidation (M))IDK_	REV__ENSG00000174970|ENST00000641071|OR10AG1;REV__nc|ENSG00000174970|Q8NH19|OR10AG1	24.519189625965996	0.574102787014149	6				NaN	NaN	0	NaN	9392	3554	12942
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12949	33.929	NaN	9846	30	0	1565.5	0.142	+			47349	VPDSSGPERIL	11	69	585.3111126124836	1168.6076722917671	2	585.3126831054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VPDSSGPERIL_	ENSG00000165119|ENST00000376263|HNRNPK;nc|ENSG00000165119|P61978-3|HNRNPK;nc|ENSG00000165119|P61978|HNRNPK	66.9202029811203	0.26168278700588427	6				NaN	NaN	0	NaN	9393	3554	12942
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12968	33.967	NaN	229220	30	0	69766	0.161	+			5820	AVIGADSVTLK	11	97	537.3132310916411	1072.6119092500821	2	537.3140258789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVIGADSVTLK_	ENSG00000108651|ENST00000261708|UTP6;ENST00000477860.1_1_17:30200326-30200766:-|nuORF	141.88618038797316	0.0003589065917347258	6				NaN	NaN	0	NaN	9409	3557	12967
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12969	33.97	NaN	377930	30	0	58253	0.106	+			36048	SEISNIARV	9	119	494.77469175650145	987.5348305798029	2	494.77459716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEISNIARV_	ENSG00000016490|ENST00000394711|CLCA1	167.22876102047192	0.0032399547248545047	6				NaN	NaN	0	NaN	9410	3557	12967
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12970	33.972	NaN	33334	30	0	3004.8	0.106	+			44109	TPVGLIVSH	9	96	461.77100876879643	921.5274646043929	2	461.7712707519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TPVGLIVSH_	ENSG00000136718|ENST00000259239|IMP4;ENST00000460766.5_1_2:131100637-131104038:+|nuORF	148.04295825190792	0.0073252839830139265	6				NaN	NaN	0	NaN	9411	3557	12967
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12971	33.974	NaN	12197	30	0	1551.9	0.106	+			12453	GEDEPLHAL	9	73	490.7375915379171	979.4606301426343	2	490.73773193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEDEPLHAL_	ENSG00000168066|ENST00000377390|SF1;nc|ENSG00000168066|Q15637-2|SF1;nc|ENSG00000168066|Q15637-3|SF1;nc|ENSG00000168066|Q15637-4|SF1;nc|ENSG00000168066|Q15637-5|SF1;nc|ENSG00000168066|Q15637-6|SF1;nc|ENSG00000168066|Q15637-7|SF1;SF1|p.V573Sfs*23|1|0.22|ENSG00000168066|chr11:64766025-64766025|G/-|frameshift_variant	94.00642277110589	0.05356993013874309	6				NaN	NaN	0	NaN	9412	3557	12967
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12972	33.976	NaN	12157	30	0	1806.4	0.106				-1	REKIVEVMF	9	85	583.8150023888878	1165.6154518445755	2	583.8160400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_REKIVEVM(Oxidation (M))F_	ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2	52.936696900407355	0.27249468807391813	6				NaN	NaN	0	NaN	9413	3557	12967
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12973	33.977	NaN	9408.1	30	0	3286.4	0.106	+			9417	EKIKGGIHTA	10	54	351.87279541644835	1052.596556849545	3	351.87310791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EKIKGGIHTA_	ENSG00000137996|ENST00000370128|RTCA;nc|ENSG00000137996|O00442-2|RTCA;RTCA|p.G165Vfs*4|1|0.38|ENSG00000137996|chr1:100274840-100274840|G/-|frameshift_variant	24.519189625965996	0.6795976720565101	6				NaN	NaN	0	NaN	9414	3557	12967
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12974	33.979	NaN	6193	30	0	816.71	0.033	+			30005	PPITVTSK	8	62	421.75228917278025	841.4900254123605	2	421.7525634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PPITVTSK_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	134.81075121484326	0.23895231276701365	6				NaN	NaN	0	NaN	9415	3557	12967
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12992	34.014	NaN	25808	30	0	4747.7	0.214	+			15895	HAAGFAYTY	9	89	500.7298552218109	NaN	0	500.72991943359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HAAGFAYTY_	ENSG00000166801|ENST00000675163|FAM111A	60.29395666154354	0.1480651883005104	6				NaN	NaN	0	NaN	9430	3560	12991
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12993	34.018	NaN	19697	30	0	6218.2	0.106	+			25284	LNSLGRPD	8	79	436.23498573267983	870.4554185321597	2	436.2352294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LNSLGRPD_	ENSG00000146085|ENST00000274813|MMUT	71.87747018426188	0.391254423828572	6				NaN	NaN	0	NaN	9431	3560	12991
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12994	34.02	NaN	15463	30	0	1313	0.106	+			27693	MPVGMTHGL	9	100	471.7297993307698	941.4450457283397	2	471.7304992675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MPVGMTHGL_	ENSG00000092203|ENST00000448790|TOX4;nc|ENSG00000092203|O94842-2|TOX4;TOX4|p.G159Vfs*126|1|0.32|ENSG00000092203|chr14:21488743-21488743|G/-|frameshift_variant;TOX4|p.Q486Hfs*16|1|0.55|ENSG00000092203|chr14:21493073-21493073|A/-|frameshift_variant;TOX4|p.T456Dfs*60|1|0.38|ENSG00000092203|chr14:21492975-21492976|-/C|frameshift_variant	73.97473282117947	0.12360187025703594	6				NaN	NaN	0	NaN	9432	3560	12991
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12995	34.022	NaN	20379	30	0	1457.3	0.106	+			28556	NKAIKADV	8	81	429.75535147916617	857.4961500251324	2	429.7558288574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NKAIKADV_	tr|U7T567|U7T567_FUSNU3-oxoacyl-[acyl-carrier-protein]synthase2OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00460PE=3SV=1	49.44154591367651	0.597725784090933	6				NaN	NaN	0	NaN	9433	3560	12991
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12996	34.023	NaN	14310	30	0	1197.5	0.106			+	44372	TSLARPAGPT	10	84	485.76938641440614	NaN	0	485.7694396972656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TSLARPAGPT_	REV__ENSG00000141096|ENST00000268793|DPEP3	49.536043120802724	0.30853568297719935	6				NaN	NaN	0	NaN	9434	3560	12991
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12997	34.025	NaN	4726.5	30	0	560.78	0.037			+	-1	QGPRIPSQMC	10	72	587.2789387713935	1172.543324609587	2	587.2772827148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_QGPRIPSQMC(Carbamidomethyl (C))_	REV__ENSG00000108924|ENST00000226067|HLF;REV__nc|ENSG00000108924|Q16534-2|HLF	32.81241826257853	0.6118718159329168	6				NaN	NaN	0	NaN	9435	3560	12991
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12998	34.026	NaN	9284.8	30	0	2977.6	0.141				-1	EMCILLVI	8	70	475.25816021865546	948.501767504111	2	475.2590026855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_EM(Oxidation (M))CILLVI_	CACNA1E|p.F1412Lfs*21|1|0.36|ENSG00000198216|chr1:181757026-181757027|-/C|frameshift_variant;ENSG00000198216|ENST00000367573|CACNA1E;nc|ENSG00000198216|Q15878-2|CACNA1E;nc|ENSG00000198216|Q15878-3|CACNA1E	44.53106598305862	0.628196326904373	6				NaN	NaN	0	NaN	9436	3560	12991
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13016	34.063	NaN	163660	30	0	118530	0.178				-1	 	0	80	339.2142293547614	1014.6208586644843	3	339.2148742675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9451	3563	13015
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13017	34.066	NaN	37904	30	0	4968.8	0.106	+			29178	NVIRDAVTY	9	86	525.7817754640431	1049.5489979948861	2	525.7833251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NVIRDAVTY_	ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2	109.47833844074708	0.029530294723441826	6				NaN	NaN	0	NaN	9452	3563	13015
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13018	34.068	NaN	27716	30	0	3505.4	0.106			+	25979	LSIVEPKA	8	75	428.7613388824527	855.5081248317055	2	428.76629638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSIVEPKA_	REV__ENSG00000166704|ENST00000551380|ZNF606;REV__ZNF606|p.Y383Ffs*5|1|0.1|ENSG00000166704|chr19:57979534-57979535|-/TGGAGAAAAA|frameshift_variant	68.78682469695295	0.41700713582915416	6				NaN	NaN	0	NaN	9453	3563	13015
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13019	34.07	NaN	17164	30	0	3314.7	0.106				-1	 	0	70	423.26523253325774	844.5159121333155	2	423.265869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9454	3563	13015
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13020	34.071	NaN	20722	30	0	4637.2	0.106				-1	 	0	78	542.323289897427	1082.632026861654	2	542.3248291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9455	3563	13015
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13021	34.073	NaN	8017.1	30	0	774.25	0.106			+	29074	NTKSHQIF	8	81	487.75622880257936	973.4979046719587	2	487.7568664550781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NTKSHQIF_	REV__ENSG00000124570|ENST00000380539|SERPINB6	60.97194046774394	0.49215940876911696	6				NaN	NaN	0	NaN	9456	3563	13015
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13022	34.075	NaN	5522.3	30	0	1442.5	0.038	+			16739	HLPETKFSEL	10	76	600.8156400889018	1199.6167272446035	2	600.8170166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HLPETKFSEL_	ENSG00000112297|ENST00000633556|CRYBG1;nc|ENSG00000112297|Q9Y4K1-1|CRYBG1	53.08895987439943	0.42869529153390606	6				NaN	NaN	0	NaN	9457	3563	13015
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13040	34.111	NaN	38926	30	0	5423.3	0.214	+			12506	GEEKLIASV	9	86	473.2655698583468	944.5165867834936	2	473.2658386230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEEKLIASV_	ENSG00000130713|ENST00000372358|EXOSC2;ENST00000430138.6_1_9:133569178-133570981:+|nuORF;ENST00000463488.1_1_9:133569202-133574940:+|nuORF;ENST00000491115.6_1_9:133569178-133574746:+|nuORF;nc|ENSG00000130713|Q13868-2|EXOSC2;nc|ENSG00000130713|Q13868-3|EXOSC2	98.58198989935565	0.04066992115528678	6				NaN	NaN	0	NaN	9472	3566	13039
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13041	34.115	NaN	12913	30	0	1526.8	0.106	+			486	AAYDSLVVGK	10	83	511.77895167368143	1021.5433504141629	2	511.77947998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAYDSLVVGK_	ENSG00000128283|ENST00000249014|CDC42EP1;nc|ENSG00000128283|Q00587-2|CDC42EP1	117.81106730687013	0.030421278947300796	6				NaN	NaN	0	NaN	9473	3566	13039
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13042	34.117	NaN	26818	30	0	3498.1	0.106	+			50633	YEAVREVL	8	75	489.7659327749078	977.5173126166156	2	489.76617431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YEAVREVL_	ENSG00000198755|ENST00000322203|RPL10A;ENST00000464112.5_1_6:35436546-35438524:+|nuORF;ENST00000467020.5_1_6:35436211-35436817:+|nuORF;ENST00000472730.1_1_3:61728131-61728755:-|nuORF;ENST00000490335.4_1_6:35436211-35436651:+|nuORF;RPL10A|p.P135Lfs*17|1|0.35|ENSG00000198755|chr6:35470270-35470270|C/-|frameshift_variant	82.7504851949679	0.3006553482314138	6				NaN	NaN	0	NaN	9474	3566	13039
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13043	34.119	NaN	16071	30	0	3939.7	0.106	+			1287	AESKNGWTL	9	88	503.25294128336145	1004.4913296335229	2	503.2532653808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AESKNGWTL_	ENSG00000110048|ENST00000263847|OSBP	75.04331003522576	0.118981335847003	6				NaN	NaN	0	NaN	9475	3566	13039
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13044	34.12	NaN	11066	30	0	901.89	0.106			+	27362	MITQYKLN	8	84	505.7695440764272	1009.5245352196545	2	505.7704162597656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MITQYKLN_	REV__tr|U7SPV9|U7SPV9_FUSNUBiopolymertransporterExbDOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01720PE=3SV=1	60.97194046774394	0.49215940876911696	6				NaN	NaN	0	NaN	9476	3566	13039
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13045	34.122	NaN	12710	30	0	5447.3	0.037			+	47656	VSCVGRKPEK	10	72	368.20593624944195	1101.5959793485258	3	368.2062683105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VSCVGRKPEK_	REV__ENST00000533242.1_1_14:24700862-24701497:-|nuORF	30.568863376406313	0.6301935916953115	6				NaN	NaN	0	NaN	9477	3566	13039
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13046	34.123	NaN	7352.8	30	0	338.21	0.14				-1	CVPLPCGGAL	10	76	522.2554691736877	1042.4963854141754	2	522.2557983398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))VPLPC(Carbamidomethyl (C))GGAL_	ENSG00000091128|ENST00000388781|LAMB4;nc|ENSG00000091128|A4D0S4-3|LAMB4	35.200714571348534	0.5923680232273616	6				NaN	NaN	0	NaN	9478	3566	13039
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13064	34.159	NaN	437780	30	0	46964	0.133			+	31975	QRAAEHLQR	9	90	554.8022525888433	1107.5899522444865	2	554.8034057617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QRAAEHLQR_	REV__ENSG00000166839|ENST00000319580|ANKDD1A;REV__nc|ENSG00000166839|Q495B1-1|ANKDD1A;REV__nc|ENSG00000166839|Q495B1-2|ANKDD1A	87.75429964447693	0.0711966946989736	6				NaN	NaN	0	NaN	9493	3569	13063
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13065	34.162	NaN	42387	30	0	12863	0.106				-1	 	0	94	417.1883677989583	1248.543273997075	3	417.1888122558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9494	3569	13063
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13066	34.164	NaN	47542	30	0	8986.6	0.106				-1	 	0	88	501.2842197563865	1000.553886579573	2	501.2848205566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9495	3569	13063
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13067	34.165	NaN	8954.4	30	0	2569.3	0.106			+	4299	ATGIEKIW	8	72	459.2594891572066	916.5044253812132	2	459.25958251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATGIEKIW_	REV__PLEKHA2|p.A295T|2|0.21|ENSG00000169499|chr8:38968637-38968637|G/A|missense_variant	87.75429964447693	0.2842685068779738	6				NaN	NaN	0	NaN	9496	3569	13063
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13068	34.167	NaN	7557.9	30	0	1096.9	0.106				-1	 	0	70	454.26501194178	906.51547095036	2	454.2654724121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9497	3569	13063
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13069	34.169	NaN	6739.3	30	0	989.32	0.106	+			51545	YYDKHFTEF	9	76	625.2796825178236	1248.5448121024472	2	625.2799682617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YYDKHFTEF_	ENSG00000114573|ENST00000273398|ATP6V1A;nc|ENSG00000114573|P38606-2|ATP6V1A	98.62937762414208	0.04060045538121712	6				NaN	NaN	0	NaN	9498	3569	13063
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13070	34.171	NaN	9099.9	30	0	850.06	0.035			+	48953	VVFLFPFF	8	85	508.28833627497676	1014.5621196167535	2	508.2892150878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VVFLFPFF_	REV__ENST00000577827.5_1_18:8122082-8296373:+|nuORF	67.3271909547111	0.42924334279516513	6				NaN	NaN	0	NaN	9499	3569	13063
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13088	34.206	NaN	22110	30	0	1976.7	0.214	+			3051	ASFILGTGK	9	68	447.25718823190823	892.4998235306165	2	447.25775146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASFILGTGK_	CDCA2|p.N847Mfs*14|1|0.15|ENSG00000184661|chr8:25507200-25507200|A/-|frameshift_variant;ENSG00000184661|ENST00000330560|CDCA2;nc|ENSG00000184661|Q69YH5-2|CDCA2	134.7655990226056	0.012935733000282069	6				NaN	NaN	0	NaN	9514	3572	13087
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13089	34.209	NaN	20606	30	0	2688.4	0.106	+			26023	LSLEGKPL	8	80	428.7613388824527	855.5081248317055	2	428.76068115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSLEGKPL_	ENSG00000154783|ENST00000285046|FGD5;FGD5|p.D818*|1|0.19|ENSG00000154783|chr3:14821521-14821522|-/C|frameshift_variant;FGD5|p.T1238Pfs*9|1|0.25|ENSG00000154783|chr3:14922447-14922447|C/-|frameshift_variant	90.36981228632155	0.27635063874291205	6				NaN	NaN	0	NaN	9515	3572	13087
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13090	34.211	NaN	30800	30	0	21302	0.106				-1	 	0	67	345.55787216567353	1033.6517870972207	3	345.5582580566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9516	3572	13087
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13091	34.213	NaN	24434	30	0	12869	0.106	+			46844	VIFKDFVNK	9	68	370.54966594375344	1108.6271684314604	3	370.54974365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VIFKDFVNK_	ENSG00000173821|ENST00000582970|RNF213;ENST00000559070.5_1_17:78261823-78310301:+|nuORF;nc|ENSG00000173821|Q63HN8-4|RNF213;nc|ENSG00000173821|Q63HN8|RNF213;RNF213|p.C5022Lfs*7|1|0.3|ENSG00000173821|chr17:80389237-80389237|G/-|frameshift_variant;RNF213|p.P2167Lfs*64|1|0.09|ENSG00000173821|chr17:80344834-80344835|-/T|frameshift_variant;RNF213|p.Q1953Rfs*50|2|0.13|ENSG00000173821|chr17:80340219-80340219|C/-|frameshift_variant	39.252832667884924	0.4290233611298554	6				NaN	NaN	0	NaN	9517	3572	13087
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13092	34.215	NaN	9487.1	30	0	568.36	0.106			+	9815	EPGEYVIKR	9	86	545.7971830815719	1089.5798132299437	2	545.7984008789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EPGEYVIKR_	REV__ENSG00000123384|ENST00000243077|LRP1;REV__LRP1|p.D1283Ifs*50|1|0.09|ENSG00000123384|chr12:57175962-57175962|G/-|frameshift_variant;REV__LRP1|p.D1366Rfs*54|1|0.17|ENSG00000123384|chr12:57177143-57177144|-/CA|frameshift_variant;REV__LRP1|p.N939Tfs*41|2|0.2|ENSG00000123384|chr12:57166940-57166940|C/-|frameshift_variant;REV__LRP1|p.R3469Gfs*24|2|0.38|ENSG00000123384|chr12:57201552-57201552|C/-|frameshift_variant	84.9155231211612	0.07920012719736333	6				NaN	NaN	0	NaN	9518	3572	13087
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13093	34.217	NaN	13378	30	0	752.2	0.035	+			48268	VTDIDSFIK	9	89	519.2793458638471	1036.544138794494	2	519.2801513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTDIDSFIK_	ENSG00000133401|ENST00000438447|PDZD2;nc|ENSG00000133401|O15018-2|PDZD2;PDZD2|p.D2774Rfs*7|1|0.29|ENSG00000133401|chr5:32101201-32101202|-/G|frameshift_variant;PDZD2|p.E2629Kfs*37|1|0.23|ENSG00000133401|chr5:32097314-32097314|A/-|frameshift_variant;PDZD2|p.K1843Rfs*31|3|0.26|ENSG00000133401|chr5:32088970-32088970|A/-|frameshift_variant;PDZD2|p.S2770Gfs*12|1|0.04|ENSG00000133401|chr5:32101193-32101194|-/GGGT|frameshift_variant;PDZD2|p.V1845Rfs*6|2|0.38|ENSG00000133401|chr5:32088969-32088970|-/A|frameshift_variant	66.42927471994793	0.16001998865088202	6				NaN	NaN	0	NaN	9519	3572	13087
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13094	34.217	NaN	8121.9	30	0	1094.8	0.141	+			45256	TVQELAIYK	9	69	532.8021791152725	1063.5898052973448	2	532.8026733398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TVQELAIYK_	ENSG00000102595|ENST00000376747|UGGT2;nc|ENSG00000102595|Q9NYU1-2|UGGT2;UGGT2|p.N1268Ifs*10|1|0.3|ENSG00000102595|chr13:95859613-95859613|T/-|frameshift_variant	117.81106730687013	0.02252488733980868	6				NaN	NaN	0	NaN	9520	3572	13087
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13112	34.255	NaN	140570	30	0	45672	0.167				-1	 	0	90	564.3363193490022	1126.6580857648044	2	564.3373413085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9535	3575	13111
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13113	34.258	NaN	47898	30	0	5167.3	0.106	+			10175	ESYSVYVYK	9	99	569.2769317786001	1136.539310624	2	569.277099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ESYSVYVYK_	ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;nc|ENSG00000203814|Q5QNW6-2|H2BC18	61.691277971877994	0.19951612995419254	6				NaN	NaN	0	NaN	9536	3575	13111
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13114	34.26	NaN	18924	30	0	1467.9	0.106			+	17810	IEVKDHQF	8	87	508.26325923742246	1014.5119655416449	2	508.26409912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IEVKDHQF_	REV__HSPA1B|p.G24D|1|0.31|ENSG00000204388|chr6:31828021-31828021|G/A|missense_variant	77.31757898189308	0.345924878368729	6				NaN	NaN	0	NaN	9537	3575	13111
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13115	34.262	NaN	7642.8	30	0	2156	0.106				-1	 	0	60	424.7832901685986	847.5520274039973	2	424.78369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9538	3575	13111
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13116	34.264	NaN	28185	30	0	5177.6	0.106	+			47884	VSLGTPIMK	9	83	473.2747195472961	944.5348861613923	2	473.2747802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSLGTPIMK_	ECT2|p.K832Rfs*25|1|0.1|ENSG00000114346|chr3:172815693-172815693|A/-|frameshift_variant;ENSG00000114346|ENST00000392692|ECT2;nc|ENSG00000114346|Q9H8V3-2|ECT2;nc|ENSG00000114346|Q9H8V3-3|ECT2;nc|ENSG00000114346|Q9H8V3-4|ECT2	104.0567914643314	0.03506238181059741	6				NaN	NaN	0	NaN	9539	3575	13111
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13117	34.266	NaN	10556	30	0	1452.6	0.106			+	7170	DAGKIDTVL	9	78	466.2597477886557	930.5049426441115	2	466.2605895996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DAGKIDTVL_	REV__ENSG00000134020|ENST00000256404|PEBP4	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	9540	3575	13111
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13118	34.267	NaN	11471	30	0	1104.2	0.034	+			46445	VESIISPKV	9	91	486.29155734156643	970.5685617499329	2	486.2926330566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VESIISPKV_	ENSG00000164754|ENST00000297338|RAD21;RAD21|p.M287Yfs*6|1|0.04|ENSG00000164754|chr8:116856244-116856245|-/A|frameshift_variant	126.24258497203832	0.01742065577488747	6				NaN	NaN	0	NaN	9541	3575	13111
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13136	34.303	NaN	43850	30	0	9859.3	0.214	+			42878	TEGYQPPPV	9	87	494.2421354693375	986.469718005475	2	494.24237060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEGYQPPPV_	ENSG00000108639|ENST00000225777|SYNGR2;ENST00000592456.1_1_17:76167504-76168014:+|nuORF	101.25262130126117	0.03792372629710479	6				NaN	NaN	0	NaN	9556	3578	13135
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13137	34.307	NaN	26868	30	0	6107.4	0.106	+			37512	SLLGVAATLA	10	72	458.2786868900376	914.5428208468752	2	458.27880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLLGVAATLA_	ENSG00000179271|ENST00000316939|GADD45GIP1	64.20726635412375	0.3275756395432415	6				NaN	NaN	0	NaN	9557	3578	13135
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13138	34.309	NaN	33880	30	0	7968.5	0.106	+			25187	LMAQLDPLF	9	93	524.2810926215941	1046.547632309988	2	524.2841186523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LMAQLDPLF_	ENSG00000159884|ENST00000426546|CCDC107;ENST00000421582.2_2_9:35660480-35660645:+|nuORF;nc|ENSG00000159884|Q8WV48-2|CCDC107;nc|ENSG00000159884|Q8WV48-3|CCDC107;nc|ENSG00000159884|Q8WV48-5|CCDC107	111.64827973302667	0.027316110422332632	6				NaN	NaN	0	NaN	9558	3578	13135
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13139	34.311	NaN	13572	30	0	2613.2	0.106	+			47350	VPDSSGPERIL	11	81	585.3111126124836	1168.6076722917671	2	585.311767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VPDSSGPERIL_	ENSG00000165119|ENST00000376263|HNRNPK;nc|ENSG00000165119|P61978-3|HNRNPK;nc|ENSG00000165119|P61978|HNRNPK	109.82975700811294	0.04036548564786578	6				NaN	NaN	0	NaN	9559	3578	13135
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13140	34.313	NaN	12383	30	0	3893.2	0.106	+			10359	ETVQVLQI	8	81	465.2684900933506	928.5224272535012	2	465.2685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ETVQVLQI_	SPEF1|p.M205I|1|0.36|ENSG00000101222|chr20:3778308-3778308|C/A|missense_variant	56.72105179125745	0.5342425954139568	6				NaN	NaN	0	NaN	9560	3578	13135
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13141	34.314	NaN	11418	30	0	2220.2	0.035	+			1160	AENEYQTAI	9	82	519.7400423553081	1037.4655317774161	2	519.7406616210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AENEYQTAI_	ENSG00000116489|ENST00000263168|CAPZA1;ENSG00000198898|ENST00000361183|CAPZA2;ENST00000426421.5_1_7:116544367-116557918:+|nuORF;ENST00000466066.1_1_1:113202257-113212751:+|nuORF;ENST00000565906.2_1_15:89532752-89533049:-|nuORF	74.1650062923329	0.12277912660386392	6				NaN	NaN	0	NaN	9561	3578	13135
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13142	34.315	NaN	8625.1	30	0	2015	0.141	+			8674	EDVDYVQTF	9	75	558.2481460708872	1114.4817392085743	2	558.2493286132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EDVDYVQTF_	ENSG00000100796|ENST00000554943|PPP4R3A;nc|ENSG00000100796|Q6IN85-2|PPP4R3A;nc|ENSG00000100796|Q6IN85-4|PPP4R3A	42.396135135203025	0.392153681582562	6				NaN	NaN	0	NaN	9562	3578	13135
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13160	34.354	NaN	434390	30	0	102530	0.151	+			14566	GTFLEGVAK	9	88	461.25505833751924	920.4955637418385	2	461.25531005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTFLEGVAK_	ENSG00000174886|ENST00000308961|NDUFA11;ENST00000593233.1_1_19:5894755-5901370:-|nuORF;nc|ENSG00000174886|Q86Y39-2|NDUFA11	148.98678547993487	0.0071052929883181565	6				NaN	NaN	0	NaN	9577	3581	13159
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13161	34.357	NaN	28180	30	0	3252.3	0.106	+			33021	REIAQDFKTDL	11	88	445.9011367731358	1334.6815809196075	3	445.9013977050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_REIAQDFKTDL_	ENSG00000132475|ENST00000254810|H3-3B;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000168148|ENST00000366696|H3-4;ENSG00000183598|ENST00000331491|H3C13;ENSG00000197153|ENST00000359303|H3C12;ENSG00000197409|ENST00000356476|H3C4;ENSG00000203811|ENST00000369158|H3C14;ENSG00000203852|ENST00000403683|H3C15;ENSG00000273983|ENST00000614378|H3C8;ENSG00000274750|ENST00000614911|H3C6;ENSG00000275379|ENST00000616365|H3C11;ENSG00000275714|ENST00000613854|H3C1;ENSG00000277775|ENST00000618052|H3C7;ENSG00000278828|ENST00000685041|H3C10;ENST00000401004.2_1:120904811-120905087:+|nuORF;ENST00000586518.1_1_17:73774674-73775034:-|nuORF;ENST00000593254.1_1_17:73774678-73775846:-|nuORF	55.721020083383095	0.36165090524447163	6				NaN	NaN	0	NaN	9578	3581	13159
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13162	34.359	NaN	6989.9	30	0	717.22	0.106				-1	 	0	82	360.2005656447267	1077.5798675343801	3	360.2010192871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9579	3581	13159
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13163	34.361	NaN	24016	30	0	4773.4	0.106				-1	 	0	82	434.28620048504416	866.5578480368883	2	434.2866516113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9580	3581	13159
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13164	34.363	NaN	6444.2	30	0	860.27	0.106			+	18671	ISYGATSIR	9	75	484.2632270940771	966.5119012549542	2	484.26361083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ISYGATSIR_	REV__ENSG00000135960|ENST00000258443|EDAR;REV__nc|ENSG00000135960|Q9UNE0-2|EDAR	32.81241826257853	0.4965981579233955	6				NaN	NaN	0	NaN	9581	3581	13159
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13165	34.364	NaN	14916	30	0	4739.4	0.106			+	28238	NCVITILAG	9	85	452.25038431383246	902.4862156944649	2	452.25030517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NCVITILAG_	REV__ENHO|p.A12T|1|0.33|ENSG00000168913|chr9:34521662-34521662|C/T|missense_variant	49.44154591367651	0.3095138337212152	6				NaN	NaN	0	NaN	9582	3581	13159
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13166	34.366	NaN	2376.4	30	0	495.36	0.03				-1	 	0	41	341.71543882664173	681.4163247200835	2	341.7158508300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9583	3581	13159
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13184	34.402	NaN	20121	30	0	10173	0.214	+			24223	LESDPLALK	9	74	493.2814732709892	984.5483936087784	2	493.281982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LESDPLALK_	REXO1|p.L1148P|1|0.22|ENSG00000079313|chr19:1816444-1816444|A/G|missense_variant	90.36981228632155	0.0638227155548745	6				NaN	NaN	0	NaN	9598	3584	13183
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13185	34.406	NaN	62041	30	0	10824	0.106	+			20755	KGYTEVLKL	9	114	525.8128216567989	1049.6110903803976	2	525.81396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KGYTEVLKL_	ENSG00000058272|ENST00000450142|PPP1R12A;ENST00000551191.1_1_12:80222078-80226230:-|nuORF;nc|ENSG00000058272|O14974-2|PPP1R12A;nc|ENSG00000058272|O14974-3|PPP1R12A;nc|ENSG00000058272|O14974-4|PPP1R12A;nc|ENSG00000058272|O14974-5|PPP1R12A;PPP1R12A|p.N540Ifs*23|1|0.49|ENSG00000058272|chr12:79807262-79807262|T/-|frameshift_variant	63.42647028704847	0.1850514934184437	6				NaN	NaN	0	NaN	9599	3584	13183
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13186	34.408	NaN	43165	30	0	6094.3	0.106				-1	 	0	97	502.79157619382215	1003.5685994544443	2	502.7924499511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9600	3584	13183
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13187	34.409	NaN	13144	30	0	2230	0.106	+			28750	NPADSISHVAY	11	81	587.2789387713935	1172.543324609587	2	587.28125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NPADSISHVAY_	ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;TRRAP-ASNS|1|fusion;TRRAP-ASNS|2|fusion;TRRAP|p.A1620Cfs*35|1|0.27|ENSG00000196367|chr7:98949499-98949500|-/G|frameshift_variant;TRRAP|p.K3443Sfs*19|1|0.28|ENSG00000196367|chr7:99004246-99004246|A/-|frameshift_variant;TRRAP|p.P1292Lfs*17|1|0.44|ENSG00000196367|chr7:98933258-98933258|C/-|frameshift_variant;TRRAP|p.P1360Afs*14|1|0.05|ENSG00000196367|chr7:98935641-98935642|-/GCAAATAA|frameshift_variant	140.11223852658463	0.0004997379783012748	6				NaN	NaN	0	NaN	9601	3584	13183
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13188	34.411	NaN	13686	30	0	1803.6	0.106				-1	 	0	89	544.2974293545915	1086.5803057759829	2	544.2990112304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9602	3584	13183
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13189	34.413	NaN	2363	30	0	301.1	0.04			+	36110	SEKLSFLFDHI	11	66	668.3512102886141	1334.687867644028	2	668.349365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SEKLSFLFDHI_	REV__ENSG00000113194|ENST00000261942|FAF2	39.873155843976775	0.5596786644756743	6				NaN	NaN	0	NaN	9603	3584	13183
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13190	34.414	NaN	7642.8	30	0	706.93	0.142	+			13767	GQGEIPQGF	9	79	466.7270927298377	931.4396325264754	2	466.72735595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GQGEIPQGF_	ENSG00000203668|ENST00000366553|CHML	47.657333605630114	0.33044192980041115	6				NaN	NaN	0	NaN	9604	3584	13183
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13208	34.453	NaN	12406	30	0	2003.5	0.214				-1	 	0	80	544.2974293545915	1086.5803057759829	2	544.2986450195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9619	3587	13207
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13209	34.457	NaN	6353.6	30	0	912.98	0.106			+	11427	FLTGSLSGVL	10	67	497.283467569229	992.552382205258	2	497.28399658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FLTGSLSGVL_	REV__tr|U7SER3|U7SER3_FUSNUPutativemanganeseeffluxpumpMntPOS=FusobacteriumnucleatumCTI-5OX=1316586GN=mntPPE=3SV=1	49.44154591367651	0.46214596422418036	6				NaN	NaN	0	NaN	9620	3587	13207
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13210	34.459	NaN	6010.6	30	0	1564.4	0.106	+			8228	EAERLWLI	8	80	515.2910655362357	1028.5675781392713	2	515.2911376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EAERLWLI_	ENSG00000109771|ENST00000505916|LRP2BP;LRP2BP|p.A163T|1|0.26|ENSG00000109771|chr4:185374227-185374227|C/T|missense_variant;LRP2BP|p.K257Nfs*24|1|0.12|ENSG00000109771|chr4:185372888-185372888|T/-|frameshift_variant;nc|ENSG00000109771|Q9P2M1-2|LRP2BP	51.33545320467046	0.5859736979383976	6				NaN	NaN	0	NaN	9621	3587	13207
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13211	34.46	NaN	5206.1	30	0	1633.4	0.106	+			4432	ATIHALHFL	9	42	341.531257555646	1021.5719432671381	3	341.531982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATIHALHFL_	ENSG00000143811|ENST00000343818|PYCR2	27.882242232435846	0.5426732730940306	6				NaN	NaN	0	NaN	9622	3587	13207
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13212	34.462	NaN	8657.7	30	0	1478.2	0.106	+			10272	ETLRSGELL	9	77	509.28166969952156	1016.5487864658431	2	509.28228759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ETLRSGELL_	ENSG00000143624|ENST00000318967|INTS3;nc|ENSG00000143624|Q68E01-3|INTS3;nc|ENSG00000143624|Q68E01-4|INTS3;nc|ENSG00000143624|Q68E01|INTS3	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	9623	3587	13207
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13213	34.464	NaN	11764	30	0	1221.7	0.034			+	10430	EVKDFHAK	8	74	487.2580574859009	972.5015620386018	2	487.25885009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EVKDFHAK_	REV__CAPN9|p.G366Afs*15|1|0.38|ENSG00000135773|chr1:230779112-230779112|G/-|frameshift_variant;REV__ENSG00000135773|ENST00000271971|CAPN9;REV__nc|ENSG00000135773|O14815-2|CAPN9	58.78195531508484	0.5138399468736706	6				NaN	NaN	0	NaN	9624	3587	13207
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13214	34.465	NaN	3984.7	30	0	506.71	0.14			+	9073	EGGSRVYEL	9	67	505.251277654822	1008.488002376444	2	505.25128173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EGGSRVYEL_	REV__AXIN2|p.A292Cfs*10|1|0.29|ENSG00000168646|chr17:65549602-65549603|-/A|frameshift_variant;REV__AXIN2|p.G406Rfs*53|1|0.23|ENSG00000168646|chr17:65537820-65537821|-/CT|frameshift_variant;REV__AXIN2|p.G665Afs*24|4|0.35|ENSG00000168646|chr17:65536467-65536467|C/-|frameshift_variant;REV__AXIN2|p.L349Sfs*25|1|0.78|ENSG00000168646|chr17:65541469-65541470|-/A|frameshift_variant;REV__AXIN2|p.L499Pfs*129|1|0.24|ENSG00000168646|chr17:65537540-65537541|-/G|frameshift_variant;REV__AXIN2|p.L688*|1|0.4|ENSG00000168646|chr17:65536399-65536399|G/-|frameshift_variant;REV__AXIN2|p.L688Pfs*19|1|0.25|ENSG00000168646|chr17:65536398-65536399|-/G|frameshift_variant;REV__AXIN2|p.N666Qfs*41|2|0.51|ENSG00000168646|chr17:65536466-65536467|-/C|frameshift_variant;REV__AXIN2|p.R256Efs*13|1|0.55|ENSG00000168646|chr17:65557856-65557857|-/A|frameshift_variant;REV__AXIN2|p.S303Ifs*3|1|0.59|ENSG00000168646|chr17:65549570-65549571|-/A|frameshift_variant;REV__ENSG00000168646|ENST00000307078|AXIN2;REV__ENST00000577662.1_1_17:63534239-63554825:-|nuORF	36.446750945000026	0.4619375763483977	6				NaN	NaN	0	NaN	9625	3587	13207
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13230	34.5	NaN	26304	30	0	5584.7	0.214			+	10685	EYTIWQAK	8	94	519.7661490596622	1037.5177451861243	2	519.2673950195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EYTIWQAK_	REV__ENSG00000184445|ENST00000333479|KNTC1;REV__KNTC1|p.K1646Nfs*2|2|0.35|ENSG00000184445|chr12:122603073-122603073|A/-|frameshift_variant;REV__KNTC1|p.K1646Tfs*12|1|0.13|ENSG00000184445|chr12:122603073-122603074|AA/-|frameshift_variant;REV__KNTC1|p.L1647Tfs*12|1|0.3|ENSG00000184445|chr12:122603072-122603073|-/A|frameshift_variant;REV__KNTC1|p.L554Yfs*3|1|0.11|ENSG00000184445|chr12:122568311-122568311|T/-|frameshift_variant;REV__KNTC1|p.T659Nfs*33|1|0.07|ENSG00000184445|chr12:122571076-122571077|-/A|frameshift_variant	44.116797842482775	0.6307669463330267	6				NaN	NaN	0	NaN	9638	3590	13229
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13231	34.503	NaN	17922	30	0	2184.2	0.106	+			25556	LPVVPKATY	9	85	494.29672266224145	986.5788923912829	2	494.2972717285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LPVVPKATY_	ENSG00000179604|ENST00000335793|CDC42EP4;nc|ENSG00000179604|Q9H3Q1-2|CDC42EP4	82.24051045832904	0.08786059719216216	6				NaN	NaN	0	NaN	9639	3590	13229
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13232	34.505	NaN	11576	30	0	2837.5	0.106	+			14902	GTLSSYIVK	9	70	484.2760284539375	966.537503974675	2	484.2764892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTLSSYIVK_	ENSG00000082068|ENST00000265107|WDR70	136.26810882979174	0.012230845423532208	6				NaN	NaN	0	NaN	9640	3590	13229
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13233	34.507	NaN	12419	30	0	1399.8	0.106	+			39887	STLQVGSLNVK	11	74	573.3289355751751	1144.6433182171502	2	573.330322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STLQVGSLNVK_	ENSG00000063854|ENST00000397356|HAGH;ENST00000569700.5_1_16:1869077-1876788:-|nuORF;nc|ENSG00000063854|Q16775-2|HAGH	153.1020116777495	6.534671767362118E-05	6				NaN	NaN	0	NaN	9641	3590	13229
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13234	34.509	NaN	9965	30	0	1146.9	0.106			+	30433	PYLAHAAPD	9	83	477.736248097448	953.4579432616961	2	477.7373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PYLAHAAPD_	REV__ENSG00000123329|ENST00000393791|ARHGAP9;REV__nc|ENSG00000123329|Q9BRR9-3|ARHGAP9;REV__nc|ENSG00000123329|Q9BRR9-4|ARHGAP9;REV__nc|ENSG00000123329|Q9BRR9|ARHGAP9	60.29395666154354	0.21116425950210296	6				NaN	NaN	0	NaN	9642	3590	13229
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13235	34.511	NaN	4491.3	30	0	496.86	0.033	+			2034	AKQLFSSL	8	58	447.25718823190823	892.4998235306165	2	447.7555847167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AKQLFSSL_	ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC;PRKDC|p.K3681Nfs*6|1|0.32|ENSG00000253729|chr8:47785174-47785177|TTCT/-|frameshift_variant;PRKDC|p.M3670*|1|0.5|ENSG00000253729|chr8:47785212-47785212|T/-|frameshift_variant;PRKDC|p.M3846Cfs*12|1|0.13|ENSG00000253729|chr8:47779047-47779047|T/-|frameshift_variant;PRKDC|p.M4020Cfs*2|1|0.31|ENSG00000253729|chr8:47776968-47776968|T/-|frameshift_variant;PRKDC|p.N3605Kfs*3|1|0.22|ENSG00000253729|chr8:47788993-47788994|-/T|frameshift_variant;PRKDC|p.N4037Ifs*15|1|0.17|ENSG00000253729|chr8:47776916-47776916|T/-|frameshift_variant;PRKDC|p.S3402Ifs*16|1|0.04|ENSG00000253729|chr8:47799302-47799303|-/AAACCGTGAGTTAGAGGAGGTAA|frameshift_variant;PRKDC|p.S4099Qfs*6|1|0.25|ENSG00000253729|chr8:47774265-47774265|A/-|frameshift_variant;PRKDC|p.T3268Pfs*7|1|0.5|ENSG00000253729|chr8:47803426-47803426|T/-|frameshift_variant;PRKDC|p.W3401Cfs*4|1|0.01|ENSG00000253729|chr8:47799304-47799305|-/AATGAATA|frameshift_variant	35.200714571348534	0.6875396545722289	6				NaN	NaN	0	NaN	9643	3590	13229
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13236	34.511	NaN	2906.7	30	0	243.79	0.141			+	46998	VKSQVWSAY	9	65	534.2794335493802	1066.5443141655603	2	534.2802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VKSQVWSAY_	REV__PRSS8|p.I281V|1|0.36|ENSG00000052344|chr16:31132200-31132200|T/C|missense_variant	34.172542307311794	0.4838870758800184	6				NaN	NaN	0	NaN	9644	3590	13229
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13253	34.548	NaN	30354	30	0	4263.9	0.214			+	10686	EYTIWQAK	8	85	519.7661490596622	1037.5177451861243	2	519.26708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EYTIWQAK_	REV__ENSG00000184445|ENST00000333479|KNTC1;REV__KNTC1|p.K1646Nfs*2|2|0.35|ENSG00000184445|chr12:122603073-122603073|A/-|frameshift_variant;REV__KNTC1|p.K1646Tfs*12|1|0.13|ENSG00000184445|chr12:122603073-122603074|AA/-|frameshift_variant;REV__KNTC1|p.L1647Tfs*12|1|0.3|ENSG00000184445|chr12:122603072-122603073|-/A|frameshift_variant;REV__KNTC1|p.L554Yfs*3|1|0.11|ENSG00000184445|chr12:122568311-122568311|T/-|frameshift_variant;REV__KNTC1|p.T659Nfs*33|1|0.07|ENSG00000184445|chr12:122571076-122571077|-/A|frameshift_variant	37.15910966729921	0.6739408393984688	6				NaN	NaN	0	NaN	9658	3593	13252
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13254	34.552	NaN	5717.6	30	0	1110.4	0.106	+			37453	SLILLYFLFI	10	53	414.59010373795263	1240.7484818140579	3	414.5905456542969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLILLYFLFI_	tr|U7T6K0|U7T6K0_FUSNUMotA/TolQ/ExbBprotonchanneldomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00269PE=4SV=1	29.170058357718403	0.6416167986984785	6				NaN	NaN	0	NaN	9659	3593	13252
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13255	34.554	NaN	13595	30	0	1307.7	0.106	+			9181	EGQDVVEAIL	10	81	536.7813394115744	NaN	0	536.7808837890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EGQDVVEAIL_	ENSG00000111602|ENST00000553532|TIMELESS;ENST00000555808.1_1_12:56815681-56815917:-|nuORF;ENST00000557589.1_1_12:56815505-56817595:-|nuORF;nc|ENSG00000111602|Q9UNS1-2|TIMELESS	67.49366992349736	0.17308373824428946	6				NaN	NaN	0	NaN	9660	3593	13252
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13256	34.556	NaN	6707.7	30	0	620.74	0.106	+			47458	VPVSTINHAF	10	76	542.7924096234159	1083.5702663136317	2	542.793212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VPVSTINHAF_	ENSG00000147526|ENST00000317827|TACC1;ENST00000522955.5_1_8:38663104-38684943:+|nuORF;nc|ENSG00000147526|O75410-2|TACC1;nc|ENSG00000147526|O75410-3|TACC1;nc|ENSG00000147526|O75410-4|TACC1;nc|ENSG00000147526|O75410-5|TACC1;nc|ENSG00000147526|O75410-6|TACC1	54.722347961057174	0.4138398245444204	6				NaN	NaN	0	NaN	9661	3593	13252
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13257	34.558	NaN	8993.7	30	0	597.03	0.106				-1	 	0	72	554.8022525888433	1107.5899522444865	2	554.8035888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9662	3593	13252
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13258	34.559	NaN	9759.1	30	0	797.07	0.034	+			51191	YPLAVTKY	8	78	477.7675110142733	953.5204690953466	2	477.76806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YPLAVTKY_	ENSG00000002726|ENST00000360937|AOC1;nc|ENSG00000002726|P19801-2|AOC1	49.44154591367651	0.597725784090933	6				NaN	NaN	0	NaN	9663	3593	13252
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13259	34.56	NaN	5014.4	30	0	904.78	0.14	+			27904	MTSQFADNV	9	70	506.7229962008222	1011.4314394684444	2	506.7237243652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MTSQFADNV_	ENST00000409785.8_1_2:85280528-85280699:+|nuORF	51.19269402634007	0.2889735674168909	6				NaN	NaN	0	NaN	9664	3593	13252
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13277	34.599	NaN	57756	30	0	17851	0.208				-1	 	0	85	564.3363193490022	1126.6580857648044	2	564.3373413085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9679	3596	13276
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13278	34.603	NaN	31237	30	0	4009.7	0.106				-1	 	0	100	502.7552254539256	1003.4958979746513	2	502.755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9680	3596	13276
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13279	34.605	NaN	18365	30	0	1906.4	0.106	+			23285	KYLSGIAHF	9	84	518.2841373404948	1034.5537217477895	2	518.2848510742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KYLSGIAHF_	ENSG00000165688|ENST00000371717|PMPCA;ENST00000371720.5_1_9:139305120-139310743:+|nuORF;PMPCA|p.E101D|1|0.05|ENSG00000165688|chr9:136412518-136412518|A/C|missense_variant	87.75429964447693	0.0711966946989736	6				NaN	NaN	0	NaN	9681	3596	13276
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13280	34.607	NaN	43604	30	0	19445	0.106	+			32236	QTFLLQTTK	9	90	540.3071823860523	1078.5998118389045	2	540.3088989257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QTFLLQTTK_	ENSG00000149480|ENST00000278823|MTA2;MTA2|p.A568Qfs*29|1|0.23|ENSG00000149480|chr11:62594402-62594402|T/-|frameshift_variant;MTA2|p.I556Hfs*8|1|0.29|ENSG00000149480|chr11:62594543-62594544|-/C|frameshift_variant;nc|ENSG00000149480|O94776-2|MTA2	74.1650062923329	0.12277912660386392	6				NaN	NaN	0	NaN	9682	3596	13276
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13281	34.609	NaN	8474.7	30	0	1649.9	0.106				-1	 	0	68	436.2654806100049	870.5164082868098	2	436.26580810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9683	3596	13276
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13282	34.61	NaN	15921	30	0	1062.6	0.106	+			29179	NVIRDAVTY	9	86	525.7817754640431	1049.5489979948861	2	525.7830200195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NVIRDAVTY_	ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2	54.722347961057174	0.257609425301511	6				NaN	NaN	0	NaN	9684	3596	13276
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13283	34.612	NaN	30536	30	0	4430.2	0.035	+			27220	MEKGDMVTL	9	81	512.2450820688225	1022.475611204445	2	512.24609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MEKGDMVTL_	ENSG00000182551|ENST00000327435|ADI1;nc|ENSG00000182551|Q9BV57-2|ADI1	85.86182877749512	0.07653218437724067	6				NaN	NaN	0	NaN	9685	3596	13276
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13299	34.644	NaN	47330	30	0	21289	0.214	+			49890	VYTSGVYHI	9	86	519.7661490596622	1037.5177451861243	2	519.766845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYTSGVYHI_	ENSG00000111077|ENST00000314250|TNS2;ENST00000549311.7_1_12:53443879-53456445:+|nuORF;nc|ENSG00000111077|Q63HR2-2|TNS2;nc|ENSG00000111077|Q63HR2-4|TNS2;nc|ENSG00000111077|Q63HR2-5|TNS2;nc|ENSG00000111077|Q63HR2-6|TNS2;TNS2|p.G362Rfs*43|1|0.33|ENSG00000111077|chr12:53058087-53058088|-/A|frameshift_variant;TNS2|p.K660Nfs*96|1|0.2|ENSG00000111077|chr12:53059615-53059615|G/-|frameshift_variant;TNS2|p.P495Rfs*25|2|0.33|ENSG00000111077|chr12:53059119-53059119|C/-|frameshift_variant	143.01937276914788	0.00906355689373299	6				NaN	NaN	0	NaN	9698	3599	13298
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13300	34.648	NaN	19171	30	0	2027.9	0.106	+			35837	SEDDVKMAL	9	83	504.23839010581395	1006.4622272784279	2	504.23919677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEDDVKMAL_	ENSG00000169813|ENST00000682386|HNRNPF	115.49404669440601	0.023927554121326553	6				NaN	NaN	0	NaN	9699	3599	13298
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13301	34.65	NaN	23040	30	0	2031.6	0.106				-1	 	0	85	477.80206800986156	953.5895830865231	2	477.8024597167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9700	3599	13298
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13302	34.652	NaN	16564	30	0	7845.4	0.106	+			30895	QEKLQVAL	8	72	464.7761830505223	927.5378131678447	2	464.77667236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QEKLQVAL_	ENSG00000132109|ENST00000254436|TRIM21;ENSG00000132274|ENST00000379965|TRIM22;ENST00000480395.5_1_11:5717822-5718591:+|nuORF;nc|ENSG00000132109|P19474-2|TRIM21;nc|ENSG00000132274|Q8IYM9-2|TRIM22;TRIM22|p.S376Tfs*3|1|0.09|ENSG00000132274|chr11:5709277-5709278|-/CATG|frameshift_variant	85.35947970620816	0.2915182781752196	6				NaN	NaN	0	NaN	9701	3599	13298
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13303	34.654	NaN	6179	30	0	1407	0.106	+			12185	GANSLFLEK	9	72	489.7665663861927	977.5185798391855	2	489.7662658691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GANSLFLEK_	ENSG00000183864|ENST00000327492|TOB2	125.71293069911285	0.017741295328254008	6				NaN	NaN	0	NaN	9702	3599	13298
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13304	34.655	NaN	15772	30	0	1087.1	0.034			+	17873	IGADEILKI	9	79	486.29155734156643	970.5685617499329	2	486.2920837402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IGADEILKI_	REV__tr|U7STL3|U7STL3_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01387PE=4SV=1	76.7741389293348	0.11149722112137898	6				NaN	NaN	0	NaN	9703	3599	13298
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13305	34.656	NaN	7540.9	30	0	342.33	0.14	+			40698	SVAVVNLQY	9	77	496.7736158257677	991.5326787183354	2	496.77392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVAVVNLQY_	ENSG00000143224|ENST00000367999|PPOX;ENST00000495483.5_2_1:161137139-161146869:+|nuORF	104.74654710444128	0.034358562718640136	6				NaN	NaN	0	NaN	9704	3599	13298
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13323	34.694	NaN	90969	30	0	11746	0.214			+	12025	FYCRELVAF	9	102	602.7946006972534	1203.5746484613067	2	602.7958374023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_FYC(Carbamidomethyl (C))RELVAF_	REV__ENST00000280330.12_1_5:10227736-10236644:-|nuORF;REV__ENST00000510052.5_1_5:10227736-10249985:-|nuORF	66.42927471994793	0.16001998865088202	6				NaN	NaN	0	NaN	9719	3602	13322
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13324	34.697	NaN	53160	30	0	8818.1	0.106	+			49537	VYANGQHLF	9	86	524.7635492562304	1047.5125455792606	2	524.7642211914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYANGQHLF_	ENSG00000171747|ENST00000307751|LGALS4	173.84880674471344	0.002109945087925744	6				NaN	NaN	0	NaN	9720	3602	13322
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13325	34.699	NaN	9170.9	30	0	1430.7	0.106	+			47853	VSLDYAISK	9	73	498.2731356904924	994.5317184477848	2	498.2738037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSLDYAISK_	ENSG00000181220|ENST00000458143|ZNF746;ENSG00000204946|ENST00000434415|ZNF783;ENST00000472212.5_1_7:149248897-149318218:-|nuORF;ENST00000481762.5_1_7:149260692-149318218:-|nuORF;ENST00000486492.5_1_7:149255763-149318218:-|nuORF;ENST00000493198.5_1_7:149316940-149318218:-|nuORF;nc|ENSG00000181220|Q6NUN9-2|ZNF746;nc|ENSG00000181220|Q6NUN9|ZNF746;nc|ENSG00000204946|Q6ZMS7-1|ZNF783	74.1650062923329	0.12277912660386392	6				NaN	NaN	0	NaN	9721	3602	13322
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13326	34.701	NaN	19746	30	0	2754.8	0.106			+	24327	LFIISHPD	8	67	471.25766126732253	940.5007696014451	2	471.2579040527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LFIISHPD_	REV__B4GALNT3|p.V868M|1|0.2|ENSG00000139044|chr12:558083-558083|G/A|missense_variant;REV__ENSG00000139044|ENST00000266383|B4GALNT3;REV__ENST00000535402.1_1_12:662343-670614:+|nuORF	35.200714571348534	0.6875396545722289	6				NaN	NaN	0	NaN	9722	3602	13322
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13327	34.703	NaN	29172	30	0	2699	0.106	+			33083	REKMTQIMF	9	89	592.30066509527	1182.58677725734	2	592.3018798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_REKMTQIMF_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196604|ENST00000409914|POTEF;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000415776.1_1_Y:19869357-19869702:-|nuORF;ENST00000446382.2_1_9:6834760-6835018:+|nuORF;ENST00000457622.1_1_6:46172676-46173294:+|nuORF;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;nc|ENSG00000204434|Q9BYX7|POTEKP	68.84614121027924	0.14577793175421136	6				NaN	NaN	0	NaN	9723	3602	13322
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13328	34.705	NaN	17968	30	0	3142.3	0.035	+			18347	IQGLSFQLI	9	95	509.8000413089884	1017.5855296847768	2	509.80010986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IQGLSFQLI_	ENSG00000156222|ENST00000394573|SLC28A1	70.8162118820467	0.13725933411854815	6				NaN	NaN	0	NaN	9724	3602	13322
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13329	34.705	NaN	6197.3	30	0	1794	0.141			+	-1	FTQMTCPVF	9	69	558.2481460708872	1114.4817392085743	2	558.249267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))FTQMTCPVF_	REV__ENSG00000221836|ENST00000641693|OR2A5;REV__OR2A5|p.I92N|1|0.1|ENSG00000221836|chr7:144050676-144050676|T/A|missense_variant;REV__OR2A5|p.K263Sfs*23|1|0.28|ENSG00000221836|chr7:144051183-144051183|C/-|frameshift_variant	31.954861631926434	0.5046124803899898	6				NaN	NaN	0	NaN	9725	3602	13322
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13347	34.743	NaN	32564	30	0	6453.5	0.214	+			47407	VPNKVIQCF	9	85	552.7965485485533	1103.5785441639066	2	552.7974243164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_VPNKVIQC(Carbamidomethyl (C))F_	CLTC|p.A1374*|1|0.05|ENSG00000141367|chr17:59683464-59683465|-/TA|frameshift_variant;CLTC|p.D632Yfs*7|1|0.15|ENSG00000141367|chr17:59666589-59666590|-/TTACA|frameshift_variant;ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000141367|Q00610-2|CLTC	133.8126618989323	0.013382794002272486	6				NaN	NaN	0	NaN	9740	3605	13346
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13348	34.747	NaN	36169	30	0	7757.5	0.106	+			31642	QMSLEKKE	8	100	496.7570095204843	991.4994661077686	2	498.2557373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QMSLEKKE_	ENSG00000273559|ENST00000614790|CWC25	51.33545320467046	0.5859736979383976	6				NaN	NaN	0	NaN	9741	3605	13346
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13349	34.749	NaN	23791	30	0	3608.7	0.106	+			49928	VYVERAEVL	9	88	539.3000178913993	1076.5854828495985	2	539.3010864257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYVERAEVL_	ENSG00000089234|ENST00000419234|BRAP	98.58198989935565	0.04066992115528678	6				NaN	NaN	0	NaN	9742	3605	13346
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13350	34.751	NaN	20305	30	0	5435.6	0.106				-1	LRSGCCPLI	9	86	509.7613089020215	1017.508064870843	2	509.7623291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_LRSGCC(Carbamidomethyl (C))PLI_	ENST00000486012.5_1_1:233231420-233297095:-|nuORF	47.657333605630114	0.33044192980041115	6				NaN	NaN	0	NaN	9743	3605	13346
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13351	34.753	NaN	18908	30	0	4659.1	0.106			+	-1	AMICAHAKHY	10	85	406.5240861784707	1216.5504291356121	3	406.5242919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C),Oxidation (M)	_AM(Oxidation (M))IC(Carbamidomethyl (C))AHAKHY_	REV__ENST00000465711.5_1_2:114386183-114394926:+|nuORF	37.81151784470057	0.569310847604193	6				NaN	NaN	0	NaN	9744	3605	13346
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13352	34.754	NaN	8975.1	30	0	600.24	0.034	+			6083	AVNEAILLK	9	79	485.8000021048931	NaN	0	485.7999267578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AVNEAILLK_	ENSG00000158169|ENST00000289081|FANCC;FANCC|p.V449Cfs*22|1|0.07|ENSG00000158169|chr9:95107254-95107254|C/-|frameshift_variant	67.49366992349736	0.1173583512313808	6				NaN	NaN	0	NaN	9745	3605	13346
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13353	34.755	NaN	6073.8	30	0	681.12	0.139	+			5161	ATSVVSFVR	9	79	483.2734242585752	964.5322955839504	2	483.27386474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATSVVSFVR_	ENSG00000162817|ENST00000294889|C1orf115	90.60085204095205	0.06317133949006545	6				NaN	NaN	0	NaN	9746	3605	13346
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13371	34.794	NaN	767900	30	0	237980	0.13	+			4248	ATGDMSGLLK	10	92	496.7570095204843	991.4994661077686	2	496.75823974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATGDMSGLLK_	ENSG00000127837|ENST00000248450|AAMP;ENST00000475678.5_1_2:219131145-219134809:-|nuORF;ENST00000489767.5_1_2:219130391-219134818:-|nuORF	199.8913184727681	4.3944518732911475E-06	6				NaN	NaN	0	NaN	9761	3608	13370
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13372	34.797	NaN	38761	30	0	5297.9	0.106	+			50666	YEEELREL	8	99	540.763886654915	1079.51322037663	2	540.76416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YEEELREL_	ENSG00000175084|ENST00000373960|DES	101.25262130126117	0.2499877059228457	6				NaN	NaN	0	NaN	9762	3608	13370
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13373	34.799	NaN	21412	30	0	4832.1	0.106	+			46490	VETQKTFTL	9	96	533.7916624642	1065.5687719952	2	533.7925415039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VETQKTFTL_	ENSG00000128833|ENST00000261839|MYO5C;ENST00000558902.5_1_15:52548900-52571163:-|nuORF;ENST00000560809.5_1_15:52557394-52562028:-|nuORF;MYO5C|p.E1050Sfs*8|1|0.32|ENSG00000128833|chr15:52229192-52229192|C/-|frameshift_variant;MYO5C|p.I480Nfs*10|1|0.5|ENSG00000128833|chr15:52253414-52253415|-/T|frameshift_variant;MYO5C|p.L1151Wfs*19|1|0.17|ENSG00000128833|chr15:52223719-52223719|A/-|frameshift_variant;MYO5C|p.L933Hfs*33|1|0.04|ENSG00000128833|chr15:52237552-52237553|-/T|frameshift_variant;MYO5C|p.L933Sfs*35|1|0.04|ENSG00000128833|chr15:52237553-52237554|-/AAGTGGA|frameshift_variant;nc|ENSG00000128833|Q9NQX4-2|MYO5C	66.96192283764107	0.15557981141143568	6				NaN	NaN	0	NaN	9763	3608	13370
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13374	34.8	NaN	15212	30	0	1457.4	0.106	+			2276	ALYGVVNVK	9	81	481.7859358835632	961.5573188339264	2	481.7867126464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ALYGVVNVK_	ENSG00000135108|ENST00000622495|FBXO21;nc|ENSG00000135108|O94952|FBXO21	85.35947970620816	0.07794846947388434	6				NaN	NaN	0	NaN	9764	3608	13370
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13375	34.802	NaN	12577	30	0	2020.6	0.106	+			41930	SVVNSFIEK	9	84	511.7787705145413	1021.5429880958826	2	511.7796630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVVNSFIEK_	ENSG00000136159|ENST00000258662|NUDT15;NUDT15|p.N117Mfs*25|1|0.37|ENSG00000136159|chr13:48041105-48041105|A/-|frameshift_variant	91.26522074875469	0.06129826844580791	6				NaN	NaN	0	NaN	9765	3608	13370
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13376	34.804	NaN	25604	30	0	2443.2	0.106	+			11513	FPDKPITQY	9	87	554.7868621778697	1107.5591714225393	2	554.7877807617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FPDKPITQY_	ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656-2|DDOST;nc|ENSG00000244038|P39656-3|DDOST;nc|ENSG00000244038|P39656|DDOST	93.5975768576971	0.05472259948179787	6				NaN	NaN	0	NaN	9766	3608	13370
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13377	34.806	NaN	13803	30	0	2294.3	0.034	+			17902	IGFVEKLQ	8	65	467.27283164140795	932.5311103496159	2	467.2732849121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IGFVEKLQ_	ENSG00000036549|ENST00000370801|ZZZ3;ENST00000476275.5_1_1:78046613-78098535:-|nuORF;nc|ENSG00000036549|Q8IYH5-2|ZZZ3;nc|ENSG00000036549|Q8IYH5-3|ZZZ3;nc|ENSG00000036549|Q8IYH5-4|ZZZ3	57.81127852772723	0.5234495074909924	6				NaN	NaN	0	NaN	9767	3608	13370
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13395	34.84	NaN	36558	30	0	5000.7	0.214	+			12579	GEGVKLQVM	9	88	480.76207473109434	959.5095965289887	2	480.76275634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEGVKLQVM_	ENSG00000065427|ENST00000302445|KARS1;ENST00000451871.1_1_13:42499863-42500601:+|nuORF;ENST00000566560.5_1_16:75668010-75682538:-|nuORF;nc|ENSG00000065427|Q15046-2|KARS1	85.16082228582465	0.07850854922700509	6				NaN	NaN	0	NaN	9782	3611	13394
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13396	34.844	NaN	57881	30	0	28674	0.106	+			30491	QAFAQVFNK	9	94	526.7796283088666	1051.544703684533	2	526.7804565429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QAFAQVFNK_	BZW1|p.N285Tfs*11|2|0.26|ENSG00000082153|chr2:200818782-200818782|A/-|frameshift_variant;BZW1|p.N286*|1|0.04|ENSG00000082153|chr2:200818790-200818791|-/T|frameshift_variant;BZW1|p.S325Rfs*19|1|0.04|ENSG00000082153|chr2:200819989-200819990|-/ACAATATAGAA|frameshift_variant;ENSG00000082153|ENST00000409600|BZW1;nc|ENSG00000082153|Q7L1Q6-2|BZW1;nc|ENSG00000082153|Q7L1Q6-3|BZW1;nc|ENSG00000082153|Q7L1Q6-4|BZW1	181.80572006810442	0.001114768557639603	6				NaN	NaN	0	NaN	9783	3611	13394
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13397	34.846	NaN	12576	30	0	1727.7	0.106	+			46314	VEKGFTPSL	9	78	489.2688110485172	NaN	0	489.2690124511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VEKGFTPSL_	ENSG00000197142|ENST00000354655|ACSL5;ENST00000495539.5_1_10:114169305-114171667:+|nuORF;nc|ENSG00000197142|Q9ULC5-3|ACSL5;nc|ENSG00000197142|Q9ULC5-4|ACSL5	96.66504779109242	0.02816047575905831	6				NaN	NaN	0	NaN	9784	3611	13394
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13398	34.848	NaN	7490.4	30	0	820.08	0.106				-1	KSFNNCTRF	9	79	587.2789387713935	1172.543324609587	2	587.2760620117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_KSFNNC(Carbamidomethyl (C))TRF_	ENSG00000155592|ENST00000328086|ZKSCAN2;ENST00000569150.1_1_16:25251139-25264321:-|nuORF;ZKSCAN2|p.E893A|1|0.39|ENSG00000155592|chr16:25240042-25240042|T/G|missense_variant	39.252832667884924	0.4290233611298554	6				NaN	NaN	0	NaN	9785	3611	13394
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13399	34.849	NaN	6458.2	30	0	592.9	0.106	+			19173	IYSTKLYRF	9	74	595.8311694827207	1189.6477860322414	2	595.8331298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IYSTKLYRF_	ENSG00000148925|ENST00000278174|BTBD10;ENST00000549824.1_1_12:53143198-53143681:+|nuORF;nc|ENSG00000148925|Q9BSF8-2|BTBD10	117.81106730687013	0.02252488733980868	6				NaN	NaN	0	NaN	9786	3611	13394
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13400	34.851	NaN	12734	30	0	4427.8	0.038	+			19174	IYSTKLYRF	9	51	397.55684768139986	1189.6487136443995	3	397.5573425292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IYSTKLYRF_	ENSG00000148925|ENST00000278174|BTBD10;ENST00000549824.1_1_12:53143198-53143681:+|nuORF;nc|ENSG00000148925|Q9BSF8-2|BTBD10	56.43379154798735	0.2433427591689151	6				NaN	NaN	0	NaN	9787	3611	13394
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13401	34.852	NaN	21295	30	0	1604	0.141			+	7518	DGPVMQGLRI	10	89	543.2926171109825	NaN	0	543.292724609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DGPVMQGLRI_	REV__ENST00000332012.5_1_17:79278372-79278921:-|nuORF;REV__nc|ENSG00000185168|Q8N8I6|LINC00482	56.72105179125745	0.2610545891966633	6				NaN	NaN	0	NaN	9788	3611	13394
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13419	34.89	NaN	71004	30	0	21161	0.198	+			14577	GTFSKLFGK	9	97	492.778853396873	983.543153860546	2	492.779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTFSKLFGK_	ENSG00000188112|ENST00000341865|C6orf132;nc|nan|Q5T0Z8-2|C6orf132;nc|nan|Q5T0Z8-4|C6orf132	129.42129120953632	0.01549634589885217	6				NaN	NaN	0	NaN	9803	3614	13418
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13420	34.894	NaN	27398	30	0	3231.5	0.106	+			27586	MPKRKSPE	8	84	486.7681400179543	NaN	0	486.7681884765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MPKRKSPE_	ENSG00000118418|ENST00000620514|HMGN3;nc|ENSG00000118418|Q15651-2|HMGN3;nc|ENSG00000118418|Q15651|HMGN3	99.37495909608758	1.7418937515398478	6				NaN	NaN	0	NaN	9804	3614	13418
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13421	34.896	NaN	20596	30	0	6952.9	0.106			+	-1	VMCAKPLVLE	10	66	387.21170528291384	1158.6132864489416	3	387.2120056152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_VMC(Carbamidomethyl (C))AKPLVLE_	REV__BIRC6|p.I2261Yfs*13|1|0.3|ENSG00000115760|chr2:32476268-32476268|A/-|frameshift_variant;REV__BIRC6|p.K3585Sfs*8|1|0.32|ENSG00000115760|chr2:32515171-32515171|A/-|frameshift_variant;REV__BIRC6|p.P1736Qfs*17|1|0.37|ENSG00000115760|chr2:32464770-32464770|C/-|frameshift_variant;REV__BIRC6|p.R1406Dfs*3|1|0.35|ENSG00000115760|chr2:32442431-32442431|C/-|frameshift_variant;REV__BIRC6|p.S2648Ffs*25|1|0.08|ENSG00000115760|chr2:32487769-32487770|-/T|frameshift_variant;REV__BIRC6|p.S3504Mfs*5|1|0.15|ENSG00000115760|chr2:32513095-32513098|TAGT/-|frameshift_variant;REV__BIRC6|p.T1339Qfs*21|1|0.44|ENSG00000115760|chr2:32442131-32442131|A/-|frameshift_variant;REV__ENSG00000115760|ENST00000421745|BIRC6	23.52269567125451	0.6877354443478558	6				NaN	NaN	0	NaN	9805	3614	13418
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13422	34.898	NaN	13001	30	0	5962	0.106			+	33560	RLFYSMLTY	9	72	597.3050526105502	1192.5955522879003	2	597.30615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RLFYSMLTY_	REV__ENST00000407924.2_1_6:27705341-27705923:-|nuORF	38.80614096846853	0.43426287593479557	6				NaN	NaN	0	NaN	9806	3614	13418
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13423	34.899	NaN	11271	30	0	3955	0.106			+	2369	ANDKKGFWN	9	83	540.267407309701	NaN	0	540.2672729492188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ANDKKGFWN_	REV__tr|U7T719|U7T719_FUSNUPhagetailtapemeasureprotein,TP901family,coreregionOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00086PE=4SV=1	34.172542307311794	0.30503706118289736	6				NaN	NaN	0	NaN	9807	3614	13418
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13424	34.901	NaN	7295.1	30	0	891.34	0.106	+			36484	SEVTAALRV	9	66	473.2709763908315	944.527399848463	2	473.27142333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SEVTAALRV_	EEF2|p.E241Rfs*13|1|0.26|ENSG00000167658|chr19:3982316-3982316|C/-|frameshift_variant;ENSG00000167658|ENST00000309311|EEF2	82.7504851949679	0.08565546331141553	6				NaN	NaN	0	NaN	9808	3614	13418
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13425	34.903	NaN	24709	30	0	3329.4	0.035	+			10193	ETDFRNLL	8	81	504.2603177252243	1006.5060825172486	2	504.2616882324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ETDFRNLL_	MER49_dup1305|chr21:41210187-41211078:+|1.209497246225798|0.4412608656295442|1.45|483.0|23|3|sense	79.71258880314673	0.32596852995588826	6				NaN	NaN	0	NaN	9809	3614	13418
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13443	34.941	NaN	32790	30	0	6552.5	0.214	+			2423	APEEHPVLL	9	82	502.7735645214111	1003.5325761096223	2	502.7740478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_APEEHPVLL_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF	152.47061609516894	0.006293267927334181	6				NaN	NaN	0	NaN	9824	3617	13442
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13444	34.944	NaN	11441	30	0	1351.9	0.106	+			10755	FAENGTVQY	9	79	514.7373048963038	1027.4600568594076	2	514.738037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FAENGTVQY_	ENSG00000100417|ENST00000216259|PMM1;ENST00000472620.5_1_22:41980283-41985061:-|nuORF;ENST00000478337.1_1_22:41980122-41985809:-|nuORF;ENST00000482178.5_1_22:41980283-41980722:-|nuORF;ENST00000485648.5_1_22:41980283-41985809:-|nuORF;PMM1|p.E103Sfs*6|1|0.05|ENSG00000100417|chr22:41584348-41584348|C/-|frameshift_variant	118.74307786436346	0.02196067127630568	6				NaN	NaN	0	NaN	9825	3617	13442
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13445	34.946	NaN	9117	30	0	458.42	0.106			+	47612	VRVVTEPTVY	10	89	581.8255279249125	1161.636502916625	2	581.8270874023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VRVVTEPTVY_	REV__CON__Q9N2I2	49.44154591367651	0.46214596422418036	6				NaN	NaN	0	NaN	9826	3617	13442
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13446	34.948	NaN	13059	30	0	4075.1	0.106			+	3608	ASVSSPSQTMQ	11	80	561.7571159080977	1121.4996788829953	2	561.7573852539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASVSSPSQTMQ_	REV__nc|ENSG00000243290|A0A0C4DH73|IGKV1-12;REV__nc|ENSG00000278857|P01611|IGKV1D-12	67.49366992349736	0.25663419177724	6				NaN	NaN	0	NaN	9827	3617	13442
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13447	34.95	NaN	5244.3	30	0	649.25	0.106				-1	 	0	68	450.77854013688574	899.5425273405715	2	450.7789306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9828	3617	13442
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13448	34.952	NaN	8080.9	30	0	866.37	0.036	+			20494	KEYVGIVRL	9	82	538.8271946788027	1075.6398364244053	2	538.8272094726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KEYVGIVRL_	ENSG00000130826|ENST00000369550|DKC1;nc|ENSG00000130826|O60832-2|DKC1	72.87924865735499	0.12833875048249987	6				NaN	NaN	0	NaN	9829	3617	13442
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13449	34.952	NaN	3799.4	30	0	276.95	0.139	+			25480	LPSADSVQY	9	64	490.2397935530902	978.4650341729804	2	490.239990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LPSADSVQY_	ENSG00000155561|ENST00000285968|NUP205;NUP205|p.F1204Lfs*34|1|0.12|ENSG00000155561|chr7:135617163-135617163|T/-|frameshift_variant;NUP205|p.Q1211Kfs*27|1|0.25|ENSG00000155561|chr7:135617188-135617188|C/-|frameshift_variant;NUP205|p.R582H|2|0.23|ENSG00000155561|chr7:135593107-135593107|G/A|missense_variant	42.396135135203025	0.392153681582562	6				NaN	NaN	0	NaN	9830	3617	13442
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13467	34.992	NaN	30396	30	0	8861	0.215				-1	 	0	88	564.3363193490022	1126.6580857648044	2	564.33740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9845	3620	13466
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13468	34.995	NaN	24149	30	0	4707.1	0.106	+			42384	TAIRALETY	9	89	519.2847565896333	1036.5549602460665	2	519.2852783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAIRALETY_	ELL2|p.H478Afs*4|1|0.2|ENSG00000118985|chr5:95898334-95898335|-/T|frameshift_variant;ELL2|p.K468Nfs*8|1|0.32|ENSG00000118985|chr5:95898361-95898361|T/-|frameshift_variant;ENSG00000118985|ENST00000237853|ELL2;ENST00000506628.1_1_5:95242411-95297425:-|nuORF;nc|ENSG00000118985|O00472-2|ELL2	88.1336951990783	0.07012705547711102	6				NaN	NaN	0	NaN	9846	3620	13466
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13469	34.997	NaN	22688	30	0	2052.4	0.106				-1	 	0	91	478.7917972617088	955.5690415902176	2	478.7921447753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9847	3620	13466
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13470	34.999	NaN	5381.1	30	0	2084.5	0.106			+	-1	VSSRRKPPC	9	52	362.865465333815	1085.574566601645	3	362.86578369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_VSSRRKPPC(Carbamidomethyl (C))_	REV__ENSG00000143147|ENST00000682931|GPR161;REV__ENST00000478868.1_1_1:168054771-168056967:-|nuORF;REV__nc|ENSG00000143147|Q8N6U8-3|GPR161;REV__nc|ENSG00000143147|Q8N6U8-4|GPR161;REV__nc|ENSG00000143147|Q8N6U8-5|GPR161;REV__nc|ENSG00000143147|Q8N6U8-6|GPR161	26.69291269510374	0.5537881896960711	6				NaN	NaN	0	NaN	9848	3620	13466
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13471	35.001	NaN	4808.2	30	0	667.42	0.106			+	24203	LERALGALA	9	60	457.27651360845255	NaN	0	457.2764587402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LERALGALA_	REV__ENSG00000173269|ENST00000372027|MMRN2	65.80317337860623	0.12456833308499304	6				NaN	NaN	0	NaN	9849	3620	13466
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13472	35.003	NaN	4042.8	30	0	270.08	0.037	+			51235	YPVKYTQTF	9	75	573.7941162200682	1145.5736795069363	2	573.79541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YPVKYTQTF_	ENSG00000112378|ENST00000421351|PERP	75.04331003522576	0.118981335847003	6				NaN	NaN	0	NaN	9850	3620	13466
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13473	35.003	NaN	6176	30	0	1027.7	0.146	+			27660	MPSKVVILRY	10	59	402.5735769322009	1204.6989013968027	3	402.57391357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MPSKVVILRY_	ENSG00000122966|ENST00000392521|CIT;ENST00000537607.5_1_12:120126039-120222037:-|nuORF;ENST00000545913.5_1_12:120126039-120222037:-|nuORF;nc|ENSG00000122966|O14578-3|CIT;nc|ENSG00000122966|O14578|CIT	37.50817390946774	0.5721060100277453	6				NaN	NaN	0	NaN	9851	3620	13466
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13491	35.041	NaN	76990	30	0	56901	0.214				-1	 	0	70	379.2092879798969	756.4040230265938	2	379.2095031738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9866	3623	13490
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13492	35.045	NaN	29897	30	0	3908.2	0.106				-1	 	0	91	478.80998494217044	955.6054169511409	2	478.8104248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9867	3623	13490
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13493	35.047	NaN	24934	30	0	4420.4	0.106	+			37356	SLFEGSLSK	9	83	484.2582254775572	NaN	0	484.2582702636719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLFEGSLSK_	ENSG00000092140|ENST00000206595|G2E3;ENST00000468439.2_1_3:132106687-132107131:+|nuORF	59.93077597824379	0.14961415694175798	6				NaN	NaN	0	NaN	9868	3623	13490
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13494	35.049	NaN	22318	30	0	4070.4	0.106				-1	 	0	77	463.7500199473834	925.4854869615668	2	463.7503967285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9869	3623	13490
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13495	35.051	NaN	16504	30	0	1692.6	0.106				-1	 	0	91	547.3248194634473	1092.6350859936945	2	547.3258056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9870	3623	13490
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13496	35.052	NaN	8492.2	30	0	814.19	0.037	+			50783	YEMEVSQRL	9	74	577.7779374727619	1153.5413220123237	2	577.7791137695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YEMEVSQRL_	ENSG00000102910|ENST00000285737|LONP2;LONP2|p.D678Efs*7|1|0.07|ENSG00000102910|chr16:48347601-48347602|-/GT|frameshift_variant;nc|ENSG00000102910|Q86WA8-2|LONP2	76.16968421966216	0.11411088698345859	6				NaN	NaN	0	NaN	9871	3623	13490
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13497	35.053	NaN	9277.7	30	0	496.31	0.14	+			29180	NVIRDAVTY	9	83	525.78278197482	NaN	0	525.7822265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NVIRDAVTY_	ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2	44.377184641726394	0.24544280798894275	6				NaN	NaN	0	NaN	9872	3623	13490
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13515	35.091	NaN	150430	30	0	13447	0.164				-1	 	0	103	539.8280837910429	1077.6416146488857	2	539.8290405273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9887	3626	13514
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13516	35.094	NaN	42156	30	0	11938	0.106			+	39849	STLLPLQR	8	75	464.2846334802418	926.5547140272836	2	464.284423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STLLPLQR_	REV__ENSG00000165271|ENST00000297990|NOL6;REV__nc|ENSG00000165271|Q9H6R4-2|NOL6;REV__nc|ENSG00000165271|Q9H6R4-4|NOL6;REV__NOL6|p.Q953Kfs*32|4|0.2|ENSG00000165271|chr9:33464084-33464084|G/-|frameshift_variant	76.84663266511073	0.3498490246073164	6				NaN	NaN	0	NaN	9888	3626	13514
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13517	35.096	NaN	18765	30	0	2068.5	0.106	+			25309	LPAPPTQNM	9	84	484.74572922031666	967.4769055074333	2	484.74658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LPAPPTQNM_	ENSG00000141380|ENST00000415083|SS18;ENSG00000184402|ENST00000331758|SS18L1;nc|ENSG00000141380|Q15532-2|SS18;nc|ENSG00000184402|O75177-2|SS18L1;nc|ENSG00000184402|O75177-5|SS18L1;SS18|p.G113Vfs*11|1|0.35|ENSG00000141380|chr18:26057636-26057636|C/-|frameshift_variant	104.74654710444128	0.034358562718640136	6				NaN	NaN	0	NaN	9889	3626	13514
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13518	35.098	NaN	13553	30	0	1251	0.106	+			3067	ASFPKVFIK	9	84	518.8126260055102	1035.6106990778203	2	518.8134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASFPKVFIK_	ENSG00000112234|ENST00000369244|FBXL4	60.11826168202944	0.21262886028301267	6				NaN	NaN	0	NaN	9890	3626	13514
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13519	35.1	NaN	17174	30	0	2234.2	0.106	+			51231	YPVEIHEY	8	87	525.2500848646969	1048.4856167961937	2	525.250732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YPVEIHEY_	C1D|p.W68Gfs*16|1|0.11|ENSG00000197223|chr2:68046347-68046347|A/-|frameshift_variant;ENSG00000197223|ENST00000410067|C1D;ENST00000485709.1_1_2:68273401-68290109:-|nuORF	106.41520541750704	0.2471395129373963	6				NaN	NaN	0	NaN	9891	3626	13514
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13520	35.101	NaN	7394.3	30	0	678.34	0.106				-1	DLCFSTSIV	9	75	521.2490125135328	1040.4834720938654	2	521.2501220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_DLC(Carbamidomethyl (C))FSTSIV_	ENSG00000178358|ENST00000317834|OR2D3	44.116797842482775	0.37197099687881774	6				NaN	NaN	0	NaN	9892	3626	13514
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13521	35.103	NaN	9938.6	30	0	1366.5	0.036			+	27945	MVGLREEEE	9	76	546.2542477721422	NaN	0	546.2540893554688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MVGLREEEE_	REV__ENST00000377548.2_1_9:44870104-44870314:+|nuORF	37.15910966729921	0.2899585034171616	6				NaN	NaN	0	NaN	9893	3626	13514
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13539	35.139	NaN	95809	30	0	14417	0.208	+			24110	LEKLNQQLL	9	94	549.8287028295013	1097.6428527258024	2	549.829833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LEKLNQQLL_	ENSG00000173230|ENST00000614479|GOLGB1;nc|ENSG00000173230|Q14789-2|GOLGB1;nc|ENSG00000173230|Q14789-3|GOLGB1;nc|ENSG00000173230|Q14789-4|GOLGB1;nc|ENSG00000173230|Q14789|GOLGB1	85.16082228582465	0.07850854922700509	6				NaN	NaN	0	NaN	9908	3629	13538
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13540	35.142	NaN	11021	30	0	634.38	0.106	+			42362	TAIEKVVQM	9	88	509.78302045116914	1017.5514879691383	2	509.7838439941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAIEKVVQM_	ENSG00000142627|ENST00000358432|EPHA2	78.26377905018397	0.10505600812668463	6				NaN	NaN	0	NaN	9909	3629	13538
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13541	35.144	NaN	3566.1	30	0	1577.1	0.106				-1	 	0	36	327.2020574943969	652.3895620555938	2	327.2026672363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9910	3629	13538
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13542	35.146	NaN	31068	30	0	4238.2	0.106				-1	 	0	79	460.2526953835549	918.4908378339098	2	460.25311279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9911	3629	13538
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13543	35.148	NaN	7338.6	30	0	1113.3	0.106	+			27535	MPAETIKEL	9	76	516.2749184545972	1030.5352839759944	2	516.276123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MPAETIKEL_	ENSG00000122870|ENST00000373886|BICC1;nc|ENSG00000122870|Q9H694-2|BICC1	90.60085204095205	0.06317133949006545	6				NaN	NaN	0	NaN	9912	3629	13538
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13544	35.15	NaN	7113.6	30	0	1267.9	0.106	+			4249	ATGDMSGLLK	10	70	496.7570095204843	991.4994661077686	2	496.75762939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATGDMSGLLK_	ENSG00000127837|ENST00000248450|AAMP;ENST00000475678.5_1_2:219131145-219134809:-|nuORF;ENST00000489767.5_1_2:219130391-219134818:-|nuORF	46.45678178249821	0.4896490706773647	6				NaN	NaN	0	NaN	9913	3629	13538
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13545	35.152	NaN	7710.7	30	0	864.23	0.037	+			10612	EYMKVQTEI	9	77	570.784185894155	NaN	0	570.7843627929688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EYMKVQTEI_	ENSG00000135341|ENST00000369329|MAP3K7;nc|ENSG00000135341|O43318-2|MAP3K7	163.1509380574825	0.013195146407114593	6				NaN	NaN	0	NaN	9914	3629	13538
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13563	35.189	NaN	32182	30	0	2973	0.214	+			11514	FPDKPITQY	9	97	554.7868621778697	1107.5591714225393	2	554.7877807617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FPDKPITQY_	ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656-2|DDOST;nc|ENSG00000244038|P39656-3|DDOST;nc|ENSG00000244038|P39656|DDOST	114.8945686534367	0.024290463251177924	6				NaN	NaN	0	NaN	9929	3632	13562
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13564	35.193	NaN	39460	30	0	4043	0.106	+			28268	NDTNLIPTI	9	94	500.76856899907244	999.5225850649449	2	500.76885986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NDTNLIPTI_	FUT9|p.K229T|1|0.3|ENSG00000172461|chr6:96203841-96203841|A/C|missense_variant	80.45461616416974	0.09558281504443908	6				NaN	NaN	0	NaN	9930	3632	13562
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13565	35.195	NaN	12726	30	0	1239.3	0.106	+			925	AEIEQYRL	8	82	511.2674289015192	1020.5203048698385	2	511.26910400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEIEQYRL_	ENSG00000136888|ENST00000374050|ATP6V1G1	82.7504851949679	0.3006553482314138	6				NaN	NaN	0	NaN	9931	3632	13562
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13566	35.197	NaN	7372.5	30	0	444.25	0.106	+			12444	GEAVELRSL	9	78	487.2685910457983	972.5226291583966	2	487.26885986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEAVELRSL_	ENSG00000157870|ENST00000419916|PRXL2B;nc|ENSG00000157870|Q8TBF2-2|PRXL2B;nc|ENSG00000157870|Q8TBF2-3|PRXL2B;nc|ENSG00000157870|Q8TBF2-4|PRXL2B;nc|ENSG00000157870|Q8TBF2-6|PRXL2B;nc|ENSG00000157870|Q8TBF2-7|PRXL2B	70.8162118820467	0.13725933411854815	6				NaN	NaN	0	NaN	9932	3632	13562
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13567	35.198	NaN	15355	30	0	1678.5	0.106	+			46351	VEKPSPLTL	9	80	492.291891391111	982.569229849022	2	492.29217529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VEKPSPLTL_	ENSG00000129083|ENST00000439561|COPB1	54.722347961057174	0.257609425301511	6				NaN	NaN	0	NaN	9933	3632	13562
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13568	35.2	NaN	6612.3	30	0	476.81	0.035				-1	 	0	73	495.2453172024713	494.2380407358713	1	495.2456970214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9934	3632	13562
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13569	35.201	NaN	5028.3	30	0	496.6	0.141			+	28606	NKQTKYILL	9	77	560.8391946313703	1119.6638363295406	2	560.8404541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NKQTKYILL_	REV__ENSG00000091039|ENST00000261183|OSBPL8;REV__nc|ENSG00000091039|Q9BZF1-2|OSBPL8;REV__nc|ENSG00000091039|Q9BZF1-3|OSBPL8;REV__OSBPL8|p.F644Lfs*25|1|0.34|ENSG00000091039|chr12:76371570-76371570|A/-|frameshift_variant	31.634271133179894	0.507608568980346	6				NaN	NaN	0	NaN	9935	3632	13562
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13587	35.239	NaN	58963	30	0	6826.8	0.214	+			28289	NEASVLHNL	9	96	498.75853519266457	995.5025174521292	2	498.7589416503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NEASVLHNL_	ENSG00000078814|ENST00000262873|MYH7B;ENSG00000100345|ENST00000216181|MYH9;ENSG00000105357|ENST00000642316|MYH14;ENSG00000133026|ENST00000360416|MYH10;ENSG00000133392|ENST00000300036|MYH11;MYH10|p.A411Pfs*11|1|0.15|ENSG00000133026|chr17:8546562-8546562|T/-|frameshift_variant;MYH14|p.G549Wfs*8|1|0.23|ENSG00000105357|chr19:50250519-50250520|-/C|frameshift_variant;MYH14|p.L1950Sfs*14|1|0.34|ENSG00000105357|chr19:50309646-50309646|C/-|frameshift_variant;MYH14|p.M997*|1|0.19|ENSG00000105357|chr19:50271483-50271483|A/-|frameshift_variant;MYH14|p.P548Lfs*25|2|0.32|ENSG00000105357|chr19:50250520-50250520|C/-|frameshift_variant;MYH14|p.R929Gfs*44|1|0.38|ENSG00000105357|chr19:50268237-50268237|G/-|frameshift_variant;MYH9|p.C91Y|1|0.25|ENSG00000100345|chr22:36348965-36348965|C/T|missense_variant;MYH9|p.I784*|1|0.07|ENSG00000100345|chr22:36304036-36304036|G/-|frameshift_variant;nc|ENSG00000078814|A7E2Y1-2|MYH7B;nc|ENSG00000078814|A7E2Y1|MYH7B;nc|ENSG00000105357|Q7Z406-4|MYH14;nc|ENSG00000105357|Q7Z406-5|MYH14;nc|ENSG00000105357|Q7Z406-6|MYH14;nc|ENSG00000105357|Q7Z406|MYH14;nc|ENSG00000133026|P35580-2|MYH10;nc|ENSG00000133026|P35580-3|MYH10;nc|ENSG00000133026|P35580-5|MYH10;nc|ENSG00000133026|P35580|MYH10;nc|ENSG00000133392|P35749-2|MYH11;nc|ENSG00000133392|P35749-3|MYH11;nc|ENSG00000133392|P35749-4|MYH11	172.24860141594272	0.002383092361811508	6				NaN	NaN	0	NaN	9950	3635	13586
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13588	35.242	NaN	14191	30	0	3337.7	0.106	+			464	AAVPKSLQL	9	79	463.7866779160229	NaN	0	463.7867431640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAVPKSLQL_	AP1G2|p.L755Cfs*3|1|0.18|ENSG00000213983|chr14:23559844-23559844|G/-|frameshift_variant;ENSG00000213983|ENST00000397120|AP1G2;ENST00000460049.6_1_14:24028960-24033376:-|nuORF;ENST00000535852.6_1_14:24028960-24035624:-|nuORF;ENST00000557391.1_1_14:24028960-24029655:-|nuORF	74.25504064058377	0.09106938647426577	6				NaN	NaN	0	NaN	9951	3635	13586
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13589	35.244	NaN	9123.8	30	0	1118.4	0.106	+			45763	VAFLLAQAT	9	75	467.27283164140795	932.5311103496159	2	467.2734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VAFLLAQAT_	ENSG00000149635|ENST00000279028|OCSTAMP	45.9519527083369	0.35044536499095585	6				NaN	NaN	0	NaN	9952	3635	13586
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13590	35.246	NaN	10017	30	0	1933.7	0.106				-1	 	0	84	514.2995818894946	1026.584610845789	2	514.3003540039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9953	3635	13586
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13591	35.248	NaN	8525.6	30	0	5346.2	0.106	+			35359	SAPLGKMSL	9	63	452.25144220220227	902.4883314712046	2	452.2518005371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SAPLGKMSL_	ENSG00000122203|ENST00000298569|KIAA1191;ENST00000506668.5_1_5:175780428-175786529:-|nuORF;KIAA1191|p.K274Qfs*18|1|0.61|ENSG00000122203|chr5:176347698-176347699|-/G|frameshift_variant	59.93077597824379	0.21419174904018318	6				NaN	NaN	0	NaN	9954	3635	13586
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13592	35.25	NaN	7707	30	0	580.35	0.035	+			42095	SYIGPIQNI	9	83	502.7735645214111	1003.5325761096223	2	502.7753601074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SYIGPIQNI_	ENSG00000284526|ENST00000640006|unknown	69.6276240434122	0.14239879520340665	6				NaN	NaN	0	NaN	9955	3635	13586
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13593	35.25	NaN	11146	30	0	1939.6	0.138				-1	 	0	69	455.7888586472587	909.5631643613174	2	455.78936767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9956	3635	13586
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13611	35.29	NaN	51673	30	0	4542.3	0.214	+			45949	VASHPRRR	8	106	510.79470728996165	1019.5748616467233	2	510.79541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))VASHPRRR_	ENST00000403045.6_1_2:70995120-70995228:-|nuORF	55.50420428727701	0.5462892107279674	6				NaN	NaN	0	NaN	9971	3638	13610
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13612	35.293	NaN	32265	30	0	3494.4	0.106	+			2520	APVGGHILSY	10	95	507.2730347476876	1012.5315165621752	2	507.2740478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_APVGGHILSY_	ENSG00000197879|ENST00000648651|MYO1C;nc|ENSG00000197879|O00159-2|MYO1C;nc|ENSG00000197879|O00159-3|MYO1C	120.62098272573253	0.026452688167300595	6				NaN	NaN	0	NaN	9972	3638	13610
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13613	35.295	NaN	13164	30	0	1064	0.106	+			716	AEASMISKL	9	86	475.25343489697855	948.4923168607571	2	475.25439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEASMISKL_	ENSG00000055130|ENST00000325222|CUL1	112.10723106719422	0.02684780151337622	6				NaN	NaN	0	NaN	9973	3638	13610
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13614	35.297	NaN	22748	30	0	1861.8	0.106			+	9728	EMVLLELI	8	92	480.27803644560885	958.5415199580177	2	480.2791442871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EMVLLELI_	REV__ENSG00000103343|ENST00000268655|ZNF174;REV__nc|ENSG00000103343|Q15697-2|ZNF174;REV__ZNF174|p.R212Efs*2|1|0.17|ENSG00000103343|chr16:3408324-3408324|C/-|frameshift_variant	76.84663266511073	0.3498490246073164	6				NaN	NaN	0	NaN	9974	3638	13610
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13615	35.299	NaN	19100	30	0	1823.8	0.106	+			13727	GQALYIIAK	9	98	488.7938256640251	975.5730983948503	2	488.79449462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GQALYIIAK_	ENSG00000102893|ENST00000323584|PHKB;ENST00000566436.1_1_16:47628094-47631731:+|nuORF;nc|ENSG00000102893|Q93100-2|PHKB;nc|ENSG00000102893|Q93100-3|PHKB;nc|ENSG00000102893|Q93100-4|PHKB;PHKB|p.G644Efs*2|1|0.12|ENSG00000102893|chr16:47650874-47650874|A/-|frameshift_variant	79.71258880314673	0.09879134589249085	6				NaN	NaN	0	NaN	9975	3638	13610
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13616	35.301	NaN	9877.2	30	0	2341.9	0.032	+			46755	VGSPAEEI	8	68	401.2045439514473	800.3945349696946	2	401.2042236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VGSPAEEI_	ENSG00000168781|ENST00000420765|PPIP5K1;nc|ENSG00000168781|Q6PFW1-2|PPIP5K1;nc|ENSG00000168781|Q6PFW1-3|PPIP5K1;nc|ENSG00000168781|Q6PFW1-4|PPIP5K1;nc|ENSG00000168781|Q6PFW1-5|PPIP5K1;nc|ENSG00000168781|Q6PFW1-7|PPIP5K1;nc|ENSG00000168781|Q6PFW1|PPIP5K1	42.47446043378293	0.6409579893742323	6				NaN	NaN	0	NaN	9976	3638	13610
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13617	35.301	NaN	5208.9	30	0	696.43	0.138	+			835	AEGFVRAL	8	63	431.742054829618	861.469556726036	2	431.7423095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AEGFVRAL_	ENSG00000177606|ENST00000371222|JUN;JUN|p.R257Kfs*53|1|0.31|ENSG00000177606|chr1:58782301-58782302|-/T|frameshift_variant	76.7741389293348	0.3504530765139327	6				NaN	NaN	0	NaN	9977	3638	13610
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13635	35.341	NaN	67512	30	0	16991	0.214	+			1069	AEKVEIATL	9	88	487.28117268547805	972.5477924377561	2	487.28155517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEKVEIATL_	ENSG00000041357|ENST00000044462|PSMA4;nc|ENSG00000041357|P25789-2|PSMA4	143.37361013837676	0.008897369944672323	6				NaN	NaN	0	NaN	9992	3641	13634
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13636	35.344	NaN	37694	30	0	4566.3	0.106	+			10996	FEGKTLVSV	9	84	490.27531460620196	978.5360762792039	2	490.27606201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FEGKTLVSV_	ENSG00000080824|ENST00000216281|HSP90AA1;ENST00000378770.1_1_4:190394307-190396341:+|nuORF;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000205100|Q58FG1|HSP90AA4P	74.1650062923329	0.12277912660386392	6				NaN	NaN	0	NaN	9993	3641	13634
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13637	35.346	NaN	62039	30	0	10745	0.106			+	42591	TASVLIVKQ	9	88	479.79963991524414	957.5847268972883	2	479.79986572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TASVLIVKQ_	REV__ENSG00000186886|ENST00000641440|OR5D3P	108.08749611321984	0.03094949498378333	6				NaN	NaN	0	NaN	9994	3641	13634
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13638	35.348	NaN	20312	30	0	5768.9	0.106				-1	 	0	86	564.3363193490022	1126.6580857648044	2	564.3374633789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9995	3641	13634
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13639	35.35	NaN	16531	30	0	1393.3	0.106	+			9152	EGNELTKTLIK	11	88	623.3558365932078	1244.6971202532154	2	623.356201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EGNELTKTLIK_	ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC;PRKDC|p.D2437Wfs*3|1|0.11|ENSG00000253729|chr8:47840161-47840162|-/CA|frameshift_variant;PRKDC|p.K3681Nfs*6|1|0.32|ENSG00000253729|chr8:47785174-47785177|TTCT/-|frameshift_variant;PRKDC|p.M3670*|1|0.5|ENSG00000253729|chr8:47785212-47785212|T/-|frameshift_variant;PRKDC|p.M3846Cfs*12|1|0.13|ENSG00000253729|chr8:47779047-47779047|T/-|frameshift_variant;PRKDC|p.M4020Cfs*2|1|0.31|ENSG00000253729|chr8:47776968-47776968|T/-|frameshift_variant;PRKDC|p.N3605Kfs*3|1|0.22|ENSG00000253729|chr8:47788993-47788994|-/T|frameshift_variant;PRKDC|p.N4037Ifs*15|1|0.17|ENSG00000253729|chr8:47776916-47776916|T/-|frameshift_variant;PRKDC|p.R2704Gfs*13|2|0.34|ENSG00000253729|chr8:47834238-47834238|T/-|frameshift_variant;PRKDC|p.S3402Ifs*16|1|0.04|ENSG00000253729|chr8:47799302-47799303|-/AAACCGTGAGTTAGAGGAGGTAA|frameshift_variant;PRKDC|p.S4099Qfs*6|1|0.25|ENSG00000253729|chr8:47774265-47774265|A/-|frameshift_variant;PRKDC|p.T3268Pfs*7|1|0.5|ENSG00000253729|chr8:47803426-47803426|T/-|frameshift_variant;PRKDC|p.W3401Cfs*4|1|0.01|ENSG00000253729|chr8:47799304-47799305|-/AATGAATA|frameshift_variant	96.66504779109242	0.07148984068916604	6				NaN	NaN	0	NaN	9996	3641	13634
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13640	35.352	NaN	21082	30	0	2026.1	0.036	+			26784	LVRRNLCLC	9	94	545.3053730771633	1088.5961932211264	2	545.3065795898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LVRRNLCLC_	ENST00000331285.7_1_17:79867048-79869048:-|nuORF;ENST00000572473.1_1_17:79867048-79869264:-|nuORF	42.47446043378293	0.39123495718708534	6				NaN	NaN	0	NaN	9997	3641	13634
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13641	35.352	NaN	9623.2	30	0	1407.9	0.141	+			28166	NAMNMQETY	9	77	551.2196644136693	1100.4247758941385	2	551.2208251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NAMNMQETY_	ENSG00000114520|ENST00000251775|SNX4;ENST00000473417.5_1_3:125188296-125239016:-|nuORF	112.41091882917199	0.026537921851008135	6				NaN	NaN	0	NaN	9998	3641	13634
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13659	35.392	NaN	60784	30	0	10901	0.215			+	23959	LDSSGQIVY	9	94	491.247666334215	NaN	0	491.24749755859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LDSSGQIVY_	REV__ENSG00000165124|ENST00000374469|SVEP1;REV__nc|ENSG00000165124|Q4LDE5-3|SVEP1;REV__SVEP1|p.Y3375Mfs*48|1|0.3|ENSG00000165124|chr9:110386012-110386012|A/-|frameshift_variant	82.30502934623384	0.06348534290027165	6				NaN	NaN	0	NaN	10013	3644	13658
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13660	35.395	NaN	13286	30	0	1671.6	0.106	+			9333	EIIPSTSL	8	67	430.24223293199304	858.4699129307861	2	430.242431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EIIPSTSL_	ENSG00000101204|ENST00000370263|CHRNA4;ENSG00000120903|ENST00000407991|CHRNA2;nc|ENSG00000101204|P43681-2|CHRNA4;nc|ENSG00000120903|Q15822-2|CHRNA2	57.81127852772723	0.5234495074909924	6				NaN	NaN	0	NaN	10014	3644	13658
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13661	35.397	NaN	7635.6	30	0	862.17	0.106	+			50621	YEAELRTTL	9	75	548.2872920215618	1094.5600311099236	2	548.2880249023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YEAELRTTL_	ENSG00000232629|ENST00000437316|HLA-DQB2;nc|ENSG00000232629|P05538-2|HLA-DQB2;nc|ENSG00000232629|P05538|HLA-DQB2	79.48907831485694	0.09975780661107167	6				NaN	NaN	0	NaN	10015	3644	13658
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13662	35.399	NaN	15514	30	0	3493.7	0.106	+			5555	AVALPVAVGR	10	76	476.79981020913374	951.5850674850675	2	476.800048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVALPVAVGR_	ENSG00000275395|ENST00000616721|FCGBP;nc|ENSG00000275395|Q9Y6R7|FCGBP	90.77665401227738	0.12662738171778068	6				NaN	NaN	0	NaN	10016	3644	13658
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13663	35.401	NaN	10017	30	0	2885.3	0.106	+			29159	NVIHNLATY	9	69	522.7767801662721	1043.5390073993442	2	522.77685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NVIHNLATY_	ENSG00000123353|ENST00000243045|ORMDL2	93.19546047674547	0.05585629608842056	6				NaN	NaN	0	NaN	10017	3644	13658
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13664	35.403	NaN	6302.3	30	0	798.51	0.036	+			17252	HWMLEAQF	8	82	531.2475861830851	1060.4806194329701	2	531.248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HWMLEAQF_	PPP1R21|p.L588F|1|0.09|ENSG00000162869|chr2:48498564-48498564|A/C|missense_variant	40.5726180659479	0.6527593143185008	6				NaN	NaN	0	NaN	10018	3644	13658
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13665	35.403	NaN	3228	30	0	452.69	0.143	+			2914	ASCEEAVTLLK	11	70	610.8122308828883	1219.6099088325766	2	610.8132934570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_ASC(Carbamidomethyl (C))EEAVTLLK_	ENST00000494295.1_1_X:134477218-134477365:-|nuORF	102.0615471778698	0.05642515548841253	6				NaN	NaN	0	NaN	10019	3644	13658
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13683	35.443	NaN	44618	30	0	6453.5	0.214	+			41565	SVQETVLPIK	10	74	557.3288051877843	1112.6430574423684	2	557.3299560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVQETVLPIK_	ENSG00000169057|ENST00000453960|MECP2;MECP2|p.E432Afs*3|1|0.03|ENSG00000169057|chrX:154030534-154030535|CC/-|frameshift_variant;MECP2|p.K449Sfs*33|1|0.2|ENSG00000169057|chrX:154030482-154030482|T/-|frameshift_variant;nc|ENSG00000169057|P51608|MECP2	139.38205640894643	0.010918844784185366	6				NaN	NaN	0	NaN	10034	3647	13682
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13684	35.446	NaN	14260	30	0	3502.8	0.106	+			23720	LAVEGGQSL	9	64	437.2370338471318	872.4595147610636	2	437.2372741699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LAVEGGQSL_	ENSG00000104691|ENST00000265616|UBXN8;nc|ENSG00000104691|O00124-2|UBXN8;nc|ENSG00000104691|O00124-3|UBXN8;nc|ENSG00000104691|O00124|UBXN8	145.15565482312357	0.00806134135205793	6				NaN	NaN	0	NaN	10035	3647	13682
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13685	35.448	NaN	18622	30	0	3749.2	0.106	+			48341	VTGGIFSVTK	10	85	504.7893189363538	1007.5640849395077	2	504.78997802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTGGIFSVTK_	ENSG00000151135|ENST00000280756|TMEM263	114.85826248499774	0.03459167991829056	6				NaN	NaN	0	NaN	10036	3647	13682
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13686	35.45	NaN	7313.3	30	0	1940.5	0.106	+			30502	QAFGEKITM	9	87	512.759428869564	1023.504304805928	2	512.7603759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QAFGEKITM_	ENSG00000137575|ENST00000260130|SDCBP;ENST00000424643.3_1_8:70855645-70855750:+|nuORF;ENST00000519115.5_1_8:59477592-59490768:+|nuORF;ENST00000523441.1_1_8:59490633-59492419:+|nuORF;nc|ENSG00000137575|O00560-2|SDCBP;nc|ENSG00000137575|O00560-3|SDCBP	65.46538089061403	0.16805504838372562	6				NaN	NaN	0	NaN	10037	3647	13682
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13687	35.452	NaN	8612.3	30	0	3060.8	0.106				-1	NMLDAADGGL	10	76	496.72058955493515	991.4266261766703	2	496.7212829589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_NM(Oxidation (M))LDAADGGL_	DNAH5|p.F4486Lfs*7|2|0.23|ENSG00000039139|chr5:13701317-13701317|A/-|frameshift_variant;DNAH5|p.G1976Efs*78|3|0.44|ENSG00000039139|chr5:13830731-13830731|C/-|frameshift_variant;DNAH5|p.I1855Sfs*16|1|0.33|ENSG00000039139|chr5:13841052-13841052|T/-|frameshift_variant;DNAH5|p.I2945Rfs*76|1|0.07|ENSG00000039139|chr5:13780948-13780949|-/CATTTCTCTT|frameshift_variant;DNAH5|p.I4068*|1|0.07|ENSG00000039139|chr5:13721077-13721077|T/-|frameshift_variant;DNAH5|p.L1467Wfs*3|1|0.23|ENSG00000039139|chr5:13864593-13864593|A/-|frameshift_variant;DNAH5|p.P3316Lfs*22|3|0.33|ENSG00000039139|chr5:13766130-13766130|G/-|frameshift_variant;DNAH5|p.R293Dfs*12|1|0.33|ENSG00000039139|chr5:13919274-13919274|T/-|frameshift_variant;ENSG00000039139|ENST00000265104|DNAH5;ENST00000508040.1_1_5:13919453-13932161:-|nuORF	58.22992032128504	0.38193887838457763	6				NaN	NaN	0	NaN	10038	3647	13682
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13688	35.454	NaN	11498	30	0	1682.6	0.036	+			25352	LPESTHVEF	9	80	529.7613830794548	1057.5082132257096	2	529.76220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LPESTHVEF_	ENSG00000166750|ENST00000299977|SLFN5;nc|ENSG00000166750|Q08AF3-2|SLFN5;SLFN5|p.P698Lfs*21|1|0.46|ENSG00000166750|chr17:35265300-35265300|C/-|frameshift_variant;SLFN5|p.Q524Sfs*11|1|0.73|ENSG00000166750|chr17:35264609-35264609|C/-|frameshift_variant	76.7741389293348	0.11149722112137898	6				NaN	NaN	0	NaN	10039	3647	13682
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13689	35.454	NaN	24461	30	0	9629	0.144				-1	 	0	73	360.22491828992383	1077.6529254699715	3	360.2253723144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10040	3647	13682
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13707	35.494	NaN	26330	30	0	7918	0.214				-1	 	0	87	490.79733983786355	979.5801267425271	2	490.7976379394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10055	3650	13706
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13708	35.498	NaN	14178	30	0	1922.9	0.106	+			6390	AVVELVTVK	9	80	479.30216479347104	NaN	0	479.30224609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVVELVTVK_	ENSG00000182220|ENST00000636580|ATP6AP2;nc|ENSG00000182220|O75787-2|ATP6AP2	88.17693792209575	0.04527150213038833	6				NaN	NaN	0	NaN	10056	3650	13706
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13709	35.5	NaN	23047	30	0	2425.9	0.106	+			8240	EAFKAIGTAY	10	79	535.7785379751645	1069.5425230171288	2	535.7797241210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EAFKAIGTAY_	ENSG00000148719|ENST00000444643|DNAJB12;nc|ENSG00000148719|Q9NXW2-2|DNAJB12	176.44474024533739	0.0016364113498652615	6				NaN	NaN	0	NaN	10057	3650	13706
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13710	35.501	NaN	6886	30	0	4509.6	0.106				-1	 	0	45	357.2141225824192	712.4136922316384	2	357.2143859863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10058	3650	13706
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13711	35.503	NaN	8242.1	30	0	1348.6	0.106			+	22978	KVRKSRQP	8	63	499.8150838347188	997.6156147362376	2	499.81561279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KVRKSRQP_	REV__ENSG00000064393|ENST00000406875|HIPK2;REV__nc|ENSG00000064393|Q9H2X6-3|HIPK2	63.30626980617807	0.4690498839812213	6				NaN	NaN	0	NaN	10059	3650	13706
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13712	35.505	NaN	8401.3	30	0	1549.7	0.034				-1	 	0	63	470.7942508376956	939.5739487421912	2	470.7945556640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10060	3650	13706
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13713	35.506	NaN	6684.4	30	0	1172.2	0.14				-1	PSPSPRCRS	9	77	522.2552284497535	1042.495903966307	2	522.7535400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_PSPSPRC(Carbamidomethyl (C))RS_	ENST00000479202.5_1_21:46306285-46309037:-|nuORF	32.81241826257853	0.4965981579233955	6				NaN	NaN	0	NaN	10061	3650	13706
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13731	35.545	NaN	58882	30	0	41012	0.214				-1	 	0	66	379.20924544127894	756.4039379493579	2	379.2094421386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10076	3653	13730
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13732	35.549	NaN	21692	30	0	1906.9	0.106				-1	 	0	89	504.2606580760555	1006.506763218911	2	504.26116943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10077	3653	13730
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13733	35.551	NaN	31887	30	0	4536.7	0.106	+			4030	ATDAVGIVLK	10	87	493.79648943947143	985.5784259457429	2	493.79718017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATDAVGIVLK_	ENSG00000132676|ENST00000368336|DAP3;ENST00000462978.1_1_1:155697409-155701908:+|nuORF;nc|ENSG00000132676|P51398-2|DAP3;nc|ENSG00000132676|P51398-3|DAP3	159.27591364854348	0.006848530601684873	6				NaN	NaN	0	NaN	10078	3653	13730
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13734	35.552	NaN	20252	30	0	2048.8	0.106	+			11515	FPDKPITQY	9	90	554.7868621778697	1107.5591714225393	2	554.7872924804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FPDKPITQY_	ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656-2|DDOST;nc|ENSG00000244038|P39656-3|DDOST;nc|ENSG00000244038|P39656|DDOST	93.5975768576971	0.05472259948179787	6				NaN	NaN	0	NaN	10079	3653	13730
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13735	35.554	NaN	14210	30	0	2078.6	0.106	+			554	ADFETVRM	8	79	484.72819212980403	967.4418313264081	2	484.7286682128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ADFETVRM_	ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2	118.74307786436346	0.2363524257139583	6				NaN	NaN	0	NaN	10080	3653	13730
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13736	35.556	NaN	21732	30	0	2123.5	0.035	+			1385	AEVKGVYQF	9	78	520.7735658052912	1039.5325786773824	2	520.774169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEVKGVYQF_	ENSG00000166557|ENST00000299705|TMED3;nc|ENSG00000166557|Q9Y3Q3-2|TMED3	112.41091882917199	0.026537921851008135	6				NaN	NaN	0	NaN	10081	3653	13730
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13737	35.557	NaN	6480.9	30	0	512.79	0.139				-1	 	0	68	432.2521518421693	862.4897507511387	2	432.2527160644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10082	3653	13730
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13755	35.596	NaN	19812	30	0	2520.7	0.214	+			17519	IDKYTEVL	8	83	490.7687316189768	979.5229103047536	2	490.7685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IDKYTEVL_	ENSG00000142541|ENST00000391857|RPL13A;ENST00000425147.1_1_21:26734448-26734742:+|nuORF	90.36981228632155	0.27635063874291205	6				NaN	NaN	0	NaN	10097	3656	13754
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13756	35.6	NaN	16205	30	0	5579.8	0.106			+	24804	LILTAKPAPS	10	78	505.8152625599822	1009.6159721867645	2	505.81573486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LILTAKPAPS_	REV__ENSG00000137310|ENST00000376257|TCF19;REV__TCF19|p.T213Pfs*45|1|0.38|ENSG00000137310|chr6:31161841-31161841|G/-|frameshift_variant	75.04331003522576	0.23611669241777622	6				NaN	NaN	0	NaN	10098	3656	13754
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13757	35.602	NaN	7684.3	30	0	1384.8	0.106	+			42637	TAVGHALVL	9	58	440.76565937336943	879.5167658135389	2	440.76593017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TAVGHALVL_	COL6A3|p.A2956Lfs*45|1|0.33|ENSG00000163359|chr2:237336234-237336234|C/-|frameshift_variant;COL6A3|p.A2957Lfs*44|1|0.33|ENSG00000163359|chr2:237336232-237336232|A/-|frameshift_variant;COL6A3|p.G3016Vfs*19|1|0.34|ENSG00000163359|chr2:237334810-237334810|G/-|frameshift_variant;ENSG00000163359|ENST00000295550|COL6A3;ENST00000491769.1_1_2:238233419-238250825:-|nuORF;nc|ENSG00000163359|P12111-2|COL6A3;nc|ENSG00000163359|P12111-4|COL6A3	71.37791200682192	0.13483053934309522	6				NaN	NaN	0	NaN	10099	3656	13754
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13758	35.603	NaN	9489.9	30	0	1001.4	0.106	+			1012	AEKLEALSV	9	82	480.27333692368035	958.5321209141607	2	480.2738342285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEKLEALSV_	ENSG00000099901|ENST00000430524|RANBP1;ENST00000435265.5_1_22:20114425-20114572:+|nuORF;ENST00000448394.2_1_22:20110177-20114572:+|nuORF;nc|ENSG00000099901|P43487-2|RANBP1;nc|ENSG00000099901|P43487|RANBP1	78.26377905018397	0.10505600812668463	6				NaN	NaN	0	NaN	10100	3656	13754
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13759	35.605	NaN	6410.3	30	0	1044	0.106	+			18716	ITFFSSSSAK	10	73	537.776791769337	1073.539030605474	2	537.77734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ITFFSSSSAK_	ENST00000439559.2_1_10:89102840-89103146:+|nuORF;ENST00000605920.1_1_10:81586793-81587114:+|nuORF;ENST00000609350.1_1_2:128644229-128644535:+|nuORF	58.2462437865262	0.38179041844353556	6				NaN	NaN	0	NaN	10101	3656	13754
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13760	35.607	NaN	53194	30	0	9139.1	0.036	+			3845	ATALEYVYK	9	89	529.2811572961594	1056.5477616591188	2	529.2822875976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATALEYVYK_	ENSG00000135441|ENST00000548925|BLOC1S1;ENST00000549147.1_1_12:56113198-56113390:+|nuORF;nc|ENSG00000135441|P78537-2|BLOC1S1	145.15565482312357	0.00806134135205793	6				NaN	NaN	0	NaN	10102	3656	13754
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13761	35.608	NaN	8336.3	30	0	860.73	0.139			+	1294	AESNRRIK	8	81	487.28117268547805	972.5477924377561	2	487.7799987792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AESNRRIK_	REV__ENSG00000100462|ENST00000324366|PRMT5;REV__nc|ENSG00000100462|O14744-2|PRMT5;REV__nc|ENSG00000100462|O14744-4|PRMT5;REV__PRMT5|p.E97D|1|0.59|ENSG00000100462|chr14:22928150-22928150|C/G|missense_variant	53.351449002276354	0.5676011784961348	6				NaN	NaN	0	NaN	10103	3656	13754
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13779	35.647	NaN	24304	30	0	2672.2	0.214	+			14182	GSQFFITTK	9	77	514.7736843677313	1027.5328158022626	2	514.774658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSQFFITTK_	ENSG00000114857|ENST00000232978|NKTR;ENSG00000138398|ENST00000260970|PPIG;nc|ENSG00000138398|Q13427-2|PPIG;NKTR|p.K429Nfs*37|1|0.2|ENSG00000114857|chr3:42636986-42636986|A/-|frameshift_variant;NKTR|p.N670Ifs*43|1|0.14|ENSG00000114857|chr3:42637707-42637707|A/-|frameshift_variant;NKTR|p.R859Kfs*9|1|0.28|ENSG00000114857|chr3:42638271-42638272|-/A|frameshift_variant;NKTR|p.S692Ffs*17|1|0.1|ENSG00000114857|chr3:42637779-42637791|CAAGGAGCAGATC/-|frameshift_variant;PPIG|p.N420Mfs*33|1|0.4|ENSG00000138398|chr2:169636512-169636512|A/-|frameshift_variant	169.6522961985778	0.0028262690464207238	6				NaN	NaN	0	NaN	10118	3659	13778
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13780	35.651	NaN	9506	30	0	1306	0.106	+			34846	RYQDAIRVF	9	71	584.3163250990879	1166.6180972649756	2	584.3178100585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RYQDAIRVF_	EIF3L|p.A337T|1|0.18|ENSG00000100129|chr22:37875943-37875943|G/A|missense_variant;ENSG00000100129|ENST00000652021|EIF3L;ENST00000457262.1_1_10:43062145-43062928:+|nuORF;nc|ENSG00000100129|Q9Y262-2|EIF3L	56.632244143249146	0.24168844994051353	6				NaN	NaN	0	NaN	10119	3659	13778
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13781	35.653	NaN	7538.8	30	0	1285.9	0.106	+			879	AEHGAWAL	8	60	427.71077579264096	853.4069986520819	2	427.7114562988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEHGAWAL_	ENSG00000157613|ENST00000621158|CREB3L1	62.97842346883844	0.4722955155785405	6				NaN	NaN	0	NaN	10120	3659	13778
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13782	35.654	NaN	8340.8	30	0	1088.5	0.106	+			31704	QNPAEGLQTL	10	99	535.7785379751645	1069.5425230171288	2	536.2797241210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QNPAEGLQTL_	ENSG00000055609|ENST00000262189|KMT2C;KMT2C|p.F4496Lfs*21|3|0.28|ENSG00000055609|chr7:152148439-152148439|A/-|frameshift_variant;KMT2C|p.I4868Lfs*37|1|0.28|ENSG00000055609|chr7:152138837-152138837|T/-|frameshift_variant;nc|ENSG00000055609|Q8NEZ4-2|KMT2C;nc|ENSG00000055609|Q8NEZ4-3|KMT2C	37.81151784470057	0.569310847604193	6				NaN	NaN	0	NaN	10121	3659	13778
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13783	35.656	NaN	3216.8	30	0	1408.8	0.106	+			30195	PSPGRYLTPG	10	48	348.85354464274934	1043.538804528448	3	348.85406494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PSPGRYLTPG_	ENST00000594684.1_1_19:58264770-58264854:+|nuORF	20.94693142431847	0.7087701759873708	6				NaN	NaN	0	NaN	10122	3659	13778
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13784	35.658	NaN	6574.4	30	0	908.17	0.036	+			25332	LPDLSGPHSY	10	76	543.266175349552	1084.5177977659039	2	543.267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LPDLSGPHSY_	ENSG00000176915|ENST00000357997|ANKLE2;nc|ENSG00000176915|Q86XL3-3|ANKLE2	90.36981228632155	0.12895663264417576	6				NaN	NaN	0	NaN	10123	3659	13778
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13785	35.659	NaN	6236.6	30	0	1184.7	0.146	+			6626	AYSHLRYVF	9	65	385.86955428958936	1154.586833468968	3	385.8698425292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AYSHLRYVF_	ENSG00000083857|ENST00000441802|FAT1;FAT1|p.G2934Vfs*3|2|0.37|ENSG00000083857|chr4:186617787-186617787|T/-|frameshift_variant;FAT1|p.K1225Nfs*9|1|0.03|ENSG00000083857|chr4:186636885-186636885|G/-|frameshift_variant;FAT1|p.N3847Yfs*7|1|0.03|ENSG00000083857|chr4:186601370-186601371|-/TTATA|frameshift_variant;FAT1|p.P3228Lfs*42|1|0.27|ENSG00000083857|chr4:186611556-186611556|G/-|frameshift_variant;FAT1|p.P4313Lfs*36|1|0.34|ENSG00000083857|chr4:186596602-186596602|G/-|frameshift_variant;FAT1|p.Q2933Hfs*14|1|0.33|ENSG00000083857|chr4:186617787-186617788|-/G|frameshift_variant;FAT1|p.T1364Yfs*8|1|0.23|ENSG00000083857|chr4:186636118-186636119|-/A|frameshift_variant;FAT1|p.V1878Cfs*8|2|0.22|ENSG00000083857|chr4:186620955-186620956|-/G|frameshift_variant	53.351449002276354	0.2690372970092375	6				NaN	NaN	0	NaN	10124	3659	13778
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13803	35.697	NaN	39076	30	0	8360	0.214	+			44578	TTAVQNVLI	9	90	479.781189928705	957.54782692421	2	479.78167724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTAVQNVLI_	ENSG00000187325|ENST00000341864|TAF9B	66.42927471994793	0.16001998865088202	6				NaN	NaN	0	NaN	10139	3662	13802
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13804	35.701	NaN	29647	30	0	4202	0.106	+			38568	SSFGNMIYK	9	88	523.7520437940337	1045.4895346548674	2	523.7525024414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSFGNMIYK_	ENSG00000120137|ENST00000239231|PANK3	80.45461616416974	0.09558281504443908	6				NaN	NaN	0	NaN	10140	3662	13802
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13805	35.703	NaN	8863	30	0	1747.3	0.106			+	28981	NSKSSIALY	9	76	491.7636113901473	981.5126698470946	2	491.7637939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NSKSSIALY_	REV__tr|U7SYW1|U7SYW1_FUSNUATPaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00939PE=3SV=1	47.95952297671804	0.32689736945648856	6				NaN	NaN	0	NaN	10141	3662	13802
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13806	35.704	NaN	34435	30	0	9577.6	0.106	+			51267	YRLQPVTV	8	85	488.2840175953126	974.5534822574252	2	488.2845153808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YRLQPVTV_	ENST00000560292.2_1_15:102277413-102284889:-|nuORF	44.116797842482775	0.6307669463330267	6				NaN	NaN	0	NaN	10142	3662	13802
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13807	35.706	NaN	9433.2	30	0	2257.1	0.106				-1	 	0	78	564.3363193490022	1126.6580857648044	2	564.3377075195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10143	3662	13802
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13808	35.708	NaN	39775	30	0	3921.2	0.036			+	25609	LQLVLVAGEQ	10	96	535.3160058960324	1068.6174588588647	2	535.31640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LQLVLVAGEQ_	REV__ENST00000318560.5_1_9:133710820-133729475:+|nuORF	37.50817390946774	0.5721060100277453	6				NaN	NaN	0	NaN	10144	3662	13802
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13809	35.709	NaN	7870.6	30	0	1275.8	0.14	+			25479	LPSAATLRY	9	68	496.2805115292366	990.5464701252732	2	496.2819519042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LPSAATLRY_	ENSG00000167608|ENST00000619895|TMC4;nc|ENSG00000167608|Q7Z404-1|TMC4;nc|ENSG00000167608|Q7Z404|TMC4;TMC4|p.F240Lfs*221|1|0.42|ENSG00000167608|chr19:54168267-54168268|AA/-|frameshift_variant;TMC4|p.Q383Rfs*6|1|0.37|ENSG00000167608|chr19:54163872-54163872|G/-|frameshift_variant	85.16082228582465	0.07850854922700509	6				NaN	NaN	0	NaN	10145	3662	13802
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13827	35.746	NaN	330830	30	0	39066	0.142	+			28090	NAFEVAEKY	9	93	535.7607272883291	1069.5069016434581	2	535.7616577148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAFEVAEKY_	ENSG00000130402|ENST00000252699|ACTN4;ENST00000588618.5_1_19:39138385-39212431:+|nuORF	112.2953585152457	0.026655838328212944	6				NaN	NaN	0	NaN	10160	3665	13826
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13828	35.749	NaN	44068	30	0	5820.4	0.106	+			42308	TAFDVAEKY	9	92	522.2552284497535	1042.495903966307	2	522.2560424804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAFDVAEKY_	ENSG00000072110|ENST00000394419|ACTN1;ENST00000554508.5_1_14:69367621-69387744:-|nuORF;nc|ENSG00000072110|P12814-2|ACTN1;nc|ENSG00000072110|P12814-4|ACTN1;nc|ENSG00000072110|P12814|ACTN1	101.45984612302182	0.0377122763612125	6				NaN	NaN	0	NaN	10161	3665	13826
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13829	35.751	NaN	69302	30	0	16676	0.106	+			15502	GVAPFTIAR	9	78	466.27111767762733	930.5276824220547	2	466.27130126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GVAPFTIAR_	COL6A3|p.A2956Lfs*45|1|0.33|ENSG00000163359|chr2:237336234-237336234|C/-|frameshift_variant;COL6A3|p.A2957Lfs*44|1|0.33|ENSG00000163359|chr2:237336232-237336232|A/-|frameshift_variant;COL6A3|p.G1770Vfs*12|1|0.05|ENSG00000163359|chr2:237366878-237366879|-/TGGTGTAA|frameshift_variant;COL6A3|p.G2207Efs*35|1|0.22|ENSG00000163359|chr2:237354908-237354908|G/-|frameshift_variant;COL6A3|p.G3016Vfs*19|1|0.34|ENSG00000163359|chr2:237334810-237334810|G/-|frameshift_variant;COL6A3|p.P2319Qfs*12|1|0.06|ENSG00000163359|chr2:237348359-237348359|G/-|frameshift_variant;COL6A3|p.V1771Sfs*8|3|0.08|ENSG00000163359|chr2:237366876-237366876|C/-|frameshift_variant;ENSG00000163359|ENST00000295550|COL6A3;nc|ENSG00000163359|P12111-2|COL6A3;nc|ENSG00000163359|P12111-3|COL6A3;nc|ENSG00000163359|P12111-4|COL6A3;nc|ENSG00000163359|P12111-5|COL6A3	122.1759843771914	0.019882474861609503	6				NaN	NaN	0	NaN	10162	3665	13826
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13830	35.753	NaN	31465	30	0	4262.3	0.106	+			42991	TEKIISAEL	9	96	502.28656346872435	1002.5585740042487	2	502.2868347167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TEKIISAEL_	ENSG00000073614|ENST00000399788|KDM5A;nc|ENSG00000073614|P29375-2|KDM5A	120.30596017624542	0.02101454110788768	6				NaN	NaN	0	NaN	10163	3665	13826
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13831	35.754	NaN	9317.4	30	0	957.09	0.106	+			47229	VMIVTEYME	9	82	573.7564508853267	1145.4983488374532	2	573.7572631835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Oxidation (M)	_VM(Oxidation (M))IVTEYM(Oxidation (M))E_	ENSG00000044524|ENST00000336596|EPHA3;ENSG00000145242|ENST00000613740|EPHA5;EPHA3|p.M847Wfs*10|4|0.2|ENSG00000044524|chr3:89450213-89450213|C/-|frameshift_variant;nc|ENSG00000145242|P54756-2|EPHA5;nc|ENSG00000145242|P54756-3|EPHA5;nc|ENSG00000145242|P54756|EPHA5	57.81127852772723	0.2318599694398087	6				NaN	NaN	0	NaN	10164	3665	13826
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13832	35.756	NaN	8726.7	30	0	2285	0.106				-1	LYVPCAHSPC	10	67	382.84009301441375	1145.4984496434413	3	382.84039306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_LYVPC(Carbamidomethyl (C))AHSPC_	ENSG00000273136|ENST00000620612|NBPF26;nc|ENSG00000286106|A0A096LNW5|NOTCH2NLR	29.170058357718403	0.6416167986984785	6				NaN	NaN	0	NaN	10165	3665	13826
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13833	35.758	NaN	8294.1	30	0	1773.9	0.035	+			17069	HRESHRPP	8	75	508.2609479762167	1014.5073430192334	2	508.2619323730469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HRESHRPP_	ENST00000526169.1_1_11:67376170-67379399:+|nuORF	36.446750945000026	0.6783611724927969	6				NaN	NaN	0	NaN	10166	3665	13826
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13851	35.795	NaN	349140	30	0	104070	0.187	+			20383	KESTLHLVL	9	99	520.3102106393567	1038.6058683455133	2	520.3112182617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KESTLHLVL_	ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000392399.3_1_2:137087013-137087097:-|nuORF;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;UBB|p.D191Tfs*35|2|0.18|ENSG00000170315|chr17:16382471-16382471|C/-|frameshift_variant;UBB|p.D191Tfs*35|2|0.18|ENSG00000170315|chr17:16382471-16382471|C/-|frameshift_variant	143.8867514904718	0.008656634767784652	6				NaN	NaN	0	NaN	10181	3668	13850
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13852	35.798	NaN	11447	30	0	1262.3	0.106	+			45555	TYLEKAVEV	9	94	526.2854939325899	1050.5564349319798	2	526.2874145507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TYLEKAVEV_	ATM|p.G2425Vfs*15|1|0.33|ENSG00000149311|chr11:108329204-108329204|G/-|frameshift_variant;ATM|p.K2413Tfs*11|1|0.06|ENSG00000149311|chr11:108329168-108329169|-/CAACCAATTTAAATTAT|frameshift_variant;ATM|p.K2811Sfs*46|1|0.34|ENSG00000149311|chr11:108345750-108345750|A/-|frameshift_variant;ENSG00000149311|ENST00000675843|ATM;ENST00000524792.5_1_11:108158320-108236232:+|nuORF;ENST00000527389.2_1_11:108198407-108199966:+|nuORF	112.41091882917199	0.026537921851008135	6				NaN	NaN	0	NaN	10182	3668	13850
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13853	35.8	NaN	9633.2	30	0	1613.3	0.106	+			42678	TAYWMPAEK	9	72	548.7594365646876	1095.504320196175	2	548.7612915039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TAYWMPAEK_	ENSG00000121316|ENST00000240617|PLBD1;PLBD1|p.N214Tfs*4|1|0.06|ENSG00000121316|chr12:14536628-14536628|T/-|frameshift_variant;PLBD1|p.Y42H|1|0.35|ENSG00000121316|chr12:14553404-14553404|A/G|missense_variant	54.722347961057174	0.257609425301511	6				NaN	NaN	0	NaN	10183	3668	13850
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13854	35.802	NaN	5250.1	30	0	1073.6	0.106	+			10428	EVIYMIEL	8	74	513.2663796734774	1024.5182064137548	2	513.2672119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_EVIYM(Oxidation (M))IEL_	nc|ENSG00000205955|Q58FG0|HSP90AA5P	71.37791200682192	0.3954169775488141	6				NaN	NaN	0	NaN	10184	3668	13850
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13855	35.803	NaN	9147.6	30	0	989.38	0.106	+			239	AAMKALQAL	9	76	458.76715713980536	915.5197613464107	2	458.767822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AAMKALQAL_	ENSG00000040341|ENST00000524300|STAU2;ENST00000521451.5_1_8:74528012-74659064:-|nuORF;nc|ENSG00000040341|Q9NUL3-2|STAU2;nc|ENSG00000040341|Q9NUL3-3|STAU2;nc|ENSG00000040341|Q9NUL3-7|STAU2;nc|ENSG00000040341|Q9NUL3-8|STAU2;STAU2|p.C491Lfs*31|1|0.39|ENSG00000040341|chr8:73552072-73552073|-/G|frameshift_variant;STAU2|p.K274Nfs*22|1|0.09|ENSG00000040341|chr8:73613813-73613813|T/-|frameshift_variant;STAU2|p.K410Ifs*9|1|0.07|ENSG00000040341|chr8:73552313-73552314|-/A|frameshift_variant;STAU2|p.L259Tfs*15|2|0.48|ENSG00000040341|chr8:73613860-73613861|-/T|frameshift_variant	108.08749611321984	0.03094949498378333	6				NaN	NaN	0	NaN	10185	3668	13850
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13856	35.805	NaN	6710.8	30	0	611.2	0.106	+			34205	RTDNISFMLK	10	76	612.8226657579175	1223.630778582635	2	612.8245849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RTDNISFMLK_	ENSG00000162434|ENST00000342505|JAK1;JAK1|p.K860Nfs*16|3|0.29|ENSG00000162434|chr1:64841314-64841314|T/-|frameshift_variant	150.81021883065287	0.008351675499118036	6				NaN	NaN	0	NaN	10186	3668	13850
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13857	35.807	NaN	4765.3	30	0	1145.9	0.031				-1	 	0	53	352.7075794568674	703.4006059805348	2	352.7082214355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10187	3668	13850
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13875	35.842	NaN	24593	30	0	2697.6	0.214	+			41552	SVQDVIYVR	9	91	539.7976584900139	1077.5807640468277	2	539.7988891601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVQDVIYVR_	ENSG00000099282|ENST00000373290|TSPAN15	125.71293069911285	0.017741295328254008	6				NaN	NaN	0	NaN	10202	3671	13874
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13876	35.846	NaN	18709	30	0	2194.1	0.106	+			34952	SAAKLLTEY	9	77	498.2734296474048	994.5323063616096	2	498.27374267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAAKLLTEY_	ENSG00000189221|ENST00000338702|MAOA;MAOA|p.G405Afs*12|1|0.26|ENSG00000189221|chrX:43741995-43741995|G/-|frameshift_variant	109.43880257439609	0.029570636687953285	6				NaN	NaN	0	NaN	10203	3671	13874
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13877	35.848	NaN	9578.3	30	0	1486.3	0.106				-1	 	0	71	454.76290693315616	907.5112609331123	2	454.7633972167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10204	3671	13874
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13878	35.85	NaN	10659	30	0	1176.8	0.106	+			11043	FEMATRAAL	9	75	505.2597313547293	1008.5049097762586	2	505.2604675292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FEMATRAAL_	ENSG00000067560|ENST00000418115|RHOA	96.0336014099291	0.047854655524928534	6				NaN	NaN	0	NaN	10205	3671	13874
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13879	35.852	NaN	6056.5	30	0	2156.4	0.106			+	13102	GGAGAAPPLVL	11	62	461.77094833803613	NaN	0	461.77105712890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GGAGAAPPLVL_	REV__ENSG00000004399|ENST00000324093|PLXND1;REV__nc|ENSG00000004399|Q9Y4D7-2|PLXND1;REV__PLXND1|p.N675Tfs*5|2|0.17|ENSG00000004399|chr3:129584392-129584392|G/-|frameshift_variant;REV__PLXND1|p.P1734Hfs*40|1|0.26|ENSG00000004399|chr3:129559716-129559716|G/-|frameshift_variant;REV__PLXND1|p.S1268Qfs*34|1|0.3|ENSG00000004399|chr3:129569907-129569908|-/C|frameshift_variant;REV__PLXND1|p.S804Cfs*5|1|0.07|ENSG00000004399|chr3:129575790-129575791|AG/-|frameshift_variant;REV__PLXND1|p.T1897Rfs*17|1|0.06|ENSG00000004399|chr3:129556402-129556402|G/-|frameshift_variant	60.29395666154354	0.2300260495841857	6				NaN	NaN	0	NaN	10206	3671	13874
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13880	35.853	NaN	10898	30	0	8656.6	0.036	+			13702	GPRERRGVL	9	37	347.2091591795907	1038.6056481389721	3	347.209716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GPRERRGVL_	ENST00000569516.5_1_16:923326-923722:-|nuORF	30.503639358989545	0.5181749237905803	6				NaN	NaN	0	NaN	10207	3671	13874
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13881	35.854	NaN	6855.2	30	0	659.49	0.137	+			2473	APLPHAAV	8	66	388.22601917977477	774.4374854263496	2	388.2265319824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_APLPHAAV_	ENSG00000118900|ENST00000262376|UBN1;ENST00000586152.1_1_16:4926958-4927603:+|nuORF	43.626045697637714	0.6338121648150432	6				NaN	NaN	0	NaN	10208	3671	13874
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13899	35.891	NaN	37894	30	0	8257.5	0.214	+			11236	FIIDSSRSV	9	77	512.2763444111639	1022.5381358891278	2	512.2769165039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FIIDSSRSV_	ENSG00000132031|ENST00000407540|MATN3;ENSG00000132561|ENST00000254898|MATN2;MATN3|p.T387Hfs*10|2|0.28|ENSG00000132031|chr2:20000450-20000450|T/-|frameshift_variant;nc|ENSG00000132031|O15232-2|MATN3;nc|ENSG00000132561|O00339-2|MATN2;nc|ENSG00000132561|O00339-3|MATN2	138.06239232086	0.011389075116295402	6				NaN	NaN	0	NaN	10223	3674	13898
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13900	35.895	NaN	27116	30	0	2180.8	0.106			+	32420	QVGVQYWSY	9	86	565.270095726198	1128.5256385191958	2	565.271240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QVGVQYWSY_	REV__nc|ENSG00000138653|Q9H3R1-2|NDST4	71.29570347882199	0.13518600952103718	6				NaN	NaN	0	NaN	10224	3674	13898
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13901	35.897	NaN	29097	30	0	11537	0.106			+	7742	DMMDAISKR	9	85	549.7490616062535	1097.4835702793068	2	549.75048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Oxidation (M)	_DM(Oxidation (M))M(Oxidation (M))DAISKR_	REV__tr|U7T5A6|U7T5A6_FUSNUCadmium-translocatingP-typeATPaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00154PE=3SV=1	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	10225	3674	13898
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13902	35.899	NaN	21268	30	0	2968.5	0.106	+			36243	SEMKLVQM	8	88	483.24219951528664	964.4698460973733	2	483.2429504394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SEMKLVQM_	ENSG00000008838|ENST00000394128|MED24;MED24|p.E720Gfs*14|1|0.41|ENSG00000008838|chr17:40023224-40023225|-/A|frameshift_variant;MED24|p.K704Sfs*8|1|0.18|ENSG00000008838|chr17:40023272-40023272|G/-|frameshift_variant;MED24|p.P805Rfs*53|1|0.29|ENSG00000008838|chr17:40022663-40022663|G/-|frameshift_variant;nc|ENSG00000008838|O75448-2|MED24;THRA-MED24|1|fusion	62.107414245175825	0.4809183816468817	6				NaN	NaN	0	NaN	10226	3674	13898
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13903	35.901	NaN	8243.7	30	0	765.65	0.106	+			11574	FPMTHGNTGF	10	82	554.7473791802845	1107.480205427369	2	554.7477416992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FPMTHGNTGF_	ENSG00000197111|ENST00000546463|PCBP2;ENST00000517662.1_1_8:75515525-75516083:-|nuORF;ENST00000547717.1_1_12:53848575-53861193:+|nuORF;ENST00000547987.2_1_12:53854819-53861193:+|nuORF;nc|ENSG00000197111|Q15366-2|PCBP2;nc|ENSG00000197111|Q15366-4|PCBP2;nc|ENSG00000197111|Q15366-5|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;nc|ENSG00000197111|Q15366-7|PCBP2;nc|ENSG00000197111|Q15366-8|PCBP2;nc|ENSG00000197111|Q15366|PCBP2	47.95952297671804	0.47580206326914537	6				NaN	NaN	0	NaN	10227	3674	13898
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13904	35.902	NaN	7096.3	30	0	462.07	0.035	+			29286	NYIHVGAQL	9	78	507.77142193297044	1013.5282909327409	2	507.77239990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NYIHVGAQL_	ENSG00000176658|ENST00000318217|MYO1D	58.78195531508484	0.22376836668196862	6				NaN	NaN	0	NaN	10228	3674	13898
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13905	35.903	NaN	6457.9	30	0	633.82	0.138				-1	 	0	62	421.75203093353724	841.4895089338745	2	421.75244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10229	3674	13898
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13923	35.942	NaN	23648	30	0	5677.3	0.214				-1	 	0	77	482.26937545633024	962.5241979794605	2	482.2697448730469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10244	3677	13922
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13924	35.945	NaN	15012	30	0	1976.7	0.106	+			45185	TVMNIAEHY	9	83	539.2543855877623	1076.4942182423245	2	539.2555541992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVMNIAEHY_	ENSG00000106263|ENST00000360876|EIF3B;ENST00000475415.5_1_7:2414943-2418434:+|nuORF;nc|ENSG00000106263|P55884-2|EIF3B	95.81516180277367	0.04847050768394289	6				NaN	NaN	0	NaN	10245	3677	13922
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13925	35.947	NaN	13584	30	0	3246.2	0.106	+			14428	GTAQLTLLH	9	71	477.27364762304654	952.5327423128931	2	477.27398681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTAQLTLLH_	ENSG00000254470|ENST00000532090|AP5B1;ENST00000316846.2_11:65545618-65547282:-|nuORF	185.54966270084765	0.0007389233275946833	6				NaN	NaN	0	NaN	10246	3677	13922
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13926	35.949	NaN	13142	30	0	2236.2	0.106	+			25149	LLSLVEKVT	9	75	501.3149633092312	1000.6153736852624	2	501.31536865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LLSLVEKVT_	ENSG00000198626|ENST00000366574|RYR2;nc|ENSG00000198626|Q92736-2|RYR2;RYR2|p.A2213Lfs*22|1|0.28|ENSG00000198626|chr1:237633654-237633654|A/-|frameshift_variant;RYR2|p.D3347Tfs*10|1|0.36|ENSG00000198626|chr1:237708990-237708990|G/-|frameshift_variant;RYR2|p.L2146Gfs*3|1|0.05|ENSG00000198626|chr1:237628075-237628076|-/GGTCT|frameshift_variant;RYR2|p.R2028H|1|0.13|ENSG00000198626|chr1:237625721-237625721|G/A|missense_variant;RYR2|p.S4583Lfs*11|1|0.45|ENSG00000198626|chr1:237792286-237792286|T/-|frameshift_variant	69.6276240434122	0.14239879520340665	6				NaN	NaN	0	NaN	10247	3677	13922
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13927	35.951	NaN	28509	30	0	4323.2	0.106				-1	 	0	80	422.2679738329286	842.5213947326572	2	422.2683410644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10248	3677	13922
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13928	35.953	NaN	7221.4	30	0	780.27	0.106			+	8288	EAIGLAYIV	9	78	474.7730774178259	947.5316019024518	2	474.7733154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EAIGLAYIV_	REV__tr|U7SKT2|U7SKT2_FUSNUDNAligaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=ligAPE=3SV=1	31.954861631926434	0.5046124803899898	6				NaN	NaN	0	NaN	10249	3677	13922
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13929	35.954	NaN	9913.5	30	0	3437.1	0.038	+			3284	ASLPSELIVHI	11	64	393.5637920803231	1177.6695468411692	3	393.5640563964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASLPSELIVHI_	ENSG00000165355|ENST00000298097|FBXO33	26.063383197487333	0.7164075632144343	6				NaN	NaN	0	NaN	10250	3677	13922
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13946	35.99	NaN	19180	30	0	2468.2	0.214				-1	 	0	99	484.28142859299953	966.5483042527991	2	484.2817687988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10264	3680	13945
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13947	35.993	NaN	33133	30	0	10239	0.106				-1	 	0	63	447.25756873209923	892.5005845309985	2	447.2579040527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10265	3680	13945
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13948	35.995	NaN	9854.7	30	0	1151.9	0.106	+			3846	ATALEYVYK	9	86	529.2811572961594	1056.5477616591188	2	529.2820434570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATALEYVYK_	ENSG00000135441|ENST00000548925|BLOC1S1;ENST00000549147.1_1_12:56113198-56113390:+|nuORF;nc|ENSG00000135441|P78537-2|BLOC1S1	82.7504851949679	0.08565546331141553	6				NaN	NaN	0	NaN	10266	3680	13945
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13949	35.997	NaN	2939.3	30	0	419.82	0.106	+			7330	DAVGAPWGDV	10	60	493.7319513972477	985.4493498612954	2	493.7324523925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DAVGAPWGDV_	ENST00000493902.5_1_16:31044585-31047064:+|nuORF	40.77816245573522	0.5419747034533848	6				NaN	NaN	0	NaN	10267	3680	13945
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13950	35.999	NaN	17714	30	0	8222.8	0.106				-1	 	0	72	506.7578551534553	1011.5011573737106	2	506.7584533691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10268	3680	13945
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13951	36.001	NaN	2282.1	30	0	444.62	0.036	+			1551	AGFDSIFKK	9	41	338.1864310436349	1011.5374637311047	3	338.1869201660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AGFDSIFKK_	ENSG00000184634|ENST00000374080|MED12;nc|ENSG00000184634|Q93074-2|MED12;nc|ENSG00000184634|Q93074-3|MED12	30.503639358989545	0.5181749237905803	6				NaN	NaN	0	NaN	10269	3680	13945
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13952	36.001	NaN	3746.4	30	0	815.28	0.141	+			25347	LPEFTKSEY	9	70	557.2759497232217	1112.5373465132434	2	557.2771606445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LPEFTKSEY_	ENSG00000114796|ENST00000242810|KLHL24;nc|ENSG00000114796|Q6TFL4-2|KLHL24	56.43379154798735	0.2433427591689151	6				NaN	NaN	0	NaN	10270	3680	13945
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13970	36.041	NaN	14580	30	0	1989.8	0.214				-1	 	0	81	479.28351158725053	478.27623512065054	1	479.2841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10285	3683	13969
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13971	36.044	NaN	6682.7	30	0	922.03	0.106	+			847	AEGPPRLAI	9	67	462.26938802829665	922.5242231233933	2	462.26898193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEGPPRLAI_	ENSG00000089693|ENST00000203630|MLF2	74.25504064058377	0.12238981753128622	6				NaN	NaN	0	NaN	10286	3683	13969
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13972	36.046	NaN	12477	30	0	1686.4	0.106	+			49723	VYNENLVHM	9	78	559.7675028986439	1117.5204528640877	2	559.7688598632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYNENLVHM_	ENSG00000116752|ENST00000369541|BCAS2;ENST00000425064.1_1_1:100858662-100858893:-|nuORF	145.15565482312357	0.00806134135205793	6				NaN	NaN	0	NaN	10287	3683	13969
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13973	36.048	NaN	10593	30	0	3224.6	0.106	+			32637	QYTQALEKF	9	73	564.2896739844894	1126.5647950357786	2	564.29052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QYTQALEKF_	ASAP2|p.H548Qfs*57|1|0.14|ENSG00000151693|chr2:9374842-9374842|C/-|frameshift_variant;ASAP2|p.L787Afs*16|1|0.31|ENSG00000151693|chr2:9388513-9388514|-/C|frameshift_variant;ENSG00000151693|ENST00000281419|ASAP2;nc|ENSG00000151693|O43150-2|ASAP2	106.68306549817024	0.032382560583716295	6				NaN	NaN	0	NaN	10288	3683	13969
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13974	36.05	NaN	6481.6	30	0	791.9	0.106			+	-1	ADQKCLLGQ	9	69	516.76181307576	1031.5090732183198	2	516.7631225585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_ADQKC(Carbamidomethyl (C))LLGQ_	REV__ENST00000268070.8_1_15:100514484-100533361:-|nuORF	54.776311868738084	0.25715957988447635	6				NaN	NaN	0	NaN	10289	3683	13969
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13975	36.052	NaN	4884.7	30	0	1384	0.035			+	29689	PGSSVSVVSLI	11	76	522.7999126594023	1043.5852723856044	2	522.8007202148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PGSSVSVVSLI_	REV__ENST00000374135.8_1_1:27205919-27206000:-|nuORF	37.81151784470057	0.5878881669006212	6				NaN	NaN	0	NaN	10290	3683	13969
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13976	36.052	NaN	6037.6	30	0	502.29	0.14	+			3847	ATALEYVYK	9	75	529.2811572961594	1056.5477616591188	2	529.2816772460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATALEYVYK_	ENSG00000135441|ENST00000548925|BLOC1S1;ENST00000549147.1_1_12:56113198-56113390:+|nuORF;nc|ENSG00000135441|P78537-2|BLOC1S1	90.60085204095205	0.06317133949006545	6				NaN	NaN	0	NaN	10291	3683	13969
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13994	36.092	NaN	15917	30	0	1858.6	0.215	+			28865	NPWDNKAVY	9	84	553.766439036795	1105.5183251403898	2	553.7672729492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NPWDNKAVY_	ENSG00000162298|ENST00000377190|SYVN1;ENST00000449943.5_1_11:64897669-64899838:-|nuORF;ENST00000529207.5_1_11:64898917-64899817:-|nuORF;nc|ENSG00000162298|Q86TM6-2|SYVN1;nc|ENSG00000162298|Q86TM6-3|SYVN1;SYVN1|p.N368Qfs*129|1|0.33|ENSG00000162298|chr11:65130663-65130664|-/G|frameshift_variant;SYVN1|p.N368Tfs*117|1|0.4|ENSG00000162298|chr11:65130664-65130664|G/-|frameshift_variant	112.41091882917199	0.026537921851008135	6				NaN	NaN	0	NaN	10306	3686	13993
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13995	36.095	NaN	16317	30	0	1611.8	0.106	+			51330	YSLVSREL	8	80	483.76664479687565	965.5187366605513	2	483.7660827636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YSLVSREL_	ENSG00000119777|ENST00000238788|TMEM214	124.08010499294276	0.22872207833199332	6				NaN	NaN	0	NaN	10307	3686	13993
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13996	36.097	NaN	15978	30	0	2190.6	0.106	+			1604	AGLPAEVYIQD	11	79	392.5359822474425	1174.5861173425276	3	392.5364990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AGLPAEVYIQD_	ENSG00000196924|ENST00000369850|FLNA;FLNA|p.G2237Efs*109|1|0.28|ENSG00000196924|chrX:154352240-154352240|C/-|frameshift_variant;FLNA|p.Q1716Sfs*23|2|0.38|ENSG00000196924|chrX:154354896-154354896|G/-|frameshift_variant;FLNA|p.R2520Vfs*16|1|0.7|ENSG00000196924|chrX:154349560-154349560|G/-|frameshift_variant;nc|ENSG00000196924|P21333-2|FLNA	42.33807565288922	0.5259510355945483	6				NaN	NaN	0	NaN	10308	3686	13993
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13997	36.099	NaN	11447	30	0	2061.5	0.106	+			2745	ARDTCVILTV	10	75	545.798739151187	NaN	0	545.798583984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ARDTCVILTV_	ENSG00000101452|ENST00000252011|DHX35;nc|ENSG00000101452|Q9H5Z1-2|DHX35	89.02883481214508	0.05754025735153368	6				NaN	NaN	0	NaN	10309	3686	13993
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13998	36.101	NaN	5351.2	30	0	296.57	0.106	+			28091	NAFEVAEKY	9	72	535.7607272883291	1069.5069016434581	2	535.7613525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NAFEVAEKY_	ENSG00000130402|ENST00000252699|ACTN4;ENST00000588618.5_1_19:39138385-39212431:+|nuORF	106.88024417677582	0.032181361622142884	6				NaN	NaN	0	NaN	10310	3686	13993
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13999	36.103	NaN	6953.1	30	0	1093	0.035			+	45161	TVMCRIRL	8	77	496.28119597648976	990.5478390197795	2	496.2943115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TVMCRIRL_	REV__ENST00000265729.6_1_7:87848181-87849322:-|nuORF	51.33545320467046	0.5859736979383976	6				NaN	NaN	0	NaN	10311	3686	13993
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14000	36.103	NaN	3868.6	30	0	352.1	0.138	+			50397	YAAGAKLVL	9	63	453.27576001897836	904.5369671047567	2	453.27587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YAAGAKLVL_	ENSG00000109016|ENST00000395511|DHRS7B	76.84663266511073	0.11118375776443899	6				NaN	NaN	0	NaN	10312	3686	13993
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14018	36.143	NaN	70423	30	0	40555	0.214				-1	 	0	88	422.57097577080435	1264.691097912613	3	422.5713806152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10327	3689	14017
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14019	36.146	NaN	22462	30	0	4442.5	0.106	+			20384	KESTLHLVL	9	76	520.3102106393567	1038.6058683455133	2	520.3111572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KESTLHLVL_	ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000392399.3_1_2:137087013-137087097:-|nuORF;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;UBB|p.D191Tfs*35|2|0.18|ENSG00000170315|chr17:16382471-16382471|C/-|frameshift_variant;UBB|p.D191Tfs*35|2|0.18|ENSG00000170315|chr17:16382471-16382471|C/-|frameshift_variant	107.00750918261382	0.032051501805654005	6				NaN	NaN	0	NaN	10328	3689	14017
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14020	36.148	NaN	35469	30	0	3352.9	0.106			+	11996	FVTKGNASF	9	86	485.75289214895605	969.4912313647121	2	485.75299072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FVTKGNASF_	REV__tr|U7STF7|U7STF7_FUSNUDUF1576domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01332PE=4SV=1	111.64827973302667	0.027316110422332632	6				NaN	NaN	0	NaN	10329	3689	14017
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14021	36.15	NaN	9986.4	30	0	1011	0.106	+			34917	SAAESFMKY	9	82	517.2363306833112	1032.4581084334222	2	517.2364501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SAAESFMKY_	ENSG00000007171|ENST00000313735|NOS2;nc|ENSG00000007171|P35228-2|NOS2;NOS2|p.A650Pfs*53|1|0.21|ENSG00000007171|chr17:27769063-27769063|C/-|frameshift_variant;NOS2|p.Y709*|1|0.33|ENSG00000007171|chr17:27767745-27767745|G/-|frameshift_variant	82.7504851949679	0.08565546331141553	6				NaN	NaN	0	NaN	10330	3689	14017
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14022	36.152	NaN	7681.1	30	0	988.47	0.106	+			40436	STVLSKNRS	9	75	496.28119597648976	990.5478390197795	2	496.28179931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STVLSKNRS_	ENSG00000024048|ENST00000372901|UBR2;nc|ENSG00000024048|Q8IWV8|UBR2;UBR2|p.F1143C|1|0.35|ENSG00000024048|chr6:42659841-42659841|T/G|missense_variant	52.936696900407355	0.27249468807391813	6				NaN	NaN	0	NaN	10331	3689	14017
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14023	36.154	NaN	4258.1	30	0	570.43	0.037				-1	 	0	70	564.3363193490022	1126.6580857648044	2	564.3367919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10332	3689	14017
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14024	36.154	NaN	3750.9	30	0	434.03	0.14	+			41932	SVVPRFIN	8	63	466.27111767762733	930.5276824220547	2	466.2714538574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVVPRFIN_	ENSG00000165181|ENST00000682961|SHOC1;nc|ENSG00000165181|Q5VXU9-3|SHOC1;nc|ENSG00000165181|Q5VXU9|SHOC1	30.503639358989545	0.7238069182250283	6				NaN	NaN	0	NaN	10333	3689	14017
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14042	36.194	NaN	57837	30	0	19523	0.214	+			51013	YIYDGELVSK	10	86	593.8025257942855	1185.590498655371	2	593.80322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YIYDGELVSK_	ENSG00000117620|ENST00000533028|SLC35A3;nc|ENSG00000283761|Q9Y2D2-2|SLC35A3	164.45504665044191	0.00544846538291036	6				NaN	NaN	0	NaN	10348	3692	14041
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14043	36.197	NaN	33869	30	0	3008.9	0.106	+			38115	SPVSKGILQY	10	84	546.3075111779343	1090.6004694226685	2	546.3074340820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SPVSKGILQY_	ENSG00000167325|ENST00000300738|RRM1	89.02883481214508	0.13663399911061233	6				NaN	NaN	0	NaN	10349	3692	14041
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14044	36.199	NaN	7120.8	30	0	553.45	0.106	+			27148	MAVRLIAEG	9	77	480.27040512333184	958.5262573134637	2	480.2705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MAVRLIAEG_	ENST00000484724.5_1_3:125872139-125877285:-|nuORF	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	10350	3692	14041
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14045	36.201	NaN	6107.3	30	0	347.71	0.106			+	12109	GAEFGGKLEF	10	82	527.7647931205095	1053.5150333078188	2	528.7692260742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GAEFGGKLEF_	REV__tr|U7T5Z8|U7T5Z8_FUSNUL-methioninegamma-lyaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00144PE=3SV=1	47.95952297671804	0.47580206326914537	6				NaN	NaN	0	NaN	10351	3692	14041
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14046	36.203	NaN	6647.3	30	0	854.15	0.106	+			41403	SVMRLTISY	9	79	543.2872193943115	1084.5598858554229	2	543.287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_SVM(Oxidation (M))RLTISY_	ENSG00000100644|ENST00000337138|HIF1A;nc|ENSG00000100644|Q16665-2|HIF1A;nc|ENSG00000100644|Q16665-3|HIF1A	82.7504851949679	0.08565546331141553	6				NaN	NaN	0	NaN	10352	3692	14041
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14047	36.205	NaN	3249.3	30	0	254.84	0.036	+			36485	SEVTFALHSA	10	67	531.2662074694839	1060.5178620057677	2	531.2669677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SEVTFALHSA_	ENSG00000127837|ENST00000248450|AAMP;ENST00000461911.1_1_2:219132163-219134845:-|nuORF;ENST00000475678.5_1_2:219131145-219134809:-|nuORF;ENST00000489767.5_1_2:219130391-219134818:-|nuORF	107.00750918261382	0.05688644658934505	6				NaN	NaN	0	NaN	10353	3692	14041
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14048	36.205	NaN	5130.5	30	0	530.98	0.139			+	28616	NKSRDVSF	8	66	476.74777791346696	NaN	0	476.7476501464844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NKSRDVSF_	REV__TLR1|p.L28S|1|0.04|ENSG00000174125|chr4:38798749-38798749|A/G|missense_variant	37.15910966729921	1.7418937515398478	6				NaN	NaN	0	NaN	10354	3692	14041
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14066	36.242	NaN	55955	30	0	14288	0.214	+			45364	TVTAQILLK	9	81	493.8153113836366	985.6160698340732	2	493.8157043457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVTAQILLK_	ENSG00000178982|ENST00000248342|EIF3K;ENST00000514461.1_1_4:116964948-116965134:-|nuORF;ENST00000586932.5_1_19:39109833-39116793:+|nuORF;ENST00000593062.5_1_19:39109833-39121488:+|nuORF;nc|ENSG00000178982|Q9UBQ5-2|EIF3K	133.9934435666947	0.013297982075521412	6				NaN	NaN	0	NaN	10369	3695	14065
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14067	36.246	NaN	32839	30	0	13609	0.106	+			31061	QEYAQVIKM	9	97	555.2861277911215	1108.557702649043	2	555.2872924804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QEYAQVIKM_	ENSG00000173674|ENST00000379607|EIF1AX;ENSG00000198692|ENST00000361365|EIF1AY;ENST00000465253.1_1_Y:22737757-22750047:+|nuORF	115.49404669440601	0.023927554121326553	6				NaN	NaN	0	NaN	10370	3695	14065
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14068	36.248	NaN	15455	30	0	2820.2	0.106	+			39120	SSTMWTTLK	9	83	527.7647931205095	1053.5150333078188	2	527.7658081054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSTMWTTLK_	ENST00000587750.5_1_17:76198611-76202102:+|nuORF;ENST00000589664.5_1_17:76200913-76202102:+|nuORF	93.1432384553994	0.056003526918089595	6				NaN	NaN	0	NaN	10371	3695	14065
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14069	36.25	NaN	13937	30	0	2108.7	0.106	+			42241	TAAPGRFSF	9	84	477.2451806170768	952.4758083009536	2	477.2456970214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TAAPGRFSF_	DCTPP1|p.E15D|1|0.42|ENSG00000179958|chr16:30429936-30429936|C/A|missense_variant;DCTPP1|p.Q82Kfs*25|1|0.35|ENSG00000179958|chr16:30424502-30424502|G/-|frameshift_variant;ENSG00000179958|ENST00000319285|DCTPP1;ENST00000565758.1_1_16:30441199-30441310:-|nuORF	46.45678178249821	0.34452392205506005	6				NaN	NaN	0	NaN	10372	3695	14065
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14070	36.252	NaN	3583.3	30	0	308.04	0.106	+			40487	STYEQVDLIGK	11	70	626.8246278133757	1251.6347026935514	2	626.8248291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STYEQVDLIGK_	ENSG00000165732|ENST00000354185|DDX21;nc|ENSG00000165732|Q9NR30-2|DDX21	106.15719557519877	0.04795798448229554	6				NaN	NaN	0	NaN	10373	3695	14065
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14071	36.253	NaN	22010	30	0	3077.9	0.034	+			27105	MANGAVIHL	9	85	463.24912068384106	924.4836884344821	2	463.2493896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MANGAVIHL_	ENSG00000099995|ENST00000215793|SF3A1;nc|ENSG00000099995|Q15459-2|SF3A1	163.84426431716093	0.003817671866125946	6				NaN	NaN	0	NaN	10374	3695	14065
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14072	36.254	NaN	8644.9	30	0	867.24	0.14	+			1879	AILTQFAMF	9	83	521.275406259305	1040.5362595854099	2	522.2800903320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AILTQFAMF_	tr|U7SUJ0|U7SUJ0_FUSNUABCtransporterATP-bindingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01184PE=4SV=1	44.377184641726394	0.36891676396732553	6				NaN	NaN	0	NaN	10375	3695	14065
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14090	36.291	NaN	99847	30	0	20506	0.163	+			49611	VYGSFASKL	9	96	486.2630038021122	970.5114546710245	2	486.2634582519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYGSFASKL_	ENSG00000155096|ENST00000337198|AZIN1	141.52041321563706	0.009766778904176347	6				NaN	NaN	0	NaN	10390	3698	14089
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14091	36.294	NaN	20219	30	0	3045.6	0.106				-1	 	0	80	511.2868639927408	1020.5591750522816	2	511.28778076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10391	3698	14089
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14092	36.296	NaN	6092.5	30	0	925.12	0.106	+			47709	VSFGESVLK	9	68	483.2686010402587	NaN	0	483.2686462402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSFGESVLK_	ENSG00000105856|ENST00000222574|HBP1;nc|ENSG00000105856|O60381-2|HBP1;nc|ENSG00000105856|O60381-3|HBP1	74.1650062923329	0.09137789763820878	6				NaN	NaN	0	NaN	10392	3698	14089
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14093	36.298	NaN	12578	30	0	1148.1	0.106	+			12399	GEAEFNRIM	9	88	533.7528551744507	1065.4911574157013	2	533.7532348632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEAEFNRIM_	ENSG00000130402|ENST00000252699|ACTN4;ENST00000497637.5_1_19:39218501-39220069:+|nuORF;nc|ENSG00000130402|O43707-2|ACTN4;nc|ENSG00000130402|O43707-3|ACTN4	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	10393	3698	14089
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14094	36.299	NaN	9135.2	30	0	671.54	0.106	+			50564	YAVHEGLGL	9	76	479.7526977950093	957.4908426568186	2	479.753173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YAVHEGLGL_	ENSG00000125630|ENST00000263331|POLR1B;nc|ENSG00000125630|Q9H9Y6-2|POLR1B;nc|ENSG00000125630|Q9H9Y6-3|POLR1B;nc|ENSG00000125630|Q9H9Y6-5|POLR1B;POLR1B|p.F613Lfs*14|1|0.08|ENSG00000125630|chr2:112568055-112568055|T/-|frameshift_variant;POLR1B|p.I264Sfs*26|1|0.05|ENSG00000125630|chr2:112551802-112551803|-/GTAAACTC|frameshift_variant;POLR1B|p.K311Nfs*26|1|0.28|ENSG00000125630|chr2:112551942-112551942|A/-|frameshift_variant	85.35947970620816	0.07794846947388434	6				NaN	NaN	0	NaN	10394	3698	14089
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14095	36.301	NaN	5203.2	30	0	810.18	0.106			+	-1	VLCITEALS	9	76	503.2683209238664	1004.5220889145328	2	503.7747802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_VLC(Carbamidomethyl (C))ITEALS_	REV__ENSG00000084444|ENST00000197268|FAM234B	42.47446043378293	0.39123495718708534	6				NaN	NaN	0	NaN	10395	3698	14089
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14096	36.303	NaN	10594	30	0	5563.5	0.045			+	50107	WGRWWFWLERR	11	70	559.9551391629991	1676.843588089197	3	559.955810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_WGRWWFWLERR_	REV__ENST00000246635.7_1_17:39661629-39661743:-|nuORF	5.698786898958082	0.8438047409760123	6				NaN	NaN	0	NaN	10396	3698	14089
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14114	36.339	NaN	13836	30	0	1776.7	0.214	+			2181	ALMLFGKDF	9	80	521.275406259305	1040.5362595854099	2	521.27587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ALMLFGKDF_	ENSG00000155545|ENST00000381199|MIER3;ENST00000452157.5_1_5:56218957-56234137:-|nuORF;MIER3|p.R343Dfs*15|4|0.22|ENSG00000155545|chr5:56923940-56923940|T/-|frameshift_variant;nc|ENSG00000155545|Q7Z3K6-2|MIER3;nc|ENSG00000155545|Q7Z3K6-3|MIER3;nc|ENSG00000155545|Q7Z3K6-4|MIER3	52.936696900407355	0.27249468807391813	6				NaN	NaN	0	NaN	10411	3701	14113
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14115	36.343	NaN	16144	30	0	4222.5	0.106	+			18979	IVSDFTIGR	9	77	504.27868875218655	1006.5428245711731	2	504.2795104980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IVSDFTIGR_	ENSG00000110713|ENST00000324932|NUP98;nc|ENSG00000110713|P52948-2|NUP98;nc|ENSG00000110713|P52948-3|NUP98;nc|ENSG00000110713|P52948-4|NUP98;nc|ENSG00000110713|P52948-6|NUP98;nc|ENSG00000110713|P52948|NUP98;NUP98|p.N1328Tfs*89|2|0.22|ENSG00000110713|chr11:3699159-3699159|T/-|frameshift_variant	117.81106730687013	0.02252488733980868	6				NaN	NaN	0	NaN	10412	3701	14113
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14116	36.345	NaN	20072	30	0	3641.2	0.106	+			39984	STMLQAIER	9	85	524.7758956767011	1047.5372384202021	2	524.7767333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STMLQAIER_	ENSG00000181789|ENST00000314797|COPG1	104.42354056486148	0.0346881550498418	6				NaN	NaN	0	NaN	10413	3701	14113
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14117	36.347	NaN	13892	30	0	2718.7	0.106			+	7860	DRAKMLVL	8	73	473.28315904732807	944.5517651614562	2	473.28424072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DRAKMLVL_	REV__ENST00000369847.3_2_10:105086334-105104817:-|nuORF	85.35947970620816	0.2915182781752196	6				NaN	NaN	0	NaN	10414	3701	14113
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14118	36.349	NaN	17850	30	0	3403	0.106	+			43368	TGEAMLVIK	9	78	481.2725736566571	960.5305943801142	2	481.2731018066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TGEAMLVIK_	tr|U7T480|U7T480_FUSNUhistidinekinaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00375PE=4SV=1	107.00750918261382	0.032051501805654005	6				NaN	NaN	0	NaN	10415	3701	14113
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14119	36.35	NaN	22349	30	0	9657.9	0.036				-1	 	0	64	355.19003240890197	1062.5482678269059	3	355.1905212402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10416	3701	14113
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14120	36.351	NaN	39279	30	0	7330.1	0.139				-1	 	0	77	457.2418424340261	912.4691319348523	2	457.24224853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10417	3701	14113
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14138	36.389	NaN	108970	30	0	33568	0.157				-1	 	0	72	484.762946176396	967.511339419592	2	484.7632141113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10432	3704	14137
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14139	36.392	NaN	25364	30	0	2870.9	0.106	+			3402	ASQELWLNH	9	83	549.27179123888	1096.52902954456	2	549.2725830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASQELWLNH_	ENSG00000105732|ENST00000359044|ZNF574;nc|ENSG00000105732|Q6ZN55-2|ZNF574	114.8945686534367	0.024290463251177924	6				NaN	NaN	0	NaN	10433	3704	14137
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14140	36.394	NaN	16990	30	0	2363.7	0.106	+			6542	AYGKDFHLI	9	83	532.2819338186871	1062.549314704174	2	532.2823486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AYGKDFHLI_	ENSG00000198160|ENST00000401041|MIER1;nc|ENSG00000198160|Q8N108-13|MIER1;nc|ENSG00000198160|Q8N108-14|MIER1;nc|ENSG00000198160|Q8N108-15|MIER1;nc|ENSG00000198160|Q8N108-16|MIER1;nc|ENSG00000198160|Q8N108-17|MIER1;nc|ENSG00000198160|Q8N108-18|MIER1;nc|ENSG00000198160|Q8N108-19|MIER1;nc|ENSG00000198160|Q8N108|MIER1	54.776311868738084	0.25715957988447635	6				NaN	NaN	0	NaN	10434	3704	14137
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14141	36.396	NaN	16913	30	0	2035.1	0.106	+			35178	SAIGRAMEL	9	81	474.2519041546226	946.4892553760452	2	474.252197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SAIGRAMEL_	ARHGEF12|p.G1290Afs*71|1|0.09|ENSG00000196914|chr11:120480061-120480062|-/CTGCAAGAATTAAATTA|frameshift_variant;ENSG00000196914|ENST00000397843|ARHGEF12;ENST00000529970.5_1_11:120278459-120348246:+|nuORF;nc|ENSG00000196914|Q9NZN5-2|ARHGEF12	54.722347961057174	0.257609425301511	6				NaN	NaN	0	NaN	10435	3704	14137
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14142	36.398	NaN	11966	30	0	2149.8	0.106				-1	 	0	76	488.77613861684125	975.5377243004825	2	488.7763366699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10436	3704	14137
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14143	36.399	NaN	11464	30	0	1056.6	0.106	+			7734	DLTRFFEY	8	84	545.7632036320183	1089.5118543308365	2	545.7640991210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DLTRFFEY_	ENST00000304060.9_1_19:11944623-11944695:+|nuORF	51.33545320467046	0.5859736979383976	6				NaN	NaN	0	NaN	10437	3704	14137
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14144	36.401	NaN	4318.3	30	0	254.27	0.032			+	46673	VGGLHAVF	8	61	400.22648354673316	798.4384141602663	2	400.2264404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VGGLHAVF_	REV__ENSG00000141314|ENST00000269051|RHBDL3;REV__nc|ENSG00000141314|P58872-2|RHBDL3;REV__nc|ENSG00000141314|P58872-3|RHBDL3	33.49298260027079	0.7007254697536482	6				NaN	NaN	0	NaN	10438	3704	14137
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14162	36.438	NaN	4704.5	30	0	600.83	0.214	+			17333	IAIDGGKVL	9	65	443.2732551145482	884.5319572958964	2	443.2737121582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IAIDGGKVL_	ENSG00000132952|ENST00000255304|USPL1;USPL1|p.N138S|1|0.29|ENSG00000132952|chr13:30631019-30631019|A/G|missense_variant	90.36981228632155	0.0638227155548745	6				NaN	NaN	0	NaN	10453	3707	14161
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14163	36.442	NaN	5273.4	30	0	508.07	0.106	+			42356	TAIEAQHLL	9	78	498.27920005055176	NaN	0	498.2793273925781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAIEAQHLL_	ENSG00000104812|ENST00000323798|GYS1;nc|ENSG00000104812|P13807-2|GYS1	77.31757898189308	0.08057531075035683	6				NaN	NaN	0	NaN	10454	3707	14161
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14164	36.444	NaN	7409.2	30	0	1613.6	0.106			+	-1	SLHLLCLIT	9	64	357.2064632145162	1068.5975602437486	3	357.2072448730469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SLHLLC(Carbamidomethyl (C))LIT_	REV__ENSG00000176225|ENST00000640769|RTTN;REV__ENST00000581709.1_1_18:67758841-67776916:-|nuORF;REV__ENST00000583043.5_1_18:67684852-67806940:-|nuORF;REV__nc|ENSG00000176225|Q86VV8-3|RTTN;REV__RTTN|p.Y1487Mfs*4|1|0.38|ENSG00000176225|chr18:70075457-70075457|A/-|frameshift_variant	30.317721548370564	0.5199124245378496	6				NaN	NaN	0	NaN	10455	3707	14161
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14165	36.446	NaN	8161	30	0	1421.9	0.106			+	37162	SIVQPKPTY	9	70	516.7892411203923	1031.5639293075844	2	516.7902221679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SIVQPKPTY_	REV__ENSG00000188283|ENST00000684119|ZNF383	39.252832667884924	0.4290233611298554	6				NaN	NaN	0	NaN	10456	3707	14161
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14166	36.447	NaN	4262	30	0	588.64	0.106				-1	RVNLETMC	8	74	511.7421726908269	1021.4697924484539	2	512.7402954101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_RVNLETMC(Carbamidomethyl (C))_	ENSG00000105186|ENST00000306065|ANKRD27	26.79610172149135	0.7524337208463756	6				NaN	NaN	0	NaN	10457	3707	14161
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14167	36.449	NaN	10888	30	0	840.96	0.036	+			45578	TYNPAFSRL	9	86	534.7766842064609	1067.5388154797217	2	534.778076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TYNPAFSRL_	ENSG00000146433|ENST00000684151|TMEM181;nc|ENSG00000146433|Q9P2C4-1|TMEM181	37.50817390946774	0.44948750990682723	6				NaN	NaN	0	NaN	10458	3707	14161
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14168	36.45	NaN	6242.4	30	0	485.53	0.141				-1	 	0	79	541.273494514306	540.2662180477059	1	541.2750854492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10459	3707	14161
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14186	36.489	NaN	88125	30	0	20332	0.214	+			19085	IYIGGQEHF	9	86	532.2633452027969	1062.5121374723938	2	532.2644653320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IYIGGQEHF_	ENSG00000158125|ENST00000379416|XDH;XDH|p.Q919Rfs*10|1|0.37|ENSG00000158125|chr2:31350104-31350104|C/-|frameshift_variant	95.81516180277367	0.04847050768394289	6				NaN	NaN	0	NaN	10474	3710	14185
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14187	36.493	NaN	22018	30	0	3137.8	0.106	+			46212	VEAGGMQAL	9	77	438.21748723036666	874.4204215275333	2	438.2179870605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VEAGGMQAL_	ENSG00000168036|ENST00000349496|CTNNB1;ENSG00000173801|ENST00000393931|JUP	122.1759843771914	0.019882474861609503	6				NaN	NaN	0	NaN	10475	3710	14185
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14188	36.495	NaN	17189	30	0	2356.6	0.106				-1	 	0	82	496.29416010348046	990.573767273761	2	496.2945556640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10476	3710	14185
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14189	36.497	NaN	10972	30	0	1589.5	0.106	+			657	AEAEKVLAL	9	74	472.2757775960075	942.537002258815	2	472.2762145996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEAEKVLAL_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	72.87924865735499	0.12833875048249987	6				NaN	NaN	0	NaN	10477	3710	14185
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14190	36.498	NaN	7437.2	30	0	1438.8	0.106			+	29876	PLHLQELY	8	76	506.7763252922347	1011.5380976512694	2	506.7769775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PLHLQELY_	REV__ENSG00000163092|ENST00000409195|XIRP2;REV__nc|ENSG00000163092|A4UGR9-2|XIRP2;REV__nc|ENSG00000163092|A4UGR9-3|XIRP2;REV__nc|ENSG00000163092|A4UGR9|XIRP2;REV__XIRP2|p.N2647Ifs*6|2|0.26|ENSG00000163092|chr2:167249851-167249851|A/-|frameshift_variant	37.15910966729921	0.6739408393984688	6				NaN	NaN	0	NaN	10478	3710	14185
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14191	36.5	NaN	7229.5	30	0	1260.5	0.035	+			20385	KESTLHLVL	9	75	520.3102106393567	1038.6058683455133	2	520.3114624023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KESTLHLVL_	ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000392399.3_1_2:137087013-137087097:-|nuORF;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;UBB|p.D191Tfs*35|2|0.18|ENSG00000170315|chr17:16382471-16382471|C/-|frameshift_variant;UBB|p.D191Tfs*35|2|0.18|ENSG00000170315|chr17:16382471-16382471|C/-|frameshift_variant	39.252832667884924	0.4290233611298554	6				NaN	NaN	0	NaN	10479	3710	14185
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14192	36.501	NaN	5038.4	30	0	846.46	0.145	+			25326	LPDFFPRPNT	10	54	401.87685237972073	1202.6087277393622	3	401.8768310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LPDFFPRPNT_	ENSG00000138286|ENST00000242505|FAM149B1;ENST00000468462.1_1_10:74994935-75000774:+|nuORF;ENST00000470798.5_1_10:74987874-74995082:+|nuORF;ENST00000475829.5_1_10:74992725-74995082:+|nuORF;nc|ENSG00000138286|Q96BN6-2|FAM149B1	28.081489160057373	0.6505064946289502	6				NaN	NaN	0	NaN	10480	3710	14185
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14210	36.538	NaN	33308	30	0	6623.5	0.214				-1	 	0	81	505.28118392232574	1008.5478149114515	2	505.28167724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10495	3713	14209
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14211	36.542	NaN	31500	30	0	3797.6	0.106	+			35518	SAVDVHINM	9	84	493.24154227838693	984.4685316235739	2	493.2420654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAVDVHINM_	ENSG00000204463|ENST00000676615|BAG6;nc|ENSG00000204463|P46379-2|BAG6;nc|ENSG00000204463|P46379-4|BAG6;nc|ENSG00000204463|P46379-5|BAG6;nc|ENSG00000204463|P46379|BAG6	93.1432384553994	0.056003526918089595	6				NaN	NaN	0	NaN	10496	3713	14209
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14212	36.544	NaN	17953	30	0	1575.2	0.106	+			51588	YYNKVSTVF	9	78	560.7867057696023	1119.5588586060046	2	560.7875366210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YYNKVSTVF_	ENSG00000107581|ENST00000369144|EIF3A;nc|ENSG00000107581|Q14152-2|EIF3A	124.08010499294276	0.018729767491916592	6				NaN	NaN	0	NaN	10497	3713	14209
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14213	36.546	NaN	7716	30	0	549.03	0.106	+			23237	KYIDQKFVL	9	78	577.3344378298622	1152.6543227265242	2	577.3346557617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KYIDQKFVL_	ENSG00000078304|ENST00000694906|PPP2R5C;ENSG00000112640|ENST00000485511|PPP2R5D;ENSG00000154001|ENST00000337537|PPP2R5E;ENST00000467447.1_1_6:42974755-42975804:+|nuORF;ENST00000495716.1_1_3:52407964-52408519:+|nuORF;nc|ENSG00000078304|Q13362-2|PPP2R5C;nc|ENSG00000078304|Q13362-3|PPP2R5C;nc|ENSG00000078304|Q13362-4|PPP2R5C;nc|ENSG00000078304|Q13362-5|PPP2R5C;nc|ENSG00000078304|Q13362|PPP2R5C;nc|ENSG00000112640|Q14738-2|PPP2R5D;nc|ENSG00000112640|Q14738-3|PPP2R5D;nc|ENSG00000154001|Q16537-2|PPP2R5E;nc|ENSG00000154001|Q16537-3|PPP2R5E;PPP2R5C|p.H504Qfs*14|1|0.07|ENSG00000078304|chr14:101925207-101925208|-/A|frameshift_variant;PPP2R5E|p.K449Nfs*7|1|0.22|ENSG00000154001|chr14:63376066-63376066|T/-|frameshift_variant;PPP2R5E|p.T201Qfs*26|1|0.36|ENSG00000154001|chr14:63396665-63396665|T/-|frameshift_variant	124.08010499294276	0.018729767491916592	6				NaN	NaN	0	NaN	10498	3713	14209
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14214	36.548	NaN	13113	30	0	2324.4	0.106	+			29998	PPGVSGALATY	11	79	516.7710394821445	1031.5275260310889	2	516.7716064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PPGVSGALATY_	ENSG00000065618|ENST00000648076|COL17A1;nc|ENSG00000065618|Q9UMD9-2|COL17A1	45.97224482568171	0.4762245054624163	6				NaN	NaN	0	NaN	10499	3713	14209
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14215	36.549	NaN	5648.3	30	0	319.31	0.036	+			5543	AVALINAAIQK	11	80	556.3444748861008	1110.6743968390015	2	556.345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AVALINAAIQK_	ENSG00000140575|ENST00000268182|IQGAP1;IQGAP1|p.N941Ifs*8|1|0.43|ENSG00000140575|chr15:90476693-90476693|A/-|frameshift_variant;IQGAP1|p.S1529Afs*10|1|0.15|ENSG00000140575|chr15:90492665-90492665|A/-|frameshift_variant	124.08010499294276	0.012337848868221223	6				NaN	NaN	0	NaN	10500	3713	14209
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14216	36.55	NaN	9438.5	30	0	978.26	0.14	+			46439	VERVVVDAL	9	75	500.2940382172533	998.5735235013066	2	500.29486083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VERVVVDAL_	ENSG00000223572|ENST00000413453|CKMT1A;ENSG00000237289|ENST00000441322|CKMT1B;nc|ENSG00000237289|P12532-2|CKMT1A	49.536043120802724	0.308405419312776	6				NaN	NaN	0	NaN	10501	3713	14209
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14234	36.589	NaN	23576	30	0	5544.4	0.214	+			43381	TGFNGKLVY	9	76	499.76883471482694	997.5231164964539	2	499.7686767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TGFNGKLVY_	ENSG00000083857|ENST00000441802|FAT1;FAT1|p.G2934Vfs*3|2|0.37|ENSG00000083857|chr4:186617787-186617787|T/-|frameshift_variant;FAT1|p.K1225Nfs*9|1|0.03|ENSG00000083857|chr4:186636885-186636885|G/-|frameshift_variant;FAT1|p.N3847Yfs*7|1|0.03|ENSG00000083857|chr4:186601370-186601371|-/TTATA|frameshift_variant;FAT1|p.P3228Lfs*42|1|0.27|ENSG00000083857|chr4:186611556-186611556|G/-|frameshift_variant;FAT1|p.P4313Lfs*36|1|0.34|ENSG00000083857|chr4:186596602-186596602|G/-|frameshift_variant;FAT1|p.Q2933Hfs*14|1|0.33|ENSG00000083857|chr4:186617787-186617788|-/G|frameshift_variant;FAT1|p.T1364Yfs*8|1|0.23|ENSG00000083857|chr4:186636118-186636119|-/A|frameshift_variant;FAT1|p.V1878Cfs*8|2|0.22|ENSG00000083857|chr4:186620955-186620956|-/G|frameshift_variant	75.04331003522576	0.118981335847003	6				NaN	NaN	0	NaN	10516	3716	14233
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14235	36.593	NaN	14034	30	0	1605.3	0.106	+			51302	YSDDIPHAL	9	84	515.7449128696963	1029.4752728061926	2	515.7455444335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YSDDIPHAL_	ENSG00000104408|ENST00000220849|EIF3E;ENST00000518442.5_1_8:109247181-109261015:-|nuORF	128.8611167810002	0.015835461597062447	6				NaN	NaN	0	NaN	10517	3716	14233
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14236	36.595	NaN	14441	30	0	1461.6	0.106	+			51162	YPAQGVQQF	9	75	519.2558353197519	1036.4971177063037	2	519.2565307617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YPAQGVQQF_	EIF4G1|p.P1229Qfs*2|1|0.18|ENSG00000114867|chr3:184327606-184327606|C/-|frameshift_variant;EIF4G1|p.T436Hfs*40|1|0.21|ENSG00000114867|chr3:184321883-184321884|-/C|frameshift_variant;ENSG00000114867|ENST00000346169|EIF4G1;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1	128.8611167810002	0.015835461597062447	6				NaN	NaN	0	NaN	10518	3716	14233
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14237	36.597	NaN	11193	30	0	1808.5	0.106	+			28137	NAIVIHEVY	9	78	529.285349284686	1056.556145636172	2	529.2874145507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NAIVIHEVY_	ENSG00000132849|ENST00000642238|PATJ;ENST00000484562.5_1_1:62228564-62579919:+|nuORF;nc|ENSG00000132849|Q8NI35-2|PATJ;nc|ENSG00000132849|Q8NI35-3|PATJ;nc|ENSG00000132849|Q8NI35-5|PATJ;nc|ENSG00000132849|Q8NI35|PATJ	82.24051045832904	0.08786059719216216	6				NaN	NaN	0	NaN	10519	3716	14233
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14238	36.599	NaN	13633	30	0	1046.1	0.106				-1	 	0	69	502.79168677861827	1003.5688206240366	2	502.7922058105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10520	3716	14233
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14239	36.6	NaN	8098.2	30	0	790.81	0.037	+			51616	YYVNGTYRL	9	69	574.7904663085938	NaN	0	574.7904663085938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YYVNGTYRL_	ENSG00000145860|ENST00000424310|RNF145;ENST00000518062.1_1_5:158588183-158590023:-|nuORF;nc|ENSG00000145860|Q96MT1-2|RNF145;nc|ENSG00000145860|Q96MT1-3|RNF145;nc|ENSG00000145860|Q96MT1-4|RNF145;nc|ENSG00000145860|Q96MT1-5|RNF145;RNF145|p.T570Sfs*23|1|0.07|ENSG00000145860|chr5:159158953-159158954|-/AGCATAC|frameshift_variant	133.9934435666947	6.0293400307770907E-05	6				NaN	NaN	0	NaN	10521	3716	14233
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14240	36.601	NaN	6248.9	30	0	740.66	0.142	+			10759	FAFEHSEEY	9	80	579.739964749771	1157.465376566342	2	580.2423706054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FAFEHSEEY_	ENSG00000141002|ENST00000263346|TCF25;ENST00000568870.1_1_16:89958640-89960287:+|nuORF;TCF25|p.S448Lfs*3|1|0.21|ENSG00000141002|chr16:89900755-89900755|T/-|frameshift_variant	138.24224950522367	0.011304696901763419	6				NaN	NaN	0	NaN	10522	3716	14233
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14258	36.641	NaN	32049	30	0	5304.8	0.214			+	11092	FFCRQLSI	8	82	507.2659353742324	1012.5173178152648	2	507.26678466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FFCRQLSI_	REV__ENSG00000078589|ENST00000171757|P2RY10;REV__P2RY10|p.S321Vfs*7|1|0.05|ENSG00000078589|chrX:78961479-78961480|-/TGTAAAAAATA|frameshift_variant	71.37791200682192	0.3954169775488141	6				NaN	NaN	0	NaN	10537	3719	14257
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14259	36.644	NaN	7421.7	30	0	756.42	0.106	+			47267	VMSQALKATF	10	78	548.2956466659542	1094.5767403987084	2	548.29736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VMSQALKATF_	ENSG00000157557|ENST00000360938|ETS2	122.93914200107957	0.02317863035582428	6				NaN	NaN	0	NaN	10538	3719	14257
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14260	36.646	NaN	6772.5	30	0	1674.9	0.106				-1	 	0	54	424.2183830361742	846.4222131391484	2	424.2190856933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10539	3719	14257
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14261	36.648	NaN	7871.3	30	0	690.53	0.106	+			50904	YGFQEKEAF	9	70	559.7606202955035	1117.5066876578069	2	559.7613525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YGFQEKEAF_	ENSG00000163481|ENST00000295704|RNF25;RNF25|p.G250Efs*29|4|0.29|ENSG00000163481|chr2:218664791-218664791|C/-|frameshift_variant	158.07458414430337	0.004987072822166904	6				NaN	NaN	0	NaN	10540	3719	14257
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14262	36.65	NaN	6757.7	30	0	738.15	0.106	+			31703	QNNLYVQPY	9	66	569.781102021518	1137.547651109836	2	569.7855224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QNNLYVQPY_	ENSG00000168234|ENST00000317571|TTC39C;nc|ENSG00000168234|Q8N584-2|TTC39C	55.50420428727701	0.2510918378945873	6				NaN	NaN	0	NaN	10541	3719	14257
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14263	36.652	NaN	5696.3	30	0	629.15	0.035			+	46985	VKPDTNGEY	9	66	511.7421726908269	1021.4697924484539	2	513.24853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VKPDTNGEY_	REV__tr|U7STD1|U7STD1_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01368PE=4SV=1	40.5726180659479	0.4135428067754104	6				NaN	NaN	0	NaN	10542	3719	14257
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14264	36.652	NaN	2200.2	30	0	201.76	0.139			+	46753	VGSMLHFF	8	59	477.2312933087529	952.4480336843059	2	477.232177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_VGSM(Oxidation (M))LHFF_	REV__ENST00000494086.5_1_7:107220736-107224412:+|nuORF	44.53106598305862	0.628196326904373	6				NaN	NaN	0	NaN	10543	3719	14257
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14282	36.692	NaN	6747.8	30	0	945.68	0.215				-1	 	0	67	487.79694153959264	973.5793301459853	2	487.7972717285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10558	3722	14281
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14283	36.695	NaN	10530	30	0	1978.9	0.106				-1	 	0	79	571.3373687248351	1140.66018451647	2	571.3382568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10559	3722	14281
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14284	36.697	NaN	3559.5	30	0	349.56	0.106				-1	 	0	58	443.23688035103044	884.4592077688609	2	443.23712158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10560	3722	14281
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14285	36.699	NaN	3436.1	30	0	202.15	0.106			+	6863	CKVRSMQF	8	67	528.2612723235078	1054.5079917138155	2	528.2620239257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_C(Carbamidomethyl (C))KVRSMQF_	REV__ENSG00000174226|ENST00000311812|SNX31;REV__nc|ENSG00000174226|Q8N9S9-2|SNX31;REV__SNX31|p.F432Lfs*4|1|0.16|ENSG00000174226|chr8:100573892-100573892|A/-|frameshift_variant;REV__SNX31|p.K402Nfs*24|1|0.09|ENSG00000174226|chr8:100577040-100577040|T/-|frameshift_variant	44.116797842482775	0.6307669463330267	6				NaN	NaN	0	NaN	10561	3722	14281
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14286	36.701	NaN	3230.4	30	0	628.32	0.106	+			29585	PFLPPRKMV	9	65	542.8206702097699	1083.6267874863397	2	542.8219604492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PFLPPRKMV_	ENST00000428670.7_1_12:90049870-90102463:-|nuORF	33.51558372728122	0.4900267029546261	6				NaN	NaN	0	NaN	10562	3722	14281
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14287	36.703	NaN	2203.2	30	0	114.31	0.034			+	-1	SLKSVCPK	8	59	459.7587112240355	NaN	0	460.2004089355469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_SLKSVC(Carbamidomethyl (C))PK_	REV__ENST00000314442.7_1_12:121652330-121652468:+|nuORF	30.503639358989545	1.7418937515398478	6				NaN	NaN	0	NaN	10563	3722	14281
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14288	36.703	NaN	2604	30	0	241.46	0.142	+			42150	SYQRAFNEF	9	70	581.268865981603	1160.5231790300058	2	581.2694702148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SYQRAFNEF_	ENSG00000185215|ENST00000560869|TNFAIP2	55.08391021199286	0.2545954270840753	6				NaN	NaN	0	NaN	10564	3722	14281
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14304	36.737	NaN	41971	30	0	6099.3	0.214	+			19104	IYKDSSTFL	9	75	537.278856844018	1072.543160754836	2	537.2796020507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IYKDSSTFL_	ENSG00000145388|ENST00000388822|METTL14	167.22876102047192	0.0032399547248545047	6				NaN	NaN	0	NaN	10577	3725	14303
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14305	36.741	NaN	31873	30	0	6613.1	0.106	+			14495	GTCLFVAVK	9	78	497.7724229980665	993.530293062933	2	497.77288818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GTC(Carbamidomethyl (C))LFVAVK_	ENSG00000198752|ENST00000361246|CDC42BPB	148.04295825190792	0.0073252839830139265	6				NaN	NaN	0	NaN	10578	3725	14303
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14306	36.743	NaN	6638.1	30	0	585.1	0.106	+			27162	MCVAVGSAALV	11	74	510.7629853117789	1019.5114176903578	2	510.763916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MCVAVGSAALV_	ENSG00000114646|ENST00000264723|CSPG5;nc|ENSG00000114646|O95196-3|CSPG5;nc|ENSG00000114646|O95196|CSPG5	58.78195531508484	0.3343278462358323	6				NaN	NaN	0	NaN	10579	3725	14303
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14307	36.745	NaN	9185.1	30	0	1230.8	0.106			+	-1	WRQVCSPM	8	73	540.2441103475945	1078.473667761989	2	540.2442626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_WRQVC(Carbamidomethyl (C))SPM(Oxidation (M))_	REV__ENST00000360066.6_2_1:205501150-205501621:+|nuORF	50.0245360154114	0.5941082100236891	6				NaN	NaN	0	NaN	10580	3725	14303
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14308	36.747	NaN	5785.8	30	0	862.02	0.106	+			10842	FASPGQGQI	9	61	452.7290520317736	903.4435511303473	2	452.72930908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FASPGQGQI_	HERVH-int_dup4765|chr13:43060715-43061388:-|2.073122916940509|0.3800345561863495|2.45|479.0|25|2|anti-sense	90.77665401227738	0.06267569666681755	6				NaN	NaN	0	NaN	10581	3725	14303
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14309	36.748	NaN	6505.1	30	0	3479.5	0.039	+			40821	SVEEISTLVQK	11	51	411.5623579943292	NaN	0	411.56231689453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVEEISTLVQK_	ENSG00000055950|ENST00000318364|MRPL43;nc|ENSG00000055950|Q8N983-2|MRPL43;nc|ENSG00000055950|Q8N983-3|MRPL43;nc|ENSG00000055950|Q8N983-6|MRPL43;nc|ENSG00000055950|Q8N983-7|MRPL43;nc|ENSG00000055950|Q8N983|MRPL43	47.95952297671804	0.32997419910078585	6				NaN	NaN	0	NaN	10582	3725	14303
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14310	36.749	NaN	2435.3	30	0	183.2	0.138				-1	 	0	52	434.20448543231265	866.3944179314253	2	434.2047119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10583	3725	14303
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14328	36.788	NaN	14820	30	0	2113.5	0.214	+			12950	GESSLRNFTM	10	85	571.2679389096211	1140.521324886042	2	571.2692260742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GESSLRNFTM_	ENSG00000153147|ENST00000283131|SMARCA5;ENST00000515531.1_1_4:144464789-144465131:+|nuORF	68.62578634547417	0.2885473079336931	6				NaN	NaN	0	NaN	10598	3728	14327
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14329	36.792	NaN	7250.9	30	0	742.78	0.106	+			45608	TYPDVNNSI	9	74	511.7421726908269	1021.4697924484539	2	511.7428894042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TYPDVNNSI_	ENSG00000122958|ENST00000263559|VPS26A;nc|ENSG00000122958|O75436-2|VPS26A	96.0336014099291	0.047854655524928534	6				NaN	NaN	0	NaN	10599	3728	14327
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14330	36.794	NaN	8152.8	30	0	850.99	0.106	+			36447	SEVELMKV	8	72	467.7486562662652	933.4827595993304	2	467.7492980957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEVELMKV_	ENSG00000115758|ENST00000234111|ODC1	104.74654710444128	0.24806011021879068	6				NaN	NaN	0	NaN	10600	3728	14327
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14331	36.796	NaN	7774.9	30	0	1408.7	0.106				-1	 	0	72	476.2371055838971	950.4596582345943	2	476.23748779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10601	3728	14327
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14332	36.798	NaN	3757.6	30	0	260.37	0.106	+			42735	TDISARIL	8	68	444.7615657930238	887.5085786528476	2	444.7613830566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TDISARIL_	ENSG00000167986|ENST00000301764|DDB1;ENST00000414411.3_1_11:61081295-61081943:-|nuORF	56.72105179125745	0.5342425954139568	6				NaN	NaN	0	NaN	10602	3728	14327
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14333	36.799	NaN	2771.7	30	0	819.45	0.037	+			10286	ETMMFTFHK	9	66	586.2668876378984	1170.5192223425968	2	586.267333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ETMMFTFHK_	ENSG00000197747|ENST00000368811|S100A10;ENST00000478348.1_1_1:151957748-151958706:-|nuORF;ENST00000478574.5_1_1:151956596-151958706:-|nuORF	54.722347961057174	0.257609425301511	6				NaN	NaN	0	NaN	10603	3728	14327
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14334	36.8	NaN	2425.2	30	0	201.95	0.14	+			13437	GLGYLVPS	8	50	403.22601215353257	804.4374713738652	2	403.2260437011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GLGYLVPS_	ENSG00000226887|ENST00000443173|ERVMER34-1	29.841539824830324	0.7289191502596711	6				NaN	NaN	0	NaN	10604	3728	14327
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14352	36.839	NaN	29238	30	0	3044.5	0.214	+			45538	TYITSVSRL	9	86	520.2922186562159	1038.5698843792318	2	520.2929077148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TYITSVSRL_	ENSG00000164823|ENST00000451899|OSGIN2;nc|ENSG00000164823|Q9Y236|OSGIN2	123.20810148215591	0.019257656778428764	6				NaN	NaN	0	NaN	10619	3731	14351
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14353	36.843	NaN	19266	30	0	9641.4	0.106	+			34484	RVDGFGLLT	9	80	489.2728878798443	976.5312228264886	2	489.2740783691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RVDGFGLLT_	ENSG00000171160|ENST00000307450|MORN4;nc|ENSG00000171160|Q8NDC4-2|MORN4	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	10620	3731	14351
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14354	36.845	NaN	4752.7	30	0	511.46	0.106			+	10827	FARIQCLY	8	70	507.2659353742324	1012.5173178152648	2	507.2664794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FARIQCLY_	REV__ENSG00000173442|ENST00000309295|EHBP1L1	44.53106598305862	0.628196326904373	6				NaN	NaN	0	NaN	10621	3731	14351
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14355	36.847	NaN	7712	30	0	1121	0.106	+			47473	VQALKYENF	9	71	556.2921634087461	1110.569773884292	2	556.293212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VQALKYENF_	ENSG00000078142|ENST00000262039|PIK3C3;PIK3C3|p.F623Lfs*43|2|0.38|ENSG00000078142|chr18:42037716-42037716|T/-|frameshift_variant	138.06239232086	0.011389075116295402	6				NaN	NaN	0	NaN	10622	3731	14351
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14356	36.849	NaN	6078.9	30	0	700.01	0.106	+			26957	LYINHQFE	8	72	532.2633452027969	1062.5121374723938	2	532.2648315429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LYINHQFE_	ENSG00000214842|ENST00000399080|RAD51AP2	60.97194046774394	0.49215940876911696	6				NaN	NaN	0	NaN	10623	3731	14351
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14357	36.85	NaN	3974.3	30	0	322.38	0.033				-1	 	0	65	437.2642932031454	872.5140334730909	2	437.2646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10624	3731	14351
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14358	36.851	NaN	9947.6	30	0	3855.1	0.143	+			10691	EYVEKFYRI	9	80	623.8265776879937	1245.6386024427873	2	623.8267211914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EYVEKFYRI_	ENSG00000113522|ENST00000378823|RAD50;nc|ENSG00000113522|Q92878-2|RAD50;nc|ENSG00000113522|Q92878-3|RAD50;RAD50|p.R1279C|1|0.9|ENSG00000113522|chr5:132642260-132642260|C/T|missense_variant	82.7504851949679	0.08565546331141553	6				NaN	NaN	0	NaN	10625	3731	14351
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14376	36.89	NaN	21605	30	0	3951.2	0.214	+			31518	QLGSVLKNCDI	11	55	416.2198526179744	1245.6377284541234	3	416.2202453613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_QLGSVLKNC(Carbamidomethyl (C))DI_	ENSG00000003509|ENST00000002125|NDUFAF7;ENST00000474154.5_1_2:37458848-37468954:+|nuORF;nc|ENSG00000003509|Q7L592-2|NDUFAF7	42.33807565288922	0.5259510355945483	6				NaN	NaN	0	NaN	10640	3734	14375
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14377	36.894	NaN	11720	30	0	5433.5	0.106			+	12378	GDTIIILIQ	9	76	493.29946250560585	984.5843720780117	2	493.2998962402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GDTIIILIQ_	REV__VWA2|p.V157I|1|0.15|ENSG00000165816|chr10:114272837-114272837|G/A|missense_variant	35.15202426646627	0.4747332964206883	6				NaN	NaN	0	NaN	10641	3734	14375
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14378	36.896	NaN	4599.3	30	0	672.18	0.106	+			42098	SYISFFKHIS	10	72	614.8202765701407	1227.6260002070812	2	614.8216552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SYISFFKHIS_	ADAM30|p.M595*|1|0.06|ENSG00000134249|chr1:119894535-119894554|GGTATTCCCATGGGTTTCAT/-|frameshift_variant;ENSG00000134249|ENST00000369400|ADAM30;nc|ENSG00000134249|Q9UKF2-2|ADAM30	39.252832667884924	0.5560298534376815	6				NaN	NaN	0	NaN	10642	3734	14375
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14379	36.898	NaN	6502.3	30	0	484.7	0.106				-1	 	0	62	460.775529950097	919.536506966994	2	460.7760925292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10643	3734	14375
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14380	36.9	NaN	6706.5	30	0	917.79	0.106			+	-1	CGREGAARRVP	11	62	410.21642791754266	1227.627454352828	3	410.5513000488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_C(Carbamidomethyl (C))GREGAARRVP_	REV__ENST00000564537.5_1_16:777134-777421:+|nuORF	37.59989570853033	0.5907838038483115	6				NaN	NaN	0	NaN	10644	3734	14375
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14381	36.901	NaN	4842.5	30	0	638.77	0.037	+			43994	TPHDFIEHF	9	61	381.5134090116553	1141.518397635166	3	381.513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TPHDFIEHF_	ENSG00000110092|ENST00000227507|CCND1	63.30626980617807	0.18605348971131092	6				NaN	NaN	0	NaN	10645	3734	14375
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14382	36.902	NaN	4329.1	30	0	1536.8	0.143	+			4889	ATQDILKALSK	11	59	396.57107716609767	1186.691402098493	3	396.5712585449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATQDILKALSK_	ENSG00000085276|ENST00000651503|MECOM;MECOM|p.G611Efs*33|1|0.39|ENSG00000085276|chr3:169115476-169115476|C/-|frameshift_variant;MECOM|p.G614Efs*30|5|0.4|ENSG00000085276|chr3:169115469-169115469|T/-|frameshift_variant;MECOM|p.P513Qfs*15|2|0.39|ENSG00000085276|chr3:169115772-169115772|A/-|frameshift_variant;MECOM|p.S389Rfs*46|1|0.33|ENSG00000085276|chr3:169116140-169116143|CTGA/-|frameshift_variant;MECOM|p.V498Sfs*27|1|0.34|ENSG00000085276|chr3:169115816-169115817|-/T|frameshift_variant;nc|ENSG00000085276|Q03112-1|MECOM;nc|ENSG00000085276|Q03112-4|MECOM;nc|ENSG00000085276|Q03112-5|MECOM;nc|ENSG00000085276|Q03112-6|MECOM;nc|ENSG00000085276|Q03112-8|MECOM;nc|ENSG00000085276|Q03112|MECOM	70.39856735676683	0.2324169829117963	6				NaN	NaN	0	NaN	10646	3734	14375
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14400	36.941	NaN	51755	30	0	15785	0.214				-1	 	0	85	515.8101716161327	1029.6057902990653	2	515.8109130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10661	3737	14399
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14401	36.945	NaN	12478	30	0	883.03	0.106	+			47365	VPFHSDLGY	9	78	517.7518306968849	1033.4891084605697	2	517.7509155273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VPFHSDLGY_	ENSG00000100997|ENST00000339157|ABHD12;nc|ENSG00000100997|Q8N2K0-2|ABHD12;nc|ENSG00000100997|Q8N2K0-3|ABHD12	68.484700416344	0.1473408039581241	6				NaN	NaN	0	NaN	10662	3737	14399
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14402	36.947	NaN	12510	30	0	4206.9	0.106	+			46500	VETVYTHVL	9	73	530.7865516766559	1059.5585504201117	2	530.7877197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VETVYTHVL_	ENSG00000163902|ENST00000296255|RPN1	172.03106254824962	0.0024202251894594514	6				NaN	NaN	0	NaN	10663	3737	14399
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14403	36.949	NaN	37250	30	0	7441.9	0.106				-1	 	0	84	499.288729958344	996.562906983488	2	499.2890319824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10664	3737	14399
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14404	36.95	NaN	8724.6	30	0	1808.7	0.106				-1	 	0	62	457.28874028869484	912.5629276441897	2	457.2891845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10665	3737	14399
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14405	36.952	NaN	4460.5	30	0	449.91	0.033			+	37218	SKLPKAEI	8	63	443.27318626856027	884.5318196039206	2	443.2734680175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SKLPKAEI_	REV__ENSG00000174225|ENST00000450049|ARL13A;REV__nc|ENSG00000174225|Q5H913|ARL13A	52.936696900407355	0.5717071646657654	6				NaN	NaN	0	NaN	10666	3737	14399
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14406	36.953	NaN	3923	30	0	380.1	0.138	+			25387	LPHVTASF	8	55	436.23653717390437	870.4585214146088	2	436.23699951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LPHVTASF_	ENSG00000198788|ENST00000675028|MUC2;nc|ENSG00000198788|Q02817|MUC2	83.28718786952967	0.2977916691876266	6				NaN	NaN	0	NaN	10667	3737	14399
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14422	36.987	NaN	11721	30	0	1116.2	0.214	+			21668	KQALKYFNL	9	80	562.8260960455054	1123.6376391578108	2	562.8269653320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KQALKYFNL_	ENSG00000071537|ENST00000336735|SEL1L	152.47061609516894	0.006293267927334181	6				NaN	NaN	0	NaN	10680	3740	14421
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14423	36.991	NaN	6547.8	30	0	911.51	0.106			+	46574	VFLQPAPQ	8	64	450.25209239025975	898.4896318473195	2	450.2524719238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VFLQPAPQ_	REV__ENST00000472524.1_1_11:64122844-64124563:+|nuORF;REV__ENST00000479965.5_1_11:64120415-64123189:+|nuORF	52.29916861842294	0.578018602984656	6				NaN	NaN	0	NaN	10681	3740	14421
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14424	36.993	NaN	8490.9	30	0	608.42	0.106	+			8754	EEFTGQLKV	9	71	525.7789929757972	NaN	0	525.7774658203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EEFTGQLKV_	ENSG00000054654|ENST00000555002|SYNE2;nc|ENSG00000054654|Q8WXH0|SYNE2;SYNE2|p.A5240Qfs*5|1|0.07|ENSG00000054654|chr14:64152639-64152639|G/-|frameshift_variant;SYNE2|p.D3074Ffs*8|1|0.07|ENSG00000054654|chr14:64053132-64053133|-/TTTCTTTTTCAAATACTTG|frameshift_variant;SYNE2|p.F2563Ifs*28|1|0.34|ENSG00000054654|chr14:64051593-64051594|-/A|frameshift_variant;SYNE2|p.F2840Lfs*3|1|0.38|ENSG00000054654|chr14:64052427-64052427|T/-|frameshift_variant;SYNE2|p.F4992Lfs*13|1|0.39|ENSG00000054654|chr14:64140067-64140067|T/-|frameshift_variant;SYNE2|p.K1189Sfs*4|1|0.35|ENSG00000054654|chr14:64000642-64000642|A/-|frameshift_variant;SYNE2|p.L5308Ifs*18|1|0.12|ENSG00000054654|chr14:64158750-64158751|GG/-|frameshift_variant;SYNE2|p.M1669Wfs*6|1|0.36|ENSG00000054654|chr14:64017707-64017707|A/-|frameshift_variant;SYNE2|p.N1656Mfs*19|1|0.18|ENSG00000054654|chr14:64017669-64017669|A/-|frameshift_variant;SYNE2|p.S1830Kfs*9|1|0.34|ENSG00000054654|chr14:64021985-64021986|-/A|frameshift_variant;SYNE2|p.S6651Rfs*83|1|0.29|ENSG00000054654|chr14:64220596-64220597|-/G|frameshift_variant	56.43379154798735	0.16452882468284893	6				NaN	NaN	0	NaN	10682	3740	14421
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14425	36.994	NaN	1339.2	30	0	425.25	0.106	+			46702	VGLGLGVG	8	35	336.2074618812995	670.400370829399	2	336.2079772949219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VGLGLGVG_	ENST00000409419.5_1_19:40854631-40872336:+|nuORF;ENST00000409587.5_1_19:40854631-40871796:+|nuORF;ENST00000594085.5_1_19:40854631-40871460:+|nuORF	43.626045697637714	0.6338121648150432	6				NaN	NaN	0	NaN	10683	3740	14421
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14426	36.996	NaN	4828.9	30	0	819.28	0.106	+			27050	MAASSSSLEKS	11	68	549.258518011043	1096.5024830888858	2	549.2600708007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MAASSSSLEKS_	ENSG00000196834|ENST00000451531|POTEI	53.08895987439943	0.38514566451266113	6				NaN	NaN	0	NaN	10684	3740	14421
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14427	36.998	NaN	2584.5	30	0	694.13	0.037	+			24718	LHLLLDRDN	9	44	370.2082332580906	1107.6028703744719	3	370.2083740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LHLLLDRDN_	PIGM|p.P196L|1|0.29|ENSG00000143315|chr1:160031153-160031153|G/A|missense_variant	29.14955571784316	0.5308295550522326	6				NaN	NaN	0	NaN	10685	3740	14421
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14428	36.999	NaN	2583.5	30	0	307.78	0.142	+			36210	SELQDSNPEF	10	77	583.2524248250621	1164.4902967169241	2	583.252685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SELQDSNPEF_	ENSG00000124216|ENST00000244050|SNAI1	44.377184641726394	0.5088115166961078	6				NaN	NaN	0	NaN	10686	3740	14421
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14444	37.034	NaN	9953.9	30	0	1295.3	0.214			+	47826	VSKQEELL	8	64	473.2662107959193	944.5178686586386	2	473.2658996582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSKQEELL_	REV__ENSG00000188878|ENST00000636174|FBF1;REV__ENST00000585990.5_1_17:73910371-73916335:-|nuORF;REV__ENST00000593076.1_1_17:73910704-73911112:-|nuORF;REV__nc|ENSG00000188878|Q8TES7-2|FBF1;REV__nc|ENSG00000188878|Q8TES7-5|FBF1;REV__nc|ENSG00000188878|Q8TES7|FBF1	82.24051045832904	0.30490469762271794	6				NaN	NaN	0	NaN	10699	3743	14443
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14445	37.037	NaN	10670	30	0	2984.4	0.106				-1	 	0	60	481.27211320871686	960.5296734842337	2	481.2728271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10700	3743	14443
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14446	37.039	NaN	16188	30	0	3043.5	0.106				-1	 	0	75	555.2661409148074	1108.5177288964146	2	555.26708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10701	3743	14443
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14447	37.041	NaN	5432.6	30	0	663.23	0.106			+	-1	LMLLMTLIM	9	71	547.8041212187082	1093.5936895042164	2	547.8050537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_LM(Oxidation (M))LLMTLIM_	REV__ENSG00000122490|ENST00000397778|SLC66A2;REV__ENST00000351365.7_1_18:77663978-77709700:-|nuORF;REV__ENST00000466449.5_1_18:77690306-77703530:-|nuORF;REV__nc|ENSG00000122490|Q8N2U9-2|SLC66A2;REV__nc|ENSG00000122490|Q8N2U9-3|SLC66A2	68.484700416344	0.1473408039581241	6				NaN	NaN	0	NaN	10702	3743	14443
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14448	37.043	NaN	4135.6	30	0	290.07	0.106	+			8383	EAMRIGAEVY	10	66	569.781102021518	1137.547651109836	2	569.7816162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EAMRIGAEVY_	ENO1|p.D318Mfs*5|1|0.43|ENSG00000074800|chr1:8864006-8864006|C/-|frameshift_variant;ENO3|p.V367*|1|0.39|ENSG00000108515|chr17:4956599-4956599|G/-|frameshift_variant;ENSG00000074800|ENST00000234590|ENO1;ENSG00000108515|ENST00000519602|ENO3;ENST00000464920.1_1_1:8921421-8930582:-|nuORF;ENST00000521659.5_2_17:4855435-4858958:+|nuORF;nc|ENSG00000074800|P06733-2|ENO1;nc|ENSG00000108515|P13929-2|ENO3;nc|ENSG00000108515|P13929-3|ENO3	70.8162118820467	0.27065172005956	6				NaN	NaN	0	NaN	10703	3743	14443
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14449	37.045	NaN	6756.5	30	0	908.75	0.034	+			668	AEAIRILAA	9	76	464.28399648786876	926.5534400425375	2	464.2845458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEAIRILAA_	ENSG00000165283|ENST00000356493|STOML2;nc|ENSG00000165283|Q9UJZ1-2|STOML2	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	10704	3743	14443
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14450	37.045	NaN	3923.1	30	0	458.76	0.137	+			17520	IDLAGLLQ	8	67	421.752215564931	841.4898781966621	2	421.75244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IDLAGLLQ_	ENSG00000125676|ENST00000245838|THOC2;THOC2|p.L784Ffs*4|1|0.3|ENSG00000125676|chrX:123631817-123631818|-/A|frameshift_variant	82.30502934623384	0.30436709589983096	6				NaN	NaN	0	NaN	10705	3743	14443
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14465	37.079	NaN	11179	30	0	2520.9	0.214	+			47079	VLIGSSHIL	9	68	469.78637731972293	937.5582017062459	2	469.7868347167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VLIGSSHIL_	ENSG00000076944|ENST00000221283|STXBP2;ENST00000601061.1_1_19:7712126-7712693:+|nuORF;nc|ENSG00000076944|Q15833-2|STXBP2;nc|ENSG00000076944|Q15833-3|STXBP2	65.80317337860623	0.1652391959156183	6				NaN	NaN	0	NaN	10717	3746	14464
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14466	37.082	NaN	12210	30	0	1308.8	0.106				-1	 	0	71	456.7333536677877	911.4521544023754	2	456.7336730957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10718	3746	14464
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14467	37.084	NaN	27191	30	0	11713	0.106				-1	YEQTFSVWM	9	81	603.7606217091004	1205.5066904850007	2	603.7623291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_YEQTFSVWM(Oxidation (M))_	ENSG00000080854|ENST00000533871|IGSF9B;IGSF9B|p.T1083Hfs*72|2|0.42|ENSG00000080854|chr11:133920478-133920479|-/G|frameshift_variant;IGSF9B|p.T1083Pfs*48|1|0.11|ENSG00000080854|chr11:133920479-133920479|G/-|frameshift_variant;nc|ENSG00000080854|Q9UPX0|IGSF9B	47.657333605630114	0.33044192980041115	6				NaN	NaN	0	NaN	10719	3746	14464
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14468	37.086	NaN	7608.5	30	0	875.64	0.106			+	13795	GQKILSIIY	9	86	517.8151558308435	1033.615758728487	2	517.8159790039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GQKILSIIY_	REV__tr|U7SVY3|U7SVY3_FUSNUABCtransporterpermeaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01384PE=4SV=1	49.44154591367651	0.3095138337212152	6				NaN	NaN	0	NaN	10720	3746	14464
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14469	37.088	NaN	8729.7	30	0	2901.1	0.106	+			31350	QIYGVFDEK	9	77	549.777580981518	1097.5406090298359	2	549.7774658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QIYGVFDEK_	ENSG00000150712|ENST00000382142|MTMR12;nc|ENSG00000150712|Q9C0I1-2|MTMR12;nc|ENSG00000150712|Q9C0I1-3|MTMR12	47.95952297671804	0.32689736945648856	6				NaN	NaN	0	NaN	10721	3746	14464
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14470	37.09	NaN	14462	30	0	1994.2	0.035	+			42926	TEIGRVIQV	9	87	507.79991785830015	1013.5852827834003	2	507.8009033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TEIGRVIQV_	ENSG00000111275|ENST00000261733|ALDH2;ENST00000548536.1_1_12:112213467-112247376:+|nuORF;nc|ENSG00000111275|P05091-2|ALDH2	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	10722	3746	14464
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14471	37.09	NaN	7004.4	30	0	2565.9	0.145	+			1429	AEYGEIKNIHL	11	60	429.56207194518066	1285.664386435742	3	429.5626220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AEYGEIKNIHL_	ENSG00000265241|ENST00000583313|RBM8A;nc|ENSG00000265241|Q9Y5S9-2|RBM8A	43.650786325866115	0.5079891456189096	6				NaN	NaN	0	NaN	10723	3746	14464
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14489	37.13	NaN	57274	30	0	7139.3	0.214				-1	 	0	89	439.7578191235175	877.501085313835	2	439.7580871582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10738	3749	14488
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14490	37.134	NaN	21306	30	0	2054.2	0.106	+			18440	ISCVNLAFK	9	90	526.2837228922234	NaN	0	526.2839965820312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_ISC(Carbamidomethyl (C))VNLAFK_	ENST00000227758.6_3_11:102219989-102220022:+|nuORF	117.81106730687013	0.0026430897281881707	6				NaN	NaN	0	NaN	10739	3749	14488
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14491	37.136	NaN	24357	30	0	4196.5	0.106	+			42212	TAAGLMHTF	9	85	474.7333823549291	947.4522117766583	2	474.733642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TAAGLMHTF_	ENSG00000086475|ENST00000327347|SEPHS1;ENSG00000179918|ENST00000478753|SEPHS2;ENST00000446112.1_1_X:72989760-72990255:+|nuORF;nc|ENSG00000086475|P49903-3|SEPHS1;nc|ENSG00000086475|P49903-4|SEPHS1	161.89823264540465	0.004149850016316161	6				NaN	NaN	0	NaN	10740	3749	14488
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14492	37.137	NaN	4928.3	30	0	404.83	0.106	+			5620	AVCMFLASK	9	75	513.7579550348337	1025.5013571364673	2	513.7590942382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_AVC(Carbamidomethyl (C))MFLASK_	ENSG00000118971|ENST00000261254|CCND2;nc|ENSG00000118971|P30279-2|CCND2	47.657333605630114	0.33044192980041115	6				NaN	NaN	0	NaN	10741	3749	14488
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14493	37.139	NaN	4822.4	30	0	1113.6	0.106			+	25665	LRCLDHESI	9	79	543.2718524129314	1084.5291518926626	2	543.7761840820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LRCLDHESI_	REV__ENST00000543687.1_1_12:124241315-124242576:+|nuORF	58.78195531508484	0.22376836668196862	6				NaN	NaN	0	NaN	10742	3749	14488
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14494	37.141	NaN	3344.9	30	0	507.08	0.037			+	17498	IDFGKRGENF	10	68	591.7983708990672	NaN	0	591.7984008789062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IDFGKRGENF_	REV__ABCA3|p.G1334Afs*12|1|0.4|ENSG00000167972|chr16:2283220-2283220|C/-|frameshift_variant;REV__ENSG00000167972|ENST00000301732|ABCA3	49.44154591367651	0.30913310806145605	6				NaN	NaN	0	NaN	10743	3749	14488
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14495	37.142	NaN	2946.5	30	0	314.94	0.141	+			25442	LPPGVHISY	9	63	491.7707667247353	981.5269805162707	2	491.7713928222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LPPGVHISY_	ENSG00000139626|ENST00000267082|ITGB7;ENST00000548269.1_1_12:53587490-53588125:-|nuORF;nc|ENSG00000139626|P26010-2|ITGB7	68.484700416344	0.1473408039581241	6				NaN	NaN	0	NaN	10744	3749	14488
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14513	37.181	NaN	336070	30	0	67749	0.175	+			41596	SVQGIIIYR	9	97	524.8104575367375	1047.606362140275	2	524.8111572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVQGIIIYR_	ENSG00000005022|ENST00000317881|SLC25A5;ENSG00000151729|ENST00000281456|SLC25A4;ENSG00000169100|ENST00000381401|SLC25A6;ENST00000406156.2_1_6:121975405-121975696:+|nuORF;ENST00000435239.1_1_7:32511604-32512018:+|nuORF	163.1509380574825	0.003936019289634439	6				NaN	NaN	0	NaN	10759	3752	14512
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14514	37.184	NaN	50294	30	0	9304.9	0.106	+			11473	FNQSSTLTI	9	89	505.7609991263456	1009.5074453194912	2	506.2642517089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FNQSSTLTI_	ENSG00000183850|ENST00000597761|ZNF730	76.7741389293348	0.11149722112137898	6				NaN	NaN	0	NaN	10760	3752	14512
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14515	37.186	NaN	11403	30	0	1593.7	0.106	+			45609	TYPDVNNSI	9	81	511.7421726908269	1021.4697924484539	2	511.74298095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TYPDVNNSI_	ENSG00000122958|ENST00000263559|VPS26A;nc|ENSG00000122958|O75436-2|VPS26A	90.60085204095205	0.06317133949006545	6				NaN	NaN	0	NaN	10761	3752	14512
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14516	37.188	NaN	13987	30	0	1160	0.106	+			27672	MPTKTIEVL	9	86	516.293220331673	1030.5718877301458	2	516.2939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MPTKTIEVL_	ENSG00000175581|ENST00000310614|MRPL48;ENST00000544140.5_1_11:73555872-73571072:+|nuORF;nc|ENSG00000175581|Q96GC5-3|MRPL48	58.22992032128504	0.22837015374068087	6				NaN	NaN	0	NaN	10762	3752	14512
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14517	37.19	NaN	10605	30	0	1770.1	0.106	+			47449	VPVDLQHQF	9	77	541.7846989697092	1081.5548450062183	2	541.7855834960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VPVDLQHQF_	ENSG00000132326|ENST00000254657|PER2;PER2|p.P894Hfs*125|1|0.41|ENSG00000132326|chr2:238253342-238253342|G/-|frameshift_variant	98.58198989935565	0.04066992115528678	6				NaN	NaN	0	NaN	10763	3752	14512
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14518	37.191	NaN	6974.3	30	0	524.67	0.106	+			28251	NDIVISKL	8	70	451.2701169060267	900.5256808788534	2	451.2708740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NDIVISKL_	ENSG00000113141|ENST00000417647|IK	85.86182877749512	0.2899975309073281	6				NaN	NaN	0	NaN	10764	3752	14512
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14519	37.193	NaN	6722.2	30	0	714.18	0.033				-1	 	0	69	421.7757505731439	841.5369482130878	2	421.7762451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10765	3752	14512
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14538	37.229	NaN	11272	30	0	4312.3	0.214	+			11823	FSVLIYSLY	9	78	552.8034788320883	1103.5924047309766	2	552.806396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FSVLIYSLY_	ENST00000307602.8_1_8:42881248-42881428:+|nuORF	49.536043120802724	0.308405419312776	6				NaN	NaN	0	NaN	10781	3755	14537
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14539	37.232	NaN	12244	30	0	3144	0.106				-1	 	0	65	466.2759454316559	930.5373379301118	2	466.27618408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10782	3755	14537
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14540	37.234	NaN	5615.8	30	0	497.28	0.106	+			41136	SVITQVLNK	9	71	501.3024264490677	1000.5902999649354	2	501.3029479980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVITQVLNK_	ENSG00000164985|ENST00000380733|PSIP1;PSIP1|p.S443Y|1|0.29|ENSG00000164985|chr9:15468722-15468722|G/T|missense_variant	141.52041321563706	0.009766778904176347	6				NaN	NaN	0	NaN	10783	3755	14537
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14541	37.236	NaN	8082.5	30	0	3499.7	0.106	+			20666	KGLLPHPT	8	58	431.76004421715146	861.5055355011029	2	431.7605895996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KGLLPHPT_	ENST00000310942.8_1_17:77758954-77759245:+|nuORF	38.80614096846853	0.6637206697844082	6				NaN	NaN	0	NaN	10784	3755	14537
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14542	37.238	NaN	6363.9	30	0	720.55	0.106	+			26468	LTKLLTSEEL	10	73	573.8344803438207	1145.6544077544413	2	573.835205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LTKLLTSEEL_	ENSG00000149932|ENST00000279396|TMEM219	35.15202426646627	0.5927656479315102	6				NaN	NaN	0	NaN	10785	3755	14537
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14543	37.24	NaN	4624.9	30	0	271.4	0.035	+			1484	AFMVNGQKF	9	76	521.2611767469366	1040.507800560673	2	521.2620239257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AFMVNGQKF_	ENSG00000198901|ENST00000394249|PRC1;nc|ENSG00000198901|O43663-3|PRC1;nc|ENSG00000198901|O43663-4|PRC1	123.9887779854562	0.018785054595953452	6				NaN	NaN	0	NaN	10786	3755	14537
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14544	37.24	NaN	3248.4	30	0	242.16	0.14			+	16991	HPSKSHIEE	9	67	532.2633452027969	1062.5121374723938	2	532.2642211914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HPSKSHIEE_	REV__ENST00000434724.6_1_16:11966790-11966895:-|nuORF	44.116797842482775	0.37197099687881774	6				NaN	NaN	0	NaN	10787	3755	14537
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14562	37.279	NaN	50274	30	0	17342	0.214				-1	 	0	81	550.7749819694938	1099.5354110057874	2	550.7761840820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10802	3758	14561
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14563	37.282	NaN	16570	30	0	2331.5	0.106				-1	 	0	75	454.2653756833496	906.5161984334992	2	454.265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10803	3758	14561
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14564	37.284	NaN	6410.4	30	0	939	0.106	+			26558	LTSLLAMTR	9	79	503.29094319260736	1004.5673334520147	2	503.2915344238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LTSLLAMTR_	nc|ENSG00000262085|Q8NH06|OR1P1	66.42927471994793	0.16001998865088202	6				NaN	NaN	0	NaN	10804	3758	14561
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14565	37.286	NaN	8802.6	30	0	669.63	0.106				-1	 	0	78	460.775529950097	919.536506966994	2	460.7761535644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10805	3758	14561
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14566	37.288	NaN	5856.9	30	0	1196.9	0.106				-1	 	0	66	372.7172504787019	743.4199480242038	2	372.7174987792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10806	3758	14561
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14567	37.29	NaN	4614.1	30	0	635.36	0.035	+			1878	AILNYIASK	9	72	496.7912627417868	991.5679725503736	2	496.7922668457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AILNYIASK_	ENSG00000174156|ENST00000211122|GSTA3;ENSG00000182793|ENST00000370989|GSTA5;ENSG00000243955|ENST00000334575|GSTA1;ENSG00000244067|ENST00000493422|GSTA2	93.5975768576971	0.05472259948179787	6				NaN	NaN	0	NaN	10807	3758	14561
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14568	37.29	NaN	6425.9	30	0	602.51	0.14	+			51361	YTAYDRAY	8	77	511.7327616788294	1021.4509704244588	2	511.7339782714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YTAYDRAY_	ENSG00000102359|ENST00000373004|SRPX2;SRPX2|p.E438Rfs*12|1|0.24|ENSG00000102359|chrX:100670896-100670896|C/-|frameshift_variant	47.91560031466742	0.6071945918984287	6				NaN	NaN	0	NaN	10808	3758	14561
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14584	37.325	NaN	10979	30	0	1734.6	0.214			+	7558	DHTVQNIQTM	10	68	601.7763692236499	1201.5381855140997	2	601.7779541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_DHTVQNIQTM(Oxidation (M))_	REV__ENSG00000124486|ENST00000378308|USP9X;REV__nc|ENSG00000124486|Q93008-3|USP9X;REV__USP9X|p.K1773Nfs*9|1|0.28|ENSG00000124486|chrX:41214693-41214693|A/-|frameshift_variant;REV__USP9X|p.K2377*|1|0.88|ENSG00000124486|chrX:41229318-41229319|-/T|frameshift_variant;REV__USP9X|p.Y1953Mfs*7|1|0.72|ENSG00000124486|chrX:41216419-41216419|T/-|frameshift_variant	93.1432384553994	0.11307820852620741	6				NaN	NaN	0	NaN	10821	3761	14583
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14585	37.329	NaN	8488.1	30	0	1467.4	0.106				-1	 	0	61	436.7757089177124	871.5368649022248	2	436.7760009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10822	3761	14583
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14586	37.331	NaN	17749	30	0	4054.1	0.106			+	18825	ITYKPLDLQ	9	73	545.8113241240543	1089.6080953149085	2	545.8123779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ITYKPLDLQ_	REV__ENSG00000182568|ENST00000338745|SATB1;REV__nc|ENSG00000182568|Q01826-2|SATB1	131.61620852596164	0.014413238321579053	6				NaN	NaN	0	NaN	10823	3761	14583
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14587	37.333	NaN	5989.8	30	0	1586.9	0.106	+			8615	ECRITSNFVI	10	50	394.5376065715787	1180.590990314936	3	394.53778076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ECRITSNFVI_	ENSG00000133606|ENST00000255977|MKRN1;ENST00000475010.5_1_7:140155450-140179030:-|nuORF;nc|ENSG00000133606|Q9UHC7-2|MKRN1;nc|ENSG00000133606|Q9UHC7-3|MKRN1	34.172542307311794	0.6007644933930345	6				NaN	NaN	0	NaN	10824	3761	14583
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14588	37.334	NaN	4189.6	30	0	491.44	0.106			+	37791	SLYQVAPF	8	61	462.7460711912319	923.4775894492639	2	462.74456787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SLYQVAPF_	REV__ENSG00000132522|ENST00000380728|GPS2;REV__ENST00000571697.5_1_17:7216461-7217028:-|nuORF;REV__ENST00000573807.5_1_17:7216558-7216813:-|nuORF;REV__nc|ENSG00000132522|Q13227-2|GPS2	50.0245360154114	0.5941082100236891	6				NaN	NaN	0	NaN	10825	3761	14583
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14589	37.336	NaN	1794.7	30	0	141.83	0.033				-1	 	0	57	448.28926589161017	894.5639788500204	2	449.291748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10826	3761	14583
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14590	37.337	NaN	2098.7	30	0	91.036	0.141	+			19105	IYKDSSTFL	9	68	537.278856844018	1072.543160754836	2	537.2791137695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IYKDSSTFL_	ENSG00000145388|ENST00000388822|METTL14	32.81241826257853	0.4965981579233955	6				NaN	NaN	0	NaN	10827	3761	14583
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14608	37.376	NaN	18719	30	0	3888.6	0.214				-1	 	0	65	473.2837909453784	944.5530289575569	2	473.28411865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10842	3764	14607
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14609	37.38	NaN	9993.7	30	0	3265.5	0.106	+			2094	ALFDGVVSK	9	62	468.2628796013655	934.511206269531	2	468.2630615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ALFDGVVSK_	ENSG00000151806|ENST00000281543|GUF1;ENST00000506793.5_1_4:44680541-44700695:+|nuORF;GUF1|p.K645Sfs*2|5|0.23|ENSG00000151806|chr4:44698598-44698598|A/-|frameshift_variant	65.46538089061403	0.16805504838372562	6				NaN	NaN	0	NaN	10843	3764	14607
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14610	37.382	NaN	10787	30	0	1576.3	0.106	+			12833	GENLKVLTV	9	72	486.78888568317785	971.5632184331557	2	486.7894287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GENLKVLTV_	ENSG00000068784|ENST00000263736|SRBD1;nc|ENSG00000068784|Q8N5C6-2|SRBD1;SRBD1|p.R441H|1|0.17|ENSG00000068784|chr2:45562740-45562740|C/T|missense_variant;SRBD1|p.T783Ifs*12|1|0.05|ENSG00000068784|chr2:45413279-45413280|-/CCAAA|frameshift_variant	70.39856735676683	0.13906523160059378	6				NaN	NaN	0	NaN	10844	3764	14607
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14611	37.384	NaN	9225.3	30	0	1181	0.106				-1	ERCGKILF	8	77	511.7752048189956	1021.5358567047912	2	511.7794494628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_ERC(Carbamidomethyl (C))GKILF_	PDE7B|p.E11K|1|0.15|ENSG00000171408|chr6:135947473-135947473|G/A|missense_variant	49.44154591367651	0.597725784090933	6				NaN	NaN	0	NaN	10845	3764	14607
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14612	37.385	NaN	11526	30	0	4629.6	0.106				-1	LVNCRTNEI	9	61	373.5255019991848	1117.5546765977545	3	373.52569580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_LVNC(Carbamidomethyl (C))RTNEI_	ENSG00000115548|ENST00000312912|KDM3A;ENST00000441719.5_1_2:86711112-86716803:+|nuORF	44.377184641726394	0.36891676396732553	6				NaN	NaN	0	NaN	10846	3764	14607
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14613	37.387	NaN	6155.2	30	0	564.01	0.035	+			49227	VVNGRVLEL	9	72	499.8027144361955	997.590875939191	2	499.8031311035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VVNGRVLEL_	ENSG00000135597|ENST00000450536|REPS1;ENST00000531675.1_1_6:139272213-139308858:-|nuORF;nc|ENSG00000135597|Q96D71-2|REPS1;nc|ENSG00000135597|Q96D71-3|REPS1;nc|ENSG00000135597|Q96D71-4|REPS1;REPS1|p.F519Yfs*3|1|0.21|ENSG00000135597|chr6:138917599-138917600|AA/-|frameshift_variant;REPS1|p.P550Lfs*14|1|0.22|ENSG00000135597|chr6:138915929-138915929|G/-|frameshift_variant	95.81516180277367	0.04847050768394289	6				NaN	NaN	0	NaN	10847	3764	14607
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14614	37.388	NaN	15251	30	0	2874.3	0.144				-1	 	0	71	366.54959312503706	1096.6269499753112	3	366.5498962402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10848	3764	14607
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14632	37.427	NaN	133630	30	0	41031	0.206	+			41705	SVSDLFNTK	9	101	505.7609991263456	1009.5074453194912	2	505.7611999511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVSDLFNTK_	ENSG00000054654|ENST00000555002|SYNE2;ENST00000557005.1_1_14:64469755-64489638:+|nuORF;nc|ENSG00000054654|Q8WXH0|SYNE2;SYNE2|p.A5240Qfs*5|1|0.07|ENSG00000054654|chr14:64152639-64152639|G/-|frameshift_variant;SYNE2|p.D3074Ffs*8|1|0.07|ENSG00000054654|chr14:64053132-64053133|-/TTTCTTTTTCAAATACTTG|frameshift_variant;SYNE2|p.F2563Ifs*28|1|0.34|ENSG00000054654|chr14:64051593-64051594|-/A|frameshift_variant;SYNE2|p.F2840Lfs*3|1|0.38|ENSG00000054654|chr14:64052427-64052427|T/-|frameshift_variant;SYNE2|p.F4992Lfs*13|1|0.39|ENSG00000054654|chr14:64140067-64140067|T/-|frameshift_variant;SYNE2|p.L5308Ifs*18|1|0.12|ENSG00000054654|chr14:64158750-64158751|GG/-|frameshift_variant;SYNE2|p.S1830Kfs*9|1|0.34|ENSG00000054654|chr14:64021985-64021986|-/A|frameshift_variant;SYNE2|p.S6651Rfs*83|1|0.29|ENSG00000054654|chr14:64220596-64220597|-/G|frameshift_variant	128.60217544463768	0.015992218256422188	6				NaN	NaN	0	NaN	10863	3767	14631
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14633	37.431	NaN	75359	30	0	42779	0.106	+			20826	KIFYNSGPK	9	85	527.289723905895	1052.56489487859	2	527.2904663085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KIFYNSGPK_	ENSG00000083544|ENST00000377881|TDRD3;ENST00000471710.2_1_13:61103135-61109406:+|nuORF;nc|ENSG00000083544|Q9H7E2-2|TDRD3;nc|ENSG00000083544|Q9H7E2|TDRD3	82.24051045832904	0.08786059719216216	6				NaN	NaN	0	NaN	10864	3767	14631
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14634	37.433	NaN	8660.9	30	0	1887.4	0.106	+			51591	YYPAKIEAI	9	65	534.2925708647664	NaN	0	534.2927856445312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YYPAKIEAI_	ENSG00000129292|ENST00000395386|PHF20L1;ENST00000361997.9_1_8:133790074-133829825:+|nuORF;ENST00000395383.5_1_8:133790074-133836319:+|nuORF;nc|ENSG00000129292|A8MW92-2|PHF20L1;nc|ENSG00000129292|A8MW92-4|PHF20L1;PHF20L1-CHMP1A|1|fusion;PHF20L1|p.E981Gfs*15|1|0.18|ENSG00000129292|chr8:132845806-132845807|-/G|frameshift_variant;PHF20L1|p.K574Rfs*28|1|0.31|ENSG00000129292|chr8:132825341-132825341|A/-|frameshift_variant;PHF20L1|p.N322Mfs*42|5|0.3|ENSG00000129292|chr8:132814664-132814664|A/-|frameshift_variant;PHF20L1|p.V535*|4|0.38|ENSG00000129292|chr8:132824019-132824019|A/-|frameshift_variant	43.650786325866115	0.2504488100985368	6				NaN	NaN	0	NaN	10865	3767	14631
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14635	37.435	NaN	9207.4	30	0	2119.9	0.106	+			26629	LVALSFHSLE	10	53	372.54107137544963	1114.601384726549	3	372.5411376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LVALSFHSLE_	ENSG00000169519|ENST00000407364|METTL15;ENST00000481421.1_1_3:156431675-156432128:-|nuORF	53.351449002276354	0.42630798468005626	6				NaN	NaN	0	NaN	10866	3767	14631
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14636	37.436	NaN	3708.9	30	0	366.66	0.106			+	28338	NEHSVGIVI	9	74	484.2631774523295	966.511801971459	2	484.2641296386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NEHSVGIVI_	REV__tr|U7STV7|U7STV7_FUSNUGlutamyl-tRNAreductaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=hemAPE=3SV=1	37.15910966729921	0.4535818937225704	6				NaN	NaN	0	NaN	10867	3767	14631
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14637	37.438	NaN	5615.6	30	0	627.09	0.106			+	33659	RNEERLAK	8	64	508.28698679287237	1014.5594206525448	2	508.28759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RNEERLAK_	REV__ENSG00000174015|ENST00000310521|CBY2;REV__nc|ENSG00000174015|Q8NA61-2|CBY2	34.172542307311794	0.6954784234644539	6				NaN	NaN	0	NaN	10868	3767	14631
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14638	37.44	NaN	16132	30	0	2475	0.036	+			37559	SLMHSFILK	9	83	538.3013173748536	1074.5880818165072	2	538.3018798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SLMHSFILK_	ENSG00000125971|ENST00000357156|DYNLRB1;ENST00000480759.1_1_20:33117938-33128425:+|nuORF	139.97047562133406	0.010493916756945389	6				NaN	NaN	0	NaN	10869	3767	14631
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14657	37.478	NaN	67683	30	0	11164	0.214	+			49273	VVQDGITLITK	11	100	593.8551654993967	1185.6957780655932	2	593.8557739257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVQDGITLITK_	ENSG00000079246|ENST00000392132|XRCC5	189.1659626418407	2.0971886843894006E-06	6				NaN	NaN	0	NaN	10885	3770	14656
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14658	37.481	NaN	16911	30	0	2364.3	0.106	+			35902	SEFKAMDSI	9	80	514.2412248949229	1026.4678968566457	2	514.241943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEFKAMDSI_	CTNNA1|p.L897I|1|0.68|ENSG00000044115|chr5:138934057-138934057|C/A|missense_variant;ENSG00000044115|ENST00000302763|CTNNA1;ENST00000522792.1_1_5:138268134-138269775:+|nuORF;nc|ENSG00000044115|P35221-2|CTNNA1;nc|ENSG00000044115|P35221-3|CTNNA1	123.20810148215591	0.019257656778428764	6				NaN	NaN	0	NaN	10886	3770	14656
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14659	37.483	NaN	6707.8	30	0	622.63	0.106	+			36490	SEVVDVAKL	9	68	480.27324106128526	958.5319291893705	2	480.27374267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEVVDVAKL_	ENSG00000145555|ENST00000513610|MYO10;nc|ENSG00000145555|Q9HD67-3|MYO10	80.45461616416974	0.09558281504443908	6				NaN	NaN	0	NaN	10887	3770	14656
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14660	37.485	NaN	3160.6	30	0	452.54	0.106	+			30084	PQQGEAML	8	57	437.20995653157075	872.4053601299415	2	437.2099914550781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PQQGEAML_	ENSG00000261609|ENST00000648994|GAN	65.80317337860623	0.44433089765398776	6				NaN	NaN	0	NaN	10888	3770	14656
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14661	37.487	NaN	5120.4	30	0	863.3	0.106	+			28515	NICSIYNLK	9	66	562.7913226444152	1123.5680923556304	2	562.7926025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_NIC(Carbamidomethyl (C))SIYNLK_	ENSG00000078369|ENST00000378609|GNB1;ENSG00000114450|ENST00000232564|GNB4;GNB4|p.D118N|1|0.28|ENSG00000114450|chr3:179414963-179414963|C/T|missense_variant;nc|ENSG00000078369|P62873-2|GNB1	109.47833844074708	0.029530294723441826	6				NaN	NaN	0	NaN	10889	3770	14656
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14662	37.489	NaN	3189.7	30	0	182.31	0.035	+			2270	ALWISTSSAG	10	70	496.75628239723625	991.4980118612725	2	496.7571105957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ALWISTSSAG_	ENSG00000135439|ENST00000547588|AGAP2;nc|ENSG00000135439|Q99490|AGAP2	63.30626980617807	0.33577009411590547	6				NaN	NaN	0	NaN	10890	3770	14656
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14663	37.489	NaN	3395.4	30	0	268.78	0.14	+			20386	KESTLHLVL	9	60	520.311264032733	NaN	0	520.3109130859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KESTLHLVL_	ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000392399.3_1_2:137087013-137087097:-|nuORF;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;UBB|p.D191Tfs*35|2|0.18|ENSG00000170315|chr17:16382471-16382471|C/-|frameshift_variant;UBB|p.D191Tfs*35|2|0.18|ENSG00000170315|chr17:16382471-16382471|C/-|frameshift_variant	36.446750945000026	0.29355505452396785	6				NaN	NaN	0	NaN	10891	3770	14656
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14681	37.529	NaN	18106	30	0	8257.1	0.214				-1	 	0	72	448.28926589161017	894.5639788500204	2	448.2898864746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10906	3773	14680
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14682	37.532	NaN	9942.2	30	0	1438.1	0.106	+			41597	SVQGIIIYR	9	77	524.8104575367375	1047.606362140275	2	524.8116455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVQGIIIYR_	ENSG00000005022|ENST00000317881|SLC25A5;ENSG00000151729|ENST00000281456|SLC25A4;ENSG00000169100|ENST00000381401|SLC25A6;ENST00000406156.2_1_6:121975405-121975696:+|nuORF;ENST00000435239.1_1_7:32511604-32512018:+|nuORF	104.01359247289065	0.03510646158778409	6				NaN	NaN	0	NaN	10907	3773	14680
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14683	37.534	NaN	8728.1	30	0	1264.5	0.106	+			14022	GSFVSSLVK	9	76	462.26308100919135	922.5116090851827	2	462.26336669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GSFVSSLVK_	ENSG00000172016|ENST00000305165|REG3A	54.722347961057174	0.257609425301511	6				NaN	NaN	0	NaN	10908	3773	14680
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14684	37.536	NaN	15615	30	0	6275.5	0.106	+			11061	FERIKEEL	8	71	532.2933051874306	NaN	0	532.29345703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FERIKEEL_	tr|U7STB1|U7STB1_FUSNUProteintranslocasesubunitSecDOS=FusobacteriumnucleatumCTI-5OX=1316586GN=secDPE=3SV=1	76.7741389293348	1.7418937515398478	6				NaN	NaN	0	NaN	10909	3773	14680
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14685	37.538	NaN	5415.8	30	0	821.59	0.106			+	18826	ITYKPLDLQ	9	72	545.8113241240543	1089.6080953149085	2	546.3121337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ITYKPLDLQ_	REV__ENSG00000182568|ENST00000338745|SATB1;REV__nc|ENSG00000182568|Q01826-2|SATB1	48.601550744091256	0.3193666407755445	6				NaN	NaN	0	NaN	10910	3773	14680
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14686	37.539	NaN	6093.3	30	0	1395.9	0.039	+			47546	VQYAIKNIFK	10	68	408.57614753798987	1222.7066132141697	3	408.5764465332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VQYAIKNIFK_	ENST00000559835.5_1_15:80412732-80412831:+|nuORF	50.033510581677724	0.4566913063131936	6				NaN	NaN	0	NaN	10911	3773	14680
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14687	37.54	NaN	6888.9	30	0	2050.3	0.139			+	25010	LLGGAGAGLLL	11	72	477.80218793605087	953.5898229389018	2	477.8026428222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LLGGAGAGLLL_	REV__ENSG00000163357|ENST00000295542|DCST1;REV__nc|ENSG00000163357|Q5T197-2|DCST1;REV__nc|ENSG00000163357|Q5T197-3|DCST1	50.0245360154114	0.4207767895280948	6				NaN	NaN	0	NaN	10912	3773	14680
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14703	37.575	NaN	12907	30	0	2289.1	0.214			+	-1	MMKYFKSEI	9	70	596.790962270147	1191.567371607094	2	596.7920532226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))MKYFKSEI_	REV__ENSG00000213923|ENST00000396832|CSNK1E	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	10925	3776	14702
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14704	37.579	NaN	19034	30	0	11763	0.106	+			41311	SVLNLVIVKK	10	73	371.58458804589895	1111.7319347378968	3	371.58477783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVLNLVIVKK_	ENSG00000137154|ENST00000380394|RPS6;ENST00000464444.1_1_19:13005132-13005321:+|nuORF	75.65223720490533	0.23114180991572172	6				NaN	NaN	0	NaN	10926	3776	14702
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14705	37.581	NaN	2709.6	30	0	267.29	0.106	+			11939	FVIDGSKSL	9	66	483.26761810425836	964.5206832753167	2	483.26837158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FVIDGSKSL_	ENSG00000132561|ENST00000254898|MATN2;nc|ENSG00000132561|O00339-2|MATN2;nc|ENSG00000132561|O00339-3|MATN2;nc|ENSG00000132561|O00339-4|MATN2	68.84614121027924	0.14577793175421136	6				NaN	NaN	0	NaN	10927	3776	14702
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14706	37.583	NaN	5393.8	30	0	795.31	0.106	+			26978	LYLKVKGNVF	10	58	394.24103200889897	1179.701266626897	3	394.24090576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LYLKVKGNVF_	ENSG00000108298|ENST00000225430|RPL19;ENST00000418154.1_1_1:64254543-64254969:-|nuORF;ENST00000429272.1_1_2:131051524-131051887:+|nuORF;ENST00000472309.1_1_4:179208113-179208287:+|nuORF;ENST00000498753.1_1_3:141762467-141763034:-|nuORF	44.377184641726394	0.5088115166961078	6				NaN	NaN	0	NaN	10928	3776	14702
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14707	37.584	NaN	3996.2	30	0	512.85	0.106	+			51331	YSMAVLKPGA	10	73	518.7773264239036	1035.540099914607	2	518.7786254882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YSMAVLKPGA_	ENST00000382496.9_1_5:9379939-9380047:-|nuORF	30.317721548370564	0.6322445173429027	6				NaN	NaN	0	NaN	10929	3776	14702
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14708	37.586	NaN	2555.8	30	0	259.76	0.035	+			24985	LLDVARTSL	9	68	494.2945923485936	986.5746317639872	2	494.2949523925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LLDVARTSL_	CCT6B|p.I274*|1|0.1|ENSG00000132141|chr17:34942549-34942549|T/-|frameshift_variant;ENSG00000132141|ENST00000314144|CCT6B;nc|ENSG00000132141|Q92526-2|CCT6B;nc|ENSG00000132141|Q92526-3|CCT6B	63.53385203322761	0.18415635464017938	6				NaN	NaN	0	NaN	10930	3776	14702
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14709	37.587	NaN	3692.5	30	0	379.9	0.144	+			25359	LPFYLHDLK	9	64	382.5492396037071	1144.6258894113214	3	382.5499267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LPFYLHDLK_	ENSG00000136367|ENST00000419474|ZFHX2	51.33545320467046	0.2872990594074956	6				NaN	NaN	0	NaN	10931	3776	14702
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14724	37.62	NaN	18662	30	0	7452	0.214	+			32492	QVPSSPSLLP	10	74	512.7862821876428	1023.5580114420856	2	513.287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QVPSSPSLLP_	WNK4|p.L778Sfs*157|1|0.58|ENSG00000126562|chr17:42794646-42794646|C/-|frameshift_variant	42.396135135203025	0.5270658956260207	6				NaN	NaN	0	NaN	10943	3779	14723
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14725	37.624	NaN	15635	30	0	5566.2	0.106			+	1238	AERIEKLI	8	83	486.29681804390793	970.5790831546159	2	486.2975769042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AERIEKLI_	REV__ENSG00000068366|ENST00000672401|ACSL4;REV__nc|ENSG00000068366|O60488|ACSL4	60.97194046774394	0.49215940876911696	6				NaN	NaN	0	NaN	10944	3779	14723
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14726	37.626	NaN	14508	30	0	5902.5	0.106	+			42117	SYLKDTKLW	9	74	385.2130440879517	1152.617302864055	3	385.21319580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SYLKDTKLW_	ENSG00000102572|ENST00000539966|STK24;nc|ENSG00000102572|Q9Y6E0|STK24	53.08895987439943	0.27122541748218487	6				NaN	NaN	0	NaN	10945	3779	14723
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14727	37.628	NaN	5134.3	30	0	964.78	0.106				-1	ANLGMIVL	8	55	423.74070676473474	845.4668605962695	2	423.740966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_ANLGM(Oxidation (M))IVL_	ENSG00000187612|ENST00000344514|OR5W2	57.452649787351945	0.526999880452039	6				NaN	NaN	0	NaN	10946	3779	14723
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14728	37.629	NaN	6855.7	30	0	455.53	0.106	+			42118	SYLKDTKLW	9	74	577.3160189954577	1152.6174850577154	2	577.31689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SYLKDTKLW_	ENSG00000102572|ENST00000539966|STK24;nc|ENSG00000102572|Q9Y6E0|STK24	131.115847015877	0.014647977962315902	6				NaN	NaN	0	NaN	10947	3779	14723
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14729	37.631	NaN	5667.9	30	0	730.74	0.035	+			42134	SYMPTVSHL	9	70	517.7518273836606	1033.4891018341211	2	517.7528686523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SYMPTVSHL_	ENSG00000168000|ENST00000360796|BSCL2;nc|ENSG00000168000|Q96G97-3|BSCL2;nc|ENSG00000168000|Q96G97|BSCL2	38.80614096846853	0.43426287593479557	6				NaN	NaN	0	NaN	10948	3779	14723
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14730	37.632	NaN	10537	30	0	1784.5	0.141	+			27925	MVANLLYEK	9	80	540.7899445284526	1079.565336123705	2	540.7914428710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MVANLLYEK_	ENSG00000277791|ENST00000619426|PSMB3	70.8162118820467	0.13725933411854815	6				NaN	NaN	0	NaN	10949	3779	14723
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14746	37.667	NaN	14139	30	0	1793.7	0.214	+			17639	IEKEGEFTL	9	79	533.2762291975959	1064.5379054619916	2	533.277099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IEKEGEFTL_	ENSG00000169189|ENST00000361439|NSMCE1;ENST00000565070.5_1_16:27237776-27268891:-|nuORF;ENST00000569236.5_1_16:27236480-27252833:-|nuORF	117.81106730687013	0.02252488733980868	6				NaN	NaN	0	NaN	10962	3782	14745
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14747	37.671	NaN	8998.4	30	0	3687.9	0.106	+			32641	QYVDFHNQL	9	84	582.2770158585631	1162.5394787839261	2	582.2780151367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QYVDFHNQL_	ENSG00000134899|ENST00000652225|ERCC5;nc|ENSG00000134899|P28715-2|ERCC5	84.9155231211612	0.07920012719736333	6				NaN	NaN	0	NaN	10963	3782	14745
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14748	37.673	NaN	9596	30	0	748.34	0.106			+	6898	CLRPHISL	8	85	469.7657438057557	937.5169346783114	2	469.7679443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_CLRPHISL_	REV__ENST00000573130.2_1_16:3104061-3104997:-|nuORF	55.50420428727701	0.5462892107279674	6				NaN	NaN	0	NaN	10964	3782	14745
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14749	37.674	NaN	7376.5	30	0	444.35	0.106	+			42924	TEIGPRMTL	9	82	509.27344290826403	NaN	0	509.27349853515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TEIGPRMTL_	ENSG00000130810|ENST00000253107|PPAN;nc|ENSG00000130810|Q9NQ55-2|PPAN;nc|ENSG00000130810|Q9NQ55-3|PPAN	62.107414245175825	0.1403307765918332	6				NaN	NaN	0	NaN	10965	3782	14745
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14750	37.676	NaN	3107.8	30	0	244.16	0.106				-1	 	0	59	503.2892165465435	1004.563880159887	2	503.2896423339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10966	3782	14745
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14751	37.678	NaN	24796	30	0	3240.6	0.035	+			49957	VYVVGTAHF	9	75	496.7631196546044	991.5116863760088	2	496.7633056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VYVVGTAHF_	ENSG00000170638|ENST00000380909|TRABD;ENST00000463233.1_1_22:50624392-50636456:+|nuORF;nc|ENSG00000170638|Q9H4I3-2|TRABD	180.49460243208492	0.0012463884455128954	6				NaN	NaN	0	NaN	10967	3782	14745
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14752	37.679	NaN	3490.9	30	0	626.22	0.139			+	42858	TEGKLLLGI	9	61	472.2943431318941	942.5741333305882	2	472.29437255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TEGKLLLGI_	REV__tr|U7T1Q1|U7T1Q1_FUSNUAutotransporterdomain-containingprotein(Fragment)OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00530PE=4SV=1	39.252832667884924	0.4290233611298554	6				NaN	NaN	0	NaN	10968	3782	14745
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14770	37.718	NaN	26657	30	0	3377	0.214	+			44010	TPIKDGILY	9	85	510.29178051341694	1018.5690080936339	2	510.292236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TPIKDGILY_	ENSG00000146094|ENST00000510898|DOK3;ENST00000502380.1_1_5:176936187-176937359:-|nuORF;ENST00000512660.1_1_5:176936187-176936779:-|nuORF;nc|ENSG00000146094|Q7L591-3|DOK3;nc|ENSG00000146094|Q7L591-4|DOK3;nc|ENSG00000146094|Q7L591|DOK3	80.45461616416974	0.09558281504443908	6				NaN	NaN	0	NaN	10983	3785	14769
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14771	37.722	NaN	18209	30	0	1556.2	0.106	+			6166	AVQGISGLPLK	11	87	541.8315603141695	1081.6485676951388	2	541.8323364257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVQGISGLPLK_	ENSG00000167721|ENST00000301364|TSR1	89.35639160576558	0.1014093944095153	6				NaN	NaN	0	NaN	10984	3785	14769
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14772	37.723	NaN	13748	30	0	5546.7	0.106	+			46033	VAYFTRVFQ	9	56	377.53770128126473	1129.5912744439943	3	377.53790283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VAYFTRVFQ_	ENSG00000178904|ENST00000392250|DPY19L3;ENST00000608291.1_1_19:32968395-32973143:+|nuORF	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	10985	3785	14769
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14773	37.725	NaN	8845.8	30	0	1605.8	0.106	+			47397	VPLKGIVSY	9	82	488.29698273338727	974.5794125335746	2	488.2972106933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VPLKGIVSY_	ENSG00000138078|ENST00000409411|PREPL;nc|ENSG00000138078|Q4J6C6-2|PREPL;nc|ENSG00000138078|Q4J6C6-3|PREPL;nc|ENSG00000138078|Q4J6C6|PREPL	106.68306549817024	0.032382560583716295	6				NaN	NaN	0	NaN	10986	3785	14769
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14774	37.727	NaN	4468.7	30	0	303.17	0.106	+			27588	MPKVHIEF	8	70	500.76749317252023	999.5204334118405	2	500.7679748535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MPKVHIEF_	ENSG00000115677|ENST00000310931|HDLBP;HDLBP|p.S551Kfs*2|1|0.11|ENSG00000115677|chr2:241248082-241248083|-/T|frameshift_variant;nc|ENSG00000115677|Q00341-2|HDLBP	54.776311868738084	0.5534952410049249	6				NaN	NaN	0	NaN	10987	3785	14769
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14775	37.729	NaN	3671.3	30	0	687.95	0.033	+			1521	AGALIGVLLG	10	57	442.2839139362571	882.5532749393142	2	442.2840270996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AGALIGVLLG_	ENSG00000019102|ENST00000326621|VSIG2;nc|ENSG00000019102|Q96IQ7-2|VSIG2	44.53106598305862	0.5073935772121767	6				NaN	NaN	0	NaN	10988	3785	14769
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14776	37.729	NaN	2360.7	30	0	201.2	0.142	+			39339	STCEAVMILR	10	63	590.2970437847121	1178.579534636224	2	590.2969360351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_STC(Carbamidomethyl (C))EAVMILR_	ENSG00000167081|ENST00000373489|PBX3;ENSG00000185630|ENST00000420696|PBX1;ENSG00000204304|ENST00000375050|PBX2;ENST00000478678.5_1_6:32154995-32157692:-|nuORF;ENST00000538998.1_1_9:128606084-128725334:+|nuORF;nc|ENSG00000167081|P40426-2|PBX3;nc|ENSG00000167081|P40426-3|PBX3;nc|ENSG00000167081|P40426-4|PBX3;nc|ENSG00000167081|P40426-5|PBX3;nc|ENSG00000185630|P40424-2|PBX1;nc|ENSG00000185630|P40424-3|PBX1	82.7504851949679	0.1731497355276012	6				NaN	NaN	0	NaN	10989	3785	14769
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14792	37.763	NaN	8033.6	30	0	1566	0.214				-1	 	0	69	444.74239093904293	887.4702289448859	2	444.7427978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11002	3788	14791
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14793	37.767	NaN	17157	30	0	1718.4	0.106	+			815	AEFVGVSHL	9	72	479.75289649755945	957.4912400619189	2	479.7536315917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEFVGVSHL_	ENSG00000141101|ENST00000268802|NOB1;ENST00000502915.1_1_4:139481866-139482694:+|nuORF	93.19546047674547	0.05585629608842056	6				NaN	NaN	0	NaN	11003	3788	14791
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14794	37.769	NaN	10644	30	0	1592.2	0.106			+	19108	IYKNVLNA	8	68	467.77101850775	933.5274840823	2	467.77154541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IYKNVLNA_	REV__ENSG00000070159|ENST00000374541|PTPN3;REV__nc|ENSG00000070159|P26045-2|PTPN3;REV__nc|ENSG00000070159|P26045-3|PTPN3;REV__PTPN3|p.A716T|1|0.11|ENSG00000070159|chr9:109389340-109389340|C/T|missense_variant	79.9392285194092	0.32408006123154964	6				NaN	NaN	0	NaN	11004	3788	14791
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14795	37.771	NaN	4462.8	30	0	866.13	0.106			+	7069	CVFRHLVCF	9	70	562.280742694518	1122.546932455836	2	562.281982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_CVFRHLVCF_	REV__ENST00000445957.2_1_1:190424055-190443630:-|nuORF	24.20275056022122	0.577060078256802	6				NaN	NaN	0	NaN	11005	3788	14791
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14796	37.772	NaN	7681.7	30	0	1161.2	0.106				-1	 	0	74	552.3023350119909	1102.5901170907816	2	552.3038940429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11006	3788	14791
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14797	37.774	NaN	1781.4	30	0	178.78	0.034	+			622	ADVIIHEI	8	52	455.2557749630521	NaN	0	455.2558898925781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ADVIIHEI_	ENSG00000176393|ENST00000295640|RNPEP;ENST00000471105.5_1_1:201965436-201974841:+|nuORF	45.9519527083369	1.7418937515398478	6				NaN	NaN	0	NaN	11007	3788	14791
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14798	37.775	NaN	3154.7	30	0	512.78	0.14				-1	GAAVFEHGVI	10	69	521.2713410459011	1040.528129158602	2	521.2720336914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))GAAVFEHGVI_	ENST00000457861.1_1_7:935511-935808:+|nuORF	27.882242232435846	0.6521336255503853	6				NaN	NaN	0	NaN	11008	3788	14791
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14816	37.814	NaN	6031.9	30	0	556.37	0.214	+			23261	KYITDVVKL	9	80	539.8286369359793	1077.6427209387584	2	539.8291625976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KYITDVVKL_	ENSG00000120800|ENST00000261637|UTP20;UTP20|p.A1865Sfs*12|1|0.08|ENSG00000120800|chr12:101356982-101356983|-/ATCCTTTAGTC|frameshift_variant	52.167168403610894	0.27890951017331667	6				NaN	NaN	0	NaN	11023	3791	14815
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14817	37.818	NaN	3251	30	0	461.66	0.106	+			9226	EGSPLGPLSGP	11	69	505.7609991263456	1009.5074453194912	2	505.761474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EGSPLGPLSGP_	ENST00000358055.7_2_2:220492239-220492678:+|nuORF	45.97224482568171	0.4762245054624163	6				NaN	NaN	0	NaN	11024	3791	14815
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14818	37.82	NaN	6776.8	30	0	464.68	0.106	+			1472	AFIQKSNLI	9	72	517.3049681628829	1032.5953833925657	2	517.3060302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AFIQKSNLI_	ENSG00000167635|ENST00000443387|ZNF146	112.10723106719422	0.02684780151337622	6				NaN	NaN	0	NaN	11025	3791	14815
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14819	37.822	NaN	3839.9	30	0	662.9	0.106	+			49763	VYPTAVHVL	9	62	499.7867973920839	997.5590418509678	2	499.7872314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VYPTAVHVL_	ENSG00000112234|ENST00000369244|FBXL4	33.51558372728122	0.4900267029546261	6				NaN	NaN	0	NaN	11026	3791	14815
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14820	37.823	NaN	6386.4	30	0	332.17	0.106			+	25403	LPKSVSLVSH	10	87	533.8170062077173	NaN	0	533.81689453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LPKSVSLVSH_	REV__ENST00000261168.8_1_12:14654270-14654414:+|nuORF	52.936696900407355	0.28703625529470256	6				NaN	NaN	0	NaN	11027	3791	14815
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14821	37.825	NaN	7955.4	30	0	1741.7	0.036	+			51098	YLSSLSRLL	9	72	526.3105157682741	1050.606478603348	2	526.3113403320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YLSSLSRLL_	ENSG00000176225|ENST00000640769|RTTN;ENST00000583043.5_1_18:67684852-67806940:-|nuORF;nc|ENSG00000176225|Q86VV8-3|RTTN	44.116797842482775	0.37197099687881774	6				NaN	NaN	0	NaN	11028	3791	14815
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14822	37.826	NaN	2588	30	0	347.02	0.14				-1	 	0	63	482.2785278706583	962.5425028081166	2	482.7767639160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11029	3791	14815
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14839	37.863	NaN	23609	30	0	12465	0.214				-1	 	0	60	348.23003103592265	1041.668263707968	3	348.23052978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11043	3794	14838
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14840	37.866	NaN	15807	30	0	2534.5	0.106	+			16274	HEGDIILKI	9	79	519.3028589801748	1036.5911650271496	2	519.303466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HEGDIILKI_	ENSG00000119139|ENST00000377245|TJP2;nc|ENSG00000119139|Q9UDY2-2|TJP2;nc|ENSG00000119139|Q9UDY2-3|TJP2;nc|ENSG00000119139|Q9UDY2-4|TJP2;nc|ENSG00000119139|Q9UDY2-5|TJP2;nc|ENSG00000119139|Q9UDY2-6|TJP2;nc|ENSG00000119139|Q9UDY2-7|TJP2;TJP2|p.F813Sfs*12|1|0.23|ENSG00000119139|chr9:69240013-69240013|T/-|frameshift_variant;TJP2|p.P484Qfs*30|1|0.18|ENSG00000119139|chr9:69228107-69228107|C/-|frameshift_variant;TJP2|p.T849Rfs*12|1|0.32|ENSG00000119139|chr9:69240120-69240120|A/-|frameshift_variant	148.6902309647307	0.00717441509122429	6				NaN	NaN	0	NaN	11044	3794	14838
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14841	37.868	NaN	24169	30	0	2541.6	0.106	+			32136	QSLPYHIY	8	88	510.7612348865741	1019.5079168399482	2	510.7611083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QSLPYHIY_	ENSG00000109929|ENST00000264027|SC5D	68.484700416344	0.4195245774506064	6				NaN	NaN	0	NaN	11045	3794	14838
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14842	37.87	NaN	10040	30	0	1172.5	0.106			+	26060	LSLPSHTM	8	61	443.2278196616888	884.4410863901776	2	443.22833251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSLPSHTM_	REV__ENST00000228799.6_1_12:2933460-2933670:+|nuORF	68.484700416344	0.4195245774506064	6				NaN	NaN	0	NaN	11046	3794	14838
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14843	37.872	NaN	12612	30	0	3154.5	0.106			+	7149	DAEIDLDDF	9	70	526.7248031377062	1051.4350533422123	2	526.7254638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DAEIDLDDF_	REV__ENSG00000077254|ENST00000370794|USP33;REV__nc|ENSG00000077254|Q8TEY7-3|USP33;REV__nc|ENSG00000077254|Q8TEY7|USP33;REV__USP33|p.I935Lfs*3|1|0.1|ENSG00000077254|chr1:77697343-77697343|T/-|frameshift_variant	55.50420428727701	0.2510918378945873	6				NaN	NaN	0	NaN	11047	3794	14838
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14844	37.874	NaN	6128.5	30	0	595.6	0.036			+	21828	KRFEVFPGK	9	76	554.3188250988137	1106.6230972644273	2	554.3197631835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KRFEVFPGK_	REV__ALG10B|p.A228V|1|0.15|ENSG00000175548|chr12:38320474-38320474|C/T|missense_variant	52.936696900407355	0.27249468807391813	6				NaN	NaN	0	NaN	11048	3794	14838
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14845	37.874	NaN	8826.4	30	0	764.47	0.14			+	2372	ANFLVVTGK	9	73	474.77861114551325	947.5426693578265	2	474.77911376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ANFLVVTGK_	REV__ENSG00000119227|ENST00000412723|PIGZ;REV__PIGZ|p.G423S|1|0.21|ENSG00000119227|chr3:196947630-196947630|C/T|missense_variant;REV__PIGZ|p.T490Lfs*10|1|0.26|ENSG00000119227|chr3:196947430-196947430|C/-|frameshift_variant	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	11049	3794	14838
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14863	37.914	NaN	46056	30	0	12299	0.214	+			44790	TTQLSLSFK	9	92	512.7862821876428	1023.5580114420856	2	512.7874755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTQLSLSFK_	ENSG00000198786|ENST00000361567|MT-ND5	139.38205640894643	0.01076996779551382	6				NaN	NaN	0	NaN	11064	3797	14862
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14864	37.918	NaN	30612	30	0	4028	0.106	+			7595	DISVATKLL	9	73	480.291823827253	958.569094721306	2	480.2919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DISVATKLL_	ANKRD26|p.K1234Nfs*19|2|0.18|ENSG00000107890|chr10:27033330-27033330|T/-|frameshift_variant;ANKRD26|p.K1452Rfs*7|1|0.29|ENSG00000107890|chr10:27017653-27017653|T/-|frameshift_variant;ANKRD26|p.N1518Ifs*14|1|0.04|ENSG00000107890|chr10:27014665-27014666|-/A|frameshift_variant;ANKRD26|p.N1518Lfs*11|1|0.04|ENSG00000107890|chr10:27014666-27014667|-/AGAATCATAGGAAATAA|frameshift_variant;ANKRD26|p.N1659Kfs*4|1|0.3|ENSG00000107890|chr10:27006939-27006940|-/T|frameshift_variant;ANKRD26|p.N447Kfs*5|1|0.23|ENSG00000107890|chr10:27064010-27064011|-/T|frameshift_variant;ANKRD26|p.Y1555Ifs*2|1|0.28|ENSG00000107890|chr10:27014555-27014556|-/T|frameshift_variant;ENSG00000107890|ENST00000376087|ANKRD26	72.87924865735499	0.12833875048249987	6				NaN	NaN	0	NaN	11065	3797	14862
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14865	37.919	NaN	55401	30	0	10536	0.106				-1	 	0	87	482.2785278706583	962.5425028081166	2	482.2789306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11066	3797	14862
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14866	37.921	NaN	7039.8	30	0	671.01	0.106	+			12643	GEIKGFTGI	9	63	461.25520812159516	920.4958633099903	2	461.2554931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEIKGFTGI_	ENSG00000138801|ENST00000265174|PAPSS1;ENSG00000198682|ENST00000456849|PAPSS2;nc|ENSG00000198682|O95340|PAPSS2	82.7504851949679	0.08565546331141553	6				NaN	NaN	0	NaN	11067	3797	14862
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14867	37.923	NaN	9580.6	30	0	3851.4	0.106	+			26863	LWAEKNLK	8	74	501.29152766359243	1000.5685023939849	2	501.291748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LWAEKNLK_	TBC1D5|p.F566Lfs*23|1|0.22|ENSG00000131374|chr3:17214261-17214261|A/-|frameshift_variant	63.30626980617807	0.4690498839812213	6				NaN	NaN	0	NaN	11068	3797	14862
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14868	37.925	NaN	4084.1	30	0	838.33	0.106	+			42566	TASGVFSKF	9	59	472.24716211507877	942.4797712969576	2	472.2471618652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TASGVFSKF_	ENSG00000105486|ENST00000263274|LIG1;nc|ENSG00000105486|P18858-2|LIG1;nc|ENSG00000105486|P18858-3|LIG1	90.60085204095205	0.06317133949006545	6				NaN	NaN	0	NaN	11069	3797	14862
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14869	37.927	NaN	3953.7	30	0	882.53	0.035	+			39290	STASFIFSK	9	70	494.2605909030167	986.5066288728334	2	494.2607727050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STASFIFSK_	ENSG00000162522|ENST00000401073|KIAA1522;nc|ENSG00000162522|Q9P206-3|NHSL3;nc|ENSG00000162522|Q9P206|NHSL3	77.31757898189308	0.1091473830098891	6				NaN	NaN	0	NaN	11070	3797	14862
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14882	37.954	NaN	10313	30	0	2597	0.214	+			4198	ATFTGILGK	9	62	454.2655182073076	906.5164834814152	2	454.26605224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATFTGILGK_	ENST00000534553.5_1_11:61722629-61730618:+|nuORF;nc|ENSG00000167995|O76090-3|BEST1	118.74307786436346	0.02196067127630568	6				NaN	NaN	0	NaN	11080	3800	14881
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14883	37.958	NaN	11530	30	0	2245.9	0.106			+	17824	IEYHLLTY	8	75	526.2755718445031	1050.5365907558062	2	526.2759399414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IEYHLLTY_	REV__tr|U7SE86|U7SE86_FUSNUCRISPR-associatedendonucleaseCas1OS=FusobacteriumnucleatumCTI-5OX=1316586GN=cas1PE=3SV=1	42.47446043378293	0.6409579893742323	6				NaN	NaN	0	NaN	11081	3800	14881
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14884	37.959	NaN	7082.8	30	0	627.99	0.106			+	47370	VPGSTPKLSF	10	77	516.7918447626174	1031.5691365920347	2	516.792236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VPGSTPKLSF_	REV__ENSG00000112299|ENST00000367928|VNN1	56.72105179125745	0.3956618550748046	6				NaN	NaN	0	NaN	11082	3800	14881
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14885	37.961	NaN	3736.5	30	0	701.47	0.106	+			30949	QEMLNVHNL	9	75	549.2721014019904	1096.5296498707808	2	549.274169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QEMLNVHNL_	ALG8|p.R122Lfs*35|1|0.22|ENSG00000159063|chr11:78124024-78124024|C/-|frameshift_variant;ALG8|p.V133Wfs*24|3|0.31|ENSG00000159063|chr11:78121147-78121147|T/-|frameshift_variant;ENSG00000159063|ENST00000299626|ALG8;nc|ENSG00000159063|Q9BVK2-2|ALG8	52.936696900407355	0.27249468807391813	6				NaN	NaN	0	NaN	11083	3800	14881
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14886	37.963	NaN	2220.7	30	0	116	0.106	+			50910	YGGSGNGYNDF	11	73	575.7251210087971	1149.4356890843942	2	575.7264404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YGGSGNGYNDF_	ENST00000560893.1_1_15:35693406-35693832:+|nuORF	70.39856735676683	0.2324169829117963	6				NaN	NaN	0	NaN	11084	3800	14881
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14887	37.965	NaN	3672.4	30	0	467.02	0.037	+			18341	IQDSNQYQF	9	73	571.7589204094683	1141.5032878857364	2	571.7593994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IQDSNQYQF_	ENSG00000128833|ENST00000261839|MYO5C;ENST00000558902.5_1_15:52529812-52548856:-|nuORF;ENST00000560809.5_1_15:52532054-52548856:-|nuORF;MYO5C|p.E1050Sfs*8|1|0.32|ENSG00000128833|chr15:52229192-52229192|C/-|frameshift_variant;MYO5C|p.L1151Wfs*19|1|0.17|ENSG00000128833|chr15:52223719-52223719|A/-|frameshift_variant;MYO5C|p.L933Hfs*33|1|0.04|ENSG00000128833|chr15:52237552-52237553|-/T|frameshift_variant;MYO5C|p.L933Sfs*35|1|0.04|ENSG00000128833|chr15:52237553-52237554|-/AAGTGGA|frameshift_variant	101.60071028292904	0.0375685401170269	6				NaN	NaN	0	NaN	11085	3800	14881
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14888	37.966	NaN	2464.4	30	0	217.84	0.14			+	38642	SSHVTYSL	8	52	447.2214945542819	892.4284361753638	2	447.2217102050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSHVTYSL_	REV__ENSG00000165323|ENST00000525166|FAT3;REV__FAT3|p.N1793Kfs*14|1|0.21|ENSG00000165323|chr11:92798835-92798836|-/A|frameshift_variant;REV__FAT3|p.P4078Rfs*36|1|0.42|ENSG00000165323|chr11:92883135-92883135|C/-|frameshift_variant;REV__FAT3|p.V1884Sfs*21|1|0.26|ENSG00000165323|chr11:92799110-92799110|G/-|frameshift_variant;REV__FAT3|p.V4082Rfs*13|1|0.23|ENSG00000165323|chr11:92883145-92883146|-/C|frameshift_variant;REV__FAT3|p.V4210Cfs*6|1|0.05|ENSG00000165323|chr11:92889212-92889213|-/T|frameshift_variant;REV__nc|ENSG00000165323|Q8TDW7|FAT3	42.47446043378293	0.6409579893742323	6				NaN	NaN	0	NaN	11086	3800	14881
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14903	37.999	NaN	8752.3	30	0	1036.7	0.214	+			17009	HPTIISESF	9	72	515.762933174127	1029.511313415054	2	515.7640991210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HPTIISESF_	CCT4|p.T490Lfs*30|1|0.4|ENSG00000115484|chr2:61872105-61872105|T/-|frameshift_variant;ENSG00000115484|ENST00000394440|CCT4;nc|ENSG00000115484|P50991-2|CCT4	94.00642277110589	0.05356993013874309	6				NaN	NaN	0	NaN	11098	3803	14902
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14904	38.002	NaN	31056	30	0	3933.6	0.106				-1	 	0	93	600.2889250623906	1198.5632971915811	2	600.2906494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11099	3803	14902
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14905	38.004	NaN	5233.9	30	0	771.51	0.106	+			36362	SETAKVFSI	9	76	491.2666276296488	980.5187023260976	2	491.2663269042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SETAKVFSI_	ENSG00000164171|ENST00000296585|ITGA2	68.84614121027924	0.14577793175421136	6				NaN	NaN	0	NaN	11100	3803	14902
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14906	38.006	NaN	3960.4	30	0	317.95	0.106	+			44251	TSAAIYHVL	9	73	487.7680610531035	973.521569173007	2	487.76849365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TSAAIYHVL_	ENSG00000134910|ENST00000392708|STT3A;ENST00000534472.5_1_11:125465789-125479519:+|nuORF;nc|ENSG00000134910|P46977-2|STT3A;STT3A|p.F106Sfs*45|2|0.41|ENSG00000134910|chr11:125602843-125602843|T/-|frameshift_variant	113.41158876095287	0.025516849225023126	6				NaN	NaN	0	NaN	11101	3803	14902
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14907	38.008	NaN	2670	30	0	356.01	0.106	+			643	AEADKIYSF	9	68	522.2568574660485	1042.4991619988969	2	522.2569580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEADKIYSF_	ENSG00000180357|ENST00000326648|ZNF609;ZNF609|p.P882Lfs*30|1|0.33|ENSG00000180357|chr15:64675495-64675495|C/-|frameshift_variant	63.53385203322761	0.18415635464017938	6				NaN	NaN	0	NaN	11102	3803	14902
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14908	38.01	NaN	9532.4	30	0	2068.9	0.034	+			469	AAVPRAAFL	9	71	458.2737276377219	914.5329023422438	2	458.27392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AAVPRAAFL_	ENSG00000089248|ENST00000261735|ERP29;ENST00000553161.1_1_12:112451251-112452397:+|nuORF;nc|ENSG00000089248|P30040-2|ERP29	47.91560031466742	0.327412564698279	6				NaN	NaN	0	NaN	11103	3803	14902
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14909	38.01	NaN	4910.5	30	0	343.75	0.14	+			18296	IPPAFNNYA	9	72	503.752945792965	1005.4913386527301	2	503.7532958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IPPAFNNYA_	ENST00000556408.5_1_14:71996071-72040486:+|nuORF	47.91560031466742	0.327412564698279	6				NaN	NaN	0	NaN	11104	3803	14902
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14927	38.049	NaN	37736	30	0	6160	0.214	+			7264	DALVITHY	8	82	466.2473419438625	930.4801309545251	2	466.2475891113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DALVITHY_	ENSG00000109917|ENST00000227322|ZPR1	148.20599733432147	0.2406086923697642	6				NaN	NaN	0	NaN	11119	3806	14926
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14928	38.052	NaN	11912	30	0	2145.1	0.106	+			4206	ATFTNVFGK	9	69	492.76060887598385	983.5066648187677	2	492.76092529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATFTNVFGK_	ENSG00000131503|ENST00000360839|ANKHD1;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	136.26810882979174	0.012230845423532208	6				NaN	NaN	0	NaN	11120	3806	14926
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14929	38.054	NaN	4901.2	30	0	1225.3	0.106	+			40990	SVGMYLISK	9	67	499.2722024812125	996.529852029225	2	499.2725830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVGMYLISK_	ENSG00000070669|ENST00000394308|ASNS;ENST00000462436.1_1_7:97484616-97487685:-|nuORF;nc|ENSG00000070669|P08243-2|ASNS;nc|ENSG00000070669|P08243-3|ASNS;TRRAP-ASNS|1|fusion;TRRAP-ASNS|2|fusion	120.8684288430529	0.02067403653475984	6				NaN	NaN	0	NaN	11121	3806	14926
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14930	38.056	NaN	3772.9	30	0	217.15	0.106			+	6839	CIKQDSYI	8	66	485.23866003081577	968.4627671284316	2	485.23883056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_CIKQDSYI_	REV__ENSG00000162402|ENST00000294383|USP24;REV__USP24|p.D1814G|1|0.09|ENSG00000162402|chr1:55098488-55098488|T/C|missense_variant	29.14955571784316	0.7342621283720113	6				NaN	NaN	0	NaN	11122	3806	14926
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14931	38.058	NaN	5031.4	30	0	514.24	0.106	+			8142	EAAAVFKTL	9	66	475.27009840046446	948.525643867729	2	475.2711181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EAAAVFKTL_	ENSG00000138686|ENST00000264499|BBS7;ENST00000502444.1_1_4:122782546-122791468:-|nuORF;nc|ENSG00000138686|Q8IWZ6-2|BBS7	70.8162118820467	0.13725933411854815	6				NaN	NaN	0	NaN	11123	3806	14926
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14932	38.06	NaN	2339.2	30	0	231.77	0.034	+			2496	APSPVLQLP	9	64	461.27392578125	NaN	0	461.27392578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_APSPVLQLP_	ENST00000456585.5_1_6:168397599-168397749:-|nuORF	51.33545320467046	0.19748963086191895	6				NaN	NaN	0	NaN	11124	3806	14926
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14933	38.06	NaN	2910.9	30	0	732.99	0.143	+			46870	VILIVRPPF	9	43	351.89830969126774	1052.6730996740032	3	352.2329406738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VILIVRPPF_	ENSG00000176273|ENST00000427197|SLC35G1;nc|ENSG00000176273|Q2M3R5-2|SLC35G1;SLC35G1|p.S209Kfs*34|1|0.05|ENSG00000176273|chr10:93901016-93901017|-/AAGCATAG|frameshift_variant	21.9598887501803	0.5980208138527809	6				NaN	NaN	0	NaN	11125	3806	14926
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14951	38.097	NaN	32496	30	0	7309.5	0.214				-1	 	0	71	555.7960741688008	1109.5775954044016	2	555.7969970703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11140	3809	14950
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14952	38.101	NaN	9605.6	30	0	1773	0.037	+			29227	NVYDFKTTY	9	77	575.7737172736307	1149.5328816140614	2	576.2763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NVYDFKTTY_	ENSG00000160075|ENST00000291386|SSU72;ENST00000378725.3_1_1:1480120-1509937:-|nuORF;nc|ENSG00000160075|Q9NP77-2|SSU72;SSU72|p.L82Ffs*8|1|0.34|ENSG00000160075|chr1:1544981-1544982|-/A|frameshift_variant	109.43880257439609	0.029570636687953285	6				NaN	NaN	0	NaN	11141	3809	14950
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14970	38.136	NaN	163070	30	0	17167	0.196				-1	 	0	102	521.3054979399781	1040.596442946756	2	521.306396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11156	3812	14969
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14971	38.14	NaN	19016	30	0	3071.1	0.106	+			47276	VMTGSYNNF	9	81	516.7256550841433	1031.4367572350866	2	516.7264404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VMTGSYNNF_	ABHD12-PPP2R2A|1|fusion;ENSG00000221914|ENST00000380737|PPP2R2A;ENST00000517754.1_1_8:26221160-26227926:+|nuORF;nc|ENSG00000221914|P63151-2|PPP2R2A	115.49404669440601	0.023927554121326553	6				NaN	NaN	0	NaN	11157	3812	14969
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14972	38.142	NaN	19596	30	0	3211.6	0.106	+			25486	LPSEIEVKY	9	78	539.2943540122747	1076.5741550913492	2	539.2954711914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LPSEIEVKY_	ANAPC7|p.K150Nfs*22|1|0.27|ENSG00000196510|chr12:110395161-110395161|T/-|frameshift_variant;ENSG00000196510|ENST00000455511|ANAPC7;ENST00000464697.1_1_12:110825679-110841468:-|nuORF;ENST00000550231.1_1_12:110825542-110834223:-|nuORF;nc|ENSG00000196510|Q9UJX3-2|ANAPC7	115.49404669440601	0.023927554121326553	6				NaN	NaN	0	NaN	11158	3812	14969
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14973	38.144	NaN	16551	30	0	2924.2	0.106	+			10710	FAALHGPAL	9	66	448.7523883715658	895.4902238099316	2	448.7529602050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FAALHGPAL_	ENSG00000100304|ENST00000216129|TTLL12	152.83388479725383	0.0062085958170788325	6				NaN	NaN	0	NaN	11159	3812	14969
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14974	38.145	NaN	12726	30	0	785.44	0.106	+			8287	EAIGAVIHY	9	81	486.76060215122834	NaN	0	486.76043701171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EAIGAVIHY_	ENSG00000020129|ENST00000373243|NCDN;nc|ENSG00000020129|Q9UBB6-2|NCDN	90.93900077235594	0.039703509844767775	6				NaN	NaN	0	NaN	11160	3812	14969
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14975	38.147	NaN	8163.2	30	0	2257.2	0.106	+			14454	GTAYGFFGK	9	61	474.23442780666136	946.4543026801227	2	474.2348937988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTAYGFFGK_	ENST00000580048.1_1_18:72264114-72264453:-|nuORF	101.60071028292904	0.0375685401170269	6				NaN	NaN	0	NaN	11161	3812	14969
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14976	38.149	NaN	4905	30	0	604.35	0.033				-1	 	0	63	444.77300348859615	887.5314540439923	2	444.77337646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11162	3812	14969
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14991	38.18	NaN	16781	30	0	2027.9	0.214	+			33068	REKIVEVMF	9	86	575.8171618031577	1149.6197706731152	2	575.8182373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_REKIVEVMF_	ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2	46.45678178249821	0.34452392205506005	6				NaN	NaN	0	NaN	11174	3815	14990
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14992	38.183	NaN	13258	30	0	1232.9	0.106				-1	 	0	80	485.7994808362308	969.5844087392617	2	485.7999267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11175	3815	14990
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14993	38.185	NaN	7479.3	30	0	1407.4	0.106				-1	 	0	65	471.30460125993267	940.5946495866654	2	471.30487060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11176	3815	14990
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14994	38.187	NaN	7932.5	30	0	550.14	0.106	+			38555	SSFELIVQK	9	75	525.794165122794	1049.5737773123878	2	525.79541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSFELIVQK_	ENSG00000108424|ENST00000290158|KPNB1;nc|ENSG00000108424|Q14974-2|KPNB1	127.46168284122857	0.016682644177004526	6				NaN	NaN	0	NaN	11177	3815	14990
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14995	38.189	NaN	1598	30	0	138.65	0.106	+			47056	VLGDINYI	8	45	453.7519836425781	NaN	0	453.7519836425781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VLGDINYI_	tr|U7SNT9|U7SNT9_FUSNUPglDN-terminaldomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01948PE=4SV=1	31.954861631926434	1.7418937515398478	6				NaN	NaN	0	NaN	11178	3815	14990
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14996	38.191	NaN	3829.9	30	0	1656.1	0.038			+	43801	TLLSVSCFLK	10	49	389.88512247977246	1166.6335380395174	3	389.8849182128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_TLLSVSC(Carbamidomethyl (C))FLK_	REV__AMMECR1L|p.K259Nfs*9|1|0.08|ENSG00000144233|chr2:127866913-127866944|TCGTTTTTCTGAATTCACTGGTAATTGGAGCT/-|frameshift_variant;REV__ENSG00000144233|ENST00000272647|AMMECR1L	41.42661286455405	0.5359995577334734	6				NaN	NaN	0	NaN	11179	3815	14990
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14997	38.191	NaN	3864.7	30	0	359.65	0.14	+			11811	FSSSVNSKF	9	65	501.746435231944	1001.4783175306881	2	501.7475891113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FSSSVNSKF_	ENSG00000178163|ENST00000326756|ZNF518B;ZNF518B|p.T403Nfs*7|1|0.39|ENSG00000178163|chr4:10445121-10445122|-/T|frameshift_variant	60.97194046774394	0.20551255781574032	6				NaN	NaN	0	NaN	11180	3815	14990
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15014	38.228	NaN	4590.3	30	0	780.01	0.214			+	18517	ISKPAFVVQ	9	63	494.79595868633686	987.5773644394737	2	494.7964782714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ISKPAFVVQ_	REV__ENSG00000135519|ENST00000257981|KCNH3;REV__KCNH3|p.M812Cfs*9|1|0.13|ENSG00000135519|chr12:49555911-49555911|C/-|frameshift_variant;REV__KCNH3|p.W987Gfs*47|1|0.28|ENSG00000135519|chr12:49557655-49557655|C/-|frameshift_variant	80.45461616416974	0.09558281504443908	6				NaN	NaN	0	NaN	11194	3818	15013
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15015	38.232	NaN	7234	30	0	759.9	0.106	+			9784	ENSKEADIL	9	73	509.75497480766455	1017.4953966821291	2	510.262451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ENSKEADIL_	CPOX|p.E441D|1|0.12|ENSG00000080819|chr3:98580725-98580725|T/G|missense_variant	56.43379154798735	0.2433427591689151	6				NaN	NaN	0	NaN	11195	3818	15013
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15016	38.234	NaN	3688	30	0	809.27	0.106			+	-1	LSTDPRLCNT	10	54	392.86067674535525	1175.5602008362657	3	392.8608703613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LSTDPRLC(Carbamidomethyl (C))NT_	REV__ENSG00000079841|ENST00000521978|RIMS1;REV__ENST00000524197.1_1_6:72926891-72975792:+|nuORF;REV__nc|ENSG00000079841|Q86UR5-10|RIMS1;REV__nc|ENSG00000079841|Q86UR5-12|RIMS1;REV__nc|ENSG00000079841|Q86UR5-13|RIMS1;REV__nc|ENSG00000079841|Q86UR5-3|RIMS1;REV__nc|ENSG00000079841|Q86UR5-4|RIMS1;REV__nc|ENSG00000079841|Q86UR5-6|RIMS1;REV__nc|ENSG00000079841|Q86UR5-7|RIMS1;REV__nc|ENSG00000079841|Q86UR5-9|RIMS1	29.550750289552195	0.6385079145554603	6				NaN	NaN	0	NaN	11196	3818	15013
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15017	38.236	NaN	3540.3	30	0	399.41	0.106			+	24028	LEEPGRAALL	10	71	534.8055437164851	1067.59653449977	2	534.8065795898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LEEPGRAALL_	REV__ENSG00000187266|ENST00000222139|EPOR;REV__ENST00000588681.5_1_19:11493771-11494883:-|nuORF;REV__ENST00000589402.1_1_19:11493771-11494125:-|nuORF;REV__nc|ENSG00000187266|P19235-2|EPOR;REV__nc|ENSG00000187266|P19235-3|EPOR	45.97224482568171	0.49411383603842696	6				NaN	NaN	0	NaN	11197	3818	15013
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15018	38.237	NaN	4210.3	30	0	804.89	0.106	+			32600	QYLEEAPKF	9	71	562.7848040978387	1123.5550552624773	2	562.7852783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QYLEEAPKF_	ENSG00000007255|ENST00000585934|TRAPPC6A;nc|ENSG00000007255|O75865-2|TRAPPC6A	69.6276240434122	0.14239879520340665	6				NaN	NaN	0	NaN	11198	3818	15013
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15019	38.239	NaN	3411.6	30	0	760.14	0.035	+			12020	FWPVGIAAF	9	62	504.27077423651883	1006.5269955398377	2	504.27020263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FWPVGIAAF_	ENSG00000142046|ENST00000392002|TMEM91;nc|ENSG00000142046|Q6ZNR0-2|TMEM91;nc|ENSG00000142046|Q6ZNR0-3|TMEM91;nc|ENSG00000142046|Q6ZNR0-4|TMEM91;nc|ENSG00000142046|Q6ZNR0-5|TMEM91	39.021493756699265	0.43173687394350213	6				NaN	NaN	0	NaN	11199	3818	15013
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15020	38.24	NaN	1968.3	30	0	166.48	0.143	+			27934	MVENYPTALR	10	74	597.3022378868537	NaN	0	597.3023071289062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MVENYPTALR_	ENSG00000204052|ENST00000372441|LRRC73	47.227680397652996	0.32312948777114064	6				NaN	NaN	0	NaN	11200	3818	15013
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15037	38.277	NaN	17496	30	0	7926.3	0.214	+			25497	LPSETIQTY	9	81	526.2692125690196	1050.523872204839	2	526.269287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LPSETIQTY_	ENSG00000172086|ENST00000347055|KRCC1	54.776311868738084	0.25715957988447635	6				NaN	NaN	0	NaN	11214	3821	15036
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15038	38.28	NaN	11992	30	0	730.42	0.106			+	6641	AYVGAGGLLF	10	83	484.2663977202127	966.5182425072254	2	484.26715087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AYVGAGGLLF_	REV__ENSG00000147036|ENST00000378619|LANCL3;REV__nc|ENSG00000147036|Q6ZV70-2|LANCL3	44.53106598305862	0.5073935772121767	6				NaN	NaN	0	NaN	11215	3821	15036
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15039	38.282	NaN	16419	30	0	3016	0.106	+			46654	VGDPSVHLL	9	73	468.7606941653446	935.5068353974892	2	468.7607116699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VGDPSVHLL_	ENSG00000099364|ENST00000338343|FBXL19;nc|ENSG00000099364|Q6PCT2-2|FBXL19;nc|ENSG00000099364|Q6PCT2-3|FBXL19;nc|ENSG00000099364|Q6PCT2|FBXL19	90.77665401227738	0.06267569666681755	6				NaN	NaN	0	NaN	11216	3821	15036
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15040	38.284	NaN	8427.6	30	0	1036.8	0.106			+	42742	TDKTIDVII	9	79	509.2938366956637	1016.5731204581274	2	509.2947082519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TDKTIDVII_	REV__ENSG00000177628|ENST00000368373|GBA1;REV__ENST00000478472.1_1_1:155205470-155206203:-|nuORF;REV__nc|ENSG00000177628|P04062-2|GBA1;REV__nc|ENSG00000177628|P04062-4|GBA1;REV__nc|ENSG00000177628|P04062-5|GBA1	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	11217	3821	15036
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15041	38.286	NaN	5957.3	30	0	431.23	0.106	+			29306	NYNEKIYEL	9	84	593.2908128165495	1184.567072699899	2	593.2924194335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NYNEKIYEL_	ENSG00000070010|ENST00000263202|UFD1;ENST00000459854.5_1_22:19442175-19463025:-|nuORF;ENST00000466373.1_1_22:19439515-19452862:-|nuORF;nc|ENSG00000070010|Q92890-1|UFD1;nc|ENSG00000070010|Q92890-3|UFD1	99.01295224348159	0.040209060045561164	6				NaN	NaN	0	NaN	11218	3821	15036
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15042	38.288	NaN	6646.7	30	0	1226.8	0.037	+			40863	SVFEDPVISK	10	66	560.7973122906857	1119.5800716481713	2	560.7979736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVFEDPVISK_	ENSG00000125445|ENST00000245539|MRPS7;MRPS7|p.L162Pfs*29|1|0.05|ENSG00000125445|chr17:75263482-75263483|-/C|frameshift_variant	79.48907831485694	0.19979514868675113	6				NaN	NaN	0	NaN	11219	3821	15036
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15043	38.288	NaN	14130	30	0	8411.8	0.145				-1	LLSKFGSLAH	10	66	372.213040639078	1113.617292517434	3	372.213134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LLSKFGSLAH_	ENSG00000198355|ENST00000360612|PIM3	56.72105179125745	0.3956618550748046	6				NaN	NaN	0	NaN	11220	3821	15036
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15061	38.328	NaN	11344	30	0	1386.1	0.214	+			23268	KYKGIFNGF	9	83	537.2919129110769	1072.5692728889537	2	537.2928466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KYKGIFNGF_	ENSG00000075415|ENST00000552981|SLC25A3;ENST00000546766.5_1_12:98989476-98995303:+|nuORF;ENST00000547908.1_1_12:98989476-98991822:+|nuORF;ENST00000551123.5_1_12:98989412-98995303:+|nuORF;nc|ENSG00000075415|Q00325|SLC25A3;SLC25A3|p.A215Hfs*11|1|0.42|ENSG00000075415|chr12:98598698-98598698|A/-|frameshift_variant	87.75429964447693	0.0711966946989736	6				NaN	NaN	0	NaN	11235	3824	15060
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15062	38.331	NaN	5473	30	0	797.33	0.106	+			32882	RDIPPLTAP	9	60	490.2814245936482	978.5482962540964	2	490.281982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RDIPPLTAP_	ENSG00000137770|ENST00000260327|CTDSPL2	56.72105179125745	0.24094814563026265	6				NaN	NaN	0	NaN	11236	3824	15060
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15063	38.333	NaN	7080.7	30	0	994.19	0.106			+	27427	MLCLQPSLN	9	77	509.75497480766455	1017.4953966821291	2	509.7547912597656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MLCLQPSLN_	REV__ENSG00000243649|ENST00000425368|CFB;REV__ENST00000472581.1_1_6:31913911-31914451:+|nuORF;REV__nc|ENSG00000243649|P00751-2|CFB	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	11237	3824	15060
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15064	38.335	NaN	8573.9	30	0	1197.6	0.106	+			50867	YFAERVTSL	9	70	543.2847891485917	1084.5550253639833	2	543.2852172851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YFAERVTSL_	ENSG00000213145|ENST00000392531|CRIP1	126.24258497203832	0.01742065577488747	6				NaN	NaN	0	NaN	11238	3824	15060
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15065	38.337	NaN	6743.4	30	0	2436.6	0.106			+	36745	SHALLRRPN	9	72	532.3102307506606	1062.605908568121	2	532.3113403320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SHALLRRPN_	REV__ENST00000473013.1_1_17:18064529-18067169:+|nuORF	38.80614096846853	0.43426287593479557	6				NaN	NaN	0	NaN	11239	3824	15060
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15066	38.339	NaN	4140.4	30	0	503.58	0.034			+	585	ADLAPPHPL	9	71	465.75514164177815	929.4957303503563	2	465.7555847167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ADLAPPHPL_	REV__ENST00000372004.7_1_20:46283286-46283376:+|nuORF	31.954861631926434	0.5046124803899898	6				NaN	NaN	0	NaN	11240	3824	15060
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15067	38.339	NaN	5040.5	30	0	297.04	0.141	+			29251	NYADQISRL	9	81	540.2773234290669	1078.5400939249337	2	540.278076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NYADQISRL_	ENSG00000008294|ENST00000262013|SPAG9;ENSG00000138834|ENST00000610761|MAPK8IP3;ENST00000514613.5_1_17:49067015-49156972:-|nuORF;nc|ENSG00000008294|O60271-2|SPAG9;nc|ENSG00000008294|O60271-3|SPAG9;nc|ENSG00000008294|O60271-4|SPAG9;nc|ENSG00000008294|O60271-5|SPAG9;nc|ENSG00000138834|Q9UPT6-2|MAPK8IP3;nc|ENSG00000138834|Q9UPT6|MAPK8IP3;SPAG9|p.N750Ifs*8|1|0.15|ENSG00000008294|chr17:50993913-50993913|T/-|frameshift_variant;SPAG9|p.R484Kfs*7|1|0.28|ENSG00000008294|chr17:51005237-51005238|-/T|frameshift_variant	91.26522074875469	0.06129826844580791	6				NaN	NaN	0	NaN	11241	3824	15060
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15084	38.376	NaN	64259	30	0	7587	0.19				-1	 	0	91	600.2889250623906	1198.5632971915811	2	600.2901000976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11255	3827	15083
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15085	38.38	NaN	16018	30	0	4923.8	0.106	+			15207	GTSSLFIYK	9	80	508.2754556384296	1014.5363583436592	2	508.27655029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTSSLFIYK_	BBS10|p.K620Nfs*12|1|0.5|ENSG00000179941|chr12:76346125-76346125|T/-|frameshift_variant;ENSG00000179941|ENST00000650064|BBS10	87.69643885390035	0.07135982304947239	6				NaN	NaN	0	NaN	11256	3827	15083
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15086	38.381	NaN	10765	30	0	1369.6	0.106	+			28107	NAFKEITTM	9	78	527.7637754118524	1053.5129978905047	2	527.7660522460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NAFKEITTM_	ENSG00000137947|ENST00000370500|GTF2B;ENST00000486078.1_1_1:89325774-89329699:-|nuORF;ENST00000494819.5_1_1:89324456-89357188:-|nuORF	158.07458414430337	0.004987072822166904	6				NaN	NaN	0	NaN	11257	3827	15083
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15087	38.383	NaN	9959.1	30	0	3654.9	0.106	+			46612	VFTPVVQRI	9	73	529.821166617473	1057.6277803017458	2	529.8217163085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VFTPVVQRI_	ENSG00000153815|ENST00000537098|CMIP;nc|ENSG00000153815|Q8IY22-2|CMIP;nc|ENSG00000153815|Q8IY22-3|CMIP	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	11258	3827	15083
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15088	38.385	NaN	9690.7	30	0	1442.7	0.106	+			15832	GWDPGVLGQI	10	71	521.2713410459011	1040.528129158602	2	521.2723388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GWDPGVLGQI_	CCDC17|p.R259W|1|0.3|ENSG00000159588|chr1:45622633-45622633|G/A|missense_variant	71.87747018426188	0.26198133118427214	6				NaN	NaN	0	NaN	11259	3827	15083
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15089	38.387	NaN	5971.7	30	0	861.08	0.106			+	8222	EAEKVFAVL	9	66	503.2866109047792	1004.5586688763584	2	503.2876892089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EAEKVFAVL_	REV__ENSG00000223501|ENST00000445902|VPS52;REV__nc|ENSG00000223501|Q8N1B4-2|VPS52	47.95952297671804	0.32689736945648856	6				NaN	NaN	0	NaN	11260	3827	15083
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15090	38.389	NaN	8083.2	30	0	845.8	0.035	+			45785	VAGKFPQGPS	10	71	494.2660972047088	NaN	0	494.2662658691406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VAGKFPQGPS_	ENSG00000248713|ENST00000511828|C4orf54	53.08895987439943	0.2860736266326207	6				NaN	NaN	0	NaN	11261	3827	15083
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15102	38.414	NaN	19712	30	0	3584.6	0.214	+			44328	TSFSEALLK	9	79	498.2730762300067	994.5315995268135	2	498.2735900878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSFSEALLK_	ENSG00000143621|ENST00000361891|ILF2	167.22876102047192	0.0032399547248545047	6				NaN	NaN	0	NaN	11270	3830	15101
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15103	38.418	NaN	19414	30	0	3792.7	0.106	+			19078	IYIAGHPAF	9	81	494.7653359751179	987.5161190170359	2	494.7660217285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IYIAGHPAF_	ENSG00000104824|ENST00000221419|HNRNPL;ENST00000568980.1_1_15:34781792-34782686:-|nuORF;HNRNPL|p.P337Hfs*58|9|0.35|ENSG00000104824|chr19:38840319-38840319|G/-|frameshift_variant;HNRNPL|p.P338Tfs*56|1|0.23|ENSG00000104824|chr19:38840318-38840319|-/G|frameshift_variant;nc|ENSG00000104824|P14866-2|HNRNPL	116.12168088208365	0.02354759995895761	6				NaN	NaN	0	NaN	11271	3830	15101
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15104	38.42	NaN	12088	30	0	2492.7	0.106			+	12513	GEERTGQVL	9	73	515.7612932850149	1029.5080336368296	2	515.7617797851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))GEERTGQVL_	REV__ANXA10|p.M156V|1|0.12|ENSG00000109511|chr4:168165312-168165312|A/G|missense_variant;REV__ENSG00000109511|ENST00000359299|ANXA10;REV__ENST00000503003.1_1_4:169086462-169099142:+|nuORF;REV__ENST00000507278.5_1_4:169086345-169108582:+|nuORF	110.11987700582712	0.028875675806141952	6				NaN	NaN	0	NaN	11272	3830	15101
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15105	38.422	NaN	9109.8	30	0	2086.7	0.106				-1	 	0	74	476.7761136808259	951.5376744284519	2	476.7763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11273	3830	15101
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15106	38.423	NaN	10271	30	0	1649.8	0.106				-1	 	0	75	537.2681754773869	1072.5217980215737	2	537.2693481445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11274	3830	15101
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15107	38.425	NaN	4110.4	30	0	721.07	0.034	+			24038	LEFSATKL	8	60	454.75732018886526	907.5000874445305	2	454.75726318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LEFSATKL_	ENSG00000136628|ENST00000366923|EPRS1	77.31757898189308	0.345924878368729	6				NaN	NaN	0	NaN	11275	3830	15101
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15108	38.426	NaN	10828	30	0	2264.5	0.139				-1	 	0	63	437.2262796849369	872.4380064366738	2	437.22674560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11276	3830	15101
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15123	38.459	NaN	58741	30	0	8496.5	0.215	+			3222	ASLADIMAK	9	95	460.24873548708206	918.4829180409641	2	460.2491760253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASLADIMAK_	ENSG00000114391|ENST00000394077|RPL24;ENST00000446071.1_1_9:72832122-72832404:+|nuORF	136.26810882979174	0.012230845423532208	6				NaN	NaN	0	NaN	11288	3833	15122
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15124	38.463	NaN	4724.2	30	0	562.04	0.106	+			41299	SVLNIPMAK	9	61	486.78020600137626	971.5458590695525	2	486.7805480957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVLNIPMAK_	ENSG00000197969|ENST00000360280|VPS13A;nc|ENSG00000197969|Q96RL7-2|VPS13A;nc|ENSG00000197969|Q96RL7-3|VPS13A;nc|ENSG00000197969|Q96RL7-4|VPS13A;VPS13A|p.N2071Tfs*18|2|0.32|ENSG00000197969|chr9:77337367-77337367|A/-|frameshift_variant;VPS13A|p.Y2315Ifs*2|1|0.09|ENSG00000197969|chr9:77340463-77340463|T/-|frameshift_variant	69.6276240434122	0.14239879520340665	6				NaN	NaN	0	NaN	11289	3833	15122
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15125	38.465	NaN	7178.6	30	0	1657.2	0.106	+			12242	GASLADIMAK	10	69	488.75944856190415	975.5043441906083	2	488.75994873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GASLADIMAK_	ENSG00000114391|ENST00000394077|RPL24;ENST00000446071.1_1_9:72832122-72832404:+|nuORF	112.10723106719422	0.0417416748461292	6				NaN	NaN	0	NaN	11290	3833	15122
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15126	38.467	NaN	3878.6	30	0	341.38	0.106			+	33230	RFVGWGNKF	9	71	555.7960741688008	1109.5775954044016	2	555.797607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RFVGWGNKF_	REV__ENST00000399668.6_1_15:40886537-40895155:+|nuORF	30.503639358989545	0.5181749237905803	6				NaN	NaN	0	NaN	11291	3833	15122
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15127	38.468	NaN	4526	30	0	615.97	0.106			+	28375	NELIKSVYI	9	75	539.8105236579046	1077.606494382609	2	539.8104248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NELIKSVYI_	REV__ENSG00000165966|ENST00000402685|PDZRN4	42.242577148874844	0.39395485528656077	6				NaN	NaN	0	NaN	11292	3833	15122
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15128	38.47	NaN	3410.1	30	0	584.09	0.034	+			12134	GAHGIIVVY	9	63	464.76547371865774	927.5163945041155	2	464.76568603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GAHGIIVVY_	ENSG00000138069|ENST00000409784|RAB1A;ENSG00000174903|ENST00000311481|RAB1B	49.21078951299608	0.3122205139198386	6				NaN	NaN	0	NaN	11293	3833	15122
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15129	38.471	NaN	12778	30	0	1423.1	0.141	+			11260	FIMDRAQAL	9	78	532.7802522668027	1063.5459516004053	2	532.7811279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FIMDRAQAL_	ENSG00000105576|ENST00000425528|TNPO2;ENST00000588484.1_1_19:12826020-12830096:-|nuORF;nc|ENSG00000105576|O14787-2|TNPO2;TNPO2|p.H347Pfs*4|1|0.35|ENSG00000105576|chr19:12711373-12711374|-/G|frameshift_variant	70.8162118820467	0.13725933411854815	6				NaN	NaN	0	NaN	11294	3833	15122
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15144	38.503	NaN	5049.1	30	0	1450.7	0.214				-1	 	0	69	470.2605973201257	469.25332085352574	1	470.26080322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11306	3836	15143
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15145	38.507	NaN	8578.1	30	0	1868.5	0.106	+			35967	SEGTFGIHV	9	66	473.7345462629713	945.4545395927427	2	473.7348327636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEGTFGIHV_	ENSG00000088888|ENST00000428216|MAVS;nc|ENSG00000088888|Q7Z434-4|MAVS	133.4690685054315	0.013543987435668854	6				NaN	NaN	0	NaN	11307	3836	15143
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15146	38.509	NaN	3997.4	30	0	479.26	0.106	+			11962	FVLKEGVEY	9	73	542.2900273182547	1082.5655017033093	2	542.2908325195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FVLKEGVEY_	ENSG00000141522|ENST00000269321|ARHGDIA;nc|ENSG00000141522|P52565-2|ARHGDIA	66.42927471994793	0.16001998865088202	6				NaN	NaN	0	NaN	11308	3836	15143
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15147	38.51	NaN	5959.8	30	0	608.56	0.106			+	-1	YSTLGQLCL	9	84	527.7637754118524	1053.5129978905047	2	528.2634887695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_YSTLGQLC(Carbamidomethyl (C))L_	REV__ENST00000377893.2_1_1:6307779-6307875:-|nuORF	34.172542307311794	0.4838870758800184	6				NaN	NaN	0	NaN	11309	3836	15143
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15148	38.512	NaN	4346.5	30	0	570.84	0.106			+	-1	PMALCLPLPQ	10	73	549.7881538259733	NaN	0	549.7877807617188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_PM(Oxidation (M))ALCLPLPQ_	REV__ENST00000524249.5_1_2:46768823-46769105:-|nuORF	60.29395666154354	0.23187770035194621	6				NaN	NaN	0	NaN	11310	3836	15143
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15149	38.514	NaN	7126.5	30	0	446.59	0.037	+			18455	ISEENFRVM	9	74	562.7734237075551	1123.5322944819102	2	562.7743530273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ISEENFRVM_	ENSG00000138160|ENST00000260731|KIF11;KIF11|p.K673Rfs*3|1|0.12|ENSG00000138160|chr10:92637397-92637397|A/-|frameshift_variant	150.36159442982594	0.006784847064083231	6				NaN	NaN	0	NaN	11311	3836	15143
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15150	38.515	NaN	3989.3	30	0	356.1	0.14	+			30435	PYLKAASGLAG	11	68	524.2936227056584	1046.5726924781168	2	524.2957763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PYLKAASGLAG_	ENST00000373115.4_1_10:73769153-73769792:+|nuORF	45.97224482568171	0.4762245054624163	6				NaN	NaN	0	NaN	11312	3836	15143
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15168	38.554	NaN	106400	30	0	11366	0.21	+			11946	FVIETARQL	9	95	538.8077004734764	1075.6008480137527	2	538.8088989257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FVIETARQL_	ENSG00000119669|ENST00000238647|IRF2BPL;ENSG00000168264|ENST00000366609|IRF2BP2;IRF2BP2|p.K554Nfs*26|1|0.21|ENSG00000168264|chr1:234607239-234607239|T/-|frameshift_variant;IRF2BPL|p.G195Afs*17|1|0.33|ENSG00000119669|chr14:77027209-77027209|C/-|frameshift_variant;IRF2BPL|p.G244Vfs*101|1|0.32|ENSG00000119669|chr14:77027062-77027062|C/-|frameshift_variant;IRF2BPL|p.L713Sfs*54|1|0.54|ENSG00000119669|chr14:77025656-77025656|G/-|frameshift_variant;nc|ENSG00000168264|Q7Z5L9-2|IRF2BP2	136.98908636845044	0.011892605960677736	6				NaN	NaN	0	NaN	11327	3839	15167
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15169	38.557	NaN	8422.2	30	0	613.51	0.106				-1	 	0	76	499.7969543943529	997.5793558555058	2	499.7974548339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11328	3839	15167
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15170	38.559	NaN	15577	30	0	1488.1	0.106			+	15760	GVSSVRLHR	9	94	526.8021971233961	1051.5898413135922	2	526.8030395507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))GVSSVRLHR_	REV__ENST00000577539.1_1_18:9950385-9950580:+|nuORF	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	11329	3839	15167
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15171	38.561	NaN	23818	30	0	2625.9	0.106			+	44155	TQNGGREKME	10	85	575.2692118507749	1148.5238707683498	2	575.2703247070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TQNGGREKME_	REV__ENSG00000105771|ENST00000270066|SMG9;REV__ENST00000595700.5_1_19:44242246-44254893:-|nuORF;REV__nc|ENSG00000105771|Q9H0W8-2|SMG9;REV__SMG9|p.H366Tfs*2|1|0.22|ENSG00000105771|chr19:43734395-43734395|G/-|frameshift_variant	52.936696900407355	0.4300801048568001	6				NaN	NaN	0	NaN	11330	3839	15167
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15172	38.563	NaN	8707.2	30	0	1309	0.106	+			33207	RFEEAHFTF	9	74	592.2798069177971	1182.5450609023942	2	592.2803344726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RFEEAHFTF_	ENSG00000131788|ENST00000393045|PIAS3;ENST00000369299.7_1_1:145575401-145580415:+|nuORF;ENST00000498436.2_1_1:145578572-145580415:+|nuORF;PIAS3|p.L222Cfs*56|1|0.24|ENSG00000131788|chr1:145855741-145855741|G/-|frameshift_variant	63.53385203322761	0.18415635464017938	6				NaN	NaN	0	NaN	11331	3839	15167
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15173	38.565	NaN	7386.7	30	0	459.98	0.035	+			30552	QALEKDKPS	9	72	508.2754556384296	1014.5363583436592	2	509.2769470214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QALEKDKPS_	ENSG00000023191|ENST00000354420|RNH1;ENST00000525522.5_1_11:494693-499199:-|nuORF;ENST00000525701.5_1_11:494693-500690:-|nuORF;ENST00000529768.5_1_11:494693-494957:-|nuORF	39.252832667884924	0.4290233611298554	6				NaN	NaN	0	NaN	11332	3839	15167
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15174	38.565	NaN	6386.3	30	0	1355.2	0.144	+			27642	MPRLHWLV	8	53	351.2007731389934	1050.5804900171802	3	351.2009582519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MPRLHWLV_	nc|ENSG00000171509|Q9HBX9-5|RXFP1	47.91560031466742	0.6071945918984287	6				NaN	NaN	0	NaN	11333	3839	15167
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15192	38.604	NaN	14384	30	0	1161.8	0.214	+			28642	NLFDKGILA	9	74	495.78404901707313	989.5535451009463	2	495.7845458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NLFDKGILA_	DNAH1|p.K1480Sfs*13|1|0.07|ENSG00000114841|chr3:52359941-52359941|G/-|frameshift_variant;ENSG00000114841|ENST00000420323|DNAH1;ENST00000486752.5_1_3:52350520-52422757:+|nuORF;ENST00000497875.1_1_3:52356446-52387784:+|nuORF;nc|ENSG00000114841|Q9P2D7-3|DNAH1;nc|ENSG00000114841|Q9P2D7-6|DNAH1;nc|ENSG00000114841|Q9P2D7-8|DNAH1	66.96192283764107	0.15557981141143568	6				NaN	NaN	0	NaN	11348	3842	15191
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15193	38.607	NaN	13181	30	0	1740	0.106	+			931	AEILKNEAY	9	85	525.7792078468437	1049.5438627604874	2	525.7776489257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEILKNEAY_	ENSG00000224960|ENST00000412172|PPP4R3C;nc|ENSG00000224960|Q6ZMV5-2|PPP4R3C	56.43379154798735	0.2433427591689151	6				NaN	NaN	0	NaN	11349	3842	15191
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15194	38.609	NaN	10863	30	0	1245.5	0.106			+	23394	LAAFLTAGLA	10	81	474.2795785299594	946.5446041267188	2	474.7796630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LAAFLTAGLA_	REV__nc|ENSG00000173349|Q587I9|SFT2D3	63.30626980617807	0.33577009411590547	6				NaN	NaN	0	NaN	11350	3842	15191
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15195	38.611	NaN	19773	30	0	2903.3	0.106	+			14118	GSLNWVPVTK	10	83	550.8080911686147	1099.6016294040294	2	550.8094482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GSLNWVPVTK_	ENSG00000196188|ENST00000358184|CTSE;nc|ENSG00000196188|P14091-2|CTSE;nc|ENSG00000196188|P14091-3|CTSE	149.94371410395783	0.008505529634726706	6				NaN	NaN	0	NaN	11351	3842	15191
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15196	38.613	NaN	4197	30	0	1113.8	0.106	+			18535	ISLLVGGIGV	10	60	464.29833848888757	926.5821240445752	2	464.2972717285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ISLLVGGIGV_	tr|U7SJ54|U7SJ54_FUSNUABCtransporterpermeaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02095PE=3SV=1	37.15910966729921	0.575322462179216	6				NaN	NaN	0	NaN	11352	3842	15191
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15197	38.615	NaN	4575.1	30	0	851.38	0.034	+			16520	HEVGIGSVL	9	54	455.7526590660635	909.490765198927	2	455.7528991699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HEVGIGSVL_	ENSG00000119760|ENST00000337768|SUPT7L;nc|ENSG00000119760|O94864-2|SUPT7L;nc|ENSG00000119760|O94864-4|SUPT7L	85.35947970620816	0.07794846947388434	6				NaN	NaN	0	NaN	11353	3842	15191
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15198	38.615	NaN	2494.9	30	0	283.6	0.139			+	24246	LETIYQLT	8	59	490.7679746743881	979.5213964155762	2	490.76806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LETIYQLT_	REV__ENST00000478296.5_1_3:75787041-75787971:-|nuORF	66.42927471994793	0.4381325844043345	6				NaN	NaN	0	NaN	11354	3842	15191
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15216	38.654	NaN	52865	30	0	12116	0.214				-1	 	0	78	457.2762746333306	912.5379963334613	2	457.2764892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11369	3845	15215
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15217	38.658	NaN	12637	30	0	877.95	0.106	+			17413	IASKAVYVP	9	69	474.2795785299594	946.5446041267188	2	474.28118896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IASKAVYVP_	ENSG00000162105|ENST00000601538|SHANK2;nc|ENSG00000162105|Q9UPX8-1|SHANK2;nc|ENSG00000162105|Q9UPX8-4|SHANK2;SHANK2|p.I1007Sfs*18|1|0.27|ENSG00000162105|chr11:70486136-70486137|-/C|frameshift_variant;SHANK2|p.P1067Sfs*36|1|0.11|ENSG00000162105|chr11:70485957-70485958|-/A|frameshift_variant;SHANK2|p.P1101Lfs*73|1|0.06|ENSG00000162105|chr11:70485854-70485854|G/-|frameshift_variant;SHANK2|p.Q852Sfs*20|1|0.32|ENSG00000162105|chr11:70486603-70486604|-/G|frameshift_variant;SHANK2|p.T905Sfs*11|1|0.27|ENSG00000162105|chr11:70486442-70486443|-/C|frameshift_variant	66.42927471994793	0.16001998865088202	6				NaN	NaN	0	NaN	11370	3845	15215
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15218	38.66	NaN	11778	30	0	4573	0.106			+	29692	PGVDQGRGHRI	11	72	596.3204434499951	1190.62633396679	2	596.3211669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PGVDQGRGHRI_	REV__ENST00000348261.10_1_16:1257291-1259156:+|nuORF	47.95952297671804	0.44903247279694136	6				NaN	NaN	0	NaN	11371	3845	15215
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15219	38.661	NaN	7264.1	30	0	1441.7	0.106	+			11077	FETFNTPA	8	61	463.7157264007522	925.4168998683044	2	463.716064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FETFNTPA_	ACTB|p.M132T|1|0.15|ENSG00000075624|chr7:5528688-5528688|A/G|missense_variant;ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196604|ENST00000409914|POTEF;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000403258.1_1_6:88986231-88986483:-|nuORF;ENST00000415776.1_1_Y:19869357-19869702:-|nuORF;ENST00000418987.2_1_9:103493819-103494230:+|nuORF;ENST00000428275.1_1_X:53172669-53172729:-|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000570019.1_1_15:34666200-34666557:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENST00000587663.1_1_18:60109485-60109668:+|nuORF;nc|ENSG00000204434|Q9BYX7|POTEKP	93.19546047674547	0.2677966331495483	6				NaN	NaN	0	NaN	11372	3845	15215
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15220	38.663	NaN	10554	30	0	1943.5	0.106	+			46456	VESPVICKI	9	80	494.28013340214045	NaN	0	494.27996826171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VESPVICKI_	ENSG00000068912|ENST00000185150|ERLEC1;nc|ENSG00000068912|Q96DZ1-2|ERLEC1;nc|ENSG00000068912|Q96DZ1-3|ERLEC1	47.657333605630114	0.2228375344433429	6				NaN	NaN	0	NaN	11373	3845	15215
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15221	38.665	NaN	5744.5	30	0	1407.9	0.036	+			45651	TYSSSYEQF	9	71	556.2320227805279	1110.4494926278558	2	556.2329711914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TYSSSYEQF_	ENSG00000135250|ENST00000393651|SRPK2;nc|ENSG00000135250|P78362|SRPK2	82.24051045832904	0.08786059719216216	6				NaN	NaN	0	NaN	11374	3845	15215
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15222	38.666	NaN	2995.1	30	0	301.56	0.141				-1	LITMKDEDI	9	67	547.2767692543077	1092.5389855754154	2	547.2769165039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_LITM(Oxidation (M))KDEDI_	nc|ENSG00000181355|Q8IZS5-2|OFCC1	56.72105179125745	0.24094814563026265	6				NaN	NaN	0	NaN	11375	3845	15215
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15240	38.705	NaN	13774	30	0	1902.6	0.214	+			44525	TSVGYAIFK	9	88	493.2701940232837	984.5258351133674	2	493.27117919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSVGYAIFK_	ENSG00000055044|ENST00000264279|NOP58;ENST00000467734.5_1_2:203130664-203142690:+|nuORF;ENST00000472050.5_1_2:203130664-203149064:+|nuORF;ENST00000488403.5_1_2:203130664-203149205:+|nuORF;ENST00000492740.5_1_2:203130664-203139913:+|nuORF	118.74307786436346	0.02196067127630568	6				NaN	NaN	0	NaN	11390	3848	15239
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15241	38.709	NaN	22624	30	0	3067.3	0.106	+			17568	IEAINGQSL	9	84	472.75538345154234	943.4962139698847	2	472.7555236816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IEAINGQSL_	ENSG00000123159|ENST00000393033|GIPC1;ENST00000585606.5_1_19:14590895-14591279:-|nuORF;nc|ENSG00000123159|O14908-2|GIPC1	74.1650062923329	0.12277912660386392	6				NaN	NaN	0	NaN	11391	3848	15239
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15242	38.711	NaN	14158	30	0	1828.5	0.106	+			28958	NSDPNLHLL	9	84	511.76644170823255	1021.5183304832651	2	511.7672424316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NSDPNLHLL_	ENSG00000136830|ENST00000373312|NIBAN2;nc|ENSG00000136830|Q96TA1-2|NIBAN2	104.0567914643314	0.03506238181059741	6				NaN	NaN	0	NaN	11392	3848	15239
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15243	38.712	NaN	4327.4	30	0	574.61	0.106	+			2454	APLDSIHSL	9	70	476.7581874955457	951.5018220578914	2	476.7584228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_APLDSIHSL_	ENSG00000169710|ENST00000306749|FASN	71.29570347882199	0.13518600952103718	6				NaN	NaN	0	NaN	11393	3848	15239
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15244	38.714	NaN	3657.2	30	0	389.06	0.106	+			28872	NPYSGDLTKF	10	67	571.2803921389086	NaN	0	571.2803955078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NPYSGDLTKF_	ENSG00000143569|ENST00000428931|UBAP2L;nc|ENSG00000143569|Q14157-1|UBAP2L;nc|ENSG00000143569|Q14157-3|UBAP2L;nc|ENSG00000143569|Q14157-4|UBAP2L;nc|ENSG00000143569|Q14157-5|UBAP2L	91.26522074875469	0.04908179266484229	6				NaN	NaN	0	NaN	11394	3848	15239
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15245	38.716	NaN	8374.6	30	0	1333.1	0.035	+			25325	LPDERTISL	9	82	522.2902853962074	1042.5660178592148	2	522.29052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LPDERTISL_	CSTF1|p.G395Afs*23|1|0.04|ENSG00000101138|chr20:56403613-56403614|GG/-|frameshift_variant;ENSG00000101138|ENST00000217109|CSTF1	78.26377905018397	0.10505600812668463	6				NaN	NaN	0	NaN	11395	3848	15239
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15246	38.717	NaN	2345	30	0	361.63	0.144	+			14910	GTLTQNEMIFK	11	71	641.3295257755638	1280.6444986179274	2	641.3289794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GTLTQNEMIFK_	ENSG00000054793|ENST00000338821|ATP9A;ENSG00000166377|ENST00000426216|ATP9B;nc|ENSG00000054793|O75110-2|ATP9A;nc|ENSG00000166377|O43861-2|ATP9B	79.48907831485694	0.15663227531959176	6				NaN	NaN	0	NaN	11396	3848	15239
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15264	38.756	NaN	31424	30	0	3525.7	0.213				-1	 	0	83	600.2889250623906	1198.5632971915811	2	600.2903442382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11411	3851	15263
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15265	38.76	NaN	9530.9	30	0	1345.6	0.106			+	-1	AIALGLLLC	9	82	472.2854667515119	942.5563805698238	2	472.28582763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_AIALGLLLC(Carbamidomethyl (C))_	REV__ENSG00000175489|ENST00000339007|LRRC25	49.21078951299608	0.3122205139198386	6				NaN	NaN	0	NaN	11412	3851	15263
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15266	38.762	NaN	9127.4	30	0	747.78	0.106	+			6106	AVNMVPFPR	9	80	515.7780491647574	1029.5415453963146	2	515.779052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVNMVPFPR_	CON__ENSEMBL:ENSBTAP00000025008;ENSG00000101162|ENST00000217133|TUBB1;ENSG00000104833|ENST00000264071|TUBB4A;ENSG00000137267|ENST00000333628|TUBB2A;ENSG00000137285|ENST00000259818|TUBB2B;ENSG00000173213|ENST00000308911|TUBB8B;ENSG00000176014|ENST00000317702|TUBB6;ENSG00000188229|ENST00000340384|TUBB4B;ENSG00000196230|ENST00000327892|TUBB;ENSG00000258947|ENST00000315491|TUBB3;ENSG00000261456|ENST00000568584|TUBB8;ENST00000290377.9_1_9:141071128-141071713:+|nuORF;ENST00000417736.2_1_18:12308439-12326126:+|nuORF;ENST00000518096.1_1_8:30210219-30210855:+|nuORF;ENST00000604929.1_1_9:140136931-140138005:+|nuORF;nc|ENSG00000258947|Q13509-2|TUBB3	76.7741389293348	0.11149722112137898	6				NaN	NaN	0	NaN	11413	3851	15263
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15267	38.763	NaN	7524.2	30	0	1239.4	0.106	+			1262	AESAPAWRL	9	73	500.76371599774126	999.5128790622825	2	500.7641296386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AESAPAWRL_	ENSG00000071994|ENST00000541970|PDCD2;ENST00000544336.5_2_6:170892694-170893702:-|nuORF;nc|ENSG00000071994|Q16342-2|PDCD2;nc|ENSG00000071994|Q16342-3|PDCD2;nc|ENSG00000071994|Q16342-4|PDCD2;nc|ENSG00000071994|Q16342-5|PDCD2	85.16082228582465	0.07850854922700509	6				NaN	NaN	0	NaN	11414	3851	15263
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15268	38.765	NaN	3109.6	30	0	355.85	0.106			+	26238	LSSQLSQLG	9	64	466.7561679038364	NaN	0	466.7557373046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSSQLSQLG_	REV__ENSG00000112494|ENST00000230256|UNC93A;REV__nc|ENSG00000112494|Q86WB7-2|UNC93A	77.31757898189308	0.08057531075035683	6				NaN	NaN	0	NaN	11415	3851	15263
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15269	38.767	NaN	6423.2	30	0	803.27	0.034	+			46435	VERVITIM	8	76	480.78010768874947	959.545662444299	2	480.77923583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VERVITIM_	ENSG00000231500|ENST00000439602|RPS18;ENST00000474626.5_1_6:33239896-33243984:+|nuORF;ENST00000496813.5_1_6:33239896-33244045:+|nuORF	64.20726635412375	0.4601301477144759	6				NaN	NaN	0	NaN	11416	3851	15263
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15270	38.768	NaN	3230.6	30	0	264.78	0.145			+	-1	AMLGSEMTFHE	11	60	437.5175770737238	1309.5309018213716	3	437.5179138183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))AM(Oxidation (M))LGSEMTFHE_	REV__ENST00000552283.5_1_12:102505931-102512181:-|nuORF	29.550750289552195	0.6798279264880025	6				NaN	NaN	0	NaN	11417	3851	15263
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15286	38.803	NaN	21710	30	0	7185.8	0.214			+	6726	CAKQAVEPDI	10	79	537.2681754773869	1072.5217980215737	2	537.2692260742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CAKQAVEPDI_	REV__ENSG00000143393|ENST00000368873|PI4KB;REV__nc|ENSG00000143393|Q9UBF8-2|PI4KB;REV__PI4KB|p.R270Gfs*14|1|0.35|ENSG00000143393|chr1:151315674-151315674|T/-|frameshift_variant;REV__PI4KB|p.Y149Ifs*50|1|0.05|ENSG00000143393|chr1:151316038-151316038|C/-|frameshift_variant	69.6276240434122	0.2803623802747859	6				NaN	NaN	0	NaN	11430	3854	15285
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15287	38.806	NaN	13366	30	0	4391	0.106	+			32091	QSFFTITQK	9	78	550.2932902622524	NaN	0	550.293212890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QSFFTITQK_	ENSG00000177084|ENST00000320574|POLE;ENST00000534922.5_1_12:133202008-133209092:-|nuORF;ENST00000537064.5_1_12:133201285-133234573:-|nuORF	70.39856735676683	0.10496893946726124	6				NaN	NaN	0	NaN	11431	3854	15285
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15288	38.808	NaN	9833.9	30	0	1445.1	0.106	+			49743	VYNSEYYHF	9	78	611.2640098612519	1220.5134667893037	2	611.2640380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYNSEYYHF_	ENSG00000112655|ENST00000230419|PTK7;ENST00000487673.5_1_6:43111066-43128616:+|nuORF;nc|ENSG00000112655|Q13308-2|PTK7;nc|ENSG00000112655|Q13308-3|PTK7;nc|ENSG00000112655|Q13308-4|PTK7;nc|ENSG00000112655|Q13308-6|PTK7;PTK7|p.R964H|1|0.36|ENSG00000112655|chr6:43159805-43159805|G/A|missense_variant	190.51785368661015	0.00024017880420896124	6				NaN	NaN	0	NaN	11432	3854	15285
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15289	38.81	NaN	3556.9	30	0	547.25	0.106	+			47485	VQDIFTYAK	9	72	542.7872541235398	1083.5599553138795	2	542.7877807617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VQDIFTYAK_	ENSG00000155465|ENST00000674313|SLC7A7	50.79123845855914	0.29368248050764684	6				NaN	NaN	0	NaN	11433	3854	15285
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15290	38.812	NaN	12062	30	0	1436.5	0.106	+			23981	LDVNKIFY	8	80	506.27843852125244	1010.5423241093049	2	506.2801513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LDVNKIFY_	ENSG00000145864|ENST00000393959|GABRB2	66.42927471994793	0.4381325844043345	6				NaN	NaN	0	NaN	11434	3854	15285
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15291	38.814	NaN	4799.7	30	0	650.23	0.037	+			29315	NYQGHFHLF	9	79	581.7750025846914	1161.5354522361827	2	581.7763061523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NYQGHFHLF_	ENST00000283632.4_1_2:86968058-86968091:+|nuORF	114.5858319719848	0.024477364776774663	6				NaN	NaN	0	NaN	11435	3854	15285
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15292	38.814	NaN	6165.6	30	0	784.09	0.146				-1	VYMTFVQATS	10	47	388.18552332811356	1161.5347405845407	3	388.1855773925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_VYM(Oxidation (M))TFVQATS_	ENSG00000006282|ENST00000006658|SPATA20;ENST00000503063.5_1_17:48625445-48628667:+|nuORF;nc|ENSG00000006282|Q8TB22-3|SPATA20;nc|ENSG00000006282|Q8TB22-4|SPATA20;nc|ENSG00000006282|Q8TB22|SPATA20;SPATA20|p.G180Afs*10|1|0.12|ENSG00000006282|chr17:50549109-50549109|G/-|frameshift_variant;SPATA20|p.S677Pfs*29|1|0.12|ENSG00000006282|chr17:50554367-50554367|T/-|frameshift_variant	29.170058357718403	0.6416167986984785	6				NaN	NaN	0	NaN	11436	3854	15285
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15308	38.85	NaN	9044.6	30	0	1801.8	0.214	+			47411	VPNKVIQCF	9	75	524.2860734079281	1046.5575938826562	2	524.2879028320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VPNKVIQCF_	CLTC|p.A1374*|1|0.05|ENSG00000141367|chr17:59683464-59683465|-/TA|frameshift_variant;CLTC|p.D632Yfs*7|1|0.15|ENSG00000141367|chr17:59666589-59666590|-/TTACA|frameshift_variant;ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000141367|Q00610-2|CLTC	158.07458414430337	0.004987072822166904	6				NaN	NaN	0	NaN	11449	3857	15307
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15309	38.853	NaN	3458.9	30	0	623.94	0.106	+			13716	GPVGVNVTY	9	53	453.2396084093158	904.4646638854316	2	453.2403564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GPVGVNVTY_	ENSG00000196924|ENST00000369850|FLNA;FLNA|p.A1026Lfs*20|1|0.42|ENSG00000196924|chrX:154361439-154361439|C/-|frameshift_variant;FLNA|p.G2237Efs*109|1|0.28|ENSG00000196924|chrX:154352240-154352240|C/-|frameshift_variant;FLNA|p.Q1716Sfs*23|2|0.38|ENSG00000196924|chrX:154354896-154354896|G/-|frameshift_variant;FLNA|p.R2520Vfs*16|1|0.7|ENSG00000196924|chrX:154349560-154349560|G/-|frameshift_variant;nc|ENSG00000196924|P21333-2|FLNA	42.396135135203025	0.392153681582562	6				NaN	NaN	0	NaN	11450	3857	15307
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15310	38.855	NaN	3758.4	30	0	698.51	0.106	+			41902	SVVAVLVYK	9	71	489.30507824313725	976.5956035530745	2	489.3057556152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVVAVLVYK_	ENSG00000136869|ENST00000355622|TLR4;nc|ENSG00000136869|O00206-2|TLR4;nc|ENSG00000136869|O00206-3|TLR4	101.60071028292904	0.0375685401170269	6				NaN	NaN	0	NaN	11451	3857	15307
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15311	38.857	NaN	2937.2	30	0	296.42	0.106	+			28779	NPENLATLERY	11	73	660.335718025857	1318.6568831185139	2	660.334716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NPENLATLERY_	ENSG00000178982|ENST00000248342|EIF3K;ENST00000586932.5_1_19:39109833-39116793:+|nuORF;ENST00000593062.5_1_19:39109833-39121488:+|nuORF;nc|ENSG00000178982|Q9UBQ5-2|EIF3K	123.61838826891271	0.013225395544318664	6				NaN	NaN	0	NaN	11452	3857	15307
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15312	38.859	NaN	3400.6	30	0	295.06	0.106			+	48483	VTMGLTANL	9	66	460.24873548708206	918.4829180409641	2	460.25439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTMGLTANL_	REV__ENSG00000205277|ENST00000536621|MUC12;REV__nc|ENSG00000205277|Q9UKN1|MUC12	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	11453	3857	15307
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15313	38.861	NaN	2970.4	30	0	487.49	0.031			+	49215	VVNAAALV	8	52	378.73559840246946	755.456643871739	2	378.7362060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VVNAAALV_	REV__ENSG00000240065|ENST00000374859|PSMB9;REV__ENST00000464863.1_1_6:32825734-32826344:+|nuORF;REV__ENST00000467593.1_1_6:32823908-32826344:+|nuORF;REV__nc|ENSG00000240065|P28065-2|PSMB9;REV__PSMB9|p.N105K|1|0.37|ENSG00000240065|chr6:32858059-32858059|T/G|missense_variant	23.036711822280957	0.7814608874307191	6				NaN	NaN	0	NaN	11454	3857	15307
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15314	38.861	NaN	14513	30	0	2700.9	0.142	+			3263	ASLMHSFILK	10	81	382.88245963928716	1145.6255495180615	3	382.8832702636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASLMHSFILK_	ENSG00000125971|ENST00000357156|DYNLRB1;ENST00000480759.1_1_20:33117938-33128425:+|nuORF	44.377184641726394	0.5088115166961078	6				NaN	NaN	0	NaN	11455	3857	15307
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15330	38.897	NaN	12389	30	0	2340.4	0.214	+			3264	ASLMHSFILK	10	75	573.819843314573	1145.6251336959458	2	573.8209228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASLMHSFILK_	ENSG00000125971|ENST00000357156|DYNLRB1;ENST00000480759.1_1_20:33117938-33128425:+|nuORF	126.24258497203832	0.01851300475414303	6				NaN	NaN	0	NaN	11468	3860	15329
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15331	38.9	NaN	9651.5	30	0	2582.5	0.106	+			3099	ASGGIFVLK	9	63	446.2677616949411	890.5209704566822	2	446.26837158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASGGIFVLK_	ENSG00000030066|ENST00000378460|NUP160;ENST00000526870.1_3_11:47861380-47861614:-|nuORF;nc|ENSG00000030066|Q12769|NUP160	148.04295825190792	0.0073252839830139265	6				NaN	NaN	0	NaN	11469	3860	15329
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15332	38.902	NaN	10146	30	0	5393.8	0.106	+			38898	SSPFKVSPL	9	63	481.2706557086426	960.5267584840852	2	481.2708435058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSPFKVSPL_	ENSG00000168497|ENST00000304141|CAVIN2	56.43379154798735	0.2433427591689151	6				NaN	NaN	0	NaN	11470	3860	15329
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15333	38.904	NaN	5552.4	30	0	1465.5	0.106			+	-1	QMTRFMLK	8	68	543.7759990275957	1085.5374451219914	2	543.777099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Oxidation (M)	_QM(Oxidation (M))TRFM(Oxidation (M))LK_	REV__ENST00000481340.1_1_X:2832668-2835863:-|nuORF;REV__nc|ENSG00000006756|P51689-2|ARSD	44.116797842482775	0.6307669463330267	6				NaN	NaN	0	NaN	11471	3860	15329
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15334	38.906	NaN	2712.8	30	0	644.32	0.106			+	44932	TVALQKLI	8	52	443.2914652436328	884.5683775540656	2	443.29180908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TVALQKLI_	REV__ENSG00000136925|ENST00000341170|TSTD2;REV__ENST00000375165.5_1_9:100368507-100388213:-|nuORF	37.15910966729921	0.6739408393984688	6				NaN	NaN	0	NaN	11472	3860	15329
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15335	38.908	NaN	2907.7	30	0	388.5	0.035	+			2189	ALNGRRLGKG	10	61	521.3158387933022	1040.6171246534043	2	521.8167114257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ALNGRRLGKG_	ENST00000473834.1_1_3:38065750-38065924:-|nuORF	42.396135135203025	0.5270658956260207	6				NaN	NaN	0	NaN	11473	3860	15329
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15336	38.908	NaN	4315	30	0	598.17	0.14	+			27347	MIKEKEEM	8	68	519.2517857553378	1036.4890185774755	2	519.2517700195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MIKEKEEM_	CENPE|p.K2291Hfs*13|1|0.04|ENSG00000138778|chr4:103132746-103132747|-/ATTTGTATATG|frameshift_variant;CENPE|p.R2080Gfs*3|1|0.3|ENSG00000138778|chr4:103138416-103138416|T/-|frameshift_variant;CENPE|p.S2121Efs*18|1|0.05|ENSG00000138778|chr4:103136302-103136303|-/TGCTC|frameshift_variant;ENSG00000138778|ENST00000265148|CENPE;nc|ENSG00000138778|Q02224-3|CENPE	58.78195531508484	0.5138399468736706	6				NaN	NaN	0	NaN	11474	3860	15329
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15354	38.947	NaN	40203	30	0	7547.1	0.214				-1	 	0	80	491.2837572357342	980.5529615382684	2	491.28399658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11489	3863	15353
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15355	38.95	NaN	12601	30	0	2214.9	0.106	+			11987	FVQGIFVEK	9	74	533.799645481991	1065.5847380307819	2	533.8002319335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FVQGIFVEK_	ENSG00000116473|ENST00000369709|RAP1A;ENSG00000127314|ENST00000250559|RAP1B;ENST00000460800.5_1_12:69042504-69044290:+|nuORF;ENST00000494982.1_1_1:112233982-112249293:+|nuORF;nc|ENSG00000127314|P61224-2|RAP1B;nc|ENSG00000127314|P61224-3|RAP1B;nc|ENSG00000254893|A6NIZ1|RAP1BL	101.45984612302182	0.0377122763612125	6				NaN	NaN	0	NaN	11490	3863	15353
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15356	38.952	NaN	8602.9	30	0	2480.7	0.106	+			13644	GMNSWNEED	9	69	541.1967398349891	1080.378926736778	2	541.1981201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GMNSWNEED_	ENSG00000135945|ENST00000258428|REV1;ENST00000413697.5_1_2:100019089-100065949:-|nuORF;nc|ENSG00000135945|Q9UBZ9-2|REV1;nc|ENSG00000135945|Q9UBZ9-3|REV1;REV1|p.M392*|1|0.28|ENSG00000135945|chr2:99438640-99438640|T/-|frameshift_variant;REV1|p.M392Nfs*12|1|0.38|ENSG00000135945|chr2:99438639-99438640|-/T|frameshift_variant;REV1|p.T1079Pfs*12|1|0.42|ENSG00000135945|chr2:99403038-99403038|T/-|frameshift_variant	31.529811441608018	0.5085848003137583	6				NaN	NaN	0	NaN	11491	3863	15353
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15357	38.954	NaN	12922	30	0	5897.5	0.106			+	7847	DQRRKLKS	8	80	515.8101378557714	1029.6057227783426	2	515.8107299804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DQRRKLKS_	REV__ENSG00000166323|ENST00000393084|C11orf65;REV__nc|ENSG00000166323|Q8NCR3-2|MFI	41.42661286455405	0.6474601000989023	6				NaN	NaN	0	NaN	11492	3863	15353
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15358	38.956	NaN	4324.3	30	0	751.81	0.106	+			41417	SVNDLTLLK	9	68	501.79488758386645	NaN	0	501.7945251464844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVNDLTLLK_	ENSG00000107104|ENST00000382297|KANK1;ENST00000354485.5_1_9:676972-730286:+|nuORF;ENST00000489369.5_1_9:676972-732786:+|nuORF;nc|ENSG00000107104|Q14678-2|KANK1	85.86182877749512	0.05129763505578642	6				NaN	NaN	0	NaN	11493	3863	15353
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15359	38.958	NaN	3413.7	30	0	309.43	0.036	+			18249	IPALRLTGDY	10	73	559.8125418363833	1117.6105307395665	2	559.8128662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IPALRLTGDY_	tr|U7T6Y8|U7T6Y8_FUSNUBranched-chainaminoacidtransportsystempermeaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00056PE=4SV=1	66.96192283764107	0.30252237217063654	6				NaN	NaN	0	NaN	11494	3863	15353
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15360	38.958	NaN	3131.3	30	0	361.15	0.144	+			43878	TMLTDMMKGNV	11	70	620.789893066665	1239.5652332001298	2	620.7903442382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TMLTDMMKGNV_	ENSG00000125037|ENST00000245046|EMC3;ENST00000487465.5_1_3:10011273-10028351:-|nuORF;nc|ENSG00000125037|Q9P0I2-2|EMC3	42.86426827375447	0.5187511139693657	6				NaN	NaN	0	NaN	11495	3863	15353
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15375	38.992	NaN	4329.7	30	0	458.14	0.214	+			45642	TYRNVMEQF	9	75	594.278306604555	1186.54206027591	2	594.2791137695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TYRNVMEQF_	BAIAP2L1|p.A287Lfs*11|2|0.27|ENSG00000006453|chr7:98310542-98310542|G/-|frameshift_variant;BAIAP2L1|p.F462Lfs*34|1|0.21|ENSG00000006453|chr7:98304232-98304232|A/-|frameshift_variant;BAIAP2L1|p.N24D|1|0.22|ENSG00000006453|chr7:98362414-98362414|T/C|missense_variant;BAIAP2L1|p.N36Ifs*6|1|0.24|ENSG00000006453|chr7:98362382-98362382|C/-|frameshift_variant;BAIAP2L1|p.P436Hfs*60|4|0.39|ENSG00000006453|chr7:98304311-98304311|G/-|frameshift_variant;ENSG00000006453|ENST00000005260|BAIAP2L1;ENST00000462558.5_1_7:97937677-98030347:-|nuORF	89.02883481214508	0.06760336634167786	6				NaN	NaN	0	NaN	11507	3866	15374
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15376	38.995	NaN	5286.2	30	0	744.51	0.106	+			23320	KYQKGFSLW	9	75	578.8101869221135	1155.605820911027	2	578.8112182617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KYQKGFSLW_	ENSG00000067167|ENST00000262213|TRAM1;nc|ENSG00000067167|Q15629-2|TRAM1	122.1759843771914	0.019882474861609503	6				NaN	NaN	0	NaN	11508	3866	15374
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15377	38.997	NaN	4204.5	30	0	351.43	0.106	+			49736	VYNPVRAEW	9	77	567.2891004056385	1132.5636478780768	2	567.2902221679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYNPVRAEW_	ENSG00000165572|ENST00000379485|KBTBD6;KBTBD6|p.C613Afs*34|1|0.51|ENSG00000165572|chr13:41130675-41130675|A/-|frameshift_variant	58.22992032128504	0.22837015374068087	6				NaN	NaN	0	NaN	11509	3866	15374
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15378	38.999	NaN	5264.7	30	0	1444.1	0.106			+	19135	IYNEDKVSFL	10	46	409.8810257509507	1226.6212478530522	3	409.8814392089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IYNEDKVSFL_	REV__ENSG00000204361|ENST00000389586|NXPE2	35.15202426646627	0.5927656479315102	6				NaN	NaN	0	NaN	11510	3866	15374
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15379	39.001	NaN	3412.8	30	0	281.01	0.106	+			28456	NFKEEIRA	8	69	503.7689734306517	1005.5233939281035	2	503.77001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NFKEEIRA_	ENSG00000088836|ENST00000642402|SLC4A11;nc|ENSG00000088836|Q8NBS3-1|SLC4A11;nc|ENSG00000088836|Q8NBS3-4|SLC4A11;nc|ENSG00000088836|Q8NBS3-5|SLC4A11;SLC4A11|p.F477Sfs*7|1|0.26|ENSG00000088836|chr20:3230548-3230548|A/-|frameshift_variant	58.78195531508484	0.5138399468736706	6				NaN	NaN	0	NaN	11511	3866	15374
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15380	39.003	NaN	3063.5	30	0	162.58	0.036	+			6601	AYNQKVDLF	9	65	549.2847677193844	1096.5549825055687	2	549.2843627929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AYNQKVDLF_	EIF2AK4|p.P1003Hfs*17|1|0.32|ENSG00000128829|chr15:40001069-40001069|C/-|frameshift_variant;ENSG00000128829|ENST00000263791|EIF2AK4;nc|ENSG00000128829|Q9P2K8-2|EIF2AK4	39.252832667884924	0.4290233611298554	6				NaN	NaN	0	NaN	11512	3866	15374
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15381	39.003	NaN	2152.3	30	0	221.06	0.142	+			50020	WCWVPAAFST	10	64	584.2686093271141	1166.522665721028	2	584.2695922851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_WCWVPAAFST_	ENST00000245817.4_1_19:6535089-6535281:+|nuORF	30.503639358989545	0.6307262373768582	6				NaN	NaN	0	NaN	11513	3866	15374
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15399	39.043	NaN	11130	30	0	1284	0.214	+			48498	VTNDFVMLK	9	80	533.7825924344108	1065.5506319356216	2	533.7838745117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTNDFVMLK_	ENSG00000100316|ENST00000216146|RPL3;ENST00000417615.1_1_14:99439218-99439536:-|nuORF;ENST00000473638.5_1_22:39708982-39709710:-|nuORF	91.26522074875469	0.06129826844580791	6				NaN	NaN	0	NaN	11528	3869	15398
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15400	39.046	NaN	4564.9	30	0	792.56	0.106	+			18637	ISTLQQAIL	9	66	493.79713786869473	985.5797228041895	2	493.79754638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ISTLQQAIL_	ENSG00000130559|ENST00000389532|CAMSAP1;ENST00000483991.5_1_9:138703157-138717996:-|nuORF;nc|ENSG00000130559|Q5T5Y3-2|CAMSAP1;nc|ENSG00000130559|Q5T5Y3-3|CAMSAP1	60.11826168202944	0.21262886028301267	6				NaN	NaN	0	NaN	11529	3869	15398
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15401	39.048	NaN	3002.2	30	0	569.21	0.106	+			32605	QYLRVETQF	9	74	592.3077390628497	1182.6009251924993	2	592.30908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QYLRVETQF_	ACACA|p.E2200Gfs*26|1|0.48|ENSG00000278540|chr17:37097953-37097954|-/T|frameshift_variant;ENSG00000278540|ENST00000616317|ACACA;nc|ENSG00000278540|Q13085-2|ACACA;nc|ENSG00000278540|Q13085-3|ACACA;nc|ENSG00000278540|Q13085|ACACA	58.2462437865262	0.22823408064396822	6				NaN	NaN	0	NaN	11530	3869	15398
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15402	39.05	NaN	4007.3	30	0	295.04	0.106			+	46512	VEVLKNFY	8	79	506.27843852125244	1010.5423241093049	2	506.7773132324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VEVLKNFY_	REV__tr|U7SJI8|U7SJI8_FUSNUPenicillin-bindingprotein1COS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02062PE=4SV=1	63.30626980617807	0.4690498839812213	6				NaN	NaN	0	NaN	11531	3869	15398
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15403	39.052	NaN	2604.5	30	0	193.05	0.106				-1	 	0	58	457.2762746333306	912.5379963334613	2	457.2764587402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11532	3869	15398
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15404	39.054	NaN	2040.1	30	0	609.74	0.037			+	-1	DMKMETIIM	9	65	572.259554593986	1142.5045562547718	2	572.2608642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Oxidation (M)	_DM(Oxidation (M))KMETIIM(Oxidation (M))_	REV__ENST00000260327.8_1_15:44816696-44816783:+|nuORF	53.351449002276354	0.2690372970092375	6				NaN	NaN	0	NaN	11533	3869	15398
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15405	39.054	NaN	2149.3	30	0	141.17	0.14			+	26595	LTVSIGVAP	9	52	428.7603415761507	855.5061302191015	2	428.7604675292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LTVSIGVAP_	REV__ENSG00000198721|ENST00000380118|ECI2;REV__ENST00000380120.6_1_6:4116110-4130812:-|nuORF;REV__ENST00000464057.5_1_6:4116110-4125894:-|nuORF;REV__ENST00000464583.5_1_6:4119386-4125894:-|nuORF;REV__ENST00000496241.6_1_6:4116110-4130478:-|nuORF;REV__nc|ENSG00000198721|O75521-2|ECI2	63.30626980617807	0.18605348971131092	6				NaN	NaN	0	NaN	11534	3869	15398
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15421	39.089	NaN	13329	30	0	2248.6	0.214	+			28959	NSDPNLHLL	9	81	511.76644170823255	1021.5183304832651	2	511.76690673828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NSDPNLHLL_	ENSG00000136830|ENST00000373312|NIBAN2;nc|ENSG00000136830|Q96TA1-2|NIBAN2	104.0567914643314	0.03506238181059741	6				NaN	NaN	0	NaN	11547	3872	15420
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15422	39.093	NaN	14082	30	0	2854.3	0.106	+			25340	LPDTLKVTY	9	85	525.2969389846356	1048.5793250360712	2	525.297607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LPDTLKVTY_	ENSG00000160255|ENST00000652462|ITGB2;ENST00000475170.5_1_21:46306285-46313576:-|nuORF;ENST00000498666.5_1_21:46313282-46313576:-|nuORF	101.45984612302182	0.0377122763612125	6				NaN	NaN	0	NaN	11548	3872	15420
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15423	39.095	NaN	5287.2	30	0	757.21	0.106	+			27488	MLYMVIMP	8	68	499.25026771503843	996.4859824968769	2	499.2508544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MLYMVIMP_	SLC18A3|p.V54M|1|0.23|ENSG00000187714|chr10:49610900-49610900|G/A|missense_variant	35.200714571348534	0.6875396545722289	6				NaN	NaN	0	NaN	11549	3872	15420
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15424	39.097	NaN	20350	30	0	3744.2	0.106				-1	 	0	75	487.2580413636769	972.5015297941538	2	487.2586975097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11550	3872	15420
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15425	39.099	NaN	5123.8	30	0	695.39	0.106	+			43153	TESSQSFVAV	10	70	527.7557960424739	1053.4970391517477	2	527.7569580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TESSQSFVAV_	ENSG00000198961|ENST00000361189|PJA2;nc|ENSG00000198961|O43164-2|PJA2;PJA2|p.D450Rfs*6|1|0.16|ENSG00000198961|chr5:109368682-109368683|-/T|frameshift_variant	58.22992032128504	0.38193887838457763	6				NaN	NaN	0	NaN	11551	3872	15420
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15426	39.1	NaN	4898.9	30	0	1760.8	0.034				-1	 	0	56	458.73075378157563	915.4469546299513	2	458.7313232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11552	3872	15420
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15427	39.101	NaN	4143.5	30	0	778.08	0.138				-1	 	0	53	446.74734387407506	891.4801348149501	2	446.74761962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11553	3872	15420
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15442	39.134	NaN	14525	30	0	2493.6	0.214	+			17796	IETTGTYQL	9	71	513.2608144778577	1024.5070760225153	2	513.2614135742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IETTGTYQL_	ENSG00000007171|ENST00000313735|NOS2;nc|ENSG00000007171|P35228-2|NOS2;NOS2|p.A650Pfs*53|1|0.21|ENSG00000007171|chr17:27769063-27769063|C/-|frameshift_variant;NOS2|p.Y709*|1|0.33|ENSG00000007171|chr17:27767745-27767745|G/-|frameshift_variant	98.58198989935565	0.04066992115528678	6				NaN	NaN	0	NaN	11565	3875	15441
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15443	39.138	NaN	17380	30	0	2052.5	0.106				-1	 	0	92	600.2889250623906	1198.5632971915811	2	600.290283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11566	3875	15441
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15444	39.14	NaN	18349	30	0	2683.9	0.106	+			11870	FTFSGREL	8	78	478.7449521109963	955.4753512887926	2	478.7452087402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FTFSGREL_	AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK	62.107414245175825	0.4809183816468817	6				NaN	NaN	0	NaN	11567	3875	15441
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15445	39.142	NaN	6594.8	30	0	610.97	0.106	+			35848	SEDEVKLAL	9	72	502.2682700789878	1002.5219872247757	2	502.2685241699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SEDEVKLAL_	ENSG00000169045|ENST00000393432|HNRNPH1;ENST00000513972.5_1_5:179047887-179050134:-|nuORF;ENST00000514332.5_1_5:179048171-179050134:-|nuORF;ENST00000524180.5_1_5:179047015-179050134:-|nuORF	93.1432384553994	0.056003526918089595	6				NaN	NaN	0	NaN	11568	3875	15441
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15446	39.143	NaN	4000.3	30	0	806.33	0.106				-1	 	0	57	451.28884985268746	900.563146772175	2	451.2892150878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11569	3875	15441
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15447	39.145	NaN	4794	30	0	1180.3	0.036	+			46584	VFPDKGYSF	9	63	530.2606425653574	1058.5067321975148	2	530.2614135742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VFPDKGYSF_	ENSG00000116001|ENST00000433529|TIA1;ENST00000477415.5_1_2:70443338-70451751:-|nuORF;ENST00000482876.5_1_2:70442329-70444102:-|nuORF;nc|ENSG00000116001|P31483-2|TIA1	39.252832667884924	0.4290233611298554	6				NaN	NaN	0	NaN	11570	3875	15441
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15448	39.146	NaN	6844	30	0	818.56	0.139				-1	 	0	49	408.7445369759569	815.4745210187139	2	408.7445373535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11571	3875	15441
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15465	39.183	NaN	78565	30	0	17160	0.214	+			39515	STFNVFVGK	9	101	499.76835573606587	997.5221585389318	2	499.76898193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STFNVFVGK_	ENSG00000122642|ENST00000242209|FKBP9;ENST00000494374.5_1_7:32997059-33028356:+|nuORF;FKBP9|p.N129Ifs*10|7|0.31|ENSG00000122642|chr7:32975192-32975192|C/-|frameshift_variant;FKBP9|p.P380Lfs*6|1|0.38|ENSG00000122642|chr7:32996258-32996258|C/-|frameshift_variant;nc|ENSG00000122642|O95302-3|FKBP9	199.70438780651162	3.456851077920069E-05	6				NaN	NaN	0	NaN	11585	3878	15464
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15466	39.187	NaN	24062	30	0	7775.4	0.106	+			29935	PMDKNLNEL	9	75	537.2681754773869	1072.5217980215737	2	537.2691040039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PMDKNLNEL_	DNAH12|p.H2653Sfs*22|1|0.24|ENSG00000174844|chr3:57314595-57314596|-/A|frameshift_variant;ENSG00000174844|ENST00000495027|DNAH12;nc|ENSG00000174844|Q6ZR08-2|DNAH12;nc|ENSG00000174844|Q6ZR08-3|DNAH12;nc|ENSG00000174844|Q6ZR08|DNAH12	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	11586	3878	15464
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15467	39.188	NaN	7153.5	30	0	516.06	0.106	+			18458	ISEIEKRY	8	75	519.2841978371614	1036.5538427411227	2	518.7876586914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ISEIEKRY_	ENSG00000163840|ENST00000296161|DTX3L	62.107414245175825	0.4809183816468817	6				NaN	NaN	0	NaN	11587	3878	15464
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15468	39.19	NaN	5178	30	0	1183.9	0.106	+			17866	IFTNTVARF	9	65	534.794542341067	1067.5745317489339	2	534.7955322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IFTNTVARF_	AKAP11|p.C1327Lfs*13|1|0.05|ENSG00000023516|chr13:42302724-42302725|-/CTTCTACTTTATAATC|frameshift_variant;AKAP11|p.F1607Sfs*48|1|0.11|ENSG00000023516|chr13:42303562-42303562|T/-|frameshift_variant;AKAP11|p.H1753Ifs*3|1|0.11|ENSG00000023516|chr13:42308589-42308589|T/-|frameshift_variant;AKAP11|p.H747Tfs*7|1|0.07|ENSG00000023516|chr13:42300981-42300981|T/-|frameshift_variant;AKAP11|p.N964Mfs*17|1|0.38|ENSG00000023516|chr13:42301633-42301633|A/-|frameshift_variant;AKAP11|p.S919Pfs*33|1|0.11|ENSG00000023516|chr13:42301498-42301498|T/-|frameshift_variant;ENSG00000023516|ENST00000025301|AKAP11	71.87747018426188	0.13267044672804276	6				NaN	NaN	0	NaN	11588	3878	15464
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15469	39.192	NaN	6735.6	30	0	378.44	0.106	+			50472	YAFPKAVSV	9	73	491.2733518249515	980.532150716703	2	491.27362060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YAFPKAVSV_	ENSG00000141526|ENST00000582743|SLC16A3;ENST00000579572.1_1_17:80193878-80195110:+|nuORF;ENST00000581642.1_1_17:80193878-80194172:+|nuORF;ENST00000584781.5_1_17:80193878-80195055:+|nuORF	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	11589	3878	15464
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15470	39.194	NaN	3802.5	30	0	676.01	0.034			+	25688	LRHPLTRA	8	63	482.29637571452326	962.5781984958466	2	482.2967224121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LRHPLTRA_	REV__ENST00000480290.5_1_7:127991288-127999229:-|nuORF;REV__nc|ENSG00000224940|C9JH25-2|PRRT4	30.503639358989545	0.7238069182250283	6				NaN	NaN	0	NaN	11590	3878	15464
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15471	39.194	NaN	2017.1	30	0	150.92	0.143			+	-1	ECESSNAMKY	10	66	617.741113601788	1233.467674270376	2	617.7417602539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C),Oxidation (M)	_EC(Carbamidomethyl (C))ESSNAM(Oxidation (M))KY_	REV__ENSG00000169064|ENST00000675490|ZBBX;REV__nc|ENSG00000169064|A8MT70-3|ZBBX;REV__nc|ENSG00000169064|A8MT70|ZBBX	34.172542307311794	0.6007644933930345	6				NaN	NaN	0	NaN	11591	3878	15464
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15484	39.224	NaN	10484	30	0	2092.1	0.214	+			18688	ITAVTVNQSL	10	67	523.2973854207228	1044.5802179082455	2	523.2981567382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ITAVTVNQSL_	CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000425226.1_1_2:203706028-203706388:-|nuORF;ENST00000550170.5_1_12:53294858-53298765:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	142.36107225718385	0.01012457621782354	6				NaN	NaN	0	NaN	11601	3881	15483
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15485	39.227	NaN	2038.6	30	0	356.62	0.106				-1	FPWPCQHHCF	10	65	679.7810229567816	1357.5474929803631	2	679.7789306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_FPWPC(Carbamidomethyl (C))QHHCF_	ENST00000501122.2_1_11:65211061-65211343:+|nuORF	27.882242232435846	0.6521336255503853	6				NaN	NaN	0	NaN	11602	3881	15483
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15486	39.229	NaN	5875.6	30	0	1018.6	0.106	+			28392	NENRTCTC	8	62	470.6837552116208	939.3529574900416	2	470.6845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NENRTCTC_	ENSG00000138336|ENST00000373644|TET1;nc|ENSG00000138336|Q8NFU7-2|TET1;nc|ENSG00000138336|Q8NFU7-3|TET1	30.503639358989545	0.7238069182250283	6				NaN	NaN	0	NaN	11603	3881	15483
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15487	39.231	NaN	2326.6	30	0	206.46	0.106	+			11484	FPAGKVPAF	9	58	467.262586820659	932.510620708118	2	467.2627258300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FPAGKVPAF_	EEF1G|p.R51C|1|0.3|ENSG00000254772|chr11:62572604-62572604|G/A|missense_variant;ENSG00000254772|ENST00000329251|EEF1G;ENST00000526409.5_1_11:62327153-62342310:-|nuORF;nc|ENSG00000254772|P26641-2|EEF1G	50.0245360154114	0.3026755932229825	6				NaN	NaN	0	NaN	11604	3881	15483
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15488	39.233	NaN	3498.3	30	0	1170.2	0.106			+	35729	SDNIFKLRIF	10	42	418.23925999467394	1251.695950584222	3	418.239501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SDNIFKLRIF_	REV__ENST00000366644.3_1_1:231475179-231480431:+|nuORF	29.170058357718403	0.6416167986984785	6				NaN	NaN	0	NaN	11605	3881	15483
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15489	39.235	NaN	2905.9	30	0	273.44	0.035	+			23865	LDESLQKKA	9	68	516.2904923803878	NaN	0	516.2901611328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LDESLQKKA_	ENSG00000121207|ENST00000336356|LRAT	49.44154591367651	0.21054156626303966	6				NaN	NaN	0	NaN	11606	3881	15483
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15490	39.235	NaN	2135.3	30	0	208.04	0.141	+			8235	EAFHCISSF	9	67	549.2389251747405	1096.463297416281	2	549.2396240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_EAFHC(Carbamidomethyl (C))ISSF_	ENSG00000197044|ENST00000357901|ZNF441;nc|ENSG00000197044|Q8N8Z8-2|ZNF441	44.116797842482775	0.37197099687881774	6				NaN	NaN	0	NaN	11607	3881	15483
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15504	39.266	NaN	27005	30	0	3592.2	0.214	+			45311	TVSDAILRY	9	84	519.2841978371614	1036.5538427411227	2	519.285400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVSDAILRY_	ENSG00000002919|ENST00000359238|SNX11;nc|ENSG00000002919|Q9Y5W9-2|SNX11	168.25843898104137	0.0030641937004078144	6				NaN	NaN	0	NaN	11618	3884	15503
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15505	39.27	NaN	4330.2	30	0	806	0.106				-1	 	0	55	442.28361257682195	882.5526722204439	2	442.2840270996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11619	3884	15503
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15506	39.272	NaN	3211.1	30	0	562.9	0.106	+			7147	DAEGKVIGL	9	61	451.2521774829622	900.4898020327245	2	451.252685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DAEGKVIGL_	CDCA2|p.N847Mfs*14|1|0.15|ENSG00000184661|chr8:25507200-25507200|A/-|frameshift_variant;ENSG00000184661|ENST00000330560|CDCA2	53.351449002276354	0.2690372970092375	6				NaN	NaN	0	NaN	11620	3884	15503
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15507	39.273	NaN	2832.9	30	0	169.27	0.106	+			9716	EMMKVVQVY	9	67	563.7843016458314	1125.5540503584627	2	563.7850952148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EMMKVVQVY_	ENSG00000197323|ENST00000358465|TRIM33;ENST00000478032.1_1_1:114940480-114942198:-|nuORF	90.77665401227738	0.06267569666681755	6				NaN	NaN	0	NaN	11621	3884	15503
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15508	39.275	NaN	2827.9	30	0	201.73	0.106	+			7133	DAATYQVTY	9	67	516.2371676600395	1030.459782386879	2	516.2379760742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DAATYQVTY_	ENSG00000117620|ENST00000533028|SLC35A3;nc|ENSG00000283761|Q9Y2D2-2|SLC35A3;nc|ENSG00000283761|Q9Y2D2-3|SLC35A3	41.42661286455405	0.403525789677298	6				NaN	NaN	0	NaN	11622	3884	15503
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15509	39.277	NaN	3164.7	30	0	243.91	0.037			+	36798	SIDKFRDIGA	10	67	561.3023442588227	1120.5901355844453	2	561.3041381835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SIDKFRDIGA_	REV__tr|U7SKA1|U7SKA1_FUSNUIroncomplextransportsystemsubstrate-bindingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02156PE=4SV=1	49.536043120802724	0.461275219792494	6				NaN	NaN	0	NaN	11623	3884	15503
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15510	39.278	NaN	2122.8	30	0	680.25	0.141	+			47026	VLCEVCWTY	9	70	558.2494658677778	NaN	0	558.2495727539062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VLCEVCWTY_	ENST00000561529.1_1_16:71599967-71606118:+|nuORF	40.5726180659479	0.27166212580479165	6				NaN	NaN	0	NaN	11624	3884	15503
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15525	39.311	NaN	282580	30	0	72848	0.16	+			37144	SITSVFITK	9	85	498.2917112602033	994.5688695872066	2	498.29254150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SITSVFITK_	ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;TRRAP-ASNS|1|fusion;TRRAP-ASNS|2|fusion;TRRAP|p.K3443Sfs*19|1|0.28|ENSG00000196367|chr7:99004246-99004246|A/-|frameshift_variant	168.25843898104137	0.0030641937004078144	6				NaN	NaN	0	NaN	11636	3887	15524
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15526	39.314	NaN	6493.7	30	0	1132.9	0.106	+			37661	SLQVGPDSAI	10	69	493.76099553396733	985.5074381347347	2	493.760986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLQVGPDSAI_	CDH19|p.P710Rfs*20|1|0.25|ENSG00000071991|chr18:66505004-66505004|A/-|frameshift_variant;ENSG00000071991|ENST00000262150|CDH19	69.6276240434122	0.2803623802747859	6				NaN	NaN	0	NaN	11637	3887	15524
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15527	39.316	NaN	4351	30	0	437.12	0.106	+			12519	GEEWKGYVV	9	70	533.7633490752414	1065.5121452172828	2	533.7637329101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEEWKGYVV_	ENSG00000137154|ENST00000380394|RPS6;ENST00000397390.3_1_9:19200870-19200993:-|nuORF;ENST00000497406.2_1_12:59414000-59414099:+|nuORF	42.86426827375447	0.38666266728046506	6				NaN	NaN	0	NaN	11638	3887	15524
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15528	39.318	NaN	6736.6	30	0	1069.8	0.106			+	6996	CRGACLLKP	9	67	509.2708475659878	1016.5271421987757	2	509.2718200683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_C(Carbamidomethyl (C))RGACLLKP_	REV__nc|ENSG00000183597|Q6ICL3-4|TANGO2;REV__nc|ENSG00000183597|Q6ICL3-6|TANGO2	51.33545320467046	0.2872990594074956	6				NaN	NaN	0	NaN	11639	3887	15524
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15529	39.319	NaN	2716.2	30	0	202.86	0.106	+			18505	ISIGQLVSL	9	59	465.2865388054832	NaN	0	465.2867736816406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ISIGQLVSL_	CFTR|p.E1044Dfs*20|1|0.04|ENSG00000001626|chr7:117610661-117610662|-/TCAAAGAAAAC|frameshift_variant;CFTR|p.G1208Afs*3|1|0.3|ENSG00000001626|chr7:117627672-117627672|G/-|frameshift_variant;CFTR|p.L1258Ffs*7|1|0.26|ENSG00000001626|chr7:117642487-117642488|-/T|frameshift_variant;CFTR|p.S1297Lfs*31|1|0.28|ENSG00000001626|chr7:117652852-117652852|T/-|frameshift_variant;ENSG00000001626|ENST00000003084|CFTR;nc|ENSG00000001626|P13569-2|CFTR;nc|ENSG00000001626|P13569-3|CFTR	79.71258880314673	0.07236858429579222	6				NaN	NaN	0	NaN	11640	3887	15524
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15530	39.321	NaN	2226.3	30	0	267.13	0.106				-1	TAGMLKTIN	9	68	482.7593713582981	NaN	0	482.7583312988281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_TAGM(Oxidation (M))LKTIN_	ENSG00000149256|ENST00000278550|TENM4;TENM4|p.R2689Gfs*41|1|0.3|ENSG00000149256|chr11:78658303-78658303|G/-|frameshift_variant	30.317721548370564	0.32449924987115025	6				NaN	NaN	0	NaN	11641	3887	15524
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15531	39.323	NaN	2837.3	30	0	337.33	0.037	+			49982	WAIKHQTSVS	10	71	578.8101869221135	1155.605820911027	2	579.796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_WAIKHQTSVS_	ENSG00000198028|ENST00000301480|ZNF560	40.77816245573522	0.5419747034533848	6				NaN	NaN	0	NaN	11642	3887	15524
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15549	39.357	NaN	7668.3	30	0	3501.8	0.214	+			11305	FKSYAGEKI	9	67	521.7813218815537	1041.5480908299073	2	521.781982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FKSYAGEKI_	ENSG00000113810|ENST00000357388|SMC4;ENST00000468653.5_1_3:160117521-160130242:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4;SMC4|p.D465Efs*32|1|0.12|ENSG00000113810|chr3:160416372-160416373|-/GCATACATCTT|frameshift_variant;SMC4|p.K628Nfs*23|1|0.11|ENSG00000113810|chr3:160420762-160420762|A/-|frameshift_variant	70.39856735676683	0.13906523160059378	6				NaN	NaN	0	NaN	11657	3890	15548
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15550	39.361	NaN	9427.5	30	0	1087.9	0.106	+			28258	NDIVVKVL	8	77	450.2807497827646	898.5469466323292	2	450.28125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NDIVVKVL_	ENSG00000166333|ENST00000299421|ILK;nc|ENSG00000166333|Q13418-2|ILK;nc|ENSG00000166333|Q13418-3|ILK	115.49404669440601	0.24099756539272307	6				NaN	NaN	0	NaN	11658	3890	15548
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15551	39.363	NaN	14772	30	0	3542.3	0.106	+			40873	SVFGTMPLK	9	72	490.2668176676881	978.5190824021762	2	490.2672119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVFGTMPLK_	ENSG00000151348|ENST00000533608|EXT2;nc|ENSG00000151348|Q93063-2|EXT2;nc|ENSG00000151348|Q93063-3|EXT2	87.69643885390035	0.07135982304947239	6				NaN	NaN	0	NaN	11659	3890	15548
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15552	39.365	NaN	3694.8	30	0	224.16	0.106	+			27664	MPSRQCVGF	9	70	541.2479512634164	1080.4813495936328	2	541.248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_MPSRQC(Carbamidomethyl (C))VGF_	ENST00000013125.8_1_14:50892643-50892694:-|nuORF	82.30502934623384	0.08758161712619916	6				NaN	NaN	0	NaN	11660	3890	15548
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15553	39.367	NaN	4001	30	0	646.34	0.106	+			16984	HPSFLQLLA	9	63	513.2903314732122	1024.5661100132243	2	513.2916870117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HPSFLQLLA_	ZNF292|p.D1450H|1|0.73|ENSG00000188994|chr6:87257977-87257977|G/C|missense_variant	34.172542307311794	0.4838870758800184	6				NaN	NaN	0	NaN	11661	3890	15548
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15554	39.368	NaN	3007.4	30	0	223.86	0.106				-1	MVLQNSGIVL	10	64	545.3009397535517	NaN	0	545.3005981445312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_M(Oxidation (M))VLQNSGIVL_	ENST00000255198.2_2_5:76374494-76374551:-|nuORF	40.77816245573522	0.36390427802201647	6				NaN	NaN	0	NaN	11662	3890	15548
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15555	39.37	NaN	2669.2	30	0	227.19	0.035			+	18705	ITEENALKL	9	63	515.7922711546901	1029.56998937618	2	515.7931518554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ITEENALKL_	REV__ENSG00000149488|ENST00000358864|TMC2;REV__nc|ENSG00000149488|Q8TDI7-3|TMC2;REV__TMC2|p.P719Tfs*4|1|0.36|ENSG00000149488|chr20:2617281-2617282|-/C|frameshift_variant	47.95952297671804	0.32689736945648856	6				NaN	NaN	0	NaN	11663	3890	15548
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15568	39.397	NaN	10626	30	0	2366.5	0.214	+			45619	TYQDIQNTI	9	68	548.2688134594403	1094.5230739856804	2	548.2699584960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TYQDIQNTI_	ENSG00000181222|ENST00000674977|POLR2A;nc|ENSG00000181222|P24928|POLR2A	132.757866228626	0.013877640931359021	6				NaN	NaN	0	NaN	11673	3893	15567
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15569	39.401	NaN	5093.7	30	0	939.13	0.106	+			4265	ATGFLEQLK	9	70	503.7799712913403	1005.5453896494806	2	503.7812805175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATGFLEQLK_	ENSG00000004866|ENST00000323984|ST7;ENST00000417919.5_3_7:116593594-116738680:+|nuORF;nc|ENSG00000004866|Q9NRC1-2|ST7;nc|ENSG00000004866|Q9NRC1-3|ST7;nc|ENSG00000004866|Q9NRC1-7|ST7;nc|ENSG00000004866|Q9NRC1|ST7	131.61620852596164	0.014413238321579053	6				NaN	NaN	0	NaN	11674	3893	15567
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15570	39.403	NaN	3885.1	30	0	510.85	0.106			+	7221	DAIVGLIVK	9	64	464.2968215019555	926.579090070711	2	464.2969665527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DAIVGLIVK_	REV__ENSG00000163053|ENST00000295190|SLC16A14;REV__nc|ENSG00000163053|Q7RTX9-2|SLC16A14	84.9155231211612	0.07920012719736333	6				NaN	NaN	0	NaN	11675	3893	15567
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15571	39.405	NaN	1966.4	30	0	280.81	0.106				-1	ISPANSHCIK	10	44	376.1932886266935	1125.5580364802806	3	376.19378662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_ISPANSHC(Carbamidomethyl (C))IK_	ENSG00000180269|ENST00000570682|GPR139	35.17822180527639	0.5925517082438457	6				NaN	NaN	0	NaN	11676	3893	15567
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15572	39.407	NaN	2396.5	30	0	365.77	0.106			+	30250	PSYAISLIFK	10	67	569.8295288085938	NaN	0	569.8295288085938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PSYAISLIFK_	REV__ENSG00000140395|ENST00000267973|SKIC8	34.08650109265054	0.3882526356989144	6				NaN	NaN	0	NaN	11677	3893	15567
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15573	39.408	NaN	3265	30	0	261.41	0.036	+			26327	LSWATILLSP	10	75	550.8205484445363	1099.6265439558724	2	550.822509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSWATILLSP_	ENSG00000160216|ENST00000291572|AGPAT3;ENST00000484865.1_1_21:45391291-45401085:+|nuORF;nc|ENSG00000160216|Q9NRZ7-2|AGPAT3;nc|ENSG00000160216|Q9NRZ7-3|AGPAT3	40.77816245573522	0.5419747034533848	6				NaN	NaN	0	NaN	11678	3893	15567
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15574	39.409	NaN	3195.4	30	0	267.25	0.146	+			51516	YVRPMQKEI	9	47	388.54510736235153	1162.6134926872546	3	388.5451354980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YVRPMQKEI_	PAPPA2|p.I1437V|1|0.32|ENSG00000116183|chr1:176765823-176765823|A/G|missense_variant	26.69291269510374	0.5537881896960711	6				NaN	NaN	0	NaN	11679	3893	15567
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15592	39.449	NaN	43763	30	0	11145	0.214				-1	 	0	83	513.2843177823357	1024.5540826314714	2	513.2848510742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11694	3896	15591
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15593	39.452	NaN	5203.1	30	0	347.09	0.106	+			30434	PYLISGSKF	9	72	506.27783364322823	1010.5411143532565	2	506.2789611816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PYLISGSKF_	ENSG00000135912|ENST00000392102|TTLL4;ENST00000465558.5_1_2:219610891-219612857:+|nuORF;ENST00000480929.1_1_2:219612227-219612548:+|nuORF;TTLL4|p.H753Y|1|0.07|ENSG00000135912|chr2:218747604-218747604|C/T|missense_variant	95.81516180277367	0.04847050768394289	6				NaN	NaN	0	NaN	11695	3896	15591
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15594	39.454	NaN	9214.3	30	0	2367.3	0.106				-1	 	0	77	508.7916884986536	1015.5688240641073	2	508.79217529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11696	3896	15591
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15595	39.456	NaN	5644.1	30	0	669.23	0.106	+			50394	YAAEYANAL	9	69	493.2342790904529	984.4540052477058	2	493.2347412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YAAEYANAL_	ENSG00000140274|ENST00000323030|DUOXA2	116.90359126533652	0.02307425081617795	6				NaN	NaN	0	NaN	11697	3896	15591
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15596	39.458	NaN	5518.2	30	0	412.48	0.106	+			51202	YPNVNIHNF	9	84	559.2745732052614	1116.5345934773227	2	559.2750854492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YPNVNIHNF_	ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1;SPTBN1|p.K503Rfs*24|1|0.06|ENSG00000115306|chr2:54626095-54626095|G/-|frameshift_variant	108.08749611321984	0.03094949498378333	6				NaN	NaN	0	NaN	11698	3896	15591
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15597	39.46	NaN	3773.7	30	0	296.78	0.037	+			25200	LMINSSQFSK	10	67	577.7963585835062	1153.5781642338122	2	577.7976684570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LMINSSQFSK_	ENSG00000267680|ENST00000693561|ZNF224;ENST00000591551.1_1_19:44610541-44612434:+|nuORF;ZNF224|p.K426Nfs*47|1|0.38|ENSG00000267680|chr19:44107434-44107434|A/-|frameshift_variant	44.377184641726394	0.5088115166961078	6				NaN	NaN	0	NaN	11699	3896	15591
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15598	39.46	NaN	5766.8	30	0	534.96	0.14	+			47462	VPVSVVSDSY	10	75	526.2681718135366	1050.521790693873	2	526.2693481445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VPVSVVSDSY_	ENSG00000105835|ENST00000222553|NAMPT;ENST00000491027.5_1_7:105903822-105925330:-|nuORF	84.9155231211612	0.16018353804806162	6				NaN	NaN	0	NaN	11700	3896	15591
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15613	39.494	NaN	17784	30	0	5358.1	0.214	+			10283	ETLWPWID	8	75	530.2606425653574	1058.5067321975148	2	530.2613525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ETLWPWID_	DST|p.K5076Nfs*24|1|0.31|ENSG00000151914|chr6:56472218-56472218|T/-|frameshift_variant;DST|p.T4428Nfs*23|1|0.12|ENSG00000151914|chr6:56497896-56497897|-/T|frameshift_variant;ENSG00000151914|ENST00000680361|DST;nc|ENSG00000151914|Q03001-14|DST;nc|ENSG00000151914|Q03001-8|DST;nc|ENSG00000151914|Q03001|DST	55.50420428727701	0.5462892107279674	6				NaN	NaN	0	NaN	11712	3899	15612
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15614	39.497	NaN	18020	30	0	4876.6	0.106	+			12078	GAAGVHFIY	9	80	467.7422571045344	933.4699612758689	2	467.74249267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GAAGVHFIY_	ENSG00000169813|ENST00000682386|HNRNPF	100.36016987692139	0.038834373944719155	6				NaN	NaN	0	NaN	11713	3899	15612
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15615	39.499	NaN	13254	30	0	1602.4	0.106	+			27183	MDSREHRPR	9	81	600.2889250623906	1198.5632971915811	2	600.290283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))DSREHRPR_	ENSG00000155506|ENST00000518297|LARP1;nc|ENSG00000155506|Q6PKG0-3|LARP1	47.657333605630114	0.33044192980041115	6				NaN	NaN	0	NaN	11714	3899	15612
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15616	39.501	NaN	10530	30	0	966.29	0.106				-1	 	0	84	519.2767734951786	518.2694970285786	1	519.2774658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11715	3899	15612
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15617	39.503	NaN	4448.9	30	0	763.71	0.106	+			2424	APEFVQAL	8	57	437.73680606302815	NaN	0	437.7369384765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_APEFVQAL_	ENSG00000113248|ENST00000231173|PCDHB15	79.9392285194092	1.7418937515398478	6				NaN	NaN	0	NaN	11716	3899	15612
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15618	39.505	NaN	8437.5	30	0	2198.6	0.034	+			39151	SSVPGVRLL	9	70	464.28421235752705	926.5538717818541	2	464.284423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSVPGVRLL_	ENSG00000026025|ENST00000544301|VIM;ENST00000485947.1_1_10:17271421-17272784:+|nuORF;VIM|p.R71W|1|0.4|ENSG00000026025|chr10:17229633-17229633|C/T|missense_variant	69.6276240434122	0.14239879520340665	6				NaN	NaN	0	NaN	11717	3899	15612
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15619	39.505	NaN	3652.6	30	0	326.15	0.141	+			11570	FPMEIRQY	8	79	542.2672649027223	1082.5199768722446	2	542.2686157226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FPMEIRQY_	ENSG00000115415|ENST00000361099|STAT1;nc|ENSG00000115415|P42224-2|STAT1;STAT1|p.D534Mfs*14|1|0.24|ENSG00000115415|chr2:190980653-190980653|G/-|frameshift_variant;STAT1|p.K567Nfs*25|2|0.2|ENSG00000115415|chr2:190979798-190979798|T/-|frameshift_variant	39.252832667884924	0.6609488554722044	6				NaN	NaN	0	NaN	11718	3899	15612
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15633	39.537	NaN	23070	30	0	6704.8	0.214	+			9657	ELSPCALLNGG	11	90	537.2681754773869	1072.5217980215737	2	537.26904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ELSPCALLNGG_	ENSG00000168702|ENST00000389484|LRP1B;LRP1B|p.C2682Vfs*15|1|0.3|ENSG00000168702|chr2:140516994-140516994|A/-|frameshift_variant;LRP1B|p.C3762Lfs*2|1|0.32|ENSG00000168702|chr2:140358089-140358090|-/A|frameshift_variant;LRP1B|p.G4130Mfs*20|1|0.06|ENSG00000168702|chr2:140324019-140324020|-/AT|frameshift_variant;LRP1B|p.H4368Tfs*4|1|0.47|ENSG00000168702|chr2:140274465-140274465|C/-|frameshift_variant;LRP1B|p.I3028Nfs*2|1|0.39|ENSG00000168702|chr2:140492645-140492646|-/T|frameshift_variant;LRP1B|p.K2543Nfs*42|1|0.08|ENSG00000168702|chr2:140536594-140536594|T/-|frameshift_variant;LRP1B|p.N3100Kfs*6|1|0.21|ENSG00000168702|chr2:140485468-140485469|-/T|frameshift_variant;LRP1B|p.N3434Tfs*84|1|0.47|ENSG00000168702|chr2:140442617-140442617|T/-|frameshift_variant;LRP1B|p.N4135Mfs*14|1|0.13|ENSG00000168702|chr2:140324003-140324003|T/-|frameshift_variant;LRP1B|p.R3957Kfs*11|2|0.15|ENSG00000168702|chr2:140350819-140350820|-/T|frameshift_variant;LRP1B|p.T2640Pfs*5|1|0.12|ENSG00000168702|chr2:140525952-140525952|T/-|frameshift_variant;LRP1B|p.Y3120*|1|0.16|ENSG00000168702|chr2:140485402-140485408|AGTAGGG/-|frameshift_variant	49.536043120802724	0.4274608637932522	6				NaN	NaN	0	NaN	11729	3902	15632
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15634	39.54	NaN	7416.4	30	0	898.36	0.106	+			15656	GVLSDINLK	9	72	479.7813038500249	957.5480547668499	2	479.7818908691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GVLSDINLK_	ENSG00000173848|ENST00000355029|NET1;ENST00000484741.1_1_10:5496419-5498268:+|nuORF;nc|ENSG00000173848|Q7Z628-2|NET1;NET1|p.I346M|1|0.08|ENSG00000173848|chr10:5454959-5454959|A/G|missense_variant	87.69643885390035	0.07135982304947239	6				NaN	NaN	0	NaN	11730	3902	15632
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15635	39.542	NaN	8711.2	30	0	478.85	0.106	+			37982	SPIDVVEKY	9	80	525.2794501601842	1048.5443473871683	2	525.279541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SPIDVVEKY_	ENSG00000117153|ENST00000367261|KLHL12;nc|ENSG00000117153|Q53G59-2|KLHL12	123.20810148215591	0.019257656778428764	6				NaN	NaN	0	NaN	11731	3902	15632
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15636	39.544	NaN	5636.2	30	0	386.15	0.106	+			14037	GSGNYNDFGNY	11	76	604.2354819314911	1206.4564109297821	2	604.236572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GSGNYNDFGNY_	ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1	104.42354056486148	0.051542069836817306	6				NaN	NaN	0	NaN	11732	3902	15632
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15637	39.546	NaN	5519.5	30	0	925.76	0.106			+	-1	LCIRPYVF	8	69	534.2900068547967	1066.5654607763934	2	534.2918090820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_LC(Carbamidomethyl (C))IRPYVF_	REV__REEP6|p.A67Rfs*348|1|0.06|ENSG00000115255|chr19:1495372-1495373|-/C|frameshift_variant	60.403631409065575	0.49778558673058804	6				NaN	NaN	0	NaN	11733	3902	15632
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15638	39.548	NaN	2210.9	30	0	551.36	0.037			+	22227	KSWVLDGVNY	10	66	590.8029917431277	1179.5914305530553	2	590.803955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KSWVLDGVNY_	REV__ENSG00000109685|ENST00000508803|NSD2;REV__ENST00000508355.5_1_4:1902372-1920392:+|nuORF;REV__nc|ENSG00000109685|O96028-3|NSD2;REV__nc|ENSG00000109685|O96028-5|NSD2;REV__nc|ENSG00000109685|O96028-6|NSD2;REV__nc|ENSG00000109685|O96028-7|NSD2	52.936696900407355	0.4300801048568001	6				NaN	NaN	0	NaN	11734	3902	15632
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15639	39.548	NaN	3624.8	30	0	569.91	0.141			+	-1	SPSQNGCLIM	10	75	561.7494201628368	1121.4842873924736	2	561.75048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C),Oxidation (M)	_SPSQNGC(Carbamidomethyl (C))LIM(Oxidation (M))_	REV__ENSG00000092148|ENST00000399332|HECTD1;REV__ENST00000557695.1_1_14:31572066-31574703:-|nuORF	42.396135135203025	0.5270658956260207	6				NaN	NaN	0	NaN	11735	3902	15632
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15656	39.585	NaN	30042	30	0	2633.5	0.214	+			42193	TAADIFKQY	9	82	528.7713872283449	1055.5282215234897	2	528.7720336914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAADIFKQY_	ENSG00000101972|ENST00000371145|STAG2;nc|ENSG00000101972|Q8N3U4|STAG2;STAG2|p.T1208Kfs*3|1|0.87|ENSG00000101972|chrX:124095400-124095400|C/-|frameshift_variant	167.22876102047192	0.0032399547248545047	6				NaN	NaN	0	NaN	11749	3905	15655
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15657	39.589	NaN	6377.1	30	0	1223	0.106	+			46533	VFAEKITSL	9	64	504.2924979959602	1006.5704430587205	2	504.2927551269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VFAEKITSL_	CDR2|p.T201Qfs*2|1|0.34|ENSG00000140743|chr16:22347729-22347729|T/-|frameshift_variant;ENSG00000140743|ENST00000268383|CDR2	65.15724298150197	0.17062369902793603	6				NaN	NaN	0	NaN	11750	3905	15655
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15658	39.591	NaN	4116.8	30	0	545.58	0.106			+	44612	TTDTSYAFVT	10	69	553.2548612257552	1104.4951695183104	2	553.2554931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TTDTSYAFVT_	REV__tr|U7SLW4|U7SLW4_FUSNUAutotransporterdomain-containingprotein(Fragment)OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01912PE=4SV=1	40.77816245573522	0.5419747034533848	6				NaN	NaN	0	NaN	11751	3905	15655
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15659	39.593	NaN	2196.4	30	0	265.47	0.106	+			13825	GQREGSCM	8	58	470.6837552116208	939.3529574900416	2	470.6840515136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_GQREGSC(Carbamidomethyl (C))M(Oxidation (M))_	ENSG00000187147|ENST00000361799|RNF220;ENST00000474064.5_1_1:45098020-45115698:+|nuORF;ENST00000475378.5_1_1:45097966-45116444:+|nuORF	40.5726180659479	0.6527593143185008	6				NaN	NaN	0	NaN	11752	3905	15655
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15660	39.594	NaN	3341.3	30	0	385.62	0.106	+			212	AALQELLSK	9	73	486.78940150731376	NaN	0	486.7894287109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AALQELLSK_	ENSG00000118181|ENST00000527673|RPS25	78.26377905018397	0.07733306720594871	6				NaN	NaN	0	NaN	11753	3905	15655
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15661	39.596	NaN	2965.2	30	0	603.89	0.106			+	24781	LIFANKVY	8	59	484.28370714396584	966.5528613547317	2	484.28387451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LIFANKVY_	REV__ENSG00000203734|ENST00000541398|ECT2L	40.5726180659479	0.6527593143185008	6				NaN	NaN	0	NaN	11754	3905	15655
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15662	39.598	NaN	6867	30	0	493.81	0.035	+			1393	AEVPLPSPVQ	10	74	518.7867776079402	1035.5590022826802	2	518.7899169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AEVPLPSPVQ_	ENST00000413916.5_1_7:44807392-44807602:+|nuORF	45.97224482568171	0.49411383603842696	6				NaN	NaN	0	NaN	11755	3905	15655
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15673	39.623	NaN	9933.4	30	0	1468.4	0.214			+	51387	YTMKLHKF	8	87	534.2900068547967	1066.5654607763934	2	534.2909545898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YTMKLHKF_	REV__AGO4|p.E724Kfs*16|1|0.24|ENSG00000134698|chr1:35841744-35841745|AG/-|frameshift_variant;REV__ENSG00000134698|ENST00000373210|AGO4	55.50420428727701	0.5462892107279674	6				NaN	NaN	0	NaN	11763	3908	15672
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15674	39.627	NaN	6783.5	30	0	513.49	0.106	+			11573	FPMRYLPL	8	77	518.7867776079402	1035.5590022826802	2	518.7881469726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FPMRYLPL_	ENSG00000139826|ENST00000375898|ABHD13	38.80614096846853	0.6637206697844082	6				NaN	NaN	0	NaN	11764	3908	15672
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15675	39.629	NaN	5129.8	30	0	1193.5	0.106			+	-1	DGARLSNM	8	52	440.20289649188527	878.3912400505706	2	440.203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_DGARLSNM(Oxidation (M))_	REV__nc|ENSG00000211942|P01766|IGHV3-13	53.351449002276354	0.5676011784961348	6				NaN	NaN	0	NaN	11765	3908	15672
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15676	39.631	NaN	2866	30	0	221.4	0.106	+			13443	GLIATTLAIA	10	64	472.2943722915027	942.5741916498055	2	472.29443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GLIATTLAIA_	ENSG00000163751|ENST00000296046|CPA3	38.80614096846853	0.5601458937078225	6				NaN	NaN	0	NaN	11766	3908	15672
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15677	39.633	NaN	1760.8	30	0	352.33	0.106	+			12583	GEHGIVVF	8	45	429.22899414000926	856.4434353468185	2	429.22943115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GEHGIVVF_	ENSG00000167165|ENST00000305139|UGT1A6;ENSG00000241119|ENST00000354728|UGT1A9;ENSG00000241635|ENST00000305208|UGT1A1;ENSG00000242366|ENST00000373450|UGT1A8;ENSG00000242515|ENST00000344644|UGT1A10;ENSG00000244122|ENST00000373426|UGT1A7;ENSG00000244474|ENST00000373409|UGT1A4;nc|ENSG00000167165|P19224-2|UGT1A6;nc|ENSG00000167165|P19224-3|UGT1A6;nc|ENSG00000241119|O60656-2|UGT1A9;nc|ENSG00000241635|P22309-2|UGT1A1;nc|ENSG00000242366|Q9HAW9-2|UGT1A8;nc|ENSG00000242515|Q9HAW8-2|UGT1A10;nc|ENSG00000244122|Q9HAW7-2|UGT1A7;nc|ENSG00000244474|P22310-2|UGT1A4;nc|ENSG00000288702|P35503-3|UGT1A3;nc|ENSG00000288702|P35503|UGT1A3;nc|ENSG00000288705|P35504-2|UGT1A5;nc|ENSG00000288705|P35504|UGT1A5	35.200714571348534	0.6875396545722289	6				NaN	NaN	0	NaN	11767	3908	15672
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15678	39.634	NaN	3661.9	30	0	430.81	0.036			+	26758	LVPLSFQLSP	10	69	550.8205484445363	1099.6265439558724	2	550.822509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LVPLSFQLSP_	REV__ENST00000512322.1_1_4:79570833-79602211:+|nuORF	39.252832667884924	0.5560298534376815	6				NaN	NaN	0	NaN	11768	3908	15672
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15679	39.635	NaN	2448.7	30	0	417.29	0.145	+			48324	VTFRKILSH	9	42	367.5569629597443	1099.649059479433	3	367.55731201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VTFRKILSH_	ENSG00000144559|ENST00000455809|TAMM41;ENST00000494388.1_1_3:11885478-11888134:-|nuORF;nc|ENSG00000144559|Q96BW9-2|TAMM41;nc|ENSG00000144559|Q96BW9|TAMM41	23.52269567125451	0.5834155526130771	6				NaN	NaN	0	NaN	11769	3908	15672
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15693	39.666	NaN	6739.4	30	0	745	0.214	+			26611	LTYNDFINK	9	79	564.2900493799017	1126.5655458266033	2	564.291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LTYNDFINK_	ENSG00000077097|ENST00000264331|TOP2B;ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000077097|Q02880-2|TOP2B;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A;TOP2A|p.K1199Efs*11|1|0.23|ENSG00000131747|chr17:40396408-40396409|-/C|frameshift_variant;TOP2A|p.T1205Hfs*19|4|0.35|ENSG00000131747|chr17:40396390-40396390|T/-|frameshift_variant;TOP2B|p.S1441Kfs*20|1|0.32|ENSG00000077097|chr3:25606099-25606100|-/T|frameshift_variant;TOP2B|p.S1441Vfs*41|4|0.13|ENSG00000077097|chr3:25606100-25606100|T/-|frameshift_variant;TOP2B|p.S1476Ffs*11|2|0.3|ENSG00000077097|chr3:25604822-25604823|-/A|frameshift_variant	106.68306549817024	0.032382560583716295	6				NaN	NaN	0	NaN	11780	3911	15692
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15694	39.67	NaN	9684.6	30	0	1385.5	0.106	+			36339	SESSLALRL	9	65	488.27670811315454	974.5388632931091	2	488.2777404785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SESSLALRL_	DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;DMBT1|p.H1721Tfs*24|1|0.2|ENSG00000187908|chr10:122621316-122621316|C/-|frameshift_variant;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;ENSG00000187908|ENST00000338354|DMBT1;nc|ENSG00000187908|Q9UGM3-2|DMBT1;nc|ENSG00000187908|Q9UGM3-2|DMBT1;nc|ENSG00000187908|Q9UGM3-2|DMBT1;nc|ENSG00000187908|Q9UGM3-2|DMBT1;nc|ENSG00000187908|Q9UGM3-2|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3-4|DMBT1;nc|ENSG00000187908|Q9UGM3-4|DMBT1;nc|ENSG00000187908|Q9UGM3-4|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;nc|ENSG00000187908|Q9UGM3-8|DMBT1;nc|ENSG00000187908|Q9UGM3-8|DMBT1;nc|ENSG00000187908|Q9UGM3-8|DMBT1;nc|ENSG00000187908|Q9UGM3-8|DMBT1;nc|ENSG00000187908|Q9UGM3-9|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1	139.97047562133406	0.010493916756945389	6				NaN	NaN	0	NaN	11781	3911	15692
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15695	39.672	NaN	5370.5	30	0	980.59	0.106	+			37145	SITSVFITK	9	76	498.2917112602033	994.5688695872066	2	498.2923583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SITSVFITK_	ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;TRRAP-ASNS|1|fusion;TRRAP-ASNS|2|fusion;TRRAP|p.K3443Sfs*19|1|0.28|ENSG00000196367|chr7:99004246-99004246|A/-|frameshift_variant	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	11782	3911	15692
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15696	39.674	NaN	2787.8	30	0	199.83	0.106	+			26	AAAIKALEL	9	71	450.2807497827646	898.5469466323292	2	450.77972412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AAAIKALEL_	ENSG00000114062|ENST00000648336|UBE3A;nc|ENSG00000114062|Q05086-2|UBE3A;nc|ENSG00000114062|Q05086|UBE3A;UBE3A|p.K226Nfs*2|1|0.34|ENSG00000114062|chr15:25371505-25371505|T/-|frameshift_variant;UBE3A|p.N105Tfs*7|1|0.35|ENSG00000114062|chr15:25375523-25375523|G/-|frameshift_variant	54.776311868738084	0.25715957988447635	6				NaN	NaN	0	NaN	11783	3911	15692
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15697	39.676	NaN	3128.6	30	0	339.65	0.106			+	-1	MGGPRVDN	8	48	431.1978195040365	860.381086074873	2	431.1980895996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_M(Oxidation (M))GGPRVDN_	REV__MEGF6|p.R1079Gfs*195|1|0.36|ENSG00000162591|chr1:3498488-3498488|G/-|frameshift_variant	53.351449002276354	0.5676011784961348	6				NaN	NaN	0	NaN	11784	3911	15692
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15698	39.677	NaN	5006.3	30	0	480.46	0.106			+	9548	ELEKKNAE	8	60	480.75394164039784	959.4933303475957	2	480.7545471191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ELEKKNAE_	REV__ENST00000509378.1_1_4:165110937-165111516:+|nuORF	79.45101966838831	0.3281480470254892	6				NaN	NaN	0	NaN	11785	3911	15692
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15699	39.679	NaN	2353.4	30	0	194.31	0.033			+	26837	LVTVQLVI	8	52	442.793950116999	883.573347300798	2	442.79425048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LVTVQLVI_	REV__ENST00000331113.8_1_7:120381633-120387745:+|nuORF	73.97473282117947	0.3737790450121076	6				NaN	NaN	0	NaN	11786	3911	15692
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15714	39.711	NaN	8619.5	30	0	943.29	0.214	+			45151	TVLQYVVGR	9	78	517.802570221224	1033.5905875092478	2	517.8037719726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVLQYVVGR_	ENSG00000155561|ENST00000285968|NUP205;NUP205|p.S1260N|1|0.36|ENSG00000155561|chr7:135618419-135618419|G/A|missense_variant	112.41091882917199	0.026537921851008135	6				NaN	NaN	0	NaN	11798	3914	15713
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15715	39.714	NaN	9374.6	30	0	2493.5	0.106				-1	 	0	57	433.7521843703366	865.4898158074732	2	433.7527770996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11799	3914	15713
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15716	39.716	NaN	5626	30	0	870.65	0.106			+	32060	QRWVVSFP	8	70	509.77724174355336	NaN	0	509.7773132324219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QRWVVSFP_	REV__FAM57B|p.L146F|1|0.35|ENSG00000149926|chr16:30026617-30026617|G/A|missense_variant	38.80614096846853	1.7418937515398478	6				NaN	NaN	0	NaN	11800	3914	15713
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15717	39.718	NaN	12189	30	0	1887.7	0.106	+			46515	VEVSIPAKL	9	70	478.29417112010054	954.5737893070011	2	478.29498291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VEVSIPAKL_	ENSG00000115677|ENST00000310931|HDLBP;ENST00000487169.5_1_2:242174673-242189369:-|nuORF;nc|ENSG00000115677|Q00341-2|HDLBP	112.41091882917199	0.026537921851008135	6				NaN	NaN	0	NaN	11801	3914	15713
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15718	39.72	NaN	4275.2	30	0	589.27	0.106			+	7950	DSLYGPQGTY	10	74	550.7482668515672	1099.4819807699344	2	550.7490844726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DSLYGPQGTY_	REV__ENSG00000198756|ENST00000361927|COLGALT2	65.46538089061403	0.31613324008013116	6				NaN	NaN	0	NaN	11802	3914	15713
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15719	39.722	NaN	3539.1	30	0	353.25	0.036	+			27819	MSPEGSPSKSP	11	67	552.2572377665152	1102.4999225998304	2	552.2577514648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MSPEGSPSKSP_	ENSG00000075340|ENST00000264436|ADD2	56.43379154798735	0.3552884390983883	6				NaN	NaN	0	NaN	11803	3914	15713
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15720	39.722	NaN	3005.9	30	0	149.57	0.141	+			13162	GGSYNDFGNY	10	62	547.2144061052148	1092.4142592772296	2	547.2158813476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GGSYNDFGNY_	chr12:54282611-54283827|482|82.07|0.0|22.97|+|2|HNRNPA1,HNRNPA1|1;chr12:54282641-54283827|483|320.26|0.0|24.93|+|2|HNRNPA1,HNRNPA1|1;chr12:54282662-54282800|482|460.96|0.0|25.46|+|ENST00000677249|HNRNPA1,HNRNPA1;chr12:54282662-54283827|481|547.88|0.0|25.71|+|2|HNRNPA1,HNRNPA1|1;chr12:54282820-54283827|481|25.33|0.0|21.27|+|2|HNRNPA1,HNRNPA1|1;chr12:54282823-54283827|481|40.36|0.0|21.94|+|2|HNRNPA1,HNRNPA1|1;chr12:54282841-54283827|477|44.72|0.0|22.09|+|2|HNRNPA1,HNRNPA1|1;chr12:54283132-54283827|480|49.51|0.0|22.24|+|2|HNRNPA1,HNRNPA1|1;chr12:54283225-54283827|478|34.15|0.0|21.7|+|2|HNRNPA1,HNRNPA1|1;chr12:54283228-54283827|474|19.73|0.0|20.91|+|2|HNRNPA1,HNRNPA1|1;ENSG00000135486|ENST00000340913|HNRNPA1;ENSG00000139675|ENST00000357495|HNRNPA1L2;ENSG00000224578|ENST00000565308|HNRNPA1L3;ENST00000429216.1_1_2:201928351-201928714:+|nuORF;ENST00000432375.1_1_6:32293532-32293889:+|nuORF;ENST00000450405.1_1_2:207284139-207284406:-|nuORF;ENST00000560893.1_1_15:35693406-35693832:+|nuORF;nc|ENSG00000135486|P09651-2|HNRNPA1;nc|ENSG00000135486|P09651-3|HNRNPA1	37.50817390946774	0.5721060100277453	6				NaN	NaN	0	NaN	11804	3914	15713
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15738	39.762	NaN	15931	30	0	8072.8	0.214				-1	 	0	57	353.57011968222974	1057.6885296468893	3	353.57049560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11819	3917	15737
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15739	39.765	NaN	12104	30	0	1376	0.106				-1	 	0	68	471.23937498427694	940.4641970353539	2	471.2397155761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11820	3917	15737
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15740	39.767	NaN	4625.3	30	0	428.83	0.106	+			42262	TAASLFKEM	9	66	499.25420971053563	996.4938664878713	2	499.2545471191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TAASLFKEM_	ENSG00000142507|ENST00000270586|PSMB6;ENST00000575643.1_1_17:4700983-4701328:+|nuORF	126.24258497203832	0.01742065577488747	6				NaN	NaN	0	NaN	11821	3917	15737
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15741	39.769	NaN	8898.8	30	0	758.2	0.106				-1	 	0	69	493.29944462987635	984.5843363265527	2	493.2996520996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11822	3917	15737
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15742	39.771	NaN	4590.9	30	0	370.23	0.106			+	29515	PDPQSLGDPL	10	77	519.7589645359382	1037.5033761386762	2	519.7592163085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PDPQSLGDPL_	REV__ENSG00000150750|ENST00000280325|POU2AF2	62.107414245175825	0.3466735403679669	6				NaN	NaN	0	NaN	11823	3917	15737
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15743	39.773	NaN	4920	30	0	756.16	0.034				-1	 	0	62	485.7994834592001	969.5844139852002	2	485.7995300292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11824	3917	15737
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15744	39.773	NaN	3813	30	0	416.52	0.139	+			45512	TYGGSWKF	8	68	473.226273902659	944.437994872118	2	473.2264404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TYGGSWKF_	AIG1|p.L42R|1|0.11|ENSG00000146416|chr6:143061050-143061050|T/G|missense_variant;ENSG00000146416|ENST00000357847|AIG1;nc|ENSG00000146416|Q9NVV5-1|AIG1;nc|ENSG00000146416|Q9NVV5-3|AIG1;nc|ENSG00000146416|Q9NVV5-4|AIG1;nc|ENSG00000146416|Q9NVV5-5|AIG1;nc|ENSG00000146416|Q9NVV5-6|AIG1	30.503639358989545	0.7238069182250283	6				NaN	NaN	0	NaN	11825	3917	15737
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15759	39.807	NaN	44543	30	0	6317.6	0.214	+			36619	SGFEGMFTK	9	77	502.2304488639244	1002.4463447946488	2	502.2312927246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SGFEGMFTK_	ENSG00000153201|ENST00000283195|RANBP2;ENSG00000153201|ENST00000283195|RANBP2;ENSG00000153201|ENST00000283195|RANBP2;RANBP2|p.C2737Vfs*35|1|0.18|ENSG00000153201|chr2:108772957-108772957|T/-|frameshift_variant;RANBP2|p.C2737Vfs*35|1|0.18|ENSG00000153201|chr2:108772957-108772957|T/-|frameshift_variant;RANBP2|p.C2737Vfs*35|1|0.18|ENSG00000153201|chr2:108772957-108772957|T/-|frameshift_variant;RANBP2|p.F3068Lfs*10|1|0.06|ENSG00000153201|chr2:108782692-108782692|T/-|frameshift_variant;RANBP2|p.F3068Lfs*10|1|0.06|ENSG00000153201|chr2:108782692-108782692|T/-|frameshift_variant;RANBP2|p.F3068Lfs*10|1|0.06|ENSG00000153201|chr2:108782692-108782692|T/-|frameshift_variant;RANBP2|p.H3114Sfs*18|1|0.33|ENSG00000153201|chr2:108782827-108782828|-/T|frameshift_variant;RANBP2|p.H3114Sfs*18|1|0.33|ENSG00000153201|chr2:108782827-108782828|-/T|frameshift_variant;RANBP2|p.H3114Sfs*18|1|0.33|ENSG00000153201|chr2:108782827-108782828|-/T|frameshift_variant;RANBP2|p.K1989Nfs*9|1|0.05|ENSG00000153201|chr2:108766505-108766506|-/TATCCTG|frameshift_variant;RANBP2|p.K1989Nfs*9|1|0.05|ENSG00000153201|chr2:108766505-108766506|-/TATCCTG|frameshift_variant;RANBP2|p.K1989Nfs*9|1|0.05|ENSG00000153201|chr2:108766505-108766506|-/TATCCTG|frameshift_variant;RANBP2|p.K2576Nfs*63|2|0.22|ENSG00000153201|chr2:108768262-108768262|A/-|frameshift_variant;RANBP2|p.K2576Nfs*63|2|0.22|ENSG00000153201|chr2:108768262-108768262|A/-|frameshift_variant;RANBP2|p.K2576Nfs*63|2|0.22|ENSG00000153201|chr2:108768262-108768262|A/-|frameshift_variant	155.5846463517096	0.005567437401040498	6				NaN	NaN	0	NaN	11837	3920	15758
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15760	39.81	NaN	47982	30	0	7923.7	0.106	+			40070	STNNWVLIK	9	90	537.799947149789	1073.5853413663779	2	537.8011474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STNNWVLIK_	ENSG00000065000|ENST00000643116|AP3D1;nc|ENSG00000065000|O14617-4|AP3D1;nc|ENSG00000065000|O14617|AP3D1	134.7655990226056	0.012935733000282069	6				NaN	NaN	0	NaN	11838	3920	15758
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15761	39.812	NaN	31003	30	0	8020.1	0.106				-1	 	0	85	546.7871307648163	1091.5597085964325	2	546.7882080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11839	3920	15758
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15762	39.814	NaN	8378.6	30	0	586.67	0.106	+			51203	YPNVNIHNF	9	87	559.2745732052614	1116.5345934773227	2	559.2754516601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YPNVNIHNF_	ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1;SPTBN1|p.K503Rfs*24|1|0.06|ENSG00000115306|chr2:54626095-54626095|G/-|frameshift_variant	120.62098272573253	0.020823834273767324	6				NaN	NaN	0	NaN	11840	3920	15758
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15763	39.816	NaN	5704.9	30	0	612.32	0.106	+			11093	FFEAKVQAL	9	72	526.79172561423	1051.56889829526	2	526.7928466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FFEAKVQAL_	ENSG00000115468|ENST00000264059|EFHD1;nc|ENSG00000115468|Q9BUP0-2|EFHD1	101.25262130126117	0.03792372629710479	6				NaN	NaN	0	NaN	11841	3920	15758
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15764	39.818	NaN	5937.7	30	0	638.42	0.035	+			17006	HPTDPLTSF	9	68	507.747576202372	1013.480599471544	2	507.7480163574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HPTDPLTSF_	ENSG00000130775|ENST00000373921|THEMIS2;nc|ENSG00000130775|Q5TEJ8-3|THEMIS2;nc|ENSG00000130775|Q5TEJ8-5|THEMIS2;nc|ENSG00000130775|Q5TEJ8-6|THEMIS2;THEMIS2|p.P552Hfs*28|1|0.28|ENSG00000130775|chr1:27882969-27882970|-/CC|frameshift_variant	90.36981228632155	0.0638227155548745	6				NaN	NaN	0	NaN	11842	3920	15758
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15765	39.818	NaN	6264.4	30	0	1201.7	0.142	+			28819	NPLKGDLANTF	11	75	595.31365286132	1188.6127527894398	2	595.3145751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NPLKGDLANTF_	ENSG00000138085|ENST00000380171|ATRAID;nc|ENSG00000138085|Q6UW56-2|ATRAID;nc|ENSG00000138085|Q6UW56-3|ATRAID	126.65837966889171	0.007381695019750835	6				NaN	NaN	0	NaN	11843	3920	15758
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15777	39.845	NaN	24504	30	0	7138.5	0.214	+			46585	VFPDKGYSF	9	81	530.2606425653574	1058.5067321975148	2	530.26123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VFPDKGYSF_	ENSG00000116001|ENST00000433529|TIA1;ENST00000477415.5_1_2:70443338-70451751:-|nuORF;ENST00000482876.5_1_2:70442329-70444102:-|nuORF;nc|ENSG00000116001|P31483-2|TIA1	42.86426827375447	0.38666266728046506	6				NaN	NaN	0	NaN	11852	3923	15776
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15778	39.849	NaN	8531.7	30	0	944.81	0.106			+	24701	LHFCKCKTY	9	80	600.2889250623906	1198.5632971915811	2	600.2901000976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LHFCKC(Carbamidomethyl (C))KTY_	REV__nc|ENSG00000268758|Q86SQ3|ADGRE4P	50.0245360154114	0.3026755932229825	6				NaN	NaN	0	NaN	11853	3923	15776
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15779	39.851	NaN	11566	30	0	1126	0.106	+			270	AAMYKSLEL	9	85	513.2698550146296	1024.525157096059	2	513.2706298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AAMYKSLEL_	ENSG00000273749|ENST00000617928|CYFIP1;KBTBD2-CYFIP1|1|fusion;nc|ENSG00000273749|Q7L576-2|CYFIP1	78.26377905018397	0.10505600812668463	6				NaN	NaN	0	NaN	11854	3923	15776
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15780	39.852	NaN	17927	30	0	2535.9	0.106			+	-1	YLIQTRDLC	9	76	591.302189837679	1180.5898267421578	2	591.8101806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_YLIQTRDLC(Carbamidomethyl (C))_	REV__ENST00000402802.7_1_7:537064-537175:-|nuORF	73.97473282117947	0.12360187025703594	6				NaN	NaN	0	NaN	11855	3923	15776
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15781	39.854	NaN	4518.7	30	0	544.68	0.106	+			50048	WEPSSQPTI	9	66	522.7525839580568	1043.4906149829135	2	522.7536010742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_WEPSSQPTI_	ENSG00000204525|ENST00000376228|HLA-C;ENST00000463348.5_1_6:30229165-30231201:+|nuORF;ENST00000470363.5_1_6:31237527-31238194:-|nuORF;ENST00000482052.5_1_6:30229165-30260340:+|nuORF;ENST00000487245.5_1_6:31236948-31239147:-|nuORF	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	11856	3923	15776
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15782	39.856	NaN	2206.8	30	0	146.04	0.036	+			10371	ETYRVEKAI	9	71	554.8040771484375	NaN	0	554.8040771484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ETYRVEKAI_	tr|U7STC5|U7STC5_FUSNUThreonine/serineexporter-likeN-terminaldomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01363PE=3SV=1	54.776311868738084	0.17377682019723872	6				NaN	NaN	0	NaN	11857	3923	15776
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15783	39.857	NaN	2996.6	30	0	274.72	0.14	+			44077	TPSVSMSQL	9	62	475.23576982812847	948.456986723057	2	475.236083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TPSVSMSQL_	ENST00000567704.5_1_15:78190746-78191211:+|nuORF	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	11858	3923	15776
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15800	39.893	NaN	16484	30	0	3418	0.214	+			28868	NPYRDLQIY	9	71	591.302189837679	1180.5898267421578	2	591.3010864257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NPYRDLQIY_	ENSG00000197879|ENST00000648651|MYO1C;MYO1C|p.V213Wfs*56|1|0.56|ENSG00000197879|chr17:1480877-1480877|G/-|frameshift_variant;nc|ENSG00000197879|O00159-2|MYO1C;nc|ENSG00000197879|O00159-3|MYO1C	104.0567914643314	0.03506238181059741	6				NaN	NaN	0	NaN	11872	3926	15799
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15801	39.897	NaN	2945.1	30	0	339.29	0.106	+			46536	VFALTQHTD	9	65	516.2612439992388	1030.5079350652775	2	516.2620239257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VFALTQHTD_	nc|ENSG00000149639|O94964-3|MTCL2	42.396135135203025	0.392153681582562	6				NaN	NaN	0	NaN	11873	3926	15799
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15802	39.899	NaN	3511.2	30	0	338.97	0.106	+			48016	VSQVRLRH	8	69	497.79998439562655	993.5854158580531	2	497.8000793457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSQVRLRH_	ENST00000536474.1_1_12:110173555-110173708:-|nuORF	44.116797842482775	0.6307669463330267	6				NaN	NaN	0	NaN	11874	3926	15799
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15803	39.901	NaN	3105.7	30	0	192.46	0.106			+	-1	EGFGCKHLLF	10	73	604.3005976912634	1206.5866424493267	2	604.3015747070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_EGFGC(Carbamidomethyl (C))KHLLF_	REV__ENST00000564648.1_1_16:85839106-85840477:+|nuORF;REV__ENST00000568339.5_1_16:85839106-85839475:+|nuORF	54.776311868738084	0.41334902933431344	6				NaN	NaN	0	NaN	11875	3926	15799
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15804	39.903	NaN	2464.6	30	0	436.17	0.106	+			11778	FSLSQWASVL	10	63	569.299790347609	1136.585027762018	2	569.8020629882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FSLSQWASVL_	ENST00000543406.1_1_11:60708255-60708741:-|nuORF	30.317721548370564	0.6322445173429027	6				NaN	NaN	0	NaN	11876	3926	15799
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15805	39.904	NaN	1790.5	30	0	156.97	0.106				-1	FSFSPRMPV	9	55	542.2672649027223	1082.5199768722446	2	542.2685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_FSFSPRM(Oxidation (M))PV_	BAZ2A|p.K1507Qfs*26|1|0.27|ENSG00000076108|chr12:56600770-56600771|-/G|frameshift_variant;BAZ2A|p.V772Sfs*9|1|0.34|ENSG00000076108|chr12:56606016-56606016|T/-|frameshift_variant;ENSG00000076108|ENST00000549884|BAZ2A;nc|ENSG00000076108|Q9UIF9-2|BAZ2A;nc|ENSG00000076108|Q9UIF9-3|BAZ2A;nc|ENSG00000076108|Q9UIF9|BAZ2A	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	11877	3926	15799
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15806	39.906	NaN	1249.2	30	0	112.8	0.033	+			26301	LSVIAQAF	8	42	424.7466745015456	847.4787960698912	2	424.7474670410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSVIAQAF_	ENSG00000004399|ENST00000324093|PLXND1;ENSG00000136040|ENST00000258526|PLXNC1;ENST00000504524.5_1_3:129275157-129277480:-|nuORF;ENST00000512744.5_2_3:129275157-129278574:-|nuORF;ENST00000549217.5_1_12:94694713-94697836:+|nuORF;PLXND1|p.A1793T|1|0.31|ENSG00000004399|chr3:129558496-129558496|C/T|missense_variant;PLXND1|p.T1897Rfs*17|1|0.06|ENSG00000004399|chr3:129556402-129556402|G/-|frameshift_variant	35.200714571348534	0.6875396545722289	6				NaN	NaN	0	NaN	11878	3926	15799
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15820	39.936	NaN	20539	30	0	3327.6	0.214				-1	 	0	76	521.7871484155199	1041.5597438978398	2	521.787841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11889	3929	15819
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15821	39.94	NaN	13227	30	0	2714.2	0.106			+	-1	KMDKSKSAY	9	79	537.2681754773869	1072.5217980215737	2	537.2689819335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_KM(Oxidation (M))DKSKSAY_	REV__TTC39C|p.E262K|1|0.47|ENSG00000168234|chr18:24080908-24080908|G/A|missense_variant	42.396135135203025	0.392153681582562	6				NaN	NaN	0	NaN	11890	3929	15819
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15822	39.941	NaN	3196.4	30	0	229.98	0.106			+	37499	SLLAIVSQM	9	58	481.2730972799908	960.5316416267816	2	481.272705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLLAIVSQM_	REV__ENSG00000168038|ENST00000301831|ULK4	82.24051045832904	0.08786059719216216	6				NaN	NaN	0	NaN	11891	3929	15819
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15823	39.943	NaN	4671.8	30	0	652.24	0.106	+			48117	VSVATGSFLI	10	65	497.2834813590522	992.5524097849044	2	497.2840881347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSVATGSFLI_	ENST00000381844.8_1_2:9724788-9724914:-|nuORF	40.77816245573522	0.5419747034533848	6				NaN	NaN	0	NaN	11892	3929	15819
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15824	39.945	NaN	3460	30	0	1481.9	0.106	+			37171	SIWRGLRDAW	10	55	420.56078287922725	1258.6605192378818	3	420.8958740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SIWRGLRDAW_	sp|C0H677|UL298_HCMVAProteinUL29/UL28OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL29PE=1SV=1;sp|P16847|UL28_HCMVAUncharacterizedproteinUL28OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL28PE=3SV=1;sp|Q6SWA3|UL298_HCMVMProteinUL29/28OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL29PE=3SV=2	27.047317107675042	0.6589519614906109	6				NaN	NaN	0	NaN	11893	3929	15819
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15825	39.947	NaN	3520	30	0	899.86	0.037			+	43971	TPEPRSGSPTD	11	68	572.2689390255975	1142.523325117995	2	572.2698364257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TPEPRSGSPTD_	REV__ENST00000592763.5_1_19:10787980-10789791:+|nuORF	35.15202426646627	0.6210751305041943	6				NaN	NaN	0	NaN	11894	3929	15819
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15826	39.948	NaN	715.54	30	0	35.866	0.138	+			18227	INLHELIST	9	36	347.19876575742074	NaN	0	347.1986999511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_INLHELIST_	ENST00000378230.7_1_1:3730493-3730565:-|nuORF	21.9598887501803	0.3626577482100488	6				NaN	NaN	0	NaN	11895	3929	15819
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15841	39.981	NaN	33519	30	0	4214.6	0.214				-1	 	0	81	490.2942933974492	978.5740338616985	2	490.2945861816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11907	3932	15840
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15842	39.984	NaN	13974	30	0	1592	0.106				-1	IWCIVLVL	8	88	508.304416983044	1014.594281032888	2	508.30517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_IWC(Carbamidomethyl (C))IVLVL_	ENSG00000197818|ENST00000361573|SLC9A8;nc|ENSG00000197818|Q9Y2E8-2|SLC9A8	54.89457262308372	0.5523244765420926	6				NaN	NaN	0	NaN	11908	3932	15840
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15843	39.986	NaN	5295	30	0	1188.8	0.106			+	47558	VRCSAQSE	8	58	440.20289649188527	878.3912400505706	2	440.20306396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VRCSAQSE_	REV__ENSG00000099331|ENST00000682292|MYO9B;REV__MYO9B|p.A2017Pfs*36|1|0.42|ENSG00000099331|chr19:17211760-17211760|G/-|frameshift_variant;REV__MYO9B|p.K1385Sfs*68|1|0.45|ENSG00000099331|chr19:17198220-17198220|A/-|frameshift_variant;REV__MYO9B|p.R2060Gfs*68|2|0.32|ENSG00000099331|chr19:17212009-17212009|C/-|frameshift_variant;REV__nc|ENSG00000099331|Q13459-2|MYO9B	53.351449002276354	0.5676011784961348	6				NaN	NaN	0	NaN	11909	3932	15840
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15844	39.988	NaN	6795.1	30	0	1106.5	0.106	+			24359	LFNGWENPG	9	74	517.2412418683612	1032.4679308035222	2	517.241943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LFNGWENPG_	ENST00000594883.1_1_19:57688295-57689024:+|nuORF	37.15910966729921	0.4535818937225704	6				NaN	NaN	0	NaN	11910	3932	15840
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15845	39.99	NaN	3675.9	30	0	406.01	0.106				-1	 	0	49	446.2315982228028	890.4486435124056	2	446.2314758300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11911	3932	15840
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15846	39.992	NaN	4378.6	30	0	323.2	0.035	+			18768	ITPLHDALN	9	75	497.2705909174238	992.5266289016477	2	497.2708740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ITPLHDALN_	ENSG00000160949|ENST00000409379|TONSL;ENST00000497613.2_1_8:145658938-145666334:-|nuORF;nc|ENSG00000160949|Q96HA7-2|TONSL	35.61828744233558	0.47037581924408073	6				NaN	NaN	0	NaN	11912	3932	15840
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15847	39.992	NaN	1617	30	0	103.54	0.142				-1	QLQKAHVMSV	10	71	578.8101869221135	1155.605820911027	2	578.81201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_QLQKAHVM(Oxidation (M))SV_	ENSG00000177047|ENST00000380229|IFNW1	32.81241826257853	0.6118718159329168	6				NaN	NaN	0	NaN	11913	3932	15840
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15863	40.028	NaN	97032	30	0	25679	0.184				-1	 	0	85	510.78941988367654	1019.5642868341531	2	510.7901916503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11926	3935	15862
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15864	40.031	NaN	11683	30	0	2434	0.106	+			47260	VMSATFAKF	9	73	501.25915718632837	1000.5037614394568	2	501.260009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VMSATFAKF_	ENSG00000077380|ENST00000397119|DYNC1I2;ENST00000435916.1_1_10:52025510-52026503:+|nuORF;ENST00000479806.1_1_2:172583261-172604396:+|nuORF;nc|ENSG00000077380|Q13409-2|DYNC1I2;nc|ENSG00000077380|Q13409-3|DYNC1I2;nc|ENSG00000077380|Q13409-5|DYNC1I2;nc|ENSG00000077380|Q13409-6|DYNC1I2;nc|ENSG00000077380|Q13409-7|DYNC1I2	158.07458414430337	0.004987072822166904	6				NaN	NaN	0	NaN	11927	3935	15862
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15865	40.033	NaN	9385.3	30	0	673.46	0.106	+			28854	NPVELKALY	9	72	523.7974064438876	1045.580259954575	2	523.798095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NPVELKALY_	DST|p.K5076Nfs*24|1|0.31|ENSG00000151914|chr6:56472218-56472218|T/-|frameshift_variant;DST|p.L1539Ffs*11|1|0.39|ENSG00000151914|chr6:56611525-56611526|-/A|frameshift_variant;DST|p.N1220Tfs*9|1|0.23|ENSG00000151914|chr6:56630354-56630354|T/-|frameshift_variant;DST|p.T4428Nfs*23|1|0.12|ENSG00000151914|chr6:56497896-56497897|-/T|frameshift_variant;ENSG00000127603|ENST00000564288|MACF1;ENSG00000151914|ENST00000680361|DST;ENST00000521104.1_1_6:56504020-56557947:-|nuORF;ENST00000523967.5_1_6:56504020-56716372:-|nuORF;MACF1|p.A5223Lfs*8|1|0.21|ENSG00000127603|chr1:39388486-39388486|G/-|frameshift_variant;MACF1|p.N4824Kfs*19|1|0.33|ENSG00000127603|chr1:39387292-39387293|-/A|frameshift_variant;MACF1|p.P924Hfs*52|1|0.23|ENSG00000127603|chr1:39303040-39303040|C/-|frameshift_variant;MACF1|p.S2157Ffs*3|1|0.37|ENSG00000127603|chr1:39333036-39333037|-/T|frameshift_variant;MACF1|p.T4896Lfs*29|1|0.27|ENSG00000127603|chr1:39387507-39387507|A/-|frameshift_variant;nc|ENSG00000127603|Q9UPN3-2|MACF1;nc|ENSG00000127603|Q9UPN3-3|MACF1;nc|ENSG00000127603|Q9UPN3-4|MACF1;nc|ENSG00000127603|Q9UPN3|MACF1;nc|ENSG00000151914|Q03001-13|DST;nc|ENSG00000151914|Q03001-14|DST;nc|ENSG00000151914|Q03001|DST	132.757866228626	0.013877640931359021	6				NaN	NaN	0	NaN	11928	3935	15862
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15866	40.035	NaN	4451.7	30	0	773.69	0.106	+			35246	SALGYLHSL	9	66	480.7604904214367	959.5064279096734	2	480.7610168457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SALGYLHSL_	ENSG00000118515|ENST00000367858|SGK1;ENST00000367855.7_1_6:134492115-134495951:-|nuORF;ENST00000474427.6_1_6:134493798-134493948:-|nuORF;ENST00000477460.6_1_6:134491408-134493948:-|nuORF;ENST00000524764.1_1_6:134493798-134494280:-|nuORF;nc|ENSG00000118515|O00141-3|SGK1;nc|ENSG00000118515|O00141-4|SGK1;nc|ENSG00000118515|O00141-5|SGK1;nc|ENSG00000118515|O00141|SGK1	93.19546047674547	0.05585629608842056	6				NaN	NaN	0	NaN	11929	3935	15862
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15867	40.036	NaN	5521.5	30	0	769.1	0.106	+			25810	LSCPLDLTL	9	63	516.2748781558114	1030.5352033784227	2	516.2759399414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_LSC(Carbamidomethyl (C))PLDLTL_	ENSG00000109738|ENST00000264428|GLRB;nc|ENSG00000109738|P48167-2|GLRB	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	11930	3935	15862
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15868	40.038	NaN	5938.3	30	0	812.09	0.106			+	3078	ASFTSAVIVGL	11	79	532.802682825584	1063.590812717968	2	532.8040161132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASFTSAVIVGL_	REV__ENST00000392250.6_1_19:32975010-32975169:+|nuORF	52.936696900407355	0.3865048210802777	6				NaN	NaN	0	NaN	11931	3935	15862
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15869	40.04	NaN	3145.2	30	0	465.89	0.035	+			18197	IMLFPQKL	8	68	495.29683370666936	988.5791144801387	2	495.2973327636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IMLFPQKL_	ENSG00000151835|ENST00000382292|SACS;nc|ENSG00000151835|Q9NZJ4-2|SACS;SACS|p.S4423Ffs*42|1|0.18|ENSG00000151835|chr13:23330610-23330611|-/G|frameshift_variant	52.29916861842294	0.578018602984656	6				NaN	NaN	0	NaN	11932	3935	15862
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15885	40.073	NaN	3969.2	30	0	434.51	0.214				-1	LAKEAMAMG	9	62	469.22715521947777	936.4397575057556	2	469.2273864746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LAKEAM(Oxidation (M))AMG_	ENSG00000119979|ENST00000361432|DENND10;ENST00000462327.1_1_10:120889049-120892241:+|nuORF;ENST00000498549.2_1_10:120879899-120896577:+|nuORF;ENST00000592932.1_1_X:129629132-129630203:+|nuORF;nc|ENSG00000119979|Q8TCE6-2|DENND10;nc|ENSG00000221930|Q6NSW5|DENND10P1	82.30502934623384	0.08758161712619916	6				NaN	NaN	0	NaN	11945	3938	15884
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15886	40.077	NaN	7475.5	30	0	1166.8	0.106	+			47263	VMSPLRTLL	9	75	515.3091750975096	1028.6037972618192	2	515.3103637695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VMSPLRTLL_	nc|ENSG00000205853|P0C7P2|RFPL3S	65.46538089061403	0.16805504838372562	6				NaN	NaN	0	NaN	11946	3938	15884
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15887	40.079	NaN	3639.4	30	0	804.17	0.106				-1	 	0	48	433.7521843703366	865.4898158074732	2	433.7525329589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11947	3938	15884
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15888	40.081	NaN	4596.1	30	0	734.9	0.106	+			6539	AYGFVARI	8	59	448.7526797668213	895.4908066004426	2	448.7528076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AYGFVARI_	ENSG00000110799|ENST00000261405|VWF;ENST00000321023.5_1_12:6204574-6232125:-|nuORF;nc|ENSG00000110799|P04275-2|VWF;VWF|p.D1472Tfs*53|1|0.21|ENSG00000110799|chr12:6019004-6019004|C/-|frameshift_variant	83.28718786952967	0.2977916691876266	6				NaN	NaN	0	NaN	11948	3938	15884
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15889	40.083	NaN	5732.5	30	0	647.31	0.106	+			47138	VLPYSKPLPS	10	67	550.8205484445363	1099.6265439558724	2	550.8216552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VLPYSKPLPS_	ENST00000572173.1_1_16:11389121-11410442:+|nuORF	44.377184641726394	0.5088115166961078	6				NaN	NaN	0	NaN	11949	3938	15884
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15890	40.084	NaN	4992.6	30	0	581.28	0.037	+			7786	DPFRDLHSL	9	58	367.18888739021804	1098.544832770854	3	367.1892395019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DPFRDLHSL_	ENSG00000136861|ENST00000349780|CDK5RAP2;ENST00000483412.5_1_9:123169248-123169542:-|nuORF;nc|ENSG00000136861|Q96SN8-2|CDK5RAP2;nc|ENSG00000136861|Q96SN8-3|CDK5RAP2	37.15910966729921	0.4535818937225704	6				NaN	NaN	0	NaN	11950	3938	15884
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15891	40.085	NaN	2747.1	30	0	246.87	0.142			+	43748	TLEEDAEVAR	10	75	566.7773425818474	1131.5401322304947	2	566.7783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TLEEDAEVAR_	REV__ENSG00000145391|ENST00000274031|SETD7	45.97224482568171	0.49411383603842696	6				NaN	NaN	0	NaN	11951	3938	15884
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15904	40.114	NaN	5085.9	30	0	858.08	0.214				-1	IYDLGMKMI	9	71	550.2804112844927	1098.5462696357854	2	550.2824096679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_IYDLGM(Oxidation (M))KMI_	ENST00000429864.1_1_X:127575186-127575687:+|nuORF	44.116797842482775	0.37197099687881774	6				NaN	NaN	0	NaN	11961	3941	15903
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15905	40.118	NaN	1653.1	30	0	125.97	0.106				-1	 	0	64	471.23937498427694	940.4641970353539	2	471.23974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11962	3941	15903
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15906	40.12	NaN	1619.4	30	0	142.85	0.106				-1	 	0	57	485.7994834592001	969.5844139852002	2	485.8001403808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11963	3941	15903
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15907	40.122	NaN	1896.7	30	0	239.81	0.106	+			2059	ALAKPLTQL	9	58	477.80271591905165	NaN	0	477.8026123046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ALAKPLTQL_	ENSG00000215045|ENST00000457091|GRID2IP;GRID2IP|p.L1003Cfs*46|1|0.47|ENSG00000215045|chr7:6503063-6503063|A/-|frameshift_variant;GRID2IP|p.S1123Lfs*62|1|0.41|ENSG00000215045|chr7:6501814-6501814|G/-|frameshift_variant	34.172542307311794	0.30503706118289736	6				NaN	NaN	0	NaN	11964	3941	15903
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15908	40.123	NaN	3550.4	30	0	591.98	0.106				-1	QDPKMQVY	8	66	533.7467280491383	1065.4789031650764	2	533.7478637695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))QDPKM(Oxidation (M))QVY_	APTX|p.H292Tfs*25|1|0.18|ENSG00000137074|chr9:32974500-32974501|-/T|frameshift_variant;ENSG00000137074|ENST00000379817|APTX;nc|ENSG00000137074|Q7Z2E3-10|APTX;nc|ENSG00000137074|Q7Z2E3-11|APTX;nc|ENSG00000137074|Q7Z2E3-2|APTX;nc|ENSG00000137074|Q7Z2E3-3|APTX;nc|ENSG00000137074|Q7Z2E3-4|APTX;nc|ENSG00000137074|Q7Z2E3-5|APTX;nc|ENSG00000137074|Q7Z2E3-9|APTX;nc|ENSG00000137074|Q7Z2E3|APTX	47.91560031466742	0.6071945918984287	6				NaN	NaN	0	NaN	11965	3941	15903
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15909	40.125	NaN	3280	30	0	304.45	0.036	+			29181	NVIRDAVTY	9	71	525.7837267623173	NaN	0	525.7835083007812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NVIRDAVTY_	ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2	51.19269402634007	0.19847346126499396	6				NaN	NaN	0	NaN	11966	3941	15903
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15910	40.126	NaN	2505.6	30	0	163.37	0.142	+			43949	TPDPTRPLTF	10	72	572.8029582790101	1143.5913636248201	2	572.8042602539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TPDPTRPLTF_	ENSG00000186377|ENST00000371901|CYP4X1;nc|ENSG00000186377|Q8N118-2|CYP4X1;nc|ENSG00000186377|Q8N118-3|CYP4X1	36.31764250033197	0.5830761606467809	6				NaN	NaN	0	NaN	11967	3941	15903
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15924	40.157	NaN	21713	30	0	5049.6	0.214	+			26942	LYGKIAEAF	9	76	506.2784515353052	1010.5423501374104	2	506.27880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LYGKIAEAF_	ENSG00000123159|ENST00000393033|GIPC1;ENST00000587811.1_1_19:14593203-14593794:-|nuORF;GIPC1|p.G115Afs*13|1|0.3|ENSG00000123159|chr19:14480723-14480723|C/-|frameshift_variant;GIPC1|p.R91H|1|0.19|ENSG00000123159|chr19:14482705-14482705|C/T|missense_variant	139.97047562133406	0.010493916756945389	6				NaN	NaN	0	NaN	11978	3944	15923
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15925	40.161	NaN	8011	30	0	1844.2	0.106	+			8099	DYDSVFHHL	9	55	378.1731738951915	1131.4976922857745	3	378.1733093261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DYDSVFHHL_	ENSG00000120616|ENST00000319778|EPC1;ENST00000495790.1_1_10:32573515-32573971:-|nuORF;EPC1|p.V808Rfs*9|1|0.18|ENSG00000120616|chr10:32271569-32271570|AC/-|frameshift_variant;nc|ENSG00000120616|Q9H2F5-3|EPC1;nc|ENSG00000120616|Q9H2F5|EPC1	49.44154591367651	0.3095138337212152	6				NaN	NaN	0	NaN	11979	3944	15923
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15926	40.163	NaN	2254.1	30	0	244.45	0.106	+			42770	TEAAIRLGL	9	61	472.28172598759335	942.5488990419867	2	472.2815856933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TEAAIRLGL_	ENSG00000117155|ENST00000342203|SSX2IP;ENST00000459708.1_1_1:85121010-85121631:-|nuORF;nc|ENSG00000117155|Q9Y2D8-2|SSX2IP;nc|ENSG00000117155|Q9Y2D8-3|SSX2IP;SSX2IP|p.Q516Gfs*48|1|0.16|ENSG00000117155|chr1:84650487-84650488|-/CA|frameshift_variant	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	11980	3944	15923
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15927	40.165	NaN	4389.1	30	0	732.28	0.106	+			30022	PPPAAAMDFS	10	74	502.2304488639244	1002.4463447946488	2	502.2308349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PPPAAAMDFS_	ENSG00000119698|ENST00000304338|PPP4R4;ENST00000555690.5_1_14:94640802-94696957:+|nuORF;nc|ENSG00000119698|Q6NUP7-2|PPP4R4;PPP4R4|p.S250Vfs*7|1|0.39|ENSG00000119698|chr14:94237577-94237577|A/-|frameshift_variant;PPP4R4|p.T186Nfs*8|1|0.1|ENSG00000119698|chr14:94233689-94233690|-/A|frameshift_variant	38.80614096846853	0.5601458937078225	6				NaN	NaN	0	NaN	11981	3944	15923
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15928	40.166	NaN	2006.7	30	0	506.13	0.106			+	6947	CPIDFVFLE	9	65	541.7640028482117	NaN	0	541.7644653320312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_CPIDFVFLE_	REV__ENSG00000132872|ENST00000255224|SYT4;REV__nc|ENSG00000132872|Q9H2B2-2|SYT4;REV__SYT4|p.I370Mfs*3|1|0.37|ENSG00000132872|chr18:43270508-43270509|TT/-|frameshift_variant	40.5726180659479	0.27166212580479165	6				NaN	NaN	0	NaN	11982	3944	15923
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15929	40.168	NaN	1737	30	0	173.19	0.033	+			11760	FSKAVLGL	8	54	417.7572558131576	833.4999586931152	2	417.75799560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FSKAVLGL_	tr|U7SSG6|U7SSG6_FUSNUNH(3)-dependentNAD(+)synthetaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=nadEPE=3SV=1	55.50420428727701	0.5462892107279674	6				NaN	NaN	0	NaN	11983	3944	15923
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15930	40.169	NaN	2242.6	30	0	220.54	0.139			+	7945	DSLLQIII	8	51	457.78098292132245	913.5474129094449	2	457.781494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DSLLQIII_	REV__ENSG00000140279|ENST00000389039|DUOX2;REV__ENST00000558383.1_1_15:45393877-45400429:-|nuORF;REV__nc|ENSG00000140279|Q9NRD8|DUOX2	45.9519527083369	0.6193794311207887	6				NaN	NaN	0	NaN	11984	3944	15923
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15943	40.198	NaN	14235	30	0	3494.6	0.214				-1	MLVSDGVHSV	10	75	530.2606425653574	1058.5067321975148	2	530.2614135742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))LVSDGVHSV_	CELSR2|p.V1100M|1|0.62|ENSG00000143126|chr1:109253377-109253377|G/A|missense_variant	37.15910966729921	0.575322462179216	6				NaN	NaN	0	NaN	11994	3947	15942
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15944	40.202	NaN	7255.6	30	0	714.9	0.106				-1	 	0	76	600.2889250623906	1198.5632971915811	2	600.2909545898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11995	3947	15942
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15945	40.204	NaN	7304.1	30	0	1027.4	0.106	+			43792	TLLDTSKAVAI	11	80	566.3341915416603	1130.6538301501205	2	566.33544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TLLDTSKAVAI_	ENSG00000239642|ENST00000442687|MEIKIN	73.90049950687481	0.20322248490973555	6				NaN	NaN	0	NaN	11996	3947	15942
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15946	40.205	NaN	4943.7	30	0	494.3	0.106	+			38559	SSFGEFLSK	9	66	501.25031364649425	1000.4860743597885	2	501.2511291503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSFGEFLSK_	nc|ENSG00000075790|Q9UHQ4-2|BCAP29	77.31757898189308	0.1091473830098891	6				NaN	NaN	0	NaN	11997	3947	15942
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15947	40.207	NaN	3886.6	30	0	453.06	0.106	+			13737	GQAVTLIFK	9	69	488.79477655161287	NaN	0	488.794921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GQAVTLIFK_	ENSG00000144659|ENST00000650617|SLC25A38	51.19269402634007	0.19847346126499396	6				NaN	NaN	0	NaN	11998	3947	15942
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15948	40.209	NaN	6082.6	30	0	834.18	0.035	+			4087	ATDLTFLEK	9	73	519.278726900254	1036.542900867308	2	519.2803955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATDLTFLEK_	ENSG00000197879|ENST00000648651|MYO1C;ENST00000573961.1_1_17:1380797-1381223:-|nuORF;nc|ENSG00000197879|O00159-2|MYO1C;nc|ENSG00000197879|O00159-3|MYO1C	72.87924865735499	0.12833875048249987	6				NaN	NaN	0	NaN	11999	3947	15942
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15949	40.21	NaN	1172.5	30	0	65.636	0.139	+			37599	SLPPNQAF	8	48	437.22680923196015	NaN	0	437.22705078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SLPPNQAF_	nc|ENSG00000104885|Q8TEK3-1|DOT1L	28.2542754592877	1.7418937515398478	6				NaN	NaN	0	NaN	12000	3947	15942
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15962	40.239	NaN	3774.1	30	0	584.53	0.214	+			5928	AVLFTYVGK	9	66	499.2887421094392	996.5629312856785	2	499.28912353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVLFTYVGK_	ENSG00000117480|ENST00000243167|FAAH;ENST00000468718.5_1_1:46860020-46871294:+|nuORF;ENST00000493735.5_1_1:46860047-46871467:+|nuORF	77.31757898189308	0.1091473830098891	6				NaN	NaN	0	NaN	12010	3950	15961
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15963	40.242	NaN	3287.8	30	0	534.95	0.106			+	7745	DMTIALHM	8	62	466.2222809976879	930.4300090621758	2	466.222412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DMTIALHM_	REV__ENSG00000164049|ENST00000296438|FBXW12;REV__ENST00000477542.5_1_3:48415047-48423401:+|nuORF;REV__nc|ENSG00000164049|Q6X9E4-3|FBXW12	52.29916861842294	0.578018602984656	6				NaN	NaN	0	NaN	12011	3950	15961
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15964	40.244	NaN	2168.9	30	0	182.44	0.106	+			10822	FAPAAEKKV	9	59	480.778290261855	959.54202759051	2	480.7785949707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FAPAAEKKV_	GATAD1|p.S102F|1|0.2|ENSG00000157259|chr7:92448807-92448807|C/T|missense_variant	25.450171626174864	0.5654022654467333	6				NaN	NaN	0	NaN	12012	3950	15961
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15965	40.246	NaN	1655.9	30	0	185.19	0.106	+			28683	NLYIISVK	8	60	475.2889533100865	948.5633536869731	2	475.2892761230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NLYIISVK_	ENSG00000125691|ENST00000479035|RPL23;ENST00000577760.1_1_17:37008851-37009031:-|nuORF;ENST00000584912.5_1_17:37008851-37009963:-|nuORF	29.14955571784316	0.7342621283720113	6				NaN	NaN	0	NaN	12013	3950	15961
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15966	40.248	NaN	1742.8	30	0	329.89	0.106	+			19061	IYGSSHSW	8	59	468.713763302994	935.412973672788	2	468.7140197753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IYGSSHSW_	DUOX1|p.S186N|1|0.29|ENSG00000137857|chr15:45135535-45135535|G/A|missense_variant;ENSG00000137857|ENST00000389037|DUOX1;ENSG00000140279|ENST00000389039|DUOX2;nc|ENSG00000140279|Q9NRD8|DUOX2	26.79610172149135	0.7524337208463756	6				NaN	NaN	0	NaN	12014	3950	15961
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15967	40.25	NaN	3288.7	30	0	408.35	0.035	+			18205	IMTGSYNNF	9	72	523.7336872324454	1045.4528215316907	2	523.7340087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IMTGSYNNF_	ENSG00000156475|ENST00000394411|PPP2R2B;ENSG00000175470|ENST00000455566|PPP2R2D;ENST00000490777.2_10:133754324-133769464:+|nuORF;nc|ENSG00000156475|Q00005-2|PPP2R2B;nc|ENSG00000156475|Q00005-3|PPP2R2B;nc|ENSG00000156475|Q00005-4|PPP2R2B;nc|ENSG00000156475|Q00005-5|PPP2R2B;nc|ENSG00000156475|Q00005-6|PPP2R2B;nc|ENSG00000156475|Q00005-7|PPP2R2B;PPP2R2B|p.G397Afs*31|1|0.1|ENSG00000156475|chr5:146590089-146590089|C/-|frameshift_variant	87.69643885390035	0.07135982304947239	6				NaN	NaN	0	NaN	12015	3950	15961
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15968	40.25	NaN	1081.5	30	0	159.06	0.144			+	-1	KGCITCEYPKV	11	50	649.3167538812561	1296.618954829312	2	649.81640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_KGC(Carbamidomethyl (C))ITCEYPKV_	REV__ENSG00000173875|ENST00000343325|ZNF791;REV__nc|ENSG00000173875|Q3KP31-2|ZNF791;REV__ZNF791|p.K388Nfs*10|3|0.35|ENSG00000173875|chr19:12628688-12628688|A/-|frameshift_variant;REV__ZNF791|p.K569Nfs*3|1|0.5|ENSG00000173875|chr19:12629230-12629230|A/-|frameshift_variant	20.83715455343099	0.7712264395190968	6				NaN	NaN	0	NaN	12016	3950	15961
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15980	40.278	NaN	12248	30	0	2015.3	0.214	+			47211	VMAPRTVLL	9	79	500.30392801959505	998.5933031059901	2	500.3043212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VMAPRTVLL_	ENSG00000234745|ENST00000412585|HLA-B;ENST00000434333.1_1_6:31324722-31324935:-|nuORF;ENST00000498007.1_1_6:31324459-31324935:-|nuORF;HLA-B|p.G124Wfs*15|1|0.18|ENSG00000234745|chr6:31356416-31356417|-/A|frameshift_variant;HLA-B|p.H215Tfs*11|1|0.35|ENSG00000234745|chr6:31355569-31355569|G/-|frameshift_variant;HLA-B|p.P209Qfs*5|6|0.16|ENSG00000234745|chr6:31355586-31355586|G/-|frameshift_variant;HLA-B|p.P81Rfs*70|1|0.56|ENSG00000234745|chr6:31356791-31356791|C/-|frameshift_variant;HLA-B|p.R72Gfs*5|1|0.25|ENSG00000234745|chr6:31356818-31356818|C/-|frameshift_variant;HLA-B|p.V306Afs*13|1|0.49|ENSG00000234745|chr6:31355202-31355202|A/-|frameshift_variant;HLA-B|p.V312Cfs*22|1|0.28|ENSG00000234745|chr6:31355185-31355186|-/A|frameshift_variant	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	12025	3953	15979
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15981	40.281	NaN	3816.1	30	0	433.26	0.106				-1	 	0	61	483.27286701810635	964.5311811030127	2	483.2733154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12026	3953	15979
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15982	40.283	NaN	2112.4	30	0	216.9	0.106	+			28708	NNIKKKDN	8	62	487.27499887860176	972.5354448240035	2	487.2765808105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NNIKKKDN_	ENSG00000095777|ENST00000642920|MYO3A	60.97194046774394	0.49215940876911696	6				NaN	NaN	0	NaN	12027	3953	15979
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15983	40.285	NaN	2308.4	30	0	332.23	0.106			+	26651	LVEKILLK	8	60	478.33023766240734	954.6459223916147	2	478.3305969238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LVEKILLK_	REV__ATP13A3|p.F1107Lfs*5|1|0.42|ENSG00000133657|chr3:194419960-194419960|A/-|frameshift_variant;REV__ATP13A3|p.I476Sfs*11|1|0.19|ENSG00000133657|chr3:194446998-194446998|T/-|frameshift_variant;REV__ATP13A3|p.L1114Ffs*17|1|0.25|ENSG00000133657|chr3:194419939-194419940|-/A|frameshift_variant;REV__ATP13A3|p.L1114Yfs*22|1|0.23|ENSG00000133657|chr3:194419940-194419940|A/-|frameshift_variant;REV__ATP13A3|p.P1198Lfs*19|1|0.04|ENSG00000133657|chr3:194406007-194406008|-/ATATAGTA|frameshift_variant;REV__ATP13A3|p.S1110Ffs*21|2|0.22|ENSG00000133657|chr3:194419952-194419953|-/A|frameshift_variant;REV__ATP13A3|p.V1108Cfs*23|1|0.26|ENSG00000133657|chr3:194419959-194419960|-/A|frameshift_variant;REV__ENSG00000127249|ENST00000342695|ATP13A4;REV__ENSG00000133657|ENST00000645319|ATP13A3;REV__nc|ENSG00000127249|Q4VNC1-2|ATP13A4;REV__nc|ENSG00000127249|Q4VNC1-3|ATP13A4;REV__nc|ENSG00000133657|Q9H7F0|ATP13A3	51.33545320467046	0.5859736979383976	6				NaN	NaN	0	NaN	12028	3953	15979
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15984	40.287	NaN	2498.1	30	0	394.49	0.106	+			10178	ETAFLIQAL	9	60	503.28355481032844	1004.5525566874569	2	503.28460693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ETAFLIQAL_	nc|ENSG00000266200|P54317|PNLIPRP2	56.72105179125745	0.24094814563026265	6				NaN	NaN	0	NaN	12029	3953	15979
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15985	40.288	NaN	2466.7	30	0	479.04	0.044	+			2811	ARWRYRCWERR	11	64	546.614949794451	NaN	0	546.6148681640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ARWRYRCWERR_	ENST00000328599.4_1_8:125463328-125463391:+|nuORF	5.698786898958082	0.456735970842152	6				NaN	NaN	0	NaN	12030	3953	15979
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15999	40.318	NaN	18407	30	0	1781.2	0.214	+			28046	NAAKVFNLY	9	83	520.2817461838972	1038.5489394345943	2	520.2823486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAAKVFNLY_	ENSG00000092964|ENST00000521913|DPYSL2;nc|ENSG00000092964|Q16555-2|DPYSL2;nc|ENSG00000092964|Q16555|DPYSL2	120.8684288430529	0.02067403653475984	6				NaN	NaN	0	NaN	12041	3956	15998
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16000	40.322	NaN	4026.7	30	0	502.87	0.106	+			45389	TVTLTVAV	8	56	402.24740205467367	NaN	0	402.2474365234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVTLTVAV_	ENSG00000081853|ENST00000394576|PCDHGA2;ENSG00000204956|ENST00000517417|PCDHGA1;ENSG00000253159|ENST00000252085|PCDHGA12;ENSG00000253537|ENST00000518325|PCDHGA7;ENSG00000253731|ENST00000517434|PCDHGA6;ENSG00000253767|ENST00000398604|PCDHGA8;ENSG00000253846|ENST00000398610|PCDHGA10;ENSG00000253873|ENST00000398587|PCDHGA11;ENSG00000254245|ENST00000253812|PCDHGA3;ENSG00000262576|ENST00000571252|PCDHGA4;nc|ENSG00000081853|Q9Y5H1-2|PCDHGA2;nc|ENSG00000204956|Q9Y5H4-2|PCDHGA1;nc|ENSG00000253159|O60330-2|PCDHGA12;nc|ENSG00000253537|Q9Y5G6-2|PCDHGA7;nc|ENSG00000253731|Q9Y5G7-2|PCDHGA6;nc|ENSG00000253767|Q9Y5G5-2|PCDHGA8;nc|ENSG00000253846|Q9Y5H3-2|PCDHGA10;nc|ENSG00000253873|Q9Y5H2-2|PCDHGA11;nc|ENSG00000254245|Q9Y5H0-2|PCDHGA3;nc|ENSG00000262576|Q9Y5G9-2|PCDHGA4;PCDHGA1|p.Q772Sfs*79|1|0.05|ENSG00000204956|chr5:141332994-141332994|C/-|frameshift_variant;PCDHGA10|p.S671I|1|0.3|ENSG00000253846|chr5:141415187-141415187|G/T|missense_variant;PCDHGA11|p.R724Afs*19|1|0.34|ENSG00000253873|chr5:141423397-141423397|C/-|frameshift_variant;PCDHGA2|p.A656T|1|0.24|ENSG00000081853|chr5:141340937-141340937|G/A|missense_variant;PCDHGA2|p.K788Rfs*64|1|0.06|ENSG00000081853|chr5:141341330-141341330|A/-|frameshift_variant;PCDHGA6|p.F770Sfs*23|1|0.29|ENSG00000253731|chr5:141376389-141376389|T/-|frameshift_variant;PCDHGA7|p.V757Sfs*12|1|0.31|ENSG00000253537|chr5:141385167-141385167|G/-|frameshift_variant;PCDHGA8|p.L712Sfs*33|1|0.15|ENSG00000253767|chr5:141394944-141394945|-/T|frameshift_variant;PCDHGA8|p.N788Kfs*2|1|0.27|ENSG00000253767|chr5:141395171-141395172|-/A|frameshift_variant	79.9392285194092	1.7418937515398478	6				NaN	NaN	0	NaN	12042	3956	15998
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16001	40.324	NaN	3180	30	0	476.98	0.106	+			38750	SSLPTVGVFAK	11	67	553.3166484175127	NaN	0	553.316650390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSLPTVGVFAK_	ENSG00000156709|ENST00000287295|AIFM1;nc|ENSG00000156709|O95831-2|AIFM1;nc|ENSG00000156709|O95831-3|AIFM1;nc|ENSG00000156709|O95831-5|AIFM1	80.91624569148213	0.07773164481057145	6				NaN	NaN	0	NaN	12043	3956	15998
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16002	40.326	NaN	3800.8	30	0	630.51	0.106	+			6882	CLLPSQDLAN	10	77	537.2681754773869	1072.5217980215737	2	537.2695922851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_CLLPSQDLAN_	ENST00000488069.5_1_3:46964817-47018222:-|nuORF;ENST00000604367.1_1_3:46964817-46965171:-|nuORF	25.57405402267927	0.6709832231498071	6				NaN	NaN	0	NaN	12044	3956	15998
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16003	40.328	NaN	8082.1	30	0	1244	0.106				-1	 	0	76	496.7917277531134	991.5689025730268	2	496.7928466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12045	3956	15998
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16004	40.329	NaN	2254.9	30	0	228.33	0.041			+	11333	FLDEVWKVNKM	11	61	470.2462463378906	NaN	0	470.2462463378906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FLDEVWKVNKM_	REV__ENSG00000060749|ENST00000650167|QSER1;REV__nc|ENSG00000060749|Q2KHR3-2|QSER1;REV__nc|ENSG00000060749|Q2KHR3|QSER1	42.33807565288922	0.3703495330385095	6				NaN	NaN	0	NaN	12046	3956	15998
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16005	40.33	NaN	3785.7	30	0	248.67	0.141	+			50746	YEKILFTEA	9	76	557.2957513083578	NaN	0	557.29541015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YEKILFTEA_	ENSG00000099341|ENST00000215071|PSMD8	90.60085204095205	0.040385177724871185	6				NaN	NaN	0	NaN	12047	3956	15998
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16023	40.369	NaN	55479	30	0	10438	0.214				-1	 	0	69	446.2315982228028	890.4486435124056	2	446.23193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12062	3959	16022
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16024	40.373	NaN	15274	30	0	2677.5	0.106	+			35919	SEFPIRTL	8	78	481.7687497922434	961.5229466512868	2	481.7686767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEFPIRTL_	CKAP5|p.V1971Lfs*42|1|0.03|ENSG00000175216|chr11:46744211-46744212|-/TTGAAAAAAAG|frameshift_variant;ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5	71.87747018426188	0.391254423828572	6				NaN	NaN	0	NaN	12063	3959	16022
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16025	40.375	NaN	11926	30	0	2692.3	0.106	+			45022	TVFLSTWNK	9	79	548.2945821723081	1094.574611411416	2	548.295654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVFLSTWNK_	ENSG00000173821|ENST00000582970|RNF213;ENST00000411702.7_1_17:78356744-78367295:+|nuORF;ENST00000427003.7_1_17:78356226-78367295:+|nuORF;nc|ENSG00000173821|Q63HN8-4|RNF213;nc|ENSG00000173821|Q63HN8-6|RNF213;nc|ENSG00000173821|Q63HN8|RNF213;RNF213|p.C5022Lfs*7|1|0.3|ENSG00000173821|chr17:80389237-80389237|G/-|frameshift_variant	110.11987700582712	0.028875675806141952	6				NaN	NaN	0	NaN	12064	3959	16022
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16026	40.377	NaN	6301.7	30	0	1301.8	0.106			+	25631	LQQLSPLAI	9	63	491.7996354684092	981.5847180036184	2	491.8000183105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LQQLSPLAI_	REV__TET3|p.Q379Rfs*162|2|0.23|ENSG00000187605|chr2:74047047-74047047|C/-|frameshift_variant	74.25504064058377	0.12238981753128622	6				NaN	NaN	0	NaN	12065	3959	16022
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16027	40.378	NaN	3149.3	30	0	449.75	0.106	+			36412	SETPGLGAKI	10	68	486.77127673573585	NaN	0	486.77154541015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SETPGLGAKI_	tr|U7T6G4|U7T6G4_FUSNUIon-translocatingoxidoreductasecomplexsubunitGOS=FusobacteriumnucleatumCTI-5OX=1316586GN=rnfGPE=3SV=1	74.25504064058377	0.12773286341944762	6				NaN	NaN	0	NaN	12066	3959	16022
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16028	40.38	NaN	8034.1	30	0	714.2	0.035	+			41219	SVLENFVGR	9	75	510.77602308411946	1019.5374932350389	2	511.27825927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVLENFVGR_	DNM2|p.L793*|2|0.27|ENSG00000079805|chr19:10830206-10830206|C/-|frameshift_variant;DNM2|p.L793Pfs*31|1|0.35|ENSG00000079805|chr19:10830205-10830206|-/C|frameshift_variant;ENSG00000079805|ENST00000389253|DNM2;ENSG00000106976|ENST00000372923|DNM1;ENSG00000197959|ENST00000627582|DNM3;nc|ENSG00000079805|P50570-2|DNM2;nc|ENSG00000079805|P50570-3|DNM2;nc|ENSG00000079805|P50570-5|DNM2;nc|ENSG00000079805|P50570|DNM2;nc|ENSG00000106976|Q05193-2|DNM1;nc|ENSG00000106976|Q05193-3|DNM1;nc|ENSG00000106976|Q05193-5|DNM1;nc|ENSG00000197959|Q9UQ16-2|DNM3;nc|ENSG00000197959|Q9UQ16-4|DNM3;nc|ENSG00000197959|Q9UQ16-5|DNM3;nc|ENSG00000197959|Q9UQ16|DNM3	96.0336014099291	0.047854655524928534	6				NaN	NaN	0	NaN	12067	3959	16022
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16029	40.381	NaN	3935.8	30	0	747.88	0.14			+	50288	WSDQPGISY	9	60	526.7374888396558	1051.4604247461116	2	526.73876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_WSDQPGISY_	REV__ENST00000492667.5_1_10:102249405-102250104:-|nuORF	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	12068	3959	16022
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16046	40.418	NaN	3885.9	30	0	1157.4	0.214				-1	LGGNCRTVMI	10	46	374.191518593623	1119.552726381069	3	374.19183349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_LGGNC(Carbamidomethyl (C))RTVMI_	ENSG00000186185|ENST00000593135|KIF18B;KIF18B|p.C684Afs*66|1|0.21|ENSG00000186185|chr17:44928253-44928253|G/-|frameshift_variant;KIF18B|p.G393Efs*91|1|0.13|ENSG00000186185|chr17:44932733-44932733|C/-|frameshift_variant;nc|ENSG00000186185|Q86Y91-6|KIF18B	37.81151784470057	0.569310847604193	6				NaN	NaN	0	NaN	12082	3962	16045
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16047	40.421	NaN	2283.2	30	0	481.51	0.106			+	51483	YVHQVERDD	9	42	387.5170631666942	NaN	0	387.5169982910156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YVHQVERDD_	REV__ENST00000544151.1_1_12:21807353-21810687:-|nuORF	27.882242232435846	0.3367954786602879	6				NaN	NaN	0	NaN	12083	3962	16045
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16048	40.423	NaN	1536.5	30	0	107.71	0.106				-1	LMLLAMGLSSA	11	68	569.7992192783207	NaN	0	569.79931640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Oxidation (M)	_LM(Oxidation (M))LLAM(Oxidation (M))GLSSA_	ENSG00000063127|ENST00000335875|SLC6A16;ENST00000598221.1_1_19:49796478-49828345:-|nuORF;nc|ENSG00000063127|Q9GZN6-2|SLC6A16	31.954861631926434	0.423006731851301	6				NaN	NaN	0	NaN	12084	3962	16045
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16049	40.425	NaN	3385.7	30	0	665.13	0.106			+	48599	VTQSWPGSGIA	11	57	368.18773190841364	1101.541366325441	3	368.1883544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTQSWPGSGIA_	REV__ENSG00000069188|ENST00000392650|SDK2;REV__ENST00000479356.1_1_17:71354047-71433905:-|nuORF;REV__nc|ENSG00000069188|Q58EX2-2|SDK2;REV__nc|ENSG00000069188|Q58EX2-3|SDK2;REV__nc|ENSG00000069188|Q58EX2-4|SDK2;REV__SDK2|p.P1324Lfs*69|1|0.1|ENSG00000069188|chr17:73391466-73391466|G/-|frameshift_variant;REV__SDK2|p.R2017Gfs*28|1|0.29|ENSG00000069188|chr17:73348716-73348716|G/-|frameshift_variant;REV__SDK2|p.T1715Pfs*21|1|0.11|ENSG00000069188|chr17:73368432-73368432|G/-|frameshift_variant	34.08650109265054	0.6322515996262609	6				NaN	NaN	0	NaN	12085	3962	16045
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16050	40.427	NaN	2301.3	30	0	158.8	0.106	+			50879	YFLFFFFF	8	67	589.2916895511721	1176.5688261691441	2	589.2921752929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YFLFFFFF_	L1PB1_dup5905|chr7:93807211-93809400:+|2.023350116566841|0.2056128638309657|3.3|382.0|97|1|anti-sense	35.200714571348534	0.6875396545722289	6				NaN	NaN	0	NaN	12086	3962	16045
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16051	40.429	NaN	589.38	30	0	51.792	0.106				-1	 	0	33	347.1982823180995	692.382011702999	2	347.1985168457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12087	3962	16045
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16052	40.431	NaN	1835.1	30	0	180.61	0.037				-1	CGMAWCPCLL	10	58	577.2367553710938	NaN	0	577.2367553710938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_CGMAWCPC(Carbamidomethyl (C))LL_	ENST00000551692.5_1_14:105834472-105850026:+|nuORF	35.200714571348534	0.3845941098745963	6				NaN	NaN	0	NaN	12088	3962	16045
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16068	40.463	NaN	12517	30	0	3728.5	0.214	+			7736	DLVVLDTSNS	10	80	531.7700794098326	1061.5256058864652	2	531.771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DLVVLDTSNS_	DNAH14|p.I2559Nfs*2|1|0.39|ENSG00000185842|chr1:225337448-225337449|-/A|frameshift_variant;DNAH14|p.T2021Hfs*9|1|0.38|ENSG00000185842|chr1:225289906-225289906|A/-|frameshift_variant;ENSG00000185842|ENST00000682510|DNAH14;nc|ENSG00000185842|Q0VDD8-4|DNAH14;nc|ENSG00000185842|Q0VDD8|DNAH14	75.04331003522576	0.23611669241777622	6				NaN	NaN	0	NaN	12101	3965	16067
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16069	40.466	NaN	7352.3	30	0	1073.8	0.106	+			18005	IIEPSLRQL	9	68	534.8237543796366	1067.6329558260732	2	534.8247680664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IIEPSLRQL_	ENSG00000221983|ENST00000442744|UBA52	90.36981228632155	0.0638227155548745	6				NaN	NaN	0	NaN	12102	3965	16067
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16070	40.468	NaN	5736.7	30	0	834.97	0.106			+	37614	SLPTGVQVF	9	62	474.2629986705277	946.5114444078554	2	474.2631530761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLPTGVQVF_	REV__ENSG00000253309|ENST00000681248|SERPINE3;REV__nc|ENSG00000253309|A8MV23|SERPINE3;REV__SERPINE3|p.L270*|2|0.3|ENSG00000253309|chr13:51348315-51348315|C/-|frameshift_variant	56.72105179125745	0.24094814563026265	6				NaN	NaN	0	NaN	12103	3965	16067
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16071	40.47	NaN	13293	30	0	3300.3	0.106				-1	 	0	70	452.76139996623107	903.5082469992622	2	452.761962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12104	3965	16067
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16072	40.472	NaN	5638.8	30	0	772.84	0.106	+			9812	EPFTGSSKILY	11	78	621.3239969327838	1240.6334409323674	2	621.32470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EPFTGSSKILY_	CDH17|p.S645Lfs*3|1|0.55|ENSG00000079112|chr8:94146163-94146163|C/-|frameshift_variant;ENSG00000079112|ENST00000027335|CDH17	102.95473732560676	0.05457861179418332	6				NaN	NaN	0	NaN	12105	3965	16067
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16073	40.473	NaN	2436.5	30	0	298.14	0.035			+	27282	MGAPGHLLPS	10	57	490.2569799977447	978.4994070622894	2	490.2567443847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MGAPGHLLPS_	REV__ENSG00000139445|ENST00000299162|FOXN4;REV__FOXN4|p.P152Rfs*50|1|0.13|ENSG00000139445|chr12:109287857-109287857|G/-|frameshift_variant;REV__nc|ENSG00000139445|Q96NZ1-2|FOXN4	47.91560031466742	0.4762067885998563	6				NaN	NaN	0	NaN	12106	3965	16067
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16074	40.474	NaN	3257	30	0	229.32	0.142			+	-1	FIHSCDLQI	9	72	566.7773425818474	1131.5401322304947	2	566.7786254882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_FIHSC(Carbamidomethyl (C))DLQI_	REV__ENSG00000005810|ENST00000544440|MYCBP2;REV__nc|ENSG00000005810|O75592-2|MYCBP2	42.396135135203025	0.392153681582562	6				NaN	NaN	0	NaN	12107	3965	16067
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16092	40.513	NaN	10326	30	0	2490	0.214	+			45881	VANPNSAIF	9	62	466.74497877922767	931.4754046252554	2	466.7452087402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VANPNSAIF_	ENSG00000106682|ENST00000265753|EIF4H;nc|ENSG00000106682|Q15056-2|EIF4H	87.69643885390035	0.07135982304947239	6				NaN	NaN	0	NaN	12122	3968	16091
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16093	40.517	NaN	19679	30	0	2141.9	0.106	+			3585	ASVFGTMPLK	10	78	525.7854194514725	NaN	0	525.78662109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASVFGTMPLK_	ENSG00000151348|ENST00000533608|EXT2;nc|ENSG00000151348|Q93063-2|EXT2;nc|ENSG00000151348|Q93063-3|EXT2	155.5846463517096	2.832767384487603E-05	6				NaN	NaN	0	NaN	12123	3968	16091
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16094	40.519	NaN	4397	30	0	323.52	0.106	+			41223	SVLEQSFLR	9	78	539.7985082642542	1077.5824635953084	2	539.79833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVLEQSFLR_	ENSG00000085840|ENST00000371568|ORC1;ORC1|p.N769K|1|0.24|ENSG00000085840|chr1:52374894-52374894|A/C|missense_variant	68.84614121027924	0.14577793175421136	6				NaN	NaN	0	NaN	12124	3968	16091
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16095	40.521	NaN	4378.3	30	0	1029	0.106			+	7966	DSTALHKL	8	56	442.744782404028	883.475011874856	2	442.7449645996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DSTALHKL_	REV__ENSG00000099219|ENST00000339450|ERMP1;REV__ERMP1|p.L627Wfs*6|1|0.25|ENSG00000099219|chr9:5805061-5805061|A/-|frameshift_variant;REV__ERMP1|p.T651Pfs*3|1|0.36|ENSG00000099219|chr9:5801292-5801292|T/-|frameshift_variant;REV__nc|ENSG00000099219|Q7Z2K6-2|ERMP1	68.78682469695295	0.41700713582915416	6				NaN	NaN	0	NaN	12125	3968	16091
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16096	40.523	NaN	2539.5	30	0	354.29	0.106			+	49410	VVTVQSAP	8	50	400.7289704361008	799.4433879390016	2	400.72930908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVTVQSAP_	REV__ENST00000357700.10_1_10:5681946-5682531:-|nuORF	45.9519527083369	0.6193794311207887	6				NaN	NaN	0	NaN	12126	3968	16091
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16097	40.524	NaN	3157.7	30	0	197.56	0.036			+	6710	AYYSWGLLL	9	65	543.2850225478818	1084.5554921625635	2	543.2852783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AYYSWGLLL_	REV__ENSG00000104219|ENST00000262096|ZDHHC2;REV__ZDHHC2|p.S285Qfs*3|1|0.14|ENSG00000104219|chr8:17210049-17210049|T/-|frameshift_variant	56.72105179125745	0.24094814563026265	6				NaN	NaN	0	NaN	12127	3968	16091
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16098	40.525	NaN	2012.7	30	0	220.16	0.14	+			27175	MDIVVHTL	8	59	464.2515936117288	NaN	0	464.2516174316406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MDIVVHTL_	ENSG00000151502|ENST00000281187|VPS26B;ENST00000527586.1_1_11:134109936-134113358:+|nuORF;VPS26B|p.E144K|1|0.33|ENSG00000151502|chr11:134240040-134240040|G/A|missense_variant	51.33545320467046	1.7418937515398478	6				NaN	NaN	0	NaN	12128	3968	16091
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16114	40.56	NaN	91325	30	0	18710	0.147	+			7312	DASKVVTVF	9	67	483.2681920518007	964.5218311704015	2	483.2683410644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DASKVVTVF_	ENSG00000071127|ENST00000499869|WDR1;ENST00000502962.5_1_4:10077004-10094774:-|nuORF;ENST00000515743.5_1_4:10078742-10093271:-|nuORF;nc|ENSG00000071127|O75083-3|WDR1	112.2953585152457	0.026655838328212944	6				NaN	NaN	0	NaN	12141	3971	16113
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16115	40.563	NaN	6247.5	30	0	1056.4	0.106			+	-1	LHFCKCKTY	9	75	600.2889250623906	1198.5632971915811	2	600.2900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LHFCKC(Carbamidomethyl (C))KTY_	REV__nc|ENSG00000268758|Q86SQ3|ADGRE4P	50.0245360154114	0.3026755932229825	6				NaN	NaN	0	NaN	12142	3971	16113
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16116	40.565	NaN	5477.2	30	0	777.53	0.106			+	49949	VYVTYQTW	8	80	530.2606425653574	1058.5067321975148	2	530.2631225585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYVTYQTW_	REV__IGF1R|p.A578T|1|0.44|ENSG00000140443|chr15:98913186-98913186|G/A|missense_variant	38.80614096846853	0.6637206697844082	6				NaN	NaN	0	NaN	12143	3971	16113
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16117	40.567	NaN	5391.1	30	0	719.09	0.106			+	13080	GFNAFDYIL	9	65	530.2606425653574	1058.5067321975148	2	530.7645263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GFNAFDYIL_	REV__ENSG00000076242|ENST00000231790|MLH1;REV__nc|ENSG00000076242|P40692-2|MLH1;REV__nc|ENSG00000076242|P40692-3|MLH1	44.116797842482775	0.37197099687881774	6				NaN	NaN	0	NaN	12144	3971	16113
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16118	40.569	NaN	2319.6	30	0	231.66	0.106	+			27170	MDFTAARL	8	54	462.73338581000326	923.4522186868065	2	462.73370361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MDFTAARL_	ENSG00000102580|ENST00000602402|DNAJC3	79.71258880314673	0.32596852995588826	6				NaN	NaN	0	NaN	12145	3971	16113
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16119	40.571	NaN	4354.7	30	0	444.05	0.106	+			27343	MIIDTQLCR	9	71	546.7822542241621	1091.549955515124	2	546.7822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MIIDTQLCR_	ENSG00000104133|ENST00000261866|SPG11;nc|ENSG00000104133|Q96JI7-2|SPG11;nc|ENSG00000104133|Q96JI7-3|SPG11;SPG11|p.F771Cfs*4|1|0.18|ENSG00000104133|chr15:44622732-44622733|-/C|frameshift_variant;SPG11|p.K717Nfs*8|1|0.07|ENSG00000104133|chr15:44626424-44626424|T/-|frameshift_variant;SPG11|p.L950Wfs*13|2|0.21|ENSG00000104133|chr15:44615552-44615552|A/-|frameshift_variant	60.11826168202944	0.21262886028301267	6				NaN	NaN	0	NaN	12146	3971	16113
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16120	40.572	NaN	4408.6	30	0	572.45	0.035	+			8727	EEENLSKY	8	67	506.2347320077399	1010.4549110822799	2	506.2353820800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EEENLSKY_	ENSG00000163703|ENST00000452070|CRELD1;ENST00000465716.1_1_3:9976275-9979984:+|nuORF;ENST00000491527.1_1_3:9976275-9976602:+|nuORF;nc|ENSG00000163703|Q96HD1-2|CRELD1	38.80614096846853	0.6637206697844082	6				NaN	NaN	0	NaN	12147	3971	16113
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16133	40.6	NaN	7416.9	30	0	2545.4	0.214	+			49977	WAGKKTGISP	10	62	522.7948102682337	1043.5750676032674	2	522.7958374023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WAGKKTGISP_	ENST00000406606.7_3_9:136628319-136628436:-|nuORF	45.97224482568171	0.49411383603842696	6				NaN	NaN	0	NaN	12157	3974	16132
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16134	40.603	NaN	3923.1	30	0	733.83	0.106	+			26344	LSYQSVFL	8	67	478.75758261055296	955.5006122879059	2	478.7579040527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSYQSVFL_	ENSG00000077585|ENST00000366592|GPR137B;ENST00000366591.4_1_1:236305922-236343463:+|nuORF;GPR137B|p.C85Y|1|0.27|ENSG00000077585|chr1:236142876-236142876|G/A|missense_variant	57.81127852772723	0.5234495074909924	6				NaN	NaN	0	NaN	12158	3974	16132
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16135	40.605	NaN	4127.6	30	0	671.04	0.106	+			29677	PGRGQETL	8	62	429.2292890047835	NaN	0	429.22930908203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PGRGQETL_	ENST00000531473.5_1_8:144695082-144696778:-|nuORF	53.351449002276354	1.7418937515398478	6				NaN	NaN	0	NaN	12159	3974	16132
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16136	40.607	NaN	3406.4	30	0	381.18	0.106	+			27677	MPTVHYEF	8	63	512.2333367015161	1022.4521204698323	2	512.2340698242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MPTVHYEF_	ENSG00000136518|ENST00000429709|ACTL6A;nc|ENSG00000136518|O96019-2|ACTL6A	65.80317337860623	0.44433089765398776	6				NaN	NaN	0	NaN	12160	3974	16132
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16137	40.609	NaN	2381.2	30	0	192.28	0.106	+			24920	LKQQLALY	8	67	488.79390085002905	975.5732487668581	2	488.7944030761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LKQQLALY_	ENSG00000084652|ENST00000373610|TXLNA	42.47446043378293	0.6409579893742323	6				NaN	NaN	0	NaN	12161	3974	16132
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16138	40.611	NaN	3685.2	30	0	273.84	0.035	+			13383	GLCIHCSLQG	10	70	515.745315069275	1029.4760772053498	2	515.74609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GLCIHCSLQG_	ENSG00000180113|ENST00000316081|TDRD6;nc|ENSG00000180113|O60522-2|TDRD6;TDRD6|p.L1636Qfs*6|1|0.06|ENSG00000180113|chr6:46693034-46693035|-/AAAG|frameshift_variant	39.252832667884924	0.5560298534376815	6				NaN	NaN	0	NaN	12162	3974	16132
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16139	40.611	NaN	2350.2	30	0	352.3	0.14			+	46412	VEPISTPTY	9	59	503.75743319708175	1005.5003134609635	2	503.7579345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VEPISTPTY_	REV__ENSG00000145734|ENST00000358731|BDP1;REV__nc|ENSG00000145734|A6H8Y1-6|BDP1;REV__nc|ENSG00000145734|A6H8Y1-7|BDP1;REV__nc|ENSG00000145734|A6H8Y1-8|BDP1	37.15910966729921	0.4535818937225704	6				NaN	NaN	0	NaN	12163	3974	16132
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16150	40.636	NaN	8839.7	30	0	1295.5	0.214	+			16320	HEIVQTLSL	9	70	520.2915022501763	1038.5684515671526	2	520.2922973632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HEIVQTLSL_	ENSG00000143416|ENST00000368868|SELENBP1;ENST00000427977.6_1_1:151337413-151341586:-|nuORF;ENST00000443708.5_1_1:151337021-151341586:-|nuORF;ENST00000455397.5_1_1:151337021-151341586:-|nuORF;ENST00000474352.5_1_1:151338696-151341653:-|nuORF;nc|ENSG00000143416|Q13228-2|SELENBP1;nc|ENSG00000143416|Q13228-3|SELENBP1;nc|ENSG00000143416|Q13228-4|SELENBP1	47.95952297671804	0.32689736945648856	6				NaN	NaN	0	NaN	12171	3977	16149
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16151	40.64	NaN	3601.2	30	0	401.17	0.106	+			17741	IEQEIRIL	8	69	507.30243820605085	1012.5903234789017	2	507.3030090332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IEQEIRIL_	ENSG00000136758|ENST00000376016|YME1L1;nc|ENSG00000136758|Q96TA2-3|YME1L1;nc|ENSG00000136758|Q96TA2|YME1L1	49.44154591367651	0.597725784090933	6				NaN	NaN	0	NaN	12172	3977	16149
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16152	40.642	NaN	3933.4	30	0	334.66	0.106			+	48701	VTTKPDKGAL	10	68	515.2999438092762	1028.5853346853523	2	515.3004150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTTKPDKGAL_	REV__ENSG00000156414|ENST00000409874|TDRD9;REV__nc|ENSG00000156414|Q8NDG6-2|TDRD9	78.26377905018397	0.20980573808910843	6				NaN	NaN	0	NaN	12173	3977	16149
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16153	40.644	NaN	3669.2	30	0	246.34	0.106			+	-1	RMALCLIL	8	66	495.2841332692502	988.5537136053005	2	495.284423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_RMALC(Carbamidomethyl (C))LIL_	REV__ENSG00000112282|ENST00000368068|MED23;REV__MED23|p.F896Lfs*5|1|0.27|ENSG00000112282|chr6:131596608-131596608|A/-|frameshift_variant;REV__MED23|p.H1213Mfs*26|1|0.32|ENSG00000112282|chr6:131591362-131591362|G/-|frameshift_variant;REV__nc|ENSG00000112282|Q9ULK4-3|MED23;REV__nc|ENSG00000112282|Q9ULK4-4|MED23;REV__nc|ENSG00000112282|Q9ULK4-5|MED23	62.97842346883844	0.4722955155785405	6				NaN	NaN	0	NaN	12174	3977	16149
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16154	40.645	NaN	3340.8	30	0	326.03	0.106	+			30019	PPLSVPPPISP	11	70	550.8205484445363	1099.6265439558724	2	550.8211669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PPLSVPPPISP_	nc|ENSG00000175727|Q9HAP2-5|MLXIP	45.97224482568171	0.4762245054624163	6				NaN	NaN	0	NaN	12175	3977	16149
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16155	40.647	NaN	1313.3	30	0	231.22	0.106				-1	 	0	41	433.7521843703366	865.4898158074732	2	433.7522277832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12176	3977	16149
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16156	40.649	NaN	1876.7	30	0	150.46	0.037	+			3431	ASQLDCNFLK	10	63	569.7818450159522	1137.5491370987043	2	569.7821655273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASQLDCNFLK_	ENSG00000100519|ENST00000445930|PSMC6;ENST00000458604.6_1_14:53173986-53184887:+|nuORF	56.43379154798735	0.3982744522255666	6				NaN	NaN	0	NaN	12177	3977	16149
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16171	40.68	NaN	27984	30	0	6970.9	0.214				-1	 	0	74	479.32009443866616	956.6256359441323	2	479.320556640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12189	3980	16170
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16172	40.684	NaN	11932	30	0	1640	0.106			+	18553	ISNGHLYL	8	81	458.74714146335396	915.4797299935079	2	458.7475280761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ISNGHLYL_	REV__ENSG00000184154|ENST00000289488|LRRC51;REV__ENST00000307198.11_1_11:71791888-71817176:+|nuORF;REV__ENST00000412777.6_1_11:71791888-71806143:+|nuORF;REV__ENST00000539587.5_1_11:71791910-71806563:+|nuORF;REV__nc|ENSG00000184154|Q96E66-2|LRRC51;REV__nc|ENSG00000184154|Q96E66-3|LRRC51;REV__nc|ENSG00000184154|Q96E66-4|LRRC51;REV__nc|ENSG00000184154|Q96E66-5|LRRC51;REV__nc|ENSG00000184154|Q96E66-6|LRRC51	85.35947970620816	0.2915182781752196	6				NaN	NaN	0	NaN	12190	3980	16170
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16173	40.686	NaN	3554.7	30	0	239.62	0.106	+			2432	APFRSEVCF	9	65	528.2531162475859	NaN	0	528.2529907226562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_APFRSEVCF_	ENSG00000163938|ENST00000418458|GNL3;nc|ENSG00000163938|Q9BVP2-2|GNL3	44.377184641726394	0.24544280798894275	6				NaN	NaN	0	NaN	12191	3980	16170
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16174	40.688	NaN	6253.1	30	0	1025.4	0.106			+	7002	CRLVTPQFL	9	73	538.7994194990944	1075.5842860649886	2	539.3015747070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_CRLVTPQFL_	REV__ENSG00000143195|ENST00000271417|ILDR2;REV__ILDR2|p.N157Mfs*117|1|0.23|ENSG00000143195|chr1:166956762-166956762|T/-|frameshift_variant	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	12192	3980	16170
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16175	40.69	NaN	3116.6	30	0	316.64	0.106				-1	ESLIKMIA	8	62	460.75880407416855	919.5030552151371	2	460.7597351074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_ESLIKM(Oxidation (M))IA_	SCN1A|p.I173M|1|0.08|ENSG00000144285|chr2:166054721-166054721|A/C|missense_variant	65.80317337860623	0.44433089765398776	6				NaN	NaN	0	NaN	12193	3980	16170
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16176	40.691	NaN	2058	30	0	207.42	0.106	+			2145	ALLDITVTK	9	63	487.2996394738191	972.5847260144383	2	487.29962158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ALLDITVTK_	nc|ENSG00000136141|Q9Y2L9-2|LRCH1	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	12194	3980	16170
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16177	40.693	NaN	4271.1	30	0	471.84	0.036	+			3345	ASMSAFDPLK	10	67	533.7651045360094	1065.5156561388187	2	534.2636108398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASMSAFDPLK_	ENSG00000114354|ENST00000240851|TFG;nc|ENSG00000114354|Q92734-2|TFG;nc|ENSG00000114354|Q92734-3|TFG;nc|ENSG00000114354|Q92734-4|TFG;TFG|p.N173K|2|0.38|ENSG00000114354|chr3:100732611-100732611|C/A|missense_variant	54.722347961057174	0.4138398245444204	6				NaN	NaN	0	NaN	12195	3980	16170
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16194	40.728	NaN	17183	30	0	2317.8	0.214	+			8304	EAIRISPTF	9	78	517.2869584387458	1032.5593639442916	2	517.2877197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EAIRISPTF_	ENSG00000147162|ENST00000373719|OGT;nc|ENSG00000147162|O15294-2|OGT;nc|ENSG00000147162|O15294-3|OGT;nc|ENSG00000147162|O15294-4|OGT	145.15565482312357	0.00806134135205793	6				NaN	NaN	0	NaN	12209	3983	16193
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16195	40.732	NaN	3339.6	30	0	483.28	0.106				-1	 	0	56	446.2315982228028	890.4486435124056	2	446.2319030761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12210	3983	16193
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16196	40.734	NaN	5586.1	30	0	2538.9	0.106	+			33750	RPRALRSW	8	70	521.3076774067285	1040.600801880257	2	521.3088989257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RPRALRSW_	ENST00000464420.5_1_3:67705264-67705402:+|nuORF	45.9519527083369	0.6193794311207887	6				NaN	NaN	0	NaN	12211	3983	16193
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16197	40.736	NaN	5377.6	30	0	774.09	0.106	+			3346	ASMSAFDPLK	10	74	533.7651045360094	1065.5156561388187	2	533.7684936523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASMSAFDPLK_	ENSG00000114354|ENST00000240851|TFG;nc|ENSG00000114354|Q92734-2|TFG;nc|ENSG00000114354|Q92734-3|TFG;nc|ENSG00000114354|Q92734-4|TFG;TFG|p.N173K|2|0.38|ENSG00000114354|chr3:100732611-100732611|C/A|missense_variant	112.10723106719422	0.0417416748461292	6				NaN	NaN	0	NaN	12212	3983	16193
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16198	40.737	NaN	2227.1	30	0	153.51	0.106			+	29239	NWELTLSQI	9	70	552.2896912405416	1102.5648295478832	2	553.2763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NWELTLSQI_	REV__ENSG00000169683|ENST00000306688|LRRC45	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	12213	3983	16193
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16199	40.739	NaN	2501.9	30	0	211.11	0.106				-1	 	0	54	369.21162394425073	736.4086949553015	2	369.21173095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12214	3983	16193
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16200	40.741	NaN	2406.4	30	0	186.85	0.034			+	17907	IGGLVASIGAI	11	64	485.7990688335073	969.5835847338146	2	485.8000793457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IGGLVASIGAI_	REV__ENSG00000100427|ENST00000311597|MLC1;REV__nc|ENSG00000100427|Q15049-2|MLC1	39.252832667884924	0.5681665794958463	6				NaN	NaN	0	NaN	12215	3983	16193
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16215	40.773	NaN	35174	30	0	6317.8	0.214	+			40641	SVAQLLLSK	9	87	479.7995587156918	957.5845644981836	2	479.800048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVAQLLLSK_	ENSG00000073614|ENST00000399788|KDM5A;ENST00000541335.1_1_12:431581-432275:-|nuORF;KDM5A|p.G1200Dfs*9|1|0.28|ENSG00000073614|chr12:307787-307787|T/-|frameshift_variant;KDM5A|p.V1093*|1|0.32|ENSG00000073614|chr12:309905-309905|T/-|frameshift_variant;KDM5A|p.V1093Sfs*20|1|0.21|ENSG00000073614|chr12:309904-309905|-/T|frameshift_variant;nc|ENSG00000073614|P29375-2|KDM5A	112.2953585152457	0.026655838328212944	6				NaN	NaN	0	NaN	12227	3986	16214
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16216	40.776	NaN	11139	30	0	1583.1	0.106				-1	VYYNCSCI	8	73	511.20874587332605	1020.4029388134521	2	511.2099304199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_VYYNC(Carbamidomethyl (C))SCI_	ENSG00000173930|ENST00000310954|SLCO4C1	50.0245360154114	0.5941082100236891	6				NaN	NaN	0	NaN	12228	3986	16214
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16217	40.778	NaN	4295.1	30	0	786.22	0.106	+			18442	ISCVNLAFK	9	68	497.77262135403447	993.530689774869	2	497.77313232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ISCVNLAFK_	ENST00000227758.6_3_11:102219989-102220022:+|nuORF	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	12229	3986	16214
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16218	40.78	NaN	3305	30	0	610.33	0.106	+			48209	VTAPIALLK	9	60	463.3074189568419	924.6002849804838	2	463.30780029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTAPIALLK_	ENSG00000103502|ENST00000219789|CDIPT;nc|ENSG00000103502|O14735-3|CDIPT	74.25504064058377	0.12238981753128622	6				NaN	NaN	0	NaN	12230	3986	16214
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16219	40.782	NaN	1355	30	0	100	0.106				-1	 	0	46	347.1982823180995	692.382011702999	2	347.198974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12231	3986	16214
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16220	40.783	NaN	8715.2	30	0	780.82	0.036	+			43246	TEWEKVAQL	9	77	552.2896912405416	1102.5648295478832	2	552.2908935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TEWEKVAQL_	ENSG00000175416|ENST00000310418|CLTB;nc|ENSG00000175416|P09497-2|CLTB	88.17693792209575	0.07000514020414955	6				NaN	NaN	0	NaN	12232	3986	16214
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16221	40.784	NaN	5888.4	30	0	690.73	0.14	+			42090	SYGSVFKAI	9	59	486.2631878501916	NaN	0	486.2638854980469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SYGSVFKAI_	ENSG00000104375|ENST00000419617|STK3;nc|ENSG00000104375|Q13188-2|STK3;STK3|p.N442Ifs*2|1|0.33|ENSG00000104375|chr8:98455993-98455993|T/-|frameshift_variant	107.00750918261382	0.012399597248013027	6				NaN	NaN	0	NaN	12233	3986	16214
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16233	40.902	NaN	45026	30	0	6954	0.214				-1	 	0	83	519.2968739241413	1036.5791949150826	2	519.2977294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12242	3989	16232
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16234	40.906	NaN	15339	30	0	2118	0.106	+			839	AEGKEVLLL	9	80	486.29164067948244	970.5687284257649	2	486.2917175292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEGKEVLLL_	CEACAM6|p.I217Mfs*11|3|0.07|ENSG00000086548|chr19:41761474-41761475|-/G|frameshift_variant;ENSG00000079385|ENST00000161559|CEACAM1;ENSG00000086548|ENST00000199764|CEACAM6;ENSG00000105388|ENST00000221992|CEACAM5;ENSG00000124469|ENST00000244336|CEACAM8;ENSG00000170956|ENST00000357396|CEACAM3;ENST00000344391.9_1_19:43023158-43032553:-|nuORF;ENST00000377806.7_1_19:43023094-43032607:-|nuORF;ENST00000403136.1_1_19:43025413-43032607:-|nuORF;nc|ENSG00000079385|P13688-10|CEACAM1;nc|ENSG00000079385|P13688-11|CEACAM1;nc|ENSG00000079385|P13688-2|CEACAM1;nc|ENSG00000079385|P13688-3|CEACAM1;nc|ENSG00000079385|P13688-4|CEACAM1;nc|ENSG00000079385|P13688-5|CEACAM1;nc|ENSG00000079385|P13688-6|CEACAM1;nc|ENSG00000079385|P13688-7|CEACAM1;nc|ENSG00000079385|P13688-8|CEACAM1;nc|ENSG00000079385|P13688-9|CEACAM1;nc|ENSG00000105388|P06731-2|CEACAM5;nc|ENSG00000170956|P40198-2|CEACAM3;nc|ENSG00000170956|P40198-3|CEACAM3	70.8162118820467	0.13725933411854815	6				NaN	NaN	0	NaN	12243	3989	16232
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16235	40.908	NaN	12644	30	0	1707.3	0.106	+			3575	ASVAWAVLK	9	74	472.7811279224091	943.5477029116182	2	472.7815246582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASVAWAVLK_	ENSG00000106714|ENST00000297668|CNTNAP3;ENSG00000154529|ENST00000377561|CNTNAP3B;ENSG00000283378|ENST00000636699|CNTNAP3C;nc|ENSG00000154529|Q96NU0-2|CNTNAP3B;nc|ENSG00000283378|Q9BZ76-2|CNTNAP3	153.03582135801034	0.006161527642367307	6				NaN	NaN	0	NaN	12244	3989	16232
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16236	40.91	NaN	7057.5	30	0	2869.8	0.106	+			37588	SLPDLTTPLK	10	74	542.8155267949999	1083.6165006567996	2	542.8162841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLPDLTTPLK_	ENSG00000005483|ENST00000311117|KMT2E;KMT2E|p.K873Nfs*8|4|0.41|ENSG00000005483|chr7:105106538-105106538|A/-|frameshift_variant;KMT2E|p.L1610Cfs*16|1|0.09|ENSG00000005483|chr7:105112580-105112580|T/-|frameshift_variant;nc|ENSG00000005483|Q8IZD2-2|KMT2E;nc|ENSG00000005483|Q8IZD2-5|KMT2E;nc|ENSG00000005483|Q8IZD2-6|KMT2E;nc|ENSG00000005483|Q8IZD2-7|KMT2E;nc|ENSG00000005483|Q8IZD2-8|KMT2E	70.8162118820467	0.27065172005956	6				NaN	NaN	0	NaN	12245	3989	16232
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16237	40.911	NaN	9794.1	30	0	2404	0.106	+			5480	AVAAFVLYK	9	66	491.29145620811977	980.5683594830396	2	491.291748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVAAFVLYK_	CCDC107|p.A74V|1|0.5|ENSG00000159884|chr9:35658690-35658690|C/T|missense_variant;ENSG00000159884|ENST00000426546|CCDC107;nc|ENSG00000159884|Q8WV48-2|CCDC107;nc|ENSG00000159884|Q8WV48-3|CCDC107;nc|ENSG00000159884|Q8WV48-4|CCDC107;nc|ENSG00000159884|Q8WV48-5|CCDC107	87.69643885390035	0.07135982304947239	6				NaN	NaN	0	NaN	12246	3989	16232
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16238	40.913	NaN	5065.2	30	0	1552.6	0.035			+	13403	GLFGPKPLLA	10	58	506.8125673074973	1011.6105816817947	2	506.8130798339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GLFGPKPLLA_	REV__ENSG00000130675|ENST00000252971|MNX1	35.15202426646627	0.5927656479315102	6				NaN	NaN	0	NaN	12247	3989	16232
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16239	40.914	NaN	2741	30	0	289.69	0.138	+			46601	VFRVGSVL	8	59	438.76833078542944	875.5221086376589	2	438.7684631347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VFRVGSVL_	ENSG00000073578|ENST00000264932|SDHA;ENST00000503674.5_1_5:250762-256532:+|nuORF;ENST00000505555.5_1_5:218470-251793:+|nuORF;ENST00000509082.1_1_5:240570-256462:+|nuORF;ENST00000515467.2_1_5:1572396-1576767:-|nuORF;ENST00000515752.5_1_5:236500-256532:+|nuORF;nc|ENSG00000073578|P31040-2|SDHA;nc|ENSG00000073578|P31040-3|SDHA	87.75429964447693	0.2842685068779738	6				NaN	NaN	0	NaN	12248	3989	16232
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16257	40.953	NaN	6132.7	30	0	667.67	0.214			+	-1	LHFCKCKTY	9	69	600.2889250623906	1198.5632971915811	2	600.2904663085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_LHFCKC(Carbamidomethyl (C))KTY_	REV__nc|ENSG00000268758|Q86SQ3|ADGRE4P	38.80614096846853	0.43426287593479557	6				NaN	NaN	0	NaN	12263	3992	16256
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16258	40.957	NaN	3413.3	30	0	136.31	0.106	+			30783	QDYLVSLTR	9	76	547.7981568260652	NaN	0	547.79833984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QDYLVSLTR_	ENSG00000166908|ENST00000354947|PIP4K2C;nc|ENSG00000166908|Q8TBX8-3|PIP4K2C	58.22992032128504	0.15686832049467786	6				NaN	NaN	0	NaN	12264	3992	16256
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16259	40.959	NaN	5291.8	30	0	664.95	0.106				-1	 	0	69	578.7754871057533	1155.5364212783065	2	578.7765502929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12265	3992	16256
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16260	40.96	NaN	2887	30	0	288.67	0.106	+			36254	SENINAVTL	9	63	480.7528009814077	959.4910490296154	2	480.7532958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SENINAVTL_	ENSG00000144674|ENST00000361924|GOLGA4;GOLGA4|p.N1805Kfs*18|1|0.11|ENSG00000144674|chr3:37327293-37327294|-/A|frameshift_variant;GOLGA4|p.N1805Tfs*6|1|0.38|ENSG00000144674|chr3:37327294-37327294|A/-|frameshift_variant;nc|ENSG00000144674|Q13439-3|GOLGA4;nc|ENSG00000144674|Q13439-4|GOLGA4;nc|ENSG00000144674|Q13439-5|GOLGA4	66.96192283764107	0.15557981141143568	6				NaN	NaN	0	NaN	12266	3992	16256
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16261	40.962	NaN	3931.8	30	0	328.41	0.106			+	32642	QYVKRGRL	8	70	510.30964594292846	1018.6047389526569	2	510.3108825683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QYVKRGRL_	REV__ENSG00000243725|ENST00000371281|TTC4;REV__ENST00000486091.1_1_1:55203206-55207183:+|nuORF	47.91560031466742	0.6071945918984287	6				NaN	NaN	0	NaN	12267	3992	16256
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16262	40.964	NaN	4729.4	30	0	765.76	0.106			+	37795	SLYVGLIAGY	10	68	528.2915264365685	1054.5684999399368	2	528.2908935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLYVGLIAGY_	REV__ENSG00000188269|ENST00000322301|OR7A5;REV__OR7A5|p.M284Cfs*2|1|0.15|ENSG00000188269|chr19:14827393-14827393|G/-|frameshift_variant	53.351449002276354	0.42630798468005626	6				NaN	NaN	0	NaN	12268	3992	16256
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16263	40.966	NaN	3040.5	30	0	123	0.036	+			27590	MPLAFSDKY	9	78	536.2617991282767	1070.5090453233533	2	536.2631225585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MPLAFSDKY_	ENSG00000132912|ENST00000447998|DCTN4;ENST00000519313.5_1_5:150110976-150138143:-|nuORF;nc|ENSG00000132912|Q9UJW0-2|DCTN4	80.45461616416974	0.09558281504443908	6				NaN	NaN	0	NaN	12269	3992	16256
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16277	40.996	NaN	7183.7	30	0	1463.7	0.214	+			25560	LPWEVQRY	8	76	545.7870668545037	1089.5595807758073	2	545.7882690429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LPWEVQRY_	ENSG00000140279|ENST00000389039|DUOX2;nc|ENSG00000140279|Q9NRD8|DUOX2	93.19546047674547	0.2677966331495483	6				NaN	NaN	0	NaN	12280	3995	16276
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16278	40.999	NaN	9401.2	30	0	851.88	0.106			+	37284	SLANTFAGVI	10	70	496.77363252365296	991.532712114106	2	496.7739562988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLANTFAGVI_	REV__nc|ENSG00000285253|Q6N043-3|ZNF280D	51.19269402634007	0.44601001148513897	6				NaN	NaN	0	NaN	12281	3995	16276
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16279	41.001	NaN	4289.6	30	0	305.8	0.106			+	26340	LSYIRQSSL	9	74	533.798174961098	1065.5817969889958	2	533.7993774414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSYIRQSSL_	REV__ENST00000302190.8_1_8:97506012-97605724:+|nuORF;REV__ENST00000518385.5_3_8:97506087-97614626:+|nuORF;REV__ENST00000519587.1_1_8:97506087-97541446:+|nuORF	51.19269402634007	0.2889735674168909	6				NaN	NaN	0	NaN	12282	3995	16276
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16280	41.003	NaN	1959.9	30	0	238.28	0.106	+			1354	AEVDLPKL	8	53	442.7573146323992	883.5000763315984	2	442.7574157714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEVDLPKL_	ENSG00000104872|ENST00000262265|PIH1D1;ENST00000595633.5_1_19:49949641-49950433:-|nuORF;ENST00000601053.5_2_19:49950039-49952749:-|nuORF;PIH1D1|p.Q250Sfs*6|1|0.25|ENSG00000104872|chr19:49446634-49446634|G/-|frameshift_variant	64.20726635412375	0.4601301477144759	6				NaN	NaN	0	NaN	12283	3995	16276
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16281	41.005	NaN	3556.4	30	0	480.99	0.106	+			29586	PFLSRSLPI	9	69	515.3091255721881	1028.6036982111762	2	515.3095092773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PFLSRSLPI_	ENSG00000204394|ENST00000375663|VARS1;ENST00000461328.1_1_6:31750434-31752201:-|nuORF;nc|ENSG00000204394|P26640-2|VARS1;VARS|p.A620Pfs*25|1|0.23|ENSG00000204394|chr6:31782750-31782750|C/-|frameshift_variant;VARS|p.L801Wfs*10|1|0.3|ENSG00000204394|chr6:31781707-31781707|A/-|frameshift_variant	52.936696900407355	0.27249468807391813	6				NaN	NaN	0	NaN	12284	3995	16276
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16282	41.007	NaN	5570.3	30	0	1668	0.038	+			25696	LRKNQSSEDI	10	49	397.21088778105457	1188.6108339433638	3	397.2109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LRKNQSSEDI_	ENSG00000143514|ENST00000343537|TP53BP2;nc|ENSG00000143514|Q13625-2|TP53BP2;nc|ENSG00000143514|Q13625|TP53BP2	23.04248740728303	0.69165701907106	6				NaN	NaN	0	NaN	12285	3995	16276
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16283	41.007	NaN	2407.8	30	0	261.39	0.141	+			7165	DAFWNSSKY	9	66	559.250441340142	1116.4863297470838	2	559.2510986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DAFWNSSKY_	ENSG00000138678|ENST00000264409|GPAT3;ENSG00000158669|ENST00000396987|GPAT4	33.921630207806714	0.48623198279849766	6				NaN	NaN	0	NaN	12286	3995	16276
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16298	41.041	NaN	9156.5	30	0	1551.1	0.214			+	13617	GLYLGSIMK	9	65	491.27506971437845	NaN	0	491.2749328613281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GLYLGSIMK_	REV__ENSG00000156510|ENST00000354624|HKDC1;REV__nc|ENSG00000156510|Q2TB90-2|HKDC1;REV__nc|ENSG00000156510|Q2TB90-3|HKDC1	79.71258880314673	0.07236858429579222	6				NaN	NaN	0	NaN	12298	3998	16297
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16299	41.044	NaN	4469.2	30	0	402.67	0.106	+			46565	VFKPISSTW	9	76	532.794096841563	1063.573640749926	2	532.79248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VFKPISSTW_	BIRC6|p.K3585Sfs*8|1|0.32|ENSG00000115760|chr2:32515171-32515171|A/-|frameshift_variant;BIRC6|p.S2648Ffs*25|1|0.08|ENSG00000115760|chr2:32487769-32487770|-/T|frameshift_variant;BIRC6|p.S3504Mfs*5|1|0.15|ENSG00000115760|chr2:32513095-32513098|TAGT/-|frameshift_variant;ENSG00000115760|ENST00000421745|BIRC6	118.74307786436346	0.02196067127630568	6				NaN	NaN	0	NaN	12299	3998	16297
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16300	41.046	NaN	6887.8	30	0	512.48	0.106				-1	 	0	86	496.3122990720652	990.6100452109304	2	496.3126525878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12300	3998	16297
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16301	41.048	NaN	4030.8	30	0	625.03	0.106	+			8676	EDVKMITSL	9	69	518.2729030308426	NaN	0	518.2730102539062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EDVKMITSL_	ENSG00000073111|ENST00000265056|MCM2;ENST00000474964.5_1_3:127323572-127340613:+|nuORF;ENST00000477668.5_1_3:127323572-127337961:+|nuORF	96.19043198914106	0.029117245125711146	6				NaN	NaN	0	NaN	12301	3998	16297
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16302	41.05	NaN	3118.3	30	0	377.79	0.106	+			23914	LDLKTILV	8	59	457.7990371673059	913.5835214014119	2	457.7992858886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LDLKTILV_	ENSG00000174482|ENST00000698399|LINGO2;LINGO2|p.F564Lfs*32|1|0.12|ENSG00000174482|chr9:27948980-27948980|A/-|frameshift_variant;LINGO2|p.M605*|1|0.27|ENSG00000174482|chr9:27948859-27948859|T/-|frameshift_variant	68.78682469695295	0.41700713582915416	6				NaN	NaN	0	NaN	12302	3998	16297
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16303	41.052	NaN	5094.3	30	0	1848.4	0.036			+	32598	QYINSLGFL	9	66	527.7825559660506	NaN	0	527.7824096679688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QYINSLGFL_	REV__tr|U7T126|U7T126_FUSNUAcyltransferase3domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00666PE=4SV=1	56.72105179125745	0.16330365735109603	6				NaN	NaN	0	NaN	12303	3998	16297
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16304	41.052	NaN	1991.5	30	0	168.08	0.139	+			36249	SEMVTIKL	8	57	460.7588340712715	919.503115209343	2	460.75970458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SEMVTIKL_	ENSG00000124201|ENST00000396105|ZNFX1	58.78195531508484	0.5138399468736706	6				NaN	NaN	0	NaN	12304	3998	16297
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16318	41.084	NaN	7255	30	0	2292.4	0.214	+			2893	ASATAFFLK	9	64	478.2653176719152	954.5160824106305	2	478.2657775878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASATAFFLK_	ENST00000225726.9_1_17:61843531-61850919:-|nuORF	95.81516180277367	0.04847050768394289	6				NaN	NaN	0	NaN	12315	4001	16317
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16319	41.088	NaN	5759.7	30	0	763.66	0.106			+	50228	WPAGLSAGSVA	11	71	508.2632367393325	1014.511920545465	2	508.2641906738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WPAGLSAGSVA_	REV__ENST00000381031.7_1_22:46689034-46689478:+|nuORF	53.59686742100583	0.38061189074210516	6				NaN	NaN	0	NaN	12316	4001	16317
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16320	41.089	NaN	5069.3	30	0	748.03	0.106	+			3724	ATAAVIFLH	9	61	471.7732148263505	941.531876719501	2	471.7735290527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATAAVIFLH_	ENSG00000120992|ENST00000316963|LYPLA1;ENST00000517297.5_1_8:54967680-55014407:-|nuORF;ENST00000519926.5_1_8:54966225-55014407:-|nuORF;ENST00000521856.1_1_8:55013466-55014395:-|nuORF;nc|ENSG00000120992|O75608-2|LYPLA1	97.47269410471826	0.04379738608259218	6				NaN	NaN	0	NaN	12317	4001	16317
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16321	41.091	NaN	4758.3	30	0	293.31	0.106				-1	TGMHTIAAQL	10	83	529.7673958687545	NaN	0	529.7672119140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_TGM(Oxidation (M))HTIAAQL_	ANKFY1|p.P691Rfs*61|1|0.4|ENSG00000185722|chr17:4182230-4182230|G/-|frameshift_variant;ENSG00000185722|ENST00000341657|ANKFY1;nc|ENSG00000185722|Q9P2R3-2|ANKFY1;nc|ENSG00000185722|Q9P2R3-4|ANKFY1	44.377184641726394	0.34115073642966565	6				NaN	NaN	0	NaN	12318	4001	16317
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16322	41.093	NaN	1968.7	30	0	195.05	0.106	+			28229	NAVVTVPAY	9	60	467.25516460316896	932.495776273138	2	467.2553405761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NAVVTVPAY_	ENSG00000109971|ENST00000534624|HSPA8;ENST00000454171.1_1_7:84657519-84657798:+|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000532167.5_1_11:122930757-122931830:-|nuORF;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;HSPA8|p.K569Dfs*6|1|0.3|ENSG00000109971|chr11:123058302-123058303|TC/-|frameshift_variant;nc|ENSG00000109971|P11142-2|HSPA8	74.25504064058377	0.12238981753128622	6				NaN	NaN	0	NaN	12319	4001	16317
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16323	41.095	NaN	1538.3	30	0	107.22	0.037	+			30370	PVIILASRPY	10	63	564.8428344726562	NaN	0	564.8428344726562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PVIILASRPY_	tr|U7SM56|U7SM56_FUSNUCoA-substrate-specificenzymeactivaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02088PE=4SV=1	31.529811441608018	0.39664753963064203	6				NaN	NaN	0	NaN	12320	4001	16317
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16324	41.095	NaN	2915	30	0	278.37	0.14	+			46142	VDNTQVPSY	9	67	511.74229029785596	1021.4700276625119	2	511.7796936035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VDNTQVPSY_	ENSG00000162065|ENST00000646147|TBC1D24;nc|ENSG00000162065|Q9ULP9-2|TBC1D24	47.657333605630114	0.33044192980041115	6				NaN	NaN	0	NaN	12321	4001	16317
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16337	41.125	NaN	7127.9	30	0	1387.5	0.213	+			19031	IYADNQVMHF	10	78	619.2865729710461	1236.558593008892	2	619.2869873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IYADNQVMHF_	ENSG00000177084|ENST00000320574|POLE;ENST00000537064.5_1_12:133201285-133234573:-|nuORF;POLE|p.A2030Pfs*18|1|0.14|ENSG00000177084|chr12:132632712-132632712|C/-|frameshift_variant	154.1183686248401	0.007764289751102599	6				NaN	NaN	0	NaN	12331	4004	16336
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16338	41.128	NaN	8733.4	30	0	1368.5	0.106	+			4164	ATFFGEVVK	9	61	499.27062021667905	996.5266875001581	2	499.27099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATFFGEVVK_	ENSG00000183527|ENST00000331573|PSMG1;nc|ENSG00000183527|O95456-2|PSMG1;PSMG1|p.T194Hfs*13|1|0.12|ENSG00000183527|chr21:39178524-39178524|T/-|frameshift_variant	109.47833844074708	0.029530294723441826	6				NaN	NaN	0	NaN	12332	4004	16336
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16339	41.13	NaN	1115.5	30	0	84.783	0.106				-1	 	0	37	347.1982823180995	692.382011702999	2	347.19873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12333	4004	16336
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16340	41.132	NaN	4073.2	30	0	596.25	0.106	+			18258	IPDKFVVGY	9	72	519.2874987031279	1036.5604444730557	2	519.2877197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IPDKFVVGY_	ENSG00000165704|ENST00000298556|HPRT1	79.71258880314673	0.09879134589249085	6				NaN	NaN	0	NaN	12334	4004	16336
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16341	41.134	NaN	2987.1	30	0	200.91	0.106				-1	 	0	58	369.21162394425073	736.4086949553015	2	369.21173095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12335	4004	16336
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16342	41.136	NaN	2467.1	30	0	676.09	0.038			+	45765	VAFPESINLAK	11	63	594.8337354871859	1187.6529180411717	2	594.835205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VAFPESINLAK_	REV__ARHGAP31|p.A1199Rfs*106|1|0.34|ENSG00000031081|chr3:119415522-119415522|G/-|frameshift_variant;REV__ENSG00000031081|ENST00000264245|ARHGAP31	47.95952297671804	0.44903247279694136	6				NaN	NaN	0	NaN	12336	4004	16336
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16343	41.136	NaN	1492.8	30	0	274.61	0.141	+			35977	SEGVSKVIF	9	53	483.2681920518007	964.5218311704015	2	483.2687072753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SEGVSKVIF_	ADRA1D|p.F384S|1|0.29|ENSG00000171873|chr20:4222091-4222091|A/G|missense_variant	32.81241826257853	0.4965981579233955	6				NaN	NaN	0	NaN	12337	4004	16336
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16358	41.169	NaN	5630.6	30	0	642.01	0.214	+			43194	TEVGPRFEL	9	69	524.2764978327175	1046.538442732235	2	524.2774658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEVGPRFEL_	ENSG00000136718|ENST00000259239|IMP4;ENST00000460766.5_1_2:131100637-131104038:+|nuORF;ENST00000475074.1_1_2:131103527-131104038:+|nuORF	82.7504851949679	0.08565546331141553	6				NaN	NaN	0	NaN	12349	4007	16357
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16359	41.173	NaN	5542	30	0	600.48	0.106	+			5917	AVLDYVMTR	9	72	534.280784283992	1066.547015634784	2	534.2818603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVLDYVMTR_	ENSG00000139826|ENST00000375898|ABHD13	68.84614121027924	0.14577793175421136	6				NaN	NaN	0	NaN	12350	4007	16357
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16360	41.175	NaN	3616.5	30	0	270.5	0.106	+			36167	SELEKTFNL	9	69	540.7814913632209	1079.5484297932417	2	540.7824096679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SELEKTFNL_	ENSG00000067066|ENST00000340126|SP100;ENSG00000185404|ENST00000415673|SP140L;nc|ENSG00000067066|P23497-2|SP100;nc|ENSG00000067066|P23497-3|SP100;nc|ENSG00000067066|P23497-5|SP100;nc|ENSG00000067066|P23497-6|SP100;nc|ENSG00000067066|P23497-7|SP100;nc|ENSG00000067066|P23497|SP100;nc|ENSG00000185404|Q9H930-1|SP140L;nc|ENSG00000185404|Q9H930-2|SP140L;nc|ENSG00000185404|Q9H930-3|SP140L;SP140L|p.F492Lfs*17|1|0.46|ENSG00000185404|chr2:230401414-230401414|T/-|frameshift_variant	68.84614121027924	0.14577793175421136	6				NaN	NaN	0	NaN	12351	4007	16357
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16361	41.177	NaN	2635.9	30	0	243.32	0.106			+	38672	SSIRFCFY	8	68	511.74229029785596	1021.4700276625119	2	511.74365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSIRFCFY_	REV__ENST00000412716.7_1_12:51636854-51636992:+|nuORF	52.29916861842294	0.578018602984656	6				NaN	NaN	0	NaN	12352	4007	16357
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16362	41.179	NaN	2820.6	30	0	201.24	0.106			+	-1	DLCKYFTI	8	68	530.2640046986637	NaN	0	530.2657470703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_DLC(Carbamidomethyl (C))KYFTI_	REV__sp|P16824|DUT_HCMVADeoxyuridine5'-triphosphatenucleotidohydrolaseOS=Humancytomegalovirus(strainAD169)OX=10360GN=DUTPE=3SV=1;REV__sp|Q6SW70|DUT_HCMVMDeoxyuridine5'-triphosphatenucleotidohydrolaseOS=Humancytomegalovirus(strainMerlin)OX=295027GN=DUTPE=3SV=1	31.954861631926434	1.7418937515398478	6				NaN	NaN	0	NaN	12353	4007	16357
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16363	41.18	NaN	2003.4	30	0	860.54	0.037			+	1097	AELFHHDPK	9	40	365.18731689453125	NaN	0	365.18731689453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AELFHHDPK_	REV__ENSG00000107147|ENST00000371757|KCNT1;REV__nc|ENSG00000107147|Q5JUK3-2|KCNT1;REV__nc|ENSG00000107147|Q5JUK3-4|KCNT1;REV__nc|ENSG00000107147|Q5JUK3|KCNT1	29.14955571784316	0.3303970763161698	6				NaN	NaN	0	NaN	12354	4007	16357
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16376	41.208	NaN	1799.2	30	0	400.62	0.214			+	-1	EFCWLTPY	8	62	558.2493625454459	NaN	0	558.2492065429688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_EFC(Carbamidomethyl (C))WLTPY_	REV__ENSG00000143994|ENST00000316470|ABHD1;REV__ENST00000489120.5_1_2:27346693-27351996:+|nuORF;REV__nc|ENSG00000143994|Q96SE0-3|ABHD1	44.53106598305862	1.7418937515398478	6				NaN	NaN	0	NaN	12364	4010	16375
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16377	41.211	NaN	2096.1	30	0	144.11	0.106	+			31656	QNARAHLI	8	61	461.7652344758278	921.5159160184556	2	461.76580810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QNARAHLI_	ENSG00000198198|ENST00000634258|SZT2;nc|ENSG00000198198|Q5T011-5|SZT2;SZT2|p.P2844Rfs*9|1|0.34|ENSG00000198198|chr1:43443669-43443669|C/-|frameshift_variant;SZT2|p.R3241Afs*11|1|0.33|ENSG00000198198|chr1:43448401-43448401|G/-|frameshift_variant	37.028477286268924	0.6747514403204248	6				NaN	NaN	0	NaN	12365	4010	16375
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16378	41.213	NaN	2936.1	30	0	961.09	0.106	+			51613	YYTPITPHL	9	67	552.78975601806	1103.5649591029198	2	553.292236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YYTPITPHL_	ENSG00000119314|ENST00000374257|PTBP3;nc|ENSG00000119314|O95758-1|PTBP3;nc|ENSG00000119314|O95758-2|PTBP3;nc|ENSG00000119314|O95758-4|PTBP3;nc|ENSG00000119314|O95758-5|PTBP3;nc|ENSG00000119314|O95758-7|PTBP3;nc|ENSG00000119314|O95758|PTBP3	35.61828744233558	0.47037581924408073	6				NaN	NaN	0	NaN	12366	4010	16375
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16379	41.215	NaN	1511.3	30	0	381.12	0.106				-1	 	0	44	432.08168722327036	NaN	0	432.0816955566406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12367	4010	16375
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16380	41.217	NaN	2247.3	30	0	394.17	0.106			+	24400	LGAAWRHGL	9	65	490.7740202564129	NaN	0	490.773193359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LGAAWRHGL_	REV__ENSG00000269743|ENST00000594199|SLC25A53	26.79610172149135	0.34227917631780574	6				NaN	NaN	0	NaN	12368	4010	16375
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16381	41.219	NaN	1285.2	30	0	144.46	0.035			+	24200	LEQQLKLL	8	55	492.8078308105469	NaN	0	492.8078308105469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LEQQLKLL_	REV__ENST00000507798.1_3_5:68471281-68471335:+|nuORF	47.657333605630114	1.7418937515398478	6				NaN	NaN	0	NaN	12369	4010	16375
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16382	41.219	NaN	3092.5	30	0	334.71	0.142	+			40955	SVFVETFVQK	10	70	592.3211077902935	1182.6276626473868	2	592.319580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVFVETFVQK_	ENSG00000170786|ENST00000303749|SDR16C5;nc|ENSG00000170786|Q8N3Y7-2|SDR16C5	134.7655990226056	0.012149689860786373	6				NaN	NaN	0	NaN	12370	4010	16375
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16396	41.251	NaN	6622.7	30	0	1013.7	0.214	+			42160	SYSQSSNLF	9	68	516.7348367295023	1031.4551205258044	2	516.7354125976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SYSQSSNLF_	ENSG00000172466|ENST00000261332|ZNF24;ENST00000589881.5_1_18:32917198-32917747:-|nuORF	124.08010499294276	0.018729767491916592	6				NaN	NaN	0	NaN	12381	4013	16395
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16397	41.254	NaN	10071	30	0	734.85	0.106			+	-1	PLMKRTLY	8	80	519.2964869160544	1036.5784208989087	2	519.2969360351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_PLM(Oxidation (M))KRTLY_	REV__tr|U7T386|U7T386_FUSNUCelldivisionproteinFtsAOS=FusobacteriumnucleatumCTI-5OX=1316586GN=ftsAPE=3SV=1	42.47446043378293	0.6409579893742323	6				NaN	NaN	0	NaN	12382	4013	16395
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16398	41.256	NaN	3186.5	30	0	351.1	0.106	+			51446	YVEKAVAVF	9	61	513.2865877625901	1024.55862259198	2	513.2868041992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YVEKAVAVF_	ENSG00000138821|ENST00000356736|SLC39A8;nc|ENSG00000138821|Q9C0K1-2|SLC39A8;nc|ENSG00000138821|Q9C0K1-3|SLC39A8;SLC39A8|p.E285Sfs*8|3|0.32|ENSG00000138821|chr4:102268068-102268068|T/-|frameshift_variant	60.97194046774394	0.20551255781574032	6				NaN	NaN	0	NaN	12383	4013	16395
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16399	41.258	NaN	4322.8	30	0	326.08	0.106	+			44030	TPMFVVKAY	9	73	528.282870697774	1054.551188462348	2	528.2839965820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TPMFVVKAY_	ENSG00000167658|ENST00000309311|EEF2	98.62937762414208	0.04060045538121712	6				NaN	NaN	0	NaN	12384	4013	16395
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16400	41.26	NaN	2091.5	30	0	133.95	0.106	+			41977	SVYDALPLTR	10	62	567.8097882724715	1133.6050236117428	2	568.3139038085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVYDALPLTR_	ATM|p.C1838Vfs*8|1|0.42|ENSG00000149311|chr11:108304687-108304687|T/-|frameshift_variant;ATM|p.G1642Wfs*23|1|0.78|ENSG00000149311|chr11:108297299-108297300|-/T|frameshift_variant;ATM|p.G2425Vfs*15|1|0.33|ENSG00000149311|chr11:108329204-108329204|G/-|frameshift_variant;ATM|p.K2303Rfs*7|2|0.24|ENSG00000149311|chr11:108326153-108326153|A/-|frameshift_variant;ATM|p.K2413Tfs*11|1|0.06|ENSG00000149311|chr11:108329168-108329169|-/CAACCAATTTAAATTAT|frameshift_variant;ATM|p.K2811Sfs*46|1|0.34|ENSG00000149311|chr11:108345750-108345750|A/-|frameshift_variant;ATM|p.L2231Wfs*4|1|0.52|ENSG00000149311|chr11:108325426-108325426|T/-|frameshift_variant;ATM|p.R1973Efs*17|1|0.26|ENSG00000149311|chr11:108310311-108310311|A/-|frameshift_variant;ENSG00000149311|ENST00000675843|ATM;ENST00000524792.5_1_11:108158320-108236232:+|nuORF;ENST00000531525.2_1_11:108160471-108165800:+|nuORF;ENST00000531957.1_1_11:108164147-108165800:+|nuORF	43.650786325866115	0.5155049133366767	6				NaN	NaN	0	NaN	12385	4013	16395
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16401	41.262	NaN	2299.9	30	0	298.76	0.038	+			34059	RSMNSALAFVD	11	66	605.798778156989	1209.5830033807779	2	605.7991333007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RSMNSALAFVD_	EIF3B|p.G633S|1|0.32|ENSG00000106263|chr7:2375396-2375396|G/A|missense_variant	42.242577148874844	0.5272577467055767	6				NaN	NaN	0	NaN	12386	4013	16395
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16416	41.293	NaN	8501.4	30	0	739.41	0.214	+			50687	YEELVRMV	8	82	519.7676385805179	1037.5207242278357	2	519.7686157226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YEELVRMV_	nc|ENSG00000092841|P60660-2|MYL6	90.36981228632155	0.27635063874291205	6				NaN	NaN	0	NaN	12398	4016	16415
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16417	41.297	NaN	6595.7	30	0	660.46	0.106	+			36028	SEILQANQL	9	81	508.27460158344604	1014.5346502336921	2	508.27508544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEILQANQL_	ENSG00000036054|ENST00000394144|TBC1D23;ENST00000486274.5_1_3:99980342-100042509:+|nuORF;nc|ENSG00000036054|Q9NUY8-2|TBC1D23;TBC1D23|p.A351Ifs*23|1|0.05|ENSG00000036054|chr3:100299289-100299290|-/ATTCACA|frameshift_variant	93.1432384553994	0.056003526918089595	6				NaN	NaN	0	NaN	12399	4016	16415
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16418	41.299	NaN	2737.4	30	0	304.14	0.106	+			46802	VIAALTVPAL	10	66	484.31255205656146	966.6105511799229	2	484.31292724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VIAALTVPAL_	ENST00000494318.5_1_8:76320198-76402347:+|nuORF	40.5726180659479	0.5438686920517214	6				NaN	NaN	0	NaN	12400	4016	16415
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16419	41.3	NaN	5413.6	30	0	1182.8	0.106				-1	SAICSMQAL	9	68	490.7305292014896	979.4465054697793	2	490.7305603027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_SAIC(Carbamidomethyl (C))SMQAL_	ENST00000502341.5_1_5:141348723-141357950:+|nuORF;ENST00000511961.5_1_5:141354501-141357950:+|nuORF	49.536043120802724	0.308405419312776	6				NaN	NaN	0	NaN	12401	4016	16415
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16420	41.302	NaN	3325.8	30	0	143.99	0.106	+			29143	NVAEFVCKY	9	72	536.7616481533971	1071.5087433735941	2	536.76123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NVAEFVCKY_	ENSG00000204977|ENST00000378182|TRIM13;nc|ENSG00000204977|O60858-3|TRIM13	36.446750945000026	0.4619375763483977	6				NaN	NaN	0	NaN	12402	4016	16415
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16421	41.304	NaN	2380.5	30	0	288.11	0.036	+			42822	TEATMTFKY	9	67	546.2588104931257	1090.5030680530513	2	548.2601318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TEATMTFKY_	APOB|p.A2932Pfs*19|1|0.36|ENSG00000084674|chr2:21008074-21008074|C/-|frameshift_variant;APOB|p.G1921Efs*13|1|0.19|ENSG00000084674|chr2:21011106-21011106|C/-|frameshift_variant;APOB|p.K1043N|1|0.08|ENSG00000084674|chr2:21016642-21016642|C/A|missense_variant;APOB|p.K4541Sfs*8|1|0.34|ENSG00000084674|chr2:21001800-21001800|T/-|frameshift_variant;APOB|p.M1189*|1|0.34|ENSG00000084674|chr2:21015204-21015204|T/-|frameshift_variant;APOB|p.S3866Yfs*21|1|0.06|ENSG00000084674|chr2:21005271-21005272|-/TAAGAAAT|frameshift_variant;APOB|p.Y2149Vfs*2|2|0.29|ENSG00000084674|chr2:21010424-21010425|-/T|frameshift_variant;ENSG00000084674|ENST00000233242|APOB	30.503639358989545	0.5181749237905803	6				NaN	NaN	0	NaN	12403	4016	16415
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16422	41.305	NaN	2228.6	30	0	371.03	0.139	+			17445	IAVSCLTIK	9	55	474.28454859281294	946.5545442524259	2	474.2812805175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IAVSCLTIK_	ENSG00000154646|ENST00000284885|TMPRSS15;TMPRSS15|p.K775Nfs*58|1|0.41|ENSG00000154646|chr21:18294431-18294431|T/-|frameshift_variant;TMPRSS15|p.L776Tfs*15|1|0.21|ENSG00000154646|chr21:18294430-18294431|-/T|frameshift_variant;TMPRSS15|p.N484Tfs*4|1|0.28|ENSG00000154646|chr21:18341526-18341526|T/-|frameshift_variant	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	12404	4016	16415
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16436	41.336	NaN	6018.8	30	0	511.48	0.213			+	32021	QRMCWVLTY	9	76	600.2889250623906	1198.5632971915811	2	600.291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QRMCWVLTY_	REV__UROD|p.P32L|1|0.41|ENSG00000126088|chr1:45012981-45012981|C/T|missense_variant	37.15910966729921	0.4535818937225704	6				NaN	NaN	0	NaN	12415	4019	16435
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16437	41.34	NaN	5435.2	30	0	575.98	0.106	+			42609	TATEITESF	9	71	499.7376247733191	NaN	0	499.7377014160156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TATEITESF_	ENSG00000129003|ENST00000644861|VPS13C;nc|ENSG00000129003|Q709C8-2|VPS13C;nc|ENSG00000129003|Q709C8-3|VPS13C;nc|ENSG00000129003|Q709C8-4|VPS13C;VPS13C|p.E2463Nfs*18|1|0.25|ENSG00000129003|chr15:61920157-61920157|C/-|frameshift_variant;VPS13C|p.N3163Sfs*6|1|0.05|ENSG00000129003|chr15:61882732-61882733|-/TTATCATCAC|frameshift_variant;VPS13C|p.P3597Lfs*3|1|0.26|ENSG00000129003|chr15:61868732-61868732|G/-|frameshift_variant	113.41158876095287	0.006616183131571386	6				NaN	NaN	0	NaN	12416	4019	16435
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16438	41.342	NaN	3294	30	0	458.89	0.106	+			42656	TAVPTLLKY	9	64	503.300673167367	1004.586793401534	2	503.3033752441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TAVPTLLKY_	ENSG00000129235|ENST00000250101|TXNDC17;ENST00000571029.1_1_17:6544987-6546336:+|nuORF	58.22992032128504	0.22837015374068087	6				NaN	NaN	0	NaN	12417	4019	16435
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16439	41.343	NaN	3317	30	0	360.71	0.106			+	24071	LEKCFEELVI	10	75	611.8255004882812	NaN	0	611.8255004882812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LEKCFEELVI_	REV__ENSG00000151553|ENST00000369248|FHIP2A	75.04331003522576	0.12385377892588857	6				NaN	NaN	0	NaN	12418	4019	16435
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16440	41.345	NaN	4515.5	30	0	553.12	0.106	+			17703	IELRVTSL	8	60	465.78358512056576	929.5526173079315	2	465.784423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IELRVTSL_	ENSG00000155561|ENST00000285968|NUP205;NUP205|p.F1204Lfs*34|1|0.12|ENSG00000155561|chr7:135617163-135617163|T/-|frameshift_variant;NUP205|p.Q1211Kfs*27|1|0.25|ENSG00000155561|chr7:135617188-135617188|C/-|frameshift_variant	82.7504851949679	0.3006553482314138	6				NaN	NaN	0	NaN	12419	4019	16435
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16441	41.347	NaN	1691.8	30	0	119.21	0.037			+	6998	CRHWGSSRPA	10	67	578.7754871057533	1155.5364212783065	2	578.77734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_CRHWGSSRPA_	REV__ENST00000401985.3_1_5:179221106-179223480:+|nuORF	24.519189625965996	0.6795976720565101	6				NaN	NaN	0	NaN	12420	4019	16435
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16442	41.348	NaN	1647.5	30	0	170.28	0.14	+			49714	VYMGDKTKWI	10	44	414.21875	NaN	0	414.21875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VYMGDKTKWI_	ERMAP|p.V299M|1|0.31|ENSG00000164010|chr1:42842699-42842699|G/A|missense_variant	35.15202426646627	0.38475398474706135	6				NaN	NaN	0	NaN	12421	4019	16435
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16457	41.381	NaN	5632	30	0	819.39	0.214	+			8243	EAFLNNQEY	9	68	564.252993960255	1126.49143498731	2	564.25390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EAFLNNQEY_	ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1	134.7655990226056	0.012935733000282069	6				NaN	NaN	0	NaN	12433	4022	16456
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16458	41.385	NaN	8013.2	30	0	1164.5	0.106			+	766	AEELQALNQ	9	76	508.2575852882937	1014.5006176433874	2	508.2579650878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEELQALNQ_	REV__ENST00000567372.1_1_18:65945123-65945423:-|nuORF	46.45678178249821	0.34452392205506005	6				NaN	NaN	0	NaN	12434	4022	16456
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16459	41.386	NaN	6090.5	30	0	581.23	0.106	+			38448	SSAPKSFTV	9	73	483.2496526639872	964.4847523947744	2	483.747802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SSAPKSFTV_	ENSG00000150893|ENST00000280481|FREM2;FREM2|p.E511K|1|0.23|ENSG00000150893|chr13:38688875-38688875|G/A|missense_variant;FREM2|p.F2459Lfs*27|1|0.21|ENSG00000150893|chr13:38859443-38859443|T/-|frameshift_variant;FREM2|p.V1156Gfs*14|1|0.4|ENSG00000150893|chr13:38690806-38690807|-/G|frameshift_variant;nc|ENSG00000150893|Q5SZK8-2|FREM2	42.86426827375447	0.38666266728046506	6				NaN	NaN	0	NaN	12435	4022	16456
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16460	41.388	NaN	3229.7	30	0	313.19	0.106	+			30564	QALYHLSF	8	64	489.7553457702941	977.4961386073883	2	489.7554626464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QALYHLSF_	ENSG00000213171|ENST00000368820|LINGO4;LINGO4|p.L527Sfs*3|1|0.23|ENSG00000213171|chr1:151801126-151801127|-/A|frameshift_variant;LINGO4|p.L527Wfs*21|1|0.34|ENSG00000213171|chr1:151801127-151801127|A/-|frameshift_variant	57.81127852772723	0.5234495074909924	6				NaN	NaN	0	NaN	12436	4022	16456
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16461	41.39	NaN	2792.3	30	0	193.72	0.106				-1	LPSCQARKN	9	72	537.2785572226809	1072.5425615121617	2	537.2791137695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_LPSC(Carbamidomethyl (C))QARKN_	ENST00000592621.5_2_19:5927995-5941693:-|nuORF;ENST00000592771.5_1_19:5917623-5941693:-|nuORF	35.61828744233558	0.47037581924408073	6				NaN	NaN	0	NaN	12437	4022	16456
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16462	41.392	NaN	2184.7	30	0	170.51	0.036	+			19630	KDIVLNKEQ	9	68	543.8120716199908	NaN	0	543.8115844726562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KDIVLNKEQ_	tr|U7SSM4|U7SSM4_FUSNUPeptidaseTOS=FusobacteriumnucleatumCTI-5OX=1316586GN=pepTPE=3SV=1	38.753607047826485	0.28190821760017076	6				NaN	NaN	0	NaN	12438	4022	16456
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16463	41.392	NaN	1756.8	30	0	219.43	0.141	+			49765	VYQEMPAQL	9	59	539.7662012655369	NaN	0	539.765869140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VYQEMPAQL_	BCKDHA|p.R421H|1|0.12|ENSG00000248098|chr19:41424532-41424532|G/A|missense_variant;ENSG00000248098|ENST00000269980|BCKDHA;nc|ENSG00000248098|P12694-2|BCKDHA	31.529811441608018	0.3183796599642538	6				NaN	NaN	0	NaN	12439	4022	16456
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16476	41.422	NaN	7535.7	30	0	997.9	0.214	+			28170	NANRIALDF	9	77	517.2747169089761	1032.534880884752	2	517.2749633789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NANRIALDF_	ENSG00000131981|ENST00000254301|LGALS3;ENST00000556438.6_1_14:55604729-55611986:+|nuORF	115.49404669440601	0.023927554121326553	6				NaN	NaN	0	NaN	12449	4025	16475
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16477	41.425	NaN	6358.7	30	0	744.11	0.106	+			38562	SSFGGLILSK	10	72	504.78917665219234	1007.5638003711847	2	504.7895202636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSFGGLILSK_	ENSG00000114544|ENST00000360370|SLC41A3;ENST00000506102.5_1_3:125725861-125741959:-|nuORF;ENST00000512557.5_1_3:125725252-125741959:-|nuORF;nc|ENSG00000114544|Q96GZ6-2|SLC41A3;nc|ENSG00000114544|Q96GZ6-3|SLC41A3;nc|ENSG00000114544|Q96GZ6-4|SLC41A3;nc|ENSG00000114544|Q96GZ6-5|SLC41A3;nc|ENSG00000114544|Q96GZ6-6|SLC41A3;nc|ENSG00000114544|Q96GZ6-7|SLC41A3;nc|ENSG00000114544|Q96GZ6-8|SLC41A3;nc|ENSG00000114544|Q96GZ6|SLC41A3	133.9934435666947	0.012355562819581703	6				NaN	NaN	0	NaN	12450	4025	16475
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16478	41.427	NaN	4878.4	30	0	316.43	0.106	+			44534	TSWRDGMAF	9	81	535.7391925266558	1069.4638321201114	2	535.7400512695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TSWRDGMAF_	ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1;SPTBN1|p.K503Rfs*24|1|0.06|ENSG00000115306|chr2:54626095-54626095|G/-|frameshift_variant	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	12451	4025	16475
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16479	41.429	NaN	4922.1	30	0	709.86	0.106				-1	ASLLMVAKV	9	61	474.28454859281294	946.5545442524259	2	474.2863464355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_ASLLM(Oxidation (M))VAKV_	ENSG00000111843|ENST00000229563|TMEM14C;ENST00000466421.5_1_6:10723434-10730896:+|nuORF	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	12452	4025	16475
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16480	41.431	NaN	4466.9	30	0	721.99	0.106	+			46043	VCEEEVASVLV	11	69	588.793447236382	1175.572341539564	2	588.7943115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VCEEEVASVLV_	ENST00000538442.5_2_6:31462711-31462768:+|nuORF	47.657333605630114	0.4531673460382624	6				NaN	NaN	0	NaN	12453	4025	16475
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16481	41.432	NaN	1655.5	30	0	115.91	0.106	+			19018	IWGYSAVAAL	10	65	525.7854194514725	NaN	0	525.781494140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IWGYSAVAAL_	ENSG00000186188|ENST00000371481|FFAR4;nc|ENSG00000186188|Q5NUL3-1|FFAR4	37.15910966729921	0.3781637092648983	6				NaN	NaN	0	NaN	12454	4025	16475
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16482	41.434	NaN	1677.4	30	0	200.83	0.038	+			8489	EASLWSSGFGM	11	69	594.2582976081375	NaN	0	594.25830078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_EASLWSSGFGM(Oxidation (M))_	ENSG00000186281|ENST00000434632|GPAT2;ENST00000468438.1_1_2:96696661-96698107:-|nuORF;ENST00000484440.5_1_2:96688852-96698107:-|nuORF;ENST00000486463.5_1_2:96693672-96700654:-|nuORF;nc|ENSG00000186281|Q6NUI2-3|GPAT2;nc|ENSG00000186281|Q6NUI2|GPAT2	69.6276240434122	0.14037591385971868	6				NaN	NaN	0	NaN	12455	4025	16475
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16493	41.459	NaN	6590.8	30	0	2158.2	0.214	+			8767	EEIAFLKKL	9	78	545.8285424612886	1089.6425319893772	2	545.8295288085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EEIAFLKKL_	ENSG00000026025|ENST00000544301|VIM;ENST00000421459.2_2_10:17272631-17276850:+|nuORF	108.08749611321984	0.03094949498378333	6				NaN	NaN	0	NaN	12463	4028	16492
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16494	41.463	NaN	2822.5	30	0	1175.3	0.106	+			10212	ETGMSRRPAGP	11	69	579.7884974933269	1157.5624420534537	2	579.7891235351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ETGMSRRPAGP_	ENST00000318584.9_1_19:47260376-47260967:+|nuORF	47.657333605630114	0.4531673460382624	6				NaN	NaN	0	NaN	12464	4028	16492
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16495	41.465	NaN	2528.5	30	0	164.16	0.106	+			26328	LSWATILLSP	10	72	550.8205484445363	1099.6265439558724	2	550.82177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSWATILLSP_	ENSG00000160216|ENST00000291572|AGPAT3;ENST00000484865.1_1_21:45391291-45401085:+|nuORF;nc|ENSG00000160216|Q9NRZ7-2|AGPAT3;nc|ENSG00000160216|Q9NRZ7-3|AGPAT3	35.61828744233558	0.588957954432594	6				NaN	NaN	0	NaN	12465	4028	16492
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16496	41.467	NaN	6044.2	30	0	1115.2	0.106				-1	 	0	60	425.73649993443246	849.4584469356649	2	425.7365417480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12466	4028	16492
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16497	41.469	NaN	1135.2	30	0	102.63	0.106			+	13556	GLSRSENSKR	10	56	567.3062909274297	NaN	0	567.3062744140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GLSRSENSKR_	REV__nc|ENSG00000126883|P35658-5|NUP214	32.75053402867276	0.3926392905881664	6				NaN	NaN	0	NaN	12467	4028	16492
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16498	41.47	NaN	2262.1	30	0	309.11	0.035	+			901	AEIAEIARL	9	64	493.28672854179985	984.5589041503997	2	493.2866516113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEIAEIARL_	ENSG00000099814|ENST00000414716|CEP170B;nc|ENSG00000099814|Q9Y4F5-3|CEP170B;nc|ENSG00000099814|Q9Y4F5|CEP170B	56.43379154798735	0.2433427591689151	6				NaN	NaN	0	NaN	12468	4028	16492
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16512	41.5	NaN	13242	30	0	1408.5	0.214	+			43977	TPFKGGTLF	9	76	484.266207978252	966.517863023304	2	484.2659606933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TPFKGGTLF_	nc|ENSG00000120802|P42166|TMPO	104.0567914643314	0.03506238181059741	6				NaN	NaN	0	NaN	12479	4031	16511
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16513	41.504	NaN	4826.2	30	0	641.37	0.106	+			21902	KRSGRSNVL	9	69	508.80217617760957	1015.5897994220192	2	508.80303955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KRSGRSNVL_	ENST00000487138.5_1_2:95944180-95944300:+|nuORF	71.87747018426188	0.13267044672804276	6				NaN	NaN	0	NaN	12480	4031	16511
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16514	41.506	NaN	7085	30	0	716.92	0.106	+			28380	NELILKTL	8	65	472.2942737448053	942.5739945564106	2	472.294677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NELILKTL_	ENSG00000143179|ENST00000367879|UCK2	80.45461616416974	0.3197856089436126	6				NaN	NaN	0	NaN	12481	4031	16511
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16515	41.507	NaN	1650.8	30	0	104.75	0.106				-1	 	0	51	347.1982823180995	692.382011702999	2	347.19873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12482	4031	16511
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16516	41.509	NaN	3406.8	30	0	234.57	0.106	+			49652	VYINEVRVI	9	72	552.823964208403	1103.633375483606	2	552.8245849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VYINEVRVI_	ENSG00000164944|ENST00000297591|VIRMA;nc|ENSG00000164944|Q69YN4-2|VIRMA;nc|ENSG00000164944|Q69YN4-3|VIRMA;nc|ENSG00000164944|Q69YN4-4|VIRMA	58.22992032128504	0.22837015374068087	6				NaN	NaN	0	NaN	12483	4031	16511
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16517	41.511	NaN	2170.9	30	0	583.26	0.106			+	-1	QCLMLYPTM	9	66	558.2493625454459	NaN	0	558.2492065429688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_QCLMLYPTM(Oxidation (M))_	REV__ENSG00000188293|ENST00000437936|IGFL1	38.80614096846853	0.28164298475537564	6				NaN	NaN	0	NaN	12484	4031	16511
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16518	41.513	NaN	2434.1	30	0	739.03	0.037	+			32592	QYFPKAPEF	9	77	563.7820661663225	1125.5495793994448	2	563.7816772460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QYFPKAPEF_	ENSG00000090686|ENST00000308271|USP48;nc|ENSG00000090686|Q86UV5-2|USP48;nc|ENSG00000090686|Q86UV5-3|USP48;nc|ENSG00000090686|Q86UV5-5|USP48;nc|ENSG00000090686|Q86UV5-8|USP48;USP48|p.G702Wfs*5|1|0.12|ENSG00000090686|chr1:21706574-21706575|-/A|frameshift_variant;USP48|p.L982Ffs*9|1|0.08|ENSG00000090686|chr1:21690037-21690038|-/GG|frameshift_variant	71.87747018426188	0.13267044672804276	6				NaN	NaN	0	NaN	12485	4031	16511
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16531	41.54	NaN	7863.9	30	0	1268.6	0.214	+			49593	VYGFVREAL	9	67	527.2894114548543	1052.5642699765085	2	527.290283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYGFVREAL_	ENSG00000167671|ENST00000301281|UBXN6;ENST00000588238.1_1_19:4446018-4446171:-|nuORF;nc|ENSG00000167671|Q9BZV1-2|UBXN6	90.36981228632155	0.0638227155548745	6				NaN	NaN	0	NaN	12495	4034	16530
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16532	41.544	NaN	8960.4	30	0	716.76	0.106				-1	MMFKKPMY	8	76	546.2588104931257	1090.5030680530513	2	546.2605590820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_MMFKKPM(Oxidation (M))Y_	ENST00000372004.7_1_20:46254139-46254205:+|nuORF	52.29916861842294	0.578018602984656	6				NaN	NaN	0	NaN	12496	4034	16530
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16533	41.545	NaN	2846.9	30	0	218.99	0.106				-1	 	0	55	369.21162394425073	736.4086949553015	2	369.2119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12497	4034	16530
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16534	41.547	NaN	1644.7	30	0	253.91	0.106				-1	ISMENVPM	8	55	468.71355671708	NaN	0	468.7132568359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_ISM(Oxidation (M))ENVPM_	ENSG00000196712|ENST00000358273|NF1;ENST00000579081.5_2_17:29626598-29701170:+|nuORF;nc|ENSG00000196712|P21359-2|NF1;nc|ENSG00000196712|P21359-6|NF1	35.200714571348534	1.7418937515398478	6				NaN	NaN	0	NaN	12498	4034	16530
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16535	41.549	NaN	1215.7	30	0	66.766	0.106			+	47844	VSLDLAQI	8	53	429.7495930989928	NaN	0	429.7496643066406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSLDLAQI_	REV__ENSG00000105701|ENST00000608443|FKBP8;REV__FKBP8|p.Q182Kfs*17|1|0.36|ENSG00000105701|chr19:18539378-18539378|G/-|frameshift_variant;REV__nc|ENSG00000105701|Q14318|FKBP8	58.78195531508484	1.7418937515398478	6				NaN	NaN	0	NaN	12499	4034	16530
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16536	41.551	NaN	1269.8	30	0	144.66	0.106	+			26427	LTGGVWSL	8	47	416.73164377069435	831.4487346081887	2	416.7322082519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LTGGVWSL_	ENSG00000256269|ENST00000652429|HMBS;ENST00000542044.5_1_11:118959775-118963990:+|nuORF;ENST00000543543.5_1_11:118963098-118963990:+|nuORF;ENST00000546226.5_1_11:118963422-118963990:+|nuORF;nc|ENSG00000256269|P08397-2|HMBS;nc|ENSG00000256269|P08397-3|HMBS;nc|ENSG00000256269|P08397-4|HMBS	44.53106598305862	0.628196326904373	6				NaN	NaN	0	NaN	12500	4034	16530
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16537	41.553	NaN	1437.2	30	0	157.64	0.035	+			1146	AEMIKYIQ	8	61	498.2642577040999	994.5139624749999	2	498.2649841308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AEMIKYIQ_	ENST00000297979.9_1_9:97849004-97849358:+|nuORF	60.97194046774394	0.49215940876911696	6				NaN	NaN	0	NaN	12501	4034	16530
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16548	41.578	NaN	21563	30	0	3903.9	0.214	+			41253	SVLGQLGITK	10	81	508.310152434391	1014.605751935582	2	508.3108215332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVLGQLGITK_	ENSG00000197249|ENST00000393087|SERPINA1;ENST00000489769.1_1_14:94844788-94846995:-|nuORF;nc|ENSG00000197249|P01009-2|SERPINA1;SERPINA1|p.L377*|1|0.19|ENSG00000197249|chr14:94378576-94378576|A/-|frameshift_variant;SERPINA1|p.T369Rfs*3|1|0.05|ENSG00000197249|chr14:94378605-94378606|-/CCCC|frameshift_variant	163.46403022179925	0.005763553349397645	6				NaN	NaN	0	NaN	12509	4037	16547
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16549	41.581	NaN	3341.4	30	0	261.42	0.106	+			42773	TEAEIAHIAL	10	71	534.2896589281814	1066.5647649231628	2	534.29052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEAEIAHIAL_	ENSG00000137312|ENST00000376389|FLOT1	82.24051045832904	0.17731618517892733	6				NaN	NaN	0	NaN	12510	4037	16547
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16550	41.583	NaN	5342.5	30	0	418.1	0.106	+			6578	AYLEAYKEF	9	73	567.2796505445409	NaN	0	567.2793579101562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AYLEAYKEF_	ENSG00000139163|ENST00000266517|ETNK1;nc|ENSG00000139163|Q9HBU6|ETNK1	132.757866228626	0.00016231815605623974	6				NaN	NaN	0	NaN	12511	4037	16547
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16551	41.585	NaN	2553.5	30	0	266.59	0.106	+			42114	SYLENVDHF	9	66	562.2555263352224	1122.4964997372447	2	562.2568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SYLENVDHF_	ENSG00000108509|ENST00000348066|CAMTA2;ENST00000574951.5_1_17:4872053-4885503:-|nuORF;ENST00000576872.1_1_17:4872867-4875829:-|nuORF;nc|ENSG00000108509|O94983-2|CAMTA2;nc|ENSG00000108509|O94983-3|CAMTA2;nc|ENSG00000108509|O94983-4|CAMTA2;nc|ENSG00000108509|O94983-5|CAMTA2;nc|ENSG00000108509|O94983-6|CAMTA2	35.15202426646627	0.4747332964206883	6				NaN	NaN	0	NaN	12512	4037	16547
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16552	41.587	NaN	3613	30	0	762.63	0.106			+	17842	IFLNVSTLV	9	67	503.300673167367	1004.586793401534	2	503.80035400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IFLNVSTLV_	REV__ABCA1|p.L2013*|1|0.14|ENSG00000165029|chr9:104788457-104788457|A/-|frameshift_variant;REV__ENSG00000165029|ENST00000374736|ABCA1	31.954861631926434	0.5046124803899898	6				NaN	NaN	0	NaN	12513	4037	16547
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16553	41.589	NaN	982.28	30	0	87.337	0.106	+			48434	VTKKEVVI	8	46	458.29677551401375	NaN	0	458.2967224121094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTKKEVVI_	ENST00000525728.5_1_11:126081668-126110710:+|nuORF;ENST00000528985.5_2_11:126081668-126103543:+|nuORF;ENST00000530043.5_2_11:126081674-126099218:+|nuORF;ENST00000533050.5_2_11:126081479-126104922:+|nuORF	24.20275056022122	1.7418937515398478	6				NaN	NaN	0	NaN	12514	4037	16547
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16554	41.591	NaN	1751	30	0	246.2	0.035			+	25232	LNCSVDKRL	9	62	524.2864941429989	NaN	0	524.28759765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LNCSVDKRL_	REV__ENSG00000205693|ENST00000381273|MANSC4	44.377184641726394	0.24544280798894275	6				NaN	NaN	0	NaN	12515	4037	16547
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16566	41.616	NaN	9235.9	30	0	3478.6	0.214	+			11609	FPSSVTNTL	9	55	483.2496526639872	964.4847523947744	2	483.250244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FPSSVTNTL_	ENSG00000145113|ENST00000463781|MUC4;MUC4|p.L3985Ffs*274|1|0.3|ENSG00000145113|chr3:195779627-195779627|G/-|frameshift_variant;MUC4|p.N4902Tfs*8|1|0.37|ENSG00000145113|chr3:195761027-195761027|T/-|frameshift_variant;nc|ENSG00000145113|Q99102-10|MUC4;nc|ENSG00000145113|Q99102-11|MUC4;nc|ENSG00000145113|Q99102-15|MUC4;nc|ENSG00000145113|Q99102-16|MUC4;nc|ENSG00000145113|Q99102-17|MUC4;nc|ENSG00000145113|Q99102-2|MUC4;nc|ENSG00000145113|Q99102-3|MUC4;nc|ENSG00000145113|Q99102-5|MUC4;nc|ENSG00000145113|Q99102-7|MUC4;nc|ENSG00000145113|Q99102-8|MUC4;nc|ENSG00000145113|Q99102-9|MUC4	58.22992032128504	0.22837015374068087	6				NaN	NaN	0	NaN	12524	4040	16565
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16567	41.62	NaN	2683.4	30	0	195.43	0.106			+	8355	EALHSAEVAI	10	71	520.2763493759192	1038.5381458186382	2	520.2772216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EALHSAEVAI_	REV__ENSG00000010932|ENST00000617670|FMO1;REV__ENST00000469112.5_2_1:171244541-171251486:+|nuORF;REV__nc|ENSG00000010932|Q01740-2|FMO1	76.7741389293348	0.22197596950688292	6				NaN	NaN	0	NaN	12525	4040	16565
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16568	41.622	NaN	1913.2	30	0	175.52	0.106	+			27145	MAVGQVSSF	9	52	463.22576904296875	NaN	0	463.22576904296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MAVGQVSSF_	ABCB1|p.P1016Lfs*2|1|0.23|ENSG00000085563|chr7:87516546-87516546|G/-|frameshift_variant;ENSG00000085563|ENST00000622132|ABCB1;ENST00000488737.6_1_7:87133561-87160896:-|nuORF;nc|ENSG00000085563|P08183-2|ABCB1	113.41158876095287	0.006616183131571386	6				NaN	NaN	0	NaN	12526	4040	16565
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16569	41.623	NaN	2028.5	30	0	168.15	0.106	+			30391	PVPYGSLQLA	10	58	522.7890657965937	1043.5635786599873	2	522.7884521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PVPYGSLQLA_	ENSG00000130589|ENST00000467148|HELZ2;HELZ2|p.G2213Vfs*22|1|0.14|ENSG00000130589|chr20:63561876-63561876|C/-|frameshift_variant;HELZ2|p.R2206Vfs*29|2|0.28|ENSG00000130589|chr20:63561898-63561898|G/-|frameshift_variant;nc|ENSG00000130589|Q9BYK8-2|HELZ2;nc|ENSG00000130589|Q9BYK8|HELZ2	30.503639358989545	0.6307262373768582	6				NaN	NaN	0	NaN	12527	4040	16565
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16570	41.625	NaN	1886.2	30	0	312.77	0.106			+	30158	PSDVSVEALDE	11	44	387.5171081902819	NaN	0	387.5172119140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PSDVSVEALDE_	REV__ENSG00000135436|ENST00000257894|FAM186B;REV__ENST00000533372.1_1_12:49976813-49999059:-|nuORF;REV__nc|ENSG00000135436|Q8IYM0-2|FAM186B	36.31764250033197	0.4035636655321173	6				NaN	NaN	0	NaN	12528	4040	16565
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16571	41.627	NaN	2603.7	30	0	330.07	0.106	+			45136	TVKYPNPE	8	68	474.2446056409268	946.4746583486536	2	474.2445983886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TVKYPNPE_	ENSG00000169299|ENST00000381967|PGM2;ENST00000505986.5_1_4:37841281-37848924:+|nuORF;nc|ENSG00000169299|Q96G03-2|PGM2	49.44154591367651	0.597725784090933	6				NaN	NaN	0	NaN	12529	4040	16565
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16572	41.629	NaN	1679.4	30	0	97.919	0.036	+			50475	YAIDRYASF	9	65	553.2687374310779	1104.5229219289556	2	553.7711181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YAIDRYASF_	tr|U7SMX2|U7SMX2_FUSNUdTMPkinaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01731PE=3SV=1	56.72105179125745	0.24094814563026265	6				NaN	NaN	0	NaN	12530	4040	16565
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16585	41.659	NaN	5347	30	0	572.02	0.214	+			11842	FTADVRSVL	9	73	504.27875061018335	1006.5429482871667	2	504.2795715332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FTADVRSVL_	ENSG00000175826|ENST00000574322|CTDNEP1;ENST00000570484.1_1_17:7147506-7148078:-|nuORF	54.722347961057174	0.257609425301511	6				NaN	NaN	0	NaN	12540	4043	16584
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16586	41.663	NaN	2917.7	30	0	546.38	0.106			+	9666	ELTLLIRN	8	60	486.2974128536166	970.5802727740332	2	486.2975158691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ELTLLIRN_	REV__ENSG00000101890|ENST00000218006|GUCY2F;REV__GUCY2F|p.V883Pfs*16|1|0.02|ENSG00000101890|chrX:109392043-109392046|GACC/-|frameshift_variant	53.351449002276354	0.5676011784961348	6				NaN	NaN	0	NaN	12541	4043	16584
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16587	41.665	NaN	4622.2	30	0	456.05	0.106	+			661	AEAESMYQI	9	67	521.2311763473765	1040.447799761553	2	521.2321166992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEAESMYQI_	CON__H-INV:HIT000292931;CON__P05787;CON__Q9H552;ENSG00000170421|ENST00000692008|KRT8;ENST00000409686.2_1_9:102067468-102068890:+|nuORF;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;ENST00000547031.5_1_12:53292389-53294972:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	75.04331003522576	0.118981335847003	6				NaN	NaN	0	NaN	12542	4043	16584
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16588	41.667	NaN	4141.4	30	0	683.99	0.106	+			15344	GTVLFEIAK	9	59	489.28653264174125	976.5585123502825	2	489.286865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTVLFEIAK_	ENSG00000175970|ENST00000344651|UNC119B	80.45461616416974	0.09558281504443908	6				NaN	NaN	0	NaN	12543	4043	16584
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16589	41.669	NaN	1780.5	30	0	164.29	0.034	+			23482	LAFGGKMVM	9	58	477.25032411994204	952.4860953066841	2	477.2507019042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LAFGGKMVM_	ENST00000361763.8_1_11:118175656-118183365:+|nuORF	47.91560031466742	0.327412564698279	6				NaN	NaN	0	NaN	12544	4043	16584
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16590	41.669	NaN	1650.5	30	0	153.41	0.141			+	7979	DSTWLESIY	9	68	557.2582397460938	NaN	0	557.2582397460938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DSTWLESIY_	REV__ENSG00000174125|ENST00000308979|TLR1;REV__TLR1|p.K70Nfs*2|1|0.37|ENSG00000174125|chr4:38798622-38798622|T/-|frameshift_variant	65.80317337860623	0.12456833308499304	6				NaN	NaN	0	NaN	12545	4043	16584
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16603	41.699	NaN	13973	30	0	1391.3	0.214	+			42131	SYLTSASSL	9	63	464.7339548255813	927.4533567179626	2	464.7342834472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SYLTSASSL_	ENSG00000104517|ENST00000520539|UBR5;nc|ENSG00000104517|O95071-2|UBR5;UBR5|p.E2121Kfs*28|1|0.39|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant;UBR5|p.E2121Rfs*13|1|0.28|ENSG00000104517|chr8:102277120-102277121|-/T|frameshift_variant;UBR5|p.F2571Lfs*4|2|0.31|ENSG00000104517|chr8:102262044-102262044|A/-|frameshift_variant;UBR5|p.K2120Rfs*13|1|0.24|ENSG00000104517|chr8:102277121-102277122|TT/-|frameshift_variant	147.69337715509954	0.007406765731929437	6				NaN	NaN	0	NaN	12555	4046	16602
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16604	41.702	NaN	5402.4	30	0	435.19	0.106				-1	 	0	74	600.2889250623906	1198.5632971915811	2	600.2905883789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12556	4046	16602
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16605	41.704	NaN	3959.4	30	0	940.72	0.106				-1	 	0	64	494.79411094402957	987.5736689548592	2	494.7946472167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12557	4046	16602
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16606	41.706	NaN	2097.6	30	0	217.46	0.106	+			42084	SYFSGSHMF	9	62	531.7204761979586	1061.4263994627172	2	531.7215576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SYFSGSHMF_	ENSG00000135083|ENST00000257536|CCNJL;ENST00000377503.6_1_5:159680387-159681146:-|nuORF;nc|ENSG00000135083|Q8IV13|CCNJL	79.45101966838831	0.09992237243120712	6				NaN	NaN	0	NaN	12558	4046	16602
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16607	41.708	NaN	1449.9	30	0	106.83	0.036			+	20549	KFNNARHSL	9	62	543.7948277814294	NaN	0	543.7958374023438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KFNNARHSL_	REV__ENSG00000162426|ENST00000471889|SLC45A1;REV__SLC45A1|p.Q81Rfs*28|1|0.25|ENSG00000162426|chr1:8324566-8324566|C/-|frameshift_variant;REV__SLC45A1|p.R37Q|1|0.19|ENSG00000162426|chr1:8324439-8324439|G/A|missense_variant	39.252832667884924	0.27938773122138094	6				NaN	NaN	0	NaN	12559	4046	16602
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16621	41.738	NaN	1960.2	30	0	74.389	0.144			+	45292	TVRQARSAY	9	68	526.2842407226562	NaN	0	526.2842407226562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVRQARSAY_	REV__ENSG00000136883|ENST00000640217|KIF12;REV__ENST00000473174.1_2_9:116856172-116859990:-|nuORF;REV__nc|ENSG00000136883|Q96FN5|KIF12	42.396135135203025	0.2590952873412954	6				NaN	NaN	0	NaN	12570	4049	16620
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16632	41.766	NaN	2214.7	30	0	213.59	0.214			+	590	ADLHVLSL	8	52	434.25134251356667	NaN	0	434.25128173828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ADLHVLSL_	REV__ENSG00000168427|ENST00000409223|KLHL30	60.29395666154354	1.7418937515398478	6				NaN	NaN	0	NaN	12578	4052	16631
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16633	41.769	NaN	2651.5	30	0	399.71	0.035	+			13722	GPYGGGGQYF	10	63	501.7185842248889	1001.4226155165778	2	501.7191467285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GPYGGGGQYF_	chr12:54282662-54282800|482|460.96|0.0|25.46|+|ENST00000677249|HNRNPA1,HNRNPA1;ENSG00000135486|ENST00000340913|HNRNPA1;ENSG00000139675|ENST00000357495|HNRNPA1L2;ENST00000424115.1_1_3:39377022-39377364:+|nuORF;ENST00000429216.1_1_2:201928351-201928714:+|nuORF;ENST00000452680.3_1_1:116399593-116399968:-|nuORF;nc|ENSG00000135486|P09651-2|HNRNPA1;nc|ENSG00000135486|P09651-3|HNRNPA1	47.91560031466742	0.4762067885998563	6				NaN	NaN	0	NaN	12579	4052	16631
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16646	41.797	NaN	5295.6	30	0	496.32	0.214	+			36274	SENVLQVHL	9	74	519.7820905612181	1037.549628189236	2	519.7828369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SENVLQVHL_	ENSG00000115947|ENST00000392857|ORC4;ENST00000495601.1_1_2:148716324-148733527:-|nuORF;ENST00000496670.6_1_2:148709144-148730385:-|nuORF;nc|ENSG00000115947|O43929-2|ORC4;nc|ENSG00000115947|O43929-3|ORC4	112.41091882917199	0.026537921851008135	6				NaN	NaN	0	NaN	12589	4055	16645
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16647	41.801	NaN	2396.5	30	0	268.56	0.106	+			35732	SDQFPLPLK	9	65	522.7890657965937	1043.5635786599873	2	522.7898559570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SDQFPLPLK_	ENSG00000083312|ENST00000337273|TNPO1;nc|ENSG00000083312|Q92973-2|TNPO1;nc|ENSG00000083312|Q92973-3|TNPO1;TNPO1|p.R891C|2|0.35|ENSG00000083312|chr5:72905384-72905384|C/T|missense_variant	42.86426827375447	0.38666266728046506	6				NaN	NaN	0	NaN	12590	4055	16645
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16648	41.803	NaN	1832.5	30	0	103.85	0.106	+			26977	LYLGDSRR	8	60	490.26822536046876	978.5218977877375	2	490.2687683105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LYLGDSRR_	ENST00000509943.1_1_17:48286340-48286481:+|nuORF	63.30626980617807	0.4690498839812213	6				NaN	NaN	0	NaN	12591	4055	16645
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16649	41.805	NaN	1053.8	30	0	119.4	0.106			+	29495	PCWSDPFPVL	10	55	580.7750854492188	NaN	0	580.7750854492188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PCWSDPFPVL_	REV__ENST00000368408.3_1_1:155059141-155059444:+|nuORF	40.5726180659479	0.36520375954238715	6				NaN	NaN	0	NaN	12592	4055	16645
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16650	41.806	NaN	2074.4	30	0	120.47	0.106				-1	MQQAGMALY	9	68	514.7295080572773	1027.4444631813544	2	514.7301025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_M(Oxidation (M))QQAGMALY_	ENSG00000111300|ENST00000261745|NAA25;ENST00000552527.5_1_12:112478245-112546577:-|nuORF;NAA25|p.E958Sfs*3|1|0.51|ENSG00000111300|chr12:112029578-112029578|C/-|frameshift_variant;NAA25|p.K130N|1|0.05|ENSG00000111300|chr12:112087695-112087695|C/A|missense_variant;NAA25|p.N146Ifs*8|1|0.49|ENSG00000111300|chr12:112081100-112081100|T/-|frameshift_variant;NAA25|p.V720Gfs*6|1|0.14|ENSG00000111300|chr12:112043716-112043717|-/C|frameshift_variant;nc|ENSG00000111300|Q14CX7-2|NAA25	42.47446043378293	0.39123495718708534	6				NaN	NaN	0	NaN	12593	4055	16645
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16651	41.808	NaN	2030.8	30	0	166.31	0.036	+			37476	SLKKSHSTY	9	66	525.7854194514725	NaN	0	525.7830810546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLKKSHSTY_	ENSG00000151025|ENST00000376351|GPR158;ENST00000490549.1_1_10:25883203-25888200:+|nuORF;GPR158|p.A1124Lfs*2|1|0.07|ENSG00000151025|chr10:25598987-25598987|C/-|frameshift_variant;GPR158|p.K1143Rfs*23|1|0.32|ENSG00000151025|chr10:25599048-25599048|A/-|frameshift_variant	44.116797842482775	0.2472372736944149	6				NaN	NaN	0	NaN	12594	4055	16645
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16652	41.809	NaN	1917.4	30	0	131.18	0.141			+	20731	KGTGTAGLIVV	11	64	508.310152434391	1014.605751935582	2	508.81475830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KGTGTAGLIVV_	REV__ENSG00000043514|ENST00000316891|TRIT1;REV__ENST00000491865.5_1_1:40312957-40349130:-|nuORF;REV__nc|ENSG00000043514|Q9H3H1-4|TRIT1;REV__nc|ENSG00000043514|Q9H3H1-5|TRIT1;REV__TRIT1|p.L334*|1|0.3|ENSG00000043514|chr1:39847225-39847225|A/-|frameshift_variant	35.17822180527639	0.6208003396870814	6				NaN	NaN	0	NaN	12595	4055	16645
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16664	41.836	NaN	15080	30	0	1594.5	0.214			+	-1	HQQKMEIY	8	85	546.7612706186906	1091.507988304181	2	546.7625122070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_HQQKM(Oxidation (M))EIY_	REV__ENSG00000113318|ENST00000265081|MSH3;REV__MSH3|p.N1020Ifs*40|1|0.46|ENSG00000113318|chr5:80864865-80864865|A/-|frameshift_variant;REV__MSH3|p.N1020Kfs*17|1|0.43|ENSG00000113318|chr5:80864864-80864865|-/A|frameshift_variant;REV__MSH3|p.N861Mfs*6|1|0.43|ENSG00000113318|chr5:80792766-80792766|A/-|frameshift_variant;REV__MSH3|p.V745Ifs*28|1|0.05|ENSG00000113318|chr5:80768981-80768982|-/CATATTCGAAGTTTAT|frameshift_variant	63.30626980617807	0.4690498839812213	6				NaN	NaN	0	NaN	12604	4058	16663
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16665	41.84	NaN	3991.7	30	0	490.39	0.106	+			38313	SRDEGSSVRL	10	67	553.2853570710386	1104.556161208877	2	553.2863159179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SRDEGSSVRL_	ENSG00000119698|ENST00000304338|PPP4R4	79.48907831485694	0.19979514868675113	6				NaN	NaN	0	NaN	12605	4058	16663
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16666	41.842	NaN	1726.8	30	0	145.19	0.106	+			41775	SVSPFLLGR	9	61	488.28465928806116	NaN	0	488.2843322753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVSPFLLGR_	ENSG00000198700|ENST00000361565|IPO9	40.77816245573522	0.2702456086868081	6				NaN	NaN	0	NaN	12606	4058	16663
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16667	41.844	NaN	1507.6	30	0	219.6	0.033				-1	 	0	51	425.73649993443246	849.4584469356649	2	425.7371520996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12607	4058	16663
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16679	41.87	NaN	1084.2	30	0	71.962	0.214				-1	 	0	40	347.1982823180995	692.382011702999	2	347.19873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12616	4061	16678
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16680	41.873	NaN	1825.8	30	0	320.44	0.035	+			17072	HRHFVKAL	8	63	504.2982658210215	NaN	0	504.2982482910156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HRHFVKAL_	ENST00000427137.1_1_7:46039264-46039813:-|nuORF	35.200714571348534	1.7418937515398478	6				NaN	NaN	0	NaN	12617	4061	16678
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16692	41.899	NaN	14337	30	0	1132.5	0.215			+	-1	HQQKMEIY	8	79	546.7612706186906	1091.507988304181	2	546.7628784179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_HQQKM(Oxidation (M))EIY_	REV__ENSG00000113318|ENST00000265081|MSH3;REV__MSH3|p.N1020Ifs*40|1|0.46|ENSG00000113318|chr5:80864865-80864865|A/-|frameshift_variant;REV__MSH3|p.N1020Kfs*17|1|0.43|ENSG00000113318|chr5:80864864-80864865|-/A|frameshift_variant;REV__MSH3|p.N861Mfs*6|1|0.43|ENSG00000113318|chr5:80792766-80792766|A/-|frameshift_variant;REV__MSH3|p.V745Ifs*28|1|0.05|ENSG00000113318|chr5:80768981-80768982|-/CATATTCGAAGTTTAT|frameshift_variant	44.116797842482775	0.6307669463330267	6				NaN	NaN	0	NaN	12626	4064	16691
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16693	41.903	NaN	3038.7	30	0	200.58	0.106				-1	 	0	62	369.21164815012617	736.4087433670524	2	369.2119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12627	4064	16691
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16694	41.905	NaN	2977.3	30	0	374.14	0.106	+			14804	GTLEQWIEK	9	65	552.2894181926172	1102.5642834520343	2	552.2906494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTLEQWIEK_	ENSG00000055332|ENST00000233057|EIF2AK2;nc|ENSG00000055332|P19525-2|EIF2AK2	120.30596017624542	0.02101454110788768	6				NaN	NaN	0	NaN	12628	4064	16691
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16695	41.907	NaN	4934.4	30	0	843.32	0.106	+			40909	SVFQETLLH	9	72	537.2848961683587	1072.5552394035174	2	537.2865600585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVFQETLLH_	ENST00000602661.5_1_9:108363519-108366511:+|nuORF	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	12629	4064	16691
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16696	41.909	NaN	3574.2	30	0	312.28	0.106	+			9753	ENFRNLLL	8	61	509.78950289510607	NaN	0	509.78948974609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ENFRNLLL_	ENSG00000062370|ENST00000354340|ZNF112;nc|ENSG00000062370|Q9UJU3|ZNF112	34.172542307311794	1.7418937515398478	6				NaN	NaN	0	NaN	12630	4064	16691
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16697	41.91	NaN	2407.4	30	0	292.19	0.035	+			47384	VPIPTVNQY	9	62	515.7818957503039	1029.5492385674077	2	515.7821044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VPIPTVNQY_	ENSG00000057252|ENST00000367619|SOAT1;nc|ENSG00000057252|P35610-2|SOAT1;nc|ENSG00000057252|P35610-3|SOAT1	31.529811441608018	0.5085848003137583	6				NaN	NaN	0	NaN	12631	4064	16691
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16698	41.911	NaN	3106.3	30	0	208.08	0.14	+			29221	NVVQAVEQY	9	64	525.2659988923581	1048.517444851516	2	525.267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NVVQAVEQY_	AKAP11|p.F1607Sfs*48|1|0.11|ENSG00000023516|chr13:42303562-42303562|T/-|frameshift_variant;AKAP11|p.H1753Ifs*3|1|0.11|ENSG00000023516|chr13:42308589-42308589|T/-|frameshift_variant;ENSG00000023516|ENST00000025301|AKAP11	54.776311868738084	0.25715957988447635	6				NaN	NaN	0	NaN	12632	4064	16691
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16707	41.933	NaN	1751.2	30	0	287.34	0.214			+	-1	LCITPVMLSL	10	61	573.8153714516536	1145.6161899701071	2	573.8167114257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_LC(Carbamidomethyl (C))ITPVMLSL_	REV__sp|F5H9N9|US17_HCMVMProteinUS17OS=Humancytomegalovirus(strainMerlin)OX=295027GN=US17PE=4SV=1;REV__sp|P09716|US17_HCMVAUncharacterizedproteinHVLF1OS=Humancytomegalovirus(strainAD169)OX=10360GN=US17PE=3SV=1	27.882242232435846	0.6521336255503853	6				NaN	NaN	0	NaN	12638	4067	16706
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16708	41.937	NaN	2770.5	30	0	1035.1	0.032	+			31868	QPVSGLPI	8	40	405.73967240344246	809.4647918736849	2	405.7394104003906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QPVSGLPI_	ENSG00000153930|ENST00000682825|ANKFN1	53.351449002276354	0.5676011784961348	6				NaN	NaN	0	NaN	12639	4067	16706
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16720	41.963	NaN	5558.6	30	0	2929.6	0.214	+			11610	FPSSVTNTL	9	59	483.2496526639872	964.4847523947744	2	483.25018310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FPSSVTNTL_	ENSG00000145113|ENST00000463781|MUC4;MUC4|p.L3985Ffs*274|1|0.3|ENSG00000145113|chr3:195779627-195779627|G/-|frameshift_variant;MUC4|p.N4902Tfs*8|1|0.37|ENSG00000145113|chr3:195761027-195761027|T/-|frameshift_variant;nc|ENSG00000145113|Q99102-10|MUC4;nc|ENSG00000145113|Q99102-11|MUC4;nc|ENSG00000145113|Q99102-15|MUC4;nc|ENSG00000145113|Q99102-16|MUC4;nc|ENSG00000145113|Q99102-17|MUC4;nc|ENSG00000145113|Q99102-2|MUC4;nc|ENSG00000145113|Q99102-3|MUC4;nc|ENSG00000145113|Q99102-5|MUC4;nc|ENSG00000145113|Q99102-7|MUC4;nc|ENSG00000145113|Q99102-8|MUC4;nc|ENSG00000145113|Q99102-9|MUC4	71.87747018426188	0.13267044672804276	6				NaN	NaN	0	NaN	12648	4070	16719
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16721	41.967	NaN	3882.8	30	0	285.22	0.106	+			18184	ILYHYPEL	8	68	524.2792887758125	1046.5440246184248	2	524.2788696289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ILYHYPEL_	ENSG00000123472|ENST00000574428|ATPAF1;nc|ENSG00000123472|Q5TC12-2|ATPAF1;nc|ENSG00000123472|Q5TC12-3|ATPAF1	54.76467175910256	0.5536104764165384	6				NaN	NaN	0	NaN	12649	4070	16719
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16722	41.969	NaN	1400.5	30	0	176.38	0.106	+			11064	FESGISQAL	9	49	476.2417412537247	950.4689295742494	2	476.2419738769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FESGISQAL_	ENSG00000171863|ENST00000645674|RPS7;ENST00000479123.1_1_2:3623223-3624265:+|nuORF	29.170058357718403	0.5306379469863586	6				NaN	NaN	0	NaN	12650	4070	16719
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16723	41.97	NaN	2993.4	30	0	282.54	0.106			+	-1	QLCDLLKF	8	61	518.7786849676272	NaN	0	518.7789306640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_QLC(Carbamidomethyl (C))DLLKF_	REV__ARFGEF2|p.H1610Y|1|0.35|ENSG00000124198|chr20:49025385-49025385|C/T|missense_variant;REV__ENSG00000124198|ENST00000371917|ARFGEF2	51.33545320467046	1.7418937515398478	6				NaN	NaN	0	NaN	12651	4070	16719
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16724	41.972	NaN	1259.6	30	0	220.6	0.106	+			19062	IYGSSHSW	8	51	468.7135565022201	935.4125600712403	2	468.7142028808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IYGSSHSW_	DUOX1|p.S186N|1|0.29|ENSG00000137857|chr15:45135535-45135535|G/A|missense_variant;ENSG00000137857|ENST00000389037|DUOX1;ENSG00000140279|ENST00000389039|DUOX2;nc|ENSG00000140279|Q9NRD8|DUOX2	54.76467175910256	0.5536104764165384	6				NaN	NaN	0	NaN	12652	4070	16719
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16725	41.974	NaN	1601.5	30	0	376.56	0.036				-1	MWLETFLC	8	66	558.2493625454459	NaN	0	558.2486572265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))WLETFLC(Carbamidomethyl (C))_	ENST00000466490.6_1_3:133538637-133538781:+|nuORF	26.79610172149135	1.7418937515398478	6				NaN	NaN	0	NaN	12653	4070	16719
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16739	42.005	NaN	6078	30	0	466.37	0.214	+			49701	VYKVVGNLL	9	67	502.81001997694847	1003.605487020697	2	502.8103942871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYKVVGNLL_	ENSG00000183856|ENST00000361170|IQGAP3;IQGAP3|p.Q1205Sfs*31|1|0.4|ENSG00000183856|chr1:156534628-156534628|G/-|frameshift_variant	108.08749611321984	0.03094949498378333	6				NaN	NaN	0	NaN	12664	4073	16738
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16740	42.008	NaN	7061.6	30	0	2543.5	0.106	+			32629	QYSQHISLF	9	75	561.7820335882343	1121.5495142432685	2	561.782958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QYSQHISLF_	ENSG00000163072|ENST00000317647|NOSTRIN;ENST00000486873.2_1_2:169699570-169711975:+|nuORF;nc|ENSG00000163072|Q8IVI9-2|NOSTRIN;nc|ENSG00000163072|Q8IVI9-3|NOSTRIN;nc|ENSG00000163072|Q8IVI9-4|NOSTRIN;NOSTRIN|p.K461Rfs*5|1|0.24|ENSG00000163072|chr2:168862044-168862044|A/-|frameshift_variant;NOSTRIN|p.L407*|1|0.21|ENSG00000163072|chr2:168860830-168860830|T/-|frameshift_variant	109.47833844074708	0.029530294723441826	6				NaN	NaN	0	NaN	12665	4073	16738
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16741	42.01	NaN	4664.8	30	0	739.73	0.106	+			30581	QANYTIQSL	9	62	519.265993592884	1036.517434252568	2	519.2665405273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QANYTIQSL_	ENSG00000086065|ENST00000223500|CHMP5;nc|ENSG00000086065|Q9NZZ3-2|CHMP5	68.84614121027924	0.14577793175421136	6				NaN	NaN	0	NaN	12666	4073	16738
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16742	42.012	NaN	4256	30	0	889.21	0.106	+			45499	TYDYNFHSF	9	68	597.2475552672681	1192.4805576013362	2	597.2488403320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TYDYNFHSF_	ASH1L|p.K2377Nfs*5|1|0.28|ENSG00000116539|chr1:155354570-155354570|T/-|frameshift_variant;ASH1L|p.S2309Ifs*11|1|0.64|ENSG00000116539|chr1:155357635-155357636|-/T|frameshift_variant;ENSG00000116539|ENST00000392403|ASH1L;nc|ENSG00000116539|Q9NR48|ASH1L	138.06239232086	0.011389075116295402	6				NaN	NaN	0	NaN	12667	4073	16738
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16743	42.014	NaN	2244.1	30	0	157.12	0.106			+	11579	FPNPSSSLV	9	56	474.2446056409268	946.4746583486536	2	474.24481201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FPNPSSSLV_	REV__ENSG00000278129|ENST00000621650|ZNF8	66.42927471994793	0.16001998865088202	6				NaN	NaN	0	NaN	12668	4073	16738
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16744	42.016	NaN	2765.6	30	0	320.02	0.034			+	17723	IENILKIV	8	58	471.305022462692	NaN	0	471.3050842285156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IENILKIV_	REV__ENSG00000188738|ENST00000424728|FSIP2;REV__FSIP2|p.D5579Mfs*10|1|0.09|ENSG00000188738|chr2:185806029-185806029|A/-|frameshift_variant;REV__FSIP2|p.K6152Rfs*27|1|0.43|ENSG00000188738|chr2:185807758-185807758|A/-|frameshift_variant;REV__FSIP2|p.K6528Nfs*5|1|0.33|ENSG00000188738|chr2:185808884-185808884|A/-|frameshift_variant;REV__FSIP2|p.V5734Yfs*24|2|0.23|ENSG00000188738|chr2:185806499-185806499|A/-|frameshift_variant;REV__FSIP2|p.V6322*|1|0.42|ENSG00000188738|chr2:185808265-185808265|A/-|frameshift_variant	79.9392285194092	1.7418937515398478	6				NaN	NaN	0	NaN	12669	4073	16738
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16745	42.016	NaN	3630.7	30	0	256.74	0.141	+			21739	KQLVHIQPF	9	69	555.3266863671034	1108.6388198010068	2	555.3277587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KQLVHIQPF_	EPC1|p.I101V|1|0.17|ENSG00000120616|chr10:32305784-32305784|T/C|missense_variant	45.9519527083369	0.35044536499095585	6				NaN	NaN	0	NaN	12670	4073	16738
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16758	42.046	NaN	4617.8	30	0	439.57	0.214				-1	 	0	74	600.2889250623906	1198.5632971915811	2	600.2904663085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12680	4076	16757
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16759	42.05	NaN	4883.2	30	0	414.25	0.106	+			49579	VYENVSHFL	9	74	554.2764785178026	1106.5384041024051	2	554.277587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYENVSHFL_	ENSG00000164933|ENST00000297578|SLC25A32	129.42129120953632	0.01549634589885217	6				NaN	NaN	0	NaN	12681	4076	16757
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16760	42.052	NaN	2880.3	30	0	353.76	0.106	+			11519	FPDWREDVL	9	70	588.7897205162348	1175.5648880992694	2	588.7913818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FPDWREDVL_	ENSG00000075539|ENST00000358350|FRYL;FRYL|p.K2264Qfs*11|1|0.13|ENSG00000075539|chr4:48531269-48531270|-/G|frameshift_variant;FRYL|p.P2464Efs*13|1|0.04|ENSG00000075539|chr4:48523032-48523033|-/TATACAATTC|frameshift_variant	42.86426827375447	0.38666266728046506	6				NaN	NaN	0	NaN	12682	4076	16757
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16761	42.054	NaN	1691.1	30	0	295.93	0.106			+	8215	EAEEIIAEHHQ	11	52	653.3068003033395	1304.599047673479	2	653.3059692382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EAEEIIAEHHQ_	REV__ENSG00000103021|ENST00000219299|CCDC113	31.634271133179894	0.6579734920221648	6				NaN	NaN	0	NaN	12683	4076	16757
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16762	42.056	NaN	3092	30	0	581.33	0.106	+			6705	AYVPGFAHI	9	59	487.758282235041	973.502011536882	2	487.7584228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AYVPGFAHI_	ENSG00000107874|ENST00000369937|CUEDC2;ENST00000477994.1_1_10:104183924-104192326:-|nuORF	49.21078951299608	0.3122205139198386	6				NaN	NaN	0	NaN	12684	4076	16757
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16763	42.057	NaN	2029.2	30	0	227.08	0.036				-1	RCISIFLW	8	58	547.7948712092385	1093.575189485277	2	548.7940063476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_RC(Carbamidomethyl (C))ISIFLW_	SLC16A12|p.F73Lfs*22|2|0.28|ENSG00000152779|chr10:89443841-89443841|A/-|frameshift_variant	25.450171626174864	0.7628259754767981	6				NaN	NaN	0	NaN	12685	4076	16757
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16764	42.058	NaN	2055.8	30	0	143.42	0.14	+			37477	SLKKSHSTY	9	65	525.7854194514725	NaN	0	525.7814331054688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SLKKSHSTY_	ENSG00000151025|ENST00000376351|GPR158;ENST00000490549.1_1_10:25883203-25888200:+|nuORF;GPR158|p.A1124Lfs*2|1|0.07|ENSG00000151025|chr10:25598987-25598987|C/-|frameshift_variant;GPR158|p.K1143Rfs*23|1|0.32|ENSG00000151025|chr10:25599048-25599048|A/-|frameshift_variant	37.81151784470057	0.28666463014928195	6				NaN	NaN	0	NaN	12686	4076	16757
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16776	42.086	NaN	3097.8	30	0	838.59	0.214	+			47336	VPDLVHVM	8	62	455.245705087874	908.476857242548	2	455.2462158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VPDLVHVM_	ENSG00000100614|ENST00000395076|PPM1A;nc|ENSG00000100614|P35813-3|PPM1A;PPM1A|p.R335H|1|0.37|ENSG00000100614|chr14:60289857-60289857|G/A|missense_variant	86.93460362436232	0.2867499496721195	6				NaN	NaN	0	NaN	12695	4079	16775
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16777	42.09	NaN	1707.8	30	0	154.02	0.034	+			46019	VAVPYPPTV	9	56	471.76872499197117	NaN	0	471.7691650390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VAVPYPPTV_	MED13L|p.A850V|1|0.17|ENSG00000123066|chr12:116003023-116003023|G/A|missense_variant	40.5726180659479	0.27166212580479165	6				NaN	NaN	0	NaN	12696	4079	16775
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16789	42.116	NaN	5943.2	30	0	454.8	0.214			+	8619	ECVQHVYSVI	10	78	588.7897205162348	1175.5648880992694	2	589.2894897460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ECVQHVYSVI_	REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-10|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-13|TTN;REV__nc|ENSG00000155657|Q8WZ42-2|TTN;REV__nc|ENSG00000155657|Q8WZ42-3|TTN;REV__nc|ENSG00000155657|Q8WZ42-4|TTN;REV__nc|ENSG00000155657|Q8WZ42-5|TTN;REV__nc|ENSG00000155657|Q8WZ42-7|TTN;REV__nc|ENSG00000155657|Q8WZ42-8|TTN;REV__nc|ENSG00000155657|Q8WZ42-9|TTN;REV__nc|ENSG00000155657|Q8WZ42|TTN;REV__TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;REV__TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;REV__TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant	74.1650062923329	0.2432923583094885	6				NaN	NaN	0	NaN	12705	4082	16788
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16790	42.119	NaN	2698.8	30	0	253.97	0.106	+			11089	FEWENKVTV	9	68	576.2892996144145	1150.564046295629	2	576.2905883789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FEWENKVTV_	ENSG00000129083|ENST00000439561|COPB1;ENST00000526527.1_1_11:14481741-14482839:-|nuORF	49.536043120802724	0.308405419312776	6				NaN	NaN	0	NaN	12706	4082	16788
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16791	42.121	NaN	4096.4	30	0	506.94	0.106	+			35202	SAIVEIFSK	9	69	497.28381126501824	992.5530695968365	2	497.28387451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAIVEIFSK_	ENSG00000050405|ENST00000341247|LIMA1;LIMA1|p.T536Lfs*38|2|0.4|ENSG00000050405|chr12:50177739-50177739|G/-|frameshift_variant;nc|ENSG00000050405|Q9UHB6-4|LIMA1	59.93077597824379	0.21419174904018318	6				NaN	NaN	0	NaN	12707	4082	16788
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16792	42.123	NaN	2075.9	30	0	190.62	0.106			+	-1	FTAYICLPI	9	63	549.2887753635379	NaN	0	549.2879028320312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_FTAYIC(Carbamidomethyl (C))LPI_	REV__L1PB4_dup3416|chr8:37568340-37568872:-|1.5609702491558273|0.0696235306653889|4.49|476.0|32|2|anti-sense	33.51558372728122	0.30835390848773375	6				NaN	NaN	0	NaN	12708	4082	16788
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16793	42.125	NaN	2091.2	30	0	228.8	0.106			+	17260	HYLAMPDIGG	10	70	537.258885283903	NaN	0	537.25927734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HYLAMPDIGG_	REV__tr|U7SIX5|U7SIX5_FUSNUTranscriptionterminationfactorRhoOS=FusobacteriumnucleatumCTI-5OX=1316586GN=rhoPE=3SV=1	55.50420428727701	0.270804100254592	6				NaN	NaN	0	NaN	12709	4082	16788
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16794	42.127	NaN	974.19	30	0	147.75	0.106				-1	VCIHCMNE	8	44	322.12732954319097	NaN	0	322.1275329589844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_VCIHCM(Oxidation (M))NE_	ENSG00000100426|ENST00000216268|ZBED4;ZBED4|p.I658Sfs*5|1|0.49|ENSG00000100426|chr22:49885628-49885628|A/-|frameshift_variant;ZBED4|p.R315W|1|0.36|ENSG00000100426|chr22:49884605-49884605|C/T|missense_variant	21.9598887501803	1.7418937515398478	6				NaN	NaN	0	NaN	12710	4082	16788
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16795	42.129	NaN	3138.6	30	0	199.58	0.037			+	-1	VLGYIAIIGAM	11	74	568.8209083680342	1135.6272638028684	2	568.8235473632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_VLGYIAIIGAM(Oxidation (M))_	REV__ENSG00000185883|ENST00000330398|ATP6V0C	83.28718786952967	0.12625498334152963	6				NaN	NaN	0	NaN	12711	4082	16788
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16806	42.152	NaN	9506	30	0	1417.4	0.214	+			14936	GTMEWIMIK	9	74	562.7769590649568	1123.5393651967136	2	562.7786254882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_GTM(Oxidation (M))EWIMIK_	ENSG00000168273|ENST00000477703|UQCC5	131.03138772384656	0.014687601201650916	6				NaN	NaN	0	NaN	12719	4085	16805
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16807	42.156	NaN	4610.6	30	0	985.15	0.106	+			18255	IPDDLKQLY	9	71	552.7993160989397	1103.5840792646793	2	552.801025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IPDDLKQLY_	ENSG00000167325|ENST00000300738|RRM1	85.16082228582465	0.07850854922700509	6				NaN	NaN	0	NaN	12720	4085	16805
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16808	42.158	NaN	1579.3	30	0	174.13	0.106	+			2331	AMMAIAIMK	9	53	490.2600369407181	978.5055209482363	2	490.26055908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AMMAIAIMK_	ENSG00000227500|ENST00000316097|SCAMP4;ENST00000472442.2_1_19:1922970-1924280:+|nuORF;nc|ENSG00000227500|Q969E2-2|SCAMP4	33.51558372728122	0.4900267029546261	6				NaN	NaN	0	NaN	12721	4085	16805
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16809	42.16	NaN	647.01	30	0	87.522	0.106				-1	 	0	28	322.6254301384472	643.2363073436944	2	322.6269836425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12722	4085	16805
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16810	42.161	NaN	3747.3	30	0	393.94	0.106	+			35670	SDFAITRF	8	61	478.7459752000784	955.4773974669569	2	478.74664306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SDFAITRF_	ENSG00000118322|ENST00000327245|ATP10B	51.19269402634007	0.5868595481438337	6				NaN	NaN	0	NaN	12723	4085	16805
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16811	42.163	NaN	2482.6	30	0	290.53	0.036			+	45448	TWFLGGPWL	9	61	538.7816324348817	NaN	0	538.780029296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TWFLGGPWL_	REV__ENSG00000068878|ENST00000404125|PSME4;REV__PSME4|p.K328Nfs*3|1|0.23|ENSG00000068878|chr2:53932734-53932734|T/-|frameshift_variant;REV__PSME4|p.K933Nfs*8|1|0.33|ENSG00000068878|chr2:53906854-53906854|T/-|frameshift_variant;REV__PSME4|p.V1190Cfs*2|1|0.15|ENSG00000068878|chr2:53897908-53897909|-/A|frameshift_variant	27.882242232435846	0.3367954786602879	6				NaN	NaN	0	NaN	12724	4085	16805
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16812	42.164	NaN	1620.4	30	0	78.023	0.141				-1	MAVSRHLTR	9	60	543.794854489462	1085.5751560457238	2	543.7974853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_M(Oxidation (M))AVSRHLTR_	BRF1|p.G342Afs*36|2|0.16|ENSG00000185024|chr14:105226092-105226092|C/-|frameshift_variant;BRF1|p.K313Nfs*20|1|0.27|ENSG00000185024|chr14:105226267-105226267|T/-|frameshift_variant;BRF1|p.L314Tfs*5|1|0.37|ENSG00000185024|chr14:105226266-105226267|-/T|frameshift_variant;BRF1|p.S293Lfs*15|1|0.38|ENSG00000185024|chr14:105226672-105226673|-/G|frameshift_variant;ENSG00000185024|ENST00000547530|BRF1;nc|ENSG00000185024|Q92994-4|BRF1;nc|ENSG00000185024|Q92994-5|BRF1;nc|ENSG00000185024|Q92994-6|BRF1;nc|ENSG00000185024|Q92994-7|BRF1;nc|ENSG00000185024|Q92994-8|BRF1	42.396135135203025	0.392153681582562	6				NaN	NaN	0	NaN	12725	4085	16805
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16824	42.191	NaN	4268.4	30	0	293.33	0.214	+			16759	HLVAVFNEY	9	70	546.2802489185403	1090.5459449038806	2	546.2801513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HLVAVFNEY_	ENSG00000122359|ENST00000422982|ANXA11;nc|ENSG00000122359|P50995-2|ANXA11	71.87747018426188	0.13267044672804276	6				NaN	NaN	0	NaN	12734	4088	16823
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16825	42.195	NaN	5293.4	30	0	1170.7	0.106	+			1102	AELGNMQGL	9	66	466.72822991683955	931.4419069004791	2	466.7286071777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AELGNMQGL_	CON__P05787;CON__Q9H552;ENSG00000170421|ENST00000692008|KRT8;ENST00000405771.3_1_6:134619244-134619385:-|nuORF;ENST00000409686.2_1_9:102067468-102068890:+|nuORF;ENST00000414328.2_1_1:157043381-157043870:+|nuORF;ENST00000441609.1_1_6:162989483-162989972:+|nuORF;ENST00000450021.1_1_2:183936291-183936849:-|nuORF;ENST00000550170.5_1_12:53294858-53298765:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	75.04331003522576	0.118981335847003	6				NaN	NaN	0	NaN	12735	4088	16823
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16826	42.197	NaN	2899.7	30	0	281.9	0.106				-1	RSCSKSELI	9	65	540.2786903116297	1078.5428276900593	2	540.2819213867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_RSC(Carbamidomethyl (C))SKSELI_	ENSG00000108395|ENST00000262294|TRIM37;ENST00000582852.1_1_17:57141714-57157166:-|nuORF;nc|ENSG00000108395|O94972-2|TRIM37;nc|ENSG00000108395|O94972-3|TRIM37;TRIM37|p.P935Rfs*15|1|0.29|ENSG00000108395|chr17:59001606-59001606|G/-|frameshift_variant	35.15202426646627	0.4747332964206883	6				NaN	NaN	0	NaN	12736	4088	16823
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16827	42.199	NaN	2032.7	30	0	234.51	0.106			+	50371	WVVDVKIL	8	65	486.3010481557165	NaN	0	486.3009948730469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_WVVDVKIL_	REV__nc|ENSG00000197580|Q9BYV7-4|BCO2	54.776311868738084	1.7418937515398478	6				NaN	NaN	0	NaN	12737	4088	16823
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16828	42.2	NaN	2787.5	30	0	352.5	0.106	+			557	ADFLASVVFA	10	63	520.2774628457082	1038.5403727582163	2	520.7797241210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ADFLASVVFA_	ENSG00000188822|ENST00000374472|CNR2	42.396135135203025	0.5270658956260207	6				NaN	NaN	0	NaN	12738	4088	16823
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16829	42.202	NaN	1869.3	30	0	154.55	0.035			+	-1	VLCVCLLGR	9	64	516.7899628744656	NaN	0	516.7904663085938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_VLCVC(Carbamidomethyl (C))LLGR_	REV__CON__Q0VCM5	33.51558372728122	0.30835390848773375	6				NaN	NaN	0	NaN	12739	4088	16823
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16830	42.203	NaN	1833.2	30	0	185.09	0.14			+	11595	FPRSSLAEI	9	58	510.2792769978451	1018.5440010624902	2	510.2781677246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FPRSSLAEI_	REV__ENSG00000162402|ENST00000294383|USP24;REV__USP24|p.Y1733Tfs*10|1|0.35|ENSG00000162402|chr1:55100913-55100913|A/-|frameshift_variant	51.19269402634007	0.2889735674168909	6				NaN	NaN	0	NaN	12740	4088	16823
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16847	42.24	NaN	4395.1	30	0	244.19	0.214				-1	 	0	65	391.22486075361206	780.4351685740241	2	391.224853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12754	4091	16846
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16848	42.243	NaN	6475.2	30	0	825.59	0.106	+			42181	SYVQVTSNF	9	64	522.7533258265097	1043.4920987198193	2	522.75390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SYVQVTSNF_	ENSG00000072364|ENST00000265343|AFF4	134.7655990226056	0.012935733000282069	6				NaN	NaN	0	NaN	12755	4091	16846
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16849	42.245	NaN	4519.1	30	0	673.72	0.106	+			46943	VIYPARISL	9	55	516.3155318521254	1030.6165107710508	2	516.3164672851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VIYPARISL_	DNAJB1|p.Q328Pfs*8|1|0.26|ENSG00000132002|chr19:14515980-14515981|-/G|frameshift_variant;ENSG00000132002|ENST00000254322|DNAJB1;nc|ENSG00000132002|P25685-2|DNAJB1	49.44154591367651	0.3095138337212152	6				NaN	NaN	0	NaN	12756	4091	16846
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16850	42.247	NaN	852.65	30	0	59.964	0.106				-1	 	0	39	347.1982823180995	692.382011702999	2	347.19866943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12757	4091	16846
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16851	42.249	NaN	2634.3	30	0	456.73	0.106	+			13033	GEVQVWRI	8	58	493.77419950125096	985.533846069302	2	493.7747497558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GEVQVWRI_	ENSG00000127831|ENST00000248444|VIL1	45.97224482568171	0.6192535143389125	6				NaN	NaN	0	NaN	12758	4091	16846
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16852	42.251	NaN	1755.5	30	0	205.6	0.036			+	2288	ALYSRHRF	8	63	525.2872529671489	NaN	0	525.287109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ALYSRHRF_	REV__ENSG00000213799|ENST00000458035|ZNF845;REV__nc|ENSG00000123870|P52743|ZNF137P	44.116797842482775	1.7418937515398478	6				NaN	NaN	0	NaN	12759	4091	16846
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16853	42.251	NaN	896.44	30	0	67.643	0.139			+	2030	AKPQPLASL	9	50	462.77891946723787	NaN	0	462.7790832519531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AKPQPLASL_	REV__ENSG00000142102|ENST00000409548|PGGHG;REV__ENST00000474221.5_1_11:289135-291269:+|nuORF;REV__nc|ENSG00000142102|Q32M88-2|PGGHG	42.396135135203025	0.2590952873412954	6				NaN	NaN	0	NaN	12760	4091	16846
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16864	42.278	NaN	6812.7	30	0	375.8	0.214				-1	 	0	84	369.21164815012617	736.4087433670524	2	369.2119445800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12768	4094	16863
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16865	42.282	NaN	4775	30	0	603.82	0.106	+			29344	NYVANTNVF	9	71	521.2539373007647	1040.4933216683294	2	521.2540283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NYVANTNVF_	ENSG00000124126|ENST00000371941|PREX1;nc|ENSG00000124126|Q8TCU6-2|PREX1;nc|ENSG00000124126|Q8TCU6-3|PREX1	63.53385203322761	0.18415635464017938	6				NaN	NaN	0	NaN	12769	4094	16863
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16866	42.284	NaN	7247.6	30	0	2096.8	0.106	+			45657	TYTVKIVAI	9	77	504.30997207002565	1006.6053912068513	2	504.3103332519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TYTVKIVAI_	DSG2|p.I845*|1|0.27|ENSG00000046604|chr18:31545914-31545914|A/-|frameshift_variant;ENSG00000046604|ENST00000261590|DSG2	36.446750945000026	0.4619375763483977	6				NaN	NaN	0	NaN	12770	4094	16863
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16867	42.286	NaN	3502.8	30	0	421.48	0.106	+			42394	TAIVDKIGF	9	64	482.2786074397035	962.542661946207	2	482.2789611816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TAIVDKIGF_	ENSG00000205339|ENST00000379719|IPO7;IPO7|p.D430Mfs*6|1|0.18|ENSG00000205339|chr11:9425208-9425208|A/-|frameshift_variant;IPO7|p.M511Cfs*3|1|0.19|ENSG00000205339|chr11:9429134-9429134|A/-|frameshift_variant	78.26377905018397	0.10505600812668463	6				NaN	NaN	0	NaN	12771	4094	16863
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16868	42.287	NaN	2251.6	30	0	124.85	0.106	+			25627	LQQGVPETIA	10	65	528.2914066030365	1054.568260272873	2	528.2926025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LQQGVPETIA_	ENSG00000143515|ENST00000368489|ATP8B2;nc|ENSG00000143515|P98198-3|ATP8B2;nc|ENSG00000143515|P98198|ATP8B2	32.81241826257853	0.6118718159329168	6				NaN	NaN	0	NaN	12772	4094	16863
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16869	42.289	NaN	3440.5	30	0	410.81	0.034				-1	 	0	70	485.32018248903273	968.6258120448655	2	485.3204040527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12773	4094	16863
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16870	42.29	NaN	1281.4	30	0	163.66	0.139			+	27451	MLLGATIPV	9	46	457.7718531355103	913.5291533378206	2	457.7728271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MLLGATIPV_	REV__ENST00000222462.2_1_7:120969115-120969268:+|nuORF	31.954861631926434	0.5046124803899898	6				NaN	NaN	0	NaN	12774	4094	16863
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16881	42.317	NaN	3886.1	30	0	542.64	0.214	+			26203	LSSAMANVVF	10	67	519.7675240029163	1037.5204950726325	2	519.7682495117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSSAMANVVF_	ENSG00000133612|ENST00000397238|AGAP3;ENST00000473633.1_1_7:150838782-150841027:+|nuORF;nc|ENSG00000133612|Q96P47-2|AGAP3;nc|ENSG00000133612|Q96P47-5|AGAP3;nc|ENSG00000133612|Q96P47|AGAP3	45.97224482568171	0.49411383603842696	6				NaN	NaN	0	NaN	12782	4097	16880
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16882	42.32	NaN	6075.5	30	0	1137.3	0.106	+			42290	TAEGTVFHF	9	68	504.7421690992153	1007.4697852652306	2	504.7430419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAEGTVFHF_	ENSG00000141076|ENST00000314423|UTP4;nc|ENSG00000141076|Q969X6-2|UTP4;nc|ENSG00000141076|Q969X6-3|UTP4	68.484700416344	0.1473408039581241	6				NaN	NaN	0	NaN	12783	4097	16880
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16883	42.322	NaN	7707.4	30	0	655.97	0.106	+			6577	AYLEAIHNF	9	73	539.2709924324323	1076.5274319316645	2	539.2723388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AYLEAIHNF_	ENSG00000042753|ENST00000263270|AP2S1	104.0567914643314	0.03506238181059741	6				NaN	NaN	0	NaN	12784	4097	16880
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16884	42.324	NaN	3358.2	30	0	404.28	0.106	+			50765	YEKLLWTT	8	67	527.2841894557785	1052.5538259783568	2	527.2847290039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YEKLLWTT_	ENSG00000168036|ENST00000349496|CTNNB1;ENSG00000173801|ENST00000393931|JUP	56.72105179125745	0.5342425954139568	6				NaN	NaN	0	NaN	12785	4097	16880
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16885	42.326	NaN	1798	30	0	137.91	0.106	+			50308	WSSTWKTLS	9	64	548.2760965309311	1094.5376401286621	2	548.2771606445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_WSSTWKTLS_	ENST00000483260.5_1_1:110949739-110950286:-|nuORF	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	12786	4097	16880
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16886	42.328	NaN	1801.5	30	0	225.83	0.106			+	43311	TFVSERVGY	9	66	529.2702272998537	1056.5259016665073	2	529.2723999023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TFVSERVGY_	REV__ENSG00000215021|ENST00000535923|PHB2;REV__ENST00000542294.1_1_12:7079357-7079730:-|nuORF;REV__ENST00000543465.5_1_12:7077022-7079730:-|nuORF;REV__ENST00000544134.5_1_12:7077746-7079730:-|nuORF;REV__ENST00000546217.1_1_12:7079496-7079730:-|nuORF;REV__nc|ENSG00000215021|Q99623-2|PHB2	44.116797842482775	0.37197099687881774	6				NaN	NaN	0	NaN	12787	4097	16880
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16887	42.33	NaN	1159.2	30	0	128.02	0.036				-1	IMGDLMRTM	9	47	558.2493669461194	NaN	0	558.248779296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	3 Oxidation (M)	_IM(Oxidation (M))GDLM(Oxidation (M))RTM(Oxidation (M))_	ENSG00000125450|ENST00000245544|NUP85;ENST00000449421.6_1_17:73205928-73222855:+|nuORF;ENST00000577561.1_1_17:73214398-73221993:+|nuORF;ENST00000581104.5_1_17:73208151-73231006:+|nuORF;ENST00000583948.5_1_17:73201841-73222120:+|nuORF;nc|ENSG00000125450|Q9BW27-2|NUP85;nc|ENSG00000125450|Q9BW27-3|NUP85	35.61828744233558	0.29773779453147337	6				NaN	NaN	0	NaN	12788	4097	16880
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16900	42.357	NaN	2186.9	30	0	291.75	0.214			+	31571	QLQELAQGFD	10	65	574.7839694866577	1147.5533860401154	2	574.7848510742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QLQELAQGFD_	REV__ENSG00000124587|ENST00000304611|PEX6;REV__nc|ENSG00000124587|Q13608-2|PEX6;REV__nc|ENSG00000124587|Q13608-3|PEX6	24.231819034082204	0.6819444564287812	6				NaN	NaN	0	NaN	12798	4100	16899
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16901	42.36	NaN	1688.3	30	0	125.22	0.106			+	6732	CALPAEVRSY	10	65	554.7753188303654	1107.5360847275308	2	554.7800903320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_CALPAEVRSY_	REV__SEC14L5|p.V592A|1|0.38|ENSG00000103184|chr16:5008623-5008623|T/C|missense_variant	44.116797842482775	0.5112108506279902	6				NaN	NaN	0	NaN	12799	4100	16899
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16902	42.362	NaN	1279.6	30	0	231.25	0.106			+	27022	LYSGSSHW	8	40	468.7135565022201	935.4125600712403	2	468.7142639160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LYSGSSHW_	REV__ENSG00000198198|ENST00000634258|SZT2;REV__nc|ENSG00000198198|Q5T011-5|SZT2;REV__SZT2|p.R3241Afs*11|1|0.33|ENSG00000198198|chr1:43448401-43448401|G/-|frameshift_variant	28.2542754592877	0.7411748056684583	6				NaN	NaN	0	NaN	12800	4100	16899
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16903	42.364	NaN	1834.8	30	0	173.11	0.106			+	25162	LLVATFPSSH	10	67	536.2943663367986	1070.574179740397	2	536.29443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LLVATFPSSH_	REV__ENSG00000164893|ENST00000297524|SLC7A13;REV__nc|ENSG00000164893|Q8TCU3-2|SLC7A13;REV__SLC7A13|p.S332I|1|0.06|ENSG00000164893|chr8:86217654-86217654|C/A|missense_variant	44.116797842482775	0.5112108506279902	6				NaN	NaN	0	NaN	12801	4100	16899
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16904	42.366	NaN	1661.5	30	0	194.05	0.106				-1	SPVFMQPVY	9	63	542.2615205955416	1082.508488257883	2	542.7640380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_SPVFM(Oxidation (M))QPVY_	ENSG00000161813|ENST00000398473|LARP4;ENST00000521120.1_1_12:50835423-50848201:+|nuORF;LARP4|p.N373Ifs*3|1|0.26|ENSG00000161813|chr12:50454408-50454408|A/-|frameshift_variant;nc|ENSG00000161813|Q71RC2-2|LARP4;nc|ENSG00000161813|Q71RC2-3|LARP4;nc|ENSG00000161813|Q71RC2-4|LARP4;nc|ENSG00000161813|Q71RC2-6|LARP4;nc|ENSG00000161813|Q71RC2-7|LARP4	34.172542307311794	0.4838870758800184	6				NaN	NaN	0	NaN	12802	4100	16899
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16905	42.368	NaN	1372.7	30	0	62.857	0.035	+			28068	NACGLYMKL	9	57	506.7521039665262	NaN	0	506.7514343261719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NACGLYMKL_	ENSG00000130700|ENST00000252997|GATA5;ENSG00000136574|ENST00000532059|GATA4;ENSG00000141448|ENST00000269216|GATA6;GATA6|p.K485Rfs*11|1|0.4|ENSG00000141448|chr18:22182778-22182779|AA/-|frameshift_variant;GATA6|p.T503Dfs*5|1|0.25|ENSG00000141448|chr18:22182830-22182831|-/A|frameshift_variant;nc|ENSG00000136574|P43694|GATA4;nc|ENSG00000141448|Q92908-2|GATA6	32.81241826257853	0.3119040447479903	6				NaN	NaN	0	NaN	12803	4100	16899
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16917	42.393	NaN	4229.5	30	0	413.43	0.214				-1	 	0	71	600.2889250623906	1198.5632971915811	2	600.7921142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12812	4103	16916
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16918	42.397	NaN	3995.2	30	0	694.02	0.106	+			18428	ISCFDINVQ	9	70	519.7492356023146	1037.483918271429	2	519.75048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ISCFDINVQ_	nc|ENSG00000183844|P58499-2|FAM3B	76.7741389293348	0.11149722112137898	6				NaN	NaN	0	NaN	12813	4103	16916
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16919	42.399	NaN	2643.9	30	0	206.22	0.106	+			11488	FPANNIVKF	9	56	525.2925792435981	NaN	0	525.29345703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FPANNIVKF_	ENSG00000124783|ENST00000244763|SSR1;nc|ENSG00000124783|P43307-2|SSR1	79.71258880314673	0.07236858429579222	6				NaN	NaN	0	NaN	12814	4103	16916
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16920	42.401	NaN	1681.3	30	0	247.58	0.106	+			51542	YYCLLLIF	8	59	552.7952880859375	NaN	0	552.7952880859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_YYC(Carbamidomethyl (C))LLLIF_	ENSG00000256797|ENST00000535540|KLRF2	43.626045697637714	1.7418937515398478	6				NaN	NaN	0	NaN	12815	4103	16916
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16921	42.402	NaN	1502.5	30	0	89.373	0.037	+			17180	HTQMVMALTL	10	50	588.7916870117188	NaN	0	588.7916870117188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Oxidation (M)	_HTQM(Oxidation (M))VM(Oxidation (M))ALTL_	ENSG00000163701|ENST00000383814|IL17RE;ENST00000383815.7_1_3:9944714-9956386:+|nuORF;ENST00000483258.1_1_3:9952571-9953043:+|nuORF;nc|ENSG00000163701|Q8NFR9-2|IL17RE;nc|ENSG00000163701|Q8NFR9-3|IL17RE;nc|ENSG00000163701|Q8NFR9-4|IL17RE	42.86426827375447	0.3507156137006061	6				NaN	NaN	0	NaN	12816	4103	16916
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16933	42.428	NaN	20129	30	0	2684	0.214				-1	 	0	80	495.7895550622627	989.5645571913254	2	495.79010009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12825	4106	16932
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16934	42.432	NaN	5167.5	30	0	591.62	0.106	+			7207	DAIRLAVSY	9	64	504.2787537050096	1006.5429544768192	2	504.279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DAIRLAVSY_	ENSG00000079974|ENST00000691320|RABL2B;ENSG00000144134|ENST00000683472|RABL2A;ENST00000436958.5_1_22:51207206-51220648:-|nuORF;ENST00000450954.5_1_2:114386257-114399703:+|nuORF;ENST00000465063.5_1_22:51207206-51208050:-|nuORF;ENST00000486403.1_1_2:114398907-114399703:+|nuORF;ENST00000494909.5_1_2:114398907-114399703:+|nuORF;nc|ENSG00000144134|Q9UBK7-3|RABL2A;nc|ENSG00000144134|Q9UBK7|RABL2A;nc|ENSG00000144134|Q9UNT1-3|RABL2B;nc|ENSG00000144134|Q9UNT1|RABL2B	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	12826	4106	16932
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16935	42.434	NaN	2365.6	30	0	281.95	0.106	+			25441	LPPGSVISY	9	65	466.7573783568928	931.5002037805856	2	466.7576904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LPPGSVISY_	ENSG00000182220|ENST00000636580|ATP6AP2;nc|ENSG00000182220|O75787-2|ATP6AP2	37.15910966729921	0.4535818937225704	6				NaN	NaN	0	NaN	12827	4106	16932
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16936	42.435	NaN	2585.3	30	0	253.67	0.106				-1	YLTAVCQGAT	10	60	542.2615205955416	1082.508488257883	2	542.262451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_YLTAVC(Carbamidomethyl (C))QGAT_	ENSG00000168234|ENST00000317571|TTC39C;nc|ENSG00000168234|Q8N584-2|TTC39C	42.86426827375447	0.522752283233888	6				NaN	NaN	0	NaN	12828	4106	16932
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16937	42.437	NaN	1686.5	30	0	187.45	0.034	+			35921	SEFSFSKL	8	60	472.73944777778786	943.4643426223757	2	472.7394714355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SEFSFSKL_	ENSG00000104133|ENST00000261866|SPG11;nc|ENSG00000104133|Q96JI7-2|SPG11;nc|ENSG00000104133|Q96JI7-3|SPG11	56.72105179125745	0.5342425954139568	6				NaN	NaN	0	NaN	12829	4106	16932
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16948	42.461	NaN	3939	30	0	447.7	0.214				-1	 	0	67	547.7970237573946	1093.5794945815892	2	547.796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12837	4109	16947
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16949	42.464	NaN	2724.4	30	0	416.89	0.035				-1	 	0	62	510.29716529708907	1018.5797776609782	2	510.7991638183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12838	4109	16947
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16964	42.496	NaN	2919	30	0	270.12	0.214	+			37998	SPLAARLLY	9	63	502.2988744379993	1002.5831959427986	2	502.30029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SPLAARLLY_	ENSG00000100300|ENST00000337554|TSPO	84.9155231211612	0.07920012719736333	6				NaN	NaN	0	NaN	12850	4112	16963
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16965	42.499	NaN	2641.4	30	0	384.5	0.106	+			21390	KMLKEKMQ	8	64	518.2859652053601	1034.55737747752	2	518.2871704101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KMLKEKMQ_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	62.107414245175825	0.4809183816468817	6				NaN	NaN	0	NaN	12851	4112	16963
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16966	42.501	NaN	3018.4	30	0	246.01	0.106	+			38022	SPNAIFKAL	9	61	480.778583066023	959.542613198846	2	480.7787780761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SPNAIFKAL_	ENSG00000125398|ENST00000245479|SOX9;SOX9|p.A379Gfs*5|1|0.71|ENSG00000125398|chr17:72123990-72123991|-/GG|frameshift_variant;SOX9|p.D274Wfs*6|1|0.18|ENSG00000125398|chr17:72123673-72123674|-/GT|frameshift_variant;SOX9|p.D290Rfs*6|1|0.39|ENSG00000125398|chr17:72123723-72123724|-/C|frameshift_variant;SOX9|p.E293Qfs*4|1|0.58|ENSG00000125398|chr17:72123728-72123729|-/TCAA|frameshift_variant;SOX9|p.E388*|1|0.21|ENSG00000125398|chr17:72124012-72124054|GAGCAGCGAGCCGGGCCAGTCCCAGCGAACGCACATCAAGACG/-|frameshift_variant;SOX9|p.F423Sfs*47|1|0.36|ENSG00000125398|chr17:72124124-72124124|T/-|frameshift_variant;SOX9|p.G233Afs*20|1|0.34|ENSG00000125398|chr17:72123553-72123553|G/-|frameshift_variant;SOX9|p.G256Rfs*24|1|0.34|ENSG00000125398|chr17:72123617-72123618|-/GA|frameshift_variant;SOX9|p.G390Rfs*14|1|0.67|ENSG00000125398|chr17:72124021-72124022|-/CC|frameshift_variant;SOX9|p.H396Rfs*8|1|0.11|ENSG00000125398|chr17:72124040-72124041|-/CG|frameshift_variant;SOX9|p.H413Lfs*58|1|0.37|ENSG00000125398|chr17:72124094-72124095|-/TG|frameshift_variant;SOX9|p.I435Sfs*35|1|0.25|ENSG00000125398|chr17:72124157-72124157|C/-|frameshift_variant;SOX9|p.P237Tfs*14|1|0.31|ENSG00000125398|chr17:72123564-72123565|CC/-|frameshift_variant;SOX9|p.P258Gfs*23|1|0.62|ENSG00000125398|chr17:72123621-72123622|-/GGGGC|frameshift_variant;SOX9|p.P307Cfs*77|1|0.27|ENSG00000125398|chr17:72123772-72123773|-/GT|frameshift_variant;SOX9|p.P374Rfs*9|1|0.38|ENSG00000125398|chr17:72123974-72123974|C/-|frameshift_variant;SOX9|p.Q416Nfs*54|1|0.48|ENSG00000125398|chr17:72124100-72124100|C/-|frameshift_variant;SOX9|p.R257Afs*39|3|0.16|ENSG00000125398|chr17:72123621-72123622|-/G|frameshift_variant;SOX9|p.R257Gfs*23|1|0.54|ENSG00000125398|chr17:72123621-72123622|-/GG|frameshift_variant;SOX9|p.R264Qfs*32|1|0.69|ENSG00000125398|chr17:72123639-72123640|-/G|frameshift_variant;SOX9|p.S408Tfs*64|1|0.62|ENSG00000125398|chr17:72124072-72124073|-/CACTA|frameshift_variant;SOX9|p.S448*|1|0.34|ENSG00000125398|chr17:72124200-72124201|CC/-|frameshift_variant;SOX9|p.T243Pfs*10|1|0.44|ENSG00000125398|chr17:72123576-72123576|C/-|frameshift_variant;SOX9|p.V291Afs*92|1|0.55|ENSG00000125398|chr17:72123729-72123729|T/-|frameshift_variant;SOX9|p.V306Cfs*77|2|0.32|ENSG00000125398|chr17:72123769-72123769|G/-|frameshift_variant	75.04331003522576	0.118981335847003	6				NaN	NaN	0	NaN	12852	4112	16963
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16967	42.503	NaN	3540.2	30	0	191.17	0.106	+			6069	AVMSATFAKF	10	70	536.7773287788775	1071.540104624555	2	536.7786865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVMSATFAKF_	ENSG00000077380|ENST00000397119|DYNC1I2;ENST00000435916.1_1_10:52025510-52026503:+|nuORF;ENST00000479806.1_1_2:172583261-172604396:+|nuORF;nc|ENSG00000077380|Q13409-2|DYNC1I2;nc|ENSG00000077380|Q13409-3|DYNC1I2;nc|ENSG00000077380|Q13409-5|DYNC1I2;nc|ENSG00000077380|Q13409-6|DYNC1I2;nc|ENSG00000077380|Q13409-7|DYNC1I2	62.107414245175825	0.3466735403679669	6				NaN	NaN	0	NaN	12853	4112	16963
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16968	42.505	NaN	1538.9	30	0	334.16	0.106	+			1918	AIRIIQERNG	10	58	585.3418579101562	NaN	0	585.3418579101562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AIRIIQERNG_	ENSG00000163001|ENST00000349456|CFAP36;nc|ENSG00000163001|Q96G28-2|CFAP36	26.063383197487333	0.4145965855542893	6				NaN	NaN	0	NaN	12854	4112	16963
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16969	42.506	NaN	2212.4	30	0	356.94	0.036			+	-1	HPLSRRLY	8	63	542.3076377244766	1082.6007225157532	2	542.3096313476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))HPLSRRLY_	REV__ENST00000299084.8_1_15:38643452-38643485:+|nuORF	45.9519527083369	0.6193794311207887	6				NaN	NaN	0	NaN	12855	4112	16963
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16980	42.532	NaN	7117.6	30	0	993.29	0.214			+	27041	LYYFTLHL	8	74	535.2896521441828	1068.5647513551655	2	535.2894287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LYYFTLHL_	REV__ENSG00000100296|ENST00000490103|THOC5;REV__ENST00000442555.5_1_22:29904448-29924274:-|nuORF	74.51659920185547	0.36926395944126233	6				NaN	NaN	0	NaN	12863	4115	16979
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16981	42.535	NaN	7698.3	30	0	900.82	0.106	+			39518	STFQQMWISK	10	82	628.3103593374726	1254.6061657417451	2	628.310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STFQQMWISK_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196604|ENST00000409914|POTEF;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000403258.1_1_6:88985645-88985837:-|nuORF;ENST00000423783.1_1_17:17146010-17146160:+|nuORF;ENST00000431536.1_1_1:78239597-78239909:-|nuORF;ENST00000441772.1_1_11:1824121-1824694:-|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000486001.1_1_1:27651822-27652284:+|nuORF;ENST00000493945.5_1_7:5567381-5567853:-|nuORF;ENST00000507366.1_1_5:79595499-79595778:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;nc|ENSG00000204434|Q9BYX7|POTEKP	167.93327368760816	0.004342583126626421	6				NaN	NaN	0	NaN	12864	4115	16979
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16982	42.537	NaN	6562	30	0	1514.4	0.106				-1	 	0	66	544.2593013291533	1086.5040497251066	2	544.2603149414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12865	4115	16979
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16983	42.539	NaN	2310.1	30	0	355.5	0.034	+			18390	IRIGSTPVL	9	62	478.2996910425357	954.5848291518714	2	478.29937744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IRIGSTPVL_	ENSG00000140505|ENST00000343932|CYP1A2	29.14955571784316	0.5308295550522326	6				NaN	NaN	0	NaN	12866	4115	16979
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16997	42.569	NaN	11149	30	0	1347.4	0.214	+			29279	NYIEKVVAI	9	71	524.8053291871776	1047.596105441155	2	524.8060302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NYIEKVVAI_	ENSG00000136754|ENST00000376140|ABI1;nc|ENSG00000136754|Q8IZP0-10|ABI1;nc|ENSG00000136754|Q8IZP0-11|ABI1;nc|ENSG00000136754|Q8IZP0-12|ABI1;nc|ENSG00000136754|Q8IZP0-2|ABI1;nc|ENSG00000136754|Q8IZP0-3|ABI1;nc|ENSG00000136754|Q8IZP0-4|ABI1;nc|ENSG00000136754|Q8IZP0-5|ABI1;nc|ENSG00000136754|Q8IZP0-6|ABI1;nc|ENSG00000136754|Q8IZP0-7|ABI1;nc|ENSG00000136754|Q8IZP0-8|ABI1;nc|ENSG00000136754|Q8IZP0|ABI1	58.22992032128504	0.22837015374068087	6				NaN	NaN	0	NaN	12877	4118	16996
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16998	42.572	NaN	3746.8	30	0	571.81	0.106	+			42615	TATSVQDVF	9	62	484.23940081498046	966.4642486967609	2	484.2399597167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TATSVQDVF_	ENSG00000167861|ENST00000425042|HID1;ENST00000528902.1_1_17:72960370-72968856:-|nuORF;HID1|p.L141Wfs*62|1|0.54|ENSG00000167861|chr17:74963048-74963048|G/-|frameshift_variant;HID1|p.P773Lfs*8|1|0.17|ENSG00000167861|chr17:74951619-74951619|G/-|frameshift_variant;nc|ENSG00000167861|Q8IV36-2|HID1	46.45678178249821	0.34452392205506005	6				NaN	NaN	0	NaN	12878	4118	16996
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16999	42.574	NaN	1795.6	30	0	122.16	0.106	+			25730	LRSALRSQ	8	60	465.778484796823	929.5424166604461	2	465.7781677246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LRSALRSQ_	ENSG00000272333|ENST00000420124|KMT2B;KMT2B|p.A1049Gfs*39|1|0.32|ENSG00000272333|chr19:35723812-35723813|-/G|frameshift_variant;KMT2B|p.A2538Pfs*76|1|0.42|ENSG00000272333|chr19:35737693-35737693|G/-|frameshift_variant;KMT2B|p.D1589Gfs*89|1|0.28|ENSG00000272333|chr19:35729058-35729059|-/G|frameshift_variant;KMT2B|p.G1199Afs*156|1|0.16|ENSG00000272333|chr19:35725283-35725283|G/-|frameshift_variant;KMT2B|p.G1879Vfs*16|5|0.4|ENSG00000272333|chr19:35732101-35732101|G/-|frameshift_variant;KMT2B|p.G2123Vfs*30|1|0.34|ENSG00000272333|chr19:35732913-35732913|G/-|frameshift_variant;KMT2B|p.G934Efs*52|1|0.1|ENSG00000272333|chr19:35723069-35723069|G/-|frameshift_variant;KMT2B|p.K553Qfs*46|1|0.45|ENSG00000272333|chr19:35720996-35720997|-/C|frameshift_variant;KMT2B|p.L2136Pfs*17|1|0.27|ENSG00000272333|chr19:35732956-35732956|T/-|frameshift_variant;KMT2B|p.P1201Rfs*154|1|0.37|ENSG00000272333|chr19:35725288-35725288|C/-|frameshift_variant;KMT2B|p.P174Qfs*20|1|0.38|ENSG00000272333|chr19:35719862-35719862|C/-|frameshift_variant;KMT2B|p.P1821Hfs*74|1|0.36|ENSG00000272333|chr19:35731927-35731927|C/-|frameshift_variant;KMT2B|p.R1055Gfs*127|1|0.46|ENSG00000272333|chr19:35723827-35723827|G/-|frameshift_variant;KMT2B|p.R1911Dfs*23|1|0.18|ENSG00000272333|chr19:35732274-35732274|C/-|frameshift_variant	55.50420428727701	0.5462892107279674	6				NaN	NaN	0	NaN	12879	4118	16996
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17000	42.576	NaN	1622.3	30	0	207.78	0.037	+			25531	LPTEPPYTAY	10	62	576.2841158180985	1150.5536787029969	2	576.2861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LPTEPPYTAY_	ENSG00000106682|ENST00000265753|EIF4H;ENST00000479338.5_1_7:73588713-73604094:+|nuORF;ENST00000489484.5_1_7:73588713-73604262:+|nuORF;nc|ENSG00000106682|Q15056-2|EIF4H	56.72105179125745	0.3956618550748046	6				NaN	NaN	0	NaN	12880	4118	16996
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17012	42.602	NaN	3986.4	30	0	269.71	0.214	+			32731	RAPAPRGG	8	59	391.22486075361206	780.4351685740241	2	391.22491455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RAPAPRGG_	ENSG00000261308|ENST00000618634|FIGNL2	26.79610172149135	0.7524337208463756	6				NaN	NaN	0	NaN	12889	4121	17011
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17013	42.605	NaN	3927	30	0	764.7	0.106	+			18471	ISFGAFVAK	9	56	470.2679772007429	938.5214014682858	2	470.268310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ISFGAFVAK_	ENSG00000143384|ENST00000369026|MCL1	93.19546047674547	0.05585629608842056	6				NaN	NaN	0	NaN	12890	4121	17011
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17014	42.607	NaN	6192.1	30	0	592.41	0.106	+			42126	SYLQAANAL	9	67	475.7500175068637	949.4854820805274	2	475.7501220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SYLQAANAL_	COL6A3|p.A2956Lfs*45|1|0.33|ENSG00000163359|chr2:237336234-237336234|C/-|frameshift_variant;COL6A3|p.A2957Lfs*44|1|0.33|ENSG00000163359|chr2:237336232-237336232|A/-|frameshift_variant;COL6A3|p.G1770Vfs*12|1|0.05|ENSG00000163359|chr2:237366878-237366879|-/TGGTGTAA|frameshift_variant;COL6A3|p.G2207Efs*35|1|0.22|ENSG00000163359|chr2:237354908-237354908|G/-|frameshift_variant;COL6A3|p.G3016Vfs*19|1|0.34|ENSG00000163359|chr2:237334810-237334810|G/-|frameshift_variant;COL6A3|p.P2319Qfs*12|1|0.06|ENSG00000163359|chr2:237348359-237348359|G/-|frameshift_variant;COL6A3|p.R768H|1|0.3|ENSG00000163359|chr2:237378830-237378830|C/T|missense_variant;COL6A3|p.V1771Sfs*8|3|0.08|ENSG00000163359|chr2:237366876-237366876|C/-|frameshift_variant;ENSG00000163359|ENST00000295550|COL6A3;nc|ENSG00000163359|P12111-2|COL6A3;nc|ENSG00000163359|P12111-3|COL6A3;nc|ENSG00000163359|P12111-5|COL6A3	72.87924865735499	0.12833875048249987	6				NaN	NaN	0	NaN	12891	4121	17011
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17015	42.609	NaN	2621.7	30	0	301.81	0.106	+			18502	ISHYAMMKK	9	66	562.7852191198958	1123.5558853065916	2	562.7868041992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_ISHYAM(Oxidation (M))MKK_	ENSG00000162434|ENST00000342505|JAK1;JAK1|p.K860Nfs*16|3|0.29|ENSG00000162434|chr1:64841314-64841314|T/-|frameshift_variant;JAK1|p.L346Tfs*4|1|0.28|ENSG00000162434|chr1:64864927-64864928|-/T|frameshift_variant;JAK1|p.N339Ifs*3|2|0.36|ENSG00000162434|chr1:64864947-64864947|T/-|frameshift_variant	73.97473282117947	0.12360187025703594	6				NaN	NaN	0	NaN	12892	4121	17011
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17016	42.611	NaN	2555.8	30	0	474.26	0.106	+			17607	IEGPIIKL	8	57	441.7860092678252	881.5574656024504	2	441.7864990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IEGPIIKL_	ENSG00000101596|ENST00000320876|SMCHD1;ENST00000584897.5_1_18:2726458-2784452:+|nuORF;nc|ENSG00000101596|A6NHR9-2|SMCHD1;nc|ENSG00000101596|A6NHR9-3|SMCHD1;SMCHD1|p.L1362I|1|0.23|ENSG00000101596|chr18:2750426-2750426|C/A|missense_variant	63.30626980617807	0.4690498839812213	6				NaN	NaN	0	NaN	12893	4121	17011
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17017	42.613	NaN	1508.8	30	0	181.06	0.106	+			27593	MPLECAIH	8	53	457.216649111209	912.418745289218	2	457.2177429199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MPLECAIH_	ENSG00000113594|ENST00000453190|LIFR;ENST00000503088.1_1_5:38490841-38530749:-|nuORF;LIFR|p.F700Sfs*16|1|0.11|ENSG00000113594|chr5:38490258-38490258|A/-|frameshift_variant	35.200714571348534	0.6875396545722289	6				NaN	NaN	0	NaN	12894	4121	17011
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17018	42.615	NaN	840.9	30	0	51.041	0.031				-1	 	0	44	347.1982823180995	692.382011702999	2	347.1986999511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12895	4121	17011
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17032	42.644	NaN	5905.8	30	0	369.54	0.214				-1	 	0	66	369.21164815012617	736.4087433670524	2	369.2119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12906	4124	17031
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17033	42.648	NaN	2403.5	30	0	281.43	0.106	+			1894	AIMENANVL	9	53	487.7515827366413	973.4886125400826	2	487.75213623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AIMENANVL_	ENSG00000149925|ENST00000642816|ALDOA;ENST00000566146.1_1_16:30080209-30080764:+|nuORF;nc|ENSG00000149925|P04075|ALDOA	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	12907	4124	17031
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17034	42.65	NaN	1527.3	30	0	185.72	0.106	+			50007	WASVASSL	8	40	410.71324040116565	819.4119278691313	2	410.7130126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_WASVASSL_	ENST00000545453.5_2_13:73355107-73355970:-|nuORF;nc|ENSG00000083520|Q9Y2L1-2|DIS3	40.5726180659479	0.6527593143185008	6				NaN	NaN	0	NaN	12908	4124	17031
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17035	42.651	NaN	1374.8	30	0	149.22	0.106				-1	YIAMGQRM	8	52	493.2339420773312	NaN	0	493.2342529296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_YIAMGQRM(Oxidation (M))_	ENSG00000153767|ENST00000283875|GTF2E1;GTF2E1|p.D436G|1|0.26|ENSG00000153767|chr3:120781457-120781457|A/G|missense_variant	49.21078951299608	1.7418937515398478	6				NaN	NaN	0	NaN	12909	4124	17031
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17036	42.653	NaN	1628.7	30	0	172.97	0.106			+	12014	FWGPLHPFI	9	60	557.3007181521164	NaN	0	557.3009033203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FWGPLHPFI_	REV__ENST00000264025.7_1_11:119599202-119599379:-|nuORF	39.021493756699265	0.2805557132942146	6				NaN	NaN	0	NaN	12910	4124	17031
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17037	42.655	NaN	2616.7	30	0	353.52	0.035	+			44386	TSLIPATMR	9	66	503.27182385471264	1004.5290947762253	2	503.7734680175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_TSLIPATM(Oxidation (M))R_	ENST00000463191.1_1_2:46583887-46583935:+|nuORF	41.42661286455405	0.403525789677298	6				NaN	NaN	0	NaN	12911	4124	17031
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17038	42.656	NaN	1117.8	30	0	152.8	0.14			+	24199	LEQQLGKVL	9	47	514.3109130859375	NaN	0	514.3109130859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LEQQLGKVL_	REV__ENSG00000100523|ENST00000673822|DDHD1;REV__nc|ENSG00000100523|Q8NEL9-2|DDHD1;REV__nc|ENSG00000100523|Q8NEL9-3|DDHD1;REV__nc|ENSG00000100523|Q8NEL9-4|DDHD1	19.996771675451527	0.3693019437812985	6				NaN	NaN	0	NaN	12912	4124	17031
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17049	42.683	NaN	5156.1	30	0	352.77	0.214			+	31166	QGKFLVQSY	9	70	535.2896521441828	1068.5647513551655	2	535.7981567382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QGKFLVQSY_	REV__ENSG00000232810|ENST00000449264|TNF	37.81151784470057	0.4459294069877048	6				NaN	NaN	0	NaN	12920	4127	17048
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17050	42.686	NaN	3977.4	30	0	497.88	0.106	+			9764	ENLQAKGMK	9	60	509.77058370163024	1017.5266144700605	2	510.2708435058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ENLQAKGMK_	tr|U7ST27|U7ST27_FUSNUCarboxyl-terminalprocessingproteaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01258PE=3SV=1	65.46538089061403	0.16805504838372562	6				NaN	NaN	0	NaN	12921	4127	17048
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17051	42.688	NaN	2261.7	30	0	207.16	0.106	+			11032	FEKTLTPII	9	72	531.3156225122029	1060.6166920912058	2	531.3163452148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FEKTLTPII_	ENSG00000150593|ENST00000280154|PDCD4;ENST00000462577.5_1_10:112645037-112653861:+|nuORF;nc|ENSG00000150593|Q53EL6-2|PDCD4	66.42927471994793	0.16001998865088202	6				NaN	NaN	0	NaN	12922	4127	17048
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17052	42.69	NaN	3068.5	30	0	282.39	0.106			+	42052	SWSTIVTFI	9	66	527.2843099496263	1052.5540669660525	2	527.2853393554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SWSTIVTFI_	REV__ENST00000297591.9_1_8:95531645-95538493:-|nuORF	63.30626980617807	0.18605348971131092	6				NaN	NaN	0	NaN	12923	4127	17048
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17053	42.692	NaN	1811.8	30	0	204.93	0.034	+			26205	LSSARLPPE	9	55	485.27243432330704	968.5303157134141	2	485.2728271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSSARLPPE_	ENSG00000161847|ENST00000617231|RAVER1;nc|ENSG00000161847|Q8IY67-2|RAVER1	52.936696900407355	0.27249468807391813	6				NaN	NaN	0	NaN	12924	4127	17048
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17067	42.721	NaN	8335.6	30	0	1317.5	0.214				-1	 	0	63	472.2634401172672	942.5123273013344	2	472.2637634277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12935	4130	17066
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17068	42.724	NaN	3956.2	30	0	295.54	0.106	+			36281	SEPPVYANL	9	73	495.25007682511057	988.4856007170212	2	495.2505798339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEPPVYANL_	ENSG00000177606|ENST00000371222|JUN;JUN|p.R257Kfs*53|1|0.31|ENSG00000177606|chr1:58782301-58782302|-/T|frameshift_variant	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	12936	4130	17066
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17069	42.726	NaN	2809.3	30	0	221.37	0.106	+			3370	ASNWLYLAK	9	67	533.2891750354975	1064.5637971377948	2	533.2904052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASNWLYLAK_	ENSG00000162552|ENST00000290167|WNT4	80.91624569148213	0.09358672614454815	6				NaN	NaN	0	NaN	12937	4130	17066
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17070	42.728	NaN	3211.6	30	0	469.72	0.106			+	43751	TLFFANLID	9	71	527.2843099496263	1052.5540669660525	2	527.2854614257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TLFFANLID_	REV__tr|U7STX1|U7STX1_FUSNUUracil-DNAglycosylaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=ungPE=3SV=1	47.657333605630114	0.33044192980041115	6				NaN	NaN	0	NaN	12938	4130	17066
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17071	42.73	NaN	2342.2	30	0	276.64	0.035	+			50458	YAETIAHIL	9	62	515.7819213867188	NaN	0	515.7819213867188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YAETIAHIL_	ENSG00000253710|ENST00000521508|ALG11	76.84663266511073	0.08218905260741291	6				NaN	NaN	0	NaN	12939	4130	17066
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17083	42.756	NaN	6798.7	30	0	990.31	0.214	+			47208	VMAPRTLLL	9	70	507.31223440840216	1012.6099158836043	2	507.3133544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VMAPRTLLL_	ENSG00000206503|ENST00000376809|HLA-A;ENST00000463348.5_1_6:30227401-30227711:+|nuORF;ENST00000495183.5_1_6:29910330-29910808:+|nuORF;ENST00000496081.5_1_6:29910330-29912419:+|nuORF;nc|ENSG00000206503|P04439-2|HLA-A	51.19269402634007	0.2889735674168909	6				NaN	NaN	0	NaN	12948	4133	17082
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17084	42.759	NaN	6769.8	30	0	2216.7	0.106				-1	 	0	63	487.7865943005991	973.5586356679983	2	487.786865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12949	4133	17082
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17085	42.761	NaN	3697.1	30	0	465.46	0.106	+			51537	YWRLDCKCI	9	70	600.2889250623906	1198.5632971915811	2	600.29052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YWRLDCKCI_	ENSG00000105287|ENST00000291281|PRKD2;ENST00000597589.5_1_19:47177782-47200527:-|nuORF;ENST00000599019.5_1_19:47177782-47200527:-|nuORF;nc|ENSG00000105287|Q9BZL6-2|PRKD2;nc|ENSG00000105287|Q9BZL6-3|PRKD2;PRKD2|p.D633Tfs*5|1|0.38|ENSG00000105287|chr19:46689611-46689611|C/-|frameshift_variant	49.44154591367651	0.3095138337212152	6				NaN	NaN	0	NaN	12950	4133	17082
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17086	42.763	NaN	8077.7	30	0	1220.6	0.106	+			49528	VYAILTHGI	9	62	493.7867273439159	985.5589017546318	2	493.78692626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VYAILTHGI_	ENSG00000101911|ENST00000380668|PRPS2;ENSG00000147224|ENST00000372435|PRPS1;ENSG00000229937|ENST00000506618|PRPS1L1;nc|ENSG00000101911|P11908-2|PRPS2;nc|ENSG00000147224|P60891-2|PRPS1;PRPS1|p.T242I|1|0.5|ENSG00000147224|chrX:107647626-107647626|C/T|missense_variant	119.55681237560556	0.021468056596162587	6				NaN	NaN	0	NaN	12951	4133	17082
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17087	42.765	NaN	4040.7	30	0	402.24	0.106	+			46292	VEILQHVI	8	61	475.78718668842833	949.5598204436567	2	475.7868957519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VEILQHVI_	ENSG00000125968|ENST00000376112|ID1;ENSG00000172201|ENST00000378700|ID4;ID1|p.G120Afs*20|1|0.38|ENSG00000125968|chr20:31605737-31605737|C/-|frameshift_variant;nc|ENSG00000125968|P41134-2|ID1	87.75429964447693	0.2842685068779738	6				NaN	NaN	0	NaN	12952	4133	17082
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17088	42.767	NaN	1615.1	30	0	104.62	0.036	+			35571	SAYEFYHAL	9	65	550.7562255859375	NaN	0	550.7562255859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SAYEFYHAL_	ENSG00000116016|ENST00000263734|EPAS1	44.116797842482775	0.2472372736944149	6				NaN	NaN	0	NaN	12953	4133	17082
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17089	42.767	NaN	1769.6	30	0	104.93	0.14	+			30155	PSDITIYHL	9	57	529.7806005113051	1057.5466480894102	2	529.7807006835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PSDITIYHL_	ENSG00000104133|ENST00000261866|SPG11;nc|ENSG00000104133|Q96JI7-2|SPG11;nc|ENSG00000104133|Q96JI7-3|SPG11	60.97194046774394	0.20551255781574032	6				NaN	NaN	0	NaN	12954	4133	17082
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17102	42.796	NaN	9568.8	30	0	1452.3	0.213	+			29343	NYTNGSFGSNF	11	79	604.2534031703565	1206.4922534075129	2	604.25439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NYTNGSFGSNF_	DDX5|p.D572Nfs*6|1|0.04|ENSG00000108654|chr17:64500054-64500055|-/TGACAAGATAGTT|frameshift_variant;ENSG00000108654|ENST00000225792|DDX5;ENST00000581230.5_1_17:62496043-62497015:-|nuORF;nc|ENSG00000108654|P17844-2|DDX5	180.65854172754518	7.743502238557272E-06	6				NaN	NaN	0	NaN	12964	4136	17101
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17103	42.8	NaN	2502.1	30	0	289.9	0.106			+	-1	FTVCNITI	8	63	484.249013509996	966.4834740867921	2	484.2493896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_FTVC(Carbamidomethyl (C))NITI_	REV__ENSG00000007237|ENST00000432992|GAS7;REV__nc|ENSG00000007237|O60861-1|GAS7;REV__nc|ENSG00000007237|O60861-2|GAS7;REV__nc|ENSG00000007237|O60861-4|GAS7	79.45101966838831	0.3281480470254892	6				NaN	NaN	0	NaN	12965	4136	17101
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17104	42.802	NaN	2232.6	30	0	220.26	0.106			+	48110	VSTVPLGPY	9	56	466.7573783568928	931.5002037805856	2	466.7575988769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSTVPLGPY_	REV__ENST00000572615.1_1_17:1372344-1373609:-|nuORF	31.954861631926434	0.5046124803899898	6				NaN	NaN	0	NaN	12966	4136	17101
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17105	42.804	NaN	2526.6	30	0	199.69	0.106	+			24813	LIPLVNLMD	9	68	514.2952849735519	NaN	0	514.29541015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LIPLVNLMD_	QRSL1|p.S226L|3|0.25|ENSG00000130348|chr6:106652328-106652328|C/T|missense_variant	41.42661286455405	0.26577678759562784	6				NaN	NaN	0	NaN	12967	4136	17101
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17106	42.805	NaN	3400.1	30	0	1074.1	0.106	+			36556	SFPESARPK	9	63	509.77058370163024	1017.5266144700605	2	510.2721252441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SFPESARPK_	KMT2D|p.S4955F|1|0.28|ENSG00000167548|chr12:49027102-49027102|G/A|missense_variant	51.33545320467046	0.2872990594074956	6				NaN	NaN	0	NaN	12968	4136	17101
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17107	42.807	NaN	1843	30	0	172.16	0.036			+	11478	FNVAVDEFI	9	65	527.2655918740021	NaN	0	527.2655639648438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FNVAVDEFI_	REV__ENST00000344893.4_1_19:11759178-11789136:+|nuORF	47.657333605630114	0.2228375344433429	6				NaN	NaN	0	NaN	12969	4136	17101
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17118	42.833	NaN	3439.1	30	0	205.71	0.144	+			11489	FPANNIVKF	9	74	525.2926919222043	NaN	0	525.2927856445312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FPANNIVKF_	ENSG00000124783|ENST00000244763|SSR1;nc|ENSG00000124783|P43307-2|SSR1	42.86426827375447	0.2558691296974908	6				NaN	NaN	0	NaN	12977	4139	17117
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17130	42.86	NaN	3087.2	30	0	434.56	0.214	+			45374	TVTEVLLKY	9	65	533.3128557482105	1064.611158563221	2	533.3133544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVTEVLLKY_	ENSG00000085721|ENST00000198767|RRN3;ENST00000427965.6_1_16:29086353-29124388:+|nuORF;ENST00000551901.5_1_16:21823661-21831677:-|nuORF;ENST00000564580.5_1_16:29086353-29108616:+|nuORF;ENST00000566038.1_1_16:29086353-29102074:+|nuORF;nc|ENSG00000085721|Q9NYV6-2|RRN3;nc|ENSG00000085721|Q9NYV6-3|RRN3;nc|ENSG00000103472|A6NIE6|RRN3P2	28.081489160057373	0.5408112046645406	6				NaN	NaN	0	NaN	12986	4142	17129
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17131	42.864	NaN	2094.5	30	0	135.03	0.034	+			24668	LGVQSPTFC	9	56	476.23544231229164	950.4563316913833	2	476.2345886230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LGVQSPTFC_	ENST00000445118.6_1_1:792787-792877:+|nuORF	35.61828744233558	0.47037581924408073	6				NaN	NaN	0	NaN	12987	4142	17129
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17142	42.887	NaN	3357.9	30	0	522.19	0.214				-1	 	0	60	544.2593013291533	1086.5040497251066	2	544.2609252929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12995	4145	17141
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17143	42.891	NaN	985.91	30	0	89.241	0.037			+	43744	TLCPHPSTPTL	11	58	583.7971498973847	1165.5797468615692	2	583.7988891601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TLCPHPSTPTL_	REV__ENST00000511220.1_1_5:92603163-92603583:+|nuORF	39.252832667884924	0.5681665794958463	6				NaN	NaN	0	NaN	12996	4145	17141
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17155	42.917	NaN	2300.9	30	0	399.55	0.214			+	30989	QERLYEVY	8	62	550.2743950370959	1098.5342371409918	2	550.2755737304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QERLYEVY_	REV__ENSG00000185278|ENST00000367701|ZBTB37;REV__ZBTB37|p.I398Dfs*70|1|0.34|ENSG00000185278|chr1:173885799-173885800|-/G|frameshift_variant	44.116797842482775	0.6307669463330267	6				NaN	NaN	0	NaN	13005	4148	17154
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17156	42.92	NaN	3312.1	30	0	343.55	0.106	+			48235	VTCNFIILR	9	75	568.317991675641	1134.621430418082	2	568.3192749023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_VTC(Carbamidomethyl (C))NFIILR_	ENSG00000221829|ENST00000378643|FANCG	134.7655990226056	0.012935733000282069	6				NaN	NaN	0	NaN	13006	4148	17154
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17157	42.922	NaN	1775.1	30	0	338.42	0.033			+	17789	IETLVLAK	8	60	443.7833726439473	885.5521923546946	2	443.7833251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IETLVLAK_	REV__ENSG00000141401|ENST00000269159|IMPA2;REV__ENST00000588167.1_1_18:12009921-12028151:+|nuORF;REV__nc|ENSG00000141401|O14732-2|IMPA2	51.33545320467046	0.5859736979383976	6				NaN	NaN	0	NaN	13007	4148	17154
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17166	42.942	NaN	3768.9	30	0	196.58	0.215	+			374	AARPRPGG	8	61	391.22486075361206	780.4351685740241	2	391.2249755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AARPRPGG_	ENST00000533069.1_1_11:394244-396720:+|nuORF;ENST00000589123.5_2_19:3462863-3463967:+|nuORF	29.841539824830324	0.7289191502596711	6				NaN	NaN	0	NaN	13013	4151	17165
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17167	42.946	NaN	3328.1	30	0	435.39	0.106	+			25532	LPTEPPYTAY	10	65	576.2841158180985	1150.5536787029969	2	576.2847900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LPTEPPYTAY_	ENSG00000106682|ENST00000265753|EIF4H;ENST00000479338.5_1_7:73588713-73604094:+|nuORF;ENST00000489484.5_1_7:73588713-73604262:+|nuORF;nc|ENSG00000106682|Q15056-2|EIF4H	49.44154591367651	0.46214596422418036	6				NaN	NaN	0	NaN	13014	4151	17165
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17168	42.948	NaN	3264.7	30	0	551.01	0.106	+			2243	ALTEGYVGAL	10	61	497.26580087497274	992.5170488167455	2	497.2659912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ALTEGYVGAL_	ENSG00000144724|ENST00000474889|PTPRG;ENST00000475527.1_1_3:61547928-61734772:+|nuORF;ENST00000495879.1_1_3:61547928-61755020:+|nuORF;nc|ENSG00000144724|P23470-2|PTPRG;PTPRG|p.A885Efs*11|1|0.09|ENSG00000144724|chr3:62262891-62262892|-/AAACAAAGGAA|frameshift_variant;PTPRG|p.E1273*|1|0.29|ENSG00000144724|chr3:62281605-62281606|-/TGAACTGT|frameshift_variant;PTPRG|p.Q1315Sfs*12|1|0.24|ENSG00000144724|chr3:62282754-62282754|T/-|frameshift_variant	47.91560031466742	0.4762067885998563	6				NaN	NaN	0	NaN	13015	4151	17165
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17169	42.949	NaN	2276.8	30	0	474.83	0.033			+	31557	QLNIAPQL	8	49	448.76308059110437	895.5116082490088	2	448.7633972167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QLNIAPQL_	REV__ENST00000529246.3_1_6:49519296-49519380:+|nuORF	60.29395666154354	0.49887135096048313	6				NaN	NaN	0	NaN	13016	4151	17165
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17175	42.966	NaN	1130.4	30	0	165.78	0.214			+	48747	VTVLAGSLT	9	48	430.7582702636719	NaN	0	430.7582702636719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTVLAGSLT_	REV__ENSG00000176945|ENST00000447234|MUC20;REV__nc|ENSG00000176945|Q8N307-3|MUC20	35.61828744233558	0.29773779453147337	6				NaN	NaN	0	NaN	13019	4154	17174
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17176	42.969	NaN	1611.9	30	0	115.49	0.106	+			18749	ITKVIVLAE	9	62	493.3181029410582	984.6216529489164	2	493.3189697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ITKVIVLAE_	ENST00000604297.1_1_X:46421090-46422044:-|nuORF	26.69291269510374	0.5537881896960711	6				NaN	NaN	0	NaN	13020	4154	17174
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17177	42.971	NaN	1924.8	30	0	133.7	0.106			+	7613	DKEGFVSKL	9	67	511.7788468037238	NaN	0	511.77880859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DKEGFVSKL_	REV__ENST00000401408.5_1_2:55455228-55459402:-|nuORF;REV__ENST00000494539.5_1_2:55402928-55459402:-|nuORF	45.02220120713402	0.24099765136254067	6				NaN	NaN	0	NaN	13021	4154	17174
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17178	42.973	NaN	2127	30	0	114.29	0.106	+			2798	ARSLVAGQTF	10	63	525.2926919222043	NaN	0	525.2929077148438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ARSLVAGQTF_	ENST00000450728.1_1_2:200334820-200335477:+|nuORF	47.95952297671804	0.31850267256932663	6				NaN	NaN	0	NaN	13022	4154	17174
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17179	42.975	NaN	1716.1	30	0	386.32	0.106	+			51493	YVLGHVTL	8	52	451.26028797169283	900.5060230101857	2	451.26068115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YVLGHVTL_	ENSG00000146828|ENST00000354161|SLC12A9;nc|ENSG00000146828|Q9BXP2-2|SLC12A9;nc|ENSG00000146828|Q9BXP2-3|SLC12A9;nc|ENSG00000146828|Q9BXP2-4|SLC12A9;SLC12A9|p.R676Gfs*18|1|0.3|ENSG00000146828|chr7:100865882-100865882|C/-|frameshift_variant	29.841539824830324	0.7289191502596711	6				NaN	NaN	0	NaN	13023	4154	17174
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17180	42.977	NaN	1669	30	0	207.28	0.106	+			41062	SVIGVFITK	9	51	482.2966912027654	962.5788294723308	2	482.2972412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVIGVFITK_	ENSG00000185052|ENST00000328041|SLC24A3;SLC24A3|p.K341Rfs*11|2|0.31|ENSG00000185052|chr20:19684289-19684289|C/-|frameshift_variant	51.19269402634007	0.2889735674168909	6				NaN	NaN	0	NaN	13024	4154	17174
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17181	42.978	NaN	1827.2	30	0	201.87	0.036			+	-1	MVKVPIFVM	9	65	540.3041661583101	NaN	0	540.3040771484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_MVKVPIFVM(Oxidation (M))_	REV__ENST00000212015.10_1_10:69644897-69647288:+|nuORF;REV__ENST00000497639.5_1_10:69644980-69647288:+|nuORF	40.5726180659479	0.27166212580479165	6				NaN	NaN	0	NaN	13025	4154	17174
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17193	43.004	NaN	5321.3	30	0	335.76	0.214				-1	 	0	79	369.21164815012617	736.4087433670524	2	369.21185302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13034	4157	17192
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17194	43.007	NaN	5314	30	0	845.49	0.106			+	15048	GTNPWTDAL	9	58	487.7321094664555	973.449665999711	2	487.732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTNPWTDAL_	REV__ENSG00000169855|ENST00000464233|ROBO1;REV__nc|ENSG00000169855|Q9Y6N7-2|ROBO1;REV__nc|ENSG00000169855|Q9Y6N7-3|ROBO1;REV__nc|ENSG00000169855|Q9Y6N7-4|ROBO1;REV__nc|ENSG00000169855|Q9Y6N7-5|ROBO1;REV__nc|ENSG00000169855|Q9Y6N7-6|ROBO1;REV__ROBO1|p.K1491Nfs*16|1|0.2|ENSG00000169855|chr3:78607004-78607004|C/-|frameshift_variant;REV__ROBO1|p.R1504Sfs*40|1|0.01|ENSG00000169855|chr3:78606968-78606969|-/TGAC|frameshift_variant	34.172542307311794	0.4838870758800184	6				NaN	NaN	0	NaN	13035	4157	17192
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17195	43.009	NaN	7625.2	30	0	1728.7	0.106				-1	 	0	63	475.7502412829165	949.485929632633	2	475.75042724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13036	4157	17192
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17196	43.011	NaN	4827.7	30	0	441.94	0.106	+			45596	TYPAELNNI	9	66	517.7607269260034	1033.5069009188067	2	517.7615966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TYPAELNNI_	ENSG00000106546|ENST00000242057|AHR	95.81516180277367	0.04847050768394289	6				NaN	NaN	0	NaN	13037	4157	17192
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17197	43.013	NaN	2607.1	30	0	560	0.106	+			38725	SSLGAWSL	8	45	410.71324040116565	819.4119278691313	2	410.7135009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSLGAWSL_	ENSG00000197077|ENST00000358431|KIAA1671;KIAA1671|p.S1569Afs*58|1|0.46|ENSG00000197077|chr22:25174289-25174289|C/-|frameshift_variant;KIAA1671|p.T1322Rfs*192|1|0.18|ENSG00000197077|chr22:25041088-25041088|A/-|frameshift_variant	33.51558372728122	0.7005509609380386	6				NaN	NaN	0	NaN	13038	4157	17192
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17198	43.015	NaN	3522.2	30	0	1090.8	0.039	+			28737	NNSLQNLYLLV	11	55	645.856444401552	1289.698335869904	2	645.8548583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NNSLQNLYLLV_	nc|ENSG00000163291|Q6TCH7-2|PAQR3	18.262085536374414	0.7849791996189919	6				NaN	NaN	0	NaN	13039	4157	17192
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17199	43.015	NaN	1371.4	30	0	228.81	0.142				-1	EMKERGGN	8	55	468.7137170668419	935.4128812004839	2	468.7135009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_EM(Oxidation (M))KERGGN_	ENSG00000105771|ENST00000270066|SMG9;ENST00000595700.5_1_19:44242246-44254893:-|nuORF;nc|ENSG00000105771|Q9H0W8-2|SMG9;SMG9|p.H366Tfs*2|1|0.22|ENSG00000105771|chr19:43734395-43734395|G/-|frameshift_variant	38.80614096846853	0.6637206697844082	6				NaN	NaN	0	NaN	13040	4157	17192
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17212	43.045	NaN	16230	30	0	4470.2	0.214	+			2323	AMLDTVVFK	9	73	512.280124757314	1022.5456965814279	2	512.2808837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AMLDTVVFK_	ENSG00000115233|ENST00000409682|PSMD14;ENST00000477232.5_1_2:162241962-162267908:+|nuORF;ENST00000492908.1_1_2:162265323-162267908:+|nuORF	136.26810882979174	0.012230845423532208	6				NaN	NaN	0	NaN	13050	4160	17211
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17213	43.048	NaN	6204.9	30	0	588.53	0.106	+			2143	ALLDGSNVVFK	11	72	581.8262067324589	1161.6378605317177	2	581.8268432617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ALLDGSNVVFK_	ENSG00000204220|ENST00000374606|PFDN6;ENST00000395134.3_1_6:33257633-33258228:+|nuORF;ENST00000491382.1_1_6:33257633-33258228:+|nuORF	77.53327743719008	0.17293716712445248	6				NaN	NaN	0	NaN	13051	4160	17211
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17214	43.05	NaN	5713.1	30	0	874.19	0.106	+			1019	AEKLGFAGL	9	63	453.2575523266876	904.5005517201752	2	453.25811767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEKLGFAGL_	ENSG00000150753|ENST00000280326|CCT5;ENST00000423695.6_1_5:10250480-10261980:+|nuORF;nc|ENSG00000150753|P48643-2|CCT5	104.0567914643314	0.03506238181059741	6				NaN	NaN	0	NaN	13052	4160	17211
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17215	43.052	NaN	2604.3	30	0	343.05	0.106				-1	ETFNTKNC	8	65	507.22289824405016	1012.4312435549003	2	507.2236633300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_ETFNTKNC(Carbamidomethyl (C))_	ENSG00000134539|ENST00000336164|KLRD1;ENST00000539374.1_1_12:10464095-10467389:+|nuORF;ENST00000543420.5_1_12:10464095-10467389:+|nuORF;nc|ENSG00000134539|Q13241-2|KLRD1;nc|ENSG00000134539|Q13241-3|KLRD1	35.61828744233558	0.6843154725607303	6				NaN	NaN	0	NaN	13053	4160	17211
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17216	43.054	NaN	1678	30	0	108.75	0.106				-1	 	0	57	413.2377328335942	824.4609127339884	2	413.2379455566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13054	4160	17211
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17217	43.056	NaN	3770.2	30	0	362.36	0.033	+			29307	NYNGVLSI	8	59	440.2317199707031	NaN	0	440.2317199707031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NYNGVLSI_	ENSG00000091137|ENST00000644269|SLC26A4	63.30626980617807	1.7418937515398478	6				NaN	NaN	0	NaN	13055	4160	17211
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17218	43.056	NaN	1195	30	0	82.043	0.143				-1	MPVGPDAILRY	11	58	624.3269434231122	NaN	0	624.32666015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_M(Oxidation (M))PVGPDAILRY_	ENSG00000204463|ENST00000676615|BAG6;nc|ENSG00000204463|P46379-2|BAG6;nc|ENSG00000204463|P46379-4|BAG6;nc|ENSG00000204463|P46379-5|BAG6;nc|ENSG00000204463|P46379|BAG6	30.317721548370564	0.4303027717346894	6				NaN	NaN	0	NaN	13056	4160	17211
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17234	43.091	NaN	9967.4	30	0	1887.9	0.214	+			48087	VSSWLPLAK	9	64	500.7943621626981	999.5741713921963	2	500.7948303222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSSWLPLAK_	ENSG00000103591|ENST00000261880|AAGAB;ENST00000558725.5_1_15:67519241-67546969:-|nuORF	101.60071028292904	0.0375685401170269	6				NaN	NaN	0	NaN	13069	4163	17233
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17235	43.094	NaN	8537	30	0	1812.2	0.106			+	2147	ALLGGLLIK	9	64	449.3096600086109	896.6047670840218	2	449.3100280761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ALLGGLLIK_	REV__ENST00000455785.6_1_1:26226635-26226746:-|nuORF	101.21157088398209	0.03796561369277615	6				NaN	NaN	0	NaN	13070	4163	17233
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17236	43.096	NaN	3837.7	30	0	773.64	0.106				-1	ISLSSCDLT	9	58	498.23712248020684	994.4596920272137	2	498.23712158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_ISLSSC(Carbamidomethyl (C))DLT_	ENST00000490838.6_1_20:3190141-3193989:+|nuORF	71.29570347882199	0.13518600952103718	6				NaN	NaN	0	NaN	13071	4163	17233
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17237	43.098	NaN	2171.7	30	0	196.57	0.106	+			4711	ATLTVMVI	8	49	432.2482732024074	862.4819934716148	2	432.2489318847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_ATLTVM(Oxidation (M))VI_	DCHS1|p.G2765Rfs*10|1|0.26|ENSG00000166341|chr11:6623383-6623384|-/T|frameshift_variant;DCHS1|p.H2834Sfs*7|1|0.44|ENSG00000166341|chr11:6623177-6623178|-/C|frameshift_variant;ENSG00000166341|ENST00000299441|DCHS1	119.22118168366049	0.23566888071072137	6				NaN	NaN	0	NaN	13072	4163	17233
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17238	43.1	NaN	1996.3	30	0	179.37	0.106	+			1462	AFGKRKESF	9	66	535.2921752929688	NaN	0	535.2921752929688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AFGKRKESF_	ENST00000470032.1_1_5:142416808-142421143:+|nuORF	40.77816245573522	0.2702456086868081	6				NaN	NaN	0	NaN	13073	4163	17233
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17239	43.102	NaN	1542.8	30	0	155.76	0.036				-1	YMAAVVNANM	10	59	558.2478561844894	1114.4811594357786	2	558.2484741210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Oxidation (M)	_YM(Oxidation (M))AAVVNANM(Oxidation (M))_	ENSG00000130939|ENST00000343090|UBE4B;ENST00000466379.1_1_1:10189503-10195243:+|nuORF;nc|ENSG00000130939|O95155-2|UBE4B;nc|ENSG00000130939|O95155-3|UBE4B;nc|ENSG00000130939|O95155-4|UBE4B;UBE4B|p.F894Lfs*19|1|0.23|ENSG00000130939|chr1:10149269-10149269|T/-|frameshift_variant;UBE4B|p.L1117Ffs*8|1|0.36|ENSG00000130939|chr1:10171152-10171153|-/T|frameshift_variant	30.503639358989545	0.6307262373768582	6				NaN	NaN	0	NaN	13074	4163	17233
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17252	43.129	NaN	10518	30	0	1860.8	0.214	+			42460	TAMDVVYALK	10	75	555.7963653997899	1109.5781778663797	2	555.79736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAMDVVYALK_	ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2	112.10723106719422	0.0417416748461292	6				NaN	NaN	0	NaN	13084	4166	17251
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17253	43.133	NaN	3210.8	30	0	301.79	0.106				-1	YVWRALCMT	9	66	600.2889250623906	1198.5632971915811	2	600.2909545898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_YVWRALC(Carbamidomethyl (C))MT_	ENSG00000073146|ENST00000262794|MOV10L1;nc|ENSG00000073146|Q9BXT6-4|MOV10L1;nc|ENSG00000073146|Q9BXT6-5|MOV10L1	31.954861631926434	0.5046124803899898	6				NaN	NaN	0	NaN	13085	4166	17251
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17254	43.135	NaN	5364	30	0	706	0.106	+			2548	AQAQEVFFLK	10	69	590.8215253279001	1179.6284977226	2	591.3234252929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AQAQEVFFLK_	ENSG00000170248|ENST00000307296|PDCD6IP;ENST00000459659.1_1_3:33863478-33868168:+|nuORF;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP;nc|ENSG00000170248|Q8WUM4-3|PDCD6IP;PDCD6IP|p.F351Nfs*37|1|0.08|ENSG00000170248|chr3:33836259-33836260|-/AATCC|frameshift_variant	68.62578634547417	0.2885473079336931	6				NaN	NaN	0	NaN	13086	4166	17251
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17255	43.136	NaN	6308.8	30	0	731.24	0.106	+			50806	YEQNKLSL	8	67	497.7638899139615	993.5132268947231	2	497.763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YEQNKLSL_	ENSG00000142207|ENST00000382751|URB1	98.62937762414208	0.25143494708580966	6				NaN	NaN	0	NaN	13087	4166	17251
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17256	43.138	NaN	2682.4	30	0	539.71	0.106	+			30639	QASTVVTYVY	10	60	565.7898118780764	1129.5650708229527	2	565.7907104492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QASTVVTYVY_	ENSG00000111237|ENST00000549578|VPS29;nc|ENSG00000111237|Q9UBQ0-2|VPS29	70.8162118820467	0.27065172005956	6				NaN	NaN	0	NaN	13088	4166	17251
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17257	43.14	NaN	2309	30	0	233.68	0.036	+			51308	YSFFMPAAK	9	65	531.260196952982	1060.505840972764	2	531.7626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YSFFMPAAK_	ENSG00000130985|ENST00000335972|UBA1;nc|ENSG00000130985|P22314-2|UBA1	66.42927471994793	0.16001998865088202	6				NaN	NaN	0	NaN	13089	4166	17251
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17271	43.17	NaN	2436.9	30	0	379.06	0.214			+	207	AALLIPVVK	9	58	462.317592847685	922.62063276217	2	462.31793212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AALLIPVVK_	REV__ENSG00000185518|ENST00000394232|SV2B;REV__nc|ENSG00000185518|Q7L1I2-2|SV2B	42.47446043378293	0.39123495718708534	6				NaN	NaN	0	NaN	13100	4169	17270
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17272	43.173	NaN	1810	30	0	168.52	0.034	+			41496	SVPGILPSY	9	56	466.758527210835	NaN	0	466.7578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVPGILPSY_	ENSG00000164080|ENST00000684192|RAD54L2;ENST00000461680.1_1_3:51673299-51697433:+|nuORF;ENST00000487093.5_1_3:51669772-51697433:+|nuORF	45.9519527083369	0.2345902329052062	6				NaN	NaN	0	NaN	13101	4169	17270
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17284	43.199	NaN	7082.5	30	0	1670.4	0.214	+			15550	GVFEYFNAK	9	68	537.7663993443119	1073.5182457554238	2	537.7671508789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVFEYFNAK_	ENSG00000102699|ENST00000381989|PARP4	85.16082228582465	0.07850854922700509	6				NaN	NaN	0	NaN	13110	4172	17283
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17285	43.203	NaN	2389.8	30	0	405.72	0.106	+			49506	VWEPPIIDGG	10	64	541.7791562789165	1081.543759624633	2	541.7788696289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VWEPPIIDGG_	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42|TTN;TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;TTN|p.K26626Nfs*34|1|0.34|ENSG00000155657|chr2:178561331-178561331|T/-|frameshift_variant;TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant;TTN|p.V27442Cfs*4|1|0.05|ENSG00000155657|chr2:178558107-178558108|-/A|frameshift_variant	35.61828744233558	0.588957954432594	6				NaN	NaN	0	NaN	13111	4172	17283
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17286	43.205	NaN	1494.9	30	0	182.18	0.106			+	12214	GARLANHRI	9	54	504.29802249608576	NaN	0	504.2966003417969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GARLANHRI_	REV__BAZ1B|p.A1298Cfs*10|1|0.16|ENSG00000009954|chr7:73444083-73444084|-/G|frameshift_variant;REV__BAZ1B|p.E800Kfs*16|1|0.08|ENSG00000009954|chr7:73477067-73477067|C/-|frameshift_variant;REV__ENSG00000009954|ENST00000339594|BAZ1B;REV__nc|ENSG00000009954|Q9UIG0-2|BAZ1B	37.15910966729921	0.2899585034171616	6				NaN	NaN	0	NaN	13112	4172	17283
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17287	43.206	NaN	1229.5	30	0	125.27	0.034	+			41512	SVPQSLMSI	9	49	481.2544784321252	NaN	0	481.25494384765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVPQSLMSI_	ENST00000318596.7_1_19:19222158-19222392:+|nuORF	39.252832667884924	0.27938773122138094	6				NaN	NaN	0	NaN	13113	4172	17283
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17296	43.228	NaN	4068.1	30	0	968.65	0.214	+			46669	VGGILTKPAS	10	56	471.7844177322609	941.5542825313219	2	471.78424072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VGGILTKPAS_	ENSG00000174607|ENST00000310836|UGT8	42.396135135203025	0.5270658956260207	6				NaN	NaN	0	NaN	13119	4175	17295
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17297	43.232	NaN	1901.5	30	0	193.83	0.106				-1	 	0	60	544.2593013291533	1086.5040497251066	2	544.2610473632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13120	4175	17295
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17298	43.233	NaN	3010.8	30	0	296	0.035				-1	 	0	63	493.8050717218218	985.5955905104436	2	493.80615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13121	4175	17295
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17307	43.255	NaN	1474.9	30	0	104.87	0.214	+			38763	SSLSLVEIYK	10	61	569.8224368491527	NaN	0	569.8223876953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSLSLVEIYK_	ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP	37.50817390946774	0.3770175549877019	6				NaN	NaN	0	NaN	13127	4178	17306
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17308	43.259	NaN	2183	30	0	123.01	0.049				-1	 	0	77	737.7104599713577	2210.109550514273	3	738.0419311523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13128	4178	17306
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17315	43.277	NaN	3742.4	30	0	466.93	0.144	+			6042	AVMGAYVLLK	10	56	532.8115671363878	1063.6085813395755	2	532.8135375976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVMGAYVLLK_	ENSG00000166562|ENST00000587834|SEC11C;ENST00000591406.1_1_18:56822908-56825914:+|nuORF	90.77665401227738	0.12662738171778068	6				NaN	NaN	0	NaN	13132	4181	17314
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17323	43.297	NaN	2761.9	30	0	119.85	0.214				-1	 	0	62	391.22485572118643	780.4351585091729	2	391.225341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13137	4184	17322
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17324	43.301	NaN	1996.7	30	0	319.33	0.106			+	-1	LVILCSPQQA	10	65	564.809602680222	1127.604652427244	2	564.81103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LVILC(Carbamidomethyl (C))SPQQA_	REV__ENST00000541960.5_1_12:10366379-10366556:+|nuORF	56.72105179125745	0.3956618550748046	6				NaN	NaN	0	NaN	13138	4184	17322
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17325	43.303	NaN	1586.8	30	0	175.13	0.035			+	51497	YVMHIAMN	8	59	489.73175048828125	NaN	0	489.73175048828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YVMHIAMN_	REV__ENSG00000075884|ENST00000295095|ARHGAP15;REV__ENST00000549060.1_1_2:144464133-144525738:+|nuORF	37.028477286268924	1.7418937515398478	6				NaN	NaN	0	NaN	13139	4184	17322
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17333	43.322	NaN	3465	30	0	393.44	0.143	+			1890	AIMDPLPLR	9	67	513.2934525733223	1024.5723522134444	2	513.2945556640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AIMDPLPLR_	AHR|p.D549Vfs*28|1|0.18|ENSG00000106546|chr7:17339471-17339474|ATTT/-|frameshift_variant;AHR|p.F562Sfs*16|1|0.24|ENSG00000106546|chr7:17339506-17339506|T/-|frameshift_variant;ENSG00000106546|ENST00000242057|AHR	74.25504064058377	0.12238981753128622	6				NaN	NaN	0	NaN	13144	4187	17332
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17341	43.343	NaN	3546.2	30	0	233.04	0.215				-1	 	0	69	369.21164815012617	736.4087433670524	2	369.2117614746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13149	4190	17340
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17342	43.346	NaN	9521.1	30	0	2007.5	0.106				-1	 	0	69	511.29941925504573	1020.5842855768915	2	511.3001403808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13150	4190	17340
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17343	43.348	NaN	2303.9	30	0	583.08	0.106	+			29098	NTMTLGDIVFK	11	63	627.8230218604882	1253.6314907877763	2	627.8234252929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_NTM(Oxidation (M))TLGDIVFK_	ENSG00000163586|ENST00000295834|FABP1;nc|ENSG00000170325|Q9NQV6-6|PRDM10	102.0615471778698	0.05642515548841253	6				NaN	NaN	0	NaN	13151	4190	17340
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17344	43.35	NaN	1817.1	30	0	201.98	0.106			+	49881	VYTLAKLGL	9	62	489.3044518760932	976.5943508189864	2	489.30450439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VYTLAKLGL_	REV__ENSG00000081014|ENST00000261842|AP4E1;REV__ENST00000558439.5_1_15:51226794-51242057:+|nuORF;REV__nc|ENSG00000081014|Q9UPM8-2|AP4E1	47.657333605630114	0.33044192980041115	6				NaN	NaN	0	NaN	13152	4190	17340
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17345	43.352	NaN	2227.4	30	0	287.6	0.035			+	47534	VQTAAFHVY	9	66	518.2663651227979	1034.5181773123957	2	518.2671508789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VQTAAFHVY_	REV__ENSG00000197323|ENST00000358465|TRIM33;REV__nc|ENSG00000197323|Q9UPN9-2|TRIM33;REV__TRIM33|p.L700Efs*5|1|0.07|ENSG00000197323|chr1:114410281-114410282|-/CAGAATTCTCC|frameshift_variant;REV__TRIM33|p.Q382Tfs*20|1|0.12|ENSG00000197323|chr1:114430809-114430810|-/T|frameshift_variant	31.954861631926434	0.5046124803899898	6				NaN	NaN	0	NaN	13153	4190	17340
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17364	43.398	NaN	2430.5	30	0	187.15	0.214				-1	 	0	62	413.2377328335942	824.4609127339884	2	413.2380065917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13166	4196	17363
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17365	43.401	NaN	2611.4	30	0	361.5	0.106	+			13761	GQFFSNSSI	9	54	493.7320963404418	985.4496397476836	2	493.73223876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GQFFSNSSI_	ENSG00000157765|ENST00000382051|SLC34A2;nc|ENSG00000157765|O95436-2|SLC34A2	56.43379154798735	0.2433427591689151	6				NaN	NaN	0	NaN	13167	4196	17363
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17366	43.403	NaN	1222.5	30	0	125.32	0.106	+			31212	QGRTYTLIYRR	11	51	476.26735018180574	NaN	0	476.26763916015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QGRTYTLIYRR_	nc|ENSG00000154358|Q5VST9-2|OBSCN;nc|ENSG00000154358|Q5VST9-3|OBSCN;nc|ENSG00000154358|Q5VST9-5|OBSCN;nc|ENSG00000154358|Q5VST9-6|OBSCN;nc|ENSG00000154358|Q5VST9|OBSCN	53.59686742100583	0.28948468610734834	6				NaN	NaN	0	NaN	13168	4196	17363
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17367	43.405	NaN	3774.4	30	0	503.5	0.106	+			5733	AVFQQLFQK	9	70	554.8105839311145	1107.6066149290289	2	555.3145141601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVFQQLFQK_	ENSG00000127831|ENST00000248444|VIL1;nc|ENSG00000127831|P09327-2|VIL1	93.1432384553994	0.056003526918089595	6				NaN	NaN	0	NaN	13169	4196	17363
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17368	43.407	NaN	1095.3	30	0	170.02	0.106	+			10512	EVVPKEPAL	9	51	491.2842792752884	NaN	0	491.28387451171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EVVPKEPAL_	ENSG00000149177|ENST00000418331|PTPRJ;nc|ENSG00000149177|Q12913-3|PTPRJ	26.69291269510374	0.34280015626154364	6				NaN	NaN	0	NaN	13170	4196	17363
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17369	43.409	NaN	1599	30	0	220.5	0.106			+	19013	IVYGAAPSLL	10	54	502.2946241352962	NaN	0	502.2943420410156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IVYGAAPSLL_	REV__ENSG00000175874|ENST00000324768|CREG2;REV__ENST00000486966.1_1_2:101999472-102003919:-|nuORF	37.15910966729921	0.3781637092648983	6				NaN	NaN	0	NaN	13171	4196	17363
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17370	43.411	NaN	1116.1	30	0	163.16	0.033			+	13463	GLKNPVPI	8	30	419.26262938908167	836.5107058449634	2	419.2627868652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GLKNPVPI_	REV__ENSG00000075218|ENST00000454366|GTSE1;REV__GTSE1|p.L312P|1|0.21|ENSG00000075218|chr22:46313897-46313897|T/C|missense_variant	20.481830146152948	0.8005983782650069	6				NaN	NaN	0	NaN	13172	4196	17363
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17381	43.436	NaN	1467.5	30	0	172.89	0.145			+	-1	VKFIANQMY	9	51	565.2883569202716	1128.562160907343	2	565.2890014648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_VKFIANQM(Oxidation (M))Y_	REV__tr|U7SQS9|U7SQS9_FUSNUsite-specificDNA-methyltransferase(adenine-specific)OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01567PE=4SV=1	31.954861631926434	0.5046124803899898	6				NaN	NaN	0	NaN	13180	4199	17380
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17392	43.462	NaN	830.36	30	0	68.334	0.138				-1	 	0	38	333.2008216363738	664.3870903395476	2	333.2014465332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13188	4202	17391
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17400	43.482	NaN	2864.7	30	0	360.52	0.213			+	13845	GQTPFMRFCI	10	71	600.2889250623906	1198.5632971915811	2	600.2909545898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GQTPFMRFCI_	REV__ENSG00000108773|ENST00000225916|KAT2A;REV__nc|ENSG00000108773|Q92830-2|KAT2A	26.69291269510374	0.6618461711292317	6				NaN	NaN	0	NaN	13193	4205	17399
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17401	43.485	NaN	2150.9	30	0	108.05	0.106			+	13918	GRMDIIVTF	9	62	526.2832537956551	1050.5519546581102	2	526.7864379882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GRMDIIVTF_	REV__ENSG00000160145|ENST00000682506|KALRN;REV__KALRN|p.D854Tfs*33|1|0.3|ENSG00000160145|chr3:124422830-124422830|A/-|frameshift_variant;REV__KALRN|p.T114Rfs*55|1|0.17|ENSG00000160145|chr3:124264577-124264577|A/-|frameshift_variant;REV__nc|ENSG00000160145|O60229-2|KALRN;REV__nc|ENSG00000160145|O60229|KALRN	71.29570347882199	0.13518600952103718	6				NaN	NaN	0	NaN	13194	4205	17399
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17402	43.487	NaN	1699.8	30	0	230.1	0.034			+	9526	ELANHHAR	8	55	474.2446043731413	946.4746558130827	2	474.2447509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ELANHHAR_	REV__ENSG00000125952|ENST00000358664|MAX;REV__ENST00000553951.1_1_14:65544523-65568380:-|nuORF;REV__ENST00000556702.1_1_14:65560332-65569057:-|nuORF;REV__ENST00000557277.5_2_14:65544132-65569310:-|nuORF;REV__MAX|p.L111Tfs*35|1|0.02|ENSG00000125952|chr14:65076629-65076630|-/C|frameshift_variant;REV__nc|ENSG00000125952|P61244-2|MAX;REV__nc|ENSG00000125952|P61244-3|MAX;REV__nc|ENSG00000125952|P61244-4|MAX;REV__nc|ENSG00000125952|P61244-5|MAX;REV__nc|ENSG00000125952|P61244-6|MAX	40.5726180659479	0.6527593143185008	6				NaN	NaN	0	NaN	13195	4205	17399
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17411	43.509	NaN	17894	30	0	3362.5	0.215	+			50301	WSLYDAVLK	9	75	547.7979470245449	1093.5813411158897	2	547.7998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WSLYDAVLK_	ENSG00000140598|ENST00000268206|EFL1;nc|ENSG00000140598|Q7Z2Z2-2|EFL1	71.29570347882199	0.13518600952103718	6				NaN	NaN	0	NaN	13201	4208	17410
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17412	43.512	NaN	2523.9	30	0	207.08	0.106			+	26172	LSREPGFVF	9	70	526.2832537956551	1050.5519546581102	2	526.284423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSREPGFVF_	REV__ENSG00000198198|ENST00000634258|SZT2;REV__nc|ENSG00000198198|Q5T011-5|SZT2;REV__SZT2|p.P2844Rfs*9|1|0.34|ENSG00000198198|chr1:43443669-43443669|C/-|frameshift_variant;REV__SZT2|p.R3241Afs*11|1|0.33|ENSG00000198198|chr1:43448401-43448401|G/-|frameshift_variant	68.484700416344	0.1473408039581241	6				NaN	NaN	0	NaN	13202	4208	17410
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17413	43.514	NaN	2476.9	30	0	227.65	0.106			+	4451	ATILGKREE	9	63	508.79172130794996	1015.5688896826999	2	508.79241943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATILGKREE_	REV__ENSG00000139629|ENST00000356317|GALNT6;REV__GALNT6|p.K520Sfs*79|1|0.33|ENSG00000139629|chr12:51357394-51357394|C/-|frameshift_variant	54.722347961057174	0.257609425301511	6				NaN	NaN	0	NaN	13203	4208	17410
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17414	43.516	NaN	3053.1	30	0	360.05	0.035			+	11794	FSQGGLKQGL	10	67	517.7852634933714	NaN	0	517.7855834960938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FSQGGLKQGL_	REV__ENSG00000174206|ENST00000398055|KICS2	45.908116695636124	0.331471961372572	6				NaN	NaN	0	NaN	13204	4208	17410
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17425	43.541	NaN	3688.7	30	0	468.05	0.214			+	33574	RLKKGCPAY	9	66	518.2924422847216	1034.570331636243	2	518.292236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RLKKGCPAY_	REV__ENSG00000123636|ENST00000392783|BAZ2B;REV__ENST00000472953.1_1_2:160261332-160289886:-|nuORF;REV__nc|ENSG00000226266|Q9UIF8-2|BAZ2B;REV__nc|ENSG00000226266|Q9UIF8-3|BAZ2B;REV__nc|ENSG00000226266|Q9UIF8-4|BAZ2B;REV__nc|ENSG00000226266|Q9UIF8-5|BAZ2B	33.51558372728122	0.4900267029546261	6				NaN	NaN	0	NaN	13212	4211	17424
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17426	43.545	NaN	1057.3	30	0	81.846	0.106			+	24270	LEVLKDVL	8	47	464.7884345490579	927.5623161649158	2	464.78900146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LEVLKDVL_	REV__tr|U7SNP7|U7SNP7_FUSNUDNA-directedDNApolymeraseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01977PE=4SV=1	76.7741389293348	0.3504530765139327	6				NaN	NaN	0	NaN	13213	4211	17424
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17427	43.547	NaN	3350.7	30	0	388.4	0.036	+			42154	SYSMIVNNL	9	60	528.7546575619596	1055.494762190719	2	528.7551879882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_SYSM(Oxidation (M))IVNNL_	CACYBP|p.V145Sfs*22|1|0.25|ENSG00000116161|chr1:175007191-175007191|A/-|frameshift_variant;ENSG00000116161|ENST00000367679|CACYBP;ENST00000469173.1_1_1:174976108-174977843:+|nuORF;ENST00000473925.1_1_1:174969094-174977843:+|nuORF;nc|ENSG00000116161|Q9HB71-3|CACYBP	96.19043198914106	0.047412499214244314	6				NaN	NaN	0	NaN	13214	4211	17424
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17439	43.572	NaN	3091.9	30	0	432.42	0.214			+	16075	HCFSVFVKL	9	63	540.2891943470122	1078.5638357608243	2	540.2901000976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HCFSVFVKL_	REV__RECK|p.K442Nfs*27|1|0.1|ENSG00000122707|chr9:36102116-36102116|A/-|frameshift_variant	79.45101966838831	0.09992237243120712	6				NaN	NaN	0	NaN	13223	4214	17438
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17440	43.576	NaN	2122	30	0	344.63	0.106			+	-1	DMPVDGMPVAL	11	49	387.51706218380093	NaN	0	387.5171203613281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_DM(Oxidation (M))PVDGMPVAL_	REV__ENST00000306399.3_1_3:185686359-185697623:+|nuORF;REV__ENST00000416764.5_1_3:185686359-185693154:+|nuORF	36.31764250033197	0.4035636655321173	6				NaN	NaN	0	NaN	13224	4214	17438
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17441	43.578	NaN	1405.4	30	0	100.29	0.106	+			46297	VEKEFEPLL	9	66	552.3022725285274	1102.5899921238547	2	552.30322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VEKEFEPLL_	ENSG00000166598|ENST00000299767|HSP90B1;ENST00000415545.2_1_1:92108345-92109332:+|nuORF;ENST00000551983.1_1_12:104335630-104337190:+|nuORF	51.19269402634007	0.2889735674168909	6				NaN	NaN	0	NaN	13225	4214	17438
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17442	43.58	NaN	2236.5	30	0	422.28	0.106	+			47467	VQAFFDLI	8	53	476.7611670182838	951.5077811033676	2	476.7616271972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VQAFFDLI_	PGAP1|p.R297Q|1|0.31|ENSG00000197121|chr2:196897168-196897168|C/T|missense_variant	38.80614096846853	0.6637206697844082	6				NaN	NaN	0	NaN	13226	4214	17438
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17443	43.582	NaN	2025	30	0	299.07	0.106			+	19573	KCVCLHFGLG	10	71	538.7734144040685	1075.5322758749369	2	538.7726440429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KCVCLHFGLG_	REV__ENST00000544665.7_1_16:31343047-31343377:+|nuORF	45.9519527083369	0.4943008177357963	6				NaN	NaN	0	NaN	13227	4214	17438
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17444	43.583	NaN	1279.7	30	0	160	0.034			+	9722	EMSPCAII	8	43	468.713908263691	NaN	0	468.7140808105469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),Oxidation (M)	_EM(Oxidation (M))SPC(Carbamidomethyl (C))AII_	REV__ENSG00000136152|ENST00000349995|COG3;REV__ENST00000486940.2_1_13:46090326-46105393:+|nuORF	44.53106598305862	1.7418937515398478	6				NaN	NaN	0	NaN	13228	4214	17438
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17445	43.584	NaN	1113.6	30	0	270.94	0.143			+	18380	IQYKPSIFDN	10	49	612.8177490234375	NaN	0	612.8177490234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IQYKPSIFDN_	REV__tr|U7SV33|U7SV33_FUSNUGlutathionereductaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01112PE=4SV=1	25.125986553469783	0.41767453237088564	6				NaN	NaN	0	NaN	13229	4214	17438
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17458	43.613	NaN	13079	30	0	3444.6	0.214				-1	VVLDNSEKCL	10	72	588.7998003706685	1175.585047808137	2	588.8004150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_VVLDNSEKC(Carbamidomethyl (C))L_	PRDM2|p.G1390Efs*14|1|0.21|ENSG00000116731|chr1:13781963-13781964|GG/-|frameshift_variant	58.22992032128504	0.38193887838457763	6				NaN	NaN	0	NaN	13239	4217	17457
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17459	43.617	NaN	1426.2	30	0	152.37	0.106	+			7690	DLIRGTVL	8	44	443.7706071521642	885.5266613711284	2	443.771240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DLIRGTVL_	ENSG00000174938|ENST00000617533|SEZ6L2;nc|ENSG00000174938|Q6UXD5-2|SEZ6L2;nc|ENSG00000174938|Q6UXD5-3|SEZ6L2;nc|ENSG00000174938|Q6UXD5-5|SEZ6L2;nc|ENSG00000174938|Q6UXD5-6|SEZ6L2;nc|ENSG00000174938|Q6UXD5|SEZ6L2	39.252832667884924	0.6609488554722044	6				NaN	NaN	0	NaN	13240	4217	17457
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17460	43.619	NaN	1501.8	30	0	922.15	0.106				-1	 	0	28	346.7067184204734	NaN	0	346.7068786621094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13241	4217	17457
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17461	43.621	NaN	1376.7	30	0	140.2	0.036				-1	TEDYVNKTM	9	66	558.7505419769126	NaN	0	558.7503051757812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_TEDYVNKTM(Oxidation (M))_	tr|U7SNJ4|U7SNJ4_FUSNUABMdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02011PE=4SV=1	23.04248740728303	0.3589936788096251	6				NaN	NaN	0	NaN	13242	4217	17457
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17473	43.646	NaN	15169	30	0	950.26	0.214	+			32732	RAPAPRGG	8	88	391.22485572118643	780.4351585091729	2	391.22491455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RAPAPRGG_	ENSG00000261308|ENST00000618634|FIGNL2	20.481830146152948	0.8005983782650069	6				NaN	NaN	0	NaN	13251	4220	17472
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17474	43.65	NaN	782.01	30	0	44.212	0.106	+			36809	SIEFQEPVP	9	29	349.17834870112824	NaN	0	349.1780700683594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SIEFQEPVP_	ENSG00000197323|ENST00000358465|TRIM33;nc|ENSG00000197323|Q9UPN9-2|TRIM33	25.450171626174864	0.34907449758287085	6				NaN	NaN	0	NaN	13252	4220	17472
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17475	43.652	NaN	1480.4	30	0	141.76	0.106			+	-1	YILAMTSCL	9	63	544.260438569327	1086.506324205454	2	544.2598876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_YILAM(Oxidation (M))TSC(Carbamidomethyl (C))L_	REV__ENSG00000168026|ENST00000683103|TTC21A;REV__ENST00000479954.5_1_3:39149250-39159704:+|nuORF;REV__ENST00000490036.5_1_3:39149250-39151755:+|nuORF;REV__nc|ENSG00000168026|Q8NDW8-5|TTC21A;REV__nc|ENSG00000168026|Q8NDW8-6|TTC21A;REV__nc|ENSG00000168026|Q8NDW8-7|TTC21A;REV__nc|ENSG00000168026|Q8NDW8|TTC21A;REV__TTC21A|p.L505Pfs*116|1|0.3|ENSG00000168026|chr3:39126352-39126353|-/C|frameshift_variant	42.47446043378293	0.39123495718708534	6				NaN	NaN	0	NaN	13253	4220	17472
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17476	43.653	NaN	1295	30	0	141.1	0.106	+			51487	YVIQQGAF	8	49	463.24249267578125	NaN	0	463.24249267578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YVIQQGAF_	ENSG00000184434|ENST00000380055|LRRC19;LRRC19|p.Q125Pfs*17|1|0.09|ENSG00000184434|chr9:26997949-26997950|-/TTATATG|frameshift_variant	44.53106598305862	1.7418937515398478	6				NaN	NaN	0	NaN	13254	4220	17472
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17477	43.655	NaN	1484.6	30	0	153.1	0.106			+	41926	SVVLGLSVLN	10	56	500.80508073593654	NaN	0	500.8052673339844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVVLGLSVLN_	REV__ENSG00000185947|ENST00000300870|ZNF267;REV__ENST00000566541.5_3_16:31886566-31901532:+|nuORF;REV__ZNF267|p.L310Sfs*2|1|0.08|ENSG00000185947|chr16:31915175-31915176|-/T|frameshift_variant	30.317721548370564	0.4006274431774794	6				NaN	NaN	0	NaN	13255	4220	17472
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17478	43.657	NaN	1336.1	30	0	107.3	0.035	+			33247	RGCDILIVY	9	63	526.2832537956551	1050.5519546581102	2	525.7847900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RGCDILIVY_	ENSG00000155629|ENST00000339364|PIK3AP1;PIK3AP1|p.P531Cfs*18|1|0.25|ENSG00000155629|chr10:96626785-96626786|GG/-|frameshift_variant;PIK3AP1|p.S562Kfs*34|1|0.4|ENSG00000155629|chr10:96623522-96623523|-/T|frameshift_variant	27.882242232435846	0.5426732730940306	6				NaN	NaN	0	NaN	13256	4220	17472
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17489	43.682	NaN	10503	30	0	1299.7	0.214	+			39229	STAIQELFK	9	67	518.7868414528587	1035.5591299725172	2	518.7877807617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STAIQELFK_	ENSG00000104833|ENST00000264071|TUBB4A;ENSG00000137267|ENST00000333628|TUBB2A;ENSG00000137285|ENST00000259818|TUBB2B;ENSG00000176014|ENST00000317702|TUBB6;ENSG00000188229|ENST00000340384|TUBB4B;ENSG00000196230|ENST00000327892|TUBB;ENSG00000258947|ENST00000315491|TUBB3;ENST00000417736.2_1_18:12308439-12326126:+|nuORF;ENST00000518096.1_1_8:30210219-30210855:+|nuORF;ENST00000604929.1_1_9:140136931-140138005:+|nuORF;nc|ENSG00000258947|Q13509-2|TUBB3	146.78539889680295	0.007618400906539062	6				NaN	NaN	0	NaN	13264	4223	17488
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17490	43.686	NaN	4996.3	30	0	516.28	0.106				-1	 	0	62	482.2966866046457	962.5788202760914	2	482.2971496582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13265	4223	17488
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17491	43.688	NaN	4417.8	30	0	926.49	0.106	+			7968	DSTFNVFVGK	10	68	557.2817301104001	1112.5489072876	2	557.2830200195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DSTFNVFVGK_	ENSG00000122642|ENST00000242209|FKBP9;ENST00000494374.5_1_7:32997059-33028356:+|nuORF;FKBP9|p.N129Ifs*10|7|0.31|ENSG00000122642|chr7:32975192-32975192|C/-|frameshift_variant;FKBP9|p.P380Lfs*6|1|0.38|ENSG00000122642|chr7:32996258-32996258|C/-|frameshift_variant;nc|ENSG00000122642|O95302-3|FKBP9	125.68205650279488	0.01930466848182481	6				NaN	NaN	0	NaN	13266	4223	17488
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17492	43.69	NaN	2128.8	30	0	158.63	0.106	+			11790	FSPFHASVL	9	67	502.76424691236184	NaN	0	502.7640380859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FSPFHASVL_	ENSG00000112357|ENST00000318471|PEX7	49.536043120802724	0.20989033510253738	6				NaN	NaN	0	NaN	13267	4223	17488
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17493	43.691	NaN	1033.6	30	0	71.263	0.106	+			39781	STKRGHAKSR	10	28	376.55150670927793	1126.6326907280338	3	376.5514221191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STKRGHAKSR_	ENSG00000171560|ENST00000403106|FGA;nc|ENSG00000171560|P02671|FGA	18.262085536374414	0.7236521404371882	6				NaN	NaN	0	NaN	13268	4223	17488
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17494	43.693	NaN	1522.5	30	0	132.93	0.106			+	23974	LDVGQKKL	8	53	450.77866321130017	899.5427734894004	2	450.7784729003906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LDVGQKKL_	REV__tr|U7SUL7|U7SUL7_FUSNUD-methioninetransportsystemsubstrate-bindingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01219PE=3SV=1	60.97194046774394	0.49215940876911696	6				NaN	NaN	0	NaN	13269	4223	17488
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17495	43.695	NaN	1215.3	30	0	126.41	0.037	+			24291	LEYQMRPLD	9	55	582.7884509112457	1163.5623488892913	2	582.7890014648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LEYQMRPLD_	AMER1|p.G660D|1|0.76|ENSG00000184675|chrX:64191308-64191308|C/T|missense_variant	25.57405402267927	0.5642445186134241	6				NaN	NaN	0	NaN	13270	4223	17488
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17506	43.72	NaN	2053.7	30	0	84.675	0.214				-1	 	0	57	369.21164815012617	736.4087433670524	2	369.2118225097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13278	4226	17505
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17507	43.724	NaN	3167.8	30	0	419.29	0.106	+			41317	SVLPYFVATK	10	65	562.8206489458239	1123.6267449584477	2	562.821533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVLPYFVATK_	ENSG00000149084|ENST00000278353|HSD17B12;ENST00000533090.6_2_11:43852474-43876795:+|nuORF;ENST00000533802.5_2_11:43855633-43876795:+|nuORF	45.02220120713402	0.5028680121232791	6				NaN	NaN	0	NaN	13279	4226	17505
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17508	43.726	NaN	5514.4	30	0	748.08	0.106	+			43048	TELEYIHAL	9	66	544.7839469979343	1087.5533410626686	2	544.785400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TELEYIHAL_	ENSG00000131558|ENST00000253861|EXOC4;ENST00000466000.1_1_7:133694942-133749278:+|nuORF	82.30502934623384	0.08758161712619916	6				NaN	NaN	0	NaN	13280	4226	17505
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17509	43.728	NaN	1103.3	30	0	74.167	0.106			+	51054	YLGLVAHKL	9	62	507.3120973803161	1012.6096418274323	2	507.3160400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YLGLVAHKL_	REV__ENSG00000168079|ENST00000354914|SCARA5;REV__nc|ENSG00000168079|Q6ZMJ2-2|SCARA5;REV__nc|ENSG00000168079|Q6ZMJ2-4|SCARA5	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	13281	4226	17505
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17510	43.729	NaN	1388.1	30	0	67.475	0.106	+			10550	EYAKTFGYTF	10	64	613.7901574709983	NaN	0	613.7905883789062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EYAKTFGYTF_	ENSG00000166783|ENST00000396368|MARF1;nc|ENSG00000166783|Q9Y4F3-3|MARF1;nc|ENSG00000166783|Q9Y4F3-4|MARF1;nc|ENSG00000166783|Q9Y4F3-5|MARF1	65.46538089061403	0.18964705739380194	6				NaN	NaN	0	NaN	13282	4226	17505
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17511	43.731	NaN	904.98	30	0	148.97	0.037	+			10911	FDGSVTFHHP	10	52	572.2664794921875	NaN	0	572.2664794921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FDGSVTFHHP_	ENSG00000141452|ENST00000269221|RMC1;ENST00000589215.5_1_18:21087981-21111645:+|nuORF	21.9598887501803	0.4201028297492154	6				NaN	NaN	0	NaN	13283	4226	17505
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17512	43.732	NaN	1315.1	30	0	471.84	0.14	+			14835	GTLLKAQIRHQ	11	47	422.2533264160156	NaN	0	422.2533264160156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GTLLKAQIRHQ_	ENSG00000146426|ENST00000682666|TIAM2;nc|ENSG00000146426|Q8IVF5-2|TIAM2;nc|ENSG00000146426|Q8IVF5-3|TIAM2;nc|ENSG00000146426|Q8IVF5-4|TIAM2;nc|ENSG00000146426|Q8IVF5-5|TIAM2	39.873155843976775	0.387718248623866	6				NaN	NaN	0	NaN	13284	4226	17505
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17520	43.752	NaN	5435.1	30	0	394.17	0.214				-1	 	0	74	413.2377328335942	824.4609127339884	2	413.23797607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13289	4229	17519
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17521	43.755	NaN	9027.1	30	0	1670	0.106	+			26732	LVLLNPEKY	9	73	544.8205576774587	1087.6265624217174	2	544.821533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LVLLNPEKY_	ADD1|p.K718Rfs*11|2|0.23|ENSG00000087274|chr4:2928458-2928458|A/-|frameshift_variant;ENSG00000087274|ENST00000683351|ADD1;ENST00000503169.5_1_4:2877642-2906862:+|nuORF;ENST00000508684.5_1_4:2900928-2901297:+|nuORF;ENST00000509039.5_1_4:2877642-2901297:+|nuORF;nc|ENSG00000087274|P35611-2|ADD1;nc|ENSG00000087274|P35611-3|ADD1;nc|ENSG00000087274|P35611-4|ADD1;nc|ENSG00000087274|P35611-5|ADD1;nc|ENSG00000087274|P35611-6|ADD1;nc|ENSG00000087274|P35611|ADD1	54.776311868738084	0.25715957988447635	6				NaN	NaN	0	NaN	13290	4229	17519
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17522	43.757	NaN	1064.8	30	0	349.26	0.106			+	13066	GFGFGAGG	8	36	335.15344814335714	668.2923433535143	2	335.1537780761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GFGFGAGG_	REV__CON__Q6IFZ6	10.184766708764876	0.7843118145031319	6				NaN	NaN	0	NaN	13291	4229	17519
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17523	43.759	NaN	982.07	30	0	187.18	0.106				-1	 	0	42	327.1641754752835	652.313798017367	2	327.1654052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13292	4229	17519
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17524	43.761	NaN	739.08	30	0	98.296	0.031				-1	SEPCIQGCH	9	41	344.14026087907695	NaN	0	344.1401672363281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_SEPC(Carbamidomethyl (C))IQGCH_	ENSG00000047936|ENST00000368507|ROS1;nc|ENSG00000047936|P08922|ROS1;ROS1|p.L1167*|1|0.19|ENSG00000047936|chr6:117359957-117359957|A/-|frameshift_variant;ROS1|p.L1167Ffs*26|1|0.27|ENSG00000047936|chr6:117359956-117359957|-/A|frameshift_variant;ROS1|p.N1247Mfs*14|1|0.11|ENSG00000047936|chr6:117357918-117357918|T/-|frameshift_variant;ROS1|p.N1821Tfs*2|1|0.44|ENSG00000047936|chr6:117326319-117326319|T/-|frameshift_variant;ROS1|p.Y363Lfs*25|1|0.38|ENSG00000047936|chr6:117394238-117394239|-/A|frameshift_variant	25.57405402267927	0.3484490411150625	6				NaN	NaN	0	NaN	13293	4229	17519
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17536	43.786	NaN	2745.9	30	0	320.48	0.214	+			19133	IYNASATSVF	10	68	536.7691495697139	NaN	0	536.7693481445312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IYNASATSVF_	ENSG00000127980|ENST00000248633|PEX1;ENST00000484913.5_1_7:92116773-92148321:-|nuORF;PEX1|p.R636Gfs*9|1|0.3|ENSG00000127980|chr7:92504897-92504897|T/-|frameshift_variant	83.6470233535746	0.08151478778011129	6				NaN	NaN	0	NaN	13302	4232	17535
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17537	43.79	NaN	1463	30	0	115.2	0.106	+			46711	VGLPPVPPSS	10	55	475.2707244384018	948.5268959436037	2	475.271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VGLPPVPPSS_	ENSG00000146147|ENST00000502396|MLIP;ENST00000511744.1_1_6:53976250-54068425:+|nuORF;MLIP|p.E348Rfs*6|1|0.27|ENSG00000146147|chr6:54202155-54202156|-/A|frameshift_variant;nc|ENSG00000146147|Q5VWP3-4|MLIP	30.503639358989545	0.6307262373768582	6				NaN	NaN	0	NaN	13303	4232	17535
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17538	43.792	NaN	1703.4	30	0	291.62	0.106	+			26791	LVSCKKDL	8	46	453.2595669885742	NaN	0	453.25958251953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LVSCKKDL_	ENSG00000182957|ENST00000382108|SPATA13;nc|ENSG00000228741|Q96N96-2|SPATA13;nc|ENSG00000228741|Q96N96-3|SPATA13;nc|ENSG00000228741|Q96N96-4|SPATA13;nc|ENSG00000228741|Q96N96-5|SPATA13;nc|ENSG00000228741|Q96N96|SPATA13	55.50420428727701	1.7418937515398478	6				NaN	NaN	0	NaN	13304	4232	17535
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17539	43.794	NaN	1724.9	30	0	228.43	0.106			+	33647	RMLVATLVE	9	59	516.2995200028791	1030.5844870725582	2	516.2996826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RMLVATLVE_	REV__ENSG00000167483|ENST00000599164|NIBAN3;REV__nc|ENSG00000167483|Q86XR2-2|NIBAN3;REV__nc|ENSG00000167483|Q86XR2-3|NIBAN3;REV__nc|ENSG00000167483|Q86XR2-4|NIBAN3;REV__nc|ENSG00000167483|Q86XR2-5|NIBAN3;REV__nc|ENSG00000167483|Q86XR2-7|NIBAN3;REV__nc|ENSG00000167483|Q86XR2|NIBAN3	44.116797842482775	0.37197099687881774	6				NaN	NaN	0	NaN	13305	4232	17535
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17540	43.796	NaN	1252.4	30	0	177.93	0.037			+	51057	YLIVLNCQAI	10	60	575.3179931640625	NaN	0	575.3179931640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YLIVLNCQAI_	REV__ENSG00000107201|ENST00000379883|RIGI;REV__nc|ENSG00000107201|O95786-2|RIGI	34.172542307311794	0.38797011891751465	6				NaN	NaN	0	NaN	13306	4232	17535
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17553	43.823	NaN	4964.7	30	0	1314.2	0.214	+			31822	QPQQTFNIY	9	56	569.779528121163	1137.544503309126	2	569.7803344726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QPQQTFNIY_	ENSG00000010327|ENST00000321725|STAB1;ENST00000481607.1_1_3:52529402-52542549:+|nuORF;nc|ENSG00000010327|Q9NY15-2|STAB1;STAB1|p.E1712Rfs*8|1|0.12|ENSG00000010327|chr3:52519356-52519357|-/C|frameshift_variant;STAB1|p.F2001Lfs*111|1|0.35|ENSG00000010327|chr3:52521452-52521452|T/-|frameshift_variant;STAB1|p.G1507Afs*84|1|0.26|ENSG00000010327|chr3:52517346-52517346|G/-|frameshift_variant;STAB1|p.L1057Sfs*33|1|0.28|ENSG00000010327|chr3:52513135-52513136|-/T|frameshift_variant;STAB1|p.P978Lfs*57|1|0.35|ENSG00000010327|chr3:52512385-52512385|C/-|frameshift_variant;STAB1|p.R1122Pfs*37|1|0.37|ENSG00000010327|chr3:52513891-52513892|-/C|frameshift_variant;STAB1|p.V800Cfs*113|1|0.34|ENSG00000010327|chr3:52509914-52509914|G/-|frameshift_variant	71.87747018426188	0.13267044672804276	6				NaN	NaN	0	NaN	13316	4235	17552
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17554	43.826	NaN	1656.2	30	0	249.25	0.106			+	16646	HHSFTQTI	8	56	485.7394876163547	NaN	0	485.73944091796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HHSFTQTI_	REV__ENSG00000090273|ENST00000321265|NUDC	53.351449002276354	1.7418937515398478	6				NaN	NaN	0	NaN	13317	4235	17552
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17555	43.828	NaN	1279.8	30	0	78.476	0.106			+	-1	YSLFAACLLC	10	59	580.7769270830383	1159.5393012328766	2	580.7769165039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_YSLFAACLLC(Carbamidomethyl (C))_	REV__DNAH10|p.D3416Mfs*54|1|0.28|ENSG00000197653|chr12:123914871-123914871|C/-|frameshift_variant;REV__DNAH10|p.N3499Ifs*2|1|0.14|ENSG00000197653|chr12:123916578-123916578|A/-|frameshift_variant;REV__ENSG00000197653|ENST00000673944|DNAH10;REV__nc|ENSG00000197653|Q8IVF4|DNAH10	25.450171626174864	0.6719948968573018	6				NaN	NaN	0	NaN	13318	4235	17552
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17556	43.83	NaN	1969.8	30	0	140.32	0.106	+			7172	DAGLLLVVK	9	56	464.2969360196719	926.5793191061438	2	464.2968444824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DAGLLLVVK_	ENSG00000119457|ENST00000374228|SLC46A2;SLC46A2|p.L90Cfs*53|1|0.25|ENSG00000119457|chr9:112890414-112890414|G/-|frameshift_variant	74.25504064058377	0.12238981753128622	6				NaN	NaN	0	NaN	13319	4235	17552
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17557	43.832	NaN	1787.8	30	0	116.47	0.037	+			43094	TEPCPHISLQ	10	60	562.7735365121204	NaN	0	562.7734985351562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TEPCPHISLQ_	ENST00000373511.6_1_9:128200812-128200935:-|nuORF	42.86426827375447	0.3507156137006061	6				NaN	NaN	0	NaN	13320	4235	17552
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17569	43.858	NaN	3799.2	30	0	626.23	0.214	+			9904	EQPFLSVFK	9	61	547.7979470245449	1093.5813411158897	2	547.80029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EQPFLSVFK_	ENSG00000187583|ENST00000379410|PLEKHN1;nc|ENSG00000187583|Q494U1-2|PLEKHN1;nc|ENSG00000187583|Q494U1-3|PLEKHN1;PLEKHN1|p.P235Rfs*25|1|0.16|ENSG00000187583|chr1:970971-970971|G/-|frameshift_variant	36.446750945000026	0.4619375763483977	6				NaN	NaN	0	NaN	13329	4238	17568
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17570	43.861	NaN	3077.6	30	0	274.32	0.106				-1	 	0	72	600.2889250623906	1198.5632971915811	2	600.2905883789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13330	4238	17568
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17571	43.863	NaN	1910.4	30	0	293.63	0.106	+			8997	EFTKDIARC	9	60	541.7692752029218	1081.5239974726435	2	541.7713623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EFTKDIARC_	ENSG00000215883|ENST00000534324|CYB5RL;ENST00000490863.5_1_1:54640294-54649992:-|nuORF;ENST00000528287.5_1_1:54640294-54656520:-|nuORF;nc|ENSG00000256407|Q6IPT4-3|CYB5RL;nc|ENSG00000256407|Q6IPT4-4|CYB5RL	37.81151784470057	0.4459294069877048	6				NaN	NaN	0	NaN	13331	4238	17568
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17572	43.865	NaN	1230.4	30	0	112.04	0.106				-1	LQSCKDLQY	9	53	577.7781388861005	NaN	0	577.7786865234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_LQSC(Carbamidomethyl (C))KDLQY_	ENSG00000118246|ENST00000402774|FASTKD2;ENST00000487777.5_1_2:207631381-207653673:+|nuORF;nc|ENSG00000118246|Q9NYY8-2|FASTKD2	39.252832667884924	0.27938773122138094	6				NaN	NaN	0	NaN	13332	4238	17568
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17573	43.867	NaN	1056.7	30	0	162.46	0.034			+	-1	LVTMSFPF	8	43	479.2428439823723	NaN	0	479.2425231933594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_LVTM(Oxidation (M))SFPF_	REV__ENSG00000138347|ENST00000358913|MYPN;REV__MYPN|p.I891*|1|0.12|ENSG00000138347|chr10:68175423-68175423|A/-|frameshift_variant;REV__nc|ENSG00000138347|Q86TC9-2|MYPN	28.2542754592877	1.7418937515398478	6				NaN	NaN	0	NaN	13333	4238	17568
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17585	43.892	NaN	2803.2	30	0	318.82	0.214	+			10687	EYTLMRATF	9	63	566.2780106547009	1130.5414683762017	2	566.2787475585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EYTLMRATF_	ENSG00000185950|ENST00000375856|IRS2	124.08010499294276	0.018729767491916592	6				NaN	NaN	0	NaN	13342	4241	17584
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17586	43.896	NaN	3307.8	30	0	238.37	0.106			+	18805	ITTAMQPKY	9	73	526.7757909740229	1051.5370290148458	2	526.7772216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ITTAMQPKY_	REV__tr|U7SH87|U7SH87_FUSNUPenicillin-bindingprotein1AOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02222PE=4SV=1	54.776311868738084	0.25715957988447635	6				NaN	NaN	0	NaN	13343	4241	17584
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17587	43.898	NaN	3109.3	30	0	492.75	0.035			+	10810	FALRWEAL	8	55	503.2801889468656	1004.5458249605313	2	503.2813415527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FALRWEAL_	REV__ENST00000419025.1_1_3:183744680-183744779:-|nuORF	38.80614096846853	0.6637206697844082	6				NaN	NaN	0	NaN	13344	4241	17584
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17594	43.914	NaN	5375.9	30	0	486.86	0.214	+			28036	NAAKIFNLY	9	75	527.2895240667725	1052.564495200345	2	527.2905883789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAAKIFNLY_	DPYSL3|p.A516Qfs*15|1|0.31|ENSG00000113657|chr5:147395638-147395638|G/-|frameshift_variant;ENSG00000072832|ENST00000324989|CRMP1;ENSG00000113657|ENST00000343218|DPYSL3;ENSG00000147647|ENST00000351513|DPYS;ENST00000506216.5_1_4:5749932-5890196:-|nuORF;ENST00000511535.1_1_4:5823489-5889136:-|nuORF;nc|ENSG00000072832|Q14194|CRMP1;nc|ENSG00000113657|Q14195|DPYSL3	108.08749611321984	0.03094949498378333	6				NaN	NaN	0	NaN	13348	4244	17593
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17595	43.918	NaN	1840.8	30	0	130.28	0.106	+			35632	SCGGPGPN	8	50	344.63850641782557	687.2624599024512	2	344.6399230957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SCGGPGPN_	ENST00000396033.6_1_10:33246721-33246775:-|nuORF	19.359975847455235	0.7988239741663654	6				NaN	NaN	0	NaN	13349	4244	17593
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17596	43.92	NaN	2194.7	30	0	429.59	0.034	+			37446	SLIEQTTAL	9	59	488.27078876879114	974.5270246043823	2	488.2713928222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLIEQTTAL_	ENSG00000111790|ENST00000229395|FGFR1OP2;ENST00000395941.4_1_12:27107091-27110700:+|nuORF;nc|ENSG00000111790|Q9NVK5-2|FGFR1OP2;nc|ENSG00000111790|Q9NVK5-3|FGFR1OP2	77.31757898189308	0.1091473830098891	6				NaN	NaN	0	NaN	13350	4244	17593
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17606	43.941	NaN	2424.1	30	0	313.76	0.214	+			4185	ATFMEVLTK	9	61	520.2775034949198	1038.5404540566394	2	520.2794799804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATFMEVLTK_	ENSG00000196712|ENST00000358273|NF1;ENST00000493220.5_2_17:29556858-29657521:+|nuORF;ENST00000495910.6_1_17:29490228-29576996:+|nuORF;nc|ENSG00000196712|P21359-2|NF1;nc|ENSG00000196712|P21359-4|NF1;nc|ENSG00000196712|P21359-6|NF1;NF1|p.F2429Qfs*7|1|0.17|ENSG00000196712|chr17:31349214-31349215|-/CAAGTAAGAATTAATT|frameshift_variant;NF1|p.K1386Rfs*20|1|0.33|ENSG00000196712|chr17:31252978-31252978|A/-|frameshift_variant	66.96192283764107	0.15557981141143568	6				NaN	NaN	0	NaN	13357	4247	17605
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17607	43.945	NaN	1206.2	30	0	198.84	0.106			+	50032	WDSAARSGS	9	54	468.713908263691	NaN	0	468.7139587402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WDSAARSGS_	REV__ENST00000519313.5_1_5:150138178-150138235:-|nuORF	45.97224482568171	0.23445038899310136	6				NaN	NaN	0	NaN	13358	4247	17605
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17608	43.947	NaN	1156.7	30	0	130.54	0.034	+			45516	TYGWTANM	8	52	472.2017517089844	NaN	0	472.2017517089844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TYGWTANM_	ENSG00000080824|ENST00000216281|HSP90AA1;ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000378770.1_1_4:190394307-190396341:+|nuORF;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;ENST00000506915.1_1_4:190395906-190396341:+|nuORF;ENST00000518337.1_1_8:74128289-74128592:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000183199|Q58FF7|HSP90AB3P;nc|ENSG00000205100|Q58FG1|HSP90AA4P	24.20275056022122	1.7418937515398478	6				NaN	NaN	0	NaN	13359	4247	17605
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17619	43.971	NaN	2944.8	30	0	967.11	0.214	+			30824	QEELVKISL	9	60	529.8077269304036	1057.6009009276072	2	529.8090209960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QEELVKISL_	COL6A3|p.A2956Lfs*45|1|0.33|ENSG00000163359|chr2:237336234-237336234|C/-|frameshift_variant;COL6A3|p.A2957Lfs*44|1|0.33|ENSG00000163359|chr2:237336232-237336232|A/-|frameshift_variant;COL6A3|p.G1770Vfs*12|1|0.05|ENSG00000163359|chr2:237366878-237366879|-/TGGTGTAA|frameshift_variant;COL6A3|p.G2207Efs*35|1|0.22|ENSG00000163359|chr2:237354908-237354908|G/-|frameshift_variant;COL6A3|p.G3016Vfs*19|1|0.34|ENSG00000163359|chr2:237334810-237334810|G/-|frameshift_variant;COL6A3|p.P2319Qfs*12|1|0.06|ENSG00000163359|chr2:237348359-237348359|G/-|frameshift_variant;COL6A3|p.V1771Sfs*8|3|0.08|ENSG00000163359|chr2:237366876-237366876|C/-|frameshift_variant;ENSG00000163359|ENST00000295550|COL6A3;nc|ENSG00000163359|P12111-2|COL6A3;nc|ENSG00000163359|P12111-3|COL6A3;nc|ENSG00000163359|P12111-4|COL6A3;nc|ENSG00000163359|P12111-5|COL6A3	66.96192283764107	0.15557981141143568	6				NaN	NaN	0	NaN	13367	4250	17618
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17620	43.974	NaN	2023.8	30	0	616.55	0.106	+			30743	QDLLKEASCGL	11	57	588.7998003706685	1175.585047808137	2	589.3019409179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QDLLKEASCGL_	ENSG00000153404|ENST00000637938|PLEKHG4B;ENST00000504041.1_1_5:169407-179718:+|nuORF	40.05817265558897	0.5571470695993369	6				NaN	NaN	0	NaN	13368	4250	17618
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17621	43.976	NaN	3464.1	30	0	515.82	0.036			+	-1	MIWGLLSLK	9	72	538.8135939121564	NaN	0	538.812744140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))IWGLLSLK_	REV__ENST00000295087.12_1_2:152670822-152684722:-|nuORF;REV__ENST00000458140.6_1_2:152670822-152684917:-|nuORF	39.252832667884924	0.27938773122138094	6				NaN	NaN	0	NaN	13369	4250	17618
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17632	44	NaN	9804.4	30	0	628.91	0.214	+			13146	GGPARARP	8	87	391.22485572118643	780.4351585091729	2	391.22491455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GGPARARP_	ENST00000375190.8_1_19:3606541-3606769:-|nuORF	20.481830146152948	0.8005983782650069	6				NaN	NaN	0	NaN	13377	4253	17631
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17633	44.003	NaN	3878.4	30	0	1404.1	0.106	+			30871	QEKAFFAQL	9	66	541.2867684047321	1080.5589838762642	2	541.2886962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QEKAFFAQL_	ENSG00000116044|ENST00000397062|NFE2L2;ENST00000462023.1_1_2:178098693-178129304:-|nuORF;ENST00000477534.1_1_2:178098693-178128139:-|nuORF;nc|ENSG00000116044|Q16236-2|NFE2L2;nc|ENSG00000116044|Q16236-3|NFE2L2	88.17693792209575	0.07000514020414955	6				NaN	NaN	0	NaN	13378	4253	17631
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17634	44.005	NaN	1676	30	0	216.87	0.034	+			7164	DAFRSWAV	8	51	476.23741301374304	950.4602730942861	2	476.2375183105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DAFRSWAV_	ENSG00000007171|ENST00000313735|NOS2;nc|ENSG00000007171|P35228-2|NOS2;NOS2|p.Y709*|1|0.33|ENSG00000007171|chr17:27767745-27767745|G/-|frameshift_variant	34.172542307311794	0.6954784234644539	6				NaN	NaN	0	NaN	13379	4253	17631
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17643	44.025	NaN	1124	30	0	204.61	0.144	+			7388	DDYVGTFLEG	10	51	558.2503963044823	NaN	0	558.2486572265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DDYVGTFLEG_	ENSG00000132382|ENST00000254718|MYBBP1A;nc|ENSG00000132382|Q9BQG0-2|MYBBP1A	37.15910966729921	0.3781637092648983	6				NaN	NaN	0	NaN	13385	4256	17642
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17648	44.042	NaN	9161	30	0	905.33	0.215	+			11626	FQALEIDLQ	9	69	538.7841822350911	1075.553811536982	2	538.7852783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FQALEIDLQ_	CON__Q99PS0;CON__Q9C075;ENSG00000108244|ENST00000209718|KRT23;ENST00000582754.5_1_17:39081604-39092927:-|nuORF;nc|ENSG00000108244|Q9C075-2|KRT23	53.08895987439943	0.27122541748218487	6				NaN	NaN	0	NaN	13387	4259	17647
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17649	44.045	NaN	2575.6	30	0	407.07	0.106	+			7599	DIVTRVAE	8	55	451.75247320000267	901.4903934668054	2	451.7524719238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DIVTRVAE_	ENSG00000136816|ENST00000259339|TOR1B	82.24051045832904	0.30490469762271794	6				NaN	NaN	0	NaN	13388	4259	17647
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17650	44.047	NaN	2631.6	30	0	490.37	0.035	+			35095	SAFYVPFAK	9	56	515.2733841561421	1028.5322153790842	2	515.2737426757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAFYVPFAK_	ENSG00000118961|ENST00000237822|LDAH;nc|ENSG00000118961|Q9H6V9-2|LDAH	47.95952297671804	0.32689736945648856	6				NaN	NaN	0	NaN	13389	4259	17647
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17661	44.071	NaN	3046.1	30	0	536.46	0.143			+	-1	GTMLRSLVQ	9	59	510.77999732284326	1019.5454417124865	2	510.781005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_GTM(Oxidation (M))LRSLVQ_	REV__ENSG00000139718|ENST00000604567|SETD1B;REV__nc|ENSG00000139718|Q9UPS6-2|SETD1B;REV__SETD1B|p.A1222Hfs*53|1|0.21|ENSG00000139718|chr12:121819645-121819645|G/-|frameshift_variant;REV__SETD1B|p.L1532Ffs*35|1|0.12|ENSG00000139718|chr12:121823172-121823173|-/T|frameshift_variant;REV__SETD1B|p.Q1589Sfs*11|3|0.38|ENSG00000139718|chr12:121823338-121823338|C/-|frameshift_variant	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	13397	4262	17660
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17669	44.093	NaN	2844.1	30	0	190.98	0.214				-1	 	0	65	413.2377328335942	824.4609127339884	2	413.23785400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13402	4265	17668
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17670	44.096	NaN	1266	30	0	190.13	0.106	+			44535	TSWRVLIS	8	49	481.276792881835	NaN	0	481.2764587402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TSWRVLIS_	RAD54L|p.R319W|1|0.33|ENSG00000085999|chr1:46267522-46267522|C/T|missense_variant	31.954861631926434	1.7418937515398478	6				NaN	NaN	0	NaN	13403	4265	17668
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17671	44.098	NaN	1126.6	30	0	94.436	0.035				-1	KYHKLGII	8	50	507.3120973803161	1012.6096418274323	2	507.31475830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))KYHKLGII_	MLT1B_dup10208|chrX:2933389-2933588:+|1.275405936799411|0.1555601839560434|3.04|468.0|9|1|anti-sense	30.503639358989545	0.7238069182250283	6				NaN	NaN	0	NaN	13404	4265	17668
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17682	44.13	NaN	1632.6	30	0	242.84	0.214			+	-1	VGAAGCGG	8	48	324.6410182589791	647.2674835847582	2	324.6422424316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_VGAAGC(Carbamidomethyl (C))GG_	REV__ENST00000309575.4_1_3:142838724-142839039:+|nuORF	10.184766708764876	0.7843118145031319	6				NaN	NaN	0	NaN	13409	4271	17681
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17683	44.134	NaN	2168.4	30	0	396.38	0.106				-1	LEEAKQLY	8	62	518.2708085672858	1034.5270642013716	2	518.27197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LEEAKQLY_	ENSG00000068724|ENST00000319190|TTC7A;ENST00000409825.5_1_2:47184044-47301059:+|nuORF;ENST00000491786.5_1_2:47205894-47301059:+|nuORF;nc|ENSG00000068724|Q9ULT0-4|TTC7A;TTC7A|p.A771V|1|0.13|ENSG00000068724|chr2:47060928-47060928|C/T|missense_variant	30.503639358989545	0.7238069182250283	6				NaN	NaN	0	NaN	13410	4271	17681
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17684	44.136	NaN	538.19	30	0	66.74	0.106				-1	 	0	31	327.1641754752835	652.313798017367	2	327.1651306152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13411	4271	17681
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17685	44.138	NaN	1793.6	30	0	563.34	0.032			+	43767	TLGVAPLQ	8	33	399.73827895906936	NaN	0	399.7381896972656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TLGVAPLQ_	REV__ENSG00000145194|ENST00000404464|ECE2;REV__nc|ENSG00000145194|P0DPD6-3|ECE2;REV__nc|ENSG00000145194|P0DPD6|ECE2;REV__nc|ENSG00000284917|P0DPD8|EEF1AKMT4-ECE2	26.79610172149135	1.7418937515398478	6				NaN	NaN	0	NaN	13412	4271	17681
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17692	44.154	NaN	4752.7	30	0	489.62	0.214				-1	 	0	68	511.2539834668161	1020.4934140004323	2	511.25543212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13416	4274	17691
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17693	44.158	NaN	3715.1	30	0	369.75	0.106	+			29276	NYGRVFSEW	9	77	579.2715877599114	1156.5286225866228	2	579.7738037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NYGRVFSEW_	ENSG00000114520|ENST00000251775|SNX4;ENST00000471751.5_1_3:125166625-125239024:-|nuORF;ENST00000473417.5_1_3:125188296-125239016:-|nuORF;nc|ENSG00000114520|O95219-2|SNX4	127.46168284122857	0.016682644177004526	6				NaN	NaN	0	NaN	13417	4274	17691
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17694	44.16	NaN	1773.5	30	0	205.66	0.106	+			51422	YTVLFSAGL	9	50	485.7655262137971	NaN	0	485.76568603515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YTVLFSAGL_	USH2A|p.A99V|1|0.28|ENSG00000042781|chr1:216422041-216422041|G/A|missense_variant	29.14955571784316	0.3303970763161698	6				NaN	NaN	0	NaN	13418	4274	17691
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17695	44.161	NaN	1663.4	30	0	242.31	0.106			+	580	ADKKLGGFLT	10	62	525.3026914597073	1048.5908299862144	2	525.3028564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ADKKLGGFLT_	REV__ENSG00000054392|ENST00000261458|HHAT;REV__nc|ENSG00000054392|Q5VTY9-2|HHAT;REV__nc|ENSG00000054392|Q5VTY9-3|HHAT;REV__nc|ENSG00000054392|Q5VTY9-5|HHAT;REV__nc|ENSG00000054392|Q5VTY9-6|HHAT;REV__nc|ENSG00000054392|Q5VTY9-7|HHAT	42.86426827375447	0.522752283233888	6				NaN	NaN	0	NaN	13419	4274	17691
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17696	44.163	NaN	1358.6	30	0	169.82	0.034			+	26998	LYPSIRLS	8	49	474.7790156723804	947.5434784115608	2	474.7802429199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LYPSIRLS_	REV__ENST00000594070.5_1_19:19206777-19217195:+|nuORF	65.80317337860623	0.44433089765398776	6				NaN	NaN	0	NaN	13420	4274	17691
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17702	44.179	NaN	2660.1	30	0	797.8	0.214	+			32623	QYQKVPVLF	9	66	561.3206180588519	1120.6266831845037	2	561.3209838867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QYQKVPVLF_	ENSG00000173821|ENST00000582970|RNF213;nc|ENSG00000173821|Q63HN8-4|RNF213;nc|ENSG00000173821|Q63HN8|RNF213;RNF213|p.C5022Lfs*7|1|0.3|ENSG00000173821|chr17:80389237-80389237|G/-|frameshift_variant;RNF213|p.P2167Lfs*64|1|0.09|ENSG00000173821|chr17:80344834-80344835|-/T|frameshift_variant	60.29395666154354	0.21116425950210296	6				NaN	NaN	0	NaN	13423	4277	17701
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17703	44.183	NaN	1462.5	30	0	218.21	0.035			+	31627	QMGKRCSCM	9	64	522.2178579281416	NaN	0	522.2179565429688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QMGKRCSCM_	REV__ENSG00000128833|ENST00000261839|MYO5C	32.81241826257853	0.3119040447479903	6				NaN	NaN	0	NaN	13424	4277	17701
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17711	44.201	NaN	3133.8	30	0	259.96	0.213				-1	 	0	72	600.2889250623906	1198.5632971915811	2	600.2904052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13429	4280	17710
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17712	44.205	NaN	4740	30	0	611.42	0.106	+			11221	FIDASRLVY	9	72	542.2946964697953	1082.5748400063906	2	542.2957153320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FIDASRLVY_	CTNNA1|p.T832*|1|0.29|ENSG00000044115|chr5:138933859-138933862|CAGA/-|frameshift_variant;ENSG00000044115|ENST00000302763|CTNNA1;ENSG00000066032|ENST00000402739|CTNNA2;nc|ENSG00000044115|P35221-2|CTNNA1;nc|ENSG00000044115|P35221-3|CTNNA1;nc|ENSG00000066032|P26232-2|CTNNA2;nc|ENSG00000066032|P26232-3|CTNNA2;nc|ENSG00000066032|P26232-4|CTNNA2;nc|ENSG00000066032|P26232-5|CTNNA2;nc|ENSG00000066032|P26232-6|CTNNA2	104.0567914643314	0.03506238181059741	6				NaN	NaN	0	NaN	13430	4280	17710
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17713	44.207	NaN	2274	30	0	458.24	0.106	+			13497	GLLWACHLTY	10	64	588.7947648098107	1175.5749766864212	2	588.7941284179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GLLWACHLTY_	ENST00000403313.5_1_22:36877237-36877378:-|nuORF	45.9519527083369	0.4943008177357963	6				NaN	NaN	0	NaN	13431	4280	17710
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17714	44.209	NaN	2068.4	30	0	177.15	0.106	+			47909	VSLQEPSLY	9	58	518.2708085672858	1034.5270642013716	2	518.2703247070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSLQEPSLY_	nc|ENSG00000111481|P61923-4|COPZ1	39.252832667884924	0.4290233611298554	6				NaN	NaN	0	NaN	13432	4280	17710
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17715	44.21	NaN	331.43	30	0	45.133	0.03			+	13110	GGGGAGFF	8	23	335.15344814335714	668.2923433535143	2	335.1539306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GGGGAGFF_	REV__ENSG00000139737|ENST00000418532|SLAIN1;REV__nc|ENSG00000139737|Q8ND83|SLAIN1;REV__SLAIN1|p.G311Rfs*4|1|0.24|ENSG00000139737|chr13:77746586-77746587|-/A|frameshift_variant;REV__SLAIN1|p.H465Afs*11|1|0.37|ENSG00000139737|chr13:77760867-77760868|-/G|frameshift_variant;REV__SLAIN1|p.T312Hfs*96|1|0.28|ENSG00000139737|chr13:77746587-77746587|A/-|frameshift_variant	5.08689130490037	0.7762486542322466	6				NaN	NaN	0	NaN	13433	4280	17710
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17721	44.226	NaN	1550.3	30	0	239.11	0.146				-1	EMLALGNNHF	10	47	387.8506916689438	NaN	0	387.5166015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_EM(Oxidation (M))LALGNNHF_	ENSG00000187957|ENST00000341772|DNER;ENST00000482831.1_1_2:230445052-230451435:-|nuORF	33.921630207806714	0.38879399011744475	6				NaN	NaN	0	NaN	13436	4283	17720
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17730	44.249	NaN	2850.4	30	0	1015.1	0.214				-1	 	0	53	492.2810316823574	982.5475104315149	2	492.28125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13442	4286	17729
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17731	44.252	NaN	1692.4	30	0	108.32	0.106	+			16072	HCCSAGRKLW	10	70	580.7769270830383	1159.5393012328766	2	580.778564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HCCSAGRKLW_	ENST00000413474.5_1_3:195711124-195712546:-|nuORF	34.172542307311794	0.6007644933930345	6				NaN	NaN	0	NaN	13443	4286	17729
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17732	44.254	NaN	1457.5	30	0	71.072	0.106	+			29591	PFPKLVTTAG	10	61	515.7996178027258	1029.5846826722516	2	515.799560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PFPKLVTTAG_	ENST00000467050.1_1_7:193951-194146:-|nuORF	34.172542307311794	0.6007644933930345	6				NaN	NaN	0	NaN	13444	4286	17729
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17733	44.256	NaN	1039.4	30	0	41.69	0.106				-1	 	0	53	435.2508377676048	868.4871226020097	2	435.2505187988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13445	4286	17729
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17734	44.258	NaN	1063.3	30	0	135.08	0.035	+			20752	KGYATGLIGK	10	50	504.2976379394531	NaN	0	504.2976379394531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KGYATGLIGK_	ENSG00000157399|ENST00000381134|ARSL	22.579656572578934	0.4201028297492154	6				NaN	NaN	0	NaN	13446	4286	17729
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17751	44.302	NaN	2806.2	30	0	241.16	0.144	+			29304	NYLVLPNRI	9	62	551.3223824579853	1100.6302119827706	2	551.3211669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NYLVLPNRI_	ENSG00000117868|ENST00000275418|ESYT2;nc|ENSG00000117868|A0FGR8-2|ESYT2;nc|ENSG00000117868|A0FGR8-4|ESYT2;nc|ENSG00000117868|A0FGR8-6|ESYT2;nc|ENSG00000117868|A0FGR8|ESYT2	65.46538089061403	0.16805504838372562	6				NaN	NaN	0	NaN	13457	4292	17750
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17765	44.344	NaN	6909.7	30	0	465.08	0.14				-1	 	0	80	391.22485572118643	780.4351585091729	2	391.2248229980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13465	4298	17764
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17774	44.366	NaN	3791.9	30	0	437.56	0.214	+			40890	SVFLFLNIA	9	66	512.2969346455046	1022.5793163578093	2	512.2970581054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVFLFLNIA_	ENSG00000212127|ENST00000537503|TAS2R14	58.22992032128504	0.22837015374068087	6				NaN	NaN	0	NaN	13471	4301	17773
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17775	44.37	NaN	2378.5	30	0	178.98	0.106	+			37915	SPDATIRIW	9	65	529.7845834798973	1057.5546140265944	2	529.7846069335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SPDATIRIW_	ENSG00000110107|ENST00000227524|PRPF19;PRPF19|p.S440Hfs*2|1|0.3|ENSG00000110107|chr11:60897945-60897945|A/-|frameshift_variant	88.17693792209575	0.07000514020414955	6				NaN	NaN	0	NaN	13472	4301	17773
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17776	44.372	NaN	3708.9	30	0	1193.9	0.106	+			49914	VYTTTVHWL	9	59	560.294977974372	1118.575403015544	2	560.2962036132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYTTTVHWL_	ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1670Tfs*23|1|0.29|ENSG00000174231|chr17:1659487-1659487|C/-|frameshift_variant	71.29570347882199	0.13518600952103718	6				NaN	NaN	0	NaN	13473	4301	17773
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17777	44.373	NaN	1687.9	30	0	224.83	0.106	+			17996	IIAFVLEGK	9	62	495.3043021702929	988.5940514073858	2	495.3046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IIAFVLEGK_	ENSG00000152291|ENST00000377386|TGOLN2;nc|ENSG00000152291|O43493-3|TGOLN2;nc|ENSG00000152291|O43493-4|TGOLN2;nc|ENSG00000152291|O43493-5|TGOLN2;nc|ENSG00000152291|O43493-6|TGOLN2;nc|ENSG00000152291|O43493-7|TGOLN2	58.2462437865262	0.22823408064396822	6				NaN	NaN	0	NaN	13474	4301	17773
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17778	44.375	NaN	1115.4	30	0	114.53	0.034			+	29738	PHPTMPAQ	8	51	468.71392822265625	NaN	0	468.71392822265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))PHPTM(Oxidation (M))PAQ_	REV__ENST00000564315.1_1_16:70516583-70530267:-|nuORF	42.47446043378293	1.7418937515398478	6				NaN	NaN	0	NaN	13475	4301	17773
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17796	44.42	NaN	1871.2	30	0	199.21	0.214	+			28273	NDYKIALL	8	57	475.27078010280354	948.5270072724071	2	475.27069091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NDYKIALL_	ENSG00000112282|ENST00000368068|MED23;MED23|p.F896Lfs*5|1|0.27|ENSG00000112282|chr6:131596608-131596608|A/-|frameshift_variant;MED23|p.H1213Mfs*26|1|0.32|ENSG00000112282|chr6:131591362-131591362|G/-|frameshift_variant;nc|ENSG00000112282|Q9ULK4-2|MED23;nc|ENSG00000112282|Q9ULK4-3|MED23;nc|ENSG00000112282|Q9ULK4-4|MED23;nc|ENSG00000112282|Q9ULK4-5|MED23	52.936696900407355	0.5717071646657654	6				NaN	NaN	0	NaN	13487	4307	17795
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17797	44.424	NaN	1986.9	30	0	208.31	0.037				-1	INECKTWTL	9	66	582.7889267645879	1163.5633005959758	2	582.791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_INEC(Carbamidomethyl (C))KTWTL_	tr|U7SHD3|U7SHD3_FUSNUtRNA-2-methylthio-N(6)-dimethylallyladenosinesynthaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=miaBPE=3SV=1	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	13488	4307	17795
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17804	44.442	NaN	8710.9	30	0	801.61	0.215				-1	 	0	62	505.2762441318402	1008.5379353304804	2	505.27716064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13492	4310	17803
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17805	44.446	NaN	2967.3	30	0	197.97	0.106				-1	 	0	61	413.2377328335942	824.4609127339884	2	413.2383117675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13493	4310	17803
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17806	44.448	NaN	2560.4	30	0	308.38	0.106	+			17338	IAIGSQPVL	9	49	449.27325139821727	896.5319498632346	2	449.27386474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IAIGSQPVL_	ENSG00000068912|ENST00000185150|ERLEC1;nc|ENSG00000068912|Q96DZ1-3|ERLEC1	58.22992032128504	0.22837015374068087	6				NaN	NaN	0	NaN	13494	4310	17803
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17807	44.449	NaN	4333.5	30	0	694.69	0.106				-1	 	0	53	444.7443691110823	887.4741852889646	2	444.744873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13495	4310	17803
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17808	44.451	NaN	1942.9	30	0	155.88	0.106			+	29126	NTVSDRVLF	9	64	525.7832438524989	NaN	0	525.7843017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NTVSDRVLF_	REV__ENSG00000129946|ENST00000264554|SHC2;REV__ENST00000588376.5_1_19:418930-422520:-|nuORF	39.252832667884924	0.27938773122138094	6				NaN	NaN	0	NaN	13496	4310	17803
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17809	44.453	NaN	1729.2	30	0	138.21	0.037			+	-1	ARICKPLFT	9	56	369.21216939214446	NaN	0	369.211669921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_ARIC(Carbamidomethyl (C))KPLFT_	REV__ENSG00000096968|ENST00000381652|JAK2;REV__JAK2|p.F556Lfs*12|1|0.35|ENSG00000096968|chr9:5072515-5072515|T/-|frameshift_variant;REV__JAK2|p.P501Qfs*10|1|0.06|ENSG00000096968|chr9:5069193-5069193|C/-|frameshift_variant	37.81151784470057	0.28666463014928195	6				NaN	NaN	0	NaN	13497	4310	17803
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17827	44.497	NaN	2122.7	30	0	644.22	0.214	+			31043	QEVLQQVL	8	54	478.7734633615482	955.5323737898964	2	478.7743225097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QEVLQQVL_	ENSG00000130590|ENST00000369886|SAMD10;ENST00000478694.1_1_20:62606865-62609703:-|nuORF	58.78195531508484	0.5138399468736706	6				NaN	NaN	0	NaN	13509	4316	17826
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17828	44.5	NaN	1987.2	30	0	154.15	0.106	+			25564	LPYTVVIHY	9	66	552.8074710723191	1103.6003892114381	2	552.8092041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LPYTVVIHY_	ENSG00000164307|ENST00000443439|ERAP1;ENST00000503921.5_1_5:96133011-96143586:-|nuORF;ERAP1|p.T584Qfs*21|1|0.21|ENSG00000164307|chr5:96786479-96786479|T/-|frameshift_variant;ERAP1|p.T768Nfs*53|1|0.2|ENSG00000164307|chr5:96781837-96781838|-/GAAAT|frameshift_variant;nc|ENSG00000164307|Q9NZ08-2|ERAP1	50.0245360154114	0.3026755932229825	6				NaN	NaN	0	NaN	13510	4316	17826
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17829	44.502	NaN	1217.5	30	0	80.977	0.033	+			46365	VEKVAIPM	8	53	451.7542110253245	NaN	0	451.75445556640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_VEKVAIPM(Oxidation (M))_	AGBL4|p.P470Qfs*27|1|0.04|ENSG00000186094|chr1:48534278-48534279|-/TTTGT|frameshift_variant;ENSG00000186094|ENST00000371839|AGBL4;nc|ENSG00000186094|Q5VU57-2|AGBL4	47.91560031466742	1.7418937515398478	6				NaN	NaN	0	NaN	13511	4316	17826
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17835	44.518	NaN	1950.3	30	0	352.95	0.214	+			42798	TEALPVKLI	9	65	492.3100436764869	982.6055344197738	2	492.3105773925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEALPVKLI_	ENSG00000171848|ENST00000304567|RRM2;ENST00000426279.1_1_X:44168653-44169127:-|nuORF;nc|ENSG00000171848|P31350-2|RRM2	47.657333605630114	0.33044192980041115	6				NaN	NaN	0	NaN	13514	4319	17834
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17836	44.522	NaN	1512.1	30	0	189.53	0.106				-1	 	0	51	502.3123197966162	1002.6100866600324	2	502.3122253417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13515	4319	17834
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17837	44.524	NaN	1812.6	30	0	114.05	0.106	+			6060	AVMNFVVRY	9	62	549.7911639146346	1097.567774896069	2	549.7923583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVMNFVVRY_	ENSG00000106397|ENST00000223127|PLOD3	79.45101966838831	0.09992237243120712	6				NaN	NaN	0	NaN	13516	4319	17834
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17838	44.525	NaN	965.5	30	0	112.98	0.034	+			18300	IPPLIKSVV	9	51	483.3224755122496	964.6303980912992	2	483.32281494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IPPLIKSVV_	DSCAM|p.G1997Afs*3|1|0.1|ENSG00000171587|chr21:40013083-40013083|C/-|frameshift_variant;ENSG00000171587|ENST00000400454|DSCAM	26.79610172149135	0.5528238334041078	6				NaN	NaN	0	NaN	13517	4319	17834
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17846	44.545	NaN	3178.5	30	0	444.79	0.213	+			49604	VYGNWNGPHR	10	74	600.2889250623906	1198.5632971915811	2	600.2896728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYGNWNGPHR_	ENSG00000095713|ENST00000370597|CRTAC1;nc|ENSG00000095713|Q9NQ79-2|CRTAC1;nc|ENSG00000095713|Q9NQ79-3|CRTAC1	37.15910966729921	0.575322462179216	6				NaN	NaN	0	NaN	13522	4322	17845
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17847	44.549	NaN	1758.8	30	0	351.56	0.106			+	24872	LKFIVDPK	8	46	480.29907694876607	958.5836009643322	2	480.29937744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LKFIVDPK_	REV__ENSG00000196437|ENST00000316950|ZNF569;REV__ENSG00000198040|ENST00000539354|ZNF84;REV__ENSG00000198185|ENST00000692313|ZNF334;REV__ENSG00000198453|ENST00000333987|ZNF568;REV__ENSG00000221994|ENST00000276054|ZNF630;REV__ENST00000276054.8_1_X:47919586-47926376:-|nuORF;REV__nc|ENSG00000221994|Q2M218-2|ZNF630;REV__nc|ENSG00000291239|Q3ZCX4-2|ZNF568;REV__nc|ENSG00000291239|Q3ZCX4-3|ZNF568;REV__ZNF569|p.K464Nfs*78|1|0.1|ENSG00000196437|chr19:37413266-37413266|T/-|frameshift_variant	31.529811441608018	0.715883593221515	6				NaN	NaN	0	NaN	13523	4322	17845
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17848	44.551	NaN	2810.8	30	0	253.58	0.106	+			3158	ASILSLVTK	9	61	466.29414298738016	930.5737330415603	2	466.2945251464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASILSLVTK_	ENSG00000143621|ENST00000361891|ILF2	83.6470233535746	0.08277643980271215	6				NaN	NaN	0	NaN	13524	4322	17845
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17849	44.553	NaN	1626.2	30	0	185.32	0.106			+	11396	FLPCLHVY	8	51	496.2566498386581	990.4987467441163	2	496.2571716308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FLPCLHVY_	REV__nc|ENSG00000269313|Q9H6Y5-2|MAGIX;REV__nc|ENSG00000269313|Q9H6Y5-3|MAGIX	43.626045697637714	0.6338121648150432	6				NaN	NaN	0	NaN	13525	4322	17845
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17850	44.554	NaN	1049.9	30	0	131.13	0.036	+			51447	YVEKFHLQ	8	51	532.2826213425798	1062.5506897519595	2	532.2835083007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YVEKFHLQ_	ENSG00000236543|ENST00000430816|unknown	38.80614096846853	0.6637206697844082	6				NaN	NaN	0	NaN	13526	4322	17845
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17857	44.571	NaN	958.96	30	0	72.932	0.214	+			31818	QPQHIHIY	8	52	518.2709582492712	1034.5273635653423	2	518.2706298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QPQHIHIY_	ENSG00000115257|ENST00000300954|PCSK4;ENST00000441747.6_1_19:1482202-1488015:-|nuORF;ENST00000586616.5_1_19:1482426-1487301:-|nuORF;ENST00000591201.5_1_19:1483001-1487304:-|nuORF	39.021493756699265	0.6623843612266921	6				NaN	NaN	0	NaN	13530	4325	17856
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17858	44.574	NaN	1558.8	30	0	162.41	0.106			+	37746	SLTSSWISF	9	56	514.2583292225355	1026.502105511871	2	514.2586059570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLTSSWISF_	REV__ENST00000419821.6_1_12:118587740-118587944:-|nuORF	37.15910966729921	0.4535818937225704	6				NaN	NaN	0	NaN	13531	4325	17856
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17859	44.576	NaN	1760.6	30	0	118.2	0.106	+			30424	PYADQVFRI	9	62	554.7932699041912	1107.5719868751823	2	554.7935791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PYADQVFRI_	ENSG00000198265|ENST00000358691|HELZ;HELZ|p.L1089Ffs*20|1|0.05|ENSG00000198265|chr17:67128771-67128772|-/GTTAATG|frameshift_variant;nc|ENSG00000198265|P42694-2|HELZ	71.87747018426188	0.13267044672804276	6				NaN	NaN	0	NaN	13532	4325	17856
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17860	44.578	NaN	1122.9	30	0	108.1	0.034	+			35468	SASVVFTTY	9	43	487.7446230883322	973.4746932434645	2	487.7447814941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SASVVFTTY_	ENSG00000239857|ENST00000265857|GET4;nc|ENSG00000239857|Q7L5D6-2|GET4	51.33545320467046	0.2872990594074956	6				NaN	NaN	0	NaN	13533	4325	17856
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17872	44.604	NaN	2647.3	30	0	394.73	0.214	+			45981	VATFDDGKL	9	53	483.2501452631004	964.4857375930009	2	483.25042724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VATFDDGKL_	tr|U7SNE4|U7SNE4_FUSNUDUF2262domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01814PE=4SV=1	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	13542	4328	17871
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17873	44.607	NaN	1644.8	30	0	93.892	0.106				-1	 	0	60	435.2508377676048	868.4871226020097	2	435.2513732910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13543	4328	17871
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17874	44.609	NaN	1494.6	30	0	148.66	0.038				-1	KAKPDDAEMTS	11	61	604.776661554636	1207.538770176072	2	604.7780151367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_KAKPDDAEM(Oxidation (M))TS_	ENST00000587807.5_1_18:54293643-54306011:-|nuORF	29.170058357718403	0.683821074385409	6				NaN	NaN	0	NaN	13544	4328	17871
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17879	44.623	NaN	2206.4	30	0	201.67	0.214	+			27060	MADPNIRFL	9	60	538.7817616972409	1075.5489704612817	2	538.7822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MADPNIRFL_	ENSG00000184584|ENST00000330794|STING1;ENST00000507297.5_1_5:138855848-138858268:-|nuORF;ENST00000509573.5_1_5:138855949-138860944:-|nuORF	72.87924865735499	0.12833875048249987	6				NaN	NaN	0	NaN	13546	4331	17878
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17880	44.627	NaN	1418.7	30	0	155.49	0.106			+	11554	FPITQALLQ	9	64	515.7996178027258	1029.5846826722516	2	515.8004760742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FPITQALLQ_	REV__NFE2L2|p.F127I|1|0.35|ENSG00000116044|chr2:177233273-177233273|A/T|missense_variant	49.536043120802724	0.308405419312776	6				NaN	NaN	0	NaN	13547	4331	17878
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17881	44.629	NaN	1201.6	30	0	373.08	0.036	+			47245	VMPMMCRFT	9	53	558.248779296875	NaN	0	558.248779296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VMPMMCRFT_	ENST00000343876.6_2_2:179732817-179732874:-|nuORF	23.04248740728303	0.3589936788096251	6				NaN	NaN	0	NaN	13548	4331	17878
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17892	44.653	NaN	2523.9	30	0	758.77	0.143	+			11069	FETAMRLL	8	57	490.7650994958497	979.5156460584994	2	490.7652893066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FETAMRLL_	ENSG00000122218|ENST00000241704|COPA;nc|ENSG00000122218|P53621-2|COPA	71.87747018426188	0.391254423828572	6				NaN	NaN	0	NaN	13556	4334	17891
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17901	44.676	NaN	1530.1	30	0	142.82	0.145	+			42094	SYHSVVSCAAV	11	60	561.7686900739832	NaN	0	561.7691040039062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SYHSVVSCAAV_	ENSG00000184305|ENST00000509176|CCSER1;ENST00000508086.1_1_4:91234186-91389506:+|nuORF;ENST00000514352.5_1_4:91234111-91389506:+|nuORF;nc|ENSG00000184305|Q9C0I3-2|CCSER1	39.252832667884924	0.39048276625972167	6				NaN	NaN	0	NaN	13562	4337	17900
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17908	44.696	NaN	5157	30	0	254.44	0.214	+			30036	PPRARAGG	8	77	391.22485572118643	780.4351585091729	2	391.2253723144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PPRARAGG_	ENSG00000137261|ENST00000378214|KIAA0319;nc|ENSG00000137261|Q5VV43-2|KIAA0319;nc|ENSG00000137261|Q5VV43-3|KIAA0319;nc|ENSG00000137261|Q5VV43-4|KIAA0319	28.2542754592877	0.7411748056684583	6				NaN	NaN	0	NaN	13566	4340	17907
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17909	44.7	NaN	2254.9	30	0	168.57	0.106	+			46709	VGLNVFLEK	9	58	509.80018760979783	1017.5858222863957	2	509.80120849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VGLNVFLEK_	ENSG00000153037|ENST00000505459|SRP19;ENST00000512790.5_1_5:112197073-112227301:+|nuORF;nc|ENSG00000153037|P09132-2|SRP19	107.45493779368988	0.031594950556992824	6				NaN	NaN	0	NaN	13567	4340	17907
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17910	44.702	NaN	1380.5	30	0	155.46	0.036			+	43859	TLYSKEAKF	9	54	543.7961181995155	NaN	0	543.7994995117188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TLYSKEAKF_	REV__ENSG00000205045|ENST00000628453|SLFN12L;REV__nc|ENSG00000205045|Q6IEE8-2|SLFN12L;REV__nc|ENSG00000205045|Q6IEE8|SLFN12L	32.81241826257853	0.3119040447479903	6				NaN	NaN	0	NaN	13568	4340	17907
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17917	44.718	NaN	1505.7	30	0	354.98	0.214			+	21848	KRIVTKVEE	9	45	367.89166098734034	NaN	0	367.55755615234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KRIVTKVEE_	REV__CADPS|p.L1098Vfs*5|1|0.37|ENSG00000163618|chr3:62478299-62478300|-/T|frameshift_variant;REV__ENSG00000163618|ENST00000383710|CADPS;REV__nc|ENSG00000163618|Q9ULU8-2|CADPS;REV__nc|ENSG00000163618|Q9ULU8-3|CADPS;REV__nc|ENSG00000163618|Q9ULU8-4|CADPS	30.317721548370564	0.32449924987115025	6				NaN	NaN	0	NaN	13572	4343	17916
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17918	44.722	NaN	1271.4	30	0	105.25	0.037			+	12038	FYLATQNPIA	10	61	569.3006504823256	NaN	0	569.3016357421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FYLATQNPIA_	REV__nc|ENSG00000211750|A0A075B6N3|TRBV24-1	51.19269402634007	0.2980620950593832	6				NaN	NaN	0	NaN	13573	4343	17916
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17930	44.756	NaN	2294.4	30	0	179.55	0.143	+			4592	ATLGLVDIVK	10	61	514.8204189241683	1027.6262849151365	2	514.8215942382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATLGLVDIVK_	ENSG00000143799|ENST00000366794|PARP1;PARP1|p.T799Lfs*41|1|0.39|ENSG00000143799|chr1:226367491-226367491|T/-|frameshift_variant	63.53385203322761	0.33370026130094593	6				NaN	NaN	0	NaN	13579	4349	17929
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17940	44.78	NaN	1367.1	30	0	244.1	0.214			+	27484	MLVKWLMK	8	51	524.8054911355758	1047.5964293379516	2	524.8077392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MLVKWLMK_	REV__TCP11L1|p.N11Mfs*30|1|0.48|ENSG00000176148|chr11:33043803-33043803|A/-|frameshift_variant	42.47446043378293	0.6409579893742323	6				NaN	NaN	0	NaN	13586	4352	17939
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17941	44.783	NaN	1260.3	30	0	135.23	0.034	+			10718	FADGFVKAL	9	59	484.2656476940568	966.5167424549136	2	484.26580810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FADGFVKAL_	ENSG00000171223|ENST00000302754|JUNB	84.9155231211612	0.07920012719736333	6				NaN	NaN	0	NaN	13587	4352	17939
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17949	44.803	NaN	11197	30	0	786.55	0.214				-1	 	0	95	413.23770627302054	824.4608596128411	2	413.2379150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13592	4355	17948
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17950	44.807	NaN	1888.6	30	0	721.26	0.106	+			28383	NELITNAL	8	48	444.2445214466426	886.4744899600852	2	444.244873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NELITNAL_	ENSG00000079459|ENST00000220584|FDFT1;ENST00000446331.6_1_8:11660331-11696115:+|nuORF;nc|ENSG00000079459|P37268-2|FDFT1;nc|ENSG00000079459|P37268-3|FDFT1;nc|ENSG00000079459|P37268-4|FDFT1;nc|ENSG00000079459|P37268-5|FDFT1	51.19269402634007	0.5868595481438337	6				NaN	NaN	0	NaN	13593	4355	17948
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17951	44.809	NaN	2238.3	30	0	307.94	0.106	+			45105	TVINMVLVK	9	60	508.8108870823937	1015.6072212315875	2	508.8121032714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVINMVLVK_	L1MC1_dup2138|chr3:11203375-11203979:-|1.868897465743888|0.2278259033593264|3.04|481.0|9|2|sense	37.81151784470057	0.4459294069877048	6				NaN	NaN	0	NaN	13594	4355	17948
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17952	44.811	NaN	1591.8	30	0	92.824	0.031			+	30384	PVPPGLGT	8	50	369.2119369180177	NaN	0	369.211181640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PVPPGLGT_	REV__ENST00000250916.5_1_19:1853189-1853714:-|nuORF	44.53106598305862	1.7418937515398478	6				NaN	NaN	0	NaN	13595	4355	17948
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17959	44.829	NaN	1875.9	30	0	268.08	0.214	+			42432	TALGFVLYK	9	61	506.29649973050783	1010.5784465278157	2	506.2969665527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TALGFVLYK_	ENSG00000189221|ENST00000338702|MAOA;nc|ENSG00000189221|P21397-2|MAOA	35.61828744233558	0.47037581924408073	6				NaN	NaN	0	NaN	13599	4358	17958
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17960	44.832	NaN	1672.5	30	0	148.66	0.037	+			48076	VSSSVLPKAAF	11	52	369.2119369180177	NaN	0	369.21148681640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSSSVLPKAAF_	nc|ENSG00000129422|Q9ULD2-5|MTUS1	25.125986553469783	0.45344013546260314	6				NaN	NaN	0	NaN	13600	4358	17958
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17973	44.868	NaN	9188.3	30	0	1697.7	0.214				-1	 	0	60	502.3123197966162	1002.6100866600324	2	502.31292724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13607	4364	17972
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17974	44.872	NaN	2424.1	30	0	545.23	0.106	+			4369	ATGSWDSFLK	10	60	556.273863086296	1110.533173239392	2	556.2750854492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATGSWDSFLK_	ENSG00000078369|ENST00000378609|GNB1;ENSG00000111664|ENST00000229264|GNB3;ENSG00000172354|ENST00000303210|GNB2;nc|ENSG00000111664|P16520-2|GNB3;nc|ENSG00000172354|P62879-2|GNB2	73.84112541714126	0.2459384371494077	6				NaN	NaN	0	NaN	13608	4364	17972
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17975	44.874	NaN	2972.7	30	0	445.17	0.106				-1	 	0	56	498.7890548129206	995.5635566926412	2	498.7898254394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13609	4364	17972
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17976	44.876	NaN	1552.3	30	0	164.22	0.106	+			7791	DPHFFTQVF	9	54	569.2730593476576	1136.5315657621152	2	569.2735595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DPHFFTQVF_	ENSG00000171450|ENST00000302625|CDK5R2	52.936696900407355	0.27249468807391813	6				NaN	NaN	0	NaN	13610	4364	17972
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17977	44.878	NaN	2887.6	30	0	142.47	0.106	+			49548	VYAQVARLF	9	64	533.8053468085642	1065.5961406839283	2	533.805908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VYAQVARLF_	ENSG00000169375|ENST00000394947|SIN3A;ENST00000394947.7_1_15:75702535-75702580:-|nuORF;SIN3A|p.G659Afs*26|1|0.14|ENSG00000169375|chr15:75396375-75396375|C/-|frameshift_variant	111.64827973302667	0.027316110422332632	6				NaN	NaN	0	NaN	13611	4364	17972
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17978	44.879	NaN	1663.9	30	0	1031.9	0.033				-1	 	0	30	421.750901788878	841.4872506445561	2	421.751708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13612	4364	17972
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17990	44.905	NaN	2642.5	30	0	297.35	0.213			+	-1	LHFCKCKTY	9	58	600.2889250623906	1198.5632971915811	2	600.2909545898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_LHFCKC(Carbamidomethyl (C))KTY_	REV__nc|ENSG00000268758|Q86SQ3|ADGRE4P	40.5726180659479	0.4135428067754104	6				NaN	NaN	0	NaN	13621	4367	17989
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17991	44.908	NaN	1493.9	30	0	112.47	0.106				-1	 	0	50	355.2139919454669	708.4134309577338	2	355.2143249511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13622	4367	17989
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17992	44.91	NaN	1297.6	30	0	132.09	0.036			+	47509	VQMQPEKVF	9	53	553.2908935546875	NaN	0	553.2908935546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VQMQPEKVF_	REV__ENSG00000206072|ENST00000544088|SERPINB11;REV__nc|ENSG00000206072|Q96P15-2|SERPINB11;REV__SERPINB11|p.R288Pfs*5|1|0.4|ENSG00000206072|chr18:63723077-63723078|-/C|frameshift_variant	21.9598887501803	0.3626577482100488	6				NaN	NaN	0	NaN	13623	4367	17989
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17998	44.926	NaN	1670.8	30	0	460.49	0.214	+			10749	FAEIRVQF	8	62	505.27606715221634	1008.5375813712327	2	505.2765808105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FAEIRVQF_	ENSG00000102452|ENST00000251127|NALCN;ENST00000470333.1_1_13:101833448-102051507:-|nuORF;ENST00000497170.5_1_13:101795259-101997694:-|nuORF;NALCN|p.F1212Lfs*26|2|0.08|ENSG00000102452|chr13:101083146-101083146|A/-|frameshift_variant;NALCN|p.K626Nfs*19|1|0.45|ENSG00000102452|chr13:101144858-101144858|C/-|frameshift_variant;NALCN|p.K812Rfs*6|1|0.11|ENSG00000102452|chr13:101107719-101107719|T/-|frameshift_variant;NALCN|p.V852Wfs*19|1|0.07|ENSG00000102452|chr13:101107512-101107512|C/-|frameshift_variant;nc|ENSG00000102452|Q8IZF0-2|NALCN	45.9519527083369	0.6193794311207887	6				NaN	NaN	0	NaN	13626	4370	17997
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17999	44.93	NaN	1326.3	30	0	162.35	0.106			+	30708	QDELSPNRK	9	57	543.7782592773438	NaN	0	543.7782592773438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QDELSPNRK_	REV__ENST00000492682.5_1_1:117640837-117644143:+|nuORF	40.77816245573522	0.2702456086868081	6				NaN	NaN	0	NaN	13627	4370	17997
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18000	44.932	NaN	1548.9	30	0	840.26	0.033			+	7079	CVLVRARA	8	41	444.26605570595143	NaN	0	444.26641845703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_CVLVRARA_	REV__ENSG00000162542|ENST00000294543|TMCO4;REV__ENST00000462171.1_1_1:20076843-20097914:-|nuORF;REV__nc|ENSG00000162542|Q5TGY1-2|TMCO4;REV__TMCO4|p.F412Lfs*180|1|0.26|ENSG00000162542|chr1:19737399-19737400|AG/-|frameshift_variant	44.53106598305862	1.7418937515398478	6				NaN	NaN	0	NaN	13628	4370	17997
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18011	44.957	NaN	6358	30	0	362.55	0.141				-1	 	0	71	435.2508377676048	868.4871226020097	2	435.2510986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13636	4373	18010
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18020	44.979	NaN	1707	30	0	318.93	0.214	+			35709	SDLKVILM	8	51	459.7695689812565	917.524585029313	2	459.7703552246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SDLKVILM_	DHX36|p.M705Nfs*20|1|0.33|ENSG00000174953|chr3:154284905-154284906|-/T|frameshift_variant;DHX36|p.R854Efs*4|3|0.36|ENSG00000174953|chr3:154280586-154280586|T/-|frameshift_variant;ENSG00000174953|ENST00000496811|DHX36;nc|ENSG00000174953|Q9H2U1-2|DHX36;nc|ENSG00000174953|Q9H2U1-3|DHX36	51.33545320467046	0.5859736979383976	6				NaN	NaN	0	NaN	13642	4376	18019
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18021	44.983	NaN	1408.5	30	0	282.56	0.106				-1	 	0	57	568.3205487814483	567.3132723148483	1	568.3213500976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13643	4376	18019
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18022	44.985	NaN	1058.2	30	0	218.02	0.034			+	37484	SLKPNLYL	8	50	474.2816162109375	NaN	0	474.2816162109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLKPNLYL_	REV__tr|U7T3Y0|U7T3Y0_FUSNUSingle-stranded-DNA-specificexonucleaseRecJOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00655PE=3SV=1	37.15910966729921	1.7418937515398478	6				NaN	NaN	0	NaN	13644	4376	18019
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18040	45.03	NaN	2699.7	30	0	357.26	0.14				-1	 	0	52	415.7519940385421	829.4894351438842	2	415.75244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13656	4382	18039
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18046	45.048	NaN	2481.5	30	0	192.08	0.214	+			32733	RAPAPRGG	8	60	391.22485572118643	780.4351585091729	2	391.2249755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RAPAPRGG_	ENSG00000261308|ENST00000618634|FIGNL2	20.481830146152948	0.8005983782650069	6				NaN	NaN	0	NaN	13659	4385	18045
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18047	45.052	NaN	2983.5	30	0	1201.7	0.106	+			32607	QYMKIISSF	9	58	558.7911142247666	1115.567675516333	2	558.7932739257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QYMKIISSF_	ENSG00000170606|ENST00000304858|HSPA4;ENST00000514825.1_1_5:132437411-132440125:+|nuORF;HSPA4|p.S737Afs*9|1|0.18|ENSG00000170606|chr5:133103911-133103911|A/-|frameshift_variant	74.25504064058377	0.12238981753128622	6				NaN	NaN	0	NaN	13660	4385	18045
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18048	45.054	NaN	1182.1	30	0	176.24	0.037			+	8132	DYVQVTKSFA	10	51	579.2960826573062	1156.5776123814123	2	579.2972412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DYVQVTKSFA_	REV__ENSG00000135686|ENST00000564996|KLHL36;REV__ENST00000325279.4_1_16:84693236-84695736:+|nuORF;REV__nc|ENSG00000135686|Q8N4N3-2|KLHL36	35.15202426646627	0.5927656479315102	6				NaN	NaN	0	NaN	13661	4385	18045
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18058	45.076	NaN	1956.5	30	0	189.3	0.215	+			29326	NYQVTNSMF	9	60	552.2436487980308	1102.4727446628615	2	552.244384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NYQVTNSMF_	CNOT2-GPCPD1|1|fusion;ENSG00000111596|ENST00000229195|CNOT2;ENST00000547321.5_1_12:70671967-70723393:+|nuORF;ENST00000548021.5_1_12:70671967-70729348:+|nuORF;ENST00000549443.5_1_12:70671967-70726591:+|nuORF;ENST00000551873.5_1_12:70671967-70723208:+|nuORF;nc|ENSG00000111596|Q9NZN8-4|CNOT2;nc|ENSG00000111596|Q9NZN8-5|CNOT2	51.19269402634007	0.2889735674168909	6				NaN	NaN	0	NaN	13668	4388	18057
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18059	45.079	NaN	1937.8	30	0	162.75	0.036			+	15989	HALLWSAGVL	10	63	533.8053468085642	1065.5961406839283	2	534.7910766601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HALLWSAGVL_	REV__ENSG00000186115|ENST00000221700|CYP4F2;REV__ENST00000608168.1_1_19:16003249-16008861:-|nuORF	31.954861631926434	0.6188749698950511	6				NaN	NaN	0	NaN	13669	4388	18057
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18067	45.099	NaN	6201.1	30	0	966.8	0.143	+			46572	VFLPKDVAL	9	69	501.3046613927176	1000.5947698522352	2	501.3049011230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VFLPKDVAL_	ENSG00000096696|ENST00000379802|DSP;nc|ENSG00000096696|P15924-2|DSP;nc|ENSG00000096696|P15924-3|DSP	72.87924865735499	0.12833875048249987	6				NaN	NaN	0	NaN	13674	4391	18066
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18076	45.121	NaN	1274.9	30	0	94	0.144			+	18652	ISTSYLKAGF	10	62	543.794998211834	NaN	0	543.7957153320312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ISTSYLKAGF_	REV__ENSG00000164885|ENST00000485972|CDK5;REV__nc|ENSG00000164885|Q00535-2|CDK5	30.317721548370564	0.4006274431774794	6				NaN	NaN	0	NaN	13680	4394	18075
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18086	45.147	NaN	13017	30	0	887.27	0.214				-1	 	0	88	413.23770627302054	824.4608596128411	2	413.2379455566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13687	4397	18085
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18087	45.151	NaN	5830.2	30	0	1009.3	0.035				-1	 	0	60	504.30984726462293	1006.6051415960459	2	504.3104248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13688	4397	18085
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18095	45.169	NaN	1243.5	30	0	86.618	0.142			+	12660	GEIRKQIE	8	51	486.7793871225061	NaN	0	486.7792053222656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEIRKQIE_	REV__ENSG00000171004|ENST00000370833|HS6ST2;REV__HS6ST2|p.L496Cfs*7|1|0.51|ENSG00000171004|chrX:132628554-132628554|A/-|frameshift_variant;REV__nc|ENSG00000171004|Q96MM7-2|HS6ST2;REV__nc|ENSG00000171004|Q96MM7-3|HS6ST2;REV__nc|ENSG00000171004|Q96MM7|HS6ST2	44.377184641726394	1.7418937515398478	6				NaN	NaN	0	NaN	13693	4400	18094
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18102	45.189	NaN	735.99	30	0	52.945	0.142	+			7418	DELSLPEGP	9	41	478.732421875	NaN	0	478.732421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DELSLPEGP_	ENSG00000075702|ENST00000401500|WDR62;ENST00000587391.5_1_19:36592854-36593151:+|nuORF;nc|ENSG00000075702|O43379|WDR62	30.503639358989545	0.3235605894931338	6				NaN	NaN	0	NaN	13697	4403	18101
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18108	45.207	NaN	1469.7	30	0	118.2	0.144	+			37337	SLELLFQHP	9	60	542.2942615631374	1082.5739701930747	2	542.2950439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLELLFQHP_	ENSG00000116183|ENST00000367662|PAPPA2	35.61828744233558	0.47037581924408073	6				NaN	NaN	0	NaN	13700	4406	18107
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18115	45.227	NaN	2488.2	30	0	1921.6	0.214				-1	 	0	38	421.75098850153444	841.4874240698689	2	421.75152587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13704	4409	18114
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18116	45.231	NaN	1233.6	30	0	64.972	0.106	+			29182	NVIRDAVTY	9	57	525.7826766906876	NaN	0	525.7822265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NVIRDAVTY_	ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2	52.936696900407355	0.1864545979552969	6				NaN	NaN	0	NaN	13705	4409	18114
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18117	45.233	NaN	1069	30	0	190.31	0.106	+			50569	YAWGQTGL	8	40	448.2183532714844	NaN	0	448.2183532714844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YAWGQTGL_	ENSG00000265491|ENST00000582693|RNF115	40.5726180659479	1.7418937515398478	6				NaN	NaN	0	NaN	13706	4409	18114
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18118	45.235	NaN	1497.7	30	0	243.73	0.036			+	9649	ELSFSFFCL	9	51	546.758759052012	1091.502965170824	2	546.7593383789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ELSFSFFCL_	REV__ENST00000394524.7_1_4:114374340-114374508:-|nuORF	38.80614096846853	0.43426287593479557	6				NaN	NaN	0	NaN	13707	4409	18114
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18125	45.253	NaN	2896.5	30	0	797.57	0.214			+	13308	GKGATKGG	8	52	338.1930389301143	674.3715249270286	2	338.1935119628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GKGATKGG_	REV__ENST00000519932.5_1_6:112575345-112575919:-|nuORF	10.865556482863946	0.7853885997566867	6				NaN	NaN	0	NaN	13711	4412	18124
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18126	45.256	NaN	2592.6	30	0	160.81	0.106				-1	 	0	65	600.2889250623906	1198.5632971915811	2	600.29052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13712	4412	18124
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18127	45.258	NaN	2077.4	30	0	317.92	0.036	+			1481	AFMKGVFTF	9	60	532.2670709910377	1062.5195890488753	2	532.2683715820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_AFM(Oxidation (M))KGVFTF_	ENSG00000244187|ENST00000290079|TMEM141;ENST00000465017.5_1_9:139685862-139687281:+|nuORF;ENST00000489739.1_1_9:139685858-139686514:+|nuORF	71.29570347882199	0.13518600952103718	6				NaN	NaN	0	NaN	13713	4412	18124
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18135	45.278	NaN	982.85	30	0	188.9	0.144			+	-1	KMDKGLCTM	9	41	558.2486572265625	NaN	0	558.2486572265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),2 Oxidation (M)	_KM(Oxidation (M))DKGLC(Carbamidomethyl (C))TM(Oxidation (M))_	REV__ENST00000454068.5_1_1:173834376-173834660:-|nuORF	15.641811463095205	0.38404136392510424	6				NaN	NaN	0	NaN	13718	4415	18134
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18141	45.295	NaN	2283	30	0	153.25	0.214				-1	 	0	61	435.2508377676048	868.4871226020097	2	435.2510070800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13721	4418	18140
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18142	45.298	NaN	1508.3	30	0	176.16	0.106			+	10960	FEAKLAKE	8	49	468.26304372327314	934.5115345133463	2	468.2633056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FEAKLAKE_	REV__ENSG00000175718|ENST00000424776|RBMXL3;REV__RBMXL3|p.G100Afs*176|1|0.32|ENSG00000175718|chrX:115189734-115189734|C/-|frameshift_variant;REV__RBMXL3|p.G265Afs*11|1|0.38|ENSG00000175718|chrX:115190234-115190234|G/-|frameshift_variant;REV__RBMXL3|p.G692Afs*282|1|0.46|ENSG00000175718|chrX:115191512-115191512|G/-|frameshift_variant	34.172542307311794	0.6954784234644539	6				NaN	NaN	0	NaN	13722	4418	18140
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18143	45.3	NaN	626.83	30	0	63.496	0.106				-1	 	0	30	349.17723776819327	696.3399226031866	2	349.1781005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13723	4418	18140
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18144	45.302	NaN	1324.8	30	0	283.98	0.037	+			32584	QYAVLLNRF	9	63	562.3161652270771	1122.6177775209542	2	562.819091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QYAVLLNRF_	ENSG00000178694|ENST00000314622|NSUN3;ENST00000476588.5_1_3:93781949-93803329:+|nuORF	29.14955571784316	0.5308295550522326	6				NaN	NaN	0	NaN	13724	4418	18140
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18152	45.32	NaN	854.17	30	0	169.44	0.139				-1	 	0	35	357.1666794354913	712.3188059377826	2	357.1671447753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13729	4421	18151
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18166	45.362	NaN	4603.9	30	0	989.61	0.214	+			39436	STEFLALMK	9	63	520.2770096266959	1038.5394663201917	2	520.2783813476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STEFLALMK_	DYNC1H1|p.F2635Lfs*67|1|0.16|ENSG00000197102|chr14:102017141-102017141|T/-|frameshift_variant;DYNC1H1|p.G1902Vfs*27|2|0.27|ENSG00000197102|chr14:102006154-102006154|G/-|frameshift_variant;DYNC1H1|p.K3112Hfs*3|1|0.31|ENSG00000197102|chr14:102027998-102027999|-/TCACAAG|frameshift_variant;DYNC1H1|p.W4201Gfs*43|1|0.42|ENSG00000197102|chr14:102043958-102043958|G/-|frameshift_variant;ENSG00000197102|ENST00000360184|DYNC1H1	110.11987700582712	0.028875675806141952	6				NaN	NaN	0	NaN	13737	4427	18165
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18167	45.365	NaN	1434.4	30	0	410.51	0.038				-1	AIKKGGPMHMI	11	40	405.55281233260587	NaN	0	405.55242919921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Oxidation (M)	_AIKKGGPM(Oxidation (M))HM(Oxidation (M))I_	ENSG00000152749|ENST00000376958|GPR180;GPR180|p.L369Yfs*24|1|0.34|ENSG00000152749|chr13:94625981-94625981|T/-|frameshift_variant	25.125986553469783	0.45344013546260314	6				NaN	NaN	0	NaN	13738	4427	18165
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18176	45.386	NaN	1077.9	30	0	121.9	0.143	+			7813	DPNFKKET	8	51	489.7494892900796	977.4844256469593	2	489.7496337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DPNFKKET_	BRCA2|p.E3316Rfs*11|1|0.3|ENSG00000139618|chr13:32398452-32398453|-/A|frameshift_variant;BRCA2|p.K1691Nfs*15|1|0.11|ENSG00000139618|chr13:32339422-32339422|A/-|frameshift_variant;BRCA2|p.L574Ffs*21|1|0.05|ENSG00000139618|chr13:32333199-32333200|-/TTTAAAGTTTGGATCA|frameshift_variant;BRCA2|p.N1544Tfs*24|1|0.22|ENSG00000139618|chr13:32338982-32338982|A/-|frameshift_variant;BRCA2|p.N1642Mfs*2|1|0.08|ENSG00000139618|chr13:32339277-32339277|A/-|frameshift_variant;BRCA2|p.N1784Tfs*7|1|0.4|ENSG00000139618|chr13:32339700-32339700|A/-|frameshift_variant;BRCA2|p.N986Kfs*2|1|0.32|ENSG00000139618|chr13:32337305-32337306|-/A|frameshift_variant;BRCA2|p.T2515Nfs*24|1|0.35|ENSG00000139618|chr13:32356530-32356531|-/A|frameshift_variant;BRCA2|p.T2685Hfs*9|1|0.05|ENSG00000139618|chr13:32363251-32363251|A/-|frameshift_variant;ENSG00000139618|ENST00000380152|BRCA2	37.81151784470057	0.6698925118251505	6				NaN	NaN	0	NaN	13744	4430	18175
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18186	45.41	NaN	1910.7	30	0	95.379	0.215				-1	 	0	60	391.22485572118643	780.4351585091729	2	391.22528076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13751	4433	18185
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18187	45.413	NaN	3747.2	30	0	426.71	0.106				-1	 	0	71	557.8011801618477	1113.5878073904953	2	557.8026733398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13752	4433	18185
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18188	45.415	NaN	1033.6	30	0	42.89	0.034				-1	 	0	56	457.2638080197712	912.5130631063424	2	457.2643127441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13753	4433	18185
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18197	45.437	NaN	1381	30	0	126.96	0.145				-1	YIVPLMAAVM	10	59	570.2948572053564	1138.5751614775127	2	570.295654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_YIVPLM(Oxidation (M))AAVM(Oxidation (M))_	CLCN3|p.D799Ifs*17|1|0.33|ENSG00000109572|chr4:169719928-169719928|A/-|frameshift_variant;ENSG00000109572|ENST00000513761|CLCN3;nc|ENSG00000109572|P51790-2|CLCN3;nc|ENSG00000109572|P51790-4|CLCN3;nc|ENSG00000109572|P51790-5|CLCN3	26.79610172149135	0.6610034878437611	6				NaN	NaN	0	NaN	13759	4436	18196
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18211	45.467	NaN	2206.3	30	0	1895.2	0.139				-1	 	0	24	346.7062403423012	691.3979277514024	2	346.7065124511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13770	4439	18210
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18222	45.494	NaN	12128	30	0	740.67	0.214				-1	 	0	92	413.23770627302054	824.4608596128411	2	413.2379455566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13778	4442	18221
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18223	45.497	NaN	724.22	30	0	57.116	0.03				-1	VGDDAQFEM	9	33	343.1397731202724	NaN	0	343.13983154296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_VGDDAQFEM(Oxidation (M))_	ENSG00000148730|ENST00000373218|EIF4EBP2	20.94693142431847	0.3660861156085067	6				NaN	NaN	0	NaN	13779	4442	18221
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18237	45.527	NaN	2182.2	30	0	150.32	0.214	+			12838	GENSPGGGG	9	49	366.1517782301607	730.2890035271214	2	366.1535339355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GENSPGGGG_	ENSG00000165506|ENST00000298292|DNAAF2;nc|ENSG00000165506|Q9NVR5-2|DNAAF2	25.450171626174864	0.5654022654467333	6				NaN	NaN	0	NaN	13790	4445	18236
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18238	45.531	NaN	4387.3	30	0	989.05	0.106	+			49884	VYTSGIYNI	9	55	515.2657851404717	1028.5170173477434	2	515.2667236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYTSGIYNI_	ENSG00000079308|ENST00000682258|TNS1;nc|ENSG00000079308|Q9HBL0-1|TNS1;nc|ENSG00000079308|Q9HBL0-2|TNS1;TNS1|p.G470Afs*23|1|0.3|ENSG00000079308|chr2:217848733-217848733|C/-|frameshift_variant;TNS1|p.G532Afs*9|1|0.23|ENSG00000079308|chr2:217848547-217848547|C/-|frameshift_variant;TNS1|p.G637Efs*11|1|0.16|ENSG00000079308|chr2:217848232-217848232|C/-|frameshift_variant;TNS1|p.P973Rfs*13|2|0.28|ENSG00000079308|chr2:217831535-217831535|G/-|frameshift_variant	79.71258880314673	0.09879134589249085	6				NaN	NaN	0	NaN	13791	4445	18236
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18239	45.533	NaN	1376.6	30	0	141.11	0.106	+			38212	SQGGRGGT	8	49	360.1752223065125	718.3358916798251	2	360.1755676269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SQGGRGGT_	ENST00000359692.10_3_19:10941786-10942158:+|nuORF	20.94693142431847	0.7975965917238792	6				NaN	NaN	0	NaN	13792	4445	18236
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18240	45.534	NaN	2772.1	30	0	363.77	0.106				-1	 	0	67	504.30984726462293	1006.6051415960459	2	504.31048583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13793	4445	18236
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18241	45.536	NaN	1794	30	0	191.7	0.106	+			6936	CPCTEEQQMGV	11	59	612.7373744540643	1223.4601959749284	2	613.2401733398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_CPCTEEQQMGV_	ENST00000565143.1_1_15:72493853-72494174:-|nuORF	31.529811441608018	0.6590691889962369	6				NaN	NaN	0	NaN	13794	4445	18236
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18242	45.538	NaN	1818.1	30	0	99.313	0.036			+	-1	GMQLCVVAR	9	64	525.2670473034177	NaN	0	525.2672119140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),Oxidation (M)	_GM(Oxidation (M))QLC(Carbamidomethyl (C))VVAR_	REV__ENSG00000139865|ENST00000553443|TTC6;REV__nc|ENSG00000139865|Q86TZ1-2|TTC6;REV__nc|ENSG00000139865|Q86TZ1|TTC6	53.351449002276354	0.18359631779194618	6				NaN	NaN	0	NaN	13795	4445	18236
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18248	45.554	NaN	2211	30	0	386.24	0.214	+			47431	VPSPAQIMY	9	58	503.25666680995494	1004.4987806867099	2	503.25701904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VPSPAQIMY_	ENSG00000179051|ENST00000375436|RCC2;RCC2|p.A423Qfs*56|1|0.13|ENSG00000179051|chr1:17413120-17413120|T/-|frameshift_variant	51.33545320467046	0.2872990594074956	6				NaN	NaN	0	NaN	13798	4448	18247
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18249	45.558	NaN	2426.9	30	0	156.33	0.106			+	30169	PSGENGGGG	9	51	366.1517782301607	730.2890035271214	2	366.652587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PSGENGGGG_	REV__ENSG00000176842|ENST00000394636|IRX5;REV__ENST00000558597.1_2_16:54966274-54967782:+|nuORF;REV__nc|ENSG00000176842|P78411-2|IRX5;REV__nc|ENSG00000176842|P78411-3|IRX5	23.04248740728303	0.5879033540491928	6				NaN	NaN	0	NaN	13799	4448	18247
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18250	45.56	NaN	1755	30	0	229.52	0.106	+			7238	DALITHVL	8	48	441.2574934835486	880.5004340338972	2	441.2576904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DALITHVL_	ADH1B|p.F353S|1|0.28|ENSG00000196616|chr4:99310810-99310810|A/G|missense_variant;ENSG00000187758|ENST00000209668|ADH1A;ENSG00000196616|ENST00000305046|ADH1B;nc|ENSG00000196616|P00325-2|ADH1B	65.80317337860623	0.44433089765398776	6				NaN	NaN	0	NaN	13800	4448	18247
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18251	45.561	NaN	1766	30	0	287.88	0.036			+	24386	LFTPKLPTF	9	63	532.3116769334707	1062.6088009337413	2	532.3114013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LFTPKLPTF_	REV__nc|ENSG00000079335|Q9UNH5-4|CDC14A	47.95952297671804	0.32689736945648856	6				NaN	NaN	0	NaN	13801	4448	18247
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18261	45.585	NaN	818.72	30	0	101.85	0.214	+			17302	IAEAFCSAL	9	48	491.2383348377668	NaN	0	491.2380065917969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_IAEAFC(Carbamidomethyl (C))SAL_	ENSG00000125863|ENST00000347364|MKKS	51.33545320467046	0.19748963086191895	6				NaN	NaN	0	NaN	13808	4451	18260
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18262	45.588	NaN	1576.9	30	0	955.26	0.106			+	12247	GASVPLVSI	9	38	421.7513496966057	NaN	0	421.7515869140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GASVPLVSI_	REV__ENST00000468090.5_1_21:45181177-45181723:+|nuORF	17.364965105453717	0.37820932774828947	6				NaN	NaN	0	NaN	13809	4451	18260
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18263	45.59	NaN	557.91	30	0	50.032	0.106	+			10507	EVTTHQAL	8	37	449.73672261075353	NaN	0	449.7370910644531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EVTTHQAL_	ENSG00000174840|ENST00000311180|PDE12;ENST00000487257.1_2_3:57545269-57545728:+|nuORF	24.20275056022122	1.7418937515398478	6				NaN	NaN	0	NaN	13810	4451	18260
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18264	45.592	NaN	1360.9	30	0	287.33	0.035			+	-1	DLTHIGSKM	9	52	509.2562438637373	1016.4979347942747	2	509.25653076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_DLTHIGSKM(Oxidation (M))_	REV__ENST00000378533.3_1_X:38033574-38037570:-|nuORF	29.14955571784316	0.5308295550522326	6				NaN	NaN	0	NaN	13811	4451	18260
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18272	45.61	NaN	6009.5	30	0	1002.8	0.214	+			17384	IAMGMAQAL	9	57	453.2320203943758	904.4494878555516	2	453.2325439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IAMGMAQAL_	ENSG00000183207|ENST00000595090|RUVBL2;ENST00000594017.5_1_19:49497156-49513425:+|nuORF;ENST00000596247.5_1_19:49507512-49519096:+|nuORF;nc|ENSG00000183207|Q9Y230-2|RUVBL2	128.81572412613596	0.015862941183890658	6				NaN	NaN	0	NaN	13816	4454	18271
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18273	45.614	NaN	2753.6	30	0	216.24	0.106			+	25276	LNRFVMPCY	9	69	600.2889250623906	1198.5632971915811	2	600.2901611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LNRFVMPC(Carbamidomethyl (C))Y_	REV__ENSG00000150867|ENST00000376573|PIP4K2A;REV__ENSG00000276293|ENST00000619039|PIP4K2B;REV__ENST00000422321.5_1_10:22856588-22898637:-|nuORF;REV__ENST00000432610.1_1_10:22896825-22898637:-|nuORF;REV__nc|ENSG00000150867|P48426-2|PIP4K2A;REV__nc|ENSG00000276293|P78356-2|PIP4K2B;REV__PIP4K2A|p.K261Rfs*9|1|0.06|ENSG00000150867|chr10:22550669-22550669|T/-|frameshift_variant;REV__PIP4K2A|p.R141Dfs*19|1|0.27|ENSG00000150867|chr10:22591700-22591700|T/-|frameshift_variant	42.47446043378293	0.39123495718708534	6				NaN	NaN	0	NaN	13817	4454	18271
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18274	45.616	NaN	1490.8	30	0	136.95	0.037			+	2748	AREVRMGKGT	10	49	368.8694152832031	NaN	0	368.8694152832031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AREVRMGKGT_	REV__ENST00000432460.1_3_2:219523968-219524121:-|nuORF	30.568863376406313	0.39980281766270914	6				NaN	NaN	0	NaN	13818	4454	18271
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18282	45.634	NaN	2424.1	30	0	129.81	0.214				-1	 	0	66	435.2508377676048	868.4871226020097	2	435.25115966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13823	4457	18281
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18283	45.638	NaN	1571.2	30	0	157.47	0.106			+	23487	LAFPCCSSSL	10	62	514.2333783201734	NaN	0	514.2334594726562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LAFPCCSSSL_	REV__ENST00000380243.8_2_14:99979836-99979959:-|nuORF	51.33545320467046	0.297159550775418	6				NaN	NaN	0	NaN	13824	4457	18281
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18284	45.64	NaN	4229.1	30	0	552.94	0.106				-1	 	0	55	477.2498924817416	952.4852320302832	2	477.25030517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13825	4457	18281
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18285	45.641	NaN	519.35	30	0	51.726	0.031				-1	 	0	29	349.1772107468017	696.3398685604034	2	349.17803955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13826	4457	18281
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18295	45.663	NaN	1575.9	30	0	99.164	0.143			+	17542	IDSQFNLY	8	61	500.24408158800946	998.473610242819	2	500.2440490722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IDSQFNLY_	REV__CSMD3|p.A3641Cfs*13|1|0.36|ENSG00000164796|chr8:112228799-112228800|-/A|frameshift_variant;REV__CSMD3|p.F3640Lfs*61|7|0.35|ENSG00000164796|chr8:112228800-112228800|A/-|frameshift_variant;REV__CSMD3|p.G3063Rfs*5|1|0.06|ENSG00000164796|chr8:112287208-112287209|-/G|frameshift_variant;REV__CSMD3|p.L2190Yfs*46|1|0.29|ENSG00000164796|chr8:112341560-112341560|A/-|frameshift_variant;REV__CSMD3|p.S2534Ifs*8|1|0.04|ENSG00000164796|chr8:112314002-112314003|-/GACACTAT|frameshift_variant;REV__ENSG00000164796|ENST00000297405|CSMD3;REV__nc|ENSG00000164796|Q7Z407-2|CSMD3;REV__nc|ENSG00000164796|Q7Z407-3|CSMD3;REV__nc|ENSG00000164796|Q7Z407-4|CSMD3;REV__nc|ENSG00000164796|Q7Z407-5|CSMD3	51.33545320467046	0.5859736979383976	6				NaN	NaN	0	NaN	13833	4460	18294
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18302	45.683	NaN	1379.2	30	0	204.15	0.214				-1	 	0	39	329.1800867498926	656.3456205665852	2	329.1807861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13837	4463	18301
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18303	45.687	NaN	1644.2	30	0	772.13	0.106	+			13081	GFPGAPGA	8	34	337.1690020442429	672.3234511552859	2	337.16925048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GFPGAPGA_	COL2A1|p.G741Wfs*29|1|0.36|ENSG00000139219|chr12:47982583-47982584|-/G|frameshift_variant;COL2A1|p.P1046Lfs*84|1|0.13|ENSG00000139219|chr12:47977628-47977628|G/-|frameshift_variant;COL2A1|p.P917Lfs*111|2|0.33|ENSG00000139219|chr12:47978742-47978742|G/-|frameshift_variant;COL2A1|p.Q479Rfs*150|1|0.18|ENSG00000139219|chr12:47986428-47986428|G/-|frameshift_variant;ENSG00000139219|ENST00000380518|COL2A1;nc|ENSG00000139219|P02458-1|COL2A1	16.704963439144045	0.7946246187734944	6				NaN	NaN	0	NaN	13838	4463	18301
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18304	45.689	NaN	1938.1	30	0	271.31	0.106	+			12297	GCPSKSGG	8	43	346.65448502052385	691.2944171078477	2	346.65576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GCPSKSGG_	ENST00000393240.7_1_12:79258084-79371603:+|nuORF	25.450171626174864	0.7628259754767981	6				NaN	NaN	0	NaN	13839	4463	18301
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18305	45.691	NaN	2064.7	30	0	140.49	0.036	+			723	AEAVQKFFL	9	66	526.7919021509011	1051.5692513686022	2	526.7918090820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEAVQKFFL_	ENSG00000173726|ENST00000366607|TOMM20	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	13840	4463	18301
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18316	45.714	NaN	2029.8	30	0	189.98	0.214	+			15861	GYGGGPAGG	9	40	346.65448502052385	691.2944171078477	2	346.65570068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GYGGGPAGG_	DHX36|p.K153Nfs*3|1|0.08|ENSG00000174953|chr3:154315189-154315190|TT/-|frameshift_variant;DHX36|p.M705Nfs*20|1|0.33|ENSG00000174953|chr3:154284905-154284906|-/T|frameshift_variant;DHX36|p.N193Mfs*25|1|0.09|ENSG00000174953|chr3:154315071-154315071|T/-|frameshift_variant;DHX36|p.R854Efs*4|3|0.36|ENSG00000174953|chr3:154280586-154280586|T/-|frameshift_variant;ENSG00000174953|ENST00000496811|DHX36;nc|ENSG00000174953|Q9H2U1-2|DHX36;nc|ENSG00000174953|Q9H2U1-3|DHX36	14.664097394203935	0.6112419832031292	6				NaN	NaN	0	NaN	13848	4466	18315
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18317	45.718	NaN	773.93	30	0	102.86	0.106	+			18132	ILGPPPPSF	9	38	462.7626953125	NaN	0	462.7626953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ILGPPPPSF_	ENSG00000015479|ENST00000394805|MATR3;ENST00000502422.5_1_5:138651717-138665081:+|nuORF;ENST00000509918.5_1_5:138651425-138657594:+|nuORF;ENST00000511978.5_1_5:138651425-138655027:+|nuORF;nc|ENSG00000280987|P43243-2|MATR3	52.29916861842294	0.1908481487866478	6				NaN	NaN	0	NaN	13849	4466	18315
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18318	45.72	NaN	624.72	30	0	55.641	0.106			+	-1	YNLIGFAM	8	40	472.7308654785156	NaN	0	472.7308654785156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_YNLIGFAM(Oxidation (M))_	REV__CACNA1A|p.P2221Rfs*45|1|0.48|ENSG00000141837|chr19:13208879-13208879|A/-|frameshift_variant;REV__CACNA1A|p.Q1743Pfs*29|1|0.24|ENSG00000141837|chr19:13234944-13234945|-/A|frameshift_variant;REV__ENSG00000141837|ENST00000360228|CACNA1A;REV__nc|ENSG00000141837|O00555-2|CACNA1A;REV__nc|ENSG00000141837|O00555-3|CACNA1A;REV__nc|ENSG00000141837|O00555-4|CACNA1A;REV__nc|ENSG00000141837|O00555-5|CACNA1A;REV__nc|ENSG00000141837|O00555-6|CACNA1A	37.028477286268924	1.7418937515398478	6				NaN	NaN	0	NaN	13850	4466	18315
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18319	45.722	NaN	805.3	30	0	96.351	0.034	+			28607	NKQTTTIN	8	40	460.247314453125	NaN	0	460.247314453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NKQTTTIN_	ENST00000399387.8_1_14:29242013-29261464:+|nuORF;nc|ENSG00000186960|Q86U37|LINC01551	21.9598887501803	1.7418937515398478	6				NaN	NaN	0	NaN	13851	4466	18315
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18327	45.741	NaN	1452.9	30	0	202.73	0.214	+			50896	YGAASPSSAIR	11	61	540.2792806088688	NaN	0	540.2801513671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YGAASPSSAIR_	ENSG00000128645|ENST00000331462|HOXD1	51.19269402634007	0.30675235723580535	6				NaN	NaN	0	NaN	13856	4469	18326
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18328	45.745	NaN	1140.3	30	0	165.66	0.034	+			37440	SLHSSTLLL	9	52	485.78167296410004	NaN	0	485.7810363769531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLHSSTLLL_	ENST00000379066.5_1_2:37479395-37479560:-|nuORF	37.15910966729921	0.2899585034171616	6				NaN	NaN	0	NaN	13857	4469	18326
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18336	45.763	NaN	5497.5	30	0	1204.9	0.214				-1	 	0	63	492.82560712147466	983.6366613097493	2	492.8263244628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13862	4472	18335
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18337	45.767	NaN	1533.1	30	0	67.606	0.106				-1	 	0	53	457.2638080197712	912.5130631063424	2	457.2640686035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13863	4472	18335
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18338	45.769	NaN	878.17	30	0	57.731	0.106	+			29991	PPGLLVIAPGN	11	49	524.3140258789062	NaN	0	524.3140258789062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PPGLLVIAPGN_	ENSG00000174306|ENST00000683867|ZHX3;nc|ENSG00000174306|Q9H4I2-2|ZHX3	15.641811463095205	0.456735970842152	6				NaN	NaN	0	NaN	13864	4472	18335
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18339	45.771	NaN	1807.3	30	0	203.8	0.034			+	21376	KMIGGLLEL	9	54	487.2903828307871	972.5662127283742	2	487.29156494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KMIGGLLEL_	REV__ENST00000527564.1_1_4:102269974-102270022:+|nuORF	74.25504064058377	0.12238981753128622	6				NaN	NaN	0	NaN	13865	4472	18335
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18353	45.808	NaN	7629.2	30	0	1312.8	0.215	+			46568	VFLDTTLTY	9	70	536.7817137795441	1071.5488746258882	2	536.7828979492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VFLDTTLTY_	ENST00000587743.1_1_17:74553936-74554101:+|nuORF	55.50420428727701	0.2510918378945873	6				NaN	NaN	0	NaN	13873	4478	18352
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18354	45.812	NaN	1298.9	30	0	95.653	0.106	+			6845	CIQHLMKLGS	10	52	565.2984045679814	NaN	0	565.2987060546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_CIQHLMKLGS_	ENST00000357277.7_1_X:17043263-17065533:+|nuORF	26.69291269510374	0.4125295221340092	6				NaN	NaN	0	NaN	13874	4478	18352
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18355	45.814	NaN	1502.7	30	0	263.31	0.032			+	17830	IFFLGAIMIF	10	50	391.2248741827218	NaN	0	391.22491455078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IFFLGAIMIF_	REV__ENSG00000013293|ENST00000231706|SLC7A14	24.519189625965996	0.41966695327750003	6				NaN	NaN	0	NaN	13875	4478	18352
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18365	45.837	NaN	7461.3	30	0	374.26	0.214				-1	 	0	70	413.23770627302054	824.4608596128411	2	413.2379150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13882	4481	18364
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18366	45.841	NaN	1109.5	30	0	170.69	0.034	+			37586	SLPAPAPLW	9	47	476.2702469622675	NaN	0	476.26983642578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLPAPAPLW_	ENSG00000178928|ENST00000698655|TPRX1;nc|ENSG00000178928|Q8N7U7-2|TPRX1;nc|ENSG00000178928|Q8N7U7|TPRX1	31.954861631926434	0.3162336699109506	6				NaN	NaN	0	NaN	13883	4481	18364
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18373	45.859	NaN	1710.9	30	0	398.69	0.214	+			46255	VEFPLRGL	8	55	465.77525630116855	NaN	0	465.77545166015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VEFPLRGL_	ENSG00000140455|ENST00000380324|USP3;nc|ENSG00000140455|Q9Y6I4-2|USP3;USP3|p.K438E|1|0.4|ENSG00000140455|chr15:63588798-63588798|A/G|missense_variant	57.81127852772723	1.7418937515398478	6				NaN	NaN	0	NaN	13887	4484	18372
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18374	45.862	NaN	958.26	30	0	160.48	0.034				-1	EMLTGGCLP	9	46	468.71383122167185	NaN	0	468.71429443359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_EM(Oxidation (M))LTGGCLP_	ENST00000280612.9_1_4:139163102-139163234:-|nuORF	31.954861631926434	0.3162336699109506	6				NaN	NaN	0	NaN	13888	4484	18372
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18381	45.879	NaN	1074.7	30	0	157.8	0.143	+			17447	IAYFGVSAAL	10	48	506.280558681431	NaN	0	506.28076171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IAYFGVSAAL_	ENSG00000139514|ENST00000380752|SLC7A1;SLC7A1|p.Q436Sfs*15|1|0.07|ENSG00000139514|chr13:29517777-29517777|G/-|frameshift_variant	29.14955571784316	0.4044631218331212	6				NaN	NaN	0	NaN	13892	4487	18380
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18391	45.913	NaN	1440.6	30	0	443.55	0.142				-1	GRLMRLAV	8	56	466.2800453336006	NaN	0	466.2802429199219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_GRLM(Oxidation (M))RLAV_	ENSG00000179698|ENST00000323662|WDR97;nc|ENSG00000179698|A6NE52-2|WDR97	28.2542754592877	1.7418937515398478	6				NaN	NaN	0	NaN	13896	4493	18390
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18400	45.936	NaN	1275.9	30	0	464.15	0.141	+			47549	VRAAAQAR	8	45	421.750732421875	NaN	0	421.750732421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VRAAAQAR_	ENSG00000069424|ENST00000378083|KCNAB2	19.359975847455235	1.7418937515398478	6				NaN	NaN	0	NaN	13902	4496	18399
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18405	45.953	NaN	929.12	30	0	103	0.214			+	13885	GRCEPEQG	8	50	438.1872886182549	874.3600243033098	2	438.1876525878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GRCEPEQG_	REV__ENST00000291825.11_2_19:40904515-40914122:-|nuORF;REV__ENST00000324001.7_2_19:40903812-40914122:-|nuORF	23.04248740728303	0.7814162927298575	6				NaN	NaN	0	NaN	13904	4499	18404
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18406	45.957	NaN	2641.3	30	0	296.21	0.106			+	24702	LHFCKCKTY	9	66	600.2889250623906	1198.5632971915811	2	600.2901000976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LHFCKC(Carbamidomethyl (C))KTY_	REV__nc|ENSG00000268758|Q86SQ3|ADGRE4P	50.0245360154114	0.3026755932229825	6				NaN	NaN	0	NaN	13905	4499	18404
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18407	45.959	NaN	1094.9	30	0	175.3	0.106	+			51259	YRDIPELQG	9	52	545.7820610944847	NaN	0	545.782470703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YRDIPELQG_	ENSG00000081760|ENST00000316519|AACS;nc|ENSG00000081760|Q86V21-3|AACS	39.252832667884924	0.27938773122138094	6				NaN	NaN	0	NaN	13906	4499	18404
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18408	45.96	NaN	1211.9	30	0	111.3	0.036			+	29330	NYSIDLVKL	9	58	532.8025411219257	1063.5905293106514	2	532.8040161132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NYSIDLVKL_	REV__ENSG00000187905|ENST00000442047|LRRC74B	52.936696900407355	0.27249468807391813	6				NaN	NaN	0	NaN	13907	4499	18404
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18414	45.977	NaN	8636.8	30	0	743.2	0.214				-1	 	0	84	435.2508038787179	868.4870548242358	2	435.2511291503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13910	4502	18413
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18415	45.98	NaN	1488.2	30	0	276.32	0.106	+			20876	KINSSAIKLQ	10	42	367.8915642783366	NaN	0	367.5574645996094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KINSSAIKLQ_	ENSG00000133895|ENST00000450708|MEN1;nc|ENSG00000133895|O00255-1|MEN1;nc|ENSG00000133895|O00255-3|MEN1	30.568863376406313	0.39980281766270914	6				NaN	NaN	0	NaN	13911	4502	18413
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18416	45.982	NaN	1634.8	30	0	896.19	0.106				-1	 	0	38	443.7639741772003	885.5133954212006	2	443.76434326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13912	4502	18413
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18417	45.984	NaN	895.63	30	0	207.89	0.038			+	4159	ATFCRELQIL	10	48	597.3202420940908	1192.6259312549814	2	597.3220825195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATFCRELQIL_	REV__ENSG00000256980|ENST00000370388|KHDC1L	39.252832667884924	0.5560298534376815	6				NaN	NaN	0	NaN	13913	4502	18413
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18430	46.021	NaN	2723	30	0	347.09	0.144			+	-1	LCYTHYSI	8	56	528.7442716376532	1055.4739903421064	2	528.7445678710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_LC(Carbamidomethyl (C))YTHYSI_	REV__ENSG00000055609|ENST00000262189|KMT2C;REV__ENSG00000167548|ENST00000301067|KMT2D;REV__KMT2C|p.F4496Lfs*21|3|0.28|ENSG00000055609|chr7:152148439-152148439|A/-|frameshift_variant;REV__KMT2C|p.I4868Lfs*37|1|0.28|ENSG00000055609|chr7:152138837-152138837|T/-|frameshift_variant;REV__KMT2C|p.K1164Rfs*17|1|0.4|ENSG00000055609|chr7:152222008-152222009|TT/-|frameshift_variant;REV__KMT2C|p.K1247Nfs*56|1|0.22|ENSG00000055609|chr7:152207400-152207400|T/-|frameshift_variant;REV__KMT2C|p.K2867Dfs*7|1|0.28|ENSG00000055609|chr7:152176853-152176854|TT/-|frameshift_variant;REV__KMT2C|p.P2292Hfs*13|1|0.25|ENSG00000055609|chr7:152180985-152180985|G/-|frameshift_variant;REV__KMT2C|p.S2816Ifs*6|1|0.44|ENSG00000055609|chr7:152177007-152177008|-/T|frameshift_variant;REV__KMT2C|p.T3715Qfs*4|1|0.34|ENSG00000055609|chr7:152162434-152162434|T/-|frameshift_variant;REV__KMT2D|p.A2119Lfs*25|1|0.13|ENSG00000167548|chr12:49041416-49041416|G/-|frameshift_variant;REV__KMT2D|p.A3552Sfs*4|1|0.51|ENSG00000167548|chr12:49034153-49034154|-/T|frameshift_variant;REV__KMT2D|p.A5076Hfs*2|1|0.12|ENSG00000167548|chr12:49026740-49026740|C/-|frameshift_variant;REV__KMT2D|p.G2279Wfs*20|1|0.45|ENSG00000167548|chr12:49040935-49040936|-/A|frameshift_variant;REV__KMT2D|p.G5182Afs*61|1|0.57|ENSG00000167548|chr12:49026421-49026421|C/-|frameshift_variant;REV__KMT2D|p.K1466Rfs*40|1|0.31|ENSG00000167548|chr12:49046632-49046632|G/-|frameshift_variant;REV__KMT2D|p.P2354Lfs*30|7|0.16|ENSG00000167548|chr12:49040709-49040709|G/-|frameshift_variant;REV__KMT2D|p.P2716Lfs*17|1|0.24|ENSG00000167548|chr12:49039519-49039519|C/-|frameshift_variant;REV__KMT2D|p.P3102Lfs*17|1|0.26|ENSG00000167548|chr12:49038051-49038051|G/-|frameshift_variant;REV__KMT2D|p.Q4156Nfs*5|1|0.15|ENSG00000167548|chr12:49032239-49032239|G/-|frameshift_variant;REV__KMT2D|p.S2532Lfs*11|1|0.24|ENSG00000167548|chr12:49040177-49040177|G/-|frameshift_variant;REV__KMT2D|p.S4327Afs*57|1|0.44|ENSG00000167548|chr12:49031727-49031727|G/-|frameshift_variant;REV__KMT2D|p.T4629Hfs*18|1|0.31|ENSG00000167548|chr12:49030394-49030395|-/G|frameshift_variant;REV__KMT2D|p.T4629Pfs*11|1|0.27|ENSG00000167548|chr12:49030395-49030395|G/-|frameshift_variant;REV__KMT2D|p.V3089Wfs*30|1|0.12|ENSG00000167548|chr12:49038091-49038091|C/-|frameshift_variant;REV__KMT2D|p.Y2907Tfs*3|1|0.26|ENSG00000167548|chr12:49038637-49038637|A/-|frameshift_variant;REV__nc|ENSG00000055609|Q8NEZ4-2|KMT2C;REV__nc|ENSG00000055609|Q8NEZ4-3|KMT2C;REV__nc|ENSG00000167548|O14686-3|KMT2D	33.51558372728122	0.7005509609380386	6				NaN	NaN	0	NaN	13920	4508	18429
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18454	46.1	NaN	6289.7	30	0	424.55	0.214				-1	 	0	86	457.2638080197712	912.5130631063424	2	457.2640075683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13932	4520	18453
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18455	46.103	NaN	2376.8	30	0	456.85	0.106				-1	 	0	58	492.82560712147466	983.6366613097493	2	492.82598876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13933	4520	18453
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18456	46.105	NaN	1173.6	30	0	157.8	0.106			+	50267	WRGGWPAQ	8	53	479.2376708984375	NaN	0	479.2376708984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_WRGGWPAQ_	REV__ENST00000485102.1_1_X:48673225-48673405:+|nuORF	35.200714571348534	1.7418937515398478	6				NaN	NaN	0	NaN	13934	4520	18453
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18457	46.107	NaN	946.78	30	0	182.7	0.035	+			48878	VVDASFFLK	9	54	513.2867445549219	1024.5589361766438	2	513.288330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVDASFFLK_	ENST00000507860.1_1_5:138629450-138650445:+|nuORF;ENST00000512876.5_1_5:138629414-138653336:+|nuORF;ENST00000513121.1_1_5:138629450-138650445:+|nuORF	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	13935	4520	18453
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18465	46.127	NaN	2135.6	30	0	247.77	0.145	+			45632	TYQTTLLHF	9	62	562.2923924009701	1122.5702318687402	2	562.2926635742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TYQTTLLHF_	ENSG00000003147|ENST00000402384|ICA1;ENST00000562640.1_1_16:22010196-22010523:+|nuORF;ICA1|p.E307Lfs*26|1|0.05|ENSG00000003147|chr7:8141801-8141802|-/TTTTTCAA|frameshift_variant;nc|ENSG00000003147|Q05084-2|ICA1;nc|ENSG00000003147|Q05084-3|ICA1	56.72105179125745	0.24094814563026265	6				NaN	NaN	0	NaN	13940	4523	18464
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18472	46.147	NaN	2370.8	30	0	353.41	0.214			+	49566	VYDSSIYIL	9	61	536.7817137795441	1071.5488746258882	2	537.283935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYDSSIYIL_	REV__ENSG00000038274|ENST00000321757|MAT2B;REV__nc|ENSG00000038274|Q9NZL9-2|MAT2B;REV__nc|ENSG00000038274|Q9NZL9-3|MAT2B;REV__nc|ENSG00000038274|Q9NZL9-4|MAT2B	31.954861631926434	0.5046124803899898	6				NaN	NaN	0	NaN	13944	4526	18471
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18473	46.151	NaN	2007.4	30	0	278.09	0.039	+			28787	NPFDQKLYVY	10	68	643.8249246964862	1285.6352964597722	2	644.3262939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NPFDQKLYVY_	ENSG00000102837|ENST00000219022|OLFM4	59.93077597824379	0.36646980200755325	6				NaN	NaN	0	NaN	13945	4526	18471
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18480	46.167	NaN	1526.6	30	0	239.54	0.214	+			8641	EDKIFLIN	8	44	496.2757112362856	990.5368695393712	2	496.2770080566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EDKIFLIN_	ENSG00000141524|ENST00000590602|TMC6;nc|ENSG00000141524|Q7Z403-2|TMC6;nc|ENSG00000141524|Q7Z403-3|TMC6	53.351449002276354	0.5676011784961348	6				NaN	NaN	0	NaN	13949	4529	18479
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18481	46.171	NaN	1084.6	30	0	62.708	0.035	+			29183	NVIRDAVTY	9	50	525.7835498431227	NaN	0	525.7840576171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NVIRDAVTY_	ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2	39.252832667884924	0.27938773122138094	6				NaN	NaN	0	NaN	13950	4529	18479
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18487	46.187	NaN	2378.9	30	0	153.38	0.214				-1	 	0	58	413.23770627302054	824.4608596128411	2	413.2380065917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13953	4532	18486
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18488	46.191	NaN	1451.4	30	0	179.01	0.106	+			15063	GTPERRKGSLA	11	48	391.22468141130804	NaN	0	391.2249755859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTPERRKGSLA_	ENSG00000110693|ENST00000683767|SOX6;ENSG00000134532|ENST00000451604|SOX5;ENST00000533658.5_1_11:16339950-16362794:-|nuORF;nc|ENSG00000110693|P35712-2|SOX6;nc|ENSG00000110693|P35712-3|SOX6;nc|ENSG00000110693|P35712-4|SOX6;nc|ENSG00000134532|P35711-2|SOX5;nc|ENSG00000134532|P35711-4|SOX5;nc|ENSG00000134532|P35711-5|SOX5;SOX5|p.K639Sfs*77|1|0.78|ENSG00000134532|chr12:23536525-23536525|T/-|frameshift_variant;SOX6|p.F490Lfs*7|1|0.35|ENSG00000110693|chr11:16046667-16046667|A/-|frameshift_variant;SOX6|p.G294Wfs*8|1|0.36|ENSG00000110693|chr11:16111822-16111823|-/G|frameshift_variant;SOX6|p.P293Lfs*3|1|0.36|ENSG00000110693|chr11:16111823-16111823|G/-|frameshift_variant	33.03940026070387	0.41817340257782254	6				NaN	NaN	0	NaN	13954	4532	18486
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18489	46.193	NaN	2835.7	30	0	593.85	0.035				-1	 	0	56	504.77102767348975	1007.5275024137795	2	504.77197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13955	4532	18486
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18495	46.209	NaN	1322.3	30	0	578.61	0.143	+			24245	LETITLIQ	8	49	465.77716064453125	NaN	0	465.77716064453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LETITLIQ_	ENSG00000091137|ENST00000644269|SLC26A4;nc|ENSG00000091137|O43511-2|SLC26A4	31.954861631926434	1.7418937515398478	6				NaN	NaN	0	NaN	13958	4535	18494
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18503	46.229	NaN	1299.1	30	0	142.95	0.214				-1	LVMLTLIQG	9	59	502.296944836615	1002.57933674003	2	502.2972412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LVM(Oxidation (M))LTLIQG_	ENST00000022615.8_1_8:42252643-42256287:+|nuORF	63.30626980617807	0.18605348971131092	6				NaN	NaN	0	NaN	13963	4538	18502
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18504	46.232	NaN	1127.6	30	0	73.614	0.106			+	8811	EELDKANMPI	10	55	580.2854936776657	NaN	0	580.2854614257812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EELDKANMPI_	REV__ENSG00000100220|ENST00000216038|RTCB;REV__RTCB|p.M246Wfs*11|4|0.28|ENSG00000100220|chr22:32398019-32398019|T/-|frameshift_variant	36.446750945000026	0.3805027428805705	6				NaN	NaN	0	NaN	13964	4538	18502
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18505	46.234	NaN	1096.1	30	0	134.48	0.036				-1	AWLVAHVRM	9	55	549.7962233883646	NaN	0	549.7967529296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_AWLVAHVRM(Oxidation (M))_	ENSG00000008838|ENST00000394128|MED24;MED24|p.E720Gfs*14|1|0.41|ENSG00000008838|chr17:40023224-40023225|-/A|frameshift_variant;MED24|p.K704Sfs*8|1|0.18|ENSG00000008838|chr17:40023272-40023272|G/-|frameshift_variant;MED24|p.P805Rfs*53|1|0.29|ENSG00000008838|chr17:40022663-40022663|G/-|frameshift_variant;nc|ENSG00000008838|O75448-2|MED24;THRA-MED24|1|fusion	35.200714571348534	0.2998460331538257	6				NaN	NaN	0	NaN	13965	4538	18502
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18513	46.254	NaN	1896.7	30	0	213.17	0.214	+			29339	NYTLVSHLI	9	62	530.2948066772152	1058.5750604212303	2	530.7969970703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NYTLVSHLI_	ENSG00000166986|ENST00000262027|MARS1;ENST00000537638.6_1_12:57905855-57911076:+|nuORF;ENST00000548630.1_1_12:57906018-57906171:+|nuORF	95.81516180277367	0.04847050768394289	6				NaN	NaN	0	NaN	13970	4541	18512
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18514	46.258	NaN	2252.1	30	0	146.3	0.031				-1	 	0	60	377.2273410045276	752.4401290758552	2	377.2275695800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13971	4541	18512
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18522	46.278	NaN	1105.6	30	0	134.24	0.142	+			11658	FQNAQAGSN	9	49	468.7139959777074	NaN	0	468.7139587402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FQNAQAGSN_	ENSG00000121057|ENST00000337714|AKAP1	40.77816245573522	0.2702456086868081	6				NaN	NaN	0	NaN	13976	4544	18521
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18528	46.296	NaN	2945.2	30	0	425.4	0.214			+	51130	YNILDQIL	8	61	496.2757112362856	990.5368695393712	2	496.2761535644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YNILDQIL_	REV__ENSG00000140650|ENST00000268261|PMM2;REV__ENST00000562448.1_1_16:8895761-8900277:+|nuORF;REV__ENST00000564030.5_1_16:8891706-8900277:+|nuORF;REV__nc|ENSG00000140650|O15305-2|PMM2	79.71258880314673	0.32596852995588826	6				NaN	NaN	0	NaN	13979	4547	18527
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18529	46.299	NaN	2061.5	30	0	165.59	0.038			+	10912	FDHFVRNQH	9	62	600.2889250623906	1198.5632971915811	2	600.2904663085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FDHFVRNQH_	REV__DDX6|p.R373Q|1|0.15|ENSG00000110367|chr11:118756316-118756316|C/T|missense_variant	29.14955571784316	0.5308295550522326	6				NaN	NaN	0	NaN	13980	4547	18527
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18537	46.318	NaN	16964	30	0	995.97	0.214				-1	 	0	95	435.2508038787179	868.4870548242358	2	435.2510986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13985	4550	18536
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18538	46.321	NaN	1979.2	30	0	1184	0.106				-1	 	0	40	443.7639741772003	885.5133954212006	2	443.7642822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13986	4550	18536
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18539	46.323	NaN	3254.9	30	0	1236.5	0.106	+			37190	SKACIPYLK	9	63	511.7881293568169	1021.5617057804338	2	511.7893981933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SKACIPYLK_	ENSG00000119471|ENST00000398805|HSDL2	60.11826168202944	0.21262886028301267	6				NaN	NaN	0	NaN	13987	4550	18536
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18540	46.325	NaN	718.07	30	0	55.085	0.033			+	7025	CSGKAEHSG	9	38	438.18707275390625	NaN	0	438.18707275390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_CSGKAEHSG_	REV__ATR|p.N1135*|1|0.36|ENSG00000175054|chr3:142542712-142542713|-/A|frameshift_variant;REV__ATR|p.S709Yfs*25|1|0.07|ENSG00000175054|chr3:142556093-142556094|AA/-|frameshift_variant;REV__ATR|p.S927Qfs*4|1|0.34|ENSG00000175054|chr3:142553254-142553255|-/A|frameshift_variant;REV__ENSG00000175054|ENST00000350721|ATR;REV__nc|ENSG00000175054|Q13535-2|ATR;REV__nc|ENSG00000175054|Q13535-3|ATR	21.9598887501803	0.3626577482100488	6				NaN	NaN	0	NaN	13988	4550	18536
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18548	46.345	NaN	1608.6	30	0	190.02	0.145	+			42171	SYTRLFSNF	9	62	567.7832022680135	NaN	0	567.7831420898438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SYTRLFSNF_	ENSG00000153560|ENST00000283629|UBP1;ENST00000486388.5_1_3:33438291-33450199:-|nuORF;ENST00000490112.1_1_3:33438535-33441732:-|nuORF;nc|ENSG00000153560|Q9NZI7-4|UBP1;UBP1|p.F382L|1|0.26|ENSG00000153560|chr3:33400223-33400223|G/T|missense_variant	56.43379154798735	0.16452882468284893	6				NaN	NaN	0	NaN	13993	4553	18547
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18553	46.361	NaN	2497.6	30	0	425.54	0.214	+			28116	NAIHAILLY	9	57	514.2998743208395	1026.585195708479	2	514.30029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAIHAILLY_	ENSG00000110090|ENST00000265641|CPT1A;nc|ENSG00000110090|P50416-2|CPT1A	62.97842346883844	0.18878643064686845	6				NaN	NaN	0	NaN	13995	4556	18552
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18554	46.365	NaN	2892.5	30	0	646.71	0.106	+			49688	VYKIERVFL	9	41	389.5690166976804	1165.6852206932413	3	389.5690612792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYKIERVFL_	ENST00000589189.5_1_18:33289914-33290001:+|nuORF	20.94693142431847	0.6074874384046576	6				NaN	NaN	0	NaN	13996	4556	18552
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18555	46.367	NaN	803.29	30	0	144.46	0.106	+			31439	QKPTDLLM	8	42	473.25706955562634	NaN	0	473.25701904296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QKPTDLLM_	ERCC1|p.A220T|1|0.09|ENSG00000012061|chr19:45414905-45414905|C/T|missense_variant	33.51558372728122	1.7418937515398478	6				NaN	NaN	0	NaN	13997	4556	18552
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18556	46.369	NaN	2089	30	0	559.69	0.039			+	33832	RQYLWDISIS	10	47	427.56046897796233	1279.659577534087	3	427.56060791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RQYLWDISIS_	REV__ENSG00000047936|ENST00000368507|ROS1;REV__nc|ENSG00000047936|P08922|ROS1;REV__ROS1|p.L1167*|1|0.19|ENSG00000047936|chr6:117359957-117359957|A/-|frameshift_variant;REV__ROS1|p.L1167Ffs*26|1|0.27|ENSG00000047936|chr6:117359956-117359957|-/A|frameshift_variant;REV__ROS1|p.N1247Mfs*14|1|0.11|ENSG00000047936|chr6:117357918-117357918|T/-|frameshift_variant;REV__ROS1|p.N1821Tfs*2|1|0.44|ENSG00000047936|chr6:117326319-117326319|T/-|frameshift_variant	29.14955571784316	0.6417842315402807	6				NaN	NaN	0	NaN	13998	4556	18552
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18563	46.385	NaN	3362.7	30	0	806.45	0.214			+	42586	TASSLFLHL	9	58	494.77608429214115	987.5376156510823	2	494.7762451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TASSLFLHL_	REV__ENSG00000152463|ENST00000378228|OLAH;REV__nc|ENSG00000152463|Q9NV23-2|OLAH;REV__OLAH|p.K164Sfs*10|2|0.24|ENSG00000152463|chr10:15065666-15065666|C/-|frameshift_variant;REV__OLAH|p.N251Ifs*6|1|0.13|ENSG00000152463|chr10:15073182-15073183|-/TTGTATTC|frameshift_variant	57.81127852772723	0.2318599694398087	6				NaN	NaN	0	NaN	14002	4559	18562
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18564	46.389	NaN	1047.4	30	0	101.49	0.106	+			17060	HQVQGLVST	9	52	484.7602233886719	NaN	0	484.7602233886719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HQVQGLVST_	ENSG00000168453|ENST00000381418|HR	35.61828744233558	0.29773779453147337	6				NaN	NaN	0	NaN	14003	4559	18562
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18565	46.391	NaN	605.37	30	0	58.119	0.038	+			24723	LHPEPEGQDPP	11	48	608.2873896216835	NaN	0	608.2879638671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LHPEPEGQDPP_	BOD1L2|p.P156H|1|0.49|ENSG00000228075|chr18:57147779-57147779|C/A|missense_variant	22.579656572578934	0.456735970842152	6				NaN	NaN	0	NaN	14004	4559	18562
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18592	46.459	NaN	1921.9	30	0	118.86	0.214				-1	 	0	60	457.2638080197712	912.5130631063424	2	457.2640380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14022	4568	18591
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18593	46.463	NaN	2905.7	30	0	494.61	0.106			+	-1	LSRLIMMK	8	62	504.2923289244583	1006.5701049157166	2	504.29229736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LSRLIM(Oxidation (M))MK_	REV__ENST00000261574.9_1_13:98660370-98662144:+|nuORF	60.97194046774394	0.49215940876911696	6				NaN	NaN	0	NaN	14023	4568	18591
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18594	46.465	NaN	1218.3	30	0	106.05	0.106	+			47499	VQHPFLNVF	9	57	550.7969360351562	NaN	0	550.7969360351562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VQHPFLNVF_	ENSG00000133878|ENST00000256261|DUSP26	40.5726180659479	0.27166212580479165	6				NaN	NaN	0	NaN	14024	4568	18591
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18595	46.467	NaN	1149.3	30	0	101.26	0.106			+	10215	ETGQLKQF	8	55	475.7508850097656	NaN	0	475.7508850097656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ETGQLKQF_	REV__VPS9D1|p.A137T|1|0.32|ENSG00000075399|chr16:89716484-89716484|C/T|missense_variant	38.80614096846853	1.7418937515398478	6				NaN	NaN	0	NaN	14025	4568	18591
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18596	46.468	NaN	818.25	30	0	208.75	0.034	+			31179	QGLSSQAKF	9	33	483.25595641622874	NaN	0	483.2562561035156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QGLSSQAKF_	ENSG00000170419|ENST00000402613|VSTM2A;nc|ENSG00000170419|Q8TAG5-2|VSTM2A;nc|ENSG00000170419|Q8TAG5|VSTM2A	20.94693142431847	0.3660861156085067	6				NaN	NaN	0	NaN	14026	4568	18591
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18603	46.486	NaN	1493.6	30	0	124.51	0.214	+			45612	TYPSQLPSL	9	59	503.265749997722	1004.5169470622441	2	503.2662658691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TYPSQLPSL_	ENSG00000130035|ENST00000252318|GALNT8	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	14030	4571	18602
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18604	46.49	NaN	1213.6	30	0	116.16	0.106			+	51106	YLVMTVFPL	9	52	541.7990112304688	NaN	0	541.7990112304688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YLVMTVFPL_	REV__tr|U7SNJ2|U7SNJ2_FUSNUPhosphatidatecytidylyltransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01733PE=3SV=1	45.9519527083369	0.2345902329052062	6				NaN	NaN	0	NaN	14031	4571	18602
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18605	46.492	NaN	1014.6	30	0	121.47	0.034	+			38300	SQYSKLLL	8	56	476.2784209862918	950.5422890393836	2	476.2796936035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SQYSKLLL_	ENSG00000022840|ENST00000325954|RNF10;ENST00000543675.5_1_12:120995397-121001178:+|nuORF;nc|ENSG00000022840|Q8N5U6-2|RNF10	40.5726180659479	0.6527593143185008	6				NaN	NaN	0	NaN	14032	4571	18602
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18611	46.508	NaN	1996.4	30	0	369.78	0.142				-1	 	0	56	486.76034358125725	971.5061342293145	2	486.76123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14035	4574	18610
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18618	46.527	NaN	1635.5	30	0	116.14	0.14				-1	 	0	55	413.23770627302054	824.4608596128411	2	413.23822021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14039	4577	18617
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18624	46.545	NaN	1417.5	30	0	205.38	0.143	+			10924	FDLLTKFQ	8	58	506.27990151490343	1010.5452500966069	2	506.7828369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FDLLTKFQ_	ENSG00000160360|ENST00000440944|GPSM1;nc|ENSG00000160360|Q86YR5-4|GPSM1;nc|ENSG00000160360|Q86YR5|GPSM1	37.15910966729921	0.6739408393984688	6				NaN	NaN	0	NaN	14042	4580	18623
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18629	46.561	NaN	2446.8	30	0	340.54	0.214	+			10552	EYALLYHTL	9	57	561.7945590556942	1121.5745651781883	2	561.79541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EYALLYHTL_	AOC1|p.R190Gfs*18|3|0.26|ENSG00000002726|chr7:150857033-150857033|C/-|frameshift_variant;ENSG00000002726|ENST00000360937|AOC1;nc|ENSG00000002726|P19801-2|AOC1	96.19043198914106	0.047412499214244314	6				NaN	NaN	0	NaN	14044	4583	18628
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18630	46.565	NaN	1033.3	30	0	38.515	0.034	+			13246	GILSVPAVAM	10	59	479.2771333969567	NaN	0	479.2765197753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GILSVPAVAM_	nc|ENSG00000188549|Q6ZUT6|CCDC9B	30.503639358989545	0.4000169810673414	6				NaN	NaN	0	NaN	14045	4583	18628
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18639	46.587	NaN	926.54	30	0	128.68	0.143				-1	LAELMKKVS	9	47	517.7973022460938	NaN	0	517.7973022460938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LAELM(Oxidation (M))KKVS_	tr|U7T4W2|U7T4W2_FUSNUbeta-lactamaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00215PE=3SV=1	35.61828744233558	0.29773779453147337	6				NaN	NaN	0	NaN	14051	4586	18638
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18643	46.603	NaN	1950.5	30	0	133.81	0.214	+			748	AEDLGLLQF	9	60	503.265749997722	1004.5169470622441	2	503.2659912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEDLGLLQF_	ENSG00000108839|ENST00000251535|ALOX12	44.116797842482775	0.37197099687881774	6				NaN	NaN	0	NaN	14052	4589	18642
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18644	46.607	NaN	2108.3	30	0	812.46	0.106	+			42286	TAEFRELY	8	52	514.7548684382498	NaN	0	514.7551879882812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAEFRELY_	ENSG00000187715|ENST00000405109|KBTBD12	38.80614096846853	1.7418937515398478	6				NaN	NaN	0	NaN	14053	4589	18642
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18645	46.609	NaN	2475	30	0	788.54	0.031				-1	 	0	38	368.7198387137291	NaN	0	368.71990966796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14054	4589	18642
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18662	46.652	NaN	2243.3	30	0	256.19	0.145				-1	 	0	68	600.2889250623906	1198.5632971915811	2	600.2904663085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14065	4595	18661
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18670	46.674	NaN	10553	30	0	606.45	0.214				-1	 	0	85	435.2508038787179	868.4870548242358	2	435.2509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14070	4598	18669
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18671	46.678	NaN	2789.7	30	0	615.97	0.106	+			51610	YYTKGFALL	9	61	538.2941643451304	1074.5737757570607	2	538.2954711914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YYTKGFALL_	ENSG00000152952|ENST00000282903|PLOD2;nc|ENSG00000152952|O00469-3|PLOD2;nc|ENSG00000152952|O00469|PLOD2;PLOD2|p.N725Mfs*11|1|0.12|ENSG00000152952|chr3:146070757-146070757|T/-|frameshift_variant	74.25504064058377	0.12238981753128622	6				NaN	NaN	0	NaN	14071	4598	18669
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18672	46.68	NaN	1822.8	30	0	1012.9	0.106	+			24178	LEPLGVLF	8	41	444.2660286245664	NaN	0	444.2659912109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LEPLGVLF_	ENSG00000117877|ENST00000309424|POLR1G;nc|ENSG00000117877|O15446-2|POLR1G	23.036711822280957	1.7418937515398478	6				NaN	NaN	0	NaN	14072	4598	18669
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18673	46.681	NaN	1166.5	30	0	301.79	0.034			+	18113	ILATGITEI	9	45	465.777587890625	NaN	0	465.777587890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ILATGITEI_	REV__tr|U7SNA9|U7SNA9_FUSNUSignalpeptidaseIOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01773PE=3SV=1	24.20275056022122	0.35506675290109213	6				NaN	NaN	0	NaN	14073	4598	18669
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18681	46.701	NaN	4721.1	30	0	924.75	0.143			+	11232	FIGLISTKI	9	61	496.31250900698274	990.6104650807655	2	496.31256103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FIGLISTKI_	REV__tr|U7SWI1|U7SWI1_FUSNUCationeffluxproteincytoplasmicdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01051PE=4SV=1	49.44154591367651	0.3095138337212152	6				NaN	NaN	0	NaN	14078	4601	18680
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18689	46.722	NaN	7577.7	30	0	973.15	0.214	+			17380	IAMATVTAL	9	57	445.75403030533033	889.4935076774607	2	445.7543029785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IAMATVTAL_	ENSG00000109107|ENST00000226253|ALDOC;ENSG00000149925|ENST00000642816|ALDOA;nc|ENSG00000149925|P04075|ALDOA	133.4690685054315	0.013543987435668854	6				NaN	NaN	0	NaN	14083	4604	18688
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18690	46.725	NaN	1306.5	30	0	156.86	0.106	+			10513	EVVTTEENI	9	51	517.2561174191662	1032.4976819051324	2	517.2568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EVVTTEENI_	ENSG00000027697|ENST00000367739|IFNGR1	25.57405402267927	0.5642445186134241	6				NaN	NaN	0	NaN	14084	4604	18688
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18691	46.727	NaN	734.32	30	0	45.658	0.106	+			41179	SVLADPKLT	9	38	472.27587890625	NaN	0	472.27587890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVLADPKLT_	ENSG00000103707|ENST00000220058|MTFMT;ENST00000560717.5_2_15:65295402-65319196:-|nuORF	29.14955571784316	0.3303970763161698	6				NaN	NaN	0	NaN	14085	4604	18688
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18692	46.729	NaN	1062.2	30	0	122.46	0.037	+			11601	FPSIYDVKY	9	50	566.291015625	NaN	0	566.291015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FPSIYDVKY_	ENSG00000155508|ENST00000285896|CNOT8;nc|ENSG00000155508|Q9UFF9-2|CNOT8;nc|ENSG00000155508|Q9UFF9-3|CNOT8	49.536043120802724	0.20989033510253738	6				NaN	NaN	0	NaN	14086	4604	18688
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18708	46.781	NaN	1947.7	30	0	178.77	0.214	+			3820	ATAIFLFTK	9	52	506.29707976785124	1010.5796066025025	2	506.2969055175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATAIFLFTK_	ENSG00000135220|ENST00000251566|UGT2A3	72.87924865735499	0.12833875048249987	6				NaN	NaN	0	NaN	14093	4613	18707
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18709	46.785	NaN	1179.1	30	0	93.492	0.106			+	13489	GLLRTYTVY	9	52	543.302978515625	NaN	0	543.302978515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GLLRTYTVY_	REV__ENSG00000077454|ENST00000310300|LRCH4;REV__ENST00000485071.2_1_7:100172732-100173215:-|nuORF	38.80614096846853	0.28164298475537564	6				NaN	NaN	0	NaN	14094	4613	18707
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18710	46.787	NaN	1109.3	30	0	151.83	0.034	+			19063	IYGSSHSW	8	53	468.7140197753906	NaN	0	468.7140197753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IYGSSHSW_	DUOX1|p.S186N|1|0.29|ENSG00000137857|chr15:45135535-45135535|G/A|missense_variant;ENSG00000137857|ENST00000389037|DUOX1;ENSG00000140279|ENST00000389039|DUOX2;nc|ENSG00000140279|Q9NRD8|DUOX2	42.47446043378293	1.7418937515398478	6				NaN	NaN	0	NaN	14095	4613	18707
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18718	46.807	NaN	1784.6	30	0	77.525	0.214				-1	 	0	58	457.2636123374955	912.512671741791	2	457.26324462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14100	4616	18717
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18719	46.81	NaN	951.55	30	0	139.78	0.035	+			50404	YAANPGQLF	9	43	490.7451903150121	979.4758276968242	2	490.7456970214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YAANPGQLF_	ENSG00000168101|ENST00000304301|NUDT16L1;nc|ENSG00000168101|Q9BRJ7-2|NUDT16L1	40.5726180659479	0.4135428067754104	6				NaN	NaN	0	NaN	14101	4616	18717
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18740	46.88	NaN	2209	30	0	253.45	0.143				-1	 	0	51	488.7943307515177	975.5741085698354	2	488.79547119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14110	4628	18739
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18746	46.898	NaN	1238.3	30	0	106	0.214				-1	 	0	55	479.2769052215546	956.5392575099092	2	479.27716064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14113	4631	18745
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18747	46.902	NaN	2320.5	30	0	516.43	0.106				-1	 	0	55	379.18002633975766	756.3454997463153	2	379.1802673339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14114	4631	18745
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18748	46.904	NaN	1442.5	30	0	135.21	0.106				-1	 	0	52	371.19058999694175	740.3666270606835	2	371.19134521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14115	4631	18745
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18749	46.906	NaN	2370.7	30	0	192.06	0.106			+	-1	TLCPGDGG	8	53	388.6660819066019	NaN	0	388.6659851074219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_TLC(Carbamidomethyl (C))PGDGG_	REV__ENSG00000146278|ENST00000336032|PNRC1;REV__nc|ENSG00000146278|Q12796-2|PNRC1;REV__PNRC1|p.K251Sfs*14|2|0.25|ENSG00000146278|chr6:89083958-89083958|A/-|frameshift_variant	20.481830146152948	1.741893751539848	6				NaN	NaN	0	NaN	14116	4631	18745
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18750	46.907	NaN	994.9	30	0	46.205	0.036	+			29184	NVIRDAVTY	9	56	525.7831263293207	NaN	0	525.7832641601562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NVIRDAVTY_	ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2	44.377184641726394	0.24544280798894275	6				NaN	NaN	0	NaN	14117	4631	18745
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18761	46.933	NaN	1319.2	30	0	171.32	0.139	+			43723	TKTGAKGG	8	40	360.20611502654157	718.3976771198832	2	360.20654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TKTGAKGG_	tr|U7T6A2|U7T6A2_FUSNUAutotransporterdomain-containingprotein(Fragment)OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00182PE=4SV=1	4.316272785109212	0.7769738875864834	6				NaN	NaN	0	NaN	14125	4634	18760
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18772	46.958	NaN	7322.3	30	0	5375.3	0.139				-1	 	0	45	368.71963701418196	735.4247210951639	2	368.71990966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14133	4637	18771
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18778	46.975	NaN	1772.8	30	0	241.47	0.215	+			13330	GKNKEPVCGY	10	56	547.7687003309065	1093.522847728613	2	547.7689819335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GKNKEPVCGY_	SLC12A3|p.R507C|1|0.56|ENSG00000070915|chr16:56880205-56880205|C/T|missense_variant	42.396135135203025	0.5270658956260207	6				NaN	NaN	0	NaN	14136	4640	18777
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18779	46.979	NaN	1172.4	30	0	70.606	0.036	+			43025	TEKTVFTVF	9	61	536.289584550056	NaN	0	536.2885131835938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEKTVFTVF_	ENSG00000165474|ENST00000382848|GJB2;ENSG00000169562|ENST00000361726|GJB1	42.396135135203025	0.2590952873412954	6				NaN	NaN	0	NaN	14137	4640	18777
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18784	46.993	NaN	1997.6	30	0	196.85	0.145			+	-1	LAPSRGSMTTY	11	72	600.2892451415128	1198.5639373498254	2	600.7924194335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LAPSRGSM(Oxidation (M))TTY_	REV__ENSG00000183317|ENST00000373048|EPHA10;REV__ENST00000446149.6_1_1:38181546-38201012:-|nuORF;REV__EPHA10|p.R869Gfs*10|1|0.12|ENSG00000183317|chr1:37719566-37719566|G/-|frameshift_variant;REV__nc|ENSG00000183317|Q5JZY3-3|EPHA10	50.033510581677724	0.4206539900604183	6				NaN	NaN	0	NaN	14139	4643	18783
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18789	47.01	NaN	6596.2	30	0	273.52	0.215				-1	 	0	73	435.2508038787179	868.4870548242358	2	435.2510681152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14141	4646	18788
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18790	47.013	NaN	1608.1	30	0	283.52	0.106	+			27419	MLADTDLRM	9	59	541.2535624025847	NaN	0	541.2536010742188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_MLADTDLRM(Oxidation (M))_	OR51B4|p.G70R|1|0.12|ENSG00000183251|chr11:5301739-5301739|C/T|missense_variant	68.78682469695295	0.1118430353446351	6				NaN	NaN	0	NaN	14142	4646	18788
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18791	47.015	NaN	1227.1	30	0	134.19	0.106	+			30286	PTISPNFNF	9	53	518.7608413816743	NaN	0	518.7605590820312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PTISPNFNF_	ENSG00000111266|ENST00000298573|DUSP16	34.172542307311794	0.30503706118289736	6				NaN	NaN	0	NaN	14143	4646	18788
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18792	47.017	NaN	1172.8	30	0	81.907	0.106			+	11238	FIIETLKM	8	53	497.7865295410156	NaN	0	497.7865295410156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FIIETLKM_	REV__ENSG00000148606|ENST00000372371|POLR3A;REV__POLR3A|p.K348Nfs*33|1|0.16|ENSG00000148606|chr10:78021864-78021864|T/-|frameshift_variant	37.15910966729921	1.7418937515398478	6				NaN	NaN	0	NaN	14144	4646	18788
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18793	47.019	NaN	1165.2	30	0	116.7	0.032			+	6827	CHVIAAVL	8	52	413.23795796243365	NaN	0	413.23785400390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_CHVIAAVL_	REV__ENSG00000172478|ENST00000388934|MAB21L4	24.504012794735996	1.7418937515398478	6				NaN	NaN	0	NaN	14145	4646	18788
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18814	47.078	NaN	1733.9	30	0	983.59	0.141			+	366	AARALRGAT	9	38	443.76433053191505	NaN	0	443.7637023925781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AARALRGAT_	REV__ENSG00000168806|ENST00000305641|LCMT2;REV__LCMT2|p.F452Lfs*11|2|0.18|ENSG00000168806|chr15:43329134-43329134|A/-|frameshift_variant	27.882242232435846	0.3367954786602879	6				NaN	NaN	0	NaN	14157	4655	18813
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18826	47.116	NaN	1323.9	30	0	108.1	0.139	+			33238	RGAAGRGG	8	42	351.19287926530365	700.3712055974073	2	351.19403076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RGAAGRGG_	ENST00000506485.1_1_5:114937968-114938790:+|nuORF;ENST00000517535.5_1_8:22422841-22423627:+|nuORF	8.822329726475273	0.7821568878176242	6				NaN	NaN	0	NaN	14163	4661	18825
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18835	47.138	NaN	1145.8	30	0	295.35	0.214	+			29632	PGFPGGVS	8	39	359.1822747459153	716.3499965586307	2	359.1827087402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PGFPGGVS_	ENSG00000180667|ENST00000315927|YOD1	19.359975847455235	0.7988239741663654	6				NaN	NaN	0	NaN	14169	4664	18834
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18836	47.142	NaN	1637.9	30	0	98.874	0.106				-1	TANCLTVTF	9	50	513.7491196797961	1025.483686426392	2	513.7498168945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_TANC(Carbamidomethyl (C))LTVTF_	ENSG00000141582|ENST00000269397|CBX4;nc|ENSG00000141582|O00257-3|CBX4	69.6276240434122	0.14239879520340665	6				NaN	NaN	0	NaN	14170	4664	18834
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18837	47.144	NaN	1861.2	30	0	155.24	0.106	+			2434	APFSKVLTF	9	54	505.2889907934504	1008.5634286537008	2	505.2894287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_APFSKVLTF_	ENSG00000120694|ENST00000320027|HSPH1;ENSG00000170606|ENST00000304858|HSPA4;HSPA4|p.S737Afs*9|1|0.18|ENSG00000170606|chr5:133103911-133103911|A/-|frameshift_variant;nc|ENSG00000120694|Q92598-2|HSPH1;nc|ENSG00000120694|Q92598-3|HSPH1;nc|ENSG00000120694|Q92598-4|HSPH1	72.87924865735499	0.12833875048249987	6				NaN	NaN	0	NaN	14171	4664	18834
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18838	47.145	NaN	947.71	30	0	81.081	0.033			+	43807	TLMLQAQP	8	42	451.24454091203637	NaN	0	451.24462890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TLMLQAQP_	REV__ENSG00000028277|ENST00000692977|POU2F2;REV__ENST00000530982.7_1_19:42603618-42636563:-|nuORF;REV__nc|ENSG00000028277|P09086-2|POU2F2;REV__nc|ENSG00000028277|P09086-3|POU2F2;REV__nc|ENSG00000028277|P09086-4|POU2F2;REV__nc|ENSG00000028277|P09086-5|POU2F2;REV__nc|ENSG00000028277|P09086|POU2F2	33.51558372728122	1.7418937515398478	6				NaN	NaN	0	NaN	14172	4664	18834
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18852	47.174	NaN	14421	30	0	1004.1	0.214				-1	 	0	89	457.2638671725835	912.513181411967	2	457.2640075683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14183	4667	18851
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18853	47.178	NaN	2558.7	30	0	218.75	0.106	+			27840	MTAAAASN	8	53	368.66765749493766	735.3207620566753	2	368.668212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MTAAAASN_	ENSG00000157637|ENST00000374759|SLC38A10;nc|ENSG00000157637|Q9HBR0-2|SLC38A10	21.9598887501803	0.7897753010812679	6				NaN	NaN	0	NaN	14184	4667	18851
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18854	47.18	NaN	3522.6	30	0	2376.8	0.106	+			48037	VSRSRAAAL	9	50	465.77736968279277	929.5401864323856	2	465.7769470214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSRSRAAAL_	nc|ENSG00000183496|Q6ZN04-3|MEX3B	21.9598887501803	0.5980208138527809	6				NaN	NaN	0	NaN	14185	4667	18851
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18855	47.182	NaN	1183.8	30	0	341.26	0.036				-1	NLLNKIQNM	9	45	552.2973526838744	1102.5801524345486	2	552.2978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_NLLNKIQNM(Oxidation (M))_	ENSG00000187715|ENST00000405109|KBTBD12	44.116797842482775	0.37197099687881774	6				NaN	NaN	0	NaN	14186	4667	18851
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18866	47.207	NaN	3338.5	30	0	483.31	0.214	+			37370	SLFNTGFLK	9	67	513.7840544808732	1025.5535560285464	2	513.7850341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLFNTGFLK_	ENSG00000121486|ENST00000367506|TRMT1L	77.31757898189308	0.1091473830098891	6				NaN	NaN	0	NaN	14194	4670	18865
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18867	47.211	NaN	1693.9	30	0	222.35	0.106	+			50624	YEALLNIKV	9	54	531.8136875688972	NaN	0	531.8140869140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YEALLNIKV_	CON__P05784;ENSG00000111057|ENST00000388835|KRT18;ENST00000397031.2_1_2:182825941-182826409:-|nuORF;ENST00000534205.1_1_11:35881882-35882566:-|nuORF;ENST00000549078.5_1_12:53344429-53346127:+|nuORF	63.53385203322761	0.134247007536971	6				NaN	NaN	0	NaN	14195	4670	18865
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18868	47.212	NaN	1779.3	30	0	186.05	0.034	+			17524	IDLLLISH	8	48	462.28098269743606	922.5474124616721	2	462.2815856933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IDLLLISH_	CPSF3|p.L74S|1|0.27|ENSG00000119203|chr2:9430760-9430760|T/C|missense_variant;ENSG00000119203|ENST00000238112|CPSF3	85.35947970620816	0.2915182781752196	6				NaN	NaN	0	NaN	14196	4670	18865
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18873	47.227	NaN	785.7	30	0	465.56	0.214	+			29522	PDVVVSAIW	9	26	329.18335591125947	NaN	0	329.1837158203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PDVVVSAIW_	ENSG00000080345|ENST00000444746|RIF1;nc|ENSG00000080345|Q5UIP0-2|RIF1;RIF1|p.E1442Gfs*4|1|0.39|ENSG00000080345|chr2:151463835-151463836|-/A|frameshift_variant;RIF1|p.K1441Rfs*18|1|0.2|ENSG00000080345|chr2:151463836-151463836|A/-|frameshift_variant;RIF1|p.K1505Rfs*18|3|0.3|ENSG00000080345|chr2:151464027-151464027|A/-|frameshift_variant;RIF1|p.S692Ffs*15|1|0.43|ENSG00000080345|chr2:151445419-151445420|-/T|frameshift_variant;RIF1|p.S692Qfs*10|1|0.13|ENSG00000080345|chr2:151445420-151445420|T/-|frameshift_variant	19.359975847455235	0.3714571876404798	6				NaN	NaN	0	NaN	14198	4673	18872
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18874	47.23	NaN	2022.5	30	0	448.76	0.031	+			30061	PQCGTYGLYT	10	52	368.16898680864216	NaN	0	368.16802978515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PQCGTYGLYT_	ENSG00000182326|ENST00000360817|C1S;ENST00000443875.5_1_12:7174318-7177952:+|nuORF	33.921630207806714	0.38879399011744475	6				NaN	NaN	0	NaN	14199	4673	18872
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18879	47.245	NaN	4073.8	30	0	240.12	0.214				-1	 	0	74	479.2769052215546	956.5392575099092	2	479.27716064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14201	4676	18878
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18880	47.248	NaN	1221.2	30	0	438.02	0.034			+	38958	SSRDLRKL	8	43	487.7906248505913	NaN	0	487.79083251953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSRDLRKL_	REV__ENST00000525316.1_1_11:47751704-47752983:-|nuORF	29.14955571784316	1.7418937515398478	6				NaN	NaN	0	NaN	14202	4676	18878
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18886	47.265	NaN	922.21	30	0	106.82	0.214	+			19039	IYFHGNEG	8	52	468.7135729049879	935.4125928767759	2	468.7138366699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IYFHGNEG_	ENSG00000189056|ENST00000428762|RELN;nc|ENSG00000189056|P78509-2|RELN;nc|ENSG00000189056|P78509-3|RELN;RELN|p.C2194Lfs*11|1|0.06|ENSG00000189056|chr7:103542822-103542823|-/TCGTAATGTATAATAG|frameshift_variant;RELN|p.H3353Tfs*46|1|0.25|ENSG00000189056|chr7:103483777-103483777|G/-|frameshift_variant	31.954861631926434	0.7126016770032289	6				NaN	NaN	0	NaN	14205	4679	18885
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18887	47.268	NaN	1440.2	30	0	104.51	0.034			+	29912	PLQGAYLAL	9	51	473.2733910911835	NaN	0	473.2724304199219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PLQGAYLAL_	REV__ENSG00000143851|ENST00000691036|PTPN7;REV__nc|ENSG00000143851|P35236-2|PTPN7;REV__nc|ENSG00000143851|P35236-3|PTPN7	57.81127852772723	0.15865383123342353	6				NaN	NaN	0	NaN	14206	4679	18885
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18891	47.282	NaN	1343.8	30	0	156.23	0.145			+	-1	KAGTWECLY	9	52	564.2625599473039	1126.5105669614077	2	564.263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_KAGTWEC(Carbamidomethyl (C))LY_	REV__nc|ENSG00000155629|Q6ZUJ8-3|PIK3AP1	35.61828744233558	0.47037581924408073	6				NaN	NaN	0	NaN	14207	4682	18890
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18898	47.302	NaN	1087.1	30	0	141.38	0.144			+	29937	PMICVSQTM	9	51	549.7354996543721	1097.4564463755441	2	549.7350463867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),2 Oxidation (M)	_PM(Oxidation (M))IC(Carbamidomethyl (C))VSQTM(Oxidation (M))_	REV__ENST00000209873.8_1_12:53708220-53708565:-|nuORF	47.657333605630114	0.33044192980041115	6				NaN	NaN	0	NaN	14211	4685	18897
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18904	47.319	NaN	1298.6	30	0	143.95	0.143			+	-1	WGCLLSHGS	9	51	508.73486842501933	NaN	0	508.73443603515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_WGC(Carbamidomethyl (C))LLSHGS_	REV__ENSG00000160298|ENST00000291691|C21orf58;REV__nc|nan|P58505-2|C21orf58	38.80614096846853	0.28164298475537564	6				NaN	NaN	0	NaN	14214	4688	18903
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18909	47.336	NaN	2089.7	30	0	216.07	0.145			+	23624	LAPSRGSMTTY	11	58	600.2892451415128	1198.5639373498254	2	600.2905883789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LAPSRGSM(Oxidation (M))TTY_	REV__ENSG00000183317|ENST00000373048|EPHA10;REV__ENST00000446149.6_1_1:38181546-38201012:-|nuORF;REV__EPHA10|p.R869Gfs*10|1|0.12|ENSG00000183317|chr1:37719566-37719566|G/-|frameshift_variant;REV__nc|ENSG00000183317|Q5JZY3-3|EPHA10	48.601550744091256	0.44024757269956427	6				NaN	NaN	0	NaN	14216	4691	18908
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18914	47.353	NaN	1823	30	0	111.26	0.141				-1	 	0	55	435.2508038787179	868.4870548242358	2	435.2508239746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14218	4694	18913
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18923	47.386	NaN	2468.8	30	0	261.83	0.214	+			28466	NFTNVAATF	9	55	492.74238502726945	983.4702171213389	2	492.7423400878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NFTNVAATF_	ENSG00000131473|ENST00000352035|ACLY;ENST00000588547.1_1_17:40060903-40061877:-|nuORF;nc|ENSG00000131473|P53396-2|ACLY	72.87924865735499	0.12833875048249987	6				NaN	NaN	0	NaN	14221	4700	18922
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18924	47.389	NaN	1138.7	30	0	111.8	0.106	+			6272	AVSNSFLAY	9	49	486.24465430330497	NaN	0	486.24517822265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVSNSFLAY_	EDC4|p.D801Mfs*15|1|0.26|ENSG00000038358|chr16:67880857-67880857|G/-|frameshift_variant;EDC4|p.Q792Sfs*24|1|0.37|ENSG00000038358|chr16:67880829-67880829|C/-|frameshift_variant;ENSG00000038358|ENST00000358933|EDC4;ENST00000536072.6_1_16:67909906-67914140:+|nuORF;ENST00000572221.5_1_16:67909733-67911757:+|nuORF	68.78682469695295	0.1118430353446351	6				NaN	NaN	0	NaN	14222	4700	18922
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18925	47.391	NaN	1465.7	30	0	417.61	0.037			+	21806	KRAREVAASI	10	46	367.55728726577416	NaN	0	367.5567321777344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KRAREVAASI_	REV__ENSG00000117523|ENST00000647382|PRRC2C;REV__nc|ENSG00000117523|Q9Y520-2|PRRC2C;REV__nc|ENSG00000117523|Q9Y520-3|PRRC2C;REV__nc|ENSG00000117523|Q9Y520-4|PRRC2C;REV__nc|ENSG00000117523|Q9Y520-5|PRRC2C;REV__nc|ENSG00000117523|Q9Y520-6|PRRC2C;REV__nc|ENSG00000117523|Q9Y520|PRRC2C;REV__PRRC2C|p.K1018Nfs*7|1|0.21|ENSG00000117523|chr1:171540521-171540521|A/-|frameshift_variant;REV__PRRC2C|p.K551Nfs*17|1|0.23|ENSG00000117523|chr1:171532743-171532743|A/-|frameshift_variant;REV__PRRC2C|p.P2791Lfs*5|1|0.1|ENSG00000117523|chr1:171591761-171591761|C/-|frameshift_variant	32.75053402867276	0.3926392905881664	6				NaN	NaN	0	NaN	14223	4700	18922
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18942	47.445	NaN	1126	30	0	93.196	0.143	+			1473	AFLKVSSVF	9	45	499.2890928239663	996.5636327147326	2	499.29022216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AFLKVSSVF_	ENSG00000100401|ENST00000356244|RANGAP1	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	14231	4709	18941
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18947	47.461	NaN	1644.2	30	0	148.87	0.143	+			47191	VLVPPVPHQ	9	50	493.29475789175365	NaN	0	493.294189453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VLVPPVPHQ_	GSC|p.S129P|1|0.17|ENSG00000133937|chr14:94769188-94769188|A/G|missense_variant	35.200714571348534	0.2998460331538257	6				NaN	NaN	0	NaN	14233	4712	18946
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18959	47.51	NaN	14068	30	0	763.37	0.142				-1	 	0	86	457.2638671725835	912.513181411967	2	457.2640686035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14236	4721	18958
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18966	47.53	NaN	2387.5	30	0	1510.6	0.214	+			26878	LWLLVLCA	8	53	465.77736968279277	929.5401864323856	2	465.7773742675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LWLLVLCA_	DHRS7|p.D104Ifs*9|1|0.26|ENSG00000100612|chr14:60154043-60154043|T/-|frameshift_variant;DHRS7|p.D149Ifs*2|1|0.07|ENSG00000100612|chr14:60153127-60153128|-/ATAT|frameshift_variant;ENSG00000100612|ENST00000557185|DHRS7;ENST00000555171.1_1_14:60622706-60632135:-|nuORF;ENST00000556502.1_1_14:60619584-60632027:-|nuORF	16.704963439144045	0.7946246187734944	6				NaN	NaN	0	NaN	14240	4724	18965
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18967	47.533	NaN	1858.4	30	0	164.29	0.106			+	-1	EMSAQSCPNI	10	67	568.7406479700691	1135.466743006938	2	568.7413940429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_EMSAQSC(Carbamidomethyl (C))PNI_	REV__DRC1|p.K565N|1|0.09|ENSG00000157856|chr2:26453325-26453325|G/T|missense_variant	45.97224482568171	0.49411383603842696	6				NaN	NaN	0	NaN	14241	4724	18965
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18968	47.535	NaN	1587.1	30	0	244.72	0.035				-1	 	0	53	508.81007577224653	1015.6055986112931	2	508.8126525878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14242	4724	18965
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18980	47.569	NaN	1834.4	30	0	168.5	0.143	+			43386	TGFSSLFLK	9	57	500.27848414425983	998.5424153553197	2	500.27911376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TGFSSLFLK_	ENSG00000164880|ENST00000404767|INTS1	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	14248	4730	18979
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18987	47.59	NaN	1466.2	30	0	67.73	0.142	+			24138	LEKVQRAN	8	62	479.27700993068623	956.5394669281725	2	479.2780456542969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LEKVQRAN_	ADCYAP1R1|p.I38V|1|0.09|ENSG00000078549|chr7:31064891-31064891|A/G|missense_variant	35.61828744233558	0.6843154725607303	6				NaN	NaN	0	NaN	14252	4733	18986
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18999	47.638	NaN	1836.2	30	0	466.9	0.144			+	-1	FVFYMQTM	8	51	549.7354996543721	1097.4564463755441	2	549.7360229492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_FVFYM(Oxidation (M))QTM(Oxidation (M))_	REV__ENSG00000172640|ENST00000310248|OR10AD1	50.0245360154114	0.5941082100236891	6				NaN	NaN	0	NaN	14255	4742	18998
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19006	47.658	NaN	3173.2	30	0	1248.6	0.143				-1	 	0	53	495.28293649357767	988.5513200539554	2	495.2834777832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14259	4745	19005
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19013	47.678	NaN	1872.6	30	0	165.24	0.213	+			49832	VYSRYFTTY	9	70	600.2892967944414	1198.5640406556827	2	600.2904663085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	101.25262130126117	0.03792372629710479	6				NaN	NaN	0	NaN	14263	4748	19012
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19014	47.682	NaN	1396.1	30	0	112.83	0.035	+			10048	ESDRIRLL	8	67	501.2899048395665	1000.565256745933	2	501.2903137207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ESDRIRLL_	ENST00000475815.5_1_2:36783274-36783475:-|nuORF	39.252832667884924	0.6609488554722044	6				NaN	NaN	0	NaN	14264	4748	19012
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19018	47.697	NaN	853.73	30	0	68.722	0.141	+			20765	KHKKQSGG	8	44	435.25109437257925	NaN	0	435.251220703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KHKKQSGG_	tr|U7T5K0|U7T5K0_FUSNUelongationfactorGOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00176PE=3SV=1	24.20275056022122	1.7418937515398478	6				NaN	NaN	0	NaN	14265	4751	19017
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19042	47.773	NaN	1647.6	30	0	262.85	0.214			+	16658	HIHICLAVM	9	50	526.773983540954	1051.5334141487078	2	527.2760009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_HIHICLAVM(Oxidation (M))_	REV__ENST00000523214.5_1_8:125500837-125516518:-|nuORF	49.21078951299608	0.3122205139198386	6				NaN	NaN	0	NaN	14277	4763	19041
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19043	47.777	NaN	884.31	30	0	122.33	0.035	+			47298	VNLVPPSGPK	10	47	504.2973327636719	NaN	0	504.2973327636719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VNLVPPSGPK_	ENST00000341084.6_1_8:101271265-101271364:-|nuORF	25.57405402267927	0.4162033004763879	6				NaN	NaN	0	NaN	14278	4763	19041
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19062	47.858	NaN	6218.7	30	0	312.08	0.142				-1	 	0	79	457.2638671725835	912.513181411967	2	457.2646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14282	4778	19061
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19067	47.875	NaN	3598.9	30	0	617.67	0.214				-1	 	0	63	508.81007577224653	1015.6055986112931	2	508.8111877441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14284	4781	19066
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19068	47.878	NaN	1535.3	30	0	678.07	0.034			+	47695	VSEKVGRR	8	50	465.77736968279277	929.5401864323856	2	465.7774353027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSEKVGRR_	REV__ENSG00000048028|ENST00000696973|USP28;REV__ENST00000540438.5_1_11:113669964-113691034:-|nuORF;REV__nc|ENSG00000048028|Q96RU2-2|USP28;REV__nc|ENSG00000048028|Q96RU2|USP28	19.359975847455235	0.7988239741663654	6				NaN	NaN	0	NaN	14285	4781	19066
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19093	47.965	NaN	1175.8	30	0	47.029	0.214				-1	 	0	64	479.27700993068623	956.5394669281725	2	479.2783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14295	4796	19092
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19094	47.969	NaN	1836.3	30	0	152.66	0.036	+			19067	IYGYVAEQF	9	62	545.2660264695569	1088.5175000059137	2	545.2679443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IYGYVAEQF_	ENSG00000114902|ENST00000619898|SPCS1;ENST00000448693.2_1_3:52740223-52740934:+|nuORF;nc|ENSG00000114902|Q9Y6A9|SPCS1	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	14296	4796	19092
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19103	47.99	NaN	1916	30	0	578.91	0.214			+	27180	MDQACLLTM	9	57	549.7354996543721	1097.4564463755441	2	549.73681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_MDQAC(Carbamidomethyl (C))LLTM(Oxidation (M))_	REV__nc|ENSG00000253188|A0A0A0MS04|TRBV6-7;REV__nc|ENSG00000283063|P0DPF7|TRBV6-3	56.72105179125745	0.24094814563026265	6				NaN	NaN	0	NaN	14302	4799	19102
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19104	47.994	NaN	1064.8	30	0	242.53	0.036				-1	QHATQQQQM	9	54	558.2494088753898	NaN	0	558.2493896484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_QHATQQQQM(Oxidation (M))_	ENSG00000138756|ENST00000502613|BMP2K;nc|ENSG00000138756|Q9NSY1-2|BMP2K;nc|ENSG00000138756|Q9NSY1-3|BMP2K	35.61828744233558	0.29773779453147337	6				NaN	NaN	0	NaN	14303	4799	19102
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19115	48.028	NaN	1698.7	30	0	144.2	0.143			+	29211	NVRDKLVAS	9	67	501.2902181600634	1000.5658833869268	2	501.2903747558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NVRDKLVAS_	REV__CKAP2L|p.T478Pfs*15|1|0.25|ENSG00000169607|chr2:112752437-112752437|T/-|frameshift_variant;REV__CKAP2L|p.T618Lfs*3|1|0.37|ENSG00000169607|chr2:112740978-112740978|T/-|frameshift_variant;REV__ENSG00000169607|ENST00000302450|CKAP2L;REV__nc|ENSG00000169607|Q8IYA6-3|CKAP2L	31.634271133179894	0.507608568980346	6				NaN	NaN	0	NaN	14308	4805	19114
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19121	48.046	NaN	2219.8	30	0	363.92	0.214	+			14940	GTMEWIMIK	9	56	554.779774122837	1107.544995312474	2	554.7822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTMEWIMIK_	ENSG00000168273|ENST00000477703|UQCC5	69.6276240434122	0.14239879520340665	6				NaN	NaN	0	NaN	14311	4808	19120
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19122	48.05	NaN	1897.3	30	0	157.59	0.106	+			49833	VYSRYFTTY	9	62	600.2895873323791	1198.5646217315582	2	600.2916870117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	87.69643885390035	0.07135982304947239	6				NaN	NaN	0	NaN	14312	4808	19120
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19123	48.052	NaN	1517.1	30	0	181.44	0.035	+			40949	SVFVATFLR	9	55	520.300199370328	1038.5858458074558	2	520.3008422851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVFVATFLR_	ENSG00000099194|ENST00000370355|SCD	96.66504779109242	0.04607440320619715	6				NaN	NaN	0	NaN	14313	4808	19120
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19140	48.105	NaN	2085.7	30	0	256.54	0.144			+	51463	YVGLGAGYFL	10	62	530.2795069409752	1058.5444609487504	2	530.2797241210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YVGLGAGYFL_	REV__ENSG00000170923|ENST00000641081|OR7G2	44.53106598305862	0.5073935772121767	6				NaN	NaN	0	NaN	14321	4817	19139
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19152	48.143	NaN	1133.5	30	0	254.86	0.144	+			1903	AIPELHVTK	9	47	504.29804934763683	NaN	0	504.26336669921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AIPELHVTK_	ENSG00000165171|ENST00000297873|METTL27	30.317721548370564	0.32449924987115025	6				NaN	NaN	0	NaN	14327	4823	19151
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19172	48.204	NaN	3542.9	30	0	157.91	0.214				-1	 	0	66	457.2638671725835	912.513181411967	2	457.26446533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14338	4832	19171
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19173	48.208	NaN	1204.1	30	0	606.54	0.034	+			20414	KETNKAKR	8	33	487.7901262271617	973.5656995211234	2	487.7907409667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KETNKAKR_	RPGRIP1L|p.N1213T|1|0.05|ENSG00000103494|chr16:53611030-53611030|T/G|missense_variant	18.324413293986947	0.7971860551947066	6				NaN	NaN	0	NaN	14339	4832	19171
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19180	48.226	NaN	1882.9	30	0	179.07	0.214			+	1464	AFGPVHPPVD	10	52	518.2664203957634	1034.5182878583266	2	518.2672119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AFGPVHPPVD_	REV__sp|F5HH39|UL21A_HCMVMUncharacterizedproteinUL21AOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL21APE=3SV=1;REV__sp|Q7M6R1|UL21A_HCMVAUncharacterizedproteinUL21AOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL21APE=3SV=1	38.80614096846853	0.5601458937078225	6				NaN	NaN	0	NaN	14343	4835	19179
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19181	48.23	NaN	1733.2	30	0	162.18	0.106				-1	 	0	50	393.2041970690582	784.3938412049164	2	393.2044677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14344	4835	19179
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19182	48.231	NaN	1640.8	30	0	123.59	0.106	+			49923	VYVEKISFL	9	61	549.3152971521093	1096.6160413710186	2	549.3160400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYVEKISFL_	ENSG00000171017|ENST00000306708|LRRC8E;LRRC8E|p.P454Rfs*33|1|0.35|ENSG00000171017|chr19:7899878-7899878|C/-|frameshift_variant	54.722347961057174	0.257609425301511	6				NaN	NaN	0	NaN	14345	4835	19179
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19183	48.233	NaN	1838.2	30	0	200.54	0.032			+	27166	MDEPKSGG	8	48	410.6784380398917	819.3423231465835	2	410.67926025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MDEPKSGG_	REV__ENSG00000173064|ENST00000682272|HECTD4;REV__HECTD4|p.A4187Pfs*44|1|0.07|ENSG00000173064|chr12:112163201-112163201|C/-|frameshift_variant;REV__nc|ENSG00000173064|Q9Y4D8-4|HECTD4;REV__nc|ENSG00000173064|Q9Y4D8|HECTD4	29.14955571784316	0.7342621283720113	6				NaN	NaN	0	NaN	14346	4835	19179
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19190	48.251	NaN	1708.7	30	0	236.73	0.214				-1	 	0	44	401.1930529993116	800.3715530654232	2	401.1932373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14350	4838	19189
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19191	48.255	NaN	1522.6	30	0	276.52	0.034			+	28454	NFFQQGAL	8	50	462.7315959458216	NaN	0	462.7309265136719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NFFQQGAL_	REV__ENSG00000135111|ENST00000349155|TBX3;REV__nc|ENSG00000135111|O15119|TBX3;REV__TBX3|p.K714Rfs*15|1|0.12|ENSG00000135111|chr12:114671931-114671932|TT/-|frameshift_variant	62.97842346883844	1.7418937515398478	6				NaN	NaN	0	NaN	14351	4838	19189
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19203	48.29	NaN	1535.1	30	0	71.265	0.144	+			29185	NVIRDAVTY	9	64	525.7835514892128	NaN	0	525.7837524414062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NVIRDAVTY_	ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2	47.657333605630114	0.2228375344433429	6				NaN	NaN	0	NaN	14357	4844	19202
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19207	48.307	NaN	13011	30	0	1013.3	0.142				-1	 	0	96	479.27696510489886	956.5393772765977	2	479.2771911621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14358	4847	19206
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19220	48.347	NaN	1219.5	30	0	143.83	0.214				-1	LLGCLNSGTSF	11	49	584.7847949653271	1167.5550369974542	2	584.7857666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_LLGC(Carbamidomethyl (C))LNSGTSF_	ENSG00000131389|ENST00000622186|SLC6A6	38.753607047826485	0.5749975102143227	6				NaN	NaN	0	NaN	14365	4853	19219
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19221	48.35	NaN	1470.1	30	0	205.59	0.035	+			29763	PHVSLFVGGL	10	55	513.2928353305394	NaN	0	513.2933959960938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PHVSLFVGGL_	ENSG00000145214|ENST00000273814|DGKQ	55.50420428727701	0.270804100254592	6				NaN	NaN	0	NaN	14366	4853	19219
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19227	48.365	NaN	2059.1	30	0	94.479	0.143			+	25015	LLGLTRSQN	9	69	501.2902181600634	1000.5658833869268	2	501.2901916503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LLGLTRSQN_	REV__ENST00000561370.5_1_14:68048786-68054020:+|nuORF	31.529811441608018	0.5085848003137583	6				NaN	NaN	0	NaN	14369	4856	19226
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19234	48.385	NaN	2004.1	30	0	242.31	0.213	+			49834	VYSRYFTTY	9	58	600.2895873323791	1198.5646217315582	2	600.2905883789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	75.04331003522576	0.118981335847003	6				NaN	NaN	0	NaN	14373	4859	19233
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19235	48.389	NaN	904.07	30	0	182.48	0.035	+			11539	FPFVNLKVG	9	43	510.7959899902344	NaN	0	510.7959899902344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FPFVNLKVG_	ENST00000502489.5_1_5:31983264-32077762:+|nuORF	19.359975847455235	0.3714571876404798	6				NaN	NaN	0	NaN	14374	4859	19233
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19247	48.425	NaN	2199	30	0	217.36	0.214	+			25303	LPAKILVEF	9	60	515.3201292642657	1028.6257055953313	2	515.3207397460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LPAKILVEF_	ENSG00000122952|ENST00000373944|ZWINT;nc|ENSG00000122952|O95229-2|ZWINT	85.16082228582465	0.07850854922700509	6				NaN	NaN	0	NaN	14380	4865	19246
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19248	48.428	NaN	1580.4	30	0	156.95	0.031	+			32766	RARAASGG	8	50	373.20669488397544	744.3988368347509	2	373.70794677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RARAASGG_	ENST00000540593.5_2_14:74353484-74358736:+|nuORF;ENST00000555730.5_2_14:74353484-74360551:+|nuORF	17.364965105453717	0.7956685240855921	6				NaN	NaN	0	NaN	14381	4865	19246
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19254	48.444	NaN	983.65	30	0	110.02	0.14			+	30298	PTLGAATM	8	36	381.19542454980893	NaN	0	381.1956787109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PTLGAATM_	REV__CARD11|p.R555Gfs*45|6|0.44|ENSG00000198286|chr7:2928689-2928689|G/-|frameshift_variant	26.79610172149135	1.7418937515398478	6				NaN	NaN	0	NaN	14384	4868	19253
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19260	48.462	NaN	1763	30	0	118.06	0.14	+			13634	GMLATSSN	8	52	390.68190395520804	NaN	0	390.6814270019531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GMLATSSN_	ENSG00000198176|ENST00000375370|TFDP1;ENST00000544902.5_1_13:114277566-114294579:+|nuORF;nc|ENSG00000198176|Q14186-2|TFDP1	20.481830146152948	1.741893751539848	6				NaN	NaN	0	NaN	14387	4871	19259
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19270	48.497	NaN	1392.8	30	0	88	0.139			+	-1	PSPLRAMVPH	10	51	374.2014028913844	NaN	0	374.2015380859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_PSPLRAM(Oxidation (M))VPH_	REV__ENSG00000197321|ENST00000355867|SVIL;REV__nc|ENSG00000197321|O95425-3|SVIL;REV__SVIL|p.M1863Dfs*18|1|0.28|ENSG00000197321|chr10:29471186-29471187|-/C|frameshift_variant;REV__SVIL|p.M1863Wfs*44|8|0.39|ENSG00000197321|chr10:29471187-29471187|C/-|frameshift_variant;REV__SVIL|p.N2095Kfs*36|1|0.25|ENSG00000197321|chr10:29462394-29462395|-/T|frameshift_variant	23.52269567125451	0.42010282974921537	6				NaN	NaN	0	NaN	14391	4877	19269
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19283	48.546	NaN	1752.1	30	0	979.3	0.214			+	19786	KEANRKKT	8	44	487.7901262271617	973.5656995211234	2	487.7904357910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEANRKKT_	REV__ENSG00000175395|ENST00000302609|ZNF25;REV__nc|ENSG00000175395|P17030-2|ZNF25	17.364965105453717	0.7956685240855921	6				NaN	NaN	0	NaN	14395	4886	19282
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19284	48.549	NaN	1758.2	30	0	158.96	0.036				-1	RIGGIAMIY	9	65	526.2835173826319	1050.5524818320637	2	526.282958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))RIGGIAM(Oxidation (M))IY_	ENST00000469433.5_1_9:109695050-109697819:+|nuORF	50.0245360154114	0.3026755932229825	6				NaN	NaN	0	NaN	14396	4886	19282
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19296	48.584	NaN	1699.3	30	0	130.95	0.214	+			34969	SAAMVFSAL	9	52	456.7279100371434	911.4412671410868	2	456.7286071777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_SAAM(Oxidation (M))VFSAL_	ENSG00000185883|ENST00000330398|ATP6V0C	74.25504064058377	0.12238981753128622	6				NaN	NaN	0	NaN	14402	4892	19295
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19297	48.587	NaN	854.33	30	0	273.13	0.036			+	-1	EEFSMKTID	9	36	558.2483520507812	NaN	0	558.2483520507812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_EEFSM(Oxidation (M))KTID_	REV__ENSG00000121446|ENST00000294854|RGSL1;REV__nc|ENSG00000121446|A5PLK6-2|RGSL1;REV__nc|ENSG00000121446|A5PLK6-5|RGSL1	21.9598887501803	0.3626577482100488	6				NaN	NaN	0	NaN	14403	4892	19295
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19313	48.639	NaN	957.36	30	0	72.851	0.145	+			31808	QPNPEARLRRA	11	54	654.3673706054688	NaN	0	654.3673706054688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QPNPEARLRRA_	ENSG00000078246|ENST00000448120|TULP3;nc|ENSG00000078246|O75386-2|TULP3;nc|ENSG00000078246|O75386-3|TULP3	20.030474535948922	0.456735970842152	6				NaN	NaN	0	NaN	14410	4901	19312
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19321	48.661	NaN	8556.7	30	0	630.5	0.142				-1	 	0	89	479.27696510489886	956.5393772765977	2	479.2772521972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14415	4904	19320
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19332	48.688	NaN	3186	30	0	370.93	0.142	+			28178	NAPLVNVTL	9	50	470.77632108330386	939.5380892334077	2	470.77655029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAPLVNVTL_	ENSG00000216490|ENST00000407280|IFI30;ENST00000600463.1_1_19:18285864-18288180:+|nuORF	85.16082228582465	0.07850854922700509	6				NaN	NaN	0	NaN	14423	4907	19331
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19338	48.705	NaN	1814.6	30	0	83.232	0.214			+	14886	GTLRLVAASN	10	62	501.290023052983	1000.565493172766	2	501.29052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTLRLVAASN_	REV__ENSG00000204120|ENST00000373563|GIGYF2;REV__ENST00000463554.5_1_2:233599907-233635753:+|nuORF;REV__GIGYF2|p.A735Yfs*90|1|0.05|ENSG00000204120|chr2:232815731-232815732|-/TACACACATG|frameshift_variant;REV__GIGYF2|p.L491Ffs*6|1|0.38|ENSG00000204120|chr2:232794934-232794935|-/T|frameshift_variant;REV__GIGYF2|p.L631*|1|0.4|ENSG00000204120|chr2:232809801-232809801|T/-|frameshift_variant;REV__GIGYF2|p.L640Wfs*27|1|0.5|ENSG00000204120|chr2:232811261-232811261|T/-|frameshift_variant;REV__nc|ENSG00000204120|Q6Y7W6-3|GIGYF2;REV__nc|ENSG00000204120|Q6Y7W6-4|GIGYF2;REV__nc|ENSG00000204120|Q6Y7W6-5|GIGYF2	34.08650109265054	0.601467140718965	6				NaN	NaN	0	NaN	14426	4910	19337
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19339	48.709	NaN	1056.1	30	0	179.91	0.036	+			28525	NIEGAVLIFL	10	60	544.8212077553726	NaN	0	544.82080078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NIEGAVLIFL_	ENSG00000067248|ENST00000251636|DHX29;ENST00000504778.5_1_5:54552318-54579000:-|nuORF;ENST00000513447.1_1_5:54569247-54572159:-|nuORF	32.81241826257853	0.3924360933802784	6				NaN	NaN	0	NaN	14427	4910	19337
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19343	48.724	NaN	2778.1	30	0	451.84	0.214	+			42156	SYSMIVNNL	9	61	520.7573497663126	1039.500146599425	2	520.7590942382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SYSMIVNNL_	CACYBP|p.V145Sfs*22|1|0.25|ENSG00000116161|chr1:175007191-175007191|A/-|frameshift_variant;ENSG00000116161|ENST00000367679|CACYBP;ENST00000469173.1_1_1:174976108-174977843:+|nuORF;ENST00000473925.1_1_1:174969094-174977843:+|nuORF;nc|ENSG00000116161|Q9HB71-3|CACYBP	53.351449002276354	0.2690372970092375	6				NaN	NaN	0	NaN	14428	4913	19342
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19344	48.727	NaN	1535.6	30	0	174.77	0.038	+			49835	VYSRYFTTY	9	56	600.2893540893004	1198.5641552454008	2	600.7922973632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	14429	4913	19342
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19355	48.761	NaN	890.26	30	0	89.395	0.143			+	33289	RGLVEAPDPP	10	50	525.7817993164062	NaN	0	525.7817993164062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RGLVEAPDPP_	REV__ENST00000395784.1_1_5:96272371-96272563:+|nuORF	21.9598887501803	0.4201028297492154	6				NaN	NaN	0	NaN	14434	4919	19354
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19359	48.778	NaN	1488.9	30	0	171.59	0.214	+			19112	IYKTSILVF	9	59	542.3255902668293	1082.6366276004585	2	542.8280029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IYKTSILVF_	ENSG00000124784|ENST00000379834|RIOK1;ENST00000264874.7_1_6:7397003-7402949:+|nuORF;RIOK1|p.E533Rfs*20|1|0.19|ENSG00000124784|chr6:7414384-7414385|-/A|frameshift_variant	51.33545320467046	0.2872990594074956	6				NaN	NaN	0	NaN	14435	4922	19358
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19360	48.782	NaN	1739.4	30	0	164.58	0.036	+			32609	QYMNTVVNF	9	62	558.2644191942595	NaN	0	558.2642822265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QYMNTVVNF_	nc|ENSG00000134291|Q9BVX2-2|TMEM106C	85.16082228582465	0.053699699744190164	6				NaN	NaN	0	NaN	14436	4922	19358
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19366	48.798	NaN	2693.6	30	0	482.37	0.141	+			43522	TGTGTLLLI	9	45	444.7732785391608	887.5320041451216	2	444.77392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TGTGTLLLI_	ENSG00000039068|ENST00000261769|CDH1;ENST00000562836.5_1_16:68797408-68867399:+|nuORF;nc|ENSG00000039068|P12830-2|CDH1	97.47269410471826	0.04379738608259218	6				NaN	NaN	0	NaN	14439	4925	19365
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19377	48.825	NaN	1701.4	30	0	203.4	0.144	+			19113	IYKTSILVF	9	65	542.3255902668293	1082.6366276004585	2	542.3265380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IYKTSILVF_	ENSG00000124784|ENST00000379834|RIOK1;ENST00000264874.7_1_6:7397003-7402949:+|nuORF;RIOK1|p.E533Rfs*20|1|0.19|ENSG00000124784|chr6:7414384-7414385|-/A|frameshift_variant	42.396135135203025	0.392153681582562	6				NaN	NaN	0	NaN	14447	4928	19376
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19383	48.842	NaN	663.64	30	0	36.878	0.144	+			23524	LAHTYLKSL	9	50	523.3035278320312	NaN	0	523.3035278320312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LAHTYLKSL_	LRRC74B|p.D192Y|1|0.06|ENSG00000187905|chr22:21049109-21049109|G/T|missense_variant	21.9598887501803	0.3626577482100488	6				NaN	NaN	0	NaN	14450	4931	19382
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19387	48.859	NaN	2345.8	30	0	671.81	0.214			+	50585	YDCLVVLLL	9	58	525.8000764505801	1049.5855999679602	2	525.80029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YDCLVVLLL_	REV__ENSG00000136114|ENST00000258613|THSD1;REV__nc|ENSG00000136114|Q9NS62-2|THSD1;REV__nc|ENSG00000136114|Q9NS62-3|THSD1	45.9519527083369	0.35044536499095585	6				NaN	NaN	0	NaN	14451	4934	19386
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19388	48.862	NaN	698.86	30	0	67.004	0.033			+	25571	LQEALALL	8	35	435.76817405352557	NaN	0	435.7682800292969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LQEALALL_	REV__ENSG00000105568|ENST00000322088|PPP2R1A;REV__ENSG00000137713|ENST00000527614|PPP2R1B;REV__ENST00000468280.5_1_19:52693376-52714746:+|nuORF;REV__nc|ENSG00000137713|P30154-2|PPP2R1B;REV__nc|ENSG00000137713|P30154-4|PPP2R1B;REV__nc|ENSG00000137713|P30154-5|PPP2R1B	50.0245360154114	1.7418937515398478	6				NaN	NaN	0	NaN	14452	4934	19386
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19392	48.877	NaN	1010.8	30	0	142.74	0.143	+			25453	LPQGPLGTSF	10	51	508.7747253841949	NaN	0	508.7739562988281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LPQGPLGTSF_	ENSG00000265972|ENST00000582401|TXNIP;nc|ENSG00000265972|Q9H3M7-2|TXNIP	45.97224482568171	0.33106653400957564	6				NaN	NaN	0	NaN	14453	4937	19391
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19398	48.895	NaN	901.91	30	0	57.942	0.214				-1	RKAQCPIVERL	11	50	457.2638667031523	NaN	0	457.2636413574219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_RKAQC(Carbamidomethyl (C))PIVERL_	ENSG00000083845|ENST00000196551|RPS5;ENST00000598807.1_1_19:58899504-58905010:+|nuORF	23.37791116691581	0.456735970842152	6				NaN	NaN	0	NaN	14456	4940	19397
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19399	48.899	NaN	758.67	30	0	97.853	0.106			+	-1	IIGCPFFVFI	10	41	606.8259833554949	1211.6374137777898	2	606.8274536132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_IIGC(Carbamidomethyl (C))PFFVFI_	REV__ENST00000522596.6_1_3:169513152-169513446:-|nuORF	19.359975847455235	0.718073418909716	6				NaN	NaN	0	NaN	14457	4940	19397
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19400	48.901	NaN	914.87	30	0	123.56	0.034	+			19064	IYGSSHSW	8	45	468.7142333984375	NaN	0	468.7142333984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IYGSSHSW_	DUOX1|p.S186N|1|0.29|ENSG00000137857|chr15:45135535-45135535|G/A|missense_variant;ENSG00000137857|ENST00000389037|DUOX1;ENSG00000140279|ENST00000389039|DUOX2;nc|ENSG00000140279|Q9NRD8|DUOX2	35.200714571348534	1.7418937515398478	6				NaN	NaN	0	NaN	14458	4940	19397
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19407	48.917	NaN	1315.1	30	0	840.87	0.142	+			21822	KRETKAKN	8	42	487.7903876384929	973.5662223437859	2	487.79119873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KRETKAKN_	ENST00000492798.1_1_9:136217794-136218218:+|nuORF	21.9598887501803	0.7897753010812679	6				NaN	NaN	0	NaN	14462	4943	19406
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19430	49.001	NaN	3298.9	30	0	218.56	0.142				-1	 	0	73	479.27696510489886	956.5393772765977	2	479.27728271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14470	4958	19429
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19445	49.053	NaN	2741.6	30	0	476.59	0.144	+			43804	TLLVWTLSK	9	59	530.8237312070893	1059.6329094809785	2	530.8248291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TLLVWTLSK_	ENST00000554362.5_1_14:71867533-71996066:+|nuORF;ENST00000555652.5_1_14:71880716-71996066:+|nuORF	98.58198989935565	0.04066992115528678	6				NaN	NaN	0	NaN	14476	4967	19444
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19455	49.087	NaN	2175.7	30	0	247.81	0.213	+			49836	VYSRYFTTY	9	69	600.2893540893004	1198.5641552454008	2	600.2915649414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	76.16968421966216	0.11411088698345859	6				NaN	NaN	0	NaN	14480	4973	19454
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19456	49.091	NaN	1163.6	30	0	162.72	0.038			+	8066	DVKKNHDRDL	10	61	620.3283081054688	NaN	0	620.3283081054688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DVKKNHDRDL_	REV__CON__Q86YZ3;REV__ENSG00000197915|ENST00000368801|HRNR;REV__HRNR|p.P307Lfs*278|1|0.44|ENSG00000197915|chr1:152220711-152220711|A/-|frameshift_variant	31.634271133179894	0.39630454568332174	6				NaN	NaN	0	NaN	14481	4973	19454
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19477	49.171	NaN	1685.6	30	0	145.62	0.143			+	35182	SAIKRALNE	9	67	501.29020684090995	1000.5658607486199	2	501.2899169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAIKRALNE_	REV__ENSG00000176101|ENST00000322310|SSNA1;REV__ENST00000459860.1_1_9:140083297-140084363:+|nuORF	32.75053402867276	0.49717649897795874	6				NaN	NaN	0	NaN	14487	4988	19476
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19481	49.188	NaN	1667.5	30	0	81.388	0.143			+	19592	KDEKKGNKV	9	66	523.3036561764236	1044.592759419647	2	523.30419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KDEKKGNKV_	REV__tr|U7SNK3|U7SNK3_FUSNUMagnesiumtransporterOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01793PE=4SV=1	34.172542307311794	0.4838870758800184	6				NaN	NaN	0	NaN	14488	4991	19480
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19488	49.221	NaN	1808.2	30	0	1030.4	0.143	+			27084	MALLVPLVY	9	45	509.8034352203789	1017.5923175075578	2	509.80474853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MALLVPLVY_	ENSG00000179091|ENST00000318911|CYC1;ENST00000533444.1_1_8:145150729-145152236:+|nuORF	21.70233525837049	0.6004277881119521	6				NaN	NaN	0	NaN	14489	4997	19487
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19525	49.363	NaN	1524.5	30	0	108.96	0.214				-1	 	0	58	479.27696510489886	956.5393772765977	2	479.2775573730469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14502	5021	19524
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19526	49.366	NaN	1095.7	30	0	93.774	0.033	+			4712	ATLTVMVI	8	45	424.25117399242095	NaN	0	424.25103759765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATLTVMVI_	DCHS1|p.G2765Rfs*10|1|0.26|ENSG00000166341|chr11:6623383-6623384|-/T|frameshift_variant;DCHS1|p.H2834Sfs*7|1|0.44|ENSG00000166341|chr11:6623177-6623178|-/C|frameshift_variant;ENSG00000166341|ENST00000299441|DCHS1	83.28718786952967	1.7418937515398478	6				NaN	NaN	0	NaN	14503	5021	19524
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19545	49.424	NaN	2123.7	30	0	318.58	0.144	+			45208	TVNQSLLSPL	10	59	536.3054825022546	1070.596412071309	2	536.3068237304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVNQSLLSPL_	CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000425226.1_1_2:203706028-203706388:-|nuORF;ENST00000430398.2_1_1:73570714-73571443:+|nuORF;ENST00000472924.1_1_3:160285772-160286174:+|nuORF;ENST00000550170.5_1_12:53294858-53298765:-|nuORF;ENST00000562022.1_1_15:43093683-43094592:-|nuORF;KRT8|p.V77G|1|0.28|ENSG00000170421|chr12:52904752-52904752|A/C|missense_variant;nc|ENSG00000170421|P05787-2|KRT8	82.7504851949679	0.1731497355276012	6				NaN	NaN	0	NaN	14513	5030	19544
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19555	49.448	NaN	2365.9	30	0	214.82	0.213	+			49837	VYSRYFTTY	9	67	600.2897893113513	1198.5650256895026	2	600.2896118164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	87.69643885390035	0.07135982304947239	6				NaN	NaN	0	NaN	14520	5033	19554
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19556	49.452	NaN	2263.4	30	0	1544	0.106			+	37046	SIRTLTALMKK	11	41	421.2591181484888	NaN	0	421.25933837890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SIRTLTALMKK_	REV__ENST00000452510.6_2_5:134102740-134109419:+|nuORF	23.37791116691581	0.456735970842152	6				NaN	NaN	0	NaN	14521	5033	19554
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19557	49.454	NaN	2169.8	30	0	99.76	0.035	+			39196	STAAFFLLR	9	58	513.2918237926582	1024.5690946521163	2	513.2919311523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STAAFFLLR_	ENSG00000137700|ENST00000330775|SLC37A4;ENST00000525039.5_1_11:118895622-118898521:-|nuORF;ENST00000525102.5_1_11:118895622-118898521:-|nuORF;ENST00000532085.1_1_11:118895622-118896243:-|nuORF;nc|ENSG00000137700|O43826-2|SLC37A4;nc|ENSG00000137700|O43826|SLC37A4	98.62937762414208	0.04060045538121712	6				NaN	NaN	0	NaN	14522	5033	19554
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19567	49.477	NaN	964.48	30	0	102.77	0.141				-1	HVNIVAYLGTC	11	41	416.2118835449219	NaN	0	416.2118835449219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_HVNIVAYLGTC(Carbamidomethyl (C))_	ENSG00000176601|ENST00000392915|MAP3K19;nc|ENSG00000176601|Q56UN5-3|MAP3K19;nc|ENSG00000176601|Q56UN5-4|MAP3K19;nc|ENSG00000176601|Q56UN5-5|MAP3K19;nc|ENSG00000176601|Q56UN5-7|MAP3K19	29.550750289552195	0.43372083775723597	6				NaN	NaN	0	NaN	14529	5036	19566
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19584	49.524	NaN	6523.2	30	0	378.97	0.214	+			7543	DGVVKRAVAS	10	77	501.29020684090995	1000.5658607486199	2	501.2905578613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DGVVKRAVAS_	ENSG00000157881|ENST00000378466|PANK4	30.568863376406313	0.6301935916953115	6				NaN	NaN	0	NaN	14540	5042	19583
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19585	49.527	NaN	1298.3	30	0	152.05	0.035			+	-1	WLCYVMGL	8	45	521.2479946881623	1040.4814364431245	2	521.2492065429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_WLC(Carbamidomethyl (C))YVMGL_	REV__ENST00000375370.9_1_13:114295208-114295328:+|nuORF	33.49298260027079	0.7007254697536482	6				NaN	NaN	0	NaN	14541	5042	19583
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19590	49.542	NaN	890.59	30	0	386.84	0.215	+			36325	SESPSQPSD	9	36	467.1927725307422	NaN	0	467.1933898925781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SESPSQPSD_	ENSG00000162599|ENST00000403491|NFIA;nc|ENSG00000162599|Q12857-2|NFIA;nc|ENSG00000162599|Q12857-3|NFIA;nc|ENSG00000162599|Q12857-4|NFIA	16.473147378115264	0.38122769658151995	6				NaN	NaN	0	NaN	14543	5045	19589
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19591	49.545	NaN	2937.1	30	0	1123.1	0.035			+	25026	LLGTLLFKL	9	61	509.338662137535	1016.66277134187	2	509.3381652832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LLGTLLFKL_	REV__ENSG00000120008|ENST00000263461|WDR11;REV__ENST00000497136.6_1_10:122626245-122665534:+|nuORF;REV__WDR11|p.L1134Gfs*5|1|0.26|ENSG00000120008|chr10:120905977-120905978|CC/-|frameshift_variant;REV__WDR11|p.Q977Sfs*9|1|0.27|ENSG00000120008|chr10:120903226-120903227|-/T|frameshift_variant;REV__WDR11|p.V841Cfs*15|1|0.07|ENSG00000120008|chr10:120900034-120900034|G/-|frameshift_variant	51.33545320467046	0.2872990594074956	6				NaN	NaN	0	NaN	14544	5045	19589
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19599	49.564	NaN	1306.2	30	0	815.55	0.138				-1	 	0	31	340.25901040161676	678.5034678700335	2	340.2591247558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14549	5048	19598
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19614	49.606	NaN	1216.2	30	0	102.08	0.143	+			24639	LGSRTLGSAAL	11	65	523.30364935952	1044.59274578584	2	523.8059692382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LGSRTLGSAAL_	ENST00000378246.6_1_10:14996005-14996065:-|nuORF	42.86426827375447	0.5187511139693657	6				NaN	NaN	0	NaN	14558	5054	19613
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19625	49.633	NaN	1529.8	30	0	192.63	0.214	+			46608	VFSTVVIHF	9	61	524.7940536474802	1047.5735543617602	2	524.7955322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VFSTVVIHF_	ENSG00000113161|ENST00000287936|HMGCR;nc|ENSG00000113161|P04035-2|HMGCR;nc|ENSG00000113161|P04035-3|HMGCR	68.484700416344	0.1473408039581241	6				NaN	NaN	0	NaN	14566	5057	19624
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19626	49.636	NaN	938.07	30	0	174.87	0.034			+	306	AAPIDNEGM	9	44	459.20404052734375	NaN	0	459.20404052734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAPIDNEGM_	REV__ENST00000407977.6_1_17:56493146-56493257:-|nuORF	19.359975847455235	0.3714571876404798	6				NaN	NaN	0	NaN	14567	5057	19624
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19638	49.672	NaN	1656	30	0	130.07	0.214				-1	 	0	51	396.21465214566973	790.4147513581395	2	396.2148132324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14573	5063	19637
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19639	49.676	NaN	1269.5	30	0	323.11	0.035	+			22969	KVRAHRGPS	9	53	504.2980501178801	NaN	0	504.2987365722656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVRAHRGPS_	ENST00000565205.5_1_16:88925858-88927364:+|nuORF	44.116797842482775	0.2472372736944149	6				NaN	NaN	0	NaN	14574	5063	19637
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19656	49.73	NaN	3350.8	30	0	1953.7	0.141			+	14760	GTKMGTMM	8	41	428.6898125783727	855.3650722235454	2	429.1932678222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTKMGTMM_	REV__SNX9|p.A127Pfs*75|1|0.28|ENSG00000130340|chr6:157896900-157896900|G/-|frameshift_variant	24.20275056022122	0.7724576178584145	6				NaN	NaN	0	NaN	14582	5072	19655
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19663	49.75	NaN	4285	30	0	2829.2	0.214				-1	 	0	47	436.6791470110542	871.3437410889085	2	436.67974853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14586	5075	19662
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19664	49.753	NaN	3129.8	30	0	1311.4	0.033			+	543	ADECHCGR	8	42	445.6638976258933	889.3132423185866	2	445.66668701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ADECHCGR_	REV__FAT1|p.R4160C|1|0.5|ENSG00000083857|chr4:186597062-186597062|G/A|missense_variant	19.359975847455235	0.7988239741663654	6				NaN	NaN	0	NaN	14587	5075	19662
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19672	49.773	NaN	10671	30	0	4767.9	0.141			+	29012	NSPPECED	8	56	445.6638976258933	889.3132423185866	2	446.1658020019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NSPPECED_	REV__ENSG00000072840|ENST00000264956|EVC;REV__EVC|p.V948Cfs*22|1|0.07|ENSG00000072840|chr4:5810394-5810394|G/-|frameshift_variant	20.481830146152948	0.8005983782650069	6				NaN	NaN	0	NaN	14592	5078	19671
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19683	49.8	NaN	5333.4	30	0	1984.9	0.214			+	7548	DHGARDYFE	9	47	555.2359627003124	1108.4573724674246	2	555.2374877929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DHGARDYFE_	REV__ENSG00000110881|ENST00000447966|ASIC1;REV__nc|ENSG00000110881|P78348-1|ASIC1	19.1035232394073	0.6112419832031293	6				NaN	NaN	0	NaN	14600	5081	19682
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19684	49.804	NaN	2378.1	30	0	665.64	0.106			+	-1	CNHCQYPKE	9	44	589.7397930898616	1177.465033246523	2	589.7410888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_C(Carbamidomethyl (C))NHCQYPKE_	REV__ENSG00000105497|ENST00000262259|ZNF175	20.94693142431847	0.6074874384046576	6				NaN	NaN	0	NaN	14601	5081	19682
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19685	49.806	NaN	2342	30	0	235.7	0.038	+			49838	VYSRYFTTY	9	68	600.2897893113513	1198.5650256895026	2	600.2906494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	14602	5081	19682
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19716	49.885	NaN	2442.3	30	0	141.3	0.143			+	31678	QNKIKEKN	8	74	501.29020684090995	1000.5658607486199	2	501.29052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QNKIKEKN_	REV__ENSG00000144395|ENST00000389175|CCDC150;REV__ENST00000494389.5_1_2:197559796-197594150:+|nuORF;REV__nc|ENSG00000144395|Q8NCX0-2|CCDC150;REV__nc|ENSG00000144395|Q8NCX0-3|CCDC150	31.529811441608018	0.715883593221515	6				NaN	NaN	0	NaN	14624	5090	19715
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19734	49.934	NaN	1004.3	30	0	72.785	0.214			+	17541	IDSPRKATY	9	47	525.7837524414062	NaN	0	525.7837524414062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IDSPRKATY_	REV__ENSG00000116120|ENST00000281828|FARSB;REV__FARSB|p.I265*|1|0.36|ENSG00000116120|chr2:222630168-222630168|T/-|frameshift_variant;REV__FARSB|p.I364Nfs*7|1|0.04|ENSG00000116120|chr2:222624353-222624354|-/AACACTCCTTATTG|frameshift_variant;REV__nc|ENSG00000116120|Q9NSD9-2|FARSB	24.519189625965996	0.35377483217337163	6				NaN	NaN	0	NaN	14636	5096	19733
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19735	49.937	NaN	1621.9	30	0	354.81	0.038			+	7373	DDPAYDMEEE	10	40	607.2145074579284	1212.4144619826568	2	607.2158813476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DDPAYDMEEE_	REV__ENSG00000006712|ENST00000221265|PAF1;REV__nc|ENSG00000006712|Q8N7H5-2|PAF1;REV__nc|ENSG00000006712|Q8N7H5-3|PAF1	16.473147378115264	0.7327422906225664	6				NaN	NaN	0	NaN	14637	5096	19733
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19752	49.982	NaN	2159.3	30	0	716.05	0.145	+			31780	QPINLIFRY	9	61	582.331854342795	1162.64915575239	2	582.3334350585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QPINLIFRY_	ENSG00000182004|ENST00000414487|SNRPE;SNRPE|p.Q26H|1|0.3|ENSG00000182004|chr1:203862219-203862219|A/C|missense_variant	37.15910966729921	0.4535818937225704	6				NaN	NaN	0	NaN	14648	5102	19751
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19757	49.999	NaN	4047.1	30	0	1035.4	0.142	+			47075	VLIENVASL	9	61	479.2837724803695	956.5529920275391	2	479.2843322753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VLIENVASL_	ENSG00000176153|ENST00000389614|GPX2;GPX2|p.W152*|1|0.31|ENSG00000176153|chr14:64939605-64939605|C/-|frameshift_variant	158.07458414430337	0.004987072822166904	6				NaN	NaN	0	NaN	14650	5105	19756
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19763	50.017	NaN	3114.7	30	0	524.33	0.143	+			42085	SYGDILHVI	9	64	508.77368529164556	1015.5328176500911	2	508.77374267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SYGDILHVI_	ENSG00000082458|ENST00000374360|DLG3;ENST00000466140.5_1_X:69698992-69715274:+|nuORF;nc|ENSG00000082458|Q92796-2|DLG3;nc|ENSG00000082458|Q92796-3|DLG3	90.77665401227738	0.06267569666681755	6				NaN	NaN	0	NaN	14653	5108	19762
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19781	50.062	NaN	1299.7	30	0	60.111	0.144			+	26757	LVPFCNLRK	9	59	545.3166775487846	1088.618802164369	2	545.3182373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LVPFCNLRK_	REV__ABCA8|p.L1128*|1|0.37|ENSG00000141338|chr17:68885242-68885242|A/-|frameshift_variant;REV__ABCA9|p.F1166Lfs*5|1|0.33|ENSG00000154258|chr17:68995952-68995952|A/-|frameshift_variant;REV__ABCA9|p.L1080*|1|0.43|ENSG00000154258|chr17:69008144-69008144|A/-|frameshift_variant;REV__ABCA9|p.P1249Qfs*18|1|0.17|ENSG00000154258|chr17:68990930-68990930|A/-|frameshift_variant;REV__ENSG00000141338|ENST00000586539|ABCA8;REV__ENSG00000154258|ENST00000340001|ABCA9;REV__ENST00000492580.1_1_17:67008011-67013901:-|nuORF;REV__ENST00000541225.5_1_17:66883094-66937097:-|nuORF;REV__nc|ENSG00000141338|O94911-1|ABCA8;REV__nc|ENSG00000154258|Q8IUA7-3|ABCA9;REV__nc|ENSG00000154258|Q8IUA7-4|ABCA9	19.359975847455235	0.6112419832031293	6				NaN	NaN	0	NaN	14665	5114	19780
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19785	50.079	NaN	6591.4	30	0	5521.7	0.141	+			39303	STASMVSSS	9	41	428.6898125783727	855.3650722235454	2	428.6907958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STASMVSSS_	CLIP1|p.E992Lfs*32|1|0.2|ENSG00000130779|chr12:122328315-122328321|TGCTTCT/-|frameshift_variant;CLIP1|p.M1151Wfs*8|1|0.31|ENSG00000130779|chr12:122316771-122316771|T/-|frameshift_variant;ENSG00000130779|ENST00000620786|CLIP1;nc|ENSG00000130779|P30622-1|CLIP1;nc|ENSG00000130779|P30622-2|CLIP1	24.20275056022122	0.577060078256802	6				NaN	NaN	0	NaN	14666	5117	19784
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19797	50.116	NaN	976.81	30	0	469.92	0.214				-1	 	0	29	436.6791470110542	871.3437410889085	2	436.6802978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14672	5123	19796
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19798	50.12	NaN	667.65	30	0	82.913	0.033	+			29982	PPCCSPPSC	9	37	445.6638976258933	889.3132423185866	2	446.16546630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PPCCSPPSC_	ENST00000529974.1_1_11:88068229-88070878:-|nuORF;ENST00000533865.5_1_11:88068195-88070878:-|nuORF	24.20275056022122	0.577060078256802	6				NaN	NaN	0	NaN	14673	5123	19796
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19804	50.136	NaN	1693.5	30	0	305.71	0.145	+			14458	GTCAFSILFK	10	60	572.2968340927689	1142.5791152523377	2	572.2975463867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GTC(Carbamidomethyl (C))AFSILFK_	ENSG00000165219|ENST00000297933|GAPVD1;GAPVD1|p.S186Ffs*2|1|0.33|ENSG00000165219|chr9:125302347-125302348|-/T|frameshift_variant;nc|ENSG00000165219|Q14C86-3|GAPVD1;nc|ENSG00000165219|Q14C86-4|GAPVD1;nc|ENSG00000165219|Q14C86-5|GAPVD1;nc|ENSG00000165219|Q14C86-6|GAPVD1;nc|ENSG00000165219|Q14C86|GAPVD1	98.58198989935565	0.0819402597096128	6				NaN	NaN	0	NaN	14676	5126	19803
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19810	50.155	NaN	1875.4	30	0	208.83	0.145	+			49839	VYSRYFTTY	9	61	600.2897893113513	1198.5650256895026	2	600.291748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	82.24051045832904	0.08786059719216216	6				NaN	NaN	0	NaN	14679	5129	19809
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19818	50.176	NaN	1511.5	30	0	384.24	0.215			+	46106	VDFGYLKLT	9	65	528.2904272771272	1054.5663016210542	2	528.291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VDFGYLKLT_	REV__ENST00000555422.5_1_14:76198560-76243086:+|nuORF	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	14684	5132	19817
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19819	50.18	NaN	1729.8	30	0	275.72	0.106	+			31144	QGGGLESPTKP	11	57	535.7769266681036	1069.539300403007	2	535.7772827148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QGGGLESPTKP_	ENSG00000131668|ENST00000253968|BARX1;nc|ENSG00000131668|Q9HBU1-2|BARX1	27.047317107675042	0.7060868989289394	6				NaN	NaN	0	NaN	14685	5132	19817
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19820	50.182	NaN	1581.5	30	0	105.84	0.106				-1	 	0	63	523.3039598598402	1044.5933667864804	2	523.3046264648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14686	5132	19817
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19821	50.184	NaN	997.37	30	0	71.524	0.106	+			42086	SYGDILHVI	9	52	508.77368529164556	1015.5328176500911	2	508.7929992675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SYGDILHVI_	ENSG00000082458|ENST00000374360|DLG3;ENST00000466140.5_1_X:69698992-69715274:+|nuORF;nc|ENSG00000082458|Q92796-2|DLG3;nc|ENSG00000082458|Q92796-3|DLG3	55.50420428727701	0.2510918378945873	6				NaN	NaN	0	NaN	14687	5132	19817
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19822	50.186	NaN	897.74	30	0	139.99	0.035			+	10214	ETGPCVYQL	9	43	505.2364209270956	1008.4582889209912	2	505.2362060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ETGPCVYQL_	REV__ENSG00000171004|ENST00000370833|HS6ST2;REV__HS6ST2|p.L496Cfs*7|1|0.51|ENSG00000171004|chrX:132628554-132628554|A/-|frameshift_variant;REV__nc|ENSG00000171004|Q96MM7-2|HS6ST2;REV__nc|ENSG00000171004|Q96MM7-3|HS6ST2;REV__nc|ENSG00000171004|Q96MM7|HS6ST2	35.61828744233558	0.47037581924408073	6				NaN	NaN	0	NaN	14688	5132	19817
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19829	50.204	NaN	891.54	30	0	334.19	0.214	+			36692	SGQGFTNF	8	37	429.19232177734375	NaN	0	429.19232177734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SGQGFTNF_	chr1:143382868-144245238|241|14.46|0.0|20.46|-|2|TE_info:MLT1H1,MLT1H1_dup139,ERVL-MaLR,LTR,acceptor,-,143382506,143382868|None,LINC02802|4;chr1:144208475-144245238|418|15.68|0.0|20.58|-|2|TE_info:MLT1H1,MLT1H1_dup140,ERVL-MaLR,LTR,acceptor,-,144208113,144208475|None,LINC02802|4	23.04248740728303	1.7418937515398478	6				NaN	NaN	0	NaN	14692	5135	19828
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19830	50.207	NaN	1191.9	30	0	279.78	0.032				-1	 	0	45	405.06214629658496	NaN	0	405.0622863769531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14693	5135	19828
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19837	50.224	NaN	1312.6	30	0	574.01	0.144	+			33370	RHRLEVPR	8	48	531.8181292753833	NaN	0	531.8182373046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RHRLEVPR_	ENST00000300849.4_2_16:31085137-31085191:-|nuORF	31.954861631926434	1.7418937515398478	6				NaN	NaN	0	NaN	14697	5138	19836
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19842	50.24	NaN	1668	30	0	93.834	0.143			+	13576	GLTVQRGLSA	10	60	501.29020684090995	1000.5658607486199	2	501.29083251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GLTVQRGLSA_	REV__ENST00000425013.6_1_7:5661541-5661721:-|nuORF	23.37791116691581	0.6889178131139211	6				NaN	NaN	0	NaN	14699	5141	19841
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19864	50.342	NaN	762.28	30	0	94.303	0.142	+			11563	FPLNVLCL	8	39	459.76116943359375	NaN	0	459.76116943359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FPLNVLCL_	ENSG00000073910|ENST00000542859|FRY;FRY|p.F2418Vfs*11|1|0.14|ENSG00000073910|chr13:32254229-32254230|-/G|frameshift_variant	28.2542754592877	1.7418937515398478	6				NaN	NaN	0	NaN	14703	5159	19863
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19883	50.411	NaN	911.95	30	0	117.8	0.214	+			37375	SLFSALLRI	9	38	510.3163351175198	1018.6181173018397	2	510.3169250488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLFSALLRI_	TM4SF19|p.C182R|1|0.24|ENSG00000145107|chr3:196323903-196323903|A/G|missense_variant	42.396135135203025	0.392153681582562	6				NaN	NaN	0	NaN	14710	5171	19882
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19884	50.415	NaN	1095	30	0	91.963	0.036			+	26920	LYETGFGFAV	10	48	552.2728881835938	NaN	0	552.2728881835938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LYETGFGFAV_	REV__ENSG00000198691|ENST00000370225|ABCA4	38.80614096846853	0.372755673314885	6				NaN	NaN	0	NaN	14711	5171	19882
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19905	50.499	NaN	1769.1	30	0	107.17	0.145	+			49840	VYSRYFTTY	9	54	600.2897893113513	1198.5650256895026	2	600.2913208007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	14717	5186	19904
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19910	50.517	NaN	4412.6	30	0	258.35	0.143				-1	 	0	79	523.3039598598402	1044.5933667864804	2	523.3050537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14719	5189	19909
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19924	50.572	NaN	1572.7	30	0	817.48	0.144	+			28570	NKGIKLDFK	9	49	531.8181292753833	NaN	0	531.8170166015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NKGIKLDFK_	ENSG00000152380|ENST00000282226|FAM151B;ENST00000509292.1_1_5:79797630-79817970:+|nuORF;ENST00000511718.5_1_5:79809433-79814625:+|nuORF	23.04248740728303	0.3589936788096251	6				NaN	NaN	0	NaN	14724	5198	19923
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19928	50.59	NaN	890.49	30	0	53.834	0.144			+	25194	LMHALVIGVH	10	61	545.3174438476562	NaN	0	545.3174438476562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LMHALVIGVH_	REV__ENSG00000138780|ENST00000515279|GSTCD;REV__GSTCD|p.N625Kfs*2|1|0.33|ENSG00000138780|chr4:105845544-105845545|-/A|frameshift_variant;REV__nc|ENSG00000138780|Q8NEC7-3|GSTCD	19.359975847455235	0.4201028297492154	6				NaN	NaN	0	NaN	14725	5201	19927
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19981	50.828	NaN	1234.3	30	0	78.212	0.141			+	18393	IRKSSMGG	8	54	418.22750114304347	NaN	0	418.2272644042969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IRKSSMGG_	REV__ENSG00000117115|ENST00000375486|PADI2;REV__ENST00000479534.5_1_1:17395541-17401618:-|nuORF	20.481830146152948	1.741893751539848	6				NaN	NaN	0	NaN	14736	5243	19980
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19986	50.845	NaN	1856.3	30	0	180.06	0.145	+			49841	VYSRYFTTY	9	63	600.2897893113513	1198.5650256895026	2	600.2908935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	75.04331003522576	0.118981335847003	6				NaN	NaN	0	NaN	14738	5246	19985
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19990	50.862	NaN	1632.5	30	0	103.06	0.143				-1	 	0	64	523.3039598598402	1044.5933667864804	2	523.3043823242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14739	5249	19989
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19994	50.879	NaN	2130.3	30	0	238.86	0.143			+	36764	SHRQMHLK	8	55	518.7770164665587	1035.5394799999174	2	518.7783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SHRQMHLK_	REV__ENST00000580893.5_1_17:62486773-62489133:-|nuORF	30.503639358989545	0.7238069182250283	6				NaN	NaN	0	NaN	14740	5252	19993
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20013	50.962	NaN	1255.9	30	0	59.133	0.145			+	30006	PPKIPKPIED	10	68	567.3305547215673	NaN	0	567.3302001953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PPKIPKPIED_	REV__ENSG00000120896|ENST00000240123|SORBS3;REV__nc|ENSG00000120896|O60504-2|SORBS3	26.69291269510374	0.4125295221340092	6				NaN	NaN	0	NaN	14744	5267	20012
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20035	51.063	NaN	1427.3	30	0	52.969	0.144	+			21636	KPSLKGSKSSA	11	61	545.3170834817689	1088.6196140303377	2	545.3182373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KPSLKGSKSSA_	ENST00000424768.1_1_7:105926115-105926304:-|nuORF	24.231819034082204	0.7356191775841856	6				NaN	NaN	0	NaN	14748	5285	20034
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20045	51.099	NaN	1361.3	30	0	90.948	0.214			+	18661	ISVLKANVM	9	52	495.78485696335304	NaN	0	495.78509521484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ISVLKANVM(Oxidation (M))_	REV__tr|U7SHF3|U7SHF3_FUSNUSAPdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02294PE=4SV=1	44.377184641726394	0.24544280798894275	6				NaN	NaN	0	NaN	14752	5291	20044
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20046	51.103	NaN	904.3	30	0	82.168	0.035			+	21845	KRIAFRSK	8	51	503.3208312988281	NaN	0	503.3208312988281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KRIAFRSK_	REV__AQR|p.K1234Sfs*17|1|0.35|ENSG00000021776|chr15:34870819-34870819|T/-|frameshift_variant;REV__AQR|p.K759Rfs*19|1|0.27|ENSG00000021776|chr15:34897678-34897678|T/-|frameshift_variant;REV__ENSG00000021776|ENST00000156471|AQR;REV__ENST00000558202.1_1_15:35240356-35256599:-|nuORF	20.94693142431847	1.7418937515398478	6				NaN	NaN	0	NaN	14753	5291	20044
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20066	51.186	NaN	1445.6	30	0	119.4	0.145	+			49842	VYSRYFTTY	9	56	600.2898209018559	1198.5650888705118	2	600.2918701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	79.71258880314673	0.09879134589249085	6				NaN	NaN	0	NaN	14758	5306	20065
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20071	51.203	NaN	1174	30	0	519.66	0.144	+			11244	FILFKRPW	8	42	553.8300452708683	1105.6455376085364	2	553.8323364257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FILFKRPW_	ENSG00000167470|ENST00000682408|MIDN;MIDN|p.R261Afs*13|1|0.32|ENSG00000167470|chr19:1254981-1254981|C/-|frameshift_variant	14.664097394203935	0.7913966407026132	6				NaN	NaN	0	NaN	14760	5309	20070
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20118	51.404	NaN	2722.6	30	0	120.18	0.144	+			9419	EKIKNDSKK	9	74	545.3170834817689	1088.6196140303377	2	545.3175048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EKIKNDSKK_	tr|U7T0W5|U7T0W5_FUSNUDUF4132domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00703PE=4SV=1	24.519189625965996	0.574102787014149	6				NaN	NaN	0	NaN	14771	5345	20117
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20123	51.421	NaN	1576.9	30	0	136.6	0.144	+			5880	AVIVWSFMK	9	54	540.7991995571306	1079.583846181061	2	540.80078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVIVWSFMK_	ENST00000514133.1_1_4:52895917-52895998:-|nuORF	54.776311868738084	0.25715957988447635	6				NaN	NaN	0	NaN	14773	5348	20122
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20140	51.505	NaN	1163.4	30	0	46.693	0.144	+			30439	PYMAKFVVF	9	57	551.2944157590435	NaN	0	551.2950439453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PYMAKFVVF_	ANK2|p.E1746*|1|0.07|ENSG00000145362|chr4:113353848-113353849|-/C|frameshift_variant;ANK2|p.N1476Mfs*12|1|0.21|ENSG00000145362|chr4:113350244-113350244|A/-|frameshift_variant;ANK2|p.R2581Efs*5|1|0.41|ENSG00000145362|chr4:113356352-113356353|-/A|frameshift_variant;ANK2|p.V1324I|2|0.27|ENSG00000145362|chr4:113341764-113341764|G/A|missense_variant;ANK3|p.I2751Nfs*14|2|0.36|ENSG00000151150|chr10:60072629-60072630|-/T|frameshift_variant;ANK3|p.I2751Yfs*21|1|0.07|ENSG00000151150|chr10:60072630-60072630|T/-|frameshift_variant;ANK3|p.I3117Sfs*2|3|0.22|ENSG00000151150|chr10:60071532-60071532|T/-|frameshift_variant;ANK3|p.K2612Rfs*25|1|0.43|ENSG00000151150|chr10:60073046-60073046|T/-|frameshift_variant;ANK3|p.K2850Rfs*29|1|0.08|ENSG00000151150|chr10:60072332-60072332|T/-|frameshift_variant;ANK3|p.K3331Nfs*6|1|0.32|ENSG00000151150|chr10:60070888-60070888|T/-|frameshift_variant;ANK3|p.K3778Nfs*26|1|0.37|ENSG00000151150|chr10:60069547-60069547|T/-|frameshift_variant;ANK3|p.K4020Rfs*45|4|0.35|ENSG00000151150|chr10:60068822-60068822|T/-|frameshift_variant;ANK3|p.K4140Nfs*15|2|0.27|ENSG00000151150|chr10:60064188-60064188|T/-|frameshift_variant;ANK3|p.L1778Tfs*66|1|0.38|ENSG00000151150|chr10:60075550-60075551|-/G|frameshift_variant;ANK3|p.M3608Cfs*4|1|0.37|ENSG00000151150|chr10:60070059-60070059|T/-|frameshift_variant;ANK3|p.P2846Tfs*8|1|0.32|ENSG00000151150|chr10:60072346-60072347|-/C|frameshift_variant;ANK3|p.S4352Vfs*2|1|0.51|ENSG00000151150|chr10:60055669-60055670|-/C|frameshift_variant;ANK3|p.W4141Mfs*12|1|0.36|ENSG00000151150|chr10:60064187-60064188|-/T|frameshift_variant;ENSG00000145362|ENST00000357077|ANK2;ENSG00000151150|ENST00000280772|ANK3;nc|ENSG00000145362|Q01484-2|ANK2;nc|ENSG00000145362|Q01484-5|ANK2;nc|ENSG00000151150|Q12955-4|ANK3;nc|ENSG00000151150|Q12955-5|ANK3;nc|ENSG00000151150|Q12955-6|ANK3;nc|ENSG00000151150|Q12955-7|ANK3	38.80614096846853	0.28164298475537564	6				NaN	NaN	0	NaN	14775	5363	20139
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20147	51.525	NaN	6282.9	30	0	1526.1	0.144	+			6703	AYVLNIVRF	9	59	547.8218643681704	1093.6291758031407	2	547.8223876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AYVLNIVRF_	ATP1B1|p.L184Hfs*6|1|0.09|ENSG00000143153|chr1:169127391-169127392|-/A|frameshift_variant;ENSG00000143153|ENST00000367815|ATP1B1;nc|ENSG00000143153|P05026-2|ATP1B1	139.97047562133406	0.010493916756945389	6				NaN	NaN	0	NaN	14779	5366	20146
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20152	51.542	NaN	1247.1	30	0	105.74	0.146	+			49846	VYSRYFTTY	9	48	600.2913157727847	NaN	0	600.291748046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	62.107414245175825	0.1403307765918332	6				NaN	NaN	0	NaN	14781	5369	20151
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20183	51.677	NaN	1562.1	30	0	237.98	0.143	+			1482	AFMKGVFTF	9	56	524.2711569426299	NaN	0	524.2719116210938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AFMKGVFTF_	ENSG00000244187|ENST00000290079|TMEM141;ENST00000465017.5_1_9:139685862-139687281:+|nuORF;ENST00000489739.1_1_9:139685858-139686514:+|nuORF	74.25504064058377	0.09106938647426577	6				NaN	NaN	0	NaN	14788	5393	20182
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20200	51.745	NaN	1509.3	30	0	75.424	0.144			+	-1	RPRGAIHQL	9	60	545.3170834817689	1088.6196140303377	2	545.3174438476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))RPRGAIHQL_	REV__ENST00000321751.9_1_1:1309740-1310526:-|nuORF;REV__ENST00000338338.9_1_1:1309740-1310620:-|nuORF;REV__ENST00000378853.3_1_1:1309740-1310526:-|nuORF	31.954861631926434	0.5046124803899898	6				NaN	NaN	0	NaN	14793	5405	20199
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20240	51.899	NaN	1489.2	30	0	119.69	0.214	+			49847	VYSRYFTTY	9	64	600.2913068968388	NaN	0	600.292236328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	67.49366992349736	0.1173583512313808	6				NaN	NaN	0	NaN	14806	5432	20239
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20241	51.903	NaN	578.73	30	0	248.63	0.035				-1	VVILGTCYG	9	27	491.25672161240857	NaN	0	491.25634765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_VVILGTC(Carbamidomethyl (C))YG_	AVPR1A|p.A227V|1|0.31|ENSG00000166148|chr12:63150157-63150157|G/A|missense_variant;AVPR1A|p.F351Lfs*19|4|0.28|ENSG00000166148|chr12:63147563-63147563|A/-|frameshift_variant;ENSG00000166148|ENST00000299178|AVPR1A	13.775330524044264	0.3903584932235582	6				NaN	NaN	0	NaN	14807	5432	20239
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20264	51.987	NaN	1353.9	30	0	113.11	0.145				-1	MVNIKRMLL	9	64	567.3303263804634	1132.6460998277266	2	567.3325805664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))VNIKRMLL_	tr|U7SRJ7|U7SRJ7_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01629PE=4SV=1	25.450171626174864	0.5654022654467333	6				NaN	NaN	0	NaN	14815	5447	20263
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20325	52.25	NaN	1690.5	30	0	198.94	0.145	+			49848	VYSRYFTTY	9	55	600.2913068968388	NaN	0	600.2911987304688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	69.6276240434122	0.10825701912424071	6				NaN	NaN	0	NaN	14828	5495	20324
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20335	52.298	NaN	1636.2	30	0	530.47	0.14				-1	 	0	42	396.80166293860464	791.5887729440093	2	396.80133056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14829	5504	20334
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20347	52.348	NaN	1631.5	30	0	91.088	0.145	+			48702	VTTKQTQKIS	10	63	567.3303263804634	1132.6460998277266	2	567.3314819335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTTKQTQKIS_	ENSG00000169933|ENST00000675598|FRMPD4;FRMPD4|p.A947Qfs*130|1|0.42|ENSG00000169933|chrX:12717658-12717658|C/-|frameshift_variant;FRMPD4|p.C618Vfs*8|1|0.19|ENSG00000169933|chrX:12716306-12716306|C/-|frameshift_variant;FRMPD4|p.K1053Dfs*26|1|0.08|ENSG00000169933|chrX:12717982-12717983|-/GACTT|frameshift_variant;FRMPD4|p.L1210Pfs*39|1|0.05|ENSG00000169933|chrX:12718454-12718455|-/CT|frameshift_variant;FRMPD4|p.S1105Vfs*3|1|0.29|ENSG00000169933|chrX:12718134-12718134|A/-|frameshift_variant;nc|ENSG00000169933|Q14CM0|FRMPD4	17.468008924990375	0.7276870902328821	6				NaN	NaN	0	NaN	14832	5513	20346
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20401	52.596	NaN	1666.7	30	0	147.21	0.145	+			49843	VYSRYFTTY	9	57	600.2900261562473	1198.5654993792946	2	600.7941284179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	68.84614121027924	0.14577793175421136	6				NaN	NaN	0	NaN	14841	5558	20400
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20492	53.027	NaN	1295.7	30	0	117.75	0.145	+			49844	VYSRYFTTY	9	58	600.2898448838399	1198.5651368344797	2	600.2919311523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	47.657333605630114	0.33044192980041115	6				NaN	NaN	0	NaN	14854	5636	20491
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20499	53.06	NaN	1017.1	30	0	45.595	0.145	+			51253	YQRKGLTGRV	10	55	589.3437821099351	NaN	0	589.3438110351562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YQRKGLTGRV_	ENSG00000139116|ENST00000361418|KIF21A;KIF21A|p.L1270Sfs*13|1|0.12|ENSG00000139116|chr12:39318174-39318175|-/G|frameshift_variant;KIF21A|p.P1541Lfs*6|1|0.27|ENSG00000139116|chr12:39303074-39303074|G/-|frameshift_variant;nc|ENSG00000139116|Q7Z4S6-2|KIF21A;nc|ENSG00000139116|Q7Z4S6-3|KIF21A;nc|ENSG00000139116|Q7Z4S6-4|KIF21A;nc|ENSG00000139116|Q7Z4S6-5|KIF21A;nc|ENSG00000139116|Q7Z4S6-6|KIF21A	24.519189625965996	0.41966695327750003	6				NaN	NaN	0	NaN	14855	5642	20498
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20526	53.167	NaN	870.32	30	0	118.87	0.143			+	33012	REGQMAARL	9	46	516.274169921875	NaN	0	516.274169921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_REGQMAARL_	REV__ENSG00000169918|ENST00000307050|OTUD7A;REV__nc|ENSG00000169918|Q8TE49|OTUD7A	32.81241826257853	0.3119040447479903	6				NaN	NaN	0	NaN	14864	5660	20525
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20566	53.366	NaN	1339	30	0	123.43	0.145	+			49849	VYSRYFTTY	9	55	600.2910844569453	NaN	0	600.2901000976562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	58.22992032128504	0.15686832049467786	6				NaN	NaN	0	NaN	14868	5696	20565
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20638	53.715	NaN	1456.2	30	0	176.93	0.145	+			49850	VYSRYFTTY	9	56	600.2909945764858	NaN	0	600.29150390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	45.97224482568171	0.23445038899310136	6				NaN	NaN	0	NaN	14877	5759	20637
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20714	54.095	NaN	1333.2	30	0	142.56	0.145	+			49851	VYSRYFTTY	9	52	600.2909945764858	NaN	0	600.2916870117188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	58.22992032128504	0.15686832049467786	6				NaN	NaN	0	NaN	14884	5828	20713
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20790	54.474	NaN	1288.7	30	0	172.94	0.145	+			49852	VYSRYFTTY	9	48	600.2909906780802	NaN	0	600.2913818359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	31.529811441608018	0.3183796599642538	6				NaN	NaN	0	NaN	14891	5897	20789
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20861	54.821	NaN	1378.3	30	0	95.596	0.145	+			49853	VYSRYFTTY	9	61	600.2909906780802	NaN	0	600.2911376953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	58.22992032128504	0.15686832049467786	6				NaN	NaN	0	NaN	14899	5960	20860
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20931	55.166	NaN	1194.5	30	0	121.05	0.145	+			49854	VYSRYFTTY	9	40	600.2913638936019	NaN	0	600.2904052734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	41.42661286455405	0.26577678759562784	6				NaN	NaN	0	NaN	14906	6023	20930
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	21013	55.564	NaN	1168.6	30	0	135.71	0.145	+			49845	VYSRYFTTY	9	48	600.2898200212804	1198.5650871093608	2	600.2919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	39.252832667884924	0.4290233611298554	6				NaN	NaN	0	NaN	14916	6095	21012
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	21065	55.919	NaN	1337.7	30	0	116.02	0.145	+			43886	TMWIERTTY	9	52	600.7925027026232	NaN	0	600.7927856445312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TMWIERTTY_	ENSG00000147459|ENST00000276440|DOCK5;ENST00000467709.6_1_8:25246445-25268811:+|nuORF	42.86426827375447	0.2558691296974908	6				NaN	NaN	0	NaN	14920	6143	21064
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	21139	56.293	NaN	1194.9	30	0	129.19	0.145			+	7454	DFLQNVPFGY	10	50	600.2898577169649	1198.5651625007297	2	600.2908935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DFLQNVPFGY_	REV__ENSG00000144036|ENST00000272427|EXOC6B;REV__nc|ENSG00000144036|Q9Y2D4-2|EXOC6B	34.172542307311794	0.6007644933930345	6				NaN	NaN	0	NaN	14925	6212	21138
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	21241	56.817	NaN	1265.3	30	0	110.41	0.145	+			49855	VYSRYFTTY	9	52	600.290741275119	NaN	0	600.290283203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	44.377184641726394	0.24544280798894275	6				NaN	NaN	0	NaN	14931	6308	21240
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	1981	10.407	NaN	7503	30	0	1842.2	0.143	+			6748	CDKPIGPCVT	10	51	516.7472005980586	1031.4798482629171	2	516.7493286132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CDKPIGPCVT_	CON__REFSEQ:XP_986630	52.936696900407355	0.4300801048568001	6				NaN	NaN	0	NaN	1	1978	1980
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	1985	10.424	NaN	4080.3	30	0	533.75	0.214				-1	CMGEEHCAPP	10	26	565.7106885661995	NaN	0	565.7106323242188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_C(Carbamidomethyl (C))MGEEHCAPP_	LTBP2|p.H1189Pfs*57|1|0.22|ENSG00000119681|chr14:74508690-74508691|-/G|frameshift_variant	12.206847966760668	0.4201028297492154	6				NaN	NaN	0	NaN	2	1981	1984
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	1986	10.427	NaN	5176.6	30	0	1177.1	0.106	+			22907	KVMKDAKTK	9	60	532.8115536413152	NaN	0	532.8118896484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_KVM(Oxidation (M))KDAKTK_	ENSG00000198900|ENST00000361337|TOP1	101.45984612302182	0.018494728971010316	6				NaN	NaN	0	NaN	3	1981	1984
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	1987	10.429	NaN	2480.2	30	0	1141.6	0.106	+			30139	PRWCWGDH	8	22	528.7283676556646	NaN	0	528.7279663085938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PRWCWGDH_	ENST00000444874.5_1_7:99950069-99950487:+|nuORF	12.959181472943097	1.7418937515398478	6				NaN	NaN	0	NaN	4	1981	1984
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	1988	10.431	NaN	1405	30	0	317.31	0.036			+	-1	EEQCLCVC	8	21	549.2091064453125	NaN	0	549.2091064453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	3 Carbamidomethyl (C)	_EEQC(Carbamidomethyl (C))LC(Carbamidomethyl (C))VC(Carbamidomethyl (C))_	REV__ENST00000302362.10_2_17:30178912-30178951:-|nuORF	12.959181472943097	1.7418937515398478	6				NaN	NaN	0	NaN	5	1981	1984
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	1995	10.449	NaN	143.16	30	0	21.45	0.154	+			33907	RRRWTFRKWWG	11	12	817.9530639648438	NaN	0	817.9530639648438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RRRWTFRKWWG_	ENST00000313401.3_1_17:30817050-30817605:+|nuORF	0.7557082228359009	0.456735970842152	6				NaN	NaN	0	NaN	9	1984	1994
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2036	10.653	NaN	2595.1	30	0	703.87	0.214			+	23797	LCMLFQRL	8	50	540.7892313510287	1079.5639097688572	2	540.7908325195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_LC(Carbamidomethyl (C))MLFQRL_	REV__CALU|p.S11T|1|0.35|ENSG00000128595|chr7:128748614-128748614|T/A|missense_variant;REV__ENSG00000128595|ENST00000249364|CALU;REV__nc|ENSG00000128595|O43852-10|CALU;REV__nc|ENSG00000128595|O43852-11|CALU;REV__nc|ENSG00000128595|O43852-12|CALU;REV__nc|ENSG00000128595|O43852-13|CALU;REV__nc|ENSG00000128595|O43852-14|CALU;REV__nc|ENSG00000128595|O43852-2|CALU;REV__nc|ENSG00000128595|O43852-3|CALU;REV__nc|ENSG00000128595|O43852-4|CALU;REV__nc|ENSG00000128595|O43852-5|CALU;REV__nc|ENSG00000128595|O43852-6|CALU;REV__nc|ENSG00000128595|O43852-7|CALU;REV__nc|ENSG00000128595|O43852-8|CALU;REV__nc|ENSG00000128595|O43852-9|CALU	44.53106598305862	0.628196326904373	6				NaN	NaN	0	NaN	11	2023	2035
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2037	10.657	NaN	7249.5	30	0	4736	0.036	+			4840	ATPKKASKPK	10	46	528.3318688448521	1054.6491847565042	2	528.3328247070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATPKKASKPK_	ENSG00000189060|ENST00000340857|H1-0;nc|ENSG00000189060|P07305-2|H1-0	53.59686742100583	0.4240759338601513	6				NaN	NaN	0	NaN	12	2023	2035
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2041	10.671	NaN	2963.3	30	0	344.86	0.214			+	50084	WGHFARRHS	9	37	577.2917869053199	1152.5690208774397	2	577.293701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WGHFARRHS_	REV__ENSG00000017260|ENST00000510168|ATP2C1;REV__nc|ENSG00000017260|P98194-2|ATP2C1;REV__nc|ENSG00000017260|P98194-3|ATP2C1;REV__nc|ENSG00000017260|P98194-4|ATP2C1;REV__nc|ENSG00000017260|P98194-5|ATP2C1;REV__nc|ENSG00000017260|P98194-6|ATP2C1;REV__nc|ENSG00000017260|P98194-7|ATP2C1;REV__nc|ENSG00000017260|P98194-9|ATP2C1	21.68575002086885	0.60058278597072	6				NaN	NaN	0	NaN	13	2026	2040
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2042	10.675	NaN	5779.8	30	0	3984.1	0.106	+			4821	ATNVVRLLLG	10	29	352.5576171875	NaN	0	352.5576171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATNVVRLLLG_	ENSG00000102595|ENST00000376747|UGGT2;nc|ENSG00000102595|Q9NYU1-2|UGGT2;UGGT2|p.N1268Ifs*10|1|0.3|ENSG00000102595|chr13:95859613-95859613|T/-|frameshift_variant	17.468008924990375	0.4201028297492154	6				NaN	NaN	0	NaN	14	2026	2040
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2043	10.677	NaN	2488.1	30	0	801.51	0.036			+	19646	KDKVGHKLI	9	35	346.55401611328125	NaN	0	346.55401611328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KDKVGHKLI_	REV__ENST00000569826.2_1_15:42864283-42864628:+|nuORF	20.94693142431847	0.3660861156085067	6				NaN	NaN	0	NaN	15	2026	2040
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2058	10.83	NaN	6425.8	30	0	923.92	0.145	+			21135	KKSRSTIQNP	10	73	579.8325501340325	1157.650547334865	2	579.8338623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KKSRSTIQNP_	ENSG00000162407|ENST00000371250|PLPP3	117.5257442709337	0.03082425562130952	6				NaN	NaN	0	NaN	18	2038	2057
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2064	10.848	NaN	1574.4	30	0	449.64	0.145	+			9467	EKPYKCNSCGK	11	31	628.7938809688221	NaN	0	628.7940063476562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EKPYKCNSCGK_	ENSG00000178917|ENST00000436261|ZNF852;ENSG00000198464|ENST00000595962|ZNF480;nc|ENSG00000178917|Q6ZMS4|ZNF852;nc|ENSG00000198464|Q8WV37-2|ZNF480;nc|ENSG00000198464|Q8WV37-3|ZNF480	16.71738777980365	0.456735970842152	6				NaN	NaN	0	NaN	21	2041	2063
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2078	10.912	NaN	1806.6	30	0	662.88	0.145	+			22671	KTYTGHKNEK	10	45	603.3162052008923	1204.6178574685846	2	603.8197021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTYTGHKNEK_	ENSG00000196363|ENST00000358625|WDR5;ENSG00000196981|ENST00000330689|WDR5B	79.03558427241974	0.20350015593366697	6				NaN	NaN	0	NaN	23	2053	2077
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2091	10.975	NaN	1712.3	30	0	390.2	0.144	+			1851	AIKKNNPRK	9	38	534.8344893349013	1067.6544257366024	2	534.8363647460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AIKKNNPRK_	ENSG00000060138|ENST00000228251|YBX3;ENSG00000065978|ENST00000321358|YBX1;ENST00000542002.5_1_12:10853889-10868397:-|nuORF;nc|ENSG00000060138|P16989-2|YBX3;nc|ENSG00000060138|P16989-3|YBX3	35.61828744233558	0.47037581924408073	6				NaN	NaN	0	NaN	24	2065	2090
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2096	10.991	NaN	1556.2	30	0	322.06	0.144			+	9487	EKSEKRALN	9	47	537.7992855861658	1073.5840182391314	2	537.8004760742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EKSEKRALN_	REV__ENSG00000169218|ENST00000356545|RSPO1;REV__nc|ENSG00000169218|Q2MKA7-2|RSPO1;REV__nc|ENSG00000169218|Q2MKA7-3|RSPO1	58.78195531508484	0.22376836668196862	6				NaN	NaN	0	NaN	26	2068	2095
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2100	11.007	NaN	3147.3	30	0	1144.1	0.145	+			18069	IKEKALIDMY	10	39	612.3384759100712	1222.6623988869424	2	612.3403930664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IKEKALIDMY_	ENSG00000244067|ENST00000493422|GSTA2	44.116797842482775	0.5112108506279902	6				NaN	NaN	0	NaN	27	2071	2099
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2109	11.04	NaN	1717.6	30	0	335.24	0.145	+			45130	TVKPGAKKDTK	11	40	586.8552726646544	NaN	0	586.856201171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVKPGAKKDTK_	ENSG00000106541|ENST00000419304|AGR2	45.908116695636124	0.34470816508309304	6				NaN	NaN	0	NaN	30	2077	2108
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2113	11.056	NaN	1094.9	30	0	178.99	0.142	+			4531	ATKSPAKPK	9	40	464.2838383623418	926.5531237914836	2	464.2848815917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATKSPAKPK_	ENSG00000184357|ENST00000331442|H1-5	52.936696900407355	0.27249468807391813	6				NaN	NaN	0	NaN	31	2080	2112
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2128	11.12	NaN	7679.8	30	0	2566.3	0.214	+			3519	ASSKDAIKKK	10	67	538.3267466423179	1074.6389403514356	2	538.3282470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASSKDAIKKK_	DSTN|p.Y117H|1|0.26|ENSG00000125868|chr20:17604592-17604592|T/C|missense_variant;ENSG00000125868|ENST00000246069|DSTN;ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65623104-65623215:-|nuORF;nc|ENSG00000125868|P60981-2|DSTN;nc|ENSG00000165410|Q9Y281-3|CFL2	88.17693792209575	0.14151128060301246	6				NaN	NaN	0	NaN	34	2092	2127
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2129	11.124	NaN	3548.5	30	0	1510	0.106	+			46691	VGKGRLWFL	9	38	359.2198884958576	1074.637836087773	3	359.220947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VGKGRLWFL_	ENST00000321407.2_1_7:127221824-127222049:-|nuORF	27.882242232435846	0.5426732730940306	6				NaN	NaN	0	NaN	35	2092	2127
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2130	11.126	NaN	859.42	30	0	152.89	0.035			+	35653	SCSLRFKR	8	15	498.7745361328125	NaN	0	498.7745361328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SCSLRFKR_	REV__ENSG00000139182|ENST00000266546|CLSTN3;REV__ENST00000542663.1_1_12:7303141-7303664:+|nuORF;REV__nc|ENSG00000139182|Q9BQT9-2|CLSTN3	12.206847966760668	1.7418937515398478	6				NaN	NaN	0	NaN	36	2092	2127
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2135	11.141	NaN	4561.4	30	0	1264.8	0.144	+			6023	AVMEKQKKK	9	57	545.3252588082497	1088.6359646832993	2	545.3275146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVMEKQKKK_	ENSG00000131037|ENST00000201647|EPS8L1;ENST00000587715.1_1_19:55598611-55598979:+|nuORF;ENST00000589362.5_1_19:55593317-55598979:+|nuORF;nc|ENSG00000131037|Q8TE68-2|EPS8L1;nc|ENSG00000131037|Q8TE68-3|EPS8L1;nc|ENSG00000131037|Q8TE68-4|EPS8L1	74.1650062923329	0.12277912660386392	6				NaN	NaN	0	NaN	38	2095	2134
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2140	11.157	NaN	2529.3	30	0	895.17	0.145			+	6183	AVQMEKKKK	9	31	363.8854228700865	1088.6344392104595	3	363.8867492675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVQMEKKKK_	REV__ENSG00000115970|ENST00000405975|THADA;REV__nc|ENSG00000115970|Q6YHU6-3|THADA;REV__nc|ENSG00000115970|Q6YHU6-5|THADA;REV__nc|ENSG00000115970|Q6YHU6-6|THADA;REV__THADA|p.A593Lfs*5|2|0.35|ENSG00000115970|chr2:43572945-43572945|C/-|frameshift_variant	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	40	2098	2139
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2145	11.175	NaN	2165.6	30	0	690.51	0.214				-1	QLQRMFDN	8	42	534.2500264468819	1066.4854999605636	2	534.2518920898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_QLQRM(Oxidation (M))FDN_	ENSG00000166439|ENST00000299563|RNF169	30.503639358989545	0.7238069182250283	6				NaN	NaN	0	NaN	42	2101	2144
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2146	11.178	NaN	2185.8	30	0	812.82	0.035			+	19371	KALISKNEF	9	31	525.3050280214318	1048.5955031096635	2	525.3067626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KALISKNEF_	REV__tr|U7ST53|U7ST53_FUSNUProbablecelldivisionproteinWhiAOS=FusobacteriumnucleatumCTI-5OX=1316586GN=whiAPE=3SV=1	34.172542307311794	0.4838870758800184	6				NaN	NaN	0	NaN	43	2101	2144
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2151	11.193	NaN	8588.6	30	0	1976.7	0.143	+			40146	STQKGQIKK	9	57	509.30524941198536	1016.5959458907707	2	509.3067626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STQKGQIKK_	ENSG00000171241|ENST00000303383|SHCBP1	131.03138772384656	0.014687601201650916	6				NaN	NaN	0	NaN	45	2104	2150
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2155	11.209	NaN	2288.4	30	0	378.72	0.215	+			5490	AVADAQKRK	9	47	493.7895668074959	985.5645806817918	2	493.7909240722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVADAQKRK_	ENSG00000161526|ENST00000584667|SAP30BP;ENST00000293208.13_1_17:73701692-73702598:+|nuORF;ENST00000578756.5_1_17:73699860-73702598:+|nuORF;ENST00000580322.5_1_17:73702024-73702598:+|nuORF;ENST00000580601.5_1_17:73689468-73702598:+|nuORF;ENST00000583329.5_1_17:73699767-73702598:+|nuORF;nc|ENSG00000161526|Q9UHR5-2|SAP30BP	78.26377905018397	0.10505600812668463	6				NaN	NaN	0	NaN	46	2107	2154
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2156	11.213	NaN	2168.5	30	0	358.33	0.036			+	-1	SHDRSIVACA	10	30	558.2661852822325	1114.517817631265	2	558.2681884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SHDRSIVAC(Carbamidomethyl (C))A_	REV__ENST00000542933.5_1_12:122233718-122234021:-|nuORF	21.9598887501803	0.7004979571547932	6				NaN	NaN	0	NaN	47	2107	2154
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2160	11.227	NaN	2110.9	30	0	633.96	0.145			+	31402	QKKQEKITAR	10	51	615.3711534369966	NaN	0	615.3717041015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QKKQEKITAR_	REV__ENST00000394780.7_2_X:110963351-110964906:+|nuORF	41.42661286455405	0.3598046802465243	6				NaN	NaN	0	NaN	48	2110	2159
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2170	11.274	NaN	5217.6	30	0	1611.3	0.144			+	21802	KQYTVSAQK	9	60	526.7896810099045	1051.5648090866089	2	526.7915649414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KQYTVSAQK_	REV__ENSG00000162512|ENST00000339394|SDC3	101.60071028292904	0.0375685401170269	6				NaN	NaN	0	NaN	49	2119	2169
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2174	11.29	NaN	2084.1	30	0	816.86	0.143			+	50767	YEKPAIIW	8	26	510.2822881499433	1018.5500233666867	2	510.2834167480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YEKPAIIW_	REV__ENSG00000263761|ENST00000581492|GDF2	12.959181472943097	0.7887000251064199	6				NaN	NaN	0	NaN	50	2122	2173
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2180	11.307	NaN	5205.1	30	0	1560.2	0.214			+	31068	QFAILLSY	8	45	477.76868940620676	953.5228258792135	2	477.7696228027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QFAILLSY_	REV__ENSG00000167103|ENST00000388747|PIP5KL1;REV__ENST00000464759.5_1_9:130684128-130689655:-|nuORF;REV__nc|ENSG00000167103|Q5T9C9-2|PIP5KL1	28.2542754592877	0.7411748056684583	6				NaN	NaN	0	NaN	53	2125	2179
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2181	11.311	NaN	2979.7	30	0	753.12	0.035			+	30804	QEAPAGHRY	9	52	514.7504213227575	1027.4862897123148	2	514.751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QEAPAGHRY_	REV__ENSG00000054690|ENST00000329153|PLEKHH1;REV__ENST00000561370.5_1_14:68048786-68054020:+|nuORF	42.396135135203025	0.392153681582562	6				NaN	NaN	0	NaN	54	2125	2179
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2190	11.342	NaN	3368.5	30	0	476.92	0.215	+			41456	SVNNKVSKK	9	52	502.2975397357357	1002.5805265382714	2	502.2994384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVNNKVSKK_	ENSG00000188938|ENST00000375412|FAM120AOS	83.6470233535746	0.08277643980271215	6				NaN	NaN	0	NaN	57	2131	2189
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2191	11.346	NaN	2594.2	30	0	855.41	0.036	+			21598	KPKEKKKGP	9	44	347.22474170054136	1038.6523957018242	3	347.2257995605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KPKEKKKGP_	ENSG00000237452|ENST00000457052|MEIOSIN	32.81241826257853	0.4965981579233955	6				NaN	NaN	0	NaN	58	2131	2189
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2195	11.36	NaN	1693.3	30	0	448.83	0.214				-1	 	0	39	436.7318335282238	871.4491141232476	2	436.73291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	59	2134	2194
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2196	11.364	NaN	2049.3	30	0	279.37	0.036			+	35756	SDVEETFFK	9	39	551.2586309705132	1100.5027090078263	2	551.7610473632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SDVEETFFK_	REV__ENSG00000177646|ENST00000308982|ACAD9	24.20275056022122	0.577060078256802	6				NaN	NaN	0	NaN	60	2134	2194
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2201	11.379	NaN	4611.9	30	0	733.43	0.144			+	35668	SDEDRKTVK	9	60	539.2814678298981	1076.5483827265962	2	539.2830810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SDEDRKTVK_	REV__ENSG00000056586|ENST00000357244|RC3H2;REV__ENSG00000135870|ENST00000367696|RC3H1;REV__nc|ENSG00000056586|Q9HBD1-2|RC3H2;REV__nc|ENSG00000056586|Q9HBD1-3|RC3H2;REV__nc|ENSG00000056586|Q9HBD1-4|RC3H2;REV__nc|ENSG00000056586|Q9HBD1-6|RC3H2;REV__nc|ENSG00000135870|Q5TC82-2|RC3H1;REV__RC3H2|p.F582Mfs*6|1|0.08|ENSG00000056586|chr9:122860022-122860023|-/AAAAGAAACAT|frameshift_variant;REV__RC3H2|p.T1132Qfs*5|1|0.29|ENSG00000056586|chr9:122849809-122849809|T/-|frameshift_variant	58.22992032128504	0.22837015374068087	6				NaN	NaN	0	NaN	62	2137	2200
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2206	11.395	NaN	2126	30	0	328.35	0.212	+			30934	QELQEKNKSLG	11	57	637.3396992305284	1272.6648455278566	2	637.342041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QELQEKNKSLG_	ENST00000491507.1_1_3:75790944-75832513:-|nuORF	72.2432373244024	0.21703855426835802	6				NaN	NaN	0	NaN	64	2140	2205
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2207	11.399	NaN	1808.2	30	0	323.07	0.106	+			40090	STNSNLSKHKK	11	55	622.342041015625	NaN	0	622.342041015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STNSNLSKHKK_	ENSG00000141956|ENST00000398548|PRDM15;nc|ENSG00000141956|P57071-2|PRDM15;nc|ENSG00000141956|P57071-3|PRDM15;nc|ENSG00000141956|P57071|PRDM15	72.28901530423826	0.11987941406509271	6				NaN	NaN	0	NaN	65	2140	2205
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2208	11.401	NaN	492.18	30	0	107.32	0.035	+			38729	SSLILKTLQ	9	22	501.81121826171875	NaN	0	501.81121826171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSLILKTLQ_	TNFRSF19|p.A359Lfs*25|1|0.31|ENSG00000127863|chr13:23668924-23668924|G/-|frameshift_variant	14.137123925751023	0.3891339986947948	6				NaN	NaN	0	NaN	66	2140	2205
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2212	11.415	NaN	16097	30	0	3376.9	0.214	+			22905	KVMKDAKTK	9	76	524.8113514097529	1047.6081498863057	2	524.8140258789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVMKDAKTK_	ENSG00000198900|ENST00000361337|TOP1	148.6902309647307	0.00717441509122429	6				NaN	NaN	0	NaN	67	2143	2211
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2213	11.418	NaN	5226.7	30	0	2773	0.036				-1	PLMELPLMI	9	41	536.7909414442081	1071.567329955216	2	536.7927856445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_PLM(Oxidation (M))ELPLMI_	ENSG00000167548|ENST00000301067|KMT2D;nc|ENSG00000167548|O14686-3|KMT2D	21.70233525837049	0.6004277881119521	6				NaN	NaN	0	NaN	68	2143	2211
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2221	11.437	NaN	2558.5	30	0	576.56	0.214	+			30178	PSHSRSAHHP	10	23	556.7696607454876	1111.5247685577751	2	556.7710571289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PSHSRSAHHP_	ENST00000585812.5_1_17:59431721-59456358:+|nuORF;ENST00000592702.5_1_17:59431721-59469483:+|nuORF	12.206847966760668	0.7544206824696849	6				NaN	NaN	0	NaN	73	2146	2220
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2222	11.44	NaN	1784.4	30	0	579.33	0.106			+	23909	LDLESALPTQ	10	34	543.7867431640625	NaN	0	543.7867431640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LDLESALPTQ_	REV__ENSG00000163939|ENST00000707071|PBRM1;REV__nc|ENSG00000163939|Q86U86-2|PBRM1;REV__nc|ENSG00000163939|Q86U86-3|PBRM1;REV__nc|ENSG00000163939|Q86U86-5|PBRM1;REV__nc|ENSG00000163939|Q86U86-7|PBRM1;REV__nc|ENSG00000163939|Q86U86-8|PBRM1;REV__nc|ENSG00000163939|Q86U86-9|PBRM1;REV__nc|ENSG00000163939|Q86U86|PBRM1;REV__PBRM1|p.H1521Pfs*95|1|0.12|ENSG00000163939|chr3:52554771-52554772|-/G|frameshift_variant	25.57405402267927	0.4162033004763879	6				NaN	NaN	0	NaN	74	2146	2220
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2223	11.442	NaN	1692.3	30	0	328.14	0.106				-1	 	0	42	463.28111070461193	924.5476684760239	2	463.28228759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	75	2146	2220
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2224	11.444	NaN	2509.3	30	0	789.27	0.106			+	47527	VQQLSNSQDQ	10	24	573.7733764648438	NaN	0	573.7733764648438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VQQLSNSQDQ_	REV__ENSG00000105866|ENST00000222584|SP4	16.473147378115264	0.4201028297492154	6				NaN	NaN	0	NaN	76	2146	2220
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2225	11.446	NaN	1336.2	30	0	297.87	0.106			+	32045	QRSGTIGGDNP	11	33	551.27001953125	NaN	0	551.27001953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QRSGTIGGDNP_	REV__ZNF518B|p.N736S|1|0.24|ENSG00000178163|chr4:10444122-10444122|T/C|missense_variant	29.170058357718403	0.43541742044178583	6				NaN	NaN	0	NaN	77	2146	2220
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2226	11.448	NaN	1715.4	30	0	538.24	0.106	+			30091	PQSRSHKGCE	10	22	564.7681685165373	NaN	0	564.7678833007812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PQSRSHKGCE_	ENST00000554161.1_1_14:95983343-95983631:+|nuORF	25.57405402267927	0.4162033004763879	6				NaN	NaN	0	NaN	78	2146	2220
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2227	11.449	NaN	1256.6	30	0	617.22	0.038			+	29421	PCAQLPFNLW	10	16	594.79736328125	NaN	0	594.79736328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PCAQLPFNLW_	REV__ENST00000480537.5_1_2:220144555-220146923:+|nuORF	10.265252068803164	0.42010282974921537	6				NaN	NaN	0	NaN	79	2146	2220
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2234	11.468	NaN	6705.4	30	0	2772.2	0.214				-1	 	0	58	492.3024079593386	982.5902629854772	2	492.30389404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	83	2149	2233
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2235	11.472	NaN	918.42	30	0	153.19	0.037	+			38356	SRPIEDLFR	9	31	566.808084379462	1131.601615825724	2	566.8106689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SRPIEDLFR_	ENSG00000120685|ENST00000352251|PROSER1;nc|ENSG00000120685|Q86XN7-2|PROSER1	17.468008924990375	0.6112419832031292	6				NaN	NaN	0	NaN	84	2149	2233
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2244	11.503	NaN	2955	30	0	1031.9	0.143	+			8636	EDIAKYLR	8	27	504.28098555989044	1006.5474181865809	2	504.2829284667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EDIAKYLR_	ENSG00000164609|ENST00000297151|SLU7;ENST00000520841.1_1_5:159833399-159835410:-|nuORF	29.14955571784316	0.7342621283720113	6				NaN	NaN	0	NaN	87	2155	2243
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2248	11.52	NaN	7779.7	30	0	1052.1	0.214				-1	ILMMGNVSF	9	51	514.2516566929362	1026.4887604526723	2	514.2533569335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ILM(Oxidation (M))MGNVSF_	ENSG00000106714|ENST00000297668|CNTNAP3;ENSG00000154529|ENST00000377561|CNTNAP3B;ENSG00000283378|ENST00000636699|CNTNAP3C;nc|ENSG00000154529|Q96NU0-2|CNTNAP3B;nc|ENSG00000283378|Q9BZ76-2|CNTNAP3	29.14955571784316	0.5308295550522326	6				NaN	NaN	0	NaN	88	2158	2247
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2249	11.524	NaN	2406.2	30	0	645.82	0.106	+			147	AAIAEAAARPR	11	44	548.8138230079398	1095.6130930826796	2	548.8157958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AAIAEAAARPR_	ENST00000225726.9_1_17:61843531-61850919:-|nuORF;ENST00000403162.7_1_17:61850179-61850919:-|nuORF	24.519189625965996	0.7326048944360514	6				NaN	NaN	0	NaN	89	2158	2247
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2250	11.526	NaN	2634.8	30	0	637.47	0.106			+	31536	QLLHAAVES	9	35	484.26397755098856	966.5134021687771	2	484.2664489746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QLLHAAVES_	REV__ENSG00000163482|ENST00000295709|STK36;REV__nc|ENSG00000163482|Q9NRP7-2|STK36	17.364965105453717	0.6112419832031293	6				NaN	NaN	0	NaN	90	2158	2247
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2251	11.527	NaN	3335.9	30	0	1035.6	0.034			+	21601	KPKMHLTP	8	24	476.2777456809401	NaN	0	476.277099609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KPKMHLTP_	REV__ENSG00000051825|ENST00000606320|MPHOSPH9;REV__MPHOSPH9|p.K886Rfs*15|1|0.31|ENSG00000051825|chr12:123165407-123165414|TTTGCTTT/-|frameshift_variant;REV__MPHOSPH9|p.T1047Nfs*4|1|0.3|ENSG00000051825|chr12:123161377-123161378|-/T|frameshift_variant;REV__nc|ENSG00000051825|Q99550-2|MPHOSPH9	18.324413293986947	1.7418937515398478	6				NaN	NaN	0	NaN	91	2158	2247
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2260	11.547	NaN	22405	30	0	15014	0.214				-1	 	0	52	500.8277807145786	999.6410084959572	2	500.8291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	97	2161	2259
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2261	11.551	NaN	3752.6	30	0	933.14	0.106	+			24980	LLDHQRGH	8	21	488.26241404205103	NaN	0	488.2624206542969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LLDHQRGH_	ENSG00000124459|ENST00000269973|ZNF45;ZNF45|p.K442Nfs*98|2|0.28|ENSG00000124459|chr19:43914110-43914110|T/-|frameshift_variant	19.359975847455235	1.7418937515398478	6				NaN	NaN	0	NaN	98	2161	2259
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2262	11.553	NaN	3221.2	30	0	566.54	0.106	+			9385	EKEDTSNIN	9	43	525.2429211082407	1048.4712892832813	2	525.2442626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EKEDTSNIN_	ENSG00000051825|ENST00000606320|MPHOSPH9;ENST00000538250.5_1_12:123647559-123649972:-|nuORF;MPHOSPH9|p.T1047Nfs*4|1|0.3|ENSG00000051825|chr12:123161377-123161378|-/T|frameshift_variant;nc|ENSG00000051825|Q99550-2|MPHOSPH9	49.44154591367651	0.3095138337212152	6				NaN	NaN	0	NaN	99	2161	2259
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2263	11.555	NaN	2679.2	30	0	696.99	0.106			+	48748	VTVLCSDIH	9	25	493.75202643623	NaN	0	493.752197265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTVLCSDIH_	REV__nc|ENSG00000121486|Q7Z2T5-2|TRMT1L	17.364965105453717	0.37820932774828947	6				NaN	NaN	0	NaN	100	2161	2259
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2264	11.557	NaN	29563	30	0	20501	0.106				-1	 	0	40	334.2209312480869	999.6409643444608	3	334.5558776855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	101	2161	2259
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2265	11.558	NaN	1106.9	30	0	397.35	0.031				-1	 	0	26	364.2436579264384	726.4727629196768	2	364.2447509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	102	2161	2259
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2273	11.578	NaN	30961	30	0	4163.4	0.214	+			7756	DNPPRFPQK	9	71	549.7880788110052	1097.5616046888103	2	549.7901611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DNPPRFPQK_	CDH18|p.F431Sfs*39|1|0.25|ENSG00000145526|chr5:19543967-19543967|A/-|frameshift_variant;CDH18|p.I568Lfs*2|1|0.13|ENSG00000145526|chr5:19483482-19483482|G/-|frameshift_variant;CDH22|p.I579Sfs*4|1|0.33|ENSG00000149654|chr20:46178126-46178126|T/-|frameshift_variant;ENSG00000101542|ENST00000262717|CDH20;ENSG00000145526|ENST00000382275|CDH18;ENSG00000149654|ENST00000537909|CDH22;nc|ENSG00000145526|Q13634-2|CDH18	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	107	2164	2272
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2274	11.582	NaN	23554	30	0	14571	0.106				-1	 	0	55	512.8068868431387	1023.5992207530775	2	512.8084106445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	108	2164	2272
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2275	11.584	NaN	15718	30	0	5447.6	0.106	+			29358	PAARRRKK	8	62	328.2174088020981	981.6303970064943	3	328.2183837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PAARRRKK_	ENSG00000113141|ENST00000417647|IK;ENST00000434096.1_1_2:58688403-58689123:-|nuORF;IK|p.M189Rfs*54|1|0.04|ENSG00000113141|chr5:140654559-140654560|-/AA|frameshift_variant	20.481830146152948	0.8005983782650069	6				NaN	NaN	0	NaN	109	2164	2272
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2276	11.586	NaN	7449	30	0	2040.6	0.106	+			33365	RHPHKGIPP	9	32	519.8019150991182	1037.5892772650363	2	519.8035888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RHPHKGIPP_	ENSG00000186862|ENST00000619208|PDZD7	12.206847966760668	0.6112419832031292	6				NaN	NaN	0	NaN	110	2164	2272
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2277	11.587	NaN	6994.1	30	0	3406.8	0.106			+	11553	FPIPSLYDL	9	23	532.7859397007552	1063.5573264683103	2	532.7876586914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FPIPSLYDL_	REV__ENSG00000229474|ENST00000682850|PATL2;REV__ENST00000560780.1_2_15:44964301-44966556:-|nuORF	14.137123925751023	0.6112419832031292	6				NaN	NaN	0	NaN	111	2164	2272
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2278	11.589	NaN	3947.9	30	0	849.92	0.106				-1	 	0	41	490.7938267323546	979.5731005315092	2	490.795166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	112	2164	2272
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2279	11.591	NaN	6001.6	30	0	3176.3	0.035	+			25520	LPTALTMKTA	10	30	523.7979491058896	1045.5813452785792	2	523.7998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LPTALTMKTA_	ENST00000499217.6_1_15:74753894-74753933:+|nuORF	14.137123925751023	0.7446123510383054	6				NaN	NaN	0	NaN	113	2164	2272
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2291	11.617	NaN	4114.7	30	0	1067.6	0.214				-1	 	0	49	423.7727458714496	845.5309388096993	2	423.773681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	122	2167	2290
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2292	11.621	NaN	1983.8	30	0	667.83	0.106				-1	 	0	41	392.2440523635584	782.4735517939168	2	392.2452087402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	123	2167	2290
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2293	11.622	NaN	10424	30	0	1820.2	0.106	+			27949	MVHTVLKLE	9	67	535.3080614073732	1068.6015698815463	2	535.309326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MVHTVLKLE_	ENST00000417455.1_1_10:44101451-44101670:-|nuORF	45.9519527083369	0.35044536499095585	6				NaN	NaN	0	NaN	124	2167	2290
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2294	11.624	NaN	988.6	30	0	268.23	0.106			+	1599	AGLKLAKK	8	34	414.78680419921875	NaN	0	414.78680419921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AGLKLAKK_	REV__ASS1|p.Q138Rfs*2|2|0.18|ENSG00000130707|chr9:130464154-130464154|C/-|frameshift_variant;REV__ENSG00000130707|ENST00000352480|ASS1	44.53106598305862	1.7418937515398478	6				NaN	NaN	0	NaN	125	2167	2290
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2295	11.626	NaN	2130.7	30	0	349.21	0.106	+			13155	GGRGGQGQEFK	11	30	560.7807006835938	NaN	0	560.7807006835938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GGRGGQGQEFK_	ENST00000555004.2_3_14:96555950-96556580:+|nuORF	17.468008924990375	0.456735970842152	6				NaN	NaN	0	NaN	126	2167	2290
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2296	11.628	NaN	749.9	30	0	177.81	0.106	+			20603	KGAPTPKR	8	24	427.7635192871094	NaN	0	427.7635192871094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KGAPTPKR_	ENSG00000166135|ENST00000299163|HIF1AN	38.80614096846853	1.7418937515398478	6				NaN	NaN	0	NaN	127	2167	2290
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2297	11.63	NaN	1205.4	30	0	733.53	0.034			+	33269	RGGQRFRA	8	20	474.2679138183594	NaN	0	474.2679138183594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RGGQRFRA_	REV__ENST00000423995.5_1_1:32706007-32706379:-|nuORF;REV__ENST00000426597.2_1_1:32705501-32706166:-|nuORF;REV__ENST00000441044.5_1_1:32706007-32706920:-|nuORF	13.775330524044264	1.7418937515398478	6				NaN	NaN	0	NaN	128	2167	2290
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2305	11.648	NaN	5615.3	30	0	645.77	0.214			+	44026	TPLSTDSCTSR	11	42	584.2681453685341	1166.521737803868	2	584.2699584960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TPLSTDSCTSR_	REV__TRRAP|p.P1292Lfs*17|1|0.44|ENSG00000196367|chr7:98933258-98933258|C/-|frameshift_variant	14.137123925751023	0.8042936413770803	6				NaN	NaN	0	NaN	133	2170	2304
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2306	11.652	NaN	6015.8	30	0	895.39	0.106	+			34259	RTHEHVSEK	9	69	561.7851809837821	1121.555809034364	2	561.786865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RTHEHVSEK_	CAST|p.E474Kfs*10|1|0.39|ENSG00000153113|chr5:96754695-96754695|A/-|frameshift_variant;ENSG00000153113|ENST00000675179|CAST;ENST00000507487.5_1_5:95998126-96062463:+|nuORF;ENST00000515160.5_1_5:95998126-96031662:+|nuORF;nc|ENSG00000153113|P20810-10|CAST;nc|ENSG00000153113|P20810-5|CAST;nc|ENSG00000153113|P20810-7|CAST;nc|ENSG00000153113|P20810-9|CAST	147.30332882356183	0.0074976797444588125	6				NaN	NaN	0	NaN	134	2170	2304
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2307	11.653	NaN	2293.6	30	0	445.49	0.035			+	32182	QSSMSQKVE	9	34	512.2432250976562	NaN	0	512.2432250976562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QSSMSQKVE_	REV__ENSG00000107282|ENST00000265381|APBA1;REV__nc|ENSG00000107282|Q02410-2|APBA1	31.529811441608018	0.3183796599642538	6				NaN	NaN	0	NaN	135	2170	2304
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2313	11.67	NaN	10955	30	0	1634.8	0.214	+			14739	GTKAQVERK	9	67	508.7948358929672	1015.5751188527345	2	508.7969665527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTKAQVERK_	ENSG00000158769|ENST00000368026|F11R;ENST00000335772.3_1_1:160972398-160990872:-|nuORF;ENST00000602966.1_1_1:160970859-160990872:-|nuORF;nc|ENSG00000158769|Q9Y624-2|F11R	94.4091291819064	0.0524345700464502	6				NaN	NaN	0	NaN	138	2173	2312
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2314	11.674	NaN	4027.1	30	0	648.88	0.106	+			34216	RTEDHPCQK	9	50	557.2573559999217	1112.5001590666434	2	557.7608642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RTEDHPCQK_	ENSG00000105258|ENST00000221859|POLR2I;ENST00000586439.1_1_19:36604659-36605969:-|nuORF;ENST00000589591.5_1_19:36604659-36605638:-|nuORF	65.15724298150197	0.17062369902793603	6				NaN	NaN	0	NaN	139	2173	2312
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2315	11.676	NaN	1439.4	30	0	638.88	0.035			+	31982	QRDKIVKSG	9	27	515.8028759334654	1029.5911989337308	2	515.8045654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QRDKIVKSG_	REV__tr|U7ST22|U7ST22_FUSNURibonucleaseJOS=FusobacteriumnucleatumCTI-5OX=1316586GN=rnjPE=3SV=1	26.69291269510374	0.5537881896960711	6				NaN	NaN	0	NaN	140	2173	2312
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2321	11.69	NaN	1923.6	30	0	724.52	0.214				-1	LYHLPQDI	8	17	520.7755126953125	NaN	0	520.7755126953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LYHLPQDI_	ENST00000491789.1_1_1:150071171-150116971:+|nuORF	9.47055586587303	1.741893751539848	6				NaN	NaN	0	NaN	143	2176	2320
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2322	11.694	NaN	1382.4	30	0	196.56	0.035			+	38527	SSDELAAKQV	10	40	524.2695104986716	1046.524468064143	2	524.2711791992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSDELAAKQV_	REV__ENSG00000151491|ENST00000281172|EPS8;REV__nc|ENSG00000151491|Q12929-2|EPS8	39.252832667884924	0.5560298534376815	6				NaN	NaN	0	NaN	144	2176	2320
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2326	11.708	NaN	932.48	30	0	117.54	0.145				-1	HEKSCDVKM	9	39	575.2542627853289	1148.4939726374578	2	575.2564697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_HEKSC(Carbamidomethyl (C))DVKM(Oxidation (M))_	ENSG00000130165|ENST00000252445|ELOF1	36.446750945000026	0.4619375763483977	6				NaN	NaN	0	NaN	145	2179	2325
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2331	11.726	NaN	1580.5	30	0	211.37	0.214	+			40323	STSTSSMKK	9	45	478.73994953423045	NaN	0	478.7399597167969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STSTSSMKK_	ENSG00000047849|ENST00000683076|MAP4;MAP4|p.R919Gfs*14|1|0.44|ENSG00000047849|chr3:47870917-47870917|G/-|frameshift_variant;MAP4|p.T960Qfs*35|1|0.3|ENSG00000047849|chr3:47869309-47869309|T/-|frameshift_variant;MAP4|p.V999*|1|0.25|ENSG00000047849|chr3:47867318-47867318|T/-|frameshift_variant;nc|ENSG00000047849|P27816-2|MAP4;nc|ENSG00000047849|P27816-4|MAP4;nc|ENSG00000047849|P27816-5|MAP4;nc|ENSG00000047849|P27816-6|MAP4;nc|ENSG00000047849|P27816|MAP4	47.657333605630114	0.2228375344433429	6				NaN	NaN	0	NaN	147	2182	2330
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2332	11.729	NaN	1946.7	30	0	324.11	0.106			+	31890	QQEIINLGR	9	52	535.8008758057481	1069.587198678296	2	535.8020629882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QQEIINLGR_	REV__ENSG00000134668|ENST00000360482|SPOCD1;REV__nc|ENSG00000134668|Q6ZMY3-2|SPOCD1;REV__nc|ENSG00000134668|Q6ZMY3-3|SPOCD1;REV__nc|ENSG00000134668|Q6ZMY3-4|SPOCD1	68.78682469695295	0.14603441672067394	6				NaN	NaN	0	NaN	148	2182	2330
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2333	11.731	NaN	1167.1	30	0	217.58	0.106	+			19442	KAQTKAPPK	9	33	484.7981345044842	NaN	0	484.7981262207031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KAQTKAPPK_	ENSG00000166197|ENST00000605788|NOLC1;nc|ENSG00000166197|Q14978-2|NOLC1;nc|ENSG00000166197|Q14978-3|NOLC1	40.77816245573522	0.2702456086868081	6				NaN	NaN	0	NaN	149	2182	2330
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2334	11.733	NaN	2546	30	0	296.7	0.036	+			34346	RTQDLKTKK	9	50	559.3367836290487	1116.6590143248973	2	559.340087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RTQDLKTKK_	BMS1|p.L617Afs*20|1|0.26|ENSG00000165733|chr10:42797085-42797086|-/A|frameshift_variant;ENSG00000165733|ENST00000374518|BMS1;ENST00000399449.3_1_10:75487125-75488312:-|nuORF;ENST00000453174.7_2_10:81666360-81667538:+|nuORF	77.31757898189308	0.1091473830098891	6				NaN	NaN	0	NaN	150	2182	2330
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2339	11.747	NaN	6993.8	30	0	2565.1	0.214	+			45764	VAFNPFLIPG	10	52	537.8029894050329	1073.5914258768657	2	537.80517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VAFNPFLIPG_	ENSG00000124177|ENST00000373233|CHD6;ENST00000480022.1_1_20:40033235-40042188:-|nuORF	22.579656572578934	0.6954366826851017	6				NaN	NaN	0	NaN	152	2185	2338
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2340	11.751	NaN	2702.7	30	0	1135.7	0.106			+	33234	RGAADGPHAAV	11	45	511.2624745364711	1020.5103961397422	2	511.2647399902344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RGAADGPHAAV_	REV__ENST00000469090.5_1_17:27942519-27943125:-|nuORF	27.882242232435846	0.6973292152807183	6				NaN	NaN	0	NaN	153	2185	2338
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2341	11.753	NaN	2142.2	30	0	329.19	0.106	+			3973	ATATPSKTR	9	40	466.7613752050165	931.5081974768331	2	466.761962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATATPSKTR_	ENSG00000117983|ENST00000529681|MUC5B;ENSG00000117983|ENST00000529681|MUC5B;ENSG00000117983|ENST00000529681|MUC5B;ENSG00000117983|ENST00000529681|MUC5B;MUC5B|p.E2447Vfs*233|1|0.15|ENSG00000117983|chr11:1244218-1244219|TG/-|frameshift_variant;MUC5B|p.E2929Gfs*98|1|0.13|ENSG00000117983|chr11:1245660-1245661|-/GC|frameshift_variant;MUC5B|p.E2929Gfs*98|1|0.13|ENSG00000117983|chr11:1245660-1245661|-/GC|frameshift_variant;MUC5B|p.P2717Qfs*3|2|0.21|ENSG00000117983|chr11:1245025-1245025|C/-|frameshift_variant;MUC5B|p.P3417Qfs*3|1|0.41|ENSG00000117983|chr11:1247125-1247125|C/-|frameshift_variant;MUC5B|p.P3417Qfs*3|1|0.41|ENSG00000117983|chr11:1247125-1247125|C/-|frameshift_variant;MUC5B|p.S3126Pfs*13|1|0.37|ENSG00000117983|chr11:1246251-1246251|C/-|frameshift_variant;MUC5B|p.S3126Pfs*13|1|0.37|ENSG00000117983|chr11:1246251-1246251|C/-|frameshift_variant;MUC5B|p.S3878Pfs*27|1|0.13|ENSG00000117983|chr11:1248507-1248507|C/-|frameshift_variant;MUC5B|p.S3878Pfs*27|1|0.13|ENSG00000117983|chr11:1248507-1248507|C/-|frameshift_variant;MUC5B|p.S3878Pfs*27|1|0.13|ENSG00000117983|chr11:1248507-1248507|C/-|frameshift_variant;MUC5B|p.S4017Lfs*56|1|0.22|ENSG00000117983|chr11:1248928-1248929|-/C|frameshift_variant;MUC5B|p.S4017Lfs*56|1|0.22|ENSG00000117983|chr11:1248928-1248929|-/C|frameshift_variant;MUC5B|p.S4017Lfs*56|1|0.22|ENSG00000117983|chr11:1248928-1248929|-/C|frameshift_variant;MUC5B|p.T4706Pfs*4|2|0.37|ENSG00000117983|chr11:1250996-1250996|A/-|frameshift_variant;MUC5B|p.T4706Pfs*4|2|0.37|ENSG00000117983|chr11:1250996-1250996|A/-|frameshift_variant;MUC5B|p.T4706Pfs*4|2|0.37|ENSG00000117983|chr11:1250996-1250996|A/-|frameshift_variant;MUC5B|p.T4706Pfs*4|2|0.37|ENSG00000117983|chr11:1250996-1250996|A/-|frameshift_variant	77.31757898189308	0.1091473830098891	6				NaN	NaN	0	NaN	154	2185	2338
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2342	11.755	NaN	4793.3	30	0	1406	0.037	+			27431	MLELLVQKK	9	40	373.22649418485287	1116.6576531547587	3	373.5625915527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_M(Oxidation (M))LELLVQKK_	ENSG00000143207|ENST00000367669|COP1;ENST00000579008.1_1_18:8412788-8413139:+|nuORF;nc|ENSG00000143207|Q8NHY2-2|COP1;nc|ENSG00000143207|Q8NHY2-4|COP1	58.22992032128504	0.22837015374068087	6				NaN	NaN	0	NaN	155	2185	2338
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2348	11.771	NaN	946.23	30	0	151.87	0.145	+			28233	NCLLVTWVTNR	11	25	659.8502467184506	NaN	0	659.8511962890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NCLLVTWVTNR_	ENSG00000101574|ENST00000574538|METTL4;ENST00000573134.1_1_18:2539001-2552773:-|nuORF	13.45404412870281	0.456735970842152	6				NaN	NaN	0	NaN	158	2188	2347
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2360	11.809	NaN	27999	30	0	9067.3	0.215	+			3517	ASSKDAIKK	9	76	474.27843829201987	946.5423236508398	2	474.279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASSKDAIKK_	DSTN|p.Y117H|1|0.26|ENSG00000125868|chr20:17604592-17604592|T/C|missense_variant;ENSG00000125868|ENST00000246069|DSTN;ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000400899.2_1_1:11051144-11051557:-|nuORF;ENST00000530945.1_1_11:65623104-65623215:-|nuORF;nc|ENSG00000125868|P60981-2|DSTN;nc|ENSG00000165410|Q9Y281-3|CFL2	120.30596017624542	0.02101454110788768	6				NaN	NaN	0	NaN	164	2194	2359
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2361	11.812	NaN	7460.7	30	0	3064.9	0.106	+			30703	QDEEDRIE	8	69	517.2271539657653	1032.4397549983305	2	516.7939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QDEEDRIE_	ENSG00000164691|ENST00000367066|TAGAP;nc|ENSG00000164691|Q8N103-2|TAGAP;nc|ENSG00000164691|Q8N103-4|TAGAP	84.9155231211612	0.2928622555056503	6				NaN	NaN	0	NaN	165	2194	2359
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2362	11.814	NaN	12642	30	0	2941	0.106	+			29547	PEPCLDALMG	10	57	523.2386561438922	1044.4627593545843	2	523.2402954101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PEPCLDALMG_	RBFOX3|p.I247Sfs*77|1|0.35|ENSG00000167281|chr17:79097309-79097309|G/-|frameshift_variant	35.61828744233558	0.588957954432594	6				NaN	NaN	0	NaN	166	2194	2359
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2363	11.816	NaN	1820.8	30	0	331.28	0.106	+			48088	VSSYRGRK	8	40	476.7681076622967	951.5216623913934	2	476.76910400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSSYRGRK_	ENSG00000116396|ENST00000438661|KCNC4;ENST00000489935.1_1_1:110754121-110766653:+|nuORF;nc|ENSG00000116396|Q03721-2|KCNC4;nc|ENSG00000116396|Q03721|KCNC4	38.80614096846853	0.6637206697844082	6				NaN	NaN	0	NaN	167	2194	2359
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2364	11.818	NaN	1006.8	30	0	168.63	0.036			+	11294	FKLSCVTEGL	10	21	548.7908935546875	NaN	0	548.7908935546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FKLSCVTEGL_	REV__ENSG00000167702|ENST00000645548|KIFC2;REV__ENST00000301332.2_1_8:145698463-145698769:+|nuORF	14.137123925751023	0.4201028297492154	6				NaN	NaN	0	NaN	168	2194	2359
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2372	11.836	NaN	76170	30	0	41295	0.214	+			34433	RTVGVSKKK	9	102	334.8854543184336	NaN	0	334.8854675292969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTVGVSKKK_	ENSG00000231500|ENST00000439602|RPS18;ENST00000412454.1_1_17:14608395-14608521:-|nuORF	106.88024417677582	0.01251452808581555	6				NaN	NaN	0	NaN	173	2197	2371
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2373	11.839	NaN	45551	30	0	10915	0.106			+	22000	KSFMCLIK	8	76	485.26684440506085	968.5191358769217	2	485.26824951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KSFMCLIK_	REV__ENST00000557373.1_1_14:35344887-35344989:+|nuORF	60.97194046774394	0.49215940876911696	6				NaN	NaN	0	NaN	174	2197	2371
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2374	11.841	NaN	24345	30	0	9897.1	0.106			+	20294	KEPEQVNAA	9	57	493.25218112640323	984.4898093196065	2	493.25335693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEPEQVNAA_	REV__ENSG00000160214|ENST00000497547|RRP1;REV__ENST00000467112.5_1_21:45213150-45223652:+|nuORF;REV__ENST00000471909.1_1_21:45217249-45223652:+|nuORF	54.776311868738084	0.25715957988447635	6				NaN	NaN	0	NaN	175	2197	2371
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2375	11.843	NaN	40464	30	0	18746	0.106			+	15782	GVTSFKLFK	9	69	513.8020963962645	1025.5896398593288	2	513.8040161132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GVTSFKLFK_	REV__ENST00000482487.5_1_13:50070137-50095117:+|nuORF	42.396135135203025	0.392153681582562	6				NaN	NaN	0	NaN	176	2197	2371
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2376	11.845	NaN	30550	30	0	9791.7	0.106			+	8987	EFQDPIQQ	8	63	502.7365894232973	1003.4586259133946	2	502.73876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EFQDPIQQ_	REV__DCDC1|p.F176Lfs*20|1|0.2|ENSG00000170959|chr11:30920862-30920862|A/-|frameshift_variant;REV__DCDC1|p.N526Mfs*10|1|0.2|ENSG00000170959|chr11:30905013-30905013|T/-|frameshift_variant;REV__ENSG00000170959|ENST00000684477|DCDC1;REV__ENST00000342355.8_1_11:30965860-31263019:-|nuORF;REV__nc|ENSG00000170959|M0R2J8|DCDC1	52.936696900407355	0.5717071646657654	6				NaN	NaN	0	NaN	177	2197	2371
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2377	11.847	NaN	35145	30	0	12788	0.106			+	29122	NTTVVDTFP	9	65	497.24845368298105	992.4823544327621	2	497.24981689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NTTVVDTFP_	REV__ENSG00000101558|ENST00000400000|VAPA;REV__ENSG00000124164|ENST00000475243|VAPB;REV__ENST00000265619.6_1_20:56965263-57014041:+|nuORF;REV__ENST00000563131.2_1_15:89744727-89744991:-|nuORF;REV__ENST00000577901.5_1_18:9914253-9936249:+|nuORF;REV__nc|ENSG00000101558|Q9P0L0-2|VAPA;REV__nc|ENSG00000124164|O95292-2|VAPB;REV__VAPA|p.K117Nfs*5|1|0.08|ENSG00000101558|chr18:9936997-9936997|A/-|frameshift_variant	35.61828744233558	0.47037581924408073	6				NaN	NaN	0	NaN	178	2197	2371
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2378	11.848	NaN	6009.6	30	0	1510.6	0.036			+	46667	VGGFGGALLNK	11	39	344.86456298828125	NaN	0	344.86456298828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VGGFGGALLNK_	REV__ENSG00000178537|ENST00000319017|SLC25A20	30.568863376406313	0.42918353898720446	6				NaN	NaN	0	NaN	179	2197	2371
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2392	11.876	NaN	65468	30	0	21204	0.123	+			38298	SQVDNSVQQ	9	78	502.7365894232973	1003.4586259133946	2	502.7386169433594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SQVDNSVQQ_	nc|ENSG00000013619|Q13495-3|MAMLD1	104.74654710444128	0.034358562718640136	6				NaN	NaN	0	NaN	190	2200	2391
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2399	11.895	NaN	24605	30	0	12612	0.17				-1	 	0	60	323.71495814442403	645.4153633556481	2	323.7159423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	194	2203	2398
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2400	11.897	NaN	72627	30	0	23923	0.106			+	29402	PASFQRCGQ	9	69	497.2303566477927	992.4461603623854	2	497.2319030761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PASFQRCGQ_	REV__TAP2|p.H661Qfs*41|1|0.24|ENSG00000204267|chr6:32828984-32828984|G/-|frameshift_variant	38.80614096846853	0.43426287593479557	6				NaN	NaN	0	NaN	195	2203	2398
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2401	11.899	NaN	35253	30	0	3775.9	0.106	+			27391	MKLRDFFGS	9	87	550.783510187283	1099.552467441366	2	550.785400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MKLRDFFGS_	ENSG00000149328|ENST00000535456|GLB1L2;ENST00000529077.5_1_11:134236970-134242406:+|nuORF	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	196	2203	2398
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2402	11.901	NaN	73373	30	0	21391	0.106				-1	PQESTKSCM	9	80	534.2297612296802	1066.4449695261603	2	534.2313842773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_PQESTKSC(Carbamidomethyl (C))M_	ENSG00000152503|ENST00000513154|TRIM36;nc|ENSG00000152503|Q9NQ86|TRIM36	34.172542307311794	0.4838870758800184	6				NaN	NaN	0	NaN	197	2203	2398
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2403	11.903	NaN	24042	30	0	14135	0.106			+	38186	SQDGLGAPHPR	11	46	567.7863685271547	1133.5581841211092	2	567.7883911132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SQDGLGAPHPR_	REV__ENST00000592120.5_2_16:4896808-4897351:+|nuORF	29.170058357718403	0.683821074385409	6				NaN	NaN	0	NaN	198	2203	2398
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2404	11.905	NaN	10133	30	0	1919.3	0.106	+			22053	KSKAGRPIK	9	79	328.88177348759086	NaN	0	328.8819580078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KSKAGRPIK_	ENST00000462537.3_1_6:36646575-36648628:+|nuORF	66.96192283764107	0.11962625698446946	6				NaN	NaN	0	NaN	199	2203	2398
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2405	11.907	NaN	24571	30	0	16950	0.036			+	32242	QTHADAFAVQ	10	38	544.2628492843024	1086.5111456354048	2	544.2645874023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QTHADAFAVQ_	REV__ENSG00000170382|ENST00000367177|LRRN2	17.468008924990375	0.7276870902328821	6				NaN	NaN	0	NaN	200	2203	2398
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2406	11.907	NaN	19938	30	0	4495.3	0.139				-1	 	0	65	438.75990540932276	875.5052578854455	2	438.7610778808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	201	2203	2398
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2415	11.927	NaN	11683	30	0	2709.6	0.214			+	31746	QPASQLIQR	9	45	520.7975952968619	1039.5806376605237	2	520.7987670898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QPASQLIQR_	REV__ENST00000371021.4_1_10:99080110-99080479:+|nuORF	34.172542307311794	0.4838870758800184	6				NaN	NaN	0	NaN	207	2206	2414
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2416	11.931	NaN	9512.2	30	0	4758.2	0.106			+	13290	GKAESIVHQS	10	43	528.2795193645319	1054.5444857958637	2	528.281005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GKAESIVHQS_	REV__ENSG00000090006|ENST00000396819|LTBP4;REV__ENST00000595529.1_1_19:41112383-41114583:+|nuORF;REV__LTBP4|p.A1409Hfs*20|2|0.32|ENSG00000090006|chr19:40627006-40627006|C/-|frameshift_variant;REV__LTBP4|p.P1326Hfs*103|1|0.2|ENSG00000090006|chr19:40624022-40624022|C/-|frameshift_variant;REV__LTBP4|p.P843Lfs*37|1|0.19|ENSG00000090006|chr19:40613089-40613089|C/-|frameshift_variant;REV__nc|ENSG00000090006|Q8N2S1-3|LTBP4;REV__nc|ENSG00000090006|Q8N2S1|LTBP4	18.262085536374414	0.7236521404371882	6				NaN	NaN	0	NaN	208	2206	2414
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2417	11.933	NaN	1095.3	30	0	261.5	0.106			+	22214	KSTVVKAG	8	36	395.24386960551107	788.4731862778222	2	395.2453918457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KSTVVKAG_	REV__ENST00000569494.5_3_16:57679871-57684200:+|nuORF	68.78682469695295	0.41700713582915416	6				NaN	NaN	0	NaN	209	2206	2414
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2418	11.935	NaN	4523.6	30	0	1190.2	0.106				-1	CRRMTGMCC	9	37	559.2144514200049	1116.4143499068098	2	559.2161865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_C(Carbamidomethyl (C))RRMTGMCC_	ENST00000601217.1_1_19:40946983-40947250:-|nuORF	17.364965105453717	0.6112419832031293	6				NaN	NaN	0	NaN	210	2206	2414
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2419	11.937	NaN	4850	30	0	2150.2	0.106			+	-1	QGSTCNNRP	9	47	517.2271539657653	1032.4397549983305	2	517.7305297851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_QGSTC(Carbamidomethyl (C))NNRP_	REV__ENSG00000166682|ENST00000299882|TMPRSS5	27.882242232435846	0.5426732730940306	6				NaN	NaN	0	NaN	211	2206	2414
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2420	11.938	NaN	4428.7	30	0	815.79	0.106	+			27056	MADEVICSEI	10	27	555.2468853783283	1108.4792178234566	2	555.2489013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MADEVICSEI_	ENSG00000258643|ENST00000678502|BCL2L2-PABPN1	15.641811463095205	0.7369665665077569	6				NaN	NaN	0	NaN	212	2206	2414
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2421	11.94	NaN	652.36	30	0	98.916	0.049				-1	 	0	20	640.023193359375	NaN	0	640.023193359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	213	2206	2414
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2439	11.977	NaN	5580.3	30	0	841.85	0.214	+			9703	EMIEALQK	8	66	481.25509774033105	960.4956425474621	2	481.2563171386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EMIEALQK_	ERCC3|p.E279A|1|0.31|ENSG00000163161|chr2:127288851-127288851|T/G|missense_variant	79.45101966838831	0.3281480470254892	6				NaN	NaN	0	NaN	228	2209	2438
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2440	11.981	NaN	1350.8	30	0	635.41	0.106			+	23105	KVVKSNKP	8	36	450.2870986284624	NaN	0	450.2868957519531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVVKSNKP_	REV__ENSG00000072041|ENST00000266682|SLC6A15;REV__nc|ENSG00000072041|Q9H2J7-2|SLC6A15;REV__SLC6A15|p.F116Sfs*21|3|0.16|ENSG00000072041|chr12:84886011-84886011|A/-|frameshift_variant;REV__SLC6A15|p.K680Tfs*24|1|0.02|ENSG00000072041|chr12:84861786-84861787|-/TCATTGTTCGTCGCTTCAACCTTATAGATGATAG|frameshift_variant;REV__SLC6A15|p.N518Kfs*21|1|0.04|ENSG00000072041|chr12:84867135-84867136|-/GTATATTTGCT|frameshift_variant;REV__SLC6A15|p.Q248Kfs*11|1|0.05|ENSG00000072041|chr12:84883873-84883874|-/TTTT|frameshift_variant	51.33545320467046	1.7418937515398478	6				NaN	NaN	0	NaN	229	2209	2438
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2441	11.983	NaN	1217.3	30	0	398.85	0.106			+	21569	KPEEPVKP	8	32	462.26637098708824	NaN	0	462.26605224609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KPEEPVKP_	REV__ENSG00000155657|ENST00000589042|TTN;REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-13|TTN;REV__nc|ENSG00000155657|Q8WZ42-13|TTN;REV__nc|ENSG00000155657|Q8WZ42-2|TTN;REV__nc|ENSG00000155657|Q8WZ42-2|TTN;REV__nc|ENSG00000155657|Q8WZ42-4|TTN;REV__nc|ENSG00000155657|Q8WZ42-4|TTN;REV__nc|ENSG00000155657|Q8WZ42-7|TTN;REV__nc|ENSG00000155657|Q8WZ42-7|TTN;REV__nc|ENSG00000155657|Q8WZ42-8|TTN;REV__nc|ENSG00000155657|Q8WZ42-8|TTN;REV__nc|ENSG00000155657|Q8WZ42|TTN;REV__nc|ENSG00000155657|Q8WZ42|TTN;REV__TTN|p.A12650Gfs*4|1|0.4|ENSG00000155657|chr2:178633489-178633490|-/T|frameshift_variant;REV__TTN|p.A12650Gfs*4|1|0.4|ENSG00000155657|chr2:178633489-178633490|-/T|frameshift_variant;REV__TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;REV__TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;REV__TTN|p.D20259Rfs*40|1|0.44|ENSG00000155657|chr2:178583105-178583106|-/T|frameshift_variant;REV__TTN|p.D20259Rfs*40|1|0.44|ENSG00000155657|chr2:178583105-178583106|-/T|frameshift_variant;REV__TTN|p.D21555Ifs*6|1|0.33|ENSG00000155657|chr2:178576659-178576659|G/-|frameshift_variant;REV__TTN|p.D21555Ifs*6|1|0.33|ENSG00000155657|chr2:178576659-178576659|G/-|frameshift_variant;REV__TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;REV__TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;REV__TTN|p.E15132Sfs*22|1|0.27|ENSG00000155657|chr2:178612094-178612094|C/-|frameshift_variant;REV__TTN|p.E15132Sfs*22|1|0.27|ENSG00000155657|chr2:178612094-178612094|C/-|frameshift_variant;REV__TTN|p.E20392Dfs*6|1|0.04|ENSG00000155657|chr2:178582357-178582358|-/TTTAAAATTA|frameshift_variant;REV__TTN|p.E20392Dfs*6|1|0.04|ENSG00000155657|chr2:178582357-178582358|-/TTTAAAATTA|frameshift_variant;REV__TTN|p.E20392Kfs*4|1|0.02|ENSG00000155657|chr2:178582359-178582360|-/TTTT|frameshift_variant;REV__TTN|p.E20392Kfs*4|1|0.02|ENSG00000155657|chr2:178582359-178582360|-/TTTT|frameshift_variant;REV__TTN|p.F18705Lfs*8|1|0.37|ENSG00000155657|chr2:178590687-178590687|A/-|frameshift_variant;REV__TTN|p.F18705Lfs*8|1|0.37|ENSG00000155657|chr2:178590687-178590687|A/-|frameshift_variant;REV__TTN|p.G12742Vfs*2|1|0.05|ENSG00000155657|chr2:178632983-178632983|C/-|frameshift_variant;REV__TTN|p.G12742Vfs*2|1|0.05|ENSG00000155657|chr2:178632983-178632983|C/-|frameshift_variant;REV__TTN|p.G14712Dfs*11|1|0.37|ENSG00000155657|chr2:178614341-178614341|G/-|frameshift_variant;REV__TTN|p.G14712Dfs*11|1|0.37|ENSG00000155657|chr2:178614341-178614341|G/-|frameshift_variant;REV__TTN|p.G19920Afs*12|1|0.42|ENSG00000155657|chr2:178584961-178584961|G/-|frameshift_variant;REV__TTN|p.G19920Afs*12|1|0.42|ENSG00000155657|chr2:178584961-178584961|G/-|frameshift_variant;REV__TTN|p.G22029Efs*22|2|0.13|ENSG00000155657|chr2:178575125-178575125|T/-|frameshift_variant;REV__TTN|p.G22029Efs*22|2|0.13|ENSG00000155657|chr2:178575125-178575125|T/-|frameshift_variant;REV__TTN|p.I24998Nfs*2|1|0.35|ENSG00000155657|chr2:178566216-178566217|-/T|frameshift_variant;REV__TTN|p.I24998Nfs*2|1|0.35|ENSG00000155657|chr2:178566216-178566217|-/T|frameshift_variant;REV__TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;REV__TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;REV__TTN|p.K10923Rfs*104|2|0.23|ENSG00000155657|chr2:178679362-178679362|T/-|frameshift_variant;REV__TTN|p.K10923Rfs*104|2|0.23|ENSG00000155657|chr2:178679362-178679362|T/-|frameshift_variant;REV__TTN|p.K11381Nfs*25|1|0.07|ENSG00000155657|chr2:178671133-178671133|T/-|frameshift_variant;REV__TTN|p.K11381Nfs*25|1|0.07|ENSG00000155657|chr2:178671133-178671133|T/-|frameshift_variant;REV__TTN|p.K11556Sfs*15|1|0.39|ENSG00000155657|chr2:178652287-178652287|T/-|frameshift_variant;REV__TTN|p.K11556Sfs*15|1|0.39|ENSG00000155657|chr2:178652287-178652287|T/-|frameshift_variant;REV__TTN|p.K14271Qfs*5|1|0.02|ENSG00000155657|chr2:178617351-178617352|-/G|frameshift_variant;REV__TTN|p.K14271Qfs*5|1|0.02|ENSG00000155657|chr2:178617351-178617352|-/G|frameshift_variant;REV__TTN|p.K26626Nfs*34|1|0.34|ENSG00000155657|chr2:178561331-178561331|T/-|frameshift_variant;REV__TTN|p.K26626Nfs*34|1|0.34|ENSG00000155657|chr2:178561331-178561331|T/-|frameshift_variant;REV__TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;REV__TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;REV__TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;REV__TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;REV__TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant;REV__TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant;REV__TTN|p.N13487Tfs*49|1|0.34|ENSG00000155657|chr2:178621335-178621335|T/-|frameshift_variant;REV__TTN|p.N13487Tfs*49|1|0.34|ENSG00000155657|chr2:178621335-178621335|T/-|frameshift_variant;REV__TTN|p.N15496Ifs*16|1|0.09|ENSG00000155657|chr2:178610116-178610116|T/-|frameshift_variant;REV__TTN|p.N15496Ifs*16|1|0.09|ENSG00000155657|chr2:178610116-178610116|T/-|frameshift_variant;REV__TTN|p.P16126Rfs*3|1|0.25|ENSG00000155657|chr2:178607301-178607302|TG/-|frameshift_variant;REV__TTN|p.P16126Rfs*3|1|0.25|ENSG00000155657|chr2:178607301-178607302|TG/-|frameshift_variant;REV__TTN|p.P22810Hfs*10|1|0.03|ENSG00000155657|chr2:178572780-178572781|-/AAAT|frameshift_variant;REV__TTN|p.P22810Hfs*10|1|0.03|ENSG00000155657|chr2:178572780-178572781|-/AAAT|frameshift_variant;REV__TTN|p.V10632Yfs*16|1|0.16|ENSG00000155657|chr2:178683254-178683254|T/-|frameshift_variant;REV__TTN|p.V11008Sfs*13|1|0.33|ENSG00000155657|chr2:178678146-178678147|-/T|frameshift_variant;REV__TTN|p.V11008Sfs*13|1|0.33|ENSG00000155657|chr2:178678146-178678147|-/T|frameshift_variant;REV__TTN|p.V11345Ffs*4|1|0.4|ENSG00000155657|chr2:178672044-178672044|T/-|frameshift_variant;REV__TTN|p.V11345Ffs*4|1|0.4|ENSG00000155657|chr2:178672044-178672044|T/-|frameshift_variant;REV__TTN|p.V13823*|1|0.28|ENSG00000155657|chr2:178620027-178620027|C/-|frameshift_variant;REV__TTN|p.V13823*|1|0.28|ENSG00000155657|chr2:178620027-178620027|C/-|frameshift_variant;REV__TTN|p.V22573Cfs*4|2|0.31|ENSG00000155657|chr2:178573492-178573492|C/-|frameshift_variant;REV__TTN|p.V22573Cfs*4|2|0.31|ENSG00000155657|chr2:178573492-178573492|C/-|frameshift_variant;REV__TTN|p.V27442Cfs*4|1|0.05|ENSG00000155657|chr2:178558107-178558108|-/A|frameshift_variant;REV__TTN|p.V27442Cfs*4|1|0.05|ENSG00000155657|chr2:178558107-178558108|-/A|frameshift_variant	56.72105179125745	1.7418937515398478	6				NaN	NaN	0	NaN	230	2209	2438
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2442	11.984	NaN	3254.6	30	0	589.47	0.106	+			32837	RCPDYYEN	8	50	530.2173259164241	NaN	0	530.2173461914062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RCPDYYEN_	ENSG00000101442|ENST00000243903|ACTR5	27.882242232435846	1.7418937515398478	6				NaN	NaN	0	NaN	231	2209	2438
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2443	11.986	NaN	5491	30	0	2009.1	0.106	+			34738	RWRPSSPQ	8	55	507.26856913491986	1012.5225853366397	2	507.2691650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RWRPSSPQ_	ENST00000438189.6_1_11:67226126-67226375:+|nuORF	82.30502934623384	0.30436709589983096	6				NaN	NaN	0	NaN	232	2209	2438
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2444	11.988	NaN	1610	30	0	333.15	0.106				-1	MCLIMDKK	8	47	499.2469482421875	NaN	0	499.2469482421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_M(Oxidation (M))CLIMDKK_	ENST00000381340.7_1_12:26818868-26818943:-|nuORF;ITPR2|p.L479Ffs*33|1|0.04|ENSG00000123104|chr12:26666026-26666027|-/GGAACAAA|frameshift_variant	38.80614096846853	1.7418937515398478	6				NaN	NaN	0	NaN	233	2209	2438
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2445	11.99	NaN	2148	30	0	420.03	0.036			+	4333	ATGLVKLKGK	10	41	338.8938215656246	NaN	0	338.51513671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATGLVKLKGK_	REV__ENSG00000120694|ENST00000320027|HSPH1;REV__nc|ENSG00000120694|Q92598-2|HSPH1;REV__nc|ENSG00000120694|Q92598-3|HSPH1;REV__nc|ENSG00000120694|Q92598-4|HSPH1	28.081489160057373	0.40797012399963245	6				NaN	NaN	0	NaN	234	2209	2438
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2460	12.021	NaN	5490.3	30	0	1073.1	0.214	+			29411	PAVNPWDVL	9	65	505.77265179694956	NaN	0	505.7726745605469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PAVNPWDVL_	ENSG00000146360|ENST00000275169|GPR6;nc|ENSG00000146360|P46095-2|GPR6	37.15910966729921	0.2899585034171616	6				NaN	NaN	0	NaN	246	2212	2459
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2461	12.025	NaN	2267.5	30	0	531.93	0.106			+	-1	RVARGSIHC	9	31	528.2795193645319	1054.5444857958637	2	528.7933349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_RVARGSIHC(Carbamidomethyl (C))_	REV__RAMP1|p.P105H|1|0.3|ENSG00000132329|chr2:237911650-237911650|C/A|missense_variant	14.864876125193954	0.6112419832031293	6				NaN	NaN	0	NaN	247	2212	2459
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2462	12.027	NaN	2701.8	30	0	426.72	0.106			+	-1	QSMHMVLDD	9	56	546.2290352995627	NaN	0	545.8095092773438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_QSMHM(Oxidation (M))VLDD_	REV__ENSG00000101680|ENST00000389658|LAMA1;REV__ENST00000579014.5_1_18:6942080-7042306:-|nuORF	44.116797842482775	0.2472372736944149	6				NaN	NaN	0	NaN	248	2212	2459
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2463	12.029	NaN	604.23	30	0	82.091	0.106	+			16258	HEENLKTKKQQ	11	37	691.8733520507812	NaN	0	691.8733520507812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HEENLKTKKQQ_	ENSG00000136942|ENST00000348462|RPL35;ENST00000373570.8_1_9:127620199-127620799:-|nuORF;ENST00000433398.1_1_7:66071742-66071856:-|nuORF;ENST00000487431.1_1_9:127620199-127623861:-|nuORF	28.383774762235813	0.43892155336841665	6				NaN	NaN	0	NaN	249	2212	2459
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2464	12.03	NaN	1439.9	30	0	548.79	0.106	+			18516	ISKNITMFG	9	28	337.51751708984375	NaN	0	337.51751708984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ISKNITMFG_	tr|U7SGH4|U7SGH4_FUSNUToprimdomain-containingprotein(Fragment)OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02307PE=4SV=1	24.20275056022122	0.35506675290109213	6				NaN	NaN	0	NaN	250	2212	2459
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2465	12.032	NaN	1270.2	30	0	165.97	0.106			+	-1	GPEPGSMAASR	11	35	538.2445068359375	NaN	0	538.2445068359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_GPEPGSM(Oxidation (M))AASR_	REV__ENSG00000186480|ENST00000340368|INSIG1;REV__nc|ENSG00000186480|O15503-2|INSIG1	29.170058357718403	0.43541742044178583	6				NaN	NaN	0	NaN	251	2212	2459
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2466	12.034	NaN	1041.8	30	0	222.79	0.034			+	1706	AGVIRGQPK	9	31	463.28259375671115	NaN	0	463.282470703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AGVIRGQPK_	REV__F7|p.G216Afs*17|1|0.16|ENSG00000057593|chr13:113116836-113116836|G/-|frameshift_variant	31.954861631926434	0.3162336699109506	6				NaN	NaN	0	NaN	252	2212	2459
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2475	12.054	NaN	13553	30	0	1565.9	0.214	+			17059	HQTRRESR	8	77	535.2840064913308	1068.5534600494616	2	535.2860107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HQTRRESR_	ENSG00000196220|ENST00000383836|SRGAP3;ENST00000470951.5_1_3:9101821-9290635:-|nuORF;nc|ENSG00000196220|O43295-2|SRGAP3;nc|ENSG00000196220|O43295-3|SRGAP3;SRGAP3|p.N833Tfs*18|1|0.3|ENSG00000196220|chr3:8992966-8992966|T/-|frameshift_variant	69.6276240434122	0.4100012001731381	6				NaN	NaN	0	NaN	258	2215	2474
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2476	12.058	NaN	4749	30	0	2036.2	0.106	+			2889	ASASSLKKK	9	57	460.28216570446676	NaN	0	460.28204345703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASASSLKKK_	ENSG00000075618|ENST00000382361|FSCN1	90.60085204095205	0.040385177724871185	6				NaN	NaN	0	NaN	259	2215	2474
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2477	12.06	NaN	3683.2	30	0	604.96	0.106			+	44460	TSPLLCPVAS	10	59	494.2625790809003	986.5106052286006	2	494.26385498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TSPLLCPVAS_	REV__ENST00000392495.7_1_12:121206768-121206894:-|nuORF	42.396135135203025	0.5270658956260207	6				NaN	NaN	0	NaN	260	2215	2474
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2478	12.062	NaN	1694.3	30	0	267.16	0.106	+			10408	EVFSKLGLS	9	47	490.27711537275115	978.5396778123023	2	490.29254150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EVFSKLGLS_	ENSG00000075568|ENST00000186436|TMEM131;ENST00000485245.2_1_2:98373564-98375685:-|nuORF;TMEM131|p.S1746L|1|0.28|ENSG00000075568|chr2:97759023-97759023|G/A|missense_variant	42.396135135203025	0.392153681582562	6				NaN	NaN	0	NaN	261	2215	2474
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2479	12.063	NaN	10896	30	0	2551	0.106	+			38998	SSSFLVLMVS	10	50	357.1915618375959	1068.5528561129877	3	357.1925964355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSSFLVLMVS_	ENSG00000168703|ENST00000372785|WFDC12;WFDC12|p.E58Kfs*14|1|0.4|ENSG00000168703|chr20:45124173-45124173|C/-|frameshift_variant	35.15202426646627	0.5927656479315102	6				NaN	NaN	0	NaN	262	2215	2474
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2480	12.065	NaN	1596.6	30	0	756.05	0.106			+	9988	ERKPGPTK	8	44	456.766357421875	NaN	0	456.766357421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ERKPGPTK_	REV__ENSG00000101407|ENST00000373447|TTI1;REV__TTI1|p.L924Wfs*37|2|0.15|ENSG00000101407|chr20:37999211-37999211|G/-|frameshift_variant	44.116797842482775	1.7418937515398478	6				NaN	NaN	0	NaN	263	2215	2474
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2481	12.067	NaN	3885.6	30	0	915.2	0.035	+			17478	ICRKLKLH	8	46	505.818503041694	1009.622453150188	2	505.8202819824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ICRKLKLH_	L1PA6_dup546|chr2:49227587-49231532:-|4.547726375381561|0.2927699401366612|3.96|483.0|62|2|sense	13.775330524044264	0.789990904165365	6				NaN	NaN	0	NaN	264	2215	2474
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2496	12.098	NaN	45760	30	0	13465	0.214	+			20274	KENPVKLK	8	83	478.3000486725167	NaN	0	478.3000183105469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KENPVKLK_	CCDC30|p.L74P|1|0.26|ENSG00000186409|chr1:42539276-42539276|T/C|missense_variant	133.8126618989323	1.7418937515398478	6				NaN	NaN	0	NaN	276	2218	2495
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2497	12.102	NaN	9224.9	30	0	1754.3	0.106				-1	QTWCCRQW	8	45	584.2442954257386	1166.4740379182772	2	584.2459716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_QTWC(Carbamidomethyl (C))CRQW_	ENST00000422000.5_1_12:498583-521038:+|nuORF;ENST00000540180.5_1_12:498538-521038:+|nuORF	26.79610172149135	0.7524337208463756	6				NaN	NaN	0	NaN	277	2218	2495
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2498	12.104	NaN	4468.7	30	0	563.02	0.106	+			3533	ASSRHGIQK	9	39	328.5175811062235	NaN	0	328.5175476074219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASSRHGIQK_	ENSG00000135899|ENST00000258381|SP110;ENST00000490880.5_1_2:231065532-231076254:-|nuORF;nc|ENSG00000135899|Q9HB58-2|SP110;nc|ENSG00000135899|Q9HB58-3|SP110;nc|ENSG00000135899|Q9HB58-7|SP110;nc|ENSG00000135899|Q9HB58|SP110	65.46538089061403	0.1260090208616529	6				NaN	NaN	0	NaN	278	2218	2495
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2499	12.106	NaN	5920.3	30	0	1339.6	0.106			+	-1	QACRGEKSR	9	66	546.2727046474431	1090.5308563616861	2	546.2749633789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_QAC(Carbamidomethyl (C))RGEKSR_	REV__ENSG00000122861|ENST00000372764|PLAU;REV__nc|ENSG00000122861|P00749-2|PLAU	39.252832667884924	0.4290233611298554	6				NaN	NaN	0	NaN	279	2218	2495
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2500	12.108	NaN	2571.4	30	0	804.86	0.106			+	49007	VVGPKLGK	8	33	399.26579618119604	NaN	0	399.26580810546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVGPKLGK_	REV__ENSG00000115414|ENST00000354785|FN1;REV__FN1|p.L1714*|1|0.2|ENSG00000115414|chr2:215380832-215380832|G/-|frameshift_variant;REV__FN1|p.S1791Rfs*9|1|0.07|ENSG00000115414|chr2:215378239-215378239|A/-|frameshift_variant;REV__nc|ENSG00000115414|P02751-1|FN1;REV__nc|ENSG00000115414|P02751-10|FN1;REV__nc|ENSG00000115414|P02751-11|FN1;REV__nc|ENSG00000115414|P02751-12|FN1;REV__nc|ENSG00000115414|P02751-13|FN1;REV__nc|ENSG00000115414|P02751-14|FN1;REV__nc|ENSG00000115414|P02751-17|FN1;REV__nc|ENSG00000115414|P02751-3|FN1;REV__nc|ENSG00000115414|P02751-4|FN1;REV__nc|ENSG00000115414|P02751-5|FN1;REV__nc|ENSG00000115414|P02751-6|FN1;REV__nc|ENSG00000115414|P02751-7|FN1;REV__nc|ENSG00000115414|P02751-8|FN1;REV__nc|ENSG00000115414|P02751-9|FN1	44.53106598305862	1.7418937515398478	6				NaN	NaN	0	NaN	280	2218	2495
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2501	12.109	NaN	1271.1	30	0	153.18	0.037			+	17847	IFNPVAEEFI	10	44	589.8077392578125	NaN	0	589.8077392578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IFNPVAEEFI_	REV__tr|U7T3G4|U7T3G4_FUSNUAminobenzoyl-glutamatetransporterOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00266PE=4SV=1	15.641811463095205	0.4201028297492154	6				NaN	NaN	0	NaN	281	2218	2495
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2502	12.11	NaN	2850.5	30	0	567.95	0.14			+	19864	KEELGSEVY	9	42	527.2612688609286	NaN	0	527.26123046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KEELGSEVY_	REV__tr|U7STE1|U7STE1_FUSNUDUF4304domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01378PE=4SV=1	29.14955571784316	0.3303970763161698	6				NaN	NaN	0	NaN	282	2218	2495
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2516	12.141	NaN	28336	30	0	4114.5	0.214			+	4521	ATKLLCQEL	9	91	509.78408790784374	1017.5536228824875	2	509.7857360839844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATKLLCQEL_	REV__ANKIB1|p.R617C|1|0.23|ENSG00000001629|chr7:92387984-92387984|C/T|missense_variant	71.87747018426188	0.13267044672804276	6				NaN	NaN	0	NaN	293	2221	2515
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2517	12.145	NaN	31937	30	0	4744.5	0.106	+			3475	ASSATQVHK	9	92	464.74580809061314	NaN	0	464.745849609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASSATQVHK_	ENST00000361272.8_2_8:17102747-17104366:-|nuORF	159.27591364854348	0.00998596805711162	6				NaN	NaN	0	NaN	294	2221	2515
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2518	12.147	NaN	3793.1	30	0	455.71	0.106			+	19694	KDRLKENK	8	62	515.8038940429688	NaN	0	515.8038940429688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KDRLKENK_	REV__ENSG00000144028|ENST00000323853|SNRNP200;REV__nc|ENSG00000144028|O75643-2|SNRNP200	82.30502934623384	1.7418937515398478	6				NaN	NaN	0	NaN	295	2221	2515
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2519	12.149	NaN	5021.6	30	0	603.36	0.106	+			7538	DGTQKVQNNI	10	67	558.7844484474401	1115.5543439616802	2	558.7467041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DGTQKVQNNI_	ENSG00000157315|ENST00000288025|TMED6	39.252832667884924	0.5560298534376815	6				NaN	NaN	0	NaN	296	2221	2515
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2520	12.151	NaN	1024.7	30	0	84.527	0.106			+	-1	MCTYMGPCMQ	10	31	590.7042846679688	NaN	0	590.7042846679688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_M(Oxidation (M))CTYMGPCMQ_	REV__ENST00000481254.1_1_9:35074849-35075035:-|nuORF	10.865556482863946	0.4201028297492154	6				NaN	NaN	0	NaN	297	2221	2515
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2521	12.152	NaN	2107.9	30	0	798.11	0.035			+	-1	FVYCCMGL	8	26	496.7039489746094	NaN	0	496.7039489746094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_FVYC(Carbamidomethyl (C))CMGL_	REV__ENSG00000167207|ENST00000647318|NOD2;REV__nc|ENSG00000167207|Q9HC29|NOD2	10.184766708764876	1.7418937515398478	6				NaN	NaN	0	NaN	298	2221	2515
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2522	12.153	NaN	2422.1	30	0	443.5	0.141	+			12045	FYRTASELL	9	54	550.2933959960938	NaN	0	550.2933959960938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FYRTASELL_	ENSG00000145700|ENST00000506364|ANKRD31;ENST00000504022.1_1_5:74434805-74464953:-|nuORF;nc|ENSG00000145700|Q8N7Z5|ANKRD31	40.77816245573522	0.2702456086868081	6				NaN	NaN	0	NaN	299	2221	2515
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2535	12.183	NaN	20318	30	0	6277	0.214			+	6727	CAKRTIQK	8	69	474.27843829201987	946.5423236508398	2	474.2793884277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CAKRTIQK_	REV__ENSG00000173120|ENST00000529006|KDM2A;REV__ENST00000524657.1_1_11:67020024-67022523:+|nuORF;REV__nc|ENSG00000173120|Q9Y2K7-2|KDM2A;REV__nc|ENSG00000173120|Q9Y2K7-4|KDM2A;REV__nc|ENSG00000173120|Q9Y2K7-5|KDM2A	104.74654710444128	0.24806011021879068	6				NaN	NaN	0	NaN	309	2224	2534
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2536	12.186	NaN	7060.8	30	0	2562	0.106	+			3415	ASQKALKEK	9	59	501.80072376961255	NaN	0	501.8006591796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASQKALKEK_	ENSG00000131143|ENST00000253452|COX4I1;ENST00000567266.5_1_16:85833348-85838718:+|nuORF;ENST00000569997.1_1_16:85838427-85838718:+|nuORF	85.86182877749512	0.05129763505578642	6				NaN	NaN	0	NaN	310	2224	2534
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2537	12.188	NaN	13794	30	0	4559.4	0.106				-1	 	0	76	334.8685389614857	1001.583787484657	3	334.8695068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	311	2224	2534
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2538	12.19	NaN	4775.9	30	0	924.21	0.106	+			16563	HFETVNNNA	9	57	523.2386561438922	1044.4627593545843	2	523.2406616210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HFETVNNNA_	tr|U7T6L2|U7T6L2_FUSNUEamAdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00284PE=4SV=1	35.61828744233558	0.47037581924408073	6				NaN	NaN	0	NaN	312	2224	2534
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2539	12.192	NaN	5793.6	30	0	552.85	0.106	+			13645	GMPKSYLPQ	9	72	510.762631657826	1019.510710382452	2	510.7640686035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GMPKSYLPQ_	ENSG00000134352|ENST00000381298|IL6ST;ENST00000503773.6_1_5:55236912-55256289:-|nuORF;nc|ENSG00000134352|P40189-3|IL6ST	76.7741389293348	0.11149722112137898	6				NaN	NaN	0	NaN	313	2224	2534
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2540	12.194	NaN	1818.3	30	0	360.04	0.106			+	19895	KEEVPVYL	8	38	488.76996581495865	975.5253786967173	2	488.7713317871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KEEVPVYL_	REV__ARHGEF10|p.E997Gfs*16|1|0.43|ENSG00000104728|chr8:1928644-1928644|A/-|frameshift_variant;REV__ARHGEF10|p.P976Rfs*8|1|0.14|ENSG00000104728|chr8:1928577-1928577|C/-|frameshift_variant;REV__ENSG00000104728|ENST00000349830|ARHGEF10;REV__nc|ENSG00000104728|O15013-4|ARHGEF10;REV__nc|ENSG00000104728|O15013-6|ARHGEF10;REV__nc|ENSG00000104728|O15013-7|ARHGEF10;REV__nc|ENSG00000104728|O15013|ARHGEF10	33.51558372728122	0.7005509609380386	6				NaN	NaN	0	NaN	314	2224	2534
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2541	12.195	NaN	1631.4	30	0	572.79	0.034	+			20849	KILCMFSK	8	34	485.26684440506085	968.5191358769217	2	485.2686767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KILCMFSK_	ENST00000557373.1_1_14:35344887-35344989:+|nuORF	40.5726180659479	0.6527593143185008	6				NaN	NaN	0	NaN	315	2224	2534
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2549	12.215	NaN	10048	30	0	2698.2	0.214			+	34088	RSPREQNR	8	63	521.7784811574636	1041.542409381727	2	521.7803344726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RSPREQNR_	REV__ENSG00000154227|ENST00000679737|CERS3	53.351449002276354	0.5676011784961348	6				NaN	NaN	0	NaN	320	2227	2548
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2550	12.219	NaN	10145	30	0	4902.9	0.106	+			34434	RTVGVSKKK	9	73	334.8854543184336	NaN	0	334.8853454589844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RTVGVSKKK_	ENSG00000231500|ENST00000439602|RPS18;ENST00000412454.1_1_17:14608395-14608521:-|nuORF	56.43379154798735	0.16452882468284893	6				NaN	NaN	0	NaN	321	2227	2548
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2551	12.221	NaN	1651.6	30	0	239.06	0.106	+			17829	IFEKDSKFYL	10	37	645.3422222633355	1288.669891593471	2	645.3440551757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IFEKDSKFYL_	ENSG00000087266|ENST00000503393|SH3BP2;ENST00000515737.5_1_4:2825262-2835558:+|nuORF;nc|ENSG00000087266|P78314-3|SH3BP2;nc|ENSG00000087266|P78314-4|SH3BP2	31.634271133179894	0.6214930414500597	6				NaN	NaN	0	NaN	322	2227	2548
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2552	12.223	NaN	1320.4	30	0	244.35	0.106	+			33433	RIKGSIQRMKQ	11	48	672.8996268414645	1343.784700749729	2	672.90087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RIKGSIQRMKQ_	ENSG00000150773|ENST00000280350|PIH1D2;nc|ENSG00000150773|Q8WWB5-2|PIH1D2;nc|ENSG00000150773|Q8WWB5-3|PIH1D2	26.063383197487333	0.7164075632144343	6				NaN	NaN	0	NaN	323	2227	2548
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2553	12.224	NaN	4893.3	30	0	1867	0.106				-1	 	0	49	468.23680025635554	934.4590475795111	2	468.23822021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	324	2227	2548
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2554	12.226	NaN	1212.5	30	0	508.95	0.035	+			9272	EHFPLTLE	8	31	493.25218112640323	984.4898093196065	2	493.2537536621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EHFPLTLE_	nc|ENSG00000282499|A0A075B6N4|TRBV25-1	19.359975847455235	0.7988239741663654	6				NaN	NaN	0	NaN	325	2227	2548
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2560	12.242	NaN	3883.6	30	0	751.87	0.215			+	31747	QPCLLHLLQ	9	64	532.799304483641	1063.5840560340819	2	532.8013305664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QPCLLHLLQ_	REV__ENST00000554976.5_1_14:90421413-90421572:+|nuORF	44.116797842482775	0.37197099687881774	6				NaN	NaN	0	NaN	328	2230	2559
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2561	12.246	NaN	2225.1	30	0	728.57	0.106			+	-1	QCPPNEWC	8	41	517.1972168600371	1032.379880786874	2	517.19873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_QCPPNEWC(Carbamidomethyl (C))_	REV__L1PA8_dup4178|chr8:94121319-94127043:-|4.057818296907117|0.2856926403965029|3.83|481.0|233|1|anti-sense	12.206847966760668	0.7875100812264838	6				NaN	NaN	0	NaN	329	2230	2559
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2562	12.248	NaN	3457.9	30	0	630.04	0.106			+	-1	QQVQASPSPQ	10	52	556.2725794997796	1110.530606066359	2	556.2743530273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))QQVQASPSPQ_	REV__nc|ENSG00000109339|P53779-2|MAPK10	44.639436926238396	0.506394993251866	6				NaN	NaN	0	NaN	330	2230	2559
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2563	12.25	NaN	1184	30	0	212.03	0.106				-1	 	0	36	427.7389099936513	853.4632670541026	2	427.740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	331	2230	2559
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2564	12.252	NaN	2630.6	30	0	407.5	0.106			+	44941	TVASFPWGK	9	50	496.76495360161294	991.5153542700259	2	496.76568603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TVASFPWGK_	REV__ENSG00000136449|ENST00000323776|MYCBPAP;REV__ENST00000470609.5_1_17:48585906-48599496:+|nuORF;REV__nc|ENSG00000136449|Q8TBZ2|MYCBPAP	68.78682469695295	0.14603441672067394	6				NaN	NaN	0	NaN	332	2230	2559
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2565	12.253	NaN	1880.4	30	0	449.55	0.106				-1	MIRLAGDGV	9	42	487.2606816613132	972.5068103894264	2	487.2621154785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))MIRLAGDGV_	ENST00000550153.1_1_12:52641566-52642541:+|nuORF	27.882242232435846	0.5426732730940306	6				NaN	NaN	0	NaN	333	2230	2559
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2566	12.255	NaN	1231.7	30	0	431.25	0.038			+	-1	AWSLRVTKMT	10	26	604.8256607465828	1207.6367685599655	2	604.8277587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_AWSLRVTKM(Oxidation (M))T_	REV__ERBB4|p.D41Lfs*26|1|0.32|ENSG00000178568|chr2:212124865-212124866|-/AG|frameshift_variant	23.04248740728303	0.69165701907106	6				NaN	NaN	0	NaN	334	2230	2559
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2573	12.273	NaN	6575.1	30	0	1349.6	0.214	+			31440	QKQFDQDH	8	65	523.2386561438922	1044.4627593545843	2	523.2403564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QKQFDQDH_	ENSG00000100852|ENST00000345122|ARHGAP5;ENST00000407916.2_1_7:55004982-55005627:+|nuORF;nc|ENSG00000100852|Q13017-2|ARHGAP5;nc|ENSG00000100852|Q13017-3|ARHGAP5;nc|ENSG00000100852|Q13017-4|ARHGAP5	40.5726180659479	0.6527593143185008	6				NaN	NaN	0	NaN	338	2233	2572
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2574	12.277	NaN	5597.1	30	0	2704.6	0.106			+	-1	LGCLRYSGW	9	34	371.18404909155043	1110.5303178748513	3	371.1854553222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LGC(Carbamidomethyl (C))LRYSGW_	REV__ENST00000565547.1_1_15:89630488-89631079:-|nuORF;REV__ENST00000570120.1_1_15:89630896-89631097:-|nuORF	29.14955571784316	0.5308295550522326	6				NaN	NaN	0	NaN	339	2233	2572
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2575	12.279	NaN	4272.6	30	0	2053.6	0.106				-1	TSASCPSHL	9	45	480.21760956271476	NaN	0	480.21759033203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_TSASC(Carbamidomethyl (C))PSHL_	COL1A1|p.G1181Afs*58|1|0.37|ENSG00000108821|chr17:50186914-50186914|G/-|frameshift_variant	30.503639358989545	0.3235605894931338	6				NaN	NaN	0	NaN	340	2233	2572
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2576	12.28	NaN	3476	30	0	794.2	0.106			+	27150	MCASRPRAG	9	54	482.72627403893966	963.4379951446793	2	482.7276611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_M(Oxidation (M))CASRPRAG_	REV__ENST00000289746.2_1_16:89256660-89256822:+|nuORF	45.9519527083369	0.35044536499095585	6				NaN	NaN	0	NaN	341	2233	2572
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2577	12.282	NaN	3712.5	30	0	576.13	0.106	+			7844	DQPVEDPDPE	10	47	570.7387357064223	1139.4629184796445	2	570.7406616210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DQPVEDPDPE_	ENSG00000069329|ENST00000299138|VPS35;ENST00000568784.6_1_16:46694386-46722246:-|nuORF	19.996771675451527	0.7148376616046445	6				NaN	NaN	0	NaN	342	2233	2572
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2578	12.284	NaN	2752.9	30	0	971.5	0.106			+	30196	PSPKKVTAAGA	11	38	513.8020963962645	1025.5896398593288	2	513.8037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PSPKKVTAAGA_	REV__ENSG00000104885|ENST00000398665|DOT1L;REV__nc|ENSG00000104885|Q8TEK3-1|DOT1L	20.94693142431847	0.7700749696703488	6				NaN	NaN	0	NaN	343	2233	2572
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2579	12.286	NaN	398.36	30	0	100.11	0.03				-1	 	0	25	323.71495814442403	645.4153633556481	2	323.7157287597656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	344	2233	2572
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2584	12.3	NaN	4633	30	0	904.59	0.214				-1	 	0	57	493.7653873935389	985.5162218538778	2	493.7665100097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	346	2236	2583
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2585	12.304	NaN	3397.6	30	0	1173.6	0.106				-1	 	0	50	465.2728850607982	928.5312171883965	2	465.2743225097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	347	2236	2583
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2586	12.306	NaN	1081.1	30	0	349.59	0.106				-1	 	0	28	461.7631041722293	921.5116554112586	2	461.7642517089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	348	2236	2583
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2587	12.308	NaN	1484	30	0	659.84	0.106			+	-1	MINNRFSN	8	20	506.2365905205722	1010.4586281079444	2	506.2374267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_M(Oxidation (M))INNRFSN_	REV__tr|U7SH74|U7SH74_FUSNUCRISPRsystemCmsproteinCsm5OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02351PE=3SV=1	11.511019455917149	0.786409509643324	6				NaN	NaN	0	NaN	349	2236	2583
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2588	12.31	NaN	1674.7	30	0	278.64	0.106				-1	GPRCSKTEP	9	35	508.74591064453125	NaN	0	508.74591064453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))GPRCSKTEP_	ENST00000533780.1_1_1:161599917-161599965:-|nuORF	25.57405402267927	0.3484490411150625	6				NaN	NaN	0	NaN	350	2236	2583
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2589	12.311	NaN	1930	30	0	304.03	0.106				-1	 	0	46	342.1844573872775	1023.5315427620326	3	342.185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	351	2236	2583
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2590	12.313	NaN	1475	30	0	238.18	0.037				-1	LICFGDDYC	9	21	581.7296538127612	1161.4447546923222	2	581.7321166992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C)	_LIC(Carbamidomethyl (C))FGDDYC(Carbamidomethyl (C))_	ENST00000315758.9_1_7:75695761-75695887:+|nuORF	12.959181472943097	0.6112419832031292	6				NaN	NaN	0	NaN	352	2236	2583
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2597	12.33	NaN	3631.6	30	0	499.72	0.214	+			23171	KWALVQHQQ	9	45	569.3130694510611	1136.611585968922	2	569.3152465820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KWALVQHQQ_	ZNF599|p.R216Q|1|0.27|ENSG00000153896|chr19:34760154-34760154|C/T|missense_variant	52.936696900407355	0.27249468807391813	6				NaN	NaN	0	NaN	356	2239	2596
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2598	12.333	NaN	5347.6	30	0	1940.4	0.106			+	-1	SVLESMIKSK	10	42	379.87791038025244	1136.6119017409574	3	379.8790283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_SVLESM(Oxidation (M))IKSK_	REV__ENSG00000138758|ENST00000264893|SEPTIN11;REV__ENST00000506047.1_1_4:77936059-77941836:+|nuORF;REV__nc|ENSG00000138758|Q9NVA2-2|SEPTIN11	29.170058357718403	0.6416167986984785	6				NaN	NaN	0	NaN	357	2239	2596
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2599	12.335	NaN	2601.1	30	0	504.49	0.106			+	32597	QYIKEKTQ	8	45	519.2848634999098	1036.5551740666194	2	519.2864990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QYIKEKTQ_	REV__ENSG00000124215|ENST00000348616|CDH26;REV__nc|ENSG00000124215|Q8IXH8-1|CDH26	39.252832667884924	0.6609488554722044	6				NaN	NaN	0	NaN	358	2239	2596
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2600	12.337	NaN	4124.6	30	0	1120.8	0.106	+			30483	QAEVLDGYLG	10	49	532.7673253209578	1063.5200977087154	2	532.769775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QAEVLDGYLG_	ENSG00000075568|ENST00000186436|TMEM131;TMEM131|p.G555Wfs*10|1|0.32|ENSG00000075568|chr2:97812704-97812705|-/A|frameshift_variant;TMEM131|p.L1469Tfs*5|1|0.43|ENSG00000075568|chr2:97772340-97772341|-/T|frameshift_variant;TMEM131|p.L538Ffs*27|1|0.09|ENSG00000075568|chr2:97813974-97813975|-/A|frameshift_variant;TMEM131|p.N815Ifs*2|1|0.27|ENSG00000075568|chr2:97802749-97802749|T/-|frameshift_variant;TMEM131|p.N815Kfs*9|1|0.31|ENSG00000075568|chr2:97802748-97802749|-/T|frameshift_variant	26.69291269510374	0.6618461711292317	6				NaN	NaN	0	NaN	359	2239	2596
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2601	12.339	NaN	1175.7	30	0	424.28	0.033	+			398	AASPAHPAK	9	30	425.232330583072	NaN	0	425.2324523925781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AASPAHPAK_	ENSG00000183495|ENST00000389561|EP400;EP400|p.L2071Rfs*37|1|0.23|ENSG00000183495|chr12:132043308-132043326|TCAAGAGTATTGAGTATCT/-|frameshift_variant;EP400|p.P2793Rfs*46|1|0.3|ENSG00000183495|chr12:132064707-132064707|C/-|frameshift_variant;EP400|p.Q1630Sfs*11|1|0.4|ENSG00000183495|chr12:132025670-132025670|C/-|frameshift_variant;nc|ENSG00000183495|Q96L91-3|EP400;nc|ENSG00000183495|Q96L91-5|EP400;nc|ENSG00000183495|Q96L91|EP400	42.396135135203025	0.2590952873412954	6				NaN	NaN	0	NaN	360	2239	2596
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2607	12.353	NaN	50145	30	0	13094	0.214				-1	 	0	84	474.2964340615019	946.5783151898038	2	474.29766845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	363	2242	2606
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2608	12.357	NaN	6069.7	30	0	1270.7	0.106	+			4154	ATETNLPLL	9	39	486.27519034459914	970.5358277559983	2	486.2762756347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATETNLPLL_	ENSG00000119927|ENST00000348367|GPAM	30.503639358989545	0.5181749237905803	6				NaN	NaN	0	NaN	364	2242	2606
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2609	12.359	NaN	7485.6	30	0	2403.7	0.106				-1	 	0	50	346.56470069230124	1036.6722726771038	3	346.5657653808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	365	2242	2606
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2610	12.361	NaN	5413.2	30	0	1063.2	0.106	+			14646	GTHASEHAVNK	11	69	575.7818667787162	1149.5491806242323	2	575.7838134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTHASEHAVNK_	ENSG00000166595|ENST00000422424|CIAO2B;ENST00000562362.5_1_16:66966108-66968009:-|nuORF	104.01359247289065	0.05238957925696483	6				NaN	NaN	0	NaN	366	2242	2606
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2611	12.363	NaN	3220.8	30	0	1025.4	0.106				-1	 	0	50	459.29118992256514	916.5678269119303	2	459.2923278808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	367	2242	2606
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2612	12.364	NaN	5827.4	30	0	1597.3	0.106			+	8098	DYDQYKEK	8	52	544.7480532956725	1087.481553658145	2	544.7503662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DYDQYKEK_	REV__tr|U7T5X5|U7T5X5_FUSNUMobA/MobLproteindomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00007PE=3SV=1	18.262085536374414	0.7970874732053207	6				NaN	NaN	0	NaN	368	2242	2606
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2613	12.366	NaN	4618.1	30	0	1239.4	0.036	+			30684	QCISKNWVC	9	40	540.7525579424138	1079.4905629516275	2	540.7545776367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QCISKNWVC_	ENSG00000081479|ENST00000649046|LRP2	17.364965105453717	0.6112419832031293	6				NaN	NaN	0	NaN	369	2242	2606
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2620	12.383	NaN	13198	30	0	3298.6	0.214				-1	 	0	80	577.2999913977103	1152.5854298622205	2	577.3018188476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	373	2245	2619
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2621	12.387	NaN	3624.4	30	0	429.38	0.106			+	22749	KVDKSDTPS	9	65	488.7530307886875	NaN	0	488.7528991699219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVDKSDTPS_	REV__ENSG00000117501|ENST00000367759|MROH9	44.377184641726394	0.24544280798894275	6				NaN	NaN	0	NaN	374	2245	2619
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2622	12.388	NaN	3059.3	30	0	956.7	0.106	+			27863	MTHHLTKQ	8	44	506.2553557425719	NaN	0	506.25555419921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))THHLTKQ_	ENST00000599501.6_3_2:98292334-98305447:+|nuORF	40.77816245573522	1.7418937515398478	6				NaN	NaN	0	NaN	375	2245	2619
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2623	12.39	NaN	1916.2	30	0	362.73	0.106			+	-1	GQPCPCTAMMR	11	28	626.2608389299847	NaN	0	626.2617797851562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_GQPCPC(Carbamidomethyl (C))TAMMR_	REV__IRS1|p.H598Tfs*38|3|0.31|ENSG00000169047|chr2:226796948-226796948|C/-|frameshift_variant	12.206681093483082	0.456735970842152	6				NaN	NaN	0	NaN	376	2245	2619
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2624	12.392	NaN	2313.1	30	0	435.47	0.106	+			8108	DYKVAYVQ	8	41	493.25218112640323	984.4898093196065	2	493.2719421386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DYKVAYVQ_	ENSG00000214026|ENST00000397298|MRPL23;ENST00000462288.5_1_11:1968785-1977647:+|nuORF;ENST00000466346.1_1_11:1972144-1974292:+|nuORF	30.503639358989545	0.7238069182250283	6				NaN	NaN	0	NaN	377	2245	2619
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2625	12.394	NaN	2714.1	30	0	766.71	0.036			+	27659	MPSKMGMADH	10	30	552.7335687412752	1103.4525845493504	2	552.7350463867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MPSKMGMADH_	REV__ENST00000421655.1_1_9:108522415-108523033:+|nuORF	15.641811463095205	0.7369665665077569	6				NaN	NaN	0	NaN	378	2245	2619
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2637	12.42	NaN	8669.6	30	0	2374.6	0.214			+	31650	QMVKAVFQK	9	67	539.8073238097803	1077.6000946863605	2	539.8090209960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QMVKAVFQK_	REV__ENSG00000197157|ENST00000354725|SND1;REV__GAS2L3-SND1|1|fusion;REV__SND1|p.A514Qfs*156|1|0.37|ENSG00000197157|chr7:127929195-127929195|A/-|frameshift_variant	51.33545320467046	0.2872990594074956	6				NaN	NaN	0	NaN	387	2248	2636
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2638	12.424	NaN	4756.7	30	0	481.73	0.106				-1	 	0	59	347.8758951311498	1040.6058559936494	3	347.8768615722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	388	2248	2636
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2639	12.426	NaN	6761.9	30	0	2562.7	0.106			+	-1	YALLCRLVA	9	34	360.2070472689961	1077.5993124071883	3	360.2082214355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_YALLC(Carbamidomethyl (C))RLVA_	REV__ENSG00000170525|ENST00000379775|PFKFB3;REV__ENST00000487989.1_1_10:6264793-6268376:+|nuORF;REV__nc|ENSG00000170525|Q16875-2|PFKFB3;REV__nc|ENSG00000170525|Q16875-3|PFKFB3;REV__nc|ENSG00000170525|Q16875-4|PFKFB3	19.996771675451527	0.6112419832031292	6				NaN	NaN	0	NaN	389	2248	2636
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2640	12.427	NaN	2812.7	30	0	898.57	0.106				-1	 	0	51	443.7617377445162	885.5089225558324	2	443.76287841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	390	2248	2636
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2641	12.429	NaN	1590.2	30	0	353.2	0.106	+			2481	APPGVTQK	8	37	399.2292417200814	NaN	0	399.22930908203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_APPGVTQK_	ENSG00000071282|ENST00000157600|LMCD1;ENST00000470776.1_1_3:8543537-8579195:+|nuORF;nc|ENSG00000071282|Q9NZU5-2|LMCD1	63.30626980617807	1.7418937515398478	6				NaN	NaN	0	NaN	391	2248	2636
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2642	12.431	NaN	2091.8	30	0	283.26	0.106			+	-1	ETKCPYCP	8	30	527.7222795760517	1053.4300062189034	2	527.2241821289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Carbamidomethyl (C)	_ETKC(Carbamidomethyl (C))PYC(Carbamidomethyl (C))P_	REV__ENST00000479747.1_1_9:130678362-130679146:-|nuORF	19.359975847455235	0.7988239741663654	6				NaN	NaN	0	NaN	392	2248	2636
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2643	12.433	NaN	4043.3	30	0	935.04	0.035				-1	LGSEEPLCP	9	60	501.2327052252706	1000.4508575173412	2	501.2340393066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_LGSEEPLC(Carbamidomethyl (C))P_	SVA_D_dup628|chr7:140430960-140432406:+|1.004965212380795|0.4952733165024275|1.02|477.0|6|1|sense	33.51558372728122	0.4900267029546261	6				NaN	NaN	0	NaN	393	2248	2636
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2650	12.451	NaN	5343.6	30	0	725.59	0.214			+	31067	QFAFRQAL	8	62	490.77046323772527	979.5263735422506	2	490.7720031738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QFAFRQAL_	REV__ENSG00000196712|ENST00000358273|NF1;REV__ENST00000579081.5_2_17:29626598-29701170:+|nuORF;REV__nc|ENSG00000196712|P21359-2|NF1;REV__nc|ENSG00000196712|P21359-6|NF1;REV__NF1|p.F2429Qfs*7|1|0.17|ENSG00000196712|chr17:31349214-31349215|-/CAAGTAAGAATTAATT|frameshift_variant	35.200714571348534	0.6875396545722289	6				NaN	NaN	0	NaN	397	2251	2649
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2651	12.454	NaN	10794	30	0	2321.8	0.106				-1	 	0	75	592.809674734863	1183.604796536526	2	592.8118896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	398	2251	2649
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2652	12.456	NaN	1217.5	30	0	709.14	0.106	+			29800	PKAVSKQAA	9	24	450.26783917581116	898.5211254184223	2	450.2689514160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PKAVSKQAA_	ENSG00000277399|ENST00000616987|GPR179;GPR179|p.K1289Rfs*12|1|0.29|ENSG00000277399|chr17:38329703-38329703|T/-|frameshift_variant;GPR179|p.L1200Afs*38|1|0.36|ENSG00000277399|chr17:38329971-38329972|-/C|frameshift_variant;GPR179|p.R1290Efs*59|1|0.25|ENSG00000277399|chr17:38329702-38329703|-/T|frameshift_variant;nc|ENSG00000277399|Q6PRD1|GPR179	10.865556482863946	0.6112419832031292	6				NaN	NaN	0	NaN	399	2251	2649
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2653	12.458	NaN	4334.7	30	0	694.21	0.106	+			20106	KEKKKSAAL	9	58	501.8179833874969	1001.6214138417938	2	501.8189392089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEKKKSAAL_	ENSG00000163219|ENST00000409202|ARHGAP25;nc|ENSG00000163219|P42331-3|ARHGAP25;nc|ENSG00000163219|P42331-5|ARHGAP25;nc|ENSG00000163219|P42331-6|ARHGAP25;nc|ENSG00000163219|P42331|ARHGAP25	87.69643885390035	0.07135982304947239	6				NaN	NaN	0	NaN	400	2251	2649
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2654	12.46	NaN	7639.7	30	0	1302	0.106				-1	MPESEMEVM	9	51	557.7094690490156	1113.4043851648312	2	557.7117919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Oxidation (M)	_MPESEM(Oxidation (M))EVM(Oxidation (M))_	ENSG00000242498|ENST00000357484|ARPIN;nc|ENSG00000242498|Q7Z6K5-2|ARPIN	18.324413293986947	0.6112419832031293	6				NaN	NaN	0	NaN	401	2251	2649
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2655	12.462	NaN	4356.7	30	0	920.07	0.106	+			6159	AVQGGKIKRK	10	60	542.8495998983459	1083.6846468634917	2	542.791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AVQGGKIKRK_	ENSG00000158528|ENST00000433360|PPP1R9A;nc|ENSG00000158528|Q9ULJ8-2|PPP1R9A;nc|ENSG00000158528|Q9ULJ8-4|PPP1R9A;nc|ENSG00000158528|Q9ULJ8-5|PPP1R9A	39.252832667884924	0.5560298534376815	6				NaN	NaN	0	NaN	402	2251	2649
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2656	12.464	NaN	3869.3	30	0	311.6	0.037	+			7848	DQSGNYSQEC	10	45	565.7069867167053	1129.3994205002105	2	565.7086791992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DQSGNYSQEC_	ENSG00000103522|ENST00000337929|IL21R;IL21R|p.G360Afs*20|1|0.12|ENSG00000103522|chr16:27448740-27448740|G/-|frameshift_variant;IL21R|p.P123Lfs*4|1|0.23|ENSG00000103522|chr16:27442973-27442973|C/-|frameshift_variant	14.137123925751023	0.7446123510383054	6				NaN	NaN	0	NaN	403	2251	2649
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2667	12.487	NaN	8829.2	30	0	3628.8	0.214			+	9971	ERGGRGKRK	9	62	348.5439915725964	1042.6101453179892	3	348.5450134277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ERGGRGKRK_	REV__ENSG00000248905|ENST00000616417|FMN1;REV__nc|ENSG00000248905|Q68DA7-2|FMN1	63.53385203322761	0.18415635464017938	6				NaN	NaN	0	NaN	411	2254	2666
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2668	12.491	NaN	21962	30	0	9140.7	0.106			+	8760	EEGERLRK	8	85	339.5211926478516	1015.5417485437548	3	339.52215576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EEGERLRK_	REV__ENST00000397463.2_1_2:133402612-133403014:-|nuORF	31.954861631926434	0.7126016770032289	6				NaN	NaN	0	NaN	412	2254	2666
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2669	12.493	NaN	8396.9	30	0	2084	0.106			+	19966	KEGTHNRVHE	10	74	603.8014526367188	NaN	0	603.8014526367188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEGTHNRVHE_	REV__ENSG00000130803|ENST00000247956|ZNF317;REV__ENST00000590152.1_1_19:9267931-9272106:+|nuORF;REV__ENST00000591278.5_1_19:9268612-9272106:+|nuORF;REV__nc|ENSG00000130803|Q96PQ6-2|ZNF317;REV__nc|ENSG00000130803|Q96PQ6-3|ZNF317;REV__nc|ENSG00000130803|Q96PQ6-4|ZNF317;REV__ZNF317|p.L487Pfs*6|1|0.3|ENSG00000130803|chr19:9161101-9161104|TATT/-|frameshift_variant	64.20726635412375	0.1999210135493042	6				NaN	NaN	0	NaN	413	2254	2666
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2670	12.495	NaN	8365	30	0	1560.4	0.106				-1	PCCLLSAGSM	10	46	527.7222795760517	1053.4300062189034	2	527.724853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_PC(Carbamidomethyl (C))CLLSAGSM(Oxidation (M))_	ENST00000261778.1_1_16:69117615-69117759:+|nuORF	17.364965105453717	0.7282106878714807	6				NaN	NaN	0	NaN	414	2254	2666
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2671	12.497	NaN	6733.2	30	0	1553.8	0.106				-1	QQLNCESCD	9	40	548.7040003204635	1095.3934477077269	2	548.7056884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_QQLNC(Carbamidomethyl (C))ESCD_	ENSG00000164188|ENST00000296604|RANBP3L;nc|ENSG00000164188|Q86VV4-3|RANBP3L	20.94693142431847	0.6074874384046576	6				NaN	NaN	0	NaN	415	2254	2666
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2672	12.498	NaN	9636	30	0	1342.8	0.106			+	-1	ACIGSCWEGS	10	62	535.2056146973754	1068.3966764615507	2	535.2073364257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_ACIGSC(Carbamidomethyl (C))WEGS_	REV__ENST00000469485.5_1_X:18915540-18915612:-|nuORF	27.882242232435846	0.6521336255503853	6				NaN	NaN	0	NaN	416	2254	2666
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2673	12.5	NaN	5345.6	30	0	1604.6	0.036			+	-1	AGDMFEFVM	9	49	531.7194376168593	1061.4243223005185	2	531.7218017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_AGDMFEFVM(Oxidation (M))_	REV__CASK|p.N757Tfs*40|1|0.18|ENSG00000147044|chrX:41534753-41534753|T/-|frameshift_variant;REV__ENSG00000147044|ENST00000378163|CASK;REV__ENST00000468986.6_1_X:41602925-41782241:-|nuORF;REV__nc|ENSG00000147044|O14936-2|CASK;REV__nc|ENSG00000147044|O14936-3|CASK;REV__nc|ENSG00000147044|O14936-4|CASK;REV__nc|ENSG00000147044|O14936-6|CASK	21.9598887501803	0.5980208138527809	6				NaN	NaN	0	NaN	417	2254	2666
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2690	12.535	NaN	39575	30	0	22086	0.208			+	-1	IGVCVFRAK	9	45	350.5358248985725	1048.5856452959176	3	350.5368957519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_IGVC(Carbamidomethyl (C))VFRAK_	REV__CYSLTR1|p.K219Nfs*3|1|0.33|ENSG00000173198|chrX:78273090-78273090|T/-|frameshift_variant;REV__CYSLTR1|p.N224Ifs*9|1|0.59|ENSG00000173198|chrX:78273076-78273076|T/-|frameshift_variant;REV__ENSG00000173198|ENST00000373304|CYSLTR1	26.69291269510374	0.5537881896960711	6				NaN	NaN	0	NaN	431	2257	2689
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2691	12.539	NaN	24518	30	0	7164.6	0.106			+	18094	IKPLCNPHK	9	71	525.3002513200864	1048.5859497069728	2	525.3020629882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IKPLCNPHK_	REV__ENSG00000011405|ENST00000691414|PIK3C2A	30.503639358989545	0.5181749237905803	6				NaN	NaN	0	NaN	432	2257	2689
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2692	12.541	NaN	12267	30	0	2644.5	0.106	+			21972	KSEAASVKK	9	71	474.27843829201987	946.5423236508398	2	474.279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KSEAASVKK_	nc|ENSG00000171174|Q9H477-2|RBKS	93.19546047674547	0.05585629608842056	6				NaN	NaN	0	NaN	433	2257	2689
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2693	12.543	NaN	5656.8	30	0	1103.3	0.106	+			29537	PEGRFHFAI	9	59	537.2798629410519	1072.5451729489037	2	537.2815551757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PEGRFHFAI_	ENSG00000178814|ENST00000618853|OPLAH;OPLAH|p.H788Tfs*31|1|0.33|ENSG00000178814|chr8:144055076-144055076|G/-|frameshift_variant;OPLAH|p.H870Tfs*28|1|0.64|ENSG00000178814|chr8:144054639-144054639|G/-|frameshift_variant	31.954861631926434	0.5046124803899898	6				NaN	NaN	0	NaN	434	2257	2689
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2694	12.545	NaN	4020.9	30	0	2217.5	0.106	+			8723	EEEIDDIGYV	10	21	591.2631225003896	1180.5116920675791	2	591.2651977539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EEEIDDIGYV_	MIEF2|p.A442V|1|0.26|ENSG00000177427|chr17:18264724-18264724|C/T|missense_variant	17.364965105453717	0.7282106878714807	6				NaN	NaN	0	NaN	435	2257	2689
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2695	12.546	NaN	5844	30	0	1354.3	0.036	+			25421	LPLQRRCAD	9	59	536.2905883789062	NaN	0	536.2905883789062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LPLQRRCAD_	ENST00000416860.2_2_1:2487365-2487509:-|nuORF	25.57405402267927	0.3484490411150625	6				NaN	NaN	0	NaN	436	2257	2689
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2696	12.547	NaN	4358.8	30	0	544.79	0.139			+	13390	GLDMAPLLQ	9	60	479.2577576801471	956.5009624270942	2	479.25897216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GLDMAPLLQ_	REV__ENST00000566733.2_1_6:3911567-3911663:-|nuORF	56.72105179125745	0.24094814563026265	6				NaN	NaN	0	NaN	437	2257	2689
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2709	12.576	NaN	9216.8	30	0	1476.6	0.215				-1	 	0	66	521.7784811574636	1041.542409381727	2	521.780517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	447	2260	2708
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2710	12.58	NaN	8541	30	0	3382.6	0.106	+			40810	SVDYGKKSK	9	61	506.27592046015224	1010.5372879871045	2	506.2774353027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVDYGKKSK_	ENSG00000075886|ENST00000321253|TUBA3D;ENSG00000123416|ENST00000336023|TUBA1B;ENSG00000127824|ENST00000248437|TUBA4A;ENSG00000167552|ENST00000301071|TUBA1A;ENSG00000167553|ENST00000301072|TUBA1C;ENSG00000198033|ENST00000400113|TUBA3C;ENST00000442739.1_1_22:21363397-21363730:-|nuORF;nc|ENSG00000127824|P68366-2|TUBA4A;nc|ENSG00000167552|Q71U36-2|TUBA1A;nc|ENSG00000198033|P0DPH7-2|TUBA3C;TUBA3C|p.T361Rfs*18|1|0.17|ENSG00000198033|chr13:19174136-19174136|G/-|frameshift_variant;TUBA3D|p.G366Efs*13|1|0.17|ENSG00000075886|chr2:131482588-131482588|G/-|frameshift_variant;TUBA3D|p.V328Pfs*54|1|0.45|ENSG00000075886|chr2:131480665-131480666|-/CCCAAAGA|frameshift_variant;TUBA4A|p.V182Gfs*32|1|0.04|ENSG00000127824|chr2:219251156-219251157|-/TACACCA|frameshift_variant	98.58198989935565	0.04066992115528678	6				NaN	NaN	0	NaN	448	2260	2708
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2711	12.582	NaN	17294	30	0	6567	0.106	+			27449	MLLEFKAK	8	76	511.2915987274185	1020.568644521637	2	511.29315185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))MLLEFKAK_	tr|U7T498|U7T498_FUSNUATPaseAAA-typecoredomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00307PE=4SV=1	113.41158876095287	0.24327961457765637	6				NaN	NaN	0	NaN	449	2260	2708
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2712	12.584	NaN	4264	30	0	880.01	0.106	+			1541	AGCRFDKIKA	10	63	583.3126746230575	NaN	0	583.3126831054688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_AGC(Carbamidomethyl (C))RFDKIKA_	ENST00000354910.9_1_3:134201706-134204867:-|nuORF	72.87924865735499	0.13450315462291293	6				NaN	NaN	0	NaN	450	2260	2708
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2713	12.585	NaN	4543.6	30	0	749.99	0.106			+	32107	QSHLFQSH	8	62	492.2399123530538	NaN	0	492.2399597167969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QSHLFQSH_	REV__TMEM88|p.R73H|1|0.19|ENSG00000167874|chr17:7855452-7855452|G/A|missense_variant	66.42927471994793	1.7418937515398478	6				NaN	NaN	0	NaN	451	2260	2708
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2714	12.587	NaN	3425.1	30	0	861.64	0.106			+	21843	KRHDVAEI	8	60	484.2696533203125	NaN	0	484.2696533203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KRHDVAEI_	REV__ENST00000445654.2_1_11:70417416-70506001:-|nuORF	76.84663266511073	1.7418937515398478	6				NaN	NaN	0	NaN	452	2260	2708
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2715	12.589	NaN	3214.1	30	0	632.45	0.036			+	21659	KPYKKMHK	8	58	530.3101029567946	1058.605652980389	2	530.3118896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KPYKKMHK_	REV__CCDC66|p.V732*|1|0.25|ENSG00000180376|chr3:56617454-56617454|A/-|frameshift_variant;REV__ENSG00000180376|ENST00000394672|CCDC66;REV__ENST00000476142.1_1_3:56651192-56651654:+|nuORF;REV__nc|ENSG00000180376|A2RUB6-3|CCDC66	52.29916861842294	0.578018602984656	6				NaN	NaN	0	NaN	453	2260	2708
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2729	12.619	NaN	5280.5	30	0	1504	0.214	+			22162	KSSARVVEK	9	62	502.2979431152344	NaN	0	502.2979431152344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSSARVVEK_	ENST00000426367.1_1_X:123093242-123095163:-|nuORF	63.53385203322761	0.134247007536971	6				NaN	NaN	0	NaN	464	2263	2728
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2730	12.622	NaN	12670	30	0	4904.6	0.106				-1	KTSTIAML	8	45	440.7441748309972	879.4737967287945	2	440.74530029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_KTSTIAM(Oxidation (M))L_	ENST00000304425.3_1_9:21477017-21559634:-|nuORF	31.954861631926434	0.7126016770032289	6				NaN	NaN	0	NaN	465	2263	2728
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2731	12.624	NaN	2184.1	30	0	317.85	0.106	+			44840	TTTFLTGII	9	48	483.7769470214844	NaN	0	483.7769470214844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TTTFLTGII_	ENSG00000112053|ENST00000490799|SLC26A8;ENST00000486155.1_1_6:35928714-35992326:-|nuORF;nc|ENSG00000112053|Q96RN1-2|SLC26A8;nc|ENSG00000112053|Q96RN1-4|SLC26A8;SLC26A8|p.F647Lfs*4|1|0.31|ENSG00000112053|chr6:35955443-35955443|A/-|frameshift_variant;SLC26A8|p.N595Tfs*4|1|0.04|ENSG00000112053|chr6:35959539-35959540|-/G|frameshift_variant;SLC26A8|p.N842Mfs*2|1|0.8|ENSG00000112053|chr6:35944288-35944288|T/-|frameshift_variant	53.351449002276354	0.18359631779194618	6				NaN	NaN	0	NaN	466	2263	2728
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2732	12.626	NaN	4575.6	30	0	2414.4	0.106	+			34435	RTVGVSKKK	9	50	334.8854543184336	NaN	0	334.8855285644531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RTVGVSKKK_	ENSG00000231500|ENST00000439602|RPS18;ENST00000412454.1_1_17:14608395-14608521:-|nuORF	51.19269402634007	0.19847346126499396	6				NaN	NaN	0	NaN	467	2263	2728
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2733	12.628	NaN	2196	30	0	524.64	0.106	+			22150	KSRCTELEK	9	55	365.1939392089844	NaN	0	365.1939392089844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KSRCTELEK_	ENSG00000135968|ENST00000309863|GCC2;GCC2|p.E105Dfs*5|1|0.08|ENSG00000135968|chr2:108469077-108469078|-/TTTATTT|frameshift_variant;GCC2|p.L712Cfs*16|1|0.49|ENSG00000135968|chr2:108471458-108471458|T/-|frameshift_variant;GCC2|p.N174Ifs*10|1|0.04|ENSG00000135968|chr2:108469849-108469850|-/TTTTCAATTTCTTTCACAT|frameshift_variant	47.95952297671804	0.22075498469600283	6				NaN	NaN	0	NaN	468	2263	2728
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2734	12.629	NaN	4459	30	0	569.25	0.036	+			16299	HEHGQLHSM	9	62	546.2366379783073	1090.4587230234144	2	546.2389526367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_HEHGQLHSM(Oxidation (M))_	ENSG00000196504|ENST00000545856|PRPF40A;nc|ENSG00000196504|O75400-2|PRPF40A;nc|ENSG00000196504|O75400-3|PRPF40A;nc|ENSG00000196504|O75400|PRPF40A	56.43379154798735	0.2433427591689151	6				NaN	NaN	0	NaN	469	2263	2728
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2735	12.63	NaN	1958	30	0	608.58	0.139	+			19312	KAGPIGILF	9	35	458.2847900390625	NaN	0	458.2847900390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KAGPIGILF_	ENSG00000007062|ENST00000447510|PROM1;nc|ENSG00000007062|O43490-2|PROM1;nc|ENSG00000007062|O43490-3|PROM1;nc|ENSG00000007062|O43490-4|PROM1;nc|ENSG00000007062|O43490-5|PROM1;nc|ENSG00000007062|O43490-6|PROM1;nc|ENSG00000007062|O43490-7|PROM1	26.79610172149135	0.34227917631780574	6				NaN	NaN	0	NaN	470	2263	2728
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2745	12.654	NaN	24785	30	0	4745.7	0.214			+	38694	SSKKEELE	8	83	475.24787362319444	NaN	0	475.2478942871094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSKKEELE_	REV__ENSG00000164151|ENST00000296564|ICE1;REV__ICE1|p.D1105Rfs*4|1|0.21|ENSG00000164151|chr5:5462639-5462640|-/G|frameshift_variant;REV__ICE1|p.F326Lfs*82|1|0.38|ENSG00000164151|chr5:5457612-5457612|T/-|frameshift_variant;REV__ICE1|p.G1104Efs*6|1|0.34|ENSG00000164151|chr5:5462640-5462640|G/-|frameshift_variant;REV__ICE1|p.H1965Afs*55|1|0.29|ENSG00000164151|chr5:5465219-5465220|-/A|frameshift_variant	68.78682469695295	1.7418937515398478	6				NaN	NaN	0	NaN	477	2266	2744
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2746	12.657	NaN	14606	30	0	2065.6	0.106	+			40515	STYSGQHQR	9	71	532.248358192699	1062.482163452198	2	532.2503051757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STYSGQHQR_	ENSG00000185085|ENST00000330574|INTS5;INTS5|p.A801Hfs*4|1|0.19|ENSG00000185085|chr11:62647679-62647679|C/-|frameshift_variant	176.44474024533739	0.0016668318535579616	6				NaN	NaN	0	NaN	478	2266	2744
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2747	12.659	NaN	22900	30	0	4427.2	0.106	+			22700	KVAISFMKE	9	71	534.7921742636298	1067.5697955940595	2	534.7943725585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_KVAISFM(Oxidation (M))KE_	PPP5C|p.T187A|1|0.4|ENSG00000011485|chr19:46376500-46376500|A/G|missense_variant	96.19043198914106	0.047412499214244314	6				NaN	NaN	0	NaN	479	2266	2744
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2748	12.661	NaN	4755.3	30	0	523.28	0.106				-1	 	0	59	493.24088753687977	492.2336110702798	1	493.2424011230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	480	2266	2744
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2749	12.663	NaN	4017.1	30	0	1129.8	0.106				-1	 	0	54	451.73448643159145	901.4544199299829	2	451.7357177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	481	2266	2744
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2750	12.665	NaN	12560	30	0	1079.6	0.106			+	24773	LIECIKEL	8	87	509.2864133514629	1016.5582737697258	2	509.2878723144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_LIEC(Carbamidomethyl (C))IKEL_	REV__CENPF|p.S2957Afs*6|1|0.52|ENSG00000117724|chr1:214657310-214657310|A/-|frameshift_variant;REV__CENPF|p.T1974Pfs*11|1|0.22|ENSG00000117724|chr1:214645483-214645483|A/-|frameshift_variant;REV__CENPF|p.T2189Hfs*3|1|0.28|ENSG00000117724|chr1:214646131-214646131|A/-|frameshift_variant;REV__ENSG00000117724|ENST00000366955|CENPF	73.97473282117947	0.3737790450121076	6				NaN	NaN	0	NaN	482	2266	2744
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2751	12.667	NaN	1913.3	30	0	819.23	0.033			+	30418	PWPRGAGPG	9	22	447.7335981696959	893.4526434061918	2	447.7396545410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PWPRGAGPG_	REV__ENSG00000157216|ENST00000610401|SSBP3;REV__ENST00000326956.11_1_1:54692806-54822351:-|nuORF;REV__ENST00000401540.2_1_2:130750765-130751497:+|nuORF;REV__ENST00000550646.2_1_14:20137708-20137885:+|nuORF;REV__nc|ENSG00000157216|Q9BWW4-2|SSBP3;REV__nc|ENSG00000157216|Q9BWW4-3|SSBP3	12.959181472943097	0.6112419832031292	6				NaN	NaN	0	NaN	483	2266	2744
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2764	12.694	NaN	46836	30	0	29296	0.214			+	7846	DQQTGLDRSK	10	66	574.2885408250468	1146.5625287168934	2	574.2904052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DQQTGLDRSK_	REV__ENSG00000164151|ENST00000296564|ICE1;REV__ICE1|p.H1965Afs*55|1|0.29|ENSG00000164151|chr5:5465219-5465220|-/A|frameshift_variant	66.9202029811203	0.3029018092171124	6				NaN	NaN	0	NaN	493	2269	2763
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2765	12.697	NaN	4270	30	0	871.59	0.106	+			39239	STAKRTLSK	9	67	496.29813691564544	NaN	0	496.29791259765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STAKRTLSK_	ENSG00000163714|ENST00000473835|U2SURP;ENST00000461591.5_1_3:142720470-142741912:+|nuORF;ENST00000470400.5_1_3:142720470-142740424:+|nuORF;ENST00000491827.1_1_3:142733158-142735829:+|nuORF;nc|ENSG00000163714|O15042-2|U2SURP;U2SURP|p.K866Nfs*10|1|0.31|ENSG00000163714|chr3:143050987-143050987|A/-|frameshift_variant;U2SURP|p.S934Afs*11|1|0.34|ENSG00000163714|chr3:143054963-143054963|C/-|frameshift_variant	63.53385203322761	0.134247007536971	6				NaN	NaN	0	NaN	494	2269	2763
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2766	12.699	NaN	6805.6	30	0	1489	0.106			+	-1	KGGAKAGFLRQ	11	69	587.838035013965	1173.66151709473	2	587.840087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))KGGAKAGFLRQ_	REV__NAV3|p.R1249Q|1|0.29|ENSG00000067798|chr12:78119942-78119942|G/A|missense_variant	47.657333605630114	0.4531673460382624	6				NaN	NaN	0	NaN	495	2269	2763
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2767	12.701	NaN	2513.6	30	0	319.27	0.106			+	24779	LIEQALARAQ	10	64	556.8234053271246	1111.6322577210492	2	556.8247680664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LIEQALARAQ_	REV__ECHDC2|p.R223Q|1|0.16|ENSG00000121310|chr1:52904680-52904680|C/T|missense_variant	101.25262130126117	0.07397688119410509	6				NaN	NaN	0	NaN	496	2269	2763
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2768	12.703	NaN	8634	30	0	5077.9	0.106			+	-1	CRQLCIQK	8	50	383.1944955165869	1146.5616571499609	3	383.1958312988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term),2 Carbamidomethyl (C)	_(Acetyl (Protein N-term))C(Carbamidomethyl (C))RQLC(Carbamidomethyl (C))IQK_	REV__ENST00000508110.5_1_4:187347442-187347706:-|nuORF	30.503639358989545	0.7238069182250283	6				NaN	NaN	0	NaN	497	2269	2763
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2769	12.705	NaN	4866.2	30	0	2460	0.106				-1	MPRCTWAMSM	10	32	623.2484016105145	1244.482250287829	2	623.2506713867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Oxidation (M)	_M(Oxidation (M))PRCTWAM(Oxidation (M))SM_	TF|p.R327Gfs*35|2|0.17|ENSG00000091513|chr3:133757870-133757870|C/-|frameshift_variant	15.641811463095205	0.7369665665077569	6				NaN	NaN	0	NaN	498	2269	2763
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2770	12.707	NaN	3741.6	30	0	1696.1	0.038			+	-1	FQCCGEQSVPG	11	22	606.2462679561786	1210.477982979157	2	606.2483520507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_FQC(Carbamidomethyl (C))CGEQSVPG_	REV__ENSG00000124688|ENST00000372171|MAD2L1BP;REV__ENST00000508232.1_1_6:43603609-43604431:+|nuORF;REV__nc|ENSG00000124688|Q15013-3|MAD2L1BP	14.137123925751023	0.8042936413770803	6				NaN	NaN	0	NaN	499	2269	2763
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2783	12.734	NaN	186510	30	0	48482	0.159				-1	 	0	96	509.7966841831434	1017.5788154330868	2	509.7983093261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	509	2272	2782
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2784	12.737	NaN	72097	30	0	9258.5	0.106				-1	 	0	124	483.26520796952076	964.5158630058415	2	483.2663269042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	510	2272	2782
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2785	12.739	NaN	25402	30	0	3439.8	0.106	+			9869	EQEVVADETP	10	56	558.7569417191393	1115.4993305050784	2	558.7587280273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EQEVVADETP_	ABCF1|p.P618Hfs*13|1|0.36|ENSG00000204574|chr6:30586268-30586268|C/-|frameshift_variant;ENSG00000204574|ENST00000326195|ABCF1;nc|ENSG00000204574|Q8NE71-2|ABCF1	29.170058357718403	0.6416167986984785	6				NaN	NaN	0	NaN	511	2272	2782
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2786	12.741	NaN	7781.6	30	0	1860.1	0.106	+			32626	QYRYGEKQ	8	68	536.2644673023171	1070.5143816714342	2	536.2662963867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QYRYGEKQ_	ENST00000442902.1_1_20:50727220-50727574:-|nuORF	58.78195531508484	0.5138399468736706	6				NaN	NaN	0	NaN	512	2272	2782
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2787	12.742	NaN	5324.5	30	0	1723.8	0.106			+	19671	KDMSTSLL	8	41	447.7335981696959	893.4526434061918	2	447.7348327636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KDMSTSLL_	REV__ENSG00000176473|ENST00000402312|WDR25;REV__WDR25|p.H424Pfs*45|1|0.16|ENSG00000176473|chr14:100526032-100526033|-/T|frameshift_variant	31.954861631926434	0.7126016770032289	6				NaN	NaN	0	NaN	513	2272	2782
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2788	12.744	NaN	15146	30	0	3255.9	0.106	+			11101	FFGVCFFVV	9	66	532.7664569395691	1063.5183609459382	2	532.7678833007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FFGVCFFVV_	ENST00000412082.6_1_16:20935625-20935910:+|nuORF	29.841539824830324	0.5243625958137083	6				NaN	NaN	0	NaN	514	2272	2782
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2789	12.746	NaN	6677	30	0	1448.8	0.036			+	-1	KMRNFQKK	8	62	548.3094983263429	1094.6044437194857	2	548.3119506835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_KM(Oxidation (M))RNFQKK_	REV__ARHGAP17|p.P543Lfs*55|1|0.3|ENSG00000140750|chr16:24939460-24939460|G/-|frameshift_variant;REV__ENSG00000140750|ENST00000289968|ARHGAP17;REV__ENST00000455311.6_3_16:25025246-25026645:-|nuORF;REV__ENST00000575447.1_1_16:24979927-25026645:-|nuORF;REV__nc|ENSG00000140750|Q68EM7-2|ARHGAP17;REV__nc|ENSG00000140750|Q68EM7-4|ARHGAP17;REV__nc|ENSG00000140750|Q68EM7-5|ARHGAP17;REV__nc|ENSG00000140750|Q68EM7-6|ARHGAP17	50.0245360154114	0.5941082100236891	6				NaN	NaN	0	NaN	515	2272	2782
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2807	12.784	NaN	15250	30	0	3289.9	0.204				-1	 	0	78	502.80699712179467	1003.5994413103894	2	502.8084716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	530	2275	2806
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2808	12.787	NaN	5883.1	30	0	1314.6	0.106			+	20219	KELILECQ	8	67	488.26295181263293	974.5113506920659	2	488.26422119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KELILECQ_	REV__ENSG00000111877|ENST00000619706|MCM9;REV__MCM9|p.R822Gfs*2|1|0.5|ENSG00000111877|chr6:118815792-118815792|T/-|frameshift_variant;REV__nc|ENSG00000111877|Q9NXL9-4|MCM9	68.78682469695295	0.41700713582915416	6				NaN	NaN	0	NaN	531	2275	2806
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2809	12.789	NaN	18845	30	0	4239.3	0.106	+			24293	LFARPQPLW	9	63	564.3214734174976	1126.628393901795	2	564.323486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LFARPQPLW_	ENST00000367602.7_1_1:180168067-180168433:+|nuORF	25.57405402267927	0.5642445186134241	6				NaN	NaN	0	NaN	532	2275	2806
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2810	12.791	NaN	3643.4	30	0	507.64	0.106				-1	CWWRPPAG	8	47	515.2424940626776	NaN	0	514.7877197265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_C(Carbamidomethyl (C))WWRPPAG_	ENST00000313367.6_1_7:25019719-25019770:-|nuORF	26.79610172149135	1.7418937515398478	6				NaN	NaN	0	NaN	533	2275	2806
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2811	12.793	NaN	8786.6	30	0	3387.5	0.106	+			2740	ARAKAAARR	9	53	324.20531646541684	969.5941199964506	3	324.206298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ARAKAAARR_	ENST00000308775.6_1_3:49507623-49547947:+|nuORF;ENST00000538711.5_1_3:49507611-49514302:+|nuORF;ENST00000541308.5_1_3:49507611-49530351:+|nuORF;ENST00000545947.5_1_3:49507611-49508472:+|nuORF	29.14955571784316	0.5308295550522326	6				NaN	NaN	0	NaN	534	2275	2806
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2812	12.795	NaN	6277	30	0	1304.6	0.106				-1	 	0	68	478.26811435935633	954.5216757855127	2	478.2689208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	535	2275	2806
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2813	12.796	NaN	2724.9	30	0	528.94	0.036	+			31663	QNEYEIYD	8	57	537.2254638671875	NaN	0	537.2254638671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QNEYEIYD_	tr|U7T474|U7T474_FUSNUAutotransporterdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00282PE=4SV=1	42.47446043378293	1.7418937515398478	6				NaN	NaN	0	NaN	536	2275	2806
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2830	12.832	NaN	33489	30	0	9841.7	0.214			+	20509	KFGISQHAG	9	84	472.7514139944293	943.4882750556586	2	472.7525634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KFGISQHAG_	REV__ACADVL|p.F461*|1|0.27|ENSG00000072778|chr17:7224016-7224017|TT/-|frameshift_variant;REV__ACADVL|p.G439Vfs*5|2|0.36|ENSG00000072778|chr17:7223854-7223854|G/-|frameshift_variant;REV__ENSG00000072778|ENST00000356839|ACADVL;REV__ENST00000577191.5_1_17:7123303-7125473:+|nuORF;REV__nc|ENSG00000072778|P49748-2|ACADVL;REV__nc|ENSG00000072778|P49748-3|ACADVL	49.44154591367651	0.3095138337212152	6				NaN	NaN	0	NaN	550	2278	2829
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2831	12.835	NaN	3164.1	30	0	435.09	0.106	+			22260	KTATAVAHCK	10	58	543.790450487269	NaN	0	543.7904663085938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_KTATAVAHC(Carbamidomethyl (C))K_	chr19:39435705-39435848|468|276.17|0.0|24.72|-|0|RPS16,RPS16|1;ENSG00000105193|ENST00000251453|RPS16;ENST00000601390.1_1_19:39926180-39926535:-|nuORF	70.39856735676683	0.14936190052600148	6				NaN	NaN	0	NaN	551	2278	2829
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2832	12.837	NaN	1540.5	30	0	310.11	0.106			+	22035	KSIDTIRV	8	42	466.2818226041623	NaN	0	466.28179931640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KSIDTIRV_	REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-10|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-13|TTN;REV__nc|ENSG00000155657|Q8WZ42-2|TTN;REV__nc|ENSG00000155657|Q8WZ42-3|TTN;REV__nc|ENSG00000155657|Q8WZ42-4|TTN;REV__nc|ENSG00000155657|Q8WZ42-5|TTN;REV__nc|ENSG00000155657|Q8WZ42-7|TTN;REV__nc|ENSG00000155657|Q8WZ42-8|TTN;REV__nc|ENSG00000155657|Q8WZ42-9|TTN;REV__nc|ENSG00000155657|Q8WZ42|TTN;REV__TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;REV__TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;REV__TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;REV__TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;REV__TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;REV__TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant	39.252832667884924	1.7418937515398478	6				NaN	NaN	0	NaN	552	2278	2829
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2833	12.839	NaN	7777.8	30	0	3263.6	0.106				-1	 	0	62	456.231308691367	910.4480644495341	2	456.23248291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	553	2278	2829
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2834	12.841	NaN	4701.3	30	0	534.79	0.106	+			33074	REKKTENSKL	10	64	616.849709356741	1231.6848657802818	2	616.8518676757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_REKKTENSKL_	ENSG00000105835|ENST00000222553|NAMPT;ENST00000393618.5_1_7:105910735-105925330:-|nuORF;ENST00000486949.5_1_7:105912936-105925330:-|nuORF;ENST00000489358.5_1_7:105912543-105925330:-|nuORF;ENST00000489732.1_1_7:105917445-105925330:-|nuORF	41.42661286455405	0.5359995577334734	6				NaN	NaN	0	NaN	554	2278	2829
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2835	12.842	NaN	18514	30	0	3874.7	0.034			+	-1	SAAREGQHA	9	59	484.7305651716547	967.4465774101094	2	484.7317810058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SAAREGQHA_	REV__ENST00000570214.5_2_16:58711323-58717994:-|nuORF	38.80614096846853	0.43426287593479557	6				NaN	NaN	0	NaN	555	2278	2829
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2836	12.843	NaN	4842.9	30	0	974.49	0.14				-1	 	0	60	502.80699712179467	1003.5994413103894	2	502.7781982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	556	2278	2829
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2852	12.878	NaN	16936	30	0	5542.2	0.214				-1	 	0	83	473.3068397439094	944.5991265546188	2	473.30792236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	569	2281	2851
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2853	12.882	NaN	6044.5	30	0	1010.4	0.106			+	38330	SRGRRAKK	8	66	479.8045250484011	957.5944971636022	2	479.8055725097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SRGRRAKK_	REV__ENSG00000113282|ENST00000411809|CLINT1;REV__nc|ENSG00000113282|Q14677-2|CLINT1;REV__nc|ENSG00000113282|Q14677-3|CLINT1	56.72105179125745	0.5342425954139568	6				NaN	NaN	0	NaN	570	2281	2851
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2854	12.884	NaN	4211.7	30	0	839.38	0.106			+	-1	KVFEKLMKP	9	62	568.3315125387676	1134.648472144335	2	568.3334350585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_KVFEKLM(Oxidation (M))KP_	REV__ROPN1|p.A22V|1|0.14|ENSG00000065371|chr3:123980417-123980417|G/A|missense_variant	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	571	2281	2851
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2855	12.886	NaN	5514	30	0	647.77	0.106	+			17249	HWASISEHCR	10	35	613.2818145571666	1224.5490761811332	2	613.2837524414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HWASISEHCR_	ENST00000375859.3_1_9:91093137-91093245:+|nuORF	18.262085536374414	0.7236521404371882	6				NaN	NaN	0	NaN	572	2281	2851
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2856	12.887	NaN	3084.8	30	0	543.23	0.106	+			19756	KDVVEIAVP	9	47	485.28730618074707	NaN	0	485.28729248046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KDVVEIAVP_	ENSG00000139910|ENST00000539517|NOVA1;nc|ENSG00000139910|P51513-5|NOVA1	37.15910966729921	0.2899585034171616	6				NaN	NaN	0	NaN	573	2281	2851
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2857	12.889	NaN	8944.3	30	0	2158	0.037	+			46581	VFNPYNNRK	9	56	576.301081052237	1150.587609171274	2	576.3031005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VFNPYNNRK_	ENSG00000127329|ENST00000334414|PTPRB;nc|ENSG00000127329|P23467-2|PTPRB;nc|ENSG00000127329|P23467-4|PTPRB;nc|ENSG00000127329|P23467|PTPRB;PTPRB|p.P1449Lfs*9|1|0.31|ENSG00000127329|chr12:70555303-70555303|G/-|frameshift_variant	29.14955571784316	0.5308295550522326	6				NaN	NaN	0	NaN	574	2281	2851
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2858	12.89	NaN	4549.4	30	0	813.46	0.14			+	32519	QVQRKYTE	8	60	526.2798378203869	1050.5451227075737	2	526.28173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QVQRKYTE_	REV__ENSG00000134709|ENST00000371208|HOOK1;REV__ENST00000465876.5_1_1:60281005-60331594:+|nuORF;REV__nc|ENSG00000134709|Q9UJC3-2|HOOK1	47.91560031466742	0.6071945918984287	6				NaN	NaN	0	NaN	575	2281	2851
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2873	12.923	NaN	22434	30	0	9940.5	0.213			+	34541	RVKEPAQCML	10	69	616.3173471956743	1230.6201414581485	2	616.3192749023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_RVKEPAQC(Carbamidomethyl (C))ML_	REV__ENSG00000125848|ENST00000341420|FLRT3;REV__FLRT3|p.I542Rfs*9|1|0.03|ENSG00000125848|chr20:14325882-14325883|-/CTCTATCC|frameshift_variant	52.936696900407355	0.4300801048568001	6				NaN	NaN	0	NaN	587	2284	2872
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2874	12.927	NaN	6902.1	30	0	1647.9	0.106			+	21838	KRGMAIQK	8	60	474.27843829201987	946.5423236508398	2	474.2794189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_KRGM(Oxidation (M))AIQK_	REV__ENSG00000008256|ENST00000350796|CYTH3;REV__nc|ENSG00000008256|O43739|CYTH3	85.35947970620816	0.2915182781752196	6				NaN	NaN	0	NaN	588	2284	2872
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2875	12.929	NaN	4453.9	30	0	1499	0.106			+	30425	PYELSSSLEQG	11	26	605.284733413105	1208.5549138930098	2	605.2858276367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PYELSSSLEQG_	REV__L1PA8_dup4178|chr8:94121319-94127043:-|4.057818296907117|0.2856926403965029|3.83|481.0|213|1|anti-sense	9.705651100619752	0.8250432705525658	6				NaN	NaN	0	NaN	589	2284	2872
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2876	12.931	NaN	2315.4	30	0	554.89	0.106	+			22149	KSRAWVLE	8	40	330.1920331188247	NaN	0	329.8299255371094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KSRAWVLE_	ENSG00000071462|ENST00000265758|BUD23;ENST00000436944.5_1_7:73101164-73117856:+|nuORF;ENST00000463307.5_1_7:73107559-73112213:+|nuORF;ENST00000471215.1_1_7:73111917-73112213:+|nuORF;nc|ENSG00000071462|O43709-3|BUD23	37.15910966729921	1.7418937515398478	6				NaN	NaN	0	NaN	590	2284	2872
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2877	12.932	NaN	2775.2	30	0	493.97	0.106	+			49078	VVKPKKAAPK	10	48	355.90963815832345	NaN	0	355.9096374511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVKPKKAAPK_	ENSG00000187837|ENST00000343677|H1-2	68.84614121027924	0.16203925040239886	6				NaN	NaN	0	NaN	591	2284	2872
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2878	12.934	NaN	1720.2	30	0	345.15	0.034			+	30437	PYLSVCRK	8	45	483.26520796952076	964.5158630058415	2	483.74951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PYLSVCRK_	REV__nc|ENSG00000108018|Q8WY21-4|SORCS1	25.450171626174864	0.7628259754767981	6				NaN	NaN	0	NaN	592	2284	2872
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2879	12.935	NaN	4354.5	30	0	1063	0.143				-1	VRCLSCKCL	9	55	598.2926035405301	1194.57065414786	2	598.8263549804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	3 Carbamidomethyl (C)	_VRC(Carbamidomethyl (C))LSC(Carbamidomethyl (C))KC(Carbamidomethyl (C))L_	ADNP2|p.K1045Nfs*29|1|0.42|ENSG00000101544|chr18:80138543-80138543|A/-|frameshift_variant;ENSG00000101544|ENST00000262198|ADNP2	27.882242232435846	0.5426732730940306	6				NaN	NaN	0	NaN	593	2284	2872
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2896	12.972	NaN	160620	30	0	36415	0.161			+	-1	PVSVPLKANSC	11	96	586.3106003128837	1170.6066476925673	2	586.3123779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_PVSVPLKANSC(Carbamidomethyl (C))_	REV__ENSG00000085511|ENST00000392142|MAP3K4;REV__nc|ENSG00000085511|Q9Y6R4-2|MAP3K4	54.776311868738084	0.3700837260462177	6				NaN	NaN	0	NaN	607	2287	2895
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2897	12.975	NaN	25393	30	0	6227.6	0.106			+	33789	RQFKNVADES	10	70	597.2994004132156	1192.5842478932311	2	597.301513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RQFKNVADES_	REV__ENST00000434206.1_1_3:43020805-43095327:+|nuORF	39.252832667884924	0.5560298534376815	6				NaN	NaN	0	NaN	608	2287	2895
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2898	12.977	NaN	11447	30	0	4095.3	0.106				-1	AGHQLQMCYQ	10	67	618.2688031400172	1234.5230533468343	2	618.2704467773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_AGHQLQMC(Carbamidomethyl (C))YQ_	ENSG00000117114|ENST00000686636|ADGRL2;nc|ENSG00000117114|O95490-2|ADGRL2;nc|ENSG00000117114|O95490-5|ADGRL2;nc|ENSG00000117114|O95490-6|ADGRL2;nc|ENSG00000117114|O95490-7|ADGRL2;nc|ENSG00000117114|O95490|ADGRL2	20.94693142431847	0.7087701759873708	6				NaN	NaN	0	NaN	609	2287	2895
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2899	12.978	NaN	4671	30	0	1214	0.106				-1	 	0	64	496.7713303892301	991.5281078452603	2	496.7725830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	610	2287	2895
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2900	12.98	NaN	1082.1	30	0	195.38	0.106			+	44454	TSNKSLVK	8	47	438.7609588658098	NaN	0	438.7608947753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TSNKSLVK_	REV__ENSG00000109944|ENST00000227349|JHY	30.503639358989545	1.7418937515398478	6				NaN	NaN	0	NaN	611	2287	2895
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2901	12.982	NaN	1452.5	30	0	206.11	0.106	+			20051	KEKDSKGTRL	10	42	581.3330688476562	NaN	0	581.3330688476562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KEKDSKGTRL_	ENSG00000058272|ENST00000450142|PPP1R12A;ENST00000550001.1_1_12:80201004-80203592:-|nuORF;nc|ENSG00000058272|O14974-2|PPP1R12A;nc|ENSG00000058272|O14974-3|PPP1R12A;nc|ENSG00000058272|O14974-4|PPP1R12A;nc|ENSG00000058272|O14974-5|PPP1R12A;PPP1R12A|p.N540Ifs*23|1|0.49|ENSG00000058272|chr12:79807262-79807262|T/-|frameshift_variant	31.634271133179894	0.39630454568332174	6				NaN	NaN	0	NaN	612	2287	2895
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2902	12.984	NaN	2840.1	30	0	1199	0.035	+			34436	RTVGVSKKK	9	41	334.8854543184336	NaN	0	334.8853759765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RTVGVSKKK_	ENSG00000231500|ENST00000439602|RPS18;ENST00000412454.1_1_17:14608395-14608521:-|nuORF	54.776311868738084	0.17377682019723872	6				NaN	NaN	0	NaN	613	2287	2895
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2915	13.012	NaN	49578	30	0	7217.7	0.214				-1	 	0	91	467.2703397528634	932.5261265725268	2	467.2716064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	623	2290	2914
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2916	13.015	NaN	38482	30	0	5019.7	0.106	+			39044	SSSPGTSVKK	10	84	489.2653169057814	976.5160808783628	2	489.2665100097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSSPGTSVKK_	ENSG00000135720|ENST00000258198|DYNC1LI2;nc|ENSG00000135720|O43237-2|DYNC1LI2	114.8945686534367	0.03454040281423369	6				NaN	NaN	0	NaN	624	2290	2914
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2917	13.017	NaN	9146.4	30	0	1209.1	0.106	+			40610	SVAKETARR	9	71	509.29380114224256	NaN	0	509.2937316894531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVAKETARR_	ENSG00000143553|ENST00000368685|SNAPIN;ENST00000478558.1_1_1:153631742-153633774:+|nuORF	64.20726635412375	0.13137488984569443	6				NaN	NaN	0	NaN	625	2290	2914
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2918	13.019	NaN	22560	30	0	5358.6	0.106	+			21055	KKKWRKDS	8	72	538.322465606615	1074.6303782800298	2	538.324462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KKKWRKDS_	EHMT2|p.L855Cfs*36|2|0.23|ENSG00000204371|chr6:31884685-31884685|G/-|frameshift_variant;ENSG00000204371|ENST00000375537|EHMT2;ENST00000480912.5_1_6:31847863-31860642:-|nuORF;nc|ENSG00000204371|Q96KQ7-2|EHMT2	65.80317337860623	0.44433089765398776	6				NaN	NaN	0	NaN	626	2290	2914
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2919	13.021	NaN	23999	30	0	9897.5	0.106			+	11600	FPSIRARTK	9	68	359.2170722049557	1074.629387215067	3	359.2183837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FPSIRARTK_	REV__ENSG00000198570|ENST00000680073|RD3	34.172542307311794	0.4838870758800184	6				NaN	NaN	0	NaN	627	2290	2914
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2920	13.023	NaN	3892	30	0	823.95	0.106			+	22222	KSVSTGKG	8	45	382.219051035343	NaN	0	382.2190246582031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KSVSTGKG_	REV__ENST00000597219.1_3_19:58095687-58095951:+|nuORF	58.78195531508484	1.7418937515398478	6				NaN	NaN	0	NaN	628	2290	2914
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2921	13.024	NaN	5962.7	30	0	2166.1	0.036	+			22858	KVKGWLLPE	9	62	535.326065558573	1068.6375781839458	2	535.328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KVKGWLLPE_	ENSG00000143416|ENST00000368868|SELENBP1;ENST00000427977.6_1_1:151337413-151341586:-|nuORF;ENST00000443708.5_1_1:151337021-151341586:-|nuORF;ENST00000455397.5_1_1:151337021-151341586:-|nuORF;ENST00000474352.5_1_1:151337855-151338307:-|nuORF;nc|ENSG00000143416|Q13228-2|SELENBP1;nc|ENSG00000143416|Q13228-3|SELENBP1;nc|ENSG00000143416|Q13228-4|SELENBP1	99.37495909608758	0.03983967222258828	6				NaN	NaN	0	NaN	629	2290	2914
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2936	13.056	NaN	7798.7	30	0	1474.5	0.214	+			21755	KQPYAQHQ	8	65	500.2532207390091	998.4918885448183	2	500.254638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KQPYAQHQ_	ENSG00000239305|ENST00000237455|RNF103	65.80317337860623	0.44433089765398776	6				NaN	NaN	0	NaN	641	2293	2935
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2937	13.06	NaN	5832.2	30	0	1022.7	0.106			+	31775	QPICPCLNQ	9	67	508.23978435480376	1014.4650157764075	2	508.24078369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QPICPCLNQ_	REV__ENSG00000213901|ENST00000409878|SLC23A3;REV__nc|ENSG00000213901|Q6PIS1-2|SLC23A3;REV__nc|ENSG00000213901|Q6PIS1-5|SLC23A3	45.9519527083369	0.35044536499095585	6				NaN	NaN	0	NaN	642	2293	2935
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2938	13.062	NaN	6037.5	30	0	1238.4	0.106	+			19946	KEFPYIKN	8	69	519.7866231574624	1037.5586933817247	2	519.7883911132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEFPYIKN_	tr|U7T3K2|U7T3K2_FUSNUCelldivisionproteinFtsWOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00694PE=4SV=1	74.25504064058377	0.37144338840759816	6				NaN	NaN	0	NaN	643	2293	2935
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2939	13.063	NaN	3341.2	30	0	1122.5	0.106				-1	 	0	35	392.2258818821127	782.4372108310254	2	392.2270812988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	644	2293	2935
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2940	13.065	NaN	4021.1	30	0	731.39	0.106				-1	 	0	59	448.23472670154644	447.22745023494645	1	448.23486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	645	2293	2935
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2941	13.067	NaN	4503.9	30	0	625.33	0.036	+			5753	AVGKNKRLTK	10	51	557.8565801383552	NaN	0	557.856689453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AVGKNKRLTK_	ENSG00000145425|ENST00000274065|RPS3A;ENST00000507485.1_1_4:152020792-152024033:+|nuORF	35.15202426646627	0.38475398474706135	6				NaN	NaN	0	NaN	646	2293	2935
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2942	13.068	NaN	3917.1	30	0	536.95	0.141			+	-1	EWCSTWQT	8	46	549.2190551757812	NaN	0	549.2190551757812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_EWC(Carbamidomethyl (C))STWQT_	REV__ENST00000592248.5_3_17:40282455-40282545:-|nuORF	25.450171626174864	1.7418937515398478	6				NaN	NaN	0	NaN	647	2293	2935
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2959	13.105	NaN	152710	30	0	22318	0.187				-1	 	0	121	438.74718671081746	875.4798204884349	2	438.74835205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	661	2296	2958
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2960	13.108	NaN	7117.5	30	0	944.12	0.106	+			30712	QDFRAAAARG	10	73	531.777570960979	1061.540588988758	2	531.7809448242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QDFRAAAARG_	ENST00000508198.5_1_4:152330433-152375872:+|nuORF	51.52775601994872	0.4429225830406686	6				NaN	NaN	0	NaN	662	2296	2958
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2961	13.11	NaN	25354	30	0	3520.1	0.106				-1	 	0	82	471.23677344028073	940.4589939473615	2	471.23779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	663	2296	2958
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2962	13.112	NaN	5819.5	30	0	624.4	0.106	+			32256	QTLKNTVR	8	64	480.28492637992144	NaN	0	480.28497314453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QTLKNTVR_	ENST00000397988.7_1_18:61645690-61649045:+|nuORF	79.45101966838831	1.7418937515398478	6				NaN	NaN	0	NaN	664	2296	2958
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2963	13.113	NaN	13023	30	0	4520.9	0.106	+			22622	KTTTATATPK	10	68	510.28902720866336	1018.5635014841267	2	510.2904357910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KTTTATATPK_	ENST00000262126.8_1_18:9136811-9136937:+|nuORF	117.5257442709337	0.03082425562130952	6				NaN	NaN	0	NaN	665	2296	2958
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2964	13.115	NaN	5967.3	30	0	917.53	0.106	+			3539	ASSSGSTAIKK	11	70	518.7851035500188	NaN	0	518.7854614257812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASSSGSTAIKK_	ENSG00000131171|ENST00000373212|SH3BGRL	41.080066990542036	0.3793850210388171	6				NaN	NaN	0	NaN	666	2296	2958
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2965	13.117	NaN	5799.7	30	0	840.32	0.036	+			32896	RDQIKTWVA	9	56	558.8124883922026	NaN	0	558.8125610351562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RDQIKTWVA_	CNOT3|p.P458Lfs*45|1|0.17|ENSG00000088038|chr19:54148705-54148705|C/-|frameshift_variant;ENSG00000088038|ENST00000221232|CNOT3	26.69291269510374	0.34280015626154364	6				NaN	NaN	0	NaN	667	2296	2958
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2982	13.152	NaN	711360	30	0	118290	0.112				-1	 	0	133	508.26086172881656	1014.5071705244331	2	508.26251220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	681	2299	2981
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2983	13.154	NaN	232520	30	0	142250	0.106			+	14187	GSRPRKRI	8	80	323.87367701162145	968.5992016350644	3	323.8746337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSRPRKRI_	REV__ENST00000550853.1_2_9:136891668-136894151:+|nuORF;REV__ENST00000603928.2_2_9:136893890-136894151:+|nuORF	45.9519527083369	0.6193794311207887	6				NaN	NaN	0	NaN	682	2299	2981
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2984	13.156	NaN	411150	30	0	193880	0.106				-1	 	0	131	339.17611488467946	1014.5065152542384	3	339.1771545410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	683	2299	2981
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2985	13.158	NaN	6778.6	30	0	923.24	0.106				-1	 	0	71	452.7448144721831	903.4750760111663	2	452.7459716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	684	2299	2981
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2986	13.16	NaN	75852	30	0	26332	0.106	+			31192	QGPTQEDCTT	10	63	540.2187240808214	1078.4228952284427	2	540.2203979492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QGPTQEDCTT_	ENSG00000099139|ENST00000674117|PCSK5;nc|ENSG00000099139|Q92824|PCSK5	37.81151784470057	0.569310847604193	6				NaN	NaN	0	NaN	685	2299	2981
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2987	13.162	NaN	7753	30	0	1341.3	0.106				-1	 	0	75	478.26811435935633	954.5216757855127	2	478.75830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	686	2299	2981
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2988	13.164	NaN	22893	30	0	7076.5	0.035			+	24282	LEVYPFIL	8	49	497.28622043853613	992.5578879438723	2	497.2877502441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LEVYPFIL_	REV__ENSG00000138413|ENST00000345146|IDH1;REV__ENST00000462386.5_1_2:209112975-209118617:-|nuORF;REV__ENST00000481557.1_1_2:209116152-209118617:-|nuORF	21.70233525837049	0.7917639344264583	6				NaN	NaN	0	NaN	687	2299	2981
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	2989	13.164	NaN	2720.1	30	0	853.15	0.144				-1	EGTARITCLG	10	31	359.84906005859375	NaN	0	359.84906005859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Carbamidomethyl (C)	_EGTARITC(Carbamidomethyl (C))LG_	ENSG00000121904|ENST00000373381|CSMD2;nc|ENSG00000121904|Q7Z408|CSMD2	24.519189625965996	0.41966695327750003	6				NaN	NaN	0	NaN	688	2299	2981
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3007	13.202	NaN	13790	30	0	1855.4	0.214	+			5609	AVCGKVKCK	9	72	525.284286274801	NaN	0	525.2841796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_AVC(Carbamidomethyl (C))GKVKC(Carbamidomethyl (C))K_	ENSG00000135317|ENST00000314673|SNX14;ENST00000508980.5_1_6:86270935-86284080:-|nuORF;nc|ENSG00000135317|Q9Y5W7-2|SNX14;nc|ENSG00000135317|Q9Y5W7-3|SNX14;nc|ENSG00000135317|Q9Y5W7-4|SNX14;SNX14|p.F173Lfs*5|3|0.42|ENSG00000135317|chr6:85565362-85565362|A/-|frameshift_variant	71.29570347882199	0.10120983364817086	6				NaN	NaN	0	NaN	703	2302	3006
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3008	13.206	NaN	57080	30	0	13864	0.106				-1	VSLICPLVK	9	101	343.54410014131975	1027.6104710241593	3	343.5453186035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_VSLIC(Carbamidomethyl (C))PLVK_	ENSG00000105229|ENST00000262971|PIAS4	47.657333605630114	0.33044192980041115	6				NaN	NaN	0	NaN	704	2302	3006
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3009	13.208	NaN	5910.1	30	0	2706	0.106				-1	AVCGKVKCK	9	45	350.52354556902014	1048.5488073072604	3	350.52484130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_AVC(Carbamidomethyl (C))GKVKC(Carbamidomethyl (C))K_	ENSG00000135317|ENST00000314673|SNX14;ENST00000508980.5_1_6:86270935-86284080:-|nuORF;nc|ENSG00000135317|Q9Y5W7-2|SNX14;nc|ENSG00000135317|Q9Y5W7-3|SNX14;nc|ENSG00000135317|Q9Y5W7-4|SNX14;SNX14|p.F173Lfs*5|3|0.42|ENSG00000135317|chr6:85565362-85565362|A/-|frameshift_variant	27.882242232435846	0.5426732730940306	6				NaN	NaN	0	NaN	705	2302	3006
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3010	13.21	NaN	15226	30	0	2298	0.106	+			47683	VSDTNQHVK	9	75	514.2607492403998	1026.5069455475996	2	514.262451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSDTNQHVK_	ENSG00000137713|ENST00000527614|PPP2R1B;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;nc|ENSG00000137713|P30154-2|PPP2R1B;nc|ENSG00000137713|P30154-3|PPP2R1B;nc|ENSG00000137713|P30154-5|PPP2R1B	154.1183686248401	0.005909203230691971	6				NaN	NaN	0	NaN	706	2302	3006
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3011	13.212	NaN	1993.4	30	0	212.39	0.106				-1	 	0	49	429.2262928326075	856.438032732015	2	429.22747802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	707	2302	3006
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3012	13.213	NaN	9910	30	0	3524.2	0.036				-1	QMAPFRQC	8	64	527.2351169695215	1052.455681005843	2	527.2369384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),Oxidation (M)	_QM(Oxidation (M))APFRQC(Carbamidomethyl (C))_	ENST00000465670.1_1_7:2419335-2419509:+|nuORF	26.79610172149135	0.7524337208463756	6				NaN	NaN	0	NaN	708	2302	3006
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3013	13.214	NaN	4901.3	30	0	1071.1	0.14			+	20498	KFDDVAQGSA	10	64	519.2498008794404	1036.4850488256807	2	519.2518920898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KFDDVAQGSA_	REV__ENSG00000144802|ENST00000326172|NFKBIZ;REV__ENST00000486444.1_1_3:101568430-101571632:+|nuORF;REV__nc|ENSG00000144802|Q9BYH8-2|NFKBIZ;REV__nc|ENSG00000144802|Q9BYH8-3|NFKBIZ;REV__NFKBIZ|p.Q210Pfs*6|1|0.31|ENSG00000144802|chr3:101853153-101853154|-/C|frameshift_variant	46.45678178249821	0.4896490706773647	6				NaN	NaN	0	NaN	709	2302	3006
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3030	13.251	NaN	10144	30	0	1409	0.214				-1	 	0	72	523.8122902096374	1045.6100274860746	2	523.8140258789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	723	2305	3029
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3031	13.255	NaN	9301.1	30	0	935.41	0.106	+			47662	VSDANQHVK	9	69	499.2550470554095	996.495541177619	2	499.2565002441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSDANQHVK_	ENSG00000105568|ENST00000322088|PPP2R1A	141.52041321563706	0.009766778904176347	6				NaN	NaN	0	NaN	724	2305	3029
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3032	13.257	NaN	36225	30	0	6061.7	0.106	+			9356	EISELQPSSH	10	78	563.7729538805676	1125.531354827935	2	563.7752075195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EISELQPSSH_	ENST00000503848.5_1_5:145435703-145442068:+|nuORF	37.50817390946774	0.5721060100277453	6				NaN	NaN	0	NaN	725	2305	3029
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3033	13.258	NaN	35378	30	0	8837.8	0.106			+	-1	KKMTSNTVK	9	63	526.7923502367337	1051.5701475402673	2	526.7943115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_KKM(Oxidation (M))TSNTVK_	REV__TSHZ3|p.A418T|1|0.32|ENSG00000121297|chr19:31278541-31278541|C/T|missense_variant	29.14955571784316	0.5308295550522326	6				NaN	NaN	0	NaN	726	2305	3029
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3034	13.26	NaN	2661.9	30	0	496.51	0.106				-1	PCRIHVRP	8	49	517.7872663511828	NaN	0	517.8053588867188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_PC(Carbamidomethyl (C))RIHVRP_	nc|ENSG00000099875|Q9HBH9-2|MKNK2	26.79610172149135	1.7418937515398478	6				NaN	NaN	0	NaN	727	2305	3029
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3035	13.262	NaN	1770.4	30	0	492.36	0.035				-1	SVLGNYMVV	9	37	333.1727239341035	996.4963424025104	3	333.17340087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_SVLGNYM(Oxidation (M))VV_	ENSG00000105429|ENST00000251268|MEGF8;MEGF8|p.D1331Tfs*8|1|0.35|ENSG00000105429|chr19:42353999-42353999|C/-|frameshift_variant;MEGF8|p.G1586Dfs*144|1|0.39|ENSG00000105429|chr19:42356903-42356903|G/-|frameshift_variant;MEGF8|p.G1861Efs*10|1|0.13|ENSG00000105429|chr19:42360864-42360864|G/-|frameshift_variant;MEGF8|p.G2143Afs*20|2|0.22|ENSG00000105429|chr19:42368603-42368603|G/-|frameshift_variant;MEGF8|p.P499Rfs*19|1|0.53|ENSG00000105429|chr19:42337186-42337186|C/-|frameshift_variant;MEGF8|p.R1953Pfs*3|1|0.19|ENSG00000105429|chr19:42362390-42362391|-/C|frameshift_variant;MEGF8|p.T1670Qfs*60|3|0.4|ENSG00000105429|chr19:42357575-42357575|C/-|frameshift_variant;MEGF8|p.Y532Tfs*9|1|0.26|ENSG00000105429|chr19:42343551-42343551|G/-|frameshift_variant;nc|ENSG00000105429|Q7Z7M0-2|MEGF8	32.81241826257853	0.4965981579233955	6				NaN	NaN	0	NaN	728	2305	3029
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3036	13.263	NaN	20273	30	0	6765	0.141			+	16556	HEYRSRAR	8	74	537.7814847315735	1073.548416529947	2	537.78369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HEYRSRAR_	REV__ENSG00000036530|ENST00000261835|CYP46A1	44.116797842482775	0.6307669463330267	6				NaN	NaN	0	NaN	729	2305	3029
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3053	13.299	NaN	13518	30	0	2282.2	0.214			+	38388	SRTWSPSP	8	65	459.22759648089254	916.4406400285851	2	459.2288513183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SRTWSPSP_	REV__nc|ENSG00000243660|B1APH4|ZNF487	68.484700416344	0.4195245774506064	6				NaN	NaN	0	NaN	743	2308	3052
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3054	13.303	NaN	8231.9	30	0	1260.4	0.106	+			20247	KELYDLRQ	8	64	532.7884327275566	1063.562312521913	2	532.7923583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KELYDLRQ_	CDR2|p.T201Qfs*2|1|0.34|ENSG00000140743|chr16:22347729-22347729|T/-|frameshift_variant;ENSG00000140743|ENST00000268383|CDR2	63.30626980617807	0.4690498839812213	6				NaN	NaN	0	NaN	744	2308	3052
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3055	13.305	NaN	8843.1	30	0	2344.5	0.106	+			9478	EKRFTVTIG	9	58	525.8015779517389	1049.5886029702776	2	525.8033447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EKRFTVTIG_	ENSG00000158545|ENST00000301011|ZC3H18;ZC3H18|p.Q804Sfs*15|1|0.32|ENSG00000158545|chr16:88628051-88628051|C/-|frameshift_variant;ZC3H18|p.R680Gfs*5|4|0.4|ENSG00000158545|chr16:88624733-88624733|C/-|frameshift_variant;ZC3H18|p.R680Qfs*14|1|0.38|ENSG00000158545|chr16:88624732-88624733|-/C|frameshift_variant	32.81241826257853	0.4965981579233955	6				NaN	NaN	0	NaN	745	2308	3052
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3056	13.306	NaN	7743.3	30	0	962.09	0.106			+	37096	SISLLWPCT	9	60	340.51273615686773	1018.5163790708032	3	340.51373291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SISLLWPCT_	REV__ENST00000561302.5_1_15:76430142-76521275:+|nuORF	30.503639358989545	0.5181749237905803	6				NaN	NaN	0	NaN	746	2308	3052
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3057	13.308	NaN	4854.6	30	0	631.02	0.106				-1	 	0	62	500.2810048051571	998.5474566771143	2	500.28228759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	747	2308	3052
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3058	13.31	NaN	4664.2	30	0	1543.9	0.034	+			22615	KTTQDVKK	8	55	474.27843829201987	946.5423236508398	2	474.2790832519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KTTQDVKK_	CCNE2|p.R42Efs*38|1|0.07|ENSG00000175305|chr8:94893932-94893932|T/-|frameshift_variant;ENSG00000175305|ENST00000308108|CCNE2;ENST00000517487.5_1_8:95906073-95906449:-|nuORF;nc|ENSG00000175305|O96020-2|CCNE2	60.11826168202944	0.5006107059937851	6				NaN	NaN	0	NaN	748	2308	3052
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3059	13.311	NaN	3567.4	30	0	923.58	0.141				-1	MESILMTLQ	9	37	541.2689289402942	1080.5233049473884	2	541.2711181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_M(Oxidation (M))ESILMTLQ_	ENST00000296721.8_1_5:148719739-148719907:+|nuORF	20.94693142431847	0.6074874384046576	6				NaN	NaN	0	NaN	749	2308	3052
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3073	13.342	NaN	7478.2	30	0	1025.6	0.215	+			33322	RGSGSESPQR	10	64	530.760543584088	1059.506534234976	2	530.7622680664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RGSGSESPQR_	ENST00000509151.5_1_4:56376191-56412799:-|nuORF	53.08895987439943	0.42869529153390606	6				NaN	NaN	0	NaN	760	2311	3072
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3074	13.346	NaN	5024.6	30	0	953.06	0.106				-1	 	0	53	421.75721399786715	841.4998750625343	2	421.7581787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	761	2311	3072
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3075	13.348	NaN	10044	30	0	2095.2	0.106				-1	 	0	80	621.8179545288506	1241.621356124501	2	621.8197631835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	762	2311	3072
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3076	13.349	NaN	8331.5	30	0	1680	0.106				-1	 	0	65	480.7577897671085	959.501026601017	2	480.75885009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	763	2311	3072
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3077	13.351	NaN	6504.9	30	0	1358.4	0.106	+			4955	ATQTPVSNKK	10	70	537.2995894083786	1072.584625883557	2	537.3016967773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATQTPVSNKK_	ENSG00000137804|ENST00000559596|NUSAP1;nc|ENSG00000137804|Q9BXS6-2|NUSAP1;nc|ENSG00000137804|Q9BXS6-3|NUSAP1;nc|ENSG00000137804|Q9BXS6-4|NUSAP1;nc|ENSG00000137804|Q9BXS6-5|NUSAP1;nc|ENSG00000137804|Q9BXS6-6|NUSAP1	53.08895987439943	0.42869529153390606	6				NaN	NaN	0	NaN	764	2311	3072
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3078	13.353	NaN	14299	30	0	3912.5	0.039			+	48419	VTIPMEEPLVD	11	60	414.8810103035104	1241.6212015107312	3	414.8822326660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTIPMEEPLVD_	REV__ENSG00000128578|ENST00000249344|STRIP2;REV__nc|ENSG00000128578|Q9ULQ0-2|STRIP2	42.33807565288922	0.5259510355945483	6				NaN	NaN	0	NaN	765	2311	3072
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3079	13.354	NaN	3367.1	30	0	287.54	0.139				-1	 	0	59	487.26793226925446	486.26065580265447	1	487.2691345214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	766	2311	3072
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3094	13.387	NaN	85952	30	0	6346.3	0.199			+	39769	STKDICAGSNF	11	98	571.7606658808548	1141.5067788285096	2	571.7627563476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STKDICAGSNF_	REV__ENSG00000090905|ENST00000395799|TNRC6A;REV__nc|ENSG00000090905|Q8NDV7-2|TNRC6A;REV__nc|ENSG00000090905|Q8NDV7-5|TNRC6A;REV__nc|ENSG00000090905|Q8NDV7-6|TNRC6A;REV__TNRC6A|p.E1066Sfs*20|1|0.3|ENSG00000090905|chr16:24793488-24793488|G/-|frameshift_variant	96.0336014099291	0.0740748020614995	6				NaN	NaN	0	NaN	778	2314	3093
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3095	13.39	NaN	27652	30	0	4125.8	0.106				-1	 	0	85	515.268273579119	1028.5219942250378	2	515.27001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	779	2314	3093
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3096	13.393	NaN	4484.5	30	0	651.33	0.106	+			1543	AGDCARHQRE	10	77	600.2715189352888	1198.5284849373775	2	600.2734985351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_AGDC(Carbamidomethyl (C))ARHQRE_	ENST00000428275.1_1_X:53172386-53172590:-|nuORF	79.71258880314673	0.19796908725841375	6				NaN	NaN	0	NaN	780	2314	3093
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3097	13.394	NaN	1688.3	30	0	185.04	0.106				-1	 	0	46	430.7442873441631	859.4740217551263	2	430.7453308105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	781	2314	3093
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3098	13.396	NaN	7485.9	30	0	1147.8	0.106			+	41750	SVSLFFFKL	9	74	544.312708468874	1086.610864004548	2	544.3150024414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVSLFFFKL_	REV__ENST00000562074.2_1_16:66839813-66842571:-|nuORF	58.22992032128504	0.22837015374068087	6				NaN	NaN	0	NaN	782	2314	3093
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3099	13.398	NaN	3487.6	30	0	491.41	0.106			+	22810	KVFLEVQP	8	60	480.2826580451749	958.5507631571498	2	480.2976989746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KVFLEVQP_	REV__ENSG00000213719|ENST00000375784|CLIC1	47.91560031466742	0.6071945918984287	6				NaN	NaN	0	NaN	783	2314	3093
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3100	13.4	NaN	1078.2	30	0	130.88	0.033	+			5144	ATSVAAARK	9	49	437.7588195800781	NaN	0	437.7588195800781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATSVAAARK_	chr20:45814470-45815390|467|14.73|0.65|4.5|+|ENST00000335046|UBE2C,UBE2C;chr20:45814470-45815854|444|10.08|0.42|4.6|+|ENST00000405520|UBE2C,UBE2C;chr20:45815540-45815854|455|13.48|0.56|4.59|+|ENST00000617055|UBE2C,UBE2C;ENSG00000175063|ENST00000356455|UBE2C;nc|ENSG00000175063|O00762-3|UBE2C;nc|ENSG00000175063|O00762-4|UBE2C	35.61828744233558	0.29773779453147337	6				NaN	NaN	0	NaN	784	2314	3093
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3115	13.431	NaN	571530	30	0	82897	0.139				-1	 	0	105	475.7597981771503	949.5050434211006	2	475.7609558105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	796	2317	3114
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3116	13.434	NaN	11792	30	0	1766	0.106	+			33047	REKEKEKEL	9	83	594.8328114784899	NaN	0	594.8329467773438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_REKEKEKEL_	DHX15|p.T231Pfs*6|1|0.27|ENSG00000109606|chr4:24570664-24570664|T/-|frameshift_variant;ENSG00000109606|ENST00000336812|DHX15	123.20810148215591	0.0016355521601317592	6				NaN	NaN	0	NaN	797	2317	3114
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3117	13.436	NaN	3763.2	30	0	448.1	0.106	+			41337	SVLSSHHKK	9	61	511.7906439624113	NaN	0	511.7906494140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVLSSHHKK_	ENSG00000006831|ENST00000357103|ADIPOR2	85.16082228582465	0.053699699744190164	6				NaN	NaN	0	NaN	798	2317	3114
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3118	13.438	NaN	18500	30	0	2935.4	0.106			+	31127	QGCQMLMHT	9	64	524.7220881837756	NaN	0	524.72216796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QGCQMLMHT_	REV__PXDN|p.W821C|1|0.37|ENSG00000130508|chr2:1649317-1649317|C/A|missense_variant	30.503639358989545	0.3235605894931338	6				NaN	NaN	0	NaN	799	2317	3114
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3119	13.439	NaN	19476	30	0	1940.1	0.106			+	31116	QFSVKHMK	8	70	502.7705208663109	1003.5264887994218	2	502.77203369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QFSVKHMK_	REV__KIF5C|p.E679K|1|0.08|ENSG00000168280|chr2:148997275-148997275|G/A|missense_variant	87.69643885390035	0.28444366722805053	6				NaN	NaN	0	NaN	800	2317	3114
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3120	13.441	NaN	21353	30	0	5831.8	0.106			+	31893	QQEPMGLLG	9	64	486.7463231658595	971.478093398519	2	486.7475891113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QQEPMGLLG_	REV__ENSG00000083454|ENST00000225328|P2RX5;REV__ENST00000549063.1_1_17:3579619-3585278:-|nuORF;REV__nc|ENSG00000083454|Q93086-1|P2RX5;REV__nc|ENSG00000083454|Q93086-2|P2RX5;REV__nc|ENSG00000083454|Q93086-4|P2RX5;REV__nc|ENSG00000083454|Q93086-5|P2RX5;REV__nc|ENSG00000083454|Q93086|P2RX5	58.78195531508484	0.22376836668196862	6				NaN	NaN	0	NaN	801	2317	3114
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3121	13.443	NaN	11225	30	0	2824.3	0.035				-1	QAPMLVCGP	9	53	494.73360694674216	987.4526609602843	2	494.7350769042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C),Oxidation (M)	_QAPM(Oxidation (M))LVC(Carbamidomethyl (C))GP_	ENST00000361906.7_1_22:38617127-38617379:-|nuORF	31.954861631926434	0.5046124803899898	6				NaN	NaN	0	NaN	802	2317	3114
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3136	13.475	NaN	2131	30	0	218.79	0.214	+			26819	LVSSTGAK	8	46	381.721435546875	NaN	0	381.721435546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LVSSTGAK_	ENSG00000166828|ENST00000300061|SCNN1G;SCNN1G|p.H439Sfs*28|1|0.07|ENSG00000166828|chr16:23212696-23212697|-/CTCTG|frameshift_variant;SCNN1G|p.K626Qfs*23|1|0.1|ENSG00000166828|chr16:23215388-23215389|-/C|frameshift_variant	49.44154591367651	1.7418937515398478	6				NaN	NaN	0	NaN	814	2320	3135
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3137	13.478	NaN	3920.8	30	0	564.64	0.106			+	40273	STSQNTVLK	9	69	489.2653169057814	976.5160808783628	2	489.2720031738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STSQNTVLK_	REV__CENPJ|p.L906*|1|0.48|ENSG00000151849|chr13:24904034-24904034|A/-|frameshift_variant;REV__ENSG00000151849|ENST00000381884|CENPJ;REV__nc|ENSG00000151849|Q9HC77-2|CENPJ	95.81516180277367	0.04847050768394289	6				NaN	NaN	0	NaN	815	2320	3135
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3138	13.48	NaN	11238	30	0	1362.2	0.106				-1	 	0	67	522.3124536101415	1042.6103542870828	2	522.3142700195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	816	2320	3135
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3139	13.482	NaN	5598.1	30	0	874.48	0.106	+			12271	GAVSRPRARGA	11	44	366.54731663859354	1096.6201205159807	3	366.54852294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GAVSRPRARGA_	ENST00000398846.5_1_11:64808482-64808530:+|nuORF	32.81241826257853	0.645615689454792	6				NaN	NaN	0	NaN	817	2320	3135
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3140	13.484	NaN	12295	30	0	2025.8	0.106				-1	KICHLWIK	8	70	549.3177767068427	1096.6210004804852	2	549.31982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_KIC(Carbamidomethyl (C))HLWIK_	ENSG00000091181|ENST00000446632|IL5RA;nc|ENSG00000091181|Q01344-5|IL5RA	47.91560031466742	0.6071945918984287	6				NaN	NaN	0	NaN	818	2320	3135
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3141	13.486	NaN	7074.9	30	0	1264.7	0.034			+	21253	KLLCIEQL	8	68	480.2826580451749	958.5507631571498	2	480.2828674316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KLLCIEQL_	REV__CDK5|p.R50Q|1|0.35|ENSG00000164885|chr7:151056953-151056953|C/T|missense_variant	47.91560031466742	0.6071945918984287	6				NaN	NaN	0	NaN	819	2320	3135
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3142	13.486	NaN	3718.4	30	0	488.22	0.141				-1	EMFCLEAIV	9	55	535.7499531510427	NaN	0	535.7129516601562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_EM(Oxidation (M))FCLEAIV_	ENSG00000122335|ENST00000647468|SERAC1;ENST00000607742.5_1_6:158538757-158579378:-|nuORF;nc|ENSG00000122335|Q96JX3-2|SERAC1;SERAC1|p.H383Afs*11|1|0.03|ENSG00000122335|chr6:158120445-158120446|-/A|frameshift_variant	38.80614096846853	0.28164298475537564	6				NaN	NaN	0	NaN	820	2320	3135
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3156	13.518	NaN	15281	30	0	1661	0.214				-1	 	0	73	487.30411154703575	972.5936701608715	2	487.30535888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	831	2323	3155
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3157	13.521	NaN	15098	30	0	4283.7	0.106			+	-1	KSAMWGSPRP	10	80	566.7817090358535	1131.548865138507	2	566.7838134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_KSAM(Oxidation (M))WGSPRP_	REV__ENST00000496953.1_1_3:60676058-60676130:-|nuORF	79.71258880314673	0.19796908725841375	6				NaN	NaN	0	NaN	832	2323	3155
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3158	13.523	NaN	24768	30	0	9442.6	0.106	+			15104	GTQLCTWPAR	10	69	378.1901414767665	1131.5485950304994	3	378.1914978027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTQLCTWPAR_	ENST00000369408.9_1_6:90305719-90326311:+|nuORF;ENST00000520793.5_1_6:90305719-90326311:+|nuORF	46.45678178249821	0.4896490706773647	6				NaN	NaN	0	NaN	833	2323	3155
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3159	13.525	NaN	6380.5	30	0	991.09	0.106			+	-1	KAHRCMKQ	8	80	537.7687409692714	1073.5229290053428	2	537.7706298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_KAHRC(Carbamidomethyl (C))M(Oxidation (M))KQ_	REV__ENST00000554508.5_1_14:69367621-69387744:-|nuORF	40.5726180659479	0.6527593143185008	6				NaN	NaN	0	NaN	834	2323	3155
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3160	13.527	NaN	5312.7	30	0	2234.6	0.106				-1	GTQLCTWPAR	10	42	397.19728444469575	1188.5700239342873	3	397.1985168457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_GTQLC(Carbamidomethyl (C))TWPAR_	ENST00000369408.9_1_6:90305719-90326311:+|nuORF;ENST00000520793.5_1_6:90305719-90326311:+|nuORF	27.047317107675042	0.6589519614906109	6				NaN	NaN	0	NaN	835	2323	3155
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3161	13.529	NaN	6219.1	30	0	1518.3	0.034				-1	 	0	61	478.2447390233078	954.4749251134156	2	478.24517822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	836	2323	3155
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3162	13.529	NaN	3561.5	30	0	804.42	0.139	+			22644	KTVTMLPPG	9	58	472.26824500705635	942.5219370809127	2	472.26922607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KTVTMLPPG_	ENST00000471578.5_1_1:224734560-224753960:+|nuORF	45.9519527083369	0.35044536499095585	6				NaN	NaN	0	NaN	837	2323	3155
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3179	13.566	NaN	24001	30	0	5068.7	0.214				-1	 	0	79	445.7493690084537	889.4841850837074	2	445.7505187988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	851	2326	3178
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3180	13.569	NaN	5184.4	30	0	381.39	0.106	+			19337	KAKKEHRR	8	66	526.8251290957675	1051.6357052583348	2	526.8272094726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KAKKEHRR_	ENSG00000076650|ENST00000170564|GPATCH1;ENST00000592262.1_1_19:33604586-33621063:+|nuORF	60.97194046774394	0.49215940876911696	6				NaN	NaN	0	NaN	852	2326	3178
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3181	13.571	NaN	3019.3	30	0	542.15	0.106	+			48170	VTAAKKSQE	9	56	481.26915032651993	NaN	0	481.26910400390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTAAKKSQE_	ENSG00000183091|ENST00000397345|NEB;nc|ENSG00000183091|P20929-1|NEB;nc|ENSG00000183091|P20929-3|NEB;nc|ENSG00000183091|P20929-4|NEB;NEB|p.L4198Cfs*51|1|0.35|ENSG00000183091|chr2:151568357-151568357|G/-|frameshift_variant;NEB|p.N3442Tfs*4|1|0.2|ENSG00000183091|chr2:151618297-151618297|T/-|frameshift_variant	56.72105179125745	0.16330365735109603	6				NaN	NaN	0	NaN	853	2326	3178
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3182	13.573	NaN	1703.4	30	0	192.49	0.106			+	20742	KGTVKPERIGE	11	56	607.3485107421875	NaN	0	607.3485107421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KGTVKPERIGE_	REV__ENSG00000111641|ENST00000322166|NOP2;REV__ENST00000545200.5_1_12:6666161-6669478:-|nuORF;REV__nc|ENSG00000111641|P46087-2|NOP2;REV__nc|ENSG00000111641|P46087-4|NOP2	41.42661286455405	0.376895999158515	6				NaN	NaN	0	NaN	854	2326	3178
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3183	13.575	NaN	3890	30	0	490.3	0.106			+	50939	YHCLRPAGV	9	61	508.26086172881656	1014.5071705244331	2	508.26165771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YHCLRPAGV_	REV__ENST00000580714.1_1_17:26733612-26733768:+|nuORF	40.5726180659479	0.4135428067754104	6				NaN	NaN	0	NaN	855	2326	3178
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3184	13.577	NaN	2160.3	30	0	289.93	0.036			+	-1	LSCMGLLLSA	10	49	540.7757453922252	1079.5369378512503	2	540.7805786132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),Oxidation (M)	_LSC(Carbamidomethyl (C))M(Oxidation (M))GLLLSA_	REV__ENSG00000114395|ENST00000425346|CYB561D2	27.882242232435846	0.6521336255503853	6				NaN	NaN	0	NaN	856	2326	3178
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3185	13.577	NaN	1077.9	30	0	240.56	0.139	+			11436	FLVLASCR	8	23	454.7557373046875	NaN	0	454.7557373046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FLVLASCR_	ENST00000526269.2_1_11:128561788-128562594:-|nuORF	19.359975847455235	1.7418937515398478	6				NaN	NaN	0	NaN	857	2326	3178
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3202	13.614	NaN	6310.7	30	0	1089.7	0.214	+			22269	KTATAVAHCK	10	62	515.2773662285965	1028.540179523993	2	515.2792358398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTATAVAHCK_	chr19:39435705-39435848|468|276.17|0.0|24.72|-|0|RPS16,RPS16|1;ENSG00000105193|ENST00000251453|RPS16;ENST00000601390.1_1_19:39926180-39926535:-|nuORF	109.38876744936951	0.04981476430394371	6				NaN	NaN	0	NaN	871	2329	3201
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3203	13.618	NaN	11904	30	0	1798.8	0.106				-1	 	0	62	462.78333134168037	923.5521097501608	2	462.7846984863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	872	2329	3201
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3204	13.62	NaN	7381.3	30	0	1817.5	0.106				-1	 	0	54	377.7307782736049	753.4470036140099	2	377.7319641113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	873	2329	3201
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3205	13.622	NaN	5038.5	30	0	921.71	0.106	+			48246	VTDDSPPSKK	10	72	537.2774807889301	NaN	0	537.2777099609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTDDSPPSKK_	ENSG00000065526|ENST00000375759|SPEN;SPEN|p.A2105Lfs*33|1|0.46|ENSG00000065526|chr1:15932548-15932548|G/-|frameshift_variant;SPEN|p.A2251Qfs*102|3|0.29|ENSG00000065526|chr1:15932985-15932985|C/-|frameshift_variant;SPEN|p.G1860Efs*9|1|0.33|ENSG00000065526|chr1:15931816-15931816|G/-|frameshift_variant;SPEN|p.N2053Tfs*11|1|0.43|ENSG00000065526|chr1:15932394-15932394|A/-|frameshift_variant;SPEN|p.P2055Lfs*9|1|0.32|ENSG00000065526|chr1:15932399-15932399|C/-|frameshift_variant	98.58198989935565	0.02140828941662603	6				NaN	NaN	0	NaN	874	2329	3201
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3206	13.623	NaN	1486.4	30	0	222.37	0.106				-1	FECTQCGKSF	10	38	632.2642593479013	NaN	0	632.2639770507812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C)	_FEC(Carbamidomethyl (C))TQC(Carbamidomethyl (C))GKSF_	ENSG00000198131|ENST00000687789|ZNF544	23.52269567125451	0.42010282974921537	6				NaN	NaN	0	NaN	875	2329	3201
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3207	13.625	NaN	2340.6	30	0	649.02	0.034	+			46083	VCTFSLHL	8	48	460.23881676162534	918.4630805900507	2	460.2397766113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VCTFSLHL_	ENST00000480421.5_1_7:142982055-142983919:+|nuORF	44.53106598305862	0.628196326904373	6				NaN	NaN	0	NaN	876	2329	3201
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3208	13.626	NaN	1396.3	30	0	144.15	0.145				-1	RFLQCTRQAVP	11	50	688.3665929523956	1374.7186329715912	2	688.367919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_RFLQC(Carbamidomethyl (C))TRQAVP_	API5|p.L238F|1|0.34|ENSG00000166181|chr11:43323598-43323598|C/T|missense_variant	20.83715455343099	0.7712264395190968	6				NaN	NaN	0	NaN	877	2329	3201
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3226	13.665	NaN	94523	30	0	14552	0.15	+			5385	ATYETKESK	9	88	528.7619873944653	1055.5094218557306	2	528.763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATYETKESK_	ENSG00000165410|ENST00000298159|CFL2;ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65623404-65625570:-|nuORF;nc|ENSG00000165410|Q9Y281-3|CFL2	164.45504665044191	0.003713414289755139	6				NaN	NaN	0	NaN	892	2332	3225
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3227	13.668	NaN	24095	30	0	7032.6	0.106				-1	AVFFKVCDA	9	59	352.8439549477662	1055.5100354434985	3	352.844970703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_AVFFKVC(Carbamidomethyl (C))DA_	ZNF518A|p.L1107Ffs*8|1|0.31|ENSG00000177853|chr10:96159635-96159636|-/T|frameshift_variant	32.81241826257853	0.4965981579233955	6				NaN	NaN	0	NaN	893	2332	3225
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3228	13.67	NaN	18173	30	0	3078.3	0.106			+	30854	QEGTHTRQQ	9	75	542.7604427597277	1083.5063325862552	2	542.7623901367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QEGTHTRQQ_	REV__ZNF37A|p.K269Q|1|0.24|ENSG00000075407|chr10:38117956-38117956|A/C|missense_variant	53.08895987439943	0.27122541748218487	6				NaN	NaN	0	NaN	894	2332	3225
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3229	13.672	NaN	19347	30	0	2276.5	0.106				-1	 	0	74	551.3149352960745	1100.615317658949	2	551.3169555664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	895	2332	3225
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3230	13.673	NaN	12766	30	0	6759.7	0.106				-1	 	0	58	367.87898127353833	1100.615114420815	3	367.8801574707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	896	2332	3225
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3231	13.675	NaN	8499	30	0	1346.3	0.106	+			9796	ENYPMDSHQ	9	75	560.719757068894	1119.4249612045878	2	560.7215576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ENYPMDSHQ_	CLMN|p.D831Y|1|0.24|ENSG00000165959|chr14:95202858-95202858|C/A|missense_variant	44.377184641726394	0.36891676396732553	6				NaN	NaN	0	NaN	897	2332	3225
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3232	13.677	NaN	3605.3	30	0	943.7	0.037			+	-1	LCRGCCEGTN	10	39	577.7243612827885	NaN	0	577.724365234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))LC(Carbamidomethyl (C))RGCCEGTN_	REV__ENSG00000110799|ENST00000261405|VWF;REV__VWF|p.N2635K|1|0.31|ENSG00000110799|chr12:5953577-5953577|A/T|missense_variant	18.262085536374414	0.4201028297492154	6				NaN	NaN	0	NaN	898	2332	3225
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3247	13.709	NaN	6117.9	30	0	848.66	0.215				-1	 	0	52	381.22809290898465	760.4416328847693	2	381.2293395996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	910	2335	3246
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3248	13.712	NaN	27331	30	0	5736	0.106				-1	 	0	85	438.7596922665979	875.5048315999958	2	438.76080322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	911	2335	3246
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3249	13.714	NaN	10964	30	0	5009.6	0.106				-1	 	0	45	412.69709158644855	823.3796302396971	2	412.6983337402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	912	2335	3246
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3250	13.716	NaN	7668.7	30	0	830.14	0.106			+	45845	VALFTCISTK	10	73	541.7996698406535	1081.5847867481068	2	541.8015747070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VALFTCISTK_	REV__ENSG00000059588|ENST00000040877|TARBP1;REV__ENST00000463793.1_1_1:234546169-234556549:-|nuORF	37.81151784470057	0.569310847604193	6				NaN	NaN	0	NaN	913	2335	3246
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3251	13.718	NaN	8982.9	30	0	2359.3	0.106			+	31473	QKYNLLQQ	8	70	517.7850826411155	1033.555612349031	2	517.786865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QKYNLLQQ_	REV__ENSG00000124157|ENST00000372769|SEMG2;REV__SEMG2|p.E320Dfs*17|1|0.04|ENSG00000124157|chr20:45222591-45222592|-/CGGGTAT|frameshift_variant;REV__SEMG2|p.K303Efs*16|1|0.38|ENSG00000124157|chr20:45222537-45222538|AA/-|frameshift_variant;REV__SEMG2|p.R165Gfs*7|1|0.45|ENSG00000124157|chr20:45222120-45222120|A/-|frameshift_variant;REV__SEMG2|p.R165Kfs*9|1|0.08|ENSG00000124157|chr20:45222119-45222120|-/A|frameshift_variant	76.7741389293348	0.3504530765139327	6				NaN	NaN	0	NaN	914	2335	3246
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3252	13.72	NaN	5744	30	0	1426.4	0.034				-1	RHVVCALS	8	55	471.2535705566406	NaN	0	471.2535705566406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_RHVVC(Carbamidomethyl (C))ALS_	ENSG00000100416|ENST00000645190|TRMU;nc|ENSG00000100416|O75648-2|TRMU;nc|ENSG00000100416|O75648-5|TRMU	31.954861631926434	1.7418937515398478	6				NaN	NaN	0	NaN	915	2335	3246
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3253	13.72	NaN	5520.1	30	0	2959	0.14	+			9762	ENLINHQR	8	48	512.2693563206211	1022.5241597080422	2	512.2704467773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ENLINHQR_	ENSG00000096654|ENST00000683788|ZNF184	31.954861631926434	0.7126016770032289	6				NaN	NaN	0	NaN	916	2335	3246
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3271	13.76	NaN	10746	30	0	1537.1	0.214				-1	KSYFMSKEI	9	81	574.7868308811325	1147.5591088290648	2	574.7887573242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_KSYFM(Oxidation (M))SKEI_	ENST00000254636.9_1_2:86371331-86371394:-|nuORF	56.72105179125745	0.24094814563026265	6				NaN	NaN	0	NaN	931	2338	3270
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3272	13.763	NaN	50149	30	0	5650.3	0.106	+			3913	ATARPRPVK	9	91	332.5406350641309	994.6000757925929	3	332.5417175292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATARPRPVK_	ENSG00000170892|ENST00000396388|TSEN34	69.6276240434122	0.14239879520340665	6				NaN	NaN	0	NaN	932	2338	3270
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3273	13.765	NaN	4797.8	30	0	833.96	0.106				-1	 	0	57	465.7830410486104	929.5515291640208	2	465.7843017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	933	2338	3270
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3274	13.767	NaN	6007.3	30	0	887.98	0.106	+			23746	LCALSWAKK	9	58	510.28804846226643	1018.5615439913329	2	510.290283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LCALSWAKK_	nc|ENSG00000165105|Q8IZ41-2|RASEF	49.44154591367651	0.3095138337212152	6				NaN	NaN	0	NaN	934	2338	3270
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3275	13.769	NaN	3869.4	30	0	1258	0.106			+	-1	KRGMAIQK	8	59	474.27843829201987	946.5423236508398	2	474.2793884277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_KRGM(Oxidation (M))AIQK_	REV__ENSG00000008256|ENST00000350796|CYTH3;REV__nc|ENSG00000008256|O43739|CYTH3	65.80317337860623	0.44433089765398776	6				NaN	NaN	0	NaN	935	2338	3270
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3276	13.771	NaN	2378.8	30	0	470.8	0.033				-1	QQGAPGCAL	9	44	451.213801045068	NaN	0	450.739990234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_QQGAPGC(Carbamidomethyl (C))AL_	ENSG00000197406|ENST00000510508|DIO3	33.51558372728122	0.30835390848773375	6				NaN	NaN	0	NaN	936	2338	3270
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3277	13.771	NaN	2695.8	30	0	305.88	0.141			+	20134	KEKNETKLK	9	60	559.3310942143547	1116.6476354955093	2	559.3328247070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KEKNETKLK_	REV__ABCA6|p.D1552Gfs*18|1|0.04|ENSG00000154262|chr17:69081107-69081108|-/C|frameshift_variant;REV__ABCA6|p.I1144Mfs*6|1|0.11|ENSG00000154262|chr17:69091239-69091240|-/CTTTTCCC|frameshift_variant;REV__ENSG00000154262|ENST00000284425|ABCA6;REV__ENST00000589803.5_1_17:67102167-67114054:-|nuORF	44.377184641726394	0.36891676396732553	6				NaN	NaN	0	NaN	937	2338	3270
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3295	13.811	NaN	5585.3	30	0	598.23	0.214				-1	 	0	71	516.8225946626471	1031.6306363920942	2	516.8242797851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	952	2341	3294
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3296	13.814	NaN	7896.9	30	0	1056.8	0.106			+	-1	LKILEIWSSC	10	81	624.8363297413082	1247.6581065494163	2	624.83837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LKILEIWSSC(Carbamidomethyl (C))_	REV__ENSG00000111731|ENST00000446597|C2CD5;REV__nc|ENSG00000111731|Q86YS7-2|C2CD5;REV__nc|ENSG00000111731|Q86YS7-4|C2CD5;REV__nc|ENSG00000111731|Q86YS7-5|C2CD5	36.446750945000026	0.5818864909973037	6				NaN	NaN	0	NaN	953	2341	3294
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3297	13.816	NaN	4194	30	0	1619.7	0.106			+	11037	FELRMSILT	9	52	555.3065185546875	NaN	0	555.3065185546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FELRMSILT_	REV__DOCK8|p.E1615Dfs*7|1|0.05|ENSG00000107099|chr9:433933-433934|-/C|frameshift_variant;REV__DOCK8|p.M1114Yfs*4|1|0.4|ENSG00000107099|chr9:405014-405015|-/T|frameshift_variant;REV__ENSG00000107099|ENST00000432829|DOCK8;REV__nc|ENSG00000107099|Q8NF50-2|DOCK8;REV__nc|ENSG00000107099|Q8NF50-3|DOCK8;REV__nc|ENSG00000107099|Q8NF50-4|DOCK8	27.882242232435846	0.3367954786602879	6				NaN	NaN	0	NaN	954	2341	3294
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3298	13.818	NaN	2551.5	30	0	412.2	0.106	+			40179	STQSRDSINK	10	56	568.2872355339892	1134.5599181347784	2	568.2891845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STQSRDSINK_	ENSG00000106628|ENST00000610533|POLD2;ENST00000511220.1_1_5:92603510-92603882:+|nuORF	45.02220120713402	0.5028680121232791	6				NaN	NaN	0	NaN	955	2341	3294
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3299	13.82	NaN	3051.7	30	0	815.97	0.106			+	41669	SVRPTFWK	8	50	340.86150605295046	NaN	0	340.8614196777344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVRPTFWK_	REV__ENSG00000124702|ENST00000326974|KLHDC3;REV__KLHDC3|p.C134Lfs*3|1|0.28|ENSG00000124702|chr6:43017922-43017922|G/-|frameshift_variant	38.80614096846853	1.7418937515398478	6				NaN	NaN	0	NaN	956	2341	3294
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3300	13.822	NaN	5834.5	30	0	1287.3	0.035				-1	 	0	53	492.81200999025464	983.6094670473093	2	492.81365966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	957	2341	3294
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3301	13.822	NaN	2397.8	30	0	527.94	0.142	+			19741	KDVHWPSRE	9	55	577.2914428710938	NaN	0	577.2914428710938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KDVHWPSRE_	ENST00000597953.1_1_3:142719968-142720172:-|nuORF	41.42661286455405	0.26577678759562784	6				NaN	NaN	0	NaN	958	2341	3294
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3317	13.856	NaN	5372.4	30	0	885.08	0.214				-1	EIMSIISK	8	59	468.757539474561	935.500526015922	2	468.7587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_EIM(Oxidation (M))SIISK_	ENSG00000188738|ENST00000424728|FSIP2;FSIP2|p.D5579Mfs*10|1|0.09|ENSG00000188738|chr2:185806029-185806029|A/-|frameshift_variant;FSIP2|p.K6152Rfs*27|1|0.43|ENSG00000188738|chr2:185807758-185807758|A/-|frameshift_variant;FSIP2|p.K6528Nfs*5|1|0.33|ENSG00000188738|chr2:185808884-185808884|A/-|frameshift_variant;FSIP2|p.V5734Yfs*24|2|0.23|ENSG00000188738|chr2:185806499-185806499|A/-|frameshift_variant;FSIP2|p.V6322*|1|0.42|ENSG00000188738|chr2:185808265-185808265|A/-|frameshift_variant	51.33545320467046	0.5859736979383976	6				NaN	NaN	0	NaN	971	2344	3316
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3318	13.86	NaN	16972	30	0	3092.8	0.106				-1	 	0	81	484.7782987501653	967.5420445671306	2	484.77947998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	972	2344	3316
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3319	13.862	NaN	10195	30	0	2103.8	0.106			+	27900	MTSGMGMGTQ	10	64	500.69625243547114	999.3779519377423	2	500.69842529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MTSGMGMGTQ_	REV__ENSG00000197901|ENST00000360421|SLC22A6;REV__nc|ENSG00000197901|Q4U2R8|SLC22A6	64.20726635412375	0.3275756395432415	6				NaN	NaN	0	NaN	973	2344	3316
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3320	13.864	NaN	6744.6	30	0	974.66	0.106			+	27589	MPKVVSDLS	9	69	488.2632032322758	974.5118535313517	2	488.26422119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MPKVVSDLS_	REV__ENSG00000109927|ENST00000392793|TECTA;REV__TECTA|p.D2032Gfs*22|1|0.13|ENSG00000109927|chr11:121187922-121187923|-/G|frameshift_variant	38.80614096846853	0.43426287593479557	6				NaN	NaN	0	NaN	974	2344	3316
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3321	13.866	NaN	7936.4	30	0	2263.1	0.106				-1	 	0	56	420.2208239726549	838.4270950121098	2	420.221923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	975	2344	3316
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3322	13.868	NaN	17882	30	0	2875.7	0.035				-1	 	0	71	328.8771595790575	983.6096493373725	3	328.8781433105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	976	2344	3316
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3323	13.868	NaN	5637.2	30	0	1018.8	0.14				-1	KFVPASSCQ	9	62	512.2498380219611	1022.4851231107222	2	512.2513427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_KFVPASSC(Carbamidomethyl (C))Q_	ENSG00000007908|ENST00000333360|SELE;SELE|p.K586N|1|0.49|ENSG00000007908|chr1:169725924-169725924|C/A|missense_variant	42.396135135203025	0.392153681582562	6				NaN	NaN	0	NaN	977	2344	3316
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3341	13.908	NaN	55296	30	0	9582.6	0.214				-1	LIPMLQKQ	8	93	329.5284621046847	985.5635569142541	3	329.52947998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LIPM(Oxidation (M))LQKQ_	ENSG00000118276|ENST00000306851|B4GALT6	38.80614096846853	0.6637206697844082	6				NaN	NaN	0	NaN	992	2347	3340
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3342	13.911	NaN	13169	30	0	2793.6	0.106			+	44197	TREQRQRR	8	75	565.3182018179899	1128.6218507027797	2	565.320068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TREQRQRR_	REV__ENSG00000178928|ENST00000698655|TPRX1;REV__nc|ENSG00000259009|P0DV77|TPRX2	73.97473282117947	0.3737790450121076	6				NaN	NaN	0	NaN	993	2347	3340
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3343	13.913	NaN	3635.1	30	0	1648.2	0.106				-1	 	0	31	433.7361122670618	865.4576716009236	2	433.73712158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	994	2347	3340
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3344	13.915	NaN	3108.6	30	0	372.59	0.106				-1	VVESGCSIK	9	62	489.7495332648731	NaN	0	489.74957275390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_VVESGC(Carbamidomethyl (C))SIK_	tr|U7SIN9|U7SIN9_FUSNUV-typeprotonATPasesubunitEOS=FusobacteriumnucleatumCTI-5OX=1316586GN=atpEPE=3SV=1	60.97194046774394	0.14517358171632622	6				NaN	NaN	0	NaN	995	2347	3340
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3345	13.917	NaN	2908	30	0	413.73	0.106				-1	KSYFMSKEI	9	55	574.7868308811325	1147.5591088290648	2	575.3180541992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_KSYFM(Oxidation (M))SKEI_	ENST00000254636.9_1_2:86371331-86371394:-|nuORF	24.519189625965996	0.574102787014149	6				NaN	NaN	0	NaN	996	2347	3340
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3346	13.919	NaN	1345.9	30	0	745.07	0.032			+	-1	SSKMIIAG	8	31	411.7228565804779	821.4311602277559	2	411.7240905761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_SSKM(Oxidation (M))IIAG_	REV__ENSG00000134538|ENST00000256958|SLCO1B1	28.2542754592877	0.7411748056684583	6				NaN	NaN	0	NaN	997	2347	3340
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3347	13.919	NaN	2084.1	30	0	273.21	0.141			+	19648	KDLAGPSLVLV	11	42	556.3389282226562	NaN	0	556.3389282226562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KDLAGPSLVLV_	REV__ENSG00000004139|ENST00000585482|SARM1;REV__ENST00000379061.8_1_17:26712241-26725107:+|nuORF;REV__nc|ENSG00000004139|Q6SZW1-2|SARM1	13.507942900623993	0.456735970842152	6				NaN	NaN	0	NaN	998	2347	3340
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3363	13.954	NaN	84665	30	0	7411.6	0.214				-1	 	0	127	339.87214064908494	1016.5945925474548	3	339.8731384277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1011	2350	3362
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3364	13.958	NaN	2798.4	30	0	482.85	0.106				-1	 	0	49	362.85110313348133	1085.531480000644	3	362.852294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1012	2350	3362
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3365	13.96	NaN	10804	30	0	2797.1	0.106				-1	KRMGNPCTKH	10	75	594.2920341359788	1186.5695153387576	2	594.2940673828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_KRM(Oxidation (M))GNPCTKH_	ENST00000315183.11_2_16:24801717-24801792:+|nuORF	47.657333605630114	0.47858658696240314	6				NaN	NaN	0	NaN	1013	2350	3362
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3366	13.962	NaN	4784.6	30	0	1375.8	0.106			+	9648	ELSFEKKK	8	58	504.7927060280619	NaN	0	504.7926330566406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ELSFEKKK_	REV__ENSG00000183530|ENST00000327423|PRR14L;REV__nc|ENSG00000183530|Q5THK1-4|PRR14L	63.30626980617807	1.7418937515398478	6				NaN	NaN	0	NaN	1014	2350	3362
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3367	13.964	NaN	2423.2	30	0	808.88	0.106				-1	 	0	50	413.77772726751033	825.5409016018207	2	413.77899169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1015	2350	3362
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3368	13.965	NaN	7963.6	30	0	2743.6	0.035			+	-1	ALRAQPGMR	9	60	521.2832669508055	1040.5519809684108	2	521.2852172851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))ALRAQPGMR_	REV__ENST00000372748.7_1_1:40773379-40775829:-|nuORF	24.20275056022122	0.577060078256802	6				NaN	NaN	0	NaN	1016	2350	3362
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3369	13.966	NaN	3626.5	30	0	537.19	0.139	+			31220	QGTPSAPAAAT	11	60	486.24226599927295	970.4699790653459	2	486.2431335449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QGTPSAPAAAT_	ENSG00000112305|ENST00000370455|SMAP1;nc|ENSG00000112305|Q8IYB5-2|SMAP1;nc|ENSG00000112305|Q8IYB5-3|SMAP1	45.02220120713402	0.4892240028381124	6				NaN	NaN	0	NaN	1017	2350	3362
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3386	14.003	NaN	45092	30	0	5881.6	0.214				-1	 	0	84	461.76243847168473	921.5103240101695	2	461.7634582519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1031	2353	3385
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3387	14.007	NaN	12117	30	0	2798.5	0.106			+	23361	KYVDTNVVG	9	73	497.7643645726542	993.5141762121084	2	497.765869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KYVDTNVVG_	REV__ENSG00000169084|ENST00000334651|DHRSX	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	1032	2353	3385
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3388	14.009	NaN	13753	30	0	3002.5	0.106	+			49297	VVQKKIAEK	9	68	521.8332524672538	1041.6519520013076	2	521.8346557617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVQKKIAEK_	ENSG00000171045|ENST00000524325|TSNARE1;ENST00000518928.1_1_8:143381726-143407541:-|nuORF;nc|ENSG00000171045|Q96NA8-2|TSNARE1	115.49404669440601	0.023927554121326553	6				NaN	NaN	0	NaN	1033	2353	3385
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3389	14.01	NaN	4232.2	30	0	1021.3	0.106				-1	 	0	44	396.72603480546303	791.4375166777261	2	396.7272644042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1034	2353	3385
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3390	14.012	NaN	9920.2	30	0	4032.8	0.106				-1	GLHCRAPLA	9	64	332.17894499143836	993.515005574515	3	332.1798400878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_GLHC(Carbamidomethyl (C))RAPLA_	HHIPL2|p.W19Lfs*41|1|0.25|ENSG00000143512|chr1:222547990-222547991|-/G|frameshift_variant	34.172542307311794	0.4838870758800184	6				NaN	NaN	0	NaN	1035	2353	3385
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3391	14.014	NaN	2652.6	30	0	726.11	0.038	+			32306	QTQGLCPEIPD	11	54	600.7828286878859	1199.5511044425716	2	600.7846069335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QTQGLCPEIPD_	ENSG00000135124|ENST00000337233|P2RX4;ENST00000499638.6_1_12:121647946-121660004:+|nuORF;ENST00000541187.5_1_12:121647975-121666346:+|nuORF;nc|ENSG00000135124|Q99571-2|P2RX4;nc|ENSG00000135124|Q99571-3|P2RX4;P2RX4|p.T223Qfs*13|1|0.34|ENSG00000135124|chr12:121228783-121228783|A/-|frameshift_variant	49.536043120802724	0.4274608637932522	6				NaN	NaN	0	NaN	1036	2353	3385
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3392	14.015	NaN	2328.8	30	0	269.5	0.141			+	47982	VSPIETLRR	9	56	535.8197631835938	NaN	0	535.8197631835938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VSPIETLRR_	REV__CMYA5|p.P4051Nfs*8|1|0.05|ENSG00000164309|chr5:79799555-79799561|AACCTGG/-|frameshift_variant;REV__ENSG00000164309|ENST00000446378|CMYA5;REV__ENST00000506603.5_1_5:79058805-79095436:+|nuORF	56.72105179125745	0.16330365735109603	6				NaN	NaN	0	NaN	1037	2353	3385
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3408	14.05	NaN	14420	30	0	1492.4	0.214			+	36804	SIDQVMKWA	9	81	539.2737628896997	1076.5329728461993	2	539.2755126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SIDQVMKWA_	REV__CACHD1|p.T598I|1|0.24|ENSG00000158966|chr1:64658868-64658868|C/T|missense_variant	93.19546047674547	0.05585629608842056	6				NaN	NaN	0	NaN	1050	2356	3407
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3409	14.053	NaN	28637	30	0	3419.9	0.106	+			25005	LLFWATFT	8	79	520.7765086152075	1039.538464297215	2	520.7784423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LLFWATFT_	ENST00000339594.8_1_7:72891859-72891937:-|nuORF	83.28718786952967	0.2977916691876266	6				NaN	NaN	0	NaN	1051	2356	3407
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3410	14.055	NaN	11255	30	0	1546.3	0.106			+	39573	STGLMLFL	8	86	441.24446920412123	880.4743854750425	2	441.2455749511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STGLMLFL_	REV__tr|U7T3J3|U7T3J3_FUSNUAutotransporterdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00684PE=4SV=1	46.76643321282427	0.6143254112625767	6				NaN	NaN	0	NaN	1052	2356	3407
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3411	14.057	NaN	8937.1	30	0	1663.1	0.106				-1	 	0	63	341.1864234469048	680.3582939606097	2	341.1876525878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1053	2356	3407
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3412	14.059	NaN	35458	30	0	5415.3	0.106	+			28551	NITSKSMFL	9	96	347.51990301917806	1039.5378796577343	3	347.5210876464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NITSKSMFL_	HMCN1|p.V1339Gfs*22|1|0.42|ENSG00000143341|chr1:186000186-186000186|T/-|frameshift_variant	44.116797842482775	0.37197099687881774	6				NaN	NaN	0	NaN	1054	2356	3407
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3413	14.061	NaN	42348	30	0	5667	0.035				-1	 	0	95	517.7940426323863	1033.5735323315726	2	517.7960815429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1055	2356	3407
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3414	14.061	NaN	19438	30	0	4115.7	0.14	+			20905	KISWQKSQ	8	77	502.7800265693753	1003.5455002055506	2	502.7822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KISWQKSQ_	L1PA8_dup4178|chr8:94121319-94127043:-|4.057818296907117|0.2856926403965029|3.83|481.0|93|2|sense	90.60085204095205	0.2756512185673585	6				NaN	NaN	0	NaN	1056	2356	3407
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3430	14.097	NaN	17462	30	0	1814.4	0.214				-1	 	0	82	439.74933210014785	877.4841112670957	2	439.7504577636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1069	2359	3429
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3431	14.1	NaN	10817	30	0	991.26	0.106	+			49221	VVNDAGRPK	9	79	478.268320289261	954.522087645322	2	478.2691650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVNDAGRPK_	ENSG00000109971|ENST00000534624|HSPA8;ENST00000508840.1_1_8:30095113-30095479:+|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;HSPA8|p.K569Dfs*6|1|0.3|ENSG00000109971|chr11:123058302-123058303|TC/-|frameshift_variant;nc|ENSG00000109971|P11142-2|HSPA8	79.71258880314673	0.09879134589249085	6				NaN	NaN	0	NaN	1070	2359	3429
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3432	14.102	NaN	11618	30	0	2713.7	0.106	+			21455	KNFNRALE	8	78	496.2714232754048	990.5282936176096	2	496.76318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KNFNRALE_	ENSG00000139324|ENST00000266712|TMTC3;nc|ENSG00000139324|Q6ZXV5|TMTC3;TMTC3|p.C759Mfs*3|1|0.29|ENSG00000139324|chr12:88195171-88195172|-/A|frameshift_variant;TMTC3|p.K758Nfs*31|1|0.16|ENSG00000139324|chr12:88195172-88195172|A/-|frameshift_variant	82.30502934623384	0.30436709589983096	6				NaN	NaN	0	NaN	1071	2359	3429
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3433	14.104	NaN	5464.9	30	0	1467.5	0.106				-1	 	0	60	450.3040683944946	898.5935838557892	2	450.3052062988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1072	2359	3429
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3434	14.106	NaN	7316.8	30	0	919.02	0.106			+	8608	ECLGECHF	8	51	469.1810892639599	936.3476255947198	2	469.18218994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ECLGECHF_	REV__ENSG00000125965|ENST00000374369|GDF5	20.481830146152948	0.8005983782650069	6				NaN	NaN	0	NaN	1073	2359	3429
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3435	14.108	NaN	3067	30	0	365.61	0.033				-1	 	0	56	442.76210041492453	883.5096478966491	2	442.7632141113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1074	2359	3429
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3436	14.108	NaN	4111.9	30	0	1432.3	0.142	+			19814	KEDEKKQEL	9	62	573.8023130582336	1145.5900731832671	2	573.803955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KEDEKKQEL_	ENSG00000138640|ENST00000264344|FAM13A;ENST00000508360.5_1_4:89653076-89671014:-|nuORF;ENST00000511573.5_1_4:89649686-89680064:-|nuORF;nc|ENSG00000138640|O94988-1|FAM13A;nc|ENSG00000138640|O94988-3|FAM13A;nc|ENSG00000138640|O94988-5|FAM13A;nc|ENSG00000138640|O94988-6|FAM13A	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	1075	2359	3429
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3454	14.148	NaN	39916	30	0	11360	0.214	+			45841	VAKYLMVK	8	84	484.28615153043995	966.5577501276799	2	484.2873840332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_VAKYLM(Oxidation (M))VK_	ENSG00000074755|ENST00000381638|ZZEF1;ENST00000574474.1_1_17:3979912-4046255:-|nuORF;nc|ENSG00000074755|O43149-3|ZZEF1;ZZEF1|p.K2387Sfs*40|1|0.38|ENSG00000074755|chr17:4022761-4022761|T/-|frameshift_variant	60.29395666154354	0.49887135096048313	6				NaN	NaN	0	NaN	1090	2362	3453
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3455	14.151	NaN	19081	30	0	3174.4	0.106	+			40170	STQSKVMNK	9	90	511.7664104611787	1021.5182679891574	2	511.76837158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STQSKVMNK_	ENSG00000165113|ENST00000376371|GKAP1;nc|ENSG00000165113|Q5VSY0-2|GKAP1	155.5846463517096	0.005567437401040498	6				NaN	NaN	0	NaN	1091	2362	3453
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3456	14.153	NaN	41316	30	0	8695.8	0.106			+	35218	SAKWPTRPQ	9	94	535.7908414778867	1069.5671300225733	2	535.7926635742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAKWPTRPQ_	REV__ENST00000372409.7_1_20:44572315-44574382:+|nuORF	85.86182877749512	0.07653218437724067	6				NaN	NaN	0	NaN	1092	2362	3453
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3457	14.155	NaN	104020	30	0	82003	0.106			+	43130	TERRKQNEK	9	65	396.88627495874516	1187.6369954764355	3	396.8874206542969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TERRKQNEK_	REV__ENSG00000131504|ENST00000389054|DIAPH1;REV__nc|ENSG00000131504|O60610-2|DIAPH1;REV__nc|ENSG00000131504|O60610-3|DIAPH1	41.42661286455405	0.403525789677298	6				NaN	NaN	0	NaN	1093	2362	3453
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3458	14.157	NaN	35497	30	0	14875	0.106			+	35219	SAKWPTRPQ	9	76	357.52937279048626	1069.5662889716589	3	357.5305480957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SAKWPTRPQ_	REV__ENST00000372409.7_1_20:44572315-44574382:+|nuORF	44.377184641726394	0.36891676396732553	6				NaN	NaN	0	NaN	1094	2362	3453
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3459	14.159	NaN	43569	30	0	17394	0.038			+	16763	HLYLMGTIIQ	10	85	594.8261114473562	1187.6376699615123	2	594.8279418945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HLYLMGTIIQ_	REV__ENSG00000142731|ENST00000270861|PLK4;REV__nc|ENSG00000142731|O00444-2|PLK4;REV__nc|ENSG00000142731|O00444-3|PLK4	90.60085204095205	0.12763388345653318	6				NaN	NaN	0	NaN	1095	2362	3453
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3460	14.159	NaN	7764.1	30	0	2762.7	0.143	+			45918	VAQPVPLLM	9	43	323.1931962411812	966.5577593237438	3	323.1941833496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VAQPVPLLM_	ENSG00000144488|ENST00000343063|ESPNL;ESPNL|p.V650Cfs*35|2|0.42|ENSG00000144488|chr2:238130657-238130657|G/-|frameshift_variant	26.79610172149135	0.5528238334041078	6				NaN	NaN	0	NaN	1096	2362	3453
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3478	14.199	NaN	24334	30	0	3412.1	0.214				-1	 	0	96	495.7808713176591	989.5471897021182	2	495.78228759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1111	2365	3477
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3479	14.202	NaN	25761	30	0	4435.7	0.106	+			43632	TIPLYVVKQ	9	80	530.8245065458487	1059.6344601584974	2	530.8275146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TIPLYVVKQ_	ENSG00000164251|ENST00000296677|F2RL1;nc|ENSG00000164251|P55085|F2RL1	71.29570347882199	0.13518600952103718	6				NaN	NaN	0	NaN	1112	2365	3477
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3480	14.204	NaN	81571	30	0	32816	0.106				-1	 	0	82	337.1775874149049	1008.5109328449148	3	337.1785888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1113	2365	3477
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3481	14.206	NaN	13919	30	0	2620.4	0.106	+			16340	HEKTEDNKL	9	72	557.2805645549703	NaN	0	557.280517578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HEKTEDNKL_	ENSG00000123200|ENST00000679008|ZC3H13;nc|ENSG00000123200|Q5T200|ZC3H13	134.7655990226056	0.00014292611696254572	6				NaN	NaN	0	NaN	1114	2365	3477
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3482	14.208	NaN	7124.4	30	0	646.19	0.106	+			57	AAAQNAIKK	9	70	457.77430698156	NaN	0	457.7742614746094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AAAQNAIKK_	ENSG00000137076|ENST00000314888|TLN1;ENSG00000171914|ENST00000636159|TLN2;nc|ENSG00000137076|Q9Y490-2|TLN1;TLN1|p.P1628Rfs*20|1|0.44|ENSG00000137076|chr9:35707144-35707144|G/-|frameshift_variant	106.41520541750704	0.01293449659060185	6				NaN	NaN	0	NaN	1115	2365	3477
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3483	14.21	NaN	17681	30	0	1357.1	0.035	+			13899	GRGSKVASGTK	11	84	524.2991086473417	1046.5836643614832	2	524.301025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GRGSKVASGTK_	ENST00000520319.1_1_17:41960558-41984643:-|nuORF	57.885488727062594	0.3423300441360433	6				NaN	NaN	0	NaN	1116	2365	3477
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3484	14.21	NaN	2959.7	30	0	279.86	0.143	+			30758	QDPGTRRSRAG	11	62	600.8126931295469	1199.6108333258937	2	600.8148803710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QDPGTRRSRAG_	ENST00000468535.5_1_7:1586590-1589169:-|nuORF	56.632244143249146	0.3535169766007185	6				NaN	NaN	0	NaN	1117	2365	3477
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3502	14.25	NaN	8390.8	30	0	1237.3	0.214	+			34214	RTDTASRLK	9	68	349.866828566979	1046.578656301137	3	349.86834716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTDTASRLK_	ENSG00000054654|ENST00000555002|SYNE2;ENST00000394768.6_2_14:64542710-64692241:+|nuORF;ENST00000554805.6_2_14:64676062-64692241:+|nuORF;ENST00000555022.5_2_14:64671104-64692241:+|nuORF;nc|ENSG00000054654|Q8WXH0-13|SYNE2;nc|ENSG00000054654|Q8WXH0-3|SYNE2;nc|ENSG00000054654|Q8WXH0-4|SYNE2;nc|ENSG00000054654|Q8WXH0-7|SYNE2;nc|ENSG00000054654|Q8WXH0|SYNE2;SYNE2|p.S6651Rfs*83|1|0.29|ENSG00000054654|chr14:64220596-64220597|-/G|frameshift_variant	76.16968421966216	0.11411088698345859	6				NaN	NaN	0	NaN	1132	2368	3501
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3503	14.253	NaN	7392	30	0	1181.3	0.106	+			13227	GIIAARCAIS	10	72	487.7774050175462	973.5402571018924	2	487.7798767089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GIIAARCAIS_	AGL|p.K1407Nfs*8|1|0.39|ENSG00000162688|chr1:99915441-99915441|A/-|frameshift_variant;AGL|p.N1304Ifs*10|1|0.38|ENSG00000162688|chr1:99912472-99912472|A/-|frameshift_variant;AGL|p.N1304Kfs*7|1|0.38|ENSG00000162688|chr1:99912471-99912472|-/A|frameshift_variant;ENSG00000162688|ENST00000361915|AGL;nc|ENSG00000162688|P35573-2|AGL;nc|ENSG00000162688|P35573-3|AGL	79.45101966838831	0.2001060845487004	6				NaN	NaN	0	NaN	1133	2368	3501
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3504	14.255	NaN	4642.5	30	0	1327.6	0.106				-1	 	0	59	420.2208239726549	838.4270950121098	2	420.2221984863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1134	2368	3501
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3505	14.257	NaN	7426.3	30	0	1817.7	0.106			+	-1	IGRSCIRL	8	61	325.5232240305772	973.5478426919316	3	325.5243835449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_IGRSC(Carbamidomethyl (C))IRL_	REV__ENST00000381359.5_2_15:44086395-44086440:+|nuORF	38.80614096846853	0.6637206697844082	6				NaN	NaN	0	NaN	1135	2368	3501
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3506	14.259	NaN	3086.7	30	0	301.27	0.106	+			31973	QQVTRSVN	8	55	466.2532543182494	930.4919557032988	2	466.25469970703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QQVTRSVN_	CKAP5|p.I1665T|1|0.24|ENSG00000175216|chr11:46753373-46753373|A/G|missense_variant	74.25504064058377	0.37144338840759816	6				NaN	NaN	0	NaN	1136	2368	3501
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3507	14.261	NaN	4984.5	30	0	1227.7	0.034	+			12854	GEPRGRSR	8	57	457.7494048930847	913.4842568529695	2	457.7503662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GEPRGRSR_	ENSG00000263465|ENST00000587424|SRSF8;nc|ENSG00000263465|Q9BRL6-2|SRSF8	44.116797842482775	0.6307669463330267	6				NaN	NaN	0	NaN	1137	2368	3501
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3508	14.261	NaN	7977.8	30	0	3156.2	0.142				-1	 	0	68	592.2880149180352	591.2807384514351	1	592.28955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1138	2368	3501
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3526	14.301	NaN	20318	30	0	2852.7	0.214	+			39386	STDKQTCLK	9	82	540.7723105584869	NaN	0	540.7723999023438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_STDKQTC(Carbamidomethyl (C))LK_	ENSG00000198788|ENST00000675028|MUC2;nc|ENSG00000198788|Q02817|MUC2	155.5846463517096	0.006928971805488876	6				NaN	NaN	0	NaN	1153	2371	3525
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3527	14.304	NaN	31226	30	0	19857	0.106			+	-1	SVLMEYVR	8	69	338.1763472664293	1011.5072123994878	3	338.1773681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_SVLM(Oxidation (M))EYVR_	REV__ENSG00000103197|ENST00000219476|TSC2;REV__nc|ENSG00000103197|P49815-2|TSC2;REV__nc|ENSG00000103197|P49815-3|TSC2;REV__nc|ENSG00000103197|P49815-4|TSC2;REV__nc|ENSG00000103197|P49815-5|TSC2;REV__nc|ENSG00000103197|P49815-6|TSC2;REV__nc|ENSG00000103197|P49815-7|TSC2;REV__TSC2|p.S1427Vfs*49|1|0.21|ENSG00000103197|chr16:2084499-2084499|A/-|frameshift_variant	58.78195531508484	0.5138399468736706	6				NaN	NaN	0	NaN	1154	2371	3525
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3528	14.306	NaN	11237	30	0	4115.1	0.106				-1	 	0	63	332.19698016111914	993.5691110835575	3	332.1979675292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1155	2371	3525
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3529	14.308	NaN	17364	30	0	2192.4	0.106				-1	KDCYSLALSK	10	78	592.8031609842798	1183.5917690353594	2	592.8049926757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_KDC(Carbamidomethyl (C))YSLALSK_	ENSG00000162687|ENST00000294725|KCNT2;ENST00000498426.5_1_1:196197356-196286329:-|nuORF;ENST00000610076.1_1_1:196227273-196577439:-|nuORF;nc|ENSG00000162687|Q6UVM3-2|KCNT2;nc|ENSG00000162687|Q6UVM3-3|KCNT2;nc|ENSG00000162687|Q6UVM3-4|KCNT2	93.5975768576971	0.11047702954938905	6				NaN	NaN	0	NaN	1156	2371	3525
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3530	14.31	NaN	12520	30	0	2816.1	0.106			+	31660	QNEFSNGIQ	9	69	518.7400094727712	1035.4654660123424	2	518.7418212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QNEFSNGIQ_	REV__CPA5|p.W384Lfs*4|1|0.1|ENSG00000158525|chr7:130368434-130368435|-/C|frameshift_variant;REV__ENSG00000158525|ENST00000474905|CPA5;REV__ENST00000495736.1_1_7:129986419-130007427:+|nuORF;REV__nc|ENSG00000158525|Q8WXQ8-2|CPA5;REV__nc|ENSG00000158525|Q8WXQ8-3|CPA5	74.25504064058377	0.12238981753128622	6				NaN	NaN	0	NaN	1157	2371	3525
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3531	14.312	NaN	2706.9	30	0	351.96	0.037	+			18595	ISQIQKFFF	9	48	579.3236694335938	NaN	0	579.3236694335938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ISQIQKFFF_	BTBD16|p.F302Lfs*15|1|0.32|ENSG00000138152|chr10:122307298-122307298|T/-|frameshift_variant;BTBD16|p.G367Afs*6|1|0.08|ENSG00000138152|chr10:122332445-122332445|G/-|frameshift_variant;ENSG00000138152|ENST00000260723|BTBD16;nc|ENSG00000138152|Q32M84-2|BTBD16	24.519189625965996	0.35377483217337163	6				NaN	NaN	0	NaN	1158	2371	3525
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3532	14.313	NaN	4101.3	30	0	1105.6	0.14	+			22616	KTTQDVKK	8	64	474.27843829201987	946.5423236508398	2	474.2797546386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KTTQDVKK_	CCNE2|p.R42Efs*38|1|0.07|ENSG00000175305|chr8:94893932-94893932|T/-|frameshift_variant;ENSG00000175305|ENST00000308108|CCNE2;ENST00000517487.5_1_8:95906073-95906449:-|nuORF;nc|ENSG00000175305|O96020-2|CCNE2	67.49366992349736	0.4277823096851425	6				NaN	NaN	0	NaN	1159	2371	3525
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3550	14.352	NaN	15742	30	0	2818	0.214	+			3875	ATAPAPTAHK	10	75	482.76386754683006	NaN	0	482.76385498046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATAPAPTAHK_	ENSG00000184897|ENST00000333762|H1-10	109.47833844074708	0.012738494387839895	6				NaN	NaN	0	NaN	1174	2374	3549
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3551	14.355	NaN	6185.2	30	0	1514.1	0.106	+			8786	EEINTKEVVQ	10	76	594.8094279762175	NaN	0	594.8096313476562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EEINTKEVVQ_	ONECUT1|p.A298V|1|0.24|ENSG00000169856|chr15:52788992-52788992|G/A|missense_variant	76.16968421966216	0.118310876128328	6				NaN	NaN	0	NaN	1175	2374	3549
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3552	14.357	NaN	39044	30	0	9533.4	0.106				-1	 	0	77	525.8174520612773	1049.6203511893546	2	525.8192749023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1176	2374	3549
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3553	14.359	NaN	3373.4	30	0	447.63	0.106	+			29438	PCHLLVLSL	9	57	497.7917172049435	993.568881476687	2	497.793212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PCHLLVLSL_	ENSG00000148604|ENST00000652092|RGR;ENST00000372092.3_1_10:86004898-86010349:+|nuORF;ENST00000469446.5_1_10:86004840-86007552:+|nuORF;ENST00000483771.5_1_10:86004898-86007552:+|nuORF;nc|ENSG00000148604|P47804-2|RGR;nc|ENSG00000148604|P47804-3|RGR	26.79610172149135	0.5528238334041078	6				NaN	NaN	0	NaN	1177	2374	3549
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3554	14.361	NaN	2903.3	30	0	461.52	0.106	+			40969	SVGESVHGK	9	52	450.23258648771446	NaN	0	450.23248291015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVGESVHGK_	ENSG00000157916|ENST00000605895|RER1;ENST00000493207.1_1_1:2327229-2327331:+|nuORF	82.24051045832904	0.06370642293906256	6				NaN	NaN	0	NaN	1178	2374	3549
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3555	14.363	NaN	3005.2	30	0	521.79	0.033	+			2792	ARRRPPAG	8	57	440.76474139752355	879.5149298618471	2	440.7659912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ARRRPPAG_	ENST00000323039.9_2_19:40321124-40324722:-|nuORF;ENST00000593685.5_2_19:40321124-40324128:-|nuORF	35.200714571348534	0.6875396545722289	6				NaN	NaN	0	NaN	1179	2374	3549
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3556	14.363	NaN	4325.2	30	0	530.73	0.14			+	9121	EGLFHFSVA	9	57	503.7544830571654	1005.4944131811308	2	503.75628662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EGLFHFSVA_	REV__ENSG00000062822|ENST00000440232|POLD1;REV__POLD1|p.T642Hfs*97|1|0.26|ENSG00000062822|chr19:50409147-50409148|-/C|frameshift_variant;REV__POLD1|p.V933Cfs*21|1|0.29|ENSG00000062822|chr19:50415796-50415797|-/A|frameshift_variant	30.503639358989545	0.5181749237905803	6				NaN	NaN	0	NaN	1180	2374	3549
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3574	14.4	NaN	32935	30	0	5018.1	0.195				-1	 	0	80	350.8806159563503	1049.620018469251	3	350.8816833496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1195	2377	3573
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3575	14.404	NaN	74643	30	0	26812	0.106				-1	 	0	90	443.2598849182224	884.5052169032448	2	443.2610168457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1196	2377	3573
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3576	14.406	NaN	29044	30	0	10004	0.106			+	13639	GMLNLNILK	9	67	339.20438716347047	1014.5913320906114	3	339.20501708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GMLNLNILK_	REV__ENST00000257336.5_1_13:103459816-103460068:+|nuORF	39.252832667884924	0.4290233611298554	6				NaN	NaN	0	NaN	1197	2377	3573
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3577	14.408	NaN	20273	30	0	11493	0.106			+	31654	QNALCLLIK	9	74	508.30304387870154	1014.5915348242031	2	508.3038635253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QNALCLLIK_	REV__ENSG00000162065|ENST00000646147|TBC1D24;REV__nc|ENSG00000162065|Q9ULP9-2|TBC1D24;REV__TBC1D24|p.V114M|1|0.53|ENSG00000162065|chr16:2496488-2496488|G/A|missense_variant	52.936696900407355	0.27249468807391813	6				NaN	NaN	0	NaN	1198	2377	3573
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3578	14.409	NaN	5050.3	30	0	608.49	0.106	+			1929	AISETKVKK	9	62	502.31087098478736	NaN	0	502.3108215332031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AISETKVKK_	ENSG00000184634|ENST00000374080|MED12;MED12|p.E1337Kfs*8|1|0.26|ENSG00000184634|chrX:71130173-71130173|G/-|frameshift_variant;nc|ENSG00000184634|Q93074-2|MED12;nc|ENSG00000184634|Q93074-3|MED12	51.19269402634007	0.19847346126499396	6				NaN	NaN	0	NaN	1199	2377	3573
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3579	14.411	NaN	5147.1	30	0	980.22	0.106			+	31006	QESFIPLLQ	9	65	537.7985388035123	NaN	0	537.7985229492188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QESFIPLLQ_	REV__ENSG00000121270|ENST00000356608|ABCC11;REV__nc|ENSG00000121270|Q96J66-2|ABCC11	71.87747018426188	0.0992163553043454	6				NaN	NaN	0	NaN	1200	2377	3573
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3580	14.413	NaN	2790.5	30	0	449.2	0.037				-1	QCFDLCHQV	9	47	575.2452405243628	NaN	0	574.7797241210938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_QCFDLC(Carbamidomethyl (C))HQV_	DOCK8|p.E1615Dfs*7|1|0.05|ENSG00000107099|chr9:433933-433934|-/C|frameshift_variant;ENSG00000107099|ENST00000432829|DOCK8;nc|ENSG00000107099|Q8NF50-2|DOCK8;nc|ENSG00000107099|Q8NF50-3|DOCK8;nc|ENSG00000107099|Q8NF50-4|DOCK8	30.503639358989545	0.3235605894931338	6				NaN	NaN	0	NaN	1201	2377	3573
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3598	14.451	NaN	23450	30	0	2733.7	0.214				-1	 	0	96	514.7945677256932	1027.5745825181864	2	514.7962646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1216	2380	3597
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3599	14.454	NaN	50296	30	0	12916	0.106			+	-1	KVFLLCQK	8	101	345.872372468207	1034.595288004821	3	345.8735046386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_KVFLLC(Carbamidomethyl (C))QK_	REV__ENST00000485245.2_1_2:98376091-98376469:-|nuORF	60.97194046774394	0.49215940876911696	6				NaN	NaN	0	NaN	1217	2380	3597
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3600	14.456	NaN	45873	30	0	7430.3	0.106	+			32744	RAPQRLRPG	9	98	525.8174520612773	1049.6203511893546	2	526.2855224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RAPQRLRPG_	ENST00000362057.3_1_9:117266551-117266902:-|nuORF	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	1218	2380	3597
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3601	14.458	NaN	9496.5	30	0	855.53	0.106			+	21394	KMLVMRERK	9	77	595.8468459959823	1189.6791390587646	2	595.8486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KMLVMRERK_	REV__ENSG00000079616|ENST00000160827|KIF22;REV__KIF22|p.E491Nfs*36|1|0.17|ENSG00000079616|chr16:29803465-29803465|A/-|frameshift_variant;REV__nc|ENSG00000079616|Q14807-2|KIF22	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	1219	2380	3597
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3602	14.46	NaN	2629.1	30	0	715.69	0.106			+	-1	LTCFSRICPSM	11	54	637.2904667409858	1272.5663805487716	2	637.292236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_LTCFSRICPSM(Oxidation (M))_	REV__ENST00000205636.3_1_3:32523923-32524013:-|nuORF	51.19269402634007	0.4047928213175833	6				NaN	NaN	0	NaN	1220	2380	3597
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3603	14.462	NaN	7975.5	30	0	3314.1	0.035	+			38424	SSAKIKIKK	9	58	334.89388421014877	NaN	0	334.8938903808594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSAKIKIKK_	ENST00000375078.3_1_1:20809917-20810088:-|nuORF	44.377184641726394	0.24544280798894275	6				NaN	NaN	0	NaN	1221	2380	3597
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3604	14.462	NaN	3591	30	0	831.71	0.14				-1	 	0	50	501.8358179512269	1001.6570829692538	2	501.83734130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1222	2380	3597
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3622	14.502	NaN	334570	30	0	77705	0.214				-1	 	0	122	505.28617803702485	1008.5578031408497	2	505.2873840332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1237	2383	3621
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3623	14.505	NaN	9706.9	30	0	3730.7	0.106			+	18195	IMHLVYGK	8	68	488.76830263569644	975.5220523381929	2	488.7696533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_IM(Oxidation (M))HLVYGK_	REV__ENSG00000156171|ENST00000484310|DRAM2;REV__ENST00000477588.5_1_1:111661309-111663177:-|nuORF	54.76467175910256	0.5536104764165384	6				NaN	NaN	0	NaN	1238	2383	3621
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3624	14.507	NaN	21387	30	0	9291.2	0.106	+			25616	LQPDISIGKQ	10	66	366.87698461246856	1097.6091244376057	3	366.8782043457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LQPDISIGKQ_	ENSG00000144407|ENST00000272847|PTH2R;PTH2R|p.L281Ifs*27|1|0.05|ENSG00000144407|chr2:208444874-208444875|-/ATATTAGAACACT|frameshift_variant	42.86426827375447	0.522752283233888	6				NaN	NaN	0	NaN	1239	2383	3621
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3625	14.509	NaN	12923	30	0	2818.3	0.106	+			22022	KSGPVIAKR	9	83	478.30565391806545	NaN	0	478.3057861328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KSGPVIAKR_	ENSG00000109920|ENST00000263773|FNBP4;FNBP4|p.G931Efs*17|1|0.32|ENSG00000109920|chr11:47722991-47722991|T/-|frameshift_variant;FNBP4|p.K790Efs*7|1|0.34|ENSG00000109920|chr11:47724123-47724124|TT/-|frameshift_variant;FNBP4|p.P715Hfs*26|1|0.51|ENSG00000109920|chr11:47724643-47724643|G/-|frameshift_variant;FNBP4|p.W950Vfs*7|1|0.22|ENSG00000109920|chr11:47720045-47720046|-/T|frameshift_variant;nc|ENSG00000109920|Q8N3X1-2|FNBP4	129.42129120953632	0.0006770487180932568	6				NaN	NaN	0	NaN	1240	2383	3621
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3626	14.511	NaN	444480	30	0	100160	0.106			+	41024	SVHLRRNQ	8	113	337.19300212275164	1008.557176968455	3	337.1940612792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVHLRRNQ_	REV__PNPLA4|p.R110dup|1|0.44|ENSG00000006757|chrX:7921792-7921793|-/GTC|inframe_insertion	42.396135135203025	0.6414440140393314	6				NaN	NaN	0	NaN	1241	2383	3621
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3627	14.513	NaN	11572	30	0	1850	0.036	+			1532	AGAVLEIICPL	11	78	549.8140869140625	NaN	0	549.8140869140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AGAVLEIICPL_	ENST00000527424.5_1_8:42742976-42751768:-|nuORF;ENST00000531440.5_1_8:42744549-42751720:-|nuORF;ENST00000534961.5_1_8:42751546-42751720:-|nuORF	58.2462437865262	0.24969438890455364	6				NaN	NaN	0	NaN	1242	2383	3621
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3628	14.513	NaN	7136.2	30	0	2377	0.141			+	9977	ERGQAGKHSR	10	73	563.2970099392751	1124.57946694535	2	563.2990112304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ERGQAGKHSR_	REV__ENST00000497343.5_1_3:160473400-160474084:+|nuORF	54.722347961057174	0.4138398245444204	6				NaN	NaN	0	NaN	1243	2383	3621
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3646	14.551	NaN	25683	30	0	7399.8	0.214	+			9858	EPYAGYDRH	9	60	554.2463295932026	1106.4781062532052	2	554.2482299804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EPYAGYDRH_	ENSG00000116199|ENST00000263733|FAM20B	26.69291269510374	0.5537881896960711	6				NaN	NaN	0	NaN	1258	2386	3645
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3647	14.555	NaN	30672	30	0	6610.5	0.106			+	35448	SASKKQSKQ	9	83	331.1895160347625	990.5467187044876	3	331.1905517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SASKKQSKQ_	REV__ENST00000535413.1_1_12:121134228-121138519:+|nuORF	58.78195531508484	0.22376836668196862	6				NaN	NaN	0	NaN	1259	2386	3645
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3648	14.557	NaN	9464.9	30	0	2713.2	0.106				-1	 	0	60	426.25178416087175	850.4890153885435	2	426.25286865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1260	2386	3645
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3649	14.558	NaN	7690.3	30	0	2621.2	0.106	+			19245	KADAESGLWA	10	66	524.2601253869018	1046.5056978406035	2	524.2621459960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KADAESGLWA_	ENST00000341511.10_1_9:139901839-139902202:-|nuORF	41.42661286455405	0.5359995577334734	6				NaN	NaN	0	NaN	1261	2386	3645
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3650	14.56	NaN	5357.5	30	0	1369.8	0.106				-1	GALCDTNPLN	10	59	537.7498168945312	NaN	0	537.7498168945312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_GALC(Carbamidomethyl (C))DTNPLN_	ENSG00000134250|ENST00000256646|NOTCH2;NOTCH2|p.A1083Sfs*17|1|0.17|ENSG00000134250|chr1:119937947-119937948|-/T|frameshift_variant;NOTCH2|p.D437Mfs*9|1|0.09|ENSG00000134250|chr1:119967577-119967577|C/-|frameshift_variant;NOTCH2|p.I2304Hfs*9|1|0.38|ENSG00000134250|chr1:119915812-119915813|-/G|frameshift_variant;NOTCH2|p.S1419Afs*8|1|0.27|ENSG00000134250|chr1:119925562-119925562|G/-|frameshift_variant;NOTCH2|p.V1697Gfs*9|1|0.37|ENSG00000134250|chr1:119922359-119922360|-/C|frameshift_variant	35.61828744233558	0.3832230071539346	6				NaN	NaN	0	NaN	1262	2386	3645
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3651	14.562	NaN	14552	30	0	2702.8	0.036			+	32100	QSGLASCFLQ	10	70	527.2567421531335	1052.4989313730669	2	527.26904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QSGLASCFLQ_	REV__ENST00000462722.5_1_9:131597926-131600079:-|nuORF	56.43379154798735	0.3982744522255666	6				NaN	NaN	0	NaN	1263	2386	3645
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3652	14.563	NaN	5077.4	30	0	911.21	0.143				-1	SEAKHILMQK	10	58	600.8241689796976	1199.633785026195	2	600.8258666992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_SEAKHILM(Oxidation (M))QK_	ENSG00000112159|ENST00000369393|MDN1;MDN1|p.L5278Ffs*6|1|0.18|ENSG00000112159|chr6:89652273-89652274|-/A|frameshift_variant	31.529811441608018	0.6223461015008678	6				NaN	NaN	0	NaN	1264	2386	3645
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3670	14.602	NaN	30345	30	0	10585	0.214			+	21632	KPSIQATMC	9	72	518.2511698665271	1034.4877867998541	2	518.2527465820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_KPSIQATMC(Carbamidomethyl (C))_	REV__ENST00000397002.6_1_14:24550209-24550419:-|nuORF	71.29570347882199	0.13518600952103718	6				NaN	NaN	0	NaN	1279	2389	3669
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3671	14.606	NaN	63001	30	0	26005	0.106	+			11666	FQPRGLEGP	9	99	500.7640583633516	999.5135637935032	2	500.765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FQPRGLEGP_	ENSG00000080854|ENST00000533871|IGSF9B;IGSF9B|p.T1083Hfs*72|2|0.42|ENSG00000080854|chr11:133920478-133920479|-/G|frameshift_variant;IGSF9B|p.T1083Pfs*48|1|0.11|ENSG00000080854|chr11:133920479-133920479|G/-|frameshift_variant;nc|ENSG00000080854|Q9UPX0|IGSF9B	102.7733458925114	0.03637199559902695	6				NaN	NaN	0	NaN	1280	2389	3669
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3672	14.608	NaN	13502	30	0	2116.4	0.106			+	38907	SSPPPCQLTPG	11	82	542.2604096450045	1082.506266356809	2	542.2626342773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSPPPCQLTPG_	REV__ENSG00000125505|ENST00000245615|MBOAT7;REV__nc|ENSG00000125505|Q96N66-2|MBOAT7;REV__nc|ENSG00000125505|Q96N66-3|MBOAT7	90.60085204095205	0.09631492835457038	6				NaN	NaN	0	NaN	1281	2389	3669
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3673	14.61	NaN	7344.4	30	0	1249.9	0.106			+	22152	KSRGRERG	8	76	473.2703679910904	944.5261830489808	2	473.2716064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KSRGRERG_	REV__ENSG00000198216|ENST00000367573|CACNA1E;REV__nc|ENSG00000198216|Q15878-2|CACNA1E;REV__nc|ENSG00000198216|Q15878-3|CACNA1E	42.396135135203025	0.6414440140393314	6				NaN	NaN	0	NaN	1282	2389	3669
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3674	14.611	NaN	15117	30	0	4270.6	0.106			+	19678	KDPCYFAPI	9	72	527.2567421531335	1052.4989313730669	2	527.2586669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KDPCYFAPI_	REV__ENSG00000138439|ENST00000392238|FAM117B	53.351449002276354	0.2690372970092375	6				NaN	NaN	0	NaN	1283	2389	3669
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3675	14.613	NaN	3487.6	30	0	448.55	0.035			+	33902	RRRRSPAK	8	57	513.8231806132014	1025.6318082932028	2	514.8087158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RRRRSPAK_	REV__ENSG00000141664|ENST00000269499|ZCCHC2;REV__ZCCHC2|p.P959Lfs*21|1|0.06|ENSG00000141664|chr18:62574947-62574948|-/CTGTTCCT|frameshift_variant	21.9598887501803	0.7897753010812679	6				NaN	NaN	0	NaN	1284	2389	3669
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3676	14.614	NaN	3253	30	0	646.63	0.144			+	3628	ASVVGPMLGPV	11	44	342.860103364305	1025.5584806931151	3	342.8611145019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASVVGPMLGPV_	REV__ENST00000609682.1_1_3:101395365-101395752:+|nuORF	26.69291269510374	0.70980431218767	6				NaN	NaN	0	NaN	1285	2389	3669
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3694	14.653	NaN	10450	30	0	996.42	0.214	+			6489	AWAFLSLFR	9	81	555.8080501313231	1109.601547329446	2	556.3456420898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AWAFLSLFR_	ENSG00000185313|ENST00000449082|SCN10A;SCN10A|p.E906Rfs*2|1|0.13|ENSG00000185313|chr3:38726977-38726977|C/-|frameshift_variant;SCN10A|p.F1805Lfs*8|1|0.1|ENSG00000185313|chr3:38697805-38697805|A/-|frameshift_variant	44.116797842482775	0.37197099687881774	6				NaN	NaN	0	NaN	1300	2392	3693
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3695	14.657	NaN	19993	30	0	4778.6	0.106			+	46063	VCKFRLGLALL	11	65	411.589320123363	1231.746130970289	3	411.59051513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VCKFRLGLALL_	REV__ENST00000395989.7_3_20:50715116-50721421:-|nuORF	20.83715455343099	0.7712264395190968	6				NaN	NaN	0	NaN	1301	2392	3693
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3696	14.659	NaN	17051	30	0	1618.4	0.106			+	34128	RSTAERRSQ	9	72	545.7889325324677	1089.5633121317353	2	545.7908935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RSTAERRSQ_	REV__ENST00000460428.5_1_1:35641986-35642968:-|nuORF;REV__ENST00000471991.5_1_1:35641986-35642968:-|nuORF	99.37495909608758	0.03983967222258828	6				NaN	NaN	0	NaN	1302	2392	3693
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3697	14.661	NaN	3883.3	30	0	594.23	0.106			+	9364	EIVRTMST	8	58	468.74287754393424	935.4712021546685	2	468.2870788574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EIVRTMST_	REV__ENSG00000163902|ENST00000296255|RPN1;REV__RPN1|p.L225M|1|0.44|ENSG00000163902|chr3:128632118-128632118|G/T|missense_variant	44.116797842482775	0.6307669463330267	6				NaN	NaN	0	NaN	1303	2392	3693
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3698	14.663	NaN	8241.4	30	0	713.69	0.106				-1	 	0	76	568.8049776872155	1135.5954024412308	2	568.8069458007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1304	2392	3693
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3699	14.664	NaN	2777.4	30	0	335.69	0.039			+	20951	KKDKSYWSVK	10	59	423.57266183894353	1267.6961561170306	3	423.5738220214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KKDKSYWSVK_	REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-10|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-13|TTN;REV__nc|ENSG00000155657|Q8WZ42-2|TTN;REV__nc|ENSG00000155657|Q8WZ42-3|TTN;REV__nc|ENSG00000155657|Q8WZ42-4|TTN;REV__nc|ENSG00000155657|Q8WZ42-5|TTN;REV__nc|ENSG00000155657|Q8WZ42-6|TTN;REV__nc|ENSG00000155657|Q8WZ42-7|TTN;REV__nc|ENSG00000155657|Q8WZ42-8|TTN;REV__nc|ENSG00000155657|Q8WZ42-9|TTN;REV__nc|ENSG00000155657|Q8WZ42|TTN;REV__TTN|p.A12650Gfs*4|1|0.4|ENSG00000155657|chr2:178633489-178633490|-/T|frameshift_variant;REV__TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;REV__TTN|p.A7105Cfs*8|1|0.32|ENSG00000155657|chr2:178722523-178722524|-/A|frameshift_variant;REV__TTN|p.D20259Rfs*40|1|0.44|ENSG00000155657|chr2:178583105-178583106|-/T|frameshift_variant;REV__TTN|p.D21555Ifs*6|1|0.33|ENSG00000155657|chr2:178576659-178576659|G/-|frameshift_variant;REV__TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;REV__TTN|p.D9026Afs*9|1|0.26|ENSG00000155657|chr2:178711205-178711208|CTGT/-|frameshift_variant;REV__TTN|p.E15132Sfs*22|1|0.27|ENSG00000155657|chr2:178612094-178612094|C/-|frameshift_variant;REV__TTN|p.E20392Dfs*6|1|0.04|ENSG00000155657|chr2:178582357-178582358|-/TTTAAAATTA|frameshift_variant;REV__TTN|p.E20392Kfs*4|1|0.02|ENSG00000155657|chr2:178582359-178582360|-/TTTT|frameshift_variant;REV__TTN|p.E9224Gfs*8|1|0.04|ENSG00000155657|chr2:178709697-178709698|-/TCTTATGATATCTTGAC|frameshift_variant;REV__TTN|p.F18705Lfs*8|1|0.37|ENSG00000155657|chr2:178590687-178590687|A/-|frameshift_variant;REV__TTN|p.G12742Vfs*2|1|0.05|ENSG00000155657|chr2:178632983-178632983|C/-|frameshift_variant;REV__TTN|p.G14712Dfs*11|1|0.37|ENSG00000155657|chr2:178614341-178614341|G/-|frameshift_variant;REV__TTN|p.G19920Afs*12|1|0.42|ENSG00000155657|chr2:178584961-178584961|G/-|frameshift_variant;REV__TTN|p.G22029Efs*22|2|0.13|ENSG00000155657|chr2:178575125-178575125|T/-|frameshift_variant;REV__TTN|p.I10495Nfs*4|1|0.37|ENSG00000155657|chr2:178685288-178685289|-/T|frameshift_variant;REV__TTN|p.I24998Nfs*2|1|0.35|ENSG00000155657|chr2:178566216-178566217|-/T|frameshift_variant;REV__TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;REV__TTN|p.I3592Lfs*36|1|0.25|ENSG00000155657|chr2:178741508-178741508|T/-|frameshift_variant;REV__TTN|p.I9225Cfs*34|1|0.06|ENSG00000155657|chr2:178709695-178709696|-/ATATCCATGAGCA|frameshift_variant;REV__TTN|p.K10923Rfs*104|2|0.23|ENSG00000155657|chr2:178679362-178679362|T/-|frameshift_variant;REV__TTN|p.K11381Nfs*25|1|0.07|ENSG00000155657|chr2:178671133-178671133|T/-|frameshift_variant;REV__TTN|p.K11556Sfs*15|1|0.39|ENSG00000155657|chr2:178652287-178652287|T/-|frameshift_variant;REV__TTN|p.K14271Qfs*5|1|0.02|ENSG00000155657|chr2:178617351-178617352|-/G|frameshift_variant;REV__TTN|p.K26626Nfs*34|1|0.34|ENSG00000155657|chr2:178561331-178561331|T/-|frameshift_variant;REV__TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;REV__TTN|p.K4988Ifs*4|1|0.06|ENSG00000155657|chr2:178733381-178733382|-/GAAAATGATG|frameshift_variant;REV__TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;REV__TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant;REV__TTN|p.L7142*|1|0.06|ENSG00000155657|chr2:178722407-178722411|TCTTA/-|frameshift_variant;REV__TTN|p.M4154Nfs*4|1|0.21|ENSG00000155657|chr2:178739821-178739822|-/T|frameshift_variant;REV__TTN|p.N13487Tfs*49|1|0.34|ENSG00000155657|chr2:178621335-178621335|T/-|frameshift_variant;REV__TTN|p.N15496Ifs*16|1|0.09|ENSG00000155657|chr2:178610116-178610116|T/-|frameshift_variant;REV__TTN|p.N6458Mfs*74|1|0.44|ENSG00000155657|chr2:178725998-178725998|T/-|frameshift_variant;REV__TTN|p.N7648Tfs*27|1|0.32|ENSG00000155657|chr2:178719598-178719598|T/-|frameshift_variant;REV__TTN|p.N8964Tfs*27|1|0.11|ENSG00000155657|chr2:178711988-178711988|T/-|frameshift_variant;REV__TTN|p.P16126Rfs*3|1|0.25|ENSG00000155657|chr2:178607301-178607302|TG/-|frameshift_variant;REV__TTN|p.P22810Hfs*10|1|0.03|ENSG00000155657|chr2:178572780-178572781|-/AAAT|frameshift_variant;REV__TTN|p.P4036Qfs*14|1|0.19|ENSG00000155657|chr2:178740175-178740175|G/-|frameshift_variant;REV__TTN|p.S5235Hfs*25|1|0.06|ENSG00000155657|chr2:178732315-178732316|-/ATATATG|frameshift_variant;REV__TTN|p.T4116Sfs*25|1|0.04|ENSG00000155657|chr2:178739937-178739938|-/CTATTATATATGAGGAA|frameshift_variant;REV__TTN|p.V10632Yfs*16|1|0.16|ENSG00000155657|chr2:178683254-178683254|T/-|frameshift_variant;REV__TTN|p.V11008Sfs*13|1|0.33|ENSG00000155657|chr2:178678146-178678147|-/T|frameshift_variant;REV__TTN|p.V11345Ffs*4|1|0.4|ENSG00000155657|chr2:178672044-178672044|T/-|frameshift_variant;REV__TTN|p.V13823*|1|0.28|ENSG00000155657|chr2:178620027-178620027|C/-|frameshift_variant;REV__TTN|p.V22573Cfs*4|2|0.31|ENSG00000155657|chr2:178573492-178573492|C/-|frameshift_variant;REV__TTN|p.V27442Cfs*4|1|0.05|ENSG00000155657|chr2:178558107-178558108|-/A|frameshift_variant;REV__TTN|p.W5728Mfs*3|1|0.07|ENSG00000155657|chr2:178730267-178730268|-/T|frameshift_variant	54.722347961057174	0.4138398245444204	6				NaN	NaN	0	NaN	1305	2392	3693
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3700	14.665	NaN	8548	30	0	2482	0.142	+			37641	SLQLRGLVVL	10	63	366.57160665365814	1096.6929905611744	3	366.5729064941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SLQLRGLVVL_	ENSG00000164494|ENST00000369037|PDSS2;nc|ENSG00000164494|Q86YH6-2|PDSS2	28.081489160057373	0.6505064946289502	6				NaN	NaN	0	NaN	1306	2392	3693
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3718	14.704	NaN	14051	30	0	2887.4	0.214			+	-1	PLNAVFESM	9	69	512.2446926585096	1022.4748323838193	2	512.2462768554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_PLNAVFESM(Oxidation (M))_	REV__ENSG00000107014|ENST00000381627|RLN2;REV__ENST00000416837.1_1_9:5300100-5304129:-|nuORF	47.91560031466742	0.327412564698279	6				NaN	NaN	0	NaN	1321	2395	3717
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3719	14.708	NaN	10718	30	0	772.62	0.106	+			43019	TEKRSTVAC	9	65	497.75104725144223	993.4875415696845	2	497.75274658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEKRSTVAC_	ENSG00000112799|ENST00000230568|LY86	56.43379154798735	0.2433427591689151	6				NaN	NaN	0	NaN	1322	2395	3717
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3720	14.71	NaN	8534.2	30	0	1144.2	0.106			+	7292	DARRGLGVR	9	73	333.86422207376853	998.5708368215056	3	333.86956787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DARRGLGVR_	REV__ENST00000226230.7_1_17:26646143-26652544:+|nuORF	23.04248740728303	0.5879033540491928	6				NaN	NaN	0	NaN	1323	2395	3717
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3721	14.712	NaN	9687.7	30	0	5082	0.106			+	-1	FEVRDKCDQL	10	45	655.3136190000356	1308.612685066871	2	655.31591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_FEVRDKC(Carbamidomethyl (C))DQL_	REV__BAHCC1|p.S777C|1|0.18|ENSG00000266074|chr17:81444385-81444385|A/T|missense_variant	47.657333605630114	0.47858658696240314	6				NaN	NaN	0	NaN	1324	2395	3717
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3722	14.714	NaN	11062	30	0	923.66	0.106	+			16234	HEEEKRSAL	9	80	549.7809877844458	NaN	0	549.781005859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HEEEKRSAL_	ENSG00000197892|ENST00000524189|KIF13B;KIF13B|p.K1288Rfs*13|1|0.34|ENSG00000197892|chr8:29113530-29113530|T/-|frameshift_variant	90.60085204095205	0.040385177724871185	6				NaN	NaN	0	NaN	1325	2395	3717
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3723	14.716	NaN	3286.4	30	0	474.55	0.036			+	20722	KGSSKSKNKE	10	65	546.8080812494912	NaN	0	546.80810546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KGSSKSKNKE_	REV__ENSG00000125676|ENST00000245838|THOC2;REV__nc|ENSG00000125676|Q8NI27-2|THOC2	37.81151784470057	0.3760215235790741	6				NaN	NaN	0	NaN	1326	2395	3717
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3724	14.716	NaN	7802.3	30	0	889.17	0.139	+			24675	LGVWRGAW	8	66	472.75864627290264	943.5027396126053	2	473.25909423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LGVWRGAW_	ENST00000520584.5_1_8:144331869-144331947:+|nuORF	46.76643321282427	0.6143254112625767	6				NaN	NaN	0	NaN	1327	2395	3717
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3742	14.756	NaN	1081600	30	0	147350	0.133				-1	 	0	108	448.74389431698603	895.4732357007721	2	448.7451477050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1342	2398	3741
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3743	14.758	NaN	100230	30	0	43065	0.106	+			8595	ECEIKLEG	8	68	460.72314028927246	919.431727645345	2	460.7242126464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ECEIKLEG_	ENSG00000167548|ENST00000301067|KMT2D;KMT2D|p.A2119Lfs*25|1|0.13|ENSG00000167548|chr12:49041416-49041416|G/-|frameshift_variant;KMT2D|p.A3552Sfs*4|1|0.51|ENSG00000167548|chr12:49034153-49034154|-/T|frameshift_variant;KMT2D|p.A5076Hfs*2|1|0.12|ENSG00000167548|chr12:49026740-49026740|C/-|frameshift_variant;KMT2D|p.G2279Wfs*20|1|0.45|ENSG00000167548|chr12:49040935-49040936|-/A|frameshift_variant;KMT2D|p.G5182Afs*61|1|0.57|ENSG00000167548|chr12:49026421-49026421|C/-|frameshift_variant;KMT2D|p.P2354Lfs*30|7|0.16|ENSG00000167548|chr12:49040709-49040709|G/-|frameshift_variant;KMT2D|p.P2716Lfs*17|1|0.24|ENSG00000167548|chr12:49039519-49039519|C/-|frameshift_variant;KMT2D|p.P3102Lfs*17|1|0.26|ENSG00000167548|chr12:49038051-49038051|G/-|frameshift_variant;KMT2D|p.Q4156Nfs*5|1|0.15|ENSG00000167548|chr12:49032239-49032239|G/-|frameshift_variant;KMT2D|p.S2532Lfs*11|1|0.24|ENSG00000167548|chr12:49040177-49040177|G/-|frameshift_variant;KMT2D|p.S4327Afs*57|1|0.44|ENSG00000167548|chr12:49031727-49031727|G/-|frameshift_variant;KMT2D|p.T4629Hfs*18|1|0.31|ENSG00000167548|chr12:49030394-49030395|-/G|frameshift_variant;KMT2D|p.T4629Pfs*11|1|0.27|ENSG00000167548|chr12:49030395-49030395|G/-|frameshift_variant;KMT2D|p.V3089Wfs*30|1|0.12|ENSG00000167548|chr12:49038091-49038091|C/-|frameshift_variant;KMT2D|p.Y2907Tfs*3|1|0.26|ENSG00000167548|chr12:49038637-49038637|A/-|frameshift_variant;nc|ENSG00000167548|O14686-3|KMT2D	49.44154591367651	0.597725784090933	6				NaN	NaN	0	NaN	1343	2398	3741
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3744	14.76	NaN	13616	30	0	4991	0.106	+			43413	TGKHWEKK	8	76	507.2800036457172	1012.5454543582345	2	507.281494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TGKHWEKK_	ENST00000381569.5_2_8:20112800-20161332:-|nuORF	58.22992032128504	0.519305013932957	6				NaN	NaN	0	NaN	1344	2398	3741
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3745	14.762	NaN	10227	30	0	1432.3	0.106				-1	 	0	76	558.8385900261515	1115.6626271191028	2	558.8404541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1345	2398	3741
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3746	14.764	NaN	6146.7	30	0	1549.2	0.106			+	35108	SAGGGVGPQRK	11	54	338.5218487739662	1012.5437169220986	3	338.5234069824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SAGGGVGPQRK_	REV__ENST00000391759.5_2_19:54617871-54617922:-|nuORF	25.57405402267927	0.7215402271931856	6				NaN	NaN	0	NaN	1346	2398	3741
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3747	14.765	NaN	23684	30	0	4558.4	0.106	+			38297	SQTYMAMY	8	78	497.70424107887806	993.3939292245561	2	497.70556640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SQTYMAMY_	ENSG00000161091|ENST00000355415|MFSD12;nc|ENSG00000161091|Q6NUT3-2|MFSD12;nc|ENSG00000161091|Q6NUT3-3|MFSD12;nc|ENSG00000161091|Q6NUT3-4|MFSD12	31.954861631926434	0.7126016770032289	6				NaN	NaN	0	NaN	1347	2398	3741
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3748	14.767	NaN	13399	30	0	3855.1	0.034			+	-1	AVVEVAMIP	9	69	472.75864627290264	943.5027396126053	2	472.76116943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_AVVEVAM(Oxidation (M))IP_	REV__ENSG00000168827|ENST00000486715|GFM1;REV__ENST00000477721.1_1_3:158399847-158408148:+|nuORF;REV__nc|ENSG00000168827|Q96RP9-2|GFM1	42.47446043378293	0.39123495718708534	6				NaN	NaN	0	NaN	1348	2398	3741
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3766	14.804	NaN	6216.2	30	0	2366.8	0.214				-1	LSPLFPSLCA	10	49	368.8634901826497	1103.568641148149	3	368.8646240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_LSPLFPSLC(Carbamidomethyl (C))A_	ENST00000589882.1_1_6:41248622-41249060:-|nuORF;nc|ENSG00000124731|Q9NP99-3|TREM1	29.170058357718403	0.6416167986984785	6				NaN	NaN	0	NaN	1363	2401	3765
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3767	14.808	NaN	4945.2	30	0	564.87	0.106	+			9143	EGLSSTRAQR	10	67	552.7918048688433	1103.5690568044865	2	552.7938232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EGLSSTRAQR_	ENST00000378078.4_1_9:35756525-35756705:+|nuORF	54.722347961057174	0.4138398245444204	6				NaN	NaN	0	NaN	1364	2401	3765
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3768	14.81	NaN	10931	30	0	2541.2	0.106	+			48533	VTNPKRIAK	9	71	342.88452830807853	1025.6317555244357	3	342.8853454589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTNPKRIAK_	ENSG00000074800|ENST00000234590|ENO1;ENST00000464920.1_1_1:8921421-8930582:-|nuORF;nc|ENSG00000074800|P06733-2|ENO1	42.86426827375447	0.38666266728046506	6				NaN	NaN	0	NaN	1365	2401	3765
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3769	14.812	NaN	11855	30	0	3120.6	0.106	+			19424	KAPSRRRR	8	72	513.8231806132014	1025.6318082932028	2	513.8245239257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KAPSRRRR_	ENSG00000141664|ENST00000269499|ZCCHC2;ZCCHC2|p.P959Lfs*21|1|0.06|ENSG00000141664|chr18:62574947-62574948|-/CTGTTCCT|frameshift_variant	68.78682469695295	0.41700713582915416	6				NaN	NaN	0	NaN	1366	2401	3765
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3770	14.813	NaN	4171.7	30	0	803.49	0.106			+	-1	PQEPEQECPRV	11	73	684.8144865167745	1367.614420100349	2	684.8162841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_PQEPEQEC(Carbamidomethyl (C))PRV_	REV__ENSG00000136999|ENST00000259526|CCN3	43.650786325866115	0.5079891456189096	6				NaN	NaN	0	NaN	1367	2401	3765
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3771	14.815	NaN	8066.5	30	0	996.53	0.038			+	31372	QKEEPRVRK	9	73	390.5630854683064	1168.6674270051192	3	390.5643615722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QKEEPRVRK_	REV__ENSG00000167674|ENST00000616600|HDGFL2;REV__nc|ENSG00000167674|Q7Z4V5-2|HDGFL2;REV__nc|ENSG00000167674|Q7Z4V5-3|HDGFL2;REV__nc|ENSG00000167674|Q7Z4V5-4|HDGFL2	41.42661286455405	0.403525789677298	6				NaN	NaN	0	NaN	1368	2401	3765
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3772	14.816	NaN	1647.9	30	0	126.37	0.138			+	30686	QCKRASLA	8	50	438.73790817073575	875.4612634082715	2	438.73944091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QCKRASLA_	REV__ARHGEF10L|p.P650Hfs*34|1|0.39|ENSG00000074964|chr1:17637904-17637904|C/-|frameshift_variant;REV__ENSG00000074964|ENST00000361221|ARHGEF10L;REV__ENST00000469726.5_1_1:17942561-18023872:+|nuORF;REV__nc|ENSG00000074964|Q9HCE6-2|ARHGEF10L;REV__nc|ENSG00000074964|Q9HCE6-3|ARHGEF10L;REV__nc|ENSG00000074964|Q9HCE6-4|ARHGEF10L;REV__nc|ENSG00000074964|Q9HCE6-5|ARHGEF10L	55.50420428727701	0.5462892107279674	6				NaN	NaN	0	NaN	1369	2401	3765
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3789	14.853	NaN	65855	30	0	9350.8	0.214				-1	 	0	90	491.2815271456534	980.5485013581068	2	491.28277587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1383	2404	3788
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3790	14.856	NaN	36946	30	0	9737.3	0.106				-1	 	0	86	483.2604673923587	964.5063818515174	2	483.26153564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1384	2404	3788
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3791	14.859	NaN	11833	30	0	1420	0.106				-1	KRDHNGCR	8	72	521.7512498734372	1041.4879468136744	2	521.7531127929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_KRDHNGC(Carbamidomethyl (C))R_	CRIM1|p.P856Lfs*67|1|0.19|ENSG00000150938|chr2:36537485-36537485|C/-|frameshift_variant;ENSG00000150938|ENST00000280527|CRIM1;ENST00000481321.1_1_2:36706686-36726495:+|nuORF	90.77665401227738	0.27511901818546464	6				NaN	NaN	0	NaN	1385	2404	3788
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3792	14.86	NaN	29248	30	0	8125.2	0.106				-1	 	0	47	322.50930427240417	964.5060834174126	3	322.5102233886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1386	2404	3788
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3793	14.862	NaN	3964.6	30	0	293	0.106	+			46866	VIKVNSKQ	8	62	458.28445200849666	NaN	0	458.2844543457031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VIKVNSKQ_	DNPEP|p.Y391F|1|0.16|ENSG00000123992|chr2:219381402-219381402|T/A|missense_variant;ENSG00000123992|ENST00000273075|DNPEP;nc|ENSG00000123992|Q9ULA0-2|DNPEP	60.97194046774394	1.7418937515398478	6				NaN	NaN	0	NaN	1387	2404	3788
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3794	14.864	NaN	13633	30	0	3940.6	0.037			+	21177	KKWYLFMK	8	63	572.324941539078	NaN	0	572.3248901367188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KKWYLFMK_	REV__ENST00000373433.8_1_20:36687832-36687916:+|nuORF	47.91560031466742	1.7418937515398478	6				NaN	NaN	0	NaN	1388	2404	3788
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3795	14.865	NaN	10972	30	0	2100.3	0.145	+			38665	SSIQNEIPKK	10	51	381.8841210396753	1142.630533719226	3	381.8852844238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSIQNEIPKK_	ENSG00000009780|ENST00000373954|FAM76A;nc|ENSG00000009780|Q8TAV0-3|FAM76A	30.568863376406313	0.6301935916953115	6				NaN	NaN	0	NaN	1389	2404	3788
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3813	14.903	NaN	117090	30	0	22884	0.142	+			32453	QVKKNQRIS	9	76	550.8304604335159	1099.6463679338317	2	550.8323974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QVKKNQRIS_	ENSG00000249931|ENST00000512626|GOLGA8K;ENSG00000261247|ENST00000569052|GOLGA8T;ENSG00000261794|ENST00000566740|GOLGA8H	101.25262130126117	0.03792372629710479	6				NaN	NaN	0	NaN	1404	2407	3812
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3814	14.906	NaN	20696	30	0	1918.9	0.106	+			37084	SISGVCRQL	9	89	510.2697290736193	1018.5249052140387	2	510.27215576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SISGVC(Carbamidomethyl (C))RQL_	ENST00000416144.5_1_7:99160096-99161679:+|nuORF;ENST00000422422.5_1_7:99158252-99161679:+|nuORF	104.74654710444128	0.034358562718640136	6				NaN	NaN	0	NaN	1405	2407	3812
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3815	14.908	NaN	16107	30	0	6704.1	0.106	+			22804	KVFGGTVHKK	10	73	367.5574234176044	NaN	0	367.5574645996094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KVFGGTVHKK_	ENSG00000163655|ENST00000496455|GMPS;GMPS|p.S473Lfs*26|1|0.37|ENSG00000163655|chr3:155922281-155922281|T/-|frameshift_variant;nc|ENSG00000163655|P49915-2|GMPS	84.81729255234993	0.075755877015447	6				NaN	NaN	0	NaN	1406	2407	3812
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3816	14.91	NaN	5810.8	30	0	2354.8	0.106				-1	 	0	56	363.71538013294384	725.4162073326877	2	363.716552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1407	2407	3812
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3817	14.911	NaN	11706	30	0	2688.5	0.106			+	-1	RWTPMLAL	8	67	335.18444514849216	1002.5315060456765	3	336.5259704589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_RWTPM(Oxidation (M))LAL_	REV__TENM4|p.P91Lfs*110|1|0.25|ENSG00000149256|chr11:79064959-79064959|G/-|frameshift_variant	33.51558372728122	0.7005509609380386	6				NaN	NaN	0	NaN	1408	2407	3812
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3818	14.913	NaN	8219.4	30	0	1737.6	0.106				-1	 	0	57	442.68958478145663	883.3646166297133	2	442.69085693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1409	2407	3812
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3819	14.915	NaN	8400.8	30	0	2047.9	0.037			+	32408	QVFKCELKK	9	63	561.8200181839208	1121.6254834346414	2	561.82177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QVFKCELKK_	REV__ENSG00000197081|ENST00000356956|IGF2R;REV__IGF2R|p.D2163Tfs*2|1|0.16|ENSG00000197081|chr6:160089932-160089932|G/-|frameshift_variant;REV__IGF2R|p.G2426Efs*10|1|0.25|ENSG00000197081|chr6:160104882-160104882|G/-|frameshift_variant	65.46538089061403	0.16805504838372562	6				NaN	NaN	0	NaN	1410	2407	3812
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3820	14.916	NaN	24713	30	0	3490.7	0.143	+			37338	SLELRKIGV	9	92	338.8806043965533	1013.6199837898598	3	338.8817443847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_SLELRKIGV_	ENSG00000180815|ENST00000338883|MAP3K15	54.776311868738084	0.25715957988447635	6				NaN	NaN	0	NaN	1411	2407	3812
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3838	14.955	NaN	16135	30	0	5312.1	0.204				-1	MVRLWVSP	8	64	335.18444514849216	1002.5315060456765	3	335.1854248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))VRLWVSP_	ENST00000460499.5_1_2:27659579-27664676:+|nuORF	38.80614096846853	0.6637206697844082	6				NaN	NaN	0	NaN	1426	2410	3837
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3839	14.958	NaN	7274.5	30	0	1133.3	0.106	+			35129	SAHTRKRR	8	66	337.86859968490376	1010.5839696549112	3	337.86956787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAHTRKRR_	ENST00000345057.8_1_16:67190567-67193991:-|nuORF	40.5726180659479	0.6527593143185008	6				NaN	NaN	0	NaN	1427	2410	3837
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3840	14.96	NaN	5728.2	30	0	653.94	0.106	+			21360	KMAQGQLKE	9	70	516.7791162271076	NaN	0	516.7791748046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KMAQGQLKE_	ENSG00000198597|ENST00000355537|ZNF536	54.776311868738084	0.17377682019723872	6				NaN	NaN	0	NaN	1428	2410	3837
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3841	14.962	NaN	4029.1	30	0	675.62	0.106	+			40316	STSSVLKRK	9	66	503.30463509147177	1004.5947172497436	2	503.3061218261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STSSVLKRK_	ENSG00000131871|ENST00000526049|SELENOS;ENST00000398226.7_1_15:101812984-101817622:-|nuORF;ENST00000527833.5_1_15:101814613-101814733:-|nuORF;ENST00000531964.5_1_15:101812984-101817507:-|nuORF	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	1429	2410	3837
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3842	14.964	NaN	4821.4	30	0	626.94	0.106			+	51236	YPWIDLAPKA	10	60	391.8814912580423	1172.622644374327	3	391.8826904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YPWIDLAPKA_	REV__BPTF|p.D2844Afs*20|1|0.08|ENSG00000171634|chr17:67959766-67959767|-/C|frameshift_variant;REV__BPTF|p.K2718Nfs*36|3|0.12|ENSG00000171634|chr17:67948150-67948150|A/-|frameshift_variant;REV__ENSG00000171634|ENST00000306378|BPTF;REV__nc|ENSG00000171634|Q12830-4|BPTF;REV__nc|ENSG00000171634|Q12830|BPTF	27.047317107675042	0.6589519614906109	6				NaN	NaN	0	NaN	1430	2410	3837
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3843	14.966	NaN	2984	30	0	561.63	0.106	+			21855	KRKLPCDTPG	10	70	557.8038824510469	1113.5932119688937	2	557.8058471679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KRKLPCDTPG_	ENSG00000124151|ENST00000371998|NCOA3;nc|ENSG00000124151|Q9Y6Q9-2|NCOA3;nc|ENSG00000124151|Q9Y6Q9-3|NCOA3;nc|ENSG00000124151|Q9Y6Q9-4|NCOA3;nc|ENSG00000124151|Q9Y6Q9-5|NCOA3;NCOA3|p.P467Hfs*15|1|0.2|ENSG00000124151|chr20:47635604-47635604|C/-|frameshift_variant;NCOA3|p.S287Ifs*8|1|0.19|ENSG00000124151|chr20:47633529-47633530|-/A|frameshift_variant	42.33807565288922	0.5276008846745733	6				NaN	NaN	0	NaN	1431	2410	3837
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3844	14.968	NaN	9446.7	30	0	2207.9	0.035				-1	 	0	65	329.18091222491137	984.5209072749342	3	329.1819152832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1432	2410	3837
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3862	15.005	NaN	17840	30	0	2617.8	0.214			+	38324	SRGGKGRHS	9	87	471.25467943165836	940.4948059301167	2	471.25579833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SRGGKGRHS_	REV__ENST00000568470.5_1_16:66968788-66968911:+|nuORF	75.04331003522576	0.118981335847003	6				NaN	NaN	0	NaN	1447	2413	3861
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3863	15.009	NaN	2409	30	0	502.69	0.106				-1	SGQPPLQDMLC	11	42	421.192721862922	NaN	0	421.1927185058594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_SGQPPLQDM(Oxidation (M))LC(Carbamidomethyl (C))_	ENSG00000167077|ENST00000401548|MEI1;nc|ENSG00000167077|Q5TIA1-2|MEI1;nc|ENSG00000167077|Q5TIA1-3|MEI1;nc|ENSG00000167077|Q5TIA1-5|MEI1;nc|ENSG00000167077|Q5TIA1-7|MEI1	26.749707702089633	0.4462038980881566	6				NaN	NaN	0	NaN	1448	2413	3861
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3864	15.011	NaN	10810	30	0	1392.1	0.106			+	-1	QCESCPAGGPG	11	78	531.7026046639313	1061.3906563946625	2	531.7044677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_QCESC(Carbamidomethyl (C))PAGGPG_	REV__ENSG00000146197|ENST00000274938|SCUBE3;REV__nc|ENSG00000146197|Q8IX30-2|SCUBE3	39.252832667884924	0.5681665794958463	6				NaN	NaN	0	NaN	1449	2413	3861
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3865	15.013	NaN	3225.9	30	0	954.41	0.106				-1	 	0	51	476.7866202087254	951.5586874842509	2	476.78741455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1450	2413	3861
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3866	15.015	NaN	30358	30	0	15061	0.106	+			44250	TSAADLTSSGI	11	67	341.5052254825333	1021.4938470478	3	341.8426513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TSAADLTSSGI_	ENST00000474513.6_1_3:63850583-63884133:+|nuORF	37.81151784470057	0.5878881669006212	6				NaN	NaN	0	NaN	1451	2413	3861
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3867	15.016	NaN	8426.2	30	0	1987.9	0.037			+	14912	GTLTSLEYAK	10	63	361.5291429314543	1081.565599394563	3	361.53045654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTLTSLEYAK_	REV__ENSG00000112658|ENST00000265354|SRF	38.753607047826485	0.5606299674732264	6				NaN	NaN	0	NaN	1452	2413	3861
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3868	15.017	NaN	22133	30	0	6610.1	0.144	+			40388	STTWGCLWIST	11	69	418.86657142190967	1253.577884865929	3	418.8678283691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STTWGCLWIST_	ARHGAP1|p.L237Cfs*135|2|0.38|ENSG00000175220|chr11:46680674-46680674|G/-|frameshift_variant;ARHGAP1|p.L237Rfs*135|1|0.37|ENSG00000175220|chr11:46680673-46680673|A/-|frameshift_variant	53.08895987439943	0.38514566451266113	6				NaN	NaN	0	NaN	1453	2413	3861
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3886	15.056	NaN	121830	30	0	15269	0.168			+	35499	SATSSRGKQK	10	96	525.2887496107494	1048.5629462882987	2	525.2903442382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SATSSRGKQK_	REV__ENSG00000227057|ENST00000374617|WDR46	99.01295224348159	0.08062808246117298	6				NaN	NaN	0	NaN	1468	2416	3885
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3887	15.059	NaN	20366	30	0	1592.2	0.106	+			11400	FLPMVRSDV	9	91	532.2836852536511	1062.5528175741022	2	532.2855834960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FLPMVRSDV_	ENST00000265022.7_1_3:185867377-185867518:-|nuORF	79.45101966838831	0.09992237243120712	6				NaN	NaN	0	NaN	1469	2416	3885
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3888	15.061	NaN	8239.3	30	0	1655.7	0.106	+			22378	KTIDASVSKK	10	62	538.8194580078125	NaN	0	538.8194580078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KTIDASVSKK_	ENSG00000171681|ENST00000261168|ATF7IP;ENST00000535179.1_1_12:14619386-14628955:+|nuORF;ENST00000537653.5_1_12:14576849-14628955:+|nuORF;nc|ENSG00000171681|Q6VMQ6-2|ATF7IP;nc|ENSG00000171681|Q6VMQ6-4|ATF7IP;nc|ENSG00000171681|Q6VMQ6-5|ATF7IP	82.5048064154565	0.08713565298565021	6				NaN	NaN	0	NaN	1470	2416	3885
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3889	15.063	NaN	3219.4	30	0	367.14	0.106			+	47750	VSGPDRKR	8	50	457.7605574282513	913.5065619233026	2	457.76165771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSGPDRKR_	REV__ENSG00000068878|ENST00000404125|PSME4;REV__nc|ENSG00000068878|Q14997-2|PSME4;REV__nc|ENSG00000068878|Q14997-3|PSME4;REV__nc|ENSG00000068878|Q14997-4|PSME4	58.78195531508484	0.5138399468736706	6				NaN	NaN	0	NaN	1471	2416	3885
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3890	15.065	NaN	8910.4	30	0	2208.4	0.106			+	-1	LQCKFYPK	8	58	375.8634591288844	1124.5685479868532	3	375.86474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))LQC(Carbamidomethyl (C))KFYPK_	REV__COL15A1|p.L1176Ifs*39|1|0.32|ENSG00000204291|chr9:99062087-99062088|-/A|frameshift_variant	47.91560031466742	0.6071945918984287	6				NaN	NaN	0	NaN	1472	2416	3885
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3891	15.067	NaN	5127.9	30	0	804.38	0.106	+			8410	EAQAVPATLPE	11	74	563.2939453125	NaN	0	563.2939453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EAQAVPATLPE_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	40.05817265558897	0.3867246477658885	6				NaN	NaN	0	NaN	1473	2416	3885
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3892	15.069	NaN	20632	30	0	5376.7	0.037	+			5046	ATSGSARKGKR	11	50	373.55117416086006	1117.6316930827802	3	373.5523376464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATSGSARKGKR_	ENSG00000118156|ENST00000391901|ZNF541;nc|ENSG00000118156|Q9H0D2-2|ZNF541;ZNF541|p.G1117Afs*52|1|0.13|ENSG00000118156|chr19:47531697-47531697|C/-|frameshift_variant;ZNF541|p.P231Rfs*49|2|0.33|ENSG00000118156|chr19:47545837-47545837|G/-|frameshift_variant;ZNF541|p.P998Qfs*46|1|0.22|ENSG00000118156|chr19:47538243-47538243|G/-|frameshift_variant;ZNF541|p.T630Pfs*22|1|0.28|ENSG00000118156|chr19:47544641-47544641|T/-|frameshift_variant	23.37791116691581	0.7445759747191538	6				NaN	NaN	0	NaN	1474	2416	3885
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3910	15.106	NaN	8645	30	0	4422.6	0.214	+			15551	GVFFINRQ	8	53	327.5152766082715	979.5240004250145	3	327.5163269042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVFFINRQ_	ENSG00000169692|ENST00000371696|AGPAT2;ENST00000472820.1_1_9:139568206-139571631:-|nuORF;nc|ENSG00000169692|O15120-2|AGPAT2	29.841539824830324	0.7289191502596711	6				NaN	NaN	0	NaN	1489	2419	3909
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3911	15.11	NaN	18381	30	0	4090.4	0.106			+	13573	GLTPFLGCSQ	10	75	511.75247919701945	1021.4904054608389	2	511.7545166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GLTPFLGCSQ_	REV__ENSG00000253293|ENST00000283921|HOXA10	54.776311868738084	0.41334902933431344	6				NaN	NaN	0	NaN	1490	2419	3909
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3912	15.112	NaN	24709	30	0	4076	0.106	+			32310	QTQQAAPSAP	10	73	499.7481686508417	997.4817843684834	2	499.7494201660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QTQQAAPSAP_	ENSG00000069188|ENST00000392650|SDK2;ENST00000479356.1_1_17:71354047-71433905:-|nuORF;nc|ENSG00000069188|Q58EX2-2|SDK2;nc|ENSG00000069188|Q58EX2-3|SDK2;nc|ENSG00000069188|Q58EX2-4|SDK2;SDK2|p.R2017Gfs*28|1|0.29|ENSG00000069188|chr17:73348716-73348716|G/-|frameshift_variant	63.53385203322761	0.33370026130094593	6				NaN	NaN	0	NaN	1491	2419	3909
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3913	15.114	NaN	7427.1	30	0	2411	0.106			+	35449	SASKKQSKQ	9	58	496.28063273898994	990.5467125447799	2	496.281982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SASKKQSKQ_	REV__ENST00000535413.1_1_12:121134228-121138519:+|nuORF	85.16082228582465	0.07850854922700509	6				NaN	NaN	0	NaN	1492	2419	3909
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3914	15.116	NaN	7068.3	30	0	754.87	0.106			+	38019	SPMPSHPKPLG	11	73	574.2999662151492	1146.5853794970983	2	574.3020629882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SPMPSHPKPLG_	REV__nc|ENSG00000164621|Q9Y6J3|SMAD5-AS1	30.317721548370564	0.6717830234747728	6				NaN	NaN	0	NaN	1493	2419	3909
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3915	15.117	NaN	6973.9	30	0	1484.4	0.036			+	51492	YVLFIFVGQ	9	69	543.3052207663021	1084.5958885994041	2	543.3740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YVLFIFVGQ_	REV__ENSG00000127507|ENST00000315576|ADGRE2;REV__nc|ENSG00000127507|Q9UHX3-2|ADGRE2;REV__nc|ENSG00000127507|Q9UHX3-3|ADGRE2;REV__nc|ENSG00000127507|Q9UHX3-4|ADGRE2;REV__nc|ENSG00000127507|Q9UHX3-5|ADGRE2;REV__nc|ENSG00000127507|Q9UHX3-6|ADGRE2	49.44154591367651	0.3095138337212152	6				NaN	NaN	0	NaN	1494	2419	3909
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3916	15.118	NaN	3402.4	30	0	659.5	0.141	+			19625	KDIKGISGTSL	11	54	559.8235286659865	1117.6325043987729	2	559.8256225585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KDIKGISGTSL_	tr|U7SJR1|U7SJR1_FUSNUAlpha-2-macroglobulindomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02061PE=3SV=1	34.08650109265054	0.6322515996262609	6				NaN	NaN	0	NaN	1495	2419	3909
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3934	15.155	NaN	162850	30	0	68152	0.196				-1	 	0	90	328.8492769670689	983.5260015014067	3	328.8502502441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1510	2422	3933
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3935	15.159	NaN	37207	30	0	13831	0.106			+	-1	KSSVRSQCG	9	67	504.74960233779285	1007.4846517423857	2	504.7512512207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_KSSVRSQC(Carbamidomethyl (C))G_	REV__ENST00000361113.9_1_19:11729024-11729201:+|nuORF	51.33545320467046	0.2872990594074956	6				NaN	NaN	0	NaN	1511	2422	3933
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3936	15.161	NaN	25917	30	0	8212.5	0.106				-1	IMRYSLQECLC	11	92	736.8389613446233	1471.6633697560464	2	736.8407592773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_IMRYSLQEC(Carbamidomethyl (C))LC(Carbamidomethyl (C))_	ENST00000286181.7_1_2:201886800-201887648:-|nuORF	30.317721548370564	0.6717830234747728	6				NaN	NaN	0	NaN	1512	2422	3933
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3937	15.162	NaN	7514.5	30	0	2137.5	0.106				-1	 	0	59	407.71782714991576	813.4211013666315	2	407.718994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1513	2422	3933
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3938	15.164	NaN	12436	30	0	2799.4	0.106	+			176	AAKQRHQQ	8	71	322.8457949825896	965.5155555479689	3	322.8467712402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AAKQRHQQ_	ENSG00000153930|ENST00000682825|ANKFN1	45.9519527083369	0.6193794311207887	6				NaN	NaN	0	NaN	1514	2422	3933
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3939	15.166	NaN	15960	30	0	2588.2	0.106	+			1638	AGNPLVQQGGQ	11	81	534.7759744783708	NaN	0	534.7760620117188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AGNPLVQQGGQ_	ENSG00000143442|ENST00000271715|POGZ;ENST00000467287.5_1_1:151401965-151414680:-|nuORF;nc|ENSG00000143442|Q7Z3K3-2|POGZ;nc|ENSG00000143442|Q7Z3K3-3|POGZ;nc|ENSG00000143442|Q7Z3K3-4|POGZ;nc|ENSG00000143442|Q7Z3K3-6|POGZ;nc|ENSG00000143442|Q7Z3K3-7|POGZ;POGZ|p.E1016Rfs*3|1|0.42|ENSG00000143442|chr1:151405989-151405989|C/-|frameshift_variant	65.46538089061403	0.1803543755190073	6				NaN	NaN	0	NaN	1515	2422	3933
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3940	15.168	NaN	13234	30	0	5118.4	0.035	+			30702	QDCNARTSGP	10	77	524.7284819054827	1047.4424108777653	2	524.730224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QDCNARTSGP_	ENST00000421890.5_1_7:5862812-5870841:+|nuORF	40.77816245573522	0.5419747034533848	6				NaN	NaN	0	NaN	1516	2422	3933
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3958	15.205	NaN	19232	30	0	2348.5	0.214	+			6157	AVQEQMRSK	9	88	538.7777777653479	1075.5410025974957	2	538.7799072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVQEQMRSK_	ENSG00000197622|ENST00000357235|CDC42SE1	123.20810148215591	0.019257656778428764	6				NaN	NaN	0	NaN	1531	2425	3957
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3959	15.209	NaN	19083	30	0	4087.3	0.106				-1	 	0	61	357.54055572623844	1069.5998377789153	3	357.5416259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1532	2425	3957
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3960	15.211	NaN	18081	30	0	2381.5	0.106			+	21454	KNFNQVGGK	9	84	496.2694710636093	990.5243891940186	2	496.27093505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KNFNQVGGK_	REV__ENSG00000114107|ENST00000264982|CEP70;REV__nc|ENSG00000114107|Q8NHQ1-2|CEP70;REV__nc|ENSG00000114107|Q8NHQ1-4|CEP70;REV__nc|ENSG00000114107|Q8NHQ1-5|CEP70	90.77665401227738	0.06267569666681755	6				NaN	NaN	0	NaN	1533	2425	3957
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3961	15.213	NaN	13529	30	0	1715.9	0.106	+			18962	IVQNGKHFK	9	68	535.8068715130548	1069.5991900929096	2	535.8090209960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IVQNGKHFK_	ENSG00000163586|ENST00000295834|FABP1	115.45897859103373	0.02394878348088707	6				NaN	NaN	0	NaN	1534	2425	3957
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3962	15.215	NaN	7684.4	30	0	2364.5	0.106	+			20538	KFKSPSVAVVQ	11	69	595.354365716725	NaN	0	595.3543090820312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KFKSPSVAVVQ_	ENSG00000115840|ENST00000422440|SLC25A12;ENST00000472070.1_1_2:172641786-172644464:-|nuORF;nc|ENSG00000115840|O75746-2|SLC25A12	43.41853373365257	0.36258927961914283	6				NaN	NaN	0	NaN	1535	2425	3957
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3963	15.216	NaN	10361	30	0	1162.6	0.038	+			8080	DVRMTLGYVGK	11	79	619.8317190958238	1237.6488852584475	2	619.8336791992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DVRMTLGYVGK_	nc|ENSG00000118197|Q5T1V6-2|DDX59	56.43379154798735	0.3552884390983883	6				NaN	NaN	0	NaN	1536	2425	3957
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3964	15.217	NaN	10090	30	0	1352.8	0.142				-1	 	0	75	491.2815271456534	980.5485013581068	2	491.28277587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1537	2425	3957
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3982	15.257	NaN	24973	30	0	4145.6	0.214				-1	 	0	82	345.20884958376024	1032.6047193514808	3	345.2099304199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1552	2428	3981
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3983	15.26	NaN	12835	30	0	2311.2	0.106				-1	 	0	65	442.7624171198387	883.5102813064774	2	442.76361083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1553	2428	3981
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3984	15.262	NaN	7418.5	30	0	896.02	0.106	+			2451	APKADRERK	9	63	535.8068715130548	1069.5991900929096	2	536.8099365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_APKADRERK_	COL5A1|p.G1351Efs*137|2|0.4|ENSG00000130635|chr9:134815605-134815605|C/-|frameshift_variant;COL5A1|p.P1302Rfs*186|1|0.05|ENSG00000130635|chr9:134814030-134814030|C/-|frameshift_variant;COL5A1|p.P1388Lfs*100|1|0.55|ENSG00000130635|chr9:134817061-134817061|G/-|frameshift_variant	35.61828744233558	0.47037581924408073	6				NaN	NaN	0	NaN	1554	2428	3981
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3985	15.264	NaN	15706	30	0	2822.9	0.106			+	33995	RSGRRPSNR	9	82	543.3052207663021	1084.5958885994041	2	543.3073120117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RSGRRPSNR_	REV__ENST00000274712.7_1_5:140080440-140083534:+|nuORF	95.81516180277367	0.04847050768394289	6				NaN	NaN	0	NaN	1555	2428	3981
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3986	15.266	NaN	4756.7	30	0	695.42	0.106				-1	KVQTAVTMK	9	67	511.2878261348356	1020.5610993364712	2	511.28924560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_KVQTAVTM(Oxidation (M))K_	ENSG00000131165|ENST00000397901|CHMP1A;ENST00000550872.1_1_16:89715668-89724092:-|nuORF	37.50817390946774	0.44948750990682723	6				NaN	NaN	0	NaN	1556	2428	3981
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3987	15.268	NaN	23996	30	0	2853.4	0.036				-1	 	0	88	552.3049143108612	1102.5952756885224	2	552.306884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1557	2428	3981
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	3988	15.268	NaN	6797.7	30	0	727.92	0.143			+	32969	REDREEQIQ	9	58	601.7920118533516	1201.569470773503	2	601.7939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_REDREEQIQ_	REV__ENSG00000163714|ENST00000473835|U2SURP;REV__ENST00000461591.5_1_3:142720470-142741912:+|nuORF;REV__ENST00000470400.5_1_3:142720470-142740424:+|nuORF;REV__nc|ENSG00000163714|O15042-2|U2SURP;REV__U2SURP|p.K866Nfs*10|1|0.31|ENSG00000163714|chr3:143050987-143050987|A/-|frameshift_variant;REV__U2SURP|p.S934Afs*11|1|0.34|ENSG00000163714|chr3:143054963-143054963|C/-|frameshift_variant	51.33545320467046	0.2872990594074956	6				NaN	NaN	0	NaN	1558	2428	3981
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4006	15.308	NaN	28903	30	0	7436.4	0.171	+			39761	STITKIHSK	9	76	507.79953197123956	1013.5845110092791	2	507.80108642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STITKIHSK_	ENSG00000138593|ENST00000559471|SECISBP2L;nc|ENSG00000138593|Q93073-2|SECISBP2L	185.71840793949184	0.0007219834064317508	6				NaN	NaN	0	NaN	1573	2431	4005
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4007	15.311	NaN	24734	30	0	7131.7	0.106	+			33288	RGLRNTAAR	9	76	338.86864580641094	1013.5841080194328	3	338.86968994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RGLRNTAAR_	ENSG00000283632|ENST00000413988|EXOC3L2;nc|ENSG00000283632|Q2M3D2|EXOC3L2	23.04248740728303	0.5879033540491928	6				NaN	NaN	0	NaN	1574	2431	4005
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4008	15.313	NaN	6084.4	30	0	448	0.106	+			44766	TTNQNVIKK	9	69	523.3043928402323	NaN	0	523.3043212890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TTNQNVIKK_	ENSG00000121621|ENST00000263181|KIF18A;ENST00000526288.1_1_11:28119059-28119494:-|nuORF;ENST00000533466.1_1_11:28098218-28119398:-|nuORF;KIF18A|p.F80Lfs*23|1|0.23|ENSG00000121621|chr11:28097708-28097708|A/-|frameshift_variant;KIF18A|p.R666Kfs*29|1|0.12|ENSG00000121621|chr11:28036616-28036617|-/T|frameshift_variant	93.1432384553994	0.0352600271724948	6				NaN	NaN	0	NaN	1575	2431	4005
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4009	15.315	NaN	41364	30	0	7460.2	0.106				-1	 	0	74	458.22310707394814	914.4316612146963	2	458.22467041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1576	2431	4005
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4010	15.316	NaN	4001.8	30	0	800.45	0.106	+			499	ACFDDATL	8	43	428.18304328160525	NaN	0	428.1832275390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ACFDDATL_	ENSG00000103227|ENST00000262301|LMF1;ENST00000569516.5_1_16:904534-921479:-|nuORF;nc|ENSG00000103227|Q96S06-2|LMF1	31.954861631926434	1.7418937515398478	6				NaN	NaN	0	NaN	1577	2431	4005
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4011	15.318	NaN	3608.7	30	0	489.21	0.106	+			25763	LSAGVDKTT	9	56	446.24218779744615	890.4698226616923	2	446.24359130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSAGVDKTT_	ENSG00000092377|ENST00000383032|TBL1Y;ENSG00000101849|ENST00000645353|TBL1X;ENSG00000177565|ENST00000457928|TBL1XR1;nc|ENSG00000101849|O60907-2|TBL1X	35.61828744233558	0.47037581924408073	6				NaN	NaN	0	NaN	1578	2431	4005
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4012	15.32	NaN	6085.7	30	0	841.22	0.036	+			16536	HEVKTQNKL	9	77	548.8101922467679	NaN	0	548.8099975585938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HEVKTQNKL_	ENSG00000105829|ENST00000222547|BET1;nc|ENSG00000105829|O15155-2|BET1	79.71258880314673	0.07236858429579222	6				NaN	NaN	0	NaN	1579	2431	4005
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4030	15.358	NaN	30571	30	0	2152.2	0.172	+			2670	AQNAKVIEK	9	84	500.79072427823746	999.566895623275	2	500.79290771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AQNAKVIEK_	ENSG00000018610|ENST00000644802|STEEP1;ENST00000469448.1_1_X:118673692-118676584:-|nuORF;nc|ENSG00000018610|Q9H5V9-2|STEEP1;nc|ENSG00000018610|Q9H5V9-3|STEEP1	120.8684288430529	0.02067403653475984	6				NaN	NaN	0	NaN	1594	2434	4029
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4031	15.361	NaN	63370	30	0	5060.4	0.106			+	16765	HMLAAIHTTK	10	99	561.8078120676901	1121.60107120218	2	561.8095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HMLAAIHTTK_	REV__ENSG00000241058|ENST00000377304|NSUN6;REV__NSUN6|p.F459Lfs*6|3|0.4|ENSG00000241058|chr10:18545966-18545966|A/-|frameshift_variant	60.97194046774394	0.3570005369683776	6				NaN	NaN	0	NaN	1595	2434	4029
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4032	15.363	NaN	5394.1	30	0	853.24	0.106	+			40381	STTTTTHITK	10	66	545.7888139962297	1089.5630750592593	2	545.7907104492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STTTTTHITK_	ENSG00000079819|ENST00000337057|EPB41L2;ENSG00000082397|ENST00000341928|EPB41L3;ENST00000368126.2_1_6:131179278-131186801:-|nuORF;ENST00000452150.6_1_6:131179278-131188835:-|nuORF;nc|ENSG00000079819|O43491-3|EPB41L2;nc|ENSG00000079819|O43491-4|EPB41L2;nc|ENSG00000082397|Q9Y2J2-2|EPB41L3;nc|ENSG00000082397|Q9Y2J2-4|EPB41L3	63.53385203322761	0.33370026130094593	6				NaN	NaN	0	NaN	1596	2434	4029
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4033	15.364	NaN	4039	30	0	416.14	0.106	+			40195	STRRHQEAQ	9	68	556.7798298125791	1111.5451066919582	2	556.781982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STRRHQEAQ_	ENSG00000105290|ENST00000221891|APLP1;nc|ENSG00000105290|P51693|APLP1	35.61828744233558	0.47037581924408073	6				NaN	NaN	0	NaN	1597	2434	4029
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4034	15.366	NaN	5294	30	0	2146.8	0.106	+			41359	SVMAQVRQK	9	60	531.7881881932517	1061.5618234533033	2	531.7901000976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_SVM(Oxidation (M))AQVRQK_	ENSG00000038358|ENST00000358933|EDC4;ENST00000572067.1_1_16:67917790-67918048:+|nuORF;nc|ENSG00000038358|Q6P2E9-2|EDC4	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	1598	2434	4029
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4035	15.368	NaN	4139.5	30	0	822.26	0.106	+			1999	AKGRTVYLE	9	59	518.7912985781653	1035.5680442231305	2	518.793212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AKGRTVYLE_	GPX8|p.S61Y|2|0.28|ENSG00000164294|chr5:55160374-55160374|C/A|missense_variant	47.657333605630114	0.33044192980041115	6				NaN	NaN	0	NaN	1599	2434	4029
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4036	15.37	NaN	6655.4	30	0	1322	0.038				-1	RVSKCPAPATL	11	64	600.3317028897802	1198.6488528463603	2	600.333740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_RVSKC(Carbamidomethyl (C))PAPATL_	ENST00000523898.5_1_8:8860347-8860590:+|nuORF	61.691277971877994	0.30835813808799384	6				NaN	NaN	0	NaN	1600	2434	4029
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4054	15.408	NaN	110540	30	0	19876	0.166	+			20510	KFGQTDFKK	9	88	549.8002823565176	1097.5860117798352	2	549.8024291992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KFGQTDFKK_	ENST00000466764.5_1_X:48436119-48436305:+|nuORF	74.25504064058377	0.12238981753128622	6				NaN	NaN	0	NaN	1615	2437	4053
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4055	15.41	NaN	31584	30	0	8239.4	0.106	+			35368	SAPRHGSL	8	70	412.72225381265594	NaN	0	412.7221374511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAPRHGSL_	ENSG00000100316|ENST00000216146|RPL3;ENST00000460589.5_1_22:39713464-39715412:-|nuORF;ENST00000465618.5_1_22:39712851-39715803:-|nuORF;ENST00000484615.5_1_22:39713464-39715605:-|nuORF	60.11826168202944	1.7418937515398478	6				NaN	NaN	0	NaN	1616	2437	4053
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4056	15.413	NaN	13834	30	0	2411.1	0.106	+			3394	ASQEGTIQK	9	69	481.24988746246646	960.4852219917329	2	481.2508850097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASQEGTIQK_	ENSG00000172349|ENST00000683961|IL16;nc|ENSG00000172349|Q14005-2|IL16;nc|ENSG00000172349|Q14005-3|IL16;nc|ENSG00000172349|Q14005-4|IL16	142.36107225718385	0.009372392051035914	6				NaN	NaN	0	NaN	1617	2437	4053
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4057	15.414	NaN	20398	30	0	3623	0.106				-1	 	0	83	486.28374924205445	970.5529455509089	2	486.28509521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1618	2437	4053
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4058	15.416	NaN	39637	30	0	9581.1	0.106				-1	 	0	79	532.8070256521349	1063.5994983710698	2	532.808837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1619	2437	4053
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4059	15.418	NaN	13565	30	0	1953.6	0.106				-1	 	0	71	496.29111226402046	990.5676715948409	2	496.29254150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1620	2437	4053
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4060	15.42	NaN	11288	30	0	6233	0.039	+			43134	TESDAQRTMYP	11	68	649.7875603805751	1297.56056782795	2	649.7893676757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TESDAQRTMYP_	AKAP9|p.Q3083Nfs*28|1|0.15|ENSG00000127914|chr7:92089389-92089390|-/TGAATATCAAGCAGCTATGGAATGCC|frameshift_variant;AKAP9|p.T1942Lfs*3|3|0.18|ENSG00000127914|chr7:92062328-92062328|A/-|frameshift_variant;ENSG00000127914|ENST00000356239|AKAP9;ENST00000493453.1_1_7:91570251-91670224:+|nuORF;nc|ENSG00000127914|Q99996-1|AKAP9;nc|ENSG00000127914|Q99996-3|AKAP9;nc|ENSG00000127914|Q99996-4|AKAP9;nc|ENSG00000127914|Q99996-5|AKAP9;nc|ENSG00000127914|Q99996-6|AKAP9	65.46538089061403	0.2746690761028526	6				NaN	NaN	0	NaN	1621	2437	4053
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4078	15.454	NaN	1342300	30	0	394420	0.132				-1	 	0	103	334.5283578478379	1000.5632441437137	3	334.52960205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1636	2440	4077
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4079	15.456	NaN	107480	30	0	48966	0.063				-1	 	0	94	328.52491220691047	982.5529072209315	3	328.5259094238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1637	2440	4077
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4080	15.458	NaN	94058	30	0	9698.2	0.106				-1	 	0	105	515.3045259850112	1028.5944990368223	2	515.30615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1638	2440	4077
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4081	15.459	NaN	63888	30	0	6904.8	0.106				-1	 	0	100	414.25723069642817	826.4999084596564	2	414.2583923339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1639	2440	4077
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4082	15.461	NaN	82981	30	0	10144	0.106			+	19868	KEELTVLLQ	9	127	358.21345396192083	1071.6185324859625	3	358.2146301269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEELTVLLQ_	REV__ENST00000471771.5_1_13:28014269-28014434:-|nuORF	63.53385203322761	0.18415635464017938	6				NaN	NaN	0	NaN	1640	2440	4077
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4083	15.463	NaN	30003	30	0	6182.7	0.106			+	-1	IIMGFLKQ	8	77	322.5213923835446	964.5423477508339	3	322.52239990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_IIM(Oxidation (M))GFLKQ_	REV__ENSG00000058262|ENST00000243253|SEC61A1;REV__ENSG00000065665|ENST00000298428|SEC61A2;REV__ENST00000495368.1_1_10:12184516-12209761:+|nuORF;REV__nc|ENSG00000065665|Q9H9S3-2|SEC61A2;REV__nc|ENSG00000065665|Q9H9S3-3|SEC61A2;REV__SEC61A2|p.A387Kfs*3|1|0.04|ENSG00000065665|chr10:12161111-12161114|CAGC/-|frameshift_variant	30.503639358989545	0.7238069182250283	6				NaN	NaN	0	NaN	1641	2440	4077
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4084	15.465	NaN	31520	30	0	3670.4	0.106				-1	 	0	77	457.7731538845378	913.5317548358756	2	457.7742004394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1642	2440	4077
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4085	15.467	NaN	15495	30	0	3319.6	0.035			+	30116	PRPPSDDQK	9	55	520.2627991032522	1038.5110452733043	2	520.2642822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_PRPPSDDQK_	REV__ENSG00000133114|ENST00000379151|GPALPP1;REV__nc|ENSG00000133114|Q8IXQ4-4|GPALPP1	42.396135135203025	0.392153681582562	6				NaN	NaN	0	NaN	1643	2440	4077
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4096	15.491	NaN	36780	30	0	4590.5	0.198				-1	 	0	98	514.758032938935	1027.50151294467	2	514.7597045898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1651	2443	4095
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4097	15.494	NaN	66944	30	0	37071	0.106				-1	 	0	74	462.25449069156	922.4944284499201	2	462.25567626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1652	2443	4095
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4098	15.496	NaN	10140	30	0	3668.7	0.106			+	-1	ALEEVHALM	9	70	343.50773438464637	1027.5013737541392	3	343.50872802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_ALEEVHALM(Oxidation (M))_	REV__ENSG00000071655|ENST00000434436|MBD3;REV__ENST00000590830.5_1_19:1578341-1584901:-|nuORF;REV__nc|ENSG00000071655|O95983-2|MBD3	34.172542307311794	0.4838870758800184	6				NaN	NaN	0	NaN	1653	2443	4095
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4099	15.498	NaN	109740	30	0	15804	0.106	+			40498	STYGVTKGK	9	106	470.7581431961421	NaN	0	470.75830078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STYGVTKGK_	ENSG00000214753|ENST00000301785|HNRNPUL2	123.20810148215591	0.0016355521601317592	6				NaN	NaN	0	NaN	1654	2443	4095
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4100	15.5	NaN	7673.6	30	0	1380.5	0.106	+			17458	ICGARSWAE	9	65	496.7341726878815	991.453792442563	2	496.7357177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ICGARSWAE_	ENST00000449853.2_1_1:16935265-16939994:-|nuORF	79.45101966838831	0.09992237243120712	6				NaN	NaN	0	NaN	1655	2443	4095
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4101	15.501	NaN	9787.1	30	0	1415.9	0.106	+			22910	KVMTKVIKK	9	77	537.8555484587803	1073.6965439843605	2	537.8576049804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KVMTKVIKK_	ENSG00000168016|ENST00000645898|TRANK1;nc|ENSG00000168016|O15050|TRANK1;TRANK1|p.F2073Lfs*13|1|0.1|ENSG00000168016|chr3:36833232-36833232|A/-|frameshift_variant;TRANK1|p.P972Qfs*12|1|0.34|ENSG00000168016|chr3:36856675-36856675|G/-|frameshift_variant;TRANK1|p.V1077Wfs*30|1|0.29|ENSG00000168016|chr3:36856362-36856362|T/-|frameshift_variant	63.53385203322761	0.18415635464017938	6				NaN	NaN	0	NaN	1656	2443	4095
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4102	15.503	NaN	2609.5	30	0	454.65	0.033				-1	 	0	53	421.70825601760663	841.4019591020133	2	421.70941162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1657	2443	4095
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4120	15.539	NaN	74819	30	0	51955	0.197				-1	 	0	56	413.2255332408554	824.4365135485108	2	413.2265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1672	2446	4119
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4121	15.543	NaN	60138	30	0	12704	0.106			+	42623	TAVDLRPSY	9	83	511.2693266909399	1020.5241004486799	2	511.2707824707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAVDLRPSY_	REV__ENSG00000135333|ENST00000369303|EPHA7;REV__nc|ENSG00000135333|Q15375-2|EPHA7;REV__nc|ENSG00000135333|Q15375-4|EPHA7	71.29570347882199	0.13518600952103718	6				NaN	NaN	0	NaN	1673	2446	4119
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4122	15.545	NaN	8278.4	30	0	1860.1	0.106				-1	 	0	57	327.1834604655259	652.3523679978518	2	327.18438720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1674	2446	4119
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4123	15.547	NaN	17049	30	0	3516.4	0.106	+			32848	RCRDMLSQ	8	78	504.7408663399233	1007.4671797466466	2	504.7425537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RCRDMLSQ_	AIPL1|p.N325D|1|0.36|ENSG00000129221|chr17:6425642-6425642|T/C|missense_variant	79.45101966838831	0.3281480470254892	6				NaN	NaN	0	NaN	1675	2446	4119
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4124	15.548	NaN	9098.5	30	0	1359.1	0.106				-1	 	0	73	517.302078692017	1032.5896044508338	2	517.3037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1676	2446	4119
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4125	15.55	NaN	5824.2	30	0	1228.3	0.106			+	38347	SRLNRSCE	8	57	482.73614175371097	963.457730574222	2	482.73736572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SRLNRSCE_	REV__ENST00000550216.1_1_12:70636609-70636892:-|nuORF	27.882242232435846	0.7440473649773525	6				NaN	NaN	0	NaN	1677	2446	4119
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4126	15.552	NaN	7274.7	30	0	2369.7	0.036				-1	ERPSMVMR	8	58	341.16867502786897	1020.484195683807	3	341.1696472167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_ERPSMVM(Oxidation (M))R_	ENST00000427908.6_1_5:176737530-176738842:-|nuORF	23.04248740728303	0.7814162927298575	6				NaN	NaN	0	NaN	1678	2446	4119
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4144	15.589	NaN	26391	30	0	6897.7	0.214			+	7640	DKLQQSQKQ	9	71	551.796594969112	1101.578637005024	2	551.7985229492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DKLQQSQKQ_	REV__ENSG00000130695|ENST00000451429|CEP85;REV__nc|ENSG00000130695|Q6P2H3-4|CEP85;REV__nc|ENSG00000130695|Q6P2H3|CEP85	99.37495909608758	0.03983967222258828	6				NaN	NaN	0	NaN	1693	2449	4143
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4145	15.593	NaN	39360	30	0	5320.2	0.106			+	41173	SVKTTTTIVT	10	76	525.8049645891147	1049.5953762450292	2	525.806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVKTTTTIVT_	REV__ENSG00000124827|ENST00000379491|GCM2;REV__GCM2|p.A398Cfs*6|1|0.45|ENSG00000124827|chr6:10874325-10874326|-/G|frameshift_variant	58.2462437865262	0.38179041844353556	6				NaN	NaN	0	NaN	1694	2449	4143
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4146	15.595	NaN	23426	30	0	5957.5	0.106			+	36528	SFEQQDMKGDK	11	89	656.7956520732155	1311.5767512132309	2	656.797607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SFEQQDMKGDK_	REV__ENSG00000198399|ENST00000355123|ITSN2;REV__ENST00000407704.1_1_2:24534520-24550951:-|nuORF;REV__ITSN2|p.A1240Pfs*15|1|0.05|ENSG00000198399|chr2:24217995-24217996|-/AAGGG|frameshift_variant;REV__ITSN2|p.A1583Pfs*86|1|0.25|ENSG00000198399|chr2:24205230-24205230|T/-|frameshift_variant;REV__ITSN2|p.F1478Qfs*12|1|0.3|ENSG00000198399|chr2:24209858-24209859|AA/-|frameshift_variant;REV__ITSN2|p.T790Nfs*11|1|0.43|ENSG00000198399|chr2:24261729-24261730|-/T|frameshift_variant;REV__nc|ENSG00000198399|Q9NZM3-2|ITSN2;REV__nc|ENSG00000198399|Q9NZM3-3|ITSN2;REV__nc|ENSG00000198399|Q9NZM3-4|ITSN2	41.1089822145965	0.5427687864994973	6				NaN	NaN	0	NaN	1695	2449	4143
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4147	15.597	NaN	37552	30	0	6284	0.106				-1	 	0	86	517.2657228639766	1032.5168927947532	2	517.2673950195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1696	2449	4143
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4148	15.599	NaN	5117.8	30	0	498.45	0.106				-1	 	0	66	491.2815271456534	980.5485013581068	2	491.2826232910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1697	2449	4143
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4149	15.6	NaN	14778	30	0	1918	0.04				-1	CTYRALDGDLE	11	67	438.2006763497082	NaN	0	438.2006530761719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_C(Carbamidomethyl (C))TYRALDGDLE_	CD22|p.L742Sfs*14|1|0.29|ENSG00000012124|chr19:35345612-35345612|C/-|frameshift_variant;ENSG00000012124|ENST00000085219|CD22;ENST00000602224.5_1_19:35823460-35823868:+|nuORF;nc|ENSG00000012124|P20273-2|CD22;nc|ENSG00000012124|P20273-3|CD22;nc|ENSG00000012124|P20273-4|CD22	44.639436926238396	0.3538202969592268	6				NaN	NaN	0	NaN	1698	2449	4143
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4150	15.601	NaN	5569.6	30	0	665.16	0.14	+			35994	SEHSHSTTL	9	66	499.7292353373082	997.4439177414164	2	499.73028564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SEHSHSTTL_	ENSG00000132470|ENST00000200181|ITGB4;ITGB4|p.T1720Rfs*13|1|0.05|ENSG00000132470|chr17:75757046-75757052|GACCACT/-|frameshift_variant;nc|ENSG00000132470|P16144-2|ITGB4;nc|ENSG00000132470|P16144-3|ITGB4;nc|ENSG00000132470|P16144-4|ITGB4	79.45101966838831	0.09992237243120712	6				NaN	NaN	0	NaN	1699	2449	4143
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4168	15.641	NaN	85239	30	0	16153	0.214				-1	 	0	120	471.2729047303043	940.5312565274086	2	471.2741394042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1714	2452	4167
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4169	15.644	NaN	79306	30	0	23374	0.106	+			41609	SVQHVDAAEK	10	86	361.8514804018197	1082.5326118056591	3	361.8524169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVQHVDAAEK_	ENST00000585682.5_1_4:159092526-159092595:-|nuORF	66.9202029811203	0.3029018092171124	6				NaN	NaN	0	NaN	1715	2452	4167
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4170	15.646	NaN	13865	30	0	4169.5	0.106	+			7132	DAATIPSSAMQ	11	74	554.2528117239933	1106.4910705147865	2	554.2550048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_DAATIPSSAM(Oxidation (M))Q_	ENSG00000010803|ENST00000695335|SCMH1;nc|ENSG00000010803|Q96GD3-2|SCMH1;nc|ENSG00000010803|Q96GD3-3|SCMH1;nc|ENSG00000010803|Q96GD3-4|SCMH1;nc|ENSG00000010803|Q96GD3-5|SCMH1;nc|ENSG00000010803|Q96GD3-6|SCMH1;nc|ENSG00000010803|Q96GD3|SCMH1	93.1432384553994	0.08590712355761482	6				NaN	NaN	0	NaN	1716	2452	4167
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4171	15.648	NaN	10403	30	0	1722.8	0.106	+			45783	VAGGRGRARS	10	64	493.7836024433155	985.552651953431	2	493.7850036621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VAGGRGRARS_	ENST00000447274.6_1_11:67056665-67056920:+|nuORF	71.87747018426188	0.26198133118427214	6				NaN	NaN	0	NaN	1717	2452	4167
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4172	15.65	NaN	20789	30	0	2269.5	0.106			+	30770	QDRGRNVR	8	89	500.77331807901146	999.5320832248229	2	500.77508544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QDRGRNVR_	REV__ENSG00000143375|ENST00000271636|CGN	49.44154591367651	0.597725784090933	6				NaN	NaN	0	NaN	1718	2452	4167
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4173	15.652	NaN	5854.7	30	0	1492.1	0.035			+	17851	IFRGMQIQ	8	64	496.7708288643841	991.5271047955682	2	496.7722473144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IFRGMQIQ_	REV__ENSG00000136051|ENST00000332180|WASHC4;REV__ENST00000311317.8_1_12:105501518-105541426:+|nuORF;REV__nc|ENSG00000136051|Q2M389-2|WASHC4	68.484700416344	0.4195245774506064	6				NaN	NaN	0	NaN	1719	2452	4167
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4174	15.652	NaN	6298.9	30	0	637.7	0.141				-1	 	0	69	543.815443000336	1085.616333067472	2	543.8174438476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1720	2452	4167
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4192	15.692	NaN	1168400	30	0	294590	0.053				-1	KEEMLRRL	8	104	545.8064809190606	1089.5984089049211	2	545.8088989257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_KEEM(Oxidation (M))LRRL_	tr|U7T4Y7|U7T4Y7_FUSNUPeptide/nickeltransportsystempermeaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00608PE=3SV=1	73.97473282117947	0.3737790450121076	6				NaN	NaN	0	NaN	1735	2455	4191
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4193	15.693	NaN	413840	30	0	202680	0.106				-1	AKVKVMAAWA	10	67	364.20697753104884	1089.5991031933465	3	364.2083740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_AKVKVM(Oxidation (M))AAWA_	CCDC71|p.A333V|1|0.19|ENSG00000177352|chr3:49163211-49163211|G/A|missense_variant	42.86426827375447	0.522752283233888	6				NaN	NaN	0	NaN	1736	2455	4191
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4194	15.695	NaN	38976	30	0	5788.4	0.106				-1	 	0	97	501.30715317117745	1000.5997534091549	2	501.3085632324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1737	2455	4191
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4195	15.697	NaN	19663	30	0	2160.1	0.106	+			35976	SEGTKAVTK	9	87	460.75438028051315	919.4942076278263	2	460.7558898925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SEGTKAVTK_	ENSG00000124635|ENST00000339812|H2BC11;ENSG00000146047|ENST00000274764|H2BC1;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000196890|ENST00000693095|H2BC26;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000369385.5_1_1:149814898-149814982:+|nuORF;ENST00000436555.1_1_1:228651916-228652012:-|nuORF;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;HIST1H2BD|p.Y122H|1|0.36|ENSG00000158373|chr6:26158533-26158533|T/C|missense_variant;nc|ENSG00000203814|Q5QNW6-2|H2BC18;nc|ENSG00000285480|A0A2R8Y619|H2BK1	182.3913890336628	0.0010559746847940753	6				NaN	NaN	0	NaN	1738	2455	4191
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4196	15.698	NaN	19788	30	0	6587.7	0.106			+	6233	AVSCLLIII	9	80	334.54047671514627	1000.5996007456388	3	334.5415344238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_AVSC(Carbamidomethyl (C))LLIII_	REV__ENSG00000100652|ENST00000216540|SLC10A1	53.351449002276354	0.2690372970092375	6				NaN	NaN	0	NaN	1739	2455	4191
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4197	15.7	NaN	29845	30	0	20867	0.106	+			31062	QEYHIQQNE	9	57	594.7674712550597	1187.5203895769193	2	594.7692260742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QEYHIQQNE_	ENSG00000100575|ENST00000395159|TIMM9	26.69291269510374	0.5537881896960711	6				NaN	NaN	0	NaN	1740	2455	4191
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4198	15.702	NaN	14453	30	0	2922.5	0.106				-1	LGKEKLHCQ	9	82	556.7977545322187	1111.5809561312374	2	556.7996826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_LGKEKLHC(Carbamidomethyl (C))Q_	sp|P16786|UL49_HCMVAUncharacterizedproteinUL49OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL49PE=3SV=1;sp|Q6SW82|UL49_HCMVMProteinUL49OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL49PE=3SV=1	56.72105179125745	0.24094814563026265	6				NaN	NaN	0	NaN	1741	2455	4191
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4199	15.704	NaN	4855.1	30	0	1414	0.034	+			19584	KDCLLTSVS	9	55	483.25205249447663	964.4895520557533	2	483.2532653808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_KDCLLTSVS_	ENSG00000166927|ENST00000300184|MS4A7;ENST00000528808.1_1_11:60150614-60157189:+|nuORF;nc|ENSG00000166927|Q9GZW8-2|MS4A7	32.81241826257853	0.4965981579233955	6				NaN	NaN	0	NaN	1742	2455	4191
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4217	15.741	NaN	429930	30	0	93155	0.139			+	-1	QERYVLMDQGD	11	106	685.3065720723457	1368.5985912114913	2	685.3079833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_QERYVLM(Oxidation (M))DQGD_	REV__ENST00000437318.5_1_15:20588586-20648641:-|nuORF	51.52775601994872	0.4002081502334604	6				NaN	NaN	0	NaN	1757	2458	4216
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4218	15.744	NaN	21277	30	0	9832.3	0.106			+	-1	SPMCRCCNNFY	11	79	734.2687541797156	NaN	0	734.2688598632812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C),Oxidation (M)	_SPM(Oxidation (M))CRC(Carbamidomethyl (C))C(Carbamidomethyl (C))NNFY_	REV__ENSG00000186153|ENST00000566780|WWOX;REV__ENST00000569332.5_1_16:78133625-79245690:+|nuORF;REV__nc|ENSG00000186153|Q9NZC7-5|WWOX	14.864876125193954	0.456735970842152	6				NaN	NaN	0	NaN	1758	2458	4216
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4219	15.746	NaN	38126	30	0	5574.3	0.106			+	-1	MDPYEVNSV	9	81	535.2293818862365	1068.444210839273	2	535.2312622070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))DPYEVNSV_	REV__ENSG00000048707|ENST00000620676|VPS13D;REV__nc|ENSG00000048707|Q5THJ4-2|VPS13D;REV__VPS13D|p.K3964Nfs*34|1|0.09|ENSG00000048707|chr1:12403831-12403831|A/-|frameshift_variant	58.78195531508484	0.22376836668196862	6				NaN	NaN	0	NaN	1759	2458	4216
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4220	15.748	NaN	5561	30	0	839.46	0.106	+			18666	ISWARTKK	8	66	495.29826228726034	988.5819716413207	2	495.29974365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ISWARTKK_	CTPS2|p.L488Pfs*6|1|0.03|ENSG00000047230|chrX:16617235-16617236|-/A|frameshift_variant;ENSG00000047230|ENST00000359276|CTPS2	44.116797842482775	0.6307669463330267	6				NaN	NaN	0	NaN	1760	2458	4216
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4221	15.749	NaN	5993.4	30	0	1562.5	0.106			+	6269	AVSLKRKMG	9	57	330.534474362574	988.5815936879219	3	330.5355529785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVSLKRKMG_	REV__ABCA2|p.G2110Afs*11|1|0.41|ENSG00000107331|chr9:137010217-137010217|C/-|frameshift_variant;REV__ENSG00000107331|ENST00000341511|ABCA2;REV__ENST00000459850.5_1_9:139905575-139923366:-|nuORF;REV__ENST00000487109.5_1_9:139906084-139911410:-|nuORF;REV__nc|ENSG00000107331|Q9BZC7-2|ABCA2;REV__nc|ENSG00000107331|Q9BZC7-4|ABCA2;REV__nc|ENSG00000107331|Q9BZC7|ABCA2	26.69291269510374	0.5537881896960711	6				NaN	NaN	0	NaN	1761	2458	4216
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4222	15.751	NaN	8861.8	30	0	961.2	0.106			+	31089	QFLDHNYEYY	10	83	696.2972122581796	1390.579871583159	2	696.299072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QFLDHNYEYY_	REV__ENSG00000151748|ENST00000324679|SAV1;REV__SAV1|p.A185Vfs*10|1|0.1|ENSG00000151748|chr14:50644996-50644997|-/ATCA|frameshift_variant	30.317721548370564	0.6322445173429027	6				NaN	NaN	0	NaN	1762	2458	4216
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4223	15.753	NaN	4396.4	30	0	305.74	0.036	+			26333	LSWLQVKKA	9	58	358.220458984375	NaN	0	358.220458984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSWLQVKKA_	ENST00000546531.5_1_12:49396684-49399341:-|nuORF	40.77816245573522	0.2702456086868081	6				NaN	NaN	0	NaN	1763	2458	4216
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4241	15.791	NaN	47292	30	0	6274.9	0.214	+			14001	GSEEPEEKK	9	91	516.7464702348493	1031.4783875364985	2	516.748291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSEEPEEKK_	ENSG00000185246|ENST00000355765|PRPF39;ENST00000424478.5_1_14:45565874-45584113:+|nuORF;ENST00000554785.1_1_14:45579308-45583868:+|nuORF;nc|ENSG00000185246|Q86UA1-2|PRPF39	82.24051045832904	0.08786059719216216	6				NaN	NaN	0	NaN	1778	2461	4240
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4242	15.794	NaN	31036	30	0	8490.2	0.106				-1	 	0	83	498.7938807755489	995.5732086178979	2	498.79534912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1779	2461	4240
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4243	15.796	NaN	8929	30	0	1789.5	0.106	+			18920	IVNASTTNK	9	63	474.25991131346996	946.5052696937399	2	474.26116943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IVNASTTNK_	ENSG00000078269|ENST00000355585|SYNJ2;nc|ENSG00000078269|O15056-2|SYNJ2;nc|ENSG00000078269|O15056-3|SYNJ2;SYNJ2|p.L1226Tfs*32|1|0.22|ENSG00000078269|chr6:158093029-158093030|-/C|frameshift_variant;SYNJ2|p.P1225Hfs*19|1|0.23|ENSG00000078269|chr6:158093030-158093030|C/-|frameshift_variant	66.96192283764107	0.15557981141143568	6				NaN	NaN	0	NaN	1780	2461	4240
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4244	15.798	NaN	10235	30	0	1777.1	0.106	+			14515	GTDEHVVCK	9	76	522.7428852592965	NaN	0	522.742919921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_GTDEHVVC(Carbamidomethyl (C))K_	nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM	143.8867514904718	0.0011190321609884162	6				NaN	NaN	0	NaN	1781	2461	4240
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4245	15.8	NaN	11998	30	0	3261.3	0.106				-1	 	0	65	440.23648595129436	878.4584189693887	2	440.23760986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1782	2461	4240
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4246	15.802	NaN	4262.3	30	0	411.83	0.037	+			16336	HEKSCDVKM	9	71	567.2557315469636	1132.496910160727	2	567.2579345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_HEKSC(Carbamidomethyl (C))DVKM_	ENSG00000130165|ENST00000252445|ELOF1	56.43379154798735	0.2433427591689151	6				NaN	NaN	0	NaN	1783	2461	4240
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4247	15.802	NaN	16928	30	0	7356.2	0.146	+			25287	LNSTAKKWLQ	10	80	396.89587488332745	1187.6657952501823	3	396.8970947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LNSTAKKWLQ_	ENST00000425424.3_1_6:31731928-31732414:+|nuORF;ENST00000476085.1_3_6:31731200-31732414:+|nuORF	50.033510581677724	0.4566913063131936	6				NaN	NaN	0	NaN	1784	2461	4240
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4265	15.842	NaN	35692	30	0	12668	0.215			+	1577	AGIGARSSVEK	11	79	358.8684283769353	1073.5834557310059	3	358.86968994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AGIGARSSVEK_	REV__ENST00000328249.3_2_1:43295744-43296215:+|nuORF	65.46538089061403	0.2746690761028526	6				NaN	NaN	0	NaN	1799	2464	4264
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4266	15.846	NaN	28883	30	0	10913	0.106			+	-1	PILGSWMVKGD	11	96	406.87777044757837	1217.6114819429351	3	406.87908935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_PILGSWM(Oxidation (M))VKGD_	REV__CSMD3|p.A3641Cfs*13|1|0.36|ENSG00000164796|chr8:112228799-112228800|-/A|frameshift_variant;REV__CSMD3|p.F3640Lfs*61|7|0.35|ENSG00000164796|chr8:112228800-112228800|A/-|frameshift_variant;REV__CSMD3|p.G3063Rfs*5|1|0.06|ENSG00000164796|chr8:112287208-112287209|-/G|frameshift_variant;REV__CSMD3|p.L2190Yfs*46|1|0.29|ENSG00000164796|chr8:112341560-112341560|A/-|frameshift_variant;REV__CSMD3|p.S2534Ifs*8|1|0.04|ENSG00000164796|chr8:112314002-112314003|-/GACACTAT|frameshift_variant;REV__ENSG00000164796|ENST00000297405|CSMD3;REV__nc|ENSG00000164796|Q7Z407-2|CSMD3;REV__nc|ENSG00000164796|Q7Z407-3|CSMD3;REV__nc|ENSG00000164796|Q7Z407-4|CSMD3;REV__nc|ENSG00000164796|Q7Z407-5|CSMD3	29.550750289552195	0.6798279264880025	6				NaN	NaN	0	NaN	1800	2464	4264
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4267	15.848	NaN	8722.6	30	0	1267.2	0.106			+	-1	MDALLVGLAQ	10	65	349.5258234796285	NaN	0	349.52581787109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))DALLVGLAQ_	REV__WDR81|p.E780D|1|0.42|ENSG00000167716|chr17:1727299-1727299|G/T|missense_variant	47.95952297671804	0.31850267256932663	6				NaN	NaN	0	NaN	1801	2464	4264
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4268	15.849	NaN	12268	30	0	2652.6	0.106				-1	 	0	73	553.3442075006886	1104.6738620681772	2	553.3463134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1802	2464	4264
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4269	15.851	NaN	13405	30	0	1584.2	0.106	+			21534	KNSMCRAR	8	73	483.2422127810236	964.4698726288473	2	483.243408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KNSMCRAR_	TRIM45|p.K472Rfs*24|1|0.12|ENSG00000134253|chr1:117115629-117115629|G/-|frameshift_variant	63.30626980617807	0.4690498839812213	6				NaN	NaN	0	NaN	1803	2464	4264
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4270	15.853	NaN	7131.1	30	0	2364	0.038			+	-1	HTMIKLESML	10	83	609.8130760971047	1217.6115992610094	2	609.815185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_HTM(Oxidation (M))IKLESML_	REV__ENSG00000134853|ENST00000257290|PDGFRA;REV__ENST00000461294.2_1_4:55143562-55144193:+|nuORF;REV__ENST00000507536.1_1_4:55143544-55147845:+|nuORF;REV__ENST00000509092.5_1_4:55124935-55146696:+|nuORF;REV__nc|ENSG00000134853|P16234-3|PDGFRA;REV__PDGFRA|p.N780Tfs*17|1|0.45|ENSG00000134853|chr4:54285382-54285382|A/-|frameshift_variant	32.81241826257853	0.6118718159329168	6				NaN	NaN	0	NaN	1804	2464	4264
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4271	15.854	NaN	6953.3	30	0	1134.2	0.141	+			13260	GISAFLMQK	9	68	497.77423095703125	NaN	0	497.77423095703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GISAFLMQK_	ENSG00000006007|ENST00000353258|GDE1;ENST00000563645.1_1_16:19514794-19516450:-|nuORF	58.78195531508484	0.1545138866451181	6				NaN	NaN	0	NaN	1805	2464	4264
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4289	15.89	NaN	34795	30	0	6840.2	0.214			+	50031	WDRGCVTVK	9	89	532.2709678288476	1062.527382724495	2	532.2727661132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WDRGCVTVK_	REV__ENST00000532611.1_1_11:67050652-67051295:+|nuORF	87.69643885390035	0.07135982304947239	6				NaN	NaN	0	NaN	1820	2467	4288
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4290	15.893	NaN	28984	30	0	19667	0.106				-1	 	0	49	413.2255332408554	824.4365135485108	2	413.2266845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1821	2467	4288
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4291	15.895	NaN	27159	30	0	3562.9	0.106	+			39054	SSSPVNVKK	9	84	473.2708480330759	944.5271431329518	2	473.27154541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSSPVNVKK_	ENSG00000153187|ENST00000640218|HNRNPU;ENST00000476241.2_2_1:245025757-245027609:-|nuORF;nc|ENSG00000153187|Q00839-2|HNRNPU	93.1432384553994	0.056003526918089595	6				NaN	NaN	0	NaN	1822	2467	4288
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4292	15.897	NaN	5216.2	30	0	955.64	0.106			+	-1	LCTRRPPG	8	58	478.75872802734375	NaN	0	478.75872802734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_LC(Carbamidomethyl (C))TRRPPG_	REV__FBXL19|p.P205Rfs*26|1|0.25|ENSG00000099364|chr16:30927880-30927880|G/-|frameshift_variant	25.450171626174864	1.7418937515398478	6				NaN	NaN	0	NaN	1823	2467	4288
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4293	15.899	NaN	12662	30	0	903.8	0.106	+			44610	TTDRYVQQK	9	83	569.7960455416309	NaN	0	569.79638671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TTDRYVQQK_	ENSG00000057935|ENST00000405094|MTA3;ENSG00000182979|ENST00000331320|MTA1;ENST00000472767.5_1_2:42922919-42924972:+|nuORF;ENST00000475383.5_1_2:42922919-42935079:+|nuORF;MTA1|p.R546Afs*8|1|0.13|ENSG00000182979|chr14:105466433-105466433|C/-|frameshift_variant;MTA1|p.T578Pfs*18|1|0.07|ENSG00000182979|chr14:105466528-105466528|C/-|frameshift_variant;MTA3|p.G456Lfs*48|1|0.05|ENSG00000057935|chr2:42708935-42708936|-/ATTACTG|frameshift_variant;nc|ENSG00000057935|Q9BTC8-2|MTA3;nc|ENSG00000182979|Q13330-2|MTA1;nc|ENSG00000182979|Q13330-3|MTA1	132.757866228626	0.00016231815605623974	6				NaN	NaN	0	NaN	1824	2467	4288
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4294	15.901	NaN	2420.7	30	0	467.02	0.03				-1	 	0	41	327.1834604655259	652.3523679978518	2	327.1844177246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1825	2467	4288
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4295	15.901	NaN	3375.8	30	0	380.5	0.139			+	25002	LLFCFVAR	8	63	484.7737826287965	NaN	0	484.7615051269531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LLFCFVAR_	REV__ENST00000607738.1_1_20:32251806-32252016:+|nuORF	29.841539824830324	1.7418937515398478	6				NaN	NaN	0	NaN	1826	2467	4288
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4313	15.941	NaN	149860	30	0	59896	0.214	+			24403	LGAGGGRAGPR	11	91	323.5176241210743	967.5310429634228	3	323.5185241699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LGAGGGRAGPR_	ENST00000260247.9_1_11:102962671-102962878:-|nuORF	27.882242232435846	0.6973292152807183	6				NaN	NaN	0	NaN	1841	2470	4312
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4314	15.944	NaN	34635	30	0	5868.5	0.106	+			38632	SSHLLEQTLD	10	88	571.7886925000945	1141.562832066989	2	571.7907104492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSHLLEQTLD_	INTS4|p.F316L|1|0.46|ENSG00000149262|chr11:77941222-77941222|G/T|missense_variant	61.691277971877994	0.35045824941635534	6				NaN	NaN	0	NaN	1842	2470	4312
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4315	15.947	NaN	11218	30	0	1114.3	0.106	+			31260	QHQRGRSKR	9	81	576.8261919028212	1151.6378308724422	2	576.828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QHQRGRSKR_	ENST00000525109.1_1_15:66585988-66599106:+|nuORF	78.26377905018397	0.10505600812668463	6				NaN	NaN	0	NaN	1843	2470	4312
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4316	15.948	NaN	9993.2	30	0	3220	0.106	+			4908	ATQKPLVSK	9	79	486.2963166773745	970.578080421549	2	486.29766845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATQKPLVSK_	ENSG00000159166|ENST00000391967|LAD1;LAD1|p.G152Afs*67|1|0.17|ENSG00000159166|chr1:201386906-201386906|C/-|frameshift_variant	54.722347961057174	0.257609425301511	6				NaN	NaN	0	NaN	1844	2470	4312
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4317	15.95	NaN	13793	30	0	1527.2	0.106				-1	MQIYGEKGK	9	77	535.2732001308771	NaN	0	535.273193359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_M(Oxidation (M))QIYGEKGK_	ENSG00000167210|ENST00000642948|LOXHD1;ENST00000335730.6_1_18:44089558-44181581:-|nuORF;nc|ENSG00000167210|Q8IVV2|LOXHD1	46.45678178249821	0.2311111838007999	6				NaN	NaN	0	NaN	1845	2470	4312
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4318	15.952	NaN	5579.2	30	0	1488.8	0.035	+			31624	QMERLAPGP	9	67	499.7604106213181	NaN	0	499.7609558105469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QMERLAPGP_	ARHGAP40|p.K441Sfs*20|1|0.15|ENSG00000124143|chr20:38643815-38643815|C/-|frameshift_variant;ENSG00000124143|ENST00000373345|ARHGAP40	58.78195531508484	0.1545138866451181	6				NaN	NaN	0	NaN	1846	2470	4312
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4319	15.953	NaN	21638	30	0	8942.1	0.14				-1	LLTMEEIQ	8	64	496.75186262302134	991.4891723128427	2	496.753173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_LLTM(Oxidation (M))EEIQ_	ENSG00000173020|ENST00000308595|GRK2;ENST00000416281.6_1_11:67049840-67052918:+|nuORF;ENST00000524899.1_1_11:67052494-67052918:+|nuORF	24.20275056022122	0.7724576178584145	6				NaN	NaN	0	NaN	1847	2470	4312
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4337	15.99	NaN	14897	30	0	5776.8	0.214	+			6352	AVTRTTPVK	9	55	324.86523228767066	971.5738674632121	3	324.8661193847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVTRTTPVK_	ENST00000395472.2_1_14:55494079-55509730:+|nuORF;ENST00000553735.1_1_14:55494079-55498700:+|nuORF;ENST00000555846.1_1_14:55494079-55498626:+|nuORF	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	1862	2473	4336
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4338	15.994	NaN	9195.3	30	0	1253.4	0.106			+	21879	KRNRRTKK	8	73	543.8517707216504	1085.6889885101007	2	543.853759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KRNRRTKK_	REV__CHD7|p.D652Tfs*59|2|0.28|ENSG00000171316|chr8:60781281-60781281|A/-|frameshift_variant	68.78682469695295	0.41700713582915416	6				NaN	NaN	0	NaN	1863	2473	4336
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4339	15.996	NaN	6082.2	30	0	1405.6	0.106			+	9508	EKVIIMLIK	9	61	362.90355386624424	1085.6888321989327	3	362.9046936035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EKVIIMLIK_	REV__ENST00000361690.7_1_6:35856682-35888302:-|nuORF	27.047317107675042	0.5504760921104335	6				NaN	NaN	0	NaN	1864	2473	4336
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4340	15.998	NaN	14697	30	0	4166.2	0.106			+	-1	LFCILLSIK	9	65	369.55972946144453	1105.6573589845336	3	369.5609130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_LFC(Carbamidomethyl (C))ILLSIK_	REV__ENST00000254799.10_1_4:71685687-71685810:-|nuORF	35.15202426646627	0.4747332964206883	6				NaN	NaN	0	NaN	1865	2473	4336
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4341	15.999	NaN	18694	30	0	1612.1	0.106	+			46308	VEKETQEKM	9	79	561.2770297316524	1120.5395065301047	2	561.2794799804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VEKETQEKM_	ENSG00000136888|ENST00000374050|ATP6V1G1	114.85826248499774	0.024312442104607014	6				NaN	NaN	0	NaN	1866	2473	4336
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4342	16.001	NaN	8057.2	30	0	1777.8	0.04			+	-1	MCEELGINVLM	11	50	670.799103335619	1339.5836537380378	2	670.80078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),2 Oxidation (M)	_M(Oxidation (M))C(Carbamidomethyl (C))EELGINVLM(Oxidation (M))_	REV__ENSG00000179873|ENST00000589093|NLRP11;REV__nc|ENSG00000179873|P59045-2|NLRP11;REV__nc|ENSG00000179873|P59045-3|NLRP11	23.52269567125451	0.7430573033454468	6				NaN	NaN	0	NaN	1867	2473	4336
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4343	16.002	NaN	1120.1	30	0	139.04	0.14				-1	 	0	36	399.7201962262629	797.4258395193258	2	399.72149658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1868	2473	4336
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4361	16.041	NaN	130500	30	0	19165	0.148	+			40700	SVAWACKVR	9	91	510.2759969495299	1018.5374409658598	2	510.27740478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVAWACKVR_	ENST00000483512.5_1_1:224622786-224703543:+|nuORF;ENST00000498126.5_1_1:224622786-224703543:+|nuORF	71.29570347882199	0.13518600952103718	6				NaN	NaN	0	NaN	1883	2476	4360
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4362	16.044	NaN	20906	30	0	7248.3	0.106	+			34252	RTGRITVEK	9	81	530.3156658961568	1058.6167788591135	2	530.3171997070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RTGRITVEK_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	59.93077597824379	0.21419174904018318	6				NaN	NaN	0	NaN	1884	2476	4360
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4363	16.046	NaN	14764	30	0	5105.9	0.106			+	-1	CPILKITSK	9	68	353.8793010389189	1058.6160737169569	3	353.8804016113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_C(Carbamidomethyl (C))PILKITSK_	REV__tr|U7SRQ3|U7SRQ3_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01623PE=4SV=1	29.170058357718403	0.5306379469863586	6				NaN	NaN	0	NaN	1885	2476	4360
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4364	16.048	NaN	6407.2	30	0	1121.7	0.106				-1	 	0	55	380.18397435448065	758.3533957757613	2	380.1851501464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1886	2476	4360
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4365	16.049	NaN	7567.2	30	0	1189.4	0.106	+			37636	SLQKFSSLPA	10	71	539.300621180439	1076.5866894276778	2	539.3025512695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SLQKFSSLPA_	ENSG00000139364|ENST00000682704|TMEM132B;nc|ENSG00000139364|Q14DG7-2|TMEM132B;nc|ENSG00000139364|Q14DG7|TMEM132B;TMEM132B|p.F483Lfs*2|1|0.26|ENSG00000139364|chr12:125644098-125644098|T/-|frameshift_variant;TMEM132B|p.Q99Rfs*5|2|0.35|ENSG00000139364|chr12:125349690-125349690|C/-|frameshift_variant	79.71258880314673	0.19796908725841375	6				NaN	NaN	0	NaN	1887	2476	4360
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4366	16.051	NaN	4409.8	30	0	597.47	0.106			+	36920	SIKDCLKTI	9	60	359.8704079212642	NaN	0	359.87042236328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_SIKDC(Carbamidomethyl (C))LKTI_	REV__ENSG00000186532|ENST00000305513|SMYD4	52.936696900407355	0.1864545979552969	6				NaN	NaN	0	NaN	1888	2476	4360
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4367	16.053	NaN	7000.9	30	0	1652.2	0.035	+			16063	HAYEHSLGK	9	67	521.258777644946	1040.503002356692	2	521.26025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HAYEHSLGK_	ENSG00000105355|ENST00000221957|PLIN3;nc|ENSG00000105355|O60664-2|PLIN3;nc|ENSG00000105355|O60664-3|PLIN3;nc|ENSG00000105355|O60664-4|PLIN3	74.25504064058377	0.12238981753128622	6				NaN	NaN	0	NaN	1889	2476	4360
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4385	16.091	NaN	7880.8	30	0	1546.6	0.214	+			4980	ATQVVVEKK	9	61	501.3016757721311	1000.5887986110622	2	501.3032531738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATQVVVEKK_	ENSG00000204394|ENST00000375663|VARS1;nc|ENSG00000204394|P26640-2|VARS1;VARS|p.A620Pfs*25|1|0.23|ENSG00000204394|chr6:31782750-31782750|C/-|frameshift_variant;VARS|p.L801Wfs*10|1|0.3|ENSG00000204394|chr6:31781707-31781707|A/-|frameshift_variant	146.78539889680295	0.007618400906539062	6				NaN	NaN	0	NaN	1904	2479	4384
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4386	16.094	NaN	14478	30	0	2606	0.106	+			6559	AYKKTHETL	9	72	545.797274722648	1089.579996512096	2	545.799072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AYKKTHETL_	ENSG00000111907|ENST00000534000|TPD52L1;ENST00000392483.6_1_6:125475019-125569560:+|nuORF;ENST00000532978.5_1_6:125475518-125573183:+|nuORF;nc|ENSG00000111907|Q16890-2|TPD52L1;nc|ENSG00000111907|Q16890-3|TPD52L1;nc|ENSG00000111907|Q16890-4|TPD52L1;nc|ENSG00000111907|Q16890-5|TPD52L1	93.1432384553994	0.056003526918089595	6				NaN	NaN	0	NaN	1905	2479	4384
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4387	16.096	NaN	8091	30	0	927.48	0.106	+			27372	MKDVYEKNPQ	10	83	626.3059991416803	1250.5974453501606	2	626.30810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MKDVYEKNPQ_	ENSG00000137942|ENST00000271234|FNBP1L;nc|ENSG00000137942|Q5T0N5-2|FNBP1L;nc|ENSG00000137942|Q5T0N5-3|FNBP1L;nc|ENSG00000137942|Q5T0N5-4|FNBP1L;nc|ENSG00000137942|Q5T0N5-5|FNBP1L	93.5975768576971	0.11047702954938905	6				NaN	NaN	0	NaN	1906	2479	4384
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4388	16.098	NaN	4944	30	0	515.84	0.106	+			20318	KEQEQAQKL	9	69	551.2972918292311	1100.580030725262	2	551.2998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEQEQAQKL_	ENSG00000136021|ENST00000360820|SCYL2	77.31757898189308	0.1091473830098891	6				NaN	NaN	0	NaN	1907	2479	4384
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4389	16.1	NaN	4550	30	0	1278	0.106				-1	 	0	64	481.2498519854538	960.4851510377076	2	481.25103759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1908	2479	4384
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4390	16.102	NaN	4102.6	30	0	480.89	0.037			+	-1	VVDCGYQCNA	10	74	593.236679023976	1184.4588051147518	2	593.2389526367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Carbamidomethyl (C)	_VVDC(Carbamidomethyl (C))GYQC(Carbamidomethyl (C))NA_	REV__ENSG00000168743|ENST00000379987|NPNT;REV__nc|ENSG00000168743|Q6UXI9-2|NPNT;REV__nc|ENSG00000168743|Q6UXI9-3|NPNT;REV__nc|ENSG00000168743|Q6UXI9-4|NPNT;REV__nc|ENSG00000168743|Q6UXI9-5|NPNT;REV__nc|ENSG00000168743|Q6UXI9-6|NPNT;REV__NPNT|p.R542Gfs*10|1|0.43|ENSG00000168743|chr4:105968911-105968911|A/-|frameshift_variant	45.97224482568171	0.49411383603842696	6				NaN	NaN	0	NaN	1909	2479	4384
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4391	16.102	NaN	4244.9	30	0	317.45	0.141	+			16304	HEHPVNKI	8	73	487.2634393844163	972.5123258356326	2	487.2644958496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HEHPVNKI_	DAB2|p.F398Lfs*15|1|0.36|ENSG00000153071|chr5:39382765-39382765|A/-|frameshift_variant;ENSG00000153071|ENST00000320816|DAB2;nc|ENSG00000153071|P98082-2|DAB2;nc|ENSG00000153071|P98082-3|DAB2	77.31757898189308	0.345924878368729	6				NaN	NaN	0	NaN	1910	2479	4384
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4409	16.142	NaN	14618	30	0	3589.8	0.215			+	13067	GFGGGAGLHNP	11	81	492.2384476342019	982.4623423352039	2	492.2398376464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GFGGGAGLHNP_	REV__ENSG00000205560|ENST00000312108|CPT1B;REV__nc|ENSG00000205560|Q92523-3|CPT1B;REV__nc|ENSG00000205560|Q92523-4|CPT1B	58.78195531508484	0.3343278462358323	6				NaN	NaN	0	NaN	1925	2482	4408
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4410	16.145	NaN	13049	30	0	2316.4	0.106	+			33490	RKEGRKERKK	10	88	657.907095567053	1313.799638200906	2	657.9088745117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RKEGRKERKK_	nc|ENSG00000135119|Q96EX2-2|RNFT2	79.71258880314673	0.19796908725841375	6				NaN	NaN	0	NaN	1926	2482	4408
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4411	16.148	NaN	6674.3	30	0	1521.2	0.106	+			30976	QEQTFQLLK	9	70	567.8114668652906	1133.6083807973812	2	567.8134155273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QEQTFQLLK_	ENSG00000164761|ENST00000297350|TNFRSF11B	90.36981228632155	0.0638227155548745	6				NaN	NaN	0	NaN	1927	2482	4408
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4412	16.149	NaN	16203	30	0	2552.4	0.106			+	11088	FEVTDETIQK	10	84	605.304095487187	1208.593638041174	2	605.3060913085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FEVTDETIQK_	REV__ENSG00000117528|ENST00000370214|ABCD3;REV__nc|ENSG00000117528|P28288-2|ABCD3	87.69643885390035	0.14426223466775756	6				NaN	NaN	0	NaN	1928	2482	4408
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4413	16.151	NaN	4599.7	30	0	1500.3	0.106	+			31011	QESQTTRSV	9	59	518.2550657828023	1034.4955786324044	2	518.25732421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QESQTTRSV_	ENSG00000145113|ENST00000463781|MUC4;MUC4|p.L3985Ffs*274|1|0.3|ENSG00000145113|chr3:195779627-195779627|G/-|frameshift_variant;MUC4|p.N4902Tfs*8|1|0.37|ENSG00000145113|chr3:195761027-195761027|T/-|frameshift_variant;nc|ENSG00000145113|Q99102-10|MUC4;nc|ENSG00000145113|Q99102-11|MUC4;nc|ENSG00000145113|Q99102-15|MUC4;nc|ENSG00000145113|Q99102-16|MUC4;nc|ENSG00000145113|Q99102-17|MUC4;nc|ENSG00000145113|Q99102-2|MUC4;nc|ENSG00000145113|Q99102-3|MUC4;nc|ENSG00000145113|Q99102-5|MUC4;nc|ENSG00000145113|Q99102-7|MUC4;nc|ENSG00000145113|Q99102-8|MUC4;nc|ENSG00000145113|Q99102-9|MUC4	101.25262130126117	0.03792372629710479	6				NaN	NaN	0	NaN	1929	2482	4408
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4414	16.153	NaN	7319.8	30	0	867.03	0.033				-1	 	0	71	435.77263084501715	869.5307087568343	2	435.7739562988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1930	2482	4408
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4415	16.154	NaN	6184.4	30	0	838.61	0.142				-1	 	0	45	367.5754036924924	1099.7043816776772	3	367.5765075683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1931	2482	4408
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4433	16.193	NaN	15280	30	0	4209.2	0.214				-1	DGMEGFVLEG	10	78	535.2291386000802	1068.4437242669603	2	535.23095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_DGM(Oxidation (M))EGFVLEG_	ENSG00000177731|ENST00000327031|FLII;ENST00000578101.5_1_17:18148454-18160363:-|nuORF;nc|ENSG00000177731|Q13045-2|FLII;nc|ENSG00000177731|Q13045-3|FLII	49.44154591367651	0.46214596422418036	6				NaN	NaN	0	NaN	1946	2485	4432
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4434	16.197	NaN	12794	30	0	6212.1	0.106			+	31456	QKTEEVLKK	9	73	551.8275707611555	1101.6405885891108	2	551.8296508789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QKTEEVLKK_	REV__ENSG00000197535|ENST00000399233|MYO5A;REV__MYO5A|p.I1440Nfs*19|1|0.44|ENSG00000197535|chr15:52336477-52336478|-/T|frameshift_variant;REV__MYO5A|p.M1056I|1|0.06|ENSG00000197535|chr15:52364695-52364695|C/A|missense_variant;REV__nc|ENSG00000197535|Q9Y4I1-2|MYO5A;REV__nc|ENSG00000197535|Q9Y4I1|MYO5A	44.116797842482775	0.37197099687881774	6				NaN	NaN	0	NaN	1947	2485	4432
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4435	16.199	NaN	10669	30	0	1822.7	0.106				-1	 	0	73	522.2943358894101	1042.5741188456202	2	522.2960205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1948	2485	4432
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4436	16.2	NaN	25433	30	0	6320.9	0.106			+	22571	KTSRRRGGA	9	96	494.7914285339819	987.5683041347638	2	494.79296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTSRRRGGA_	REV__ENST00000519591.5_1_8:144413480-144414663:-|nuORF	96.0336014099291	0.047854655524928534	6				NaN	NaN	0	NaN	1949	2485	4432
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4437	16.202	NaN	4996	30	0	549.06	0.106			+	-1	SWCWSLTLSCA	11	77	685.7989703684945	1369.5833878037888	2	685.8002319335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C)	_SWC(Carbamidomethyl (C))WSLTLSC(Carbamidomethyl (C))A_	REV__ENST00000477814.5_1_22:50686861-50687483:-|nuORF	47.657333605630114	0.4531673460382624	6				NaN	NaN	0	NaN	1950	2485	4432
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4438	16.204	NaN	23481	30	0	2045.7	0.034				-1	 	0	86	474.75167652435624	947.4888001155125	2	474.7521057128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1951	2485	4432
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4439	16.205	NaN	16026	30	0	3414.7	0.139			+	22862	KVKLDRSQ	8	74	487.29160713775826	972.5686613423165	2	487.29278564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KVKLDRSQ_	REV__ENST00000472789.1_1_7:150936247-150937287:-|nuORF	64.20726635412375	0.4601301477144759	6				NaN	NaN	0	NaN	1952	2485	4432
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4457	16.244	NaN	62659	30	0	11367	0.214				-1	 	0	86	501.3196880062131	1000.6248230792262	2	501.3211669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1967	2488	4456
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4458	16.248	NaN	13885	30	0	2242.9	0.106	+			28477	NGEHRNRGA	9	77	505.7471324407469	1009.4797119482938	2	505.7486572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NGEHRNRGA_	ENSG00000126870|ENST00000407559|DYNC2I1	68.78682469695295	0.14603441672067394	6				NaN	NaN	0	NaN	1968	2488	4456
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4459	16.25	NaN	3426.2	30	0	715.97	0.106			+	41673	SVSAPVGPEK	10	65	485.7626841734791	969.5108154137582	2	486.333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVSAPVGPEK_	REV__ENSG00000105357|ENST00000642316|MYH14;REV__MYH14|p.G549Wfs*8|1|0.23|ENSG00000105357|chr19:50250519-50250520|-/C|frameshift_variant;REV__MYH14|p.L1950Sfs*14|1|0.34|ENSG00000105357|chr19:50309646-50309646|C/-|frameshift_variant;REV__MYH14|p.M997*|1|0.19|ENSG00000105357|chr19:50271483-50271483|A/-|frameshift_variant;REV__MYH14|p.P548Lfs*25|2|0.32|ENSG00000105357|chr19:50250520-50250520|C/-|frameshift_variant;REV__MYH14|p.R929Gfs*44|1|0.38|ENSG00000105357|chr19:50268237-50268237|G/-|frameshift_variant;REV__nc|ENSG00000105357|Q7Z406-6|MYH14	41.42661286455405	0.5359995577334734	6				NaN	NaN	0	NaN	1969	2488	4456
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4460	16.252	NaN	10185	30	0	1274.1	0.106				-1	 	0	64	442.7804280325995	883.546303131999	2	442.78167724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1970	2488	4456
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4461	16.253	NaN	16587	30	0	6915.1	0.106	+			20332	KEREQFGKP	9	80	559.8011291250331	1117.587705316866	2	559.80322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEREQFGKP_	tr|U7T685|U7T685_FUSNUButyryl-CoAdehydrogenaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00148PE=3SV=1	79.71258880314673	0.09879134589249085	6				NaN	NaN	0	NaN	1971	2488	4456
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4462	16.255	NaN	16581	30	0	3907.4	0.035	+			47012	VKVSALGLSK	10	77	334.5500263035819	NaN	0	334.5500183105469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VKVSALGLSK_	ENSG00000112655|ENST00000230419|PTK7;ENST00000487673.5_1_6:43111066-43128616:+|nuORF;nc|ENSG00000112655|Q13308-2|PTK7;nc|ENSG00000112655|Q13308-3|PTK7;nc|ENSG00000112655|Q13308-4|PTK7;nc|ENSG00000112655|Q13308-6|PTK7	51.19269402634007	0.2980620950593832	6				NaN	NaN	0	NaN	1972	2488	4456
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4463	16.256	NaN	7222	30	0	728.02	0.139				-1	 	0	74	466.2442293074187	930.4739056816375	2	466.24560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1973	2488	4456
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4481	16.293	NaN	42598	30	0	27948	0.192	+			26733	LVLMVIVLQ	9	73	348.55603716684334	1042.64628210073	3	348.55706787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LVLM(Oxidation (M))VIVLQ_	ENST00000422647.5_1_7:99156430-99158253:+|nuORF	49.44154591367651	0.3095138337212152	6				NaN	NaN	0	NaN	1988	2491	4480
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4482	16.297	NaN	21877	30	0	9548.5	0.106				-1	LYDEMVAAQI	10	80	584.7812925832629	1167.5480322333258	2	584.7830810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LYDEM(Oxidation (M))VAAQI_	ENSG00000257335|ENST00000475668|MGAM;ENSG00000257335|ENST00000475668|MGAM;nc|ENSG00000257335|O43451-1|MGAM	58.78195531508484	0.37691818691852547	6				NaN	NaN	0	NaN	1989	2491	4480
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4483	16.299	NaN	40191	30	0	8628.4	0.106				-1	 	0	106	473.2759043503377	944.5372557674755	2	473.27703857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	1990	2491	4480
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4484	16.301	NaN	29706	30	0	7462.1	0.106	+			39636	STIDPSSVMVL	11	83	574.7972197525112	1147.5798865718223	2	574.7991333007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STIDPSSVMVL_	ENSG00000206072|ENST00000544088|SERPINB11;SERPINB11|p.R288Pfs*5|1|0.4|ENSG00000206072|chr18:63723077-63723078|-/C|frameshift_variant	79.48907831485694	0.15663227531959176	6				NaN	NaN	0	NaN	1991	2491	4480
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4485	16.302	NaN	7677.2	30	0	3467.5	0.106				-1	TASCEVFEIL	10	49	390.18980102520686	1167.5475736758206	3	390.19110107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_TASC(Carbamidomethyl (C))EVFEIL_	DNAH10|p.D3416Mfs*54|1|0.28|ENSG00000197653|chr12:123914871-123914871|C/-|frameshift_variant;DNAH10|p.N3499Ifs*2|1|0.14|ENSG00000197653|chr12:123916578-123916578|A/-|frameshift_variant;DNAH10|p.Q2965Kfs*11|1|0.57|ENSG00000197653|chr12:123894687-123894687|C/-|frameshift_variant;ENSG00000197653|ENST00000673944|DNAH10;nc|ENSG00000197653|Q8IVF4|DNAH10	22.579656572578934	0.6954366826851017	6				NaN	NaN	0	NaN	1992	2491	4480
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4486	16.304	NaN	6740.9	30	0	900.55	0.106			+	12123	GAGDMRCDR	9	59	490.70541332662805	979.3962737200561	2	490.7066345214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GAGDMRCDR_	REV__ENST00000377991.8_1_9:35853833-35854379:+|nuORF	38.80614096846853	0.43426287593479557	6				NaN	NaN	0	NaN	1993	2491	4480
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4487	16.306	NaN	18707	30	0	6773.3	0.037			+	36314	SESLDMLALLG	11	58	383.5337220441771	1147.5793367327315	3	383.53485107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SESLDMLALLG_	REV__ENSG00000144214|ENST00000308528|LYG1	32.75053402867276	0.6462648045997152	6				NaN	NaN	0	NaN	1994	2491	4480
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4505	16.343	NaN	127510	30	0	20542	0.155			+	-1	SIDKMMRGK	9	95	549.2752102527252	1096.5358675722503	2	549.277099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_SIDKM(Oxidation (M))M(Oxidation (M))RGK_	REV__ENSG00000197106|ENST00000331565|SLC6A17	71.29570347882199	0.13518600952103718	6				NaN	NaN	0	NaN	2009	2494	4504
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4506	16.346	NaN	15320	30	0	1187.5	0.106			+	50137	WIQKTKMV	8	76	517.2964544882968	1032.5783560433936	2	517.2981567382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WIQKTKMV_	REV__ENSG00000145860|ENST00000424310|RNF145;REV__nc|ENSG00000145860|Q96MT1-2|RNF145;REV__nc|ENSG00000145860|Q96MT1-3|RNF145;REV__nc|ENSG00000145860|Q96MT1-4|RNF145;REV__nc|ENSG00000145860|Q96MT1-5|RNF145;REV__RNF145|p.T570Sfs*23|1|0.07|ENSG00000145860|chr5:159158953-159158954|-/AGCATAC|frameshift_variant	71.29570347882199	0.39610197767395533	6				NaN	NaN	0	NaN	2010	2494	4504
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4507	16.348	NaN	25341	30	0	7825.7	0.106			+	-1	SIDKMMRGK	9	72	366.51944463813	1096.53650451459	3	366.5205993652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Oxidation (M)	_SIDKM(Oxidation (M))M(Oxidation (M))RGK_	REV__ENSG00000197106|ENST00000331565|SLC6A17	37.81151784470057	0.4459294069877048	6				NaN	NaN	0	NaN	2011	2494	4504
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4508	16.35	NaN	21455	30	0	3490.1	0.106			+	50179	WLIMSSYSGI	10	89	586.7867336519448	1171.5589143706895	2	586.7886962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_WLIM(Oxidation (M))SSYSGI_	REV__PTPRB|p.P401Lfs*55|1|0.07|ENSG00000127329|chr12:70590158-70590158|G/-|frameshift_variant	90.77665401227738	0.12662738171778068	6				NaN	NaN	0	NaN	2012	2494	4504
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4509	16.351	NaN	20866	30	0	2989	0.106	+			9070	EGGRCVDGRC	10	75	526.2239839101488	1050.4334148870976	2	526.2257690429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EGGRCVDGRC_	ENSG00000168477|ENST00000644971|TNXB;nc|ENSG00000168477|P22105-1|TNXB;nc|ENSG00000168477|P22105-4|TNXB;TNXB|p.E2100Sfs*2|1|0.21|ENSG00000168477|chr6:32067907-32067907|C/-|frameshift_variant;TNXB|p.E2633Sfs*2|1|0.06|ENSG00000168477|chr6:32056832-32056832|C/-|frameshift_variant;TNXB|p.G2152Afs*46|1|0.18|ENSG00000168477|chr6:32067750-32067750|C/-|frameshift_variant	52.936696900407355	0.4300801048568001	6				NaN	NaN	0	NaN	2013	2494	4504
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4510	16.353	NaN	13077	30	0	4653.2	0.106			+	-1	EAMEHAHLAP	10	66	561.2551775329978	1120.4958021327955	2	561.2571411132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_EAM(Oxidation (M))EHAHLAP_	REV__ENST00000403687.7_1_2:33701482-33701566:+|nuORF	35.61828744233558	0.588957954432594	6				NaN	NaN	0	NaN	2014	2494	4504
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4511	16.355	NaN	4027	30	0	561.08	0.036			+	21899	KRRQIAKR	8	65	528.3489363489184	1054.6833197646367	2	528.3507080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KRRQIAKR_	REV__ENSG00000174527|ENST00000310903|MYO1H;REV__nc|ENSG00000174527|Q8N1T3-3|MYO1H;REV__nc|ENSG00000174527|Q8N1T3|MYO1H	68.484700416344	0.4195245774506064	6				NaN	NaN	0	NaN	2015	2494	4504
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4512	16.356	NaN	8201.7	30	0	1779.1	0.14			+	12343	GDKQWSIQP	9	68	529.7653198242188	NaN	0	529.7653198242188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_GDKQWSIQP_	REV__ENSG00000198799|ENST00000361127|LRIG2	54.722347961057174	0.17414871455573902	6				NaN	NaN	0	NaN	2016	2494	4504
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4530	16.394	NaN	16724	30	0	1722.4	0.214	+			42972	TEKEGKDQEL	10	85	588.7887126967557	1175.5628724603114	2	588.7908935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEKEGKDQEL_	ENSG00000137497|ENST00000393695|NUMA1;nc|ENSG00000137497|Q14980-2|NUMA1;nc|ENSG00000137497|Q14980-3|NUMA1;nc|ENSG00000137497|Q14980-4|NUMA1;NUMA1|p.A1067S|1|0.25|ENSG00000137497|chr11:72014304-72014304|C/A|missense_variant;NUMA1|p.K1766Rfs*2|1|0.39|ENSG00000137497|chr11:72007357-72007357|G/-|frameshift_variant;NUMA1|p.L1786Pfs*18|1|0.23|ENSG00000137497|chr11:72007295-72007296|-/G|frameshift_variant	191.44940797552337	8.906924887938949E-05	6				NaN	NaN	0	NaN	2031	2497	4529
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4531	16.398	NaN	15471	30	0	1533.1	0.106			+	19815	KEDFGFIKK	9	86	556.3130974164219	1110.6116418996437	2	556.3148803710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEDFGFIKK_	REV__tr|U7SQS1|U7SQS1_FUSNUDiaminopropionateammonia-lyaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01557PE=4SV=1	109.47833844074708	0.029530294723441826	6				NaN	NaN	0	NaN	2032	2497	4529
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4532	16.4	NaN	8051.5	30	0	1451.8	0.106	+			13287	GIYEMIPKE	9	71	540.2761625792303	1078.5377722252606	2	540.2780151367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GIYEMIPKE_	ENSG00000122121|ENST00000371106|XPNPEP2	42.396135135203025	0.392153681582562	6				NaN	NaN	0	NaN	2033	2497	4529
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4533	16.402	NaN	5390.2	30	0	573.17	0.106	+			4019	ATCSRVLNK	9	61	524.7801313487796	1047.5457097643591	2	524.7822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_ATC(Carbamidomethyl (C))SRVLNK_	ENSG00000176853|ENST00000334705|FAM91A1	54.722347961057174	0.257609425301511	6				NaN	NaN	0	NaN	2034	2497	4529
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4534	16.403	NaN	6502.5	30	0	1299.5	0.106			+	-1	RPKGPHHCLTP	11	66	650.3414932731516	1298.6684336131032	2	650.3436889648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_RPKGPHHC(Carbamidomethyl (C))LTP_	REV__ENST00000319380.11_2_17:74396357-74396605:-|nuORF	47.657333605630114	0.4531673460382624	6				NaN	NaN	0	NaN	2035	2497	4529
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4535	16.405	NaN	3172	30	0	406.43	0.039			+	33796	RQHRTPHRGLA	11	70	664.8735761523357	1327.7325993714712	2	664.875244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RQHRTPHRGLA_	REV__NKX6-1|p.A6Gfs*159|1|0.5|ENSG00000163623|chr4:84498212-84498213|-/C|frameshift_variant	24.519189625965996	0.7326048944360514	6				NaN	NaN	0	NaN	2036	2497	4529
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4536	16.406	NaN	7178.2	30	0	1709	0.142	+			21197	KLDKNKLK	8	70	493.81981706411517	985.6250811950304	2	493.8211975097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KLDKNKLK_	tr|U7SYG6|U7SYG6_FUSNUGyrI-likesmallmoleculebindingdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00854PE=4SV=1	60.11826168202944	0.5006107059937851	6				NaN	NaN	0	NaN	2037	2497	4529
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4554	16.444	NaN	74289	30	0	20296	0.17				-1	 	0	75	479.3067658952885	956.598978857377	2	479.30780029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2052	2500	4553
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4555	16.447	NaN	57679	30	0	19535	0.106				-1	 	0	85	396.2298082147928	1185.6675952445785	3	396.2310791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2053	2500	4553
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4556	16.449	NaN	63899	30	0	14461	0.106	+			43993	TPGTCATKSCC	11	98	564.7253780727209	1127.4362032122417	2	564.7279663085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_TPGTCATKSC(Carbamidomethyl (C))C_	CNTFR|p.N60Tfs*86|1|0.05|ENSG00000122756|chr9:34564739-34564740|-/TCCTG|frameshift_variant	54.776311868738084	0.3700837260462177	6				NaN	NaN	0	NaN	2054	2500	4553
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4557	16.451	NaN	94520	30	0	25824	0.106				-1	 	0	110	421.2419907785366	1260.7041429358098	3	421.24298095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2055	2500	4553
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4558	16.453	NaN	47272	30	0	12622	0.106	+			6376	AVTYTEHAK	9	91	510.2596667409474	1018.5047805486948	2	510.2613830566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVTYTEHAK_	ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2	112.41091882917199	0.026537921851008135	6				NaN	NaN	0	NaN	2056	2500	4553
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4559	16.455	NaN	31313	30	0	5242.7	0.106			+	22421	KTKNKLSSDQL	11	84	631.3591541456954	1260.7037553581906	2	631.3611450195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KTKNKLSSDQL_	REV__ENST00000323571.8_1_17:38438263-38438389:+|nuORF	100.81924332030881	0.058993442163212936	6				NaN	NaN	0	NaN	2057	2500	4553
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4560	16.456	NaN	60104	30	0	17379	0.037			+	-1	QANGACVMDGF	11	97	376.8192651862329	1127.4359661588987	3	376.8206787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_QANGACVM(Oxidation (M))DGF_	REV__ENSG00000007038|ENST00000005995|PRSS21;REV__ENST00000570594.5_1_16:2868940-2871170:+|nuORF;REV__ENST00000577043.1_1_16:2867692-2871170:+|nuORF;REV__nc|ENSG00000007038|Q9Y6M0-2|PRSS21	34.08650109265054	0.6322515996262609	6				NaN	NaN	0	NaN	2058	2500	4553
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4577	16.493	NaN	40844	30	0	4004	0.214	+			1530	AGATKMVPTW	10	108	531.2763592480037	1060.5381655628073	2	531.2782592773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AGATKMVPTW_	ENST00000245543.5_1_17:73125996-73126314:+|nuORF	104.74654710444128	0.06360088227210728	6				NaN	NaN	0	NaN	2072	2503	4576
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4578	16.497	NaN	14124	30	0	2059.2	0.106				-1	VLLSLLACSV	10	63	358.8792857895779	1073.6160279689338	3	358.88031005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_VLLSLLAC(Carbamidomethyl (C))SV_	ENSG00000173175|ENST00000462833|ADCY5;nc|ENSG00000173175|O95622-2|ADCY5	36.446750945000026	0.5818864909973037	6				NaN	NaN	0	NaN	2073	2503	4576
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4579	16.499	NaN	15747	30	0	1815.1	0.106	+			36136	SEKRKQISV	9	80	537.8171665035464	NaN	0	537.8171997070312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEKRKQISV_	ENSG00000100994|ENST00000216962|PYGB;PYGB-C20orf152|1|fusion;PYGB-C20orf152|2|fusion;PYGB|p.T677Kfs*4|1|0.44|ENSG00000100994|chr20:25292466-25292466|C/-|frameshift_variant	112.10723106719422	0.007794126129732805	6				NaN	NaN	0	NaN	2074	2503	4576
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4580	16.501	NaN	14393	30	0	2762	0.106	+			50259	WQDPHSWNS	9	82	578.7452708629902	1155.4759887927803	2	578.7470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_WQDPHSWNS_	ENSG00000160712|ENST00000368485|IL6R;ENST00000507256.1_1_1:154407503-154427053:+|nuORF;nc|ENSG00000160712|P08887-2|IL6R	76.7741389293348	0.11149722112137898	6				NaN	NaN	0	NaN	2075	2503	4576
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4581	16.502	NaN	15431	30	0	2668.3	0.106				-1	 	0	78	541.3326887951941	1080.6508246571882	2	541.3345947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2076	2503	4576
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4582	16.504	NaN	14832	30	0	1548.8	0.037	+			21819	KREKKKHQ	8	98	361.2241708842366	1080.6506832529099	3	361.2252502441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KREKKKHQ_	ENST00000496972.6_1_2:25600096-25600174:-|nuORF	40.77816245573522	0.6514838689002179	6				NaN	NaN	0	NaN	2077	2503	4576
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4600	16.543	NaN	67967	30	0	16982	0.176				-1	 	0	94	565.3361678879523	1128.6577828427046	2	565.3380737304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2092	2506	4599
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4601	16.545	NaN	26616	30	0	2845	0.106	+			33165	RETRSRKPG	9	89	543.8095104558532	1085.6044679785064	2	543.8113403320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RETRSRKPG_	ENSG00000184735|ENST00000327968|DDX53	73.97473282117947	0.12360187025703594	6				NaN	NaN	0	NaN	2093	2506	4599
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4602	16.548	NaN	63739	30	0	45224	0.106	+			45862	VALRNRCP	8	68	464.7621013686727	927.5096498041454	2	464.7638854980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VALRNRCP_	nc|ENSG00000167280|Q8NFI3-3|ENGASE	44.53106598305862	0.628196326904373	6				NaN	NaN	0	NaN	2094	2506	4599
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4603	16.549	NaN	37350	30	0	3693.6	0.106			+	6837	CIILGDEALI	10	92	530.2919795704298	1058.5694062076595	2	530.2935791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_CIILGDEALI_	REV__tr|U7SNS1|U7SNS1_FUSNURsmDfamilyRNAmethyltransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01737PE=4SV=1	71.29570347882199	0.26673431503403816	6				NaN	NaN	0	NaN	2095	2506	4599
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4604	16.551	NaN	41794	30	0	8974.2	0.106	+			36245	SEMPSLVLLA	10	101	353.86351841576845	1058.5687258475054	3	353.86456298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SEMPSLVLLA_	tr|U7T466|U7T466_FUSNURestrictionendonucleaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00272PE=4SV=1	42.396135135203025	0.5270658956260207	6				NaN	NaN	0	NaN	2096	2506	4599
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4605	16.553	NaN	7111.3	30	0	1119.9	0.106	+			48294	VTEALWTY	8	69	491.74552802352923	981.4765031138585	2	491.7469482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTEALWTY_	ENST00000601658.5_1_2:149634897-149646240:-|nuORF	52.29916861842294	0.578018602984656	6				NaN	NaN	0	NaN	2097	2506	4599
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4606	16.555	NaN	14263	30	0	2389.5	0.034				-1	 	0	70	486.25996504352827	970.5053771538566	2	486.26116943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2098	2506	4599
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4624	16.593	NaN	17168	30	0	3042.7	0.214	+			342	AAQAHTREL	9	84	498.7645720327881	NaN	0	498.7645263671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAQAHTREL_	ENSG00000103549|ENST00000324685|RNF40;ENST00000493683.5_1_16:30773821-30780773:+|nuORF;nc|ENSG00000103549|O75150-3|RNF40;nc|ENSG00000103549|O75150-4|RNF40	82.7504851949679	0.061958946529908215	6				NaN	NaN	0	NaN	2113	2509	4623
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4625	16.597	NaN	21901	30	0	4755.2	0.106				-1	 	0	80	501.3195691974142	1000.6245854616284	2	501.32122802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2114	2509	4623
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4626	16.599	NaN	8774.8	30	0	1104.8	0.106			+	19935	KEFHANLIE	9	74	550.7911174117035	NaN	0	550.3638916015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEFHANLIE_	REV__ENSG00000106536|ENST00000518318|POU6F2;REV__nc|ENSG00000106536|P78424-2|POU6F2;REV__nc|ENSG00000106536|P78424|POU6F2	70.8162118820467	0.10318768208603292	6				NaN	NaN	0	NaN	2115	2509	4623
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4627	16.601	NaN	5868.8	30	0	531.03	0.106				-1	SVGLWPLCL	9	69	348.85654654734395	1043.547810242232	3	348.85760498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_SVGLWPLC(Carbamidomethyl (C))L_	ENST00000396655.6_1_12:4763520-4764011:+|nuORF	42.396135135203025	0.392153681582562	6				NaN	NaN	0	NaN	2116	2509	4623
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4628	16.602	NaN	3331	30	0	602.33	0.106				-1	VCMLTCRAKG	10	76	577.7793764966369	1153.5442000600738	2	577.781494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C),Oxidation (M)	_VC(Carbamidomethyl (C))M(Oxidation (M))LTCRAKG_	ADAMTS5|p.K666M|1|0.1|ENSG00000154736|chr21:26932056-26932056|T/A|missense_variant	32.81241826257853	0.6118718159329168	6				NaN	NaN	0	NaN	2117	2509	4623
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4629	16.604	NaN	10398	30	0	1966.4	0.035			+	44171	TQSNRVLY	8	76	490.7598869167182	979.5052209002364	2	490.76123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TQSNRVLY_	REV__ENSG00000107338|ENST00000377707|SHB	71.29570347882199	0.39610197767395533	6				NaN	NaN	0	NaN	2118	2509	4623
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4630	16.605	NaN	4581.5	30	0	355.27	0.14			+	21999	KSFIFGKMS	9	65	522.7813273063473	1043.5481016794945	2	522.7833862304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KSFIFGKMS_	REV__ENST00000517845.5_2_8:126094662-126094701:-|nuORF	42.86426827375447	0.38666266728046506	6				NaN	NaN	0	NaN	2119	2509	4623
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4648	16.645	NaN	1206900	30	0	133050	0.127	+			38882	SSNSYAIKK	9	121	499.267789329997	996.521025726794	2	499.26995849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSNSYAIKK_	ENSG00000083845|ENST00000196551|RPS5;ENST00000599232.1_1_19:58906030-58906114:+|nuORF	188.9123650225555	0.0004013498785194686	6				NaN	NaN	0	NaN	2134	2512	4647
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4649	16.647	NaN	45470	30	0	10114	0.106	+			36669	SGMGSTVSK	9	83	427.2064051946498	852.3982574560996	2	427.20758056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SGMGSTVSK_	ENSG00000132383|ENST00000254719|RPA1;RPA1|p.N274Mfs*5|1|0.18|ENSG00000132383|chr17:1879272-1879272|A/-|frameshift_variant	109.43880257439609	0.029570636687953285	6				NaN	NaN	0	NaN	2135	2512	4647
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4650	16.649	NaN	18363	30	0	1790.7	0.106	+			39113	SSTDINVKK	9	78	496.27453807653967	NaN	0	496.27459716796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSTDINVKK_	ENSG00000164749|ENST00000396423|HNF4G;nc|ENSG00000164749|Q14541-2|HNF4G;nc|ENSG00000164749|Q14541|HNF4G	117.81106730687013	0.0026430897281881707	6				NaN	NaN	0	NaN	2136	2512	4647
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4651	16.651	NaN	102860	30	0	16393	0.106	+			40229	STSENITQK	9	103	504.25225511949	1006.48995730578	2	504.2431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STSENITQK_	DDX3Y|p.V655Gfs*2|1|0.09|ENSG00000067048|chrY:12918097-12918098|-/G|frameshift_variant;ENSG00000067048|ENST00000336079|DDX3Y;ENSG00000215301|ENST00000644876|DDX3X;nc|ENSG00000067048|O15523-2|DDX3Y;nc|ENSG00000215301|O00571-2|DDX3X	190.62248201133156	0.00022967542297918066	6				NaN	NaN	0	NaN	2137	2512	4647
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4652	16.652	NaN	14358	30	0	2719.3	0.106				-1	 	0	82	530.2919795704298	1058.5694062076595	2	530.3243408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2138	2512	4647
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4653	16.654	NaN	55667	30	0	9944.7	0.106	+			31547	QLLQFAAK	8	87	459.77424873225897	917.533944531318	2	459.77532958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QLLQFAAK_	ENSG00000078687|ENST00000696270|TNRC6C;nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C	63.30626980617807	0.4690498839812213	6				NaN	NaN	0	NaN	2139	2512	4647
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4654	16.656	NaN	33012	30	0	11029	0.035	+			17495	IDEEMLQK	8	70	511.24689963617004	1020.4792463391401	2	511.2483215332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_IDEEM(Oxidation (M))LQK_	ENSG00000113643|ENST00000231572|RARS1;nc|ENSG00000113643|P54136-2|RARS1	55.50420428727701	0.5462892107279674	6				NaN	NaN	0	NaN	2140	2512	4647
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4672	16.69	NaN	829020	30	0	169790	0.093	+			40230	STSENITQK	9	84	504.25225511949	1006.48995730578	2	504.2532043457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STSENITQK_	DDX3Y|p.V655Gfs*2|1|0.09|ENSG00000067048|chrY:12918097-12918098|-/G|frameshift_variant;ENSG00000067048|ENST00000336079|DDX3Y;ENSG00000215301|ENST00000644876|DDX3X;nc|ENSG00000067048|O15523-2|DDX3Y;nc|ENSG00000215301|O00571-2|DDX3X	190.62248201133156	0.00022967542297918066	6				NaN	NaN	0	NaN	2155	2515	4671
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4673	16.692	NaN	80224	30	0	14307	0.106			+	44380	TSLGMHFR	8	87	482.7369312197754	963.4593095063508	2	482.7380065917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_TSLGM(Oxidation (M))HFR_	REV__DNAH14|p.I2559Nfs*2|1|0.39|ENSG00000185842|chr1:225337448-225337449|-/A|frameshift_variant;REV__ENSG00000185842|ENST00000682510|DNAH14;REV__nc|ENSG00000185842|Q0VDD8-4|DNAH14;REV__nc|ENSG00000185842|Q0VDD8|DNAH14	114.5858319719848	0.24229603992967627	6				NaN	NaN	0	NaN	2156	2515	4671
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4674	16.694	NaN	33356	30	0	7074.3	0.106			+	31888	QQEFHSQQ	8	67	516.2314601154937	1030.4483672977874	2	516.23291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QQEFHSQQ_	REV__ENSG00000186472|ENST00000333891|PCLO;REV__nc|ENSG00000186472|Q9Y6V0-6|PCLO;REV__PCLO|p.K4306Gfs*8|1|0.04|ENSG00000186472|chr7:82915067-82915070|TTTT/-|frameshift_variant;REV__PCLO|p.N4248Kfs*31|1|0.28|ENSG00000186472|chr7:82915242-82915243|-/T|frameshift_variant;REV__PCLO|p.T3933Nfs*47|1|0.06|ENSG00000186472|chr7:82916188-82916189|-/T|frameshift_variant;REV__PCLO|p.T5069Qfs*20|1|0.11|ENSG00000186472|chr7:82760722-82760722|T/-|frameshift_variant	40.77816245573522	0.6514838689002179	6				NaN	NaN	0	NaN	2157	2515	4671
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4675	16.696	NaN	26813	30	0	8333.5	0.106				-1	GDFTLAILM	9	63	332.84085098327637	995.5007235500291	3	332.8418884277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_GDFTLAILM(Oxidation (M))_	ENSG00000253598|ENST00000518568|SLC10A5;SLC10A5|p.A299Qfs*4|1|0.24|ENSG00000253598|chr8:81694079-81694079|T/-|frameshift_variant	26.69291269510374	0.5537881896960711	6				NaN	NaN	0	NaN	2158	2515	4671
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4676	16.698	NaN	14360	30	0	1994	0.106	+			20166	KEKRSHRR	8	84	548.8256396390664	1095.6367263449326	2	548.827880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEKRSHRR_	ENSG00000070882|ENST00000313367|OSBPL3;nc|ENSG00000070882|Q9H4L5-3|OSBPL3;nc|ENSG00000070882|Q9H4L5-5|OSBPL3;nc|ENSG00000070882|Q9H4L5-7|OSBPL3;OSBPL3|p.S626Qfs*26|1|0.12|ENSG00000070882|chr7:24830776-24830776|A/-|frameshift_variant	72.87924865735499	0.38290713436690915	6				NaN	NaN	0	NaN	2159	2515	4671
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4677	16.699	NaN	335160	30	0	35832	0.106			+	33706	RPEQLAAGV	9	130	470.7647556158343	NaN	0	470.7637634277344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RPEQLAAGV_	REV__ENSG00000187714|ENST00000374115|SLC18A3;REV__SLC18A3|p.A20D|1|0.42|ENSG00000187714|chr10:49610799-49610799|C/A|missense_variant	93.19546047674547	0.03515475374905802	6				NaN	NaN	0	NaN	2160	2515	4671
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4678	16.701	NaN	9338.2	30	0	1452.3	0.106	+			16511	HEVDPVRRA	9	71	539.7916941652853	NaN	0	539.791748046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HEVDPVRRA_	ENSG00000118971|ENST00000261254|CCND2;nc|ENSG00000118971|P30279-2|CCND2	84.9155231211612	0.05454024040755679	6				NaN	NaN	0	NaN	2161	2515	4671
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4679	16.703	NaN	4640.8	30	0	813.76	0.032	+			29762	PHVSGLSQ	8	64	412.7166699442241	NaN	0	412.7167053222656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_PHVSGLSQ_	ENSG00000257008|ENST00000582579|GPR142;GPR142|p.C153Vfs*24|1|0.29|ENSG00000257008|chr17:74370618-74370618|G/-|frameshift_variant;nc|ENSG00000257008|Q7Z601|GPR142	47.91560031466742	1.7418937515398478	6				NaN	NaN	0	NaN	2162	2515	4671
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4697	16.739	NaN	158680	30	0	26115	0.142	+			12836	GENRERMC	8	75	526.224195859777	1050.4338387863538	2	526.2261352539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GENRERMC(Carbamidomethyl (C))_	nc|ENSG00000069188|Q58EX2-4|SDK2	52.29916861842294	0.578018602984656	6				NaN	NaN	0	NaN	2177	2518	4696
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4698	16.742	NaN	25382	30	0	2434.5	0.106				-1	 	0	85	444.7655536838418	887.5165544344836	2	444.76678466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2178	2518	4696
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4699	16.744	NaN	19916	30	0	9494.3	0.106			+	30147	PSATRSGAKK	10	68	334.8615377223896	1001.5627837673687	3	334.86260986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PSATRSGAKK_	REV__ENSG00000215113|ENST00000542739|CXorf49B;REV__ENSG00000215115|ENST00000535490|CXorf49	37.59989570853033	0.5712608395912122	6				NaN	NaN	0	NaN	2179	2518	4696
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4700	16.746	NaN	36099	30	0	4618.1	0.106	+			35441	SASDVMSHK	9	96	481.2228672291936	960.4311815251872	2	481.22412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SASDVMSHK_	ENSG00000156675|ENST00000330843|RAB11FIP1;nc|ENSG00000156675|Q6WKZ4-2|RAB11FIP1;nc|ENSG00000156675|Q6WKZ4-3|RAB11FIP1;RAB11FIP1|p.E639Rfs*27|1|0.12|ENSG00000156675|chr8:37872887-37872888|-/T|frameshift_variant;RAB11FIP1|p.Q714Tfs*22|1|0.3|ENSG00000156675|chr8:37872662-37872663|-/T|frameshift_variant	126.24258497203832	0.01742065577488747	6				NaN	NaN	0	NaN	2180	2518	4696
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4701	16.748	NaN	45252	30	0	5352.3	0.106				-1	 	0	95	435.24449320184397	868.474433470488	2	435.2458190917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2181	2518	4696
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4702	16.749	NaN	32570	30	0	15823	0.106				-1	VKKEEKKMY	9	78	599.8292427674971	1197.6439326017942	2	599.8311157226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_VKKEEKKM(Oxidation (M))Y_	ENST00000605123.1_1_5:154871420-154871489:+|nuORF	76.84663266511073	0.11118375776443899	6				NaN	NaN	0	NaN	2182	2518	4696
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4703	16.751	NaN	15874	30	0	2476.9	0.032				-1	 	0	70	391.7283570273118	781.4421611214236	2	391.729736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2183	2518	4696
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4704	16.752	NaN	4046.3	30	0	1095.2	0.142			+	37215	SKKTSTTKRS	10	72	583.3312233575705	1164.6478937819409	2	583.3331298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SKKTSTTKRS_	REV__ENST00000530153.5_1_11:65378293-65378380:-|nuORF	53.01288593483079	0.42938717480846483	6				NaN	NaN	0	NaN	2184	2518	4696
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4722	16.79	NaN	198250	30	0	53337	0.064	+			9457	EKMQRVQVL	9	52	377.5506035406322	1129.6299812220966	3	377.5521240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EKMQRVQVL_	ENST00000518792.5_1_8:17509137-17509233:-|nuORF	69.6276240434122	0.14239879520340665	6				NaN	NaN	0	NaN	2199	2521	4721
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4723	16.791	NaN	299560	30	0	83304	0.106				-1	 	0	80	565.822372040103	1129.630191147006	2	565.8243408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2200	2521	4721
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4724	16.793	NaN	11935	30	0	1645.3	0.106			+	-1	KMKDATKKFA	10	83	592.328896067773	1182.643239202346	2	592.330810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_KM(Oxidation (M))KDATKKFA_	REV__ENST00000265077.7_1_5:82876407-82876467:+|nuORF	74.25504064058377	0.24255678544297835	6				NaN	NaN	0	NaN	2201	2521	4721
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4725	16.795	NaN	14154	30	0	1817.7	0.106			+	24630	LGSMLAIVIA	10	82	494.2994025740951	986.5842522149902	2	494.3006591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LGSMLAIVIA_	REV__ENSG00000187010|ENST00000328664|RHD	55.50420428727701	0.4067289358710215	6				NaN	NaN	0	NaN	2202	2521	4721
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4726	16.797	NaN	5213.3	30	0	480.95	0.106				-1	 	0	66	442.7735368451973	883.5325207571947	2	442.7745666503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2203	2521	4721
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4727	16.799	NaN	9422.3	30	0	1033.8	0.106			+	-1	LSGHMPIWCQ	10	77	614.7830955630477	1227.5516381928953	2	614.7849731445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_LSGHMPIWC(Carbamidomethyl (C))Q_	REV__TBC1D8|p.G38Afs*40|1|0.44|ENSG00000204634|chr2:101151141-101151141|C/-|frameshift_variant	35.61828744233558	0.588957954432594	6				NaN	NaN	0	NaN	2204	2521	4721
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4728	16.801	NaN	20022	30	0	5544.7	0.106			+	23783	LCLLNKLNGI	10	79	367.5547383830943	1099.6423857494829	3	367.55596923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LCLLNKLNGI_	REV__ENSG00000137269|ENST00000370888|LRRC1;REV__ENST00000487251.5_1_6:53762124-53769284:+|nuORF	33.921630207806714	0.6028135429846169	6				NaN	NaN	0	NaN	2205	2521	4721
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4729	16.802	NaN	3609.7	30	0	354.81	0.036	+			5604	AVCEKTFKH	9	68	560.2827360821376	1118.550919231075	2	560.28466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Carbamidomethyl (C)	_AVC(Carbamidomethyl (C))EKTFKH_	ENSG00000166188|ENST00000299237|ZNF319	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	2206	2521	4721
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4746	16.838	NaN	312180	30	0	49080	0.214				-1	 	0	112	379.2313492579315	1134.6722183739946	3	379.2325134277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2220	2524	4745
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4747	16.842	NaN	15840	30	0	1239.3	0.106	+			21757	KQQDVRFH	8	88	529.2804097898951	1056.54626664659	2	529.2824096679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KQQDVRFH_	CDCA7L|p.C406Vfs*46|1|0.5|ENSG00000164649|chr7:21903097-21903097|G/-|frameshift_variant;CDCA7L|p.L231Yfs*24|1|0.06|ENSG00000164649|chr7:21906629-21906630|-/CTGATAT|frameshift_variant;CDCA7L|p.T178Qfs*12|1|0.34|ENSG00000164649|chr7:21908279-21908279|T/-|frameshift_variant;ENSG00000164649|ENST00000406877|CDCA7L;nc|ENSG00000164649|Q96GN5-4|CDCA7L	55.50420428727701	0.5462892107279674	6				NaN	NaN	0	NaN	2221	2524	4745
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4748	16.844	NaN	37927	30	0	7350.7	0.106			+	25789	LSARGRRG	8	89	436.76228115427386	871.5100093753477	2	436.76348876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSARGRRG_	REV__ENST00000564281.5_1_16:89680092-89704100:+|nuORF	50.0245360154114	0.5941082100236891	6				NaN	NaN	0	NaN	2222	2524	4745
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4749	16.846	NaN	9780.9	30	0	1724.7	0.106				-1	 	0	76	450.777943240643	899.5413335480861	2	450.7790222167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2223	2524	4745
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4750	16.848	NaN	116780	30	0	34326	0.106				-1	 	0	96	568.3437319500481	1134.672910966896	2	568.3458862304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2224	2524	4745
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4751	16.85	NaN	13289	30	0	3404.5	0.039				-1	 	0	72	421.2419907785366	1260.7041429358098	3	421.242919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2225	2524	4745
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4768	16.884	NaN	94164	30	0	25738	0.181				-1	CSCQRCTE	8	92	522.1902386147988	1042.3659242963975	2	522.1927490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_CSC(Carbamidomethyl (C))QRC(Carbamidomethyl (C))TE_	CILP|p.R489Q|1|0.35|ENSG00000138615|chr15:65198820-65198820|C/T|missense_variant;ENSG00000138615|ENST00000261883|CILP	71.29570347882199	0.39610197767395533	6				NaN	NaN	0	NaN	2239	2527	4767
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4769	16.888	NaN	23609	30	0	3551.5	0.106				-1	 	0	77	458.7753774775699	915.5362020219399	2	458.7764587402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2240	2527	4767
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4770	16.89	NaN	11704	30	0	1370.8	0.106	+			36749	SHFGCTVGLK	10	78	524.7653580286652	1047.5161631241303	2	524.767333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SHFGCTVGLK_	ENSG00000118160|ENST00000236877|SLC8A2	56.72105179125745	0.3956618550748046	6				NaN	NaN	0	NaN	2241	2527	4767
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4771	16.892	NaN	4850.2	30	0	630.87	0.106			+	41883	SVTNKITKAR	10	56	373.2280883699528	1116.6624357100584	3	373.228759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVTNKITKAR_	REV__ENSG00000168280|ENST00000435030|KIF5C;REV__KIF5C|p.S816Vfs*68|1|0.35|ENSG00000168280|chr2:149005459-149005459|A/-|frameshift_variant;REV__nc|ENSG00000168280|O60282-2|KIF5C	25.57405402267927	0.6709832231498071	6				NaN	NaN	0	NaN	2242	2527	4767
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4772	16.893	NaN	7371.8	30	0	1185.7	0.106	+			39977	STMKTMEDK	9	76	535.7443914944254	1069.4742300556507	2	535.7472534179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STMKTMEDK_	EAPP|p.F278Sfs*4|1|0.34|ENSG00000129518|chr14:34516335-34516335|A/-|frameshift_variant;ENSG00000129518|ENST00000250454|EAPP;ENST00000555683.1_1_14:35005207-35008876:-|nuORF	90.60085204095205	0.06317133949006545	6				NaN	NaN	0	NaN	2243	2527	4767
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4773	16.895	NaN	3932.7	30	0	536.05	0.036			+	47810	VSKCLLPQF	9	67	345.52844308010145	1033.5634998405044	3	345.529541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VSKCLLPQF_	REV__ENST00000560723.5_1_15:81605599-81615081:-|nuORF	36.446750945000026	0.4619375763483977	6				NaN	NaN	0	NaN	2244	2527	4767
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4774	16.896	NaN	8092.4	30	0	2338.5	0.142			+	26609	LTYMISKKL	9	55	366.2193678127824	1095.6362740385473	3	366.22052001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LTYMISKKL_	REV__ENSG00000132681|ENST00000368081|ATP1A4;REV__ENST00000418334.5_1_1:160144048-160152563:+|nuORF	36.446750945000026	0.4619375763483977	6				NaN	NaN	0	NaN	2245	2527	4767
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4791	16.934	NaN	68427	30	0	10735	0.173	+			45688	VAAEKSFNK	9	94	497.2716348833613	NaN	0	497.2715759277344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VAAEKSFNK_	ENSG00000086589|ENST00000199814|RBM22;ENST00000520132.1_1_5:150071315-150073858:-|nuORF;nc|ENSG00000086589|Q9NW64-2|RBM22	158.07458414430337	0.008991063192168403	6				NaN	NaN	0	NaN	2259	2530	4790
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4792	16.937	NaN	19642	30	0	3688.5	0.106	+			22057	KSKGASAGRE	10	91	330.8494324689567	989.5264680070702	3	330.8503723144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KSKGASAGRE_	ENSG00000173473|ENST00000254480|SMARCC1;ENST00000483847.1_1_3:47712102-47719818:-|nuORF;SMARCC1|p.N815Kfs*2|1|0.32|ENSG00000173473|chr3:47636068-47636069|-/T|frameshift_variant	36.446750945000026	0.5818864909973037	6				NaN	NaN	0	NaN	2260	2530	4790
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4793	16.939	NaN	40274	30	0	6404.1	0.106				-1	 	0	97	483.77064306231694	965.5267331914339	2	483.771728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2261	2530	4790
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4794	16.941	NaN	7660.6	30	0	1619.7	0.106	+			35630	SCCPVGCSKC	10	56	348.4625452762539	1042.3658064289616	3	348.4639587402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_SCC(Carbamidomethyl (C))PVGCSKC_	ENSG00000198417|ENST00000334350|MT1F;ENST00000564295.1_1_16:56692857-56693073:+|nuORF	66.9202029811203	0.3029018092171124	6				NaN	NaN	0	NaN	2262	2530	4790
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4795	16.942	NaN	27768	30	0	4875.1	0.106				-1	 	0	77	322.84942989582566	965.5264602876771	3	322.85040283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2263	2530	4790
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4796	16.944	NaN	79834	30	0	23978	0.106				-1	 	0	91	486.78355561665137	971.5525583001028	2	486.78472900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2264	2530	4790
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4797	16.946	NaN	15560	30	0	2033.6	0.036				-1	CGVREARAAV	10	85	544.7883980340898	NaN	0	544.7883911132812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_C(Carbamidomethyl (C))GVREARAAV_	ENSG00000112294|ENST00000357578|ALDH5A1;nc|ENSG00000112294|P51649-2|ALDH5A1	47.95952297671804	0.31850267256932663	6				NaN	NaN	0	NaN	2265	2530	4790
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4814	16.982	NaN	106230	30	0	26294	0.11			+	33178	REVCTVLPGD	10	90	573.2846664321205	1144.554779931041	2	573.2864990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_REVC(Carbamidomethyl (C))TVLPGD_	REV__ENST00000490470.5_1_3:133407133-133426371:+|nuORF;REV__ENST00000497521.5_1_3:133407124-133418814:+|nuORF	82.7504851949679	0.1731497355276012	6				NaN	NaN	0	NaN	2279	2533	4813
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4815	16.984	NaN	91014	30	0	43880	0.082	+			22794	KVFGGTVHK	9	95	324.8590171770609	NaN	0	324.8590087890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVFGGTVHK_	ENSG00000163655|ENST00000496455|GMPS;GMPS|p.S473Lfs*26|1|0.37|ENSG00000163655|chr3:155922281-155922281|T/-|frameshift_variant;nc|ENSG00000163655|P49915-2|GMPS	82.7504851949679	0.061958946529908215	6				NaN	NaN	0	NaN	2280	2533	4813
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4816	16.985	NaN	114090	30	0	59597	0.102			+	18528	ISLFDVRCCCH	11	87	697.8042229419167	1393.5938929506333	2	697.805908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))ISLFDVRC(Carbamidomethyl (C))CCH_	REV__ENST00000317881.8_1_X:118604375-118604432:+|nuORF	54.776311868738084	0.3700837260462177	6				NaN	NaN	0	NaN	2281	2533	4813
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4817	16.987	NaN	37158	30	0	7875.6	0.106	+			29828	PKSNYLQQ	8	84	489.25617508488307	976.4977972365662	2	489.2575988769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PKSNYLQQ_	tr|U7T4T3|U7T4T3_FUSNUBD-FAE-likedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00543PE=4SV=1	79.45101966838831	0.3281480470254892	6				NaN	NaN	0	NaN	2282	2533	4813
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4818	16.989	NaN	18392	30	0	4816.7	0.106				-1	 	0	81	369.91204903772143	1106.7143177133644	3	369.9132080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2283	2533	4813
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4819	16.991	NaN	17522	30	0	2068.5	0.106	+			30990	QERMKAQL	8	75	502.2733635118861	1002.5321740905722	2	502.2746276855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QERMKAQL_	ENSG00000198208|ENST00000557413|RPS6KL1;ENST00000553646.1_1_14:75375979-75376912:-|nuORF;ENST00000555834.5_1_14:75375979-75389943:-|nuORF;nc|ENSG00000198208|Q9Y6S9-2|RPS6KL1	82.24051045832904	0.30490469762271794	6				NaN	NaN	0	NaN	2284	2533	4813
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4820	16.993	NaN	13089	30	0	4880.9	0.106	+			13538	GLSEVQLNHM	10	62	376.5219399787136	1126.5439905363407	3	376.52325439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GLSEVQLNHM_	ENSG00000139372|ENST00000392872|TDG;ENST00000542926.5_1_12:104373661-104376713:+|nuORF	33.921630207806714	0.6028135429846169	6				NaN	NaN	0	NaN	2285	2533	4813
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4821	16.994	NaN	9299.8	30	0	2798.4	0.036			+	38336	SRKGKHRR	8	59	342.21250672360634	1023.615690771019	3	342.2135009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_SRKGKHRR_	REV__CCAR2|p.R417Gfs*89|3|0.26|ENSG00000158941|chr8:22615462-22615462|C/-|frameshift_variant	12.959181472943097	0.7887000251064199	6				NaN	NaN	0	NaN	2286	2533	4813
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4839	17.032	NaN	51460	30	0	10358	0.214	+			23117	KVVRNRSR	8	85	507.81738083008025	1013.6202087269605	2	507.81878662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVVRNRSR_	ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;ENST00000447425.1_1_7:22813267-22813561:-|nuORF;ENST00000479856.1_1_17:8464744-8464891:+|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11	96.19043198914106	0.25873003980794995	6				NaN	NaN	0	NaN	2301	2536	4838
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4840	17.036	NaN	22910	30	0	5267.7	0.106	+			41976	SVYAGGRGPAK	11	91	531.7861900677701	1061.5578272023401	2	531.7884521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVYAGGRGPAK_	ENST00000296473.7_3_3:49967084-49967270:-|nuORF	96.0336014099291	0.0740748020614995	6				NaN	NaN	0	NaN	2302	2536	4838
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4841	17.038	NaN	9075.3	30	0	678.95	0.106			+	8316	EAKEEELKK	9	76	552.3030872214501	1102.5916215097002	2	552.306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EAKEEELKK_	REV__ENSG00000165699|ENST00000298552|TSC1;REV__nc|ENSG00000165699|Q92574-2|TSC1	87.69643885390035	0.07135982304947239	6				NaN	NaN	0	NaN	2303	2536	4838
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4842	17.04	NaN	6440.9	30	0	1519.2	0.106				-1	 	0	75	501.3071734862182	1000.5997940392364	2	501.30865478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2304	2536	4838
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4843	17.041	NaN	11460	30	0	2041	0.106			+	43815	TLPPRSPQ	8	74	448.25223975965275	894.4899265861055	2	448.2533874511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TLPPRSPQ_	REV__ENST00000586443.1_1_17:42429890-42430163:+|nuORF	76.7741389293348	0.3504530765139327	6				NaN	NaN	0	NaN	2305	2536	4838
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4844	17.043	NaN	7862.6	30	0	1203.4	0.032				-1	 	0	63	400.71200178632574	799.4094506394515	2	400.71331787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2306	2536	4838
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4845	17.044	NaN	3204.4	30	0	406.14	0.137				-1	 	0	52	404.73615054994616	807.4577481666923	2	404.73736572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2307	2536	4838
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4863	17.083	NaN	75475	30	0	24140	0.214	+			22123	KSNSYRHRE	9	97	588.7973720089747	1175.5801910847492	2	588.7992553710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSNSYRHRE_	ENSG00000186086|ENST00000495380|NBPF6;ENSG00000196427|ENST00000415641|NBPF4;nc|ENSG00000186086|Q5VWK0-2|NBPF6;nc|ENSG00000243967|Q86XG9|NBPF5P	110.11987700582712	0.028875675806141952	6				NaN	NaN	0	NaN	2322	2539	4862
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4864	17.087	NaN	30595	30	0	5498.2	0.106	+			17942	IGNLSSPVSP	10	95	485.7643247753088	969.5140966174176	2	485.7660217285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IGNLSSPVSP_	ENSG00000196531|ENST00000454682|NACA	54.776311868738084	0.41334902933431344	6				NaN	NaN	0	NaN	2323	2539	4862
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4865	17.089	NaN	26770	30	0	3091.1	0.106				-1	 	0	84	332.6732271646893	663.3319013961786	2	332.67425537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2324	2539	4862
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4866	17.091	NaN	12805	30	0	3227.3	0.106	+			6856	CKPWYAGA	8	66	448.2100575880245	894.405562242849	2	448.211181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_CKPWYAGA_	ENSG00000095585|ENST00000224337|BLNK;ENST00000485193.1_1_10:97959827-97964307:-|nuORF;nc|ENSG00000095585|Q8WV28-2|BLNK;nc|ENSG00000095585|Q8WV28-3|BLNK	69.09296820870183	0.4144562040832486	6				NaN	NaN	0	NaN	2325	2539	4862
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4867	17.093	NaN	4966.8	30	0	834	0.106	+			35081	SAFLVLVFL	9	58	336.87667759246625	1007.6082033775988	3	336.8776550292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SAFLVLVFL_	ENSG00000128039|ENST00000264228|SRD5A3	17.364965105453717	0.6112419832031293	6				NaN	NaN	0	NaN	2326	2539	4862
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4868	17.094	NaN	14472	30	0	2145.8	0.037				-1	 	0	76	561.3359526145673	1120.6573522959345	2	561.3377685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2327	2539	4862
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4869	17.095	NaN	5053.6	30	0	547.35	0.14			+	35223	SALASKVHQ	9	61	470.7647556158343	NaN	0	470.7638854980469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SALASKVHQ_	REV__ENSG00000105568|ENST00000322088|PPP2R1A;REV__ENSG00000137713|ENST00000527614|PPP2R1B;REV__ENST00000534521.5_1_11:111612322-111631898:-|nuORF;REV__nc|ENSG00000137713|P30154-2|PPP2R1B;REV__nc|ENSG00000137713|P30154-3|PPP2R1B;REV__nc|ENSG00000137713|P30154-5|PPP2R1B	41.42661286455405	0.26577678759562784	6				NaN	NaN	0	NaN	2328	2539	4862
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4887	17.134	NaN	23220	30	0	2916.6	0.214			+	7494	DGHGDQGRR	9	80	499.2311828949866	996.4478128567732	2	499.2327575683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DGHGDQGRR_	REV__ENSG00000203786|ENST00000606109|KPRP	42.396135135203025	0.392153681582562	6				NaN	NaN	0	NaN	2343	2542	4886
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4888	17.138	NaN	36444	30	0	6185.7	0.106				-1	 	0	95	541.283906337993	1080.553259742786	2	541.2858276367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2344	2542	4886
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4889	17.14	NaN	44776	30	0	13057	0.106			+	-1	TTCLYLPLT	9	98	361.1916078205362	1080.5529940618087	3	361.1927185058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_TTC(Carbamidomethyl (C))LYLPLT_	REV__ENST00000369306.7_1_1:145523400-145523604:+|nuORF	31.529811441608018	0.5085848003137583	6				NaN	NaN	0	NaN	2345	2542	4886
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4890	17.142	NaN	13679	30	0	7208.9	0.106				-1	 	0	62	502.2547200239145	1002.494887114629	2	502.2562255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2346	2542	4886
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4891	17.144	NaN	6006.5	30	0	436.21	0.106	+			45325	TVSETAKDLV	10	69	531.7861900677701	1061.5578272023401	2	531.2831420898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TVSETAKDLV_	ENSG00000117676|ENST00000374168|RPS6KA1;nc|ENSG00000117676|Q15418-2|RPS6KA1;nc|ENSG00000117676|Q15418-3|RPS6KA1;nc|ENSG00000117676|Q15418-4|RPS6KA1	44.377184641726394	0.5088115166961078	6				NaN	NaN	0	NaN	2347	2542	4886
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4892	17.146	NaN	18847	30	0	6796	0.035				-1	 	0	59	324.17879005466966	969.514540764209	3	324.1798400878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2348	2542	4886
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4893	17.146	NaN	12752	30	0	5704.9	0.142				-1	TSAACTTSVQS	11	66	371.49959062969094	1111.476942489273	3	371.500244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_TSAAC(Carbamidomethyl (C))TTSVQS_	COL17A1|p.E391Kfs*12|1|0.43|ENSG00000065618|chr10:104059690-104059690|T/-|frameshift_variant;COL17A1|p.P1229Rfs*22|1|0.39|ENSG00000065618|chr10:104034701-104034701|G/-|frameshift_variant;COL17A1|p.P847Qfs*219|1|0.17|ENSG00000065618|chr10:104042431-104042431|G/-|frameshift_variant;ENSG00000065618|ENST00000648076|COL17A1;nc|ENSG00000065618|Q9UMD9-2|COL17A1	27.64392233501311	0.6998289966465058	6				NaN	NaN	0	NaN	2349	2542	4886
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4911	17.186	NaN	23149	30	0	6593.6	0.214	+			11448	FNCDLIDSVD	10	72	570.7477903813636	1139.4810278295272	2	570.7496948242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FNCDLIDSVD_	ENST00000409195.5_2_2:168108454-168115870:+|nuORF;nc|ENSG00000163092|A4UGR9-4|XIRP2;nc|ENSG00000163092|A4UGR9-5|XIRP2;nc|ENSG00000163092|A4UGR9-6|XIRP2;nc|ENSG00000163092|A4UGR9-7|XIRP2	56.632244143249146	0.3964695498866976	6				NaN	NaN	0	NaN	2364	2545	4910
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4912	17.189	NaN	48293	30	0	12404	0.106	+			45610	TYPKMIPE	8	99	497.74957579863695	993.4845986640739	2	497.7509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_TYPKM(Oxidation (M))IPE_	ENSG00000123496|ENST00000243213|IL13RA2;IL13RA2|p.F376L|1|0.48|ENSG00000123496|chrX:115004095-115004095|A/C|missense_variant	73.97473282117947	0.3737790450121076	6				NaN	NaN	0	NaN	2365	2545	4910
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4913	17.191	NaN	10761	30	0	2581	0.106	+			14360	GTACGKYYR	9	82	538.2513922524034	1074.4882315716068	2	538.25341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_GTAC(Carbamidomethyl (C))GKYYR_	ENSG00000156482|ENST00000287038|RPL30;ENST00000480085.1_1_6:114160699-114160804:+|nuORF	95.81516180277367	0.04847050768394289	6				NaN	NaN	0	NaN	2366	2545	4910
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4914	17.193	NaN	15390	30	0	2410.9	0.106				-1	 	0	81	474.752144685223	947.489736437246	2	474.7532043457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2367	2545	4910
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4915	17.195	NaN	7815.9	30	0	1001.1	0.106			+	-1	EYVPMTEEG	9	79	535.721611123879	1069.428669314558	2	535.7233276367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_EYVPM(Oxidation (M))TEEG_	REV__ENSG00000101938|ENST00000372042|CHRDL1;REV__nc|ENSG00000101938|Q9BU40-3|CHRDL1;REV__nc|ENSG00000101938|Q9BU40-5|CHRDL1;REV__nc|ENSG00000101938|Q9BU40|CHRDL1	47.91560031466742	0.327412564698279	6				NaN	NaN	0	NaN	2368	2545	4910
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4916	17.197	NaN	14688	30	0	4314.3	0.035			+	4982	ATREQPVW	8	55	329.50663844205394	985.4980859263619	3	329.5077819824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATREQPVW_	REV__ENSG00000130338|ENST00000367097|TULP4	30.503639358989545	0.7238069182250283	6				NaN	NaN	0	NaN	2369	2545	4910
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4917	17.197	NaN	10429	30	0	4353	0.138			+	42168	SYTLCLPD	8	53	456.21311505103995	910.4116771688799	2	456.2142333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SYTLCLPD_	REV__ENSG00000185010|ENST00000360256|F8;REV__F8|p.E1101Rfs*17|1|0.25|ENSG00000185010|chrX:154930489-154930490|-/T|frameshift_variant;REV__F8|p.E1292Rfs*16|2|0.53|ENSG00000185010|chrX:154929920-154929920|T/-|frameshift_variant;REV__F8|p.E1988Rfs*4|1|0.36|ENSG00000185010|chrX:154903942-154903943|-/T|frameshift_variant;REV__F8|p.G1291Rfs*29|1|0.48|ENSG00000185010|chrX:154929919-154929920|-/T|frameshift_variant;REV__F8|p.L419Pfs*5|1|0.04|ENSG00000185010|chrX:154966441-154966442|-/G|frameshift_variant;REV__F8|p.N982Mfs*22|1|0.31|ENSG00000185010|chrX:154930845-154930845|T/-|frameshift_variant	40.5726180659479	0.6527593143185008	6				NaN	NaN	0	NaN	2370	2545	4910
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4935	17.237	NaN	78912	30	0	18150	0.153	+			31373	QKEFLKAAS	9	71	511.2875908372196	1020.5606287412393	2	511.2892150878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QKEFLKAAS_	ENST00000558438.1_1_15:99688849-99696475:-|nuORF	82.24051045832904	0.08786059719216216	6				NaN	NaN	0	NaN	2385	2548	4934
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4936	17.239	NaN	39439	30	0	12516	0.106	+			18565	ISNSKGQKTK	10	86	364.2121327371888	1089.6145688117665	3	364.2132263183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ISNSKGQKTK_	ENSG00000125885|ENST00000610722|MCM8;nc|ENSG00000125885|Q9UJA3-2|MCM8;nc|ENSG00000125885|Q9UJA3-3|MCM8;nc|ENSG00000125885|Q9UJA3-4|MCM8	56.632244143249146	0.3964695498866976	6				NaN	NaN	0	NaN	2386	2548	4934
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4937	17.241	NaN	34230	30	0	6826	0.106	+			586	ADLDLDMF	8	82	478.20805598932935	954.4015590454587	2	478.20904541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_ADLDLDM(Oxidation (M))F_	ENSG00000204060|ENST00000641094|FOXO6;ENST00000372591.1_2_1:41848017-41848350:+|nuORF	52.29916861842294	0.578018602984656	6				NaN	NaN	0	NaN	2387	2548	4934
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4938	17.243	NaN	11276	30	0	2739.5	0.106				-1	 	0	51	413.18908314073263	824.3636133482653	2	413.190185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2388	2548	4934
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4939	17.245	NaN	52565	30	0	8638.6	0.106	+			9083	EGICSLVEL	9	87	481.7473143221754	961.4800757111508	2	481.7482604980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EGICSLVEL_	ENSG00000153107|ENST00000341068|ANAPC1;ENST00000454465.1_1_2:87355723-87398314:+|nuORF	79.45101966838831	0.09992237243120712	6				NaN	NaN	0	NaN	2389	2548	4934
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4940	17.247	NaN	7432.7	30	0	2099.9	0.106	+			21887	KRPRVKLSD	9	75	549.840643698236	NaN	0	549.8406982421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KRPRVKLSD_	DCLK3|p.R110Gfs*69|3|0.36|ENSG00000163673|chr3:36738333-36738333|G/-|frameshift_variant	26.69291269510374	0.34280015626154364	6				NaN	NaN	0	NaN	2390	2548	4934
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4941	17.249	NaN	3741.5	30	0	646.7	0.036			+	25173	LLWFFIIK	8	68	540.3360046262644	1078.6574563193287	2	540.3380126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LLWFFIIK_	REV__ENST00000083182.7_1_17:58533662-58538045:-|nuORF	31.57888975003103	0.7155046476286219	6				NaN	NaN	0	NaN	2391	2548	4934
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4959	17.287	NaN	14104	30	0	1904.1	0.214	+			13046	GEVYKCQSC	9	80	508.7121544293787	1015.4097559255574	2	508.7142639160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEVYKCQSC_	tr|U7SMB4|U7SMB4_FUSNUMetallothioneinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01889PE=4SV=1	44.116797842482775	0.37197099687881774	6				NaN	NaN	0	NaN	2406	2551	4958
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4960	17.29	NaN	41144	30	0	4793.8	0.106			+	21550	KNTRDTINV	9	97	530.7917037509098	1059.5688545686196	2	530.7952880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KNTRDTINV_	REV__TBC1D15|p.R400I|1|0.26|ENSG00000121749|chr12:71897906-71897906|G/T|missense_variant	82.24051045832904	0.08786059719216216	6				NaN	NaN	0	NaN	2407	2551	4958
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4961	17.292	NaN	11932	30	0	1286.5	0.106	+			49247	VVNPKYEGK	9	76	517.2859912933733	1032.5574296535465	2	517.287841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVNPKYEGK_	ENSG00000150093|ENST00000302278|ITGB1	106.68306549817024	0.032382560583716295	6				NaN	NaN	0	NaN	2408	2551	4958
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4962	17.294	NaN	233360	30	0	39041	0.106	+			41437	SVNGKVLSK	9	122	466.28048876856474	930.5464246039295	2	466.2821960449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVNGKVLSK_	ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2;NOMO1|p.P1102Hfs*42|1|0.36|ENSG00000103512|chr16:14886838-14886838|C/-|frameshift_variant;NOMO1|p.P141Sfs*12|1|0.33|ENSG00000103512|chr16:14846592-14846593|-/AG|frameshift_variant	125.68205650279488	0.017759985800556374	6				NaN	NaN	0	NaN	2409	2551	4958
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4963	17.296	NaN	23590	30	0	10017	0.106	+			24453	LGFEPRGTAI	10	71	354.19756946085533	1059.570878982766	3	354.1988525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LGFEPRGTAI_	DISP1|p.E1470Gfs*5|1|0.31|ENSG00000154309|chr1:223005800-223005801|-/G|frameshift_variant;DISP1|p.N862Tfs*64|1|0.45|ENSG00000154309|chr1:223003979-223003979|A/-|frameshift_variant;DISP1|p.S1299Ffs*6|1|0.05|ENSG00000154309|chr1:223005292-223005293|-/TTTG|frameshift_variant;ENSG00000154309|ENST00000675850|DISP1	31.529811441608018	0.6223461015008678	6				NaN	NaN	0	NaN	2410	2551	4958
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4964	17.298	NaN	9736.8	30	0	2018.2	0.036			+	-1	VVLARMCGK	9	81	345.1930378364855	1032.5572841096564	3	345.1941223144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_VVLARMC(Carbamidomethyl (C))GK_	REV__APC|p.A531V|1|0.3|ENSG00000134982|chr5:112827972-112827972|C/T|missense_variant	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	2411	2551	4958
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4965	17.298	NaN	10284	30	0	4364.5	0.14	+			25957	LSIIYVCAL	9	75	332.19312620507463	993.5575492154239	3	332.19415283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSIIYVCAL_	ENST00000252674.8_2_19:6212397-6212727:-|nuORF	25.450171626174864	0.5654022654467333	6				NaN	NaN	0	NaN	2412	2551	4958
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4983	17.336	NaN	56394	30	0	7170.2	0.214	+			35015	SACHKYFEK	9	83	585.2719197608163	1168.5292865884326	2	585.2742309570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SAC(Carbamidomethyl (C))HKYFEK_	ENSG00000163993|ENST00000296370|S100P;ENST00000513778.1_1_4:6695618-6698766:+|nuORF;S100P|p.T82M|1|0.3|ENSG00000163993|chr4:6696999-6696999|C/T|missense_variant	120.8684288430529	0.02067403653475984	6				NaN	NaN	0	NaN	2427	2554	4982
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4984	17.339	NaN	22062	30	0	2784	0.106	+			31914	QQLHAAMSQ	9	70	515.2427411301081	NaN	0	515.2427368164062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_QQLHAAM(Oxidation (M))SQ_	ENSG00000131941|ENST00000254260|RHPN2;nc|ENSG00000131941|Q8IUC4-2|RHPN2;nc|ENSG00000258628|A8MT19|RHPN2P1	56.43379154798735	0.16452882468284893	6				NaN	NaN	0	NaN	2428	2554	4982
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4985	17.341	NaN	18056	30	0	6628.7	0.106			+	12776	GELPLPLSQ	9	75	477.26953543213386	952.5245179310677	2	477.2708435058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GELPLPLSQ_	REV__ENST00000558939.5_1_15:70341027-70341300:-|nuORF	71.87747018426188	0.13267044672804276	6				NaN	NaN	0	NaN	2429	2554	4982
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4986	17.343	NaN	17607	30	0	3079	0.106				-1	 	0	86	497.78605804341805	993.5575631536361	2	497.7875061035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2430	2554	4982
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4987	17.345	NaN	11832	30	0	1707.4	0.106	+			8605	ECKSGWRPG	9	78	510.2401820923953	1018.4658112515906	2	510.2413024902344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ECKSGWRPG_	ENST00000321599.8_2_3:49785261-49785576:-|nuORF	55.50420428727701	0.2510918378945873	6				NaN	NaN	0	NaN	2431	2554	4982
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4988	17.347	NaN	2844.9	30	0	302.66	0.106	+			36937	SILHNLSH	8	53	460.75051415601183	919.4864753788237	2	460.7517395019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SILHNLSH_	ENSG00000173801|ENST00000393931|JUP	35.61828744233558	0.6843154725607303	6				NaN	NaN	0	NaN	2432	2554	4982
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	4989	17.348	NaN	11195	30	0	2135.1	0.035				-1	VLNSLDKM	8	68	489.2503147804544	976.4860766277088	2	489.25177001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))VLNSLDKM(Oxidation (M))_	ENSG00000140598|ENST00000268206|EFL1;ENST00000558187.5_1_15:84748925-84782396:+|nuORF;ENST00000560401.5_1_15:84748925-84771641:+|nuORF;nc|ENSG00000140598|Q7Z2Z2-2|EFL1	40.5726180659479	0.6527593143185008	6				NaN	NaN	0	NaN	2433	2554	4982
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5000	17.372	NaN	73316	30	0	14292	0.214	+			29917	PLRPPPPPSR	10	109	371.8888955419066	1112.6448572259198	3	371.89019775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PLRPPPPPSR_	ENST00000219368.7_1_16:74773991-74808682:-|nuORF	39.252832667884924	0.5560298534376815	6				NaN	NaN	0	NaN	2441	2557	4999
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5001	17.376	NaN	38840	30	0	10330	0.106				-1	 	0	80	453.7468259340302	905.4790989348604	2	453.7480773925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2442	2557	4999
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5002	17.378	NaN	12814	30	0	1690.4	0.106			+	33245	RGATRPRK	8	81	471.2912128967756	940.5678728603513	2	471.2923583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RGATRPRK_	REV__PLEKHG6|p.T599Hfs*71|1|0.34|ENSG00000008323|chr12:6327376-6327377|-/A|frameshift_variant	60.97194046774394	0.49215940876911696	6				NaN	NaN	0	NaN	2443	2557	4999
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5003	17.38	NaN	10244	30	0	843.6	0.106	+			44747	TTMKVHIKR	9	82	557.3299720096512	1112.6453910861023	2	557.3320922851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TTMKVHIKR_	ENSG00000169894|ENST00000379458|MUC3A;nc|ENSG00000169894|Q02505-5|MUC3A	101.25262130126117	0.03792372629710479	6				NaN	NaN	0	NaN	2444	2557	4999
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5004	17.382	NaN	4784.3	30	0	620.74	0.106			+	19579	KCYHLVLK	8	74	502.29130530600156	1002.5680576788031	2	502.29296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KCYHLVLK_	REV__ENSG00000145782|ENST00000509910|ATG12	44.116797842482775	0.6307669463330267	6				NaN	NaN	0	NaN	2445	2557	4999
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5005	17.384	NaN	5202.8	30	0	547.04	0.106			+	32856	RCVPAADPLR	10	68	549.3005514542143	NaN	0	549.3007202148438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RCVPAADPLR_	REV__ENST00000586944.5_1_19:797434-805231:+|nuORF	36.446750945000026	0.3805027428805705	6				NaN	NaN	0	NaN	2446	2557	4999
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5006	17.385	NaN	8809.5	30	0	1444.3	0.035			+	44453	TSNKRKRR	8	79	523.3204207596456	1044.626288586091	2	524.29345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TSNKRKRR_	REV__ENSG00000169744|ENST00000304523|LDB2;REV__ENST00000508918.5_1_4:16504706-16675844:-|nuORF;REV__nc|ENSG00000169744|O43679-2|LDB2;REV__nc|ENSG00000169744|O43679-3|LDB2	30.503639358989545	0.7238069182250283	6				NaN	NaN	0	NaN	2447	2557	4999
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5024	17.423	NaN	52108	30	0	7158.2	0.214			+	23823	LCSFHKFR	8	108	519.2709068259798	1036.5272607187594	2	519.2725219726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LCSFHKFR_	REV__ENST00000531272.6_1_11:66249671-66254026:+|nuORF	71.87747018426188	0.391254423828572	6				NaN	NaN	0	NaN	2462	2560	5023
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5025	17.427	NaN	28995	30	0	4089.1	0.106	+			5951	AVLKHIENK	9	84	526.3150193156645	1050.6154856981289	2	526.31689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVLKHIENK_	ENSG00000160695|ENST00000621676|VPS11;nc|ENSG00000160695|Q9H270|VPS11	140.11223852658463	0.010427410095706195	6				NaN	NaN	0	NaN	2463	2560	5023
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5026	17.429	NaN	13800	30	0	3327.5	0.106				-1	 	0	72	523.3204207596456	1044.626288586091	2	523.3221435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2464	2560	5023
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5027	17.431	NaN	29996	30	0	10182	0.106				-1	 	0	93	351.2123144249163	1050.615113874949	3	351.2135009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2465	2560	5023
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5028	17.432	NaN	5165.4	30	0	1756.5	0.106			+	-1	VPLFKMKV	8	63	326.5335276431442	976.5787535296326	3	326.53448486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_VPLFKM(Oxidation (M))KV_	REV__ENSG00000140287|ENST00000267845|HDC;REV__ENST00000558679.1_1_15:50546296-50557931:-|nuORF;REV__ENST00000558761.5_1_15:50545740-50557820:-|nuORF;REV__ENST00000559190.5_1_15:50545740-50555509:-|nuORF;REV__nc|ENSG00000140287|P19113-2|HDC	21.9598887501803	0.7897753010812679	6				NaN	NaN	0	NaN	2466	2560	5023
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5029	17.434	NaN	42129	30	0	18178	0.036	+			30569	QAMKQWEY	8	87	542.2497913864554	1082.4850298397107	2	542.2523803710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QAMKQWEY_	ENSG00000144893|ENST00000687756|MED12L;MED12L|p.K248Nfs*5|1|0.32|ENSG00000144893|chr3:151158702-151158702|A/-|frameshift_variant;MED12L|p.L1417Sfs*14|1|0.06|ENSG00000144893|chr3:151378044-151378044|C/-|frameshift_variant;MED12L|p.N1494Rfs*10|1|0.1|ENSG00000144893|chr3:151380219-151380220|-/GAAATAATGCATT|frameshift_variant;MED12L|p.S1098Ffs*63|1|0.23|ENSG00000144893|chr3:151367710-151367711|-/T|frameshift_variant;MED12L|p.S1098Pfs*15|1|0.19|ENSG00000144893|chr3:151367711-151367711|T/-|frameshift_variant;MED12L|p.T1760Pfs*44|1|0.42|ENSG00000144893|chr3:151388100-151388100|A/-|frameshift_variant;nc|ENSG00000144893|Q86YW9-2|MED12L;nc|ENSG00000144893|Q86YW9-3|MED12L;nc|ENSG00000144893|Q86YW9-4|MED12L;nc|ENSG00000144893|Q86YW9|MED12L	73.97473282117947	0.3737790450121076	6				NaN	NaN	0	NaN	2467	2560	5023
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5030	17.435	NaN	5820.2	30	0	976.02	0.14				-1	 	0	49	400.71200178632574	799.4094506394515	2	400.71343994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2468	2560	5023
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5048	17.474	NaN	58271	30	0	24381	0.214			+	19016	IWEMARAS	8	91	482.2393295266619	962.4641061201238	2	482.24041748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IWEMARAS_	REV__ENSG00000067057|ENST00000381125|PFKP;REV__nc|ENSG00000067057|Q01813-2|PFKP	76.84663266511073	0.3498490246073164	6				NaN	NaN	0	NaN	2483	2563	5047
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5049	17.478	NaN	9107.1	30	0	1155.8	0.106	+			7660	DKTLRTRSK	9	72	368.8877502325675	1103.6414212979025	3	368.8888854980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DKTLRTRSK_	ENSG00000147488|ENST00000689386|ST18;ST18|p.E810Kfs*5|1|0.31|ENSG00000147488|chr8:52133074-52133074|T/-|frameshift_variant;ST18|p.F884Lfs*27|1|0.33|ENSG00000147488|chr8:52131972-52131972|A/-|frameshift_variant;ST18|p.L941Hfs*8|1|0.04|ENSG00000147488|chr8:52118375-52118376|-/AACTTGTGTGAAAATATAT|frameshift_variant;ST18|p.N621Ifs*10|2|0.23|ENSG00000147488|chr8:52149922-52149922|T/-|frameshift_variant;ST18|p.S141Ffs*8|1|0.06|ENSG00000147488|chr8:52172441-52172442|-/CATAAAAA|frameshift_variant	42.86426827375447	0.38666266728046506	6				NaN	NaN	0	NaN	2484	2563	5047
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5050	17.48	NaN	29817	30	0	3519.2	0.106				-1	 	0	88	547.7938415178313	1093.5731301024625	2	547.7959594726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2485	2563	5047
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5051	17.482	NaN	4606.5	30	0	475.36	0.106				-1	 	0	59	461.2597240004538	920.5048950677076	2	461.2609558105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2486	2563	5047
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5052	17.484	NaN	13986	30	0	1937	0.106				-1	 	0	78	550.3435517509	1098.6725505686	2	550.3456420898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2487	2563	5047
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5053	17.486	NaN	6440.2	30	0	1251.9	0.036				-1	 	0	84	552.82826564912	1103.64197836504	2	552.8302001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2488	2563	5047
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5054	17.486	NaN	10447	30	0	2111.9	0.14			+	24603	LGREGRWP	8	75	485.7643247753088	969.5140966174176	2	485.765869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LGREGRWP_	REV__UBALD1|p.L158Wfs*66|1|0.51|ENSG00000153443|chr16:4609695-4609695|G/-|frameshift_variant	49.44154591367651	0.597725784090933	6				NaN	NaN	0	NaN	2489	2563	5047
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5072	17.526	NaN	125390	30	0	16576	0.146			+	18663	ISVPADELKR	10	102	376.55220169487967	1126.634775684839	3	376.5536804199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ISVPADELKR_	REV__ENSG00000225526|ENST00000564146|MKRN2OS	37.81151784470057	0.569310847604193	6				NaN	NaN	0	NaN	2504	2566	5071
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5073	17.528	NaN	35547	30	0	6035.5	0.106	+			2916	ASCGTRSAGR	10	89	511.74369059390375	1021.4728282546075	2	511.745361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_ASC(Carbamidomethyl (C))GTRSAGR_	ENSG00000106803|ENST00000223641|SEC61B;SEC61B|p.M55Cfs*22|1|0.43|ENSG00000106803|chr9:99227954-99227954|G/-|frameshift_variant	90.60085204095205	0.12763388345653318	6				NaN	NaN	0	NaN	2505	2566	5071
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5074	17.53	NaN	69750	30	0	38803	0.106			+	32009	QRLGPSWKR	9	86	564.3249019436989	1126.6352509541978	2	564.3272094726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QRLGPSWKR_	REV__ZFHX3|p.H3611Tfs*83|1|0.4|ENSG00000140836|chr16:72787445-72787445|G/-|frameshift_variant	82.7504851949679	0.08565546331141553	6				NaN	NaN	0	NaN	2506	2566	5071
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5075	17.532	NaN	36201	30	0	4768.7	0.106				-1	 	0	93	547.7268005806122	1093.4390482280244	2	547.7288818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2507	2566	5071
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5076	17.534	NaN	8703.2	30	0	3605.1	0.106			+	21923	KRVAFSATR	9	72	518.3063425930534	NaN	0	518.3064575195312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KRVAFSATR_	REV__ENSG00000100347|ENST00000350028|SAMM50;REV__ENST00000474323.5_1_22:44371844-44392260:+|nuORF	54.776311868738084	0.17377682019723872	6				NaN	NaN	0	NaN	2508	2566	5071
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5077	17.536	NaN	15053	30	0	3215.7	0.106	+			49006	VVGPELHHK	9	77	508.28803236428007	NaN	0	508.2882385253906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VVGPELHHK_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	77.31757898189308	0.08057531075035683	6				NaN	NaN	0	NaN	2509	2566	5071
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5078	17.537	NaN	24638	30	0	10791	0.036			+	30318	PTQLRSRSA	9	67	339.193215555214	1014.557817265842	3	339.19427490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PTQLRSRSA_	REV__ENST00000310574.7_1_2:27434356-27435124:-|nuORF	31.529811441608018	0.5085848003137583	6				NaN	NaN	0	NaN	2510	2566	5071
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5096	17.574	NaN	6444.1	30	0	898.53	0.214	+			21389	KMLINFLSKN	10	75	604.3471706163054	1206.6797882994108	2	604.3489379882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KMLINFLSKN_	nc|ENSG00000213439|P0C628|OR5AC1	79.48907831485694	0.19979514868675113	6				NaN	NaN	0	NaN	2525	2569	5095
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5097	17.577	NaN	9132.1	30	0	621.16	0.106	+			38768	SSLVLVMLQ	9	82	495.2887679399392	988.5629829466784	2	495.2900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSLVLVMLQ_	ENST00000461893.5_1_1:1720620-1721958:-|nuORF	56.43379154798735	0.2433427591689151	6				NaN	NaN	0	NaN	2526	2569	5095
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5098	17.58	NaN	11068	30	0	1501.5	0.106	+			34149	RSWNWILHK	9	77	620.3419007142973	1238.6692484953944	2	620.3438720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RSWNWILHK_	ENST00000606522.1_1_6:10744394-10747789:-|nuORF	48.601550744091256	0.3193666407755445	6				NaN	NaN	0	NaN	2527	2569	5095
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5099	17.581	NaN	5173.2	30	0	1384.7	0.106				-1	 	0	73	481.76562992280105	961.5167069124021	2	482.2679138183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2528	2569	5095
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5100	17.583	NaN	3306	30	0	480.53	0.106	+			3248	ASLGASVHK	9	52	435.24530138090915	NaN	0	435.2453918457031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASLGASVHK_	ENSG00000239900|ENST00000623063|ADSL;nc|ENSG00000239900|P30566-2|ADSL	65.46538089061403	0.1260090208616529	6				NaN	NaN	0	NaN	2529	2569	5095
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5101	17.585	NaN	1649.4	30	0	231.34	0.034				-1	 	0	43	456.2495226226049	910.4844923120098	2	456.25067138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2530	2569	5095
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5102	17.585	NaN	7877.6	30	0	1926.1	0.143	+			21891	KRQTSILIQK	10	80	607.884327131233	1213.754101329266	2	607.8861694335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KRQTSILIQK_	ENSG00000164266|ENST00000296695|SPINK1	65.15724298150197	0.31893571707528906	6				NaN	NaN	0	NaN	2531	2569	5095
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5120	17.625	NaN	15320	30	0	3429.9	0.214	+			2873	ASAPVTVKR	9	83	464.78076412968545	927.5469753261709	2	464.7820129394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASAPVTVKR_	ENSG00000174579|ENST00000309993|MSL2;MSL2|p.K455Nfs*37|1|0.08|ENSG00000174579|chr3:136151516-136151516|T/-|frameshift_variant;MSL2|p.L557*|1|0.09|ENSG00000174579|chr3:136151211-136151211|A/-|frameshift_variant;nc|ENSG00000174579|Q9HCI7-2|MSL2	78.26377905018397	0.10505600812668463	6				NaN	NaN	0	NaN	2546	2572	5119
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5121	17.629	NaN	17814	30	0	4573.9	0.106			+	44406	TSLPLFCIL	9	79	503.78608252209165	1005.5576121109833	2	503.78753662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TSLPLFCIL_	REV__ENST00000578804.5_2_17:62499940-62500153:-|nuORF	54.76467175910256	0.25725661233076036	6				NaN	NaN	0	NaN	2547	2572	5119
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5122	17.631	NaN	13490	30	0	2348.4	0.106	+			22342	KTGEVLDTK	9	72	495.77685639442933	NaN	0	495.77679443359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KTGEVLDTK_	ENSG00000196937|ENST00000359943|FAM3C	101.45984612302182	0.018494728971010316	6				NaN	NaN	0	NaN	2548	2572	5119
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5123	17.633	NaN	5386.6	30	0	810.54	0.106	+			18728	ITGTNVVKK	9	62	480.29760557738166	NaN	0	480.2975769042969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ITGTNVVKK_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	98.62937762414208	0.024200618960070384	6				NaN	NaN	0	NaN	2549	2572	5119
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5124	17.634	NaN	12850	30	0	2164.9	0.106				-1	 	0	74	401.2256657806682	800.4367786281364	2	401.22698974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2550	2572	5119
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5125	17.636	NaN	6298.6	30	0	840.9	0.036			+	24917	LKQEEIRR	8	75	536.3176348524788	NaN	0	536.3176879882812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LKQEEIRR_	REV__ENSG00000162614|ENST00000334785|NEXN;REV__nc|ENSG00000162614|Q0ZGT2-2|NEXN;REV__nc|ENSG00000162614|Q0ZGT2-3|NEXN;REV__nc|ENSG00000162614|Q0ZGT2-4|NEXN;REV__NEXN|p.N590Tfs*5|1|0.2|ENSG00000162614|chr1:77942566-77942566|A/-|frameshift_variant	53.351449002276354	1.7418937515398478	6				NaN	NaN	0	NaN	2551	2572	5119
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5126	17.637	NaN	17927	30	0	3339.3	0.139				-1	 	0	66	411.2099645630608	820.4053761929216	2	411.211181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2552	2572	5119
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5144	17.676	NaN	10276	30	0	1578.5	0.215				-1	 	0	68	487.7527076852782	973.4908624373564	2	487.75408935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2567	2575	5143
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5145	17.68	NaN	26339	30	0	10992	0.106				-1	 	0	86	362.5353231328678	1084.5841399988035	3	362.53643798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2568	2575	5143
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5146	17.682	NaN	8749.2	30	0	2399.9	0.106				-1	 	0	64	353.556032677609	1057.646268633027	3	353.55712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2569	2575	5143
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5147	17.684	NaN	53409	30	0	15948	0.106				-1	 	0	63	327.53715858097746	979.5896463431325	3	327.5381164550781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2570	2575	5143
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5148	17.686	NaN	53778	30	0	20302	0.106				-1	 	0	88	490.8021506657068	979.5897483982136	2	490.80352783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2571	2575	5143
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5149	17.687	NaN	16981	30	0	2600.9	0.036	+			3236	ASLCLKKPAF	10	55	359.87586821438697	1076.605775243361	3	359.8769226074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASLCLKKPAF_	ENST00000356948.10_2_19:811026-811482:+|nuORF	27.047317107675042	0.6589519614906109	6				NaN	NaN	0	NaN	2572	2575	5143
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5150	17.688	NaN	4842	30	0	476.95	0.138	+			46321	VEKKATGE	8	54	431.23647386820585	860.4583948032117	2	431.2373352050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VEKKATGE_	ENST00000607967.1_1_10:104402974-104403835:-|nuORF	60.11826168202944	0.5006107059937851	6				NaN	NaN	0	NaN	2573	2575	5143
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5168	17.727	NaN	6536.7	30	0	613.12	0.214	+			30411	PWCPLDLR	8	77	528.7682221228289	1055.5218913124577	2	528.77001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_PWC(Carbamidomethyl (C))PLDLR_	ENSG00000151503|ENST00000534548|NCAPD3;NCAPD3|p.A322Lfs*24|1|0.31|ENSG00000151503|chr11:134206654-134206654|G/-|frameshift_variant;NCAPD3|p.S1143Ffs*5|1|0.35|ENSG00000151503|chr11:134168141-134168142|-/A|frameshift_variant	68.484700416344	0.4195245774506064	6				NaN	NaN	0	NaN	2588	2578	5167
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5169	17.731	NaN	13335	30	0	1678.6	0.106	+			46838	VIFANTTSIVT	11	77	583.3274416557978	1164.6403303783954	2	583.329345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VIFANTTSIVT_	sp|Q6SWC9|RL13_HCMVMMembraneproteinRL13OS=Humancytomegalovirus(strainMerlin)OX=295027GN=RL13PE=3SV=1	87.69643885390035	0.10820476749497838	6				NaN	NaN	0	NaN	2589	2578	5167
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5170	17.733	NaN	23542	30	0	2912.1	0.106				-1	 	0	81	568.3437319500481	1134.672910966896	2	568.3150634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2590	2578	5167
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5171	17.735	NaN	7838.1	30	0	3634.6	0.106	+			28463	NFSQEEWEWLN	11	77	741.3204733746081	1480.6263938160162	2	741.3220825195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NFSQEEWEWLN_	ENSG00000198440|ENST00000333201|ZNF583;ENST00000436972.3_1_19:56918456-56925814:+|nuORF;ENST00000539211.6_1_19:56918456-56925471:+|nuORF	28.081489160057373	0.6952392775027776	6				NaN	NaN	0	NaN	2591	2578	5167
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5172	17.737	NaN	91384	30	0	24917	0.106			+	22108	KSNEWQRRT	9	99	602.8128487899814	1203.6111446467628	2	602.81494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KSNEWQRRT_	REV__ENST00000468758.1_1_2:134877617-135010711:+|nuORF	76.7741389293348	0.11149722112137898	6				NaN	NaN	0	NaN	2592	2578	5167
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5173	17.739	NaN	6103.8	30	0	794.39	0.034	+			41438	SVNGKVLSK	9	66	466.28048876856474	930.5464246039295	2	466.2820739746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVNGKVLSK_	ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2;NOMO1|p.P1102Hfs*42|1|0.36|ENSG00000103512|chr16:14886838-14886838|C/-|frameshift_variant;NOMO1|p.P141Sfs*12|1|0.33|ENSG00000103512|chr16:14846592-14846593|-/AG|frameshift_variant	93.5975768576971	0.05472259948179787	6				NaN	NaN	0	NaN	2593	2578	5167
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5174	17.739	NaN	5418.4	30	0	435.2	0.138				-1	 	0	65	452.25963959720264	902.5047262612053	2	452.2607727050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2594	2578	5167
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5192	17.777	NaN	38690	30	0	3300.6	0.214			+	50211	WMRLYQQK	8	90	576.8022900776455	1151.5900272220908	2	576.8042602539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WMRLYQQK_	REV__PHF14|p.E136Kfs*65|1|0.6|ENSG00000106443|chr7:10982660-10982660|A/-|frameshift_variant	76.7741389293348	0.3504530765139327	6				NaN	NaN	0	NaN	2609	2581	5191
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5193	17.781	NaN	29856	30	0	16944	0.106			+	36753	SHHEAMRPNWG	11	77	669.2934070810974	1336.5722612289946	2	669.2951049804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_SHHEAM(Oxidation (M))RPNWG_	REV__ENST00000507229.5_1_1:1551767-1563881:+|nuORF;REV__nc|ENSG00000197530|Q96AX9-6|MIB2	70.8162118820467	0.22893521292419713	6				NaN	NaN	0	NaN	2610	2581	5191
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5194	17.783	NaN	20533	30	0	6249	0.106				-1	 	0	70	458.73897055207306	915.4633881709461	2	458.740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2611	2581	5191
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5195	17.785	NaN	18475	30	0	5188.3	0.106	+			15221	GTSSSAASSLK	11	68	498.2534958364599	NaN	0	498.2536926269531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTSSSAASSLK_	ARID1A|p.F2141Sfs*59|5|0.26|ENSG00000117713|chr1:26780313-26780313|C/-|frameshift_variant;ARID1A|p.K1161Sfs*19|1|0.29|ENSG00000117713|chr1:26772573-26772573|A/-|frameshift_variant;ARID1A|p.M1564Hfs*8|1|0.18|ENSG00000117713|chr1:26774910-26774911|-/C|frameshift_variant;ARID1A|p.N1475Tfs*6|1|0.36|ENSG00000117713|chr1:26774648-26774648|A/-|frameshift_variant;ARID1A|p.P1115Qfs*46|1|0.32|ENSG00000117713|chr1:26771260-26771260|C/-|frameshift_variant;ARID1A|p.P1326Rfs*155|1|0.15|ENSG00000117713|chr1:26773685-26773685|C/-|frameshift_variant;ARID1A|p.P1406Rfs*37|1|0.42|ENSG00000117713|chr1:26774444-26774448|CCCCA/-|frameshift_variant;ARID1A|p.P1568Lfs*44|1|0.14|ENSG00000117713|chr1:26774926-26774926|C/-|frameshift_variant;ARID1A|p.P1575Hfs*37|1|0.38|ENSG00000117713|chr1:26774947-26774947|C/-|frameshift_variant;ARID1A|p.P2114Rfs*21|1|0.46|ENSG00000117713|chr1:26780236-26780236|C/-|frameshift_variant;ARID1A|p.V2244Gfs*34|1|0.31|ENSG00000117713|chr1:26780626-26780627|-/G|frameshift_variant;ENSG00000049618|ENST00000636930|ARID1B;ENSG00000117713|ENST00000324856|ARID1A;nc|ENSG00000049618|Q8NFD5-1|ARID1B;nc|ENSG00000049618|Q8NFD5-2|ARID1B;nc|ENSG00000049618|Q8NFD5|ARID1B;nc|ENSG00000117713|O14497-2|ARID1A;nc|ENSG00000117713|O14497-3|ARID1A	136.5150327860613	5.9279109221373204E-05	6				NaN	NaN	0	NaN	2612	2581	5191
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5196	17.787	NaN	9288.4	30	0	2624.4	0.106				-1	VGMVFKLDEV	10	64	384.8704577759469	1151.5895439280407	3	384.8717041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_VGM(Oxidation (M))VFKLDEV_	ENST00000507834.3_1_4:86167663-86168062:+|nuORF	35.15202426646627	0.5927656479315102	6				NaN	NaN	0	NaN	2613	2581	5191
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5197	17.788	NaN	4033	30	0	791.52	0.106				-1	 	0	56	364.18346039103375	726.3523678488675	2	364.1844787597656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2614	2581	5191
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5198	17.79	NaN	13547	30	0	1705.6	0.035	+			20967	KKEIEELQ	8	81	508.786838397057	1015.559123860914	2	509.288330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KKEIEELQ_	ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1	60.97194046774394	0.49215940876911696	6				NaN	NaN	0	NaN	2615	2581	5191
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5216	17.828	NaN	12857	30	0	4088.4	0.214	+			1569	AGGRLRSTTGA	11	74	523.7890021271587	1045.5634513211173	2	523.790771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AGGRLRSTTGA_	ENST00000498461.1_1_10:45938876-45939636:+|nuORF	54.343338949951054	0.37394860514808087	6				NaN	NaN	0	NaN	2630	2584	5215
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5217	17.831	NaN	20661	30	0	2127.2	0.106			+	28684	NLYVPLLKM	9	81	553.8176596618887	1105.6207663905773	2	553.8196411132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_NLYVPLLKM(Oxidation (M))_	REV__ENSG00000176986|ENST00000345254|SEC24C;REV__nc|ENSG00000176986|P53992-2|SEC24C	53.351449002276354	0.2690372970092375	6				NaN	NaN	0	NaN	2631	2584	5215
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5218	17.833	NaN	15115	30	0	6980.2	0.106			+	-1	SVWLCLVAV	9	67	349.5285011113725	1045.5636739343176	3	349.5295104980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SVWLC(Carbamidomethyl (C))LVAV_	REV__ENSG00000248383|ENST00000253807|PCDHAC1;REV__nc|ENSG00000248383|Q9H158-2|PCDHAC1;REV__PCDHAC1|p.E339Nfs*5|1|0.36|ENSG00000248383|chr5:140927902-140927902|C/-|frameshift_variant	42.396135135203025	0.392153681582562	6				NaN	NaN	0	NaN	2632	2584	5215
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5219	17.835	NaN	11465	30	0	1745.7	0.106			+	24500	LGIGGVFRLVE	11	80	580.3451472627676	1158.675741592335	2	580.3470458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LGIGGVFRLVE_	REV__ENSG00000106537|ENST00000262067|TSPAN13	79.71258880314673	0.15476893924564336	6				NaN	NaN	0	NaN	2633	2584	5215
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5220	17.837	NaN	12227	30	0	2039.7	0.106			+	46697	VGLFQQSQK	9	76	517.785230425133	1033.555907917066	2	517.7869262695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VGLFQQSQK_	REV__WDR17|p.T85Qfs*23|1|0.4|ENSG00000150627|chr4:176115847-176115847|A/-|frameshift_variant	59.93077597824379	0.21419174904018318	6				NaN	NaN	0	NaN	2634	2584	5215
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5221	17.839	NaN	3435.9	30	0	1054.5	0.033			+	16689	HITGAPHK	8	53	430.7393324597093	859.4641119862187	2	430.7403564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HITGAPHK_	REV__ENSG00000103494|ENST00000647211|RPGRIP1L;REV__nc|ENSG00000103494|Q68CZ1-2|RPGRIP1L	57.81127852772723	0.5234495074909924	6				NaN	NaN	0	NaN	2635	2584	5215
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5222	17.839	NaN	10630	30	0	3212.6	0.136				-1	 	0	68	334.7631051200146	667.5116573068292	2	334.7640380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2636	2584	5215
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5240	17.877	NaN	64492	30	0	7221.6	0.163	+			3718	ATAASSSSLEK	11	85	526.265857819721	1050.5171627062418	2	526.2675170898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATAASSSSLEK_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENST00000417985.1_1_X:46147855-46148119:-|nuORF;ENST00000418987.2_1_9:103493819-103494230:+|nuORF;ENST00000423183.1_1_3:12112396-12112453:+|nuORF;ENST00000450451.1_1_1:238090483-238090852:+|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2	131.08727773389177	0.0012162201639963714	6				NaN	NaN	0	NaN	2651	2587	5239
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5241	17.88	NaN	21230	30	0	3969.7	0.106			+	13665	GNSFAAAYQN	10	81	521.7329624566145	1041.4513719800289	2	521.735107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GNSFAAAYQN_	REV__SALL1|p.L1241F|1|0.19|ENSG00000103449|chr16:51137366-51137366|G/A|missense_variant	74.25504064058377	0.24255678544297835	6				NaN	NaN	0	NaN	2652	2587	5239
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5242	17.882	NaN	90246	30	0	46363	0.106			+	-1	MREWCLQGPMA	11	90	697.804115438059	1393.5936779429178	2	697.8060913085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))REWC(Carbamidomethyl (C))LQGPMA_	REV__ENST00000246194.7_1_20:32659989-32661416:+|nuORF	58.22992032128504	0.3392555181951113	6				NaN	NaN	0	NaN	2653	2587	5239
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5243	17.884	NaN	8213.5	30	0	704.33	0.106			+	19258	KAEDVEKIS	9	67	509.7729691555491	1017.5313853778982	2	509.7745056152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KAEDVEKIS_	REV__CAST|p.E474Kfs*10|1|0.39|ENSG00000153113|chr5:96754695-96754695|A/-|frameshift_variant;REV__ENSG00000153113|ENST00000675179|CAST;REV__ENST00000513666.5_1_5:96073558-96090478:+|nuORF;REV__nc|ENSG00000153113|P20810-10|CAST;REV__nc|ENSG00000153113|P20810-2|CAST;REV__nc|ENSG00000153113|P20810-3|CAST;REV__nc|ENSG00000153113|P20810-4|CAST;REV__nc|ENSG00000153113|P20810-5|CAST;REV__nc|ENSG00000153113|P20810-7|CAST;REV__nc|ENSG00000153113|P20810-8|CAST;REV__nc|ENSG00000153113|P20810-9|CAST;REV__nc|ENSG00000153113|P20810|CAST	127.46168284122857	0.016682644177004526	6				NaN	NaN	0	NaN	2654	2587	5239
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5244	17.886	NaN	9368.1	30	0	1423.9	0.106	+			32186	QSTAKKSGQK	10	72	531.799013811283	1061.5834746893659	2	531.8006591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QSTAKKSGQK_	ENSG00000135720|ENST00000258198|DYNC1LI2;nc|ENSG00000135720|O43237-2|DYNC1LI2	61.691277971877994	0.35045824941635534	6				NaN	NaN	0	NaN	2655	2587	5239
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5245	17.887	NaN	7387.4	30	0	1356.7	0.106	+			13421	GLGLEEAGPK	10	74	485.7643247753088	969.5140966174176	2	485.7661437988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GLGLEEAGPK_	ENSG00000196642|ENST00000311502|RABL6;nc|ENSG00000196642|Q3YEC7-2|RABL6	56.72105179125745	0.3956618550748046	6				NaN	NaN	0	NaN	2656	2587	5239
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5246	17.889	NaN	9437.7	30	0	3281.3	0.036			+	46156	VDSDEMWNV	9	72	547.7268005806122	1093.4390482280244	2	547.7288818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VDSDEMWNV_	REV__ENSG00000100600|ENST00000334869|LGMN;REV__ENST00000441282.1_1_13:65532685-65533108:-|nuORF;REV__ENST00000557725.5_1_14:93172722-93179177:-|nuORF;REV__nc|ENSG00000100600|Q99538-2|LGMN;REV__nc|ENSG00000100600|Q99538-3|LGMN	47.91560031466742	0.327412564698279	6				NaN	NaN	0	NaN	2657	2587	5239
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5264	17.925	NaN	149580	30	0	70669	0.185				-1	 	0	98	515.328399213957	1028.642245494714	2	515.3300170898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2672	2590	5263
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5265	17.928	NaN	31156	30	0	6909.2	0.106				-1	 	0	89	478.7906594863351	955.5667660394702	2	478.7921447753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2673	2590	5263
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5266	17.93	NaN	13135	30	0	1727.2	0.106				-1	KDSAASVIFMV	11	74	592.3050824232978	1182.5956119133955	2	592.3069458007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_KDSAASVIFM(Oxidation (M))V_	nc|ENSG00000220721|Q8NHA8|OR1F12P	54.722347961057174	0.3705654281804646	6				NaN	NaN	0	NaN	2674	2590	5263
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5267	17.932	NaN	44147	30	0	15381	0.106			+	45856	VALMGAVKLK	10	80	343.88797098786273	1028.6420835637882	3	343.8890380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VALMGAVKLK_	REV__ENSG00000125780|ENST00000381458|TGM3	51.19269402634007	0.44601001148513897	6				NaN	NaN	0	NaN	2675	2590	5263
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5268	17.934	NaN	11569	30	0	1213.2	0.106			+	20717	KGSKEDELVA	10	83	538.2842452860654	1074.5539376389306	2	538.2860717773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KGSKEDELVA_	REV__ENSG00000132554|ENST00000360863|RGS22;REV__nc|ENSG00000132554|Q8NE09-3|RGS22	136.26810882979174	0.01174908900087339	6				NaN	NaN	0	NaN	2676	2590	5263
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5269	17.936	NaN	5213.8	30	0	1879	0.106			+	-1	STFAIIMANTV	11	50	395.205774042064	1182.595492726392	3	395.2070007324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_STFAIIM(Oxidation (M))ANTV_	REV__ANO6|p.V892*|1|0.32|ENSG00000177119|chr12:45429248-45429248|G/-|frameshift_variant;REV__ENSG00000177119|ENST00000320560|ANO6;REV__nc|ENSG00000177119|Q4KMQ2-2|ANO6;REV__nc|ENSG00000177119|Q4KMQ2-3|ANO6;REV__nc|ENSG00000177119|Q4KMQ2-4|ANO6	26.063383197487333	0.7164075632144343	6				NaN	NaN	0	NaN	2677	2590	5263
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5270	17.938	NaN	4830.3	30	0	2056.1	0.033				-1	 	0	55	428.7103116678939	855.4060704025878	2	428.7113952636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2678	2590	5263
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5288	17.972	NaN	122020	30	0	21728	0.17	+			40208	STSCPVVQK	9	91	503.2536392940953	1004.4927256549906	2	503.2552795410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_STSC(Carbamidomethyl (C))PVVQK_	ENSG00000130935|ENST00000253247|NOL11;ENST00000583108.5_1_17:65733963-65734484:+|nuORF	157.32903759742106	0.0051608477690748295	6				NaN	NaN	0	NaN	2693	2593	5287
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5289	17.975	NaN	53465	30	0	17671	0.106	+			3110	ASGRSHRE	8	82	450.22577201418557	898.4369910951712	2	450.2269287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASGRSHRE_	ENST00000357360.4_1_X:153707301-153707586:-|nuORF	87.75429964447693	0.2842685068779738	6				NaN	NaN	0	NaN	2694	2593	5287
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5290	17.977	NaN	91024	30	0	20631	0.106	+			42494	TANNRRSQ	8	96	473.7443494741478	945.4741460150956	2	473.7453918457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TANNRRSQ_	ENSG00000166833|ENST00000349880|NAV2;NAV2|p.K558Sfs*35|1|0.41|ENSG00000166833|chr11:19933843-19933843|A/-|frameshift_variant;NAV2|p.V2057Wfs*16|1|0.23|ENSG00000166833|chr11:20095744-20095744|G/-|frameshift_variant;nc|ENSG00000166833|Q8IVL1-10|NAV2;nc|ENSG00000166833|Q8IVL1-11|NAV2;nc|ENSG00000166833|Q8IVL1-12|NAV2;nc|ENSG00000166833|Q8IVL1-13|NAV2;nc|ENSG00000166833|Q8IVL1-2|NAV2;nc|ENSG00000166833|Q8IVL1-4|NAV2;nc|ENSG00000166833|Q8IVL1-8|NAV2;nc|ENSG00000166833|Q8IVL1-9|NAV2;nc|ENSG00000166833|Q8IVL1|NAV2	76.7741389293348	0.3504530765139327	6				NaN	NaN	0	NaN	2695	2593	5287
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5291	17.979	NaN	7044.4	30	0	767.68	0.106				-1	 	0	84	535.7784254585863	1069.5422979839725	2	535.7802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2696	2593	5287
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5292	17.981	NaN	8425.4	30	0	919.38	0.106	+			32887	RDLEKDIR	8	75	522.7924228202558	1043.5702927073114	2	522.7993774414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RDLEKDIR_	ENSG00000138279|ENST00000372921|ANXA7;nc|ENSG00000138279|P20073|ANXA7	54.776311868738084	0.5534952410049249	6				NaN	NaN	0	NaN	2697	2593	5287
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5293	17.983	NaN	10753	30	0	2810.5	0.106	+			16982	HPRMHIDQ	8	73	517.2569178355756	NaN	0	517.2567749023438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HPRMHIDQ_	ENST00000393784.7_1_5:172377864-172378200:+|nuORF	47.657333605630114	1.7418937515398478	6				NaN	NaN	0	NaN	2698	2593	5287
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5294	17.984	NaN	5604.5	30	0	417.49	0.036			+	31561	QLNQLQLTQ	9	76	543.2999087225533	1084.5852645119064	2	543.3255004882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QLNQLQLTQ_	REV__ENSG00000185591|ENST00000327443|SP1;REV__nc|ENSG00000185591|P08047-2|SP1;REV__nc|ENSG00000185591|P08047-3|SP1	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	2699	2593	5287
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5312	18.02	NaN	8482.4	30	0	1233.6	0.214			+	-1	QRCHVLPGA	9	74	519.2712797159227	1036.5280064986453	2	519.272705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_QRC(Carbamidomethyl (C))HVLPGA_	REV__ENST00000563953.5_2_16:67262774-67262970:+|nuORF	60.29395666154354	0.21116425950210296	6				NaN	NaN	0	NaN	2714	2596	5311
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5313	18.024	NaN	9349.1	30	0	1818.9	0.106			+	13500	GLMVILLVL	9	66	324.2168798161545	NaN	0	324.2168884277344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GLMVILLVL_	REV__chr15:53523322-53540662|232|17.27|0.17|6.68|-|1|TE_info:L1PA2,L1PA2_dup4399,L1,LINE,donor,+,53540662,53546677|WDR72,None|63;REV__L1PA3_dup1321|chr2:173527290-173533317:-|1.892281258594111|0.2637255971055219|2.84|482.0|267|2|anti-sense	15.641811463095205	0.38404136392510424	6				NaN	NaN	0	NaN	2715	2596	5311
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5314	18.026	NaN	33044	30	0	6169	0.106			+	24644	LGSVRRKR	8	98	486.31466864036213	970.6147843475243	2	486.31597900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LGSVRRKR_	REV__ENST00000434634.6_1_15:85189046-85189567:-|nuORF;REV__ENST00000558521.5_3_15:85189295-85189567:-|nuORF	53.351449002276354	0.5676011784961348	6				NaN	NaN	0	NaN	2716	2596	5311
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5315	18.028	NaN	4919.6	30	0	805.5	0.106	+			8384	EAMTLFLE	8	61	477.2367179972558	952.4588830613117	2	477.238037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EAMTLFLE_	ENSG00000124571|ENST00000265351|XPO5	38.80614096846853	0.6637206697844082	6				NaN	NaN	0	NaN	2717	2596	5311
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5316	18.03	NaN	4140.6	30	0	458.41	0.106			+	-1	FFIDLMKP	8	65	513.7710665453731	NaN	0	513.7705078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_FFIDLM(Oxidation (M))KP_	REV__ENST00000358127.8_1_9:36833483-36833678:-|nuORF	38.80614096846853	1.7418937515398478	6				NaN	NaN	0	NaN	2718	2596	5311
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5317	18.031	NaN	4767.2	30	0	561.24	0.036			+	30749	QDLVDSFQR	9	70	554.275321335881	1106.536089738562	2	554.2774047851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QDLVDSFQR_	REV__DNAH5|p.F4486Lfs*7|2|0.23|ENSG00000039139|chr5:13701317-13701317|A/-|frameshift_variant;REV__DNAH5|p.I4068*|1|0.07|ENSG00000039139|chr5:13721077-13721077|T/-|frameshift_variant;REV__ENSG00000039139|ENST00000265104|DNAH5	39.252832667884924	0.4290233611298554	6				NaN	NaN	0	NaN	2719	2596	5311
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5318	18.032	NaN	10715	30	0	1179.6	0.141	+			48907	VVDNGSGMCK	10	74	533.7348473587456	1065.455141784291	2	533.7368774414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_VVDNGSGMC(Carbamidomethyl (C))K_	ACTBL2|p.R29Gfs*7|1|0.37|ENSG00000169067|chr5:57482623-57482623|G/-|frameshift_variant;ENSG00000075624|ENST00000646664|ACTB;ENSG00000169067|ENST00000423391|ACTBL2;ENST00000418351.1_1_15:44282253-44282364:-|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000477812.1_1_7:5569027-5569288:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF	66.96192283764107	0.30252237217063654	6				NaN	NaN	0	NaN	2720	2596	5311
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5336	18.07	NaN	37256	30	0	6393.3	0.161	+			4116	ATDYGTIKK	9	77	498.7698858539418	995.5252187746836	2	498.7715759277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATDYGTIKK_	ENSG00000112902|ENST00000382496|SEMA5A	164.45504665044191	0.003713414289755139	6				NaN	NaN	0	NaN	2735	2599	5335
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5337	18.072	NaN	60837	30	0	13523	0.092				-1	 	0	66	455.18715580875414	908.3597586843083	2	455.1883239746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2736	2599	5335
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5338	18.074	NaN	40424	30	0	8093.8	0.106	+			21147	KKTGVQWP	8	88	472.2718541546569	942.5291553761139	2	472.2730712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KKTGVQWP_	ENST00000589829.5_1_18:11905221-11905871:-|nuORF	65.80317337860623	0.44433089765398776	6				NaN	NaN	0	NaN	2737	2599	5335
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5339	18.076	NaN	28687	30	0	3170.3	0.106	+			34372	RTQNVLGEK	9	97	522.7924228202558	1043.5702927073114	2	522.7938232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RTQNVLGEK_	ENSG00000149273|ENST00000531188|RPS3;ENST00000407940.1_1_6:7339375-7339741:-|nuORF;ENST00000529173.5_1_11:75110591-75112804:+|nuORF;nc|ENSG00000149273|P23396-2|RPS3	156.16072019525166	0.005433163824165674	6				NaN	NaN	0	NaN	2738	2599	5335
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5340	18.078	NaN	9097.6	30	0	1829.5	0.106				-1	DLFKREHMMSC	11	69	706.8098706997281	1411.605188466256	2	706.811279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_DLFKREHM(Oxidation (M))MSC_	ENSG00000204634|ENST00000409318|TBC1D8;nc|ENSG00000204634|O95759-2|TBC1D8;nc|ENSG00000204634|O95759|TBC1D8	16.006774744331256	0.795539314609425	6				NaN	NaN	0	NaN	2739	2599	5335
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5341	18.08	NaN	17245	30	0	1589.3	0.106	+			44581	TTCEQIVRK	9	90	567.7981667703499	1133.5817806074997	2	567.8009033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_TTC(Carbamidomethyl (C))EQIVRK_	ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1;nc|ENSG00000125107|A5YKK6-4|CNOT1	154.1183686248401	0.005909203230691971	6				NaN	NaN	0	NaN	2740	2599	5335
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5342	18.081	NaN	10204	30	0	1236.6	0.034	+			17943	IGNLSSPVSP	10	78	485.7643247753088	969.5140966174176	2	486.2671203613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IGNLSSPVSP_	ENSG00000196531|ENST00000454682|NACA	40.77816245573522	0.5419747034533848	6				NaN	NaN	0	NaN	2741	2599	5335
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5360	18.119	NaN	314420	30	0	106540	0.071				-1	SVSKSMLFL	9	81	343.1880580865419	1026.5423448598258	3	343.1894226074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_SVSKSM(Oxidation (M))LFL_	HERV35I-int_dup77|chr3:106541134-106546233:+|1.3860853119714591|0.1976016791882729|2.81|468.0|229|1|anti-sense	39.252832667884924	0.4290233611298554	6				NaN	NaN	0	NaN	2756	2602	5359
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5361	18.12	NaN	172420	30	0	27078	0.106				-1	 	0	104	514.2785298752326	1026.5425068172651	2	514.2801513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2757	2602	5359
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5362	18.122	NaN	50252	30	0	3611	0.106				-1	 	0	92	540.7919023232522	1079.5692517133043	2	540.7938232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2758	2602	5359
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5363	18.124	NaN	8042.2	30	0	733.9	0.106				-1	 	0	71	435.2442236181814	868.4738943031629	2	435.2453918457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2759	2602	5359
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5364	18.126	NaN	4046.3	30	0	865.93	0.106				-1	ESCLHLVLL	9	45	361.8671564660581	1082.5796399983742	3	361.86834716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_ESC(Carbamidomethyl (C))LHLVLL_	ENST00000380888.4_1_20:29521812-29522016:-|nuORF;ENST00000607809.5_1_12:54472874-54474119:-|nuORF	27.882242232435846	0.5426732730940306	6				NaN	NaN	0	NaN	2760	2602	5359
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5365	18.128	NaN	6485.6	30	0	544.44	0.106	+			46692	VGKPTTIYM	9	72	337.18473338531453	1008.5323707561436	3	337.1857604980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VGKPTTIYM_	DLG2|p.V595Sfs*16|1|0.37|ENSG00000150672|chr11:83541701-83541701|C/-|frameshift_variant;ENSG00000150672|ENST00000376104|DLG2;ENST00000529111.5_1_11:83344252-84634162:-|nuORF;nc|ENSG00000150672|Q15700-3|DLG2;nc|ENSG00000150672|Q15700-4|DLG2;nc|ENSG00000150672|Q15700|DLG2	47.91560031466742	0.327412564698279	6				NaN	NaN	0	NaN	2761	2602	5359
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5366	18.13	NaN	8019.8	30	0	1653.8	0.106			+	-1	KLTSINESC	9	61	526.25789088157	1050.50122882994	2	526.2596435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_KLTSINESC(Carbamidomethyl (C))_	REV__ENSG00000103051|ENST00000323786|COG4;REV__ENST00000564315.1_1_16:70516583-70530267:-|nuORF;REV__nc|ENSG00000103051|Q9H9E3-3|COG4;REV__nc|ENSG00000103051|Q9H9E3|COG4;REV__ST3GAL2-COG4|1|fusion;REV__ST3GAL2-COG4|2|fusion	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	2762	2602	5359
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5367	18.131	NaN	52349	30	0	15606	0.035	+			43374	TGETTVFSVG	10	100	499.24619600904833	996.4778390848967	2	499.2476806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_TGETTVFSVG_	ENSG00000164620|ENST00000297164|RELL2	64.20726635412375	0.3275756395432415	6				NaN	NaN	0	NaN	2763	2602	5359
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5385	18.169	NaN	157010	30	0	28883	0.141	+			5860	AVIQGQAVRK	10	87	535.3257740095254	1068.6369950858507	2	535.3274536132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVIQGQAVRK_	ENSG00000099812|ENST00000215582|MISP	143.37361013837676	0.009854612225601756	6				NaN	NaN	0	NaN	2778	2605	5384
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5386	18.171	NaN	24382	30	0	3933.2	0.106	+			1864	AILDKTTNK	9	85	502.2908938442294	1002.5672347552588	2	502.2927551269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AILDKTTNK_	ENSG00000076067|ENST00000262031|RBMS2;ENSG00000153250|ENST00000348849|RBMS1;nc|ENSG00000153250|P29558-2|RBMS1	167.93327368760816	0.003119697835950078	6				NaN	NaN	0	NaN	2779	2605	5384
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5387	18.174	NaN	14720	30	0	1421.6	0.106	+			14285	GSVLVMLLQ	9	79	488.2812683847557	974.5479838363115	2	488.2825622558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_GSVLVM(Oxidation (M))LLQ_	ENSG00000158435|ENST00000289382|CNOT11	58.78195531508484	0.22376836668196862	6				NaN	NaN	0	NaN	2780	2605	5384
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5388	18.175	NaN	22999	30	0	3683.9	0.106				-1	CAKMRSSK	8	71	463.7311586215938	925.4477643099876	2	463.7323303222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_CAKM(Oxidation (M))RSSK_	ENSG00000162434|ENST00000342505|JAK1;JAK1|p.K142Rfs*26|1|0.07|ENSG00000162434|chr1:64873428-64873428|T/-|frameshift_variant;JAK1|p.K860Nfs*16|3|0.29|ENSG00000162434|chr1:64841314-64841314|T/-|frameshift_variant;JAK1|p.L346Tfs*4|1|0.28|ENSG00000162434|chr1:64864927-64864928|-/T|frameshift_variant;JAK1|p.N339Ifs*3|2|0.36|ENSG00000162434|chr1:64864947-64864947|T/-|frameshift_variant	58.78195531508484	0.5138399468736706	6				NaN	NaN	0	NaN	2781	2605	5384
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5389	18.177	NaN	198070	30	0	49146	0.106			+	48475	VTLTEMVLL	9	103	340.2003770731006	1017.5793018195018	3	340.20123291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTLTEMVLL_	REV__ENSG00000163625|ENST00000295888|WDFY3;REV__ENST00000426414.6_1_4:85730999-85781744:-|nuORF;REV__nc|ENSG00000163625|Q8IZQ1-2|WDFY3;REV__WDFY3|p.L1060Cfs*41|1|0.4|ENSG00000163625|chr4:84794968-84794968|A/-|frameshift_variant;REV__WDFY3|p.L1842Yfs*10|1|0.19|ENSG00000163625|chr4:84755300-84755300|A/-|frameshift_variant;REV__WDFY3|p.N1207Tfs*16|1|0.37|ENSG00000163625|chr4:84789775-84789775|T/-|frameshift_variant	25.450171626174864	0.5654022654467333	6				NaN	NaN	0	NaN	2782	2605	5384
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5390	18.179	NaN	19515	30	0	4807.4	0.106				-1	 	0	73	456.7653730156787	911.5161930981574	2	456.7664794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2783	2605	5384
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5391	18.181	NaN	73432	30	0	7573.6	0.035				-1	 	0	110	509.79689200840113	1017.5792310836023	2	509.7983093261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2784	2605	5384
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5410	18.216	NaN	547620	30	0	164080	0.13	+			4080	ATDKSFVEK	9	94	342.1807486127331	1023.5204164383994	3	342.1820373535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATDKSFVEK_	ENSG00000100345|ENST00000216181|MYH9;ENSG00000105357|ENST00000642316|MYH14;ENSG00000133392|ENST00000300036|MYH11;MYH14|p.L1950Sfs*14|1|0.34|ENSG00000105357|chr19:50309646-50309646|C/-|frameshift_variant;MYH14|p.M997*|1|0.19|ENSG00000105357|chr19:50271483-50271483|A/-|frameshift_variant;MYH14|p.R929Gfs*44|1|0.38|ENSG00000105357|chr19:50268237-50268237|G/-|frameshift_variant;MYH9|p.I784*|1|0.07|ENSG00000100345|chr22:36304036-36304036|G/-|frameshift_variant;nc|ENSG00000100345|P35579-2|MYH9;nc|ENSG00000105357|Q7Z406-4|MYH14;nc|ENSG00000105357|Q7Z406-5|MYH14;nc|ENSG00000105357|Q7Z406-6|MYH14;nc|ENSG00000105357|Q7Z406|MYH14;nc|ENSG00000133392|P35749-2|MYH11;nc|ENSG00000133392|P35749-3|MYH11;nc|ENSG00000133392|P35749-4|MYH11	59.93077597824379	0.21419174904018318	6				NaN	NaN	0	NaN	2800	2608	5409
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5411	18.218	NaN	38090	30	0	4183	0.106	+			31712	QNRRVKHK	8	86	533.3229982135698	1064.6314434939395	2	533.3248291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QNRRVKHK_	ENSG00000169840|ENST00000302945|GSX1;ENSG00000180613|ENST00000326902|GSX2;ENST00000507839.1_1_4:54965775-54968086:+|nuORF	82.30502934623384	0.30436709589983096	6				NaN	NaN	0	NaN	2801	2608	5409
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5412	18.22	NaN	37000	30	0	13136	0.106				-1	 	0	99	336.17737966211405	1005.5103095865422	3	336.1784362792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2802	2608	5409
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5413	18.222	NaN	24162	30	0	14631	0.106	+			24505	LGITLVGHQK	10	57	355.8853479203962	NaN	0	355.88543701171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LGITLVGHQK_	ENSG00000135333|ENST00000369303|EPHA7;nc|ENSG00000135333|Q15375-2|EPHA7;nc|ENSG00000135333|Q15375-4|EPHA7	51.19269402634007	0.2980620950593832	6				NaN	NaN	0	NaN	2803	2608	5409
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5414	18.224	NaN	23039	30	0	3615.1	0.106				-1	AVEPSSSE	8	77	424.18721974941633	846.3598865656327	2	424.1883850097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))AVEPSSSE_	nc|ENSG00000196353|Q96A23-2|CPNE4	44.53106598305862	0.628196326904373	6				NaN	NaN	0	NaN	2804	2608	5409
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5415	18.226	NaN	17582	30	0	7789.1	0.106	+			32297	QTNRRKKR	8	76	543.8336324028066	1085.6527118724132	2	543.835693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QTNRRKKR_	ENSG00000092969|ENST00000366930|TGFB2;ENST00000479322.1_1_1:218607587-218614701:+|nuORF;nc|ENSG00000092969|P61812-2|TGFB2	30.317721548370564	0.7252424349988982	6				NaN	NaN	0	NaN	2805	2608	5409
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5416	18.227	NaN	24997	30	0	5134.8	0.106				-1	 	0	82	426.72562957189547	851.436706210591	2	426.7266540527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2806	2608	5409
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5417	18.229	NaN	16958	30	0	8484	0.037			+	19454	KARKQQARK	9	86	371.9033688426181	1112.6882771280543	3	371.90460205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_KARKQQARK_	REV__ENST00000371160.5_1_X:123159712-123164898:+|nuORF	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	2807	2608	5409
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5435	18.264	NaN	21738	30	0	3848.6	0.214				-1	 	0	75	434.2365784422239	866.4586039512478	2	434.2376708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2822	2611	5434
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5436	18.268	NaN	20057	30	0	5200.9	0.106	+			35608	SCCPVGCAK	9	68	491.1992201393003	980.3838873454006	2	491.2010498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_SCC(Carbamidomethyl (C))PVGC(Carbamidomethyl (C))AK_	CON__P67983;ENSG00000125144|ENST00000379811|MT1G;ENSG00000125148|ENST00000245185|MT2A;ENSG00000169688|ENST00000334346|MT1B;ENSG00000187193|ENST00000394485|MT1X;ENSG00000205364|ENST00000379818|MT1M;ENST00000330439.6_1_16:56660742-56660880:+|nuORF;ENST00000562017.1_1_16:56643131-56643263:+|nuORF;ENST00000563985.1_1_16:56642884-56643263:+|nuORF;ENST00000567300.1_1_16:56642646-56643263:+|nuORF;nc|ENSG00000125144|P13640-2|MT1G;nc|ENSG00000169715|P04732|MT1E	125.81401957644128	0.01768009863045738	6				NaN	NaN	0	NaN	2823	2611	5434
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5437	18.27	NaN	14532	30	0	1929.7	0.106	+			2677	AQNEPLTQK	9	74	514.772668143267	NaN	0	514.7725219726562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AQNEPLTQK_	ENSG00000156304|ENST00000286835|SCAF4;ENST00000467731.1_1_21:33057290-33073360:-|nuORF;nc|ENSG00000156304|O95104-2|SCAF4;nc|ENSG00000156304|O95104-3|SCAF4;SCAF4|p.E653Qfs*24|1|0.4|ENSG00000156304|chr21:31688393-31688394|-/TG|frameshift_variant;SCAF4|p.V1113Cfs*7|1|0.22|ENSG00000156304|chr21:31671506-31671506|C/-|frameshift_variant	150.36159442982594	0.0026033977239465623	6				NaN	NaN	0	NaN	2824	2611	5434
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5438	18.272	NaN	16145	30	0	5058.5	0.106				-1	SLGVMLYTM	9	84	515.7515456766772	NaN	0	515.7513427734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_SLGVMLYTM(Oxidation (M))_	ENSG00000071575|ENST00000155926|TRIB2	55.50420428727701	0.16876052142120426	6				NaN	NaN	0	NaN	2825	2611	5434
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5439	18.273	NaN	18507	30	0	4546.9	0.106			+	11301	FKPTNKQPN	9	78	537.2907815238055	1072.567010114411	2	537.2926025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FKPTNKQPN_	REV__ENSG00000109576|ENST00000337664|AADAT;REV__nc|ENSG00000109576|Q8N5Z0-2|AADAT	83.6470233535746	0.08277643980271215	6				NaN	NaN	0	NaN	2826	2611	5434
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5440	18.275	NaN	11439	30	0	2372.9	0.035				-1	 	0	71	503.78608252209165	1005.5576121109833	2	503.7874755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2827	2611	5434
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5441	18.276	NaN	14416	30	0	1542.7	0.14	+			3286	ASLPVRNAK	9	82	478.28759843340316	NaN	0	478.28765869140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASLPVRNAK_	nc|ENSG00000145247|Q56VL3-2|OCIAD2	53.08895987439943	0.18540527177656715	6				NaN	NaN	0	NaN	2828	2611	5434
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5459	18.315	NaN	135460	30	0	21894	0.108				-1	VVKVMPQDLV	10	68	381.88620686463366	1142.636791194101	3	381.88751220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_VVKVM(Oxidation (M))PQDLV_	ENSG00000196263|ENST00000308031|ZNF471;nc|ENSG00000196263|Q9BX82-2|ZNF471	36.446750945000026	0.5818864909973037	6				NaN	NaN	0	NaN	2843	2614	5458
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5460	18.317	NaN	54661	30	0	12631	0.106			+	21236	KLIKLDFCK	9	63	369.8925897910377	NaN	0	369.892578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KLIKLDFCK_	REV__ENSG00000086827|ENST00000200135|ZW10;REV__nc|ENSG00000086827|O43264-2|ZW10	49.536043120802724	0.20989033510253738	6				NaN	NaN	0	NaN	2844	2614	5458
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5461	18.318	NaN	74896	30	0	23595	0.106			+	37501	SLLCLVLSLP	10	86	353.21586187326443	1056.6257562199933	3	353.21697998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLLCLVLSLP_	REV__SULF2|p.P4L|1|0.44|ENSG00000196562|chr20:47757353-47757353|G/A|missense_variant	32.81241826257853	0.6118718159329168	6				NaN	NaN	0	NaN	2845	2614	5458
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5462	18.321	NaN	22662	30	0	6512.1	0.07			+	21235	KLIKLDFCK	9	75	554.3336873344261	1106.6528217356522	2	554.3356323242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KLIKLDFCK_	REV__ENSG00000086827|ENST00000200135|ZW10;REV__nc|ENSG00000086827|O43264-2|ZW10	54.722347961057174	0.257609425301511	6				NaN	NaN	0	NaN	2846	2614	5458
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5463	18.322	NaN	213680	30	0	24109	0.106			+	31122	QGAGASKSKSQ	11	101	524.7730557327286	1047.5315585322571	2	524.7750244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QGAGASKSKSQ_	REV__ENSG00000168137|ENST00000402198|SETD5;REV__ENST00000413704.5_1_3:9487316-9517772:+|nuORF;REV__ENST00000466242.5_1_3:9484907-9517772:+|nuORF;REV__ENST00000486465.5_1_3:9512364-9516346:+|nuORF;REV__ENST00000492939.5_1_3:9514925-9516846:+|nuORF;REV__nc|ENSG00000168137|Q9C0A6-2|SETD5;REV__nc|ENSG00000168137|Q9C0A6-3|SETD5;REV__SETD5|p.K1129Nfs*15|1|0.41|ENSG00000168137|chr3:9473422-9473422|A/-|frameshift_variant;REV__SETD5|p.T1366Kfs*4|1|0.35|ENSG00000168137|chr3:9475859-9475859|C/-|frameshift_variant	91.26522074875469	0.0935951923676557	6				NaN	NaN	0	NaN	2847	2614	5458
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5464	18.324	NaN	55034	30	0	10316	0.106	+			8446	EARKRKNR	8	100	529.3203638792452	1056.6261748252903	2	529.3222045898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EARKRKNR_	ENSG00000136888|ENST00000374050|ATP6V1G1	101.21157088398209	0.2500103534009131	6				NaN	NaN	0	NaN	2848	2614	5458
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5465	18.325	NaN	21889	30	0	3129.4	0.106	+			27661	MPSLKIPKVD	10	81	572.3260634566723	1142.6375739801445	2	572.3280639648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_M(Oxidation (M))PSLKIPKVD_	AHNAK2|p.M2081I|1|0.06|ENSG00000185567|chr14:104949208-104949208|C/T|missense_variant	42.86426827375447	0.522752283233888	6				NaN	NaN	0	NaN	2849	2614	5458
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5466	18.327	NaN	152520	30	0	55500	0.036			+	15127	GTRMPSMIR	9	115	350.1844726888645	1047.5315886667936	3	350.1856689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_GTRMPSMIR_	REV__ENSG00000118058|ENST00000534358|KMT2A;REV__KMT2A|p.L3197Wfs*15|1|0.31|ENSG00000118058|chr11:118505488-118505488|T/-|frameshift_variant;REV__nc|ENSG00000118058|Q03164-2|KMT2A;REV__nc|ENSG00000118058|Q03164|KMT2A	44.116797842482775	0.37197099687881774	6				NaN	NaN	0	NaN	2850	2614	5458
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5484	18.364	NaN	83550	30	0	23028	0.214	+			24049	LEGSNAYYC	9	103	538.7215878898538	1075.4286228465076	2	538.7234497070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_LEGSNAYYC(Carbamidomethyl (C))_	ENSG00000162402|ENST00000294383|USP24	73.97473282117947	0.12360187025703594	6				NaN	NaN	0	NaN	2865	2617	5483
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5485	18.367	NaN	40223	30	0	11811	0.106			+	12568	GEGPWPTQR	9	98	514.2515008703913	1026.4884488075825	2	514.253173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEGPWPTQR_	REV__ENST00000576916.5_2_16:3534964-3535735:+|nuORF	51.19269402634007	0.2889735674168909	6				NaN	NaN	0	NaN	2866	2617	5483
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5486	18.369	NaN	21201	30	0	5335.3	0.106				-1	 	0	65	464.1922448824342	926.3699368316684	2	464.1934814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2867	2617	5483
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5487	18.371	NaN	8361.6	30	0	937.09	0.106				-1	 	0	70	377.7308829060873	753.4472128789746	2	377.7320251464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2868	2617	5483
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5488	18.373	NaN	26991	30	0	7623.9	0.106	+			46116	VDGYPHPRS	9	104	343.1699997981834	1026.4881699947503	3	343.1711120605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VDGYPHPRS_	DSCAML1|p.P778Hfs*36|1|0.26|ENSG00000177103|chr11:117504953-117504953|G/-|frameshift_variant	37.15910966729921	0.4535818937225704	6				NaN	NaN	0	NaN	2869	2617	5483
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5489	18.375	NaN	9927.3	30	0	4147.8	0.036	+			10031	ERYMKELE	8	74	549.2692501259162	1096.5239473186323	2	549.2714233398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ERYMKELE_	ENSG00000140382|ENST00000336216|HMG20A;HMG20A|p.K160N|1|0.29|ENSG00000140382|chr15:77470939-77470939|G/T|missense_variant	27.882242232435846	0.7440473649773525	6				NaN	NaN	0	NaN	2870	2617	5483
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5490	18.375	NaN	3907.7	30	0	747.54	0.14				-1	 	0	57	480.78873211207576	959.5629112909515	2	480.7897033691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2871	2617	5483
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5508	18.415	NaN	767860	30	0	226320	0.103				-1	 	0	84	474.2598537924154	946.5051546516308	2	474.26123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2886	2620	5507
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5509	18.416	NaN	109330	30	0	8678.1	0.106			+	5063	ATSKHLSGARS	11	102	557.8020333638328	1113.5895137944656	2	557.803955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATSKHLSGARS_	REV__ENSG00000109265|ENST00000682029|CRACD	76.16968421966216	0.18430501143391895	6				NaN	NaN	0	NaN	2887	2620	5507
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5510	18.418	NaN	43922	30	0	7334.1	0.106	+			13783	GQGVNNVPK	9	89	456.74716674949616	911.4797805657923	2	456.7481689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GQGVNNVPK_	ENSG00000179119|ENST00000336349|SPTY2D1;ENST00000536336.5_1_11:18633859-18655855:-|nuORF;nc|ENSG00000179119|Q68D10-2|SPTY2D1;nc|ENSG00000179119|Q68D10-3|SPTY2D1;SPTY2D1|p.P485Rfs*12|1|0.3|ENSG00000179119|chr11:18614820-18614820|G/-|frameshift_variant	104.74654710444128	0.034358562718640136	6				NaN	NaN	0	NaN	2888	2620	5507
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5511	18.42	NaN	24114	30	0	5695.7	0.106	+			9501	EKTQRRRL	8	84	543.8278749246642	1085.6411969161284	2	543.829833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EKTQRRRL_	ENSG00000146833|ENST00000349062|TRIM4;nc|ENSG00000146833|Q9C037-3|TRIM4;nc|ENSG00000146833|Q9C037|TRIM4;REV__FMNL3|p.A979T|1|0.39|ENSG00000161791|chr12:49646946-49646946|C/T|missense_variant;TRIM4|p.N373Tfs*57|1|0.3|ENSG00000146833|chr7:99892548-99892548|T/-|frameshift_variant	58.78195531508484	0.5138399468736706	6				NaN	NaN	0	NaN	2889	2620	5507
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5512	18.422	NaN	20465	30	0	8051.1	0.106			+	-1	KSKEVEGYM	9	81	362.84459319393574	NaN	0	362.888671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_KSKEVEGYM(Oxidation (M))_	REV__ENST00000393913.7_1_2:75719959-75720214:-|nuORF	45.97224482568171	0.23445038899310136	6				NaN	NaN	0	NaN	2890	2620	5507
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5513	18.424	NaN	25705	30	0	6844.4	0.106				-1	 	0	76	486.23898851304307	970.4634240928862	2	486.2402038574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2891	2620	5507
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5514	18.426	NaN	11922	30	0	1411.3	0.033				-1	 	0	58	442.7805462152288	883.5465394972576	2	442.781494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2892	2620	5507
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5515	18.426	NaN	3875.1	30	0	543.75	0.142			+	-1	LTRCMPLLI	9	46	359.2045483986976	NaN	0	359.20452880859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Oxidation (M)	_LTRCM(Oxidation (M))PLLI_	REV__ENSG00000086991|ENST00000263317|NOX4;REV__ENST00000525278.1_1_11:89177257-89224483:-|nuORF;REV__nc|ENSG00000086991|Q9NPH5-5|NOX4;REV__nc|ENSG00000086991|Q9NPH5-6|NOX4;REV__nc|ENSG00000086991|Q9NPH5-8|NOX4;REV__nc|ENSG00000086991|Q9NPH5-9|NOX4;REV__NOX4|p.S69I|1|0.33|ENSG00000086991|chr11:89451843-89451843|C/A|missense_variant	40.77816245573522	0.2702456086868081	6				NaN	NaN	0	NaN	2893	2620	5507
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5533	18.465	NaN	52446	30	0	12565	0.214				-1	 	0	79	446.2287382954765	890.442923657753	2	446.22991943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2908	2623	5532
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5534	18.468	NaN	17500	30	0	5145.7	0.106				-1	 	0	82	501.31972557042036	1000.6248982076407	2	501.3212585449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2909	2623	5532
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5535	18.47	NaN	22584	30	0	10375	0.106	+			5984	AVLSITAKAK	10	73	334.5499282236602	NaN	0	334.5499572753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVLSITAKAK_	ENSG00000173692|ENST00000308696|PSMD1;nc|ENSG00000173692|Q99460-2|PSMD1;PSMD1|p.K849Rfs*44|1|0.38|ENSG00000173692|chr2:231165258-231165258|A/-|frameshift_variant	35.61828744233558	0.3832230071539346	6				NaN	NaN	0	NaN	2910	2623	5532
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5536	18.472	NaN	11226	30	0	2582.2	0.106			+	32001	QRHRQALAV	9	68	360.21219081988494	1077.6147430598548	3	360.2132873535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QRHRQALAV_	REV__nc|ENSG00000261359|I3L0S3|PYCARD-AS1	26.69291269510374	0.5537881896960711	6				NaN	NaN	0	NaN	2911	2623	5532
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5537	18.474	NaN	45359	30	0	11724	0.106				-1	 	0	60	376.1889779789981	750.3634030247962	2	376.1902160644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2912	2623	5532
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5538	18.476	NaN	5350.2	30	0	3654	0.038			+	-1	EMDKLMMNK	9	43	396.5084656004124	1186.5035674014373	3	396.5097351074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	3 Oxidation (M)	_EM(Oxidation (M))DKLM(Oxidation (M))M(Oxidation (M))NK_	REV__ENSG00000106819|ENST00000375544|ASPN	24.519189625965996	0.574102787014149	6				NaN	NaN	0	NaN	2913	2623	5532
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5539	18.477	NaN	5693.6	30	0	510.5	0.141				-1	 	0	67	542.7836267810424	1083.5527006288846	2	542.7854614257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2914	2623	5532
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5557	18.516	NaN	162980	30	0	38764	0.157				-1	 	0	86	441.262313665468	880.510074397736	2	441.26348876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2929	2626	5556
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5558	18.519	NaN	35394	30	0	22622	0.106			+	22888	KVLSFICI	8	74	461.77553532981176	921.5365177264235	2	461.7767333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVLSFICI_	REV__ENST00000541507.1_12:9094188-9094401:-|nuORF	74.51659920185547	0.36926395944126233	6				NaN	NaN	0	NaN	2930	2626	5556
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5559	18.521	NaN	20185	30	0	2649.1	0.106	+			1273	AESGRGQVM	9	76	467.7243900475016	933.4342271618032	2	467.72381591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AESGRGQVM_	ENSG00000008517|ENST00000525643|IL32;nc|ENSG00000008517|P24001-3|IL32;nc|ENSG00000008517|P24001-4|IL32;nc|ENSG00000008517|P24001|IL32	74.25504064058377	0.12238981753128622	6				NaN	NaN	0	NaN	2931	2626	5556
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5560	18.523	NaN	12501	30	0	1104.2	0.106	+			20250	KEMFIMVQE	9	84	577.7828955517414	1153.5512381702827	2	577.7849731445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEMFIMVQE_	ENSG00000012817|ENST00000317961|KDM5D;ENSG00000126012|ENST00000375401|KDM5C;ENST00000465402.1_1_X:53230656-53239709:-|nuORF;ENST00000469599.6_1_Y:21877495-21878275:-|nuORF;ENST00000481369.1_1_X:53230656-53231176:-|nuORF;ENST00000492117.1_1_Y:21877982-21883284:-|nuORF;ENST00000497100.5_1_X:53227940-53240837:-|nuORF;KDM5C|p.L1399Wfs*5|2|0.16|ENSG00000126012|chrX:53193560-53193560|G/-|frameshift_variant;nc|ENSG00000012817|Q9BY66-2|KDM5D;nc|ENSG00000012817|Q9BY66-3|KDM5D;nc|ENSG00000126012|P41229-2|KDM5C;nc|ENSG00000126012|P41229-3|KDM5C;nc|ENSG00000126012|P41229-4|KDM5C;nc|ENSG00000126012|P41229-5|KDM5C	52.936696900407355	0.27249468807391813	6				NaN	NaN	0	NaN	2932	2626	5556
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5561	18.524	NaN	27336	30	0	6477.9	0.106				-1	 	0	69	414.73660184705994	827.4586507609199	2	414.7378234863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2933	2626	5556
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5562	18.526	NaN	17502	30	0	13904	0.106				-1	 	0	53	424.22835362647385	846.4421543197477	2	424.2294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2934	2626	5556
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5563	18.528	NaN	11484	30	0	1214	0.036				-1	EVLITMQIV	9	84	531.3000229056663	1060.5854928781325	2	531.3018188476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_EVLITM(Oxidation (M))QIV_	ENSG00000164961|ENST00000318410|WASHC5	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	2935	2626	5556
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5581	18.565	NaN	124590	30	0	23508	0.214				-1	 	0	106	502.27312736889985	1002.5317018045997	2	502.2742919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2950	2629	5580
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5582	18.569	NaN	18351	30	0	2902.4	0.106	+			40943	SVFSQSGNSR	10	80	534.7574432236348	NaN	0	534.7571411132812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVFSQSGNSR_	CDC27|p.I404Sfs*15|1|0.44|ENSG00000004897|chr17:47142397-47142397|T/-|frameshift_variant;CDC27|p.P360Lfs*7|1|0.33|ENSG00000004897|chr17:47143976-47143977|-/AATTTAAA|frameshift_variant;ENSG00000004897|ENST00000066544|CDC27;ENST00000525495.6_2_17:45219385-45266538:-|nuORF;ENST00000533415.5_1_17:45198303-45266605:-|nuORF;nc|ENSG00000004897|P30260-2|CDC27	66.96192283764107	0.17742606645642828	6				NaN	NaN	0	NaN	2951	2629	5580
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5583	18.571	NaN	8878.2	30	0	2133.7	0.106				-1	 	0	79	488.80378902443977	975.5930251156796	2	488.8052062988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2952	2629	5580
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5584	18.573	NaN	7117.6	30	0	1494.9	0.106	+			14399	GTALVGSQK	9	56	430.74517941680426	NaN	0	430.7452392578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTALVGSQK_	ENSG00000137309|ENST00000311487|HMGA1;ENST00000430198.2_1_4:73964637-73964859:+|nuORF;nc|ENSG00000137309|P17096-3|HMGA1	68.84614121027924	0.11159004992091766	6				NaN	NaN	0	NaN	2953	2629	5580
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5585	18.575	NaN	3171.7	30	0	317.99	0.106				-1	 	0	66	477.2912013991469	952.5678498650939	2	477.2922058105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2954	2629	5580
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5586	18.577	NaN	11314	30	0	913.4	0.034			+	50128	WIADLVRS	8	89	480.26902609823276	958.5234992632655	2	480.2702941894531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_WIADLVRS_	REV__ENSG00000196943|ENST00000267425|NOP9	66.42927471994793	0.4381325844043345	6				NaN	NaN	0	NaN	2955	2629	5580
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5587	18.577	NaN	16296	30	0	3966.5	0.144			+	-1	VLEKLAVFLMV	11	81	426.58933061576545	1276.7461624474963	3	426.5903625488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_VLEKLAVFLM(Oxidation (M))V_	REV__ENSG00000168116|ENST00000370733|KIAA1586;REV__KIAA1586|p.S537Qfs*20|1|0.31|ENSG00000168116|chr6:57054105-57054105|T/-|frameshift_variant;REV__nc|ENSG00000168116|Q9HCI6-2|KIAA1586	50.033510581677724	0.4206539900604183	6				NaN	NaN	0	NaN	2956	2629	5580
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5605	18.614	NaN	66956	30	0	13201	0.189	+			34397	RTSGRSNINVG	11	90	580.8103896694398	1159.6062264056795	2	580.812255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTSGRSNINVG_	ENSG00000165694|ENST00000298542|FRMD7;nc|ENSG00000165694|Q6ZUT3-2|FRMD7	53.01288593483079	0.3858247291064905	6				NaN	NaN	0	NaN	2971	2632	5604
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5606	18.618	NaN	31900	30	0	11950	0.106			+	39659	STIFQHPSSI	10	80	558.7875533438807	1115.5605537545614	2	558.7898559570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STIFQHPSSI_	REV__ENSG00000181143|ENST00000397910|MUC16;REV__MUC16|p.F10843Sfs*11|1|0.22|ENSG00000181143|chr19:8938427-8938427|A/-|frameshift_variant;REV__MUC16|p.K6604Rfs*26|1|0.27|ENSG00000181143|chr19:8956959-8956959|T/-|frameshift_variant;REV__MUC16|p.L8270Wfs*63|1|0.04|ENSG00000181143|chr19:8951962-8951963|-/ACCA|frameshift_variant;REV__MUC16|p.N9430Tfs*13|1|0.14|ENSG00000181143|chr19:8948481-8948481|T/-|frameshift_variant;REV__MUC16|p.S4774Ffs*12|1|0.01|ENSG00000181143|chr19:8962451-8962452|-/AC|frameshift_variant;REV__MUC16|p.S6098Wfs*23|1|0.17|ENSG00000181143|chr19:8958477-8958478|-/GGTGACATCTCTTGGCCAACTGACCCTGGACACATCAACC|frameshift_variant;REV__MUC16|p.S6614Lfs*30|1|0.04|ENSG00000181143|chr19:8956931-8956932|-/A|frameshift_variant;REV__MUC16|p.S7713Lfs*5|1|0.45|ENSG00000181143|chr19:8953634-8953634|G/-|frameshift_variant;REV__MUC16|p.T7968Nfs*2|1|0.41|ENSG00000181143|chr19:8952867-8952868|-/T|frameshift_variant;REV__MUC16|p.T8791Qfs*38|1|0.31|ENSG00000181143|chr19:8950403-8950403|G/-|frameshift_variant	82.24051045832904	0.17731618517892733	6				NaN	NaN	0	NaN	2972	2632	5604
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5607	18.62	NaN	17565	30	0	5746.6	0.106			+	2010	AKLFTTWKK	9	65	374.89355802068394	1121.6588446622518	3	374.8948669433594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AKLFTTWKK_	REV__ENSG00000196189|ENST00000368285|SEMA4A;REV__ENST00000466698.1_1_1:156130343-156131310:+|nuORF;REV__ENST00000469065.1_1_1:156130802-156132957:+|nuORF;REV__nc|ENSG00000196189|Q9H3S1-2|SEMA4A	65.46538089061403	0.16805504838372562	6				NaN	NaN	0	NaN	2973	2632	5604
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5608	18.621	NaN	3829.5	30	0	448.46	0.106	+			22642	KTVRYAQM	8	62	506.7687759720575	NaN	0	506.7687683105469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_KTVRYAQM(Oxidation (M))_	ENSG00000169718|ENST00000306796|DUS1L;ENST00000578264.1_1_17:80019305-80022125:-|nuORF;ENST00000578846.5_1_17:80019305-80021015:-|nuORF	42.396135135203025	1.7418937515398478	6				NaN	NaN	0	NaN	2974	2632	5604
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5609	18.623	NaN	8775.1	30	0	1659.8	0.106			+	-1	GTPFLLAPCPS	11	65	387.1986113934455	1158.5740047805366	3	387.1998596191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_GTPFLLAPC(Carbamidomethyl (C))PS_	REV__ENST00000576916.5_2_16:3534964-3535735:+|nuORF	29.550750289552195	0.6798279264880025	6				NaN	NaN	0	NaN	2975	2632	5604
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5610	18.625	NaN	5415.3	30	0	922.45	0.106	+			45938	VARPRRSR	8	74	499.309608197672	996.604663462144	2	499.31103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VARPRRSR_	ENSG00000183644|ENST00000375618|HOATZ;nc|ENSG00000183644|Q6PI97-2|HOATZ;nc|ENSG00000183644|Q6PI97-3|HOATZ	47.657333605630114	0.6087971902037268	6				NaN	NaN	0	NaN	2976	2632	5604
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5611	18.627	NaN	3970.8	30	0	1205.3	0.035			+	-1	VLCALIPVI	9	49	333.20878134042954	996.6045146214886	3	333.2098388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_VLC(Carbamidomethyl (C))ALIPVI_	REV__nc|ENSG00000157168|Q02297-10|NRG1	37.15910966729921	0.4535818937225704	6				NaN	NaN	0	NaN	2977	2632	5604
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5629	18.663	NaN	133170	30	0	26007	0.173				-1	 	0	94	363.8650478287521	1088.5733140864563	3	363.8661193847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2992	2635	5628
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5630	18.666	NaN	30468	30	0	16128	0.106				-1	 	0	73	334.7631837508346	667.5118145684693	2	334.763916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2993	2635	5628
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5631	18.668	NaN	51501	30	0	11801	0.106			+	50021	WDDTNRDVL	9	94	567.2645070744818	1132.5144612157635	2	567.2670288085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_WDDTNRDVL_	REV__ENSG00000143669|ENST00000389793|LYST	69.6276240434122	0.14239879520340665	6				NaN	NaN	0	NaN	2994	2635	5628
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5632	18.67	NaN	43921	30	0	4782.9	0.106	+			51034	YKTRHTGIN	9	82	545.2940055029003	1088.5734580726005	2	545.2958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YKTRHTGIN_	ENSG00000256771|ENST00000589717|ZNF253;nc|ENSG00000256771|O75346-2|ZNF253	60.11826168202944	0.21262886028301267	6				NaN	NaN	0	NaN	2995	2635	5628
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5633	18.672	NaN	29423	30	0	3768.7	0.106				-1	 	0	92	341.8646674096109	1022.5721728290328	3	341.8655700683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2996	2635	5628
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5634	18.673	NaN	7032	30	0	1850.4	0.106				-1	 	0	69	454.2570745763097	906.4995962194195	2	454.25811767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	2997	2635	5628
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5635	18.675	NaN	11903	30	0	3267.6	0.037			+	5797	AVIANWSDVAA	11	78	372.8608224292258	1115.5606378878774	3	372.862060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AVIANWSDVAA_	REV__ENSG00000198919|ENST00000361582|DZIP3;REV__ENST00000495008.5_1_3:108373019-108406879:+|nuORF	37.15910966729921	0.5968151027006597	6				NaN	NaN	0	NaN	2998	2635	5628
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5653	18.712	NaN	25068	30	0	4327.7	0.214			+	32093	QSFLVHSQ	8	81	473.24342743899615	944.4723019447923	2	473.2444152832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QSFLVHSQ_	REV__OR5B3|p.V38Gfs*26|1|0.4|ENSG00000172769|chr11:58403297-58403298|-/C|frameshift_variant	79.71258880314673	0.32596852995588826	6				NaN	NaN	0	NaN	3013	2638	5652
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5654	18.716	NaN	12257	30	0	3786.8	0.106	+			817	AEFVRTAEK	9	74	350.85744986813427	1049.550520204603	3	350.85858154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEFVRTAEK_	CCDC112|p.E223Sfs*20|2|0.29|ENSG00000164221|chr5:115275219-115275219|T/-|frameshift_variant;CCDC112|p.R236Gfs*7|1|0.32|ENSG00000164221|chr5:115271590-115271590|T/-|frameshift_variant;ENSG00000164221|ENST00000379611|CCDC112	20.94693142431847	0.6074874384046576	6				NaN	NaN	0	NaN	3014	2638	5652
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5655	18.718	NaN	15245	30	0	2713.8	0.106			+	35648	SCPIAKLPKV	10	82	352.547691713558	1054.621245740874	3	352.548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SCPIAKLPKV_	REV__ENSG00000169122|ENST00000519262|FAM110B	54.776311868738084	0.41334902933431344	6				NaN	NaN	0	NaN	3015	2638	5652
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5656	18.72	NaN	11692	30	0	1117.2	0.106			+	28355	NEKFSKSH	8	71	488.7460090961027	975.4774652590054	2	488.74737548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NEKFSKSH_	REV__ENSG00000111305|ENST00000651961|GSG1;REV__nc|ENSG00000111305|Q2KHT4-2|GSG1;REV__nc|ENSG00000111305|Q2KHT4-3|GSG1;REV__nc|ENSG00000111305|Q2KHT4-5|GSG1;REV__nc|ENSG00000111305|Q2KHT4-6|GSG1;REV__nc|ENSG00000111305|Q2KHT4|GSG1	60.11826168202944	0.5006107059937851	6				NaN	NaN	0	NaN	3016	2638	5652
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5657	18.721	NaN	8574.2	30	0	1974.2	0.106				-1	 	0	60	464.1922448824342	926.3699368316684	2	464.1935119628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3017	2638	5652
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5658	18.723	NaN	15734	30	0	2370.8	0.035			+	44407	TSLPLFCIL	9	82	503.78608252209165	1005.5576121109833	2	503.7876281738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TSLPLFCIL_	REV__ENST00000578804.5_2_17:62499940-62500153:-|nuORF	44.53106598305862	0.36711179743858174	6				NaN	NaN	0	NaN	3018	2638	5652
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5659	18.724	NaN	11844	30	0	2722.4	0.138				-1	 	0	67	443.73373193448555	885.4529109357711	2	443.7348937988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3019	2638	5652
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5677	18.762	NaN	12767000	30	0	3631800	0.047	+			3014	ASFDKAKLK	9	109	336.5344378546052	NaN	0	336.5346374511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASFDKAKLK_	ENSG00000034510|ENST00000233143|TMSB10	45.97224482568171	0.23445038899310136	6				NaN	NaN	0	NaN	3034	2641	5676
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5678	18.763	NaN	3021200	30	0	987750	0.106				-1	 	0	108	504.29630701908656	1006.5780611049731	2	504.2977294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3035	2641	5676
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5679	18.764	NaN	665810	30	0	243460	0.106	+			36516	SFDKAKLK	8	143	468.7778364298155	935.5411199264311	2	468.7790832519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SFDKAKLK_	CON__P21752;ENSG00000034510|ENST00000233143|TMSB10	127.46168284122857	0.2238874366747666	6				NaN	NaN	0	NaN	3036	2641	5676
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5680	18.767	NaN	253570	30	0	95400	0.106			+	14766	GTKSSIRIQ	9	125	330.52993842930016	988.5679858881006	3	330.53094482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTKSSIRIQ_	REV__ENSG00000135521|ENST00000367576|LTV1	55.50420428727701	0.2510918378945873	6				NaN	NaN	0	NaN	3037	2641	5676
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5681	18.768	NaN	18477	30	0	8200.5	0.106	+			14448	GTATTMVSK	9	64	448.23114013671875	NaN	0	448.23114013671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTATTMVSK_	ENSG00000204217|ENST00000374580|BMPR2	150.36159442982594	0.0026033977239465623	6				NaN	NaN	0	NaN	3038	2641	5676
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5682	18.77	NaN	21576	30	0	3030.9	0.106	+			39450	STEKIYIRK	9	83	569.3350219726562	NaN	0	569.3350219726562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STEKIYIRK_	ENSG00000120798|ENST00000333003|NR2C1;ENSG00000177463|ENST00000425241|NR2C2;ENST00000475707.5_1_3:15045421-15079667:+|nuORF;nc|ENSG00000120798|P13056-2|NR2C1;nc|ENSG00000120798|P13056-3|NR2C1;nc|ENSG00000177463|P49116-2|NR2C2;NR2C2|p.F563Lfs*10|1|0.4|ENSG00000177463|chr3:15042899-15042899|T/-|frameshift_variant	94.4091291819064	0.03270814107078442	6				NaN	NaN	0	NaN	3039	2641	5676
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5683	18.772	NaN	77580	30	0	42992	0.106	+			32303	QTPRCWKL	8	81	516.275483960133	1030.5364149870659	2	516.2772216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QTPRCWKL_	ENST00000368460.7_2_1:154920014-154920722:-|nuORF;ENST00000498553.5_1_1:154920014-154920722:-|nuORF	51.33545320467046	0.5859736979383976	6				NaN	NaN	0	NaN	3040	2641	5676
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5684	18.774	NaN	241950	30	0	101980	0.033				-1	 	0	117	425.2621483304698	848.5097437277396	2	425.2630920410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3041	2641	5676
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5717	18.84	NaN	15185	30	0	1722.7	0.214	+			29216	NVTESEDSDV	10	83	547.7270190649033	1093.4394851966065	2	547.7289428710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NVTESEDSDV_	ENSG00000182150|ENST00000653738|ERCC6L2;ENST00000479391.6_3_9:98729892-98767017:+|nuORF;ERCC6L2|p.T191Nfs*22|1|0.04|ENSG00000182150|chr9:96004683-96004683|C/-|frameshift_variant;ERCC6L2|p.T303Hfs*50|1|0.13|ENSG00000182150|chr9:96012537-96012537|A/-|frameshift_variant	47.657333605630114	0.47858658696240314	6				NaN	NaN	0	NaN	3068	2647	5716
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5718	18.843	NaN	7131	30	0	2671.2	0.106	+			31553	QLMKTQEPA	9	67	523.2705673900438	1044.5265818468874	2	523.2727661132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QLMKTQEPA_	CDK12|p.G1271Dfs*23|2|0.26|ENSG00000167258|chr17:39530648-39530648|C/-|frameshift_variant;CDK12|p.P1267Lfs*27|1|0.33|ENSG00000167258|chr17:39530639-39530639|C/-|frameshift_variant;ENSG00000167258|ENST00000447079|CDK12;nc|ENSG00000167258|Q9NYV4-2|CDK12	47.657333605630114	0.33044192980041115	6				NaN	NaN	0	NaN	3069	2647	5716
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5719	18.845	NaN	6161.2	30	0	1444.1	0.106			+	10894	FCSVLGLHR	9	55	344.52011418714557	NaN	0	344.52020263671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FCSVLGLHR_	REV__ENSG00000196663|ENST00000359520|TECPR2;REV__nc|ENSG00000196663|O15040-2|TECPR2	23.04248740728303	0.3589936788096251	6				NaN	NaN	0	NaN	3070	2647	5716
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5720	18.847	NaN	8117.1	30	0	3092.1	0.106	+			9329	EIHMRTHK	8	70	526.2778302855161	1050.541107637832	2	526.280029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EIHMRTHK_	ENSG00000171940|ENST00000371471|ZNF217;ZNF217|p.A693Lfs*10|1|0.48|ENSG00000171940|chr20:53576687-53576687|C/-|frameshift_variant;ZNF217|p.F480Sfs*35|1|0.41|ENSG00000171940|chr20:53578378-53578378|A/-|frameshift_variant	35.61828744233558	0.6843154725607303	6				NaN	NaN	0	NaN	3071	2647	5716
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5721	18.849	NaN	46113	30	0	9531.6	0.106	+			42473	TAMQCRKK	8	89	491.25222890446946	980.489904875739	2	491.253662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_TAM(Oxidation (M))QCRKK_	ADAM23|p.N82Ifs*87|1|0.39|ENSG00000114948|chr2:206445331-206445331|A/-|frameshift_variant	88.64286706044652	0.2815785716369046	6				NaN	NaN	0	NaN	3072	2647	5716
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5722	18.851	NaN	25592	30	0	4755	0.034	+			3590	ASVHNQNGQ	9	75	477.7214731209824	953.4283933087648	2	477.72271728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASVHNQNGQ_	ENSG00000054219|ENST00000263636|LY75;nc|ENSG00000054219|O60449-2|LY75;nc|ENSG00000054219|O60449-3|LY75	74.25504064058377	0.12238981753128622	6				NaN	NaN	0	NaN	3073	2647	5716
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5723	18.851	NaN	1387.8	30	0	181.36	0.143	+			13439	GLHKPVYH	8	46	317.5113525390625	NaN	0	317.5113525390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GLHKPVYH_	ENSG00000172172|ENST00000306185|MRPL13;MRPL13|p.L141Cfs*3|1|0.04|ENSG00000172172|chr8:120414084-120414085|-/CCTAC|frameshift_variant;MRPL13|p.N115Tfs*7|1|0.27|ENSG00000172172|chr8:120419901-120419901|T/-|frameshift_variant	21.70233525837049	1.7418937515398478	6				NaN	NaN	0	NaN	3074	2647	5716
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5741	18.891	NaN	22119	30	0	4692.7	0.214	+			29017	NSQSSSCNGAL	11	91	534.2267717462307	1066.4389905592614	2	534.2289428710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NSQSSSCNGAL_	CLMN|p.H819Mfs*29|1|0.43|ENSG00000165959|chr14:95202894-95202894|G/-|frameshift_variant;CLMN|p.K865Rfs*10|2|0.35|ENSG00000165959|chr14:95196612-95196612|T/-|frameshift_variant;ENSG00000165959|ENST00000298912|CLMN;ENST00000556454.1_1_14:95660863-95677170:-|nuORF	45.97224482568171	0.4762245054624163	6				NaN	NaN	0	NaN	3089	2650	5740
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5742	18.894	NaN	33951	30	0	3263.1	0.106	+			21714	KQKEQAKAE	9	94	530.2917315143728	1058.5689100955456	2	530.2938232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KQKEQAKAE_	ENST00000501897.1_1_8:22925813-22938545:+|nuORF	104.74654710444128	0.034358562718640136	6				NaN	NaN	0	NaN	3090	2650	5740
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5743	18.896	NaN	13366	30	0	2018.8	0.106			+	7482	DGDFSYRQ	8	70	494.2120219234283	986.4094909136567	2	494.2135925292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DGDFSYRQ_	REV__ENSG00000128011|ENST00000248668|LRFN1	65.80317337860623	0.44433089765398776	6				NaN	NaN	0	NaN	3091	2650	5740
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5744	18.898	NaN	26310	30	0	20112	0.106				-1	NSGEKPYKCE	10	59	404.5166283275769	1210.5280555829306	3	404.5180358886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_NSGEKPYKC(Carbamidomethyl (C))E_	ZNF737|p.H251N|1|0.48|ENSG00000237440|chr19:20545452-20545452|G/T|missense_variant	29.550750289552195	0.6385079145554603	6				NaN	NaN	0	NaN	3092	2650	5740
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5745	18.9	NaN	19681	30	0	7721.9	0.106				-1	SLMLEVPALA	10	73	353.8634916575553	1058.568645572866	3	353.8646545410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_SLM(Oxidation (M))LEVPALA_	DMD|p.L3485*|2|0.35|ENSG00000198947|chrX:31169543-31169543|G/-|frameshift_variant;ENSG00000198947|ENST00000357033|DMD;nc|ENSG00000198947|P11532-11|DMD;nc|ENSG00000198947|P11532-12|DMD;nc|ENSG00000198947|P11532-13|DMD;nc|ENSG00000198947|P11532-14|DMD;nc|ENSG00000198947|P11532-15|DMD;nc|ENSG00000198947|P11532-16|DMD;nc|ENSG00000198947|P11532-2|DMD;nc|ENSG00000198947|P11532-3|DMD;nc|ENSG00000198947|P11532-4|DMD;nc|ENSG00000198947|P11532|DMD	28.081489160057373	0.6505064946289502	6				NaN	NaN	0	NaN	3093	2650	5740
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5746	18.902	NaN	8692.8	30	0	944.99	0.034				-1	 	0	82	488.2576221041779	974.5006912751559	2	488.25885009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3094	2650	5740
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5747	18.902	NaN	14071	30	0	2190.8	0.144			+	-1	NSITSHYGCI	10	85	398.51312476872414	1192.5175449063724	3	398.51446533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))NSITSHYGC(Carbamidomethyl (C))I_	REV__ENSG00000196542|ENST00000620149|SPTSSB	29.170058357718403	0.6416167986984785	6				NaN	NaN	0	NaN	3095	2650	5740
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5765	18.939	NaN	53073	30	0	8014.4	0.214				-1	 	0	93	451.73122101253364	901.4478890918673	2	451.73236083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3110	2653	5764
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5766	18.943	NaN	19967	30	0	3268.5	0.106				-1	 	0	67	437.73373259845295	873.4529122637059	2	437.7349548339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3111	2653	5764
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5767	18.945	NaN	16557	30	0	1558.8	0.106				-1	 	0	82	482.2000985484474	962.3856441636948	2	482.2012939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3112	2653	5764
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5768	18.947	NaN	13914	30	0	2107.6	0.106	+			47338	VPDPRAVYCK	10	73	602.813322889574	1203.612092845948	2	602.81591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_VPDPRAVYC(Carbamidomethyl (C))K_	ENSG00000198873|ENST00000392870|GRK5	71.87747018426188	0.26198133118427214	6				NaN	NaN	0	NaN	3113	2653	5764
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5769	18.948	NaN	6575.7	30	0	978.91	0.106				-1	LVVAACGFVL	10	61	350.2004044754592	1047.5793840265776	3	350.20147705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_LVVAAC(Carbamidomethyl (C))GFVL_	ENSG00000168282|ENST00000305386|MGAT2;MGAT2|p.R116Gfs*48|1|0.14|ENSG00000168282|chr14:49621609-49621609|C/-|frameshift_variant	39.252832667884924	0.5560298534376815	6				NaN	NaN	0	NaN	3114	2653	5764
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5770	18.95	NaN	7421.7	30	0	851.52	0.037			+	9593	ELKSVARSLE	10	68	566.3210560406638	1130.6275591481276	2	566.3226928710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ELKSVARSLE_	REV__ENSG00000160299|ENST00000359568|PCNT;REV__nc|ENSG00000160299|O95613-2|PCNT	49.536043120802724	0.461275219792494	6				NaN	NaN	0	NaN	3115	2653	5764
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5771	18.951	NaN	67410	30	0	9252.5	0.14				-1	 	0	102	434.19448425811305	866.3744155830261	2	434.1956481933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3116	2653	5764
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5789	18.99	NaN	32195	30	0	5823.6	0.214	+			13251	GINGDIRAK	9	89	472.2680761485107	942.5215993638215	2	472.2694091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GINGDIRAK_	ENSG00000101076|ENST00000316673|HNF4A;ENST00000372920.1_1_20:43030124-43058302:+|nuORF;nc|ENSG00000101076|P41235-2|HNF4A;nc|ENSG00000101076|P41235-3|HNF4A;nc|ENSG00000101076|P41235-4|HNF4A;nc|ENSG00000101076|P41235-6|HNF4A;nc|ENSG00000101076|P41235-7|HNF4A;nc|ENSG00000101076|P41235|HNF4A	138.06239232086	0.011389075116295402	6				NaN	NaN	0	NaN	3131	2656	5788
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5790	18.994	NaN	82949	30	0	8409.5	0.106				-1	 	0	116	506.7732424384825	1011.531931943765	2	506.77471923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3132	2656	5788
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5791	18.996	NaN	10822	30	0	2309.8	0.106			+	7054	CTGGNACARGA	11	79	490.70556745957725	979.3965819859545	2	490.70697021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_CTGGNACARGA_	REV__ENSG00000090932|ENST00000356433|DLL3;REV__nc|ENSG00000090932|Q9NYJ7|DLL3	35.15202426646627	0.6210751305041943	6				NaN	NaN	0	NaN	3133	2656	5788
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5792	18.998	NaN	12793	30	0	1171.5	0.106	+			40003	STMSACASTAR	11	80	571.748308699712	1141.4820644662238	2	571.7504272460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_STMSAC(Carbamidomethyl (C))ASTAR_	ENST00000566749.5_1_16:30094754-30094823:+|nuORF	156.16072019525166	6.025336435842151E-05	6				NaN	NaN	0	NaN	3134	2656	5788
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5793	18.999	NaN	10472	30	0	1574.7	0.106			+	8330	EAKNPDEGEK	10	91	558.7627880324815	1115.5110231317628	2	558.7647094726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EAKNPDEGEK_	REV__ENSG00000173545|ENST00000308683|ZNF622	48.601550744091256	0.46988609897316763	6				NaN	NaN	0	NaN	3135	2656	5788
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5794	19.001	NaN	11585	30	0	2729.4	0.037			+	8931	EEVVMGRVKL	10	85	588.3256779281887	1174.6368029231774	2	588.3272705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_EEVVM(Oxidation (M))GRVKL_	REV__ENSG00000108506|ENST00000251334|INTS2;REV__INTS2|p.F1100Lfs*26|2|0.29|ENSG00000108506|chr17:61867978-61867978|A/-|frameshift_variant;REV__INTS2|p.T812Sfs*11|1|0.15|ENSG00000108506|chr17:61877931-61877934|TGTT/-|frameshift_variant;REV__nc|ENSG00000108506|Q9H0H0|INTS2	98.62937762414208	0.0817671936103422	6				NaN	NaN	0	NaN	3136	2656	5788
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5795	19.002	NaN	10964	30	0	2202.4	0.14			+	6869	CLCRDQSVL	9	70	518.749373047169	1035.484193161138	2	518.7515869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_CLCRDQSVL_	REV__ENST00000329687.8_1_4:2935791-2936172:-|nuORF	76.7741389293348	0.11149722112137898	6				NaN	NaN	0	NaN	3137	2656	5788
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5813	19.041	NaN	47579	30	0	6485.7	0.182	+			20177	KEKVSTQNL	9	89	523.7960167908064	NaN	0	523.7959594726562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEKVSTQNL_	ENSG00000100342|ENST00000397278|APOL1;nc|ENSG00000100342|O14791-2|APOL1;nc|ENSG00000100342|O14791-3|APOL1	138.06239232086	0.0004957345888817657	6				NaN	NaN	0	NaN	3152	2659	5812
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5814	19.044	NaN	89809	30	0	22182	0.106			+	13623	GMEKMVDRA	9	91	518.749373047169	1035.484193161138	2	518.751220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GMEKMVDRA_	REV__ENSG00000165704|ENST00000298556|HPRT1;REV__HPRT1|p.R48H|1|0.5|ENSG00000165704|chrX:134475189-134475189|G/A|missense_variant	66.42927471994793	0.16001998865088202	6				NaN	NaN	0	NaN	3153	2659	5812
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5815	19.046	NaN	10234	30	0	859.77	0.106	+			4753	ATMQGDREQLK	11	80	638.8197827643612	NaN	0	638.8197021484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATMQGDREQLK_	ADNP|p.Y1033Mfs*48|1|0.33|ENSG00000101126|chr20:50891618-50891618|G/-|frameshift_variant;ENSG00000101126|ENST00000621696|ADNP	211.63386234666172	7.164957380486797E-23	6				NaN	NaN	0	NaN	3154	2659	5812
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5816	19.048	NaN	27701	30	0	5040.4	0.106	+			39992	STMPHTSGMNR	11	82	609.7694431536141	1217.5243333740282	2	609.7716674804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STMPHTSGMNR_	ENSG00000150907|ENST00000379561|FOXO1	90.14881205920913	0.09816545110109878	6				NaN	NaN	0	NaN	3155	2659	5812
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5817	19.05	NaN	19941	30	0	2408.6	0.106				-1	 	0	92	576.802276249775	1151.58999956635	2	576.804443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3156	2659	5812
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5818	19.052	NaN	12578	30	0	3723.9	0.106				-1	 	0	61	414.27542923024873	826.5363055272975	2	414.27667236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3157	2659	5812
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5819	19.054	NaN	12109	30	0	2231.8	0.037	+			20179	KEKWDDAQQ	9	80	574.2722505562571	1146.529948179314	2	574.274658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KEKWDDAQQ_	ADGRB2|p.L1141Cfs*35|1|0.34|ENSG00000121753|chr1:31735214-31735214|G/-|frameshift_variant;ENSG00000121753|ENST00000373658|ADGRB2;nc|ENSG00000121753|O60241-2|ADGRB2;nc|ENSG00000121753|O60241-3|ADGRB2;nc|ENSG00000121753|O60241-4|ADGRB2	78.26377905018397	0.10505600812668463	6				NaN	NaN	0	NaN	3158	2659	5812
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5837	19.09	NaN	534570	30	0	133770	0.137				-1	 	0	110	459.78298156982254	917.5514102064451	2	459.7842102050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3173	2662	5836
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5838	19.092	NaN	51006	30	0	19450	0.106				-1	 	0	77	417.23865930709565	832.4627656809913	2	417.23980712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3174	2662	5836
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5839	19.094	NaN	14746	30	0	797.85	0.106	+			17075	HRLWMQEENND	11	95	736.3223830666291	1470.630213200058	2	736.3240966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HRLWMQEENND_	KIAA0753|p.P804H|1|0.32|ENSG00000198920|chr17:6595001-6595001|G/T|missense_variant	27.64392233501311	0.6998289966465058	6				NaN	NaN	0	NaN	3175	2662	5836
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5840	19.096	NaN	19480	30	0	2614.2	0.106	+			38650	SSIEKTISK	9	84	496.78455288159097	991.554552829982	2	496.7845458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSIEKTISK_	nc|ENSG00000211892|P01861-1|IGHG4;nc|ENSG00000211892|P01861|IGHG4	166.0711670676379	0.003437550387609957	6				NaN	NaN	0	NaN	3176	2662	5836
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5841	19.098	NaN	23354	30	0	3117.9	0.106				-1	 	0	92	507.3253759797616	1012.6361990263232	2	507.3267822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3177	2662	5836
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5842	19.1	NaN	9045.6	30	0	981.3	0.106	+			6718	CADNTGAKNL	10	76	532.2440658518731	1062.473578770546	2	532.2459716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_C(Carbamidomethyl (C))ADNTGAKNL_	ENSG00000125691|ENST00000479035|RPL23;ENST00000584912.5_1_17:37008851-37009963:-|nuORF	72.2432373244024	0.2589930451692646	6				NaN	NaN	0	NaN	3178	2662	5836
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5843	19.101	NaN	36254	30	0	4931.6	0.036			+	21483	KNKGSEKRQ	9	104	358.87218913391075	1073.5947380019322	3	358.87335205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KNKGSEKRQ_	REV__ENSG00000241258|ENST00000395326|CRCP;REV__ENST00000486848.1_1_7:65579949-65599362:+|nuORF	54.776311868738084	0.25715957988447635	6				NaN	NaN	0	NaN	3179	2662	5836
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5861	19.139	NaN	141450	30	0	20869	0.18	+			3015	ASFDKAKLK	9	92	336.5344378546052	NaN	0	336.5343933105469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASFDKAKLK_	ENSG00000034510|ENST00000233143|TMSB10	52.936696900407355	0.1864545979552969	6				NaN	NaN	0	NaN	3194	2665	5860
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5862	19.142	NaN	25210	30	0	5172.1	0.106			+	-1	KQMGWCSMLIQ	11	85	699.3220895945253	1396.6296262558506	2	699.32373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_KQM(Oxidation (M))GWC(Carbamidomethyl (C))SMLIQ_	REV__ENST00000478554.5_1_1:244624707-244662379:+|nuORF	32.75053402867276	0.6462648045997152	6				NaN	NaN	0	NaN	3195	2665	5860
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5863	19.144	NaN	57998	30	0	14561	0.106				-1	AGCLWPLR	8	93	486.7576969599273	971.5008409866546	2	486.7588806152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_AGC(Carbamidomethyl (C))LWPLR_	ENST00000524669.5_1_11:57416059-57416188:-|nuORF	74.51659920185547	0.36926395944126233	6				NaN	NaN	0	NaN	3196	2665	5860
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5864	19.146	NaN	42819	30	0	8940.9	0.106	+			40307	STSSTKRLK	9	103	504.29630701908656	1006.5780611049731	2	504.2976989746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STSSTKRLK_	ENSG00000162599|ENST00000403491|NFIA;nc|ENSG00000162599|Q12857-2|NFIA;nc|ENSG00000162599|Q12857-3|NFIA;nc|ENSG00000162599|Q12857-4|NFIA	49.44154591367651	0.3095138337212152	6				NaN	NaN	0	NaN	3197	2665	5860
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5865	19.148	NaN	14089	30	0	2549.1	0.106	+			33830	RQVLNTRA	8	92	479.28192818522797	956.549303437256	2	479.2828674316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RQVLNTRA_	ENSG00000139044|ENST00000266383|B4GALNT3;ENST00000535402.1_1_12:662343-670614:+|nuORF	73.97473282117947	0.3737790450121076	6				NaN	NaN	0	NaN	3198	2665	5860
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5866	19.15	NaN	34009	30	0	5726.8	0.106				-1	 	0	99	364.70496620786236	727.3953794825247	2	364.7060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3199	2665	5860
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5867	19.152	NaN	16014	30	0	4234.4	0.035	+			31966	QQTRFGKK	8	81	496.78455288159097	991.554552829982	2	497.288818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QQTRFGKK_	ENSG00000155545|ENST00000381199|MIER3;ENSG00000198160|ENST00000401041|MIER1;ENST00000452157.5_1_5:56218957-56234137:-|nuORF;MIER3|p.N345_H346del|1|0.29|ENSG00000155545|chr5:56923929-56923934|ATGGTT/-|inframe_deletion;MIER3|p.R343Dfs*15|4|0.22|ENSG00000155545|chr5:56923940-56923940|T/-|frameshift_variant;nc|ENSG00000155545|Q7Z3K6-2|MIER3;nc|ENSG00000155545|Q7Z3K6-3|MIER3;nc|ENSG00000155545|Q7Z3K6-4|MIER3;nc|ENSG00000198160|Q8N108-13|MIER1;nc|ENSG00000198160|Q8N108-14|MIER1;nc|ENSG00000198160|Q8N108-15|MIER1;nc|ENSG00000198160|Q8N108-16|MIER1;nc|ENSG00000198160|Q8N108-17|MIER1;nc|ENSG00000198160|Q8N108-18|MIER1;nc|ENSG00000198160|Q8N108-19|MIER1;nc|ENSG00000198160|Q8N108|MIER1	50.0245360154114	0.5941082100236891	6				NaN	NaN	0	NaN	3200	2665	5860
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5885	19.189	NaN	14038	30	0	2139.8	0.214			+	32314	QTRAAGRPR	9	83	506.79122031206003	1011.5678876909201	2	506.7926940917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QTRAAGRPR_	REV__ENST00000379542.9_1_6:10748006-10749500:+|nuORF;REV__ENST00000480194.5_1_6:10748006-10756748:+|nuORF;REV__ENST00000491103.5_1_6:10748006-10756744:+|nuORF	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	3215	2668	5884
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5886	19.193	NaN	7068.8	30	0	1223.1	0.106	+			12460	GEDGSGKTTL	10	75	482.7309107109818	963.4472684887636	2	482.7323913574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEDGSGKTTL_	ENSG00000135720|ENST00000258198|DYNC1LI2;nc|ENSG00000135720|O43237-2|DYNC1LI2	89.02883481214508	0.13663399911061233	6				NaN	NaN	0	NaN	3216	2668	5884
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5887	19.195	NaN	15319	30	0	1394	0.106			+	9691	EMAEVINVGE	10	79	545.7576774174087	1089.5008019016173	2	545.7598266601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EMAEVINVGE_	REV__ENST00000527147.1_1_11:100537243-100537690:+|nuORF	54.776311868738084	0.41334902933431344	6				NaN	NaN	0	NaN	3217	2668	5884
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5888	19.197	NaN	19985	30	0	2271.3	0.106			+	11864	FTDENVVGSPC	11	76	612.763744922038	1223.5129369108759	2	612.765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_FTDENVVGSPC(Carbamidomethyl (C))_	REV__ENSG00000182132|ENST00000328939|KCNIP1;REV__nc|ENSG00000182132|Q9NZI2-3|KCNIP1;REV__nc|ENSG00000182132|Q9NZI2-4|KCNIP1;REV__nc|ENSG00000182132|Q9NZI2-5|KCNIP1;REV__nc|ENSG00000182132|Q9NZI2|KCNIP1	65.46538089061403	0.2746690761028526	6				NaN	NaN	0	NaN	3218	2668	5884
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5889	19.199	NaN	13092	30	0	957.43	0.106			+	-1	VLAGGCALQGQ	11	80	358.5198091783444	1072.5375981352333	3	358.52093505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_VLAGGC(Carbamidomethyl (C))ALQGQ_	REV__ENSG00000151006|ENST00000280606|PRSS53;REV__ENST00000486499.1_1_16:31096429-31097399:-|nuORF;REV__ENST00000533518.5_3_16:31095113-31102425:-|nuORF	43.650786325866115	0.5079891456189096	6				NaN	NaN	0	NaN	3219	2668	5884
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5890	19.2	NaN	2604.3	30	0	262.96	0.033	+			45903	VAQGASKAL	9	63	422.7477722167969	NaN	0	422.7477722167969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VAQGASKAL_	ENSG00000275395|ENST00000616721|FCGBP;nc|ENSG00000275395|Q9Y6R7|FCGBP	49.536043120802724	0.20989033510253738	6				NaN	NaN	0	NaN	3220	2668	5884
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5891	19.201	NaN	20891	30	0	6089.1	0.138				-1	 	0	72	438.2495776651984	874.4846023971968	2	438.2506103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3221	2668	5884
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5909	19.239	NaN	331980	30	0	100320	0.147				-1	 	0	135	343.53336034255665	1027.57825162787	3	343.534423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3236	2671	5908
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5910	19.241	NaN	208470	30	0	53836	0.106				-1	 	0	95	537.2814559158377	1072.5483588984753	2	537.283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3237	2671	5908
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5911	19.244	NaN	9252.9	30	0	866.33	0.106			+	41752	SVSLMELLK	9	74	510.29425177136335	1018.5739506095267	2	510.2958068847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVSLMELLK_	REV__ENSG00000095015|ENST00000399503|MAP3K1	44.116797842482775	0.37197099687881774	6				NaN	NaN	0	NaN	3238	2671	5908
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5912	19.245	NaN	16434	30	0	2209.3	0.106			+	18656	ISVCEKLKM	9	92	369.8668417656343	1106.578695897103	3	369.8681945800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_ISVC(Carbamidomethyl (C))EKLKM_	REV__ENSG00000102524|ENST00000375887|TNFSF13B;REV__nc|ENSG00000102524|Q9Y275-2|TNFSF13B;REV__nc|ENSG00000102524|Q9Y275-3|TNFSF13B;REV__TNFSF13B|p.F194Lfs*18|1|0.19|ENSG00000102524|chr13:108303348-108303348|T/-|frameshift_variant	51.19269402634007	0.2889735674168909	6				NaN	NaN	0	NaN	3239	2671	5908
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5913	19.247	NaN	62757	30	0	13805	0.106			+	-1	KKKQDCKK	8	100	531.8074973677136	1061.6004418022271	2	531.808349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_KKKQDC(Carbamidomethyl (C))KK_	REV__ENSG00000108312|ENST00000436088|UBTF;REV__nc|ENSG00000108312|P17480-2|UBTF;REV__UBTF|p.D353Y|1|0.31|ENSG00000108312|chr17:44211322-44211322|C/A|missense_variant	93.19546047674547	0.2677966331495483	6				NaN	NaN	0	NaN	3240	2671	5908
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5914	19.249	NaN	15397	30	0	2756.7	0.106	+			36351	SESSWQLP	8	72	467.2192561820185	932.423959430837	2	467.22076416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SESSWQLP_	nc|ENSG00000187013|Q86X59|LINC02875	45.9519527083369	0.6193794311207887	6				NaN	NaN	0	NaN	3241	2671	5908
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5915	19.251	NaN	6483.1	30	0	644.72	0.035			+	24437	LGCVLLKQV	9	74	324.86875451600315	971.5844341482095	3	324.8697509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LGCVLLKQV_	REV__ENSG00000143797|ENST00000305997|MBOAT2;REV__ENST00000486484.5_1_2:9002434-9143743:-|nuORF;REV__MBOAT2|p.A232V|1|0.42|ENSG00000143797|chr2:8873296-8873296|G/A|missense_variant	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	3242	2671	5908
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5934	19.285	NaN	300960	30	0	41564	0.134	+			28835	NPRHKITKR	9	87	575.3511698716406	1148.6877868100812	2	575.3529663085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NPRHKITKR_	nc|ENSG00000278030|P04435|TRBV7-9	71.87747018426188	0.13267044672804276	6				NaN	NaN	0	NaN	3258	2674	5933
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5935	19.288	NaN	38754	30	0	20764	0.106			+	26775	LVQPRLIPVD	10	66	383.9039323955351	1148.6899677868053	3	383.90447998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LVQPRLIPVD_	REV__HEPACAM|p.S146L|1|0.47|ENSG00000165478|chr11:124924001-124924001|G/A|missense_variant	29.14955571784316	0.6417842315402807	6				NaN	NaN	0	NaN	3259	2674	5933
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5936	19.29	NaN	14120	30	0	3496.3	0.106	+			20112	KEKKLTSDL	9	82	531.3140002015151	NaN	0	531.31396484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KEKKLTSDL_	ENSG00000125844|ENST00000377813|RRBP1;nc|ENSG00000125844|Q9P2E9-3|RRBP1	112.10723106719422	0.007794126129732805	6				NaN	NaN	0	NaN	3260	2674	5933
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5937	19.291	NaN	4561	30	0	355.59	0.106			+	20366	KESMCSVCKN	10	69	593.2544866598735	1184.4944203865468	2	593.2569580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_KESMC(Carbamidomethyl (C))SVCKN_	REV__ENSG00000124789|ENST00000262077|NUP153;REV__nc|ENSG00000124789|P49790-2|NUP153;REV__nc|ENSG00000124789|P49790-3|NUP153;REV__NUP153|p.E1073Kfs*44|1|0.07|ENSG00000124789|chr6:17628983-17628983|T/-|frameshift_variant	54.776311868738084	0.41334902933431344	6				NaN	NaN	0	NaN	3261	2674	5933
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5938	19.293	NaN	19293	30	0	4597.9	0.106			+	-1	QEGECTAQ	8	87	461.68075322722933	921.3469535212587	2	461.6822814941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_QEGEC(Carbamidomethyl (C))TAQ_	REV__ENST00000438378.2_1_2:132278647-132279013:+|nuORF	49.536043120802724	0.597139409391072	6				NaN	NaN	0	NaN	3262	2674	5933
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5939	19.295	NaN	11034	30	0	2051.5	0.106	+			48562	VTPSCCRK	8	70	475.7311726847762	949.4477924363524	2	475.7322082519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_VTPSC(Carbamidomethyl (C))CRK_	ENST00000283943.9_1_2:230632112-230632244:-|nuORF	63.30626980617807	0.4690498839812213	6				NaN	NaN	0	NaN	3263	2674	5933
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5940	19.297	NaN	22239	30	0	8375.4	0.043	+			28692	NMQRWKRIRQR	11	85	524.6321558544068	1570.8746381634205	3	524.96826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NMQRWKRIRQR_	ENSG00000267796|ENST00000301159|LIN37;ENST00000587108.5_1_19:36243860-36245221:+|nuORF;ENST00000590890.1_1_19:36244761-36245221:+|nuORF;ENST00000595455.1_1_19:36244761-36245372:+|nuORF	8.034352218211396	0.8328688476055742	6				NaN	NaN	0	NaN	3264	2674	5933
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5941	19.298	NaN	17359	30	0	2619.5	0.139			+	12131	GAGTHWEGAV	10	85	492.7302498864867	983.4459468397735	2	492.7319030761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_GAGTHWEGAV_	REV__ENST00000596558.6_3_19:18650376-18652505:-|nuORF	45.9519527083369	0.4943008177357963	6				NaN	NaN	0	NaN	3265	2674	5933
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5959	19.337	NaN	65728	30	0	7777.9	0.212				-1	YLRDDDICPD	10	88	641.2743361618687	1280.5341193905374	2	641.2762451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_YLRDDDIC(Carbamidomethyl (C))PD_	tr|U7SWD0|U7SWD0_FUSNUDUF1963domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00981PE=4SV=1	51.19269402634007	0.44601001148513897	6				NaN	NaN	0	NaN	3280	2677	5958
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5960	19.34	NaN	14595	30	0	2121.4	0.106	+			4708	ATLTTTSATSK	11	79	541.2884987122277	1080.5624444912553	2	541.2904052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATLTTTSATSK_	ENSG00000010244|ENST00000394670|ZNF207;ENST00000584696.1_1_17:30693734-30695045:+|nuORF;nc|ENSG00000010244|O43670-2|ZNF207;nc|ENSG00000010244|O43670-3|ZNF207;nc|ENSG00000010244|O43670|ZNF207	109.82975700811294	0.04036548564786578	6				NaN	NaN	0	NaN	3281	2677	5958
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5961	19.342	NaN	9628.7	30	0	1233.3	0.106	+			29047	NTEDRILK	8	81	494.7733128162352	987.5320726992704	2	494.7745056152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NTEDRILK_	ENSG00000164509|ENST00000652347|IL31RA;IL31RA|p.V618A|1|0.14|ENSG00000164509|chr5:55916678-55916678|T/C|missense_variant;nc|ENSG00000164509|Q8NI17-12|IL31RA;nc|ENSG00000164509|Q8NI17-3|IL31RA;nc|ENSG00000164509|Q8NI17-5|IL31RA;nc|ENSG00000164509|Q8NI17-6|IL31RA;nc|ENSG00000164509|Q8NI17|IL31RA	112.41091882917199	0.2438316832735406	6				NaN	NaN	0	NaN	3282	2677	5958
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5962	19.344	NaN	13503	30	0	2285.3	0.106	+			13698	GPQGRAFVH	9	67	484.75498360831693	967.4954142834339	2	484.75640869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GPQGRAFVH_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	85.35947970620816	0.07794846947388434	6				NaN	NaN	0	NaN	3283	2677	5958
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5963	19.346	NaN	89812	30	0	24532	0.106			+	13550	GLSLYPVMVP	10	92	359.20018869899627	1074.5787366971888	3	359.2012939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GLSLYPVMVP_	REV__MGAM|p.W1242L|1|0.31|ENSG00000257335|chr7:142058234-142058234|G/T|missense_variant	38.80614096846853	0.5601458937078225	6				NaN	NaN	0	NaN	3284	2677	5958
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5964	19.348	NaN	6197.7	30	0	1384.5	0.034				-1	LASLMPTDV	9	58	481.74724770831773	961.4799424834355	2	481.7484436035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_LASLM(Oxidation (M))PTDV_	ENSG00000132259|ENST00000379936|CNGA4;nc|ENSG00000132259|Q8IV77-2|CNGA4	44.116797842482775	0.37197099687881774	6				NaN	NaN	0	NaN	3285	2677	5958
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5965	19.348	NaN	24284	30	0	3066.4	0.14	+			15022	GTNGPVDLKK	10	93	514.788797205679	1027.5630414781579	2	514.7905883789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GTNGPVDLKK_	ENSG00000164305|ENST00000308394|CASP3	58.62960593111931	0.3783037861296717	6				NaN	NaN	0	NaN	3286	2677	5958
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5983	19.388	NaN	570060	30	0	247910	0.14	+			10880	FCAKKFAD	8	122	465.2314974314596	928.4484419297193	2	465.2328186035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FCAKKFAD_	ENST00000487284.2_1_7:101917466-101926379:+|nuORF;ENST00000558836.5_1_7:101575863-101926379:+|nuORF;ENST00000560541.5_1_7:101556607-101926379:+|nuORF;nc|ENSG00000257923|P39880-9|CUX1;nc|ENSG00000257923|Q13948-10|CUX1;nc|ENSG00000257923|Q13948-2|CUX1;nc|ENSG00000257923|Q13948-9|CUX1;nc|ENSG00000257923|Q13948|CUX1	55.50420428727701	0.5462892107279674	6				NaN	NaN	0	NaN	3301	2680	5982
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5984	19.39	NaN	131620	30	0	28071	0.106			+	10325	ETSLDLLKQ	9	123	523.7906967297064	1045.5668405262127	2	523.7926635742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ETSLDLLKQ_	REV__ENSG00000127080|ENST00000287996|IPPK	104.74654710444128	0.034358562718640136	6				NaN	NaN	0	NaN	3302	2680	5982
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5985	19.392	NaN	24530	30	0	9149.3	0.106			+	-1	HHTLRHASGGC	11	73	616.788219593573	1231.5618862539459	2	616.790283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_HHTLRHASGGC(Carbamidomethyl (C))_	REV__ENST00000293288.12_1_19:49464748-49464931:+|nuORF	32.81241826257853	0.645615689454792	6				NaN	NaN	0	NaN	3303	2680	5982
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5986	19.394	NaN	26894	30	0	5834.6	0.106			+	13624	GMEKMVDRA	9	86	518.749373047169	1035.484193161138	2	518.7511596679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GMEKMVDRA_	REV__ENSG00000165704|ENST00000298556|HPRT1;REV__HPRT1|p.R48H|1|0.5|ENSG00000165704|chrX:134475189-134475189|G/A|missense_variant	74.25504064058377	0.12238981753128622	6				NaN	NaN	0	NaN	3304	2680	5982
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5987	19.396	NaN	36976	30	0	14970	0.106				-1	 	0	97	340.1843216844731	678.3540904357462	2	340.1853942871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3305	2680	5982
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5988	19.398	NaN	13704	30	0	4153.1	0.106				-1	 	0	64	443.2234844182822	884.4324159033645	2	443.22479248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3306	2680	5982
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	5989	19.4	NaN	9389.7	30	0	1203.9	0.036	+			8627	EDCYILDQG	9	75	556.732257541366	1111.449962149532	2	556.7343139648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_EDC(Carbamidomethyl (C))YILDQG_	ENSG00000127831|ENST00000248444|VIL1;nc|ENSG00000127831|P09327-2|VIL1	73.97473282117947	0.12360187025703594	6				NaN	NaN	0	NaN	3307	2680	5982
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6007	19.435	NaN	14567	30	0	7094.9	0.214				-1	QLFNLLME	8	78	512.2628449601997	1022.5111369871994	2	512.2645874023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_QLFNLLM(Oxidation (M))E_	ENSG00000198700|ENST00000361565|IPO9;ENST00000479374.1_1_1:201816429-201819601:+|nuORF	52.29916861842294	0.578018602984656	6				NaN	NaN	0	NaN	3322	2683	6006
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6008	19.439	NaN	14518	30	0	990.84	0.106			+	18486	ISGGERLRE	9	85	508.7777323162414	NaN	0	508.7777404785156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ISGGERLRE_	REV__ENSG00000168137|ENST00000402198|SETD5;REV__ENST00000413704.5_1_3:9487316-9517772:+|nuORF;REV__ENST00000466242.5_1_3:9484907-9517772:+|nuORF;REV__ENST00000479538.1_1_3:9515132-9516536:+|nuORF;REV__ENST00000486465.5_1_3:9512364-9516346:+|nuORF;REV__ENST00000492939.5_1_3:9514925-9516846:+|nuORF;REV__nc|ENSG00000168137|Q9C0A6-2|SETD5;REV__nc|ENSG00000168137|Q9C0A6-3|SETD5;REV__SETD5|p.T1366Kfs*4|1|0.35|ENSG00000168137|chr3:9475859-9475859|C/-|frameshift_variant	54.776311868738084	0.17377682019723872	6				NaN	NaN	0	NaN	3323	2683	6006
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6009	19.441	NaN	13102	30	0	2477.5	0.106	+			42546	TASATLAHW	9	68	479.2440395322995	956.473526131399	2	479.24462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TASATLAHW_	ENST00000590628.1_1_19:28296677-28296926:+|nuORF	40.5726180659479	0.4135428067754104	6				NaN	NaN	0	NaN	3324	2683	6006
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6010	19.443	NaN	14772	30	0	3179.8	0.106			+	38386	SRTRDGRGP	9	83	501.2653567384689	1000.5161605437378	2	501.2666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SRTRDGRGP_	REV__ADAT1|p.G358Rfs*17|1|0.13|ENSG00000065457|chr16:75608960-75608961|-/T|frameshift_variant;REV__ENSG00000065457|ENST00000564657|ADAT1;REV__nc|ENSG00000065457|Q9BUB4-2|ADAT1	66.42927471994793	0.16001998865088202	6				NaN	NaN	0	NaN	3325	2683	6006
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6011	19.445	NaN	11609	30	0	1486.5	0.106				-1	 	0	66	457.71310622406446	913.4116595149289	2	457.71417236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3326	2683	6006
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6012	19.446	NaN	7604	30	0	558.74	0.036	+			30790	QEAKELARQ	9	71	536.7948622209689	NaN	0	536.78564453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QEAKELARQ_	ENSG00000198833|ENST00000435041|UBE2J1	54.722347961057174	0.17414871455573902	6				NaN	NaN	0	NaN	3327	2683	6006
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6013	19.447	NaN	33163	30	0	3510.7	0.142				-1	 	0	73	586.8155432216765	1171.616533510153	2	586.8173217773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3328	2683	6006
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6032	19.486	NaN	97992	30	0	35022	0.174	+			34588	RVMKALVNR	9	102	543.8304100965124	1085.6462672598248	2	543.8321533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVMKALVNR_	ENSG00000149136|ENST00000278412|SSRP1;ENST00000293880.9_1_11:57098199-57100416:-|nuORF	163.1509380574825	0.003936019289634439	6				NaN	NaN	0	NaN	3344	2686	6031
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6033	19.489	NaN	114830	30	0	15231	0.106			+	33309	RGRRAGHA	8	107	440.7522351635258	879.4899173938517	2	440.7534484863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RGRRAGHA_	REV__ENSG00000103707|ENST00000220058|MTFMT;REV__nc|ENSG00000103707|Q96DP5-2|MTFMT	74.51659920185547	0.36926395944126233	6				NaN	NaN	0	NaN	3345	2686	6031
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6034	19.491	NaN	43337	30	0	10430	0.106	+			3016	ASFDKAKLK	9	88	336.5344378546052	NaN	0	336.5343322753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASFDKAKLK_	ENSG00000034510|ENST00000233143|TMSB10	44.116797842482775	0.2472372736944149	6				NaN	NaN	0	NaN	3346	2686	6031
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6035	19.493	NaN	42918	30	0	4385.3	0.106				-1	 	0	105	835.870482902342	1669.726412871484	2	835.8724365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3347	2686	6031
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6036	19.495	NaN	43928	30	0	5392.2	0.106			+	21296	KLRYQQAPTL	10	97	609.3536911547508	1216.6928293763015	2	609.3557739257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KLRYQQAPTL_	REV__ENSG00000106571|ENST00000395925|GLI3;REV__GLI3|p.P1033Rfs*46|3|0.44|ENSG00000106571|chr7:41965975-41965975|G/-|frameshift_variant	66.42927471994793	0.3073667423445326	6				NaN	NaN	0	NaN	3348	2686	6031
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6037	19.497	NaN	13084	30	0	7106.1	0.106			+	-1	TAPLFMEM	8	73	478.21727523359687	954.4199975339938	2	478.2184753417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_TAPLFM(Oxidation (M))EM_	REV__AP1G1|p.K180T|1|0.38|ENSG00000166747|chr16:71771182-71771182|T/G|missense_variant;REV__ENSG00000166747|ENST00000299980|AP1G1;REV__nc|ENSG00000166747|O43747-2|AP1G1	40.5726180659479	0.6527593143185008	6				NaN	NaN	0	NaN	3349	2686	6031
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6038	19.499	NaN	19095	30	0	2278.1	0.031				-1	 	0	75	362.70752610139243	723.4004992695849	2	362.7086486816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3350	2686	6031
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6057	19.535	NaN	46095	30	0	9913.9	0.188			+	12253	GATPLKQEPL	10	92	527.3018303275192	1052.5891077218382	2	527.8062133789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GATPLKQEPL_	REV__ZNF831|p.S306L|1|0.46|ENSG00000124203|chr20:59191936-59191936|C/T|missense_variant	51.19269402634007	0.44601001148513897	6				NaN	NaN	0	NaN	3366	2689	6056
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6058	19.538	NaN	61128	30	0	17748	0.106			+	-1	SLCKQFRC	8	84	366.8441662692286	1097.5106694078859	3	366.8453063964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_SLC(Carbamidomethyl (C))KQFRC(Carbamidomethyl (C))_	REV__ENSG00000116833|ENST00000367362|NR5A2;REV__ENSG00000119508|ENST00000395097|NR4A3;REV__nc|ENSG00000116833|O00482-2|NR5A2;REV__nc|ENSG00000116833|O00482-3|NR5A2;REV__nc|ENSG00000116833|O00482-4|NR5A2;REV__nc|ENSG00000119508|Q92570-2|NR4A3;REV__nc|ENSG00000119508|Q92570-3|NR4A3;REV__NR4A3|p.R554Efs*13|1|0.12|ENSG00000119508|chr9:99863646-99863646|A/-|frameshift_variant	26.69291269510374	0.7532304684939817	6				NaN	NaN	0	NaN	3367	2689	6056
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6059	19.54	NaN	35235	30	0	3334.6	0.106			+	17978	IHFGGDSLVK	10	113	358.19763986621354	1071.5710901988407	3	358.1988220214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IHFGGDSLVK_	REV__ABHD12B|p.V171I|1|0.13|ENSG00000131969|chr14:50885638-50885638|G/A|missense_variant	47.657333605630114	0.47858658696240314	6				NaN	NaN	0	NaN	3368	2689	6056
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6060	19.542	NaN	29634	30	0	4463.4	0.106				-1	 	0	94	523.8123422546031	1045.610131576006	2	523.814208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3369	2689	6056
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6061	19.543	NaN	26088	30	0	2119.1	0.106				-1	 	0	86	508.29139483878043	1014.5682367443609	2	508.29278564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3370	2689	6056
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6062	19.545	NaN	32010	30	0	3527.9	0.106				-1	 	0	87	500.8097428176948	999.6049327021897	2	500.8111267089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3371	2689	6056
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6063	19.547	NaN	6377.8	30	0	1212.9	0.037			+	8224	EAELLHALAR	10	71	561.8162277481545	1121.6179025631088	2	561.8177490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EAELLHALAR_	REV__ENSG00000102109|ENST00000218230|PCSK1N	64.20726635412375	0.3275756395432415	6				NaN	NaN	0	NaN	3372	2689	6056
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6081	19.585	NaN	52658	30	0	7217.2	0.208	+			28081	NAESGRGQVM	10	93	524.7442420846104	1047.4739312360207	2	524.746337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAESGRGQVM_	ENSG00000008517|ENST00000525643|IL32;nc|ENSG00000008517|P24001-3|IL32;nc|ENSG00000008517|P24001-4|IL32;nc|ENSG00000008517|P24001|IL32	120.30596017624542	0.026897611020491978	6				NaN	NaN	0	NaN	3387	2692	6080
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6082	19.588	NaN	30822	30	0	6560.2	0.106				-1	DKVQSLCYL	9	69	375.85856527603437	1124.553866428303	3	375.85986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_DKVQSLC(Carbamidomethyl (C))YL_	ENSG00000085449|ENST00000233055|WDFY1	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	3388	2692	6080
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6083	19.59	NaN	11566	30	0	2923.9	0.106	+			28429	NEVEQRHTL	9	84	563.2851135431615	1124.555674153123	2	563.286865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NEVEQRHTL_	ENSG00000047410|ENST00000367478|TPR;TPR|p.E1141Dfs*29|1|0.08|ENSG00000047410|chr1:186344085-186344086|-/CAGGTAAA|frameshift_variant;TPR|p.E856D|1|0.2|ENSG00000047410|chr1:186351372-186351372|T/G|missense_variant;TPR|p.P2083Qfs*3|1|0.31|ENSG00000047410|chr1:186323735-186323735|G/-|frameshift_variant;TPR|p.T2133Lfs*63|1|0.03|ENSG00000047410|chr1:186322382-186322383|-/GTACTAATAAG|frameshift_variant;TPR|p.V1142Efs*26|1|0.08|ENSG00000047410|chr1:186344083-186344084|-/TT|frameshift_variant	72.87924865735499	0.12833875048249987	6				NaN	NaN	0	NaN	3389	2692	6080
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6084	19.592	NaN	10145	30	0	1119	0.106	+			5869	AVIRGVTTK	9	75	472.79816995268885	NaN	0	472.7982177734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVIRGVTTK_	ENSG00000175854|ENST00000418976|SWI5;nc|ENSG00000175854|Q1ZZU3|SWI5	70.8162118820467	0.10318768208603292	6				NaN	NaN	0	NaN	3390	2692	6080
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6085	19.594	NaN	4520.6	30	0	449.77	0.106			+	23684	LASSGRSLKA	10	71	495.29147654153877	988.5684001498776	2	495.29278564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LASSGRSLKA_	REV__ENST00000473006.1_1_6:3231803-3231938:-|nuORF	54.776311868738084	0.41334902933431344	6				NaN	NaN	0	NaN	3391	2692	6080
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6086	19.596	NaN	16108	30	0	2554.3	0.106			+	21921	KRTTKSTVS	9	80	504.29630701908656	1006.5780611049731	2	504.2967529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KRTTKSTVS_	REV__ADGB|p.K1379Rfs*12|1|0.29|ENSG00000118492|chr6:146784714-146784714|A/-|frameshift_variant;REV__ADGB|p.S1313Y|1|0.15|ENSG00000118492|chr6:146782095-146782095|C/A|missense_variant;REV__ENSG00000118492|ENST00000397944|ADGB;REV__nc|ENSG00000118492|Q8N7X0-2|ADGB	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	3392	2692	6080
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6087	19.597	NaN	11982	30	0	1683.6	0.034				-1	 	0	75	462.26771027498603	922.5208676167721	2	462.26910400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3393	2692	6080
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6105	19.633	NaN	30127	30	0	4082.1	0.214				-1	MSNNIEDRS	9	94	541.2328700155281	1080.451187097856	2	541.2348022460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))SNNIEDRS_	tr|U7T224|U7T224_FUSNUYcxB-likeproteindomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00442PE=4SV=1	87.75429964447693	0.0711966946989736	6				NaN	NaN	0	NaN	3408	2695	6104
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6106	19.636	NaN	11420	30	0	1454.1	0.106	+			858	AEGTAQQRL	9	81	487.25551760713444	972.4964822810689	2	487.2565612792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEGTAQQRL_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	90.60085204095205	0.06317133949006545	6				NaN	NaN	0	NaN	3409	2695	6104
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6107	19.638	NaN	3663.4	30	0	758.44	0.106	+			12110	GAEIHKNRLNA	11	66	611.8373495076295	1221.6601460820589	2	611.839111328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GAEIHKNRLNA_	tr|U7SPA8|U7SPA8_FUSNUDipeptidaseDOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01683PE=4SV=1	34.08650109265054	0.6322515996262609	6				NaN	NaN	0	NaN	3410	2695	6104
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6108	19.64	NaN	32933	30	0	3560.6	0.106			+	25652	LQVRIRAKC	9	105	543.8304100965124	1085.6462672598248	2	544.3359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LQVRIRAKC_	REV__ENST00000531864.6_1_16:31765215-31805195:+|nuORF	47.657333605630114	0.33044192980041115	6				NaN	NaN	0	NaN	3411	2695	6104
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6109	19.642	NaN	25244	30	0	6201.3	0.106	+			40532	SVAAGFPAGQ	10	67	452.72991208925936	903.4452712453187	2	452.7311706542969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVAAGFPAGQ_	ENSG00000023697|ENST00000428559|DERA;ENST00000528821.5_1_12:16109876-16185684:+|nuORF	37.81151784470057	0.569310847604193	6				NaN	NaN	0	NaN	3412	2695	6104
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6110	19.644	NaN	7622.9	30	0	747.64	0.036	+			21877	KRNETRIR	8	80	536.8198586930134	1071.6251644528268	2	536.8217163085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KRNETRIR_	ENST00000463074.1_1_2:233421184-233421241:+|nuORF	44.377184641726394	0.6291511924298419	6				NaN	NaN	0	NaN	3413	2695	6104
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6111	19.644	NaN	23436	30	0	4032.6	0.139				-1	 	0	77	401.7230915901369	801.4316302470738	2	401.7242736816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3414	2695	6104
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6129	19.684	NaN	63637	30	0	9520.5	0.185			+	11389	FLLYTKACE	9	102	544.27840895881	1086.54226498442	2	544.2803955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FLLYTKACE_	REV__ENSG00000117385|ENST00000296388|P3H1;REV__ENST00000460031.5_1_1:43220834-43232642:-|nuORF;REV__ENST00000495874.5_1_1:43222117-43232675:-|nuORF;REV__nc|ENSG00000117385|Q32P28-2|P3H1;REV__nc|ENSG00000117385|Q32P28-3|P3H1;REV__nc|ENSG00000117385|Q32P28-4|P3H1;REV__P3H1|p.R359Vfs*40|1|0.29|ENSG00000117385|chr1:42757788-42757788|G/-|frameshift_variant	74.25504064058377	0.12238981753128622	6				NaN	NaN	0	NaN	3429	2698	6128
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6130	19.687	NaN	84504	30	0	33264	0.106			+	19122	IYLMTVQGF	9	95	363.187993368451	1086.542150705553	3	363.1891784667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_IYLM(Oxidation (M))TVQGF_	REV__ENSG00000170967|ENST00000302259|DDI1	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	3430	2698	6128
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6131	19.689	NaN	20105	30	0	4355.4	0.106	+			39432	STEDVTVSGR	10	86	525.7571100806271	1049.499667228054	2	525.759033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STEDVTVSGR_	ENSG00000159212|ENST00000349499|CLIC6;nc|ENSG00000159212|Q96NY7|CLIC6	69.6276240434122	0.2803623802747859	6				NaN	NaN	0	NaN	3431	2698	6128
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6132	19.691	NaN	18382	30	0	1844.5	0.106	+			24020	LEEELDELK	9	86	559.2840789916885	1116.5536050501769	2	559.2859497070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LEEELDELK_	CNTLN|p.C821Lfs*2|1|0.17|ENSG00000044459|chr9:17394913-17394914|-/T|frameshift_variant;CNTLN|p.I1388Nfs*3|1|0.3|ENSG00000044459|chr9:17502587-17502588|-/A|frameshift_variant;CNTLN|p.K1130Rfs*14|1|0.25|ENSG00000044459|chr9:17462996-17462996|A/-|frameshift_variant;CNTLN|p.M1308*|1|0.36|ENSG00000044459|chr9:17484355-17484355|A/-|frameshift_variant;CNTLN|p.M1308Nfs*9|1|0.46|ENSG00000044459|chr9:17484354-17484355|-/A|frameshift_variant;CNTLN|p.T1324Dfs*27|1|0.14|ENSG00000044459|chr9:17484406-17484407|-/A|frameshift_variant;ENSG00000044459|ENST00000380647|CNTLN;nc|ENSG00000044459|Q9NXG0|CNTLN	96.0336014099291	0.047854655524928534	6				NaN	NaN	0	NaN	3432	2698	6128
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6133	19.693	NaN	40721	30	0	9531.7	0.106				-1	 	0	71	401.2437173280781	800.4728817229562	2	401.2449645996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3433	2698	6128
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6134	19.694	NaN	16702	30	0	5483.1	0.106			+	42166	SYTKGTLHPN	10	65	373.19155394481237	1116.5528324346371	3	373.192626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SYTKGTLHPN_	REV__ENSG00000112902|ENST00000382496|SEMA5A	30.568863376406313	0.6301935916953115	6				NaN	NaN	0	NaN	3434	2698	6128
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6135	19.696	NaN	35066	30	0	4059.3	0.035	+			42291	TAEGYGFKQ	9	92	500.7396150491431	999.4646771650862	2	500.74237060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TAEGYGFKQ_	ENSG00000060656|ENST00000373779|PTPRU;nc|ENSG00000060656|Q92729-3|PTPRU;nc|ENSG00000060656|Q92729-4|PTPRU;nc|ENSG00000060656|Q92729|PTPRU;TRNAU1AP-PTPRU|1|fusion;TRNAU1AP-PTPRU|2|fusion;TRNAU1AP-PTPRU|3|fusion	93.19546047674547	0.05585629608842056	6				NaN	NaN	0	NaN	3435	2698	6128
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6153	19.734	NaN	63332	30	0	15340	0.214			+	13751	GQDKYDTFC	9	86	538.7216326744732	1075.4287124157463	2	538.7234497070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GQDKYDTFC_	REV__ENSG00000111331|ENST00000228928|OAS3	63.30626980617807	0.18605348971131092	6				NaN	NaN	0	NaN	3450	2701	6152
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6154	19.737	NaN	58174	30	0	7281	0.106			+	9862	EQEDRESL	8	91	503.22772765521927	1004.4409023772386	2	503.22918701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EQEDRESL_	REV__DSTYK|p.L848Afs*3|1|0.28|ENSG00000133059|chr1:205148266-205148267|-/T|frameshift_variant;REV__ENSG00000133059|ENST00000367162|DSTYK;REV__nc|ENSG00000133059|Q6XUX3-2|DSTYK;REV__nc|ENSG00000133059|Q6XUX3-3|DSTYK	44.116797842482775	0.6307669463330267	6				NaN	NaN	0	NaN	3451	2701	6152
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6155	19.739	NaN	98541	30	0	10669	0.106			+	8432	EARDYTLQQ	9	96	562.2720816971382	1122.5296104610763	2	562.2744750976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EARDYTLQQ_	REV__ENST00000311925.6_2_9:34689771-34689972:-|nuORF;REV__ENST00000485502.1_1_9:34689771-34689993:-|nuORF	116.90359126533652	0.02307425081617795	6				NaN	NaN	0	NaN	3452	2701	6152
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6156	19.741	NaN	26189	30	0	4521.4	0.106				-1	 	0	88	530.2915563787516	1058.568559824303	2	530.2935180664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3453	2701	6152
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6157	19.743	NaN	10641	30	0	2684.7	0.106				-1	 	0	74	340.8770756303732	1019.6093974913197	3	340.8781433105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3454	2701	6152
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6158	19.745	NaN	14596	30	0	1870.1	0.036	+			30652	QATVENPKIT	10	80	550.8012546360715	1099.5879563389428	2	550.8035888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QATVENPKIT_	tr|U7SFA7|U7SFA7_FUSNUPepSYdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02318PE=4SV=1	66.96192283764107	0.30252237217063654	6				NaN	NaN	0	NaN	3455	2701	6152
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6159	19.746	NaN	11866	30	0	3818.2	0.145	+			40123	STPNPKIASSV	11	67	367.5366831156856	1099.588219947257	3	367.5378723144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STPNPKIASSV_	ENSG00000139350|ENST00000266742|NEDD1;nc|ENSG00000139350|Q8NHV4-2|NEDD1;nc|ENSG00000139350|Q8NHV4-3|NEDD1	32.81241826257853	0.645615689454792	6				NaN	NaN	0	NaN	3456	2701	6152
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6177	19.784	NaN	119080	30	0	59310	0.214				-1	 	0	103	339.22446623805286	1014.6515693143585	3	339.22552490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3471	2704	6176
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6178	19.788	NaN	39777	30	0	4839.9	0.106	+			13340	GKRRSKKR	8	104	508.3331559864955	1014.651759039791	2	508.3346252441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GKRRSKKR_	ZC3H4|p.E114G|1|0.31|ENSG00000130749|chr19:47094429-47094429|T/C|missense_variant	56.43379154798735	0.5370864305160253	6				NaN	NaN	0	NaN	3472	2704	6176
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6179	19.79	NaN	59116	30	0	26147	0.106				-1	AKMRASVRM	9	79	355.85992416669256	1064.5579431002777	3	355.86102294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_AKMRASVRM(Oxidation (M))_	ADCY2|p.R914Sfs*9|1|0.46|ENSG00000078295|chr5:7802326-7802327|-/T|frameshift_variant;ENSG00000078295|ENST00000338316|ADCY2;nc|ENSG00000078295|Q08462-2|ADCY2	39.252832667884924	0.4290233611298554	6				NaN	NaN	0	NaN	3473	2704	6176
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6180	19.792	NaN	14549	30	0	4028	0.106				-1	 	0	77	465.29108109816127	928.5676092631226	2	465.292236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3474	2704	6176
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6181	19.793	NaN	9044.8	30	0	835.51	0.106	+			27875	MTKCDVTGGK	10	80	520.247416600871	1038.480280268542	2	520.249267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MTKCDVTGGK_	ITGB8|p.K437T|1|0.33|ENSG00000105855|chr7:20401749-20401749|A/C|missense_variant	65.46538089061403	0.31613324008013116	6				NaN	NaN	0	NaN	3475	2704	6176
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6182	19.795	NaN	15717	30	0	1893.7	0.036			+	2539	AQAGARHAQR	10	86	533.286382708811	1064.5582124844218	2	533.2882690429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AQAGARHAQR_	REV__CNNM2|p.W228Vfs*183|1|0.44|ENSG00000148842|chr10:102919155-102919156|-/C|frameshift_variant	93.5975768576971	0.11047702954938905	6				NaN	NaN	0	NaN	3476	2704	6176
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6183	19.796	NaN	8069	30	0	1461.8	0.143			+	-1	RRCAEAPVSF	10	74	596.7993001313397	1191.5840473294793	2	596.801513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_RRC(Carbamidomethyl (C))AEAPVSF_	REV__ENSG00000007516|ENST00000426824|BAIAP3;REV__nc|ENSG00000007516|O94812-2|BAIAP3;REV__nc|ENSG00000007516|O94812-3|BAIAP3;REV__nc|ENSG00000007516|O94812-5|BAIAP3;REV__nc|ENSG00000007516|O94812-7|BAIAP3;REV__nc|ENSG00000007516|O94812|BAIAP3	54.776311868738084	0.41334902933431344	6				NaN	NaN	0	NaN	3477	2704	6176
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6201	19.835	NaN	55139	30	0	25616	0.212	+			32147	QSPGARTW	8	72	451.7278632289494	901.4411735246988	2	451.72900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QSPGARTW_	ENST00000599569.2_1_21:46491968-46492376:-|nuORF	47.657333605630114	0.6087971902037268	6				NaN	NaN	0	NaN	3492	2707	6200
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6202	19.839	NaN	46598	30	0	10675	0.106			+	21505	KNLSRSKRKT	10	91	609.375207965142	1216.7358629970838	2	609.3768310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KNLSRSKRKT_	REV__ENSG00000104237|ENST00000220676|RP1;REV__RP1|p.C1315Yfs*12|1|0.06|ENSG00000104237|chr8:54627825-54627826|-/ATTTACA|frameshift_variant;REV__RP1|p.H1831Mfs*17|1|0.32|ENSG00000104237|chr8:54629369-54629369|T/-|frameshift_variant;REV__RP1|p.K1581Nfs*7|1|0.44|ENSG00000104237|chr8:54628619-54628619|A/-|frameshift_variant;REV__RP1|p.L1493Vfs*4|1|0.09|ENSG00000104237|chr8:54628358-54628359|-/GTCCGTGG|frameshift_variant;REV__RP1|p.P1282Lfs*12|1|0.33|ENSG00000104237|chr8:54627719-54627719|T/-|frameshift_variant;REV__RP1|p.P1648Lfs*62|1|0.32|ENSG00000104237|chr8:54628817-54628817|T/-|frameshift_variant;REV__RP1|p.P901Tfs*2|1|0.35|ENSG00000104237|chr8:54626576-54626577|-/A|frameshift_variant;REV__RP1|p.R793Efs*55|4|0.41|ENSG00000104237|chr8:54626253-54626253|A/-|frameshift_variant	51.52775601994872	0.4429225830406686	6				NaN	NaN	0	NaN	3493	2707	6200
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6203	19.841	NaN	13060	30	0	2796.7	0.106	+			12650	GEIKIHKM	8	74	478.27302168348547	NaN	0	478.2730712890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEIKIHKM_	ENSG00000050405|ENST00000341247|LIMA1;ENST00000552045.1_1_12:50589526-50594661:-|nuORF;LIMA1|p.T536Lfs*38|2|0.4|ENSG00000050405|chr12:50177739-50177739|G/-|frameshift_variant;nc|ENSG00000050405|Q9UHB6-2|LIMA1;nc|ENSG00000050405|Q9UHB6-4|LIMA1;nc|ENSG00000050405|Q9UHB6-5|LIMA1	76.7741389293348	1.7418937515398478	6				NaN	NaN	0	NaN	3494	2707	6200
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6204	19.843	NaN	22105	30	0	4953.4	0.106			+	34989	SAARPRRPP	9	80	336.5344378546052	NaN	0	336.5342712402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SAARPRRPP_	REV__PLEKHM1|p.E649Rfs*62|1|0.26|ENSG00000225190|chr17:45453908-45453908|G/-|frameshift_variant	24.20275056022122	0.35506675290109213	6				NaN	NaN	0	NaN	3495	2707	6200
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6205	19.845	NaN	6471	30	0	1038.9	0.106			+	31669	QNHFPVDTYEY	11	80	706.8096078359823	1411.6046627387645	2	706.8113403320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QNHFPVDTYEY_	REV__ENSG00000105088|ENST00000264833|OLFM2	45.97224482568171	0.4762245054624163	6				NaN	NaN	0	NaN	3496	2707	6200
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6206	19.846	NaN	6838.6	30	0	693.49	0.034	+			41185	SVLAQQAAK	9	69	458.2653181897659	914.5160834463318	2	458.2662658691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVLAQQAAK_	ENSG00000134248|ENST00000602318|LAMTOR5;ENST00000531779.1_1_1:110946539-110950281:-|nuORF	90.60085204095205	0.06317133949006545	6				NaN	NaN	0	NaN	3497	2707	6200
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6207	19.847	NaN	15956	30	0	5275.7	0.141	+			16817	HPDKKIVAY	9	75	535.8015441487196	1069.588535364239	2	535.8035888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HPDKKIVAY_	ATXN10|p.F455Lfs*10|1|0.3|ENSG00000130638|chr22:45843115-45843115|T/-|frameshift_variant;ENSG00000130638|ENST00000252934|ATXN10;nc|ENSG00000130638|Q9UBB4-2|ATXN10	96.0336014099291	0.047854655524928534	6				NaN	NaN	0	NaN	3498	2707	6200
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6225	19.886	NaN	16869	30	0	5196.8	0.214				-1	SLLVMVISP	9	81	339.52828504483705	1015.5630257347111	3	339.529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))SLLVM(Oxidation (M))VISP_	ENSG00000147383|ENST00000370274|NSDHL;NSDHL|p.I318T|1|0.38|ENSG00000147383|chrX:152868947-152868947|T/C|missense_variant	37.81151784470057	0.4459294069877048	6				NaN	NaN	0	NaN	3513	2710	6224
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6226	19.89	NaN	20363	30	0	12593	0.106				-1	CGFPVKAL	8	68	446.2414243718043	890.4682958104087	2	446.2425842285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_C(Carbamidomethyl (C))GFPVKAL_	ENST00000473986.1_1_2:69009370-69040541:+|nuORF	54.76467175910256	0.5536104764165384	6				NaN	NaN	0	NaN	3514	2710	6224
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6227	19.892	NaN	14541	30	0	2087	0.106	+			43861	TMAPPIKSK	9	79	486.7791495475547	971.5437461619094	2	486.7808837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TMAPPIKSK_	ENSG00000132669|ENST00000255006|RIN2;nc|ENSG00000132669|Q8WYP3-2|RIN2;RIN2|p.D879Gfs*3|1|0.16|ENSG00000132669|chr20:20000731-20000732|-/G|frameshift_variant;RIN2|p.I627Hfs*7|1|0.47|ENSG00000132669|chr20:19975749-19975750|-/C|frameshift_variant;RIN2|p.I627Sfs*4|2|0.25|ENSG00000132669|chr20:19975750-19975750|C/-|frameshift_variant	83.6470233535746	0.08277643980271215	6				NaN	NaN	0	NaN	3515	2710	6224
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6228	19.894	NaN	6691.7	30	0	1266.4	0.106			+	6101	AVNMPIIPIGL	11	61	379.8949326351817	1136.662968505745	3	379.8961486816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVNMPIIPIGL_	REV__ARAP2|p.T628P|1|0.27|ENSG00000047365|chr4:36167023-36167023|T/G|missense_variant	37.50817390946774	0.5920388381045607	6				NaN	NaN	0	NaN	3516	2710	6224
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6229	19.896	NaN	8487.7	30	0	1382.3	0.106	+			13654	GMWSWAVVT	9	73	518.749373047169	1035.484193161138	2	518.751220703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GMWSWAVVT_	ENSG00000151881|ENST00000397080|TMEM267	47.91560031466742	0.327412564698279	6				NaN	NaN	0	NaN	3517	2710	6224
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6230	19.898	NaN	9811	30	0	1226.9	0.037	+			37692	SLSKTWCAQD	10	69	569.7634799939042	1137.5124070546083	2	569.7657470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLSKTWCAQD_	ENSG00000188761|ENST00000393316|BCL2L15	47.95952297671804	0.47580206326914537	6				NaN	NaN	0	NaN	3518	2710	6224
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6231	19.898	NaN	9440.4	30	0	1457.7	0.14			+	22468	KTLVSASHGK	10	74	514.2964890522384	1026.5784251712766	2	514.2985229492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KTLVSASHGK_	REV__ENST00000533409.1_1_11:59951353-59951413:-|nuORF	70.8162118820467	0.27065172005956	6				NaN	NaN	0	NaN	3519	2710	6224
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6249	19.938	NaN	44811	30	0	4482	0.196			+	21082	KKMPVFKQ	8	96	503.29896571700056	1004.5833785008011	2	503.3004150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KKMPVFKQ_	REV__tr|U7SH81|U7SH81_FUSNUPhage-Barnase-EndoU-ColicinE5/D-RelElikenuclease4domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02192PE=4SV=1	57.81127852772723	0.5234495074909924	6				NaN	NaN	0	NaN	3534	2713	6248
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6250	19.941	NaN	25269	30	0	2222.2	0.106			+	25207	LMKVQEST	8	75	476.2458588013209	950.4771646694418	2	476.2480773925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LM(Oxidation (M))KVQEST_	REV__KHK|p.A143T|1|0.17|ENSG00000138030|chr2:27097512-27097512|G/A|missense_variant	73.97473282117947	0.3737790450121076	6				NaN	NaN	0	NaN	3535	2713	6248
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6251	19.943	NaN	26225	30	0	14826	0.106				-1	 	0	59	443.75187123100307	885.4891895288062	2	443.75311279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3536	2713	6248
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6252	19.945	NaN	10566	30	0	1198	0.106	+			37840	SNIEEVVQW	9	81	552.2737241300016	1102.532895326803	2	552.2760009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SNIEEVVQW_	tr|U7T4M0|U7T4M0_FUSNUCobW/HypB/UreGnucleotide-bindingdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00363PE=4SV=1	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	3537	2713	6248
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6253	19.947	NaN	6885.3	30	0	1116	0.106				-1	 	0	59	472.7784629346143	943.5423729360286	2	472.77947998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3538	2713	6248
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6254	19.948	NaN	23686	30	0	5612.2	0.106				-1	 	0	78	379.21247679300205	756.4104006528041	2	379.2137145996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3539	2713	6248
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6255	19.95	NaN	8983.9	30	0	2651.1	0.034				-1	HLAFPPMT	8	72	465.2314974314596	928.4484419297193	2	465.2327880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_HLAFPPM(Oxidation (M))T_	nc|ENSG00000030304|O15146-2|MUSK;nc|ENSG00000030304|O15146-3|MUSK	28.2542754592877	0.7411748056684583	6				NaN	NaN	0	NaN	3540	2713	6248
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6273	19.988	NaN	34924	30	0	3395.9	0.212				-1	 	0	93	451.76755075767596	901.520548582152	2	451.7686767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3555	2716	6272
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6274	19.991	NaN	60719	30	0	16678	0.106				-1	KTFAMKILK	9	89	548.3334676846318	1094.6523824360636	2	548.33544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_KTFAM(Oxidation (M))KILK_	ENSG00000185532|ENST00000373980|PRKG1;ENST00000373975.2_1_10:53822369-54053657:+|nuORF;nc|ENSG00000185532|Q13976-3|PRKG1;nc|ENSG00000185532|Q13976|PRKG1	74.25504064058377	0.12238981753128622	6				NaN	NaN	0	NaN	3556	2716	6272
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6275	19.994	NaN	19504	30	0	9978	0.106			+	37735	SLTLNMLY	8	73	485.74973776375407	969.4849225943082	2	485.75091552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_SLTLNM(Oxidation (M))LY_	REV__nc|ENSG00000163564|Q6K0P9-5|PYHIN1;REV__nc|ENSG00000163564|Q6K0P9-6|PYHIN1	50.0245360154114	0.5941082100236891	6				NaN	NaN	0	NaN	3557	2716	6272
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6276	19.995	NaN	6776.5	30	0	788.98	0.106			+	22914	KVNWLQLS	8	78	494.28471737962843	986.5548818260569	2	494.2862854003906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KVNWLQLS_	REV__ENSG00000134987|ENST00000513710|WDR36;REV__ENST00000505303.5_1_5:110428043-110447004:+|nuORF;REV__nc|ENSG00000134987|Q8NI36|WDR36;REV__WDR36|p.S397Lfs*28|1|0.05|ENSG00000134987|chr5:111104809-111104810|-/TCTAC|frameshift_variant;REV__WDR36|p.S397Mfs*16|1|0.03|ENSG00000134987|chr5:111104811-111104812|-/T|frameshift_variant	55.50420428727701	0.5462892107279674	6				NaN	NaN	0	NaN	3558	2716	6272
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6277	19.997	NaN	8008.1	30	0	1987.8	0.106				-1	 	0	65	437.75192597825844	873.4892990233169	2	437.7530517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3559	2716	6272
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6278	19.999	NaN	7955.2	30	0	797.96	0.034				-1	 	0	83	480.2965551221235	958.578557311047	2	480.2976379394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3560	2716	6272
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6279	20	NaN	3329	30	0	313.97	0.138				-1	 	0	62	321.6993365286478	641.3841201240956	2	321.7002258300781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3561	2716	6272
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6297	20.037	NaN	94311	30	0	15825	0.17	+			1668	AGRHVGARGA	10	107	476.2651817087326	950.5158104842652	2	476.2662353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AGRHVGARGA_	ENST00000356663.7_2_19:1014392-1021086:-|nuORF	66.42927471994793	0.3073667423445326	6				NaN	NaN	0	NaN	3576	2719	6296
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6298	20.04	NaN	27499	30	0	7902.8	0.106			+	35017	SACMRRIL	8	82	483.2548072021562	964.4950614711124	2	483.2559509277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_SACM(Oxidation (M))RRIL_	REV__ENSG00000167261|ENST00000393847|DPEP2;REV__ENST00000268795.5_1_16:68025943-68026051:-|nuORF;REV__nc|ENSG00000167261|Q9H4A9-2|DPEP2;REV__nc|ENSG00000167261|Q9H4A9-3|DPEP2	47.91560031466742	0.6071945918984287	6				NaN	NaN	0	NaN	3577	2719	6296
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6299	20.042	NaN	11296	30	0	1266.5	0.106				-1	 	0	66	332.7096454509391	663.4047379686782	2	332.7106018066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3578	2719	6296
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6300	20.044	NaN	27085	30	0	5659	0.106			+	47998	VSQFKSPAK	9	82	496.2819887873252	990.5494246414504	2	496.2837219238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSQFKSPAK_	REV__ENSG00000170579|ENST00000315677|DLGAP1;REV__nc|ENSG00000170579|O14490-2|DLGAP1;REV__nc|ENSG00000170579|O14490-3|DLGAP1;REV__nc|ENSG00000170579|O14490-4|DLGAP1;REV__nc|ENSG00000170579|O14490-5|DLGAP1;REV__nc|ENSG00000170579|O14490-6|DLGAP1;REV__nc|ENSG00000170579|O14490-7|DLGAP1	91.26522074875469	0.06129826844580791	6				NaN	NaN	0	NaN	3579	2719	6296
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6301	20.046	NaN	13605	30	0	1886.6	0.106			+	-1	VNLMGADITMQ	11	87	604.7864644436959	1207.5583759541917	2	604.78955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_VNLMGADITM(Oxidation (M))Q_	REV__KPNA7|p.A321T|1|0.26|ENSG00000185467|chr7:99185102-99185102|C/T|missense_variant	38.753607047826485	0.5749975102143227	6				NaN	NaN	0	NaN	3580	2719	6296
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6302	20.048	NaN	16124	30	0	2437	0.106				-1	KSSMDGAQNQ	10	82	541.2328700155281	1080.451187097856	2	541.2859497070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_KSSM(Oxidation (M))DGAQNQ_	ENSG00000166833|ENST00000349880|NAV2;NAV2|p.V2057Wfs*16|1|0.23|ENSG00000166833|chr11:20095744-20095744|G/-|frameshift_variant;nc|ENSG00000166833|Q8IVL1-10|NAV2;nc|ENSG00000166833|Q8IVL1-11|NAV2;nc|ENSG00000166833|Q8IVL1-12|NAV2;nc|ENSG00000166833|Q8IVL1-13|NAV2;nc|ENSG00000166833|Q8IVL1-2|NAV2;nc|ENSG00000166833|Q8IVL1-4|NAV2;nc|ENSG00000166833|Q8IVL1-5|NAV2;nc|ENSG00000166833|Q8IVL1-8|NAV2;nc|ENSG00000166833|Q8IVL1-9|NAV2;nc|ENSG00000166833|Q8IVL1|NAV2	58.22992032128504	0.38193887838457763	6				NaN	NaN	0	NaN	3581	2719	6296
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6303	20.05	NaN	11015	30	0	1672.3	0.035			+	-1	ELFAALMAK	9	77	505.273389946684	1008.532226960168	2	505.2747497558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_ELFAALM(Oxidation (M))AK_	REV__nc|ENSG00000290757|Q5NE16|CTSL3P	66.42927471994793	0.16001998865088202	6				NaN	NaN	0	NaN	3582	2719	6296
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6321	20.087	NaN	39729	30	0	3378	0.214	+			23815	LCQRWSLL	8	87	509.77796246515203	1017.5413719971041	2	509.774658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LCQRWSLL_	SECTM1|p.D143Tfs*43|1|0.19|ENSG00000141574|chr17:82322989-82322989|G/-|frameshift_variant	102.7733458925114	0.2491487235419157	6				NaN	NaN	0	NaN	3597	2722	6320
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6322	20.091	NaN	17820	30	0	2036.6	0.106	+			1204	AEQESARQL	9	77	516.2577595494431	1030.5009661656861	2	516.2593383789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEQESARQL_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	120.30596017624542	0.02101454110788768	6				NaN	NaN	0	NaN	3598	2722	6320
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6323	20.093	NaN	20615	30	0	3386.7	0.106			+	35883	SEENKVLVT	9	89	340.18531020212095	1017.5341012065628	3	340.1854553222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SEENKVLVT_	REV__CON__ENSEMBL:ENSBTAP00000024146	44.116797842482775	0.37197099687881774	6				NaN	NaN	0	NaN	3599	2722	6320
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6324	20.095	NaN	18425	30	0	1746.8	0.106	+			44333	TSGGPERSRK	10	88	537.7864373638429	1073.5583217944857	2	537.7886352539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TSGGPERSRK_	ENSG00000130749|ENST00000253048|ZC3H4;ZC3H4|p.G1158Afs*102|1|0.26|ENSG00000130749|chr19:47066795-47066795|C/-|frameshift_variant;ZC3H4|p.V998Cfs*146|1|0.21|ENSG00000130749|chr19:47067277-47067277|G/-|frameshift_variant;ZC3H4|p.V998Rfs*47|1|0.27|ENSG00000130749|chr19:47067276-47067277|-/G|frameshift_variant	63.53385203322761	0.33370026130094593	6				NaN	NaN	0	NaN	3600	2722	6320
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6325	20.097	NaN	60317	30	0	11149	0.106			+	44259	TSALFQLKK	9	89	518.3133042447674	1034.6120555563348	2	518.3152465820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TSALFQLKK_	REV__HERVH-int_dup3527|chrX:4542813-4545870:-|8.094520876636611|0.0139942278604804|9.18|476.0|40|2|sense	68.78682469695295	0.14603441672067394	6				NaN	NaN	0	NaN	3601	2722	6320
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6326	20.098	NaN	11434	30	0	2110.9	0.036	+			22494	KTNPTHSATR	10	88	556.7937020577976	1111.5728511823952	2	556.7957763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KTNPTHSATR_	ENSG00000123485|ENST00000411486|HJURP;nc|ENSG00000123485|Q8NCD3-2|HJURP;nc|ENSG00000123485|Q8NCD3-3|HJURP	51.19269402634007	0.44601001148513897	6				NaN	NaN	0	NaN	3602	2722	6320
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6327	20.099	NaN	4901.8	30	0	642.56	0.145			+	-1	SIIIMFTLSL	10	44	385.2226777086713	1152.646203726214	3	385.2239685058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_SIIIM(Oxidation (M))FTLSL_	REV__tr|U7T2M4|U7T2M4_FUSNUPeptide/nickeltransportsystempermeaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00626PE=3SV=1	41.42661286455405	0.5359995577334734	6				NaN	NaN	0	NaN	3603	2722	6320
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6345	20.137	NaN	393830	30	0	51818	0.059			+	9978	ERGRGEKR	8	84	494.27552521408234	986.5364974949647	2	494.2770690917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ERGRGEKR_	REV__ENST00000548860.5_1_12:49209223-49210729:+|nuORF	58.78195531508484	0.5138399468736706	6				NaN	NaN	0	NaN	3618	2725	6344
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6346	20.138	NaN	164170	30	0	17732	0.041	+			3054	ASFKMDPLI	9	89	511.27325414130723	1020.5319553494145	2	511.2747497558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASFKMDPLI_	ENSG00000010282|ENST00000441594|HHATL	75.04331003522576	0.118981335847003	6				NaN	NaN	0	NaN	3619	2725	6344
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6347	20.138	NaN	100390	30	0	13024	0.071	+			23841	LCWLPRDQK	9	89	579.8074977180017	1157.6004425028034	2	579.8092651367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LCWLPRDQK_	ENSG00000164654|ENST00000340080|MIOS;MIOS|p.L817Ifs*5|1|0.38|ENSG00000164654|chr7:7605982-7605983|-/A|frameshift_variant;nc|ENSG00000164654|Q9NXC5-2|MIOS	76.7741389293348	0.11149722112137898	6				NaN	NaN	0	NaN	3620	2725	6344
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6348	20.14	NaN	85431	30	0	25634	0.076				-1	 	0	72	450.2313117837137	898.4480706342274	2	450.2324523925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3621	2725	6344
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6349	20.141	NaN	43537	30	0	7562.5	0.106				-1	 	0	92	489.2910954088646	976.5676378845292	2	489.2923278808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3622	2725	6344
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6350	20.143	NaN	35472	30	0	3863.2	0.106			+	20962	KKEEVLKRGQ	10	109	405.57868998564754	1213.7142405571426	3	405.5799560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KKEEVLKRGQ_	REV__CCDC127|p.C174*|1|0.12|ENSG00000164366|chr5:205558-205558|G/-|frameshift_variant;REV__ENSG00000164366|ENST00000296824|CCDC127	54.722347961057174	0.4138398245444204	6				NaN	NaN	0	NaN	3623	2725	6344
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6351	20.145	NaN	20664	30	0	6127.5	0.106	+			12839	GENVDWVEM	9	85	547.7265452238307	1093.4385375144614	2	547.7288208007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_GENVDWVEM(Oxidation (M))_	ENST00000369096.8_1_6:106534297-106536103:+|nuORF	73.97473282117947	0.12360187025703594	6				NaN	NaN	0	NaN	3624	2725	6344
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6352	20.147	NaN	33552	30	0	4116.6	0.106				-1	 	0	96	473.7987815030166	945.5830100728332	2	474.7803955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3625	2725	6344
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6353	20.149	NaN	6888.8	30	0	461.56	0.038	+			9123	EGLGEELLQCE	11	82	610.2795152220124	1218.5444775108247	2	610.2813110351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	9	Unmodified	_EGLGEELLQCE_	ENSG00000163482|ENST00000295709|STK36;nc|ENSG00000163482|Q9NRP7-2|STK36	49.536043120802724	0.4274608637932522	6				NaN	NaN	0	NaN	3626	2725	6344
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6371	20.186	NaN	26007	30	0	3738.7	0.214				-1	 	0	83	473.7987815030166	945.5830100728332	2	473.7998962402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3641	2728	6370
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6372	20.19	NaN	19225	30	0	4058.5	0.106	+			3017	ASFDKAKLK	9	80	336.5344378546052	NaN	0	336.5342102050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASFDKAKLK_	ENSG00000034510|ENST00000233143|TMSB10	31.529811441608018	0.3183796599642538	6				NaN	NaN	0	NaN	3642	2728	6370
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6373	20.192	NaN	8827.2	30	0	1499.3	0.106				-1	 	0	68	343.8926465808723	1028.6561103428169	3	343.8936462402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3643	2728	6370
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6374	20.194	NaN	8855.7	30	0	2527.2	0.106			+	6973	CPTGWKEL	8	74	467.22831004635736	932.4420671595147	2	467.2294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_CPTGWKEL_	REV__ENST00000367765.5_1_1:170015969-170024554:-|nuORF	60.97194046774394	0.49215940876911696	6				NaN	NaN	0	NaN	3644	2728	6370
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6375	20.195	NaN	17237	30	0	4731.1	0.106	+			1971	AIYGTRKFK	9	67	542.3170999568821	1082.619646980564	2	542.3192749023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AIYGTRKFK_	ENSG00000197629|ENST00000361050|MPEG1	126.24258497203832	0.01742065577488747	6				NaN	NaN	0	NaN	3645	2728	6370
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6376	20.197	NaN	3437	30	0	615.07	0.036			+	8843	EEMAKLIPH	9	72	534.2850772117916	NaN	0	534.2833251953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EEMAKLIPH_	REV__ENSG00000163617|ENST00000295878|CCDC191;REV__ENST00000295878.7_1_3:113721354-113723512:-|nuORF	47.657333605630114	0.2228375344433429	6				NaN	NaN	0	NaN	3646	2728	6370
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6377	20.198	NaN	6945	30	0	725.09	0.145			+	19012	IVWNEKLEK	9	68	386.89104075405123	NaN	0	386.8909606933594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IVWNEKLEK_	REV__ENST00000332843.2_1_8:120079524-120116116:+|nuORF	40.05817265558897	0.275207446262312	6				NaN	NaN	0	NaN	3647	2728	6370
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6395	20.236	NaN	29272	30	0	3889.2	0.214			+	29492	PCTTSRLSRC	10	88	562.2711626756737	1122.5277724181474	2	562.2730102539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PCTTSRLSRC_	REV__ENST00000395811.9_1_17:17090115-17090496:+|nuORF	77.31757898189308	0.2175361111083648	6				NaN	NaN	0	NaN	3662	2731	6394
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6396	20.24	NaN	18502	30	0	2688.2	0.106				-1	 	0	95	342.20852722531583	1023.6037522761476	3	342.2096252441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3663	2731	6394
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6397	20.242	NaN	9140.9	30	0	1386.1	0.106	+			2962	ASEVLKHLK	9	75	512.809288592526	1023.6040242518519	2	512.81103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASEVLKHLK_	ENSG00000089053|ENST00000261819|ANAPC5;ENST00000534976.5_1_12:121756302-121773353:-|nuORF;ENST00000535641.5_1_12:121746285-121765135:-|nuORF;ENST00000545218.5_1_12:121756099-121775126:-|nuORF;nc|ENSG00000089053|Q9UJX4-3|ANAPC5	136.26810882979174	0.012230845423532208	6				NaN	NaN	0	NaN	3664	2731	6394
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6398	20.244	NaN	22858	30	0	6057.8	0.106			+	2114	ALGRPNTLNK	10	81	361.88039788198535	1082.619364246156	3	361.8816833496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ALGRPNTLNK_	REV__ENSG00000081479|ENST00000649046|LRP2	52.936696900407355	0.4300801048568001	6				NaN	NaN	0	NaN	3665	2731	6394
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6399	20.245	NaN	6505.9	30	0	411.27	0.106	+			38165	SQCDAIRVTK	10	74	589.3015702922702	1176.5885876513403	2	589.3035888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_SQC(Carbamidomethyl (C))DAIRVTK_	ENSG00000120008|ENST00000263461|WDR11;WDR11|p.L1134Gfs*5|1|0.26|ENSG00000120008|chr10:120905977-120905978|CC/-|frameshift_variant;WDR11|p.Q977Sfs*9|1|0.27|ENSG00000120008|chr10:120903226-120903227|-/T|frameshift_variant;WDR11|p.V841Cfs*15|1|0.07|ENSG00000120008|chr10:120900034-120900034|G/-|frameshift_variant	105.16503226865211	0.06235809640390954	6				NaN	NaN	0	NaN	3666	2731	6394
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6400	20.247	NaN	6812.3	30	0	3214.9	0.033			+	-1	ETLLLMGP	8	54	445.2391593193447	888.4637657054894	2	445.2403259277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_ETLLLM(Oxidation (M))GP_	REV__nc|ENSG00000137872|Q8NFY4-2|SEMA6D;REV__nc|ENSG00000137872|Q8NFY4-5|SEMA6D	39.021493756699265	0.6623843612266921	6				NaN	NaN	0	NaN	3667	2731	6394
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6401	20.248	NaN	13220	30	0	3904	0.138	+			12273	GAWSPGGLK	9	76	436.73488774002885	871.4552225468577	2	437.2372131347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GAWSPGGLK_	ENST00000355827.8_1_X:95939790-95940039:+|nuORF	37.15910966729921	0.4535818937225704	6				NaN	NaN	0	NaN	3668	2731	6394
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6419	20.287	NaN	18542	30	0	3556.6	0.214			+	23480	LAEWSVPLK	9	90	521.8018619877209	1041.5891710422418	2	521.803955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LAEWSVPLK_	REV__ENST00000332549.7_1_2:102608419-102626165:+|nuORF;REV__ENST00000464994.5_1_2:102608489-102626165:+|nuORF	66.42927471994793	0.16001998865088202	6				NaN	NaN	0	NaN	3683	2734	6418
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6420	20.291	NaN	12490	30	0	1638.6	0.106			+	2351	AMTSRTKE	8	66	462.23279434475427	922.4510357563086	2	462.23419189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AMTSRTKE_	REV__ENST00000576058.2_1_16:13552215-13552527:+|nuORF	112.41091882917199	0.2438316832735406	6				NaN	NaN	0	NaN	3684	2734	6418
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6421	20.293	NaN	28571	30	0	4710.8	0.106				-1	 	0	87	530.3098460893589	1058.6051392455176	2	530.3118286132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3685	2734	6418
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6422	20.295	NaN	6667.3	30	0	2649.7	0.106			+	48890	VVDEQALWHG	10	59	385.19116317137866	1152.551660114336	3	385.19268798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVDEQALWHG_	REV__ENSG00000104133|ENST00000261866|SPG11;REV__nc|ENSG00000104133|Q96JI7-2|SPG11;REV__nc|ENSG00000104133|Q96JI7-3|SPG11	33.921630207806714	0.6028135429846169	6				NaN	NaN	0	NaN	3686	2734	6418
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6423	20.296	NaN	9499.7	30	0	1686.7	0.106	+			25298	LPAETMRIVL	10	71	381.5582825310116	1141.6530181932349	3	381.5594787597656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LPAETMRIVL_	ENSG00000170242|ENST00000527733|USP47;nc|ENSG00000170242|Q96K76-2|USP47;nc|ENSG00000170242|Q96K76|USP47;USP47|p.G1121Efs*22|2|0.29|ENSG00000170242|chr11:11948505-11948505|A/-|frameshift_variant	42.86426827375447	0.522752283233888	6				NaN	NaN	0	NaN	3687	2734	6418
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6424	20.298	NaN	7922.7	30	0	650.22	0.036			+	-1	LMAFVVVAVV	10	81	355.21235723981044	1062.6152423196313	3	355.2134094238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_LM(Oxidation (M))AFVVVAVV_	REV__ENSG00000182985|ENST00000331581|CADM1;REV__ENST00000537140.5_1_11:115040311-115375169:-|nuORF;REV__ENST00000545960.5_1_11:115040311-115061650:-|nuORF;REV__ENST00000546000.1_1_11:115047196-115049577:-|nuORF;REV__nc|ENSG00000182985|Q9BY67-4|CADM1;REV__nc|ENSG00000182985|Q9BY67-5|CADM1;REV__nc|ENSG00000182985|Q9BY67|CADM1	24.519189625965996	0.6795976720565101	6				NaN	NaN	0	NaN	3688	2734	6418
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6425	20.299	NaN	15398	30	0	965.79	0.141			+	9322	EIEYRLMI	8	87	533.7859369770042	NaN	0	533.7855834960938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EIEYRLMI_	REV__tr|U7SZM4|U7SZM4_FUSNUMetal-dependentcarboxypeptidaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00798PE=3SV=1	45.9519527083369	1.7418937515398478	6				NaN	NaN	0	NaN	3689	2734	6418
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6443	20.338	NaN	106970	30	0	39695	0.184			+	-1	STIFPLMLH	9	90	358.86001587119335	1073.55821821378	3	358.8611145019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_STIFPLM(Oxidation (M))LH_	REV__ENSG00000147475|ENST00000519638|ERLIN2;REV__ENST00000519872.1_1_8:37594193-37598024:+|nuORF;REV__ENST00000521993.2_1_8:37597892-37607371:+|nuORF;REV__nc|ENSG00000147475|O94905-2|ERLIN2;REV__nc|ENSG00000147475|O94905-3|ERLIN2	35.61828744233558	0.47037581924408073	6				NaN	NaN	0	NaN	3704	2737	6442
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6444	20.341	NaN	47756	30	0	9221.3	0.106				-1	 	0	93	400.19955076855746	798.3845486039149	2	400.2007141113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3705	2737	6442
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6445	20.343	NaN	43939	30	0	12452	0.106			+	36916	SIINFMKGI	9	95	346.86010375777784	1037.5584818735335	3	346.8610534667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_SIINFM(Oxidation (M))KGI_	REV__L1ME1_dup14741|chr8:25510836-25512219:-|1.4707505823140987|0.2188578600898351|2.75|482.0|54|3|sense	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	3706	2737	6442
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6446	20.345	NaN	47156	30	0	8386.2	0.106			+	29554	PERAERAPLG	10	98	548.2991628305616	1094.5837727279231	2	548.3011474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PERAERAPLG_	REV__ENST00000382592.4_1_13:21635502-21635673:-|nuORF	69.6276240434122	0.2803623802747859	6				NaN	NaN	0	NaN	3707	2737	6442
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6447	20.347	NaN	55808	30	0	22545	0.106			+	37984	SPIFATRILQ	10	76	382.5605322084467	1144.6597672255402	3	382.56182861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SPIFATRILQ_	REV__tr|U7T655|U7T655_FUSNUDNApolymerasebacteriophage-typeOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00113PE=3SV=1	33.921630207806714	0.6028135429846169	6				NaN	NaN	0	NaN	3708	2737	6442
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6448	20.349	NaN	9466.1	30	0	1193.3	0.106	+			32650	RAAERSSALR	10	84	558.81514654465	1115.6157401561	2	558.8172607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RAAERSSALR_	ENSG00000137497|ENST00000393695|NUMA1;nc|ENSG00000137497|Q14980-2|NUMA1;nc|ENSG00000137497|Q14980-3|NUMA1;nc|ENSG00000137497|Q14980-4|NUMA1;NUMA1|p.K1766Rfs*2|1|0.39|ENSG00000137497|chr11:72007357-72007357|G/-|frameshift_variant;NUMA1|p.L1786Pfs*18|1|0.23|ENSG00000137497|chr11:72007295-72007296|-/G|frameshift_variant	61.691277971877994	0.35045824941635534	6				NaN	NaN	0	NaN	3709	2737	6442
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6449	20.351	NaN	28710	30	0	4100.8	0.034				-1	 	0	80	475.2757059325119	948.5368589318239	2	475.27655029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3710	2737	6442
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6467	20.387	NaN	86473	30	0	15696	0.198				-1	 	0	89	451.69183873087803	901.3691245285561	2	451.69305419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3725	2740	6466
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6468	20.391	NaN	96125	30	0	34828	0.106	+			30577	QANRSQKPT	9	112	343.8529871118071	1028.5371319356213	3	343.8540954589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QANRSQKPT_	ENST00000300952.6_1_19:1257715-1257928:+|nuORF	58.78195531508484	0.22376836668196862	6				NaN	NaN	0	NaN	3726	2740	6466
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6469	20.393	NaN	81847	30	0	9661.5	0.106	+			27744	MQNMSIHTK	9	116	545.2610410355769	1088.5075291379537	2	545.2633056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MQNMSIHTK_	CON__H-INV:HIT000292931;CON__P05787;CON__REFSEQ:XP_092267;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	140.11223852658463	0.010427410095706195	6				NaN	NaN	0	NaN	3727	2740	6466
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6470	20.395	NaN	11660	30	0	1194.7	0.106	+			20708	KGRLCKVSLC	10	84	553.8119561730592	1105.6093594129184	2	553.8141479492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KGRLCKVSLC_	ENST00000523879.5_3_14:91580571-91625235:+|nuORF	58.78195531508484	0.37691818691852547	6				NaN	NaN	0	NaN	3728	2740	6466
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6471	20.397	NaN	20563	30	0	1858	0.106	+			7084	CVPTRKAQL	9	88	508.2901047827243	1014.5656566322486	2	508.2923583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_CVPTRKAQL_	ENSG00000112576|ENST00000372991|CCND3;ENST00000505672.5_1_6:41904922-42016364:-|nuORF;nc|ENSG00000112576|P30281-2|CCND3	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	3729	2740	6466
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6472	20.398	NaN	16483	30	0	5652.1	0.106			+	30280	PTGPRPFT	8	67	436.73488774002885	871.4552225468577	2	436.73638916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PTGPRPFT_	REV__ENSG00000164591|ENST00000517768|MYOZ3	47.657333605630114	0.6087971902037268	6				NaN	NaN	0	NaN	3730	2740	6466
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6473	20.4	NaN	8515.6	30	0	2463.9	0.036	+			12326	GDHYDALRD	9	72	531.2360519321779	1060.4575509311558	2	531.2380981445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GDHYDALRD_	ENSG00000142784|ENST00000319394|WDTC1;ENST00000491239.2_1_1:27614218-27630434:+|nuORF;nc|ENSG00000142784|Q8N5D0-2|WDTC1;nc|ENSG00000142784|Q8N5D0-3|WDTC1;nc|ENSG00000142784|Q8N5D0-4|WDTC1;nc|ENSG00000142784|Q8N5D0-5|WDTC1;nc|ENSG00000142784|Q8N5D0-6|WDTC1	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	3731	2740	6466
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6491	20.436	NaN	19390	30	0	3463.9	0.214			+	50916	YGMDWLIGQ	9	85	541.750420564235	1081.48628819527	2	541.7523193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YGMDWLIGQ_	REV__ENST00000483327.5_1_7:56132001-56140978:+|nuORF	58.78195531508484	0.22376836668196862	6				NaN	NaN	0	NaN	3746	2743	6490
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6492	20.44	NaN	14139	30	0	1272.6	0.106				-1	 	0	75	467.7623184119715	933.510083890743	2	467.7634582519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3747	2743	6490
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6493	20.442	NaN	16310	30	0	1473.6	0.106	+			39814	STLGGRLQAK	10	88	515.8038464095902	NaN	0	515.8037109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STLGGRLQAK_	ENSG00000178950|ENST00000314167|GAK;GAK|p.L730*|1|0.09|ENSG00000178950|chr4:870772-870772|C/-|frameshift_variant;GAK|p.P1133Lfs*23|1|0.3|ENSG00000178950|chr4:851860-851860|G/-|frameshift_variant;GAK|p.P955Lfs*36|1|0.25|ENSG00000178950|chr4:866964-866964|G/-|frameshift_variant;GAK|p.S905Pfs*40|1|0.15|ENSG00000178950|chr4:867116-867116|G/-|frameshift_variant;GAK|p.V881Gfs*39|1|0.23|ENSG00000178950|chr4:867186-867187|-/C|frameshift_variant;nc|ENSG00000178950|O14976-2|GAK	120.8684288430529	0.018634423183165875	6				NaN	NaN	0	NaN	3748	2743	6490
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6494	20.444	NaN	10015	30	0	2397.3	0.106	+			48882	VVDCGTGYTK	10	75	550.2584655168273	NaN	0	550.2584838867188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_VVDC(Carbamidomethyl (C))GTGYTK_	ACTR3B-JMJD1C|1|fusion;ENSG00000115091|ENST00000263238|ACTR3;ENSG00000133627|ENST00000256001|ACTR3B;nc|ENSG00000133627|Q9P1U1-3|ACTR3B	104.42354056486148	0.008502086549193488	6				NaN	NaN	0	NaN	3749	2743	6490
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6495	20.446	NaN	6466.1	30	0	1248.5	0.106	+			8914	EEVKDRCTL	9	72	575.2803668208873	1148.5461807085744	2	575.2821044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_EEVKDRC(Carbamidomethyl (C))TL_	ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65622809-65623088:-|nuORF	85.16082228582465	0.07850854922700509	6				NaN	NaN	0	NaN	3750	2743	6490
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6496	20.448	NaN	6557.2	30	0	622.74	0.036			+	-1	IMQGRTCVT	9	76	533.7554389433866	1065.496324953573	2	533.757080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))IM(Oxidation (M))QGRTCVT_	REV__ENST00000280326.8_1_5:10263393-10264773:+|nuORF	34.172542307311794	0.4838870758800184	6				NaN	NaN	0	NaN	3751	2743	6490
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6497	20.448	NaN	9669.4	30	0	1413.2	0.139				-1	 	0	73	483.77059932962334	965.5266457260467	2	483.7715148925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3752	2743	6490
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6515	20.488	NaN	29884	30	0	6103.2	0.209			+	149	AAIARRTR	8	98	457.7857204689577	913.5568880047155	2	457.786865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAIARRTR_	REV__ENSG00000257008|ENST00000582579|GPR142;REV__nc|ENSG00000257008|Q7Z601|GPR142	76.7741389293348	0.3504530765139327	6				NaN	NaN	0	NaN	3767	2746	6514
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6516	20.491	NaN	26087	30	0	3612.3	0.106				-1	 	0	90	537.7864373638429	1073.5583217944857	2	537.7883911132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3768	2746	6514
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6517	20.493	NaN	14419	30	0	2890.1	0.106			+	-1	VISMNKLKV	9	63	349.8818113861231	NaN	0	349.88177490234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_VISM(Oxidation (M))NKLKV_	REV__tr|U7T2M7|U7T2M7_FUSNUGalactokinaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=galKPE=3SV=1	54.776311868738084	0.17377682019723872	6				NaN	NaN	0	NaN	3769	2746	6514
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6518	20.495	NaN	21305	30	0	2572.8	0.106	+			22554	KTSGRRSLRL	10	88	587.3620310374087	1172.7095091416172	2	587.3638916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTSGRRSLRL_	ENST00000485396.5_1_3:137963948-137982602:+|nuORF	56.632244143249146	0.3964695498866976	6				NaN	NaN	0	NaN	3770	2746	6514
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6519	20.497	NaN	7902.6	30	0	915.29	0.106				-1	 	0	75	480.20254711675597	958.390541300312	2	480.20361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3771	2746	6514
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6520	20.499	NaN	10269	30	0	1630.9	0.036			+	9149	EGNAECRCR	9	75	547.7265452238307	1093.4385375144614	2	547.7288818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_EGNAECRC(Carbamidomethyl (C))R_	REV__ENSG00000188730|ENST00000340652|VWC2	51.33545320467046	0.2872990594074956	6				NaN	NaN	0	NaN	3772	2746	6514
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6521	20.499	NaN	8103.1	30	0	768.47	0.14			+	6796	CFSPLSTAY	9	71	494.72606386439065	987.4375747955813	2	494.7276306152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_CFSPLSTAY_	REV__ENSG00000100036|ENST00000343605|SLC35E4	38.80614096846853	0.43426287593479557	6				NaN	NaN	0	NaN	3773	2746	6514
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6539	20.539	NaN	83977	30	0	48028	0.143				-1	 	0	69	334.1785738914567	999.5138922745703	3	334.17962646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3788	2749	6538
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6540	20.541	NaN	60914	30	0	29374	0.102				-1	 	0	78	366.2277742362749	1095.6614933090248	3	366.22894287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3789	2749	6538
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6541	20.543	NaN	43894	30	0	9710.7	0.099			+	18194	IMGSHSAK	8	80	415.71159251251805	829.4086320918361	2	415.7129211425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IMGSHSAK_	REV__ENSG00000101384|ENST00000254958|JAG1	68.484700416344	0.4195245774506064	6				NaN	NaN	0	NaN	3790	2749	6538
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6542	20.545	NaN	236770	30	0	27481	0.106	+			818	AEGAAGRQSEL	11	120	544.7700535212613	1087.5255541093225	2	544.7723388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEGAAGRQSEL_	ENSG00000012963|ENST00000013070|UBR7	98.58198989935565	0.06364242648159563	6				NaN	NaN	0	NaN	3791	2749	6538
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6543	20.547	NaN	26953	30	0	6612.2	0.106	+			32827	RCGCKNDA	8	72	490.7054981312701	979.3964433293402	2	490.706787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C)	_RC(Carbamidomethyl (C))GC(Carbamidomethyl (C))KNDA_	ENSG00000145794|ENST00000503335|MEGF10;MEGF10|p.N964Mfs*2|1|0.49|ENSG00000145794|chr5:127449129-127449129|A/-|frameshift_variant;nc|ENSG00000145794|Q96KG7-2|MEGF10	53.351449002276354	0.5676011784961348	6				NaN	NaN	0	NaN	3792	2749	6538
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6544	20.548	NaN	96081	30	0	18444	0.106			+	32854	RCVERPMPT	9	91	363.51606635226227	1087.5263696569868	3	363.5171813964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RCVERPMPT_	REV__ENSG00000143669|ENST00000389793|LYST;REV__LYST|p.F2078Lfs*38|1|0.35|ENSG00000143669|chr1:235762739-235762739|A/-|frameshift_variant	58.78195531508484	0.22376836668196862	6				NaN	NaN	0	NaN	3793	2749	6538
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6545	20.55	NaN	12215	30	0	2426.6	0.035	+			43348	TGATLYLLR	9	69	336.5344378546052	NaN	0	336.5342712402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TGATLYLLR_	ENSG00000189043|ENST00000339600|NDUFA4;ENST00000486007.1_1_7:10977674-10979684:-|nuORF;NDUFA4|p.A37T|1|0.4|ENSG00000189043|chr7:10938830-10938830|C/T|missense_variant	30.503639358989545	0.3235605894931338	6				NaN	NaN	0	NaN	3794	2749	6538
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6563	20.585	NaN	61150	30	0	9759.9	0.214				-1	 	0	94	437.2416609160866	872.4687688989732	2	437.2427978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3809	2752	6562
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6564	20.588	NaN	24648	30	0	3683.5	0.106				-1	 	0	85	454.270468341377	906.526383749554	2	454.27142333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3810	2752	6562
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6565	20.591	NaN	18045	30	0	2681.2	0.106	+			20639	KGGTLQRSTS	10	76	517.783794667092	1033.553036400984	2	517.7850952148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KGGTLQRSTS_	ENSG00000196535|ENST00000527372|MYO18A;nc|ENSG00000196535|Q92614-2|MYO18A;nc|ENSG00000196535|Q92614-3|MYO18A;nc|ENSG00000196535|Q92614-4|MYO18A;nc|ENSG00000196535|Q92614-5|MYO18A	65.46538089061403	0.31613324008013116	6				NaN	NaN	0	NaN	3811	2752	6562
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6566	20.592	NaN	5755	30	0	1532.7	0.106	+			47960	VSMLPSELLRR	11	66	434.25156367225395	1299.7328616169618	3	434.25274658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSMLPSELLRR_	tr|U7T6I2|U7T6I2_FUSNUUncharacterizedAAAdomain-containingproteinycf46OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00249PE=3SV=1	41.080066990542036	0.5431644350485484	6				NaN	NaN	0	NaN	3812	2752	6562
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6567	20.594	NaN	16581	30	0	1838.4	0.106				-1	QRLNSCET	8	84	504.23292718365263	1006.4513014341053	2	504.2343444824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_QRLNSC(Carbamidomethyl (C))ET_	ENSG00000130559|ENST00000389532|CAMSAP1;ENST00000483991.5_1_9:138703157-138717996:-|nuORF;nc|ENSG00000130559|Q5T5Y3-2|CAMSAP1;nc|ENSG00000130559|Q5T5Y3-3|CAMSAP1	55.50420428727701	0.5462892107279674	6				NaN	NaN	0	NaN	3813	2752	6562
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6568	20.596	NaN	9326.2	30	0	773.91	0.036				-1	QCDVCGRIF	9	82	549.2449897828712	1096.4754266325424	2	549.2468872070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_QCDVC(Carbamidomethyl (C))GRIF_	ENSG00000197608|ENST00000594440|ZNF841;nc|ENSG00000197608|Q6ZN19-2|ZNF841;nc|ENSG00000197608|Q6ZN19|ZNF841	58.78195531508484	0.22376836668196862	6				NaN	NaN	0	NaN	3814	2752	6562
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6569	20.597	NaN	13824	30	0	5852.8	0.14				-1	 	0	78	527.3047304687162	1052.5949080042324	2	527.3063354492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3815	2752	6562
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6587	20.636	NaN	91303	30	0	20002	0.161				-1	 	0	94	493.7549873652372	985.4954217972744	2	493.7564392089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3830	2755	6586
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6588	20.639	NaN	21691	30	0	8509.6	0.106			+	14261	GSTFFIAMI	9	70	329.5056794285889	985.4952088859668	3	329.5067443847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSTFFIAMI_	REV__ACSM3|p.T549Nfs*29|2|0.31|ENSG00000005187|chr16:20796453-20796454|-/A|frameshift_variant;REV__ENSG00000005187|ENST00000289416|ACSM3;REV__nc|ENSG00000005187|Q53FZ2-2|ACSM3	49.44154591367651	0.3095138337212152	6				NaN	NaN	0	NaN	3831	2755	6586
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6589	20.641	NaN	14157	30	0	5847.8	0.106	+			27786	MRSCSRKLK	9	77	562.8056614565829	1123.5967699799658	2	562.8075561523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))RSCSRKLK_	ENST00000268182.9_1_15:90984902-90986698:+|nuORF	60.97194046774394	0.20551255781574032	6				NaN	NaN	0	NaN	3832	2755	6586
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6590	20.643	NaN	9423.9	30	0	2117.4	0.106	+			48729	VTVADHIQK	9	83	505.78545600043964	NaN	0	505.7855224609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTVADHIQK_	ENSG00000181789|ENST00000314797|COPG1	77.31757898189308	0.08057531075035683	6				NaN	NaN	0	NaN	3833	2755	6586
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6591	20.644	NaN	6438.4	30	0	1319.5	0.106	+			32867	RDEAVNKIR	9	80	550.8110381543289	1099.6075233754577	2	550.81298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RDEAVNKIR_	ENSG00000138035|ENST00000447944|PNPT1;ENST00000260604.8_1_2:55870335-55906871:-|nuORF;ENST00000450418.1_1_3:4024502-4025426:-|nuORF	96.0336014099291	0.047854655524928534	6				NaN	NaN	0	NaN	3834	2755	6586
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6592	20.646	NaN	18821	30	0	3977.8	0.106			+	43699	TKKDKRMQNI	10	96	421.24111110275754	1260.7015039084727	3	421.2433776855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TKKDKRMQNI_	REV__ENSG00000153933|ENST00000284061|DGKE;REV__ENST00000571084.1_1_17:54921416-54923197:+|nuORF;REV__ENST00000576869.5_1_17:54912147-54924989:+|nuORF	43.650786325866115	0.5155049133366767	6				NaN	NaN	0	NaN	3835	2755	6586
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6593	20.648	NaN	6479.6	30	0	1206.9	0.033				-1	SPHGGALVM	9	67	442.7171201876047	883.4196874420094	2	442.7184753417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_SPHGGALVM(Oxidation (M))_	ENSG00000164880|ENST00000404767|INTS1	60.29395666154354	0.21116425950210296	6				NaN	NaN	0	NaN	3836	2755	6586
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6611	20.685	NaN	25792	30	0	4201.9	0.214	+			44136	TQATIYVHK	9	91	530.7918231574967	1059.5690933817932	2	530.7935180664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TQATIYVHK_	ENSG00000090686|ENST00000308271|USP48;nc|ENSG00000090686|Q86UV5-2|USP48;nc|ENSG00000090686|Q86UV5-5|USP48;nc|ENSG00000090686|Q86UV5-8|USP48;USP48|p.L982Ffs*9|1|0.08|ENSG00000090686|chr1:21690037-21690038|-/GG|frameshift_variant	219.56429443429514	1.5172074221325678E-08	6				NaN	NaN	0	NaN	3851	2758	6610
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6612	20.689	NaN	45384	30	0	8048.4	0.106				-1	 	0	108	507.3073669059586	1012.6001808787172	2	507.3088073730469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3852	2758	6610
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6613	20.691	NaN	33892	30	0	8935.5	0.106	+			5787	AVGTLQEAK	9	73	458.75845733694206	NaN	0	458.7585144042969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVGTLQEAK_	ENSG00000168453|ENST00000381418|HR;nc|ENSG00000168453|O43593-2|HR	168.25843898104137	0.01208957247110358	6				NaN	NaN	0	NaN	3853	2758	6610
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6614	20.693	NaN	16862	30	0	2680.6	0.106	+			44137	TQATIYVHK	9	92	354.1967765794469	1059.5685003385408	3	354.19769287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TQATIYVHK_	ENSG00000090686|ENST00000308271|USP48;nc|ENSG00000090686|Q86UV5-2|USP48;nc|ENSG00000090686|Q86UV5-5|USP48;nc|ENSG00000090686|Q86UV5-8|USP48;USP48|p.L982Ffs*9|1|0.08|ENSG00000090686|chr1:21690037-21690038|-/GG|frameshift_variant	65.46538089061403	0.16805504838372562	6				NaN	NaN	0	NaN	3854	2758	6610
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6615	20.695	NaN	14326	30	0	4883.4	0.106			+	602	ADPMELAL	8	80	438.2131972178679	874.4118415025358	2	438.2143859863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_ADPM(Oxidation (M))ELAL_	REV__tr|U7SJR1|U7SJR1_FUSNUAlpha-2-macroglobulindomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02061PE=3SV=1	52.29916861842294	0.578018602984656	6				NaN	NaN	0	NaN	3855	2758	6610
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6616	20.697	NaN	35402	30	0	13748	0.036			+	42368	TAILPMLALA	10	72	338.54058595978813	1012.5999284795644	3	338.54168701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TAILPMLALA_	REV__ENSG00000148225|ENST00000374193|WDR31;REV__ENST00000461942.5_1_9:116079031-116083765:-|nuORF;REV__nc|ENSG00000148225|Q8NA23-2|WDR31	42.86426827375447	0.522752283233888	6				NaN	NaN	0	NaN	3856	2758	6610
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6617	20.697	NaN	16337	30	0	2907.3	0.14				-1	 	0	65	326.5335460602527	976.5788087809582	3	326.5345458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3857	2758	6610
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6635	20.737	NaN	141760	30	0	108220	0.186			+	-1	VACVCGRL	8	64	439.22299921596726	876.4314454987345	2	439.22412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_VAC(Carbamidomethyl (C))VCGRL_	REV__ENST00000609937.1_1_4:141677873-141678050:+|nuORF	46.76643321282427	0.6143254112625767	6				NaN	NaN	0	NaN	3872	2761	6634
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6636	20.74	NaN	59199	30	0	22695	0.106				-1	 	0	80	425.23623515312914	848.4579173730583	2	425.23724365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3873	2761	6634
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6637	20.742	NaN	24117	30	0	8451.5	0.106			+	-1	CVGLTTCGTGK	11	88	548.7577682909564	1095.5009836487127	2	548.7601928710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_C(Carbamidomethyl (C))VGLTTCGTGK_	REV__tr|U7STW0|U7STW0_FUSNUHydroxylaminereductaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=hcpPE=3SV=1	62.107414245175825	0.30464354921554965	6				NaN	NaN	0	NaN	3874	2761	6634
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6638	20.744	NaN	12722	30	0	1329.7	0.106				-1	TLVSFCEV	8	80	477.7341913626654	953.4538297921308	2	477.7353210449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_TLVSFC(Carbamidomethyl (C))EV_	ENST00000225737.10_1_17:19844264-19845154:-|nuORF	71.37791200682192	0.3954169775488141	6				NaN	NaN	0	NaN	3875	2761	6634
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6639	20.745	NaN	19452	30	0	8004.6	0.106				-1	 	0	72	332.53709298566866	994.5894495572061	3	332.5380554199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3876	2761	6634
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6640	20.747	NaN	16241	30	0	3028.7	0.106			+	-1	GILNCSDGGI	10	78	503.2357776908076	1004.4570024484152	2	503.2370910644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_GILNC(Carbamidomethyl (C))SDGGI_	REV__ENSG00000040487|ENST00000375153|SLC66A1;REV__nc|ENSG00000040487|Q6ZP29-3|SLC66A1;REV__PQLC2|p.L194Cfs*31|1|0.13|ENSG00000040487|chr1:19326581-19326582|-/GT|frameshift_variant	58.78195531508484	0.37691818691852547	6				NaN	NaN	0	NaN	3877	2761	6634
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6641	20.749	NaN	7142.8	30	0	1189	0.033				-1	 	0	62	418.2416315535295	834.468710173859	2	418.2427062988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3878	2761	6634
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6659	20.787	NaN	28240	30	0	6688.4	0.214			+	21907	KRSRAVKQ	8	88	486.80663543605766	971.5987179389153	2	486.80780029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KRSRAVKQ_	REV__ENST00000490239.5_1_9:35616323-35616377:-|nuORF	76.7741389293348	0.3504530765139327	6				NaN	NaN	0	NaN	3893	2764	6658
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6660	20.79	NaN	34506	30	0	12372	0.106				-1	 	0	86	421.26519848559167	840.5158440379834	2	421.2661437988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3894	2764	6658
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6661	20.792	NaN	24888	30	0	2775.5	0.106			+	19726	KDTPWVGDL	9	80	515.7639189896295	1029.5132850460589	2	515.765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KDTPWVGDL_	REV__ENSG00000110713|ENST00000324932|NUP98;REV__nc|ENSG00000110713|P52948-2|NUP98;REV__nc|ENSG00000110713|P52948-3|NUP98;REV__nc|ENSG00000110713|P52948-4|NUP98;REV__nc|ENSG00000110713|P52948-6|NUP98;REV__nc|ENSG00000110713|P52948|NUP98;REV__NUP98|p.N1328Tfs*89|2|0.22|ENSG00000110713|chr11:3699159-3699159|T/-|frameshift_variant	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	3895	2764	6658
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6662	20.794	NaN	17196	30	0	6491.4	0.106				-1	 	0	59	432.2440254673392	862.4734980014784	2	432.2450866699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3896	2764	6658
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6663	20.796	NaN	8687.4	30	0	1073.2	0.106			+	27910	MTTMPGKASPV	11	70	568.2780034247786	1134.541453916357	2	568.280029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_M(Oxidation (M))TTMPGKASPV_	REV__ENST00000463465.1_1_1:43223571-43224973:-|nuORF	77.31757898189308	0.17473537675624723	6				NaN	NaN	0	NaN	3897	2764	6658
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6664	20.798	NaN	15868	30	0	2007.5	0.036	+			20890	KIQETFAQK	9	82	546.8044920893434	1091.5944312454867	2	546.80615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KIQETFAQK_	ENST00000519940.5_1_19:48735037-48741646:-|nuORF	190.62248201133156	0.00022967542297918066	6				NaN	NaN	0	NaN	3898	2764	6658
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6665	20.799	NaN	6102	30	0	681.08	0.141	+			32657	RAANNQGVKF	10	69	552.7994674961051	1103.58438205901	2	554.2937622070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RAANNQGVKF_	ENSG00000136197|ENST00000350427|C7orf25;nc|nan|Q9BPX7-2|C7orf25	21.9598887501803	0.7004979571547932	6				NaN	NaN	0	NaN	3899	2764	6658
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6683	20.837	NaN	2213900	30	0	538800	0.055	+			5534	AVAIKAMAK	9	83	451.7767103571864	901.5388677811728	2	451.7789306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVAIKAMAK_	EIF5A|p.A145P|1|0.15|ENSG00000132507|chr17:7311608-7311608|G/C|missense_variant;ENSG00000132507|ENST00000336458|EIF5A;ENSG00000253626|ENST00000520547|EIF5AL1;nc|ENSG00000132507|P63241-2|EIF5A	129.68262048586715	0.015338143639892752	6				NaN	NaN	0	NaN	3914	2767	6682
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6684	20.838	NaN	157680	30	0	27684	0.084				-1	 	0	101	509.2994499329484	1016.5843469326968	2	509.3011474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3915	2767	6682
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6685	20.84	NaN	325560	30	0	47451	0.078			+	46952	VKFCLKYF	8	128	368.86866050930104	1103.5841521281031	3	368.8699951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_VKFC(Carbamidomethyl (C))LKYF_	REV__ENST00000258180.7_1_16:85127640-85127736:+|nuORF	50.0245360154114	0.5941082100236891	6				NaN	NaN	0	NaN	3916	2767	6682
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6686	20.841	NaN	81576	30	0	30809	0.106			+	4573	ATLELPLAMLR	11	76	409.9093400157551	1226.7061906474653	3	409.9106140136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATLELPLAMLR_	REV__ENST00000343534.9_1_1:112020844-112021090:+|nuORF	36.31764250033197	0.6083289427130232	6				NaN	NaN	0	NaN	3917	2767	6682
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6687	20.843	NaN	169260	30	0	34851	0.106	+			32658	RAANNQGVKF	10	117	552.7994674961051	1103.58438205901	2	552.8019409179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RAANNQGVKF_	ENSG00000136197|ENST00000350427|C7orf25;nc|nan|Q9BPX7-2|C7orf25	84.9155231211612	0.16018353804806162	6				NaN	NaN	0	NaN	3918	2767	6682
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6688	20.845	NaN	18067	30	0	5700.8	0.106	+			21474	KNHRKKNL	8	86	346.549051149558	1036.625324048874	3	346.55010986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KNHRKKNL_	ENST00000460752.1_1_10:95429548-95430539:-|nuORF	23.04248740728303	0.7814162927298575	6				NaN	NaN	0	NaN	3919	2767	6682
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6689	20.847	NaN	12949	30	0	2800.7	0.106			+	31606	QLVPVTRGAP	10	80	519.3076627914028	1036.6007726496055	2	519.32177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QLVPVTRGAP_	REV__ENST00000397091.9_1_8:38325804-38325987:-|nuORF	56.43379154798735	0.3982744522255666	6				NaN	NaN	0	NaN	3920	2767	6682
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6690	20.848	NaN	28560	30	0	3547.7	0.106				-1	SICNLVHKQ	9	86	549.7906122305412	1097.5666715278824	2	549.793212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Carbamidomethyl (C)	_SIC(Carbamidomethyl (C))NLVHKQ_	ENSG00000168116|ENST00000370733|KIAA1586;KIAA1586|p.S537Qfs*20|1|0.31|ENSG00000168116|chr6:57054105-57054105|T/-|frameshift_variant;nc|ENSG00000168116|Q9HCI6-2|KIAA1586	56.72105179125745	0.24094814563026265	6				NaN	NaN	0	NaN	3921	2767	6682
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6691	20.85	NaN	13638	30	0	3007.7	0.038			+	32011	QRLNKTAGLNI	11	73	614.3606676172146	1226.7067823012292	2	614.3626098632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	9	Unmodified	_QRLNKTAGLNI_	REV__ENSG00000083097|ENST00000349129|DOP1A	53.59686742100583	0.38061189074210516	6				NaN	NaN	0	NaN	3922	2767	6682
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6709	20.885	NaN	38600	30	0	6550.4	0.213			+	7987	DSYRRRRSL	9	90	604.8338847507194	1207.6532165682388	2	604.8353881835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DSYRRRRSL_	REV__ENSG00000257704|ENST00000552360|INAFM1	69.6276240434122	0.14239879520340665	6				NaN	NaN	0	NaN	3937	2770	6708
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6710	20.888	NaN	38667	30	0	8212.8	0.106				-1	 	0	84	473.762669973174	945.510787013148	2	473.763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3938	2770	6708
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6711	20.89	NaN	16242	30	0	7280	0.106				-1	 	0	77	335.84607904963855	1004.5164077491156	3	335.8470458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3939	2770	6708
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6712	20.892	NaN	11617	30	0	1155.1	0.106	+			48587	VTQNGGLYK	9	82	490.2627601466474	978.5109673600948	2	490.2638854980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTQNGGLYK_	ENSG00000100596|ENST00000216484|SPTLC2	140.11223852658463	0.010427410095706195	6				NaN	NaN	0	NaN	3940	2770	6708
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6713	20.894	NaN	53745	30	0	11637	0.106				-1	 	0	102	330.52981624796314	988.5676193440895	3	330.53082275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3941	2770	6708
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6714	20.896	NaN	18075	30	0	2558.3	0.037	+			13299	GKDFNLGMPW	10	87	582.7790017890842	1163.5434506449683	2	582.7808227539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GKDFNLGMPW_	ENST00000604826.1_1_6:34158651-34158831:+|nuORF	82.30502934623384	0.17678907142465278	6				NaN	NaN	0	NaN	3942	2770	6708
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6715	20.897	NaN	6767	30	0	1769	0.141			+	29424	PCAWEHGL	8	69	456.70506178127573	911.3955706293515	2	456.70611572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PCAWEHGL_	REV__ENST00000401607.6_1_20:34214165-34218368:-|nuORF	26.79610172149135	0.7524337208463756	6				NaN	NaN	0	NaN	3943	2770	6708
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6733	20.936	NaN	723270	30	0	429950	0.12				-1	 	0	61	384.77091174774523	767.5272705622905	2	384.7725524902344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3958	2773	6732
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6734	20.938	NaN	16225	30	0	7696.3	0.106			+	12209	GARGEHGPPH	10	63	338.8334984073863	1013.4786658223588	3	338.8345031738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GARGEHGPPH_	REV__ENST00000468403.1_1_1:153751697-153752222:+|nuORF;REV__ENST00000483574.6_1_1:153751589-153752475:+|nuORF	33.921630207806714	0.6028135429846169	6				NaN	NaN	0	NaN	3959	2773	6732
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6735	20.94	NaN	37541	30	0	19207	0.106	+			34643	RVQEAVESMVK	11	89	646.3358815398017	1290.6572101464033	2	646.3377685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_RVQEAVESM(Oxidation (M))VK_	ENSG00000035141|ENST00000430566|FAM136A;ENST00000460307.1_1_2:70528513-70529143:-|nuORF;ENST00000498665.1_1_2:70527944-70529143:-|nuORF;nc|ENSG00000035141|Q96C01|FAM136A	131.4175700721456	0.0011899986011700767	6				NaN	NaN	0	NaN	3960	2773	6732
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6736	20.942	NaN	11197	30	0	1847.9	0.106			+	29479	PCRPLPMPI	9	81	341.8537433274506	NaN	0	341.8538513183594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PCRPLPMPI_	REV__HYDIN|p.V3416Gfs*64|1|0.15|ENSG00000157423|chr16:70879725-70879726|-/ACTCC|frameshift_variant	51.33545320467046	0.19748963086191895	6				NaN	NaN	0	NaN	3961	2773	6732
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6737	20.944	NaN	12868	30	0	3342.5	0.106	+			33870	RRLLYALC	8	68	336.5344378546052	NaN	0	336.53436279296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RRLLYALC_	ENSG00000185504|ENST00000327787|FAAP100	29.841539824830324	1.7418937515398478	6				NaN	NaN	0	NaN	3962	2773	6732
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6738	20.945	NaN	13263	30	0	1018.4	0.106	+			12281	GAYDGKFEK	9	82	507.7473717518714	1013.4801905705428	2	507.74835205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GAYDGKFEK_	ENSG00000196363|ENST00000358625|WDR5;WDR5|p.V217Cfs*4|5|0.4|ENSG00000196363|chr9:134154476-134154476|C/-|frameshift_variant	94.4091291819064	0.0524345700464502	6				NaN	NaN	0	NaN	3963	2773	6732
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6739	20.947	NaN	18299	30	0	4265.4	0.034				-1	 	0	79	460.76237342356865	919.5101939139373	2	460.7637023925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3964	2773	6732
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6740	20.948	NaN	30029	30	0	9743.5	0.139				-1	 	0	87	466.26277773882583	930.5110025444517	2	466.2638244628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3965	2773	6732
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6759	20.985	NaN	40225	30	0	18022	0.214				-1	 	0	96	363.2278795543764	1086.6618092633291	3	363.2290954589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3981	2776	6758
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6760	20.989	NaN	20902	30	0	7480.8	0.106				-1	 	0	84	354.5317468347296	1060.5734111043887	3	354.5328674316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	3982	2776	6758
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6761	20.991	NaN	9757.1	30	0	1261.8	0.106			+	25604	LQLFTVSVPGI	11	79	391.90329631924277	NaN	0	391.9034423828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LQLFTVSVPGI_	REV__ENST00000221566.6_1_19:2755225-2755636:-|nuORF	66.42927471994793	0.17109614838402026	6				NaN	NaN	0	NaN	3983	2776	6758
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6762	20.993	NaN	14136	30	0	1737.3	0.106	+			40484	STYATTIRDSK	11	85	621.8188853885341	1241.6232178438681	2	621.8209228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STYATTIRDSK_	ENSG00000127054|ENST00000435064|INTS11;ENST00000421495.6_1_1:1249445-1259984:-|nuORF;ENST00000470030.6_1_1:1248876-1250311:-|nuORF;ENST00000488042.6_1_1:1250056-1259988:-|nuORF;ENST00000531020.1_1_1:1249679-1250311:-|nuORF;nc|ENSG00000127054|Q5TA45-2|INTS11;nc|ENSG00000127054|Q5TA45-3|INTS11;nc|ENSG00000127054|Q5TA45-4|INTS11;nc|ENSG00000127054|Q5TA45-5|INTS11	177.56662115801413	9.795587494009728E-06	6				NaN	NaN	0	NaN	3984	2776	6758
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6763	20.995	NaN	11113	30	0	2399.8	0.106	+			6835	CIDILLEL	8	76	466.26277773882583	930.5110025444517	2	466.2642517089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_CIDILLEL_	ENSG00000066279|ENST00000367409|ASPM;nc|ENSG00000066279|Q8IZT6-2|ASPM	35.200714571348534	0.6875396545722289	6				NaN	NaN	0	NaN	3985	2776	6758
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6764	20.996	NaN	22493	30	0	1729	0.106	+			7411	DEKKTLNTL	9	85	531.2943894060763	1060.5742258789526	2	531.2964477539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DEKKTLNTL_	ENSG00000151746|ENST00000652176|BICD1;nc|ENSG00000151746|Q96G01-3|BICD1;nc|ENSG00000151746|Q96G01-4|BICD1	106.88024417677582	0.032181361622142884	6				NaN	NaN	0	NaN	3986	2776	6758
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6765	20.998	NaN	11307	30	0	3287.7	0.035				-1	STCSCAWI	8	73	492.6976887050811	983.3808244769622	2	492.69964599609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C)	_STC(Carbamidomethyl (C))SC(Carbamidomethyl (C))AWI_	L1MB4_dup8351|chr19:41723964-41725199:-|4.338323541633806|0.1814582314154843|4.58|482.0|44|1|anti-sense	42.47446043378293	0.6409579893742323	6				NaN	NaN	0	NaN	3987	2776	6758
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6783	21.036	NaN	11057	30	0	883.78	0.214	+			20400	KETEIVKKL	9	86	544.3386041718918	1086.6626554105835	2	544.3402709960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KETEIVKKL_	ENSG00000115816|ENST00000234170|CEBPZ	117.5257442709337	0.022697614825424036	6				NaN	NaN	0	NaN	4002	2779	6782
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6784	21.039	NaN	11162	30	0	1536.5	0.106			+	29932	PLYFLAPSV	9	84	503.7866820148687	NaN	0	503.7877502441406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PLYFLAPSV_	REV__ENST00000509087.1_1_5:140053844-140054778:-|nuORF	71.37791200682192	0.10092813839350395	6				NaN	NaN	0	NaN	4003	2779	6782
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6785	21.041	NaN	9218.6	30	0	3127.7	0.106			+	-1	GALVMHMIL	9	58	334.1822433050577	999.524900515373	3	334.1833801269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_GALVM(Oxidation (M))HMIL_	REV__SLC22A2|p.G370V|1|0.42|ENSG00000112499|chr6:160243742-160243742|C/A|missense_variant	29.14955571784316	0.5308295550522326	6				NaN	NaN	0	NaN	4004	2779	6782
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6786	21.043	NaN	10386	30	0	2673.9	0.106			+	43596	TIKLVFRSDVV	11	72	426.2589963444143	1275.7551596334429	3	426.2600402832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TIKLVFRSDVV_	REV__ENSG00000159899|ENST00000342694|NPR2;REV__nc|ENSG00000159899|P20594-2|NPR2	22.561587123415745	0.7531385481947795	6				NaN	NaN	0	NaN	4005	2779	6782
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6787	21.045	NaN	11851	30	0	1750	0.106	+			33717	RPGFPARAE	9	88	500.7696328465406	999.5247127598813	2	500.7712707519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RPGFPARAE_	ENST00000587807.5_1_18:54293643-54306011:-|nuORF	39.252832667884924	0.4290233611298554	6				NaN	NaN	0	NaN	4006	2779	6782
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6788	21.047	NaN	9562	30	0	4733.6	0.033			+	42253	TAARAQNR	8	61	444.2439793960975	886.473405858995	2	444.24517822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TAARAQNR_	REV__ENST00000528307.5_1_11:14535901-14541893:-|nuORF;REV__ENST00000532256.1_1_11:14541836-14541920:-|nuORF;REV__ENST00000533068.5_1_11:14541661-14541974:-|nuORF;REV__ENST00000533331.5_1_11:14535061-14541920:-|nuORF	31.954861631926434	0.7126016770032289	6				NaN	NaN	0	NaN	4007	2779	6782
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6789	21.047	NaN	6370.3	30	0	971.3	0.14			+	26873	LWKCKADK	8	72	496.27534783529853	NaN	0	496.2530822753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LWKCKADK_	REV__ENST00000529123.2_1_17:72199871-72200367:+|nuORF;REV__ENST00000530646.1_1_17:72199871-72200367:+|nuORF	45.9519527083369	1.7418937515398478	6				NaN	NaN	0	NaN	4008	2779	6782
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6807	21.087	NaN	89314	30	0	10586	0.214				-1	 	0	113	536.8016068397492	1071.5886607462983	2	536.8037719726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4023	2782	6806
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6808	21.09	NaN	12833	30	0	930.12	0.106			+	-1	GLAGEMVPI	9	79	451.73695100394656	901.4593490746931	2	451.7377624511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_GLAGEM(Oxidation (M))VPI_	REV__ANKRD35|p.R515I|1|0.36|ENSG00000198483|chr1:145873225-145873225|C/A|missense_variant	60.29395666154354	0.21116425950210296	6				NaN	NaN	0	NaN	4024	2782	6806
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6809	21.092	NaN	20728	30	0	2657.8	0.106	+			40649	SVAQTVVQK	9	78	480.278571995514	958.5425910578281	2	480.2793273925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVAQTVVQK_	ENSG00000057294|ENST00000340811|PKP2;nc|ENSG00000057294|Q99959|PKP2	181.4070731898895	0.0011547877412507563	6				NaN	NaN	0	NaN	4025	2782	6806
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6810	21.094	NaN	95793	30	0	48712	0.106				-1	 	0	91	558.8149871654124	1115.6154213976247	2	558.8169555664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4026	2782	6806
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6811	21.096	NaN	5891.9	30	0	532.22	0.106	+			4799	ATNNMNLSR	9	88	510.74769237385664	1019.4808318145133	2	510.74932861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATNNMNLSR_	ENSG00000092148|ENST00000399332|HECTD1;ENST00000556004.1_1_14:31596982-31597923:-|nuORF;HECTD1|p.F2271Lfs*13|1|0.16|ENSG00000092148|chr14:31107059-31107059|A/-|frameshift_variant;HECTD1|p.I2041Lfs*27|1|0.36|ENSG00000092148|chr14:31113133-31113133|T/-|frameshift_variant;HECTD1|p.N1559H|1|0.32|ENSG00000092148|chr14:31128696-31128696|T/G|missense_variant	51.52775601994872	0.28504342437107444	6				NaN	NaN	0	NaN	4027	2782	6806
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6812	21.098	NaN	6994.6	30	0	2103.6	0.034	+			14236	GSSSPLYSK	9	56	463.23468901077604	NaN	0	463.234619140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GSSSPLYSK_	ENSG00000166833|ENST00000349880|NAV2;NAV2|p.V2057Wfs*16|1|0.23|ENSG00000166833|chr11:20095744-20095744|G/-|frameshift_variant;nc|ENSG00000166833|Q8IVL1-10|NAV2;nc|ENSG00000166833|Q8IVL1-11|NAV2;nc|ENSG00000166833|Q8IVL1-12|NAV2;nc|ENSG00000166833|Q8IVL1-13|NAV2;nc|ENSG00000166833|Q8IVL1-2|NAV2;nc|ENSG00000166833|Q8IVL1-4|NAV2;nc|ENSG00000166833|Q8IVL1-5|NAV2;nc|ENSG00000166833|Q8IVL1-8|NAV2;nc|ENSG00000166833|Q8IVL1-9|NAV2;nc|ENSG00000166833|Q8IVL1|NAV2	47.95952297671804	0.22075498469600283	6				NaN	NaN	0	NaN	4028	2782	6806
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6813	21.098	NaN	9030.3	30	0	1486.3	0.141	+			36278	SEPKDRPSF	9	72	531.7630697391592	1061.5115865451182	2	531.76611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SEPKDRPSF_	ENSG00000129465|ENST00000216274|RIPK3;ENST00000554756.1_1_14:24805383-24807435:-|nuORF	76.7741389293348	0.11149722112137898	6				NaN	NaN	0	NaN	4029	2782	6806
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6831	21.136	NaN	44025	30	0	5566	0.207			+	42284	TADRFTITQL	10	97	583.3143915200197	1164.6142301068394	2	583.8178100585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TADRFTITQL_	REV__sp|F5HIN9|TRX2_HCMVMTriplexcapsidprotein2OS=Humancytomegalovirus(strainMerlin)OX=295027GN=TRX2PE=3SV=1;REV__sp|P16728|TRX2_HCMVATriplexcapsidprotein2OS=Humancytomegalovirus(strainAD169)OX=10360GN=TRX2PE=1SV=1	65.46538089061403	0.31613324008013116	6				NaN	NaN	0	NaN	4044	2785	6830
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6832	21.139	NaN	22579	30	0	2873.6	0.106	+			40903	SVFNHAIRH	9	78	540.7868652436858	1079.5591775541716	2	540.78857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVFNHAIRH_	ENSG00000273749|ENST00000617928|CYFIP1;KBTBD2-CYFIP1|1|fusion	109.47833844074708	0.029530294723441826	6				NaN	NaN	0	NaN	4045	2785	6830
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6833	21.141	NaN	75493	30	0	8008.1	0.106	+			18063	IIYNKDKED	9	108	569.2921936320337	1136.5698343308673	2	569.2940063476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IIYNKDKED_	tr|U7T5F8|U7T5F8_FUSNUNADkinaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=nadKPE=3SV=1	87.69643885390035	0.07135982304947239	6				NaN	NaN	0	NaN	4046	2785	6830
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6834	21.143	NaN	26714	30	0	7175.7	0.106	+			1183	AENKEIQKL	9	98	358.2043635418233	NaN	0	358.2046813964844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AENKEIQKL_	ENSG00000106541|ENST00000419304|AGR2	104.01359247289065	0.015103351932921906	6				NaN	NaN	0	NaN	4047	2785	6830
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6835	21.145	NaN	25108	30	0	2114.5	0.106				-1	MLMDFEQLQ	9	88	585.7624040146563	1169.5102550961126	2	585.7643432617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_MLM(Oxidation (M))DFEQLQ_	ENSG00000116353|ENST00000263702|MECR;ENST00000453185.5_1_1:29522511-29533334:-|nuORF;ENST00000463052.5_1_1:29528537-29543205:-|nuORF;ENST00000490529.5_1_1:29528540-29557400:-|nuORF;nc|ENSG00000116353|Q9BV79-2|MECR	63.30626980617807	0.18605348971131092	6				NaN	NaN	0	NaN	4048	2785	6830
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6836	21.146	NaN	14693	30	0	4228	0.106				-1	 	0	80	346.17742035924704	1035.5104316779411	3	346.178466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4049	2785	6830
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6837	21.148	NaN	10893	30	0	2047	0.034	+			24620	LGSDIKGNT	9	80	452.74030541912157	NaN	0	452.7402038574219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LGSDIKGNT_	ENSG00000142197|ENST00000691173|DOP1B;nc|ENSG00000142197|Q9Y3R5-2|DOP1B	101.60071028292904	0.0182107634719595	6				NaN	NaN	0	NaN	4050	2785	6830
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6855	21.184	NaN	307280	30	0	33754	0.178	+			46011	VAVLCVPSP	9	121	492.2655557213688	982.5165585095376	2	492.26678466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))VAVLC(Carbamidomethyl (C))VPSP_	ENST00000531776.1_1_11:16810636-16810909:-|nuORF	52.29916861842294	0.2778091507991977	6				NaN	NaN	0	NaN	4065	2788	6854
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6856	21.187	NaN	26964	30	0	4675.2	0.106				-1	VLELLQMLVT	10	98	587.8413965570679	1173.6682401809358	2	587.84326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_VLELLQM(Oxidation (M))LVT_	ENSG00000215262|ENST00000399881|KCNU1	56.72105179125745	0.3956618550748046	6				NaN	NaN	0	NaN	4066	2788	6854
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6857	21.189	NaN	20150	30	0	3009.3	0.106	+			19322	KAHLGTAL	8	71	405.74381373232717	809.4730745314544	2	405.74517822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KAHLGTAL_	ENSG00000186468|ENST00000296674|RPS23;RPS23|p.N39T|1|0.25|ENSG00000186468|chr5:82277741-82277741|T/G|missense_variant	167.82442114527325	0.10269699327251113	6				NaN	NaN	0	NaN	4067	2788	6854
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6858	21.191	NaN	10929	30	0	787.67	0.106	+			17754	IEQGNTKAL	9	63	487.2682160311393	972.5218791290786	2	487.26904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IEQGNTKAL_	ENSG00000178896|ENST00000316052|EXOSC4	83.6470233535746	0.08277643980271215	6				NaN	NaN	0	NaN	4068	2788	6854
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6859	21.193	NaN	151020	30	0	80203	0.106				-1	 	0	74	328.51274769184494	982.5164136757348	3	328.5137634277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4069	2788	6854
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6860	21.195	NaN	26782	30	0	7282.6	0.106	+			5199	ATTQTIMQK	9	88	511.27219959351464	NaN	0	511.27069091796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATTQTIMQK_	ENSG00000196584|ENST00000359321|XRCC2	126.24258497203832	0.0011674249988053026	6				NaN	NaN	0	NaN	4070	2788	6854
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6861	21.197	NaN	17056	30	0	2494.5	0.037				-1	 	0	91	580.2994236859473	579.2921472193473	1	580.3016357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4071	2788	6854
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6879	21.232	NaN	91707	30	0	9687.1	0.096				-1	QCCRHIVPG	9	82	535.2550342283832	1068.4955155235664	2	535.2567138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_QCC(Carbamidomethyl (C))RHIVPG_	ENSG00000180304|ENST00000326005|OAZ2;ENST00000559555.1_1_15:64983714-64992763:-|nuORF;ENST00000559665.6_1_15:64983714-64985344:-|nuORF;ENST00000560837.5_1_15:64983714-64995247:-|nuORF	42.47446043378293	0.39123495718708534	6				NaN	NaN	0	NaN	4086	2791	6878
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6880	21.233	NaN	122700	30	0	57297	0.103				-1	 	0	82	539.3285078379895	1076.642462742779	2	539.3302612304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4087	2791	6878
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6881	21.235	NaN	95506	30	0	16965	0.106			+	15617	GVKMFLAAIK	10	127	359.88785900190646	1076.6417476059194	3	359.88897705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GVKMFLAAIK_	REV__ENSG00000167037|ENST00000400358|SGSM1;REV__ENST00000473458.5_1_22:25240737-25320238:+|nuORF;REV__ENST00000480523.1_1_22:25240737-25320238:+|nuORF;REV__nc|ENSG00000167037|Q2NKQ1-3|SGSM1;REV__nc|ENSG00000167037|Q2NKQ1|SGSM1;REV__SGSM1|p.L535Pfs*6|1|0.09|ENSG00000167037|chr22:24879465-24879466|-/C|frameshift_variant	66.96192283764107	0.30252237217063654	6				NaN	NaN	0	NaN	4088	2791	6878
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6882	21.237	NaN	36530	30	0	5048.9	0.106				-1	 	0	81	420.2390250802403	838.4634972272806	2	420.2401123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4089	2791	6878
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6883	21.239	NaN	41664	30	0	16568	0.106				-1	 	0	97	357.17238593557414	1068.4953284069225	3	357.1734313964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4090	2791	6878
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6884	21.241	NaN	15301	30	0	2153.7	0.106	+			10881	FCEEFGKKY	9	83	604.2762581926676	1206.537963452135	2	604.278076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_FC(Carbamidomethyl (C))EEFGKKY_	ENSG00000170606|ENST00000304858|HSPA4;HSPA4|p.S737Afs*9|1|0.18|ENSG00000170606|chr5:133103911-133103911|A/-|frameshift_variant	74.25504064058377	0.12238981753128622	6				NaN	NaN	0	NaN	4091	2791	6878
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6885	21.242	NaN	12579	30	0	4531.1	0.106	+			20781	KIADLMQF	8	83	322.5092812568071	964.5060143706214	3	322.51019287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KIADLMQF_	ENSG00000213390|ENST00000358531|ARHGAP19;nc|ENSG00000213390|Q14CB8-2|ARHGAP19;nc|ENSG00000213390|Q14CB8-3|ARHGAP19;nc|ENSG00000213390|Q14CB8-5|ARHGAP19;nc|ENSG00000213390|Q14CB8-6|ARHGAP19;nc|ENSG00000213390|Q14CB8-7|ARHGAP19	53.351449002276354	0.5676011784961348	6				NaN	NaN	0	NaN	4092	2791	6878
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6886	21.244	NaN	34966	30	0	12609	0.035				-1	ALPLQFCV	8	94	316.5057458914366	946.4954082745098	3	316.50665283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Carbamidomethyl (C)	_ALPLQFC(Carbamidomethyl (C))V_	ENST00000487519.5_1_10:60145183-60146060:+|nuORF	33.51558372728122	0.7005509609380386	6				NaN	NaN	0	NaN	4093	2791	6878
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6904	21.282	NaN	60044	30	0	17216	0.174			+	18614	ISSKSADGENA	11	92	539.7546807018146	1077.494808470429	2	539.7564086914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ISSKSADGENA_	REV__AKNAD1|p.K314Nfs*22|1|0.2|ENSG00000162641|chr1:108851723-108851723|T/-|frameshift_variant;REV__AKNAD1|p.N719Kfs*23|1|0.16|ENSG00000162641|chr1:108823380-108823381|-/T|frameshift_variant;REV__ENSG00000162641|ENST00000370001|AKNAD1;REV__nc|ENSG00000162641|Q5T1N1-2|AKNAD1;REV__nc|ENSG00000162641|Q5T1N1-3|AKNAD1;REV__nc|ENSG00000162641|Q5T1N1-4|AKNAD1	38.753607047826485	0.5749975102143227	6				NaN	NaN	0	NaN	4108	2794	6903
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6905	21.285	NaN	21969	30	0	11946	0.106	+			34644	RVQEAVESMVK	11	93	646.3358815398017	1290.6572101464033	2	646.337158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_RVQEAVESM(Oxidation (M))VK_	ENSG00000035141|ENST00000430566|FAM136A;ENST00000460307.1_1_2:70528513-70529143:-|nuORF;ENST00000498665.1_1_2:70527944-70529143:-|nuORF;nc|ENSG00000035141|Q96C01|FAM136A	82.49433358170734	0.13157841501534762	6				NaN	NaN	0	NaN	4109	2794	6903
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6906	21.287	NaN	20870	30	0	6103.5	0.106	+			15868	GYKSGNFGNVT	11	94	572.2748913933882	1142.5352298535763	2	572.2767333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GYKSGNFGNVT_	tr|U7T4Y1|U7T4Y1_FUSNUOutermembraneproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00235PE=4SV=1	60.11826168202944	0.32239947305776	6				NaN	NaN	0	NaN	4110	2794	6903
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6907	21.289	NaN	21236	30	0	10899	0.106				-1	 	0	73	384.77091174774523	767.5272705622905	2	384.7720642089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4111	2794	6903
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6908	21.29	NaN	10964	30	0	1361.7	0.106	+			44726	TTLNSPPLKK	10	86	549.8282886461127	1097.6420243590253	2	549.829833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TTLNSPPLKK_	B2M|p.V69Wfs*34|1|0.32|ENSG00000166710|chr15:44715555-44715555|A/-|frameshift_variant	117.81106730687013	0.030421278947300796	6				NaN	NaN	0	NaN	4112	2794	6903
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6909	21.292	NaN	5674.6	30	0	566.63	0.106	+			35553	SAVSQSKEL	9	68	474.7525720842004	947.4905912352008	2	474.7533264160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SAVSQSKEL_	ENSG00000136603|ENST00000259119|SKIL;ENST00000490894.1_1_3:170102333-170102591:+|nuORF;nc|ENSG00000136603|P12757-3|SKIL;nc|ENSG00000136603|P12757-5|SKIL	56.43379154798735	0.2433427591689151	6				NaN	NaN	0	NaN	4113	2794	6903
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6910	21.294	NaN	22767	30	0	2002.1	0.035			+	38970	SSRRRVAGQ	9	89	508.7887698093854	1015.5629866855709	2	508.7902526855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSRRRVAGQ_	REV__nc|ENSG00000067842|Q16720-2|ATP2B3;REV__nc|ENSG00000067842|Q16720-3|ATP2B3;REV__nc|ENSG00000067842|Q16720-5|ATP2B3;REV__nc|ENSG00000067842|Q16720-6|ATP2B3	125.81401957644128	0.01768009863045738	6				NaN	NaN	0	NaN	4114	2794	6903
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6928	21.332	NaN	134870	30	0	36975	0.207				-1	 	0	92	458.75713105830516	915.4997091834103	2	458.75830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4129	2797	6927
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6929	21.335	NaN	15369	30	0	1713.7	0.106			+	10032	ESAAPLFPP	9	81	464.7442700826049	NaN	0	464.7453918457031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ESAAPLFPP_	REV__ENSG00000176058|ENST00000409012|TPRN;REV__nc|ENSG00000176058|Q4KMQ1-2|TPRN;REV__nc|ENSG00000176058|Q4KMQ1-3|TPRN;REV__nc|ENSG00000176058|Q4KMQ1-4|TPRN	40.5726180659479	0.27166212580479165	6				NaN	NaN	0	NaN	4130	2797	6927
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6930	21.337	NaN	13342	30	0	2661	0.106			+	1522	AGALVGRHAR	10	63	336.5344378546052	NaN	0	336.53424072265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AGALVGRHAR_	REV__ENST00000602351.5_1_19:49645338-49651464:+|nuORF	19.359975847455235	0.4201028297492154	6				NaN	NaN	0	NaN	4131	2797	6927
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6931	21.339	NaN	14672	30	0	4702.7	0.106	+			7859	DQYGMLYK	8	74	517.2366473096697	1032.4587416861393	2	517.238525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_DQYGM(Oxidation (M))LYK_	ENSG00000224470|ENST00000427980|ATXN1L	93.19546047674547	0.2677966331495483	6				NaN	NaN	0	NaN	4132	2797	6927
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6932	21.341	NaN	9710.3	30	0	1315.4	0.106			+	10940	FDTIAMSL	8	70	449.2232008979686	896.4318488627372	2	449.22442626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FDTIAMSL_	REV__ENSG00000146378|ENST00000367931|TAAR2;REV__nc|ENSG00000146378|Q9P1P5-2|TAAR2;REV__TAAR2|p.A260Lfs*5|1|0.06|ENSG00000146378|chr6:132617429-132617429|T/-|frameshift_variant;REV__TAAR2|p.F122Lfs*3|1|0.22|ENSG00000146378|chr6:132617840-132617840|A/-|frameshift_variant;REV__TAAR2|p.I232Nfs*14|1|0.37|ENSG00000146378|chr6:132617511-132617512|-/T|frameshift_variant	40.5726180659479	0.6527593143185008	6				NaN	NaN	0	NaN	4133	2797	6927
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6933	21.343	NaN	23340	30	0	10383	0.033				-1	 	0	74	437.24167122948	872.46878952576	2	437.2427062988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4134	2797	6927
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6934	21.343	NaN	11224	30	0	1477.4	0.139				-1	 	0	79	488.2756747621001	974.5367965910002	2	488.27691650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4135	2797	6927
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6952	21.38	NaN	10925	30	0	1811.2	0.214	+			21358	KMAMRKLTS	9	88	541.2964262600302	1080.5782995868603	2	541.2985229492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_KM(Oxidation (M))AMRKLTS_	ENSG00000122735|ENST00000242317|DNAI1	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	4150	2800	6951
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6953	21.384	NaN	17309	30	0	1809.5	0.106			+	19540	KCETPNQDKK	10	76	595.7956869980479	1189.5768210628958	2	595.7977294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KCETPNQDKK_	REV__ENST00000554165.1_1_14:91850766-91884010:-|nuORF	65.46538089061403	0.31613324008013116	6				NaN	NaN	0	NaN	4151	2800	6951
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6954	21.386	NaN	11269	30	0	993.11	0.106	+			43515	TGSRGHLIVQ	10	88	356.5369757387478	1066.5890978164434	3	356.5380554199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TGSRGHLIVQ_	ENSG00000204624|ENST00000294484|DISP3;nc|ENSG00000204624|Q9P2K9-2|DISP3	42.86426827375447	0.522752283233888	6				NaN	NaN	0	NaN	4152	2800	6951
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6955	21.388	NaN	11154	30	0	1973.8	0.106			+	-1	GEPMGYKVL	9	73	505.25533699587135	1008.4961210585427	2	505.25689697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_GEPM(Oxidation (M))GYKVL_	REV__ENST00000354886.6_1_14:61447871-61447979:+|nuORF	68.78682469695295	0.14603441672067394	6				NaN	NaN	0	NaN	4153	2800	6951
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6956	21.389	NaN	6129	30	0	1670	0.106			+	37170	SIWIIELSM	9	52	364.53205472401646	NaN	0	364.5318908691406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SIWIIELSM_	REV__ENST00000338733.9_1_3:186282087-186282159:-|nuORF	24.20275056022122	0.35506675290109213	6				NaN	NaN	0	NaN	4154	2800	6951
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6957	21.391	NaN	45449	30	0	6853.8	0.035				-1	 	0	96	513.7810749547521	1025.547596976304	2	513.782958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4155	2800	6951
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6958	21.392	NaN	5978.1	30	0	564.13	0.141			+	48386	VTHSFHLVK	9	72	534.3019350526406	1066.589317172081	2	534.303955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VTHSFHLVK_	REV__ENSG00000206072|ENST00000544088|SERPINB11;REV__nc|ENSG00000206072|Q96P15-2|SERPINB11;REV__SERPINB11|p.R288Pfs*5|1|0.4|ENSG00000206072|chr18:63723077-63723078|-/C|frameshift_variant	54.776311868738084	0.25715957988447635	6				NaN	NaN	0	NaN	4156	2800	6951
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6976	21.431	NaN	136210	30	0	26971	0.19			+	29079	NTLMRQMIQ	9	90	575.7886587368105	1149.5627645404209	2	575.7907104492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_NTLMRQM(Oxidation (M))IQ_	REV__TMEFF2|p.I184Tfs*72|1|0.06|ENSG00000144339|chr2:191999194-191999195|-/GG|frameshift_variant	93.19546047674547	0.05585629608842056	6				NaN	NaN	0	NaN	4171	2803	6975
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6977	21.434	NaN	42245	30	0	4484.9	0.106			+	10811	FAMKLLQFT	9	106	372.2037705708344	1113.5894823127032	3	372.20501708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_FAM(Oxidation (M))KLLQFT_	REV__ENSG00000100241|ENST00000380817|SBF1;REV__ENST00000444527.2_1_8:56364433-56364982:-|nuORF;REV__nc|ENSG00000100241|O95248-4|SBF1;REV__nc|ENSG00000100241|O95248|SBF1;REV__SBF1|p.S1077Afs*28|3|0.34|ENSG00000100241|chr22:50460327-50460327|G/-|frameshift_variant;REV__SBF1|p.S1077Qfs*11|2|0.34|ENSG00000100241|chr22:50460326-50460327|-/G|frameshift_variant	44.377184641726394	0.36891676396732553	6				NaN	NaN	0	NaN	4172	2803	6975
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6978	21.437	NaN	9994.2	30	0	1387.9	0.106	+			46411	VENSRLAAE	9	68	494.75709495214176	987.4996369710835	2	494.7584533691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VENSRLAAE_	ENSG00000130396|ENST00000683244|AFDN;nc|ENSG00000130396|P55196-1|AFDN;nc|ENSG00000130396|P55196-2|AFDN;nc|ENSG00000130396|P55196-3|AFDN;nc|ENSG00000130396|P55196-5|AFDN;nc|ENSG00000130396|P55196-6|AFDN;nc|ENSG00000130396|P55196|AFDN	56.72105179125745	0.24094814563026265	6				NaN	NaN	0	NaN	4173	2803	6975
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6979	21.438	NaN	11735	30	0	3337.4	0.106				-1	 	0	74	386.71789179152927	771.4212306498586	2	386.71923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4174	2803	6975
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6980	21.44	NaN	6446.6	30	0	649.39	0.106	+			31550	QLLSGAHWMDQ	11	81	643.3068493276731	NaN	0	643.3377075195312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QLLSGAHWMDQ_	CON__Q3ZBD7;ENSG00000105220|ENST00000356487|GPI;GPI|p.E382Sfs*20|1|0.52|ENSG00000105220|chr19:34396377-34396377|G/-|frameshift_variant;nc|ENSG00000105220|P06744-2|GPI	49.536043120802724	0.3186510426945788	6				NaN	NaN	0	NaN	4175	2803	6975
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6981	21.442	NaN	16013	30	0	1476.3	0.106	+			16252	HEEKVFRAV	9	79	557.80270784894	1113.59086276468	2	557.8041381835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HEEKVFRAV_	ENSG00000095139|ENST00000264028|ARCN1;nc|ENSG00000095139|P48444-2|ARCN1	150.36159442982594	0.006784847064083231	6				NaN	NaN	0	NaN	4176	2803	6975
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	6982	21.444	NaN	22880	30	0	7435.5	0.037				-1	 	0	93	373.8791661561237	1118.6156690685712	3	373.88037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4177	2803	6975
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7000	21.481	NaN	11570	30	0	1140.4	0.214	+			26070	LSLSCKKER	9	86	532.2986797490966	1062.582806564993	2	532.2996215820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSLSCKKER_	ENSG00000222038|ENST00000409602|POTEJ	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	4192	2806	6999
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7001	21.485	NaN	30098	30	0	5692.6	0.106				-1	 	0	72	486.8067021568453	971.5988513804906	2	486.8080139160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4193	2806	6999
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7002	21.487	NaN	31101	30	0	11277	0.106				-1	 	0	88	437.7518586664062	873.4891643996124	2	437.75299072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4194	2806	6999
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7003	21.489	NaN	13201	30	0	2418.8	0.106	+			31387	QKIHRQIE	8	78	526.3044561433854	1050.5943593535708	2	526.3065795898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QKIHRQIE_	DSP|p.R676H|1|0.38|ENSG00000096696|chr6:7571965-7571965|G/A|missense_variant	42.396135135203025	0.6414440140393314	6				NaN	NaN	0	NaN	4195	2806	6999
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7004	21.491	NaN	55887	30	0	11756	0.106				-1	CAHSFIQSTI	10	90	582.2791186569494	1162.5436843806988	2	582.2810668945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_C(Carbamidomethyl (C))AHSFIQSTI_	ENST00000553961.1_1_14:69446487-69454135:+|nuORF	85.16082228582465	0.15877915086237185	6				NaN	NaN	0	NaN	4196	2806	6999
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7005	21.492	NaN	12127	30	0	1569.3	0.035	+			40400	STVEKIAMK	9	73	503.7866820148687	NaN	0	503.7877502441406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STVEKIAMK_	ENSG00000129657|ENST00000436233|SEC14L1;nc|ENSG00000129657|Q92503-2|SEC14L1;nc|ENSG00000129657|Q92503-3|SEC14L1;SEC14L1|p.G159Efs*12|1|0.17|ENSG00000129657|chr17:77193544-77193544|A/-|frameshift_variant	75.04331003522576	0.0883683072398826	6				NaN	NaN	0	NaN	4197	2806	6999
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7006	21.493	NaN	10752	30	0	2051.1	0.142			+	-1	SQCKCSLKCQ	10	81	592.764585331719	1183.514617730238	2	592.7667846679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_SQC(Carbamidomethyl (C))KCSLKCQ_	REV__ZNF141|p.A149Lfs*9|1|0.04|ENSG00000131127|chr4:372881-372882|-/TTATCAT|frameshift_variant	66.96192283764107	0.30252237217063654	6				NaN	NaN	0	NaN	4198	2806	6999
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7024	21.533	NaN	254890	30	0	46695	0.205				-1	 	0	122	551.824694417954	1101.634835902708	2	551.8271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4213	2809	7023
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7025	21.536	NaN	79027	30	0	16587	0.106			+	31955	QQRRNGSIEQ	10	99	608.3127690772831	1214.610985221366	2	608.3145141601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QQRRNGSIEQ_	REV__ENSG00000178104|ENST00000695795|PDE4DIP;REV__nc|ENSG00000178104|Q5VU43-13|PDE4DIP;REV__nc|ENSG00000178104|Q5VU43-2|PDE4DIP;REV__nc|ENSG00000178104|Q5VU43-3|PDE4DIP;REV__nc|ENSG00000178104|Q5VU43-4|PDE4DIP;REV__nc|ENSG00000178104|Q5VU43-6|PDE4DIP;REV__nc|ENSG00000178104|Q5VU43-7|PDE4DIP;REV__nc|ENSG00000178104|Q5VU43|PDE4DIP;REV__PDE4DIP|p.E1085Ffs*6|1|0.06|ENSG00000178104|chr1:149001704-149001705|-/GTTCC|frameshift_variant	87.69643885390035	0.14426223466775756	6				NaN	NaN	0	NaN	4214	2809	7023
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7026	21.538	NaN	12481	30	0	1755	0.106			+	26045	LSLKIQPNT	9	77	507.30362638084	NaN	0	507.3032531738281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSLKIQPNT_	REV__ENSG00000135773|ENST00000271971|CAPN9;REV__nc|ENSG00000135773|O14815-2|CAPN9	107.00750918261382	0.012399597248013027	6				NaN	NaN	0	NaN	4215	2809	7023
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7027	21.54	NaN	13806	30	0	3819.3	0.106			+	10250	ETKVCERITQ	10	69	421.8834794114199	NaN	0	421.88348388671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_ETKVC(Carbamidomethyl (C))ERITQ_	REV__ENSG00000060656|ENST00000373779|PTPRU;REV__nc|ENSG00000060656|Q92729-3|PTPRU;REV__nc|ENSG00000060656|Q92729-4|PTPRU;REV__nc|ENSG00000060656|Q92729|PTPRU;REV__PTPRU|p.G852Afs*35|1|0.26|ENSG00000060656|chr1:29303898-29303898|G/-|frameshift_variant	42.33807565288922	0.3540422799631949	6				NaN	NaN	0	NaN	4216	2809	7023
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7028	21.542	NaN	16915	30	0	2162.9	0.106				-1	AEMKSFTLI	9	95	352.51971421449684	1054.5373132436905	3	352.5208435058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_AEM(Oxidation (M))KSFTLI_	ENST00000483804.5_1_1:161179060-161183980:+|nuORF	36.446750945000026	0.4619375763483977	6				NaN	NaN	0	NaN	4217	2809	7023
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7029	21.544	NaN	8925.2	30	0	1268.9	0.037	+			3666	ASYMGKENLK	10	73	570.7880719518058	1139.5615909704115	2	570.7899169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASYMGKENLK_	ENSG00000054654|ENST00000555002|SYNE2;ENST00000557005.1_1_14:64469755-64489638:+|nuORF;nc|ENSG00000054654|Q8WXH0|SYNE2;SYNE2|p.A5240Qfs*5|1|0.07|ENSG00000054654|chr14:64152639-64152639|G/-|frameshift_variant;SYNE2|p.D3074Ffs*8|1|0.07|ENSG00000054654|chr14:64053132-64053133|-/TTTCTTTTTCAAATACTTG|frameshift_variant;SYNE2|p.F2563Ifs*28|1|0.34|ENSG00000054654|chr14:64051593-64051594|-/A|frameshift_variant;SYNE2|p.F2840Lfs*3|1|0.38|ENSG00000054654|chr14:64052427-64052427|T/-|frameshift_variant;SYNE2|p.F4992Lfs*13|1|0.39|ENSG00000054654|chr14:64140067-64140067|T/-|frameshift_variant;SYNE2|p.L5308Ifs*18|1|0.12|ENSG00000054654|chr14:64158750-64158751|GG/-|frameshift_variant;SYNE2|p.M1669Wfs*6|1|0.36|ENSG00000054654|chr14:64017707-64017707|A/-|frameshift_variant;SYNE2|p.N1656Mfs*19|1|0.18|ENSG00000054654|chr14:64017669-64017669|A/-|frameshift_variant;SYNE2|p.S1830Kfs*9|1|0.34|ENSG00000054654|chr14:64021985-64021986|-/A|frameshift_variant;SYNE2|p.S6651Rfs*83|1|0.29|ENSG00000054654|chr14:64220596-64220597|-/G|frameshift_variant	77.53327743719008	0.21577387331637743	6				NaN	NaN	0	NaN	4218	2809	7023
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7030	21.544	NaN	9551	30	0	1436.9	0.141				-1	 	0	79	565.7810041799855	1129.547455426771	2	565.7827758789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4219	2809	7023
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7048	21.581	NaN	78874	30	0	13963	0.167				-1	 	0	93	481.7962533176097	961.5779537020194	2	481.7973327636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4234	2812	7047
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7049	21.584	NaN	16188	30	0	6479.9	0.106				-1	 	0	65	397.722628259835	793.43070358647	2	397.7238464355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4235	2812	7047
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7050	21.586	NaN	14245	30	0	1568.4	0.106				-1	 	0	75	416.21267973042023	830.4108065276405	2	416.2138366699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4236	2812	7047
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7051	21.588	NaN	34215	30	0	3962.8	0.106			+	-1	LCFTSYQY	8	86	541.2369956041434	1080.4594382750868	2	541.2385864257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_LC(Carbamidomethyl (C))FTSYQY_	REV__ENST00000549179.5_1_12:49761351-49854587:+|nuORF;REV__ENST00000549538.5_2_12:49760692-49765072:+|nuORF	63.30626980617807	0.4690498839812213	6				NaN	NaN	0	NaN	4237	2812	7047
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7052	21.589	NaN	13787	30	0	6444.7	0.106				-1	YLHQEMQNSKE	11	79	711.8197273875035	1421.6249018418068	2	711.821533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_YLHQEM(Oxidation (M))QNSKE_	ENSG00000121446|ENST00000294854|RGSL1;nc|ENSG00000121446|A5PLK6-2|RGSL1;nc|ENSG00000121446|A5PLK6-3|RGSL1;nc|ENSG00000121446|A5PLK6-4|RGSL1;nc|ENSG00000121446|A5PLK6-5|RGSL1	41.42661286455405	0.5384226294179143	6				NaN	NaN	0	NaN	4238	2812	7047
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7053	21.591	NaN	10237	30	0	2395.2	0.106				-1	 	0	69	411.72017785362374	821.4258027740475	2	411.7212829589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4239	2812	7047
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7054	21.593	NaN	5862.9	30	0	790.94	0.035				-1	 	0	74	493.28608909426725	492.27881262766726	1	493.2875671386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4240	2812	7047
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7072	21.63	NaN	18184	30	0	3471.3	0.214	+			26338	LSYAWEPRC	9	77	562.7624531532483	1123.5103533732965	2	562.7648315429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSYAWEPRC_	RASGRP4|p.R429W|1|0.22|ENSG00000171777|chr19:38413420-38413420|G/A|missense_variant	94.00642277110589	0.05356993013874309	6				NaN	NaN	0	NaN	4255	2815	7071
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7073	21.633	NaN	15829	30	0	1994.5	0.106			+	43465	TGNRHGHGR	9	82	496.24984306889814	990.4851332045963	2	496.2512512207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TGNRHGHGR_	REV__ENSG00000110169|ENST00000265983|HPX	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	4256	2815	7071
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7074	21.635	NaN	7219.1	30	0	790.61	0.106	+			18161	ILQIMTLVV	9	76	515.3228123465531	1028.631071759906	2	515.324462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ILQIMTLVV_	ENST00000370513.9_2_1:89206944-89225970:+|nuORF	56.72105179125745	0.24094814563026265	6				NaN	NaN	0	NaN	4257	2815	7071
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7075	21.637	NaN	5169.4	30	0	551.76	0.106	+			21990	KSFDEQNVPK	10	76	596.3021987996306	1190.589844666061	2	596.3040161132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KSFDEQNVPK_	ENSG00000197321|ENST00000355867|SVIL;nc|ENSG00000197321|O95425-2|SVIL;nc|ENSG00000197321|O95425-3|SVIL;nc|ENSG00000197321|O95425-4|SVIL;SVIL|p.M1863Dfs*18|1|0.28|ENSG00000197321|chr10:29471186-29471187|-/C|frameshift_variant;SVIL|p.M1863Wfs*44|8|0.39|ENSG00000197321|chr10:29471187-29471187|C/-|frameshift_variant;SVIL|p.N2095Kfs*36|1|0.25|ENSG00000197321|chr10:29462394-29462395|-/T|frameshift_variant	72.2432373244024	0.2589930451692646	6				NaN	NaN	0	NaN	4258	2815	7071
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7076	21.639	NaN	11956	30	0	7333.7	0.106				-1	 	0	68	406.22333219209315	810.4321114509863	2	406.2246398925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4259	2815	7071
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7077	21.641	NaN	20698	30	0	11977	0.034			+	27301	MGSHGLWI	8	78	471.72862482803123	941.4426967228625	2	471.7297058105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))MGSHGLWI_	REV__ENST00000358303.8_1_7:129680864-129680897:-|nuORF	52.29916861842294	0.578018602984656	6				NaN	NaN	0	NaN	4260	2815	7071
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7078	21.641	NaN	22971	30	0	4132.8	0.143	+			25868	LSFLKNKQ	8	88	326.5307642410144	NaN	0	326.5307922363281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSFLKNKQ_	ENSG00000125351|ENST00000276201|UPF3B;ENST00000478840.1_1_X:118974578-118977244:-|nuORF;nc|ENSG00000125351|Q9BZI7-2|UPF3B	42.47446043378293	1.7418937515398478	6				NaN	NaN	0	NaN	4261	2815	7071
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7096	21.681	NaN	34978	30	0	7665.1	0.207				-1	 	0	82	555.8190779145357	1109.6236028958713	2	555.821044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4276	2818	7095
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7097	21.684	NaN	15620	30	0	1529.8	0.106	+			22076	KSLELRKCE	9	81	553.3033709431019	1104.5921889530036	2	553.3057861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KSLELRKCE_	ENSG00000139438|ENST00000538780|FAM222A	69.6276240434122	0.14239879520340665	6				NaN	NaN	0	NaN	4277	2818	7095
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7098	21.686	NaN	47752	30	0	4258.4	0.106			+	43626	TINRKMIEM	9	102	576.2989409193032	1150.5833289054062	2	576.3004760742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_TINRKMIEM(Oxidation (M))_	REV__PRKAR2B|p.A397T|2|0.35|ENSG00000005249|chr7:107159514-107159514|G/A|missense_variant	82.24051045832904	0.08786059719216216	6				NaN	NaN	0	NaN	4278	2818	7095
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7099	21.688	NaN	12759	30	0	5189.1	0.106				-1	 	0	61	323.20054697534744	644.3865410174949	2	323.2015380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4279	2818	7095
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7100	21.69	NaN	16866	30	0	1780.9	0.106			+	-1	KIMFLALE	8	95	490.7781963240839	979.5418397149679	2	490.77960205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_KIM(Oxidation (M))FLALE_	REV__ENSG00000164930|ENST00000358755|FZD6;REV__ENST00000521195.1_1_8:104320096-104343734:+|nuORF;REV__nc|ENSG00000164930|O60353-2|FZD6	47.91560031466742	0.6071945918984287	6				NaN	NaN	0	NaN	4280	2818	7095
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7101	21.692	NaN	12602	30	0	4710.2	0.036			+	51489	YVKLPGKIK	9	88	349.2304804618344	1044.6696119857033	3	349.2316589355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YVKLPGKIK_	REV__ENST00000409682.7_1_2:162267931-162268081:+|nuORF	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	4281	2818	7095
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7102	21.692	NaN	5378.5	30	0	442.2	0.139				-1	 	0	68	479.78086514362934	957.5471773540587	2	479.78192138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4282	2818	7095
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7120	21.732	NaN	18362	30	0	2904.8	0.214	+			19286	KAFQRRRR	8	85	559.3440814440605	1116.673609954921	2	559.3460083007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAFQRRRR_	ENSG00000198887|ENST00000361138|SMC5	68.484700416344	0.4195245774506064	6				NaN	NaN	0	NaN	4297	2821	7119
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7121	21.735	NaN	13445	30	0	3686.5	0.106	+			32042	QRRVLRNL	8	71	352.2243719891281	1053.6512865675843	3	352.22540283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QRRVLRNL_	ENSG00000183856|ENST00000361170|IQGAP3	25.450171626174864	0.7628259754767981	6				NaN	NaN	0	NaN	4298	2821	7119
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7122	21.737	NaN	8226.1	30	0	694.83	0.106				-1	 	0	80	442.2521692869601	882.4897856407202	2	442.2532043457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4299	2821	7119
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7123	21.739	NaN	10479	30	0	1760.8	0.106	+			43003	TEKLMKEKL	9	88	373.8850376573379	1118.6332835722137	3	373.88604736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TEKLMKEKL_	AKAP9|p.Q3083Nfs*28|1|0.15|ENSG00000127914|chr7:92089389-92089390|-/TGAATATCAAGCAGCTATGGAATGCC|frameshift_variant;ENSG00000127914|ENST00000356239|AKAP9;nc|ENSG00000127914|Q99996-1|AKAP9;nc|ENSG00000127914|Q99996-3|AKAP9;nc|ENSG00000127914|Q99996-5|AKAP9;nc|ENSG00000127914|Q99996-6|AKAP9	40.05817265558897	0.419577045485086	6				NaN	NaN	0	NaN	4300	2821	7119
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7124	21.741	NaN	42405	30	0	14172	0.106			+	-1	SKCLRKIDKT	10	96	416.9078344503199	1247.7016739511598	3	416.90911865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_SKC(Carbamidomethyl (C))LRKIDKT_	REV__ENSG00000183690|ENST00000420999|EFHC2;REV__ENST00000343571.3_1_X:44008043-44084947:-|nuORF;REV__nc|ENSG00000183690|Q5JST6-2|EFHC2	61.76455937419982	0.3497917639301274	6				NaN	NaN	0	NaN	4301	2821	7119
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7125	21.743	NaN	11614	30	0	1771.1	0.035			+	3195	ASKKIEGKF	9	68	336.5344378546052	NaN	0	336.5342712402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASKKIEGKF_	REV__tr|U7SUA5|U7SUA5_FUSNUOligopeptidaseFOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01160PE=3SV=1	23.04248740728303	0.3589936788096251	6				NaN	NaN	0	NaN	4302	2821	7119
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7126	21.743	NaN	11431	30	0	3556	0.14			+	-1	LGVCIISLI	9	81	329.8685620361796	986.5838567087387	3	329.8695983886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_LGVC(Carbamidomethyl (C))IISLI_	REV__ENSG00000132824|ENST00000342374|SERINC3;REV__nc|ENSG00000132824|Q13530-2|SERINC3	34.172542307311794	0.4838870758800184	6				NaN	NaN	0	NaN	4303	2821	7119
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7144	21.783	NaN	31023	30	0	4196.1	0.214			+	9920	EQSQIQKL	8	94	487.26907957480563	NaN	0	487.2690124511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EQSQIQKL_	REV__ENST00000557691.1_1_14:71277363-71281997:+|nuORF	131.03138772384656	1.7418937515398478	6				NaN	NaN	0	NaN	4318	2824	7143
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7145	21.786	NaN	12124	30	0	776.32	0.106			+	37195	SKCLRKIDKT	10	90	624.858201544371	1247.701850155542	2	624.8602294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SKC(Carbamidomethyl (C))LRKIDKT_	REV__ENSG00000183690|ENST00000420999|EFHC2;REV__ENST00000343571.3_1_X:44008043-44084947:-|nuORF;REV__nc|ENSG00000183690|Q5JST6-2|EFHC2	87.69643885390035	0.14426223466775756	6				NaN	NaN	0	NaN	4319	2824	7143
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7146	21.789	NaN	9663.2	30	0	831.5	0.106	+			34040	RSLRLQQE	8	81	515.2922715554747	1028.5699901777493	2	515.293701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RSLRLQQE_	ENSG00000161664|ENST00000293414|ASB16	55.50420428727701	0.5462892107279674	6				NaN	NaN	0	NaN	4320	2824	7143
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7147	21.79	NaN	10191	30	0	2462	0.106			+	7923	DSGAARRDR	9	73	502.2546012418519	1002.4946495505038	2	502.256103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DSGAARRDR_	REV__COL6A3|p.A2956Lfs*45|1|0.33|ENSG00000163359|chr2:237336234-237336234|C/-|frameshift_variant;REV__COL6A3|p.A2957Lfs*44|1|0.33|ENSG00000163359|chr2:237336232-237336232|A/-|frameshift_variant;REV__COL6A3|p.G3016Vfs*19|1|0.34|ENSG00000163359|chr2:237334810-237334810|G/-|frameshift_variant;REV__ENSG00000163359|ENST00000295550|COL6A3;REV__ENST00000491769.1_1_2:238233419-238250825:-|nuORF;REV__nc|ENSG00000163359|P12111-2|COL6A3;REV__nc|ENSG00000163359|P12111-4|COL6A3	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	4321	2824	7143
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7148	21.792	NaN	13081	30	0	2845.4	0.106	+			42350	TAHHLGLLK	9	86	330.5343847567751	NaN	0	330.5343933105469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TAHHLGLLK_	ENSG00000185721|ENST00000331457|DRG1;ENST00000433341.5_1_22:31795606-31819296:+|nuORF	60.97194046774394	0.14517358171632622	6				NaN	NaN	0	NaN	4322	2824	7143
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7149	21.794	NaN	9195.5	30	0	1866.4	0.034				-1	 	0	62	476.7102280085341	951.4059030838682	2	476.7114562988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4323	2824	7143
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7150	21.795	NaN	14680	30	0	5048.3	0.138				-1	 	0	71	384.77091174774523	767.5272705622905	2	384.77203369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4324	2824	7143
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7168	21.834	NaN	817510	30	0	158980	0.069				-1	 	0	78	453.2545913676794	904.4946298021588	2	453.2558898925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4339	2827	7167
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7169	21.835	NaN	383110	30	0	49128	0.106				-1	 	0	105	529.3198989357865	1056.6252449383728	2	529.3217163085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4340	2827	7167
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7170	21.837	NaN	32904	30	0	4638.6	0.106				-1	 	0	90	535.2781186217128	1068.5416843102255	2	535.2799072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4341	2827	7167
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7171	21.839	NaN	14339	30	0	5548.7	0.106				-1	GLCESLAVL	9	71	481.25650875374043	960.4984645742809	2	481.25079345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_GLC(Carbamidomethyl (C))ESLAVL_	ENSG00000108786|ENST00000585807|HSD17B1	74.51659920185547	0.12125883671239121	6				NaN	NaN	0	NaN	4342	2827	7167
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7172	21.841	NaN	19634	30	0	3907.7	0.106				-1	 	0	88	443.2089548328506	884.4033567325013	2	443.2100830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4343	2827	7167
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7173	21.842	NaN	9657.1	30	0	702.66	0.106	+			31931	QQPSLQLSQ	9	86	514.773324635774	1027.5320963383479	2	516.2720947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QQPSLQLSQ_	ENSG00000166436|ENST00000646038|TRIM66;ENST00000481014.6_1_11:8646046-8673385:-|nuORF;nc|ENSG00000166436|O15016-2|TRIM66;nc|ENSG00000166436|O15016-3|TRIM66;nc|ENSG00000166436|O15016|TRIM66;TRIM66|p.P964Qfs*4|1|0.37|ENSG00000166436|chr11:8621158-8621158|G/-|frameshift_variant;TRIM66|p.Q550Afs*26|1|0.4|ENSG00000166436|chr11:8640292-8640293|-/C|frameshift_variant	44.377184641726394	0.36891676396732553	6				NaN	NaN	0	NaN	4344	2827	7167
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7174	21.844	NaN	6909.7	30	0	744.2	0.106	+			3889	ATAQFKINK	9	76	510.7936600281085	1019.572767123017	2	510.79547119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATAQFKINK_	ENSG00000143228|ENST00000271452|NUF2;NUF2|p.I401Nfs*2|1|0.3|ENSG00000143228|chr1:163349015-163349016|-/A|frameshift_variant	70.8162118820467	0.13725933411854815	6				NaN	NaN	0	NaN	4345	2827	7167
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7175	21.846	NaN	31888	30	0	14229	0.038	+			21188	KLASSIAFTYN	11	78	607.8233762006117	1213.6321994680234	2	607.8251342773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_KLASSIAFTYN_	ENSG00000172915|ENST00000379939|NBEA;ENST00000497540.1_1_13:35644101-35644990:+|nuORF;NBEA|p.N1121Kfs*2|1|0.35|ENSG00000172915|chr13:35159525-35159526|-/A|frameshift_variant;NBEA|p.N1121Mfs*9|2|0.36|ENSG00000172915|chr13:35159526-35159526|A/-|frameshift_variant;NBEA|p.N718Kfs*4|1|0.12|ENSG00000172915|chr13:35118380-35118381|-/A|frameshift_variant;NBEA|p.N854Kfs*18|1|0.22|ENSG00000172915|chr13:35156110-35156111|-/A|frameshift_variant;NBEA|p.V2250Lfs*10|1|0.36|ENSG00000172915|chr13:35550967-35550967|A/-|frameshift_variant;nc|ENSG00000172915|Q8NFP9|NBEA	85.86182877749512	0.11571513784830015	6				NaN	NaN	0	NaN	4346	2827	7167
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7194	21.88	NaN	48409	30	0	5358.5	0.214			+	50930	YGSSPPPSR	9	102	474.2328111965772	946.4510694599544	2	474.2339172363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YGSSPPPSR_	REV__ENSG00000174963|ENST00000383075|ZIC4;REV__ENST00000464502.5_1_3:147108719-147111514:-|nuORF;REV__ENST00000472749.6_1_3:147108719-147109862:-|nuORF;REV__ENST00000475502.1_1_3:147108719-147109820:-|nuORF;REV__ENST00000493664.5_1_3:147108719-147114575:-|nuORF;REV__nc|ENSG00000174963|Q8N9L1-3|ZIC4;REV__nc|ENSG00000174963|Q8N9L1-4|ZIC4;REV__nc|ENSG00000174963|Q8N9L1-5|ZIC4	53.351449002276354	0.2690372970092375	6				NaN	NaN	0	NaN	4362	2830	7193
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7195	21.884	NaN	12686	30	0	1192.7	0.106			+	19599	KDESMRFLVA	10	81	598.3097660409528	1194.6049791487055	2	598.311767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KDESMRFLVA_	REV__ENSG00000168036|ENST00000349496|CTNNB1;REV__ENST00000465552.1_1_3:41277978-41278230:+|nuORF;REV__ENST00000485265.1_1_3:41277322-41278230:+|nuORF	75.04331003522576	0.23611669241777622	6				NaN	NaN	0	NaN	4363	2830	7193
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7196	21.886	NaN	12913	30	0	3886.7	0.106				-1	 	0	78	444.2494481510864	886.4843433689729	2	444.25048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4364	2830	7193
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7197	21.888	NaN	42143	30	0	8789.5	0.106			+	36915	SIIMLTLAGI	10	106	344.54394073326284	1030.6099927999885	3	344.5450439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SIIMLTLAGI_	REV__ENSG00000198743|ENST00000381151|SLC5A3	44.116797842482775	0.5112108506279902	6				NaN	NaN	0	NaN	4365	2830	7193
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7198	21.89	NaN	20715	30	0	8073.9	0.106	+			693	AEALSHHCL	9	84	490.7360504440135	979.457547954827	2	490.73712158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEALSHHCL_	ENST00000558890.5_1_15:99872165-99903471:+|nuORF	37.15910966729921	0.4535818937225704	6				NaN	NaN	0	NaN	4366	2830	7193
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7199	21.891	NaN	23732	30	0	5716	0.106	+			47339	VPDQNSKQL	9	80	514.773324635774	1027.5320963383479	2	515.7798461914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VPDQNSKQL_	ENSG00000118482|ENST00000262043|PHF3;nc|ENSG00000118482|Q92576-2|PHF3;PHF3|p.F1399Lfs*30|1|0.31|ENSG00000118482|chr6:63711780-63711780|T/-|frameshift_variant;PHF3|p.I876Yfs*26|1|0.08|ENSG00000118482|chr6:63694705-63694705|A/-|frameshift_variant;PHF3|p.K1984Vfs*10|2|0.05|ENSG00000118482|chr6:63713536-63713537|-/TGTGAATCACTAT|frameshift_variant;PHF3|p.N1400*|1|0.17|ENSG00000118482|chr6:63711779-63711780|-/T|frameshift_variant;PHF3|p.N993Tfs*9|1|0.33|ENSG00000118482|chr6:63698597-63698597|A/-|frameshift_variant;PHF3|p.R971Sfs*6|1|0.27|ENSG00000118482|chr6:63698526-63698527|-/T|frameshift_variant;PHF3|p.V1137*|1|0.32|ENSG00000118482|chr6:63706063-63706063|A/-|frameshift_variant	49.44154591367651	0.3095138337212152	6				NaN	NaN	0	NaN	4367	2830	7193
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7200	21.893	NaN	5047.2	30	0	661.49	0.033	+			9170	EGPPFPLI	8	61	435.24306554645926	868.4715781597185	2	435.24462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EGPPFPLI_	ENST00000548872.5_1_12:50222327-50222528:+|nuORF	26.79610172149135	0.7524337208463756	6				NaN	NaN	0	NaN	4368	2830	7193
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7218	21.93	NaN	65647	30	0	6564.8	0.214	+			4410	ATIDGSVNPK	10	106	501.26555089627914	1000.5165488593583	2	501.2666320800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATIDGSVNPK_	ENSG00000116830|ENST00000369466|TTF2;ENST00000463696.1_1_1:117637951-117640053:+|nuORF;ENST00000492682.5_1_1:117635418-117640830:+|nuORF;TTF2|p.K1134Efs*22|1|0.25|ENSG00000116830|chr1:117101426-117101427|-/A|frameshift_variant	128.60217544463768	0.01518043149187549	6				NaN	NaN	0	NaN	4383	2833	7217
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7219	21.933	NaN	25058	30	0	3117.6	0.106			+	6931	CNSRWVGVL	9	81	517.2659222888642	1032.5172916445283	2	517.2675170898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_CNSRWVGVL_	REV__ENST00000593110.5_1_17:57963566-57970134:-|nuORF	60.97194046774394	0.20551255781574032	6				NaN	NaN	0	NaN	4384	2833	7217
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7220	21.935	NaN	7155.2	30	0	650.68	0.106				-1	 	0	77	497.7803825631275	993.546212193055	2	497.7819519042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4385	2833	7217
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7221	21.937	NaN	13627	30	0	2345.1	0.106	+			21223	KLGGAAVL	8	67	364.7381984532651	NaN	0	364.73822021484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KLGGAAVL_	ENSG00000081913|ENST00000262719|PHLPP1;nc|ENSG00000081913|O60346-2|PHLPP1	21.70233525837049	1.7418937515398478	6				NaN	NaN	0	NaN	4386	2833	7217
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7222	21.939	NaN	16338	30	0	1256	0.106				-1	IEKLDITCI	9	94	552.804146459699	1103.593739986198	2	552.8075561523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_IEKLDITC(Carbamidomethyl (C))I_	tr|U7SUM1|U7SUM1_FUSNUFlgNproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01224PE=4SV=1	110.11987700582712	0.028875675806141952	6				NaN	NaN	0	NaN	4387	2833	7217
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7223	21.941	NaN	15310	30	0	2621.2	0.037				-1	INKMIDLIE	9	84	368.8703169033489	NaN	0	368.8734130859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_INKM(Oxidation (M))IDLIE_	tr|U7T344|U7T344_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00383PE=4SV=1	52.936696900407355	0.1864545979552969	6				NaN	NaN	0	NaN	4388	2833	7217
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7224	21.941	NaN	9372.1	30	0	1004.8	0.14			+	29440	PCIGFINGQI	10	75	531.2760048217822	1060.5374567103643	2	531.2776489257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PCIGFINGQI_	REV__PDIA3|p.E238G|1|0.18|ENSG00000167004|chr15:43765560-43765560|A/G|missense_variant	71.29570347882199	0.26673431503403816	6				NaN	NaN	0	NaN	4389	2833	7217
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7242	21.981	NaN	51774	30	0	7444.2	0.214			+	22540	KTRKTMMVQ	9	98	569.807083431466	1137.599613929732	2	569.8092041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_KTRKTM(Oxidation (M))MVQ_	REV__ENST00000469448.1_1_X:118673692-118676584:-|nuORF	93.1432384553994	0.056003526918089595	6				NaN	NaN	0	NaN	4404	2836	7241
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7243	21.984	NaN	29018	30	0	4509.9	0.106			+	20478	KEYFKKAD	8	81	514.773324635774	1027.5320963383479	2	514.7740478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEYFKKAD_	REV__tr|U7SU18|U7SU18_FUSNUN-acetyltransferasedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00984PE=4SV=1	176.08678752253132	0.14500987704231208	6				NaN	NaN	0	NaN	4405	2836	7241
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7244	21.987	NaN	8038.1	30	0	931.34	0.106			+	48072	VSSRRQPR	8	76	493.2860598784033	984.5575668236066	2	493.2873840332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSSRRQPR_	REV__ENSG00000196220|ENST00000383836|SRGAP3;REV__ENST00000470951.5_1_3:9101821-9290635:-|nuORF;REV__ENST00000485983.6_1_3:9079745-9122942:-|nuORF;REV__nc|ENSG00000196220|O43295-2|SRGAP3;REV__nc|ENSG00000196220|O43295-3|SRGAP3;REV__SRGAP3|p.N833Tfs*18|1|0.3|ENSG00000196220|chr3:8992966-8992966|T/-|frameshift_variant	45.9519527083369	0.6193794311207887	6				NaN	NaN	0	NaN	4406	2836	7241
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7245	21.988	NaN	10799	30	0	1524.2	0.106			+	-1	LETLFCFVG	9	70	362.51611214555544	1084.5265070368664	3	362.517333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_LETLFC(Carbamidomethyl (C))FVG_	REV__ENST00000282388.3_2_2:43450650-43450884:-|nuORF	26.69291269510374	0.5537881896960711	6				NaN	NaN	0	NaN	4407	2836	7241
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7246	21.99	NaN	11460	30	0	1630.1	0.106	+			2330	AMLYLPLIG	9	94	503.78644694283025	1005.5583409524605	2	503.7873229980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_AM(Oxidation (M))LYLPLIG_	DOCK7|p.F1836Dfs*12|1|0.05|ENSG00000116641|chr1:62477795-62477796|-/TGTC|frameshift_variant;ENSG00000116641|ENST00000635253|DOCK7;nc|ENSG00000116641|Q96N67-2|DOCK7;nc|ENSG00000116641|Q96N67-3|DOCK7;nc|ENSG00000116641|Q96N67-4|DOCK7;nc|ENSG00000116641|Q96N67-5|DOCK7;nc|ENSG00000116641|Q96N67-6|DOCK7	60.403631409065575	0.21025000616765316	6				NaN	NaN	0	NaN	4408	2836	7241
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7247	21.992	NaN	15852	30	0	2029.7	0.035	+			4734	ATMLATGGNR	10	75	496.25452281622654	990.4944926992531	2	496.2530517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATMLATGGNR_	ENSG00000165678|ENST00000372134|GHITM	169.6522961985778	0.0037960298186563977	6				NaN	NaN	0	NaN	4409	2836	7241
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7248	21.993	NaN	13453	30	0	5582	0.144				-1	RSPRKCAPG	9	75	343.51836452739434	NaN	0	343.5184631347656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_RSPRKC(Carbamidomethyl (C))APG_	ENST00000393913.7_1_2:75749606-75787936:-|nuORF;ENST00000410113.5_1_2:75753312-75787936:-|nuORF;ENST00000485891.1_1_2:75745306-75787936:-|nuORF	24.519189625965996	0.35377483217337163	6				NaN	NaN	0	NaN	4410	2836	7241
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7266	22.031	NaN	86988	30	0	15842	0.205	+			7533	DGSLSAKRAG	10	108	481.25650875374043	960.4984645742809	2	481.258544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DGSLSAKRAG_	ENST00000532550.1_1_11:601671-606691:+|nuORF	107.00750918261382	0.05688644658934505	6				NaN	NaN	0	NaN	4425	2839	7265
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7267	22.034	NaN	36925	30	0	4456.7	0.106	+			46909	VISRAISVK	9	88	486.8121757537574	971.6097985743148	2	486.8135681152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VISRAISVK_	ENST00000530759.1_1_11:76155338-76155506:-|nuORF	91.26522074875469	0.06129826844580791	6				NaN	NaN	0	NaN	4426	2839	7265
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7268	22.036	NaN	123940	30	0	13547	0.106	+			38597	SSGFVAIKK	9	118	468.7790806660765	NaN	0	468.7792053222656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSGFVAIKK_	ENSG00000198478|ENST00000369838|SH3BGRL2;SH3BGRL2|p.P55Rfs*41|2|0.28|ENSG00000198478|chr6:79673727-79673727|C/-|frameshift_variant	176.08678752253132	0.006232316286355977	6				NaN	NaN	0	NaN	4427	2839	7265
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7269	22.038	NaN	45912	30	0	22504	0.106				-1	 	0	85	324.877182754557	971.609718863871	3	324.8782043457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4428	2839	7265
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7270	22.04	NaN	54215	30	0	29277	0.106				-1	 	0	87	364.896265486949	1091.666967061047	3	364.8973693847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4429	2839	7265
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7271	22.042	NaN	35718	30	0	4200.2	0.035				-1	 	0	84	494.7915596195221	987.5685663058442	2	494.7928771972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4430	2839	7265
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7272	22.042	NaN	22409	30	0	3672.6	0.148				-1	 	0	74	490.6178805576483	1468.8318122731448	3	490.6192626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4431	2839	7265
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7290	22.082	NaN	122990	30	0	12696	0.214	+			24212	LERKVESL	8	113	487.2861475279929	972.5577421227858	2	487.28729248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LERKVESL_	ENSG00000026025|ENST00000544301|VIM;ENST00000421459.2_2_10:17272631-17276850:+|nuORF	104.0567914643314	0.248440647781298	6				NaN	NaN	0	NaN	4446	2842	7289
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7291	22.085	NaN	66470	30	0	9785.8	0.106	+			37927	SPEDIKKAY	9	109	525.7756034494336	1049.536653965667	2	525.7774047851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SPEDIKKAY_	DNAJB6|p.R24W|1|0.27|ENSG00000105993|chr7:157363165-157363165|C/T|missense_variant;DNAJB7|p.A14V|1|0.08|ENSG00000172404|chr22:40861954-40861954|G/A|missense_variant;DNAJB8|p.R24H|1|0.38|ENSG00000179407|chr3:128463175-128463175|C/T|missense_variant;ENSG00000105993|ENST00000262177|DNAJB6;ENSG00000172404|ENST00000307221|DNAJB7;ENSG00000179407|ENST00000319153|DNAJB8;ENST00000488001.5_1_7:157151266-157161444:+|nuORF;ENST00000526843.2_1_11:127810983-127811547:-|nuORF;nc|ENSG00000105993|O75190-2|DNAJB6;nc|ENSG00000105993|O75190-3|DNAJB6	145.46060221211434	0.007927189773590037	6				NaN	NaN	0	NaN	4447	2842	7289
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7292	22.088	NaN	24346	30	0	6805.5	0.106	+			46005	VAVERARAL	9	87	492.7993596572916	983.5841663813832	2	492.8009338378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VAVERARAL_	ENSG00000126217|ENST00000535094|MCF2L;nc|ENSG00000126217|O15068-10|MCF2L;nc|ENSG00000126217|O15068-2|MCF2L;nc|ENSG00000126217|O15068-3|MCF2L;nc|ENSG00000126217|O15068-4|MCF2L;nc|ENSG00000126217|O15068-5|MCF2L;nc|ENSG00000126217|O15068-6|MCF2L;nc|ENSG00000126217|O15068-8|MCF2L;nc|ENSG00000126217|O15068|MCF2L	63.30626980617807	0.18605348971131092	6				NaN	NaN	0	NaN	4448	2842	7289
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7293	22.089	NaN	12015	30	0	1998.7	0.106				-1	 	0	75	546.840693080033	1091.666833226866	2	546.8426513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4449	2842	7289
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7294	22.091	NaN	82985	30	0	23311	0.106			+	42612	TATIRGEII	9	90	325.19325119468886	972.5579241842665	3	325.194091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TATIRGEII_	REV__ENSG00000096080|ENST00000372133|MRPS18A;REV__nc|ENSG00000096080|Q9NVS2-2|MRPS18A;REV__nc|ENSG00000096080|Q9NVS2-3|MRPS18A	55.50420428727701	0.2510918378945873	6				NaN	NaN	0	NaN	4450	2842	7289
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7295	22.093	NaN	64957	30	0	26100	0.036	+			37928	SPEDIKKAY	9	93	350.85383752292444	NaN	0	350.8537292480469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SPEDIKKAY_	DNAJB6|p.R24W|1|0.27|ENSG00000105993|chr7:157363165-157363165|C/T|missense_variant;DNAJB7|p.A14V|1|0.08|ENSG00000172404|chr22:40861954-40861954|G/A|missense_variant;DNAJB8|p.R24H|1|0.38|ENSG00000179407|chr3:128463175-128463175|C/T|missense_variant;ENSG00000105993|ENST00000262177|DNAJB6;ENSG00000172404|ENST00000307221|DNAJB7;ENSG00000179407|ENST00000319153|DNAJB8;ENST00000488001.5_1_7:157151266-157161444:+|nuORF;ENST00000526843.2_1_11:127810983-127811547:-|nuORF;nc|ENSG00000105993|O75190-2|DNAJB6;nc|ENSG00000105993|O75190-3|DNAJB6	58.22992032128504	0.15686832049467786	6				NaN	NaN	0	NaN	4451	2842	7289
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7296	22.094	NaN	14174	30	0	1770.1	0.14	+			34039	RSLMQMIPG	9	79	516.7714862550883	1031.5284195769766	2	516.7734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RSLMQMIPG_	tr|U7T2X3|U7T2X3_FUSNUPropanedioldehydrataselargesubunitOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00493PE=4SV=1	56.72105179125745	0.24094814563026265	6				NaN	NaN	0	NaN	4452	2842	7289
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7314	22.132	NaN	34150	30	0	6956.6	0.214				-1	 	0	89	467.74411345072855	933.4736739682571	2	467.745361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4467	2845	7313
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7315	22.135	NaN	112270	30	0	14242	0.106			+	-1	KMIPAQALVM	10	136	373.2084535887469	1116.6035313664408	3	373.5417175292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_KM(Oxidation (M))IPAQALVM_	REV__ENSG00000147059|ENST00000374906|SPIN2A;REV__ENSG00000186787|ENST00000434397|SPIN2B	33.921630207806714	0.6028135429846169	6				NaN	NaN	0	NaN	4468	2845	7313
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7316	22.138	NaN	11039	30	0	815.98	0.106			+	3445	ASQPGSTPGRI	11	73	535.7834957773266	1069.5524386214531	2	535.7853393554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASQPGSTPGRI_	REV__ENSG00000112851|ENST00000284037|ERBIN;REV__nc|ENSG00000112851|Q96RT1-2|ERBIN;REV__nc|ENSG00000112851|Q96RT1-3|ERBIN;REV__nc|ENSG00000112851|Q96RT1-4|ERBIN;REV__nc|ENSG00000112851|Q96RT1-5|ERBIN;REV__nc|ENSG00000112851|Q96RT1-6|ERBIN;REV__nc|ENSG00000112851|Q96RT1-7|ERBIN;REV__nc|ENSG00000112851|Q96RT1-8|ERBIN;REV__nc|ENSG00000112851|Q96RT1-9|ERBIN	59.93077597824379	0.32407304095777845	6				NaN	NaN	0	NaN	4469	2845	7313
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7317	22.139	NaN	26021	30	0	4449.3	0.106			+	-1	FHLLLCVIL	9	104	376.5596022576816	1126.656977373245	3	376.56085205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_FHLLLC(Carbamidomethyl (C))VIL_	REV__ENST00000342558.3_1_10:75231293-75231344:-|nuORF	37.15910966729921	0.4535818937225704	6				NaN	NaN	0	NaN	4470	2845	7313
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7318	22.141	NaN	10648	30	0	5110.1	0.106			+	22668	KTYRGGRR	8	77	497.288398426172	992.5622439191441	2	497.289794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KTYRGGRR_	REV__nc|ENSG00000100100|Q96FE7-2|PIK3IP1	37.15910966729921	0.6739408393984688	6				NaN	NaN	0	NaN	4471	2845	7313
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7319	22.143	NaN	28554	30	0	9247.2	0.035			+	13400	GLFDQVRGV	9	72	330.8504120485868	989.5294067459604	3	330.8514709472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GLFDQVRGV_	REV__ENSG00000162040|ENST00000454677|HS3ST6	29.14955571784316	0.5308295550522326	6				NaN	NaN	0	NaN	4472	2845	7313
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7320	22.144	NaN	12608	30	0	921.27	0.143	+			6774	CFAFTLLNHQ	10	83	597.2917433822947	1192.5689338313894	2	597.2935791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_CFAFTLLNHQ_	ENST00000444719.5_1_7:156619363-156629563:-|nuORF	56.72105179125745	0.3956618550748046	6				NaN	NaN	0	NaN	4473	2845	7313
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7338	22.183	NaN	105080	30	0	36404	0.214				-1	 	0	92	384.7708094433111	767.5270659534223	2	384.7719421386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4488	2848	7337
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7339	22.187	NaN	21755	30	0	3055.1	0.106			+	-1	FLEFSVMK	8	101	339.5091120726518	1015.5055068181555	3	339.51007080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_FLEFSVM(Oxidation (M))K_	REV__ENSG00000158480|ENST00000289431|SPATA2	40.77816245573522	0.6514838689002179	6				NaN	NaN	0	NaN	4489	2848	7337
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7340	22.189	NaN	47460	30	0	15445	0.106				-1	 	0	88	490.2861808759259	978.5578088186518	2	490.2874755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4490	2848	7337
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7341	22.191	NaN	10090	30	0	1063.6	0.106	+			18578	ISPHGNAL	8	71	404.71914517993036	NaN	0	404.7190856933594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ISPHGNAL_	ENSG00000166855|ENST00000300107|CLPX;ENST00000558103.1_1_15:65450907-65451087:-|nuORF;ENST00000558958.1_1_15:65449172-65477491:-|nuORF	111.64827973302667	1.7418937515398478	6				NaN	NaN	0	NaN	4491	2848	7337
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7342	22.192	NaN	17736	30	0	2936.1	0.106			+	2446	APIGASFIKY	10	84	533.8000397638438	1065.5855265944874	2	533.8019409179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_APIGASFIKY_	REV__tr|U7SX92|U7SX92_FUSNUSuccinyl-diaminopimelatedesuccinylaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00915PE=4SV=1	51.19269402634007	0.44601001148513897	6				NaN	NaN	0	NaN	4492	2848	7337
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7343	22.194	NaN	15809	30	0	2747.7	0.036	+			18368	IQSFKLPAY	9	82	356.2025178798461	1065.5857242397383	3	356.2037048339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IQSFKLPAY_	TLR4|p.E169A|1|0.41|ENSG00000136869|chr9:117712634-117712634|A/C|missense_variant	25.57405402267927	0.5642445186134241	6				NaN	NaN	0	NaN	4493	2848	7337
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7344	22.195	NaN	10584	30	0	2090.5	0.14	+			26776	LVQPVANVPA	10	67	336.5344378546052	NaN	0	336.5342102050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LVQPVANVPA_	ENSG00000060237|ENST00000315939|WNK1;nc|ENSG00000060237|Q9H4A3-2|WNK1;nc|ENSG00000060237|Q9H4A3-4|WNK1;nc|ENSG00000060237|Q9H4A3-5|WNK1;nc|ENSG00000060237|Q9H4A3-6|WNK1;nc|ENSG00000060237|Q9H4A3-7|WNK1	23.04248740728303	0.42010282974921537	6				NaN	NaN	0	NaN	4494	2848	7337
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7362	22.233	NaN	968620	30	0	244520	0.057	+			42400	TAKEELEVAK	10	96	373.2084535887469	1116.6035313664408	3	373.2098388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAKEELEVAK_	tr|U7T5P2|U7T5P2_FUSNUMacrolide-specificeffluxproteinMacAOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00034PE=3SV=1	64.20726635412375	0.3275756395432415	6				NaN	NaN	0	NaN	4509	2851	7361
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7363	22.234	NaN	232560	30	0	39900	0.079	+			20597	KGAFQERKGP	10	76	559.3095620509047	1116.6045711686093	2	559.3115844726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KGAFQERKGP_	nc|ENSG00000008128|Q9UQ88-8|CDK11A	64.20726635412375	0.3275756395432415	6				NaN	NaN	0	NaN	4510	2851	7361
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7364	22.235	NaN	142700	30	0	32995	0.106				-1	 	0	101	486.3145790332754	970.6146051333508	2	486.3157653808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4511	2851	7361
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7365	22.237	NaN	127540	30	0	78643	0.106				-1	 	0	83	327.19328264946546	978.5580185485965	3	327.19427490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4512	2851	7361
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7366	22.239	NaN	42559	30	0	4772.6	0.106				-1	 	0	74	397.2362474519473	792.4579419706946	2	397.2375793457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4513	2851	7361
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7367	22.241	NaN	20058	30	0	4335	0.106	+			33358	RHLLAEVSKQ	10	87	590.8436264966957	1179.6727000601913	2	590.8456420898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RHLLAEVSKQ_	ENSG00000198576|ENST00000356613|ARC	93.1432384553994	0.11307820852620741	6				NaN	NaN	0	NaN	4514	2851	7361
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7368	22.243	NaN	27475	30	0	17209	0.106	+			8328	EAKKTGNVKN	10	74	544.8066505917033	1087.5987482502064	2	544.808837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EAKKTGNVKN_	ENSG00000075292|ENST00000264447|ZNF638;nc|ENSG00000075292|Q14966-3|ZNF638;nc|ENSG00000075292|Q14966-4|ZNF638;ZNF638|p.A1154Qfs*28|1|0.42|ENSG00000075292|chr2:71422969-71422969|A/-|frameshift_variant;ZNF638|p.E1606Lfs*12|1|0.06|ENSG00000075292|chr2:71426683-71426684|-/CCTGAGAA|frameshift_variant;ZNF638|p.G1305Rfs*2|2|0.26|ENSG00000075292|chr2:71423418-71423419|-/A|frameshift_variant;ZNF638|p.G1305Vfs*22|2|0.39|ENSG00000075292|chr2:71423419-71423419|A/-|frameshift_variant	45.908116695636124	0.4947047446361497	6				NaN	NaN	0	NaN	4515	2851	7361
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7369	22.245	NaN	132030	30	0	80957	0.035			+	12221	GARQKRKK	8	102	324.5454580625568	970.6145447878705	3	324.54638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_GARQKRKK_	REV__CCAR2|p.L505*|5|0.17|ENSG00000158941|chr8:22615811-22615811|C/-|frameshift_variant;REV__CCAR2|p.R417Gfs*89|3|0.26|ENSG00000158941|chr8:22615462-22615462|C/-|frameshift_variant;REV__ENSG00000158941|ENST00000308511|CCAR2;REV__nc|ENSG00000158941|Q8N163-2|CCAR2	71.29570347882199	0.39610197767395533	6				NaN	NaN	0	NaN	4516	2851	7361
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7387	22.28	NaN	42759	30	0	8282.6	0.214	+			30124	PRREEEPR	8	94	534.7805623695454	1067.5465718058906	2	534.7822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PRREEEPR_	ENSG00000173327|ENST00000309100|MAP3K11;nc|ENSG00000173327|Q16584-2|MAP3K11;REV__ENST00000506502.2_1_5:145583270-145598550:+|nuORF	71.29570347882199	0.39610197767395533	6				NaN	NaN	0	NaN	4531	2854	7386
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7388	22.284	NaN	24370	30	0	12073	0.106			+	26036	LSLHKVFTSG	10	93	363.54131874418397	NaN	0	363.54132080078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSLHKVFTSG_	REV__AGL|p.K1407Nfs*8|1|0.39|ENSG00000162688|chr1:99915441-99915441|A/-|frameshift_variant;REV__AGL|p.N1304Ifs*10|1|0.38|ENSG00000162688|chr1:99912472-99912472|A/-|frameshift_variant;REV__AGL|p.N1304Kfs*7|1|0.38|ENSG00000162688|chr1:99912471-99912472|-/A|frameshift_variant;REV__ENSG00000162688|ENST00000361915|AGL;REV__nc|ENSG00000162688|P35573-2|AGL;REV__nc|ENSG00000162688|P35573-3|AGL	27.047317107675042	0.41136583337917604	6				NaN	NaN	0	NaN	4532	2854	7386
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7389	22.286	NaN	15644	30	0	2084.4	0.106				-1	 	0	81	471.81953815325437	941.6245233733088	2	471.8207702636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4533	2854	7386
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7390	22.287	NaN	13809	30	0	5397.7	0.106				-1	 	0	67	460.2569610352582	918.4993691373164	2	460.2580871582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4534	2854	7386
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7391	22.289	NaN	14413	30	0	3740.4	0.106	+			6368	AVTTVVNPK	9	69	464.77519129523864	927.5358296572773	2	464.7763366699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVTTVVNPK_	ENSG00000150093|ENST00000302278|ITGB1	93.1432384553994	0.056003526918089595	6				NaN	NaN	0	NaN	4535	2854	7386
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7392	22.291	NaN	76611	30	0	10884	0.035	+			42833	TEDLIRMR	8	111	517.279713903941	NaN	0	517.2797241210938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TEDLIRMR_	ENSG00000159023|ENST00000343067|EPB41;EPB41|p.K805Rfs*3|1|0.19|ENSG00000159023|chr1:29109433-29109433|C/-|frameshift_variant	60.97194046774394	1.7418937515398478	6				NaN	NaN	0	NaN	4536	2854	7386
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7393	22.292	NaN	8868.4	30	0	4921.5	0.139				-1	 	0	62	421.24676258329913	840.4789722333983	2	421.247802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4537	2854	7386
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7411	22.331	NaN	464410	30	0	113890	0.067			+	-1	RMMHRPAT	8	93	516.2472975548333	1030.4800421764664	2	516.2491455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_RM(Oxidation (M))M(Oxidation (M))HRPAT_	REV__ENSG00000119596|ENST00000325680|YLPM1;REV__nc|ENSG00000119596|P49750-1|YLPM1;REV__nc|ENSG00000119596|P49750-3|YLPM1	66.42927471994793	0.4381325844043345	6				NaN	NaN	0	NaN	4552	2857	7410
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7412	22.332	NaN	403890	30	0	171080	0.071			+	3182	ASKGVFEYM	9	88	344.5005416747741	1030.4797956245225	3	344.5018310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASKGVFEYM_	REV__ENSG00000036565|ENST00000276373|SLC18A1;REV__nc|ENSG00000036565|P54219-2|SLC18A1;REV__nc|ENSG00000036565|P54219-3|SLC18A1	38.80614096846853	0.43426287593479557	6				NaN	NaN	0	NaN	4553	2857	7410
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7413	22.333	NaN	123170	30	0	13915	0.106				-1	NPYIISCF	8	121	338.4970988438364	1012.4694671317093	3	338.4981994628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_NPYIISC(Carbamidomethyl (C))F_	ENST00000311417.6_1_3:178736696-178736894:-|nuORF	30.503639358989545	0.7238069182250283	6				NaN	NaN	0	NaN	4554	2857	7410
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7414	22.335	NaN	75551	30	0	26329	0.106				-1	 	0	98	437.213022448151	872.411491963102	2	437.2142028808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4555	2857	7410
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7415	22.337	NaN	15571	30	0	1353.6	0.106				-1	 	0	94	512.2938746202174	1022.5731963072348	2	512.29541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4556	2857	7410
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7416	22.339	NaN	32243	30	0	5553.6	0.106	+			3695	ATAAAIGATPR	11	104	500.28086853987077	998.5471841465416	2	500.2826232910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATAAAIGATPR_	ENSG00000137497|ENST00000393695|NUMA1;ENST00000540626.5_1_11:71714575-71718510:-|nuORF;nc|ENSG00000137497|Q14980-2|NUMA1;nc|ENSG00000137497|Q14980-5|NUMA1	122.93914200107957	0.014531093899805671	6				NaN	NaN	0	NaN	4557	2857	7410
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7417	22.341	NaN	9302	30	0	834.85	0.106				-1	 	0	72	589.8283789701404	1177.6422050070807	2	589.8302001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4558	2857	7410
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7418	22.343	NaN	9195.2	30	0	1096.9	0.033				-1	 	0	70	449.73374263659315	897.4529323399863	2	449.7348327636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4559	2857	7410
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7436	22.38	NaN	21443	30	0	6001.2	0.214			+	50030	WDQNELQIR	9	70	401.20323998225444	1200.5878905469633	3	401.20458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WDQNELQIR_	REV__ENST00000416904.4_1_12:53574496-53575518:+|nuORF	30.317721548370564	0.5199124245378496	6				NaN	NaN	0	NaN	4574	2860	7435
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7437	22.384	NaN	13209	30	0	2958.9	0.106	+			39720	STIPSTAMHTR	11	78	601.301627625527	1200.5887023178539	2	601.3034057617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STIPSTAMHTR_	ENSG00000145113|ENST00000463781|MUC4;MUC4|p.N4902Tfs*8|1|0.37|ENSG00000145113|chr3:195761027-195761027|T/-|frameshift_variant;nc|ENSG00000145113|Q99102-10|MUC4;nc|ENSG00000145113|Q99102-11|MUC4;nc|ENSG00000145113|Q99102-13|MUC4;nc|ENSG00000145113|Q99102-15|MUC4;nc|ENSG00000145113|Q99102-16|MUC4;nc|ENSG00000145113|Q99102-17|MUC4;nc|ENSG00000145113|Q99102-2|MUC4;nc|ENSG00000145113|Q99102-3|MUC4;nc|ENSG00000145113|Q99102-5|MUC4;nc|ENSG00000145113|Q99102-7|MUC4;nc|ENSG00000145113|Q99102-8|MUC4;nc|ENSG00000145113|Q99102-9|MUC4	80.870553263523	0.1451153566872633	6				NaN	NaN	0	NaN	4575	2860	7435
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7438	22.386	NaN	37595	30	0	4077.5	0.106	+			34170	RTATIMIQK	9	96	531.3090819098398	1060.6036108864796	2	531.3106689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RTATIMIQK_	ENSG00000167306|ENST00000285039|MYO5B	125.71293069911285	0.017741295328254008	6				NaN	NaN	0	NaN	4576	2860	7435
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7439	22.388	NaN	10850	30	0	1457.9	0.106			+	13674	GPDGPQGAI	9	62	406.20104476893977	NaN	0	406.2008361816406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GPDGPQGAI_	REV__ENSG00000197565|ENST00000334504|COL4A6;REV__nc|ENSG00000197565|Q14031|COL4A6	58.78195531508484	0.1545138866451181	6				NaN	NaN	0	NaN	4577	2860	7435
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7440	22.39	NaN	17871	30	0	3333.3	0.106	+			13198	GIASSSIAAK	10	78	452.7583296980776	NaN	0	452.75836181640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GIASSSIAAK_	ENSG00000165949|ENST00000612813|IFI27;nc|ENSG00000165949|P40305-1|IFI27;nc|ENSG00000165949|P40305-3|IFI27;nc|ENSG00000165949|P40305-4|IFI27	96.0336014099291	0.031046810967366768	6				NaN	NaN	0	NaN	4578	2860	7435
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7441	22.391	NaN	10889	30	0	2009.9	0.035			+	44408	TSLPLFCIL	9	76	503.78644694283025	1005.5583409524605	2	503.7876281738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TSLPLFCIL_	REV__ENST00000578804.5_2_17:62499940-62500153:-|nuORF	44.53106598305862	0.36711179743858174	6				NaN	NaN	0	NaN	4579	2860	7435
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7442	22.392	NaN	8658.9	30	0	2160.2	0.141			+	19783	KEALHKCAPP	10	78	547.2944191437473	1092.5742853542945	2	547.2968139648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KEALHKCAPP_	REV__ENSG00000244242|ENST00000340134|IFITM10;REV__ENST00000482459.1_1_11:1756512-1769373:-|nuORF	44.116797842482775	0.5112108506279902	6				NaN	NaN	0	NaN	4580	2860	7435
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7460	22.431	NaN	76450	30	0	14035	0.214			+	33397	RICGYHVVQ	9	81	537.7788842701295	1073.543215607059	2	537.7806396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RICGYHVVQ_	REV__CUL3|p.R153H|1|0.25|ENSG00000036257|chr2:224514693-224514693|C/T|missense_variant	85.35947970620816	0.07794846947388434	6				NaN	NaN	0	NaN	4595	2863	7459
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7461	22.435	NaN	22935	30	0	8360.5	0.106			+	27959	MVKAPFGSH	9	85	487.2495528502478	972.4845527672957	2	487.2508544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MVKAPFGSH_	REV__TRAPPC5|p.T161M|1|0.26|ENSG00000181029|chr19:7682735-7682735|C/T|missense_variant	63.30626980617807	0.18605348971131092	6				NaN	NaN	0	NaN	4596	2863	7459
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7462	22.437	NaN	21474	30	0	3950.5	0.106				-1	 	0	88	550.3068056226011	1098.5990583120022	2	550.308837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4597	2863	7459
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7463	22.439	NaN	20066	30	0	7037.1	0.106			+	44149	TQLESPSPKL	10	79	367.206114259275	1098.596513378025	3	367.2082214355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TQLESPSPKL_	REV__ENST00000395738.2_1_22:50921135-50921831:+|nuORF	49.536043120802724	0.461275219792494	6				NaN	NaN	0	NaN	4598	2863	7459
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7464	22.441	NaN	8549.5	30	0	3759.8	0.106	+			27389	MKLKDTLKS	9	67	355.21347454518695	NaN	0	355.2134704589844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MKLKDTLKS_	ENSG00000039560|ENST00000265109|RAI14;nc|ENSG00000039560|Q9P0K7-2|RAI14;nc|ENSG00000039560|Q9P0K7-3|RAI14;nc|ENSG00000039560|Q9P0K7-4|RAI14;RAI14|p.Q938Tfs*22|1|0.35|ENSG00000039560|chr5:34829743-34829744|AC/-|frameshift_variant	28.081489160057373	0.33578952234132536	6				NaN	NaN	0	NaN	4599	2863	7459
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7465	22.442	NaN	10660	30	0	3874.9	0.038	+			20943	KKCIGLIYVN	10	72	403.2336766363699	1206.6792005093098	3	403.2348937988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_KKC(Carbamidomethyl (C))IGLIYVN_	ZEB2|p.S339Y|1|0.33|ENSG00000169554|chr2:144400171-144400171|G/T|missense_variant	54.722347961057174	0.4138398245444204	6				NaN	NaN	0	NaN	4600	2863	7459
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7466	22.443	NaN	4351.9	30	0	548.1	0.14	+			21737	KQLQLSYV	8	62	489.78439371493477	NaN	0	489.78436279296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KQLQLSYV_	ENSG00000088899|ENST00000337576|LZTS3;nc|ENSG00000088899|O60299-2|LZTS3	63.30626980617807	1.7418937515398478	6				NaN	NaN	0	NaN	4601	2863	7459
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7484	22.483	NaN	90452	30	0	20947	0.214			+	36533	SFGNNIIAN	9	99	475.24061145449923	948.4666699757985	2	475.2419128417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SFGNNIIAN_	REV__tr|U7T0A5|U7T0A5_FUSNUDNApolymeraseIIIPolC-typeOS=FusobacteriumnucleatumCTI-5OX=1316586GN=polCPE=3SV=1	76.7741389293348	0.11149722112137898	6				NaN	NaN	0	NaN	4616	2866	7483
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7485	22.486	NaN	87341	30	0	35055	0.106				-1	 	0	103	362.7577734910884	723.5009940489768	2	362.7586975097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4617	2866	7483
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7486	22.488	NaN	29879	30	0	7160.6	0.106				-1	 	0	79	447.7361865945322	893.4578202558645	2	447.7373352050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4618	2866	7483
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7487	22.49	NaN	40512	30	0	19294	0.106			+	24798	LILEKSNSM	9	89	345.52359512093796	1033.548955963014	3	345.52471923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LILEKSNSM_	REV__ADRA1B|p.T252I|1|0.17|ENSG00000170214|chr5:159917660-159917660|C/T|missense_variant	24.20275056022122	0.577060078256802	6				NaN	NaN	0	NaN	4619	2866	7483
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7488	22.492	NaN	18070	30	0	1411.2	0.106	+			29431	PCGAPLARKSP	11	89	548.8037141033509	NaN	0	548.8037719726562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PCGAPLARKSP_	ENST00000354992.6_1_22:34316075-34316387:-|nuORF	84.9155231211612	0.058193436750176984	6				NaN	NaN	0	NaN	4620	2866	7483
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7489	22.494	NaN	69539	30	0	7125.4	0.034				-1	 	0	95	470.28319649966124	938.5518400661225	2	470.28436279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4621	2866	7483
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7490	22.494	NaN	15415	30	0	1106.9	0.14			+	-1	PIFSLLNIS	9	86	523.3012544990496	1044.5879560648991	2	523.3037719726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))PIFSLLNIS_	REV__ENST00000217515.10_2_18:54283496-54285305:-|nuORF;REV__TXNL1|p.C161Lfs*20|1|0.21|ENSG00000091164|chr18:56618014-56618014|C/-|frameshift_variant	44.116797842482775	0.37197099687881774	6				NaN	NaN	0	NaN	4622	2866	7483
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7508	22.532	NaN	38913	30	0	5748.4	0.214				-1	 	0	81	435.25699393142435	868.4994349296487	2	435.258056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4637	2869	7507
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7509	22.535	NaN	15646	30	0	1446.8	0.106			+	35314	SAMPNFASNK	10	92	533.7529520591806	1065.4913511851612	2	533.7548217773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAMPNFASNK_	REV__ENSG00000055609|ENST00000262189|KMT2C;REV__KMT2C|p.F4496Lfs*21|3|0.28|ENSG00000055609|chr7:152148439-152148439|A/-|frameshift_variant;REV__KMT2C|p.I4868Lfs*37|1|0.28|ENSG00000055609|chr7:152138837-152138837|T/-|frameshift_variant;REV__KMT2C|p.K2867Dfs*7|1|0.28|ENSG00000055609|chr7:152176853-152176854|TT/-|frameshift_variant;REV__KMT2C|p.P2292Hfs*13|1|0.25|ENSG00000055609|chr7:152180985-152180985|G/-|frameshift_variant;REV__KMT2C|p.S2816Ifs*6|1|0.44|ENSG00000055609|chr7:152177007-152177008|-/T|frameshift_variant;REV__KMT2C|p.T3715Qfs*4|1|0.34|ENSG00000055609|chr7:152162434-152162434|T/-|frameshift_variant;REV__nc|ENSG00000055609|Q8NEZ4-2|KMT2C;REV__nc|ENSG00000055609|Q8NEZ4-3|KMT2C	80.45461616416974	0.1919067876629769	6				NaN	NaN	0	NaN	4638	2869	7507
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7510	22.537	NaN	27983	30	0	7072.1	0.106				-1	 	0	86	384.7708094433111	767.5270659534223	2	384.7720642089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4639	2869	7507
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7511	22.539	NaN	11523	30	0	875.07	0.106	+			38754	SSLQEVYHK	9	79	545.7784589007324	1089.5423648682647	2	545.7802124023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSLQEVYHK_	ENSG00000143106|ENST00000271308|PSMA5;nc|ENSG00000143106|P28066-2|PSMA5	72.87924865735499	0.12833875048249987	6				NaN	NaN	0	NaN	4640	2869	7507
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7512	22.541	NaN	51320	30	0	18855	0.106	+			46887	VIPLPQWK	8	92	327.53547231549	979.58458754667	3	327.53680419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VIPLPQWK_	ENSG00000176476|ENST00000317058|SGF29;ENST00000565945.1_1_16:28602037-28603024:+|nuORF	29.841539824830324	0.7289191502596711	6				NaN	NaN	0	NaN	4641	2869	7507
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7513	22.543	NaN	11162	30	0	3377.9	0.034			+	23634	LAQKREEA	8	85	472.7609727663622	NaN	0	472.7613525390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LAQKREEA_	REV__nc|ENSG00000129195|Q9BSJ6|PIMREG	51.33545320467046	1.7418937515398478	6				NaN	NaN	0	NaN	4642	2869	7507
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7514	22.543	NaN	47917	30	0	5633	0.143			+	47430	VPSLCALKELV	11	86	391.2300140502091	1170.6682127508273	3	391.2312927246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VPSLCALKELV_	REV__ENSG00000165115|ENST00000297814|KIF27;REV__ENST00000422653.1_1_9:88385240-88401019:+|nuORF;REV__KIF27|p.K1223Tfs*2|1|0.11|ENSG00000165115|chr9:83842289-83842290|TT/-|frameshift_variant;REV__nc|ENSG00000165115|Q86VH2-2|KIF27;REV__nc|ENSG00000165115|Q86VH2-3|KIF27	31.634271133179894	0.6579734920221648	6				NaN	NaN	0	NaN	4643	2869	7507
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7532	22.583	NaN	86246	30	0	11407	0.176				-1	 	0	89	510.7589433905024	1019.5033338478048	2	510.7607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4658	2872	7531
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7533	22.586	NaN	115140	30	0	35200	0.106			+	2742	ARARAREGA	9	86	479.2706007452111	956.5266485572222	2	479.27154541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ARARAREGA_	REV__ENST00000460783.1_1_21:38071452-38071680:+|nuORF	84.9155231211612	0.07920012719736333	6				NaN	NaN	0	NaN	4659	2872	7531
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7534	22.588	NaN	52064	30	0	27333	0.106	+			22471	KTMKMRGQ	8	87	498.2599850447289	994.5054171562579	2	498.26129150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_KTMKM(Oxidation (M))RGQ_	ENSG00000125870|ENST00000246071|SNRPB2;ENST00000478522.1_1_20:16710709-16713038:+|nuORF	71.29570347882199	0.39610197767395533	6				NaN	NaN	0	NaN	4660	2872	7531
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7535	22.59	NaN	50856	30	0	13115	0.106	+			2724	AQTIVSLEEK	10	106	373.2084535887469	1116.6035313664408	3	373.2098083496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AQTIVSLEEK_	ENSG00000142621|ENST00000688493|FHAD1;ENST00000483120.1_1_1:15684662-15690294:+|nuORF;nc|ENSG00000142621|B1AJZ9-3|FHAD1;nc|ENSG00000142621|B1AJZ9-4|FHAD1;nc|ENSG00000142621|B1AJZ9|FHAD1	52.936696900407355	0.4300801048568001	6				NaN	NaN	0	NaN	4661	2872	7531
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7536	22.591	NaN	10892	30	0	1737.4	0.106			+	50164	WLAIRGCLEL	10	90	615.8363412438292	1229.6581295544584	2	615.8382568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_WLAIRGC(Carbamidomethyl (C))LEL_	REV__ENST00000379426.1_1_6:11575846-11576137:+|nuORF	93.19546047674547	0.11277922692270353	6				NaN	NaN	0	NaN	4662	2872	7531
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7537	22.593	NaN	31302	30	0	3079.5	0.106	+			6893	CLPRWLEA	8	89	494.25744971187976	986.5003464905595	2	494.2587585449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_CLPRWLEA_	ENSG00000187097|ENST00000334696|ENTPD5	45.9519527083369	0.6193794311207887	6				NaN	NaN	0	NaN	4663	2872	7531
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7538	22.595	NaN	18791	30	0	6321.1	0.035	+			7731	DLTKHQTY	8	80	503.2530917947267	NaN	0	503.2535400390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DLTKHQTY_	ENSG00000132698|ENST00000361084|RAB25;ENST00000487325.5_1_1:156038076-156039544:+|nuORF	60.97194046774394	1.7418937515398478	6				NaN	NaN	0	NaN	4664	2872	7531
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7556	22.631	NaN	39364	30	0	7471.6	0.214	+			16901	HPIQTQAQY	9	93	543.2704760539694	1084.5263991747388	2	543.2728271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HPIQTQAQY_	ENSG00000161813|ENST00000398473|LARP4;ENST00000521120.1_1_12:50835423-50848201:+|nuORF;LARP4|p.N373Ifs*3|1|0.26|ENSG00000161813|chr12:50454408-50454408|A/-|frameshift_variant;nc|ENSG00000161813|Q71RC2-2|LARP4;nc|ENSG00000161813|Q71RC2-3|LARP4;nc|ENSG00000161813|Q71RC2-4|LARP4;nc|ENSG00000161813|Q71RC2-6|LARP4;nc|ENSG00000161813|Q71RC2-7|LARP4	90.60085204095205	0.06317133949006545	6				NaN	NaN	0	NaN	4679	2875	7555
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7557	22.635	NaN	58871	30	0	10157	0.106				-1	 	0	113	537.3305964790565	1072.6466400249128	2	537.3324584960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4680	2875	7555
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7558	22.637	NaN	21517	30	0	2530.3	0.106			+	20810	KIEMIITPKY	10	80	626.3547827573118	1250.6950125814235	2	626.35693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_KIEM(Oxidation (M))IITPKY_	REV__tr|U7SNI5|U7SNI5_FUSNUSingle-stranded-DNA-specificexonucleaseRecJOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01772PE=3SV=1	64.20726635412375	0.3275756395432415	6				NaN	NaN	0	NaN	4681	2875	7555
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7559	22.639	NaN	33569	30	0	6837.7	0.106				-1	 	0	97	384.72420245658486	767.4338519799697	2	384.7256164550781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4682	2875	7555
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7560	22.641	NaN	151420	30	0	41287	0.106				-1	ATVMLPVKKP	10	97	367.2229318127604	1098.6469660384812	3	367.2242736816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_ATVM(Oxidation (M))LPVKKP_	NBEAL1|p.D657Vfs*8|1|0.05|ENSG00000144426|chr2:203110256-203110257|-/TAAAAAA|frameshift_variant	36.446750945000026	0.5818864909973037	6				NaN	NaN	0	NaN	4683	2875	7555
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7561	22.642	NaN	30232	30	0	3170.7	0.035			+	11858	FTAVEVKSGA	10	90	504.77149753111684	1007.5284421290337	2	504.7733154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FTAVEVKSGA_	REV__nc|ENSG00000177910|B4DYI2|SPATA31C2	90.60085204095205	0.12763388345653318	6				NaN	NaN	0	NaN	4684	2875	7555
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7562	22.643	NaN	16489	30	0	3748.3	0.139	+			6808	CGPRPCLLHKG	11	83	394.2084885400226	1179.6036362202678	3	394.2103271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_CGPRPCLLHKG_	ENSG00000101384|ENST00000254958|JAG1;nc|ENSG00000101384|P78504-2|JAG1	26.063383197487333	0.7164075632144343	6				NaN	NaN	0	NaN	4685	2875	7555
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7580	22.681	NaN	37999	30	0	8695.1	0.205	+			21413	KMRVCISK	8	85	519.2832383025914	1036.5519236719826	2	519.2848510742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_KM(Oxidation (M))RVC(Carbamidomethyl (C))ISK_	ENSG00000218819|ENST00000405799|TDRD15	68.78682469695295	0.41700713582915416	6				NaN	NaN	0	NaN	4700	2878	7579
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7581	22.685	NaN	69462	30	0	15738	0.106				-1	 	0	93	450.7598573624636	899.5051617917272	2	450.7608642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4701	2878	7579
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7582	22.687	NaN	53006	30	0	12382	0.106			+	26581	LTTRDIVKCGT	11	97	402.88841095778463	1205.643403473554	3	402.8897705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LTTRDIVKCGT_	REV__tr|U7SJ60|U7SJ60_FUSNUGTPaseHflXOS=FusobacteriumnucleatumCTI-5OX=1316586GN=hflXPE=3SV=1	32.03412808689991	0.6537793186749145	6				NaN	NaN	0	NaN	4702	2878	7579
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7583	22.689	NaN	23285	30	0	9976.6	0.106	+			3115	ASGSHGRLPR	10	83	346.5244193107838	1036.5514285325514	3	346.525634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASGSHGRLPR_	ENST00000400454.5_1_21:41516612-41539212:-|nuORF	33.921630207806714	0.6028135429846169	6				NaN	NaN	0	NaN	4703	2878	7579
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7584	22.691	NaN	11344	30	0	1297	0.106			+	12146	GAIIVGNRK	9	70	464.2889988664675	926.5634447997351	2	464.2900695800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GAIIVGNRK_	REV__ENSG00000119203|ENST00000238112|CPSF3	85.35947970620816	0.07794846947388434	6				NaN	NaN	0	NaN	4704	2878	7579
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7585	22.692	NaN	17538	30	0	3516.8	0.106	+			31403	QKKQQEQK	8	75	522.7939397457013	1043.5733265582026	2	522.795654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QKKQQEQK_	ENSG00000181827|ENST00000559447|RFX7;nc|ENSG00000181827|Q2KHR2-1|RFX7;nc|ENSG00000181827|Q2KHR2-2|RFX7;RFX7|p.I1152*|2|0.36|ENSG00000181827|chr15:56093983-56093983|T/-|frameshift_variant;RFX7|p.K235Sfs*10|1|0.05|ENSG00000181827|chr15:56098193-56098193|T/-|frameshift_variant;RFX7|p.S919Afs*14|1|0.11|ENSG00000181827|chr15:56094683-56094683|G/-|frameshift_variant	76.7741389293348	0.3504530765139327	6				NaN	NaN	0	NaN	4705	2878	7579
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7586	22.694	NaN	20167	30	0	5438.7	0.035	+			3203	ASKKIHTEP	9	75	337.52582187790097	1009.555636233903	3	337.5270690917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASKKIHTEP_	ENSG00000172053|ENST00000306125|QARS1;ENST00000479495.5_1_3:49140063-49142467:-|nuORF;ENST00000482438.2_1_3:49141637-49142166:-|nuORF	21.9598887501803	0.5980208138527809	6				NaN	NaN	0	NaN	4706	2878	7579
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7604	22.732	NaN	52794	30	0	8234.9	0.214			+	37402	SLGFIVTIAM	10	97	526.2966860231161	1050.578819113032	2	526.2984008789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLGFIVTIAM_	REV__tr|U7SPX4|U7SPX4_FUSNUHAE1familyhydrophobic/amphiphilicexporter-1(MainlyG-bacteria)OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01680PE=4SV=1	56.43379154798735	0.3982744522255666	6				NaN	NaN	0	NaN	4721	2881	7603
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7605	22.735	NaN	48537	30	0	8078.8	0.106			+	21089	KKPDAPCTIYT	11	102	647.3290208850908	1292.6434888369815	2	647.3308715820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_KKPDAPC(Carbamidomethyl (C))TIYT_	REV__ENSG00000070761|ENST00000262498|CFAP20;REV__ENST00000562622.5_1_16:58149118-58163019:-|nuORF;REV__ENST00000567092.1_1_16:58149929-58163019:-|nuORF	54.722347961057174	0.3705654281804646	6				NaN	NaN	0	NaN	4722	2881	7603
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7606	22.738	NaN	10235	30	0	779.61	0.106	+			24636	LGSRGRRR	8	71	479.2941798122473	956.5738066912946	2	479.29534912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LGSRGRRR_	ENSG00000161681|ENST00000293441|SHANK1;nc|ENSG00000161681|Q9Y566-3|SHANK1;REV__ENSG00000257008|ENST00000582579|GPR142;REV__nc|ENSG00000257008|Q7Z601|GPR142;SHANK1|p.L2065Sfs*68|1|0.18|ENSG00000161681|chr19:50662259-50662259|C/-|frameshift_variant;SHANK1|p.T693Pfs*33|2|0.23|ENSG00000161681|chr19:50688940-50688940|G/-|frameshift_variant	73.97473282117947	0.3737790450121076	6				NaN	NaN	0	NaN	4723	2881	7603
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7607	22.739	NaN	22055	30	0	5667	0.106	+			40936	SVFSDKLHSK	10	91	574.3075636216084	1146.6005743100168	2	574.3091430664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVFSDKLHSK_	ENSG00000187257|ENST00000334955|RSBN1L;nc|ENSG00000187257|Q6PCB5-2|RSBN1L;PTPN12-RSBN1L|1|fusion;PTPN12-RSBN1L|2|fusion;PTPN12-RSBN1L|3|fusion;PTPN12-RSBN1L|4|fusion;PTPN12-RSBN1L|5|fusion;PTPN12-RSBN1L|6|fusion;PTPN12-RSBN1L|7|fusion;PTPN12-RSBN1L|8|fusion	79.03558427241974	0.20350015593366697	6				NaN	NaN	0	NaN	4724	2881	7603
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7608	22.741	NaN	22287	30	0	3965.8	0.106	+			8614	ECPRCARITA	10	79	560.2734774522921	1118.5324019713842	2	560.275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ECPRCARITA_	ENSG00000102445|ENST00000429979|RUBCNL;ENST00000441284.5_2_13:46917522-46942212:-|nuORF;ENST00000487195.5_1_13:46917522-46924493:-|nuORF;nc|ENSG00000102445|Q9H714-3|RUBCNL;nc|ENSG00000102445|Q9H714-6|RUBCNL	69.6276240434122	0.2803623802747859	6				NaN	NaN	0	NaN	4725	2881	7603
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7609	22.743	NaN	9879.1	30	0	1130.9	0.037	+			8427	EAQSSKDQMR	10	80	590.2764266330698	1178.5383003329396	2	590.2786865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EAQSSKDQMR_	ENSG00000136002|ENST00000409359|ARHGEF4;ENST00000490728.5_1_2:131797582-131799036:+|nuORF;nc|ENSG00000136002|Q9NR80-3|ARHGEF4;nc|ENSG00000136002|Q9NR80-4|ARHGEF4;nc|ENSG00000136002|Q9NR80|ARHGEF4	78.26377905018397	0.20980573808910843	6				NaN	NaN	0	NaN	4726	2881	7603
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7610	22.744	NaN	9685.9	30	0	1028.7	0.142			+	8630	EDELAVHDTK	10	80	578.7784723624227	1155.5423917916453	2	578.77978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EDELAVHDTK_	REV__ABCA8|p.L1128*|1|0.37|ENSG00000141338|chr17:68885242-68885242|A/-|frameshift_variant;REV__ENSG00000141338|ENST00000586539|ABCA8;REV__ENST00000541225.5_1_17:66883094-66937097:-|nuORF;REV__nc|ENSG00000141338|O94911-1|ABCA8	76.7741389293348	0.22197596950688292	6				NaN	NaN	0	NaN	4727	2881	7603
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7629	22.782	NaN	21813	30	0	1650.9	0.214				-1	 	0	79	508.80134847781954	1015.5881440224391	2	508.8029479980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4743	2884	7628
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7630	22.786	NaN	18678	30	0	1575.7	0.106	+			6932	CNSTTSSRK	9	82	520.743410617024	1039.4722683008479	2	520.7452392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_C(Carbamidomethyl (C))NSTTSSRK_	ENST00000549437.5_1_12:25215794-25219317:+|nuORF;ENST00000554272.5_1_12:25215794-25219317:+|nuORF	56.72105179125745	0.24094814563026265	6				NaN	NaN	0	NaN	4744	2884	7628
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7631	22.788	NaN	17451	30	0	2863.4	0.106				-1	 	0	79	487.2495528502478	972.4845527672957	2	487.75213623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4745	2884	7628
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7632	22.79	NaN	32979	30	0	3212.2	0.106				-1	 	0	86	469.7492977125369	937.4840424918738	2	469.75042724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4746	2884	7628
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7633	22.791	NaN	13937	30	0	2825.9	0.106				-1	STACPTGGD	9	76	433.17014015883916	864.3257273844783	2	433.1717529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_STAC(Carbamidomethyl (C))PTGGD_	nc|ENSG00000143303|Q96FB5-2|METTL25B;PRCC-RRNAD1|1|fusion;PRCC-RRNAD1|3|fusion	35.61828744233558	0.47037581924408073	6				NaN	NaN	0	NaN	4747	2884	7628
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7634	22.793	NaN	17233	30	0	2242	0.035	+			1061	AEKSEQPTL	9	81	501.75753724065004	1001.5005215481001	2	501.7586669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEKSEQPTL_	ENSG00000115368|ENST00000314761|WDR75;ENST00000436347.5_1_2:190313199-190340140:+|nuORF	91.26522074875469	0.06129826844580791	6				NaN	NaN	0	NaN	4748	2884	7628
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7635	22.794	NaN	10436	30	0	1691.8	0.144			+	37503	SLLEMVPIV	9	82	339.528252863817	1015.5629291916509	3	339.5378112792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_SLLEM(Oxidation (M))VPIV_	REV__ENSG00000147894|ENST00000380003|C9orf72;REV__ENST00000488117.5_1_9:27560206-27567121:-|nuORF;REV__nc|nan|Q96LT7-2|C9orf72	47.657333605630114	0.33044192980041115	6				NaN	NaN	0	NaN	4749	2884	7628
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7653	22.832	NaN	90463	30	0	17626	0.207	+			17843	IFLPAMSR	8	89	467.7623963461376	933.5102397590753	2	467.76361083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IFLPAMSR_	L1MB8_dup1763|chr2:109988481-109989376:-|1.5294594278598173|0.259115602067641|2.56|476.0|59|3|anti-sense	114.5858319719848	0.24229603992967627	6				NaN	NaN	0	NaN	4764	2887	7652
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7654	22.836	NaN	41772	30	0	20412	0.106	+			367	AARERIKQQI	10	99	404.91065758004254	1211.7101433403277	3	404.9118957519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AARERIKQQI_	ENSG00000144224|ENST00000272638|UBXN4	33.921630207806714	0.6028135429846169	6				NaN	NaN	0	NaN	4765	2887	7652
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7655	22.838	NaN	52420	30	0	31370	0.106			+	42841	TEEQAPKKQ	9	88	529.7778912104831	1057.541229487766	2	529.77978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TEEQAPKKQ_	REV__chr12:65951415-65963245|431|16.75|0.63|4.73|+|0|HMGA2,HMGA2|1;REV__ENSG00000149948|ENST00000403681|HMGA2	58.78195531508484	0.22376836668196862	6				NaN	NaN	0	NaN	4766	2887	7652
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7656	22.839	NaN	16060	30	0	1779.3	0.106			+	18109	ILAEKCGSY	9	84	492.24718379007317	982.4798146469464	2	492.2486877441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ILAEKCGSY_	REV__ENSG00000145850|ENST00000274532|TIMD4;REV__nc|ENSG00000145850|Q96H15-2|TIMD4	51.33545320467046	0.2872990594074956	6				NaN	NaN	0	NaN	4767	2887	7652
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7657	22.841	NaN	15249	30	0	2753.7	0.106			+	44423	TSLSGCGVRQ	10	77	504.25124298852575	1006.4879330438515	2	504.25274658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TSLSGCGVRQ_	REV__ENST00000377041.6_1_9:74489991-74525763:-|nuORF	58.22992032128504	0.38193887838457763	6				NaN	NaN	0	NaN	4768	2887	7652
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7658	22.843	NaN	4929.4	30	0	244.53	0.035			+	44293	TSAQPAMRQ	9	71	330.49954393354756	988.4768024008426	3	330.5006103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TSAQPAMRQ_	REV__ENSG00000109101|ENST00000579795|FOXN1;REV__FOXN1|p.P416Qfs*134|1|0.33|ENSG00000109101|chr17:28534814-28534814|C/-|frameshift_variant;REV__FOXN1|p.P583Lfs*5|1|0.16|ENSG00000109101|chr17:28537232-28537232|C/-|frameshift_variant	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	4769	2887	7652
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7659	22.844	NaN	59850	30	0	31045	0.142	+			26999	LYPVGWCQL	9	83	379.1917001451077	1134.553271035523	3	379.19287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_LYPVGWC(Carbamidomethyl (C))QL_	ENSG00000011258|ENST00000586178|MBTD1;nc|ENSG00000011258|Q05BQ5-3|MBTD1	42.396135135203025	0.392153681582562	6				NaN	NaN	0	NaN	4770	2887	7652
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7677	22.882	NaN	84083	30	0	17016	0.205	+			8202	EADHITTDV	9	88	500.7316852664209	999.4488175996419	2	500.7326354980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EADHITTDV_	ENSG00000109452|ENST00000262992|INPP4B;INPP4B|p.K530Efs*15|1|0.23|ENSG00000109452|chr4:142145972-142145973|-/C|frameshift_variant	87.75429964447693	0.0711966946989736	6				NaN	NaN	0	NaN	4785	2890	7676
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7678	22.886	NaN	29861	30	0	4525.6	0.106			+	4508	ATITTWQR	8	96	488.7645932809527	975.5146336287054	2	488.7658386230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATITTWQR_	REV__ENSG00000141441|ENST00000269209|GAREM1;REV__nc|ENSG00000141441|Q9H706-2|GAREM1;REV__nc|ENSG00000141441|Q9H706-3|GAREM1	66.42927471994793	0.4381325844043345	6				NaN	NaN	0	NaN	4786	2890	7676
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7679	22.888	NaN	16135	30	0	8192.8	0.106			+	23209	KYFGFSMKQ	9	68	568.2844038972834	1134.5542548613666	2	568.2862548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KYFGFSMKQ_	REV__ENSG00000100364|ENST00000336156|KIAA0930;REV__KIAA0930|p.T293Hfs*26|1|0.3|ENSG00000100364|chr22:45200011-45200012|-/G|frameshift_variant;REV__KIAA0930|p.T293Pfs*27|2|0.16|ENSG00000100364|chr22:45200012-45200012|G/-|frameshift_variant;REV__nc|ENSG00000100364|Q6ICG6-2|KIAA0930;REV__nc|ENSG00000100364|Q6ICG6-3|KIAA0930	74.1650062923329	0.12277912660386392	6				NaN	NaN	0	NaN	4787	2890	7676
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7680	22.89	NaN	26292	30	0	4855.7	0.106	+			31544	QLLMTLYVGK	10	77	389.2263400721547	1164.657190816664	3	389.22784423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QLLMTLYVGK_	ENSG00000134398|ENST00000256797|ERN2;ERN2|p.L515Wfs*48|1|0.41|ENSG00000134398|chr16:23700665-23700665|G/-|frameshift_variant;ERN2|p.Q822Rfs*35|1|0.26|ENSG00000134398|chr16:23692019-23692019|G/-|frameshift_variant	50.033510581677724	0.4566913063131936	6				NaN	NaN	0	NaN	4788	2890	7676
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7681	22.891	NaN	11853	30	0	3756.7	0.106				-1	 	0	70	339.528252863817	1015.5629291916509	3	339.529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4789	2890	7676
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7682	22.893	NaN	9415.1	30	0	2572.2	0.106	+			21830	KRGCQASCI	9	73	483.23633777487373	964.4581226165475	2	483.23724365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KRGCQASCI_	ENST00000449079.7_1_20:2740250-2740700:+|nuORF;ENST00000463145.2_3_20:2730128-2740700:+|nuORF	30.503639358989545	0.5181749237905803	6				NaN	NaN	0	NaN	4790	2890	7676
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7683	22.895	NaN	14971	30	0	3636.6	0.032				-1	 	0	77	384.7708094433111	767.5270659534223	2	384.7721862792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4791	2890	7676
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7701	22.932	NaN	15401	30	0	1694.5	0.214			+	43306	TFTPNHETM	9	82	539.237376663018	1076.460200392836	2	539.2393188476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TFTPNHETM_	REV__ENSG00000168038|ENST00000301831|ULK4	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	4806	2893	7700
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7702	22.936	NaN	27457	30	0	11788	0.106	+			42600	TATATNHVL	9	75	464.24659435301675	926.4786357728335	2	464.24822998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TATATNHVL_	ENSG00000004700|ENST00000444129|RECQL	106.68306549817024	0.032382560583716295	6				NaN	NaN	0	NaN	4807	2893	7700
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7703	22.938	NaN	13921	30	0	3126.5	0.106	+			13158	GGRKPHARGA	10	81	503.78644694283025	1005.5583409524605	2	503.7874450683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GGRKPHARGA_	ENST00000520083.1_1_9:36923038-36923170:-|nuORF	51.33545320467046	0.4446945571623749	6				NaN	NaN	0	NaN	4808	2893	7700
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7704	22.94	NaN	16934	30	0	3123.6	0.106			+	4014	ATCSRMLR	8	72	505.7469342783584	1009.4793156235169	2	505.74853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_ATC(Carbamidomethyl (C))SRM(Oxidation (M))LR_	REV__NDRG1|p.R327C|1|0.38|ENSG00000104419|chr8:133239084-133239084|G/A|missense_variant	66.42927471994793	0.4381325844043345	6				NaN	NaN	0	NaN	4809	2893	7700
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7705	22.942	NaN	11298	30	0	2385.3	0.106			+	47981	VSPHILGTAL	10	63	336.5344378546052	NaN	0	336.5342102050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSPHILGTAL_	REV__ENSG00000111701|ENST00000229304|APOBEC1	21.9598887501803	0.4201028297492154	6				NaN	NaN	0	NaN	4810	2893	7700
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7706	22.944	NaN	13573	30	0	3645.6	0.033			+	45891	VAPMLPEL	8	70	435.24414780708037	868.4737426809608	2	435.2453308105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VAPMLPEL_	REV__CAMSAP1|p.E781Afs*3|1|0.06|ENSG00000130559|chr9:135822319-135822320|-/G|frameshift_variant;REV__CAMSAP1|p.Q633Sfs*8|1|0.28|ENSG00000130559|chr9:135822764-135822764|G/-|frameshift_variant;REV__ENSG00000130559|ENST00000389532|CAMSAP1;REV__ENST00000483991.5_1_9:138703157-138717996:-|nuORF;REV__nc|ENSG00000130559|Q5T5Y3-2|CAMSAP1;REV__nc|ENSG00000130559|Q5T5Y3-3|CAMSAP1	54.76467175910256	0.5536104764165384	6				NaN	NaN	0	NaN	4811	2893	7700
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7707	22.944	NaN	15325	30	0	9317.5	0.138	+			43988	TPGPELQR	8	64	449.24290660892615	NaN	0	449.2428894042969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TPGPELQR_	ENSG00000100078|ENST00000215885|PLA2G3	68.78682469695295	1.7418937515398478	6				NaN	NaN	0	NaN	4812	2893	7700
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7725	22.984	NaN	99506	30	0	19181	0.214			+	44125	TQAFAQAIGAG	11	105	517.7666573280791	1033.518761722958	2	517.7686767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TQAFAQAIGAG_	REV__tr|U7SW15|U7SW15_FUSNU3-hydroxybutyryl-CoAdehydrogenaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01419PE=3SV=1	72.87924865735499	0.21173632944124365	6				NaN	NaN	0	NaN	4827	2896	7724
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7726	22.987	NaN	20462	30	0	10706	0.106	+			33660	RNEGGESVLV	10	82	530.2727972985274	1058.5310416638547	2	530.77490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RNEGGESVLV_	ENSG00000152580|ENST00000282466|IGSF10;ENST00000495443.1_1_3:151154479-151158406:-|nuORF;nc|ENSG00000152580|Q6WRI0-2|IGSF10;nc|ENSG00000152580|Q6WRI0-3|IGSF10	39.252832667884924	0.5560298534376815	6				NaN	NaN	0	NaN	4828	2896	7724
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7727	22.989	NaN	24362	30	0	5809.9	0.106			+	13399	GLEVSTAIAEK	11	86	373.2084535887469	1116.6035313664408	3	373.20989990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GLEVSTAIAEK_	REV__ENSG00000163554|ENST00000643759|SPTA1;REV__nc|ENSG00000163554|P02549-2|SPTA1;REV__SPTA1|p.D609Vfs*11|1|0.27|ENSG00000163554|chr1:158669415-158669416|-/CTTCATCA|frameshift_variant;REV__SPTA1|p.N501Tfs*33|1|0.11|ENSG00000163554|chr1:158671440-158671440|T/-|frameshift_variant	60.11826168202944	0.32239947305776	6				NaN	NaN	0	NaN	4829	2896	7724
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7728	22.991	NaN	29076	30	0	9273.7	0.106				-1	 	0	92	346.55250443985597	1036.6356839197679	3	346.5535888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4830	2896	7724
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7729	22.993	NaN	18032	30	0	6555.2	0.106				-1	 	0	79	535.3202667321746	1068.625980531149	2	535.3224487304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4831	2896	7724
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7730	22.995	NaN	6464.9	30	0	695.55	0.035			+	-1	VTINPMSSI	9	73	489.25027188295144	976.4859908327029	2	489.25201416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_VTINPM(Oxidation (M))SSI_	REV__ENSG00000104517|ENST00000520539|UBR5;REV__nc|ENSG00000104517|O95071-2|UBR5;REV__UBR5|p.A1046Rfs*49|1|0.21|ENSG00000104517|chr8:102299518-102299519|-/G|frameshift_variant;REV__UBR5|p.E2121Kfs*28|1|0.39|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant;REV__UBR5|p.E2121Rfs*13|1|0.28|ENSG00000104517|chr8:102277120-102277121|-/T|frameshift_variant;REV__UBR5|p.F2571Lfs*4|2|0.31|ENSG00000104517|chr8:102262044-102262044|A/-|frameshift_variant;REV__UBR5|p.I1021*|1|0.41|ENSG00000104517|chr8:102300046-102300046|G/-|frameshift_variant;REV__UBR5|p.I1021Hfs*5|1|0.23|ENSG00000104517|chr8:102300045-102300046|-/G|frameshift_variant;REV__UBR5|p.K2120Rfs*13|1|0.24|ENSG00000104517|chr8:102277121-102277122|TT/-|frameshift_variant	71.87747018426188	0.13267044672804276	6				NaN	NaN	0	NaN	4832	2896	7724
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7731	22.995	NaN	4359.6	30	0	427.57	0.139	+			9327	EIGRKMSK	8	78	474.7693653670431	947.5241778008863	2	474.7716979980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EIGRKMSK_	tr|U7T180|U7T180_FUSNUValine--tRNAligaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=valSPE=3SV=1	49.44154591367651	0.597725784090933	6				NaN	NaN	0	NaN	4833	2896	7724
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7749	23.032	NaN	548750	30	0	89614	0.169				-1	 	0	146	336.5210527345724	1006.5413288039172	3	336.5220947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4848	2899	7748
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7750	23.034	NaN	60948	30	0	15064	0.106				-1	 	0	85	477.78307828382054	953.5516036344411	2	477.7841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4849	2899	7748
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7751	23.037	NaN	81857	30	0	36102	0.106				-1	 	0	95	324.21737305714106	969.6302897716232	3	324.21832275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4850	2899	7748
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7752	23.038	NaN	46937	30	0	8935	0.106				-1	 	0	90	449.2779742451174	896.5413955570348	2	449.2791442871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4851	2899	7748
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7753	23.04	NaN	18121	30	0	4303.2	0.106				-1	 	0	81	485.8223913094646	969.6302296857292	2	485.8235778808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4852	2899	7748
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7754	23.042	NaN	6453.5	30	0	799.52	0.106			+	20801	KIASCSVARE	10	75	532.2817993164062	NaN	0	532.2817993164062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KIASCSVARE_	REV__ENST00000405486.5_2_22:41642303-41642387:-|nuORF	72.87924865735499	0.13450315462291293	6				NaN	NaN	0	NaN	4853	2899	7748
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7755	23.044	NaN	7456.8	30	0	786.1	0.035	+			46261	VEGGMPKGLL	10	89	508.7766586597879	NaN	0	508.77734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_VEGGM(Oxidation (M))PKGLL_	ENST00000394936.7_1_10:73576084-73576285:-|nuORF	78.26377905018397	0.10800580676963668	6				NaN	NaN	0	NaN	4854	2899	7748
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7773	23.078	NaN	181190	30	0	22571	0.129				-1	 	0	76	504.2781238229733	1006.5416947127467	2	504.279541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4869	2902	7772
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7774	23.081	NaN	28605	30	0	4544.1	0.106	+			29360	PACPVELTL	9	78	471.75228128880076	941.4900096444015	2	471.75341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PACPVELTL_	tr|U7SJ28|U7SJ28_FUSNUHTHhxlR-typedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02070PE=4SV=1	37.15910966729921	0.4535818937225704	6				NaN	NaN	0	NaN	4870	2902	7772
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7775	23.083	NaN	28270	30	0	10584	0.106	+			32029	QRPRGDGQ	8	76	457.2333125268466	912.4520721204932	2	457.234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QRPRGDGQ_	ENSG00000176225|ENST00000640769|RTTN;ENST00000581583.1_1_18:67834153-67872894:-|nuORF;nc|ENSG00000176225|Q86VV8-2|RTTN;nc|ENSG00000176225|Q86VV8-3|RTTN;nc|ENSG00000176225|Q86VV8-4|RTTN;RTTN|p.Y1487Mfs*4|1|0.38|ENSG00000176225|chr18:70075457-70075457|A/-|frameshift_variant	45.9519527083369	0.6193794311207887	6				NaN	NaN	0	NaN	4871	2902	7772
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7776	23.085	NaN	24991	30	0	11057	0.106	+			45778	VAGDIVLDK	9	76	465.2667831401822	928.5190133471644	2	465.2683410644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VAGDIVLDK_	ENSG00000116922|ENST00000486637|C1orf109;ENST00000464178.1_1_1:38148756-38155336:-|nuORF;ENST00000491797.1_1_1:38155276-38156178:-|nuORF	104.74654710444128	0.034358562718640136	6				NaN	NaN	0	NaN	4872	2902	7772
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7777	23.086	NaN	25590	30	0	14395	0.106				-1	 	0	71	425.7232238145583	849.4318946959166	2	425.72430419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4873	2902	7772
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7778	23.088	NaN	14743	30	0	1755.7	0.106	+			17783	IESVNGKTV	9	84	473.7618635543828	945.5091741755656	2	473.763427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IESVNGKTV_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	76.16968421966216	0.11411088698345859	6				NaN	NaN	0	NaN	4874	2902	7772
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7779	23.09	NaN	5308.6	30	0	2756.4	0.033				-1	 	0	60	422.7465736054725	843.4785942777451	2	422.7477111816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4875	2902	7772
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7797	23.127	NaN	67849	30	0	7176.9	0.213			+	26994	LYNSQADGL	9	80	490.73763356028746	979.460714187375	2	490.7391662597656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LYNSQADGL_	REV__ENSG00000171311|ENST00000370902|EXOSC1	112.41091882917199	0.026537921851008135	6				NaN	NaN	0	NaN	4890	2905	7796
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7798	23.13	NaN	46856	30	0	7719.2	0.106				-1	 	0	91	448.246281870282	894.4780108073641	2	448.2474670410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4891	2905	7796
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7799	23.132	NaN	18419	30	0	2054.8	0.106				-1	GMFNLPVSL	9	76	510.26519881684436	1018.5158447004887	2	510.266845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))GMFNLPVSL_	ENSG00000119401|ENST00000450136|TRIM32;TRIM32|p.K604Rfs*21|1|0.05|ENSG00000119401|chr9:116699550-116699551|-/GAGAA|frameshift_variant;TRIM32|p.V379M|1|0.08|ENSG00000119401|chr9:116698877-116698877|G/A|missense_variant	68.78682469695295	0.14603441672067394	6				NaN	NaN	0	NaN	4892	2905	7796
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7800	23.134	NaN	20227	30	0	3565.7	0.106	+			1948	AISVMWKN	8	86	474.7519024728512	947.4892520125024	2	474.7529602050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AISVMWKN_	ENST00000342992.10_3_2:179465685-179466102:-|nuORF	68.484700416344	0.4195245774506064	6				NaN	NaN	0	NaN	4893	2905	7796
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7801	23.136	NaN	21780	30	0	3853.1	0.106				-1	 	0	81	323.20048437027526	644.3864158073505	2	323.2013854980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4894	2905	7796
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7802	23.138	NaN	27939	30	0	7179.8	0.036	+			36018	SEIERQAQV	9	82	530.2727972985274	1058.5310416638547	2	530.2753295898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SEIERQAQV_	ENSG00000149182|ENST00000524782|ARFGAP2;ENST00000395449.7_1_11:47187835-47198404:-|nuORF;nc|ENSG00000149182|Q8N6H7-2|ARFGAP2	109.47833844074708	0.029530294723441826	6				NaN	NaN	0	NaN	4895	2905	7796
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7803	23.138	NaN	33956	30	0	5700.2	0.145				-1	 	0	96	386.24686630093174	1155.7187695029952	3	386.2480773925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4896	2905	7796
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7821	23.177	NaN	14982	30	0	1494.7	0.214			+	34414	RTSWCTTT	8	82	478.21693404550143	954.4193151578029	2	478.21832275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTSWCTTT_	REV__SH3BP4|p.Q622Kfs*114|1|0.42|ENSG00000130147|chr2:235042628-235042628|C/-|frameshift_variant	57.81127852772723	0.5234495074909924	6				NaN	NaN	0	NaN	4911	2908	7820
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7822	23.181	NaN	17933	30	0	1733.2	0.106	+			19201	IYVTMEILS	9	85	534.7860334706997	1067.5575140081994	2	534.7880249023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IYVTMEILS_	ENSG00000047578|ENST00000261588|KATNIP;ENST00000573850.1_1_16:27709674-27761267:+|nuORF	47.91560031466742	0.327412564698279	6				NaN	NaN	0	NaN	4912	2908	7820
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7823	23.183	NaN	21991	30	0	5602	0.106	+			350	AAQDSTDLVAK	11	81	559.7874570247429	1117.5603611162858	2	559.788330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AAQDSTDLVAK_	ENSG00000120438|ENST00000321394|TCP1;ENST00000546204.1_1_6:160200657-160201127:-|nuORF	110.54063921016906	0.03889583772253614	6				NaN	NaN	0	NaN	4913	2908	7820
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7824	23.184	NaN	14179	30	0	1737	0.106	+			27445	MLKIKWKLP	9	85	578.8664665765752	1155.7183802199504	2	578.8684692382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MLKIKWKLP_	HERV1_I-int_dup2|chr3:34679996-34686397:+|1.0948245018220069|0.0565463038051543|4.28|448.0|43|1|sense	66.42927471994793	0.16001998865088202	6				NaN	NaN	0	NaN	4914	2908	7820
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7825	23.186	NaN	5704.3	30	0	1429.8	0.106			+	12197	GAPQSPYV	8	59	409.7060648912443	817.3975768492886	2	409.7073974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GAPQSPYV_	REV__ENSG00000205356|ENST00000447648|TECPR1;REV__nc|ENSG00000205356|Q7Z6L1-2|TECPR1;REV__nc|ENSG00000205356|Q7Z6L1-4|TECPR1;REV__TECPR1|p.R1012Q|1|0.38|ENSG00000205356|chr7:98222415-98222415|C/T|missense_variant	53.351449002276354	0.5676011784961348	6				NaN	NaN	0	NaN	4915	2908	7820
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7826	23.188	NaN	229400	30	0	68352	0.037	+			18794	ITRISYEII	9	129	369.8837731112492	1106.6294899339475	3	369.88519287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ITRISYEII_	tr|U7SWS5|U7SWS5_FUSNUBifunctionalproteinPyrROS=FusobacteriumnucleatumCTI-5OX=1316586GN=pyrRPE=3SV=1	60.11826168202944	0.21262886028301267	6				NaN	NaN	0	NaN	4916	2908	7820
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7827	23.189	NaN	22031	30	0	1813.8	0.141	+			49799	VYSKTQQSF	9	83	544.2749657900196	NaN	0	544.2748413085938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VYSKTQQSF_	ENSG00000143569|ENST00000428931|UBAP2L;ENST00000484819.1_1_1:154238957-154241481:+|nuORF;nc|ENSG00000143569|Q14157-3|UBAP2L;nc|ENSG00000143569|Q14157-5|UBAP2L	74.1650062923329	0.09137789763820878	6				NaN	NaN	0	NaN	4917	2908	7820
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7845	23.228	NaN	583500	30	0	108880	0.118				-1	 	0	90	554.3222880116818	1106.6300230901636	2	554.32373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4932	2911	7844
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7846	23.23	NaN	133140	30	0	21144	0.081			+	50887	YFQCRGTTL	9	104	544.7627284557395	1087.510903978279	2	544.7645263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YFQCRGTTL_	REV__ENSG00000184497|ENST00000375353|TMEM255B	73.97473282117947	0.12360187025703594	6				NaN	NaN	0	NaN	4933	2911	7844
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7847	23.232	NaN	90139	30	0	12019	0.106	+			41315	SVLPRSPADE	10	90	535.7778509026265	1069.5411488720529	2	535.779541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVLPRSPADE_	ENSG00000137501|ENST00000359152|SYTL2;nc|ENSG00000137501|Q9HCH5-13|SYTL2;nc|ENSG00000137501|Q9HCH5-14|SYTL2;nc|ENSG00000137501|Q9HCH5-15|SYTL2;nc|ENSG00000137501|Q9HCH5-6|SYTL2;nc|ENSG00000137501|Q9HCH5|SYTL2;SYTL2|p.Q663Tfs*35|1|0.14|ENSG00000137501|chr11:85709344-85709345|-/T|frameshift_variant	71.87747018426188	0.26198133118427214	6				NaN	NaN	0	NaN	4934	2911	7844
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7848	23.234	NaN	147120	30	0	26513	0.106				-1	 	0	139	374.56781677741196	1120.6816209324359	3	374.5688171386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4935	2911	7844
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7849	23.235	NaN	62610	30	0	10600	0.106				-1	 	0	101	501.319654009587	1000.624755085974	2	501.321044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4936	2911	7844
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7850	23.237	NaN	110830	30	0	27163	0.106			+	33854	RRHDVKVVI	9	102	561.3484443260618	1120.6823357189235	2	561.35009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RRHDVKVVI_	REV__ENST00000538888.5_1_12:123738221-123738578:+|nuORF;REV__nc|ENSG00000130921|Q9H3J6-2|MTRFR	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	4937	2911	7844
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7851	23.239	NaN	39230	30	0	15686	0.036				-1	SVKMWLGPH	9	95	357.52202349531774	NaN	0	357.52197265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_SVKM(Oxidation (M))WLGPH_	SLC24A3|p.E89Sfs*85|1|0.11|ENSG00000185052|chr20:19281079-19281080|-/ATCATTCACAG|frameshift_variant	37.81151784470057	0.28666463014928195	6				NaN	NaN	0	NaN	4938	2911	7844
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7852	23.24	NaN	44102	30	0	29529	0.14	+			28907	NQQARKHL	8	81	332.1892895607449	993.5460392824348	3	332.19036865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_NQQARKHL_	ENSG00000127526|ENST00000595753|SLC35E1;ENST00000409035.1_1_19:16630087-16677465:-|nuORF;nc|ENSG00000127526|Q96K37-2|SLC35E1	30.503639358989545	0.7238069182250283	6				NaN	NaN	0	NaN	4939	2911	7844
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7871	23.278	NaN	25777	30	0	9255	0.214	+			2107	ALGGRGPGGRP	11	86	497.78031407418143	993.5460752151629	2	497.7820739746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ALGGRGPGGRP_	ENSG00000126583|ENST00000263431|PRKCG;nc|ENSG00000126583|P05129-2|PRKCG;PRKCG|p.F614Sfs*41|1|0.2|ENSG00000126583|chr19:53906389-53906389|T/-|frameshift_variant	29.550750289552195	0.6798279264880025	6				NaN	NaN	0	NaN	4955	2914	7870
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7872	23.281	NaN	81889	30	0	27180	0.106				-1	 	0	82	458.77547091870355	915.5363889042071	2	458.7765197753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4956	2914	7870
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7873	23.283	NaN	12339	30	0	1470.3	0.106				-1	 	0	69	435.23867258354386	868.4627922338877	2	435.23968505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4957	2914	7870
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7874	23.285	NaN	11554	30	0	1035.9	0.106	+			1280	AESKGVVKF	9	86	482.775339390787	963.536125848374	2	482.7766418457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AESKGVVKF_	ENSG00000064651|ENST00000262461|SLC12A2;nc|ENSG00000064651|P55011-3|SLC12A2;SLC12A2|p.E1119Rfs*7|1|0.47|ENSG00000064651|chr5:128184417-128184418|-/A|frameshift_variant;SLC12A2|p.F466Lfs*59|1|0.11|ENSG00000064651|chr5:128135793-128135793|T/-|frameshift_variant;SLC12A2|p.P1171Sfs*18|1|0.38|ENSG00000064651|chr5:128186498-128186499|-/TC|frameshift_variant	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	4958	2914	7870
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7875	23.287	NaN	24139	30	0	2842.2	0.106	+			37203	SKEIIIQK	8	91	479.799092554018	957.583632174836	2	479.7998352050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SKEIIIQK_	ENSG00000189325|ENST00000437635|BNIP5	190.51785368661015	0.06186312751012144	6				NaN	NaN	0	NaN	4959	2914	7870
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7876	23.289	NaN	13354	30	0	2262.6	0.035	+			40153	STQNGPVFAK	10	84	524.7757522285893	1047.5369515239786	2	524.7766723632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STQNGPVFAK_	ENSG00000099942|ENST00000354336|CRKL	53.08895987439943	0.42869529153390606	6				NaN	NaN	0	NaN	4960	2914	7870
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7877	23.289	NaN	9594.6	30	0	2796.8	0.139				-1	 	0	68	384.7708094433111	767.5270659534223	2	384.772216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	4961	2914	7870
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7895	23.329	NaN	9899.5	30	0	1624.8	0.214	+			50678	YEEEVKKTL	9	83	569.8013016178622	1137.5880503025244	2	569.803955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YEEEVKKTL_	ECHDC1|p.N109Ifs*9|1|0.19|ENSG00000093144|chr6:127327057-127327057|T/-|frameshift_variant;ECHDC1|p.N222Mfs*3|1|0.46|ENSG00000093144|chr6:127290128-127290128|T/-|frameshift_variant;ENSG00000093144|ENST00000454859|ECHDC1;ENST00000368287.1_1_6:127648134-127664493:-|nuORF;nc|ENSG00000093144|Q9NTX5-5|ECHDC1;nc|ENSG00000093144|Q9NTX5-6|ECHDC1;nc|ENSG00000093144|Q9NTX5|ECHDC1	101.45984612302182	0.0377122763612125	6				NaN	NaN	0	NaN	4976	2917	7894
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7896	23.332	NaN	12506	30	0	960.01	0.106	+			19754	KDVNQQEF	8	75	504.2426746812088	1006.4707964292177	2	504.2436218261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KDVNQQEF_	ENSG00000105372|ENST00000598742|RPS19	96.0336014099291	0.25920480862606965	6				NaN	NaN	0	NaN	4977	2917	7894
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7897	23.334	NaN	7812.1	30	0	617.84	0.106				-1	TACRLLELY	9	69	380.20476513778135	NaN	0	380.20477294921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_TAC(Carbamidomethyl (C))RLLELY_	ENST00000378024.8_2_11:62284032-62284200:-|nuORF	28.081489160057373	0.33578952234132536	6				NaN	NaN	0	NaN	4978	2917	7894
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7898	23.336	NaN	6628.5	30	0	974.38	0.106			+	33224	RFQYPCGP	8	71	484.22642982680327	966.4383067204066	2	484.22772216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RFQYPCGP_	REV__ENSG00000160145|ENST00000682506|KALRN;REV__nc|ENSG00000160145|O60229-4|KALRN;REV__nc|ENSG00000160145|O60229-6|KALRN;REV__nc|ENSG00000160145|O60229|KALRN	37.028477286268924	0.6747514403204248	6				NaN	NaN	0	NaN	4979	2917	7894
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7899	23.338	NaN	18509	30	0	2192.8	0.106	+			33553	RLFGKKQM	8	83	336.5344378546052	NaN	0	336.5343322753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RLFGKKQM_	ENSG00000168374|ENST00000303436|ARF4;ENST00000483848.5_1_3:57563094-57582900:-|nuORF;ENST00000489843.1_1_3:57563094-57582900:-|nuORF;ENST00000493378.1_1_3:57569737-57582900:-|nuORF	35.200714571348534	1.7418937515398478	6				NaN	NaN	0	NaN	4980	2917	7894
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7900	23.34	NaN	15564	30	0	1805.7	0.037	+			28652	NLKNDLNEK	9	100	363.19645871895415	1086.5675467570625	3	363.1977844238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NLKNDLNEK_	tr|U7SM68|U7SM68_FUSNUOutermembraneproteinTolCOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02098PE=3SV=1	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	4981	2917	7894
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7901	23.34	NaN	7195.5	30	0	683.07	0.141				-1	KEEMVRRL	8	74	538.7992049933665	1075.583857053533	2	538.8016357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_KEEM(Oxidation (M))VRRL_	ENSG00000083642|ENST00000315596|PDS5B;ENST00000466078.1_1_13:33222909-33223050:+|nuORF;ENST00000493653.1_1_13:33222909-33226198:+|nuORF;ENST00000498550.5_1_13:33222909-33262824:+|nuORF;nc|ENSG00000083642|Q9NTI5-2|PDS5B;nc|ENSG00000083642|Q9NTI5-3|PDS5B;nc|ENSG00000083642|Q9NTI5-4|PDS5B;PDS5B|p.G721Dfs*35|1|0.13|ENSG00000083642|chr13:32732132-32732132|A/-|frameshift_variant;PDS5B|p.K1268Rfs*8|1|0.07|ENSG00000083642|chr13:32770296-32770296|A/-|frameshift_variant;PDS5B|p.K1287Rfs*22|1|0.26|ENSG00000083642|chr13:32770351-32770351|A/-|frameshift_variant;PDS5B|p.K693Qfs*8|1|0.11|ENSG00000083642|chr13:32710054-32710055|-/T|frameshift_variant;PDS5B|p.L69Sfs*12|1|0.18|ENSG00000083642|chr13:32651893-32651893|T/-|frameshift_variant;PDS5B|p.N1390Cfs*12|1|0.44|ENSG00000083642|chr13:32770750-32770751|AA/-|frameshift_variant;PDS5B|p.S1198Vfs*10|1|0.28|ENSG00000083642|chr13:32764556-32764556|A/-|frameshift_variant	42.396135135203025	0.6414440140393314	6				NaN	NaN	0	NaN	4982	2917	7894
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7919	23.38	NaN	401000	30	0	41262	0.13			+	44434	TSLTDWLKH	9	92	550.7898200282029	1099.5650871232058	2	550.7919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSLTDWLKH_	REV__ENST00000551046.5_1_14:105452161-105455990:+|nuORF	108.08749611321984	0.03094949498378333	6				NaN	NaN	0	NaN	4997	2920	7918
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7920	23.382	NaN	60804	30	0	8209.3	0.106	+			49396	VVTEHLINK	9	99	526.8078595811318	1051.6011662290634	2	526.808837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVTEHLINK_	ENSG00000036257|ENST00000264414|CUL3;nc|ENSG00000036257|Q13618-2|CUL3	190.62248201133156	0.00022967542297918066	6				NaN	NaN	0	NaN	4998	2920	7918
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7921	23.384	NaN	14573	30	0	1748.1	0.106	+			33519	RKRSNGKK	8	70	487.3042523113476	972.5939516894953	2	487.3053894042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RKRSNGKK_	ENST00000598953.1_1_19:52264477-52266695:+|nuORF	79.45101966838831	0.3281480470254892	6				NaN	NaN	0	NaN	4999	2920	7918
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7922	23.386	NaN	34162	30	0	15602	0.106	+			49397	VVTEHLINK	9	83	351.54141844101594	NaN	0	351.5413818359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVTEHLINK_	ENSG00000036257|ENST00000264414|CUL3;nc|ENSG00000036257|Q13618-2|CUL3	70.8162118820467	0.10318768208603292	6				NaN	NaN	0	NaN	5000	2920	7918
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7923	23.388	NaN	47843	30	0	8304.4	0.106				-1	 	0	89	481.76554281814504	961.5165327030901	2	481.7668151855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5001	2920	7918
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7924	23.389	NaN	17317	30	0	4025.6	0.106			+	42418	TAKSEELNLI	10	94	373.2084535887469	1116.6035313664408	3	373.2098083496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TAKSEELNLI_	REV__ENSG00000159197|ENST00000290310|KCNE2	34.172542307311794	0.6007644933930345	6				NaN	NaN	0	NaN	5002	2920	7918
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7925	23.391	NaN	6059.5	30	0	398.59	0.035	+			20447	KEVDVSKQL	9	77	523.2971074939884	1044.5796620547767	2	523.2982788085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KEVDVSKQL_	ENSG00000128944|ENST00000249776|KNSTRN;ENST00000560220.5_1_15:40676698-40685795:+|nuORF;ENST00000560673.1_1_15:40675453-40678696:+|nuORF;nc|ENSG00000128944|Q9Y448-2|KNSTRN;nc|ENSG00000128944|Q9Y448-3|KNSTRN	85.86182877749512	0.07653218437724067	6				NaN	NaN	0	NaN	5003	2920	7918
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7943	23.429	NaN	191280	30	0	19829	0.16			+	24053	LEHNCLTW	8	93	508.23688642456665	1014.4592199159333	2	508.2381591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LEHNCLTW_	REV__ENSG00000187806|ENST00000341689|TMEM202	88.64286706044652	0.2815785716369046	6				NaN	NaN	0	NaN	5018	2923	7942
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7944	23.431	NaN	48379	30	0	7850.8	0.106				-1	 	0	109	472.7966940705282	943.5788352078564	2	472.7978210449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5019	2923	7942
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7945	23.433	NaN	35514	30	0	15142	0.106	+			45461	TYAEKLHRL	9	81	377.54882355444084	NaN	0	377.5487976074219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TYAEKLHRL_	DST|p.K5076Nfs*24|1|0.31|ENSG00000151914|chr6:56472218-56472218|T/-|frameshift_variant;DST|p.L1539Ffs*11|1|0.39|ENSG00000151914|chr6:56611525-56611526|-/A|frameshift_variant;DST|p.N1220Tfs*9|1|0.23|ENSG00000151914|chr6:56630354-56630354|T/-|frameshift_variant;DST|p.T4428Nfs*23|1|0.12|ENSG00000151914|chr6:56497896-56497897|-/T|frameshift_variant;ENSG00000151914|ENST00000680361|DST;ENST00000521104.1_1_6:56504020-56557947:-|nuORF;ENST00000523967.5_1_6:56504020-56716372:-|nuORF;nc|ENSG00000151914|Q03001-13|DST;nc|ENSG00000151914|Q03001-14|DST;nc|ENSG00000151914|Q03001-3|DST;nc|ENSG00000151914|Q03001-8|DST;nc|ENSG00000151914|Q03001-9|DST;nc|ENSG00000151914|Q03001|DST	64.20726635412375	0.13137488984569443	6				NaN	NaN	0	NaN	5020	2923	7942
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7946	23.435	NaN	33225	30	0	6321.9	0.106				-1	MPLYSPPSY	9	92	535.7473591095791	1069.480165285958	2	535.7491455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_M(Oxidation (M))PLYSPPSY_	ENST00000374619.1_1_1:23520486-23520591:-|nuORF	55.50420428727701	0.2510918378945873	6				NaN	NaN	0	NaN	5021	2923	7942
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7947	23.437	NaN	54615	30	0	37569	0.106	+			325	AAPSAAREL	9	82	443.2430062967269	NaN	0	443.2428283691406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AAPSAAREL_	ENSG00000107960|ENST00000224950|STN1	109.47833844074708	0.010168233843482827	6				NaN	NaN	0	NaN	5022	2923	7942
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7948	23.439	NaN	5788.1	30	0	2027.8	0.106	+			8731	EEERKEQRGQ	10	73	644.8153317432633	1287.6161105533265	2	644.8171997070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EEERKEQRGQ_	ENST00000307126.9_1_6:43594680-43596795:-|nuORF	25.57405402267927	0.6709832231498071	6				NaN	NaN	0	NaN	5023	2923	7942
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7949	23.441	NaN	14584	30	0	880.1	0.037			+	45466	TYALYKMKL	9	89	565.8168340186952	1129.6191151041903	2	565.8197631835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TYALYKMKL_	REV__tr|U7T6G7|U7T6G7_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00229PE=4SV=1	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	5024	2923	7942
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7967	23.477	NaN	74522	30	0	38331	0.214				-1	 	0	64	398.22031236360124	794.4260717940025	2	398.2217102050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5039	2926	7966
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7968	23.481	NaN	21163	30	0	11959	0.106	+			36979	SIMSSHVMK	9	74	340.5041161687965	1018.4905191065895	3	340.50537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SIMSSHVMK_	ENSG00000159140|ENST00000356577|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-4|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-6|SON;nc|ENSG00000159140|P18583-7|SON;nc|ENSG00000159140|P18583-9|SON	56.43379154798735	0.2433427591689151	6				NaN	NaN	0	NaN	5040	2926	7966
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7969	23.483	NaN	73270	30	0	13337	0.106				-1	 	0	93	439.25176464562435	876.4889763580487	2	439.2532043457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5041	2926	7966
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7970	23.485	NaN	13528	30	0	1139.7	0.106	+			12782	GELSKVTKV	9	88	480.78891690220524	959.5632808712105	2	480.7900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GELSKVTKV_	ENSG00000119421|ENST00000373768|NDUFA8	83.6470233535746	0.08277643980271215	6				NaN	NaN	0	NaN	5042	2926	7966
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7971	23.487	NaN	25742	30	0	10438	0.106	+			48192	VTAKDVTRESG	11	69	388.2072637048298	1161.5999617146895	3	388.2084655761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTAKDVTRESG_	ENSG00000123505|ENST00000368885|AMD1;nc|ENSG00000123505|P17707-2|AMD1	45.908116695636124	0.4771019740774998	6				NaN	NaN	0	NaN	5043	2926	7966
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7972	23.488	NaN	68639	30	0	17611	0.034				-1	 	0	94	465.2035912126323	928.3926294920647	2	465.20538330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5044	2926	7966
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7973	23.489	NaN	15369	30	0	2510.9	0.139	+			13572	GLTNYAATY	9	75	487.2351686521471	972.4557843710942	2	487.2366943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GLTNYAATY_	ENST00000465511.1_1_11:118431647-118432142:+|nuORF	82.24051045832904	0.08786059719216216	6				NaN	NaN	0	NaN	5045	2926	7966
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7991	23.528	NaN	85110	30	0	16751	0.214			+	17065	HREKLVAR	8	102	504.80631555607255	1007.5980781789451	2	504.8077392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HREKLVAR_	REV__ENSG00000167110|ENST00000611957|GOLGA2;REV__GOLGA2|p.Y989Lfs*4|1|0.29|ENSG00000167110|chr9:128257110-128257111|-/A|frameshift_variant;REV__GOLGA2|p.Y989Tfs*9|1|0.35|ENSG00000167110|chr9:128257111-128257111|A/-|frameshift_variant;REV__nc|ENSG00000167110|Q08379-2|GOLGA2;REV__nc|ENSG00000167110|Q08379|GOLGA2	66.42927471994793	0.4381325844043345	6				NaN	NaN	0	NaN	5060	2929	7990
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7992	23.532	NaN	30107	30	0	7605.7	0.106				-1	 	0	78	443.75174181716	885.48893070112	2	443.7528991699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5061	2929	7990
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7993	23.534	NaN	48217	30	0	10800	0.106			+	-1	LCNVSIFVKAE	11	92	640.3394368034112	1278.6643206736223	2	640.3412475585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LC(Carbamidomethyl (C))NVSIFVKAE_	REV__ENSG00000134317|ENST00000324907|GRHL1;REV__nc|ENSG00000134317|Q9NZI5-2|GRHL1;REV__nc|ENSG00000134317|Q9NZI5-3|GRHL1	47.95952297671804	0.44903247279694136	6				NaN	NaN	0	NaN	5062	2929	7990
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7994	23.536	NaN	13742	30	0	1315.2	0.106	+			13212	GIFKAYIQR	9	96	548.3189266919684	1094.6233004507367	2	548.3209228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GIFKAYIQR_	ENSG00000064419|ENST00000265388|TNPO3;nc|ENSG00000064419|Q9Y5L0-1|TNPO3;nc|ENSG00000064419|Q9Y5L0-3|TNPO3;nc|ENSG00000064419|Q9Y5L0-5|TNPO3;TNPO3|p.N628Mfs*22|1|0.13|ENSG00000064419|chr7:128980008-128980008|T/-|frameshift_variant	44.116797842482775	0.37197099687881774	6				NaN	NaN	0	NaN	5063	2929	7990
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7995	23.538	NaN	22867	30	0	5086.4	0.106			+	41740	SVSIREGNRL	10	87	565.8168340186952	1129.6191151041903	2	566.3179931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVSIREGNRL_	REV__ENSG00000204264|ENST00000374882|PSMB8;REV__nc|ENSG00000204264|P28062-2|PSMB8	48.601550744091256	0.46988609897316763	6				NaN	NaN	0	NaN	5064	2929	7990
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7996	23.539	NaN	20091	30	0	2751.3	0.035	+			27473	MLSEDPWR	8	87	517.2417676551743	1032.4689823771484	2	517.2434692382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MLSEDPWR_	ENSG00000275410|ENST00000617811|HNF1B;nc|ENSG00000275410|P35680-2|HNF1B;nc|ENSG00000275410|P35680-3|HNF1B	76.84663266511073	0.3498490246073164	6				NaN	NaN	0	NaN	5065	2929	7990
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	7997	23.54	NaN	18855	30	0	1978.7	0.145				-1	 	0	108	381.2035457485681	1140.5888078459043	3	381.2047119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5066	2929	7990
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8014	23.578	NaN	57234	30	0	5931.5	0.214	+			48015	VSQVGKEL	8	85	430.2467106471213	858.4788683610426	2	430.24774169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSQVGKEL_	ENSG00000168209|ENST00000307365|DDIT4	158.07458414430337	0.10774029380883422	6				NaN	NaN	0	NaN	5080	2932	8013
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8015	23.582	NaN	26150	30	0	4140.3	0.106	+			17679	IEKQKSVYI	9	97	369.8837731112492	1106.6294899339475	3	369.88494873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IEKQKSVYI_	SF3B3|p.L140S|1|0.13|ENSG00000189091|chr16:70530766-70530766|T/C|missense_variant	51.19269402634007	0.2889735674168909	6				NaN	NaN	0	NaN	5081	2932	8013
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8016	23.584	NaN	20406	30	0	5840.8	0.106	+			31447	QKRSSGLKN	9	91	509.2940215552272	1016.5734901772544	2	509.2956848144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QKRSSGLKN_	ENSG00000197619|ENST00000598071|ZNF615;nc|ENSG00000197619|Q8N8J6-3|ZNF615;nc|ENSG00000197619|Q8N8J6|ZNF615;ZNF615|p.T281Lfs*103|1|0.3|ENSG00000197619|chr19:51994235-51994235|T/-|frameshift_variant	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	5082	2932	8013
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8017	23.586	NaN	10605	30	0	1929.5	0.106			+	29833	PKVGHEMI	8	69	455.74420234244474	NaN	0	455.7442932128906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PKVGHEMI_	REV__ENSG00000115464|ENST00000398571|USP34;REV__ENST00000463046.5_1_2:61439047-61463244:-|nuORF;REV__nc|ENSG00000115464|Q70CQ2-2|USP34;REV__nc|ENSG00000115464|Q70CQ2-3|USP34;REV__USP34|p.L2716Sfs*30|1|0.05|ENSG00000115464|chr2:61214596-61214597|-/AAGCTGA|frameshift_variant;REV__USP34|p.L3228*|1|0.22|ENSG00000115464|chr2:61190564-61190564|A/-|frameshift_variant	50.0245360154114	1.7418937515398478	6				NaN	NaN	0	NaN	5083	2932	8013
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8018	23.587	NaN	14768	30	0	2379.8	0.106			+	48588	VTQPPPEMNVI	11	86	414.214173839321	1239.620692118163	3	414.2159423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_VTQPPPEM(Oxidation (M))NVI_	REV__ENSG00000163629|ENST00000411767|PTPN13;REV__nc|ENSG00000163629|Q12923-3|PTPN13;REV__nc|ENSG00000163629|Q12923-4|PTPN13;REV__PTPN13|p.K1535Sfs*16|1|0.38|ENSG00000163629|chr4:86769879-86769879|A/-|frameshift_variant;REV__PTPN13|p.N1374Mfs*7|1|0.15|ENSG00000163629|chr4:86764692-86764692|A/-|frameshift_variant;REV__PTPN13|p.T2330Qfs*13|1|0.12|ENSG00000163629|chr4:86807799-86807799|A/-|frameshift_variant	61.76455937419982	0.30770400073182314	6				NaN	NaN	0	NaN	5084	2932	8013
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8019	23.589	NaN	12823	30	0	6397.8	0.036	+			18630	ISTEDLVLK	9	58	339.8654856793453	1016.5746276382358	3	339.8661804199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ISTEDLVLK_	ENSG00000141639|ENST00000400384|MAPK4	31.954861631926434	0.5046124803899898	6				NaN	NaN	0	NaN	5085	2932	8013
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8020	23.59	NaN	12205	30	0	3270.5	0.139	+			18711	ITEREAEP	8	85	472.7381550406901	NaN	0	472.73773193359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ITEREAEP_	ATG5|p.K235Rfs*4|1|0.33|ENSG00000057663|chr6:106186664-106186664|T/-|frameshift_variant;ATG5|p.N236Efs*9|1|0.28|ENSG00000057663|chr6:106186663-106186664|-/T|frameshift_variant;ENSG00000057663|ENST00000369076|ATG5	73.97473282117947	1.7418937515398478	6				NaN	NaN	0	NaN	5086	2932	8013
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8037	23.628	NaN	70976	30	0	6254.2	0.172	+			33991	RSGLQRGKK	9	106	515.317279576497	1028.6200062197938	2	515.3187866210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RSGLQRGKK_	nc|ENSG00000121481|Q99496-2|RNF2	68.84614121027924	0.14577793175421136	6				NaN	NaN	0	NaN	5100	2935	8036
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8038	23.631	NaN	93242	30	0	18757	0.106				-1	 	0	101	503.7549651528061	1005.4953773724122	2	503.756103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5101	2935	8036
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8039	23.633	NaN	44503	30	0	6462	0.106	+			1445	AEYSTKNNAL	10	97	555.7753843842662	NaN	0	555.7752685546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEYSTKNNAL_	ENSG00000129128|ENST00000503362|SPCS3;ENST00000507678.5_1_4:177243228-177249478:+|nuORF;ENST00000513139.1_1_4:177241188-177248429:+|nuORF	101.45984612302182	0.010523654147385104	6				NaN	NaN	0	NaN	5102	2935	8036
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8040	23.635	NaN	54415	30	0	5551.3	0.106	+			44645	TTFTKIVNK	9	104	526.3112331058653	NaN	0	526.3113403320312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TTFTKIVNK_	ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1670Tfs*23|1|0.29|ENSG00000174231|chr17:1659487-1659487|C/-|frameshift_variant	163.1509380574825	0.013195146407114593	6				NaN	NaN	0	NaN	5103	2935	8036
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8041	23.636	NaN	69869	30	0	5564.4	0.106			+	-1	LMELCDWWWEV	11	96	791.8385395746615	1581.6625262161228	2	791.84033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C),Oxidation (M)	_LM(Oxidation (M))ELC(Carbamidomethyl (C))DWWWEV_	REV__ARID1A|p.F2141Sfs*59|5|0.26|ENSG00000117713|chr1:26780313-26780313|C/-|frameshift_variant;REV__ARID1A|p.P2114Rfs*21|1|0.46|ENSG00000117713|chr1:26780236-26780236|C/-|frameshift_variant;REV__ARID1A|p.V2244Gfs*34|1|0.31|ENSG00000117713|chr1:26780626-26780627|-/G|frameshift_variant;REV__ENSG00000117713|ENST00000324856|ARID1A;REV__nc|ENSG00000117713|O14497-2|ARID1A;REV__nc|ENSG00000117713|O14497-3|ARID1A	25.57405402267927	0.7215402271931856	6				NaN	NaN	0	NaN	5104	2935	8036
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8042	23.638	NaN	24338	30	0	5119.4	0.106	+			17619	IEHLIGKKL	9	101	350.89264858009307	1049.6561163404792	3	350.8938293457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IEHLIGKKL_	DDX47|p.R377H|1|0.32|ENSG00000213782|chr12:12827269-12827269|G/A|missense_variant;ENSG00000213782|ENST00000358007|DDX47;nc|ENSG00000213782|Q9H0S4-2|DDX47	72.87924865735499	0.12833875048249987	6				NaN	NaN	0	NaN	5105	2935	8036
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8043	23.64	NaN	29052	30	0	12562	0.033				-1	 	0	69	420.6891219369808	839.3636909407617	2	420.6900939941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5106	2935	8036
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8061	23.676	NaN	28492	30	0	4269	0.213	+			10517	EVYAGSHQY	9	101	527.2358210302016	NaN	0	527.23583984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EVYAGSHQY_	ENSG00000182827|ENST00000366812|ACBD3	124.08010499294276	0.0015010289275841425	6				NaN	NaN	0	NaN	5121	2938	8060
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8062	23.68	NaN	24226	30	0	11655	0.106				-1	 	0	83	470.7445361430214	939.4745193528428	2	470.7457275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5122	2938	8060
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8063	23.682	NaN	27830	30	0	5594.6	0.106	+			43127	TERPQPQTL	9	82	535.2842617354376	1068.553970537675	2	535.28564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TERPQPQTL_	ENSG00000104671|ENST00000221114|DCTN6	105.16503226865211	0.03393154504579365	6				NaN	NaN	0	NaN	5123	2938	8060
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8064	23.684	NaN	23414	30	0	3582.8	0.106				-1	 	0	66	436.24649091921816	870.4784289052363	2	436.2477111816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5124	2938	8060
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8065	23.686	NaN	17948	30	0	3029.2	0.106	+			17655	IEKFDKSKL	9	91	369.8837731112492	1106.6294899339475	3	370.2218017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IEKFDKSKL_	ENSG00000154620|ENST00000284856|TMSB4Y;ENSG00000205542|ENST00000451311|TMSB4X;ENST00000323496.5_1_9:131104444-131104642:+|nuORF;TMSB4X|p.A8V|1|0.09|ENSG00000205542|chrX:12976284-12976284|C/T|missense_variant	61.691277971877994	0.19951612995419254	6				NaN	NaN	0	NaN	5125	2938	8060
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8066	23.688	NaN	28503	30	0	5868.5	0.037			+	9527	ELANTLEDPQ	10	85	565.2720025019366	1128.5294520706732	2	565.2740478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ELANTLEDPQ_	REV__CACNA1G|p.E769D|1|0.36|ENSG00000006283|chr17:50590476-50590476|G/T|missense_variant	93.1432384553994	0.11307820852620741	6				NaN	NaN	0	NaN	5126	2938	8060
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8067	23.688	NaN	11418	30	0	4625.9	0.14				-1	 	0	71	490.2625254793046	978.5104980254092	2	490.26397705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5127	2938	8060
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8085	23.726	NaN	52747	30	0	3484	0.151			+	33571	RLHRRGTN	8	97	505.2915936869975	1008.568634440795	2	505.29315185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RLHRRGTN_	REV__ENST00000434837.7_1_6:37664674-37664983:-|nuORF	42.396135135203025	0.6414440140393314	6				NaN	NaN	0	NaN	5142	2941	8084
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8086	23.728	NaN	50314	30	0	12938	0.106			+	13898	GRGKHKQK	8	89	469.78551225599057	937.5564715787812	2	469.78668212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GRGKHKQK_	REV__ENSG00000187109|ENST00000618691|NAP1L1;REV__ENSG00000205531|ENST00000380542|NAP1L4;REV__ENST00000528363.5_1_11:2975753-2985939:-|nuORF;REV__nc|ENSG00000187109|P55209-2|NAP1L1;REV__nc|ENSG00000187109|P55209-3|NAP1L1;REV__nc|ENSG00000205531|Q99733-2|NAP1L4	47.91560031466742	0.6071945918984287	6				NaN	NaN	0	NaN	5143	2941	8084
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8087	23.73	NaN	44674	30	0	21363	0.106			+	19586	KDDLHFQDV	9	82	558.7695802472931	1115.5246075613861	2	558.771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KDDLHFQDV_	REV__ENSG00000196335|ENST00000355870|STK31;REV__nc|ENSG00000196335|Q9BXU1-2|STK31;REV__STK31|p.P983Qfs*16|1|0.32|ENSG00000196335|chr7:23832252-23832252|C/-|frameshift_variant	87.69643885390035	0.07135982304947239	6				NaN	NaN	0	NaN	5144	2941	8084
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8088	23.732	NaN	27276	30	0	3194	0.106	+			41662	SVRKSRKQ	8	92	494.80392146969393	987.5932900061879	2	494.8052062988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVRKSRKQ_	ENSG00000150995|ENST00000649015|ITPR1;ITPR1|p.A1202V|1|0.28|ENSG00000150995|chr3:4685109-4685109|C/T|missense_variant;nc|ENSG00000150995|Q14643-2|ITPR1;nc|ENSG00000150995|Q14643-3|ITPR1;nc|ENSG00000150995|Q14643-4|ITPR1;nc|ENSG00000150995|Q14643-5|ITPR1;nc|ENSG00000150995|Q14643-6|ITPR1;nc|ENSG00000150995|Q14643-7|ITPR1;nc|ENSG00000150995|Q14643-8|ITPR1	49.44154591367651	0.597725784090933	6				NaN	NaN	0	NaN	5145	2941	8084
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8089	23.734	NaN	7597.1	30	0	1034.5	0.106			+	15473	GVAELLRQNQ	10	69	585.3175813438847	1168.6206097545694	2	585.3193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))GVAELLRQNQ_	REV__ARHGEF15|p.R820H|1|0.47|ENSG00000198844|chr17:8320926-8320926|G/A|missense_variant;REV__ENSG00000198844|ENST00000361926|ARHGEF15	52.936696900407355	0.4300801048568001	6				NaN	NaN	0	NaN	5146	2941	8084
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8090	23.736	NaN	31069	30	0	9865	0.106			+	37128	SITRLAHDMMT	11	88	638.3126091555015	1274.610665377803	2	638.314208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SITRLAHDMMT_	REV__APBA2|p.G693Afs*24|1|0.53|ENSG00000034053|chr15:29113912-29113912|G/-|frameshift_variant;REV__ENSG00000034053|ENST00000683413|APBA2;REV__ENST00000382938.3_1_15:29363239-29394119:+|nuORF;REV__ENST00000559814.5_1_15:29346087-29400775:+|nuORF;REV__nc|ENSG00000034053|Q99767-2|APBA2	31.529811441608018	0.6590691889962369	6				NaN	NaN	0	NaN	5147	2941	8084
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8091	23.738	NaN	20227	30	0	1907.4	0.035	+			50180	WLKCVSLK	8	91	488.785844168579	975.557135403958	2	488.78692626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_WLKCVSLK_	ENSG00000165572|ENST00000379485|KBTBD6;KBTBD6|p.C613Afs*34|1|0.51|ENSG00000165572|chr13:41130675-41130675|A/-|frameshift_variant	65.46538089061403	0.44767499471257033	6				NaN	NaN	0	NaN	5148	2941	8084
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8109	23.773	NaN	42717	30	0	8208.2	0.214				-1	 	0	97	465.7236267743301	929.4327006154602	2	465.7248229980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5163	2944	8108
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8110	23.777	NaN	41888	30	0	14648	0.106	+			28575	NKIEENHLN	9	93	370.856296289991	1109.547059470173	3	370.8575134277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NKIEENHLN_	tr|U7T216|U7T216_FUSNUTIGR03545familyproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00432PE=4SV=1	32.81241826257853	0.4965981579233955	6				NaN	NaN	0	NaN	5164	2944	8108
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8111	23.779	NaN	38887	30	0	14175	0.106				-1	 	0	85	332.8650220978195	995.5732368936585	3	332.8660583496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5165	2944	8108
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8112	23.781	NaN	12205	30	0	2082.2	0.106				-1	 	0	81	361.9036370201605	1082.6890816606815	3	361.90472412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5166	2944	8108
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8113	23.783	NaN	37587	30	0	6178.7	0.106			+	25734	LRSVHDWHIDM	11	93	704.843010081766	1407.671467230332	2	704.8448486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LRSVHDWHIDM_	REV__ENSG00000124302|ENST00000650847|CHST8	45.97224482568171	0.4762245054624163	6				NaN	NaN	0	NaN	5167	2944	8108
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8114	23.784	NaN	9211.1	30	0	1293.5	0.036			+	1457	AFEQNNFIK	9	81	555.7813058954356	1109.548058857671	2	555.7823486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AFEQNNFIK_	REV__ENSG00000113658|ENST00000545279|SMAD5;REV__ENSG00000166949|ENST00000327367|SMAD3;REV__ENSG00000170365|ENST00000302085|SMAD1;REV__ENSG00000175387|ENST00000262160|SMAD2;REV__nc|ENSG00000166949|P84022-2|SMAD3;REV__nc|ENSG00000166949|P84022-3|SMAD3;REV__nc|ENSG00000166949|P84022-4|SMAD3;REV__nc|ENSG00000175387|Q15796-2|SMAD2;REV__SMAD3|p.L340P|1|0.31|ENSG00000166949|chr15:67187374-67187374|T/C|missense_variant	51.19269402634007	0.2889735674168909	6				NaN	NaN	0	NaN	5168	2944	8108
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8115	23.785	NaN	17961	30	0	3957.9	0.145	+			47157	VLSESVQVEK	10	93	373.2084535887469	1116.6035313664408	3	373.20977783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VLSESVQVEK_	ENSG00000118898|ENST00000345988|PPL;PPL|p.K1530Gfs*18|1|0.27|ENSG00000118898|chr16:4884058-4884068|GCTCGCGCTTG/-|frameshift_variant	32.81241826257853	0.6118718159329168	6				NaN	NaN	0	NaN	5169	2944	8108
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8133	23.823	NaN	150120	30	0	45298	0.186	+			20079	KEKGNKSGAQ	10	132	349.52483158260503	1045.5526653480151	3	349.52581787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEKGNKSGAQ_	CCDC153|p.K10N|1|0.43|ENSG00000248712|chr11:119195458-119195458|C/A|missense_variant	42.396135135203025	0.5270658956260207	6				NaN	NaN	0	NaN	5184	2947	8132
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8134	23.826	NaN	92854	30	0	14401	0.106				-1	 	0	97	404.87556956374783	1211.6048792914435	3	404.87677001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5185	2947	8132
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8135	23.828	NaN	23900	30	0	4312.9	0.106	+			15183	GTSITVPQK	9	89	465.7646296608374	929.5147063884748	2	465.76629638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTSITVPQK_	ENSG00000134851|ENST00000381334|TMEM165;ENST00000508404.5_1_4:56269487-56291616:+|nuORF;nc|ENSG00000134851|Q9HC07-2|TMEM165;TMEM165|p.L309Wfs*10|1|0.25|ENSG00000134851|chr4:55425397-55425397|T/-|frameshift_variant	47.95952297671804	0.32689736945648856	6				NaN	NaN	0	NaN	5186	2947	8132
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8136	23.83	NaN	8779.1	30	0	1733	0.106			+	17468	ICLRVRFT	8	69	336.5344378546052	NaN	0	336.5342712402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ICLRVRFT_	REV__ENST00000485560.5_3_10:38146171-38146261:-|nuORF	30.503639358989545	1.7418937515398478	6				NaN	NaN	0	NaN	5187	2947	8132
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8137	23.832	NaN	35120	30	0	14560	0.106	+			22051	KSIWLCMMKT	10	95	414.21326274911337	NaN	0	414.21112060546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KSIWLCMMKT_	ENST00000590519.2_1_19:33149896-33166702:-|nuORF	37.59989570853033	0.37671638597750867	6				NaN	NaN	0	NaN	5188	2947	8132
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8138	23.834	NaN	5114.3	30	0	384.6	0.106	+			12527	GEFEKKYVAT	10	85	586.3026206120652	1170.5906882909303	2	586.303955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GEFEKKYVAT_	ENSG00000132341|ENST00000543796|RAN	59.93077597824379	0.36646980200755325	6				NaN	NaN	0	NaN	5189	2947	8132
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8139	23.836	NaN	15588	30	0	1867.2	0.034			+	26565	LTSSRRPR	8	77	486.78832837760035	971.5621038220007	2	486.78961181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LTSSRRPR_	REV__nc|ENSG00000120949|P28908-3|TNFRSF8	71.29570347882199	0.39610197767395533	6				NaN	NaN	0	NaN	5190	2947	8132
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8157	23.873	NaN	44674	30	0	6582.3	0.214				-1	 	0	97	332.2053611618198	993.5942540856594	3	332.2063903808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5205	2950	8156
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8158	23.877	NaN	17453	30	0	1374.7	0.106	+			1017	AEKLGETEKL	10	87	559.3079818905766	1116.601410847953	2	559.309326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEKLGETEKL_	ENSG00000182481|ENST00000330459|KPNA2;ENST00000578492.5_1_17:62746826-62750158:-|nuORF	147.73206827945663	0.008898223230177705	6				NaN	NaN	0	NaN	5206	2950	8156
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8159	23.879	NaN	18245	30	0	1836.1	0.106	+			23836	LCVNRQCKN	9	87	539.2685100837418	1076.5224672342836	2	539.2703857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LCVNRQCKN_	LTBP1|p.G1092R|1|0.19|ENSG00000049323|chr2:33300489-33300489|G/A|missense_variant	49.44154591367651	0.3095138337212152	6				NaN	NaN	0	NaN	5207	2950	8156
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8160	23.881	NaN	16918	30	0	1634.6	0.106	+			28156	NALNHTEQY	9	83	545.2508251549641	1088.4870973767281	2	545.2525024414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NALNHTEQY_	ENSG00000146281|ENST00000275072|PM20D2	95.81516180277367	0.04847050768394289	6				NaN	NaN	0	NaN	5208	2950	8156
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8161	23.883	NaN	7889.3	30	0	587.89	0.106			+	-1	VKSCVFDVL	9	68	356.1917869820527	1065.553531546358	3	356.1928405761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_VKSC(Carbamidomethyl (C))VFDVL_	REV__ENSG00000119707|ENST00000261973|RBM25	32.81241826257853	0.4965981579233955	6				NaN	NaN	0	NaN	5209	2950	8156
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8162	23.884	NaN	26337	30	0	4227.1	0.036			+	31245	QHGQRSVKGA	10	83	534.2887650811418	1066.5629772290836	2	534.2903442382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QHGQRSVKGA_	REV__ENST00000606723.2_1_6:25998476-25998707:+|nuORF	42.86426827375447	0.522752283233888	6				NaN	NaN	0	NaN	5210	2950	8156
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8163	23.885	NaN	10391	30	0	3179.8	0.145			+	546	ADEPLYLIHI	10	60	395.21607031308145	1182.6263815394443	3	395.2174987792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ADEPLYLIHI_	REV__ENSG00000189056|ENST00000428762|RELN;REV__nc|ENSG00000189056|P78509-2|RELN;REV__nc|ENSG00000189056|P78509-3|RELN;REV__RELN|p.C2194Lfs*11|1|0.06|ENSG00000189056|chr7:103542822-103542823|-/TCGTAATGTATAATAG|frameshift_variant;REV__RELN|p.H3353Tfs*46|1|0.25|ENSG00000189056|chr7:103483777-103483777|G/-|frameshift_variant	24.20275056022122	0.6821818413321409	6				NaN	NaN	0	NaN	5211	2950	8156
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8181	23.925	NaN	69625	30	0	8400.7	0.164	+			33960	RSDAELDPVG	10	82	529.7598126593019	1057.5050723854038	2	529.7615356445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RSDAELDPVG_	EPPK1|p.Y695Ifs*68|1|0.36|ENSG00000261150|chr8:143871171-143871172|-/T|frameshift_variant	87.69643885390035	0.14426223466775756	6				NaN	NaN	0	NaN	5226	2953	8180
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8182	23.927	NaN	35682	30	0	11511	0.106				-1	 	0	78	362.7579277637959	723.5013025943919	2	362.7589416503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5227	2953	8180
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8183	23.929	NaN	73108	30	0	17406	0.106	+			14873	GTLNQPLTK	9	104	486.27830777870014	970.5420626242003	2	486.2794494628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTLNQPLTK_	ENSG00000103671|ENST00000261884|TRIP4	146.78539889680295	0.007618400906539062	6				NaN	NaN	0	NaN	5228	2953	8180
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8184	23.931	NaN	33811	30	0	2720.1	0.106			+	25053	LLKLYISC	8	99	476.78125920296026	951.5479654727205	2	476.7821960449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LLKLYISC_	REV__ENSG00000127946|ENST00000336926|HIP1;REV__nc|ENSG00000127946|O00291-3|HIP1;REV__nc|ENSG00000127946|O00291-4|HIP1	52.29916861842294	0.578018602984656	6				NaN	NaN	0	NaN	5229	2953	8180
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8185	23.933	NaN	15894	30	0	1185.7	0.106	+			13841	GQTGREEKIQ	10	82	573.2997014546066	1144.5848499760132	2	573.3014526367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GQTGREEKIQ_	ENST00000528491.5_1_10:28821838-28824858:+|nuORF;ENST00000532233.5_1_10:28821838-28826589:+|nuORF	101.45984612302182	0.07336148045341315	6				NaN	NaN	0	NaN	5230	2953	8180
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8186	23.935	NaN	20212	30	0	2215	0.106	+			40332	STTAILQQK	9	85	495.28383386149494	988.5531147897899	2	495.2848205566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_STTAILQQK_	ENSG00000196449|ENST00000373044|YRDC	98.62937762414208	0.04060045538121712	6				NaN	NaN	0	NaN	5231	2953	8180
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8187	23.937	NaN	15746	30	0	2005.6	0.034			+	47228	VMITKSNGG	9	88	453.742334560163	NaN	0	453.7423400878906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VMITKSNGG_	REV__ENSG00000159433|ENST00000290607|STARD9;REV__nc|ENSG00000159433|Q9P2P6-3|STARD9	82.24051045832904	0.06370642293906256	6				NaN	NaN	0	NaN	5232	2953	8180
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8205	23.974	NaN	102130	30	0	15953	0.188	+			25731	LRSCPMCQK	9	92	561.7657344815079	1121.5169160298158	2	561.7681884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_LRSC(Carbamidomethyl (C))PMCQK_	ENSG00000162585|ENST00000378546|FAAP20;ENST00000401813.7_1_1:2121150-2129708:-|nuORF;ENST00000476803.1_1_1:2121150-2125598:-|nuORF;ENST00000487186.5_1_1:2121150-2130436:-|nuORF;ENST00000497675.2_1_1:2125076-2125544:-|nuORF;nc|ENSG00000162585|Q6NZ36-2|FAAP20;nc|ENSG00000162585|Q6NZ36-3|FAAP20;nc|ENSG00000162585|Q6NZ36-4|FAAP20;nc|ENSG00000162585|Q6NZ36-5|FAAP20	96.19043198914106	0.047412499214244314	6				NaN	NaN	0	NaN	5247	2956	8204
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8206	23.977	NaN	15880	30	0	2642	0.106			+	50169	WLCLVKTK	8	87	495.7934910752526	989.5724292173052	2	495.79486083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WLCLVKTK_	REV__ENSG00000110514|ENST00000706887|MADD;REV__nc|ENSG00000110514|Q8WXG6-2|MADD;REV__nc|ENSG00000110514|Q8WXG6-3|MADD;REV__nc|ENSG00000110514|Q8WXG6-4|MADD;REV__nc|ENSG00000110514|Q8WXG6-5|MADD;REV__nc|ENSG00000110514|Q8WXG6-6|MADD;REV__nc|ENSG00000110514|Q8WXG6-7|MADD;REV__nc|ENSG00000110514|Q8WXG6-8|MADD;REV__nc|ENSG00000110514|Q8WXG6|MADD	82.30502934623384	0.30436709589983096	6				NaN	NaN	0	NaN	5248	2956	8204
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8207	23.98	NaN	33486	30	0	5629.6	0.106			+	-1	MYLKRFSFG	9	95	582.7969947830002	1163.5794366328003	2	582.7989501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))YLKRFSFG_	REV__ENSG00000164117|ENST00000393674|FBXO8;REV__FBXO8|p.K172Vfs*18|1|0.18|ENSG00000164117|chr4:174241160-174241161|TT/-|frameshift_variant;REV__FBXO8|p.N298Kfs*3|1|0.26|ENSG00000164117|chr4:174237478-174237479|-/T|frameshift_variant;REV__FBXO8|p.R286Gfs*19|1|0.21|ENSG00000164117|chr4:174237516-174237516|T/-|frameshift_variant;REV__nc|ENSG00000164117|Q9NRD0-2|FBXO8	58.78195531508484	0.22376836668196862	6				NaN	NaN	0	NaN	5249	2956	8204
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8208	23.981	NaN	16533	30	0	1541.3	0.106	+			29022	NSRTGKPMP	9	80	502.25425004355975	1002.4939471539195	2	502.75579833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_NSRTGKPM(Oxidation (M))P_	ENSG00000124772|ENST00000244751|CPNE5	45.9519527083369	0.35044536499095585	6				NaN	NaN	0	NaN	5250	2956	8204
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8209	23.983	NaN	11290	30	0	1381.8	0.106	+			20058	KEKEFEETM	9	79	585.769735163063	1169.524917392926	2	585.7713012695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEKEFEETM_	ENSG00000204843|ENST00000628224|DCTN1;nc|ENSG00000204843|Q14203-2|DCTN1;nc|ENSG00000204843|Q14203-3|DCTN1;nc|ENSG00000204843|Q14203-4|DCTN1;nc|ENSG00000204843|Q14203-5|DCTN1;nc|ENSG00000204843|Q14203-6|DCTN1	120.30596017624542	0.02101454110788768	6				NaN	NaN	0	NaN	5251	2956	8204
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8210	23.985	NaN	16794	30	0	3379.8	0.106				-1	 	0	88	488.76751754278274	975.5204821523655	2	488.7689514160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5252	2956	8204
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8211	23.987	NaN	7383.6	30	0	1154.1	0.036	+			4632	ATLPNQPVEK	10	73	548.8039050302674	NaN	0	548.8040771484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATLPNQPVEK_	ENSG00000140525|ENST00000310775|FANCI;nc|ENSG00000140525|Q9NVI1-1|FANCI;nc|ENSG00000140525|Q9NVI1-2|FANCI	60.1669710687717	0.23291468416755162	6				NaN	NaN	0	NaN	5253	2956	8204
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8229	24.021	NaN	22660	30	0	2920.1	0.214				-1	 	0	84	433.2651007965688	864.5156486599376	2	433.2662353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5268	2959	8228
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8230	24.025	NaN	16734	30	0	2333.7	0.106	+			34800	RYLEKNVKL	9	96	388.23522880998667	1161.68385703016	3	388.236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RYLEKNVKL_	ENSG00000137574|ENST00000260129|TGS1;ENST00000523948.5_1_8:56686169-56737149:+|nuORF;TGS1|p.G559Rfs*2|1|0.17|ENSG00000137574|chr8:55799039-55799040|-/A|frameshift_variant	104.01359247289065	0.03510646158778409	6				NaN	NaN	0	NaN	5269	2959	8228
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8231	24.027	NaN	8610.7	30	0	1834.2	0.106			+	5870	AVIRRHRSK	9	58	374.9033022050372	1121.6880772153118	3	374.90460205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVIRRHRSK_	REV__ENST00000581655.1_1_17:80231026-80231098:-|nuORF	24.519189625965996	0.574102787014149	6				NaN	NaN	0	NaN	5270	2959	8228
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8232	24.029	NaN	7058.8	30	0	1089.8	0.106			+	12883	GERMSCLK	8	70	462.2257745154526	922.4369960977052	2	462.2271423339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GERMSCLK_	REV__NTNG2|p.N294K|1|0.26|ENSG00000196358|chr9:132226873-132226873|C/A|missense_variant	34.172542307311794	0.6954784234644539	6				NaN	NaN	0	NaN	5271	2959	8228
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8233	24.031	NaN	5967.7	30	0	670.65	0.106	+			31643	QMSLSLLPPD	10	69	558.7841608180308	1115.5537687028616	2	558.7862548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_QM(Oxidation (M))SLSLLPPD_	ENSG00000101310|ENST00000650089|SEC23B	72.87924865735499	0.25379688738724415	6				NaN	NaN	0	NaN	5272	2959	8228
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8234	24.033	NaN	10013	30	0	872.47	0.034				-1	 	0	71	458.7571315267989	915.4997101203978	2	458.75830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5273	2959	8228
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8235	24.033	NaN	5318.2	30	0	1920	0.138			+	-1	VFMFICLVRLT	11	67	453.2523064536769	NaN	0	453.2503356933594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_VFM(Oxidation (M))FICLVRLT_	REV__ENSG00000112394|ENST00000368851|SLC16A10;REV__ENST00000368850.4_3_6:111498427-111514516:+|nuORF;REV__SLC16A10|p.A384Pfs*23|1|0.04|ENSG00000112394|chr6:111218874-111218874|G/-|frameshift_variant;REV__SLC16A10|p.F367Sfs*5|1|0.32|ENSG00000112394|chr6:111218823-111218823|T/-|frameshift_variant;REV__SLC16A10|p.I282Ffs*9|2|0.22|ENSG00000112394|chr6:111177560-111177560|A/-|frameshift_variant;REV__SLC16A10|p.N327Ifs*30|1|0.39|ENSG00000112394|chr6:111206623-111206623|A/-|frameshift_variant	37.50817390946774	0.39825797133360086	6				NaN	NaN	0	NaN	5274	2959	8228
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8253	24.072	NaN	14168	30	0	2758.8	0.214	+			615	ADTKHGAL	8	71	406.7165648491499	NaN	0	406.7166442871094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ADTKHGAL_	ENSG00000164574|ENST00000297107|GALNT10;ENST00000517958.1_1_5:153783698-153796529:+|nuORF;ENST00000520647.5_1_5:153789305-153796529:+|nuORF;nc|ENSG00000164574|Q86SR1-2|GALNT10;nc|ENSG00000164574|Q86SR1-4|GALNT10	79.9392285194092	1.7418937515398478	6				NaN	NaN	0	NaN	5289	2962	8252
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8254	24.076	NaN	31424	30	0	4235.4	0.106	+			35098	SAGCWPLKK	9	89	495.265144359899	988.515735786598	2	495.2665710449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAGCWPLKK_	ENST00000422843.7_1_5:156638304-156665140:+|nuORF	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	5290	2962	8252
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8255	24.078	NaN	19904	30	0	1764.4	0.106	+			3903	ATAQNIMNPK	10	82	544.2794687561836	1086.5443845791672	2	544.2828979492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATAQNIMNPK_	ENSG00000175311|ENST00000311620|ANKS4B	123.20810148215591	0.02279876478776198	6				NaN	NaN	0	NaN	5291	2962	8252
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8256	24.08	NaN	10840	30	0	1649	0.106			+	15837	GWGWVGTDM	9	84	504.7154445525554	1007.4163361719109	2	504.7169494628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GWGWVGTDM_	REV__nc|ENSG00000172478|Q08AI8-2|MAB21L4	52.29916861842294	0.2778091507991977	6				NaN	NaN	0	NaN	5292	2962	8252
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8257	24.082	NaN	22621	30	0	8360	0.106	+			48286	VTDRNITLSL	10	81	377.88407132677054	1130.6303845805116	3	377.88555908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTDRNITLSL_	ENSG00000105953|ENST00000222673|OGDH;nc|ENSG00000105953|Q02218-2|OGDH;nc|ENSG00000105953|Q02218-3|OGDH;OGDH|p.N950Qfs*3|2|0.28|ENSG00000105953|chr7:44707628-44707629|-/C|frameshift_variant	21.9598887501803	0.7004979571547932	6				NaN	NaN	0	NaN	5293	2962	8252
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8258	24.084	NaN	14490	30	0	7335.8	0.035	+			26423	LTGDGLAHLQ	10	72	512.7735200305293	1023.5324871278586	2	512.7749633789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LTGDGLAHLQ_	ENSG00000105726|ENST00000357324|ATP13A1;ENST00000469641.5_1_19:19756247-19760762:-|nuORF;ENST00000473243.5_1_19:19758362-19760762:-|nuORF;nc|ENSG00000105726|Q9HD20-2|ATP13A1	72.2432373244024	0.2589930451692646	6				NaN	NaN	0	NaN	5294	2962	8252
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8259	24.084	NaN	33392	30	0	7403.9	0.141				-1	 	0	91	537.3122358909013	1072.6099188486025	2	537.3143920898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5295	2962	8252
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8277	24.124	NaN	46839	30	0	28867	0.214				-1	 	0	82	465.25459474990464	928.4946365666093	2	465.2558898925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5310	2965	8276
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8278	24.127	NaN	38449	30	0	9242.3	0.106	+			13188	GIAGSLTNK	9	73	430.74433893830985	859.4741249434197	2	430.7452697753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GIAGSLTNK_	ENSG00000175445|ENST00000650287|LPL	162.25246889848123	0.0040893836092247005	6				NaN	NaN	0	NaN	5311	2965	8276
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8279	24.129	NaN	22767	30	0	7911.3	0.106				-1	 	0	92	358.5438759746702	1072.6097985242106	3	358.544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5312	2965	8276
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8280	24.131	NaN	35507	30	0	5986.9	0.106	+			33008	REFVIMFTL	9	111	385.879205137371	1154.615786012313	3	385.8804931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_REFVIMFTL_	ENSG00000181333|ENST00000315765|HEPHL1;HEPHL1|p.I389Nfs*11|1|0.12|ENSG00000181333|chr11:94070469-94070470|-/A|frameshift_variant	42.396135135203025	0.392153681582562	6				NaN	NaN	0	NaN	5313	2965	8276
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8281	24.133	NaN	22208	30	0	1839.2	0.106	+			14711	GTIIVSGSTEK	11	83	546.2985431544768	1090.5825333757534	2	546.3009643554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTIIVSGSTEK_	ENSG00000114742|ENST00000302313|WDR48;nc|ENSG00000114742|Q8TAF3-3|WDR48;nc|ENSG00000114742|Q8TAF3-4|WDR48	99.78786539795823	0.061125669442822994	6				NaN	NaN	0	NaN	5314	2965	8276
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8282	24.135	NaN	28091	30	0	4463.4	0.034				-1	 	0	90	471.764823301324	941.515093669448	2	471.76605224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5315	2965	8276
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8283	24.135	NaN	13731	30	0	7762.9	0.143	+			5759	AVGKTSFLR	9	68	326.8624762276664	NaN	0	326.86248779296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AVGKTSFLR_	ENSG00000130038|ENST00000440314|CRACR2A	47.95952297671804	0.22075498469600283	6				NaN	NaN	0	NaN	5316	2965	8276
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8301	24.173	NaN	10192	30	0	587.91	0.214				-1	 	0	85	451.74930840533517	901.4840638774704	2	451.7505798339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5331	2968	8300
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8302	24.176	NaN	20911	30	0	3779.4	0.106			+	34885	RYYQNRALL	9	86	598.8301878829371	1195.6458228326742	2	598.8323364257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RYYQNRALL_	REV__ENSG00000168333|ENST00000522267|PPDPFL;REV__nc|ENSG00000168333|Q8WWR9-2|PPDPFL;REV__nc|ENSG00000168333|Q8WWR9|PPDPFL	76.7741389293348	0.11149722112137898	6				NaN	NaN	0	NaN	5332	2968	8300
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8303	24.178	NaN	39232	30	0	9931.8	0.106			+	31572	QLQLEVEAGPL	11	80	399.5556643243979	1195.6451635733938	3	399.55706787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QLQLEVEAGPL_	REV__ENSG00000166535|ENST00000299698|A2ML1;REV__nc|ENSG00000166535|A8K2U0-2|A2ML1	30.568863376406313	0.6691487505135859	6				NaN	NaN	0	NaN	5333	2968	8300
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8304	24.18	NaN	13511	30	0	2568.4	0.106	+			33871	RRLLYALC	8	72	336.5344378546052	NaN	0	336.53424072265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RRLLYALC_	ENSG00000185504|ENST00000327787|FAAP100	37.028477286268924	1.7418937515398478	6				NaN	NaN	0	NaN	5334	2968	8300
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8305	24.182	NaN	15801	30	0	3110.9	0.106			+	34249	RTGPSMRER	9	93	553.2804732135565	1104.546393493913	2	553.2827758789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_RTGPSM(Oxidation (M))RER_	REV__ENST00000440884.7_1_14:103852062-103852221:+|nuORF	60.11826168202944	0.21262886028301267	6				NaN	NaN	0	NaN	5335	2968	8300
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8306	24.184	NaN	10880	30	0	2035.2	0.106				-1	 	0	71	478.7728487963003	955.5311446594006	2	478.7740173339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5336	2968	8300
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8307	24.185	NaN	27249	30	0	5852.3	0.037	+			42425	TAKTNLLDEL	10	94	373.2084535887469	1116.6035313664408	3	373.20965576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TAKTNLLDEL_	ENSG00000028116|ENST00000340157|VRK2;nc|ENSG00000028116|Q86Y07-2|VRK2;nc|ENSG00000028116|Q86Y07-3|VRK2;nc|ENSG00000028116|Q86Y07-4|VRK2;nc|ENSG00000028116|Q86Y07-5|VRK2;VRK2|p.I420Sfs*45|1|0.11|ENSG00000028116|chr2:58159419-58159419|A/-|frameshift_variant	51.33545320467046	0.4446945571623749	6				NaN	NaN	0	NaN	5337	2968	8300
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8325	24.223	NaN	78622	30	0	29902	0.214				-1	 	0	78	406.2176252200257	810.4206975068514	2	406.2189025878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5352	2971	8324
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8326	24.226	NaN	92091	30	0	35012	0.106			+	-1	ATMKPKLVP	9	64	334.2003777449195	999.5793038349584	3	334.2013854980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_ATM(Oxidation (M))KPKLVP_	REV__ENSG00000069020|ENST00000403625|MAST4;REV__MAST4|p.G1923Qfs*4|1|0.33|ENSG00000069020|chr5:67164945-67164946|GG/-|frameshift_variant;REV__MAST4|p.K1789Sfs*10|1|0.22|ENSG00000069020|chr5:67164544-67164544|A/-|frameshift_variant;REV__MAST4|p.S1880Afs*59|1|0.41|ENSG00000069020|chr5:67164811-67164811|C/-|frameshift_variant;REV__nc|ENSG00000069020|O15021-2|MAST4;REV__nc|ENSG00000069020|O15021-3|MAST4;REV__nc|ENSG00000069020|O15021-6|MAST4	26.69291269510374	0.5537881896960711	6				NaN	NaN	0	NaN	5353	2971	8324
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8327	24.228	NaN	40265	30	0	5443.2	0.106	+			41391	SVMLGGRNIK	10	101	537.8064074659287	1073.5982619986573	2	537.808349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVMLGGRNIK_	ENSG00000179950|ENST00000526683|PUF60;nc|ENSG00000179950|Q9UHX1-2|PUF60;nc|ENSG00000179950|Q9UHX1-3|PUF60;nc|ENSG00000179950|Q9UHX1-4|PUF60;nc|ENSG00000179950|Q9UHX1-5|PUF60;nc|ENSG00000179950|Q9UHX1-6|PUF60	139.38205640894643	0.010918844784185366	6				NaN	NaN	0	NaN	5354	2971	8324
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8328	24.23	NaN	57786	30	0	5847.6	0.106	+			36276	SEPCWLRL	8	105	502.25425004355975	1002.4939471539195	2	502.2561340332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SEPCWLRL_	ENST00000469449.1_1_2:219252516-219252801:+|nuORF;ENST00000475225.5_1_2:219251916-219252801:+|nuORF	90.77665401227738	0.27511901818546464	6				NaN	NaN	0	NaN	5355	2971	8324
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8329	24.232	NaN	22332	30	0	3272.1	0.106				-1	 	0	76	461.73923545435457	921.4639179755092	2	461.74041748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5356	2971	8324
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8330	24.234	NaN	33392	30	0	5371.6	0.106			+	8694	EEAKRGRGR	9	89	529.7940207182427	1057.5734885032853	2	529.7958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EEAKRGRGR_	REV__ENSG00000126464|ENST00000418929|PRR12;REV__nc|ENSG00000126464|Q9ULL5-2|PRR12;REV__PRR12|p.P506Lfs*44|1|0.33|ENSG00000126464|chr19:49599569-49599569|C/-|frameshift_variant	54.776311868738084	0.25715957988447635	6				NaN	NaN	0	NaN	5357	2971	8324
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8331	24.236	NaN	186360	30	0	89574	0.038	+			10678	EYSKYARNW	9	107	608.7906554228787	1215.5667579125573	2	608.7926025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EYSKYARNW_	ENST00000578272.1_1_18:51686220-51690905:-|nuORF	99.37495909608758	0.03983967222258828	6				NaN	NaN	0	NaN	5358	2971	8324
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8349	24.271	NaN	591090	30	0	103770	0.115	+			5458	ATYSVGMQK	9	77	492.74318478598	983.4718166387601	2	492.7452697753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATYSVGMQK_	ENSG00000131941|ENST00000254260|RHPN2;ENST00000592247.1_1_19:33470904-33481620:-|nuORF;nc|ENSG00000131941|Q8IUC4-2|RHPN2;nc|ENSG00000258628|A8MT19|RHPN2P1	215.3904343047913	3.137872006661207E-08	6				NaN	NaN	0	NaN	5373	2974	8348
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8350	24.273	NaN	66558	30	0	29855	0.103				-1	 	0	89	430.264739310638	858.514925688076	2	430.26580810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5374	2974	8348
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8351	24.275	NaN	52906	30	0	5168.9	0.106			+	20345	KERSREVK	8	93	516.301854652925	1030.58915637265	2	516.3035278320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KERSREVK_	REV__ENSG00000017260|ENST00000510168|ATP2C1;REV__nc|ENSG00000017260|P98194-3|ATP2C1;REV__nc|ENSG00000017260|P98194-4|ATP2C1;REV__nc|ENSG00000017260|P98194-5|ATP2C1;REV__nc|ENSG00000017260|P98194-6|ATP2C1;REV__nc|ENSG00000017260|P98194-7|ATP2C1;REV__nc|ENSG00000017260|P98194-8|ATP2C1;REV__nc|ENSG00000017260|P98194-9|ATP2C1	98.62937762414208	0.25143494708580966	6				NaN	NaN	0	NaN	5375	2974	8348
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8352	24.277	NaN	68075	30	0	14191	0.106	+			39863	STLNVGVNK	9	100	466.2621263620261	930.5096997908522	2	466.2637023925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STLNVGVNK_	AGBL5|p.R813Gfs*68|1|0.4|ENSG00000084693|chr2:27069649-27069649|C/-|frameshift_variant;ENSG00000084693|ENST00000360131|AGBL5;nc|ENSG00000084693|Q8NDL9-2|AGBL5;nc|ENSG00000084693|Q8NDL9-3|AGBL5	199.70438780651162	3.456851077920069E-05	6				NaN	NaN	0	NaN	5376	2974	8348
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8353	24.279	NaN	46730	30	0	15521	0.106				-1	 	0	99	344.5370470632216	1030.589311789865	3	344.5380554199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5377	2974	8348
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8354	24.281	NaN	15073	30	0	1314.2	0.106				-1	 	0	99	396.24205317638746	1185.7043301293625	3	396.2433166503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5378	2974	8348
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8355	24.283	NaN	34194	30	0	4889.8	0.036	+			39355	STCIYGGAPK	10	86	527.2539644402418	1052.4933759472835	2	527.2554931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_STC(Carbamidomethyl (C))IYGGAPK_	DDX5|p.D424Ifs*31|1|0.03|ENSG00000108654|chr17:64500720-64500721|-/AAGCAATTAAT|frameshift_variant;DDX5|p.D572Nfs*6|1|0.04|ENSG00000108654|chr17:64500054-64500055|-/TGACAAGATAGTT|frameshift_variant;DDX5|p.R502Gfs*87|1|0.21|ENSG00000108654|chr17:64500264-64500264|T/-|frameshift_variant;ENSG00000100201|ENST00000403230|DDX17;ENSG00000108654|ENST00000225792|DDX5;ENST00000216019.11_1_22:38888049-38902242:-|nuORF;ENST00000432525.5_1_22:38886367-38903636:-|nuORF;ENST00000581230.5_1_17:62498125-62502378:-|nuORF;ENST00000583894.1_1_17:62499542-62500133:-|nuORF;nc|ENSG00000100201|Q92841-1|DDX17;nc|ENSG00000100201|Q92841-2|DDX17;nc|ENSG00000100201|Q92841-3|DDX17;nc|ENSG00000108654|P17844-2|DDX5	148.98678547993487	0.008675439182537012	6				NaN	NaN	0	NaN	5379	2974	8348
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8356	24.283	NaN	18706	30	0	6109.1	0.145				-1	 	0	103	376.89099920011114	1127.6511682005334	3	376.8922424316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5380	2974	8348
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8374	24.323	NaN	319120	30	0	67928	0.117				-1	 	0	79	439.25175415990424	876.4889553866085	2	439.2529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5395	2977	8373
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8375	24.325	NaN	133790	30	0	18405	0.104			+	21306	KLSRDSLSVS	10	91	546.3066243874376	1090.5986958416752	2	546.3086547851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KLSRDSLSVS_	REV__ENST00000473529.5_1_9:34647835-34648133:+|nuORF	136.26810882979174	0.01174908900087339	6				NaN	NaN	0	NaN	5396	2977	8373
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8376	24.327	NaN	108130	30	0	14984	0.106				-1	 	0	113	585.8074127047287	1169.6002724762573	2	585.8094482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5397	2977	8373
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8377	24.329	NaN	14677	30	0	4720.5	0.106			+	29125	NTVRQHLRA	9	90	365.54394594247435	1093.6100084276231	3	365.54498291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NTVRQHLRA_	REV__ENSG00000159433|ENST00000290607|STARD9	35.61828744233558	0.47037581924408073	6				NaN	NaN	0	NaN	5398	2977	8373
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8378	24.331	NaN	9207.1	30	0	1584.8	0.106			+	10117	ESMGLKWV	8	73	475.2441457768203	948.4737386204406	2	475.2452392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ESMGLKWV_	REV__ENSG00000149639|ENST00000237536|SOGA1;REV__nc|ENSG00000149639|O94964-1|MTCL2;REV__nc|ENSG00000149639|O94964-3|MTCL2	51.33545320467046	0.5859736979383976	6				NaN	NaN	0	NaN	5399	2977	8373
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8379	24.332	NaN	26916	30	0	16183	0.106	+			25094	LLNNTWLS	8	64	480.75951366521724	959.5044743972345	2	480.76104736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LLNNTWLS_	ENSG00000078269|ENST00000355585|SYNJ2;ENST00000367112.1_2_6:158500311-158517393:+|nuORF;nc|ENSG00000078269|O15056-2|SYNJ2	60.97194046774394	0.49215940876911696	6				NaN	NaN	0	NaN	5400	2977	8373
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8380	24.334	NaN	15119	30	0	6107.3	0.037	+			22807	KVFIDRAKK	9	89	368.9011779480347	NaN	0	368.9011535644531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KVFIDRAKK_	ENSG00000145451|ENST00000274093|GLRA3;nc|ENSG00000145451|O75311-2|GLRA3	52.936696900407355	0.1864545979552969	6				NaN	NaN	0	NaN	5401	2977	8373
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8381	24.335	NaN	18353	30	0	2586.3	0.139	+			48043	VSSARRRL	8	87	472.79109292427216	943.5676329153443	2	472.7922668457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_VSSARRRL_	ENSG00000166484|ENST00000395604|MAPK7;ENST00000486905.1_1_17:19281885-19283261:+|nuORF;ENST00000490660.2_1_17:19282213-19285121:+|nuORF;ENST00000570306.5_1_17:19282213-19282612:+|nuORF;ENST00000572968.5_1_17:19282213-19283750:+|nuORF;nc|ENSG00000166484|Q13164-3|MAPK7	40.5726180659479	0.6527593143185008	6				NaN	NaN	0	NaN	5402	2977	8373
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8399	24.374	NaN	129310	30	0	24774	0.214			+	50065	WFMLGQTK	8	87	513.7571573214439	1025.4997617096876	2	513.7589111328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_WFM(Oxidation (M))LGQTK_	REV__ENST00000428729.1_1_6:3045620-3046031:+|nuORF	99.37495909608758	0.2510236104623939	6				NaN	NaN	0	NaN	5417	2980	8398
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8400	24.378	NaN	44236	30	0	23073	0.083			+	-1	GTQALPNCGK	10	77	349.17488142848777	1044.5028148856634	3	349.176025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GTQALPNC(Carbamidomethyl (C))GK_	REV__ENSG00000131941|ENST00000254260|RHPN2;REV__RHPN2|p.L194Pfs*53|1|0.13|ENSG00000131941|chr19:33011691-33011691|A/-|frameshift_variant	33.921630207806714	0.6028135429846169	6				NaN	NaN	0	NaN	5418	2980	8398
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8401	24.38	NaN	59354	30	0	13165	0.106	+			14469	GTCFGKFTK	9	97	523.259866227497	1044.505179521794	2	523.2615356445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_GTC(Carbamidomethyl (C))FGKFTK_	ENSG00000132603|ENST00000254940|NIP7;ENST00000565034.1_1_16:69373956-69375289:+|nuORF;nc|ENSG00000132603|Q9Y221-2|NIP7	88.17693792209575	0.07000514020414955	6				NaN	NaN	0	NaN	5419	2980	8398
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8402	24.381	NaN	40611	30	0	3098.2	0.106	+			25726	LRRGSSQLSLQ	11	106	415.5739906188355	1243.7001424567065	3	415.5751647949219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LRRGSSQLSLQ_	ENST00000397128.6_1_5:40765139-40765226:-|nuORF	88.1336951990783	0.1064147647397003	6				NaN	NaN	0	NaN	5420	2980	8398
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8403	24.383	NaN	28377	30	0	1613	0.106			+	23793	LCLVLIRW	8	94	508.3092888674758	1014.6040248017516	2	508.3108825683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LCLVLIRW_	REV__ENST00000303531.11_2_16:24231131-24231431:+|nuORF	79.9392285194092	0.32408006123154964	6				NaN	NaN	0	NaN	5421	2980	8398
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8404	24.385	NaN	22377	30	0	3777.1	0.106			+	36230	SELVRLTVV	9	105	339.20826785822067	1014.6029741748621	3	339.2096862792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SELVRLTVV_	REV__ENSG00000160323|ENST00000355699|ADAMTS13;REV__ENST00000485925.5_1_9:136305545-136324175:+|nuORF;REV__nc|ENSG00000160323|Q76LX8-3|ADAMTS13;REV__nc|ENSG00000160323|Q76LX8|ADAMTS13	41.42661286455405	0.403525789677298	6				NaN	NaN	0	NaN	5422	2980	8398
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8405	24.387	NaN	13882	30	0	1877.3	0.035	+			31135	QGDRCIMGQ	9	88	504.2236140906804	1006.4326752481609	2	504.2249450683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QGDRCIMGQ_	ENSG00000184985|ENST00000507866|SORCS2	51.19269402634007	0.2889735674168909	6				NaN	NaN	0	NaN	5423	2980	8398
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8423	24.424	NaN	658010	30	0	172810	0.076	+			28206	NASRDQVVY	9	79	526.2606041143138	1050.5066552954274	2	526.2630615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NASRDQVVY_	ENSG00000167608|ENST00000619895|TMC4;nc|ENSG00000167608|Q7Z404-1|TMC4;nc|ENSG00000167608|Q7Z404|TMC4;TMC4|p.F240Lfs*221|1|0.42|ENSG00000167608|chr19:54168267-54168268|AA/-|frameshift_variant;TMC4|p.Q383Rfs*6|1|0.37|ENSG00000167608|chr19:54163872-54163872|G/-|frameshift_variant	88.17693792209575	0.07000514020414955	6				NaN	NaN	0	NaN	5438	2983	8422
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8424	24.425	NaN	107480	30	0	28252	0.106			+	24531	LGLFYSSNR	9	88	528.7770119178655	1055.5394709025309	2	528.77880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LGLFYSSNR_	REV__ENSG00000198178|ENST00000360345|CLEC4C;REV__nc|ENSG00000198178|Q8WTT0-2|CLEC4C	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	5439	2983	8422
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8425	24.427	NaN	64651	30	0	11966	0.106				-1	 	0	95	547.7709176019187	1093.5272822706372	2	547.7730102539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5440	2983	8422
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8426	24.429	NaN	59647	30	0	7241.1	0.106				-1	 	0	108	465.7887699312479	929.5629869292958	2	465.79010009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5441	2983	8422
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8427	24.431	NaN	37268	30	0	5142.4	0.106			+	-1	KNMMKMLII	9	100	569.3146270112986	1136.6147010893972	2	569.316650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_KNMM(Oxidation (M))KMLII_	REV__ENST00000374466.3_1_10:43651147-43651228:+|nuORF	63.30626980617807	0.18605348971131092	6				NaN	NaN	0	NaN	5442	2983	8422
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8428	24.433	NaN	31841	30	0	5174.7	0.106	+			42235	TAALAHTSY	9	92	467.73409891577234	933.4536448983447	2	467.7348937988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TAALAHTSY_	ENSG00000205277|ENST00000536621|MUC12;nc|ENSG00000205277|Q9UKN1|MUC12	98.62937762414208	0.04060045538121712	6				NaN	NaN	0	NaN	5443	2983	8422
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8429	24.435	NaN	8474.7	30	0	850.7	0.106			+	27156	MCKRPNSA	8	62	453.71810819006043	905.4216634469209	2	453.71923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MCKRPNSA_	REV__ENSG00000147206|ENST00000395065|NXF3;REV__ENST00000460791.1_1_X:102337106-102338370:-|nuORF;REV__nc|ENSG00000147206|Q9H4D5-2|NXF3;REV__NXF3|p.S504Rfs*7|1|0.21|ENSG00000147206|chrX:103077686-103077687|-/AT|frameshift_variant	52.29916861842294	0.578018602984656	6				NaN	NaN	0	NaN	5444	2983	8422
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8430	24.437	NaN	28825	30	0	3260.1	0.035			+	33657	RNCQQQAAV	9	106	509.2487248538867	1016.4828967745734	2	509.2505798339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_RNCQQQAAV_	REV__ENSG00000025434|ENST00000441012|NR1H3;REV__ENST00000487913.5_1_11:47282796-47283054:+|nuORF;REV__nc|ENSG00000025434|Q13133-2|NR1H3;REV__nc|ENSG00000025434|Q13133-3|NR1H3	47.91560031466742	0.327412564698279	6				NaN	NaN	0	NaN	5445	2983	8422
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8448	24.473	NaN	46794	30	0	25870	0.214			+	36824	SIEVMLMKS	9	105	351.85027154509817	NaN	0	351.8503112792969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_SIEVMLM(Oxidation (M))KS_	REV__ENST00000340080.8_1_7:7606567-7607293:+|nuORF	56.43379154798735	0.16452882468284893	6				NaN	NaN	0	NaN	5460	2986	8447
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8449	24.477	NaN	31250	30	0	4935.9	0.106				-1	 	0	91	398.7725422695721	795.5305316059442	2	398.7738342285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5461	2986	8447
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8450	24.479	NaN	15640	30	0	2884.7	0.106	+			41969	SVWHGTLSK	9	82	507.77031166037665	1013.5260703875533	2	507.77215576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVWHGTLSK_	ENSG00000136270|ENST00000258770|TBRG4;nc|ENSG00000136270|Q969Z0-2|TBRG4;TBRG4|p.L492Cfs*9|2|0.32|ENSG00000136270|chr7:45101918-45101918|G/-|frameshift_variant	107.00750918261382	0.032051501805654005	6				NaN	NaN	0	NaN	5462	2986	8447
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8451	24.481	NaN	33271	30	0	6802	0.106	+			19444	KAQVYYRA	8	86	499.77453135779086	997.5345097823817	2	499.7762451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KAQVYYRA_	ENSG00000117298|ENST00000374893|ECE1;ENST00000526194.5_1_1:21560049-21616919:-|nuORF;nc|ENSG00000117298|P42892-2|ECE1;nc|ENSG00000117298|P42892-3|ECE1;nc|ENSG00000117298|P42892-4|ECE1	55.50420428727701	0.5462892107279674	6				NaN	NaN	0	NaN	5463	2986	8447
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8452	24.482	NaN	36990	30	0	4307.6	0.106			+	37321	SLDVSSIRQ	9	98	502.7724742123862	1003.5303954915724	2	502.7740783691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SLDVSSIRQ_	REV__ENSG00000081913|ENST00000262719|PHLPP1;REV__nc|ENSG00000081913|O60346-2|PHLPP1;REV__PHLPP1|p.N1186Tfs*10|1|0.14|ENSG00000081913|chr18:62963464-62963464|A/-|frameshift_variant;REV__PHLPP1|p.T1236Nfs*38|2|0.39|ENSG00000081913|chr18:62972653-62972654|-/A|frameshift_variant	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	5464	2986	8447
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8453	24.484	NaN	20439	30	0	1800.1	0.035			+	50606	YDQRYSPG	8	82	493.2224287482194	984.4303045632388	2	493.22393798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YDQRYSPG_	REV__CFAP47|p.F1567Vfs*4|1|0.31|ENSG00000165164|chrX:36098829-36098830|-/G|frameshift_variant;REV__CFAP47|p.G416Efs*26|1|0.04|ENSG00000165164|chrX:35956032-35956033|-/AATATATTTGCTTA|frameshift_variant;REV__CFAP47|p.H2345Afs*15|1|0.09|ENSG00000165164|chrX:36236809-36236810|-/A|frameshift_variant;REV__CFAP47|p.K734Nfs*6|1|0.13|ENSG00000165164|chrX:35971909-35971909|A/-|frameshift_variant;REV__CFAP47|p.P2326Tfs*34|1|0.26|ENSG00000165164|chrX:36236751-36236752|-/A|frameshift_variant;REV__ENSG00000165164|ENST00000378653|CFAP47;REV__nc|ENSG00000165164|Q6ZTR5-1|CFAP47;REV__nc|ENSG00000165164|Q6ZTR5-2|CFAP47;REV__nc|ENSG00000165164|Q6ZTR5-6|CFAP47	71.87747018426188	0.391254423828572	6				NaN	NaN	0	NaN	5465	2986	8447
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8454	24.485	NaN	11782	30	0	4889.7	0.143			+	-1	SVFCLLYI	8	63	338.8493249714528	1013.5261455145585	3	338.850341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_SVFC(Carbamidomethyl (C))LLYI_	REV__ENSG00000111817|ENST00000644252|DSE;REV__ENST00000607094.1_1_6:116600797-116720830:+|nuORF	24.20275056022122	0.7724576178584145	6				NaN	NaN	0	NaN	5466	2986	8447
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8472	24.523	NaN	425570	30	0	91251	0.06	+			681	AEAKFREIA	9	87	517.7849644559424	1033.5553759786847	2	517.7869262695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEAKFREIA_	ENSG00000128590|ENST00000249356|DNAJB9;ENST00000465725.1_1_7:108212170-108215134:+|nuORF;ENST00000491582.1_1_7:108210452-108212392:+|nuORF	77.31757898189308	0.1091473830098891	6				NaN	NaN	0	NaN	5481	2989	8471
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8473	24.524	NaN	375630	30	0	208200	0.08			+	-1	ISCTLKNKA	9	79	345.525651207775	1033.5551242235251	3	345.5270080566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_ISC(Carbamidomethyl (C))TLKNKA_	REV__ENSG00000124496|ENST00000695948|TRERF1;REV__nc|ENSG00000124496|Q96PN7-2|TRERF1;REV__nc|ENSG00000124496|Q96PN7-3|TRERF1;REV__nc|ENSG00000124496|Q96PN7-4|TRERF1;REV__nc|ENSG00000124496|Q96PN7-5|TRERF1;REV__nc|ENSG00000124496|Q96PN7|TRERF1;REV__TRERF1|p.F853Rfs*6|2|0.34|ENSG00000124496|chr6:42256748-42256751|CAAA/-|frameshift_variant	51.19269402634007	0.2889735674168909	6				NaN	NaN	0	NaN	5482	2989	8471
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8474	24.525	NaN	60418	30	0	6224.2	0.106				-1	 	0	95	473.270518154022	944.526483374844	2	473.27154541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5483	2989	8471
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8475	24.527	NaN	34153	30	0	6632.8	0.106			+	15678	GVMTLTYVL	9	94	352.1877621582123	1053.541457074837	3	352.1887512207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))GVM(Oxidation (M))TLTYVL_	REV__ENSG00000181785|ENST00000641320|OR5AS1;REV__OR5AS1|p.F31S|1|0.32|ENSG00000181785|chr11:56030510-56030510|T/C|missense_variant;REV__OR5AS1|p.L268*|1|0.27|ENSG00000181785|chr11:56031218-56031218|C/-|frameshift_variant;REV__OR5AS1|p.T210Dfs*7|1|0.04|ENSG00000181785|chr11:56031043-56031044|-/GTGATGTT|frameshift_variant	79.45101966838831	0.09992237243120712	6				NaN	NaN	0	NaN	5484	2989	8471
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8476	24.529	NaN	12786	30	0	1609.8	0.106				-1	 	0	74	495.2834090225579	988.5522651119159	2	495.2846984863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5485	2989	8471
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8477	24.531	NaN	27028	30	0	4548.2	0.106				-1	 	0	109	509.7918041395413	1017.5690553458826	2	509.7933044433594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5486	2989	8471
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8478	24.533	NaN	17918	30	0	2573.7	0.106				-1	 	0	68	428.2673947988501	854.5202366645002	2	428.2683410644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5487	2989	8471
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8479	24.534	NaN	18142	30	0	2426	0.033			+	12105	GADRGFVL	8	76	417.72738669011045	833.4402204470209	2	417.7285461425781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_GADRGFVL_	REV__ENSG00000173898|ENST00000533211|SPTBN2;REV__nc|ENSG00000173898|O15020-2|SPTBN2	60.29395666154354	0.49887135096048313	6				NaN	NaN	0	NaN	5488	2989	8471
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8480	24.535	NaN	4439.3	30	0	524.35	0.144			+	18231	INNQYPYIKQ	10	83	640.835033342225	1279.6555137512498	2	640.8370971679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	9	Unmodified	_INNQYPYIKQ_	REV__ENSG00000188738|ENST00000424728|FSIP2;REV__FSIP2|p.D5579Mfs*10|1|0.09|ENSG00000188738|chr2:185806029-185806029|A/-|frameshift_variant;REV__FSIP2|p.K6152Rfs*27|1|0.43|ENSG00000188738|chr2:185807758-185807758|A/-|frameshift_variant;REV__FSIP2|p.K6528Nfs*5|1|0.33|ENSG00000188738|chr2:185808884-185808884|A/-|frameshift_variant;REV__FSIP2|p.V5734Yfs*24|2|0.23|ENSG00000188738|chr2:185806499-185806499|A/-|frameshift_variant;REV__FSIP2|p.V6322*|1|0.42|ENSG00000188738|chr2:185808265-185808265|A/-|frameshift_variant;REV__nc|ENSG00000188738|Q5CZC0-2|FSIP2	66.42927471994793	0.3073667423445326	6				NaN	NaN	0	NaN	5489	2989	8471
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8495	24.575	NaN	56475	30	0	7241.7	0.215	+			36138	SEKRMKLTL	9	114	369.2166219434167	1104.6280364304503	3	369.21807861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEKRMKLTL_	ENSG00000143799|ENST00000366794|PARP1;ENST00000413631.1_1_13:111590511-111591024:+|nuORF;PARP1|p.T799Lfs*41|1|0.39|ENSG00000143799|chr1:226367491-226367491|T/-|frameshift_variant	72.87924865735499	0.12833875048249987	6				NaN	NaN	0	NaN	5501	2992	8494
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8496	24.579	NaN	24076	30	0	3220.3	0.106				-1	 	0	83	642.865327088633	1283.7161012440658	2	642.8671264648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5502	2992	8494
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8497	24.581	NaN	16034	30	0	2220.3	0.106	+			34913	SAAELRHVM	9	87	507.2616674610972	1012.5087819889944	2	507.263427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAAELRHVM_	CALML3|p.E115Rfs*3|1|0.35|ENSG00000178363|chr10:5525424-5525424|G/-|frameshift_variant;ENSG00000143933|ENST00000272298|CALM2;ENSG00000160014|ENST00000291295|CALM3;ENSG00000178363|ENST00000315238|CALML3;ENSG00000198668|ENST00000356978|CALM1;ENST00000482532.5_1_2:47387917-47389823:-|nuORF;ENST00000597868.5_1_19:47111871-47112407:+|nuORF	61.691277971877994	0.19951612995419254	6				NaN	NaN	0	NaN	5503	2992	8494
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8498	24.583	NaN	10621	30	0	1277.9	0.106			+	37755	SLVEFSCGL	9	66	477.7342671123366	953.4539812914733	2	477.7353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLVEFSCGL_	REV__ENSG00000172139|ENST00000305815|SLC9C1;REV__nc|ENSG00000172139|Q4G0N8-2|SLC9C1;REV__SLC9C1|p.F238Lfs*8|1|0.12|ENSG00000172139|chr3:112269977-112269977|A/-|frameshift_variant;REV__SLC9C1|p.F702Lfs*6|1|0.31|ENSG00000172139|chr3:112204284-112204284|A/-|frameshift_variant;REV__SLC9C1|p.R66Kfs*29|1|0.36|ENSG00000172139|chr3:112278850-112278851|-/T|frameshift_variant;REV__SLC9C1|p.S672Hfs*9|3|0.24|ENSG00000172139|chr3:112204376-112204376|A/-|frameshift_variant;REV__SLC9C1|p.T1117Hfs*4|1|0.38|ENSG00000172139|chr3:112167236-112167236|T/-|frameshift_variant	57.81127852772723	0.2318599694398087	6				NaN	NaN	0	NaN	5504	2992	8494
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8499	24.585	NaN	14099	30	0	1086	0.034	+			16873	HPGQISAGY	9	85	465.2299189840221	NaN	0	465.2275695800781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HPGQISAGY_	ENSG00000101210|ENST00000217182|EEF1A2;ENSG00000156508|ENST00000309268|EEF1A1;ENST00000436459.2_1_9:135895553-135896258:+|nuORF;nc|ENSG00000196205|Q5VTE0|EEF1A1P5	84.9155231211612	0.05454024040755679	6				NaN	NaN	0	NaN	5505	2992	8494
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8516	24.621	NaN	29101	30	0	2856.8	0.214	+			37566	SLMPCRQQA	9	92	553.7578081197018	1105.5010633062036	2	553.7598266601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_SLM(Oxidation (M))PC(Carbamidomethyl (C))RQQA_	ENST00000222402.7_1_7:43995369-43995687:+|nuORF	49.44154591367651	0.3095138337212152	6				NaN	NaN	0	NaN	5519	2995	8515
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8517	24.624	NaN	13085	30	0	4011.7	0.106				-1	MEKLRKVC	8	86	532.2907942184378	1062.5670355036755	2	533.7931518554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_MEKLRKVC(Carbamidomethyl (C))_	ENST00000506396.1_1_5:31249548-31249821:+|nuORF	35.61828744233558	0.6843154725607303	6				NaN	NaN	0	NaN	5520	2995	8515
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8518	24.627	NaN	17120	30	0	2226.9	0.106	+			31512	QLFLQDIKL	9	90	559.3345918453067	1116.6546307574133	2	559.3367919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QLFLQDIKL_	ENST00000370801.7_1_1:78107323-78148330:-|nuORF	140.11223852658463	0.010427410095706195	6				NaN	NaN	0	NaN	5521	2995	8515
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8519	24.628	NaN	16201	30	0	6426.5	0.106			+	44018	TPKQKKRPQRR	11	85	474.9632929436605	1421.8680494311816	3	474.9645690917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TPKQKKRPQRR_	REV__nc|ENSG00000048342|Q9P2K1-5|CC2D2A	12.95748067046073	0.8098171233146934	6				NaN	NaN	0	NaN	5522	2995	8515
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8520	24.63	NaN	15904	30	0	2475.4	0.106				-1	 	0	85	497.2705544190776	992.5265559049552	2	497.272216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5523	2995	8515
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8521	24.632	NaN	9329.6	30	0	1577.8	0.037	+			31005	QESEERKLE	9	77	574.2837300886454	1146.5529072440906	2	574.2854614257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QESEERKLE_	ENST00000394629.2_1_7:89843146-89845845:+|nuORF	51.19269402634007	0.2889735674168909	6				NaN	NaN	0	NaN	5524	2995	8515
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8522	24.633	NaN	11420	30	0	1546.2	0.144				-1	VVLLWCCL	8	69	354.8537691064961	1061.5394779196884	3	354.8548278808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C)	_VVLLWC(Carbamidomethyl (C))C(Carbamidomethyl (C))L_	sp|P16832|GL_HCMVAEnvelopeglycoproteinLOS=Humancytomegalovirus(strainAD169)OX=10360GN=gLPE=1SV=2	35.200714571348534	0.6875396545722289	6				NaN	NaN	0	NaN	5525	2995	8515
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8539	24.671	NaN	23638	30	0	4983.6	0.214			+	21395	KMMKRLKE	8	80	532.3094721677261	1062.604391402252	2	532.3111572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KMMKRLKE_	REV__ENSG00000122218|ENST00000241704|COPA;REV__nc|ENSG00000122218|P53621-2|COPA	90.77665401227738	0.27511901818546464	6				NaN	NaN	0	NaN	5539	2998	8538
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8540	24.674	NaN	33078	30	0	4519.5	0.106	+			51435	YVCHLLYL	8	99	540.779343024136	1079.5441331150719	2	540.7816772460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_YVC(Carbamidomethyl (C))HLLYL_	ENSG00000102384|ENST00000682095|CENPI;nc|ENSG00000102384|Q92674-2|CENPI	54.89457262308372	0.5523244765420926	6				NaN	NaN	0	NaN	5540	2998	8538
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8541	24.676	NaN	27676	30	0	3486.5	0.106				-1	 	0	97	528.7338258382895	1055.4530987433789	2	528.7354736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5541	2998	8538
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8542	24.678	NaN	13669	30	0	2544.3	0.106			+	43402	TGIFVNKKT	9	78	336.5344378546052	NaN	0	336.5342712402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TGIFVNKKT_	REV__ENSG00000188906|ENST00000298910|LRRK2;REV__LRRK2|p.I614S|1|0.25|ENSG00000188906|chr12:40274893-40274893|T/G|missense_variant;REV__LRRK2|p.K1328Rfs*8|1|0.21|ENSG00000188906|chr12:40308485-40308485|A/-|frameshift_variant;REV__LRRK2|p.K906Rfs*8|1|0.29|ENSG00000188906|chr12:40293568-40293568|A/-|frameshift_variant;REV__LRRK2|p.L818Dfs*10|1|0.07|ENSG00000188906|chr12:40284084-40284085|-/GACTGCT|frameshift_variant;REV__LRRK2|p.N2261Kfs*9|1|0.28|ENSG00000188906|chr12:40356119-40356120|-/A|frameshift_variant;REV__LRRK2|p.N710Mfs*2|1|0.49|ENSG00000188906|chr12:40278144-40278144|A/-|frameshift_variant;REV__LRRK2|p.R1639Gfs*15|1|0.59|ENSG00000188906|chr12:40320068-40320068|A/-|frameshift_variant;REV__LRRK2|p.R1639Kfs*13|1|0.36|ENSG00000188906|chr12:40320067-40320068|-/A|frameshift_variant	23.04248740728303	0.3589936788096251	6				NaN	NaN	0	NaN	5542	2998	8538
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8543	24.68	NaN	8066.7	30	0	645.35	0.106	+			19591	KDEIRHSR	8	79	520.7835115160158	1039.5524700988315	2	520.7858276367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KDEIRHSR_	ADAMTS20|p.R246I|1|0.24|ENSG00000173157|chr12:43502282-43502282|C/A|missense_variant	74.25504064058377	0.37144338840759816	6				NaN	NaN	0	NaN	5543	2998	8538
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8544	24.682	NaN	13107	30	0	2523.7	0.036			+	8554	EAVMEGKVKT	10	88	554.291449002169	1106.5683450711379	2	554.29296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_EAVM(Oxidation (M))EGKVKT_	REV__ENST00000216629.10_1_14:96722250-96722388:+|nuORF	74.1650062923329	0.2432923583094885	6				NaN	NaN	0	NaN	5544	2998	8538
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8561	24.717	NaN	180780	30	0	16386	0.165	+			27753	MQTTRKILM	9	96	561.3120410275004	1120.6095291218007	2	561.3137817382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MQTTRKILM_	ENSG00000178295|ENST00000381254|GEN1	112.41091882917199	0.026537921851008135	6				NaN	NaN	0	NaN	5558	3001	8560
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8562	24.719	NaN	38070	30	0	5426.3	0.106	+			10738	FAEDGARTV	9	90	483.23704160077546	964.4595302683509	2	483.2378234863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FAEDGARTV_	ENSG00000157240|ENST00000287934|FZD1	101.45984612302182	0.0377122763612125	6				NaN	NaN	0	NaN	5559	3001	8560
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8563	24.722	NaN	34885	30	0	5747.6	0.106	+			25294	LNWTSSSI	8	84	454.22995639870186	906.4453598642037	2	454.2312316894531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LNWTSSSI_	ENSG00000131951|ENST00000570145|LRRC9;nc|ENSG00000131951|Q6ZRR7-2|LRRC9;nc|ENSG00000131951|Q6ZRR7|LRRC9	82.30502934623384	0.30436709589983096	6				NaN	NaN	0	NaN	5560	3001	8560
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8564	24.723	NaN	14949	30	0	3305.2	0.106	+			1379	AEVKERVTL	9	84	348.87312698302054	NaN	0	348.8731384277344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEVKERVTL_	EIF2B5|p.L605Pfs*9|1|0.26|ENSG00000145191|chr3:184143504-184143505|-/C|frameshift_variant;ENSG00000145191|ENST00000648915|EIF2B5;ENST00000491144.5_1_3:183857994-183862728:+|nuORF;ENST00000492773.5_1_3:183859720-183860594:+|nuORF	58.78195531508484	0.1545138866451181	6				NaN	NaN	0	NaN	5561	3001	8560
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8565	24.725	NaN	20518	30	0	4353.3	0.106	+			6055	AVMGNPVTR	9	91	472.7515651614718	943.4885773897436	2	472.7526550292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVMGNPVTR_	ENSG00000136021|ENST00000360820|SCYL2	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	5562	3001	8560
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8566	24.727	NaN	34291	30	0	10030	0.106			+	12347	GDLAQQVRSD	10	88	363.5160177835469	1087.5262239508406	3	363.1833801269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GDLAQQVRSD_	REV__ENSG00000110921|ENST00000228510|MVK	32.81241826257853	0.6118718159329168	6				NaN	NaN	0	NaN	5563	3001	8560
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8567	24.729	NaN	6836.6	30	0	1391.4	0.034				-1	 	0	60	469.25176172925984	936.4889705253197	2	469.2529602050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5564	3001	8560
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8584	24.765	NaN	207820	30	0	34680	0.144	+			47283	VNALNNNTTQ	10	96	544.7703027764809	1087.5260526197617	2	544.7720947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VNALNNNTTQ_	ENSG00000161798|ENST00000293599|AQP5	77.31757898189308	0.2175361111083648	6				NaN	NaN	0	NaN	5578	3004	8583
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8585	24.767	NaN	509200	30	0	210050	0.106			+	33240	RGADGSSTPLQ	11	138	363.5160177835469	1087.5262239508406	3	363.5171813964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RGADGSSTPLQ_	REV__DCUN1D3|p.D149*|1|0.27|ENSG00000188215|chr16:20860356-20860357|-/A|frameshift_variant;REV__ENSG00000188215|ENST00000324344|DCUN1D3	72.2432373244024	0.21703855426835802	6				NaN	NaN	0	NaN	5579	3004	8583
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8586	24.77	NaN	66904	30	0	27899	0.106				-1	 	0	98	527.2806683038573	1052.5467836745145	2	527.2826538085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5580	3004	8583
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8587	24.771	NaN	35612	30	0	7140.7	0.106			+	31662	QNEVNNGATLE	11	75	594.7786271719038	1187.5427014106076	2	594.780517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QNEVNNGATLE_	REV__ENSG00000143079|ENST00000271277|CTTNBP2NL	75.04331003522576	0.19369523587789836	6				NaN	NaN	0	NaN	5581	3004	8583
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8588	24.773	NaN	43580	30	0	10089	0.106			+	2478	APMRAVCQ	8	93	438.21513373330646	874.4157145334129	2	438.21624755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_APMRAVCQ_	REV__BOC|p.Q445Nfs*66|1|0.29|ENSG00000144857|chr3:113274468-113274468|G/-|frameshift_variant;REV__ENSG00000144857|ENST00000682979|BOC;REV__ENST00000471963.6_1_3:112968649-112990141:+|nuORF;REV__nc|ENSG00000144857|Q9BWV1|BOC	44.53106598305862	0.628196326904373	6				NaN	NaN	0	NaN	5582	3004	8583
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8589	24.775	NaN	28584	30	0	17677	0.106				-1	 	0	74	435.2441972881343	868.4738416430686	2	435.2454833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5583	3004	8583
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8590	24.777	NaN	18280	30	0	3200.9	0.032				-1	 	0	79	414.23900052836757	826.4634481235352	2	414.2401428222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5584	3004	8583
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8608	24.815	NaN	119840	30	0	34843	0.147	+			38353	SRMTIGMLIE	10	76	389.53488391336015	1165.5828223402805	3	389.5360412597656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_SRM(Oxidation (M))TIGMLIE_	ENSG00000125630|ENST00000263331|POLR1B;nc|ENSG00000125630|Q9H9Y6-2|POLR1B;nc|ENSG00000125630|Q9H9Y6-3|POLR1B;nc|ENSG00000125630|Q9H9Y6-4|POLR1B;nc|ENSG00000125630|Q9H9Y6-5|POLR1B	63.42647028704847	0.33467688528802414	6				NaN	NaN	0	NaN	5599	3007	8607
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8609	24.818	NaN	85016	30	0	8995.7	0.091	+			24165	LEMACTLRTL	10	95	583.7988711542164	1165.5831893752327	2	583.8005981445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LEM(Oxidation (M))ACTLRTL_	ENST00000375286.7_1_17:73059416-73059569:+|nuORF	101.25262130126117	0.07397688119410509	6				NaN	NaN	0	NaN	5600	3007	8607
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8610	24.82	NaN	91451	30	0	16073	0.106	+			42554	TASAVVQHM	9	99	472.2352494787553	942.4559460243106	2	472.236572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TASAVVQHM_	ENSG00000115524|ENST00000335508|SF3B1	127.46168284122857	0.016682644177004526	6				NaN	NaN	0	NaN	5601	3007	8607
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8611	24.821	NaN	30243	30	0	3917.1	0.106	+			41729	SVSEVVVNR	9	86	494.7741321944655	NaN	0	494.7739562988281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVSEVVVNR_	ENSG00000099821|ENST00000588649|POLRMT;ENST00000578759.1_1_17:60217316-60217976:-|nuORF	124.08010499294276	0.0015010289275841425	6				NaN	NaN	0	NaN	5602	3007	8607
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8612	24.823	NaN	35737	30	0	6906.7	0.106			+	-1	KFPKMRSPG	9	90	532.2907942184378	1062.5670355036755	2	532.7905883789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_KFPKM(Oxidation (M))RSPG_	REV__ENSG00000100296|ENST00000490103|THOC5;REV__ENST00000442555.5_1_22:29904448-29924274:-|nuORF;REV__THOC5|p.Y673S|1|0.21|ENSG00000100296|chr22:29508491-29508491|T/G|missense_variant	63.30626980617807	0.18605348971131092	6				NaN	NaN	0	NaN	5603	3007	8607
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8613	24.825	NaN	26433	30	0	7527.3	0.106	+			23605	LANREFHTK	9	92	372.535485826651	1114.584628080153	3	372.5365905761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LANREFHTK_	ENSG00000133816|ENST00000683283|MICAL2;nc|ENSG00000133816|O94851-3|MICAL2;nc|ENSG00000133816|O94851|MICAL2	37.81151784470057	0.4459294069877048	6				NaN	NaN	0	NaN	5604	3007	8607
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8614	24.827	NaN	20193	30	0	2161.3	0.035	+			12516	GEEVAMRKL	9	92	516.7771122589265	1031.539671584653	2	516.7789306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GEEVAMRKL_	ENSG00000160789|ENST00000368300|LMNA;ENST00000496738.5_1_1:156106882-156107552:+|nuORF;nc|ENSG00000160789|P02545-2|LMNA;nc|ENSG00000160789|P02545-4|LMNA;nc|ENSG00000160789|P02545-5|LMNA;nc|ENSG00000160789|P02545-6|LMNA	75.04331003522576	0.118981335847003	6				NaN	NaN	0	NaN	5605	3007	8607
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8632	24.863	NaN	90768	30	0	9693.7	0.193				-1	 	0	97	472.2806538674807	942.5467548017614	2	472.2819519042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5620	3010	8631
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8633	24.866	NaN	27483	30	0	4768.3	0.106				-1	TITPSSMRKI	10	102	383.8813606461268	1148.6222525385804	3	383.8827209472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_TITPSSM(Oxidation (M))RKI_	ENSG00000143476|ENST00000366991|DTL	31.634271133179894	0.6214930414500597	6				NaN	NaN	0	NaN	5621	3010	8631
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8634	24.869	NaN	45711	30	0	10834	0.106				-1	 	0	101	404.7178786352506	807.4212043373012	2	404.7192077636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5622	3010	8631
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8635	24.871	NaN	12004	30	0	2935.1	0.106			+	46640	VGCQPIAINAL	11	76	549.8026771478862	1097.5908013625724	2	549.8047485351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VGCQPIAINAL_	REV__ENSG00000205832|ENST00000444310|C16orf96	64.20726635412375	0.28589947959657164	6				NaN	NaN	0	NaN	5623	3010	8631
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8636	24.872	NaN	8890.6	30	0	780.66	0.106	+			8551	EAVKQYSSY	9	84	537.7573961929398	1073.5002394526796	2	537.7593383789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EAVKQYSSY_	ENSG00000170525|ENST00000379775|PFKFB3;nc|ENSG00000170525|Q16875-2|PFKFB3;nc|ENSG00000170525|Q16875-3|PFKFB3;nc|ENSG00000170525|Q16875-4|PFKFB3	98.62937762414208	0.04060045538121712	6				NaN	NaN	0	NaN	5624	3010	8631
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8637	24.874	NaN	16961	30	0	4030.1	0.038			+	22483	KTNDKEDQEQ	10	84	617.7815000336394	NaN	0	617.7816162109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KTNDKEDQEQ_	REV__ENSG00000109255|ENST00000264218|NMU;REV__ENST00000515325.5_1_4:56465315-56502750:-|nuORF	120.30596017624542	0.018890087788199523	6				NaN	NaN	0	NaN	5625	3010	8631
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8653	24.908	NaN	43757	30	0	8407.4	0.208	+			29914	PLQREQHR	8	91	532.2907942184378	1062.5670355036755	2	532.29296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PLQREQHR_	GTF3C1|p.P1914Qfs*30|1|0.16|ENSG00000077235|chr16:27464451-27464451|G/-|frameshift_variant	51.33545320467046	0.5859736979383976	6				NaN	NaN	0	NaN	5638	3013	8652
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8654	24.912	NaN	49476	30	0	14526	0.106				-1	CVARMLKS	8	90	482.75712000363274	963.4996870740655	2	482.75830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_C(Carbamidomethyl (C))VARMLKS_	DGKZ|p.K449Qfs*17|1|0.38|ENSG00000149091|chr11:46371724-46371725|-/C|frameshift_variant;ENSG00000149091|ENST00000456247|DGKZ;nc|ENSG00000149091|Q13574-1|DGKZ;nc|ENSG00000149091|Q13574-3|DGKZ	68.484700416344	0.4195245774506064	6				NaN	NaN	0	NaN	5639	3013	8652
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8655	24.914	NaN	21667	30	0	6691.9	0.106			+	20769	KHLNELPEL	9	98	546.8057227151257	1091.5968924970514	2	546.3087768554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KHLNELPEL_	REV__ENSG00000170921|ENST00000689528|TANC2;REV__nc|ENSG00000170921|Q9HCD6-2|TANC2;REV__nc|ENSG00000170921|Q9HCD6-3|TANC2;REV__nc|ENSG00000170921|Q9HCD6-4|TANC2;REV__nc|ENSG00000170921|Q9HCD6|TANC2;REV__TANC2|p.L657Sfs*6|1|0.02|ENSG00000170921|chr17:63354997-63354998|-/T|frameshift_variant;REV__TANC2|p.P1519Lfs*33|3|0.27|ENSG00000170921|chr17:63420533-63420533|C/-|frameshift_variant	60.97194046774394	0.20551255781574032	6				NaN	NaN	0	NaN	5640	3013	8652
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8656	24.916	NaN	29984	30	0	8839.8	0.106				-1	LLTLMKLED	9	84	364.5398777847905	1090.5978039545716	3	364.5412902832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_LLTLM(Oxidation (M))KLED_	ENSG00000130653|ENST00000406427|PNPLA7;nc|ENSG00000130653|Q6ZV29-3|PNPLA7;nc|ENSG00000130653|Q6ZV29-4|PNPLA7;nc|ENSG00000130653|Q6ZV29|PNPLA7;PNPLA7|p.G1083Afs*19|1|0.2|ENSG00000130653|chr9:137463435-137463435|C/-|frameshift_variant	20.94693142431847	0.6074874384046576	6				NaN	NaN	0	NaN	5641	3013	8652
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8657	24.918	NaN	6351.1	30	0	501.8	0.106			+	42034	SWCRFILKQ	9	80	619.3283934849018	1236.6422340366034	2	619.3302612304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_SWC(Carbamidomethyl (C))RFILKQ_	REV__ENST00000338785.7_1_21:38884979-38885171:+|nuORF	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	5642	3013	8652
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8658	24.919	NaN	19969	30	0	2855.8	0.035			+	27395	MKNNPKRC	8	81	495.7525861034452	989.4906192736904	2	495.75360107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MKNNPKRC_	REV__tr|U7T245|U7T245_FUSNUUDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanineligaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=murFPE=3SV=1	68.484700416344	0.4195245774506064	6				NaN	NaN	0	NaN	5643	3013	8652
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8676	24.957	NaN	71445	30	0	20227	0.171	+			39944	STMGYMAAK	9	81	480.2182411158017	958.4219292984034	2	480.2195739746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STMGYMAAK_	ENSG00000080824|ENST00000216281|HSP90AA1;ENST00000436135.1_1_1:158495283-158495625:+|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1	153.03582135801034	0.006161527642367307	6				NaN	NaN	0	NaN	5658	3016	8675
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8677	24.959	NaN	27763	30	0	3086.2	0.106			+	39771	STKDKGNTAGA	11	88	525.2651174758962	1048.5156820185923	2	525.266845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STKDKGNTAGA_	REV__ENSG00000183036|ENST00000328619|PCP4	63.42647028704847	0.292869158926425	6				NaN	NaN	0	NaN	5659	3016	8675
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8678	24.962	NaN	33563	30	0	9861.5	0.106				-1	 	0	92	344.8721270225278	1031.5945516677834	3	344.873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5660	3016	8675
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8679	24.963	NaN	10322	30	0	2646.2	0.106	+			14571	GTFQTTMTK	9	70	507.7499362023029	NaN	0	507.74969482421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTFQTTMTK_	ENSG00000085719|ENST00000517490|CPNE3;ENST00000517862.1_1_8:87552529-87557099:+|nuORF	89.02883481214508	0.043554178677197526	6				NaN	NaN	0	NaN	5661	3016	8675
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8680	24.965	NaN	10948	30	0	1486.3	0.106	+			12717	GEKTAGINV	9	82	444.74211009751565	887.4696672618313	2	444.7425842285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GEKTAGINV_	ENSG00000115484|ENST00000394440|CCT4;nc|ENSG00000115484|P50991-2|CCT4	85.86182877749512	0.07653218437724067	6				NaN	NaN	0	NaN	5662	3016	8675
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8681	24.967	NaN	7649.7	30	0	1616.8	0.106			+	31623	QMEQGPNAT	9	70	488.2140883951057	974.4136238570114	2	488.21533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QMEQGPNAT_	REV__ENSG00000100884|ENST00000689861|CPNE6;REV__ENST00000558995.5_1_14:24543475-24546936:+|nuORF;REV__nc|ENSG00000100884|O95741-2|CPNE6	49.44154591367651	0.3095138337212152	6				NaN	NaN	0	NaN	5663	3016	8675
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8682	24.969	NaN	14008	30	0	2001.8	0.034	+			24637	LGSRMHCI	8	73	458.72848136977586	915.4424098063517	2	458.7295227050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LGSRMHCI_	ENST00000438393.5_1_22:50167190-50167259:-|nuORF	55.50420428727701	0.5462892107279674	6				NaN	NaN	0	NaN	5664	3016	8675
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8700	25.005	NaN	16873	30	0	2319.9	0.214	+			44200	TRGGGHRP	8	73	419.2257732829424	836.4369936326848	2	419.226806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TRGGGHRP_	ENSG00000172732|ENST00000308110|MUS81;ENST00000530928.5_1_11:65630557-65632047:+|nuORF	57.81127852772723	0.5234495074909924	6				NaN	NaN	0	NaN	5679	3019	8699
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8701	25.009	NaN	30412	30	0	2200.4	0.106			+	36777	SIAMYLEY	8	98	516.2418634981642	1030.4691740631283	2	516.2435302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SIAMYLEY_	REV__ENSG00000069329|ENST00000299138|VPS35;REV__ENST00000568784.6_1_16:46694386-46722246:-|nuORF;REV__VPS35|p.K61N|1|0.09|ENSG00000069329|chr16:46682095-46682095|C/A|missense_variant	57.81127852772723	0.5234495074909924	6				NaN	NaN	0	NaN	5680	3019	8699
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8702	25.011	NaN	10116	30	0	3147.8	0.106	+			16946	HPNNVVSVKY	10	79	578.8076569801955	1155.6007610271909	2	578.8094482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HPNNVVSVKY_	ENSG00000139116|ENST00000361418|KIF21A;ENST00000547733.1_1_12:39688228-39705384:-|nuORF;KIF21A|p.P1541Lfs*6|1|0.27|ENSG00000139116|chr12:39303074-39303074|G/-|frameshift_variant;nc|ENSG00000139116|Q7Z4S6-2|KIF21A;nc|ENSG00000139116|Q7Z4S6-3|KIF21A;nc|ENSG00000139116|Q7Z4S6-4|KIF21A;nc|ENSG00000139116|Q7Z4S6-5|KIF21A;nc|ENSG00000139116|Q7Z4S6-6|KIF21A	143.37361013837676	0.009854612225601756	6				NaN	NaN	0	NaN	5681	3019	8699
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8703	25.013	NaN	18091	30	0	3044.2	0.106	+			40178	STQSLSLQR	9	98	510.27733704792854	1018.5401211626571	2	510.2794189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STQSLSLQR_	ENSG00000187479|ENST00000617612|C11orf96;nc|nan|Q7Z7L8|C11orf96	83.6470233535746	0.08277643980271215	6				NaN	NaN	0	NaN	5682	3019	8699
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8704	25.015	NaN	28220	30	0	8635.7	0.106				-1	 	0	85	450.2620559296751	898.5095589261502	2	450.26336669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5683	3019	8699
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8705	25.016	NaN	20281	30	0	6262.9	0.106	+			24613	LGRSLGPGGRR	11	76	375.89121756340256	1124.6518232904077	3	375.8924560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LGRSLGPGGRR_	ENST00000216373.9_1_14:50671095-50698242:-|nuORF	36.31764250033197	0.6083289427130232	6				NaN	NaN	0	NaN	5684	3019	8699
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8706	25.018	NaN	12521	30	0	1231.6	0.036	+			37893	SNYNLPMHK	9	85	552.2682785463446	1102.5220041594891	2	552.2694091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SNYNLPMHK_	ENSG00000174444|ENST00000307961|RPL4;ENST00000422486.1_1_3:185135660-185136437:-|nuORF;ENST00000567229.5_1_15:66791747-66793486:-|nuORF	114.85826248499774	0.024312442104607014	6				NaN	NaN	0	NaN	5685	3019	8699
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8724	25.055	NaN	613000	30	0	282390	0.127				-1	 	0	65	322.19266863138114	642.3707843295623	2	322.19366455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5700	3022	8723
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8725	25.057	NaN	49400	30	0	13548	0.106	+			9654	ELSKAKEII	9	88	344.2083731798309	1029.6032901396927	3	344.20965576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ELSKAKEII_	DST|p.K5076Nfs*24|1|0.31|ENSG00000151914|chr6:56472218-56472218|T/-|frameshift_variant;DST|p.T4428Nfs*23|1|0.12|ENSG00000151914|chr6:56497896-56497897|-/T|frameshift_variant;ENSG00000151914|ENST00000680361|DST;nc|ENSG00000151914|Q03001-9|DST;nc|ENSG00000151914|Q03001|DST	118.74307786436346	0.02196067127630568	6				NaN	NaN	0	NaN	5701	3022	8723
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8726	25.059	NaN	62874	30	0	5376.9	0.106	+			17454	ICEGSIKHF	9	100	517.2600929303627	1032.5056329275253	2	517.2619018554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ICEGSIKHF_	ENST00000452150.6_1_6:131179278-131188835:-|nuORF	66.42927471994793	0.16001998865088202	6				NaN	NaN	0	NaN	5702	3022	8723
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8727	25.061	NaN	12992	30	0	2298.2	0.106	+			4371	ATGTFKAKAL	10	72	336.5344378546052	NaN	0	336.53558349609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATGTFKAKAL_	ENSG00000179094|ENST00000317276|PER1;nc|ENSG00000179094|O15534-4|PER1;PER1|p.A962Pfs*160|1|0.38|ENSG00000179094|chr17:8143454-8143454|C/-|frameshift_variant	29.14955571784316	0.4044631218331212	6				NaN	NaN	0	NaN	5703	3022	8723
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8728	25.062	NaN	14384	30	0	2272.2	0.106				-1	RQEMMREKEER	11	87	769.3644021765198	1536.7142514198395	2	769.3662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_RQEMM(Oxidation (M))REKEER_	nc|ENSG00000174450|Q8N9W4-2|GOLGA6L2	18.262085536374414	0.7849791996189919	6				NaN	NaN	0	NaN	5704	3022	8723
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8729	25.064	NaN	9877.9	30	0	923.54	0.106			+	37717	SLSVDEVVP	9	75	472.7515651614718	943.4885773897436	2	473.25372314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLSVDEVVP_	REV__ENSG00000110002|ENST00000456829|VWA5A;REV__VWA5A|p.D571Mfs*3|1|0.56|ENSG00000110002|chr11:124137094-124137094|A/-|frameshift_variant	63.30626980617807	0.18605348971131092	6				NaN	NaN	0	NaN	5705	3022	8723
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8730	25.066	NaN	12804	30	0	1808.3	0.035				-1	 	0	72	505.76532991707666	1009.5161069009533	2	505.76708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5706	3022	8723
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8748	25.103	NaN	38510	30	0	7937.1	0.214	+			33622	RLSRATRKA	9	104	529.8306385398605	1057.646724146521	2	529.8323974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RLSRATRKA_	ENSG00000169860|ENST00000305097|P2RY1	68.84614121027924	0.14577793175421136	6				NaN	NaN	0	NaN	5721	3025	8747
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8749	25.107	NaN	39295	30	0	5161.9	0.106	+			33966	RSDTPLIYK	9	104	546.8057227151257	1091.5968924970514	2	546.8065185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RSDTPLIYK_	ENSG00000196305|ENST00000443024|IARS1	58.2462437865262	0.22823408064396822	6				NaN	NaN	0	NaN	5722	3025	8747
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8750	25.109	NaN	12304	30	0	1038.7	0.106				-1	GEKPYACTVC	10	80	564.248755346957	NaN	0	564.248779296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_GEKPYACTVC(Carbamidomethyl (C))_	ENSG00000198453|ENST00000333987|ZNF568;nc|ENSG00000291239|Q3ZCX4-2|ZNF568	45.97224482568171	0.33106653400957564	6				NaN	NaN	0	NaN	5723	3025	8747
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8751	25.111	NaN	9288.8	30	0	1445.1	0.106				-1	 	0	82	453.2493543536123	904.4841557740247	2	453.2503967285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5724	3025	8747
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8752	25.113	NaN	16497	30	0	1480.4	0.106			+	9397	EKEPDQLQK	9	86	557.788641758661	1113.562730584122	2	557.791259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EKEPDQLQK_	REV__PLIN3|p.G311D|1|0.24|ENSG00000105355|chr19:4844696-4844696|C/T|missense_variant	131.61620852596164	0.014413238321579053	6				NaN	NaN	0	NaN	5725	3025	8747
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8753	25.115	NaN	6980.5	30	0	839.95	0.038				-1	 	0	81	611.8232502167767	1221.6319475003534	2	611.824951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5726	3025	8747
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8754	25.115	NaN	40696	30	0	12684	0.146			+	33367	RHRESLRIQ	9	99	398.8982861215404	1193.6730289648212	3	398.89947509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RHRESLRIQ_	REV__sp|F5HEN8|HELI_HCMVMDNAreplicationhelicaseOS=Humancytomegalovirus(strainMerlin)OX=295027GN=HELIPE=3SV=1;REV__sp|P16736|HELI_HCMVADNAreplicationhelicaseOS=Humancytomegalovirus(strainAD169)OX=10360GN=HELIPE=3SV=1	47.95952297671804	0.32689736945648856	6				NaN	NaN	0	NaN	5727	3025	8747
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8772	25.155	NaN	115820	30	0	15579	0.214				-1	 	0	112	444.7309224327759	887.4472919323518	2	444.7321472167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5742	3028	8771
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8773	25.158	NaN	76124	30	0	16737	0.106			+	13455	GLIVGPLSL	9	94	434.7788173681685	867.543081803137	2	434.7799377441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GLIVGPLSL_	REV__ENSG00000188886|ENST00000342380|ASTL	40.5726180659479	0.4135428067754104	6				NaN	NaN	0	NaN	5743	3028	8771
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8774	25.161	NaN	7995.5	30	0	692.49	0.106	+			44689	TTIEEDKSVLK	11	79	631.8431978570422	1261.6718427808844	2	631.8458251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TTIEEDKSVLK_	ENSG00000183576|ENST00000331768|SETD3	158.47086538638308	5.640651670997326E-05	6				NaN	NaN	0	NaN	5744	3028	8771
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8775	25.162	NaN	23110	30	0	1675.6	0.106			+	-1	EDLTKLLLM	9	110	364.5398777847905	1090.5978039545716	3	364.8733215332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_EDLTKLLLM(Oxidation (M))_	REV__ENST00000295326.4_1_2:74362664-74362700:-|nuORF	32.81241826257853	0.4965981579233955	6				NaN	NaN	0	NaN	5745	3028	8771
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8776	25.164	NaN	46302	30	0	6323.7	0.106				-1	YLAAVALHIM	10	111	373.2099345425068	NaN	0	373.2105407714844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_YLAAVALHIM(Oxidation (M))_	ENSG00000112053|ENST00000490799|SLC26A8;ENST00000486155.1_1_6:35928714-35992326:-|nuORF;nc|ENSG00000112053|Q96RN1-4|SLC26A8;SLC26A8|p.F647Lfs*4|1|0.31|ENSG00000112053|chr6:35955443-35955443|A/-|frameshift_variant;SLC26A8|p.N595Tfs*4|1|0.04|ENSG00000112053|chr6:35959539-35959540|-/G|frameshift_variant;SLC26A8|p.N842Mfs*2|1|0.8|ENSG00000112053|chr6:35944288-35944288|T/-|frameshift_variant	47.657333605630114	0.3204131577145918	6				NaN	NaN	0	NaN	5746	3028	8771
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8777	25.166	NaN	6928.4	30	0	966.72	0.038				-1	 	0	75	597.8441307083808	1193.6737084835615	2	597.845947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5747	3028	8771
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8778	25.167	NaN	7471.7	30	0	2984.6	0.144				-1	ALMAFLFDL	9	64	352.85261550955715	1055.5360171288714	3	352.85394287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_ALM(Oxidation (M))AFLFDL_	ENSG00000003989|ENST00000494857|SLC7A2;nc|ENSG00000003989|P52569-2|SLC7A2;nc|ENSG00000003989|P52569-3|SLC7A2;SLC7A2|p.V554Sfs*51|1|0.1|ENSG00000003989|chr8:17562093-17562094|-/A|frameshift_variant	20.94693142431847	0.6074874384046576	6				NaN	NaN	0	NaN	5748	3028	8771
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8796	25.206	NaN	58195	30	0	13124	0.207				-1	 	0	75	501.2833905977636	1000.5522282623273	2	501.284912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5763	3031	8795
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8797	25.21	NaN	128570	30	0	40046	0.106	+			10271	ETLRQREL	8	95	522.79395731668	1043.57336170016	2	522.7958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ETLRQREL_	ENSG00000011405|ENST00000691414|PIK3C2A	56.72105179125745	0.5342425954139568	6				NaN	NaN	0	NaN	5764	3031	8795
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8798	25.212	NaN	13555	30	0	1141.5	0.106				-1	 	0	85	480.29084749094085	958.5671420486817	2	480.29205322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5765	3031	8795
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8799	25.214	NaN	13179	30	0	1502.7	0.106	+			22209	KSTSSKLVRN	10	80	560.3283078452131	1118.642062757226	2	560.330322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KSTSSKLVRN_	ENST00000435581.7_1_X:2573089-2573287:+|nuORF	83.6470233535746	0.16744595502813267	6				NaN	NaN	0	NaN	5766	3031	8795
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8800	25.215	NaN	26103	30	0	5988.4	0.106			+	-1	LYGCHRGM	8	74	476.7103013758314	951.4060498184629	2	476.7114562988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_LYGCHRGM(Oxidation (M))_	REV__ENSG00000067057|ENST00000381125|PFKP;REV__ENSG00000141959|ENST00000349048|PFKL;REV__ENSG00000152556|ENST00000359794|PFKM;REV__ENST00000397961.6_1_21:45725201-45746742:+|nuORF;REV__ENST00000466134.5_1_21:45719988-45734072:+|nuORF;REV__ENST00000546964.5_1_12:48513149-48528944:+|nuORF;REV__nc|ENSG00000067057|Q01813-2|PFKP;REV__nc|ENSG00000141959|P17858-2|PFKL;REV__nc|ENSG00000152556|P08237-2|PFKM;REV__nc|ENSG00000152556|P08237-3|PFKM;REV__PFKL|p.P704Qfs*6|1|0.29|ENSG00000141959|chr21:44326177-44326177|C/-|frameshift_variant;REV__PFKM|p.A266Efs*59|1|0.04|ENSG00000152556|chr12:48134991-48134992|-/AGGGATTT|frameshift_variant;REV__PFKP|p.R265Gfs*2|3|0.32|ENSG00000067057|chr10:3107226-3107226|A/-|frameshift_variant	37.028477286268924	0.6747514403204248	6				NaN	NaN	0	NaN	5767	3031	8795
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8801	25.217	NaN	24945	30	0	2022.8	0.036	+			43185	TETTKFEKL	9	90	548.7983751103284	NaN	0	548.798583984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TETTKFEKL_	CC2D1A|p.G898Vfs*45|1|0.32|ENSG00000132024|chr19:13929638-13929638|G/-|frameshift_variant;ENSG00000132024|ENST00000318003|CC2D1A;ENST00000589138.5_1_19:14029331-14037891:+|nuORF;ENST00000589224.1_1_19:14034393-14038165:+|nuORF;nc|ENSG00000132024|Q6P1N0-2|CC2D1A	126.24258497203832	0.0011674249988053026	6				NaN	NaN	0	NaN	5768	3031	8795
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8802	25.218	NaN	16216	30	0	1123.8	0.14				-1	 	0	97	514.3093385815904	1026.6041242299807	2	514.3109741210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5769	3031	8795
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8820	25.257	NaN	78036	30	0	6274.8	0.213				-1	 	0	113	487.81440480072047	973.614256668241	2	487.8157043457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5784	3034	8819
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8821	25.261	NaN	21713	30	0	3258.9	0.106				-1	 	0	89	532.2907942184378	1062.5670355036755	2	532.2930297851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5785	3034	8819
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8822	25.263	NaN	17469	30	0	9740	0.106	+			13883	GRARLPNGDTY	11	68	610.3129066834413	1218.6112604336824	2	610.3147583007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GRARLPNGDTY_	ENSG00000160188|ENST00000291536|RSPH1;ENST00000493019.1_1_21:43906458-43916296:-|nuORF	42.33807565288922	0.5259510355945483	6				NaN	NaN	0	NaN	5786	3034	8819
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8823	25.265	NaN	29315	30	0	11198	0.106			+	10891	FCPAAPLEPFK	11	62	407.210779204821	1218.610508214663	3	407.2120666503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FCPAAPLEPFK_	REV__ENSG00000212864|ENST00000391553|RNF208;REV__RNF208|p.D81Gfs*20|1|0.34|ENSG00000212864|chr9:137220971-137220972|-/C|frameshift_variant;REV__RNF208|p.D81Tfs*38|1|0.53|ENSG00000212864|chr9:137220972-137220972|C/-|frameshift_variant	17.16674453292914	0.7901079503840427	6				NaN	NaN	0	NaN	5787	3034	8819
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8824	25.267	NaN	9063.8	30	0	862.91	0.106	+			30214	PSRQTNTSY	9	77	527.2522328160838	1052.4899126989676	2	527.2538452148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PSRQTNTSY_	ENST00000606225.1_1_15:64464132-64481629:-|nuORF	30.503639358989545	0.5181749237905803	6				NaN	NaN	0	NaN	5788	3034	8819
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8825	25.268	NaN	13078	30	0	1046.9	0.036				-1	 	0	89	552.29907311357	1102.5835932939399	2	552.3012084960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5789	3034	8819
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8826	25.269	NaN	9482.8	30	0	1506.6	0.145	+			50132	WIDPVLRPL	9	84	370.2226493303181	1107.6461185911544	3	370.2239685058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_WIDPVLRPL_	ENST00000520804.1_1_8:101733810-101734948:-|nuORF;ENST00000522720.1_1_8:101733810-101734948:-|nuORF	31.529811441608018	0.5085848003137583	6				NaN	NaN	0	NaN	5790	3034	8819
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8844	25.309	NaN	247090	30	0	33661	0.203			+	33640	RMAVSVMR	8	91	483.25496578792223	964.4953786426445	2	483.2559814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_RMAVSVM(Oxidation (M))R_	REV__ENSG00000187474|ENST00000339223|FPR3;REV__FPR3|p.F293Lfs*21|1|0.42|ENSG00000187474|chr19:51824622-51824622|T/-|frameshift_variant	116.90359126533652	0.23898233959989007	6				NaN	NaN	0	NaN	5805	3037	8843
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8845	25.312	NaN	127610	30	0	64950	0.106				-1	 	0	102	487.2675461341354	972.5205393350708	2	487.2690124511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5806	3037	8843
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8846	25.314	NaN	67616	30	0	26053	0.106				-1	GLSCIIGFFL	10	94	376.2038879569539	1125.5898344710617	3	376.20501708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_GLSC(Carbamidomethyl (C))IIGFFL_	ENST00000371602.8_1_20:49507223-49507301:-|nuORF	45.97224482568171	0.49411383603842696	6				NaN	NaN	0	NaN	5807	3037	8843
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8847	25.316	NaN	18012	30	0	3711	0.106				-1	 	0	70	429.70763688199605	857.4007208307921	2	429.708740234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5808	3037	8843
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8848	25.318	NaN	29133	30	0	3917.8	0.106				-1	 	0	92	535.2783623081376	1068.5421716830751	2	535.2799072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5809	3037	8843
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8849	25.32	NaN	33459	30	0	3143.8	0.037	+			15322	GTVIHFNNPK	10	96	563.8033020158539	1125.5920510985077	2	563.8049926757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTVIHFNNPK_	ENSG00000134717|ENST00000313334|BTF3L4;ENSG00000145741|ENST00000380591|BTF3;nc|ENSG00000134717|Q96K17-2|BTF3L4;nc|ENSG00000145741|P20290-2|BTF3	124.08010499294276	0.021567188538240013	6				NaN	NaN	0	NaN	5810	3037	8843
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8850	25.32	NaN	10003	30	0	1107.2	0.14			+	21220	KLGDLNRLT	9	84	515.3050138784151	1028.5954748236302	2	515.306396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KLGDLNRLT_	REV__ENST00000315872.10_1_2:11334463-11335121:-|nuORF	69.6276240434122	0.14239879520340665	6				NaN	NaN	0	NaN	5811	3037	8843
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8868	25.357	NaN	38527	30	0	18135	0.214			+	31016	QESVTKKDLGH	11	94	414.55464538608067	1240.642106758442	3	414.5556335449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QESVTKKDLGH_	REV__ENSG00000156650|ENST00000287239|KAT6B;REV__KAT6B|p.K962Sfs*2|1|0.13|ENSG00000156650|chr10:75021146-75021146|A/-|frameshift_variant;REV__KAT6B|p.L1460*|1|0.36|ENSG00000156650|chr10:75029198-75029198|T/-|frameshift_variant;REV__KAT6B|p.R1133Gfs*12|1|0.07|ENSG00000156650|chr10:75024979-75024979|A/-|frameshift_variant;REV__KAT6B|p.S371Hfs*86|1|0.14|ENSG00000156650|chr10:74975443-74975443|G/-|frameshift_variant;REV__nc|ENSG00000156650|Q8WYB5-2|KAT6B;REV__nc|ENSG00000156650|Q8WYB5-3|KAT6B	36.527901853580055	0.6054519527965578	6				NaN	NaN	0	NaN	5826	3040	8867
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8869	25.36	NaN	10483	30	0	1306.3	0.106				-1	 	0	78	466.25672229487986	930.4988916565597	2	466.2580871582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5827	3040	8867
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8870	25.363	NaN	26288	30	0	3361.8	0.106	+			39956	STMGYMMAK	9	89	518.2169418350728	1034.4193307369455	2	518.2196655273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_STMGYMM(Oxidation (M))AK_	ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;ENST00000518337.1_1_8:74128289-74128592:-|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P	77.31757898189308	0.1091473830098891	6				NaN	NaN	0	NaN	5828	3040	8867
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8871	25.364	NaN	15480	30	0	2063.6	0.106	+			32552	QVTPEFRTV	9	90	538.7907289055128	1075.5669048778254	2	538.7929077148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QVTPEFRTV_	ENSG00000135925|ENST00000258411|WNT10A	82.24051045832904	0.08786059719216216	6				NaN	NaN	0	NaN	5829	3040	8867
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8872	25.366	NaN	8427.1	30	0	1131.9	0.106				-1	CCLSKMMY	8	71	497.6970273139703	993.3795016947406	2	497.6983947753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_CCLSKM(Oxidation (M))MY_	ENST00000373299.4_1_9:130428541-130430393:+|nuORF	28.2542754592877	0.7411748056684583	6				NaN	NaN	0	NaN	5830	3040	8867
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8873	25.368	NaN	11260	30	0	3311.6	0.036	+			35483	SATGKHPILT	10	64	342.19806282527617	1023.5723590760285	3	342.1991882324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SATGKHPILT_	ENST00000551834.5_3_12:56547288-56547546:+|nuORF	25.57405402267927	0.6709832231498071	6				NaN	NaN	0	NaN	5831	3040	8867
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8874	25.369	NaN	10963	30	0	753.9	0.14			+	37517	SLLLRVRGH	9	86	525.8301540416917	1049.6457551501833	2	525.8318481445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SLLLRVRGH_	REV__ENSG00000137154|ENST00000380394|RPS6	29.14955571784316	0.5308295550522326	6				NaN	NaN	0	NaN	5832	3040	8867
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8892	25.407	NaN	62159	30	0	11808	0.214	+			27159	MCQRRQCE	8	96	527.2226257232838	1052.4306985133676	2	527.224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MCQRRQCE_	ENST00000443617.6_1_15:63937230-63937861:-|nuORF	57.81127852772723	0.5234495074909924	6				NaN	NaN	0	NaN	5847	3043	8891
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8893	25.411	NaN	49498	30	0	16414	0.106	+			18745	ITKMKMKKQ	9	92	379.2277774887364	1134.6615030664093	3	379.2289123535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ITKMKMKKQ_	ENST00000343505.9_2_6:138768140-138794549:-|nuORF	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	5848	3043	8891
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8894	25.413	NaN	25526	30	0	1948.9	0.106	+			43229	TEVLKTHGL	9	86	499.2872733723632	NaN	0	499.28717041015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TEVLKTHGL_	ENSG00000142541|ENST00000391857|RPL13A	136.98908636845044	0.00038087405662700757	6				NaN	NaN	0	NaN	5849	3043	8891
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8895	25.415	NaN	23084	30	0	2017.7	0.106			+	9481	EKRKEPDQI	9	108	381.5436750017603	1141.6091956054809	3	381.5447998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EKRKEPDQI_	REV__VIPAS39|p.D268E|1|0.43|ENSG00000151445|chr14:77437840-77437840|G/C|missense_variant	45.02220120713402	0.3613509778819777	6				NaN	NaN	0	NaN	5850	3043	8891
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8896	25.417	NaN	12489	30	0	3661.5	0.106				-1	 	0	55	396.2410426123385	790.467532291477	2	396.2422790527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5851	3043	8891
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8897	25.418	NaN	9680.9	30	0	1991.6	0.035			+	-1	AAGPLPKPSK	10	64	336.5344378546052	NaN	0	336.5342102050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))AAGPLPKPSK_	REV__ENST00000580948.1_1_17:70416883-70417330:-|nuORF	25.57405402267927	0.4162033004763879	6				NaN	NaN	0	NaN	5852	3043	8891
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8898	25.419	NaN	9458	30	0	1427.2	0.139				-1	 	0	76	491.7804148776307	981.5462768220614	2	491.7817077636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5853	3043	8891
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8916	25.458	NaN	132210	30	0	16863	0.149	+			7878	DRLNNFVEG	9	95	532.2618661838893	1062.5091794345785	2	532.2640380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DRLNNFVEG_	tr|U7SRU2|U7SRU2_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01428PE=4SV=1	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	5868	3046	8915
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8917	25.461	NaN	37930	30	0	3065.6	0.106	+			10748	FAEGQGRAL	9	92	474.74823847626146	947.481924019323	2	474.7495422363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FAEGQGRAL_	ENSG00000103335|ENST00000301015|PIEZO1;PIEZO1|p.A2395Pfs*117|1|0.37|ENSG00000103335|chr16:88716061-88716067|CCCCGCA/-|frameshift_variant;PIEZO1|p.F1977Lfs*33|1|0.38|ENSG00000103335|chr16:88720403-88720403|A/-|frameshift_variant	72.87924865735499	0.12833875048249987	6				NaN	NaN	0	NaN	5869	3046	8915
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8918	25.463	NaN	54689	30	0	18546	0.106	+			46150	VDREVPVAA	9	88	478.26377323133283	NaN	0	478.2637634277344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VDREVPVAA_	ENSG00000122711|ENST00000379721|SPINK4	85.16082228582465	0.053699699744190164	6				NaN	NaN	0	NaN	5870	3046	8915
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8919	25.465	NaN	54165	30	0	8317.1	0.106			+	42074	SYDTFHVSK	9	83	542.2587720921427	1082.5029912510854	2	542.260986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SYDTFHVSK_	REV__ENSG00000163701|ENST00000383814|IL17RE;REV__ENST00000383815.7_1_3:9944714-9956386:+|nuORF;REV__nc|ENSG00000163701|Q8NFR9-2|IL17RE;REV__nc|ENSG00000163701|Q8NFR9-3|IL17RE;REV__nc|ENSG00000163701|Q8NFR9-4|IL17RE	71.87747018426188	0.13267044672804276	6				NaN	NaN	0	NaN	5871	3046	8915
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8920	25.467	NaN	12948	30	0	5137.5	0.106				-1	 	0	70	440.2489805107708	878.4834080883417	2	440.25006103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5872	3046	8915
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8921	25.469	NaN	24193	30	0	7769	0.106	+			17364	IALPERKRID	10	76	404.2469963283979	1209.7191595853938	3	404.24822998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IALPERKRID_	tr|U7T6H4|U7T6H4_FUSNURibose-phosphatepyrophosphokinaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=prsPE=3SV=1	29.170058357718403	0.6416167986984785	6				NaN	NaN	0	NaN	5873	3046	8915
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8922	25.47	NaN	3468.7	30	0	529.26	0.035				-1	 	0	50	333.1929810822561	996.5571138469684	3	333.1939392089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5874	3046	8915
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8941	25.508	NaN	93284	30	0	4607.9	0.197			+	-1	FAVIKCSLAI	10	110	582.3285247872312	1162.6424966412624	2	582.3302612304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))FAVIKC(Carbamidomethyl (C))SLAI_	REV__GPR173|p.S92I|1|0.68|ENSG00000184194|chrX:53076896-53076896|G/T|missense_variant	42.396135135203025	0.5270658956260207	6				NaN	NaN	0	NaN	5890	3049	8940
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8942	25.511	NaN	33020	30	0	20528	0.106				-1	 	0	73	489.2909628580648	976.5673727829296	2	489.2923583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5891	3049	8940
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8943	25.513	NaN	41879	30	0	9216.7	0.106			+	-1	ICCLRHGSM	9	103	518.2301422221926	1034.4457315111852	2	518.2318115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_ICCLRHGSM(Oxidation (M))_	REV__ENST00000557709.1_1_14:83484701-83484893:-|nuORF	55.50420428727701	0.2510918378945873	6				NaN	NaN	0	NaN	5892	3049	8940
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8944	25.515	NaN	37824	30	0	6450.1	0.106			+	31219	QGTLQQVL	8	82	443.75308279945114	NaN	0	443.7530822753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QGTLQQVL_	REV__ENSG00000182179|ENST00000333486|UBA7	79.45101966838831	1.7418937515398478	6				NaN	NaN	0	NaN	5893	3049	8940
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8945	25.517	NaN	138260	30	0	34967	0.106	+			15214	GTSSMIVPK	9	98	460.2486421791541	918.4827314251082	2	460.25042724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTSSMIVPK_	ENSG00000166167|ENST00000370187|BTRC;nc|ENSG00000166167|Q9Y297-2|BTRC	90.36981228632155	0.0638227155548745	6				NaN	NaN	0	NaN	5894	3049	8940
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8946	25.519	NaN	26159	30	0	9271.2	0.106	+			24916	LKPYDRLLQ	9	84	573.3372701272225	1144.659987321245	2	573.3394775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LKPYDRLLQ_	ENSG00000155974|ENST00000359742|GRIP1;nc|ENSG00000155974|Q9Y3R0-2|GRIP1;nc|ENSG00000155974|Q9Y3R0-3|GRIP1	90.36981228632155	0.0638227155548745	6				NaN	NaN	0	NaN	5895	3049	8940
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8947	25.521	NaN	38801	30	0	12062	0.039			+	32259	QTLLWCDQLAA	11	86	631.3157892474975	1260.617025561795	2	631.3177490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QTLLWCDQLAA_	REV__ENST00000534532.6_1_11:134054823-134055313:-|nuORF	68.84614121027924	0.24535906747804975	6				NaN	NaN	0	NaN	5896	3049	8940
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8965	25.558	NaN	17279	30	0	8922.3	0.214				-1	 	0	64	427.2468979003906	852.4792428675812	2	427.2479248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5911	3052	8964
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8966	25.562	NaN	18388	30	0	2863.1	0.106	+			6967	CPRMRQLA	8	78	495.7525861034452	989.4906192736904	2	495.7583312988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_CPRM(Oxidation (M))RQLA_	ENST00000382952.7_2_4:1205601-1205772:-|nuORF	52.29916861842294	0.578018602984656	6				NaN	NaN	0	NaN	5912	3052	8964
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8967	25.564	NaN	16088	30	0	3808.7	0.106			+	-1	SCECCCAK	8	86	537.6784763897947	1073.3423998463893	2	537.6810913085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	4 Carbamidomethyl (C)	_SC(Carbamidomethyl (C))EC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))AK_	REV__ENSG00000083817|ENST00000196489|ZNF416	31.954861631926434	0.7126016770032289	6				NaN	NaN	0	NaN	5913	3052	8964
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8968	25.566	NaN	16750	30	0	1921.9	0.106	+			20283	KENQVIVRM	9	89	558.8109969220308	1115.6074409108614	2	558.8136596679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KENQVIVRM_	ENSG00000104413|ENST00000433389|ESRP1;ESRP1|p.L333Sfs*55|1|0.35|ENSG00000104413|chr8:94668009-94668009|G/-|frameshift_variant;ESRP1|p.N512Hfs*7|2|0.33|ENSG00000104413|chr8:94674383-94674384|AA/-|frameshift_variant;ESRP1|p.N512Kfs*8|1|0.48|ENSG00000104413|chr8:94674382-94674383|-/A|frameshift_variant;ESRP1|p.N512Tfs*2|2|0.36|ENSG00000104413|chr8:94674383-94674383|A/-|frameshift_variant;nc|ENSG00000104413|Q6NXG1-2|ESRP1;nc|ENSG00000104413|Q6NXG1-3|ESRP1;nc|ENSG00000104413|Q6NXG1-4|ESRP1;nc|ENSG00000104413|Q6NXG1-5|ESRP1	171.53180478179638	0.0025054460641941692	6				NaN	NaN	0	NaN	5914	3052	8964
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8969	25.568	NaN	9830.9	30	0	5196.4	0.106				-1	 	0	62	436.744037646513	871.473522359826	2	436.7451477050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5915	3052	8964
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8970	25.569	NaN	11801	30	0	5170.5	0.035				-1	 	0	57	333.54062008398756	997.6000308521627	3	333.5416259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5916	3052	8964
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8971	25.57	NaN	13954	30	0	2119	0.142			+	35649	SCPLIRLKDG	10	87	367.87441713066994	1100.60142199221	3	367.8756103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SCPLIRLKDG_	REV__ENSG00000082996|ENST00000392894|RNF13;REV__ENST00000493238.1_1_3:149677832-149678888:+|nuORF;REV__nc|ENSG00000082996|O43567-2|RNF13	34.172542307311794	0.6007644933930345	6				NaN	NaN	0	NaN	5917	3052	8964
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8989	25.609	NaN	30430	30	0	7423.3	0.215			+	37809	SMLKVLISF	9	81	519.3072108549743	1036.5998687767485	2	519.3088989257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SMLKVLISF_	REV__ENST00000237281.4_1_6:146127357-146127429:-|nuORF	51.19269402634007	0.2889735674168909	6				NaN	NaN	0	NaN	5932	3055	8988
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8990	25.613	NaN	11906	30	0	1604.5	0.106			+	26912	LYCDKPESI	9	77	534.2579586934002	1066.5013644536002	2	534.2598876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LYCDKPESI_	REV__ENSG00000116678|ENST00000349533|LEPR;REV__nc|ENSG00000116678|P48357-2|LEPR;REV__nc|ENSG00000116678|P48357-3|LEPR;REV__nc|ENSG00000116678|P48357-4|LEPR;REV__nc|ENSG00000116678|P48357-5|LEPR	52.936696900407355	0.27249468807391813	6				NaN	NaN	0	NaN	5933	3055	8988
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8991	25.615	NaN	29793	30	0	3020.3	0.106			+	20210	KELGRRNK	8	92	500.80293593030484	999.5913189274097	2	500.80548095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KELGRRNK_	REV__ENST00000499203.6_1_5:139486000-139486039:-|nuORF	108.08749611321984	0.24621691167378246	6				NaN	NaN	0	NaN	5934	3055	8988
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8992	25.617	NaN	6011.2	30	0	395.93	0.106	+			45635	TYRDVAIEFS	10	77	600.7988257006141	NaN	0	600.7987670898438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TYRDVAIEFS_	ZNF91|p.F15Y|1|0.38|ENSG00000167232|chr19:23374751-23374751|A/T|missense_variant	53.08895987439943	0.2860736266326207	6				NaN	NaN	0	NaN	5935	3055	8988
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8993	25.619	NaN	12896	30	0	2807.8	0.106				-1	CCVLDLYTY	9	88	603.7622178426437	1205.5098827520874	2	603.7642822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))C(Carbamidomethyl (C))VLDLYTY_	ENSG00000116539|ENST00000392403|ASH1L;ENST00000478837.5_1_1:155313099-155314055:-|nuORF;nc|ENSG00000116539|Q9NR48|ASH1L	40.5726180659479	0.4135428067754104	6				NaN	NaN	0	NaN	5936	3055	8988
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8994	25.621	NaN	6770.1	30	0	732.52	0.034	+			47597	VRRIHSPS	8	71	476.2777436527522	950.5409343723044	2	476.2788391113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VRRIHSPS_	ENSG00000125966|ENST00000246186|MMP24	38.80614096846853	0.6637206697844082	6				NaN	NaN	0	NaN	5937	3055	8988
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	8995	25.621	NaN	11501	30	0	1135.2	0.139				-1	 	0	80	469.29377175204024	936.5729905708805	2	469.2950439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5938	3055	8988
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9013	25.66	NaN	11657	30	0	1614.3	0.214				-1	 	0	68	483.25496578792223	964.4953786426445	2	483.2559814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5953	3058	9012
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9014	25.664	NaN	16479	30	0	2490.4	0.106	+			33475	RIVLSNMRMQ	10	87	624.3389731898968	1246.6633934465935	2	624.3409423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RIVLSNMRMQ_	ENSG00000144711|ENST00000613206|IQSEC1;nc|ENSG00000144711|Q6DN90-2|IQSEC1;nc|ENSG00000144711|Q6DN90|IQSEC1	67.49366992349736	0.29779660154124327	6				NaN	NaN	0	NaN	5954	3058	9012
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9015	25.666	NaN	11001	30	0	4739.4	0.106				-1	 	0	63	439.25153704564934	876.4885211580987	2	439.25274658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5955	3058	9012
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9016	25.668	NaN	16789	30	0	8613.4	0.106			+	-1	VYNLIDMAI	9	69	356.51969424445724	1066.5372533335717	3	356.5208435058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_VYNLIDM(Oxidation (M))AI_	REV__ENSG00000117155|ENST00000342203|SSX2IP;REV__ENST00000460500.1_1_1:85128136-85135573:-|nuORF;REV__nc|ENSG00000117155|Q9Y2D8-2|SSX2IP;REV__nc|ENSG00000117155|Q9Y2D8-3|SSX2IP;REV__SSX2IP|p.Q516Gfs*48|1|0.16|ENSG00000117155|chr1:84650487-84650488|-/CA|frameshift_variant	44.116797842482775	0.37197099687881774	6				NaN	NaN	0	NaN	5956	3058	9012
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9017	25.67	NaN	19138	30	0	3620.2	0.106	+			44213	TRKKVNHSR	9	88	375.89116978371715	1124.6516799513515	3	375.892333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TRKKVNHSR_	ENSG00000060069|ENST00000613122|CTDP1;nc|ENSG00000060069|Q9Y5B0-4|CTDP1	29.170058357718403	0.5306379469863586	6				NaN	NaN	0	NaN	5957	3058	9012
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9018	25.672	NaN	14716	30	0	3056.3	0.039			+	48067	VSSPRLRTGEQ	11	100	410.55808917898025	1228.6524381371407	3	410.55938720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VSSPRLRTGEQ_	REV__ENSG00000088179|ENST00000263708|PTPN4;REV__ENST00000488896.1_1_2:120689943-120692535:+|nuORF	73.84112541714126	0.20371746787051248	6				NaN	NaN	0	NaN	5958	3058	9012
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9019	25.672	NaN	15182	30	0	3846.7	0.141				-1	SKASACARKV	10	103	359.8682266103926	NaN	0	359.86944580078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_SKASAC(Carbamidomethyl (C))ARKV_	ENSG00000166246|ENST00000299320|DNAAF8;ENST00000586256.1_1_16:4784633-4796526:+|nuORF	35.17822180527639	0.3846679649904324	6				NaN	NaN	0	NaN	5959	3058	9012
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9037	25.712	NaN	159390	30	0	25709	0.194			+	-1	NEKMRQLQ	8	107	354.85032949969	1061.5291590992701	3	354.85150146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_NEKM(Oxidation (M))RQLQ_	REV__ENSG00000068745|ENST00000328631|IP6K2	64.20726635412375	0.4601301477144759	6				NaN	NaN	0	NaN	5974	3061	9036
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9038	25.715	NaN	76439	30	0	11076	0.106	+			27727	MQLGVHYSK	9	100	531.7742989404665	NaN	0	531.7742309570312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MQLGVHYSK_	ENST00000430246.6_1_14:21731784-21731862:-|nuORF;ENST00000554969.5_1_14:21731484-21731862:-|nuORF	109.47833844074708	0.010168233843482827	6				NaN	NaN	0	NaN	5975	3061	9036
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9039	25.717	NaN	59935	30	0	27194	0.106	+			9773	ENPASWVVAW	10	96	579.7834400944024	1157.5523272556047	2	579.7852172851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ENPASWVVAW_	ENST00000326956.11_1_1:54691347-54691953:-|nuORF	49.536043120802724	0.461275219792494	6				NaN	NaN	0	NaN	5976	3061	9036
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9040	25.719	NaN	24221	30	0	10300	0.106			+	33818	RQSQLVLAK	9	91	348.21737899302616	1041.6303075792785	3	348.2184143066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RQSQLVLAK_	REV__ENSG00000204516|ENST00000252229|MICB;REV__nc|ENSG00000204516|Q29980-2|MICB	75.04331003522576	0.118981335847003	6				NaN	NaN	0	NaN	5977	3061	9036
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9041	25.721	NaN	14167	30	0	7447.2	0.106			+	48777	VTYILLCIL	9	73	350.88059540267346	1049.6199568082204	3	350.8817138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VTYILLCIL_	REV__ENSG00000170088|ENST00000306480|TMEM192;REV__nc|ENSG00000170088|Q8IY95-2|TMEM192;REV__TMEM192|p.C182G|1|0.24|ENSG00000170088|chr4:165088498-165088498|A/C|missense_variant	26.69291269510374	0.5537881896960711	6				NaN	NaN	0	NaN	5978	3061	9036
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9042	25.723	NaN	14993	30	0	2495.7	0.106	+			34064	RSNPYYIVK	9	88	570.3129381471797	1138.6113233611593	2	570.3143920898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RSNPYYIVK_	ENSG00000108055|ENST00000361804|SMC3	75.65223720490533	0.11634833104049533	6				NaN	NaN	0	NaN	5979	3061	9036
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9043	25.724	NaN	9993.5	30	0	4392.9	0.039			+	51016	YKAKAQEYDSD	11	85	659.3041986206107	1316.5938443080213	2	659.3071899414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YKAKAQEYDSD_	REV__ENSG00000138756|ENST00000502613|BMP2K;REV__nc|ENSG00000204113|Q5H9B9|BMP2KL	47.95952297671804	0.44903247279694136	6				NaN	NaN	0	NaN	5980	3061	9036
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9055	25.841	NaN	130740	30	0	12328	0.143				-1	MKTHNCKM	8	89	533.235426668275	1064.4563004033498	2	533.237060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))KTHNC(Carbamidomethyl (C))KM_	ENST00000433933.1_1_2:197127841-197127907:+|nuORF	85.35947970620816	0.2915182781752196	6				NaN	NaN	0	NaN	5989	3064	9054
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9056	25.844	NaN	194860	30	0	144830	0.106				-1	 	0	94	345.20512140523334	1032.5935348159	3	345.2061767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5990	3064	9054
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9057	25.846	NaN	43194	30	0	9079.1	0.106			+	17452	ICDLYLEL	8	96	491.25199875176367	980.4894445703274	2	491.25347900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ICDLYLEL_	REV__ENSG00000113296|ENST00000350881|THBS4	88.64286706044652	0.2815785716369046	6				NaN	NaN	0	NaN	5991	3064	9054
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9058	25.848	NaN	25976	30	0	3307.2	0.106				-1	 	0	90	579.3122519241773	1156.6099509151545	2	579.3140869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5992	3064	9054
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9059	25.85	NaN	57291	30	0	11782	0.106				-1	 	0	79	425.2438711074163	848.4731892816326	2	425.24493408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5993	3064	9054
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9060	25.851	NaN	31360	30	0	4716.3	0.106	+			23800	LCMRRRKP	8	93	530.3044430744914	1058.5943332157826	2	530.30615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LCMRRRKP_	RDX|p.Y291C|1|0.19|ENSG00000137710|chr11:110254033-110254033|T/C|missense_variant	74.51659920185547	0.36926395944126233	6				NaN	NaN	0	NaN	5994	3064	9054
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9061	25.853	NaN	15812	30	0	1310.1	0.035			+	21715	KQKGRQQK	8	89	500.80293593030484	999.5913189274097	2	501.3031311035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KQKGRQQK_	REV__ENSG00000196950|ENST00000359634|SLC39A10;REV__ENST00000430412.5_1_2:196521853-196599762:+|nuORF;REV__ENST00000465851.1_1_2:196545249-196581758:+|nuORF;REV__nc|ENSG00000196950|Q9ULF5-2|SLC39A10	57.81127852772723	0.5234495074909924	6				NaN	NaN	0	NaN	5995	3064	9054
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9062	25.854	NaN	19665	30	0	3707.8	0.144				-1	 	0	102	353.87202364945716	1058.5942415485715	3	353.8729248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	5996	3064	9054
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9080	25.891	NaN	31732	30	0	4516.6	0.214			+	13939	GRSSESQKK	9	97	503.7678060462891	1005.5210591593782	2	503.76922607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GRSSESQKK_	REV__ENSG00000198586|ENST00000431350|TLK1;REV__ENST00000413010.5_1_2:171884913-172016941:-|nuORF;REV__ENST00000486857.5_1_2:171910255-171939320:-|nuORF;REV__nc|ENSG00000198586|Q9UKI8-2|TLK1;REV__nc|ENSG00000198586|Q9UKI8-4|TLK1;REV__nc|ENSG00000198586|Q9UKI8-5|TLK1	85.16082228582465	0.07850854922700509	6				NaN	NaN	0	NaN	6011	3067	9079
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9081	25.895	NaN	31244	30	0	2376.2	0.106				-1	 	0	89	491.28833723110347	980.562121529007	2	491.2896728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6012	3067	9079
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9082	25.897	NaN	21890	30	0	3951.3	0.106			+	31088	QFLASRRR	8	97	517.3039980300816	1032.5934431269632	2	517.3057861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QFLASRRR_	REV__ENST00000375856.4_1_13:110408345-110408618:-|nuORF	84.9155231211612	0.2928622555056503	6				NaN	NaN	0	NaN	6013	3067	9079
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9083	25.899	NaN	14069	30	0	1358.7	0.106	+			15693	GVMVGMGQK	9	73	453.7284882976139	905.4424236620279	2	453.7301940917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GVMVGMGQK_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENST00000457622.1_1_6:46172676-46173294:+|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000473016.1_1_2:74120109-74129648:+|nuORF;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000488967.5_1_10:90706975-90712518:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF	97.47269410471826	0.04379738608259218	6				NaN	NaN	0	NaN	6014	3067	9079
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9084	25.901	NaN	14920	30	0	1594.5	0.106			+	44212	TRKIRHIS	8	84	505.81424569435825	1009.6139384555165	2	505.81561279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TRKIRHIS_	REV__ENSG00000198380|ENST00000357308|GFPT1;REV__nc|ENSG00000198380|Q06210-2|GFPT1	34.172542307311794	0.6954784234644539	6				NaN	NaN	0	NaN	6015	3067	9079
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9085	25.903	NaN	12311	30	0	1593.6	0.034				-1	 	0	79	460.25683983083	918.49912672846	2	460.25799560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6016	3067	9079
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9086	25.903	NaN	15757	30	0	2297.2	0.138			+	115	AAEWQTAC	8	75	440.18682654764984	878.3591001620997	2	440.188232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AAEWQTAC_	REV__HEY2|p.R164W|1|0.68|ENSG00000135547|chr6:125759278-125759278|C/T|missense_variant	53.351449002276354	0.5676011784961348	6				NaN	NaN	0	NaN	6017	3067	9079
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9104	25.942	NaN	39500	30	0	4183.8	0.214	+			4665	ATLQNVLRK	9	96	521.8221920861591	NaN	0	521.8221435546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATLQNVLRK_	ENSG00000108424|ENST00000290158|KPNB1;nc|ENSG00000108424|Q14974-2|KPNB1	164.45504665044191	0.014275169813657222	6				NaN	NaN	0	NaN	6032	3070	9103
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9105	25.946	NaN	59771	30	0	22445	0.106				-1	 	0	94	392.2312822264205	1173.6720172794614	3	392.2325134277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6033	3070	9103
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9106	25.948	NaN	21662	30	0	5731.8	0.106	+			12968	GETGLGKSTL	10	73	481.76103719023854	NaN	0	481.7610778808594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GETGLGKSTL_	ENSG00000125354|ENST00000394610|SEPTIN6;nc|ENSG00000125354|Q14141-3|SEPTIN6;nc|ENSG00000125354|Q14141-4|SEPTIN6;nc|ENSG00000125354|Q14141|SEPTIN6	128.60217544463768	0.01511912466609976	6				NaN	NaN	0	NaN	6034	3070	9103
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9107	25.95	NaN	25730	30	0	3334.8	0.106			+	-1	CPVCEFCC	8	90	537.6784763897947	1073.3423998463893	2	537.6812133789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	3 Carbamidomethyl (C)	_C(Carbamidomethyl (C))PVCEFC(Carbamidomethyl (C))C(Carbamidomethyl (C))_	REV__ENSG00000173662|ENST00000333172|TAS1R1;REV__nc|ENSG00000173662|Q7RTX1-2|TAS1R1;REV__nc|ENSG00000173662|Q7RTX1-4|TAS1R1	21.70233525837049	0.7917639344264583	6				NaN	NaN	0	NaN	6035	3070	9103
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9108	25.952	NaN	25025	30	0	3075.7	0.106			+	27820	MSPPAQPHPP	10	94	529.7580272206509	1057.5015015081017	2	529.7597045898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MSPPAQPHPP_	REV__ENSG00000183248|ENST00000618550|PRR36;REV__nc|ENSG00000183248|Q9H6K5-2|PRR36	53.351449002276354	0.42630798468005626	6				NaN	NaN	0	NaN	6036	3070	9103
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9109	25.954	NaN	39864	30	0	9874.9	0.034	+			50093	WGLVVQCVA	9	79	487.7599008024063	973.5052486716127	2	487.7611389160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_WGLVVQCVA_	ENST00000327827.11_1_16:9212523-9212682:+|nuORF	88.64286706044652	0.06869153472052109	6				NaN	NaN	0	NaN	6037	3070	9103
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9110	25.954	NaN	11344	30	0	1378.9	0.144			+	-1	KKRDGGSCDQY	11	88	657.2986673540297	1312.5827817748593	2	657.30078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_KKRDGGSC(Carbamidomethyl (C))DQY_	REV__ENSG00000109111|ENST00000314616|SUPT6H;REV__nc|ENSG00000109111|Q7KZ85-2|SUPT6H	44.377184641726394	0.49804979881800077	6				NaN	NaN	0	NaN	6038	3070	9103
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9128	25.994	NaN	30317	30	0	7297.6	0.214	+			20321	KEQLEIWH	8	96	361.52563392147476	1081.5550723646243	3	361.52691650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEQLEIWH_	APLP2|p.R400W|1|0.09|ENSG00000084234|chr11:130126807-130126807|C/T|missense_variant	28.2542754592877	0.7411748056684583	6				NaN	NaN	0	NaN	6053	3073	9127
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9129	25.997	NaN	17776	30	0	2739.3	0.106				-1	GVTALSCWL	9	84	503.755014878852	1005.4954768245041	2	503.7564392089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GVTALSC(Carbamidomethyl (C))WL_	ENSG00000120992|ENST00000316963|LYPLA1;ENST00000520718.1_1_8:54960627-54965328:-|nuORF;nc|ENSG00000120992|O75608-2|LYPLA1	53.351449002276354	0.2690372970092375	6				NaN	NaN	0	NaN	6054	3073	9127
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9130	25.999	NaN	57615	30	0	8584.3	0.106	+			27976	MVLTQLGAF	9	106	490.2675053496851	978.5204577661702	2	490.2687072753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MVLTQLGAF_	ENSG00000143753|ENST00000323699|DEGS1	106.41520541750704	0.03265588207292361	6				NaN	NaN	0	NaN	6055	3073	9127
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9131	26.001	NaN	13643	30	0	4030	0.106	+			32527	QVQVVLNQK	9	73	528.3121518444034	1054.6097507556067	2	528.314208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QVQVVLNQK_	ENSG00000140688|ENST00000327237|RUSF1;ENST00000568491.1_1_16:31502158-31504599:-|nuORF;nc|ENSG00000140688|Q96GQ5-2|RUSF1	99.37495909608758	0.03983967222258828	6				NaN	NaN	0	NaN	6056	3073	9127
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9132	26.003	NaN	12080	30	0	6995.5	0.106	+			1753	AIAFQFRLHF	10	57	417.2334455756095	1248.6785073270285	3	417.234619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AIAFQFRLHF_	LGALS14|p.D49A|1|0.12|ENSG00000006659|chr19:39707231-39707231|A/C|missense_variant	44.377184641726394	0.5088115166961078	6				NaN	NaN	0	NaN	6057	3073	9127
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9133	26.005	NaN	22276	30	0	4455.1	0.033	+			24358	LFNAHMGI	8	74	451.73122799272784	901.4479030522557	2	451.7322692871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LFNAHMGI_	ENSG00000117983|ENST00000529681|MUC5B	39.021493756699265	0.6623843612266921	6				NaN	NaN	0	NaN	6058	3073	9127
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9134	26.005	NaN	9321.8	30	0	1433.8	0.139				-1	 	0	81	459.2365522655604	916.4585515979209	2	459.2376708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6059	3073	9127
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9152	26.045	NaN	42366	30	0	5024.8	0.214	+			49916	VYVDAVGQFL	10	84	555.7953274051935	1109.5761018771868	2	555.7973022460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYVDAVGQFL_	CEP104|p.C757Vfs*24|1|0.47|ENSG00000116198|chr1:3825853-3825853|A/-|frameshift_variant;ENSG00000116198|ENST00000378230|CEP104;ENST00000494653.5_1_1:3750422-3768971:-|nuORF;nc|ENSG00000116198|O60308-2|CEP104;nc|ENSG00000116198|O60308-3|CEP104	107.00750918261382	0.05688644658934505	6				NaN	NaN	0	NaN	6074	3076	9151
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9153	26.048	NaN	39034	30	0	6751.4	0.106			+	50253	WPSWLVTY	8	100	526.2669633464454	1050.5193737596908	2	526.2692260742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WPSWLVTY_	REV__ENST00000322723.8_1_2:232319762-232319831:-|nuORF	85.35947970620816	0.2915182781752196	6				NaN	NaN	0	NaN	6075	3076	9151
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9154	26.05	NaN	29311	30	0	8216.1	0.106				-1	 	0	87	364.52471202823887	1090.5523066849166	3	364.5258483886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6076	3076	9151
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9155	26.052	NaN	11479	30	0	1769	0.106			+	33752	RPRGPIKGA	9	78	476.29603260835137	950.5775122835028	2	476.2970886230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RPRGPIKGA_	REV__ENST00000595712.5_3_19:18118126-18119790:+|nuORF	30.503639358989545	0.5181749237905803	6				NaN	NaN	0	NaN	6077	3076	9151
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9156	26.054	NaN	39307	30	0	4342.2	0.106	+			1215	AEQKLQQTL	9	94	529.7945019610747	1057.5744509889494	2	529.7960815429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEQKLQQTL_	ENSG00000131626|ENST00000253925|PPFIA1;nc|ENSG00000131626|Q13136-2|PPFIA1	114.85826248499774	0.024312442104607014	6				NaN	NaN	0	NaN	6078	3076	9151
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9157	26.056	NaN	19767	30	0	4012.9	0.034	+			48069	VSSPTWEN	8	78	460.21165711507496	918.4087612969499	2	460.21295166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VSSPTWEN_	ENSG00000120053|ENST00000370508|GOT1;nc|ENSG00000120053|P17174-2|GOT1	60.97194046774394	0.49215940876911696	6				NaN	NaN	0	NaN	6079	3076	9151
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9158	26.056	NaN	83069	30	0	10268	0.141	+			21225	KLGVHCVTCQ	10	107	544.2729978618278	1086.5314427904555	2	544.2750854492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KLGVHCVTCQ_	BRSK2|p.P580Qfs*55|2|0.16|ENSG00000174672|chr11:1456410-1456410|G/-|frameshift_variant;BRSK2|p.R355Gfs*4|2|0.39|ENSG00000174672|chr11:1445650-1445650|C/-|frameshift_variant;ENSG00000174672|ENST00000528841|BRSK2;nc|ENSG00000174672|Q8IWQ3-2|BRSK2;nc|ENSG00000174672|Q8IWQ3-3|BRSK2;nc|ENSG00000174672|Q8IWQ3-4|BRSK2;nc|ENSG00000174672|Q8IWQ3-5|BRSK2	67.49366992349736	0.29779660154124327	6				NaN	NaN	0	NaN	6080	3076	9151
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9176	26.095	NaN	29875	30	0	6871.6	0.214				-1	 	0	75	480.2132398361138	958.4119267390276	2	480.21435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6095	3079	9175
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9177	26.098	NaN	19886	30	0	4395.1	0.106				-1	 	0	82	469.7676228253966	937.5206927175932	2	469.7687683105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6096	3079	9175
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9178	26.1	NaN	19046	30	0	2077.9	0.106				-1	 	0	92	494.27552336699574	986.5364938007915	2	494.2770690917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6097	3079	9175
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9179	26.102	NaN	21034	30	0	2459.8	0.106				-1	 	0	70	454.28293991343685	906.5513268936737	2	454.28411865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6098	3079	9175
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9180	26.104	NaN	21574	30	0	2450.8	0.106				-1	MAPDIKDQI	9	94	536.7715911633034	1071.5286293934066	2	536.7733154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))MAPDIKDQI_	ENST00000499392.1_1_4:155557516-155649858:+|nuORF	75.04331003522576	0.118981335847003	6				NaN	NaN	0	NaN	6099	3079	9175
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9181	26.106	NaN	9996.4	30	0	683.25	0.035			+	38001	SPLFPLHLA	9	77	497.78971552543084	993.5648781176617	2	497.79119873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SPLFPLHLA_	REV__ENST00000470661.1_1_6:64237905-64286433:+|nuORF	40.5726180659479	0.4135428067754104	6				NaN	NaN	0	NaN	6100	3079	9175
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9182	26.106	NaN	16153	30	0	2668.6	0.14				-1	 	0	82	509.24445634916134	1016.4743597651227	2	509.2458801269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6101	3079	9175
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9200	26.144	NaN	13584	30	0	1027.6	0.214			+	14636	GTGTESRGPGG	11	71	488.228783789696	974.4430146461921	2	488.2299499511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTGTESRGPGG_	REV__ENST00000494295.1_1_X:134477789-134477951:-|nuORF	45.02220120713402	0.4892240028381124	6				NaN	NaN	0	NaN	6116	3082	9199
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9201	26.147	NaN	20133	30	0	4565.1	0.106	+			18712	ITETKRKNT	9	84	364.211990996251	1089.614143588953	3	364.21331787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ITETKRKNT_	ENST00000521853.2_1_11:111942369-111943787:-|nuORF	44.377184641726394	0.36891676396732553	6				NaN	NaN	0	NaN	6117	3082	9199
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9202	26.15	NaN	12202	30	0	1175.5	0.106			+	20389	KESVMDKV	8	73	476.24488201442927	950.4752110956586	2	476.2426452636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_KESVM(Oxidation (M))DKV_	REV__ENSG00000183091|ENST00000397345|NEB;REV__nc|ENSG00000183091|P20929-1|NEB;REV__nc|ENSG00000183091|P20929-3|NEB;REV__nc|ENSG00000183091|P20929-4|NEB	74.25504064058377	0.37144338840759816	6				NaN	NaN	0	NaN	6118	3082	9199
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9203	26.151	NaN	10073	30	0	2059.2	0.106	+			27211	MEHAMETM	8	85	490.1860110165363	978.3574690998727	2	490.1875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MEHAMETM_	ENSG00000197747|ENST00000368811|S100A10;ENST00000478348.1_1_1:151957748-151958706:-|nuORF;ENST00000478574.5_1_1:151956596-151958706:-|nuORF	71.29570347882199	0.39610197767395533	6				NaN	NaN	0	NaN	6119	3082	9199
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9204	26.153	NaN	16785	30	0	4961.6	0.106				-1	 	0	87	550.3564065001779	1098.6982600671556	2	550.3585205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6120	3082	9199
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9205	26.155	NaN	9181.4	30	0	1075.7	0.034				-1	LYQATMAL	8	67	463.7366292215397	925.4587055098795	2	463.7379150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_LYQATM(Oxidation (M))AL_	ENSG00000147813|ENST00000449291|NAPRT;ENST00000462059.1_1_8:144660029-144660488:-|nuORF;NAPRT|p.G402Afs*5|1|0.35|ENSG00000147813|chr8:143575509-143575509|C/-|frameshift_variant;nc|ENSG00000147813|Q6XQN6-2|NAPRT;nc|ENSG00000147813|Q6XQN6-3|NAPRT	60.29395666154354	0.49887135096048313	6				NaN	NaN	0	NaN	6121	3082	9199
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9206	26.156	NaN	41501	30	0	5366.7	0.14	+			45759	VAEENTRVL	9	82	515.7794966010403	NaN	0	515.7801513671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VAEENTRVL_	ENSG00000156256|ENST00000399976|USP16;ENST00000485067.1_1_21:30426080-30426505:+|nuORF;nc|ENSG00000156256|Q9Y5T5-2|USP16;nc|ENSG00000156256|Q9Y5T5-3|USP16;nc|ENSG00000156256|Q9Y5T5-4|USP16	114.8945686534367	0.005276929498059453	6				NaN	NaN	0	NaN	6122	3082	9199
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9224	26.195	NaN	10839	30	0	915.55	0.214	+			28212	NAVAGAVKY	9	78	446.7475943618199	NaN	0	446.7476501464844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NAVAGAVKY_	ENSG00000030066|ENST00000378460|NUP160;ENST00000529863.1_1_11:47861610-47869870:-|nuORF;nc|ENSG00000030066|Q12769-2|NUP160;nc|ENSG00000030066|Q12769|NUP160	76.7741389293348	0.08243745921263976	6				NaN	NaN	0	NaN	6137	3085	9223
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9225	26.199	NaN	21406	30	0	3310.7	0.106	+			12477	GEDRSPPTAL	10	82	521.7627989510764	1041.5110449689528	2	521.7620849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GEDRSPPTAL_	ENSG00000079277|ENST00000371945|MKNK1;nc|ENSG00000079277|Q9BUB5-2|MKNK1;nc|ENSG00000079277|Q9BUB5|MKNK1	56.632244143249146	0.3964695498866976	6				NaN	NaN	0	NaN	6138	3085	9223
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9226	26.201	NaN	15668	30	0	2618.9	0.106				-1	 	0	69	456.7654629109893	911.5163728887786	2	456.7663269042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6139	3085	9223
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9227	26.202	NaN	8820.1	30	0	1221.4	0.106				-1	 	0	69	441.7725100192783	881.5304671053566	2	441.7737121582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6140	3085	9223
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9228	26.204	NaN	11845	30	0	2213.4	0.106	+			20490	KEYQKAIK	8	73	336.5344378546052	NaN	0	336.5342712402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEYQKAIK_	tr|U7SVZ1|U7SVZ1_FUSNUHTHhxlR-typedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01394PE=4SV=1	31.954861631926434	1.7418937515398478	6				NaN	NaN	0	NaN	6141	3085	9223
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9229	26.206	NaN	24131	30	0	2610.8	0.036			+	18090	IKNNNTIQGG	10	106	529.7847698547042	1057.5549867762084	2	529.787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IKNNNTIQGG_	REV__tr|U7T2D7|U7T2D7_FUSNUAutotransporterdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00531PE=4SV=1	63.53385203322761	0.33370026130094593	6				NaN	NaN	0	NaN	6142	3085	9223
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9230	26.207	NaN	17259	30	0	3678.1	0.143	+			46064	VCKIHRML	8	72	339.1895243163405	1014.5467435492216	3	339.1903991699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_VCKIHRM(Oxidation (M))L_	ENSG00000150990|ENST00000308736|DHX37	40.5726180659479	0.6527593143185008	6				NaN	NaN	0	NaN	6143	3085	9223
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9248	26.244	NaN	81442	30	0	10753	0.159				-1	 	0	90	516.2883211159966	1030.5620892987931	2	516.289794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6158	3088	9247
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9249	26.247	NaN	55978	30	0	9317.1	0.106			+	32062	QRYRGRKK	8	90	546.3308448118221	1090.647136690444	2	546.3329467773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QRYRGRKK_	REV__nc|ENSG00000178177|Q8N3X6-2|LCORL;REV__nc|ENSG00000178177|Q8N3X6|LCORL;REV__nc|ENSG00000196233|Q96JN0-2|LCOR;REV__nc|ENSG00000196233|Q96JN0|LCOR	58.78195531508484	0.5138399468736706	6				NaN	NaN	0	NaN	6159	3088	9247
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9250	26.249	NaN	37436	30	0	19448	0.106	+			47717	VSFLVGLIML	10	88	364.5561758477878	1090.6466981435635	3	364.5573425292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VSFLVGLIML_	ENSG00000010379|ENST00000343164|SLC6A13;nc|ENSG00000010379|Q9NSD5-2|SLC6A13	36.446750945000026	0.5818864909973037	6				NaN	NaN	0	NaN	6160	3088	9247
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9251	26.25	NaN	85378	30	0	20382	0.106				-1	 	0	105	374.22787943402943	1119.6618089022884	3	374.22900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6161	3088	9247
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9252	26.252	NaN	26073	30	0	5077.9	0.106	+			44883	TTVPHVFSK	9	86	508.28049182924593	1014.5464307252919	2	508.2823791503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TTVPHVFSK_	ENSG00000095015|ENST00000399503|MAP3K1	96.0336014099291	0.047854655524928534	6				NaN	NaN	0	NaN	6162	3088	9247
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9253	26.254	NaN	11083	30	0	1181.8	0.106	+			8279	EAICSSTKL	9	77	476.24488201442927	950.4752110956586	2	476.248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EAICSSTKL_	ENSG00000173821|ENST00000582970|RNF213;ENST00000559070.5_1_17:78261823-78310301:+|nuORF;nc|ENSG00000173821|Q63HN8-4|RNF213;nc|ENSG00000173821|Q63HN8-5|RNF213;nc|ENSG00000173821|Q63HN8|RNF213;RNF213|p.C5022Lfs*7|1|0.3|ENSG00000173821|chr17:80389237-80389237|G/-|frameshift_variant;RNF213|p.P2167Lfs*64|1|0.09|ENSG00000173821|chr17:80344834-80344835|-/T|frameshift_variant;RNF213|p.Q1953Rfs*50|2|0.13|ENSG00000173821|chr17:80340219-80340219|C/-|frameshift_variant	76.7741389293348	0.11149722112137898	6				NaN	NaN	0	NaN	6163	3088	9247
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9254	26.256	NaN	5447.3	30	0	533.14	0.034	+			24527	LGLCAALPVT	10	72	479.27732684959926	956.5401007659985	2	479.2773132324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LGLCAALPVT_	ENST00000495983.1_1_9:130670673-130672537:-|nuORF	35.61828744233558	0.588957954432594	6				NaN	NaN	0	NaN	6164	3088	9247
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9272	26.292	NaN	130780	30	0	43793	0.192				-1	 	0	98	401.2438332684428	800.4731136036856	2	401.2451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6179	3091	9271
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9273	26.295	NaN	20271	30	0	1568.8	0.106				-1	 	0	85	560.8386946135339	1119.6628362938677	2	560.8404541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6180	3091	9271
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9274	26.297	NaN	30205	30	0	14633	0.106	+			24557	LGLVPSAVL	9	79	434.77884694358465	867.5431409539693	2	434.7800598144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LGLVPSAVL_	ENSG00000162191|ENST00000301935|UBXN1	50.0245360154114	0.3026755932229825	6				NaN	NaN	0	NaN	6181	3091	9271
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9275	26.299	NaN	26000	30	0	3420.3	0.106				-1	 	0	93	460.25713386746395	918.4997148017279	2	460.25836181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6182	3091	9271
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9276	26.301	NaN	10801	30	0	4000	0.106				-1	 	0	63	327.7371485843097	653.4597442354194	2	327.7380676269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6183	3091	9271
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9277	26.303	NaN	26262	30	0	4460.6	0.106	+			19578	KCYEMTDLTNN	11	100	666.281983695315	1330.54941445743	2	666.2843017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KCYEMTDLTNN_	ENSG00000145632|ENST00000274289|PLK2;ENST00000504196.1_1_5:57754793-57755897:-|nuORF;ENST00000514306.1_1_5:57754443-57755636:-|nuORF;ENST00000515415.5_1_5:57754112-57754961:-|nuORF;PLK2|p.E130*|1|0.03|ENSG00000145632|chr5:58458832-58458833|-/A|frameshift_variant;PLK2|p.E130Vfs*4|1|0.05|ENSG00000145632|chr5:58458831-58458832|-/GAGAA|frameshift_variant	58.62960593111931	0.3356877741313683	6				NaN	NaN	0	NaN	6184	3091	9271
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9278	26.305	NaN	6515.8	30	0	654.41	0.036			+	27995	MVTLKRPRG	9	72	353.2158733904839	1056.6257907716517	3	353.21697998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MVTLKRPRG_	REV__CBX2|p.A85V|1|0.35|ENSG00000173894|chr17:79781767-79781767|C/T|missense_variant	37.15910966729921	0.4535818937225704	6				NaN	NaN	0	NaN	6185	3091	9271
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9296	26.342	NaN	51207	30	0	5433.9	0.214				-1	 	0	105	504.80639956044126	1007.5982461876825	2	504.8079528808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6200	3094	9295
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9297	26.346	NaN	42783	30	0	5577.9	0.106	+			10474	EVPSSSGGPLV	11	91	514.766191911282	1027.517830889364	2	514.7667846679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EVPSSSGGPLV_	ENSG00000135100|ENST00000257555|HNF1A;HNF1A|p.H500Tfs*31|1|0.15|ENSG00000135100|chr12:120997658-120997658|C/-|frameshift_variant;HNF1A|p.P379Lfs*5|3|0.42|ENSG00000135100|chr12:120996564-120996564|C/-|frameshift_variant;nc|ENSG00000135100|P20823-2|HNF1A;nc|ENSG00000135100|P20823-3|HNF1A;nc|ENSG00000135100|P20823-6|HNF1A;nc|ENSG00000135100|P20823-7|HNF1A;nc|ENSG00000135100|P20823|HNF1A	39.252832667884924	0.5681665794958463	6				NaN	NaN	0	NaN	6201	3094	9295
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9298	26.348	NaN	70951	30	0	10419	0.106	+			2455	APLKIQAYF	9	109	350.87082436109336	1049.59064368348	3	350.8720397949219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_APLKIQAYF_	ENSG00000114013|ENST00000330540|CD86;nc|ENSG00000114013|P42081-3|CD86;nc|ENSG00000114013|P42081-4|CD86	40.5726180659479	0.4135428067754104	6				NaN	NaN	0	NaN	6202	3094	9295
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9299	26.35	NaN	26425	30	0	10243	0.106			+	49717	VYMPVVDII	9	74	524.7914754907627	1047.5683980483252	2	524.7932739257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VYMPVVDII_	REV__ZSCAN12|p.K467Nfs*109|1|0.22|ENSG00000158691|chr6:28390889-28390889|T/-|frameshift_variant	57.81127852772723	0.2318599694398087	6				NaN	NaN	0	NaN	6203	3094	9295
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9300	26.352	NaN	17276	30	0	4108.9	0.106	+			7003	CRNTEENK	8	80	497.2263148844982	992.4380768357964	2	497.228271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_CRNTEENK_	ENST00000509161.1_1_4:142244738-142244810:-|nuORF	84.9155231211612	0.2928622555056503	6				NaN	NaN	0	NaN	6204	3094	9295
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9301	26.353	NaN	32900	30	0	4271.2	0.037			+	9864	EQEQQQQQL	9	93	579.7732537015631	1157.5319544699262	2	579.7752075195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EQEQQQQQL_	REV__ENSG00000068400|ENST00000376423|GRIPAP1;REV__ENST00000473581.5_1_X:48834665-48847670:-|nuORF;REV__nc|ENSG00000068400|Q4V328-4|GRIPAP1	56.72105179125745	0.24094814563026265	6				NaN	NaN	0	NaN	6205	3094	9295
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9302	26.354	NaN	13344	30	0	3288.5	0.14	+			39356	STCLTSGLK	9	73	483.7492836974987	965.4840144617974	2	483.7497253417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_STC(Carbamidomethyl (C))LTSGLK_	ENSG00000180773|ENST00000326402|SLC36A4;ENST00000527503.1_1_11:92881705-92887463:-|nuORF;nc|ENSG00000180773|Q6YBV0-2|SLC36A4	112.41091882917199	0.026537921851008135	6				NaN	NaN	0	NaN	6206	3094	9295
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9320	26.394	NaN	66281	30	0	22786	0.213				-1	 	0	95	424.2466155215841	846.4786781099682	2	424.2476501464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6221	3097	9319
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9321	26.397	NaN	174530	30	0	49951	0.106	+			15215	GTSSRSTK	8	90	412.21766142452026	822.4207699158405	2	412.218994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTSSRSTK_	ENSG00000115159|ENST00000438166|GPD2;GPD2|p.F204Sfs*10|1|0.44|ENSG00000115159|chr2:156513444-156513444|T/-|frameshift_variant	63.30626980617807	0.4690498839812213	6				NaN	NaN	0	NaN	6222	3097	9319
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9322	26.399	NaN	36741	30	0	5928.9	0.106			+	-1	MFLPEGACEQ	10	85	591.2519187901877	1180.4892846471753	2	591.2539672851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_MFLPEGAC(Carbamidomethyl (C))EQ_	REV__ENST00000503234.5_1_3:126746482-126752857:+|nuORF	49.44154591367651	0.46214596422418036	6				NaN	NaN	0	NaN	6223	3097	9319
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9323	26.401	NaN	26054	30	0	6352.3	0.106				-1	 	0	76	438.2621087410676	874.5096645489352	2	438.26324462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6224	3097	9319
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9324	26.403	NaN	14782	30	0	5133.2	0.106	+			6941	CPFTMARNK	9	77	562.7698266067596	1123.525100280319	2	562.7713012695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_C(Carbamidomethyl (C))PFTMARNK_	ENSG00000118496|ENST00000237281|FBXO30	66.42927471994793	0.16001998865088202	6				NaN	NaN	0	NaN	6225	3097	9319
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9325	26.405	NaN	13561	30	0	7486.9	0.036	+			24156	LELQKTCQP	9	59	353.85608751051234	1058.546433131737	3	353.85748291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LELQKTCQP_	ENST00000457767.5_3_22:40796774-40798180:+|nuORF	44.116797842482775	0.37197099687881774	6				NaN	NaN	0	NaN	6226	3097	9319
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9326	26.405	NaN	20549	30	0	2500.6	0.141	+			28825	NPLQKDPQY	9	94	551.778614653441	1101.5426763736818	2	551.7802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NPLQKDPQY_	ENSG00000115685|ENST00000234038|PPP1R7;nc|ENSG00000115685|Q15435-2|PPP1R7;PPP1R7|p.R330W|1|0.49|ENSG00000115685|chr2:241182728-241182728|C/T|missense_variant	191.44940797552337	0.00014666235100428603	6				NaN	NaN	0	NaN	6227	3097	9319
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9344	26.445	NaN	29810	30	0	3803.9	0.214			+	33787	RQETSRSRH	9	83	578.7996108326506	1155.5846687321011	2	578.8013305664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RQETSRSRH_	REV__ENSG00000176406|ENST00000696799|RIMS2;REV__nc|ENSG00000176406|Q9UQ26-1|RIMS2;REV__nc|ENSG00000176406|Q9UQ26-3|RIMS2;REV__nc|ENSG00000176406|Q9UQ26-8|RIMS2;REV__nc|ENSG00000176406|Q9UQ26|RIMS2	51.33545320467046	0.2872990594074956	6				NaN	NaN	0	NaN	6242	3100	9343
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9345	26.448	NaN	21316	30	0	5643.9	0.106				-1	 	0	77	407.2388627825264	812.4631726318528	2	407.24017333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6243	3100	9343
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9346	26.45	NaN	20390	30	0	3828.5	0.106			+	30042	PPSLPWDSGA	10	78	513.7481578546833	1025.4817627761665	2	513.7496948242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PPSLPWDSGA_	REV__ENST00000573366.5_1_17:4870348-4870435:-|nuORF	56.72105179125745	0.3956618550748046	6				NaN	NaN	0	NaN	6244	3100	9343
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9347	26.452	NaN	41278	30	0	13729	0.106				-1	 	0	84	324.5178358067667	970.5316780205001	3	324.5188293457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6245	3100	9343
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9348	26.454	NaN	22860	30	0	2916.9	0.106	+			14589	GTFVGVHVR	9	74	486.27302256527685	970.5314921973537	2	486.2744445800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTFVGVHVR_	ENSG00000176920|ENST00000425340|FUT2	90.36981228632155	0.0638227155548745	6				NaN	NaN	0	NaN	6246	3100	9343
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9349	26.456	NaN	18949	30	0	3264.1	0.036	+			37770	SLVSVACCSL	10	99	346.8354869892396	1037.4846315679188	3	346.8367004394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_SLVSVAC(Carbamidomethyl (C))CSL_	DNAH14|p.I2559Nfs*2|1|0.39|ENSG00000185842|chr1:225337448-225337449|-/A|frameshift_variant;ENSG00000185842|ENST00000682510|DNAH14;nc|ENSG00000185842|Q0VDD8-4|DNAH14;nc|ENSG00000185842|Q0VDD8|DNAH14	45.02220120713402	0.5028680121232791	6				NaN	NaN	0	NaN	6247	3100	9343
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9350	26.457	NaN	139570	30	0	44841	0.142			+	7440	DFETRIDEL	9	116	379.8510036514377	1136.531181554513	3	379.8524169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DFETRIDEL_	REV__ENSG00000156510|ENST00000354624|HKDC1;REV__ENSG00000156515|ENST00000359426|HK1;REV__ENST00000494253.1_1_10:71098016-71144300:+|nuORF;REV__nc|ENSG00000156510|Q2TB90-2|HKDC1;REV__nc|ENSG00000156510|Q2TB90-3|HKDC1;REV__nc|ENSG00000156515|P19367-2|HK1;REV__nc|ENSG00000156515|P19367-3|HK1;REV__nc|ENSG00000156515|P19367-4|HK1	69.6276240434122	0.14239879520340665	6				NaN	NaN	0	NaN	6248	3100	9343
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9368	26.496	NaN	48346	30	0	4323.5	0.19			+	7441	DFETRIDEL	9	96	569.2733165163364	1136.5320800994728	2	569.2754516601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DFETRIDEL_	REV__ENSG00000156510|ENST00000354624|HKDC1;REV__ENSG00000156515|ENST00000359426|HK1;REV__ENST00000494253.1_1_10:71098016-71144300:+|nuORF;REV__nc|ENSG00000156510|Q2TB90-2|HKDC1;REV__nc|ENSG00000156510|Q2TB90-3|HKDC1;REV__nc|ENSG00000156515|P19367-2|HK1;REV__nc|ENSG00000156515|P19367-3|HK1;REV__nc|ENSG00000156515|P19367-4|HK1	82.7504851949679	0.08565546331141553	6				NaN	NaN	0	NaN	6263	3103	9367
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9369	26.499	NaN	106600	30	0	7344.9	0.106	+			28896	NQKKQNKNK	9	97	565.3246312761273	1128.6347096190545	2	565.3270263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NQKKQNKNK_	ENST00000226319.10_1_4:129795591-129795780:+|nuORF	157.20854538584396	0.0051889325717705	6				NaN	NaN	0	NaN	6264	3103	9367
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9370	26.501	NaN	76801	30	0	18413	0.106				-1	 	0	88	377.21887360451234	1128.634791413737	3	377.22027587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6265	3103	9367
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9371	26.503	NaN	32768	30	0	5873	0.106				-1	 	0	86	343.54038125291925	1027.5993143589578	3	343.5414123535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6266	3103	9367
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9372	26.505	NaN	16264	30	0	1265	0.106	+			27131	MASRSMRL	8	88	492.2416066397745	982.468660346349	2	492.242919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Oxidation (M)	_M(Oxidation (M))ASRSM(Oxidation (M))RL_	chr1:119794685-119799725|262|21.08|0.25|6.41|-|ENST00000530654|REG4,REG4;chr1:119809202-119811409|246|19.99|0.24|6.4|-|ENST00000354219|REG4,REG4;ENSG00000134193|ENST00000256585|REG4;nc|ENSG00000134193|Q9BYZ8-2|REG4	65.46538089061403	0.44767499471257033	6				NaN	NaN	0	NaN	6267	3103	9367
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9373	26.507	NaN	13570	30	0	818.92	0.106	+			6983	CPVVAELLGIK	11	89	571.3361789857372	1140.6578050382743	2	571.33837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_CPVVAELLGIK_	ENSG00000156222|ENST00000394573|SLC28A1	54.776311868738084	0.3700837260462177	6				NaN	NaN	0	NaN	6268	3103	9367
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9374	26.509	NaN	26331	30	0	2967.2	0.035			+	-1	VCQLWTVL	8	78	509.77252726884115	1017.5305016044823	2	509.7743225097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_VC(Carbamidomethyl (C))QLWTVL_	REV__ENSG00000164818|ENST00000297440|DNAAF5;REV__nc|ENSG00000164818|Q86Y56-2|DNAAF5;REV__nc|ENSG00000164818|Q86Y56-3|DNAAF5	73.97473282117947	0.3737790450121076	6				NaN	NaN	0	NaN	6269	3103	9367
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9392	26.546	NaN	26526	30	0	2063.6	0.214	+			18379	IQYANISQI	9	90	525.2850936049706	1048.555634276741	2	525.2871704101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IQYANISQI_	ADAD1|p.K208N|1|0.34|ENSG00000164113|chr4:122396277-122396277|G/T|missense_variant	109.43880257439609	0.029570636687953285	6				NaN	NaN	0	NaN	6284	3106	9391
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9393	26.55	NaN	22012	30	0	9908.8	0.106	+			24335	LFLARLFPL	9	90	363.89875557702527	1088.6744373312758	3	363.89996337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LFLARLFPL_	ENSG00000079134|ENST00000261600|THOC1;ENST00000578529.5_1_18:214628-260326:-|nuORF;ENST00000582313.5_1_18:245829-268019:-|nuORF;nc|ENSG00000079134|Q96FV9-2|THOC1;THOC1|p.D370Mfs*9|1|0.31|ENSG00000079134|chr18:225119-225119|G/-|frameshift_variant;THOC1|p.I431Nfs*6|1|0.23|ENSG00000079134|chr18:224096-224097|-/T|frameshift_variant	44.116797842482775	0.37197099687881774	6				NaN	NaN	0	NaN	6285	3106	9391
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9394	26.552	NaN	17746	30	0	1532.9	0.106			+	30220	PSSAPPPLAA	10	75	454.2464555612878	906.4783581893756	2	454.24920654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PSSAPPPLAA_	REV__KRTAP10-9|p.C95Afs*?|1|0.23|ENSG00000221837|chr21:44627449-44627449|C/-|frameshift_variant	44.116797842482775	0.5112108506279902	6				NaN	NaN	0	NaN	6286	3106	9391
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9395	26.554	NaN	8199.9	30	0	4714.6	0.106	+			33653	RMWPPRALSL	10	77	621.8416606862232	1241.6687684392464	2	621.8439331054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_RM(Oxidation (M))WPPRALSL_	ENST00000444362.2_1_1:1336293-1336503:+|nuORF	47.657333605630114	0.47858658696240314	6				NaN	NaN	0	NaN	6287	3106	9391
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9396	26.556	NaN	9283.5	30	0	1453.2	0.106	+			43418	TGKISFKNL	9	61	336.5344378546052	NaN	0	336.5343322753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TGKISFKNL_	ENSG00000147400|ENST00000370277|CETN2;ENSG00000177143|ENST00000327228|CETN1;ENST00000493482.1_1_X:151996387-151997293:-|nuORF	24.20275056022122	0.35506675290109213	6				NaN	NaN	0	NaN	6288	3106	9391
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9397	26.557	NaN	5593.6	30	0	384.5	0.036			+	-1	KAKCPCSLM	9	80	527.2481757136709	1052.4817984941417	2	527.753173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),Oxidation (M)	_KAKC(Carbamidomethyl (C))PCSLM(Oxidation (M))_	REV__ENSG00000096996|ENST00000593993|IL12RB1;REV__IL12RB1|p.Y481Lfs*8|1|0.07|ENSG00000096996|chr19:18066583-18066584|-/A|frameshift_variant;REV__nc|ENSG00000096996|P42701-2|IL12RB1;REV__nc|ENSG00000096996|P42701-3|IL12RB1	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	6289	3106	9391
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9398	26.558	NaN	3760.7	30	0	310.18	0.143				-1	 	0	57	333.2293682255507	996.666275276852	3	333.2303771972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6290	3106	9391
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9416	26.597	NaN	34742	30	0	12336	0.214	+			38894	SSPCHIEM	8	77	480.6976088645899	959.3806647959798	2	480.6993103027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SSPC(Carbamidomethyl (C))HIEM_	ENSG00000265681|ENST00000580261|RPL17;ENST00000414070.1_1_1:109535017-109535455:+|nuORF;ENST00000446498.1_1_1:26781156-26781564:-|nuORF;ENST00000452862.1_1_3:197577273-197577471:-|nuORF;ENST00000498256.1_1_8:29489773-29490157:+|nuORF;nc|ENSG00000265681|P18621-2|RPL17;nc|ENSG00000265681|P18621-3|RPL17	82.30502934623384	0.30436709589983096	6				NaN	NaN	0	NaN	6305	3109	9415
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9417	26.6	NaN	9950.8	30	0	1145.1	0.106	+			37960	SPGFEIHLT	9	68	500.7575110902252	999.5004692472504	2	501.2666320800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SPGFEIHLT_	TMC7|p.R441H|1|0.4|ENSG00000170537|chr16:19040431-19040431|G/A|missense_variant	53.351449002276354	0.2690372970092375	6				NaN	NaN	0	NaN	6306	3109	9415
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9418	26.602	NaN	6523.4	30	0	651.78	0.106	+			46035	VAYQQILSQ	9	87	350.52564835033263	1048.5551156511979	3	350.5268859863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VAYQQILSQ_	ENSG00000074047|ENST00000361492|GLI2;ENST00000438299.5_1_2:121728002-121748192:+|nuORF;ENST00000452692.5_1_2:121728002-121748192:+|nuORF;GLI2|p.R1387Lfs*143|1|0.1|ENSG00000074047|chr2:120990074-120990074|G/-|frameshift_variant;nc|ENSG00000074047|P10070|GLI2	41.42661286455405	0.403525789677298	6				NaN	NaN	0	NaN	6307	3109	9415
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9419	26.604	NaN	10687	30	0	2039.9	0.106			+	42608	TATDVKKLR	9	75	516.3143521326054	1030.6141513320108	2	516.316162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TATDVKKLR_	REV__ENSG00000131018|ENST00000367255|SYNE1;REV__ENST00000367256.9_1_6:152443573-152639413:-|nuORF;REV__nc|ENSG00000131018|Q8NF91-2|SYNE1;REV__nc|ENSG00000131018|Q8NF91-4|SYNE1;REV__nc|ENSG00000131018|Q8NF91-8|SYNE1;REV__SYNE1|p.L8283Pfs*8|1|0.19|ENSG00000131018|chr6:152148173-152148174|-/G|frameshift_variant;REV__SYNE1|p.V8635Sfs*12|1|0.15|ENSG00000131018|chr6:152133375-152133375|T/-|frameshift_variant	66.96192283764107	0.15557981141143568	6				NaN	NaN	0	NaN	6308	3109	9415
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9420	26.606	NaN	17292	30	0	3120.1	0.106	+			10039	ESARQLQL	8	79	472.7605922051009	943.5066314770019	2	472.76214599609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ESARQLQL_	ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC	76.7741389293348	0.3504530765139327	6				NaN	NaN	0	NaN	6309	3109	9415
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9421	26.608	NaN	14027	30	0	1571.9	0.106	+			16892	HPIHQGITEL	10	77	572.8084245108073	1143.6022960884145	2	572.8096923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HPIHQGITEL_	ENSG00000149636|ENST00000373750|DSN1;nc|ENSG00000149636|Q9H410-2|DSN1;nc|ENSG00000149636|Q9H410-4|DSN1	104.42354056486148	0.06456012287859861	6				NaN	NaN	0	NaN	6310	3109	9415
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9422	26.609	NaN	9909	30	0	5711.1	0.03				-1	 	0	64	322.19264715823056	642.3707413832611	2	322.19366455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6311	3109	9415
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9440	26.647	NaN	34845	30	0	6275.1	0.214	+			25028	LLGVLGSLP	9	77	434.77884694358465	867.5431409539693	2	434.77978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LLGVLGSLP_	ENST00000211379.9_1_6:31619532-31620470:-|nuORF;ENST00000375964.10_1_6:31619532-31620470:-|nuORF	35.200714571348534	0.47427825964483533	6				NaN	NaN	0	NaN	6326	3112	9439
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9441	26.651	NaN	39626	30	0	5541.6	0.106	+			18539	ISLYINNPL	9	96	523.7974750692655	1045.5803972053309	2	523.7994384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ISLYINNPL_	ENSG00000100271|ENST00000266254|TTLL1;nc|ENSG00000100271|O95922-4|TTLL1;TTLL1|p.V179M|1|0.32|ENSG00000100271|chr22:43064293-43064293|C/T|missense_variant	73.97473282117947	0.12360187025703594	6				NaN	NaN	0	NaN	6327	3112	9439
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9442	26.653	NaN	11510	30	0	696.93	0.106			+	27385	MKKRRKEM	8	80	553.8179467565541	1105.621340579908	2	553.81982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MKKRRKEM_	REV__ZC3H14|p.K307Nfs*48|1|0.26|ENSG00000100722|chr14:88574746-88574746|A/-|frameshift_variant	52.936696900407355	0.5717071646657654	6				NaN	NaN	0	NaN	6328	3112	9439
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9443	26.655	NaN	35075	30	0	9283	0.106	+			41996	SVYGYGVQK	9	71	500.7575110902252	999.5004692472504	2	500.75830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVYGYGVQK_	ENSG00000107164|ENST00000319725|FUBP3;FUBP3|p.P395Lfs*27|2|0.27|ENSG00000107164|chr9:130630689-130630689|C/-|frameshift_variant	118.74307786436346	0.02196067127630568	6				NaN	NaN	0	NaN	6329	3112	9439
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9444	26.656	NaN	10925	30	0	692.05	0.106	+			51577	YYKSTSSAF	9	75	527.2481757136709	1052.4817984941417	2	527.248291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YYKSTSSAF_	ENSG00000197093|ENST00000360039|GAL3ST4;ENST00000423751.2_1_7:99757553-99764836:-|nuORF;GAL3ST4|p.F427Sfs*17|1|0.32|ENSG00000197093|chr7:100160111-100160111|G/-|frameshift_variant;nc|ENSG00000197093|Q96RP7-2|GAL3ST4	71.87747018426188	0.13267044672804276	6				NaN	NaN	0	NaN	6330	3112	9439
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9445	26.658	NaN	14289	30	0	1547.6	0.037			+	37127	SITNWPSINN	10	81	573.2828799941818	1144.5512070551636	2	573.2847290039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SITNWPSINN_	REV__RASEF|p.G379W|1|0.09|ENSG00000165105|chr9:83004565-83004565|C/A|missense_variant	42.86426827375447	0.522752283233888	6				NaN	NaN	0	NaN	6331	3112	9439
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9446	26.659	NaN	10513	30	0	1534.2	0.142				-1	QHDILQMIC	9	82	558.7627954257553	1115.5110379183104	2	558.7648315429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_QHDILQM(Oxidation (M))IC_	chr10:128113602-128116491|398|11.56|0.71|4.03|-|ENST00000368653|MKI67,MKI67;ENSG00000148773|ENST00000368654|MKI67;MKI67|p.L2374*|1|0.28|ENSG00000148773|chr10:128104719-128104719|A/-|frameshift_variant;MKI67|p.L783Hfs*49|1|0.05|ENSG00000148773|chr10:128110447-128110448|-/TG|frameshift_variant;MKI67|p.L783Yfs*49|1|0.05|ENSG00000148773|chr10:128110446-128110447|-/GT|frameshift_variant;MKI67|p.R3036Yfs*27|1|0.04|ENSG00000148773|chr10:128102735-128102736|-/AAAATAA|frameshift_variant;MKI67|p.S634R|1|0.36|ENSG00000148773|chr10:128112200-128112200|A/T|missense_variant;MKI67|p.T672Nfs*4|1|0.25|ENSG00000148773|chr10:128112000-128112001|-/T|frameshift_variant;nc|ENSG00000148773|P46013-2|MKI67	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	6332	3112	9439
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9464	26.698	NaN	35741	30	0	6366	0.214	+			24067	LEKAENQVL	9	92	522.2884439944658	1042.5623350557314	2	522.2903442382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LEKAENQVL_	ENSG00000185825|ENST00000345046|BCAP31;ENST00000563143.2_1_16:32882346-32883351:+|nuORF;nc|ENSG00000185825|P51572-2|BCAP31	134.7655990226056	0.012935733000282069	6				NaN	NaN	0	NaN	6347	3115	9463
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9465	26.702	NaN	11317	30	0	1221	0.106				-1	 	0	82	449.2724930509851	896.5304331687702	2	449.2736511230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6348	3115	9463
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9466	26.704	NaN	11456	30	0	920.85	0.106				-1	 	0	82	503.25039755497323	502.24312108837324	1	503.2532958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6349	3115	9463
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9467	26.706	NaN	6952.2	30	0	1358.1	0.106	+			46471	VETEIQRV	8	78	487.27058108918806	NaN	0	487.2688293457031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VETEIQRV_	AMOT|p.L850Cfs*59|1|0.13|ENSG00000126016|chrX:112779606-112779606|G/-|frameshift_variant;ENSG00000126016|ENST00000371959|AMOT;nc|ENSG00000126016|Q4VCS5-2|AMOT	56.72105179125745	1.7418937515398478	6				NaN	NaN	0	NaN	6350	3115	9463
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9468	26.707	NaN	11408	30	0	4366.3	0.106				-1	 	0	73	438.7309654016521	875.4473778701042	2	438.7320861816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6351	3115	9463
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9469	26.709	NaN	5154.1	30	0	548.07	0.036	+			51518	YVRTSGSSSQ	10	70	536.2574673438107	1070.5003817544214	2	536.2592163085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YVRTSGSSSQ_	ENSG00000175691|ENST00000314531|ZNF77	37.50817390946774	0.5721060100277453	6				NaN	NaN	0	NaN	6352	3115	9463
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9470	26.71	NaN	5825	30	0	325.47	0.139			+	17272	IAAKTFQK	8	63	453.77307299168103	905.5315930501621	2	453.7738037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IAAKTFQK_	REV__ENSG00000145491|ENST00000274134|ROPN1L;REV__ENST00000510520.5_1_5:10442060-10472024:+|nuORF;REV__ENST00000515762.5_1_5:10442078-10461472:+|nuORF	45.9519527083369	0.6193794311207887	6				NaN	NaN	0	NaN	6353	3115	9463
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9488	26.749	NaN	26048	30	0	3958.4	0.214	+			21543	KNSVGSESKHG	11	91	565.2839106771936	1128.553268421187	2	565.2858276367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KNSVGSESKHG_	ENSG00000170160|ENST00000399273|CCDC144A;ENST00000340196.8_1_17:20224590-20239407:+|nuORF;ENST00000399264.1_1_17:16593591-16608727:+|nuORF;ENST00000445752.5_1_17:18506915-18528649:-|nuORF;ENST00000450277.2_1_17:18523453-18528799:-|nuORF;nc|ENSG00000154898|Q8IYA2|CCDC144CP;nc|ENSG00000266302|A2RUR9-3|CCDC144A;nc|ENSG00000266302|A2RUR9|CCDC144A;nc|ENSG00000291074|Q6NUI1|CCDC144NL;nc|ENSG00000291090|Q3MJ40-2|CCDC144BP;nc|ENSG00000291090|Q3MJ40|CCDC144BP	80.45461616416974	0.1485828924062742	6				NaN	NaN	0	NaN	6368	3118	9487
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9489	26.753	NaN	16078	30	0	1843.5	0.106	+			35953	SEGPKVVSV	9	82	451.2529585556891	NaN	0	451.2529296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEGPKVVSV_	ENSG00000143373|ENST00000336715|ZNF687;nc|ENSG00000143373|Q8N1G0-2|ZNF687;ZNF687|p.A639Pfs*74|1|0.27|ENSG00000143373|chr1:151288202-151288202|G/-|frameshift_variant;ZNF687|p.H733Mfs*30|1|0.58|ENSG00000143373|chr1:151288603-151288603|C/-|frameshift_variant;ZNF687|p.P960Lfs*23|1|0.3|ENSG00000143373|chr1:151289915-151289915|G/-|frameshift_variant;ZNF687|p.R871Gfs*29|1|0.1|ENSG00000143373|chr1:151289512-151289512|A/-|frameshift_variant;ZNF687|p.R939Vfs*10|1|0.08|ENSG00000143373|chr1:151289852-151289852|C/-|frameshift_variant	72.87924865735499	0.09578366712754152	6				NaN	NaN	0	NaN	6369	3118	9487
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9490	26.755	NaN	11336	30	0	1826.4	0.106			+	30185	PSLAPGVAEQK	11	82	548.8038858149312	1095.5932186966622	2	548.8058471679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PSLAPGVAEQK_	REV__ENST00000571380.1_1_17:18939269-18950305:-|nuORF	51.19269402634007	0.4047928213175833	6				NaN	NaN	0	NaN	6370	3118	9487
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9491	26.757	NaN	7682.2	30	0	925.38	0.106	+			43897	TNGGHQRSK	9	76	492.75177648671985	983.4890000402397	2	492.753173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TNGGHQRSK_	TENM2|p.L1667Hfs*17|1|0.05|ENSG00000145934|chr5:168218890-168218891|-/ATCAGCGT|frameshift_variant	35.15202426646627	0.4747332964206883	6				NaN	NaN	0	NaN	6371	3118	9487
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9492	26.758	NaN	29164	30	0	10535	0.106	+			14534	GTDRTGFTFK	10	91	377.1927609217866	NaN	0	377.1927185058594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GTDRTGFTFK_	ENSG00000100297|ENST00000216122|MCM5	55.08391021199286	0.27346126051334796	6				NaN	NaN	0	NaN	6372	3118	9487
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9493	26.76	NaN	7248.6	30	0	1739.7	0.034	+			3813	ATAGNVLMH	9	69	457.22992877668634	912.4453046201727	2	457.2314147949219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATAGNVLMH_	ENSG00000157637|ENST00000374759|SLC38A10;ENST00000546352.1_1_17:79244758-79256003:-|nuORF;nc|ENSG00000157637|Q9HBR0-2|SLC38A10;nc|ENSG00000157637|Q9HBR0-3|SLC38A10	115.45897859103373	0.02394878348088707	6				NaN	NaN	0	NaN	6373	3118	9487
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9494	26.761	NaN	11645	30	0	741.21	0.141	+			12876	GEQYDQAKL	9	81	526.254903758987	1050.4952545847739	2	526.2567749023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GEQYDQAKL_	CNOT1|p.Q904Sfs*9|4|0.29|ENSG00000125107|chr16:58555436-58555436|A/-|frameshift_variant;ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1;nc|ENSG00000125107|A5YKK6-4|CNOT1	66.96192283764107	0.15557981141143568	6				NaN	NaN	0	NaN	6374	3118	9487
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9512	26.798	NaN	61384	30	0	38070	0.214	+			9426	EKKAWTPSR	9	84	551.8038207670089	1101.5930886008177	2	551.8057861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EKKAWTPSR_	ENSG00000088899|ENST00000337576|LZTS3;nc|ENSG00000088899|O60299-2|LZTS3	79.71258880314673	0.09879134589249085	6				NaN	NaN	0	NaN	6389	3121	9511
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9513	26.802	NaN	23888	30	0	1642	0.106				-1	 	0	106	483.764846981799	965.515141030398	2	483.7659912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6390	3121	9511
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9514	26.804	NaN	21156	30	0	2628	0.106	+			8268	EAGSYEMTNQ	10	95	573.2242314174521	1144.433909901704	2	573.22705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_EAGSYEM(Oxidation (M))TNQ_	ENSG00000137770|ENST00000260327|CTDSPL2;nc|ENSG00000137770|Q05D32-2|CTDSPL2	49.44154591367651	0.46214596422418036	6				NaN	NaN	0	NaN	6391	3121	9511
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9515	26.806	NaN	22212	30	0	6941	0.106	+			5748	AVGDTPIMK	9	84	466.2486799560619	930.4828069789238	2	466.2493591308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVGDTPIMK_	ENSG00000145782|ENST00000509910|ATG12;ENST00000508464.5_1_5:115169283-115173453:-|nuORF;ENST00000578331.1_1_17:71064194-71064335:-|nuORF	87.69643885390035	0.07135982304947239	6				NaN	NaN	0	NaN	6392	3121	9511
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9516	26.808	NaN	14677	30	0	1292.9	0.106	+			29325	NYQNVVHKL	9	85	557.8020659079174	1113.5895788826347	2	557.8043212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NYQNVVHKL_	ENSG00000146463|ENST00000314607|ZMYM4;nc|ENSG00000146463|Q5VZL5-2|ZMYM4;nc|ENSG00000146463|Q5VZL5-3|ZMYM4;nc|ENSG00000146463|Q5VZL5-4|ZMYM4;ZMYM4|p.A956Sfs*68|1|0.38|ENSG00000146463|chr1:35393690-35393691|-/A|frameshift_variant;ZMYM4|p.D1229Ifs*2|1|0.12|ENSG00000146463|chr1:35405175-35405175|G/-|frameshift_variant;ZMYM4|p.N1222Kfs*15|1|0.25|ENSG00000146463|chr1:35405154-35405155|-/A|frameshift_variant;ZMYM4|p.Y806Ifs*12|1|0.16|ENSG00000146463|chr1:35389058-35389059|-/A|frameshift_variant	148.98678547993487	0.0071052929883181565	6				NaN	NaN	0	NaN	6393	3121	9511
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9517	26.81	NaN	9933.2	30	0	1340.1	0.106	+			18940	IVNNENKDVL	10	85	579.3105596001592	1156.6065662671183	2	579.3123168945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IVNNENKDVL_	ENSG00000167004|ENST00000300289|PDIA3;ENST00000434494.5_1_15:44038867-44063413:+|nuORF;ENST00000471856.1_1_1:146649692-146651075:+|nuORF	85.86182877749512	0.1547657473298402	6				NaN	NaN	0	NaN	6394	3121	9511
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9518	26.811	NaN	9229.4	30	0	2660.2	0.036			+	-1	LFSVAMLFL	9	72	352.86506405947966	1055.573362778639	3	352.86602783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_LFSVAM(Oxidation (M))LFL_	REV__ENSG00000121274|ENST00000561678|TENT4B;REV__ENST00000562717.1_1_16:50188117-50258568:+|nuORF;REV__nc|ENSG00000121274|Q8NDF8-2|TENT4B;REV__nc|ENSG00000121274|Q8NDF8-3|TENT4B;REV__nc|ENSG00000121274|Q8NDF8-4|TENT4B;REV__nc|ENSG00000121274|Q8NDF8-5|TENT4B;REV__nc|ENSG00000121274|Q8NDF8|TENT4B	35.61828744233558	0.47037581924408073	6				NaN	NaN	0	NaN	6395	3121	9511
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9536	26.846	NaN	361460	30	0	59696	0.093			+	11802	FSSACPQPRGA	11	90	560.7638430920329	1119.5131332508656	2	560.7659301757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FSSACPQPRGA_	REV__ENST00000565652.1_1_15:75660495-75660924:-|nuORF	54.722347961057174	0.3705654281804646	6				NaN	NaN	0	NaN	6410	3124	9535
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9537	26.847	NaN	163120	30	0	83421	0.106			+	-1	SFVHAGREAM	10	87	374.17833287529584	1119.5131692260875	3	374.17974853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_SFVHAGREAM(Oxidation (M))_	REV__ENSG00000064313|ENST00000378164|TAF2;REV__TAF2|p.A1003Lfs*3|1|0.21|ENSG00000064313|chr8:119746807-119746807|T/-|frameshift_variant;REV__TAF2|p.I604Sfs*3|1|0.11|ENSG00000064313|chr8:119785250-119785250|T/-|frameshift_variant	38.753607047826485	0.5606299674732264	6				NaN	NaN	0	NaN	6411	3124	9535
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9538	26.849	NaN	57091	30	0	12442	0.106	+			10869	FAVGWGPIPW	10	101	565.2940254546353	1128.5734979760705	2	565.2959594726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FAVGWGPIPW_	ENSG00000136856|ENST00000373371|SLC2A8	65.89745868150666	0.31220354485832413	6				NaN	NaN	0	NaN	6412	3124	9535
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9539	26.851	NaN	54213	30	0	26068	0.106				-1	 	0	72	431.25435721352056	860.4941614938411	2	431.25555419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6413	3124	9535
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9540	26.853	NaN	21995	30	0	2326.1	0.106			+	31510	QLFGSPLFSR	10	91	576.3141294887411	1150.613706044282	2	576.316162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QLFGSPLFSR_	REV__ZNF133|p.C66Mfs*37|1|0.28|ENSG00000125846|chr20:18306363-18306364|-/A|frameshift_variant	65.15724298150197	0.31893571707528906	6				NaN	NaN	0	NaN	6414	3124	9535
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9541	26.855	NaN	21946	30	0	7714.3	0.106			+	29019	NSRFKETAEI	10	77	597.810137229231	1193.605721525262	2	597.8133544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NSRFKETAEI_	REV__ENSG00000099331|ENST00000682292|MYO9B;REV__ENST00000593533.1_1_19:17308986-17317625:+|nuORF;REV__MYO9B|p.A2017Pfs*36|1|0.42|ENSG00000099331|chr19:17211760-17211760|G/-|frameshift_variant;REV__MYO9B|p.R2060Gfs*68|2|0.32|ENSG00000099331|chr19:17212009-17212009|C/-|frameshift_variant;REV__nc|ENSG00000099331|Q13459-2|MYO9B	60.1669710687717	0.3643216362415131	6				NaN	NaN	0	NaN	6415	3124	9535
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9542	26.857	NaN	23143	30	0	7470.1	0.106	+			18408	IRYSVWEEI	9	66	398.87632453429376	1193.6071442030814	3	398.8778991699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IRYSVWEEI_	PCDHGA2|p.R36W|1|0.27|ENSG00000081853|chr5:141339077-141339077|C/T|missense_variant	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	6416	3124	9535
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9543	26.858	NaN	12384	30	0	1680.8	0.034	+			2279	ALYPEEIL	8	79	474.2584444737273	946.5023360142546	2	474.2603759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_ALYPEEIL_	ENSG00000143387|ENST00000271651|CTSK	76.84663266511073	0.3498490246073164	6				NaN	NaN	0	NaN	6417	3124	9535
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9561	26.895	NaN	38483	30	0	11527	0.214				-1	 	0	86	548.2644143770821	1094.514275820964	2	548.2662963867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6432	3127	9560
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9562	26.899	NaN	15435	30	0	2721.8	0.106	+			22321	KTFKQRRT	8	91	532.819683424866	1063.6248139165318	2	532.8213500976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KTFKQRRT_	ENSG00000140941|ENST00000268607|MAP1LC3B;ENSG00000258102|ENST00000556529|MAP1LC3B2;ENST00000564638.1_1_16:87426033-87432506:+|nuORF	82.30502934623384	0.30436709589983096	6				NaN	NaN	0	NaN	6433	3127	9560
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9563	26.901	NaN	11333	30	0	1960.5	0.106	+			26071	LSLSEYRRQR	10	85	436.57699962196034	1306.709169466081	3	436.5781555175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSLSEYRRQR_	PPRC1|p.R759Q|1|0.33|ENSG00000148840|chr10:102140784-102140784|G/A|missense_variant	31.634271133179894	0.6214930414500597	6				NaN	NaN	0	NaN	6434	3127	9560
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9564	26.903	NaN	16270	30	0	1441.9	0.106	+			40696	SVAVLRGIQK	10	92	535.8366302140341	1069.6587074948682	2	535.8380737304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVAVLRGIQK_	ENSG00000058600|ENST00000299853|POLR3E;ENST00000564061.5_1_16:22308800-22337695:+|nuORF;ENST00000569787.1_1_16:22328322-22336592:+|nuORF;nc|ENSG00000058600|Q9NVU0-2|POLR3E;nc|ENSG00000058600|Q9NVU0-3|POLR3E;nc|ENSG00000058600|Q9NVU0-4|POLR3E;nc|ENSG00000058600|Q9NVU0-5|POLR3E;POLR3E|p.G595Afs*51|1|0.33|ENSG00000058600|chr16:22326189-22326189|C/-|frameshift_variant;POLR3E|p.P340Lfs*35|1|0.38|ENSG00000058600|chr16:22322880-22322880|C/-|frameshift_variant	96.0336014099291	0.09653029772959643	6				NaN	NaN	0	NaN	6435	3127	9560
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9565	26.905	NaN	14262	30	0	2439.6	0.106				-1	VNLTESCRSCS	11	66	419.18603900869743	1254.5362876262923	3	419.1874084472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_VNLTESC(Carbamidomethyl (C))RSCS_	KAT2B|p.S131N|1|0.38|ENSG00000114166|chr3:20072421-20072421|G/A|missense_variant	36.527901853580055	0.6054519527965578	6				NaN	NaN	0	NaN	6436	3127	9560
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9566	26.906	NaN	6932.1	30	0	2387.4	0.034				-1	VALQGCMD	8	72	455.19209273867136	908.3696325441427	2	455.1936340332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),Oxidation (M)	_VALQGC(Carbamidomethyl (C))M(Oxidation (M))D_	ENSG00000072778|ENST00000356839|ACADVL;ENST00000583850.5_1_17:7127146-7127844:+|nuORF;nc|ENSG00000072778|P49748-2|ACADVL;nc|ENSG00000072778|P49748-3|ACADVL	38.80614096846853	0.6637206697844082	6				NaN	NaN	0	NaN	6437	3127	9560
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9567	26.907	NaN	3781.3	30	0	224.02	0.144	+			36035	SEIQEEKPEPV	11	80	642.8174032142267	1283.6202534952533	2	642.8194580078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SEIQEEKPEPV_	ENSG00000145907|ENST00000356245|G3BP1	99.78786539795823	0.061125669442822994	6				NaN	NaN	0	NaN	6438	3127	9560
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9585	26.945	NaN	20572	30	0	3285.2	0.214			+	32897	RDRDQACRQ	9	82	574.271277338827	1146.5280017444538	2	574.2734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RDRDQACRQ_	REV__ENST00000417753.5_1_3:48557182-48594149:-|nuORF	59.93077597824379	0.21419174904018318	6				NaN	NaN	0	NaN	6453	3130	9584
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9586	26.949	NaN	13085	30	0	1157.9	0.106	+			674	AEAITSQKL	9	84	480.7704342751111	959.5263156170222	2	480.77154541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEAITSQKL_	ENSG00000203697|ENST00000366872|CAPN8	106.68306549817024	0.032382560583716295	6				NaN	NaN	0	NaN	6454	3130	9584
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9587	26.951	NaN	11390	30	0	4760	0.106	+			32886	RDLAGHCYYAL	11	71	641.3048114571985	1280.595069981197	2	641.3065795898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RDLAGHCYYAL_	ENSG00000215182|ENST00000621226|MUC5AC;ENST00000358378.6_11:1212786-1216326:+|nuORF	39.252832667884924	0.5681665794958463	6				NaN	NaN	0	NaN	6455	3130	9584
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9588	26.953	NaN	12761	30	0	1599.9	0.106			+	49461	VVWLCQHK	8	74	506.77303966496635	1011.5315263967327	2	506.7745666503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VVWLCQHK_	REV__ENST00000393295.7_1_3:128879825-128879960:-|nuORF	37.028477286268924	0.6747514403204248	6				NaN	NaN	0	NaN	6456	3130	9584
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9589	26.955	NaN	20299	30	0	1353.3	0.106				-1	 	0	86	543.2995116207743	1084.5844703083485	2	543.3013916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6457	3130	9584
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9590	26.956	NaN	9845.4	30	0	1547.5	0.035	+			3210	ASKRRSRF	8	66	336.5344378546052	NaN	0	336.5342102050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASKRRSRF_	ENSG00000156299|ENST00000541036|TIAM1;ENST00000469412.5_1_21:32585686-32624433:-|nuORF;nc|ENSG00000156299|Q13009-2|TIAM1	25.450171626174864	1.7418937515398478	6				NaN	NaN	0	NaN	6458	3130	9584
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9591	26.957	NaN	11088	30	0	1834.6	0.14				-1	 	0	79	502.2548903604776	1002.4952277877552	2	502.2563781738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6459	3130	9584
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9609	26.995	NaN	147490	30	0	32157	0.108				-1	 	0	61	322.19264715823056	642.3707413832611	2	322.19354248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6474	3133	9608
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9610	26.997	NaN	163120	30	0	67658	0.106	+			14986	GTMTGMLYK	9	79	509.2388824419815	1016.463211950763	2	509.2407531738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_GTMTGM(Oxidation (M))LYK_	ENSG00000178440|ENST00000651763|TIMM23B-AGAP6;ENSG00000204152|ENST00000651259|TIMM23B;ENSG00000265354|ENST00000580018|TIMM23;nc|ENSG00000204152|Q5SRD1-2|TIMM23B	131.03138772384656	0.014687601201650916	6				NaN	NaN	0	NaN	6475	3133	9608
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9611	26.999	NaN	15817	30	0	2063.9	0.106	+			23101	KVVEREEAVP	10	84	578.3224852231444	1154.6304175130888	2	578.3243408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KVVEREEAVP_	ENSG00000079819|ENST00000337057|EPB41L2	99.01295224348159	0.08062808246117298	6				NaN	NaN	0	NaN	6476	3133	9608
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9612	27.001	NaN	32843	30	0	5161.2	0.106	+			14332	GSYSLEEPK	9	102	505.24391750608027	1008.4732820789606	2	505.24603271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GSYSLEEPK_	ENSG00000115884|ENST00000254351|SDC1;SDC1|p.E283K|1|0.33|ENSG00000115884|chr2:20202852-20202852|C/T|missense_variant	104.0567914643314	0.03506238181059741	6				NaN	NaN	0	NaN	6477	3133	9608
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9613	27.003	NaN	27394	30	0	3794.7	0.106	+			13824	GQQRQRGGAA	10	85	514.7701954903077	1027.5258380474154	2	514.7722778320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GQQRQRGGAA_	ENST00000372469.5_1_9:132427956-132481510:+|nuORF	49.44154591367651	0.46214596422418036	6				NaN	NaN	0	NaN	6478	3133	9608
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9614	27.005	NaN	23485	30	0	1780.4	0.106	+			4976	ATQVAVSVPK	10	90	500.29440898155053	998.5742650299011	2	500.2952880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATQVAVSVPK_	EIF4G1|p.P1229Qfs*2|1|0.18|ENSG00000114867|chr3:184327606-184327606|C/-|frameshift_variant;ENSG00000114867|ENST00000346169|EIF4G1;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1	100.81924332030881	0.07526389463299563	6				NaN	NaN	0	NaN	6479	3133	9608
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9615	27.006	NaN	7262.5	30	0	742.69	0.034			+	-1	SELTMKTT	8	81	463.731555565369	NaN	0	463.73211669921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_SELTM(Oxidation (M))KTT_	REV__tr|U7T6S6|U7T6S6_FUSNUHMAdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00153PE=4SV=1	40.5726180659479	1.7418937515398478	6				NaN	NaN	0	NaN	6480	3133	9608
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9616	27.007	NaN	15416	30	0	1424.6	0.14	+			44447	TSMSKMFVK	9	92	529.770740793228	1057.526928653256	2	529.7725219726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_TSMSKMFVK_	ATP2A2|p.I1027Cfs*4|1|0.37|ENSG00000174437|chr12:110346394-110346395|-/TGTGCTGCTCATAATGCCCCTGG|frameshift_variant;ENSG00000174437|ENST00000539276|ATP2A2;nc|ENSG00000174437|P16615-2|ATP2A2;nc|ENSG00000174437|P16615-3|ATP2A2;nc|ENSG00000174437|P16615-4|ATP2A2;nc|ENSG00000174437|P16615-5|ATP2A2	101.25262130126117	0.03792372629710479	6				NaN	NaN	0	NaN	6481	3133	9608
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9634	27.046	NaN	46283	30	0	15677	0.214				-1	 	0	94	464.77520037613465	927.5358478190693	2	464.7764587402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6496	3136	9633
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9635	27.05	NaN	43214	30	0	7822.2	0.106			+	-1	FLMGCKGRF	9	102	377.8525931750751	1130.5359501254254	3	377.8537902832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_FLM(Oxidation (M))GC(Carbamidomethyl (C))KGRF_	REV__ENSG00000039987|ENST00000553030|BEST2	37.15910966729921	0.4535818937225704	6				NaN	NaN	0	NaN	6497	3136	9633
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9636	27.052	NaN	34154	30	0	12674	0.106				-1	 	0	105	362.8792259384063	1085.615848415419	3	362.8803405761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6498	3136	9633
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9637	27.054	NaN	26363	30	0	1737.6	0.106	+			51226	YPVEHPDKF	9	93	566.2763879553553	1130.5382229775105	2	566.2788696289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YPVEHPDKF_	ENSG00000165280|ENST00000358901|VCP;ENST00000493886.5_1_9:35057116-35062147:-|nuORF	85.86182877749512	0.07653218437724067	6				NaN	NaN	0	NaN	6499	3136	9633
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9638	27.056	NaN	14092	30	0	4264.2	0.106				-1	VVGAGLVKLMF	11	83	383.89469839923174	1148.6622657978953	3	383.8960876464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_VVGAGLVKLM(Oxidation (M))F_	ENST00000544778.6_1_17:65900857-65900929:+|nuORF	38.753607047826485	0.5749975102143227	6				NaN	NaN	0	NaN	6500	3136	9633
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9639	27.057	NaN	80762	30	0	7621.9	0.036	+			36579	SFSTVHEKF	9	106	541.2677004957537	1080.5208480583074	2	541.2693481445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SFSTVHEKF_	ENSG00000134987|ENST00000513710|WDR36;ENST00000505303.5_1_5:110428043-110447004:+|nuORF;nc|ENSG00000134987|Q8NI36|WDR36	114.85826248499774	0.024312442104607014	6				NaN	NaN	0	NaN	6501	3136	9633
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9640	27.058	NaN	10966	30	0	956.25	0.145			+	51500	YVNYGELKI	9	99	366.86606248839996	1097.5763580654	3	366.8669738769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YVNYGELKI_	REV__ENSG00000188107|ENST00000503581|EYS;REV__nc|ENSG00000188107|Q5T1H1|EYS	34.172542307311794	0.4838870758800184	6				NaN	NaN	0	NaN	6502	3136	9633
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9658	27.098	NaN	148690	30	0	74145	0.084				-1	 	0	81	529.8067489817375	1057.598945030275	2	529.8082275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6517	3139	9657
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9659	27.099	NaN	90478	30	0	30134	0.067			+	37828	SMSTVANRSI	10	62	361.1807201250259	1080.5203309752778	3	361.1819152832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_SM(Oxidation (M))STVANRSI_	REV__ENSG00000122591|ENST00000432176|HYCC1;REV__ENST00000498833.1_1_7:22985770-23000907:-|nuORF;REV__nc|ENSG00000122591|Q9BYI3-3|HYCC1	43.650786325866115	0.5155049133366767	6				NaN	NaN	0	NaN	6518	3139	9657
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9660	27.1	NaN	37140	30	0	2913.8	0.106			+	24631	LGSNRRPLQ	9	75	520.8012378915771	1039.587922849954	2	520.8031005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LGSNRRPLQ_	REV__ENST00000528672.1_1_11:35223289-35229672:+|nuORF	79.45101966838831	0.09992237243120712	6				NaN	NaN	0	NaN	6519	3139	9657
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9661	27.102	NaN	13368	30	0	1264.6	0.106	+			41914	SVVGNFQEK	9	82	504.26079862677784	NaN	0	504.2611999511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVVGNFQEK_	ENSG00000180061|ENST00000326652|TMEM150B	80.91624569148213	0.06824414073816605	6				NaN	NaN	0	NaN	6520	3139	9657
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9662	27.104	NaN	39794	30	0	16639	0.106			+	-1	STIMKVDEDT	10	91	385.5143427013552	1153.5211987042655	3	385.51580810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_STIM(Oxidation (M))KVDEDT_	REV__ENSG00000073111|ENST00000265056|MCM2;REV__ENST00000474964.5_1_3:127323572-127340613:+|nuORF;REV__ENST00000477668.5_1_3:127323572-127337961:+|nuORF	46.45678178249821	0.4896490706773647	6				NaN	NaN	0	NaN	6521	3139	9657
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9663	27.106	NaN	28220	30	0	6514.5	0.106	+			49984	WALLCLGLL	9	76	353.54014950098383	1057.5986191031516	3	353.541259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_WALLC(Carbamidomethyl (C))LGLL_	ENSG00000186998|ENST00000334018|EMID1;nc|ENSG00000186998|Q96A84-2|EMID1;nc|ENSG00000186998|Q96A84|EMID1	45.9519527083369	0.35044536499095585	6				NaN	NaN	0	NaN	6522	3139	9657
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9664	27.108	NaN	11792	30	0	2562.6	0.106			+	33195	REWWIQRI	8	86	593.828489369874	1185.6424258065479	2	593.8303833007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_REWWIQRI_	REV__ENSG00000198793|ENST00000361445|MTOR;REV__ENST00000495435.1_1_1:11193031-11204809:-|nuORF	104.0567914643314	0.248440647781298	6				NaN	NaN	0	NaN	6523	3139	9657
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9665	27.109	NaN	11960	30	0	1710.2	0.038	+			8969	EFLERRERA	9	84	603.3232819909962	1204.6320110487923	2	603.324951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_EFLERRERA_	ENST00000513169.1_1_5:176738513-176738831:-|nuORF	60.97194046774394	0.20551255781574032	6				NaN	NaN	0	NaN	6524	3139	9657
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9683	27.147	NaN	64175	30	0	8994.9	0.214			+	34111	RSRLREGA	8	87	472.7726785629334	943.5308041926668	2	472.7738342285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RSRLREGA_	REV__ENSG00000102900|ENST00000308159|NUP93;REV__NUP93|p.F699Lfs*19|1|0.34|ENSG00000102900|chr16:56839025-56839025|T/-|frameshift_variant	79.45101966838831	0.3281480470254892	6				NaN	NaN	0	NaN	6539	3142	9682
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9684	27.151	NaN	28387	30	0	3449	0.106			+	9754	ENFSINFK	8	86	499.750682352997	997.486811772794	2	499.752197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ENFSINFK_	REV__tr|U7STR4|U7STR4_FUSNUABCtransporterpermeaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01158PE=4SV=1	64.20726635412375	0.4601301477144759	6				NaN	NaN	0	NaN	6540	3142	9682
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9685	27.153	NaN	25581	30	0	11159	0.106	+			20854	KILRDWMYK	9	85	626.8463941417062	1251.6782353502124	2	626.8483276367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KILRDWMYK_	ENSG00000153779|ENST00000283891|TGIF2LX;ENSG00000176679|ENST00000321217|TGIF2LY	76.7741389293348	0.11149722112137898	6				NaN	NaN	0	NaN	6541	3142	9682
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9686	27.155	NaN	51365	30	0	28275	0.106			+	5511	AVAELCSQLKR	11	100	425.56777060064553	1273.6814824021367	3	425.5688171386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_AVAELC(Carbamidomethyl (C))SQLKR_	REV__ENSG00000130382|ENST00000252674|MLLT1	50.033510581677724	0.4206539900604183	6				NaN	NaN	0	NaN	6542	3142	9682
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9687	27.157	NaN	22022	30	0	6731.6	0.106				-1	 	0	73	469.2046866290115	936.3948203248231	2	469.20587158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6543	3142	9682
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9688	27.158	NaN	14025	30	0	4537.2	0.034			+	20513	KFIDATVQ	8	68	461.2557194714351	920.4968860096702	2	461.25701904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KFIDATVQ_	REV__ENST00000575955.1_1_17:4120189-4167236:-|nuORF	93.19546047674547	0.2677966331495483	6				NaN	NaN	0	NaN	6544	3142	9682
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9689	27.159	NaN	9169.3	30	0	1960.3	0.14	+			38742	SSLPGVFKK	9	75	481.78551278536105	961.5564726375221	2	481.78680419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSLPGVFKK_	ENSG00000122707|ENST00000377966|RECK;ENST00000475774.5_1_9:36036951-36066822:+|nuORF;ENST00000479053.1_1_9:36036974-36085209:+|nuORF;RECK|p.K442Nfs*27|1|0.1|ENSG00000122707|chr9:36102116-36102116|A/-|frameshift_variant;RECK|p.N685Tfs*12|2|0.31|ENSG00000122707|chr9:36112464-36112464|A/-|frameshift_variant	71.87747018426188	0.13267044672804276	6				NaN	NaN	0	NaN	6545	3142	9682
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9707	27.197	NaN	29572	30	0	3931.1	0.214			+	23587	LALVSDYMK	9	89	528.2760007634753	1054.5374485937505	2	528.2779541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LALVSDYM(Oxidation (M))K_	REV__ENSG00000181885|ENST00000360325|CLDN7;REV__nc|ENSG00000181885|O95471-2|CLDN7	66.42927471994793	0.16001998865088202	6				NaN	NaN	0	NaN	6560	3145	9706
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9708	27.201	NaN	26995	30	0	3209.4	0.106				-1	HPHVELMNQ	9	96	560.7638430920329	1119.5131332508656	2	560.7662353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_HPHVELM(Oxidation (M))NQ_	ENST00000471595.5_1_3:136053161-136053266:+|nuORF	51.33545320467046	0.2872990594074956	6				NaN	NaN	0	NaN	6561	3145	9706
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9709	27.203	NaN	28974	30	0	1598.9	0.106			+	-1	LLMDALIPLQ	10	84	571.8274035772833	1141.6402542213666	2	571.8294067382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_LLM(Oxidation (M))DALIPLQ_	REV__ENSG00000141506|ENST00000447110|PIK3R5;REV__ENST00000578515.5_1_17:8785060-8814811:-|nuORF;REV__nc|ENSG00000141506|Q8WYR1-2|PIK3R5	93.19546047674547	0.11277922692270353	6				NaN	NaN	0	NaN	6562	3145	9706
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9710	27.205	NaN	9285.7	30	0	1116.5	0.106	+			8426	EAQRWAVLV	9	81	536.2997672578997	1070.5849815825993	2	536.8046264648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EAQRWAVLV_	ENSG00000179526|ENST00000398712|SHARPIN;nc|ENSG00000179526|Q9H0F6-2|SHARPIN	51.33545320467046	0.2872990594074956	6				NaN	NaN	0	NaN	6563	3145	9706
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9711	27.207	NaN	7042.9	30	0	938.44	0.106				-1	 	0	82	550.7987549429848	1099.5829569527696	2	550.8008422851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6564	3145	9706
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9712	27.208	NaN	10927	30	0	3187.8	0.037			+	7265	DALVMLDTVL	10	88	363.86810360781124	1088.5824814236337	3	363.869384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DALVMLDTVL_	REV__ENSG00000136449|ENST00000323776|MYCBPAP;REV__nc|ENSG00000136449|Q8TBZ2|MYCBPAP	44.377184641726394	0.5088115166961078	6				NaN	NaN	0	NaN	6565	3145	9706
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9713	27.209	NaN	5136	30	0	780.94	0.141			+	24690	LHARQRFAQ	9	73	563.8148321190018	1125.6151113048036	2	563.8165893554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LHARQRFAQ_	REV__ENSG00000142065|ENST00000270001|ZFP14	37.81151784470057	0.4459294069877048	6				NaN	NaN	0	NaN	6566	3145	9706
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9731	27.248	NaN	30324	30	0	6047.1	0.214	+			40569	SVAECQLMK	9	92	533.2558954885533	1064.4972380439065	2	533.2573852539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SVAEC(Carbamidomethyl (C))QLMK_	ENSG00000105221|ENST00000392038|AKT2;ENST00000391844.8_1_19:40739781-40791100:-|nuORF;ENST00000537834.5_1_19:40745726-40771198:-|nuORF;nc|ENSG00000105221|P31751-2|AKT2	176.08678752253132	0.0017279326439731339	6				NaN	NaN	0	NaN	6581	3148	9730
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9732	27.252	NaN	33232	30	0	2779.1	0.106			+	19396	KANKRSVSSK	10	97	552.828220240095	1103.64188754699	2	552.8301391601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KANKRSVSSK_	REV__CDH5|p.T612Sfs*143|1|0.11|ENSG00000179776|chr16:66401013-66401014|-/G|frameshift_variant;REV__CDH5|p.Y725Lfs*30|1|0.34|ENSG00000179776|chr16:66402979-66402980|-/C|frameshift_variant;REV__ENSG00000179776|ENST00000341529|CDH5;REV__nc|ENSG00000179776|P33151-2|CDH5	99.01295224348159	0.08062808246117298	6				NaN	NaN	0	NaN	6582	3148	9730
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9733	27.254	NaN	19897	30	0	4013.9	0.106	+			20402	KETFAFQV	8	81	485.2559162971262	968.4972796610524	2	485.25714111328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KETFAFQV_	SYT16|p.V578A|1|0.23|ENSG00000139973|chr14:62100502-62100502|T/C|missense_variant	67.49366992349736	0.4277823096851425	6				NaN	NaN	0	NaN	6583	3148	9730
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9734	27.256	NaN	11716	30	0	1809.7	0.106				-1	 	0	74	454.23218911706533	453.22491265046534	1	454.2311096191406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6584	3148	9730
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9735	27.258	NaN	21942	30	0	3771.8	0.106	+			12270	GAVRTRGRPL	10	103	361.5560365417284	1081.6462802253852	3	361.5571594238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GAVRTRGRPL_	ENST00000564063.1_1_1:108742589-108743207:+|nuORF	44.377184641726394	0.5088115166961078	6				NaN	NaN	0	NaN	6585	3148	9730
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9736	27.26	NaN	14194	30	0	2513.3	0.036			+	-1	EVIEDGCRL	9	87	545.7623099753731	1089.5100670175461	2	545.7640380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_EVIEDGC(Carbamidomethyl (C))RL_	REV__ENSG00000172349|ENST00000683961|IL16;REV__IL16|p.L969Pfs*8|1|0.1|ENSG00000172349|chr15:81300226-81300227|-/C|frameshift_variant;REV__IL16|p.N620Rfs*67|1|0.33|ENSG00000172349|chr15:81292982-81292983|-/AG|frameshift_variant;REV__nc|ENSG00000172349|Q14005-2|IL16	47.657333605630114	0.33044192980041115	6				NaN	NaN	0	NaN	6586	3148	9730
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9737	27.26	NaN	8241.5	30	0	666.83	0.14			+	11560	FPLKRKMS	8	72	503.7978391195717	1005.5811253059434	2	503.8002624511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FPLKRKMS_	REV__ANKRD12|p.D1018Rfs*2|1|0.34|ENSG00000101745|chr18:9256313-9256314|-/A|frameshift_variant;REV__ANKRD12|p.D530Kfs*23|1|0.42|ENSG00000101745|chr18:9254849-9254850|-/AAGAT|frameshift_variant;REV__ANKRD12|p.E54D|1|0.25|ENSG00000101745|chr18:9195625-9195625|G/T|missense_variant;REV__ANKRD12|p.I1846*|1|0.43|ENSG00000101745|chr18:9258797-9258797|A/-|frameshift_variant;REV__ANKRD12|p.I94Nfs*25|1|0.08|ENSG00000101745|chr18:9204519-9204520|-/A|frameshift_variant;REV__ANKRD12|p.K652Nfs*4|1|0.09|ENSG00000101745|chr18:9255217-9255217|A/-|frameshift_variant;REV__ANKRD12|p.K983Nfs*4|1|0.36|ENSG00000101745|chr18:9256209-9256209|A/-|frameshift_variant;REV__ANKRD12|p.L711Kfs*5|1|0.41|ENSG00000101745|chr18:9255395-9255396|TT/-|frameshift_variant;REV__ANKRD12|p.N1526Kfs*7|2|0.18|ENSG00000101745|chr18:9257837-9257838|-/A|frameshift_variant;REV__ANKRD12|p.S984Ifs*7|1|0.2|ENSG00000101745|chr18:9256208-9256209|-/A|frameshift_variant;REV__ENSG00000101745|ENST00000262126|ANKRD12;REV__ENST00000540578.6_1_18:9182415-9235682:+|nuORF;REV__nc|ENSG00000101745|Q6UB98-2|ANKRD12	50.0245360154114	0.5941082100236891	6				NaN	NaN	0	NaN	6587	3148	9730
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9755	27.299	NaN	20719	30	0	2806.6	0.214			+	24895	LKLRDMWI	8	90	537.8101183155848	1073.6056836979694	2	537.8119506835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LKLRDMWI_	REV__tr|U7SM96|U7SM96_FUSNUProteintranslocasesubunitSecAOS=FusobacteriumnucleatumCTI-5OX=1316586GN=secAPE=3SV=1	71.29570347882199	0.39610197767395533	6				NaN	NaN	0	NaN	6602	3151	9754
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9756	27.303	NaN	9634.8	30	0	2279.4	0.106				-1	 	0	66	438.26225417570583	874.5099554182117	2	438.2633972167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6603	3151	9754
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9757	27.305	NaN	14278	30	0	1211.7	0.106	+			27648	MPRVQTQQY	9	86	575.785535889844	1149.556518846488	2	575.7879638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MPRVQTQQY_	ENSG00000138674|ENST00000395310|SEC31A;nc|ENSG00000138674|O94979-10|SEC31A;nc|ENSG00000138674|O94979-2|SEC31A;nc|ENSG00000138674|O94979-3|SEC31A;nc|ENSG00000138674|O94979-4|SEC31A;nc|ENSG00000138674|O94979-6|SEC31A;nc|ENSG00000138674|O94979-7|SEC31A;nc|ENSG00000138674|O94979-8|SEC31A;nc|ENSG00000138674|O94979-9|SEC31A;SEC31A|p.P1058Qfs*62|1|0.4|ENSG00000138674|chr4:82827487-82827487|G/-|frameshift_variant	104.01359247289065	0.03510646158778409	6				NaN	NaN	0	NaN	6604	3151	9754
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9758	27.307	NaN	17985	30	0	2897.4	0.106			+	23389	LAAEREKLGM	10	78	378.53774774351973	1132.5914138307592	3	378.5389709472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_LAAEREKLGM(Oxidation (M))_	REV__ENSG00000180357|ENST00000326648|ZNF609	41.42661286455405	0.5359995577334734	6				NaN	NaN	0	NaN	6605	3151	9754
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9759	27.309	NaN	51598	30	0	15185	0.106				-1	 	0	93	391.2383597853234	1170.6932499561701	3	391.2397155761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6606	3151	9754
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9760	27.311	NaN	14366	30	0	1639.2	0.036	+			29512	PDPEVLCPPK	10	81	547.7822308507714	NaN	0	547.7830810546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PDPEVLCPPK_	ENST00000607001.1_1_5:72793842-72794073:-|nuORF	54.776311868738084	0.27540594196716844	6				NaN	NaN	0	NaN	6607	3151	9754
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9761	27.311	NaN	11098	30	0	1584	0.145	+			18350	IQKFHTTSR	9	79	373.208579253558	1116.6039083608741	3	373.2098083496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IQKFHTTSR_	ENSG00000111886|ENST00000402938|GABRR2;nc|ENSG00000111886|P28476-2|GABRR2	35.61828744233558	0.47037581924408073	6				NaN	NaN	0	NaN	6608	3151	9754
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9779	27.351	NaN	86359	30	0	17105	0.181				-1	 	0	92	509.29906040236244	1016.5835678715249	2	509.3006591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6623	3154	9778
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9780	27.354	NaN	62434	30	0	7526.6	0.106				-1	LQFGHMSVTV	10	95	567.7837184234598	1133.5528839137196	2	567.7857055664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LQFGHM(Oxidation (M))SVTV_	ENSG00000130702|ENST00000252999|LAMA5;ENST00000370691.6_1_20:60885298-60889553:-|nuORF;LAMA5|p.A3459Qfs*25|1|0.42|ENSG00000130702|chr20:62310736-62310736|C/-|frameshift_variant;LAMA5|p.P3242Rfs*47|1|0.41|ENSG00000130702|chr20:62311700-62311700|C/-|frameshift_variant	101.60071028292904	0.07294315263144992	6				NaN	NaN	0	NaN	6624	3154	9778
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9781	27.356	NaN	30309	30	0	5354.7	0.106	+			51250	YQPFELRE	8	88	541.2677004957537	1080.5208480583074	2	541.7728271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YQPFELRE_	ENSG00000188827|ENST00000294008|SLX4;nc|ENSG00000188827|Q8IY92-2|SLX4	58.78195531508484	0.5138399468736706	6				NaN	NaN	0	NaN	6625	3154	9778
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9782	27.358	NaN	32793	30	0	6677.7	0.106				-1	 	0	87	414.2455408147878	1239.7147930445633	3	414.2467041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6626	3154	9778
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9783	27.36	NaN	17954	30	0	2401.4	0.106			+	-1	TQHLFSLNK	9	90	565.3034110886088	1128.5922692440174	2	565.3055419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))TQHLFSLNK_	REV__ENST00000407431.5_1_22:26908144-26908183:-|nuORF	68.84614121027924	0.14577793175421136	6				NaN	NaN	0	NaN	6627	3154	9778
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9784	27.361	NaN	11751	30	0	851.12	0.106				-1	 	0	84	557.7946193183377	1113.5746857034753	2	557.7964477539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6628	3154	9778
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9785	27.363	NaN	20388	30	0	3196.3	0.036				-1	 	0	83	533.2810658084314	1064.5475786836628	2	533.2827758789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6629	3154	9778
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9803	27.401	NaN	14859	30	0	1417.9	0.214	+			364	AAQNSRLSL	9	77	480.2657480715496	958.5169432098992	2	480.2667236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAQNSRLSL_	ENSG00000008869|ENST00000233099|HEATR5B;nc|ENSG00000008869|Q9P2D3-2|HEATR5B;nc|ENSG00000008869|Q9P2D3-3|HEATR5B	83.6470233535746	0.08277643980271215	6				NaN	NaN	0	NaN	6644	3157	9802
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9804	27.404	NaN	30826	30	0	7195.2	0.106			+	32852	RCSGTSVSTQ	10	88	513.237866931794	1024.4611809303879	2	513.2395629882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RCSGTSVSTQ_	REV__ENST00000597598.1_1_19:44238621-44241785:-|nuORF	96.66504779109242	0.09291513985748291	6				NaN	NaN	0	NaN	6645	3157	9802
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9805	27.407	NaN	20127	30	0	2576	0.106			+	21388	KMLIIQYIS	9	80	554.8255460381339	1107.6365391430677	2	554.8275756835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KMLIIQYIS_	REV__ENST00000556551.2_1_14:74325599-74340738:+|nuORF	35.61828744233558	0.47037581924408073	6				NaN	NaN	0	NaN	6646	3157	9802
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9806	27.408	NaN	16468	30	0	3000.6	0.106				-1	 	0	91	470.8116721871907	939.6087914411814	2	470.81280517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6647	3157	9802
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9807	27.41	NaN	7780	30	0	1712.3	0.106	+			35209	SAKKVYGAAI	10	52	336.5344378546052	NaN	0	336.53424072265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SAKKVYGAAI_	DENND4C|p.F1650Yfs*12|1|0.38|ENSG00000137145|chr9:19358095-19358096|TT/-|frameshift_variant;DENND4C|p.R1677Dfs*12|1|0.24|ENSG00000137145|chr9:19360255-19360255|A/-|frameshift_variant;ENSG00000137145|ENST00000434457|DENND4C;ENST00000380437.8_1_9:19290781-19335045:+|nuORF;nc|ENSG00000137145|Q5VZ89-3|DENND4C;nc|ENSG00000137145|Q5VZ89-5|DENND4C;nc|ENSG00000137145|Q5VZ89|DENND4C	17.364965105453717	0.4201028297492154	6				NaN	NaN	0	NaN	6648	3157	9802
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9808	27.412	NaN	5596.7	30	0	804.79	0.03				-1	 	0	64	322.19264715823056	642.3707413832611	2	322.1935729980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6649	3157	9802
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9809	27.412	NaN	2998.4	30	0	247.01	0.14			+	17877	IGAMACRPL	9	61	330.1737606719689	987.4994526161067	3	330.17474365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_IGAMAC(Carbamidomethyl (C))RPL_	REV__ENST00000512792.2_1_12:112191278-112193633:+|nuORF	45.9519527083369	0.35044536499095585	6				NaN	NaN	0	NaN	6650	3157	9802
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9827	27.452	NaN	79276	30	0	7660.9	0.212	+			8960	EFFCRDGFSR	10	101	660.7924861959805	1319.5704194587609	2	660.7944946289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_EFFC(Carbamidomethyl (C))RDGFSR_	ENSG00000186684|ENST00000664447|CYP27C1;nc|ENSG00000186684|Q4G0S4|CYP27C1	82.7504851949679	0.1731497355276012	6				NaN	NaN	0	NaN	6665	3160	9826
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9828	27.455	NaN	50412	30	0	27196	0.106			+	37352	SLFAQVLQ	8	81	453.2584080314192	904.5022631296384	2	453.25970458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLFAQVLQ_	REV__ENSG00000137875|ENST00000260442|BCL2L10	102.7733458925114	0.2491487235419157	6				NaN	NaN	0	NaN	6666	3160	9826
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9829	27.458	NaN	13126	30	0	1642.1	0.106	+			34357	RTQGLMIMK	9	97	359.86843414072496	NaN	0	359.8684387207031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RTQGLMIMK_	ENSG00000137275|ENST00000259808|RIPK1;nc|ENSG00000137275|Q13546-2|RIPK1	99.01295224348159	0.023427377858318825	6				NaN	NaN	0	NaN	6667	3160	9826
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9830	27.459	NaN	12586	30	0	3166.6	0.106			+	25863	LSFHIMKL	8	84	502.7832905957923	1003.5520282583847	2	502.7847595214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_LSFHIM(Oxidation (M))KL_	REV__WDPCP|p.G744S|1|0.34|ENSG00000143951|chr2:63122017-63122017|C/T|missense_variant	60.97194046774394	0.49215940876911696	6				NaN	NaN	0	NaN	6668	3160	9826
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9831	27.461	NaN	19307	30	0	10563	0.106			+	41625	SVQRNACSLQL	11	76	406.88104900901635	1217.621317627249	3	406.88226318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVQRNACSLQL_	REV__ENSG00000144821|ENST00000693548|MYH15	48.601550744091256	0.44024757269956427	6				NaN	NaN	0	NaN	6669	3160	9826
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9832	27.463	NaN	12915	30	0	1458.4	0.038			+	21375	KMGRPFPVEGT	11	87	609.8183461412178	1217.6221393492356	2	609.8204345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KMGRPFPVEGT_	REV__DENND4C|p.F1650Yfs*12|1|0.38|ENSG00000137145|chr9:19358095-19358096|TT/-|frameshift_variant;REV__DENND4C|p.R1677Dfs*12|1|0.24|ENSG00000137145|chr9:19360255-19360255|A/-|frameshift_variant;REV__ENSG00000137145|ENST00000434457|DENND4C;REV__nc|ENSG00000137145|Q5VZ89-3|DENND4C;REV__nc|ENSG00000137145|Q5VZ89-5|DENND4C;REV__nc|ENSG00000137145|Q5VZ89|DENND4C	85.16082228582465	0.11858485847190207	6				NaN	NaN	0	NaN	6670	3160	9826
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9833	27.464	NaN	66928	30	0	6731.6	0.141			+	18384	IRDNSLKQL	9	88	543.8171444736607	1085.6197360141214	2	543.8189697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IRDNSLKQL_	REV__ENSG00000135744|ENST00000366667|AGT	106.68306549817024	0.032382560583716295	6				NaN	NaN	0	NaN	6671	3160	9826
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9851	27.503	NaN	35160	30	0	3414.6	0.214	+			47412	VPPARKSSEE	10	98	550.2910716113887	1098.5675902895773	2	550.29296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VPPARKSSEE_	ENSG00000164684|ENST00000327835|ZNF704;ZNF704|p.L253Pfs*36|1|0.05|ENSG00000164684|chr8:80664984-80664985|-/AAACCAG|frameshift_variant	84.9155231211612	0.16018353804806162	6				NaN	NaN	0	NaN	6686	3163	9850
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9852	27.507	NaN	140760	30	0	92263	0.106	+			15676	GVMRVGLVAK	10	112	343.87808997882485	1028.6124405366745	3	343.8793640136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GVMRVGLVAK_	ENSG00000129351|ENST00000588657|ILF3;ENST00000587928.5_1_19:10781281-10792148:+|nuORF;nc|ENSG00000129351|Q12906-2|ILF3;nc|ENSG00000129351|Q12906-3|ILF3;nc|ENSG00000129351|Q12906-4|ILF3;nc|ENSG00000129351|Q12906-5|ILF3;nc|ENSG00000129351|Q12906-6|ILF3;nc|ENSG00000129351|Q12906|ILF3	64.20726635412375	0.3275756395432415	6				NaN	NaN	0	NaN	6687	3163	9850
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9853	27.509	NaN	67408	30	0	8467	0.106			+	33561	RLGCRRLR	8	108	515.3136850663196	1028.6128171994392	2	515.3154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RLGCRRLR_	REV__ENST00000449739.6_1_4:73923833-73935428:-|nuORF	79.71258880314673	0.32596852995588826	6				NaN	NaN	0	NaN	6688	3163	9850
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9854	27.511	NaN	22246	30	0	3959.9	0.106			+	-1	PCCIRAQGL	9	87	509.25163553366326	1016.4887181341265	2	509.25347900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_PCC(Carbamidomethyl (C))IRAQGL_	REV__ENST00000557894.5_1_14:24634074-24635402:+|nuORF	45.9519527083369	0.35044536499095585	6				NaN	NaN	0	NaN	6689	3163	9850
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9855	27.512	NaN	17152	30	0	1463.2	0.106			+	18530	ISLGNVIGSA	10	83	465.76667451814734	NaN	0	465.76605224609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ISLGNVIGSA_	REV__tr|U7STT8|U7STT8_FUSNUManganese/zinc/irontransportsystempermeaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01565PE=3SV=1	85.16082228582465	0.07406536248925066	6				NaN	NaN	0	NaN	6690	3163	9850
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9856	27.514	NaN	29415	30	0	3309	0.035	+			46596	VFQEHQTL	8	87	501.25484034552323	1000.4951277578465	2	501.25604248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VFQEHQTL_	ENSG00000085733|ENST00000301843|CTTN;ENST00000415461.2_1_11:70253665-70266006:+|nuORF;nc|ENSG00000085733|Q14247-2|CTTN;nc|ENSG00000085733|Q14247-3|CTTN	122.1759843771914	0.23144439946795717	6				NaN	NaN	0	NaN	6691	3163	9850
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9857	27.515	NaN	18939	30	0	3380.2	0.144			+	6545	AYGLWSKKE	9	92	361.19359229389016	1080.5589474818705	3	361.1939392089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AYGLWSKKE_	REV__ENSG00000005810|ENST00000544440|MYCBP2;REV__MYCBP2|p.C1064Ifs*31|1|0.09|ENSG00000005810|chr13:77211267-77211279|TTATCAGAAGGCA/-|frameshift_variant;REV__MYCBP2|p.G651Efs*24|1|0.04|ENSG00000005810|chr13:77257781-77257782|-/ATTAGTTTTT|frameshift_variant;REV__MYCBP2|p.N1867Tfs*9|1|0.15|ENSG00000005810|chr13:77171572-77171572|T/-|frameshift_variant;REV__MYCBP2|p.N3049*|1|0.11|ENSG00000005810|chr13:77097894-77097895|TT/-|frameshift_variant;REV__MYCBP2|p.P4047Qfs*26|2|0.35|ENSG00000005810|chr13:77067782-77067782|G/-|frameshift_variant;REV__MYCBP2|p.T1507Ffs*24|1|0.04|ENSG00000005810|chr13:77185189-77185190|-/TTGTAAA|frameshift_variant;REV__MYCBP2|p.T4311Pfs*37|1|0.14|ENSG00000005810|chr13:77059619-77059619|G/-|frameshift_variant;REV__MYCBP2|p.V3749*|1|0.12|ENSG00000005810|chr13:77081486-77081486|C/-|frameshift_variant;REV__nc|ENSG00000005810|O75592-2|MYCBP2	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	6692	3163	9850
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9875	27.553	NaN	21389	30	0	4530.4	0.214				-1	 	0	67	477.25493656346345	952.4953201937269	2	477.25592041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6707	3166	9874
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9876	27.557	NaN	18966	30	0	2129.7	0.106				-1	 	0	83	490.244221642987	978.473890352774	2	490.24554443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6708	3166	9874
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9877	27.559	NaN	7254.2	30	0	761.91	0.106	+			32659	RAAPAFLK	8	68	437.26914719009727	872.5237414469946	2	437.2703857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RAAPAFLK_	DTNA|p.A558Qfs*40|1|0.28|ENSG00000134769|chr18:34875244-34875244|G/-|frameshift_variant;ENSG00000134769|ENST00000444659|DTNA;nc|ENSG00000134769|Q9Y4J8-11|DTNA;nc|ENSG00000134769|Q9Y4J8-3|DTNA;nc|ENSG00000134769|Q9Y4J8-4|DTNA;nc|ENSG00000134769|Q9Y4J8-6|DTNA;nc|ENSG00000134769|Q9Y4J8|DTNA	42.47446043378293	0.6409579893742323	6				NaN	NaN	0	NaN	6709	3166	9874
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9878	27.561	NaN	16966	30	0	3111.6	0.106				-1	 	0	85	412.7336060520689	823.4526591709379	2	412.7347717285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6710	3166	9874
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9879	27.563	NaN	10581	30	0	3478.6	0.106			+	25667	LRDGLRGHGL	10	67	365.2120868090717	1092.614431027415	3	365.2131652832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LRDGLRGHGL_	REV__ENST00000447654.5_1_6:34213577-34213877:+|nuORF	23.52269567125451	0.6877354443478558	6				NaN	NaN	0	NaN	6711	3166	9874
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9880	27.564	NaN	27433	30	0	11843	0.037	+			20155	KEKRAARVK	9	85	362.5679969529436	1084.6821614590308	3	362.5690612792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KEKRAARVK_	ENST00000479713.1_1_Y:15591430-15591511:-|nuORF	47.95952297671804	0.32689736945648856	6				NaN	NaN	0	NaN	6712	3166	9874
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9881	27.565	NaN	7954.5	30	0	831.56	0.14			+	13120	GGGPGARGAEY	11	70	496.23374699437915	990.4529410555583	2	496.2349853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GGGPGARGAEY_	REV__ENSG00000173153|ENST00000000442|ESRRA;REV__nc|ENSG00000173153|P11474-2|ESRRA	36.446750945000026	0.6065623449959539	6				NaN	NaN	0	NaN	6713	3166	9874
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9899	27.604	NaN	21290	30	0	4471.6	0.214	+			6634	AYSVEHNQL	9	79	530.7551552994736	1059.495757665747	2	530.7568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AYSVEHNQL_	ENSG00000117523|ENST00000647382|PRRC2C;nc|ENSG00000117523|Q9Y520-2|PRRC2C;nc|ENSG00000117523|Q9Y520-3|PRRC2C;nc|ENSG00000117523|Q9Y520-4|PRRC2C;nc|ENSG00000117523|Q9Y520-5|PRRC2C;nc|ENSG00000117523|Q9Y520-6|PRRC2C;nc|ENSG00000117523|Q9Y520|PRRC2C;PRRC2C|p.K1018Nfs*7|1|0.21|ENSG00000117523|chr1:171540521-171540521|A/-|frameshift_variant;PRRC2C|p.P2791Lfs*5|1|0.1|ENSG00000117523|chr1:171591761-171591761|C/-|frameshift_variant	87.69643885390035	0.07135982304947239	6				NaN	NaN	0	NaN	6728	3169	9898
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9900	27.608	NaN	39885	30	0	3549.6	0.106	+			15335	GTVIVDSTVGK	11	99	538.3019022387044	1074.5892515442088	2	538.3037719726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTVIVDSTVGK_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	134.38175178908594	0.0009546753189824793	6				NaN	NaN	0	NaN	6729	3169	9898
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9901	27.61	NaN	18388	30	0	1684.1	0.106				-1	 	0	90	492.8121218950809	983.6096908569618	2	492.8135070800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6730	3169	9898
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9902	27.612	NaN	23968	30	0	1868.4	0.106	+			50700	YEEQHPEL	8	99	522.73489504566	1043.4552371581199	2	522.7364501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YEEQHPEL_	ENSG00000008517|ENST00000525643|IL32;nc|ENSG00000008517|P24001-3|IL32;nc|ENSG00000008517|P24001-4|IL32;nc|ENSG00000008517|P24001-5|IL32;nc|ENSG00000008517|P24001-6|IL32;nc|ENSG00000008517|P24001|IL32	93.1432384553994	0.2679547234115296	6				NaN	NaN	0	NaN	6731	3169	9898
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9903	27.614	NaN	10895	30	0	3819	0.106			+	43543	THFFAELVQ	9	71	546.2780131850101	1090.54147343682	2	546.2814331054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_THFFAELVQ_	REV__ENSG00000164190|ENST00000282516|NIPBL;REV__nc|ENSG00000164190|Q6KC79-2|NIPBL;REV__NIPBL|p.I2776Lfs*3|1|0.17|ENSG00000164190|chr5:37064797-37064797|A/-|frameshift_variant	44.116797842482775	0.37197099687881774	6				NaN	NaN	0	NaN	6732	3169	9898
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9904	27.615	NaN	12719	30	0	5366.2	0.035	+			23545	LAKRNRRA	8	91	328.87720800386194	983.6097946117859	3	328.8782043457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LAKRNRRA_	ENSG00000124228|ENST00000618172|DDX27;ENST00000471144.1_1_20:47852884-47860241:+|nuORF;ENST00000484427.5_1_20:47852594-47860368:+|nuORF;nc|ENSG00000124228|Q96GQ7|DDX27	28.2542754592877	0.7411748056684583	6				NaN	NaN	0	NaN	6733	3169	9898
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9905	27.616	NaN	10391	30	0	987.91	0.141			+	36583	SFVHAGREAM	10	76	560.7638430920329	1119.5131332508656	2	560.7661743164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_SFVHAGREAM(Oxidation (M))_	REV__ENSG00000064313|ENST00000378164|TAF2;REV__TAF2|p.A1003Lfs*3|1|0.21|ENSG00000064313|chr8:119746807-119746807|T/-|frameshift_variant;REV__TAF2|p.I604Sfs*3|1|0.11|ENSG00000064313|chr8:119785250-119785250|T/-|frameshift_variant	51.19269402634007	0.44601001148513897	6				NaN	NaN	0	NaN	6734	3169	9898
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9923	27.655	NaN	117790	30	0	82071	0.174				-1	 	0	73	460.2520597535299	918.4895665738599	2	460.2533264160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6749	3172	9922
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9924	27.658	NaN	30925	30	0	8124.4	0.106	+			39752	STITGVMDK	9	79	476.24319972582083	950.4718465184417	2	476.2442932128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STITGVMDK_	ENSG00000147872|ENST00000276914|PLIN2;PLIN2|p.V348*|1|0.15|ENSG00000147872|chr9:19116520-19116520|C/-|frameshift_variant	129.42129120953632	0.01549634589885217	6				NaN	NaN	0	NaN	6750	3172	9922
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9925	27.661	NaN	31324	30	0	8846.6	0.106				-1	 	0	104	348.5523589378938	1042.6352474138814	3	348.55340576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6751	3172	9922
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9926	27.662	NaN	44582	30	0	28233	0.106				-1	ALMKNKAKT	9	70	340.867396436017	1019.580359908251	3	340.868408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_ALM(Oxidation (M))KNKAKT_	ENST00000360772.7_2_3:123332334-123332625:-|nuORF	26.69291269510374	0.5537881896960711	6				NaN	NaN	0	NaN	6752	3172	9922
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9927	27.664	NaN	21727	30	0	3897.6	0.106	+			19795	KEARKVSR	8	79	487.29863912197897	972.582725310758	2	487.2998962402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEARKVSR_	ENSG00000141404|ENST00000334049|GNAL;GNAL|p.L333*|1|0.17|ENSG00000141404|chr18:11876683-11876683|T/-|frameshift_variant	82.30502934623384	0.30436709589983096	6				NaN	NaN	0	NaN	6753	3172	9922
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9928	27.666	NaN	33203	30	0	1688.3	0.106			+	47235	VMLLWRIL	8	100	522.325118603519	1042.6356842738378	2	522.3267211914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VMLLWRIL_	REV__ENSG00000163545|ENST00000367157|NUAK2	77.94384346573518	0.3407065481025094	6				NaN	NaN	0	NaN	6754	3172	9922
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9929	27.668	NaN	12834	30	0	8655.3	0.038			+	-1	WCVLVELCR	9	72	617.8065115704101	1233.59847020762	2	617.80859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C)	_WC(Carbamidomethyl (C))VLVELC(Carbamidomethyl (C))R_	REV__HERVH-int_dup3527|chrX:4542813-4545870:-|8.094520876636611|0.0139942278604804|9.18|476.0|82|1|anti-sense	53.351449002276354	0.2690372970092375	6				NaN	NaN	0	NaN	6755	3172	9922
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9947	27.705	NaN	27976	30	0	3487.6	0.214	+			1799	AIFKPVMSK	9	104	510.7978999187672	1019.5812469043344	2	510.7991027832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AIFKPVMSK_	ENSG00000116478|ENST00000373548|HDAC1	106.88024417677582	0.032181361622142884	6				NaN	NaN	0	NaN	6770	3175	9946
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9948	27.709	NaN	17004	30	0	2456.4	0.106	+			43866	TMDKSELVQK	10	84	610.8119151767404	1219.6092774202807	2	610.8134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))TMDKSELVQK_	ENSG00000166913|ENST00000353703|YWHAB	155.5846463517096	0.00750394161302585	6				NaN	NaN	0	NaN	6771	3175	9946
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9949	27.711	NaN	27625	30	0	4356.1	0.106				-1	CMALRKGSF	9	90	543.265041723514	1084.5155305138278	2	543.2669067382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_C(Carbamidomethyl (C))M(Oxidation (M))ALRKGSF_	PITPNM2|p.R1270C|1|0.1|ENSG00000090975|chr12:122986269-122986269|G/A|missense_variant	85.35947970620816	0.07794846947388434	6				NaN	NaN	0	NaN	6772	3175	9946
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9950	27.713	NaN	13255	30	0	2878.4	0.106				-1	 	0	77	434.7194444504047	867.4243359676094	2	434.720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6773	3175	9946
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9951	27.715	NaN	10377	30	0	3941	0.106				-1	KMGKTAKG	8	65	418.73744693457735	835.4603409359547	2	418.7384033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_KM(Oxidation (M))GKTAKG_	tr|U7T0F0|U7T0F0_FUSNUTyrosine--tRNAligaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=tyrSPE=3SV=1	30.503639358989545	0.7238069182250283	6				NaN	NaN	0	NaN	6774	3175	9946
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9952	27.716	NaN	9011	30	0	1068.2	0.033				-1	 	0	75	444.26216522600413	886.5097775188083	2	444.2632141113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6775	3175	9946
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9953	27.717	NaN	24670	30	0	4223.7	0.14	+			20240	KELTIGSKL	9	88	494.8053210114199	NaN	0	494.80535888671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KELTIGSKL_	ENSG00000197956|ENST00000368719|S100A6	187.50397467658743	0.001626693970246865	6				NaN	NaN	0	NaN	6776	3175	9946
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9971	27.756	NaN	39220	30	0	3389.2	0.211				-1	 	0	96	550.3014016586799	1098.5882503841597	2	550.3035278320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6791	3178	9970
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9972	27.76	NaN	37862	30	0	4873.2	0.106				-1	 	0	95	458.2308046552486	914.4470563772973	2	458.23193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6792	3178	9970
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9973	27.762	NaN	38601	30	0	7550.3	0.106	+			3639	ASWGGTIEK	9	99	474.74293003619084	NaN	0	474.74267578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASWGGTIEK_	ENSG00000144426|ENST00000683969|NBEAL1;NBEAL1|p.A1274Qfs*17|1|0.1|ENSG00000144426|chr2:203135766-203135766|A/-|frameshift_variant;NBEAL1|p.F1670Lfs*25|1|0.21|ENSG00000144426|chr2:203144843-203144843|T/-|frameshift_variant;NBEAL1|p.F2315Lfs*2|1|0.17|ENSG00000144426|chr2:203193900-203193900|T/-|frameshift_variant;NBEAL1|p.K2562Rfs*15|1|0.41|ENSG00000144426|chr2:203209306-203209306|A/-|frameshift_variant;NBEAL1|p.N2072Kfs*10|1|0.35|ENSG00000144426|chr2:203172825-203172826|-/A|frameshift_variant;NBEAL1|p.T1311Nfs*3|1|0.08|ENSG00000144426|chr2:203135875-203135876|-/A|frameshift_variant;nc|ENSG00000144426|Q6ZS30-1|NBEAL1;nc|ENSG00000144426|Q6ZS30|NBEAL1	112.41091882917199	0.007519870935348052	6				NaN	NaN	0	NaN	6793	3178	9970
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9974	27.764	NaN	27679	30	0	4347.1	0.106	+			32299	QTPANPWEF	9	88	545.2534267113916	1088.4923004895832	2	545.2557373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QTPANPWEF_	BUB1|p.K824T|1|0.35|ENSG00000169679|chr2:110641796-110641796|T/G|missense_variant	69.6276240434122	0.14239879520340665	6				NaN	NaN	0	NaN	6794	3178	9970
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9975	27.766	NaN	18958	30	0	1593	0.106	+			36887	SIGRAIRHQ	9	84	519.3016320534542	1036.5887111737084	2	519.3032836914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SIGRAIRHQ_	ENSG00000013573|ENST00000542838|DDX11;ENST00000435753.6_1_12:31250908-31256767:+|nuORF;ENST00000536265.5_1_12:31242773-31256767:+|nuORF;nc|ENSG00000013573|Q96FC9-3|DDX11;nc|ENSG00000013573|Q96FC9-4|DDX11;nc|ENSG00000214826|Q92771|DDX12P;nc|ENSG00000256263|A8MPP1|DDX11L8	43.650786325866115	0.37743712540499297	6				NaN	NaN	0	NaN	6795	3178	9970
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9976	27.768	NaN	16711	30	0	3795.7	0.035	+			49874	VYTDCSNKL	9	93	521.745810614982	1041.477068296764	2	521.7474975585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VYTDCSNKL_	ENSG00000183530|ENST00000327423|PRR14L;nc|ENSG00000183530|Q5THK1-2|PRR14L;nc|ENSG00000183530|Q5THK1-3|PRR14L;nc|ENSG00000183530|Q5THK1-4|PRR14L;PRR14L|p.L1550*|1|0.31|ENSG00000183530|chr22:31713190-31713190|A/-|frameshift_variant	49.536043120802724	0.308405419312776	6				NaN	NaN	0	NaN	6796	3178	9970
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9977	27.768	NaN	5607.9	30	0	1455.2	0.14				-1	 	0	74	527.3047489956069	1052.5949450580138	2	527.306396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6797	3178	9970
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9995	27.807	NaN	443720	30	0	53144	0.148				-1	 	0	94	554.7831999251192	1107.5518469170383	2	554.7850341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6812	3181	9994
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9996	27.81	NaN	30586	30	0	5328.1	0.106			+	17834	IFIIMIIAG	9	90	495.80678081362936	989.5990086940587	2	495.80810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IFIIMIIAG_	REV__tr|U7SGN0|U7SGN0_FUSNUDUF368domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02254PE=4SV=1	49.21078951299608	0.3122205139198386	6				NaN	NaN	0	NaN	6813	3181	9994
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9997	27.812	NaN	37666	30	0	5945.2	0.106			+	45837	VAKQGEREK	9	102	522.7937542417314	1043.5729555502628	2	522.7957153320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VAKQGEREK_	REV__ENSG00000116580|ENST00000368331|GON4L;REV__ENST00000500626.2_1_1:155585459-155586181:-|nuORF;REV__nc|ENSG00000116580|Q3T8J9-3|GON4L	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	6814	3181	9994
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9998	27.814	NaN	32506	30	0	3476.6	0.106			+	2402	APAHSRVAGE	10	91	497.75743414942957	993.5003153656592	2	497.7587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_APAHSRVAGE_	REV__ENST00000316418.9_1_5:424040-432966:+|nuORF;REV__ENST00000505113.5_1_5:424040-432966:+|nuORF	54.776311868738084	0.41334902933431344	6				NaN	NaN	0	NaN	6815	3181	9994
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	9999	27.816	NaN	21875	30	0	4422.7	0.106				-1	 	0	78	399.19374815549634	796.3729433777927	2	399.1949462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6816	3181	9994
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10000	27.817	NaN	18651	30	0	1684.9	0.106			+	31713	QNRSRVHL	8	95	337.19240536356835	1008.5553866909052	3	337.1940612792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QNRSRVHL_	REV__ENSG00000198624|ENST00000355417|CCDC69;REV__ENST00000521308.5_1_5:150563000-150603580:-|nuORF	34.172542307311794	0.6954784234644539	6				NaN	NaN	0	NaN	6817	3181	9994
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10001	27.819	NaN	26328	30	0	3028.8	0.036			+	-1	SLQSCCCC	8	108	537.6785132207021	1073.3424735082042	2	537.6812744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	4 Carbamidomethyl (C)	_SLQSC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))_	REV__ENST00000006750.7_1_17:62007703-62009599:-|nuORF	35.61828744233558	0.6843154725607303	6				NaN	NaN	0	NaN	6818	3181	9994
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10019	27.856	NaN	256510	30	0	107780	0.094				-1	 	0	84	475.7674847476774	949.5204165621548	2	475.7686767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6833	3184	10018
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10020	27.857	NaN	220030	30	0	37218	0.106				-1	 	0	72	440.6941209096677	879.3736888861354	2	440.6952819824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6834	3184	10018
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10021	27.859	NaN	47353	30	0	5846.8	0.106			+	22208	KSTSKLKKR	9	110	538.3515749517464	1074.6885969702928	2	538.3533935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KSTSKLKKR_	REV__ENSG00000087338|ENST00000282570|GMCL1;REV__ENST00000468386.2_1_2:70057024-70067283:+|nuORF	35.17822180527639	0.47448846649768284	6				NaN	NaN	0	NaN	6835	3184	10018
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10022	27.861	NaN	33388	30	0	4258.9	0.106	+			46524	VEWNKKEEL	9	101	587.8089030605391	NaN	0	587.8092041015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VEWNKKEEL_	BZW1|p.S325Rfs*19|1|0.04|ENSG00000082153|chr2:200819989-200819990|-/ACAATATAGAA|frameshift_variant;ENSG00000082153|ENST00000409600|BZW1;ENSG00000136261|ENST00000258761|BZW2;nc|ENSG00000082153|Q7L1Q6-3|BZW1;nc|ENSG00000082153|Q7L1Q6-4|BZW1	136.98908636845044	0.00038087405662700757	6				NaN	NaN	0	NaN	6836	3184	10018
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10023	27.863	NaN	44502	30	0	18115	0.106			+	45801	VAHTESEKTI	10	86	557.7910717263842	1113.5675905195683	2	557.7991943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VAHTESEKTI_	REV__DSPP|p.N1002Kfs*4|1|0.09|ENSG00000152591|chr4:87615665-87615666|-/A|frameshift_variant;REV__ENSG00000152591|ENST00000651931|DSPP	79.71258880314673	0.19796908725841375	6				NaN	NaN	0	NaN	6837	3184	10018
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10024	27.865	NaN	19923	30	0	10239	0.106			+	22058	KSKKKGKGSK	10	84	359.2366209479859	1074.6880334441578	3	359.2376403808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KSKKKGKGSK_	REV__ENSG00000125743|ENST00000342669|SNRPD2;REV__nc|ENSG00000125743|P62316-2|SNRPD2	18.531049691330335	0.7222854500618138	6				NaN	NaN	0	NaN	6838	3184	10018
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10025	27.867	NaN	13271	30	0	1565.5	0.106	+			2386	ANRPDASSL	9	72	465.73616722602407	929.4577815188482	2	465.7373352050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ANRPDASSL_	ENST00000323460.9_1_3:196594808-196612056:+|nuORF	60.11826168202944	0.21262886028301267	6				NaN	NaN	0	NaN	6839	3184	10018
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10026	27.869	NaN	15838	30	0	1351.3	0.036				-1	 	0	91	525.2706817947461	524.2634053281461	1	525.2733764648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6840	3184	10018
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10044	27.904	NaN	206970	30	0	147660	0.167			+	37836	SNDKPIIIQ	9	92	343.19766570240824	NaN	0	343.1988220214844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SNDKPIIIQ_	REV__ENSG00000127995|ENST00000297273|CASD1	28.081489160057373	0.33578952234132536	6				NaN	NaN	0	NaN	6855	3187	10043
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10045	27.907	NaN	141140	30	0	24917	0.106			+	20721	KGSSIRRREL	10	108	601.3595538084585	1200.7045546837169	2	601.3609619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KGSSIRRREL_	REV__ENSG00000140543|ENST00000268148|DET1;REV__nc|ENSG00000173867|Q7L5Y6-2|DET1	82.83050618871818	0.17249597090446123	6				NaN	NaN	0	NaN	6856	3187	10043
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10046	27.909	NaN	41877	30	0	16638	0.106	+			16547	HEVMEQQTL	9	80	557.7620536786218	1113.5095544240435	2	557.7637329101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HEVMEQQTL_	ENSG00000104738|ENST00000649973|MCM4;MCM4|p.T629Qfs*18|2|0.31|ENSG00000104738|chr8:47971419-47971419|A/-|frameshift_variant	112.10723106719422	0.02684780151337622	6				NaN	NaN	0	NaN	6857	3187	10043
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10047	27.911	NaN	63768	30	0	15049	0.106	+			16848	HPEKLATVL	9	99	504.29593269636433	1006.5773124595287	2	504.2977294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HPEKLATVL_	ENSG00000164934|ENST00000612750|DCAF13;ENST00000521716.1_1_8:104427674-104432721:+|nuORF;nc|ENSG00000164934|Q9NV06-2|DCAF13	104.0567914643314	0.03506238181059741	6				NaN	NaN	0	NaN	6858	3187	10043
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10048	27.912	NaN	7272.5	30	0	697.3	0.106	+			20936	KKARRISK	8	79	493.832649657725	985.6507463822501	2	493.8338928222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KKARRISK_	PDIA3|p.Q502Rfs*46|1|0.48|ENSG00000167004|chr15:43771204-43771204|C/-|frameshift_variant	49.44154591367651	0.597725784090933	6				NaN	NaN	0	NaN	6859	3187	10043
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10049	27.914	NaN	15822	30	0	2505.3	0.106				-1	 	0	66	454.7860610798904	907.5575692265808	2	454.78717041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6860	3187	10043
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10050	27.916	NaN	16251	30	0	3135.9	0.035				-1	 	0	90	524.246805033204	1046.479057133208	2	524.2483520507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6861	3187	10043
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10069	27.953	NaN	12418	30	0	3739.9	0.214				-1	 	0	65	422.21279913124596	842.4110453292919	2	422.2139587402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6877	3190	10068
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10070	27.956	NaN	20313	30	0	2291.3	0.106			+	46237	VEDAIHLQN	9	91	519.7630622283511	1037.5115715235022	2	519.76513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VEDAIHLQN_	REV__CSDE1|p.D560Gfs*6|1|0.3|ENSG00000009307|chr1:114725295-114725296|-/C|frameshift_variant;REV__CSDE1|p.V523Wfs*4|1|0.28|ENSG00000009307|chr1:114726284-114726284|C/-|frameshift_variant;REV__ENSG00000009307|ENST00000358528|CSDE1;REV__nc|ENSG00000009307|O75534-2|CSDE1;REV__nc|ENSG00000009307|O75534-3|CSDE1;REV__nc|ENSG00000009307|O75534-4|CSDE1	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	6878	3190	10068
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10071	27.958	NaN	21846	30	0	1539.4	0.106			+	-1	MLLTIILPT	9	100	515.8151667675411	1029.615780601882	2	515.8169555664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))LLTIILPT_	REV__ENST00000246662.8_1_17:39726462-39727664:-|nuORF	53.351449002276354	0.2690372970092375	6				NaN	NaN	0	NaN	6879	3190	10068
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10072	27.96	NaN	15540	30	0	7350.4	0.106			+	47001	VKSTGEVKPI	10	86	529.3150223184246	1056.615491703649	2	529.317138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VKSTGEVKPI_	REV__ENST00000553646.1_1_14:75375979-75376912:-|nuORF;REV__ENST00000555834.5_1_14:75375979-75389943:-|nuORF	45.97224482568171	0.49411383603842696	6				NaN	NaN	0	NaN	6880	3190	10068
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10073	27.962	NaN	29872	30	0	7780.5	0.106			+	34115	RSRRTGPS	8	85	458.75714646383733	915.4997399944747	2	458.7588195800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RSRRTGPS_	REV__DXO|p.P41Lfs*88|1|0.29|ENSG00000204348|chr6:31971562-31971562|C/-|frameshift_variant;REV__ENST00000474587.1_1_6:31938491-31939807:-|nuORF;REV__ENST00000491327.5_1_6:31938898-31939355:-|nuORF	73.97473282117947	0.3737790450121076	6				NaN	NaN	0	NaN	6881	3190	10068
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10074	27.964	NaN	42439	30	0	5919.6	0.036	+			50601	YDNRCRNM	8	95	544.224075420369	1086.433597907538	2	544.2265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_YDNRCRNM(Oxidation (M))_	ENSG00000103356|ENST00000449606|EARS2;ENST00000564987.1_1_16:23541198-23555881:-|nuORF;nc|ENSG00000103356|Q5JPH6-2|EARS2	76.84663266511073	0.3498490246073164	6				NaN	NaN	0	NaN	6882	3190	10068
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10075	27.964	NaN	8095.3	30	0	1067.9	0.143	+			33872	RRLLYALC	8	74	336.5344378546052	NaN	0	336.53436279296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RRLLYALC_	ENSG00000185504|ENST00000327787|FAAP100	20.481830146152948	1.741893751539848	6				NaN	NaN	0	NaN	6883	3190	10068
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10093	28.004	NaN	99064	30	0	20855	0.194	+			9214	EGSEDIIVVAL	11	107	572.8088709302233	1143.6031889272465	2	572.81103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EGSEDIIVVAL_	nc|ENSG00000101336|P08631-3|HCK;nc|ENSG00000101336|P08631-4|HCK	86.88156770896713	0.11154061753057586	6				NaN	NaN	0	NaN	6898	3193	10092
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10094	28.007	NaN	31739	30	0	7035.6	0.106			+	18359	IQNGRQDV	8	87	465.2440245232397	928.4734961132795	2	465.24542236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IQNGRQDV_	REV__ENSG00000185010|ENST00000360256|F8;REV__F8|p.E1101Rfs*17|1|0.25|ENSG00000185010|chrX:154930489-154930490|-/T|frameshift_variant;REV__F8|p.E1292Rfs*16|2|0.53|ENSG00000185010|chrX:154929920-154929920|T/-|frameshift_variant;REV__F8|p.E1988Rfs*4|1|0.36|ENSG00000185010|chrX:154903942-154903943|-/T|frameshift_variant;REV__F8|p.G1291Rfs*29|1|0.48|ENSG00000185010|chrX:154929919-154929920|-/T|frameshift_variant;REV__F8|p.N982Mfs*22|1|0.31|ENSG00000185010|chrX:154930845-154930845|T/-|frameshift_variant	85.35947970620816	0.2915182781752196	6				NaN	NaN	0	NaN	6899	3193	10092
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10095	28.009	NaN	12226	30	0	1579.2	0.106			+	50378	WWVMDGGAL	9	71	517.7414202246911	1033.468287516182	2	517.7433471679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_WWVMDGGAL_	REV__ENSG00000158865|ENST00000424767|SLC5A11;REV__nc|ENSG00000158865|Q8WWX8-2|SLC5A11;REV__nc|ENSG00000158865|Q8WWX8-4|SLC5A11;REV__nc|ENSG00000158865|Q8WWX8-5|SLC5A11	42.47446043378293	0.39123495718708534	6				NaN	NaN	0	NaN	6900	3193	10092
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10096	28.011	NaN	16621	30	0	2612.8	0.106				-1	 	0	75	487.79621985767807	973.5778867821562	2	487.7975769042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6901	3193	10092
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10097	28.013	NaN	7682.5	30	0	631.22	0.106			+	25412	LPLCCDRPGDE	11	85	609.2663352318206	1216.518117530441	2	609.2682495117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LPLCCDRPGDE_	REV__ENST00000327359.7_1_14:105695225-105781678:-|nuORF;REV__ENST00000379937.6_3_14:105695225-105767012:-|nuORF;REV__ENST00000548421.2_1_14:105722813-105767174:-|nuORF	67.49366992349736	0.25663419177724	6				NaN	NaN	0	NaN	6902	3193	10092
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10098	28.014	NaN	10564	30	0	1651.7	0.106	+			51598	YYQDTPKQI	9	78	578.2871588046802	1154.5597646761603	2	578.287841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YYQDTPKQI_	ENSG00000048162|ENST00000614830|NOP16	223.87817336536054	1.204045334314454E-12	6				NaN	NaN	0	NaN	6903	3193	10092
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10099	28.016	NaN	14089	30	0	10297	0.039				-1	SRSAFQCLQK	10	59	408.8765708713778	1223.6078832143335	3	408.8778381347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_SRSAFQC(Carbamidomethyl (C))LQK_	ENSG00000165684|ENST00000684778|SNAPC4;SNAPC4|p.E1230Gfs*16|1|0.21|ENSG00000165684|chr9:136378131-136378138|CCTGGGCT/-|frameshift_variant;SNAPC4|p.P406Rfs*46|1|0.23|ENSG00000165684|chr9:136387755-136387755|G/-|frameshift_variant;SNAPC4|p.P703Qfs*38|1|0.25|ENSG00000165684|chr9:136382033-136382033|G/-|frameshift_variant	37.50817390946774	0.5721060100277453	6				NaN	NaN	0	NaN	6904	3193	10092
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10117	28.053	NaN	167980	30	0	38148	0.15	+			22659	KTYGEIFEK	9	95	557.7910717263842	1113.5675905195683	2	557.7926025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTYGEIFEK_	ENSG00000151366|ENST00000281031|NDUFC2;nc|ENSG00000151366|O95298-2|NDUFC2	160.8219353732433	0.004346709298329381	6				NaN	NaN	0	NaN	6919	3196	10116
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10118	28.055	NaN	56387	30	0	13696	0.106	+			39472	STFDTQITK	9	93	520.7651385217034	1039.5157241102067	2	520.7665405273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STFDTQITK_	ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC;PRKDC|p.D2437Wfs*3|1|0.11|ENSG00000253729|chr8:47840161-47840162|-/CA|frameshift_variant;PRKDC|p.K3681Nfs*6|1|0.32|ENSG00000253729|chr8:47785174-47785177|TTCT/-|frameshift_variant;PRKDC|p.M3670*|1|0.5|ENSG00000253729|chr8:47785212-47785212|T/-|frameshift_variant;PRKDC|p.M3846Cfs*12|1|0.13|ENSG00000253729|chr8:47779047-47779047|T/-|frameshift_variant;PRKDC|p.M4020Cfs*2|1|0.31|ENSG00000253729|chr8:47776968-47776968|T/-|frameshift_variant;PRKDC|p.N3605Kfs*3|1|0.22|ENSG00000253729|chr8:47788993-47788994|-/T|frameshift_variant;PRKDC|p.N4037Ifs*15|1|0.17|ENSG00000253729|chr8:47776916-47776916|T/-|frameshift_variant;PRKDC|p.R2704Gfs*13|2|0.34|ENSG00000253729|chr8:47834238-47834238|T/-|frameshift_variant;PRKDC|p.S3402Ifs*16|1|0.04|ENSG00000253729|chr8:47799302-47799303|-/AAACCGTGAGTTAGAGGAGGTAA|frameshift_variant;PRKDC|p.S4099Qfs*6|1|0.25|ENSG00000253729|chr8:47774265-47774265|A/-|frameshift_variant;PRKDC|p.T3268Pfs*7|1|0.5|ENSG00000253729|chr8:47803426-47803426|T/-|frameshift_variant;PRKDC|p.W3401Cfs*4|1|0.01|ENSG00000253729|chr8:47799304-47799305|-/AATGAATA|frameshift_variant	145.46060221211434	0.007927189773590037	6				NaN	NaN	0	NaN	6920	3196	10116
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10119	28.057	NaN	32010	30	0	4146.5	0.106				-1	 	0	89	443.770115307135	885.52567768107	2	443.771240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6921	3196	10116
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10120	28.059	NaN	42523	30	0	25075	0.106				-1	 	0	82	466.2750829235677	930.5356129139354	2	466.2762145996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6922	3196	10116
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10121	28.061	NaN	55204	30	0	9441.5	0.106			+	21373	KMFQSKCVK	9	103	372.19628347556215	1113.5670210268866	3	372.1973571777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_KM(Oxidation (M))FQSKCVK_	REV__ENST00000479727.1_1_1:224585697-224586694:-|nuORF	75.04331003522576	0.118981335847003	6				NaN	NaN	0	NaN	6923	3196	10116
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10122	28.063	NaN	38885	30	0	4588	0.106	+			43749	TLEFSAFDM	9	108	538.734296496803	1075.454040060406	2	538.736083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_TLEFSAFDM(Oxidation (M))_	ENSG00000197548|ENST00000693202|ATG7;nc|ENSG00000197548|O95352-2|ATG7;nc|ENSG00000197548|O95352-3|ATG7	55.50420428727701	0.2510918378945873	6				NaN	NaN	0	NaN	6924	3196	10116
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10123	28.065	NaN	10652	30	0	1764.6	0.036			+	12405	GEAIQQRLAS	10	81	358.1965762049513	1071.567899215054	3	358.1976623535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GEAIQQRLAS_	REV__ENSG00000178104|ENST00000695795|PDE4DIP;REV__nc|ENSG00000178104|Q5VU43-3|PDE4DIP;REV__nc|ENSG00000178104|Q5VU43-4|PDE4DIP;REV__nc|ENSG00000178104|Q5VU43|PDE4DIP	24.519189625965996	0.6795976720565101	6				NaN	NaN	0	NaN	6925	3196	10116
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10142	28.102	NaN	12368	30	0	1348.8	0.214	+			46168	VDVEQHTL	8	82	470.7386617079947	939.4627704827894	2	470.7400207519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VDVEQHTL_	ENSG00000134057|ENST00000256442|CCNB1;ENSG00000157456|ENST00000288207|CCNB2;nc|ENSG00000134057|P14635-2|CCNB1	124.08010499294276	0.22872207833199332	6				NaN	NaN	0	NaN	6941	3199	10141
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10143	28.106	NaN	27455	30	0	3429.5	0.106	+			26242	LSSRMPHLF	9	100	544.289094629152	1086.563636325104	2	544.2911987304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSSRMPHLF_	ENSG00000136813|ENST00000684092|ECPAS;nc|ENSG00000136813|Q5VYK3|ECPAS	68.78682469695295	0.14603441672067394	6				NaN	NaN	0	NaN	6942	3199	10141
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10144	28.108	NaN	17355	30	0	1877.9	0.106				-1	 	0	72	493.77786816448025	985.5411833957605	2	493.7793273925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6943	3199	10141
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10145	28.11	NaN	19327	30	0	10609	0.106				-1	 	0	69	365.5405290735091	1093.5997578207273	3	365.5415954589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6944	3199	10141
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10146	28.112	NaN	20780	30	0	1659.4	0.106	+			25707	LRMVCQKL	8	94	532.2911868824912	1062.5678208317822	2	532.2930297851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C),Oxidation (M)	_LRM(Oxidation (M))VC(Carbamidomethyl (C))QKL_	ENST00000520849.5_1_8:89341227-89341371:+|nuORF	83.28718786952967	0.2977916691876266	6				NaN	NaN	0	NaN	6945	3199	10141
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10147	28.113	NaN	7809.1	30	0	981.44	0.035	+			1076	AEKYQTVIA	9	72	511.77816045069227	1021.5417679681846	2	511.7798156738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEKYQTVIA_	ENSG00000079459|ENST00000220584|FDFT1;nc|ENSG00000079459|P37268-2|FDFT1;nc|ENSG00000079459|P37268-3|FDFT1;nc|ENSG00000079459|P37268-4|FDFT1	58.22992032128504	0.22837015374068087	6				NaN	NaN	0	NaN	6946	3199	10141
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10148	28.114	NaN	8699.3	30	0	1744.3	0.141			+	-1	VMKKMEKGK	9	89	547.8072238145652	1093.5998946959303	2	547.8095092773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_VM(Oxidation (M))KKMEKGK_	REV__ENST00000504836.5_1_4:89680131-89689179:-|nuORF	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	6947	3199	10141
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10166	28.153	NaN	42184	30	0	5335	0.214			+	11801	FSRSRARK	8	93	504.29593269636433	1006.5773124595287	2	504.79559326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FSRSRARK_	REV__ENSG00000213390|ENST00000358531|ARHGAP19;REV__ENST00000487035.1_1_10:98985881-99016222:-|nuORF;REV__ENST00000492211.5_1_10:98985881-99018422:-|nuORF;REV__nc|ENSG00000213390|Q14CB8-2|ARHGAP19;REV__nc|ENSG00000213390|Q14CB8-3|ARHGAP19;REV__nc|ENSG00000213390|Q14CB8-4|ARHGAP19;REV__nc|ENSG00000213390|Q14CB8-6|ARHGAP19;REV__nc|ENSG00000213390|Q14CB8-7|ARHGAP19	45.9519527083369	0.6193794311207887	6				NaN	NaN	0	NaN	6962	3202	10165
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10167	28.157	NaN	18259	30	0	4649.5	0.106	+			4169	ATFGTQVVEK	10	88	540.2885842022146	1078.562615471229	2	540.2905883789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATFGTQVVEK_	C3|p.A1045Pfs*26|1|0.09|ENSG00000125730|chr19:6694452-6694452|C/-|frameshift_variant;C3|p.S1008Rfs*8|3|0.41|ENSG00000125730|chr19:6694564-6694564|G/-|frameshift_variant;ENSG00000125730|ENST00000245907|C3	109.82975700811294	0.04850514657194457	6				NaN	NaN	0	NaN	6963	3202	10165
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10168	28.159	NaN	22753	30	0	2049.7	0.106			+	12396	GEAALGRTGI	10	89	472.7631645906659	NaN	0	472.7624816894531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEAALGRTGI_	REV__ENSG00000080854|ENST00000533871|IGSF9B;REV__IGSF9B|p.E216Rfs*61|1|0.28|ENSG00000080854|chr11:133937409-133937409|C/-|frameshift_variant;REV__IGSF9B|p.T1083Hfs*72|2|0.42|ENSG00000080854|chr11:133920478-133920479|-/G|frameshift_variant;REV__IGSF9B|p.T1083Pfs*48|1|0.11|ENSG00000080854|chr11:133920479-133920479|G/-|frameshift_variant;REV__nc|ENSG00000080854|Q9UPX0|IGSF9B	63.53385203322761	0.20542021811828953	6				NaN	NaN	0	NaN	6964	3202	10165
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10169	28.161	NaN	15538	30	0	2610.8	0.106	+			47797	VSIGAFGQV	9	71	439.2428723881944	876.4711918431889	2	439.2440490722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSIGAFGQV_	ENSG00000164171|ENST00000296585|ITGA2	87.75429964447693	0.0711966946989736	6				NaN	NaN	0	NaN	6965	3202	10165
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10170	28.163	NaN	33282	30	0	2781.3	0.106	+			11021	FEKIHQETF	9	98	589.7945997959959	1177.5746466587916	2	589.8030395507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FEKIHQETF_	ENSG00000189091|ENST00000302516|SF3B3;nc|ENSG00000189091|Q15393-2|SF3B3	120.63048641472336	0.02081808097628796	6				NaN	NaN	0	NaN	6966	3202	10165
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10171	28.165	NaN	7356.8	30	0	1311.8	0.034				-1	 	0	69	453.2674604617229	904.5203679902459	2	453.2684631347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	6967	3202	10165
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10172	28.165	NaN	11897	30	0	3215.6	0.143			+	23345	KYTIKEARK	9	85	379.5645469714882	1135.6718115146646	3	379.5656433105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KYTIKEARK_	REV__tr|U7SGD6|U7SGD6_FUSNULysMdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02265PE=4SV=1	51.19269402634007	0.2889735674168909	6				NaN	NaN	0	NaN	6968	3202	10165
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10190	28.205	NaN	62011	30	0	33004	0.213			+	22475	KTMSKRKNSI	10	92	604.8428000208414	1207.6710471084828	2	604.8447875976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_KTM(Oxidation (M))SKRKNSI_	REV__ENSG00000108312|ENST00000436088|UBTF;REV__nc|ENSG00000108312|P17480-2|UBTF	45.97224482568171	0.49411383603842696	6				NaN	NaN	0	NaN	6983	3205	10189
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10191	28.208	NaN	70521	30	0	7965	0.106	+			45493	TYDNVHQQF	9	93	576.2596947596998	NaN	0	576.2598876953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TYDNVHQQF_	ENSG00000138639|ENST00000395184|ARHGAP24;nc|ENSG00000138639|Q8N264-2|ARHGAP24;nc|ENSG00000138639|Q8N264-3|ARHGAP24	214.23057602635166	9.318209132711938E-10	6				NaN	NaN	0	NaN	6984	3205	10189
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10192	28.21	NaN	52552	30	0	6140.2	0.106	+			46664	VGFKPETFRK	10	93	403.5641396618751	1207.6705895858254	3	403.5654602050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VGFKPETFRK_	ENSG00000116221|ENST00000360840|MRPL37	30.568863376406313	0.6301935916953115	6				NaN	NaN	0	NaN	6985	3205	10189
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10193	28.212	NaN	39384	30	0	4294.2	0.106	+			21594	KPITTGGVTY	10	88	518.7864169718107	1035.5582810104213	2	518.7874755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KPITTGGVTY_	ENSG00000115641|ENST00000530340|FHL2	91.26522074875469	0.12383023862516404	6				NaN	NaN	0	NaN	6986	3205	10189
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10194	28.214	NaN	23912	30	0	3365.2	0.106			+	-1	CPVCEFCC	8	108	537.6785132207021	1073.3424735082042	2	537.68115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	3 Carbamidomethyl (C)	_C(Carbamidomethyl (C))PVCEFC(Carbamidomethyl (C))C(Carbamidomethyl (C))_	REV__ENSG00000173662|ENST00000333172|TAS1R1;REV__nc|ENSG00000173662|Q7RTX1-2|TAS1R1;REV__nc|ENSG00000173662|Q7RTX1-4|TAS1R1	28.2542754592877	0.7411748056684583	6				NaN	NaN	0	NaN	6987	3205	10189
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10195	28.216	NaN	18678	30	0	1583.1	0.036			+	25147	LLSKCMRQGA	10	99	553.7940414777361	1105.573530022272	2	553.7960205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LLSKCMRQGA_	REV__ENST00000346603.4_1_17:21075288-21081576:+|nuORF;REV__ENST00000579303.5_2_17:21030382-21081576:+|nuORF;REV__ENST00000582161.5_1_17:21030238-21081576:+|nuORF	75.04331003522576	0.23611669241777622	6				NaN	NaN	0	NaN	6988	3205	10189
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10196	28.216	NaN	11375	30	0	976.75	0.142	+			11022	FEKIHQETF	9	81	589.7945997959959	1177.5746466587916	2	589.7965087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FEKIHQETF_	ENSG00000189091|ENST00000302516|SF3B3;nc|ENSG00000189091|Q15393-2|SF3B3	102.95473732560676	0.036186905769664095	6				NaN	NaN	0	NaN	6989	3205	10189
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10214	28.254	NaN	63182	30	0	6746.4	0.214			+	25700	LRKWLCFT	8	109	533.796782488448	1065.579012043696	2	533.7985229492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LRKWLCFT_	REV__ENSG00000135976|ENST00000420699|ANKRD36;REV__ENSG00000196912|ENST00000359901|ANKRD36B;REV__ENST00000421946.2_1_2:97879127-97913404:+|nuORF;REV__nc|ENSG00000135976|A6QL64-3|ANKRD36;REV__nc|ENSG00000196912|Q8N2N9-2|ANKRD36B;REV__nc|ENSG00000196912|Q8N2N9-3|ANKRD36B	79.9392285194092	0.32408006123154964	6				NaN	NaN	0	NaN	7004	3208	10213
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10215	28.258	NaN	29307	30	0	4262.3	0.106			+	21427	KMYGGDTSSI	10	83	529.7476734663795	NaN	0	529.7476196289062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KMYGGDTSSI_	REV__ENSG00000255274|ENST00000689828|SMIM35	79.71258880314673	0.10087619412066733	6				NaN	NaN	0	NaN	7005	3208	10213
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10216	28.26	NaN	22618	30	0	2784	0.106			+	26582	LTTRSPWL	8	85	487.2759765714556	972.5374002097112	2	487.27685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LTTRSPWL_	REV__ENST00000355680.7_1_21:48056840-48064227:+|nuORF;REV__ENST00000482508.5_1_21:48063432-48064227:+|nuORF	58.78195531508484	0.5138399468736706	6				NaN	NaN	0	NaN	7006	3208	10213
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10217	28.262	NaN	19050	30	0	2295.4	0.106				-1	 	0	77	496.7829898999698	991.5514268667396	2	496.7844543457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7007	3208	10213
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10218	28.264	NaN	37062	30	0	8669.4	0.106			+	24715	LHLCLWRW	8	102	563.8021152513643	1125.5896775695285	2	563.8040771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LHLCLWRW_	REV__ENST00000432874.7_2_1:38184128-38186086:-|nuORF	54.76467175910256	0.5536104764165384	6				NaN	NaN	0	NaN	7008	3208	10213
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10219	28.265	NaN	12647	30	0	1509.4	0.033				-1	 	0	95	444.2493941391856	886.4842353451712	2	444.2506408691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7009	3208	10213
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10220	28.266	NaN	7665.6	30	0	1943.5	0.137			+	18141	ILKGEKDPQ	9	64	343.19766570240824	NaN	0	343.1988525390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ILKGEKDPQ_	REV__ENSG00000025293|ENST00000374012|PHF20;REV__nc|ENSG00000025293|Q9BVI0-2|PHF20;REV__PHF20|p.L826Cfs*62|1|0.3|ENSG00000025293|chr20:35938869-35938869|C/-|frameshift_variant	24.519189625965996	0.35377483217337163	6				NaN	NaN	0	NaN	7010	3208	10213
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10238	28.304	NaN	146100	30	0	12054	0.212			+	42683	TCKQKMIQEL	10	99	647.8280289544458	1293.6415049756915	2	647.829833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_TC(Carbamidomethyl (C))KQKM(Oxidation (M))IQEL_	REV__ENSG00000136603|ENST00000259119|SKIL;REV__nc|ENSG00000136603|P12757-3|SKIL;REV__nc|ENSG00000136603|P12757-5|SKIL;REV__SKIL|p.C617Y|1|0.18|ENSG00000136603|chr3:170391214-170391214|G/A|missense_variant	134.7655990226056	0.012149689860786373	6				NaN	NaN	0	NaN	7025	3211	10237
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10239	28.308	NaN	50964	30	0	7631.9	0.106				-1	 	0	91	524.246805033204	1046.479057133208	2	524.2485961914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7026	3211	10237
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10240	28.31	NaN	60932	30	0	32535	0.106				-1	 	0	83	492.25988652663005	982.5052201200601	2	492.2612609863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7027	3211	10237
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10241	28.311	NaN	24619	30	0	8795	0.106			+	-1	WELDKTCDD	9	71	591.2415985816141	1180.468644230028	2	591.2437744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_WELDKTC(Carbamidomethyl (C))DD_	REV__ENST00000457422.6_1_17:42755944-42756196:-|nuORF	23.04248740728303	0.5879033540491928	6				NaN	NaN	0	NaN	7028	3211	10237
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10242	28.313	NaN	48260	30	0	4983.6	0.106	+			26355	LTASLFTHS	9	106	488.7584725327741	975.5023921323482	2	488.7600402832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LTASLFTHS_	ENSG00000125740|ENST00000353609|FOSB;ENST00000587358.1_1_19:45974364-45976267:+|nuORF;nc|ENSG00000125740|P53539-10|FOSB;nc|ENSG00000125740|P53539-2|FOSB;nc|ENSG00000125740|P53539-3|FOSB;nc|ENSG00000125740|P53539-5|FOSB;nc|ENSG00000125740|P53539-8|FOSB	71.29570347882199	0.13518600952103718	6				NaN	NaN	0	NaN	7029	3211	10237
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10243	28.315	NaN	11532	30	0	1081.4	0.034				-1	 	0	75	468.25418729572823	934.4938216582565	2	468.2555847167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7030	3211	10237
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10244	28.316	NaN	14312	30	0	2176.5	0.14	+			11699	FRSIKQSM	8	77	498.76844283080067	995.5223327284014	2	498.7699279785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FRSIKQSM_	ENSG00000183484|ENST00000329797|GPR132;nc|ENSG00000183484|Q9UNW8-2|GPR132;nc|ENSG00000183484|Q9UNW8-3|GPR132	68.78682469695295	0.41700713582915416	6				NaN	NaN	0	NaN	7031	3211	10237
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10262	28.353	NaN	261100	30	0	58445	0.153			+	-1	SFILPCSPSL	10	85	374.1950499215266	1119.5633203647799	3	374.19635009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_SFILPC(Carbamidomethyl (C))SPSL_	REV__ENSG00000181666|ENST00000392153|ZNF875;REV__nc|ENSG00000181666|P10072|ZNF875	47.95952297671804	0.47580206326914537	6				NaN	NaN	0	NaN	7046	3214	10261
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10263	28.356	NaN	55867	30	0	6724.3	0.106	+			11028	FEKKYVATL	9	96	549.8121680298603	1097.6097831265206	2	549.8136596679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FEKKYVATL_	ENSG00000132341|ENST00000543796|RAN	136.98908636845044	0.011892605960677736	6				NaN	NaN	0	NaN	7047	3214	10261
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10264	28.358	NaN	39688	30	0	10359	0.106	+			11029	FEKKYVATL	9	85	366.8771647500579	1097.6096648503737	3	366.8780212402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FEKKYVATL_	ENSG00000132341|ENST00000543796|RAN	52.936696900407355	0.27249468807391813	6				NaN	NaN	0	NaN	7048	3214	10261
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10265	28.36	NaN	26979	30	0	8176	0.106			+	-1	SMMLRRLEL	9	95	397.5509893068297	NaN	0	397.551025390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SMMLRRLEL_	REV__ENST00000373116.5_1_1:36926896-36929794:-|nuORF	47.95952297671804	0.22075498469600283	6				NaN	NaN	0	NaN	7049	3214	10261
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10266	28.362	NaN	13284	30	0	4267.5	0.106	+			11683	FRCGWVTF	8	78	508.24438909990073	1014.4742252666015	2	508.2456359863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FRCGWVTF_	SRRT|p.R464C|1|0.08|ENSG00000087087|chr7:100885873-100885873|C/T|missense_variant	53.351449002276354	0.5676011784961348	6				NaN	NaN	0	NaN	7050	3214	10261
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10267	28.363	NaN	17952	30	0	3697.6	0.106			+	50507	YANKQRSSV	9	86	526.7783359775613	1051.5421190219224	2	526.7798461914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YANKQRSSV_	REV__ENSG00000169762|ENST00000405303|TAPT1;REV__nc|ENSG00000169762|Q6NXT6-2|TAPT1;REV__TAPT1|p.K545Nfs*10|1|0.09|ENSG00000169762|chr4:16163377-16163377|T/-|frameshift_variant	38.80614096846853	0.43426287593479557	6				NaN	NaN	0	NaN	7051	3214	10261
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10268	28.365	NaN	12458	30	0	1584.8	0.039	+			43677	TKDSEFPIDMQ	11	84	663.7978807779282	1325.5812086226563	2	663.7996826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_TKDSEFPIDM(Oxidation (M))Q_	ENSG00000144451|ENST00000331683|SPAG16;ENST00000452556.5_1_2:214162070-215102915:+|nuORF;nc|ENSG00000144451|Q8N0X2-2|SPAG16;SPAG16|p.F348Lfs*8|1|0.2|ENSG00000144451|chr2:213490060-213490060|T/-|frameshift_variant	63.42647028704847	0.292869158926425	6				NaN	NaN	0	NaN	7052	3214	10261
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10286	28.403	NaN	25246	30	0	16085	0.214				-1	 	0	65	463.7913044434305	925.568055953661	2	463.7924499511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7067	3217	10285
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10287	28.406	NaN	17123	30	0	1341.3	0.106				-1	CCRKIKDTV	9	88	561.7916352771351	1121.5687176210702	2	561.7935180664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_C(Carbamidomethyl (C))CRKIKDTV_	ENSG00000145916|ENST00000313386|RMND5B;ENST00000507575.5_1_5:177558043-177570729:+|nuORF;ENST00000513162.5_1_5:177569546-177570729:+|nuORF;ENST00000515360.5_1_5:177569546-177575030:+|nuORF;nc|ENSG00000145916|Q96G75-2|RMND5B;RMND5B|p.Y129Lfs*138|1|0.21|ENSG00000145916|chr5:178142950-178142951|-/T|frameshift_variant	27.882242232435846	0.5426732730940306	6				NaN	NaN	0	NaN	7068	3217	10285
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10288	28.408	NaN	22595	30	0	2267.1	0.106	+			9425	EKKASHQHQ	9	89	546.7784501074105	1091.542347281621	2	547.280029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EKKASHQHQ_	ENSG00000174450|ENST00000567107|GOLGA6L2;nc|ENSG00000174450|Q8N9W4-1|GOLGA6L2;nc|ENSG00000174450|Q8N9W4-2|GOLGA6L2	56.72105179125745	0.24094814563026265	6				NaN	NaN	0	NaN	7069	3217	10285
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10289	28.41	NaN	9238.3	30	0	1717.1	0.106	+			8988	EFQNLCEKR	9	79	583.7850507371921	1165.5555485411842	2	583.7882080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EFQNLCEKR_	ENSG00000186976|ENST00000262726|EFCAB6;nc|ENSG00000186976|Q5THR3-2|EFCAB6;nc|ENSG00000186976|Q5THR3-5|EFCAB6	72.87924865735499	0.12833875048249987	6				NaN	NaN	0	NaN	7070	3217	10285
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10290	28.412	NaN	34768	30	0	9664.2	0.106			+	51126	YNEGLLQK	8	89	482.75880330795763	963.5030536827153	2	482.7599182128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YNEGLLQK_	REV__ENSG00000185313|ENST00000449082|SCN10A;REV__SCN10A|p.E906Rfs*2|1|0.13|ENSG00000185313|chr3:38726977-38726977|C/-|frameshift_variant;REV__SCN10A|p.F1805Lfs*8|1|0.1|ENSG00000185313|chr3:38697805-38697805|A/-|frameshift_variant	116.90359126533652	0.23898233959989007	6				NaN	NaN	0	NaN	7071	3217	10285
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10291	28.414	NaN	7925.5	30	0	990.48	0.033				-1	 	0	62	426.7129890432941	851.4114251533882	2	426.7138977050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7072	3217	10285
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10292	28.414	NaN	16704	30	0	3202.1	0.138			+	13566	GLSYDRSI	8	81	455.73489312491176	NaN	0	455.7348937988281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GLSYDRSI_	REV__ENSG00000155229|ENST00000438925|MMS19;REV__nc|ENSG00000155229|Q96T76-5|MMS19;REV__nc|ENSG00000155229|Q96T76-7|MMS19;REV__nc|ENSG00000155229|Q96T76-8|MMS19	65.80317337860623	1.7418937515398478	6				NaN	NaN	0	NaN	7073	3217	10285
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10310	28.454	NaN	20495	30	0	11187	0.214				-1	 	0	74	493.77786816448025	985.5411833957605	2	493.779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7088	3220	10309
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10311	28.457	NaN	61225	30	0	8767.8	0.106			+	-1	VMLATWGL	8	108	453.74124802594457	905.4679431186892	2	453.74249267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_VM(Oxidation (M))LATWGL_	REV__CLPB|p.H164R|1|0.28|ENSG00000162129|chr11:72403017-72403017|T/C|missense_variant;REV__CLPB|p.L339Wfs*5|1|0.11|ENSG00000162129|chr11:72317169-72317169|G/-|frameshift_variant;REV__ENSG00000162129|ENST00000538039|CLPB;REV__ENST00000445069.4_1_11:72065347-72145518:-|nuORF;REV__nc|ENSG00000162129|Q9H078-4|CLPB;REV__nc|ENSG00000162129|Q9H078|CLPB	90.93900077235594	0.2746275503875687	6				NaN	NaN	0	NaN	7089	3220	10309
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10312	28.459	NaN	20263	30	0	2505.4	0.106			+	38681	SSIVLTTYF	9	91	515.7780914380372	1029.5416299428744	2	515.7796630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSIVLTTYF_	REV__OR52K2|p.V257L|1|0.24|ENSG00000181963|chr11:4450108-4450108|G/T|missense_variant	58.78195531508484	0.22376836668196862	6				NaN	NaN	0	NaN	7090	3220	10309
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10313	28.461	NaN	12298	30	0	1037.1	0.106				-1	 	0	76	530.2729796627203	529.2657031961203	1	530.2789306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7091	3220	10309
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10314	28.463	NaN	7436.3	30	0	812.71	0.106	+			42846	TEFAKQTSL	9	75	512.7673697474207	1023.5201865616415	2	512.7691040039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TEFAKQTSL_	ENSG00000100324|ENST00000216160|TAB1;nc|ENSG00000100324|Q15750-2|TAB1;TAB1|p.T433Pfs*9|2|0.37|ENSG00000100324|chr22:39428168-39428168|C/-|frameshift_variant	91.26522074875469	0.06129826844580791	6				NaN	NaN	0	NaN	7092	3220	10309
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10315	28.465	NaN	29696	30	0	2935.9	0.037			+	38294	SQSSHKELFI	10	93	588.3064899899982	1174.5984270467964	2	588.8096313476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SQSSHKELFI_	REV__ENSG00000217128|ENST00000510461|FNIP1;REV__FNIP1|p.I925Nfs*6|1|0.21|ENSG00000217128|chr5:131671670-131671671|-/T|frameshift_variant;REV__FNIP1|p.K732Nfs*23|1|0.16|ENSG00000217128|chr5:131672248-131672248|T/-|frameshift_variant;REV__FNIP1|p.N877Kfs*2|1|0.45|ENSG00000217128|chr5:131671813-131671814|-/T|frameshift_variant;REV__FNIP1|p.P733Tfs*4|1|0.29|ENSG00000217128|chr5:131672247-131672248|-/T|frameshift_variant;REV__nc|ENSG00000217128|Q8TF40-2|FNIP1;REV__nc|ENSG00000217128|Q8TF40-3|FNIP1	104.42354056486148	0.06456012287859861	6				NaN	NaN	0	NaN	7093	3220	10309
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10316	28.465	NaN	9418.9	30	0	1502.1	0.143	+			35270	SALPNPPALK	10	79	336.5344378546052	NaN	0	336.5342712402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SALPNPPALK_	CUX1|p.E933Sfs*59|1|0.14|ENSG00000257923|chr7:102202089-102202089|C/-|frameshift_variant;CUX1|p.I1081Sfs*39|2|0.46|ENSG00000257923|chr7:102227471-102227471|C/-|frameshift_variant;ENSG00000257923|ENST00000292535|CUX1;nc|ENSG00000257923|P39880-2|CUX1;nc|ENSG00000257923|P39880-3|CUX1;nc|ENSG00000257923|P39880-4|CUX1;nc|ENSG00000257923|P39880-5|CUX1;nc|ENSG00000257923|P39880-6|CUX1	20.94693142431847	0.4201028297492154	6				NaN	NaN	0	NaN	7094	3220	10309
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10334	28.505	NaN	530160	30	0	74973	0.143	+			3800	ATAGIIGVNR	10	100	486.284535484834	970.554518036468	2	486.2850341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATAGIIGVNR_	CLTC-CEP95|1|fusion;CLTC|p.A1374*|1|0.05|ENSG00000141367|chr17:59683464-59683465|-/TA|frameshift_variant;CLTC|p.D632Yfs*7|1|0.15|ENSG00000141367|chr17:59666589-59666590|-/TTACA|frameshift_variant;ENSG00000141367|ENST00000269122|CLTC;ENST00000472129.3_1_17:57725612-57733400:+|nuORF;nc|ENSG00000141367|Q00610-2|CLTC	172.24860141594272	0.0029705495262254346	6				NaN	NaN	0	NaN	7109	3223	10333
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10335	28.507	NaN	27257	30	0	1787.5	0.106	+			43043	TELAMRQSV	9	93	517.7677263896379	1033.5208998460757	2	517.7686157226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TELAMRQSV_	CON__P05784;ENSG00000111057|ENST00000388835|KRT18;ENST00000396959.2_1_3:12829511-12830132:-|nuORF;ENST00000424695.1_1_1:238654935-238655424:+|nuORF;ENST00000427733.1_1_13:90882929-90883235:+|nuORF;ENST00000549078.5_1_12:53344429-53346127:+|nuORF	146.78539889680295	0.007618400906539062	6				NaN	NaN	0	NaN	7110	3223	10333
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10336	28.509	NaN	23744	30	0	14192	0.106	+			9469	EKQKESWQL	9	67	392.53960725878835	1174.5969923765651	3	392.541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EKQKESWQL_	ENSG00000153107|ENST00000341068|ANAPC1;ENST00000426186.1_3_2:87098444-87121919:+|nuORF;ENST00000489177.1_1_2:112630836-112638411:-|nuORF	33.921630207806714	0.48623198279849766	6				NaN	NaN	0	NaN	7111	3223	10333
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10337	28.511	NaN	11488	30	0	4254.8	0.106	+			46682	VGGVGVGL	8	79	329.2005596010969	656.3865662689939	2	329.201416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VGGVGVGL_	ENST00000497139.5_1_6:43745967-43746111:+|nuORF	10.184766708764876	0.7843118145031319	6				NaN	NaN	0	NaN	7112	3223	10333
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10338	28.513	NaN	12649	30	0	627.77	0.106				-1	 	0	92	605.8596008322859	1209.7046487313717	2	605.8612060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7113	3223	10333
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10339	28.515	NaN	53179	30	0	19983	0.106			+	30291	PTKRLETQSK	10	70	396.5631029419697	1186.6674794261091	3	396.56414794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PTKRLETQSK_	REV__ENSG00000116698|ENST00000688051|SMG7;REV__nc|ENSG00000116698|Q92540-2|SMG7;REV__nc|ENSG00000116698|Q92540-4|SMG7;REV__nc|ENSG00000116698|Q92540-5|SMG7;REV__nc|ENSG00000116698|Q92540|SMG7;REV__SMG7|p.M849*|1|0.31|ENSG00000116698|chr1:183546132-183546132|A/-|frameshift_variant	56.632244143249146	0.3964695498866976	6				NaN	NaN	0	NaN	7114	3223	10333
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10340	28.517	NaN	15067	30	0	974.34	0.036	+			5972	AVLNNRFIK	9	91	537.8230854985537	1073.6316180639074	2	537.824462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AVLNNRFIK_	ENSG00000139746|ENST00000438737|RBM26;nc|ENSG00000139746|Q5T8P6-2|RBM26;nc|ENSG00000139746|Q5T8P6-3|RBM26;nc|ENSG00000139746|Q5T8P6-4|RBM26;nc|ENSG00000139746|Q5T8P6-5|RBM26;RBM26|p.N783Ifs*5|1|0.11|ENSG00000139746|chr13:79342743-79342743|T/-|frameshift_variant	44.377184641726394	0.36891676396732553	6				NaN	NaN	0	NaN	7115	3223	10333
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10358	28.551	NaN	145030	30	0	91656	0.214			+	-1	VYIFVGVCL	9	98	357.19670365947945	1068.5682815786383	3	357.1978454589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_VYIFVGVC(Carbamidomethyl (C))L_	REV__ENSG00000197586|ENST00000376652|ENTPD6;REV__nc|ENSG00000197586|O75354-2|ENTPD6;REV__nc|ENSG00000197586|O75354-3|ENTPD6	37.15910966729921	0.4535818937225704	6				NaN	NaN	0	NaN	7130	3226	10357
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10359	28.555	NaN	20151	30	0	2122.7	0.106	+			41571	SVQEYFVRK	9	87	578.3103230380677	1154.6060931429354	2	578.3123779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVQEYFVRK_	ENSG00000163781|ENST00000260810|TOPBP1;TOPBP1|p.K1266Nfs*10|1|0.13|ENSG00000163781|chr3:133616887-133616887|T/-|frameshift_variant;TOPBP1|p.R1378Sfs*18|1|0.04|ENSG00000163781|chr3:133611043-133611044|-/AAAAGAGAATGTG|frameshift_variant;TOPBP1|p.R964Efs*12|1|0.19|ENSG00000163781|chr3:133624090-133624090|T/-|frameshift_variant	162.63603312974413	0.004023911058767669	6				NaN	NaN	0	NaN	7131	3226	10357
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10360	28.557	NaN	37087	30	0	4082	0.106	+			30129	PRRPPAGAR	9	103	489.2912460416564	976.5679391501128	2	489.2926025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PRRPPAGAR_	ENST00000446816.1_1_2:96874348-96906424:+|nuORF	53.351449002276354	0.2690372970092375	6				NaN	NaN	0	NaN	7132	3226	10357
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10361	28.558	NaN	30783	30	0	6738.6	0.106			+	1699	AGVFPLDGILP	11	84	366.8771647500579	1097.6096648503737	3	367.2135009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AGVFPLDGILP_	REV__ENSG00000139641|ENST00000394048|ESYT1;REV__nc|ENSG00000139641|Q9BSJ8-2|ESYT1	29.550750289552195	0.6798279264880025	6				NaN	NaN	0	NaN	7133	3226	10357
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10362	28.56	NaN	22881	30	0	3159	0.106	+			31597	QLTQKTSVPP	10	81	549.8121680298603	1097.6097831265206	2	550.3175659179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QLTQKTSVPP_	ENSG00000180182|ENST00000324817|MED14	63.53385203322761	0.33370026130094593	6				NaN	NaN	0	NaN	7134	3226	10357
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10363	28.562	NaN	12739	30	0	3590.2	0.106	+			14612	GTGFRRKR	8	53	326.5298183394235	976.5676256184706	3	326.53094482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTGFRRKR_	ENST00000564288.5_2_1:39670752-39696910:+|nuORF	28.2542754592877	0.7411748056684583	6				NaN	NaN	0	NaN	7135	3226	10357
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10364	28.564	NaN	22244	30	0	4157.6	0.035			+	11680	FRAAALPMH	9	80	507.27079789488704	1012.5270428565741	2	507.2724914550781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FRAAALPMH_	REV__ENSG00000176473|ENST00000402312|WDR25;REV__WDR25|p.A124V|1|0.36|ENSG00000176473|chr14:100381295-100381295|C/T|missense_variant;REV__WDR25|p.H424Pfs*45|1|0.16|ENSG00000176473|chr14:100526032-100526033|-/T|frameshift_variant	32.81241826257853	0.4965981579233955	6				NaN	NaN	0	NaN	7136	3226	10357
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10382	28.601	NaN	29656	30	0	3983.6	0.214				-1	 	0	80	404.22593365392953	806.4373143746591	2	404.2273254394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7151	3229	10381
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10383	28.605	NaN	27540	30	0	1925.7	0.106				-1	 	0	84	494.80413664606857	987.5937203589372	2	494.8056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7152	3229	10381
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10384	28.607	NaN	29902	30	0	2617.7	0.106				-1	 	0	90	488.73911837218174	975.4636838111635	2	488.7403564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7153	3229	10381
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10385	28.609	NaN	23696	30	0	5731.4	0.106			+	13642	GMMLSFIL	8	67	456.24037061471523	910.4661882962305	2	456.24188232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GMMLSFIL_	REV__MANEA|p.F18L|1|0.2|ENSG00000172469|chr6:95586493-95586493|T/G|missense_variant	46.76643321282427	0.6143254112625767	6				NaN	NaN	0	NaN	7154	3229	10381
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10386	28.611	NaN	12114	30	0	1737.9	0.106	+			49213	VVMVNQGLTK	10	86	544.808601570055	1087.6026502069099	2	544.8109741210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVMVNQGLTK_	ENSG00000134057|ENST00000256442|CCNB1	144.76815839617436	0.009482796195788205	6				NaN	NaN	0	NaN	7155	3229	10381
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10387	28.612	NaN	13177	30	0	4086.3	0.034				-1	LCGGALWY	8	74	470.22316300499784	938.4317730767957	2	470.2245178222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_LC(Carbamidomethyl (C))GGALWY_	ENST00000477088.5_1_9:131798906-131802811:+|nuORF	54.89457262308372	0.5523244765420926	6				NaN	NaN	0	NaN	7156	3229	10381
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10388	28.613	NaN	38669	30	0	11345	0.138	+			25354	LPFAARAL	8	95	429.7637598489528	857.5129667647057	2	429.7651672363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LPFAARAL_	ENST00000312916.11_1_5:76326323-76326545:+|nuORF	29.841539824830324	0.7289191502596711	6				NaN	NaN	0	NaN	7157	3229	10381
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10406	28.651	NaN	66067	30	0	10898	0.214	+			39029	SSSLALEDY	9	93	492.7303801385543	983.4462073439087	2	492.7317810058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSSLALEDY_	ENSG00000131379|ENST00000253697|C3orf20;nc|nan|Q8ND61-2|C3orf20	94.00642277110589	0.05356993013874309	6				NaN	NaN	0	NaN	7172	3232	10405
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10407	28.655	NaN	34379	30	0	4442.6	0.098	+			44893	TTWPKLRL	8	93	507.80833645808406	1013.6021199829681	2	507.8097839355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TTWPKLRL_	ENSG00000198722|ENST00000635942|UNC13B	60.97194046774394	0.49215940876911696	6				NaN	NaN	0	NaN	7173	3232	10405
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10408	28.657	NaN	32075	30	0	2410.1	0.106	+			33993	RSGNLRDR	8	99	487.2678018247638	972.5210507163276	2	487.26885986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RSGNLRDR_	ENSG00000117791|ENST00000366913|MTARC2;ENSG00000186205|ENST00000366910|MTARC1;nc|ENSG00000117791|Q969Z3-2|MTARC2;nc|ENSG00000186205|Q5VT66-2|MTARC1	45.02220120713402	0.6251487313365616	6				NaN	NaN	0	NaN	7174	3232	10405
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10409	28.659	NaN	14058	30	0	1001.4	0.106			+	10224	ETHIRQHAT	9	92	546.7784501074105	1091.542347281621	2	546.7828369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ETHIRQHAT_	REV__ENSG00000274349|ENST00000621410|ZNF658;REV__nc|ENSG00000274349|Q5TYW1-2|ZNF658;REV__ZNF658|p.F1031Cfs*3|1|0.41|ENSG00000274349|chr9:66920656-66920657|TT/-|frameshift_variant	60.11826168202944	0.21262886028301267	6				NaN	NaN	0	NaN	7175	3232	10405
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10410	28.66	NaN	14535	30	0	1054.9	0.106	+			38664	SSIQGQWPK	9	82	515.770120084743	NaN	0	515.7701416015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSIQGQWPK_	ARID4B|p.T939Rfs*2|2|0.22|ENSG00000054267|chr1:235182104-235182104|T/-|frameshift_variant;ENSG00000054267|ENST00000264183|ARID4B;ENST00000491632.5_1_1:235341091-235490234:-|nuORF;nc|ENSG00000054267|Q4LE39-2|ARID4B;nc|ENSG00000054267|Q4LE39-3|ARID4B;nc|ENSG00000054267|Q4LE39-4|ARID4B	54.722347961057174	0.17414871455573902	6				NaN	NaN	0	NaN	7176	3232	10405
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10411	28.662	NaN	14934	30	0	4883.4	0.037	+			23324	KYRSTKIQI	9	86	379.5645469714882	1135.6718115146646	3	379.56561279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KYRSTKIQI_	DMXL2|p.S2492Qfs*21|1|0.29|ENSG00000104093|chr15:51466227-51466227|A/-|frameshift_variant	56.43379154798735	0.2433427591689151	6				NaN	NaN	0	NaN	7177	3232	10405
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10412	28.663	NaN	12436	30	0	1500.4	0.139				-1	PHGMRPQL	8	77	476.2478940886548	NaN	0	476.2478332519531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_PHGM(Oxidation (M))RPQL_	ENSG00000100359|ENST00000248929|SGSM3;ENST00000478085.5_1_22:40800171-40802852:+|nuORF;nc|ENSG00000100359|Q96HU1-2|SGSM3;SGSM3|p.T283Rfs*42|1|0.12|ENSG00000100359|chr22:40406111-40406111|C/-|frameshift_variant	44.53106598305862	1.7418937515398478	6				NaN	NaN	0	NaN	7178	3232	10405
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10430	28.701	NaN	34885	30	0	5263.5	0.214			+	33395	RIATVWCT	8	88	503.7607461652445	1005.506939397289	2	503.7622985839844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_RIATVWC(Carbamidomethyl (C))T_	REV__ENSG00000115290|ENST00000263915|GRB14;REV__GRB14|p.E402Rfs*18|1|0.29|ENSG00000115290|chr2:164497391-164497392|-/T|frameshift_variant;REV__nc|ENSG00000115290|Q14449-2|GRB14	60.97194046774394	0.49215940876911696	6				NaN	NaN	0	NaN	7193	3235	10429
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10431	28.704	NaN	50336	30	0	4936.2	0.106	+			25321	LPAREATQF	9	103	516.7768666951926	1031.539180457185	2	516.7772216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LPAREATQF_	ENSG00000183087|ENST00000327773|GAS6;ENST00000476291.1_1_13:114550749-114566917:-|nuORF;GAS6|p.G150Afs*49|1|0.17|ENSG00000183087|chr13:113839745-113839745|C/-|frameshift_variant;GAS6|p.N106Kfs*13|1|0.39|ENSG00000183087|chr13:113846552-113846553|-/T|frameshift_variant;GAS6|p.R151Pfs*27|1|0.41|ENSG00000183087|chr13:113839744-113839745|-/C|frameshift_variant;nc|ENSG00000183087|Q14393-1|GAS6	83.6470233535746	0.08277643980271215	6				NaN	NaN	0	NaN	7194	3235	10429
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10432	28.706	NaN	34793	30	0	5539.4	0.106	+			7423	DERANLPEI	9	89	528.7684665203459	1055.5223801074917	2	528.7702026367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DERANLPEI_	ENST00000587908.1_1_19:56832840-56833431:-|nuORF	125.81401957644128	0.01768009863045738	6				NaN	NaN	0	NaN	7195	3235	10429
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10433	28.708	NaN	10076	30	0	3623.2	0.106	+			4917	ATQLLKLAH	9	61	332.2051730697778	993.5936898095334	3	332.2063293457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATQLLKLAH_	ENSG00000148303|ENST00000323345|RPL7A;ENST00000424559.2_1_22:19780074-19780431:+|nuORF;ENST00000434317.1_1_7:102395625-102396051:+|nuORF;ENST00000437848.1_1_1:46117146-46117242:-|nuORF;ENST00000463740.5_1_9:136215098-136217195:+|nuORF;ENST00000468834.1_1_10:33346560-33347304:-|nuORF;ENST00000473054.1_1_14:68805457-68806021:-|nuORF;ENST00000485706.5_1_9:136216467-136216912:+|nuORF;ENST00000486157.1_1_5:78825151-78825526:+|nuORF	36.446750945000026	0.4619375763483977	6				NaN	NaN	0	NaN	7196	3235	10429
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10434	28.71	NaN	49958	30	0	14616	0.106	+			26553	LTSHSQVVTAL	11	106	385.88386114828404	1154.629754045052	3	385.8851318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LTSHSQVVTAL_	ENST00000564176.5_1_16:31487200-31487686:+|nuORF	37.59989570853033	0.5907838038483115	6				NaN	NaN	0	NaN	7197	3235	10429
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10435	28.712	NaN	15301	30	0	2834.2	0.036				-1	LMSYVNRY	8	92	531.2594050143572	NaN	0	531.2593994140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_LM(Oxidation (M))SYVNRY_	ENSG00000132549|ENST00000357162|VPS13B;nc|ENSG00000132549|Q7Z7G8-3|VPS13B;nc|ENSG00000132549|Q7Z7G8-4|VPS13B;nc|ENSG00000132549|Q7Z7G8-5|VPS13B;nc|ENSG00000132549|Q7Z7G8-6|VPS13B;nc|ENSG00000132549|Q7Z7G8|VPS13B;VPS13B|p.I1913*|1|0.3|ENSG00000132549|chr8:99642246-99642246|A/-|frameshift_variant;VPS13B|p.L515Nfs*12|1|0.06|ENSG00000132549|chr8:99135711-99135712|-/AAATGGGAAGAAAAAC|frameshift_variant;VPS13B|p.L58*|1|0.2|ENSG00000132549|chr8:99038443-99038443|T/-|frameshift_variant;VPS13B|p.M3156Ifs*2|1|0.07|ENSG00000132549|chr8:99832427-99832428|-/TA|frameshift_variant;VPS13B|p.S3988Lfs*4|1|0.55|ENSG00000132549|chr8:99875552-99875553|-/C|frameshift_variant;VPS13B|p.S3988Pfs*25|1|0.11|ENSG00000132549|chr8:99875553-99875553|C/-|frameshift_variant	123.9887779854562	1.7418937515398478	6				NaN	NaN	0	NaN	7198	3235	10429
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10436	28.712	NaN	8592.4	30	0	1005.9	0.139				-1	 	0	69	433.7569833148032	865.4994136964065	2	433.7582702636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7199	3235	10429
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10454	28.752	NaN	26792	30	0	3127.6	0.214	+			27260	METLPYLQ	8	87	497.7503325512791	993.4861121693582	2	497.7513732910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_METLPYLQ_	nc|ENSG00000204463|P46379|BAG6	47.657333605630114	0.6087971902037268	6				NaN	NaN	0	NaN	7214	3238	10453
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10455	28.755	NaN	33160	30	0	4487.4	0.106				-1	 	0	96	558.3047265213938	1114.5949001095876	2	558.306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7215	3238	10453
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10456	28.757	NaN	19598	30	0	7109.2	0.106				-1	 	0	87	601.3106362262826	1200.606719519365	2	601.3125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7216	3238	10453
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10457	28.759	NaN	14324	30	0	4324.3	0.106	+			17487	ICWKNLSI	8	81	488.7676812295618	975.5208095259236	2	488.7688903808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ICWKNLSI_	ENSG00000196187|ENST00000366835|TMEM63A	65.80317337860623	0.44433089765398776	6				NaN	NaN	0	NaN	7217	3238	10453
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10458	28.761	NaN	20752	30	0	11268	0.106			+	13328	GKMKEYLL	8	68	491.2762683532219	980.5379837732438	2	491.27801513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GKMKEYLL_	REV__ENSG00000166922|ENST00000300175|SCG5;REV__ENST00000475752.1_1_15:32976717-32988807:+|nuORF;REV__ENST00000498069.5_1_15:32969893-32988807:+|nuORF;REV__ENST00000498607.2_1_15:32976717-32984099:+|nuORF;REV__nc|ENSG00000166922|P05408-2|SCG5	30.503639358989545	0.7238069182250283	6				NaN	NaN	0	NaN	7218	3238	10453
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10459	28.763	NaN	27924	30	0	3598.5	0.037	+			10321	ETRRRGLGSP	10	83	564.8147255733317	1127.6148982134632	2	564.8169555664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ETRRRGLGSP_	ENST00000550376.5_1_12:108154376-108155011:-|nuORF	74.25504064058377	0.24255678544297835	6				NaN	NaN	0	NaN	7219	3238	10453
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10460	28.763	NaN	30075	30	0	4087.6	0.14	+			736	AEAYLGKTV	9	87	476.26012347743654	950.5056940216731	2	476.7635192871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AEAYLGKTV_	ENSG00000109971|ENST00000534624|HSPA8;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;ENST00000456928.2_1_12:4206979-4207195:+|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;HSPA8|p.K569Dfs*6|1|0.3|ENSG00000109971|chr11:123058302-123058303|TC/-|frameshift_variant;nc|ENSG00000109971|P11142-2|HSPA8	104.01359247289065	0.03510646158778409	6				NaN	NaN	0	NaN	7220	3238	10453
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10478	28.803	NaN	44833	30	0	5512.9	0.214	+			737	AEAYLGKTV	9	97	476.26012347743654	950.5056940216731	2	476.2607727050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEAYLGKTV_	ENSG00000109971|ENST00000534624|HSPA8;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;ENST00000456928.2_1_12:4206979-4207195:+|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;HSPA8|p.K569Dfs*6|1|0.3|ENSG00000109971|chr11:123058302-123058303|TC/-|frameshift_variant;nc|ENSG00000109971|P11142-2|HSPA8	109.43880257439609	0.029570636687953285	6				NaN	NaN	0	NaN	7235	3241	10477
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10479	28.806	NaN	30146	30	0	8279.5	0.106	+			44983	TVCYAKHF	8	89	484.7365245555997	967.4584961779995	2	484.737548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVCYAKHF_	ENST00000523102.5_1_12:6980128-6980251:-|nuORF	31.954861631926434	0.7126016770032289	6				NaN	NaN	0	NaN	7236	3241	10477
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10480	28.808	NaN	21192	30	0	1414.9	0.106			+	31161	QGITWYGMF	9	96	551.7547003035434	1101.4948476738866	2	551.7566528320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QGITWYGMF_	REV__ENSG00000102763|ENST00000379310|VWA8;REV__nc|ENSG00000102763|A3KMH1-3|VWA8;REV__VWA8|p.D1438Ifs*16|1|0.27|ENSG00000102763|chr13:41685063-41685063|T/-|frameshift_variant;REV__VWA8|p.G1575Efs*53|1|0.25|ENSG00000102763|chr13:41611729-41611729|C/-|frameshift_variant;REV__VWA8|p.T1319Kfs*27|1|0.09|ENSG00000102763|chr13:41690186-41690186|G/-|frameshift_variant	63.30626980617807	0.18605348971131092	6				NaN	NaN	0	NaN	7237	3241	10477
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10481	28.81	NaN	13896	30	0	1949.6	0.106	+			47888	VSLGTPIMK	9	80	481.2726956043628	NaN	0	481.272705078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_VSLGTPIM(Oxidation (M))K_	ECT2|p.K832Rfs*25|1|0.1|ENSG00000114346|chr3:172815693-172815693|A/-|frameshift_variant;ENSG00000114346|ENST00000392692|ECT2;nc|ENSG00000114346|Q9H8V3-2|ECT2;nc|ENSG00000114346|Q9H8V3-3|ECT2;nc|ENSG00000114346|Q9H8V3-4|ECT2	93.1432384553994	0.0352600271724948	6				NaN	NaN	0	NaN	7238	3241	10477
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10482	28.812	NaN	4542.9	30	0	962.93	0.106				-1	 	0	67	329.2173727630378	656.4201925928757	2	329.2184753417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7239	3241	10477
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10483	28.814	NaN	8351.1	30	0	2092.5	0.031				-1	 	0	62	351.2317585978364	700.4489642624728	2	351.2327880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7240	3241	10477
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10484	28.814	NaN	19349	30	0	3038.4	0.141	+			51117	YMLRNGDIL	9	78	547.7881625277923	1093.5617721223846	2	547.7902221679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YMLRNGDIL_	ENSG00000171914|ENST00000636159|TLN2	79.45101966838831	0.09992237243120712	6				NaN	NaN	0	NaN	7241	3241	10477
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10502	28.854	NaN	162980	30	0	19265	0.196				-1	 	0	104	492.74142098796756	983.4682890427351	2	492.7427062988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7256	3244	10501
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10503	28.857	NaN	32773	30	0	10238	0.106			+	16770	HNGCKMLV	8	89	451.2230394674059	900.4315260016118	2	451.22418212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HNGCKMLV_	REV__MAPK8|p.V80G|1|0.07|ENSG00000107643|chr10:48404968-48404968|T/G|missense_variant	28.2542754592877	0.7411748056684583	6				NaN	NaN	0	NaN	7257	3244	10501
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10504	28.859	NaN	9922.3	30	0	1101.3	0.106				-1	AQGRMCALY	9	86	535.2496654227027	1068.4847779122053	2	535.2515258789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_AQGRMC(Carbamidomethyl (C))ALY_	ENSG00000104518|ENST00000262580|GSDMD;ENST00000524846.5_1_8:144644315-144645071:+|nuORF;ENST00000528475.1_1_8:144644520-144645071:+|nuORF;ENST00000531184.5_1_8:144643499-144645071:+|nuORF	40.5726180659479	0.4135428067754104	6				NaN	NaN	0	NaN	7258	3244	10501
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10505	28.861	NaN	12843	30	0	1782	0.106	+			17079	HRRVGAAQL	9	87	336.5344378546052	NaN	0	336.5349426269531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_HRRVGAAQL_	ENST00000598095.5_1_19:49842746-49843241:+|nuORF	30.503639358989545	0.3235605894931338	6				NaN	NaN	0	NaN	7259	3244	10501
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10506	28.863	NaN	8182.2	30	0	1324.7	0.106				-1	VSSDMLYLM	9	84	537.746592969805	NaN	0	537.7466430664062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_VSSDMLYLM(Oxidation (M))_	ENSG00000127325|ENST00000330891|BEST3;nc|ENSG00000127325|Q8N1M1-5|BEST3;nc|ENSG00000127325|Q8N1M1-6|BEST3	63.30626980617807	0.13521764763214936	6				NaN	NaN	0	NaN	7260	3244	10501
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10507	28.865	NaN	8322.6	30	0	1228	0.106	+			45456	TWVASWPL	8	80	480.25214338737436	958.4897338415487	2	480.2524108886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TWVASWPL_	ENSG00000015520|ENST00000381160|NPC1L1;nc|ENSG00000015520|Q9UHC9-2|NPC1L1;nc|ENSG00000015520|Q9UHC9-3|NPC1L1;nc|ENSG00000015520|Q9UHC9-4|NPC1L1;nc|ENSG00000015520|Q9UHC9|NPC1L1;NPC1L1|p.L475Sfs*35|2|0.12|ENSG00000015520|chr7:44538974-44538974|G/-|frameshift_variant	60.29395666154354	0.49887135096048313	6				NaN	NaN	0	NaN	7261	3244	10501
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10508	28.866	NaN	3911.8	30	0	922.28	0.035				-1	SMIFVILGV	9	45	332.1932596144263	993.557949443479	3	332.1941833496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_SM(Oxidation (M))IFVILGV_	ABCB5|p.C746G|1|0.08|ENSG00000004846|chr7:20699906-20699906|T/G|missense_variant;ENSG00000004846|ENST00000404938|ABCB5;nc|ENSG00000004846|Q2M3G0-1|ABCB5	21.9598887501803	0.5980208138527809	6				NaN	NaN	0	NaN	7262	3244	10501
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10526	28.903	NaN	92154	30	0	11396	0.186			+	10890	FCLSLKEEL	9	95	541.2839915226486	1080.5534301120972	2	541.2857055664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FCLSLKEEL_	REV__ENSG00000171055|ENST00000405912|FEZ2;REV__FEZ2|p.N313Tfs*12|1|0.12|ENSG00000171055|chr2:36558479-36558479|T/-|frameshift_variant;REV__nc|ENSG00000171055|Q9UHY8-2|FEZ2	109.47833844074708	0.029530294723441826	6				NaN	NaN	0	NaN	7277	3247	10525
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10527	28.906	NaN	36332	30	0	8536	0.106	+			41247	SVLGQAMEK	9	90	481.7519982198287	NaN	0	481.75201416015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVLGQAMEK_	CYP51A1|p.L333Wfs*13|1|0.15|ENSG00000001630|chr7:92123208-92123208|A/-|frameshift_variant;ENSG00000001630|ENST00000003100|CYP51A1	114.8945686534367	0.005276929498059453	6				NaN	NaN	0	NaN	7278	3247	10525
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10528	28.908	NaN	16747	30	0	1350	0.106	+			33802	RQKRSQLD	8	85	515.790707913061	1029.566862892922	2	515.7926025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RQKRSQLD_	ENST00000453466.1_1_7:102939135-102952715:+|nuORF	64.20726635412375	0.4601301477144759	6				NaN	NaN	0	NaN	7279	3247	10525
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10529	28.91	NaN	10006	30	0	3433.3	0.106				-1	 	0	62	446.2727963103023	890.5310396874046	2	446.2739562988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7280	3247	10525
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10530	28.912	NaN	10823	30	0	1699.9	0.106				-1	 	0	78	597.2842326374825	596.2769561708825	1	597.2861938476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7281	3247	10525
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10531	28.913	NaN	11925	30	0	1530.7	0.106			+	31258	QHQQRQSL	8	73	512.7674775477421	1023.5204021622843	2	512.7692260742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QHQQRQSL_	REV__ENSG00000137073|ENST00000379238|UBAP2;REV__ENST00000379225.2_1_9:33935729-33948657:-|nuORF	79.45101966838831	0.3281480470254892	6				NaN	NaN	0	NaN	7282	3247	10525
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10532	28.915	NaN	4822.7	30	0	756.84	0.034				-1	KSTVMDLK	8	67	469.2560898009851	936.4976266687702	2	469.2582702636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_KSTVM(Oxidation (M))DLK_	ENST00000367481.7_2_6:147707890-147707950:+|nuORF	44.377184641726394	0.6291511924298419	6				NaN	NaN	0	NaN	7283	3247	10525
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10550	28.952	NaN	72702	30	0	28367	0.214				-1	 	0	81	432.23342151940443	862.4522901056089	2	432.234619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7298	3250	10549
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10551	28.955	NaN	25430	30	0	3160.3	0.106	+			19547	KCGPPWLR	8	92	478.7603569880137	955.5061610428274	2	478.76141357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KCGPPWLR_	ENST00000403796.6_1_11:124932967-124946675:+|nuORF	45.9519527083369	0.6193794311207887	6				NaN	NaN	0	NaN	7299	3250	10549
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10552	28.958	NaN	20594	30	0	4064.9	0.106	+			40284	STSQTFIYK	9	81	537.7756076092628	1073.5366622853255	2	537.77734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STSQTFIYK_	ENSG00000004487|ENST00000400181|KDM1A;nc|ENSG00000004487|O60341|KDM1A	172.24860141594272	0.002383092361811508	6				NaN	NaN	0	NaN	7300	3250	10549
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10553	28.959	NaN	31909	30	0	3759.1	0.106				-1	RYDFFLLVS	9	87	601.3173391286114	1200.6201253240226	2	601.3191528320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))RYDFFLLVS_	ENSG00000124449|ENST00000244314|IRGC;IRGC|p.R143H|1|0.35|ENSG00000124449|chr19:43718986-43718986|G/A|missense_variant	66.42927471994793	0.16001998865088202	6				NaN	NaN	0	NaN	7301	3250	10549
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10554	28.961	NaN	8801.1	30	0	1558	0.106			+	26793	LVSDQQFEGR	10	60	393.5316221084107	1177.5730369254322	3	393.5328369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LVSDQQFEGR_	REV__ENSG00000149571|ENST00000525144|KIRREL3	20.83715455343099	0.7096666582730032	6				NaN	NaN	0	NaN	7302	3250	10549
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10555	28.963	NaN	29012	30	0	4132.5	0.035				-1	 	0	90	504.259851142946	503.252574676346	1	504.261474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7303	3250	10549
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10556	28.964	NaN	5779.9	30	0	1560.5	0.143				-1	 	0	65	324.84207393058193	971.5043923919459	3	324.8430480957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7304	3250	10549
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10574	29.002	NaN	109730	30	0	82301	0.214				-1	 	0	95	406.90518891393555	1217.6937373420067	3	406.906494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7319	3253	10573
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10575	29.006	NaN	93526	30	0	8739.1	0.106	+			25720	LRQVGSVPSL	10	90	528.3144126854138	1054.6142724376275	2	528.3163452148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LRQVGSVPSL_	ENST00000480194.5_1_6:10748006-10756748:+|nuORF	52.936696900407355	0.4300801048568001	6				NaN	NaN	0	NaN	7320	3253	10573
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10576	29.008	NaN	37536	30	0	20217	0.106				-1	 	0	68	448.2702069977947	894.5258610623894	2	448.2713623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7321	3253	10573
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10577	29.01	NaN	87220	30	0	20509	0.106			+	18492	ISGRGKIDPL	10	87	352.5453056466421	1054.6140875401263	3	352.5463562011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ISGRGKIDPL_	REV__ENST00000521792.2_1_8:43125532-43126024:-|nuORF	40.77816245573522	0.5419747034533848	6				NaN	NaN	0	NaN	7322	3253	10573
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10578	29.011	NaN	39867	30	0	6171.2	0.106	+			24893	LKLFTRCLAP	10	93	609.8545277519758	1217.6945025707514	2	609.8562622070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_LKLFTRC(Carbamidomethyl (C))LAP_	RAD21|p.T394A|1|0.21|ENSG00000164754|chr8:116852690-116852690|T/C|missense_variant	60.97194046774394	0.3570005369683776	6				NaN	NaN	0	NaN	7323	3253	10573
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10579	29.013	NaN	26698	30	0	16220	0.039	+			36087	SEKEAKKSSKK	11	70	417.2419517030028	1248.7040257092085	3	417.24310302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SEKEAKKSSKK_	ENSG00000087087|ENST00000611405|SRRT;nc|ENSG00000087087|Q9BXP5-2|SRRT;nc|ENSG00000087087|Q9BXP5-3|SRRT;nc|ENSG00000087087|Q9BXP5-4|SRRT;nc|ENSG00000087087|Q9BXP5-5|SRRT;SRRT|p.F750Lfs*32|1|0.12|ENSG00000087087|chr7:100887778-100887778|T/-|frameshift_variant	37.59989570853033	0.5907838038483115	6				NaN	NaN	0	NaN	7324	3253	10573
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10580	29.014	NaN	19136	30	0	2361	0.139				-1	 	0	72	474.24946285619467	946.4843727791894	2	474.2506408691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7325	3253	10573
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10598	29.053	NaN	25196	30	0	3517.1	0.214	+			31658	QNARSTNSL	9	81	495.75305523527334	989.4915575373467	2	495.7551574707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QNARSTNSL_	THE1B-int_dup1996|chr7:8345870-8347393:+|1.2346957743909006|0.2358979979729452|2.39|457.0|6|1|sense	82.24051045832904	0.08786059719216216	6				NaN	NaN	0	NaN	7340	3256	10597
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10599	29.057	NaN	19366	30	0	9562.6	0.106	+			24427	LGASRSRGIL	10	79	343.87712950406404	1028.6095591123922	3	343.8781433105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LGASRSRGIL_	ENSG00000132436|ENST00000433017|FIGNL1;nc|ENSG00000132436|Q6PIW4-2|FIGNL1	26.69291269510374	0.6618461711292317	6				NaN	NaN	0	NaN	7341	3256	10597
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10600	29.059	NaN	24128	30	0	3149.9	0.106	+			51439	YVDMGVQLPA	10	96	546.774394812921	1091.5342366926418	2	546.7775268554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YVDMGVQLPA_	ENSG00000174611|ENST00000423778|KY;nc|ENSG00000174611|Q8NBH2-3|KY	76.7741389293348	0.22197596950688292	6				NaN	NaN	0	NaN	7342	3256	10597
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10601	29.06	NaN	17230	30	0	1446.1	0.106	+			25784	LSAPEKESTAL	11	83	573.3048689209431	1144.5951849086862	2	573.3060913085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSAPEKESTAL_	nc|ENSG00000187736|Q9H9Q4-2|NHEJ1	54.722347961057174	0.3705654281804646	6				NaN	NaN	0	NaN	7343	3256	10597
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10602	29.062	NaN	21406	30	0	14770	0.106				-1	EVWCLVLCR	9	83	589.2956252764563	1176.5766976197126	2	589.2977905273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_EVWC(Carbamidomethyl (C))LVLCR_	ENST00000487189.5_1_16:11118684-11138007:+|nuORF	53.351449002276354	0.2690372970092375	6				NaN	NaN	0	NaN	7344	3256	10597
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10603	29.064	NaN	49252	30	0	8660.8	0.106	+			42994	TEKKEIAIL	9	98	522.8170113800218	1043.6194698268434	2	522.818603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TEKKEIAIL_	CCPG1|p.K524Nfs*118|1|0.26|ENSG00000260916|chr15:55360201-55360201|T/-|frameshift_variant;ENSG00000260916|ENST00000442196|CCPG1;ENST00000568372.5_1_15:55651699-55664264:-|nuORF;nc|ENSG00000260916|Q9ULG6-2|CCPG1;nc|ENSG00000260916|Q9ULG6-4|CCPG1;nc|ENSG00000260916|Q9ULG6|CCPG1	96.0336014099291	0.047854655524928534	6				NaN	NaN	0	NaN	7345	3256	10597
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10604	29.066	NaN	18024	30	0	3080.9	0.034				-1	FIIMAMVA	8	80	456.24037061471523	910.4661882962305	2	456.2415771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_FIIM(Oxidation (M))AMVA_	tr|U7SG82|U7SG82_FUSNUUPF0324membraneproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02215PE=3SV=1	43.626045697637714	0.6338121648150432	6				NaN	NaN	0	NaN	7346	3256	10597
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10622	29.102	NaN	68686	30	0	11749	0.214			+	12534	GEFKVEAR	8	91	468.2511404441547	934.4877279551094	2	468.2523193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEFKVEAR_	REV__CON__Q9U6Y5	87.69643885390035	0.28444366722805053	6				NaN	NaN	0	NaN	7361	3259	10621
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10623	29.106	NaN	26741	30	0	9302.1	0.106	+			14091	GSLGFLVGRI	10	68	340.20490170230175	1017.5928757071053	3	340.20623779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSLGFLVGRI_	ENST00000542104.5_2_12:65089076-65089520:+|nuORF	42.86426827375447	0.522752283233888	6				NaN	NaN	0	NaN	7362	3259	10621
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10624	29.108	NaN	13983	30	0	2552.1	0.106	+			5473	AVAAFQVEK	9	77	481.7687740812357	NaN	0	481.7688903808594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AVAAFQVEK_	ENSG00000185000|ENST00000528718|DGAT1;ENST00000525371.1_1_8:145542007-145542573:-|nuORF;ENST00000531896.5_1_8:145541583-145550314:-|nuORF	96.0336014099291	0.029433397039169355	6				NaN	NaN	0	NaN	7363	3259	10621
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10625	29.11	NaN	18286	30	0	2442.4	0.106				-1	 	0	90	457.2700869210783	912.5256209089566	2	457.2710876464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7364	3259	10621
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10626	29.112	NaN	13735	30	0	1352.8	0.106				-1	 	0	78	385.71221055102876	769.4098681688575	2	385.7134094238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7365	3259	10621
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10627	29.113	NaN	35399	30	0	2441.5	0.106	+			22210	KSTSTGKRK	9	107	496.796480534765	991.57840813633	2	496.7979431152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KSTSTGKRK_	ENST00000541207.1_1_12:12674099-12674270:-|nuORF	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	7366	3259	10621
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10628	29.115	NaN	11043	30	0	3761.3	0.036	+			42995	TEKKEIAIL	9	76	348.8799364557165	1043.6179799673496	3	348.8812561035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TEKKEIAIL_	CCPG1|p.K524Nfs*118|1|0.26|ENSG00000260916|chr15:55360201-55360201|T/-|frameshift_variant;ENSG00000260916|ENST00000442196|CCPG1;ENST00000568372.5_1_15:55651699-55664264:-|nuORF;nc|ENSG00000260916|Q9ULG6-2|CCPG1;nc|ENSG00000260916|Q9ULG6-4|CCPG1;nc|ENSG00000260916|Q9ULG6|CCPG1	52.936696900407355	0.27249468807391813	6				NaN	NaN	0	NaN	7367	3259	10621
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10646	29.153	NaN	305400	30	0	100450	0.143				-1	 	0	73	468.71272432362304	935.4108957140461	2	468.71380615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7382	3262	10645
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10647	29.155	NaN	71062	30	0	9409.5	0.106	+			7656	DKRSSLYFP	9	101	556.7902485502855	1111.5659441673708	2	556.792236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DKRSSLYFP_	ENSG00000137478|ENST00000409418|FCHSD2;nc|ENSG00000137478|O94868-2|FCHSD2	85.16082228582465	0.07850854922700509	6				NaN	NaN	0	NaN	7383	3262	10645
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10648	29.157	NaN	21278	30	0	5535.1	0.106				-1	 	0	79	331.5334454788531	991.5785070367592	3	331.5343933105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7384	3262	10645
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10649	29.159	NaN	21800	30	0	2739.4	0.106			+	23744	LCALLGDVRCP	11	97	580.3019531004854	1158.5893532677708	2	580.3035888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LCALLGDVRCP_	REV__ENST00000445498.5_1_10:11936211-11936358:-|nuORF	87.75429964447693	0.10796790192242164	6				NaN	NaN	0	NaN	7385	3262	10645
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10650	29.161	NaN	21701	30	0	2698	0.106	+			28369	NEKVIEHIM	9	110	371.5291879378363	1111.565734413709	3	371.5306396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NEKVIEHIM_	ENSG00000163220|ENST00000368738|S100A9	60.11826168202944	0.21262886028301267	6				NaN	NaN	0	NaN	7386	3262	10645
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10651	29.163	NaN	13699	30	0	2984.6	0.106			+	18059	IIVVILSMAD	10	97	358.5483343075381	1072.6231735228143	3	358.220458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IIVVILSMAD_	REV__ENST00000513762.2_1_4:2909397-2910421:+|nuORF	30.503639358989545	0.6307262373768582	6				NaN	NaN	0	NaN	7387	3262	10645
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10652	29.164	NaN	19922	30	0	2763	0.032			+	26295	LSVDGPVK	8	87	407.7359338811964	813.4573148291928	2	407.7369384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSVDGPVK_	REV__ENSG00000155659|ENST00000374737|VSIG4;REV__nc|ENSG00000155659|Q9Y279-2|VSIG4;REV__nc|ENSG00000155659|Q9Y279-3|VSIG4	60.97194046774394	0.49215940876911696	6				NaN	NaN	0	NaN	7388	3262	10645
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10670	29.2	NaN	23812	30	0	3101.3	0.214				-1	 	0	81	521.7786227533597	1041.5426925735194	2	521.7806396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7403	3265	10669
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10671	29.204	NaN	20476	30	0	3468.4	0.106	+			42905	TEHINIHQL	9	88	552.7920482212699	1103.5695435093396	2	552.7941284179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEHINIHQL_	ENSG00000180353|ENST00000314583|HCLS1;ENST00000481314.5_1_3:121363541-121379717:-|nuORF;ENST00000487290.5_1_3:121363549-121379717:-|nuORF;nc|ENSG00000180353|P14317-2|HCLS1	127.46168284122857	0.016682644177004526	6				NaN	NaN	0	NaN	7404	3265	10669
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10672	29.206	NaN	40610	30	0	8045.1	0.106				-1	 	0	101	451.2230394674059	900.4315260016118	2	451.2243347167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7405	3265	10669
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10673	29.207	NaN	17521	30	0	2132.9	0.106	+			27717	MQKPAFFEV	9	88	548.7770194490959	1095.5394859649916	2	548.7802124023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MQKPAFFEV_	ENST00000409467.5_1_7:33069288-33075596:-|nuORF	56.72105179125745	0.24094814563026265	6				NaN	NaN	0	NaN	7406	3265	10669
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10674	29.209	NaN	12753	30	0	1473.5	0.106	+			22393	KTIIFVETK	9	79	539.8277137666239	1077.6408746000477	2	539.8296508789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KTIIFVETK_	ENSG00000100201|ENST00000403230|DDX17;ENST00000216019.11_1_22:38888049-38902242:-|nuORF;ENST00000432525.5_1_22:38886367-38903636:-|nuORF;ENST00000497196.5_1_22:38889517-38891019:-|nuORF;nc|ENSG00000100201|Q92841-1|DDX17;nc|ENSG00000100201|Q92841-2|DDX17;nc|ENSG00000100201|Q92841-3|DDX17	86.18897241530135	0.07560986027002226	6				NaN	NaN	0	NaN	7407	3265	10669
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10675	29.211	NaN	13987	30	0	1822	0.036			+	32566	QVVTIKGKSN	10	92	537.3199556760102	1072.6253584188203	2	537.322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QVVTIKGKSN_	REV__ENSG00000183091|ENST00000397345|NEB;REV__nc|ENSG00000183091|P20929-1|NEB;REV__nc|ENSG00000183091|P20929-3|NEB;REV__nc|ENSG00000183091|P20929-4|NEB	65.15724298150197	0.31893571707528906	6				NaN	NaN	0	NaN	7408	3265	10669
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10676	29.212	NaN	8452.5	30	0	2935	0.139				-1	VSPAMLLF	8	61	447.2439641384405	892.473375343681	2	447.24493408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_VSPAM(Oxidation (M))LLF_	ENST00000285071.8_1_17:17116142-17116382:-|nuORF	37.028477286268924	0.6747514403204248	6				NaN	NaN	0	NaN	7409	3265	10669
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10694	29.251	NaN	29300	30	0	3050.5	0.214	+			11533	FPESAHDPG	9	106	478.7092441656441	955.4039353980883	2	478.7104187011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FPESAHDPG_	BLCAP|p.L75F|1|0.09|ENSG00000166619|chr20:37518952-37518952|G/A|missense_variant	45.9519527083369	0.35044536499095585	6				NaN	NaN	0	NaN	7424	3268	10693
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10695	29.255	NaN	24813	30	0	5313	0.106	+			14027	GSGAFGTVYK	10	92	493.7492002746103	985.4838476160206	2	493.7503662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GSGAFGTVYK_	ENSG00000141736|ENST00000269571|ERBB2;ENSG00000146648|ENST00000275493|EGFR;ENSG00000178568|ENST00000342788|ERBB4;ENST00000484594.5_1_2:212426591-213403254:-|nuORF;ENST00000583038.5_1_17:37872360-37881463:+|nuORF;ERBB4|p.H801Mfs*27|1|0.39|ENSG00000178568|chr2:211561989-211561989|G/-|frameshift_variant;ERBB4|p.N1177Mfs*27|1|0.33|ENSG00000178568|chr2:211384012-211384012|T/-|frameshift_variant;nc|ENSG00000141736|P04626-2|ERBB2;nc|ENSG00000141736|P04626-3|ERBB2;nc|ENSG00000141736|P04626-4|ERBB2;nc|ENSG00000141736|P04626-5|ERBB2;nc|ENSG00000141736|P04626-6|ERBB2;nc|ENSG00000178568|Q15303-2|ERBB4;nc|ENSG00000178568|Q15303-3|ERBB4;nc|ENSG00000178568|Q15303-4|ERBB4	128.60217544463768	0.01518043149187549	6				NaN	NaN	0	NaN	7425	3268	10693
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10696	29.257	NaN	26714	30	0	12059	0.106	+			38957	SSRANRGI	8	86	430.73868679604345	859.4628206588869	2	430.7396545410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSRANRGI_	ENST00000355040.8_1_11:64001470-64001653:+|nuORF	44.116797842482775	0.6307669463330267	6				NaN	NaN	0	NaN	7426	3268	10693
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10697	29.258	NaN	17250	30	0	3744.2	0.106	+			26485	LTLRNRSTE	9	89	545.3047260275004	1088.5948991218006	2	545.3064575195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LTLRNRSTE_	ENSG00000127329|ENST00000334414|PTPRB;nc|ENSG00000127329|P23467-2|PTPRB;nc|ENSG00000127329|P23467-4|PTPRB;nc|ENSG00000127329|P23467|PTPRB;PTPRB|p.P1449Lfs*9|1|0.31|ENSG00000127329|chr12:70555303-70555303|G/-|frameshift_variant	49.44154591367651	0.3095138337212152	6				NaN	NaN	0	NaN	7427	3268	10693
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10698	29.26	NaN	30465	30	0	5513	0.106			+	18381	IRACITML	8	86	489.2672936645463	976.5200343958926	2	489.26837158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_IRAC(Carbamidomethyl (C))ITML_	REV__ENSG00000137076|ENST00000314888|TLN1;REV__ENST00000378192.2_1_9:35723947-35725691:-|nuORF;REV__nc|ENSG00000137076|Q9Y490-2|TLN1;REV__TLN1|p.P1628Rfs*20|1|0.44|ENSG00000137076|chr9:35707144-35707144|G/-|frameshift_variant;REV__TLN1|p.S405Afs*84|1|0.3|ENSG00000137076|chr9:35720503-35720503|T/-|frameshift_variant	65.80317337860623	0.44433089765398776	6				NaN	NaN	0	NaN	7428	3268	10693
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10699	29.262	NaN	41093	30	0	7001.6	0.036			+	51385	YTLRQNGNH	9	93	551.7728329229016	1101.531112912603	2	551.7743530273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YTLRQNGNH_	REV__ENSG00000120729|ENST00000239926|MYOT;REV__nc|ENSG00000120729|Q9UBF9|MYOT	72.87924865735499	0.12833875048249987	6				NaN	NaN	0	NaN	7429	3268	10693
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10700	29.263	NaN	6887.3	30	0	688.79	0.14	+			1771	AICFPRPL	8	69	458.75717592638927	915.4997989195786	2	458.7584533691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AICFPRPL_	chr3:170038809-170038915|196|19.47|0.81|4.59|+|2|None,GPR160|1	46.76643321282427	0.6143254112625767	6				NaN	NaN	0	NaN	7430	3268	10693
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10718	29.301	NaN	25348	30	0	2620.4	0.214				-1	 	0	98	523.2965443274529	1044.5785357217057	2	523.2984008789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7445	3271	10717
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10719	29.304	NaN	32923	30	0	15165	0.106				-1	 	0	86	495.76497184069075	989.5153907481815	2	495.7662353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7446	3271	10717
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10720	29.306	NaN	21107	30	0	2819.7	0.106	+			27432	MLENYRNLF	9	87	600.2974617447031	1198.5803705562062	2	600.2994384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MLENYRNLF_	ENSG00000005801|ENST00000399602|ZNF195;ENSG00000223614|ENST00000429565|ZNF735;ENST00000330692.11_1_11:3384610-3394821:-|nuORF;nc|ENSG00000005801|O14628-4|ZNF195;nc|ENSG00000005801|O14628-5|ZNF195;nc|ENSG00000005801|O14628-6|ZNF195;nc|ENSG00000005801|O14628-7|ZNF195;nc|ENSG00000005801|O14628-8|ZNF195;ZNF195|p.F271Ifs*19|1|0.28|ENSG00000005801|chr11:3360197-3360198|-/T|frameshift_variant;ZNF735|p.K127Nfs*6|4|0.39|ENSG00000223614|chr7:64219426-64219426|A/-|frameshift_variant;ZNF735|p.K189Nfs*12|1|0.14|ENSG00000223614|chr7:64219613-64219613|A/-|frameshift_variant;ZNF735|p.L55M|1|0.09|ENSG00000223614|chr7:64213215-64213215|C/A|missense_variant	34.172542307311794	0.4838870758800184	6				NaN	NaN	0	NaN	7447	3271	10717
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10721	29.308	NaN	8232.5	30	0	2220.3	0.106			+	-1	SACFRPHMI	9	67	387.5159416983073	1159.525995695122	3	387.5171813964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))SAC(Carbamidomethyl (C))FRPHMI_	REV__ENSG00000188558|ENST00000641804|OR2G6;REV__OR2G6|p.I133V|1|0.26|ENSG00000188558|chr1:248522043-248522043|A/G|missense_variant;REV__OR2G6|p.N269Tfs*12|1|0.27|ENSG00000188558|chr1:248522448-248522448|A/-|frameshift_variant	34.172542307311794	0.4838870758800184	6				NaN	NaN	0	NaN	7448	3271	10717
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10722	29.31	NaN	25139	30	0	4231.9	0.106	+			46841	VIFIIIFSY	9	100	372.22288068227704	1113.646812647031	3	372.2239685058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VIFIIIFSY_	ENSG00000165370|ENST00000651716|GPR101	49.44154591367651	0.3095138337212152	6				NaN	NaN	0	NaN	7449	3271	10717
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10723	29.312	NaN	9975.4	30	0	2460.4	0.106	+			3018	ASFDKAKLK	9	78	336.5344378546052	NaN	0	336.5340881347656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASFDKAKLK_	ENSG00000034510|ENST00000233143|TMSB10	49.44154591367651	0.21054156626303966	6				NaN	NaN	0	NaN	7450	3271	10717
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10724	29.313	NaN	17806	30	0	1883.4	0.035			+	-1	DCRQAESY	8	88	514.7091364952579	1027.4037200573157	2	514.7107543945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_DC(Carbamidomethyl (C))RQAESY_	REV__ENSG00000197324|ENST00000359591|LRP10;REV__LRP10|p.P676Lfs*28|2|0.23|ENSG00000197324|chr14:22877407-22877407|C/-|frameshift_variant;REV__nc|ENSG00000197324|Q7Z4F1-2|LRP10	68.484700416344	0.4195245774506064	6				NaN	NaN	0	NaN	7451	3271	10717
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10742	29.351	NaN	98572	30	0	17374	0.214				-1	 	0	109	544.325545199052	1086.636537464904	2	544.32763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7466	3274	10741
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10743	29.355	NaN	57257	30	0	21684	0.106			+	27426	MLARTMRN	8	88	496.7599713831181	991.5053898330362	2	496.7618408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MLARTMRN_	REV__ENSG00000025772|ENST00000372813|TOMM34	65.80317337860623	0.44433089765398776	6				NaN	NaN	0	NaN	7467	3274	10741
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10744	29.357	NaN	28260	30	0	3797	0.106			+	24118	LEKRNHVR	8	81	526.3096162956665	1050.604679658133	2	526.3114624023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LEKRNHVR_	REV__ENSG00000175600|ENST00000335693|SUGCT;REV__nc|ENSG00000175600|Q9HAC7-2|SUGCT;REV__nc|ENSG00000175600|Q9HAC7-3|SUGCT;REV__nc|ENSG00000175600|Q9HAC7-4|SUGCT;REV__SUGCT|p.S389Wfs*17|1|0.03|ENSG00000175600|chr7:40749486-40749487|-/ATGGCAAAACACAGAAGTG|frameshift_variant	65.80317337860623	0.44433089765398776	6				NaN	NaN	0	NaN	7468	3274	10741
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10745	29.359	NaN	21842	30	0	4828.7	0.106			+	-1	MTVRTCQKI	9	79	548.2861478927117	1094.5577428522233	2	548.288330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_M(Oxidation (M))TVRTCQKI_	REV__ACE|p.I462Lfs*63|2|0.27|ENSG00000159640|chr17:63483065-63483065|A/-|frameshift_variant;REV__ACE|p.M457Wfs*68|1|0.41|ENSG00000159640|chr17:63483051-63483051|A/-|frameshift_variant;REV__ACE|p.P1103Qfs*69|1|0.14|ENSG00000159640|chr17:63494393-63494393|C/-|frameshift_variant;REV__ACE|p.S903Rfs*9|1|0.07|ENSG00000159640|chr17:63491014-63491014|C/-|frameshift_variant;REV__ENSG00000159640|ENST00000290866|ACE;REV__ENST00000582678.5_1_17:61557143-61562826:+|nuORF;REV__nc|ENSG00000159640|P12821-2|ACE	68.78682469695295	0.14603441672067394	6				NaN	NaN	0	NaN	7469	3274	10741
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10746	29.36	NaN	54886	30	0	35436	0.106			+	-1	VTLTMLLPAL	10	74	363.2194706017475	1086.6365824054426	3	363.2205505371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_VTLTM(Oxidation (M))LLPAL_	REV__ENSG00000184999|ENST00000332793|SLC22A10	44.377184641726394	0.5088115166961078	6				NaN	NaN	0	NaN	7470	3274	10741
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10747	29.362	NaN	59573	30	0	10922	0.033				-1	 	0	78	422.7125547986878	843.4105566641756	2	422.713623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7471	3274	10741
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10748	29.363	NaN	31502	30	0	6902.1	0.138	+			14790	GTLASSFAR	9	75	455.24116958901203	908.4677862448241	2	455.24285888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GTLASSFAR_	ENST00000563117.5_1_16:20817227-20817782:-|nuORF;ENST00000565884.5_1_16:20817227-20817407:-|nuORF	132.757866228626	0.013877640931359021	6				NaN	NaN	0	NaN	7472	3274	10741
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10766	29.402	NaN	154290	30	0	25388	0.168	+			45487	TYDKMWAF	8	95	531.2418036366249	1060.4690543400498	2	531.2432250976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TYDKMWAF_	ENSG00000164418|ENST00000369134|GRIK2;GRIK2|p.G830Efs*34|1|0.07|ENSG00000164418|chr6:102055506-102055507|-/AA|frameshift_variant;nc|ENSG00000164418|Q13002-2|GRIK2;nc|ENSG00000164418|Q13002-4|GRIK2;nc|ENSG00000164418|Q13002-5|GRIK2;nc|ENSG00000164418|Q13002-6|GRIK2	79.45101966838831	0.3281480470254892	6				NaN	NaN	0	NaN	7487	3277	10765
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10767	29.405	NaN	38611	30	0	8838.1	0.106				-1	 	0	95	501.301656358658	1000.5887597841161	2	501.3031311035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7488	3277	10765
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10768	29.407	NaN	23675	30	0	3212.6	0.106	+			7094	CVTVFLHH	8	75	478.24451742914016	954.4744819250803	2	478.2456970214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_CVTVFLHH_	ENSG00000120253|ENST00000340413|NUP43;nc|ENSG00000120253|Q8NFH3-2|NUP43;NUP43|p.L312Ffs*4|1|0.21|ENSG00000120253|chr6:149727176-149727177|-/A|frameshift_variant;NUP43|p.N106H|1|0.15|ENSG00000120253|chr6:149743643-149743643|T/G|missense_variant	54.76467175910256	0.5536104764165384	6				NaN	NaN	0	NaN	7489	3277	10765
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10769	29.409	NaN	12860	30	0	2275.4	0.106			+	11810	FSSRLQPLS	9	86	517.7831004468629	1033.5516479605258	2	517.785400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FSSRLQPLS_	REV__ENST00000558911.1_1_15:99893907-99894012:+|nuORF	63.42647028704847	0.1850514934184437	6				NaN	NaN	0	NaN	7490	3277	10765
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10770	29.41	NaN	13405	30	0	2391.9	0.106				-1	 	0	68	459.21161397183886	916.4086750104777	2	459.2127380371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7491	3277	10765
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10771	29.412	NaN	14799	30	0	3768.3	0.106				-1	 	0	71	451.2575086550702	900.5004643769404	2	451.2585754394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7492	3277	10765
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10772	29.414	NaN	19828	30	0	1940.1	0.034	+			27312	MGVPNSHW	8	80	464.21086848391525	926.4071840346305	2	464.2122497558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MGVPNSHW_	ENSG00000139505|ENST00000381801|MTMR6;nc|ENSG00000139505|Q9Y217-2|MTMR6	54.76467175910256	0.5536104764165384	6				NaN	NaN	0	NaN	7493	3277	10765
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10790	29.45	NaN	340920	30	0	61962	0.143	+			3830	ATAIGMPVEK	10	91	508.7763373425582	NaN	0	508.7764892578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATAIGMPVEK_	ENSG00000109736|ENST00000355443|MFSD10;ENST00000509676.1_1_4:2934766-2935650:-|nuORF;MFSD10|p.S111Gfs*48|1|0.44|ENSG00000109736|chr4:2933125-2933147|GGGCGCCTCCCCAAGCAGTCAGA/-|frameshift_variant	117.5257442709337	0.019482996141789537	6				NaN	NaN	0	NaN	7508	3280	10789
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10791	29.453	NaN	39451	30	0	7441.2	0.106			+	33417	RIHKGRLQ	8	107	504.3147970685577	1006.6150412039154	2	504.3164978027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RIHKGRLQ_	REV__sp|F5HBR4|PORTL_HCMVMPortalproteinOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL104PE=3SV=1;REV__sp|P16735|PORTL_HCMVAPortalproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL104PE=1SV=2	47.91560031466742	0.6071945918984287	6				NaN	NaN	0	NaN	7509	3280	10789
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10792	29.455	NaN	110690	30	0	10775	0.106	+			1627	AGMALGIQK	9	118	444.75063997736515	887.4867270215303	2	444.7521667480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AGMALGIQK_	ENSG00000174851|ENST00000376901|YIF1A	148.20599733432147	0.007287282186870133	6				NaN	NaN	0	NaN	7510	3280	10789
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10793	29.456	NaN	21989	30	0	5919.9	0.106	+			12700	GEKLLRPSL	9	72	338.2089119324574	1011.6049063975722	3	338.2098388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEKLLRPSL_	ENSG00000064651|ENST00000262461|SLC12A2;nc|ENSG00000064651|P55011-3|SLC12A2;SLC12A2|p.E1119Rfs*7|1|0.47|ENSG00000064651|chr5:128184417-128184418|-/A|frameshift_variant;SLC12A2|p.F466Lfs*59|1|0.11|ENSG00000064651|chr5:128135793-128135793|T/-|frameshift_variant;SLC12A2|p.P1171Sfs*18|1|0.38|ENSG00000064651|chr5:128186498-128186499|-/TC|frameshift_variant	106.68306549817024	0.032382560583716295	6				NaN	NaN	0	NaN	7511	3280	10789
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10794	29.458	NaN	14298	30	0	1400.3	0.106				-1	 	0	82	480.2497709227722	958.4849889123444	2	480.25091552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7512	3280	10789
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10795	29.46	NaN	9455.3	30	0	2849.5	0.106	+			13710	GPSGRLSSL	9	67	437.242245778006	872.469938622812	2	437.2430114746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GPSGRLSSL_	ENST00000526097.1_1_8:11418120-11421614:+|nuORF	82.24051045832904	0.08786059719216216	6				NaN	NaN	0	NaN	7513	3280	10789
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10796	29.462	NaN	24897	30	0	3704.6	0.036			+	33482	RKACINCEY	9	92	550.2548852952821	1098.495217657364	2	550.257080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RKACINCEY_	REV__ENSG00000169155|ENST00000373464|ZBTB43	47.91560031466742	0.327412564698279	6				NaN	NaN	0	NaN	7514	3280	10789
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10811	29.492	NaN	19831	30	0	1898.5	0.215	+			42780	TEAETIQKL	9	95	516.7799375347328	1031.5453221362654	2	516.782470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEAETIQKL_	ENSG00000138768|ENST00000514213|USO1;nc|ENSG00000138768|O60763-2|USO1;USO1|p.I920Sfs*9|1|0.08|ENSG00000138768|chr4:75812332-75812333|-/GAGCTTT|frameshift_variant;USO1|p.K251*|2|0.26|ENSG00000138768|chr4:75782746-75782747|-/T|frameshift_variant;USO1|p.K919Tfs*8|1|0.08|ENSG00000138768|chr4:75812331-75812332|-/C|frameshift_variant	112.41091882917199	0.026537921851008135	6				NaN	NaN	0	NaN	7526	3283	10810
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10812	29.495	NaN	13139	30	0	3487.3	0.106			+	26930	LYGCHRGM	8	81	468.71272432362304	935.4108957140461	2	468.7142639160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LYGCHRGM_	REV__ENSG00000067057|ENST00000381125|PFKP;REV__ENSG00000141959|ENST00000349048|PFKL;REV__ENSG00000152556|ENST00000359794|PFKM;REV__ENST00000397961.6_1_21:45725201-45746742:+|nuORF;REV__ENST00000466134.5_1_21:45719988-45734072:+|nuORF;REV__ENST00000546964.5_1_12:48513149-48528944:+|nuORF;REV__nc|ENSG00000067057|Q01813-2|PFKP;REV__nc|ENSG00000141959|P17858-2|PFKL;REV__nc|ENSG00000152556|P08237-2|PFKM;REV__nc|ENSG00000152556|P08237-3|PFKM;REV__PFKL|p.P704Qfs*6|1|0.29|ENSG00000141959|chr21:44326177-44326177|C/-|frameshift_variant;REV__PFKM|p.A266Efs*59|1|0.04|ENSG00000152556|chr12:48134991-48134992|-/AGGGATTT|frameshift_variant;REV__PFKP|p.R265Gfs*2|3|0.32|ENSG00000067057|chr10:3107226-3107226|A/-|frameshift_variant	44.53106598305862	0.628196326904373	6				NaN	NaN	0	NaN	7527	3283	10810
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10813	29.497	NaN	12816	30	0	1130.3	0.106				-1	 	0	82	463.8041431631704	925.5937333931408	2	463.8053894042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7528	3283	10810
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10814	29.499	NaN	12451	30	0	4257.2	0.106			+	50959	YIHGTDKKQVL	11	81	434.57844811586517	1300.7135149477956	3	434.5798034667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YIHGTDKKQVL_	REV__ENSG00000211455|ENST00000389032|STK38L;REV__nc|ENSG00000211455|Q9Y2H1-2|STK38L;REV__STK38L|p.F383Lfs*9|1|0.1|ENSG00000211455|chr12:27319392-27319392|T/-|frameshift_variant	45.908116695636124	0.4771019740774998	6				NaN	NaN	0	NaN	7529	3283	10810
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10815	29.501	NaN	7624	30	0	1873.8	0.106			+	18619	ISSLVGGNSN	10	71	474.2423898440871	946.4702267549742	2	474.2433776855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ISSLVGGNSN_	REV__ENSG00000104067|ENST00000614355|TJP1;REV__nc|ENSG00000104067|Q07157-2|TJP1;REV__nc|ENSG00000104067|Q07157|TJP1	59.93077597824379	0.36646980200755325	6				NaN	NaN	0	NaN	7530	3283	10810
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10816	29.503	NaN	8655.5	30	0	742.84	0.037			+	9718	EMNRQPPLF	9	78	566.2866895130848	1130.5588260929694	2	566.2884521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EMNRQPPLF_	REV__ENSG00000138002|ENST00000260570|IFT172;REV__nc|ENSG00000138002|Q9UG01-2|IFT172	71.29570347882199	0.13518600952103718	6				NaN	NaN	0	NaN	7531	3283	10810
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10817	29.504	NaN	10007	30	0	1604.3	0.145	+			7075	CVKEIKRLK	9	87	372.9030238308409	1115.6872420927227	3	372.90435791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_CVKEIKRLK_	ENSG00000102910|ENST00000285737|LONP2;LONP2|p.D678Efs*7|1|0.07|ENSG00000102910|chr16:48347601-48347602|-/GT|frameshift_variant;nc|ENSG00000102910|Q86WA8-2|LONP2	28.081489160057373	0.5408112046645406	6				NaN	NaN	0	NaN	7532	3283	10810
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10835	29.542	NaN	51514	30	0	12198	0.213				-1	MQMKLMEMK	9	91	601.2758018053376	1200.537050677475	2	601.2779541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_MQM(Oxidation (M))KLMEM(Oxidation (M))K_	ENSG00000085832|ENST00000371733|EPS15;EPS15|p.D501Y|1|0.19|ENSG00000085832|chr1:51406081-51406081|C/A|missense_variant;EPS15|p.R789Dfs*14|1|0.37|ENSG00000085832|chr1:51361350-51361350|T/-|frameshift_variant;nc|ENSG00000085832|P42566-2|EPS15	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	7547	3286	10834
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10836	29.546	NaN	12239	30	0	2548.1	0.106	+			14925	GTMAMTVVTK	10	78	519.7674812438502	1037.5204095545002	2	519.7698364257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTMAMTVVTK_	ENSG00000175115|ENST00000320580|PACS1;nc|ENSG00000175115|Q6VY07-2|PACS1	125.71293069911285	0.01926106323661889	6				NaN	NaN	0	NaN	7548	3286	10834
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10837	29.548	NaN	17319	30	0	4767.3	0.106	+			1606	AGLRHRRE	8	61	332.1930961437474	993.5574590314422	3	332.19415283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AGLRHRRE_	ENST00000503240.5_1_5:148743537-148748214:+|nuORF;ENST00000507621.1_1_5:148743537-148743774:+|nuORF	24.20275056022122	0.7724576178584145	6				NaN	NaN	0	NaN	7549	3286	10834
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10838	29.55	NaN	9942.1	30	0	1994.6	0.106			+	-1	DMLSTMAAKR	10	73	380.52304836921166	1138.547315707835	3	380.5243225097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_DM(Oxidation (M))LSTMAAKR_	REV__DNAJC7-TBCD|1|fusion;REV__ENSG00000141556|ENST00000355528|TBCD;REV__ENST00000571796.5_1_17:80869637-80887508:+|nuORF;REV__nc|ENSG00000141556|Q9BTW9-4|TBCD	31.634271133179894	0.6214930414500597	6				NaN	NaN	0	NaN	7550	3286	10834
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10839	29.551	NaN	12320	30	0	7043.8	0.106			+	24532	LGLGAALA	8	73	343.216038946596	684.417524959992	2	343.21710205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LGLGAALA_	REV__ENSG00000260001|ENST00000565886|TGFBR3L;REV__nc|ENSG00000260001|H3BV60|TGFBR3L	24.504012794735996	0.7701314986472447	6				NaN	NaN	0	NaN	7551	3286	10834
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10840	29.553	NaN	18956	30	0	1386.2	0.034			+	42545	TASATGRPVV	10	94	479.76734118215046	957.5201294311009	2	479.7690124511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TASATGRPVV_	REV__ENSG00000196663|ENST00000359520|TECPR2;REV__nc|ENSG00000196663|O15040-2|TECPR2	75.04331003522576	0.23611669241777622	6				NaN	NaN	0	NaN	7552	3286	10834
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10841	29.554	NaN	6534.7	30	0	1048.5	0.144			+	7657	DKRTKLIKE	9	74	377.5679750511845	1129.6820957537534	3	377.56939697265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DKRTKLIKE_	REV__ADAM7|p.L594Yfs*29|2|0.18|ENSG00000069206|chr8:24493162-24493162|T/-|frameshift_variant;REV__ENSG00000069206|ENST00000175238|ADAM7	35.15202426646627	0.4747332964206883	6				NaN	NaN	0	NaN	7553	3286	10834
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10859	29.593	NaN	116490	30	0	12462	0.214			+	19335	KAKEKERDTQ	10	116	616.8331672230445	1231.6517815128889	2	616.835205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KAKEKERDTQ_	REV__ENSG00000134369|ENST00000685211|NAV1;REV__ENST00000469130.5_1_1:201751782-201763782:+|nuORF;REV__NAV1|p.K1211Efs*5|1|0.68|ENSG00000134369|chr1:201803700-201803701|AA/-|frameshift_variant;REV__nc|ENSG00000134369|Q8NEY1-2|NAV1;REV__nc|ENSG00000134369|Q8NEY1-3|NAV1;REV__nc|ENSG00000134369|Q8NEY1-4|NAV1;REV__nc|ENSG00000134369|Q8NEY1-5|NAV1;REV__nc|ENSG00000134369|Q8NEY1-6|NAV1;REV__nc|ENSG00000134369|Q8NEY1-7|NAV1;REV__nc|ENSG00000134369|Q8NEY1|NAV1	67.49366992349736	0.29779660154124327	6				NaN	NaN	0	NaN	7568	3289	10858
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10860	29.596	NaN	80058	30	0	5724.9	0.106	+			24694	LHCYDPVADQ	10	112	580.7550617405203	1159.4955705478405	2	580.757568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LHCYDPVADQ_	ENSG00000167487|ENST00000300976|KLHL26	49.44154591367651	0.46214596422418036	6				NaN	NaN	0	NaN	7569	3289	10858
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10861	29.599	NaN	29037	30	0	11147	0.106				-1	 	0	83	568.7991246667394	1135.5836964002788	2	568.8011474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7570	3289	10858
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10862	29.6	NaN	18348	30	0	4197.1	0.106			+	10226	ETHLSYTQL	9	87	546.2720929332277	1090.5296329332552	2	546.2739868164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ETHLSYTQL_	REV__ENSG00000176473|ENST00000402312|WDR25;REV__nc|ENSG00000176473|Q64LD2-2|WDR25;REV__WDR25|p.H424Pfs*45|1|0.16|ENSG00000176473|chr14:100526032-100526033|-/T|frameshift_variant	56.72105179125745	0.24094814563026265	6				NaN	NaN	0	NaN	7571	3289	10858
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10863	29.602	NaN	11919	30	0	1268.1	0.106	+			11083	FEVGKKICLS	10	93	562.3137672878141	1122.6129816424282	2	562.80908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FEVGKKICLS_	ENSG00000198833|ENST00000435041|UBE2J1	44.116797842482775	0.5112108506279902	6				NaN	NaN	0	NaN	7572	3289	10858
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10864	29.604	NaN	15957	30	0	3606.9	0.038	+			37995	SPKSMPKDAQM	11	89	626.2892019110518	1250.5638508889035	2	626.2913818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Oxidation (M)	_SPKSM(Oxidation (M))PKDAQM(Oxidation (M))_	ENSG00000273841|ENST00000217893|TAF9;TAF9|p.I28Lfs*9|1|0.43|ENSG00000273841|chr5:69365656-69365656|T/-|frameshift_variant	59.93077597824379	0.32407304095777845	6				NaN	NaN	0	NaN	7573	3289	10858
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10865	29.605	NaN	11638	30	0	1531.9	0.14				-1	 	0	78	407.73574962282294	813.4569463124459	2	407.7369079589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7574	3289	10858
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10883	29.642	NaN	57232	30	0	5716.7	0.198			+	23776	LCLCQICCLM	10	111	381.50237109092006	1141.4852838729603	3	381.5037841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LCLCQICCLM_	REV__ENSG00000061492|ENST00000506684|WNT8A	40.5726180659479	0.5438686920517214	6				NaN	NaN	0	NaN	7589	3292	10882
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10884	29.646	NaN	46171	30	0	21357	0.106	+			39569	STGKRVSTCP	10	87	364.8537618061067	1091.5394560185202	3	364.85498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_STGKRVSTC(Carbamidomethyl (C))P_	ADNP2|p.K1045Nfs*29|1|0.42|ENSG00000101544|chr18:80138543-80138543|A/-|frameshift_variant;ENSG00000101544|ENST00000262198|ADNP2	44.377184641726394	0.5088115166961078	6				NaN	NaN	0	NaN	7590	3292	10882
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10885	29.648	NaN	14738	30	0	2657.1	0.106	+			6914	CLWRGGPAL	9	80	486.7578055252819	971.5010581173639	2	486.75885009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_CLWRGGPAL_	ENST00000490681.1_1_3:52566230-52566458:-|nuORF	60.29395666154354	0.21116425950210296	6				NaN	NaN	0	NaN	7591	3292	10882
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10886	29.649	NaN	13092	30	0	1099.6	0.106	+			477	AAVSTHVAL	9	78	434.7475708092853	NaN	0	434.74774169921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AAVSTHVAL_	ENSG00000163501|ENST00000295731|IHH;IHH|p.E379Rfs*18|2|0.25|ENSG00000163501|chr2:219055308-219055308|C/-|frameshift_variant;IHH|p.Q386Sfs*11|1|0.4|ENSG00000163501|chr2:219055287-219055287|G/-|frameshift_variant	94.00642277110589	0.0335199496031268	6				NaN	NaN	0	NaN	7592	3292	10882
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10887	29.651	NaN	37411	30	0	6446.1	0.106			+	7864	DREQEAQQK	9	92	566.2737268527392	1130.5329007722783	2	566.2757568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DREQEAQQK_	REV__ENSG00000122952|ENST00000373944|ZWINT	79.45101966838831	0.09992237243120712	6				NaN	NaN	0	NaN	7593	3292	10882
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10888	29.653	NaN	17142	30	0	3176.1	0.106			+	36750	SHGSLARSML	10	111	358.8503634734417	1073.5292610205252	3	358.8515319824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_SHGSLARSM(Oxidation (M))L_	REV__ENST00000314830.12_1_9:130536661-130540970:-|nuORF;REV__ENST00000468969.6_1_9:130536689-130540970:-|nuORF	42.33807565288922	0.5276008846745733	6				NaN	NaN	0	NaN	7594	3292	10882
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10889	29.655	NaN	43656	30	0	8602.8	0.035			+	7520	DGQSPSARAGV	11	94	522.7574580463992	1043.5003631595982	2	522.7590942382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DGQSPSARAGV_	REV__ENSG00000148516|ENST00000424869|ZEB1;REV__ENST00000488625.6_1_10:31676182-31816189:+|nuORF;REV__nc|ENSG00000148516|P37275-3|ZEB1;REV__nc|ENSG00000148516|P37275-4|ZEB1;REV__nc|ENSG00000148516|P37275-5|ZEB1;REV__nc|ENSG00000148516|P37275|ZEB1;REV__ZEB1|p.K1058Nfs*20|1|0.36|ENSG00000148516|chr10:31527059-31527059|A/-|frameshift_variant	61.691277971877994	0.30835813808799384	6				NaN	NaN	0	NaN	7595	3292	10882
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10907	29.691	NaN	23578	30	0	2736.2	0.214	+			17019	HPTSVISGY	9	88	480.7422990200296	959.4700451068592	2	480.7427062988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HPTSVISGY_	ENSG00000120438|ENST00000321394|TCP1;ENST00000412860.1_1_7:42834686-42835559:+|nuORF;TCP1|p.A232Gfs*7|1|0.05|ENSG00000120438|chr6:159784043-159784044|-/C|frameshift_variant	76.84663266511073	0.11118375776443899	6				NaN	NaN	0	NaN	7610	3295	10906
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10908	29.695	NaN	7911.8	30	0	828.23	0.106	+			9342	EIMSYQIW	8	68	535.2542825302621	1068.4940121273241	2	535.2562866210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EIMSYQIW_	CSTF3|p.D250Efs*28|1|0.05|ENSG00000176102|chr11:33102253-33102254|-/GGTTACTAAAATTT|frameshift_variant;CSTF3|p.K439Nfs*33|4|0.35|ENSG00000176102|chr11:33096364-33096364|T/-|frameshift_variant;CSTF3|p.M205Nfs*3|1|0.32|ENSG00000176102|chr11:33103156-33103157|-/T|frameshift_variant;CSTF3|p.R275Efs*40|1|0.38|ENSG00000176102|chr11:33102180-33102180|T/-|frameshift_variant;ENSG00000176102|ENST00000323959|CSTF3	65.80317337860623	0.44433089765398776	6				NaN	NaN	0	NaN	7611	3295	10906
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10909	29.697	NaN	20246	30	0	4744.9	0.106			+	-1	ISMHIKKG	8	71	465.26399698248014	928.5134410317603	2	465.2635803222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_ISM(Oxidation (M))HIKKG_	REV__ENST00000256079.8_1_12:30822128-30822167:-|nuORF	42.47446043378293	0.6409579893742323	6				NaN	NaN	0	NaN	7612	3295	10906
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10910	29.699	NaN	10869	30	0	1954.5	0.106				-1	 	0	74	376.22014885701606	375.21287239041607	1	376.2216491699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7613	3295	10906
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10911	29.701	NaN	23619	30	0	5800.3	0.106	+			37282	SLAKSKSKKE	10	95	553.3327443317946	1104.6509357303892	2	553.3348999023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SLAKSKSKKE_	ENST00000535789.1_1_11:63437843-63437963:-|nuORF	62.107414245175825	0.3466735403679669	6				NaN	NaN	0	NaN	7614	3295	10906
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10912	29.702	NaN	13279	30	0	2776.6	0.037			+	-1	ACCGPRPKPV	10	91	362.1843887918617	1083.531336975785	3	362.18548583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_AC(Carbamidomethyl (C))CGPRPKPV_	REV__ENSG00000092421|ENST00000343348|SEMA6A;REV__ENSG00000137872|ENST00000536845|SEMA6D;REV__nc|ENSG00000092421|Q9H2E6-2|SEMA6A;REV__nc|ENSG00000137872|Q8NFY4-2|SEMA6D;REV__nc|ENSG00000137872|Q8NFY4-3|SEMA6D;REV__nc|ENSG00000137872|Q8NFY4-4|SEMA6D;REV__nc|ENSG00000137872|Q8NFY4-5|SEMA6D;REV__nc|ENSG00000137872|Q8NFY4-6|SEMA6D;REV__nc|ENSG00000137872|Q8NFY4-7|SEMA6D;REV__nc|ENSG00000137872|Q8NFY4-8|SEMA6D;REV__SEMA6A|p.K1013Nfs*11|1|0.19|ENSG00000092421|chr5:116446670-116446670|G/-|frameshift_variant;REV__SEMA6A|p.K1013Qfs*15|1|0.45|ENSG00000092421|chr5:116446669-116446670|-/G|frameshift_variant;REV__SEMA6A|p.N990Mfs*8|1|0.1|ENSG00000092421|chr5:116446737-116446738|-/GTACA|frameshift_variant;REV__SEMA6A|p.R918Efs*23|1|0.25|ENSG00000092421|chr5:116446955-116446956|-/T|frameshift_variant;REV__SEMA6A|p.V881Ffs*20|2|0.21|ENSG00000092421|chr5:116447069-116447069|G/-|frameshift_variant;REV__SEMA6D|p.K486Rfs*51|1|0.26|ENSG00000137872|chr15:47765894-47765894|A/-|frameshift_variant	30.317721548370564	0.6322445173429027	6				NaN	NaN	0	NaN	7615	3295	10906
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10913	29.703	NaN	15283	30	0	2042.3	0.141	+			1437	AEYGPQGRAF	10	77	548.2632294042477	1094.5119058752953	2	548.2650146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AEYGPQGRAF_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	72.87924865735499	0.25379688738724415	6				NaN	NaN	0	NaN	7616	3295	10906
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10931	29.742	NaN	74054	30	0	29524	0.188				-1	CVEGCFCPE	9	91	579.2078056293192	1156.4010583254383	2	579.2100219726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	3 Carbamidomethyl (C)	_C(Carbamidomethyl (C))VEGC(Carbamidomethyl (C))FC(Carbamidomethyl (C))PE_	nc|ENSG00000197558|A2VEC9-2|SSPOP;nc|ENSG00000197558|A2VEC9|SSPOP	55.50420428727701	0.2510918378945873	6				NaN	NaN	0	NaN	7631	3298	10930
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10932	29.745	NaN	42143	30	0	8092	0.106			+	45191	TVNGDFCGKY	10	105	580.7550617405203	1159.4955705478405	2	580.7576293945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_TVNGDFC(Carbamidomethyl (C))GKY_	REV__ENSG00000124466|ENST00000244333|LYPD3	52.936696900407355	0.4300801048568001	6				NaN	NaN	0	NaN	7632	3298	10930
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10933	29.747	NaN	13827	30	0	1053.9	0.106				-1	 	0	86	550.307359428106	1098.600165923012	2	550.309326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7633	3298	10930
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10934	29.749	NaN	16428	30	0	3830.9	0.106			+	48220	VTAVAEQYQP	10	84	553.2796194596305	1104.5446859860608	2	553.2819213867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTAVAEQYQP_	REV__ENSG00000090975|ENST00000320201|PITPNM2;REV__nc|ENSG00000090975|Q9BZ72-2|PITPNM2;REV__nc|ENSG00000090975|Q9BZ72-3|PITPNM2;REV__PITPNM2|p.S819Pfs*140|1|0.47|ENSG00000090975|chr12:122990660-122990660|G/-|frameshift_variant	75.04331003522576	0.23611669241777622	6				NaN	NaN	0	NaN	7634	3298	10930
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10935	29.751	NaN	20376	30	0	1757.2	0.106	+			11640	FQGGWDLSL	9	93	511.74960305896025	1021.4846531847205	2	511.7513122558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FQGGWDLSL_	ENST00000334274.8_2_11:33094419-33094551:+|nuORF	66.42927471994793	0.16001998865088202	6				NaN	NaN	0	NaN	7635	3298	10930
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10936	29.752	NaN	21316	30	0	7808.2	0.106				-1	 	0	67	468.7594775509871	935.5044021687743	2	468.7608337402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7636	3298	10930
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10937	29.754	NaN	10180	30	0	1494.3	0.035				-1	LVCGGGCRL	9	81	496.2442222130224	990.4738914928448	2	496.24554443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C)	_LVC(Carbamidomethyl (C))GGGC(Carbamidomethyl (C))RL_	ENST00000433446.1_1_7:86781523-86781595:-|nuORF	42.47446043378293	0.39123495718708534	6				NaN	NaN	0	NaN	7637	3298	10930
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10955	29.792	NaN	847320	30	0	335670	0.125				-1	 	0	71	526.7885792286284	1051.5626055240566	2	526.7907104492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7652	3301	10954
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10956	29.794	NaN	17002	30	0	1919	0.106	+			11751	FSHQGVQL	8	80	458.2366382898592	914.4587236465184	2	458.2373962402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FSHQGVQL_	ENSG00000106263|ENST00000360876|EIF3B;ENST00000463026.5_1_7:2404000-2406084:+|nuORF;nc|ENSG00000106263|P55884-2|EIF3B	93.19546047674547	0.2677966331495483	6				NaN	NaN	0	NaN	7653	3301	10954
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10957	29.796	NaN	22449	30	0	9934.6	0.106				-1	 	0	89	353.91335607893694	1058.7182388370109	3	353.9143981933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7654	3301	10954
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10958	29.798	NaN	24744	30	0	2701.8	0.106				-1	 	0	94	518.2859580113068	1034.5573630894135	2	518.28759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7655	3301	10954
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10959	29.8	NaN	9804.3	30	0	1000.2	0.106				-1	 	0	68	440.24894657956975	878.4833402259395	2	440.25006103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7656	3301	10954
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10960	29.802	NaN	15700	30	0	1092.7	0.106			+	46447	VESITLTVVY	10	88	562.3137672878141	1122.6129816424282	2	562.3168334960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VESITLTVVY_	REV__DMGDH|p.S276L|1|0.29|ENSG00000132837|chr5:79044471-79044471|G/A|missense_variant	47.657333605630114	0.47858658696240314	6				NaN	NaN	0	NaN	7657	3301	10954
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10961	29.803	NaN	23639	30	0	4168.1	0.035	+			37824	SMPGVLTMI	9	104	511.74960305896025	1021.4846531847205	2	511.7516784667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term),2 Oxidation (M)	_(Acetyl (Protein N-term))SM(Oxidation (M))PGVLTM(Oxidation (M))I_	ENST00000392452.2_1_3:192517247-192517334:-|nuORF	63.30626980617807	0.18605348971131092	6				NaN	NaN	0	NaN	7658	3301	10954
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10979	29.84	NaN	134400	30	0	36216	0.163				-1	 	0	83	493.76531953967594	985.5160861461519	2	493.7666931152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7673	3304	10978
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10980	29.842	NaN	15898	30	0	11386	0.106	+			34254	RTGSGKNL	8	55	416.73593216665483	831.4573114001097	2	416.73724365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RTGSGKNL_	ENSG00000164142|ENST00000435205|FHIP1A	29.14955571784316	0.7342621283720113	6				NaN	NaN	0	NaN	7674	3304	10978
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10981	29.845	NaN	9226.6	30	0	1549.4	0.106				-1	 	0	69	430.2646543946412	858.5147558560824	2	430.2657775878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7675	3304	10978
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10982	29.846	NaN	15474	30	0	2361.1	0.106	+			5672	AVDSQILPK	9	88	485.7809244386719	969.5472959441438	2	485.7816467285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVDSQILPK_	ENSG00000089009|ENST00000202773|RPL6;ENST00000456481.1_1_7:137407104-137407545:+|nuORF;ENST00000489915.1_1_18:6462145-6462637:-|nuORF	72.87924865735499	0.12833875048249987	6				NaN	NaN	0	NaN	7676	3304	10978
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10983	29.848	NaN	12297	30	0	1734.6	0.106	+			22119	KSNSFLKAL	9	81	336.5344378546052	NaN	0	336.53424072265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KSNSFLKAL_	STK38|p.F382Lfs*70|1|0.16|ENSG00000112079|chr6:36497806-36497806|A/-|frameshift_variant	26.69291269510374	0.34280015626154364	6				NaN	NaN	0	NaN	7677	3304	10978
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10984	29.85	NaN	11220	30	0	1623.1	0.106	+			20427	KETTGIVSM	9	87	483.25190157183647	964.489250210473	2	483.2520751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KETTGIVSM_	ENSG00000136631|ENST00000644510|VPS45;ENST00000460366.5_1_1:150039914-150049098:+|nuORF;ENST00000497638.2_1_1:150039914-150048408:+|nuORF	75.04331003522576	0.118981335847003	6				NaN	NaN	0	NaN	7678	3304	10978
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	10985	29.852	NaN	11134	30	0	1782.3	0.034			+	26931	LYGCHRGM	8	72	468.71272432362304	935.4108957140461	2	468.7136535644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LYGCHRGM_	REV__ENSG00000067057|ENST00000381125|PFKP;REV__ENSG00000141959|ENST00000349048|PFKL;REV__ENSG00000152556|ENST00000359794|PFKM;REV__ENST00000397961.6_1_21:45725201-45746742:+|nuORF;REV__ENST00000466134.5_1_21:45719988-45734072:+|nuORF;REV__ENST00000546964.5_1_12:48513149-48528944:+|nuORF;REV__nc|ENSG00000067057|Q01813-2|PFKP;REV__nc|ENSG00000141959|P17858-2|PFKL;REV__nc|ENSG00000152556|P08237-2|PFKM;REV__nc|ENSG00000152556|P08237-3|PFKM;REV__PFKL|p.P704Qfs*6|1|0.29|ENSG00000141959|chr21:44326177-44326177|C/-|frameshift_variant;REV__PFKM|p.A266Efs*59|1|0.04|ENSG00000152556|chr12:48134991-48134992|-/AGGGATTT|frameshift_variant;REV__PFKP|p.R265Gfs*2|3|0.32|ENSG00000067057|chr10:3107226-3107226|A/-|frameshift_variant	44.53106598305862	0.628196326904373	6				NaN	NaN	0	NaN	7679	3304	10978
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11003	29.889	NaN	15570	30	0	5808.3	0.214			+	12368	GDREDILQ	8	75	473.2358456737544	944.4571384143088	2	473.23699951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GDREDILQ_	REV__ENSG00000143341|ENST00000271588|HMCN1;REV__HMCN1|p.G3718Afs*6|1|0.04|ENSG00000143341|chr1:186113995-186113995|G/-|frameshift_variant;REV__HMCN1|p.L3491Hfs*10|1|0.12|ENSG00000143341|chr1:186095419-186095420|-/ATAT|frameshift_variant;REV__HMCN1|p.S4801Rfs*11|1|0.07|ENSG00000143341|chr1:186145536-186145537|-/AGAATAA|frameshift_variant;REV__HMCN1|p.Y2955Ifs*3|1|0.29|ENSG00000143341|chr1:186082933-186082934|-/A|frameshift_variant;REV__nc|ENSG00000143341|Q96RW7-2|HMCN1	37.15910966729921	0.6739408393984688	6				NaN	NaN	0	NaN	7694	3307	11002
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11004	29.893	NaN	11611	30	0	2728.4	0.106			+	26995	LYNTGDLLL	9	88	511.2807133189652	1020.5468737047304	2	511.2815246582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LYNTGDLLL_	REV__tr|U7SKZ9|U7SKZ9_FUSNUABCtransporterATP-bindingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02010PE=4SV=1	82.30502934623384	0.08758161712619916	6				NaN	NaN	0	NaN	7695	3307	11002
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11005	29.895	NaN	8362.7	30	0	643.09	0.106	+			36547	SFKQRSDLF	9	73	564.2974930461847	1126.5804331591694	2	564.2957153320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SFKQRSDLF_	ENSG00000160908|ENST00000337673|ZNF394;ENSG00000160908|ENST00000337673|ZNF394	87.69643885390035	0.07135982304947239	6				NaN	NaN	0	NaN	7696	3307	11002
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11006	29.897	NaN	10681	30	0	939.65	0.106			+	2395	ANTFQRLKT	9	83	539.8041621042833	1077.5937712753664	2	539.8056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ANTFQRLKT_	REV__ENSG00000132613|ENST00000338779|MTSS2;REV__nc|ENSG00000132613|Q765P7-2|MTSS2	53.351449002276354	0.2690372970092375	6				NaN	NaN	0	NaN	7697	3307	11002
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11007	29.899	NaN	5496.6	30	0	450.08	0.106	+			19879	KEEQFKQVF	9	82	591.810274859222	1181.6059967852439	2	591.8115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEEQFKQVF_	ENSG00000168090|ENST00000303904|COPS6;ENST00000496358.1_1_7:99686670-99688376:+|nuORF	48.601550744091256	0.3193666407755445	6				NaN	NaN	0	NaN	7698	3307	11002
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11008	29.9	NaN	13149	30	0	2173.8	0.036			+	45026	TVFSGFTVNH	10	85	554.7750243773177	1107.5354958214352	2	554.7764282226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TVFSGFTVNH_	REV__ENSG00000030304|ENST00000374448|MUSK;REV__nc|ENSG00000030304|O15146-2|MUSK;REV__nc|ENSG00000030304|O15146-3|MUSK	82.24051045832904	0.17731618517892733	6				NaN	NaN	0	NaN	7699	3307	11002
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11009	29.901	NaN	5055.6	30	0	1109.8	0.14	+			12229	GASDVVLYK	9	60	476.2591335058442	950.5037140784884	2	476.2604675292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GASDVVLYK_	ENSG00000116120|ENST00000281828|FARSB;FARSB|p.I265*|1|0.36|ENSG00000116120|chr2:222630168-222630168|T/-|frameshift_variant;FARSB|p.I364Nfs*7|1|0.04|ENSG00000116120|chr2:222624353-222624354|-/AACACTCCTTATTG|frameshift_variant	69.6276240434122	0.14239879520340665	6				NaN	NaN	0	NaN	7700	3307	11002
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11027	29.94	NaN	28292	30	0	2885.1	0.214				-1	 	0	92	496.8090232207282	991.6034935082564	2	496.8103332519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7715	3310	11026
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11028	29.944	NaN	11588	30	0	1242.3	0.106			+	29796	PITYNPNDL	9	84	523.7611433268324	1045.5077337204648	2	523.7630004882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PITYNPNDL_	REV__AGTPBP1|p.K1079Nfs*10|1|0.38|ENSG00000135049|chr9:85579025-85579025|T/-|frameshift_variant;REV__AGTPBP1|p.S1080Ifs*2|1|0.29|ENSG00000135049|chr9:85579024-85579025|-/T|frameshift_variant;REV__ENSG00000135049|ENST00000357081|AGTPBP1;REV__nc|ENSG00000135049|Q9UPW5-2|AGTPBP1;REV__nc|ENSG00000135049|Q9UPW5-3|AGTPBP1	84.9155231211612	0.07920012719736333	6				NaN	NaN	0	NaN	7716	3310	11026
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11029	29.946	NaN	14433	30	0	910.6	0.106	+			30818	QEEKIAALQ	9	80	515.2825844282987	1028.5506159233973	2	515.2833862304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QEEKIAALQ_	ENSG00000197694|ENST00000372739|SPTAN1;nc|ENSG00000197694|Q13813-3|SPTAN1;nc|ENSG00000197694|Q13813|SPTAN1	37.81151784470057	0.4459294069877048	6				NaN	NaN	0	NaN	7717	3310	11026
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11030	29.948	NaN	14851	30	0	3194.7	0.106			+	50766	YEKNSFPL	8	85	499.2526686289387	996.4907843246774	2	499.2543029785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YEKNSFPL_	REV__ENSG00000155561|ENST00000285968|NUP205;REV__NUP205|p.F1204Lfs*34|1|0.12|ENSG00000155561|chr7:135617163-135617163|T/-|frameshift_variant;REV__NUP205|p.Q1211Kfs*27|1|0.25|ENSG00000155561|chr7:135617188-135617188|C/-|frameshift_variant	53.351449002276354	0.5676011784961348	6				NaN	NaN	0	NaN	7718	3310	11026
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11031	29.95	NaN	23438	30	0	1368.3	0.106				-1	FQEMAKNIQ	9	96	562.7725752460349	1123.5305975588697	2	562.7742309570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_FQEM(Oxidation (M))AKNIQ_	tr|U7SVT4|U7SVT4_FUSNUMolybdatetransportsystemsubstrate-bindingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01334PE=4SV=1	95.81516180277367	0.04847050768394289	6				NaN	NaN	0	NaN	7719	3310	11026
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11032	29.952	NaN	14415	30	0	2786.5	0.035	+			18644	ISTNSHPIL	9	79	491.27137393911414	NaN	0	491.2716979980469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ISTNSHPIL_	ENSG00000138081|ENST00000403359|FBXO11;nc|ENSG00000138081|Q86XK2-5|FBXO11;nc|ENSG00000138081|Q86XK2-6|FBXO11	110.11987700582712	0.00958887139988123	6				NaN	NaN	0	NaN	7720	3310	11026
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11033	29.952	NaN	9248.5	30	0	1140.2	0.14	+			24006	LECSETSKL	9	83	505.2493662414518	1008.4841795497036	2	505.2513427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LECSETSKL_	ENST00000475700.1_1_1:112309433-112309511:+|nuORF	49.536043120802724	0.308405419312776	6				NaN	NaN	0	NaN	7721	3310	11026
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11051	29.99	NaN	27877	30	0	3017.3	0.214	+			6029	AVMEMMSQK	9	84	527.738324136745	1053.4620953402898	2	527.740478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVMEMMSQK_	ENSG00000123349|ENST00000334478|PFDN5;ENST00000552341.5_1_12:53691573-53693126:+|nuORF;nc|ENSG00000123349|Q99471-3|PFDN5	90.60085204095205	0.06317133949006545	6				NaN	NaN	0	NaN	7736	3313	11050
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11052	29.994	NaN	35989	30	0	23670	0.106				-1	 	0	78	480.2782781799936	958.5420034267872	2	480.27935791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7737	3313	11050
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11053	29.996	NaN	23260	30	0	6911.1	0.106				-1	 	0	55	425.2439187183798	848.4732845035596	2	425.2448425292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7738	3313	11050
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11054	29.998	NaN	15275	30	0	2388.1	0.106	+			49786	VYRQDCETF	9	89	580.7550617405203	1159.4955705478405	2	580.75634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VYRQDCETF_	ENSG00000134283|ENST00000358314|PPHLN1;nc|ENSG00000134283|Q8NEY8-2|PPHLN1;nc|ENSG00000134283|Q8NEY8-3|PPHLN1;nc|ENSG00000134283|Q8NEY8-6|PPHLN1;nc|ENSG00000134283|Q8NEY8-9|PPHLN1;nc|ENSG00000134283|Q8NEY8|PPHLN1;PPHLN1|p.D323Ifs*4|1|0.17|ENSG00000134283|chr12:42441367-42441367|A/-|frameshift_variant	132.757866228626	0.013877640931359021	6				NaN	NaN	0	NaN	7739	3313	11050
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11055	29.999	NaN	17246	30	0	3354.5	0.106				-1	 	0	82	401.2150232362552	800.4154935393104	2	401.2162170410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7740	3313	11050
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11056	30.001	NaN	13291	30	0	2045.9	0.035	+			47778	VSHLRGSNR	9	77	513.2835219714681	1024.552491009736	2	513.284912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VSHLRGSNR_	ENSG00000127329|ENST00000334414|PTPRB;nc|ENSG00000127329|P23467-2|PTPRB;nc|ENSG00000127329|P23467-4|PTPRB;nc|ENSG00000127329|P23467|PTPRB;PTPRB|p.P1449Lfs*9|1|0.31|ENSG00000127329|chr12:70555303-70555303|G/-|frameshift_variant	37.81151784470057	0.4459294069877048	6				NaN	NaN	0	NaN	7741	3313	11050
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11057	30.002	NaN	7793.7	30	0	1035.1	0.141	+			40478	STWEGIQAGK	10	77	538.7707502321852	1075.5269475311702	2	538.772216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STWEGIQAGK_	ENSG00000177156|ENST00000319006|TALDO1;ENST00000530119.5_1_11:747481-760254:+|nuORF;ENST00000533796.1_1_11:755745-760254:+|nuORF;nc|ENSG00000177156|P37837-2|TALDO1	123.20810148215591	0.02279876478776198	6				NaN	NaN	0	NaN	7742	3313	11050
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11075	30.041	NaN	29209	30	0	2838.8	0.214			+	19170	IYRPGPNL	8	92	465.26399698248014	928.5134410317603	2	465.26751708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IYRPGPNL_	REV__ENSG00000162687|ENST00000294725|KCNT2;REV__ENST00000498426.5_1_1:196286396-196434478:-|nuORF;REV__ENST00000610076.1_1_1:196227273-196577439:-|nuORF;REV__nc|ENSG00000162687|Q6UVM3-2|KCNT2;REV__nc|ENSG00000162687|Q6UVM3-3|KCNT2;REV__nc|ENSG00000162687|Q6UVM3-4|KCNT2	47.91560031466742	0.6071945918984287	6				NaN	NaN	0	NaN	7757	3316	11074
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11076	30.045	NaN	20583	30	0	2025	0.106				-1	 	0	74	436.2703069997073	870.5260610662147	2	436.2716979980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7758	3316	11074
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11077	30.047	NaN	16183	30	0	4619.4	0.106				-1	SFKHCWKM	8	80	570.2596492731401	1138.50474561308	2	570.2617797851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_SFKHC(Carbamidomethyl (C))WKM(Oxidation (M))_	ENSG00000101977|ENST00000519895|MCF2;MCF2|p.R820Kfs*12|1|0.54|ENSG00000101977|chrX:139587779-139587780|-/T|frameshift_variant;nc|ENSG00000101977|P10911-2|MCF2;nc|ENSG00000101977|P10911-3|MCF2;nc|ENSG00000101977|P10911-4|MCF2;nc|ENSG00000101977|P10911-6|MCF2;nc|ENSG00000101977|P10911|MCF2	63.30626980617807	0.4690498839812213	6				NaN	NaN	0	NaN	7759	3316	11074
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11078	30.049	NaN	18543	30	0	2204.8	0.106	+			35874	SEDSHLESL	9	88	508.7288797420585	1015.443206550917	2	508.7304382324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SEDSHLESL_	ENSG00000047849|ENST00000683076|MAP4;MAP4|p.R919Gfs*14|1|0.44|ENSG00000047849|chr3:47870917-47870917|G/-|frameshift_variant;MAP4|p.T960Qfs*35|1|0.3|ENSG00000047849|chr3:47869309-47869309|T/-|frameshift_variant;MAP4|p.V999*|1|0.25|ENSG00000047849|chr3:47867318-47867318|T/-|frameshift_variant;nc|ENSG00000047849|P27816-6|MAP4;nc|ENSG00000047849|P27816|MAP4	120.62098272573253	0.020823834273767324	6				NaN	NaN	0	NaN	7760	3316	11074
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11079	30.051	NaN	31783	30	0	5235.4	0.106			+	49062	VVKEGSDRLQ	10	86	565.8124530413824	1129.6103531495646	2	565.8145751953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VVKEGSDRLQ_	REV__ENSG00000175467|ENST00000312397|SART1	80.45461616416974	0.1919067876629769	6				NaN	NaN	0	NaN	7761	3316	11074
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11080	30.052	NaN	12651	30	0	1109.7	0.035			+	25824	LSDHISKFG	9	85	502.26472793608315	1002.5149029389663	2	503.2720642089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSDHISKFG_	REV__ENSG00000153347|ENST00000283357|FAM81B	34.172542307311794	0.4838870758800184	6				NaN	NaN	0	NaN	7762	3316	11074
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11081	30.053	NaN	13882	30	0	4416.4	0.14			+	-1	LYGLMVILD	9	76	526.7885792286284	1051.5626055240566	2	526.791259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_LYGLM(Oxidation (M))VILD_	REV__ENSG00000143669|ENST00000389793|LYST	40.5726180659479	0.4135428067754104	6				NaN	NaN	0	NaN	7763	3316	11074
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11099	30.092	NaN	49791	30	0	9459.9	0.215	+			5114	ATSRGTDIR	9	86	488.7626577409798	975.5107625487597	2	488.7638854980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSRGTDIR_	ENSG00000214160|ENST00000397676|ALG3;ENST00000414845.5_1_3:183961725-183966669:-|nuORF;ENST00000461415.5_1_3:183962900-183966669:-|nuORF;ENST00000482048.1_1_3:183962900-183966716:-|nuORF;ENST00000488976.5_1_3:183962900-183966721:-|nuORF;nc|ENSG00000214160|Q92685-2|ALG3	65.46538089061403	0.16805504838372562	6				NaN	NaN	0	NaN	7778	3319	11098
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11100	30.096	NaN	58593	30	0	12370	0.106			+	48306	VTEGSVNQVP	10	94	515.2648827342572	1028.5152125353143	2	515.2662353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTEGSVNQVP_	REV__ENSG00000103479|ENST00000262133|RBL2;REV__ENST00000562837.1_1_16:53500972-53504120:+|nuORF	118.74307786436346	0.029104951601466193	6				NaN	NaN	0	NaN	7779	3319	11098
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11101	30.098	NaN	21214	30	0	5125	0.106			+	3541	ASSTLATRQ	9	83	467.7518452249603	933.4891375167206	2	467.7528991699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASSTLATRQ_	REV__ENST00000359906.6_1_22:42896676-42905109:+|nuORF;REV__ENST00000527167.5_1_22:42952032-42967202:+|nuORF;REV__nc|ENSG00000293485|Q9NQF3|SERHL	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	7780	3319	11098
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11102	30.1	NaN	15101	30	0	2005.5	0.106	+			19950	KEFQEASAL	9	82	511.7600206639814	1021.5054883947628	2	511.7614440917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KEFQEASAL_	ENSG00000178623|ENST00000407714|GPR35;nc|ENSG00000178623|Q9HC97-2|GPR35	76.16968421966216	0.11411088698345859	6				NaN	NaN	0	NaN	7781	3319	11098
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11103	30.102	NaN	40152	30	0	5281	0.106	+			30699	QDAKMAGIGI	10	91	502.26472793608315	1002.5149029389663	2	502.2655334472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QDAKMAGIGI_	CON__P19012	87.69643885390035	0.14426223466775756	6				NaN	NaN	0	NaN	7782	3319	11098
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11104	30.103	NaN	16345	30	0	1571.4	0.035				-1	 	0	79	491.780406514999	981.546260096798	2	491.7817077636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7783	3319	11098
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11105	30.104	NaN	39019	30	0	6270.1	0.141			+	44202	TRGKGRAGYT	10	92	533.7913249650742	1065.5680969969483	2	533.7928466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TRGKGRAGYT_	REV__ENSG00000075856|ENST00000546815|SART3;REV__nc|ENSG00000075856|Q15020-4|SART3	71.87747018426188	0.26198133118427214	6				NaN	NaN	0	NaN	7784	3319	11098
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11123	30.141	NaN	83610	30	0	31771	0.18				-1	IHQCISINM	9	94	537.7574352359884	1073.5003175387767	2	537.7593994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_IHQCISINM(Oxidation (M))_	ENSG00000104408|ENST00000220849|EIF3E	63.30626980617807	0.18605348971131092	6				NaN	NaN	0	NaN	7799	3322	11122
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11124	30.144	NaN	22453	30	0	3149.3	0.106	+			43445	TGLSLCTPVT	10	78	496.2593264037982	990.5040998743964	2	496.75787353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TGLSLCTPVT_	ENSG00000213024|ENST00000352066|NUP62	66.42927471994793	0.3073667423445326	6				NaN	NaN	0	NaN	7800	3322	11122
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11125	30.146	NaN	14704	30	0	3323.7	0.106			+	4693	ATLSLTAWG	9	72	460.24819649251015	918.4818400518203	2	460.2496643066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATLSLTAWG_	REV__ENST00000257215.9_1_11:61512188-61512554:+|nuORF	90.77665401227738	0.06267569666681755	6				NaN	NaN	0	NaN	7801	3322	11122
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11126	30.148	NaN	6140.2	30	0	491.52	0.106	+			8392	EANFFTSQMI	10	67	594.273520198713	1186.5324874642258	2	594.2762451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EANFFTSQMI_	ENSG00000127054|ENST00000435064|INTS11;ENST00000488042.6_1_1:1250056-1259988:-|nuORF;ENST00000496353.1_1_1:1254237-1254918:-|nuORF;nc|ENSG00000127054|Q5TA45-3|INTS11;nc|ENSG00000127054|Q5TA45-4|INTS11;nc|ENSG00000127054|Q5TA45-5|INTS11	65.46538089061403	0.31613324008013116	6				NaN	NaN	0	NaN	7802	3322	11122
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11127	30.15	NaN	17426	30	0	2661.1	0.106			+	-1	MLMFGSEYGP	10	78	574.2432613324947	1146.4719697317894	2	574.2455444335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_M(Oxidation (M))LMFGSEYGP_	REV__ENSG00000142449|ENST00000600128|FBN3;REV__FBN3|p.C1223Afs*11|1|0.23|ENSG00000142449|chr19:8116720-8116720|C/-|frameshift_variant;REV__FBN3|p.G1440Vfs*14|1|0.37|ENSG00000142449|chr19:8110859-8110859|C/-|frameshift_variant;REV__FBN3|p.G1577Vfs*72|2|0.29|ENSG00000142449|chr19:8106191-8106191|C/-|frameshift_variant;REV__FBN3|p.G2797Afs*4|1|0.38|ENSG00000142449|chr19:8065959-8065959|C/-|frameshift_variant;REV__FBN3|p.P1958Lfs*128|1|0.24|ENSG00000142449|chr19:8094478-8094478|G/-|frameshift_variant;REV__FBN3|p.T2578Pfs*120|1|0.39|ENSG00000142449|chr19:8073269-8073269|G/-|frameshift_variant	45.9519527083369	0.4943008177357963	6				NaN	NaN	0	NaN	7803	3322	11122
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11128	30.152	NaN	9908.7	30	0	776.37	0.106	+			838	AEGIVNGHTL	10	83	505.76521467930587	1009.5158764254118	2	505.7667236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEGIVNGHTL_	ENSG00000109911|ENST00000640961|ELP4;nc|ENSG00000109911|Q96EB1-2|ELP4;nc|ENSG00000109911|Q96EB1-3|ELP4	86.88156770896713	0.14892753630261096	6				NaN	NaN	0	NaN	7804	3322	11122
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11129	30.153	NaN	7968	30	0	762.18	0.036	+			38496	SSATLNSIVAK	11	85	545.806402292878	1089.598251652556	2	545.8084716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSATLNSIVAK_	ENSG00000007944|ENST00000356840|MYLIP;MYLIP|p.K199Rfs*26|1|0.07|ENSG00000007944|chr6:16143150-16143151|-/GAATT|frameshift_variant;MYLIP|p.R317Kfs*8|1|0.09|ENSG00000007944|chr6:16145014-16145015|-/A|frameshift_variant	65.2775769800794	0.27634548443598095	6				NaN	NaN	0	NaN	7805	3322	11122
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11147	30.19	NaN	25086	30	0	2668.2	0.214	+			9686	ELWPLQPW	8	99	534.7806718660838	1067.5467907989675	2	534.7826538085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ELWPLQPW_	ENST00000487078.5_1_2:27280298-27281376:+|nuORF	65.80317337860623	0.44433089765398776	6				NaN	NaN	0	NaN	7820	3325	11146
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11148	30.194	NaN	21243	30	0	4566.2	0.106	+			6878	CLKSEVKMQ	9	83	541.2732995607976	1080.532046188395	2	541.2752075195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_CLKSEVKM(Oxidation (M))Q_	ENSG00000136811|ENST00000351030|ODF2;nc|ENSG00000136811|Q5BJF6-10|ODF2;nc|ENSG00000136811|Q5BJF6-2|ODF2;nc|ENSG00000136811|Q5BJF6-3|ODF2;nc|ENSG00000136811|Q5BJF6-4|ODF2;nc|ENSG00000136811|Q5BJF6-5|ODF2;nc|ENSG00000136811|Q5BJF6-6|ODF2;nc|ENSG00000136811|Q5BJF6-7|ODF2;nc|ENSG00000136811|Q5BJF6-8|ODF2;nc|ENSG00000136811|Q5BJF6|ODF2	84.9155231211612	0.07920012719736333	6				NaN	NaN	0	NaN	7821	3325	11146
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11149	30.196	NaN	9574.9	30	0	636.98	0.106	+			50139	WIQPPGRSC	9	71	522.2588031002404	1042.5030532672806	2	522.2615356445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_WIQPPGRSC_	ENST00000423902.6_1_8:61591404-61653838:+|nuORF	54.776311868738084	0.25715957988447635	6				NaN	NaN	0	NaN	7822	3325	11146
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11150	30.198	NaN	8676.2	30	0	1257.1	0.106	+			27823	MSQVLDCIF	9	80	528.2474083416229	1054.4802637500457	2	528.2490844726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MSQVLDCIF_	ACACB|p.L1398Sfs*26|1|0.18|ENSG00000076555|chr12:109233795-109233795|C/-|frameshift_variant;ACACB|p.T1476Hfs*7|1|0.28|ENSG00000076555|chr12:109235620-109235621|-/T|frameshift_variant;ENSG00000076555|ENST00000338432|ACACB;nc|ENSG00000076555|O00763-3|ACACB	52.936696900407355	0.27249468807391813	6				NaN	NaN	0	NaN	7823	3325	11146
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11151	30.2	NaN	33424	30	0	7217.4	0.106				-1	 	0	95	572.338728121768	1142.6629033103359	2	572.3404541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7824	3325	11146
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11152	30.201	NaN	11151	30	0	1140.7	0.037	+			29349	NYVKKFQSF	9	80	580.8063695830966	1159.5981862329932	2	580.80712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NYVKKFQSF_	ENSG00000109536|ENST00000226798|FRG1;ENST00000278882.8_1_20:29623179-29633907:+|nuORF	85.16082228582465	0.07850854922700509	6				NaN	NaN	0	NaN	7825	3325	11146
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11153	30.202	NaN	7671.9	30	0	1228.6	0.143	+			8010	DTLRVPPPL	9	72	336.5344378546052	NaN	0	336.5342102050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DTLRVPPPL_	EGR2|p.G275Afs*6|2|0.44|ENSG00000122877|chr10:62813814-62813814|C/-|frameshift_variant;EGR2|p.S277Vfs*4|1|0.09|ENSG00000122877|chr10:62813810-62813810|G/-|frameshift_variant;EGR2|p.S286Vfs*36|1|0.11|ENSG00000122877|chr10:62813783-62813783|G/-|frameshift_variant;ENSG00000122877|ENST00000242480|EGR2;nc|ENSG00000122877|P11161-2|EGR2	38.80614096846853	0.28164298475537564	6				NaN	NaN	0	NaN	7826	3325	11146
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11171	30.239	NaN	59986	30	0	9218.2	0.169			+	30108	PRKSHLMY	8	89	516.2779394396961	1030.541325946192	2	516.27978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PRKSHLMY_	REV__ENST00000483591.6_1_6:16432911-16433279:-|nuORF	47.91560031466742	0.6071945918984287	6				NaN	NaN	0	NaN	7841	3328	11170
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11172	30.242	NaN	16421	30	0	9224.2	0.106			+	49114	VVLKLELDI	9	52	347.8904405795517	NaN	0	347.8905029296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVLKLELDI_	REV__AFAP1L1|p.A692V|1|0.21|ENSG00000157510|chr5:149332794-149332794|C/T|missense_variant	47.657333605630114	0.2228375344433429	6				NaN	NaN	0	NaN	7842	3328	11170
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11173	30.244	NaN	17934	30	0	1880.5	0.106			+	37295	SLAVNLRM	8	88	452.25882206237173	902.5030911915435	2	452.2523193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLAVNLRM_	REV__ENST00000562413.2_1_6:147124063-147124576:-|nuORF	101.21157088398209	0.2500103534009131	6				NaN	NaN	0	NaN	7843	3328	11170
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11174	30.246	NaN	17963	30	0	2530.8	0.106			+	106	AAEGFLNMQ	9	78	490.7290856563488	979.4436183794976	2	490.73065185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AAEGFLNMQ_	REV__tr|U7SNP7|U7SNP7_FUSNUDNA-directedDNApolymeraseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01977PE=4SV=1	51.33545320467046	0.2872990594074956	6				NaN	NaN	0	NaN	7844	3328	11170
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11175	30.248	NaN	9016.4	30	0	1045.5	0.106				-1	 	0	80	523.2965258218397	1044.5784987104794	2	523.2984619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7845	3328	11170
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11176	30.249	NaN	22951	30	0	2628.2	0.106	+			23304	KYPNLLNQ	8	82	495.27421013393445	988.5338673346689	2	495.77691650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KYPNLLNQ_	ENSG00000168522|ENST00000302279|FNTA;ENST00000528400.1_1_8:42939784-42940422:+|nuORF;ENST00000530657.1_1_11:85906626-85907241:+|nuORF;nc|ENSG00000168522|P49354-2|FNTA	47.91560031466742	0.6071945918984287	6				NaN	NaN	0	NaN	7846	3328	11170
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11177	30.251	NaN	10231	30	0	1099.5	0.035	+			210	AALNQQILK	9	82	499.8035324450459	997.5925119568918	2	499.80340576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AALNQQILK_	ENSG00000131941|ENST00000254260|RHPN2;RHPN2|p.L194Pfs*53|1|0.13|ENSG00000131941|chr19:33011691-33011691|A/-|frameshift_variant	90.77665401227738	0.06267569666681755	6				NaN	NaN	0	NaN	7847	3328	11170
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11195	30.287	NaN	142010	30	0	27321	0.183				-1	 	0	121	447.24413858280735	892.4737242324147	2	447.245361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7862	3331	11194
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11196	30.29	NaN	108650	30	0	16685	0.106				-1	 	0	95	472.77269192865447	943.530830924109	2	472.77398681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7863	3331	11194
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11197	30.293	NaN	35553	30	0	4117.2	0.106	+			42813	TEARDGHLRA	10	96	563.2914042030533	1124.5682554729065	2	563.2933959960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TEARDGHLRA_	ENST00000560168.1_1_19:46269191-46269407:-|nuORF	79.48907831485694	0.19979514868675113	6				NaN	NaN	0	NaN	7864	3331	11194
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11198	30.294	NaN	33308	30	0	2776.8	0.106	+			2314	AMLAATDLGL	10	100	496.2593264037982	990.5040998743964	2	496.26361083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_AM(Oxidation (M))LAATDLGL_	ENSG00000167355|ENST00000300773|OR51B5	71.29570347882199	0.26673431503403816	6				NaN	NaN	0	NaN	7865	3331	11194
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11199	30.296	NaN	24045	30	0	2713.9	0.106			+	-1	TVLLWEML	8	95	510.77564949640464	1019.5367460596093	2	510.7771911621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_TVLLWEM(Oxidation (M))L_	REV__ENSG00000166343|ENST00000299432|MSS51	57.81127852772723	0.5234495074909924	6				NaN	NaN	0	NaN	7866	3331	11194
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11200	30.298	NaN	18119	30	0	2526.5	0.106			+	26922	LYFPTRVES	9	91	556.292743558033	1110.5709341828658	2	556.2947998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LYFPTRVES_	REV__ENST00000583978.5_1_17:80377675-80377780:+|nuORF	76.7741389293348	0.11149722112137898	6				NaN	NaN	0	NaN	7867	3331	11194
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11201	30.3	NaN	9766.8	30	0	782.31	0.035	+			32910	RDVGSGGDEI	10	76	502.73606122184805	1003.4575695104961	2	502.7377014160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RDVGSGGDEI_	ENST00000538886.5_1_17:73233291-73233537:-|nuORF	45.97224482568171	0.49411383603842696	6				NaN	NaN	0	NaN	7868	3331	11194
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11219	30.336	NaN	65960	30	0	9758.8	0.214			+	37883	SNWGLLATK	9	97	495.27421013393445	988.5338673346689	2	495.27581787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SNWGLLATK_	REV__WDR87|p.K2720Rfs*57|5|0.35|ENSG00000171804|chr19:37885395-37885395|T/-|frameshift_variant	66.96192283764107	0.15557981141143568	6				NaN	NaN	0	NaN	7883	3334	11218
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11220	30.339	NaN	25517	30	0	2651.2	0.106	+			7077	CVLARTQI	8	82	452.25882206237173	902.5030911915435	2	452.2602233886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_CVLARTQI_	ENSG00000173762|ENST00000312648|CD7	105.26878712358291	0.24777199087279123	6				NaN	NaN	0	NaN	7884	3334	11218
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11221	30.341	NaN	10506	30	0	4238.8	0.106				-1	 	0	73	480.2782781799936	958.5420034267872	2	480.279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7885	3334	11218
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11222	30.343	NaN	9836.3	30	0	1090.2	0.106	+			50593	YDIRTNAV	8	75	476.248273965403	NaN	0	476.24786376953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YDIRTNAV_	ENSG00000117472|ENST00000372003|TSPAN1;ENST00000470318.1_1_1:46650565-46651202:+|nuORF	40.05817265558897	1.7418937515398478	6				NaN	NaN	0	NaN	7886	3334	11218
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11223	30.345	NaN	6449.1	30	0	702.49	0.106				-1	VALSCQCAL	9	69	482.7316611322574	963.4487693313148	2	482.7311706542969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_VALSCQC(Carbamidomethyl (C))AL_	ENSG00000104818|ENST00000359342|CGB2;ENSG00000104827|ENST00000357383|CGB3;ENSG00000189052|ENST00000301408|CGB5;ENSG00000196337|ENST00000684222|CGB7;ENSG00000213030|ENST00000448456|CGB8;ENSG00000267631|ENST00000301407|CGB1;nc|ENSG00000213030|P0DN86-2|CGB3;nc|ENSG00000267631|A6NKQ9|CGB1	74.25504064058377	0.12238981753128622	6				NaN	NaN	0	NaN	7887	3334	11218
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11224	30.347	NaN	23181	30	0	2247.9	0.036	+			51113	YMDYLPSY	8	87	526.2260003406109	1050.4374477480217	2	526.2276000976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YMDYLPSY_	tr|U7T5V7|U7T5V7_FUSNUGlutaconyl-CoAdecarboxylasesubunitalphaOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00404PE=4SV=1	35.200714571348534	0.6875396545722289	6				NaN	NaN	0	NaN	7888	3334	11218
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11225	30.347	NaN	19788	30	0	6880.6	0.139				-1	 	0	77	430.26470980518786	858.5148666771757	2	430.2657775878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7889	3334	11218
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11243	30.387	NaN	193840	30	0	32672	0.156	+			39966	STMGYMMAK	9	96	510.2199391225373	1018.4253253118746	2	510.2218322753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STMGYMMAK_	ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;ENST00000518337.1_1_8:74128289-74128592:-|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P	180.92599232761785	0.0012030822705978085	6				NaN	NaN	0	NaN	7904	3337	11242
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11244	30.389	NaN	25445	30	0	3310.8	0.106	+			35128	SAHSHFISL	9	71	499.75509743964705	997.4956419460941	2	499.7561950683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAHSHFISL_	ARID2|p.L370Ffs*18|1|0.33|ENSG00000189079|chr12:45837401-45837402|-/T|frameshift_variant;ARID2|p.N1778Ifs*13|1|0.15|ENSG00000189079|chr12:45893686-45893686|A/-|frameshift_variant;ARID2|p.P851Hfs*4|1|0.36|ENSG00000189079|chr12:45850671-45850671|C/-|frameshift_variant;ARID2|p.Q686Hfs*19|1|0.04|ENSG00000189079|chr12:45850180-45850181|-/TGAAATGACTG|frameshift_variant;ENSG00000189079|ENST00000334344|ARID2;ENST00000479608.5_1_12:46230576-46239804:+|nuORF;nc|ENSG00000189079|Q68CP9-3|ARID2	111.64827973302667	0.027316110422332632	6				NaN	NaN	0	NaN	7905	3337	11242
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11245	30.391	NaN	91833	30	0	11855	0.106			+	32163	QSQLQLIEQ	9	96	543.7929940738599	1085.5714352145196	2	543.7954711914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QSQLQLIEQ_	REV__ENSG00000166578|ENST00000416617|IQCD	110.11987700582712	0.028875675806141952	6				NaN	NaN	0	NaN	7906	3337	11242
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11246	30.393	NaN	26224	30	0	2941.5	0.106	+			27453	MLLLDGLIY	9	87	525.7990136079178	1049.5834742826355	2	525.8007202148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MLLLDGLIY_	ABCA6|p.D1552Gfs*18|1|0.04|ENSG00000154262|chr17:69081107-69081108|-/C|frameshift_variant;ABCA6|p.I1144Mfs*6|1|0.11|ENSG00000154262|chr17:69091239-69091240|-/CTTTTCCC|frameshift_variant;ABCA6|p.N544Kfs*4|1|0.41|ENSG00000154262|chr17:69114912-69114913|-/T|frameshift_variant;ENSG00000154262|ENST00000284425|ABCA6;nc|ENSG00000154262|Q8N139-2|ABCA6	31.954861631926434	0.5046124803899898	6				NaN	NaN	0	NaN	7907	3337	11242
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11247	30.395	NaN	39320	30	0	4302.7	0.106	+			8583	EAYPDHTQF	9	88	554.2394155697664	1106.4642782063327	2	554.240966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EAYPDHTQF_	ENSG00000151500|ENST00000341541|THYN1;ENST00000533975.1_1_11:134119036-134122923:-|nuORF;nc|ENSG00000151500|Q9P016-2|THYN1;THYN1|p.N194Ifs*15|2|0.22|ENSG00000151500|chr11:134248859-134248859|T/-|frameshift_variant	79.71258880314673	0.09879134589249085	6				NaN	NaN	0	NaN	7908	3337	11242
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11248	30.397	NaN	17843	30	0	1792.9	0.106	+			28098	NAFKEITTM	9	80	535.761305715215	1069.50805849723	2	535.7632446289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_NAFKEITTM(Oxidation (M))_	ENSG00000137947|ENST00000370500|GTF2B;ENST00000486078.1_1_1:89325774-89329699:-|nuORF;ENST00000494819.5_1_1:89324456-89357188:-|nuORF	145.15565482312357	0.00806134135205793	6				NaN	NaN	0	NaN	7909	3337	11242
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11249	30.399	NaN	21857	30	0	11231	0.037	+			11357	FLGSFIPTQL	10	85	561.8146421582643	1121.6147313833285	2	561.8163452148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FLGSFIPTQL_	ENST00000418140.5_2_7:43686327-43686537:-|nuORF	45.97224482568171	0.49411383603842696	6				NaN	NaN	0	NaN	7910	3337	11242
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11267	30.435	NaN	268700	30	0	118220	0.191			+	9787	ENSVLHIEK	9	124	356.8611935961393	1067.561751388618	3	356.8623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ENSVLHIEK_	REV__ENSG00000138496|ENST00000682323|PARP9;REV__nc|ENSG00000138496|Q8IXQ6-3|PARP9;REV__nc|ENSG00000138496|Q8IXQ6|PARP9;REV__PARP9|p.T633Pfs*5|2|0.22|ENSG00000138496|chr3:122537047-122537047|T/-|frameshift_variant	47.95952297671804	0.32689736945648856	6				NaN	NaN	0	NaN	7925	3340	11266
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11268	30.438	NaN	105270	30	0	53506	0.106	+			30430	PYKAEVSRT	9	104	350.8576832231855	1049.5512202697566	3	350.8587646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PYKAEVSRT_	ENSG00000112144|ENST00000676107|CILK1;ICK|p.T348M|1|0.17|ENSG00000112144|chr6:53013771-53013771|G/A|missense_variant	87.75429964447693	0.0711966946989736	6				NaN	NaN	0	NaN	7926	3340	11266
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11269	30.44	NaN	52833	30	0	8934.7	0.106			+	9061	EGGHRARVI	9	79	497.7803177486181	993.5460825640362	2	497.78173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EGGHRARVI_	REV__CYC1|p.E254Rfs*3|1|0.5|ENSG00000179091|chr8:144096730-144096731|-/A|frameshift_variant;REV__ENSG00000179091|ENST00000318911|CYC1;REV__ENST00000533444.1_1_8:145150729-145152236:+|nuORF	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	7927	3340	11266
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11270	30.442	NaN	66531	30	0	12861	0.106				-1	 	0	93	527.7909014396516	1053.5672499461032	2	527.7928466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7928	3340	11266
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11271	30.444	NaN	25419	30	0	3000.3	0.106	+			12428	GEARRLRC	8	88	480.7610497366423	959.5075465400846	2	480.7624816894531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GEARRLRC_	ENSG00000187796|ENST00000371732|CARD9;nc|ENSG00000289701|Q9H257-2|CARD9;nc|ENSG00000289701|Q9H257-3|CARD9	68.484700416344	0.4195245774506064	6				NaN	NaN	0	NaN	7929	3340	11266
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11272	30.446	NaN	33355	30	0	3174.5	0.106			+	27413	MKWQEQPK	8	89	537.7732801974204	1073.5320074616407	2	537.7749633789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MKWQEQPK_	REV__ENST00000264709.7_2_2:25498379-25505441:-|nuORF	93.19546047674547	0.2677966331495483	6				NaN	NaN	0	NaN	7930	3340	11266
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11273	30.448	NaN	29621	30	0	10507	0.037			+	26781	LVRIPRRRA	9	86	379.5873811892369	1135.7403141679108	3	379.5887145996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LVRIPRRRA_	REV__ENSG00000088305|ENST00000328111|DNMT3B;REV__nc|ENSG00000088305|Q9UBC3-2|DNMT3B;REV__nc|ENSG00000088305|Q9UBC3-3|DNMT3B;REV__nc|ENSG00000088305|Q9UBC3-4|DNMT3B;REV__nc|ENSG00000088305|Q9UBC3-5|DNMT3B;REV__nc|ENSG00000088305|Q9UBC3-6|DNMT3B;REV__nc|ENSG00000088305|Q9UBC3-7|DNMT3B;REV__nc|ENSG00000088305|Q9UBC3-8|DNMT3B	19.996771675451527	0.6112419832031292	6				NaN	NaN	0	NaN	7931	3340	11266
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11291	30.483	NaN	36866	30	0	9523.9	0.214	+			10319	ETRQRGSR	8	83	495.26546266253587	988.5163723918718	2	495.2663879394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ETRQRGSR_	ENST00000528273.5_1_17:43509005-43510572:-|nuORF	60.97194046774394	0.49215940876911696	6				NaN	NaN	0	NaN	7946	3343	11290
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11292	30.487	NaN	16447	30	0	2333.1	0.106	+			30387	PVPTERLEQ	9	81	534.7882298975837	1067.5619068619674	2	534.7898559570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PVPTERLEQ_	ENSG00000255587|ENST00000612677|RAB44	104.74654710444128	0.034358562718640136	6				NaN	NaN	0	NaN	7947	3343	11290
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11293	30.489	NaN	15699	30	0	2201.2	0.106	+			22998	KVSDYILQH	9	79	551.798576333284	NaN	0	551.798583984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KVSDYILQH_	ENSG00000148219|ENST00000313400|ASTN2;nc|ENSG00000148219|O75129-2|ASTN2;nc|ENSG00000148219|O75129-3|ASTN2;nc|ENSG00000148219|O75129-4|ASTN2;nc|ENSG00000148219|O75129-6|ASTN2	109.43880257439609	0.010203938004363878	6				NaN	NaN	0	NaN	7948	3343	11290
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11294	30.49	NaN	33515	30	0	6118.1	0.106				-1	MMLGIFQFT	9	89	560.2667201288677	1118.5188873245354	2	560.26953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Oxidation (M)	_M(Oxidation (M))M(Oxidation (M))LGIFQFT_	ENSG00000198077|ENST00000301146|CYP2A7;ENSG00000255974|ENST00000301141|CYP2A6	63.30626980617807	0.18605348971131092	6				NaN	NaN	0	NaN	7949	3343	11290
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11295	30.492	NaN	11705	30	0	1531.6	0.106				-1	 	0	76	407.7358608268111	813.4571687204223	2	407.7369689941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7950	3343	11290
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11296	30.494	NaN	10748	30	0	1800.8	0.106	+			30939	QELQELNRV	9	80	564.8019991438331	1127.589445354466	2	564.8042602539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QELQELNRV_	ENST00000486498.1_1_2:171811278-171813015:+|nuORF	61.691277971877994	0.19951612995419254	6				NaN	NaN	0	NaN	7951	3343	11290
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11297	30.496	NaN	19861	30	0	8034.5	0.037	+			31285	QICHTLIMK	9	73	362.8646639743828	1085.5721625233484	3	362.8657531738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QICHTLIMK_	nc|ENSG00000216937|Q96M83-5|CCDC7	39.252832667884924	0.4290233611298554	6				NaN	NaN	0	NaN	7952	3343	11290
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11310	30.522	NaN	27768	30	0	8467.1	0.214				-1	 	0	90	546.7862549498658	1091.5579569665315	2	546.7884521484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7962	3346	11309
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11311	30.526	NaN	19134	30	0	6844	0.106			+	26619	LVAEKITK	8	68	451.2893652993866	NaN	0	451.2895812988281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LVAEKITK_	REV__ENST00000438116.2_1_22:40983448-40983622:-|nuORF	69.6276240434122	1.7418937515398478	6				NaN	NaN	0	NaN	7963	3346	11309
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11312	30.528	NaN	27486	30	0	4216.4	0.106				-1	VCVRCPGY	8	87	505.73089647408574	1009.4472400149715	2	505.7328186035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_VC(Carbamidomethyl (C))VRC(Carbamidomethyl (C))PGY_	ENSG00000183597|ENST00000327374|TANGO2;ENST00000490583.5_1_22:20049206-20052182:+|nuORF;nc|ENSG00000183597|Q6ICL3-2|TANGO2;nc|ENSG00000183597|Q6ICL3-3|TANGO2;nc|ENSG00000183597|Q6ICL3-4|TANGO2;nc|ENSG00000183597|Q6ICL3-5|TANGO2	37.028477286268924	0.6747514403204248	6				NaN	NaN	0	NaN	7964	3346	11309
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11313	30.53	NaN	17233	30	0	2089.6	0.106			+	-1	AIASLCPLAM	10	88	531.7686011447425	1061.522649356285	2	531.7705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_AIASLC(Carbamidomethyl (C))PLAM(Oxidation (M))_	REV__ENSG00000198838|ENST00000634891|RYR3;REV__nc|ENSG00000198838|Q15413-2|RYR3;REV__nc|ENSG00000198838|Q15413-3|RYR3;REV__RYR3|p.E3943Rfs*18|1|0.12|ENSG00000198838|chr15:33837800-33837801|-/A|frameshift_variant;REV__RYR3|p.N4580Mfs*8|1|0.37|ENSG00000198838|chr15:33853618-33853618|A/-|frameshift_variant	53.351449002276354	0.42630798468005626	6				NaN	NaN	0	NaN	7965	3346	11309
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11314	30.532	NaN	16172	30	0	2203.4	0.106	+			43206	TEVIHTGTL	9	80	485.7624332399915	969.510313546783	2	485.7640075683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TEVIHTGTL_	ENSG00000182986|ENST00000682928|ZNF320;ENSG00000189190|ENST00000692063|ZNF600;ENSG00000203326|ENST00000474037|ZNF525;ENSG00000204604|ENST00000595646|ZNF468;ENSG00000213020|ENST00000652185|ZNF611;ENSG00000213793|ENST00000638862|ZNF888;ENSG00000213799|ENST00000458035|ZNF845;nc|ENSG00000189190|Q6ZNG1|ZNF600;nc|ENSG00000204604|Q5VIY5-2|ZNF468;nc|ENSG00000213020|Q8N823-2|ZNF611;nc|ENSG00000293246|Q8N8H1|ZNF321P;ZNF468|p.K232Nfs*4|1|0.3|ENSG00000204604|chr19:52841598-52841598|T/-|frameshift_variant;ZNF525|p.S149Yfs*51|1|0.05|ENSG00000203326|chr19:53381024-53381025|-/ATTGC|frameshift_variant;ZNF611|p.F463Lfs*36|1|0.09|ENSG00000213020|chr19:52705666-52705666|A/-|frameshift_variant;ZNF611|p.K221Nfs*6|1|0.35|ENSG00000213020|chr19:52706392-52706392|T/-|frameshift_variant	134.81075121484326	0.012914550297035062	6				NaN	NaN	0	NaN	7966	3346	11309
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11315	30.533	NaN	14405	30	0	1225.2	0.106	+			12496	GEEGDLKTSL	10	90	524.7599094127208	1047.5052658922416	2	524.7619018554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GEEGDLKTSL_	ENSG00000066135|ENST00000372396|KDM4A;KDM4A|p.K699Sfs*7|1|0.06|ENSG00000066135|chr1:43690902-43690902|A/-|frameshift_variant	77.53327743719008	0.21577387331637743	6				NaN	NaN	0	NaN	7967	3346	11309
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11316	30.535	NaN	14525	30	0	4638.7	0.034	+			19079	IYIGAGICAG	10	72	469.2425538453495	936.470554757499	2	469.2434387207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IYIGAGICAG_	ENSG00000135077|ENST00000307851|HAVCR2	77.94384346573518	0.21241958424364343	6				NaN	NaN	0	NaN	7968	3346	11309
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11334	30.571	NaN	30813	30	0	4713.5	0.214	+			5668	AVDQIAFQK	9	95	510.278332523096	1018.5421121129921	2	510.27960205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVDQIAFQK_	ENSG00000144554|ENST00000675286|FANCD2;FANCD2|p.I1249Nfs*2|1|0.48|ENSG00000144554|chr3:10090346-10090347|-/A|frameshift_variant;FANCD2|p.N890Ifs*14|1|0.36|ENSG00000144554|chr3:10073312-10073312|A/-|frameshift_variant;nc|ENSG00000144554|Q9BXW9-1|FANCD2;nc|ENSG00000144554|Q9BXW9-3|FANCD2;nc|ENSG00000144554|Q9BXW9-4|FANCD2	112.2953585152457	0.026655838328212944	6				NaN	NaN	0	NaN	7983	3349	11333
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11335	30.575	NaN	42663	30	0	6581.9	0.106			+	18638	ISTLWRCP	8	101	488.25752863598075	974.5005043387615	2	488.25872802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ISTLWRCP_	REV__ANKRD40|p.A157Cfs*33|1|0.33|ENSG00000154945|chr17:50699709-50699710|-/G|frameshift_variant	82.30502934623384	0.30436709589983096	6				NaN	NaN	0	NaN	7984	3349	11333
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11336	30.577	NaN	18593	30	0	3007.6	0.106	+			36223	SELTQPKL	8	78	458.259252248902	914.503951564604	2	458.2607727050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SELTQPKL_	ENSG00000197601|ENST00000354817|FAR1;ENST00000524933.1_1_11:13716477-13732426:+|nuORF	161.89823264540465	0.07234804555662853	6				NaN	NaN	0	NaN	7985	3349	11333
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11337	30.579	NaN	13210	30	0	723.79	0.106	+			10258	ETLIPQIML	9	84	529.3019869785303	1056.5894210238605	2	529.3037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ETLIPQIML_	tr|U7SRG5|U7SRG5_FUSNUHigh-affinityirontransporterOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01654PE=3SV=1	60.97194046774394	0.20551255781574032	6				NaN	NaN	0	NaN	7986	3349	11333
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11338	30.58	NaN	13850	30	0	3992.6	0.106				-1	 	0	62	421.24688886120555	840.4792247892111	2	421.24798583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	7987	3349	11333
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11339	30.582	NaN	10396	30	0	1212.5	0.034	+			13961	GSALTTLWA	9	74	460.24819649251015	918.4818400518203	2	461.2567443847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GSALTTLWA_	ENST00000409379.7_1_8:145668168-145669565:-|nuORF	37.15910966729921	0.4535818937225704	6				NaN	NaN	0	NaN	7988	3349	11333
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11340	30.583	NaN	11971	30	0	1599	0.138				-1	GDCGGRAAL	9	66	438.70384657769984	875.3931402221997	2	438.7052001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_GDC(Carbamidomethyl (C))GGRAAL_	ENST00000481714.1_1_2:68546389-68546934:-|nuORF	55.50420428727701	0.2510918378945873	6				NaN	NaN	0	NaN	7989	3349	11333
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11358	30.622	NaN	306330	30	0	143870	0.115	+			9109	EGKSIPNIIK	10	96	366.8889099298693	1097.644900389808	3	366.8901062011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EGKSIPNIIK_	COL24A1|p.P563Lfs*42|1|0.04|ENSG00000171502|chr1:86089193-86089193|G/-|frameshift_variant;ENSG00000171502|ENST00000370571|COL24A1;nc|ENSG00000171502|Q17RW2-2|COL24A1	71.87747018426188	0.26198133118427214	6				NaN	NaN	0	NaN	8004	3352	11357
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11359	30.624	NaN	151640	30	0	43828	0.098	+			9110	EGKSIPNIIK	10	96	549.8297738783184	1097.6449948234367	2	549.8316040039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EGKSIPNIIK_	COL24A1|p.P563Lfs*42|1|0.04|ENSG00000171502|chr1:86089193-86089193|G/-|frameshift_variant;ENSG00000171502|ENST00000370571|COL24A1;nc|ENSG00000171502|Q17RW2-2|COL24A1	72.87924865735499	0.25379688738724415	6				NaN	NaN	0	NaN	8005	3352	11357
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11360	30.626	NaN	82751	30	0	6463.3	0.106	+			49504	VWDQVFFW	8	94	563.7709078870847	1125.5272628409693	2	563.7728881835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VWDQVFFW_	ENSG00000127831|ENST00000248444|VIL1	88.64286706044652	0.2815785716369046	6				NaN	NaN	0	NaN	8006	3352	11357
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11361	30.628	NaN	40582	30	0	12900	0.106	+			1058	AEKRSLMLQ	9	117	364.5337590473297	1090.5794477421891	3	364.535400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_AEKRSLM(Oxidation (M))LQ_	GLI3|p.V1045M|1|0.35|ENSG00000106571|chr7:41965940-41965940|C/T|missense_variant	93.1432384553994	0.056003526918089595	6				NaN	NaN	0	NaN	8007	3352	11357
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11362	30.63	NaN	42380	30	0	7031.6	0.106				-1	 	0	89	483.2673271171361	964.5201013010723	2	483.2684326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8008	3352	11357
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11363	30.631	NaN	28001	30	0	5003.9	0.106				-1	 	0	81	477.2913224916524	952.5680920501048	2	477.29241943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8009	3352	11357
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11364	30.633	NaN	10522	30	0	1156.8	0.032				-1	 	0	73	405.2099533494152	808.4053537656304	2	405.21112060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8010	3352	11357
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11365	30.634	NaN	11434	30	0	1775.4	0.14	+			2521	APVKENIPY	9	73	515.7820632268392	NaN	0	515.7822265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_APVKENIPY_	ENSG00000131941|ENST00000254260|RHPN2;nc|ENSG00000131941|Q8IUC4-2|RHPN2	49.44154591367651	0.21054156626303966	6				NaN	NaN	0	NaN	8011	3352	11357
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11383	30.673	NaN	78381	30	0	55591	0.214				-1	 	0	94	521.2806857310987	1040.5468185289974	2	521.2825927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8026	3355	11382
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11384	30.677	NaN	71267	30	0	6047.9	0.106			+	14651	GTHTRRHVV	9	105	531.7994303299129	1061.5843077266256	2	531.801025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTHTRRHVV_	REV__ENSG00000198131|ENST00000687789|ZNF544	58.78195531508484	0.22376836668196862	6				NaN	NaN	0	NaN	8027	3355	11382
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11385	30.679	NaN	36575	30	0	5308.4	0.106	+			18759	ITMLGLGCTV	10	87	540.773364105861	1079.532175278522	2	540.7756958007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_ITM(Oxidation (M))LGLGC(Carbamidomethyl (C))TV_	ENSG00000145248|ENST00000273861|SLC10A4	96.19043198914106	0.09563241103653833	6				NaN	NaN	0	NaN	8028	3355	11382
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11386	30.681	NaN	22674	30	0	1983.6	0.106	+			2084	ALDVVLKGE	9	83	472.27646564521405	NaN	0	472.27642822265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ALDVVLKGE_	ENST00000572684.1_1_17:1944307-1944574:+|nuORF	74.25504064058377	0.09106938647426577	6				NaN	NaN	0	NaN	8029	3355	11382
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11387	30.682	NaN	17058	30	0	3516.5	0.106				-1	MEDRVGTGC	9	84	512.7129622635634	1023.4113715939269	2	512.715087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_MEDRVGTGC(Carbamidomethyl (C))_	ENST00000307662.4_1_5:150038319-150038361:+|nuORF	42.396135135203025	0.392153681582562	6				NaN	NaN	0	NaN	8030	3355	11382
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11388	30.684	NaN	14177	30	0	1254.5	0.038	+			7076	CVKLAGATHYP	11	93	608.8103943774211	1215.606235821642	2	608.8121337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_C(Carbamidomethyl (C))VKLAGATHYP_	ENSG00000235863|ENST00000451237|B3GALT4	93.1432384553994	0.08590712355761482	6				NaN	NaN	0	NaN	8031	3355	11382
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11389	30.685	NaN	9096.3	30	0	879.34	0.141				-1	EAERMKLKA	9	79	546.2976570713059	1090.5807612094118	2	546.2999877929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_EAERM(Oxidation (M))KLKA_	ENSG00000132589|ENST00000394908|FLOT2;ENST00000577789.5_1_17:27207581-27224656:-|nuORF	58.78195531508484	0.22376836668196862	6				NaN	NaN	0	NaN	8032	3355	11382
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11407	30.724	NaN	98583	30	0	12834	0.202			+	18562	ISNPGWLCL	9	119	501.75703209307875	1001.4995112529575	2	501.7586975097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ISNPGWLCL_	REV__ENST00000494873.1_1_1:51702296-51736909:+|nuORF	66.42927471994793	0.16001998865088202	6				NaN	NaN	0	NaN	8047	3358	11406
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11408	30.728	NaN	30474	30	0	7047.7	0.106	+			18933	IVNDFAYMK	9	86	558.7737733250077	NaN	0	558.7738037109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_IVNDFAYM(Oxidation (M))K_	ENSG00000170348|ENST00000303575|TMED10;ENST00000534816.1_1_8:146220430-146220868:+|nuORF;ENST00000555036.1_1_14:75602424-75614456:-|nuORF;ENST00000555873.1_1_14:75601590-75605782:-|nuORF;ENST00000556969.5_1_14:75601590-75614465:-|nuORF	134.7655990226056	0.00014292611696254572	6				NaN	NaN	0	NaN	8048	3358	11406
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11409	30.73	NaN	56707	30	0	10080	0.106				-1	 	0	103	458.2777905824364	914.5410282316728	2	458.27899169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8049	3358	11406
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11410	30.732	NaN	19809	30	0	1918.9	0.106	+			32653	RAAGLGRGTR	10	92	507.7991844698984	1013.5838160065969	2	507.80078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RAAGLGRGTR_	ENST00000589085.5_1_19:5785216-5787684:-|nuORF	67.49366992349736	0.29779660154124327	6				NaN	NaN	0	NaN	8050	3358	11406
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11411	30.733	NaN	37458	30	0	4440.8	0.106	+			34850	RYQTQPVTL	9	97	553.3034601264567	1104.5923673197133	2	553.3042602539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RYQTQPVTL_	ENSG00000197321|ENST00000355867|SVIL;nc|ENSG00000197321|O95425-2|SVIL;nc|ENSG00000197321|O95425-3|SVIL;nc|ENSG00000197321|O95425-4|SVIL;SVIL|p.M1863Dfs*18|1|0.28|ENSG00000197321|chr10:29471186-29471187|-/C|frameshift_variant;SVIL|p.M1863Wfs*44|8|0.39|ENSG00000197321|chr10:29471187-29471187|C/-|frameshift_variant;SVIL|p.N2095Kfs*36|1|0.25|ENSG00000197321|chr10:29462394-29462395|-/T|frameshift_variant	53.08895987439943	0.27122541748218487	6				NaN	NaN	0	NaN	8051	3358	11406
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11412	30.735	NaN	13900	30	0	1111.4	0.106	+			40	AAALFTIHK	9	83	486.2853429828425	970.556133032485	2	486.2870178222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AAALFTIHK_	ENSG00000061676|ENST00000361354|NCKAP1;nc|ENSG00000061676|Q9Y2A7-2|NCKAP1	74.25504064058377	0.12238981753128622	6				NaN	NaN	0	NaN	8052	3358	11406
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11413	30.737	NaN	20738	30	0	2920	0.035				-1	 	0	83	491.8224189374356	981.6302849416712	2	491.82391357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8053	3358	11406
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11431	30.774	NaN	67993	30	0	16068	0.214				-1	APARAGCCPL	10	109	500.7387424727947	999.4629320123894	2	500.7400817871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))APARAGCCPL_	ENSG00000173431|ENST00000308227|RNASE8	45.9519527083369	0.4943008177357963	6				NaN	NaN	0	NaN	8068	3361	11430
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11432	30.777	NaN	25354	30	0	2703.8	0.106				-1	QFLRTKFM	8	96	543.7929940738599	1085.5714352145196	2	543.7953491210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_QFLRTKFM(Oxidation (M))_	tr|U7T4Z4|U7T4Z4_FUSNURiboflavinbiosynthesisproteinRibDOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00613PE=3SV=1	87.75429964447693	0.2842685068779738	6				NaN	NaN	0	NaN	8069	3361	11430
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11433	30.779	NaN	26521	30	0	5666.1	0.106	+			38629	SSHCDQLTGQ	10	85	538.2274994760602	1074.4404460189203	2	538.2294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSHCDQLTGQ_	ENSG00000091128|ENST00000388781|LAMB4;nc|ENSG00000091128|A4D0S4-3|LAMB4	51.19269402634007	0.44601001148513897	6				NaN	NaN	0	NaN	8070	3361	11430
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11434	30.781	NaN	34772	30	0	5217.7	0.106				-1	 	0	79	471.2729554085873	940.5313578839746	2	471.27398681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8071	3361	11430
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11435	30.783	NaN	45113	30	0	7815	0.106	+			23888	LDIMPLTL	8	95	466.26246574671404	930.5103785602281	2	466.2632751464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_LDIM(Oxidation (M))PLTL_	ENSG00000089737|ENST00000621632|DDX24;ENST00000555762.1_1_14:94524146-94547480:-|nuORF;nc|ENSG00000089737|Q9GZR7-2|DDX24	68.484700416344	0.4195245774506064	6				NaN	NaN	0	NaN	8072	3361	11430
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11436	30.785	NaN	16204	30	0	8406.9	0.036			+	21244	KLKFIPLNT	9	83	358.5619487602769	NaN	0	358.5620422363281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KLKFIPLNT_	REV__ENSG00000112335|ENST00000230085|SNX3;REV__ENSG00000147164|ENST00000374274|SNX12;REV__ENST00000465030.1_1_X:70280941-70288225:-|nuORF;REV__ENST00000490561.6_1_X:70280209-70288156:-|nuORF;REV__nc|ENSG00000112335|O60493-3|SNX3;REV__nc|ENSG00000112335|O60493-4|SNX3;REV__nc|ENSG00000147164|Q9UMY4-1|SNX12;REV__nc|ENSG00000147164|Q9UMY4-3|SNX12	33.921630207806714	0.3063038642147651	6				NaN	NaN	0	NaN	8073	3361	11430
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11437	30.785	NaN	44302	30	0	4548.9	0.141	+			24669	LGVRARGAAPG	11	104	533.8102245375177	1065.6058961418353	2	533.8123168945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LGVRARGAAPG_	ENST00000527406.1_1_11:9779925-9802076:+|nuORF	56.72105179125745	0.35272424613657194	6				NaN	NaN	0	NaN	8074	3361	11430
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11455	30.825	NaN	28209	30	0	8908.4	0.214			+	27019	LYSFMFVIL	9	70	383.54031833583736	1147.599125607712	3	383.54144287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LYSFM(Oxidation (M))FVIL_	REV__ENSG00000180251|ENST00000295269|SLC9A4;REV__SLC9A4|p.F354Sfs*2|1|0.05|ENSG00000180251|chr2:102505332-102505332|C/-|frameshift_variant;REV__SLC9A4|p.T483Pfs*15|1|0.33|ENSG00000180251|chr2:102508886-102508886|A/-|frameshift_variant	44.116797842482775	0.37197099687881774	6				NaN	NaN	0	NaN	8089	3364	11454
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11456	30.828	NaN	67751	30	0	30561	0.106			+	20640	KGHENIVCIH	10	80	575.296279563253	1148.578006193306	2	575.2981567382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KGHENIVCIH_	REV__ENSG00000099256|ENST00000320152|PRTFDC1	24.519189625965996	0.6795976720565101	6				NaN	NaN	0	NaN	8090	3364	11454
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11457	30.83	NaN	21384	30	0	3534.9	0.106				-1	 	0	81	471.7362651064242	941.4579772796484	2	471.7373352050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8091	3364	11454
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11458	30.832	NaN	11344	30	0	1693.5	0.106	+			39919	STMAIIVNK	9	85	488.7779110345187	NaN	0	488.7781982421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STMAIIVNK_	ENSG00000082898|ENST00000401558|XPO1;ENST00000428210.5_1_2:61705957-61719950:-|nuORF;ENST00000461407.5_1_2:61712881-61715780:-|nuORF;ENST00000492182.5_1_2:61710065-61713073:-|nuORF	131.03138772384656	0.00042866051192282686	6				NaN	NaN	0	NaN	8092	3364	11454
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11459	30.834	NaN	10727	30	0	1474.2	0.106			+	-1	IFSLNYCGVL	10	90	593.3021573369666	1184.5897617407331	2	593.30419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_IFSLNYC(Carbamidomethyl (C))GVL_	REV__ENSG00000136720|ENST00000259241|HS6ST1;REV__nc|ENSG00000136720|O60243-2|HS6ST1	42.86426827375447	0.522752283233888	6				NaN	NaN	0	NaN	8093	3364	11454
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11460	30.836	NaN	12004	30	0	1051.3	0.037	+			12361	GDQDLVGQRW	10	84	587.2860872192792	1172.5576215053584	2	587.2880249023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GDQDLVGQRW_	ENSG00000154493|ENST00000488181|C10orf90;ENST00000368674.5_1_10:128191356-128211334:-|nuORF;nc|nan|Q96M02-2|C10orf90;nc|nan|Q96M02|C10orf90	54.776311868738084	0.41334902933431344	6				NaN	NaN	0	NaN	8094	3364	11454
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11461	30.836	NaN	18918	30	0	4869.8	0.141				-1	 	0	90	559.2887858562864	1116.5630187793727	2	559.2908325195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8095	3364	11454
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11479	30.875	NaN	39468	30	0	3593.6	0.214	+			27361	MITLLNAPF	9	98	510.28349259142016	1018.5524322496403	2	510.2851257324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MITLLNAPF_	GPR83|p.T125A|1|0.15|ENSG00000123901|chr11:94400875-94400875|T/C|missense_variant	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	8110	3367	11478
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11480	30.878	NaN	28843	30	0	13309	0.106	+			9196	EGRAASARGL	10	88	494.27017658578524	986.5258002383705	2	494.27142333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EGRAASARGL_	ENST00000421085.6_1_X:10163107-10174585:+|nuORF	41.42661286455405	0.5359995577334734	6				NaN	NaN	0	NaN	8111	3367	11478
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11481	30.881	NaN	53440	30	0	15875	0.106				-1	 	0	84	413.2620209521456	824.5094889710912	2	413.2630310058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8112	3367	11478
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11482	30.882	NaN	19895	30	0	2109.8	0.106	+			8221	EAEKSQLIM	9	88	524.7685952789333	1047.5226376246665	2	524.7695922851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EAEKSQLIM_	ENSG00000137312|ENST00000376389|FLOT1;nc|ENSG00000137312|O75955-2|FLOT1	125.81401957644128	0.01768009863045738	6				NaN	NaN	0	NaN	8113	3367	11478
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11483	30.884	NaN	11870	30	0	1730.5	0.106				-1	 	0	79	509.2624124005481	1016.5102718678962	2	509.26416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8114	3367	11478
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11484	30.886	NaN	12130	30	0	2328.5	0.034	+			42132	SYMDLVGF	8	74	466.21567498132885	930.4167970294577	2	466.21661376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SYMDLVGF_	ENSG00000113721|ENST00000261799|PDGFRB;ENST00000520579.5_1_5:149495328-149514444:-|nuORF;PDGFRB|p.S1043Afs*2|1|0.11|ENSG00000113721|chr5:150117629-150117629|G/-|frameshift_variant	54.76467175910256	0.5536104764165384	6				NaN	NaN	0	NaN	8115	3367	11478
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11485	30.886	NaN	16245	30	0	1355.8	0.141	+			18310	IPSTRAAPHGP	11	93	552.3056065563885	NaN	0	552.3076171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IPSTRAAPHGP_	nc|ENSG00000276070|Q8NHW4-10|CCL4L1;nc|ENSG00000276070|Q8NHW4-3|CCL4L1	69.6276240434122	0.14037591385971868	6				NaN	NaN	0	NaN	8116	3367	11478
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11503	30.923	NaN	164380	30	0	44801	0.177				-1	 	0	91	475.269981907488	948.525410881776	2	475.271240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8131	3370	11502
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11504	30.926	NaN	81684	30	0	19093	0.106	+			19397	KANLTKSQN	9	98	502.280408719575	1002.54626450595	2	502.2822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KANLTKSQN_	DNAH17|p.K3895Nfs*2|1|0.24|ENSG00000187775|chr17:78439210-78439210|T/-|frameshift_variant;DNAH17|p.N4131Tfs*34|2|0.38|ENSG00000187775|chr17:78429136-78429136|G/-|frameshift_variant;ENSG00000187775|ENST00000389840|DNAH17;ENST00000586052.5_1_17:76435259-76454697:-|nuORF	58.22992032128504	0.22837015374068087	6				NaN	NaN	0	NaN	8132	3370	11502
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11505	30.928	NaN	30816	30	0	17149	0.106			+	45446	TWARVLGKL	9	80	348.55023970583943	1042.6288897177183	3	348.5513000488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TWARVLGKL_	REV__ENSG00000145495|ENST00000274140|MARCHF6;REV__nc|ENSG00000145495|O60337-5|MARCHF6;REV__nc|ENSG00000145495|O60337-6|MARCHF6	40.05817265558897	0.419577045485086	6				NaN	NaN	0	NaN	8133	3370	11502
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11506	30.93	NaN	110810	30	0	15476	0.106				-1	 	0	109	546.3118161644978	1090.6090793957956	2	546.3142700195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8134	3370	11502
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11507	30.932	NaN	20463	30	0	2844.3	0.106			+	3996	ATAWRPCL	8	77	459.2366276624369	916.4587023916738	2	459.2378234863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATAWRPCL_	REV__ENST00000361740.8_1_22:43015298-43015643:-|nuORF	60.29395666154354	0.49887135096048313	6				NaN	NaN	0	NaN	8135	3370	11502
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11508	30.934	NaN	14813	30	0	8584.3	0.106	+			41202	SVLDLSVHK	9	60	333.19373210012895	NaN	0	333.19390869140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVLDLSVHK_	ENSG00000116731|ENST00000311066|PRDM2;nc|ENSG00000116731|Q13029-2|PRDM2;nc|ENSG00000116731|Q13029-3|PRDM2;nc|ENSG00000116731|Q13029-5|PRDM2;PRDM2|p.G1390Efs*14|1|0.21|ENSG00000116731|chr1:13781963-13781964|GG/-|frameshift_variant;PRDM2|p.N1426Ifs*3|1|0.17|ENSG00000116731|chr1:13782065-13782065|A/-|frameshift_variant;PRDM2|p.P1648Qfs*14|1|0.24|ENSG00000116731|chr1:13782731-13782731|G/-|frameshift_variant	49.536043120802724	0.20989033510253738	6				NaN	NaN	0	NaN	8136	3370	11502
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11509	30.935	NaN	40823	30	0	5375.2	0.036	+			15197	GTSQLYVYR	9	94	543.7818691590971	1085.5491853849942	2	543.7828979492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GTSQLYVYR_	CPSF1|p.A1319Pfs*42|2|0.23|ENSG00000071894|chr8:144393943-144393943|C/-|frameshift_variant;CPSF1|p.P950Lfs*6|1|0.13|ENSG00000071894|chr8:144396478-144396478|G/-|frameshift_variant;CPSF1|p.V640Wfs*20|1|0.36|ENSG00000071894|chr8:144398110-144398110|G/-|frameshift_variant;ENSG00000071894|ENST00000616140|CPSF1	114.8945686534367	0.024290463251177924	6				NaN	NaN	0	NaN	8137	3370	11502
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11528	30.972	NaN	19805	30	0	2904.8	0.214			+	492	AAYTLWLGS	9	88	491.253851038328	980.493149143456	2	491.2571716308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAYTLWLGS_	REV__ENSG00000196218|ENST00000359596|RYR1;REV__nc|ENSG00000196218|P21817-2|RYR1;REV__nc|ENSG00000196218|P21817-3|RYR1;REV__RYR1|p.C1268Afs*4|1|0.14|ENSG00000196218|chr19:38473407-38473407|C/-|frameshift_variant;REV__RYR1|p.D2713Tfs*33|1|0.11|ENSG00000196218|chr19:38504811-38504811|C/-|frameshift_variant;REV__RYR1|p.P3303Tfs*8|1|0.36|ENSG00000196218|chr19:38517571-38517572|-/C|frameshift_variant	51.33545320467046	0.2872990594074956	6				NaN	NaN	0	NaN	8153	3373	11527
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11529	30.975	NaN	16004	30	0	3105.7	0.106	+			2344	AMTEFLEVS	9	80	513.7446495524584	1025.4747461717168	2	513.7462768554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AMTEFLEVS_	ENSG00000129219|ENST00000263088|PLD2;ENST00000575246.6_1_17:4711576-4721404:+|nuORF;nc|ENSG00000129219|O14939-3|PLD2;nc|ENSG00000129219|O14939-4|PLD2;PLD2|p.R330Gfs*10|1|0.33|ENSG00000129219|chr17:4810926-4810926|C/-|frameshift_variant	53.351449002276354	0.2690372970092375	6				NaN	NaN	0	NaN	8154	3373	11527
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11530	30.977	NaN	14092	30	0	1864.5	0.106	+			48322	VTFNSALAQK	10	87	539.796840370917	1077.579127808634	2	539.7984619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTFNSALAQK_	ENSG00000136156|ENST00000647800|ITM2B;nc|ENSG00000136156|Q9Y287-2|ITM2B	96.0336014099291	0.09653029772959643	6				NaN	NaN	0	NaN	8155	3373	11527
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11531	30.979	NaN	9556.3	30	0	1480.9	0.106	+			24493	LGHLGLVTPT	10	72	336.5344378546052	NaN	0	336.53424072265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LGHLGLVTPT_	CYP4F8|p.Y242Ffs*8|1|0.01|ENSG00000186526|chr19:15623153-15623154|-/GTGAAACGGAATAACCAGTTCTTCCGTTTCCCTTGTT|frameshift_variant;ENSG00000186526|ENST00000612078|CYP4F8;ENST00000592279.6_1_19:15751729-15757926:+|nuORF;nc|ENSG00000186529|Q08477-2|CYP4F3	27.882242232435846	0.4086243523356342	6				NaN	NaN	0	NaN	8156	3373	11527
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11532	30.981	NaN	16016	30	0	2689.7	0.106	+			30830	QEENITRAL	9	89	537.2839903905929	NaN	0	537.283447265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QEENITRAL_	ENSG00000099817|ENST00000615234|POLR2E;ENST00000586817.5_1_19:1089487-1094188:-|nuORF	54.776311868738084	0.17377682019723872	6				NaN	NaN	0	NaN	8157	3373	11527
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11533	30.983	NaN	16668	30	0	2458.1	0.106	+			6993	CRCSLAGHF	9	83	554.2447867924917	1106.4750206517833	2	554.2465209960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))RC(Carbamidomethyl (C))SLAGHF_	ENSG00000164823|ENST00000451899|OSGIN2	73.97473282117947	0.12360187025703594	6				NaN	NaN	0	NaN	8158	3373	11527
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11534	30.985	NaN	17043	30	0	1411.5	0.035			+	25376	LPHIITMY	8	93	494.27017658578524	986.5258002383705	2	494.7584533691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LPHIITMY_	REV__TACR1|p.A133T|1|0.09|ENSG00000115353|chr2:75120761-75120761|C/T|missense_variant	35.200714571348534	0.6875396545722289	6				NaN	NaN	0	NaN	8159	3373	11527
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11552	31.021	NaN	123030	30	0	19210	0.157				-1	 	0	85	509.25204012431436	1016.4895273154287	2	509.2536315917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8174	3376	11551
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11553	31.023	NaN	15485	30	0	9560.5	0.106	+			9207	EGRSRRPSP	9	69	521.2806857310987	1040.5468185289974	2	521.2825317382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EGRSRRPSP_	ENST00000602529.1_1_1:228463365-228463719:-|nuORF	51.19269402634007	0.2889735674168909	6				NaN	NaN	0	NaN	8175	3376	11551
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11554	31.025	NaN	17884	30	0	1539	0.106	+			7112	DAAAEERPPD	10	74	535.7403162045197	1069.4660794758393	2	535.7423706054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DAAAEERPPD_	ENST00000555759.1_1_14:95912279-95916550:-|nuORF	58.22992032128504	0.38193887838457763	6				NaN	NaN	0	NaN	8176	3376	11551
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11555	31.027	NaN	10056	30	0	1031.3	0.106	+			28021	MYLIAPNY	8	77	492.74740101721676	NaN	0	492.7482604980469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MYLIAPNY_	ENST00000430710.7_1_14:21853573-21853762:-|nuORF	62.97842346883844	1.7418937515398478	6				NaN	NaN	0	NaN	8177	3376	11551
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11556	31.029	NaN	10820	30	0	3864	0.106	+			32351	QTYEEALYK	9	74	572.7775679684805	1143.540583003761	2	573.281005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QTYEEALYK_	ENSG00000106541|ENST00000419304|AGR2	96.0336014099291	0.047854655524928534	6				NaN	NaN	0	NaN	8178	3376	11551
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11557	31.031	NaN	12768	30	0	4284.4	0.106	+			49710	VYLRRKSR	8	81	359.89254395146406	1076.6558024545923	3	359.8936767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VYLRRKSR_	ENSG00000071242|ENST00000265678|RPS6KA2;RPS6KA2|p.H197Afs*3|1|0.32|ENSG00000071242|chr6:166500902-166500903|-/C|frameshift_variant	37.15910966729921	0.6739408393984688	6				NaN	NaN	0	NaN	8179	3376	11551
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11558	31.033	NaN	18460	30	0	1639.2	0.035	+			11087	FEVSVDKAQ	9	96	511.761415607468	1021.508278281736	2	511.765380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FEVSVDKAQ_	ENSG00000136068|ENST00000295956|FLNB;FLNB|p.A832Rfs*9|1|0.26|ENSG00000136068|chr3:58111795-58111796|-/C|frameshift_variant;FLNB|p.G1596Vfs*33|1|0.36|ENSG00000136068|chr3:58136090-58136090|G/-|frameshift_variant;FLNB|p.G531Dfs*42|3|0.4|ENSG00000136068|chr3:58104061-58104061|G/-|frameshift_variant;FLNB|p.H532Tfs*9|1|0.31|ENSG00000136068|chr3:58104060-58104061|-/G|frameshift_variant;FLNB|p.N453Kfs*26|1|0.31|ENSG00000136068|chr3:58102212-58102213|-/A|frameshift_variant;nc|ENSG00000136068|O75369-2|FLNB;nc|ENSG00000136068|O75369-3|FLNB;nc|ENSG00000136068|O75369-4|FLNB;nc|ENSG00000136068|O75369-5|FLNB;nc|ENSG00000136068|O75369-6|FLNB;nc|ENSG00000136068|O75369-7|FLNB;nc|ENSG00000136068|O75369-8|FLNB;nc|ENSG00000136068|O75369-9|FLNB	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	8180	3376	11551
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11576	31.069	NaN	102360	30	0	10671	0.204				-1	RCHMAMTTL	9	111	560.7567862390015	1119.4990195448029	2	560.7586059570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_RC(Carbamidomethyl (C))HMAMTTL_	ENST00000368761.9_1_6:111901553-111912487:-|nuORF	66.42927471994793	0.16001998865088202	6				NaN	NaN	0	NaN	8195	3379	11575
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11577	31.073	NaN	20358	30	0	3924.1	0.106	+			24671	LGVRGVREL	9	74	333.54195372364484	997.6040317711345	3	333.5428161621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LGVRGVREL_	ENST00000394430.5_1_11:64511414-64511849:-|nuORF	41.42661286455405	0.403525789677298	6				NaN	NaN	0	NaN	8196	3379	11575
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11578	31.075	NaN	13704	30	0	2116.5	0.106				-1	 	0	93	364.88408188584174	1091.6304162577253	3	364.88519287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8197	3379	11575
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11579	31.077	NaN	34834	30	0	4652.7	0.106	+			8862	EEREPTPVL	9	102	535.2795047842836	1068.5444566353672	2	535.2799682617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EEREPTPVL_	ENSG00000120802|ENST00000556029|TMPO;nc|ENSG00000120802|P42166|TMPO;nc|ENSG00000120802|P42167-2|TMPO;nc|ENSG00000120802|P42167-3|TMPO;TMPO|p.L427Cfs*13|1|0.4|ENSG00000120802|chr12:98547767-98547767|T/-|frameshift_variant;TMPO|p.L427Ffs*18|1|0.28|ENSG00000120802|chr12:98547766-98547767|-/T|frameshift_variant;TMPO|p.R409Tfs*36|1|0.06|ENSG00000120802|chr12:98547707-98547708|-/A|frameshift_variant;TMPO|p.T99Lfs*12|2|0.34|ENSG00000120802|chr12:98527894-98527894|A/-|frameshift_variant	82.24051045832904	0.08786059719216216	6				NaN	NaN	0	NaN	8198	3379	11575
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11580	31.079	NaN	18449	30	0	2305	0.106	+			7353	DCVKTVWL	8	89	482.25192665741065	962.4893003816213	2	482.2531433105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DCVKTVWL_	ENSG00000178971|ENST00000651323|CTC1;ENST00000584842.1_1_17:8141634-8146421:-|nuORF;nc|ENSG00000178971|Q2NKJ3-2|CTC1	87.75429964447693	0.2842685068779738	6				NaN	NaN	0	NaN	8199	3379	11575
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11581	31.08	NaN	22541	30	0	2097.5	0.037			+	34041	RSLRRLDEE	9	92	587.3199994821192	1172.6254460310383	2	587.3217163085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RSLRRLDEE_	REV__ENSG00000083750|ENST00000374941|RRAGB;REV__ENSG00000155876|ENST00000380527|RRAGA;REV__ENST00000474757.1_1_X:55757854-55777647:+|nuORF;REV__nc|ENSG00000083750|Q5VZM2|RRAGB	68.62578634547417	0.14673074753754126	6				NaN	NaN	0	NaN	8200	3379	11575
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11582	31.081	NaN	11680	30	0	745.38	0.142				-1	EQACLIPCPR	10	76	593.7887462940703	1185.5629396549405	2	595.27490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_EQAC(Carbamidomethyl (C))LIPCPR_	ENSG00000144229|ENST00000409968|THSD7B;THSD7B|p.A1522Lfs*3|1|0.32|ENSG00000144229|chr2:137663476-137663476|A/-|frameshift_variant;THSD7B|p.A1522Sfs*2|1|0.16|ENSG00000144229|chr2:137663475-137663476|-/A|frameshift_variant;THSD7B|p.G509Dfs*58|2|0.23|ENSG00000144229|chr2:137160362-137160362|A/-|frameshift_variant;THSD7B|p.G671Afs*9|1|0.13|ENSG00000144229|chr2:137232992-137232992|G/-|frameshift_variant	26.69291269510374	0.6618461711292317	6				NaN	NaN	0	NaN	8201	3379	11575
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11600	31.12	NaN	143810	30	0	19665	0.14	+			43132	TERYMACKK	9	89	593.7887462940703	1185.5629396549405	2	593.79052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_TERYMAC(Carbamidomethyl (C))KK_	ENST00000535459.5_1_6:160103527-160109299:-|nuORF;ENST00000541573.5_1_6:160103527-160113001:-|nuORF;ENST00000546260.5_1_6:160103527-160113680:-|nuORF;nc|ENSG00000291237|P04179-2|SOD2;nc|ENSG00000291237|P04179-3|SOD2;nc|ENSG00000291237|P04179-4|SOD2;nc|ENSG00000291237|P04179|SOD2	74.25504064058377	0.12238981753128622	6				NaN	NaN	0	NaN	8216	3382	11599
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11601	31.122	NaN	73718	30	0	20151	0.106				-1	 	0	83	508.81460016794233	1015.6146474026847	2	508.81610107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8217	3382	11599
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11602	31.125	NaN	14090	30	0	2384.9	0.106	+			8765	EEHEVAVL	8	78	463.23441539782254	924.4542778624451	2	463.23468017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EEHEVAVL_	ENSG00000142089|ENST00000399808|IFITM3;ENSG00000185885|ENST00000408968|IFITM1;IFITM1|p.S16Afs*9|1|0.39|ENSG00000185885|chr11:314210-314210|C/-|frameshift_variant	65.89745868150666	0.44339748671293633	6				NaN	NaN	0	NaN	8218	3382	11599
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11603	31.126	NaN	13606	30	0	1331.3	0.106			+	46401	VEMIVIELTF	10	83	597.3281499244509	1192.6417469157018	2	597.3298950195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VEMIVIELTF_	REV__CADPS2|p.D1011Nfs*3|1|0.04|ENSG00000081803|chr7:122388716-122388717|-/ATGTATT|frameshift_variant;REV__CADPS2|p.I824*|1|0.21|ENSG00000081803|chr7:122438351-122438351|G/-|frameshift_variant;REV__CADPS2|p.N1185Tfs*15|1|0.4|ENSG00000081803|chr7:122345632-122345632|T/-|frameshift_variant;REV__CADPS2|p.S364P|1|0.24|ENSG00000081803|chr7:122621495-122621495|A/G|missense_variant;REV__ENSG00000081803|ENST00000449022|CADPS2;REV__nc|ENSG00000081803|Q86UW7-2|CADPS2;REV__nc|ENSG00000081803|Q86UW7-3|CADPS2	49.44154591367651	0.46214596422418036	6				NaN	NaN	0	NaN	8219	3382	11599
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11604	31.128	NaN	9569.2	30	0	3203.6	0.106	+			47574	VRKKGHGK	8	61	455.29085474374295	908.5671565542859	2	455.2918701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VRKKGHGK_	ENSG00000163510|ENST00000410053|CWC22	33.51558372728122	0.7005509609380386	6				NaN	NaN	0	NaN	8220	3382	11599
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11605	31.13	NaN	10275	30	0	641.94	0.106	+			49571	VYDTNPAKF	9	84	527.7638979598967	NaN	0	527.7639770507812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VYDTNPAKF_	ENSG00000139433|ENST00000318348|GLTP	90.60085204095205	0.040385177724871185	6				NaN	NaN	0	NaN	8221	3382	11599
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11606	31.132	NaN	18196	30	0	3814.4	0.036	+			50993	YIQEARNCL	9	92	555.2718637854393	1108.5291746376786	2	555.2741088867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YIQEARNCL_	ENSG00000143367|ENST00000368849|TUFT1;ENST00000461859.1_1_1:151535003-151537177:+|nuORF;nc|ENSG00000143367|Q9NNX1-2|TUFT1;nc|ENSG00000143367|Q9NNX1-3|TUFT1;TUFT1|p.V176Cfs*59|1|0.36|ENSG00000143367|chr1:151569698-151569707|GACGGTGCAG/-|frameshift_variant	95.81516180277367	0.04847050768394289	6				NaN	NaN	0	NaN	8222	3382	11599
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11624	31.168	NaN	70499	30	0	13429	0.18			+	31247	QHHPHWLI	8	97	534.2797613141536	1066.544969695107	2	534.2816162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QHHPHWLI_	REV__ENST00000348370.8_1_15:59373254-59373323:+|nuORF;REV__RNF111|p.P672Lfs*42|1|0.43|ENSG00000157450|chr15:59080997-59080997|C/-|frameshift_variant	53.351449002276354	0.5676011784961348	6				NaN	NaN	0	NaN	8237	3385	11623
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11625	31.171	NaN	101800	30	0	11981	0.106			+	3897	ATAQNIFLN	9	111	496.263994016807	990.513435100414	2	496.2656555175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATAQNIFLN_	REV__DNAH11|p.A2559Sfs*4|1|0.42|ENSG00000105877|chr7:21738723-21738724|-/A|frameshift_variant;REV__DNAH11|p.A4348Tfs*8|1|0.06|ENSG00000105877|chr7:21894990-21894991|-/CACTTTA|frameshift_variant;REV__DNAH11|p.C1251Mfs*5|1|0.41|ENSG00000105877|chr7:21606521-21606522|-/A|frameshift_variant;REV__DNAH11|p.C1849Sfs*8|1|0.05|ENSG00000105877|chr7:21683868-21683869|-/CTAAAATTCTCATAAATAG|frameshift_variant;REV__DNAH11|p.E3097Nfs*4|1|0.21|ENSG00000105877|chr7:21773946-21773946|A/-|frameshift_variant;REV__DNAH11|p.K1250Nfs*43|1|0.63|ENSG00000105877|chr7:21606522-21606522|A/-|frameshift_variant;REV__DNAH11|p.K873Nfs*4|1|0.31|ENSG00000105877|chr7:21591523-21591523|A/-|frameshift_variant;REV__DNAH11|p.L3180Sfs*6|1|0.05|ENSG00000105877|chr7:21784481-21784482|-/CAGA|frameshift_variant;REV__DNAH11|p.L441Ifs*25|1|0.26|ENSG00000105877|chr7:21570187-21570188|-/A|frameshift_variant;REV__DNAH11|p.N2201Kfs*6|1|0.04|ENSG00000105877|chr7:21707754-21707755|-/AGTAAAAGATTTC|frameshift_variant;REV__DNAH11|p.N3090Kfs*2|1|0.09|ENSG00000105877|chr7:21773928-21773929|-/A|frameshift_variant;REV__DNAH11|p.N833Tfs*2|1|0.17|ENSG00000105877|chr7:21591404-21591404|A/-|frameshift_variant;REV__DNAH11|p.Q945Kfs*4|1|0.32|ENSG00000105877|chr7:21599946-21599946|T/-|frameshift_variant;REV__DNAH11|p.S2374Qfs*2|1|0.14|ENSG00000105877|chr7:21717910-21717911|-/C|frameshift_variant;REV__DNAH11|p.T4414Nfs*34|1|0.37|ENSG00000105877|chr7:21900050-21900051|-/A|frameshift_variant;REV__DNAH11|p.T4414Qfs*72|3|0.34|ENSG00000105877|chr7:21900051-21900051|A/-|frameshift_variant;REV__DNAH11|p.W2255Mfs*9|1|0.04|ENSG00000105877|chr7:21710627-21710628|-/A|frameshift_variant;REV__ENSG00000105877|ENST00000409508|DNAH11	115.49404669440601	0.023927554121326553	6				NaN	NaN	0	NaN	8238	3385	11623
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11626	31.173	NaN	110160	30	0	53396	0.106			+	26371	LTCVTKKKM	9	101	554.8142138645646	1107.6138747959292	2	554.8164672851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LTC(Carbamidomethyl (C))VTKKKM_	REV__ENSG00000139218|ENST00000369367|SCAF11;REV__ENST00000474828.1_1_12:46355467-46384201:-|nuORF;REV__ENST00000547018.5_1_12:46345524-46385838:-|nuORF;REV__SCAF11|p.K104Nfs*3|1|0.09|ENSG00000139218|chr12:45948523-45948523|T/-|frameshift_variant;REV__SCAF11|p.K853Rfs*46|1|0.06|ENSG00000139218|chr12:45927143-45927143|T/-|frameshift_variant;REV__SCAF11|p.L495Tfs*9|1|0.07|ENSG00000139218|chr12:45928218-45928219|-/T|frameshift_variant;REV__SCAF11|p.P271Sfs*56|1|0.32|ENSG00000139218|chr12:45931536-45931537|-/A|frameshift_variant;REV__SCAF11|p.Q105Tfs*11|1|0.19|ENSG00000139218|chr12:45948522-45948523|-/T|frameshift_variant;REV__SCAF11|p.Q367Afs*32|1|0.18|ENSG00000139218|chr12:45928603-45928604|-/T|frameshift_variant;REV__SCAF11|p.Q86Rfs*17|1|0.08|ENSG00000139218|chr12:45951691-45951691|G/-|frameshift_variant;REV__SCAF11|p.T602Qfs*5|1|0.33|ENSG00000139218|chr12:45927897-45927897|T/-|frameshift_variant	104.0567914643314	0.03506238181059741	6				NaN	NaN	0	NaN	8239	3385	11623
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11627	31.175	NaN	82767	30	0	19092	0.106	+			22419	KTKMKQMTL	9	84	370.21190512170097	1107.6138859653029	3	370.213134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTKMKQMTL_	BAZ1B|p.A1298Cfs*10|1|0.16|ENSG00000009954|chr7:73444083-73444084|-/G|frameshift_variant;BAZ1B|p.E800Kfs*16|1|0.08|ENSG00000009954|chr7:73477067-73477067|C/-|frameshift_variant;ENSG00000009954|ENST00000339594|BAZ1B;nc|ENSG00000009954|Q9UIG0-2|BAZ1B	47.657333605630114	0.33044192980041115	6				NaN	NaN	0	NaN	8240	3385	11623
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11628	31.176	NaN	8834.4	30	0	1723.4	0.106			+	21325	KLTQPVDKQI	10	87	585.3485634988355	1168.6825740644708	2	585.3505249023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KLTQPVDKQI_	REV__ENSG00000167139|ENST00000300504|TBC1D21;REV__nc|ENSG00000167139|Q8IYX1-2|TBC1D21	83.6470233535746	0.16744595502813267	6				NaN	NaN	0	NaN	8241	3385	11623
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11629	31.178	NaN	11684	30	0	961.44	0.106			+	37826	SMRPQGCAL	9	85	481.73136871911555	961.4481845050311	2	481.7323913574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SMRPQGCAL_	REV__chr16:2785646-2785799|281|11.53|0.22|5.74|-|ENST00000571674|PRSS33,PRSS33	71.29570347882199	0.13518600952103718	6				NaN	NaN	0	NaN	8242	3385	11623
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11630	31.18	NaN	16545	30	0	3590.2	0.037	+			29448	PCLKMDKKK	9	69	364.20847997083763	1089.603610512713	3	364.2095642089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PCLKMDKKK_	ENST00000378588.4_1_X:37670194-37670278:+|nuORF	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	8243	3385	11623
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11648	31.217	NaN	29412	30	0	4013.2	0.214				-1	 	0	95	511.30857775910965	1020.6026025850193	2	511.31005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8258	3388	11647
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11649	31.221	NaN	25169	30	0	7403.1	0.106	+			44984	TVDDRRRF	8	85	355.52445435991723	1063.5515336799517	3	355.525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVDDRRRF_	sp|F5HF23|RL5A_HCMVMProteinRL5AOS=Humancytomegalovirus(strainMerlin)OX=295027GN=RL5APE=4SV=1	35.200714571348534	0.6875396545722289	6				NaN	NaN	0	NaN	8259	3388	11647
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11650	31.223	NaN	11733	30	0	3204.7	0.106	+			11548	FPIFFLYMM	9	81	604.7969996687717	1207.5794464043433	2	604.798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FPIFFLYMM_	ENSG00000102893|ENST00000323584|PHKB;nc|ENSG00000102893|Q93100-2|PHKB;nc|ENSG00000102893|Q93100-3|PHKB;nc|ENSG00000102893|Q93100-4|PHKB;PHKB|p.G644Efs*2|1|0.12|ENSG00000102893|chr16:47650874-47650874|A/-|frameshift_variant;PHKB|p.L392*|1|0.37|ENSG00000102893|chr16:47594182-47594182|T/-|frameshift_variant;PHKB|p.N422Ifs*52|1|0.46|ENSG00000102893|chr16:47596427-47596427|A/-|frameshift_variant	49.21078951299608	0.3122205139198386	6				NaN	NaN	0	NaN	8260	3388	11647
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11651	31.225	NaN	8694.6	30	0	1443.8	0.106			+	49613	VYGVMCKQGA	10	71	528.2578643084788	NaN	0	528.2559204101562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VYGVMCKQGA_	REV__ENSG00000151572|ENST00000392977|ANO4;REV__nc|ENSG00000151572|Q32M45-2|ANO4;REV__nc|ENSG00000151572|Q32M45-3|ANO4	30.503639358989545	0.4000169810673414	6				NaN	NaN	0	NaN	8261	3388	11647
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11652	31.227	NaN	11080	30	0	1452	0.106	+			6810	CGQLPPWSF	9	83	517.7411409267581	1033.4677289203162	2	517.7428588867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_CGQLPPWSF_	ENSG00000162413|ENST00000377658|KLHL21;nc|ENSG00000162413|Q9UJP4-2|KLHL21	55.50420428727701	0.2510918378945873	6				NaN	NaN	0	NaN	8262	3388	11647
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11653	31.229	NaN	7712.5	30	0	2770.1	0.04				-1	AKYYKMEIVNP	11	80	686.3523971008829	1370.6902412685656	2	686.3536376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_AKYYKM(Oxidation (M))EIVNP_	ANO3|p.F764Lfs*11|1|0.14|ENSG00000134343|chr11:26643195-26643195|T/-|frameshift_variant;ANO3|p.I617Lfs*8|1|0.05|ENSG00000134343|chr11:26624469-26624469|A/-|frameshift_variant;ANO3|p.L701*|1|0.45|ENSG00000134343|chr11:26639198-26639198|T/-|frameshift_variant;ENSG00000134343|ENST00000256737|ANO3;nc|ENSG00000134343|Q9BYT9-2|ANO3	28.081489160057373	0.6952392775027776	6				NaN	NaN	0	NaN	8263	3388	11647
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11654	31.229	NaN	10568	30	0	943.32	0.142				-1	LCMLMRKA	8	77	491.253851038328	980.493149143456	2	491.7548522949219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_LCMLM(Oxidation (M))RKA_	ENST00000254508.6_1_3:13372048-13372099:-|nuORF	44.53106598305862	0.628196326904373	6				NaN	NaN	0	NaN	8264	3388	11647
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11672	31.268	NaN	28067	30	0	2207.1	0.214	+			38398	SRYFYCKI	8	97	540.2693928253757	1078.5242327175513	2	540.7692260742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SRYFYCKI_	ENSG00000082014|ENST00000262188|SMARCD3;ENST00000469154.5_1_7:150936191-150937662:-|nuORF;ENST00000470588.1_1_7:150936191-150937494:-|nuORF;nc|ENSG00000082014|Q6STE5-2|SMARCD3	63.30626980617807	0.4690498839812213	6				NaN	NaN	0	NaN	8279	3391	11671
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11673	31.272	NaN	9600	30	0	1527.1	0.106			+	-1	HTFRKLSM	8	80	518.2752551345527	1034.5359573359053	2	518.2772216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_HTFRKLSM(Oxidation (M))_	REV__tr|U7STT1|U7STT1_FUSNUbis(5'-nucleosyl)-tetraphosphatase(symmetrical)OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01178PE=4SV=1	38.80614096846853	0.6637206697844082	6				NaN	NaN	0	NaN	8280	3391	11671
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11674	31.274	NaN	6476.8	30	0	439.63	0.106				-1	KEFVRCLLAT	10	84	618.8435893001122	1235.6726256670242	2	618.8455200195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_KEFVRC(Carbamidomethyl (C))LLAT_	ENST00000434597.2_1_9:37477166-37477928:+|nuORF	68.84614121027924	0.2867470276772903	6				NaN	NaN	0	NaN	8281	3391	11671
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11675	31.276	NaN	11370	30	0	2817.2	0.106	+			48451	VTLDQVRNI	9	69	353.20612972954575	NaN	0	353.2060852050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTLDQVRNI_	ENSG00000165118|ENST00000376344|C9orf64	34.172542307311794	0.30503706118289736	6				NaN	NaN	0	NaN	8282	3391	11671
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11676	31.278	NaN	6835	30	0	759.16	0.106			+	9693	EMALPLPL	8	64	442.2521313934094	882.4897098536188	2	442.2532043457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EMALPLPL_	REV__nc|ENSG00000100320|O43251-4|RBFOX2;REV__nc|ENSG00000100320|O43251-7|RBFOX2;REV__nc|ENSG00000100320|O43251-9|RBFOX2	39.021493756699265	0.6623843612266921	6				NaN	NaN	0	NaN	8283	3391	11671
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11677	31.28	NaN	18666	30	0	3414.3	0.038	+			7861	DRCITQLFF	9	91	600.2971876843872	1198.5798224355742	2	600.2991943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_DRC(Carbamidomethyl (C))ITQLFF_	ENSG00000221996|ENST00000624801|OR52B4	58.22992032128504	0.22837015374068087	6				NaN	NaN	0	NaN	8284	3391	11671
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11678	31.28	NaN	13936	30	0	2939.4	0.141			+	-1	GLMMLTAAR	9	87	490.2566889537659	978.4988249743318	2	490.2579040527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_GLM(Oxidation (M))MLTAAR_	REV__DNAJC7|p.N369Mfs*6|3|0.26|ENSG00000168259|chr17:41982380-41982380|T/-|frameshift_variant;REV__ENSG00000168259|ENST00000457167|DNAJC7;REV__nc|ENSG00000168259|Q99615-2|DNAJC7	55.50420428727701	0.2510918378945873	6				NaN	NaN	0	NaN	8285	3391	11671
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11693	31.312	NaN	53067	30	0	4988.7	0.214				-1	SGVCCKQKL	9	97	540.2693928253757	1078.5242327175513	2	540.2725219726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_SGVC(Carbamidomethyl (C))C(Carbamidomethyl (C))KQKL_	ENSG00000197563|ENST00000640252|PIGN	99.37495909608758	0.03983967222258828	6				NaN	NaN	0	NaN	8297	3394	11692
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11694	31.316	NaN	19273	30	0	1504.1	0.106	+			26253	LSSSSRRSLV	10	88	546.3118161644978	1090.6090793957956	2	546.3141479492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSSSSRRSLV_	BIN2|p.T500Hfs*24|1|0.33|ENSG00000110934|chr12:51291608-51291609|-/G|frameshift_variant;ENSG00000110934|ENST00000615107|BIN2;ENST00000605039.5_1_12:51675285-51695971:-|nuORF;nc|ENSG00000110934|Q9UBW5-2|BIN2;nc|ENSG00000110934|Q9UBW5-3|BIN2	48.601550744091256	0.46988609897316763	6				NaN	NaN	0	NaN	8298	3394	11692
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11695	31.318	NaN	38393	30	0	4109	0.106				-1	 	0	94	651.8469673536018	1301.6793817740036	2	651.848876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8299	3394	11692
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11696	31.32	NaN	36451	30	0	6612.4	0.106			+	7775	DPDQEEHGAPL	11	93	604.2652418362549	1206.5159307393096	2	604.2672729492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DPDQEEHGAPL_	REV__ENST00000441343.5_1_19:42471885-42472978:-|nuORF	61.691277971877994	0.30835813808799384	6				NaN	NaN	0	NaN	8300	3394	11692
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11697	31.322	NaN	66365	30	0	19905	0.106	+			2771	ARLRDLYPD	9	109	373.53694813357436	1117.5890150009232	3	373.538330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ARLRDLYPD_	ENSG00000185013|ENST00000304081|NT5C1B;nc|ENSG00000185013|Q96P26-3|NT5C1B;nc|ENSG00000185013|Q96P26-4|NT5C1B;nc|ENSG00000185013|Q96P26|NT5C1B	45.9519527083369	0.35044536499095585	6				NaN	NaN	0	NaN	8301	3394	11692
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11698	31.324	NaN	21927	30	0	3129	0.036			+	-1	LSGGVHVQNM	10	87	529.2584443948231	1056.502335856446	2	529.2603759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_LSGGVHVQNM(Oxidation (M))_	REV__ENSG00000162413|ENST00000377658|KLHL21	45.97224482568171	0.49411383603842696	6				NaN	NaN	0	NaN	8302	3394	11692
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11699	31.324	NaN	39353	30	0	7701.8	0.145			+	37643	SLQLSLQLQR	10	101	395.9032937627255	1184.6880518883765	3	395.9045715332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SLQLSLQLQR_	REV__GPRIN3|p.Q380Rfs*61|1|0.42|ENSG00000185477|chr4:89248973-89248973|G/-|frameshift_variant	63.42647028704847	0.33467688528802414	6				NaN	NaN	0	NaN	8303	3394	11692
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11717	31.364	NaN	148850	30	0	32785	0.165	+			18226	INLFVSAILM	10	115	560.8257179015229	1119.6368828698457	2	560.8276977539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_INLFVSAILM_	ENSG00000277481|ENST00000620267|PKD1L3	72.87924865735499	0.25379688738724415	6				NaN	NaN	0	NaN	8318	3397	11716
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11718	31.366	NaN	27703	30	0	6247.4	0.106	+			13302	GKDPEGRALLA	11	68	376.2121318622785	1125.6145661870355	3	376.2133483886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GKDPEGRALLA_	tr|U7SH45|U7SH45_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02178PE=4SV=1	28.5767321226876	0.690044582712672	6				NaN	NaN	0	NaN	8319	3397	11716
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11719	31.368	NaN	15014	30	0	2722.1	0.106				-1	 	0	78	406.23597564516206	810.4573983571241	2	406.2371826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8320	3397	11716
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11720	31.37	NaN	25607	30	0	2253.2	0.106	+			41524	SVPVENFTI	9	89	503.26517407315345	1004.5157952131069	2	503.26788330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVPVENFTI_	ENSG00000105953|ENST00000222673|OGDH;nc|ENSG00000105953|Q02218-2|OGDH;OGDH|p.N950Qfs*3|2|0.28|ENSG00000105953|chr7:44707628-44707629|-/C|frameshift_variant	69.6276240434122	0.14239879520340665	6				NaN	NaN	0	NaN	8321	3397	11716
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11721	31.372	NaN	11895	30	0	1050.2	0.106			+	8367	EALREIKKQA	10	86	593.3516260994824	1184.6886992657646	2	593.353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EALREIKKQA_	REV__ENSG00000174740|ENST00000312600|PABPC5;REV__nc|ENSG00000174740|Q96DU9-2|PABPC5	72.2432373244024	0.2589930451692646	6				NaN	NaN	0	NaN	8322	3397	11716
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11722	31.374	NaN	49125	30	0	6599	0.106				-1	 	0	103	458.7465749557392	915.4785969782785	2	458.747802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8323	3397	11716
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11723	31.376	NaN	7926.7	30	0	1185.9	0.035				-1	 	0	86	514.3095261602671	513.302249693667	1	514.3112182617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8324	3397	11716
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11741	31.413	NaN	34640	30	0	7336.7	0.214				-1	 	0	93	529.7941641949784	1057.5737754567567	2	529.7959594726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8339	3400	11740
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11742	31.417	NaN	33974	30	0	8529.1	0.106			+	-1	HQQEVSCHEE	10	84	641.7593115164881	1281.504070099776	2	641.7614135742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_HQQEVSC(Carbamidomethyl (C))HEE_	REV__PLCG2|p.R415H|1|0.37|ENSG00000197943|chr16:81900662-81900662|G/A|missense_variant	38.753607047826485	0.5606299674732264	6				NaN	NaN	0	NaN	8340	3400	11740
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11743	31.419	NaN	32622	30	0	3077.5	0.106	+			15843	GWNQSISSL	9	94	496.24579508918265	990.4770372451653	2	496.2472839355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GWNQSISSL_	ENSG00000135740|ENST00000299798|SLC9A5	68.78682469695295	0.14603441672067394	6				NaN	NaN	0	NaN	8341	3400	11740
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11744	31.421	NaN	33693	30	0	15636	0.106			+	-1	YACGQRKMM	9	81	572.7565957179379	1143.4986385026757	2	572.7583618164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_YAC(Carbamidomethyl (C))GQRKMM_	REV__ENST00000481133.1_1_1:52930767-52933858:-|nuORF	55.50420428727701	0.2510918378945873	6				NaN	NaN	0	NaN	8342	3400	11740
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11745	31.422	NaN	43508	30	0	8206.4	0.106			+	45189	TVMVVVFNK	9	98	526.7948097625922	1051.5750665919843	2	526.7970581054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_TVM(Oxidation (M))VVVFNK_	REV__ENSG00000119318|ENST00000358015|RAD23B;REV__ENSG00000179262|ENST00000586534|RAD23A;REV__ENST00000588329.5_1_19:13056723-13059660:+|nuORF;REV__nc|ENSG00000179262|P54725-2|RAD23A;REV__nc|ENSG00000179262|P54725-3|RAD23A	66.42927471994793	0.16001998865088202	6				NaN	NaN	0	NaN	8343	3400	11740
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11746	31.424	NaN	24462	30	0	1764.6	0.038	+			4461	ATINNPNLLTK	11	94	599.8418796195907	1197.6692063059813	2	599.8432006835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATINNPNLLTK_	DDX60L|p.A1208Vfs*33|1|0.16|ENSG00000181381|chr4:168395993-168395994|-/CTTTGACA|frameshift_variant;DDX60L|p.F1291Lfs*11|1|0.38|ENSG00000181381|chr4:168391582-168391582|A/-|frameshift_variant;DDX60L|p.N1040Kfs*4|1|0.03|ENSG00000181381|chr4:168406043-168406044|-/AT|frameshift_variant;DDX60L|p.N1168Tfs*25|2|0.3|ENSG00000181381|chr4:168396113-168396113|T/-|frameshift_variant;DDX60L|p.N1642Mfs*9|1|0.2|ENSG00000181381|chr4:168371615-168371615|T/-|frameshift_variant;DDX60L|p.R1122Efs*29|1|0.05|ENSG00000181381|chr4:168400953-168400953|T/-|frameshift_variant;ENSG00000181381|ENST00000682922|DDX60L;nc|ENSG00000181381|Q5H9U9-2|DDX60L	133.7523857240709	0.0010046400317632145	6				NaN	NaN	0	NaN	8344	3400	11740
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11747	31.425	NaN	17724	30	0	4784.5	0.148	+			34047	RSLWRTMSRQ	10	78	440.90280925454044	1319.6865983638213	3	440.90399169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RSLWRTMSRQ_	ENST00000529835.6_1_11:10471944-10503658:+|nuORF	27.047317107675042	0.6589519614906109	6				NaN	NaN	0	NaN	8345	3400	11740
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11765	31.464	NaN	67097	30	0	9119.6	0.214				-1	LFMDLWPN	8	111	526.2500852800703	1050.4856176269404	2	526.2515258789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LFM(Oxidation (M))DLWPN_	ENST00000319357.5_1_7:43664482-43664539:+|nuORF	76.84663266511073	0.3498490246073164	6				NaN	NaN	0	NaN	8360	3403	11764
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11766	31.468	NaN	63071	30	0	4858.2	0.106	+			10666	EYRTGISWS	9	90	549.7644751983698	1097.5143974635396	2	549.766357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EYRTGISWS_	sp|P16733|GM_HCMVAEnvelopeglycoproteinMOS=Humancytomegalovirus(strainAD169)OX=10360GN=gMPE=1SV=1;sp|Q6SW43|GM_HCMVMEnvelopeglycoproteinMOS=Humancytomegalovirus(strainMerlin)OX=295027GN=gMPE=3SV=1	56.43379154798735	0.2433427591689151	6				NaN	NaN	0	NaN	8361	3403	11764
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11767	31.47	NaN	26167	30	0	2287	0.106			+	1978	AKAGRGRSI	9	93	458.2776371233358	914.5407213134716	2	458.27880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AKAGRGRSI_	REV__ENSG00000134007|ENST00000256389|ADAM20	49.44154591367651	0.3095138337212152	6				NaN	NaN	0	NaN	8362	3403	11764
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11768	31.472	NaN	14289	30	0	3425.3	0.106	+			28548	NISHHTTVPL	10	80	559.8018916544437	1117.5892303756873	2	559.8035888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NISHHTTVPL_	DOCK7|p.F1091Lfs*4|1|0.38|ENSG00000116641|chr1:62539572-62539572|A/-|frameshift_variant;DOCK7|p.F1836Dfs*12|1|0.05|ENSG00000116641|chr1:62477795-62477796|-/TGTC|frameshift_variant;DOCK7|p.F473Lfs*8|1|0.16|ENSG00000116641|chr1:62625265-62625265|A/-|frameshift_variant;ENSG00000116641|ENST00000635253|DOCK7;nc|ENSG00000116641|Q96N67-2|DOCK7;nc|ENSG00000116641|Q96N67-3|DOCK7;nc|ENSG00000116641|Q96N67-4|DOCK7;nc|ENSG00000116641|Q96N67-5|DOCK7;nc|ENSG00000116641|Q96N67-6|DOCK7;nc|ENSG00000116641|Q96N67-7|DOCK7	49.44154591367651	0.46214596422418036	6				NaN	NaN	0	NaN	8363	3403	11764
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11769	31.474	NaN	12666	30	0	1854.2	0.106	+			2929	ASCQYSLLK	9	84	535.2696931609756	1068.5248333887512	2	535.271240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_ASC(Carbamidomethyl (C))QYSLLK_	ENSG00000100731|ENST00000304743|PCNX1;ENSG00000135749|ENST00000258229|PCNX2;ENSG00000197136|ENST00000355703|PCNX3;ENST00000324142.4_1_1:233337898-233388268:-|nuORF;ENST00000475463.6_1_1:233201380-233353905:-|nuORF;ENST00000519530.1_1_1:233353734-233362997:-|nuORF;nc|ENSG00000100731|Q96RV3-3|PCNX1;nc|ENSG00000100731|Q96RV3-4|PCNX1;nc|ENSG00000135749|A6NKB5-2|PCNX2;nc|ENSG00000135749|A6NKB5-5|PCNX2;nc|ENSG00000197136|Q9H6A9-2|PCNX3	120.30596017624542	0.02101454110788768	6				NaN	NaN	0	NaN	8364	3403	11764
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11770	31.475	NaN	34535	30	0	3318.7	0.037				-1	SMEYCVLLF	9	109	560.7567862390015	1119.4990195448029	2	561.2611694335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_SM(Oxidation (M))EYCVLLF_	ENSG00000168813|ENST00000355898|ZNF507;ENST00000586664.1_1_19:32873361-32873986:+|nuORF	37.15910966729921	0.4535818937225704	6				NaN	NaN	0	NaN	8365	3403	11764
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11771	31.476	NaN	8944	30	0	1777	0.14	+			12985	GETSTDLKL	9	80	482.25211526128066	962.4896775893613	2	482.2530517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GETSTDLKL_	ENSG00000144028|ENST00000323853|SNRNP200;ENST00000480242.1_1_2:96950056-96950410:-|nuORF;ENST00000497539.5_1_2:96940752-96950410:-|nuORF	44.377184641726394	0.36891676396732553	6				NaN	NaN	0	NaN	8366	3403	11764
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11789	31.515	NaN	128100	30	0	19221	0.161	+			35410	SAQSFFENK	9	98	529.2501842035693	1056.4858154739386	2	529.2516479492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAQSFFENK_	ENSG00000136758|ENST00000376016|YME1L1;nc|ENSG00000136758|Q96TA2-3|YME1L1;nc|ENSG00000136758|Q96TA2|YME1L1;YME1L1|p.N311Tfs*18|1|0.26|ENSG00000136758|chr10:27134053-27134053|T/-|frameshift_variant	166.0711670676379	0.003437550387609957	6				NaN	NaN	0	NaN	8381	3406	11788
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11790	31.518	NaN	19307	30	0	3971.2	0.106	+			15774	GVTDVVITR	9	90	480.27841365803243	958.5422743828649	2	480.27960205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GVTDVVITR_	ENSG00000181396|ENST00000313056|OGFOD3;nc|ENSG00000181396|Q6PK18-2|OGFOD3	117.81106730687013	0.02252488733980868	6				NaN	NaN	0	NaN	8382	3406	11788
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11791	31.52	NaN	10445	30	0	920.54	0.106			+	27319	MHIKPMKF	8	84	532.2759376915792	1062.5373224499583	2	532.2797241210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Oxidation (M)	_M(Oxidation (M))HIKPM(Oxidation (M))KF_	REV__AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;REV__ENSG00000124942|ENST00000378024|AHNAK	71.37791200682192	0.3954169775488141	6				NaN	NaN	0	NaN	8383	3406	11788
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11792	31.522	NaN	9914.4	30	0	1012.9	0.106				-1	 	0	68	465.7468514649429	929.4791499966858	2	465.74822998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8384	3406	11788
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11793	31.524	NaN	26872	30	0	8999	0.106				-1	 	0	73	423.2150792261546	844.4156055191092	2	423.21624755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8385	3406	11788
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11794	31.525	NaN	11590	30	0	1079.7	0.106	+			24388	LFVFNFVF	8	93	516.7816398272826	1031.548726721365	2	516.7899780273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LFVFNFVF_	ENSG00000110651|ENST00000263645|CD81	77.94384346573518	0.3407065481025094	6				NaN	NaN	0	NaN	8386	3406	11788
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11795	31.527	NaN	17032	30	0	955.45	0.035	+			36780	SIAQCGGRVP	10	97	494.2577508107103	NaN	0	494.2586975097656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SIAQCGGRVP_	CUBN|p.F2548Sfs*50|1|0.3|ENSG00000107611|chr10:16907570-16907570|A/-|frameshift_variant;CUBN|p.F3041Lfs*38|1|0.06|ENSG00000107611|chr10:16874487-16874488|-/GCTTTCTT|frameshift_variant;CUBN|p.L2960Ffs*41|1|0.39|ENSG00000107611|chr10:16888438-16888442|AAGTC/-|frameshift_variant;CUBN|p.V3542Cfs*18|1|0.17|ENSG00000107611|chr10:16828945-16828946|-/A|frameshift_variant;ENSG00000107611|ENST00000377833|CUBN	54.776311868738084	0.27540594196716844	6				NaN	NaN	0	NaN	8387	3406	11788
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11813	31.565	NaN	236510	30	0	174960	0.152				-1	 	0	97	350.2057235454021	698.3968941576043	2	350.2068786621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8402	3409	11812
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11814	31.567	NaN	85152	30	0	14400	0.088				-1	 	0	79	372.20056307084593	742.3865732084919	2	372.2017517089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8403	3409	11812
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11815	31.569	NaN	237650	30	0	35181	0.106	+			31953	QQRQRQQQ	8	126	550.2906210002498	1098.5666890672994	2	550.2935180664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QQRQRQQQ_	ENSG00000204442|ENST00000375915|NALF1;ENST00000512215.5_1_4:102268380-102268632:-|nuORF;REV__ENSG00000204442|ENST00000375915|NALF1;REV__ENST00000512215.5_1_4:102268380-102268632:-|nuORF	76.84663266511073	0.3498490246073164	6				NaN	NaN	0	NaN	8404	3409	11812
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11816	31.571	NaN	73422	30	0	9336.8	0.106	+			44194	TRDRDSGRLK	10	101	602.330934877181	1202.647316821162	2	602.3331909179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TRDRDSGRLK_	ENSG00000185379|ENST00000345365|RAD51D;nc|ENSG00000185379|O75771-3|RAD51D;nc|ENSG00000185379|O75771-4|RAD51D;nc|ENSG00000185379|O75771-5|RAD51D;nc|ENSG00000185379|O75771-8|RAD51D	101.60071028292904	0.07294315263144992	6				NaN	NaN	0	NaN	8405	3409	11812
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11817	31.573	NaN	38197	30	0	7638.2	0.106				-1	 	0	100	458.2652089593542	914.5158649855084	2	458.26654052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8406	3409	11812
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11818	31.575	NaN	16027	30	0	1644.3	0.106	+			937	AEILQESRM	9	80	538.7724998533173	1075.5304467734345	2	538.7745361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEILQESRM_	ENSG00000171530|ENST00000380377|TBCA;ENST00000436520.1_1_X:33059580-33059835:+|nuORF;nc|ENSG00000171530|O75347-2|TBCA	70.39856735676683	0.13906523160059378	6				NaN	NaN	0	NaN	8407	3409	11812
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11819	31.576	NaN	10594	30	0	1388.4	0.035			+	30303	PTLPPPPDPP	10	84	514.2773468157579	1026.5401406983158	2	514.2784423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PTLPPPPDPP_	REV__ENST00000601816.3_1_19:50364595-50365005:-|nuORF	82.24051045832904	0.17731618517892733	6				NaN	NaN	0	NaN	8408	3409	11812
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11837	31.611	NaN	52498	30	0	4342.6	0.214				-1	 	0	79	466.2568261622325	930.4990993912651	2	466.25799560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8423	3412	11836
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11838	31.614	NaN	9184.2	30	0	2047.9	0.106				-1	 	0	78	485.2888843499173	968.5632157666346	2	485.28985595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8424	3412	11836
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11839	31.616	NaN	9954.7	30	0	700.86	0.106			+	47108	VLLVCVCLQ	9	84	495.2783655023233	988.5421780714466	2	495.2790832519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VLLVCVCLQ_	REV__ENSG00000184601|ENST00000557649|C14orf180	60.29395666154354	0.21116425950210296	6				NaN	NaN	0	NaN	8425	3412	11836
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11840	31.618	NaN	11762	30	0	1196.8	0.106				-1	 	0	71	510.2960603211745	1018.577567709149	2	510.2976989746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8426	3412	11836
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11841	31.62	NaN	6304.5	30	0	690.69	0.106				-1	 	0	71	474.2452322316185	473.2379557650185	1	474.24627685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8427	3412	11836
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11842	31.622	NaN	7515.4	30	0	839.03	0.106			+	25215	LMMMSVNEK	9	80	557.7512654171634	1113.4879779011267	2	557.7536010742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Oxidation (M)	_LM(Oxidation (M))MM(Oxidation (M))SVNEK_	REV__ENSG00000173769|ENST00000309765|TOPAZ1;REV__TOPAZ1|p.K985Sfs*8|1|0.12|ENSG00000173769|chr3:44256274-44256274|A/-|frameshift_variant;REV__TOPAZ1|p.N1080Mfs*9|1|0.27|ENSG00000173769|chr3:44269288-44269288|A/-|frameshift_variant;REV__TOPAZ1|p.P1029Tfs*26|1|0.18|ENSG00000173769|chr3:44267057-44267058|-/A|frameshift_variant	65.80317337860623	0.1652391959156183	6				NaN	NaN	0	NaN	8428	3412	11836
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11843	31.624	NaN	10927	30	0	2189.1	0.037				-1	MIKKMYEGF	9	83	581.7843386396723	1161.5541243461446	2	581.7854614257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_M(Oxidation (M))IKKMYEGF_	tr|U7T1H7|U7T1H7_FUSNUHTHmarR-typedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00648PE=4SV=1	47.91560031466742	0.327412564698279	6				NaN	NaN	0	NaN	8429	3412	11836
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11861	31.66	NaN	42940	30	0	3348.5	0.214	+			12300	GCYRDLKF	8	98	529.7591244490471	1057.5036959648942	2	529.7607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GC(Carbamidomethyl (C))YRDLKF_	ENSG00000145536|ENST00000274181|ADAMTS16;nc|ENSG00000145536|Q8TE57-2|ADAMTS16	106.41520541750704	0.2471395129373963	6				NaN	NaN	0	NaN	8444	3415	11860
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11862	31.664	NaN	11784	30	0	1082.9	0.106			+	34146	RSVSRVRP	8	78	478.7912543139343	955.5679556946686	2	478.7922668457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RSVSRVRP_	REV__ENST00000248846.9_2_22:50664617-50678653:-|nuORF	68.78682469695295	0.41700713582915416	6				NaN	NaN	0	NaN	8445	3415	11860
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11863	31.666	NaN	12265	30	0	3709.6	0.106	+			29724	PHMAHVPQVI	10	74	564.8026023640048	1127.5906517948094	2	564.8045043945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PHMAHVPQVI_	ENST00000468920.2_1_12:111893805-111895209:-|nuORF;ENST00000482777.5_1_12:111893805-111908601:-|nuORF;nc|ENSG00000204842|Q99700-3|ATXN2	37.15910966729921	0.575322462179216	6				NaN	NaN	0	NaN	8446	3415	11860
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11864	31.668	NaN	16336	30	0	1536.9	0.106			+	6764	CEGARKTKMR	10	75	626.8159851185452	1251.6174173038903	2	626.818115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_C(Carbamidomethyl (C))EGARKTKM(Oxidation (M))R_	REV__ENST00000534591.1_1_11:64876790-64877821:+|nuORF	82.7504851949679	0.1731497355276012	6				NaN	NaN	0	NaN	8447	3415	11860
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11865	31.669	NaN	10533	30	0	1722.2	0.106			+	20483	KEYKQLAK	8	84	336.5344378546052	NaN	0	336.5343322753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEYKQLAK_	REV__CCT5|p.D273E|1|0.12|ENSG00000150753|chr5:10258481-10258481|T/G|missense_variant;REV__ENSG00000150753|ENST00000280326|CCT5;REV__ENST00000423695.6_1_5:10250480-10261980:+|nuORF;REV__ENST00000432974.1_1_13:79483649-79483910:+|nuORF;REV__ENST00000509846.1_1_5:10258500-10261038:+|nuORF;REV__nc|ENSG00000150753|P48643-2|CCT5	20.94693142431847	1.7418937515398478	6				NaN	NaN	0	NaN	8448	3415	11860
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11866	31.671	NaN	15442	30	0	1157.1	0.037				-1	KMGRKDSLDL	10	88	589.8134431274476	1177.6123333216951	2	589.8160400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_KM(Oxidation (M))GRKDSLDL_	ENSG00000137824|ENST00000338376|RMDN3;nc|ENSG00000137824|Q96TC7-2|RMDN3	71.87747018426188	0.26198133118427214	6				NaN	NaN	0	NaN	8449	3415	11860
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11867	31.672	NaN	6564.7	30	0	1262.5	0.141	+			14952	GTMMETLSR	9	73	513.2412257792491	1024.4678986252982	2	513.2421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GTMMETLSR_	ENSG00000130383|ENST00000588525|FUT5;ENSG00000156413|ENST00000318336|FUT6;ENSG00000171124|ENST00000303225|FUT3;nc|ENSG00000156413|P51993-2|FUT6	93.5975768576971	0.05472259948179787	6				NaN	NaN	0	NaN	8450	3415	11860
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11885	31.711	NaN	55368	30	0	9680.5	0.214	+			26102	LSNNCDTGEK	10	96	569.2462366236716	1136.4779203141431	2	569.2481689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_LSNNC(Carbamidomethyl (C))DTGEK_	ENSG00000116698|ENST00000688051|SMG7;nc|ENSG00000116698|Q92540-2|SMG7;nc|ENSG00000116698|Q92540-4|SMG7;nc|ENSG00000116698|Q92540-5|SMG7;nc|ENSG00000116698|Q92540|SMG7;SMG7|p.M849*|1|0.31|ENSG00000116698|chr1:183546132-183546132|A/-|frameshift_variant;SMG7|p.N532H|1|0.04|ENSG00000116698|chr1:183542254-183542254|A/C|missense_variant	107.00750918261382	0.05688644658934505	6				NaN	NaN	0	NaN	8465	3418	11884
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11886	31.715	NaN	40353	30	0	3757.2	0.106	+			30972	QEQSTRVKL	9	97	544.8070113644362	1087.5994697956723	2	544.8090209960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QEQSTRVKL_	ENSG00000026950|ENST00000289361|BTN3A1;ENST00000082468.11_1_6:26405791-26410201:+|nuORF;nc|ENSG00000026950|O00481-2|BTN3A1;nc|ENSG00000026950|O00481-3|BTN3A1;nc|ENSG00000026950|O00481-4|BTN3A1	84.81729255234993	0.07947707105691067	6				NaN	NaN	0	NaN	8466	3418	11884
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11887	31.717	NaN	46090	30	0	4878.7	0.106				-1	 	0	103	578.8021399285682	1155.5897269239363	2	578.8037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8467	3418	11884
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11888	31.719	NaN	13307	30	0	1031.6	0.106			+	-1	QYVSCFPSHP	10	79	611.2712580068126	1220.527963080425	2	611.2730712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_QYVSC(Carbamidomethyl (C))FPSHP_	REV__chr1:152984125-152985198|126|31.17|0.0|21.57|+|0|SPRR1A,SPRR1A|1;REV__chr1:152984125-152985212|122|36.73|0.0|21.81|+|0|SPRR1A,SPRR1A|1	58.78195531508484	0.37691818691852547	6				NaN	NaN	0	NaN	8468	3418	11884
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11889	31.72	NaN	22337	30	0	1970.3	0.106			+	23861	LDEKEEATL	9	97	524.2615814519461	1046.508609970692	2	524.2684326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LDEKEEATL_	REV__ENSG00000185946|ENST00000423855|RNPC3;REV__ENST00000605810.1_1_3:70175532-70175664:-|nuORF;REV__nc|ENSG00000185946|Q96LT9-2|RNPC3	70.8162118820467	0.13725933411854815	6				NaN	NaN	0	NaN	8469	3418	11884
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11890	31.722	NaN	9387.8	30	0	3942	0.033				-1	 	0	53	449.2419278502384	896.4693027672769	2	449.242919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8470	3418	11884
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11891	31.723	NaN	12108	30	0	1026.1	0.141			+	31551	QLLSWKTEL	9	86	559.3171163351112	NaN	0	559.3184204101562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QLLSWKTEL_	REV__CON__H-INV:HIT000292931;REV__CON__P05787;REV__CON__Q9H552;REV__ENSG00000170421|ENST00000692008|KRT8;REV__ENST00000409686.2_1_9:102067468-102068890:+|nuORF;REV__ENST00000441609.1_1_6:162989483-162989972:+|nuORF;REV__ENST00000472924.1_1_3:160285772-160286174:+|nuORF;REV__ENST00000473150.1_1_3:87372750-87373125:+|nuORF;REV__ENST00000515599.1_1_5:146086275-146086944:-|nuORF;REV__ENST00000550170.5_1_12:53294858-53298765:-|nuORF;REV__nc|ENSG00000170421|P05787-2|KRT8	68.78682469695295	0.1118430353446351	6				NaN	NaN	0	NaN	8471	3418	11884
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11909	31.761	NaN	62019	30	0	48974	0.214				-1	 	0	81	485.27049301807557	968.5264331029512	2	485.2716979980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8486	3421	11908
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11910	31.765	NaN	31480	30	0	2835.1	0.106			+	44520	TSVEKHLKD	9	102	528.7884104806861	1055.5622680281722	2	528.7902221679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TSVEKHLKD_	REV__ENSG00000061656|ENST00000374273|SPAG4;REV__ENST00000463973.5_1_20:34206447-34206702:+|nuORF;REV__SPAG4|p.P393Qfs*7|3|0.3|ENSG00000061656|chr20:35620881-35620881|C/-|frameshift_variant	90.77665401227738	0.06267569666681755	6				NaN	NaN	0	NaN	8487	3421	11908
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11911	31.767	NaN	26787	30	0	3189	0.106	+			1332	AETILKNNI	9	98	508.2908981107838	1014.5672432883676	2	508.2927551269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AETILKNNI_	ENSG00000124214|ENST00000371856|STAU1;nc|ENSG00000124214|O95793-2|STAU1;nc|ENSG00000124214|O95793-3|STAU1	80.45461616416974	0.09558281504443908	6				NaN	NaN	0	NaN	8488	3421	11908
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11912	31.769	NaN	17591	30	0	1854.5	0.106			+	21745	KQNEKEKK	8	100	516.2964751843492	1030.5783974354983	2	516.2981567382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KQNEKEKK_	REV__ROCK1|p.R1035Q|1|0.21|ENSG00000067900|chr18:20967840-20967840|C/T|missense_variant	76.7741389293348	0.3504530765139327	6				NaN	NaN	0	NaN	8489	3421	11908
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11913	31.771	NaN	22004	30	0	11588	0.106			+	-1	MERKEQTKL	9	76	393.5450264367614	1177.6132499104842	3	393.5462646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_M(Oxidation (M))ERKEQTKL_	REV__ENSG00000153162|ENST00000283147|BMP6	56.43379154798735	0.2433427591689151	6				NaN	NaN	0	NaN	8490	3421	11908
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11914	31.773	NaN	7910.4	30	0	635.32	0.035	+			1396	AEVQKLQAL	9	75	500.29372375445104	998.5728945757021	2	500.2952575683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEVQKLQAL_	ENSG00000126777|ENST00000395314|KTN1;KTN1|p.A1102Gfs*15|2|0.3|ENSG00000126777|chr14:55670756-55670757|-/A|frameshift_variant;KTN1|p.H994Sfs*2|1|0.35|ENSG00000126777|chr14:55659677-55659678|-/C|frameshift_variant;KTN1|p.K1078Nfs*12|1|0.3|ENSG00000126777|chr14:55667292-55667292|A/-|frameshift_variant;KTN1|p.K1101Rfs*18|1|0.4|ENSG00000126777|chr14:55670757-55670757|A/-|frameshift_variant;KTN1|p.P993Lfs*6|1|0.36|ENSG00000126777|chr14:55659678-55659678|C/-|frameshift_variant;nc|ENSG00000126777|Q86UP2-2|KTN1;nc|ENSG00000126777|Q86UP2-3|KTN1;nc|ENSG00000126777|Q86UP2-4|KTN1	82.7504851949679	0.08565546331141553	6				NaN	NaN	0	NaN	8491	3421	11908
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11915	31.773	NaN	33856	30	0	4219.8	0.138				-1	 	0	68	432.6967899873919	863.3790270415839	2	432.6978759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8492	3421	11908
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11932	31.811	NaN	40031	30	0	6592.8	0.214	+			18601	ISRNGSTLGLK	11	78	573.3359093371399	1144.6572657410798	2	573.3383178710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ISRNGSTLGLK_	ENSG00000055483|ENST00000449938|USP36;USP36|p.K688Nfs*35|1|0.21|ENSG00000055483|chr17:78806980-78806980|T/-|frameshift_variant	65.46538089061403	0.2746690761028526	6				NaN	NaN	0	NaN	8506	3424	11931
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11933	31.815	NaN	41383	30	0	5517.4	0.106	+			1223	AEQKVEYTL	9	92	540.7802162546731	1079.545879576146	2	540.782958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEQKVEYTL_	ENSG00000114867|ENST00000346169|EIF4G1;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;ENST00000460829.5_1_3:184046782-184052693:+|nuORF;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1	123.20810148215591	0.019257656778428764	6				NaN	NaN	0	NaN	8507	3424	11931
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11934	31.817	NaN	43320	30	0	3106.5	0.106			+	23862	LDEKEEATL	9	96	524.2615814519461	1046.508609970692	2	524.2608642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LDEKEEATL_	REV__ENSG00000185946|ENST00000423855|RNPC3;REV__ENST00000605810.1_1_3:70175532-70175664:-|nuORF;REV__nc|ENSG00000185946|Q96LT9-2|RNPC3	70.8162118820467	0.13725933411854815	6				NaN	NaN	0	NaN	8508	3424	11931
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11935	31.819	NaN	21487	30	0	2646.6	0.106	+			11589	FPRAFMSM	8	89	493.7326266689253	985.4507004046507	2	493.734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FPRAFMSM_	ENSG00000102452|ENST00000251127|NALCN;ENST00000470333.1_1_13:101833448-102051507:-|nuORF;ENST00000497170.5_1_13:101795259-101997694:-|nuORF;NALCN|p.F1212Lfs*26|2|0.08|ENSG00000102452|chr13:101083146-101083146|A/-|frameshift_variant;NALCN|p.K626Nfs*19|1|0.45|ENSG00000102452|chr13:101144858-101144858|C/-|frameshift_variant;NALCN|p.K812Rfs*6|1|0.11|ENSG00000102452|chr13:101107719-101107719|T/-|frameshift_variant;NALCN|p.V852Wfs*19|1|0.07|ENSG00000102452|chr13:101107512-101107512|C/-|frameshift_variant;nc|ENSG00000102452|Q8IZF0-2|NALCN	57.81127852772723	0.5234495074909924	6				NaN	NaN	0	NaN	8509	3424	11931
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11936	31.82	NaN	22224	30	0	3187.7	0.106	+			791	AEFKHLTL	8	89	479.7712488922877	NaN	0	479.77154541015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEFKHLTL_	ENSG00000168610|ENST00000264657|STAT3;nc|ENSG00000168610|P40763-2|STAT3;nc|ENSG00000168610|P40763-3|STAT3;STAT3|p.R729Afs*3|2|0.33|ENSG00000168610|chr17:42316861-42316861|G/-|frameshift_variant	66.42927471994793	1.7418937515398478	6				NaN	NaN	0	NaN	8510	3424	11931
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11937	31.822	NaN	9354.4	30	0	546.56	0.036				-1	CVLKLCIMQ	9	81	533.7774504922223	1065.5403480512446	2	533.2742919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_CVLKLCIM(Oxidation (M))Q_	ENST00000519238.1_1_5:133477768-133481991:+|nuORF	47.91560031466742	0.327412564698279	6				NaN	NaN	0	NaN	8511	3424	11931
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11938	31.823	NaN	8311.5	30	0	5426.6	0.138			+	46771	VGVGALAG	8	54	322.19366881479925	NaN	0	322.1937561035156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VGVGALAG_	REV__ENSG00000259207|ENST00000559488|ITGB3;REV__ITGB3|p.G649Efs*20|1|0.3|ENSG00000259207|chr17:47300507-47300507|G/-|frameshift_variant;REV__ITGB3|p.R515Gfs*154|1|0.36|ENSG00000259207|chr17:47292417-47292417|C/-|frameshift_variant;REV__nc|ENSG00000259207|P05106-2|ITGB3;REV__nc|ENSG00000259207|P05106-3|ITGB3	16.704963439144045	1.7418937515398478	6				NaN	NaN	0	NaN	8512	3424	11931
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11956	31.862	NaN	53226	30	0	13048	0.214			+	7523	DGREQLDTY	9	99	548.7493270798648	1095.4841012265294	2	548.7511596679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DGREQLDTY_	REV__ENSG00000152595|ENST00000361056|MEPE;REV__nc|ENSG00000152595|Q9NQ76-2|MEPE;REV__nc|ENSG00000152595|Q9NQ76-3|MEPE	98.62937762414208	0.04060045538121712	6				NaN	NaN	0	NaN	8527	3427	11955
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11957	31.866	NaN	30181	30	0	3571.9	0.106	+			36011	SEIDTNQNSL	10	95	560.7592971441055	1119.504041355011	2	560.7598266601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEIDTNQNSL_	DAB2|p.F398Lfs*15|1|0.36|ENSG00000153071|chr5:39382765-39382765|A/-|frameshift_variant;ENSG00000153071|ENST00000320816|DAB2;nc|ENSG00000153071|P98082-3|DAB2	122.93914200107957	0.02317863035582428	6				NaN	NaN	0	NaN	8528	3427	11955
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11958	31.868	NaN	30886	30	0	8087.5	0.106			+	34703	RVTSDIKK	8	86	473.7881971380813	945.5618413429626	2	473.78936767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RVTSDIKK_	REV__ENSG00000133640|ENST00000393217|LRRIQ1;REV__nc|ENSG00000133640|Q96JM4-2|LRRIQ1	44.116797842482775	0.6307669463330267	6				NaN	NaN	0	NaN	8529	3427	11955
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11959	31.87	NaN	16709	30	0	1615.1	0.106	+			13901	GRIAAEHCIP	10	88	533.7774504922223	1065.5403480512446	2	533.7797241210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GRIAAEHCIP_	ENSG00000132953|ENST00000255305|XPO4;XPO4|p.C1022Afs*8|1|0.21|ENSG00000132953|chr13:20787582-20787582|A/-|frameshift_variant	42.396135135203025	0.5270658956260207	6				NaN	NaN	0	NaN	8530	3427	11955
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11960	31.872	NaN	14319	30	0	1659.7	0.106	+			11390	FLNAYQGL	8	86	463.2426435547576	924.4707341763152	2	463.2438659667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FLNAYQGL_	ENSG00000148835|ENST00000369839|TAF5;nc|ENSG00000148835|Q15542-2|TAF5	57.81127852772723	0.5234495074909924	6				NaN	NaN	0	NaN	8531	3427	11955
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11961	31.873	NaN	10933	30	0	1437.5	0.034			+	9774	ENPGSIANL	9	71	457.73145873135144	913.4483645295029	2	457.7320861816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ENPGSIANL_	REV__ENSG00000183431|ENST00000373019|SF3A3	79.71258880314673	0.09879134589249085	6				NaN	NaN	0	NaN	8532	3427	11955
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11962	31.874	NaN	16064	30	0	2034	0.139	+			6514	AYAPPPHVI	9	87	482.7648831314063	963.5152133296126	2	482.7656555175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AYAPPPHVI_	ENSG00000128335|ENST00000358502|APOL2	85.90917672979207	0.07639869513036507	6				NaN	NaN	0	NaN	8533	3427	11955
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11980	31.912	NaN	47037	30	0	18422	0.214				-1	 	0	91	350.2057235454021	698.3968941576043	2	350.20672607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8548	3430	11979
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11981	31.915	NaN	40861	30	0	5035.8	0.106			+	16573	HFTEGEGPV	9	96	486.7247513437014	971.4349497542029	2	486.7261657714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HFTEGEGPV_	REV__nc|ENSG00000154358|Q5VST9-3|OBSCN	55.50420428727701	0.2510918378945873	6				NaN	NaN	0	NaN	8549	3430	11979
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11982	31.917	NaN	18824	30	0	1085.9	0.106			+	32056	QRVQAGTLTL	10	95	543.8174204564211	1085.6202879796422	2	543.8193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QRVQAGTLTL_	REV__ENSG00000080603|ENST00000262518|SRCAP;REV__nc|ENSG00000080603|Q6ZRS2-2|SRCAP;REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP;REV__SRCAP|p.K2179Rfs*128|1|0.2|ENSG00000080603|chr16:30733930-30733930|A/-|frameshift_variant;REV__SRCAP|p.L2975*|1|0.31|ENSG00000080603|chr16:30738960-30738960|C/-|frameshift_variant;REV__SRCAP|p.P1878Hfs*89|2|0.36|ENSG00000080603|chr16:30725050-30725050|C/-|frameshift_variant;REV__SRCAP|p.P1879Tfs*21|1|0.46|ENSG00000080603|chr16:30725049-30725050|-/C|frameshift_variant;REV__SRCAP|p.R1871Gfs*96|1|0.19|ENSG00000080603|chr16:30725031-30725031|C/-|frameshift_variant;REV__SRCAP|p.R2548Efs*3|1|0.36|ENSG00000080603|chr16:30737668-30737669|-/C|frameshift_variant;REV__SRCAP|p.S1859Afs*108|1|0.25|ENSG00000080603|chr16:30724993-30724993|C/-|frameshift_variant	55.08391021199286	0.41055145962533396	6				NaN	NaN	0	NaN	8550	3430	11979
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11983	31.919	NaN	32360	30	0	3039.1	0.106	+			26637	LVCLYHVL	8	95	480.2724881287708	958.5304233243417	2	480.273681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LVCLYHVL_	ENSG00000205730|ENST00000381440|ITPRIPL2;ITPRIPL2|p.G223Afs*56|1|0.45|ENSG00000205730|chr16:19115124-19115124|G/-|frameshift_variant	43.626045697637714	0.6338121648150432	6				NaN	NaN	0	NaN	8551	3430	11979
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11984	31.921	NaN	15992	30	0	1484.2	0.106			+	33401	RIDYGKQKTD	10	76	612.3231824036307	1222.6318118740612	2	612.32470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RIDYGKQKTD_	REV__ENSG00000183091|ENST00000397345|NEB;REV__ENSG00000183091|ENST00000397345|NEB;REV__nc|ENSG00000183091|P20929-3|NEB;REV__nc|ENSG00000183091|P20929-3|NEB;REV__NEB|p.L4198Cfs*51|1|0.35|ENSG00000183091|chr2:151568357-151568357|G/-|frameshift_variant;REV__NEB|p.L4198Cfs*51|1|0.35|ENSG00000183091|chr2:151568357-151568357|G/-|frameshift_variant	81.52500206392136	0.18316182710238588	6				NaN	NaN	0	NaN	8552	3430	11979
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11985	31.923	NaN	10187	30	0	1365.7	0.106			+	6920	CMKNVLCHQ	9	78	538.2457059779542	1074.4768590227084	2	538.2478637695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_CMKNVLCHQ_	REV__ENSG00000180611|ENST00000392452|MB21D2	52.936696900407355	0.27249468807391813	6				NaN	NaN	0	NaN	8553	3430	11979
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	11986	31.925	NaN	63091	30	0	10060	0.035	+			9943	ERAGQTSVSL	10	110	524.2754184047692	1046.5362838763383	2	524.2788696289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ERAGQTSVSL_	ENSG00000070886|ENST00000166244|EPHA8	61.691277971877994	0.35045824941635534	6				NaN	NaN	0	NaN	8554	3430	11979
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12004	31.963	NaN	59166	30	0	8522.2	0.194			+	50589	YDGHRCCCIVT	11	86	692.2836791535755	1382.5528053739508	2	692.2853393554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_YDGHRC(Carbamidomethyl (C))C(Carbamidomethyl (C))CIVT_	REV__nc|ENSG00000204428|Q5SRR4-3|LY6G5C	47.95952297671804	0.44903247279694136	6				NaN	NaN	0	NaN	8569	3433	12003
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12005	31.967	NaN	46819	30	0	8056.5	0.106	+			42819	TEARFGAQL	9	95	496.7598392579204	991.5051255826409	2	496.7614440917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEARFGAQL_	CON__P08727;ENSG00000171345|ENST00000361566|KRT19	88.17693792209575	0.07000514020414955	6				NaN	NaN	0	NaN	8570	3433	12003
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12006	31.969	NaN	16060	30	0	3529.6	0.106	+			42751	TDMRCRTTF	9	85	594.2681342242829	1186.5217155153657	2	594.2701416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_TDMRC(Carbamidomethyl (C))RTTF_	ENSG00000130227|ENST00000252512|XPO7	66.42927471994793	0.16001998865088202	6				NaN	NaN	0	NaN	8571	3433	12003
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12007	31.97	NaN	18222	30	0	2231.1	0.106	+			11787	FSPCFAGCTY	10	77	548.2168393889539	1094.4191258447077	2	548.2189331054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FSPCFAGCTY_	ENSG00000205359|ENST00000506729|SLCO6A1;nc|ENSG00000205359|Q86UG4-2|SLCO6A1;nc|ENSG00000205359|Q86UG4-3|SLCO6A1	44.116797842482775	0.5112108506279902	6				NaN	NaN	0	NaN	8572	3433	12003
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12008	31.972	NaN	22243	30	0	13747	0.106				-1	 	0	79	462.285530822933	922.5565087126661	2	462.2869873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8573	3433	12003
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12009	31.974	NaN	22742	30	0	3898.9	0.036	+			38072	SPSRTIIQY	9	89	532.7887995067674	1063.5630460803347	2	532.7907104492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SPSRTIIQY_	ENSG00000177000|ENST00000376590|MTHFR;nc|ENSG00000177000|P42898-2|MTHFR	56.43379154798735	0.2433427591689151	6				NaN	NaN	0	NaN	8574	3433	12003
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12027	32.01	NaN	36271	30	0	7747.4	0.214	+			8217	EAEGNKWRL	9	90	551.7857204493245	1101.5568879654488	2	551.7879028320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EAEGNKWRL_	ENST00000253251.12_1_1:10093392-10093464:+|nuORF	87.75429964447693	0.0711966946989736	6				NaN	NaN	0	NaN	8589	3436	12026
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12028	32.014	NaN	33915	30	0	7198.5	0.106	+			1323	AETEPIVKM	9	101	509.26584655483293	1016.5171401764659	2	509.2681579589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AETEPIVKM_	ENSG00000104408|ENST00000220849|EIF3E;ENST00000518442.5_1_8:109247181-109261015:-|nuORF	110.11987700582712	0.028875675806141952	6				NaN	NaN	0	NaN	8590	3436	12026
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12029	32.016	NaN	36402	30	0	2737.5	0.106				-1	SKMEGKGDVM	10	97	557.2500393420002	1112.4855257508002	2	557.2521362304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Oxidation (M)	_SKM(Oxidation (M))EGKGDVM(Oxidation (M))_	ENSG00000183049|ENST00000619168|CAMK1D;nc|ENSG00000183049|Q8IU85-2|CAMK1D	51.52775601994872	0.4429225830406686	6				NaN	NaN	0	NaN	8591	3436	12026
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12030	32.018	NaN	20110	30	0	4051.9	0.106	+			33262	RGGCPCPRLF	10	83	581.7843386396723	1161.5541243461446	2	581.7859497070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_RGGC(Carbamidomethyl (C))PCPRLF_	ENST00000529833.5_3_8:144766707-144771377:+|nuORF	51.33545320467046	0.4446945571623749	6				NaN	NaN	0	NaN	8592	3436	12026
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12031	32.019	NaN	6055.6	30	0	641.87	0.106				-1	 	0	71	385.23089828286635	768.4472436325327	2	385.23211669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8593	3436	12026
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12032	32.021	NaN	8495.9	30	0	909.37	0.035				-1	 	0	78	504.78823795618416	1007.5619229791683	2	504.7899475097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8594	3436	12026
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12033	32.022	NaN	11523	30	0	1188.7	0.141			+	26990	LYNAHETKI	9	82	544.7885300431649	1087.5625071531297	2	544.7905883789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LYNAHETKI_	REV__ASXL3|p.P2037Hfs*43|1|0.33|ENSG00000141431|chr18:33745951-33745951|C/-|frameshift_variant;REV__ENSG00000141431|ENST00000269197|ASXL3	87.69643885390035	0.07135982304947239	6				NaN	NaN	0	NaN	8595	3436	12026
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12051	32.061	NaN	115430	30	0	16413	0.214			+	11323	FLALALGR	8	101	430.7715046005232	859.5284562678464	2	430.7726745605469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FLALALGR_	REV__ENSG00000073111|ENST00000265056|MCM2;REV__ENST00000474964.5_1_3:127323572-127340613:+|nuORF;REV__ENST00000477668.5_1_3:127323572-127337961:+|nuORF	65.89745868150666	0.44339748671293633	6				NaN	NaN	0	NaN	8610	3439	12050
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12052	32.065	NaN	90263	30	0	60298	0.106	+			15481	GVAFLLQLR	9	77	339.5464387499749	1015.6174868501248	3	339.54754638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GVAFLLQLR_	ENST00000515662.6_1_3:9404841-9404982:+|nuORF	25.450171626174864	0.5654022654467333	6				NaN	NaN	0	NaN	8611	3439	12050
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12053	32.067	NaN	45309	30	0	5649.3	0.106			+	-1	FLLLKQGR	8	100	508.8158841074332	1015.6172152816664	2	508.8177490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))FLLLKQGR_	REV__ENST00000409764.5_2_7:25164441-25164874:-|nuORF	71.37791200682192	0.3954169775488141	6				NaN	NaN	0	NaN	8612	3439	12050
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12054	32.069	NaN	9951.9	30	0	4957.1	0.106	+			32410	QVFKLGLAK	9	70	335.2139898789457	1002.6201402370372	3	335.21478271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QVFKLGLAK_	ENSG00000170889|ENST00000302907|RPS9;ENST00000498085.1_1_19:50222822-50223059:-|nuORF	39.252832667884924	0.4290233611298554	6				NaN	NaN	0	NaN	8613	3439	12050
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12055	32.071	NaN	12580	30	0	1177.6	0.106			+	39114	SSTERDRSL	9	81	546.7683577457829	1091.5221625583656	2	546.7699584960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SSTERDRSL_	REV__ENSG00000088727|ENST00000684063|KIF9;REV__ENST00000487440.5_1_3:47281337-47324087:-|nuORF;REV__KIF9|p.D543Y|1|0.16|ENSG00000088727|chr3:47243133-47243133|C/A|missense_variant	84.9155231211612	0.07920012719736333	6				NaN	NaN	0	NaN	8614	3439	12050
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12056	32.072	NaN	9008.7	30	0	907.04	0.033				-1	 	0	73	445.2155540419631	888.4165551507263	2	445.2169494628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8615	3439	12050
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12057	32.073	NaN	8601	30	0	631.44	0.142	+			24324	LFIDKTTGHF	10	82	589.8134431274476	1177.6123333216951	2	589.8154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LFIDKTTGHF_	ENSG00000107815|ENST00000311916|TWNK;nc|ENSG00000107815|Q96RR1-2|TWNK;nc|ENSG00000107815|Q96RR1-3|TWNK	58.22992032128504	0.38193887838457763	6				NaN	NaN	0	NaN	8616	3439	12050
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12075	32.112	NaN	28948	30	0	2921.3	0.214				-1	 	0	98	578.8021399285682	1155.5897269239363	2	578.8035888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8631	3442	12074
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12076	32.116	NaN	29349	30	0	5206.9	0.106	+			12977	GETKMVETAL	10	90	539.7746391666619	1077.5347254001238	2	539.7764282226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GETKMVETAL_	ENSG00000132465|ENST00000254801|JCHAIN	148.6902309647307	0.008728094565931875	6				NaN	NaN	0	NaN	8632	3442	12074
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12077	32.118	NaN	22676	30	0	3819	0.106				-1	 	0	81	631.3409210171668	1260.6672891011335	2	631.3429565429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8633	3442	12074
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12078	32.12	NaN	63735	30	0	3864.6	0.106			+	11688	FRGMEAKKM	9	108	557.2804211289431	1112.546289324686	2	557.282958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_FRGMEAKKM(Oxidation (M))_	REV__ENSG00000134294|ENST00000256689|SLC38A2;REV__ENST00000553252.1_1_12:46764947-46766316:-|nuORF;REV__SLC38A2|p.F332Cfs*28|1|0.09|ENSG00000134294|chr12:46363785-46363786|-/CAAAAACAAAAAC|frameshift_variant	113.41158876095287	0.025516849225023126	6				NaN	NaN	0	NaN	8634	3442	12074
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12079	32.122	NaN	9136.2	30	0	659.62	0.106				-1	 	0	77	501.74632556254335	1001.4780981918867	2	501.7478332519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8635	3442	12074
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12080	32.124	NaN	12360	30	0	1618	0.037			+	6811	CGRTVISCLK	10	86	568.7994244593854	1135.5842959855706	2	568.80126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_C(Carbamidomethyl (C))GRTVISCLK_	REV__nc|ENSG00000116991|Q9P2F8-2|SIPA1L2	77.31757898189308	0.2175361111083648	6				NaN	NaN	0	NaN	8636	3442	12074
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12081	32.124	NaN	20324	30	0	2952.3	0.14	+			26444	LTGPVMPVR	9	82	485.2793367639807	968.5441205947615	2	485.2812805175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LTGPVMPVR_	ENSG00000167526|ENST00000311528|RPL13;ENST00000399461.8_1_16:89627605-89629447:+|nuORF;ENST00000484610.5_1_16:89627907-89629447:+|nuORF;ENST00000570149.1_1_16:89628679-89629447:+|nuORF;nc|ENSG00000167526|P26373-2|RPL13	118.74307786436346	0.02196067127630568	6				NaN	NaN	0	NaN	8637	3442	12074
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12099	32.164	NaN	140130	30	0	11307	0.174				-1	 	0	110	490.78174041057645	979.5489278879529	2	490.7830810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8652	3445	12098
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12100	32.166	NaN	32545	30	0	5878.4	0.106				-1	 	0	85	455.2540542791156	908.4935556250313	2	455.2553405761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8653	3445	12098
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12101	32.169	NaN	28348	30	0	7919	0.106	+			31353	QKAEGGGRLQ	10	92	522.2810339215672	1042.5475149099343	2	522.783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QKAEGGGRLQ_	ENSG00000113645|ENST00000265293|WWC1;nc|ENSG00000113645|Q8IX03-2|WWC1	72.87924865735499	0.25379688738724415	6				NaN	NaN	0	NaN	8654	3445	12098
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12102	32.17	NaN	10109	30	0	681.32	0.106				-1	FYIHMLSL	8	84	520.2672524530325	1038.5199519728649	2	520.26904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_FYIHM(Oxidation (M))LSL_	ENSG00000280021|ENST00000624103|OR51F1;OR51F1|p.F259L|1|0.26|ENSG00000280021|chr11:4769162-4769162|G/T|missense_variant	37.028477286268924	0.6747514403204248	6				NaN	NaN	0	NaN	8655	3445	12098
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12103	32.172	NaN	13438	30	0	4581.8	0.106	+			30991	QERQETQSSIV	11	87	652.8257981169603	1303.6370433007205	2	652.8273315429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QERQETQSSIV_	ENSG00000119121|ENST00000360774|TRPM6;nc|ENSG00000119121|Q9BX84-2|TRPM6;nc|ENSG00000119121|Q9BX84-3|TRPM6;nc|ENSG00000119121|Q9BX84-4|TRPM6;TRPM6|p.E1956Kfs*25|1|0.33|ENSG00000119121|chr9:74728308-74728308|C/-|frameshift_variant	36.446750945000026	0.6065623449959539	6				NaN	NaN	0	NaN	8656	3445	12098
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12104	32.174	NaN	9805.4	30	0	1784.8	0.106			+	3196	ASKKIEGKF	9	71	336.5344378546052	NaN	0	336.5340881347656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASKKIEGKF_	REV__tr|U7SUA5|U7SUA5_FUSNUOligopeptidaseFOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01160PE=3SV=1	30.503639358989545	0.3235605894931338	6				NaN	NaN	0	NaN	8657	3445	12098
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12105	32.176	NaN	15895	30	0	3046.5	0.037	+			31638	QMPLLPVPLL	10	92	374.2315311402375	1119.6727640209126	3	374.2326965332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QMPLLPVPLL_	ENST00000472410.5_1_1:27684311-27685985:-|nuORF	22.579656572578934	0.6954366826851017	6				NaN	NaN	0	NaN	8658	3445	12098
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12123	32.213	NaN	129610	30	0	27026	0.163	+			5906	AVLDFVKQK	9	88	524.3122836549285	1046.6100143766569	2	524.3136596679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVLDFVKQK_	ENSG00000186001|ENST00000425562|LRCH3;nc|ENSG00000186001|Q96II8-2|LRCH3;nc|ENSG00000186001|Q96II8-3|LRCH3;nc|ENSG00000186001|Q96II8-4|LRCH3	136.26810882979174	0.012230845423532208	6				NaN	NaN	0	NaN	8673	3448	12122
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12124	32.216	NaN	121360	30	0	56536	0.106			+	13457	GLIVYGKQLG	10	95	349.87807736934326	NaN	0	349.8780212402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GLIVYGKQLG_	REV__ENST00000562945.2_1_16:34428948-34429212:-|nuORF	47.91560031466742	0.31878035802558913	6				NaN	NaN	0	NaN	8674	3448	12122
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12125	32.218	NaN	56326	30	0	8552.5	0.106				-1	 	0	90	439.2594103637799	876.5042677943599	2	439.26043701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8675	3448	12122
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12126	32.22	NaN	11203	30	0	3253.2	0.106			+	8880	EESLGKHQVL	10	91	570.3066184905144	1138.5986840478288	2	570.3084716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EESLGKHQVL_	REV__ENSG00000122136|ENST00000371776|OBP2A;REV__nc|ENSG00000122136|Q9NY56-3|OBP2A	61.691277971877994	0.35045824941635534	6				NaN	NaN	0	NaN	8676	3448	12122
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12127	32.222	NaN	15616	30	0	4681.1	0.106				-1	MRVKPFKMS	9	75	380.54007691954234	1138.598401358827	3	380.5413513183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_M(Oxidation (M))RVKPFKMS_	nc|ENSG00000131023|O95835-2|LATS1	19.996771675451527	0.6112419832031292	6				NaN	NaN	0	NaN	8677	3448	12122
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12128	32.224	NaN	7548.9	30	0	782.82	0.106				-1	MQTRGAVI	8	67	446.23978722663657	890.4650215200732	2	446.2413635253906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_M(Oxidation (M))QTRGAVI_	ENST00000606367.1_1_6:31165433-31165721:-|nuORF	64.20726635412375	0.4601301477144759	6				NaN	NaN	0	NaN	8678	3448	12122
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12129	32.226	NaN	7898.2	30	0	1099.1	0.033			+	50013	WCAAPLAL	8	64	451.23368199754407	900.4528110618882	2	451.23468017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_WC(Carbamidomethyl (C))AAPLAL_	REV__ENST00000553700.5_2_14:31675151-31676803:-|nuORF	54.89457262308372	0.5523244765420926	6				NaN	NaN	0	NaN	8679	3448	12122
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12147	32.263	NaN	60493	30	0	20263	0.214	+			15151	GTSELLLAK	9	85	466.27544445075165	930.5363359683033	2	466.2764587402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTSELLLAK_	ASAP1|p.P792Lfs*20|1|0.1|ENSG00000153317|chr8:130112120-130112120|G/-|frameshift_variant;ASAP2|p.H548Qfs*57|1|0.14|ENSG00000151693|chr2:9374842-9374842|C/-|frameshift_variant;ASAP2|p.L787Afs*16|1|0.31|ENSG00000151693|chr2:9388513-9388514|-/C|frameshift_variant;ENSG00000151693|ENST00000281419|ASAP2;ENSG00000153317|ENST00000518721|ASAP1;nc|ENSG00000151693|O43150-2|ASAP2;nc|ENSG00000153317|Q9ULH1-2|ASAP1	127.46168284122857	0.016682644177004526	6				NaN	NaN	0	NaN	8694	3451	12146
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12148	32.267	NaN	25214	30	0	3803.6	0.106	+			42544	TARTQKTAY	9	88	520.2805325601332	1038.5465121870664	2	520.2823486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TARTQKTAY_	ENSG00000100353|ENST00000216190|EIF3D;nc|ENSG00000100353|O15371-3|EIF3D	51.33545320467046	0.2872990594074956	6				NaN	NaN	0	NaN	8695	3451	12146
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12149	32.269	NaN	7415.6	30	0	1315.6	0.106				-1	 	0	72	448.7441033461604	895.4736537591208	2	448.7453308105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8696	3451	12146
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12150	32.271	NaN	12596	30	0	8633	0.106	+			30173	PSGIPRVVP	9	70	461.2787942043956	920.5430354755912	2	461.2795104980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PSGIPRVVP_	ENST00000523752.5_1_8:22877945-22878461:-|nuORF	44.116797842482775	0.37197099687881774	6				NaN	NaN	0	NaN	8697	3451	12146
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12151	32.272	NaN	5873.9	30	0	962.48	0.106				-1	 	0	64	434.2489143640134	866.4832757948268	2	434.2500915527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8698	3451	12146
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12152	32.274	NaN	12797	30	0	2584.3	0.035			+	-1	GLCVRAVYS	9	83	512.7649574813142	1023.5153620294285	2	512.76708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_GLC(Carbamidomethyl (C))VRAVYS_	REV__ENSG00000198753|ENST00000361971|PLXNB3;REV__nc|ENSG00000198753|Q9ULL4-2|PLXNB3;REV__PLXNB3|p.G1176Afs*22|1|0.15|ENSG00000198753|chrX:153774191-153774191|G/-|frameshift_variant;REV__PLXNB3|p.L1091Cfs*36|1|0.53|ENSG00000198753|chrX:153773699-153773699|G/-|frameshift_variant;REV__PLXNB3|p.R538Afs*67|1|0.27|ENSG00000198753|chrX:153769918-153769918|C/-|frameshift_variant;REV__PLXNB3|p.V1655Cfs*7|1|0.56|ENSG00000198753|chrX:153777236-153777236|G/-|frameshift_variant	37.15910966729921	0.4535818937225704	6				NaN	NaN	0	NaN	8699	3451	12146
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12153	32.275	NaN	7183.4	30	0	531.25	0.141			+	-1	SSLMAGDKRT	10	79	541.2675740420559	1080.5205951509117	2	541.2694091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_SSLM(Oxidation (M))AGDKRT_	REV__ENST00000304677.2_1_14:21249438-21249935:+|nuORF	54.722347961057174	0.4138398245444204	6				NaN	NaN	0	NaN	8700	3451	12146
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12171	32.314	NaN	27653	30	0	6621.4	0.214			+	-1	PVHNQVTMPQ	10	95	389.52665689258004	1165.5581412779402	3	389.52813720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_PVHNQVTM(Oxidation (M))PQ_	REV__CDC37L1|p.A316Yfs*10|1|0.05|ENSG00000106993|chr9:4706041-4706042|-/CATACATATATATT|frameshift_variant;REV__ENSG00000106993|ENST00000381854|CDC37L1	31.634271133179894	0.6214930414500597	6				NaN	NaN	0	NaN	8715	3454	12170
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12172	32.318	NaN	15003	30	0	1389.4	0.106			+	26529	LTQPHHCL	8	83	503.2524381039025	1004.490323274605	2	503.25360107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LTQPHHC(Carbamidomethyl (C))L_	REV__ENST00000452765.6_1_4:2822364-2824713:+|nuORF	54.76467175910256	0.5536104764165384	6				NaN	NaN	0	NaN	8716	3454	12170
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12173	32.32	NaN	10269	30	0	1602	0.106				-1	 	0	75	513.2833512255036	1024.552149517807	2	513.2850952148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8717	3454	12170
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12174	32.322	NaN	21718	30	0	3007.1	0.106	+			9618	ELPFRPSACF	10	93	583.7865978274333	1165.5586427216665	2	583.78857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ELPFRPSACF_	ENST00000265077.7_1_5:82767309-82767426:+|nuORF	36.446750945000026	0.5818864909973037	6				NaN	NaN	0	NaN	8718	3454	12170
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12175	32.323	NaN	9219.6	30	0	5378	0.106			+	23700	LATLFIMI	8	62	461.2787942043956	920.5430354755912	2	461.2796630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LATLFIMI_	REV__ENSG00000140254|ENST00000560572|DUOXA1;REV__nc|ENSG00000140254|Q1HG43-2|DUOXA1;REV__nc|ENSG00000140254|Q1HG43-3|DUOXA1	44.53106598305862	0.628196326904373	6				NaN	NaN	0	NaN	8719	3454	12170
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12176	32.325	NaN	7913.6	30	0	1620.9	0.031			+	13216	GIGGGAGNF	9	65	375.18324207489974	748.3519312165995	2	375.1844482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GIGGGAGNF_	REV__ENSG00000179168|ENST00000334928|GGN;REV__GGN|p.A569Pfs*47|1|0.5|ENSG00000179168|chr19:38385557-38385557|C/-|frameshift_variant;REV__nc|ENSG00000179168|Q86UU5-2|GGN	35.200714571348534	0.47427825964483533	6				NaN	NaN	0	NaN	8720	3454	12170
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12177	32.326	NaN	7885.3	30	0	3984.3	0.144			+	-1	FRYALMMKK	9	69	407.2154759472546	1218.6245984419638	3	407.21661376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Oxidation (M)	_FRYALM(Oxidation (M))M(Oxidation (M))KK_	REV__ENST00000551714.1_1_12:74565496-74565607:+|nuORF	24.519189625965996	0.574102787014149	6				NaN	NaN	0	NaN	8721	3454	12170
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12195	32.365	NaN	25808	30	0	4724.2	0.214			+	46075	VCRLCLAR	8	89	495.7704975338368	989.5264421344737	2	495.771728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_VC(Carbamidomethyl (C))RLCLAR_	REV__ENST00000373812.7_2_1:29063436-29063616:+|nuORF	55.50420428727701	0.5462892107279674	6				NaN	NaN	0	NaN	8736	3457	12194
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12196	32.368	NaN	30747	30	0	3530.3	0.106	+			20192	KELAFFANAL	10	85	562.310785624754	1122.6070183163079	2	562.3128662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KELAFFANAL_	ENSG00000138413|ENST00000345146|IDH1;ENST00000484575.1_1_2:209101805-209104899:-|nuORF	55.08391021199286	0.41055145962533396	6				NaN	NaN	0	NaN	8737	3457	12194
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12197	32.37	NaN	11365	30	0	1137.5	0.106			+	17939	IGMLGRGAAL	10	79	479.7801362411934	957.5457195491869	2	479.7817687988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IGMLGRGAAL_	REV__ENSG00000146232|ENST00000619360|NFKBIE;REV__nc|ENSG00000146232|O00221|NFKBIE	85.35947970620816	0.1576417970686418	6				NaN	NaN	0	NaN	8738	3457	12194
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12198	32.372	NaN	14364	30	0	2136.4	0.106			+	-1	MICPTYIQI	9	83	549.2727166659726	1096.530880398745	2	549.2741088867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_M(Oxidation (M))ICPTYIQI_	REV__ENSG00000145863|ENST00000274545|GABRA6	73.97473282117947	0.12360187025703594	6				NaN	NaN	0	NaN	8739	3457	12194
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12199	32.374	NaN	16187	30	0	836.83	0.106				-1	LRAVCLCGI	9	88	502.7732962419721	1003.5320395507442	2	502.77392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_LRAVC(Carbamidomethyl (C))LCGI_	ENST00000368190.7_1_1:157493863-157494031:-|nuORF	50.0245360154114	0.3026755932229825	6				NaN	NaN	0	NaN	8740	3457	12194
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12200	32.376	NaN	7399.4	30	0	1056.2	0.106				-1	 	0	70	440.7466110866399	879.4786692400799	2	440.74774169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8741	3457	12194
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12201	32.378	NaN	5073.3	30	0	494.1	0.037			+	31745	QPAQYGYSDF	10	72	588.2537036632075	1174.4928543932149	2	588.2554931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QPAQYGYSDF_	REV__ENSG00000084628|ENST00000373736|NKAIN1;REV__nc|ENSG00000084628|Q4KMZ8-3|NKAIN1	45.97224482568171	0.49411383603842696	6				NaN	NaN	0	NaN	8742	3457	12194
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12220	32.414	NaN	32110	30	0	9025.9	0.214	+			42533	TARERAKH	8	75	484.7728671925343	967.5311814518686	2	484.77386474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TARERAKH_	ENSG00000124486|ENST00000378308|USP9X;nc|ENSG00000124486|Q93008-3|USP9X;USP9X|p.K1773Nfs*9|1|0.28|ENSG00000124486|chrX:41214693-41214693|A/-|frameshift_variant;USP9X|p.K2377*|1|0.88|ENSG00000124486|chrX:41229318-41229319|-/T|frameshift_variant;USP9X|p.Y1953Mfs*7|1|0.72|ENSG00000124486|chrX:41216419-41216419|T/-|frameshift_variant	82.30502934623384	0.30436709589983096	6				NaN	NaN	0	NaN	8758	3460	12219
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12221	32.418	NaN	31749	30	0	6498.1	0.106			+	27213	MEICNKKSF	9	87	550.2677650250981	1098.5209771169962	2	550.2696533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MEICNKKSF_	REV__ENST00000477909.5_1_3:101500888-101500975:+|nuORF;REV__ENST00000495842.5_1_3:101498619-101500975:+|nuORF	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	8759	3460	12219
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12222	32.42	NaN	39112	30	0	12054	0.106	+			14194	GSSAINILK	9	83	451.76837169198774	901.5221904507755	2	451.7685241699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GSSAINILK_	ENSG00000167522|ENST00000301030|ANKRD11;ENST00000330736.9_1_16:89334888-89371640:-|nuORF	98.58198989935565	0.04066992115528678	6				NaN	NaN	0	NaN	8760	3460	12219
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12223	32.422	NaN	28344	30	0	5923.1	0.106	+			2436	APGGRPSPPNP	11	105	523.7741082337922	1045.5336635343842	2	524.775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_APGGRPSPPNP_	ENSG00000184058|ENST00000649276|TBX1;nc|ENSG00000184058|O43435-3|TBX1	27.047317107675042	0.7060868989289394	6				NaN	NaN	0	NaN	8761	3460	12219
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12224	32.424	NaN	27697	30	0	4754.7	0.106	+			23952	LDSDIRKPS	9	93	515.7783440483727	1029.5421351635453	2	515.7798461914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LDSDIRKPS_	ENST00000494739.1_1_3:166579734-166579821:+|nuORF	58.22992032128504	0.22837015374068087	6				NaN	NaN	0	NaN	8762	3460	12219
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12225	32.425	NaN	14908	30	0	1315.4	0.037			+	-1	LSGERMSCLK	10	80	590.7938590947396	1179.573165256279	2	590.7958374023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_LSGERMSC(Carbamidomethyl (C))LK_	REV__NTNG2|p.N294K|1|0.26|ENSG00000196358|chr9:132226873-132226873|C/A|missense_variant	72.87924865735499	0.25379688738724415	6				NaN	NaN	0	NaN	8763	3460	12219
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12226	32.426	NaN	15365	30	0	2027.6	0.142			+	31107	QFRPRRGGL	9	85	543.8173362018172	1085.6201194704342	2	543.8195190429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QFRPRRGGL_	REV__ENST00000438872.1_1_3:48482089-48487686:-|nuORF	31.529811441608018	0.5085848003137583	6				NaN	NaN	0	NaN	8764	3460	12219
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12244	32.466	NaN	48120	30	0	9080.5	0.214			+	26844	LVVKSFNFK	9	91	541.323832248558	1080.633111563916	2	541.3258056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LVVKSFNFK_	REV__ENSG00000268041|ENST00000597630|ERFL	63.53385203322761	0.18415635464017938	6				NaN	NaN	0	NaN	8779	3463	12243
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12245	32.469	NaN	18099	30	0	1091.1	0.106	+			10806	FALGQFSENL	10	91	563.282495895123	1124.550438857046	2	563.2845458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FALGQFSENL_	ENSG00000196497|ENST00000354464|IPO4;ENST00000558780.5_2_14:24651254-24657791:-|nuORF;ENST00000559588.5_1_14:24652221-24657802:-|nuORF;ENST00000561199.5_1_14:24652794-24657993:-|nuORF;nc|ENSG00000196497|Q8TEX9-2|IPO4	77.31757898189308	0.2175361111083648	6				NaN	NaN	0	NaN	8780	3463	12243
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12246	32.471	NaN	15124	30	0	1815.4	0.106			+	27214	MEICNKKSF	9	96	550.2677650250981	1098.5209771169962	2	550.26953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MEICNKKSF_	REV__ENST00000477909.5_1_3:101500888-101500975:+|nuORF;REV__ENST00000495842.5_1_3:101498619-101500975:+|nuORF	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	8781	3463	12243
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12247	32.473	NaN	22445	30	0	4916.4	0.106	+			15009	GTNALLVVK	9	82	457.786742618373	NaN	0	457.786865234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTNALLVVK_	ENSG00000006712|ENST00000221265|PAF1;nc|ENSG00000006712|Q8N7H5-2|PAF1;nc|ENSG00000006712|Q8N7H5-3|PAF1	101.25262130126117	0.018912469721856617	6				NaN	NaN	0	NaN	8782	3463	12243
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12248	32.475	NaN	19217	30	0	8919.9	0.106				-1	LVKIRCHR	8	83	361.2181759321007	1080.632698396502	3	361.2193908691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_LVKIRC(Carbamidomethyl (C))HR_	ENST00000421012.1_1_2:63821688-63824551:+|nuORF	47.91560031466742	0.6071945918984287	6				NaN	NaN	0	NaN	8783	3463	12243
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12249	32.477	NaN	17910	30	0	1763.6	0.035			+	43173	TETLPMLLL	9	95	515.7966883158997	1029.5788236985993	2	515.7984619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TETLPMLLL_	REV__ENST00000374882.7_1_6:32808812-32809388:-|nuORF	47.657333605630114	0.33044192980041115	6				NaN	NaN	0	NaN	8784	3463	12243
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12250	32.477	NaN	33689	30	0	5572.6	0.141	+			17749	IEQEQKLAL	9	83	536.3043614038442	1070.5941698744882	2	536.30615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IEQEQKLAL_	ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2	150.36159442982594	0.006784847064083231	6				NaN	NaN	0	NaN	8785	3463	12243
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12268	32.516	NaN	57670	30	0	10657	0.214				-1	 	0	91	470.7933232662002	939.5720935992005	2	470.7946472167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8800	3466	12267
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12269	32.519	NaN	27361	30	0	4648.6	0.106	+			34107	RSQSIVSSV	9	97	481.7673622474046	961.5201715616092	2	481.7686462402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RSQSIVSSV_	ENSG00000173166|ENST00000319170|RAPH1;nc|ENSG00000173166|Q70E73-2|RAPH1;nc|ENSG00000173166|Q70E73-3|RAPH1;nc|ENSG00000173166|Q70E73-4|RAPH1;nc|ENSG00000173166|Q70E73-5|RAPH1;nc|ENSG00000173166|Q70E73-6|RAPH1;nc|ENSG00000173166|Q70E73-7|RAPH1;nc|ENSG00000173166|Q70E73-8|RAPH1;nc|ENSG00000173166|Q70E73-9|RAPH1;RAPH1|p.K1026Qfs*47|1|0.27|ENSG00000173166|chr2:203440114-203440115|-/G|frameshift_variant	76.7741389293348	0.11149722112137898	6				NaN	NaN	0	NaN	8801	3466	12267
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12270	32.522	NaN	33174	30	0	8476	0.106				-1	 	0	70	331.8650986712292	992.5734666138876	3	331.8661193847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8802	3466	12267
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12271	32.523	NaN	12738	30	0	2639.9	0.106	+			18166	ILRGPGRR	8	75	462.7960155271748	923.5774781211496	2	462.7972106933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ILRGPGRR_	MYOCD|p.Q636Sfs*59|1|0.39|ENSG00000141052|chr17:12753188-12753189|-/C|frameshift_variant	50.0245360154114	0.5941082100236891	6				NaN	NaN	0	NaN	8803	3466	12267
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12272	32.525	NaN	22882	30	0	11135	0.106			+	37677	SLRTVHRDL	9	76	366.212441917169	1095.615496351707	3	366.2135925292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SLRTVHRDL_	REV__ENST00000215941.8_1_22:38227406-38227535:-|nuORF	26.69291269510374	0.5537881896960711	6				NaN	NaN	0	NaN	8804	3466	12267
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12273	32.527	NaN	15307	30	0	2873	0.035			+	25893	LSGEIWPEL	9	87	522.2743026082599	NaN	0	522.2743530273438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSGEIWPEL_	REV__ENST00000328916.7_1_12:7167858-7168176:+|nuORF	51.33545320467046	0.19748963086191895	6				NaN	NaN	0	NaN	8805	3466	12267
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12274	32.528	NaN	9971.3	30	0	2224.4	0.139			+	20226	KELPKFHG	8	73	478.2707499093029	954.5269468854058	2	478.2713928222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KELPKFHG_	REV__ENSG00000156374|ENST00000369847|PCGF6;REV__ENST00000595406.1_1_19:22321288-22321780:+|nuORF;REV__nc|ENSG00000156374|Q9BYE7-3|PCGF6	38.80614096846853	0.6637206697844082	6				NaN	NaN	0	NaN	8806	3466	12267
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12292	32.567	NaN	149150	30	0	81301	0.198	+			29705	PHEAKHYLS	9	93	361.1858296933168	1080.5356596801505	3	361.18695068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PHEAKHYLS_	ENSG00000112159|ENST00000369393|MDN1;MDN1|p.L4077Cfs*15|1|0.16|ENSG00000112159|chr6:89680625-89680625|G/-|frameshift_variant;MDN1|p.L5278Ffs*6|1|0.18|ENSG00000112159|chr6:89652273-89652274|-/A|frameshift_variant	35.61828744233558	0.47037581924408073	6				NaN	NaN	0	NaN	8821	3469	12291
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12293	32.57	NaN	37128	30	0	4203	0.106			+	49390	VVTEAIGQVT	10	103	508.7832327848238	1015.5519126364476	2	508.7848205566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VVTEAIGQVT_	REV__tr|U7STZ3|U7STZ3_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01040PE=4SV=1	63.53385203322761	0.33370026130094593	6				NaN	NaN	0	NaN	8822	3469	12291
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12294	32.573	NaN	41481	30	0	8072.1	0.106				-1	 	0	90	515.7726250328243	1029.5306971324485	2	515.7742309570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8823	3469	12291
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12295	32.574	NaN	18388	30	0	2956.4	0.106	+			5073	ATSKVALVY	9	85	476.27786670428327	950.5411804753666	2	476.2786560058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATSKVALVY_	ENSG00000110955|ENST00000262030|ATP5F1B	58.22992032128504	0.22837015374068087	6				NaN	NaN	0	NaN	8824	3469	12291
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12296	32.576	NaN	26368	30	0	2244.5	0.106	+			26847	LVVMFFYF	8	109	541.2752947242418	1080.5360365152835	2	541.27685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_LVVM(Oxidation (M))FFYF_	ENST00000370272.8_1_1:93826667-93826868:+|nuORF	67.3271909547111	0.42924334279516513	6				NaN	NaN	0	NaN	8825	3469	12291
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12297	32.578	NaN	15827	30	0	1448	0.106			+	23667	LASKCLTQIS	10	96	532.2945323429951	1062.5745117527902	2	532.2987670898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LASKCLTQIS_	REV__ENSG00000204104|ENST00000373327|TRAF3IP1;REV__nc|ENSG00000204104|Q8TDR0-2|TRAF3IP1	96.0336014099291	0.09653029772959643	6				NaN	NaN	0	NaN	8826	3469	12291
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12298	32.58	NaN	27094	30	0	4210.1	0.035			+	26081	LSMAQQGVGR	10	105	523.7741082337922	1045.5336635343842	2	523.777587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSMAQQGVGR_	REV__ENSG00000104848|ENST00000221444|KCNA7	72.87924865735499	0.25379688738724415	6				NaN	NaN	0	NaN	8827	3469	12291
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12316	32.617	NaN	148070	30	0	27265	0.186	+			12042	FYNDRASF	8	97	510.2327990215929	1018.4510451099858	2	510.23443603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FYNDRASF_	ENSG00000123104|ENST00000381340|ITPR2;ENSG00000150995|ENST00000649015|ITPR1;ITPR2|p.K1802Sfs*13|2|0.65|ENSG00000123104|chr12:26487217-26487217|T/-|frameshift_variant;ITPR2|p.N1390Mfs*17|1|0.07|ENSG00000123104|chr12:26596973-26596973|C/-|frameshift_variant;ITPR2|p.R1837Gfs*7|1|0.09|ENSG00000123104|chr12:26487113-26487113|T/-|frameshift_variant;ITPR2|p.R1837Kfs*4|1|0.24|ENSG00000123104|chr12:26487112-26487113|-/T|frameshift_variant;nc|ENSG00000150995|Q14643-2|ITPR1;nc|ENSG00000150995|Q14643-3|ITPR1;nc|ENSG00000150995|Q14643-4|ITPR1;nc|ENSG00000150995|Q14643-5|ITPR1;nc|ENSG00000150995|Q14643-6|ITPR1;nc|ENSG00000150995|Q14643-7|ITPR1;nc|ENSG00000150995|Q14643-8|ITPR1	55.50420428727701	0.5462892107279674	6				NaN	NaN	0	NaN	8842	3472	12315
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12317	32.62	NaN	42021	30	0	5099.2	0.106				-1	 	0	93	527.7496260071881	1053.4846990811761	2	527.75146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8843	3472	12315
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12318	32.622	NaN	26222	30	0	2146.7	0.106			+	27576	MPGVPGAWPC	10	95	507.7303096114483	1013.4460662896967	2	507.7317199707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MPGVPGAWPC_	REV__ENST00000600410.5_1_19:48257983-48259211:+|nuORF	44.53106598305862	0.5073935772121767	6				NaN	NaN	0	NaN	8844	3472	12315
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12319	32.624	NaN	80253	30	0	48057	0.106				-1	 	0	102	401.9187565184125	1202.7344401554376	3	401.92010498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8845	3472	12315
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12320	32.626	NaN	18998	30	0	1720.1	0.106			+	10204	ETFPITEL	8	76	475.2494084089089	948.4842638846178	2	475.2543640136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ETFPITEL_	REV__ENSG00000111261|ENST00000535902|MANSC1;REV__nc|ENSG00000111261|Q9H8J5-2|MANSC1	71.37791200682192	0.3954169775488141	6				NaN	NaN	0	NaN	8846	3472	12315
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12321	32.628	NaN	18782	30	0	2693.1	0.106	+			42980	TEKGNLEVL	9	94	501.7757717646171	1001.5369905960342	2	501.77691650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TEKGNLEVL_	ENSG00000115306|ENST00000356805|SPTBN1;ENSG00000173898|ENST00000533211|SPTBN2;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1;nc|ENSG00000173898|O15020-2|SPTBN2;SPTBN1|p.K503Rfs*24|1|0.06|ENSG00000115306|chr2:54626095-54626095|G/-|frameshift_variant;SPTBN2|p.P924Qfs*35|1|0.39|ENSG00000173898|chr11:66701629-66701629|G/-|frameshift_variant	88.17693792209575	0.07000514020414955	6				NaN	NaN	0	NaN	8847	3472	12315
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12322	32.63	NaN	39809	30	0	4896	0.038	+			21115	KKRKHISGHL	10	95	602.3748498061834	1202.7351466791667	2	602.3767700195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KKRKHISGHL_	ENST00000393791.7_1_12:57866252-57866303:-|nuORF	51.52775601994872	0.4429225830406686	6				NaN	NaN	0	NaN	8848	3472	12315
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12340	32.667	NaN	17907	30	0	3490.9	0.214				-1	 	0	80	437.2724885451309	872.5304241570618	2	437.2735290527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8863	3475	12339
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12341	32.671	NaN	14838	30	0	2079	0.106	+			190	AALDKATVL	9	72	451.27058359950854	NaN	0	451.27093505859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AALDKATVL_	ENSG00000150593|ENST00000280154|PDCD4;ENST00000489049.5_1_10:112647518-112650449:+|nuORF;nc|ENSG00000150593|Q53EL6-2|PDCD4	88.17693792209575	0.04527150213038833	6				NaN	NaN	0	NaN	8864	3475	12339
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12342	32.673	NaN	21979	30	0	11296	0.106	+			45963	VASSRRPGR	9	77	493.28577179960405	984.5569906660081	2	493.2872009277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VASSRRPGR_	ENST00000607047.1_1_8:38240229-38240670:+|nuORF	30.317721548370564	0.5199124245378496	6				NaN	NaN	0	NaN	8865	3475	12339
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12343	32.675	NaN	11482	30	0	700.34	0.106				-1	 	0	74	461.7516307368741	921.4887085405483	2	461.75286865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8866	3475	12339
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12344	32.677	NaN	11205	30	0	1129.8	0.106	+			30952	QENLSSNVN	9	74	502.736082352846	1003.457611772492	2	502.7375793457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QENLSSNVN_	tr|U7SYY2|U7SYY2_FUSNUHeat-inducibletranscriptionrepressorHrcAOS=FusobacteriumnucleatumCTI-5OX=1316586GN=hrcAPE=3SV=1	41.42661286455405	0.403525789677298	6				NaN	NaN	0	NaN	8867	3475	12339
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12345	32.678	NaN	12153	30	0	836.61	0.037	+			804	AEFTKSIAKF	10	84	571.3151447605799	1140.6157365879596	2	571.3163452148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEFTKSIAKF_	ENSG00000118363|ENST00000263672|SPCS2	133.7523857240709	0.012419833933541829	6				NaN	NaN	0	NaN	8868	3475	12339
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12346	32.679	NaN	7288.6	30	0	3034.2	0.14				-1	 	0	72	455.25422286787455	908.4938928025491	2	455.2552795410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8869	3475	12339
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12359	32.715	NaN	73363	30	0	7190.5	0.214			+	34540	RVIYKVWTQ	9	111	596.845076615301	1191.6756002974018	2	596.8472290039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVIYKVWTQ_	REV__ENSG00000115009|ENST00000358813|CCL20;REV__nc|ENSG00000115009|P78556-2|CCL20	61.691277971877994	0.19951612995419254	6				NaN	NaN	0	NaN	8879	3478	12358
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12360	32.719	NaN	74156	30	0	8296.4	0.106			+	12008	FVVRVNFVVGG	11	89	398.23245957206524	1191.6755493163957	3	398.2337951660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FVVRVNFVVGG_	REV__ENST00000540779.1_1_12:122359430-122370014:+|nuORF;REV__nc|ENSG00000158023|Q8TBY9-3|CFAP251	35.17822180527639	0.6208003396870814	6				NaN	NaN	0	NaN	8880	3478	12358
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12361	32.721	NaN	33259	30	0	6141.8	0.106	+			6999	CRIAAMDWI	9	90	539.7617007191003	1077.5088485050005	2	539.7637939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_CRIAAMDWI_	ENST00000264689.10_1_4:186329146-186329518:-|nuORF	70.8162118820467	0.13725933411854815	6				NaN	NaN	0	NaN	8881	3478	12358
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12362	32.723	NaN	25588	30	0	9616.5	0.106	+			46893	VIQALQDKLQ	10	96	385.89594181988656	1154.6659960598597	3	385.8971862792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VIQALQDKLQ_	ENSG00000146530|ENST00000275358|VWDE;nc|ENSG00000146530|Q8N2E2-3|VWDE	27.047317107675042	0.6589519614906109	6				NaN	NaN	0	NaN	8882	3478	12358
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12363	32.725	NaN	38217	30	0	8746.3	0.106	+			2383	ANPGRHRK	8	85	468.26752579879303	934.5204986643861	2	468.26873779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ANPGRHRK_	ENSG00000151503|ENST00000534548|NCAPD3;NCAPD3|p.A322Lfs*24|1|0.31|ENSG00000151503|chr11:134206654-134206654|G/-|frameshift_variant;NCAPD3|p.S1143Ffs*5|1|0.35|ENSG00000151503|chr11:134168141-134168142|-/A|frameshift_variant	38.80614096846853	0.6637206697844082	6				NaN	NaN	0	NaN	8883	3478	12358
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12364	32.727	NaN	14356	30	0	3459.3	0.036	+			19189	IYTNLNQKI	9	80	553.8131889051755	1105.6118248771509	2	553.814208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IYTNLNQKI_	ENSG00000144036|ENST00000272427|EXOC6B;nc|ENSG00000144036|Q9Y2D4-2|EXOC6B	185.54966270084765	0.0007389233275946833	6				NaN	NaN	0	NaN	8884	3478	12358
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12365	32.727	NaN	95916	30	0	9496.1	0.035			+	42659	TAVRVYRR	8	76	510.80639007390084	1019.5982272146017	2	510.808349609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TAVRVYRR_	REV__ENSG00000187961|ENST00000338591|KLHL17;REV__ENST00000466300.1_1_1:898262-899729:+|nuORF;REV__KLHL17|p.T471S|1|0.27|ENSG00000187961|chr1:963976-963976|C/G|missense_variant	29.14955571784316	0.7342621283720113	6				NaN	NaN	0	NaN	8885	3478	12358
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12383	32.764	NaN	16152	30	0	3830.9	0.213	+			17124	HSPEWYSKGF	10	81	619.2867175270017	1236.5588821208032	2	619.2888793945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HSPEWYSKGF_	ENSG00000133121|ENST00000336934|STARD13;nc|ENSG00000133121|Q9Y3M8-2|STARD13;nc|ENSG00000133121|Q9Y3M8-3|STARD13;nc|ENSG00000133121|Q9Y3M8-4|STARD13	56.72105179125745	0.3956618550748046	6				NaN	NaN	0	NaN	8900	3481	12382
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12384	32.768	NaN	16442	30	0	1832.3	0.106				-1	MPLALEVVN	9	83	501.27240964487964	1000.5302663565593	2	500.76898193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_M(Oxidation (M))PLALEVVN_	ENSG00000080200|ENST00000389622|CRYBG3	71.29570347882199	0.13518600952103718	6				NaN	NaN	0	NaN	8901	3481	12382
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12385	32.77	NaN	11792	30	0	2173.7	0.106	+			22246	KTALILGGDR	10	90	522.3153733522992	1042.6161937713982	2	522.3161010742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KTALILGGDR_	DDX54|p.G271Afs*41|1|0.25|ENSG00000123064|chr12:113175098-113175098|C/-|frameshift_variant;DDX54|p.G702Efs*14|1|0.58|ENSG00000123064|chr12:113163022-113163022|C/-|frameshift_variant;DDX54|p.R734Lfs*97|1|0.27|ENSG00000123064|chr12:113161992-113161992|C/-|frameshift_variant;ENSG00000123064|ENST00000306014|DDX54;nc|ENSG00000123064|Q8TDD1-2|DDX54	72.28901530423826	0.2586190430189177	6				NaN	NaN	0	NaN	8902	3481	12382
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12386	32.772	NaN	13193	30	0	2070	0.106	+			17632	IEKDGYNNN	9	92	533.7441834509118	1065.4738139686235	2	533.7459716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IEKDGYNNN_	ENSG00000123338|ENST00000293373|NCKAP1L;nc|ENSG00000123338|P55160-2|NCKAP1L	42.86426827375447	0.38666266728046506	6				NaN	NaN	0	NaN	8903	3481	12382
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12387	32.774	NaN	7537.8	30	0	1674.1	0.106			+	22610	KTTKQAAFL	9	64	336.5344378546052	NaN	0	336.53424072265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KTTKQAAFL_	REV__tr|U7SWV5|U7SWV5_FUSNUBD-FAE-likedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01186PE=4SV=1	27.882242232435846	0.3367954786602879	6				NaN	NaN	0	NaN	8904	3481	12382
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12388	32.776	NaN	19200	30	0	1141.6	0.036	+			31666	QNFLKSASLV	10	86	553.8131889051755	1105.6118248771509	2	554.8211669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QNFLKSASLV_	ENST00000609439.2_2_7:45847154-45848297:+|nuORF	49.44154591367651	0.46214596422418036	6				NaN	NaN	0	NaN	8905	3481	12382
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12389	32.776	NaN	7114.5	30	0	754.15	0.139			+	46675	VGGRGAKL	8	88	379.2382260435683	756.4618991539367	2	379.2394714355469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VGGRGAKL_	REV__ENST00000505031.6_1_12:133314934-133315033:-|nuORF	28.2542754592877	0.7411748056684583	6				NaN	NaN	0	NaN	8906	3481	12382
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12407	32.816	NaN	71932	30	0	24166	0.214				-1	 	0	91	466.29325755772993	930.5719621822599	2	466.2944030761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8921	3484	12406
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12408	32.82	NaN	38583	30	0	5687.3	0.106				-1	 	0	88	543.8173362018172	1085.6201194704342	2	543.8192749023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8922	3484	12406
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12409	32.822	NaN	12101	30	0	1878.5	0.106			+	33840	RRATNKSY	8	81	498.2722615915182	994.5299702498364	2	498.2735290527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RRATNKSY_	REV__ENST00000397560.6_1_7:139790765-139790798:-|nuORF	51.33545320467046	0.5859736979383976	6				NaN	NaN	0	NaN	8923	3484	12406
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12410	32.824	NaN	19766	30	0	3346.3	0.106	+			6227	AVRRARPD	8	78	470.7740491118597	939.5335452905194	2	470.7763977050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVRRARPD_	ENST00000529014.5_1_11:10880102-10880318:+|nuORF	42.47446043378293	0.6409579893742323	6				NaN	NaN	0	NaN	8924	3484	12406
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12411	32.826	NaN	20255	30	0	2920.3	0.106	+			18459	ISEKKAISM	9	86	511.78295522265364	1021.5513575121073	2	511.7849426269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_ISEKKAISM(Oxidation (M))_	ENSG00000203757|ENST00000368145|OR6K3;nc|ENSG00000203757|Q8NGY3|OR6K3	72.87924865735499	0.12833875048249987	6				NaN	NaN	0	NaN	8925	3484	12406
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12412	32.828	NaN	11503	30	0	488.04	0.035				-1	 	0	95	515.7777003426418	1029.5408477520834	2	516.7755737304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8926	3484	12406
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12413	32.828	NaN	13485	30	0	2189	0.139	+			44481	TSRPRRVV	8	79	485.79880717354297	969.583061413886	2	485.7999267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TSRPRRVV_	ENST00000533871.6_2_11:133807790-133814210:-|nuORF	94.00642277110589	0.2653416297186628	6				NaN	NaN	0	NaN	8927	3484	12406
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12431	32.868	NaN	53717	30	0	12116	0.201			+	-1	TRVYRMVM	8	85	544.2730621547261	1086.531571376252	2	544.2750244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_TRVYRM(Oxidation (M))VM(Oxidation (M))_	REV__ENST00000464834.5_1_7:140051750-140055490:-|nuORF;REV__ENST00000484416.5_1_7:140051238-140055490:-|nuORF	54.76467175910256	0.5536104764165384	6				NaN	NaN	0	NaN	8942	3487	12430
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12432	32.871	NaN	22644	30	0	6806.1	0.106	+			36279	SEPMLSHTV	9	85	500.7413164278218	NaN	0	500.7419128417969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEPMLSHTV_	ENSG00000152193|ENST00000282003|OBI1	63.30626980617807	0.13521764763214936	6				NaN	NaN	0	NaN	8943	3487	12430
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12433	32.874	NaN	16246	30	0	2027.9	0.106			+	6987	CQFSLSKQR	9	90	548.7832372305451	1095.55192152789	2	548.7855834960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_CQFSLSKQR_	REV__ENST00000486086.1_1_7:74015315-74016757:+|nuORF	83.6470233535746	0.08277643980271215	6				NaN	NaN	0	NaN	8944	3487	12430
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12434	32.876	NaN	23167	30	0	2099.2	0.106				-1	 	0	79	460.76201930347145	919.5094856737429	2	460.7631530761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8945	3487	12430
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12435	32.877	NaN	17182	30	0	9219.9	0.106			+	-1	SMKVKALCLRE	11	68	431.90519020074544	1292.6937412024363	3	431.90618896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_SM(Oxidation (M))KVKALCLRE_	REV__ENST00000603486.5_1_6:46626680-46630132:+|nuORF	21.0322348234405	0.7691802065814517	6				NaN	NaN	0	NaN	8946	3487	12430
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12436	32.879	NaN	8885.5	30	0	659.67	0.035	+			14356	GTAALGCLVK	10	83	495.27402251121407	988.5334920892282	2	495.2755432128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_GTAALGC(Carbamidomethyl (C))LVK_	ENST00000390555.3_1_14:106135325-106136152:-|nuORF;nc|ENSG00000211896|P01857-1|IGHG1;nc|ENSG00000211896|P01857|IGHG1;nc|ENSG00000211897|P01860-1|IGHG3;nc|ENSG00000211897|P01860|IGHG3	87.69643885390035	0.14426223466775756	6				NaN	NaN	0	NaN	8947	3487	12430
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12437	32.88	NaN	16375	30	0	1559	0.14				-1	 	0	87	519.2838117263375	1036.5530705194749	2	519.2852783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8948	3487	12430
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12455	32.919	NaN	54771	30	0	5843.1	0.214				-1	 	0	94	464.2595536528839	926.5045543725678	2	464.2607727050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8963	3490	12454
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12456	32.923	NaN	20925	30	0	1992.7	0.106				-1	 	0	86	468.26752579879303	934.5204986643861	2	469.2711181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8964	3490	12454
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12457	32.925	NaN	11467	30	0	1726	0.106				-1	 	0	57	394.23595664369344	786.4573603541869	2	394.23724365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8965	3490	12454
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12458	32.926	NaN	12200	30	0	1043.4	0.106				-1	MSFFHRLY	8	72	558.768226980639	1115.521901028078	2	558.7700805664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_M(Oxidation (M))SFFHRLY_	ENSG00000137691|ENST00000434758|CFAP300;ENST00000530659.1_1_11:101918495-101953927:+|nuORF;nc|ENSG00000137691|Q9BRQ4-2|CFAP300	60.29395666154354	0.49887135096048313	6				NaN	NaN	0	NaN	8966	3490	12454
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12459	32.928	NaN	12161	30	0	1130.5	0.106			+	13132	GGMFGVVFLI	10	88	520.2853474711753	NaN	0	520.2874145507812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GGMFGVVFLI_	REV__ENSG00000132429|ENST00000254765|POPDC3;REV__POPDC3|p.S232Qfs*3|1|0.22|ENSG00000132429|chr6:105158652-105158652|A/-|frameshift_variant	65.89745868150666	0.18611864392217875	6				NaN	NaN	0	NaN	8967	3490	12454
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12460	32.93	NaN	14548	30	0	1057.1	0.106			+	-1	PCERLRSL	8	86	515.7777003426418	1029.5408477520834	2	515.7801513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_PC(Carbamidomethyl (C))ERLRSL_	REV__ENSG00000104059|ENST00000261275|ENTREP2	66.42927471994793	0.4381325844043345	6				NaN	NaN	0	NaN	8968	3490	12454
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12461	32.932	NaN	15031	30	0	1862.8	0.034				-1	 	0	74	453.7544341824455	905.494315431691	2	453.7557067871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8969	3490	12454
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12478	32.965	NaN	400000	30	0	64795	0.122	+			12621	GEIDGNKVTL	10	83	523.2783302205938	1044.5421075079876	2	523.2804565429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEIDGNKVTL_	ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232319904-232323320:-|nuORF	152.06079943815163	0.008129625933261015	6				NaN	NaN	0	NaN	8983	3493	12477
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12479	32.967	NaN	32846	30	0	5692.9	0.106	+			26307	LSVMPNELV	9	78	501.27240964487964	1000.5302663565593	2	501.274169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSVMPNELV_	tr|U7T5E1|U7T5E1_FUSNU16SrRNA(cytosine(967)-C(5))-methyltransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00032PE=3SV=1	71.87747018426188	0.13267044672804276	6				NaN	NaN	0	NaN	8984	3493	12477
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12480	32.969	NaN	39059	30	0	8559.6	0.106	+			21096	KKPRKCSLCH	10	83	600.3284846305955	1198.642416327991	2	600.3303833007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KKPRKCSLCH_	ENSG00000177302|ENST00000321105|TOP3A;nc|ENSG00000177302|Q13472-2|TOP3A;nc|ENSG00000177302|Q13472-3|TOP3A	54.776311868738084	0.41334902933431344	6				NaN	NaN	0	NaN	8985	3493	12477
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12481	32.971	NaN	32546	30	0	11408	0.106	+			50531	YAPSTYAHL	9	83	511.7493212626314	1021.4840895920628	2	511.7507019042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YAPSTYAHL_	ENSG00000105699|ENST00000605618|LSR;LSR|p.S424Qfs*10|1|0.5|ENSG00000105699|chr19:35266941-35266942|-/C|frameshift_variant;nc|ENSG00000105699|Q86X29-2|LSR;nc|ENSG00000105699|Q86X29-3|LSR;nc|ENSG00000105699|Q86X29-4|LSR;nc|ENSG00000105699|Q86X29-5|LSR;nc|ENSG00000105699|Q86X29-6|LSR;nc|ENSG00000105699|Q86X29|LSR	73.97473282117947	0.12360187025703594	6				NaN	NaN	0	NaN	8986	3493	12477
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12482	32.973	NaN	15481	30	0	2468.2	0.106	+			27190	MEAARRSL	8	92	475.2494084089089	948.4842638846178	2	475.2496643066406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_M(Oxidation (M))EAARRSL_	ENSG00000139737|ENST00000418532|SLAIN1;nc|ENSG00000139737|Q8ND83-4|SLAIN1;nc|ENSG00000139737|Q8ND83|SLAIN1;SLAIN1|p.G311Rfs*4|1|0.24|ENSG00000139737|chr13:77746586-77746587|-/A|frameshift_variant;SLAIN1|p.H465Afs*11|1|0.37|ENSG00000139737|chr13:77760867-77760868|-/G|frameshift_variant;SLAIN1|p.T312Hfs*96|1|0.28|ENSG00000139737|chr13:77746587-77746587|A/-|frameshift_variant	66.42927471994793	0.4381325844043345	6				NaN	NaN	0	NaN	8987	3493	12477
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12483	32.975	NaN	15796	30	0	1917.4	0.106	+			13026	GEVLISRV	8	77	436.76245991880614	871.5103669044123	2	436.76348876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GEVLISRV_	AP2M1|p.I386Hfs*6|1|0.17|ENSG00000161203|chr3:184182844-184182845|-/C|frameshift_variant;ENSG00000161203|ENST00000292807|AP2M1;ENST00000466598.5_1_3:183894781-183896942:+|nuORF;ENST00000472560.5_1_3:183894781-183898834:+|nuORF;ENST00000484469.5_1_3:183894781-183895400:+|nuORF;ENST00000487958.5_1_3:183894781-183898060:+|nuORF;nc|ENSG00000161203|Q96CW1-2|AP2M1	77.31757898189308	0.345924878368729	6				NaN	NaN	0	NaN	8988	3493	12477
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12484	32.977	NaN	18594	30	0	7895.5	0.106				-1	 	0	66	477.7832870899289	953.5520212466578	2	477.7845458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8989	3493	12477
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12485	32.978	NaN	23305	30	0	2138.5	0.034				-1	 	0	78	460.78039861096073	919.5462442887215	2	460.7815856933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	8990	3493	12477
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12502	33.012	NaN	30274	30	0	4451.4	0.214			+	16626	HHAWFSRQ	8	93	534.7592626027221	1067.503972272244	2	534.7609252929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HHAWFSRQ_	REV__ENST00000393067.7_1_11:111250173-111250392:-|nuORF	55.50420428727701	0.5462892107279674	6				NaN	NaN	0	NaN	9004	3496	12501
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12503	33.016	NaN	20202	30	0	2780	0.106	+			10632	EYNSDLHQF	9	85	576.7518876827098	NaN	0	576.7516479492188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EYNSDLHQF_	BUB1|p.V819Gfs*61|1|0.11|ENSG00000169679|chr2:110642126-110642127|-/C|frameshift_variant;ENSG00000169679|ENST00000302759|BUB1;ENST00000465029.5_1_2:111419157-111435602:-|nuORF;nc|ENSG00000169679|O43683-2|BUB1;nc|ENSG00000169679|O43683-3|BUB1	190.2614974402762	0.0011098154530388054	6				NaN	NaN	0	NaN	9005	3496	12501
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12504	33.018	NaN	68146	30	0	17496	0.106			+	-1	ILFCSIIIL	9	114	364.556014634853	1090.646214504759	3	364.55712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_ILFC(Carbamidomethyl (C))SIIIL_	REV__tr|U7SKK2|U7SKK2_FUSNULipoproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02018PE=4SV=1	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	9006	3496	12501
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12505	33.02	NaN	13386	30	0	1993	0.106			+	9632	ELRCCCLVL	9	88	526.2595942934566	1050.5046356537132	2	526.2616577148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ELRCCCLVL_	REV__ENST00000536896.2_1_1:26145517-26146111:-|nuORF	55.50420428727701	0.2510918378945873	6				NaN	NaN	0	NaN	9007	3496	12501
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12506	33.022	NaN	9671.1	30	0	1829.5	0.106			+	-1	KKMVYLVY	8	78	530.2993768395377	1058.5842007458753	2	530.30078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_KKM(Oxidation (M))VYLVY_	REV__ENST00000402676.6_1_6:151677651-151677711:+|nuORF	35.200714571348534	0.6875396545722289	6				NaN	NaN	0	NaN	9008	3496	12501
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12507	33.023	NaN	6391.4	30	0	588.57	0.106				-1	 	0	72	455.27825182337557	908.5419507135512	2	455.2791748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9009	3496	12501
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12508	33.025	NaN	7710.7	30	0	1130.6	0.037	+			34302	RTLPFRSSGP	10	76	373.2082385482445	1116.6028862449334	3	373.2096252441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RTLPFRSSGP_	nc|ENSG00000145014|Q2T9K0-4|TMEM44	27.882242232435846	0.6521336255503853	6				NaN	NaN	0	NaN	9010	3496	12501
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12521	33.052	NaN	290910	30	0	112800	0.136	+			15000	GTMTGMLYK	9	97	501.24197315961703	1000.4693933860341	2	501.243408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTMTGMLYK_	ENSG00000178440|ENST00000651763|TIMM23B-AGAP6;ENSG00000204152|ENST00000651259|TIMM23B;ENSG00000265354|ENST00000580018|TIMM23;nc|ENSG00000204152|Q5SRD1-2|TIMM23B	118.74307786436346	0.02196067127630568	6				NaN	NaN	0	NaN	9020	3499	12520
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12522	33.055	NaN	93846	30	0	21038	0.09			+	13504	GLNYFVQL	8	89	477.25866022602736	952.5027675188547	2	477.2595520019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GLNYFVQL_	REV__COG5|p.K795Rfs*18|1|0.42|ENSG00000164597|chr7:107210547-107210547|T/-|frameshift_variant;REV__ENSG00000164597|ENST00000297135|COG5;REV__nc|ENSG00000164597|Q9UP83-1|COG5;REV__nc|ENSG00000164597|Q9UP83-3|COG5;REV__nc|ENSG00000164597|Q9UP83|COG5	79.9392285194092	0.32408006123154964	6				NaN	NaN	0	NaN	9021	3499	12520
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12523	33.057	NaN	123270	30	0	26673	0.106				-1	 	0	94	518.2941701386288	1034.5737873440576	2	518.2953491210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9022	3499	12520
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12524	33.058	NaN	39826	30	0	17080	0.106				-1	NITLMCIVIG	10	97	364.8648812874108	1091.5728144624325	3	364.8659973144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_NITLM(Oxidation (M))CIVIG_	ENSG00000113721|ENST00000261799|PDGFRB;ENST00000520579.5_1_5:149495328-149514444:-|nuORF;nc|ENSG00000113721|P09619-2|PDGFRB;PDGFRB|p.S1043Afs*2|1|0.11|ENSG00000113721|chr5:150117629-150117629|G/-|frameshift_variant	45.97224482568171	0.49411383603842696	6				NaN	NaN	0	NaN	9023	3499	12520
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12525	33.06	NaN	34169	30	0	3730.8	0.106			+	27186	MDTDKLMVI	9	98	549.2655353964951	1096.5165178597902	2	549.267822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Oxidation (M)	_M(Oxidation (M))DTDKLM(Oxidation (M))VI_	REV__ENSG00000187537|ENST00000547848|POTEG;REV__ENSG00000198062|ENST00000343518|POTEH;REV__ENSG00000222036|ENST00000547889|POTEM;REV__nc|ENSG00000187537|Q6S5H5-2|POTEG;REV__nc|ENSG00000187537|Q6S5H5-4|POTEG;REV__nc|ENSG00000198062|Q6S545-2|POTEH;REV__POTEH|p.L194H|1|0.04|ENSG00000198062|chr22:15690658-15690658|T/A|missense_variant	113.41158876095287	0.025516849225023126	6				NaN	NaN	0	NaN	9024	3499	12520
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12526	33.062	NaN	10404	30	0	1357.6	0.106	+			964	AEKALFRAL	9	75	340.2060824269212	NaN	0	340.2062072753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AEKALFRAL_	ENSG00000055044|ENST00000264279|NOP58;ENSG00000101361|ENST00000329276|NOP56	70.8162118820467	0.10318768208603292	6				NaN	NaN	0	NaN	9025	3499	12520
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12527	33.064	NaN	12885	30	0	2179	0.106			+	25370	LPGQDEPSLTF	11	78	602.2979123370535	1202.581271740907	2	602.2997436523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LPGQDEPSLTF_	REV__CXADR|p.N201Mfs*27|1|0.28|ENSG00000154639|chr21:17560727-17560727|A/-|frameshift_variant;REV__ENSG00000154639|ENST00000284878|CXADR;REV__nc|ENSG00000154639|P78310-2|CXADR;REV__nc|ENSG00000154639|P78310-3|CXADR;REV__nc|ENSG00000154639|P78310-4|CXADR;REV__nc|ENSG00000154639|P78310-5|CXADR;REV__nc|ENSG00000154639|P78310-6|CXADR;REV__nc|ENSG00000154639|P78310-7|CXADR	28.081489160057373	0.6952392775027776	6				NaN	NaN	0	NaN	9026	3499	12520
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12528	33.066	NaN	16903	30	0	7006.7	0.036	+			37269	SLAFLLMFI	9	64	352.2052010522535	1053.5937737569607	3	352.2061462402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_SLAFLLMFI_	ENSG00000183160|ENST00000392806|TMEM119;TMEM119|p.G146Afs*114|1|0.22|ENSG00000183160|chr12:108591947-108591947|C/-|frameshift_variant	33.51558372728122	0.4900267029546261	6				NaN	NaN	0	NaN	9027	3499	12520
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12548	33.1	NaN	112880	30	0	23637	0.214	+			51184	YPIEHGIIT	9	116	521.7807324872424	1041.5469120412847	2	521.7827758789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YPIEHGIIT_	ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENST00000428275.1_1_X:53172740-53172956:-|nuORF;ENST00000473016.1_1_2:74120109-74129648:+|nuORF;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000488967.5_1_10:90706975-90712518:-|nuORF	51.19269402634007	0.2889735674168909	6				NaN	NaN	0	NaN	9044	3502	12547
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12549	33.104	NaN	36701	30	0	4532.1	0.106				-1	GGDTGGGRHK	10	97	492.2368536310968	982.4591543289936	2	492.23870849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))GGDTGGGRHK_	ENST00000504830.5_3_5:33684015-33684057:-|nuORF	49.536043120802724	0.461275219792494	6				NaN	NaN	0	NaN	9045	3502	12547
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12550	33.106	NaN	20916	30	0	4182.6	0.106	+			34748	RYALQMEQL	9	87	584.2937508866555	1166.572948840111	2	584.2959594726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_RYALQM(Oxidation (M))EQL_	ENSG00000111057|ENST00000388835|KRT18;ENST00000411618.1_1_9:30799684-30799825:-|nuORF;ENST00000549078.5_1_12:53344429-53346127:+|nuORF	126.24258497203832	0.01742065577488747	6				NaN	NaN	0	NaN	9046	3502	12547
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12551	33.108	NaN	12924	30	0	1453.8	0.106			+	11432	FLTYMCLTI	9	83	552.7788804774415	1103.5432080216829	2	553.2827758789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FLTYMCLTI_	REV__ENSG00000101892|ENST00000218008|ATP1B4;REV__nc|ENSG00000101892|Q9UN42-2|ATP1B4	69.6276240434122	0.14239879520340665	6				NaN	NaN	0	NaN	9047	3502	12547
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12552	33.11	NaN	13665	30	0	6799.7	0.106				-1	 	0	76	463.2936300089858	924.5727070847717	2	463.2952880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9048	3502	12547
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12553	33.111	NaN	11413	30	0	2036.7	0.106	+			37572	SLMVVYTPI	9	100	511.78295522265364	1021.5513575121073	2	511.2848815917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLMVVYTPI_	ABCA6|p.D1552Gfs*18|1|0.04|ENSG00000154262|chr17:69081107-69081108|-/C|frameshift_variant;ABCA6|p.I1144Mfs*6|1|0.11|ENSG00000154262|chr17:69091239-69091240|-/CTTTTCCC|frameshift_variant;ABCA6|p.N544Kfs*4|1|0.41|ENSG00000154262|chr17:69114912-69114913|-/T|frameshift_variant;ENSG00000154262|ENST00000284425|ABCA6;nc|ENSG00000154262|Q8N139-2|ABCA6;nc|ENSG00000154262|Q8N139-3|ABCA6	45.9519527083369	0.35044536499095585	6				NaN	NaN	0	NaN	9049	3502	12547
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12554	33.113	NaN	9156.8	30	0	2927.1	0.038	+			32628	QYSDINNRW	9	78	598.2771640984479	1194.5397752636957	2	598.2788696289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QYSDINNRW_	ENSG00000173898|ENST00000533211|SPTBN2;nc|ENSG00000173898|O15020-2|SPTBN2;SPTBN2|p.P924Qfs*35|1|0.39|ENSG00000173898|chr11:66701629-66701629|G/-|frameshift_variant	90.36981228632155	0.0638227155548745	6				NaN	NaN	0	NaN	9050	3502	12547
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12570	33.144	NaN	31203	30	0	5408.2	0.214	+			17763	IERYPEETL	9	86	575.2917143373984	1148.5688757415967	2	575.2940673828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IERYPEETL_	ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC;PRKDC|p.K3681Nfs*6|1|0.32|ENSG00000253729|chr8:47785174-47785177|TTCT/-|frameshift_variant;PRKDC|p.M3670*|1|0.5|ENSG00000253729|chr8:47785212-47785212|T/-|frameshift_variant;PRKDC|p.M3846Cfs*12|1|0.13|ENSG00000253729|chr8:47779047-47779047|T/-|frameshift_variant;PRKDC|p.M4020Cfs*2|1|0.31|ENSG00000253729|chr8:47776968-47776968|T/-|frameshift_variant;PRKDC|p.N3605Kfs*3|1|0.22|ENSG00000253729|chr8:47788993-47788994|-/T|frameshift_variant;PRKDC|p.N4037Ifs*15|1|0.17|ENSG00000253729|chr8:47776916-47776916|T/-|frameshift_variant;PRKDC|p.S4099Qfs*6|1|0.25|ENSG00000253729|chr8:47774265-47774265|A/-|frameshift_variant	112.10723106719422	0.02684780151337622	6				NaN	NaN	0	NaN	9063	3505	12569
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12571	33.148	NaN	34974	30	0	2234.2	0.106			+	30806	QEARLHRLDA	10	93	604.827979696639	1207.6414064600779	2	604.8298950195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QEARLHRLDA_	REV__ENST00000485715.2_1_22:20024321-20049197:+|nuORF	69.6276240434122	0.2803623802747859	6				NaN	NaN	0	NaN	9064	3505	12569
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12572	33.15	NaN	81819	30	0	18811	0.106	+			14379	GTAGPRAAEI	10	77	471.7542860085538	941.4940190839076	2	471.755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTAGPRAAEI_	ENST00000600947.5_2_19:50170377-50176985:+|nuORF;nc|ENSG00000126453|Q9HB09-2|BCL2L12	52.936696900407355	0.4300801048568001	6				NaN	NaN	0	NaN	9065	3505	12569
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12573	33.152	NaN	12158	30	0	1059.7	0.106	+			23562	LALDASQHSSL	11	85	571.2962044080939	NaN	0	571.2964477539062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LALDASQHSSL_	ENSG00000113621|ENST00000358387|TXNDC15;nc|ENSG00000113621|Q96J42-2|TXNDC15	122.93914200107957	0.0005629433020306345	6				NaN	NaN	0	NaN	9066	3505	12569
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12574	33.153	NaN	15511	30	0	1215.2	0.106	+			31917	QQLKTAVEE	9	87	523.2783302205938	1044.5421075079876	2	525.2864990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QQLKTAVEE_	ENSG00000075399|ENST00000389386|VPS9D1;nc|ENSG00000075399|Q9Y2B5-2|VPS9D1;VPS9D1|p.A504Gfs*67|1|0.5|ENSG00000075399|chr16:89709313-89709314|-/C|frameshift_variant	56.72105179125745	0.24094814563026265	6				NaN	NaN	0	NaN	9067	3505	12569
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12575	33.155	NaN	6583.7	30	0	744.5	0.106			+	43395	TGGSVRLHG	9	66	442.2415735590614	882.4685941849228	2	442.242919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TGGSVRLHG_	REV__ENST00000362057.3_1_9:117266551-117266902:-|nuORF	42.396135135203025	0.392153681582562	6				NaN	NaN	0	NaN	9068	3505	12569
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12576	33.157	NaN	6942.3	30	0	545.02	0.036	+			27149	MAYGHIDSY	9	92	528.7252918139723	1055.4360306947444	2	528.727294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MAYGHIDSY_	ENSG00000181191|ENST00000374571|PJA1;nc|ENSG00000181191|Q8NG27|PJA1	85.35947970620816	0.07794846947388434	6				NaN	NaN	0	NaN	9069	3505	12569
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12594	33.193	NaN	115590	30	0	17416	0.168			+	29706	PHEDRKNN	8	103	505.24359024536534	1008.4726275575307	2	505.24493408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PHEDRKNN_	REV__DGKD|p.G855Vfs*48|1|0.29|ENSG00000077044|chr2:233457306-233457306|G/-|frameshift_variant;REV__ENSG00000077044|ENST00000264057|DGKD;REV__ENST00000490764.5_1_2:234327938-234366271:+|nuORF;REV__nc|ENSG00000077044|Q16760-2|DGKD	90.77665401227738	0.27511901818546464	6				NaN	NaN	0	NaN	9084	3508	12593
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12595	33.195	NaN	39812	30	0	12069	0.106	+			10013	ERRGSPVSPV	10	85	361.8684511831822	1082.5835241497466	3	361.86956787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ERRGSPVSPV_	FAM83H|p.P917S|1|0.14|ENSG00000180921|chr8:143726712-143726712|G/A|missense_variant	45.02220120713402	0.5028680121232791	6				NaN	NaN	0	NaN	9085	3508	12593
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12596	33.197	NaN	25228	30	0	4463.5	0.106			+	-1	ICSRAGFIVSV	11	73	403.5541352808799	1207.6405764428398	3	403.5552673339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_IC(Carbamidomethyl (C))SRAGFIVSV_	REV__ENSG00000011198|ENST00000644371|ABHD5	41.080066990542036	0.5431644350485484	6				NaN	NaN	0	NaN	9086	3508	12593
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12597	33.199	NaN	17562	30	0	2527.7	0.106				-1	 	0	79	485.79880717354297	969.583061413886	2	485.7999267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9087	3508	12593
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12598	33.201	NaN	19080	30	0	3804.7	0.106			+	21547	KNTKTRKN	8	84	495.2961709235519	988.5777889139039	2	495.2976379394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KNTKTRKN_	REV__ENST00000519204.5_1_5:167690101-167690218:+|nuORF	47.95952297671804	0.6069220427029525	6				NaN	NaN	0	NaN	9088	3508	12593
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12599	33.203	NaN	14507	30	0	2588.6	0.106			+	28739	NNTAKIRHP	9	77	525.7930440811181	1049.571535229036	2	525.7945556640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NNTAKIRHP_	REV__ENSG00000198431|ENST00000525566|TXNRD1;REV__ENST00000524698.5_2_12:104681148-104742190:+|nuORF;REV__ENST00000525566.5_2_12:104609571-104742190:+|nuORF;REV__ENST00000526390.5_1_12:104683270-104742190:+|nuORF;REV__ENST00000526691.5_1_12:104680955-104742190:+|nuORF;REV__ENST00000526950.1_1_12:104703637-104742190:+|nuORF;REV__ENST00000529546.5_1_12:104682722-104742190:+|nuORF;REV__nc|ENSG00000198431|Q16881-2|TXNRD1;REV__nc|ENSG00000198431|Q16881-3|TXNRD1;REV__nc|ENSG00000198431|Q16881-4|TXNRD1;REV__nc|ENSG00000198431|Q16881-5|TXNRD1;REV__nc|ENSG00000198431|Q16881-6|TXNRD1;REV__nc|ENSG00000198431|Q16881-7|TXNRD1;REV__TXNRD1|p.G297D|1|0.25|ENSG00000198431|chr12:104319486-104319486|G/A|missense_variant	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	9089	3508	12593
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12600	33.205	NaN	9826.9	30	0	1511.8	0.036			+	45043	TVGFNRGGRQ	10	84	546.2881894118169	1090.5618258904337	2	546.290283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TVGFNRGGRQ_	REV__L1ME1_dup14741|chr8:25510836-25512219:-|1.4707505823140987|0.2188578600898351|2.75|482.0|44|2|sense	64.20726635412375	0.3275756395432415	6				NaN	NaN	0	NaN	9090	3508	12593
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12618	33.242	NaN	18557	30	0	1968.2	0.214			+	44732	TTLTEEVNY	9	86	535.2554086051455	1068.4962642770909	2	535.257080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTLTEEVNY_	REV__ENSG00000101350|ENST00000375712|KIF3B;REV__KIF3B-TOX2|1|fusion;REV__KIF3B-TOX2|2|fusion;REV__nc|ENSG00000101350|O15066-2|KIF3B	55.50420428727701	0.2510918378945873	6				NaN	NaN	0	NaN	9105	3511	12617
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12619	33.246	NaN	30189	30	0	2547.4	0.106	+			20813	KIFEDQLKQ	9	94	574.8216987025905	1147.628844471981	2	574.82470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KIFEDQLKQ_	ENSG00000204010|ENST00000371809|IFIT1B	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	9106	3511	12617
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12620	33.248	NaN	9824.5	30	0	1707.5	0.106				-1	 	0	66	437.27247044739033	872.5303879615807	2	437.273681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9107	3511	12617
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12621	33.25	NaN	12513	30	0	1668.3	0.106	+			7705	DLPMEIDIVI	10	83	587.3074909539816	1172.6004289747632	2	587.309326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_DLPM(Oxidation (M))EIDIVI_	sp|F5HH39|UL21A_HCMVMUncharacterizedproteinUL21AOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL21APE=3SV=1;sp|Q7M6R1|UL21A_HCMVAUncharacterizedproteinUL21AOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL21APE=3SV=1	76.7741389293348	0.22197596950688292	6				NaN	NaN	0	NaN	9108	3511	12617
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12622	33.252	NaN	13417	30	0	6832.6	0.106			+	-1	AVLEILLMLM	10	75	387.89247155996213	1160.6555852800864	3	387.89361572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_AVLEILLMLM(Oxidation (M))_	REV__ENSG00000162402|ENST00000294383|USP24;REV__USP24|p.E797*|1|0.32|ENSG00000162402|chr1:55144177-55144178|-/A|frameshift_variant;REV__USP24|p.F796Lfs*4|1|0.37|ENSG00000162402|chr1:55144178-55144178|A/-|frameshift_variant;REV__USP24|p.I478Ffs*12|1|0.09|ENSG00000162402|chr1:55156962-55156962|T/-|frameshift_variant;REV__USP24|p.Y1733Tfs*10|1|0.35|ENSG00000162402|chr1:55100913-55100913|A/-|frameshift_variant	30.317721548370564	0.6322445173429027	6				NaN	NaN	0	NaN	9109	3511	12617
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12623	33.253	NaN	13412	30	0	1446.1	0.037	+			12853	GEPGCTQAQVL	11	82	580.2735528410432	1158.5325527488862	2	580.2740478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_GEPGC(Carbamidomethyl (C))TQAQVL_	ENSG00000137076|ENST00000314888|TLN1;nc|ENSG00000137076|Q9Y490-2|TLN1;TLN1|p.P1628Rfs*20|1|0.44|ENSG00000137076|chr9:35707144-35707144|G/-|frameshift_variant	77.53327743719008	0.17293716712445248	6				NaN	NaN	0	NaN	9110	3511	12617
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12624	33.254	NaN	12284	30	0	1784.5	0.14	+			9528	ELAQNRLH	8	87	490.7689567448722	NaN	0	490.7689514160156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ELAQNRLH_	ENSG00000006757|ENST00000381042|PNPLA4;nc|ENSG00000006757|P41247-2|PNPLA4	73.97473282117947	1.7418937515398478	6				NaN	NaN	0	NaN	9111	3511	12617
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12642	33.293	NaN	63604	30	0	14297	0.215				-1	CPTWKCTR	8	96	526.244503686662	1050.474454440124	2	526.2459716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_CPTWKC(Carbamidomethyl (C))TR_	ENST00000394412.7_1_15:90192583-90193091:-|nuORF	42.396135135203025	0.6414440140393314	6				NaN	NaN	0	NaN	9126	3514	12641
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12643	33.297	NaN	42755	30	0	14993	0.106			+	7876	DRKMMNLK	8	91	518.2750973860483	1034.5356418388965	2	518.77685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DRKMMNLK_	REV__ENSG00000178965|ENST00000326665|ERICH3;REV__ERICH3|p.E543Rfs*16|1|0.36|ENSG00000178965|chr1:74599795-74599795|T/-|frameshift_variant;REV__ERICH3|p.E543Rfs*3|1|0.13|ENSG00000178965|chr1:74599794-74599795|-/T|frameshift_variant;REV__ERICH3|p.P407Tfs*7|2|0.18|ENSG00000178965|chr1:74606871-74606872|-/T|frameshift_variant;REV__ERICH3|p.R829Kfs*25|1|0.29|ENSG00000178965|chr1:74573224-74573225|-/T|frameshift_variant;REV__ERICH3|p.S513Ifs*2|1|0.49|ENSG00000178965|chr1:74599884-74599885|-/T|frameshift_variant;REV__ERICH3|p.T766Rfs*23|1|0.29|ENSG00000178965|chr1:74573414-74573414|T/-|frameshift_variant	44.116797842482775	0.6307669463330267	6				NaN	NaN	0	NaN	9127	3514	12641
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12644	33.299	NaN	17722	30	0	960.85	0.106				-1	 	0	87	521.335471955841	1040.6563909784818	2	521.3370971679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9128	3514	12641
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12645	33.301	NaN	14194	30	0	2535.7	0.106				-1	 	0	80	451.26993222976165	900.5253115263233	2	451.2708435058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9129	3514	12641
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12646	33.303	NaN	18824	30	0	2280.5	0.106	+			17377	IALVHTDSY	9	93	509.7625666417171	1017.5105803502342	2	509.7637939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IALVHTDSY_	ENSG00000198961|ENST00000361189|PJA2;nc|ENSG00000198961|O43164-2|PJA2;PJA2|p.D450Rfs*6|1|0.16|ENSG00000198961|chr5:109368682-109368683|-/T|frameshift_variant	131.03138772384656	0.014687601201650916	6				NaN	NaN	0	NaN	9130	3514	12641
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12647	33.304	NaN	10075	30	0	1501.3	0.036	+			27425	MLARMNKIN	9	83	553.793413593443	1105.572274253686	2	553.7958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_MLARM(Oxidation (M))NKIN_	ENSG00000183091|ENST00000397345|NEB;nc|ENSG00000183091|P20929-3|NEB;NEB|p.L4198Cfs*51|1|0.35|ENSG00000183091|chr2:151568357-151568357|G/-|frameshift_variant;NEB|p.N3442Tfs*4|1|0.2|ENSG00000183091|chr2:151618297-151618297|T/-|frameshift_variant	82.30502934623384	0.08758161712619916	6				NaN	NaN	0	NaN	9131	3514	12641
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12648	33.305	NaN	14878	30	0	1507.6	0.141	+			41464	SVNNSIFYR	9	92	550.280434832302	1098.546316731404	2	550.280517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVNNSIFYR_	DHX16|p.I1033*|5|0.32|ENSG00000204560|chr6:30653271-30653271|T/-|frameshift_variant;DHX16|p.R868Lfs*15|1|0.04|ENSG00000204560|chr6:30655493-30655493|C/-|frameshift_variant;ENSG00000204560|ENST00000376442|DHX16	75.04331003522576	0.118981335847003	6				NaN	NaN	0	NaN	9132	3514	12641
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12665	33.341	NaN	63195	30	0	23053	0.214				-1	 	0	97	539.2992384661189	1076.5839239990378	2	539.3013305664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9146	3517	12664
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12666	33.345	NaN	56558	30	0	10246	0.106	+			41577	SVQGAALVQIK	11	92	557.3337877991044	1112.6530226650086	2	557.3359985351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVQGAALVQIK_	chr16:1980544-1980641|439|11.94|0.64|4.22|-|ENST00000566005|NOXO1,NOXO1;chr16:1980728-1980939|449|16.41|0.86|4.26|-|ENST00000566005|NOXO1,NOXO1;ENSG00000196408|ENST00000356120|NOXO1;nc|ENSG00000196408|Q8NFA2-2|NOXO1;nc|ENSG00000196408|Q8NFA2-4|NOXO1;nc|ENSG00000196408|Q8NFA2|NOXO1	206.35961359924863	4.721094791083222E-09	6				NaN	NaN	0	NaN	9147	3517	12664
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12667	33.347	NaN	42333	30	0	7186.2	0.106	+			17544	IDSRRRLE	8	87	522.7988904511301	1043.58322796906	2	522.8010864257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IDSRRRLE_	ENSG00000145675|ENST00000521381|PIK3R1;ENST00000520550.1_1_5:67588878-67591317:+|nuORF;nc|ENSG00000145675|P27986-2|PIK3R1;nc|ENSG00000145675|P27986-3|PIK3R1;nc|ENSG00000145675|P27986-4|PIK3R1;nc|ENSG00000145675|P27986-5|PIK3R1	71.87747018426188	0.391254423828572	6				NaN	NaN	0	NaN	9148	3517	12664
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12668	33.349	NaN	19637	30	0	2940.7	0.106	+			36848	SIFGGAKPV	9	72	438.2519171312954	874.4892813293908	2	438.25299072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SIFGGAKPV_	ENSG00000063046|ENST00000262056|EIF4B;ENST00000432132.2_1_9:98909238-98910135:+|nuORF;ENST00000432307.1_1_X:110862947-110863739:-|nuORF;nc|ENSG00000063046|P23588-2|EIF4B	71.87747018426188	0.13267044672804276	6				NaN	NaN	0	NaN	9149	3517	12664
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12669	33.351	NaN	21618	30	0	1582.2	0.106	+			41001	SVGSAIWNR	9	93	495.26061135534275	988.5066697774855	2	495.2644958496094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVGSAIWNR_	ENSG00000124406|ENST00000381668|ATP8A1;nc|ENSG00000124406|Q9Y2Q0-2|ATP8A1;nc|ENSG00000124406|Q9Y2Q0-3|ATP8A1	85.16082228582465	0.07850854922700509	6				NaN	NaN	0	NaN	9150	3517	12664
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12670	33.352	NaN	19169	30	0	2623.8	0.035	+			22274	KTCEMESR	8	82	492.21798161600117	982.4214102988024	2	492.2194519042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KTCEMESR_	nc|ENSG00000240344|Q9H2H8-2|PPIL3	90.36981228632155	0.27635063874291205	6				NaN	NaN	0	NaN	9151	3517	12664
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12671	33.353	NaN	23291	30	0	1421	0.139	+			28890	NQGRRTVL	8	85	472.2731349619622	942.5317169907245	2	472.2739562988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NQGRRTVL_	ENSG00000165288|ENST00000373275|BRWD3;nc|ENSG00000165288|Q6RI45-2|BRWD3;nc|ENSG00000165288|Q6RI45-3|BRWD3;nc|ENSG00000165288|Q6RI45-4|BRWD3	82.24051045832904	0.30490469762271794	6				NaN	NaN	0	NaN	9152	3517	12664
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12689	33.392	NaN	71098	30	0	12444	0.177			+	32890	RDLSSTTKQ	9	90	518.2750973860483	1034.5356418388965	2	518.277099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RDLSSTTKQ_	REV__ENSG00000145194|ENST00000404464|ECE2;REV__ENST00000488401.5_1_3:183993962-184009147:+|nuORF;REV__ENST00000490579.1_1_3:183995094-184008674:+|nuORF;REV__nc|ENSG00000145194|P0DPD6-3|ECE2;REV__nc|ENSG00000145194|P0DPD6|ECE2;REV__nc|ENSG00000284917|P0DPD8|EEF1AKMT4-ECE2	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	9167	3520	12688
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12690	33.395	NaN	31565	30	0	11092	0.106	+			11437	FLVMPIGTY	9	94	528.775756792474	1055.536960651748	2	528.7774047851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_FLVM(Oxidation (M))PIGTY_	nc|ENSG00000120907|P35348-7|ADRA1A	60.29395666154354	0.21116425950210296	6				NaN	NaN	0	NaN	9168	3520	12688
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12691	33.398	NaN	41738	30	0	7524.5	0.106			+	22154	KSRMAVCNTL	10	96	569.7888518457753	1137.5631507583505	2	569.7908325195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_KSRM(Oxidation (M))AVCNTL_	REV__ENST00000420836.2_1_12:68429646-68429838:+|nuORF	80.45461616416974	0.1919067876629769	6				NaN	NaN	0	NaN	9169	3520	12688
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12692	33.399	NaN	12725	30	0	3301.9	0.106				-1	SLKKRMEVP	9	81	368.54639275257273	1102.6173488579182	3	368.5475769042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_SLKKRM(Oxidation (M))EVP_	ENSG00000082213|ENST00000325366|C5orf22;nc|nan|Q49AR2-2|C5orf22	27.882242232435846	0.5426732730940306	6				NaN	NaN	0	NaN	9170	3520	12688
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12693	33.401	NaN	11091	30	0	1890.6	0.106				-1	MNKGVCVGLH	10	78	565.7755805336515	1129.5366081341028	2	565.7778930664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))NKGVC(Carbamidomethyl (C))VGLH_	ENST00000545735.1_2_12:12491569-12491605:-|nuORF	47.91560031466742	0.4762067885998563	6				NaN	NaN	0	NaN	9171	3520	12688
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12694	33.403	NaN	8248.5	30	0	496.29	0.106	+			7078	CVLRPRGI	8	69	485.78585559825024	969.5571582633005	2	485.7869567871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_C(Carbamidomethyl (C))VLRPRGI_	KCNH1|p.F216Lfs*10|1|0.35|ENSG00000143473|chr1:211019167-211019167|A/-|frameshift_variant	57.81127852772723	0.5234495074909924	6				NaN	NaN	0	NaN	9172	3520	12688
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12695	33.405	NaN	17069	30	0	1922	0.039				-1	 	0	79	641.8279245442149	1281.6412961552296	2	641.8299560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9173	3520	12688
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12713	33.442	NaN	75196	30	0	15762	0.214				-1	 	0	92	535.2735894183868	1068.5326259035735	2	535.2753295898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9188	3523	12712
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12714	33.446	NaN	49644	30	0	11474	0.106	+			23806	LCPQRVWL	8	96	507.78102314337286	1013.5474933535457	2	507.78240966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LCPQRVWL_	ENST00000599461.1_1_19:21579980-21580034:+|nuORF	52.29916861842294	0.578018602984656	6				NaN	NaN	0	NaN	9189	3523	12712
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12715	33.448	NaN	32217	30	0	3371.7	0.106			+	23536	LAIQNPKF	8	90	465.774097461331	929.533641989462	2	465.7753601074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LAIQNPKF_	REV__ENSG00000283434|ENST00000637986|CSNKA2IP	54.76467175910256	0.5536104764165384	6				NaN	NaN	0	NaN	9190	3523	12712
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12716	33.45	NaN	29403	30	0	4753.9	0.106	+			15001	GTMTGMLYK	9	84	501.24197315961703	1000.4693933860341	2	501.2431945800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTMTGMLYK_	ENSG00000178440|ENST00000651763|TIMM23B-AGAP6;ENSG00000204152|ENST00000651259|TIMM23B;ENSG00000265354|ENST00000580018|TIMM23;nc|ENSG00000204152|Q5SRD1-2|TIMM23B	65.46538089061403	0.16805504838372562	6				NaN	NaN	0	NaN	9191	3523	12712
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12717	33.452	NaN	21112	30	0	4707.4	0.106	+			10293	ETPGVPREAE	10	87	542.7675884850033	1083.5206240368066	2	542.76953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ETPGVPREAE_	ENST00000439332.1_1:144301112-144301436:-|nuORF	41.42661286455405	0.5359995577334734	6				NaN	NaN	0	NaN	9192	3523	12712
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12718	33.454	NaN	34183	30	0	9916.8	0.038			+	43351	TGCLKMKKKAP	11	83	402.234659798621	1203.6821499960631	3	402.2359313964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TGCLKMKKKAP_	REV__SIN3B|p.R289C|1|0.51|ENSG00000127511|chr19:16853084-16853084|C/T|missense_variant	50.033510581677724	0.4206539900604183	6				NaN	NaN	0	NaN	9193	3523	12712
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12719	33.454	NaN	60775	30	0	6775	0.141	+			27828	MSRRMLVGD	9	96	532.7706044425581	1063.5266559519162	2	532.7724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MSRRMLVGD_	ENST00000502926.1_2_5:140806427-140807822:+|nuORF	93.19546047674547	0.05585629608842056	6				NaN	NaN	0	NaN	9194	3523	12712
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12737	33.494	NaN	78918	30	0	33232	0.214			+	-1	AEDCVKCKY	9	86	558.2471249612091	1114.4796969892182	2	558.2492065429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_AEDC(Carbamidomethyl (C))VKCKY_	REV__ENSG00000204604|ENST00000595646|ZNF468;REV__nc|ENSG00000204604|Q5VIY5-2|ZNF468	49.44154591367651	0.3095138337212152	6				NaN	NaN	0	NaN	9209	3526	12736
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12738	33.497	NaN	34056	30	0	6642.1	0.106			+	42221	TAAIRDTLTQ	10	90	545.2989537741958	1088.5833546151914	2	545.3008422851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAAIRDTLTQ_	REV__SNAP91|p.A13T|1|0.39|ENSG00000065609|chr6:83707891-83707891|C/T|missense_variant	48.601550744091256	0.46988609897316763	6				NaN	NaN	0	NaN	9210	3526	12736
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12739	33.499	NaN	37156	30	0	11814	0.106			+	-1	PFLHMARI	8	83	500.7731825631127	999.5318121930254	2	500.7746276855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_PFLHM(Oxidation (M))ARI_	REV__nc|ENSG00000290456|Q8N1L4-2|CYP4Z2P;REV__nc|ENSG00000290456|Q8N1L4|CYP4Z2P	35.200714571348534	0.6875396545722289	6				NaN	NaN	0	NaN	9211	3526	12736
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12740	33.501	NaN	28895	30	0	4581.6	0.106	+			5794	AVHDITVAY	9	82	494.758523034462	NaN	0	494.75836181640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVHDITVAY_	ENSG00000172954|ENST00000379509|LCLAT1;nc|ENSG00000172954|Q6UWP7|LCLAT1	47.91560031466742	0.22105767942158736	6				NaN	NaN	0	NaN	9212	3526	12736
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12741	33.503	NaN	15131	30	0	2584.2	0.106				-1	 	0	90	459.2854978290043	916.5564427248087	2	459.28668212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9213	3526	12736
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12742	33.505	NaN	8301	30	0	1536.9	0.035	+			7073	CVHGWPALL	9	67	498.25986026945964	994.5051676057193	2	498.2613830566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_CVHGWPALL_	ENST00000504398.1_1_5:28809070-28809244:-|nuORF	39.021493756699265	0.43173687394350213	6				NaN	NaN	0	NaN	9214	3526	12736
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12743	33.505	NaN	8886.2	30	0	1588.1	0.14	+			10539	EWTIHAKP	8	74	491.2611951913992	980.5078374495985	2	491.26263427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EWTIHAKP_	ENSG00000149090|ENST00000619888|PAMR1;ENST00000534803.1_1_11:35474916-35547133:-|nuORF;nc|ENSG00000149090|Q6UXH9-2|PAMR1;PAMR1|p.V621Gfs*11|1|0.43|ENSG00000149090|chr11:35432657-35432658|-/C|frameshift_variant	28.2542754592877	0.7411748056684583	6				NaN	NaN	0	NaN	9215	3526	12736
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12761	33.543	NaN	28015	30	0	7551.6	0.214	+			41984	SVYDSVLQK	9	86	519.7764888792606	1037.538424825321	2	519.7769165039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVYDSVLQK_	ENSG00000131018|ENST00000367255|SYNE1;ENST00000490135.6_1_6:152637953-152655276:-|nuORF;nc|ENSG00000131018|Q8NF91-4|SYNE1;nc|ENSG00000131018|Q8NF91-7|SYNE1;SYNE1|p.E4738Kfs*25|1|0.12|ENSG00000131018|chr6:152330474-152330474|T/-|frameshift_variant;SYNE1|p.E5862Gfs*83|1|0.12|ENSG00000131018|chr6:152300729-152300738|CCAGACTCCT/-|frameshift_variant;SYNE1|p.G6773Wfs*7|1|0.44|ENSG00000131018|chr6:152236186-152236187|-/A|frameshift_variant;SYNE1|p.K6871Rfs*22|2|0.52|ENSG00000131018|chr6:152233881-152233881|T/-|frameshift_variant;SYNE1|p.L8283Pfs*8|1|0.19|ENSG00000131018|chr6:152148173-152148174|-/G|frameshift_variant;SYNE1|p.M5602Nfs*13|2|0.32|ENSG00000131018|chr6:152310779-152310780|-/T|frameshift_variant;SYNE1|p.V8635Sfs*12|1|0.15|ENSG00000131018|chr6:152133375-152133375|T/-|frameshift_variant	138.06239232086	0.011389075116295402	6				NaN	NaN	0	NaN	9230	3529	12760
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12762	33.546	NaN	65648	30	0	6958	0.106	+			51565	YYIGDQSNF	9	103	553.742766609263	1105.4709802853258	2	553.74462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YYIGDQSNF_	SLC6A14|p.A299D|1|0.39|ENSG00000268104|chrX:116446847-116446847|C/A|missense_variant	108.08749611321984	0.03094949498378333	6				NaN	NaN	0	NaN	9231	3529	12760
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12763	33.548	NaN	17386	30	0	2804.9	0.106	+			32344	QTWGPGTL	8	65	430.219349430631	858.424145928062	2	430.2204284667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QTWGPGTL_	ENSG00000171608|ENST00000377346|PIK3CD;nc|ENSG00000171608|O00329-2|PIK3CD	47.91560031466742	0.6071945918984287	6				NaN	NaN	0	NaN	9232	3529	12760
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12764	33.55	NaN	10158	30	0	1840.4	0.106	+			7058	CTLHPLWG	8	69	463.7310663764486	925.4475798196972	2	463.73211669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_CTLHPLWG_	PRIMA1|p.A22T|1|0.31|ENSG00000175785|chr14:93787655-93787655|C/T|missense_variant	37.028477286268924	0.6747514403204248	6				NaN	NaN	0	NaN	9233	3529	12760
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12765	33.552	NaN	8255.7	30	0	1523.9	0.106	+			32807	RAVAPTMSL	9	62	473.26225511470676	944.5099572962135	2	473.2623291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RAVAPTMSL_	ENSG00000144560|ENST00000430365|VGLL4;nc|ENSG00000144560|Q14135-2|VGLL4;nc|ENSG00000144560|Q14135-4|VGLL4;nc|ENSG00000144560|Q14135-5|VGLL4;nc|ENSG00000144560|Q14135-6|VGLL4;nc|ENSG00000144560|Q14135|VGLL4	69.6276240434122	0.14239879520340665	6				NaN	NaN	0	NaN	9234	3529	12760
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12766	33.554	NaN	11270	30	0	1395.3	0.037			+	-1	LFCCGLVYGF	10	75	589.7725601643161	1177.5305673954322	2	589.7742919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_LFC(Carbamidomethyl (C))CGLVYGF_	REV__ENSG00000283516|ENST00000636296|LITAFD	35.200714571348534	0.5923680232273616	6				NaN	NaN	0	NaN	9235	3529	12760
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12767	33.554	NaN	7440.4	30	0	1546.8	0.143	+			12096	GAAVLHQRR	9	64	336.5344378546052	NaN	0	336.53424072265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GAAVLHQRR_	ENST00000480991.1_1_1:1597188-1601283:-|nuORF	24.20275056022122	0.35506675290109213	6				NaN	NaN	0	NaN	9236	3529	12760
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12785	33.593	NaN	70844	30	0	8486.5	0.215	+			45782	VAGGGGRRAR	10	95	478.77848435306447	955.542415772929	2	478.7796630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VAGGGGRRAR_	ENST00000382849.2_1_4:2420749-2428195:+|nuORF	68.78682469695295	0.28723163847957256	6				NaN	NaN	0	NaN	9251	3532	12784
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12786	33.596	NaN	111660	30	0	11821	0.106				-1	 	0	99	466.75462963520096	931.4947063372019	2	466.75579833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9252	3532	12784
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12787	33.599	NaN	19176	30	0	1366.8	0.106				-1	 	0	98	507.78102314337286	1013.5474933535457	2	508.78485107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9253	3532	12784
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12788	33.6	NaN	38569	30	0	6577.6	0.106			+	20572	KFTIFVFGQ	9	96	362.8707453557288	1085.5904066673863	3	362.8720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KFTIFVFGQ_	REV__ENST00000406003.2_1_12:10264431-10264902:+|nuORF	38.753607047826485	0.4348790777924195	6				NaN	NaN	0	NaN	9254	3532	12784
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12789	33.602	NaN	30208	30	0	4529.2	0.106			+	-1	RTMSTKCVL	9	95	548.2857921721258	1094.5570314110514	2	549.2908325195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_RTMSTKC(Carbamidomethyl (C))VL_	REV__ENST00000592828.5_1_19:11687597-11687906:-|nuORF	47.657333605630114	0.33044192980041115	6				NaN	NaN	0	NaN	9255	3532	12784
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12790	33.604	NaN	31069	30	0	2595.8	0.036	+			22345	KTGIRVYYS	9	94	543.8018406507603	1085.5891283683204	2	543.804443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KTGIRVYYS_	ENSG00000149639|ENST00000237536|SOGA1;nc|ENSG00000149639|O94964-1|MTCL2;nc|ENSG00000149639|O94964-3|MTCL2;SOGA1|p.P1257L|1|0.31|ENSG00000149639|chr20:36794312-36794312|G/A|missense_variant	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	9256	3532	12784
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12791	33.605	NaN	19367	30	0	3591.7	0.141			+	33887	RRPHQSCSY	9	83	567.2661264801092	1132.5177000270182	2	567.268798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RRPHQSCSY_	REV__ENST00000262207.8_1_8:75896934-75898275:+|nuORF	65.80317337860623	0.1652391959156183	6				NaN	NaN	0	NaN	9257	3532	12784
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12809	33.644	NaN	114550	30	0	17642	0.214				-1	 	0	116	515.7909031342792	1029.5672533353584	2	515.7926635742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9272	3535	12808
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12810	33.647	NaN	49507	30	0	20218	0.106	+			26679	LVGRGSSTSTV	11	101	532.291089773546	1062.567626613892	2	532.292724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LVGRGSSTSTV_	ENST00000339570.9_1_12:125262795-125262981:-|nuORF	72.87924865735499	0.21173632944124365	6				NaN	NaN	0	NaN	9273	3535	12808
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12811	33.649	NaN	41441	30	0	11207	0.106				-1	 	0	99	482.775413515146	963.536274097092	2	482.7765808105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9274	3535	12808
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12812	33.651	NaN	66020	30	0	33932	0.106	+			9704	EMILLLLICQP	11	92	429.2467903169757	1284.7185415511271	3	429.248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EMILLLLICQP_	ENSG00000182793|ENST00000370989|GSTA5	36.446750945000026	0.6065623449959539	6				NaN	NaN	0	NaN	9275	3535	12808
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12813	33.653	NaN	382950	30	0	149150	0.106				-1	 	0	137	329.21727884547073	984.6300071366122	3	329.21832275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9276	3535	12808
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12814	33.655	NaN	10903	30	0	971.98	0.037				-1	 	0	75	571.332838004622	1140.6511230760439	2	571.334716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9277	3535	12808
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12815	33.655	NaN	236760	30	0	20335	0.14				-1	 	0	118	493.32232427916057	984.6300956251212	2	493.3236999511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9278	3535	12808
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12833	33.693	NaN	253980	30	0	20965	0.19			+	-1	TWRGTVTHM	9	123	552.7665544461408	1103.5185559590816	2	552.7686157226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_TWRGTVTHM(Oxidation (M))_	REV__HTR1B|p.Y109H|1|0.28|ENSG00000135312|chr6:77463079-77463079|A/G|missense_variant	76.7741389293348	0.11149722112137898	6				NaN	NaN	0	NaN	9293	3538	12832
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12834	33.697	NaN	305170	30	0	45229	0.106	+			29186	NVIRDAVTY	9	109	525.7809165169804	1049.5472801007606	2	525.78271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NVIRDAVTY_	ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2	120.8684288430529	0.02067403653475984	6				NaN	NaN	0	NaN	9294	3538	12832
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12835	33.699	NaN	100970	30	0	29835	0.106	+			40354	STTQVVGILK	10	101	523.3148688329537	1044.6151847327073	2	523.3165283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STTQVVGILK_	ENSG00000198898|ENST00000361183|CAPZA2;ENST00000426421.5_1_7:116544367-116557918:+|nuORF	181.4070731898895	0.0010958971522004144	6				NaN	NaN	0	NaN	9295	3538	12832
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12836	33.7	NaN	67722	30	0	8724.8	0.106			+	33855	RRHEEIQQ	8	95	548.2857921721258	1094.5570314110514	2	548.2877197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RRHEEIQQ_	REV__ENSG00000113758|ENST00000393565|DBN1;REV__ENST00000472831.5_1_5:176884436-176895158:-|nuORF;REV__nc|ENSG00000113758|Q16643-2|DBN1;REV__nc|ENSG00000113758|Q16643|DBN1	76.7741389293348	0.3504530765139327	6				NaN	NaN	0	NaN	9296	3538	12832
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12837	33.702	NaN	24653	30	0	4814.5	0.106	+			23751	LCCHLRSL	8	71	472.7440083862052	943.4734638392105	2	472.7450866699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LCCHLRSL_	COG1|p.H154R|1|0.35|ENSG00000166685|chr17:73196652-73196652|A/G|missense_variant	88.64286706044652	0.2815785716369046	6				NaN	NaN	0	NaN	9297	3538	12832
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12838	33.704	NaN	20069	30	0	2307.8	0.106	+			33299	RGPTSRLPSP	10	90	534.302018624446	1066.5894843156918	2	534.3040771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RGPTSRLPSP_	ENST00000570551.5_1_16:3508085-3534852:+|nuORF;ENST00000574380.5_1_16:3508085-3533604:+|nuORF	40.05817265558897	0.5486090488315611	6				NaN	NaN	0	NaN	9298	3538	12832
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12839	33.706	NaN	21401	30	0	4835.4	0.031				-1	 	0	67	378.27740643250934	754.5402599318187	2	378.27874755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9299	3538	12832
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12858	33.741	NaN	213020	30	0	28952	0.153	+			21416	KMSRICINI	9	87	539.299076598902	1076.583600264604	2	539.3006591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KMSRICINI_	ENST00000414386.5_1_6:41491709-41491922:-|nuORF	109.47833844074708	0.029530294723441826	6				NaN	NaN	0	NaN	9315	3541	12857
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12859	33.744	NaN	23583	30	0	14037	0.106	+			18087	IKNGLVKL	8	76	442.7986313360203	883.5827097388407	2	442.7994079589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IKNGLVKL_	ENSG00000150961|ENST00000280551|SEC24D;nc|ENSG00000150961|O94855-2|SEC24D	76.84663266511073	0.3498490246073164	6				NaN	NaN	0	NaN	9316	3541	12857
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12860	33.746	NaN	7860.1	30	0	1944.6	0.106			+	18872	IVGPRVTLL	9	64	323.2147514381318	NaN	0	323.2146911621094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IVGPRVTLL_	REV__ENST00000421764.1_1_1:145493952-145507392:-|nuORF;REV__ENST00000601726.3_2_1:145498656-145507389:-|nuORF	27.882242232435846	0.3367954786602879	6				NaN	NaN	0	NaN	9317	3541	12857
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12861	33.748	NaN	16219	30	0	1221.8	0.106			+	-1	SFVHAGREAM	10	102	560.7626225804923	1119.5106922277846	2	560.7647705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_SFVHAGREAM(Oxidation (M))_	REV__ENSG00000064313|ENST00000378164|TAF2;REV__TAF2|p.A1003Lfs*3|1|0.21|ENSG00000064313|chr8:119746807-119746807|T/-|frameshift_variant;REV__TAF2|p.I604Sfs*3|1|0.11|ENSG00000064313|chr8:119785250-119785250|T/-|frameshift_variant	45.02220120713402	0.5028680121232791	6				NaN	NaN	0	NaN	9318	3541	12857
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12862	33.749	NaN	7815.1	30	0	1026	0.106	+			30746	QDLNEKARALK	11	88	643.3663061416428	1284.7180593500855	2	643.3676147460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QDLNEKARALK_	ENSG00000114209|ENST00000392750|PDCD10	66.96192283764107	0.2613103798769313	6				NaN	NaN	0	NaN	9319	3541	12857
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12863	33.751	NaN	10509	30	0	1552.1	0.106	+			11111	FFLQTALSAF	10	89	382.205867862132	1143.595774186596	3	382.5412292480469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FFLQTALSAF_	ENST00000590891.1_1_16:4660442-4660589:-|nuORF	44.116797842482775	0.5112108506279902	6				NaN	NaN	0	NaN	9320	3541	12857
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12864	33.753	NaN	4407.7	30	0	489.2	0.039			+	7701	DLNAIQFQTNQ	11	78	646.3191637286369	1290.6237745240737	2	646.3211059570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DLNAIQFQTNQ_	REV__tr|U7SUB3|U7SUB3_FUSNUButyryl-CoAdehydrogenaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01365PE=3SV=1	70.39856735676683	0.2324169829117963	6				NaN	NaN	0	NaN	9321	3541	12857
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12874	33.775	NaN	105660	30	0	39751	0.214	+			5216	ATTSVITIVK	10	113	516.8172140861253	1031.6198752390505	2	516.8193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATTSVITIVK_	ENSG00000198517|ENST00000343242|MAFK	99.01295224348159	0.08062808246117298	6				NaN	NaN	0	NaN	9328	3544	12873
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12875	33.779	NaN	29866	30	0	2238	0.106	+			10536	EWPTTDLH	8	90	499.73253088459325	997.4505088359865	2	499.7344055175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EWPTTDLH_	ENST00000229922.6_1_6:17393869-17426848:+|nuORF	42.47446043378293	0.6409579893742323	6				NaN	NaN	0	NaN	9329	3544	12873
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12876	33.781	NaN	21062	30	0	4568	0.106			+	47295	VNIVGDRP	8	86	435.24421829073043	868.4738836482609	2	435.2459716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VNIVGDRP_	REV__ENST00000529993.5_1_11:68154039-68171824:+|nuORF	45.97224482568171	0.6192535143389125	6				NaN	NaN	0	NaN	9330	3544	12873
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12877	33.782	NaN	16260	30	0	2223.9	0.106	+			35905	SEFKNITV	8	84	469.251079635377	936.487606337554	2	469.2533264160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SEFKNITV_	ENSG00000144028|ENST00000323853|SNRNP200	52.936696900407355	0.5717071646657654	6				NaN	NaN	0	NaN	9331	3544	12873
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12878	33.784	NaN	16996	30	0	1565.9	0.106	+			13042	GEVVKELSV	9	81	480.2728786702743	958.5312044073486	2	480.27484130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GEVVKELSV_	ENSG00000050405|ENST00000341247|LIMA1;nc|ENSG00000050405|Q9UHB6-2|LIMA1;nc|ENSG00000050405|Q9UHB6-3|LIMA1;nc|ENSG00000050405|Q9UHB6-4|LIMA1;nc|ENSG00000050405|Q9UHB6-5|LIMA1	101.45984612302182	0.0377122763612125	6				NaN	NaN	0	NaN	9332	3544	12873
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12879	33.786	NaN	8773.3	30	0	781.85	0.106			+	26273	LSTLGSKTSM	10	77	512.7699584960938	NaN	0	512.7699584960938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSTLGSKTSM_	REV__ANK2|p.E1746*|1|0.07|ENSG00000145362|chr4:113353848-113353849|-/C|frameshift_variant;REV__ANK2|p.N1476Mfs*12|1|0.21|ENSG00000145362|chr4:113350244-113350244|A/-|frameshift_variant;REV__ANK2|p.R2581Efs*5|1|0.41|ENSG00000145362|chr4:113356352-113356353|-/A|frameshift_variant;REV__ENSG00000145362|ENST00000357077|ANK2;REV__nc|ENSG00000145362|Q01484-2|ANK2;REV__nc|ENSG00000145362|Q01484-5|ANK2	64.20726635412375	0.1999210135493042	6				NaN	NaN	0	NaN	9333	3544	12873
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12880	33.788	NaN	8708.5	30	0	764.39	0.036			+	9671	ELTQQYKY	8	72	536.768277850398	1071.522002767596	2	536.7726440429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ELTQQYKY_	REV__ENSG00000091656|ENST00000651372|ZFHX4;REV__ENSG00000140836|ENST00000268489|ZFHX3;REV__ENST00000458716.2_1_8:77616323-77620415:+|nuORF;REV__nc|ENSG00000091656|Q86UP3-2|ZFHX4;REV__nc|ENSG00000091656|Q86UP3-3|ZFHX4;REV__nc|ENSG00000091656|Q86UP3-4|ZFHX4;REV__nc|ENSG00000091656|Q86UP3|ZFHX4;REV__ZFHX3|p.A3407Lfs*78|2|0.3|ENSG00000140836|chr16:72788061-72788061|G/-|frameshift_variant;REV__ZFHX3|p.D1894Qfs*34|1|0.05|ENSG00000140836|chr16:72797002-72797003|CC/-|frameshift_variant;REV__ZFHX3|p.H3611Tfs*83|1|0.4|ENSG00000140836|chr16:72787445-72787445|G/-|frameshift_variant;REV__ZFHX3|p.P2490Sfs*44|1|0.33|ENSG00000140836|chr16:72795215-72795216|-/G|frameshift_variant;REV__ZFHX3|p.P802Tfs*9|1|0.26|ENSG00000140836|chr16:72957742-72957743|-/T|frameshift_variant;REV__ZFHX3|p.S794Lfs*17|1|0.18|ENSG00000140836|chr16:72957766-72957767|-/G|frameshift_variant;REV__ZFHX3|p.T1213Qfs*31|1|0.24|ENSG00000140836|chr16:72811931-72811931|T/-|frameshift_variant;REV__ZFHX3|p.T3266Rfs*18|1|0.31|ENSG00000140836|chr16:72788481-72788481|G/-|frameshift_variant;REV__ZFHX4|p.D2246*|1|0.34|ENSG00000091656|chr8:76853650-76853651|-/T|frameshift_variant;REV__ZFHX4|p.H1565Tfs*5|1|0.28|ENSG00000091656|chr8:76851613-76851613|T/-|frameshift_variant;REV__ZFHX4|p.I2143Nfs*7|1|0.31|ENSG00000091656|chr8:76853343-76853344|-/A|frameshift_variant;REV__ZFHX4|p.K1442Nfs*10|1|0.18|ENSG00000091656|chr8:76851241-76851241|A/-|frameshift_variant;REV__ZFHX4|p.K1867Nfs*7|1|0.09|ENSG00000091656|chr8:76852518-76852518|A/-|frameshift_variant;REV__ZFHX4|p.L1719Cfs*6|1|0.13|ENSG00000091656|chr8:76852073-76852073|T/-|frameshift_variant;REV__ZFHX4|p.P2056Hfs*26|1|0.19|ENSG00000091656|chr8:76853081-76853084|CCTC/-|frameshift_variant;REV__ZFHX4|p.P2056Tfs*82|1|0.25|ENSG00000091656|chr8:76853079-76853083|CTCCT/-|frameshift_variant;REV__ZFHX4|p.P2057Hfs*26|2|0.17|ENSG00000091656|chr8:76853084-76853084|C/-|frameshift_variant;REV__ZFHX4|p.Q1674Afs*4|1|0.14|ENSG00000091656|chr8:76851934-76851935|-/A|frameshift_variant;REV__ZFHX4|p.R2647Gfs*44|1|0.25|ENSG00000091656|chr8:76854854-76854854|A/-|frameshift_variant;REV__ZFHX4|p.V1343Sfs*4|1|0.08|ENSG00000091656|chr8:76850945-76850946|-/A|frameshift_variant;REV__ZFHX4|p.Y3286Ifs*70|1|0.46|ENSG00000091656|chr8:76863562-76863563|-/G|frameshift_variant	45.9519527083369	0.6193794311207887	6				NaN	NaN	0	NaN	9334	3544	12873
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12891	33.809	NaN	52238	30	0	7468.6	0.199				-1	 	0	87	472.28090160325644	942.5472502733129	2	472.2820129394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9342	3547	12890
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12892	33.813	NaN	9082.6	30	0	834.91	0.106	+			9987	ERKKRLGPG	9	78	520.8201879404872	1039.6258229477744	2	520.8225708007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ERKKRLGPG_	ENSG00000105401|ENST00000222005|CDC37	27.882242232435846	0.5426732730940306	6				NaN	NaN	0	NaN	9343	3547	12890
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12893	33.815	NaN	9652.6	30	0	1055.8	0.035	+			11392	FLNLSSNPL	9	85	502.77418880448903	NaN	0	502.7737731933594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FLNLSSNPL_	ENSG00000154114|ENST00000683345|TBCEL	90.60085204095205	0.040385177724871185	6				NaN	NaN	0	NaN	9344	3547	12890
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12911	33.852	NaN	24948	30	0	4897.7	0.214			+	2044	AKSEAGLSLHT	11	85	557.2978136908754	1112.5810744485507	2	557.3007202148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AKSEAGLSLHT_	REV__ENSG00000173389|ENST00000310914|IQCF1;REV__nc|ENSG00000173389|Q8N6M8-2|IQCF1	72.87924865735499	0.21173632944124365	6				NaN	NaN	0	NaN	9359	3550	12910
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12912	33.856	NaN	31785	30	0	3350.3	0.106			+	34043	RSLSPRHHDS	10	92	596.3015899843507	1190.5886270355013	2	596.3040771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RSLSPRHHDS_	REV__ENSG00000069018|ENST00000513104|TRPC7	120.8684288430529	0.026103207050128037	6				NaN	NaN	0	NaN	9360	3550	12910
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12913	33.858	NaN	20047	30	0	2779.2	0.106				-1	 	0	88	511.28553256135723	1020.5565121895145	2	511.2874450683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9361	3550	12910
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12914	33.859	NaN	8263.3	30	0	339.01	0.106			+	-1	CHFEPQVCM	9	86	583.7260625302092	1165.4375721272183	2	583.728271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_CHFEPQVC(Carbamidomethyl (C))M(Oxidation (M))_	REV__ENSG00000186891|ENST00000379268|TNFRSF18;REV__nc|ENSG00000186891|Q9Y5U5-2|TNFRSF18;REV__nc|ENSG00000186891|Q9Y5U5-3|TNFRSF18	63.30626980617807	0.18605348971131092	6				NaN	NaN	0	NaN	9362	3550	12910
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12915	33.861	NaN	9616.9	30	0	2274.4	0.106	+			24451	LGFAFLRVLY	10	67	400.2384918365415	1197.6936461098246	3	400.2403869628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LGFAFLRVLY_	STEAP4|p.H304R|1|0.54|ENSG00000127954|chr7:88282714-88282714|T/C|missense_variant	24.519189625965996	0.6795976720565101	6				NaN	NaN	0	NaN	9363	3550	12910
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12916	33.863	NaN	6111.9	30	0	1204.5	0.038	+			43251	TEWLDGKHVV	10	73	395.20734949606356	1182.6002190883908	3	395.20849609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TEWLDGKHVV_	ENSG00000196262|ENST00000468812|PPIA;ENST00000414143.1_1_20:25348913-25349114:-|nuORF;ENST00000420099.1_1_13:91924337-91924628:-|nuORF;ENST00000424692.3_1_4:124983938-124984139:+|nuORF;ENST00000450588.1_1_20:36158731-36158923:+|nuORF;ENST00000454070.2_1_1:101736433-101736811:-|nuORF;ENST00000527147.1_1_11:100537243-100537690:+|nuORF;ENST00000557282.1_1_12:98984503-98984704:-|nuORF;ENST00000577627.1_1_18:5002795-5003119:-|nuORF;nc|ENSG00000196262|P62937-2|PPIA	35.15202426646627	0.5927656479315102	6				NaN	NaN	0	NaN	9364	3550	12910
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12917	33.864	NaN	9658.7	30	0	558.12	0.142	+			49453	VVVVFFVPCI	10	86	561.3255001940049	1120.6364474548097	2	561.3272094726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VVVVFFVPCI_	OR4C12|p.L247V|1|0.19|ENSG00000221954|chr11:49981763-49981763|A/C|missense_variant	39.252832667884924	0.5560298534376815	6				NaN	NaN	0	NaN	9365	3550	12910
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12935	33.902	NaN	436910	30	0	148890	0.135				-1	 	0	91	564.3352453156173	1126.6559376980344	2	564.3372802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9380	3553	12934
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12936	33.904	NaN	76724	30	0	17890	0.106				-1	 	0	99	522.7882419397398	1043.5619309462795	2	522.7899780273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9381	3553	12934
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12937	33.906	NaN	24431	30	0	6166.1	0.106				-1	EAWTMPFAF	9	85	558.2471249612091	1114.4796969892182	2	558.2490844726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_EAWTM(Oxidation (M))PFAF_	ENSG00000100024|ENST00000326010|UPB1	42.47446043378293	0.39123495718708534	6				NaN	NaN	0	NaN	9382	3553	12934
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12938	33.908	NaN	24485	30	0	15793	0.106	+			37326	SLEAGLARDL	10	59	348.8611755232005	1043.5616971698014	3	348.8621826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLEAGLARDL_	ENSG00000023171|ENST00000635736|GRAMD1B;GRAMD1B|p.W696Mfs*13|1|0.44|ENSG00000023171|chr11:123619177-123619178|-/A|frameshift_variant	26.69291269510374	0.6618461711292317	6				NaN	NaN	0	NaN	9383	3553	12934
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12939	33.91	NaN	30410	30	0	4354	0.106	+			17808	IEVENKEVL	9	91	536.7982964174905	NaN	0	536.79833984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IEVENKEVL_	ENSG00000173193|ENST00000474629|PARP14;nc|ENSG00000173193|Q460N5-1|PARP14;nc|ENSG00000173193|Q460N5-3|PARP14;nc|ENSG00000173193|Q460N5-4|PARP14;PARP14|p.N1416Efs*19|1|0.2|ENSG00000173193|chr3:122718388-122718389|-/A|frameshift_variant	122.93914200107957	0.0016770443082379867	6				NaN	NaN	0	NaN	9384	3553	12934
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12940	33.912	NaN	20246	30	0	2007.9	0.106				-1	 	0	92	481.80397256175837	961.5933921903168	2	481.8050537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9385	3553	12934
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12941	33.914	NaN	30696	30	0	12069	0.035			+	6874	CLHHLSSTM	9	86	514.7362883596528	1027.4580237861055	2	514.7378540039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_CLHHLSSTM_	REV__ENSG00000120498|ENST00000374333|TEX11;REV__nc|ENSG00000120498|Q8IYF3|TEX11	50.0245360154114	0.3026755932229825	6				NaN	NaN	0	NaN	9386	3553	12934
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12959	33.95	NaN	148420	30	0	22969	0.146			+	33621	RLSQSSETF	9	86	527.7622744098843	1053.5099958865685	2	527.7639770507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RLSQSSETF_	REV__HERV1_I-int_dup2|chr3:34679996-34686397:+|1.0948245018220069|0.0565463038051543|4.28|448.0|242|1|anti-sense	66.42927471994793	0.16001998865088202	6				NaN	NaN	0	NaN	9401	3556	12958
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12960	33.952	NaN	25627	30	0	9901.6	0.106	+			17993	IHSPFTTIL	9	91	514.7944200253569	NaN	0	514.7942504882812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IHSPFTTIL_	ENSG00000155026|ENST00000404406|RSPH10B;ENSG00000169402|ENST00000404077|RSPH10B2;nc|ENSG00000169402|B2RC85-2|RSPH10B2	52.936696900407355	0.1864545979552969	6				NaN	NaN	0	NaN	9402	3556	12958
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12961	33.954	NaN	23472	30	0	3030.6	0.106			+	24560	LGMECSKR	8	85	490.73635844343625	979.4581639536725	2	490.7374572753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LGMEC(Carbamidomethyl (C))SKR_	REV__ENSG00000178896|ENST00000316052|EXOSC4	53.351449002276354	0.5676011784961348	6				NaN	NaN	0	NaN	9403	3556	12958
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12962	33.956	NaN	21873	30	0	8748.4	0.106			+	8604	ECKFPKKRC	9	88	569.7964986862955	1137.578444439391	2	569.7982177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ECKFPKKRC_	REV__ENSG00000159882|ENST00000429154|ZNF230;REV__ENSG00000178386|ENST00000434772|ZNF223;REV__ENST00000585568.5_1_19:44513139-44515613:+|nuORF	94.00642277110589	0.05356993013874309	6				NaN	NaN	0	NaN	9404	3556	12958
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12963	33.958	NaN	171310	30	0	28131	0.106	+			36049	SEISNIARV	9	122	494.7732707781444	987.5319886230889	2	494.77435302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SEISNIARV_	ENSG00000016490|ENST00000394711|CLCA1	167.22876102047192	0.0032399547248545047	6				NaN	NaN	0	NaN	9405	3556	12958
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12964	33.959	NaN	31381	30	0	7398.9	0.106				-1	 	0	99	519.2958962133932	1036.5772394935864	2	519.297607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9406	3556	12958
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12965	33.961	NaN	17996	30	0	1606.8	0.038			+	27472	MLRNHASPVM	10	91	594.2890608763495	1186.5635688194989	2	594.2919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Oxidation (M)	_M(Oxidation (M))LRNHASPVM(Oxidation (M))_	REV__ENSG00000166246|ENST00000299320|DNAAF8;REV__ENST00000586256.1_1_16:4784633-4796526:+|nuORF	60.11826168202944	0.36476464221954025	6				NaN	NaN	0	NaN	9407	3556	12958
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12966	33.962	NaN	9701.6	30	0	1823.7	0.141				-1	 	0	73	421.75147000208045	841.4883870709609	2	421.7525939941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9408	3556	12958
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12984	33.999	NaN	110330	30	0	31274	0.151				-1	 	0	90	537.3118852006916	1072.609217468183	2	537.3136596679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9423	3559	12983
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12985	34.001	NaN	40556	30	0	6047.1	0.106	+			32872	RDFTVSAM	8	78	463.7232874384711	NaN	0	463.723388671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RDFTVSAM_	ENSG00000161960|ENST00000293831|EIF4A1;ENST00000578324.5_1_17:7477602-7481249:+|nuORF;ENST00000581544.5_1_17:7477924-7481249:+|nuORF;ENST00000581621.1_1_17:7476159-7481249:+|nuORF;nc|ENSG00000161960|P60842-2|EIF4A1	68.78682469695295	1.7418937515398478	6				NaN	NaN	0	NaN	9424	3559	12983
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12986	34.003	NaN	27915	30	0	4677.3	0.106				-1	 	0	103	383.57138179864717	1147.6923159961416	3	383.5727233886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9425	3559	12983
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12987	34.005	NaN	23984	30	0	2000	0.106	+			10942	FDTLKEMVI	9	91	548.2923586082494	1094.5701642832987	2	548.2952880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FDTLKEMVI_	ENSG00000173193|ENST00000474629|PARP14;nc|ENSG00000173193|Q460N5-1|PARP14;nc|ENSG00000173193|Q460N5-3|PARP14;nc|ENSG00000173193|Q460N5-4|PARP14;PARP14|p.N1416Efs*19|1|0.2|ENSG00000173193|chr3:122718388-122718389|-/A|frameshift_variant	58.78195531508484	0.22376836668196862	6				NaN	NaN	0	NaN	9426	3559	12983
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12988	34.007	NaN	33987	30	0	11422	0.106				-1	 	0	90	329.21727884547073	984.6300071366122	3	329.21826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9427	3559	12983
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12989	34.009	NaN	17993	30	0	3075.9	0.106			+	30357	PVDWLRPCLA	10	79	585.3100710255859	1168.6055891179717	2	585.3118896484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PVDWLRPCLA_	REV__ENSG00000182378|ENST00000381657|PLCXD1;REV__ENST00000484611.7_1_X:200851-207455:+|nuORF	37.15910966729921	0.575322462179216	6				NaN	NaN	0	NaN	9428	3559	12983
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	12990	34.01	NaN	10410	30	0	1842.7	0.035	+			36231	SELYIRKV	8	70	336.5344378546052	NaN	0	336.5343322753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SELYIRKV_	tr|U7SJM2|U7SJM2_FUSNUFerrousirontransporterAOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02107PE=4SV=1	26.79610172149135	1.7418937515398478	6				NaN	NaN	0	NaN	9429	3559	12983
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13008	34.046	NaN	44076	30	0	5570.1	0.214	+			29187	NVIRDAVTY	9	90	525.7809165169804	1049.5472801007606	2	525.7825317382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NVIRDAVTY_	ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2	80.45461616416974	0.09558281504443908	6				NaN	NaN	0	NaN	9444	3562	13007
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13009	34.05	NaN	38624	30	0	5696.4	0.106	+			22887	KVLREQEK	8	100	515.3064911567417	1028.5984293802833	2	515.3080444335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVLREQEK_	ENSG00000170325|ENST00000360871|PRDM10;nc|ENSG00000170325|Q9NQV6-1|PRDM10;nc|ENSG00000170325|Q9NQV6-2|PRDM10;nc|ENSG00000170325|Q9NQV6-5|PRDM10;nc|ENSG00000170325|Q9NQV6-6|PRDM10;nc|ENSG00000170325|Q9NQV6-7|PRDM10;nc|ENSG00000170325|Q9NQV6|PRDM10	107.00750918261382	0.24681273948614665	6				NaN	NaN	0	NaN	9445	3562	13007
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13010	34.052	NaN	41367	30	0	3560	0.106			+	-1	TWRGTVTHM	9	91	552.7665544461408	1103.5185559590816	2	552.7684326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_TWRGTVTHM(Oxidation (M))_	REV__HTR1B|p.Y109H|1|0.28|ENSG00000135312|chr6:77463079-77463079|A/G|missense_variant	76.7741389293348	0.11149722112137898	6				NaN	NaN	0	NaN	9446	3562	13007
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13011	34.054	NaN	60873	30	0	14249	0.106	+			13492	GLLSDRKKV	9	100	508.3169568612491	1014.6193607892982	2	508.3182373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GLLSDRKKV_	ENSG00000167986|ENST00000301764|DDB1	90.36981228632155	0.0638227155548745	6				NaN	NaN	0	NaN	9447	3562	13007
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13012	34.056	NaN	23884	30	0	2291.1	0.106	+			43871	TMIGMEHPK	9	104	538.2490751791051	1074.4835974250102	2	538.2506103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Oxidation (M)	_TM(Oxidation (M))IGM(Oxidation (M))EHPK_	ENSG00000173950|ENST00000310380|XXYLT1;ENST00000473200.1_1_3:194790446-194874713:-|nuORF;nc|ENSG00000173950|Q8NBI6-2|XXYLT1;nc|ENSG00000173950|Q8NBI6-3|XXYLT1	54.776311868738084	0.25715957988447635	6				NaN	NaN	0	NaN	9448	3562	13007
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13013	34.057	NaN	13775	30	0	5130.6	0.106			+	-1	DPFMVLVL	8	79	475.2572613915756	948.4999698499512	2	475.25823974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_DPFM(Oxidation (M))VLVL_	REV__PKHD1|p.F1531Lfs*61|1|0.39|ENSG00000170927|chr6:52025217-52025217|A/-|frameshift_variant;REV__PKHD1|p.P1545Qfs*47|1|0.37|ENSG00000170927|chr6:52025176-52025176|G/-|frameshift_variant	33.51558372728122	0.7005509609380386	6				NaN	NaN	0	NaN	9449	3562	13007
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13014	34.059	NaN	7036.1	30	0	1660.1	0.033	+			23785	LCLPESLP	8	66	436.23377829866695	870.4530036641339	2	436.2348327636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LCLPESLP_	ENSG00000197548|ENST00000693202|ATG7;ENST00000264276.10_1_2:202566016-202566163:-|nuORF;nc|ENSG00000197548|O95352-2|ATG7	46.76643321282427	0.6143254112625767	6				NaN	NaN	0	NaN	9450	3562	13007
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13032	34.096	NaN	300150	30	0	63113	0.162				-1	 	0	90	450.7491388264134	899.4837247196268	2	450.7503356933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9465	3565	13031
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13033	34.098	NaN	96447	30	0	29748	0.106				-1	 	0	90	500.26491407795436	998.5152752227087	2	500.2663269042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9466	3565	13031
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13034	34.1	NaN	70200	30	0	9816	0.106			+	26094	LSNFEERF	8	105	521.2534332286097	1040.4923135240192	2	521.2554931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSNFEERF_	REV__ENSG00000132334|ENST00000254667|PTPRE;REV__nc|ENSG00000132334|P23469-2|PTPRE;REV__nc|ENSG00000132334|P23469-3|PTPRE	53.351449002276354	0.5676011784961348	6				NaN	NaN	0	NaN	9467	3565	13031
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13035	34.102	NaN	46500	30	0	10633	0.106				-1	 	0	94	542.3224995576752	1082.6304461821503	2	542.3243408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9468	3565	13031
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13036	34.104	NaN	26123	30	0	4983.1	0.106	+			18624	ISSSQVRDGG	10	85	503.25220298409874	1004.4898530349975	2	503.2535400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ISSSQVRDGG_	DSCAM|p.G1997Afs*3|1|0.1|ENSG00000171587|chr21:40013083-40013083|C/-|frameshift_variant;DSCAM|p.P886Qfs*57|1|0.25|ENSG00000171587|chr21:40187253-40187253|G/-|frameshift_variant;ENSG00000171587|ENST00000400454|DSCAM;nc|ENSG00000171587|O60469-2|DSCAM	52.936696900407355	0.4300801048568001	6				NaN	NaN	0	NaN	9469	3565	13031
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13037	34.106	NaN	21740	30	0	13861	0.106			+	17920	IGKARSLATV	10	64	339.21372682883646	1014.6193510867095	3	339.2147521972656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IGKARSLATV_	REV__ENST00000551964.5_2_12:99039092-99039173:+|nuORF	40.05817265558897	0.5486090488315611	6				NaN	NaN	0	NaN	9470	3565	13031
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13038	34.108	NaN	27626	30	0	3386.9	0.034				-1	 	0	83	473.2649153811033	944.5152778290067	2	473.265869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9471	3565	13031
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13056	34.144	NaN	731510	30	0	80476	0.144			+	10156	ESSSSSKLKR	10	117	554.8012192709865	1107.587885608773	2	554.8035888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ESSSSSKLKR_	REV__ENSG00000102010|ENST00000348343|BMX	85.16082228582465	0.15877915086237185	6				NaN	NaN	0	NaN	9486	3568	13055
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13057	34.146	NaN	20928	30	0	1806.2	0.106			+	44745	TTMIKQLCET	10	90	612.8021755245786	1223.5897981159571	2	612.8040161132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_TTMIKQLC(Carbamidomethyl (C))ET_	REV__ENSG00000178038|ENST00000318962|ALS2CL;REV__ENST00000383742.7_2_3:46712476-46718839:-|nuORF;REV__ENST00000434140.5_2_3:46712476-46717187:-|nuORF;REV__ENST00000473484.1_1_3:46713038-46716081:-|nuORF;REV__ENST00000486301.5_1_3:46712476-46716264:-|nuORF;REV__ENST00000498817.5_1_3:46713372-46716156:-|nuORF;REV__nc|ENSG00000178038|Q60I27-2|ALS2CL;REV__nc|ENSG00000178038|Q60I27-3|ALS2CL;REV__nc|ENSG00000178038|Q60I27-4|ALS2CL;REV__nc|ENSG00000178038|Q60I27-5|ALS2CL;REV__nc|ENSG00000178038|Q60I27-6|ALS2CL	88.17693792209575	0.14151128060301246	6				NaN	NaN	0	NaN	9487	3568	13055
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13058	34.149	NaN	20404	30	0	1448.7	0.106	+			829	AEGEIYTKL	9	96	512.2721876204922	NaN	0	512.2720947265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEGEIYTKL_	ENSG00000138190|ENST00000260762|EXOC6;EXOC6|p.L640Ffs*39|1|0.37|ENSG00000138190|chr10:92974192-92974193|-/T|frameshift_variant;nc|ENSG00000138190|Q8TAG9-2|EXOC6	76.16968421966216	0.08450868013726211	6				NaN	NaN	0	NaN	9488	3568	13055
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13059	34.15	NaN	14019	30	0	1949.5	0.106				-1	IFLEMGFTEM	10	80	625.2778982140208	1248.5412434948414	2	625.27978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Oxidation (M)	_IFLEM(Oxidation (M))GFTEM(Oxidation (M))_	ENSG00000179115|ENST00000314606|FARSA;nc|ENSG00000179115|Q9Y285-2|FARSA	40.77816245573522	0.5419747034533848	6				NaN	NaN	0	NaN	9489	3568	13055
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13060	34.152	NaN	9652.8	30	0	3314.3	0.106	+			47165	VLSRARKR	8	71	329.21727884547073	984.6300071366122	3	329.2183532714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VLSRARKR_	ENST00000583087.5_1_3:123339167-123339366:-|nuORF	33.51558372728122	0.7005509609380386	6				NaN	NaN	0	NaN	9490	3568	13055
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13061	34.154	NaN	5906.2	30	0	585.47	0.106	+			23779	LCLKWLPS	8	74	480.2728786702743	958.5312044073486	2	480.2738952636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LCLKWLPS_	ENST00000297578.8_1_8:104412404-104412587:-|nuORF	53.351449002276354	0.5676011784961348	6				NaN	NaN	0	NaN	9491	3568	13055
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13062	34.156	NaN	12120	30	0	1908.1	0.034				-1	 	0	83	454.2645747856825	906.514596638165	2	454.2659912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9492	3568	13055
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13080	34.19	NaN	106760	30	0	16950	0.181				-1	 	0	93	501.28338450092906	1000.5522160686581	2	501.2847900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9507	3571	13079
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13081	34.193	NaN	114140	30	0	17648	0.106			+	20766	KHKTKHKK	8	115	517.8324699830562	1033.6503870329122	2	517.8341064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KHKTKHKK_	REV__ANKRD11|p.D1104Mfs*214|1|0.28|ENSG00000167522|chr16:89283233-89283233|T/-|frameshift_variant;REV__ANKRD11|p.E1199Rfs*119|1|0.34|ENSG00000167522|chr16:89282948-89282948|T/-|frameshift_variant;REV__ANKRD11|p.I1115Tfs*203|1|0.24|ENSG00000167522|chr16:89283198-89283198|A/-|frameshift_variant;REV__ENSG00000167522|ENST00000301030|ANKRD11;REV__ENST00000330736.9_1_16:89334888-89371640:-|nuORF	58.22992032128504	0.519305013932957	6				NaN	NaN	0	NaN	9508	3571	13079
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13082	34.195	NaN	49540	30	0	7716.2	0.106	+			2648	AQLGACTRPV	10	98	508.27280794745786	1014.5310629617157	2	508.2748718261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AQLGACTRPV_	nc|ENSG00000105327|Q96PG8-1|BBC3;nc|ENSG00000105327|Q96PG8|BBC3	56.43379154798735	0.3982744522255666	6				NaN	NaN	0	NaN	9509	3571	13079
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13083	34.197	NaN	49279	30	0	3973	0.106				-1	 	0	101	531.8070335506477	1061.5995141680953	2	531.8086547851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9510	3571	13079
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13084	34.199	NaN	35695	30	0	7073.9	0.106			+	9378	EKDQKEKLK	9	88	573.3286269730863	1144.6427010129726	2	573.3300170898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EKDQKEKLK_	REV__ENSG00000148513|ENST00000361713|ANKRD30A;REV__ENSG00000180777|ENST00000690538|ANKRD30B;REV__nc|ENSG00000180777|Q9BXX2|ANKRD30B	127.46168284122857	0.016682644177004526	6				NaN	NaN	0	NaN	9511	3571	13079
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13085	34.2	NaN	11824	30	0	1985.1	0.106			+	33614	RLRRGGAG	8	73	421.7559180546761	841.4972831761522	2	421.7578430175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RLRRGGAG_	REV__CDAN1|p.T563Pfs*29|1|0.16|ENSG00000140326|chr15:42731673-42731673|G/-|frameshift_variant;REV__ENSG00000140326|ENST00000356231|CDAN1;REV__nc|ENSG00000140326|Q8IWY9-1|CDAN1	26.79610172149135	0.7524337208463756	6				NaN	NaN	0	NaN	9512	3571	13079
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13086	34.202	NaN	19642	30	0	4626	0.033				-1	 	0	73	443.27243192396804	884.5303109147361	2	443.2735290527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9513	3571	13079
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13104	34.238	NaN	19513	30	0	2623.1	0.214	+			2290	AMACLAWRL	9	93	538.772210330705	1075.5298677282099	2	538.7741088867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))AMACLAWRL_	ECI2|p.Y5C|1|0.27|ENSG00000198721|chr6:4135547-4135547|T/C|missense_variant	57.81127852772723	0.2318599694398087	6				NaN	NaN	0	NaN	9528	3574	13103
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13105	34.242	NaN	13627	30	0	1690.3	0.106				-1	 	0	78	428.7593248166008	855.5040967000016	2	428.7603759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9529	3574	13103
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13106	34.244	NaN	9582.7	30	0	964.52	0.106	+			5232	ATVAAILQH	9	75	462.2687263576182	NaN	0	462.2686767578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATVAAILQH_	ENSG00000183340|ENST00000332349|JRKL;JRKL|p.D446Gfs*26|1|0.07|ENSG00000183340|chr11:96391985-96391986|-/GTTTTACT|frameshift_variant	161.89823264540465	0.012157693564727847	6				NaN	NaN	0	NaN	9530	3574	13103
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13107	34.246	NaN	9596.8	30	0	5824.1	0.106			+	-1	KGIMGLALML	10	55	354.8735400909491	1061.5987908730474	3	354.87469482421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_KGIM(Oxidation (M))GLALML_	REV__ENSG00000089057|ENST00000338244|SLC23A2;REV__nc|ENSG00000089057|Q9UGH3-2|SLC23A2	23.52269567125451	0.6877354443478558	6				NaN	NaN	0	NaN	9531	3574	13103
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13108	34.248	NaN	6394.5	30	0	930.69	0.106				-1	 	0	71	447.2568123813512	892.4990718295024	2	447.25811767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9532	3574	13103
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13109	34.249	NaN	6751.6	30	0	540.27	0.036			+	9816	EPGEYVIKR	9	87	545.7959528426152	1089.5773527520303	2	545.79931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EPGEYVIKR_	REV__ENSG00000123384|ENST00000243077|LRP1;REV__LRP1|p.D1283Ifs*50|1|0.09|ENSG00000123384|chr12:57175962-57175962|G/-|frameshift_variant;REV__LRP1|p.D1366Rfs*54|1|0.17|ENSG00000123384|chr12:57177143-57177144|-/CA|frameshift_variant;REV__LRP1|p.N939Tfs*41|2|0.2|ENSG00000123384|chr12:57166940-57166940|C/-|frameshift_variant;REV__LRP1|p.R3469Gfs*24|2|0.38|ENSG00000123384|chr12:57201552-57201552|C/-|frameshift_variant	60.11826168202944	0.21262886028301267	6				NaN	NaN	0	NaN	9533	3574	13103
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13110	34.25	NaN	7786.9	30	0	526.74	0.141	+			31651	QMVNRIVDSA	10	73	566.7931165583609	NaN	0	566.7930908203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QMVNRIVDSA_	RCL1|p.A205V|1|0.22|ENSG00000120158|chr9:4841261-4841261|C/T|missense_variant	58.78195531508484	0.24422493511477816	6				NaN	NaN	0	NaN	9534	3574	13103
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13128	34.288	NaN	159970	30	0	50963	0.154				-1	 	0	87	564.3352453156173	1126.6559376980344	2	564.337158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9549	3577	13127
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13129	34.29	NaN	23310	30	0	2090.1	0.106	+			46284	VEIAEKNVL	9	102	507.79500267938465	NaN	0	507.7950134277344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VEIAEKNVL_	AKAP9|p.Q3083Nfs*28|1|0.15|ENSG00000127914|chr7:92089389-92089390|-/TGAATATCAAGCAGCTATGGAATGCC|frameshift_variant;ENSG00000127914|ENST00000356239|AKAP9;nc|ENSG00000127914|Q99996-1|AKAP9;nc|ENSG00000127914|Q99996-3|AKAP9;nc|ENSG00000127914|Q99996-5|AKAP9;nc|ENSG00000127914|Q99996-6|AKAP9	72.87924865735499	0.09578366712754152	6				NaN	NaN	0	NaN	9550	3577	13127
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13130	34.293	NaN	8242.6	30	0	900.5	0.106	+			46262	VEGVAKNNN	9	81	472.7438435755782	943.4731342179564	2	472.7451477050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VEGVAKNNN_	COBLL1|p.L945Cfs*12|1|0.35|ENSG00000082438|chr2:164694786-164694786|A/-|frameshift_variant;ENSG00000082438|ENST00000652658|COBLL1;nc|ENSG00000082438|Q53SF7-2|COBLL1;nc|ENSG00000082438|Q53SF7-3|COBLL1	42.396135135203025	0.392153681582562	6				NaN	NaN	0	NaN	9551	3577	13127
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13131	34.294	NaN	14879	30	0	3624.2	0.106				-1	 	0	69	458.27782134622987	914.5410897592598	2	458.2789306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9552	3577	13127
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13132	34.296	NaN	10451	30	0	1626.5	0.106			+	46494	VETVLGLIQ	9	78	486.29115233994594	970.5677517466919	2	486.2922668457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VETVLGLIQ_	REV__ENSG00000157600|ENST00000372068|TMEM164;REV__nc|ENSG00000157600|Q5U3C3-2|TMEM164	127.46168284122857	0.016682644177004526	6				NaN	NaN	0	NaN	9553	3577	13127
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13133	34.298	NaN	11107	30	0	2831.9	0.106			+	-1	CMQNSIVTF	9	87	558.2471249612091	1114.4796969892182	2	558.2494506835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C),Oxidation (M)	_C(Carbamidomethyl (C))M(Oxidation (M))QNSIVTF_	REV__ENSG00000166147|ENST00000316623|FBN1	37.15910966729921	0.4535818937225704	6				NaN	NaN	0	NaN	9554	3577	13127
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13134	34.3	NaN	7196.1	30	0	721.39	0.036			+	28669	NLSGIPIWGI	10	81	535.3040852736854	1068.5936176141706	2	535.3074340820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NLSGIPIWGI_	REV__NEB|p.D1212N|1|0.3|ENSG00000183091|chr2:151677705-151677705|C/T|missense_variant	54.776311868738084	0.41334902933431344	6				NaN	NaN	0	NaN	9555	3577	13127
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13152	34.337	NaN	164690	30	0	38477	0.214	+			43428	TGKSTKTAQ	9	82	461.25418118631836	920.4938094394367	2	461.2554016113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TGKSTKTAQ_	ENSG00000080608|ENST00000397885|PUM3	101.60071028292904	0.0375685401170269	6				NaN	NaN	0	NaN	9570	3580	13151
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13153	34.341	NaN	29681	30	0	7890.7	0.106	+			48655	VTSRRQPR	8	97	500.29371941328515	998.5728858933703	2	500.295166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTSRRQPR_	CEP250|p.E698Hfs*36|1|0.27|ENSG00000126001|chr20:35478094-35478097|TAAG/-|frameshift_variant	45.9519527083369	0.6193794311207887	6				NaN	NaN	0	NaN	9571	3580	13151
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13154	34.343	NaN	32641	30	0	4558.1	0.106				-1	MDLGWLALL	9	105	524.279020981124	1046.5434890290478	2	524.2828979492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))DLGWLALL_	ENST00000475470.1_1_3:9882101-9883869:-|nuORF	65.80317337860623	0.1652391959156183	6				NaN	NaN	0	NaN	9572	3580	13151
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13155	34.345	NaN	21644	30	0	4327.8	0.106	+			50374	WWMKGSTPTQ	10	85	619.2869542751105	1236.5593556170209	2	619.2890014648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_WWM(Oxidation (M))KGSTPTQ_	ENSG00000005810|ENST00000544440|MYCBP2;MYCBP2|p.T4311Pfs*37|1|0.14|ENSG00000005810|chr13:77059619-77059619|G/-|frameshift_variant;nc|ENSG00000005810|O75592-2|MYCBP2	69.6276240434122	0.2803623802747859	6				NaN	NaN	0	NaN	9573	3580	13151
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13156	34.347	NaN	24709	30	0	1693.6	0.106	+			51536	YWQNHPEL	8	95	543.7539853602859	NaN	0	543.754150390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YWQNHPEL_	ENSG00000119203|ENST00000238112|CPSF3	84.9155231211612	1.7418937515398478	6				NaN	NaN	0	NaN	9574	3580	13151
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13157	34.348	NaN	20216	30	0	1743.3	0.035	+			36050	SEISNIARV	9	90	494.7732707781444	987.5319886230889	2	494.7745666503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SEISNIARV_	ENSG00000016490|ENST00000394711|CLCA1	88.17693792209575	0.07000514020414955	6				NaN	NaN	0	NaN	9575	3580	13151
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13158	34.349	NaN	32511	30	0	6399.2	0.143				-1	 	0	104	329.21727884547073	984.6300071366122	3	329.2194519042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9576	3580	13151
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13176	34.387	NaN	155150	30	0	52740	0.155			+	20973	KKEPPGKLKE	10	98	385.23623538537674	1152.6868767563303	3	385.23748779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KKEPPGKLKE_	REV__ENSG00000122728|ENST00000242310|TAF1L;REV__ENSG00000147133|ENST00000423759|TAF1;REV__nc|ENSG00000147133|P21675-1|TAF1;REV__nc|ENSG00000147133|P21675-13|TAF1;REV__nc|ENSG00000147133|P21675-15|TAF1;REV__nc|ENSG00000147133|P21675-16|TAF1;REV__nc|ENSG00000147133|P21675-17|TAF1;REV__nc|ENSG00000147133|P21675-18|TAF1;REV__nc|ENSG00000147133|P21675-19|TAF1;REV__nc|ENSG00000147133|P21675-20|TAF1;REV__nc|ENSG00000147133|P21675-21|TAF1;REV__nc|ENSG00000147133|P21675-22|TAF1;REV__nc|ENSG00000147133|P21675-23|TAF1;REV__nc|ENSG00000147133|P21675-24|TAF1;REV__nc|ENSG00000147133|P21675-25|TAF1;REV__nc|ENSG00000147133|P21675|TAF1;REV__TAF1|p.L1451Cfs*4|1|0.04|ENSG00000147133|chrX:71408121-71408125|CTAAT/-|frameshift_variant	33.921630207806714	0.6028135429846169	6				NaN	NaN	0	NaN	9591	3583	13175
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13177	34.389	NaN	56938	30	0	4006.3	0.106	+			41668	SVRPPRPKK	9	111	532.8379884557412	1063.6614239782823	2	532.8397216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVRPPRPKK_	ENSG00000128563|ENST00000397912|PRKRIP1;PRKRIP1|p.K25Rfs*15|1|0.31|ENSG00000128563|chr7:102396480-102396480|C/-|frameshift_variant	58.2462437865262	0.22823408064396822	6				NaN	NaN	0	NaN	9592	3583	13175
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13178	34.391	NaN	42616	30	0	23126	0.106			+	23709	LAVCPLWAL	9	92	493.2805245186087	984.5464961040174	2	493.2817687988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LAVCPLWAL_	REV__F2|p.L15Wfs*106|1|0.16|ENSG00000180210|chr11:46719276-46719276|C/-|frameshift_variant	72.61992398637584	0.12946007194610515	6				NaN	NaN	0	NaN	9593	3583	13175
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13179	34.393	NaN	29806	30	0	2404.1	0.106	+			18250	IPALRVVEEK	10	88	577.3511114282193	1152.6876699232384	2	577.3531494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IPALRVVEEK_	ENSG00000174720|ENST00000344442|LARP7;LARP7|p.T405Qfs*5|2|0.48|ENSG00000174720|chr4:112649598-112649598|A/-|frameshift_variant;nc|ENSG00000174720|Q4G0J3-3|LARP7	61.76455937419982	0.3497917639301274	6				NaN	NaN	0	NaN	9594	3583	13175
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13180	34.395	NaN	10247	30	0	1179.5	0.106			+	36236	SEMKCALRLRE	11	90	668.3470408779443	1334.6795288226886	2	668.3489379882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SEMKCALRLRE_	REV__ENST00000604957.1_2_X:101857073-101857160:+|nuORF	59.93077597824379	0.32407304095777845	6				NaN	NaN	0	NaN	9595	3583	13175
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13181	34.397	NaN	18901	30	0	4823.4	0.106	+			49761	VYPSSLSKI	9	69	497.28301741187477	992.5514818905496	2	497.2842712402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VYPSSLSKI_	ENSG00000111530|ENST00000545606|CAND1;nc|ENSG00000111530|Q86VP6-2|CAND1	63.53385203322761	0.18415635464017938	6				NaN	NaN	0	NaN	9596	3583	13175
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13182	34.399	NaN	7325.5	30	0	1401.3	0.03				-1	 	0	57	341.7149088125378	681.4152646918756	2	341.71588134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9597	3583	13175
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13200	34.436	NaN	39633	30	0	5402.7	0.214	+			21858	KRKRQATY	8	106	525.811817171186	1049.609081409172	2	525.8135375976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KRKRQATY_	ENST00000321341.10_2_18:48405602-48434530:+|nuORF	47.657333605630114	0.6087971902037268	6				NaN	NaN	0	NaN	9612	3586	13199
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13201	34.44	NaN	15729	30	0	1590.2	0.106	+			41145	SVIVQPFSK	9	92	502.7902439212016	1003.5659349092032	2	502.79205322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVIVQPFSK_	ENSG00000137871|ENST00000267807|ZNF280D;nc|ENSG00000285253|Q6N043-2|ZNF280D;nc|ENSG00000285253|Q6N043-3|ZNF280D;nc|ENSG00000285253|Q6N043-6|ZNF280D	48.601550744091256	0.3193666407755445	6				NaN	NaN	0	NaN	9613	3586	13199
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13202	34.442	NaN	17856	30	0	2938.1	0.106	+			32870	RDERATLLN	9	96	544.296582995908	1086.578613058616	2	544.2984008789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RDERATLLN_	ENSG00000104067|ENST00000614355|TJP1;nc|ENSG00000104067|Q07157-2|TJP1;nc|ENSG00000104067|Q07157|TJP1	42.86426827375447	0.38666266728046506	6				NaN	NaN	0	NaN	9614	3586	13199
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13203	34.444	NaN	13608	30	0	1955.3	0.106			+	18106	IKWEEVHCE	9	84	586.7743014535665	1171.534049973933	2	587.2802124023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IKWEEVHCE_	REV__ENST00000607391.5_1_6:159462930-159463077:+|nuORF	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	9615	3586	13199
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13204	34.445	NaN	7080.8	30	0	1190.6	0.106	+			2115	ALGSPLSLHL	10	59	336.5344378546052	NaN	0	336.5342102050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ALGSPLSLHL_	ENST00000590650.1_1_19:36236110-36236248:-|nuORF	23.04248740728303	0.42010282974921537	6				NaN	NaN	0	NaN	9616	3586	13199
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13205	34.447	NaN	16976	30	0	2511.5	0.036	+			8163	EAAKQQRKE	9	89	544.296582995908	1086.578613058616	2	544.7999877929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EAAKQQRKE_	ENSG00000158528|ENST00000433360|PPP1R9A;nc|ENSG00000158528|Q9ULJ8-4|PPP1R9A;nc|ENSG00000158528|Q9ULJ8-5|PPP1R9A;nc|ENSG00000158528|Q9ULJ8|PPP1R9A;PPP1R9A|p.F369*|1|0.04|ENSG00000158528|chr7:94911219-94911244|TCACCTCTCCTGATGCTTCTGCATCC/-|frameshift_variant;PPP1R9A|p.K495Nfs*3|2|0.28|ENSG00000158528|chr7:95111344-95111344|A/-|frameshift_variant;PPP1R9A|p.K592Nfs*5|1|0.07|ENSG00000158528|chr7:95198366-95198366|A/-|frameshift_variant;PPP1R9A|p.T716Nfs*11|1|0.27|ENSG00000158528|chr7:95250065-95250066|-/A|frameshift_variant	75.04331003522576	0.118981335847003	6				NaN	NaN	0	NaN	9617	3586	13199
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13206	34.448	NaN	5596.7	30	0	586.69	0.139	+			28694	NMVTTEVI	8	73	453.7331513572698	905.4517497813396	2	453.73162841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NMVTTEVI_	ENSG00000140543|ENST00000268148|DET1;nc|ENSG00000173867|Q7L5Y6-2|DET1	44.116797842482775	0.6307669463330267	6				NaN	NaN	0	NaN	9618	3586	13199
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13222	34.483	NaN	69584	30	0	15563	0.214			+	16648	HHVRLNSK	8	87	495.7830363188605	989.5515197045211	2	495.7843933105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HHVRLNSK_	REV__ENSG00000196597|ENST00000481138|ZNF782	71.29570347882199	0.39610197767395533	6				NaN	NaN	0	NaN	9631	3589	13221
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13223	34.486	NaN	19850	30	0	2392.5	0.106	+			23410	LAAPGAFQAQ	10	78	487.2574959108811	972.5004388885623	2	487.2584228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LAAPGAFQAQ_	ENST00000505443.1_1_5:3531983-3536103:-|nuORF	51.33545320467046	0.4446945571623749	6				NaN	NaN	0	NaN	9632	3589	13221
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13224	34.488	NaN	16626	30	0	2661.7	0.106			+	25992	LSKGRRAA	8	84	429.7659103337643	857.5172677343286	2	429.7680358886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSKGRRAA_	REV__ENST00000582668.1_1_17:73267497-73269738:+|nuORF;REV__ENST00000585075.1_1_17:73267491-73267800:+|nuORF	45.9519527083369	0.6193794311207887	6				NaN	NaN	0	NaN	9633	3589	13221
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13225	34.49	NaN	16665	30	0	3001.8	0.106	+			13574	GLTQREIDR	9	84	544.296582995908	1086.578613058616	2	544.2985229492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GLTQREIDR_	ARHGEF11|p.P1384Lfs*41|1|0.34|ENSG00000132694|chr1:156937418-156937418|G/-|frameshift_variant;ENSG00000132694|ENST00000368194|ARHGEF11;nc|ENSG00000132694|O15085|ARHGEF11	36.446750945000026	0.4619375763483977	6				NaN	NaN	0	NaN	9634	3589	13221
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13226	34.492	NaN	34271	30	0	5593.2	0.106	+			10542	EWWPKQGDS	9	83	566.7566873681689	1131.4988218031376	2	566.75830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EWWPKQGDS_	ENST00000581618.1_1_17:65362606-65362693:-|nuORF	54.722347961057174	0.257609425301511	6				NaN	NaN	0	NaN	9635	3589	13221
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13227	34.494	NaN	11046	30	0	1556.4	0.035			+	10342	ETTNAIKIQ	9	76	509.28119065403547	1016.547828374871	2	509.2823181152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ETTNAIKIQ_	REV__PCBP3|p.A332T|1|0.14|ENSG00000183570|chr21:45940114-45940114|G/A|missense_variant	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	9636	3589	13221
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13228	34.494	NaN	6654.9	30	0	1880.9	0.144	+			4433	ATIHALHFL	9	57	341.53086905392655	1021.5707777619797	3	341.5319519042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ATIHALHFL_	ENSG00000143811|ENST00000343818|PYCR2	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	9637	3589	13221
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13245	34.531	NaN	41001	30	0	3518.9	0.214				-1	 	0	97	504.2727893704672	1006.5310258077344	2	504.2740478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9651	3592	13244
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13246	34.535	NaN	40300	30	0	5370.1	0.106	+			50830	YETEGIRGL	9	106	519.2676209258046	NaN	0	519.2671508789062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YETEGIRGL_	ENSG00000076003|ENST00000264156|MCM6;MCM6|p.K365Nfs*6|1|0.23|ENSG00000076003|chr2:135862732-135862732|T/-|frameshift_variant;MCM6|p.R771Efs*3|1|0.33|ENSG00000076003|chr2:135844583-135844583|T/-|frameshift_variant	98.62937762414208	0.024200618960070384	6				NaN	NaN	0	NaN	9652	3592	13244
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13247	34.537	NaN	27672	30	0	3352.3	0.106			+	10157	ESSSSSKLKR	10	89	554.8012192709865	1107.587885608773	2	554.803955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ESSSSSKLKR_	REV__ENSG00000102010|ENST00000348343|BMX	69.6276240434122	0.2803623802747859	6				NaN	NaN	0	NaN	9653	3592	13244
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13248	34.539	NaN	15300	30	0	3626.2	0.106	+			14903	GTLSSYIVK	9	76	484.27632422372517	NaN	0	484.2763671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTLSSYIVK_	ENSG00000082068|ENST00000265107|WDR70	93.1432384553994	0.0352600271724948	6				NaN	NaN	0	NaN	9654	3592	13244
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13249	34.541	NaN	17369	30	0	1384	0.106	+			51426	YTVSNTRPL	9	94	525.7809165169804	1049.5472801007606	2	525.783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YTVSNTRPL_	ENST00000502513.1_1_4:944259-945532:+|nuORF	66.42927471994793	0.16001998865088202	6				NaN	NaN	0	NaN	9655	3592	13244
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13250	34.542	NaN	8035.9	30	0	609.17	0.035			+	28583	NKKMTRDE	8	78	511.2578767286314	1020.5012005240628	2	511.2588195800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NKKMTRDE_	REV__ENSG00000082269|ENST00000418814|FAM135A;REV__FAM135A|p.N1165Ifs*3|1|0.07|ENSG00000082269|chr6:70526577-70526578|-/T|frameshift_variant;REV__nc|ENSG00000082269|Q9P2D6-2|FAM135A;REV__nc|ENSG00000082269|Q9P2D6-3|FAM135A;REV__nc|ENSG00000082269|Q9P2D6-4|FAM135A	58.78195531508484	0.5138399468736706	6				NaN	NaN	0	NaN	9656	3592	13244
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13251	34.543	NaN	4286.6	30	0	674.88	0.139				-1	 	0	56	402.75688618956	803.4992194459201	2	402.75811767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9657	3592	13244
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13269	34.582	NaN	23400	30	0	1917.4	0.214				-1	VSLLLMAGLC	10	96	518.2833802239835	1034.552207514767	2	518.2850341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_VSLLLM(Oxidation (M))AGLC_	ENSG00000169026|ENST00000322224|SLC49A3;ENST00000512400.1_1_4:675749-678780:-|nuORF;nc|ENSG00000169026|Q6UXD7-3|SLC49A3;nc|ENSG00000169026|Q6UXD7|SLC49A3	55.50420428727701	0.4067289358710215	6				NaN	NaN	0	NaN	9672	3595	13268
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13270	34.586	NaN	12648	30	0	687.13	0.106				-1	 	0	89	531.8070335506477	1061.5995141680953	2	531.8091430664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9673	3595	13268
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13271	34.588	NaN	14543	30	0	963.79	0.106			+	-1	TWRGTVTHM	9	81	552.7665544461408	1103.5185559590816	2	552.7691040039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_TWRGTVTHM(Oxidation (M))_	REV__HTR1B|p.Y109H|1|0.28|ENSG00000135312|chr6:77463079-77463079|A/G|missense_variant	56.72105179125745	0.24094814563026265	6				NaN	NaN	0	NaN	9674	3595	13268
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13272	34.59	NaN	13436	30	0	2554.8	0.106				-1	 	0	65	436.26468056075555	870.5148081883111	2	436.265869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9675	3595	13268
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13273	34.592	NaN	14751	30	0	1809.2	0.106				-1	 	0	81	501.28338450092906	1000.5522160686581	2	501.2849426269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9676	3595	13268
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13274	34.593	NaN	13181	30	0	1110.2	0.036	+			25192	LMFVKSGQY	9	81	536.781097391162	NaN	0	536.7811889648438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LMFVKSGQY_	ENSG00000226690|ENST00000636804|unknown;nc|nan|A0A1B0GVB3-2|C7orf78	49.44154591367651	0.21054156626303966	6				NaN	NaN	0	NaN	9677	3595	13268
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13275	34.594	NaN	9388.1	30	0	829.47	0.142	+			39888	STLQVGSLNVK	11	85	573.3286269730863	1144.6427010129726	2	573.330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_STLQVGSLNVK_	ENSG00000063854|ENST00000397356|HAGH;ENST00000569700.5_1_16:1869077-1876788:-|nuORF;nc|ENSG00000063854|Q16775-2|HAGH	67.21430809963624	0.25905749411346113	6				NaN	NaN	0	NaN	9678	3595	13268
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13291	34.629	NaN	71428	30	0	22156	0.166				-1	 	0	81	564.3352453156173	1126.6559376980344	2	564.3375854492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9691	3598	13290
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13292	34.632	NaN	21797	30	0	2712.8	0.106				-1	 	0	89	524.2941222973003	1046.5736916614005	2	524.2958374023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9692	3598	13290
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13293	34.634	NaN	11135	30	0	1380.7	0.106				-1	 	0	75	350.72027758498854	699.4260022367771	2	350.7213134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9693	3598	13290
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13294	34.635	NaN	11809	30	0	2854	0.106	+			12186	GANSLFLEK	9	76	489.76487826087345	977.5152035885469	2	489.7664489746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GANSLFLEK_	ENSG00000183864|ENST00000327492|TOB2	125.71293069911285	0.017741295328254008	6				NaN	NaN	0	NaN	9694	3598	13290
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13295	34.637	NaN	15187	30	0	1226.5	0.106	+			50732	YEIVNRASL	9	94	532.7889475666668	1063.5633422001335	2	532.7905883789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YEIVNRASL_	DYNC1H1|p.W4201Gfs*43|1|0.42|ENSG00000197102|chr14:102043958-102043958|G/-|frameshift_variant;ENSG00000197102|ENST00000360184|DYNC1H1;ENST00000556791.1_1_14:102499420-102503925:+|nuORF	56.43379154798735	0.2433427591689151	6				NaN	NaN	0	NaN	9695	3598	13290
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13296	34.639	NaN	15865	30	0	2635.5	0.106	+			24989	LLEAYIEAR	9	88	539.2991797345326	1076.583806535865	2	540.3088989257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LLEAYIEAR_	ENSG00000248383|ENST00000253807|PCDHAC1;nc|ENSG00000248383|Q9H158-2|PCDHAC1;PCDHAC1|p.E339Nfs*5|1|0.36|ENSG00000248383|chr5:140927902-140927902|C/-|frameshift_variant	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	9696	3598	13290
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13297	34.641	NaN	7120.7	30	0	2603.4	0.034			+	-1	MTAKTRNL	8	73	475.75839631864613	949.5022397040923	2	475.76019287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_M(Oxidation (M))TAKTRNL_	REV__ENSG00000171444|ENST00000408903|MCC;REV__ENST00000502648.5_1_5:112437417-112458501:-|nuORF;REV__ENST00000505604.1_1_5:112437417-112440086:-|nuORF;REV__nc|ENSG00000171444|P23508|MCC	33.51558372728122	0.7005509609380386	6				NaN	NaN	0	NaN	9697	3598	13290
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13315	34.678	NaN	113530	30	0	53469	0.148	+			49891	VYTSGVYHI	9	77	519.76528873516	1037.5160245371198	2	519.7667846679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYTSGVYHI_	ENSG00000111077|ENST00000314250|TNS2;ENST00000549311.7_1_12:53443879-53456445:+|nuORF;nc|ENSG00000111077|Q63HR2-2|TNS2;nc|ENSG00000111077|Q63HR2-4|TNS2;nc|ENSG00000111077|Q63HR2-5|TNS2;nc|ENSG00000111077|Q63HR2-6|TNS2;TNS2|p.G362Rfs*43|1|0.33|ENSG00000111077|chr12:53058087-53058088|-/A|frameshift_variant;TNS2|p.K660Nfs*96|1|0.2|ENSG00000111077|chr12:53059615-53059615|G/-|frameshift_variant;TNS2|p.P495Rfs*25|2|0.33|ENSG00000111077|chr12:53059119-53059119|C/-|frameshift_variant	128.8611167810002	0.015835461597062447	6				NaN	NaN	0	NaN	9712	3601	13314
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13316	34.681	NaN	105750	30	0	17454	0.106			+	49716	VYMNVYFL	8	93	524.7628739504355	1047.511194967671	2	524.7646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYMNVYFL_	REV__ENSG00000174944|ENST00000309170|P2RY14	77.94384346573518	0.3407065481025094	6				NaN	NaN	0	NaN	9713	3601	13314
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13317	34.683	NaN	15309	30	0	1759.1	0.106	+			27221	MEKGDMVTL	9	81	512.2442361915947	1022.4739194499895	2	512.24658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MEKGDMVTL_	ENSG00000182551|ENST00000327435|ADI1;nc|ENSG00000182551|Q9BV57-2|ADI1	78.26377905018397	0.10505600812668463	6				NaN	NaN	0	NaN	9714	3601	13314
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13318	34.685	NaN	15149	30	0	1611.9	0.106	+			35838	SEDDVKMAL	9	84	504.23730373676983	1006.4600545403397	2	504.23931884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SEDDVKMAL_	ENSG00000169813|ENST00000682386|HNRNPF	104.0567914643314	0.03506238181059741	6				NaN	NaN	0	NaN	9715	3601	13314
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13319	34.687	NaN	19853	30	0	2470.6	0.106	+			23402	LAALPHSCL	9	83	491.2620269186582	980.5095009041164	2	491.2627868652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_LAALPHSC(Carbamidomethyl (C))L_	ENSG00000143248|ENST00000313961|RGS5;nc|ENSG00000143248|O15539-3|RGS5;RGS5|p.N90Tfs*40|1|0.22|ENSG00000143248|chr1:163152665-163152665|T/-|frameshift_variant;RGS5|p.P30Ffs*54|1|0.05|ENSG00000143248|chr1:163168325-163168326|-/AA|frameshift_variant;RGS5|p.P30Lfs*54|1|0.05|ENSG00000143248|chr1:163168324-163168325|-/TA|frameshift_variant	97.47269410471826	0.04379738608259218	6				NaN	NaN	0	NaN	9716	3601	13314
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13320	34.688	NaN	43528	30	0	5160.7	0.106			+	12026	FYCRELVAF	9	94	602.7943251645031	1203.5740973958061	2	602.79638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_FYC(Carbamidomethyl (C))RELVAF_	REV__ENST00000280330.12_1_5:10227736-10236644:-|nuORF;REV__ENST00000510052.5_1_5:10227736-10249985:-|nuORF	56.72105179125745	0.24094814563026265	6				NaN	NaN	0	NaN	9717	3601	13314
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13321	34.69	NaN	11050	30	0	1451.9	0.036			+	-1	YIRCTCIK	8	81	528.77097790309	1055.52740287298	2	528.7725830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_YIRC(Carbamidomethyl (C))TCIK_	REV__ENST00000182527.3_1_6:52362386-52362449:-|nuORF	56.72105179125745	0.5342425954139568	6				NaN	NaN	0	NaN	9718	3601	13314
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13339	34.728	NaN	144140	30	0	26168	0.171	+			47442	VPTRLEGWF	9	106	552.7952465328348	1103.5759401324694	2	552.7977294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VPTRLEGWF_	ENSG00000168350|ENST00000305631|DEGS2	68.84614121027924	0.14577793175421136	6				NaN	NaN	0	NaN	9733	3604	13338
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13340	34.731	NaN	67426	30	0	12833	0.106	+			45259	TVQFLVPQ	8	93	466.2661628278217	930.5177727224434	2	466.267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TVQFLVPQ_	ENSG00000047621|ENST00000261250|C12orf4;ENST00000544258.1_3_12:4598975-4611546:-|nuORF	116.90359126533652	0.23898233959989007	6				NaN	NaN	0	NaN	9734	3604	13338
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13341	34.733	NaN	78180	30	0	6748.2	0.106	+			33851	RRGHKNDATE	10	104	592.2997982844159	1182.5850436356318	2	592.302490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RRGHKNDATE_	ENSG00000168702|ENST00000389484|LRP1B;LRP1B|p.C2682Vfs*15|1|0.3|ENSG00000168702|chr2:140516994-140516994|A/-|frameshift_variant;LRP1B|p.C3762Lfs*2|1|0.32|ENSG00000168702|chr2:140358089-140358090|-/A|frameshift_variant;LRP1B|p.G4130Mfs*20|1|0.06|ENSG00000168702|chr2:140324019-140324020|-/AT|frameshift_variant;LRP1B|p.H4368Tfs*4|1|0.47|ENSG00000168702|chr2:140274465-140274465|C/-|frameshift_variant;LRP1B|p.I3028Nfs*2|1|0.39|ENSG00000168702|chr2:140492645-140492646|-/T|frameshift_variant;LRP1B|p.K2543Nfs*42|1|0.08|ENSG00000168702|chr2:140536594-140536594|T/-|frameshift_variant;LRP1B|p.N3100Kfs*6|1|0.21|ENSG00000168702|chr2:140485468-140485469|-/T|frameshift_variant;LRP1B|p.N3434Tfs*84|1|0.47|ENSG00000168702|chr2:140442617-140442617|T/-|frameshift_variant;LRP1B|p.N4135Mfs*14|1|0.13|ENSG00000168702|chr2:140324003-140324003|T/-|frameshift_variant;LRP1B|p.R3957Kfs*11|2|0.15|ENSG00000168702|chr2:140350819-140350820|-/T|frameshift_variant;LRP1B|p.T2640Pfs*5|1|0.12|ENSG00000168702|chr2:140525952-140525952|T/-|frameshift_variant;LRP1B|p.Y3120*|1|0.16|ENSG00000168702|chr2:140485402-140485408|AGTAGGG/-|frameshift_variant	52.936696900407355	0.4300801048568001	6				NaN	NaN	0	NaN	9735	3604	13338
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13342	34.734	NaN	31831	30	0	4660.3	0.106			+	45861	VALREEQP	8	90	471.25696983496	940.49938673672	2	471.25823974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VALREEQP_	REV__ENSG00000258366|ENST00000360203|RTEL1;REV__ENST00000480273.5_1_20:62319266-62327135:+|nuORF;REV__ENST00000496281.1_1_20:62323608-62327208:+|nuORF;REV__ENST00000496816.5_1_20:62325699-62327208:+|nuORF;REV__nc|ENSG00000258366|Q9NZ71-2|RTEL1;REV__nc|ENSG00000258366|Q9NZ71-5|RTEL1;REV__nc|ENSG00000258366|Q9NZ71-7|RTEL1;REV__nc|ENSG00000258366|Q9NZ71-9|RTEL1;REV__nc|ENSG00000258366|Q9NZ71|RTEL1	47.91560031466742	0.6071945918984287	6				NaN	NaN	0	NaN	9736	3604	13338
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13343	34.736	NaN	58538	30	0	10052	0.106	+			49929	VYVERAEVL	9	94	539.2991797345326	1076.583806535865	2	539.3013916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VYVERAEVL_	ENSG00000089234|ENST00000419234|BRAP	106.68306549817024	0.032382560583716295	6				NaN	NaN	0	NaN	9737	3604	13338
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13344	34.738	NaN	46753	30	0	10708	0.106			+	-1	QSALKLICLM	10	84	392.8876988566225	1175.6412671700675	3	392.88909912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_QSALKLIC(Carbamidomethyl (C))LM_	REV__ENSG00000176225|ENST00000640769|RTTN;REV__ENST00000583043.5_1_18:67684852-67806940:-|nuORF;REV__ENST00000583765.1_1_18:67687135-67692051:-|nuORF;REV__nc|ENSG00000176225|Q86VV8-3|RTTN	41.42661286455405	0.5359995577334734	6				NaN	NaN	0	NaN	9738	3604	13338
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13345	34.74	NaN	16279	30	0	2095.6	0.035			+	-1	SFPLLIMY	8	98	500.26515979283494	998.5157666524699	2	500.2668151855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_SFPLLIM(Oxidation (M))Y_	REV__ENSG00000183840|ENST00000329321|GPR39	46.76643321282427	0.6143254112625767	6				NaN	NaN	0	NaN	9739	3604	13338
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13363	34.777	NaN	90261	30	0	27471	0.214	+			7747	DNDFKILQ	8	95	496.7560272615543	991.4975015899087	2	496.75738525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DNDFKILQ_	ENST00000412878.2_1_10:53079965-53080385:+|nuORF	110.11987700582712	0.24509564897437786	6				NaN	NaN	0	NaN	9754	3607	13362
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13364	34.781	NaN	14725	30	0	1562.6	0.106	+			17025	HPVFQQESF	9	80	559.7646991722835	1117.5148454113669	2	559.7670288085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HPVFQQESF_	ENSG00000170430|ENST00000651593|MGMT	110.11987700582712	0.028875675806141952	6				NaN	NaN	0	NaN	9755	3607	13362
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13365	34.783	NaN	18245	30	0	1903.7	0.106			+	43597	TILATRSKQ	9	84	509.3066617266682	1016.5987705201364	2	509.3082275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TILATRSKQ_	REV__PANK1|p.K400Sfs*23|1|0.36|ENSG00000152782|chr10:89599363-89599363|T/-|frameshift_variant	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	9756	3607	13362
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13366	34.785	NaN	10838	30	0	1181.7	0.106	+			51168	YPDRIMNTF	9	82	586.7743014535665	1171.534049973933	2	586.774169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_YPDRIM(Oxidation (M))NTF_	ENSG00000137267|ENST00000333628|TUBB2A;ENSG00000137285|ENST00000259818|TUBB2B;ENSG00000188229|ENST00000340384|TUBB4B;ENSG00000196230|ENST00000327892|TUBB;ENSG00000258947|ENST00000315491|TUBB3;ENST00000518096.1_1_8:30209523-30210210:+|nuORF;ENST00000604929.1_1_9:140136931-140138005:+|nuORF;nc|ENSG00000258947|Q13509-2|TUBB3;TUBB2B|p.D177Hfs*21|1|0.32|ENSG00000137285|chr6:3225559-3225560|TC/-|frameshift_variant;TUBB2B|p.S168N|1|0.15|ENSG00000137285|chr6:3225586-3225586|C/T|missense_variant	109.47833844074708	0.029530294723441826	6				NaN	NaN	0	NaN	9757	3607	13362
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13367	34.787	NaN	11424	30	0	1086.9	0.106	+			43270	TFELLSPTGVL	11	75	588.8278710767495	1175.6411892202989	2	588.8294677734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TFELLSPTGVL_	ENSG00000076356|ENST00000367033|PLXNA2	40.77816245573522	0.5472954108598816	6				NaN	NaN	0	NaN	9758	3607	13362
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13368	34.788	NaN	13604	30	0	3378.7	0.036			+	26506	LTNDYKVTL	9	101	533.7907978482239	1065.5670427632476	2	533.7926025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LTNDYKVTL_	REV__ENST00000482870.6_1_19:42071403-42092879:+|nuORF;REV__nc|ENSG00000007129|Q3KPI0-2|CEACAM21	47.95952297671804	0.32689736945648856	6				NaN	NaN	0	NaN	9759	3607	13362
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13369	34.789	NaN	14111	30	0	1298.8	0.14				-1	 	0	79	499.83226414388946	997.6499753545789	2	499.83380126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9760	3607	13362
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13387	34.824	NaN	31554	30	0	4766.6	0.214	+			18376	IQTFPNQL	8	87	480.7611050626159	959.5076571920318	2	480.7624206542969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IQTFPNQL_	ENSG00000120800|ENST00000261637|UTP20;UTP20|p.A1865Sfs*12|1|0.08|ENSG00000120800|chr12:101356982-101356983|-/ATCCTTTAGTC|frameshift_variant	73.97473282117947	0.3737790450121076	6				NaN	NaN	0	NaN	9775	3610	13386
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13388	34.827	NaN	21088	30	0	1979.7	0.106	+			50667	YEEELREL	8	99	540.7622094922826	1079.5098660513652	2	540.7635498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YEEELREL_	ENSG00000175084|ENST00000373960|DES	90.60085204095205	0.2756512185673585	6				NaN	NaN	0	NaN	9776	3610	13386
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13389	34.829	NaN	11522	30	0	1622.1	0.106				-1	EGAMESMKPLL	11	82	611.2949353292229	1220.5753177252457	2	611.29638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_EGAM(Oxidation (M))ESMKPLL_	ENSG00000172840|ENST00000311765|PDP2	49.536043120802724	0.4274608637932522	6				NaN	NaN	0	NaN	9777	3610	13386
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13390	34.831	NaN	25983	30	0	7914.3	0.106				-1	 	0	94	348.88035594320047	1043.6192384298015	3	348.8813781738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9778	3610	13386
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13391	34.833	NaN	13765	30	0	2279.1	0.106	+			12814	GEMTLKSAL	9	77	475.2541620602205	NaN	0	475.2540588378906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GEMTLKSAL_	ENSG00000041357|ENST00000044462|PSMA4;nc|ENSG00000041357|P25789-2|PSMA4	109.47833844074708	0.010168233843482827	6				NaN	NaN	0	NaN	9779	3610	13386
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13392	34.835	NaN	16785	30	0	1511.8	0.106			+	37048	SIRVRSDRY	9	86	576.317373556045	1150.62019417889	2	576.3191528320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SIRVRSDRY_	REV__ENST00000199448.8_2_7:37960327-37960474:+|nuORF	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	9780	3610	13386
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13393	34.837	NaN	36573	30	0	9582.9	0.037				-1	 	0	96	569.2879508622797	1136.5613487913593	2	569.2900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9781	3610	13386
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13411	34.874	NaN	49759	30	0	23167	0.197	+			30492	QAFAQVFNK	9	96	526.7786192915826	1051.542685649965	2	526.7802124023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QAFAQVFNK_	BZW1|p.N285Tfs*11|2|0.26|ENSG00000082153|chr2:200818782-200818782|A/-|frameshift_variant;BZW1|p.N286*|1|0.04|ENSG00000082153|chr2:200818790-200818791|-/T|frameshift_variant;BZW1|p.S325Rfs*19|1|0.04|ENSG00000082153|chr2:200819989-200819990|-/ACAATATAGAA|frameshift_variant;ENSG00000082153|ENST00000409600|BZW1;nc|ENSG00000082153|Q7L1Q6-2|BZW1;nc|ENSG00000082153|Q7L1Q6-3|BZW1;nc|ENSG00000082153|Q7L1Q6-4|BZW1	143.10689835833298	0.00902249513149409	6				NaN	NaN	0	NaN	9796	3613	13410
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13412	34.877	NaN	74352	30	0	14298	0.106	+			14578	GTFSKLFGK	9	118	492.7780498198951	983.5415467065902	2	492.77911376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTFSKLFGK_	ENSG00000188112|ENST00000341865|C6orf132;nc|nan|Q5T0Z8-2|C6orf132;nc|nan|Q5T0Z8-4|C6orf132	134.7655990226056	0.012935733000282069	6				NaN	NaN	0	NaN	9797	3613	13410
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13413	34.88	NaN	12234	30	0	1371.5	0.106	+			47560	VRCVWLPVD	9	90	543.7932862453239	1085.5720195574477	2	543.2926025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VRCVWLPVD_	ENST00000442747.5_1_3:48538615-48541864:-|nuORF	54.776311868738084	0.25715957988447635	6				NaN	NaN	0	NaN	9798	3613	13410
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13414	34.881	NaN	21763	30	0	1640.3	0.106	+			11581	FPNRFSGRQ	9	93	554.7858396193035	1107.5571263054069	2	554.787353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FPNRFSGRQ_	nc|ENSG00000211715|A0A0A0MS03|TRBV5-3	41.42661286455405	0.403525789677298	6				NaN	NaN	0	NaN	9799	3613	13410
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13415	34.883	NaN	26838	30	0	2546.7	0.106			+	23851	LDCCHRLI	8	85	486.7426469390013	NaN	0	486.74261474609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LDCCHRLI_	REV__ENSG00000223601|ENST00000422359|EBLN1	68.484700416344	1.7418937515398478	6				NaN	NaN	0	NaN	9800	3613	13410
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13416	34.885	NaN	13080	30	0	1452.4	0.106	+			27216	MEKERHRQH	9	82	633.8094414403479	1265.6043299474957	2	633.811279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_M(Oxidation (M))EKERHRQH_	ARFGEF1|p.F1680Lfs*8|1|0.29|ENSG00000066777|chr8:67203171-67203171|A/-|frameshift_variant;ARFGEF1|p.F501Lfs*19|1|0.46|ENSG00000066777|chr8:67271771-67271771|A/-|frameshift_variant;ARFGEF1|p.G612Vfs*2|1|0.33|ENSG00000066777|chr8:67266964-67266964|T/-|frameshift_variant;ARFGEF1|p.K888Rfs*10|1|0.36|ENSG00000066777|chr8:67253485-67253486|TT/-|frameshift_variant;ENSG00000066777|ENST00000262215|ARFGEF1	90.36981228632155	0.0638227155548745	6				NaN	NaN	0	NaN	9801	3613	13410
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13417	34.887	NaN	15221	30	0	5332.5	0.035				-1	 	0	81	328.854235402211	983.540876806833	3	328.8551940917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9802	3613	13410
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13435	34.923	NaN	20401	30	0	1188.5	0.214	+			41209	SVLEEEVEL	9	90	523.7669936247091	1045.5194343162182	2	523.76904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVLEEEVEL_	CTCFL|p.A642Efs*10|1|0.05|ENSG00000124092|chr20:57498614-57498617|CTGG/-|frameshift_variant;ENSG00000124092|ENST00000243914|CTCFL;nc|ENSG00000124092|Q8NI51-2|CTCFL;nc|ENSG00000124092|Q8NI51-3|CTCFL;nc|ENSG00000124092|Q8NI51-4|CTCFL;nc|ENSG00000124092|Q8NI51-7|CTCFL;nc|ENSG00000124092|Q8NI51-8|CTCFL;nc|ENSG00000124092|Q8NI51-9|CTCFL	58.78195531508484	0.22376836668196862	6				NaN	NaN	0	NaN	9817	3616	13434
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13436	34.927	NaN	25471	30	0	2606.5	0.106			+	8611	ECLSSLGSVL	10	85	504.2587860766797	1006.5030192201594	2	504.2613830566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ECLSSLGSVL_	REV__ENSG00000184178|ENST00000401642|SCFD2;REV__nc|ENSG00000184178|Q8WU76-2|SCFD2;REV__SCFD2|p.I526Tfs*7|1|0.18|ENSG00000184178|chr4:52920855-52920856|-/GTCTGTATATG|frameshift_variant	66.42927471994793	0.3073667423445326	6				NaN	NaN	0	NaN	9818	3616	13434
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13437	34.929	NaN	18358	30	0	1309	0.106	+			26888	LWRNALEA	8	90	486.7663126460848	971.5180723589697	2	486.7679138183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LWRNALEA_	ENSG00000130383|ENST00000588525|FUT5;ENSG00000156413|ENST00000318336|FUT6;ENSG00000171124|ENST00000303225|FUT3;nc|ENSG00000156413|P51993-2|FUT6	76.84663266511073	0.3498490246073164	6				NaN	NaN	0	NaN	9819	3616	13434
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13438	34.931	NaN	12158	30	0	620.89	0.106	+			30916	QELEIIRVY	9	81	581.8253304434661	1161.636107953732	2	581.8272705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QELEIIRVY_	C1D|p.R89I|1|0.08|ENSG00000197223|chr2:68043049-68043049|C/A|missense_variant	52.936696900407355	0.27249468807391813	6				NaN	NaN	0	NaN	9820	3616	13434
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13439	34.933	NaN	14308	30	0	5350.5	0.106			+	-1	QLSCNKDCLPC	11	79	669.2865293851443	1336.5585058370884	2	669.2886962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C)	_QLSC(Carbamidomethyl (C))NKDC(Carbamidomethyl (C))LPC_	REV__ANO3|p.F764Lfs*11|1|0.14|ENSG00000134343|chr11:26643195-26643195|T/-|frameshift_variant;REV__ANO3|p.I617Lfs*8|1|0.05|ENSG00000134343|chr11:26624469-26624469|A/-|frameshift_variant;REV__ANO3|p.L701*|1|0.45|ENSG00000134343|chr11:26639198-26639198|T/-|frameshift_variant;REV__ENSG00000134343|ENST00000256737|ANO3;REV__ENST00000529242.1_1_11:26563580-26584615:+|nuORF;REV__nc|ENSG00000134343|Q9BYT9-2|ANO3	27.047317107675042	0.7060868989289394	6				NaN	NaN	0	NaN	9821	3616	13434
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13440	34.935	NaN	17865	30	0	3137.2	0.037			+	10277	ETLSLQSQDT	10	92	561.2716802709386	1120.5288076086772	2	561.2742309570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ETLSLQSQDT_	REV__DRC7|p.K380Q|1|0.05|ENSG00000159625|chr16:57718407-57718407|A/C|missense_variant	65.46538089061403	0.31613324008013116	6				NaN	NaN	0	NaN	9822	3616	13434
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13441	34.935	NaN	12403	30	0	1830.7	0.141	+			12595	GEHIIAGAGEL	11	76	533.7791466193698	1065.5437403055396	2	533.7810668945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GEHIIAGAGEL_	ENSG00000167658|ENST00000309311|EEF2	63.53385203322761	0.2919106290768168	6				NaN	NaN	0	NaN	9823	3616	13434
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13459	34.975	NaN	69567	30	0	9778.8	0.214			+	24961	LLANRTSTE	9	92	502.77255952910076	1003.5305661250015	2	502.77392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LLANRTSTE_	REV__tr|U7T3U9|U7T3U9_FUSNUReplicationproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00268PE=4SV=1	55.50420428727701	0.2510918378945873	6				NaN	NaN	0	NaN	9838	3619	13458
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13460	34.978	NaN	51495	30	0	11845	0.106				-1	 	0	97	564.3352453156173	1126.6559376980344	2	564.3372802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9839	3619	13458
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13461	34.98	NaN	20294	30	0	2448.4	0.106	+			40472	STVVLQSPQQ	10	87	543.7932862453239	1085.5720195574477	2	543.7952880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STVVLQSPQQ_	ENSG00000048991|ENST00000683871|R3HDM1;nc|ENSG00000048991|Q15032-2|R3HDM1;nc|ENSG00000048991|Q15032-3|R3HDM1;nc|ENSG00000048991|Q15032-4|R3HDM1;nc|ENSG00000048991|Q15032|R3HDM1;R3HDM1|p.A971Lfs*26|1|0.4|ENSG00000048991|chr2:135722514-135722514|A/-|frameshift_variant	71.87747018426188	0.26198133118427214	6				NaN	NaN	0	NaN	9840	3619	13458
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13462	34.982	NaN	11496	30	0	1368.9	0.106				-1	 	0	62	436.2702117724625	870.525870611725	2	436.27130126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9841	3619	13458
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13463	34.984	NaN	17481	30	0	1854.8	0.106			+	50480	YAIQAMCIR	9	77	534.7704582673684	1067.5263636015368	2	534.772216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YAIQAMCIR_	REV__ENSG00000214717|ENST00000652001|ZBED1	53.351449002276354	0.2690372970092375	6				NaN	NaN	0	NaN	9842	3619	13458
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13464	34.986	NaN	36709	30	0	5000.6	0.035				-1	 	0	96	508.7544001097934	1015.4942472863868	2	508.75555419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9843	3619	13458
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13465	34.986	NaN	11946	30	0	2050.3	0.139			+	12007	FVVMNVPF	8	79	484.7470837878082	967.4796146424164	2	485.754150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_FVVM(Oxidation (M))NVPF_	REV__ENSG00000140107|ENST00000361529|SLC25A47	74.51659920185547	0.36926395944126233	6				NaN	NaN	0	NaN	9844	3619	13458
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13483	35.026	NaN	136130	30	0	13728	0.153			+	13924	GRPVQRVGH	9	93	503.288770536396	1004.562988139592	2	503.2903747558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GRPVQRVGH_	REV__ENST00000591701.5_1_19:10887861-10906203:+|nuORF	44.116797842482775	0.37197099687881774	6				NaN	NaN	0	NaN	9859	3622	13482
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13484	35.028	NaN	30321	30	0	3986.3	0.106	+			1191	AENPGKYNIL	10	98	559.7942684470091	1117.5739839608182	2	559.7960815429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AENPGKYNIL_	ENSG00000153187|ENST00000640218|HNRNPU;nc|ENSG00000153187|Q00839-2|HNRNPU	88.17693792209575	0.14151128060301246	6				NaN	NaN	0	NaN	9860	3622	13482
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13485	35.03	NaN	23642	30	0	2681.7	0.106			+	50481	YAIQAMCIR	9	89	534.7704582673684	1067.5263636015368	2	534.7719116210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YAIQAMCIR_	REV__ENSG00000214717|ENST00000652001|ZBED1	55.50420428727701	0.2510918378945873	6				NaN	NaN	0	NaN	9861	3622	13482
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13486	35.032	NaN	21602	30	0	2498.3	0.106				-1	YIAPMRSL	8	81	483.75822063225974	965.5018883313195	2	483.76043701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_YIAPM(Oxidation (M))RSL_	ENSG00000144028|ENST00000323853|SNRNP200;nc|ENSG00000144028|O75643-2|SNRNP200	50.0245360154114	0.5941082100236891	6				NaN	NaN	0	NaN	9862	3622	13482
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13487	35.034	NaN	27769	30	0	2223.2	0.106			+	28271	NDWSYTKIQ	9	79	577.7772939629662	1153.5400349927322	2	577.7796630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NDWSYTKIQ_	REV__ENSG00000105514|ENST00000222120|RAB3D;REV__ENSG00000105649|ENST00000222256|RAB3A;REV__ENSG00000152932|ENST00000282878|RAB3C;REV__ENSG00000169213|ENST00000371655|RAB3B;REV__ENST00000381158.3_1_5:58084179-58147175:+|nuORF	52.936696900407355	0.27249468807391813	6				NaN	NaN	0	NaN	9863	3622	13482
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13488	35.036	NaN	9227.5	30	0	1576.9	0.106	+			13359	GLAAFRWI	8	69	467.27089373975565	932.5272345463113	2	467.2736511230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GLAAFRWI_	CCDC127|p.C174*|1|0.12|ENSG00000164366|chr5:205558-205558|G/-|frameshift_variant;ENSG00000164366|ENST00000296824|CCDC127	46.76643321282427	0.6143254112625767	6				NaN	NaN	0	NaN	9864	3622	13482
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13489	35.038	NaN	11281	30	0	983.12	0.036	+			23301	KYNPTRNSN	9	82	547.270448377938	1092.526343822676	2	547.2732543945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KYNPTRNSN_	ENSG00000166987|ENST00000355673|MBD6	70.8162118820467	0.13725933411854815	6				NaN	NaN	0	NaN	9865	3622	13482
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13507	35.075	NaN	152660	30	0	63994	0.18				-1	 	0	108	360.2206160981749	1077.6400188947248	3	360.2217102050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9880	3625	13506
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13508	35.078	NaN	138350	30	0	12025	0.106				-1	 	0	114	539.8275562627759	1077.6405595923518	2	539.8292846679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9881	3625	13506
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13509	35.08	NaN	21782	30	0	6635.5	0.106	+			27454	MLLLLVPA	8	72	464.2835573148803	926.5525616965606	2	464.284423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))M(Oxidation (M))LLLLVPA_	nc|ENSG00000211795|A0A0B4J262|TRAV8-6	67.3271909547111	0.42924334279516513	6				NaN	NaN	0	NaN	9882	3625	13506
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13510	35.082	NaN	12040	30	0	4119.1	0.106	+			8531	EAVDTGRVL	9	78	480.2612124508863	NaN	0	480.2611999511719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EAVDTGRVL_	CSPG4|p.E1665Sfs*10|1|0.39|ENSG00000173546|chr15:75677845-75677845|G/-|frameshift_variant;ENSG00000173546|ENST00000308508|CSPG4	69.6276240434122	0.10825701912424071	6				NaN	NaN	0	NaN	9883	3625	13506
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13511	35.084	NaN	13665	30	0	1649.6	0.106	+			20032	KEITALAPSTM	11	76	581.3115607102197	1160.6085684872394	2	581.31298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KEITALAPSTM_	ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000184009|ENST00000573283|ACTG1;ENST00000415776.1_1_Y:19868883-19869072:-|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000493945.5_1_7:5567381-5567853:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2	99.78786539795823	0.061125669442822994	6				NaN	NaN	0	NaN	9884	3625	13506
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13512	35.086	NaN	41224	30	0	7041.2	0.106			+	27252	MERKDHEI	8	90	537.2561543794741	1072.497755825748	2	537.25830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_M(Oxidation (M))ERKDHEI_	REV__ENSG00000138698|ENST00000408927|RAP1GDS1;REV__nc|ENSG00000138698|P52306-2|RAP1GDS1;REV__nc|ENSG00000138698|P52306-3|RAP1GDS1;REV__nc|ENSG00000138698|P52306-4|RAP1GDS1;REV__nc|ENSG00000138698|P52306-5|RAP1GDS1;REV__nc|ENSG00000138698|P52306-6|RAP1GDS1;REV__RAP1GDS1|p.F245V|1|0.39|ENSG00000138698|chr4:98404572-98404572|T/G|missense_variant;REV__RAP1GDS1|p.G315Vfs*40|1|0.27|ENSG00000138698|chr4:98417398-98417398|A/-|frameshift_variant	66.42927471994793	0.4381325844043345	6				NaN	NaN	0	NaN	9885	3625	13506
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13513	35.088	NaN	37712	30	0	4222.7	0.037			+	-1	MAFDGRKVPC	10	77	590.7836790444987	1179.5528051557974	2	590.785400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_MAFDGRKVPC(Carbamidomethyl (C))_	REV__ENST00000473753.2_1_12:28343133-28343244:-|nuORF	60.11826168202944	0.36476464221954025	6				NaN	NaN	0	NaN	9886	3625	13506
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13531	35.123	NaN	104850	30	0	10268	0.189	+			12760	GELGNGNIKL	10	98	507.782313886584	NaN	0	507.78253173828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GELGNGNIKL_	ENSG00000132646|ENST00000379143|PCNA	154.1183686248401	3.232642445864537E-05	6				NaN	NaN	0	NaN	9901	3628	13530
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13532	35.126	NaN	256930	30	0	16727	0.106				-1	 	0	111	549.2833203228297	1096.5520877124593	2	549.2854614257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9902	3628	13530
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13533	35.128	NaN	18181	30	0	1994.7	0.106	+			25310	LPAPPTQNM	9	90	484.7470837878082	967.4796146424164	2	484.7469177246094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LPAPPTQNM_	ENSG00000141380|ENST00000415083|SS18;ENSG00000184402|ENST00000331758|SS18L1;nc|ENSG00000141380|Q15532-2|SS18;nc|ENSG00000184402|O75177-2|SS18L1;nc|ENSG00000184402|O75177-5|SS18L1;SS18|p.G113Vfs*11|1|0.35|ENSG00000141380|chr18:26057636-26057636|C/-|frameshift_variant	108.08749611321984	0.03094949498378333	6				NaN	NaN	0	NaN	9903	3628	13530
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13534	35.13	NaN	7684	30	0	758.64	0.106				-1	AEEAWCRGL	9	86	546.2520963289355	1090.489639724671	2	546.25390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_AEEAWC(Carbamidomethyl (C))RGL_	ENST00000570164.5_1_16:31501628-31501862:-|nuORF	53.351449002276354	0.2690372970092375	6				NaN	NaN	0	NaN	9904	3628	13530
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13535	35.132	NaN	3454.1	30	0	162.84	0.106	+			26683	LVGTLAKL	8	61	407.77227507462277	813.5299972160456	2	407.77349853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LVGTLAKL_	tr|U7SSW2|U7SSW2_FUSNUS1motifdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01396PE=3SV=1	53.351449002276354	0.5676011784961348	6				NaN	NaN	0	NaN	9905	3628	13530
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13536	35.133	NaN	10126	30	0	2396.7	0.106	+			26011	LSKSRQTM	8	81	475.75839631864613	949.5022397040923	2	475.7600402832031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LSKSRQTM_	ENSG00000109424|ENST00000262999|UCP1	57.81127852772723	0.5234495074909924	6				NaN	NaN	0	NaN	9906	3628	13530
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13537	35.135	NaN	11898	30	0	2167.2	0.035			+	-1	ISMGAFRLN	9	76	512.7689267402803	NaN	0	512.768798828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_ISM(Oxidation (M))GAFRLN_	REV__ENSG00000129946|ENST00000264554|SHC2;REV__ENST00000590113.4_1_19:435948-439002:-|nuORF	53.351449002276354	0.18359631779194618	6				NaN	NaN	0	NaN	9907	3628	13530
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13555	35.172	NaN	134510	30	0	21008	0.212				-1	 	0	101	460.251999982102	918.489447031004	2	460.2530822753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9922	3631	13554
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13556	35.176	NaN	44965	30	0	4646.1	0.106			+	1428	AEYFQLAAGY	10	93	566.7691642002219	1131.5237754672437	2	566.7709350585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEYFQLAAGY_	REV__DENND4B|p.P955Lfs*5|1|0.53|ENSG00000198837|chr1:153934212-153934212|G/-|frameshift_variant;REV__DENND4B|p.R1054Dfs*76|3|0.43|ENSG00000198837|chr1:153933653-153933653|G/-|frameshift_variant;REV__ENSG00000198837|ENST00000361217|DENND4B	76.7741389293348	0.22197596950688292	6				NaN	NaN	0	NaN	9923	3631	13554
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13557	35.178	NaN	34259	30	0	4214.7	0.106				-1	 	0	85	482.283397858968	962.552242784736	2	482.2843322753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9924	3631	13554
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13558	35.18	NaN	11044	30	0	1743.3	0.106	+			5714	AVFHKFKG	8	79	467.27089373975565	932.5272345463113	2	467.77203369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVFHKFKG_	ENSG00000133424|ENST00000397394|LARGE1;LARGE|p.K385Qfs*24|1|0.26|ENSG00000133424|chr22:33337780-33337781|-/G|frameshift_variant;nc|ENSG00000133424|O95461-2|LARGE1	37.028477286268924	0.6747514403204248	6				NaN	NaN	0	NaN	9925	3631	13554
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13559	35.181	NaN	17167	30	0	3328	0.106	+			25876	LSFSLRFPSPS	11	72	413.2231508589312	1236.6476231769936	3	413.2239990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSFSLRFPSPS_	ENST00000411419.6_1_10:126799584-126849578:-|nuORF	23.52269567125451	0.7430573033454468	6				NaN	NaN	0	NaN	9926	3631	13554
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13560	35.183	NaN	14138	30	0	776.06	0.034	+			24559	LGLWAGRAE	9	91	486.7663126460848	971.5180723589697	2	487.2689514160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LGLWAGRAE_	ENST00000366971.8_1_1:213031696-213031939:+|nuORF	63.30626980617807	0.18605348971131092	6				NaN	NaN	0	NaN	9927	3631	13554
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13561	35.184	NaN	7020.2	30	0	842.22	0.142	+			10613	EYMKVQTEI	9	77	570.782363062736	1139.5501731922718	2	570.7839965820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EYMKVQTEI_	ENSG00000135341|ENST00000369329|MAP3K7;nc|ENSG00000135341|O43318-2|MAP3K7	69.6276240434122	0.14239879520340665	6				NaN	NaN	0	NaN	9928	3631	13554
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13579	35.223	NaN	133030	30	0	13809	0.147			+	26976	LYLFRKKM	8	89	549.8277234642768	1097.6408939953535	2	549.82958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LYLFRKKM_	REV__ENST00000260604.8_1_2:55870335-55906871:-|nuORF	73.97473282117947	0.3737790450121076	6				NaN	NaN	0	NaN	9943	3634	13578
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13580	35.226	NaN	48709	30	0	4353.8	0.106				-1	 	0	100	540.752214210761	1079.489875488322	2	540.7540893554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9944	3634	13578
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13581	35.228	NaN	34412	30	0	2734.5	0.106			+	24184	LEQALNRR	8	104	500.2867815016371	998.5590100700742	2	500.2897033691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LEQALNRR_	REV__MED12L|p.T1760Pfs*44|1|0.42|ENSG00000144893|chr3:151388100-151388100|A/-|frameshift_variant	63.30626980617807	0.4690498839812213	6				NaN	NaN	0	NaN	9945	3634	13578
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13582	35.23	NaN	28338	30	0	2339	0.106			+	-1	PMFVSIVCL	9	88	512.7631398968953	1023.5117268605906	2	513.2673950195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_PM(Oxidation (M))FVSIVCL_	REV__ENSG00000138449|ENST00000261024|SLC40A1;REV__SLC40A1|p.L398Wfs*55|1|0.2|ENSG00000138449|chr2:189563794-189563794|G/-|frameshift_variant	50.0245360154114	0.3026755932229825	6				NaN	NaN	0	NaN	9946	3634	13578
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13583	35.231	NaN	16897	30	0	1894.2	0.106	+			25025	LLGTLEQPL	9	85	492.291863034567	982.569173135934	2	492.29254150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LLGTLEQPL_	ENST00000563678.1_1_16:31716740-31717107:+|nuORF	87.75429964447693	0.0711966946989736	6				NaN	NaN	0	NaN	9947	3634	13578
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13584	35.233	NaN	23007	30	0	3252	0.106			+	43817	TLQIAFVEG	9	89	489.2689645694755	976.523376205751	2	489.27056884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TLQIAFVEG_	REV__ENSG00000105376|ENST00000221980|ICAM5	41.42661286455405	0.403525789677298	6				NaN	NaN	0	NaN	9948	3634	13578
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13585	35.235	NaN	5526.2	30	0	1388.9	0.035			+	17281	IAANVNPLPV	10	52	336.5344378546052	NaN	0	336.5343017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IAANVNPLPV_	REV__ENSG00000113558|ENST00000353411|SKP1;REV__ENST00000506450.1_1_4:25624416-25624897:+|nuORF;REV__nc|ENSG00000113558|P63208-2|SKP1	24.20275056022122	0.4201028297492154	6				NaN	NaN	0	NaN	9949	3634	13578
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13603	35.272	NaN	34083	30	0	3976	0.214			+	38304	SRAGGQGHAR	10	93	498.7574555357604	995.5003581383208	2	498.7588806152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SRAGGQGHAR_	REV__ENST00000215941.8_1_22:38236204-38239997:-|nuORF	110.11987700582712	0.04764356995208832	6				NaN	NaN	0	NaN	9964	3637	13602
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13604	35.276	NaN	28034	30	0	2767.9	0.106	+			717	AEASMISKL	9	95	475.2548059596051	NaN	0	475.2549133300781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEASMISKL_	ENSG00000055130|ENST00000325222|CUL1	134.7655990226056	0.00014292611696254572	6				NaN	NaN	0	NaN	9965	3637	13602
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13605	35.278	NaN	12809	30	0	1403.7	0.106	+			27152	MCGTISVVKS	10	89	512.7631398968953	1023.5117268605906	2	512.7621459960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MCGTISVVKS_	ENST00000605035.5_1_6:348606-348948:+|nuORF	46.45678178249821	0.4896490706773647	6				NaN	NaN	0	NaN	9966	3637	13602
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13606	35.28	NaN	10800	30	0	1872.6	0.106			+	46704	VGLGRPRR	8	78	455.7883508262822	909.5621487193645	2	455.7894287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VGLGRPRR_	REV__ENST00000487556.5_1_1:43282804-43291395:+|nuORF	52.29916861842294	0.578018602984656	6				NaN	NaN	0	NaN	9967	3637	13602
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13607	35.282	NaN	18415	30	0	1868.6	0.106	+			29697	PGYSNLLPPP	10	77	527.7819852263262	1053.5494175194524	2	527.7838134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PGYSNLLPPP_	ENSG00000204335|ENST00000375281|SP5;SP5|p.L264Pfs*118|1|0.23|ENSG00000204335|chr2:170716991-170716992|-/C|frameshift_variant	66.42927471994793	0.3073667423445326	6				NaN	NaN	0	NaN	9968	3637	13602
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13608	35.284	NaN	10791	30	0	1068.7	0.037	+			46372	VEKYIEEQL	9	71	575.8013500757919	1149.5881472183837	2	575.8035888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VEKYIEEQL_	ARL2BP|p.S71Y|1|0.28|ENSG00000102931|chr16:57249771-57249771|C/A|missense_variant;ENSG00000102931|ENST00000219204|ARL2BP;nc|ENSG00000102931|Q9Y2Y0-2|ARL2BP	109.43880257439609	0.029570636687953285	6				NaN	NaN	0	NaN	9969	3637	13602
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13609	35.284	NaN	26496	30	0	2643.5	0.141			+	31021	QETIRFVSE	9	101	554.7858396193035	1107.5571263054069	2	554.7876586914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QETIRFVSE_	REV__DST|p.K5076Nfs*24|1|0.31|ENSG00000151914|chr6:56472218-56472218|T/-|frameshift_variant;REV__DST|p.L1539Ffs*11|1|0.39|ENSG00000151914|chr6:56611525-56611526|-/A|frameshift_variant;REV__DST|p.N1220Tfs*9|1|0.23|ENSG00000151914|chr6:56630354-56630354|T/-|frameshift_variant;REV__DST|p.T4428Nfs*23|1|0.12|ENSG00000151914|chr6:56497896-56497897|-/T|frameshift_variant;REV__ENSG00000151914|ENST00000680361|DST;REV__nc|ENSG00000151914|Q03001-14|DST;REV__nc|ENSG00000151914|Q03001-3|DST;REV__nc|ENSG00000151914|Q03001-8|DST;REV__nc|ENSG00000151914|Q03001-9|DST;REV__nc|ENSG00000151914|Q03001|DST	71.29570347882199	0.13518600952103718	6				NaN	NaN	0	NaN	9970	3637	13602
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13627	35.323	NaN	44294	30	0	11191	0.214	+			1070	AEKVEIATL	9	83	487.28115120362594	972.5477494740519	2	487.2816162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEKVEIATL_	ENSG00000041357|ENST00000044462|PSMA4;nc|ENSG00000041357|P25789-2|PSMA4	131.61620852596164	0.014413238321579053	6				NaN	NaN	0	NaN	9985	3640	13626
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13628	35.327	NaN	24356	30	0	6227.6	0.106				-1	 	0	87	564.3352453156173	1126.6559376980344	2	564.3375854492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9986	3640	13626
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13629	35.329	NaN	53044	30	0	8713.6	0.106			+	41661	SVRKRGKQ	8	83	479.79882440530645	957.5830958774129	2	479.7998962402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVRKRGKQ_	REV__ENST00000608113.1_1_2:55845077-55845233:+|nuORF	102.7733458925114	0.2491487235419157	6				NaN	NaN	0	NaN	9987	3640	13626
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13630	35.331	NaN	14708	30	0	2353.9	0.106	+			48222	VTAVASQGRR	10	91	522.7986473026797	1043.5827416721593	2	522.80029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTAVASQGRR_	ENST00000453348.1_1_7:1778316-1778475:-|nuORF	58.22992032128504	0.38193887838457763	6				NaN	NaN	0	NaN	9988	3640	13626
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13631	35.333	NaN	15460	30	0	3831.3	0.106				-1	 	0	85	474.27268523542375	946.5308175376475	2	474.27374267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	9989	3640	13626
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13632	35.335	NaN	22380	30	0	4226.6	0.035	+			12464	GEDKTGIVY	9	86	491.2466876792172	980.4788224252344	2	491.24774169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GEDKTGIVY_	ITGAV|p.K400T|1|0.12|ENSG00000138448|chr2:186646725-186646725|A/C|missense_variant	104.74654710444128	0.034358562718640136	6				NaN	NaN	0	NaN	9990	3640	13626
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13633	35.335	NaN	9178.5	30	0	3874.5	0.144				-1	NKQIMEKNGNN	11	76	653.312819840405	1304.61108674761	2	653.3141479492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_NKQIM(Oxidation (M))EKNGNN_	nc|ENSG00000159921|Q9Y223-2|GNE	23.52269567125451	0.7430573033454468	6				NaN	NaN	0	NaN	9991	3640	13626
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13651	35.375	NaN	27553	30	0	3594.6	0.214				-1	 	0	82	548.2860751712129	1094.5575974092258	2	548.2882080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10006	3643	13650
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13652	35.378	NaN	69462	30	0	21990	0.106	+			50015	WCEEDERKM	9	112	414.5022205495341	1240.4848322488024	3	414.503662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_WCEEDERKM(Oxidation (M))_	ENSG00000259916|ENST00000561882|AQP7B;nc|ENSG00000259916|A0A075B734|AQP7B	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	10007	3643	13650
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13653	35.38	NaN	48933	30	0	14090	0.106			+	-1	LYLMPKTY	8	100	522.7758544521946	1043.5371559711891	2	522.777587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_LYLM(Oxidation (M))PKTY_	REV__tr|U7T539|U7T539_FUSNUTetratricopeptiderepeatfamilyproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00425PE=4SV=1	50.0245360154114	0.5941082100236891	6				NaN	NaN	0	NaN	10008	3643	13650
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13654	35.382	NaN	21173	30	0	7377.8	0.106	+			22103	KSMTLLNTM	9	80	527.7679555509629	1053.5213581687258	2	527.7697143554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_KSMTLLNTM(Oxidation (M))_	ENSG00000248098|ENST00000269980|BCKDHA;nc|ENSG00000248098|P12694-2|BCKDHA	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	10009	3643	13650
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13655	35.384	NaN	7751.6	30	0	1193.2	0.106				-1	 	0	74	623.3542671851619	1244.6939814371237	2	623.3561401367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10010	3643	13650
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13656	35.386	NaN	8636.8	30	0	846.83	0.036			+	-1	DKNDWCTY	8	73	551.2187994134433	1100.4230458936865	2	551.2208862304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_DKNDWC(Carbamidomethyl (C))TY_	REV__RXRG|p.R176W|1|0.23|ENSG00000143171|chr1:165417137-165417137|G/A|missense_variant	53.351449002276354	0.5676011784961348	6				NaN	NaN	0	NaN	10011	3643	13650
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13657	35.386	NaN	12894	30	0	1062.1	0.141			+	30768	QDQRTTAGPL	10	87	543.7807749398945	1085.546996946589	2	543.782470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QDQRTTAGPL_	REV__ENSG00000186603|ENST00000334815|HPDL	26.69291269510374	0.6618461711292317	6				NaN	NaN	0	NaN	10012	3643	13650
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13675	35.426	NaN	114000	30	0	11562	0.215				-1	 	0	96	471.7887296584514	941.5629063837029	2	471.7898864746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10027	3646	13674
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13676	35.429	NaN	17251	30	0	1581.3	0.106			+	-1	CFRNMSLV	8	90	513.7479009202034	1025.4812489072067	2	513.7498779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_C(Carbamidomethyl (C))FRNMSLV_	REV__ENSG00000082497|ENST00000367012|SERTAD4;REV__ENST00000482421.1_1_1:210411290-210419944:+|nuORF	40.5726180659479	0.6527593143185008	6				NaN	NaN	0	NaN	10028	3646	13674
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13677	35.431	NaN	14633	30	0	6943.7	0.106			+	6925	CMQEASPGSFQ	11	71	621.2497788120014	1240.4850046908027	2	621.251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_C(Carbamidomethyl (C))MQEASPGSFQ_	REV__ENSG00000116584|ENST00000361247|ARHGEF2;REV__ENST00000608543.1_1_1:155932320-155932747:-|nuORF;REV__nc|ENSG00000116584|Q92974-2|ARHGEF2;REV__nc|ENSG00000116584|Q92974-3|ARHGEF2	40.77816245573522	0.5472954108598816	6				NaN	NaN	0	NaN	10029	3646	13674
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13678	35.433	NaN	16785	30	0	1379.1	0.106			+	-1	IVRMCVQKI	9	83	553.314777107419	1104.615001281638	2	553.3167114257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_IVRM(Oxidation (M))CVQKI_	REV__ENSG00000112280|ENST00000357250|COL9A1;REV__ENST00000486080.5_1_6:70926602-70955360:-|nuORF;REV__ENST00000489611.5_1_6:70926602-70990065:-|nuORF;REV__nc|ENSG00000112280|P20849-2|COL9A1	63.30626980617807	0.18605348971131092	6				NaN	NaN	0	NaN	10030	3646	13674
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13679	35.435	NaN	15501	30	0	1979.8	0.106			+	42427	TAKVGNDIIM	10	92	531.2842691709316	1060.553985408663	2	531.2869873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TAKVGNDIIM_	REV__CEMIP|p.T745A|1|0.42|ENSG00000103888|chr15:80924651-80924651|A/G|missense_variant	67.49366992349736	0.29779660154124327	6				NaN	NaN	0	NaN	10031	3646	13674
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13680	35.437	NaN	32406	30	0	4594.4	0.036	+			9934	EQVRLQRGK	9	85	557.3276372808795	1112.6407216285588	2	557.3297729492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EQVRLQRGK_	ENST00000340022.6_2_7:91874316-91874832:-|nuORF;ENST00000394507.5_2_7:91874769-91874832:-|nuORF	93.19546047674547	0.05585629608842056	6				NaN	NaN	0	NaN	10032	3646	13674
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13681	35.437	NaN	35512	30	0	7690.3	0.14				-1	 	0	92	458.24902894632714	914.4835049594543	2	458.2501525878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10033	3646	13674
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13699	35.477	NaN	38211	30	0	6513.7	0.214			+	27937	MVFILFRG	8	95	491.7803247744255	981.546096615651	2	491.7817687988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MVFILFRG_	REV__ENSG00000108556|ENST00000649488|CHRNE;REV__ENST00000572438.1_1_17:4802033-4804946:-|nuORF	37.028477286268924	0.6747514403204248	6				NaN	NaN	0	NaN	10048	3649	13698
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13700	35.48	NaN	58147	30	0	9589.4	0.106			+	26136	LSPSLGPS	8	95	379.20827657859303	756.4020002239861	2	379.20947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSPSLGPS_	REV__ENSG00000204970|ENST00000504120|PCDHA1;REV__nc|ENSG00000204970|Q9Y5I3-3|PCDHA1	37.15910966729921	0.6739408393984688	6				NaN	NaN	0	NaN	10049	3649	13698
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13701	35.483	NaN	8376.5	30	0	2421.3	0.106	+			29605	PFSSRFPL	8	71	475.75839631864613	949.5022397040923	2	475.7595520019531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PFSSRFPL_	ENST00000377387.5_1_11:64532125-64532308:-|nuORF	60.29395666154354	0.49887135096048313	6				NaN	NaN	0	NaN	10050	3649	13698
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13702	35.484	NaN	8821.8	30	0	1257.9	0.106			+	32391	QVCLLVEYKP	10	86	596.3260082529627	1190.6374635727252	2	596.327880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QVCLLVEYKP_	REV__ENSG00000148154|ENST00000374279|UGCG;REV__UGCG|p.L365Cfs*9|4|0.31|ENSG00000148154|chr9:111932900-111932900|T/-|frameshift_variant	35.15202426646627	0.5927656479315102	6				NaN	NaN	0	NaN	10051	3649	13698
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13703	35.486	NaN	6333.2	30	0	933.74	0.106	+			17254	HYCTMFHTL	9	78	576.7512708793765	1151.487988825553	2	576.753173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HYCTMFHTL_	ENSG00000172568|ENST00000312349|FNDC9;FNDC9|p.G213Wfs*2|1|0.39|ENSG00000172568|chr5:157342901-157342902|-/C|frameshift_variant	33.51558372728122	0.4900267029546261	6				NaN	NaN	0	NaN	10052	3649	13698
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13704	35.488	NaN	6659.3	30	0	469.46	0.037	+			4608	ATLLASNEAFK	11	72	582.8144511248418	1163.6143493164834	2	582.8170776367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ATLLASNEAFK_	ENSG00000185825|ENST00000345046|BCAP31;nc|ENSG00000185825|P51572-2|BCAP31	99.78786539795823	0.061125669442822994	6				NaN	NaN	0	NaN	10053	3649	13698
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13705	35.489	NaN	12652	30	0	2989.1	0.145	+			19175	IYTISGDVYI	10	67	381.86938036063003	1142.5863116820901	3	381.8706970214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IYTISGDVYI_	ENSG00000087842|ENST00000380420|PIR	29.170058357718403	0.6416167986984785	6				NaN	NaN	0	NaN	10054	3649	13698
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13723	35.528	NaN	34710	30	0	3566.5	0.214				-1	 	0	89	504.2597642811626	1006.5049756291252	2	504.26123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10069	3652	13722
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13724	35.532	NaN	10248	30	0	773.31	0.106	+			23604	LANPHELSL	9	77	497.27044819973725	992.5263434662745	2	497.2716064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LANPHELSL_	ENSG00000197312|ENST00000480945|DDI2;ENST00000486680.1_1_1:15944165-15960061:+|nuORF;nc|ENSG00000197312|Q5TDH0-2|DDI2;nc|ENSG00000197312|Q5TDH0-3|DDI2	136.26810882979174	0.012230845423532208	6				NaN	NaN	0	NaN	10070	3652	13722
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13725	35.534	NaN	24381	30	0	3146.9	0.106			+	7091	CVRNYEKF	8	93	529.7576025222253	1057.5006521112505	2	529.7590942382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_CVRNYEKF_	REV__ENST00000361283.2_1_13:115086670-115089303:+|nuORF;REV__ENST00000463003.1_1_13:115086670-115089303:+|nuORF	55.50420428727701	0.5462892107279674	6				NaN	NaN	0	NaN	10071	3652	13722
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13726	35.535	NaN	19283	30	0	2127.3	0.106	+			9871	EQGRLLRR	8	86	514.3091875065866	1026.603822079973	2	514.310791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EQGRLLRR_	ENSG00000167995|ENST00000378043|BEST1;ENST00000524877.5_1_11:61722897-61725974:+|nuORF;ENST00000529265.5_1_11:61717864-61725974:+|nuORF;nc|ENSG00000167995|O76090-3|BEST1;nc|ENSG00000167995|O76090-4|BEST1	66.42927471994793	0.4381325844043345	6				NaN	NaN	0	NaN	10072	3652	13722
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13727	35.537	NaN	10965	30	0	1805.9	0.106			+	-1	KDYMATLSM	9	79	546.2416662241635	1090.468779515127	2	546.2435913085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Oxidation (M)	_KDYM(Oxidation (M))ATLSM(Oxidation (M))_	REV__CRYBG3|p.I1970M|1|0.31|ENSG00000080200|chr3:97877104-97877104|A/G|missense_variant	58.22992032128504	0.22837015374068087	6				NaN	NaN	0	NaN	10073	3652	13722
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13728	35.539	NaN	7023.6	30	0	817.92	0.033	+			16874	HPGRGARL	8	63	432.25152346237314	862.4884939915463	2	432.25262451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HPGRGARL_	ENSG00000180042|ENST00000572493|OR1R1P	62.97842346883844	0.4722955155785405	6				NaN	NaN	0	NaN	10074	3652	13722
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13729	35.54	NaN	6604.8	30	0	883.49	0.142	+			29336	NYTKAMRLF	9	81	572.3009414992817	1142.5873300653634	2	572.302978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NYTKAMRLF_	ENSG00000182551|ENST00000327435|ADI1;nc|ENSG00000182551|Q9BV57-2|ADI1	85.86182877749512	0.07653218437724067	6				NaN	NaN	0	NaN	10075	3652	13722
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13747	35.579	NaN	63533	30	0	12494	0.214				-1	 	0	72	440.76474794147435	879.5149429497487	2	440.7658996582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10090	3655	13746
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13748	35.582	NaN	24476	30	0	2489	0.106				-1	 	0	87	480.272635500229	958.530718067258	2	480.2736511230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10091	3655	13746
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13749	35.585	NaN	20809	30	0	1970	0.106			+	17062	HRAFRPEQ	8	82	520.772552411395	1039.53055188959	2	520.7743530273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HRAFRPEQ_	REV__ENSG00000189350|ENST00000379558|TOGARAM2	58.78195531508484	0.5138399468736706	6				NaN	NaN	0	NaN	10092	3655	13746
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13750	35.586	NaN	21751	30	0	2347	0.106	+			8093	DWRLGVIK	8	85	493.79475452657624	985.5749561199525	2	493.7972106933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DWRLGVIK_	ENSG00000146755|ENST00000333149|TRIM50;nc|ENSG00000146755|Q86XT4-2|TRIM50	64.20726635412375	0.4601301477144759	6				NaN	NaN	0	NaN	10093	3655	13746
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13751	35.588	NaN	17234	30	0	6949.7	0.106				-1	 	0	80	505.81423765843937	1009.6139223836788	2	505.8155212402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10094	3655	13746
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13752	35.59	NaN	10355	30	0	3575.2	0.037			+	19329	KAIMGVIRKM	10	60	382.89955480437675	1145.6768350133302	3	382.9007568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KAIMGVIRKM_	REV__AP3B1|p.E758Dfs*25|1|0.05|ENSG00000132842|chr5:78110330-78110331|-/GTTGTAATTGAAGGTAAATA|frameshift_variant;REV__AP3B1|p.K923Nfs*4|5|0.24|ENSG00000132842|chr5:78039083-78039083|T/-|frameshift_variant;REV__AP3B1|p.S141Kfs*3|1|0.56|ENSG00000132842|chr5:78227486-78227487|-/T|frameshift_variant;REV__ENSG00000132842|ENST00000255194|AP3B1;REV__nc|ENSG00000132842|O00203-3|AP3B1	27.047317107675042	0.6589519614906109	6				NaN	NaN	0	NaN	10095	3655	13746
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13753	35.591	NaN	15140	30	0	1225.2	0.141	+			11575	FPMTHGNTGF	10	95	554.7498984313628	1107.4852439295255	2	554.7481689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FPMTHGNTGF_	ENSG00000197111|ENST00000546463|PCBP2;ENST00000517662.1_1_8:75515525-75516083:-|nuORF;ENST00000547717.1_1_12:53848575-53861193:+|nuORF;ENST00000547987.2_1_12:53854819-53861193:+|nuORF;nc|ENSG00000197111|Q15366-2|PCBP2;nc|ENSG00000197111|Q15366-4|PCBP2;nc|ENSG00000197111|Q15366-5|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;nc|ENSG00000197111|Q15366-7|PCBP2;nc|ENSG00000197111|Q15366-8|PCBP2;nc|ENSG00000197111|Q15366|PCBP2	76.16968421966216	0.22691431239609447	6				NaN	NaN	0	NaN	10096	3655	13746
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13771	35.63	NaN	82706	30	0	14219	0.214	+			6491	AWARSKNPQ	9	100	529.2803726390555	1056.5461923449109	2	529.2822875976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AWARSKNPQ_	ENSG00000112159|ENST00000369393|MDN1;MDN1|p.L5278Ffs*6|1|0.18|ENSG00000112159|chr6:89652273-89652274|-/A|frameshift_variant	51.19269402634007	0.2889735674168909	6				NaN	NaN	0	NaN	10111	3658	13770
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13772	35.634	NaN	28199	30	0	10172	0.106	+			13165	GGVGIPTI	8	63	357.2134988795092	712.4124448258184	2	357.21453857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GGVGIPTI_	CSNK1D|p.R358Gfs*12|1|0.25|ENSG00000141551|chr17:82249000-82249000|G/-|frameshift_variant;CSNK1D|p.T344Hfs*26|1|0.26|ENSG00000141551|chr17:82249459-82249459|G/-|frameshift_variant;ENSG00000141551|ENST00000314028|CSNK1D;ENST00000579316.5_1_17:80213289-80231257:-|nuORF;ENST00000584472.5_1_17:80213174-80231257:-|nuORF;nc|ENSG00000141551|P48730-2|CSNK1D	19.359975847455235	0.7988239741663654	6				NaN	NaN	0	NaN	10112	3658	13770
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13773	35.636	NaN	39725	30	0	4419.2	0.106				-1	 	0	93	524.7912432663716	1047.567933599543	2	524.79296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10113	3658	13770
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13774	35.637	NaN	9454.7	30	0	2848.1	0.106	+			38340	SRKTTEKLL	9	61	359.2206080538182	1074.6399947616546	3	359.2217712402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SRKTTEKLL_	ENSG00000134899|ENST00000652225|ERCC5;ENST00000375958.3_1_13:103498616-103506268:+|nuORF;ERCC5|p.T112I|1|0.06|ENSG00000134899|chr13:102853827-102853827|C/T|missense_variant;nc|ENSG00000134899|P28715-3|ERCC5	31.529811441608018	0.5085848003137583	6				NaN	NaN	0	NaN	10114	3658	13770
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13775	35.639	NaN	27405	30	0	2639.1	0.106	+			40112	STPGTVHTTK	10	89	514.7722064636696	1027.529859994139	2	514.773681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STPGTVHTTK_	MUC5B|p.A3860V|1|0.07|ENSG00000117983|chr11:1248459-1248459|C/T|missense_variant	75.04331003522576	0.23611669241777622	6				NaN	NaN	0	NaN	10115	3658	13770
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13776	35.641	NaN	7069.1	30	0	1397.4	0.035			+	30530	QAILPQQPL	9	56	336.5344378546052	NaN	0	336.5342102050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QAILPQQPL_	REV__ENSG00000160298|ENST00000291691|C21orf58;REV__nc|nan|P58505-2|C21orf58;REV__nc|nan|P58505-3|C21orf58	24.20275056022122	0.35506675290109213	6				NaN	NaN	0	NaN	10116	3658	13770
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13777	35.642	NaN	13909	30	0	1196.6	0.141	+			10034	ESAKPGTKSGF	11	94	554.7858396193035	1107.5571263054069	2	554.7874145507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ESAKPGTKSGF_	ENSG00000124789|ENST00000262077|NUP153;nc|ENSG00000124789|P49790-2|NUP153;nc|ENSG00000124789|P49790-3|NUP153;NUP153|p.E1073Kfs*44|1|0.07|ENSG00000124789|chr6:17628983-17628983|T/-|frameshift_variant	67.49366992349736	0.25663419177724	6				NaN	NaN	0	NaN	10117	3658	13770
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13795	35.681	NaN	51151	30	0	9872	0.214				-1	 	0	91	479.78048837085544	957.5464238085109	2	479.78155517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10132	3661	13794
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13796	35.684	NaN	34311	30	0	3676	0.106	+			38569	SSFGNMIYK	9	93	523.7515583458871	1045.4885637585742	2	523.7525024414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSFGNMIYK_	ENSG00000120137|ENST00000239231|PANK3	98.58198989935565	0.04066992115528678	6				NaN	NaN	0	NaN	10133	3661	13794
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13797	35.686	NaN	14760	30	0	4171.1	0.106			+	-1	VANNRRPN	8	68	491.76233196108865	981.5101109889773	2	491.7635498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))VANNRRPN_	REV__ENST00000559858.5_1_10:31608163-31644080:+|nuORF	33.51558372728122	0.7005509609380386	6				NaN	NaN	0	NaN	10134	3661	13794
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13798	35.688	NaN	18131	30	0	2371.7	0.106	+			24627	LGSLEVGVSL	10	83	487.28115120362594	972.5477494740519	2	487.2879943847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LGSLEVGVSL_	ENST00000474033.5_1_1:1288405-1288789:-|nuORF	84.9155231211612	0.16018353804806162	6				NaN	NaN	0	NaN	10135	3661	13794
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13799	35.69	NaN	12124	30	0	2694.9	0.106				-1	 	0	79	564.3352453156173	1126.6559376980344	2	564.3372192382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10136	3661	13794
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13800	35.692	NaN	17460	30	0	1124.2	0.106			+	50186	WLLRFPAP	8	83	500.2951016978086	NaN	0	500.2950134277344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_WLLRFPAP_	REV__ENSG00000006327|ENST00000326577|TNFRSF12A;REV__ENST00000575124.1_1_16:3070552-3071824:+|nuORF;REV__nc|ENSG00000006327|Q9NP84-2|TNFRSF12A	62.97842346883844	1.7418937515398478	6				NaN	NaN	0	NaN	10137	3661	13794
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13801	35.693	NaN	52057	30	0	9133.6	0.036	+			27486	MLVRCVVRS	9	93	539.7965632289423	1077.5785735246845	2	539.798583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_M(Oxidation (M))LVRCVVRS_	PDCD11|p.S154R|1|0.26|ENSG00000148843|chr10:103405079-103405079|A/C|missense_variant	71.87747018426188	0.13267044672804276	6				NaN	NaN	0	NaN	10138	3661	13794
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13819	35.731	NaN	220290	30	0	23766	0.156			+	-1	KLSFREMC	8	93	535.759637779232	1069.5047226252639	2	535.7612915039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_KLSFREMC(Carbamidomethyl (C))_	REV__ENST00000523377.1_1_6:90344797-90344881:-|nuORF	51.33545320467046	0.5859736979383976	6				NaN	NaN	0	NaN	10153	3664	13818
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13820	35.734	NaN	54911	30	0	5066.3	0.106	+			21353	KMAFWMSL	8	87	507.25057571530317	1012.4865984974064	2	507.25201416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KMAFWMSL_	ENSG00000172824|ENST00000648724|CES4A;ENST00000535543.5_1_16:67034893-67043042:+|nuORF;ENST00000543561.1_1_16:67040205-67043042:+|nuORF;ENST00000544478.1_1_16:67040601-67043042:+|nuORF;nc|ENSG00000172824|Q5XG92-2|CES4A;nc|ENSG00000172824|Q5XG92-4|CES4A;nc|ENSG00000172824|Q5XG92-6|CES4A	97.47269410471826	0.25484828363392314	6				NaN	NaN	0	NaN	10154	3664	13818
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13821	35.736	NaN	41269	30	0	10767	0.106			+	25861	LSFGRVPVT	9	82	488.283172605709	974.551792278218	2	488.2846374511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSFGRVPVT_	REV__ENSG00000163738|ENST00000325278|MTHFD2L;REV__ENST00000423607.5_1_4:75023855-75040225:+|nuORF;REV__ENST00000461101.1_1_4:75023855-75025862:+|nuORF;REV__nc|ENSG00000163738|Q9H903-5|MTHFD2L	32.81241826257853	0.4965981579233955	6				NaN	NaN	0	NaN	10155	3664	13818
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13822	35.737	NaN	12915	30	0	952.63	0.106	+			48554	VTPAAFWVT	9	91	496.26719619339536	990.5198394535907	2	496.2684326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTPAAFWVT_	ENSG00000205038|ENST00000378402|PKHD1L1	96.19043198914106	0.047412499214244314	6				NaN	NaN	0	NaN	10156	3664	13818
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13823	35.739	NaN	13790	30	0	2258.8	0.106			+	13306	GKFFLNMLTK	10	87	599.8357343366624	1197.6569157401248	2	599.8374633789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GKFFLNMLTK_	REV__ENSG00000186862|ENST00000619208|PDZD7;REV__ENST00000474125.6_1_10:102771704-102781716:-|nuORF;REV__nc|ENSG00000186862|Q9H5P4-1|PDZD7;REV__nc|ENSG00000186862|Q9H5P4-2|PDZD7	61.76455937419982	0.3497917639301274	6				NaN	NaN	0	NaN	10157	3664	13818
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13824	35.741	NaN	11228	30	0	1475	0.106			+	15079	GTQAAYSHHTL	11	72	593.2851851719595	1184.5558174107189	2	593.2869262695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTQAAYSHHTL_	REV__ENST00000488564.2_1_7:27881117-27881465:+|nuORF	56.43379154798735	0.3552884390983883	6				NaN	NaN	0	NaN	10158	3664	13818
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13825	35.743	NaN	32147	30	0	7650.2	0.034			+	35450	SASLLRER	8	78	466.27030328616	930.52605363912	2	466.2710266113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SASLLRER_	REV__ENSG00000106665|ENST00000223398|CLIP2;REV__nc|ENSG00000106665|Q9UDT6-2|CLIP2	47.657333605630114	0.6087971902037268	6				NaN	NaN	0	NaN	10159	3664	13818
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13843	35.778	NaN	164040	30	0	53666	0.214				-1	 	0	96	520.3093032948244	1038.6040536564487	2	520.3112182617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10174	3667	13842
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13844	35.781	NaN	31283	30	0	3334	0.106	+			42309	TAFDVAEKY	9	86	522.2544500294466	1042.4943471256931	2	522.2562866210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAFDVAEKY_	ENSG00000072110|ENST00000394419|ACTN1;ENST00000554508.5_1_14:69367621-69387744:-|nuORF;nc|ENSG00000072110|P12814-2|ACTN1;nc|ENSG00000072110|P12814-4|ACTN1;nc|ENSG00000072110|P12814|ACTN1	85.86182877749512	0.07653218437724067	6				NaN	NaN	0	NaN	10175	3667	13842
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13845	35.783	NaN	29646	30	0	4808.1	0.106			+	29818	PKNPRGRY	8	92	494.27722222205114	986.5398915109023	2	494.27911376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PKNPRGRY_	REV__ENST00000398621.3_1_10:81652047-81652404:-|nuORF	24.20275056022122	0.7724576178584145	6				NaN	NaN	0	NaN	10176	3667	13842
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13846	35.785	NaN	9536.2	30	0	1108.8	0.106			+	-1	VFYRYDHM	8	76	573.7553789032764	1145.4962048733528	2	573.7578735351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_VFYRYDHM(Oxidation (M))_	REV__ADAM18|p.N559Mfs*23|1|0.28|ENSG00000168619|chr8:39680077-39680077|A/-|frameshift_variant;REV__ENSG00000168619|ENST00000265707|ADAM18;REV__nc|ENSG00000168619|Q9Y3Q7-2|ADAM18	50.0245360154114	0.5941082100236891	6				NaN	NaN	0	NaN	10177	3667	13842
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13847	35.787	NaN	10902	30	0	1135.4	0.106	+			6866	CLALAWTLL	9	93	502.2856692027147	1002.5567854722294	2	502.2872009277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_CLALAWTLL_	ENSG00000137857|ENST00000389037|DUOX1	76.7741389293348	0.11149722112137898	6				NaN	NaN	0	NaN	10178	3667	13842
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13848	35.789	NaN	6674.9	30	0	1247.9	0.033			+	44196	TREIGAVL	8	59	429.7555256401416	NaN	0	429.75567626953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TREIGAVL_	REV__ENSG00000136114|ENST00000258613|THSD1;REV__nc|ENSG00000136114|Q9NS62-2|THSD1	40.5726180659479	1.7418937515398478	6				NaN	NaN	0	NaN	10179	3667	13842
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13849	35.789	NaN	7075	30	0	1296	0.142			+	-1	NLLQRQAMK	9	78	373.20987774270935	NaN	0	373.2099304199219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_NLLQRQAM(Oxidation (M))K_	REV__ENSG00000087206|ENST00000511320|UIMC1;REV__ENST00000503273.1_1_5:176338353-176395858:-|nuORF;REV__nc|ENSG00000087206|Q96RL1-3|UIMC1	24.519189625965996	0.35377483217337163	6				NaN	NaN	0	NaN	10180	3667	13842
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13867	35.826	NaN	13045	30	0	1408.3	0.215	+			240	AAMKALQAL	9	83	458.76668366095294	915.5188143887059	2	458.76751708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AAMKALQAL_	ENSG00000040341|ENST00000524300|STAU2;ENST00000521451.5_1_8:74528012-74659064:-|nuORF;nc|ENSG00000040341|Q9NUL3-2|STAU2;nc|ENSG00000040341|Q9NUL3-3|STAU2;nc|ENSG00000040341|Q9NUL3-7|STAU2;nc|ENSG00000040341|Q9NUL3-8|STAU2;STAU2|p.C491Lfs*31|1|0.39|ENSG00000040341|chr8:73552072-73552073|-/G|frameshift_variant;STAU2|p.K274Nfs*22|1|0.09|ENSG00000040341|chr8:73613813-73613813|T/-|frameshift_variant;STAU2|p.K410Ifs*9|1|0.07|ENSG00000040341|chr8:73552313-73552314|-/A|frameshift_variant;STAU2|p.L259Tfs*15|2|0.48|ENSG00000040341|chr8:73613860-73613861|-/T|frameshift_variant	133.8126618989323	0.013382794002272486	6				NaN	NaN	0	NaN	10195	3670	13866
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13868	35.83	NaN	12964	30	0	1068.3	0.106	+			12800	GELYNEVKV	9	85	525.778549192979	NaN	0	525.777099609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GELYNEVKV_	ENSG00000090273|ENST00000321265|NUDC	92.23892857375223	0.037083009022581055	6				NaN	NaN	0	NaN	10196	3670	13866
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13869	35.832	NaN	13407	30	0	4746.1	0.106				-1	TMILTSKI	8	71	461.76925685613077	921.5239607790616	2	461.77105712890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_TM(Oxidation (M))ILTSKI_	ENSG00000183269|ENST00000537935|OR52E8;ENSG00000205409|ENST00000329322|OR52E6;OR52E6|p.C181Tfs*72|1|0.05|ENSG00000205409|chr11:5841357-5841358|-/TTGGT|frameshift_variant;OR52E8|p.F257Lfs*9|1|0.28|ENSG00000183269|chr11:5856932-5856932|A/-|frameshift_variant	38.80614096846853	0.6637206697844082	6				NaN	NaN	0	NaN	10197	3670	13866
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13870	35.833	NaN	10224	30	0	4978.8	0.106			+	47599	VRRPVKKK	8	65	337.569589229963	1009.6869382900891	3	337.57037353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VRRPVKKK_	REV__ENSG00000151327|ENST00000280987|FAM177A1;REV__nc|ENSG00000151327|Q8N128|FAM177A1	10.865556482863946	0.7853885997566867	6				NaN	NaN	0	NaN	10198	3670	13866
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13871	35.835	NaN	14144	30	0	925.97	0.106	+			10817	FANETLRTL	9	85	532.7900959575377	NaN	0	532.7902221679688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FANETLRTL_	ATP8B1|p.I809Nfs*11|1|0.61|ENSG00000081923|chr18:57661455-57661456|-/T|frameshift_variant;ATP8B1|p.P792Hfs*8|1|0.34|ENSG00000081923|chr18:57662528-57662528|A/-|frameshift_variant;ENSG00000081923|ENST00000648908|ATP8B1	78.26377905018397	0.07733306720594871	6				NaN	NaN	0	NaN	10199	3670	13866
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13872	35.837	NaN	6198.7	30	0	1282.7	0.106	+			36195	SELLAYLAAY	10	78	557.2933920287564	1112.5722311243128	2	557.2949829101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SELLAYLAAY_	nc|ENSG00000204084|P32019-4|INPP5B	45.9519527083369	0.4943008177357963	6				NaN	NaN	0	NaN	10200	3670	13866
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13873	35.839	NaN	9258.7	30	0	1312.9	0.036	+			7363	DDIITNRCF	9	76	548.7579248434004	1095.5012967536006	2	548.7608032226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DDIITNRCF_	ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC;PRKDC|p.K3681Nfs*6|1|0.32|ENSG00000253729|chr8:47785174-47785177|TTCT/-|frameshift_variant;PRKDC|p.M3670*|1|0.5|ENSG00000253729|chr8:47785212-47785212|T/-|frameshift_variant;PRKDC|p.M3846Cfs*12|1|0.13|ENSG00000253729|chr8:47779047-47779047|T/-|frameshift_variant;PRKDC|p.M4020Cfs*2|1|0.31|ENSG00000253729|chr8:47776968-47776968|T/-|frameshift_variant;PRKDC|p.N3605Kfs*3|1|0.22|ENSG00000253729|chr8:47788993-47788994|-/T|frameshift_variant;PRKDC|p.N4037Ifs*15|1|0.17|ENSG00000253729|chr8:47776916-47776916|T/-|frameshift_variant;PRKDC|p.S3402Ifs*16|1|0.04|ENSG00000253729|chr8:47799302-47799303|-/AAACCGTGAGTTAGAGGAGGTAA|frameshift_variant;PRKDC|p.S4099Qfs*6|1|0.25|ENSG00000253729|chr8:47774265-47774265|A/-|frameshift_variant;PRKDC|p.T3268Pfs*7|1|0.5|ENSG00000253729|chr8:47803426-47803426|T/-|frameshift_variant;PRKDC|p.W3401Cfs*4|1|0.01|ENSG00000253729|chr8:47799304-47799305|-/AATGAATA|frameshift_variant	54.776311868738084	0.25715957988447635	6				NaN	NaN	0	NaN	10201	3670	13866
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13891	35.875	NaN	16041	30	0	1121	0.214	+			11044	FEMATRAAL	9	74	505.2591237650475	1008.503694596895	2	505.2607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FEMATRAAL_	ENSG00000067560|ENST00000418115|RHOA	96.0336014099291	0.047854655524928534	6				NaN	NaN	0	NaN	10216	3673	13890
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13892	35.879	NaN	23687	30	0	1630.9	0.106			+	32421	QVGVQYWSY	9	86	565.2693320867944	1128.5241112403887	2	565.2716674804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QVGVQYWSY_	REV__nc|ENSG00000138653|Q9H3R1-2|NDST4	79.45101966838831	0.09992237243120712	6				NaN	NaN	0	NaN	10217	3673	13890
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13893	35.881	NaN	8915.5	30	0	888.78	0.106				-1	 	0	70	498.27270785044533	994.5308627676907	2	498.2740478515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10218	3673	13890
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13894	35.882	NaN	10520	30	0	933.03	0.106				-1	 	0	77	488.8117034496338	975.6088539660676	2	488.8130187988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10219	3673	13890
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13895	35.884	NaN	19978	30	0	6170.2	0.106			+	41293	SVLLPMPVL	9	91	484.7965473998557	967.5785418665114	2	484.7982177734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVLLPMPVL_	REV__ENSG00000236699|ENST00000420470|ARHGEF38	42.47446043378293	0.39123495718708534	6				NaN	NaN	0	NaN	10220	3673	13890
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13896	35.886	NaN	17943	30	0	3641.7	0.106	+			11237	FIIDSSRSV	9	84	512.2770715633659	NaN	0	512.2771606445312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FIIDSSRSV_	ENSG00000132031|ENST00000407540|MATN3;ENSG00000132561|ENST00000254898|MATN2;MATN3|p.T387Hfs*10|2|0.28|ENSG00000132031|chr2:20000450-20000450|T/-|frameshift_variant;nc|ENSG00000132031|O15232-2|MATN3;nc|ENSG00000132561|O00339-2|MATN2;nc|ENSG00000132561|O00339-3|MATN2	104.01359247289065	0.015103351932921906	6				NaN	NaN	0	NaN	10221	3673	13890
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13897	35.888	NaN	9850.5	30	0	1523.9	0.034				-1	LSARPWGL	8	73	471.26434022760793	940.5141275220159	2	471.2662658691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LSARPWGL_	ENST00000169298.7_1_3:186793708-186793933:+|nuORF	50.0245360154114	0.5941082100236891	6				NaN	NaN	0	NaN	10222	3673	13890
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13915	35.925	NaN	46227	30	0	15902	0.214	+			10939	FDTCEAERK	9	95	549.7481582471875	1097.4817635611748	2	549.7503662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FDTCEAERK_	CEP128|p.I749Ffs*9|1|0.42|ENSG00000100629|chr14:80778013-80778013|T/-|frameshift_variant;ENSG00000100629|ENST00000555265|CEP128;nc|ENSG00000100629|Q6ZU80-1|CEP128	107.00750918261382	0.032051501805654005	6				NaN	NaN	0	NaN	10237	3676	13914
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13916	35.928	NaN	29953	30	0	7145	0.106			+	-1	TGMIKVGNK	9	78	482.26881216504063	962.5230713968813	2	482.26983642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_TGM(Oxidation (M))IKVGNK_	REV__ENSG00000021826|ENST00000233072|CPS1;REV__nc|ENSG00000021826|P31327-2|CPS1;REV__nc|ENSG00000021826|P31327-3|CPS1	52.936696900407355	0.27249468807391813	6				NaN	NaN	0	NaN	10238	3676	13914
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13917	35.93	NaN	20179	30	0	2446.9	0.106				-1	 	0	84	505.8508474150094	1009.6871418968188	2	505.8521423339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10239	3676	13914
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13918	35.932	NaN	11707	30	0	4777.9	0.106			+	18131	ILGPFVGEKGN	11	61	377.5452059951854	1129.6137885857563	3	377.5462341308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ILGPFVGEKGN_	REV__ENSG00000001084|ENST00000650454|GCLC	20.94693142431847	0.7700749696703488	6				NaN	NaN	0	NaN	10240	3676	13914
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13919	35.934	NaN	12989	30	0	2439.4	0.106			+	43314	TGAGAKRRH	9	68	477.27295633031054	952.5313597274211	2	477.27386474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TGAGAKRRH_	REV__ENST00000356522.4_1_1:208061224-208062051:-|nuORF	99.37495909608758	0.03983967222258828	6				NaN	NaN	0	NaN	10241	3676	13914
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13920	35.936	NaN	6898.6	30	0	2056.3	0.038			+	-1	PFIRCHYFS	9	79	613.7947583740843	1225.5749638149684	2	613.7938232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_PFIRC(Carbamidomethyl (C))HYFS_	REV__ENST00000540779.1_1_12:122359430-122370014:+|nuORF;REV__nc|ENSG00000158023|Q8TBY9-3|CFAP251	55.50420428727701	0.2510918378945873	6				NaN	NaN	0	NaN	10242	3676	13914
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13921	35.936	NaN	7815.4	30	0	2380.5	0.14				-1	 	0	59	412.8008019546653	823.5870509761306	2	412.8017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10243	3676	13914
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13938	35.973	NaN	28433	30	0	3889.3	0.214				-1	 	0	82	422.26736457930195	842.5201762254039	2	422.2684020996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10257	3679	13937
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13939	35.976	NaN	34374	30	0	2676.4	0.106			+	34094	RSQASSFGAF	10	98	529.2574066793077	1056.5002604254153	2	529.25927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RSQASSFGAF_	REV__ENSG00000042062|ENST00000327979|RIPOR3;REV__ENST00000462493.1_1_20:49214115-49253138:-|nuORF;REV__nc|ENSG00000042062|Q96MK2-2|RIPOR3;REV__nc|ENSG00000042062|Q96MK2|RIPOR3	51.19269402634007	0.44601001148513897	6				NaN	NaN	0	NaN	10258	3679	13937
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13940	35.978	NaN	19293	30	0	3702.5	0.106			+	8454	EARSSPASSL	10	88	502.75449869305066	1003.4944444529013	2	502.755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EARSSPASSL_	REV__ENSG00000100319|ENST00000344318|ZMAT5	82.7504851949679	0.1731497355276012	6				NaN	NaN	0	NaN	10259	3679	13937
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13941	35.98	NaN	25069	30	0	6661.2	0.106				-1	 	0	73	447.2569113495835	892.499269765967	2	447.2579650878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10260	3679	13937
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13942	35.982	NaN	16373	30	0	1496.6	0.106			+	24869	LKEYLKEY	8	77	543.2994848105243	1084.5844166878485	2	543.3033447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LKEYLKEY_	REV__ENSG00000108854|ENST00000262435|SMURF2;REV__ENSG00000198742|ENST00000361368|SMURF1;REV__ENST00000582081.5_1_17:62541968-62590137:-|nuORF;REV__nc|ENSG00000198742|Q9HCE7|SMURF1	77.31757898189308	0.345924878368729	6				NaN	NaN	0	NaN	10261	3679	13937
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13943	35.984	NaN	11190	30	0	749.79	0.036	+			27232	MEKVLAGETL	10	83	545.794923636896	1089.5752943405919	2	545.7948608398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MEKVLAGETL_	ENSG00000129351|ENST00000588657|ILF3;ENST00000587928.5_1_19:10781281-10792148:+|nuORF;nc|ENSG00000129351|Q12906-2|ILF3;nc|ENSG00000129351|Q12906-3|ILF3;nc|ENSG00000129351|Q12906-4|ILF3;nc|ENSG00000129351|Q12906-5|ILF3;nc|ENSG00000129351|Q12906-6|ILF3;nc|ENSG00000129351|Q12906|ILF3	128.3478880297481	0.01553957493207534	6				NaN	NaN	0	NaN	10262	3679	13937
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13944	35.984	NaN	13863	30	0	2373.3	0.141				-1	SMPYHVCTL	9	88	554.2517777164894	NaN	0	554.2518920898438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_SMPYHVC(Carbamidomethyl (C))TL_	ENSG00000025796|ENST00000369002|SEC63	56.72105179125745	0.16330365735109603	6				NaN	NaN	0	NaN	10263	3679	13937
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13962	36.024	NaN	65825	30	0	6003.6	0.214			+	32076	QSCKNKSSGIE	11	95	590.7853875307151	1179.55622212823	2	590.787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QSCKNKSSGIE_	REV__ENSG00000170396|ENST00000302277|ZNF804A;REV__ZNF804A|p.A1114Rfs*17|1|0.1|ENSG00000170396|chr2:184938703-184938704|-/TGCAGCAGCACGCTGCAGCTGC|frameshift_variant;REV__ZNF804A|p.K601Sfs*44|1|0.35|ENSG00000170396|chr2:184937193-184937193|A/-|frameshift_variant	106.68306549817024	0.04687082315084998	6				NaN	NaN	0	NaN	10278	3682	13961
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13963	36.027	NaN	37239	30	0	5923.7	0.106			+	27277	MFSLASVPTF	10	90	550.2782041800366	1098.541855426873	2	550.2802124023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MFSLASVPTF_	REV__tr|U7SJW1|U7SJW1_FUSNUFerrousirontransportproteinBOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02106PE=3SV=1	76.7741389293348	0.22197596950688292	6				NaN	NaN	0	NaN	10279	3682	13961
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13964	36.029	NaN	34631	30	0	12768	0.106			+	-1	MELCRKKF	8	97	564.288543342016	1126.562533750832	2	564.2902221679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))ELC(Carbamidomethyl (C))RKKF_	REV__tr|U7SYE8|U7SYE8_FUSNUFAD-bindingFR-typedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00839PE=4SV=1	76.84663266511073	0.3498490246073164	6				NaN	NaN	0	NaN	10280	3682	13961
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13965	36.031	NaN	13590	30	0	1311.5	0.106	+			47959	VSMLNVYLK	9	77	541.7974700606724	1081.5803871881446	2	541.7996215820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_VSM(Oxidation (M))LNVYLK_	ENSG00000111775|ENST00000229379|COX6A1;ENST00000550009.1_1_12:120875908-120876378:+|nuORF	124.08010499294276	0.018729767491916592	6				NaN	NaN	0	NaN	10281	3682	13961
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13966	36.033	NaN	8920.5	30	0	1139.1	0.106	+			29475	PCRHILAL	8	71	461.76925685613077	921.5239607790616	2	462.269287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PCRHILAL_	ENSG00000132801|ENST00000255152|ZSWIM3	49.21078951299608	0.5991576752473486	6				NaN	NaN	0	NaN	10282	3682	13961
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13967	36.035	NaN	9350	30	0	1561.3	0.036				-1	MDMRVPAQL	9	79	538.7653071463221	NaN	0	538.7650146484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_M(Oxidation (M))DMRVPAQL_	nc|ENSG00000211633|A0A075B6H8|IGKV1D-42;nc|ENSG00000239819|A0A087WSZ0|IGKV1D-8;nc|ENSG00000239855|A0A0C4DH72|IGKV1-6;nc|ENSG00000240382|P01599|IGKV1-17;nc|ENSG00000241755|A0A0C4DH69|IGKV1-9;nc|ENSG00000242076|P01594|IGKV1-33;nc|ENSG00000242766|A0A075B6S4|IGKV1D-17;nc|ENSG00000243290|A0A0C4DH73|IGKV1-12;nc|ENSG00000243466|P01602|IGKV1-5;nc|ENSG00000244575|A0A075B6S5|IGKV1-27;nc|ENSG00000250036|P0DSN7|IGKV1D-37;nc|ENSG00000251546|P04432|IGKV1D-39;nc|ENSG00000276566|P0DP09|IGKV1-13	51.19269402634007	0.19847346126499396	6				NaN	NaN	0	NaN	10283	3682	13961
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13968	36.035	NaN	10038	30	0	1010.6	0.139				-1	 	0	65	407.75397484292	813.49339675264	2	407.75506591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10284	3682	13961
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13986	36.075	NaN	30831	30	0	3421.7	0.214				-1	 	0	94	483.76511975434335	965.5156865754867	2	483.76629638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10299	3685	13985
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13987	36.078	NaN	13259	30	0	721.63	0.106				-1	ICLQTCVHP	9	84	535.759637779232	1069.5047226252639	2	535.7617797851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_IC(Carbamidomethyl (C))LQTCVHP_	ENSG00000118518|ENST00000368314|RNF146;nc|ENSG00000118518|Q9NTX7-2|RNF146;RNF146|p.A38V|1|0.35|ENSG00000118518|chr6:127286726-127286726|C/T|missense_variant	51.33545320467046	0.2872990594074956	6				NaN	NaN	0	NaN	10300	3685	13985
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13988	36.08	NaN	24254	30	0	4036	0.106			+	10082	ESIVRGRND	9	82	523.2727709099357	1044.5309888866714	2	523.2747802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ESIVRGRND_	REV__ENSG00000204480|ENST00000376101|PRAMEF19	56.72105179125745	0.24094814563026265	6				NaN	NaN	0	NaN	10301	3685	13985
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13989	36.082	NaN	12022	30	0	1413.8	0.106	+			49724	VYNENLVHM	9	89	559.7690137029454	1117.5234744726906	2	559.7692260742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VYNENLVHM_	ENSG00000116752|ENST00000369541|BCAS2;ENST00000425064.1_1_1:100858662-100858893:-|nuORF	87.69643885390035	0.07135982304947239	6				NaN	NaN	0	NaN	10302	3685	13985
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13990	36.084	NaN	5437.7	30	0	1636.9	0.106			+	37234	SKRLASSAM	9	71	475.75839631864613	949.5022397040923	2	475.7597351074219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SKRLASSAM_	REV__ENSG00000185104|ENST00000396153|FAF1	32.81241826257853	0.4965981579233955	6				NaN	NaN	0	NaN	10303	3685	13985
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13991	36.086	NaN	9190.2	30	0	608.71	0.036			+	-1	QEEVCSQKT	9	76	554.7498984313628	1107.4852439295255	2	554.7514038085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_QEEVC(Carbamidomethyl (C))SQKT_	REV__ENSG00000152595|ENST00000361056|MEPE;REV__nc|ENSG00000152595|Q9NQ76-2|MEPE	39.252832667884924	0.4290233611298554	6				NaN	NaN	0	NaN	10304	3685	13985
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	13992	36.086	NaN	7346	30	0	1094.7	0.14	+			30724	QDISWHIK	8	72	513.7723387545101	NaN	0	513.7717895507812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QDISWHIK_	ENST00000358015.7_1_9:110093006-110093297:+|nuORF	82.24051045832904	1.7418937515398478	6				NaN	NaN	0	NaN	10305	3685	13985
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14010	36.126	NaN	36158	30	0	10577	0.215			+	34425	RTTRHQKL	8	91	520.3093032948244	1038.6040536564487	2	520.3115844726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTTRHQKL_	REV__ENSG00000163754|ENST00000345003|GYG1;REV__ENST00000478067.1_1_3:148709334-148714532:+|nuORF;REV__GYG1|p.S230Cfs*4|1|0.29|ENSG00000163754|chr3:149024128-149024129|AA/-|frameshift_variant;REV__nc|ENSG00000163754|P46976-2|GYG1;REV__nc|ENSG00000163754|P46976-3|GYG1	40.77816245573522	0.6514838689002179	6				NaN	NaN	0	NaN	10320	3688	14009
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14011	36.129	NaN	26242	30	0	6116.6	0.106			+	11438	FLVYNIMSP	9	93	542.2816225791559	1082.5486922251116	2	542.2832641601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FLVYNIMSP_	REV__ZNF350|p.V520M|1|0.33|ENSG00000256683|chr19:51964895-51964895|C/T|missense_variant	60.97194046774394	0.20551255781574032	6				NaN	NaN	0	NaN	10321	3688	14009
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14012	36.131	NaN	13098	30	0	2725.2	0.106	+			9279	EHKGELQTDK	10	76	592.7992366690836	1183.583920404967	2	592.801513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EHKGELQTDK_	ENSG00000113645|ENST00000265293|WWC1;ENST00000518204.1_1_5:167894814-167896019:+|nuORF;ENST00000521391.1_1_5:167891940-167899269:+|nuORF;nc|ENSG00000113645|Q8IX03-2|WWC1	51.19269402634007	0.44601001148513897	6				NaN	NaN	0	NaN	10322	3688	14009
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14013	36.133	NaN	27680	30	0	3495	0.106			+	17757	IERDHNRIR	9	82	604.8339349642335	1207.653316995267	2	604.8358154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IERDHNRIR_	REV__ENSG00000144036|ENST00000272427|EXOC6B;REV__nc|ENSG00000144036|Q9Y2D4-2|EXOC6B	56.43379154798735	0.2433427591689151	6				NaN	NaN	0	NaN	10323	3688	14009
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14014	36.135	NaN	7676.2	30	0	934.75	0.106	+			17490	IDASVERVV	9	83	494.27722222205114	986.5398915109023	2	494.2790832519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IDASVERVV_	tr|U7T261|U7T261_FUSNUProteinTonBOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00482PE=3SV=1	42.396135135203025	0.392153681582562	6				NaN	NaN	0	NaN	10324	3688	14009
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14015	36.137	NaN	13503	30	0	2832.2	0.034				-1	 	0	75	479.2258683417066	956.4371837502132	2	479.226806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10325	3688	14009
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14016	36.137	NaN	15450	30	0	1713.5	0.141	+			3479	ASSFGNMIYK	10	97	559.2719628795993	NaN	0	559.2715454101562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASSFGNMIYK_	ENSG00000120137|ENST00000239231|PANK3	70.8162118820467	0.1459513513137803	6				NaN	NaN	0	NaN	10326	3688	14009
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14034	36.177	NaN	66436	30	0	15862	0.214	+			426	AATSGEHLVAG	11	95	506.7570006939204	1011.4994484546409	2	506.7588195800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AATSGEHLVAG_	ENSG00000048707|ENST00000620676|VPS13D;nc|ENSG00000048707|Q5THJ4-2|VPS13D	60.97194046774394	0.3147792151722205	6				NaN	NaN	0	NaN	10341	3691	14033
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14035	36.18	NaN	24590	30	0	2898.5	0.106			+	11997	FVTKGNASF	9	85	485.75220827834744	969.4898636234949	2	485.7532958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FVTKGNASF_	REV__tr|U7STF7|U7STF7_FUSNUDUF1576domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01332PE=4SV=1	124.59426212874841	0.018418509520798258	6				NaN	NaN	0	NaN	10342	3691	14033
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14036	36.182	NaN	16421	30	0	2606.2	0.106	+			44235	TRSKLSEIG	9	86	495.782879019202	989.5512051052041	2	495.78460693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TRSKLSEIG_	tr|U7SWW8|U7SWW8_FUSNUTransporterOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01201PE=4SV=1	72.87924865735499	0.12833875048249987	6				NaN	NaN	0	NaN	10343	3691	14033
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14037	36.184	NaN	26546	30	0	3109.9	0.106				-1	 	0	77	464.7803764531038	927.5461999730077	2	464.7818298339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10344	3691	14033
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14038	36.186	NaN	11200	30	0	894.46	0.106			+	-1	TMRVEYRM	8	77	551.2623769986167	1100.5102010640333	2	551.2647705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_TMRVEYRM(Oxidation (M))_	REV__ENSG00000156097|ENST00000527748|GPR61	55.50420428727701	0.5462892107279674	6				NaN	NaN	0	NaN	10345	3691	14033
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14039	36.188	NaN	6406.2	30	0	1330.6	0.035	+			17482	ICTRLRVF	8	57	336.5344378546052	NaN	0	336.5343933105469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ICTRLRVF_	ENST00000196371.9_1_5:41731773-41731827:-|nuORF	30.503639358989545	1.7418937515398478	6				NaN	NaN	0	NaN	10346	3691	14033
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14040	36.188	NaN	6937.2	30	0	758.66	0.142	+			20021	KEILRCEQI	9	82	566.3136631090924	1130.6127732849848	2	566.3157958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KEILRCEQI_	ENSG00000143669|ENST00000389793|LYST;ENST00000489585.5_1_1:235926109-235996891:-|nuORF;LYST|p.E1851Dfs*2|1|0.15|ENSG00000143669|chr1:235774994-235774994|T/-|frameshift_variant;LYST|p.F2078Lfs*38|1|0.35|ENSG00000143669|chr1:235762739-235762739|A/-|frameshift_variant;nc|ENSG00000143669|Q99698-2|LYST	80.45461616416974	0.09558281504443908	6				NaN	NaN	0	NaN	10347	3691	14033
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14058	36.226	NaN	52308	30	0	9484	0.184			+	38382	SRSVPKLED	9	83	515.7805070412201	1029.54646114924	2	515.7818603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SRSVPKLED_	REV__ENSG00000177239|ENST00000371589|MAN1B1;REV__MAN1B1|p.L339Sfs*2|3|0.33|ENSG00000177239|chr9:137101096-137101096|G/-|frameshift_variant	71.87747018426188	0.13267044672804276	6				NaN	NaN	0	NaN	10362	3694	14057
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14059	36.229	NaN	82988	30	0	5958.3	0.106				-1	 	0	102	546.3065574242515	1090.598561915303	2	546.3086547851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10363	3694	14057
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14060	36.232	NaN	48315	30	0	12922	0.106	+			51014	YIYDGELVSK	10	92	593.801857477856	1185.5891620225118	2	593.8031616210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YIYDGELVSK_	ENSG00000117620|ENST00000533028|SLC35A3;nc|ENSG00000283761|Q9Y2D2-2|SLC35A3	96.66504779109242	0.09291513985748291	6				NaN	NaN	0	NaN	10364	3694	14057
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14061	36.233	NaN	39525	30	0	6500.5	0.106			+	6849	CKFTLIIVTL	10	92	575.8491400907707	1149.6837272483413	2	575.8507080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_CKFTLIIVTL_	REV__ENST00000467542.5_1_13:20411687-20425669:-|nuORF;REV__nc|ENSG00000132950|Q9UJ78-1|ZMYM5	72.87924865735499	0.25379688738724415	6				NaN	NaN	0	NaN	10365	3694	14057
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14062	36.235	NaN	20266	30	0	3330.1	0.106				-1	 	0	100	488.8117034496338	975.6088539660676	2	488.8128662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10366	3694	14057
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14063	36.237	NaN	12810	30	0	1259.1	0.106	+			226	AALSYVLCK	9	83	512.777058096603	1023.539563260006	2	512.7783813476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_AALSYVLC(Carbamidomethyl (C))K_	ENSG00000161921|ENST00000293778|CXCL16	115.49404669440601	0.023927554121326553	6				NaN	NaN	0	NaN	10367	3694	14057
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14064	36.239	NaN	30209	30	0	4314.9	0.038			+	31736	QPAKRSIALGM	11	111	396.55702292886156	1186.6492393867848	3	396.5582580566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_QPAKRSIALGM(Oxidation (M))_	REV__ENST00000295133.9_1_2:73483541-73483895:-|nuORF	72.09557110113691	0.21826960075221502	6				NaN	NaN	0	NaN	10368	3694	14057
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14082	36.275	NaN	120110	30	0	25438	0.18				-1	 	0	101	486.26206785686475	970.5095827805295	2	486.2632751464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10383	3697	14081
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14083	36.278	NaN	31144	30	0	6523.8	0.106	+			45574	TYMGHTGAVW	10	89	561.7540867284772	1121.4936205237543	2	561.755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TYMGHTGAVW_	ENSG00000084623|ENST00000677711|EIF3I;ENST00000474371.1_1_1:32688150-32694122:+|nuORF;ENST00000489353.5_1_1:32688042-32691823:+|nuORF	122.1759843771914	0.024256477855972746	6				NaN	NaN	0	NaN	10384	3697	14081
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14084	36.28	NaN	22073	30	0	2603.9	0.106			+	47034	VLCRRLFD	8	84	511.2857659476509	1020.5569789621018	2	511.28741455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VLCRRLFD_	REV__ENSG00000010219|ENST00000543431|DYRK4;REV__ENST00000536137.1_1_12:4714126-4719451:+|nuORF;REV__nc|ENSG00000010219|Q9NR20-2|DYRK4;REV__nc|ENSG00000010219|Q9NR20-3|DYRK4;REV__nc|ENSG00000010219|Q9NR20-4|DYRK4;REV__nc|ENSG00000010219|Q9NR20|DYRK4	40.5726180659479	0.6527593143185008	6				NaN	NaN	0	NaN	10385	3697	14081
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14085	36.282	NaN	24906	30	0	1624.9	0.106	+			6549	AYINKVEEL	9	97	539.7913042242717	1077.5680555153433	2	539.7930908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AYINKVEEL_	DBI|p.K82N|1|0.47|ENSG00000155368|chr2:119372300-119372300|G/T|missense_variant;DBI|p.Y85Ifs*19|1|0.22|ENSG00000155368|chr2:119372300-119372301|-/A|frameshift_variant;ENSG00000155368|ENST00000355857|DBI;nc|ENSG00000155368|P07108-2|DBI;nc|ENSG00000155368|P07108-3|DBI;nc|ENSG00000155368|P07108-4|DBI;nc|ENSG00000155368|P07108-5|DBI	115.49404669440601	0.023927554121326553	6				NaN	NaN	0	NaN	10386	3697	14081
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14086	36.284	NaN	22953	30	0	3043.8	0.106			+	10664	EYRGQSEASKM	11	85	651.2931804588177	1300.5718079844353	2	651.295166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_EYRGQSEASKM(Oxidation (M))_	REV__ENSG00000129493|ENST00000543095|HEATR5A;REV__ENST00000549185.5_3_14:31803609-31872202:-|nuORF;REV__HEATR5A|p.A970Vfs*19|1|0.07|ENSG00000129493|chr14:31345236-31345237|-/AGCTA|frameshift_variant;REV__HEATR5A|p.S334Lfs*4|1|0.18|ENSG00000129493|chr14:31387309-31387309|A/-|frameshift_variant;REV__nc|ENSG00000129493|Q86XA9-2|HEATR5A;REV__nc|ENSG00000129493|Q86XA9|HEATR5A	85.16082228582465	0.11858485847190207	6				NaN	NaN	0	NaN	10387	3697	14081
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14087	36.286	NaN	14881	30	0	7958.2	0.106			+	38960	SSRELRAL	8	71	466.27030328616	930.52605363912	2	466.27154541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSRELRAL_	REV__ENSG00000159753|ENST00000334583|CARMIL2;REV__nc|ENSG00000159753|Q6F5E8-2|CARMIL2	37.15910966729921	0.6739408393984688	6				NaN	NaN	0	NaN	10388	3697	14081
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14088	36.287	NaN	16307	30	0	2310.6	0.036	+			47482	VQCPVFNIK	9	92	552.7951953522806	1103.5758377713612	2	552.797607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_VQC(Carbamidomethyl (C))PVFNIK_	ENST00000310015.10_1_2:174820725-174820848:-|nuORF	96.19043198914106	0.047412499214244314	6				NaN	NaN	0	NaN	10389	3697	14081
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14106	36.322	NaN	10751	30	0	1225.4	0.214				-1	 	0	74	499.7492675892616	997.4839822453232	2	499.7505798339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10404	3700	14105
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14107	36.326	NaN	14660	30	0	1825.5	0.106			+	18396	IRMSHVIC	8	80	479.75182949826825	957.4891060633365	2	479.7528991699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IRMSHVIC_	REV__ENSG00000166415|ENST00000360509|WDR72;REV__WDR72|p.M778Cfs*9|2|0.19|ENSG00000166415|chr15:53615874-53615874|T/-|frameshift_variant;REV__WDR72|p.R714Nfs*19|1|0.09|ENSG00000166415|chr15:53616065-53616066|-/CAGT|frameshift_variant;REV__WDR72|p.R714Tfs*5|1|0.09|ENSG00000166415|chr15:53616067-53616068|-/ATTCTATGGTGGTG|frameshift_variant	47.91560031466742	0.6071945918984287	6				NaN	NaN	0	NaN	10405	3700	14105
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14108	36.328	NaN	19370	30	0	1532.2	0.106				-1	 	0	89	517.8140171692081	1033.6134814052161	2	517.8155517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10406	3700	14105
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14109	36.33	NaN	10522	30	0	1742	0.106	+			30167	PSGARRNILQT	11	79	606.8436436706364	1211.6727344080728	2	606.8455810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PSGARRNILQT_	ENSG00000137877|ENST00000320955|SPTBN5;SPTBN5|p.A3297Gfs*48|1|0.56|ENSG00000137877|chr15:41853672-41853673|-/C|frameshift_variant;SPTBN5|p.G2751Afs*60|1|0.08|ENSG00000137877|chr15:41857685-41857685|C/-|frameshift_variant	46.45678178249821	0.46959456050452836	6				NaN	NaN	0	NaN	10407	3700	14105
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14110	36.332	NaN	10178	30	0	962.3	0.106			+	-1	KDNCVVRDEL	10	84	624.3058188610796	1246.5970847889591	2	624.3076782226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_KDNC(Carbamidomethyl (C))VVRDEL_	REV__ENSG00000157240|ENST00000287934|FZD1	58.22992032128504	0.38193887838457763	6				NaN	NaN	0	NaN	10408	3700	14105
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14111	36.333	NaN	35070	30	0	3992.9	0.036	+			38666	SSIQQGNIHN	10	87	549.2706545592536	1096.526756185307	2	549.273193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SSIQQGNIHN_	L1MEc_dup13396|chr12:12101391-12102664:+|1.620703183190708|0.1673385782039856|3.28|479.0|36|3|sense	82.24051045832904	0.17731618517892733	6				NaN	NaN	0	NaN	10409	3700	14105
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14112	36.334	NaN	40615	30	0	9543.2	0.14	+			14895	GTLSSWNLK	9	86	503.2721068852021	1004.5296608372042	2	503.2710876464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GTLSSWNLK_	ENST00000380319.2_1_X:15782817-15782931:+|nuORF;ENST00000380334.6_1_X:15706900-15721312:+|nuORF;ENST00000380336.5_1_X:15706900-15715389:+|nuORF;ENST00000435806.2_1_X:15706900-15713817:+|nuORF;nc|ENSG00000290746|Q8WTZ4|CA5BP1	167.22876102047192	0.0032399547248545047	6				NaN	NaN	0	NaN	10410	3700	14105
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14130	36.372	NaN	100030	30	0	18878	0.214				-1	 	0	90	457.2412061362499	912.4678593392998	2	457.242431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10425	3703	14129
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14131	36.376	NaN	64851	30	0	19072	0.106				-1	 	0	90	355.18946833298594	1062.546575599158	3	355.1905517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10426	3703	14129
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14132	36.378	NaN	36691	30	0	6781.5	0.106	+			43369	TGEAMLVIK	9	93	481.2723092693346	960.5300656054692	2	481.2733154296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TGEAMLVIK_	tr|U7T480|U7T480_FUSNUhistidinekinaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00375PE=4SV=1	95.81516180277367	0.04847050768394289	6				NaN	NaN	0	NaN	10427	3703	14129
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14133	36.38	NaN	33488	30	0	4163.9	0.106	+			2358	AMYTYFQAK	9	97	561.7663465186786	1121.518140104157	2	561.76806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AMYTYFQAK_	ENSG00000116260|ENST00000367602|QSOX1	124.08010499294276	0.018729767491916592	6				NaN	NaN	0	NaN	10428	3703	14129
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14134	36.382	NaN	38617	30	0	5996.2	0.106			+	33919	RRTRTGVSP	9	96	515.2981516142371	1028.581750295274	2	515.2998657226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RRTRTGVSP_	REV__ENST00000570986.1_1_17:4457199-4458649:-|nuORF	52.936696900407355	0.27249468807391813	6				NaN	NaN	0	NaN	10429	3703	14129
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14135	36.383	NaN	7829.8	30	0	523.06	0.032	+			46738	VGRADGKP	8	68	400.22536518814536	798.4361774430907	2	400.226806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VGRADGKP_	ENST00000319481.7_1_18:21977621-21977729:-|nuORF	45.9519527083369	0.6193794311207887	6				NaN	NaN	0	NaN	10430	3703	14129
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14136	36.384	NaN	6707.9	30	0	526.91	0.139	+			11047	FEMTVEKV	8	71	491.7486053833996	981.4826578335992	2	491.7493591308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FEMTVEKV_	ENSG00000278311|ENST00000613102|GGNBP2;GGNBP2|p.D388Vfs*15|1|0.2|ENSG00000278311|chr17:36581474-36581475|-/GT|frameshift_variant;nc|ENSG00000278311|Q9H3C7-3|GGNBP2	85.16082228582465	0.29211966821764696	6				NaN	NaN	0	NaN	10431	3703	14129
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14154	36.421	NaN	39382	30	0	8512.9	0.214	+			6937	CPEVFPLLQ	9	81	523.2727709099357	1044.5309888866714	2	523.2744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CPEVFPLLQ_	ENSG00000172578|ENST00000341319|KLHL6;ENST00000489245.5_1_3:183211997-183273441:-|nuORF	94.00642277110589	0.05356993013874309	6				NaN	NaN	0	NaN	10446	3706	14153
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14155	36.425	NaN	11056	30	0	2417.7	0.106			+	27222	MEKIDAGAAF	10	76	526.7597858836912	1051.5050188341822	2	526.7625122070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MEKIDAGAAF_	REV__ENSG00000127884|ENST00000368547|ECHS1	74.25504064058377	0.24255678544297835	6				NaN	NaN	0	NaN	10447	3706	14153
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14156	36.427	NaN	9328.7	30	0	845.55	0.106	+			46069	VCLSLRLCL	9	77	510.2905168973162	1018.5664808614324	2	510.2921447753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VCLSLRLCL_	ENST00000473978.5_1_3:196014411-196014483:-|nuORF	51.33545320467046	0.2872990594074956	6				NaN	NaN	0	NaN	10448	3706	14153
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14157	36.429	NaN	8044.1	30	0	1001.4	0.106			+	28743	NNYNKDLI	8	80	497.2525971891816	992.4906414451632	2	497.2537536621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NNYNKDLI_	REV__tr|U7SSB8|U7SSB8_FUSNUSignalpeptidepeptidaseSppA,67KtypeOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01676PE=3SV=1	57.81127852772723	0.5234495074909924	6				NaN	NaN	0	NaN	10449	3706	14153
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14158	36.43	NaN	4927.3	30	0	252.78	0.106			+	9440	EKLAQLQEQL	10	77	600.3332686627504	1198.6519843923006	2	600.3357543945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EKLAQLQEQL_	REV__ENSG00000137497|ENST00000393695|NUMA1;REV__nc|ENSG00000137497|Q14980-2|NUMA1;REV__nc|ENSG00000137497|Q14980-3|NUMA1;REV__nc|ENSG00000137497|Q14980-4|NUMA1;REV__NUMA1|p.K1766Rfs*2|1|0.39|ENSG00000137497|chr11:72007357-72007357|G/-|frameshift_variant;REV__NUMA1|p.L1786Pfs*18|1|0.23|ENSG00000137497|chr11:72007295-72007296|-/G|frameshift_variant	123.11161354013207	0.02293503976405718	6				NaN	NaN	0	NaN	10450	3706	14153
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14159	36.432	NaN	14140	30	0	1521.3	0.036			+	37854	SNNSGLLHLN	10	87	534.7756113188955	1067.5366697045908	2	534.7781982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SNNSGLLHLN_	REV__ENST00000557192.1_1_14:58896136-58899908:+|nuORF	33.921630207806714	0.6028135429846169	6				NaN	NaN	0	NaN	10451	3706	14153
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14160	36.433	NaN	5926.7	30	0	3546.2	0.138				-1	 	0	68	329.2006004452543	656.3866479573086	2	329.2015380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10452	3706	14153
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14178	36.472	NaN	30616	30	0	4749.4	0.214	+			11372	FLKILAMHG	9	90	515.2981516142371	1028.581750295274	2	515.8007202148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FLKILAMHG_	ENSG00000163464|ENST00000295683|CXCR1	42.47446043378293	0.39123495718708534	6				NaN	NaN	0	NaN	10467	3709	14177
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14179	36.476	NaN	11120	30	0	1323.4	0.106				-1	 	0	84	507.79351137733966	1013.5724698214793	2	507.7948913574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10468	3709	14177
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14180	36.478	NaN	21812	30	0	3086.1	0.106	+			17629	IEIYVQKV	8	85	496.2926160028896	990.5706790725792	2	496.2943115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IEIYVQKV_	CLTC|p.A1374*|1|0.05|ENSG00000141367|chr17:59683464-59683465|-/TA|frameshift_variant;CLTCL1|p.H915Ifs*56|1|0.35|ENSG00000070371|chr22:19221430-19221430|G/-|frameshift_variant;ENSG00000070371|ENST00000427926|CLTCL1;ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000070371|P53675-2|CLTCL1;nc|ENSG00000141367|Q00610-2|CLTC	125.81401957644128	0.2262431007506538	6				NaN	NaN	0	NaN	10469	3709	14177
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14181	36.48	NaN	11195	30	0	1773.4	0.106				-1	 	0	86	520.3093032948244	1038.6040536564487	2	520.3113403320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10470	3709	14177
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14182	36.481	NaN	4388.8	30	0	2163.8	0.106				-1	 	0	53	329.2006004452543	656.3866479573086	2	329.2015380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10471	3709	14177
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14183	36.483	NaN	4829.8	30	0	1474.4	0.034			+	-1	LDKKGSMR	8	70	475.75839631864613	949.5022397040923	2	475.75958251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_LDKKGSM(Oxidation (M))R_	REV__ENSG00000149257|ENST00000358171|SERPINH1	31.529811441608018	0.715883593221515	6				NaN	NaN	0	NaN	10472	3709	14177
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14184	36.484	NaN	6578.6	30	0	948.7	0.143				-1	EMTEKPEFQS	10	79	621.2723270413492	1240.5301011494983	2	621.7762451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_EM(Oxidation (M))TEKPEFQS_	ENSG00000164304|ENST00000502583|CAGE1;nc|ENSG00000164304|Q8TC20-3|CAGE1;nc|ENSG00000164304|Q8TC20-4|CAGE1;nc|ENSG00000164304|Q8TC20|CAGE1	28.081489160057373	0.6505064946289502	6				NaN	NaN	0	NaN	10473	3709	14177
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14202	36.523	NaN	207200	30	0	50364	0.131			+	8970	EFLGGARGQE	10	79	532.2624542577415	1062.510355582283	2	532.2640991210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EFLGGARGQE_	REV__ENST00000510624.5_1_4:109087727-109087808:-|nuORF	98.58198989935565	0.0819402597096128	6				NaN	NaN	0	NaN	10488	3712	14201
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14203	36.525	NaN	63027	30	0	4897.1	0.106				-1	LSMADIRAL	9	98	503.2721068852021	1004.5296608372042	2	503.2761535644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LSM(Oxidation (M))ADIRAL_	ENSG00000110697|ENST00000356404|PITPNM1;ENST00000530381.1_1_11:67267376-67267878:-|nuORF;nc|ENSG00000110697|O00562-2|PITPNM1;PITPNM1|p.L610Wfs*101|1|0.21|ENSG00000110697|chr11:67497634-67497634|G/-|frameshift_variant	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	10489	3712	14201
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14204	36.528	NaN	37596	30	0	3451.2	0.106	+			51383	YTLRLCKM	8	88	550.7831334552895	1099.551713977379	2	550.7852783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_YTLRLC(Carbamidomethyl (C))KM(Oxidation (M))_	ENSG00000088926|ENST00000403665|F11;nc|ENSG00000088926|P03951-2|F11	85.35947970620816	0.2915182781752196	6				NaN	NaN	0	NaN	10490	3712	14201
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14205	36.529	NaN	12545	30	0	1113.1	0.106			+	43758	TLGESQKQM	9	81	519.2505816824429	1036.4866104316857	2	519.25244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_TLGESQKQM(Oxidation (M))_	REV__ENST00000563143.2_1_16:32882346-32883351:+|nuORF	77.31757898189308	0.1091473830098891	6				NaN	NaN	0	NaN	10491	3712	14201
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14206	36.531	NaN	20496	30	0	2177.2	0.106			+	43046	TELCMYLL	8	95	493.2404096580083	984.4662663828166	2	493.24224853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TELCMYLL_	REV__ENSG00000129219|ENST00000263088|PLD2;REV__ENST00000575246.6_1_17:4711576-4721404:+|nuORF;REV__nc|ENSG00000129219|O14939-3|PLD2;REV__nc|ENSG00000129219|O14939-4|PLD2;REV__PLD2|p.R330Gfs*10|1|0.33|ENSG00000129219|chr17:4810926-4810926|C/-|frameshift_variant	54.76467175910256	0.5536104764165384	6				NaN	NaN	0	NaN	10492	3712	14201
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14207	36.533	NaN	17874	30	0	2214.1	0.106			+	23359	KYTRSLSSVL	10	84	577.3327457287837	1152.6509385243673	2	577.3348388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KYTRSLSSVL_	REV__ENSG00000196549|ENST00000360490|MME	109.43880257439609	0.049666173740610824	6				NaN	NaN	0	NaN	10493	3712	14201
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14208	36.535	NaN	15540	30	0	1169.8	0.037			+	44993	TVDPRVTFGE	10	93	560.785753525548	1119.5569541178959	2	560.78759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TVDPRVTFGE_	REV__ENSG00000130475|ENST00000596536|FCHO1;REV__nc|ENSG00000130475|O14526-2|FCHO1;REV__nc|ENSG00000130475|O14526-3|FCHO1	60.1669710687717	0.3643216362415131	6				NaN	NaN	0	NaN	10494	3712	14201
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14226	36.572	NaN	20162	30	0	4291.3	0.214	+			21079	KKMKMVTGA	9	72	505.28034666638746	1008.5461403995749	2	505.281494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_KKM(Oxidation (M))KMVTGA_	ENSG00000067533|ENST00000366932|RRP15;ENST00000491428.1_1_1:218458703-218475928:+|nuORF	73.97473282117947	0.12360187025703594	6				NaN	NaN	0	NaN	10509	3715	14225
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14227	36.576	NaN	21112	30	0	3896.5	0.106	+			11201	FHLIHLMF	8	80	529.2857386078247	1056.5569242824492	2	529.28759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FHLIHLMF_	ENSG00000111783|ENST00000392842|RFX4;ENST00000536688.5_1_12:106995054-107126892:+|nuORF;nc|ENSG00000111783|Q33E94-2|RFX4;nc|ENSG00000111783|Q33E94-3|RFX4;nc|ENSG00000111783|Q33E94-4|RFX4	43.626045697637714	0.6338121648150432	6				NaN	NaN	0	NaN	10510	3715	14225
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14228	36.578	NaN	20429	30	0	1871.5	0.106			+	16775	HNTQLETTS	9	83	515.7439594405407	1029.4733659478813	2	515.74560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HNTQLETTS_	REV__ENST00000446198.5_1_7:131188931-131189063:-|nuORF	44.116797842482775	0.37197099687881774	6				NaN	NaN	0	NaN	10511	3715	14225
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14229	36.58	NaN	14927	30	0	2424.1	0.106			+	2439	APGRQPQKMM	10	80	593.297011635005	1184.57947033681	2	593.298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))APGRQPQKMM_	REV__CON__Q2KJ83	42.396135135203025	0.5270658956260207	6				NaN	NaN	0	NaN	10512	3715	14225
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14230	36.582	NaN	7245.6	30	0	1435.5	0.106			+	43480	TGPALHTIVV	10	52	336.5344378546052	NaN	0	336.5341491699219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TGPALHTIVV_	REV__ENSG00000153048|ENST00000311052|CARHSP1	16.473147378115264	0.4201028297492154	6				NaN	NaN	0	NaN	10513	3715	14225
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14231	36.583	NaN	5947.9	30	0	723.93	0.035			+	27359	MISAHPRPL	9	68	511.2857659476509	1020.5569789621018	2	511.7870178222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MISAHPRPL_	REV__DHX9|p.L1065Cfs*20|1|0.41|ENSG00000135829|chr1:182883563-182883563|C/-|frameshift_variant;REV__DHX9|p.L657Ffs*44|1|0.34|ENSG00000135829|chr1:182876197-182876198|-/T|frameshift_variant;REV__ENSG00000135829|ENST00000367549|DHX9	37.15910966729921	0.4535818937225704	6				NaN	NaN	0	NaN	10514	3715	14225
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14232	36.584	NaN	7818.9	30	0	1016.5	0.141	+			23937	LDQFQEKY	8	86	535.7645660498919	NaN	0	535.7664184570312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LDQFQEKY_	ENSG00000033178|ENST00000322244|UBA6;ENST00000429659.7_1_4:68528855-68528909:-|nuORF;nc|ENSG00000033178|A0AVT1-3|UBA6	56.72105179125745	1.7418937515398478	6				NaN	NaN	0	NaN	10515	3715	14225
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14250	36.623	NaN	33647	30	0	5321.4	0.214				-1	 	0	86	488.8117034496338	975.6088539660676	2	488.81292724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10530	3718	14249
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14251	36.627	NaN	73087	30	0	13341	0.106	+			47268	VMSQALKATF	10	108	548.2947217863788	1094.5748906395575	2	548.2972412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VMSQALKATF_	ENSG00000157557|ENST00000360938|ETS2	174.8648734531126	0.002138720898421076	6				NaN	NaN	0	NaN	10531	3718	14249
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14252	36.629	NaN	23037	30	0	2080.4	0.106				-1	 	0	81	486.2963701711447	970.5781874090894	2	486.2976379394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10532	3718	14249
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14253	36.631	NaN	11480	30	0	1782	0.106				-1	 	0	71	472.2751191500764	942.5356853669529	2	472.27630615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10533	3718	14249
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14254	36.633	NaN	46410	30	0	7420.1	0.106				-1	 	0	88	507.26523778782956	1012.5159226424591	2	507.2666931152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10534	3718	14249
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14255	36.635	NaN	24328	30	0	14256	0.039			+	7695	DLLKAVSKHPF	11	71	418.9114484758621	1253.7125160277863	3	418.91265869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DLLKAVSKHPF_	REV__ENST00000537589.1_2_2:65301228-65301667:+|nuORF	34.08650109265054	0.6322515996262609	6				NaN	NaN	0	NaN	10535	3718	14249
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14256	36.635	NaN	11680	30	0	2048.7	0.139				-1	 	0	77	468.79600958881605	935.5774662444321	2	468.7972412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10536	3718	14249
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14274	36.675	NaN	22067	30	0	3182.2	0.214	+			33215	RFIGATANF	9	83	498.7654227100535	995.516292486907	2	498.7664489746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RFIGATANF_	ENSG00000172922|ENST00000308418|RNASEH2C	112.41091882917199	0.026537921851008135	6				NaN	NaN	0	NaN	10551	3721	14273
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14275	36.678	NaN	20591	30	0	2409.2	0.106	+			24626	LGSKHSSATY	10	87	525.7649154816654	1049.5152780301307	2	525.7664794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LGSKHSSATY_	ENSG00000152104|ENST00000366956|PTPN14	44.377184641726394	0.5088115166961078	6				NaN	NaN	0	NaN	10552	3721	14273
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14276	36.68	NaN	10207	30	0	656.56	0.106			+	45452	TWPHCKEFA	9	87	559.7588787578902	1117.5032045825803	2	559.7615356445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TWPHCKEFA_	REV__ENSG00000101017|ENST00000372285|CD40;REV__ENST00000489304.5_1_20:44746991-44755859:+|nuORF;REV__nc|ENSG00000101017|P25942-2|CD40	75.04331003522576	0.118981335847003	6				NaN	NaN	0	NaN	10553	3721	14273
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14277	36.682	NaN	6859.3	30	0	631.39	0.106			+	28277	NEAKLEDLFAK	11	80	639.3404386016357	1276.6663242700713	2	639.34228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NEAKLEDLFAK_	REV__ENSG00000086205|ENST00000256999|FOLH1;REV__ENST00000529567.5_1_11:89372457-89431764:+|nuORF;REV__ENST00000529646.5_1_11:49214323-49229873:-|nuORF;REV__FOLH1|p.K499Ifs*16|1|0.06|ENSG00000086205|chr11:49157988-49157989|-/GAAAA|frameshift_variant;REV__FOLH1|p.N216Mfs*24|1|0.25|ENSG00000086205|chr11:49185848-49185848|T/-|frameshift_variant;REV__FOLH1|p.S338Yfs*13|1|0.37|ENSG00000086205|chr11:49175866-49175867|AA/-|frameshift_variant;REV__FOLH1|p.S501Kfs*20|1|0.27|ENSG00000086205|chr11:49157982-49157983|-/T|frameshift_variant;REV__FOLH1|p.S501Vfs*12|1|0.15|ENSG00000086205|chr11:49157983-49157983|T/-|frameshift_variant;REV__nc|ENSG00000086205|Q04609-3|FOLH1;REV__nc|ENSG00000086205|Q04609-4|FOLH1;REV__nc|ENSG00000086205|Q04609-6|FOLH1;REV__nc|ENSG00000086205|Q04609-7|FOLH1;REV__nc|ENSG00000086205|Q04609-8|FOLH1;REV__nc|ENSG00000086205|Q04609-9|FOLH1	63.42647028704847	0.292869158926425	6				NaN	NaN	0	NaN	10554	3721	14273
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14278	36.684	NaN	23965	30	0	7095.1	0.106			+	20772	KHRQPKITI	9	93	374.2361042216306	1119.686483265092	3	374.2372131347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KHRQPKITI_	REV__tr|U7SV20|U7SV20_FUSNU3-oxoacyl-[acyl-carrierprotein]reductaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01097PE=3SV=1	36.446750945000026	0.4619375763483977	6				NaN	NaN	0	NaN	10555	3721	14273
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14279	36.686	NaN	12639	30	0	1090.7	0.035				-1	 	0	83	513.2727147302857	1024.5308765273712	2	513.2743530273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10556	3721	14273
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14280	36.686	NaN	6417.3	30	0	551.12	0.14	+			26801	LVSGVLYYK	9	70	521.3011400382078	1040.5877271432155	2	521.3032836914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LVSGVLYYK_	ENSG00000131269|ENST00000373394|ABCB7;nc|ENSG00000131269|O75027-2|ABCB7;nc|ENSG00000131269|O75027-3|ABCB7	49.44154591367651	0.3095138337212152	6				NaN	NaN	0	NaN	10557	3721	14273
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14296	36.721	NaN	136420	30	0	13454	0.18			+	50311	WSVCRRALNK	10	95	616.8381813090105	1231.6618096848208	2	616.84033203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WSVCRRALNK_	REV__ENST00000373943.8_1_1:28146229-28148790:+|nuORF	79.48907831485694	0.19979514868675113	6				NaN	NaN	0	NaN	10570	3724	14295
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14297	36.724	NaN	68631	30	0	9627.2	0.106				-1	 	0	95	532.7887691274404	1063.5629853216808	2	532.791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10571	3724	14295
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14298	36.726	NaN	78519	30	0	9021.7	0.106	+			30857	QEHLQLQNL	9	99	561.7963233505918	1121.5780937679835	2	561.7991943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QEHLQLQNL_	CLTC-CEP95|1|fusion;CLTC|p.A1374*|1|0.05|ENSG00000141367|chr17:59683464-59683465|-/TA|frameshift_variant;CLTC|p.D632Yfs*7|1|0.15|ENSG00000141367|chr17:59666589-59666590|-/TTACA|frameshift_variant;ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000141367|Q00610-2|CLTC	122.1759843771914	0.019882474861609503	6				NaN	NaN	0	NaN	10572	3724	14295
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14299	36.728	NaN	26603	30	0	3444	0.106	+			14299	GSWASLVQK	9	83	488.2668109631672	NaN	0	488.2665100097656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GSWASLVQK_	BRD4|p.P1210L|1|0.19|ENSG00000141867|chr19:15239212-15239212|G/A|missense_variant;ENSG00000141867|ENST00000679869|BRD4	104.0567914643314	0.015064339666778382	6				NaN	NaN	0	NaN	10573	3724	14295
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14300	36.73	NaN	70565	30	0	9461	0.106	+			37479	SLKLMGRVM	9	98	525.793448992982	1049.572345052764	2	525.7954711914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_SLKLMGRVM(Oxidation (M))_	ENST00000381298.6_1_5:55233024-55233087:-|nuORF	69.6276240434122	0.14239879520340665	6				NaN	NaN	0	NaN	10574	3724	14295
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14301	36.732	NaN	10354	30	0	2404.6	0.106	+			18144	ILLPVIMER	9	77	571.3363932278514	1140.6582335225028	2	571.3385620117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))ILLPVIM(Oxidation (M))ER_	ENSG00000156398|ENST00000369893|SFXN2;SFXN2|p.E251D|1|0.19|ENSG00000156398|chr10:102732890-102732890|G/T|missense_variant;SFXN2|p.P265Sfs*27|1|0.05|ENSG00000156398|chr10:102733574-102733575|-/T|frameshift_variant	71.29570347882199	0.13518600952103718	6				NaN	NaN	0	NaN	10575	3724	14295
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14302	36.734	NaN	25502	30	0	3372.6	0.036			+	24015	LEDTNQLQL	9	83	537.277966417422	1072.541379901644	2	537.2794189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LEDTNQLQL_	REV__ENSG00000134539|ENST00000336164|KLRD1;REV__ENST00000538997.1_1_12:10460676-10464247:+|nuORF;REV__nc|ENSG00000134539|Q13241-2|KLRD1;REV__nc|ENSG00000134539|Q13241-3|KLRD1	51.33545320467046	0.2872990594074956	6				NaN	NaN	0	NaN	10576	3724	14295
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14320	36.771	NaN	22755	30	0	2109.1	0.214			+	-1	SYVADQMHI	9	86	540.2441145340537	1078.4736761349072	2	540.2454223632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_SYVADQM(Oxidation (M))HI_	REV__ENSG00000049656|ENST00000320895|CLPTM1L;REV__nc|ENSG00000049656|Q96KA5-2|CLPTM1L	66.42927471994793	0.16001998865088202	6				NaN	NaN	0	NaN	10591	3727	14319
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14321	36.775	NaN	46294	30	0	29537	0.106				-1	 	0	81	489.2728156038303	976.5310782744606	2	489.2732849121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10592	3727	14319
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14322	36.777	NaN	13407	30	0	1770.3	0.106	+			18534	ISLLNITEP	9	79	500.291851651261	998.5691503693221	2	500.2950439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ISLLNITEP_	ENSG00000162408|ENST00000377705|NOL9;NOL9|p.S460Afs*5|1|0.22|ENSG00000162408|chr1:6532620-6532620|T/-|frameshift_variant	58.22992032128504	0.22837015374068087	6				NaN	NaN	0	NaN	10593	3727	14319
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14323	36.779	NaN	3702.9	30	0	533.61	0.106				-1	 	0	67	452.7284720100256	903.4423910868512	2	452.7297058105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10594	3727	14319
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14324	36.781	NaN	6987.1	30	0	423.43	0.106				-1	CNRFTMEVP	9	74	577.2597547779621	1152.5049566227242	2	577.261962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_C(Carbamidomethyl (C))NRFTMEVP_	ENSG00000089154|ENST00000300648|GCN1	51.33545320467046	0.2872990594074956	6				NaN	NaN	0	NaN	10595	3727	14319
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14325	36.782	NaN	9042.1	30	0	1434.4	0.038				-1	EPLMLQCGHS	10	58	391.1792816373048	1170.5160155121146	3	391.1805725097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_EPLMLQC(Carbamidomethyl (C))GHS_	ENSG00000146755|ENST00000333149|TRIM50;nc|ENSG00000146755|Q86XT4-2|TRIM50;TRIM50|p.Q231Tfs*5|1|0.2|ENSG00000146755|chr7:73318858-73318859|-/C|frameshift_variant	26.063383197487333	0.6669871633831898	6				NaN	NaN	0	NaN	10596	3727	14319
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14326	36.783	NaN	4539.9	30	0	449.49	0.138	+			17425	IASWKGLV	8	67	437.2634543731723	872.5123558131446	2	437.26470947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IASWKGLV_	ENSG00000224051|ENST00000343938|CPTP	63.30626980617807	0.4690498839812213	6				NaN	NaN	0	NaN	10597	3727	14319
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14344	36.822	NaN	87852	30	0	31640	0.214	+			34779	RYIPTAAAF	9	89	505.2759302423007	1008.5373075514015	2	505.2767639160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RYIPTAAAF_	ENSG00000058262|ENST00000243253|SEC61A1;ENSG00000065665|ENST00000298428|SEC61A2;ENST00000498837.1_1_3:127786720-127788502:+|nuORF;nc|ENSG00000058262|P61619-3|SEC61A1;nc|ENSG00000065665|Q9H9S3-3|SEC61A2	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	10612	3730	14343
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14345	36.826	NaN	38044	30	0	4625	0.106	+			29055	NTGRHVSLR	9	89	520.2911309002783	1038.5677088673565	2	520.2928466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NTGRHVSLR_	ENSG00000154975|ENST00000451037|CA10;nc|ENSG00000154975|Q9NS85-2|CA10	41.42661286455405	0.403525789677298	6				NaN	NaN	0	NaN	10613	3730	14343
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14346	36.828	NaN	22149	30	0	1931.9	0.106			+	27944	MVGKVWGFR	9	92	540.2932627045218	1078.5719724758435	2	540.2963256835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MVGKVWGFR_	REV__ENSG00000070915|ENST00000563236|SLC12A3;REV__nc|ENSG00000070915|P55017-2|SLC12A3;REV__nc|ENSG00000070915|P55017-3|SLC12A3;REV__SLC12A3|p.V295Afs*7|1|0.05|ENSG00000070915|chr16:56872382-56872382|T/-|frameshift_variant	79.45101966838831	0.09992237243120712	6				NaN	NaN	0	NaN	10614	3730	14343
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14347	36.83	NaN	13424	30	0	1974.4	0.106	+			29761	PHVPPDGSEL	10	77	524.2593763741626	1046.504199815125	2	524.26123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PHVPPDGSEL_	ENST00000437840.6_1_6:33264453-33266669:-|nuORF;ENST00000478610.5_1_6:33264453-33265760:-|nuORF;ENST00000494550.5_1_6:33264453-33265064:-|nuORF	49.44154591367651	0.46214596422418036	6				NaN	NaN	0	NaN	10615	3730	14343
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14348	36.832	NaN	14856	30	0	1815.6	0.106	+			12951	GESSLRNFTM	10	80	571.2683111553075	1140.522069377415	2	571.2692260742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GESSLRNFTM_	ENSG00000153147|ENST00000283131|SMARCA5;ENST00000515531.1_1_4:144464789-144465131:+|nuORF	70.39856735676683	0.27406383984062843	6				NaN	NaN	0	NaN	10616	3730	14343
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14349	36.833	NaN	19029	30	0	2283.6	0.034				-1	 	0	75	485.30676870898907	968.5989844847782	2	485.3079528808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10617	3730	14343
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14350	36.834	NaN	16663	30	0	2896.9	0.139				-1	 	0	78	476.236425554451	950.458298175702	2	476.23724365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10618	3730	14343
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14368	36.873	NaN	9822.9	30	0	2014.1	0.214				-1	 	0	63	410.23846194330713	818.4623709534143	2	410.2396240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10633	3733	14367
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14369	36.877	NaN	22655	30	0	2857.9	0.106			+	17179	HTQKYAEVY	9	85	569.7798608922571	1137.5451688513142	2	569.7817993164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HTQKYAEVY_	REV__ENSG00000196235|ENST00000432763|SUPT5H;REV__nc|ENSG00000196235|O00267-2|SUPT5H;REV__SUPT5H|p.P800Hfs*154|1|0.21|ENSG00000196235|chr19:39473425-39473425|C/-|frameshift_variant	99.37495909608758	0.03983967222258828	6				NaN	NaN	0	NaN	10634	3733	14367
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14370	36.879	NaN	12141	30	0	2015.1	0.106	+			29026	NSSSAKDNSI	10	73	511.74149922234733	1021.4684455114947	2	511.74298095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NSSSAKDNSI_	ENSG00000038427|ENST00000265077|VCAN;ENST00000513016.5_1_5:82832752-82876250:+|nuORF;nc|ENSG00000038427|P13611-2|VCAN;nc|ENSG00000038427|P13611-3|VCAN;nc|ENSG00000038427|P13611-4|VCAN	66.96192283764107	0.30252237217063654	6				NaN	NaN	0	NaN	10635	3733	14367
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14371	36.881	NaN	11310	30	0	1206.4	0.106	+			47474	VQALKYENF	9	75	556.2934264717189	NaN	0	556.29296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VQALKYENF_	ENSG00000078142|ENST00000262039|PIK3C3;PIK3C3|p.F623Lfs*43|2|0.38|ENSG00000078142|chr18:42037716-42037716|T/-|frameshift_variant	101.25262130126117	0.018912469721856617	6				NaN	NaN	0	NaN	10636	3733	14367
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14372	36.883	NaN	15806	30	0	2426.3	0.106			+	31574	QLQSAPQKFE	10	83	588.3068577221097	1174.5991625110194	2	588.3087158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QLQSAPQKFE_	REV__ENST00000435590.1_1_21:46097057-46097849:-|nuORF	55.08391021199286	0.41055145962533396	6				NaN	NaN	0	NaN	10637	3733	14367
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14373	36.884	NaN	8916.2	30	0	1867.4	0.033				-1	 	0	68	422.73614315418024	843.4577333751605	2	422.7372131347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10638	3733	14367
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14374	36.885	NaN	6288.9	30	0	547.64	0.141	+			19593	KDEKNKTKK	9	73	559.8305492098694	1117.6465454865388	2	559.8326416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KDEKNKTKK_	MYOF|p.K33N|1|0.26|ENSG00000138119|chr10:93456927-93456927|C/A|missense_variant	51.52775601994872	0.28504342437107444	6				NaN	NaN	0	NaN	10639	3733	14367
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14392	36.924	NaN	21101	30	0	1453.9	0.214			+	20773	KHRTAAEAR	9	93	520.2911309002783	1038.5677088673565	2	520.292236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KHRTAAEAR_	REV__ENSG00000072195|ENST00000312358|SPEG	36.446750945000026	0.4619375763483977	6				NaN	NaN	0	NaN	10654	3736	14391
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14393	36.928	NaN	14055	30	0	3129.8	0.106	+			46501	VETVYTHVL	9	81	530.7861526886087	1059.5577524440173	2	530.7874755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VETVYTHVL_	ENSG00000163902|ENST00000296255|RPN1	147.69337715509954	0.007406765731929437	6				NaN	NaN	0	NaN	10655	3736	14391
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14394	36.93	NaN	17719	30	0	1703.4	0.106			+	20774	KHRTAAEAR	9	96	520.2911309002783	1038.5677088673565	2	520.7942504882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KHRTAAEAR_	REV__ENSG00000072195|ENST00000312358|SPEG	39.252832667884924	0.4290233611298554	6				NaN	NaN	0	NaN	10656	3736	14391
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14395	36.932	NaN	12738	30	0	919.49	0.106			+	47719	VSFNSKRKR	9	90	561.3305733549918	1120.6465937767834	2	561.3324584960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSFNSKRKR_	REV__ENSG00000170903|ENST00000301919|MSANTD4;REV__MSANTD4|p.S33Ffs*9|1|0.09|ENSG00000170903|chr11:106010820-106010821|-/A|frameshift_variant	40.05817265558897	0.419577045485086	6				NaN	NaN	0	NaN	10657	3736	14391
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14396	36.934	NaN	5904	30	0	1058.4	0.106	+			3019	ASFDKAKLK	9	56	336.5344378546052	NaN	0	336.5341491699219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASFDKAKLK_	ENSG00000034510|ENST00000233143|TMSB10	29.14955571784316	0.3303970763161698	6				NaN	NaN	0	NaN	10658	3736	14391
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14397	36.935	NaN	8677	30	0	1688.8	0.036			+	12000	FVTNTRAMV	9	75	527.7699763558151	1053.52539977843	2	527.7698364257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_FVTNTRAM(Oxidation (M))V_	REV__ENST00000475815.5_1_2:36779888-36779918:-|nuORF	65.80317337860623	0.1652391959156183	6				NaN	NaN	0	NaN	10659	3736	14391
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14398	36.936	NaN	9336	30	0	722.86	0.141	+			38332	SRGWTQMQL	9	77	553.7756179497177	1105.5366829662353	2	553.7778930664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SRGWTQMQL_	ENST00000466861.1_1_21:46233737-46238015:-|nuORF;nc|ENSG00000184900|P55854-2|SUMO3	77.31757898189308	0.1091473830098891	6				NaN	NaN	0	NaN	10660	3736	14391
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14414	36.971	NaN	103650	30	0	26208	0.184				-1	 	0	91	499.2880360155269	996.5615190978539	2	499.2895202636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10673	3739	14413
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14415	36.974	NaN	16341	30	0	1456.5	0.106	+			8755	EEFTGQLKV	9	82	525.7778066916285	NaN	0	525.77734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EEFTGQLKV_	ENSG00000054654|ENST00000555002|SYNE2;nc|ENSG00000054654|Q8WXH0|SYNE2;SYNE2|p.A5240Qfs*5|1|0.07|ENSG00000054654|chr14:64152639-64152639|G/-|frameshift_variant;SYNE2|p.D3074Ffs*8|1|0.07|ENSG00000054654|chr14:64053132-64053133|-/TTTCTTTTTCAAATACTTG|frameshift_variant;SYNE2|p.F2563Ifs*28|1|0.34|ENSG00000054654|chr14:64051593-64051594|-/A|frameshift_variant;SYNE2|p.F2840Lfs*3|1|0.38|ENSG00000054654|chr14:64052427-64052427|T/-|frameshift_variant;SYNE2|p.F4992Lfs*13|1|0.39|ENSG00000054654|chr14:64140067-64140067|T/-|frameshift_variant;SYNE2|p.K1189Sfs*4|1|0.35|ENSG00000054654|chr14:64000642-64000642|A/-|frameshift_variant;SYNE2|p.L5308Ifs*18|1|0.12|ENSG00000054654|chr14:64158750-64158751|GG/-|frameshift_variant;SYNE2|p.M1669Wfs*6|1|0.36|ENSG00000054654|chr14:64017707-64017707|A/-|frameshift_variant;SYNE2|p.N1656Mfs*19|1|0.18|ENSG00000054654|chr14:64017669-64017669|A/-|frameshift_variant;SYNE2|p.S1830Kfs*9|1|0.34|ENSG00000054654|chr14:64021985-64021986|-/A|frameshift_variant;SYNE2|p.S6651Rfs*83|1|0.29|ENSG00000054654|chr14:64220596-64220597|-/G|frameshift_variant	88.17693792209575	0.04527150213038833	6				NaN	NaN	0	NaN	10674	3739	14413
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14416	36.976	NaN	5971.3	30	0	967.7	0.106	+			45709	VAALGAVG	8	57	329.2005177326421	656.3864825320842	2	329.20135498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VAALGAVG_	ENST00000005340.9_1_17:7137535-7137610:-|nuORF	10.184766708764876	0.7843118145031319	6				NaN	NaN	0	NaN	10675	3739	14413
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14417	36.978	NaN	7796.2	30	0	1003.6	0.106	+			46603	VFSCGPPGMTK	11	70	590.7770701592616	1179.539587385323	2	590.7786254882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_VFSC(Carbamidomethyl (C))GPPGMTK_	ENSG00000137857|ENST00000389037|DUOX1;ENSG00000140279|ENST00000389039|DUOX2;ENST00000561220.6_1_15:45434150-45457096:+|nuORF;nc|ENSG00000137857|Q9NRD9-2|DUOX1;nc|ENSG00000140279|Q9NRD8|DUOX2	89.02883481214508	0.10275031849113642	6				NaN	NaN	0	NaN	10676	3739	14413
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14418	36.98	NaN	13064	30	0	1409.7	0.106	+			9089	EGIPRAGLS	9	68	450.2514197087938	898.4882864843876	2	450.2525939941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EGIPRAGLS_	ENST00000560255.2_1_15:80216218-80216353:+|nuORF	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	10677	3739	14413
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14419	36.982	NaN	11599	30	0	2462.1	0.106			+	26754	LVPARPHWE	9	83	552.80321312977	1103.59187332634	2	552.8053588867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LVPARPHWE_	REV__ENSG00000127837|ENST00000248450|AAMP;REV__ENST00000465442.1_1_2:219130391-219131358:-|nuORF;REV__ENST00000475678.5_1_2:219131145-219134809:-|nuORF;REV__ENST00000489767.5_1_2:219130391-219134818:-|nuORF	82.7504851949679	0.08565546331141553	6				NaN	NaN	0	NaN	10678	3739	14413
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14420	36.983	NaN	3254.2	30	0	295.92	0.033				-1	 	0	60	436.23591989568536	870.4572868581707	2	436.23699951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10679	3739	14413
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14436	37.017	NaN	11688	30	0	1385.5	0.214			+	12727	GEKTRAQR	8	71	473.2649499023916	944.5153468715832	2	473.26580810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEKTRAQR_	REV__ENST00000261318.4_1_12:117152555-117152831:-|nuORF	54.776311868738084	0.5534952410049249	6				NaN	NaN	0	NaN	10692	3742	14435
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14437	37.02	NaN	14617	30	0	3023.9	0.106	+			51364	YTFFSARL	8	80	502.7656411686482	1003.5167294040964	2	502.7665100097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YTFFSARL_	ENST00000504771.2_1_5:118691243-118691579:+|nuORF	93.19546047674547	0.2677966331495483	6				NaN	NaN	0	NaN	10693	3742	14435
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14438	37.022	NaN	13941	30	0	2112.8	0.106	+			49673	VYITRAQLM	9	82	547.8053963635706	NaN	0	547.8050537109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYITRAQLM_	ENSG00000160877|ENST00000292431|NACC1	82.7504851949679	0.061958946529908215	6				NaN	NaN	0	NaN	10694	3742	14435
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14439	37.024	NaN	12425	30	0	3134.1	0.106				-1	LEQMALPIL	9	70	535.3021810610193	1068.5898091888384	2	535.3040161132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LEQMALPIL_	ENST00000554126.5_1_14:71884901-71995420:+|nuORF	34.172542307311794	0.4838870758800184	6				NaN	NaN	0	NaN	10695	3742	14435
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14440	37.026	NaN	11892	30	0	2094.3	0.106				-1	 	0	75	450.2803241166443	898.5460953000886	2	450.2813415527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10696	3742	14435
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14441	37.028	NaN	15960	30	0	2677.5	0.037	+			21669	KQALKYFNL	9	94	562.8255011278204	1123.6364493224407	2	562.8267822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KQALKYFNL_	ENSG00000071537|ENST00000336735|SEL1L	104.74654710444128	0.034358562718640136	6				NaN	NaN	0	NaN	10697	3742	14435
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14442	37.028	NaN	6493.9	30	0	1369.4	0.144	+			37943	SPEGRLYQVEY	11	82	670.8261299238968	1339.6377069145935	2	670.8274536132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SPEGRLYQVEY_	ENSG00000041357|ENST00000044462|PSMA4;ENSG00000100902|ENST00000261479|PSMA6;ENST00000554843.5_1_14:35761682-35780127:+|nuORF;ENST00000556167.1_1_14:35761682-35777333:+|nuORF;ENST00000557929.5_1_15:78834269-78838932:+|nuORF	59.26467630326872	0.33001889715770233	6				NaN	NaN	0	NaN	10698	3742	14435
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14457	37.062	NaN	30115	30	0	3835.5	0.214			+	25742	LRYQNETTI	9	88	569.2992590132924	1136.5839650933847	2	569.3013916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LRYQNETTI_	REV__ENSG00000002822|ENST00000265854|MAD1L1;REV__nc|ENSG00000002822|Q9Y6D9-3|MAD1L1;REV__nc|ENSG00000002822|Q9Y6D9-4|MAD1L1	93.19546047674547	0.05585629608842056	6				NaN	NaN	0	NaN	10710	3745	14456
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14458	37.065	NaN	20220	30	0	3063.1	0.106				-1	YEIYMIVY	8	85	555.2653813907448	1108.5162098482895	2	555.2674560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_YEIYM(Oxidation (M))IVY_	ENST00000553544.1_1_14:35465915-35466038:+|nuORF	52.29916861842294	0.578018602984656	6				NaN	NaN	0	NaN	10711	3745	14456
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14459	37.067	NaN	13002	30	0	2020.6	0.106	+			42464	TAMFIASKY	9	78	516.2635819615609	1030.5126109899218	2	516.2654418945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TAMFIASKY_	ENSG00000134057|ENST00000256442|CCNB1;nc|ENSG00000134057|P14635-2|CCNB1	101.45984612302182	0.0377122763612125	6				NaN	NaN	0	NaN	10712	3745	14456
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14460	37.069	NaN	13278	30	0	2802.4	0.106				-1	 	0	79	469.7856972633889	937.5568415935778	2	469.78704833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10713	3745	14456
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14461	37.071	NaN	10856	30	0	825.21	0.106	+			38574	SSFQFSIQK	9	77	536.277229569519	1070.539906205838	2	536.2780151367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SSFQFSIQK_	ENSG00000149636|ENST00000373750|DSN1;nc|ENSG00000149636|Q9H410-2|DSN1;nc|ENSG00000149636|Q9H410-3|DSN1;nc|ENSG00000149636|Q9H410-4|DSN1	99.01295224348159	0.040209060045561164	6				NaN	NaN	0	NaN	10714	3745	14456
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14462	37.073	NaN	7802.6	30	0	950.8	0.036			+	28734	NNSFNIEAF	9	70	528.2437885359286	1054.4730241386571	2	528.2456665039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NNSFNIEAF_	REV__tr|U7SWL0|U7SWL0_FUSNUYkuDdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01081PE=4SV=1	37.15910966729921	0.4535818937225704	6				NaN	NaN	0	NaN	10715	3745	14456
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14463	37.073	NaN	30278	30	0	13171	0.143				-1	YEQTFSVWM	9	81	603.7600926747361	1205.5056324162722	2	603.7627563476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_YEQTFSVWM(Oxidation (M))_	ENSG00000080854|ENST00000533871|IGSF9B;IGSF9B|p.T1083Hfs*72|2|0.42|ENSG00000080854|chr11:133920478-133920479|-/G|frameshift_variant;IGSF9B|p.T1083Pfs*48|1|0.11|ENSG00000080854|chr11:133920479-133920479|G/-|frameshift_variant;nc|ENSG00000080854|Q9UPX0|IGSF9B	51.33545320467046	0.2872990594074956	6				NaN	NaN	0	NaN	10716	3745	14456
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14481	37.113	NaN	85542	30	0	10321	0.214	+			18441	ISCVNLAFK	9	106	526.2820760821944	1050.5495992311887	2	526.2841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_ISC(Carbamidomethyl (C))VNLAFK_	ENST00000227758.6_3_11:102219989-102220022:+|nuORF	204.624747049445	1.3753862112523631E-05	6				NaN	NaN	0	NaN	10731	3748	14480
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14482	37.117	NaN	11647	30	0	1250.6	0.106			+	-1	TCTIPILIV	9	87	507.79908432700597	1013.583615720812	2	507.8008117675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))TCTIPILIV_	REV__RMDN2|p.F331Efs*33|1|0.12|ENSG00000115841|chr2:37997459-37997462|TGTT/-|frameshift_variant	60.29395666154354	0.21116425950210296	6				NaN	NaN	0	NaN	10732	3748	14480
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14483	37.119	NaN	28661	30	0	3618.3	0.106				-1	 	0	88	439.75694150456223	877.4993300759245	2	439.7580871582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10733	3748	14480
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14484	37.12	NaN	15236	30	0	2347.3	0.106			+	4905	ATQIMGGRD	9	87	474.7325053659718	947.4504577987436	2	474.7337341308594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATQIMGGRD_	REV__ENSG00000143851|ENST00000691036|PTPN7;REV__nc|ENSG00000143851|P35236-2|PTPN7;REV__nc|ENSG00000143851|P35236-3|PTPN7	85.16082228582465	0.07850854922700509	6				NaN	NaN	0	NaN	10734	3748	14480
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14485	37.122	NaN	9407.1	30	0	4780.1	0.106				-1	ENMNPDGMVAL	11	61	402.8424025496197	1205.505378249059	3	402.84381103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_ENM(Oxidation (M))NPDGMVAL_	ENSG00000133112|ENST00000530705|TPT1;nc|ENSG00000133112|P13693-2|TPT1	36.31764250033197	0.6083289427130232	6				NaN	NaN	0	NaN	10735	3748	14480
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14486	37.124	NaN	7977.1	30	0	619.61	0.038				-1	KHYNETSNMS	10	83	613.7592059428218	1225.5038589524436	2	613.7613525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_KHYNETSNM(Oxidation (M))S_	ENSG00000110723|ENST00000265843|EXPH5;EXPH5|p.P345Qfs*45|1|0.43|ENSG00000110723|chr11:108514475-108514475|A/-|frameshift_variant;nc|ENSG00000110723|Q8NEV8-2|EXPH5	51.19269402634007	0.44601001148513897	6				NaN	NaN	0	NaN	10736	3748	14480
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14487	37.125	NaN	8150.5	30	0	700.01	0.141	+			11100	FFGLTLPNY	9	84	536.277229569519	1070.539906205838	2	536.2781982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FFGLTLPNY_	ENSG00000170482|ENST00000348729|SLC23A1;nc|ENSG00000170482|Q9UHI7-2|SLC23A1;nc|ENSG00000170482|Q9UHI7-3|SLC23A1	65.80317337860623	0.1652391959156183	6				NaN	NaN	0	NaN	10737	3748	14480
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14505	37.164	NaN	24594	30	0	5063.9	0.214			+	1449	AFAIWRML	8	79	504.2779059206637	1006.5412589081275	2	504.2796936035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AFAIWRML_	REV__ENSG00000109066|ENST00000335464|TMEM104;REV__TMEM104|p.F356Sfs*19|1|0.13|ENSG00000109066|chr17:74836259-74836259|T/-|frameshift_variant;REV__TMEM104|p.V362Sfs*13|1|0.42|ENSG00000109066|chr17:74836276-74836276|C/-|frameshift_variant	62.97842346883844	0.4722955155785405	6				NaN	NaN	0	NaN	10752	3751	14504
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14506	37.168	NaN	14741	30	0	1171.5	0.106	+			6551	AYINRASLL	9	81	510.79360918618767	1019.5726654391754	2	510.79547119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AYINRASLL_	ENSG00000138663|ENST00000264389|COPS4;nc|ENSG00000138663|Q9BT78-2|COPS4	93.1432384553994	0.056003526918089595	6				NaN	NaN	0	NaN	10753	3751	14504
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14507	37.17	NaN	13863	30	0	1177.7	0.106	+			49683	VYKETCISF	9	85	573.7774324875797	1145.5403120419594	2	573.779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_VYKETC(Carbamidomethyl (C))ISF_	ENSG00000127324|ENST00000247829|TSPAN8;ENST00000552128.2_1_12:71519116-71532942:-|nuORF	88.17693792209575	0.07000514020414955	6				NaN	NaN	0	NaN	10754	3751	14504
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14508	37.171	NaN	20734	30	0	3843.8	0.106	+			50878	YFLDNDKYI	9	87	595.7897680871748	1189.5649832411495	2	595.7919311523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YFLDNDKYI_	tr|U7SV19|U7SV19_FUSNU4-methyl-5(B-hydroxyethyl)-thiazolemonophosphatebiosynthesisproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01481PE=4SV=1	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	10755	3751	14504
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14509	37.173	NaN	10010	30	0	2344.4	0.106	+			23231	KYGSVTVW	8	77	470.2494251766498	938.4842974200997	2	470.25018310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KYGSVTVW_	ENSG00000149923|ENST00000279387|PPP4C;ENST00000566749.5_1_16:30094185-30096380:+|nuORF;ENST00000567040.5_1_16:30087698-30094972:+|nuORF	53.351449002276354	0.5676011784961348	6				NaN	NaN	0	NaN	10756	3751	14504
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14510	37.175	NaN	11439	30	0	959.46	0.036	+			42812	TEAQANQISL	10	85	537.7738394058061	1073.5331258784122	2	537.7755737304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TEAQANQISL_	ENSG00000110442|ENST00000263401|COMMD9;nc|ENSG00000110442|Q9P000-2|COMMD9	109.82975700811294	0.04850514657194457	6				NaN	NaN	0	NaN	10757	3751	14504
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14511	37.176	NaN	7087	30	0	424.5	0.139	+			23657	LARRVRSD	8	76	486.7881137474219	971.5616745616438	2	486.7896728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LARRVRSD_	ENSG00000176624|ENST00000406189|MEX3C;ENSG00000183496|ENST00000329713|MEX3B;ENST00000558133.1_1_15:82335503-82336997:-|nuORF	47.91560031466742	0.6071945918984287	6				NaN	NaN	0	NaN	10758	3751	14504
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14529	37.212	NaN	841070	30	0	168030	0.123				-1	 	0	69	524.8093301389915	1047.604107344783	2	524.81103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10773	3754	14528
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14530	37.214	NaN	26092	30	0	1698.9	0.106	+			20011	KEIGELTQL	9	97	515.7916004358116	1029.568647938423	2	515.7930297851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEIGELTQL_	ENSG00000148484|ENST00000345264|RSU1;ENST00000464074.6_1_10:16769067-16859404:-|nuORF;nc|ENSG00000148484|Q15404-2|RSU1	91.26522074875469	0.06129826844580791	6				NaN	NaN	0	NaN	10774	3754	14528
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14531	37.216	NaN	8614.9	30	0	765.39	0.106				-1	 	0	81	501.3013502066279	1000.5881474800558	2	501.3028869628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10775	3754	14528
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14532	37.218	NaN	9281.1	30	0	1542.7	0.106			+	-1	YVRSESALPC	10	79	591.2836752452921	1180.552797557384	2	592.2909545898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_YVRSESALPC(Carbamidomethyl (C))_	REV__ENSG00000124155|ENST00000279036|PIGT;REV__nc|ENSG00000124155|Q969N2-2|PIGT;REV__nc|ENSG00000124155|Q969N2-3|PIGT;REV__nc|ENSG00000124155|Q969N2-4|PIGT;REV__nc|ENSG00000124155|Q969N2-5|PIGT;REV__nc|ENSG00000124155|Q969N2-6|PIGT	47.657333605630114	0.47858658696240314	6				NaN	NaN	0	NaN	10776	3754	14528
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14533	37.22	NaN	10284	30	0	1363.3	0.106				-1	IMTVAKEKM	9	81	541.7836428987782	1081.5527328643564	2	541.7855224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Oxidation (M)	_IM(Oxidation (M))TVAKEKM(Oxidation (M))_	ENSG00000131018|ENST00000367255|SYNE1;ENST00000461872.6_1_6:152697909-152949466:-|nuORF;nc|ENSG00000131018|Q8NF91-10|SYNE1;nc|ENSG00000131018|Q8NF91-4|SYNE1;nc|ENSG00000131018|Q8NF91-7|SYNE1;SYNE1|p.A3854Lfs*20|1|0.4|ENSG00000131018|chr6:152352048-152352048|T/-|frameshift_variant;SYNE1|p.E4738Kfs*25|1|0.12|ENSG00000131018|chr6:152330474-152330474|T/-|frameshift_variant;SYNE1|p.E5862Gfs*83|1|0.12|ENSG00000131018|chr6:152300729-152300738|CCAGACTCCT/-|frameshift_variant;SYNE1|p.G6773Wfs*7|1|0.44|ENSG00000131018|chr6:152236186-152236187|-/A|frameshift_variant;SYNE1|p.K3606Sfs*5|1|0.25|ENSG00000131018|chr6:152354768-152354768|T/-|frameshift_variant;SYNE1|p.K6871Rfs*22|2|0.52|ENSG00000131018|chr6:152233881-152233881|T/-|frameshift_variant;SYNE1|p.L8283Pfs*8|1|0.19|ENSG00000131018|chr6:152148173-152148174|-/G|frameshift_variant;SYNE1|p.M5602Nfs*13|2|0.32|ENSG00000131018|chr6:152310779-152310780|-/T|frameshift_variant;SYNE1|p.V8635Sfs*12|1|0.15|ENSG00000131018|chr6:152133375-152133375|T/-|frameshift_variant	39.252832667884924	0.4290233611298554	6				NaN	NaN	0	NaN	10777	3754	14528
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14534	37.222	NaN	8925.7	30	0	584.05	0.106	+			27010	LYQVVSQRF	9	85	570.3142406070494	NaN	0	570.3146362304688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LYQVVSQRF_	ENST00000493220.5_2_17:29556858-29657521:+|nuORF;nc|ENSG00000196712|P21359-2|NF1;nc|ENSG00000196712|P21359-6|NF1	92.23892857375223	0.037083009022581055	6				NaN	NaN	0	NaN	10778	3754	14528
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14535	37.223	NaN	31940	30	0	7409	0.106			+	28244	NDHPSLQVLI	10	88	379.2084368489117	1134.603481146935	3	379.2095642089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NDHPSLQVLI_	REV__DENND4A|p.K1156Nfs*49|1|0.32|ENSG00000174485|chr15:65690994-65690994|T/-|frameshift_variant;REV__DENND4A|p.M800Cfs*75|1|0.33|ENSG00000174485|chr15:65702337-65702337|T/-|frameshift_variant;REV__DENND4A|p.S1755Vfs*10|1|0.47|ENSG00000174485|chr15:65664687-65664687|T/-|frameshift_variant;REV__ENSG00000174485|ENST00000443035|DENND4A;REV__ENST00000568515.1_1_15:66007788-66048788:-|nuORF;REV__nc|ENSG00000174485|Q7Z401-2|DENND4A;REV__nc|ENSG00000174485|Q7Z401|DENND4A	35.15202426646627	0.5927656479315102	6				NaN	NaN	0	NaN	10779	3754	14528
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14536	37.225	NaN	7174.8	30	0	897.89	0.035	+			23826	LCSPLLWR	8	78	494.2745909389566	986.5346289447132	2	494.27734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_LCSPLLWR_	ENST00000497932.5_1_9:128201168-128209649:-|nuORF	47.91560031466742	0.6071945918984287	6				NaN	NaN	0	NaN	10780	3754	14528
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14554	37.262	NaN	22084	30	0	4579.8	0.214	+			35925	SEFYKHIVL	9	85	568.3087183374154	1134.6028837416306	2	568.3111572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEFYKHIVL_	ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2	79.71258880314673	0.09879134589249085	6				NaN	NaN	0	NaN	10795	3757	14553
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14555	37.265	NaN	15497	30	0	1575.9	0.106	+			18571	ISPATPNMQ	9	80	479.7371498806455	957.459746828091	2	479.7383728027344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ISPATPNMQ_	CCDC66|p.A265Sfs*9|1|0.15|ENSG00000180376|chr3:56567024-56567025|-/A|frameshift_variant;CCDC66|p.T207Nfs*2|2|0.31|ENSG00000180376|chr3:56566661-56566662|-/A|frameshift_variant;CCDC66|p.V732*|1|0.25|ENSG00000180376|chr3:56617454-56617454|A/-|frameshift_variant;ENSG00000180376|ENST00000394672|CCDC66;ENST00000422788.5_1_3:56595403-56599181:+|nuORF;ENST00000469966.1_1_3:56592935-56598176:+|nuORF;ENST00000472582.5_1_3:56591255-56599181:+|nuORF;nc|ENSG00000180376|A2RUB6-2|CCDC66;nc|ENSG00000180376|A2RUB6-3|CCDC66;nc|ENSG00000180376|A2RUB6-4|CCDC66	58.78195531508484	0.22376836668196862	6				NaN	NaN	0	NaN	10796	3757	14553
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14556	37.267	NaN	16628	30	0	2279.2	0.106				-1	 	0	89	454.2646083497295	906.514663766259	2	454.2657470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10797	3757	14553
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14557	37.269	NaN	4858.9	30	0	2080.7	0.106			+	19528	KAVSKSSR	8	52	431.7597260804855	861.504899227771	2	431.7606506347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KAVSKSSR_	REV__ENSG00000145757|ENST00000274432|SPATA9;REV__nc|ENSG00000145757|Q9BWV2-3|SPATA9	29.14955571784316	0.7342621283720113	6				NaN	NaN	0	NaN	10798	3757	14553
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14558	37.271	NaN	3492.6	30	0	355.13	0.106	+			1439	AEYPAVKF	8	64	462.7433392406733	923.4721255481467	2	462.74462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AEYPAVKF_	ENSG00000136940|ENST00000259467|PDCL;nc|ENSG00000136940|Q13371-2|PDCL	53.351449002276354	0.5676011784961348	6				NaN	NaN	0	NaN	10799	3757	14553
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14559	37.273	NaN	4820.5	30	0	1312.6	0.037			+	-1	ILSDRMSTAI	10	80	561.7963233505918	1121.5780937679835	2	562.2955322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_ILSDRM(Oxidation (M))STAI_	REV__ENSG00000242372|ENST00000374450|EIF6;REV__nc|ENSG00000242372|P56537-2|EIF6	45.97224482568171	0.49411383603842696	6				NaN	NaN	0	NaN	10800	3757	14553
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14560	37.273	NaN	4743.4	30	0	373.1	0.142			+	31292	QIFMMHKQL	9	83	588.3068577221097	1174.5991625110194	2	588.3082275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QIFMMHKQL_	REV__ENSG00000189375|ENST00000405044|TBC1D28;REV__ENSG00000214946|ENST00000437605|TBC1D26;REV__nc|ENSG00000214946|Q86UD7-2|TBC1D26;REV__nc|ENSG00000214946|Q86UD7|TBC1D26	41.42661286455405	0.403525789677298	6				NaN	NaN	0	NaN	10801	3757	14553
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14576	37.308	NaN	61766	30	0	20571	0.211	+			26752	LVNNPSMPTQ	10	88	550.773975740488	1099.533398547776	2	550.7760620117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LVNNPSMPTQ_	ENSG00000184564|ENST00000647374|SLITRK6;SLITRK6|p.G568C|1|0.26|ENSG00000184564|chr13:85794807-85794807|C/A|missense_variant;SLITRK6|p.R599Hfs*12|1|0.16|ENSG00000184564|chr13:85794713-85794713|C/-|frameshift_variant	72.87924865735499	0.25379688738724415	6				NaN	NaN	0	NaN	10814	3760	14575
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14577	37.312	NaN	10367	30	0	1800.6	0.106	+			28667	NLSAQDHQTF	10	75	601.7756104150614	1201.5366678969226	2	601.7774658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))NLSAQDHQTF_	ENSG00000004866|ENST00000323984|ST7;ENSG00000007341|ENST00000358039|ST7L;ENST00000463235.5_1_1:113098633-113162595:-|nuORF;ENST00000479436.5_1_1:113134145-113161558:-|nuORF;ENST00000480988.5_1_1:113119662-113161548:-|nuORF;ENST00000487459.5_1_7:116660544-116830896:+|nuORF;ENST00000489293.5_1_7:116770554-116838385:+|nuORF;ENST00000497235.5_1_1:113125066-113140698:-|nuORF;ENST00000497457.5_1_1:113121036-113161548:-|nuORF;nc|ENSG00000004866|Q9NRC1-2|ST7;nc|ENSG00000004866|Q9NRC1-3|ST7;nc|ENSG00000004866|Q9NRC1-4|ST7;nc|ENSG00000004866|Q9NRC1-5|ST7;nc|ENSG00000004866|Q9NRC1-6|ST7;nc|ENSG00000004866|Q9NRC1-7|ST7;nc|ENSG00000004866|Q9NRC1|ST7;nc|ENSG00000007341|Q8TDW4-2|ST7L;nc|ENSG00000007341|Q8TDW4-3|ST7L;nc|ENSG00000007341|Q8TDW4-4|ST7L;nc|ENSG00000007341|Q8TDW4-5|ST7L;nc|ENSG00000007341|Q8TDW4-6|ST7L;nc|ENSG00000007341|Q8TDW4-7|ST7L;nc|ENSG00000007341|Q8TDW4-8|ST7L;ST7L|p.A541Cfs*2|1|0.05|ENSG00000007341|chr1:112541959-112541960|-/A|frameshift_variant;ST7L|p.M420Ifs*18|1|0.1|ENSG00000007341|chr1:112556004-112556005|-/CAAAAGT|frameshift_variant	84.9155231211612	0.16018353804806162	6				NaN	NaN	0	NaN	10815	3760	14575
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14578	37.314	NaN	5008.4	30	0	1044.7	0.106	+			34983	SAAPRPPRR	9	51	336.5344378546052	NaN	0	336.5341796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAAPRPPRR_	SOX9|p.P307Cfs*77|1|0.27|ENSG00000125398|chr17:72123772-72123773|-/GT|frameshift_variant;SOX9|p.V291Afs*92|1|0.55|ENSG00000125398|chr17:72123729-72123729|T/-|frameshift_variant;SOX9|p.V306Cfs*77|2|0.32|ENSG00000125398|chr17:72123769-72123769|G/-|frameshift_variant	23.04248740728303	0.3589936788096251	6				NaN	NaN	0	NaN	10816	3760	14575
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14579	37.316	NaN	8952.9	30	0	4708.9	0.106	+			51037	YLALFFFLL	9	58	382.8911960026471	1145.6517586081413	3	382.89227294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YLALFFFLL_	ENSG00000164112|ENST00000643802|SMIM43	37.15910966729921	0.4535818937225704	6				NaN	NaN	0	NaN	10817	3760	14575
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14580	37.318	NaN	7554	30	0	635.69	0.106	+			32833	RCLLRKNLM	9	90	573.8334138468479	1145.6522747604956	2	573.8351440429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RCLLRKNLM_	ENST00000478296.5_1_3:75787041-75787971:-|nuORF	37.81151784470057	0.4459294069877048	6				NaN	NaN	0	NaN	10818	3760	14575
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14581	37.319	NaN	6010.4	30	0	592.39	0.035				-1	 	0	80	518.2937195398731	1034.5728861465461	2	518.2952270507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10819	3760	14575
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14582	37.32	NaN	7347.5	30	0	1941.2	0.139				-1	 	0	72	468.26185560417116	934.5091582751423	2	468.2629699707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10820	3760	14575
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14600	37.359	NaN	24592	30	0	3447.8	0.214	+			33201	REYQELMNV	9	91	591.2836752452921	1180.552797557384	2	591.2848510742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_REYQELMNV_	CON__H-INV:HIT000292931;CON__P05787;CON__Q8BGZ7;CON__Q9H552;ENSG00000170421|ENST00000692008|KRT8;ENST00000409686.2_1_9:102067468-102068890:+|nuORF;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;ENST00000547031.5_1_12:53292389-53294972:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	76.16968421966216	0.11411088698345859	6				NaN	NaN	0	NaN	10835	3763	14599
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14601	37.363	NaN	13262	30	0	1305.9	0.106	+			15256	GTTEWFHLK	9	83	559.7850896018579	NaN	0	559.7852783203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTTEWFHLK_	ENSG00000092929|ENST00000207549|UNC13D;ENST00000591563.5_1_17:73828844-73835996:-|nuORF;nc|ENSG00000092929|Q70J99-3|UNC13D	79.71258880314673	0.07236858429579222	6				NaN	NaN	0	NaN	10836	3763	14599
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14602	37.365	NaN	12990	30	0	2716.5	0.106				-1	LIKCLQAVC	9	61	368.86865565851826	1103.5841375757548	3	368.8697814941406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_LIKC(Carbamidomethyl (C))LQAVC(Carbamidomethyl (C))_	chr19:18402796-18427351|283|18.57|0.59|4.97|+|1|TE_info:LTR5B,LTR5B_dup345,ERVK,LTR,donor,+,18402468,18402796|None,SSBP4|4	27.882242232435846	0.5426732730940306	6				NaN	NaN	0	NaN	10837	3763	14599
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14603	37.367	NaN	10986	30	0	3771.6	0.106			+	8162	EAAKQNVKSL	10	80	544.3093613908972	1086.6041698485942	2	544.3117065429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EAAKQNVKSL_	REV__ENSG00000184432|ENST00000333188|COPB2;REV__nc|ENSG00000184432|P35606-2|COPB2	45.908116695636124	0.4947047446361497	6				NaN	NaN	0	NaN	10838	3763	14599
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14604	37.369	NaN	12350	30	0	1447.6	0.106			+	23869	LDEVRKLEG	9	75	529.7956560041749	NaN	0	529.7959594726562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LDEVRKLEG_	REV__ENSG00000224470|ENST00000427980|ATXN1L	58.22992032128504	0.15686832049467786	6				NaN	NaN	0	NaN	10839	3763	14599
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14605	37.37	NaN	8171.1	30	0	707.84	0.035	+			37802	SMFTAILKK	9	71	519.8043497207924	NaN	0	519.8045654296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SMFTAILKK_	ENSG00000198589|ENST00000651943|LRBA;LRBA|p.L2590*|1|0.41|ENSG00000198589|chr4:150310342-150310342|A/-|frameshift_variant;LRBA|p.T2011Qfs*11|1|0.19|ENSG00000198589|chr4:150599022-150599022|T/-|frameshift_variant;nc|ENSG00000198589|P50851-2|LRBA;nc|ENSG00000198589|P50851|LRBA	107.00750918261382	0.012399597248013027	6				NaN	NaN	0	NaN	10840	3763	14599
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14606	37.371	NaN	17269	30	0	3287.7	0.139				-1	 	0	81	473.2828929445046	944.5512329558093	2	473.2843322753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10841	3763	14599
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14624	37.41	NaN	19195	30	0	3818.3	0.214	+			12173	GALTRVALEAP	11	88	366.54881714566073	1096.6246220371822	3	366.54986572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GALTRVALEAP_	ENSG00000159433|ENST00000290607|STARD9	29.170058357718403	0.683821074385409	6				NaN	NaN	0	NaN	10856	3766	14623
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14625	37.414	NaN	8893.7	30	0	1878.1	0.106	+			30248	PSWGDQAL	8	63	437.2087582350193	872.4029635368386	2	437.2099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PSWGDQAL_	ENST00000600328.7_1_19:18376706-18377168:-|nuORF	47.91560031466742	0.6071945918984287	6				NaN	NaN	0	NaN	10857	3766	14623
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14626	37.416	NaN	7523	30	0	732.15	0.106			+	25218	LMPRCNGKL	9	82	516.2778908491986	1030.541228765197	2	516.2798461914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LMPRCNGKL_	REV__ENST00000451424.1_1_1:20974977-20975394:-|nuORF	68.78682469695295	0.14603441672067394	6				NaN	NaN	0	NaN	10858	3766	14623
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14627	37.418	NaN	12111	30	0	1348.8	0.106				-1	HMLNGALLAL	10	84	547.8061359025842	1093.5977188719683	2	547.8082275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))HMLNGALLAL_	ENSG00000157600|ENST00000372068|TMEM164;nc|ENSG00000157600|Q5U3C3-2|TMEM164	44.116797842482775	0.5112108506279902	6				NaN	NaN	0	NaN	10859	3766	14623
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14628	37.42	NaN	9935.6	30	0	2379.4	0.106				-1	 	0	75	534.2903840509136	533.2831075843136	1	534.29248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10860	3766	14623
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14629	37.421	NaN	5960.2	30	0	483.29	0.035	+			46606	VFSLGSVISN	10	74	511.7779509622712	1021.5413489913424	2	511.77935791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VFSLGSVISN_	ENSG00000135226|ENST00000335568|UGT2B28;ENSG00000213759|ENST00000446444|UGT2B11;nc|ENSG00000135226|Q9BY64-2|UGT2B28	40.77816245573522	0.5419747034533848	6				NaN	NaN	0	NaN	10861	3766	14623
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14630	37.422	NaN	3900.2	30	0	617.59	0.139				-1	 	0	65	484.2626255451147	966.5106981570294	2	484.263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10862	3766	14623
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14648	37.46	NaN	186970	30	0	56703	0.141			+	27478	MLTRMNKT	8	85	505.759834581094	1009.5051162289881	2	505.7615661621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_MLTRM(Oxidation (M))NKT_	REV__SPNS2|p.T226M|1|0.38|ENSG00000183018|chr17:4530735-4530735|C/T|missense_variant	68.78682469695295	0.41700713582915416	6				NaN	NaN	0	NaN	10877	3769	14647
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14649	37.463	NaN	83376	30	0	43259	0.106	+			1059	AEKRSLMLQ	9	101	359.202483705202	1074.585621715806	3	359.2037353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEKRSLMLQ_	GLI3|p.V1045M|1|0.35|ENSG00000106571|chr7:41965940-41965940|C/T|missense_variant	70.8162118820467	0.13725933411854815	6				NaN	NaN	0	NaN	10878	3769	14647
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14650	37.465	NaN	67973	30	0	11957	0.106				-1	 	0	100	593.8537501320611	1185.6929473309222	2	593.8555908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10879	3769	14647
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14651	37.466	NaN	22184	30	0	1558	0.106			+	46260	VEGFQFASVI	10	91	548.787039252903	1095.559525572606	2	548.7891845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VEGFQFASVI_	REV__ENSG00000111670|ENST00000299314|GNPTAB;REV__GNPTAB|p.F1228Lfs*5|2|0.13|ENSG00000111670|chr12:101749110-101749110|A/-|frameshift_variant;REV__nc|ENSG00000111670|Q3T906-2|GNPTAB	77.31757898189308	0.2175361111083648	6				NaN	NaN	0	NaN	10880	3769	14647
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14652	37.468	NaN	7790.2	30	0	961.14	0.106	+			11779	FSLWITTVI	9	82	540.3082797727354	1078.6020066122708	2	540.3084106445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FSLWITTVI_	ENST00000347869.7_1_3:50142512-50142999:+|nuORF	53.351449002276354	0.2690372970092375	6				NaN	NaN	0	NaN	10881	3769	14647
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14653	37.47	NaN	7482.8	30	0	2211.3	0.106	+			8825	EELLFSHKL	9	74	558.3060586010577	1114.5975642689152	2	558.308837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EELLFSHKL_	ENSG00000099290|ENST00000282633|WASHC2A;ENSG00000172661|ENST00000623400|WASHC2C;ENST00000374359.1_1_10:46274511-46281094:+|nuORF;nc|ENSG00000099290|Q641Q2-2|WASHC2A;nc|ENSG00000172661|Q9Y4E1-1|WASHC2C;nc|ENSG00000172661|Q9Y4E1-2|WASHC2C;nc|ENSG00000172661|Q9Y4E1-3|WASHC2C;nc|ENSG00000172661|Q9Y4E1-4|WASHC2C;nc|ENSG00000172661|Q9Y4E1-5|WASHC2C;nc|ENSG00000172661|Q9Y4E1-6|WASHC2C	112.41091882917199	0.026537921851008135	6				NaN	NaN	0	NaN	10882	3769	14647
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14654	37.472	NaN	12253	30	0	1159.3	0.034	+			26139	LSPVHVWS	8	82	462.75012254797025	923.4856921627405	2	462.7500305175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSPVHVWS_	ENST00000528907.5_1_11:62445692-62446470:-|nuORF	65.80317337860623	0.44433089765398776	6				NaN	NaN	0	NaN	10883	3769	14647
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14655	37.472	NaN	4800.2	30	0	1179.1	0.143			+	5156	ATSVSPAL	8	63	373.20987774270935	NaN	0	373.2096252441406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	Unmodified	_ATSVSPAL_	REV__ENST00000293880.9_1_11:57100225-57103093:-|nuORF;REV__ENST00000526696.6_1_11:57102106-57102814:-|nuORF	37.028477286268924	1.7418937515398478	6				NaN	NaN	0	NaN	10884	3769	14647
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14673	37.512	NaN	17104	30	0	2311.6	0.214			+	8016	DTMSRSTTL	9	93	514.2400116206271	1026.4654703080541	2	514.2413940429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_DTM(Oxidation (M))SRSTTL_	REV__ENSG00000196218|ENST00000359596|RYR1;REV__nc|ENSG00000196218|P21817-2|RYR1;REV__nc|ENSG00000196218|P21817-3|RYR1;REV__RYR1|p.C1268Afs*4|1|0.14|ENSG00000196218|chr19:38473407-38473407|C/-|frameshift_variant;REV__RYR1|p.D2713Tfs*33|1|0.11|ENSG00000196218|chr19:38504811-38504811|C/-|frameshift_variant;REV__RYR1|p.G249Efs*16|1|0.37|ENSG00000196218|chr19:38446709-38446709|G/-|frameshift_variant;REV__RYR1|p.P3303Tfs*8|1|0.36|ENSG00000196218|chr19:38517571-38517572|-/C|frameshift_variant	84.9155231211612	0.07920012719736333	6				NaN	NaN	0	NaN	10899	3772	14672
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14674	37.515	NaN	20102	30	0	3521.5	0.106				-1	 	0	68	422.75940534496715	843.5042577567343	2	422.7601623535156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10900	3772	14672
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14675	37.517	NaN	6460.2	30	0	1244.8	0.106			+	2759	ARGSVAAMI	9	65	438.242655054195	874.47075717519	2	438.2435302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ARGSVAAMI_	REV__ANKRD17|p.L2249Yfs*84|1|0.34|ENSG00000132466|chr4:73090884-73090884|G/-|frameshift_variant;REV__ENSG00000132466|ENST00000358602|ANKRD17;REV__ENST00000514252.1_1_4:73978989-74017230:-|nuORF;REV__nc|ENSG00000132466|O75179-3|ANKRD17;REV__nc|ENSG00000132466|O75179-7|ANKRD17	44.116797842482775	0.37197099687881774	6				NaN	NaN	0	NaN	10901	3772	14672
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14676	37.519	NaN	6419.7	30	0	642.65	0.106				-1	 	0	72	528.3248403505739	1054.6351277679478	2	528.3263549804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10902	3772	14672
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14677	37.521	NaN	9260.8	30	0	3932.7	0.106				-1	 	0	60	448.2885028121929	894.5624526911859	2	448.2894287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10903	3772	14672
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14678	37.523	NaN	11645	30	0	2040.9	0.036	+			51295	YSAVERNNL	9	77	533.2699317890766	1064.5253106449532	2	533.2719116210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YSAVERNNL_	ENSG00000092439|ENST00000646667|TRPM7	49.44154591367651	0.3095138337212152	6				NaN	NaN	0	NaN	10904	3772	14672
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14679	37.523	NaN	7854	30	0	1495.9	0.139				-1	 	0	72	492.29620241646364	982.5778518997273	2	492.29730224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10905	3772	14672
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14695	37.558	NaN	42483	30	0	6784.4	0.214	+			7043	CSSNNNIARIT	11	84	596.7902492046743	1191.5659454761485	2	596.7921752929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CSSNNNIARIT_	ENSG00000114026|ENST00000344629|OGG1;ENST00000432857.2_1_3:9792686-9793638:+|nuORF;nc|ENSG00000114026|O15527-2|OGG1;nc|ENSG00000114026|O15527-3|OGG1;nc|ENSG00000114026|O15527-4|OGG1;nc|ENSG00000114026|O15527-5|OGG1;nc|ENSG00000114026|O15527-6|OGG1;nc|ENSG00000114026|O15527-7|OGG1;nc|ENSG00000114026|O15527-8|OGG1	54.722347961057174	0.3705654281804646	6				NaN	NaN	0	NaN	10918	3775	14694
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14696	37.562	NaN	19219	30	0	6653	0.106			+	-1	EMLAKETLL	9	75	532.2904667401176	1062.5663805470351	2	532.2930908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_EM(Oxidation (M))LAKETLL_	REV__ENSG00000148468|ENST00000378116|FAM171A1	74.25504064058377	0.12238981753128622	6				NaN	NaN	0	NaN	10919	3775	14694
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14697	37.564	NaN	9312.6	30	0	1722	0.106				-1	VKPKVASMEEM	11	83	632.8179242933514	1263.6212956535028	2	632.81982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_VKPKVASM(Oxidation (M))EEM_	ENSG00000147099|ENST00000373573|HDAC8;ENST00000478743.1_1_X:71710853-71792680:-|nuORF;nc|ENSG00000147099|Q9BY41-5|HDAC8;nc|ENSG00000147099|Q9BY41-7|HDAC8;nc|ENSG00000147099|Q9BY41-8|HDAC8	37.81151784470057	0.5878881669006212	6				NaN	NaN	0	NaN	10920	3775	14694
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14698	37.566	NaN	8692.1	30	0	1371.4	0.106			+	37408	SLGGKAQVVL	10	75	486.29600628857986	970.5774596439597	2	486.7895812988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLGGKAQVVL_	REV__ENSG00000048707|ENST00000620676|VPS13D;REV__nc|ENSG00000048707|Q5THJ4-2|VPS13D;REV__VPS13D|p.K3964Nfs*34|1|0.09|ENSG00000048707|chr1:12403831-12403831|A/-|frameshift_variant	39.252832667884924	0.5560298534376815	6				NaN	NaN	0	NaN	10921	3775	14694
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14699	37.567	NaN	6857.2	30	0	1956.4	0.106				-1	 	0	62	477.801520683923	953.588488434646	2	477.80267333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10922	3775	14694
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14700	37.569	NaN	19691	30	0	10931	0.037			+	23582	LALSKLRRR	9	78	371.5838052531459	1111.7295863596378	3	371.58489990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LALSKLRRR_	REV__ENSG00000093183|ENST00000264454|SEC22C;REV__ENST00000456222.1_1_3:42605456-42610538:-|nuORF;REV__nc|ENSG00000093183|Q9BRL7-2|SEC22C;REV__nc|ENSG00000093183|Q9BRL7-3|SEC22C	30.317721548370564	0.5199124245378496	6				NaN	NaN	0	NaN	10923	3775	14694
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14701	37.57	NaN	6812.2	30	0	540.82	0.142	+			17031	HPVPQPLQSF	10	73	575.3037672432282	1148.5929815532563	2	575.3067016601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HPVPQPLQSF_	ENSG00000204103|ENST00000373313|MAFB;MAFB|p.D125N|1|0.29|ENSG00000204103|chr20:40688478-40688478|C/T|missense_variant	82.7504851949679	0.1731497355276012	6				NaN	NaN	0	NaN	10924	3775	14694
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14716	37.603	NaN	39529	30	0	7369	0.214			+	1450	AFAIWRML	8	85	504.2779059206637	1006.5412589081275	2	504.2795715332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AFAIWRML_	REV__ENSG00000109066|ENST00000335464|TMEM104;REV__TMEM104|p.F356Sfs*19|1|0.13|ENSG00000109066|chr17:74836259-74836259|T/-|frameshift_variant;REV__TMEM104|p.V362Sfs*13|1|0.42|ENSG00000109066|chr17:74836276-74836276|C/-|frameshift_variant	52.29916861842294	0.578018602984656	6				NaN	NaN	0	NaN	10936	3778	14715
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14717	37.607	NaN	16060	30	0	1222.9	0.106	+			21841	KRGRNIIKK	9	84	556.8722536998202	1111.7299544664404	2	556.8740844726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KRGRNIIKK_	NANOGNB|p.C151Vfs*21|1|0.43|ENSG00000205857|chr12:7770451-7770451|T/-|frameshift_variant	37.81151784470057	0.4459294069877048	6				NaN	NaN	0	NaN	10937	3778	14715
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14718	37.609	NaN	22571	30	0	8371.3	0.106	+			37748	SLTVSPIRV	9	77	486.29600628857986	970.5774596439597	2	486.2978210449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLTVSPIRV_	ENST00000262919.9_1_20:3627575-3627716:+|nuORF	39.252832667884924	0.4290233611298554	6				NaN	NaN	0	NaN	10938	3778	14715
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14719	37.611	NaN	26088	30	0	3181.7	0.106				-1	 	0	76	475.275746763232	948.536940593264	2	475.27655029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10939	3778	14715
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14720	37.613	NaN	14512	30	0	4268.4	0.106				-1	 	0	84	513.2855385668855	1024.556524200571	2	513.2870483398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10940	3778	14715
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14721	37.614	NaN	11041	30	0	1212.8	0.035	+			7635	DKKSRSSLK	9	85	524.8097102230563	1047.6048675129125	2	524.8118286132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DKKSRSSLK_	ENST00000361828.6_1_3:193413749-193413833:+|nuORF	38.753607047826485	0.4348790777924195	6				NaN	NaN	0	NaN	10941	3778	14715
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14722	37.615	NaN	24439	30	0	9306.4	0.142			+	31636	QMMLNRFSH	9	83	582.276350181006	1162.538147428812	2	582.277587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QMMLNRFSH_	REV__ENST00000367142.4_1_1:205693083-205719238:-|nuORF	87.75429964447693	0.0711966946989736	6				NaN	NaN	0	NaN	10942	3778	14715
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14738	37.65	NaN	16192	30	0	1724.7	0.214	+			17640	IEKEGEFTL	9	80	533.2748236260159	1064.5350943188316	2	533.27734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IEKEGEFTL_	ENSG00000169189|ENST00000361439|NSMCE1;ENST00000565070.5_1_16:27237776-27268891:-|nuORF;ENST00000569236.5_1_16:27236480-27252833:-|nuORF	80.45461616416974	0.09558281504443908	6				NaN	NaN	0	NaN	10955	3781	14737
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14739	37.654	NaN	9914	30	0	1728.3	0.106				-1	 	0	53	339.2142515162567	676.4139500993134	2	339.2153015136719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	10956	3781	14737
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14740	37.656	NaN	10109	30	0	1844.2	0.106			+	43293	TFLQLGAP	8	71	423.7401880992614	845.4658232653228	2	423.74127197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TFLQLGAP_	REV__ENST00000480738.1_1_13:99967048-100037586:+|nuORF	57.81127852772723	0.5234495074909924	6				NaN	NaN	0	NaN	10957	3781	14737
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14741	37.658	NaN	10585	30	0	1169.7	0.106			+	10573	EYHPFLVI	8	84	509.2721512768157	1016.5297496204314	2	509.2734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EYHPFLVI_	REV__ENSG00000175893|ENST00000380916|ZDHHC21	65.89745868150666	0.44339748671293633	6				NaN	NaN	0	NaN	10958	3781	14737
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14742	37.659	NaN	12622	30	0	1344.5	0.106			+	9918	EQSLRMGEM	9	84	548.7405254771963	1095.4664980211926	2	548.7427978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_EQSLRMGEM(Oxidation (M))_	REV__ENSG00000001631|ENST00000394505|KRIT1;REV__ENST00000475770.5_1_7:91830052-91864980:-|nuORF;REV__ENST00000486261.5_1_7:91830052-91864980:-|nuORF;REV__nc|ENSG00000001631|O00522-2|KRIT1;REV__nc|ENSG00000001631|O00522-3|KRIT1	76.7741389293348	0.11149722112137898	6				NaN	NaN	0	NaN	10959	3781	14737
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14743	37.661	NaN	6777.4	30	0	1170	0.035	+			12535	GEFSITYKP	9	81	521.2654076855389	1040.5162624378777	2	521.2670288085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GEFSITYKP_	ENSG00000115268|ENST00000592588|RPS15;ENST00000522454.1_1_5:164028010-164028223:-|nuORF;ENST00000586096.3_1_19:1440314-1440458:+|nuORF	42.86426827375447	0.38666266728046506	6				NaN	NaN	0	NaN	10960	3781	14737
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14744	37.662	NaN	10968	30	0	1376.3	0.141	+			10185	ETARALYSLG	10	89	540.7891177161622	1079.5636824991243	2	540.7922973632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ETARALYSLG_	ENSG00000144843|ENST00000357003|ADPRH;ENST00000471850.1_1_3:119298364-119306722:+|nuORF	70.8162118820467	0.27065172005956	6				NaN	NaN	0	NaN	10961	3781	14737
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14762	37.701	NaN	23783	30	0	2172.1	0.214			+	33904	RRRSGLQPL	9	92	541.8306898555256	1081.6468267778512	2	541.8328247070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RRRSGLQPL_	REV__ENST00000261721.8_1_15:83735740-83736061:-|nuORF	55.08391021199286	0.2545954270840753	6				NaN	NaN	0	NaN	10976	3784	14761
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14763	37.704	NaN	13283	30	0	1437.1	0.106	+			32901	RDRGLVRPGS	10	92	556.8177210081798	1111.6208890831595	2	556.81982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RDRGLVRPGS_	ENSG00000119596|ENST00000325680|YLPM1;nc|ENSG00000119596|P49750-1|YLPM1;nc|ENSG00000119596|P49750-3|YLPM1;YLPM1|p.F1761Lfs*40|1|0.31|ENSG00000119596|chr14:74811671-74811671|T/-|frameshift_variant	47.95952297671804	0.47580206326914537	6				NaN	NaN	0	NaN	10977	3784	14761
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14764	37.707	NaN	21710	30	0	3411.2	0.106	+			23240	KYIEGVSDF	9	85	529.2625975485929	1056.5106421639857	2	529.2642822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KYIEGVSDF_	ENSG00000197429|ENST00000396478|IPP;nc|ENSG00000197429|Q9Y573-2|IPP	101.25262130126117	0.03792372629710479	6				NaN	NaN	0	NaN	10978	3784	14761
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14765	37.708	NaN	11013	30	0	810.81	0.106	+			49574	VYDTVFKHF	9	84	578.2941347536689	1154.5737165741377	2	578.295654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VYDTVFKHF_	ENSG00000185404|ENST00000415673|SP140L;nc|ENSG00000185404|Q9H930-1|SP140L;nc|ENSG00000185404|Q9H930-2|SP140L;SP140L|p.F492Lfs*17|1|0.46|ENSG00000185404|chr2:230401414-230401414|T/-|frameshift_variant;SP140L|p.M88Nfs*3|1|0.34|ENSG00000185404|chr2:230357955-230357956|-/A|frameshift_variant	143.8867514904718	0.008656634767784652	6				NaN	NaN	0	NaN	10979	3784	14761
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14766	37.71	NaN	5120.3	30	0	845.99	0.106	+			2046	AKSLKQSVF	9	51	336.5344378546052	NaN	0	336.5343017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AKSLKQSVF_	MTBP|p.K383Sfs*12|1|0.11|ENSG00000172167|chr8:120470916-120470916|A/-|frameshift_variant	23.04248740728303	0.3589936788096251	6				NaN	NaN	0	NaN	10980	3784	14761
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14767	37.712	NaN	5589.6	30	0	552.05	0.037	+			9841	EPQHWPVQY	9	74	592.2788165298792	1182.5430801265584	2	592.2815551757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EPQHWPVQY_	ENSG00000177383|ENST00000317897|MAGEF1	102.7733458925114	0.03637199559902695	6				NaN	NaN	0	NaN	10981	3784	14761
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14768	37.713	NaN	5276.8	30	0	654.82	0.141			+	24742	LHSELVCAY	9	69	517.7501647088451	1033.48577648449	2	517.7522583007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LHSELVCAY_	REV__ENSG00000147481|ENST00000642720|SNTG1;REV__ENST00000524004.5_3_8:51571197-51621559:+|nuORF;REV__nc|ENSG00000147481|Q9NSN8-2|SNTG1	52.29916861842294	0.2778091507991977	6				NaN	NaN	0	NaN	10982	3784	14761
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14784	37.748	NaN	118390	30	0	15783	0.157			+	49951	VYVVDNRQ	8	78	496.76238786020417	991.5102227872084	2	496.7637939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYVVDNRQ_	REV__ENSG00000159495|ENST00000452443|TGM7;REV__TGM7|p.S214Y|1|0.37|ENSG00000159495|chr15:43287587-43287587|G/T|missense_variant	96.19043198914106	0.25873003980794995	6				NaN	NaN	0	NaN	10995	3787	14783
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14785	37.75	NaN	13436	30	0	1416.7	0.106			+	49047	VVIKCVACK	9	74	510.29055585115026	1018.5665587691005	2	510.2921447753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_VVIKCVAC(Carbamidomethyl (C))K_	REV__ENSG00000157680|ENST00000614521|DGKI;REV__nc|ENSG00000157680|O75912|DGKI	51.33545320467046	0.2872990594074956	6				NaN	NaN	0	NaN	10996	3787	14783
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14786	37.752	NaN	10008	30	0	1853.6	0.106	+			50338	WVDKDKGTFQ	10	74	612.3057495512451	1222.59694616929	2	612.30810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_WVDKDKGTFQ_	ENSG00000066336|ENST00000378538|SPI1;ENST00000533030.1_1_11:47376780-47400013:-|nuORF;nc|ENSG00000066336|P17947-2|SPI1	44.377184641726394	0.5088115166961078	6				NaN	NaN	0	NaN	10997	3787	14783
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14787	37.754	NaN	5309.4	30	0	711.85	0.106	+			5707	AVFEWHITK	9	71	565.8019067363214	1129.5892605394426	2	565.8037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVFEWHITK_	ENSG00000133835|ENST00000510025|HSD17B4;ENST00000442060.7_1_5:118862877-118877689:+|nuORF;ENST00000515235.6_1_5:118829562-118961685:+|nuORF;HSD17B4|p.L703Ifs*15|1|0.06|ENSG00000133835|chr5:119536530-119536531|-/GAAAAATA|frameshift_variant;nc|ENSG00000133835|P51659-2|HSD17B4;nc|ENSG00000133835|P51659-3|HSD17B4	61.76455937419982	0.19890525308472518	6				NaN	NaN	0	NaN	10998	3787	14783
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14788	37.756	NaN	5728.2	30	0	501.63	0.106				-1	CGGLVTVAHN	10	71	506.7505140076671	NaN	0	506.75054931640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))CGGLVTVAHN_	ENSG00000091136|ENST00000222399|LAMB1;LAMB1|p.A1440T|1|0.41|ENSG00000091136|chr7:107932248-107932248|C/T|missense_variant;LAMB1|p.T1709Lfs*22|3|0.29|ENSG00000091136|chr7:107924329-107924329|T/-|frameshift_variant	37.81151784470057	0.3760215235790741	6				NaN	NaN	0	NaN	10999	3787	14783
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14789	37.758	NaN	9236.4	30	0	1863.6	0.106				-1	 	0	64	444.7415344729533	887.4685160127066	2	444.7428894042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11000	3787	14783
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14790	37.76	NaN	5759.7	30	0	831.14	0.036			+	10525	EWDLRGISE	9	82	552.7680441225252	1103.5215353118504	2	552.7686767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EWDLRGISE_	REV__ENSG00000166762|ENST00000396879|CATSPER2;REV__nc|ENSG00000166762|Q96P56-2|CATSPER2	47.95952297671804	0.32689736945648856	6				NaN	NaN	0	NaN	11001	3787	14783
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14808	37.797	NaN	9770.2	30	0	1123.4	0.214	+			1518	AGAHKRVVIQ	10	76	539.8276220793589	1077.6406912255177	2	539.8294067382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AGAHKRVVIQ_	ENSG00000170537|ENST00000304381|TMC7;nc|ENSG00000170537|Q7Z402-2|TMC7	36.31764250033197	0.5830761606467809	6				NaN	NaN	0	NaN	11016	3790	14807
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14809	37.801	NaN	10447	30	0	1062.2	0.106	+			816	AEFVGVSHL	9	66	479.75209991012866	957.4896468870573	2	479.7530212402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEFVGVSHL_	ENSG00000141101|ENST00000268802|NOB1;ENST00000502915.1_1_4:139481866-139482694:+|nuORF	101.60071028292904	0.0375685401170269	6				NaN	NaN	0	NaN	11017	3790	14807
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14810	37.803	NaN	11142	30	0	1378.3	0.106			+	17523	IDLHKEAIE	9	82	534.2888928939111	1066.5632328546221	2	534.2899780273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IDLHKEAIE_	REV__ACTN2|p.F256Lfs*20|1|0.38|ENSG00000077522|chr1:236735702-236735702|T/-|frameshift_variant;REV__ENSG00000077522|ENST00000366578|ACTN2;REV__nc|ENSG00000077522|P35609-2|ACTN2	51.33545320467046	0.2872990594074956	6				NaN	NaN	0	NaN	11018	3790	14807
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14811	37.805	NaN	10468	30	0	4822	0.106			+	27930	MVCTSKLLVD	10	80	583.302372538981	1164.5901921447619	2	583.3038330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_MVC(Carbamidomethyl (C))TSKLLVD_	REV__MYO1G|p.L145M|1|0.35|ENSG00000136286|chr7:44975615-44975615|G/T|missense_variant	65.46538089061403	0.31613324008013116	6				NaN	NaN	0	NaN	11019	3790	14807
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14812	37.806	NaN	7070.4	30	0	776.78	0.106			+	21496	KNLDKLEIK	9	79	550.8354278145048	1099.6563026958095	2	550.837646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KNLDKLEIK_	REV__tr|U7T2Q1|U7T2Q1_FUSNUGeneralsecretionpathwayproteinDOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00785PE=3SV=1	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	11020	3790	14807
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14813	37.808	NaN	9723.1	30	0	1679.8	0.036			+	9516	EKWRGVSNK	9	81	552.3010108517022	1102.5874687702044	2	552.302978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EKWRGVSNK_	REV__ENSG00000115414|ENST00000354785|FN1;REV__FN1|p.L1714*|1|0.2|ENSG00000115414|chr2:215380832-215380832|G/-|frameshift_variant;REV__FN1|p.S1791Rfs*9|1|0.07|ENSG00000115414|chr2:215378239-215378239|A/-|frameshift_variant;REV__nc|ENSG00000115414|P02751-1|FN1;REV__nc|ENSG00000115414|P02751-10|FN1;REV__nc|ENSG00000115414|P02751-11|FN1;REV__nc|ENSG00000115414|P02751-12|FN1;REV__nc|ENSG00000115414|P02751-13|FN1;REV__nc|ENSG00000115414|P02751-14|FN1;REV__nc|ENSG00000115414|P02751-17|FN1;REV__nc|ENSG00000115414|P02751-3|FN1;REV__nc|ENSG00000115414|P02751-4|FN1;REV__nc|ENSG00000115414|P02751-5|FN1;REV__nc|ENSG00000115414|P02751-6|FN1;REV__nc|ENSG00000115414|P02751-7|FN1;REV__nc|ENSG00000115414|P02751-8|FN1;REV__nc|ENSG00000115414|P02751-9|FN1	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	11021	3790	14807
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14814	37.809	NaN	12794	30	0	1059.1	0.141				-1	EQKNEGCQV	9	78	546.2433127191425	1090.472072505085	2	546.245361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_EQKNEGC(Carbamidomethyl (C))QV_	ENSG00000125991|ENST00000348547|ERGIC3;ENST00000482338.5_1_20:34136370-34144126:+|nuORF;ENST00000489071.5_1_20:34135089-34136623:+|nuORF;nc|ENSG00000125991|Q9Y282-2|ERGIC3;nc|ENSG00000125991|Q9Y282-3|ERGIC3	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	11022	3790	14807
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14831	37.846	NaN	23557	30	0	3254.5	0.214	+			17001	HPTAFVVSY	9	90	510.7603460510215	1019.506139168843	2	510.760986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HPTAFVVSY_	ENSG00000168394|ENST00000354258|TAP1;nc|ENSG00000168394|Q03518-2|TAP1	71.29570347882199	0.13518600952103718	6				NaN	NaN	0	NaN	11036	3793	14830
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14832	37.849	NaN	17678	30	0	3080.4	0.106			+	23798	LCMLGRIHS	9	85	515.2701319202818	1028.5257109073634	2	515.27197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LCMLGRIHS_	REV__ENSG00000101871|ENST00000317552|MID1;REV__nc|ENSG00000101871|O15344-2|MID1	58.78195531508484	0.22376836668196862	6				NaN	NaN	0	NaN	11037	3793	14830
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14833	37.851	NaN	16858	30	0	8428	0.106	+			47081	VLIKGKRQT	9	67	348.2295372296859	1041.6667822892578	3	348.2306213378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VLIKGKRQT_	ENSG00000119397|ENST00000373855|CNTRL;nc|ENSG00000119397|Q7Z7A1-2|CNTRL;nc|ENSG00000119397|Q7Z7A1-3|CNTRL;nc|ENSG00000119397|Q7Z7A1-4|CNTRL;nc|ENSG00000119397|Q7Z7A1-5|CNTRL	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	11038	3793	14830
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14834	37.853	NaN	4772	30	0	621	0.106	+			46098	VDAVPRIV	8	59	434.7661198245438	NaN	0	434.7662353515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VDAVPRIV_	ENST00000476719.1_1_9:135601077-135753754:-|nuORF	44.116797842482775	1.7418937515398478	6				NaN	NaN	0	NaN	11039	3793	14830
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14835	37.855	NaN	4898.9	30	0	317.05	0.106				-1	 	0	70	467.76994866402833	933.5253443948567	2	467.7711486816406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11040	3793	14830
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14836	37.857	NaN	4781.6	30	0	846.72	0.037			+	42408	TAKGRAAAESR	11	80	373.20987774270935	NaN	0	373.2099609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TAKGRAAAESR_	REV__MEOX2|p.P118Qfs*98|1|0.52|ENSG00000106511|chr7:15686050-15686050|G/-|frameshift_variant	44.639436926238396	0.3538202969592268	6				NaN	NaN	0	NaN	11041	3793	14830
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14837	37.857	NaN	6630.7	30	0	741.59	0.141	+			10332	ETSRVVFQL	9	77	539.7969563770649	1077.5793598209298	2	539.7990112304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ETSRVVFQL_	ENST00000584516.5_1_17:73587014-73591049:+|nuORF	60.11826168202944	0.21262886028301267	6				NaN	NaN	0	NaN	11042	3793	14830
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14855	37.897	NaN	142250	30	0	21725	0.214				-1	 	0	85	447.77263659699446	893.5307202607889	2	447.7736511230469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11057	3796	14854
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14856	37.9	NaN	26353	30	0	2480.2	0.106				-1	 	0	75	480.29102961886247	958.567506304525	2	480.2918395996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11058	3796	14854
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14857	37.903	NaN	21558	30	0	8872.8	0.106				-1	 	0	75	506.3117758723052	1010.6089988114104	2	506.313232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11059	3796	14854
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14858	37.904	NaN	14559	30	0	4228.1	0.106				-1	YYTEKCVM	8	81	526.7238697629859	1051.4331865927718	2	526.7254028320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_YYTEKCVM(Oxidation (M))_	DGKD|p.G855Vfs*48|1|0.29|ENSG00000077044|chr2:233457306-233457306|G/-|frameshift_variant;ENSG00000077044|ENST00000264057|DGKD;ENST00000490764.5_1_2:234327938-234366271:+|nuORF;nc|ENSG00000077044|Q16760-2|DGKD	79.9392285194092	0.32408006123154964	6				NaN	NaN	0	NaN	11060	3796	14854
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14859	37.906	NaN	6178.8	30	0	813.92	0.106	+			12644	GEIKGFTGI	9	69	461.2543872697511	920.4942216063022	2	461.2553405761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GEIKGFTGI_	ENSG00000138801|ENST00000265174|PAPSS1;ENSG00000198682|ENST00000456849|PAPSS2;nc|ENSG00000198682|O95340|PAPSS2	82.7504851949679	0.08565546331141553	6				NaN	NaN	0	NaN	11061	3796	14854
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14860	37.908	NaN	10822	30	0	639.06	0.036			+	8642	EDKKSVEDL	9	84	531.7698976095492	NaN	0	531.7694091796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EDKKSVEDL_	REV__tr|U7SFT1|U7SFT1_FUSNUDNA3'-5'helicaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02223PE=3SV=1	101.60071028292904	0.0182107634719595	6				NaN	NaN	0	NaN	11062	3796	14854
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14861	37.909	NaN	4848.5	30	0	408.52	0.139	+			17913	IGILPNHAP	9	67	466.2718741816912	930.5291954301824	2	466.27294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IGILPNHAP_	tr|U7SMQ7|U7SMQ7_FUSNUATPsynthaseepsilonchainOS=FusobacteriumnucleatumCTI-5OX=1316586GN=atpCPE=3SV=1	60.29395666154354	0.21116425950210296	6				NaN	NaN	0	NaN	11063	3796	14854
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14874	37.937	NaN	20009	30	0	3860.8	0.214				-1	 	0	68	482.27794703632236	962.5413411394447	2	482.27886962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11073	3799	14873
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14875	37.941	NaN	13130	30	0	2937.1	0.106				-1	 	0	72	454.2647262489198	906.5148995646397	2	454.2658996582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11074	3799	14873
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14876	37.943	NaN	8682.8	30	0	3486	0.106			+	48958	VVFYIFTL	8	77	501.290363734785	1000.56617453637	2	501.29229736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVFYIFTL_	REV__ENSG00000180616|ENST00000357585|SSTR2;REV__nc|ENSG00000180616|P30874-2|SSTR2	47.91560031466742	0.6071945918984287	6				NaN	NaN	0	NaN	11075	3799	14873
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14877	37.945	NaN	11494	30	0	2060	0.106			+	17557	IDVWGELTI	9	81	523.2830523755662	NaN	0	523.2837524414062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IDVWGELTI_	REV__CACNA1G|p.E1556Rfs*15|1|0.23|ENSG00000006283|chr17:50607978-50607978|G/-|frameshift_variant;REV__CACNA1G|p.E2317Rfs*47|1|0.22|ENSG00000006283|chr17:50626559-50626559|C/-|frameshift_variant;REV__CACNA1G|p.G548Wfs*31|1|0.08|ENSG00000006283|chr17:50576035-50576036|-/C|frameshift_variant;REV__CACNA1G|p.P2298Afs*13|1|0.4|ENSG00000006283|chr17:50626502-50626503|-/G|frameshift_variant;REV__CACNA1G|p.R516Gfs*48|1|0.26|ENSG00000006283|chr17:50575943-50575943|C/-|frameshift_variant;REV__CACNA1H|p.C2191Afs*26|4|0.28|ENSG00000196557|chr16:1220496-1220496|C/-|frameshift_variant;REV__CACNA1H|p.F1444Lfs*51|1|0.41|ENSG00000196557|chr16:1211272-1211272|T/-|frameshift_variant;REV__CACNA1H|p.G2053Afs*135|1|0.13|ENSG00000196557|chr16:1220085-1220085|G/-|frameshift_variant;REV__ENSG00000006283|ENST00000359106|CACNA1G;REV__ENSG00000196557|ENST00000348261|CACNA1H;REV__nc|ENSG00000006283|O43497-10|CACNA1G;REV__nc|ENSG00000006283|O43497-11|CACNA1G;REV__nc|ENSG00000006283|O43497-12|CACNA1G;REV__nc|ENSG00000006283|O43497-13|CACNA1G;REV__nc|ENSG00000006283|O43497-15|CACNA1G;REV__nc|ENSG00000006283|O43497-16|CACNA1G;REV__nc|ENSG00000006283|O43497-17|CACNA1G;REV__nc|ENSG00000006283|O43497-18|CACNA1G;REV__nc|ENSG00000006283|O43497-19|CACNA1G;REV__nc|ENSG00000006283|O43497-2|CACNA1G;REV__nc|ENSG00000006283|O43497-20|CACNA1G;REV__nc|ENSG00000006283|O43497-21|CACNA1G;REV__nc|ENSG00000006283|O43497-22|CACNA1G;REV__nc|ENSG00000006283|O43497-23|CACNA1G;REV__nc|ENSG00000006283|O43497-24|CACNA1G;REV__nc|ENSG00000006283|O43497-25|CACNA1G;REV__nc|ENSG00000006283|O43497-26|CACNA1G;REV__nc|ENSG00000006283|O43497-27|CACNA1G;REV__nc|ENSG00000006283|O43497-28|CACNA1G;REV__nc|ENSG00000006283|O43497-29|CACNA1G;REV__nc|ENSG00000006283|O43497-3|CACNA1G;REV__nc|ENSG00000006283|O43497-30|CACNA1G;REV__nc|ENSG00000006283|O43497-31|CACNA1G;REV__nc|ENSG00000006283|O43497-32|CACNA1G;REV__nc|ENSG00000006283|O43497-33|CACNA1G;REV__nc|ENSG00000006283|O43497-34|CACNA1G;REV__nc|ENSG00000006283|O43497-35|CACNA1G;REV__nc|ENSG00000006283|O43497-36|CACNA1G;REV__nc|ENSG00000006283|O43497-4|CACNA1G;REV__nc|ENSG00000006283|O43497-5|CACNA1G;REV__nc|ENSG00000006283|O43497-6|CACNA1G;REV__nc|ENSG00000006283|O43497-7|CACNA1G;REV__nc|ENSG00000006283|O43497-8|CACNA1G;REV__nc|ENSG00000006283|O43497-9|CACNA1G;REV__nc|ENSG00000196557|O95180-2|CACNA1H	79.45101966838831	0.07326487554222888	6				NaN	NaN	0	NaN	11076	3799	14873
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14878	37.947	NaN	5855.2	30	0	424.59	0.106	+			18342	IQDSNQYQF	9	73	571.7579132491941	1141.501273565188	2	571.7593994140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IQDSNQYQF_	ENSG00000128833|ENST00000261839|MYO5C;ENST00000558902.5_1_15:52529812-52548856:-|nuORF;ENST00000560809.5_1_15:52532054-52548856:-|nuORF;MYO5C|p.E1050Sfs*8|1|0.32|ENSG00000128833|chr15:52229192-52229192|C/-|frameshift_variant;MYO5C|p.L1151Wfs*19|1|0.17|ENSG00000128833|chr15:52223719-52223719|A/-|frameshift_variant;MYO5C|p.L933Hfs*33|1|0.04|ENSG00000128833|chr15:52237552-52237553|-/T|frameshift_variant;MYO5C|p.L933Sfs*35|1|0.04|ENSG00000128833|chr15:52237553-52237554|-/AAGTGGA|frameshift_variant	96.0336014099291	0.047854655524928534	6				NaN	NaN	0	NaN	11077	3799	14873
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14879	37.949	NaN	9798.2	30	0	1623.3	0.106			+	26484	LTLQSNQTF	9	88	526.2742594065037	1050.5339658798073	2	526.2758178710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LTLQSNQTF_	REV__ENSG00000197050|ENST00000337995|ZNF420;REV__nc|ENSG00000197050|Q8TAQ5-2|ZNF420;REV__ZNF420|p.K361Nfs*214|1|0.5|ENSG00000197050|chr19:37128070-37128070|A/-|frameshift_variant	42.86426827375447	0.38666266728046506	6				NaN	NaN	0	NaN	11078	3799	14873
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14880	37.95	NaN	4550.1	30	0	954.05	0.033	+			25770	LSALGLRF	8	66	438.7675959158908	875.5206388985816	2	438.7688903808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSALGLRF_	ENST00000422972.1_1_22:29214364-29218101:+|nuORF;ENST00000451486.5_1_22:29197956-29218101:+|nuORF;ENST00000458080.1_1_22:29196681-29218101:+|nuORF	57.81127852772723	0.5234495074909924	6				NaN	NaN	0	NaN	11079	3799	14873
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14895	37.982	NaN	31631	30	0	4846.9	0.214			+	31671	QNHIREPH	8	88	515.76221975707	1029.50988658094	2	515.7645263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QNHIREPH_	REV__ENSG00000105855|ENST00000222573|ITGB8;REV__ENST00000477859.1_1_7:20406589-20418951:+|nuORF;REV__nc|ENSG00000105855|P26012-2|ITGB8	57.81127852772723	0.5234495074909924	6				NaN	NaN	0	NaN	11091	3802	14894
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14896	37.985	NaN	17501	30	0	3107.2	0.106			+	51281	YRTVAIAD	8	78	454.74536049159445	907.4761680499889	2	454.7454833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YRTVAIAD_	REV__ENSG00000163214|ENST00000457308|DHX57	74.25504064058377	0.37144338840759816	6				NaN	NaN	0	NaN	11092	3802	14894
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14897	37.987	NaN	10315	30	0	605.45	0.106	+			18948	IVPKEPPPE	9	76	503.2830658004166	1004.5515786676332	2	503.2847595214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IVPKEPPPE_	ENSG00000099995|ENST00000215793|SF3A1;SF3A1|p.R642Afs*5|1|0.33|ENSG00000099995|chr22:30337717-30337717|G/-|frameshift_variant	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	11093	3802	14894
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14898	37.989	NaN	8369.3	30	0	568.19	0.106	+			47899	VSLKTFVLK	9	82	517.832793472182	1033.6510340111638	2	517.8346557617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSLKTFVLK_	ENSG00000146054|ENST00000274773|TRIM7;nc|ENSG00000146054|Q9C029-3|TRIM7;nc|ENSG00000146054|Q9C029-4|TRIM7	23.52269567125451	0.5834155526130771	6				NaN	NaN	0	NaN	11094	3802	14894
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14899	37.991	NaN	5096.7	30	0	302.71	0.106	+			1127	AELQPYMLK	9	79	546.7899675683154	1091.5653822034308	2	546.7922973632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AELQPYMLK_	ENSG00000272514|ENST00000369562|CFAP206;ENST00000296885.7_1_6:88117749-88144792:+|nuORF;ENST00000489338.6_1_6:88125312-88173965:+|nuORF	52.936696900407355	0.27249468807391813	6				NaN	NaN	0	NaN	11095	3802	14894
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14900	37.993	NaN	3992.5	30	0	575.47	0.035			+	1458	AFFNALQLG	9	65	490.7639157766832	979.5132786201664	2	491.26654052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AFFNALQLG_	REV__ENSG00000100739|ENST00000216629|BDKRB1	33.51558372728122	0.4900267029546261	6				NaN	NaN	0	NaN	11096	3802	14894
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14901	37.993	NaN	3965.6	30	0	442.95	0.139	+			17412	IASGVTWIV	9	66	473.2742188005664	944.5338846679329	2	473.2757263183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IASGVTWIV_	tr|U7T418|U7T418_FUSNUIon-translocatingoxidoreductasecomplexsubunitAOS=FusobacteriumnucleatumCTI-5OX=1316586GN=rnfAPE=3SV=1	30.503639358989545	0.5181749237905803	6				NaN	NaN	0	NaN	11097	3802	14894
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14919	38.033	NaN	82514	30	0	12686	0.2	+			42953	TEKAAANKTI	10	94	523.7960806423357	1045.5776083514713	2	523.7974853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TEKAAANKTI_	ENST00000592005.5_1_18:44497642-44497873:+|nuORF	65.15724298150197	0.31893571707528906	6				NaN	NaN	0	NaN	11112	3805	14918
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14920	38.036	NaN	202900	30	0	25650	0.106	+			49559	VYDQQREVY	9	97	600.2882534851121	1198.5619540370242	2	600.290771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYDQQREVY_	CEP55|p.D247Ifs*9|1|0.25|ENSG00000138180|chr10:93516987-93516987|A/-|frameshift_variant;ENSG00000138180|ENST00000371485|CEP55;nc|ENSG00000138180|Q53EZ4-2|CEP55	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	11113	3805	14918
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14921	38.038	NaN	50783	30	0	5061.8	0.106			+	1574	AGIALHSLSTV	11	98	534.8064782724568	1067.5984036117136	2	534.8082275390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AGIALHSLSTV_	REV__ENSG00000187122|ENST00000266058|SLIT1;REV__SLIT1|p.D1462Tfs*42|1|0.21|ENSG00000187122|chr10:97001333-97001333|C/-|frameshift_variant	40.77816245573522	0.5472954108598816	6				NaN	NaN	0	NaN	11114	3805	14918
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14922	38.04	NaN	10216	30	0	1911.5	0.106	+			22454	KTLFFGLCK	9	77	557.3099244336736	1112.605295934147	2	557.310791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_KTLFFGLC(Carbamidomethyl (C))K_	ENST00000298139.5_1_8:30891382-30915948:+|nuORF	98.58198989935565	0.04066992115528678	6				NaN	NaN	0	NaN	11115	3805	14918
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14923	38.042	NaN	7655	30	0	725.13	0.106	+			47089	VLKRPRHV	8	75	502.8272550493001	1003.6399571654002	2	502.82891845703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VLKRPRHV_	ENSG00000165792|ENST00000339374|METTL17;ENST00000554849.1_1_14:21464355-21465046:+|nuORF;ENST00000555640.6_1_14:21464355-21465039:+|nuORF;nc|ENSG00000165792|Q9H7H0-2|METTL17;nc|ENSG00000165792|Q9H7H0-3|METTL17	40.5726180659479	0.6527593143185008	6				NaN	NaN	0	NaN	11116	3805	14918
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14924	38.043	NaN	8818.8	30	0	2097.6	0.106	+			470	AAVPRAAFL	9	62	458.2731096624064	914.5316663916128	2	458.27423095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AAVPRAAFL_	ENSG00000089248|ENST00000261735|ERP29;ENST00000553161.1_1_12:112451251-112452397:+|nuORF;nc|ENSG00000089248|P30040-2|ERP29	65.80317337860623	0.1652391959156183	6				NaN	NaN	0	NaN	11117	3805	14918
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14925	38.045	NaN	13474	30	0	2155.8	0.035	+			49947	VYVRGSRR	8	84	496.79038244358696	991.566211953974	2	496.792236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VYVRGSRR_	ENSG00000163872|ENST00000305135|YEATS2;YEATS2|p.T1011Pfs*25|1|0.46|ENSG00000163872|chr3:183790909-183790909|C/-|frameshift_variant	47.657333605630114	0.6087971902037268	6				NaN	NaN	0	NaN	11118	3805	14918
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14943	38.081	NaN	21104	30	0	5531	0.214			+	16611	HGRVHPGAGP	10	77	492.75953089693405	983.5045088606681	2	492.76092529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HGRVHPGAGP_	REV__ENST00000270328.8_1_19:8670242-8670626:-|nuORF	42.86426827375447	0.522752283233888	6				NaN	NaN	0	NaN	11133	3808	14942
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14944	38.084	NaN	6741.5	30	0	1247.7	0.106			+	7751	DNKLSTDNPF	10	77	575.7725933434804	1149.5306337537606	2	575.7742919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DNKLSTDNPF_	REV__ENSG00000198363|ENST00000379454|ASPH;REV__nc|ENSG00000198363|Q12797-10|ASPH	37.50817390946774	0.5721060100277453	6				NaN	NaN	0	NaN	11134	3808	14942
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14945	38.086	NaN	9616.8	30	0	1008	0.106	+			37941	SPEGAVGRSL	10	65	486.75963743068525	971.5047219281705	2	486.7610168457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SPEGAVGRSL_	ENSG00000105612|ENST00000222219|DNASE2;nc|ENSG00000105612|O00115-2|DNASE2	68.84614121027924	0.2867470276772903	6				NaN	NaN	0	NaN	11135	3808	14942
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14946	38.088	NaN	10540	30	0	884.78	0.106				-1	 	0	78	592.3599430339176	1182.705333134635	2	592.3615112304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11136	3808	14942
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14947	38.09	NaN	4946.4	30	0	523.17	0.106	+			43432	TGLAIQYAL	9	70	475.2703987808586	948.5262446285172	2	475.271728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TGLAIQYAL_	ENSG00000132561|ENST00000254898|MATN2;nc|ENSG00000132561|O00339-2|MATN2;nc|ENSG00000132561|O00339-3|MATN2	44.116797842482775	0.37197099687881774	6				NaN	NaN	0	NaN	11137	3808	14942
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14948	38.092	NaN	6456.5	30	0	1950.3	0.106				-1	ESFSVMYTPF	10	46	408.514038303451	1222.520285510553	3	408.5161437988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_ESFSVM(Oxidation (M))YTPF_	ENSG00000144962|ENST00000351008|SPATA16;SPATA16|p.T413Hfs*5|1|0.44|ENSG00000144962|chr3:172924309-172924309|T/-|frameshift_variant	20.030474535948922	0.7146664069068879	6				NaN	NaN	0	NaN	11138	3808	14942
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14949	38.094	NaN	2754.9	30	0	348.35	0.034			+	10170	ESVYRSTL	8	60	477.74906743169134	953.4835819301827	2	477.75164794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ESVYRSTL_	REV__ENST00000401088.8_1_1:16722851-16723172:+|nuORF	39.252832667884924	0.6609488554722044	6				NaN	NaN	0	NaN	11139	3808	14942
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14962	38.12	NaN	74815	30	0	7850.6	0.214				-1	 	0	99	521.3045395877937	1040.5945262423872	2	521.3063354492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11149	3811	14961
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14963	38.124	NaN	6666.8	30	0	601.68	0.106				-1	 	0	64	444.77230024560816	887.5300475580163	2	444.7733459472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11150	3811	14961
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14964	38.126	NaN	5737.9	30	0	1193.9	0.106	+			3020	ASFDKAKLK	9	55	336.5344378546052	NaN	0	336.5342102050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASFDKAKLK_	ENSG00000034510|ENST00000233143|TMSB10	23.04248740728303	0.3589936788096251	6				NaN	NaN	0	NaN	11151	3811	14961
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14965	38.128	NaN	8347.4	30	0	2937	0.106	+			12955	GESVKFQL	8	63	454.247520056926	NaN	0	454.2475280761719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GESVKFQL_	ENSG00000009307|ENST00000358528|CSDE1;ENST00000483030.1_1_1:115263111-115268953:-|nuORF;nc|ENSG00000009307|O75534-2|CSDE1;nc|ENSG00000009307|O75534-3|CSDE1;nc|ENSG00000009307|O75534-4|CSDE1	74.25504064058377	1.7418937515398478	6				NaN	NaN	0	NaN	11152	3811	14961
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14966	38.129	NaN	7935.4	30	0	521.72	0.106	+			1090	AELEELTPL	9	74	507.7702251663467	1013.5258973994934	2	507.7715148925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AELEELTPL_	nc|ENSG00000008517|P24001-7|IL32	47.91560031466742	0.327412564698279	6				NaN	NaN	0	NaN	11153	3811	14961
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14967	38.131	NaN	10150	30	0	2406.2	0.106	+			14455	GTAYGFFGK	9	74	474.23351402992427	946.4524751266486	2	474.234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTAYGFFGK_	ENST00000580048.1_1_18:72264114-72264453:-|nuORF	101.60071028292904	0.0375685401170269	6				NaN	NaN	0	NaN	11154	3811	14961
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14968	38.133	NaN	5812.2	30	0	1720.5	0.033				-1	 	0	65	432.74350229619535	863.4724516591907	2	432.7447509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11155	3811	14961
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14983	38.163	NaN	26041	30	0	3830.3	0.214				-1	 	0	73	448.7516844467248	895.4888159602497	2	448.7528381347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11167	3814	14982
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14984	38.167	NaN	15522	30	0	2071	0.106	+			25487	LPSEIEVKY	9	90	539.2935986509732	1076.5726443687463	2	539.2952880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LPSEIEVKY_	ANAPC7|p.K150Nfs*22|1|0.27|ENSG00000196510|chr12:110395161-110395161|T/-|frameshift_variant;ENSG00000196510|ENST00000455511|ANAPC7;ENST00000464697.1_1_12:110825679-110841468:-|nuORF;ENST00000550231.1_1_12:110825542-110834223:-|nuORF;nc|ENSG00000196510|Q9UJX3-2|ANAPC7	110.11987700582712	0.028875675806141952	6				NaN	NaN	0	NaN	11168	3814	14982
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14985	38.169	NaN	9110.2	30	0	757.61	0.106	+			22979	KVRSRLKQ	8	90	507.83004632280483	1013.6455397124097	2	507.8316650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KVRSRLKQ_	ENSG00000048052|ENST00000686413|HDAC9;ENSG00000108840|ENST00000682912|HDAC5;HDAC5|p.E566Gfs*15|1|0.29|ENSG00000108840|chr17:44087599-44087600|-/C|frameshift_variant;HDAC5|p.I932Hfs*24|1|0.42|ENSG00000108840|chr17:44080432-44080433|-/G|frameshift_variant;HDAC5|p.I932Lfs*14|3|0.32|ENSG00000108840|chr17:44080433-44080433|G/-|frameshift_variant;HDAC9|p.D553Mfs*46|1|0.4|ENSG00000048052|chr7:18666406-18666412|CAGTGGA/-|frameshift_variant;nc|ENSG00000048052|Q9UKV0-10|HDAC9;nc|ENSG00000048052|Q9UKV0-2|HDAC9;nc|ENSG00000048052|Q9UKV0-3|HDAC9;nc|ENSG00000048052|Q9UKV0-4|HDAC9;nc|ENSG00000048052|Q9UKV0-5|HDAC9;nc|ENSG00000048052|Q9UKV0|HDAC9;nc|ENSG00000108840|Q9UQL6-2|HDAC5;nc|ENSG00000108840|Q9UQL6-3|HDAC5	49.44154591367651	0.597725784090933	6				NaN	NaN	0	NaN	11169	3814	14982
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14986	38.171	NaN	13374	30	0	1273.8	0.106			+	9696	EMEEKLIMK	9	82	591.7912828458744	1181.5680127585488	2	591.7931518554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Oxidation (M)	_EM(Oxidation (M))EEKLIM(Oxidation (M))K_	REV__DMTN|p.R327Gfs*22|1|0.42|ENSG00000158856|chr8:22080821-22080821|G/-|frameshift_variant;REV__ENSG00000158856|ENST00000358242|DMTN;REV__nc|ENSG00000158856|Q08495-2|DMTN;REV__nc|ENSG00000158856|Q08495-3|DMTN;REV__nc|ENSG00000158856|Q08495-4|DMTN	90.36981228632155	0.0638227155548745	6				NaN	NaN	0	NaN	11170	3814	14982
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14987	38.172	NaN	10442	30	0	1202.3	0.106			+	10345	ETTQPNIRH	9	80	548.2804686912679	1094.5463844493356	2	548.2828979492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ETTQPNIRH_	REV__ENSG00000138231|ENST00000260803|DBR1;REV__nc|ENSG00000138231|Q9UK59-2|DBR1	56.72105179125745	0.24094814563026265	6				NaN	NaN	0	NaN	11171	3814	14982
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14988	38.174	NaN	8932.7	30	0	789.59	0.106			+	23427	LACLKRPL	8	65	485.79851673445575	969.5824805357115	2	485.7999572753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_LAC(Carbamidomethyl (C))LKRPL_	REV__ENST00000361887.5_2_X:152157706-152158048:-|nuORF	83.28718786952967	0.2977916691876266	6				NaN	NaN	0	NaN	11172	3814	14982
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	14989	38.176	NaN	4972	30	0	543.95	0.037	+			11818	FSVAETLHSM	10	73	561.2663656614941	1120.518178389788	2	561.2675170898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FSVAETLHSM_	ENSG00000120008|ENST00000263461|WDR11	34.172542307311794	0.6007644933930345	6				NaN	NaN	0	NaN	11173	3814	14982
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15006	38.211	NaN	7136.9	30	0	1043.9	0.214				-1	 	0	66	487.76710609107766	973.5196592489553	2	487.7685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11187	3817	15005
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15007	38.215	NaN	7478.9	30	0	470.72	0.106	+			38556	SSFELIVQK	9	77	525.7933720558491	1049.572191178498	2	525.7948608398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSFELIVQK_	ENSG00000108424|ENST00000290158|KPNB1;nc|ENSG00000108424|Q14974-2|KPNB1	85.16082228582465	0.07850854922700509	6				NaN	NaN	0	NaN	11188	3817	15005
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15008	38.217	NaN	5800.4	30	0	622.02	0.106			+	7401	DEGNITKRK	9	78	530.7920546582868	1059.5695563833735	2	530.79443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DEGNITKRK_	REV__ENSG00000120837|ENST00000240055|NFYB	59.93077597824379	0.21419174904018318	6				NaN	NaN	0	NaN	11189	3817	15005
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15009	38.219	NaN	6055.7	30	0	867.73	0.106			+	47489	VQGKTWGPL	9	75	493.27733056402946	984.5401081948589	2	493.2787170410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VQGKTWGPL_	REV__ENSG00000163521|ENST00000295759|GLB1L;REV__nc|ENSG00000163521|Q6UWU2-2|GLB1L	53.351449002276354	0.2690372970092375	6				NaN	NaN	0	NaN	11190	3817	15005
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15010	38.22	NaN	6599.2	30	0	1279.9	0.106	+			19693	KDRLHLKEP	9	77	568.3332880729142	1134.6520232126284	2	568.335205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KDRLHLKEP_	ENSG00000054598|ENST00000645831|FOXC1	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	11191	3817	15005
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15011	38.222	NaN	5094.4	30	0	876.16	0.037				-1	CLGAALLLLCA	11	69	373.20987774270935	NaN	0	373.209716796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_CLGAALLLLC(Carbamidomethyl (C))A_	ENSG00000180767|ENST00000319340|CHST13;nc|ENSG00000180767|Q8NET6-2|CHST13	33.921630207806714	0.41424167740351664	6				NaN	NaN	0	NaN	11192	3817	15005
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15012	38.223	NaN	4043	30	0	880.82	0.14	+			46155	VDSCIRSLQ	9	64	510.7603460510215	1019.506139168843	2	512.26611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VDSCIRSLQ_	CTNND2|p.D443Tfs*113|1|0.35|ENSG00000169862|chr5:11364741-11364741|C/-|frameshift_variant;CTNND2|p.T336Pfs*14|1|0.43|ENSG00000169862|chr5:11384837-11384837|G/-|frameshift_variant;ENSG00000169862|ENST00000304623|CTNND2;nc|ENSG00000169862|Q9UQB3-2|CTNND2	32.81241826257853	0.4965981579233955	6				NaN	NaN	0	NaN	11193	3817	15005
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15029	38.26	NaN	22477	30	0	4737.3	0.215	+			38245	SQMSRMYTI	9	86	558.7625399907871	1115.5105270483741	2	558.7645874023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SQMSRMYTI_	ENSG00000142327|ENST00000270357|RNPEPL1	84.9155231211612	0.07920012719736333	6				NaN	NaN	0	NaN	11207	3820	15028
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15030	38.263	NaN	12415	30	0	2340.3	0.106			+	27363	MIVLFALPGG	10	78	509.2932615649532	1016.5719701967064	2	509.2950134277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MIVLFALPGG_	REV__ABCC5|p.L1090Cfs*26|1|0.47|ENSG00000114770|chr3:183947469-183947469|A/-|frameshift_variant;REV__ABCC5|p.L1090Vfs*62|2|0.19|ENSG00000114770|chr3:183947469-183947470|AA/-|frameshift_variant;REV__ENSG00000114770|ENST00000334444|ABCC5;REV__ENST00000437205.5_1_3:183639090-183689734:-|nuORF;REV__nc|ENSG00000114770|O15440-5|ABCC5	65.89745868150666	0.31220354485832413	6				NaN	NaN	0	NaN	11208	3820	15028
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15031	38.265	NaN	8459.8	30	0	636.05	0.106			+	6642	AYVGAGGLLF	10	79	484.2662805830125	966.518008232825	2	484.26751708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AYVGAGGLLF_	REV__ENSG00000147036|ENST00000378619|LANCL3;REV__nc|ENSG00000147036|Q6ZV70-2|LANCL3	44.53106598305862	0.5073935772121767	6				NaN	NaN	0	NaN	11209	3820	15028
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15032	38.267	NaN	6616	30	0	594.53	0.106				-1	 	0	64	447.77263659699446	893.5307202607889	2	447.77386474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11210	3820	15028
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15033	38.269	NaN	6201.5	30	0	399.72	0.106	+			3254	ASLGGFLAQK	10	79	496.28187942246376	NaN	0	496.2821044921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ASLGGFLAQK_	ENSG00000090487|ENST00000204566|SPG21;nc|ENSG00000090487|Q9NZD8-2|SPG21;SPG21|p.I163*|1|0.31|ENSG00000090487|chr15:64970188-64970188|T/-|frameshift_variant;SPG21|p.I163Nfs*17|1|0.26|ENSG00000090487|chr15:64970187-64970188|-/T|frameshift_variant	80.45461616416974	0.09722466730825292	6				NaN	NaN	0	NaN	11211	3820	15028
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15034	38.271	NaN	4746.8	30	0	356.76	0.035	+			51125	YNAYGLITP	9	77	506.2596120198395	1010.504671106479	2	506.2626037597656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YNAYGLITP_	ENSG00000115548|ENST00000312912|KDM3A;ENST00000441719.5_1_2:86711112-86716803:+|nuORF	53.351449002276354	0.2690372970092375	6				NaN	NaN	0	NaN	11212	3820	15028
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15035	38.271	NaN	7065.3	30	0	647.49	0.14	+			35795	SEAITFQKL	9	74	518.7854538788773	1035.5563548245545	2	518.7877197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SEAITFQKL_	ENSG00000162909|ENST00000295006|CAPN2;ENST00000483579.1_1_1:223934831-223936953:+|nuORF;nc|ENSG00000162909|P17655-2|CAPN2	98.58198989935565	0.04066992115528678	6				NaN	NaN	0	NaN	11213	3820	15028
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15053	38.311	NaN	13461	30	0	1590.5	0.214			+	46607	VFSSEKNGSF	10	84	551.2658427361785	1100.5171325391568	2	551.26806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VFSSEKNGSF_	REV__tr|U7STP1|U7STP1_FUSNUP-typeCa(2+)transporterOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01417PE=4SV=1	87.75429964447693	0.1439309699732727	6				NaN	NaN	0	NaN	11228	3823	15052
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15054	38.314	NaN	36899	30	0	5631.9	0.106	+			26093	LSNADKHTLS	10	90	543.2832782781028	1084.5520036230055	2	543.2852172851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSNADKHTLS_	ENST00000373606.7_1_20:35945124-35945295:+|nuORF	54.776311868738084	0.41334902933431344	6				NaN	NaN	0	NaN	11229	3823	15052
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15055	38.316	NaN	13036	30	0	1820.1	0.106	+			38592	SSGFIFDLQ	9	75	507.250650546248	1012.486748159296	2	507.2521057128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSGFIFDLQ_	ENSG00000123352|ENST00000552918|SPATS2	51.19269402634007	0.2889735674168909	6				NaN	NaN	0	NaN	11230	3823	15052
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15056	38.318	NaN	6249.7	30	0	920.25	0.106			+	-1	MFRNIKEA	8	75	512.767272480875	1023.5199920285501	2	512.768798828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_M(Oxidation (M))FRNIKEA_	REV__CON__Q3SZH5	76.7741389293348	0.3504530765139327	6				NaN	NaN	0	NaN	11231	3823	15052
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15057	38.32	NaN	13821	30	0	1764.5	0.106			+	46605	VFSKQLHTN	9	85	537.2911003901278	1072.5676478470555	2	537.2930908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VFSKQLHTN_	REV__BLM|p.G1220Pfs*25|1|0.09|ENSG00000197299|chr15:90804264-90804265|-/ACCTTTA|frameshift_variant;REV__BLM|p.K1217Nfs*62|2|0.42|ENSG00000197299|chr15:90804254-90804254|A/-|frameshift_variant;REV__BLM|p.N515Mfs*16|2|0.38|ENSG00000197299|chr15:90760909-90760909|A/-|frameshift_variant;REV__ENSG00000197299|ENST00000355112|BLM	41.42661286455405	0.403525789677298	6				NaN	NaN	0	NaN	11232	3823	15052
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15058	38.322	NaN	7639.2	30	0	1276.2	0.035				-1	 	0	68	490.28038638188787	978.5462198305758	2	490.2820129394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11233	3823	15052
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15059	38.322	NaN	37420	30	0	5124.1	0.14			+	-1	FCIKGRTM	8	88	527.7637655909983	1053.5129782487966	2	527.7657470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))FC(Carbamidomethyl (C))IKGRTM_	REV__TPRG1L|p.G271C|1|0.12|ENSG00000158109|chr1:3628595-3628595|G/T|missense_variant	79.9392285194092	0.32408006123154964	6				NaN	NaN	0	NaN	11234	3823	15052
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15076	38.359	NaN	43012	30	0	10191	0.215	+			15208	GTSSLFIYK	9	88	508.2763211452019	1014.5380893572038	2	508.27850341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTSSLFIYK_	BBS10|p.K620Nfs*12|1|0.5|ENSG00000179941|chr12:76346125-76346125|T/-|frameshift_variant;ENSG00000179941|ENST00000650064|BBS10	93.1432384553994	0.056003526918089595	6				NaN	NaN	0	NaN	11248	3826	15075
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15077	38.363	NaN	17467	30	0	5108.4	0.106				-1	 	0	92	529.8202934155831	1057.6260338979662	2	529.8221435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11249	3826	15075
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15078	38.365	NaN	7138	30	0	507.55	0.106	+			48574	VTQDFMMYR	9	85	595.7703023871533	NaN	0	595.7699584960938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VTQDFMMYR_	CTSH|p.N292Mfs*8|1|0.31|ENSG00000103811|chr15:78923050-78923050|T/-|frameshift_variant;ENSG00000103811|ENST00000220166|CTSH;ENST00000527715.5_1_15:79214474-79217794:-|nuORF;ENST00000533777.5_1_15:79214474-79223953:-|nuORF;ENST00000534237.5_1_15:79214474-79224366:-|nuORF	109.43880257439609	0.010203938004363878	6				NaN	NaN	0	NaN	11250	3826	15075
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15079	38.367	NaN	7712.1	30	0	1100.9	0.106			+	24711	LHHHQQSL	8	82	500.2593568101783	998.5041606871566	2	500.2606201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LHHHQQSL_	REV__ENSG00000091009|ENST00000265271|RBM27;REV__RBM27|p.K816Tfs*63|2|0.2|ENSG00000091009|chr5:146267757-146267758|AA/-|frameshift_variant	47.91560031466742	0.6071945918984287	6				NaN	NaN	0	NaN	11251	3826	15075
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15080	38.369	NaN	5151.6	30	0	506.11	0.106	+			46655	VGDPSVHLL	9	69	468.760708526459	NaN	0	468.7607116699219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VGDPSVHLL_	ENSG00000099364|ENST00000338343|FBXL19;nc|ENSG00000099364|Q6PCT2-2|FBXL19;nc|ENSG00000099364|Q6PCT2-3|FBXL19;nc|ENSG00000099364|Q6PCT2|FBXL19	66.42927471994793	0.121898005645852	6				NaN	NaN	0	NaN	11252	3826	15075
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15081	38.37	NaN	5542.3	30	0	263.08	0.036	+			29252	NYADQISRL	9	85	540.277900266563	NaN	0	540.277587890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NYADQISRL_	ENSG00000008294|ENST00000262013|SPAG9;ENSG00000138834|ENST00000610761|MAPK8IP3;ENST00000514613.5_1_17:49067015-49156972:-|nuORF;nc|ENSG00000008294|O60271-2|SPAG9;nc|ENSG00000008294|O60271-3|SPAG9;nc|ENSG00000008294|O60271-4|SPAG9;nc|ENSG00000008294|O60271-5|SPAG9;nc|ENSG00000138834|Q9UPT6-2|MAPK8IP3;nc|ENSG00000138834|Q9UPT6|MAPK8IP3;SPAG9|p.N750Ifs*8|1|0.15|ENSG00000008294|chr17:50993913-50993913|T/-|frameshift_variant;SPAG9|p.R484Kfs*7|1|0.28|ENSG00000008294|chr17:51005237-51005238|-/T|frameshift_variant	51.19269402634007	0.19847346126499396	6				NaN	NaN	0	NaN	11253	3826	15075
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15082	38.371	NaN	10656	30	0	2299	0.142			+	21396	KMMLEWRM	8	75	570.7730009880437	1139.5314490428873	2	570.7755126953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_KMM(Oxidation (M))LEWRM_	REV__ENSG00000206530|ENST00000393845|CFAP44	96.19043198914106	0.25873003980794995	6				NaN	NaN	0	NaN	11254	3826	15075
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15094	38.398	NaN	28066	30	0	3250.9	0.213			+	51514	YVRFQGTAEE	10	81	600.2882534851121	1198.5619540370242	2	600.290283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YVRFQGTAEE_	REV__chr19:41710039-41717458|446|32.11|0.86|5.23|+|2|CEACAM5,CEACAM5|1;REV__ENSG00000105388|ENST00000221992|CEACAM5;REV__nc|ENSG00000105388|P06731-2|CEACAM5	56.72105179125745	0.3956618550748046	6				NaN	NaN	0	NaN	11263	3829	15093
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15095	38.402	NaN	32300	30	0	5461.5	0.106	+			28509	NHRSRVTV	8	85	484.7727981868972	967.5310434405944	2	484.77392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NHRSRVTV_	ENSG00000114993|ENST00000272430|RTKN;ENST00000472518.1_1_2:74659592-74668973:-|nuORF;RTKN|p.L511Pfs*21|1|0.22|ENSG00000114993|chr2:74426403-74426404|-/G|frameshift_variant	76.84663266511073	0.3498490246073164	6				NaN	NaN	0	NaN	11264	3829	15093
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15096	38.404	NaN	16038	30	0	3655.9	0.106				-1	 	0	71	464.7648255748344	927.5150982164688	2	464.76593017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11265	3829	15093
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15097	38.405	NaN	10947	30	0	2400.8	0.106	+			27984	MVQIQFHQ	8	69	515.760599667158	1029.5066464011159	2	515.7621459960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MVQIQFHQ_	sp|F5HE44|US12_HCMVMUncharacterizedproteinUS12OS=Humancytomegalovirus(strainMerlin)OX=295027GN=US12PE=3SV=1;sp|P09721|US12_HCMVAUncharacterizedproteinHVLF6OS=Humancytomegalovirus(strainAD169)OX=10360GN=US12PE=3SV=1	71.37791200682192	0.3954169775488141	6				NaN	NaN	0	NaN	11266	3829	15093
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15098	38.407	NaN	9337.9	30	0	918.22	0.106	+			33900	RRRPLLPP	8	76	502.8272550493001	1003.6399571654002	2	502.8285827636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RRRPLLPP_	ENSG00000167543|ENST00000301057|TP53I13	37.028477286268924	0.6747514403204248	6				NaN	NaN	0	NaN	11267	3829	15093
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15099	38.409	NaN	9945.8	30	0	1594.8	0.106			+	17604	IEGFYQVDR	9	79	563.7782860866344	1125.5420192400686	2	563.781982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_IEGFYQVDR_	REV__ENSG00000131400|ENST00000253719|NAPSA	66.42927471994793	0.16001998865088202	6				NaN	NaN	0	NaN	11268	3829	15093
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15100	38.411	NaN	12519	30	0	2118.8	0.035	+			25822	LSDGLLLEE	9	66	494.7646198728949	987.5146868125898	2	494.7662048339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LSDGLLLEE_	ENSG00000163362|ENST00000413687|INAVA;nc|ENSG00000163362|Q3KP66|INAVA	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	11269	3829	15093
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15115	38.442	NaN	28902	30	0	6250.4	0.214	+			25823	LSDGLLLEE	9	80	494.7646198728949	987.5146868125898	2	494.76605224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSDGLLLEE_	ENSG00000163362|ENST00000413687|INAVA;nc|ENSG00000163362|Q3KP66|INAVA	51.33545320467046	0.2872990594074956	6				NaN	NaN	0	NaN	11281	3832	15114
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15116	38.446	NaN	26552	30	0	3862.1	0.106	+			3261	ASLLYPGAQ	9	90	460.2480970710405	918.481641208881	2	460.249267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASLLYPGAQ_	ENST00000506465.1_1_5:176873223-176874669:-|nuORF	87.75429964447693	0.0711966946989736	6				NaN	NaN	0	NaN	11282	3832	15114
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15117	38.448	NaN	8506.4	30	0	1711.6	0.106			+	17527	IDNAGRDI	8	63	437.2255451766457	872.4365374200914	2	437.22662353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IDNAGRDI_	REV__tr|U7SSD2|U7SSD2_FUSNUPyruvate:ferredoxin(Flavodoxin)oxidoreductaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01591PE=3SV=1	68.78682469695295	0.41700713582915416	6				NaN	NaN	0	NaN	11283	3832	15114
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15118	38.45	NaN	3373.4	30	0	386.93	0.106				-1	 	0	63	454.7566231456813	907.4986933581627	2	454.7576599121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11284	3832	15114
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15119	38.451	NaN	12814	30	0	1047	0.106	+			30944	QELTAAARPF	10	89	552.2962543931009	1102.5779558530016	2	552.2979736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QELTAAARPF_	ENSG00000143374|ENST00000369064|TARS2;ENST00000466989.1_1_1:150463888-150464139:+|nuORF;ENST00000467982.6_1_1:150463888-150471031:+|nuORF;nc|ENSG00000143374|Q9BW92-2|TARS2	56.632244143249146	0.3964695498866976	6				NaN	NaN	0	NaN	11285	3832	15114
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15120	38.453	NaN	17144	30	0	7900.8	0.034	+			50597	YDLAFPVQ	8	77	476.7423927468616	951.4702325605232	2	476.7437744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YDLAFPVQ_	ENST00000255977.6_2_7:140153158-140153341:-|nuORF	47.91560031466742	0.6071945918984287	6				NaN	NaN	0	NaN	11286	3832	15114
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15121	38.454	NaN	4736.2	30	0	1393.3	0.143			+	3206	ASKKVRTALD	10	54	363.55247706798934	1087.6356018041681	3	363.55364990234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ASKKVRTALD_	REV__ENSG00000170759|ENST00000302418|KIF5B	16.473147378115264	0.7327422906225664	6				NaN	NaN	0	NaN	11287	3832	15114
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15136	38.487	NaN	68410	30	0	23143	0.178	+			12734	GEKVDFNTF	9	90	528.7524528604248	1055.4903527876495	2	528.75439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEKVDFNTF_	ENSG00000176153|ENST00000389614|GPX2;GPX2|p.W152*|1|0.31|ENSG00000176153|chr14:64939605-64939605|C/-|frameshift_variant	104.01359247289065	0.03510646158778409	6				NaN	NaN	0	NaN	11299	3835	15135
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15137	38.49	NaN	54962	30	0	13123	0.106			+	22819	KVFRRNTK	8	88	524.8221259247239	1047.6296989162477	2	524.82421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KVFRRNTK_	REV__ENSG00000162777|ENST00000357640|DENND2D;REV__ENST00000468692.1_1_1:111730229-111731929:-|nuORF;REV__nc|ENSG00000162777|Q9H6A0-2|DENND2D	58.78195531508484	0.5138399468736706	6				NaN	NaN	0	NaN	11300	3835	15135
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15138	38.492	NaN	20190	30	0	2590.5	0.106	+			11261	FIMDRAQAL	9	82	532.7792885719854	1063.5440242107707	2	532.7822875976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FIMDRAQAL_	ENSG00000105576|ENST00000425528|TNPO2;ENST00000588484.1_1_19:12826020-12830096:-|nuORF;nc|ENSG00000105576|O14787-2|TNPO2;TNPO2|p.H347Pfs*4|1|0.35|ENSG00000105576|chr19:12711373-12711374|-/G|frameshift_variant	98.58198989935565	0.04066992115528678	6				NaN	NaN	0	NaN	11301	3835	15135
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15139	38.494	NaN	9696.8	30	0	2069.5	0.106	+			35968	SEGTFGIHV	9	75	473.73536071526	NaN	0	473.7351989746094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SEGTFGIHV_	ENSG00000088888|ENST00000428216|MAVS;nc|ENSG00000088888|Q7Z434-4|MAVS	180.49460243208492	0.0029405521838600395	6				NaN	NaN	0	NaN	11302	3835	15135
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15140	38.496	NaN	5265.3	30	0	1020.9	0.106			+	7706	DLPVRPLPT	9	46	336.5344378546052	NaN	0	336.5343933105469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_DLPVRPLPT_	REV__ENSG00000106290|ENST00000453269|TAF6;REV__ENST00000487288.1_1_7:99711182-99711832:-|nuORF;REV__nc|ENSG00000106290|P49848-2|TAF6;REV__nc|ENSG00000106290|P49848-3|TAF6;REV__nc|ENSG00000106290|P49848-4|TAF6	25.57405402267927	0.3484490411150625	6				NaN	NaN	0	NaN	11303	3835	15135
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15141	38.498	NaN	12931	30	0	1890.7	0.106	+			14780	GTLAEFIQK	9	86	503.7802387611917	1005.5459245891834	2	503.782470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTLAEFIQK_	ENSG00000160602|ENST00000268766|NEK8;ENST00000584342.5_1_17:27052953-27062286:+|nuORF;ENST00000593261.1_1_17:27055855-27062286:+|nuORF	98.58198989935565	0.04066992115528678	6				NaN	NaN	0	NaN	11304	3835	15135
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15142	38.499	NaN	14739	30	0	2697.1	0.036				-1	 	0	76	537.2673708066834	1072.5201886801667	2	537.2688598632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11305	3835	15135
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15160	38.537	NaN	88174	30	0	8969.7	0.214				-1	 	0	97	538.8069393457768	1075.5993257583534	2	538.8087158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11320	3838	15159
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15161	38.54	NaN	15195	30	0	1915.2	0.106	+			7444	DFGEPRIQQ	9	82	545.2702845282241	1088.5260161232482	2	545.2720947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DFGEPRIQQ_	ENSG00000115602|ENST00000233954|IL1RL1;ENST00000427077.1_1_2:102957780-102959889:+|nuORF;nc|ENSG00000115602|Q01638-2|IL1RL1;nc|ENSG00000115602|Q01638-4|IL1RL1	52.936696900407355	0.27249468807391813	6				NaN	NaN	0	NaN	11321	3838	15159
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15162	38.542	NaN	8269.6	30	0	452.13	0.106	+			18456	ISEENFRVM	9	77	562.771966545006	1123.5293801568118	2	562.7739868164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ISEENFRVM_	ENSG00000138160|ENST00000260731|KIF11;KIF11|p.K673Rfs*3|1|0.12|ENSG00000138160|chr10:92637397-92637397|A/-|frameshift_variant	150.36159442982594	0.006784847064083231	6				NaN	NaN	0	NaN	11322	3838	15159
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15163	38.544	NaN	5147.1	30	0	1085.3	0.106	+			9354	EIRPDGQTL	9	67	514.7727019785314	1027.5308510238626	2	514.7742309570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EIRPDGQTL_	ENST00000491165.5_2_3:113396224-113415451:-|nuORF	35.15202426646627	0.4747332964206883	6				NaN	NaN	0	NaN	11323	3838	15159
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15164	38.546	NaN	7728.6	30	0	1110	0.106	+			30062	PQETLNQINK	10	76	592.8174127741784	1183.6202726151566	2	592.8193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PQETLNQINK_	ENSG00000124783|ENST00000244763|SSR1;nc|ENSG00000124783|P43307-2|SSR1	104.0567914643314	0.06564926686336217	6				NaN	NaN	0	NaN	11324	3838	15159
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15165	38.548	NaN	3643.2	30	0	741.52	0.035	+			12243	GASLADIMAK	10	73	488.7595379562853	975.5045229793707	2	488.76007080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GASLADIMAK_	ENSG00000114391|ENST00000394077|RPL24;ENST00000446071.1_1_9:72832122-72832404:+|nuORF	78.26377905018397	0.20980573808910843	6				NaN	NaN	0	NaN	11325	3838	15159
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15166	38.548	NaN	6711.2	30	0	1037.5	0.14	+			28299	NEDPNARLI	9	73	521.2704646204663	1040.5263763077326	2	521.2717895507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NEDPNARLI_	ENSG00000129250|ENST00000320785|KIF1C;KIF1C|p.K1057Sfs*31|1|0.14|ENSG00000129250|chr17:5024005-5024005|A/-|frameshift_variant;KIF1C|p.L962Cfs*126|1|0.31|ENSG00000129250|chr17:5023717-5023717|G/-|frameshift_variant;KIF1C|p.Y1081Ifs*15|1|0.28|ENSG00000129250|chr17:5024072-5024073|-/C|frameshift_variant	58.22992032128504	0.22837015374068087	6				NaN	NaN	0	NaN	11326	3838	15159
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15184	38.587	NaN	76829	30	0	12155	0.214	+			10626	EYNNNFHVL	9	94	575.2686085221471	1148.5226641110942	2	575.2698974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EYNNNFHVL_	ENSG00000151151|ENST00000373935|IPMK;ENST00000425988.1_1_13:23411483-23411888:-|nuORF	172.03106254824962	0.0024202251894594514	6				NaN	NaN	0	NaN	11341	3841	15183
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15185	38.59	NaN	22725	30	0	10408	0.106	+			15269	GTTITLVLK	9	71	473.30170756880386	944.5888622044077	2	473.302978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GTTITLVLK_	ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF;ENST00000559111.1_1_15:99798356-99798647:+|nuORF	65.46538089061403	0.16805504838372562	6				NaN	NaN	0	NaN	11342	3841	15183
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15186	38.592	NaN	23478	30	0	3272	0.106	+			37262	SLADFQIEK	9	85	525.7772812335156	1049.5400095338312	2	525.7772827148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLADFQIEK_	ENSG00000119408|ENST00000320246|NEK6;nc|ENSG00000119408|Q9HC98-2|NEK6;nc|ENSG00000119408|Q9HC98-3|NEK6;nc|ENSG00000119408|Q9HC98-4|NEK6	62.166158670854095	0.19555750436066183	6				NaN	NaN	0	NaN	11343	3841	15183
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15187	38.594	NaN	6946.1	30	0	1047.3	0.106			+	47145	VLQQYIQI	8	71	502.7921805988558	NaN	0	502.7921447753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VLQQYIQI_	REV__ENSG00000197535|ENST00000399233|MYO5A;REV__nc|ENSG00000197535|Q9Y4I1-2|MYO5A;REV__nc|ENSG00000197535|Q9Y4I1|MYO5A	76.84663266511073	1.7418937515398478	6				NaN	NaN	0	NaN	11344	3841	15183
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15188	38.596	NaN	5530.7	30	0	346.32	0.106	+			25746	LSAAASAPAEK	11	82	508.2763211452019	1014.5380893572038	2	509.2770690917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSAAASAPAEK_	ENSG00000179403|ENST00000476993|VWA1	41.42661286455405	0.5384226294179143	6				NaN	NaN	0	NaN	11345	3841	15183
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15189	38.598	NaN	4375	30	0	990.99	0.037			+	15809	GVVVDVGT	8	50	373.20987774270935	NaN	0	373.2097473144531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GVVVDVGT_	REV__tr|U7SK95|U7SK95_FUSNURNAhelicaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02151PE=3SV=1	28.2542754592877	1.7418937515398478	6				NaN	NaN	0	NaN	11346	3841	15183
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15190	38.599	NaN	7375.8	30	0	692.19	0.141				-1	PYSSCSRNF	9	74	559.242255584732	1116.469958236264	2	559.2445678710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_PYSSC(Carbamidomethyl (C))SRNF_	ENST00000565912.1_1_16:57411753-57412206:+|nuORF	55.50420428727701	0.2510918378945873	6				NaN	NaN	0	NaN	11347	3841	15183
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15208	38.637	NaN	25896	30	0	4070.1	0.214	+			9902	EQNRISLIQ	9	81	550.8070863112938	1099.5996196893875	2	550.808837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EQNRISLIQ_	CPD|p.R783I|1|0.32|ENSG00000108582|chr17:30442425-30442425|G/T|missense_variant	75.04331003522576	0.118981335847003	6				NaN	NaN	0	NaN	11362	3844	15207
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15209	38.641	NaN	10021	30	0	1401.5	0.106				-1	EMVVSCVIK	9	79	532.7792885719854	1063.5440242107707	2	533.2825927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_EMVVSC(Carbamidomethyl (C))VIK_	ENSG00000173064|ENST00000682272|HECTD4;HECTD4|p.A3108Gfs*4|1|0.12|ENSG00000173064|chr12:112185242-112185243|CC/-|frameshift_variant;HECTD4|p.A3108Rfs*26|1|0.37|ENSG00000173064|chr12:112185242-112185242|C/-|frameshift_variant;HECTD4|p.A4187Pfs*44|1|0.07|ENSG00000173064|chr12:112163201-112163201|C/-|frameshift_variant;HECTD4|p.L1880Pfs*22|1|0.19|ENSG00000173064|chr12:112231674-112231675|-/TAGGA|frameshift_variant;nc|ENSG00000173064|Q9Y4D8-2|HECTD4;nc|ENSG00000173064|Q9Y4D8-4|HECTD4;nc|ENSG00000173064|Q9Y4D8|HECTD4	44.377184641726394	0.36891676396732553	6				NaN	NaN	0	NaN	11363	3844	15207
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15210	38.643	NaN	5761.9	30	0	528.12	0.106	+			24127	LEKTEFTL	8	64	490.76798924663115	NaN	0	490.7685241699219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LEKTEFTL_	ENSG00000168386|ENST00000477258|FILIP1L;FILIP1L|p.L673Yfs*5|1|0.1|ENSG00000168386|chr3:99849658-99849658|A/-|frameshift_variant;FILIP1L|p.R478Q|1|0.29|ENSG00000168386|chr3:99850243-99850243|C/T|missense_variant;nc|ENSG00000168386|Q4L180-2|FILIP1L;nc|ENSG00000168386|Q4L180-3|FILIP1L;nc|ENSG00000168386|Q4L180-5|FILIP1L;nc|ENSG00000168386|Q4L180-6|FILIP1L;nc|ENSG00000168386|Q4L180-7|FILIP1L;nc|ENSG00000168386|Q4L180|FILIP1L	47.657333605630114	1.7418937515398478	6				NaN	NaN	0	NaN	11364	3844	15207
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15211	38.645	NaN	12311	30	0	2484.1	0.106	+			25596	LQIQNDYLFQ	10	80	641.3269234154976	1280.6392938977951	2	641.3289184570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LQIQNDYLFQ_	ENSG00000081913|ENST00000262719|PHLPP1;PHLPP1|p.N1186Tfs*10|1|0.14|ENSG00000081913|chr18:62963464-62963464|A/-|frameshift_variant;PHLPP1|p.T1236Nfs*38|2|0.39|ENSG00000081913|chr18:62972653-62972654|-/A|frameshift_variant	90.36981228632155	0.12895663264417576	6				NaN	NaN	0	NaN	11365	3844	15207
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15212	38.646	NaN	10939	30	0	3108.8	0.106	+			11403	FLPPPHSHFL	10	79	596.3197544503105	1190.6249559674209	2	596.3213500976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FLPPPHSHFL_	ENST00000487143.5_1_2:168811849-168812002:-|nuORF	23.04248740728303	0.69165701907106	6				NaN	NaN	0	NaN	11366	3844	15207
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15213	38.648	NaN	5959.3	30	0	902.01	0.032				-1	 	0	53	389.7379158610859	777.4612787889719	2	389.73883056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11367	3844	15207
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15214	38.649	NaN	5996.6	30	0	875.4	0.14	+			13649	GMSSVFFNK	9	72	508.74559962120026	1015.4766463092005	2	508.7474670410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GMSSVFFNK_	ENSG00000144908|ENST00000393434|ALDH1L1;ENST00000467370.5_1_3:125824416-125834086:-|nuORF;nc|ENSG00000144908|O75891-2|ALDH1L1;nc|ENSG00000144908|O75891-3|ALDH1L1	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	11368	3844	15207
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15232	38.688	NaN	69200	30	0	15422	0.214				-1	 	0	85	457.27547114881224	912.5363893644245	2	457.2766418457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11383	3847	15231
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15233	38.691	NaN	27547	30	0	6228.4	0.106			+	18484	ISGERQLEE	9	81	530.7675824061486	1059.520611879097	2	530.7695922851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ISGERQLEE_	REV__ENST00000589222.5_2_17:59457929-59469483:+|nuORF	84.9155231211612	0.07920012719736333	6				NaN	NaN	0	NaN	11384	3847	15231
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15234	38.694	NaN	17599	30	0	2550.3	0.106	+			17310	IAELNANLS	9	91	472.75510992902207	943.4956669248442	2	472.7557067871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IAELNANLS_	DNAH17|p.K3895Nfs*2|1|0.24|ENSG00000187775|chr17:78439210-78439210|T/-|frameshift_variant;DNAH17|p.N4131Tfs*34|2|0.38|ENSG00000187775|chr17:78429136-78429136|G/-|frameshift_variant;ENSG00000187775|ENST00000389840|DNAH17;ENST00000586052.5_1_17:76450753-76471822:-|nuORF	75.04331003522576	0.118981335847003	6				NaN	NaN	0	NaN	11385	3847	15231
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15235	38.695	NaN	9173.4	30	0	569.58	0.106			+	7882	DRPRCASLL	9	89	515.777414461133	1029.540275989066	2	515.779052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DRPRCASLL_	REV__ENSG00000143869|ENST00000272224|GDF7;REV__GDF7|p.R228Afs*41|1|0.5|ENSG00000143869|chr2:20670747-20670747|C/-|frameshift_variant	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	11386	3847	15231
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15236	38.697	NaN	6036.4	30	0	723.29	0.106	+			51109	YLYGQTTTY	9	80	555.2592285395019	1108.5039041458037	2	555.2615966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YLYGQTTTY_	ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A;TOP2A|p.K1199Efs*11|1|0.23|ENSG00000131747|chr17:40396408-40396409|-/C|frameshift_variant;TOP2A|p.T1205Hfs*19|4|0.35|ENSG00000131747|chr17:40396390-40396390|T/-|frameshift_variant	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	11387	3847	15231
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15237	38.699	NaN	15989	30	0	2208.7	0.037	+			43553	THNSSLEYNI	10	83	589.2781797969371	1176.5418066606742	2	589.27978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_THNSSLEYNI_	ENSG00000092964|ENST00000521913|DPYSL2;nc|ENSG00000092964|Q16555-2|DPYSL2;nc|ENSG00000092964|Q16555|DPYSL2	58.22992032128504	0.38193887838457763	6				NaN	NaN	0	NaN	11388	3847	15231
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15238	38.7	NaN	2493	30	0	176.37	0.145	+			32742	RAPKGRTFGD	10	56	368.86865565851826	1103.5841375757548	3	368.8698425292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RAPKGRTFGD_	ENSG00000188611|ENST00000682911|ASAH2;ENSG00000204147|ENST00000647317|ASAH2B;nc|ENSG00000188611|Q9NR71-2|ASAH2;nc|ENSG00000204147|P0C7U1|ASAH2B	27.882242232435846	0.6521336255503853	6				NaN	NaN	0	NaN	11389	3847	15231
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15256	38.739	NaN	14563	30	0	1572.2	0.214			+	28996	NSMRVMRL	8	81	511.7652240348033	1021.5158951364066	2	511.7673034667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_NSMRVM(Oxidation (M))RL_	REV__BTBD7|p.H927Tfs*21|1|0.2|ENSG00000011114|chr14:93242893-93242894|-/T|frameshift_variant;REV__BTBD7|p.P760Lfs*61|1|0.45|ENSG00000011114|chr14:93246129-93246129|G/-|frameshift_variant;REV__BTBD7|p.P768Qfs*53|2|0.3|ENSG00000011114|chr14:93246105-93246105|G/-|frameshift_variant;REV__ENSG00000011114|ENST00000334746|BTBD7;REV__nc|ENSG00000011114|Q9P203-5|BTBD7	51.33545320467046	0.5859736979383976	6				NaN	NaN	0	NaN	11404	3850	15255
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15257	38.743	NaN	15442	30	0	6685.7	0.106				-1	VKSVQRCMALA	11	71	631.8381129944305	1261.661673055661	2	631.8400268554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_VKSVQRC(Carbamidomethyl (C))MALA_	ENSG00000123136|ENST00000242776|DDX39A;ENST00000587730.5_1_19:14520346-14520718:-|nuORF;ENST00000588692.5_1_19:14519750-14520718:-|nuORF	20.030474535948922	0.7766990143561855	6				NaN	NaN	0	NaN	11405	3850	15255
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15258	38.745	NaN	12592	30	0	1745.7	0.106	+			17483	ICTYPFVF	8	71	495.2438293318021	988.4731057304042	2	495.2454528808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ICTYPFVF_	ENSG00000148634|ENST00000373700|HERC4;ENST00000427635.6_1_10:69682690-69747802:-|nuORF;nc|ENSG00000148634|Q5GLZ8-3|HERC4;nc|ENSG00000148634|Q5GLZ8-6|HERC4;nc|ENSG00000148634|Q5GLZ8|HERC4	46.76643321282427	0.6143254112625767	6				NaN	NaN	0	NaN	11406	3850	15255
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15259	38.746	NaN	4338.5	30	0	708.95	0.106			+	18273	IPHVEHLAQ	9	72	522.2848209037664	1042.5550888743328	2	522.2907104492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IPHVEHLAQ_	REV__CBL|p.L272*|1|0.25|ENSG00000110395|chr11:119274894-119274894|T/-|frameshift_variant;REV__CBL|p.R206Q|1|0.33|ENSG00000110395|chr11:119273894-119273894|G/A|missense_variant;REV__CBL|p.V581Cfs*4|1|0.08|ENSG00000110395|chr11:119285359-119285360|-/C|frameshift_variant;REV__ENSG00000110395|ENST00000264033|CBL	63.30626980617807	0.18605348971131092	6				NaN	NaN	0	NaN	11407	3850	15255
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15260	38.748	NaN	5385.3	30	0	577.84	0.106			+	21418	KMTMNDIIM	9	82	556.7618755165561	1111.509198099912	2	556.7642211914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_KMTMNDIIM(Oxidation (M))_	REV__ENSG00000162753|ENST00000367714|SLC9C2	51.19269402634007	0.2889735674168909	6				NaN	NaN	0	NaN	11408	3850	15255
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15261	38.75	NaN	4668.8	30	0	1116.8	0.035				-1	LGQRLRAR	8	68	506.31121048199293	1010.6078680307859	2	506.31298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LGQRLRAR_	ENST00000601984.1_1_19:7922791-7923253:+|nuORF	20.481830146152948	0.8005983782650069	6				NaN	NaN	0	NaN	11409	3850	15255
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15262	38.751	NaN	3040.2	30	0	356.06	0.139			+	28167	NAMSRALIG	9	66	466.75452468743384	931.4944964416677	2	466.7559509277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NAMSRALIG_	REV__ENSG00000120051|ENST00000369704|CFAP58	74.25504064058377	0.12238981753128622	6				NaN	NaN	0	NaN	11410	3850	15255
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15278	38.786	NaN	23116	30	0	12911	0.214				-1	 	0	64	406.7643534373093	811.5141539414186	2	406.7655944824219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11423	3853	15277
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15279	38.789	NaN	12941	30	0	1201.6	0.106	+			49560	VYDQQREVY	9	82	600.2882534851121	1198.5619540370242	2	600.2903442382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYDQQREVY_	CEP55|p.D247Ifs*9|1|0.25|ENSG00000138180|chr10:93516987-93516987|A/-|frameshift_variant;ENSG00000138180|ENST00000371485|CEP55;nc|ENSG00000138180|Q53EZ4-2|CEP55	60.11826168202944	0.21262886028301267	6				NaN	NaN	0	NaN	11424	3853	15277
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15280	38.791	NaN	10496	30	0	1195.4	0.106				-1	 	0	69	491.270171630596	980.525790327992	2	491.27154541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11425	3853	15277
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15281	38.793	NaN	12325	30	0	1888.9	0.106			+	31989	QRESQCLNDE	10	86	611.2626256322183	1220.5106983312364	2	611.2642211914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QRESQCLNDE_	REV__ENSG00000188994|ENST00000369577|ZNF292;REV__nc|ENSG00000188994|O60281-2|ZNF292;REV__ZNF292|p.N2626Kfs*10|1|0.07|ENSG00000188994|chr6:87261506-87261509|ATTC/-|frameshift_variant;REV__ZNF292|p.R2545Gfs*14|1|0.18|ENSG00000188994|chr6:87261256-87261256|A/-|frameshift_variant	72.87924865735499	0.25379688738724415	6				NaN	NaN	0	NaN	11426	3853	15277
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15282	38.795	NaN	6604.6	30	0	687.56	0.106	+			28641	NLEPFLKR	8	72	508.7975921039334	1015.5806312746669	2	508.7991638183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NLEPFLKR_	ENSG00000170458|ENST00000302014|CD14	82.24051045832904	0.30490469762271794	6				NaN	NaN	0	NaN	11427	3853	15277
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15283	38.797	NaN	7200.1	30	0	736.85	0.037	+			29316	NYQGHFHLF	9	84	581.7737955942422	1161.5330382552843	2	581.7755737304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NYQGHFHLF_	ENST00000283632.4_1_2:86968058-86968091:+|nuORF	153.88471797397582	0.005963663451343155	6				NaN	NaN	0	NaN	11428	3853	15277
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15284	38.798	NaN	4736.7	30	0	272.28	0.141			+	-1	MLKCVCSEF	9	77	566.747661879247	1131.4807708252938	2	566.7496948242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))LKC(Carbamidomethyl (C))VCSEF_	REV__CFTR|p.E1044Dfs*20|1|0.04|ENSG00000001626|chr7:117610661-117610662|-/TCAAAGAAAAC|frameshift_variant;REV__CFTR|p.G1208Afs*3|1|0.3|ENSG00000001626|chr7:117627672-117627672|G/-|frameshift_variant;REV__CFTR|p.L1258Ffs*7|1|0.26|ENSG00000001626|chr7:117642487-117642488|-/T|frameshift_variant;REV__CFTR|p.S1297Lfs*31|1|0.28|ENSG00000001626|chr7:117652852-117652852|T/-|frameshift_variant;REV__ENSG00000001626|ENST00000003084|CFTR;REV__nc|ENSG00000001626|P13569-2|CFTR	44.116797842482775	0.37197099687881774	6				NaN	NaN	0	NaN	11429	3853	15277
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15300	38.833	NaN	67424	30	0	7512.6	0.214			+	37232	SKQRYTGGVS	10	86	541.7835076787159	1081.5524624242316	2	541.7854614257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SKQRYTGGVS_	REV__ENSG00000197555|ENST00000381232|SIPA1L1;REV__nc|ENSG00000197555|O43166-3|SIPA1L1;REV__nc|ENSG00000197555|O43166|SIPA1L1	79.71258880314673	0.19796908725841375	6				NaN	NaN	0	NaN	11442	3856	15299
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15301	38.836	NaN	6131.9	30	0	1990.7	0.106				-1	MGKNTGKIVV	10	64	531.800412765363	1061.586272597526	2	531.8016357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_M(Oxidation (M))GKNTGKIVV_	ENSG00000180011|ENST00000322342|PTGR3;nc|ENSG00000180011|Q8N4Q0-2|PTGR3	36.446750945000026	0.5818864909973037	6				NaN	NaN	0	NaN	11443	3856	15299
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15302	38.838	NaN	6162.1	30	0	582.42	0.106	+			29953	PNEMMREIRK	10	74	660.3314700609893	1318.6483871887785	2	660.3334350585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_PNEM(Oxidation (M))MREIRK_	ENSG00000072518|ENST00000402010|MARK2;nc|ENSG00000072518|Q7KZI7-10|MARK2;nc|ENSG00000072518|Q7KZI7-11|MARK2;nc|ENSG00000072518|Q7KZI7-12|MARK2;nc|ENSG00000072518|Q7KZI7-13|MARK2;nc|ENSG00000072518|Q7KZI7-14|MARK2;nc|ENSG00000072518|Q7KZI7-15|MARK2;nc|ENSG00000072518|Q7KZI7-16|MARK2;nc|ENSG00000072518|Q7KZI7-2|MARK2;nc|ENSG00000072518|Q7KZI7-3|MARK2;nc|ENSG00000072518|Q7KZI7-4|MARK2;nc|ENSG00000072518|Q7KZI7-5|MARK2;nc|ENSG00000072518|Q7KZI7-6|MARK2;nc|ENSG00000072518|Q7KZI7-7|MARK2;nc|ENSG00000072518|Q7KZI7-8|MARK2;nc|ENSG00000072518|Q7KZI7-9|MARK2	49.44154591367651	0.46214596422418036	6				NaN	NaN	0	NaN	11444	3856	15299
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15303	38.84	NaN	4011.3	30	0	962.31	0.106			+	5873	AVITTVAAA	9	65	408.74509739505635	815.4756418569127	2	408.74627685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVITTVAAA_	REV__ENSG00000181555|ENST00000409792|SETD2	25.450171626174864	0.5654022654467333	6				NaN	NaN	0	NaN	11445	3856	15299
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15304	38.842	NaN	10691	30	0	1369.7	0.106				-1	 	0	86	524.2847900486139	1046.5550271640277	2	524.286865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11446	3856	15299
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15305	38.844	NaN	7926.9	30	0	808.2	0.036			+	-1	EKHMHCLF	8	71	551.2517501325083	1100.4889473318165	2	551.2537841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_EKHMHC(Carbamidomethyl (C))LF_	REV__ENSG00000176986|ENST00000345254|SEC24C;REV__nc|ENSG00000176986|P53992-2|SEC24C	79.9392285194092	0.32408006123154964	6				NaN	NaN	0	NaN	11447	3856	15299
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15306	38.844	NaN	6650.3	30	0	784.25	0.141	+			5516	AVAGDFALINK	11	87	559.811610885055	1117.6086688369098	2	559.814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AVAGDFALINK_	ATE1|p.A234Gfs*14|1|0.05|ENSG00000107669|chr10:121902505-121902506|-/T|frameshift_variant;ATE1|p.G197Vfs*3|1|0.03|ENSG00000107669|chr10:121902614-121902615|-/A|frameshift_variant;ENSG00000107669|ENST00000224652|ATE1;nc|ENSG00000107669|O95260-2|ATE1	120.63048641472336	0.018968965619156397	6				NaN	NaN	0	NaN	11448	3856	15299
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15322	38.879	NaN	44526	30	0	7506.2	0.214			+	11976	FVNNTRWH	8	90	537.2673708066834	1072.5201886801667	2	537.2689208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FVNNTRWH_	REV__ENST00000567631.1_1_16:11984978-11988885:-|nuORF	63.30626980617807	0.4690498839812213	6				NaN	NaN	0	NaN	11461	3859	15321
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15323	38.883	NaN	6249.5	30	0	1239.3	0.106			+	3197	ASKKIEGKF	9	52	336.5344378546052	NaN	0	336.5342712402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASKKIEGKF_	REV__tr|U7SUA5|U7SUA5_FUSNUOligopeptidaseFOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01160PE=3SV=1	38.80614096846853	0.28164298475537564	6				NaN	NaN	0	NaN	11462	3859	15321
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15324	38.885	NaN	25292	30	0	4283.1	0.106				-1	RDKQILLCT	9	90	382.8814465608431	1145.6225102827293	3	382.8829040527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_RDKQILLC(Carbamidomethyl (C))T_	ENSG00000141013|ENST00000268699|GAS8;ENST00000540721.5_1_16:90089090-90108732:+|nuORF;ENST00000569558.5_1_16:90103573-90109750:+|nuORF;nc|ENSG00000141013|O95995-2|GAS8	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	11463	3859	15321
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15325	38.887	NaN	8360.2	30	0	1061.4	0.106			+	-1	CKAPLDYGCTI	11	77	620.7878372798245	1239.561121626449	2	620.790283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_CKAPLDYGC(Carbamidomethyl (C))TI_	REV__ENST00000490428.5_1_20:13976436-14665616:+|nuORF	44.377184641726394	0.49804979881800077	6				NaN	NaN	0	NaN	11464	3859	15321
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15326	38.889	NaN	6177.6	30	0	449.99	0.106	+			20408	KETGQKIN	8	69	459.2565509692136	916.4985490052272	2	459.2579650878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KETGQKIN_	ENSG00000068912|ENST00000185150|ERLEC1;nc|ENSG00000068912|Q96DZ1-2|ERLEC1;nc|ENSG00000068912|Q96DZ1-3|ERLEC1	47.657333605630114	0.6087971902037268	6				NaN	NaN	0	NaN	11465	3859	15321
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15327	38.89	NaN	10099	30	0	4241.8	0.034	+			46217	VEAHPPRR	8	71	481.26980271583477	960.5250524984696	2	481.270263671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VEAHPPRR_	ENST00000311161.11_1_11:66136954-66139516:-|nuORF	53.351449002276354	0.5676011784961348	6				NaN	NaN	0	NaN	11466	3859	15321
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15328	38.891	NaN	5649.3	30	0	354.24	0.143			+	-1	CAGTSPLCLTI	11	75	596.7894227544388	NaN	0	596.7891235351562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))AGTSPLC(Carbamidomethyl (C))LTI_	REV__ENST00000461791.1_1_3:196381463-196381676:+|nuORF	52.936696900407355	0.2942262773185686	6				NaN	NaN	0	NaN	11467	3859	15321
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15346	38.93	NaN	60878	30	0	16018	0.207				-1	 	0	89	536.8019122364362	1071.5892715396724	2	536.8035888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11482	3862	15345
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15347	38.934	NaN	27460	30	0	3113.7	0.106			+	1504	AFWWVAKM	8	94	527.7623413734284	1053.5101298136567	2	527.76416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_AFWWVAKM(Oxidation (M))_	REV__TMEM200A|p.L97Cfs*29|1|0.17|ENSG00000164484|chr6:130440710-130440710|A/-|frameshift_variant	77.94384346573518	0.3407065481025094	6				NaN	NaN	0	NaN	11483	3862	15345
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15348	38.936	NaN	6702.1	30	0	1151.6	0.106			+	7877	DRLKACSLLQ	10	77	573.8189644817521	1145.6233760303041	2	573.8209228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DRLKACSLLQ_	REV__ENST00000530737.2_1_11:828562-829423:+|nuORF	63.53385203322761	0.33370026130094593	6				NaN	NaN	0	NaN	11484	3862	15345
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15349	38.938	NaN	13272	30	0	5159.7	0.106				-1	 	0	79	515.8091880960646	1029.6038232589292	2	515.810791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11485	3862	15345
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15350	38.94	NaN	11674	30	0	1896	0.106			+	8344	EAKSTVLQL	9	84	494.7857351614716	987.5569173897433	2	494.7869873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EAKSTVLQL_	REV__ENSG00000197959|ENST00000627582|DNM3;REV__nc|ENSG00000197959|Q9UQ16-2|DNM3;REV__nc|ENSG00000197959|Q9UQ16-4|DNM3;REV__nc|ENSG00000197959|Q9UQ16-5|DNM3;REV__nc|ENSG00000197959|Q9UQ16|DNM3	104.0567914643314	0.03506238181059741	6				NaN	NaN	0	NaN	11486	3862	15345
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15351	38.941	NaN	4264.7	30	0	1233.7	0.106	+			3100	ASGGIFVLK	9	61	446.2682717823197	NaN	0	446.2682189941406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ASGGIFVLK_	ENSG00000030066|ENST00000378460|NUP160;ENST00000526870.1_3_11:47861380-47861614:-|nuORF;nc|ENSG00000030066|Q12769|NUP160	54.776311868738084	0.17377682019723872	6				NaN	NaN	0	NaN	11487	3862	15345
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15352	38.943	NaN	19619	30	0	2569.8	0.038	+			20902	KISTGMMMKE	10	79	594.2775101758649	1186.5404674185297	2	594.2796630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Oxidation (M)	_KISTGM(Oxidation (M))MM(Oxidation (M))KE_	ENSG00000042781|ENST00000307340|USH2A;nc|ENSG00000042781|O75445-3|USH2A;USH2A|p.E5096Gfs*82|1|0.44|ENSG00000042781|chr1:215634469-215634470|-/C|frameshift_variant;USH2A|p.T3753Lfs*31|1|0.37|ENSG00000042781|chr1:215758727-215758727|T/-|frameshift_variant	78.26377905018397	0.20980573808910843	6				NaN	NaN	0	NaN	11488	3862	15345
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15367	38.975	NaN	15821	30	0	1524.5	0.214	+			46194	VDWQIRQV	8	83	522.2848209037664	1042.5550888743328	2	522.2853393554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VDWQIRQV_	ENSG00000126522|ENST00000304874|ASL;nc|ENSG00000126522|P04424-2|ASL;nc|ENSG00000126522|P04424-3|ASL	95.81516180277367	0.2598660847282228	6				NaN	NaN	0	NaN	11500	3865	15366
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15368	38.978	NaN	12215	30	0	2117.3	0.106	+			32879	RDHLLRTA	8	79	491.28306860798443	980.5515842827689	2	491.2841491699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RDHLLRTA_	ENSG00000138434|ENST00000431877|ITPRID2;ENST00000440623.5_1_2:182756982-182781157:+|nuORF;nc|ENSG00000138434|P28290-2|ITPRID2;nc|ENSG00000138434|P28290-3|ITPRID2	66.42927471994793	0.4381325844043345	6				NaN	NaN	0	NaN	11501	3865	15366
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15369	38.98	NaN	11871	30	0	1341.8	0.106				-1	 	0	83	525.7989310834043	1049.5833092336086	2	525.8009643554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11502	3865	15366
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15370	38.982	NaN	11945	30	0	647.43	0.106	+			18544	ISMDLQLTNK	10	89	581.8085930904052	1161.6026332476104	2	581.8106689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ISMDLQLTNK_	ENSG00000100280|ENST00000357586|AP1B1;ENST00000472057.1_1_22:29727525-29736761:-|nuORF;nc|ENSG00000100280|Q10567-2|AP1B1;nc|ENSG00000100280|Q10567-3|AP1B1;nc|ENSG00000100280|Q10567-4|AP1B1	125.68205650279488	0.01930466848182481	6				NaN	NaN	0	NaN	11503	3865	15366
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15371	38.984	NaN	8721.1	30	0	1432.9	0.106				-1	 	0	54	431.75955456650865	861.5045561998173	2	431.76055908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11504	3865	15366
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15372	38.986	NaN	15534	30	0	1201.6	0.037			+	11184	FGVSCIFFTL	10	84	567.2876965728543	1132.5608402125085	2	567.2902221679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FGVSCIFFTL_	REV__ENSG00000086758|ENST00000262854|HUWE1;REV__ENST00000218328.12_1_X:53611240-53681066:-|nuORF;REV__HUWE1|p.R1657Mfs*13|1|0.21|ENSG00000086758|chrX:53585043-53585044|-/A|frameshift_variant;REV__nc|ENSG00000086758|Q7Z6Z7-2|HUWE1;REV__nc|ENSG00000086758|Q7Z6Z7-3|HUWE1	66.42927471994793	0.3073667423445326	6				NaN	NaN	0	NaN	11505	3865	15366
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15373	38.986	NaN	6078.8	30	0	427.21	0.141	+			11952	FVKGRCMLI	9	77	533.7990793626775	1065.583605792155	2	533.8008422851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FVKGRCMLI_	ENSG00000138375|ENST00000357276|SMARCAL1	65.80317337860623	0.1652391959156183	6				NaN	NaN	0	NaN	11506	3865	15366
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15391	39.026	NaN	37904	30	0	2999.5	0.215	+			46078	VCRSCLVKY	9	82	564.2883493270484	1126.5621457208968	2	564.2905883789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_VCRSC(Carbamidomethyl (C))LVKY_	ENST00000430644.5_1_4:728709-759864:+|nuORF;ENST00000440452.5_1_4:728709-759864:+|nuORF	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	11521	3868	15390
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15392	39.029	NaN	6503.2	30	0	1238.4	0.106				-1	 	0	71	493.79622042022805	985.5778879072561	2	493.7974853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11522	3868	15390
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15393	39.031	NaN	9102	30	0	1391.6	0.106	+			42081	SYFALQVGK	9	79	506.77455518363155	1011.5345574340631	2	506.77642822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SYFALQVGK_	ENSG00000085871|ENST00000265498|MGST2;ENST00000502587.1_1_4:140587164-140599797:+|nuORF;ENST00000515067.1_1_4:140587191-140608853:+|nuORF;MGST2|p.K103Nfs*8|2|0.22|ENSG00000085871|chr4:139703529-139703529|A/-|frameshift_variant;nc|ENSG00000085871|Q99735-2|MGST2	93.1432384553994	0.056003526918089595	6				NaN	NaN	0	NaN	11523	3868	15390
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15394	39.033	NaN	8397.9	30	0	2646.9	0.106	+			50201	WLTMHVLLP	9	76	555.312020200867	1108.6094874685339	2	555.31396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_WLTMHVLLP_	ENST00000502171.2_1_5:52405791-52405908:+|nuORF	40.5726180659479	0.4135428067754104	6				NaN	NaN	0	NaN	11524	3868	15390
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15395	39.035	NaN	5322	30	0	415.19	0.106	+			32031	QRPSQELLW	9	74	578.8092032859935	1155.6038536387869	2	578.8112182617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QRPSQELLW_	ENSG00000187796|ENST00000371732|CARD9;ENST00000485975.1_1_9:139264964-139265319:-|nuORF;nc|ENSG00000289701|Q9H257-2|CARD9;nc|ENSG00000289701|Q9H257-3|CARD9	42.396135135203025	0.392153681582562	6				NaN	NaN	0	NaN	11525	3868	15390
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15396	39.037	NaN	8343.5	30	0	742.28	0.036			+	28372	NELGEREKK	9	82	551.7963137672407	1101.5780746012813	2	551.7984619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NELGEREKK_	REV__ENSG00000170248|ENST00000307296|PDCD6IP;REV__nc|ENSG00000170248|Q8WUM4-2|PDCD6IP	90.36981228632155	0.0638227155548745	6				NaN	NaN	0	NaN	11526	3868	15390
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15397	39.037	NaN	4664.4	30	0	1493.2	0.142	+			45510	TYFGNLCPTQ	10	70	572.2589735475775	1142.503394161955	2	572.260986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TYFGNLCPTQ_	nc|ENSG00000166473|Q7Z442-3|PKD1L2;nc|ENSG00000166473|Q7Z442|PKD1L2	38.753607047826485	0.5606299674732264	6				NaN	NaN	0	NaN	11527	3868	15390
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15413	39.072	NaN	6796.2	30	0	1691.4	0.214				-1	 	0	63	457.27547114881224	912.5363893644245	2	457.2765197753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11540	3871	15412
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15414	39.076	NaN	4019	30	0	548.51	0.106				-1	MEQRCPLAY	9	73	584.2678123128331	1166.5210716924662	2	584.2698364257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_MEQRC(Carbamidomethyl (C))PLAY_	ENSG00000118496|ENST00000237281|FBXO30	57.81127852772723	0.2318599694398087	6				NaN	NaN	0	NaN	11541	3871	15412
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15415	39.078	NaN	4044.1	30	0	706.69	0.106			+	31825	QPQSRSEVFV	10	74	588.8041952824734	1175.5938376317467	2	588.8057861328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QPQSRSEVFV_	REV__ENST00000392627.5_1_17:72443273-72443525:+|nuORF	31.529811441608018	0.6223461015008678	6				NaN	NaN	0	NaN	11542	3871	15412
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15416	39.08	NaN	4026	30	0	792.36	0.106	+			25301	LPAIASSS	8	56	373.20987774270935	NaN	0	373.20977783203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LPAIASSS_	ENST00000524717.5_1_11:96075063-96075294:-|nuORF	37.028477286268924	1.7418937515398478	6				NaN	NaN	0	NaN	11543	3871	15412
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15417	39.082	NaN	3153.9	30	0	702.95	0.106			+	33638	RLYALEETF	9	73	571.2960599761357	1140.5775670190712	2	571.2982788085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RLYALEETF_	REV__CON__Q2M2I5;REV__ENSG00000167916|ENST00000264651|KRT24	42.396135135203025	0.392153681582562	6				NaN	NaN	0	NaN	11544	3871	15412
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15418	39.083	NaN	4837.3	30	0	416.62	0.035	+			26541	LTRRARVY	8	73	517.8144822262154	1033.6144115192308	2	517.8161010742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LTRRARVY_	ENSG00000165914|ENST00000328459|TTC7B;nc|ENSG00000165914|Q86TV6-2|TTC7B	37.15910966729921	0.6739408393984688	6				NaN	NaN	0	NaN	11545	3871	15412
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15419	39.084	NaN	9406.7	30	0	1552.3	0.139			+	7331	DAVGSRAAGLG	11	70	487.25728834617416	972.5000237591483	2	487.25885009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DAVGSRAAGLG_	REV__ENST00000565633.1_1_16:88729767-88737874:+|nuORF	41.42661286455405	0.5384226294179143	6				NaN	NaN	0	NaN	11546	3871	15412
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15434	39.117	NaN	20744	30	0	5818.1	0.214	+			27447	MLKRFARM	8	87	534.7939578260517	1067.5733627189034	2	534.7958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_MLKRFARM(Oxidation (M))_	ENSG00000162836|ENST00000583509|ACP6;ENST00000609196.5_1_1:147102847-147131108:-|nuORF	83.28718786952967	0.2977916691876266	6				NaN	NaN	0	NaN	11558	3874	15433
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15435	39.121	NaN	14394	30	0	2142.9	0.106	+			17797	IETTGTYQL	9	75	513.2600268320267	1024.5055007308533	2	513.2614135742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IETTGTYQL_	ENSG00000007171|ENST00000313735|NOS2;nc|ENSG00000007171|P35228-2|NOS2;NOS2|p.A650Pfs*53|1|0.21|ENSG00000007171|chr17:27769063-27769063|C/-|frameshift_variant;NOS2|p.Y709*|1|0.33|ENSG00000007171|chr17:27767745-27767745|G/-|frameshift_variant	98.58198989935565	0.04066992115528678	6				NaN	NaN	0	NaN	11559	3874	15433
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15436	39.123	NaN	17041	30	0	2256.6	0.106				-1	CFSARGCLS	9	70	500.7205225379372	999.4264921426744	2	500.721923828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_CFSARGC(Carbamidomethyl (C))LS_	ENST00000507917.5_1_4:44704555-44704834:-|nuORF	60.97194046774394	0.20551255781574032	6				NaN	NaN	0	NaN	11560	3874	15433
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15437	39.125	NaN	11007	30	0	1720.9	0.106				-1	 	0	75	478.7441909347949	955.4738289363899	2	478.7452087402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11561	3874	15433
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15438	39.127	NaN	7490.2	30	0	1551.6	0.106	+			35903	SEFKGDLETL	10	74	569.7829907971593	1137.5514286611185	2	569.7852172851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SEFKGDLETL_	CSDE1|p.D560Gfs*6|1|0.3|ENSG00000009307|chr1:114725295-114725296|-/C|frameshift_variant;CSDE1|p.V523Wfs*4|1|0.28|ENSG00000009307|chr1:114726284-114726284|C/-|frameshift_variant;ENSG00000009307|ENST00000358528|CSDE1;nc|ENSG00000009307|O75534-2|CSDE1;nc|ENSG00000009307|O75534-3|CSDE1;nc|ENSG00000009307|O75534-4|CSDE1	85.86182877749512	0.1547657473298402	6				NaN	NaN	0	NaN	11562	3874	15433
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15439	39.128	NaN	3863.5	30	0	606.9	0.037			+	2013	AKLQQCGIRT	10	59	373.20987774270935	NaN	0	373.2099304199219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_AKLQQCGIRT_	REV__ENSG00000143851|ENST00000691036|PTPN7;REV__ENST00000492977.5_1_1:202119404-202127449:-|nuORF;REV__nc|ENSG00000143851|P35236-2|PTPN7;REV__nc|ENSG00000143851|P35236-3|PTPN7	30.568863376406313	0.39980281766270914	6				NaN	NaN	0	NaN	11563	3874	15433
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15440	39.129	NaN	2371.8	30	0	226.16	0.138	+			46181	VDVSVPKL	8	58	428.7598083971343	855.5050638610686	2	428.760498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VDVSVPKL_	AHNAK|p.K2311Rfs*11|1|0.33|ENSG00000124942|chr11:62527487-62527487|G/-|frameshift_variant;AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;AHNAK|p.L2124Ifs*37|1|0.04|ENSG00000124942|chr11:62528048-62528049|-/ATGCCTGATA|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK	82.24051045832904	0.30490469762271794	6				NaN	NaN	0	NaN	11564	3874	15433
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15457	39.166	NaN	19531	30	0	1459.2	0.214	+			10580	EYIRSLNQF	9	91	585.2996155161334	1168.5846780990667	2	585.3004150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EYIRSLNQF_	ENSG00000141452|ENST00000269221|RMC1;ENST00000589215.5_1_18:21087981-21111645:+|nuORF;ENST00000591367.5_1_18:21109371-21111665:+|nuORF	180.86945649972546	0.001208757763874378	6				NaN	NaN	0	NaN	11578	3877	15456
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15458	39.169	NaN	7200.5	30	0	764.58	0.106			+	49930	VYVERQQDY	9	85	600.2882534851121	1198.5619540370242	2	600.2905883789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYVERQQDY_	REV__CEP55|p.D247Ifs*9|1|0.25|ENSG00000138180|chr10:93516987-93516987|A/-|frameshift_variant;REV__ENSG00000138180|ENST00000371485|CEP55;REV__nc|ENSG00000138180|Q53EZ4-2|CEP55	58.78195531508484	0.22376836668196862	6				NaN	NaN	0	NaN	11579	3877	15456
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15459	39.171	NaN	6557.2	30	0	691.1	0.106	+			25341	LPDTLKVTY	9	85	525.2972850581586	NaN	0	525.2974243164062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LPDTLKVTY_	ENSG00000160255|ENST00000652462|ITGB2;ENST00000475170.5_1_21:46306285-46313576:-|nuORF;ENST00000498666.5_1_21:46313282-46313576:-|nuORF	50.033510581677724	0.206462018841031	6				NaN	NaN	0	NaN	11580	3877	15456
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15460	39.173	NaN	4251.1	30	0	392.24	0.106				-1	 	0	68	509.2374314139957	1016.4603098947914	2	509.2391662597656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11581	3877	15456
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15461	39.175	NaN	4830.5	30	0	781.41	0.106	+			47227	VMIHFHLM	8	70	530.259704135395	1058.50485533759	2	530.2608642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Oxidation (M)	_VM(Oxidation (M))IHFHLM(Oxidation (M))_	nc|ENSG00000143190|P14859-3|POU2F1	43.626045697637714	0.6338121648150432	6				NaN	NaN	0	NaN	11582	3877	15456
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15462	39.177	NaN	4176.4	30	0	1143.8	0.037			+	41931	SVVPGRDKVQ	10	48	362.2086084138231	1083.6039958416693	3	362.20965576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SVVPGRDKVQ_	REV__ENSG00000164303|ENST00000296741|ENPP6;REV__ENST00000510054.1_1_4:185033764-185038938:-|nuORF	36.446750945000026	0.5818864909973037	6				NaN	NaN	0	NaN	11583	3877	15456
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15463	39.177	NaN	8185.9	30	0	910.98	0.145			+	37551	SLMFAQYHLQF	11	80	692.8392868364301	1383.6640207396601	2	692.8408203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SLMFAQYHLQF_	REV__ENSG00000100095|ENST00000248933|SEZ6L;REV__nc|ENSG00000100095|Q9BYH1-2|SEZ6L;REV__nc|ENSG00000100095|Q9BYH1-3|SEZ6L;REV__nc|ENSG00000100095|Q9BYH1-4|SEZ6L;REV__nc|ENSG00000100095|Q9BYH1-5|SEZ6L;REV__nc|ENSG00000100095|Q9BYH1-6|SEZ6L;REV__nc|ENSG00000100095|Q9BYH1-7|SEZ6L	48.601550744091256	0.44024757269956427	6				NaN	NaN	0	NaN	11584	3877	15456
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15476	39.207	NaN	12061	30	0	915.57	0.214	+			17848	IFNPVSKNF	9	78	533.2887477580723	1064.5629425829445	2	533.2901611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IFNPVSKNF_	ENST00000415561.1_1_2:179402212-179403504:+|nuORF;ENST00000419746.5_1_2:179402219-179403504:+|nuORF;ENST00000588244.5_1_2:179402120-179403504:+|nuORF;ENST00000589391.5_1_2:179401165-179403504:+|nuORF;ENST00000589434.5_1_2:179388144-179403504:+|nuORF	117.5257442709337	0.022697614825424036	6				NaN	NaN	0	NaN	11594	3880	15475
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15477	39.211	NaN	15779	30	0	2949.9	0.106	+			18689	ITAVTVNQSL	10	82	523.2959058386006	1044.577258744001	2	523.2979736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ITAVTVNQSL_	CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000425226.1_1_2:203706028-203706388:-|nuORF;ENST00000550170.5_1_12:53294858-53298765:-|nuORF;nc|ENSG00000170421|P05787-2|KRT8	154.0112374973812	0.007783311651969589	6				NaN	NaN	0	NaN	11595	3880	15475
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15478	39.213	NaN	8429	30	0	737.64	0.106	+			33857	RRHSQVNW	8	81	541.7835076787159	1081.5524624242316	2	541.7854614257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RRHSQVNW_	ENST00000367607.7_2_1:179924016-179959652:+|nuORF	52.29916861842294	0.578018602984656	6				NaN	NaN	0	NaN	11596	3880	15475
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15479	39.215	NaN	5062	30	0	953.98	0.106				-1	 	0	56	482.29584347256764	962.5771340119353	2	482.296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11597	3880	15475
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15480	39.216	NaN	3498.5	30	0	468.68	0.106			+	-1	HCMSAEANYYL	11	71	679.7769643620345	1357.539375790869	2	679.77880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_HC(Carbamidomethyl (C))MSAEANYYL_	REV__ENSG00000189320|ENST00000338588|FAM180A	31.529811441608018	0.6590691889962369	6				NaN	NaN	0	NaN	11598	3880	15475
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15481	39.218	NaN	2840.3	30	0	595.1	0.106	+			25894	LSGEMVRK	8	58	468.25282863628445	934.4911043393689	2	468.2542724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_LSGEM(Oxidation (M))VRK_	ENSG00000158864|ENST00000676972|NDUFS2;ENST00000478866.5_1_1:161172175-161179984:+|nuORF;nc|ENSG00000158864|O75306-2|NDUFS2;NDUFS2|p.D110N|1|0.27|ENSG00000158864|chr1:161206532-161206532|G/A|missense_variant;NDUFS2|p.I275Sfs*12|2|0.03|ENSG00000158864|chr1:161210345-161210346|-/TCCT|frameshift_variant;NDUFS2|p.I275Sfs*5|1|0.02|ENSG00000158864|chr1:161210346-161210347|-/GC|frameshift_variant	42.396135135203025	0.6414440140393314	6				NaN	NaN	0	NaN	11599	3880	15475
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15482	39.22	NaN	6800.8	30	0	974.25	0.034	+			2384	ANPLGLKNN	9	75	470.7645543076207	939.5145556820414	2	470.76605224609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ANPLGLKNN_	ENSG00000140545|ENST00000268150|MFGE8;ENST00000560937.1_1_15:89442628-89444976:-|nuORF;MFGE8|p.A307Pfs*66|1|0.25|ENSG00000140545|chr15:88899763-88899763|C/-|frameshift_variant;nc|ENSG00000140545|Q08431-2|MFGE8;nc|ENSG00000140545|Q08431-3|MFGE8;nc|ENSG00000140545|Q08431-4|MFGE8	30.503639358989545	0.5181749237905803	6				NaN	NaN	0	NaN	11600	3880	15475
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15496	39.25	NaN	23999	30	0	6994.6	0.214	+			27826	MSRILFCF	8	80	537.2673708066834	1072.5201886801667	2	537.269287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_MSRILFC(Carbamidomethyl (C))F_	ENST00000265734.8_1_7:92243010-92243112:-|nuORF	44.116797842482775	0.6307669463330267	6				NaN	NaN	0	NaN	11611	3883	15495
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15497	39.253	NaN	11287	30	0	1271.5	0.106				-1	 	0	79	519.283513508924	1036.5524740846479	2	519.285400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11612	3883	15495
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15498	39.255	NaN	24798	30	0	2838.2	0.106			+	49781	VYRAQRRL	8	84	531.3198805606747	1060.6252081881494	2	531.3216552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYRAQRRL_	REV__ENST00000461469.5_1_7:156619430-156685195:-|nuORF	52.29916861842294	0.578018602984656	6				NaN	NaN	0	NaN	11613	3883	15495
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15499	39.257	NaN	11411	30	0	1204.2	0.106	+			35181	SAIKENFQF	9	77	542.2772559894024	1082.5399590456047	2	542.2786254882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SAIKENFQF_	ENSG00000173193|ENST00000474629|PARP14;nc|ENSG00000173193|Q460N5-1|PARP14;nc|ENSG00000173193|Q460N5-3|PARP14;nc|ENSG00000173193|Q460N5-4|PARP14;PARP14|p.N1416Efs*19|1|0.2|ENSG00000173193|chr3:122718388-122718389|-/A|frameshift_variant	63.53385203322761	0.18415635464017938	6				NaN	NaN	0	NaN	11614	3883	15495
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15500	39.259	NaN	14210	30	0	1907.1	0.106				-1	 	0	68	470.6829593852973	939.3513658373946	2	470.6842956542969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11615	3883	15495
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15501	39.261	NaN	8341.6	30	0	883.99	0.106	+			22347	KTGPGTLA	8	69	372.71646689163646	743.4183808500729	2	372.7174072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KTGPGTLA_	ENST00000429962.1_1_22:21356738-21357321:+|nuORF;ENST00000436079.1_1_22:21356738-21363657:+|nuORF;ENST00000452284.1_1_22:21356738-21362956:+|nuORF	30.503639358989545	0.7238069182250283	6				NaN	NaN	0	NaN	11616	3883	15495
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15502	39.263	NaN	6893.2	30	0	861.55	0.036			+	11759	FSITLGDRF	9	77	528.2796145585934	1054.5446761839867	2	528.281494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FSITLGDRF_	REV__ENSG00000114374|ENST00000338981|USP9Y;REV__ENSG00000124486|ENST00000378308|USP9X;REV__ENST00000426564.6_1_Y:14821380-14953057:+|nuORF;REV__nc|ENSG00000114374|O00507-2|USP9Y;REV__nc|ENSG00000124486|Q93008-3|USP9X;REV__USP9X|p.F472Lfs*19|1|0.3|ENSG00000124486|chrX:41144620-41144620|T/-|frameshift_variant;REV__USP9X|p.K1773Nfs*9|1|0.28|ENSG00000124486|chrX:41214693-41214693|A/-|frameshift_variant;REV__USP9X|p.K2377*|1|0.88|ENSG00000124486|chrX:41229318-41229319|-/T|frameshift_variant;REV__USP9X|p.Y1953Mfs*7|1|0.72|ENSG00000124486|chrX:41216419-41216419|T/-|frameshift_variant;REV__USP9Y|p.F243Lfs*6|1|0.37|ENSG00000114374|chrY:12735677-12735677|T/-|frameshift_variant	65.15724298150197	0.17062369902793603	6				NaN	NaN	0	NaN	11617	3883	15495
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15517	39.294	NaN	12955	30	0	2768.9	0.214			+	-1	PMVRRISM	8	71	503.27049525520675	1004.5264375772135	2	503.27154541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_PMVRRISM(Oxidation (M))_	REV__ENSG00000109046|ENST00000262394|WSB1;REV__ENST00000467843.6_1_17:25636020-25639392:+|nuORF;REV__nc|ENSG00000109046|Q9Y6I7-2|WSB1;REV__nc|ENSG00000109046|Q9Y6I7-4|WSB1	40.5726180659479	0.6527593143185008	6				NaN	NaN	0	NaN	11629	3886	15516
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15518	39.298	NaN	16134	30	0	1154.5	0.106				-1	 	0	92	561.3119847701124	1120.6094166070247	2	561.3138427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11630	3886	15516
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15519	39.3	NaN	17514	30	0	5419.3	0.106			+	-1	KAEDSNEQCQV	11	79	654.2811683279886	1306.547783722777	2	654.2832641601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_KAEDSNEQC(Carbamidomethyl (C))QV_	REV__ENSG00000181827|ENST00000559447|RFX7;REV__nc|ENSG00000181827|Q2KHR2-1|RFX7;REV__nc|ENSG00000181827|Q2KHR2-2|RFX7;REV__RFX7|p.I1152*|2|0.36|ENSG00000181827|chr15:56093983-56093983|T/-|frameshift_variant;REV__RFX7|p.S919Afs*14|1|0.11|ENSG00000181827|chr15:56094683-56094683|G/-|frameshift_variant	33.921630207806714	0.6339809607503234	6				NaN	NaN	0	NaN	11631	3886	15516
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15520	39.302	NaN	5313.8	30	0	1124.4	0.106				-1	LTVLYFPI	8	51	336.5344378546052	NaN	0	336.5343017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LTVLYFPI_	ENST00000529626.2_2_11:93526850-93527054:+|nuORF	23.036711822280957	1.7418937515398478	6				NaN	NaN	0	NaN	11632	3886	15516
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15521	39.303	NaN	6529.1	30	0	1198.7	0.106				-1	 	0	60	442.28294623924126	882.5513395452825	2	442.28411865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11633	3886	15516
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15522	39.305	NaN	4817.3	30	0	508.83	0.035			+	27275	MFPSVVMSP	9	61	497.74091220725273	993.4672714813055	2	497.7424621582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MFPSVVMSP_	REV__NRG1|p.A467V|1|0.18|ENSG00000157168|chr8:32763879-32763879|C/T|missense_variant	42.396135135203025	0.392153681582562	6				NaN	NaN	0	NaN	11634	3886	15516
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15523	39.306	NaN	6974.4	30	0	609.19	0.141	+			11364	FLHFMLGW	8	84	533.7625204650247	1065.5104879968494	2	533.7642822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_FLHFM(Oxidation (M))LGW_	ENSG00000115850|ENST00000264162|LCT;LCT|p.G928Afs*16|1|0.18|ENSG00000115850|chr2:135809566-135809566|T/-|frameshift_variant;LCT|p.L1181Sfs*2|1|0.04|ENSG00000115850|chr2:135808805-135808806|-/GG|frameshift_variant;LCT|p.P1081Qfs*3|1|0.27|ENSG00000115850|chr2:135809105-135809105|G/-|frameshift_variant	43.626045697637714	0.6338121648150432	6				NaN	NaN	0	NaN	11635	3886	15516
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15541	39.341	NaN	14372	30	0	2170.9	0.214			+	7408	DEISVRGNK	9	73	509.27043263323475	1016.5263123332695	2	509.27197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DEISVRGNK_	REV__tr|U7STE4|U7STE4_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01028PE=4SV=1	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	11650	3889	15540
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15542	39.345	NaN	7083.1	30	0	651.6	0.106				-1	 	0	70	519.283513508924	1036.5524740846479	2	519.2852172851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11651	3889	15540
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15543	39.347	NaN	13134	30	0	4887.6	0.106	+			32644	QYVSAFSKL	9	82	521.7822873845317	NaN	0	521.7823486328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QYVSAFSKL_	ENSG00000165283|ENST00000356493|STOML2;nc|ENSG00000165283|Q9UJZ1-2|STOML2	63.42647028704847	0.13470499157941143	6				NaN	NaN	0	NaN	11652	3889	15540
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15544	39.349	NaN	12787	30	0	1511.7	0.106				-1	 	0	69	450.28046920621546	898.5463854792309	2	450.2815246582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11653	3889	15540
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15545	39.35	NaN	6374.6	30	0	505.04	0.106	+			13937	GRSKRASVL	9	66	487.2985767538653	972.5826005745306	2	487.2998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GRSKRASVL_	CTNNA3|p.E354Kfs*6|2|0.31|ENSG00000183230|chr10:66775513-66775513|T/-|frameshift_variant;CTNNA3|p.K856Nfs*3|1|0.09|ENSG00000183230|chr10:65920450-65920450|T/-|frameshift_variant;CTNNA3|p.P857Tfs*4|2|0.35|ENSG00000183230|chr10:65920449-65920450|-/T|frameshift_variant;ENSG00000183230|ENST00000433211|CTNNA3;nc|ENSG00000183230|Q9UI47-2|CTNNA3	46.45678178249821	0.34452392205506005	6				NaN	NaN	0	NaN	11654	3889	15540
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15546	39.352	NaN	4386.7	30	0	409.2	0.106	+			25682	LRGDKGRK	8	74	465.28538940993474	928.5562258866695	2	465.2866516113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LRGDKGRK_	ENST00000514415.1_1_12:54380126-54383028:+|nuORF	44.116797842482775	0.6307669463330267	6				NaN	NaN	0	NaN	11655	3889	15540
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15547	39.354	NaN	4670.3	30	0	446.8	0.037			+	10611	EYMDLMLPF	9	77	579.7646361434686	1157.514719353737	2	579.7666625976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EYMDLMLPF_	REV__ENSG00000101557|ENST00000261601|USP14;REV__nc|ENSG00000101557|P54578-2|USP14;REV__nc|ENSG00000101557|P54578-3|USP14	38.80614096846853	0.43426287593479557	6				NaN	NaN	0	NaN	11656	3889	15540
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15560	39.381	NaN	102130	30	0	17110	0.206			+	27876	MTKEMQATR	9	91	548.2675356233494	1094.5205183134988	2	548.269775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MTKEMQATR_	REV__CCDC102B|p.A85T|1|0.31|ENSG00000150636|chr18:68837016-68837016|G/A|missense_variant	125.81401957644128	0.01768009863045738	6				NaN	NaN	0	NaN	11666	3892	15559
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15561	39.385	NaN	18200	30	0	4726.4	0.106			+	47817	VSKKMENK	8	70	490.2660382937728	978.5175236543456	2	490.2674865722656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_VSKKM(Oxidation (M))ENK_	REV__ENSG00000141446|ENST00000269214|ESCO1;REV__nc|ENSG00000141446|Q5FWF5-2|ESCO1	44.116797842482775	0.6307669463330267	6				NaN	NaN	0	NaN	11667	3892	15559
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15562	39.387	NaN	7728.5	30	0	431.46	0.106				-1	MMMIMILLV	9	73	555.7949054400054	1109.5752579468108	2	555.7970581054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_MMMIM(Oxidation (M))ILLV_	nc|ENSG00000169490|Q9BX73-2|TM2D2	60.403631409065575	0.21025000616765316	6				NaN	NaN	0	NaN	11668	3892	15559
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15563	39.388	NaN	15280	30	0	2116.2	0.106	+			28581	NKKDVNLSK	9	82	523.3043327881726	1044.594112643145	2	522.806396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NKKDVNLSK_	ENSG00000197818|ENST00000361573|SLC9A8;nc|ENSG00000197818|Q9Y2E8-2|SLC9A8	75.04331003522576	0.118981335847003	6				NaN	NaN	0	NaN	11669	3892	15559
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15564	39.39	NaN	5696.5	30	0	979.35	0.106	+			619	ADVARGMDY	9	72	499.22446163683395	996.4343703404679	2	499.22607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ADVARGMDY_	ENSG00000120156|ENST00000380036|TEK;nc|ENSG00000120156|Q02763-2|TEK;nc|ENSG00000120156|Q02763-3|TEK	51.33545320467046	0.2872990594074956	6				NaN	NaN	0	NaN	11670	3892	15559
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15565	39.392	NaN	6726.6	30	0	945.13	0.106				-1	LGGRFQAPSG	10	71	516.2673751992651	1030.52019746533	2	516.2691040039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LGGRFQAPSG_	ENST00000399300.6_1_8:94746812-94746845:-|nuORF	42.396135135203025	0.5270658956260207	6				NaN	NaN	0	NaN	11671	3892	15559
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15566	39.394	NaN	3553.7	30	0	499.44	0.038			+	-1	NNHAEMRKLE	10	75	629.3032129431857	1256.5918729531713	2	629.30517578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_NNHAEM(Oxidation (M))RKLE_	REV__CEP63|p.D497Efs*14|1|0.02|ENSG00000182923|chr3:134558164-134558165|-/GATAAAGAATT|frameshift_variant;REV__ENSG00000182923|ENST00000675561|CEP63;REV__nc|ENSG00000182923|Q96MT8-2|CEP63;REV__nc|ENSG00000182923|Q96MT8-3|CEP63;REV__nc|ENSG00000182923|Q96MT8-4|CEP63	61.691277971877994	0.35045824941635534	6				NaN	NaN	0	NaN	11672	3892	15559
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15584	39.431	NaN	34739	30	0	8530.4	0.214				-1	 	0	85	513.2834631374781	1024.552373341756	2	513.2855834960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11687	3895	15583
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15585	39.435	NaN	13744	30	0	812.38	0.106	+			49684	VYKETCISF	9	95	545.2669655771303	1088.5193782210606	2	545.2682495117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYKETCISF_	ENSG00000127324|ENST00000247829|TSPAN8;ENST00000552128.2_1_12:71519116-71532942:-|nuORF	63.53385203322761	0.18415635464017938	6				NaN	NaN	0	NaN	11688	3895	15583
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15586	39.437	NaN	8892.9	30	0	617.61	0.106			+	30381	PVPIGSSLQN	10	80	506.2760507439592	1010.5375485547185	2	506.2795715332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PVPIGSSLQN_	REV__ENSG00000109689|ENST00000467087|STIM2;REV__ENST00000467011.5_1_4:27022655-27024615:+|nuORF;REV__nc|ENSG00000109689|Q9P246-2|STIM2;REV__STIM2|p.S735Lfs*9|1|0.08|ENSG00000109689|chr4:27022958-27022959|-/TGTA|frameshift_variant	52.936696900407355	0.4300801048568001	6				NaN	NaN	0	NaN	11689	3895	15583
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15587	39.439	NaN	17968	30	0	1905.8	0.106	+			17850	IFQNFLQQ	8	91	519.2744797253582	1036.5344065175163	2	519.2772216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IFQNFLQQ_	ENSG00000135148|ENST00000412615|TRAFD1	82.30502934623384	0.30436709589983096	6				NaN	NaN	0	NaN	11690	3895	15583
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15588	39.441	NaN	3128	30	0	240.79	0.106				-1	 	0	62	464.29586235706853	926.5771717809371	2	464.2969970703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11691	3895	15583
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15589	39.443	NaN	5953.4	30	0	920.5	0.037	+			42399	TAKCPVTVWL	10	56	373.20987774270935	NaN	0	373.2098693847656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TAKCPVTVWL_	ENST00000416708.1_1_7:46017982-46019554:+|nuORF	29.170058357718403	0.40439580130713204	6				NaN	NaN	0	NaN	11692	3895	15583
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15590	39.443	NaN	2324.3	30	0	474.49	0.144			+	-1	TYGPDCLCRGE	11	55	424.17792684379515	1269.5119511315854	3	424.1787414550781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_TYGPDCLC(Carbamidomethyl (C))RGE_	REV__ENSG00000168477|ENST00000644971|TNXB;REV__nc|ENSG00000168477|P22105-1|TNXB;REV__nc|ENSG00000168477|P22105-4|TNXB;REV__TNXB|p.E2100Sfs*2|1|0.21|ENSG00000168477|chr6:32067907-32067907|C/-|frameshift_variant;REV__TNXB|p.E2633Sfs*2|1|0.06|ENSG00000168477|chr6:32056832-32056832|C/-|frameshift_variant;REV__TNXB|p.G2152Afs*46|1|0.18|ENSG00000168477|chr6:32067750-32067750|C/-|frameshift_variant	22.561587123415745	0.7531385481947795	6				NaN	NaN	0	NaN	11693	3895	15583
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15605	39.477	NaN	66340	30	0	19862	0.214			+	12120	GAGAARPATY	10	89	467.7411768748999	933.4678008165998	2	467.74237060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GAGAARPATY_	REV__ENST00000477225.1_1_3:49161274-49161370:-|nuORF	40.77816245573522	0.5419747034533848	6				NaN	NaN	0	NaN	11705	3898	15604
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15606	39.48	NaN	21408	30	0	2118.6	0.106			+	28615	NKSKKESKP	9	86	523.3043327881726	1044.594112643145	2	523.3059692382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NKSKKESKP_	REV__ENSG00000163961|ENST00000318037|RNF168;REV__RNF168|p.T509Nfs*11|1|0.1|ENSG00000163961|chr3:196472011-196472012|-/G|frameshift_variant	35.15202426646627	0.4747332964206883	6				NaN	NaN	0	NaN	11706	3898	15604
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15607	39.482	NaN	13516	30	0	1478.5	0.106				-1	CAIVGNVLVI	10	88	529.3058649145901	1056.59717689598	2	529.3075561523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_C(Carbamidomethyl (C))AIVGNVLVI_	ENSG00000121933|ENST00000369716|TMIGD3;ENSG00000282608|ENST00000241356|ADORA3	63.30626980617807	0.33577009411590547	6				NaN	NaN	0	NaN	11707	3898	15604
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15608	39.484	NaN	15853	30	0	1783.3	0.106	+			15867	GYIERPQLI	9	90	544.8076696963528	1087.6007864595056	2	544.80908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GYIERPQLI_	ENSG00000164329|ENST00000453514|TENT2;nc|ENSG00000164329|Q6PIY7-2|TENT2	81.52500206392136	0.09095445986635249	6				NaN	NaN	0	NaN	11708	3898	15604
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15609	39.486	NaN	3809	30	0	308.95	0.106	+			24348	LFLRGVGCF	9	73	506.2760507439592	1010.5375485547185	2	506.2786865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LFLRGVGCF_	ENST00000266673.9_1_12:72080587-72083430:+|nuORF	57.81127852772723	0.2318599694398087	6				NaN	NaN	0	NaN	11709	3898	15604
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15610	39.488	NaN	7909.1	30	0	616.34	0.036				-1	CAAAREGRLE	10	75	559.2737689336803	1116.5329849341606	2	559.27587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))CAAAREGRLE_	ENSG00000159387|ENST00000290552|IRX6;IRX6|p.R306C|1|0.39|ENSG00000159387|chr16:55328894-55328894|C/T|missense_variant	56.43379154798735	0.3982744522255666	6				NaN	NaN	0	NaN	11710	3898	15604
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15611	39.488	NaN	2410	30	0	401.67	0.144			+	37831	SNALSVQLPV	10	54	343.19766570240824	NaN	0	343.1974182128906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SNALSVQLPV_	REV__ENSG00000268964|ENST00000601417|ERVV-2;REV__ENSG00000269526|ENST00000602168|ERVV-1	31.634271133179894	0.39630454568332174	6				NaN	NaN	0	NaN	11711	3898	15604
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15625	39.52	NaN	26620	30	0	5600.9	0.214				-1	VMIHFHLM	8	96	530.259704135395	1058.50485533759	2	530.2612915039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_VM(Oxidation (M))IHFHLM(Oxidation (M))_	nc|ENSG00000143190|P14859-3|POU2F1	43.626045697637714	0.6338121648150432	6				NaN	NaN	0	NaN	11722	3901	15624
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15626	39.523	NaN	20452	30	0	2355.6	0.106			+	-1	KELSLLTEM	9	85	540.2872298080014	1078.5599066828026	2	540.2905883789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_KELSLLTEM(Oxidation (M))_	REV__ENST00000490962.1_1_3:72926935-72927124:-|nuORF	74.25504064058377	0.12238981753128622	6				NaN	NaN	0	NaN	11723	3901	15624
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15627	39.525	NaN	9623.9	30	0	1334.7	0.106	+			15657	GVLSDINLK	9	69	479.7804685021661	957.5463840711323	2	479.7818603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GVLSDINLK_	ENSG00000173848|ENST00000355029|NET1;ENST00000484741.1_1_10:5496419-5498268:+|nuORF;nc|ENSG00000173848|Q7Z628-2|NET1;NET1|p.I346M|1|0.08|ENSG00000173848|chr10:5454959-5454959|A/G|missense_variant	77.31757898189308	0.1091473830098891	6				NaN	NaN	0	NaN	11724	3901	15624
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15628	39.527	NaN	9376.2	30	0	865.67	0.106			+	51522	YVTDLILCME	10	80	600.2882534851121	1198.5619540370242	2	600.2908935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YVTDLILCME_	REV__ENST00000475777.2_1_12:110882884-110883061:-|nuORF	63.30626980617807	0.33577009411590547	6				NaN	NaN	0	NaN	11725	3901	15624
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15629	39.529	NaN	9520	30	0	974.94	0.106				-1	TTICCFLCSC	10	75	604.2343885100715	1206.454224086943	2	604.2359619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C)	_TTIC(Carbamidomethyl (C))CFLC(Carbamidomethyl (C))SC_	ENSG00000198892|ENST00000362011|SHISA4;ENST00000464117.1_1_1:201857869-201860971:+|nuORF	34.172542307311794	0.6007644933930345	6				NaN	NaN	0	NaN	11726	3901	15624
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15630	39.531	NaN	10070	30	0	1208.6	0.037			+	18198	IMLVIFTEF	9	79	564.8047025520716	1127.594852170943	2	564.8065795898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_IM(Oxidation (M))LVIFTEF_	REV__SCN3A|p.F1214L|1|0.33|ENSG00000153253|chr2:165113843-165113843|G/T|missense_variant	40.5726180659479	0.4135428067754104	6				NaN	NaN	0	NaN	11727	3901	15624
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15631	39.531	NaN	8736.5	30	0	1230.4	0.141			+	51388	YTMKLHKF	8	81	534.2897492922348	1066.5649456512695	2	534.29150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YTMKLHKF_	REV__AGO4|p.E724Kfs*16|1|0.24|ENSG00000134698|chr1:35841744-35841745|AG/-|frameshift_variant;REV__ENSG00000134698|ENST00000373210|AGO4	52.29916861842294	0.578018602984656	6				NaN	NaN	0	NaN	11728	3901	15624
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15648	39.568	NaN	52145	30	0	4638	0.214			+	44809	TTRIFCMGK	9	89	528.770234032034	1055.5259151308678	2	528.7720947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TTRIFCMGK_	REV__ENSG00000007350|ENST00000369915|TKTL1;REV__nc|ENSG00000007350|P51854-1|TKTL1;REV__nc|ENSG00000007350|P51854-4|TKTL1	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	11742	3904	15647
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15649	39.572	NaN	17154	30	0	1802.7	0.106			+	11393	FLNQQEPQI	9	84	558.7882275626108	NaN	0	558.7886352539062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FLNQQEPQI_	REV__nc|ENSG00000142163|Q8WZA6|OR1E3	66.42927471994793	0.121898005645852	6				NaN	NaN	0	NaN	11743	3904	15647
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15650	39.574	NaN	6379.3	30	0	1374	0.106				-1	 	0	60	450.26768671914306	898.5208205050861	2	450.2689208984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11744	3904	15647
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15651	39.576	NaN	7036.2	30	0	1904	0.106				-1	 	0	68	429.2282396999614	856.4419264667229	2	429.2294006347656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11745	3904	15647
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15652	39.578	NaN	6570.9	30	0	1245.6	0.106	+			11619	FPVSCRIVF	9	70	534.2897492922348	1066.5649456512695	2	534.2922973632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FPVSCRIVF_	ENST00000354371.6_1_2:238006612-238006942:+|nuORF	45.9519527083369	0.35044536499095585	6				NaN	NaN	0	NaN	11746	3904	15647
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15653	39.579	NaN	2630	30	0	370.77	0.034			+	46040	VCAPRRLI	8	59	464.28223754723007	926.5499221612602	2	464.28399658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VCAPRRLI_	REV__ENSG00000212657|ENST00000391352|KRTAP16-1	60.29395666154354	0.49887135096048313	6				NaN	NaN	0	NaN	11747	3904	15647
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15654	39.58	NaN	5740	30	0	1019	0.138				-1	 	0	57	440.20211857546013	878.3896842177203	2	440.20330810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11748	3904	15647
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15665	39.607	NaN	15060	30	0	3941.3	0.214	+			27827	MSRILFCF	8	74	537.2673708066834	1072.5201886801667	2	537.2694091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_MSRILFC(Carbamidomethyl (C))F_	ENST00000265734.8_1_7:92243010-92243112:-|nuORF	42.396135135203025	0.6414440140393314	6				NaN	NaN	0	NaN	11756	3907	15664
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15666	39.611	NaN	10837	30	0	647.24	0.106	+			37983	SPIDVVEKY	9	82	525.278415821598	1048.5422787099958	2	525.2797241210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SPIDVVEKY_	ENSG00000117153|ENST00000367261|KLHL12;nc|ENSG00000117153|Q53G59-2|KLHL12	76.16968421966216	0.11411088698345859	6				NaN	NaN	0	NaN	11757	3907	15664
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15667	39.613	NaN	3777.1	30	0	520.42	0.106	+			37902	SPAQCIPAI	9	58	478.7481105765736	955.4816682199472	2	478.7486877441406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SPAQC(Carbamidomethyl (C))IPAI_	ENST00000315293.6_2_9:67019055-67031582:-|nuORF	79.45101966838831	0.09992237243120712	6				NaN	NaN	0	NaN	11758	3907	15664
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15668	39.614	NaN	5412.6	30	0	948.17	0.106	+			47218	VMFSSCLRCV	10	75	572.76910798894	1143.52366304468	2	572.7715454101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VMFSSCLRCV_	ENSG00000132357|ENST00000254691|CARD6	31.529811441608018	0.6223461015008678	6				NaN	NaN	0	NaN	11759	3907	15664
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15669	39.616	NaN	3032.9	30	0	416.94	0.106				-1	 	0	43	349.2637289801296	696.5129050270592	2	349.2646789550781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11760	3907	15664
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15670	39.618	NaN	4637.5	30	0	499.93	0.106	+			25458	LPQIQPNLTN	10	69	569.3145106287516	1136.614468324303	2	569.317138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LPQIQPNLTN_	ENSG00000189308|ENST00000340417|LIN54;nc|ENSG00000189308|Q6MZP7-2|LIN54;nc|ENSG00000189308|Q6MZP7-3|LIN54;nc|ENSG00000189308|Q6MZP7-4|LIN54	42.33807565288922	0.5276008846745733	6				NaN	NaN	0	NaN	11761	3907	15664
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15671	39.62	NaN	6796.5	30	0	1922.5	0.037	+			14183	GSRGRKNSRT	10	64	373.542814922387	1117.606615367361	3	373.544189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GSRGRKNSRT_	ENSG00000087157|ENST00000262764|PGS1;nc|ENSG00000087157|Q32NB8-2|PGS1;nc|ENSG00000087157|Q32NB8-3|PGS1;PGS1|p.V424Wfs*60|1|0.42|ENSG00000087157|chr17:78403953-78403953|G/-|frameshift_variant	36.446750945000026	0.5818864909973037	6				NaN	NaN	0	NaN	11762	3907	15664
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15685	39.65	NaN	36933	30	0	5201.4	0.214			+	24714	LHLARLCAM	9	85	522.2782668173124	1042.5419807014248	2	522.2799072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LHLARLCAM(Oxidation (M))_	REV__ENST00000519868.1_1_5:169507757-169507874:+|nuORF	50.0245360154114	0.3026755932229825	6				NaN	NaN	0	NaN	11773	3910	15684
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15686	39.653	NaN	5960.4	30	0	1105.2	0.106			+	51025	YKKEKIQA	8	58	336.5344378546052	NaN	0	336.5341491699219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YKKEKIQA_	REV__tr|U7SEQ5|U7SEQ5_FUSNUAAA-ATPase-likedomain-containingprotein(Fragment)OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02320PE=4SV=1	30.503639358989545	1.7418937515398478	6				NaN	NaN	0	NaN	11774	3910	15684
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15687	39.655	NaN	10473	30	0	839.41	0.106	+			26612	LTYNDFINK	9	83	564.2905802090445	NaN	0	564.2906494140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LTYNDFINK_	ENSG00000077097|ENST00000264331|TOP2B;ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000077097|Q02880-2|TOP2B;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A;TOP2A|p.K1199Efs*11|1|0.23|ENSG00000131747|chr17:40396408-40396409|-/C|frameshift_variant;TOP2A|p.T1205Hfs*19|4|0.35|ENSG00000131747|chr17:40396390-40396390|T/-|frameshift_variant;TOP2B|p.S1441Kfs*20|1|0.32|ENSG00000077097|chr3:25606099-25606100|-/T|frameshift_variant;TOP2B|p.S1441Vfs*41|4|0.13|ENSG00000077097|chr3:25606100-25606100|T/-|frameshift_variant;TOP2B|p.S1476Ffs*11|2|0.3|ENSG00000077097|chr3:25604822-25604823|-/A|frameshift_variant	115.49404669440601	0.004735551190337385	6				NaN	NaN	0	NaN	11775	3910	15684
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15688	39.657	NaN	5479.5	30	0	2462.9	0.106			+	20676	KGNLQEILEL	10	74	578.8308556420111	1155.647158350822	2	578.8323364257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KGNLQEILEL_	REV__tr|U7T652|U7T652_FUSNUHelicaseC-terminaldomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00108PE=4SV=1	45.97224482568171	0.49411383603842696	6				NaN	NaN	0	NaN	11776	3910	15684
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15689	39.659	NaN	2937	30	0	287.46	0.106	+			11254	FILPSQPGL	9	63	486.2815170487019	970.5484811642038	2	486.27960205078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FILPSQPGL_	ENSG00000116133|ENST00000371269|DHCR24;nc|ENSG00000116133|Q15392-2|DHCR24	58.78195531508484	0.22376836668196862	6				NaN	NaN	0	NaN	11777	3910	15684
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15690	39.661	NaN	4292	30	0	366.55	0.036	+			49625	VYHQLCRAL	9	74	551.7928310745688	1101.5711092159374	2	551.794189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VYHQLCRAL_	sp|F5HC79|TRM1_HCMVMTripartiteterminasesubunit1OS=Humancytomegalovirus(strainMerlin)OX=295027GN=TRM1PE=3SV=1;sp|P16724|TRM1_HCMVATripartiteterminasesubunit1OS=Humancytomegalovirus(strainAD169)OX=10360GN=TRM1PE=3SV=1	40.5726180659479	0.4135428067754104	6				NaN	NaN	0	NaN	11778	3910	15684
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15691	39.661	NaN	3164.2	30	0	459.04	0.14	+			43912	TNVKRGVL	8	57	443.77777816065236	885.5410033881047	2	443.77862548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TNVKRGVL_	ENSG00000163697|ENST00000508593|APBB2;ENST00000502687.1_1_4:40818111-40824073:-|nuORF;nc|ENSG00000163697|Q92870-2|APBB2;nc|ENSG00000163697|Q92870-3|APBB2;nc|ENSG00000163697|Q92870|APBB2	26.79610172149135	0.7524337208463756	6				NaN	NaN	0	NaN	11779	3910	15684
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15706	39.694	NaN	90198	30	0	11723	0.214			+	32023	QRMRQSSQK	9	97	574.801191031922	1147.587829130644	2	574.8032836914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QRMRQSSQK_	REV__ENSG00000114107|ENST00000264982|CEP70;REV__ENST00000478673.5_1_3:138250446-138291769:-|nuORF;REV__nc|ENSG00000114107|Q8NHQ1-2|CEP70;REV__nc|ENSG00000114107|Q8NHQ1-3|CEP70;REV__nc|ENSG00000114107|Q8NHQ1-4|CEP70;REV__nc|ENSG00000114107|Q8NHQ1-5|CEP70	90.77665401227738	0.06267569666681755	6				NaN	NaN	0	NaN	11791	3913	15705
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15707	39.697	NaN	31913	30	0	4280.2	0.106			+	6879	CLLATWRL	8	81	488.2756146047264	974.5366762762528	2	488.2770080566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_CLLATWRL_	REV__ENSG00000197496|ENST00000359271|SLC2A10	88.64286706044652	0.2815785716369046	6				NaN	NaN	0	NaN	11792	3913	15705
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15708	39.699	NaN	18452	30	0	2272.8	0.106	+			49502	VWAAVPGKTF	10	75	538.2999502582882	1074.5853475833762	2	538.30078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VWAAVPGKTF_	CON__P02584;ENSG00000108518|ENST00000225655|PFN1	109.43880257439609	0.049666173740610824	6				NaN	NaN	0	NaN	11793	3913	15705
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15709	39.701	NaN	16603	30	0	4741.3	0.106				-1	 	0	62	433.75145720959785	865.4883614859957	2	433.7525634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11794	3913	15705
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15710	39.703	NaN	6742.3	30	0	1271.6	0.106	+			26428	LTGHRHRA	8	66	474.26779517595685	946.5210374187137	2	474.2685852050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LTGHRHRA_	ENST00000358157.2_1_9:91616444-91616663:+|nuORF	40.5726180659479	0.6527593143185008	6				NaN	NaN	0	NaN	11795	3913	15705
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15711	39.705	NaN	6061.6	30	0	852.27	0.035	+			51539	YWVPRNAL	8	68	509.7749305501297	1017.5353081670594	2	509.77703857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YWVPRNAL_	ENSG00000204257|ENST00000374843|HLA-DMA;ENST00000477541.1_1_6:32916643-32917850:-|nuORF;nc|ENSG00000204257|P28067|HLA-DMA	35.200714571348534	0.6875396545722289	6				NaN	NaN	0	NaN	11796	3913	15705
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15712	39.706	NaN	9512.2	30	0	683.19	0.142			+	25372	LPGRTGSAEQF	11	77	581.7967615308957	1161.5789701285912	2	581.7985229492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LPGRTGSAEQF_	REV__ENSG00000136114|ENST00000258613|THSD1;REV__nc|ENSG00000136114|Q9NS62-2|THSD1	59.93077597824379	0.32407304095777845	6				NaN	NaN	0	NaN	11797	3913	15705
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15730	39.745	NaN	13929	30	0	1284.3	0.214			+	30438	PYLVHRRN	8	73	527.7985298459664	1053.5825067587327	2	527.8003540039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PYLVHRRN_	REV__ENSG00000188624|ENST00000341415|IGFL3	55.50420428727701	0.5462892107279674	6				NaN	NaN	0	NaN	11812	3916	15729
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15731	39.748	NaN	28079	30	0	8176.3	0.106			+	-1	NMEEEEMNG	9	78	549.6900454927321	1097.3655380522641	2	549.6921997070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_NM(Oxidation (M))EEEEMNG_	REV__ENSG00000178665|ENST00000429591|ZNF713;REV__ENST00000466630.5_1_7:55980329-55991094:+|nuORF;REV__ENST00000482436.1_1_7:55980329-55991886:+|nuORF	21.9598887501803	0.5980208138527809	6				NaN	NaN	0	NaN	11813	3916	15729
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15732	39.751	NaN	22149	30	0	3051.6	0.106	+			46516	VEVSIPAKL	9	77	478.2945941933226	954.5746354534452	2	478.29461669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VEVSIPAKL_	ENSG00000115677|ENST00000310931|HDLBP;ENST00000487169.5_1_2:242174673-242189369:-|nuORF;nc|ENSG00000115677|Q00341-2|HDLBP	104.0567914643314	0.03506238181059741	6				NaN	NaN	0	NaN	11814	3916	15729
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15733	39.752	NaN	7479.7	30	0	2524.6	0.106				-1	 	0	44	339.21980771078194	676.4250624883639	2	339.22076416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11815	3916	15729
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15734	39.754	NaN	6801.8	30	0	864.68	0.106				-1	 	0	73	507.7468296131936	1013.4791062931872	2	507.74810791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11816	3916	15729
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15735	39.756	NaN	4054.9	30	0	609.03	0.035			+	2266	ALVSDLRSF	9	61	504.27798014991214	1006.5414073666243	2	504.2794494628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ALVSDLRSF_	REV__ENST00000512003.7_1_5:109760554-109954135:-|nuORF	66.42927471994793	0.16001998865088202	6				NaN	NaN	0	NaN	11817	3916	15729
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15736	39.757	NaN	7658	30	0	488.04	0.14	+			50066	WFPAAINLV	9	81	515.7893981956834	1029.5642434581666	2	515.792236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_WFPAAINLV_	ENSG00000009694|ENST00000371130|TENM1;nc|ENSG00000009694|Q9UKZ4-2|TENM1;TENM1|p.L1382Ffs*3|1|0.63|ENSG00000009694|chrX:124422576-124422577|-/A|frameshift_variant;TENM1|p.M1863Wfs*25|1|0.38|ENSG00000009694|chrX:124392132-124392132|T/-|frameshift_variant;TENM1|p.P1166Qfs*6|1|0.82|ENSG00000009694|chrX:124497214-124497214|G/-|frameshift_variant	57.81127852772723	0.2318599694398087	6				NaN	NaN	0	NaN	11818	3916	15729
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15751	39.79	NaN	70325	30	0	8591.3	0.214	+			39805	STLDIVLANK	10	103	537.3138646732934	NaN	0	537.313720703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STLDIVLANK_	ENSG00000167325|ENST00000300738|RRM1	176.59839592901017	1.2077016721276324E-06	6				NaN	NaN	0	NaN	11830	3919	15750
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15752	39.793	NaN	37426	30	0	5122.6	0.106				-1	NPGDKPMTQ	9	85	502.22984885336075	1002.4451447735215	2	502.2309875488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_NPGDKPM(Oxidation (M))TQ_	ENSG00000174132|ENST00000312637|FAM174A	82.24051045832904	0.08786059719216216	6				NaN	NaN	0	NaN	11831	3919	15750
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15753	39.795	NaN	16973	30	0	1595.2	0.106	+			17674	IEKLAVEAL	9	86	493.29858653457745	984.5826201359549	2	493.2996826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IEKLAVEAL_	ENSG00000166165|ENST00000348956|CKB	162.63603312974413	0.004023911058767669	6				NaN	NaN	0	NaN	11832	3919	15750
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15754	39.797	NaN	14963	30	0	1414	0.106				-1	 	0	89	514.7544878339045	1027.4944227346089	2	514.7559204101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11833	3919	15750
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15755	39.799	NaN	9293.9	30	0	698.44	0.106	+			29289	NYIRITSEI	9	77	554.8021937490967	1107.5898345649932	2	554.8037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NYIRITSEI_	ENSG00000089876|ENST00000284690|DHX32;nc|ENSG00000089876|Q7L7V1-2|DHX32	117.81106730687013	0.02252488733980868	6				NaN	NaN	0	NaN	11834	3919	15750
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15756	39.801	NaN	9029.4	30	0	1316.8	0.033			+	7406	DEIIAGDE	8	56	431.1980547424526	NaN	0	431.1980285644531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DEIIAGDE_	REV__tr|U7SJ39|U7SJ39_FUSNUAcyl-[acyl-carrier-protein]--UDP-N-acetylglucosamineO-acyltransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=lpxAPE=3SV=1	60.29395666154354	1.7418937515398478	6				NaN	NaN	0	NaN	11835	3919	15750
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15757	39.801	NaN	10053	30	0	2037.6	0.139	+			7253	DALRRLRA	8	69	485.79896160761916	969.5833702820383	2	485.79998779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DALRRLRA_	ENST00000585386.1_1_19:46145287-46148597:-|nuORF;nc|ENSG00000125746|O95834-2|EML2;nc|ENSG00000125746|O95834-3|EML2	47.91560031466742	0.6071945918984287	6				NaN	NaN	0	NaN	11836	3919	15750
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15769	39.829	NaN	76054	30	0	7517	0.166	+			40071	STNNWVLIK	9	99	537.8010353341081	NaN	0	537.8017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STNNWVLIK_	ENSG00000065000|ENST00000643116|AP3D1;nc|ENSG00000065000|O14617-4|AP3D1;nc|ENSG00000065000|O14617|AP3D1	96.0336014099291	0.029433397039169355	6				NaN	NaN	0	NaN	11845	3922	15768
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15770	39.832	NaN	26137	30	0	6901	0.106				-1	KIEEFEKLM	9	80	591.807350315183	1181.600147697166	2	591.8113403320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_KIEEFEKLM(Oxidation (M))_	CHD7|p.D2988Mfs*3|5|0.36|ENSG00000171316|chr8:60865895-60865895|G/-|frameshift_variant;CHD7|p.G2228Lfs*52|1|0.03|ENSG00000171316|chr8:60853406-60853407|-/TTGCCTTC|frameshift_variant;CHD7|p.L1020*|1|0.09|ENSG00000171316|chr8:60822599-60822599|T/-|frameshift_variant;CHD7|p.N2588Ifs*4|1|0.14|ENSG00000171316|chr8:60861054-60861054|A/-|frameshift_variant;ENSG00000171316|ENST00000423902|CHD7;nc|ENSG00000171316|Q9P2D1-2|CHD7	77.31757898189308	0.1091473830098891	6				NaN	NaN	0	NaN	11846	3922	15768
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15771	39.834	NaN	10155	30	0	1935.6	0.106	+			30613	QARIEIESF	9	80	546.7861704376459	1091.5577879420916	2	546.7886352539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QARIEIESF_	ENSG00000044574|ENST00000324460|HSPA5;HSPA5|p.N522Ifs*12|1|0.36|ENSG00000044574|chr9:125236992-125236992|T/-|frameshift_variant	106.68306549817024	0.032382560583716295	6				NaN	NaN	0	NaN	11847	3922	15768
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15772	39.836	NaN	15334	30	0	1846	0.106				-1	LSGCWTRTF	9	82	564.2701187304965	1126.525684527793	2	564.2723388671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_LSGC(Carbamidomethyl (C))WTRTF_	ENST00000565678.5_2_16:2314685-2317264:-|nuORF	56.72105179125745	0.24094814563026265	6				NaN	NaN	0	NaN	11848	3922	15768
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15773	39.838	NaN	16143	30	0	2686.4	0.106			+	27405	MKRSKMPNK	9	87	560.3101723166208	1118.6057917000414	2	560.3120727539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MKRSKMPNK_	REV__ENST00000266069.4_1_20:61572861-61572942:+|nuORF	56.72105179125745	0.24094814563026265	6				NaN	NaN	0	NaN	11849	3922	15768
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15774	39.84	NaN	8682.7	30	0	702.26	0.106	+			6813	CGTMRKETW	9	81	556.255241431986	1110.4959299307718	2	556.257080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_CGTMRKETW_	ENST00000486482.1_1_19:10222066-10222294:+|nuORF	82.24051045832904	0.08786059719216216	6				NaN	NaN	0	NaN	11850	3922	15768
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15775	39.841	NaN	5424.5	30	0	697.39	0.034	+			48331	VTGDWKVM	8	71	468.23897529764696	NaN	0	468.2371826171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VTGDWKVM_	ENSG00000023228|ENST00000233190|NDUFS1;nc|ENSG00000023228|P28331-2|NDUFS1;nc|ENSG00000023228|P28331-3|NDUFS1;nc|ENSG00000023228|P28331-4|NDUFS1;nc|ENSG00000023228|P28331-5|NDUFS1	45.9519527083369	1.7418937515398478	6				NaN	NaN	0	NaN	11851	3922	15768
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15792	39.876	NaN	22845	30	0	5305.9	0.214			+	27497	MMKEILVRM	9	84	591.807350315183	1181.600147697166	2	591.8106079101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_M(Oxidation (M))MKEILVRM(Oxidation (M))_	REV__ENSG00000117280|ENST00000367139|RAB29;REV__ENST00000468887.1_1_1:205739472-205744529:-|nuORF;REV__nc|ENSG00000117280|O14966-2|RAB29;REV__nc|ENSG00000117280|O14966-3|RAB29	71.87747018426188	0.13267044672804276	6				NaN	NaN	0	NaN	11865	3925	15791
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15793	39.88	NaN	15109	30	0	4773.1	0.106				-1	 	0	71	530.259704135395	1058.50485533759	2	530.2616577148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11866	3925	15791
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15794	39.882	NaN	10036	30	0	1028.9	0.106			+	-1	MLLSKMMR	8	75	513.2690251740029	1024.5234974148057	2	513.2708129882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))LLSKMMR_	REV__CYLC1|p.K424Rfs*69|2|0.17|ENSG00000183035|chrX:83873973-83873973|A/-|frameshift_variant	35.61828744233558	0.6843154725607303	6				NaN	NaN	0	NaN	11867	3925	15791
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15795	39.884	NaN	6300	30	0	499.32	0.106			+	-1	LNRFVMPCY	9	83	600.2882534851121	1198.5619540370242	2	600.2899169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_LNRFVMPC(Carbamidomethyl (C))Y_	REV__ENSG00000150867|ENST00000376573|PIP4K2A;REV__ENSG00000276293|ENST00000619039|PIP4K2B;REV__ENST00000422321.5_1_10:22856588-22898637:-|nuORF;REV__ENST00000432610.1_1_10:22896825-22898637:-|nuORF;REV__nc|ENSG00000150867|P48426-2|PIP4K2A;REV__nc|ENSG00000276293|P78356-2|PIP4K2B;REV__PIP4K2A|p.K261Rfs*9|1|0.06|ENSG00000150867|chr10:22550669-22550669|T/-|frameshift_variant;REV__PIP4K2A|p.R141Dfs*19|1|0.27|ENSG00000150867|chr10:22591700-22591700|T/-|frameshift_variant	42.47446043378293	0.39123495718708534	6				NaN	NaN	0	NaN	11868	3925	15791
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15796	39.886	NaN	3364.9	30	0	419.96	0.106				-1	 	0	62	467.7411768748999	933.4678008165998	2	467.7430725097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11869	3925	15791
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15797	39.887	NaN	2904.4	30	0	418.52	0.038				-1	CVCEPGWSGPR	11	65	624.268332950643	1246.5221129680858	2	624.2703247070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_CVC(Carbamidomethyl (C))EPGWSGPR_	ENSG00000074181|ENST00000263388|NOTCH3;NOTCH3|p.C1344Vfs*76|1|0.14|ENSG00000074181|chr19:15177899-15177899|G/-|frameshift_variant	29.170058357718403	0.683821074385409	6				NaN	NaN	0	NaN	11870	3925	15791
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15798	39.888	NaN	1859.4	30	0	133.54	0.139				-1	 	0	55	347.19776234012545	692.3809717470509	2	347.1986389160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11871	3925	15791
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15812	39.919	NaN	36029	30	0	9466.1	0.214				-1	 	0	58	440.20211857546013	878.3896842177203	2	440.2032470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11882	3928	15811
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15813	39.923	NaN	39630	30	0	3688.9	0.106	+			16785	HPALSNRAAL	10	90	525.2961925590303	1048.5778321848604	2	525.2979125976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HPALSNRAAL_	ENST00000469556.1_1_1:24122614-24123094:-|nuORF	47.657333605630114	0.47858658696240314	6				NaN	NaN	0	NaN	11883	3928	15811
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15814	39.925	NaN	18590	30	0	3359.5	0.106	+			26086	LSMLSDLQIY	10	81	591.807350315183	1181.600147697166	2	591.3013916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSMLSDLQIY_	ENSG00000158290|ENST00000371322|CUL4B;nc|ENSG00000158290|Q13620-3|CUL4B;nc|ENSG00000158290|Q13620|CUL4B	80.45461616416974	0.1919067876629769	6				NaN	NaN	0	NaN	11884	3928	15811
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15815	39.926	NaN	6835.1	30	0	1395.1	0.106	+			34093	RSQAFRGVF	9	68	534.2897492922348	1066.5649456512695	2	534.2918090820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RSQAFRGVF_	ENST00000361545.9_1_7:73819266-73819407:+|nuORF	31.954861631926434	0.5046124803899898	6				NaN	NaN	0	NaN	11885	3928	15811
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15816	39.928	NaN	9546.7	30	0	648.53	0.106			+	51298	YSCVAHVKF	9	81	527.2653545118443	NaN	0	527.2666015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YSCVAHVKF_	REV__tr|U7T475|U7T475_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00370PE=4SV=1	64.20726635412375	0.13137488984569443	6				NaN	NaN	0	NaN	11886	3928	15811
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15817	39.93	NaN	3444.4	30	0	515.63	0.035			+	47011	VKVRCMVM	8	56	491.2574062613116	NaN	0	491.2574462890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_VKVRCM(Oxidation (M))VM_	REV__ENSG00000115825|ENST00000234179|PRKD3;REV__ENST00000475912.1_1_2:37509613-37518050:-|nuORF;REV__ENST00000494667.5_1_2:37496701-37543667:-|nuORF;REV__nc|ENSG00000115825|O94806-2|PRKD3	46.76643321282427	1.7418937515398478	6				NaN	NaN	0	NaN	11887	3928	15811
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15818	39.931	NaN	5906.2	30	0	365.99	0.141	+			2530	APWGATLCEAL	11	77	566.2807381171888	1130.5469233011775	2	566.2822875976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_APWGATLCEAL_	ENST00000255641.12_1_19:1980198-1980525:+|nuORF	32.81241826257853	0.645615689454792	6				NaN	NaN	0	NaN	11888	3928	15811
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15833	39.964	NaN	28279	30	0	4949.4	0.214			+	-1	EMVAPEGVAVM	11	84	574.7709163937469	1147.5272798542937	2	574.772705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_EMVAPEGVAVM(Oxidation (M))_	REV__ENSG00000169855|ENST00000464233|ROBO1;REV__nc|ENSG00000169855|Q9Y6N7-2|ROBO1;REV__nc|ENSG00000169855|Q9Y6N7-3|ROBO1;REV__nc|ENSG00000169855|Q9Y6N7-4|ROBO1;REV__nc|ENSG00000169855|Q9Y6N7-5|ROBO1;REV__nc|ENSG00000169855|Q9Y6N7-6|ROBO1;REV__ROBO1|p.F755Lfs*28|2|0.21|ENSG00000169855|chr3:78661085-78661085|A/-|frameshift_variant;REV__ROBO1|p.K1491Nfs*16|1|0.2|ENSG00000169855|chr3:78607004-78607004|C/-|frameshift_variant;REV__ROBO1|p.R1504Sfs*40|1|0.01|ENSG00000169855|chr3:78606968-78606969|-/TGAC|frameshift_variant	60.97194046774394	0.3147792151722205	6				NaN	NaN	0	NaN	11900	3931	15832
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15834	39.967	NaN	13560	30	0	2005.6	0.106				-1	 	0	90	537.2673708066834	1072.5201886801667	2	537.2693481445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11901	3931	15832
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15835	39.969	NaN	10808	30	0	1210.3	0.106	+			762	AEEKLPMTL	9	82	516.2737854324682	1030.5330179317364	2	516.27587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEEKLPMTL_	ENSG00000165630|ENST00000378572|PRPF18	78.26377905018397	0.10505600812668463	6				NaN	NaN	0	NaN	11902	3931	15832
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15836	39.971	NaN	13578	30	0	1400.5	0.106	+			12544	GEGEGRVGIIL	11	92	550.3077672787475	1098.600981624295	2	550.308837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GEGEGRVGIIL_	CFTR|p.G1208Afs*3|1|0.3|ENSG00000001626|chr7:117627672-117627672|G/-|frameshift_variant;CFTR|p.L1258Ffs*7|1|0.26|ENSG00000001626|chr7:117642487-117642488|-/T|frameshift_variant;CFTR|p.S1297Lfs*31|1|0.28|ENSG00000001626|chr7:117652852-117652852|T/-|frameshift_variant;ENSG00000001626|ENST00000003084|CFTR;nc|ENSG00000001626|P13569-2|CFTR	61.76455937419982	0.30770400073182314	6				NaN	NaN	0	NaN	11903	3931	15832
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15837	39.973	NaN	4718.5	30	0	1374	0.106			+	47910	VSLQLESITQ	10	56	373.20987774270935	NaN	0	373.2099304199219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSLQLESITQ_	REV__ENSG00000224389|ENST00000435363|C4B;REV__ENSG00000244731|ENST00000428956|C4A;REV__nc|ENSG00000244731|P0C0L4-2|C4A	32.81241826257853	0.3924360933802784	6				NaN	NaN	0	NaN	11904	3931	15832
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15838	39.975	NaN	6496.7	30	0	423.95	0.035	+			37365	SLFITTINK	9	78	518.8041589385379	1035.5937649438756	2	518.8060913085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLFITTINK_	ENSG00000132423|ENST00000254759|COQ3	51.19269402634007	0.2889735674168909	6				NaN	NaN	0	NaN	11905	3931	15832
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15839	39.976	NaN	6549.1	30	0	601.78	0.139	+			15790	GVVAVLLTK	9	67	450.298863469743	898.5831740062861	2	450.3001403808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GVVAVLLTK_	ENSG00000169710|ENST00000306749|FASN;FASN|p.A413Hfs*39|2|0.47|ENSG00000169710|chr17:82091478-82091478|G/-|frameshift_variant	110.11987700582712	0.028875675806141952	6				NaN	NaN	0	NaN	11906	3931	15832
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15855	40.011	NaN	52591	30	0	13399	0.214			+	33359	RHLPDNRL	8	92	510.78863535297677	1019.5627177727536	2	510.78985595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RHLPDNRL_	REV__AUTS2|p.H1148Tfs*70|1|0.36|ENSG00000158321|chr7:70790657-70790657|C/-|frameshift_variant;REV__ENSG00000158321|ENST00000342771|AUTS2;REV__nc|ENSG00000158321|Q8WXX7-2|AUTS2;REV__nc|ENSG00000158321|Q8WXX7-5|AUTS2	84.9155231211612	0.2928622555056503	6				NaN	NaN	0	NaN	11919	3934	15854
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15856	40.014	NaN	16803	30	0	2179.1	0.106				-1	 	0	86	528.3070845765236	1054.5996162198471	2	528.3088989257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11920	3934	15854
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15857	40.016	NaN	11579	30	0	1968.8	0.106			+	32873	RDGAGVVSSL	10	72	480.75994423438357	959.5053355355672	2	480.76092529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RDGAGVVSSL_	REV__ENST00000249016.4_1_22:41075352-41075709:+|nuORF	41.42661286455405	0.5359995577334734	6				NaN	NaN	0	NaN	11921	3934	15854
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15858	40.018	NaN	5209.4	30	0	1091.9	0.106			+	3198	ASKKIEGKF	9	47	336.5344378546052	NaN	0	336.5342712402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASKKIEGKF_	REV__tr|U7SUA5|U7SUA5_FUSNUOligopeptidaseFOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01160PE=3SV=1	23.04248740728303	0.3589936788096251	6				NaN	NaN	0	NaN	11922	3934	15854
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15859	40.02	NaN	5969.9	30	0	1226.7	0.106	+			38397	SRYDVRLR	8	69	532.802462854179	1063.590372775158	2	532.8036499023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SRYDVRLR_	ENSG00000268089|ENST00000598523|GABRQ;GABRQ|p.Y90Cfs*5|1|0.18|ENSG00000268089|chrX:152645556-152645557|TA/-|frameshift_variant	42.396135135203025	0.6414440140393314	6				NaN	NaN	0	NaN	11923	3934	15854
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15860	40.022	NaN	3920.9	30	0	989.94	0.037			+	10191	ETCYRFHSL	9	77	578.2647616684774	1154.5149704037547	2	578.2659301757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ETCYRFHSL_	REV__ENST00000426871.1_1_1:151262664-151263682:+|nuORF	39.252832667884924	0.4290233611298554	6				NaN	NaN	0	NaN	11924	3934	15854
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15861	40.022	NaN	6133.6	30	0	956.98	0.14				-1	 	0	79	473.7413883523805	945.468223771561	2	473.74212646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11925	3934	15854
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15877	40.056	NaN	19692	30	0	3826.9	0.214				-1	VAMTAVKHE	9	88	501.2583178429248	1000.5020827526496	2	501.26007080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_VAM(Oxidation (M))TAVKHE_	ENSG00000086598|ENST00000262225|TMED2	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	11938	3937	15876
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15878	40.06	NaN	11762	30	0	3281	0.106				-1	 	0	54	433.75145720959785	865.4883614859957	2	433.7528076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11939	3937	15876
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15879	40.062	NaN	4888.9	30	0	1371	0.106				-1	 	0	69	484.7731462420054	967.5317395508108	2	484.77435302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11940	3937	15876
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15880	40.064	NaN	6079.9	30	0	860.45	0.106	+			42714	TDFKQYQVL	9	73	571.2975356629914	1140.5805183927828	2	571.2991333007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TDFKQYQVL_	ENSG00000174231|ENST00000304992|PRPF8;ENST00000573681.1_1_17:1563133-1564615:-|nuORF;PRPF8|p.D1670Tfs*23|1|0.29|ENSG00000174231|chr17:1659487-1659487|C/-|frameshift_variant	51.19269402634007	0.2889735674168909	6				NaN	NaN	0	NaN	11941	3937	15876
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15881	40.066	NaN	7092.1	30	0	1029.5	0.106				-1	 	0	64	446.23089077538344	890.4472286175669	2	446.23223876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11942	3937	15876
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15882	40.067	NaN	11800	30	0	1753.7	0.037			+	32426	QVHVRSRSGGP	11	65	590.320522218837	1178.626491504474	2	590.3229370117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_QVHVRSRSGGP_	REV__ENST00000349305.8_1_6:135239555-135263608:-|nuORF	37.59989570853033	0.5907838038483115	6				NaN	NaN	0	NaN	11943	3937	15876
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15883	40.068	NaN	4682.6	30	0	547.2	0.141	+			30101	PRGPGGRGLL	10	61	490.29357679077964	978.5726006483593	2	490.29486083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PRGPGGRGLL_	nc|ENSG00000090006|Q8N2S1-3|LTBP4;nc|ENSG00000090006|Q8N2S1|LTBP4	27.882242232435846	0.6521336255503853	6				NaN	NaN	0	NaN	11944	3937	15876
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15896	40.098	NaN	7649.8	30	0	686.52	0.214	+			948	AEITDKLGL	9	82	480.27432982097184	958.5341067087437	2	480.27362060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEITDKLGL_	ENSG00000134287|ENST00000256682|ARF3;ENSG00000143761|ENST00000272102|ARF1;ENST00000444561.2_1_17:43710417-43713807:+|nuORF;ENST00000470670.5_1_1:228284963-228285711:+|nuORF;nc|ENSG00000134287|P61204-2|ARF3	63.53385203322761	0.18415635464017938	6				NaN	NaN	0	NaN	11954	3940	15895
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15897	40.101	NaN	7140.1	30	0	2055	0.106			+	27498	MMKKRGVVY	9	71	564.3049469576131	1126.595340982026	2	564.3084106445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_M(Oxidation (M))MKKRGVVY_	REV__ENSG00000004948|ENST00000426151|CALCR;REV__nc|ENSG00000004948|P30988-1|CALCR;REV__nc|ENSG00000004948|P30988-5|CALCR;REV__nc|ENSG00000004948|P30988-6|CALCR	55.50420428727701	0.2510918378945873	6				NaN	NaN	0	NaN	11955	3940	15895
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15898	40.103	NaN	8496.4	30	0	2279.4	0.106	+			15188	GTSNGNQLVST	11	88	539.2615765255999	1076.5086001179998	2	539.2634887695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GTSNGNQLVST_	ENSG00000105866|ENST00000222584|SP4	50.033510581677724	0.4206539900604183	6				NaN	NaN	0	NaN	11956	3940	15895
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15899	40.105	NaN	3920.9	30	0	521.52	0.106				-1	 	0	56	443.2725110924313	884.5304692516626	2	443.273681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11957	3940	15895
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15900	40.107	NaN	3337.9	30	0	377.36	0.106				-1	 	0	60	504.7702984713581	1007.5260440095162	2	504.7717590332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	11958	3940	15895
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15901	40.109	NaN	5767.9	30	0	397.99	0.106	+			9309	EICWNLQNI	9	86	566.776566928338	1131.5385809234758	2	566.7784423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EICWNLQNI_	ENSG00000087087|ENST00000611405|SRRT;ENST00000466432.1_1_7:100483345-100483628:+|nuORF;nc|ENSG00000087087|Q9BXP5-2|SRRT;nc|ENSG00000087087|Q9BXP5-3|SRRT;nc|ENSG00000087087|Q9BXP5-4|SRRT;nc|ENSG00000087087|Q9BXP5-5|SRRT;SRRT|p.F750Lfs*32|1|0.12|ENSG00000087087|chr7:100887778-100887778|T/-|frameshift_variant	44.116797842482775	0.37197099687881774	6				NaN	NaN	0	NaN	11959	3940	15895
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15902	40.111	NaN	3465.1	30	0	677.03	0.034			+	42142	SYPMHLPS	8	62	466.2208341244488	930.4271153156976	2	466.2220153808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SYPMHLPS_	REV__CC2D2A|p.F1562S|1|0.07|ENSG00000048342|chr4:15601247-15601247|T/C|missense_variant	50.0245360154114	0.5941082100236891	6				NaN	NaN	0	NaN	11960	3940	15895
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15916	40.14	NaN	14372	30	0	1463	0.214			+	51067	YLLIDLCVF	9	73	549.7993248046183	1097.5840966760366	2	549.8012084960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YLLIDLCVF_	REV__ADCY10|p.N1597Tfs*4|1|0.07|ENSG00000143199|chr1:167809721-167809721|T/-|frameshift_variant;REV__ENSG00000143199|ENST00000367851|ADCY10;REV__nc|ENSG00000143199|Q96PN6-2|ADCY10;REV__nc|ENSG00000143199|Q96PN6-3|ADCY10;REV__nc|ENSG00000143199|Q96PN6-4|ADCY10	79.9392285194092	0.09781135437301468	6				NaN	NaN	0	NaN	11971	3943	15915
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15917	40.144	NaN	9592.2	30	0	847.02	0.106			+	6921	CMKRYLYQ	8	72	552.7687798202901	1103.52300670738	2	552.7719116210938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_CMKRYLYQ_	REV__ENST00000605755.5_1_1:85135569-85156059:-|nuORF	49.44154591367651	0.597725784090933	6				NaN	NaN	0	NaN	11972	3943	15915
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15918	40.146	NaN	8299.6	30	0	1537.6	0.106	+			23881	LDHKLAEVS	9	73	506.2775198097984	1010.5404866863968	2	506.2790222167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LDHKLAEVS_	ENSG00000187239|ENST00000446176|FNBP1;nc|ENSG00000187239|Q96RU3-2|FNBP1;nc|ENSG00000187239|Q96RU3-3|FNBP1;nc|ENSG00000187239|Q96RU3-4|FNBP1;nc|ENSG00000187239|Q96RU3-5|FNBP1	68.78682469695295	0.14603441672067394	6				NaN	NaN	0	NaN	11973	3943	15915
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15919	40.148	NaN	3835.3	30	0	409.66	0.106	+			50945	YIAAFPPHEGA	11	77	586.790379710205	1171.56620648721	2	586.79248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YIAAFPPHEGA_	ANO3|p.F764Lfs*11|1|0.14|ENSG00000134343|chr11:26643195-26643195|T/-|frameshift_variant;ANO3|p.I617Lfs*8|1|0.05|ENSG00000134343|chr11:26624469-26624469|A/-|frameshift_variant;ANO3|p.L701*|1|0.45|ENSG00000134343|chr11:26639198-26639198|T/-|frameshift_variant;ENSG00000134343|ENST00000256737|ANO3;nc|ENSG00000134343|Q9BYT9-2|ANO3	36.31764250033197	0.6083289427130232	6				NaN	NaN	0	NaN	11974	3943	15915
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15920	40.149	NaN	3379.6	30	0	1208.2	0.106			+	31084	QFIMTAFTEE	10	74	608.78052100089	1215.5464890685798	2	608.782470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QFIMTAFTEE_	REV__ENST00000566201.6_1_16:46508202-46534771:-|nuORF;REV__ENST00000571006.5_1_16:46521999-46540142:-|nuORF	54.776311868738084	0.41334902933431344	6				NaN	NaN	0	NaN	11975	3943	15915
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15921	40.151	NaN	3650	30	0	410.31	0.035	+			23656	LARRLRDP	8	64	498.8065194094967	995.5984858857934	2	498.80828857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LARRLRDP_	ENST00000396958.7_2_16:2933286-2946389:+|nuORF;ENST00000573965.1_3_16:2933286-2946490:+|nuORF	44.53106598305862	0.628196326904373	6				NaN	NaN	0	NaN	11976	3943	15915
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15922	40.152	NaN	3248.8	30	0	392.13	0.141				-1	EYMSIIVGAL	10	67	556.2886452247789	1110.5627375163576	2	556.7906494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_EYM(Oxidation (M))SIIVGAL_	ENSG00000128815|ENST00000325239|WDFY4;nc|ENSG00000128815|Q6ZS81-2|WDFY4;nc|ENSG00000128815|Q6ZS81-3|WDFY4;nc|ENSG00000128815|Q6ZS81-4|WDFY4;nc|ENSG00000128815|Q6ZS81-5|WDFY4;WDFY4|p.E2278Kfs*20|2|0.3|ENSG00000128815|chr10:48873577-48873577|G/-|frameshift_variant;WDFY4|p.L901Sfs*22|1|0.22|ENSG00000128815|chr10:48774601-48774601|C/-|frameshift_variant;WDFY4|p.Q1607Sfs*14|1|0.47|ENSG00000128815|chr10:48807934-48807934|C/-|frameshift_variant;WDFY4|p.R948Tfs*54|1|0.33|ENSG00000128815|chr10:48775775-48775776|-/CA|frameshift_variant	26.69291269510374	0.6618461711292317	6				NaN	NaN	0	NaN	11977	3943	15915
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15935	40.182	NaN	9368.4	30	0	1248.2	0.214	+			43803	TLLTSRRRE	9	77	566.3332293352058	1130.6519057372116	2	566.3350830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TLLTSRRRE_	ENST00000397147.6_1_22:37257112-37260979:+|nuORF	56.632244143249146	0.24168844994051353	6				NaN	NaN	0	NaN	11987	3946	15934
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15936	40.185	NaN	6061.1	30	0	929.72	0.106	+			27878	MTKLLPWR	8	75	522.8046745318502	1043.5947961305003	2	522.8065185546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MTKLLPWR_	ENST00000518696.5_1_8:121457418-121457517:-|nuORF	69.6276240434122	0.4100012001731381	6				NaN	NaN	0	NaN	11988	3946	15934
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15937	40.187	NaN	5469	30	0	747.56	0.106			+	13230	GIIEGPKNGL	10	75	499.2881609753288	996.5617690174577	2	499.28912353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GIIEGPKNGL_	REV__tr|U7SL85|U7SL85_FUSNUABCtransporterdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02014PE=4SV=1	47.227680397652996	0.4825456260682108	6				NaN	NaN	0	NaN	11989	3946	15934
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15938	40.189	NaN	3878.4	30	0	720.16	0.106			+	34755	RYCAPLAVI	9	65	503.28136792703106	1004.5481829208621	2	503.2826843261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RYCAPLAVI_	REV__ENST00000256646.6_1_1:120457390-120457519:-|nuORF	50.0245360154114	0.3026755932229825	6				NaN	NaN	0	NaN	11990	3946	15934
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15939	40.191	NaN	2668.9	30	0	582.76	0.106	+			43101	TEQGKKVR	8	61	473.2780102944841	944.5414676557682	2	473.2790222167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TEQGKKVR_	ENSG00000112992|ENST00000344920|NNT	32.81241826257853	0.7059802730411993	6				NaN	NaN	0	NaN	11991	3946	15934
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15940	40.193	NaN	3421	30	0	375.54	0.106	+			27452	MLLGRELR	8	67	494.2931985165319	986.5718440998638	2	494.295166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MLLGRELR_	ENST00000393537.4_1_2:97513863-97513980:-|nuORF	37.15910966729921	0.6739408393984688	6				NaN	NaN	0	NaN	11992	3946	15934
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15941	40.194	NaN	3319.2	30	0	1163.1	0.038	+			1454	AFCNADVVIRA	11	58	393.5368400092091	1177.5886906278272	3	393.53826904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AFCNADVVIRA_	ENSG00000035862|ENST00000262768|TIMP2	29.550750289552195	0.6798279264880025	6				NaN	NaN	0	NaN	11993	3946	15934
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15954	40.222	NaN	12274	30	0	2402.9	0.214	+			46614	VFVCVCFSR	9	73	530.259704135395	1058.50485533759	2	530.2616577148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VFVCVCFSR_	ENST00000306749.3_1_17:80036222-80036480:-|nuORF	45.9519527083369	0.35044536499095585	6				NaN	NaN	0	NaN	12003	3949	15953
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15955	40.226	NaN	3895.9	30	0	362.4	0.106			+	32124	QSLANQQFTY	10	75	600.2882534851121	1198.5619540370242	2	600.2909545898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QSLANQQFTY_	REV__ENSG00000105996|ENST00000222718|HOXA2	35.15202426646627	0.5927656479315102	6				NaN	NaN	0	NaN	12004	3949	15953
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15956	40.228	NaN	5441.1	30	0	872.26	0.106				-1	CVSHICAVL	9	72	501.2501651075016	1000.4857772818032	2	501.2513122558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_CVSHIC(Carbamidomethyl (C))AVL_	ENSG00000176893|ENST00000641926|OR51G2;ENSG00000176895|ENST00000641490|OR51A7;ENSG00000278870|ENST00000623849|OR51G1	42.47446043378293	0.39123495718708534	6				NaN	NaN	0	NaN	12005	3949	15953
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15957	40.23	NaN	3899.4	30	0	656.2	0.106	+			3240	ASLDTGLLLG	10	66	480.27432982097184	958.5341067087437	2	480.77886962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASLDTGLLLG_	ENST00000311956.8_1_11:46700251-46700590:-|nuORF	47.91560031466742	0.4762067885998563	6				NaN	NaN	0	NaN	12006	3949	15953
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15958	40.231	NaN	4985.4	30	0	833.32	0.106	+			4088	ATDLTFLEK	9	75	519.2782189082101	1036.54188488322	2	519.2804565429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ATDLTFLEK_	ENSG00000197879|ENST00000648651|MYO1C;ENST00000573961.1_1_17:1380797-1381223:-|nuORF;nc|ENSG00000197879|O00159-2|MYO1C;nc|ENSG00000197879|O00159-3|MYO1C	93.1432384553994	0.056003526918089595	6				NaN	NaN	0	NaN	12007	3949	15953
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15959	40.233	NaN	1785.2	30	0	320.61	0.106			+	43454	TGLVLSSLTH	10	41	343.19766570240824	NaN	0	343.19781494140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TGLVLSSLTH_	REV__ENST00000307630.4_1_7:75958368-75958587:-|nuORF	33.921630207806714	0.38879399011744475	6				NaN	NaN	0	NaN	12008	3949	15953
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15960	40.235	NaN	2031.4	30	0	137.37	0.037	+			30031	PPRAGEARPGP	11	53	368.86851104254094	1103.583703727823	3	368.86981201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PPRAGEARPGP_	ENSG00000161011|ENST00000389805|SQSTM1;ENST00000466342.1_1_5:179250916-179260288:+|nuORF;nc|ENSG00000161011|Q13501-2|SQSTM1	19.996771675451527	0.7768568223548057	6				NaN	NaN	0	NaN	12009	3949	15953
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15972	40.261	NaN	28018	30	0	2943.7	0.214	+			34067	RSPAESRAPE	10	90	550.2785997547203	1098.5426465762405	2	550.2807006835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RSPAESRAPE_	ENSG00000175471|ENST00000515393|MCTP1;MCTP1|p.K875Rfs*4|3|0.53|ENSG00000175471|chr5:94714873-94714873|T/-|frameshift_variant;MCTP1|p.N668Kfs*5|1|0.21|ENSG00000175471|chr5:94873171-94873172|-/T|frameshift_variant	75.04331003522576	0.23611669241777622	6				NaN	NaN	0	NaN	12018	3952	15971
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15973	40.265	NaN	12744	30	0	1816.2	0.106	+			29821	PKPKFVVAN	9	78	500.30295125510185	998.5913495770037	2	500.3047180175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PKPKFVVAN_	ENSG00000180263|ENST00000343958|FGD6;FGD6|p.K498Nfs*39|1|0.4|ENSG00000180263|chr12:95209790-95209790|T/-|frameshift_variant;FGD6|p.M414Wfs*11|1|0.26|ENSG00000180263|chr12:95210044-95210044|T/-|frameshift_variant;FGD6|p.S531Vfs*6|1|0.33|ENSG00000180263|chr12:95209693-95209693|T/-|frameshift_variant;nc|ENSG00000180263|Q6ZV73-2|FGD6	51.33545320467046	0.2872990594074956	6				NaN	NaN	0	NaN	12019	3952	15971
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15974	40.267	NaN	8369.9	30	0	1559.4	0.106	+			12841	GENVIISHF	9	70	508.26414639168223	NaN	0	508.2640075683594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GENVIISHF_	ENSG00000177666|ENST00000336615|PNPLA2;ENST00000525250.5_1_11:821680-823850:+|nuORF	79.48907831485694	0.07313446400987221	6				NaN	NaN	0	NaN	12020	3952	15971
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15975	40.269	NaN	8647	30	0	1124.4	0.106	+			27514	MNMKLALIR	9	74	553.3150055598886	1104.6154581865771	2	553.3171997070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_M(Oxidation (M))NMKLALIR_	ENSG00000106258|ENST00000222982|CYP3A5;ENSG00000160868|ENST00000651514|CYP3A4	58.78195531508484	0.22376836668196862	6				NaN	NaN	0	NaN	12021	3952	15971
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15976	40.27	NaN	6200.3	30	0	961.24	0.106	+			16596	HGGKARQK	8	60	441.2568426099498	880.4991322866996	2	441.25823974609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HGGKARQK_	ENSG00000083814|ENST00000317398|ZNF671	44.53106598305862	0.628196326904373	6				NaN	NaN	0	NaN	12022	3952	15971
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15977	40.272	NaN	2753.9	30	0	227.66	0.106			+	8734	EEESRSVQEL	10	80	603.287884432345	NaN	0	603.2884521484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EEESRSVQEL_	REV__ENSG00000154783|ENST00000285046|FGD5;REV__FGD5|p.D818*|1|0.19|ENSG00000154783|chr3:14821521-14821522|-/C|frameshift_variant;REV__FGD5|p.T1238Pfs*9|1|0.25|ENSG00000154783|chr3:14922447-14922447|C/-|frameshift_variant	81.52500206392136	0.09195728362689543	6				NaN	NaN	0	NaN	12023	3952	15971
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15978	40.274	NaN	1396.9	30	0	92.712	0.031				-1	 	0	51	347.19776234012545	692.3809717470509	2	347.19879150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12024	3952	15971
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15991	40.301	NaN	17465	30	0	1832.6	0.214	+			27402	MKRLSMEI	8	76	520.2675547561481	1038.5205565790961	2	520.269287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_M(Oxidation (M))KRLSM(Oxidation (M))EI_	ENSG00000186575|ENST00000338641|NF2;ENST00000432151.5_1_22:30070843-30090795:+|nuORF;nc|ENSG00000186575|P35240-2|NF2;nc|ENSG00000186575|P35240-3|NF2;nc|ENSG00000186575|P35240-4|NF2;nc|ENSG00000186575|P35240-5|NF2;nc|ENSG00000186575|P35240-6|NF2;nc|ENSG00000186575|P35240-8|NF2	60.97194046774394	0.49215940876911696	6				NaN	NaN	0	NaN	12034	3955	15990
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15992	40.305	NaN	9412.1	30	0	3099	0.106			+	33845	RRERTLLA	8	78	507.81172927483715	1013.6089056164743	2	507.81329345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RRERTLLA_	REV__ENST00000419296.1_1_2:110752028-110752415:+|nuORF	60.97194046774394	0.49215940876911696	6				NaN	NaN	0	NaN	12035	3955	15990
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15993	40.307	NaN	9138.5	30	0	868.87	0.106	+			50747	YEKILFTEA	9	89	557.2931283647159	1112.5717037962318	2	557.29541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YEKILFTEA_	ENSG00000099341|ENST00000215071|PSMD8	89.02883481214508	0.06760336634167786	6				NaN	NaN	0	NaN	12036	3955	15990
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15994	40.309	NaN	5185.2	30	0	533.27	0.106	+			27153	MCIEVLFLL	9	81	540.793712924874	1079.5728729165478	2	540.7958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MCIEVLFLL_	ADCY9|p.L286Cfs*19|1|0.23|ENSG00000162104|chr16:4114588-4114588|C/-|frameshift_variant;ADCY9|p.P366Qfs*18|1|0.03|ENSG00000162104|chr16:4114339-4114346|GTTCTTGG/-|frameshift_variant;ENSG00000162104|ENST00000294016|ADCY9	39.252832667884924	0.4290233611298554	6				NaN	NaN	0	NaN	12037	3955	15990
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15995	40.311	NaN	4719.8	30	0	1228.9	0.106	+			23840	LCWGYYILKM	10	71	645.3247349709878	1288.6349170087756	2	645.326416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LCWGYYILKM_	CERS3|p.Y317C|1|0.1|ENSG00000154227|chr15:100455942-100455942|T/C|missense_variant	30.503639358989545	0.6307262373768582	6				NaN	NaN	0	NaN	12038	3955	15990
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15996	40.312	NaN	8766.7	30	0	1099.6	0.035				-1	 	0	73	497.2700898430585	992.525626752917	2	497.2715148925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12039	3955	15990
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	15997	40.313	NaN	3818.7	30	0	543.15	0.139				-1	 	0	65	483.2723606603207	964.5301683874414	2	483.2733459472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12040	3955	15990
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16015	40.352	NaN	23657	30	0	6428.6	0.214			+	12009	FVVVMPELL	9	80	531.7991738866488	1061.5837948400974	2	531.8013916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_FVVVM(Oxidation (M))PELL_	REV__tr|U7SZJ7|U7SZJ7_FUSNUGeneralsecretionpathwayproteinFOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00777PE=3SV=1	68.484700416344	0.1473408039581241	6				NaN	NaN	0	NaN	12055	3958	16014
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16016	40.356	NaN	3635.8	30	0	360.15	0.106			+	-1	VIQQHMGMLQ	10	75	608.796131864248	1215.5777107952958	2	608.7977294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Oxidation (M)	_VIQQHM(Oxidation (M))GM(Oxidation (M))LQ_	REV__ENSG00000198646|ENST00000359003|NCOA6;REV__NCOA6|p.N724Ifs*20|1|0.26|ENSG00000198646|chr20:34750026-34750026|C/-|frameshift_variant;REV__NCOA6|p.P1168Tfs*41|1|0.1|ENSG00000198646|chr20:34742754-34742755|-/T|frameshift_variant;REV__NCOA6|p.P666Rfs*12|1|0.26|ENSG00000198646|chr20:34750198-34750198|G/-|frameshift_variant	51.33545320467046	0.4446945571623749	6				NaN	NaN	0	NaN	12056	3958	16014
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16017	40.358	NaN	5251.2	30	0	474.3	0.106	+			21459	KNGERPSHEV	10	81	576.7909991407446	1151.567445348289	2	576.7931518554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KNGERPSHEV_	ENSG00000021776|ENST00000156471|AQR;ENST00000543879.6_1_15:35148995-35166226:-|nuORF	64.20726635412375	0.3275756395432415	6				NaN	NaN	0	NaN	12057	3958	16014
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16018	40.36	NaN	4767.9	30	0	428.33	0.106	+			50913	YGIIEEIKY	9	72	564.3049469576131	1126.595340982026	2	564.3023681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YGIIEEIKY_	ENST00000481445.1_1_X:77160826-77160874:+|nuORF	29.14955571784316	0.5308295550522326	6				NaN	NaN	0	NaN	12058	3958	16014
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16019	40.361	NaN	3458.4	30	0	458.33	0.106	+			46577	VFMPQHIMA	9	66	537.2673708066834	1072.5201886801667	2	537.26904296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VFMPQHIMA_	ENSG00000165389|ENST00000298130|SPTSSA	35.200714571348534	0.47427825964483533	6				NaN	NaN	0	NaN	12059	3958	16014
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16020	40.363	NaN	3206.2	30	0	307.1	0.037			+	48271	VTDMLVFDAK	10	75	569.7961840896434	1137.5778152460866	2	569.7992553710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VTDMLVFDAK_	REV__ENSG00000176658|ENST00000318217|MYO1D	53.08895987439943	0.42869529153390606	6				NaN	NaN	0	NaN	12060	3958	16014
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16021	40.364	NaN	3357.9	30	0	282.6	0.141				-1	LYLFNSITM	9	68	559.283943854794	1116.5533347763878	2	559.2849731445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_LYLFNSITM(Oxidation (M))_	ENST00000468313.5_1_17:39657932-39661743:-|nuORF	71.29570347882199	0.13518600952103718	6				NaN	NaN	0	NaN	12061	3958	16014
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16038	40.401	NaN	48707	30	0	8680.7	0.214	+			22175	KSSKSKSQL	9	89	496.79071563047387	991.5668783277478	2	496.79217529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSSKSKSQL_	ENSG00000204172|ENST00000452145|AGAP9;nc|ENSG00000204172|Q5VTM2|AGAP9	84.9155231211612	0.07920012719736333	6				NaN	NaN	0	NaN	12075	3961	16037
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16039	40.404	NaN	16881	30	0	3492.1	0.106	+			36807	SIDYSRLNK	9	78	548.2931941525057	1094.5718353718114	2	548.295654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SIDYSRLNK_	CEP162|p.I224Nfs*16|1|0.5|ENSG00000135315|chr6:84203997-84203998|-/T|frameshift_variant;CEP162|p.K1098Rfs*20|1|0.46|ENSG00000135315|chr6:84152881-84152881|T/-|frameshift_variant;CEP162|p.N1181Mfs*3|2|0.21|ENSG00000135315|chr6:84152632-84152632|T/-|frameshift_variant;CEP162|p.Q686Tfs*11|1|0.39|ENSG00000135315|chr6:84174158-84174159|-/T|frameshift_variant;CEP162|p.R1099Efs*46|2|0.27|ENSG00000135315|chr6:84152880-84152881|-/T|frameshift_variant;ENSG00000135315|ENST00000403245|CEP162;ENST00000497936.5_1_6:84884653-84936120:-|nuORF;nc|ENSG00000135315|Q5TB80-2|CEP162	101.60071028292904	0.0375685401170269	6				NaN	NaN	0	NaN	12076	3961	16037
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16040	40.406	NaN	5421.3	30	0	923.17	0.106	+			50594	YDKAAKIAK	9	55	336.5344378546052	NaN	0	336.5343017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YDKAAKIAK_	ENSG00000091483|ENST00000366560|FH;ENST00000442741.1_1_13:42830025-42830667:+|nuORF;nc|ENSG00000091483|P07954-2|FH	27.882242232435846	0.3367954786602879	6				NaN	NaN	0	NaN	12077	3961	16037
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16041	40.408	NaN	7420.4	30	0	1227.9	0.106				-1	IKTCACHY	8	74	526.7363019797725	1051.458051026345	2	526.738037109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_IKTC(Carbamidomethyl (C))AC(Carbamidomethyl (C))HY_	ENSG00000118523|ENST00000367976|CCN2;nc|ENSG00000118523|P29279-2|CCN2	50.0245360154114	0.5941082100236891	6				NaN	NaN	0	NaN	12078	3961	16037
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16042	40.41	NaN	9169.1	30	0	1045.4	0.106	+			27224	MEKIPVSAF	9	80	511.27093724237136	1020.5273215515427	2	511.2728271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MEKIPVSAF_	ENSG00000106541|ENST00000419304|AGR2	90.14881205920913	0.06444578693273594	6				NaN	NaN	0	NaN	12079	3961	16037
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16043	40.412	NaN	6746.8	30	0	1849.1	0.033				-1	 	0	61	433.75145720959785	865.4883614859957	2	433.7524108886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12080	3961	16037
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16044	40.412	NaN	3757.6	30	0	371.45	0.139	+			9912	EQQVRVVQ	8	70	493.2747410138297	984.5349290944595	2	493.27557373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EQQVRVVQ_	ENSG00000008710|ENST00000262304|PKD1;ENST00000532415.5_1_16:18480742-18495490:-|nuORF;nc|ENSG00000008710|P98161-2|PKD1;nc|ENSG00000008710|P98161-3|PKD1;PKD1|p.A696Rfs*18|1|0.23|ENSG00000008710|chr16:2115389-2115390|-/G|frameshift_variant;PKD1|p.V476Wfs*82|1|0.09|ENSG00000008710|chr16:2117013-2117013|C/-|frameshift_variant	49.44154591367651	0.597725784090933	6				NaN	NaN	0	NaN	12081	3961	16037
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16060	40.447	NaN	166260	30	0	32643	0.158				-1	 	0	76	483.2673442365429	964.5201355398858	2	483.2684326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12094	3964	16059
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16061	40.45	NaN	17557	30	0	2761	0.106				-1	 	0	81	534.8228166902956	1067.631080447391	2	534.8245239257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12095	3964	16059
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16062	40.452	NaN	4124.7	30	0	643.12	0.106			+	46057	VCGRCLAL	8	53	446.23089077538344	890.4472286175669	2	446.2318420410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_VC(Carbamidomethyl (C))GRCLAL_	REV__PTGFRN|p.R22C|1|0.38|ENSG00000134247|chr1:116941729-116941729|C/T|missense_variant	52.29916861842294	0.578018602984656	6				NaN	NaN	0	NaN	12096	3964	16059
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16063	40.453	NaN	4970.1	30	0	827.66	0.106			+	18807	ITTRQSIE	8	64	474.2621188891293	946.5096848450586	2	474.2630310058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ITTRQSIE_	REV__ENSG00000082482|ENST00000444842|KCNK2;REV__nc|ENSG00000082482|O95069-2|KCNK2;REV__nc|ENSG00000082482|O95069-3|KCNK2;REV__nc|ENSG00000082482|O95069-4|KCNK2	63.30626980617807	0.4690498839812213	6				NaN	NaN	0	NaN	12097	3964	16059
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16064	40.455	NaN	3605.2	30	0	166.35	0.106			+	-1	QFCVCFDE	8	76	552.7081343564375	1103.401715779675	2	552.7103881835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C)	_QFC(Carbamidomethyl (C))VC(Carbamidomethyl (C))FDE_	REV__ADGB|p.K1379Rfs*12|1|0.29|ENSG00000118492|chr6:146784714-146784714|A/-|frameshift_variant;REV__ENSG00000118492|ENST00000397944|ADGB	25.450171626174864	0.7628259754767981	6				NaN	NaN	0	NaN	12098	3964	16059
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16065	40.457	NaN	5574.9	30	0	433.55	0.106			+	24141	LELAKIAAAN	10	69	507.3033936513638	NaN	0	507.302734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LELAKIAAAN_	REV__ENSG00000114062|ENST00000648336|UBE3A;REV__nc|ENSG00000114062|Q05086-2|UBE3A;REV__nc|ENSG00000114062|Q05086|UBE3A;REV__UBE3A|p.K226Nfs*2|1|0.34|ENSG00000114062|chr15:25371505-25371505|T/-|frameshift_variant;REV__UBE3A|p.N105Tfs*7|1|0.35|ENSG00000114062|chr15:25375523-25375523|G/-|frameshift_variant	45.97224482568171	0.33106653400957564	6				NaN	NaN	0	NaN	12099	3964	16059
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16066	40.459	NaN	4949.6	30	0	446.28	0.038	+			9813	EPFTGSSKILY	11	81	621.3227243944332	1240.6308958556663	2	621.3241577148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EPFTGSSKILY_	CDH17|p.S645Lfs*3|1|0.55|ENSG00000079112|chr8:94146163-94146163|C/-|frameshift_variant;ENSG00000079112|ENST00000027335|CDH17	123.11161354013207	0.014199556112152378	6				NaN	NaN	0	NaN	12100	3964	16059
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16084	40.496	NaN	19135	30	0	1903.6	0.214	+			21740	KQMIKEGSI	9	82	525.2844514178319	1048.5543499024636	2	525.78662109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_KQM(Oxidation (M))IKEGSI_	tr|U7T622|U7T622_FUSNUHTHtetR-typedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00347PE=4SV=1	49.44154591367651	0.3095138337212152	6				NaN	NaN	0	NaN	12115	3967	16083
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16085	40.5	NaN	15613	30	0	4064.3	0.106				-1	MERASCLLL	9	74	546.7798267990446	1091.545100664889	2	546.7809448242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_MERASC(Carbamidomethyl (C))LLL_	ENSG00000170458|ENST00000302014|CD14	104.0567914643314	0.03506238181059741	6				NaN	NaN	0	NaN	12116	3967	16083
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16086	40.502	NaN	10252	30	0	1514.8	0.106			+	-1	MQPTTWGLI	9	78	531.7698951834798	1061.5252374337595	2	531.7711791992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))QPTTWGLI_	REV__nc|ENSG00000180483|Q8N690-2|DEFB119	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	12117	3967	16083
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16087	40.504	NaN	4367.1	30	0	368.86	0.106				-1	 	0	79	434.76487576696775	867.5151986007355	2	434.76617431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12118	3967	16083
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16088	40.506	NaN	8390.4	30	0	2721.2	0.106	+			21519	KNQIGNSELP	10	78	550.2911229001096	1098.567692867019	2	550.2940063476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KNQIGNSELP_	ENSG00000122432|ENST00000699524|SPATA1;nc|ENSG00000122432|Q5VX52-2|SPATA1;nc|ENSG00000122432|Q5VX52-4|SPATA1;nc|ENSG00000122432|Q5VX52|SPATA1	52.936696900407355	0.4300801048568001	6				NaN	NaN	0	NaN	12119	3967	16083
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16089	40.507	NaN	3234.8	30	0	275.37	0.034	+			23215	KYGFGYQL	8	59	488.24951762790806	974.4844823226161	2	488.2501525878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KYGFGYQL_	ENSG00000145632|ENST00000274289|PLK2;ENSG00000185988|ENST00000454744|PLK5;nc|ENSG00000185988|Q496M5-2|PLK5	90.77665401227738	0.27511901818546464	6				NaN	NaN	0	NaN	12120	3967	16083
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16090	40.508	NaN	6171.9	30	0	455.95	0.141	+			50445	YADRRGKQL	9	71	553.8064306509444	1105.5983083686888	2	553.8092651367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YADRRGKQL_	ENSG00000142606|ENST00000378412|MMEL1;MMEL1|p.R57H|1|0.29|ENSG00000142606|chr1:2612189-2612189|C/T|missense_variant;nc|ENSG00000142606|Q495T6-2|MMEL1;nc|ENSG00000142606|Q495T6-3|MMEL1	45.9519527083369	0.35044536499095585	6				NaN	NaN	0	NaN	12121	3967	16083
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16106	40.543	NaN	22636	30	0	3527.6	0.214			+	18062	IIYEEDKEL	9	80	576.295621346145	1150.57668975909	2	576.2979125976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IIYEEDKEL_	REV__tr|U7SUD3|U7SUD3_FUSNUDUF5673domain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01385PE=4SV=1	79.71258880314673	0.09879134589249085	6				NaN	NaN	0	NaN	12134	3970	16105
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16107	40.547	NaN	5674.4	30	0	330.7	0.106	+			20473	KEWLLSDI	8	68	502.2768551859705	1002.539157438741	2	502.27874755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KEWLLSDI_	ENSG00000091138|ENST00000340010|SLC26A3;SLC26A3|p.D99Sfs*3|1|0.07|ENSG00000091138|chr7:107791917-107791918|-/AGTTACT|frameshift_variant	35.61828744233558	0.6843154725607303	6				NaN	NaN	0	NaN	12135	3970	16105
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16108	40.549	NaN	3990.4	30	0	923.86	0.106				-1	 	0	64	565.2809352324653	564.2736587658652	1	565.2833251953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12136	3970	16105
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16109	40.55	NaN	4430.9	30	0	407.1	0.106			+	-1	IIMDTYQL	8	69	506.75538870333037	1011.4962244734608	2	506.7550354003906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_IIM(Oxidation (M))DTYQL_	REV__ENST00000447139.1_1_3:194365721-194365820:+|nuORF	63.30626980617807	0.4690498839812213	6				NaN	NaN	0	NaN	12137	3970	16105
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16110	40.552	NaN	3698.1	30	0	578.24	0.106	+			51310	YSHPVTMP	8	61	466.2208341244488	930.4271153156976	2	466.2220153808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YSHPVTMP_	ENSG00000271605|ENST00000619286|MILR1;nc|ENSG00000271605|Q7Z6M3-3|MILR1	33.51558372728122	0.7005509609380386	6				NaN	NaN	0	NaN	12138	3970	16105
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16111	40.554	NaN	13359	30	0	6015.5	0.035	+			11733	FSFSFLIAL	9	71	522.7937657221132	1043.5729785110263	2	522.7965698242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FSFSFLIAL_	nc|ENSG00000221932|Q6WQI6|HEPN1	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	12139	3970	16105
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16112	40.555	NaN	2592	30	0	178.91	0.14			+	-1	RGENFYMP	8	68	515.2261352539062	NaN	0	515.2261352539062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_RGENFYM(Oxidation (M))P_	REV__ENSG00000137809|ENST00000315757|ITGA11;REV__nc|ENSG00000137809|Q9UKX5-2|ITGA11	37.15910966729921	1.7418937515398478	6				NaN	NaN	0	NaN	12140	3970	16105
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16125	40.583	NaN	4306.7	30	0	390.91	0.214			+	23825	LCSLVWRL	8	66	495.2834340764668	988.5523152197336	2	495.2847595214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LCSLVWRL_	REV__ENSG00000052749|ENST00000370992|RRP12	38.80614096846853	0.6637206697844082	6				NaN	NaN	0	NaN	12150	3973	16124
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16126	40.587	NaN	2671.6	30	0	230.65	0.106	+			33498	RKKRMILHFW	10	60	472.2821108252689	NaN	0	472.2820739746094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RKKRMILHFW_	ENST00000454295.6_1_5:68736280-68737401:+|nuORF	36.446750945000026	0.3805027428805705	6				NaN	NaN	0	NaN	12151	3973	16124
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16127	40.589	NaN	7682.1	30	0	732.41	0.106				-1	VMMNLHWI	8	80	530.259704135395	1058.50485533759	2	530.2625122070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_VM(Oxidation (M))MNLHWI_	ENST00000513622.1_1_5:32271983-32274189:-|nuORF	37.028477286268924	0.6747514403204248	6				NaN	NaN	0	NaN	12152	3973	16124
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16128	40.591	NaN	4946.7	30	0	391.12	0.106	+			49561	VYDQQREVY	9	78	600.2882534851121	1198.5619540370242	2	600.2903442382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VYDQQREVY_	CEP55|p.D247Ifs*9|1|0.25|ENSG00000138180|chr10:93516987-93516987|A/-|frameshift_variant;ENSG00000138180|ENST00000371485|CEP55;nc|ENSG00000138180|Q53EZ4-2|CEP55	42.396135135203025	0.392153681582562	6				NaN	NaN	0	NaN	12153	3973	16124
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16129	40.592	NaN	4407.3	30	0	374.86	0.106	+			32832	RCLGFQFTPA	10	75	570.2876074772148	1138.5606620212295	2	570.2918090820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RCLGFQFTPA_	ENSG00000079435|ENST00000244289|LIPE;nc|ENSG00000079435|Q05469-2|LIPE	42.396135135203025	0.5270658956260207	6				NaN	NaN	0	NaN	12154	3973	16124
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16130	40.594	NaN	4289	30	0	727.98	0.106			+	-1	FEKPILEM	8	64	511.7652240348033	1021.5158951364066	2	512.2684326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_FEKPILEM(Oxidation (M))_	REV__GRIN2A|p.T265M|1|0.29|ENSG00000183454|chr16:9938172-9938172|G/A|missense_variant	38.80614096846853	0.6637206697844082	6				NaN	NaN	0	NaN	12155	3973	16124
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16131	40.596	NaN	1827.1	30	0	76.375	0.034	+			37516	SLLLRTSSP	9	65	487.2884826660156	NaN	0	487.2884826660156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SLLLRTSSP_	ENSG00000080709|ENST00000673685|KCNN2	47.657333605630114	0.2228375344433429	6				NaN	NaN	0	NaN	12156	3973	16124
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16145	40.625	NaN	1853.1	30	0	131.87	0.215				-1	 	0	53	347.19776234012545	692.3809717470509	2	347.19854736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12167	3976	16144
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16146	40.629	NaN	5148.5	30	0	874.65	0.106				-1	MVRAVGDEM	9	70	512.2321748202844	1022.4497967073688	2	512.2342529296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_MVRAVGDEM(Oxidation (M))_	ENSG00000101109|ENST00000372806|STK4;nc|ENSG00000101109|Q13043-2|STK4	39.252832667884924	0.4290233611298554	6				NaN	NaN	0	NaN	12168	3976	16144
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16147	40.631	NaN	3212.3	30	0	330.5	0.106			+	17248	HVYNRPCHL	9	79	569.7817755231017	NaN	0	569.7814331054688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HVYNRPCHL_	REV__ENSG00000106128|ENST00000326139|GHRHR	47.91560031466742	0.22105767942158736	6				NaN	NaN	0	NaN	12169	3976	16144
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16148	40.633	NaN	4586.8	30	0	1199.3	0.034	+			24244	LETIIKSL	8	70	458.78867208587707	NaN	0	458.7879638671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LETIIKSL_	ENSG00000127527|ENST00000455140|EPS15L1;nc|ENSG00000127527|Q9UBC2-3|EPS15L1;nc|ENSG00000127527|Q9UBC2-4|EPS15L1;nc|ENSG00000127527|Q9UBC2|EPS15L1	49.44154591367651	1.7418937515398478	6				NaN	NaN	0	NaN	12170	3976	16144
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16163	40.664	NaN	9096.2	30	0	2543.1	0.214	+			18868	IVGKRRKT	8	65	479.3194146473345	956.624276361469	2	479.3204650878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IVGKRRKT_	ENST00000416221.5_1_1:231658373-231664296:-|nuORF;ENST00000425412.1_1_1:231663082-231664218:-|nuORF;ENST00000454631.1_1_1:231660190-231664218:-|nuORF	45.9519527083369	0.6193794311207887	6				NaN	NaN	0	NaN	12182	3979	16162
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16164	40.667	NaN	10568	30	0	2227.9	0.106				-1	EPLLFFGVM	9	78	534.775334218151	1067.5361155031019	2	534.7766723632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_EPLLFFGVM(Oxidation (M))_	ENSG00000152104|ENST00000366956|PTPN14;PTPN14|p.I318Hfs*29|1|0.18|ENSG00000152104|chr1:214391023-214391024|-/G|frameshift_variant;PTPN14|p.M845Rfs*2|1|0.04|ENSG00000152104|chr1:214383321-214383322|-/TC|frameshift_variant;PTPN14|p.Y570Tfs*29|1|0.36|ENSG00000152104|chr1:214384148-214384148|G/-|frameshift_variant	42.47446043378293	0.39123495718708534	6				NaN	NaN	0	NaN	12183	3979	16162
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16165	40.669	NaN	8392.2	30	0	1149.2	0.106			+	33533	RLANDQSI	8	74	458.7467297968553	915.4789066605106	2	458.7477722167969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RLANDQSI_	REV__ENSG00000142669|ENST00000270792|SH3BGRL3	57.81127852772723	0.5234495074909924	6				NaN	NaN	0	NaN	12184	3979	16162
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16166	40.671	NaN	8165.1	30	0	549.45	0.106			+	50989	YIPLYPSQI	9	81	547.298447562931	1092.5823421926618	2	547.7997436523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YIPLYPSQI_	REV__ENSG00000112282|ENST00000368068|MED23;REV__ENST00000479213.1_1_6:131914123-131917288:-|nuORF;REV__MED23|p.H1213Mfs*26|1|0.32|ENSG00000112282|chr6:131591362-131591362|G/-|frameshift_variant;REV__nc|ENSG00000112282|Q9ULK4-3|MED23;REV__nc|ENSG00000112282|Q9ULK4-4|MED23;REV__nc|ENSG00000112282|Q9ULK4-5|MED23	51.19269402634007	0.2889735674168909	6				NaN	NaN	0	NaN	12185	3979	16162
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16167	40.673	NaN	2510.6	30	0	582.63	0.106			+	-1	KMMMNRKW	8	63	578.7745962533218	1155.5346395734434	2	578.7721557617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Oxidation (M)	_KMM(Oxidation (M))M(Oxidation (M))NRKW_	REV__DNAJC14|p.G80Vfs*176|1|0.17|ENSG00000135392|chr12:55828420-55828420|C/-|frameshift_variant;REV__ENST00000357606.7_1_12:56221676-56222300:-|nuORF	38.80614096846853	0.6637206697844082	6				NaN	NaN	0	NaN	12186	3979	16162
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16168	40.674	NaN	2068.5	30	0	240.04	0.032			+	-1	CCCDDEHD	8	54	384.77200740938696	NaN	0	384.77197265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term),3 Carbamidomethyl (C)	_(Acetyl (Protein N-term))C(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))DDEHD_	REV__ENSG00000198854|ENST00000368775|C1orf68	3.4100154012096215	1.7418937515398478	6				NaN	NaN	0	NaN	12187	3979	16162
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16169	40.675	NaN	1648.5	30	0	200.36	0.138	+			46750	VGSIITSVV	9	52	437.76593017578125	NaN	0	437.76593017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VGSIITSVV_	TM6SF1|p.M149T|1|0.43|ENSG00000136404|chr15:83121968-83121968|T/C|missense_variant	24.20275056022122	0.35506675290109213	6				NaN	NaN	0	NaN	12188	3979	16162
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16186	40.711	NaN	18281	30	0	3478.6	0.214				-1	 	0	88	536.3226881443529	1070.6308233555058	2	536.3245239257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12202	3982	16185
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16187	40.715	NaN	14806	30	0	1685.2	0.106	+			8305	EAIRISPTF	9	70	517.2872492143457	NaN	0	517.2874755859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EAIRISPTF_	ENSG00000147162|ENST00000373719|OGT;nc|ENSG00000147162|O15294-2|OGT;nc|ENSG00000147162|O15294-3|OGT;nc|ENSG00000147162|O15294-4|OGT	146.78539889680295	0.0014292327921901949	6				NaN	NaN	0	NaN	12203	3982	16185
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16188	40.717	NaN	9137.8	30	0	769.92	0.106			+	-1	AEEKAGEHTKM	11	79	623.7903632286665	1245.5661735241329	2	623.79248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_AEEKAGEHTKM(Oxidation (M))_	REV__ENSG00000189120|ENST00000536300|SP6	46.45678178249821	0.46959456050452836	6				NaN	NaN	0	NaN	12204	3982	16185
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16189	40.719	NaN	9542.6	30	0	883.38	0.106	+			3435	ASQLGIFISK	10	76	532.3097041895344	1062.6048554458687	2	532.3109130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASQLGIFISK_	ENSG00000120509|ENST00000239666|PDZD11;nc|ENSG00000120509|Q5EBL8-2|PDZD11	89.56079334093651	0.1335884292564383	6				NaN	NaN	0	NaN	12205	3982	16185
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16190	40.72	NaN	4929.2	30	0	529.49	0.106			+	-1	MQPEMQLIMQ	10	73	648.785483487375	1295.55641404155	2	648.7871704101562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	3 Oxidation (M)	_M(Oxidation (M))QPEM(Oxidation (M))QLIM(Oxidation (M))Q_	REV__chr10:53026127-53029911|183|15.51|0.0|20.57|-|1|TE_info:HERV30-int,HERV30-int_dup42,ERV1,LTR,acceptor,-,53025889,53026127|None,LINC02672|1	44.377184641726394	0.5088115166961078	6				NaN	NaN	0	NaN	12206	3982	16185
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16191	40.722	NaN	6875.9	30	0	945.61	0.035	+			33228	RFTLGSPLT	9	65	496.2855563195199	NaN	0	496.2857360839844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RFTLGSPLT_	ENSG00000072736|ENST00000346183|NFATC3;ENST00000379165.8_1_16:68119584-68225707:+|nuORF;ENST00000553077.5_1_16:68118971-68225707:+|nuORF;ENST00000563288.5_1_16:68120670-68248329:+|nuORF;ENST00000563319.5_1_16:68118971-68248329:+|nuORF;ENST00000569766.5_1_16:68118971-68260371:+|nuORF;nc|ENSG00000072736|Q12968-2|NFATC3;nc|ENSG00000072736|Q12968-3|NFATC3;nc|ENSG00000072736|Q12968-4|NFATC3;nc|ENSG00000072736|Q12968-5|NFATC3;nc|ENSG00000072736|Q12968-6|NFATC3;NFATC3|p.G218Afs*38|1|0.32|ENSG00000072736|chr16:68122532-68122532|G/-|frameshift_variant;NFATC3|p.L634Sfs*2|1|0.27|ENSG00000072736|chr16:68174493-68174494|-/T|frameshift_variant	56.43379154798735	0.16452882468284893	6				NaN	NaN	0	NaN	12207	3982	16185
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16192	40.723	NaN	5452.8	30	0	354.33	0.14			+	-1	VFAMGRLFC	9	71	530.259704135395	1058.50485533759	2	530.2617797851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_VFAM(Oxidation (M))GRLFC_	REV__ENSG00000136048|ENST00000258534|DRAM1;REV__nc|ENSG00000136048|Q8N682-2|DRAM1	35.200714571348534	0.47427825964483533	6				NaN	NaN	0	NaN	12208	3982	16185
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16207	40.756	NaN	13025	30	0	1576.8	0.214			+	26363	LTCLLGGKQC	10	90	546.7798267990446	1091.545100664889	2	547.2858276367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_LTC(Carbamidomethyl (C))LLGGKQC_	REV__ENSG00000197858|ENST00000355091|GPAA1;REV__ENST00000527653.1_1_8:145139038-145139470:+|nuORF;REV__ENST00000529638.1_1_8:145139098-145139832:+|nuORF;REV__nc|ENSG00000197858|O43292-2|GPAA1	68.78682469695295	0.28723163847957256	6				NaN	NaN	0	NaN	12220	3985	16206
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16208	40.759	NaN	8198.8	30	0	1179.8	0.106			+	27493	MMGQLHCVC	9	74	511.2078962439449	1020.4012395546898	2	511.2096862792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MMGQLHCVC_	REV__ENST00000504194.5_1_4:3387770-3387881:+|nuORF	33.51558372728122	0.4900267029546261	6				NaN	NaN	0	NaN	12221	3985	16206
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16209	40.761	NaN	5176.5	30	0	985.04	0.106			+	203	AALIGLALHE	10	50	336.5344378546052	NaN	0	336.5343322753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AALIGLALHE_	REV__ENST00000318006.9_1_15:42452801-42452900:-|nuORF	21.9598887501803	0.4201028297492154	6				NaN	NaN	0	NaN	12222	3985	16206
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16210	40.763	NaN	3837.6	30	0	454.06	0.106	+			3252	ASLGFLVAK	9	71	453.27517037847815	904.5357878237563	2	453.2762145996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASLGFLVAK_	ENSG00000197363|ENST00000359971|ZNF517;ZNF517|p.C121Afs*105|2|0.1|ENSG00000197363|chr8:144807272-144807272|G/-|frameshift_variant	139.97047562133406	0.010493916756945389	6				NaN	NaN	0	NaN	12223	3985	16206
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16211	40.765	NaN	2618.9	30	0	460.29	0.106				-1	 	0	50	433.75145720959785	865.4883614859957	2	433.75262451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12224	3985	16206
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16212	40.767	NaN	4116.4	30	0	321.22	0.034				-1	 	0	56	484.26456083428104	483.25728436768105	1	486.2633056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12225	3985	16206
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16213	40.767	NaN	5576.5	30	0	492.32	0.142			+	38504	SSAVRDSLIKL	11	77	594.8515078641524	1187.6884627951047	2	594.8533325195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SSAVRDSLIKL_	REV__ENSG00000147059|ENST00000374906|SPIN2A;REV__ENSG00000186787|ENST00000434397|SPIN2B	40.05817265558897	0.5571470695993369	6				NaN	NaN	0	NaN	12226	3985	16206
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16225	40.886	NaN	30390	30	0	4938.8	0.214	+			16672	HILFCLLL	8	83	486.29078842151404	970.5670239098281	2	486.29193115234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HILFCLLL_	CH25H|p.L125P|1|0.22|ENSG00000138135|chr10:89206919-89206919|A/G|missense_variant;ENSG00000138135|ENST00000371852|CH25H	67.3271909547111	0.42924334279516513	6				NaN	NaN	0	NaN	12235	3988	16224
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16226	40.89	NaN	13659	30	0	6335	0.106			+	8451	EARRLGASPK	10	77	542.8146338314581	1083.614714729716	2	542.816650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EARRLGASPK_	REV__ENST00000354336.7_1_22:21271864-21272434:+|nuORF	49.46582953369473	0.46192220282894864	6				NaN	NaN	0	NaN	12236	3988	16224
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16227	40.892	NaN	7882.9	30	0	943.11	0.106	+			27824	MSRCLLKSN	9	69	526.2732731927259	1050.5319934522518	2	526.2747192382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MSRCLLKSN_	ENST00000333010.6_1_5:146971228-146981327:-|nuORF	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	12237	3988	16224
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16228	40.893	NaN	8517.6	30	0	851.29	0.106	+			44189	TRAQEVLK	8	66	472.78021783685534	943.5458827405107	2	472.781494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TRAQEVLK_	tr|U7SM87|U7SM87_FUSNUBeta-lysine5,6-aminomutaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01864PE=4SV=1	118.74307786436346	0.2363524257139583	6				NaN	NaN	0	NaN	12238	3988	16224
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16229	40.895	NaN	6367	30	0	2055.9	0.106			+	29565	PFANGNEKL	9	59	495.2560708233116	988.4975887134232	2	495.25738525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PFANGNEKL_	REV__ENSG00000189057|ENST00000343597|FAM111B;REV__nc|ENSG00000189057|Q6SJ93-2|FAM111B	39.252832667884924	0.4290233611298554	6				NaN	NaN	0	NaN	12239	3988	16224
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16230	40.897	NaN	7778.2	30	0	2083.4	0.106				-1	 	0	67	501.3217616076867	1000.6289702821734	2	501.3232421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12240	3988	16224
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16231	40.899	NaN	10217	30	0	2752.1	0.035			+	5481	AVAAKKAPPE	10	64	491.29057850123206	980.5666040692641	2	491.291748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AVAAKKAPPE_	REV__ENSG00000058673|ENST00000367210|ZC3H11A;REV__ENST00000495527.5_2_1:203819629-203821524:+|nuORF	37.81151784470057	0.569310847604193	6				NaN	NaN	0	NaN	12241	3988	16224
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16249	40.936	NaN	16755	30	0	1232.1	0.214				-1	 	0	77	480.2908859392856	958.5672189453712	2	480.2919616699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12256	3991	16248
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16250	40.94	NaN	8781.1	30	0	996.38	0.106				-1	GRINIMKMAI	10	78	581.8252191498148	1161.6358853664294	2	581.8272094726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_GRINIMKM(Oxidation (M))AI_	L1PA5_dup2765|chr4:69723015-69726028:+|1.903650506224423|0.171219590839865|3.47|472.0|70|3|sense	49.44154591367651	0.46214596422418036	6				NaN	NaN	0	NaN	12257	3991	16248
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16251	40.942	NaN	14081	30	0	4060.9	0.106	+			27957	MVIYFMGAI	9	78	530.7655893760266	1059.516625818853	2	530.7675170898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))VIYFMGAI_	ENSG00000237521|ENST00000456448|OR7E24	72.61992398637584	0.12946007194610515	6				NaN	NaN	0	NaN	12258	3991	16248
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16252	40.944	NaN	4047.2	30	0	547.94	0.106	+			50971	YIIYGMYF	8	70	535.2571473416327	1068.4997417500654	2	535.2587280273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YIIYGMYF_	ENSG00000103152|ENST00000356432|MPG;nc|ENSG00000103152|P29372-2|MPG;nc|ENSG00000103152|P29372-5|MPG;nc|ENSG00000103152|P29372|MPG	44.53106598305862	0.628196326904373	6				NaN	NaN	0	NaN	12259	3991	16248
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16253	40.945	NaN	11600	30	0	1243	0.106			+	38318	SREMFLIGCK	10	78	592.3015330902462	1182.5885132472922	2	592.3035888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SREMFLIGCK_	REV__ENSG00000152433|ENST00000282282|ZNF547;REV__nc|ENSG00000256060|Q8IVP9-2|ZNF547	67.49366992349736	0.29779660154124327	6				NaN	NaN	0	NaN	12260	3991	16248
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16254	40.947	NaN	8163	30	0	861.97	0.035	+			49594	VYGIYFAVI	9	84	522.7937657221132	1043.5729785110263	2	523.2985229492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VYGIYFAVI_	SLC19A3|p.S444I|1|0.46|ENSG00000135917|chr2:227687557-227687557|C/A|missense_variant	37.15910966729921	0.4535818937225704	6				NaN	NaN	0	NaN	12261	3991	16248
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16255	40.948	NaN	1713.2	30	0	132.86	0.139				-1	 	0	53	438.76703251129396	875.519512089388	2	438.768310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12262	3991	16248
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16269	40.979	NaN	45483	30	0	9897.3	0.214	+			28544	NIPRDTVNL	9	96	521.2884179799702	1040.5622830267403	2	521.2901000976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NIPRDTVNL_	ENSG00000162998|ENST00000295113|FRZB;FRZB|p.S241Kfs*38|1|0.02|ENSG00000162998|chr2:182838485-182838486|-/ATAACTACTTT|frameshift_variant	56.72105179125745	0.24094814563026265	6				NaN	NaN	0	NaN	12273	3994	16268
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16270	40.982	NaN	23455	30	0	3073.1	0.106			+	47510	VQMRCKVL	8	70	496.7725867931045	991.530620653009	2	496.77386474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_VQM(Oxidation (M))RCKVL_	REV__ENSG00000075415|ENST00000552981|SLC25A3;REV__ENST00000546766.5_1_12:98989167-98989365:+|nuORF;REV__ENST00000546766.5_1_12:98989476-98995303:+|nuORF;REV__ENST00000547908.1_1_12:98989476-98991822:+|nuORF;REV__nc|ENSG00000075415|Q00325|SLC25A3;REV__SLC25A3|p.A215Hfs*11|1|0.42|ENSG00000075415|chr12:98598698-98598698|A/-|frameshift_variant	71.37791200682192	0.3954169775488141	6				NaN	NaN	0	NaN	12274	3994	16268
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16271	40.984	NaN	14068	30	0	1664.2	0.106				-1	CCLCRYMS	8	86	518.1971724985061	1034.3797920638121	2	518.1990356445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_CCLC(Carbamidomethyl (C))RYMS_	ENST00000420783.7_1_3:49051556-49052718:+|nuORF	60.29395666154354	0.49887135096048313	6				NaN	NaN	0	NaN	12275	3994	16268
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16272	40.986	NaN	3537.8	30	0	203.21	0.106				-1	 	0	62	347.19776234012545	692.3809717470509	2	347.1984558105469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12276	3994	16268
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16273	40.988	NaN	5181	30	0	938.13	0.106	+			49562	VYDQQREVY	9	73	600.2882534851121	1198.5619540370242	2	600.2901611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VYDQQREVY_	CEP55|p.D247Ifs*9|1|0.25|ENSG00000138180|chr10:93516987-93516987|A/-|frameshift_variant;ENSG00000138180|ENST00000371485|CEP55;nc|ENSG00000138180|Q53EZ4-2|CEP55	32.81241826257853	0.4965981579233955	6				NaN	NaN	0	NaN	12277	3994	16268
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16274	40.99	NaN	3353	30	0	380.43	0.033				-1	 	0	60	451.78008990596396	901.545626878728	2	451.7812805175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12278	3994	16268
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16275	40.99	NaN	4285.5	30	0	537.88	0.141				-1	 	0	74	559.2493251598195	558.2420486932194	1	559.2513427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12279	3994	16268
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16290	41.024	NaN	15426	30	0	2451.7	0.214			+	30432	PYKHYSAGSF	10	82	578.7745962533218	1155.5346395734434	2	578.776611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PYKHYSAGSF_	REV__ENSG00000186952|ENST00000455884|TMEM232;REV__ENST00000508571.6_1_5:109668587-109961153:-|nuORF;REV__ENST00000512003.7_1_5:109946270-109963572:-|nuORF;REV__ENST00000515518.6_1_5:109760554-109978041:-|nuORF;REV__nc|ENSG00000186952|C9JQI7-2|TMEM232;REV__TMEM232|p.N394Ifs*13|3|0.32|ENSG00000186952|chr5:110605204-110605204|T/-|frameshift_variant	74.25504064058377	0.24255678544297835	6				NaN	NaN	0	NaN	12291	3997	16289
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16291	41.027	NaN	9693.6	30	0	1635.2	0.106			+	13618	GLYLGSIMK	9	65	491.27536776836587	NaN	0	491.2752990722656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GLYLGSIMK_	REV__ENSG00000156510|ENST00000354624|HKDC1;REV__nc|ENSG00000156510|Q2TB90-2|HKDC1;REV__nc|ENSG00000156510|Q2TB90-3|HKDC1	90.36981228632155	0.04085092656593507	6				NaN	NaN	0	NaN	12292	3997	16289
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16292	41.029	NaN	4293.5	30	0	587.44	0.106	+			28557	NKAIKKRG	8	63	457.79825596827106	913.5819590033421	2	457.7994384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NKAIKKRG_	ENSG00000156515|ENST00000359426|HK1;ENST00000494253.1_1_10:71098016-71144300:+|nuORF;nc|ENSG00000156515|P19367-2|HK1;nc|ENSG00000156515|P19367-3|HK1;nc|ENSG00000156515|P19367-4|HK1	38.80614096846853	0.6637206697844082	6				NaN	NaN	0	NaN	12293	3997	16289
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16293	41.031	NaN	7946.8	30	0	730.96	0.106			+	21818	KREGDGVRINR	11	82	650.3651041120269	1298.7156552908536	2	650.3672485351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KREGDGVRINR_	REV__ENST00000430771.2_1_12:6712170-6712293:-|nuORF	75.04331003522576	0.19369523587789836	6				NaN	NaN	0	NaN	12294	3997	16289
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16294	41.033	NaN	4251.7	30	0	514.53	0.106	+			26420	LTFVFGANVE	10	74	548.7876728457036	1095.560792758207	2	548.7898559570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LTFVFGANVE_	ENSG00000007062|ENST00000447510|PROM1;nc|ENSG00000007062|O43490-2|PROM1;nc|ENSG00000007062|O43490-3|PROM1;nc|ENSG00000007062|O43490-4|PROM1;nc|ENSG00000007062|O43490-5|PROM1;nc|ENSG00000007062|O43490-6|PROM1;nc|ENSG00000007062|O43490-7|PROM1	39.252832667884924	0.5560298534376815	6				NaN	NaN	0	NaN	12295	3997	16289
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16295	41.035	NaN	5108.6	30	0	407.32	0.042			+	-1	IHFDCCSRKKE	11	87	740.3454878269716	1478.6764227207432	2	740.3468017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Carbamidomethyl (C)	_IHFDC(Carbamidomethyl (C))C(Carbamidomethyl (C))SRKKE_	REV__ENST00000406316.6_3_2:51256197-51256272:-|nuORF	41.42661286455405	0.5384226294179143	6				NaN	NaN	0	NaN	12296	3997	16289
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16296	41.035	NaN	4846.8	30	0	579.62	0.144			+	-1	EFNLHSLLM	9	78	560.2771747680855	1118.539796602971	2	560.27880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_EFNLHSLLM(Oxidation (M))_	REV__GORASP2|p.T418Lfs*74|1|0.24|ENSG00000115806|chr2:170966017-170966017|C/-|frameshift_variant	44.377184641726394	0.36891676396732553	6				NaN	NaN	0	NaN	12297	3997	16289
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16310	41.067	NaN	11087	30	0	1921.1	0.214				-1	MILEFLVY	8	69	535.2857816570767	1068.5570103809532	2	535.2880249023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))MILEFLVY_	ENST00000367456.5_1_6:149699241-149699277:+|nuORF	38.80614096846853	0.6637206697844082	6				NaN	NaN	0	NaN	12308	4000	16309
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16311	41.07	NaN	10811	30	0	2291.5	0.106	+			25203	LMKRLRNIM	9	80	587.8490061576949	1173.6834593821898	2	587.8511962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LMKRLRNIM_	ENSG00000197653|ENST00000673944|DNAH10;nc|ENSG00000197653|Q8IVF4|DNAH10	71.29570347882199	0.13518600952103718	6				NaN	NaN	0	NaN	12309	4000	16309
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16312	41.072	NaN	6900.5	30	0	1381.5	0.106			+	44493	TSSGFLGPLH	10	73	508.2631079977474	1014.5116630622948	2	508.26446533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TSSGFLGPLH_	REV__ENSG00000134815|ENST00000328771|DHX34;REV__ENST00000486327.6_1_19:47880370-47884327:+|nuORF	49.536043120802724	0.461275219792494	6				NaN	NaN	0	NaN	12310	4000	16309
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16313	41.074	NaN	5033.5	30	0	2645.7	0.106			+	31159	QGIQQPLATIE	11	71	599.3276962546665	1196.640839576133	2	599.3292846679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QGIQQPLATIE_	REV__ENSG00000136141|ENST00000389797|LRCH1;REV__ENST00000443945.6_1_13:47127426-47279607:+|nuORF;REV__nc|ENSG00000136141|Q9Y2L9-2|LRCH1;REV__nc|ENSG00000136141|Q9Y2L9|LRCH1	29.170058357718403	0.683821074385409	6				NaN	NaN	0	NaN	12311	4000	16309
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16314	41.076	NaN	6094.2	30	0	446.93	0.106	+			9187	EGQIYQLLN	9	71	539.2846342849923	1076.5547156367845	2	539.287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EGQIYQLLN_	FAM81A|p.S183Y|1|0.39|ENSG00000157470|chr15:59508867-59508867|C/A|missense_variant	60.11826168202944	0.21262886028301267	6				NaN	NaN	0	NaN	12312	4000	16309
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16315	41.078	NaN	7448.9	30	0	1155.8	0.036	+			34415	RTTEGRRRA	9	78	551.814701600707	1101.614850268214	2	552.318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RTTEGRRRA_	ENSG00000197309|ENST00000641351|OR10D3	69.6276240434122	0.14239879520340665	6				NaN	NaN	0	NaN	12313	4000	16309
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16316	41.079	NaN	5289.6	30	0	610.71	0.144	+			28680	NLWMEILYLK	10	73	661.8619824729328	1321.7094120126656	2	662.3653564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NLWMEILYLK_	ENSG00000116668|ENST00000367500|SWT1	45.97224482568171	0.49411383603842696	6				NaN	NaN	0	NaN	12314	4000	16309
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16329	41.108	NaN	9357.1	30	0	542.61	0.215	+			51320	YSLDHISSL	9	83	517.7628814931771	1033.5112100531542	2	517.7616577148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YSLDHISSL_	ENSG00000030066|ENST00000378460|NUP160;ENST00000527126.1_1_11:47843172-47843701:-|nuORF;nc|ENSG00000030066|Q12769-3|NUP160;nc|ENSG00000030066|Q12769|NUP160	116.90359126533652	0.02307425081617795	6				NaN	NaN	0	NaN	12324	4003	16328
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16330	41.112	NaN	7071.9	30	0	1254.9	0.106			+	-1	MQWADRAAVSS	11	69	619.2855291958061	1236.5565054584122	2	619.2872924804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_M(Oxidation (M))QWADRAAVSS_	REV__ENSG00000136813|ENST00000684092|ECPAS;REV__nc|ENSG00000136813|Q5VYK3|ECPAS	47.95952297671804	0.44903247279694136	6				NaN	NaN	0	NaN	12325	4003	16328
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16331	41.114	NaN	7044.1	30	0	893.96	0.106			+	11584	FPPHPPQLF	9	69	540.2882177527022	1078.5618825722042	2	540.290283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FPPHPPQLF_	REV__ENST00000326793.10_2_3:194995885-194995939:-|nuORF	60.29395666154354	0.21116425950210296	6				NaN	NaN	0	NaN	12326	4003	16328
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16332	41.116	NaN	4853	30	0	1059.8	0.106			+	14418	GTAPLVILSH	10	39	336.5344378546052	NaN	0	336.53436279296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTAPLVILSH_	REV__ENST00000444374.1_1_9:92316696-92316852:+|nuORF	21.9598887501803	0.4201028297492154	6				NaN	NaN	0	NaN	12327	4003	16328
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16333	41.117	NaN	3254.7	30	0	376.32	0.106			+	51084	YLQQLTAL	8	59	475.2704961919929	NaN	0	475.2705383300781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YLQQLTAL_	REV__ENSG00000161996|ENST00000293879|WDR90;REV__ENST00000546516.5_1_16:705169-713132:+|nuORF;REV__WDR90|p.A1071Pfs*40|1|0.36|ENSG00000161996|chr16:660080-660080|G/-|frameshift_variant;REV__WDR90|p.P1013Qfs*98|1|0.36|ENSG00000161996|chr16:659106-659106|C/-|frameshift_variant	45.9519527083369	1.7418937515398478	6				NaN	NaN	0	NaN	12328	4003	16328
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16334	41.119	NaN	18255	30	0	1522.6	0.106				-1	 	0	81	512.2832335457548	1022.5519141583096	2	512.2850341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12329	4003	16328
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16335	41.121	NaN	3090.6	30	0	741.29	0.034	+			32330	QTTEHIVK	8	66	478.2647279017793	954.5149028703586	2	478.2656555175781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QTTEHIVK_	ENSG00000067704|ENST00000366922|IARS2;ENST00000490891.1_1_1:220287805-220307963:+|nuORF;IARS2|p.Y609Sfs*33|1|0.05|ENSG00000067704|chr1:220126831-220126832|-/CAGAAAATGAA|frameshift_variant	54.776311868738084	0.5534952410049249	6				NaN	NaN	0	NaN	12330	4003	16328
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16350	41.152	NaN	5779.7	30	0	575.62	0.214	+			50988	YIPEQRADL	9	75	552.7885563757493	1103.5625598182985	2	552.7916870117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YIPEQRADL_	ENST00000514654.5_1_3:130694228-130698117:+|nuORF	32.81241826257853	0.4965981579233955	6				NaN	NaN	0	NaN	12342	4006	16349
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16351	41.156	NaN	4172.3	30	0	401.4	0.106	+			4165	ATFFGEVVK	9	65	499.2698232931001	996.5250936530002	2	499.2716979980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATFFGEVVK_	ENSG00000183527|ENST00000331573|PSMG1;nc|ENSG00000183527|O95456-2|PSMG1;PSMG1|p.T194Hfs*13|1|0.12|ENSG00000183527|chr21:39178524-39178524|T/-|frameshift_variant	72.87924865735499	0.12833875048249987	6				NaN	NaN	0	NaN	12343	4006	16349
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16352	41.158	NaN	2772.3	30	0	507.82	0.106				-1	 	0	53	433.75145720959785	865.4883614859957	2	433.75262451171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12344	4006	16349
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16353	41.16	NaN	4217.9	30	0	329.71	0.106	+			43195	TEVGPRFEL	9	76	524.2756976463901	1046.53684235958	2	524.27685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TEVGPRFEL_	ENSG00000136718|ENST00000259239|IMP4;ENST00000460766.5_1_2:131100637-131104038:+|nuORF;ENST00000475074.1_1_2:131103527-131104038:+|nuORF	68.84614121027924	0.14577793175421136	6				NaN	NaN	0	NaN	12345	4006	16349
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16354	41.162	NaN	3091.9	30	0	805.84	0.106	+			32583	QYAVLGAGLY	10	67	527.7808964584071	1053.5472399836142	2	527.7830810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QYAVLGAGLY_	ENSG00000132259|ENST00000379936|CNGA4;nc|ENSG00000132259|Q8IV77-2|CNGA4	44.116797842482775	0.5112108506279902	6				NaN	NaN	0	NaN	12346	4006	16349
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16355	41.163	NaN	4849.9	30	0	900.17	0.036	+			13793	GQIMVWMET	9	78	547.7565419694262	1093.4985310056522	2	547.7565307617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GQIMVWMET_	ACOT12|p.A207V|1|0.33|ENSG00000172497|chr5:81347807-81347807|G/A|missense_variant	27.882242232435846	0.5426732730940306	6				NaN	NaN	0	NaN	12347	4006	16349
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16356	41.164	NaN	1417.8	30	0	122.33	0.144	+			33804	RQNGDDPLLTY	11	65	646.3201293945312	NaN	0	646.3201293945312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RQNGDDPLLTY_	ENSG00000160789|ENST00000368300|LMNA;ENST00000496738.5_1_1:156104620-156106879:+|nuORF;nc|ENSG00000160789|P02545-2|LMNA;nc|ENSG00000160789|P02545-3|LMNA;nc|ENSG00000160789|P02545-4|LMNA;nc|ENSG00000160789|P02545-5|LMNA;nc|ENSG00000160789|P02545-6|LMNA	35.15202426646627	0.40875833226131825	6				NaN	NaN	0	NaN	12348	4006	16349
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16368	41.191	NaN	17139	30	0	2679.8	0.214			+	51376	YTKRMNGM	8	84	516.7336811280811	1031.4528093229621	2	516.7354125976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_YTKRM(Oxidation (M))NGM(Oxidation (M))_	REV__ENSG00000116285|ENST00000377482|ERRFI1	73.97473282117947	0.3737790450121076	6				NaN	NaN	0	NaN	12357	4009	16367
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16369	41.195	NaN	6305.3	30	0	498.97	0.106	+			36168	SELEKTFNL	9	71	540.7802138228284	1079.5458747124567	2	540.78369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SELEKTFNL_	ENSG00000067066|ENST00000340126|SP100;ENSG00000185404|ENST00000415673|SP140L;nc|ENSG00000067066|P23497-2|SP100;nc|ENSG00000067066|P23497-3|SP100;nc|ENSG00000067066|P23497-5|SP100;nc|ENSG00000067066|P23497-6|SP100;nc|ENSG00000067066|P23497-7|SP100;nc|ENSG00000067066|P23497|SP100;nc|ENSG00000185404|Q9H930-1|SP140L;nc|ENSG00000185404|Q9H930-2|SP140L;nc|ENSG00000185404|Q9H930-3|SP140L;SP140L|p.F492Lfs*17|1|0.46|ENSG00000185404|chr2:230401414-230401414|T/-|frameshift_variant	54.722347961057174	0.257609425301511	6				NaN	NaN	0	NaN	12358	4009	16367
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16370	41.197	NaN	4110.7	30	0	391.65	0.106			+	17362	IALKRHVR	8	62	496.82722873722855	991.6399045412571	2	496.8287048339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IALKRHVR_	REV__AHCTF1|p.E1870Kfs*19|1|0.27|ENSG00000153207|chr1:246850426-246850426|T/-|frameshift_variant;REV__AHCTF1|p.G1113Wfs*13|1|0.07|ENSG00000153207|chr1:246867281-246867282|-/A|frameshift_variant;REV__ENSG00000153207|ENST00000648844|AHCTF1;REV__ENST00000420969.1_1_2:162360026-162361742:-|nuORF;REV__ENST00000470300.5_1_1:247027247-247061635:-|nuORF;REV__ENST00000483900.1_1_1:247015289-247040365:-|nuORF;REV__nc|ENSG00000153207|Q8WYP5-2|AHCTF1;REV__nc|ENSG00000153207|Q8WYP5-3|AHCTF1	44.53106598305862	0.628196326904373	6				NaN	NaN	0	NaN	12359	4009	16367
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16371	41.199	NaN	6353.1	30	0	759.07	0.106				-1	KCIFNVMKK	9	74	592.3198814486834	1182.6252099641667	2	592.3221435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C),Oxidation (M)	_KC(Carbamidomethyl (C))IFNVM(Oxidation (M))KK_	ENSG00000132915|ENST00000255266|PDE6A;PDE6A|p.A811Gfs*10|1|0.37|ENSG00000132915|chr5:149863193-149863193|G/-|frameshift_variant;PDE6A|p.R582Afs*19|1|0.45|ENSG00000132915|chr5:149886360-149886361|-/T|frameshift_variant;PDE6A|p.T174Dfs*24|1|0.3|ENSG00000132915|chr5:149934674-149934675|-/T|frameshift_variant	55.50420428727701	0.2510918378945873	6				NaN	NaN	0	NaN	12360	4009	16367
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16372	41.2	NaN	2321	30	0	256.66	0.106			+	36348	SESSRKLVP	9	66	501.7827833315687	1001.5510137299374	2	501.7847900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SESSRKLVP_	REV__ENSG00000005483|ENST00000311117|KMT2E;REV__KMT2E|p.K873Nfs*8|4|0.41|ENSG00000005483|chr7:105106538-105106538|A/-|frameshift_variant;REV__KMT2E|p.L1610Cfs*16|1|0.09|ENSG00000005483|chr7:105112580-105112580|T/-|frameshift_variant;REV__KMT2E|p.R802Kfs*8|1|0.35|ENSG00000005483|chr7:105105640-105105641|-/A|frameshift_variant;REV__KMT2E|p.T553Lfs*7|1|0.44|ENSG00000005483|chr7:105091244-105091244|A/-|frameshift_variant;REV__KMT2E|p.T553Nfs*4|1|0.43|ENSG00000005483|chr7:105091243-105091244|-/A|frameshift_variant;REV__nc|ENSG00000005483|Q8IZD2-2|KMT2E;REV__nc|ENSG00000005483|Q8IZD2-3|KMT2E;REV__nc|ENSG00000005483|Q8IZD2-4|KMT2E;REV__nc|ENSG00000005483|Q8IZD2-5|KMT2E;REV__nc|ENSG00000005483|Q8IZD2-6|KMT2E;REV__nc|ENSG00000005483|Q8IZD2-7|KMT2E;REV__nc|ENSG00000005483|Q8IZD2-8|KMT2E	51.33545320467046	0.2872990594074956	6				NaN	NaN	0	NaN	12361	4009	16367
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16373	41.202	NaN	2060.4	30	0	179.82	0.106	+			7999	DTGWVKAAI	9	57	480.76243044278584	NaN	0	480.7627258300781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DTGWVKAAI_	ACSM4|p.D331Rfs*3|1|0.19|ENSG00000215009|chr12:7320788-7320789|-/A|frameshift_variant;ACSM4|p.F429Sfs*18|1|0.37|ENSG00000215009|chr12:7323537-7323537|T/-|frameshift_variant;ENSG00000215009|ENST00000399422|ACSM4	40.77816245573522	0.2702456086868081	6				NaN	NaN	0	NaN	12362	4009	16367
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16374	41.204	NaN	3011.2	30	0	373.52	0.037			+	33131	REQELLNTF	9	67	575.2991333007812	NaN	0	575.2991333007812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_REQELLNTF_	REV__ENSG00000118407|ENST00000237172|FILIP1;REV__FILIP1|p.I519*|1|0.32|ENSG00000118407|chr6:75314277-75314277|T/-|frameshift_variant;REV__nc|ENSG00000118407|Q7Z7B0-2|FILIP1	37.81151784470057	0.28666463014928195	6				NaN	NaN	0	NaN	12363	4009	16367
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16388	41.234	NaN	3763.8	30	0	677.97	0.213			+	11207	FHTSGGGMWPF	11	77	620.2657366740787	1238.5169204149572	2	620.2681884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_FHTSGGGM(Oxidation (M))WPF_	REV__ENSG00000152463|ENST00000378228|OLAH;REV__nc|ENSG00000152463|Q9NV23-2|OLAH;REV__OLAH|p.F98Lfs*15|2|0.41|ENSG00000152463|chr10:15061849-15061849|T/-|frameshift_variant;REV__OLAH|p.K164Sfs*10|2|0.24|ENSG00000152463|chr10:15065666-15065666|C/-|frameshift_variant;REV__OLAH|p.N251Ifs*6|1|0.13|ENSG00000152463|chr10:15073182-15073183|-/TTGTATTC|frameshift_variant	40.77816245573522	0.5472954108598816	6				NaN	NaN	0	NaN	12374	4012	16387
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16389	41.237	NaN	5505.2	30	0	384.73	0.106	+			43071	TELRGTWSL	9	73	531.7803816074551	1061.54621028171	2	531.782958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TELRGTWSL_	ENSG00000145384|ENST00000274024|FABP2;FABP2|p.E86Q|1|0.24|ENSG00000145384|chr4:119319628-119319628|C/G|missense_variant	63.53385203322761	0.18415635464017938	6				NaN	NaN	0	NaN	12375	4012	16387
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16390	41.239	NaN	4957.5	30	0	431.17	0.106	+			43271	TFESSHYLL	9	72	548.7692745989634	NaN	0	548.7692260742188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TFESSHYLL_	ENSG00000167986|ENST00000301764|DDB1;ENST00000414411.3_1_11:61081295-61081943:-|nuORF	60.97194046774394	0.14517358171632622	6				NaN	NaN	0	NaN	12376	4012	16387
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16391	41.241	NaN	2686.7	30	0	225.04	0.106			+	17869	IFVWGLLQ	8	61	488.28787991357416	974.5612068939483	2	488.2875671386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IFVWGLLQ_	REV__ENSG00000198743|ENST00000381151|SLC5A3	54.76467175910256	0.5536104764165384	6				NaN	NaN	0	NaN	12377	4012	16387
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16392	41.243	NaN	2047.2	30	0	189.56	0.106			+	37545	SLLVLKRE	8	56	479.3071422788046	956.5997316244092	2	479.30804443359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SLLVLKRE_	REV__ENSG00000196455|ENST00000356763|PIK3R4	51.33545320467046	0.5859736979383976	6				NaN	NaN	0	NaN	12378	4012	16387
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16393	41.245	NaN	2746.9	30	0	224.7	0.037				-1	MSEVEVPISN	10	70	560.7645275935015	NaN	0	560.7657470703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_M(Oxidation (M))SEVEVPISN_	ENST00000609297.1_1_20:62887953-62888055:+|nuORF	33.921630207806714	0.38879399011744475	6				NaN	NaN	0	NaN	12379	4012	16387
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16394	41.245	NaN	2888.1	30	0	360.27	0.14			+	5885	AVKPNKDKL	9	70	506.81172458469246	1011.6088962361849	2	506.8128356933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AVKPNKDKL_	REV__tr|U7SUB5|U7SUB5_FUSNUGlycerol-3-phosphatedehydrogenase[NAD(P)+]OS=FusobacteriumnucleatumCTI-5OX=1316586GN=gpsAPE=3SV=1	42.86426827375447	0.38666266728046506	6				NaN	NaN	0	NaN	12380	4012	16387
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16408	41.276	NaN	3563.1	30	0	469.21	0.215			+	47604	VRTAGSAPLF	10	63	509.7862768412103	1017.5580007492206	2	509.7879943847656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VRTAGSAPLF_	REV__ENST00000268483.7_1_16:72127358-72127508:-|nuORF	55.08391021199286	0.41055145962533396	6				NaN	NaN	0	NaN	12391	4015	16407
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16409	41.28	NaN	9333.8	30	0	2368.4	0.106			+	25073	LLLLYQQF	8	76	519.3052331910174	1036.5959134488346	2	519.306396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LLLLYQQF_	REV__ASXL3|p.P2037Hfs*43|1|0.33|ENSG00000141431|chr18:33745951-33745951|C/-|frameshift_variant;REV__ASXL3|p.V876Cfs*59|3|0.42|ENSG00000141431|chr18:33740022-33740022|A/-|frameshift_variant;REV__ENSG00000141431|ENST00000269197|ASXL3;REV__nc|ENSG00000141431|Q9C0F0-2|ASXL3	37.028477286268924	0.6747514403204248	6				NaN	NaN	0	NaN	12392	4015	16407
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16410	41.282	NaN	2122.1	30	0	123.75	0.106				-1	 	0	46	443.77003181299636	885.5255106927927	2	443.771240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12393	4015	16407
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16411	41.284	NaN	4077.2	30	0	638.02	0.106	+			27847	MTFGRVSDLGQ	11	78	605.7981195336771	1209.581686134154	2	605.800048828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MTFGRVSDLGQ_	ENSG00000108599|ENST00000225737|AKAP10	57.148748479083515	0.34890646465650643	6				NaN	NaN	0	NaN	12394	4015	16407
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16412	41.285	NaN	1635	30	0	92.676	0.106			+	38394	SRVTIELL	8	64	465.78251604436997	929.55047915554	2	466.28375244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SRVTIELL_	REV__ENSG00000005810|ENST00000544440|MYCBP2;REV__MYCBP2|p.C1064Ifs*31|1|0.09|ENSG00000005810|chr13:77211267-77211279|TTATCAGAAGGCA/-|frameshift_variant;REV__MYCBP2|p.G651Efs*24|1|0.04|ENSG00000005810|chr13:77257781-77257782|-/ATTAGTTTTT|frameshift_variant;REV__MYCBP2|p.K375Sfs*4|1|0.3|ENSG00000005810|chr13:77270014-77270014|T/-|frameshift_variant;REV__MYCBP2|p.N1867Tfs*9|1|0.15|ENSG00000005810|chr13:77171572-77171572|T/-|frameshift_variant;REV__MYCBP2|p.N3049*|1|0.11|ENSG00000005810|chr13:77097894-77097895|TT/-|frameshift_variant;REV__MYCBP2|p.P4047Qfs*26|2|0.35|ENSG00000005810|chr13:77067782-77067782|G/-|frameshift_variant;REV__MYCBP2|p.T1507Ffs*24|1|0.04|ENSG00000005810|chr13:77185189-77185190|-/TTGTAAA|frameshift_variant;REV__MYCBP2|p.T4311Pfs*37|1|0.14|ENSG00000005810|chr13:77059619-77059619|G/-|frameshift_variant;REV__MYCBP2|p.V3749*|1|0.12|ENSG00000005810|chr13:77081486-77081486|C/-|frameshift_variant;REV__nc|ENSG00000005810|O75592-2|MYCBP2	42.396135135203025	0.6414440140393314	6				NaN	NaN	0	NaN	12395	4015	16407
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16413	41.287	NaN	1935.6	30	0	104.68	0.036			+	28008	MVYREGETL	9	71	557.2681274414062	NaN	0	557.2681274414062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_M(Oxidation (M))VYREGETL_	REV__ENSG00000163933|ENST00000296292|RFT1;REV__ENST00000471158.1_1_3:53137921-53154019:-|nuORF	73.97473282117947	0.09202988758641674	6				NaN	NaN	0	NaN	12396	4015	16407
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16414	41.288	NaN	2846.9	30	0	346.62	0.14	+			19265	KAERYKPS	8	67	489.7731431154303	977.5317332976606	2	490.7747497558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KAERYKPS_	ENSG00000132854|ENST00000371153|KANK4;nc|ENSG00000132854|Q5T7N3-2|KANK4	27.882242232435846	0.7440473649773525	6				NaN	NaN	0	NaN	12397	4015	16407
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16428	41.319	NaN	6728.3	30	0	500.5	0.214			+	11374	FLLACHAQL	9	68	508.273096014232	1014.531639095264	2	508.2747802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FLLACHAQL_	REV__DNAH10|p.D3416Mfs*54|1|0.28|ENSG00000197653|chr12:123914871-123914871|C/-|frameshift_variant;REV__DNAH10|p.N2655Kfs*10|1|0.19|ENSG00000197653|chr12:123877852-123877853|-/A|frameshift_variant;REV__DNAH10|p.N3499Ifs*2|1|0.14|ENSG00000197653|chr12:123916578-123916578|A/-|frameshift_variant;REV__DNAH10|p.Q2965Kfs*11|1|0.57|ENSG00000197653|chr12:123894687-123894687|C/-|frameshift_variant;REV__ENSG00000197653|ENST00000673944|DNAH10;REV__nc|ENSG00000197653|Q8IVF4|DNAH10	65.80317337860623	0.1652391959156183	6				NaN	NaN	0	NaN	12408	4018	16427
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16429	41.323	NaN	4462.6	30	0	193.18	0.106				-1	 	0	72	369.2107333314307	736.4069137296614	2	369.21173095703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12409	4018	16427
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16430	41.325	NaN	3791.6	30	0	402.26	0.106	+			13296	GKALRQRA	8	64	450.28045540160946	898.5463578700189	2	450.2814025878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GKALRQRA_	ZNF470|p.F602L|1|0.15|ENSG00000197016|chr19:56578235-56578235|C/A|missense_variant	50.0245360154114	0.5941082100236891	6				NaN	NaN	0	NaN	12410	4018	16427
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16431	41.326	NaN	2356	30	0	88.806	0.106	+			50611	YDVVTPKI	8	64	467.7650721327316	933.5155913322632	2	467.76568603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YDVVTPKI_	ENSG00000181004|ENST00000314218|BBS12	56.72105179125745	0.5342425954139568	6				NaN	NaN	0	NaN	12411	4018	16427
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16432	41.328	NaN	2490.8	30	0	164.09	0.106	+			19266	KAETGEKLL	9	59	494.7865824878189	987.5586120424379	2	494.7871398925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KAETGEKLL_	APAF1|p.E1208Gfs*14|1|0.23|ENSG00000120868|chr12:98732437-98732438|-/G|frameshift_variant;APAF1|p.F787Sfs*2|1|0.33|ENSG00000120868|chr12:98699461-98699461|C/-|frameshift_variant;ENSG00000120868|ENST00000551964|APAF1;nc|ENSG00000120868|O14727-2|APAF1;nc|ENSG00000120868|O14727-3|APAF1;nc|ENSG00000120868|O14727-4|APAF1;nc|ENSG00000120868|O14727-5|APAF1	36.446750945000026	0.4619375763483977	6				NaN	NaN	0	NaN	12412	4018	16427
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16433	41.33	NaN	7512.6	30	0	1195.9	0.037			+	24378	LFSIVCFQY	9	74	588.7923056508544	1175.5700583685086	2	588.7959594726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_LFSIVC(Carbamidomethyl (C))FQY_	REV__ENST00000492964.1_1_2:175664846-175666604:-|nuORF	53.351449002276354	0.2690372970092375	6				NaN	NaN	0	NaN	12413	4018	16427
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16434	41.331	NaN	1806.7	30	0	177.47	0.144	+			10679	EYSKYLQQAF	10	64	638.81228323221	1275.61001353122	2	638.8138427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EYSKYLQQAF_	ENSG00000162702|ENST00000367353|ZNF281;nc|ENSG00000162702|Q9Y2X9-2|ZNF281	31.529811441608018	0.6223461015008678	6				NaN	NaN	0	NaN	12414	4018	16427
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16449	41.364	NaN	9356.5	30	0	1578.6	0.214			+	21426	KMWLGYIY	8	77	537.2777251144059	1072.5408972956118	2	537.2794799804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KMWLGYIY_	REV__ENSG00000064313|ENST00000378164|TAF2;REV__TAF2|p.A1003Lfs*3|1|0.21|ENSG00000064313|chr8:119746807-119746807|T/-|frameshift_variant;REV__TAF2|p.I604Sfs*3|1|0.11|ENSG00000064313|chr8:119785250-119785250|T/-|frameshift_variant	65.89745868150666	0.44339748671293633	6				NaN	NaN	0	NaN	12426	4021	16448
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16450	41.368	NaN	18375	30	0	2843.9	0.106			+	10315	ETRKEGSLAI	10	81	552.3069272100719	1102.5993014869437	2	552.3089599609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ETRKEGSLAI_	REV__tr|U7SPB8|U7SPB8_FUSNUTrimericautotransporteradhesinYadA-likeC-terminalmembraneanchordomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01806PE=3SV=1	58.22992032128504	0.38193887838457763	6				NaN	NaN	0	NaN	12427	4021	16448
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16451	41.37	NaN	5461.9	30	0	443.42	0.106				-1	 	0	74	347.19776234012545	692.3809717470509	2	347.19866943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12428	4021	16448
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16452	41.371	NaN	6445.1	30	0	1132	0.106			+	-1	LNLSECQSK	9	66	539.7655809801437	NaN	0	539.7658081054688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_LNLSEC(Carbamidomethyl (C))QSK_	REV__ENSG00000183873|ENST00000423572|SCN5A;REV__nc|ENSG00000183873|Q14524-3|SCN5A;REV__nc|ENSG00000183873|Q14524-4|SCN5A;REV__nc|ENSG00000183873|Q14524-5|SCN5A;REV__nc|ENSG00000183873|Q14524-6|SCN5A;REV__nc|ENSG00000183873|Q14524|SCN5A	45.97224482568171	0.23445038899310136	6				NaN	NaN	0	NaN	12429	4021	16448
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16453	41.373	NaN	5680.6	30	0	575	0.106			+	28508	NHQGTEIVDD	10	72	564.2518254438658	1126.4890979545314	2	564.25341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NHQGTEIVDD_	REV__DYNC2H1|p.F2761Lfs*20|1|0.09|ENSG00000187240|chr11:103203742-103203742|T/-|frameshift_variant;REV__DYNC2H1|p.L4021Wfs*5|1|0.3|ENSG00000187240|chr11:103358262-103358262|T/-|frameshift_variant;REV__DYNC2H1|p.P3966Hfs*44|1|0.22|ENSG00000187240|chr11:103321194-103321194|T/-|frameshift_variant;REV__ENSG00000187240|ENST00000375735|DYNC2H1;REV__nc|ENSG00000187240|Q8NCM8-2|DYNC2H1	64.20726635412375	0.3275756395432415	6				NaN	NaN	0	NaN	12430	4021	16448
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16454	41.375	NaN	3428.3	30	0	319	0.035	+			13889	GRDQVASVF	9	59	489.7543759889472	977.4941990446944	2	489.7554626464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GRDQVASVF_	ENSG00000181693|ENST00000641600|OR8H1;ENSG00000181767|ENST00000313503|OR8H2	49.44154591367651	0.3095138337212152	6				NaN	NaN	0	NaN	12431	4021	16448
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16455	41.376	NaN	5671.3	30	0	560.01	0.14	+			42657	TAVPTLLKY	9	70	503.3006966276338	1004.5868403220676	2	503.30242919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TAVPTLLKY_	ENSG00000129235|ENST00000250101|TXNDC17;ENST00000571029.1_1_17:6544987-6546336:+|nuORF	54.776311868738084	0.25715957988447635	6				NaN	NaN	0	NaN	12432	4021	16448
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16468	41.405	NaN	8864.3	30	0	1247.7	0.214			+	-1	YILEVMIY	8	78	530.2758137007879	1058.5370744683757	2	530.2777099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_YILEVM(Oxidation (M))IY_	REV__L1PA8_dup4178|chr8:94121319-94127043:-|4.057818296907117|0.2856926403965029|3.83|481.0|181|1|anti-sense	54.76467175910256	0.5536104764165384	6				NaN	NaN	0	NaN	12442	4024	16467
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16469	41.409	NaN	11238	30	0	1035.7	0.106	+			27407	MKSLKVMR	8	73	504.78812522760984	1007.5616975220197	2	504.7895812988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_MKSLKVM(Oxidation (M))R_	ENST00000492807.6_1_6:146480699-146625814:+|nuORF	58.22992032128504	0.519305013932957	6				NaN	NaN	0	NaN	12443	4024	16467
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16470	41.411	NaN	6327.3	30	0	595.18	0.106			+	27018	LYSERLLQS	9	75	554.8035345799171	1107.5925162266342	2	554.8057250976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LYSERLLQS_	REV__ENSG00000138347|ENST00000358913|MYPN;REV__MYPN|p.I891*|1|0.12|ENSG00000138347|chr10:68175423-68175423|A/-|frameshift_variant;REV__MYPN|p.K575Nfs*9|1|0.23|ENSG00000138347|chr10:68166410-68166410|C/-|frameshift_variant	54.776311868738084	0.25715957988447635	6				NaN	NaN	0	NaN	12444	4024	16467
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16471	41.413	NaN	7194.4	30	0	1020.8	0.106	+			949	AEIVASSVIL	10	72	501.29972815677905	1000.5849033803581	2	501.3026123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AEIVASSVIL_	ENST00000562017.1_1_16:56643060-56643138:+|nuORF	71.87747018426188	0.26198133118427214	6				NaN	NaN	0	NaN	12445	4024	16467
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16472	41.414	NaN	3994.8	30	0	389.05	0.106			+	14264	GSTIGTKKR	9	66	474.2856481843481	946.5567434354962	2	474.28717041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GSTIGTKKR_	REV__ENST00000459941.1_1_3:9516535-9516574:+|nuORF	51.19269402634007	0.2889735674168909	6				NaN	NaN	0	NaN	12446	4024	16467
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16473	41.416	NaN	3024.3	30	0	169.9	0.106	+			36224	SELVLTRL	8	62	465.78251604436997	929.55047915554	2	465.78448486328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SELVLTRL_	ENSG00000118162|ENST00000338134|KPTN;nc|ENSG00000118162|Q9Y664-2|KPTN	67.49366992349736	0.4277823096851425	6				NaN	NaN	0	NaN	12447	4024	16467
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16474	41.418	NaN	3154.3	30	0	433.32	0.034	+			2187	ALNAGSYASL	10	62	483.7464334835612	965.4783140339224	2	483.7478942871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ALNAGSYASL_	CLASP2|p.L1169Ffs*6|1|0.14|ENSG00000163539|chr3:33510729-33510730|-/A|frameshift_variant;CLASP2|p.M744Nfs*4|1|0.19|ENSG00000163539|chr3:33560868-33560869|-/T|frameshift_variant;CLASP2|p.M744Wfs*33|2|0.29|ENSG00000163539|chr3:33560869-33560869|T/-|frameshift_variant;ENSG00000163539|ENST00000682230|CLASP2;nc|ENSG00000163539|O75122-2|CLASP2;nc|ENSG00000163539|O75122-3|CLASP2;nc|ENSG00000163539|O75122|CLASP2	112.10723106719422	0.0417416748461292	6				NaN	NaN	0	NaN	12448	4024	16467
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16485	41.443	NaN	10923	30	0	903.84	0.215	+			13567	GLTCDKICSM	10	74	535.7382679047807	1069.4619828763614	2	535.7401123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GLTCDKICSM_	ENST00000442655.2_1_4:9032265-9032511:+|nuORF	44.377184641726394	0.5088115166961078	6				NaN	NaN	0	NaN	12456	4027	16484
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16486	41.447	NaN	13751	30	0	982.51	0.106	+			34108	RSQVCMKLS	9	72	526.2730062779165	1050.5314596226328	2	526.2750244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RSQVCMKLS_	ENSG00000181626|ENST00000587848|ANKRD62;ENST00000418274.2_1_18:12102771-12127935:+|nuORF;nc|ENSG00000181626|A6NC57-2|ANKRD62	96.19043198914106	0.047412499214244314	6				NaN	NaN	0	NaN	12457	4027	16484
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16487	41.449	NaN	10136	30	0	5809.3	0.106			+	12498	GEEISTLKLHA	11	71	599.3276962546665	1196.640839576133	2	599.3292236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GEEISTLKLHA_	REV__ENSG00000164675|ENST00000324698|IQUB	35.15202426646627	0.6210751305041943	6				NaN	NaN	0	NaN	12458	4027	16484
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16488	41.45	NaN	8475.7	30	0	2305.7	0.106	+			8768	EEIAFLKKL	9	74	545.829253389794	NaN	0	545.8292236328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EEIAFLKKL_	ENSG00000026025|ENST00000544301|VIM;ENST00000421459.2_2_10:17272631-17276850:+|nuORF	129.68262048586715	0.000636733675118682	6				NaN	NaN	0	NaN	12459	4027	16484
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16489	41.452	NaN	3761.4	30	0	400.04	0.106			+	-1	MDMLQQLQQ	9	65	575.7639788388409	1149.5134047444817	2	575.7657470703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_M(Oxidation (M))DMLQQLQQ_	REV__ENSG00000086758|ENST00000262854|HUWE1;REV__ENST00000218328.12_1_X:53611240-53681066:-|nuORF;REV__HUWE1|p.R1657Mfs*13|1|0.21|ENSG00000086758|chrX:53585043-53585044|-/A|frameshift_variant;REV__nc|ENSG00000086758|Q7Z6Z7-2|HUWE1;REV__nc|ENSG00000086758|Q7Z6Z7-3|HUWE1	39.252832667884924	0.4290233611298554	6				NaN	NaN	0	NaN	12460	4027	16484
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16490	41.454	NaN	5441.4	30	0	2122.9	0.106			+	7374	DDPDVERLSI	10	73	579.788078952481	1157.5616049717619	2	579.7889404296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DDPDVERLSI_	REV__ENSG00000155495|ENST00000285879|MAGEC1;REV__MAGEC1|p.G962D|1|0.15|ENSG00000155495|chrX:141908289-141908289|G/A|missense_variant;REV__nc|ENSG00000155495|O60732-2|MAGEC1	80.45461616416974	0.1919067876629769	6				NaN	NaN	0	NaN	12461	4027	16484
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16491	41.456	NaN	2240	30	0	297.39	0.035			+	-1	MLKRMGLM	8	66	498.26369130857773	994.5128296839555	2	498.2649230957031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_M(Oxidation (M))LKRMGLM_	REV__ENSG00000013288|ENST00000285599|MAN2B2;REV__nc|ENSG00000013288|Q9Y2E5-2|MAN2B2	46.76643321282427	0.6143254112625767	6				NaN	NaN	0	NaN	12462	4027	16484
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16504	41.483	NaN	5857.8	30	0	660.71	0.214			+	-1	MAEKKPRM	8	65	503.76232965782106	1005.5101063824421	2	503.7635498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_MAEKKPRM(Oxidation (M))_	REV__ENSG00000078043|ENST00000585916|PIAS2;REV__ENST00000590127.5_1_18:44407908-44497416:-|nuORF;REV__nc|ENSG00000078043|O75928-2|PIAS2	45.9519527083369	0.6193794311207887	6				NaN	NaN	0	NaN	12472	4030	16503
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16505	41.487	NaN	10898	30	0	2143	0.106				-1	 	0	71	425.73593503056725	849.4573171279345	2	425.7368469238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12473	4030	16503
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16506	41.489	NaN	4790	30	0	1158.4	0.106	+			35213	SAKSNKFII	9	43	336.5344378546052	NaN	0	336.5343017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SAKSNKFII_	ENSG00000076826|ENST00000160298|CAMSAP3;ENST00000595692.1_1_19:7679981-7682940:+|nuORF;nc|ENSG00000076826|Q9P1Y5-2|CAMSAP3	25.450171626174864	0.34907449758287085	6				NaN	NaN	0	NaN	12474	4030	16503
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16507	41.491	NaN	6948.6	30	0	883.25	0.106			+	34141	RSVKNRAL	8	75	472.29344341675466	942.5723339003093	2	472.2943420410156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RSVKNRAL_	REV__ENSG00000139330|ENST00000266719|KERA	63.30626980617807	0.4690498839812213	6				NaN	NaN	0	NaN	12475	4030	16503
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16508	41.492	NaN	6302.5	30	0	1506.9	0.106				-1	 	0	67	512.2832335457548	1022.5519141583096	2	512.2845458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12476	4030	16503
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16509	41.494	NaN	3185.7	30	0	359.46	0.034	+			12676	GEIVTIAHL	9	60	476.77582063423296	951.5370883352659	2	476.7767028808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GEIVTIAHL_	ENSG00000184432|ENST00000333188|COPB2;nc|ENSG00000184432|P35606-2|COPB2	87.75429964447693	0.0711966946989736	6				NaN	NaN	0	NaN	12477	4030	16503
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16510	41.495	NaN	2906.6	30	0	265.88	0.138			+	47845	VSLDLAQI	8	56	429.75008761181203	NaN	0	429.7500305175781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VSLDLAQI_	REV__ENSG00000105701|ENST00000608443|FKBP8;REV__FKBP8|p.Q182Kfs*17|1|0.36|ENSG00000105701|chr19:18539378-18539378|G/-|frameshift_variant;REV__nc|ENSG00000105701|Q14318|FKBP8	56.72105179125745	1.7418937515398478	6				NaN	NaN	0	NaN	12478	4030	16503
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16523	41.524	NaN	7924.8	30	0	3335.3	0.214	+			32683	RAFLPESGF	9	65	512.266452017031	1022.5183511008621	2	512.267822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RAFLPESGF_	ENSG00000133247|ENST00000255613|KMT5C;ENST00000589338.5_1_19:55853250-55854220:+|nuORF	44.116797842482775	0.37197099687881774	6				NaN	NaN	0	NaN	12488	4033	16522
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16524	41.527	NaN	6125	30	0	490.54	0.106			+	-1	LFLEILIMP	9	79	552.8224394382942	1103.6303259433882	2	552.824462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LFLEILIM(Oxidation (M))P_	REV__ENSG00000124615|ENST00000340692|MOCS1;REV__nc|ENSG00000124615|Q9NZB8-8|MOCS1	33.51558372728122	0.4900267029546261	6				NaN	NaN	0	NaN	12489	4033	16522
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16525	41.529	NaN	2443	30	0	269.3	0.106				-1	 	0	54	451.7800907796461	901.5456286260923	2	451.78179931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12490	4033	16522
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16526	41.531	NaN	1664.8	30	0	282.18	0.106	+			22497	KTNTLPSLPG	10	51	343.19766570240824	NaN	0	343.19757080078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTNTLPSLPG_	ENST00000531006.1_1_8:144698125-144698617:-|nuORF	27.047317107675042	0.41136583337917604	6				NaN	NaN	0	NaN	12491	4033	16522
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16527	41.533	NaN	7590.2	30	0	527.08	0.106			+	27455	MLLMTSKLQ	9	78	548.7913040664918	1095.5680551997834	2	548.7932739257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Oxidation (M)	_M(Oxidation (M))LLM(Oxidation (M))TSKLQ_	REV__ENSG00000138399|ENST00000453153|FASTKD1;REV__ENST00000506586.1_1_5:93928514-93929327:+|nuORF;REV__nc|ENSG00000138399|Q53R41-2|FASTKD1	79.45101966838831	0.09992237243120712	6				NaN	NaN	0	NaN	12492	4033	16522
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16528	41.535	NaN	2112.9	30	0	384.55	0.106			+	51140	YNSLARLF	8	59	492.26928124802214	NaN	0	492.2688293457031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YNSLARLF_	REV__ENSG00000140057|ENST00000267584|AK7	47.657333605630114	1.7418937515398478	6				NaN	NaN	0	NaN	12493	4033	16522
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16529	41.536	NaN	1747.3	30	0	262.33	0.033				-1	 	0	52	433.75145720959785	865.4883614859957	2	433.7525634765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12494	4033	16522
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16540	41.561	NaN	15637	30	0	2881.8	0.214			+	2081	ALDRRRTK	8	72	508.30952605033696	1014.6044991674739	2	508.31109619140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ALDRRRTK_	REV__ENSG00000111641|ENST00000322166|NOP2;REV__ENST00000536506.5_1_12:6669839-6672276:-|nuORF;REV__nc|ENSG00000111641|P46087-2|NOP2;REV__nc|ENSG00000111641|P46087-3|NOP2;REV__nc|ENSG00000111641|P46087-4|NOP2	67.49366992349736	0.4277823096851425	6				NaN	NaN	0	NaN	12502	4036	16539
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16541	41.565	NaN	11805	30	0	961.14	0.106			+	27836	MSTTAASLFY	10	82	546.2588304544462	1090.5031079756923	2	546.2595825195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MSTTAASLFY_	REV__ENST00000495910.6_1_17:29490228-29576996:+|nuORF	60.97194046774394	0.3570005369683776	6				NaN	NaN	0	NaN	12503	4036	16539
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16542	41.567	NaN	6779.8	30	0	451.94	0.106	+			6579	AYLEAYKEF	9	79	567.2786614072845	1132.542769881369	2	567.2794799804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AYLEAYKEF_	ENSG00000139163|ENST00000266517|ETNK1;nc|ENSG00000139163|Q9HBU6|ETNK1	98.58198989935565	0.04066992115528678	6				NaN	NaN	0	NaN	12504	4036	16539
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16543	41.569	NaN	5104.6	30	0	266.54	0.106	+			42115	SYLENVDHF	9	73	562.2549985166321	1122.495444100064	2	562.2568969726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SYLENVDHF_	ENSG00000108509|ENST00000348066|CAMTA2;ENST00000574951.5_1_17:4872053-4885503:-|nuORF;ENST00000576872.1_1_17:4872867-4875829:-|nuORF;nc|ENSG00000108509|O94983-2|CAMTA2;nc|ENSG00000108509|O94983-3|CAMTA2;nc|ENSG00000108509|O94983-4|CAMTA2;nc|ENSG00000108509|O94983-5|CAMTA2;nc|ENSG00000108509|O94983-6|CAMTA2	58.22992032128504	0.22837015374068087	6				NaN	NaN	0	NaN	12505	4036	16539
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16544	41.571	NaN	3804.1	30	0	490.79	0.106	+			43888	TNCSSEEEITL	11	69	613.2653810774822	1224.5162092217643	2	613.7686767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TNCSSEEEITL_	ENSG00000075568|ENST00000186436|TMEM131;TMEM131|p.L1469Tfs*5|1|0.43|ENSG00000075568|chr2:97772340-97772341|-/T|frameshift_variant	35.15202426646627	0.6210751305041943	6				NaN	NaN	0	NaN	12506	4036	16539
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16545	41.572	NaN	4956.3	30	0	481.68	0.106	+			11420	FLSGEGDLSR	10	75	540.7730775186358	NaN	0	540.7738647460938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FLSGEGDLSR_	ASPM|p.I1717Nfs*24|1|0.43|ENSG00000066279|chr1:197104101-197104102|-/T|frameshift_variant;ASPM|p.I3229Nfs*2|1|0.48|ENSG00000066279|chr1:197090339-197090340|-/T|frameshift_variant;ASPM|p.L1872Ffs*24|1|0.43|ENSG00000066279|chr1:197103635-197103636|-/A|frameshift_variant;ASPM|p.M2261*|1|0.44|ENSG00000066279|chr1:197102470-197102470|T/-|frameshift_variant;ASPM|p.N1062Rfs*28|1|0.1|ENSG00000066279|chr1:197124311-197124315|TAAGT/-|frameshift_variant;ASPM|p.N1680Kfs*11|1|0.33|ENSG00000066279|chr1:197104211-197104212|-/T|frameshift_variant;ASPM|p.Q2620Nfs*22|1|0.15|ENSG00000066279|chr1:197101393-197101394|-/TT|frameshift_variant;ASPM|p.Q2620Tfs*17|1|0.19|ENSG00000066279|chr1:197101393-197101394|-/T|frameshift_variant;ENSG00000066279|ENST00000367409|ASPM;nc|ENSG00000066279|Q8IZT6-2|ASPM	49.536043120802724	0.30853568297719935	6				NaN	NaN	0	NaN	12507	4036	16539
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16546	41.574	NaN	1539.6	30	0	129.91	0.031	+			24535	LGLGVSPG	8	41	350.20708227901747	NaN	0	350.20733642578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LGLGVSPG_	ENSG00000213199|ENST00000349064|ASIC3;ENST00000474135.1_1_7:150747249-150747845:+|nuORF;ENST00000590669.5_1_19:10362732-10362900:+|nuORF;nc|ENSG00000213199|Q9UHC3-2|ASIC3;nc|ENSG00000213199|Q9UHC3-3|ASIC3;nc|ENSG00000213199|Q9UHC3-4|ASIC3	29.841539824830324	1.7418937515398478	6				NaN	NaN	0	NaN	12508	4036	16539
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16558	41.6	NaN	8698.7	30	0	508.47	0.214			+	11338	FLEEAVRPI	9	78	537.3034007541428	1072.5922485750855	2	537.3056030273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FLEEAVRPI_	REV__ENSG00000125337|ENST00000643607|KIF25;REV__nc|ENSG00000125337|Q9UIL4-2|KIF25	71.29570347882199	0.13518600952103718	6				NaN	NaN	0	NaN	12517	4039	16557
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16559	41.603	NaN	6694.7	30	0	656.07	0.106			+	30113	PRPGSAGLDAL	11	77	527.2883980438644	1052.5622431545287	2	527.29052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PRPGSAGLDAL_	REV__ENST00000307422.9_2_19:10370504-10370603:+|nuORF	49.536043120802724	0.4274608637932522	6				NaN	NaN	0	NaN	12518	4039	16557
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16560	41.605	NaN	3286.7	30	0	273.59	0.106			+	10347	ETTTYRALI	9	77	534.2908935546875	NaN	0	534.2908935546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ETTTYRALI_	REV__ENSG00000103544|ENST00000417362|VPS35L	45.97224482568171	0.23445038899310136	6				NaN	NaN	0	NaN	12519	4039	16557
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16561	41.607	NaN	3158.1	30	0	372.05	0.106			+	32401	QVEAVLTELRP	11	68	627.8563121978867	NaN	0	627.8571166992188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QVEAVLTELRP_	REV__ENSG00000117139|ENST00000367265|KDM5B;REV__nc|ENSG00000117139|Q9UGL1-2|KDM5B	43.650786325866115	0.3609211547700893	6				NaN	NaN	0	NaN	12520	4039	16557
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16562	41.609	NaN	3323	30	0	261.99	0.106	+			33980	RSFKITSSNK	10	68	584.3281162832295	1166.641679633259	2	584.8311157226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RSFKITSSNK_	ENST00000515662.6_1_3:9408622-9412756:+|nuORF	42.86426827375447	0.522752283233888	6				NaN	NaN	0	NaN	12521	4039	16557
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16563	41.611	NaN	1137.5	30	0	47.23	0.106	+			36206	SELLVVKM	8	52	459.7690818027493	917.5236106722987	2	459.7701416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SELLVVKM_	ENSG00000124006|ENST00000404537|OBSL1;ENST00000465149.1_1_2:220420747-220435459:-|nuORF;nc|ENSG00000124006|O75147-1|OBSL1;nc|ENSG00000124006|O75147-2|OBSL1;nc|ENSG00000124006|O75147-4|OBSL1;OBSL1-MRPL2|1|fusion	42.396135135203025	0.6414440140393314	6				NaN	NaN	0	NaN	12522	4039	16557
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16564	41.613	NaN	4067.2	30	0	402.35	0.035				-1	 	0	66	489.28544002638984	976.5563271195797	2	489.28778076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12523	4039	16557
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16577	41.64	NaN	7642.6	30	0	1114.1	0.214				-1	 	0	61	462.31656123747376	922.6185695417475	2	462.3176574707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12533	4042	16576
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16578	41.644	NaN	6558.9	30	0	556.25	0.106	+			50570	YAYEPADTAL	10	75	557.2567169308379	1112.4988809284757	2	557.2587280273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YAYEPADTAL_	ENSG00000106541|ENST00000419304|AGR2	82.24051045832904	0.17731618517892733	6				NaN	NaN	0	NaN	12534	4042	16576
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16579	41.646	NaN	3756.7	30	0	414.62	0.106				-1	 	0	58	443.7700734707427	885.5255940082855	2	443.771240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12535	4042	16576
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16580	41.648	NaN	5073.2	30	0	464.66	0.106			+	47627	VSAPHLDVIN	10	75	532.7891825597272	1063.5638121862544	2	532.7910766601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VSAPHLDVIN_	REV__DSCAML1|p.M1051Wfs*8|3|0.26|ENSG00000177103|chr11:117469970-117469970|C/-|frameshift_variant;REV__DSCAML1|p.P1274Lfs*7|2|0.3|ENSG00000177103|chr11:117450616-117450616|G/-|frameshift_variant;REV__DSCAML1|p.P2046Qfs*45|1|0.5|ENSG00000177103|chr11:117428533-117428533|G/-|frameshift_variant;REV__DSCAML1|p.S2067Afs*24|1|0.48|ENSG00000177103|chr11:117428472-117428472|G/-|frameshift_variant;REV__ENSG00000177103|ENST00000651296|DSCAML1;REV__nc|ENSG00000177103|Q8TD84-2|DSCAML1	66.42927471994793	0.3073667423445326	6				NaN	NaN	0	NaN	12536	4042	16576
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16581	41.65	NaN	3773.2	30	0	343.38	0.106	+			43308	TFVGESRVL	9	70	504.2784135491107	1006.5422741650215	2	504.27972412109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TFVGESRVL_	DYTN|p.A171V|1|0.4|ENSG00000232125|chr2:206700188-206700188|G/A|missense_variant	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	12537	4042	16576
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16582	41.651	NaN	4395.7	30	0	512.26	0.035			+	6930	CNLLIKRAA	9	68	501.29972815677905	1000.5849033803581	2	501.29693603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_CNLLIKRAA_	REV__ENSG00000236699|ENST00000420470|ARHGEF38	71.29570347882199	0.13518600952103718	6				NaN	NaN	0	NaN	12538	4042	16576
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16583	41.652	NaN	3805.2	30	0	1107.4	0.139				-1	 	0	55	486.29600304288476	970.5774531525695	2	486.2975769042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12539	4042	16576
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16595	41.682	NaN	9293.1	30	0	2217.7	0.214			+	10045	ESDDLPLFQL	10	70	588.7923056508544	1175.5700583685086	2	588.7945556640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ESDDLPLFQL_	REV__ENSG00000051825|ENST00000606320|MPHOSPH9;REV__MPHOSPH9|p.T1047Nfs*4|1|0.3|ENSG00000051825|chr12:123161377-123161378|-/T|frameshift_variant;REV__nc|ENSG00000051825|Q99550-2|MPHOSPH9	42.86426827375447	0.522752283233888	6				NaN	NaN	0	NaN	12548	4045	16594
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16596	41.686	NaN	11134	30	0	1236.1	0.106	+			9301	EHVNTVGYGK	10	76	552.2780467841818	1102.5415406351635	2	552.27978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EHVNTVGYGK_	ENSG00000175073|ENST00000310421|VCPIP1;VCPIP1|p.A460Qfs*2|1|0.36|ENSG00000175073|chr8:66665582-66665582|T/-|frameshift_variant;VCPIP1|p.K1108Nfs*37|1|0.15|ENSG00000175073|chr8:66634846-66634846|T/-|frameshift_variant	64.20726635412375	0.3275756395432415	6				NaN	NaN	0	NaN	12549	4045	16594
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16597	41.688	NaN	4462.2	30	0	403.18	0.106	+			32325	QTSVTLLW	8	59	474.26193083506473	946.5093087369295	2	474.76123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QTSVTLLW_	chr12:15595640-15596090|345|13.48|0.69|4.28|+|ENST00000674286|PTPRO,PTPRO;ENSG00000151490|ENST00000281171|PTPRO;nc|ENSG00000151490|Q16827-2|PTPRO	44.116797842482775	0.6307669463330267	6				NaN	NaN	0	NaN	12550	4045	16594
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16598	41.69	NaN	4725.3	30	0	351.66	0.106	+			6595	AYLVYTDRL	9	75	557.2986114689234	1112.5826700046466	2	557.3009643554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AYLVYTDRL_	ENSG00000141934|ENST00000434325|PLPP2;nc|ENSG00000141934|O43688-2|PLPP2;nc|ENSG00000141934|O43688-3|PLPP2	60.97194046774394	0.20551255781574032	6				NaN	NaN	0	NaN	12551	4045	16594
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16599	41.692	NaN	4559.8	30	0	528.05	0.106			+	10946	FDTSKVGQIK	10	83	561.8091563674894	1121.6037598017788	2	561.8106689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FDTSKVGQIK_	REV__ENSG00000221843|ENST00000447166|C2orf16	42.86426827375447	0.522752283233888	6				NaN	NaN	0	NaN	12552	4045	16594
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16600	41.693	NaN	1874.3	30	0	220.09	0.106	+			23483	LAFGGKMVM	9	58	477.24917870178695	952.4838044703739	2	477.2503356933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LAFGGKMVM_	ENST00000361763.8_1_11:118175656-118183365:+|nuORF	50.0245360154114	0.3026755932229825	6				NaN	NaN	0	NaN	12553	4045	16594
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16601	41.695	NaN	4744.3	30	0	607.61	0.034			+	43469	TGPAEPASSL	10	59	465.233390355127	NaN	0	465.233642578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TGPAEPASSL_	REV__ENSG00000103549|ENST00000324685|RNF40;REV__ENST00000493683.5_1_16:30773821-30780773:+|nuORF;REV__nc|ENSG00000103549|O75150-3|RNF40;REV__nc|ENSG00000103549|O75150-4|RNF40	52.936696900407355	0.28703625529470256	6				NaN	NaN	0	NaN	12554	4045	16594
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16613	41.721	NaN	3798.5	30	0	320.19	0.214				-1	 	0	64	347.19776234012545	692.3809717470509	2	347.1987609863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12563	4048	16612
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16614	41.725	NaN	4630	30	0	549.17	0.106			+	27883	MTLIVIMF	8	65	484.2704432658643	966.5263335985286	2	484.2713623046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MTLIVIMF_	REV__nc|ENSG00000166473|Q7Z442-2|PKD1L2;REV__nc|ENSG00000166473|Q7Z442|PKD1L2	47.91560031466742	0.6071945918984287	6				NaN	NaN	0	NaN	12564	4048	16612
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16615	41.727	NaN	4566.9	30	0	1219.4	0.106	+			7115	DAAGDRLFATY	11	72	600.2882534851121	1198.5619540370242	2	600.2898559570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DAAGDRLFATY_	ENSG00000132518|ENST00000254854|GUCY2D	38.753607047826485	0.5749975102143227	6				NaN	NaN	0	NaN	12565	4048	16612
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16616	41.728	NaN	4203.2	30	0	387.86	0.106			+	50377	WWSKAFSF	8	80	529.7593905451403	1057.5042281570804	2	529.761474609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_WWSKAFSF_	REV__ENSG00000171724|ENST00000302536|VAT1L	58.78195531508484	0.5138399468736706	6				NaN	NaN	0	NaN	12566	4048	16612
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16617	41.73	NaN	4199.2	30	0	301.74	0.106	+			26179	LSRISLTQAG	10	67	523.3039742166703	1044.5933955001406	2	523.8070678710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSRISLTQAG_	ENSG00000095261|ENST00000210313|PSMD5;PSMD5|p.G278Wfs*8|2|0.31|ENSG00000095261|chr9:120824668-120824669|-/A|frameshift_variant	80.45461616416974	0.1919067876629769	6				NaN	NaN	0	NaN	12567	4048	16612
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16618	41.732	NaN	2294.6	30	0	379.13	0.034			+	7369	DDLTISKGL	9	65	481.26290124198806	960.5112495507761	2	481.2632751464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DDLTISKGL_	REV__ENSG00000108854|ENST00000262435|SMURF2;REV__ENST00000582081.5_1_17:62541968-62590137:-|nuORF	41.42661286455405	0.403525789677298	6				NaN	NaN	0	NaN	12568	4048	16612
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16619	41.733	NaN	3321.2	30	0	883.03	0.139	+			7001	CRKQLGLVA	9	67	494.2930002676646	986.5714476021292	2	494.29486083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_CRKQLGLVA_	ENSG00000127954|ENST00000380079|STEAP4	40.5726180659479	0.4135428067754104	6				NaN	NaN	0	NaN	12569	4048	16612
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16624	41.749	NaN	4209.3	30	0	213.85	0.214				-1	 	0	68	369.2107333314307	736.4069137296614	2	369.211669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12571	4051	16623
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16625	41.753	NaN	4219.9	30	0	481.01	0.106	+			34393	RTSEKPSKL	9	63	523.3039742166703	1044.5933955001406	2	523.3060913085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RTSEKPSKL_	SECISBP2L|p.S902R|1|0.11|ENSG00000138593|chr15:48992844-48992844|G/T|missense_variant	51.19269402634007	0.2889735674168909	6				NaN	NaN	0	NaN	12572	4051	16623
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16626	41.755	NaN	4288.2	30	0	417.86	0.106				-1	VMNNMRKQL	9	74	575.2970401956145	1148.579527458029	2	575.2994995117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_VMNNM(Oxidation (M))RKQL_	ENST00000459661.5_1_7:23145645-23164336:+|nuORF	37.15910966729921	0.4535818937225704	6				NaN	NaN	0	NaN	12573	4051	16623
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16627	41.757	NaN	3198.6	30	0	323.65	0.106	+			51076	YLPAGQSVL	9	56	474.26193083506473	946.5093087369295	2	474.2632141113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YLPAGQSVL_	ENSG00000167085|ENST00000300408|PHB1;nc|ENSG00000167085|P35232-2|PHB1	76.7741389293348	0.11149722112137898	6				NaN	NaN	0	NaN	12574	4051	16623
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16628	41.758	NaN	3303	30	0	239.01	0.106	+			27485	MLVRAVWR	8	63	515.8047855512957	1029.5950181693913	2	515.8052368164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MLVRAVWR_	ENST00000366730.5_1_1:228327714-228327759:+|nuORF	37.028477286268924	0.6747514403204248	6				NaN	NaN	0	NaN	12575	4051	16623
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16629	41.76	NaN	2336	30	0	164.92	0.106	+			44961	TVCDFRLSY	9	65	580.7748919034034	NaN	0	580.7747802734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_TVC(Carbamidomethyl (C))DFRLSY_	ENSG00000105135|ENST00000263383|ILVBL;ENST00000533086.5_1_19:15228578-15234387:-|nuORF	67.49366992349736	0.1173583512313808	6				NaN	NaN	0	NaN	12576	4051	16623
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16630	41.762	NaN	2956.8	30	0	341.31	0.037			+	47234	VMLLSLTSTAV	11	69	567.8296526800768	NaN	0	567.8296508789062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VMLLSLTSTAV_	REV__ENSG00000062524|ENST00000263800|LTK;REV__ENST00000563518.5_1_15:41799676-41805922:-|nuORF;REV__LTK|p.D681Tfs*76|1|0.2|ENSG00000062524|chr15:41504852-41504852|C/-|frameshift_variant;REV__nc|ENSG00000062524|P29376-3|LTK;REV__nc|ENSG00000062524|P29376-4|LTK;REV__nc|ENSG00000062524|P29376-5|LTK	45.97224482568171	0.34424757290527136	6				NaN	NaN	0	NaN	12577	4051	16623
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16638	41.781	NaN	10559	30	0	3936.1	0.214	+			26413	LTESEVQPR	9	77	529.7783294439836	1057.542105954767	2	529.780029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LTESEVQPR_	ENST00000351773.7_1_10:38384465-38384722:+|nuORF	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	12582	4054	16637
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16639	41.784	NaN	2681	30	0	176.83	0.106			+	39294	STASITLSSL	10	61	490.26754139376726	978.5205298543345	2	490.2684326171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_STASITLSSL_	REV__ENST00000409260.5_1_2:220110626-220111251:+|nuORF;REV__ENST00000409516.7_1_2:220110217-220112141:+|nuORF;REV__ENST00000409638.7_1_2:220110217-220111398:+|nuORF;REV__ENST00000475696.5_1_2:220110350-220111398:+|nuORF;REV__ENST00000486813.1_1_2:220110626-220111851:+|nuORF;REV__ENST00000491697.1_1_2:220110217-220110827:+|nuORF;REV__ENST00000496443.5_1_2:220110461-220110827:+|nuORF	47.657333605630114	0.47858658696240314	6				NaN	NaN	0	NaN	12583	4054	16637
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16640	41.786	NaN	3425.9	30	0	204.47	0.106			+	-1	LPVLMCLLL	9	76	515.8047855512957	1029.5950181693913	2	515.8068237304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_LPVLM(Oxidation (M))CLLL_	REV__ENST00000477205.2_1_10:75576469-75577313:-|nuORF	21.70233525837049	0.6004277881119521	6				NaN	NaN	0	NaN	12584	4054	16637
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16641	41.788	NaN	1894.3	30	0	266.35	0.106	+			47314	VNVNGQQIL	9	59	492.77768872819263	983.5408245231853	2	492.779052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VNVNGQQIL_	ALG11|p.C345Lfs*3|1|0.4|ENSG00000253710|chr13:52024761-52024762|-/T|frameshift_variant;ALG11|p.L133*|1|0.3|ENSG00000253710|chr13:52024122-52024122|T/-|frameshift_variant;ENSG00000253710|ENST00000521508|ALG11	35.61828744233558	0.47037581924408073	6				NaN	NaN	0	NaN	12585	4054	16637
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16642	41.79	NaN	2658.8	30	0	287.08	0.106	+			43122	TERFVSEML	9	62	556.2751163033187	1110.5356796734372	2	556.2788696289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TERFVSEML_	ENSG00000119125|ENST00000358399|GDA;ENST00000477618.1_1_9:74817496-74842957:+|nuORF;nc|ENSG00000119125|Q9Y2T3-2|GDA;nc|ENSG00000119125|Q9Y2T3-3|GDA	50.033510581677724	0.3025703251535696	6				NaN	NaN	0	NaN	12586	4054	16637
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16643	41.792	NaN	2193.9	30	0	394.18	0.106				-1	CIRELFRF	8	72	570.8041743741697	1139.5937958151394	2	571.7946166992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_C(Carbamidomethyl (C))IRELFRF_	ENSG00000107862|ENST00000369983|GBF1;GBF1|p.D1798Tfs*11|1|0.46|ENSG00000107862|chr10:102382143-102382143|C/-|frameshift_variant;GBF1|p.S1486Tfs*46|1|0.17|ENSG00000107862|chr10:102377105-102377106|-/C|frameshift_variant;GBF1|p.S825Pfs*25|1|0.34|ENSG00000107862|chr10:102367124-102367124|T/-|frameshift_variant;nc|ENSG00000107862|Q92538-1|GBF1;nc|ENSG00000107862|Q92538-2|GBF1;nc|ENSG00000107862|Q92538-3|GBF1	30.503639358989545	0.7238069182250283	6				NaN	NaN	0	NaN	12587	4054	16637
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16644	41.794	NaN	2628.2	30	0	414.04	0.036	+			6100	AVNLFSCLCM	10	69	558.7504579673842	NaN	0	558.7501220703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_AVNLFSCLCM(Oxidation (M))_	ENST00000475291.5_1_4:75026231-75026288:+|nuORF	54.776311868738084	0.27540594196716844	6				NaN	NaN	0	NaN	12588	4054	16637
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16657	41.822	NaN	6540.6	30	0	769.09	0.214	+			36275	SENVLQVHL	9	76	519.7806932346058	1037.5468335360115	2	519.7824096679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SENVLQVHL_	ENSG00000115947|ENST00000392857|ORC4;ENST00000495601.1_1_2:148716324-148733527:-|nuORF;ENST00000496670.6_1_2:148709144-148730385:-|nuORF;nc|ENSG00000115947|O43929-2|ORC4;nc|ENSG00000115947|O43929-3|ORC4	75.04331003522576	0.118981335847003	6				NaN	NaN	0	NaN	12598	4057	16656
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16658	41.825	NaN	4799.6	30	0	1016.7	0.106	+			35271	SALPNPPALK	10	38	336.5344378546052	NaN	0	336.53436279296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SALPNPPALK_	CUX1|p.E933Sfs*59|1|0.14|ENSG00000257923|chr7:102202089-102202089|C/-|frameshift_variant;CUX1|p.I1081Sfs*39|2|0.46|ENSG00000257923|chr7:102227471-102227471|C/-|frameshift_variant;ENSG00000257923|ENST00000292535|CUX1;nc|ENSG00000257923|P39880-2|CUX1;nc|ENSG00000257923|P39880-3|CUX1;nc|ENSG00000257923|P39880-4|CUX1;nc|ENSG00000257923|P39880-5|CUX1;nc|ENSG00000257923|P39880-6|CUX1	20.94693142431847	0.4201028297492154	6				NaN	NaN	0	NaN	12599	4057	16656
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16659	41.827	NaN	6406.2	30	0	651.76	0.106			+	9375	EKDIKEISK	9	79	545.3106244638751	1088.6066959945501	2	546.3175659179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EKDIKEISK_	REV__tr|U7SIQ0|U7SIQ0_FUSNUPyrrolidone-carboxylatepeptidaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=pcpPE=3SV=1	39.252832667884924	0.4290233611298554	6				NaN	NaN	0	NaN	12600	4057	16656
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16660	41.829	NaN	2945.9	30	0	233.67	0.106			+	27477	MLTKVLVAG	9	67	466.2856750488281	NaN	0	466.2856750488281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MLTKVLVAG_	REV__ENST00000530758.1_1_3:10168359-10168521:+|nuORF	56.72105179125745	0.16330365735109603	6				NaN	NaN	0	NaN	12601	4057	16656
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16661	41.831	NaN	3907	30	0	340.23	0.106	+			22203	KSTKDRYDK	9	72	570.8041743741697	1139.5937958151394	2	570.8057250976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KSTKDRYDK_	ENSG00000196345|ENST00000426540|ZKSCAN7	42.396135135203025	0.392153681582562	6				NaN	NaN	0	NaN	12602	4057	16656
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16662	41.833	NaN	1500.9	30	0	233.58	0.033				-1	 	0	52	425.73593503056725	849.4573171279345	2	425.7373962402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12603	4057	16656
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16671	41.853	NaN	13639	30	0	2255.4	0.214			+	13270	GITEASRLEQ	10	88	552.2865351739414	1102.5585174146827	2	552.2896728515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GITEASRLEQ_	REV__ADGRV1|p.T5738Pfs*48|1|0.19|ENSG00000164199|chr5:90853288-90853288|A/-|frameshift_variant;REV__ENSG00000164199|ENST00000405460|ADGRV1;REV__nc|ENSG00000164199|Q8WXG9-2|ADGRV1	78.26377905018397	0.20980573808910843	6				NaN	NaN	0	NaN	12609	4060	16670
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16672	41.857	NaN	4931.5	30	0	329.56	0.106				-1	CQSLLSPGAL	10	65	523.270996574789	1044.527440216378	2	523.2716064453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_C(Carbamidomethyl (C))QSLLSPGAL_	ENSG00000130589|ENST00000467148|HELZ2;HELZ2|p.G2213Vfs*22|1|0.14|ENSG00000130589|chr20:63561876-63561876|C/-|frameshift_variant;HELZ2|p.P1310Rfs*32|1|0.09|ENSG00000130589|chr20:63564893-63564893|G/-|frameshift_variant;HELZ2|p.R2206Vfs*29|2|0.28|ENSG00000130589|chr20:63561898-63561898|G/-|frameshift_variant;nc|ENSG00000130589|Q9BYK8-2|HELZ2;nc|ENSG00000130589|Q9BYK8|HELZ2	49.536043120802724	0.461275219792494	6				NaN	NaN	0	NaN	12610	4060	16670
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16673	41.859	NaN	3758.8	30	0	395.47	0.106	+			34744	RYAEEVGIF	9	72	542.2752843309441	1082.5360157286882	2	542.2776489257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RYAEEVGIF_	ENSG00000095380|ENST00000210444|NANS;ENST00000480925.1_1_9:100819090-100823312:+|nuORF;ENST00000495319.1_1_9:100819090-100837887:+|nuORF	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	12611	4060	16670
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16674	41.861	NaN	5118.2	30	0	814.55	0.106	+			30974	QEQSYFVRL	9	72	585.2998216613611	1168.585090389522	2	585.3018188476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QEQSYFVRL_	ENSG00000105355|ENST00000221957|PLIN3;nc|ENSG00000105355|O60664-2|PLIN3;nc|ENSG00000105355|O60664-3|PLIN3;nc|ENSG00000105355|O60664-4|PLIN3	51.19269402634007	0.2889735674168909	6				NaN	NaN	0	NaN	12612	4060	16670
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16675	41.862	NaN	3996.8	30	0	366.39	0.106			+	-1	LDAYCELIL	9	69	555.2848923637862	NaN	0	555.2850341796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_LDAYC(Carbamidomethyl (C))ELIL_	REV__ENSG00000179409|ENST00000319004|GEMIN4	30.503639358989545	0.3235605894931338	6				NaN	NaN	0	NaN	12613	4060	16670
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16676	41.864	NaN	2759.7	30	0	368.3	0.106			+	-1	FIEMNNNAF	9	70	558.2477374776951	NaN	0	558.2454833984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_FIEM(Oxidation (M))NNNAF_	REV__ENSG00000081014|ENST00000261842|AP4E1;REV__nc|ENSG00000081014|Q9UPM8-2|AP4E1	40.77816245573522	0.2702456086868081	6				NaN	NaN	0	NaN	12614	4060	16670
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16677	41.866	NaN	2457.5	30	0	203.4	0.034	+			2198	ALPPGSYASL	10	56	488.2610166794028	NaN	0	488.26123046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ALPPGSYASL_	ENSG00000074054|ENST00000696935|CLASP1;nc|ENSG00000074054|Q7Z460-2|CLASP1;nc|ENSG00000074054|Q7Z460-3|CLASP1;nc|ENSG00000074054|Q7Z460-4|CLASP1;nc|ENSG00000074054|Q7Z460-5|CLASP1;nc|ENSG00000074054|Q7Z460|CLASP1	64.20726635412375	0.1999210135493042	6				NaN	NaN	0	NaN	12615	4060	16670
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16684	41.883	NaN	4795.8	30	0	451.18	0.214	+			37796	SLYWLSTQK	9	70	563.2995101587329	1124.5844673842657	2	563.3013916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLYWLSTQK_	ENSG00000115750|ENST00000263663|TAF1B;nc|ENSG00000115750|Q53T94-2|TAF1B;nc|ENSG00000115750|Q53T94-3|TAF1B;TAF1B|p.K508_N509insLFL|1|0.05|ENSG00000115750|chr2:9919778-9919779|-/ATTGTTTCT|inframe_insertion	94.4091291819064	0.0524345700464502	6				NaN	NaN	0	NaN	12619	4063	16683
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16685	41.886	NaN	4652.6	30	0	447.66	0.106	+			50889	YFRSYKLL	8	68	545.3106244638751	1088.6066959945501	2	545.8116455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YFRSYKLL_	ENSG00000197498|ENST00000441448|RPF2	31.954861631926434	0.7126016770032289	6				NaN	NaN	0	NaN	12620	4063	16683
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16686	41.889	NaN	2711.5	30	0	382.66	0.106			+	28619	NKTIKTVE	8	59	466.7753121209548	931.5360713087097	2	466.7762145996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NKTIKTVE_	REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-10|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-13|TTN;REV__nc|ENSG00000155657|Q8WZ42-2|TTN;REV__nc|ENSG00000155657|Q8WZ42-3|TTN;REV__nc|ENSG00000155657|Q8WZ42-4|TTN;REV__nc|ENSG00000155657|Q8WZ42-5|TTN;REV__nc|ENSG00000155657|Q8WZ42-7|TTN;REV__nc|ENSG00000155657|Q8WZ42-8|TTN;REV__nc|ENSG00000155657|Q8WZ42-9|TTN;REV__nc|ENSG00000155657|Q8WZ42|TTN;REV__TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;REV__TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;REV__TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;REV__TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;REV__TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;REV__TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant	56.72105179125745	0.5342425954139568	6				NaN	NaN	0	NaN	12621	4063	16683
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16687	41.89	NaN	2498.1	30	0	205.85	0.106	+			8751	EEFRDSDDVL	10	72	612.7725902705951	1223.53062760799	2	612.774169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EEFRDSDDVL_	ENSG00000111602|ENST00000553532|TIMELESS;nc|ENSG00000111602|Q9UNS1-2|TIMELESS	40.05817265558897	0.5486090488315611	6				NaN	NaN	0	NaN	12622	4063	16683
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16688	41.892	NaN	2363.3	30	0	250.5	0.106			+	32761	RAQPQVKAR	9	66	527.318865692198	NaN	0	527.3191528320312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RAQPQVKAR_	REV__ENSG00000120054|ENST00000370418|CPN1	71.29570347882199	0.10120983364817086	6				NaN	NaN	0	NaN	12623	4063	16683
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16689	41.894	NaN	2813.3	30	0	202.18	0.106			+	23837	LCVTRMRL	8	65	496.2806400598202	990.5467271864404	2	496.2818603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LCVTRMRL_	REV__ENST00000275517.7_2_11:64846434-64846572:-|nuORF	68.78682469695295	0.41700713582915416	6				NaN	NaN	0	NaN	12624	4063	16683
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16690	41.896	NaN	3032	30	0	254.88	0.036			+	9589	ELKLHVKDE	9	65	555.8103558101323	1109.6061586870644	2	555.8121948242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ELKLHVKDE_	REV__CBLN2|p.G205D|1|0.37|ENSG00000141668|chr18:72538237-72538237|C/T|missense_variant;REV__ENSG00000141668|ENST00000269503|CBLN2;REV__ENST00000581425.1_1_18:70205413-70206043:-|nuORF;REV__ENST00000583651.1_1_18:70205413-70210237:-|nuORF	31.529811441608018	0.5085848003137583	6				NaN	NaN	0	NaN	12625	4063	16683
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16702	41.922	NaN	1554.8	30	0	141.65	0.214	+			43534	TGVLSPTAVI	10	55	479.2832982830633	956.5520436329266	2	479.28472900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TGVLSPTAVI_	ENST00000496391.5_2_7:102065935-102066592:+|nuORF	40.77816245573522	0.5419747034533848	6				NaN	NaN	0	NaN	12634	4066	16701
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16703	41.926	NaN	2977.3	30	0	257.9	0.106	+			10134	ESQKLGAQFL	10	68	560.8025187873183	1119.5904846414364	2	560.8043212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ESQKLGAQFL_	ENSG00000205693|ENST00000381273|MANSC4	51.52775601994872	0.4429225830406686	6				NaN	NaN	0	NaN	12635	4066	16701
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16704	41.928	NaN	2834	30	0	271.42	0.106			+	34035	RSLEAVVEIM	10	63	573.8144812736798	1145.6144096141595	2	573.8173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RSLEAVVEIM_	REV__ENSG00000107185|ENST00000378078|RGP1;REV__ENST00000496906.1_1_9:35749376-35750743:+|nuORF;REV__RGP1|p.G11Vfs*13|1|0.19|ENSG00000107185|chr9:35749784-35749784|G/-|frameshift_variant;REV__RGP1|p.G277Vfs*8|1|0.43|ENSG00000107185|chr9:35752019-35752019|G/-|frameshift_variant	29.170058357718403	0.6416167986984785	6				NaN	NaN	0	NaN	12636	4066	16701
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16705	41.93	NaN	2613.1	30	0	275.34	0.035	+			9210	EGRTHTISL	9	61	507.2747277526678	NaN	0	507.2744140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EGRTHTISL_	ENSG00000102763|ENST00000379310|VWA8;nc|ENSG00000102763|A3KMH1-3|VWA8;VWA8|p.D1438Ifs*16|1|0.27|ENSG00000102763|chr13:41685063-41685063|T/-|frameshift_variant;VWA8|p.G1575Efs*53|1|0.25|ENSG00000102763|chr13:41611729-41611729|C/-|frameshift_variant;VWA8|p.T1319Kfs*27|1|0.09|ENSG00000102763|chr13:41690186-41690186|G/-|frameshift_variant	44.377184641726394	0.24544280798894275	6				NaN	NaN	0	NaN	12637	4066	16701
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16712	41.947	NaN	2398.5	30	0	281.28	0.214	+			12308	GDASLLARL	9	48	458.2652000621537	914.5158471911075	2	458.2664794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GDASLLARL_	ENSG00000177706|ENST00000313766|FAM20C	54.776311868738084	0.25715957988447635	6				NaN	NaN	0	NaN	12641	4069	16711
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16713	41.95	NaN	2536.2	30	0	249.62	0.106	+			47552	VRAPCLLR	8	57	464.2823908679015	926.550228802603	2	464.2850341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VRAPCLLR_	ENST00000535372.1_1_6:160182454-160183030:-|nuORF;ENST00000546087.5_2_6:160182454-160182694:-|nuORF	30.503639358989545	0.7238069182250283	6				NaN	NaN	0	NaN	12642	4069	16711
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16714	41.952	NaN	6600	30	0	451.92	0.106			+	17496	IDEIVHNKL	9	72	540.8065573857098	1079.5985618382194	2	540.80908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IDEIVHNKL_	REV__ENSG00000024526|ENST00000456315|DEPDC1;REV__ENSG00000035499|ENST00000265036|DEPDC1B;REV__ENST00000421655.1_1_9:108520752-108520932:+|nuORF;REV__ENST00000512078.5_1_5:59893582-59984814:-|nuORF;REV__nc|ENSG00000024526|Q5TB30-2|DEPDC1;REV__nc|ENSG00000035499|Q8WUY9-2|DEPDC1B	44.377184641726394	0.36891676396732553	6				NaN	NaN	0	NaN	12643	4069	16711
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16715	41.954	NaN	3118.5	30	0	205.81	0.106	+			22226	KSVYWENTL	9	73	570.2926072966028	NaN	0	570.2930297851562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KSVYWENTL_	ENSG00000111581|ENST00000229179|NUP107;nc|ENSG00000111581|P57740-2|NUP107;nc|ENSG00000111581|P57740-3|NUP107	51.19269402634007	0.19847346126499396	6				NaN	NaN	0	NaN	12644	4069	16711
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16716	41.956	NaN	2839.7	30	0	188.53	0.106	+			8957	EFCRLRPL	8	62	517.2857942341101	1032.55703553502	2	517.288818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EFCRLRPL_	ENSG00000076928|ENST00000354532|ARHGEF1;ENST00000600274.5_1_19:42396347-42410935:+|nuORF;nc|ENSG00000076928|Q92888-2|ARHGEF1;nc|ENSG00000076928|Q92888-3|ARHGEF1	51.33545320467046	0.5859736979383976	6				NaN	NaN	0	NaN	12645	4069	16711
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16717	41.958	NaN	2010.7	30	0	214.22	0.106			+	29968	PNWRSKTLF	9	43	383.5450744628906	NaN	0	383.5450744628906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PNWRSKTLF_	REV__ENST00000327473.8_1_19:4655256-4655514:+|nuORF	26.69291269510374	0.34280015626154364	6				NaN	NaN	0	NaN	12646	4069	16711
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16718	41.959	NaN	2418.2	30	0	175.86	0.036				-1	LSQMAFQIL	9	67	533.7852783203125	NaN	0	533.7852783203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_LSQM(Oxidation (M))AFQIL_	DNAH11|p.A4348Tfs*8|1|0.06|ENSG00000105877|chr7:21894990-21894991|-/CACTTTA|frameshift_variant;DNAH11|p.T4414Nfs*34|1|0.37|ENSG00000105877|chr7:21900050-21900051|-/A|frameshift_variant;DNAH11|p.T4414Qfs*72|3|0.34|ENSG00000105877|chr7:21900051-21900051|A/-|frameshift_variant;ENSG00000105877|ENST00000409508|DNAH11	39.252832667884924	0.27938773122138094	6				NaN	NaN	0	NaN	12647	4069	16711
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16731	41.987	NaN	13360	30	0	1792.6	0.214	+			13257	GIPMVIALNM	10	78	545.7858198537796	1089.557086774359	2	545.7880249023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_GIPM(Oxidation (M))VIALNM(Oxidation (M))_	tr|U7SJW1|U7SJW1_FUSNUFerrousirontransportproteinBOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02106PE=3SV=1	47.91560031466742	0.4762067885998563	6				NaN	NaN	0	NaN	12657	4072	16730
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16732	41.991	NaN	13743	30	0	979.48	0.106				-1	 	0	75	502.80911515359776	1003.6036773739955	2	502.8106384277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12658	4072	16730
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16733	41.993	NaN	6408.7	30	0	872.22	0.106			+	17874	IGAGEKFWS	9	68	497.7536452032642	993.4927374733285	2	497.75506591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IGAGEKFWS_	REV__SIGLEC12|p.D196G|1|0.37|ENSG00000254521|chr19:51500141-51500141|T/C|missense_variant	44.377184641726394	0.36891676396732553	6				NaN	NaN	0	NaN	12659	4072	16730
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16734	41.995	NaN	4013.5	30	0	463.97	0.106			+	34109	RSRALFAR	8	68	488.79254639160547	975.570539850011	2	488.7945556640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RSRALFAR_	REV__ENST00000503811.5_1_5:138629500-138629704:+|nuORF	52.936696900407355	0.5717071646657654	6				NaN	NaN	0	NaN	12660	4072	16730
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16735	41.997	NaN	6510.3	30	0	1934.5	0.106	+			32630	QYSQHISLF	9	71	561.7818160835758	1121.5490792339515	2	561.7822875976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QYSQHISLF_	ENSG00000163072|ENST00000317647|NOSTRIN;ENST00000486873.2_1_2:169699570-169711975:+|nuORF;nc|ENSG00000163072|Q8IVI9-2|NOSTRIN;nc|ENSG00000163072|Q8IVI9-3|NOSTRIN;nc|ENSG00000163072|Q8IVI9-4|NOSTRIN;NOSTRIN|p.K461Rfs*5|1|0.24|ENSG00000163072|chr2:168862044-168862044|A/-|frameshift_variant;NOSTRIN|p.L407*|1|0.21|ENSG00000163072|chr2:168860830-168860830|T/-|frameshift_variant	56.72105179125745	0.24094814563026265	6				NaN	NaN	0	NaN	12661	4072	16730
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16736	41.998	NaN	6398.7	30	0	1412.4	0.038	+			50582	YCSRFMSHF	9	73	597.2470479045284	1192.4795428758566	2	597.2489013671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_YCSRFM(Oxidation (M))SHF_	ENSG00000176136|ENST00000589410|MC5R;MC5R|p.F297Lfs*11|1|0.07|ENSG00000176136|chr18:13826652-13826653|-/T|frameshift_variant	42.396135135203025	0.392153681582562	6				NaN	NaN	0	NaN	12662	4072	16730
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16737	41.999	NaN	4821.3	30	0	606.02	0.141			+	11540	FPGFLGSFFS	10	68	553.2697869105941	1104.5250208879881	2	553.2709350585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FPGFLGSFFS_	REV__ENST00000597160.1_1_19:48000164-48018221:-|nuORF	49.44154591367651	0.46214596422418036	6				NaN	NaN	0	NaN	12663	4072	16730
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16750	42.03	NaN	9664.4	30	0	1164	0.214			+	13084	GFQSTRTKAT	10	84	548.790856242811	1095.5671595524218	2	548.7931518554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GFQSTRTKAT_	REV__ENSG00000143437|ENST00000358595|ARNT;REV__nc|ENSG00000143437|P27540-2|ARNT;REV__nc|ENSG00000143437|P27540-3|ARNT;REV__nc|ENSG00000143437|P27540-4|ARNT	70.8162118820467	0.27065172005956	6				NaN	NaN	0	NaN	12673	4075	16749
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16751	42.033	NaN	7414.5	30	0	630.89	0.106			+	8620	ECVQHVYSVI	10	75	588.7896441711008	1175.5647354090015	2	588.7918701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ECVQHVYSVI_	REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-10|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-13|TTN;REV__nc|ENSG00000155657|Q8WZ42-2|TTN;REV__nc|ENSG00000155657|Q8WZ42-3|TTN;REV__nc|ENSG00000155657|Q8WZ42-4|TTN;REV__nc|ENSG00000155657|Q8WZ42-5|TTN;REV__nc|ENSG00000155657|Q8WZ42-7|TTN;REV__nc|ENSG00000155657|Q8WZ42-8|TTN;REV__nc|ENSG00000155657|Q8WZ42-9|TTN;REV__nc|ENSG00000155657|Q8WZ42|TTN;REV__TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;REV__TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;REV__TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant	56.632244143249146	0.3964695498866976	6				NaN	NaN	0	NaN	12674	4075	16749
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16752	42.035	NaN	4672	30	0	328.63	0.106	+			49580	VYENVSHFL	9	67	554.275389714917	1106.5362264966338	2	554.2783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYENVSHFL_	ENSG00000164933|ENST00000297578|SLC25A32	90.60085204095205	0.06317133949006545	6				NaN	NaN	0	NaN	12675	4075	16749
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16753	42.037	NaN	2505	30	0	259.68	0.106			+	13309	GKGGAGGD	8	73	618.2837711773665	617.2764947107664	1	618.2855834960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GKGGAGGD_	REV__ENSG00000132470|ENST00000200181|ITGB4;REV__ITGB4|p.T1720Rfs*13|1|0.05|ENSG00000132470|chr17:75757046-75757052|GACCACT/-|frameshift_variant	19.359975847455235	0.7988239741663654	6				NaN	NaN	0	NaN	12676	4075	16749
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16754	42.039	NaN	5889.1	30	0	621.32	0.106	+			23831	LCVAVVESM	9	67	533.2514427788977	1064.4883326245954	2	533.7537841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Acetyl (Protein N-term),Carbamidomethyl (C),Oxidation (M)	_(Acetyl (Protein N-term))LC(Carbamidomethyl (C))VAVVESM(Oxidation (M))_	ENST00000456291.1_3_9:123636327-123638204:-|nuORF	60.29395666154354	0.21116425950210296	6				NaN	NaN	0	NaN	12677	4075	16749
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16755	42.041	NaN	3155.3	30	0	389.64	0.106	+			50600	YDMTVPKL	8	66	483.750636577387	965.486720221574	2	483.75146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YDMTVPKL_	AHNAK|p.K2311Rfs*11|1|0.33|ENSG00000124942|chr11:62527487-62527487|G/-|frameshift_variant;AHNAK|p.K5709Sfs*35|1|0.22|ENSG00000124942|chr11:62517291-62517291|T/-|frameshift_variant;AHNAK|p.L2124Ifs*37|1|0.04|ENSG00000124942|chr11:62528048-62528049|-/ATGCCTGATA|frameshift_variant;AHNAK|p.S1888Qfs*8|1|0.11|ENSG00000124942|chr11:62528755-62528756|-/G|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK	58.78195531508484	0.5138399468736706	6				NaN	NaN	0	NaN	12678	4075	16749
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16756	42.043	NaN	2859.3	30	0	265.52	0.034			+	16890	HPIEHLLI	8	63	486.28809444300003	970.5616359528001	2	486.28924560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_HPIEHLLI_	REV__ENSG00000165915|ENST00000362021|SLC39A13;REV__ENST00000527829.1_1_11:47435993-47436711:+|nuORF;REV__nc|ENSG00000165915|Q96H72-2|SLC39A13;REV__SLC39A13|p.Q301Vfs*38|1|0.53|ENSG00000165915|chr11:47414891-47414892|CA/-|frameshift_variant	29.841539824830324	0.7289191502596711	6				NaN	NaN	0	NaN	12679	4075	16749
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16768	42.07	NaN	3624	30	0	261.66	0.214				-1	 	0	62	347.1977423791496	692.3809318250992	2	347.19873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12688	4078	16767
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16769	42.073	NaN	4829.1	30	0	1099.1	0.106			+	33356	RHKRGLSA	8	61	462.77818541026744	923.5418178873349	2	462.7791748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RHKRGLSA_	REV__ENSG00000165553|ENST00000298352|NGB	30.503639358989545	0.7238069182250283	6				NaN	NaN	0	NaN	12689	4078	16767
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16770	42.075	NaN	9632.8	30	0	1381.9	0.106	+			1561	AGGGKKGG	8	68	316.1795710224049	630.3445891116098	2	316.180419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AGGGKKGG_	ENSG00000109061|ENST00000226207|MYH1;MYH1|p.N889Mfs*24|1|0.19|ENSG00000109061|chr17:10504835-10504835|T/-|frameshift_variant	14.664097394203935	0.7913966407026132	6				NaN	NaN	0	NaN	12690	4078	16767
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16771	42.077	NaN	2402.1	30	0	272.99	0.106				-1	 	0	56	415.25254184411074	414.24526537751075	1	415.25372314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12691	4078	16767
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16772	42.079	NaN	3337.9	30	0	324.97	0.106	+			49563	VYDQQREVY	9	74	600.2882534851121	1198.5619540370242	2	600.2906494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VYDQQREVY_	CEP55|p.D247Ifs*9|1|0.25|ENSG00000138180|chr10:93516987-93516987|A/-|frameshift_variant;ENSG00000138180|ENST00000371485|CEP55;nc|ENSG00000138180|Q53EZ4-2|CEP55	39.252832667884924	0.4290233611298554	6				NaN	NaN	0	NaN	12692	4078	16767
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16773	42.081	NaN	3285.5	30	0	459.98	0.106	+			14794	GTLDFYMAR	9	66	537.2565538984937	1072.4985548637874	2	537.258056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GTLDFYMAR_	ENSG00000064961|ENST00000333651|HMG20B;ENST00000461099.1_1_19:3576912-3578370:+|nuORF;ENST00000488973.6_1_19:3574329-3578516:+|nuORF;nc|ENSG00000064961|Q9P0W2-2|HMG20B;nc|ENSG00000064961|Q9P0W2-3|HMG20B	62.107414245175825	0.1960472003779324	6				NaN	NaN	0	NaN	12693	4078	16767
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16774	42.082	NaN	2354	30	0	277.9	0.035			+	31277	QHYPLASSL	9	61	508.2645288404964	1014.5145047477928	2	508.26580810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_QHYPLASSL_	REV__ENSG00000197016|ENST00000330619|ZNF470;REV__nc|ENSG00000197016|Q6ECI4-2|ZNF470	37.81151784470057	0.4459294069877048	6				NaN	NaN	0	NaN	12694	4078	16767
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16781	42.099	NaN	5112.5	30	0	813.61	0.214	+			51077	YLPAGQSVL	9	66	474.26193083506473	946.5093087369295	2	474.26318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YLPAGQSVL_	ENSG00000167085|ENST00000300408|PHB1;nc|ENSG00000167085|P35232-2|PHB1	52.936696900407355	0.27249468807391813	6				NaN	NaN	0	NaN	12698	4081	16780
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16782	42.103	NaN	3380.9	30	0	214.8	0.106				-1	YLCLRGCPL	9	72	576.2887363446563	1150.5629197561125	2	576.2910766601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_YLC(Carbamidomethyl (C))LRGC(Carbamidomethyl (C))PL_	ENSG00000182175|ENST00000329082|RGMA;nc|ENSG00000182175|Q96B86-3|RGMA;nc|ENSG00000182175|Q96B86-4|RGMA	44.53106598305862	0.36711179743858174	6				NaN	NaN	0	NaN	12699	4081	16780
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16783	42.105	NaN	2818.7	30	0	236.57	0.106			+	21422	KMVKHIRI	8	66	512.823974609375	NaN	0	512.823974609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KMVKHIRI_	REV__C6|p.E604Gfs*23|1|0.65|ENSG00000039537|chr5:41159127-41159128|-/C|frameshift_variant;REV__C6|p.K582Efs*9|1|0.05|ENSG00000039537|chr5:41159193-41159194|TT/-|frameshift_variant;REV__ENSG00000039537|ENST00000337836|C6	50.0245360154114	1.7418937515398478	6				NaN	NaN	0	NaN	12700	4081	16780
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16784	42.107	NaN	3796.7	30	0	283.88	0.106			+	50994	YIRLLLCW	8	73	568.8193857571341	1135.6242185810681	2	568.821533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_YIRLLLC(Carbamidomethyl (C))W_	REV__ENST00000366527.4_3_1:245017330-245017447:-|nuORF	65.89745868150666	0.44339748671293633	6				NaN	NaN	0	NaN	12701	4081	16780
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16785	42.109	NaN	1960.2	30	0	160.45	0.106			+	-1	QAQERRENQM	10	71	653.3041918111543	1304.5938306891085	2	653.3056640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_QAQERRENQM(Oxidation (M))_	REV__ENSG00000107951|ENST00000263063|MTPAP;REV__ENST00000488290.5_1_10:30602540-30654262:-|nuORF;REV__MTPAP|p.G449Wfs*7|1|0.49|ENSG00000107951|chr10:30316004-30316005|-/A|frameshift_variant;REV__MTPAP|p.L388Sfs*12|1|0.41|ENSG00000107951|chr10:30322449-30322449|A/-|frameshift_variant;REV__nc|ENSG00000107951|Q9NVV4-2|MTPAP	29.170058357718403	0.6416167986984785	6				NaN	NaN	0	NaN	12702	4081	16780
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16786	42.11	NaN	1064.8	30	0	62.145	0.106				-1	GVGEDPSSCG	10	45	322.1271091748861	NaN	0	322.1271667480469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_GVGEDPSSC(Carbamidomethyl (C))G_	ENST00000354336.7_1_22:21271769-21272156:+|nuORF	29.170058357718403	0.40439580130713204	6				NaN	NaN	0	NaN	12703	4081	16780
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16787	42.112	NaN	3421.4	30	0	745.12	0.034	+			19375	KALRKARP	8	65	470.3141968671158	938.6138408010316	2	470.3157043457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KALRKARP_	ENSG00000081237|ENST00000442510|PTPRC;nc|ENSG00000081237|P08575-10|PTPRC;nc|ENSG00000081237|P08575-4|PTPRC;nc|ENSG00000081237|P08575-5|PTPRC;nc|ENSG00000081237|P08575-6|PTPRC;nc|ENSG00000081237|P08575-7|PTPRC;nc|ENSG00000081237|P08575-8|PTPRC;nc|ENSG00000081237|P08575-9|PTPRC;PTPRC|p.N1239Tfs*17|1|0.43|ENSG00000081237|chr1:198755972-198755972|A/-|frameshift_variant	18.324413293986947	0.7971860551947066	6				NaN	NaN	0	NaN	12704	4081	16780
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16799	42.138	NaN	5600.4	30	0	703.89	0.214	+			11827	FSVPGGHKLY	10	74	552.7976316947436	1103.580710456287	2	552.8012084960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FSVPGGHKLY_	ENSG00000183347|ENST00000370456|GBP6;GBP6|p.N587Kfs*2|1|0.28|ENSG00000183347|chr1:89385321-89385322|-/A|frameshift_variant;GBP6|p.N587Mfs*18|2|0.17|ENSG00000183347|chr1:89385322-89385322|A/-|frameshift_variant;nc|ENSG00000183347|Q6ZN66-2|GBP6	59.93077597824379	0.36646980200755325	6				NaN	NaN	0	NaN	12713	4084	16798
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16800	42.141	NaN	3876.3	30	0	657.3	0.106	+			36277	SEPDMIKQVL	10	76	580.3034765724783	1158.5924002117565	2	580.3056030273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SEPDMIKQVL_	ENSG00000059377|ENST00000448866|TBXAS1;ENST00000462275.5_1_7:139529186-139716213:+|nuORF;nc|ENSG00000059377|P24557-2|TBXAS1;nc|ENSG00000059377|P24557-3|TBXAS1;nc|ENSG00000059377|P24557-4|TBXAS1	56.43379154798735	0.3982744522255666	6				NaN	NaN	0	NaN	12714	4084	16798
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16801	42.143	NaN	2636.3	30	0	370.33	0.106			+	-1	ADQRHVMVI	9	69	542.7853650062202	NaN	0	542.7874145507812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_ADQRHVM(Oxidation (M))VI_	REV__ENSG00000156304|ENST00000286835|SCAF4;REV__ENST00000467731.1_1_21:33057290-33073360:-|nuORF;REV__nc|ENSG00000156304|O95104-2|SCAF4;REV__nc|ENSG00000156304|O95104-3|SCAF4;REV__SCAF4|p.E653Qfs*24|1|0.4|ENSG00000156304|chr21:31688393-31688394|-/TG|frameshift_variant;REV__SCAF4|p.V1113Cfs*7|1|0.22|ENSG00000156304|chr21:31671506-31671506|C/-|frameshift_variant	37.15910966729921	0.2899585034171616	6				NaN	NaN	0	NaN	12715	4084	16798
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16802	42.145	NaN	3890.3	30	0	193.85	0.106			+	8982	EFNQETGLLL	10	73	582.3014960995285	1162.588439265857	2	582.3025512695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EFNQETGLLL_	REV__ENST00000469937.2_1_7:46729000-46799342:-|nuORF	72.87924865735499	0.25379688738724415	6				NaN	NaN	0	NaN	12716	4084	16798
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16803	42.147	NaN	1966.9	30	0	168.26	0.106	+			44773	TTPVSALQY	9	60	490.2590443488561	978.5035357645122	2	490.2601013183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TTPVSALQY_	ENSG00000112706|ENST00000369950|IMPG1;IMPG1|p.N767Ifs*7|1|0.38|ENSG00000112706|chr6:75923650-75923650|T/-|frameshift_variant	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	12717	4084	16798
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16804	42.149	NaN	2724.8	30	0	221.89	0.035				-1	PLSARRGDC	9	74	516.2567138671875	NaN	0	516.2567138671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_PLSARRGDC(Carbamidomethyl (C))_	ENSG00000078399|ENST00000343483|HOXA9	42.396135135203025	0.2590952873412954	6				NaN	NaN	0	NaN	12718	4084	16798
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16816	42.175	NaN	18053	30	0	2358.4	0.215	+			14937	GTMEWIMIK	9	92	562.7763499699823	1123.5381470067646	2	562.7780151367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_GTM(Oxidation (M))EWIMIK_	ENSG00000168273|ENST00000477703|UQCC5	110.11987700582712	0.028875675806141952	6				NaN	NaN	0	NaN	12727	4087	16815
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16817	42.178	NaN	9832.5	30	0	670.55	0.106	+			28453	NFFPLWKM	8	79	549.7749942889945	1097.535435644789	2	549.777099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_NFFPLWKM(Oxidation (M))_	ENST00000446044.5_1_3:50686099-50686255:+|nuORF	76.84663266511073	0.3498490246073164	6				NaN	NaN	0	NaN	12728	4087	16815
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16818	42.18	NaN	6076.9	30	0	286.42	0.106				-1	 	0	75	369.2108530715185	736.407153209837	2	369.2119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12729	4087	16815
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16819	42.182	NaN	5169.1	30	0	1094.4	0.106			+	14764	GTKSNLKFL	9	62	336.5344378546052	NaN	0	336.5341491699219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GTKSNLKFL_	REV__ENSG00000158987|ENST00000509018|RAPGEF6;REV__nc|ENSG00000158987|Q8TEU7-2|RAPGEF6;REV__nc|ENSG00000158987|Q8TEU7-3|RAPGEF6;REV__nc|ENSG00000158987|Q8TEU7-4|RAPGEF6;REV__nc|ENSG00000158987|Q8TEU7-5|RAPGEF6;REV__RAPGEF6|p.L1388*|1|0.25|ENSG00000158987|chr5:131431161-131431161|A/-|frameshift_variant	23.04248740728303	0.3589936788096251	6				NaN	NaN	0	NaN	12730	4087	16815
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16820	42.184	NaN	10518	30	0	3297.4	0.106	+			28270	NDWEAKGI	8	65	466.7272903043457	931.4400276754914	2	466.7286071777344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NDWEAKGI_	ENSG00000162924|ENST00000394479|REL;nc|ENSG00000162924|Q04864|REL	55.50420428727701	0.5462892107279674	6				NaN	NaN	0	NaN	12731	4087	16815
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16821	42.186	NaN	3135.9	30	0	188.81	0.106				-1	 	0	66	391.2238573664646	780.4331617997292	2	391.2248840332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12732	4087	16815
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16822	42.188	NaN	6165.8	30	0	633.83	0.037	+			45556	TYLEKFQNL	9	76	578.3036480182411	1154.5927431032821	2	578.3059692382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TYLEKFQNL_	ENSG00000103351|ENST00000576634|CLUAP1;ENST00000572632.1_1_16:3569992-3580585:+|nuORF;nc|ENSG00000103351|Q96AJ1-2|CLUAP1	54.776311868738084	0.25715957988447635	6				NaN	NaN	0	NaN	12733	4087	16815
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16839	42.223	NaN	4128.6	30	0	447.9	0.214			+	-1	AILCGVVKK	9	64	494.30631604520187	986.5980791572038	2	494.3076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_AILC(Carbamidomethyl (C))GVVKK_	REV__ENSG00000141446|ENST00000269214|ESCO1	47.91560031466742	0.327412564698279	6				NaN	NaN	0	NaN	12747	4090	16838
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16840	42.226	NaN	2408.8	30	0	339.08	0.106			+	29683	PGSEPMNAI	9	62	458.2144689737933	914.4143850143867	2	458.2148742675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PGSEPMNAI_	REV__ENSG00000197930|ENST00000395686|ERO1A;REV__ENST00000395686.7_1_14:53112928-53112961:-|nuORF;REV__ENST00000553714.1_1_14:53110290-53113110:-|nuORF;REV__ENST00000554019.5_1_14:53110290-53130527:-|nuORF	55.50420428727701	0.2510918378945873	6				NaN	NaN	0	NaN	12748	4090	16838
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16841	42.228	NaN	3191.5	30	0	291.82	0.106	+			45592	TYNYPVHYF	9	71	602.2753157495818	1202.5360785659634	2	602.2770385742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TYNYPVHYF_	ENSG00000112697|ENST00000230461|TMEM30A;nc|ENSG00000112697|Q9NV96-2|TMEM30A;nc|ENSG00000112697|Q9NV96-3|TMEM30A	71.29570347882199	0.13518600952103718	6				NaN	NaN	0	NaN	12749	4090	16838
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16842	42.23	NaN	7576.8	30	0	927.42	0.106	+			42182	SYVQVTSNF	9	77	522.752320213841	1043.490087494482	2	522.7548217773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SYVQVTSNF_	ENSG00000072364|ENST00000265343|AFF4	81.52500206392136	0.09095445986635249	6				NaN	NaN	0	NaN	12750	4090	16838
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16843	42.232	NaN	4683.8	30	0	317.39	0.106			+	-1	FYILFGIAM	9	64	545.7858198537796	1089.557086774359	2	546.2814331054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_FYILFGIAM(Oxidation (M))_	REV__ENSG00000003989|ENST00000494857|SLC7A2;REV__nc|ENSG00000003989|P52569-2|SLC7A2;REV__nc|ENSG00000003989|P52569-3|SLC7A2	49.21078951299608	0.3122205139198386	6				NaN	NaN	0	NaN	12751	4090	16838
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16844	42.234	NaN	1569.8	30	0	157.28	0.034			+	35669	SDERLHIS	8	54	478.74428009139456	955.4740072495891	2	478.7451477050781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SDERLHIS_	REV__ATP1A4|p.E557Nfs*4|1|0.1|ENSG00000132681|chr1:160171424-160171424|G/-|frameshift_variant;REV__ATP1A4|p.P701Lfs*20|1|0.3|ENSG00000132681|chr1:160174218-160174218|C/-|frameshift_variant;REV__ENSG00000132681|ENST00000368081|ATP1A4	29.14955571784316	0.7342621283720113	6				NaN	NaN	0	NaN	12752	4090	16838
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16845	42.234	NaN	2269.7	30	0	308.58	0.141				-1	 	0	68	558.2866393819614	557.2793629153614	1	558.2857666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12753	4090	16838
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16856	42.262	NaN	7239.8	30	0	684.62	0.214	+			10696	EYVSQHLVF	9	79	561.285532062389	NaN	0	561.2860107421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EYVSQHLVF_	ENSG00000128578|ENST00000249344|STRIP2;nc|ENSG00000128578|Q9ULQ0-2|STRIP2	58.78195531508484	0.1545138866451181	6				NaN	NaN	0	NaN	12761	4093	16855
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16857	42.266	NaN	5979.4	30	0	684.21	0.106				-1	VLICISLLT	9	71	516.3130025474893	1030.6114521617785	2	516.31591796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_VLIC(Carbamidomethyl (C))ISLLT_	L1PA6_dup546|chr2:49227587-49231532:-|4.547726375381561|0.2927699401366612|3.96|483.0|173|2|anti-sense	47.91560031466742	0.327412564698279	6				NaN	NaN	0	NaN	12762	4093	16855
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16858	42.268	NaN	5841.2	30	0	1069.4	0.106	+			8450	EARRHIII	8	71	504.30909424529983	1006.6036355573997	2	504.3106384277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EARRHIII_	ENSG00000171115|ENST00000307271|GIMAP8;GIMAP8|p.F591Lfs*24|1|0.17|ENSG00000171115|chr7:150477551-150477551|T/-|frameshift_variant;GIMAP8|p.N151Kfs*12|1|0.36|ENSG00000171115|chr7:150467143-150467144|-/A|frameshift_variant;GIMAP8|p.S261Vfs*22|1|0.25|ENSG00000171115|chr7:150474106-150474106|A/-|frameshift_variant;GIMAP8|p.T275Sfs*6|1|0.06|ENSG00000171115|chr7:150474152-150474153|-/GTCTCTT|frameshift_variant	29.14955571784316	0.7342621283720113	6				NaN	NaN	0	NaN	12763	4093	16855
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16859	42.269	NaN	5242.3	30	0	323.9	0.106	+			49626	VYIAGQQAF	9	72	498.76132962496797	NaN	0	498.76116943359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VYIAGQQAF_	ENSG00000143889|ENST00000449105|HNRNPLL;nc|ENSG00000143889|Q8WVV9-2|HNRNPLL;nc|ENSG00000143889|Q8WVV9-3|HNRNPLL;nc|ENSG00000143889|Q8WVV9-4|HNRNPLL;nc|ENSG00000143889|Q8WVV9-5|HNRNPLL	94.00642277110589	0.0335199496031268	6				NaN	NaN	0	NaN	12764	4093	16855
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16860	42.271	NaN	4661.5	30	0	613.94	0.106			+	11160	FGMSRLQEL	9	69	540.7796145908868	1079.5446762485735	2	540.7828369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FGMSRLQEL_	REV__ENSG00000175520|ENST00000311659|UBQLN3	95.81516180277367	0.04847050768394289	6				NaN	NaN	0	NaN	12765	4093	16855
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16861	42.273	NaN	2451.2	30	0	281.58	0.106	+			13034	GEVQVWRI	8	66	493.77340377620044	985.5322546192009	2	493.7745666503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GEVQVWRI_	ENSG00000127831|ENST00000248444|VIL1	69.6276240434122	0.4100012001731381	6				NaN	NaN	0	NaN	12766	4093	16855
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16862	42.275	NaN	3699.6	30	0	281.23	0.037	+			49556	VYCQILKQL	9	80	582.8238205325132	1163.6330881318263	2	582.82666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_VYC(Carbamidomethyl (C))QILKQL_	ENSG00000169994|ENST00000409816|MYO7B;ENST00000496841.5_1_2:128377972-128392002:+|nuORF;nc|ENSG00000169994|Q6PIF6-2|MYO7B;nc|ENSG00000169994|Q6PIF6|MYO7B	53.351449002276354	0.2690372970092375	6				NaN	NaN	0	NaN	12767	4093	16855
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16873	42.3	NaN	16293	30	0	1582.1	0.214			+	6590	AYLQQQQQA	9	75	539.2703129718456	1076.526073010491	2	539.2718505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AYLQQQQQA_	REV__ENSG00000184863|ENST00000401878|RBM33;REV__ENST00000307403.6_1_7:155532339-155538302:+|nuORF;REV__RBM33|p.G1030Afs*52|1|0.29|ENSG00000184863|chr7:155763915-155763915|G/-|frameshift_variant;REV__RBM33|p.L1031Pfs*109|1|0.35|ENSG00000184863|chr7:155763914-155763915|-/G|frameshift_variant;REV__RBM33|p.P840Qfs*31|1|0.17|ENSG00000184863|chr7:155745138-155745138|C/-|frameshift_variant	68.484700416344	0.1473408039581241	6				NaN	NaN	0	NaN	12775	4096	16872
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16874	42.304	NaN	6076.1	30	0	1020.4	0.106			+	27787	MRSISWMK	8	71	519.766410520463	1037.5182681077258	2	519.76806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MRSISWMK_	REV__ENSG00000155850|ENST00000286298|SLC26A2	52.936696900407355	0.5717071646657654	6				NaN	NaN	0	NaN	12776	4096	16872
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16875	42.306	NaN	3543.2	30	0	522.26	0.106	+			12923	GESILKVNL	9	64	486.7891555107217	NaN	0	486.7889404296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GESILKVNL_	ENSG00000162174|ENST00000415229|ASRGL1;nc|ENSG00000162174|Q7L266-2|ASRGL1	52.936696900407355	0.1864545979552969	6				NaN	NaN	0	NaN	12777	4096	16872
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16876	42.308	NaN	4213	30	0	332.39	0.106	+			39890	STLRKVSTY	9	73	527.7985884278737	1053.5826239225473	2	527.80078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_STLRKVSTY_	ENSG00000187815|ENST00000372706|ZFP69	44.377184641726394	0.36891676396732553	6				NaN	NaN	0	NaN	12778	4096	16872
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16877	42.31	NaN	2130.5	30	0	209.97	0.106	+			42395	TAIVDKIGF	9	62	482.2781191805955	962.5416854279911	2	482.2787780761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TAIVDKIGF_	ENSG00000205339|ENST00000379719|IPO7;IPO7|p.D430Mfs*6|1|0.18|ENSG00000205339|chr11:9425208-9425208|A/-|frameshift_variant;IPO7|p.M511Cfs*3|1|0.19|ENSG00000205339|chr11:9429134-9429134|A/-|frameshift_variant	69.6276240434122	0.14239879520340665	6				NaN	NaN	0	NaN	12779	4096	16872
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16878	42.311	NaN	3421.3	30	0	776.36	0.106			+	-1	FFRVRMSI	8	65	536.2934509015033	1070.5723488698065	2	536.294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_FFRVRM(Oxidation (M))SI_	REV__ENSG00000120509|ENST00000239666|PDZD11;REV__nc|ENSG00000120509|Q5EBL8-2|PDZD11	35.61828744233558	0.6843154725607303	6				NaN	NaN	0	NaN	12780	4096	16872
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16879	42.313	NaN	1213	30	0	117.41	0.03			+	13127	GGKGAKGS	8	50	331.1847176546145	660.354882376029	2	331.1855163574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GGKGAKGS_	REV__ENSG00000102309|ENST00000373669|PIN4;REV__nc|ENSG00000102309|Q9Y237-2|PIN4;REV__nc|ENSG00000102309|Q9Y237-3|PIN4;REV__PIN4|p.G104Wfs*3|1|0.12|ENSG00000102309|chrX:72196901-72196902|-/T|frameshift_variant	8.231297230196988	0.7812220690224883	6				NaN	NaN	0	NaN	12781	4096	16872
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16892	42.34	NaN	4585.7	30	0	657.11	0.214	+			28940	NRPTDPASL	9	69	485.7519161993641	969.4892794655282	2	485.7526550292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NRPTDPASL_	ENSG00000115486|ENST00000233838|GGCX;ENST00000496962.1_1_2:85786016-85788551:-|nuORF;GGCX|p.P636Qfs*11|1|0.07|ENSG00000115486|chr2:85550732-85550732|G/-|frameshift_variant	82.30502934623384	0.08758161712619916	6				NaN	NaN	0	NaN	12791	4099	16891
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16893	42.344	NaN	4701.7	30	0	301.32	0.106			+	43806	TLMLLAGVTL	10	71	516.3130025474893	1030.6114521617785	2	515.8108520507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TLMLLAGVTL_	REV__ENSG00000134910|ENST00000392708|STT3A;REV__ENST00000525431.1_1_11:125476222-125478225:+|nuORF;REV__ENST00000531001.1_1_11:125478078-125479612:+|nuORF;REV__ENST00000534472.5_1_11:125465789-125479519:+|nuORF;REV__nc|ENSG00000134910|P46977-2|STT3A	67.49366992349736	0.29779660154124327	6				NaN	NaN	0	NaN	12792	4099	16891
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16894	42.346	NaN	4443.4	30	0	918.7	0.106				-1	ATMTFFKKK	9	69	373.20987774270935	NaN	0	373.2098693847656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_ATM(Oxidation (M))TFFKKK_	ENST00000487395.1_1_6:102376237-102441071:+|nuORF	32.81241826257853	0.3119040447479903	6				NaN	NaN	0	NaN	12793	4099	16891
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16895	42.348	NaN	4060.9	30	0	410.8	0.106				-1	 	0	67	508.79084636268504	1015.5671397921701	2	508.79205322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12794	4099	16891
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16896	42.35	NaN	2576.6	30	0	243.21	0.106	+			49764	VYPVFLFY	8	70	524.2848006255164	NaN	0	524.28466796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VYPVFLFY_	ENSG00000181704|ENST00000462683|YIPF6;nc|ENSG00000181704|Q96EC8-2|YIPF6	33.49298260027079	1.7418937515398478	6				NaN	NaN	0	NaN	12795	4099	16891
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16897	42.352	NaN	2577.4	30	0	255.65	0.106	+			638	ADYPAQSPL	9	63	481.23506342374003	960.4555739142801	2	481.23614501953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ADYPAQSPL_	ENSG00000099917|ENST00000263205|MED15;ENST00000473244.5_1_22:20936789-20940988:+|nuORF;ENST00000489651.5_1_22:20929276-20940988:+|nuORF;ENST00000492381.5_1_22:20909161-20940988:+|nuORF;ENST00000493216.1_1_22:20939554-20940988:+|nuORF;nc|ENSG00000099917|Q96RN5-2|MED15;nc|ENSG00000099917|Q96RN5-3|MED15	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	12796	4099	16891
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16898	42.353	NaN	1980.3	30	0	136.32	0.034	+			1193	AEPAAALALL	10	55	470.2776630649982	938.5407731967964	2	470.2789306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_AEPAAALALL_	ANGPTL6|p.G354Afs*115|1|0.27|ENSG00000130812|chr19:10093510-10093510|C/-|frameshift_variant;ENSG00000130812|ENST00000253109|ANGPTL6	47.91560031466742	0.4762067885998563	6				NaN	NaN	0	NaN	12797	4099	16891
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16909	42.377	NaN	5101.4	30	0	436.92	0.214			+	8956	EFCCRPKKF	9	77	579.283381369974	1156.552209806748	2	579.2848510742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EFCCRPKKF_	REV__ENST00000449297.6_1_6:56818586-56819281:-|nuORF	52.936696900407355	0.27249468807391813	6				NaN	NaN	0	NaN	12805	4102	16908
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16910	42.381	NaN	1540.6	30	0	76.82	0.106				-1	 	0	47	322.62487657930455	643.2352002254091	2	322.6266784667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12806	4102	16908
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16911	42.383	NaN	3824.6	30	0	269.85	0.106			+	28584	NKKNLSAQF	9	73	525.2908512064915	1048.567149479783	2	525.2918701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NKKNLSAQF_	REV__tr|U7STK2|U7STK2_FUSNU16SrRNA(-N2)-methyltransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01088PE=4SV=1	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	12807	4102	16908
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16912	42.384	NaN	3692.9	30	0	536.77	0.106			+	43387	TGFWWGGSLSK	11	71	613.3033911931146	1224.5922294530292	2	613.3056030273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TGFWWGGSLSK_	REV__ENSG00000167772|ENST00000301455|ANGPTL4;REV__nc|ENSG00000167772|Q9BY76-2|ANGPTL4;REV__nc|ENSG00000167772|Q9BY76-3|ANGPTL4	74.1650062923329	0.2010173757047072	6				NaN	NaN	0	NaN	12808	4102	16908
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16913	42.386	NaN	4866.4	30	0	542.22	0.106	+			29502	PDERFDFL	8	70	519.7480428698127	1037.4815328064253	2	519.7503051757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PDERFDFL_	ENSG00000138430|ENST00000284719|OLA1;nc|ENSG00000138430|Q9NTK5-3|OLA1	38.80614096846853	0.6637206697844082	6				NaN	NaN	0	NaN	12809	4102	16908
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16914	42.388	NaN	3560.9	30	0	389.45	0.106	+			33276	RGIMPFPTEE	10	75	588.7896441711008	1175.5647354090015	2	588.7916870117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_RGIMPFPTEE_	ENSG00000141968|ENST00000602142|VAV1;nc|ENSG00000141968|P15498-2|VAV1	53.08895987439943	0.42869529153390606	6				NaN	NaN	0	NaN	12810	4102	16908
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16915	42.39	NaN	3699.6	30	0	256.19	0.036	+			7428	DEVICAVNLK	10	74	552.2925724427728	NaN	0	552.2921752929688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_DEVICAVNLK_	ENSG00000112367|ENST00000230124|FIG4	52.936696900407355	0.28703625529470256	6				NaN	NaN	0	NaN	12811	4102	16908
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16925	42.412	NaN	1821.4	30	0	191.97	0.214			+	10146	ESSFAKYI	8	60	472.7391704514965	NaN	0	472.73919677734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ESSFAKYI_	REV__ENSG00000138496|ENST00000682323|PARP9;REV__nc|ENSG00000138496|Q8IXQ6-3|PARP9;REV__nc|ENSG00000138496|Q8IXQ6|PARP9;REV__PARP9|p.T633Pfs*5|2|0.22|ENSG00000138496|chr3:122537047-122537047|T/-|frameshift_variant	53.351449002276354	1.7418937515398478	6				NaN	NaN	0	NaN	12818	4105	16924
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16926	42.415	NaN	1835.4	30	0	118.51	0.106				-1	 	0	55	347.1977423791496	692.3809318250992	2	347.1985168457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12819	4105	16924
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16927	42.417	NaN	1997.9	30	0	140.74	0.106			+	13920	GRNPLPPDGQW	11	67	618.8090615493163	1235.6035701654325	2	618.8109130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GRNPLPPDGQW_	REV__ENST00000339488.8_2_6:48036008-48036398:-|nuORF	31.634271133179894	0.6579734920221648	6				NaN	NaN	0	NaN	12820	4105	16924
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16928	42.419	NaN	2558.8	30	0	159.85	0.106			+	-1	ICCFLSVIH	9	72	574.7844756959432	NaN	0	574.7842407226562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_IC(Carbamidomethyl (C))C(Carbamidomethyl (C))FLSVIH_	REV__ENSG00000092439|ENST00000646667|TRPM7	71.37791200682192	0.10092813839350395	6				NaN	NaN	0	NaN	12821	4105	16924
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16929	42.421	NaN	2090.9	30	0	265.9	0.106			+	25840	LSEEDHNKL	9	67	542.7685546875	NaN	0	542.7685546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSEEDHNKL_	REV__EIF4G1|p.P1229Qfs*2|1|0.18|ENSG00000114867|chr3:184327606-184327606|C/-|frameshift_variant;REV__EIF4G3|p.A945Qfs*16|1|0.25|ENSG00000075151|chr1:20864482-20864482|T/-|frameshift_variant;REV__EIF4G3|p.F1258Lfs*2|1|0.43|ENSG00000075151|chr1:20840975-20840975|A/-|frameshift_variant;REV__EIF4G3|p.I1064Nfs*6|1|0.32|ENSG00000075151|chr1:20855052-20855053|-/T|frameshift_variant;REV__ENSG00000075151|ENST00000602326|EIF4G3;REV__ENSG00000114867|ENST00000346169|EIF4G1;REV__ENST00000442406.5_1_3:184038690-184052693:+|nuORF;REV__nc|ENSG00000075151|O43432-3|EIF4G3;REV__nc|ENSG00000075151|O43432-4|EIF4G3;REV__nc|ENSG00000075151|O43432|EIF4G3;REV__nc|ENSG00000114867|Q04637-3|EIF4G1;REV__nc|ENSG00000114867|Q04637-4|EIF4G1;REV__nc|ENSG00000114867|Q04637-5|EIF4G1;REV__nc|ENSG00000114867|Q04637-6|EIF4G1;REV__nc|ENSG00000114867|Q04637-7|EIF4G1;REV__nc|ENSG00000114867|Q04637-8|EIF4G1;REV__nc|ENSG00000114867|Q04637-9|EIF4G1	49.44154591367651	0.21054156626303966	6				NaN	NaN	0	NaN	12822	4105	16924
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16930	42.423	NaN	3013.4	30	0	305.81	0.106	+			4000	ATCDFPLLNR	10	67	603.7989217315192	1205.5832905298382	2	604.3015747070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Carbamidomethyl (C)	_ATC(Carbamidomethyl (C))DFPLLNR_	ENSG00000104142|ENST00000220509|VPS18	52.936696900407355	0.4300801048568001	6				NaN	NaN	0	NaN	12823	4105	16924
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16931	42.424	NaN	1941.9	30	0	184.32	0.034	+			11537	FPFLPPSL	8	62	459.2593735026	NaN	0	459.25909423828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FPFLPPSL_	ENST00000465299.1_3_6:145157593-145158348:+|nuORF	62.97842346883844	1.7418937515398478	6				NaN	NaN	0	NaN	12824	4105	16924
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16942	42.448	NaN	4733.9	30	0	467.07	0.214			+	47928	VSLWLLLM	8	65	495.78876413468055	989.5629753361611	2	495.7901916503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_VSLWLLLM(Oxidation (M))_	REV__ENSG00000141556|ENST00000355528|TBCD;REV__nc|ENSG00000141556|Q9BTW9-4|TBCD;REV__nc|ENSG00000141556|Q9BTW9-5|TBCD	44.53106598305862	0.628196326904373	6				NaN	NaN	0	NaN	12832	4108	16941
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16943	42.452	NaN	2773	30	0	264.08	0.106			+	12377	GDSYPTRQIY	10	73	600.2884634817542	1198.5623740303083	2	600.2901000976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GDSYPTRQIY_	REV__ENSG00000127990|ENST00000648936|SGCE;REV__nc|ENSG00000127990|O43556-3|SGCE;REV__nc|ENSG00000127990|O43556-4|SGCE	31.529811441608018	0.6223461015008678	6				NaN	NaN	0	NaN	12833	4108	16941
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16944	42.454	NaN	2908.3	30	0	256.62	0.106			+	-1	MERVKFGEP	9	62	554.7747952610443	1107.5350375888886	2	554.7772827148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))ERVKFGEP_	REV__ENSG00000135596|ENST00000358807|MICAL1;REV__ENST00000456101.6_1_6:109773431-109775944:-|nuORF;REV__MICAL1|p.T754Qfs*150|1|0.53|ENSG00000135596|chr6:109446741-109446741|C/-|frameshift_variant;REV__nc|ENSG00000135596|Q8TDZ2-2|MICAL1;REV__nc|ENSG00000135596|Q8TDZ2-4|MICAL1	44.377184641726394	0.36891676396732553	6				NaN	NaN	0	NaN	12834	4108	16941
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16945	42.455	NaN	947.55	30	0	94.161	0.106				-1	 	0	43	462.7779715499758	923.5413901667516	2	462.7803039550781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12835	4108	16941
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16946	42.457	NaN	2211.3	30	0	168.94	0.035	+			31189	QGPNPVVVVL	10	53	511.30544294970434	NaN	0	511.30548095703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QGPNPVVVVL_	ENSG00000117408|ENST00000372343|IPO13	40.77816245573522	0.36390427802201647	6				NaN	NaN	0	NaN	12836	4108	16941
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16957	42.481	NaN	6227	30	0	1150.1	0.214	+			12766	GELKIAYQL	9	67	517.7964320008443	1033.5783110684886	2	517.7980346679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GELKIAYQL_	ENSG00000184432|ENST00000333188|COPB2;nc|ENSG00000184432|P35606-2|COPB2	68.62578634547417	0.14673074753754126	6				NaN	NaN	0	NaN	12844	4111	16956
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16958	42.485	NaN	5782.6	30	0	557.36	0.106	+			11702	FRSRFSRC	8	72	529.7690525509329	1057.5235521686657	2	529.77099609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FRSRFSRC_	ENSG00000130695|ENST00000451429|CEP85;nc|ENSG00000130695|Q6P2H3|CEP85	54.776311868738084	0.5534952410049249	6				NaN	NaN	0	NaN	12845	4111	16956
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16959	42.487	NaN	2339.2	30	0	236.92	0.106			+	17276	IAANKKTQS	9	62	480.77776304983945	959.5409731664789	2	480.77886962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IAANKKTQS_	REV__CCDC150|p.E447Sfs*3|1|0.16|ENSG00000144395|chr2:196676625-196676625|A/-|frameshift_variant;REV__ENSG00000144395|ENST00000389175|CCDC150;REV__ENST00000471546.5_1_2:197504460-197531652:+|nuORF;REV__ENST00000495513.1_1_2:197521477-197537114:+|nuORF	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	12846	4111	16956
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16960	42.488	NaN	2681.1	30	0	282.26	0.106			+	11430	FLTPQTVLKQ	10	75	587.8434437516092	1173.6723345700184	2	587.844970703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FLTPQTVLKQ_	REV__ENST00000448213.2_1_1:81967523-81968357:+|nuORF	37.50817390946774	0.5721060100277453	6				NaN	NaN	0	NaN	12847	4111	16956
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16961	42.49	NaN	2024.6	30	0	172.53	0.106	+			30137	PRVDFWTSTI	10	70	611.3167453405903	1220.6189377479805	2	611.3186645507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_PRVDFWTSTI_	ENSG00000159398|ENST00000290567|CES5A;nc|ENSG00000159398|Q6NT32-2|CES5A;nc|ENSG00000159398|Q6NT32-3|CES5A;nc|ENSG00000159398|Q6NT32-4|CES5A	25.57405402267927	0.6709832231498071	6				NaN	NaN	0	NaN	12848	4111	16956
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16962	42.492	NaN	2476.7	30	0	181.87	0.037	+			7210	DAIRSLASVSY	11	64	591.3098246605088	1180.6050963878174	2	591.311279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DAIRSLASVSY_	ENSG00000107625|ENST00000373585|DDX50	46.45678178249821	0.46959456050452836	6				NaN	NaN	0	NaN	12849	4111	16956
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16972	42.515	NaN	16712	30	0	1819.1	0.214			+	11953	FVKGTSTQIN	10	84	547.7958028692807	1093.5770528053613	2	547.7981567382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FVKGTSTQIN_	REV__ENSG00000136381|ENST00000258886|IREB2	45.97224482568171	0.49411383603842696	6				NaN	NaN	0	NaN	12856	4114	16971
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16973	42.519	NaN	19208	30	0	2811.7	0.106				-1	VCKQMIKR	8	89	539.7967722474234	1077.5789915616467	2	539.798583984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C),Oxidation (M)	_VC(Carbamidomethyl (C))KQM(Oxidation (M))IKR_	ENSG00000090863|ENST00000422840|GLG1;ENST00000561481.1_1_16:74497146-74501752:-|nuORF;ENST00000562090.5_1_16:74487067-74506519:-|nuORF;nc|ENSG00000090863|Q92896-2|GLG1;nc|ENSG00000090863|Q92896-3|GLG1	76.84663266511073	0.3498490246073164	6				NaN	NaN	0	NaN	12857	4114	16971
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16974	42.521	NaN	6892.7	30	0	1302.5	0.106	+			27259	METEENPKVL	10	78	603.2906659221286	1204.566778911057	2	603.2899780273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))ETEENPKVL_	ENSG00000197208|ENST00000200652|SLC22A4	87.69643885390035	0.14426223466775756	6				NaN	NaN	0	NaN	12858	4114	16971
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16975	42.523	NaN	8305.6	30	0	836.62	0.106			+	27042	LYYFTLHL	8	80	535.2903342816389	1068.5661156300778	2	535.2890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LYYFTLHL_	REV__ENSG00000100296|ENST00000490103|THOC5;REV__ENST00000442555.5_1_22:29904448-29924274:-|nuORF	62.97842346883844	0.4722955155785405	6				NaN	NaN	0	NaN	12859	4114	16971
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16976	42.525	NaN	2760.7	30	0	404.29	0.106	+			28060	NAARRRVI	8	57	478.2990973173007	954.5836417014015	2	478.3002014160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NAARRRVI_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	25.450171626174864	0.7628259754767981	6				NaN	NaN	0	NaN	12860	4114	16971
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16977	42.526	NaN	3303.7	30	0	215.24	0.106			+	48151	VSYIRSQTTG	10	65	556.2931155409062	NaN	0	556.2935180664062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VSYIRSQTTG_	REV__ENST00000290158.8_1_17:45755717-45757437:+|nuORF	67.49366992349736	0.17308373824428946	6				NaN	NaN	0	NaN	12861	4114	16971
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16978	42.528	NaN	8096.1	30	0	1081.1	0.038	+			20585	KFWNFVEASQ	10	81	628.3085814718996	1254.6026100105992	2	628.8121337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_KFWNFVEASQ_	ENSG00000136731|ENST00000259253|UGGT1;nc|ENSG00000136731|Q9NYU2-2|UGGT1;UGGT1|p.D546Mfs*27|1|0.03|ENSG00000136731|chr2:128138768-128138769|-/AT|frameshift_variant	65.46538089061403	0.31613324008013116	6				NaN	NaN	0	NaN	12862	4114	16971
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16989	42.552	NaN	8574.6	30	0	1882.8	0.214				-1	LFVFCWCI	8	70	544.2583421789695	1086.502131424739	2	544.2604370117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_LFVFC(Carbamidomethyl (C))WCI_	L1PA6_dup546|chr2:49227587-49231532:-|4.547726375381561|0.2927699401366612|3.96|483.0|226|3|anti-sense	33.49298260027079	0.7007254697536482	6				NaN	NaN	0	NaN	12870	4117	16988
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16990	42.556	NaN	12120	30	0	1087.6	0.106	+			29280	NYIEKVVAI	9	76	524.8044194127629	1047.5942858923256	2	524.8060302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NYIEKVVAI_	ENSG00000136754|ENST00000376140|ABI1;nc|ENSG00000136754|Q8IZP0-10|ABI1;nc|ENSG00000136754|Q8IZP0-11|ABI1;nc|ENSG00000136754|Q8IZP0-12|ABI1;nc|ENSG00000136754|Q8IZP0-2|ABI1;nc|ENSG00000136754|Q8IZP0-3|ABI1;nc|ENSG00000136754|Q8IZP0-4|ABI1;nc|ENSG00000136754|Q8IZP0-5|ABI1;nc|ENSG00000136754|Q8IZP0-6|ABI1;nc|ENSG00000136754|Q8IZP0-7|ABI1;nc|ENSG00000136754|Q8IZP0-8|ABI1;nc|ENSG00000136754|Q8IZP0|ABI1	58.22992032128504	0.22837015374068087	6				NaN	NaN	0	NaN	12871	4117	16988
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16991	42.557	NaN	4623.3	30	0	937.34	0.106			+	3199	ASKKIEGKF	9	48	336.5344378546052	NaN	0	336.5341491699219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ASKKIEGKF_	REV__tr|U7SUA5|U7SUA5_FUSNUOligopeptidaseFOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01160PE=3SV=1	27.882242232435846	0.3367954786602879	6				NaN	NaN	0	NaN	12872	4117	16988
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16992	42.559	NaN	2909.1	30	0	143.26	0.106				-1	 	0	64	391.2238573664646	780.4331617997292	2	391.224853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12873	4117	16988
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16993	42.561	NaN	2989.6	30	0	546.7	0.106			+	-1	MVRQAISM	8	50	484.23871886494334	966.4628847966867	2	484.2401428222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Oxidation (M)	_M(Oxidation (M))VRQAISM(Oxidation (M))_	REV__ENSG00000109805|ENST00000251496|NCAPG;REV__NCAPG|p.G315Efs*4|1|0.05|ENSG00000109805|chr4:17817428-17817429|-/A|frameshift_variant;REV__NCAPG|p.I662Nfs*7|1|0.37|ENSG00000109805|chr4:17834391-17834392|-/A|frameshift_variant;REV__NCAPG|p.L316Nfs*11|1|0.05|ENSG00000109805|chr4:17817429-17817430|-/CA|frameshift_variant	52.29916861842294	0.578018602984656	6				NaN	NaN	0	NaN	12874	4117	16988
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16994	42.563	NaN	3373.4	30	0	207.05	0.037	+			10614	EYMLQNHVF	9	68	590.7746779066694	1179.5348028801386	2	590.7759399414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EYMLQNHVF_	ENSG00000205339|ENST00000379719|IPO7;IPO7|p.M511Cfs*3|1|0.19|ENSG00000205339|chr11:9429134-9429134|A/-|frameshift_variant	94.00642277110589	0.05356993013874309	6				NaN	NaN	0	NaN	12875	4117	16988
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	16995	42.564	NaN	2380.7	30	0	910.27	0.141	+			2104	ALGALPALTF	10	60	487.28923672843075	NaN	0	487.2895202636719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ALGALPALTF_	ENSG00000177595|ENST00000347755|PIDD1;ENST00000524486.5_1_11:803168-803522:-|nuORF;nc|ENSG00000177595|Q9HB75-2|PIDD1;nc|ENSG00000177595|Q9HB75-3|PIDD1	40.5726180659479	0.36520375954238715	6				NaN	NaN	0	NaN	12876	4117	16988
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17004	42.585	NaN	19026	30	0	1872.2	0.214			+	51427	YTYALEKHF	9	88	586.2924428811435	1170.570332829087	2	586.2946166992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YTYALEKHF_	REV__ENSG00000187037|ENST00000334425|GPR141;REV__GPR141|p.F230Lfs*2|2|0.37|ENSG00000187037|chr7:37741078-37741078|T/-|frameshift_variant;REV__GPR141|p.I231Yfs*15|1|0.14|ENSG00000187037|chr7:37741077-37741078|-/T|frameshift_variant	73.97473282117947	0.12360187025703594	6				NaN	NaN	0	NaN	12882	4120	17003
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17005	42.589	NaN	4213	30	0	265.82	0.106	+			17106	HSHKHLIEL	9	71	557.3114565312469	1112.6083601292937	2	557.3132934570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HSHKHLIEL_	CUX2|p.A1430Cfs*11|1|0.26|ENSG00000111249|chr12:111348143-111348144|-/C|frameshift_variant;CUX2|p.I207Nfs*32|1|0.38|ENSG00000111249|chr12:111295387-111295388|-/A|frameshift_variant;CUX2|p.L655Sfs*49|1|0.38|ENSG00000111249|chr12:111312159-111312160|-/T|frameshift_variant;CUX2|p.P1429Lfs*23|1|0.33|ENSG00000111249|chr12:111348144-111348144|C/-|frameshift_variant;ENSG00000111249|ENST00000261726|CUX2	90.77665401227738	0.06267569666681755	6				NaN	NaN	0	NaN	12883	4120	17003
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17006	42.591	NaN	2528.5	30	0	388.14	0.106	+			26003	LSKQLGFF	8	59	470.26721802470854	938.5198831162171	2	470.26849365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSKQLGFF_	ENSG00000161180|ENST00000292779|CCDC116;nc|ENSG00000161180|Q8IYX3-1|CCDC116	65.80317337860623	0.44433089765398776	6				NaN	NaN	0	NaN	12884	4120	17003
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17007	42.593	NaN	3922	30	0	417.82	0.106				-1	MEFITSLLDA	10	70	578.2844895460951	1154.55442615899	2	578.2866821289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_M(Oxidation (M))EFITSLLDA_	ENSG00000198732|ENST00000361956|SMOC1;nc|ENSG00000198732|Q9H4F8|SMOC1	42.396135135203025	0.5270658956260207	6				NaN	NaN	0	NaN	12885	4120	17003
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17008	42.595	NaN	3086.3	30	0	277.09	0.106				-1	ETMASQTNLVD	11	73	612.7749360166489	NaN	0	612.7741088867188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_ETM(Oxidation (M))ASQTNLVD_	ENSG00000010292|ENST00000315579|NCAPD2;NCAPD2|p.F837Sfs*36|1|0.57|ENSG00000010292|chr12:6526307-6526307|C/-|frameshift_variant	53.08895987439943	0.2931326677786871	6				NaN	NaN	0	NaN	12886	4120	17003
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17009	42.596	NaN	1781.3	30	0	161.25	0.106				-1	 	0	48	356.22448549877856	710.4344180643571	2	356.2256164550781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12887	4120	17003
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17010	42.598	NaN	1559	30	0	226.42	0.033	+			29903	PLPLMLLP	8	45	447.2806738237151	892.5467947142303	2	447.28173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_PLPLMLLP_	ENSG00000131721|ENST00000371388|RHOXF2;ENSG00000203989|ENST00000371402|RHOXF2B	33.49298260027079	0.7007254697536482	6				NaN	NaN	0	NaN	12888	4120	17003
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17024	42.627	NaN	22610	30	0	4344.9	0.214	+			47664	VSDHLNLNH	9	87	524.7622798008026	1047.5100066684051	2	524.7639770507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSDHLNLNH_	ENST00000280701.7_1_3:25831614-25832591:+|nuORF	56.72105179125745	0.24094814563026265	6				NaN	NaN	0	NaN	12899	4123	17023
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17025	42.631	NaN	6412.8	30	0	746.98	0.106				-1	FRMSKKMY	8	70	553.7776431267012	1105.5407333202022	2	553.7794799804688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_FRMSKKM(Oxidation (M))Y_	SULF2|p.T206M|1|0.17|ENSG00000196562|chr20:47690246-47690246|G/A|missense_variant	37.15910966729921	0.6739408393984688	6				NaN	NaN	0	NaN	12900	4123	17023
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17026	42.633	NaN	3200.5	30	0	528.3	0.106			+	23655	LARRGREAP	9	63	513.3017960247302	1024.5890391162602	2	513.3026733398438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LARRGREAP_	REV__ENSG00000106003|ENST00000222725|LFNG;REV__nc|ENSG00000106003|Q8NES3-3|LFNG	29.14955571784316	0.5308295550522326	6				NaN	NaN	0	NaN	12901	4123	17023
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17027	42.635	NaN	3142.2	30	0	494.8	0.106	+			22422	KTKRMSLSD	9	67	533.2885923200337	1064.5626317068673	2	534.293701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KTKRMSLSD_	ENSG00000127362|ENST00000247879|TAS2R3	32.81241826257853	0.4965981579233955	6				NaN	NaN	0	NaN	12902	4123	17023
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17028	42.636	NaN	1011.3	30	0	317.41	0.106			+	33503	RKLLLFKTKFI	11	51	703.9660034179688	NaN	0	703.9660034179688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RKLLLFKTKFI_	REV__ENST00000265404.6_1_4:68472071-68472191:+|nuORF	9.182911543092327	0.456735970842152	6				NaN	NaN	0	NaN	12903	4123	17023
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17029	42.638	NaN	1972.3	30	0	266.74	0.033				-1	 	0	54	422.6915709693604	843.3685890055208	2	422.6928405761719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12904	4123	17023
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17030	42.639	NaN	2229.9	30	0	157.28	0.14			+	40755	SVDIVFVVN	9	61	496.2756716225753	990.5367903119507	2	496.2786560058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SVDIVFVVN_	REV__ENSG00000102313|ENST00000218436|ITIH6;REV__ITIH6|p.Q800Rfs*102|1|0.21|ENSG00000102313|chrX:54757676-54757676|G/-|frameshift_variant	42.396135135203025	0.392153681582562	6				NaN	NaN	0	NaN	12905	4123	17023
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17041	42.666	NaN	9457.9	30	0	2618	0.214			+	17047	HQAPSSTSPF	10	71	529.7493776294176	1057.4842023256351	2	529.7510986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HQAPSSTSPF_	REV__ENSG00000229474|ENST00000682850|PATL2;REV__ENST00000560780.1_2_15:44964301-44966556:-|nuORF	45.97224482568171	0.49411383603842696	6				NaN	NaN	0	NaN	12913	4126	17040
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17042	42.67	NaN	4061.1	30	0	479.02	0.106				-1	LAFLLMLYT	9	72	550.8069155036197	1099.5992780740394	2	550.8092041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LAFLLM(Oxidation (M))LYT_	TMEM151B|p.A125T|1|0.28|ENSG00000178233|chr6:44273303-44273303|G/A|missense_variant	31.954861631926434	0.5046124803899898	6				NaN	NaN	0	NaN	12914	4126	17040
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17043	42.672	NaN	5265.9	30	0	453.78	0.106			+	-1	YSKIWLIM	8	71	535.2903342816389	1068.5661156300778	2	536.2990112304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_YSKIWLIM(Oxidation (M))_	REV__ENST00000495810.1_1_7:26236236-26236504:-|nuORF	44.53106598305862	0.628196326904373	6				NaN	NaN	0	NaN	12915	4126	17040
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17044	42.674	NaN	2702.8	30	0	506.38	0.106	+			36625	SGGGHRHL	8	59	410.7123802248755	819.410207516551	2	410.71337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SGGGHRHL_	ENST00000343632.8_1_22:38004484-38004634:+|nuORF	40.5726180659479	0.6527593143185008	6				NaN	NaN	0	NaN	12916	4126	17040
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17045	42.675	NaN	4156.4	30	0	420.4	0.106	+			27961	MVKKGFPH	8	53	472.26250062191605	942.5104483106321	2	472.2637634277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MVKKGFPH_	ENST00000563315.2_2_16:50775163-50775262:-|nuORF	44.53106598305862	0.628196326904373	6				NaN	NaN	0	NaN	12917	4126	17040
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17046	42.677	NaN	1633.2	30	0	594.42	0.106				-1	 	0	46	429.6859378381413	857.3573227430826	2	429.6869812011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12918	4126	17040
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17047	42.679	NaN	1814.2	30	0	174.55	0.034	+			9344	EINPDTGAI	9	59	465.23276380807846	NaN	0	465.2335510253906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_EINPDTGAI_	ENSG00000039068|ENST00000261769|CDH1;ENST00000562836.5_1_16:68797408-68867399:+|nuORF;nc|ENSG00000039068|P12830-2|CDH1	42.396135135203025	0.2590952873412954	6				NaN	NaN	0	NaN	12919	4126	17040
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17060	42.706	NaN	9439.7	30	0	473.99	0.214				-1	 	0	92	369.2108530715185	736.407153209837	2	369.2118225097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12929	4129	17059
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17061	42.71	NaN	8604	30	0	456.4	0.106	+			28450	NFEYPITKF	9	83	579.7951141146546	1157.575675296109	2	579.796630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NFEYPITKF_	tr|U7T3L4|U7T3L4_FUSNUPeptidyl-prolylcis-transisomeraseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00345PE=3SV=1	85.16082228582465	0.07850854922700509	6				NaN	NaN	0	NaN	12930	4129	17059
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17062	42.712	NaN	8332.6	30	0	834.51	0.106				-1	 	0	81	508.79084636268504	1015.5671397921701	2	508.7923278808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12931	4129	17059
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17063	42.714	NaN	1857.8	30	0	170.44	0.106			+	37728	SLTFALPAAL	10	54	502.29369652971474	1002.5728401262295	2	502.2952880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SLTFALPAAL_	REV__ENST00000381103.6_1_5:61602143-61604167:+|nuORF;REV__ENST00000509663.2_1_5:61602143-61811270:+|nuORF	29.14955571784316	0.6417842315402807	6				NaN	NaN	0	NaN	12932	4129	17059
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17064	42.716	NaN	1738.3	30	0	143.28	0.106	+			15808	GVVSKGDK	8	49	395.22760506028266	788.4406571873653	2	395.22906494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GVVSKGDK_	ENSG00000151806|ENST00000281543|GUF1;ENST00000506793.5_1_4:44680541-44700695:+|nuORF;GUF1|p.K645Sfs*2|5|0.23|ENSG00000151806|chr4:44698598-44698598|A/-|frameshift_variant	31.954861631926434	0.7126016770032289	6				NaN	NaN	0	NaN	12933	4129	17059
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17065	42.717	NaN	2107.1	30	0	333.61	0.032			+	-1	CCCDDEHD	8	51	384.7720252602289	NaN	0	384.7721252441406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term),3 Carbamidomethyl (C)	_(Acetyl (Protein N-term))C(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))DDEHD_	REV__ENSG00000198854|ENST00000368775|C1orf68	1.095434079454606	1.7418937515398478	6				NaN	NaN	0	NaN	12934	4129	17059
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17075	42.739	NaN	10766	30	0	1244.1	0.214			+	46138	VDLVWRIL	8	76	507.31116598673657	1012.6077790402732	2	507.3128356933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VDLVWRIL_	REV__ENST00000536896.2_1_1:26145517-26146111:-|nuORF	54.776311868738084	0.5534952410049249	6				NaN	NaN	0	NaN	12941	4132	17074
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17076	42.743	NaN	9777.8	30	0	991.23	0.106				-1	 	0	64	464.29584297095874	926.5771330087175	2	464.2970275878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12942	4132	17074
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17077	42.745	NaN	4601	30	0	694.21	0.106			+	16037	HAVGELQLQA	10	69	533.2885923200337	1064.5626317068673	2	533.29052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_HAVGELQLQA_	REV__ENSG00000185960|ENST00000686671|SHOX	56.632244143249146	0.3964695498866976	6				NaN	NaN	0	NaN	12943	4132	17074
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17078	42.747	NaN	11332	30	0	1589.2	0.106				-1	 	0	64	493.78557073840955	985.5565885436191	2	493.7869873046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12944	4132	17074
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17079	42.748	NaN	6375.9	30	0	789.16	0.106	+			39596	STGVIKLKNN	10	66	537.3198211745236	1072.625089415847	2	537.3216552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_STGVIKLKNN_	ENST00000552596.1_1_12:49952428-49952862:-|nuORF	46.45678178249821	0.4896490706773647	6				NaN	NaN	0	NaN	12945	4132	17074
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17080	42.75	NaN	3601.5	30	0	357.94	0.106	+			50625	YEANYWQF	8	72	560.7387844960407	1119.4630160588813	2	560.7407836914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YEANYWQF_	ENSG00000171864|ENST00000305817|PRND	49.44154591367651	0.597725784090933	6				NaN	NaN	0	NaN	12946	4132	17074
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17081	42.752	NaN	3120.7	30	0	179.08	0.035	+			15878	GYRCIIVM	8	63	514.258388085431	1026.5022232376618	2	514.2601928710938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C),Oxidation (M)	_GYRC(Carbamidomethyl (C))IIVM(Oxidation (M))_	ENSG00000160200|ENST00000398165|CBS;nc|ENSG00000160200|P35520-2|CBS	46.76643321282427	0.6143254112625767	6				NaN	NaN	0	NaN	12947	4132	17074
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17094	42.78	NaN	17383	30	0	4396.1	0.214			+	2137	ALKGWLSSL	9	68	487.7863099328304	973.5580669324609	2	487.78765869140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ALKGWLSSL_	REV__ENSG00000104408|ENST00000220849|EIF3E	53.351449002276354	0.2690372970092375	6				NaN	NaN	0	NaN	12957	4135	17093
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17095	42.784	NaN	19208	30	0	2233.5	0.106	+			21399	KMMYENTTTG	10	82	604.2525737827015	1206.4905946322028	2	604.25439453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Oxidation (M)	_KM(Oxidation (M))M(Oxidation (M))YENTTTG_	ENST00000538600.1_1_12:6631091-6632090:+|nuORF	80.45461616416974	0.1919067876629769	6				NaN	NaN	0	NaN	12958	4135	17093
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17096	42.786	NaN	7505.3	30	0	867.5	0.106				-1	ACKACKKEF	9	71	542.7676077522107	1083.5206625712212	2	542.7695922851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_ACKAC(Carbamidomethyl (C))KKEF_	ENSG00000130856|ENST00000320610|ZNF236;ENST00000583095.1_1_18:74563778-74587448:+|nuORF;nc|ENSG00000130856|Q9UL36-2|ZNF236;nc|ENSG00000130856|Q9UL36|ZNF236;ZNF236|p.D455Efs*8|1|0.18|ENSG00000130856|chr18:76881465-76881466|-/AT|frameshift_variant;ZNF236|p.E1775Sfs*19|1|0.31|ENSG00000130856|chr18:76960761-76960761|G/-|frameshift_variant;ZNF236|p.G1607Rfs*13|1|0.1|ENSG00000130856|chr18:76947552-76947553|-/CT|frameshift_variant;ZNF236|p.Q331Rfs*24|1|0.24|ENSG00000130856|chr18:76880120-76880120|T/-|frameshift_variant	82.30502934623384	0.08758161712619916	6				NaN	NaN	0	NaN	12959	4135	17093
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17097	42.787	NaN	9394	30	0	4016.1	0.106				-1	 	0	69	509.76993899847355	1017.5253250637471	2	509.77142333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12960	4135	17093
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17098	42.789	NaN	8561.4	30	0	838.72	0.106	+			49585	VYFSAIQKI	9	70	534.8067350250288	1067.5989171168576	2	534.8080444335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VYFSAIQKI_	ENSG00000128298|ENST00000381669|BAIAP2L2;nc|ENSG00000128298|Q6UXY1-2|BAIAP2L2	87.69643885390035	0.07135982304947239	6				NaN	NaN	0	NaN	12961	4135	17093
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17099	42.791	NaN	2373.3	30	0	853.92	0.106	+			13434	GLGVWFIK	8	55	460.2737359962377	918.5329190592754	2	460.2750549316406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GLGVWFIK_	ENO4|p.R542W|1|0.3|ENSG00000188316|chr10:116879887-116879887|C/T|missense_variant	20.481830146152948	0.8005983782650069	6				NaN	NaN	0	NaN	12962	4135	17093
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17100	42.793	NaN	2844.1	30	0	488.2	0.034				-1	 	0	56	478.79111681696145	955.5676807007229	2	478.7919616699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12963	4135	17093
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17110	42.816	NaN	4268.7	30	0	827.7	0.214	+			26120	LSPFPTRRGS	10	57	373.20987774270935	NaN	0	373.2098083496094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSPFPTRRGS_	ENST00000565083.1_1_16:88763978-88764554:-|nuORF	35.61828744233558	0.3832230071539346	6				NaN	NaN	0	NaN	12970	4138	17109
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17111	42.82	NaN	3570.6	30	0	231.84	0.106			+	51445	YVEDQLAPHQ	10	77	600.2884634817542	1198.5623740303083	2	600.2899780273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YVEDQLAPHQ_	REV__ENSG00000169994|ENST00000409816|MYO7B;REV__ENST00000496841.5_1_2:128377972-128392002:+|nuORF;REV__nc|ENSG00000169994|Q6PIF6-2|MYO7B;REV__nc|ENSG00000169994|Q6PIF6|MYO7B	40.77816245573522	0.5419747034533848	6				NaN	NaN	0	NaN	12971	4138	17109
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17112	42.822	NaN	8461.2	30	0	845.59	0.106			+	41610	SVQKAQNKF	9	75	525.2908512064915	1048.567149479783	2	525.2926025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVQKAQNKF_	REV__ENST00000507812.5_1_5:49961757-49961832:+|nuORF	71.87747018426188	0.13267044672804276	6				NaN	NaN	0	NaN	12972	4138	17109
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17113	42.824	NaN	3475.4	30	0	518.94	0.106	+			27273	MFLIRPHS	8	62	500.77479284717793	999.5350327611559	2	500.77655029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MFLIRPHS_	ENST00000412804.1_1_3:4532917-4534539:-|nuORF	38.80614096846853	0.6637206697844082	6				NaN	NaN	0	NaN	12973	4138	17109
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17114	42.825	NaN	2558.8	30	0	238.6	0.106	+			18037	IIPPADHPSGY	11	72	583.7955624271027	1165.5765719210053	2	583.797119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_IIPPADHPSGY_	ENSG00000131196|ENST00000427363|NFATC1;nc|ENSG00000131196|O95644-10|NFATC1;nc|ENSG00000131196|O95644-11|NFATC1;nc|ENSG00000131196|O95644-2|NFATC1;nc|ENSG00000131196|O95644-3|NFATC1;nc|ENSG00000131196|O95644-4|NFATC1;nc|ENSG00000131196|O95644-5|NFATC1;nc|ENSG00000131196|O95644-6|NFATC1;nc|ENSG00000131196|O95644-8|NFATC1	35.61828744233558	0.616184410043185	6				NaN	NaN	0	NaN	12974	4138	17109
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17115	42.827	NaN	2199.1	30	0	213.79	0.106	+			50643	YEDFNIQL	8	73	521.2462579230264	1040.4779629128527	2	521.248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YEDFNIQL_	ENSG00000215182|ENST00000621226|MUC5AC;MUC5AC|p.L324Cfs*137|1|0.3|ENSG00000215182|chr11:1164280-1164280|G/-|frameshift_variant;MUC5AC|p.R4729Efs*5|1|0.24|ENSG00000215182|chr11:1192325-1192325|C/-|frameshift_variant	51.33545320467046	0.5859736979383976	6				NaN	NaN	0	NaN	12975	4138	17109
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17116	42.829	NaN	1725.3	30	0	132.13	0.037				-1	YVSKDTPMLL	10	70	591.8097242003098	1181.6048954674195	2	591.8118286132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_YVSKDTPM(Oxidation (M))LL_	ENSG00000172409|ENST00000533682|CLP1;nc|ENSG00000172409|Q92989-2|CLP1	49.536043120802724	0.461275219792494	6				NaN	NaN	0	NaN	12976	4138	17109
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17122	42.844	NaN	2224.9	30	0	339.24	0.214	+			19816	KEDGAISTIVL	11	65	573.3225138697571	1144.6304748063142	2	573.3245239257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KEDGAISTIVL_	ENSG00000156261|ENST00000286788|CCT8;nc|ENSG00000156261|P50990-2|CCT8;nc|ENSG00000156261|P50990-3|CCT8	47.227680397652996	0.4590463137409202	6				NaN	NaN	0	NaN	12979	4141	17121
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17123	42.847	NaN	3022.8	30	0	373.87	0.106	+			29752	PHRSYVSTM	9	72	547.2586970522676	1092.5028411713351	2	547.2609252929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_PHRSYVSTM(Oxidation (M))_	ENSG00000140525|ENST00000310775|FANCI;nc|ENSG00000140525|Q9NVI1-1|FANCI;nc|ENSG00000140525|Q9NVI1-2|FANCI	51.33545320467046	0.2872990594074956	6				NaN	NaN	0	NaN	12980	4141	17121
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17124	42.849	NaN	4169.4	30	0	608.64	0.106				-1	TVAAMSSITF	10	74	522.2608753908764	NaN	0	522.2607421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_TVAAM(Oxidation (M))SSITF_	ENSG00000148110|ENST00000375344|MFSD14B	51.33545320467046	0.297159550775418	6				NaN	NaN	0	NaN	12981	4141	17121
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17125	42.851	NaN	3151.4	30	0	653.37	0.106	+			43174	TETNVYFKL	9	71	557.7905627288501	1113.5665725245	2	557.7915649414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TETNVYFKL_	ENSG00000130810|ENST00000253107|PPAN;nc|ENSG00000130810|Q9NQ55-2|PPAN;nc|ENSG00000130810|Q9NQ55-3|PPAN	60.11826168202944	0.21262886028301267	6				NaN	NaN	0	NaN	12982	4141	17121
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17126	42.853	NaN	2485	30	0	205.54	0.106				-1	ENLLEERNC	9	69	588.7730367759739	NaN	0	588.7734985351562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_ENLLEERNC(Carbamidomethyl (C))_	ENSG00000149090|ENST00000619888|PAMR1;nc|ENSG00000149090|Q6UXH9-3|PAMR1;PAMR1|p.R270H|1|0.17|ENSG00000149090|chr11:35468012-35468012|C/T|missense_variant;PAMR1|p.V621Gfs*11|1|0.43|ENSG00000149090|chr11:35432657-35432658|-/C|frameshift_variant	34.172542307311794	0.30503706118289736	6				NaN	NaN	0	NaN	12983	4141	17121
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17127	42.855	NaN	1018.4	30	0	68.523	0.106	+			24470	LGGGGRLA	8	43	350.7087097167969	NaN	0	350.7087097167969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LGGGGRLA_	ENSG00000148400|ENST00000651671|NOTCH1;NOTCH1|p.Q2403Sfs*19|1|0.51|ENSG00000148400|chr9:136496532-136496532|G/-|frameshift_variant;REV__ENSG00000129559|ENST00000250495|NEDD8;REV__ENST00000441775.1_1_1:84710041-84710257:+|nuORF;REV__ENST00000527046.5_1_14:24686335-24700866:-|nuORF;REV__ENST00000560427.1_1_14:24686335-24687646:-|nuORF	14.664097394203935	1.7418937515398478	6				NaN	NaN	0	NaN	12984	4141	17121
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17128	42.856	NaN	1751.6	30	0	158.26	0.035	+			28474	NFVTPLTSL	9	60	496.2756716225753	990.5367903119507	2	496.2769470214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NFVTPLTSL_	ENSG00000102313|ENST00000218436|ITIH6;ITIH6|p.Q800Rfs*102|1|0.21|ENSG00000102313|chrX:54757676-54757676|G/-|frameshift_variant	29.170058357718403	0.5306379469863586	6				NaN	NaN	0	NaN	12985	4141	17121
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17135	42.873	NaN	15131	30	0	3171.9	0.214			+	26196	LSRVSGRKY	9	70	533.3117614141364	1064.6089698950727	2	533.3136596679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LSRVSGRKY_	REV__ENSG00000277363|ENST00000617146|SRCIN1;REV__nc|ENSG00000277363|Q9C0H9-2|SRCIN1;REV__SRCIN1|p.K846Rfs*3|1|0.3|ENSG00000277363|chr17:38552078-38552078|G/-|frameshift_variant;REV__SRCIN1|p.P868Rfs*2|1|0.47|ENSG00000277363|chr17:38552010-38552010|G/-|frameshift_variant;REV__SRCIN1|p.S866Afs*4|3|0.35|ENSG00000277363|chr17:38552018-38552018|G/-|frameshift_variant	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	12989	4144	17134
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17136	42.876	NaN	2840.3	30	0	179.19	0.106	+			17837	IFKAELNEF	9	68	555.793832446772	1109.5731119603438	2	555.7955932617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IFKAELNEF_	ENSG00000149273|ENST00000531188|RPS3;ENST00000529173.5_1_11:75110591-75112804:+|nuORF;nc|ENSG00000149273|P23396-2|RPS3	66.96192283764107	0.15557981141143568	6				NaN	NaN	0	NaN	12990	4144	17134
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17137	42.878	NaN	3150.1	30	0	270.57	0.106	+			24248	LETLGLAQSL	10	67	522.7995685820935	1043.5845842309868	2	522.8007202148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LETLGLAQSL_	ENST00000538502.5_2_1:109883387-109884641:-|nuORF	47.95952297671804	0.47580206326914537	6				NaN	NaN	0	NaN	12991	4144	17134
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17138	42.88	NaN	2329.6	30	0	135.88	0.106	+			3057	ASFLLIASK	9	64	475.28891572634706	NaN	0	475.2889709472656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ASFLLIASK_	DDX60L|p.N1642Mfs*9|1|0.2|ENSG00000181381|chr4:168371615-168371615|T/-|frameshift_variant;ENSG00000181381|ENST00000682922|DDX60L	96.0336014099291	0.029433397039169355	6				NaN	NaN	0	NaN	12992	4144	17134
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17139	42.882	NaN	1584.1	30	0	118.86	0.106	+			16737	HLNPMQLM	8	61	500.2417615796933	998.4689702261866	2	500.2427062988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_HLNPMQLM(Oxidation (M))_	ENSG00000136715|ENST00000643581|SAP130;nc|ENSG00000136715|Q9H0E3-2|SAP130;nc|ENSG00000136715|Q9H0E3-3|SAP130;nc|ENSG00000136715|Q9H0E3|SAP130;SAP130|p.R833Kfs*17|1|0.38|ENSG00000136715|chr2:127950308-127950309|-/G|frameshift_variant	44.53106598305862	0.628196326904373	6				NaN	NaN	0	NaN	12993	4144	17134
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17140	42.884	NaN	1150.1	30	0	127.1	0.031				-1	 	0	37	347.1977423791496	692.3809318250992	2	347.1983642578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	12994	4144	17134
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17147	42.9	NaN	10313	30	0	845.33	0.214	+			14797	GTLDSVLRY	9	70	512.2776726113677	NaN	0	512.2765502929688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTLDSVLRY_	ENSG00000142207|ENST00000382751|URB1	58.22992032128504	0.15686832049467786	6				NaN	NaN	0	NaN	12998	4147	17146
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17148	42.904	NaN	2963.3	30	0	272.71	0.106			+	26145	LSQFVPISV	9	60	495.28569749216877	988.5568420511376	2	495.2866516113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSQFVPISV_	REV__EDEM2|p.M309I|1|0.25|ENSG00000088298|chr20:35126293-35126293|C/T|missense_variant	80.45461616416974	0.09558281504443908	6				NaN	NaN	0	NaN	12999	4147	17146
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17149	42.906	NaN	3493.6	30	0	132.27	0.106				-1	 	0	70	391.2238573664646	780.4331617997292	2	391.22479248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13000	4147	17146
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17150	42.908	NaN	5342.4	30	0	1353.2	0.106	+			33341	RHAALQVRG	9	51	336.5344378546052	NaN	0	336.53424072265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RHAALQVRG_	ENST00000562416.1_1_16:69788588-69788813:-|nuORF	37.15910966729921	0.2899585034171616	6				NaN	NaN	0	NaN	13001	4147	17146
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17151	42.909	NaN	3245.1	30	0	430.25	0.106			+	28010	MWFGFACLL	9	70	544.2583421789695	1086.502131424739	2	544.2606201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MWFGFACLL_	REV__ENSG00000167098|ENST00000356173|SUN5;REV__SUN5|p.E154Gfs*8|1|0.26|ENSG00000167098|chr20:32995692-32995693|-/C|frameshift_variant	39.021493756699265	0.43173687394350213	6				NaN	NaN	0	NaN	13002	4147	17146
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17152	42.911	NaN	3917.2	30	0	546.63	0.106	+			51507	YVQHWIDL	8	70	537.2739771582515	1072.5334013833028	2	537.2756958007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YVQHWIDL_	DNHD1|p.S3597Rfs*6|1|0.1|ENSG00000179532|chr11:6565718-6565719|-/AG|frameshift_variant;DNHD1|p.T4259Pfs*33|2|0.33|ENSG00000179532|chr11:6568772-6568772|C/-|frameshift_variant;ENSG00000179532|ENST00000254579|DNHD1	53.351449002276354	0.5676011784961348	6				NaN	NaN	0	NaN	13003	4147	17146
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17153	42.913	NaN	2537.7	30	0	584.67	0.033	+			24142	LELALKSL	8	56	443.78259521708367	885.5506375009674	2	443.7837829589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LELALKSL_	REV__HERVH-int_dup3527|chrX:4542813-4545870:-|8.094520876636611|0.0139942278604804|9.18|476.0|78|1|anti-sense;tr|U7SV01|U7SV01_FUSNUWGRdomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01456PE=4SV=1	53.351449002276354	0.5676011784961348	6				NaN	NaN	0	NaN	13004	4147	17146
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17163	42.935	NaN	4704.7	30	0	642.37	0.214	+			15883	GYSEHFVEF	9	76	557.7445836997175	1113.474614466235	2	557.7457885742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GYSEHFVEF_	ENSG00000100938|ENST00000399440|GMPR2;ENSG00000137198|ENST00000259727|GMPR;ENST00000559287.5_1_14:24702733-24706289:+|nuORF;ENST00000559606.1_1_14:24704927-24706289:+|nuORF;GMPR|p.V142M|1|0.39|ENSG00000137198|chr6:16254694-16254694|G/A|missense_variant;nc|ENSG00000100938|Q9P2T1-2|GMPR2;nc|ENSG00000100938|Q9P2T1-3|GMPR2	53.351449002276354	0.2690372970092375	6				NaN	NaN	0	NaN	13011	4150	17162
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17164	42.938	NaN	1602.5	30	0	161.94	0.035	+			41730	SVSFSATGKL	10	55	498.7713317871094	NaN	0	498.7713317871094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVSFSATGKL_	EML5|p.G1621Efs*19|1|0.2|ENSG00000165521|chr14:88624982-88624982|C/-|frameshift_variant;EML5|p.N1682Mfs*7|1|0.04|ENSG00000165521|chr14:88621246-88621246|T/-|frameshift_variant;ENSG00000165521|ENST00000554922|EML5;ENST00000553281.5_1_14:89088194-89171927:-|nuORF;nc|ENSG00000165521|Q05BV3|EML5	43.650786325866115	0.3457431322078509	6				NaN	NaN	0	NaN	13012	4150	17162
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17172	42.958	NaN	1730.6	30	0	135.56	0.214			+	49790	VYSGQKDLF	9	64	528.7700545013602	1055.5255560695202	2	528.7720947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYSGQKDLF_	REV__EPS15L1|p.F73S|1|0.47|ENSG00000127527|chr19:16437861-16437861|A/G|missense_variant	47.657333605630114	0.33044192980041115	6				NaN	NaN	0	NaN	13017	4153	17171
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17173	42.962	NaN	1672.7	30	0	197.58	0.035	+			37698	SLSLSPGTHL	10	54	506.2774657068627	1010.5403784805254	2	506.2794189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLSLSPGTHL_	ENSG00000161996|ENST00000293879|WDR90;ENST00000547407.5_1_16:712941-717586:+|nuORF;ENST00000549024.5_1_16:711101-717586:+|nuORF;ENST00000553080.1_1_16:716564-717586:+|nuORF;nc|ENSG00000161996|Q96KV7-7|WDR90	31.529811441608018	0.6223461015008678	6				NaN	NaN	0	NaN	13018	4153	17171
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17185	42.987	NaN	3348.5	30	0	372.33	0.214			+	21878	KRNRLVSL	8	69	493.31704097425853	984.6195290153171	2	493.3182067871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KRNRLVSL_	REV__ENSG00000134640|ENST00000257068|MTNR1B	45.9519527083369	0.6193794311207887	6				NaN	NaN	0	NaN	13027	4156	17184
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17186	42.991	NaN	3901.3	30	0	471.99	0.106	+			49641	VYIHPSSALF	10	80	567.3016452364183	1132.5887375396364	2	567.3028564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYIHPSSALF_	ENSG00000067596|ENST00000262415|DHX8	72.87924865735499	0.25379688738724415	6				NaN	NaN	0	NaN	13028	4156	17184
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17187	42.993	NaN	4428.3	30	0	900.3	0.106				-1	 	0	67	482.2959241393421	962.5772953454842	2	482.2972106933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13029	4156	17184
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17188	42.995	NaN	3288.4	30	0	677.79	0.106				-1	 	0	60	422.6915709693604	843.3685890055208	2	422.69244384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13030	4156	17184
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17189	42.997	NaN	3716.3	30	0	638.6	0.106			+	-1	YQFSILLKM	9	63	579.8149152733522	1157.6152776135043	2	579.8164672851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_YQFSILLKM(Oxidation (M))_	REV__nc|ENSG00000277880|A0A087X0K7|TRBV17	40.05817265558897	0.419577045485086	6				NaN	NaN	0	NaN	13031	4156	17184
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17190	42.998	NaN	4483.7	30	0	578.72	0.106			+	-1	MKIKISNQM	9	69	554.7952404045766	1107.575927875953	2	554.796142578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_MKIKISNQM(Oxidation (M))_	REV__ENST00000485726.1_1_7:103828364-103848439:-|nuORF	66.42927471994793	0.16001998865088202	6				NaN	NaN	0	NaN	13032	4156	17184
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17191	43	NaN	3310.2	30	0	152.87	0.037	+			36551	SFLSVLETGGL	11	72	561.8041718873394	1121.5937908414787	2	561.80615234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_SFLSVLETGGL_	ENST00000258412.7_1_2:219140006-219140096:-|nuORF	85.16082228582465	0.11858485847190207	6				NaN	NaN	0	NaN	13033	4156	17184
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17204	43.028	NaN	6847.5	30	0	808.21	0.214	+			23365	KYVSSVLSF	9	72	515.2845370258754	NaN	0	515.2844848632812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KYVSSVLSF_	ENSG00000198862|ENST00000361371|LTN1;nc|ENSG00000198862|O94822-3|LTN1	96.0336014099291	0.029433397039169355	6				NaN	NaN	0	NaN	13043	4159	17203
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17205	43.032	NaN	12578	30	0	4038	0.106				-1	 	0	74	645.8537528845992	1289.6929528359983	2	645.8556518554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13044	4159	17203
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17206	43.034	NaN	10137	30	0	2639.8	0.106				-1	 	0	64	449.30888267830215	896.6032124234043	2	449.3099365234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13045	4159	17203
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17207	43.036	NaN	5995.6	30	0	1507.1	0.106				-1	 	0	64	410.7123802248755	819.410207516551	2	410.7134094238281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13046	4159	17203
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17208	43.037	NaN	4631	30	0	296.75	0.106	+			45597	TYPAELNNI	9	67	517.7597809391935	1033.505008945187	2	517.7611694335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TYPAELNNI_	ENSG00000106546|ENST00000242057|AHR	79.71258880314673	0.09879134589249085	6				NaN	NaN	0	NaN	13047	4159	17203
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17209	43.039	NaN	7215.2	30	0	1872.5	0.106				-1	 	0	58	462.76163675530375	923.5087205774075	2	462.7628173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13048	4159	17203
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17210	43.041	NaN	3732.5	30	0	346.38	0.036	+			24457	LGFLWPLLT	9	68	530.3135981003587	1058.6126432675173	2	530.315673828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_LGFLWPLLT_	ENSG00000197405|ENST00000355085|C5AR1	68.484700416344	0.1473408039581241	6				NaN	NaN	0	NaN	13049	4159	17203
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17227	43.076	NaN	28702	30	0	3269	0.215	+			13488	GLLRGFRR	8	75	487.8038132440457	973.5930735548915	2	487.80499267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GLLRGFRR_	ENSG00000125458|ENST00000245552|NT5C;ENST00000579023.5_1_17:73127274-73127802:-|nuORF;ENST00000583655.5_1_17:73127559-73127802:-|nuORF;nc|ENSG00000125458|Q8TCD5-2|NT5C	65.80317337860623	0.44433089765398776	6				NaN	NaN	0	NaN	13063	4162	17226
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17228	43.08	NaN	10015	30	0	502.93	0.106				-1	 	0	86	369.2108530715185	736.407153209837	2	369.21185302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13064	4162	17226
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17229	43.082	NaN	5333.1	30	0	730.11	0.106	+			1020	AEKLGFAGL	9	65	453.25647263727257	904.4983923413452	2	453.25799560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AEKLGFAGL_	ENSG00000150753|ENST00000280326|CCT5;ENST00000423695.6_1_5:10250480-10261980:+|nuORF;nc|ENSG00000150753|P48643-2|CCT5	82.7504851949679	0.08565546331141553	6				NaN	NaN	0	NaN	13065	4162	17226
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17230	43.083	NaN	2309.6	30	0	230.14	0.106	+			31837	QPSPAPTPTV	10	60	497.76237959921934	993.5102062652387	2	498.26531982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QPSPAPTPTV_	BACH2|p.A322V|1|0.32|ENSG00000112182|chr6:89951141-89951141|G/A|missense_variant	52.936696900407355	0.4300801048568001	6				NaN	NaN	0	NaN	13066	4162	17226
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17231	43.085	NaN	2130.4	30	0	208.44	0.106	+			45509	TYFEKNFNL	9	72	588.2909545898438	NaN	0	588.2909545898438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TYFEKNFNL_	ENSG00000107099|ENST00000432829|DOCK8;nc|ENSG00000107099|Q8NF50-2|DOCK8;nc|ENSG00000107099|Q8NF50-3|DOCK8;nc|ENSG00000107099|Q8NF50-4|DOCK8	47.657333605630114	0.2228375344433429	6				NaN	NaN	0	NaN	13067	4162	17226
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17232	43.087	NaN	2798.1	30	0	215.73	0.036			+	-1	SFQMFMGKL	9	79	560.7621629071714	1119.5097728811427	2	560.7653198242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Oxidation (M)	_SFQM(Oxidation (M))FM(Oxidation (M))GKL_	REV__ENSG00000170615|ENST00000306312|SLC26A5;REV__nc|ENSG00000170615|P58743-2|SLC26A5;REV__nc|ENSG00000170615|P58743-3|SLC26A5;REV__SLC26A5|p.F693Lfs*19|1|0.36|ENSG00000170615|chr7:103374555-103374555|A/-|frameshift_variant;REV__SLC26A5|p.I619Nfs*9|2|0.3|ENSG00000170615|chr7:103377731-103377732|-/G|frameshift_variant	27.882242232435846	0.5426732730940306	6				NaN	NaN	0	NaN	13068	4162	17226
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17244	43.113	NaN	4455.5	30	0	508.87	0.214	+			10860	FATTNQISL	9	62	497.76237959921934	993.5102062652387	2	497.76336669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FATTNQISL_	ENSG00000149600|ENST00000278980|COMMD7;ENST00000610160.1_1_20:31291624-31315937:-|nuORF;nc|ENSG00000149600|Q86VX2-2|COMMD7	89.02883481214508	0.06760336634167786	6				NaN	NaN	0	NaN	13077	4165	17243
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17245	43.116	NaN	2249.4	30	0	295.16	0.106				-1	PMCVRVSI	8	62	481.2531242145251	960.4916954958502	2	481.2544250488281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_PMC(Carbamidomethyl (C))VRVSI_	ENST00000356232.8_1_3:132378699-132378999:+|nuORF	50.0245360154114	0.5941082100236891	6				NaN	NaN	0	NaN	13078	4165	17243
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17246	43.118	NaN	5745.6	30	0	599.11	0.106			+	19502	KATRGLFEGTT	11	76	590.8201118439606	1179.625670754721	2	591.3236083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KATRGLFEGTT_	REV__ATP1B3|p.K221Nfs*26|1|0.39|ENSG00000069849|chr3:141922052-141922052|A/-|frameshift_variant;REV__ATP1B3|p.Q63Wfs*7|1|0.04|ENSG00000069849|chr3:141903696-141903697|-/TGGC|frameshift_variant;REV__ENSG00000069849|ENST00000286371|ATP1B3	53.08895987439943	0.38514566451266113	6				NaN	NaN	0	NaN	13079	4165	17243
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17247	43.12	NaN	1369	30	0	125.44	0.106				-1	 	0	50	356.22454835066736	710.4345437681347	2	356.225830078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13080	4165	17243
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17248	43.122	NaN	2683	30	0	242.25	0.106			+	27499	MMLKREKA	8	63	503.779460704436	1005.5443684756721	2	503.7818298339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MMLKREKA_	REV__ENSG00000198838|ENST00000634891|RYR3;REV__nc|ENSG00000198838|Q15413-2|RYR3;REV__nc|ENSG00000198838|Q15413-3|RYR3;REV__RYR3|p.E2211Qfs*84|1|0.14|ENSG00000198838|chr15:33722725-33722726|-/CA|frameshift_variant;REV__RYR3|p.E3943Rfs*18|1|0.12|ENSG00000198838|chr15:33837800-33837801|-/A|frameshift_variant;REV__RYR3|p.G2237Efs*57|1|0.42|ENSG00000198838|chr15:33722800-33722800|G/-|frameshift_variant;REV__RYR3|p.N4580Mfs*8|1|0.37|ENSG00000198838|chr15:33853618-33853618|A/-|frameshift_variant	44.116797842482775	0.6307669463330267	6				NaN	NaN	0	NaN	13081	4165	17243
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17249	43.124	NaN	2801.5	30	0	146.84	0.106			+	11472	FNQPHYPSI	9	70	551.7694377332671	NaN	0	551.7698364257812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FNQPHYPSI_	REV__HERVH-int_dup4763|chr13:43060101-43060646:-|1.1455265893349995|0.1694828300693424|2.76|471.0|18|3|sense	49.44154591367651	0.21054156626303966	6				NaN	NaN	0	NaN	13082	4165	17243
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17250	43.125	NaN	3493.9	30	0	401.09	0.037	+			51248	YQLELRTTL	9	72	568.8170367881447	1135.6195206430893	2	568.8180541992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YQLELRTTL_	nc|ENSG00000179344|P01920|HLA-DQB1	58.2462437865262	0.22823408064396822	6				NaN	NaN	0	NaN	13083	4165	17243
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17263	43.153	NaN	3419.7	30	0	597.56	0.214				-1	EGCVRKQLK	9	47	373.20987774270935	NaN	0	373.2097473144531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_EGC(Carbamidomethyl (C))VRKQLK_	OASL|p.D290G|1|0.07|ENSG00000135114|chr12:121027606-121027606|T/C|missense_variant	31.529811441608018	0.3183796599642538	6				NaN	NaN	0	NaN	13093	4168	17262
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17264	43.156	NaN	3563.7	30	0	508.24	0.106			+	-1	HSNLSINECVA	11	69	643.2956973376996	1284.5768417421991	2	643.2978515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))HSNLSINEC(Carbamidomethyl (C))VA_	REV__nc|ENSG00000142166|P17181-2|IFNAR1	51.19269402634007	0.4047928213175833	6				NaN	NaN	0	NaN	13094	4168	17262
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17265	43.158	NaN	4640.8	30	0	342.9	0.106	+			6819	CHDCLVKYL	9	68	575.7730713497681	1149.531589766336	2	575.7745971679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_C(Carbamidomethyl (C))HDCLVKYL_	ENSG00000189051|ENST00000399398|RNF222	71.29570347882199	0.13518600952103718	6				NaN	NaN	0	NaN	13095	4168	17262
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17266	43.16	NaN	1861.9	30	0	143.42	0.106			+	40834	SVELIKLIK	9	65	521.8466796875	NaN	0	521.8466796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SVELIKLIK_	REV__ENST00000483493.6_1_9:26884817-26892259:-|nuORF	20.94693142431847	0.3660861156085067	6				NaN	NaN	0	NaN	13096	4168	17262
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17267	43.162	NaN	1708	30	0	83.84	0.106			+	51531	YVYVPDGKK	9	67	534.7881811180764	1067.5618093029527	2	534.789306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YVYVPDGKK_	REV__ENSG00000154305|ENST00000344922|MIA3;REV__ENST00000470521.1_1_1:222791452-222819114:+|nuORF;REV__MIA3|p.E729Nfs*3|1|0.09|ENSG00000154305|chr1:222629403-222629403|A/-|frameshift_variant;REV__MIA3|p.H496Vfs*10|1|0.04|ENSG00000154305|chr1:222628705-222628706|-/GTTTCCC|frameshift_variant;REV__MIA3|p.M993Nfs*3|1|0.25|ENSG00000154305|chr1:222630191-222630192|-/A|frameshift_variant;REV__MIA3|p.N168Kfs*3|1|0.27|ENSG00000154305|chr1:222627716-222627717|-/A|frameshift_variant;REV__MIA3|p.N746Kfs*10|1|0.35|ENSG00000154305|chr1:222629450-222629451|-/A|frameshift_variant;REV__MIA3|p.P1645Yfs*19|1|0.06|ENSG00000154305|chr1:222659963-222659964|-/TATAG|frameshift_variant;REV__MIA3|p.V974Sfs*4|1|0.36|ENSG00000154305|chr1:222630134-222630135|-/A|frameshift_variant;REV__nc|ENSG00000154305|Q5JRA6-2|MIA3;REV__nc|ENSG00000154305|Q5JRA6-3|MIA3	37.15910966729921	0.4535818937225704	6				NaN	NaN	0	NaN	13097	4168	17262
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17268	43.164	NaN	1245.3	30	0	116.16	0.034	+			29736	PHPRPAQL	8	49	458.2607100377372	NaN	0	458.2606506347656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PHPRPAQL_	ENST00000521249.1_1_14:102695383-102695488:-|nuORF	54.76467175910256	1.7418937515398478	6				NaN	NaN	0	NaN	13098	4168	17262
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17269	43.164	NaN	1227.8	30	0	206.52	0.139			+	-1	LSQDQIQM	8	56	489.7303047355883	977.4460565379766	2	490.23248291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_LSQDQIQM(Oxidation (M))_	REV__ENSG00000215595|ENST00000400633|C20orf202	35.61828744233558	0.6843154725607303	6				NaN	NaN	0	NaN	13099	4168	17262
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17276	43.183	NaN	5258.5	30	0	718.47	0.214	+			32892	RDPAQGCVTF	10	70	547.2586970522676	1092.5028411713351	2	547.2611083984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RDPAQGCVTF_	ENSG00000180884|ENST00000404801|ZNF792	36.446750945000026	0.5818864909973037	6				NaN	NaN	0	NaN	13103	4171	17275
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17277	43.186	NaN	3017.8	30	0	725.87	0.106	+			32688	RAGGRRVI	8	52	442.7805502742862	883.5465476153724	2	442.781982421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RAGGRRVI_	ENST00000260402.7_1_15:40600014-40600113:-|nuORF	42.47446043378293	0.6409579893742323	6				NaN	NaN	0	NaN	13104	4171	17275
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17278	43.188	NaN	2674.8	30	0	283.62	0.106			+	51452	YVFGRCSF	8	56	489.7303047355883	977.4460565379766	2	489.7314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YVFGRCSF_	REV__ENST00000383052.5_1_Y:2847091-2847145:+|nuORF	68.484700416344	0.4195245774506064	6				NaN	NaN	0	NaN	13105	4171	17275
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17279	43.19	NaN	2088	30	0	151.02	0.106	+			18397	IRNLDENYY	9	67	600.2884634817542	1198.5623740303083	2	600.2906494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IRNLDENYY_	COL5A1|p.D1172Tfs*104|1|0.22|ENSG00000130635|chr9:134810290-134810290|G/-|frameshift_variant;COL5A1|p.D418N|1|0.28|ENSG00000130635|chr9:134731583-134731583|G/A|missense_variant;COL5A1|p.G1351Efs*137|2|0.4|ENSG00000130635|chr9:134815605-134815605|C/-|frameshift_variant;COL5A1|p.G997Afs*77|1|0.22|ENSG00000130635|chr9:134801983-134801983|C/-|frameshift_variant;COL5A1|p.G997Rfs*17|1|0.4|ENSG00000130635|chr9:134801982-134801983|-/C|frameshift_variant;COL5A1|p.K933Rfs*141|1|0.32|ENSG00000130635|chr9:134795309-134795309|C/-|frameshift_variant;COL5A1|p.P1302Rfs*186|1|0.05|ENSG00000130635|chr9:134814030-134814030|C/-|frameshift_variant;COL5A1|p.P1388Lfs*100|1|0.55|ENSG00000130635|chr9:134817061-134817061|G/-|frameshift_variant;COL5A1|p.P870Qfs*204|1|0.5|ENSG00000130635|chr9:134786009-134786009|C/-|frameshift_variant;COL5A1|p.P966Lfs*108|1|0.41|ENSG00000130635|chr9:134796895-134796895|C/-|frameshift_variant;ENSG00000130635|ENST00000371817|COL5A1;nc|ENSG00000130635|P20908-2|COL5A1	31.529811441608018	0.5085848003137583	6				NaN	NaN	0	NaN	13106	4171	17275
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17280	43.192	NaN	1722.4	30	0	239.61	0.106			+	31121	QFVSRVSNF	9	66	542.2836303710938	NaN	0	542.2836303710938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_QFVSRVSNF_	REV__ENSG00000137965|ENST00000370747|IFI44;REV__ENST00000467790.5_1_1:79115880-79120915:+|nuORF;REV__ENST00000495254.5_1_1:79119932-79128426:+|nuORF	45.97224482568171	0.23445038899310136	6				NaN	NaN	0	NaN	13107	4171	17275
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17281	43.194	NaN	1981	30	0	348.66	0.106	+			10953	FDVTGPHAPI	10	53	527.2699093784242	1052.5252658236484	2	527.7724609375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FDVTGPHAPI_	nc|ENSG00000215811|A8MVZ5|BTNL10P	35.61828744233558	0.588957954432594	6				NaN	NaN	0	NaN	13108	4171	17275
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17282	43.195	NaN	2358.1	30	0	540.05	0.038				-1	TVIRNICFGN	10	71	597.3085513420996	1192.602549750999	2	597.3099975585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_TVIRNIC(Carbamidomethyl (C))FGN_	COPS2|p.G191Rfs*21|1|0.11|ENSG00000166200|chr15:49134484-49134485|-/T|frameshift_variant	32.81241826257853	0.6118718159329168	6				NaN	NaN	0	NaN	13109	4171	17275
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17290	43.215	NaN	8314.5	30	0	746.78	0.214				-1	NILNILGNGM	10	72	537.7834933983632	1073.5524338635264	2	537.7850952148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_NILNILGNGM(Oxidation (M))_	tr|U7T2T6|U7T2T6_FUSNUMATEfamilymultidrugresistanceproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00453PE=4SV=1	34.172542307311794	0.6007644933930345	6				NaN	NaN	0	NaN	13114	4174	17289
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17291	43.219	NaN	1707.6	30	0	381.93	0.106			+	-1	CCCDDEHD	8	48	384.7720003815535	NaN	0	384.7718505859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term),3 Carbamidomethyl (C)	_(Acetyl (Protein N-term))C(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))DDEHD_	REV__ENSG00000198854|ENST00000368775|C1orf68	3.4100154012096215	1.7418937515398478	6				NaN	NaN	0	NaN	13115	4174	17289
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17292	43.221	NaN	2532.7	30	0	165.15	0.106			+	-1	LCLAEVAQSPG	11	67	572.7874769479888	NaN	0	572.7897338867188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LC(Carbamidomethyl (C))LAEVAQSPG_	REV__ENSG00000185909|ENST00000332780|KLHDC8B	39.252832667884924	0.39048276625972167	6				NaN	NaN	0	NaN	13116	4174	17289
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17293	43.223	NaN	2672.2	30	0	214.28	0.106	+			8984	EFPQINYQK	9	63	583.7955624271027	1165.5765719210053	2	583.7966918945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EFPQINYQK_	ENSG00000116745|ENST00000262340|RPE65	27.882242232435846	0.5426732730940306	6				NaN	NaN	0	NaN	13117	4174	17289
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17294	43.224	NaN	2051.8	30	0	304.22	0.031				-1	 	0	50	377.72516096961465	NaN	0	377.7253112792969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13118	4174	17289
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17301	43.242	NaN	4660.1	30	0	866.5	0.215	+			46745	VGRLMRYL	8	51	336.5344378546052	NaN	0	336.5343322753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VGRLMRYL_	ENSG00000099284|ENST00000373255|MACROH2A2	26.79610172149135	1.7418937515398478	6				NaN	NaN	0	NaN	13122	4177	17300
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17302	43.246	NaN	2363.4	30	0	73.637	0.106			+	9596	ELLEGLLGNIT	11	56	391.2248229980469	NaN	0	391.2248229980469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ELLEGLLGNIT_	REV__nc|ENSG00000255221|Q5XLA6|CARD17P	21.780426970141523	0.456735970842152	6				NaN	NaN	0	NaN	13123	4177	17300
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17303	43.248	NaN	3673.1	30	0	430.51	0.106	+			33158	RETFQVLNM	9	72	569.288387651406	1136.5622223696118	2	569.2894897460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RETFQVLNM_	ENSG00000196235|ENST00000432763|SUPT5H;ENST00000599335.5_1_19:39959399-39965382:+|nuORF;nc|ENSG00000196235|O00267-2|SUPT5H;SUPT5H|p.L553V|1|0.29|ENSG00000196235|chr19:39470503-39470503|C/G|missense_variant;SUPT5H|p.P800Hfs*154|1|0.21|ENSG00000196235|chr19:39473425-39473425|C/-|frameshift_variant	42.86426827375447	0.38666266728046506	6				NaN	NaN	0	NaN	13124	4177	17300
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17304	43.25	NaN	2770.9	30	0	496.08	0.106				-1	 	0	52	471.7832604723801	941.5519680115602	2	471.7841491699219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13125	4177	17300
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17305	43.251	NaN	1363.2	30	0	177.08	0.035			+	-1	MRKMVKAK	8	56	504.29643264151423	1006.5783123498285	2	504.2962646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_MRKM(Oxidation (M))VKAK_	REV__LACTB|p.E253Kfs*42|1|0.25|ENSG00000103642|chr15:63127489-63127489|A/-|frameshift_variant	33.51558372728122	0.7005509609380386	6				NaN	NaN	0	NaN	13126	4177	17300
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17311	43.268	NaN	4774.2	30	0	527.28	0.214	+			11582	FPNVYALLK	9	67	532.8105566857796	1063.606560438359	2	532.8130493164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FPNVYALLK_	ENSG00000137492|ENST00000260045|THAP12;ENST00000520248.1_1_8:79672597-79674655:-|nuORF	54.722347961057174	0.257609425301511	6				NaN	NaN	0	NaN	13129	4180	17310
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17312	43.271	NaN	3704.1	30	0	363.74	0.106			+	18922	IVNCCHVLF	9	70	552.7724121247791	1103.530271316358	2	552.7752685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_IVNC(Carbamidomethyl (C))CHVLF_	REV__ENSG00000124568|ENST00000244527|SLC17A1;REV__nc|ENSG00000124568|Q14916-2|SLC17A1	50.0245360154114	0.3026755932229825	6				NaN	NaN	0	NaN	13130	4180	17310
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17313	43.273	NaN	1609.5	30	0	133.24	0.031	+			13418	GLGIEAYVKV	10	47	350.2067412282222	NaN	0	350.206787109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GLGIEAYVKV_	DNAH3|p.E3315Dfs*37|1|0.1|ENSG00000158486|chr16:20963939-20963940|-/A|frameshift_variant;DNAH3|p.G2194Efs*14|1|0.34|ENSG00000158486|chr16:20997303-20997303|C/-|frameshift_variant;DNAH3|p.I2375Sfs*8|1|0.13|ENSG00000158486|chr16:20985619-20985619|T/-|frameshift_variant;DNAH3|p.V2829Yfs*9|1|0.43|ENSG00000158486|chr16:20965399-20965399|C/-|frameshift_variant;ENSG00000158486|ENST00000698260|DNAH3;ENST00000572640.5_1_16:21008599-21073979:-|nuORF;nc|ENSG00000158486|Q8TD57-3|DNAH3;nc|ENSG00000158486|Q8TD57|DNAH3	30.503639358989545	0.4000169810673414	6				NaN	NaN	0	NaN	13131	4180	17310
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17319	43.288	NaN	5478.8	30	0	1548.7	0.214	+			10934	FDRDFQIR	8	70	548.7810183426807	1095.5474837521613	2	548.7827758789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FDRDFQIR_	MYO1D|p.R504Q|1|0.17|ENSG00000176658|chr17:32748963-32748963|C/T|missense_variant	42.396135135203025	0.6414440140393314	6				NaN	NaN	0	NaN	13134	4183	17318
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17320	43.292	NaN	2672.8	30	0	358.17	0.106				-1	YMESKCQAV	9	66	558.2496338809757	NaN	0	558.248779296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_YMESKC(Carbamidomethyl (C))QAV_	nc|ENSG00000182712|P56277|CMC4	26.69291269510374	0.34280015626154364	6				NaN	NaN	0	NaN	13135	4183	17318
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17321	43.294	NaN	2009.6	30	0	138.12	0.037			+	-1	LMYMYLVVT	9	72	582.7877860269435	1163.561019120687	2	582.78955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Oxidation (M)	_LM(Oxidation (M))YM(Oxidation (M))YLVVT_	REV__ENST00000378536.4_1_1:2240819-2241002:+|nuORF	28.2542754592877	0.5391964248700117	6				NaN	NaN	0	NaN	13136	4183	17318
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17328	43.312	NaN	2794.3	30	0	284.39	0.214	+			22441	KTLDSALFY	9	64	529.2806986480023	1056.5468443628044	2	529.2821044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KTLDSALFY_	ENSG00000162402|ENST00000294383|USP24;ENST00000512504.1_1_1:55549560-55551824:-|nuORF	42.86426827375447	0.38666266728046506	6				NaN	NaN	0	NaN	13140	4186	17327
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17329	43.315	NaN	2374.4	30	0	325.44	0.106	+			29099	NTMTLGDIVFK	11	73	627.8220115787677	1253.6294702243354	2	627.8234252929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_NTM(Oxidation (M))TLGDIVFK_	ENSG00000163586|ENST00000295834|FABP1;nc|ENSG00000170325|Q9NQV6-6|PRDM10	43.650786325866115	0.5079891456189096	6				NaN	NaN	0	NaN	13141	4186	17327
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17330	43.317	NaN	1834.5	30	0	234.13	0.106			+	36971	SIMGHFLL	8	49	459.2490869190987	NaN	0	459.24884033203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SIMGHFLL_	REV__ENST00000425395.5_1_2:175711684-175816905:-|nuORF	49.21078951299608	1.7418937515398478	6				NaN	NaN	0	NaN	13142	4186	17327
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17331	43.319	NaN	1314.6	30	0	104.38	0.034	+			21178	KKYADVII	8	55	475.2880463475682	948.5615397619364	2	475.2899169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KKYADVII_	ENSG00000130717|ENST00000372215|UCK1;ENSG00000143179|ENST00000367879|UCK2;ENST00000463772.5_1_1:165867222-165877057:+|nuORF;ENST00000479872.5_1_1:165872390-165877057:+|nuORF;ENST00000491309.5_1_9:134400429-134401843:-|nuORF;nc|ENSG00000130717|Q9HA47-3|UCK1;nc|ENSG00000130717|Q9HA47-4|UCK1;nc|ENSG00000143179|Q9BZX2-2|UCK2	33.51558372728122	0.7005509609380386	6				NaN	NaN	0	NaN	13143	4186	17327
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17337	43.334	NaN	2267.7	30	0	465.54	0.214			+	21896	KRRKALPA	8	54	470.31412411605504	938.6136952989101	2	470.3151550292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KRRKALPA_	REV__ENSG00000100784|ENST00000614987|RPS6KA5;REV__ENSG00000162302|ENST00000334205|RPS6KA4;REV__nc|ENSG00000100784|O75582-3|RPS6KA5;REV__nc|ENSG00000162302|O75676-2|RPS6KA4	20.481830146152948	0.8005983782650069	6				NaN	NaN	0	NaN	13146	4189	17336
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17338	43.337	NaN	2417.5	30	0	321.37	0.106			+	26522	LTQFLPGAL	9	56	480.28198887121687	958.5494248092338	2	480.2829284667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LTQFLPGAL_	REV__ENSG00000174373|ENST00000680220|RALGAPA1;REV__ENST00000443361.1_1_9:108283251-108284913:+|nuORF;REV__ENST00000554652.5_1_14:36147090-36221314:-|nuORF;REV__ENST00000554704.5_1_14:36176787-36221314:-|nuORF;REV__nc|ENSG00000174373|Q6GYQ0-2|RALGAPA1;REV__nc|ENSG00000174373|Q6GYQ0-3|RALGAPA1;REV__nc|ENSG00000174373|Q6GYQ0-4|RALGAPA1;REV__nc|ENSG00000174373|Q6GYQ0-5|RALGAPA1;REV__nc|ENSG00000174373|Q6GYQ0-6|RALGAPA1;REV__nc|ENSG00000174373|Q6GYQ0-7|RALGAPA1;REV__nc|ENSG00000174373|Q6GYQ0|RALGAPA1;REV__RALGAPA1|p.H698Afs*9|1|0.27|ENSG00000174373|chr14:35723040-35723041|-/T|frameshift_variant;REV__RALGAPA1|p.N1861Tfs*6|1|0.34|ENSG00000174373|chr14:35595743-35595743|T/-|frameshift_variant	51.33545320467046	0.2872990594074956	6				NaN	NaN	0	NaN	13147	4189	17336
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17339	43.339	NaN	1966.5	30	0	144.77	0.036			+	-1	LMVTGYIAAF	10	64	551.2877015043426	1100.5608500754852	2	551.8134155273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_LM(Oxidation (M))VTGYIAAF_	REV__tr|U7T2I3|U7T2I3_FUSNUCobyricacidsynthaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=cobQPE=3SV=1	35.61828744233558	0.588957954432594	6				NaN	NaN	0	NaN	13148	4189	17336
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17350	43.363	NaN	3725.2	30	0	315.96	0.214	+			18157	ILPKELQTW	9	75	564.325609192039	1126.636665450878	2	564.3271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ILPKELQTW_	ENSG00000172466|ENST00000261332|ZNF24;nc|ENSG00000172466|P17028-2|ZNF24	52.936696900407355	0.27249468807391813	6				NaN	NaN	0	NaN	13156	4192	17349
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17351	43.366	NaN	3815.2	30	0	349.66	0.106	+			28933	NRKRVLNV	8	67	499.81437145344387	997.6141899736878	2	499.81585693359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NRKRVLNV_	ENSG00000197724|ENST00000359246|PHF2;PHF2|p.K492Dfs*21|1|0.2|ENSG00000197724|chr9:93660330-93660331|AA/-|frameshift_variant;PHF2|p.K492Rfs*6|1|0.4|ENSG00000197724|chr9:93660330-93660330|A/-|frameshift_variant;PHF2|p.S183N|1|0.39|ENSG00000197724|chr9:93649158-93649158|G/A|missense_variant;PHF2|p.S954Efs*9|1|0.47|ENSG00000197724|chr9:93676611-93676612|-/A|frameshift_variant	33.51558372728122	0.7005509609380386	6				NaN	NaN	0	NaN	13157	4192	17349
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17352	43.368	NaN	3260.7	30	0	279.26	0.106			+	-1	CLNLKKMN	8	66	518.768000997531	1035.5214490618619	2	518.7694091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C),Oxidation (M)	_C(Carbamidomethyl (C))LNLKKM(Oxidation (M))N_	REV__ENST00000529943.6_1_16:31765215-31765368:+|nuORF	33.51558372728122	0.7005509609380386	6				NaN	NaN	0	NaN	13158	4192	17349
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17353	43.37	NaN	2291.5	30	0	326.37	0.106	+			50634	YEAYVEWK	8	67	544.2583421789695	1086.502131424739	2	544.2598876953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YEAYVEWK_	ENSG00000172728|ENST00000327671|FUT10;ENST00000517942.1_1_8:33229659-33246696:-|nuORF;ENST00000520767.5_1_8:33246435-33318970:-|nuORF;nc|ENSG00000172728|Q6P4F1-2|FUT10;nc|ENSG00000172728|Q6P4F1-3|FUT10;nc|ENSG00000172728|Q6P4F1-4|FUT10;nc|ENSG00000172728|Q6P4F1-5|FUT10;nc|ENSG00000172728|Q6P4F1-6|FUT10	29.14955571784316	0.7342621283720113	6				NaN	NaN	0	NaN	13159	4192	17349
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17354	43.372	NaN	1752.6	30	0	104.75	0.106			+	23506	LAGTRVNGVY	10	70	525.2922973632812	NaN	0	525.2922973632812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LAGTRVNGVY_	REV__ENST00000556809.1_1_14:23791392-23792332:+|nuORF	26.69291269510374	0.4125295221340092	6				NaN	NaN	0	NaN	13160	4192	17349
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17355	43.374	NaN	1660.4	30	0	281.01	0.035	+			8104	DYIKSGILL	9	53	511.298669588539	1020.582786243878	2	511.3005065917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_DYIKSGILL_	ENST00000451892.1_1_1:240307039-240307453:-|nuORF	27.882242232435846	0.5426732730940306	6				NaN	NaN	0	NaN	13161	4192	17349
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17361	43.391	NaN	4159.7	30	0	486.21	0.214			+	13441	GLHNLNLLSAG	11	66	554.8095321152615	1107.604511297323	2	555.3121337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GLHNLNLLSAG_	REV__TRAM1|p.Y211S|1|0.19|ENSG00000067167|chr8:70587115-70587115|T/G|missense_variant	50.79123845855914	0.4102859592092987	6				NaN	NaN	0	NaN	13164	4195	17360
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17362	43.394	NaN	1745.8	30	0	294.54	0.034				-1	 	0	54	462.76163675530375	923.5087205774075	2	462.7630310058594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13165	4195	17360
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17373	43.419	NaN	5926.5	30	0	263.09	0.214				-1	 	0	74	369.2108530715185	736.407153209837	2	369.2119445800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13173	4198	17372
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17374	43.423	NaN	2963.9	30	0	287.81	0.106	+			48741	VTVFPFNI	8	60	468.7632779959203	935.5120030586406	2	468.76470947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VTVFPFNI_	ENSG00000133027|ENST00000255389|PEMT;nc|ENSG00000133027|Q9UBM1-3|PEMT;nc|ENSG00000133027|Q9UBM1|PEMT	55.50420428727701	0.5462892107279674	6				NaN	NaN	0	NaN	13174	4198	17372
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17375	43.425	NaN	5473.3	30	0	697.41	0.106	+			19087	IYIINVHSM	9	71	545.2904698932368	1088.5663868532736	2	545.2924194335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IYIINVHSM_	ENSG00000105339|ENST00000519811|DENND3;ENST00000520571.1_1_8:142199090-142200632:+|nuORF;nc|ENSG00000105339|A2RUS2-2|DENND3;nc|ENSG00000105339|A2RUS2-3|DENND3;nc|ENSG00000105339|A2RUS2|DENND3	129.42129120953632	0.01549634589885217	6				NaN	NaN	0	NaN	13175	4198	17372
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17376	43.427	NaN	3071	30	0	351.72	0.106	+			5915	AVLDLSWNK	9	65	523.2861136063098	1044.5576742794194	2	523.2880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVLDLSWNK_	ENSG00000136045|ENST00000412830|PWP1	139.97047562133406	0.010493916756945389	6				NaN	NaN	0	NaN	13176	4198	17372
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17377	43.429	NaN	1875.7	30	0	178.91	0.106	+			27958	MVIYGCMI	8	60	493.7310107943653	985.4474686555307	2	493.73199462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_MVIYGC(Carbamidomethyl (C))MI_	ENST00000472593.1_1_3:183521690-183528368:+|nuORF	54.89457262308372	0.5523244765420926	6				NaN	NaN	0	NaN	13177	4198	17372
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17378	43.43	NaN	1917.7	30	0	342.76	0.106			+	29014	NSPRVGLI	8	53	428.2568930992594	854.4992332653188	2	428.2581481933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NSPRVGLI_	REV__ENSG00000213079|ENST00000367178|SCAF8;REV__nc|ENSG00000213079|Q9UPN6-2|SCAF8;REV__SCAF8|p.L984*|1|0.58|ENSG00000213079|chr6:154832525-154832525|T/-|frameshift_variant;REV__SCAF8|p.R1000Gfs*22|1|0.51|ENSG00000213079|chr6:154832572-154832572|A/-|frameshift_variant	40.5726180659479	0.6527593143185008	6				NaN	NaN	0	NaN	13178	4198	17372
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17379	43.432	NaN	1806.1	30	0	146.15	0.034	+			13450	GLIGRRRF	8	64	487.8038132440457	973.5930735548915	2	487.8053894042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GLIGRRRF_	ENSG00000141503|ENST00000355280|MINK1;ENST00000574871.1_1_17:4798302-4798913:+|nuORF;MINK1|p.D1112Gfs*17|1|0.14|ENSG00000141503|chr17:4895797-4895798|-/G|frameshift_variant;MINK1|p.E1253Rfs*14|1|0.42|ENSG00000141503|chr17:4896565-4896565|G/-|frameshift_variant;MINK1|p.F1308Lfs*15|1|0.19|ENSG00000141503|chr17:4897207-4897207|T/-|frameshift_variant;nc|ENSG00000141503|Q8N4C8-2|MINK1;nc|ENSG00000141503|Q8N4C8-3|MINK1;nc|ENSG00000141503|Q8N4C8-4|MINK1;nc|ENSG00000141503|Q8N4C8-5|MINK1	29.14955571784316	0.7342621283720113	6				NaN	NaN	0	NaN	13179	4198	17372
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17386	43.449	NaN	4137.3	30	0	256.62	0.214				-1	 	0	67	333.20036307111644	664.3861732090329	2	333.2012939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13183	4201	17385
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17387	43.452	NaN	3981.9	30	0	258.48	0.106	+			8989	EFQSPKYIF	9	65	579.795025891541	1157.5754988498818	2	579.7966918945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EFQSPKYIF_	ENSG00000055955|ENST00000266041|ITIH4;ENST00000468472.1_1_3:52853923-52864679:-|nuORF;nc|ENSG00000055955|Q14624-2|ITIH4;nc|ENSG00000055955|Q14624-3|ITIH4;nc|ENSG00000055955|Q14624-4|ITIH4	93.19546047674547	0.05585629608842056	6				NaN	NaN	0	NaN	13184	4201	17385
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17388	43.454	NaN	1552	30	0	226.79	0.106	+			33770	RPVSRREQ	8	45	343.19766570240824	NaN	0	343.1975402832031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RPVSRREQ_	ENST00000561976.5_1_16:89777082-89777376:-|nuORF;VPS9D1|p.D265Gfs*127|1|0.45|ENSG00000075399|chr16:89711366-89711367|-/C|frameshift_variant	15.641811463095205	1.7418937515398478	6				NaN	NaN	0	NaN	13185	4201	17385
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17389	43.456	NaN	2358.7	30	0	173.91	0.106			+	10804	FAKNCHHPV	9	66	526.7560497946374	1051.4975466560747	2	526.7592163085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FAKNCHHPV_	REV__ENST00000442578.5_2_7:65894980-65944034:-|nuORF	57.81127852772723	0.2318599694398087	6				NaN	NaN	0	NaN	13186	4201	17385
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17390	43.458	NaN	1265.7	30	0	182.1	0.034			+	25345	LPEESAGLGG	10	49	465.23276380807846	NaN	0	465.23297119140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LPEESAGLGG_	REV__ENSG00000168806|ENST00000305641|LCMT2;REV__ENST00000567039.1_1_15:43620629-43622752:-|nuORF	32.81241826257853	0.3924360933802784	6				NaN	NaN	0	NaN	13187	4201	17385
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17396	43.473	NaN	3413.2	30	0	450.79	0.214			+	-1	MLCRRLGI	8	65	517.7813802986075	1033.5482076640149	2	517.78271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))LC(Carbamidomethyl (C))RRLGI_	REV__ENSG00000125903|ENST00000246105|DEFB129	44.53106598305862	0.628196326904373	6				NaN	NaN	0	NaN	13190	4204	17395
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17397	43.476	NaN	2651.2	30	0	388.83	0.106			+	25056	LLKSGEQLQL	10	63	564.8327313427814	1127.6509097523626	2	564.836181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LLKSGEQLQL_	REV__EVPL|p.E1616G|1|0.2|ENSG00000167880|chr17:76008358-76008358|T/C|missense_variant	58.22992032128504	0.38193887838457763	6				NaN	NaN	0	NaN	13191	4204	17395
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17398	43.478	NaN	936.4	30	0	89.898	0.031				-1	 	0	30	356.22454835066736	710.4345437681347	2	356.2255554199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13192	4204	17395
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17405	43.496	NaN	5063.5	30	0	585.98	0.212				-1	QDPARPQEPTM	11	77	643.2956973376996	1284.5768417421991	2	643.2976684570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_QDPARPQEPTM(Oxidation (M))_	ENSG00000140464|ENST00000268058|PML;nc|ENSG00000140464|P29590-10|PML;nc|ENSG00000140464|P29590-11|PML;nc|ENSG00000140464|P29590-12|PML;nc|ENSG00000140464|P29590-13|PML;nc|ENSG00000140464|P29590-14|PML;nc|ENSG00000140464|P29590-2|PML;nc|ENSG00000140464|P29590-3|PML;nc|ENSG00000140464|P29590-4|PML;nc|ENSG00000140464|P29590-5|PML;nc|ENSG00000140464|P29590-8|PML;nc|ENSG00000140464|P29590-9|PML;PML|p.E27Rfs*71|1|0.43|ENSG00000140464|chr15:73994885-73994885|C/-|frameshift_variant;PML|p.K394Efs*22|1|0.53|ENSG00000140464|chr15:74023400-74023401|-/G|frameshift_variant	62.107414245175825	0.30464354921554965	6				NaN	NaN	0	NaN	13196	4207	17404
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17406	43.5	NaN	3992.3	30	0	1037.6	0.106	+			12334	GDKDSKLLLE	10	55	373.20987774270935	NaN	0	373.2097473144531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GDKDSKLLLE_	ENSG00000083168|ENST00000265713|KAT6A;KAT6A|p.D1243Mfs*51|1|0.24|ENSG00000083168|chr8:41934493-41934493|C/-|frameshift_variant;KAT6A|p.P1694Tfs*13|1|0.25|ENSG00000083168|chr8:41933141-41933142|-/G|frameshift_variant	34.172542307311794	0.38797011891751465	6				NaN	NaN	0	NaN	13197	4207	17404
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17407	43.502	NaN	6536.8	30	0	714.38	0.106			+	36550	SFLSAPKTFP	10	77	547.7972171164922	1093.5798812997843	2	547.7997436523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SFLSAPKTFP_	REV__ENSG00000145348|ENST00000394708|TBCK;REV__ENST00000510927.5_1_4:106967729-107168455:-|nuORF;REV__nc|ENSG00000145348|Q8TEA7-2|TBCK;REV__nc|ENSG00000145348|Q8TEA7-3|TBCK	45.97224482568171	0.49411383603842696	6				NaN	NaN	0	NaN	13198	4207	17404
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17408	43.503	NaN	4208.9	30	0	277.11	0.106			+	32041	QRRSYRGIF	9	64	591.8278135342455	1181.6410741352909	2	591.8299560546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QRRSYRGIF_	REV__ENSG00000155275|ENST00000389737|TRMT44;REV__ENST00000532477.1_1_4:8456189-8477725:+|nuORF;REV__nc|ENSG00000155275|Q8IYL2-2|TRMT44;REV__nc|ENSG00000155275|Q8IYL2-3|TRMT44	32.81241826257853	0.4965981579233955	6				NaN	NaN	0	NaN	13199	4207	17404
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17409	43.505	NaN	2024.4	30	0	215.09	0.035			+	-1	ITTAMVVMI	9	55	497.76984229511214	993.5251316570243	2	497.7715148925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_ITTAM(Oxidation (M))VVMI_	REV__tr|U7T6J7|U7T6J7_FUSNUAGCSfamilyalanineorglycine:cationsymporterOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00264PE=3SV=1	33.51558372728122	0.4900267029546261	6				NaN	NaN	0	NaN	13200	4207	17404
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17417	43.525	NaN	3305.8	30	0	397.02	0.214			+	7507	DGLLSVEKR	9	61	508.78991043283025	1015.5652679324605	2	508.79229736328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DGLLSVEKR_	REV__ENST00000398645.6_1_11:67024848-67025070:+|nuORF	53.08895987439943	0.27122541748218487	6				NaN	NaN	0	NaN	13205	4210	17416
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17418	43.529	NaN	2624.5	30	0	195.47	0.106	+			49564	VYDQQREVY	9	70	600.2889422556516	1198.563331578103	2	600.2909545898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYDQQREVY_	CEP55|p.D247Ifs*9|1|0.25|ENSG00000138180|chr10:93516987-93516987|A/-|frameshift_variant;ENSG00000138180|ENST00000371485|CEP55;nc|ENSG00000138180|Q53EZ4-2|CEP55	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	13206	4210	17416
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17419	43.531	NaN	1845.9	30	0	280.68	0.106	+			50476	YAIGNAPEL	9	53	474.2441015035686	946.4736500739372	2	474.2448425292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YAIGNAPEL_	ENSG00000163930|ENST00000460680|BAP1	73.97473282117947	0.12360187025703594	6				NaN	NaN	0	NaN	13207	4210	17416
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17420	43.532	NaN	2107.2	30	0	379.8	0.106	+			10680	EYSYEQFLF	9	67	613.2747413437507	1224.5349297543014	2	613.2764892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EYSYEQFLF_	ENSG00000095303|ENST00000362012|PTGS1;nc|ENSG00000095303|P23219-4|PTGS1;nc|ENSG00000095303|P23219-5|PTGS1;nc|ENSG00000095303|P23219-6|PTGS1	29.14955571784316	0.5308295550522326	6				NaN	NaN	0	NaN	13208	4210	17416
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17421	43.534	NaN	2191	30	0	264.23	0.106	+			21885	KRPNMEIKI	9	65	564.8327313427814	1127.6509097523626	2	564.8352661132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KRPNMEIKI_	ENST00000547013.1_1_12:50153049-50155509:+|nuORF	38.753607047826485	0.4348790777924195	6				NaN	NaN	0	NaN	13209	4210	17416
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17422	43.536	NaN	2051.4	30	0	163.2	0.106			+	13060	GFALTIIALY	10	57	541.316203092199	1080.6178532511979	2	541.3173217773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GFALTIIALY_	REV__tr|U7T6Y8|U7T6Y8_FUSNUBranched-chainaminoacidtransportsystempermeaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00056PE=4SV=1	37.15910966729921	0.575322462179216	6				NaN	NaN	0	NaN	13210	4210	17416
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17423	43.538	NaN	1984.2	30	0	169.54	0.037				-1	FFNDLDLLM	9	61	572.2756441347548	1142.5367353363094	2	572.2772216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_FFNDLDLLM(Oxidation (M))_	ENSG00000144218|ENST00000672756|AFF3;nc|ENSG00000144218|P51826-2|AFF3	34.172542307311794	0.4838870758800184	6				NaN	NaN	0	NaN	13211	4210	17416
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17431	43.556	NaN	7166.7	30	0	1002.4	0.214			+	1562	AGGKGKSA	8	68	338.19249238833766	674.3704318434753	2	338.19342041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AGGKGKSA_	REV__ENSG00000122218|ENST00000241704|COPA;REV__nc|ENSG00000122218|P53621-2|COPA	8.822329726475273	0.7821568878176242	6				NaN	NaN	0	NaN	13216	4213	17430
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17432	43.56	NaN	4604.1	30	0	476.24	0.106			+	-1	IAALITSLSM	10	63	518.2928570696153	1034.5711612060304	2	518.2947998046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_IAALITSLSM(Oxidation (M))_	REV__ENSG00000177463|ENST00000425241|NR2C2;REV__ENST00000475707.5_1_3:15045421-15079667:+|nuORF;REV__nc|ENSG00000177463|P49116-2|NR2C2;REV__NR2C2|p.F563Lfs*10|1|0.4|ENSG00000177463|chr3:15042899-15042899|T/-|frameshift_variant	35.61828744233558	0.588957954432594	6				NaN	NaN	0	NaN	13217	4213	17430
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17433	43.562	NaN	3339.6	30	0	426.37	0.106			+	28329	NEGEAPVNNI	10	65	528.7531481609892	1055.4917433887783	2	528.7551879882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NEGEAPVNNI_	REV__ENSG00000153310|ENST00000694912|CYRIB;REV__ENST00000517801.5_1_8:130863079-130874553:-|nuORF;REV__ENST00000523288.5_1_8:130864395-130891707:-|nuORF;REV__nc|ENSG00000153310|Q9NUQ9-2|CYRIB	65.46538089061403	0.31613324008013116	6				NaN	NaN	0	NaN	13218	4213	17430
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17434	43.563	NaN	1380.9	30	0	86.005	0.106			+	42840	TEENVPLQ	8	52	465.23276380807846	NaN	0	464.7892761230469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TEENVPLQ_	REV__ENSG00000143442|ENST00000271715|POGZ;REV__nc|ENSG00000143442|Q7Z3K3-2|POGZ;REV__nc|ENSG00000143442|Q7Z3K3-3|POGZ;REV__nc|ENSG00000143442|Q7Z3K3-5|POGZ;REV__nc|ENSG00000143442|Q7Z3K3-6|POGZ;REV__nc|ENSG00000143442|Q7Z3K3-7|POGZ	37.15910966729921	1.7418937515398478	6				NaN	NaN	0	NaN	13219	4213	17430
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17435	43.565	NaN	4872.4	30	0	3568.7	0.106				-1	 	0	49	346.705721676823	691.396890420446	2	346.70654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13220	4213	17430
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17436	43.567	NaN	926.63	30	0	189.73	0.106			+	28858	NPVVLKTK	8	48	449.7890625	NaN	0	449.7890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NPVVLKTK_	REV__ENSG00000184368|ENST00000379643|MAP7D2;REV__nc|ENSG00000184368|Q96T17-4|MAP7D2;REV__nc|ENSG00000184368|Q96T17-5|MAP7D2;REV__nc|ENSG00000184368|Q96T17|MAP7D2	25.450171626174864	1.7418937515398478	6				NaN	NaN	0	NaN	13221	4213	17430
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17437	43.569	NaN	2274.7	30	0	126.53	0.037	+			6664	AYVHMVTHF	9	70	560.7645874023438	NaN	0	560.7645874023438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_AYVHM(Oxidation (M))VTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	63.30626980617807	0.13521764763214936	6				NaN	NaN	0	NaN	13222	4213	17430
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17450	43.597	NaN	5189.3	30	0	259.45	0.214				-1	 	0	77	391.22382613315614	780.4330993331123	2	391.2249450683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13232	4216	17449
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17451	43.6	NaN	2723.7	30	0	228.53	0.106				-1	 	0	61	411.2230265251697	410.2157500585697	1	413.2380065917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13233	4216	17449
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17452	43.602	NaN	2842.9	30	0	178.29	0.106	+			27386	MKKSVCLDR	9	70	540.2885686537035	1078.5625843742068	2	540.290283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MKKSVCLDR_	ENSG00000178295|ENST00000381254|GEN1	93.19546047674547	0.05585629608842056	6				NaN	NaN	0	NaN	13234	4216	17449
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17453	43.604	NaN	2056.6	30	0	141.2	0.106			+	-1	CLHPVHPLL	9	70	543.3016079699679	NaN	0	543.3016967773438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_C(Carbamidomethyl (C))LHPVHPLL_	REV__ENST00000582276.1_1_17:37830882-37844267:-|nuORF	39.021493756699265	0.2805557132942146	6				NaN	NaN	0	NaN	13235	4216	17449
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17454	43.606	NaN	1997.5	30	0	256.81	0.106	+			41025	SVHNFFNL	8	65	489.2449003774922	NaN	0	489.245361328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SVHNFFNL_	RB1|p.K130N|1|0.09|ENSG00000139687|chr13:48345089-48345089|A/C|missense_variant	42.396135135203025	1.7418937515398478	6				NaN	NaN	0	NaN	13236	4216	17449
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17455	43.608	NaN	3121.7	30	0	243.07	0.106	+			29938	PMLQKLLNM	9	70	552.3006442279886	1102.5867355227772	2	552.3038940429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_PMLQKLLNM(Oxidation (M))_	ENST00000545335.5_2_10:22826185-22828949:-|nuORF	55.50420428727701	0.2510918378945873	6				NaN	NaN	0	NaN	13237	4216	17449
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17456	43.61	NaN	1613.7	30	0	222.15	0.033			+	-1	SVLSAVRI	8	46	443.7704637646289	885.5263745960578	2	443.77117919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SVLSAVRI_	REV__ENSG00000179044|ENST00000314586|EXOC3L1;REV__EXOC3L1|p.E431V|1|0.31|ENSG00000179044|chr16:67186650-67186650|T/A|missense_variant	42.396135135203025	0.6414440140393314	6				NaN	NaN	0	NaN	13238	4216	17449
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17465	43.63	NaN	4112.3	30	0	272.93	0.214	+			16715	HLESKQSLN	9	65	528.2779495793561	1054.5413462255121	2	528.2802124023438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HLESKQSLN_	ENSG00000111837|ENST00000354489|MAK;MAK|p.N378Kfs*5|1|0.26|ENSG00000111837|chr6:10796007-10796008|-/T|frameshift_variant;nc|ENSG00000111837|P20794-3|MAK;nc|ENSG00000111837|P20794|MAK	49.44154591367651	0.3095138337212152	6				NaN	NaN	0	NaN	13244	4219	17464
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17466	43.633	NaN	5888.2	30	0	1914	0.106				-1	 	0	33	219.12271311053024	NaN	0	219.12257385253906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13245	4219	17464
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17467	43.635	NaN	2845.9	30	0	285.05	0.106			+	11747	FSHLTTNGK	9	60	502.762121214835	1003.5096894964701	2	502.76422119140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FSHLTTNGK_	REV__MRC1|p.N348H|1|0.4|ENSG00000260314|chr10:17845414-17845414|A/C|missense_variant	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	13246	4219	17464
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17468	43.637	NaN	1674.9	30	0	122.08	0.106			+	-1	NVMLEGAAPK	10	41	349.18435296823503	NaN	0	349.18414306640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_NVM(Oxidation (M))LEGAAPK_	REV__ENST00000537507.1_1_12:12841604-12841841:-|nuORF	22.579656572578934	0.4201028297492154	6				NaN	NaN	0	NaN	13247	4219	17464
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17469	43.639	NaN	2669.1	30	0	441.52	0.106	+			47572	VRHKSTRK	8	63	506.3119453161117	1010.6093376990234	2	506.31298828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VRHKSTRK_	ENSG00000067900|ENST00000399799|ROCK1;ROCK1|p.I1150Nfs*5|1|0.23|ENSG00000067900|chr18:20959903-20959904|-/T|frameshift_variant;ROCK1|p.K1307Nfs*3|1|0.28|ENSG00000067900|chr18:20953718-20953718|T/-|frameshift_variant;ROCK1|p.K818Efs*6|1|0.51|ENSG00000067900|chr18:20984387-20984388|TT/-|frameshift_variant;ROCK1|p.L268Yfs*6|1|0.3|ENSG00000067900|chr18:21042582-21042582|A/-|frameshift_variant;ROCK1|p.N871Kfs*14|1|0.07|ENSG00000067900|chr18:20979951-20979952|-/T|frameshift_variant;ROCK1|p.N871Tfs*5|1|0.29|ENSG00000067900|chr18:20979952-20979952|T/-|frameshift_variant;ROCK1|p.P1257Lfs*3|1|0.21|ENSG00000067900|chr18:20954866-20954866|G/-|frameshift_variant;ROCK1|p.W122Lfs*25|1|0.4|ENSG00000067900|chr18:21049143-21049144|-/A|frameshift_variant	25.57405402267927	0.7618694492699909	6				NaN	NaN	0	NaN	13248	4219	17464
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17470	43.641	NaN	3455.7	30	0	359.64	0.106			+	28558	NKARLHPK	8	62	482.2959115060259	962.5772700788518	2	482.2967834472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_NKARLHPK_	REV__ENSG00000177606|ENST00000371222|JUN;REV__JUN|p.G67Wfs*40|1|0.2|ENSG00000177606|chr1:58782872-58782873|-/A|frameshift_variant;REV__JUN|p.R257Kfs*53|1|0.31|ENSG00000177606|chr1:58782301-58782302|-/T|frameshift_variant	47.91560031466742	0.6071945918984287	6				NaN	NaN	0	NaN	13249	4219	17464
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17471	43.642	NaN	2736.2	30	0	265.08	0.036	+			11281	FKDGKPLFL	9	76	532.8105566857796	1063.606560438359	2	532.812255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FKDGKPLFL_	ENSG00000143341|ENST00000271588|HMCN1;HMCN1|p.G3718Afs*6|1|0.04|ENSG00000143341|chr1:186113995-186113995|G/-|frameshift_variant;HMCN1|p.L3491Hfs*10|1|0.12|ENSG00000143341|chr1:186095419-186095420|-/ATAT|frameshift_variant;HMCN1|p.S4801Rfs*11|1|0.07|ENSG00000143341|chr1:186145536-186145537|-/AGAATAA|frameshift_variant;HMCN1|p.Y2955Ifs*3|1|0.29|ENSG00000143341|chr1:186082933-186082934|-/A|frameshift_variant;nc|ENSG00000143341|Q96RW7-2|HMCN1	42.86426827375447	0.38666266728046506	6				NaN	NaN	0	NaN	13250	4219	17464
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17481	43.666	NaN	7130	30	0	1006.1	0.214			+	27390	MKLKKNMQ	8	72	518.7859020491113	1035.5572511650225	2	518.7879638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_MKLKKNM(Oxidation (M))Q_	REV__ENSG00000114487|ENST00000232603|MORC1;REV__MORC1|p.N978Kfs*2|2|0.38|ENSG00000114487|chr3:108958986-108958987|-/T|frameshift_variant;REV__nc|ENSG00000114487|Q86VD1-2|MORC1	60.97194046774394	0.49215940876911696	6				NaN	NaN	0	NaN	13257	4222	17480
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17482	43.67	NaN	4639.4	30	0	637.86	0.106	+			7969	DSTFNVFVGK	10	68	557.2815052854804	1112.5484576377607	2	557.282958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DSTFNVFVGK_	ENSG00000122642|ENST00000242209|FKBP9;ENST00000494374.5_1_7:32997059-33028356:+|nuORF;FKBP9|p.N129Ifs*10|7|0.31|ENSG00000122642|chr7:32975192-32975192|C/-|frameshift_variant;FKBP9|p.P380Lfs*6|1|0.38|ENSG00000122642|chr7:32996258-32996258|C/-|frameshift_variant;nc|ENSG00000122642|O95302-3|FKBP9	133.7523857240709	0.012419833933541829	6				NaN	NaN	0	NaN	13258	4222	17480
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17483	43.671	NaN	4442.6	30	0	491.82	0.106				-1	 	0	71	495.7829326705549	989.5513124079098	2	495.7840576171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13259	4222	17480
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17484	43.673	NaN	3343.4	30	0	1161.7	0.106				-1	 	0	66	522.7937909067288	1043.5730288802574	2	522.7952880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13260	4222	17480
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17485	43.675	NaN	4087.3	30	0	342.29	0.106	+			11475	FNSSKSPKVSL	11	71	597.3300826737415	1192.6456124142828	2	597.3319091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FNSSKSPKVSL_	ENST00000513347.1_1_17:46972190-46972301:+|nuORF	47.95952297671804	0.44903247279694136	6				NaN	NaN	0	NaN	13261	4222	17480
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17486	43.677	NaN	2804.4	30	0	348.61	0.106			+	37705	SLSREVTAL	9	59	488.27659221155335	974.5386314899067	2	488.2791748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SLSREVTAL_	REV__ENSG00000205213|ENST00000379214|LGR4;REV__nc|ENSG00000205213|Q9BXB1-2|LGR4	47.657333605630114	0.33044192980041115	6				NaN	NaN	0	NaN	13262	4222	17480
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17487	43.679	NaN	3695.3	30	0	275.96	0.035				-1	 	0	62	492.29071321766435	982.5668735021287	2	492.2924499511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13263	4222	17480
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17498	43.704	NaN	4844.5	30	0	482.92	0.214	+			14017	GSFVGELMYK	10	67	565.7791690592878	1129.5437851853756	2	565.7803344726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GSFVGELMYK_	ENSG00000004864|ENST00000265631|SLC25A13;ENST00000484495.5_1_7:95799231-95818686:-|nuORF;nc|ENSG00000004864|Q9UJS0-2|SLC25A13;SLC25A13|p.N373D|1|0.26|ENSG00000004864|chr7:96184337-96184337|T/C|missense_variant	106.68306549817024	0.05784995512091477	6				NaN	NaN	0	NaN	13271	4225	17497
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17499	43.708	NaN	1718.2	30	0	120.25	0.106	+			23982	LDVRITAL	8	60	450.7791129780392	NaN	0	450.779296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LDVRITAL_	ENSG00000047410|ENST00000367478|TPR;TPR|p.P2083Qfs*3|1|0.31|ENSG00000047410|chr1:186323735-186323735|G/-|frameshift_variant;TPR|p.T2133Lfs*63|1|0.03|ENSG00000047410|chr1:186322382-186322383|-/GTACTAATAAG|frameshift_variant	62.107414245175825	1.7418937515398478	6				NaN	NaN	0	NaN	13272	4225	17497
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17500	43.71	NaN	2667.3	30	0	181.05	0.106	+			45562	TYLSSKSQPSA	11	75	584.7962621690201	1167.5779714048401	2	584.7970581054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TYLSSKSQPSA_	CDK5RAP2|p.L1409*|1|0.2|ENSG00000136861|chr9:120415111-120415111|A/-|frameshift_variant;ENSG00000136861|ENST00000349780|CDK5RAP2;ENST00000483412.5_1_9:123170580-123298708:-|nuORF;nc|ENSG00000136861|Q96SN8-2|CDK5RAP2;nc|ENSG00000136861|Q96SN8-3|CDK5RAP2;nc|ENSG00000136861|Q96SN8-4|CDK5RAP2	61.691277971877994	0.30835813808799384	6				NaN	NaN	0	NaN	13273	4225	17497
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17501	43.711	NaN	2122	30	0	244.08	0.106				-1	 	0	47	363.67542248014433	725.3362920270887	2	363.6764831542969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13274	4225	17497
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17502	43.713	NaN	2298.7	30	0	188.92	0.106	+			47727	VSGEKHFLF	9	70	532.2858726018485	NaN	0	532.2859497070312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VSGEKHFLF_	ENSG00000243789|ENST00000397299|JMJD7;ENST00000490848.5_1_15:42120322-42128845:+|nuORF;nc|ENSG00000243708|P0C869-6|PLA2G4B;nc|ENSG00000243708|P0C869-7|PLA2G4B;nc|ENSG00000243708|P0C869-8|PLA2G4B	40.77816245573522	0.2702456086868081	6				NaN	NaN	0	NaN	13275	4225	17497
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17503	43.715	NaN	2283.8	30	0	656.77	0.106				-1	 	0	44	377.72375529407014	753.4329576549403	2	377.7249755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13276	4225	17497
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17504	43.717	NaN	1477.9	30	0	210.57	0.035	+			18154	ILPEQGVSAL	10	52	513.7952664796683	NaN	0	513.7949829101562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_ILPEQGVSAL_	ENSG00000110171|ENST00000345851|TRIM3;ENST00000536344.5_1_11:6479060-6495064:-|nuORF;nc|ENSG00000110171|O75382-2|TRIM3;nc|ENSG00000110171|O75382-3|TRIM3	47.95952297671804	0.31850267256932663	6				NaN	NaN	0	NaN	13277	4225	17497
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17517	43.745	NaN	2368	30	0	314.21	0.214	+			19134	IYNASATSVF	10	67	536.7674740096286	1071.520395086057	2	536.7689819335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IYNASATSVF_	ENSG00000127980|ENST00000248633|PEX1;ENST00000484913.5_1_7:92116773-92148321:-|nuORF;PEX1|p.R636Gfs*9|1|0.3|ENSG00000127980|chr7:92504897-92504897|T/-|frameshift_variant	58.22992032128504	0.38193887838457763	6				NaN	NaN	0	NaN	13287	4228	17516
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17518	43.748	NaN	1620.1	30	0	197.97	0.032			+	-1	CCCDDEHD	8	55	384.7720003815535	NaN	0	384.7718505859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term),3 Carbamidomethyl (C)	_(Acetyl (Protein N-term))C(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))DDEHD_	REV__ENSG00000198854|ENST00000368775|C1orf68	3.6843469609004	1.7418937515398478	6				NaN	NaN	0	NaN	13288	4228	17516
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17528	43.77	NaN	6882.5	30	0	2690.6	0.214				-1	 	0	73	580.333258314967	1158.651963696734	2	580.3345947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13295	4231	17527
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17529	43.774	NaN	3919.5	30	0	425.28	0.106			+	9532	ELAWIRLL	8	67	507.3110291968751	1012.6075054605502	2	507.3125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ELAWIRLL_	REV__ENSG00000176871|ENST00000315436|WSB2;REV__ENST00000540129.5_1_12:118472774-118472945:-|nuORF;REV__nc|ENSG00000176871|Q9NYS7-2|WSB2;REV__nc|ENSG00000176871|Q9NYS7-3|WSB2	47.657333605630114	0.6087971902037268	6				NaN	NaN	0	NaN	13296	4231	17527
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17530	43.776	NaN	5644.5	30	0	571.02	0.106	+			32207	QTAAPEVNNI	10	77	528.7715289265496	1055.5285049198992	2	528.7720336914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QTAAPEVNNI_	ENSG00000102554|ENST00000377687|KLF5;nc|ENSG00000102554|Q13887-4|KLF5	66.96192283764107	0.30252237217063654	6				NaN	NaN	0	NaN	13297	4231	17527
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17531	43.777	NaN	1596.3	30	0	113.55	0.106			+	26883	LWPKWITN	8	54	353.198746332551	NaN	0	353.19842529296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LWPKWITN_	REV__ENSG00000205667|ENST00000381130|ARSH	27.882242232435846	1.7418937515398478	6				NaN	NaN	0	NaN	13298	4231	17527
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17532	43.779	NaN	2059.3	30	0	268.74	0.106	+			49718	VYMVRAINL	9	66	539.8099265318613	NaN	0	539.8112182617188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VYMVRAINL_	ENSG00000249715|ENST00000624922|FER1L5;nc|ENSG00000249715|A0AVI2-2|FER1L5;nc|ENSG00000249715|A0AVI2-4|FER1L5	47.91560031466742	0.22105767942158736	6				NaN	NaN	0	NaN	13299	4231	17527
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17533	43.781	NaN	2891.9	30	0	421.23	0.106	+			11767	FSKMPFDV	8	58	485.73877964703837	969.4630063608768	2	485.7401428222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FSKMPFDV_	ENSG00000141449|ENST00000424526|GREB1L;ENST00000578955.1_1_18:19057140-19088617:+|nuORF;nc|ENSG00000141449|Q9C091-3|GREB1L	44.116797842482775	0.6307669463330267	6				NaN	NaN	0	NaN	13300	4231	17527
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17534	43.783	NaN	1840.8	30	0	131.4	0.038				-1	IHRSCLEHW	9	80	619.2977905273438	NaN	0	619.2977905273438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C)	_IHRSC(Carbamidomethyl (C))LEHW_	ENSG00000173926|ENST00000308660|MARCHF3;nc|ENSG00000173926|Q86UD3-2|MARCHF3	33.51558372728122	0.30835390848773375	6				NaN	NaN	0	NaN	13301	4231	17527
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17545	43.806	NaN	4439.5	30	0	952.73	0.214				-1	 	0	52	439.7513303013766	877.4881076695532	2	439.75244140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13309	4234	17544
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17546	43.81	NaN	4038.8	30	0	823.93	0.106				-1	AGRVGCKELK	10	59	373.20987774270935	NaN	0	373.20989990234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_AGRVGC(Carbamidomethyl (C))KELK_	ENST00000412565.2_3_14:24024951-24025206:-|nuORF	28.081489160057373	0.40797012399963245	6				NaN	NaN	0	NaN	13310	4234	17544
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17547	43.812	NaN	1523.8	30	0	109.85	0.106				-1	 	0	55	333.20036307111644	664.3861732090329	2	333.2012634277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13311	4234	17544
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17548	43.814	NaN	4366.7	30	0	669.99	0.106	+			31823	QPQQTFNIY	9	66	569.7788043819249	1137.5430558306498	2	569.7808837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QPQQTFNIY_	ENSG00000010327|ENST00000321725|STAB1;ENST00000481607.1_1_3:52529402-52542549:+|nuORF;nc|ENSG00000010327|Q9NY15-2|STAB1;STAB1|p.E1712Rfs*8|1|0.12|ENSG00000010327|chr3:52519356-52519357|-/C|frameshift_variant;STAB1|p.F2001Lfs*111|1|0.35|ENSG00000010327|chr3:52521452-52521452|T/-|frameshift_variant;STAB1|p.G1507Afs*84|1|0.26|ENSG00000010327|chr3:52517346-52517346|G/-|frameshift_variant;STAB1|p.L1057Sfs*33|1|0.28|ENSG00000010327|chr3:52513135-52513136|-/T|frameshift_variant;STAB1|p.P978Lfs*57|1|0.35|ENSG00000010327|chr3:52512385-52512385|C/-|frameshift_variant;STAB1|p.R1122Pfs*37|1|0.37|ENSG00000010327|chr3:52513891-52513892|-/C|frameshift_variant;STAB1|p.V800Cfs*113|1|0.34|ENSG00000010327|chr3:52509914-52509914|G/-|frameshift_variant	67.49366992349736	0.1516260258713357	6				NaN	NaN	0	NaN	13312	4234	17544
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17549	43.816	NaN	2517.6	30	0	195	0.106	+			22971	KVRAQVRA	8	56	464.2959598837656	926.5773668343312	2	464.2972717285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KVRAQVRA_	ENST00000359541.6_1_2:27564849-27564936:-|nuORF	40.5726180659479	0.6527593143185008	6				NaN	NaN	0	NaN	13313	4234	17544
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17550	43.817	NaN	1888.4	30	0	79.637	0.106			+	8411	EAQGIFVNVL	10	61	545.3016357421875	NaN	0	545.3016357421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EAQGIFVNVL_	REV__ENSG00000136521|ENST00000259037|NDUFB5;REV__ENST00000359944.10_1_3:179322640-179341825:+|nuORF;REV__ENST00000488002.5_1_3:179322588-179334847:+|nuORF	45.97224482568171	0.33106653400957564	6				NaN	NaN	0	NaN	13314	4234	17544
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17551	43.819	NaN	2168	30	0	250.15	0.036				-1	CQSPKMTTF	9	66	558.2496338809757	NaN	0	558.249267578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C),Oxidation (M)	_C(Carbamidomethyl (C))QSPKM(Oxidation (M))TTF_	CASKIN1|p.Q778Pfs*91|1|0.45|ENSG00000167971|chr16:2181035-2181036|-/G|frameshift_variant;CASKIN1|p.Q778Rfs*27|1|0.23|ENSG00000167971|chr16:2181036-2181036|G/-|frameshift_variant;ENSG00000167971|ENST00000343516|CASKIN1	40.77816245573522	0.2702456086868081	6				NaN	NaN	0	NaN	13315	4234	17544
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17561	43.841	NaN	4879	30	0	567.64	0.214			+	-1	FNMICKKKF	9	77	587.8090311131904	1173.6035092931807	2	587.8106689453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_FNM(Oxidation (M))ICKKKF_	REV__ENST00000524210.1_1_3:9433489-9435903:-|nuORF	76.84663266511073	0.11118375776443899	6				NaN	NaN	0	NaN	13322	4237	17560
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17562	43.845	NaN	4492.6	30	0	392.35	0.106	+			9905	EQPFLSVFK	9	75	547.7972171164922	1093.5798812997843	2	547.7996215820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EQPFLSVFK_	ENSG00000187583|ENST00000379410|PLEKHN1;nc|ENSG00000187583|Q494U1-2|PLEKHN1;nc|ENSG00000187583|Q494U1-3|PLEKHN1;PLEKHN1|p.P235Rfs*25|1|0.16|ENSG00000187583|chr1:970971-970971|G/-|frameshift_variant	58.22992032128504	0.22837015374068087	6				NaN	NaN	0	NaN	13323	4237	17560
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17563	43.847	NaN	3515.2	30	0	486.83	0.106	+			18895	IVLIDAHKDT	10	65	562.8195687157752	1123.6245844983503	2	562.8209838867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IVLIDAHKDT_	ENSG00000103657|ENST00000443617|HERC1;HERC1|p.L3887Pfs*44|1|0.06|ENSG00000103657|chr15:63640394-63640395|-/ATGAATGG|frameshift_variant	79.71258880314673	0.19796908725841375	6				NaN	NaN	0	NaN	13324	4237	17560
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17564	43.849	NaN	3406.7	30	0	258.52	0.106			+	11732	FSFMHSYFII	10	79	646.3121438022685	1290.6097346713368	2	646.314453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FSFMHSYFII_	REV__L1ME1_dup14741|chr8:25510836-25512219:-|1.4707505823140987|0.2188578600898351|2.75|482.0|72|1|anti-sense	42.396135135203025	0.5270658956260207	6				NaN	NaN	0	NaN	13325	4237	17560
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17565	43.85	NaN	2745.3	30	0	226.22	0.106				-1	 	0	64	591.8278135342455	1181.6410741352909	2	591.8297729492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13326	4237	17560
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17566	43.852	NaN	2074.3	30	0	206.5	0.106			+	49471	VVYKNDLF	8	64	499.27489903209903	NaN	0	499.2749938964844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VVYKNDLF_	REV__ENSG00000135801|ENST00000258281|TAF5L;REV__nc|ENSG00000135801|O75529-2|TAF5L;REV__TAF5L|p.L294Ffs*9|1|0.43|ENSG00000135801|chr1:229602287-229602287|G/-|frameshift_variant	31.954861631926434	1.7418937515398478	6				NaN	NaN	0	NaN	13327	4237	17560
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17567	43.854	NaN	3627.5	30	0	291.58	0.035				-1	 	0	68	514.309510580484	1026.604468227768	2	514.3110961914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13328	4237	17560
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17577	43.876	NaN	6197.7	30	0	574.18	0.214			+	7446	DFHLYGVNGPL	11	77	616.3089630421025	1230.603373151005	2	616.3109130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DFHLYGVNGPL_	REV__RBP3|p.R443H|1|0.48|ENSG00000265203|chr10:47349812-47349812|G/A|missense_variant	65.46538089061403	0.2746690761028526	6				NaN	NaN	0	NaN	13335	4240	17576
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17578	43.879	NaN	28258	30	0	3013.9	0.106			+	13320	GKKGAGGG	8	88	316.17951628129805	630.3444796293961	2	316.18017578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GKKGAGGG_	REV__TBX18|p.E63K|1|0.41|ENSG00000112837|chr6:84763995-84763995|C/T|missense_variant	8.822329726475273	0.7821568878176242	6				NaN	NaN	0	NaN	13336	4240	17576
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17579	43.881	NaN	4735.6	30	0	1002.4	0.106			+	13490	GLLRVRYM	8	47	336.5344378546052	NaN	0	336.5342102050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GLLRVRYM_	REV__ENST00000481125.5_1_6:27220693-27222867:+|nuORF	20.481830146152948	1.741893751539848	6				NaN	NaN	0	NaN	13337	4240	17576
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17580	43.883	NaN	3522.2	30	0	296.82	0.106	+			44888	TTVTAVKTK	9	53	474.7905360548919	947.5665191765838	2	474.79168701171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TTVTAVKTK_	ENSG00000157617|ENST00000380486|C2CD2;nc|ENSG00000157617|Q9Y426-2|C2CD2;nc|ENSG00000157617|Q9Y426-3|C2CD2	39.252832667884924	0.4290233611298554	6				NaN	NaN	0	NaN	13338	4240	17576
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17581	43.885	NaN	4035.9	30	0	394.39	0.106	+			10688	EYTLMRATF	9	68	566.277364809917	1130.540176686634	2	566.279052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_EYTLMRATF_	ENSG00000185950|ENST00000375856|IRS2	109.47833844074708	0.029530294723441826	6				NaN	NaN	0	NaN	13339	4240	17576
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17582	43.887	NaN	3183	30	0	220.11	0.106				-1	 	0	72	528.3255077677129	1054.6364626022257	2	528.3273315429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13340	4240	17576
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17583	43.889	NaN	1983.9	30	0	205.57	0.038			+	28936	NRLYDFEKD	9	71	600.2889422556516	1198.563331578103	2	600.2906494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_NRLYDFEKD_	REV__tr|U7SHJ2|U7SHJ2_FUSNUAutotransporterdomain-containingprotein(Fragment)OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02176PE=4SV=1;REV__tr|U7SS28|U7SS28_FUSNUAutotransporterdomain-containingprotein(Fragment)OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01636PE=4SV=1	37.81151784470057	0.4459294069877048	6				NaN	NaN	0	NaN	13341	4240	17576
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17591	43.907	NaN	19791	30	0	17173	0.214				-1	 	0	58	324.69278458603316	647.3710162388663	2	324.69366455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13346	4243	17590
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17592	43.91	NaN	1677	30	0	83.447	0.031				-1	 	0	50	348.64103517333797	695.267517413476	2	348.64215087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13347	4243	17590
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17601	43.93	NaN	4032.3	30	0	358.23	0.214				-1	 	0	57	338.1615754405662	674.3085979479324	2	338.1625671386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13353	4246	17600
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17602	43.934	NaN	2556	30	0	438.61	0.106	+			9405	EKGKAGTATL	10	52	488.27659221155335	974.5386314899067	2	488.272216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EKGKAGTATL_	ENSG00000103544|ENST00000417362|VPS35L	58.2462437865262	0.38179041844353556	6				NaN	NaN	0	NaN	13354	4246	17600
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17603	43.936	NaN	1259.2	30	0	53.504	0.106				-1	 	0	43	340.6378466755253	679.2611404178506	2	340.6387634277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13355	4246	17600
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17604	43.938	NaN	2206.8	30	0	192.93	0.037	+			10955	FDWKAIQEGA	10	70	582.7877860269435	1163.561019120687	2	582.7898559570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FDWKAIQEGA_	ENSG00000134982|ENST00000257430|APC;nc|ENSG00000134982|P25054-2|APC;nc|ENSG00000134982|P25054-3|APC	25.57405402267927	0.6709832231498071	6				NaN	NaN	0	NaN	13356	4246	17600
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17614	43.96	NaN	5919.5	30	0	299.31	0.214				-1	 	0	76	391.22382613315614	780.4330993331123	2	391.2250671386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13363	4249	17613
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17615	43.963	NaN	2624.4	30	0	287.31	0.106			+	35674	SDGAGGSH	8	52	344.13738992408423	686.2602269149685	2	344.1401672363281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SDGAGGSH_	REV__ENSG00000089169|ENST00000389385|RPH3A;REV__ENST00000549913.6_1_12:113307544-113334582:+|nuORF;REV__nc|ENSG00000089169|Q9Y2J0-2|RPH3A	20.481830146152948	0.8005983782650069	6				NaN	NaN	0	NaN	13364	4249	17613
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17616	43.965	NaN	2829.6	30	0	439.1	0.106	+			26155	LSQLLFLNQ	9	68	538.3112057145228	1074.6078584958454	2	538.3133544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSQLLFLNQ_	HEATR3|p.S501Lfs*12|1|0.3|ENSG00000155393|chr16:50086337-50086337|T/-|frameshift_variant	49.44154591367651	0.3095138337212152	6				NaN	NaN	0	NaN	13365	4249	17613
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17617	43.967	NaN	1122	30	0	151.27	0.034			+	-1	CLCLGPPL	8	50	465.2329935526074	NaN	0	465.2330627441406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))LC(Carbamidomethyl (C))LGPPL_	REV__ENST00000523752.5_1_8:22877945-22878461:-|nuORF	33.49298260027079	1.7418937515398478	6				NaN	NaN	0	NaN	13366	4249	17613
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17625	43.985	NaN	2022.8	30	0	234.14	0.214	+			48079	VSSTTEAGIS	10	58	476.236286069984	950.458019206768	2	476.2375793457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSSTTEAGIS_	ENST00000483977.5_1_21:35497749-35514781:+|nuORF	51.33545320467046	0.4446945571623749	6				NaN	NaN	0	NaN	13371	4252	17624
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17626	43.989	NaN	4003.2	30	0	824.39	0.106	+			9505	EKVELLEKA	9	70	529.8073486784546	1057.600144423709	2	529.8088989257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EKVELLEKA_	ENSG00000189233|ENST00000413272|NUGGC;NUGGC|p.K555Yfs*17|1|0.07|ENSG00000189233|chr8:28033646-28033647|-/AGGTA|frameshift_variant	41.42661286455405	0.403525789677298	6				NaN	NaN	0	NaN	13372	4252	17624
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17627	43.991	NaN	1818.1	30	0	206.8	0.106	+			11356	FLGRTRKG	8	53	467.7827538194283	933.5509547056566	2	467.7839050292969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FLGRTRKG_	ENST00000552876.5_1_12:53714763-53714907:-|nuORF	38.80614096846853	0.6637206697844082	6				NaN	NaN	0	NaN	13373	4252	17624
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17628	43.993	NaN	1807.7	30	0	202.94	0.106	+			11534	FPESAVKVL	9	61	495.2856933130543	988.5568336929086	2	495.2871398925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FPESAVKVL_	ENSG00000144649|ENST00000430121|GASK1A	35.61828744233558	0.47037581924408073	6				NaN	NaN	0	NaN	13374	4252	17624
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17629	43.994	NaN	1958.9	30	0	269.06	0.106	+			19166	IYRMDGSYR	9	71	588.7792429934217	NaN	0	588.7783203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Oxidation (M)	_IYRM(Oxidation (M))DGSYR_	ENSG00000001631|ENST00000394505|KRIT1;ENST00000475770.5_1_7:91830052-91864980:-|nuORF;ENST00000486261.5_1_7:91830052-91864980:-|nuORF;nc|ENSG00000001631|O00522-2|KRIT1;nc|ENSG00000001631|O00522-3|KRIT1	42.396135135203025	0.2590952873412954	6				NaN	NaN	0	NaN	13375	4252	17624
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17630	43.996	NaN	1701.9	30	0	154.11	0.035	+			9790	ENVKYGIVL	9	56	517.7981053685896	NaN	0	517.7974853515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_ENVKYGIVL_	ENSG00000138185|ENST00000371205|ENTPD1;ENST00000371206.6_1_10:97583001-97605437:+|nuORF;ENST00000490659.5_1_10:97583001-97604470:+|nuORF;ENTPD1|p.R167Kfs*27|1|0.11|ENSG00000138185|chr10:95844558-95844573|GCCAGGATCATTACTG/-|frameshift_variant;nc|ENSG00000138185|P49961-2|ENTPD1;nc|ENSG00000138185|P49961-3|ENTPD1;nc|ENSG00000138185|P49961-6|ENTPD1	32.81241826257853	0.3119040447479903	6				NaN	NaN	0	NaN	13376	4252	17624
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17638	44.014	NaN	11481	30	0	1666.7	0.214	+			790	AEFKEAFQL	9	79	541.7787900216323	1081.5430271100645	2	541.7801513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AEFKEAFQL_	ENSG00000092841|ENST00000550697|MYL6;ENST00000546630.1_1_12:56552185-56553570:+|nuORF;ENST00000547703.5_1_12:56552185-56553570:+|nuORF;ENST00000548725.5_1_12:56552185-56553955:+|nuORF;ENST00000549017.5_1_12:56552185-56553840:+|nuORF;nc|ENSG00000092841|P60660-2|MYL6	134.7655990226056	0.012935733000282069	6				NaN	NaN	0	NaN	13381	4255	17637
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17639	44.018	NaN	3804.7	30	0	765.19	0.106				-1	LSWGLMYAGF	10	71	580.7756815671254	1159.5368102010507	2	580.7774658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LSWGLM(Oxidation (M))YAGF_	ABCA9|p.F1166Lfs*5|1|0.33|ENSG00000154258|chr17:68995952-68995952|A/-|frameshift_variant;ABCA9|p.L1080*|1|0.43|ENSG00000154258|chr17:69008144-69008144|A/-|frameshift_variant;ABCA9|p.P1249Qfs*18|1|0.17|ENSG00000154258|chr17:68990930-68990930|A/-|frameshift_variant;ENSG00000154258|ENST00000340001|ABCA9;ENST00000461623.1_1_17:67029858-67045457:-|nuORF;nc|ENSG00000154258|Q8IUA7-3|ABCA9;nc|ENSG00000154258|Q8IUA7-4|ABCA9	30.503639358989545	0.6307262373768582	6				NaN	NaN	0	NaN	13382	4255	17637
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17640	44.02	NaN	2497.9	30	0	289.85	0.106			+	51131	YNISNRNKE	9	64	569.2862669110476	1136.5579808888951	2	569.287353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YNISNRNKE_	REV__BMPR2|p.E672Kfs*28|1|0.3|ENSG00000204217|chr2:202555675-202555675|A/-|frameshift_variant;REV__ENSG00000204217|ENST00000374580|BMPR2	44.377184641726394	0.36891676396732553	6				NaN	NaN	0	NaN	13383	4255	17637
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17641	44.022	NaN	2021	30	0	208.98	0.036	+			49614	VYGVRTKEI	9	69	532.8081648638283	1063.6017767944566	2	532.8101806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VYGVRTKEI_	ENSG00000180934|ENST00000641900|OR56A1;ENSG00000183389|ENST00000641156|OR56A4;ENSG00000188691|ENST00000532411|OR56A5;nc|ENSG00000180934|Q8NGH5|OR56A1;OR56A1|p.P292H|1|0.1|ENSG00000180934|chr11:6026830-6026830|G/T|missense_variant	38.80614096846853	0.43426287593479557	6				NaN	NaN	0	NaN	13384	4255	17637
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17646	44.036	NaN	2406.5	30	0	312.4	0.143	+			36586	SFWLQLVQ	8	61	510.77952348908593	1019.5444940449719	2	510.7808532714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SFWLQLVQ_	CEACAM5|p.E47Dfs*25|1|0.39|ENSG00000105388|chr19:41709755-41709756|-/T|frameshift_variant;chr19:41709823-41761249|324|15.5|0.38|5.35|+|1|None,CEACAM6|1;chr19:41709823-41807111|324|15.1|0.37|5.36|+|1|None,CEACAM3|1	60.11826168202944	0.5006107059937851	6				NaN	NaN	0	NaN	13386	4258	17645
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17654	44.056	NaN	3076.6	30	0	183.58	0.214	+			13348	GKTAGKGG	8	57	338.19249238833766	674.3704318434753	2	338.1932678222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GKTAGKGG_	ENST00000519932.5_1_6:112575345-112575919:-|nuORF	12.959181472943097	0.7887000251064199	6				NaN	NaN	0	NaN	13391	4261	17653
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17655	44.06	NaN	2249.2	30	0	220.19	0.106			+	47760	VSGQPKWDL	9	61	515.2725849224553	1028.5306169117105	2	515.2744750976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSGQPKWDL_	REV__ENSG00000165105|ENST00000376447|RASEF	30.568863376406313	0.5175653706841606	6				NaN	NaN	0	NaN	13392	4261	17653
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17656	44.062	NaN	2351.5	30	0	232.03	0.106	+			29257	NYAQVLDKF	9	73	549.2835336735955	1096.5525144139908	2	549.2860107421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NYAQVLDKF_	ASAP1|p.P792Lfs*20|1|0.1|ENSG00000153317|chr8:130112120-130112120|G/-|frameshift_variant;ENSG00000153317|ENST00000518721|ASAP1;ENST00000519169.5_1_8:131191508-131249207:-|nuORF;nc|ENSG00000153317|Q9ULH1-2|ASAP1	85.16082228582465	0.07850854922700509	6				NaN	NaN	0	NaN	13393	4261	17653
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17657	44.064	NaN	2086.4	30	0	242.59	0.106	+			26958	LYINKANIW	9	72	567.8178545716528	1133.6211562101055	2	567.820556640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LYINKANIW_	ENSG00000092140|ENST00000206595|G2E3	68.484700416344	0.1473408039581241	6				NaN	NaN	0	NaN	13394	4261	17653
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17658	44.065	NaN	2063.1	30	0	170.94	0.106	+			16676	HILVFLFY	8	72	526.3059381618432	NaN	0	526.3063354492188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_HILVFLFY_	ENST00000447202.2_1_Y:21749110-21749530:+|nuORF	54.89457262308372	1.7418937515398478	6				NaN	NaN	0	NaN	13395	4261	17653
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17659	44.067	NaN	2335.9	30	0	267.79	0.035				-1	 	0	61	503.3046200014049	502.2973435348049	1	503.30303955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13396	4261	17653
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17664	44.082	NaN	2505.2	30	0	273.95	0.213			+	-1	ITTLHCYLNM	10	75	612.7908742300134	1223.5671955268267	2	612.7926025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ITTLHCYLNM(Oxidation (M))_	REV__ENST00000375651.6_1_6:31785473-31785653:+|nuORF	40.77816245573522	0.5419747034533848	6				NaN	NaN	0	NaN	13398	4264	17663
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17665	44.085	NaN	2765.8	30	0	255.68	0.106			+	9688	ELYIAKPRM	9	62	560.8167755920015	NaN	0	560.8165893554688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ELYIAKPRM_	REV__ENST00000488564.2_1_7:27881117-27881465:+|nuORF	49.536043120802724	0.20989033510253738	6				NaN	NaN	0	NaN	13399	4264	17663
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17666	44.087	NaN	3347.4	30	0	336.83	0.106	+			28024	MYSFVNDKF	9	69	575.7635853354337	1149.5126177376674	2	576.266357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MYSFVNDKF_	ENSG00000102053|ENST00000338957|ZC3H12B;ENSG00000149289|ENST00000278590|ZC3H12C;ENSG00000163874|ENST00000373087|ZC3H12A;nc|ENSG00000102053|Q5HYM0-2|ZC3H12B;nc|ENSG00000149289|Q9C0D7-2|ZC3H12C;ZC3H12A|p.P532Qfs*41|1|0.51|ENSG00000163874|chr1:37483402-37483402|C/-|frameshift_variant;ZC3H12B|p.S479Afs*71|1|0.28|ENSG00000102053|chrX:65502124-65502124|C/-|frameshift_variant;ZC3H12B|p.V574Cfs*14|1|0.11|ENSG00000102053|chrX:65502413-65502413|G/-|frameshift_variant	63.53385203322761	0.18415635464017938	6				NaN	NaN	0	NaN	13400	4264	17663
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17667	44.089	NaN	1464.6	30	0	157.27	0.038				-1	GHYTALCRCQ	10	62	604.7671340602291	1207.519715187258	2	604.7683715820312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_GHYTALCRC(Carbamidomethyl (C))Q_	ENSG00000143258|ENST00000368002|USP21;ENST00000485277.1_1_1:161133669-161135234:+|nuORF;ENST00000487163.5_1_1:161134308-161135234:+|nuORF;nc|ENSG00000143258|Q9UK80-3|USP21	34.172542307311794	0.6007644933930345	6				NaN	NaN	0	NaN	13401	4264	17663
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17675	44.107	NaN	3711.7	30	0	264.43	0.214			+	33877	RRLVQGRLGA	10	71	563.351650339371	1124.6887477455418	2	563.3534545898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RRLVQGRLGA_	REV__ENST00000372677.7_1_X:102564842-102565956:-|nuORF	40.77816245573522	0.5419747034533848	6				NaN	NaN	0	NaN	13406	4267	17674
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17676	44.111	NaN	3171.8	30	0	206.16	0.035			+	25388	LPHWARLF	8	68	520.2977427568223	1038.5809325804446	2	520.3013305664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LPHWARLF_	REV__MATK|p.P36Lfs*125|2|0.34|ENSG00000007264|chr19:3784850-3784850|G/-|frameshift_variant	45.9519527083369	0.6193794311207887	6				NaN	NaN	0	NaN	13407	4267	17674
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17680	44.125	NaN	3853.5	30	0	1060.2	0.144			+	-1	ARHGWAAPR	9	59	532.2809956667074	1062.5474384002148	2	532.2826538085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))ARHGWAAPR_	REV__ENST00000495427.1_2_1:46810505-46812688:+|nuORF	23.04248740728303	0.5879033540491928	6				NaN	NaN	0	NaN	13408	4270	17679
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17690	44.149	NaN	1192.7	30	0	125.02	0.138				-1	 	0	46	333.20036307111644	664.3861732090329	2	333.2012939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13415	4273	17689
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17699	44.172	NaN	9115.5	30	0	752.84	0.214			+	43759	TLGESQKQM	9	75	511.25317551723606	1020.4917981012721	2	511.2548828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TLGESQKQM_	REV__ENST00000563143.2_1_16:32882346-32883351:+|nuORF	59.93077597824379	0.21419174904018318	6				NaN	NaN	0	NaN	13421	4276	17698
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17700	44.176	NaN	3607.5	30	0	312.79	0.035	+			36328	SESPVWVKL	9	71	522.7889685342182	1043.5633841352362	2	522.7900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SESPVWVKL_	ENSG00000144426|ENST00000683969|NBEAL1;NBEAL1|p.F1670Lfs*25|1|0.21|ENSG00000144426|chr2:203144843-203144843|T/-|frameshift_variant;NBEAL1|p.F2315Lfs*2|1|0.17|ENSG00000144426|chr2:203193900-203193900|T/-|frameshift_variant;NBEAL1|p.K2562Rfs*15|1|0.41|ENSG00000144426|chr2:203209306-203209306|A/-|frameshift_variant;NBEAL1|p.N2072Kfs*10|1|0.35|ENSG00000144426|chr2:203172825-203172826|-/A|frameshift_variant;nc|ENSG00000144426|Q6ZS30-1|NBEAL1;nc|ENSG00000144426|Q6ZS30|NBEAL1	60.11826168202944	0.21262886028301267	6				NaN	NaN	0	NaN	13422	4276	17698
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17707	44.192	NaN	4962.4	30	0	512.28	0.214	+			23822	LCSDFIWGLA	10	78	562.7758783405567	1123.5372037479133	2	562.7782592773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LCSDFIWGLA_	ENSG00000145214|ENST00000273814|DGKQ	55.50420428727701	0.4067289358710215	6				NaN	NaN	0	NaN	13426	4279	17706
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17708	44.196	NaN	1609.5	30	0	157.01	0.106	+			11969	FVMLVMMIF	9	61	573.793664968436	1145.572777003672	2	573.7965087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_FVMLVM(Oxidation (M))MIF_	ENST00000544440.6_1_13:77625173-77629724:-|nuORF	49.21078951299608	0.3122205139198386	6				NaN	NaN	0	NaN	13427	4279	17706
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17709	44.198	NaN	2977.5	30	0	393.13	0.036	+			7961	DSRLPPPPTL	10	64	546.8047288893171	1091.594904845434	2	546.8075561523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DSRLPPPPTL_	BRPF3|p.K831R|1|0.29|ENSG00000096070|chr6:36213889-36213889|A/G|missense_variant	35.15202426646627	0.5927656479315102	6				NaN	NaN	0	NaN	13428	4279	17706
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17718	44.219	NaN	7960.5	30	0	930.69	0.214				-1	 	0	72	542.2937991634686	1082.5730453937372	2	542.2957763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13434	4282	17717
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17719	44.223	NaN	5213.2	30	0	1299.8	0.035			+	12215	GARLANHRI	9	48	336.5344378546052	NaN	0	336.5341796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GARLANHRI_	REV__BAZ1B|p.A1298Cfs*10|1|0.16|ENSG00000009954|chr7:73444083-73444084|-/G|frameshift_variant;REV__BAZ1B|p.E800Kfs*16|1|0.08|ENSG00000009954|chr7:73477067-73477067|C/-|frameshift_variant;REV__ENSG00000009954|ENST00000339594|BAZ1B;REV__nc|ENSG00000009954|Q9UIG0-2|BAZ1B	24.20275056022122	0.35506675290109213	6				NaN	NaN	0	NaN	13435	4282	17717
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17725	44.238	NaN	2337.5	30	0	268.41	0.213				-1	ILEIIEGMCY	10	63	600.2887054195292	1198.5628579058582	2	600.2901000976562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ILEIIEGM(Oxidation (M))CY_	ENSG00000137275|ENST00000259808|RIPK1	37.15910966729921	0.575322462179216	6				NaN	NaN	0	NaN	13438	4285	17724
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17726	44.241	NaN	2642.5	30	0	705.98	0.106	+			16920	HPLRSRAF	8	57	492.2801065879225	982.545660242645	2	492.2813720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HPLRSRAF_	ENSG00000158352|ENST00000376020|SHROOM4;nc|ENSG00000158352|Q9ULL8-2|SHROOM4;SHROOM4|p.G1268Rfs*28|1|0.77|ENSG00000158352|chrX:50602774-50602775|-/G|frameshift_variant	38.80614096846853	0.6637206697844082	6				NaN	NaN	0	NaN	13439	4285	17724
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17727	44.243	NaN	1804.3	30	0	152.86	0.106			+	11203	FHRPNEITY	9	68	588.7938232421875	NaN	0	588.7938232421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FHRPNEITY_	REV__ENSG00000197157|ENST00000354725|SND1;REV__GAS2L3-SND1|1|fusion;REV__SND1|p.A514Qfs*156|1|0.37|ENSG00000197157|chr7:127929195-127929195|A/-|frameshift_variant	39.252832667884924	0.27938773122138094	6				NaN	NaN	0	NaN	13440	4285	17724
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17728	44.245	NaN	1222.6	30	0	106.76	0.037	+			21638	KPSVIFGQASH	11	63	585.81494140625	NaN	0	585.81494140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_KPSVIFGQASH_	ENST00000341154.10_1_1:24304473-24304647:-|nuORF	31.634271133179894	0.4244354679066847	6				NaN	NaN	0	NaN	13441	4285	17724
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17737	44.267	NaN	4241.5	30	0	375.02	0.214			+	-1	KCQQLMLK	8	71	524.7869866274829	1047.5594203217656	2	524.7891235351562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_KC(Carbamidomethyl (C))QQLMLK_	REV__ENSG00000104133|ENST00000261866|SPG11;REV__nc|ENSG00000104133|Q96JI7-2|SPG11;REV__nc|ENSG00000104133|Q96JI7-3|SPG11	55.50420428727701	0.5462892107279674	6				NaN	NaN	0	NaN	13447	4288	17736
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17738	44.27	NaN	991.89	30	0	102.72	0.106				-1	 	0	42	356.22458390092146	710.4346148686429	2	356.2255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13448	4288	17736
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17739	44.272	NaN	1042.6	30	0	67.669	0.106	+			47454	VPVLEPQLPG	10	46	350.2066163817449	NaN	0	350.2066955566406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VPVLEPQLPG_	ENSG00000141867|ENST00000679869|BRD4	17.364965105453717	0.4201028297492154	6				NaN	NaN	0	NaN	13449	4288	17736
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17740	44.274	NaN	2859.3	30	0	262.66	0.106				-1	MLTILCEEM	9	68	549.7481637326446	1097.481774532089	2	549.7498168945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_MLTILCEEM(Oxidation (M))_	ENSG00000163867|ENST00000357182|ZMYM6;ENST00000493328.5_1_1:35452707-35454621:-|nuORF;nc|ENSG00000163867|O95789-5|ZMYM6;ZMYM6|p.N1298Ifs*9|1|0.15|ENSG00000163867|chr1:34987189-34987189|T/-|frameshift_variant	33.51558372728122	0.4900267029546261	6				NaN	NaN	0	NaN	13450	4288	17736
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17741	44.276	NaN	1950.3	30	0	236.76	0.106	+			35819	SEASQGFRFL	10	69	571.2863740210926	NaN	0	571.2874145507812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_SEASQGFRFL_	ENSG00000136536|ENST00000409175|MARCHF7;nc|ENSG00000136536|Q9H992-2|MARCHF7	56.43379154798735	0.2634004003759929	6				NaN	NaN	0	NaN	13451	4288	17736
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17742	44.278	NaN	4269.2	30	0	490.79	0.106			+	30408	PVVFDVALS	9	63	316.1803894042969	NaN	0	316.1803894042969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PVVFDVALS_	REV__ALK|p.Q908Rfs*3|1|0.19|ENSG00000171094|chr2:29228977-29228977|G/-|frameshift_variant;REV__ALK|p.R620Mfs*7|1|0.03|ENSG00000171094|chr2:29275455-29275456|-/A|frameshift_variant;REV__ALK|p.W915Gfs*24|1|0.42|ENSG00000171094|chr2:29228957-29228957|C/-|frameshift_variant;REV__ENSG00000171094|ENST00000389048|ALK	19.359975847455235	0.3714571876404798	6				NaN	NaN	0	NaN	13452	4288	17736
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17743	44.279	NaN	1659.5	30	0	473.33	0.032	+			33719	RPGKAGGR	8	37	399.73829604552344	NaN	0	399.73822021484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_RPGKAGGR_	ENST00000531172.5_2_11:17298296-17304356:+|nuORF	4.6817480819748125	1.7418937515398478	6				NaN	NaN	0	NaN	13453	4288	17736
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17747	44.293	NaN	2708.6	30	0	319.57	0.214				-1	 	0	58	495.80118506170305	989.5878171902061	2	495.8030090332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13454	4291	17746
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17748	44.297	NaN	1513.8	30	0	127.24	0.106	+			29195	NVMGEQFSY	9	58	537.7324829101562	NaN	0	537.7324829101562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NVMGEQFSY_	ENSG00000071553|ENST00000369762|ATP6AP1	30.317721548370564	0.32449924987115025	6				NaN	NaN	0	NaN	13455	4291	17746
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17749	44.299	NaN	1749.2	30	0	178.28	0.036			+	30429	PYINRMAFP	9	66	554.7859076929107	NaN	0	554.7898559570312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PYINRMAFP_	REV__ENSG00000236761|ENST00000314099|CTAGE9;REV__ENSG00000271079|ENST00000420911|CTAGE15;REV__ENSG00000271321|ENST00000470691|CTAGE6;REV__nc|ENSG00000288784|Q8IX94|CTAGE4;REV__nc|ENSG00000289604|P0CG41|CTAGE8	50.0245360154114	0.20652386741182333	6				NaN	NaN	0	NaN	13456	4291	17746
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17754	44.314	NaN	7835.2	30	0	412.83	0.214				-1	 	0	84	391.22382613315614	780.4330993331123	2	391.2249755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13458	4294	17753
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17755	44.317	NaN	4428.1	30	0	499.72	0.106	+			26282	LSTRPYSAW	9	68	540.7774295352315	1079.5403061372629	2	540.7791748046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LSTRPYSAW_	ENST00000300107.7_1_15:65445967-65447163:-|nuORF	63.30626980617807	0.18605348971131092	6				NaN	NaN	0	NaN	13459	4294	17753
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17756	44.319	NaN	3074.7	30	0	257.5	0.106			+	-1	NMSSRESPLK	10	74	582.7877860269435	1163.561019120687	2	582.790283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_NM(Oxidation (M))SSRESPLK_	REV__ENST00000332995.11_1_6:13283711-13286435:+|nuORF	42.86426827375447	0.522752283233888	6				NaN	NaN	0	NaN	13460	4294	17753
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17757	44.321	NaN	2092.6	30	0	289.91	0.106			+	1782	AIDLFNVLAG	10	60	516.7908833871018	1031.5672138410034	2	516.7930297851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AIDLFNVLAG_	REV__ENSG00000146039|ENST00000377905|SLC17A4;REV__nc|ENSG00000146039|Q9Y2C5-2|SLC17A4;REV__nc|ENSG00000146039|Q9Y2C5-3|SLC17A4;REV__nc|ENSG00000146039|Q9Y2C5-4|SLC17A4	42.396135135203025	0.5270658956260207	6				NaN	NaN	0	NaN	13461	4294	17753
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17758	44.323	NaN	2130.6	30	0	215.67	0.106			+	15851	GWWRKQDE	8	59	552.7686343114544	NaN	0	552.7682495117188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GWWRKQDE_	REV__ENST00000538118.5_1_12:25047396-25055084:-|nuORF	38.80614096846853	1.7418937515398478	6				NaN	NaN	0	NaN	13462	4294	17753
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17759	44.324	NaN	1052.1	30	0	106.96	0.034	+			50999	YISNATHM	8	53	468.7140808105469	NaN	0	468.7140808105469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YISNATHM_	ENSG00000038382|ENST00000344204|TRIO;nc|ENSG00000038382|O75962-2|TRIO;nc|ENSG00000038382|O75962-4|TRIO;nc|ENSG00000038382|O75962-5|TRIO;TRIO|p.E1028Rfs*29|1|0.41|ENSG00000038382|chr5:14369389-14369389|G/-|frameshift_variant;TRIO|p.K1219Nfs*43|2|0.16|ENSG00000038382|chr5:14387518-14387518|A/-|frameshift_variant;TRIO|p.V2351Cfs*62|3|0.3|ENSG00000038382|chr5:14487672-14487672|C/-|frameshift_variant	33.51558372728122	1.7418937515398478	6				NaN	NaN	0	NaN	13463	4294	17753
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17763	44.338	NaN	935.69	30	0	53.551	0.141			+	12167	GALGLMLDI	9	53	451.75421152072965	NaN	0	451.7530822753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GALGLMLDI_	REV__ENSG00000119457|ENST00000374228|SLC46A2	31.954861631926434	0.3162336699109506	6				NaN	NaN	0	NaN	13464	4297	17762
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17769	44.355	NaN	2331.8	30	0	139	0.214	+			23262	KYIWCLDY	8	61	580.7756815671254	1159.5368102010507	2	580.777587890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_KYIWC(Carbamidomethyl (C))LDY_	ENSG00000196663|ENST00000359520|TECPR2;nc|ENSG00000196663|O15040-2|TECPR2	57.81127852772723	0.5234495074909924	6				NaN	NaN	0	NaN	13467	4300	17768
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17770	44.359	NaN	4239.9	30	0	1396.2	0.106	+			51523	YVTRLGNAEP	10	64	560.2938048935074	1118.5730568538147	2	560.2959594726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YVTRLGNAEP_	ENST00000343200.9_2_5:82767617-82767806:+|nuORF	41.42661286455405	0.5359995577334734	6				NaN	NaN	0	NaN	13468	4300	17768
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17771	44.361	NaN	2031.4	30	0	149.64	0.106				-1	KMNEIMDKL	9	65	569.2862669110476	1136.5579808888951	2	569.2887573242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_KM(Oxidation (M))NEIMDKL_	ENSG00000107949|ENST00000278100|BCCIP	37.81151784470057	0.4459294069877048	6				NaN	NaN	0	NaN	13469	4300	17768
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17772	44.363	NaN	1701.2	30	0	165.61	0.034	+			29539	PEKQGEIE	8	48	465.2326940199095	NaN	0	465.2317810058594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PEKQGEIE_	DMD|p.K2329Sfs*9|1|0.33|ENSG00000198947|chrX:31875300-31875300|T/-|frameshift_variant;DMD|p.L3485*|2|0.35|ENSG00000198947|chrX:31169543-31169543|G/-|frameshift_variant;ENSG00000198947|ENST00000357033|DMD;nc|ENSG00000198947|P11532-11|DMD;nc|ENSG00000198947|P11532-2|DMD;nc|ENSG00000198947|P11532-3|DMD;nc|ENSG00000198947|P11532-4|DMD;nc|ENSG00000198947|P11532|DMD	25.450171626174864	1.7418937515398478	6				NaN	NaN	0	NaN	13470	4300	17768
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17782	44.384	NaN	5725.5	30	0	1461.6	0.214				-1	LFFWVARM	8	68	543.2836652830835	1084.5527776329668	2	543.2857666015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LFFWVARM(Oxidation (M))_	ENSG00000204394|ENST00000375663|VARS1	44.53106598305862	0.628196326904373	6				NaN	NaN	0	NaN	13477	4303	17781
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17783	44.388	NaN	2811.4	30	0	319.59	0.106			+	47715	VSFLLTRTS	9	66	512.2955870094402	1022.5766210856804	2	512.296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VSFLLTRTS_	REV__ENST00000510052.5_1_5:10227758-10236674:-|nuORF;REV__ENST00000511437.5_3_5:10227758-10236627:-|nuORF	40.05817265558897	0.419577045485086	6				NaN	NaN	0	NaN	13478	4303	17781
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17784	44.39	NaN	2167.5	30	0	179.1	0.106	+			15571	GVGKKFYEI	9	66	520.793100811242	NaN	0	520.7928466796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GVGKKFYEI_	tr|U7SVL2|U7SVL2_FUSNUDNApolymeraseIVOS=FusobacteriumnucleatumCTI-5OX=1316586GN=dinBPE=3SV=1	56.72105179125745	0.16330365735109603	6				NaN	NaN	0	NaN	13479	4303	17781
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17785	44.392	NaN	1104.9	30	0	50.239	0.106	+			23484	LAFLLTPGAGT	11	40	354.20650480246314	NaN	0	354.20660400390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LAFLLTPGAGT_	ENSG00000100450|ENST00000216338|GZMH;nc|ENSG00000100450|P20718-2|GZMH;nc|ENSG00000100450|P20718-3|GZMH	20.94693142431847	0.456735970842152	6				NaN	NaN	0	NaN	13480	4303	17781
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17786	44.394	NaN	1300	30	0	130.39	0.036			+	50171	WLDLIHSMV	9	56	557.29248046875	NaN	0	557.29248046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_WLDLIHSMV_	REV__ENST00000240093.7_1_8:28378239-28384707:+|nuORF	24.20275056022122	0.35506675290109213	6				NaN	NaN	0	NaN	13481	4303	17781
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17790	44.408	NaN	3117.1	30	0	725.86	0.214			+	27918	MTYVKKGYK	9	51	373.20987774270935	NaN	0	373.2098083496094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MTYVKKGYK_	REV__tr|U7SKZ9|U7SKZ9_FUSNUABCtransporterATP-bindingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02010PE=4SV=1	26.69291269510374	0.34280015626154364	6				NaN	NaN	0	NaN	13482	4306	17789
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17791	44.411	NaN	2873.2	30	0	204.01	0.106	+			21110	KKREELKGN	9	62	551.322582841128	1100.630612749056	2	551.3244018554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KKREELKGN_	tr|U7SQU4|U7SQU4_FUSNUFlagellarproteinFliTOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01800PE=4SV=1	27.882242232435846	0.5426732730940306	6				NaN	NaN	0	NaN	13483	4306	17789
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17792	44.413	NaN	2123.3	30	0	176.74	0.106	+			9893	EQLMHIYSQ	9	65	574.7735809069524	1147.5326088807046	2	574.7749633789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EQLMHIYSQ_	ENSG00000144369|ENST00000304698|FAM171B	31.529811441608018	0.5085848003137583	6				NaN	NaN	0	NaN	13484	4306	17789
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17793	44.415	NaN	1319.5	30	0	134.37	0.106				-1	IITMFFPI	8	53	499.27489903209903	NaN	0	499.2742004394531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_IITM(Oxidation (M))FFPI_	PM20D2|p.K289Rfs*46|2|0.18|ENSG00000146281|chr6:89154852-89154852|A/-|frameshift_variant	28.2542754592877	1.7418937515398478	6				NaN	NaN	0	NaN	13485	4306	17789
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17794	44.417	NaN	1085.1	30	0	104.74	0.033				-1	 	0	55	435.2499397185046	868.4853265038092	2	435.2510070800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13486	4306	17789
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17800	44.433	NaN	7555.9	30	0	715.68	0.214	+			37676	SLRTFERT	8	66	505.27527600982097	1008.535999086442	2	505.27655029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLRTFERT_	ENST00000374206.3_1_9:116029682-116034747:-|nuORF	64.20726635412375	0.4601301477144759	6				NaN	NaN	0	NaN	13489	4309	17799
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17801	44.437	NaN	1613.5	30	0	119.34	0.106			+	-1	LPAPKYGNSMM	11	63	612.7908742300134	1223.5671955268267	2	612.7925415039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LPAPKYGNSMM(Oxidation (M))_	REV__ENSG00000196218|ENST00000359596|RYR1;REV__ENSG00000198838|ENST00000634891|RYR3;REV__nc|ENSG00000196218|P21817-2|RYR1;REV__nc|ENSG00000196218|P21817-3|RYR1;REV__nc|ENSG00000198838|Q15413-2|RYR3;REV__nc|ENSG00000198838|Q15413-3|RYR3;REV__RYR1|p.C1268Afs*4|1|0.14|ENSG00000196218|chr19:38473407-38473407|C/-|frameshift_variant;REV__RYR1|p.D2713Tfs*33|1|0.11|ENSG00000196218|chr19:38504811-38504811|C/-|frameshift_variant;REV__RYR1|p.P3303Tfs*8|1|0.36|ENSG00000196218|chr19:38517571-38517572|-/C|frameshift_variant;REV__RYR3|p.E2211Qfs*84|1|0.14|ENSG00000198838|chr15:33722725-33722726|-/CA|frameshift_variant;REV__RYR3|p.E3943Rfs*18|1|0.12|ENSG00000198838|chr15:33837800-33837801|-/A|frameshift_variant;REV__RYR3|p.G2237Efs*57|1|0.42|ENSG00000198838|chr15:33722800-33722800|G/-|frameshift_variant;REV__RYR3|p.N4580Mfs*8|1|0.37|ENSG00000198838|chr15:33853618-33853618|A/-|frameshift_variant	37.81151784470057	0.5878881669006212	6				NaN	NaN	0	NaN	13490	4309	17799
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17802	44.439	NaN	1626.7	30	0	170.2	0.035			+	7874	DRKLVFSL	8	54	489.29302978515625	NaN	0	489.29302978515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DRKLVFSL_	REV__ENST00000464491.5_1_2:172180836-172182590:-|nuORF	44.116797842482775	1.7418937515398478	6				NaN	NaN	0	NaN	13491	4309	17799
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17813	44.462	NaN	6718.9	30	0	2721	0.214			+	50322	WTHRPRNP	8	70	532.2809956667074	1062.5474384002148	2	532.282958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_WTHRPRNP_	REV__ENSG00000129038|ENST00000261921|LOXL1;REV__ENST00000566011.5_1_15:74234368-74244175:+|nuORF	26.79610172149135	0.7524337208463756	6				NaN	NaN	0	NaN	13499	4312	17812
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17814	44.466	NaN	2897.7	30	0	395.62	0.106			+	24932	LKSTSHLKL	9	58	513.8176322912047	1025.6207116492094	2	513.819091796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LKSTSHLKL_	REV__ENST00000258991.7_1_17:62225146-62225452:-|nuORF	37.81151784470057	0.4459294069877048	6				NaN	NaN	0	NaN	13500	4312	17812
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17815	44.468	NaN	1490.7	30	0	174.21	0.106			+	14028	GSGALLAP	8	49	343.19766570240824	NaN	0	343.19769287109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GSGALLAP_	REV__ENST00000415212.1_1_10:89578218-89578669:+|nuORF	37.028477286268924	1.7418937515398478	6				NaN	NaN	0	NaN	13501	4312	17812
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17816	44.469	NaN	2482.2	30	0	505.97	0.106	+			51430	YVACALLVF	9	57	499.77218432106014	997.5298157089203	2	499.7746276855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YVACALLVF_	ENSG00000174233|ENST00000357869|ADCY6;ENST00000552090.1_1_12:49167835-49170266:-|nuORF;nc|ENSG00000174233|O43306-2|ADCY6	60.403631409065575	0.21025000616765316	6				NaN	NaN	0	NaN	13502	4312	17812
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17817	44.471	NaN	2272.2	30	0	551.78	0.034			+	34123	RSSLSVVVL	9	52	480.29833049843995	958.5821080636799	2	480.2994079589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RSSLSVVVL_	REV__ENSG00000236320|ENST00000674182|SLFN14;REV__nc|ENSG00000236320|P0C7P3-2|SLFN14	32.81241826257853	0.4965981579233955	6				NaN	NaN	0	NaN	13503	4312	17812
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17824	44.489	NaN	1733.6	30	0	179.82	0.214			+	29888	PLLLRSSL	8	57	449.7895047348657	NaN	0	449.78948974609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PLLLRSSL_	REV__ENST00000380345.6_1_5:77944382-77944556:-|nuORF	38.80614096846853	1.7418937515398478	6				NaN	NaN	0	NaN	13507	4315	17823
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17825	44.493	NaN	2397.9	30	0	224.19	0.035			+	43738	TLAINPGLPF	10	60	521.7979472036423	1041.5813414740844	2	521.8004150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TLAINPGLPF_	REV__ENST00000370982.3_1_1:68169747-68169855:-|nuORF	40.77816245573522	0.5419747034533848	6				NaN	NaN	0	NaN	13508	4315	17823
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17832	44.511	NaN	3289.3	30	0	291.51	0.214	+			6061	AVMNFVVRY	9	68	549.7896938014959	1097.5648346697917	2	549.791015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVMNFVVRY_	ENSG00000106397|ENST00000223127|PLOD3	66.42927471994793	0.16001998865088202	6				NaN	NaN	0	NaN	13512	4318	17831
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17833	44.514	NaN	2782.9	30	0	158.49	0.035			+	8732	EEERLIFI	8	66	524.7869866274829	1047.5594203217656	2	525.7842407226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EEERLIFI_	REV__ENSG00000155026|ENST00000404406|RSPH10B;REV__ENSG00000169402|ENST00000404077|RSPH10B2	26.79610172149135	0.7524337208463756	6				NaN	NaN	0	NaN	13513	4318	17831
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17841	44.534	NaN	1592.7	30	0	179.71	0.214			+	31954	QQRRLVAI	8	58	492.3088302943959	982.6031076555918	2	492.3101806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QQRRLVAI_	REV__ATF6|p.N316Ifs*17|1|0.21|ENSG00000118217|chr1:161819665-161819665|A/-|frameshift_variant;REV__ENSG00000118217|ENST00000367942|ATF6;REV__ENST00000251241.8_1_17:57648007-57650495:+|nuORF	44.53106598305862	0.628196326904373	6				NaN	NaN	0	NaN	13518	4321	17840
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17842	44.538	NaN	1835.9	30	0	163.9	0.106	+			36492	SEWVSCVRF	9	71	585.2738104509605	NaN	0	585.2735595703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_SEWVSC(Carbamidomethyl (C))VRF_	ENSG00000204628|ENST00000512805|RACK1;ENST00000502548.5_1_5:180666387-180669331:-|nuORF;ENST00000514183.5_1_5:180665952-180670713:-|nuORF;ENST00000515417.5_1_5:180666387-180668514:-|nuORF	60.11826168202944	0.14881452885248947	6				NaN	NaN	0	NaN	13519	4321	17840
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17843	44.54	NaN	2803.9	30	0	319.68	0.106			+	11444	FMHICDNVIT	10	70	604.7750768326017	1207.5356007320033	2	604.7766723632812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_FM(Oxidation (M))HICDNVIT_	REV__ENSG00000156017|ENST00000376834|CARNMT1	56.72105179125745	0.3956618550748046	6				NaN	NaN	0	NaN	13520	4321	17840
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17844	44.542	NaN	677.75	30	0	38.747	0.03			+	46681	VGGVAGLA	8	36	322.1934814453125	NaN	0	322.1934814453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VGGVAGLA_	REV__ENSG00000241935|ENST00000370646|HOGA1;REV__HOGA1|p.F283Lfs*31|1|0.08|ENSG00000241935|chr10:97611520-97611521|-/A|frameshift_variant	16.704963439144045	1.7418937515398478	6				NaN	NaN	0	NaN	13521	4321	17840
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17854	44.563	NaN	4317.2	30	0	902.38	0.214			+	3200	ASKKIEGKF	9	40	336.5344378546052	NaN	0	336.5343933105469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASKKIEGKF_	REV__tr|U7SUA5|U7SUA5_FUSNUOligopeptidaseFOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01160PE=3SV=1	44.116797842482775	0.2472372736944149	6				NaN	NaN	0	NaN	13528	4324	17853
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17855	44.567	NaN	2443.8	30	0	248.2	0.035	+			26917	LYDPVISKL	9	63	524.3082766728045	NaN	0	524.3091430664062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LYDPVISKL_	ENSG00000187778|ENST00000343810|MCRS1;nc|ENSG00000187778|Q96EZ8-2|MCRS1;nc|ENSG00000187778|Q96EZ8-3|MCRS1	47.657333605630114	0.2228375344433429	6				NaN	NaN	0	NaN	13529	4324	17853
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17865	44.589	NaN	2292.2	30	0	218.44	0.214	+			39145	SSVILFLNK	9	52	510.8062204255414	1019.5978879178829	2	510.8078918457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSVILFLNK_	ENSG00000088256|ENST00000078429|GNA11;ENSG00000156049|ENST00000341700|GNA14;ENSG00000156052|ENST00000286548|GNAQ;ENST00000586180.1_1_19:3118803-3121174:+|nuORF;ENST00000590534.1_1_19:3119101-3121174:+|nuORF	58.78195531508484	0.22376836668196862	6				NaN	NaN	0	NaN	13536	4327	17864
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17866	44.593	NaN	2661.4	30	0	238.23	0.106	+			35753	SDTVIWNEVH	10	61	600.2887054195292	1198.5628579058582	2	600.290771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SDTVIWNEVH_	ENSG00000110042|ENST00000227451|DTX4;nc|ENSG00000110042|Q9Y2E6-2|DTX4	30.317721548370564	0.6322445173429027	6				NaN	NaN	0	NaN	13537	4327	17864
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17867	44.595	NaN	2246.4	30	0	216.58	0.106			+	25240	LNGKFIRR	8	62	502.311272832348	1002.607992731496	2	502.3122863769531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LNGKFIRR_	REV__SMIM21|p.G28R|1|0.31|ENSG00000206026|chr18:75427482-75427482|C/T|missense_variant	35.200714571348534	0.6875396545722289	6				NaN	NaN	0	NaN	13538	4327	17864
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17868	44.596	NaN	1544.1	30	0	220.09	0.106	+			13570	GLTISSLLK	9	58	466.2945556640625	NaN	0	466.2945556640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GLTISSLLK_	ENSG00000141252|ENST00000437048|VPS53;ENST00000572607.1_1_17:454958-465900:-|nuORF;nc|ENSG00000141252|Q5VIR6-1|VPS53;nc|ENSG00000141252|Q5VIR6-2|VPS53;nc|ENSG00000141252|Q5VIR6-3|VPS53	30.317721548370564	0.32449924987115025	6				NaN	NaN	0	NaN	13539	4327	17864
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17869	44.598	NaN	1769.8	30	0	149.63	0.106	+			43629	TIPEQIQSL	9	57	514.7838745117188	NaN	0	514.7838745117188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TIPEQIQSL_	ENSG00000198648|ENST00000355999|STK39;ENST00000487143.5_1_2:168812008-168969496:-|nuORF;nc|ENSG00000198648|Q9UEW8-2|STK39	56.43379154798735	0.16452882468284893	6				NaN	NaN	0	NaN	13540	4327	17864
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17870	44.6	NaN	2880	30	0	167.11	0.036	+			27061	MADPNIRFL	9	67	538.7802313003652	1075.5459096675304	2	538.7819213867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_MADPNIRFL_	ENSG00000184584|ENST00000330794|STING1;ENST00000507297.5_1_5:138855848-138858268:-|nuORF;ENST00000509573.5_1_5:138855949-138860944:-|nuORF	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	13541	4327	17864
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17886	44.64	NaN	3494.8	30	0	740.12	0.214	+			4317	ATGKRFYFK	9	53	373.20987774270935	NaN	0	373.209716796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATGKRFYFK_	CLCA1|p.N76_V77insLLF|1|0.06|ENSG00000016490|chr1:86473481-86473482|-/CTTGTTATT|inframe_insertion;CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	37.15910966729921	0.2899585034171616	6				NaN	NaN	0	NaN	13551	4333	17885
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17887	44.643	NaN	2742.5	30	0	162.57	0.106				-1	 	0	57	495.80118506170305	989.5878171902061	2	495.8025817871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13552	4333	17885
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17888	44.645	NaN	1597.4	30	0	85.161	0.106	+			28599	NKPIIAVFE	9	62	515.8008394929824	NaN	0	515.800537109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_NKPIIAVFE_	ENSG00000135905|ENST00000258390|DOCK10;nc|ENSG00000135905|Q96BY6-3|DOCK10	53.351449002276354	0.18359631779194618	6				NaN	NaN	0	NaN	13553	4333	17885
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17889	44.647	NaN	1925	30	0	292.46	0.106			+	-1	CACVCVCVCL	10	65	565.2196702607798	NaN	0	565.2198486328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_CACVCVC(Carbamidomethyl (C))VC(Carbamidomethyl (C))L_	REV__ENST00000568620.5_1_16:67472156-67472426:-|nuORF	35.200714571348534	0.3845941098745963	6				NaN	NaN	0	NaN	13554	4333	17885
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17890	44.649	NaN	1928.1	30	0	223.46	0.036			+	-1	YVLCKYPR	8	62	549.7896938014959	1097.5648346697917	2	550.2926025390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_YVLC(Carbamidomethyl (C))KYPR_	REV__ZNF500|p.C358Y|1|0.28|ENSG00000103199|chr16:4752746-4752746|C/T|missense_variant	37.028477286268924	0.6747514403204248	6				NaN	NaN	0	NaN	13555	4333	17885
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17895	44.663	NaN	5572.2	30	0	369.23	0.214				-1	 	0	74	391.22382613315614	780.4330993331123	2	391.2249755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13557	4336	17894
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17896	44.667	NaN	6847.1	30	0	859.3	0.106	+			46056	VCGQERTSATL	11	74	582.7877860269435	1163.561019120687	2	582.7894287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VCGQERTSATL_	ENSG00000154358|ENST00000680850|OBSCN;ENSG00000154358|ENST00000680850|OBSCN;ENSG00000154358|ENST00000680850|OBSCN;ENSG00000154358|ENST00000680850|OBSCN;ENSG00000154358|ENST00000680850|OBSCN;ENSG00000154358|ENST00000680850|OBSCN;ENST00000494839.1_1_1:228481917-228482770:+|nuORF;ENST00000494839.1_1_1:228481917-228482770:+|nuORF;nc|ENSG00000154358|Q5VST9-2|OBSCN;nc|ENSG00000154358|Q5VST9-2|OBSCN;nc|ENSG00000154358|Q5VST9-2|OBSCN;nc|ENSG00000154358|Q5VST9-3|OBSCN;nc|ENSG00000154358|Q5VST9-3|OBSCN;nc|ENSG00000154358|Q5VST9-3|OBSCN;nc|ENSG00000154358|Q5VST9-5|OBSCN;nc|ENSG00000154358|Q5VST9-5|OBSCN;nc|ENSG00000154358|Q5VST9-5|OBSCN;nc|ENSG00000154358|Q5VST9-6|OBSCN;nc|ENSG00000154358|Q5VST9-6|OBSCN;nc|ENSG00000154358|Q5VST9-6|OBSCN;nc|ENSG00000154358|Q5VST9-6|OBSCN;nc|ENSG00000154358|Q5VST9-6|OBSCN;nc|ENSG00000154358|Q5VST9-6|OBSCN;nc|ENSG00000154358|Q5VST9|OBSCN;nc|ENSG00000154358|Q5VST9|OBSCN;nc|ENSG00000154358|Q5VST9|OBSCN;OBSCN|p.E4688Dfs*35|1|0.03|ENSG00000154358|chr1:228318105-228318106|-/CATCTTC|frameshift_variant;OBSCN|p.E4688Dfs*35|1|0.03|ENSG00000154358|chr1:228318105-228318106|-/CATCTTC|frameshift_variant;OBSCN|p.E4688Dfs*35|1|0.03|ENSG00000154358|chr1:228318105-228318106|-/CATCTTC|frameshift_variant;OBSCN|p.E4688Dfs*35|1|0.03|ENSG00000154358|chr1:228318105-228318106|-/CATCTTC|frameshift_variant;OBSCN|p.E4688Dfs*35|1|0.03|ENSG00000154358|chr1:228318105-228318106|-/CATCTTC|frameshift_variant;OBSCN|p.E4688Dfs*35|1|0.03|ENSG00000154358|chr1:228318105-228318106|-/CATCTTC|frameshift_variant;OBSCN|p.E4729Rfs*7|1|0.37|ENSG00000154358|chr1:228318930-228318931|-/C|frameshift_variant;OBSCN|p.E4729Rfs*7|1|0.37|ENSG00000154358|chr1:228318930-228318931|-/C|frameshift_variant;OBSCN|p.E4729Rfs*7|1|0.37|ENSG00000154358|chr1:228318930-228318931|-/C|frameshift_variant;OBSCN|p.E4729Rfs*7|1|0.37|ENSG00000154358|chr1:228318930-228318931|-/C|frameshift_variant;OBSCN|p.E4729Rfs*7|1|0.37|ENSG00000154358|chr1:228318930-228318931|-/C|frameshift_variant;OBSCN|p.E4729Rfs*7|1|0.37|ENSG00000154358|chr1:228318930-228318931|-/C|frameshift_variant;OBSCN|p.H7050Tfs*22|1|0.11|ENSG00000154358|chr1:228371922-228371922|C/-|frameshift_variant;OBSCN|p.H7050Tfs*22|1|0.11|ENSG00000154358|chr1:228371922-228371922|C/-|frameshift_variant;OBSCN|p.H7050Tfs*22|1|0.11|ENSG00000154358|chr1:228371922-228371922|C/-|frameshift_variant;OBSCN|p.H7050Tfs*22|1|0.11|ENSG00000154358|chr1:228371922-228371922|C/-|frameshift_variant;OBSCN|p.H7050Tfs*22|1|0.11|ENSG00000154358|chr1:228371922-228371922|C/-|frameshift_variant;OBSCN|p.H7050Tfs*22|1|0.11|ENSG00000154358|chr1:228371922-228371922|C/-|frameshift_variant;OBSCN|p.P6994Lfs*78|1|0.15|ENSG00000154358|chr1:228371756-228371756|C/-|frameshift_variant;OBSCN|p.P6994Lfs*78|1|0.15|ENSG00000154358|chr1:228371756-228371756|C/-|frameshift_variant;OBSCN|p.P6994Lfs*78|1|0.15|ENSG00000154358|chr1:228371756-228371756|C/-|frameshift_variant;OBSCN|p.P6994Lfs*78|1|0.15|ENSG00000154358|chr1:228371756-228371756|C/-|frameshift_variant;OBSCN|p.P6994Lfs*78|1|0.15|ENSG00000154358|chr1:228371756-228371756|C/-|frameshift_variant;OBSCN|p.P6994Lfs*78|1|0.15|ENSG00000154358|chr1:228371756-228371756|C/-|frameshift_variant;OBSCN|p.S5232Ffs*24|1|0.21|ENSG00000154358|chr1:228332900-228332901|-/T|frameshift_variant;OBSCN|p.S5232Ffs*24|1|0.21|ENSG00000154358|chr1:228332900-228332901|-/T|frameshift_variant;OBSCN|p.S5232Ffs*24|1|0.21|ENSG00000154358|chr1:228332900-228332901|-/T|frameshift_variant;OBSCN|p.S5232Ffs*24|1|0.21|ENSG00000154358|chr1:228332900-228332901|-/T|frameshift_variant;OBSCN|p.S5232Ffs*24|1|0.21|ENSG00000154358|chr1:228332900-228332901|-/T|frameshift_variant;OBSCN|p.S5232Ffs*24|1|0.21|ENSG00000154358|chr1:228332900-228332901|-/T|frameshift_variant;OBSCN|p.V3709Sfs*15|1|0.03|ENSG00000154358|chr1:228293609-228293610|-/A|frameshift_variant	35.15202426646627	0.6210751305041943	6				NaN	NaN	0	NaN	13558	4336	17894
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17897	44.669	NaN	2985.4	30	0	239.18	0.106	+			9737	ENASLREKL	9	64	530.2938085341793	1058.5730641351586	2	530.2955322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ENASLREKL_	ENSG00000169683|ENST00000306688|LRRC45	61.691277971877994	0.19951612995419254	6				NaN	NaN	0	NaN	13559	4336	17894
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17898	44.671	NaN	1828.3	30	0	472.02	0.106	+			11070	FETAMRLL	8	65	490.76503786271616	NaN	0	490.76519775390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FETAMRLL_	ENSG00000122218|ENST00000241704|COPA;nc|ENSG00000122218|P53621-2|COPA	35.61828744233558	1.7418937515398478	6				NaN	NaN	0	NaN	13560	4336	17894
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17899	44.673	NaN	1809	30	0	126.97	0.035	+			46710	VGLNVFLEK	9	56	509.79835042218025	1017.5821479111605	2	510.301513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VGLNVFLEK_	ENSG00000153037|ENST00000505459|SRP19;ENST00000512790.5_1_5:112197073-112227301:+|nuORF;nc|ENSG00000153037|P09132-2|SRP19	42.33807565288922	0.3928346960664841	6				NaN	NaN	0	NaN	13561	4336	17894
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17904	44.687	NaN	3361.6	30	0	228.6	0.214			+	-1	ICWCFVFL	8	58	544.2582793127625	1086.502005692325	2	544.2609252929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_ICWC(Carbamidomethyl (C))FVFL_	REV__L1PA6_dup546|chr2:49227587-49231532:-|4.547726375381561|0.2927699401366612|3.96|483.0|226|3|anti-sense	43.626045697637714	0.6338121648150432	6				NaN	NaN	0	NaN	13563	4339	17903
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17905	44.691	NaN	2944.6	30	0	405.55	0.106	+			42075	SYDTITVHW	9	71	561.2669647298542	NaN	0	561.2671508789062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SYDTITVHW_	ENSG00000101871|ENST00000317552|MID1;nc|ENSG00000101871|O15344-2|MID1	45.9519527083369	0.2345902329052062	6				NaN	NaN	0	NaN	13564	4339	17903
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17906	44.693	NaN	1779.5	30	0	346.14	0.036				-1	KVYMNQVCD	9	62	558.2469482421875	NaN	0	558.2469482421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_KVYM(Oxidation (M))NQVCD_	ENSG00000102401|ENST00000471229|ARMCX3	21.9598887501803	0.3626577482100488	6				NaN	NaN	0	NaN	13565	4339	17903
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17914	44.711	NaN	2311.9	30	0	221.15	0.214			+	21513	KNNVLTVTR	9	68	522.8121153082017	1043.6096776832032	2	522.8138427734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KNNVLTVTR_	REV__ENST00000393085.3_1_7:135613116-135613200:-|nuORF	33.921630207806714	0.48623198279849766	6				NaN	NaN	0	NaN	13570	4342	17913
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17915	44.714	NaN	1604.8	30	0	143.44	0.035				-1	 	0	60	514.8197217166802	1027.6248905001603	2	514.8218383789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13571	4342	17913
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17922	44.731	NaN	2757.3	30	0	351.92	0.144			+	10425	EVISVNDECL	10	69	560.7638549804688	NaN	0	560.7638549804688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EVISVNDECL_	REV__ENST00000418919.6_1_12:65115387-65115435:-|nuORF	30.317721548370564	0.4006274431774794	6				NaN	NaN	0	NaN	13575	4345	17921
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17926	44.747	NaN	3330.6	30	0	155.94	0.214				-1	 	0	62	413.2369631148472	824.4593732964944	2	413.2380065917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13576	4348	17925
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17927	44.751	NaN	2214.9	30	0	157.54	0.106	+			23614	LAPLRGVSSAP	11	68	534.3147959335075	1066.615038933815	2	534.3164672851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LAPLRGVSSAP_	ENST00000569248.5_1_16:730510-731029:+|nuORF	27.047317107675042	0.7060868989289394	6				NaN	NaN	0	NaN	13577	4348	17925
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17928	44.753	NaN	1377.4	30	0	133.02	0.03				-1	 	0	42	328.7045905258189	NaN	0	328.70428466796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13578	4348	17925
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17935	44.769	NaN	2533.3	30	0	113.88	0.214				-1	 	0	62	435.2499397185046	868.4853265038092	2	435.2510070800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13582	4351	17934
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17936	44.772	NaN	1354	30	0	111.2	0.106				-1	 	0	41	338.1924724811021	674.3703920290042	2	338.1936340332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13583	4351	17934
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17937	44.774	NaN	3072	30	0	386.54	0.106			+	46589	VFPSASSKIL	10	71	524.8066482620192	NaN	0	524.8062744140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VFPSASSKIL_	REV__ENST00000375664.8_2_10:28908866-28909124:+|nuORF	51.19269402634007	0.2980620950593832	6				NaN	NaN	0	NaN	13584	4351	17934
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17938	44.776	NaN	1249.4	30	0	139.27	0.034	+			10719	FADGFVKAL	9	52	484.26616559416783	NaN	0	484.26556396484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FADGFVKAL_	ENSG00000171223|ENST00000302754|JUNB	51.19269402634007	0.19847346126499396	6				NaN	NaN	0	NaN	13585	4351	17934
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17944	44.792	NaN	4062.4	30	0	306.47	0.214	+			34068	RSPELLVGDT	10	76	543.7937756228505	1085.5729983125009	2	543.795654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RSPELLVGDT_	ENSG00000100490|ENST00000395834|CDKL1;nc|ENSG00000100490|Q00532-2|CDKL1;nc|ENSG00000100490|Q00532-3|CDKL1	69.6276240434122	0.2803623802747859	6				NaN	NaN	0	NaN	13588	4354	17943
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17945	44.796	NaN	3409.4	30	0	541.37	0.106			+	1098	AELFLAPKK	9	73	508.8093160780143	1015.6040792228287	2	508.8109436035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AELFLAPKK_	REV__ENSG00000150776|ENST00000393047|NKAPD1;REV__nc|ENSG00000150776|Q6ZUT1-3|NKAPD1;REV__nc|ENSG00000150776|Q6ZUT1|NKAPD1	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	13589	4354	17943
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17946	44.798	NaN	2267.5	30	0	216.1	0.106	+			10714	FAATSAKASR	10	65	505.27527600982097	1008.535999086442	2	505.27685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FAATSAKASR_	ENST00000381782.6_2_4:40751996-40752257:+|nuORF	40.77816245573522	0.5419747034533848	6				NaN	NaN	0	NaN	13590	4354	17943
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17947	44.8	NaN	1737.9	30	0	365.23	0.036			+	11773	FSLNAPSDRI	10	67	560.2962786962447	NaN	0	560.29638671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FSLNAPSDRI_	REV__CD300A|p.T141Dfs*32|1|0.04|ENSG00000167851|chr17:74474569-74474570|-/A|frameshift_variant;REV__ENSG00000167850|ENST00000330793|CD300C;REV__ENSG00000167851|ENST00000360141|CD300A;REV__ENST00000582319.5_1_17:72462842-72477477:+|nuORF	35.15202426646627	0.38475398474706135	6				NaN	NaN	0	NaN	13591	4354	17943
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17955	44.819	NaN	4804.4	30	0	1150.4	0.214			+	7004	CRPGMSFLK	9	72	556.2729827380542	1110.5314125429084	2	556.2747802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_C(Carbamidomethyl (C))RPGM(Oxidation (M))SFLK_	REV__ENST00000479836.1_1_1:176762700-176805848:+|nuORF	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	13596	4357	17954
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17956	44.823	NaN	2003.9	30	0	181.79	0.106	+			42433	TALGFVLYK	9	57	506.29583305081024	1010.5771131684205	2	506.2977294921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TALGFVLYK_	ENSG00000189221|ENST00000338702|MAOA;nc|ENSG00000189221|P21397-2|MAOA	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	13597	4357	17954
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17957	44.825	NaN	1224.8	30	0	181.35	0.034	+			11215	FIAQNVASL	9	51	481.768310872574	NaN	0	481.76904296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FIAQNVASL_	ENSG00000127481|ENST00000375254|UBR4;nc|ENSG00000127481|Q5T4S7-2|UBR4;nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000127481|Q5T4S7-4|UBR4;nc|ENSG00000127481|Q5T4S7-5|UBR4;UBR4|p.C4515Wfs*2|1|0.06|ENSG00000127481|chr1:19095626-19095626|G/-|frameshift_variant;UBR4|p.L4771Cfs*7|1|0.25|ENSG00000127481|chr1:19088878-19088878|G/-|frameshift_variant;UBR4|p.P4047Ifs*4|1|0.4|ENSG00000127481|chr1:19106932-19106933|GG/-|frameshift_variant	39.252832667884924	0.27938773122138094	6				NaN	NaN	0	NaN	13598	4357	17954
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17964	44.841	NaN	3409.7	30	0	479.58	0.214	+			50809	YERAIKENL	9	65	568.3070328828297	1134.5995128324594	2	568.8108520507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YERAIKENL_	tr|U7SF08|U7SF08_FUSNUCRISPRtypeIII-a/mtube-associatedproteincsm6OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02349PE=4SV=1	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	13602	4360	17963
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17965	44.845	NaN	1860.1	30	0	101.09	0.106				-1	 	0	58	355.21345570615017	708.4123584791004	2	355.21417236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13603	4360	17963
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17966	44.847	NaN	1733.1	30	0	112.26	0.037	+			50876	YFILILKGY	9	63	565.3339233398438	NaN	0	565.3339233398438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YFILILKGY_	nc|ENSG00000132204|Q9BZP3-3|LINC00470	25.450171626174864	0.34907449758287085	6				NaN	NaN	0	NaN	13604	4360	17963
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17970	44.861	NaN	1916.1	30	0	209.27	0.214	+			12327	GDIDGFQKI	9	65	496.75589714380806	NaN	0	496.7560119628906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GDIDGFQKI_	ENST00000401540.2_1_2:130750765-130751497:+|nuORF	37.81151784470057	0.28666463014928195	6				NaN	NaN	0	NaN	13605	4363	17969
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17971	44.865	NaN	2251.5	30	0	165.6	0.036	+			6697	AYVHMVTHF	9	69	552.7688270829052	NaN	0	552.768798828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AYVHMVTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	47.91560031466742	0.22105767942158736	6				NaN	NaN	0	NaN	13606	4363	17969
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17983	44.89	NaN	3964.3	30	0	196.23	0.214			+	51434	YVAMIPLLF	9	70	533.8044668048045	1065.594380676409	2	533.8062133789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YVAMIPLLF_	REV__nc|ENSG00000179148|Q9BYJ1-2|ALOXE3	60.403631409065575	0.21025000616765316	6				NaN	NaN	0	NaN	13615	4366	17982
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17984	44.894	NaN	2756.3	30	0	477.65	0.106	+			42849	TEFLLMIF	8	63	507.2727867672605	1012.5310206013211	2	507.2742614746094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TEFLLMIF_	CON__Q5D862;ENSG00000143520|ENST00000388718|FLG2;FLG2|p.D1885Afs*43|1|0.04|ENSG00000143520|chr1:152352122-152352132|CACTTCACTGT/-|frameshift_variant;FLG2|p.G1513Afs*23|1|0.04|ENSG00000143520|chr1:152353248-152353248|C/-|frameshift_variant;FLG2|p.S1813*|1|0.04|ENSG00000143520|chr1:152352348-152352348|G/-|frameshift_variant;FLG2|p.V1359Sfs*177|1|0.08|ENSG00000143520|chr1:152353711-152353711|C/-|frameshift_variant	49.21078951299608	0.5991576752473486	6				NaN	NaN	0	NaN	13616	4366	17982
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17985	44.896	NaN	3821.5	30	0	419.89	0.106	+			10610	EYMAQHLVF	9	69	569.2719021391684	1136.5292513451368	2	569.273681640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EYMAQHLVF_	ENSG00000143093|ENST00000369795|STRIP1;ENST00000473429.5_1_1:110591964-110592183:+|nuORF;ENST00000485775.5_1_1:110582506-110596531:+|nuORF;nc|ENSG00000143093|Q5VSL9-2|STRIP1;nc|ENSG00000143093|Q5VSL9-3|STRIP1	68.78682469695295	0.14603441672067394	6				NaN	NaN	0	NaN	13617	4366	17982
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17986	44.897	NaN	2689.7	30	0	266.63	0.106			+	-1	DMLVFSPII	9	68	525.783109093169	NaN	0	525.3069458007812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_DM(Oxidation (M))LVFSPII_	REV__ENSG00000111237|ENST00000549578|VPS29;REV__nc|ENSG00000111237|Q9UBQ0-2|VPS29	47.91560031466742	0.22105767942158736	6				NaN	NaN	0	NaN	13618	4366	17982
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17987	44.899	NaN	1418.7	30	0	160.94	0.106	+			5596	AVAVTAAP	8	43	350.20666932878834	NaN	0	350.2064208984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AVAVTAAP_	ENSG00000244005|ENST00000374092|NFS1;ENST00000421540.1_1_20:34280185-34287249:-|nuORF;nc|ENSG00000244005|Q9Y697-3|NFS1	24.504012794735996	1.7418937515398478	6				NaN	NaN	0	NaN	13619	4366	17982
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17988	44.901	NaN	2720.6	30	0	203.44	0.036	+			16850	HPEPRKGVGE	10	65	553.292724609375	NaN	0	553.292724609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HPEPRKGVGE_	ENST00000459862.1_1_1:205499484-205500503:+|nuORF	44.377184641726394	0.34115073642966565	6				NaN	NaN	0	NaN	13620	4366	17982
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17995	44.919	NaN	2732.8	30	0	190.89	0.214	+			13595	GLVLWAGAFY	10	66	548.7945816887251	1095.57461044425	2	548.7969970703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GLVLWAGAFY_	ENSG00000135587|ENST00000258052|SMPD2	35.200714571348534	0.5923680232273616	6				NaN	NaN	0	NaN	13624	4369	17994
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	17996	44.923	NaN	1923.9	30	0	260.82	0.036	+			2805	ARTTTDNTVL	10	64	546.289025552102	NaN	0	546.2877197265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ARTTTDNTVL_	ENST00000494197.1_1_5:31847735-31848014:+|nuORF	49.536043120802724	0.30853568297719935	6				NaN	NaN	0	NaN	13625	4369	17994
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18003	44.941	NaN	3383.2	30	0	387.25	0.214				-1	 	0	58	502.311272832348	1002.607992731496	2	502.3133544921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13629	4372	18002
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18004	44.944	NaN	5217.9	30	0	618.25	0.106			+	51354	YSYSILKPYK	10	76	631.3431740189906	1260.671795104781	2	631.3450927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YSYSILKPYK_	REV__ENSG00000143819|ENST00000272167|EPHX1	44.377184641726394	0.5088115166961078	6				NaN	NaN	0	NaN	13630	4372	18002
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18005	44.946	NaN	3031.6	30	0	212.05	0.106	+			15592	GVIGQDGLLFK	11	66	573.8281474387538	1145.6417419443076	2	573.8306884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GVIGQDGLLFK_	ENSG00000107371|ENST00000327304|EXOSC3;ENST00000465860.5_1_9:37781981-37784738:-|nuORF	48.601550744091256	0.44024757269956427	6				NaN	NaN	0	NaN	13631	4372	18002
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18006	44.948	NaN	2213.4	30	0	210.39	0.106			+	32125	QSLANQQFTY	10	77	600.2886072681343	1198.5626616030686	2	600.7935180664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_QSLANQQFTY_	REV__ENSG00000105996|ENST00000222718|HOXA2	45.97224482568171	0.49411383603842696	6				NaN	NaN	0	NaN	13632	4372	18002
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18007	44.95	NaN	2032.1	30	0	198.97	0.106	+			12835	GENPFATVKL	10	66	538.2912823983228	1074.5680118634455	2	538.2939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_GENPFATVKL_	ENSG00000006453|ENST00000005260|BAIAP2L1;LMTK2-BAIAP2L1|1|fusion	58.2462437865262	0.38179041844353556	6				NaN	NaN	0	NaN	13633	4372	18002
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18008	44.952	NaN	2000.9	30	0	287.25	0.106	+			21424	KMVSMMEGVI	10	65	562.7782607516326	1123.5419685700651	2	562.780029296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_KMVSMMEGVI_	ENSG00000130396|ENST00000683244|AFDN;nc|ENSG00000130396|P55196-1|AFDN;nc|ENSG00000130396|P55196-2|AFDN;nc|ENSG00000130396|P55196-3|AFDN;nc|ENSG00000130396|P55196-5|AFDN;nc|ENSG00000130396|P55196-6|AFDN;nc|ENSG00000130396|P55196|AFDN	34.172542307311794	0.6007644933930345	6				NaN	NaN	0	NaN	13634	4372	18002
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18009	44.954	NaN	1554.8	30	0	154.65	0.039			+	-1	MKVNKWWFK	9	61	641.8412115542045	1281.667870175209	2	641.8453369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_M(Oxidation (M))KVNKWWFK_	REV__ENSG00000118640|ENST00000263864|VAMP8	45.9519527083369	0.35044536499095585	6				NaN	NaN	0	NaN	13635	4372	18002
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18015	44.968	NaN	3208.1	30	0	2154	0.214				-1	 	0	41	346.70579829108584	691.3970436489717	2	346.7066955566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13638	4375	18014
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18016	44.972	NaN	3649.4	30	0	396.56	0.106				-1	MVYFLILY	8	69	539.2886915555108	1076.5628301778215	2	539.2919311523438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_M(Oxidation (M))VYFLILY_	ENSG00000127364|ENST00000247881|TAS2R4	43.626045697637714	0.6338121648150432	6				NaN	NaN	0	NaN	13639	4375	18014
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18017	44.974	NaN	2142.7	30	0	205.96	0.106	+			555	ADFGLARAF	9	50	484.2524982576034	966.4904435820068	2	484.25299072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ADFGLARAF_	ENSG00000123374|ENST00000266970|CDK2;ENSG00000136807|ENST00000373264|CDK9;ENSG00000164885|ENST00000485972|CDK5;ENSG00000170312|ENST00000395284|CDK1;ENSG00000250506|ENST00000448471|CDK3;ENST00000554619.5_1_12:56361683-56363594:+|nuORF;ENST00000556656.5_1_12:56361683-56365109:+|nuORF;ENST00000567351.5_2_17:73997368-73998786:+|nuORF;nc|ENSG00000123374|P24941-2|CDK2;nc|ENSG00000136807|P50750-2|CDK9;nc|ENSG00000164885|Q00535-2|CDK5	79.71258880314673	0.09879134589249085	6				NaN	NaN	0	NaN	13640	4375	18014
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18018	44.976	NaN	1933	30	0	287.01	0.038			+	23470	LAEQLTENSAL	11	68	594.8065795898438	NaN	0	594.8065795898438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LAEQLTENSAL_	REV__ENSG00000177694|ENST00000454872|NAALADL2	27.047317107675042	0.44487757903053116	6				NaN	NaN	0	NaN	13641	4375	18014
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18026	44.994	NaN	2590.7	30	0	214.65	0.214				-1	 	0	54	360.20550611250553	718.3964592918111	2	360.2061767578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13646	4378	18025
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18027	44.998	NaN	1868.3	30	0	400.58	0.106			+	-1	MMGIGRMNA	9	60	498.72502029667254	995.4354876601451	2	498.7261657714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_MMGIGRM(Oxidation (M))NA_	REV__ENSG00000067596|ENST00000262415|DHX8;REV__ENST00000587044.1_1_17:41568567-41594747:+|nuORF	26.79610172149135	0.5528238334041078	6				NaN	NaN	0	NaN	13647	4378	18025
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18028	45	NaN	2406.8	30	0	209.94	0.106	+			44904	TVAEISQFLK	10	64	568.3194701300217	1134.6243873268434	2	568.3214111328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVAEISQFLK_	ENSG00000162980|ENST00000295087|ARL5A;ENST00000451247.1_1_X:75249949-75250162:+|nuORF;nc|ENSG00000162980|Q9Y689-2|ARL5A	79.48907831485694	0.19979514868675113	6				NaN	NaN	0	NaN	13648	4378	18025
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18029	45.001	NaN	3123.8	30	0	748.33	0.106	+			9412	EKIEKETLQ	9	57	373.20987774270935	NaN	0	373.2098083496094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EKIEKETLQ_	ENSG00000103021|ENST00000219299|CCDC113;nc|ENSG00000103021|Q9H0I3-2|CFAP263	27.882242232435846	0.3367954786602879	6				NaN	NaN	0	NaN	13649	4378	18025
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18030	45.003	NaN	2551.4	30	0	212.07	0.106	+			51611	YYTNGKLK	8	56	493.7690441752201	985.5235354172402	2	493.7702331542969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_YYTNGKLK_	tr|U7SGG1|U7SGG1_FUSNUToxin-antitoxinsystemYwqKfamilyantitoxin(Fragment)OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02208PE=4SV=1;tr|U7T3F2|U7T3F2_FUSNUPhophatidylinositol-4-phosphate5-kinaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00619PE=4SV=1	58.78195531508484	0.5138399468736706	6				NaN	NaN	0	NaN	13650	4378	18025
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18031	45.005	NaN	2016.4	30	0	164.05	0.035	+			11775	FSLPEMALL	9	57	510.7791378249328	NaN	0	510.7795104980469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FSLPEMALL_	ENSG00000168268|ENST00000422318|NT5DC2;nc|ENSG00000168268|Q9H857-3|NT5DC2;nc|ENSG00000168268|Q9H857-4|NT5DC2;nc|ENSG00000168268|Q9H857|NT5DC2	99.37495909608758	0.022697614825424036	6				NaN	NaN	0	NaN	13651	4378	18025
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18035	45.019	NaN	5150.9	30	0	285.76	0.214				-1	 	0	71	391.22382613315614	780.4330993331123	2	391.2248840332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13652	4381	18034
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18036	45.023	NaN	1674.2	30	0	291.32	0.106	+			33263	RGGDRARL	8	49	450.7594779196882	899.5044029061764	2	450.7606201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RGGDRARL_	ENST00000303052.12_2_15:64592864-64648248:-|nuORF	37.15910966729921	0.6739408393984688	6				NaN	NaN	0	NaN	13653	4381	18034
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18037	45.025	NaN	1627.4	30	0	247.43	0.106	+			51107	YLYEIEKK	8	65	543.3011182251668	NaN	0	543.301025390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YLYEIEKK_	ENST00000531546.1_1_11:104822523-104839261:-|nuORF;nc|ENSG00000196954|P49662-5|CASP4	38.80614096846853	1.7418937515398478	6				NaN	NaN	0	NaN	13654	4381	18034
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18038	45.026	NaN	2468.8	30	0	239.01	0.035	+			29464	PCPRLSQEL	9	68	521.7735490301669	NaN	0	521.7733154296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PCPRLSQEL_	ENSG00000186086|ENST00000495380|NBPF6;ENSG00000196427|ENST00000415641|NBPF4;nc|ENSG00000186086|Q5VWK0-2|NBPF6	53.351449002276354	0.18359631779194618	6				NaN	NaN	0	NaN	13655	4381	18034
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18043	45.041	NaN	3407.8	30	0	303.77	0.214			+	51146	YNYLKYNNP	9	70	594.7901953020444	1187.5658376708886	2	595.294189453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YNYLKYNNP_	REV__tr|U7T016|U7T016_FUSNUHTHdeoR-typedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00853PE=4SV=1	44.116797842482775	0.37197099687881774	6				NaN	NaN	0	NaN	13657	4384	18042
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18044	45.045	NaN	2621.8	30	0	424.8	0.037			+	11341	FLEPIMKPY	9	58	569.3048032453324	1136.5950535574648	2	569.3062133789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FLEPIMKPY_	REV__IL13RA2|p.F376L|1|0.48|ENSG00000123496|chrX:115004095-115004095|A/C|missense_variant	42.396135135203025	0.392153681582562	6				NaN	NaN	0	NaN	13658	4384	18042
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18052	45.063	NaN	22851	30	0	17061	0.214				-1	 	0	76	368.7187499605254	735.4229469878508	2	368.71978759765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13663	4387	18051
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18053	45.067	NaN	3051.9	30	0	555.93	0.106			+	42661	TAVTGVTP	8	45	373.20987774270935	NaN	0	373.2098388671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TAVTGVTP_	REV__ENSG00000135482|ENST00000257940|ZC3H10	33.51558372728122	1.7418937515398478	6				NaN	NaN	0	NaN	13664	4387	18051
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18054	45.069	NaN	4475.2	30	0	1332.3	0.106	+			32608	QYMKIISSF	9	74	558.791786976182	NaN	0	558.7909545898438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_QYMKIISSF_	ENSG00000170606|ENST00000304858|HSPA4;ENST00000514825.1_1_5:132437411-132440125:+|nuORF;HSPA4|p.S737Afs*9|1|0.18|ENSG00000170606|chr5:133103911-133103911|A/-|frameshift_variant	58.78195531508484	0.1545138866451181	6				NaN	NaN	0	NaN	13665	4387	18051
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18055	45.07	NaN	2714.6	30	0	207.37	0.106	+			29327	NYQVTNSMF	9	69	552.243213586309	1102.471874239418	2	552.2445068359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NYQVTNSMF_	CNOT2-GPCPD1|1|fusion;ENSG00000111596|ENST00000229195|CNOT2;ENST00000547321.5_1_12:70671967-70723393:+|nuORF;ENST00000548021.5_1_12:70671967-70729348:+|nuORF;ENST00000549443.5_1_12:70671967-70726591:+|nuORF;ENST00000551873.5_1_12:70671967-70723208:+|nuORF;nc|ENSG00000111596|Q9NZN8-4|CNOT2;nc|ENSG00000111596|Q9NZN8-5|CNOT2	65.46538089061403	0.16805504838372562	6				NaN	NaN	0	NaN	13666	4387	18051
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18056	45.072	NaN	1624.3	30	0	218.41	0.035			+	29077	NTLINGFTF	9	56	513.7646616133638	1025.5147702935276	2	513.7662963867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NTLINGFTF_	REV__ARHGAP29|p.K371Sfs*12|1|0.32|ENSG00000137962|chr1:94202575-94202575|T/-|frameshift_variant;REV__ARHGAP29|p.K679Rfs*35|1|0.28|ENSG00000137962|chr1:94184945-94184945|T/-|frameshift_variant;REV__ENSG00000137962|ENST00000260526|ARHGAP29;REV__nc|ENSG00000137962|Q52LW3-2|ARHGAP29	43.650786325866115	0.37743712540499297	6				NaN	NaN	0	NaN	13667	4387	18051
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18062	45.088	NaN	4808	30	0	247.49	0.214				-1	 	0	79	413.2369631148472	824.4593732964944	2	413.23797607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13670	4390	18061
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18063	45.092	NaN	3118.2	30	0	311.56	0.106			+	17428	IATLRSILD	9	61	501.3033654893706	1000.5921780455412	2	501.3044128417969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IATLRSILD_	REV__ENSG00000183814|ENST00000681046|LIN9;REV__nc|ENSG00000183814|Q5TKA1-2|LIN9;REV__nc|ENSG00000183814|Q5TKA1-3|LIN9	41.42661286455405	0.403525789677298	6				NaN	NaN	0	NaN	13671	4390	18061
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18064	45.094	NaN	2915.7	30	0	291.28	0.106				-1	KVCQRLNCGV	10	68	588.8040603297185	1175.5935677262369	2	589.3077392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_KVC(Carbamidomethyl (C))QRLNCGV_	ENSG00000110448|ENST00000347785|CD5	44.116797842482775	0.5112108506279902	6				NaN	NaN	0	NaN	13672	4390	18061
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18065	45.096	NaN	4007.4	30	0	441.59	0.034	+			44536	TSYHFSTI	8	61	478.2299027144126	954.4452524956253	2	478.23187255859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TSYHFSTI_	ENST00000370828.3_1_X:132436805-132436874:-|nuORF	68.484700416344	0.4195245774506064	6				NaN	NaN	0	NaN	13673	4390	18061
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18071	45.11	NaN	10605	30	0	1162.1	0.214				-1	 	0	87	338.1924724811021	674.3703920290042	2	338.1934509277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13676	4393	18070
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18072	45.114	NaN	2563.9	30	0	163.22	0.106				-1	 	0	64	435.2499397185046	868.4853265038092	2	435.2511291503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13677	4393	18070
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18073	45.116	NaN	2630.7	30	0	289.56	0.106	+			42765	TDSTVNTRL	9	58	503.7639557630843	NaN	0	503.7640686035156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TDSTVNTRL_	ENST00000467592.5_1_7:23381795-23387427:-|nuORF	47.95952297671804	0.22075498469600283	6				NaN	NaN	0	NaN	13678	4393	18070
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18074	45.118	NaN	2058	30	0	374.55	0.036	+			10164	ESVNVCKVVN	10	65	545.7808837890625	NaN	0	545.7808837890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ESVNVCKVVN_	ENSG00000076356|ENST00000367033|PLXNA2	39.252832667884924	0.37128895876774715	6				NaN	NaN	0	NaN	13679	4393	18070
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18079	45.132	NaN	2728	30	0	191.61	0.214	+			24724	LHPGESVIQVS	11	70	583.3147568801165	1164.614960827033	2	583.316162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LHPGESVIQVS_	ENSG00000174992|ENST00000400752|ZG16	42.33807565288922	0.5259510355945483	6				NaN	NaN	0	NaN	13681	4396	18078
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18080	45.136	NaN	2796	30	0	205.35	0.106	+			10698	EYVVRTFTL	9	68	564.3069505106341	1126.5993480880682	2	564.3084106445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EYVVRTFTL_	ENSG00000152894|ENST00000368226|PTPRK;nc|ENSG00000152894|Q15262-3|PTPRK;nc|ENSG00000152894|Q15262-4|PTPRK;nc|ENSG00000152894|Q15262|PTPRK;PTPRK|p.L1219*|2|0.16|ENSG00000152894|chr6:127981168-127981168|A/-|frameshift_variant;PTPRK|p.Y1034Tfs*61|1|0.4|ENSG00000152894|chr6:127985870-127985870|C/-|frameshift_variant	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	13682	4396	18078
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18081	45.138	NaN	1802.1	30	0	147.31	0.106				-1	SGKKHLLQE	9	68	541.3040830835541	1080.5936132339082	2	541.305908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SGKKHLLQE_	ENSG00000072840|ENST00000264956|EVC;ENST00000506240.1_1_4:5795319-5799100:+|nuORF;EVC|p.R663W|1|0.06|ENSG00000072840|chr4:5797122-5797122|C/T|missense_variant;EVC|p.R675Q|1|0.24|ENSG00000072840|chr4:5797159-5797159|G/A|missense_variant;EVC|p.V948Cfs*22|1|0.07|ENSG00000072840|chr4:5810394-5810394|G/-|frameshift_variant	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	13683	4396	18078
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18082	45.14	NaN	2137.1	30	0	233.17	0.106	+			19094	IYISTLKTEF	10	70	607.8345599736992	1213.6545670141984	2	607.8363647460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IYISTLKTEF_	ENSG00000100591|ENST00000216479|AHSA1;nc|ENSG00000100591|O95433-2|AHSA1	52.936696900407355	0.4300801048568001	6				NaN	NaN	0	NaN	13684	4396	18078
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18083	45.141	NaN	2923.1	30	0	244.27	0.106	+			28243	NDFLLKTSL	9	65	525.7964477539062	NaN	0	525.7964477539062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NDFLLKTSL_	ENSG00000132549|ENST00000357162|VPS13B;nc|ENSG00000132549|Q7Z7G8-6|VPS13B;nc|ENSG00000132549|Q7Z7G8|VPS13B;VPS13B|p.M3156Ifs*2|1|0.07|ENSG00000132549|chr8:99832427-99832428|-/TA|frameshift_variant;VPS13B|p.S3988Lfs*4|1|0.55|ENSG00000132549|chr8:99875552-99875553|-/C|frameshift_variant;VPS13B|p.S3988Pfs*25|1|0.11|ENSG00000132549|chr8:99875553-99875553|C/-|frameshift_variant	44.639436926238396	0.2436354862195384	6				NaN	NaN	0	NaN	13685	4396	18078
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18084	45.143	NaN	1268.3	30	0	149.34	0.041				-1	KLARHHLMWLM	11	62	734.387939453125	NaN	0	734.387939453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Oxidation (M)	_KLARHHLM(Oxidation (M))WLM(Oxidation (M))_	ENST00000367272.4_1_Y:28479905-28500547:-|nuORF	20.94693142431847	0.456735970842152	6				NaN	NaN	0	NaN	13686	4396	18078
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18091	45.16	NaN	15824	30	0	2554.1	0.214	+			30145	PSAKHRKIA	9	76	504.3089185652326	1006.6032841972652	2	504.3104553222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PSAKHRKIA_	ENSG00000204764|ENST00000523189|RANBP17;ENST00000443155.5_1_5:170288887-170338173:+|nuORF;ENST00000519130.5_1_5:170289037-170336799:+|nuORF;nc|ENSG00000204764|Q9H2T7-2|RANBP17;RANBP17|p.N641Tfs*35|2|0.1|ENSG00000204764|chr5:171183218-171183218|A/-|frameshift_variant	60.97194046774394	0.20551255781574032	6				NaN	NaN	0	NaN	13690	4399	18090
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18092	45.163	NaN	2849.8	30	0	689.26	0.106	+			29417	PCACHLLGGAL	11	67	556.2729827380542	1110.5314125429084	2	556.2745971679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_PCAC(Carbamidomethyl (C))HLLGGAL_	ENST00000594013.5_1_19:44303920-44304121:-|nuORF	40.5726180659479	0.5501078856804735	6				NaN	NaN	0	NaN	13691	4399	18090
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18093	45.165	NaN	1031	30	0	239.46	0.033	+			33220	RFPGCMKG	8	38	448.2177529721727	894.4209530111455	2	448.21966552734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RFPGCMKG_	ENSG00000124253|ENST00000319441|PCK1;PCK1|p.N346Qfs*29|1|0.24|ENSG00000124253|chr20:57564238-57564239|-/C|frameshift_variant	19.359975847455235	0.7988239741663654	6				NaN	NaN	0	NaN	13692	4399	18090
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18098	45.18	NaN	2882.1	30	0	158.83	0.214				-1	 	0	58	355.21345570615017	708.4123584791004	2	355.21435546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13694	4402	18097
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18099	45.183	NaN	2863.1	30	0	291.38	0.106			+	29526	PEASRPALEM	10	72	550.7742019241392	1099.5338509150783	2	550.775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PEASRPALEM_	REV__ENSG00000253537|ENST00000518325|PCDHGA7;REV__nc|ENSG00000253537|Q9Y5G6-2|PCDHGA7;REV__PCDHGA7|p.V757Sfs*12|1|0.31|ENSG00000253537|chr5:141385167-141385167|G/-|frameshift_variant	37.81151784470057	0.569310847604193	6				NaN	NaN	0	NaN	13695	4402	18097
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18100	45.185	NaN	3274.4	30	0	394.9	0.036			+	18306	IPRMMWKI	8	61	537.8013758319447	NaN	0	537.801025390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IPRMMWKI_	REV__ENST00000588072.5_1_18:11884309-11884447:-|nuORF	35.200714571348534	1.7418937515398478	6				NaN	NaN	0	NaN	13696	4402	18097
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18105	45.2	NaN	2635.1	30	0	394.52	0.214	+			27489	MMAPICLVEN	10	62	560.7639783315069	NaN	0	560.7623901367188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MMAPICLVEN_	ENSG00000162654|ENST00000355754|GBP4	30.317721548370564	0.4006274431774794	6				NaN	NaN	0	NaN	13698	4405	18104
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18106	45.204	NaN	1494.2	30	0	128.28	0.033	+			29609	PFVVVSVVG	9	49	451.7696285008754	901.5247040685508	2	451.7705078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PFVVVSVVG_	ENSG00000100154|ENST00000397906|TTC28;TTC28|p.A2381Lfs*5|1|0.15|ENSG00000100154|chr22:27982526-27982526|C/-|frameshift_variant;TTC28|p.D729Rfs*10|1|0.19|ENSG00000100154|chr22:28107660-28107661|-/T|frameshift_variant;TTC28|p.P1795Qfs*108|1|0.33|ENSG00000100154|chr22:27993379-27993379|G/-|frameshift_variant;TTC28|p.V1305Wfs*29|1|0.31|ENSG00000100154|chr22:28094099-28094099|C/-|frameshift_variant	33.51558372728122	0.4900267029546261	6				NaN	NaN	0	NaN	13699	4405	18104
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18111	45.218	NaN	2631.4	30	0	293.42	0.214	+			42120	SYLLRPMVF	9	65	571.3056643294061	1140.5967757256121	2	571.3074951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_SYLLRPM(Oxidation (M))VF_	ENSG00000137860|ENST00000347644|SLC28A2	71.87747018426188	0.13267044672804276	6				NaN	NaN	0	NaN	13701	4408	18110
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18112	45.222	NaN	1545.3	30	0	317.78	0.106	+			10095	ESLIKSGKK	9	57	495.3029928768046	988.5914328204092	2	495.30401611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ESLIKSGKK_	ENSG00000150667|ENST00000350221|FSIP1	25.57405402267927	0.5642445186134241	6				NaN	NaN	0	NaN	13702	4408	18110
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18113	45.224	NaN	1516.5	30	0	265.9	0.038	+			8061	DVIKAAHRCAE	11	44	404.8766817461046	NaN	0	404.8764953613281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DVIKAAHRCAE_	ENST00000438325.2_1_9:92064608-92065217:+|nuORF	22.561587123415745	0.456735970842152	6				NaN	NaN	0	NaN	13703	4408	18110
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18121	45.244	NaN	3337.3	30	0	189.03	0.214				-1	EYFYILVVM	9	68	596.801559920542	1191.588566907884	2	596.8032836914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_EYFYILVVM(Oxidation (M))_	ENSG00000152049|ENST00000281830|KCNE4;KCNE4|p.E133Rfs*3|2|0.33|ENSG00000152049|chr2:223053069-223053069|G/-|frameshift_variant;nc|ENSG00000152049|Q8WWG9|KCNE4	40.5726180659479	0.4135428067754104	6				NaN	NaN	0	NaN	13708	4411	18120
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18122	45.247	NaN	2103.7	30	0	446.57	0.106			+	31141	QGETRLTGST	10	67	525.2675569495098	NaN	0	525.2677612304688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QGETRLTGST_	REV__nc|ENSG00000178217|Q5SQS7-2|SH2D4B;REV__nc|ENSG00000178217|Q5SQS7-3|SH2D4B	49.536043120802724	0.30853568297719935	6				NaN	NaN	0	NaN	13709	4411	18120
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18123	45.249	NaN	1110.3	30	0	319.93	0.033	+			15726	GVRVICPV	8	41	421.7513834520782	NaN	0	421.75140380859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GVRVICPV_	ENST00000359890.7_2_14:23370092-23370311:-|nuORF	26.79610172149135	1.7418937515398478	6				NaN	NaN	0	NaN	13710	4411	18120
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18130	45.267	NaN	4041.7	30	0	1363.3	0.214				-1	LKNLPLADQG	10	71	555.8115835095508	1109.6086140859015	2	555.8134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LKNLPLADQG_	DSP|p.S698P|1|0.21|ENSG00000096696|chr6:7572030-7572030|T/C|missense_variant;DSP|p.Y787Lfs*2|1|0.17|ENSG00000096696|chr6:7574715-7574716|-/T|frameshift_variant;ENSG00000096696|ENST00000379802|DSP;nc|ENSG00000096696|P15924-2|DSP;nc|ENSG00000096696|P15924-3|DSP	30.317721548370564	0.6322445173429027	6				NaN	NaN	0	NaN	13714	4414	18129
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18131	45.271	NaN	1881.1	30	0	156.35	0.106	+			39026	SSSKGKVG	8	55	375.2107656096547	748.4069782861094	2	375.21185302734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SSSKGKVG_	ENST00000372486.5_1_9:132397750-132398029:+|nuORF	7.690282842768113	0.7803663624056911	6				NaN	NaN	0	NaN	13715	4414	18129
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18132	45.273	NaN	920.93	30	0	96.567	0.106			+	30442	PYPKHQLV	8	41	491.2782495891561	980.5419462451122	2	491.2796630859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PYPKHQLV_	REV__ENST00000383791.7_1_3:15296828-15296978:-|nuORF	28.2542754592877	0.7411748056684583	6				NaN	NaN	0	NaN	13716	4414	18129
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18133	45.274	NaN	2436	30	0	518.46	0.037	+			26372	LTCVVMFLVV	10	70	562.3156416083452	1122.6167302834904	2	562.8195190429688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LTCVVMFLVV_	ENSG00000108433|ENST00000640051|GOSR2	27.882242232435846	0.6521336255503853	6				NaN	NaN	0	NaN	13717	4414	18129
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18139	45.289	NaN	1532.4	30	0	163.63	0.142	+			44478	TSRIAIGPL	9	50	464.2829075002949	926.5512620673899	2	464.2851257324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TSRIAIGPL_	ENSG00000157106|ENST00000446231|SMG1;ENST00000569764.1_16:18870304-18870499:-|nuORF;nc|ENSG00000157106|Q96Q15-2|SMG1;nc|ENSG00000157106|Q96Q15-3|SMG1;nc|ENSG00000157106|Q96Q15-4|SMG1;SMG1|p.A3214Rfs*29|1|0.06|ENSG00000157106|chr16:18828132-18828133|-/ATTTTCT|frameshift_variant	51.33545320467046	0.2872990594074956	6				NaN	NaN	0	NaN	13720	4417	18138
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18148	45.311	NaN	6056.1	30	0	5034.2	0.214				-1	 	0	35	346.7057840110168	691.3970150888337	2	346.7066650390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13726	4420	18147
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18149	45.315	NaN	2588.4	30	0	250.36	0.106			+	31103	QFQYRTLDE	9	65	600.2886072681343	1198.5626616030686	2	600.2904052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QFQYRTLDE_	REV__ENSG00000183549|ENST00000331849|ACSM5	34.172542307311794	0.4838870758800184	6				NaN	NaN	0	NaN	13727	4420	18147
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18150	45.317	NaN	2054.2	30	0	243.09	0.035			+	29893	PLMFAFSAR	9	60	520.2749963154505	1038.535439697701	2	520.7735595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PLMFAFSAR_	REV__SLC13A5|p.S497R|1|0.07|ENSG00000141485|chr17:6687613-6687613|A/C|missense_variant	27.882242232435846	0.5426732730940306	6				NaN	NaN	0	NaN	13728	4420	18147
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18155	45.331	NaN	3714.8	30	0	225.67	0.214				-1	 	0	67	360.20550611250553	718.3964592918111	2	360.20654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13730	4423	18154
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18156	45.335	NaN	2944.9	30	0	364.25	0.106			+	-1	EMFKQGNVM	9	60	558.2492580701971	NaN	0	558.2493896484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Oxidation (M)	_EM(Oxidation (M))FKQGNVM(Oxidation (M))_	REV__ENSG00000198901|ENST00000394249|PRC1;REV__nc|ENSG00000198901|O43663-3|PRC1;REV__nc|ENSG00000198901|O43663-4|PRC1	30.317721548370564	0.32449924987115025	6				NaN	NaN	0	NaN	13731	4423	18154
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18157	45.337	NaN	2392.3	30	0	211.54	0.035			+	33803	RQLTAPTTY	9	67	525.783563296062	NaN	0	525.7821044921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RQLTAPTTY_	REV__ENST00000460192.5_1_1:8022845-8029412:+|nuORF	47.91560031466742	0.22105767942158736	6				NaN	NaN	0	NaN	13732	4423	18154
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18161	45.351	NaN	3511.1	30	0	851.12	0.214				-1	ATMTFFKKK	9	51	373.20987774270935	NaN	0	373.2099609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ATM(Oxidation (M))TFFKKK_	ENST00000487395.1_1_6:102376237-102441071:+|nuORF	24.519189625965996	0.35377483217337163	6				NaN	NaN	0	NaN	13733	4426	18160
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18162	45.354	NaN	2953.4	30	0	199.33	0.106			+	26716	LVKPDNFVE	9	62	530.7857801488641	1059.557007364528	2	530.7882080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LVKPDNFVE_	REV__ENSG00000135862|ENST00000258341|LAMC1;REV__LAMC1|p.T1225Kfs*5|1|0.07|ENSG00000135862|chr1:183132506-183132507|-/AAAT|frameshift_variant	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	13734	4426	18160
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18163	45.356	NaN	3355.1	30	0	244.48	0.106			+	11421	FLSNLDRII	9	68	545.819108812587	NaN	0	545.8190307617188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FLSNLDRII_	REV__ENSG00000096968|ENST00000381652|JAK2	39.252832667884924	0.27938773122138094	6				NaN	NaN	0	NaN	13735	4426	18160
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18164	45.358	NaN	2452.6	30	0	338.89	0.036			+	26181	LSRLTYEVN	9	68	547.797574161826	NaN	0	547.7974243164062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LSRLTYEVN_	REV__ENSG00000151229|ENST00000280871|SLC2A13;REV__SLC2A13|p.T491Qfs*41|1|0.08|ENSG00000151229|chr12:39764833-39764833|T/-|frameshift_variant	39.252832667884924	0.27938773122138094	6				NaN	NaN	0	NaN	13736	4426	18160
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18171	45.375	NaN	1916	30	0	143.9	0.214				-1	 	0	54	391.22382613315614	780.4330993331123	2	391.2249450683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13740	4429	18170
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18172	45.378	NaN	2691.4	30	0	432.83	0.106			+	21627	KPRPALSTVF	10	67	558.3306189499884	1114.6466849667768	2	558.3330688476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KPRPALSTVF_	REV__ENST00000376030.6_1_1:14925446-14925491:+|nuORF	35.15202426646627	0.5927656479315102	6				NaN	NaN	0	NaN	13741	4429	18170
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18173	45.38	NaN	2148	30	0	405.79	0.106				-1	 	0	64	543.299532752052	542.2922562854519	1	543.300537109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13742	4429	18170
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18174	45.382	NaN	1018.2	30	0	68.406	0.04			+	43889	TNDMTPDMFDR	11	54	671.7733764648438	NaN	0	671.7733764648438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_TNDMTPDMFDR_	REV__ENSG00000125875|ENST00000354200|TBC1D20;REV__ENST00000494633.1_1_20:419232-422368:-|nuORF;REV__nc|ENSG00000125875|Q96BZ9-3|TBC1D20	18.262085536374414	0.456735970842152	6				NaN	NaN	0	NaN	13743	4429	18170
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18180	45.397	NaN	2888	30	0	772.75	0.214	+			26965	LYKETLEIE	9	67	569.3048032453324	1136.5950535574648	2	569.306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LYKETLEIE_	DYNC2H1|p.L4021Wfs*5|1|0.3|ENSG00000187240|chr11:103358262-103358262|T/-|frameshift_variant;DYNC2H1|p.P3966Hfs*44|1|0.22|ENSG00000187240|chr11:103321194-103321194|T/-|frameshift_variant;ENSG00000187240|ENST00000375735|DYNC2H1;nc|ENSG00000187240|Q8NCM8-2|DYNC2H1	35.61828744233558	0.47037581924408073	6				NaN	NaN	0	NaN	13746	4432	18179
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18181	45.401	NaN	2597.3	30	0	404.93	0.106			+	11034	FELGIYGAGI	10	62	520.2749963154505	1038.535439697701	2	520.2781372070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FELGIYGAGI_	REV__tr|U7SM72|U7SM72_FUSNUMercuricreductaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02103PE=3SV=1	37.15910966729921	0.575322462179216	6				NaN	NaN	0	NaN	13747	4432	18179
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18182	45.403	NaN	3843.6	30	0	402.87	0.106			+	-1	EMITLVHGAK	10	64	557.8003057292193	1113.5860585252385	2	557.8018188476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_EM(Oxidation (M))ITLVHGAK_	REV__ENSG00000128052|ENST00000263923|KDR;REV__KDR|p.T1238Hfs*7|1|0.51|ENSG00000128052|chr4:55082586-55082586|T/-|frameshift_variant;REV__nc|ENSG00000128052|P35968-2|KDR;REV__nc|ENSG00000128052|P35968-3|KDR	40.77816245573522	0.5419747034533848	6				NaN	NaN	0	NaN	13748	4432	18179
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18183	45.404	NaN	1924.6	30	0	207.7	0.106	+			9712	EMLAVSKLY	9	68	527.2856597106478	1052.5567664880955	2	527.287353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EMLAVSKLY_	ENSG00000112293|ENST00000230036|GPLD1	44.377184641726394	0.36891676396732553	6				NaN	NaN	0	NaN	13749	4432	18179
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18184	45.406	NaN	1292	30	0	72.955	0.035	+			2694	AQPAQTSYL	9	45	489.74852584208134	977.4824987509627	2	489.74951171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AQPAQTSYL_	ENSG00000115145|ENST00000263904|STAM2;STAM2|p.Q453Kfs*10|1|0.07|ENSG00000115145|chr2:152120795-152120795|G/-|frameshift_variant	35.61828744233558	0.47037581924408073	6				NaN	NaN	0	NaN	13750	4432	18179
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18191	45.424	NaN	7592	30	0	382.98	0.214				-1	 	0	82	413.2369631148472	824.4593732964944	2	413.2379150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13754	4435	18190
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18192	45.428	NaN	7943.8	30	0	1370.9	0.106	+			10882	FCFHLRIF	8	73	570.2943005512592	1138.5740481693183	2	570.2965087890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_FC(Carbamidomethyl (C))FHLRIF_	ENSG00000123338|ENST00000293373|NCKAP1L;nc|ENSG00000123338|P55160-2|NCKAP1L	54.76467175910256	0.5536104764165384	6				NaN	NaN	0	NaN	13755	4435	18190
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18193	45.43	NaN	2780.8	30	0	245.55	0.106	+			33671	RNLNYIEF	8	63	534.7776442873027	NaN	0	534.7781982421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RNLNYIEF_	tr|U7T0F0|U7T0F0_FUSNUTyrosine--tRNAligaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=tyrSPE=3SV=1	60.29395666154354	1.7418937515398478	6				NaN	NaN	0	NaN	13756	4435	18190
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18194	45.431	NaN	1829.9	30	0	378.32	0.106				-1	MSPQVNAVFP	10	66	553.2689208984375	NaN	0	553.2689208984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_M(Oxidation (M))SPQVNAVFP_	ENSG00000160746|ENST00000292246|ANO10;nc|ENSG00000160746|Q9NW15-2|ANO10;nc|ENSG00000160746|Q9NW15-3|ANO10;nc|ENSG00000160746|Q9NW15-4|ANO10;nc|ENSG00000160746|Q9NW15-5|ANO10	35.61828744233558	0.3832230071539346	6				NaN	NaN	0	NaN	13757	4435	18190
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18195	45.433	NaN	1906.5	30	0	214.83	0.035			+	12021	FWSSSVSIL	9	50	513.2689732116902	1024.5233934901803	2	513.2696533203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FWSSSVSIL_	REV__ENST00000301740.12_1_16:2820975-2821305:+|nuORF	38.80614096846853	0.43426287593479557	6				NaN	NaN	0	NaN	13758	4435	18190
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18202	45.45	NaN	206280	30	0	24711	0.153				-1	 	0	109	338.1924724811021	674.3703920290042	2	338.1934509277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13762	4438	18201
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18203	45.452	NaN	3538.4	30	0	244.11	0.106				-1	 	0	60	349.18352481216374	696.3524966911275	2	349.18463134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13763	4438	18201
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18204	45.454	NaN	4057.4	30	0	1001.5	0.106				-1	ATRMRSVPAI	10	67	373.20987774270935	NaN	0	373.2098388671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_ATRM(Oxidation (M))RSVPAI_	ENST00000413171.6_1_7:872201-878607:+|nuORF	26.063383197487333	0.4145965855542893	6				NaN	NaN	0	NaN	13764	4438	18201
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18205	45.456	NaN	2794	30	0	130.83	0.106				-1	 	0	69	435.2499397185046	868.4853265038092	2	435.25128173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13765	4438	18201
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18206	45.458	NaN	868.99	30	0	153.89	0.106				-1	 	0	38	285.1612179807126	568.3078830282252	2	285.1619567871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13766	4438	18201
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18207	45.46	NaN	2852.9	30	0	258.47	0.106				-1	 	0	58	360.1746296543413	718.3347063754826	2	360.17572021484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13767	4438	18201
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18208	45.461	NaN	858.82	30	0	109.43	0.027				-1	 	0	41	219.12207408462945	436.2295952360589	2	219.12271118164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13768	4438	18201
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18209	45.462	NaN	369.9	30	0	46.256	0.133				-1	 	0	27	241.13507892973342	480.25560492626687	2	241.1356658935547	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	8	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13769	4438	18201
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18214	45.478	NaN	6102.2	30	0	766.99	0.214	+			14889	GTLSGWILSK	10	71	531.302330209714	1060.590107486228	2	531.303466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTLSGWILSK_	CANX|p.D436*|1|0.11|ENSG00000127022|chr5:179722918-179722919|-/T|frameshift_variant;ENSG00000127022|ENST00000247461|CANX;nc|ENSG00000127022|P27824-2|CANX	99.01295224348159	0.08062808246117298	6				NaN	NaN	0	NaN	13771	4441	18213
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18215	45.481	NaN	3495.9	30	0	623.18	0.106	+			16612	HGSGGGKN	8	73	357.1691272903472	712.3237016474944	2	357.1706848144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HGSGGGKN_	ENSG00000133124|ENST00000372129|IRS4;IRS4|p.K843Ffs*9|1|0.05|ENSG00000133124|chrX:108733818-108733819|-/TATTACAAAA|frameshift_variant;IRS4|p.K843Pfs*106|1|0.02|ENSG00000133124|chrX:108733819-108733820|-/GA|frameshift_variant;IRS4|p.S1063Afs*9|1|0.36|ENSG00000133124|chrX:108733159-108733159|G/-|frameshift_variant;nc|ENSG00000133124|O14654|IRS4	18.324413293986947	0.7971860551947066	6				NaN	NaN	0	NaN	13772	4441	18213
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18216	45.483	NaN	826.07	30	0	165.73	0.106				-1	 	0	37	263.14821633917825	524.2818797451565	2	263.1489562988281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13773	4441	18213
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18217	45.485	NaN	4133.5	30	0	374.78	0.106			+	48471	VTLRGATPLY	10	76	545.819108812587	NaN	0	545.81884765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VTLRGATPLY_	REV__ENSG00000213023|ENST00000600079|SYT3;REV__ENST00000595117.1_1_19:51125949-51129280:-|nuORF	28.5767321226876	0.40634399112407993	6				NaN	NaN	0	NaN	13774	4441	18213
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18218	45.487	NaN	4082.7	30	0	403.38	0.106				-1	 	0	57	294.16646756474125	586.3183821962825	2	294.16741943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13775	4441	18213
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18219	45.488	NaN	2264.4	30	0	133.8	0.106			+	35676	SDGGGPGAGG	10	63	366.15077873455755	730.2870045359151	2	366.6529541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SDGGGPGAGG_	REV__ENST00000392533.7_1_12:118704555-118810629:-|nuORF;REV__ENST00000542532.5_1_12:118721480-118810629:-|nuORF	30.503639358989545	0.6307262373768582	6				NaN	NaN	0	NaN	13776	4441	18213
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18220	45.49	NaN	3330.9	30	0	647.76	0.038			+	51486	YVIMYIEYL	9	73	603.8095302914959	1205.6045076497917	2	603.8111572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_YVIMYIEYL_	REV__ENST00000553544.1_1_14:35465915-35466038:+|nuORF	38.80614096846853	0.43426287593479557	6				NaN	NaN	0	NaN	13777	4441	18213
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18229	45.51	NaN	3156.6	30	0	237.11	0.214			+	24741	LHRRLAEL	8	64	504.3089185652326	1006.6032841972652	2	504.31036376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LHRRLAEL_	REV__PKN3|p.Q113H|1|0.4|ENSG00000160447|chr9:128705807-128705807|G/C|missense_variant	31.954861631926434	0.7126016770032289	6				NaN	NaN	0	NaN	13783	4444	18228
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18230	45.514	NaN	13010	30	0	1427	0.106				-1	LVGSVRCR	8	86	316.18032770029197	NaN	0	316.18023681640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LVGSVRC(Carbamidomethyl (C))R_	ENST00000299626.9_1_11:77838464-77850674:-|nuORF	24.20275056022122	1.7418937515398478	6				NaN	NaN	0	NaN	13784	4444	18228
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18231	45.516	NaN	135.59	30	0	52.024	0.106				-1	 	0	11	197.1096060407655	NaN	0	197.10955810546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13785	4444	18228
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18232	45.517	NaN	1783.4	30	0	186.59	0.106			+	13147	GGPGGGESGG	10	48	366.15077873455755	730.2870045359151	2	366.15338134765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_GGPGGGESGG_	REV__ENSG00000100154|ENST00000397906|TTC28;REV__TTC28|p.A2381Lfs*5|1|0.15|ENSG00000100154|chr22:27982526-27982526|C/-|frameshift_variant	23.04248740728303	0.69165701907106	6				NaN	NaN	0	NaN	13786	4444	18228
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18233	45.519	NaN	1589	30	0	77.029	0.106				-1	 	0	52	362.6507245191627	723.2868961051254	2	362.6519470214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13787	4444	18228
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18234	45.521	NaN	2065.9	30	0	274.65	0.038			+	-1	AGEEEEMKNGD	11	59	612.7386548099479	NaN	0	612.7384643554688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Oxidation (M)	_AGEEEEM(Oxidation (M))KNGD_	REV__ENSG00000052749|ENST00000370992|RRP12;REV__ENST00000479481.5_1_10:99116853-99131081:-|nuORF;REV__ENST00000491313.5_1_10:99116853-99127090:-|nuORF;REV__nc|ENSG00000052749|Q5JTH9-2|RRP12;REV__nc|ENSG00000052749|Q5JTH9-3|RRP12	30.317721548370564	0.4303027717346894	6				NaN	NaN	0	NaN	13788	4444	18228
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18235	45.522	NaN	705.78	30	0	73.597	0.137			+	42660	TAVTGTEKI	9	37	307.17491996316227	NaN	0	307.17510986328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TAVTGTEKI_	REV__ENSG00000198932|ENST00000537097|GPRASP1;REV__GPRASP1|p.I1166Ffs*16|1|0.29|ENSG00000198932|chrX:102657404-102657404|A/-|frameshift_variant;REV__GPRASP1|p.L1217Ffs*23|1|0.19|ENSG00000198932|chrX:102657557-102657558|-/T|frameshift_variant	24.20275056022122	0.35506675290109213	6				NaN	NaN	0	NaN	13789	4444	18228
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18245	45.547	NaN	2734.3	30	0	619.66	0.214			+	-1	PTPETGRLM	9	56	509.2556630552277	1016.4967731772555	2	509.25787353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_PTPETGRLM(Oxidation (M))_	REV__ENSG00000282872|ENST00000634842|C1orf232	27.882242232435846	0.5426732730940306	6				NaN	NaN	0	NaN	13796	4447	18244
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18246	45.55	NaN	1815.7	30	0	97.477	0.039			+	-1	CAPLCCRFMDV	11	59	657.7792358398438	NaN	0	657.7792358398438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_C(Carbamidomethyl (C))APLCCRFMDV_	REV__ENSG00000251287|ENST00000425059|ALG1L2;REV__ENST00000437882.2_1_12:8382094-8384253:+|nuORF	32.81241826257853	0.4191849651971536	6				NaN	NaN	0	NaN	13797	4447	18244
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18254	45.57	NaN	3995	30	0	506.32	0.214			+	8632	EDGINIQAEM	10	67	560.2547554356813	1118.4949579381625	2	560.2550659179688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EDGINIQAEM_	REV__tr|U7SGG1|U7SGG1_FUSNUToxin-antitoxinsystemYwqKfamilyantitoxin(Fragment)OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_02208PE=4SV=1;REV__tr|U7T3F2|U7T3F2_FUSNUPhophatidylinositol-4-phosphate5-kinaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00619PE=4SV=1	41.42661286455405	0.5359995577334734	6				NaN	NaN	0	NaN	13802	4450	18253
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18255	45.574	NaN	2898.8	30	0	345.3	0.106			+	30710	QDEVLQANI	9	59	515.2647883686244	1028.5150238040487	2	515.2664794921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QDEVLQANI_	REV__ENSG00000100280|ENST00000357586|AP1B1;REV__nc|ENSG00000100280|Q10567-2|AP1B1;REV__nc|ENSG00000100280|Q10567-3|AP1B1;REV__nc|ENSG00000100280|Q10567-4|AP1B1	49.44154591367651	0.3095138337212152	6				NaN	NaN	0	NaN	13803	4450	18253
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18256	45.576	NaN	3717.8	30	0	944.05	0.106	+			10384	EVAVKAARH	9	60	490.785847069744	979.5571412062881	2	490.78704833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EVAVKAARH_	ENSG00000006432|ENST00000554752|MAP3K9;MAP3K9|p.P970Qfs*74|1|0.11|ENSG00000006432|chr14:70730786-70730786|G/-|frameshift_variant;MAP3K9|p.Q618Sfs*4|1|0.14|ENSG00000006432|chr14:70736023-70736024|-/G|frameshift_variant;MAP3K9|p.S907Rfs*21|1|0.24|ENSG00000006432|chr14:70732651-70732651|G/-|frameshift_variant;nc|ENSG00000006432|P80192-4|MAP3K9	24.519189625965996	0.574102787014149	6				NaN	NaN	0	NaN	13804	4450	18253
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18257	45.578	NaN	1515.8	30	0	146.12	0.106	+			7239	DALITHVL	8	50	441.2580894633628	NaN	0	441.2584228515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DALITHVL_	ADH1B|p.F353S|1|0.28|ENSG00000196616|chr4:99310810-99310810|A/G|missense_variant;ENSG00000187758|ENST00000209668|ADH1A;ENSG00000196616|ENST00000305046|ADH1B;nc|ENSG00000196616|P00325-2|ADH1B	57.81127852772723	1.7418937515398478	6				NaN	NaN	0	NaN	13805	4450	18253
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18258	45.579	NaN	3452.8	30	0	326.89	0.106				-1	 	0	53	472.74611338442924	943.4776738356585	2	472.74700927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13806	4450	18253
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18259	45.581	NaN	2672.3	30	0	217.55	0.035	+			15904	HAAMLGLMY	9	61	503.7447655348485	1005.474978136497	2	503.7464904785156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_HAAMLGLMY_	ENSG00000118705|ENST00000237530|RPN2;nc|ENSG00000118705|P04844-2|RPN2	39.021493756699265	0.43173687394350213	6				NaN	NaN	0	NaN	13807	4450	18253
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18268	45.601	NaN	2862.1	30	0	299.65	0.214	+			26980	LYLSSHGLW	9	70	538.2808424834244	1074.5471320336487	2	538.282958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LYLSSHGLW_	CFAP43|p.D1520Ifs*15|1|0.35|ENSG00000197748|chr10:104133658-104133658|C/-|frameshift_variant;CFAP43|p.S792Afs*19|1|0.25|ENSG00000197748|chr10:104179848-104179848|T/-|frameshift_variant;CFAP43|p.V1381Wfs*7|1|0.2|ENSG00000197748|chr10:104143444-104143444|T/-|frameshift_variant;ENSG00000197748|ENST00000357060|CFAP43;nc|ENSG00000197748|Q8NDM7-2|CFAP43;nc|ENSG00000197748|Q8NDM7-3|CFAP43	57.81127852772723	0.2318599694398087	6				NaN	NaN	0	NaN	13813	4453	18267
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18269	45.605	NaN	3665.1	30	0	455.3	0.106			+	10692	EYVEQPLRG	9	71	545.7799545992656	1089.545356265331	2	545.7813720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EYVEQPLRG_	REV__ENST00000571422.1_1_17:44337721-44337880:-|nuORF	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	13814	4453	18267
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18270	45.607	NaN	2187.4	30	0	250.93	0.035			+	7611	DKDPKSDQL	9	60	523.2633666992188	NaN	0	523.2633666992188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DKDPKSDQL_	REV__ENSG00000159884|ENST00000426546|CCDC107;REV__ENST00000378406.5_2_9:35660722-35661181:+|nuORF;REV__nc|ENSG00000159884|Q8WV48-5|CCDC107	32.75053402867276	0.3122164853807509	6				NaN	NaN	0	NaN	13815	4453	18267
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18278	45.625	NaN	1726.7	30	0	131.42	0.214			+	-1	ALMGFDLMN	9	61	514.2315911394091	1026.4486293456182	2	514.2330932617188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ALM(Oxidation (M))GFDLMN_	REV__ENSG00000137672|ENST00000344327|TRPC6;REV__nc|ENSG00000137672|Q9Y210-2|TRPC6;REV__nc|ENSG00000137672|Q9Y210-3|TRPC6;REV__TRPC6|p.G794Rfs*13|1|0.31|ENSG00000137672|chr11:101471212-101471213|-/T|frameshift_variant;REV__TRPC6|p.G794Vfs*8|1|0.27|ENSG00000137672|chr11:101471213-101471213|T/-|frameshift_variant	51.33545320467046	0.2872990594074956	6				NaN	NaN	0	NaN	13820	4456	18277
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18279	45.629	NaN	13855	30	0	2455.9	0.106				-1	 	0	64	318.19510429388373	634.3756556545675	2	318.1962890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13821	4456	18277
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18280	45.63	NaN	1368.4	30	0	296.13	0.035			+	45233	TVPPSHCLAI	10	49	519.275634765625	NaN	0	519.275634765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TVPPSHCLAI_	REV__ENSG00000102290|ENST00000682573|PCDH11X;REV__nc|ENSG00000102290|Q9BZA7-3|PCDH11X;REV__nc|ENSG00000102290|Q9BZA7-4|PCDH11X;REV__nc|ENSG00000102290|Q9BZA7-5|PCDH11X;REV__nc|ENSG00000102290|Q9BZA7-8|PCDH11X	29.14955571784316	0.4044631218331212	6				NaN	NaN	0	NaN	13822	4456	18277
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18289	45.65	NaN	18268	30	0	16259	0.214				-1	 	0	62	346.7057840110168	691.3970150888337	2	346.706787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13828	4459	18288
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18290	45.654	NaN	3639	30	0	287.97	0.106	+			30428	PYIIHTVLY	9	75	559.8161460084618	NaN	0	559.8160400390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PYIIHTVLY_	ENSG00000127481|ENST00000375254|UBR4;nc|ENSG00000127481|Q5T4S7-2|UBR4;nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000127481|Q5T4S7-4|UBR4	85.35947970620816	0.05301898140525511	6				NaN	NaN	0	NaN	13829	4459	18288
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18291	45.656	NaN	1584.8	30	0	726.37	0.106	+			25076	LLLPAGCR	8	43	421.7510928562833	NaN	0	421.7511291503906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LLLPAGCR_	ENSG00000182580|ENST00000330394|EPHB3;EPHB3|p.D878Tfs*88|1|0.03|ENSG00000182580|chr3:184581064-184581065|-/ACTGCTGGGTGTGT|frameshift_variant	23.036711822280957	1.7418937515398478	6				NaN	NaN	0	NaN	13830	4459	18288
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18292	45.658	NaN	830.04	30	0	89.782	0.106	+			47607	VRTPWVPA	8	44	463.2653503417969	NaN	0	463.2653503417969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VRTPWVPA_	ENST00000459625.5_1_12:48184825-48185932:-|nuORF;nc|ENSG00000061273|Q8WUI4-2|HDAC7	25.450171626174864	1.7418937515398478	6				NaN	NaN	0	NaN	13831	4459	18288
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18293	45.66	NaN	1963.9	30	0	162.98	0.038	+			49859	VYSRYFTTY	9	64	600.2908239779836	NaN	0	600.291015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	51.19269402634007	0.19847346126499396	6				NaN	NaN	0	NaN	13832	4459	18288
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18298	45.674	NaN	44786	30	0	38008	0.214				-1	 	0	65	326.7083870320658	651.4022211309316	2	326.7092590332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13834	4462	18297
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18299	45.678	NaN	2570.7	30	0	302.71	0.106	+			37659	SLQVEAPKDF	10	68	567.2957740494072	1132.5769951656143	2	567.7994384765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLQVEAPKDF_	ENST00000561018.5_1_15:41067168-41068598:-|nuORF	49.536043120802724	0.461275219792494	6				NaN	NaN	0	NaN	13835	4462	18297
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18300	45.68	NaN	2113.1	30	0	164.95	0.036			+	48722	VTTVILMMI	9	62	526.7904759263257	1051.5663989194513	2	526.792236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Oxidation (M)	_VTTVILM(Oxidation (M))M(Oxidation (M))I_	REV__ENSG00000163762|ENST00000296059|TM4SF18;REV__ENST00000468398.1_1_3:149047933-149051100:-|nuORF;REV__ENST00000491182.1_1_3:149042665-149051366:-|nuORF	47.91560031466742	0.327412564698279	6				NaN	NaN	0	NaN	13836	4462	18297
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18309	45.7	NaN	2005.4	30	0	119.06	0.214				-1	 	0	71	543.299532752052	542.2922562854519	1	543.3012084960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13842	4465	18308
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18310	45.703	NaN	2645.4	30	0	228.41	0.106				-1	 	0	53	329.18607089603984	656.3575888588797	2	329.1869812011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13843	4465	18308
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18311	45.705	NaN	1919	30	0	136.78	0.106				-1	 	0	47	342.65351225770723	683.2924715822145	2	342.6545104980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13844	4465	18308
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18312	45.707	NaN	3337.6	30	0	379.08	0.106				-1	PTQKALYNDVM	11	76	648.3169753850038	1294.6193978368076	2	648.8191528320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_PTQKALYNDVM(Oxidation (M))_	ENSG00000162086|ENST00000669516|ZNF75A;nc|ENSG00000162086|Q96N20|ZNF75A	36.31764250033197	0.6083289427130232	6				NaN	NaN	0	NaN	13845	4465	18308
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18313	45.709	NaN	2191.4	30	0	429.43	0.106	+			21579	KPGKEDKLF	9	63	531.302330209714	1060.590107486228	2	530.8056030273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KPGKEDKLF_	ENSG00000089094|ENST00000377071|KDM2B;KDM2B|p.R1006Gfs*37|1|0.31|ENSG00000089094|chr12:121442425-121442425|G/-|frameshift_variant;nc|ENSG00000089094|Q8NHM5-2|KDM2B;nc|ENSG00000089094|Q8NHM5-4|KDM2B	34.172542307311794	0.4838870758800184	6				NaN	NaN	0	NaN	13846	4465	18308
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18314	45.711	NaN	1877.5	30	0	139.51	0.036			+	10424	EVIRGRLET	9	59	536.8096451082013	1071.6047372832024	2	536.8162841796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EVIRGRLET_	REV__ENSG00000103152|ENST00000356432|MPG;REV__nc|ENSG00000103152|P29372-2|MPG;REV__nc|ENSG00000103152|P29372-5|MPG;REV__nc|ENSG00000103152|P29372|MPG	66.42927471994793	0.16001998865088202	6				NaN	NaN	0	NaN	13847	4465	18308
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18322	45.73	NaN	2396.4	30	0	356.38	0.214				-1	 	0	50	485.7804695883752	969.5463862435504	2	485.7818603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13852	4468	18321
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18323	45.734	NaN	1656.9	30	0	109.48	0.106	+			31928	QQPPPPPPLR	10	46	376.2197671368607	NaN	0	376.2197570800781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QQPPPPPPLR_	WASF3|p.P310Lfs*25|1|0.21|ENSG00000132970|chr13:26681262-26681262|C/-|frameshift_variant	28.081489160057373	0.40797012399963245	6				NaN	NaN	0	NaN	13853	4468	18321
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18324	45.736	NaN	1685	30	0	181.24	0.106				-1	 	0	55	391.2237645659623	780.4329761987246	2	391.22491455078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13854	4468	18321
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18325	45.738	NaN	1753.8	30	0	168.61	0.036	+			24344	LFLGRCHSF	9	67	540.278564453125	NaN	0	540.278564453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LFLGRCHSF_	nc|ENSG00000140612|P67812-3|SEC11A	35.61828744233558	0.29773779453147337	6				NaN	NaN	0	NaN	13855	4468	18321
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18332	45.754	NaN	3583.5	30	0	350.35	0.214			+	3711	ATAASLAQLRA	11	64	536.8096451082013	1071.6047372832024	2	536.8108520507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATAASLAQLRA_	REV__ENSG00000099849|ENST00000397583|RASSF7;REV__nc|ENSG00000099849|Q02833-2|RASSF7;REV__nc|ENSG00000099849|Q02833-3|RASSF7	41.42661286455405	0.5384226294179143	6				NaN	NaN	0	NaN	13859	4471	18331
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18333	45.758	NaN	1695.8	30	0	202.16	0.106			+	11490	FPANRSGKGF	10	57	540.7819213867188	NaN	0	540.7819213867188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FPANRSGKGF_	REV__ENSG00000197140|ENST00000379907|ADAM32	44.377184641726394	0.34115073642966565	6				NaN	NaN	0	NaN	13860	4471	18331
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18334	45.76	NaN	1911.9	30	0	209.04	0.036				-1	MKQIPEQKP	9	69	557.8003057292193	1113.5860585252385	2	557.802490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))KQIPEQKP_	nc|ENSG00000060237|Q9H4A3-5|WNK1;nc|ENSG00000060237|Q9H4A3-6|WNK1;nc|ENSG00000060237|Q9H4A3-7|WNK1	42.396135135203025	0.392153681582562	6				NaN	NaN	0	NaN	13861	4471	18331
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18343	45.78	NaN	5941	30	0	520.09	0.214				-1	 	0	66	538.3150245993043	1074.6154962654084	2	538.3165283203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13867	4474	18342
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18344	45.783	NaN	1756	30	0	305.37	0.106			+	45791	VAGPRPISQT	10	56	513.290141694544	1024.565730455888	2	513.2913818359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VAGPRPISQT_	REV__ENST00000486362.1_1_9:124584274-124585120:-|nuORF	34.172542307311794	0.6007644933930345	6				NaN	NaN	0	NaN	13868	4474	18342
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18345	45.785	NaN	885.65	30	0	64.983	0.034	+			41521	SVPSVLYGH	9	54	479.75222136870184	NaN	0	479.7528076171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SVPSVLYGH_	ENST00000265056.11_2_3:127340622-127340844:+|nuORF	31.954861631926434	0.3162336699109506	6				NaN	NaN	0	NaN	13869	4474	18342
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18349	45.799	NaN	11074	30	0	1167.5	0.214				-1	 	0	71	338.1924724811021	674.3703920290042	2	338.19342041015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13870	4477	18348
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18350	45.803	NaN	2670.7	30	0	440.53	0.106	+			9038	EGERRLNL	8	63	493.7728981592448	985.5312433852896	2	493.7737731933594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_EGERRLNL_	ENST00000456969.2_1_X:75555899-75556166:-|nuORF	37.81151784470057	0.6698925118251505	6				NaN	NaN	0	NaN	13871	4477	18348
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18351	45.805	NaN	1627.3	30	0	57.054	0.033				-1	 	0	58	435.2500124214238	868.4854719096476	2	435.2510986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13872	4477	18348
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18358	45.823	NaN	15908	30	0	2156.2	0.214				-1	 	0	77	536.7810031551682	1071.5474533771362	2	536.7827758789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13876	4480	18357
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18359	45.826	NaN	1475.3	30	0	180.53	0.106	+			1819	AIFSVYVVN	9	49	506.27940679133405	1010.5442606494681	2	506.2811584472656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AIFSVYVVN_	ENSG00000196655|ENST00000533632|TRAPPC4;ENST00000447216.2_1_11:118889505-118891019:+|nuORF;ENST00000531290.5_1_11:118889505-118889751:+|nuORF;nc|ENSG00000196655|Q9Y296-2|TRAPPC4;TRAPPC4|p.F32Gfs*15|1|0.07|ENSG00000196655|chr11:119018888-119018889|-/GGTA|frameshift_variant	37.15910966729921	0.4535818937225704	6				NaN	NaN	0	NaN	13877	4480	18357
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18360	45.828	NaN	1685.6	30	0	427.51	0.106			+	25806	LSCALFKI	8	49	476.2701068614958	NaN	0	476.2701110839844	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LSC(Carbamidomethyl (C))ALFKI_	REV__tr|U7SND5|U7SND5_FUSNUNucleosidetransporter/FeoBGTPaseGatedomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01804PE=4SV=1	44.116797842482775	1.7418937515398478	6				NaN	NaN	0	NaN	13878	4480	18357
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18361	45.83	NaN	1491.4	30	0	240.47	0.106	+			49771	VYQKKTQLK	9	43	379.2320556640625	NaN	0	379.2320556640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_VYQKKTQLK_	TOP2B|p.E62K|1|0.3|ENSG00000077097|chr3:25645356-25645356|C/T|missense_variant	30.317721548370564	0.32449924987115025	6				NaN	NaN	0	NaN	13879	4480	18357
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18362	45.832	NaN	1389	30	0	104.06	0.106	+			2777	ARPGVSVWR	9	46	343.19766570240824	NaN	0	343.1977233886719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ARPGVSVWR_	ENST00000441890.5_1_1:154193404-154197599:+|nuORF	24.519189625965996	0.35377483217337163	6				NaN	NaN	0	NaN	13880	4480	18357
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18363	45.834	NaN	1428.7	30	0	146.49	0.031	+			30039	PPSELQIGLK	10	56	361.21430959145545	NaN	0	361.2139892578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_PPSELQIGLK_	ENST00000568857.5_3_16:84164853-84177949:-|nuORF	21.9598887501803	0.4201028297492154	6				NaN	NaN	0	NaN	13881	4480	18357
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18369	45.85	NaN	2598.1	30	0	651.06	0.214	+			30000	PPHNLGELVD	10	66	545.7799545992656	1089.545356265331	2	545.7824096679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PPHNLGELVD_	tr|U7T2L6|U7T2L6_FUSNUDNAgyrasesubunitAOS=FusobacteriumnucleatumCTI-5OX=1316586GN=gyrAPE=3SV=1	37.81151784470057	0.569310847604193	6				NaN	NaN	0	NaN	13884	4483	18368
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18370	45.853	NaN	1082.5	30	0	102.51	0.106	+			9636	ELRNLVPLL	9	41	356.2256210465558	NaN	0	356.2259826660156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ELRNLVPLL_	ENSG00000119787|ENST00000378954|ATL2;nc|ENSG00000119787|Q8NHH9-2|ATL2;nc|ENSG00000119787|Q8NHH9-3|ATL2;nc|ENSG00000119787|Q8NHH9-4|ATL2;nc|ENSG00000119787|Q8NHH9-5|ATL2	25.57405402267927	0.3484490411150625	6				NaN	NaN	0	NaN	13885	4483	18368
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18371	45.855	NaN	1446	30	0	178.46	0.034			+	17826	IFAWRYIQFLP	11	53	485.27114080178427	NaN	0	485.27142333984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IFAWRYIQFLP_	REV__ENSG00000142197|ENST00000691173|DOP1B;REV__nc|ENSG00000142197|Q9Y3R5-2|DOP1B	31.634271133179894	0.4244354679066847	6				NaN	NaN	0	NaN	13886	4483	18368
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18378	45.871	NaN	978.72	30	0	99.651	0.214	+			7884	DRQGSGPRG	9	39	465.2318829971781	NaN	0	465.232421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DRQGSGPRG_	ENST00000569674.1_1_1:108743179-108743308:-|nuORF	23.52269567125451	0.3573684076213556	6				NaN	NaN	0	NaN	13890	4486	18377
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18379	45.875	NaN	1571.4	30	0	154.3	0.031			+	37428	SLGSTKRSRS	10	47	360.2058319107611	NaN	0	360.2058410644531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLGSTKRSRS_	REV__ENSG00000106617|ENST00000287878|PRKAG2;REV__ENST00000481434.5_1_7:151372433-151573717:-|nuORF;REV__nc|ENSG00000106617|Q9UGJ0-3|PRKAG2;REV__PRKAG2|p.K291Rfs*7|1|0.58|ENSG00000106617|chr7:151576445-151576445|T/-|frameshift_variant	19.996771675451527	0.4201028297492154	6				NaN	NaN	0	NaN	13891	4486	18377
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18384	45.89	NaN	3082.6	30	0	373.66	0.214	+			12049	FYTVIPHNF	9	67	569.2899643792878	NaN	0	569.2907104492188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FYTVIPHNF_	ENSG00000041880|ENST00000398755|PARP3;nc|ENSG00000041880|Q9Y6F1-2|PARP3	61.691277971877994	0.14210560126578747	6				NaN	NaN	0	NaN	13893	4489	18383
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18385	45.893	NaN	2504.2	30	0	238.01	0.035	+			23659	LARVLRPR	8	56	490.8275068236343	979.6404607140686	2	490.8283996582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LARVLRPR_	ENST00000380191.8_1_10:5855216-5855492:-|nuORF	55.50420428727701	0.5462892107279674	6				NaN	NaN	0	NaN	13894	4489	18383
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18389	45.907	NaN	3498.4	30	0	518.78	0.143			+	42127	SYLRRRGL	8	58	510.8066760202089	1019.5987991072178	2	510.8087158203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SYLRRRGL_	REV__ENST00000589935.1_1_18:54318575-54318788:+|nuORF	31.954861631926434	0.7126016770032289	6				NaN	NaN	0	NaN	13895	4492	18388
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18394	45.924	NaN	2633.4	30	0	171.61	0.214				-1	 	0	66	457.26310935181687	912.5116657704338	2	457.2640686035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13897	4495	18393
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18395	45.927	NaN	3919.3	30	0	780.97	0.106				-1	AGRVGCKELK	10	50	373.20987774270935	NaN	0	373.209716796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_AGRVGC(Carbamidomethyl (C))KELK_	ENST00000412565.2_3_14:24024951-24025206:-|nuORF	35.15202426646627	0.38475398474706135	6				NaN	NaN	0	NaN	13898	4495	18393
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18396	45.929	NaN	2067	30	0	211.63	0.106	+			36176	SELILLQKV	9	66	521.8274754452225	1041.6403979572449	2	521.829345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SELILLQKV_	ENSG00000136261|ENST00000258761|BZW2	77.31757898189308	0.1091473830098891	6				NaN	NaN	0	NaN	13899	4495	18393
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18397	45.931	NaN	1220.3	30	0	140.08	0.106				-1	 	0	52	472.74611338442924	943.4776738356585	2	473.249267578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13900	4495	18393
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18398	45.933	NaN	1346.3	30	0	168.87	0.036			+	11881	FTLLIDIID	9	54	531.8082067235949	NaN	0	531.8089599609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_FTLLIDIID_	REV__ENSG00000164944|ENST00000297591|VIRMA;REV__ENST00000521080.5_1_8:95511544-95524374:-|nuORF;REV__nc|ENSG00000164944|Q69YN4-2|VIRMA;REV__nc|ENSG00000164944|Q69YN4-3|VIRMA;REV__nc|ENSG00000164944|Q69YN4-4|VIRMA	30.503639358989545	0.3235605894931338	6				NaN	NaN	0	NaN	13901	4495	18393
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18403	45.948	NaN	2740.1	30	0	603.07	0.145	+			11280	FKAGSQSFPPK	11	75	597.3194196515132	1192.6242863698262	2	597.8222045898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FKAGSQSFPPK_	ENSG00000185792|ENST00000332836|NLRP9;nc|ENSG00000185792|Q7RTR0-2|NLRP9	38.753607047826485	0.5749975102143227	6				NaN	NaN	0	NaN	13903	4498	18402
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18411	45.969	NaN	7709.1	30	0	1340.4	0.214				-1	 	0	47	318.19510429388373	634.3756556545675	2	318.1963806152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13908	4501	18410
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18412	45.973	NaN	2967.2	30	0	456.54	0.036				-1	 	0	61	539.8044828862819	1077.5944128393637	2	539.8064575195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13909	4501	18410
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18421	45.993	NaN	3955.8	30	0	750.29	0.214			+	7019	CSASKCDE	8	56	450.1657201301329	898.3168873270658	2	450.16680908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_C(Carbamidomethyl (C))SASKCDE_	REV__ENSG00000188107|ENST00000503581|EYS;REV__EYS|p.C952Lfs*2|1|0.27|ENSG00000188107|chr6:64886834-64886835|-/A|frameshift_variant;REV__EYS|p.E1830Rfs*16|1|0.31|ENSG00000188107|chr6:64590379-64590380|-/T|frameshift_variant;REV__EYS|p.F2463Rfs*16|1|0.05|ENSG00000188107|chr6:63806214-63806215|-/AAGACCT|frameshift_variant;REV__EYS|p.G2248Wfs*10|1|0.08|ENSG00000188107|chr6:63999167-63999168|-/A|frameshift_variant;REV__EYS|p.N1413Tfs*15|1|0.21|ENSG00000188107|chr6:64591629-64591629|T/-|frameshift_variant;REV__EYS|p.N692Mfs*37|1|0.42|ENSG00000188107|chr6:65057676-65057676|T/-|frameshift_variant;REV__EYS|p.P1875Lfs*4|1|0.23|ENSG00000188107|chr6:64590243-64590243|G/-|frameshift_variant;REV__nc|ENSG00000188107|Q5T1H1|EYS	44.116797842482775	0.6307669463330267	6				NaN	NaN	0	NaN	13915	4504	18420
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18422	45.997	NaN	2304.9	30	0	227.17	0.106	+			10901	FDDLPARFGY	10	75	600.7918539351532	NaN	0	600.7920532226562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FDDLPARFGY_	ENSG00000082996|ENST00000392894|RNF13;ENST00000491086.5_1_3:149531035-149619859:+|nuORF;RNF13|p.G168Afs*5|1|0.19|ENSG00000082996|chr3:149902156-149902156|A/-|frameshift_variant;RNF13|p.L223Ffs*46|1|0.02|ENSG00000082996|chr3:149921193-149921194|-/TT|frameshift_variant	49.44154591367651	0.30913310806145605	6				NaN	NaN	0	NaN	13916	4504	18420
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18423	45.999	NaN	2099.6	30	0	1185	0.106				-1	 	0	30	346.7057840110168	691.3970150888337	2	346.706787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13917	4504	18420
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18424	46	NaN	1743.8	30	0	142.55	0.036			+	-1	MSPDEIVSLN	10	61	560.7633823587104	NaN	0	560.7620849609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_M(Oxidation (M))SPDEIVSLN_	REV__ENSG00000166396|ENST00000398019|SERPINB7;REV__nc|ENSG00000166396|O75635-2|SERPINB7	39.252832667884924	0.37128895876774715	6				NaN	NaN	0	NaN	13918	4504	18420
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18433	46.032	NaN	3667.9	30	0	499.32	0.214			+	-1	YRDNAMASL	9	68	528.7428614267925	1055.471169920385	2	528.745361328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_YRDNAM(Oxidation (M))ASL_	REV__OR8K5|p.Y120N|1|0.14|ENSG00000181752|chr11:56159960-56159960|A/T|missense_variant	53.351449002276354	0.2690372970092375	6				NaN	NaN	0	NaN	13921	4510	18432
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18434	46.035	NaN	1147.9	30	0	248.23	0.034				-1	DCLDPDCC	8	51	470.6490409330387	NaN	0	470.6501159667969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_DC(Carbamidomethyl (C))LDPDCC_	ENSG00000145934|ENST00000518659|TENM2;ENST00000521126.1_1_5:167589722-167617553:+|nuORF;nc|ENSG00000145934|Q9NT68-2|TENM2;TENM2|p.L1355*|1|0.14|ENSG00000145934|chr5:168215255-168215255|C/-|frameshift_variant;TENM2|p.L1667Hfs*17|1|0.05|ENSG00000145934|chr5:168218890-168218891|-/ATCAGCGT|frameshift_variant;TENM2|p.N1524Tfs*20|1|0.1|ENSG00000145934|chr5:168218458-168218458|A/-|frameshift_variant	20.481830146152948	1.741893751539848	6				NaN	NaN	0	NaN	13922	4510	18432
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18441	46.066	NaN	3219.6	30	0	158.1	0.214				-1	 	0	70	413.2369631148472	824.4593732964944	2	413.2379455566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13923	4516	18440
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18442	46.069	NaN	1297.5	30	0	180.61	0.106	+			50907	YGGGFGGGGF	10	46	438.18746415891326	NaN	0	438.1875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YGGGFGGGGF_	CON__P02535-1;REV__CON__Q6IFZ6	44.53106598305862	0.34017787621393314	6				NaN	NaN	0	NaN	13924	4516	18440
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18443	46.071	NaN	2110.8	30	0	170.52	0.106	+			43509	TGSKPRTSANS	11	62	553.283898313358	1104.553243693516	2	553.2858276367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TGSKPRTSANS_	ENSG00000129292|ENST00000395386|PHF20L1;ENST00000361997.9_1_8:133790074-133829825:+|nuORF;ENST00000395374.1_1_8:133816039-133823376:+|nuORF;ENST00000395383.5_1_8:133790074-133836319:+|nuORF;nc|ENSG00000129292|A8MW92-2|PHF20L1;nc|ENSG00000129292|A8MW92-4|PHF20L1;PHF20L1|p.E981Gfs*15|1|0.18|ENSG00000129292|chr8:132845806-132845807|-/G|frameshift_variant;PHF20L1|p.K574Rfs*28|1|0.31|ENSG00000129292|chr8:132825341-132825341|A/-|frameshift_variant;PHF20L1|p.N322Mfs*42|5|0.3|ENSG00000129292|chr8:132814664-132814664|A/-|frameshift_variant;PHF20L1|p.V535*|4|0.38|ENSG00000129292|chr8:132824019-132824019|A/-|frameshift_variant	45.02220120713402	0.4892240028381124	6				NaN	NaN	0	NaN	13925	4516	18440
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18444	46.073	NaN	1218.1	30	0	150.71	0.106	+			29301	NYLNFSSL	8	51	479.2374752464042	NaN	0	479.23773193359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NYLNFSSL_	ENSG00000144824|ENST00000431670|PHLDB2;nc|ENSG00000144824|Q86SQ0-2|PHLDB2;nc|ENSG00000144824|Q86SQ0-3|PHLDB2;PHLDB2|p.K1064Nfs*28|1|0.29|ENSG00000144824|chr3:111967696-111967696|A/-|frameshift_variant;PHLDB2|p.K665Rfs*6|1|0.22|ENSG00000144824|chr3:111920409-111920409|A/-|frameshift_variant;PHLDB2|p.P552Hfs*18|1|0.06|ENSG00000144824|chr3:111913637-111913638|-/AT|frameshift_variant;PHLDB2|p.S734Ifs*5|1|0.07|ENSG00000144824|chr3:111939544-111939545|-/TAACT|frameshift_variant;PHLDB2|p.V822Lfs*6|1|0.1|ENSG00000144824|chr3:111945316-111945316|G/-|frameshift_variant	29.14955571784316	1.7418937515398478	6				NaN	NaN	0	NaN	13926	4516	18440
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18445	46.075	NaN	1416.3	30	0	126.1	0.106			+	27577	MPHKAKFIN	9	65	543.3016475452736	NaN	0	543.3012084960938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_MPHKAKFIN_	REV__ENSG00000183020|ENST00000448903|AP2A2;REV__ENST00000531497.1_1_11:1009067-1009919:+|nuORF;REV__nc|ENSG00000183020|O94973-2|AP2A2	37.15910966729921	0.2899585034171616	6				NaN	NaN	0	NaN	13927	4516	18440
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18446	46.077	NaN	1658.4	30	0	215.78	0.106			+	51318	YSLALNYS	8	53	465.73505012962846	NaN	0	466.1475524902344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_YSLALNYS_	REV__ENSG00000070915|ENST00000563236|SLC12A3;REV__nc|ENSG00000070915|P55017-2|SLC12A3;REV__nc|ENSG00000070915|P55017-3|SLC12A3	35.61828744233558	1.7418937515398478	6				NaN	NaN	0	NaN	13928	4516	18440
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18447	46.078	NaN	994.49	30	0	97.315	0.036			+	13449	GLIGPSGV	8	40	350.2065535455469	NaN	0	350.20648193359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_GLIGPSGV_	REV__ENST00000393784.7_1_5:172377848-172378373:+|nuORF	39.021493756699265	1.7418937515398478	6				NaN	NaN	0	NaN	13929	4516	18440
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18451	46.093	NaN	1800.7	30	0	230.03	0.214				-1	 	0	56	504.2997865713163	503.2925101047163	1	504.30010986328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13930	4519	18450
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18452	46.096	NaN	1162.5	30	0	80.998	0.032			+	33874	RRLPTSTPFP	10	39	391.22479248046875	NaN	0	391.22479248046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RRLPTSTPFP_	REV__CHAF1A|p.A486Lfs*24|1|0.09|ENSG00000167670|chr19:4428742-4428742|G/-|frameshift_variant;REV__CHAF1A|p.K459Rfs*51|1|0.22|ENSG00000167670|chr19:4423867-4423867|C/-|frameshift_variant;REV__ENSG00000167670|ENST00000301280|CHAF1A;REV__nc|ENSG00000167670|Q13111-2|CHAF1A;REV__nc|ENSG00000167670|Q13111-3|CHAF1A	28.081489160057373	0.40797012399963245	6				NaN	NaN	0	NaN	13931	4519	18450
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18460	46.116	NaN	1837.6	30	0	165.38	0.212			+	24387	LFTPSHDNIDK	11	64	643.822556455831	1285.6305599784619	2	643.8247680664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LFTPSHDNIDK_	REV__ENSG00000120327|ENST00000239449|PCDHB14	22.579656572578934	0.7529490144093228	6				NaN	NaN	0	NaN	13936	4522	18459
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18461	46.12	NaN	1608.9	30	0	115.5	0.106			+	11125	FFVRAPVLM	9	56	548.3059886905965	1094.5974244479928	2	548.3080444335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_FFVRAPVLM(Oxidation (M))_	REV__ENSG00000189339|ENST00000617444|SLC35E2B;REV__ENST00000480991.1_1_1:1597223-1601267:-|nuORF	50.0245360154114	0.3026755932229825	6				NaN	NaN	0	NaN	13937	4522	18459
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18462	46.121	NaN	2532.9	30	0	358.06	0.106	+			45633	TYQTTLLHF	9	66	562.2912245806707	1122.5678962281413	2	562.2919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TYQTTLLHF_	ENSG00000003147|ENST00000402384|ICA1;ENST00000562640.1_1_16:22010196-22010523:+|nuORF;ICA1|p.E307Lfs*26|1|0.05|ENSG00000003147|chr7:8141801-8141802|-/TTTTTCAA|frameshift_variant;nc|ENSG00000003147|Q05084-2|ICA1;nc|ENSG00000003147|Q05084-3|ICA1	60.11826168202944	0.21262886028301267	6				NaN	NaN	0	NaN	13938	4522	18459
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18463	46.123	NaN	1567	30	0	239.61	0.036			+	-1	FESGECKMK	9	66	558.2473976296093	1114.4802423260185	2	558.2490844726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_FESGEC(Carbamidomethyl (C))KMK_	REV__ABCA9|p.F1166Lfs*5|1|0.33|ENSG00000154258|chr17:68995952-68995952|A/-|frameshift_variant;REV__ABCA9|p.L1080*|1|0.43|ENSG00000154258|chr17:69008144-69008144|A/-|frameshift_variant;REV__ABCA9|p.P1249Qfs*18|1|0.17|ENSG00000154258|chr17:68990930-68990930|A/-|frameshift_variant;REV__ENSG00000154258|ENST00000340001|ABCA9;REV__ENST00000461623.1_1_17:67029858-67045457:-|nuORF;REV__nc|ENSG00000154258|Q8IUA7-2|ABCA9;REV__nc|ENSG00000154258|Q8IUA7-3|ABCA9;REV__nc|ENSG00000154258|Q8IUA7-4|ABCA9;REV__nc|ENSG00000154258|Q8IUA7-5|ABCA9	34.172542307311794	0.4838870758800184	6				NaN	NaN	0	NaN	13939	4522	18459
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18468	46.138	NaN	5805.3	30	0	375.27	0.214				-1	 	0	85	435.2500124214238	868.4854719096476	2	435.2510681152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13941	4525	18467
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18469	46.141	NaN	2682.5	30	0	241.34	0.106				-1	 	0	50	338.1924776951814	337.18520122858143	1	338.1934509277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13942	4525	18467
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18470	46.143	NaN	1950.8	30	0	166.26	0.036			+	27441	MLHTALCMH	9	54	528.7428614267925	1055.471169920385	2	528.7447509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_MLHTALCMH_	REV__ENSG00000103599|ENST00000335894|IQCH	33.51558372728122	0.4900267029546261	6				NaN	NaN	0	NaN	13943	4525	18467
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18478	46.162	NaN	3137	30	0	690.17	0.145	+			1250	AERQTRQTK	9	52	373.20987774270935	NaN	0	373.2098693847656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AERQTRQTK_	ENSG00000047644|ENST00000380861|WWC3	33.921630207806714	0.3063038642147651	6				NaN	NaN	0	NaN	13948	4528	18477
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18484	46.18	NaN	3324	30	0	325.54	0.214				-1	 	0	68	536.7810031551682	1071.5474533771362	2	536.783935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13951	4531	18483
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18485	46.183	NaN	1684.4	30	0	207.54	0.036			+	37832	SNALSVQLPV	10	44	343.19766570240824	NaN	0	343.1975402832031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SNALSVQLPV_	REV__ENSG00000268964|ENST00000601417|ERVV-2;REV__ENSG00000269526|ENST00000602168|ERVV-1	27.047317107675042	0.41136583337917604	6				NaN	NaN	0	NaN	13952	4531	18483
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18492	46.201	NaN	7499.1	30	0	1945.4	0.214			+	33889	RRQISCDRG	9	68	545.7799545992656	1089.545356265331	2	545.7820434570312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RRQISCDRG_	REV__ACACB|p.L1398Sfs*26|1|0.18|ENSG00000076555|chr12:109233795-109233795|C/-|frameshift_variant;REV__ACACB|p.T1476Hfs*7|1|0.28|ENSG00000076555|chr12:109235620-109235621|-/T|frameshift_variant;REV__ENSG00000076555|ENST00000338432|ACACB;REV__ENST00000543080.1_1_12:109613818-109617755:+|nuORF;REV__nc|ENSG00000076555|O00763-2|ACACB;REV__nc|ENSG00000076555|O00763-3|ACACB	44.116797842482775	0.37197099687881774	6				NaN	NaN	0	NaN	13956	4534	18491
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18493	46.205	NaN	3618.1	30	0	201.02	0.031				-1	 	0	68	377.2263957492507	752.4382385653014	2	377.2275695800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13957	4534	18491
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18499	46.22	NaN	5534.7	30	0	1664.9	0.214	+			19552	KCKQCGKTI	9	59	504.7702598297009	1007.5259667262018	2	504.7714538574219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KCKQCGKTI_	ENSG00000168661|ENST00000601142|ZNF30;ENST00000601957.5_1_19:35433558-35435739:+|nuORF;nc|ENSG00000168661|P17039-2|ZNF30;ZNF30|p.K600Nfs*16|4|0.2|ENSG00000168661|chr19:34944761-34944761|A/-|frameshift_variant	82.24051045832904	0.08786059719216216	6				NaN	NaN	0	NaN	13960	4537	18498
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18500	46.223	NaN	5325	30	0	1134.3	0.106			+	-1	GVMFIIRR	8	43	336.5344378546052	NaN	0	336.5343017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_GVM(Oxidation (M))FIIRR_	REV__ENST00000479537.5_1_7:140434399-140447180:-|nuORF	26.79610172149135	1.7418937515398478	6				NaN	NaN	0	NaN	13961	4537	18498
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18501	46.225	NaN	1128.4	30	0	167.2	0.031				-1	 	0	38	356.2266766085133	355.2194001419133	1	356.2255554199219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13962	4537	18498
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18508	46.243	NaN	4730.3	30	0	384.64	0.215	+			45660	TYVSGMLRF	9	64	537.2759283518714	1072.5373037705426	2	537.2786254882812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TYVSGMLRF_	ENSG00000111666|ENST00000229266|CHPT1;ENST00000550385.1_1_12:102090725-102108674:+|nuORF;nc|ENSG00000111666|Q8WUD6-2|CHPT1	74.1650062923329	0.12277912660386392	6				NaN	NaN	0	NaN	13966	4540	18507
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18509	46.247	NaN	2124	30	0	448.94	0.106	+			29340	NYTLVSHLI	9	61	530.2940532609083	1058.5735535886165	2	530.2962036132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NYTLVSHLI_	ENSG00000166986|ENST00000262027|MARS1;ENST00000537638.6_1_12:57905855-57911076:+|nuORF;ENST00000548630.1_1_12:57906018-57906171:+|nuORF	84.9155231211612	0.07920012719736333	6				NaN	NaN	0	NaN	13967	4540	18507
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18510	46.249	NaN	3423.3	30	0	325.36	0.106				-1	 	0	71	560.8199914782581	1119.625430023316	2	560.822509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13968	4540	18507
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18511	46.251	NaN	1310.9	30	0	123.72	0.035			+	29300	NYLNEPKL	8	56	495.7646426361509	989.5147323391018	2	495.76568603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NYLNEPKL_	REV__ENSG00000064989|ENST00000392370|CALCRL	52.936696900407355	0.5717071646657654	6				NaN	NaN	0	NaN	13969	4540	18507
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18517	46.267	NaN	2065.8	30	0	178.97	0.214				-1	 	0	70	457.26310935181687	912.5116657704338	2	457.2640380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13972	4543	18516
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18518	46.27	NaN	1685	30	0	661.01	0.106			+	35411	SAQSLAPAGAL	11	38	329.18330227533113	NaN	0	329.18328857421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SAQSLAPAGAL_	REV__ENSG00000064607|ENST00000452918|SUGP2;REV__ENST00000598240.1_1_19:19105804-19136912:-|nuORF	20.030474535948922	0.456735970842152	6				NaN	NaN	0	NaN	13973	4543	18516
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18519	46.272	NaN	4365.4	30	0	1126.6	0.106				-1	SLQTVPMTLL	10	54	373.5428535387714	1117.6067312165142	3	373.54449462890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_SLQTVPM(Oxidation (M))TLL_	PRSS53|p.V436M|1|0.3|ENSG00000151006|chr16:31084677-31084677|C/T|missense_variant	19.262678746197807	0.7185678156885812	6				NaN	NaN	0	NaN	13974	4543	18516
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18520	46.274	NaN	1143.3	30	0	141.98	0.034	+			6429	AVVSVIFLK	9	45	488.31543109938406	NaN	0	488.31494140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AVVSVIFLK_	ENSG00000139324|ENST00000266712|TMTC3;nc|ENSG00000139324|Q6ZXV5|TMTC3;TMTC3|p.C759Mfs*3|1|0.29|ENSG00000139324|chr12:88195171-88195172|-/A|frameshift_variant;TMTC3|p.K758Nfs*31|1|0.16|ENSG00000139324|chr12:88195172-88195172|A/-|frameshift_variant;TMTC3|p.S400Kfs*4|1|0.42|ENSG00000139324|chr12:88172739-88172740|-/A|frameshift_variant	71.29570347882199	0.10120983364817086	6				NaN	NaN	0	NaN	13975	4543	18516
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18525	46.289	NaN	4313.1	30	0	316.82	0.214	+			23313	KYQDILNEI	9	85	568.3026655621487	1134.5907781910973	2	568.3049926757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KYQDILNEI_	ENSG00000145703|ENST00000274364|IQGAP2;IQGAP2|p.Q1499Rfs*15|1|0.05|ENSG00000145703|chr5:76701201-76701202|-/CCGAG|frameshift_variant;nc|ENSG00000145703|Q13576-2|IQGAP2;nc|ENSG00000145703|Q13576-3|IQGAP2	78.26377905018397	0.10505600812668463	6				NaN	NaN	0	NaN	13977	4546	18524
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18526	46.292	NaN	1396.3	30	0	228.99	0.035				-1	LSVELHSDM	9	58	523.7451171875	NaN	0	523.7451171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LSVELHSDM(Oxidation (M))_	ENSG00000110799|ENST00000261405|VWF	37.15910966729921	0.2899585034171616	6				NaN	NaN	0	NaN	13978	4546	18524
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18533	46.309	NaN	2896.7	30	0	459.88	0.215			+	-1	QSGTKKVKM	9	63	511.78714957476296	1021.559746216326	2	511.7889099121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_QSGTKKVKM(Oxidation (M))_	REV__ENSG00000085741|ENST00000322563|WNT11	36.446750945000026	0.4619375763483977	6				NaN	NaN	0	NaN	13982	4549	18532
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18534	46.312	NaN	2697.4	30	0	308.67	0.106				-1	 	0	64	539.8044828862819	1077.5944128393637	2	539.807373046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13983	4549	18532
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18535	46.314	NaN	1655	30	0	457.51	0.03			+	42757	TDRPSLLSP	9	44	329.18330227533113	NaN	0	329.1833190917969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TDRPSLLSP_	REV__ENST00000381867.5_2_20:1276831-1277038:+|nuORF	30.317721548370564	0.32449924987115025	6				NaN	NaN	0	NaN	13984	4549	18532
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18543	46.334	NaN	2652.9	30	0	153.5	0.214				-1	 	0	65	360.2054697731293	718.3963866130587	2	360.20660400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	13989	4552	18542
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18544	46.337	NaN	5334	30	0	804.75	0.106			+	16651	HIAKHEEAAE	10	77	567.7808055129769	1133.5470580927538	2	567.7825317382812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HIAKHEEAAE_	REV__ENSG00000223591|ENST00000602548|CENPVL1;REV__ENSG00000224109|ENST00000417339|CENPVL3;REV__ENSG00000283093|ENST00000634648|CENPVL2	54.776311868738084	0.41334902933431344	6				NaN	NaN	0	NaN	13990	4552	18542
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18545	46.339	NaN	1727.9	30	0	118.2	0.106	+			7116	DAAGDRLFATY	11	64	600.2884457982448	1198.5623386632894	2	600.2908935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_DAAGDRLFATY_	ENSG00000132518|ENST00000254854|GUCY2D	36.446750945000026	0.6065623449959539	6				NaN	NaN	0	NaN	13991	4552	18542
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18546	46.341	NaN	1429.2	30	0	97.304	0.036			+	30404	PVSVMSYRI	9	64	526.2851849002119	NaN	0	526.2844848632812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PVSVMSYRI_	REV__ENSG00000078898|ENST00000170150|BPIFB2	27.882242232435846	0.3367954786602879	6				NaN	NaN	0	NaN	13992	4552	18542
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18560	46.378	NaN	2370.3	30	0	161.97	0.212	+			8109	DYLKRFYLY	9	73	640.8352976447084	1279.6560423562166	2	640.8372802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DYLKRFYLY_	ENSG00000137673|ENST00000260227|MMP7;ENST00000531200.1_1_11:102398162-102401431:-|nuORF;ENST00000533366.5_1_11:102395628-102401431:-|nuORF;MMP7|p.A35V|1|0.2|ENSG00000137673|chr11:102530597-102530597|G/A|missense_variant;MMP7|p.N51Mfs*5|2|0.18|ENSG00000137673|chr11:102527940-102527940|T/-|frameshift_variant	64.20726635412375	0.17854274437659667	6				NaN	NaN	0	NaN	14000	4558	18559
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18561	46.381	NaN	1739.4	30	0	312.47	0.035	+			25732	LRSQEDLK	8	56	494.77519111103925	987.5358292888785	2	494.7769775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LRSQEDLK_	ENSG00000109061|ENST00000226207|MYH1;ENSG00000125414|ENST00000245503|MYH2	35.61828744233558	0.6843154725607303	6				NaN	NaN	0	NaN	14001	4558	18559
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18568	46.399	NaN	5051.5	30	0	724.8	0.214				-1	 	0	66	382.2185288531111	762.4225047730222	2	382.2196044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14005	4561	18567
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18569	46.403	NaN	3059.7	30	0	1155.8	0.106				-1	 	0	59	368.71883527724805	735.4231176212961	2	368.7200927734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14006	4561	18567
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18570	46.405	NaN	2814.4	30	0	242.79	0.036	+			11418	FLRMWGPGR	9	70	560.297789909214	NaN	0	560.2969970703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FLRMWGPGR_	ENST00000394224.3_1_11:65407601-65408454:+|nuORF	53.351449002276354	0.18359631779194618	6				NaN	NaN	0	NaN	14007	4561	18567
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18576	46.421	NaN	8471.2	30	0	5947.2	0.214				-1	 	0	59	390.7318083630632	779.4490637929264	2	390.7328796386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14010	4564	18575
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18577	46.425	NaN	3559	30	0	693.5	0.106				-1	 	0	58	372.2260230793865	742.437493225573	2	372.22650146484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14011	4564	18575
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18578	46.427	NaN	5299.2	30	0	1291.7	0.106				-1	VMDDQYRTL	9	67	578.768904457668	1155.5232559821359	2	578.7711791992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_VM(Oxidation (M))DDQYRTL_	DNHD1|p.R1358Afs*11|1|0.16|ENSG00000179532|chr11:6545007-6545007|C/-|frameshift_variant;DNHD1|p.S3597Rfs*6|1|0.1|ENSG00000179532|chr11:6565718-6565719|-/AG|frameshift_variant;DNHD1|p.T4259Pfs*33|2|0.33|ENSG00000179532|chr11:6568772-6568772|C/-|frameshift_variant;ENSG00000179532|ENST00000254579|DNHD1	39.252832667884924	0.4290233611298554	6				NaN	NaN	0	NaN	14012	4564	18575
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18579	46.428	NaN	2286.5	30	0	230.03	0.106	+			28117	NAIHAILLY	9	58	514.2986501085271	1026.5827472838541	2	514.3004150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NAIHAILLY_	ENSG00000110090|ENST00000265641|CPT1A;nc|ENSG00000110090|P50416-2|CPT1A	57.81127852772723	0.2318599694398087	6				NaN	NaN	0	NaN	14013	4564	18575
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18580	46.43	NaN	2795.8	30	0	448.25	0.106			+	21309	KLSTFDLAL	9	69	504.2927505285417	NaN	0	504.29315185546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_KLSTFDLAL_	REV__ENSG00000277161|ENST00000614443|PIGW	45.97224482568171	0.23445038899310136	6				NaN	NaN	0	NaN	14014	4564	18575
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18581	46.432	NaN	3246.3	30	0	325.84	0.106			+	49405	VVTMLKEELR	10	76	609.3500274748117	1216.6855020164232	2	609.3519287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_VVTMLKEELR_	REV__ENSG00000149782|ENST00000279230|PLCB3;REV__PLCB3|p.R918Afs*95|5|0.32|ENSG00000149782|chr11:64265045-64265045|C/-|frameshift_variant	37.81151784470057	0.569310847604193	6				NaN	NaN	0	NaN	14015	4564	18575
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18582	46.434	NaN	1964.1	30	0	168.64	0.037	+			17488	IDAGMLNVLPQ	11	63	585.8115887044901	1169.60862447578	2	585.8140258789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_IDAGMLNVLPQ_	ENSG00000185467|ENST00000327442|KPNA7	29.170058357718403	0.683821074385409	6				NaN	NaN	0	NaN	14016	4564	18575
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18587	46.448	NaN	3384	30	0	276.05	0.214	+			9673	ELTVLDKCR	9	68	538.7927848342405	1075.5710167352809	2	538.7947387695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ELTVLDKCR_	ENST00000548527.5_2_12:104238192-104276310:-|nuORF;ENST00000551270.1_1_12:104237536-104277386:-|nuORF;nc|ENSG00000214198|Q6P2S7-2|TTC41P;nc|ENSG00000214198|Q6P2S7|TTC41P	42.396135135203025	0.392153681582562	6				NaN	NaN	0	NaN	14018	4567	18586
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18588	46.452	NaN	2315.4	30	0	229.93	0.106			+	2180	ALMLARICD	9	47	503.26463973223986	1004.5147265312797	2	503.2663879394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ALMLARICD_	REV__ENSG00000164236|ENST00000296657|ANKRD33B	47.91560031466742	0.327412564698279	6				NaN	NaN	0	NaN	14019	4567	18586
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18589	46.454	NaN	1583.1	30	0	169.79	0.106	+			39333	STAVVVAELLK	11	66	565.3453128969803	NaN	0	565.345947265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_STAVVVAELLK_	ENSG00000117620|ENST00000533028|SLC35A3;nc|ENSG00000283761|Q9Y2D2-2|SLC35A3;nc|ENSG00000283761|Q9Y2D2-3|SLC35A3	79.48907831485694	0.08470397759613367	6				NaN	NaN	0	NaN	14020	4567	18586
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18590	46.456	NaN	1413.3	30	0	227.66	0.034	+			32768	RARANPQL	8	48	463.2697495556685	924.524946178137	2	463.2705993652344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_RARANPQL_	ENSG00000128335|ENST00000358502|APOL2	26.79610172149135	0.7524337208463756	6				NaN	NaN	0	NaN	14021	4567	18586
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18599	46.477	NaN	6158.4	30	0	423.15	0.214				-1	 	0	72	435.2500124214238	868.4854719096476	2	435.2511291503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14027	4570	18598
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18600	46.481	NaN	1249.8	30	0	66.613	0.106				-1	 	0	37	338.1924776951814	337.18520122858143	1	338.1934814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14028	4570	18598
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18601	46.483	NaN	1236.2	30	0	98.307	0.036				-1	 	0	62	543.298567239275	542.291290772675	1	543.3007202148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14029	4570	18598
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18608	46.501	NaN	2098.8	30	0	420.18	0.214			+	45003	TVEGRTRR	8	53	487.7778226845509	973.5410924359019	2	487.77850341796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVEGRTRR_	REV__ENST00000372857.7_1_1:40042222-40042411:-|nuORF;REV__ENST00000451091.2_1_1:40041726-40042411:-|nuORF;REV__ENST00000531243.2_1_1:40041622-40042411:-|nuORF	39.252832667884924	0.6609488554722044	6				NaN	NaN	0	NaN	14033	4573	18607
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18609	46.504	NaN	1684.9	30	0	131.8	0.035			+	6281	AVSSPLTTVL	10	57	494.2892414063603	NaN	0	494.28814697265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVSSPLTTVL_	REV__ENSG00000181143|ENST00000397910|MUC16;REV__MUC16|p.F10843Sfs*11|1|0.22|ENSG00000181143|chr19:8938427-8938427|A/-|frameshift_variant;REV__MUC16|p.K6604Rfs*26|1|0.27|ENSG00000181143|chr19:8956959-8956959|T/-|frameshift_variant;REV__MUC16|p.L8270Wfs*63|1|0.04|ENSG00000181143|chr19:8951962-8951963|-/ACCA|frameshift_variant;REV__MUC16|p.N9430Tfs*13|1|0.14|ENSG00000181143|chr19:8948481-8948481|T/-|frameshift_variant;REV__MUC16|p.S4774Ffs*12|1|0.01|ENSG00000181143|chr19:8962451-8962452|-/AC|frameshift_variant;REV__MUC16|p.S6098Wfs*23|1|0.17|ENSG00000181143|chr19:8958477-8958478|-/GGTGACATCTCTTGGCCAACTGACCCTGGACACATCAACC|frameshift_variant;REV__MUC16|p.S6614Lfs*30|1|0.04|ENSG00000181143|chr19:8956931-8956932|-/A|frameshift_variant;REV__MUC16|p.S7713Lfs*5|1|0.45|ENSG00000181143|chr19:8953634-8953634|G/-|frameshift_variant;REV__MUC16|p.T7968Nfs*2|1|0.41|ENSG00000181143|chr19:8952867-8952868|-/T|frameshift_variant;REV__MUC16|p.T8791Qfs*38|1|0.31|ENSG00000181143|chr19:8950403-8950403|G/-|frameshift_variant	53.351449002276354	0.2844141321977336	6				NaN	NaN	0	NaN	14034	4573	18607
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18615	46.519	NaN	997.65	30	0	168.23	0.214	+			9625	ELPTPNGTT	9	47	465.23164406948956	928.4487352057791	2	465.2330017089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ELPTPNGTT_	ENSG00000107862|ENST00000369983|GBF1;GBF1|p.D1798Tfs*11|1|0.46|ENSG00000107862|chr10:102382143-102382143|C/-|frameshift_variant;GBF1|p.S1486Tfs*46|1|0.17|ENSG00000107862|chr10:102377105-102377106|-/C|frameshift_variant;GBF1|p.S825Pfs*25|1|0.34|ENSG00000107862|chr10:102367124-102367124|T/-|frameshift_variant;nc|ENSG00000107862|Q92538-1|GBF1;nc|ENSG00000107862|Q92538-2|GBF1;nc|ENSG00000107862|Q92538-3|GBF1	27.882242232435846	0.5426732730940306	6				NaN	NaN	0	NaN	14037	4576	18614
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18616	46.523	NaN	1564.4	30	0	200.42	0.038				-1	QRDPLLCRGG	10	38	405.21144750950253	NaN	0	404.8766174316406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))QRDPLLC(Carbamidomethyl (C))RGG_	ENSG00000166147|ENST00000316623|FBN1;FBN1|p.V1128F|1|0.48|ENSG00000166147|chr15:48487393-48487393|C/A|missense_variant	29.170058357718403	0.40439580130713204	6				NaN	NaN	0	NaN	14038	4576	18614
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18621	46.538	NaN	3198.8	30	0	1221.8	0.214				-1	 	0	53	520.2989915697669	1038.5834302063338	2	520.3010864257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14040	4579	18620
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18622	46.541	NaN	1408	30	0	174.96	0.036			+	13318	GKKDQWDTL	9	64	545.7799545992656	1089.545356265331	2	546.282958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GKKDQWDTL_	REV__ENSG00000171148|ENST00000301964|TADA3;REV__nc|ENSG00000171148|O75528-2|TADA3;REV__TADA3-PRPF6|1|fusion	37.81151784470057	0.4459294069877048	6				NaN	NaN	0	NaN	14041	4579	18620
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18627	46.556	NaN	2749.8	30	0	243.76	0.144			+	50453	YAELITQRE	9	61	561.7935754974421	1121.5725980616842	2	562.2971801757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YAELITQRE_	REV__ENSG00000188070|ENST00000433688|ZFTA	60.11826168202944	0.21262886028301267	6				NaN	NaN	0	NaN	14043	4582	18626
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18633	46.574	NaN	4831.7	30	0	1177.2	0.214			+	14419	GTAPLVILSH	10	37	336.5344378546052	NaN	0	336.53424072265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTAPLVILSH_	REV__ENST00000444374.1_1_9:92316696-92316852:+|nuORF	20.94693142431847	0.4201028297492154	6				NaN	NaN	0	NaN	14046	4585	18632
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18634	46.577	NaN	2052.2	30	0	162.16	0.106				-1	 	0	51	377.2263957492507	752.4382385653014	2	377.2275695800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14047	4585	18632
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18635	46.579	NaN	1059.9	30	0	59.954	0.106				-1	LTCLVPAAL	9	58	479.2762336689334	956.5379144046668	2	479.27728271484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_LTC(Carbamidomethyl (C))LVPAAL_	ENSG00000185818|ENST00000423729|NAT8L	25.450171626174864	0.5654022654467333	6				NaN	NaN	0	NaN	14048	4585	18632
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18636	46.581	NaN	1394.8	30	0	87.467	0.106			+	-1	QYVRPPAAPP	10	59	569.3070828003302	1136.5996126674604	2	569.30908203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))QYVRPPAAPP_	REV__ANGPTL2|p.P216S|1|0.25|ENSG00000136859|chr9:127108086-127108086|G/A|missense_variant;REV__ENSG00000136859|ENST00000373425|ANGPTL2	35.61828744233558	0.588957954432594	6				NaN	NaN	0	NaN	14049	4585	18632
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18637	46.583	NaN	1083.3	30	0	133.66	0.034			+	26932	LYGCHRGM	8	51	468.7132568359375	NaN	0	468.7132568359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LYGCHRGM_	REV__ENSG00000067057|ENST00000381125|PFKP;REV__ENSG00000141959|ENST00000349048|PFKL;REV__ENSG00000152556|ENST00000359794|PFKM;REV__ENST00000397961.6_1_21:45725201-45746742:+|nuORF;REV__ENST00000466134.5_1_21:45719988-45734072:+|nuORF;REV__ENST00000546964.5_1_12:48513149-48528944:+|nuORF;REV__nc|ENSG00000067057|Q01813-2|PFKP;REV__nc|ENSG00000141959|P17858-2|PFKL;REV__nc|ENSG00000152556|P08237-2|PFKM;REV__nc|ENSG00000152556|P08237-3|PFKM;REV__PFKL|p.P704Qfs*6|1|0.29|ENSG00000141959|chr21:44326177-44326177|C/-|frameshift_variant;REV__PFKM|p.A266Efs*59|1|0.04|ENSG00000152556|chr12:48134991-48134992|-/AGGGATTT|frameshift_variant;REV__PFKP|p.R265Gfs*2|3|0.32|ENSG00000067057|chr10:3107226-3107226|A/-|frameshift_variant	39.021493756699265	1.7418937515398478	6				NaN	NaN	0	NaN	14050	4585	18632
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18648	46.618	NaN	1947.6	30	0	119.33	0.214				-1	 	0	65	457.26310935181687	912.5116657704338	2	457.2640686035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14055	4591	18647
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18649	46.621	NaN	3417.9	30	0	669.35	0.106	+			17486	ICVVVMNNIL	10	55	373.20987774270935	NaN	0	373.2098388671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ICVVVMNNIL_	PIP5K1C|p.R234C|1|0.51|ENSG00000186111|chr19:3653511-3653511|G/A|missense_variant	24.20275056022122	0.4201028297492154	6				NaN	NaN	0	NaN	14056	4591	18647
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18650	46.623	NaN	1355.3	30	0	114.53	0.106			+	-1	QVCHVDCANRG	11	67	629.7749907858303	1257.5354286384604	2	629.7767333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_QVCHVDC(Carbamidomethyl (C))ANRG_	REV__ENST00000529360.1_1_11:6232738-6236214:-|nuORF	28.081489160057373	0.6952392775027776	6				NaN	NaN	0	NaN	14057	4591	18647
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18651	46.625	NaN	2084.8	30	0	193.59	0.106			+	-1	FECCIRKC	8	64	558.244577170516	1114.4746014078319	2	558.2446899414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_FECC(Carbamidomethyl (C))IRKC(Carbamidomethyl (C))_	REV__sp|F5HI87|CEP3_HCMVMCytoplasmicenvelopmentprotein3OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL99PE=3SV=1;REV__sp|P13200|CEP3_HCMVACytoplasmicenvelopmentprotein3OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL99PE=1SV=3	31.954861631926434	0.7126016770032289	6				NaN	NaN	0	NaN	14058	4591	18647
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18652	46.627	NaN	1693.4	30	0	250.15	0.036			+	617	ADTVRVVSEP	10	68	536.7841186523438	NaN	0	536.7841186523438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_ADTVRVVSEP_	REV__DNHD1|p.S3597Rfs*6|1|0.1|ENSG00000179532|chr11:6565718-6565719|-/AG|frameshift_variant;REV__DNHD1|p.T4259Pfs*33|2|0.33|ENSG00000179532|chr11:6568772-6568772|C/-|frameshift_variant;REV__ENSG00000179532|ENST00000254579|DNHD1	44.377184641726394	0.34115073642966565	6				NaN	NaN	0	NaN	14059	4591	18647
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18657	46.641	NaN	2775.8	30	0	593.77	0.214			+	-1	YRWVCDYL	8	70	587.7704958059779	1173.5264386787558	2	587.7720947265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_YRWVC(Carbamidomethyl (C))DYL_	REV__ENSG00000162413|ENST00000377658|KLHL21;REV__nc|ENSG00000162413|Q9UJP4-2|KLHL21	50.0245360154114	0.5941082100236891	6				NaN	NaN	0	NaN	14061	4594	18656
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18658	46.645	NaN	3808.3	30	0	894.16	0.106			+	42576	TASSAPVI	8	50	373.20987774270935	NaN	0	373.20989990234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TASSAPVI_	REV__ENSG00000166432|ENST00000651725|ZMAT1;REV__ENST00000458570.5_1_X:101149758-101187002:-|nuORF;REV__ENST00000488347.5_1_X:101149758-101186981:-|nuORF;REV__ZMAT1|p.I482Tfs*17|1|0.04|ENSG00000166432|chrX:101883979-101883982|CTAA/-|frameshift_variant;REV__ZMAT1|p.Y484Tfs*16|1|0.04|ENSG00000166432|chrX:101883977-101883977|A/-|frameshift_variant	26.79610172149135	1.7418937515398478	6				NaN	NaN	0	NaN	14062	4594	18656
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18659	46.647	NaN	1414.7	30	0	107.15	0.106				-1	DLRPREVMLS	10	63	616.3271002523122	1230.6396475714243	2	616.328857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_DLRPREVM(Oxidation (M))LS_	ENST00000455575.1_1_7:86848849-86849557:-|nuORF	30.317721548370564	0.6322445173429027	6				NaN	NaN	0	NaN	14063	4594	18656
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18660	46.649	NaN	1135.3	30	0	362.49	0.033				-1	IARGMAIL	8	43	443.7641648662583	NaN	0	443.76458740234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))IARGMAIL_	ENSG00000113161|ENST00000287936|HMGCR;HMGCR|p.T167M|1|0.15|ENSG00000113161|chr5:75347253-75347253|C/T|missense_variant;nc|ENSG00000113161|P04035-2|HMGCR;nc|ENSG00000113161|P04035-3|HMGCR	28.2542754592877	1.7418937515398478	6				NaN	NaN	0	NaN	14064	4594	18656
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18665	46.663	NaN	4942.9	30	0	456.99	0.214			+	19565	KCRIPLKM	8	62	502.7908788794932	1003.5672048257865	2	502.7924499511719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_KCRIPLKM(Oxidation (M))_	REV__tr|U7T2J6|U7T2J6_FUSNULargeribosomalsubunitproteinuL16OS=FusobacteriumnucleatumCTI-5OX=1316586GN=rplPPE=3SV=1	52.29916861842294	0.578018602984656	6				NaN	NaN	0	NaN	14066	4597	18664
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18666	46.667	NaN	1663.6	30	0	95.641	0.106	+			5360	ATVYLIYLK	9	55	542.3266821392001	NaN	0	542.3268432617188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATVYLIYLK_	ENSG00000136240|ENST00000258739|KDELR2;nc|ENSG00000136240|P33947-2|KDELR2	79.45101966838831	0.07326487554222888	6				NaN	NaN	0	NaN	14067	4597	18664
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18667	46.669	NaN	1322	30	0	142.59	0.106			+	21516	KNPSVTIKF	9	57	517.3056034167299	NaN	0	517.3062133789062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_KNPSVTIKF_	REV__ENSG00000055208|ENST00000637181|TAB2;REV__nc|ENSG00000055208|Q9NYJ8-2|TAB2	40.05817265558897	0.275207446262312	6				NaN	NaN	0	NaN	14068	4597	18664
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18668	46.671	NaN	1909.3	30	0	249.61	0.035			+	38693	SSKIKSTKL	9	56	496.31141527180563	990.6082776104113	2	496.8152770996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_SSKIKSTKL_	REV__ENSG00000120800|ENST00000261637|UTP20	46.45678178249821	0.34452392205506005	6				NaN	NaN	0	NaN	14069	4597	18664
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18676	46.69	NaN	11122	30	0	620.54	0.214				-1	 	0	91	360.2054697731293	718.3963866130587	2	360.2066345214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14074	4600	18675
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18677	46.694	NaN	4109	30	0	789.65	0.106	+			29191	NVLFENNIL	9	66	538.2930871857834	1074.5716214383667	2	538.29541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NVLFENNIL_	tr|U7T2K1|U7T2K1_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00479PE=4SV=1	58.78195531508484	0.22376836668196862	6				NaN	NaN	0	NaN	14075	4600	18675
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18678	46.696	NaN	2438.7	30	0	211.99	0.106	+			49860	VYSRYFTTY	9	69	600.290475568244	NaN	0	600.2903442382812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	49.536043120802724	0.20989033510253738	6				NaN	NaN	0	NaN	14076	4600	18675
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18679	46.698	NaN	1124.4	30	0	95.522	0.037	+			25281	LNSELENGKQ	10	56	566.2897500597632	NaN	0	566.2894897460938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LNSELENGKQ_	ENSG00000170160|ENST00000399273|CCDC144A;ENST00000328495.9_1_17:16623938-16667555:+|nuORF;ENST00000470068.2_1_17:16635099-16667555:+|nuORF;nc|ENSG00000266302|A2RUR9-2|CCDC144A;nc|ENSG00000266302|A2RUR9-3|CCDC144A;nc|ENSG00000266302|A2RUR9|CCDC144A	35.15202426646627	0.38475398474706135	6				NaN	NaN	0	NaN	14077	4600	18675
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18685	46.713	NaN	1695.4	30	0	267.6	0.214	+			41527	SVPVSLQTL	9	58	472.2750791077302	942.5356052822605	2	472.27581787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SVPVSLQTL_	ENSG00000116213|ENST00000270708|WRAP73	60.11826168202944	0.21262886028301267	6				NaN	NaN	0	NaN	14080	4603	18684
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18686	46.716	NaN	2229.4	30	0	102.38	0.106			+	-1	YVRMPVCR	8	76	569.7808425786216	1137.547132224043	2	569.78125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term),Carbamidomethyl (C),Oxidation (M)	_(Acetyl (Protein N-term))YVRM(Oxidation (M))PVC(Carbamidomethyl (C))R_	REV__ENST00000377223.5_1_1:9989439-9989595:-|nuORF	31.954861631926434	0.7126016770032289	6				NaN	NaN	0	NaN	14081	4603	18684
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18687	46.718	NaN	2132.7	30	0	193.61	0.036			+	32703	RAHWNRYL	8	70	558.2988964377026	NaN	0	558.2990112304688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RAHWNRYL_	REV__CLSTN1|p.R776L|1|0.16|ENSG00000171603|chr1:9733501-9733501|C/A|missense_variant	33.51558372728122	1.7418937515398478	6				NaN	NaN	0	NaN	14082	4603	18684
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18696	46.738	NaN	3027.1	30	0	175.96	0.214				-1	 	0	63	382.2185288531111	762.4225047730222	2	382.2196960449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14088	4606	18695
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18697	46.742	NaN	6696.5	30	0	5146.2	0.106				-1	 	0	54	368.7187242403514	735.4228955475028	2	368.72003173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14089	4606	18695
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18698	46.744	NaN	1449.7	30	0	184.28	0.106	+			11416	FLRGSNAES	9	53	490.7442502511883	979.4739475691766	2	490.7452087402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FLRGSNAES_	ENSG00000114248|ENST00000316428|LRRC31;LRRC31|p.K23T|1|0.23|ENSG00000114248|chr3:169869740-169869740|T/G|missense_variant;nc|ENSG00000114248|Q6UY01-2|LRRC31;nc|ENSG00000114248|Q6UY01-3|LRRC31;nc|ENSG00000114248|Q6UY01-4|LRRC31	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	14090	4606	18695
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18699	46.745	NaN	980.04	30	0	85.535	0.035			+	30011	PPLDMYSY	8	47	493.22239228189005	984.4302316305801	2	493.2234191894531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_PPLDMYSY_	REV__tr|U7SQP7|U7SQP7_FUSNULipopolysaccharidecholinephosphotransferaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01651PE=4SV=1	35.200714571348534	0.6875396545722289	6				NaN	NaN	0	NaN	14091	4606	18695
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18706	46.776	NaN	2098.4	30	0	448.67	0.144				-1	 	0	56	506.29583118763077	1010.5771094420616	2	506.7989807128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14092	4612	18705
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18713	46.796	NaN	2085.8	30	0	202.12	0.214	+			36285	SEQKFLIGL	9	58	517.79627787431	1033.57800281542	2	517.7985229492188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SEQKFLIGL_	ENSG00000137200|ENST00000373451|CMTR1	61.691277971877994	0.19951612995419254	6				NaN	NaN	0	NaN	14096	4615	18712
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18714	46.799	NaN	1296.8	30	0	207.72	0.106	+			16819	HPDLIMGF	8	43	465.2322859758646	NaN	0	465.2312927246094	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HPDLIMGF_	ENSG00000169375|ENST00000394947|SIN3A;SIN3A|p.G659Afs*26|1|0.14|ENSG00000169375|chr15:75396375-75396375|C/-|frameshift_variant	20.481830146152948	1.741893751539848	6				NaN	NaN	0	NaN	14097	4615	18712
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18715	46.801	NaN	1743	30	0	189.07	0.106			+	-1	MDESPLQAVV	10	65	552.7687872288499	NaN	0	552.7695922851562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_M(Oxidation (M))DESPLQAVV_	REV__ENSG00000172818|ENST00000335987|OVOL1	42.396135135203025	0.3536752194735987	6				NaN	NaN	0	NaN	14098	4615	18712
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18716	46.803	NaN	1639.2	30	0	169.4	0.037	+			24379	LFSLCHCLW	9	66	561.2666625976562	NaN	0	561.2666625976562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LFSLCHCLW_	ENST00000293880.9_1_11:57100225-57103093:-|nuORF	25.450171626174864	0.34907449758287085	6				NaN	NaN	0	NaN	14099	4615	18712
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18722	46.819	NaN	5098.6	30	0	334.9	0.214				-1	 	0	77	435.2500124214238	868.4854719096476	2	435.25115966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14102	4618	18721
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18723	46.823	NaN	1346.5	30	0	92.152	0.035	+			33308	RGRLAIRY	8	58	502.8084175374343	1003.6022821416686	2	502.81036376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RGRLAIRY_	ENST00000567123.1_3_15:75075012-75091204:+|nuORF	42.47446043378293	0.6409579893742323	6				NaN	NaN	0	NaN	14103	4618	18721
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18727	46.837	NaN	1731.7	30	0	198.28	0.145			+	-1	FCRLVAGAGW	10	63	568.7876368864636	1135.560720839727	2	569.2916870117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_FC(Carbamidomethyl (C))RLVAGAGW_	REV__ENST00000582104.5_2_17:46185168-46189939:+|nuORF	31.954861631926434	0.6188749698950511	6				NaN	NaN	0	NaN	14104	4621	18726
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18731	46.853	NaN	1453.8	30	0	97.025	0.214				-1	 	0	59	543.2994017757388	542.2921253091388	1	543.3015747070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14105	4624	18730
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18732	46.857	NaN	1356.4	30	0	162.55	0.106			+	33285	RGLLPLYTE	9	58	531.3019256756473	1060.5892984180946	2	531.80810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RGLLPLYTE_	REV__ENST00000521792.2_1_8:43125532-43126024:-|nuORF	31.954861631926434	0.5046124803899898	6				NaN	NaN	0	NaN	14106	4624	18730
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18733	46.859	NaN	2280.8	30	0	221.44	0.036	+			51095	YLSINLHQE	9	61	558.7882426139025	1115.561932294605	2	558.789306640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YLSINLHQE_	ENSG00000131864|ENST00000254181|USP29	66.42927471994793	0.16001998865088202	6				NaN	NaN	0	NaN	14107	4624	18730
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18737	46.873	NaN	2684.5	30	0	346.41	0.214				-1	 	0	53	488.7935443829866	975.5725358327733	2	488.7947692871094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14108	4627	18736
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18738	46.876	NaN	1206.2	30	0	123.35	0.036	+			29021	NSRRREPI	8	34	343.19766570240824	NaN	0	343.19781494140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NSRRREPI_	CYB5R2|p.T145Hfs*8|1|0.13|ENSG00000166394|chr11:7668517-7668517|T/-|frameshift_variant;ENSG00000166394|ENST00000299498|CYB5R2;ENST00000525307.1_1_11:7693939-7694113:-|nuORF;ENST00000526084.1_1_11:7693541-7694179:-|nuORF;ENST00000534443.5_1_11:7688946-7694113:-|nuORF;nc|ENSG00000166394|Q6BCY4-2|CYB5R2	17.364965105453717	1.7418937515398478	6				NaN	NaN	0	NaN	14109	4627	18736
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18743	46.891	NaN	4235.3	30	0	350.55	0.214				-1	 	0	59	338.1924909359825	674.370428938765	2	338.19329833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14111	4630	18742
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18744	46.895	NaN	412.57	30	0	38.715	0.029				-1	 	0	25	285.16123399315734	568.3079150531147	2	285.16192626953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14112	4630	18742
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18753	46.916	NaN	5305.9	30	0	312.13	0.214				-1	 	0	70	372.1844813671747	742.3544098011495	2	372.1855773925781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14118	4633	18752
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18754	46.92	NaN	3786.6	30	0	234.08	0.106				-1	 	0	64	382.1876416901246	762.3607304470493	2	382.18865966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14119	4633	18752
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18755	46.922	NaN	780.98	30	0	127.08	0.106				-1	 	0	40	263.14820442680997	524.28185592042	2	263.14892578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14120	4633	18752
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18756	46.924	NaN	354.03	30	0	66.53	0.106				-1	 	0	21	219.1221028804043	436.2296528276086	2	219.12277221679688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14121	4633	18752
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18757	46.925	NaN	494.74	30	0	39.12	0.106				-1	 	0	31	241.1351051923441	480.2556574514882	2	241.1357421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14122	4633	18752
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18758	46.927	NaN	813.75	30	0	74.16	0.106				-1	 	0	38	307.17424654411985	612.3339401550397	2	307.1751403808594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14123	4633	18752
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18759	46.929	NaN	2941.5	30	0	304.67	0.031	+			2488	APREGGGGG	9	57	379.18263078954834	756.3507086458967	2	379.1841735839844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_APREGGGGG_	ENST00000273067.4_1_2:217236318-217236390:-|nuORF	24.20275056022122	0.577060078256802	6				NaN	NaN	0	NaN	14124	4633	18752
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18765	46.943	NaN	6096.6	30	0	3972.4	0.215				-1	 	0	53	377.2307428787136	752.4469328242272	2	377.2327575683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14127	4636	18764
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18766	46.947	NaN	3926	30	0	589.69	0.106			+	-1	IFRMMEKF	8	71	567.2778571654267	1132.5411613976532	2	567.279052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Oxidation (M)	_IFRM(Oxidation (M))M(Oxidation (M))EKF_	REV__ENSG00000144228|ENST00000280098|SPOPL;REV__ENST00000420679.1_1_2:139308594-139326647:+|nuORF	65.80317337860623	0.44433089765398776	6				NaN	NaN	0	NaN	14128	4636	18764
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18767	46.949	NaN	1905.5	30	0	167.27	0.106			+	-1	GGSSSGAVM	9	54	384.6638039282106	767.3130549232212	2	384.66522216796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_GGSSSGAVM(Oxidation (M))_	REV__ENSG00000020633|ENST00000308873|RUNX3;REV__nc|ENSG00000020633|Q13761-2|RUNX3;REV__RUNX3|p.R355C|1|0.13|ENSG00000020633|chr1:24902307-24902307|G/A|missense_variant	18.324413293986947	0.6112419832031293	6				NaN	NaN	0	NaN	14129	4636	18764
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18768	46.951	NaN	2439.1	30	0	338.86	0.106	+			19146	IYNQVNVVL	9	57	531.3019256756473	1060.5892984180946	2	531.3040161132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IYNQVNVVL_	ENSG00000153310|ENST00000694912|CYRIB;ENST00000523288.5_1_8:130864395-130891707:-|nuORF	63.30626980617807	0.18605348971131092	6				NaN	NaN	0	NaN	14130	4636	18764
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18769	46.952	NaN	1693.9	30	0	167.7	0.106	+			43026	TEKTVFTVF	9	62	536.2875635941373	1070.5605742550745	2	536.2905883789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_TEKTVFTVF_	ENSG00000165474|ENST00000382848|GJB2;ENSG00000169562|ENST00000361726|GJB1	58.22992032128504	0.22837015374068087	6				NaN	NaN	0	NaN	14131	4636	18764
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18770	46.954	NaN	3947.4	30	0	356.04	0.03	+			13124	GGKAGKGG	8	59	316.17949497832205	630.3444370234441	2	316.1803283691406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_GGKAGKGG_	CHMP4B|p.Q23Rfs*14|1|0.33|ENSG00000101421|chr20:33811530-33811530|C/-|frameshift_variant;ENSG00000101421|ENST00000217402|CHMP4B;REV__ENSG00000070729|ENST00000251102|CNGB1;REV__nc|ENSG00000070729|Q14028-2|CNGB1;REV__nc|ENSG00000070729|Q14028-4|CNGB1	8.822329726475273	0.7821568878176242	6				NaN	NaN	0	NaN	14132	4636	18764
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18775	46.968	NaN	1852.7	30	0	112.09	0.214				-1	 	0	58	479.27631329734083	956.5380736614817	2	479.2774658203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14134	4639	18774
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18776	46.972	NaN	1578.3	30	0	100.64	0.032			+	-1	GGMAACHL	8	45	388.1635890196182	774.3126251060364	2	388.1661682128906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_GGM(Oxidation (M))AACHL_	REV__ANKEF1|p.Y257C|1|0.38|ENSG00000132623|chr20:10045647-10045647|A/G|missense_variant	16.704963439144045	0.7946246187734944	6				NaN	NaN	0	NaN	14135	4639	18774
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18782	46.988	NaN	747.6	30	0	62.232	0.143			+	47317	VNYVKKIY	8	47	513.8012147420304	1025.5878765508608	2	513.8021240234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VNYVKKIY_	REV__tr|U7SWE8|U7SWE8_FUSNUHeptosyltransferaseIIOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01006PE=4SV=1	28.2542754592877	0.7411748056684583	6				NaN	NaN	0	NaN	14138	4642	18781
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18787	47.004	NaN	1033.5	30	0	93.383	0.14			+	39823	STLIADFLLIS	11	45	398.23264632857484	NaN	0	398.2326965332031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STLIADFLLIS_	REV__ENSG00000134490|ENST00000383233|TMEM241;REV__ENST00000581444.5_1_18:20889645-20956810:-|nuORF	25.125986553469783	0.45344013546260314	6				NaN	NaN	0	NaN	14140	4645	18786
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18796	47.028	NaN	137940	30	0	17097	0.153				-1	 	0	102	360.2054697731293	718.3963866130587	2	360.2064514160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14146	4648	18795
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18797	47.031	NaN	2211.8	30	0	182.89	0.106	+			33432	RIKCMKIL	8	55	510.80646655279304	1019.5983801723861	2	510.8084716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_RIKCM(Oxidation (M))KIL_	ZSWIM2|p.H173R|1|0.38|ENSG00000163012|chr2:186837531-186837531|T/C|missense_variant	40.5726180659479	0.6527593143185008	6				NaN	NaN	0	NaN	14147	4648	18795
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18798	47.033	NaN	1772.4	30	0	263.57	0.036	+			30268	PTEAGTICRF	10	55	547.7672153561813	1093.5198777791625	2	547.7699584960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PTEAGTICRF_	ENSG00000101353|ENST00000343811|MROH8;nc|ENSG00000101353|Q9H579-2|MROH8	32.81241826257853	0.6118718159329168	6				NaN	NaN	0	NaN	14148	4648	18795
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18803	47.047	NaN	4208.7	30	0	961.84	0.213	+			8603	ECISQSPTCYK	11	70	629.7749081955671	1257.5352634579342	2	629.77783203125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ECISQSPTCYK_	ENSG00000151779|ENST00000281513|NBAS;NBAS|p.L1365Ifs*4|1|0.13|ENSG00000151779|chr2:15352075-15352078|AAAG/-|frameshift_variant;NBAS|p.Y1476Mfs*33|1|0.28|ENSG00000151779|chr2:15328234-15328234|A/-|frameshift_variant;nc|ENSG00000151779|A2RRP1-2|NBAS	41.080066990542036	0.5431644350485484	6				NaN	NaN	0	NaN	14150	4651	18802
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18804	47.051	NaN	1694.7	30	0	187.63	0.106	+			49861	VYSRYFTTY	9	60	600.290475568244	NaN	0	600.2904052734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	75.04331003522576	0.0883683072398826	6				NaN	NaN	0	NaN	14151	4651	18802
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18805	47.053	NaN	1812.5	30	0	343.23	0.034				-1	 	0	46	485.23610629485125	968.4576596565025	2	485.2367858886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14152	4651	18802
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18809	47.067	NaN	5969	30	0	691.29	0.214				-1	 	0	54	340.20810321738753	678.4016535015751	2	340.2091369628906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14153	4654	18808
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18810	47.07	NaN	1871.9	30	0	95.036	0.106				-1	 	0	69	457.2630568823195	912.511560831439	2	457.2643737792969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14154	4654	18808
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18811	47.072	NaN	5911.5	30	0	4542.1	0.106				-1	 	0	42	348.7213903140121	695.4282276948243	2	348.7226867675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14155	4654	18808
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18812	47.074	NaN	3370.5	30	0	640.92	0.037	+			4318	ATGKRFYFK	9	48	373.20987774270935	NaN	0	373.2097473144531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_ATGKRFYFK_	CLCA1|p.N76_V77insLLF|1|0.06|ENSG00000016490|chr1:86473481-86473482|-/CTTGTTATT|inframe_insertion;CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	29.14955571784316	0.3303970763161698	6				NaN	NaN	0	NaN	14156	4654	18808
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18817	47.089	NaN	24675	30	0	21070	0.214				-1	 	0	67	368.7187242403514	735.4228955475028	2	368.7197570800781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14158	4657	18816
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18818	47.092	NaN	1520.7	30	0	258.71	0.036			+	11719	FSCCLTANTGV	11	54	558.2490133245187	NaN	0	558.2503051757812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FSCCLTANTGV_	REV__CD276|p.D45N|1|0.33|ENSG00000103855|chr15:73702308-73702308|G/A|missense_variant	24.519189625965996	0.45614437233802635	6				NaN	NaN	0	NaN	14159	4657	18816
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18822	47.107	NaN	3545.1	30	0	227.36	0.214				-1	 	0	72	457.2630568823195	912.511560831439	2	457.263916015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14160	4660	18821
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18823	47.11	NaN	1414	30	0	88.323	0.106				-1	 	0	42	352.18722351774	702.35989410228	2	352.1882629394531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14161	4660	18821
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18824	47.112	NaN	1348.9	30	0	237.02	0.038	+			37369	SLFNAMNRFI	10	44	404.8768310546875	NaN	0	404.8768310546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SLFNAMNRFI_	ENSG00000165175|ENST00000614558|MID1IP1;MID1IP1|p.G23C|1|0.06|ENSG00000165175|chrX:38805013-38805013|G/T|missense_variant	24.20275056022122	0.4201028297492154	6				NaN	NaN	0	NaN	14162	4660	18821
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18830	47.127	NaN	765.53	30	0	249.2	0.214				-1	 	0	32	243.15072861169068	484.2869042901814	2	243.1514129638672	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14165	4663	18829
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18831	47.131	NaN	1370.9	30	0	443.1	0.106	+			29844	PLARIKKIM	9	35	357.2359530600124	NaN	0	357.2359619140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PLARIKKIM_	ENSG00000066136|ENST00000447388|NFYC;ENST00000437925.1_1_9:89699796-89699949:-|nuORF;ENST00000467203.5_1_1:41157373-41224011:+|nuORF;nc|ENSG00000066136|Q13952-3|NFYC;nc|ENSG00000066136|Q13952-4|NFYC;nc|ENSG00000066136|Q13952-5|NFYC;nc|ENSG00000066136|Q13952-6|NFYC;nc|ENSG00000066136|Q13952-7|NFYC;nc|ENSG00000066136|Q13952|NFYC	10.265252068803164	0.4022383999429647	6				NaN	NaN	0	NaN	14166	4663	18829
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18832	47.133	NaN	1508.1	30	0	139.96	0.106	+			13261	GISDVLVKI	9	50	472.2943115234375	NaN	0	472.2943115234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GISDVLVKI_	ENST00000468309.1_1_10:21957921-21959695:+|nuORF	27.882242232435846	0.3367954786602879	6				NaN	NaN	0	NaN	14167	4663	18829
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18833	47.134	NaN	1638.7	30	0	195.54	0.036			+	10917	FDITLYIST	9	63	536.7816162109375	NaN	0	536.7816162109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FDITLYIST_	REV__tr|U7SPP7|U7SPP7_FUSNUMethylaspartatemutaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01855PE=4SV=1	44.116797842482775	0.2472372736944149	6				NaN	NaN	0	NaN	14168	4663	18829
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18844	47.158	NaN	3544.3	30	0	227.08	0.214				-1	 	0	73	435.2500124214238	868.4854719096476	2	435.2509460449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14176	4666	18843
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18845	47.162	NaN	4020.3	30	0	747.93	0.106			+	34704	RVTSVLYGL	9	44	336.5344378546052	NaN	0	336.53424072265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RVTSVLYGL_	REV__ENSG00000118946|ENST00000377918|PCDH17;REV__nc|ENSG00000118946|O14917-2|PCDH17;REV__PCDH17|p.E776Dfs*7|1|0.07|ENSG00000118946|chr13:57634873-57634874|-/TGATG|frameshift_variant;REV__PCDH17|p.N765Mfs*16|1|0.55|ENSG00000118946|chr13:57634836-57634836|A/-|frameshift_variant	24.20275056022122	0.35506675290109213	6				NaN	NaN	0	NaN	14177	4666	18843
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18846	47.164	NaN	79.343	30	0	20.237	0.106				-1	 	0	7	221.13831682166878	NaN	0	221.1383056640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14178	4666	18843
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18847	47.165	NaN	466.22	30	0	118.29	0.106				-1	 	0	22	199.12527366473495	NaN	0	199.125244140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14179	4666	18843
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18848	47.167	NaN	2066.4	30	0	100.18	0.106				-1	 	0	59	383.22630292404597	764.438052914892	2	383.2274169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14180	4666	18843
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18849	47.169	NaN	6785.2	30	0	920.3	0.106	+			25099	LLPGLTEIP	9	54	318.19609789801956	NaN	0	318.196044921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LLPGLTEIP_	ENST00000588933.5_1_19:9529933-9544772:-|nuORF	13.775330524044264	0.3903584932235582	6				NaN	NaN	0	NaN	14181	4666	18843
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18850	47.171	NaN	1792.2	30	0	138.37	0.035	+			11035	FELIVQKL	8	58	495.3038002426084	988.5930475520169	2	495.3052673339844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FELIVQKL_	ENSG00000108424|ENST00000290158|KPNB1;nc|ENSG00000108424|Q14974-2|KPNB1	82.7504851949679	0.3006553482314138	6				NaN	NaN	0	NaN	14182	4666	18843
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18858	47.191	NaN	2144.7	30	0	174.8	0.214			+	27732	MQLPRPRGP	9	55	351.2001488290751	NaN	0	351.2001037597656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MQLPRPRGP_	REV__ENST00000455547.5_1_22:36922907-36925191:-|nuORF	20.94693142431847	0.3660861156085067	6				NaN	NaN	0	NaN	14187	4669	18857
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18859	47.194	NaN	2857.1	30	0	531.94	0.106			+	770	AEEPLARGLA	10	62	513.7830737458788	1025.5515945585576	2	513.78466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AEEPLARGLA_	REV__ENST00000413800.5_1_7:99764329-99764836:-|nuORF	42.396135135203025	0.5270658956260207	6				NaN	NaN	0	NaN	14188	4669	18857
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18860	47.196	NaN	2417.8	30	0	164.89	0.106	+			17525	IDLLLISH	8	55	462.28016601762454	922.5457791020491	2	462.2817077636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IDLLLISH_	CPSF3|p.L74S|1|0.27|ENSG00000119203|chr2:9430760-9430760|T/C|missense_variant;ENSG00000119203|ENST00000238112|CPSF3	73.97473282117947	0.3737790450121076	6				NaN	NaN	0	NaN	14189	4669	18857
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18861	47.198	NaN	3574.8	30	0	703.85	0.106			+	1595	AGLCFINLLGP	11	49	373.20987774270935	NaN	0	373.2096252441406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_AGLCFINLLGP_	REV__ENST00000447413.1_1_2:178188087-178196943:-|nuORF	20.83715455343099	0.456735970842152	6				NaN	NaN	0	NaN	14190	4669	18857
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18862	47.2	NaN	3231.1	30	0	621.03	0.106				-1	 	0	63	483.8013259731184	965.5880990130369	2	483.8026123046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14191	4669	18857
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18863	47.201	NaN	1086.1	30	0	107.34	0.106				-1	 	0	61	543.2994017757388	542.2921253091388	1	543.3014526367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14192	4669	18857
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18864	47.203	NaN	2419.1	30	0	266.07	0.036	+			10888	FCLLLRAIN	9	64	531.8116412610342	NaN	0	531.8123779296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_FCLLLRAIN_	nc|ENSG00000185842|Q0VDD8|DNAH14	82.30502934623384	0.06348534290027165	6				NaN	NaN	0	NaN	14193	4669	18857
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18877	47.239	NaN	1015.4	30	0	164.86	0.142	+			40262	STSPPPEKS	9	34	465.2326491984967	NaN	0	465.23199462890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STSPPPEKS_	ENSG00000069275|ENST00000367142|NUCKS1;nc|ENSG00000069275|Q9H1E3-2|NUCKS1	16.473147378115264	0.38122769658151995	6				NaN	NaN	0	NaN	14200	4675	18876
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18883	47.257	NaN	3440	30	0	470.14	0.214	+			34319	RTMTVFRKA	9	67	555.318397391058	1108.622241848916	2	555.321044921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RTMTVFRKA_	ENSG00000108651|ENST00000261708|UTP6	26.69291269510374	0.5537881896960711	6				NaN	NaN	0	NaN	14203	4678	18882
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18884	47.261	NaN	962.76	30	0	92.857	0.034			+	26959	LYIQAVLL	8	54	466.79474466662094	NaN	0	466.7938232421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LYIQAVLL_	REV__ENST00000591565.1_1_19:14515197-14515620:+|nuORF	25.450171626174864	1.7418937515398478	6				NaN	NaN	0	NaN	14204	4678	18882
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18894	47.293	NaN	19290	30	0	1856.5	0.214				-1	 	0	81	338.19252249337535	674.3704920535507	2	338.1934509277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14208	4684	18893
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18895	47.297	NaN	1274.9	30	0	144.67	0.106			+	50163	WLAGYSSI	8	53	448.72771187886	895.4408708245201	2	448.72900390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WLAGYSSI_	REV__ENSG00000104313|ENST00000340726|EYA1;REV__ENST00000496494.5_1_8:72111577-72234167:-|nuORF;REV__nc|ENSG00000104313|Q99502-2|EYA1	35.200714571348534	0.6875396545722289	6				NaN	NaN	0	NaN	14209	4684	18893
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18896	47.299	NaN	2021.6	30	0	296.09	0.036				-1	HCGWCVLHS	9	60	549.7341099483759	1097.4536669635518	2	549.7353515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_HCGWC(Carbamidomethyl (C))VLHS_	ENSG00000114554|ENST00000393409|PLXNA1;PLXNA1|p.Q1019Rfs*22|3|0.36|ENSG00000114554|chr3:127016548-127016548|C/-|frameshift_variant	25.450171626174864	0.5654022654467333	6				NaN	NaN	0	NaN	14210	4684	18893
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18902	47.314	NaN	2872.3	30	0	142.48	0.142				-1	 	0	66	479.27631329734083	956.5380736614817	2	479.2773132324219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14213	4687	18901
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18912	47.347	NaN	2240.7	30	0	161.73	0.143	+			37494	SLKTVQGKK	9	60	494.8115685704494	987.6085842076989	2	494.8138122558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLKTVQGKK_	ENSG00000174827|ENST00000417171|PDZK1;ENST00000401008.6_1_1:147468098-147482410:-|nuORF;ENST00000425209.1_1_1:147466535-147481815:-|nuORF;nc|ENSG00000215859|A8MUH7-2|PDZK1P1;nc|ENSG00000215859|A8MUH7|PDZK1P1	26.69291269510374	0.5537881896960711	6				NaN	NaN	0	NaN	14217	4693	18911
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18918	47.364	NaN	3336.4	30	0	258.23	0.139				-1	 	0	67	360.20546886882687	718.3963848044538	2	360.20648193359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14220	4696	18917
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18928	47.4	NaN	1347	30	0	105.37	0.145	+			49862	VYSRYFTTY	9	64	600.2903004612194	NaN	0	600.2900390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	39.252832667884924	0.27938773122138094	6				NaN	NaN	0	NaN	14224	4702	18927
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18932	47.416	NaN	4515.5	30	0	429.26	0.214				-1	 	0	64	340.20810321738753	678.4016535015751	2	340.2090759277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14225	4705	18931
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18933	47.42	NaN	2933.3	30	0	2023.4	0.106				-1	 	0	36	348.7213903140121	695.4282276948243	2	348.7223205566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14226	4705	18931
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18934	47.422	NaN	1610.4	30	0	79.509	0.032				-1	 	0	49	399.2393918498312	796.4642307664624	2	399.2403259277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14227	4705	18931
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18938	47.436	NaN	3298.4	30	0	1453	0.214				-1	 	0	50	368.7187242403514	735.4228955475028	2	368.72003173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14228	4708	18937
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18939	47.439	NaN	1577.3	30	0	210.07	0.106			+	27420	MLAEAREKS	9	54	517.7691230611814	1033.5236931891627	2	517.7711181640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MLAEAREKS_	REV__ENSG00000119285|ENST00000366582|HEATR1;REV__HEATR1|p.M2021I|1|0.07|ENSG00000119285|chr1:236554613-236554613|C/T|missense_variant	39.252832667884924	0.4290233611298554	6				NaN	NaN	0	NaN	14229	4708	18937
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18940	47.441	NaN	2476.7	30	0	194.39	0.036	+			11822	FSVINSNVII	10	68	553.3148812317446	1104.6152095302891	2	553.31640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FSVINSNVII_	ENSG00000103449|ENST00000251020|SALL1;ENST00000438101.1_1_X:49432665-49432995:-|nuORF;nc|ENSG00000103449|Q9NSC2-2|SALL1;SALL1|p.A362Pfs*19|1|0.3|ENSG00000103449|chr16:51141138-51141138|C/-|frameshift_variant;SALL1|p.P561Qfs*45|1|0.26|ENSG00000103449|chr16:51140540-51140540|G/-|frameshift_variant;SALL1|p.T412Nfs*26|1|0.26|ENSG00000103449|chr16:51140987-51140988|-/T|frameshift_variant;SALL1|p.V965Sfs*11|1|0.18|ENSG00000103449|chr16:51139330-51139331|-/G|frameshift_variant	60.1669710687717	0.3643216362415131	6				NaN	NaN	0	NaN	14230	4708	18937
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18945	47.456	NaN	5754.6	30	0	341.4	0.142				-1	 	0	84	457.2630568823195	912.511560831439	2	457.2640686035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14232	4711	18944
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18950	47.472	NaN	1435.9	30	0	190.32	0.143	+			1474	AFLKVSSVF	9	55	499.28992976513183	NaN	0	499.2896728515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AFLKVSSVF_	ENSG00000100401|ENST00000356244|RANGAP1	40.77816245573522	0.2702456086868081	6				NaN	NaN	0	NaN	14234	4714	18949
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18957	47.504	NaN	1779.8	30	0	74.826	0.141				-1	 	0	55	435.2500124214238	868.4854719096476	2	435.2509460449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14235	4720	18956
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18962	47.521	NaN	2677.3	30	0	195.59	0.214			+	38187	SQDTEENSLN	10	66	568.7397511957529	1135.4649494583057	2	569.2430419921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SQDTEENSLN_	REV__ENSG00000083093|ENST00000261584|PALB2;REV__PALB2|p.E1010*|1|0.26|ENSG00000083093|chr16:23621448-23621449|-/G|frameshift_variant;REV__PALB2|p.L1006Ffs*5|1|0.3|ENSG00000083093|chr16:23621457-23621458|-/A|frameshift_variant;REV__PALB2|p.L451V|1|0.11|ENSG00000083093|chr16:23635195-23635195|A/C|missense_variant	61.691277971877994	0.35045824941635534	6				NaN	NaN	0	NaN	14237	4723	18961
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18963	47.524	NaN	2440.6	30	0	232.24	0.106			+	24354	LFLVLSQDQ	9	61	531.7931594922346	1061.5717660512692	2	531.7965698242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LFLVLSQDQ_	REV__ENSG00000176200|ENST00000313253|OR4D11	56.72105179125745	0.24094814563026265	6				NaN	NaN	0	NaN	14238	4723	18961
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18964	47.526	NaN	1833.6	30	0	172.75	0.035				-1	 	0	60	508.80907277468185	1015.6035926161637	2	508.81005859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14239	4723	18961
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18971	47.544	NaN	4348	30	0	1072.1	0.214	+			30365	PVGLAHPQWL	10	58	373.20987774270935	NaN	0	373.209716796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PVGLAHPQWL_	ENSG00000185668|ENST00000373012|POU3F1	24.20275056022122	0.4201028297492154	6				NaN	NaN	0	NaN	14243	4726	18970
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18972	47.548	NaN	1520.5	30	0	127.55	0.106	+			46198	VDYWVKAF	8	61	514.265380859375	NaN	0	514.265380859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VDYWVKAF_	ENSG00000265972|ENST00000582401|TXNIP;nc|ENSG00000265972|Q9H3M7-2|TXNIP	82.30502934623384	1.7418937515398478	6				NaN	NaN	0	NaN	14244	4726	18970
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18973	47.55	NaN	2718	30	0	169.45	0.036	+			51341	YSRQVPIPE	9	67	544.7909090833575	1087.567265233515	2	544.7939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YSRQVPIPE_	ENST00000522404.5_1_5:71537397-71616033:-|nuORF	37.81151784470057	0.4459294069877048	6				NaN	NaN	0	NaN	14245	4726	18970
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18978	47.564	NaN	3467.8	30	0	794.85	0.145			+	4544	ATLCTFLHLV	10	55	373.20987774270935	NaN	0	373.2099609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATLCTFLHLV_	REV__ENST00000401533.6_1_2:26412041-26412347:+|nuORF	22.579656572578934	0.4201028297492154	6				NaN	NaN	0	NaN	14247	4729	18977
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18983	47.58	NaN	4510.5	30	0	733.34	0.214	+			46744	VGRLILYSS	9	47	336.5344378546052	NaN	0	336.53411865234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VGRLILYSS_	ENSG00000144320|ENST00000272748|LNPK;nc|ENSG00000144320|Q9C0E8-2|LNPK;nc|ENSG00000144320|Q9C0E8-4|LNPK	31.954861631926434	0.3162336699109506	6				NaN	NaN	0	NaN	14249	4732	18982
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18984	47.584	NaN	1198.4	30	0	109.95	0.106	+			6865	CLAATLLPSL	10	56	501.2890489439821	1000.5635449547642	2	501.2894592285156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_CLAATLLPSL_	ENSG00000118094|ENST00000264029|TREH;nc|ENSG00000118094|O43280-2|TREH	28.081489160057373	0.6505064946289502	6				NaN	NaN	0	NaN	14250	4732	18982
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18985	47.586	NaN	1619.3	30	0	145.25	0.037	+			49758	VYPRPIITW	9	59	572.8294944125763	NaN	0	572.8292846679688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYPRPIITW_	ENSG00000114455|ENST00000467761|HHLA2;nc|ENSG00000114455|Q9UM44-2|HHLA2	38.753607047826485	0.28190821760017076	6				NaN	NaN	0	NaN	14251	4732	18982
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18990	47.6	NaN	1177.8	30	0	124.83	0.144			+	50915	YGLPDAPAPPG	11	53	527.7639165292657	1053.5132801253312	2	527.7655639648438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YGLPDAPAPPG_	REV__ENSG00000259956|ENST00000563281|RBM15B;REV__RBM15B|p.S844Pfs*27|2|0.54|ENSG00000259956|chr3:51393922-51393922|G/-|frameshift_variant	34.172542307311794	0.6313490974540716	6				NaN	NaN	0	NaN	14253	4735	18989
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	18997	47.633	NaN	2697	30	0	433.65	0.144			+	-1	CSFYDLFF	8	62	549.7341099483759	1097.4536669635518	2	549.7359008789062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_C(Carbamidomethyl (C))SFYDLFF_	REV__ENSG00000159131|ENST00000381815|GART;REV__ENST00000424203.5_1_21:34876433-34900844:-|nuORF;REV__GART|p.K807Gfs*26|1|0.08|ENSG00000159131|chr21:33509815-33509816|TT/-|frameshift_variant	33.51558372728122	0.7005509609380386	6				NaN	NaN	0	NaN	14254	4741	18996
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19002	47.649	NaN	2740.4	30	0	293.4	0.214			+	25188	LMCRGKVF	8	53	477.25716251491815	952.4997720966363	2	477.2581787109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LMCRGKVF_	REV__ENSG00000138375|ENST00000357276|SMARCAL1	44.53106598305862	0.628196326904373	6				NaN	NaN	0	NaN	14256	4744	19001
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19003	47.653	NaN	1750.3	30	0	124.07	0.106				-1	 	0	62	479.27614566103836	956.5377383888767	2	479.276611328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14257	4744	19001
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19004	47.655	NaN	2167.1	30	0	133.71	0.032				-1	 	0	58	382.21856404819147	762.422575163183	2	382.21893310546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14258	4744	19001
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19009	47.669	NaN	8867.7	30	0	4833.3	0.214				-1	 	0	65	412.74494703922005	823.4753411452401	2	412.7461242675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14260	4747	19008
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19010	47.673	NaN	3106.8	30	0	1318.9	0.106			+	1780	AIDCVKKR	8	47	495.28204757634734	988.5495422194947	2	495.2836608886719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_AIDC(Carbamidomethyl (C))VKKR_	REV__ENSG00000065150|ENST00000651721|IPO5;REV__nc|ENSG00000065150|O00410-2|IPO5;REV__nc|ENSG00000065150|O00410-3|IPO5	57.81127852772723	0.5234495074909924	6				NaN	NaN	0	NaN	14261	4747	19008
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19011	47.675	NaN	2474.6	30	0	182.07	0.032	+			38696	SSKKTAVS	8	68	404.2316652723183	806.4487776114366	2	404.2327880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SSKKTAVS_	DCUN1D1|p.E23K|1|0.41|ENSG00000043093|chr3:182965690-182965690|C/T|missense_variant	12.959181472943097	0.7887000251064199	6				NaN	NaN	0	NaN	14262	4747	19008
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19021	47.708	NaN	1470.7	30	0	95.632	0.214				-1	 	0	52	360.20546886882687	718.3963848044538	2	360.20654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14266	4753	19020
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19022	47.711	NaN	1363.6	30	0	207.9	0.106	+			36506	SFALFHVFF	9	57	557.793838908986	NaN	0	558.2489013671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SFALFHVFF_	ENST00000256682.8_1_12:49330571-49330871:-|nuORF	42.47446043378293	0.25855550551448697	6				NaN	NaN	0	NaN	14267	4753	19020
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19023	47.713	NaN	1214	30	0	179.36	0.034			+	23924	LDNLQPET	8	45	465.2326491984967	NaN	0	465.2320861816406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LDNLQPET_	REV__ENSG00000204616|ENST00000376734|TRIM31;REV__nc|ENSG00000204616|Q9BZY9-2|TRIM31	23.04248740728303	1.7418937515398478	6				NaN	NaN	0	NaN	14268	4753	19020
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19027	47.727	NaN	3244.2	30	0	2063.4	0.14				-1	 	0	46	390.7317430962345	779.448933259269	2	390.73284912109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14269	4756	19026
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19031	47.743	NaN	2038	30	0	180.31	0.214	+			49863	VYSRYFTTY	9	75	600.2904468884988	NaN	0	600.2908325195312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	58.22992032128504	0.15686832049467786	6				NaN	NaN	0	NaN	14270	4759	19030
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19032	47.747	NaN	2070.1	30	0	163.31	0.106	+			19202	IYYFKANVF	9	71	582.8085134621808	NaN	0	582.8086547851562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IYYFKANVF_	ENSG00000111229|ENST00000228825|ARPC3	57.81127852772723	0.15865383123342353	6				NaN	NaN	0	NaN	14271	4759	19030
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19033	47.749	NaN	1575.4	30	0	155.81	0.036	+			24356	LFLWPQKK	8	61	530.3246917225513	NaN	0	530.324951171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LFLWPQKK_	ENST00000428826.6_1_17:40854213-40854450:-|nuORF	30.503639358989545	1.7418937515398478	6				NaN	NaN	0	NaN	14272	4759	19030
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19037	47.763	NaN	2190.3	30	0	258.79	0.214			+	12127	GAGPFSSLAVF	11	62	526.7740282664773	NaN	0	526.7739868164062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GAGPFSSLAVF_	REV__ENSG00000179314|ENST00000317744|WSCD1	64.20726635412375	0.19243860075852917	6				NaN	NaN	0	NaN	14273	4762	19036
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19038	47.766	NaN	1472.1	30	0	135.41	0.106			+	-1	GLVRTPSQETM	11	62	617.810465412691	NaN	0	617.8104248046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_GLVRTPSQETM(Oxidation (M))_	REV__ENSG00000169919|ENST00000304895|GUSB;REV__nc|ENSG00000169919|P08236-2|GUSB;REV__nc|ENSG00000169919|P08236-3|GUSB	40.05817265558897	0.3867246477658885	6				NaN	NaN	0	NaN	14274	4762	19036
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19039	47.768	NaN	1395.2	30	0	166.32	0.106			+	-1	CCCDDEHD	8	39	384.77214089148964	NaN	0	384.7723388671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Acetyl (Protein N-term),3 Carbamidomethyl (C)	_(Acetyl (Protein N-term))C(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))DDEHD_	REV__ENSG00000198854|ENST00000368775|C1orf68	7.690282842768113	1.7418937515398478	6				NaN	NaN	0	NaN	14275	4762	19036
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19040	47.77	NaN	1063.4	30	0	135.13	0.032				-1	 	0	53	399.2393918498312	796.4642307664624	2	399.24053955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14276	4762	19036
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19046	47.786	NaN	1022.8	30	0	105.09	0.214	+			37591	SLPEFQQF	8	41	498.24512406472905	NaN	0	498.2452087402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SLPEFQQF_	ENSG00000124181|ENST00000685551|PLCG1;ENST00000470528.1_1_20:39791870-39791927:+|nuORF;nc|ENSG00000124181|P19174|PLCG1;PLCG1|p.L868*|1|0.36|ENSG00000124181|chr20:41169474-41169474|C/-|frameshift_variant	30.503639358989545	1.7418937515398478	6				NaN	NaN	0	NaN	14279	4765	19045
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19047	47.79	NaN	1032	30	0	171.62	0.034	+			43605	TIMKMRSP	8	44	482.26068553050936	NaN	0	482.26129150390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TIMKMRSP_	ENSG00000172362|ENST00000641921|OR5B12	40.77816245573522	1.7418937515398478	6				NaN	NaN	0	NaN	14280	4765	19045
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19051	47.804	NaN	5253.5	30	0	296.72	0.142				-1	 	0	74	457.2630568823195	912.511560831439	2	457.2640686035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14281	4768	19050
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19065	47.869	NaN	5140.2	30	0	1144	0.143				-1	 	0	67	508.80907277468185	1015.6035926161637	2	508.8104248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14283	4780	19064
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19075	47.904	NaN	3580.8	30	0	612.98	0.214			+	3789	ATAGALMARQK	11	56	373.20987774270935	NaN	0	373.2101135253906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATAGALMARQK_	REV__ENSG00000113522|ENST00000378823|RAD50;REV__nc|ENSG00000113522|Q92878-2|RAD50;REV__nc|ENSG00000113522|Q92878-3|RAD50;REV__RAD50|p.K722Gfs*5|1|0.35|ENSG00000113522|chr5:132595760-132595761|AA/-|frameshift_variant;REV__RAD50|p.N934Ifs*6|1|0.26|ENSG00000113522|chr5:132608690-132608690|A/-|frameshift_variant	27.64392233501311	0.4422187622456888	6				NaN	NaN	0	NaN	14287	4786	19074
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19076	47.907	NaN	1492.8	30	0	130.03	0.037	+			12040	FYMCVNVLF	9	59	568.26904296875	NaN	0	568.26904296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FYMCVNVLF_	ENST00000531768.1_1_11:77402049-77404650:-|nuORF	58.78195531508484	0.1545138866451181	6				NaN	NaN	0	NaN	14288	4786	19074
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19081	47.922	NaN	3917.6	30	0	802.66	0.214			+	43481	TGPALHTIVV	10	43	336.5344378546052	NaN	0	336.5343017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TGPALHTIVV_	REV__ENSG00000153048|ENST00000311052|CARHSP1	24.20275056022122	0.4201028297492154	6				NaN	NaN	0	NaN	14290	4789	19080
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19082	47.925	NaN	2551.1	30	0	428.9	0.106	+			35642	SCISFLGVLL	10	65	526.2951094106403	1050.5756658880805	2	526.2957763671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SCISFLGVLL_	ENSG00000139636|ENST00000267102|LMBR1L;ENST00000547670.5_1_12:49494396-49503620:-|nuORF;ENST00000550867.5_1_12:49494935-49504419:-|nuORF;ENST00000552141.5_1_12:49495806-49497560:-|nuORF;nc|ENSG00000139636|Q6UX01-2|LMBR1L;nc|ENSG00000139636|Q6UX01-3|LMBR1L;nc|ENSG00000139636|Q6UX01-4|LMBR1L;nc|ENSG00000139636|Q6UX01-5|LMBR1L	42.86426827375447	0.522752283233888	6				NaN	NaN	0	NaN	14291	4789	19080
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19083	47.927	NaN	2737.9	30	0	271.75	0.106	+			19120	IYLLIHNNF	9	74	573.8175572457661	1145.6205615583322	2	573.8200073242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IYLLIHNNF_	CD53|p.F56Lfs*10|1|0.16|ENSG00000143119|chr1:110892447-110892447|T/-|frameshift_variant;ENSG00000143119|ENST00000271324|CD53;ENST00000471220.5_1_1:111415857-111435203:+|nuORF;ENST00000476408.1_1_1:111422872-111441814:+|nuORF	82.24051045832904	0.08786059719216216	6				NaN	NaN	0	NaN	14292	4789	19080
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19084	47.929	NaN	1672.6	30	0	101.71	0.035	+			28547	NIQTKLER	8	62	501.2901152257875	1000.565677518375	2	501.2907409667969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_NIQTKLER_	ENST00000272427.10_1_2:72945236-72945314:-|nuORF	31.529811441608018	0.715883593221515	6				NaN	NaN	0	NaN	14293	4789	19080
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19088	47.943	NaN	4969.1	30	0	548.28	0.144			+	27839	MSVYRMTK	8	59	508.25713852557794	1014.4997241179559	2	508.2585144042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MSVYRMTK_	REV__ENST00000528944.5_1_1:145816715-145818810:-|nuORF	71.29570347882199	0.39610197767395533	6				NaN	NaN	0	NaN	14294	4792	19087
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19097	47.978	NaN	3766.9	30	0	879.5	0.214			+	7972	DSTLTGEQTM	10	62	549.7341099483759	1097.4536669635518	2	549.736572265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_DSTLTGEQTM(Oxidation (M))_	REV__ENSG00000110799|ENST00000261405|VWF;REV__ENST00000321023.5_1_12:6204574-6232125:-|nuORF;REV__nc|ENSG00000110799|P04275-2|VWF;REV__VWF|p.D1472Tfs*53|1|0.21|ENSG00000110799|chr12:6019004-6019004|C/-|frameshift_variant	44.377184641726394	0.5088115166961078	6				NaN	NaN	0	NaN	14297	4798	19096
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19098	47.981	NaN	2776.3	30	0	235.88	0.106			+	32549	QVTILGTNR	9	63	501.2901152257875	1000.565677518375	2	502.30059814453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QVTILGTNR_	REV__ENSG00000156453|ENST00000287008|PCDH1;REV__ENST00000511044.1_1_5:141242715-141245657:-|nuORF;REV__nc|ENSG00000156453|Q08174|PCDH1	38.714083909724	0.4353426683796102	6				NaN	NaN	0	NaN	14298	4798	19096
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19099	47.983	NaN	3691.3	30	0	923.12	0.106			+	4983	ATRGKGDKER	10	54	373.20987774270935	NaN	0	373.20989990234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ATRGKGDKER_	REV__ENSG00000105255|ENST00000221856|FSD1	29.170058357718403	0.40439580130713204	6				NaN	NaN	0	NaN	14299	4798	19096
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19100	47.985	NaN	2368.9	30	0	226.69	0.106	+			19068	IYGYVAEQF	9	56	545.2646405081549	1088.5147280831097	2	545.26708984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_IYGYVAEQF_	ENSG00000114902|ENST00000619898|SPCS1;ENST00000448693.2_1_3:52740223-52740934:+|nuORF;nc|ENSG00000114902|Q9Y6A9|SPCS1	99.37495909608758	0.03983967222258828	6				NaN	NaN	0	NaN	14300	4798	19096
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19101	47.987	NaN	1779.4	30	0	203.86	0.034	+			301	AAPGLIGNVM	10	46	471.7562149088559	941.4978768845118	2	471.7576599121094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AAPGLIGNVM_	ENSG00000112305|ENST00000370455|SMAP1;nc|ENSG00000112305|Q8IYB5-2|SMAP1;nc|ENSG00000112305|Q8IYB5-3|SMAP1	44.116797842482775	0.5112108506279902	6				NaN	NaN	0	NaN	14301	4798	19096
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19107	48.003	NaN	1308.5	30	0	173.61	0.214	+			2804	ARTRERLG	8	51	479.7794189453125	NaN	0	479.7794189453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ARTRERLG_	ENST00000606998.1_1_6:138189157-138189262:-|nuORF	24.20275056022122	1.7418937515398478	6				NaN	NaN	0	NaN	14304	4801	19106
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19108	48.007	NaN	1490.6	30	0	142.22	0.106				-1	IMMTRHLL	8	49	523.779034837761	NaN	0	523.779296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Oxidation (M)	_IM(Oxidation (M))M(Oxidation (M))TRHLL_	ENST00000409517.5_1_2:66688993-66796237:+|nuORF	37.15910966729921	1.7418937515398478	6				NaN	NaN	0	NaN	14305	4801	19106
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19109	48.009	NaN	2197.7	30	0	412.41	0.036	+			42141	SYPDNFLHI	9	62	553.2677513907096	1104.520949848219	2	553.2697143554688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SYPDNFLHI_	ENSG00000057663|ENST00000369076|ATG5;nc|ENSG00000057663|Q9H1Y0-2|ATG5	42.396135135203025	0.392153681582562	6				NaN	NaN	0	NaN	14306	4801	19106
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19113	48.023	NaN	594.9	30	0	38.464	0.143			+	42509	TAPLRFFL	8	36	322.19346113214664	NaN	0	322.19329833984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TAPLRFFL_	REV__nc|ENSG00000122783|Q9BWK5-2|CYREN	29.841539824830324	1.7418937515398478	6				NaN	NaN	0	NaN	14307	4804	19112
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19118	48.039	NaN	8563.3	30	0	568.86	0.214				-1	 	0	96	382.2184662569402	762.4223795806804	2	382.21954345703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14309	4807	19117
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19119	48.043	NaN	1680.5	30	0	129.77	0.035	+			40950	SVFVATFLR	9	54	520.2994111626739	1038.5842693921477	2	520.3012084960938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVFVATFLR_	ENSG00000099194|ENST00000370355|SCD	48.601550744091256	0.3193666407755445	6				NaN	NaN	0	NaN	14310	4807	19117
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19126	48.061	NaN	5551.8	30	0	811.22	0.214			+	13621	GMANSSGIMLK	11	70	554.778239022648	1107.541925112096	2	554.7800903320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GMANSSGIMLK_	REV__ENSG00000204406|ENST00000642680|MBD5;REV__MBD5|p.K1195Nfs*22|1|0.23|ENSG00000204406|chr2:148489911-148489911|A/-|frameshift_variant;REV__MBD5|p.L1216*|1|0.14|ENSG00000204406|chr2:148489974-148489974|T/-|frameshift_variant;REV__MBD5|p.P313Tfs*4|1|0.42|ENSG00000204406|chr2:148468873-148468874|-/A|frameshift_variant;REV__MBD5|p.Q1196Tfs*30|1|0.33|ENSG00000204406|chr2:148489910-148489911|-/A|frameshift_variant;REV__MBD5|p.R200Dfs*69|1|0.2|ENSG00000204406|chr2:148468537-148468537|C/-|frameshift_variant;REV__nc|ENSG00000204406|Q9P267-2|MBD5;REV__nc|ENSG00000204406|Q9P267|MBD5	55.08391021199286	0.3673379875553588	6				NaN	NaN	0	NaN	14314	4810	19125
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19127	48.064	NaN	2160.1	30	0	300.42	0.036	+			51322	YSLHTEAVW	9	65	553.2677513907096	1104.520949848219	2	553.7713012695312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YSLHTEAVW_	WDR25|p.R296W|1|0.11|ENSG00000176473|chr14:100468084-100468084|C/T|missense_variant	38.80614096846853	0.43426287593479557	6				NaN	NaN	0	NaN	14315	4810	19125
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19131	48.079	NaN	3038.2	30	0	1870.5	0.214				-1	 	0	46	390.73175188224644	779.4489508312929	2	390.7329406738281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14316	4813	19130
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19132	48.082	NaN	1257.8	30	0	109.88	0.106				-1	 	0	52	360.2054456421184	718.3963383510368	2	360.2062072753906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14317	4813	19130
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19133	48.084	NaN	1744.7	30	0	224.33	0.106	+			49864	VYSRYFTTY	9	68	600.2904468884988	NaN	0	600.291259765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	35.15202426646627	0.3000918603816441	6				NaN	NaN	0	NaN	14318	4813	19130
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19134	48.086	NaN	2618.5	30	0	208.91	0.037	+			27191	MEAHQVIKAN	10	65	578.792948337303	1155.5713437414058	2	578.79541015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_M(Oxidation (M))EAHQVIKAN_	ENSG00000005810|ENST00000544440|MYCBP2;MYCBP2|p.P4047Qfs*26|2|0.35|ENSG00000005810|chr13:77067782-77067782|G/-|frameshift_variant;MYCBP2|p.T4311Pfs*37|1|0.14|ENSG00000005810|chr13:77059619-77059619|G/-|frameshift_variant;MYCBP2|p.V3749*|1|0.12|ENSG00000005810|chr13:77081486-77081486|C/-|frameshift_variant;nc|ENSG00000005810|O75592-2|MYCBP2	56.72105179125745	0.3956618550748046	6				NaN	NaN	0	NaN	14319	4813	19130
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19138	48.1	NaN	1906.5	30	0	165.96	0.144	+			49557	VYDGKFAIF	9	57	530.2779916679228	1058.5414304026456	2	530.2802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYDGKFAIF_	ENSG00000065361|ENST00000267101|ERBB3;ENST00000546884.1_1_12:56474084-56480451:+|nuORF;ERBB3|p.A805Gfs*22|1|0.1|ENSG00000065361|chr12:56097177-56097178|-/G|frameshift_variant;ERBB3|p.A805Hfs*95|1|0.33|ENSG00000065361|chr12:56097178-56097178|G/-|frameshift_variant;ERBB3|p.R1080Vfs*22|1|0.14|ENSG00000065361|chr12:56101093-56101093|C/-|frameshift_variant;nc|ENSG00000065361|P21860-2|ERBB3;nc|ENSG00000065361|P21860-3|ERBB3;nc|ENSG00000065361|P21860-4|ERBB3	68.78682469695295	0.14603441672067394	6				NaN	NaN	0	NaN	14320	4816	19137
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19143	48.116	NaN	7925.8	30	0	1865.5	0.214	+			51433	YVALQNGKD	9	57	504.2619486970068	1006.5093444608136	2	504.2632751464844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YVALQNGKD_	ENSG00000116141|ENST00000366917|MARK1;MARK1|p.R513Q|1|0.42|ENSG00000116141|chr1:220650687-220650687|G/A|missense_variant;nc|ENSG00000116141|Q9P0L2-2|MARK1;nc|ENSG00000116141|Q9P0L2-3|MARK1	54.776311868738084	0.25715957988447635	6				NaN	NaN	0	NaN	14322	4819	19142
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19144	48.12	NaN	6166.8	30	0	465.26	0.106			+	24698	LHELLLSSQS	10	74	563.8092846134666	1125.6040162937331	2	563.8108520507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LHELLLSSQS_	REV__ENSG00000119777|ENST00000238788|TMEM214;REV__nc|ENSG00000119777|Q6NUQ4-2|TMEM214	52.936696900407355	0.4300801048568001	6				NaN	NaN	0	NaN	14323	4819	19142
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19145	48.122	NaN	1381	30	0	98.928	0.106	+			13401	GLFEKRARPVM	11	48	435.25107510756294	NaN	0	435.2509460449219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GLFEKRARPVM_	ENSG00000135972|ENST00000258455|MRPS9	19.262678746197807	0.456735970842152	6				NaN	NaN	0	NaN	14324	4819	19142
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19146	48.124	NaN	1972	30	0	175.18	0.036	+			26962	LYIVHPTMF	9	62	560.7975213502435	NaN	0	560.798095703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_LYIVHPTMF_	ARHGAP1|p.L237Cfs*135|2|0.38|ENSG00000175220|chr11:46680674-46680674|G/-|frameshift_variant;ARHGAP1|p.L237Rfs*135|1|0.37|ENSG00000175220|chr11:46680673-46680673|A/-|frameshift_variant;ENSG00000175220|ENST00000311956|ARHGAP1	57.81127852772723	0.15865383123342353	6				NaN	NaN	0	NaN	14325	4819	19142
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19150	48.138	NaN	2583.3	30	0	447.43	0.143	+			40499	STYIILVLK	9	61	525.332534579211	1048.650516225222	2	525.334716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_STYIILVLK_	ENST00000186436.9_1_2:98475819-98543905:-|nuORF	82.24051045832904	0.08786059719216216	6				NaN	NaN	0	NaN	14326	4822	19149
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19155	48.154	NaN	3124.3	30	0	204.95	0.214				-1	 	0	71	457.2630568823195	912.511560831439	2	457.26416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14328	4825	19154
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19156	48.158	NaN	1692.7	30	0	161.7	0.036	+			24286	LEYDPRIY	8	53	534.7711757150904	1067.5277984969807	2	534.7739868164062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LEYDPRIY_	ENSG00000134640|ENST00000257068|MTNR1B	42.396135135203025	0.6414440140393314	6				NaN	NaN	0	NaN	14329	4825	19154
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19160	48.172	NaN	1199.2	30	0	120.88	0.214				-1	KKTCLIQH	8	30	343.19766570240824	NaN	0	343.1974182128906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_KKTC(Carbamidomethyl (C))LIQH_	ENSG00000197619|ENST00000598071|ZNF615;nc|ENSG00000197619|Q8N8J6-3|ZNF615;nc|ENSG00000197619|Q8N8J6|ZNF615	17.364965105453717	1.7418937515398478	6				NaN	NaN	0	NaN	14330	4828	19159
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19161	48.175	NaN	1269.8	30	0	85.876	0.106				-1	PVRGAAGC	8	48	394.1975663668278	786.3805798004556	2	394.1985168457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_PVRGAAGC(Carbamidomethyl (C))_	CHRD|p.F806Lfs*5|1|0.25|ENSG00000090539|chr3:184387435-184387436|-/C|frameshift_variant;ENSG00000090539|ENST00000204604|CHRD;ENST00000460627.5_1_3:184098106-184099814:+|nuORF;ENST00000470150.5_1_3:184098136-184100834:+|nuORF;ENST00000496527.1_1_3:184098136-184098919:+|nuORF;nc|ENSG00000090539|Q9H2X0-2|CHRD;nc|ENSG00000090539|Q9H2X0-3|CHRD;nc|ENSG00000090539|Q9H2X0-4|CHRD;nc|ENSG00000090539|Q9H2X0-5|CHRD	15.63621529709179	0.7929342111279789	6				NaN	NaN	0	NaN	14331	4828	19159
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19162	48.177	NaN	1127.9	30	0	108.31	0.106				-1	 	0	63	543.2992128598429	542.2919363932428	1	543.301513671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14332	4828	19159
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19163	48.179	NaN	1253.7	30	0	104.56	0.106				-1	PCRGCPLTQ	9	61	516.2417050737703	1030.4688572143405	2	516.2421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_PC(Carbamidomethyl (C))RGCPLTQ_	ENSG00000086015|ENST00000361297|MAST2;nc|ENSG00000086015|Q6P0Q8-2|MAST2	49.44154591367651	0.3095138337212152	6				NaN	NaN	0	NaN	14333	4828	19159
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19164	48.181	NaN	2014	30	0	154.97	0.037			+	32667	RAASRESRAT	10	50	368.86967573637753	NaN	0	368.8695983886719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_RAASRESRAT_	REV__ENSG00000069020|ENST00000403625|MAST4;REV__nc|ENSG00000069020|O15021-2|MAST4;REV__nc|ENSG00000069020|O15021-3|MAST4;REV__nc|ENSG00000069020|O15021-6|MAST4	30.568863376406313	0.39980281766270914	6				NaN	NaN	0	NaN	14334	4828	19159
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19168	48.195	NaN	1645.4	30	0	112.94	0.214	+			23366	KYVTVYNLI	9	60	556.8213535785987	NaN	0	556.8212890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KYVTVYNLI_	ENSG00000138592|ENST00000307179|USP8;ENST00000558892.1_1_15:50731270-50736797:+|nuORF;ENST00000560954.5_1_15:50731270-50751199:+|nuORF;USP8|p.K997Rfs*2|1|0.11|ENSG00000138592|chr15:50497178-50497178|A/-|frameshift_variant;USP8|p.N476Tfs*19|1|0.31|ENSG00000138592|chr15:50481683-50481683|A/-|frameshift_variant;USP8|p.R138Kfs*14|1|0.27|ENSG00000138592|chr15:50459070-50459071|-/A|frameshift_variant;USP8|p.R76Kfs*3|1|0.54|ENSG00000138592|chr15:50441463-50441464|-/A|frameshift_variant	69.6276240434122	0.10825701912424071	6				NaN	NaN	0	NaN	14335	4831	19167
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19169	48.199	NaN	1477.3	30	0	178.56	0.106	+			46466	VETAQGQRF	9	48	518.2651141287273	1034.5156753242545	2	518.267333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VETAQGQRF_	ENSG00000175376|ENST00000533544|EIF1AD;ENST00000526449.1_1_11:65767491-65767878:-|nuORF	39.252832667884924	0.4290233611298554	6				NaN	NaN	0	NaN	14336	4831	19167
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19170	48.201	NaN	2153.5	30	0	294.03	0.036				-1	EMPATEKDLA	10	69	560.7637196112884	1119.5128862893766	2	560.7620239257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_EM(Oxidation (M))PATEKDLA_	ENSG00000196924|ENST00000369850|FLNA;FLNA|p.A1026Lfs*20|1|0.42|ENSG00000196924|chrX:154361439-154361439|C/-|frameshift_variant;FLNA|p.D535Mfs*34|1|0.31|ENSG00000196924|chrX:154365224-154365224|C/-|frameshift_variant;FLNA|p.G2237Efs*109|1|0.28|ENSG00000196924|chrX:154352240-154352240|C/-|frameshift_variant;FLNA|p.Q1716Sfs*23|2|0.38|ENSG00000196924|chrX:154354896-154354896|G/-|frameshift_variant;FLNA|p.R2520Vfs*16|1|0.7|ENSG00000196924|chrX:154349560-154349560|G/-|frameshift_variant;nc|ENSG00000196924|P21333-2|FLNA	30.317721548370564	0.6322445173429027	6				NaN	NaN	0	NaN	14337	4831	19167
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19176	48.217	NaN	815.77	30	0	60.123	0.214			+	21846	KRIAHGSA	8	49	420.2455431874073	NaN	0	420.24554443359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KRIAHGSA_	REV__AIFM3|p.R578H|1|0.15|ENSG00000183773|chr22:20980100-20980100|G/A|missense_variant	37.15910966729921	1.7418937515398478	6				NaN	NaN	0	NaN	14340	4834	19175
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19177	48.22	NaN	1139.7	30	0	166.11	0.106				-1	LSSCSGTT	8	44	406.67700398603466	811.3394550388693	2	406.6780700683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LSSC(Carbamidomethyl (C))SGTT_	ENSG00000164142|ENST00000435205|FHIP1A	24.20275056022122	0.7724576178584145	6				NaN	NaN	0	NaN	14341	4834	19175
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19178	48.222	NaN	957.87	30	0	94.54	0.034			+	37863	SNPHTQQL	8	44	462.7322411697695	NaN	0	462.7322082519531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_SNPHTQQL_	REV__ENSG00000172771|ENST00000505956|EFCAB12;REV__ENST00000503498.1_1_3:129120438-129130339:-|nuORF	47.657333605630114	1.7418937515398478	6				NaN	NaN	0	NaN	14342	4834	19175
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19186	48.242	NaN	2109.1	30	0	99.712	0.215	+			1642	AGPGERGSA	9	54	401.19573188124065	800.3769108292813	2	401.1968688964844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AGPGERGSA_	ENSG00000205903|ENST00000382252|ZNF316	14.864876125193954	0.6112419832031293	6				NaN	NaN	0	NaN	14347	4837	19185
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19187	48.246	NaN	2525.2	30	0	166.15	0.106			+	-1	MGAAELSL	8	51	404.2018446192886	NaN	0	404.201904296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_M(Oxidation (M))GAAELSL_	REV__ENST00000263212.9_2_22:22275932-22276091:-|nuORF	28.2542754592877	1.7418937515398478	6				NaN	NaN	0	NaN	14348	4837	19185
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19188	48.248	NaN	206.12	30	0	23.572	0.028	+			15769	GVSVVGGF	8	23	241.13587348421618	NaN	0	241.13584899902344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GVSVVGGF_	ENSG00000154814|ENST00000285083|OXNAD1;ENST00000442255.5_1_3:16313687-16345066:+|nuORF;OXNAD1|p.S112P|1|0.18|ENSG00000154814|chr3:16294899-16294899|T/C|missense_variant	12.959181472943097	1.7418937515398478	6				NaN	NaN	0	NaN	14349	4837	19185
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19194	48.264	NaN	4595.2	30	0	1012.7	0.214	+			3021	ASFDKAKLK	9	52	336.5344378546052	NaN	0	336.5342712402344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASFDKAKLK_	ENSG00000034510|ENST00000233143|TMSB10	26.69291269510374	0.34280015626154364	6				NaN	NaN	0	NaN	14352	4840	19193
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19195	48.267	NaN	3410.4	30	0	886.37	0.106			+	7490	DGGAISLI	8	56	373.20987774270935	NaN	0	373.20947265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_DGGAISLI_	REV__ENSG00000128815|ENST00000325239|WDFY4;REV__nc|ENSG00000128815|Q6ZS81-2|WDFY4;REV__nc|ENSG00000128815|Q6ZS81-3|WDFY4;REV__nc|ENSG00000128815|Q6ZS81-4|WDFY4;REV__nc|ENSG00000128815|Q6ZS81-5|WDFY4;REV__WDFY4|p.E2278Kfs*20|2|0.3|ENSG00000128815|chr10:48873577-48873577|G/-|frameshift_variant;REV__WDFY4|p.L901Sfs*22|1|0.22|ENSG00000128815|chr10:48774601-48774601|C/-|frameshift_variant;REV__WDFY4|p.Q1607Sfs*14|1|0.47|ENSG00000128815|chr10:48807934-48807934|C/-|frameshift_variant;REV__WDFY4|p.R948Tfs*54|1|0.33|ENSG00000128815|chr10:48775775-48775776|-/CA|frameshift_variant	28.2542754592877	1.7418937515398478	6				NaN	NaN	0	NaN	14353	4840	19193
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19196	48.269	NaN	2467	30	0	1216.9	0.032			+	30040	PPSKIKELQR	10	41	399.24580314840375	NaN	0	399.245849609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PPSKIKELQR_	REV__ENST00000496567.5_1_9:97782011-97782122:+|nuORF	20.030474535948922	0.4201028297492154	6				NaN	NaN	0	NaN	14354	4840	19193
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19200	48.283	NaN	3458.6	30	0	254.28	0.214			+	18010	IIGSQGRLTG	10	72	501.2901152257875	1000.565677518375	2	501.2902526855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IIGSQGRLTG_	REV__ENSG00000121904|ENST00000373381|CSMD2;REV__nc|ENSG00000121904|Q7Z408|CSMD2	48.601550744091256	0.46988609897316763	6				NaN	NaN	0	NaN	14355	4843	19199
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19201	48.287	NaN	663.73	30	0	145.76	0.034			+	6754	CDWPNGEL	8	35	467.1925005276546	NaN	0	467.1924133300781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_CDWPNGEL_	REV__ENSG00000099769|ENST00000215539|IGFALS;REV__ENSG00000179542|ENST00000356928|SLITRK4;REV__nc|ENSG00000099769|P35858-2|IGFALS	13.775330524044264	1.7418937515398478	6				NaN	NaN	0	NaN	14356	4843	19199
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19210	48.318	NaN	3000.1	30	0	526.06	0.214	+			34713	RVVIWPFSN	9	59	373.20987774270935	NaN	0	373.2099304199219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVVIWPFSN_	ENSG00000143167|ENST00000367868|GPA33	27.882242232435846	0.3367954786602879	6				NaN	NaN	0	NaN	14359	4849	19209
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19211	48.322	NaN	3174.4	30	0	201.09	0.106			+	-1	SFILLLFMA	9	65	535.8018315595039	1069.5891101858076	2	535.8033447265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_SFILLLFM(Oxidation (M))A_	REV__ENSG00000212127|ENST00000537503|TAS2R14	52.29916861842294	0.2778091507991977	6				NaN	NaN	0	NaN	14360	4849	19209
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19212	48.324	NaN	1013.1	30	0	255.25	0.031	+			17271	IAAKKKKKK	9	29	348.2552524950756	NaN	0	348.2541198730469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_IAAKKKKKK_	L1PB1_dup5905|chr7:93807211-93809400:+|2.023350116566841|0.2056128638309657|3.3|382.0|2|1|sense	10.265252068803164	0.4022383999429647	6				NaN	NaN	0	NaN	14361	4849	19209
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19216	48.338	NaN	10011	30	0	609.14	0.214				-1	 	0	85	479.2762674601447	956.5379819870894	2	479.2771301269531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14362	4852	19215
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19217	48.341	NaN	1756.8	30	0	204.27	0.106			+	-1	LLLGARACDE	10	61	559.2856363733589	1116.5567198135177	2	559.2874145507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_LLLGARAC(Carbamidomethyl (C))DE_	REV__ENSG00000084092|ENST00000264230|NOA1	32.81241826257853	0.6118718159329168	6				NaN	NaN	0	NaN	14363	4852	19215
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19218	48.343	NaN	1917.2	30	0	261.09	0.035			+	1252	AERTHVLVT	9	61	513.2909739431495	1024.567394953099	2	513.2925415039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AERTHVLVT_	REV__ENSG00000116670|ENST00000376692|MAD2L2	35.61828744233558	0.47037581924408073	6				NaN	NaN	0	NaN	14364	4852	19215
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19225	48.36	NaN	1791.8	30	0	223.04	0.14	+			29996	PPGRGGRI	8	51	405.2404484682153	NaN	0	405.2399597167969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PPGRGGRI_	DNAH5|p.I2945Rfs*76|1|0.07|ENSG00000039139|chr5:13780948-13780949|-/CATTTCTCTT|frameshift_variant	20.481830146152948	1.741893751539848	6				NaN	NaN	0	NaN	14368	4855	19224
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19230	48.376	NaN	586.12	30	0	44.167	0.215			+	20620	KGEKTKAR	8	40	459.27964057902653	NaN	0	459.2042541503906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KGEKTKAR_	REV__CHD3|p.E368Rfs*116|1|0.39|ENSG00000170004|chr17:7894438-7894438|G/-|frameshift_variant;REV__CHD3|p.L765*|1|0.31|ENSG00000170004|chr17:7899148-7899148|G/-|frameshift_variant;REV__ENSG00000170004|ENST00000330494|CHD3;REV__ENST00000572579.1_1_17:7796637-7797935:+|nuORF;REV__nc|ENSG00000170004|Q12873-2|CHD3;REV__nc|ENSG00000170004|Q12873-3|CHD3	17.364965105453717	1.7418937515398478	6				NaN	NaN	0	NaN	14370	4858	19229
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19231	48.38	NaN	786.21	30	0	78.717	0.106			+	-1	FARMKISM	8	53	508.258544921875	NaN	0	508.258544921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Oxidation (M)	_FARM(Oxidation (M))KISM(Oxidation (M))_	REV__ENST00000504771.2_1_5:118729947-118730076:+|nuORF	42.47446043378293	1.7418937515398478	6				NaN	NaN	0	NaN	14371	4858	19229
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19232	48.382	NaN	1036.5	30	0	71.926	0.031	+			24533	LGLGAAPT	8	38	350.20652417188614	NaN	0	350.20654296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LGLGAAPT_	ENST00000566056.1_1_16:30965161-30965422:+|nuORF	21.70233525837049	1.7418937515398478	6				NaN	NaN	0	NaN	14372	4858	19229
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19238	48.398	NaN	13289	30	0	10227	0.214				-1	 	0	56	370.7343565815444	739.4541602298888	2	370.73541259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14375	4861	19237
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19239	48.401	NaN	2857.1	30	0	222.8	0.106				-1	 	0	49	362.2211851541922	722.4278173751844	2	362.2220458984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14376	4861	19237
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19240	48.403	NaN	1523.3	30	0	173.91	0.037			+	9929	EQVGPSEGRGM	11	56	573.7628201544013	1145.5110873756025	2	573.7640380859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EQVGPSEGRGM_	REV__ENST00000426002.5_1_3:48514440-48514569:-|nuORF	35.17822180527639	0.6208003396870814	6				NaN	NaN	0	NaN	14377	4861	19237
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19244	48.417	NaN	10714	30	0	8176.5	0.214				-1	 	0	58	390.73175188224644	779.4489508312929	2	390.7328796386719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14378	4864	19243
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19245	48.421	NaN	2077.3	30	0	195.74	0.038	+			49865	VYSRYFTTY	9	70	600.2904468884988	NaN	0	600.289306640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	49.536043120802724	0.20989033510253738	6				NaN	NaN	0	NaN	14379	4864	19243
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19251	48.437	NaN	1246.3	30	0	112.32	0.214				-1	 	0	41	340.2081275371972	678.4017021411944	2	340.2088928222656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14382	4867	19250
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19252	48.441	NaN	1398.8	30	0	418.68	0.031				-1	 	0	33	356.2532279655571	710.4919029979142	2	356.2545166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14383	4867	19250
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19257	48.455	NaN	1636	30	0	175	0.214	+			17514	IDKTLVNKV	9	53	515.3190652029743	1028.6235774727486	2	515.3212280273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IDKTLVNKV_	ENSG00000188738|ENST00000424728|FSIP2;FSIP2|p.K6152Rfs*27|1|0.43|ENSG00000188738|chr2:185807758-185807758|A/-|frameshift_variant;FSIP2|p.K6528Nfs*5|1|0.33|ENSG00000188738|chr2:185808884-185808884|A/-|frameshift_variant;FSIP2|p.V6322*|1|0.42|ENSG00000188738|chr2:185808265-185808265|A/-|frameshift_variant	19.996771675451527	0.6112419832031292	6				NaN	NaN	0	NaN	14385	4870	19256
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19258	48.459	NaN	2134.2	30	0	167.08	0.036	+			23219	KYGMVTYLL	9	67	544.2947626607859	1086.5749723883716	2	544.2971801757812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KYGMVTYLL_	ENSG00000158669|ENST00000396987|GPAT4	45.97224482568171	0.3502073465782774	6				NaN	NaN	0	NaN	14386	4870	19256
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19263	48.473	NaN	2804.9	30	0	1395.6	0.139			+	11366	FLHLIIPLGI	10	44	379.2485475529303	NaN	0	379.2488098144531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FLHLIIPLGI_	REV__ENSG00000179363|ENST00000319560|TMEM31	24.519189625965996	0.41966695327750003	6				NaN	NaN	0	NaN	14388	4873	19262
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19267	48.489	NaN	1111	30	0	62.676	0.214				-1	 	0	53	457.2630568823195	912.511560831439	2	457.2637939453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14389	4876	19266
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19268	48.493	NaN	1294.9	30	0	98.463	0.032	+			33988	RSGGHAGM	8	45	386.6795979325011	771.3446429318022	2	386.6806640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RSGGHAGM_	ENSG00000127616|ENST00000344626|SMARCA4;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;nc|ENSG00000127616|P51532-5|SMARCA4;SMARCA4|p.G1136Afs*4|1|0.27|ENSG00000127616|chr19:11030751-11030751|G/-|frameshift_variant;SMARCA4|p.I355Sfs*56|1|0.42|ENSG00000127616|chr19:10987864-10987864|C/-|frameshift_variant;SMARCA4|p.P109Rfs*194|1|0.35|ENSG00000127616|chr19:10985372-10985372|C/-|frameshift_variant;SMARCA4|p.P1453Lfs*10|1|0.31|ENSG00000127616|chr19:11041491-11041491|C/-|frameshift_variant;SMARCA4|p.S828Lfs*117|1|0.15|ENSG00000127616|chr19:11018994-11018995|-/C|frameshift_variant	25.450171626174864	0.7628259754767981	6				NaN	NaN	0	NaN	14390	4876	19266
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19273	48.508	NaN	1087.7	30	0	186.46	0.144			+	3463	ASRTRSPPR	9	36	343.19766570240824	NaN	0	343.1977233886719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASRTRSPPR_	REV__ENST00000456357.6_1_7:97881701-97920552:+|nuORF	22.579656572578934	0.3605601358598771	6				NaN	NaN	0	NaN	14392	4879	19272
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19277	48.524	NaN	1268.6	30	0	141.82	0.143				-1	CPSRKSGVF	9	54	519.26318359375	NaN	0	519.26318359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_C(Carbamidomethyl (C))PSRKSGVF_	GSX2|p.A57V|1|0.42|ENSG00000180613|chr4:54100514-54100514|C/T|missense_variant	30.317721548370564	0.32449924987115025	6				NaN	NaN	0	NaN	14393	4882	19276
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19288	48.559	NaN	1173.6	30	0	194.7	0.214			+	10169	ESVYRLLE	8	51	504.77044988791823	1007.5263468426365	2	505.2729187011719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ESVYRLLE_	REV__ENSG00000145700|ENST00000506364|ANKRD31;REV__nc|ENSG00000145700|Q8N7Z5|ANKRD31	45.9519527083369	0.6193794311207887	6				NaN	NaN	0	NaN	14398	4888	19287
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19289	48.562	NaN	1153.5	30	0	181.84	0.037	+			51144	YNVVVSNLLF	10	50	584.322888377869	1166.631223822538	2	584.3240966796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YNVVVSNLLF_	ENST00000460731.5_1_7:77166863-77213036:+|nuORF	37.81151784470057	0.569310847604193	6				NaN	NaN	0	NaN	14399	4888	19287
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19293	48.576	NaN	2026	30	0	95.769	0.215				-1	 	0	56	421.25279716445834	840.4910413957167	2	421.25311279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14400	4891	19292
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19294	48.58	NaN	1735.4	30	0	115.17	0.036			+	50060	WFFTNSRY	8	64	560.7661779345732	NaN	0	560.7666625976562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WFFTNSRY_	REV__ABCA9|p.F1166Lfs*5|1|0.33|ENSG00000154258|chr17:68995952-68995952|A/-|frameshift_variant;REV__ABCA9|p.L1080*|1|0.43|ENSG00000154258|chr17:69008144-69008144|A/-|frameshift_variant;REV__ABCA9|p.P1249Qfs*18|1|0.17|ENSG00000154258|chr17:68990930-68990930|A/-|frameshift_variant;REV__ENSG00000154258|ENST00000340001|ABCA9;REV__ENST00000492580.1_1_17:67008011-67013901:-|nuORF;REV__nc|ENSG00000154258|Q8IUA7-3|ABCA9;REV__nc|ENSG00000154258|Q8IUA7-4|ABCA9	42.396135135203025	1.7418937515398478	6				NaN	NaN	0	NaN	14401	4891	19292
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19300	48.596	NaN	1334.9	30	0	61.46	0.143			+	28985	NSLIRLATGT	10	56	523.3025732456939	1044.5905935581877	2	523.3040771484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NSLIRLATGT_	REV__ENSG00000254415|ENST00000360844|SIGLEC14;REV__ENST00000533866.1_1_19:52146610-52148823:-|nuORF;REV__SIGLEC14|p.L365Sfs*29|1|0.68|ENSG00000254415|chr19:51643592-51643593|-/A|frameshift_variant	28.081489160057373	0.6505064946289502	6				NaN	NaN	0	NaN	14404	4894	19299
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19304	48.612	NaN	3920.6	30	0	255.68	0.214			+	36639	SGKGKSGV	8	64	360.2055979337756	718.3966429343512	2	360.20654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SGKGKSGV_	REV__nc|ENSG00000165623|P07492-3|GRP	8.822329726475273	0.7821568878176242	6				NaN	NaN	0	NaN	14405	4897	19303
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19305	48.616	NaN	2245	30	0	271.32	0.106			+	33550	RLFASVDAK	9	61	503.7894505618747	1005.5643481905494	2	503.7903747558594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RLFASVDAK_	REV__ENSG00000162711|ENST00000336119|NLRP3;REV__ENST00000474792.1_1_1:247582090-247588902:+|nuORF;REV__nc|ENSG00000162711|Q96P20-2|NLRP3;REV__nc|ENSG00000162711|Q96P20-3|NLRP3;REV__nc|ENSG00000162711|Q96P20-4|NLRP3;REV__nc|ENSG00000162711|Q96P20-5|NLRP3;REV__nc|ENSG00000162711|Q96P20-6|NLRP3;REV__nc|ENSG00000162711|Q96P20|NLRP3;REV__NLRP3|p.S735Ffs*11|1|0.08|ENSG00000162711|chr1:247429627-247429628|-/T|frameshift_variant	47.95952297671804	0.32689736945648856	6				NaN	NaN	0	NaN	14406	4897	19303
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19306	48.618	NaN	1955.3	30	0	148.3	0.036	+			11487	FPANIQVVY	9	58	525.7825927734375	NaN	0	525.7825927734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FPANIQVVY_	ENSG00000136813|ENST00000684092|ECPAS;nc|ENSG00000136813|Q5VYK3|ECPAS	40.5726180659479	0.27166212580479165	6				NaN	NaN	0	NaN	14407	4897	19303
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19310	48.632	NaN	3885.7	30	0	694.7	0.214			+	29669	PGPQALLSPK	10	54	336.5344378546052	NaN	0	336.5340881347656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PGPQALLSPK_	REV__ENSG00000147255|ENST00000361420|IGSF1;REV__nc|ENSG00000147255|Q8N6C5-2|IGSF1;REV__nc|ENSG00000147255|Q8N6C5-4|IGSF1	19.996771675451527	0.4201028297492154	6				NaN	NaN	0	NaN	14408	4900	19309
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19311	48.635	NaN	1114.7	30	0	136.2	0.035			+	18022	IILEPKSMA	9	53	501.2891939518619	1000.5638349705238	2	501.29010009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IILEPKSMA_	REV__ENSG00000197472|ENST00000339986|ZNF695;REV__nc|ENSG00000197472|Q8IW36-1|ZNF695;REV__nc|ENSG00000197472|Q8IW36-2|ZNF695;REV__nc|ENSG00000197472|Q8IW36-3|ZNF695	23.52269567125451	0.5834155526130771	6				NaN	NaN	0	NaN	14409	4900	19309
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19316	48.65	NaN	965.24	30	0	81.138	0.214				-1	MRVKVFIL	8	49	511.316837218213	1020.619121503226	2	511.318603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))RVKVFIL_	PASD1|p.N589Tfs*62|1|0.39|ENSG00000166049|chrX:151672508-151672508|A/-|frameshift_variant	28.2542754592877	0.7411748056684583	6				NaN	NaN	0	NaN	14411	4903	19315
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19317	48.654	NaN	1855	30	0	284.79	0.106	+			27491	MMARLLRTSF	10	62	613.3324584960938	NaN	0	613.3324584960938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_MMARLLRTSF_	ENSG00000137976|ENST00000370665|DNASE2B	25.125986553469783	0.41767453237088564	6				NaN	NaN	0	NaN	14412	4903	19315
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19318	48.656	NaN	1653.3	30	0	71.991	0.106				-1	CEQCEKGYNSK	11	69	673.279296875	NaN	0	673.279296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_C(Carbamidomethyl (C))EQCEKGYNSK_	ENSG00000159905|ENST00000587682|ZNF221	27.047317107675042	0.44487757903053116	6				NaN	NaN	0	NaN	14413	4903	19315
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19319	48.657	NaN	1525.7	30	0	200.9	0.036	+			27939	MVFRQRAGK	9	61	546.8071033940682	1091.5996538549364	2	546.8095092773438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_MVFRQRAGK_	ENST00000461745.5_2_3:77089448-77089580:+|nuORF	35.61828744233558	0.47037581924408073	6				NaN	NaN	0	NaN	14414	4903	19315
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19324	48.672	NaN	6325.6	30	0	4456.1	0.214				-1	 	0	51	368.71884533203894	735.4231377308779	2	368.719970703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14416	4906	19323
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19325	48.676	NaN	3939.6	30	0	725.73	0.106			+	5310	ATVLPSSA	8	55	373.20987774270935	NaN	0	373.2106018066406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATVLPSSA_	REV__ENST00000338488.8_1_9:102584219-102584522:+|nuORF	40.5726180659479	1.7418937515398478	6				NaN	NaN	0	NaN	14417	4906	19323
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19326	48.678	NaN	919.82	30	0	53.931	0.106			+	10033	ESAGPPPFVI	10	55	507.26785495977566	1012.5211569863513	2	507.26922607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ESAGPPPFVI_	REV__ENSG00000100991|ENST00000252015|TRPC4AP;REV__nc|ENSG00000100991|Q8TEL6-2|TRPC4AP	35.61828744233558	0.588957954432594	6				NaN	NaN	0	NaN	14418	4906	19323
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19327	48.679	NaN	1305.5	30	0	107.95	0.106			+	8856	EEPVLLTWV	9	56	543.3018162057833	NaN	0	543.302978515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_EEPVLLTWV_	REV__ENSG00000183378|ENST00000533663|OVCH2;REV__nc|ENSG00000183378|Q7RTZ1|OVCH2;REV__OVCH2|p.P513Lfs*3|1|0.31|ENSG00000183378|chr11:7691370-7691370|G/-|frameshift_variant;REV__OVCH2|p.S358Ffs*6|1|0.34|ENSG00000183378|chr11:7696533-7696534|-/A|frameshift_variant	37.15910966729921	0.2899585034171616	6				NaN	NaN	0	NaN	14419	4906	19323
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19328	48.681	NaN	819.66	30	0	116.3	0.106	+			28179	NAPLVNVTL	9	44	470.7769990199744	NaN	0	470.7765808105469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_NAPLVNVTL_	ENSG00000216490|ENST00000407280|IFI30;ENST00000600463.1_1_19:18285864-18288180:+|nuORF	42.86426827375447	0.2558691296974908	6				NaN	NaN	0	NaN	14420	4906	19323
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19329	48.683	NaN	1296.1	30	0	164.38	0.106	+			10887	FCIPLYVPY	9	59	557.7884729576906	NaN	0	557.78759765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_FCIPLYVPY_	ENSG00000101180|ENST00000340177|HRH3;nc|ENSG00000101180|Q9Y5N1-2|HRH3;nc|ENSG00000101180|Q9Y5N1-3|HRH3;nc|ENSG00000101180|Q9Y5N1-5|HRH3;nc|ENSG00000101180|Q9Y5N1-6|HRH3;nc|ENSG00000101180|Q9Y5N1-7|HRH3	37.15910966729921	0.2899585034171616	6				NaN	NaN	0	NaN	14421	4906	19323
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19330	48.685	NaN	769.48	30	0	67.791	0.038	+			28009	MWAQGGTWAW	10	44	597.2631000261256	NaN	0	597.2623901367188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_MWAQGGTWAW_	ENST00000360168.7_1_12:6484086-6484212:-|nuORF	18.262085536374414	0.4201028297492154	6				NaN	NaN	0	NaN	14422	4906	19323
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19336	48.7	NaN	7014.5	30	0	430.41	0.142				-1	 	0	85	479.2762674601447	956.5379819870894	2	479.2779235839844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14425	4909	19335
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19347	48.736	NaN	4477	30	0	2724.4	0.214				-1	 	0	47	370.7343565815444	739.4541602298888	2	370.7355651855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14430	4915	19346
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19348	48.74	NaN	4302.5	30	0	472.4	0.035			+	51215	YPSYAVNLGG	10	63	520.7560021373605	1039.497451341521	2	520.7586669921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YPSYAVNLGG_	REV__ENSG00000119682|ENST00000356357|AREL1;REV__ENST00000469797.5_1_14:75137455-75152321:-|nuORF;REV__ENST00000557401.5_1_14:75130603-75152321:-|nuORF;REV__nc|ENSG00000119682|O15033-2|AREL1	64.20726635412375	0.3275756395432415	6				NaN	NaN	0	NaN	14431	4915	19346
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19352	48.754	NaN	1690.9	30	0	191.28	0.213			+	51498	YVNIDDPLHN	10	66	600.2886915727713	1198.5628302123425	2	600.2916870117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YVNIDDPLHN_	REV__LGMN|p.N201D|1|0.29|ENSG00000100600|chr14:92712814-92712814|T/C|missense_variant	45.97224482568171	0.49411383603842696	6				NaN	NaN	0	NaN	14432	4918	19351
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19353	48.758	NaN	1534.1	30	0	150.78	0.037	+			45669	TYYRGFLTL	9	58	567.3016595415025	1132.588766149805	2	567.3042602539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_TYYRGFLTL_	ENSG00000140025|ENST00000316738|EFCAB11;ENST00000553871.5_1_14:90263589-90418750:-|nuORF;ENST00000554761.5_1_14:90397883-90418750:-|nuORF;ENST00000556639.5_1_14:90302986-90416480:-|nuORF;nc|ENSG00000140025|Q9BUY7-2|EFCAB11;nc|ENSG00000140025|Q9BUY7-3|EFCAB11;nc|ENSG00000140025|Q9BUY7-5|EFCAB11;nc|ENSG00000140025|Q9BUY7-6|EFCAB11	34.08650109265054	0.48469117675810086	6				NaN	NaN	0	NaN	14433	4918	19351
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19363	48.791	NaN	2161.5	30	0	781.1	0.214				-1	 	0	46	390.73185488400065	779.4491568348013	2	390.73291015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14437	4924	19362
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19364	48.794	NaN	3765.4	30	0	1339.1	0.04			+	-1	CYGLVQKNQKH	11	77	687.851575964291	1373.6885989953819	2	687.8536376953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_C(Carbamidomethyl (C))YGLVQKNQKH_	REV__ENSG00000110011|ENST00000628077|DNAJC4;REV__ENST00000537109.1_1_11:63999814-64000338:+|nuORF;REV__ENST00000542376.5_1_11:63999367-64000338:+|nuORF;REV__ENST00000543791.5_1_11:63999367-64000338:+|nuORF	23.52269567125451	0.7430573033454468	6				NaN	NaN	0	NaN	14438	4924	19362
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19369	48.809	NaN	1992.6	30	0	518.64	0.214				-1	 	0	56	606.8247655414722	1211.6349781497443	2	606.826416015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14440	4927	19368
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19370	48.812	NaN	1721.1	30	0	231.95	0.106			+	24530	LGLFWTYK	8	49	514.2842159430139	1026.5538789528277	2	514.28564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LGLFWTYK_	REV__tr|U7SNL5|U7SNL5_FUSNUNa+/H+antiporterNhaC-likeC-terminaldomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01803PE=4SV=1	68.484700416344	0.4195245774506064	6				NaN	NaN	0	NaN	14441	4927	19368
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19371	48.814	NaN	2214.3	30	0	510.25	0.106			+	51432	YVAIMIDLI	9	60	525.7987539915873	1049.5829550499745	2	525.8007202148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YVAIMIDLI_	REV__ENST00000432641.2_1_7:96810621-96810783:+|nuORF	18.324413293986947	0.6112419832031293	6				NaN	NaN	0	NaN	14442	4927	19368
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19372	48.816	NaN	2025.7	30	0	155.04	0.106	+			50976	YILAKSRS	8	53	469.27755888844086	936.5405648436818	2	469.27899169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YILAKSRS_	ENSG00000188162|ENST00000399397|OTOG;nc|ENSG00000188162|Q6ZRI0|OTOG;OTOG|p.Q1138Rfs*24|1|0.12|ENSG00000188162|chr11:17594130-17594130|C/-|frameshift_variant	40.5726180659479	0.6527593143185008	6				NaN	NaN	0	NaN	14443	4927	19368
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19373	48.818	NaN	1969.9	30	0	410.23	0.106				-1	 	0	45	444.77236481176567	887.5301766903314	2	444.7735290527344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14444	4927	19368
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19374	48.82	NaN	2853.8	30	0	349.35	0.106			+	26989	LYMLRLFK	8	65	542.3242055091996	1082.633858085199	2	542.32568359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LYMLRLFK_	REV__CYP2E1|p.N238Mfs*5|1|0.19|ENSG00000130649|chr10:133532751-133532751|A/-|frameshift_variant;REV__ENSG00000130649|ENST00000252945|CYP2E1;REV__ENST00000368520.1_1_10:135345455-135368187:+|nuORF	28.2542754592877	0.7411748056684583	6				NaN	NaN	0	NaN	14445	4927	19368
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19375	48.822	NaN	2740.6	30	0	300.58	0.037	+			48005	VSQSHSKTLW	10	72	586.8070189018982	1171.5994848705964	2	586.8085327148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_VSQSHSKTLW_	ENSG00000268480|ENST00000691075|NFILZ	36.446750945000026	0.5818864909973037	6				NaN	NaN	0	NaN	14446	4927	19368
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19381	48.836	NaN	1662.7	30	0	574.66	0.141				-1	 	0	50	434.7581073092085	867.5016616852171	2	435.2601013183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14449	4930	19380
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19395	48.888	NaN	1204.4	30	0	141.34	0.214				-1	VPCKTLGPR	9	35	343.19766570240824	NaN	0	343.1973876953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_VPC(Carbamidomethyl (C))KTLGPR_	ENST00000392144.5_1_19:38145708-38146127:-|nuORF	19.1035232394073	0.3723251548669699	6				NaN	NaN	0	NaN	14454	4939	19394
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19396	48.892	NaN	1788.7	30	0	125	0.036			+	31257	QHMKMVLLS	9	56	543.7941369400568	1085.5737209469135	2	543.795166015625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_QHMKMVLLS_	REV__ENST00000443101.6_1_7:112077294-112095874:+|nuORF;REV__ENST00000476927.5_1_7:112091109-112095874:+|nuORF	37.15910966729921	0.4535818937225704	6				NaN	NaN	0	NaN	14455	4939	19394
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19404	48.91	NaN	1221.6	30	0	104.24	0.214	+			23338	KYSPFVVSF	9	56	537.2858429495731	1072.557132965946	2	537.7892456054688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KYSPFVVSF_	ENSG00000086544|ENST00000263370|ITPKC	37.81151784470057	0.4459294069877048	6				NaN	NaN	0	NaN	14460	4942	19403
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19405	48.914	NaN	1512.7	30	0	158.27	0.036	+			28109	NAGEKFLRK	9	56	531.8094760056555	NaN	0	531.8099365234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NAGEKFLRK_	ZBTB41|p.H239Tfs*24|2|0.36|ENSG00000177888|chr1:197199759-197199760|-/T|frameshift_variant	24.519189625965996	0.35377483217337163	6				NaN	NaN	0	NaN	14461	4942	19403
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19410	48.928	NaN	952.18	30	0	72.096	0.145				-1	LGFHLLCFFM	10	49	622.3064348478405	NaN	0	622.3043823242188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LGFHLLCFFM(Oxidation (M))_	ENSG00000143771|ENST00000465271|CNIH4	26.79610172149135	0.4121907004225123	6				NaN	NaN	0	NaN	14463	4945	19409
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19414	48.944	NaN	1784.5	30	0	83.032	0.143				-1	 	0	66	523.3021977861471	1044.589842639094	2	523.3028564453125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14464	4948	19413
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19418	48.96	NaN	2002.9	30	0	120.24	0.139	+			12159	GAKKASAS	8	53	360.2055979337756	718.3966429343512	2	360.2063293457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GAKKASAS_	ARHGEF10L|p.P650Hfs*34|1|0.39|ENSG00000074964|chr1:17637904-17637904|C/-|frameshift_variant;ENSG00000074964|ENST00000361221|ARHGEF10L;ENST00000469726.5_1_1:17942561-18023872:+|nuORF;nc|ENSG00000074964|Q9HCE6-2|ARHGEF10L;nc|ENSG00000074964|Q9HCE6-3|ARHGEF10L;nc|ENSG00000074964|Q9HCE6-4|ARHGEF10L;nc|ENSG00000074964|Q9HCE6-5|ARHGEF10L	12.206847966760668	0.7875100812264838	6				NaN	NaN	0	NaN	14465	4951	19417
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19422	48.976	NaN	1230.8	30	0	201.4	0.143			+	35289	SALVVPSILC	10	51	501.2891939518619	1000.5638349705238	2	501.29058837890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SALVVPSILC_	REV__ENSG00000125384|ENST00000245457|PTGER2	31.634271133179894	0.6214930414500597	6				NaN	NaN	0	NaN	14466	4954	19421
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19426	48.992	NaN	3458.6	30	0	651.76	0.214	+			35210	SAKKVYGAAI	10	41	336.5344378546052	NaN	0	336.5340881347656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAKKVYGAAI_	DENND4C|p.F1650Yfs*12|1|0.38|ENSG00000137145|chr9:19358095-19358096|TT/-|frameshift_variant;DENND4C|p.R1677Dfs*12|1|0.24|ENSG00000137145|chr9:19360255-19360255|A/-|frameshift_variant;ENSG00000137145|ENST00000434457|DENND4C;ENST00000380437.8_1_9:19290781-19335045:+|nuORF;nc|ENSG00000137145|Q5VZ89-3|DENND4C;nc|ENSG00000137145|Q5VZ89-5|DENND4C;nc|ENSG00000137145|Q5VZ89|DENND4C	24.20275056022122	0.4201028297492154	6				NaN	NaN	0	NaN	14467	4957	19425
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19427	48.996	NaN	958.16	30	0	117.93	0.106			+	24643	LGSVPGGL	8	35	350.20656790271863	NaN	0	350.20623779296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_LGSVPGGL_	REV__ENSG00000185664|ENST00000548747|PMEL;REV__nc|ENSG00000185664|P40967-2|PMEL;REV__nc|ENSG00000185664|P40967-3|PMEL;REV__nc|ENSG00000185664|P40967-4|PMEL;REV__nc|ENSG00000185664|P40967-5|PMEL;REV__PMEL|p.M184Pfs*4|1|0.28|ENSG00000185664|chr12:55958005-55958006|-/GT|frameshift_variant	31.57888975003103	1.7418937515398478	6				NaN	NaN	0	NaN	14468	4957	19425
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19428	48.997	NaN	1709.8	30	0	149.62	0.038	+			27014	LYRLQFNEF	9	58	615.3199616321218	NaN	0	615.3192138671875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LYRLQFNEF_	ENSG00000122644|ENST00000651779|ARL4A;ENST00000404372.1_1_6:151256177-151256594:+|nuORF	35.15202426646627	0.3000918603816441	6				NaN	NaN	0	NaN	14469	4957	19425
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19433	49.012	NaN	2717.9	30	0	155.08	0.214			+	38697	SSKKVTSA	8	54	404.23148991346477	806.4484268937296	2	404.2330017089844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SSKKVTSA_	REV__ENSG00000187833|ENST00000409561|C2orf78	16.473147378115264	0.7942579620968672	6				NaN	NaN	0	NaN	14471	4960	19432
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19434	49.016	NaN	3096.2	30	0	747.91	0.037	+			29849	PLAVSSAT	8	49	373.20987774270935	NaN	0	373.2099609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PLAVSSAT_	ENSG00000145113|ENST00000463781|MUC4;MUC4|p.N4902Tfs*8|1|0.37|ENSG00000145113|chr3:195761027-195761027|T/-|frameshift_variant;nc|ENSG00000145113|Q99102-10|MUC4;nc|ENSG00000145113|Q99102-11|MUC4;nc|ENSG00000145113|Q99102-15|MUC4;nc|ENSG00000145113|Q99102-16|MUC4;nc|ENSG00000145113|Q99102-17|MUC4;nc|ENSG00000145113|Q99102-2|MUC4;nc|ENSG00000145113|Q99102-3|MUC4;nc|ENSG00000145113|Q99102-5|MUC4;nc|ENSG00000145113|Q99102-7|MUC4;nc|ENSG00000145113|Q99102-8|MUC4;nc|ENSG00000145113|Q99102-9|MUC4	26.79610172149135	1.7418937515398478	6				NaN	NaN	0	NaN	14472	4960	19432
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19442	49.046	NaN	3958	30	0	190.06	0.214				-1	 	0	73	479.2762674601447	956.5379819870894	2	479.2769470214844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14474	4966	19441
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19443	49.049	NaN	2361.7	30	0	1209.7	0.032	+			30009	PPKRRGGG	8	52	412.74606167503606	NaN	0	412.74603271484375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PPKRRGGG_	ENSG00000142661|ENST00000374434|MYOM3;nc|ENSG00000142661|Q5VTT5-2|MYOM3	9.47055586587303	1.741893751539848	6				NaN	NaN	0	NaN	14475	4966	19441
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19448	49.064	NaN	2538.6	30	0	378.67	0.214			+	26478	LTLKGVKSGTG	11	59	530.822058772506	1059.629564611812	2	530.8237915039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LTLKGVKSGTG_	REV__ENSG00000183207|ENST00000595090|RUVBL2;REV__ENST00000594017.5_1_19:49497156-49513425:+|nuORF;REV__ENST00000596247.5_1_19:49507512-49519096:+|nuORF;REV__nc|ENSG00000183207|Q9Y230-2|RUVBL2	47.95952297671804	0.44903247279694136	6				NaN	NaN	0	NaN	14477	4969	19447
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19449	49.068	NaN	1176.8	30	0	105.35	0.031	+			9523	ELAIPKNPAS	10	41	347.1986358986196	NaN	0	347.19854736328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ELAIPKNPAS_	ENSG00000104369|ENST00000342232|JPH1	15.641811463095205	0.4201028297492154	6				NaN	NaN	0	NaN	14478	4969	19447
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19453	49.082	NaN	1381	30	0	95.914	0.141	+			32702	RAHVAALGG	9	54	426.24472474314865	850.4748965530973	2	426.2455139160156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RAHVAALGG_	ENSG00000111731|ENST00000446597|C2CD5;nc|ENSG00000111731|Q86YS7-2|C2CD5;nc|ENSG00000111731|Q86YS7-4|C2CD5;nc|ENSG00000111731|Q86YS7-5|C2CD5;nc|ENSG00000111731|Q86YS7|C2CD5	20.481830146152948	0.6112419832031293	6				NaN	NaN	0	NaN	14479	4972	19452
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19459	49.1	NaN	1407	30	0	124.87	0.214	+			49856	VYSRYFTTY	9	59	600.2885702057553	1198.5625874783104	2	600.2894287109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	60.97194046774394	0.20551255781574032	6				NaN	NaN	0	NaN	14482	4975	19458
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19460	49.103	NaN	1400.3	30	0	237.38	0.038	+			29100	NTMTLGDIVFK	11	61	619.8242959785787	1237.6340390239573	2	619.8267822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NTMTLGDIVFK_	ENSG00000163586|ENST00000295834|FABP1;nc|ENSG00000170325|Q9NQV6-6|PRDM10	45.908116695636124	0.4771019740774998	6				NaN	NaN	0	NaN	14483	4975	19458
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19464	49.118	NaN	1438	30	0	157.4	0.142			+	31165	QGKEFVSL	8	46	454.2474515336	NaN	0	454.248291015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QGKEFVSL_	REV__ENST00000322684.7_1_17:55709752-55709833:+|nuORF	42.396135135203025	1.7418937515398478	6				NaN	NaN	0	NaN	14484	4978	19463
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19468	49.133	NaN	3100.8	30	0	718.51	0.145			+	-1	AGARRGMTLIG	11	55	373.54404538721474	NaN	0	373.5439147949219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_AGARRGM(Oxidation (M))TLIG_	REV__ENSG00000161610|ENST00000293330|HCRT	24.231819034082204	0.456735970842152	6				NaN	NaN	0	NaN	14485	4981	19467
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19472	49.15	NaN	1783.8	30	0	213.72	0.145	+			46719	VGMDDFLGIY	10	64	565.2654233463228	1128.5162937594455	2	565.267822265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VGMDDFLGIY_	TLE6|p.V527I|1|0.06|ENSG00000104953|chr19:2994060-2994060|G/A|missense_variant	31.954861631926434	0.6188749698950511	6				NaN	NaN	0	NaN	14486	4984	19471
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19497	49.264	NaN	1872.9	30	0	236.03	0.144	+			26955	LYIIQNNSF	9	64	556.2913217976761	1110.5680906621521	2	556.2928466796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LYIIQNNSF_	ENSG00000083097|ENST00000349129|DOP1A	79.71258880314673	0.09879134589249085	6				NaN	NaN	0	NaN	14490	5005	19496
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19501	49.28	NaN	3362.6	30	0	195.83	0.214	+			28942	NRRRASKAS	9	73	523.3021977861471	1044.589842639094	2	523.3037719726562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NRRRASKAS_	ENSG00000134686|ENST00000683057|PHC2;ENST00000467894.5_1_1:33790468-33797238:-|nuORF;ENST00000485928.5_1_1:33791428-33799821:-|nuORF;nc|ENSG00000134686|Q8IXK0-2|PHC2;nc|ENSG00000134686|Q8IXK0-3|PHC2;nc|ENSG00000134686|Q8IXK0-4|PHC2;nc|ENSG00000134686|Q8IXK0|PHC2	29.14955571784316	0.5308295550522326	6				NaN	NaN	0	NaN	14491	5008	19500
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19502	49.284	NaN	1262	30	0	65.227	0.032			+	29839	PLALAHLA	8	46	403.2500915527344	NaN	0	403.2500915527344	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PLALAHLA_	REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	24.504012794735996	1.7418937515398478	6				NaN	NaN	0	NaN	14492	5008	19500
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19509	49.314	NaN	7506.4	30	0	478.13	0.214	+			12006	FVVIFITY	8	76	501.2890643353863	1000.5635757375726	2	501.2905578613281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FVVIFITY_	ENSG00000198513|ENST00000358385|ATL1;nc|ENSG00000198513|Q8WXF7-2|ATL1	24.20275056022122	0.7724576178584145	6				NaN	NaN	0	NaN	14493	5014	19508
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19510	49.318	NaN	1538.7	30	0	125.72	0.106			+	2190	ALNGSLQKGY	10	56	525.7817993164062	NaN	0	525.7817993164062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ALNGSLQKGY_	REV__tr|U7T051|U7T051_FUSNURelEproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00728PE=3SV=1	26.69291269510374	0.4125295221340092	6				NaN	NaN	0	NaN	14494	5014	19508
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19511	49.32	NaN	1361.3	30	0	60.425	0.031	+			23566	LALGQNKPHT	10	42	360.2063069737506	NaN	0	360.2058410644531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LALGQNKPHT_	ENSG00000141200|ENST00000268919|KIF2B;KIF2B|p.K542Nfs*2|2|0.38|ENSG00000141200|chr17:53824653-53824653|A/-|frameshift_variant	15.641811463095205	0.4201028297492154	6				NaN	NaN	0	NaN	14495	5014	19508
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19515	49.334	NaN	3572	30	0	757.24	0.214			+	33348	RHGLQQRL	8	42	336.5344378546052	NaN	0	336.5344543457031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RHGLQQRL_	REV__ENSG00000240771|ENST00000286494|ARHGEF25;REV__nc|ENSG00000240771|Q86VW2-2|ARHGEF25;REV__nc|ENSG00000240771|Q86VW2-3|ARHGEF25	19.359975847455235	1.7418937515398478	6				NaN	NaN	0	NaN	14496	5017	19514
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19516	49.337	NaN	1368.9	30	0	152.79	0.035	+			37668	SLRHGRAPL	9	58	503.7970826375525	1005.579612341905	2	503.8004455566406	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SLRHGRAPL_	ENSG00000156232|ENST00000286760|WHAMM	23.04248740728303	0.5879033540491928	6				NaN	NaN	0	NaN	14497	5017	19514
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19520	49.352	NaN	3147.6	30	0	166.02	0.214				-1	 	0	63	404.2315655343876	806.4485781355752	2	404.23260498046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14498	5020	19519
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19521	49.355	NaN	6024.6	30	0	4590.7	0.106				-1	 	0	45	467.19174893749846	932.3689449417969	2	467.19219970703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14499	5020	19519
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19522	49.357	NaN	2496.5	30	0	288.68	0.106	+			32677	RAERSRSPL	9	64	536.304370824152	1070.5941887151039	2	536.3053588867188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RAERSRSPL_	ENSG00000131263|ENST00000332687|RLIM;nc|ENSG00000131263|Q9NVW2-2|RLIM	58.78195531508484	0.22376836668196862	6				NaN	NaN	0	NaN	14500	5020	19519
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19523	49.359	NaN	1469	30	0	88.798	0.036				-1	MSQPDEITAL	10	64	560.7633944132019	1119.5122358932038	2	560.7646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_M(Oxidation (M))SQPDEITAL_	ENST00000251343.9_1_14:24909102-24909138:+|nuORF	31.529811441608018	0.6223461015008678	6				NaN	NaN	0	NaN	14501	5020	19519
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19533	49.392	NaN	37036	30	0	26861	0.214				-1	 	0	79	412.7449057356904	823.4752585381808	2	412.7459411621094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14505	5026	19532
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19534	49.395	NaN	1463.2	30	0	90.177	0.106				-1	 	0	61	479.2762674601447	956.5379819870894	2	479.27685546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14506	5026	19532
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19535	49.397	NaN	2773.8	30	0	1713	0.106				-1	 	0	45	459.20262745109153	916.3907019689831	2	459.2045593261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14507	5026	19532
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19536	49.399	NaN	3589.3	30	0	797.27	0.106				-1	KRKGKEPGMA	10	55	373.20987774270935	NaN	0	373.20965576171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_KRKGKEPGM(Oxidation (M))A_	ENSG00000189190|ENST00000692063|ZNF600;ENSG00000213020|ENST00000652185|ZNF611;ENSG00000258405|ENST00000421239|ZNF578;ENST00000338230.3_2_19:53271007-53282141:-|nuORF;ENST00000453741.6_1_19:53210099-53219147:-|nuORF;ZNF578|p.D120Mfs*16|1|0.32|ENSG00000258405|chr19:52510734-52510734|A/-|frameshift_variant;ZNF578|p.M89Dfs*6|1|0.04|ENSG00000258405|chr19:52510642-52510643|-/G|frameshift_variant;ZNF611|p.F463Lfs*36|1|0.09|ENSG00000213020|chr19:52705666-52705666|A/-|frameshift_variant;ZNF611|p.K221Nfs*6|1|0.35|ENSG00000213020|chr19:52706392-52706392|T/-|frameshift_variant	23.52269567125451	0.42010282974921537	6				NaN	NaN	0	NaN	14508	5026	19532
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19537	49.401	NaN	1400.2	30	0	250.06	0.035				-1	FCCFMGCD	8	46	491.6500712185936	981.2855895039872	2	491.65106201171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_FCC(Carbamidomethyl (C))FMGCD_	ENSG00000089486|ENST00000567695|CDIP1;nc|ENSG00000089486|Q9H305-2|CDIP1;nc|ENSG00000089486|Q9H305-3|CDIP1	4.6817480819748125	0.7764044737779935	6				NaN	NaN	0	NaN	14509	5026	19532
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19541	49.415	NaN	2642.5	30	0	141.56	0.214	+			28925	NRGPVSVC	8	64	416.2110480340937	830.4075431349875	2	416.21197509765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NRGPVSVC_	ENST00000563332.6_1_16:4561236-4561575:-|nuORF	30.503639358989545	0.7238069182250283	6				NaN	NaN	0	NaN	14510	5029	19540
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19542	49.419	NaN	3915.5	30	0	2934.9	0.106				-1	 	0	42	421.2579379177585	840.501322902317	2	421.2591857910156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14511	5029	19540
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19543	49.421	NaN	3243.2	30	0	340.23	0.035	+			6742	CCIQIFSL	8	65	520.7510917464268	1039.4876305596536	2	521.2506103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))C(Carbamidomethyl (C))IQIFSL_	ENSG00000160767|ENST00000361361|ENTREP3;ENST00000481822.1_1_1:155223346-155224854:-|nuORF;nc|ENSG00000160767|P81408-2|ENTREP3;nc|ENSG00000160767|P81408-3|ENTREP3;nc|ENSG00000160767|P81408-4|ENTREP3	45.9519527083369	0.6193794311207887	6				NaN	NaN	0	NaN	14512	5029	19540
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19549	49.435	NaN	2256.3	30	0	341.21	0.214			+	5061	ATSHLLDLR	9	68	513.2908253217255	1024.567097710251	2	513.291259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSHLLDLR_	REV__ENSG00000196664|ENST00000380659|TLR7;REV__TLR7|p.F670Lfs*8|1|0.32|ENSG00000196664|chrX:12887514-12887514|T/-|frameshift_variant;REV__TLR7|p.N1031Kfs*16|1|0.05|ENSG00000196664|chrX:12888600-12888601|-/ATATCAAGATAAT|frameshift_variant	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	14515	5032	19548
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19550	49.439	NaN	2649.5	30	0	225.39	0.106	+			34863	RYSVFFQSL	9	63	573.7991552326848	1145.5837575321696	2	573.7991943359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RYSVFFQSL_	ENSG00000163636|ENST00000295901|PSMD6;ENST00000476464.5_1_3:63996346-64008248:-|nuORF;ENST00000497315.5_1_3:64004227-64005057:-|nuORF;nc|ENSG00000163636|Q15008-2|PSMD6;nc|ENSG00000163636|Q15008-3|PSMD6;nc|ENSG00000163636|Q15008-4|PSMD6	59.93077597824379	0.21419174904018318	6				NaN	NaN	0	NaN	14516	5032	19548
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19551	49.441	NaN	1858.9	30	0	89.263	0.106	+			11659	FQNDVKANTY	10	64	600.2884169988437	1198.5622810644873	2	600.2904663085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FQNDVKANTY_	ENSG00000157423|ENST00000393567|HYDIN;ENST00000309900.11_1_16:70928350-70955090:-|nuORF;HYDIN|p.F4256Vfs*111|1|0.27|ENSG00000157423|chr16:70849833-70849834|-/C|frameshift_variant;HYDIN|p.V3416Gfs*64|1|0.15|ENSG00000157423|chr16:70879725-70879726|-/ACTCC|frameshift_variant	45.97224482568171	0.49411383603842696	6				NaN	NaN	0	NaN	14517	5032	19548
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19552	49.443	NaN	1958.5	30	0	153.15	0.106				-1	VQKTCIWAV	9	46	368.86962069100764	NaN	0	368.86944580078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_VQKTC(Carbamidomethyl (C))IWAV_	nc|ENSG00000162772|P18847-3|ATF3;nc|ENSG00000162772|P18847-4|ATF3	37.81151784470057	0.28666463014928195	6				NaN	NaN	0	NaN	14518	5032	19548
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19553	49.445	NaN	1021.2	30	0	56.794	0.033	+			1539	AGCPPGPRP	9	51	426.2146726972928	NaN	0	426.214599609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AGCPPGPRP_	ENST00000530490.1_1_11:17035717-17073753:+|nuORF	26.79610172149135	0.34227917631780574	6				NaN	NaN	0	NaN	14519	5032	19548
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19560	49.462	NaN	1447.7	30	0	172.6	0.214	+			29347	NYVGPAKVI	9	47	480.7789952403576	NaN	0	480.7789306640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NYVGPAKVI_	ENSG00000109320|ENST00000226574|NFKB1;nc|ENSG00000109320|P19838|NFKB1;NFKB1|p.I888Sfs*8|1|0.09|ENSG00000109320|chr4:102613497-102613497|A/-|frameshift_variant	37.15910966729921	0.2899585034171616	6				NaN	NaN	0	NaN	14523	5035	19559
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19561	49.466	NaN	1982	30	0	1329.8	0.106				-1	 	0	26	318.12201081842323	634.2294687036465	2	318.1232604980469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14524	5035	19559
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19562	49.468	NaN	1176	30	0	206.79	0.106			+	2385	ANQAAAGRRL	10	36	343.19766570240824	NaN	0	343.197998046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_ANQAAAGRRL_	REV__ENST00000464413.1_1_2:99426225-99438629:-|nuORF	29.170058357718403	0.40439580130713204	6				NaN	NaN	0	NaN	14525	5035	19559
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19563	49.47	NaN	1964.6	30	0	373.89	0.106			+	-1	CWFCCCCCHV	10	67	660.7037149861255	NaN	0	660.7041015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_CWFCCC(Carbamidomethyl (C))CC(Carbamidomethyl (C))HV_	REV__ENST00000316660.6_1_18:57570359-57570470:+|nuORF	12.959181472943097	0.4201028297492154	6				NaN	NaN	0	NaN	14526	5035	19559
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19564	49.472	NaN	1508.2	30	0	544.48	0.106				-1	 	0	33	310.13241982697946	618.2502867207589	2	310.13372802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14527	5035	19559
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19565	49.473	NaN	1385.4	30	0	254.83	0.035				-1	MAPAGCCCCC	10	54	510.135626081099	NaN	0	510.1351013183594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))M(Oxidation (M))APAGCCCCC_	ENSG00000143643|ENST00000366661|TTC13;nc|ENSG00000143643|Q8NBP0-2|TTC13;TTC13|p.R627Nfs*8|1|0.19|ENSG00000143643|chr1:230921438-230921439|TC/-|frameshift_variant	7.690282842768113	0.42010282974921537	6				NaN	NaN	0	NaN	14528	5035	19559
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19570	49.488	NaN	2216.7	30	0	166.06	0.214			+	4556	ATLEDLVLL	9	57	493.7909105037117	985.5672680742234	2	493.7925109863281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATLEDLVLL_	REV__tr|U7T8D7|U7T8D7_FUSNUTypeIVsecretionsystemproteinVirD4OS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00019PE=3SV=1	45.9519527083369	0.35044536499095585	6				NaN	NaN	0	NaN	14530	5038	19569
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19571	49.491	NaN	1291.6	30	0	349.55	0.106				-1	 	0	45	475.17640695954447	474.1691304929445	1	475.1803894042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14531	5038	19569
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19572	49.493	NaN	2433.3	30	0	150.92	0.106			+	49046	VVIIMLIWC	9	64	545.3149365314914	NaN	0	545.3097534179688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_VVIIMLIWC_	REV__ENSG00000007062|ENST00000447510|PROM1;REV__nc|ENSG00000007062|O43490-2|PROM1;REV__nc|ENSG00000007062|O43490-3|PROM1;REV__nc|ENSG00000007062|O43490-4|PROM1;REV__nc|ENSG00000007062|O43490-5|PROM1;REV__nc|ENSG00000007062|O43490-6|PROM1;REV__nc|ENSG00000007062|O43490-7|PROM1	29.841539824830324	0.32690339240668626	6				NaN	NaN	0	NaN	14532	5038	19569
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19573	49.495	NaN	2376.4	30	0	393.67	0.106				-1	HCCCCCFWC	9	63	668.1883024943115	NaN	0	668.1878662109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	4 Carbamidomethyl (C)	_HC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))CC(Carbamidomethyl (C))FWC_	ENST00000316660.6_1_18:57570359-57570470:+|nuORF	8.822329726475273	0.4071219895973803	6				NaN	NaN	0	NaN	14533	5038	19569
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19574	49.497	NaN	1780.9	30	0	113.18	0.106	+			6698	AYVHMVTHF	9	60	552.7687117283008	NaN	0	552.7687377929688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_AYVHMVTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	76.84663266511073	0.08218905260741291	6				NaN	NaN	0	NaN	14534	5038	19569
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19575	49.499	NaN	1469.1	30	0	85.136	0.038			+	-1	KYCSHCCIDA	10	62	628.7437744140625	NaN	0	628.7437744140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Carbamidomethyl (C)	_KYC(Carbamidomethyl (C))SHC(Carbamidomethyl (C))CIDA_	REV__LY6G6C|p.R21C|1|0.39|ENSG00000204421|chr6:31720195-31720195|G/A|missense_variant	21.9598887501803	0.4201028297492154	6				NaN	NaN	0	NaN	14535	5038	19569
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19579	49.513	NaN	1926.1	30	0	261.64	0.214			+	-1	PCCDSEME	8	56	493.64811146111964	985.2816699890393	2	494.1510009765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),Oxidation (M)	_PCC(Carbamidomethyl (C))DSEM(Oxidation (M))E_	REV__ENSG00000027644|ENST00000368195|INSRR;REV__INSRR|p.L920Cfs*37|2|0.34|ENSG00000027644|chr1:156844261-156844261|C/-|frameshift_variant;REV__INSRR|p.P883Lfs*74|1|0.27|ENSG00000027644|chr1:156844551-156844551|G/-|frameshift_variant	8.822329726475273	0.7821568878176242	6				NaN	NaN	0	NaN	14536	5041	19578
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19580	49.517	NaN	2020.5	30	0	199.64	0.106				-1	 	0	59	527.1110297329614	NaN	0	527.111328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14537	5041	19578
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19581	49.518	NaN	630.82	30	0	73.096	0.106				-1	 	0	34	326.10659827015786	325.09932180355787	1	327.1087951660156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14538	5041	19578
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19582	49.52	NaN	1203.1	30	0	86.762	0.034			+	-1	DETCCVCH	8	49	483.6624590621573	NaN	0	483.66253662109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_DETCCVC(Carbamidomethyl (C))H_	REV__ENSG00000128731|ENST00000261609|HERC2	21.70233525837049	1.7418937515398478	6				NaN	NaN	0	NaN	14539	5041	19578
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19588	49.536	NaN	1457.3	30	0	398.08	0.142				-1	 	0	44	475.17640695954447	474.1691304929445	1	476.17987060546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14542	5044	19587
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19595	49.555	NaN	2084	30	0	176.81	0.214			+	29052	NTFNYTLVL	9	65	542.787798033417	NaN	0	542.7880249023438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NTFNYTLVL_	REV__TSLP|p.D30N|2|0.27|ENSG00000145777|chr5:111071978-111071978|G/A|missense_variant	35.15202426646627	0.3000918603816441	6				NaN	NaN	0	NaN	14546	5047	19594
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19596	49.558	NaN	2369.4	30	0	315.52	0.106			+	-1	FSCMCTMMST	10	62	652.2114640454075	NaN	0	652.2118530273438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C),3 Oxidation (M)	_FSC(Carbamidomethyl (C))M(Oxidation (M))C(Carbamidomethyl (C))TM(Oxidation (M))M(Oxidation (M))ST_	REV__ENST00000444316.2_2_4:102946510-102946588:+|nuORF	10.865556482863946	0.4201028297492154	6				NaN	NaN	0	NaN	14547	5047	19594
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19597	49.56	NaN	1933.5	30	0	225.13	0.043			+	-1	DEDCMCSC	8	56	510.135626081099	NaN	0	510.13458251953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_DEDC(Carbamidomethyl (C))MCSC(Carbamidomethyl (C))_	REV__ENSG00000172538|ENST00000311787|FAM170B	8.822329726475273	1.7418937515398478	6				NaN	NaN	0	NaN	14548	5047	19594
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19603	49.575	NaN	3202.7	30	0	937.55	0.215				-1	 	0	59	475.17640695954447	474.1691304929445	1	475.18121337890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14551	5050	19602
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19604	49.579	NaN	2094.3	30	0	875.74	0.106				-1	 	0	44	392.74747275765935	783.4803925821187	2	392.74871826171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14552	5050	19602
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19605	49.581	NaN	1119.6	30	0	103.76	0.037			+	33583	RLLLAAKPVL	10	47	365.25329163445946	NaN	0	365.2531433105469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RLLLAAKPVL_	REV__ENSG00000158062|ENST00000374222|UBXN11;REV__nc|ENSG00000158062|Q5T124-2|UBXN11;REV__nc|ENSG00000158062|Q5T124-3|UBXN11;REV__nc|ENSG00000158062|Q5T124-4|UBXN11;REV__nc|ENSG00000158062|Q5T124-5|UBXN11;REV__nc|ENSG00000158062|Q5T124-8|UBXN11	12.811709888998246	0.42010282974921537	6				NaN	NaN	0	NaN	14553	5050	19602
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19609	49.595	NaN	4420.1	30	0	283.54	0.214			+	16669	HIKMIIMR	8	63	521.3068155011185	1040.599078069037	2	521.3084106445312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_HIKMIIMR_	REV__ENST00000178638.7_1_15:63615668-63615971:-|nuORF	47.91560031466742	0.6071945918984287	6				NaN	NaN	0	NaN	14554	5053	19608
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19610	49.598	NaN	2382.6	30	0	653.85	0.106				-1	 	0	61	562.1038305399308	NaN	0	562.102783203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14555	5053	19608
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19611	49.6	NaN	1474.3	30	0	152.85	0.106			+	-1	FPDMCCNFNM	10	56	676.2322679487662	NaN	0	676.23193359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C),Oxidation (M)	_FPDMC(Carbamidomethyl (C))C(Carbamidomethyl (C))NFNM(Oxidation (M))_	REV__ENSG00000169508|ENST00000376414|GPR183	10.265252068803164	0.42010282974921537	6				NaN	NaN	0	NaN	14556	5053	19608
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19612	49.602	NaN	1703.1	30	0	236.4	0.039			+	-1	CSKGCMGMCCK	11	57	640.7232219401811	NaN	0	640.7245483398438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C),Oxidation (M)	_C(Carbamidomethyl (C))SKGCM(Oxidation (M))GMC(Carbamidomethyl (C))CK_	REV__ENSG00000124107|ENST00000338380|SLPI	17.468008924990375	0.456735970842152	6				NaN	NaN	0	NaN	14557	5053	19608
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19617	49.617	NaN	2449.5	30	0	227.84	0.214				-1	MVKKNSVVQ	9	57	524.795027041237	NaN	0	524.7952270507812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))VKKNSVVQ_	ENSG00000131379|ENST00000253697|C3orf20;nc|nan|Q8ND61-2|C3orf20	42.396135135203025	0.2590952873412954	6				NaN	NaN	0	NaN	14559	5056	19616
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19618	49.62	NaN	1966.8	30	0	187.25	0.106			+	51305	YSEAWWALG	9	59	541.7507768456338	1081.4870007580676	2	541.7526245117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YSEAWWALG_	REV__TRAF3IP3|p.R14W|1|0.16|ENSG00000009790|chr1:209760079-209760079|C/T|missense_variant	37.15910966729921	0.4535818937225704	6				NaN	NaN	0	NaN	14560	5056	19616
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19619	49.622	NaN	2193.1	30	0	373.65	0.106	+			9823	EPGWRVGSTE	10	65	559.2676711078949	1116.5207892825897	2	559.2695922851562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EPGWRVGSTE_	ENST00000412495.5_1_20:61143906-61144038:-|nuORF	39.252832667884924	0.5560298534376815	6				NaN	NaN	0	NaN	14561	5056	19616
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19620	49.624	NaN	1234.2	30	0	80.649	0.106	+			51274	YRPFLDAS	8	56	484.744873046875	NaN	0	484.744873046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YRPFLDAS_	ENSG00000086848|ENST00000616540|ALG9;nc|ENSG00000086848|Q9H6U8-2|ALG9;nc|ENSG00000086848|Q9H6U8-4|ALG9;nc|ENSG00000086848|Q9H6U8|ALG9	33.51558372728122	1.7418937515398478	6				NaN	NaN	0	NaN	14562	5056	19616
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19621	49.626	NaN	902.8	30	0	81.798	0.106				-1	 	0	43	448.0470736393214	NaN	0	448.04693603515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14563	5056	19616
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19622	49.627	NaN	1525.6	30	0	75.686	0.106			+	-1	CCCCCCEMFAR	11	68	693.206787109375	NaN	0	693.206787109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))C(Carbamidomethyl (C))CCCCEMFAR_	REV__ENSG00000170775|ENST00000303921|GPR37	10.265252068803164	0.456735970842152	6				NaN	NaN	0	NaN	14564	5056	19616
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19623	49.629	NaN	1096.9	30	0	67.961	0.038				-1	 	0	52	617.6190795898438	NaN	0	617.6190795898438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14565	5056	19616
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19629	49.645	NaN	2415.5	30	0	1491.9	0.14				-1	 	0	40	401.26051773491287	800.5064825366258	2	401.26202392578125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14568	5059	19628
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19633	49.661	NaN	7043.7	30	0	333.93	0.214	+			51579	YYLFLGLI	8	84	501.2890643353863	1000.5635757375726	2	501.29034423828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YYLFLGLI_	tr|U7T535|U7T535_FUSNUUncharacterizedproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00420PE=4SV=1	19.359975847455235	0.7988239741663654	6				NaN	NaN	0	NaN	14569	5062	19632
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19634	49.665	NaN	2539.9	30	0	207.77	0.106	+			50140	WIRCLLKN	8	72	523.3021977861471	1044.589842639094	2	523.3035888671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WIRCLLKN_	ENST00000449570.6_1_3:9798246-9807816:+|nuORF	25.450171626174864	0.7628259754767981	6				NaN	NaN	0	NaN	14570	5062	19632
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19635	49.667	NaN	1480.2	30	0	115.11	0.106	+			33241	RGAGGRRR	8	55	443.2656632785533	884.5167736239066	2	443.2668762207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_RGAGGRRR_	ENSG00000178919|ENST00000375123|FOXE1;ENST00000609111.1_1_10:88727834-88728308:-|nuORF	19.359975847455235	0.7988239741663654	6				NaN	NaN	0	NaN	14571	5062	19632
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19636	49.669	NaN	1668.8	30	0	147.14	0.036				-1	RRRRMMMMIQR	11	53	527.6119733902328	NaN	0	527.6110229492188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Oxidation (M)	_RRRRMM(Oxidation (M))MMIQR_	CHD4|p.K73Rfs*129|1|0.13|ENSG00000111642|chr12:6602380-6602380|T/-|frameshift_variant	14.086013023434994	0.456735970842152	6				NaN	NaN	0	NaN	14572	5062	19632
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19642	49.685	NaN	3605.1	30	0	734.28	0.144			+	14420	GTAPLVILSH	10	55	336.5344378546052	NaN	0	336.5341491699219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTAPLVILSH_	REV__ENST00000444374.1_1_9:92316696-92316852:+|nuORF	27.882242232435846	0.4086243523356342	6				NaN	NaN	0	NaN	14575	5065	19641
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19646	49.701	NaN	66565	30	0	57565	0.214				-1	 	0	55	467.19174893749846	932.3689449417969	2	467.1929931640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14576	5068	19645
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19647	49.704	NaN	2994.3	30	0	264.84	0.036				-1	 	0	67	536.304370824152	1070.5941887151039	2	536.3060913085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14577	5068	19645
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19651	49.719	NaN	2732	30	0	1467.1	0.214	+			7954	DSNTANHN	8	43	436.67824513650373	871.3419373398075	2	436.6795654296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DSNTANHN_	CACNA1F|p.G604Afs*3|1|0.21|ENSG00000102001|chrX:49224860-49224860|C/-|frameshift_variant;ENSG00000102001|ENST00000323022|CACNA1F;nc|ENSG00000102001|O60840-4|CACNA1F;nc|ENSG00000102001|O60840-5|CACNA1F;nc|ENSG00000102001|O60840-6|CACNA1F;nc|ENSG00000102001|O60840-7|CACNA1F;nc|ENSG00000102001|O60840|CACNA1F	15.641811463095205	0.7929430624199021	6				NaN	NaN	0	NaN	14578	5071	19650
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19652	49.722	NaN	1579.3	30	0	183.72	0.106			+	-1	DGEMCHEC	8	51	490.6482671244985	979.281981315797	2	490.6493225097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_DGEMCHEC(Carbamidomethyl (C))_	REV__CD164L2|p.V64M|1|0.51|ENSG00000174950|chr1:27382566-27382566|C/T|missense_variant	8.231297230196988	0.7812220690224883	6				NaN	NaN	0	NaN	14579	5071	19650
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19653	49.724	NaN	2115.9	30	0	220.18	0.106			+	-1	NSDICARWV	9	66	560.7633944132019	1119.5122358932038	2	560.767333984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_NSDIC(Carbamidomethyl (C))ARWV_	REV__ENSG00000134900|ENST00000376052|TPP2;REV__nc|ENSG00000134900|P29144|TPP2;REV__TPP2|p.F663Lfs*13|1|0.13|ENSG00000134900|chr13:102640342-102640342|T/-|frameshift_variant;REV__TPP2|p.F722Lfs*12|1|0.06|ENSG00000134900|chr13:102643366-102643367|-/AAACTTA|frameshift_variant	35.61828744233558	0.47037581924408073	6				NaN	NaN	0	NaN	14580	5071	19650
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19654	49.726	NaN	2313.8	30	0	514.05	0.039				-1	CCAHNTCVCHM	11	62	639.7179674048781	1277.421381876556	2	640.2242431640625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_CCAHNTC(Carbamidomethyl (C))VCHM_	ENST00000343307.4_1_13:31903868-31903919:+|nuORF	18.262085536374414	0.7849791996189919	6				NaN	NaN	0	NaN	14581	5071	19650
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19659	49.74	NaN	32502	30	0	23428	0.214				-1	 	0	69	459.20262745109153	916.3907019689831	2	459.2040710449219	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14583	5074	19658
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19660	49.744	NaN	3356.6	30	0	795.94	0.106				-1	KLGKQAQGCK	10	57	373.20987774270935	NaN	0	373.2096862792969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_KLGKQAQGC(Carbamidomethyl (C))K_	ENSG00000135476|ENST00000257934|ESPL1;ESPL1|p.Q1311Rfs*21|1|0.46|ENSG00000135476|chr12:53286668-53286669|AG/-|frameshift_variant;nc|ENSG00000135476|Q14674-2|ESPL1	27.047317107675042	0.41136583337917604	6				NaN	NaN	0	NaN	14584	5074	19658
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19661	49.746	NaN	1642.1	30	0	143.81	0.032				-1	 	0	57	404.2315655343876	806.4485781355752	2	404.2327575683594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14585	5074	19658
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19667	49.762	NaN	8114.4	30	0	3969.2	0.214			+	29013	NSPPECED	8	49	445.6630326014468	889.3115122696936	2	445.666259765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_NSPPECED_	REV__ENSG00000072840|ENST00000264956|EVC;REV__EVC|p.V948Cfs*22|1|0.07|ENSG00000072840|chr4:5810394-5810394|G/-|frameshift_variant	25.450171626174864	0.7628259754767981	6				NaN	NaN	0	NaN	14588	5077	19666
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19668	49.766	NaN	8147.3	30	0	2317.5	0.106			+	-1	MRSSTSSS	8	50	429.68444298698415	857.3543330407683	2	429.6859130859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_M(Oxidation (M))RSSTSSS_	REV__ENST00000594152.5_2_1:71557353-71702913:+|nuORF	21.9598887501803	0.7897753010812679	6				NaN	NaN	0	NaN	14589	5077	19666
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19669	49.768	NaN	2022.9	30	0	676.86	0.106				-1	 	0	48	412.7449057356904	823.4752585381808	2	412.7458190917969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14590	5077	19666
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19670	49.769	NaN	4402.2	30	0	487.72	0.037	+			7908	DSDGDKSDDNL	11	68	590.7334191525405	1179.4522853718809	2	590.7352905273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_DSDGDKSDDNL_	ENSG00000196781|ENST00000376499|TLE1	22.579656572578934	0.7529490144093228	6				NaN	NaN	0	NaN	14591	5077	19666
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19675	49.784	NaN	2907.6	30	0	892.02	0.214				-1	 	0	51	362.64744414348513	723.2803353537703	2	362.6487121582031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14593	5080	19674
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19676	49.788	NaN	3011.9	30	0	366.62	0.106				-1	MCITSMAFMC	10	53	597.727747907956	1193.4409428827119	2	597.7300415039062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_MCITSMAFMC(Carbamidomethyl (C))_	ENST00000346178.8_1_11:62397131-62397335:-|nuORF	15.641811463095205	0.7369665665077569	6				NaN	NaN	0	NaN	14594	5080	19674
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19677	49.79	NaN	4180.4	30	0	867.09	0.106			+	51306	YSELDSVGHS	10	61	547.2453903331277	1092.4762277330553	2	547.2490234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_YSELDSVGHS_	REV__ENSG00000111913|ENST00000643898|RIPOR2;REV__nc|ENSG00000111913|Q9Y4F9|RIPOR2	44.116797842482775	0.5112108506279902	6				NaN	NaN	0	NaN	14595	5080	19674
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19678	49.791	NaN	3684.3	30	0	687.12	0.106	+			6820	CHHGTDFCCAQ	11	58	611.2156813882497	1220.4168098432992	2	611.2181396484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_CHHGTDFCCAQ_	ENST00000530831.1_1_11:71208417-71209628:+|nuORF	14.137123925751023	0.8042936413770803	6				NaN	NaN	0	NaN	14596	5080	19674
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19679	49.793	NaN	3034.4	30	0	487.79	0.106				-1	MCMIMMEMT	9	59	605.210527671212	1208.406502409224	2	605.2118530273438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C),2 Oxidation (M)	_MC(Carbamidomethyl (C))MIM(Oxidation (M))M(Oxidation (M))EMT_	CTNNA1|p.T832*|1|0.29|ENSG00000044115|chr5:138933859-138933862|CAGA/-|frameshift_variant;CTNNA3|p.K856Nfs*3|1|0.09|ENSG00000183230|chr10:65920450-65920450|T/-|frameshift_variant;CTNNA3|p.N707S|1|0.07|ENSG00000183230|chr10:66069347-66069347|T/C|missense_variant;CTNNA3|p.P857Tfs*4|2|0.35|ENSG00000183230|chr10:65920449-65920450|-/T|frameshift_variant;ENSG00000044115|ENST00000302763|CTNNA1;ENSG00000066032|ENST00000402739|CTNNA2;ENSG00000183230|ENST00000433211|CTNNA3;ENST00000373735.1_1_10:67680090-67838726:-|nuORF;ENST00000467892.1_1_2:80816479-80835548:+|nuORF;nc|ENSG00000044115|P35221-2|CTNNA1;nc|ENSG00000044115|P35221-3|CTNNA1;nc|ENSG00000066032|P26232-2|CTNNA2;nc|ENSG00000066032|P26232-3|CTNNA2;nc|ENSG00000066032|P26232-4|CTNNA2;nc|ENSG00000066032|P26232-5|CTNNA2;nc|ENSG00000066032|P26232-6|CTNNA2	31.954861631926434	0.5046124803899898	6				NaN	NaN	0	NaN	14597	5080	19674
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19680	49.795	NaN	1904.2	30	0	225.31	0.106	+			44982	TVCQCKEGTF	10	55	558.2476665460711	NaN	0	558.2474975585938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TVCQCKEGTF_	ENSG00000173535|ENST00000356864|TNFRSF10C	29.170058357718403	0.40439580130713204	6				NaN	NaN	0	NaN	14598	5080	19674
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19681	49.797	NaN	3052.1	30	0	292.62	0.038				-1	MDTVDIMLFV	10	72	600.2884169988437	1198.5622810644873	2	600.2920532226562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Oxidation (M)	_M(Oxidation (M))DTVDIMLFV_	tr|U7SZI1|U7SZI1_FUSNUYfcCfamilyproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00762PE=4SV=1	37.15910966729921	0.575322462179216	6				NaN	NaN	0	NaN	14599	5080	19674
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19688	49.815	NaN	4483	30	0	3309.5	0.214				-1	 	0	35	318.12201081842323	634.2294687036465	2	318.1229248046875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14603	5083	19687
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19689	49.819	NaN	3908.1	30	0	2490.8	0.106				-1	 	0	39	310.13241982697946	618.2502867207589	2	310.13360595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14604	5083	19687
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19690	49.82	NaN	6648.5	30	0	1279.2	0.106			+	-1	GGPSCPCSFCL	11	61	564.2200379035858	1126.4255228739714	2	565.2229614257812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_GGPSC(Carbamidomethyl (C))PCSFCL_	REV__ENST00000377403.6_1_1:9328830-9329223:+|nuORF	26.69291269510374	0.70980431218767	6				NaN	NaN	0	NaN	14605	5083	19687
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19691	49.822	NaN	4268.4	30	0	514.21	0.106				-1	LCCCMPCS	8	58	495.1538477467165	988.293142560233	2	495.1564025878906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C),Oxidation (M)	_LCC(Carbamidomethyl (C))C(Carbamidomethyl (C))M(Oxidation (M))PCS_	ENST00000368178.3_1_1:157718396-157736689:-|nuORF;ENST00000368181.4_1_1:157716536-157736689:-|nuORF	16.704963439144045	0.7946246187734944	6				NaN	NaN	0	NaN	14606	5083	19687
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19692	49.824	NaN	3994.3	30	0	705.29	0.106				-1	FCCFMGCD	8	56	491.65034028141827	981.2861276296366	2	491.6514587402344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_FCC(Carbamidomethyl (C))FMGCD_	ENSG00000089486|ENST00000567695|CDIP1;nc|ENSG00000089486|Q9H305-2|CDIP1;nc|ENSG00000089486|Q9H305-3|CDIP1	15.63621529709179	0.7929342111279789	6				NaN	NaN	0	NaN	14607	5083	19687
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19693	49.826	NaN	3782.9	30	0	557.77	0.106			+	9027	EGEEASYD	8	51	450.1676879772551	898.3208230213103	2	450.67254638671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_EGEEASYD_	REV__ENSG00000143889|ENST00000449105|HNRNPLL;REV__nc|ENSG00000143889|Q8WVV9-2|HNRNPLL;REV__nc|ENSG00000143889|Q8WVV9-3|HNRNPLL;REV__nc|ENSG00000143889|Q8WVV9-4|HNRNPLL;REV__nc|ENSG00000143889|Q8WVV9-5|HNRNPLL	18.324413293986947	0.7971860551947066	6				NaN	NaN	0	NaN	14608	5083	19687
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19694	49.828	NaN	4319.6	30	0	341.51	0.039			+	-1	SECCSPCCSSS	11	67	660.7037230605239	NaN	0	660.7030639648438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	4 Carbamidomethyl (C)	_SEC(Carbamidomethyl (C))C(Carbamidomethyl (C))SPC(Carbamidomethyl (C))C(Carbamidomethyl (C))SSS_	REV__ENSG00000213416|ENST00000394014|KRTAP4-12;REV__ENSG00000241241|ENST00000440582|KRTAP4-16	9.182911543092327	0.456735970842152	6				NaN	NaN	0	NaN	14609	5083	19687
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19698	49.842	NaN	6832.4	30	0	1782.7	0.215				-1	HCQMSSKMS	9	50	564.2200379035858	1126.4255228739714	2	564.7236938476562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C),2 Oxidation (M)	_HC(Carbamidomethyl (C))QM(Oxidation (M))SSKM(Oxidation (M))S_	CENPF|p.S2957Afs*6|1|0.52|ENSG00000117724|chr1:214657310-214657310|A/-|frameshift_variant;CENPF|p.T1974Pfs*11|1|0.22|ENSG00000117724|chr1:214645483-214645483|A/-|frameshift_variant;CENPF|p.T2189Hfs*3|1|0.28|ENSG00000117724|chr1:214646131-214646131|A/-|frameshift_variant;ENSG00000117724|ENST00000366955|CENPF	30.503639358989545	0.5181749237905803	6				NaN	NaN	0	NaN	14610	5086	19697
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19699	49.845	NaN	3286.6	30	0	310.19	0.106			+	50784	YENEKCPTC	9	61	600.7365469497729	1199.4585409663457	2	600.73779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C)	_YENEKC(Carbamidomethyl (C))PTC(Carbamidomethyl (C))_	REV__ENSG00000168959|ENST00000305447|GRM5;REV__GRM5|p.Q927Sfs*99|1|0.32|ENSG00000168959|chr11:88509453-88509453|C/-|frameshift_variant;REV__nc|ENSG00000168959|P41594-2|GRM5;REV__nc|ENSG00000168959|P41594-3|GRM5	41.42661286455405	0.403525789677298	6				NaN	NaN	0	NaN	14611	5086	19697
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19700	49.847	NaN	2392.3	30	0	548.78	0.106				-1	CSGHCSACRV	10	56	568.7233716645562	1135.4321903959124	2	568.7249755859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))SGHC(Carbamidomethyl (C))SACRV_	ZDHHC24|p.R106C|1|0.35|ENSG00000174165|chr11:66543947-66543947|G/A|missense_variant	20.94693142431847	0.7087701759873708	6				NaN	NaN	0	NaN	14612	5086	19697
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19701	49.849	NaN	2256.1	30	0	255.65	0.106			+	11474	FNRWWWRYDEA	11	73	814.8760986328125	NaN	0	814.8760986328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FNRWWWRYDEA_	REV__ENSG00000101337|ENST00000398022|TM9SF4	5.220141733780809	0.456735970842152	6				NaN	NaN	0	NaN	14613	5086	19697
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19702	49.851	NaN	1479.7	30	0	127.58	0.106				-1	VERCGRKSL	9	41	368.86962069100764	NaN	0	368.8693542480469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Carbamidomethyl (C)	_VERC(Carbamidomethyl (C))GRKSL_	ENST00000428202.6_2_5:74986259-74986298:-|nuORF	22.579656572578934	0.3605601358598771	6				NaN	NaN	0	NaN	14614	5086	19697
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19703	49.853	NaN	2882.8	30	0	342.94	0.106			+	-1	FFIQFCRFFMC	11	71	822.8643134970695	1643.7140740609389	2	823.3660278320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Acetyl (Protein N-term),2 Carbamidomethyl (C)	_(Acetyl (Protein N-term))FFIQFC(Carbamidomethyl (C))RFFMC(Carbamidomethyl (C))_	REV__ENST00000337179.9_1_12:93793193-93793316:+|nuORF	5.55782384252955	0.84446477687463	6				NaN	NaN	0	NaN	14615	5086	19697
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19704	49.855	NaN	2466.2	30	0	277.96	0.039				-1	SEDSCLCCCC	10	64	647.1912870958653	NaN	0	647.1928100585938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	4 Carbamidomethyl (C)	_SEDSC(Carbamidomethyl (C))LC(Carbamidomethyl (C))CC(Carbamidomethyl (C))C(Carbamidomethyl (C))_	CD2AP-MDFI|1|fusion;ENSG00000112559|ENST00000230321|MDFI	10.865556482863946	0.4201028297492154	6				NaN	NaN	0	NaN	14616	5086	19697
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19708	49.869	NaN	1422	30	0	75.874	0.214	+			9264	EGYTCDCFEG	10	52	375.12835758335393	NaN	0	375.12835693359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EGYTCDCFEG_	ENSG00000119681|ENST00000261978|LTBP2	16.71738777980365	0.4201028297492154	6				NaN	NaN	0	NaN	14617	5089	19707
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19709	49.872	NaN	1695.4	30	0	292.81	0.106				-1	 	0	47	507.6335348124586	1013.2525166917172	2	507.6355285644531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14618	5089	19707
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19710	49.874	NaN	1790.3	30	0	225.42	0.106				-1	ACQACCML	8	49	450.1676879772551	898.3208230213103	2	450.6725769042969	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_ACQACC(Carbamidomethyl (C))ML_	ENSG00000277399|ENST00000616987|GPR179;GPR179|p.K1289Rfs*12|1|0.29|ENSG00000277399|chr17:38329703-38329703|T/-|frameshift_variant;GPR179|p.L1200Afs*38|1|0.36|ENSG00000277399|chr17:38329971-38329972|-/C|frameshift_variant;GPR179|p.R1290Efs*59|1|0.25|ENSG00000277399|chr17:38329702-38329703|-/T|frameshift_variant;nc|ENSG00000277399|Q6PRD1|GPR179	20.481830146152948	0.8005983782650069	6				NaN	NaN	0	NaN	14619	5089	19707
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19711	49.876	NaN	2140.7	30	0	189.99	0.106			+	11291	FKILPERF	8	55	525.311180234783	1048.607807536366	2	525.3131103515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_FKILPERF_	REV__ENSG00000196367|ENST00000456197|TRRAP;REV__nc|ENSG00000196367|Q9Y4A5-2|TRRAP;REV__nc|ENSG00000196367|Q9Y4A5|TRRAP;REV__TRRAP-ASNS|1|fusion;REV__TRRAP-ASNS|2|fusion;REV__TRRAP|p.A1620Cfs*35|1|0.27|ENSG00000196367|chr7:98949499-98949500|-/G|frameshift_variant;REV__TRRAP|p.K3443Sfs*19|1|0.28|ENSG00000196367|chr7:99004246-99004246|A/-|frameshift_variant	20.94693142431847	0.7975965917238792	6				NaN	NaN	0	NaN	14620	5089	19707
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19712	49.878	NaN	2899.5	30	0	212.15	0.106			+	-1	CCCCCCRPGC	10	65	668.1883024943115	NaN	0	668.1865844726562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	5 Carbamidomethyl (C)	_C(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))CC(Carbamidomethyl (C))RPGC_	REV__ENST00000498308.1_1_7:5111775-5112846:+|nuORF	7.193352174278301	0.4201028297492154	6				NaN	NaN	0	NaN	14621	5089	19707
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19713	49.88	NaN	1010.5	30	0	111.69	0.106			+	35451	SASPRPRRT	9	33	343.19766570240824	NaN	0	343.197998046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_SASPRPRRT_	REV__ENST00000471877.5_1_7:149575832-149576763:+|nuORF	13.45404412870281	0.3914458912562635	6				NaN	NaN	0	NaN	14622	5089	19707
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19714	49.881	NaN	1866.6	30	0	184.28	0.039			+	-1	AMCSYLSCCCC	11	54	630.1898586514135	NaN	0	630.1915893554688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Carbamidomethyl (C),Oxidation (M)	_AM(Oxidation (M))CSYLSC(Carbamidomethyl (C))CCC_	REV__ENST00000409158.5_1_2:131904864-131905029:+|nuORF	9.705651100619752	0.456735970842152	6				NaN	NaN	0	NaN	14623	5089	19707
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19719	49.896	NaN	3978.9	30	0	148.98	0.214			+	49041	VVICIELSTI	10	79	545.3149365314914	NaN	0	545.3114624023438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVICIELSTI_	REV__CMTM1|p.F60Lfs*3|1|0.35|ENSG00000089505|chr16:66570027-66570027|T/-|frameshift_variant;REV__ENSG00000089505|ENST00000379500|CMTM1;REV__nc|ENSG00000089505|Q8IZ96-16|CMTM1;REV__nc|ENSG00000089505|Q8IZ96-2|CMTM1;REV__nc|ENSG00000089505|Q8IZ96-3|CMTM1;REV__nc|ENSG00000089505|Q8IZ96-4|CMTM1;REV__nc|ENSG00000089505|Q8IZ96-9|CMTM1;REV__nc|ENSG00000089505|Q8IZ96|CMTM1	29.14955571784316	0.4044631218331212	6				NaN	NaN	0	NaN	14625	5092	19718
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19720	49.899	NaN	2611.2	30	0	294.97	0.106			+	29241	NWIHRTKK	8	64	541.8144159173397	1081.6142789014793	2	541.816162109375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_NWIHRTKK_	REV__SAMD3|p.L362Wfs*9|1|0.5|ENSG00000164483|chr6:130146120-130146120|A/-|frameshift_variant	42.396135135203025	0.6414440140393314	6				NaN	NaN	0	NaN	14626	5092	19718
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19721	49.901	NaN	1864.2	30	0	309.55	0.106				-1	 	0	57	554.1330613327145	NaN	0	554.1327514648438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14627	5092	19718
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19722	49.903	NaN	1959.1	30	0	158.92	0.106				-1	SCCPSCCESSC	11	57	668.6892601287855	NaN	0	668.6876220703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	4 Carbamidomethyl (C)	_SC(Carbamidomethyl (C))CPSC(Carbamidomethyl (C))C(Carbamidomethyl (C))ESSC(Carbamidomethyl (C))_	ENSG00000213416|ENST00000394014|KRTAP4-12;ENSG00000241241|ENST00000440582|KRTAP4-16	5.55782384252955	0.456735970842152	6				NaN	NaN	0	NaN	14628	5092	19718
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19723	49.905	NaN	1545.6	30	0	236.92	0.106			+	25991	LSKGRQYLT	9	55	533.3069614159107	1064.5993698986213	2	533.8091430664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	Unmodified	_LSKGRQYLT_	REV__ENSG00000122707|ENST00000377966|RECK	30.317721548370564	0.5199124245378496	6				NaN	NaN	0	NaN	14629	5092	19718
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19724	49.907	NaN	2358.8	30	0	180.41	0.106	+			44913	TVAFSFGAPY	10	63	530.2609042810212	NaN	0	530.2603759765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_TVAFSFGAPY_	ENSG00000173557|ENST00000329615|FAM166C	45.9519527083369	0.331194823726099	6				NaN	NaN	0	NaN	14630	5092	19718
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19725	49.909	NaN	1454.6	30	0	372.4	0.034				-1	FWMDECCFM	9	40	453.14959716796875	NaN	0	453.14959716796875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	2 Carbamidomethyl (C),2 Oxidation (M)	_FWM(Oxidation (M))DEC(Carbamidomethyl (C))C(Carbamidomethyl (C))FM(Oxidation (M))_	ENST00000578730.1_1_4:1245335-1281818:+|nuORF;ENST00000581398.1_1_4:1245404-1245611:+|nuORF	9.705651100619752	0.40413237678333463	6				NaN	NaN	0	NaN	14631	5092	19718
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19729	49.923	NaN	4064.3	30	0	2669	0.214				-1	 	0	43	390.73177637807237	779.4489998229448	2	390.7330322265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14632	5095	19728
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19730	49.926	NaN	2559.2	30	0	1323.4	0.106				-1	 	0	51	392.74747275765935	783.4803925821187	2	392.7488098144531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14633	5095	19728
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19731	49.928	NaN	1834.7	30	0	162.69	0.106	+			9338	EILPSLHAK	9	55	504.2974853515625	NaN	0	504.2974853515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_EILPSLHAK_	ENST00000355819.5_1_12:10205351-10215657:+|nuORF	39.252832667884924	0.27938773122138094	6				NaN	NaN	0	NaN	14634	5095	19728
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19732	49.93	NaN	2680.1	30	0	209.05	0.039			+	50642	YEDEDEDDDD	10	60	630.1898586514135	NaN	0	630.1907958984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YEDEDEDDDD_	REV__ENSG00000091009|ENST00000265271|RBM27	6.31265097734313	0.4201028297492154	6				NaN	NaN	0	NaN	14635	5095	19728
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19738	49.946	NaN	3095.2	30	0	696.66	0.214	+			19662	KDLRVKNQY	9	63	582.3305041161884	1162.6464552991768	2	582.3330078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KDLRVKNQY_	EIF5B|p.E912D|1|0.23|ENSG00000158417|chr2:99390693-99390693|A/C|missense_variant	27.882242232435846	0.5426732730940306	6				NaN	NaN	0	NaN	14638	5098	19737
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19739	49.95	NaN	2934.1	30	0	205.94	0.106			+	-1	CGPHCLCMCM	10	74	622.1940510288528	1242.3735491245054	2	621.6970825195312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Carbamidomethyl (C),2 Oxidation (M)	_C(Carbamidomethyl (C))GPHCLCM(Oxidation (M))C(Carbamidomethyl (C))M(Oxidation (M))_	REV__SLC34A1|p.R613Gfs*69|1|0.41|ENSG00000131183|chr5:177398197-177398197|C/-|frameshift_variant	19.359975847455235	0.718073418909716	6				NaN	NaN	0	NaN	14639	5098	19737
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19740	49.952	NaN	2002.3	30	0	512.02	0.034	+			30007	PPKLQKMA	8	59	456.77127735823495	911.5280017832699	2	456.7730407714844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PPKLQKMA_	ENSG00000162989|ENST00000295101|KCNJ3	20.481830146152948	0.8005983782650069	6				NaN	NaN	0	NaN	14640	5098	19737
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19744	49.966	NaN	2007.7	30	0	95.75	0.214			+	-1	IKMKMQNQM	9	70	584.2903640518676	NaN	0	584.2900390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_IKMKMQNQM(Oxidation (M))_	REV__ENST00000484167.5_1_2:242282419-242283206:+|nuORF	38.80614096846853	0.28164298475537564	6				NaN	NaN	0	NaN	14641	5101	19743
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19745	49.969	NaN	2665.2	30	0	280.35	0.106	+			16073	HCDEENMGEHC	11	76	652.2108589121395	NaN	0	652.2111206054688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_HCDEENMGEHC_	ENSG00000130528|ENST00000252825|HRC	12.206681093483082	0.456735970842152	6				NaN	NaN	0	NaN	14642	5101	19743
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19746	49.971	NaN	1651.3	30	0	136.83	0.106			+	10840	FASLQSPAVE	10	63	524.7687635536067	NaN	0	524.7681884765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_FASLQSPAVE_	REV__ENSG00000174990|ENST00000649794|CA5A;REV__ENST00000568175.1_3_16:29630108-29634155:-|nuORF	36.446750945000026	0.3805027428805705	6				NaN	NaN	0	NaN	14643	5101	19743
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19747	49.973	NaN	2678.9	30	0	315.73	0.106				-1	CLCCCLQVE	9	59	564.2200379035858	1126.4255228739714	2	564.2240600585938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))LCC(Carbamidomethyl (C))CLQVE_	ENST00000524227.5_1_8:41518986-41519133:-|nuORF;nc|ENSG00000029534|P16157-14|ANK1;nc|ENSG00000029534|P16157-15|ANK1	24.20275056022122	0.577060078256802	6				NaN	NaN	0	NaN	14644	5101	19743
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19748	49.975	NaN	2311.3	30	0	98.39	0.106			+	-1	FDCDCNMCMM	10	67	663.6913346876518	NaN	0	663.6936645507812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	5	2 Carbamidomethyl (C)	_FDCDC(Carbamidomethyl (C))NMC(Carbamidomethyl (C))MM_	REV__FGD5|p.G1252D|1|0.31|ENSG00000154783|chr3:14922496-14922496|G/A|missense_variant	10.265252068803164	0.42010282974921537	6				NaN	NaN	0	NaN	14645	5101	19743
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19749	49.977	NaN	2075.4	30	0	129.31	0.106	+			24888	LKKYLLDF	8	52	520.31201171875	NaN	0	520.31201171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	6	Unmodified	_LKKYLLDF_	ENST00000546766.5_1_12:98989167-98989365:+|nuORF	25.450171626174864	1.7418937515398478	6				NaN	NaN	0	NaN	14646	5101	19743
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19750	49.979	NaN	1824.5	30	0	180.75	0.036	+			43298	TFRRMWKWLQE	11	63	527.6113330678207	NaN	0	527.6102905273438	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	7	Unmodified	_TFRRMWKWLQE_	ENSG00000119547|ENST00000491143|ONECUT2;ENSG00000169856|ENST00000305901|ONECUT1;ENSG00000205922|ENST00000382349|ONECUT3	11.932372222841853	0.456735970842152	6				NaN	NaN	0	NaN	14647	5101	19743
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19755	49.993	NaN	1435.3	30	0	71.488	0.142			+	-1	CCAPDETE	8	51	483.6624590621573	NaN	0	483.662353515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))C(Carbamidomethyl (C))CAPDETE_	REV__ENSG00000008438|ENST00000008938|PGLYRP1;REV__PGLYRP1|p.A20V|1|0.32|ENSG00000008438|chr19:46022963-46022963|G/A|missense_variant	26.79610172149135	1.7418937515398478	6				NaN	NaN	0	NaN	14649	5104	19754
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19760	50.009	NaN	3052.9	30	0	175.95	0.215				-1	 	0	76	501.2890643353863	1000.5635757375726	2	501.2904052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14651	5107	19759
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19761	50.013	NaN	1840.4	30	0	193.48	0.034	+			33306	RGRGGAALSL	10	60	479.2829070827327	NaN	0	479.2799987792969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_RGRGGAALSL_	nc|ENSG00000203618|P13224-2|GP1BB	40.77816245573522	0.36390427802201647	6				NaN	NaN	0	NaN	14652	5107	19759
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19769	50.031	NaN	4125.5	30	0	901.14	0.214				-1	KPPLAQKPS	9	42	336.5344378546052	NaN	0	336.53436279296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))KPPLAQKPS_	ENSG00000130787|ENST00000253083|HIP1R;ENST00000538236.1_1_12:123345767-123346160:+|nuORF;HIP1R|p.A1047T|1|0.1|ENSG00000130787|chr12:122861494-122861494|G/A|missense_variant	17.364965105453717	0.37820932774828947	6				NaN	NaN	0	NaN	14657	5110	19768
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19770	50.035	NaN	2854.2	30	0	209.62	0.106	+			17975	IHATLLEYG	9	62	508.77381721721525	NaN	0	508.7740783691406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IHATLLEYG_	ENSG00000125633|ENST00000376300|CCDC93;ENST00000460781.1_1_2:118709253-118753033:-|nuORF	73.97473282117947	0.09202988758641674	6				NaN	NaN	0	NaN	14658	5110	19768
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19771	50.037	NaN	3359.2	30	0	373.25	0.106			+	-1	CCCLCCCFYC	10	74	667.6853637695312	NaN	0	667.6853637695312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	3 Carbamidomethyl (C)	_C(Carbamidomethyl (C))CCLCC(Carbamidomethyl (C))CFYC(Carbamidomethyl (C))_	REV__ENSG00000147570|ENST00000276570|DNAJC5B	7.690282842768113	0.42010282974921537	6				NaN	NaN	0	NaN	14659	5110	19768
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19772	50.039	NaN	3838.1	30	0	313.94	0.039			+	-1	CMNADDMFEF	10	76	640.2222290039062	NaN	0	640.2222290039062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_C(Carbamidomethyl (C))MNADDMFEF_	REV__ENSG00000104341|ENST00000521545|LAPTM4B;REV__nc|ENSG00000104341|Q86VI4|LAPTM4B	14.864876125193954	0.4201028297492154	6				NaN	NaN	0	NaN	14660	5110	19768
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19777	50.053	NaN	25651	30	0	21741	0.214				-1	 	0	54	467.19174893749846	932.3689449417969	2	467.1929016113281	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14662	5113	19776
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19778	50.057	NaN	4789.8	30	0	3077.6	0.106				-1	SSVMGTQM	8	49	436.67824513650373	871.3419373398075	2	436.67962646484375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Oxidation (M)	_SSVM(Oxidation (M))GTQM(Oxidation (M))_	ENSG00000136021|ENST00000360820|SCYL2	14.664097394203935	0.7913966407026132	6				NaN	NaN	0	NaN	14663	5113	19776
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19779	50.059	NaN	1749.3	30	0	184.32	0.036	+			6699	AYVHMVTHF	9	63	552.7687117283008	NaN	0	552.769287109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_AYVHMVTHF_	ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6	47.91560031466742	0.22105767942158736	6				NaN	NaN	0	NaN	14664	5113	19776
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19788	50.09	NaN	13150	30	0	9390.9	0.214				-1	 	0	67	459.20262745109153	916.3907019689831	2	459.2040100097656	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14667	5119	19787
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19789	50.093	NaN	2737.2	30	0	577.3	0.037			+	36891	SIGVTAPT	8	43	373.20987774270935	NaN	0	373.2098693847656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SIGVTAPT_	REV__ENST00000230056.7_1_6:24775218-24775341:+|nuORF;REV__ENST00000468943.1_1_6:24775218-24777534:+|nuORF	25.450171626174864	1.7418937515398478	6				NaN	NaN	0	NaN	14668	5119	19787
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19793	50.107	NaN	1801.9	30	0	118.77	0.214				-1	 	0	63	590.7334191525405	1179.4522853718809	2	590.7349853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14669	5122	19792
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19794	50.111	NaN	1514.7	30	0	95.308	0.106			+	21556	KNWCLRLL	8	62	523.3024332440201	1044.5903135548401	2	523.3032836914062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KNWCLRLL_	REV__ENSG00000136485|ENST00000614556|DCAF7	33.51558372728122	0.7005509609380386	6				NaN	NaN	0	NaN	14670	5122	19792
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19795	50.113	NaN	1632	30	0	166.55	0.035	+			24725	LHPHVLMGL	9	58	508.7905736317834	1015.5665943303668	2	508.792236328125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LHPHVLMGL_	ENST00000405709.6_1_7:110303289-110303394:-|nuORF	29.841539824830324	0.5243625958137083	6				NaN	NaN	0	NaN	14671	5122	19792
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19801	50.129	NaN	3106.8	30	0	101.99	0.214	+			9274	EHHGKKLQI	9	74	545.3149365314914	NaN	0	545.3170166015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EHHGKKLQI_	ENSG00000132274|ENST00000379965|TRIM22;ENST00000460454.1_1_11:5717462-5717939:+|nuORF;nc|ENSG00000132274|Q8IYM9-2|TRIM22;TRIM22|p.S376Tfs*3|1|0.09|ENSG00000132274|chr11:5709277-5709278|-/CATG|frameshift_variant	27.882242232435846	0.3367954786602879	6				NaN	NaN	0	NaN	14674	5125	19800
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19802	50.133	NaN	2322.2	30	0	299.83	0.037	+			51120	YMRRFRSQ	8	65	572.2955751761035	1142.576597419007	2	572.2962036132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YMRRFRSQ_	ENSG00000197555|ENST00000381232|SIPA1L1;nc|ENSG00000197555|O43166-3|SIPA1L1;nc|ENSG00000197555|O43166|SIPA1L1;SIPA1L1|p.K776*|1|0.32|ENSG00000197555|chr14:71671184-71671185|-/C|frameshift_variant;SIPA1L1|p.N727Kfs*21|1|0.7|ENSG00000197555|chr14:71661386-71661387|-/A|frameshift_variant;SIPA1L1|p.R58Efs*8|1|0.35|ENSG00000197555|chr14:71588038-71588038|C/-|frameshift_variant;SIPA1L1|p.R58Kfs*2|1|0.38|ENSG00000197555|chr14:71588038-71588039|CC/-|frameshift_variant	40.5726180659479	0.6527593143185008	6				NaN	NaN	0	NaN	14675	5125	19800
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19807	50.147	NaN	3429.6	30	0	293.77	0.214			+	38362	SRQNVAHII	9	57	519.2962728475986	1036.5779927619972	2	519.2982788085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SRQNVAHII_	REV__sp|P16785|LTP_HCMVALargetegumentproteindeneddylaseOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL48PE=1SV=1;REV__sp|Q6SW84|LTP_HCMVMLargetegumentproteindeneddylaseOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL48PE=3SV=1	55.50420428727701	0.2510918378945873	6				NaN	NaN	0	NaN	14677	5128	19806
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19808	50.151	NaN	1781	30	0	208.9	0.036			+	5691	AVELPQGQTI	10	61	528.2885269527302	1054.5625009722603	2	528.2883911132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AVELPQGQTI_	REV__ENSG00000130714|ENST00000402686|POMT1;REV__ENST00000462375.5_1_9:134385592-134386855:+|nuORF;REV__ENST00000485278.5_1_9:134386708-134386855:+|nuORF;REV__nc|ENSG00000130714|Q9Y6A1-3|POMT1;REV__nc|ENSG00000130714|Q9Y6A1-4|POMT1;REV__nc|ENSG00000130714|Q9Y6A1|POMT1;REV__POMT1|p.L421*|1|0.41|ENSG00000130714|chr9:131515440-131515440|C/-|frameshift_variant	41.42661286455405	0.5359995577334734	6				NaN	NaN	0	NaN	14678	5128	19806
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19813	50.166	NaN	1849.4	30	0	368.06	0.214			+	-1	GEDDECEE	8	50	491.65034028141827	981.2861276296366	2	491.65203857421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GEDDEC(Carbamidomethyl (C))EE_	REV__ENSG00000151276|ENST00000402939|MAGI1;REV__nc|ENSG00000151276|Q96QZ7-3|MAGI1;REV__nc|ENSG00000151276|Q96QZ7-4|MAGI1;REV__nc|ENSG00000151276|Q96QZ7-5|MAGI1;REV__nc|ENSG00000151276|Q96QZ7-6|MAGI1;REV__nc|ENSG00000151276|Q96QZ7-7|MAGI1;REV__nc|ENSG00000151276|Q96QZ7|MAGI1	8.231297230196988	0.7812220690224883	6				NaN	NaN	0	NaN	14680	5131	19812
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19814	50.169	NaN	2795.2	30	0	243.3	0.106	+			18852	IVCWAPFTTY	10	69	600.7923203596122	NaN	0	600.79150390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_IVCWAPFTTY_	ENSG00000112218|ENST00000229955|GPR63	29.14955571784316	0.4044631218331212	6				NaN	NaN	0	NaN	14681	5131	19812
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19815	50.171	NaN	3367	30	0	2471.7	0.106				-1	 	0	34	318.12201081842323	634.2294687036465	2	318.1223449707031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14682	5131	19812
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19816	50.173	NaN	2052.5	30	0	439.6	0.033	+			50586	YDCMACGK	8	50	445.6657409667969	NaN	0	445.6657409667969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Unmodified	_YDCMACGK_	ENSG00000251369|ENST00000699333|ZNF550;nc|ENSG00000251369|Q7Z398-2|ZNF550	18.324413293986947	1.7418937515398478	6				NaN	NaN	0	NaN	14683	5131	19812
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19825	50.194	NaN	1063.5	30	0	124.93	0.213				-1	 	0	47	618.1140678563286	617.1067913897285	1	618.117919921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14689	5134	19824
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19826	50.198	NaN	1683.7	30	0	193.61	0.106			+	11701	FRSRCPGPAR	10	62	573.8009643554688	NaN	0	573.8009643554688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FRSRCPGPAR_	REV__ENST00000455270.5_1_3:186857033-186857162:-|nuORF	36.446750945000026	0.3805027428805705	6				NaN	NaN	0	NaN	14690	5134	19824
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19827	50.2	NaN	1520.5	30	0	153.33	0.037			+	29715	PHKPCLCHW	9	54	560.7618996398663	1119.5092463465326	2	561.2678833007812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_PHKPCLCHW_	REV__nc|ENSG00000143641|Q10471-2|GALNT2	44.53106598305862	0.36711179743858174	6				NaN	NaN	0	NaN	14691	5134	19824
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19834	50.216	NaN	1264.7	30	0	73.549	0.214	+			11156	FGKVGCKL	8	53	426.24582958196066	NaN	0	426.2462463378906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_FGKVGCKL_	ENSG00000135577|ENST00000258042|NMBR	19.359975847455235	1.7418937515398478	6				NaN	NaN	0	NaN	14695	5137	19833
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19835	50.22	NaN	1584.9	30	0	119.28	0.037	+			50365	WVSAWLPVF	9	47	368.86962069100764	NaN	0	368.86968994140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_WVSAWLPVF_	ENST00000484537.2_1_1:1397881-1403907:+|nuORF	28.2542754592877	0.3349171602345879	6				NaN	NaN	0	NaN	14696	5137	19833
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19840	50.235	NaN	948.14	30	0	76.638	0.139			+	38384	SRTKLITET	9	37	350.2068396182074	NaN	0	350.2066650390625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SRTKLITET_	REV__ENSG00000130558|ENST00000371793|OLFM1;REV__nc|ENSG00000130558|Q99784-3|OLFM1;REV__nc|ENSG00000130558|Q99784-5|OLFM1	23.04248740728303	0.3589936788096251	6				NaN	NaN	0	NaN	14698	5140	19839
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19845	50.254	NaN	1579.1	30	0	179.9	0.143	+			38331	SRGTVHHIL	9	53	510.29154329518946	NaN	0	510.2913513183594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SRGTVHHIL_	ENST00000219139.7_1_16:67181056-67181152:+|nuORF	47.91560031466742	0.22105767942158736	6				NaN	NaN	0	NaN	14700	5143	19844
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19849	50.271	NaN	1837.7	30	0	107.56	0.143			+	-1	VPILKCCK	8	59	509.2827850719126	1016.5510172106252	2	509.28424072265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_VPILKC(Carbamidomethyl (C))C(Carbamidomethyl (C))K_	REV__ENSG00000124786|ENST00000644923|SLC35B3;REV__nc|ENSG00000124786|Q9H1N7-3|SLC35B3	33.51558372728122	0.7005509609380386	6				NaN	NaN	0	NaN	14701	5146	19848
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19856	50.303	NaN	2693	30	0	692.34	0.145			+	-1	ARKSSMPIGR	10	49	373.54395602932397	NaN	0	373.5435791015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ARKSSM(Oxidation (M))PIGR_	REV__ENST00000444117.5_1_11:47291305-47291413:+|nuORF	27.047317107675042	0.41136583337917604	6				NaN	NaN	0	NaN	14702	5152	19855
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19867	50.353	NaN	1804.7	30	0	100.16	0.143	+			34490	RVDRRGSR	8	59	501.2890643353863	1000.5635757375726	2	501.2904052734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RVDRRGSR_	ENST00000434206.1_1_3:43020805-43095327:+|nuORF	21.9598887501803	0.7897753010812679	6				NaN	NaN	0	NaN	14704	5161	19866
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19871	50.369	NaN	4107	30	0	860.48	0.214			+	33361	RHLQGRIQ	8	46	336.5344378546052	NaN	0	336.5345458984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RHLQGRIQ_	REV__CON__Q3T052	26.79610172149135	1.7418937515398478	6				NaN	NaN	0	NaN	14705	5164	19870
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19872	50.373	NaN	1232.6	30	0	116.3	0.035			+	18165	ILRESPEPS	9	52	514.2754720032815	1026.536391073363	2	514.2765502929688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ILRESPEPS_	REV__ENSG00000185610|ENST00000332700|DBX2	30.503639358989545	0.5181749237905803	6				NaN	NaN	0	NaN	14706	5164	19870
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19876	50.388	NaN	2855.1	30	0	330.83	0.143				-1	 	0	63	510.3145892859232	1018.6146256386464	2	510.3160400390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14707	5167	19875
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19880	50.404	NaN	2297.3	30	0	1230.2	0.214	+			1727	AHFEPTCE	8	48	467.1918793067296	932.3692056802593	2	467.1934509277344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AHFEPTCE_	ENSG00000180815|ENST00000338883|MAP3K15;ENST00000470101.1_1_X:19378869-19390989:-|nuORF;ENST00000518578.5_1_X:19378869-19431499:-|nuORF;nc|ENSG00000180815|Q6ZN16-2|MAP3K15;nc|ENSG00000180815|Q6ZN16-3|MAP3K15	14.664097394203935	0.7913966407026132	6				NaN	NaN	0	NaN	14708	5170	19879
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19881	50.408	NaN	2440.5	30	0	169.2	0.031				-1	 	0	55	369.2109099367973	736.4072669403946	2	369.2120666503906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14709	5170	19879
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19893	50.457	NaN	7827.5	30	0	344.75	0.214				-1	 	0	94	523.3024332440201	1044.5903135548401	2	523.3040161132812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14712	5179	19892
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19894	50.46	NaN	3197.7	30	0	596.5	0.037				-1	AGRVGCKELK	10	51	373.20987774270935	NaN	0	373.2096252441406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_AGRVGC(Carbamidomethyl (C))KELK_	ENST00000412565.2_3_14:24024951-24025206:-|nuORF	22.579656572578934	0.4201028297492154	6				NaN	NaN	0	NaN	14713	5179	19892
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19898	50.475	NaN	1434.6	30	0	71.898	0.215	+			50529	YAPSGTPQAVN	11	56	552.7700694088844	NaN	0	552.76904296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YAPSGTPQAVN_	nc|ENSG00000168060|Q9UQQ1-2|NAALADL1	37.59989570853033	0.39784920612721525	6				NaN	NaN	0	NaN	14714	5182	19897
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19899	50.479	NaN	1386	30	0	159.98	0.034				-1	EMMVGGLAP	9	51	468.714002720951	NaN	0	468.7141418457031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	2 Oxidation (M)	_EM(Oxidation (M))M(Oxidation (M))VGGLAP_	ENSG00000131095|ENST00000588735|GFAP;nc|ENSG00000131095|P14136-2|GFAP;nc|ENSG00000131095|P14136-3|GFAP	35.200714571348534	0.2998460331538257	6				NaN	NaN	0	NaN	14715	5182	19897
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19903	50.494	NaN	1324	30	0	128.4	0.145			+	-1	GKQLMREKK	9	66	567.3304024215022	NaN	0	567.331298828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_GKQLM(Oxidation (M))REKK_	REV__ENSG00000164889|ENST00000413384|SLC4A2;REV__nc|ENSG00000164889|P04920-2|SLC4A2;REV__nc|ENSG00000164889|P04920-3|SLC4A2	30.317721548370564	0.32449924987115025	6				NaN	NaN	0	NaN	14716	5185	19902
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19908	50.511	NaN	1350.1	30	0	95.525	0.145	+			49565	VYDQQREVY	9	55	600.2904853320675	NaN	0	600.2896728515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYDQQREVY_	CEP55|p.D247Ifs*9|1|0.25|ENSG00000138180|chr10:93516987-93516987|A/-|frameshift_variant;ENSG00000138180|ENST00000371485|CEP55;nc|ENSG00000138180|Q53EZ4-2|CEP55	35.61828744233558	0.29773779453147337	6				NaN	NaN	0	NaN	14718	5188	19907
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19913	50.528	NaN	2481.5	30	0	218.06	0.214	+			6591	AYLSGMLRF	9	64	529.2775536901952	1056.5405544471903	2	529.27880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AYLSGMLRF_	ENSG00000167881|ENST00000307877|SRP68;ENST00000587864.1_1_17:74057571-74060203:-|nuORF;nc|ENSG00000167881|Q9UHB9-2|SRP68;nc|ENSG00000167881|Q9UHB9-4|SRP68	78.26377905018397	0.10505600812668463	6				NaN	NaN	0	NaN	14720	5191	19912
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19914	50.531	NaN	2649.2	30	0	1127.9	0.106				-1	 	0	51	434.75799506761564	867.5014372020313	2	434.7590026855469	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14721	5191	19912
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19915	50.533	NaN	1400.4	30	0	77.723	0.036	+			26034	LSLGSVLSASR	11	69	545.3172607421875	NaN	0	545.3172607421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LSLGSVLSASR_	ENSG00000154328|ENST00000284503|NEIL2;ENST00000524741.1_1_8:11640652-11643779:+|nuORF;nc|ENSG00000154328|Q969S2-2|NEIL2;nc|ENSG00000154328|Q969S2-3|NEIL2;nc|ENSG00000154328|Q969S2-4|NEIL2	33.921630207806714	0.41424167740351664	6				NaN	NaN	0	NaN	14722	5191	19912
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19922	50.566	NaN	1603.6	30	0	207.96	0.141	+			29720	PHLGLLMA	8	52	426.24480829145864	850.4750636497173	2	426.2453918457031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PHLGLLMA_	ENST00000462742.1_1_21:45755312-45758250:-|nuORF	33.49298260027079	0.7007254697536482	6				NaN	NaN	0	NaN	14723	5197	19921
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19937	50.634	NaN	1199.6	30	0	530.32	0.141			+	48518	VTNKTLLP	8	45	443.27191162109375	NaN	0	443.27191162109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTNKTLLP_	REV__tr|U7T3R0|U7T3R0_FUSNUFlavoproteindomain-containingproteinOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00501PE=4SV=1	19.359975847455235	1.7418937515398478	6				NaN	NaN	0	NaN	14726	5209	19936
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19953	50.716	NaN	3487.3	30	0	469.35	0.143	+			12097	GAAVLHQRR	9	46	336.5344378546052	NaN	0	336.53424072265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GAAVLHQRR_	ENST00000480991.1_1_1:1597188-1601283:-|nuORF	18.324413293986947	0.3749620627292244	6				NaN	NaN	0	NaN	14727	5224	19952
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19957	50.732	NaN	1835.3	30	0	164	0.142			+	24876	LKGIPTVMA	9	62	465.2799959762217	NaN	0	465.2802734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LKGIPTVMA_	REV__ENST00000589450.5_1_18:53745418-53763461:+|nuORF	29.14955571784316	0.3303970763161698	6				NaN	NaN	0	NaN	14728	5227	19956
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19961	50.749	NaN	1074.9	30	0	184.64	0.214	+			49703	VYLLNSTTL	9	42	512.2894916642845	NaN	0	512.2896728515625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYLLNSTTL_	nc|ENSG00000109572|P51790-2|CLCN3	45.9519527083369	0.2345902329052062	6				NaN	NaN	0	NaN	14729	5230	19960
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19962	50.752	NaN	2761.4	30	0	1174.9	0.106				-1	 	0	45	414.76049461695084	827.5064363007017	2	415.253173828125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14730	5230	19960
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19963	50.754	NaN	3087.9	30	0	841.98	0.037			+	44284	TSALTVGP	8	54	373.20987774270935	NaN	0	373.20941162109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TSALTVGP_	REV__ENST00000399976.6_1_21:30396952-30400215:+|nuORF	35.200714571348534	1.7418937515398478	6				NaN	NaN	0	NaN	14731	5230	19960
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19973	50.802	NaN	3376.7	30	0	175.13	0.214				-1	 	0	70	523.3024332440201	1044.5903135548401	2	523.303955078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14732	5239	19972
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19974	50.806	NaN	1805.9	30	0	108.01	0.032				-1	 	0	51	406.24728583672754	810.4800187402551	2	406.2483215332031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14733	5239	19972
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19978	50.821	NaN	1940.9	30	0	1153.9	0.214				-1	 	0	38	423.2737744408753	844.5329959485506	2	423.2746887207031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14734	5242	19977
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19979	50.824	NaN	2908.5	30	0	606.78	0.037				-1	ATLKNGRKAC	10	44	373.543956419886	NaN	0	373.5436706542969	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_ATLKNGRKAC(Carbamidomethyl (C))_	ENSG00000163739|ENST00000395761|CXCL1;ENST00000509101.1_1_4:74735175-74735707:+|nuORF	32.75053402867276	0.3926392905881664	6				NaN	NaN	0	NaN	14735	5242	19977
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	19984	50.84	NaN	1982.2	30	0	90.783	0.145			+	-1	FLRPCLVTK	9	77	567.328804152508	1132.643055371816	2	567.329833984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_FLRPC(Carbamidomethyl (C))LVTK_	REV__ENST00000566257.5_1_16:69418603-69418636:-|nuORF	24.519189625965996	0.574102787014149	6				NaN	NaN	0	NaN	14737	5245	19983
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20000	50.907	NaN	1644.2	30	0	218.89	0.143	+			9477	EKRETFVQ	8	60	518.7752599220156	1035.5359669108311	2	518.7769775390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EKRETFVQ_	ENSG00000146918|ENST00000356309|NCAPG2;nc|ENSG00000146918|Q86XI2-2|NCAPG2	45.9519527083369	0.6193794311207887	6				NaN	NaN	0	NaN	14741	5257	19999
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20004	50.924	NaN	1240.7	30	0	104.49	0.145	+			49866	VYSRYFTTY	9	55	600.2904853320675	NaN	0	600.2908325195312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	67.49366992349736	0.1173583512313808	6				NaN	NaN	0	NaN	14742	5260	20003
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20011	50.957	NaN	3850.6	30	0	312.36	0.144	+			8128	DYSSILQKF	9	65	550.7840687262465	1099.5535845192928	2	550.7848510742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DYSSILQKF_	ENSG00000187239|ENST00000446176|FNBP1;FNBP1|p.N328Kfs*2|1|0.11|ENSG00000187239|chr9:129924963-129924964|-/T|frameshift_variant;nc|ENSG00000187239|Q96RU3-2|FNBP1;nc|ENSG00000187239|Q96RU3-3|FNBP1;nc|ENSG00000187239|Q96RU3-4|FNBP1;nc|ENSG00000187239|Q96RU3-5|FNBP1	136.26810882979174	0.012230845423532208	6				NaN	NaN	0	NaN	14743	5266	20010
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20022	51.008	NaN	2372.9	30	0	170.58	0.214			+	2326	AMLHLAAHLL	10	65	545.3158614575115	1088.6171699818228	2	545.318359375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AMLHLAAHLL_	REV__ENSG00000162144|ENST00000294072|CYB561A3;REV__ENST00000535177.1_1_11:61121022-61124194:-|nuORF;REV__ENST00000540317.5_1_11:61120455-61129340:-|nuORF;REV__nc|ENSG00000162144|Q8NBI2-2|CYB561A3	19.359975847455235	0.718073418909716	6				NaN	NaN	0	NaN	14745	5275	20021
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20023	51.011	NaN	1265.5	30	0	123.8	0.035	+			41272	SVLKFISVL	9	53	503.3197894868025	1004.625026040405	2	503.8230895996094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_SVLKFISVL_	ENST00000490738.5_1_1:6932031-6932076:+|nuORF	25.57405402267927	0.5642445186134241	6				NaN	NaN	0	NaN	14746	5275	20021
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20033	51.057	NaN	3448.9	30	0	805.96	0.143	+			34984	SAAPRPPRR	9	45	336.5344378546052	NaN	0	336.53436279296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SAAPRPPRR_	SOX9|p.P307Cfs*77|1|0.27|ENSG00000125398|chr17:72123772-72123773|-/GT|frameshift_variant;SOX9|p.V291Afs*92|1|0.55|ENSG00000125398|chr17:72123729-72123729|T/-|frameshift_variant;SOX9|p.V306Cfs*77|2|0.32|ENSG00000125398|chr17:72123769-72123769|G/-|frameshift_variant	21.9598887501803	0.3626577482100488	6				NaN	NaN	0	NaN	14747	5284	20032
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20038	51.075	NaN	1764	30	0	178.48	0.145	+			2773	ARMTREAKAA	10	49	368.8697412483271	NaN	0	368.869384765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ARMTREAKAA_	SH3PXD2B|p.G814Afs*37|1|0.38|ENSG00000174705|chr5:172338664-172338664|C/-|frameshift_variant	36.31764250033197	0.3809266711384728	6				NaN	NaN	0	NaN	14749	5287	20037
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20042	51.092	NaN	3055.3	30	0	847.52	0.214			+	46113	VDGLGLTA	8	42	373.20987774270935	NaN	0	373.2098693847656	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VDGLGLTA_	REV__ENST00000466110.5_1_2:74595806-74598423:-|nuORF	35.200714571348534	1.7418937515398478	6				NaN	NaN	0	NaN	14750	5290	20041
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20043	51.095	NaN	2006	30	0	1035.3	0.032			+	21832	KRGGGPRP	8	46	412.7464593766289	NaN	0	412.7464599609375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_KRGGGPRP_	REV__ENST00000433510.2_1_17:46724166-46724286:-|nuORF	13.775330524044264	1.7418937515398478	6				NaN	NaN	0	NaN	14751	5290	20041
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20052	51.129	NaN	1216.7	30	0	121.04	0.138	+			3105	ASGLGAPL	8	37	343.19766570240824	NaN	0	343.1978759765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASGLGAPL_	CSPG4|p.E1665Sfs*10|1|0.39|ENSG00000173546|chr15:75677845-75677845|G/-|frameshift_variant;ENSG00000173546|ENST00000308508|CSPG4	25.450171626174864	1.7418937515398478	6				NaN	NaN	0	NaN	14754	5296	20051
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20056	51.145	NaN	1710	30	0	136.27	0.143	+			15840	GWLLICKGR	9	65	523.3024332440201	1044.5903135548401	2	523.3043823242188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GWLLICKGR_	nc|ENSG00000131697|O75161-2|NPHP4	18.324413293986947	0.6112419832031293	6				NaN	NaN	0	NaN	14755	5299	20055
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20060	51.162	NaN	3288.1	30	0	818.81	0.214				-1	ERVRIVMAQ	9	49	373.20987774270935	NaN	0	373.2101745605469	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ERVRIVM(Oxidation (M))AQ_	tr|U7T3Q6|U7T3Q6_FUSNUDioldehydratasereactivasesubunitalphaOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00496PE=4SV=1	32.81241826257853	0.3119040447479903	6				NaN	NaN	0	NaN	14756	5302	20059
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20061	51.166	NaN	1667.2	30	0	138.1	0.036	+			9763	ENLLVSETTD	10	69	560.7729819383037	1119.5314109434073	2	560.7744140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ENLLVSETTD_	ENST00000491683.6_1_X:1413309-1414421:+|nuORF	37.50817390946774	0.5721060100277453	6				NaN	NaN	0	NaN	14757	5302	20059
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20069	51.198	NaN	1640.3	30	0	147.42	0.145	+			21405	KMPKPKPPPN	10	65	567.328804152508	1132.643055371816	2	567.3306884765625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KMPKPKPPPN_	ENSG00000112237|ENST00000520429|CCNC;ENST00000326298.8_1_6:99991433-99997239:-|nuORF;nc|ENSG00000112237|P24863-2|CCNC	34.172542307311794	0.6007644933930345	6				NaN	NaN	0	NaN	14759	5308	20068
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20074	51.215	NaN	3967.1	30	0	348.6	0.145	+			42121	SYLLRPMVF	9	59	563.3090013553706	1124.603449777541	2	563.3113403320312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SYLLRPMVF_	ENSG00000137860|ENST00000347644|SLC28A2	71.87747018426188	0.13267044672804276	6				NaN	NaN	0	NaN	14761	5311	20073
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20078	51.231	NaN	2034.5	30	0	337.43	0.214	+			19152	IYPTTYVQF	9	72	566.2889739445177	1130.5633949558353	2	566.2911987304688	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IYPTTYVQF_	ENSG00000179820|ENST00000391770|MYADM	85.86182877749512	0.07653218437724067	6				NaN	NaN	0	NaN	14762	5314	20077
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20079	51.235	NaN	1643.2	30	0	285.36	0.035	+			10289	ETNFNKVF	8	55	499.7493737001023	997.4841944670046	2	499.7504577636719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ETNFNKVF_	ENSG00000111879|ENST00000338891|FAM184A;nc|ENSG00000111879|Q8NB25-3|FAM184A;nc|ENSG00000111879|Q8NB25-4|FAM184A	71.29570347882199	0.39610197767395533	6				NaN	NaN	0	NaN	14763	5314	20077
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20086	51.265	NaN	1115.3	30	0	177.78	0.144			+	-1	MLSDSVSLMT	10	49	558.2503051757812	NaN	0	558.2503051757812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Oxidation (M)	_M(Oxidation (M))LSDSVSLM(Oxidation (M))T_	REV__ENSG00000113108|ENST00000357560|APBB3;REV__ENST00000509914.5_1_5:139938172-139941496:-|nuORF;REV__ENST00000515056.5_1_5:139938172-139941333:-|nuORF;REV__nc|ENSG00000113108|O95704-2|APBB3;REV__nc|ENSG00000113108|O95704-3|APBB3;REV__nc|ENSG00000113108|O95704-4|APBB3	27.882242232435846	0.4086243523356342	6				NaN	NaN	0	NaN	14764	5320	20085
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20091	51.282	NaN	1944.5	30	0	122.52	0.145	+			49857	VYSRYFTTY	9	70	600.2896400912298	1198.5647272492595	2	600.793212890625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	42.86426827375447	0.38666266728046506	6				NaN	NaN	0	NaN	14766	5323	20090
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20101	51.331	NaN	2843.8	30	0	642.58	0.144	+			6636	AYTLLLHTW	9	65	559.3053271850459	1116.5961014368918	2	559.3073120117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AYTLLLHTW_	DOCK2|p.M1388Gfs*7|1|0.05|ENSG00000134516|chr5:170050344-170050345|-/AGGATGCTCATTAGAGATTT|frameshift_variant;DOCK2|p.N1321Kfs*10|1|0.37|ENSG00000134516|chr5:170045899-170045900|-/A|frameshift_variant;ENSG00000134516|ENST00000520908|DOCK2;ENST00000523351.5_1_5:169188379-169509859:+|nuORF	87.75429964447693	0.0711966946989736	6				NaN	NaN	0	NaN	14767	5332	20100
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20105	51.347	NaN	4309.9	30	0	219.28	0.214				-1	 	0	84	545.3158614575115	1088.6171699818228	2	545.3179321289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14768	5335	20104
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20106	51.351	NaN	889.04	30	0	150.37	0.036	+			12003	FVTSGSYWD	9	44	531.2346801757812	NaN	0	531.2346801757812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FVTSGSYWD_	CFHR4|p.S63del|1|0.23|ENSG00000134365|chr1:196902547-196902549|CTT/-|inframe_deletion	37.15910966729921	0.2899585034171616	6				NaN	NaN	0	NaN	14769	5335	20104
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20116	51.398	NaN	3358	30	0	666.61	0.143	+			33380	RHVRPCKL	8	41	336.8686715547861	NaN	0	336.8687744140625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RHVRPCKL_	ENST00000579724.5_2_17:66244244-66246408:+|nuORF	26.79610172149135	1.7418937515398478	6				NaN	NaN	0	NaN	14770	5344	20115
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20121	51.416	NaN	1800.3	30	0	191.19	0.144	+			5881	AVIVWSFMK	9	58	540.7982651441171	1079.581977355034	2	540.8002319335938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AVIVWSFMK_	ENST00000514133.1_1_4:52895917-52895998:-|nuORF	54.776311868738084	0.25715957988447635	6				NaN	NaN	0	NaN	14772	5347	20120
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20138	51.5	NaN	7139.6	30	0	1142.9	0.144	+			6704	AYVLNIVRF	9	60	547.820332572264	1093.6261122113278	2	547.8238525390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AYVLNIVRF_	ATP1B1|p.L184Hfs*6|1|0.09|ENSG00000143153|chr1:169127391-169127392|-/A|frameshift_variant;ENSG00000143153|ENST00000367815|ATP1B1;nc|ENSG00000143153|P05026-2|ATP1B1	143.8867514904718	0.008656634767784652	6				NaN	NaN	0	NaN	14774	5362	20137
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20143	51.516	NaN	1517.8	30	0	76.379	0.214				-1	 	0	48	391.22388635944327	780.4332197856866	2	391.224853515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14776	5365	20142
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20144	51.52	NaN	886.63	30	0	148.81	0.106	+			4859	ATPLSTLSL	9	41	451.7629419394311	NaN	0	451.7630310058594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ATPLSTLSL_	ENSG00000004487|ENST00000400181|KDM1A;nc|ENSG00000004487|O60341|KDM1A	51.33545320467046	0.19748963086191895	6				NaN	NaN	0	NaN	14777	5365	20142
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20145	51.522	NaN	1469.2	30	0	89.042	0.037			+	-1	MLVVKMTRAP	10	63	581.3300477605275	NaN	0	581.329345703125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_MLVVKM(Oxidation (M))TRAP_	REV__ENSG00000093183|ENST00000264454|SEC22C	36.446750945000026	0.3805027428805705	6				NaN	NaN	0	NaN	14778	5365	20142
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20150	51.537	NaN	1417	30	0	123.31	0.145				-1	WKRLIMLSA	9	63	567.3288906150569	1132.6432282969138	2	567.3306274414062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_WKRLIM(Oxidation (M))LSA_	ENST00000337198.9_1_8:103845385-103846436:-|nuORF	23.04248740728303	0.5879033540491928	6				NaN	NaN	0	NaN	14780	5368	20149
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20155	51.554	NaN	2917.3	30	0	580.97	0.145				-1	ATLEIIVVMN	10	47	373.5428922922946	1117.6068474770839	3	373.5447082519531	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_ATLEIIVVM(Oxidation (M))N_	ENSG00000142619|ENST00000375460|PADI3;PADI3|p.A580Qfs*9|1|0.31|ENSG00000142619|chr1:17280767-17280767|A/-|frameshift_variant	26.063383197487333	0.6669871633831898	6				NaN	NaN	0	NaN	14782	5371	20154
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20165	51.604	NaN	1638.2	30	0	799.2	0.142				-1	 	0	44	456.77154143068077	911.5285299281616	2	456.77252197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14783	5380	20164
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20169	51.621	NaN	1344.3	30	0	110.19	0.145	+			18124	ILFELCVGRK	10	65	589.3413765705117	1176.6682002078232	2	589.3443603515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ILFELCVGRK_	ENSG00000145348|ENST00000394708|TBCK;nc|ENSG00000145348|Q8TEA7-3|TBCK	20.94693142431847	0.7087701759873708	6				NaN	NaN	0	NaN	14784	5383	20168
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20173	51.637	NaN	1829.3	30	0	187.05	0.213	+			49858	VYSRYFTTY	9	73	600.289303053066	1198.5640531729318	2	600.29150390625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	40.77816245573522	0.41113185337114944	6				NaN	NaN	0	NaN	14785	5386	20172
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20174	51.641	NaN	1249.8	30	0	166.24	0.035			+	11378	FLLIELLF	8	48	504.3103332519531	NaN	0	504.3103332519531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_FLLIELLF_	REV__ENST00000525438.5_1_11:46139644-46141386:-|nuORF;REV__ENST00000533757.5_1_11:46105825-46141386:-|nuORF	28.2542754592877	1.7418937515398478	6				NaN	NaN	0	NaN	14786	5386	20172
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20178	51.655	NaN	1748.4	30	0	165.71	0.143	+			1483	AFMKGVFTF	9	66	524.2695233345338	1046.5244937358675	2	524.2710571289062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AFMKGVFTF_	ENSG00000244187|ENST00000290079|TMEM141;ENST00000465017.5_1_9:139685862-139687281:+|nuORF;ENST00000489739.1_1_9:139685858-139686514:+|nuORF	82.24051045832904	0.08786059719216216	6				NaN	NaN	0	NaN	14787	5389	20177
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20186	51.689	NaN	3449.7	30	0	258.02	0.144			+	-1	VVKARLPFC	9	76	545.3158614575115	1088.6171699818228	2	545.3186645507812	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_VVKARLPFC(Carbamidomethyl (C))_	REV__ENSG00000121853|ENST00000241256|GHSR;REV__nc|ENSG00000121853|Q92847-2|GHSR	25.450171626174864	0.5654022654467333	6				NaN	NaN	0	NaN	14789	5395	20185
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20193	51.721	NaN	888.68	30	0	122.31	0.142	+			8095	DWVSEGPQ	8	40	459.2033665876555	916.3921802421111	2	459.2049255371094	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DWVSEGPQ_	ENSG00000099812|ENST00000215582|MISP	23.04248740728303	0.7814162927298575	6				NaN	NaN	0	NaN	14790	5401	20192
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20197	51.738	NaN	3165	30	0	678.54	0.214			+	13491	GLLRVRYM	8	40	336.5344378546052	NaN	0	336.53448486328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GLLRVRYM_	REV__ENST00000481125.5_1_6:27220693-27222867:+|nuORF	21.70233525837049	1.7418937515398478	6				NaN	NaN	0	NaN	14791	5404	20196
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20198	51.741	NaN	1129.1	30	0	131.23	0.038	+			51584	YYLVQGLIED	10	38	404.876953125	NaN	0	404.876953125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YYLVQGLIED_	ENSG00000174943|ENST00000568000|KCTD13;ENST00000563264.1_1_16:29922856-29934675:-|nuORF	17.468008924990375	0.4201028297492154	6				NaN	NaN	0	NaN	14792	5404	20196
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20206	51.772	NaN	2327.1	30	0	843.46	0.214				-1	 	0	50	326.14274037990896	650.2709278266179	2	326.14373779296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14794	5410	20205
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20207	51.775	NaN	1370.9	30	0	126.8	0.106				-1	 	0	51	487.1919733436277	972.3693937540554	2	487.1937561035156	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14795	5410	20205
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20208	51.777	NaN	1642.6	30	0	234.49	0.036	+			42767	TDVMTSEPPK	10	57	552.7688110625	NaN	0	552.768310546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_TDVMTSEPPK_	tr|U7STE9|U7STE9_FUSNUD-3-phosphoglyceratedehydrogenaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01033PE=3SV=1	34.172542307311794	0.38797011891751465	6				NaN	NaN	0	NaN	14796	5410	20205
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20212	51.791	NaN	3790.4	30	0	781.94	0.214				-1	 	0	57	334.163892207242	666.313231481284	2	334.1649169921875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14797	5413	20211
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20213	51.795	NaN	2736.7	30	0	684.68	0.03				-1	 	0	50	326.175063859416	650.335574785632	2	326.1760559082031	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14798	5413	20211
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20220	51.824	NaN	4764.4	30	0	3153.8	0.143			+	30058	PPYVTYNK	8	48	491.2554022777152	980.4962516222304	2	491.257080078125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PPYVTYNK_	REV__tr|U7STX1|U7STX1_FUSNUUracil-DNAglycosylaseOS=FusobacteriumnucleatumCTI-5OX=1316586GN=ungPE=3SV=1	19.359975847455235	0.7988239741663654	6				NaN	NaN	0	NaN	14799	5419	20219
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20224	51.841	NaN	2570.7	30	0	972.54	0.214				-1	 	0	50	436.77344602907067	871.5323391249414	2	436.7748718261719	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14800	5422	20223
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20225	51.844	NaN	789.43	30	0	101.54	0.035				-1	CPLAHPAQD	9	40	497.2254668548345	992.436380776469	2	497.7304992675781	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))CPLAHPAQD_	ENST00000531958.5_1_11:67184814-67192505:+|nuORF;nc|ENSG00000172508|A5YM72-3|CARNS1	29.14955571784316	0.5308295550522326	6				NaN	NaN	0	NaN	14801	5422	20223
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20232	51.874	NaN	1517.1	30	0	151.06	0.138				-1	 	0	47	339.6487775943336	677.2830022554672	2	339.64959716796875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14802	5428	20231
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20236	51.89	NaN	2601.7	30	0	624.04	0.214	+			1587	AGKRDGLKMAA	11	56	373.20987774270935	NaN	0	373.20977783203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AGKRDGLKMAA_	ENST00000310441.11_1_X:153236792-153236924:-|nuORF	22.561587123415745	0.456735970842152	6				NaN	NaN	0	NaN	14803	5431	20235
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20237	51.894	NaN	822.9	30	0	78.005	0.106			+	-1	SNIDGAMFS	9	34	479.20333445644417	956.3921159796884	2	479.2041931152344	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_SNIDGAM(Oxidation (M))FS_	REV__ENSG00000072071|ENST00000361434|ADGRL1;REV__nc|ENSG00000072071|O94910|ADGRL1	27.882242232435846	0.5426732730940306	6				NaN	NaN	0	NaN	14804	5431	20235
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20238	51.896	NaN	2091.7	30	0	161.55	0.037				-1	ARSLWMLLK	9	65	567.3284623516773	1132.6423717701546	2	567.3301391601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_ARSLWM(Oxidation (M))LLK_	ENSG00000104883|ENST00000221480|PEX11G;ENST00000599519.1_1_19:7542090-7548186:-|nuORF;nc|ENSG00000104883|Q96HA9-2|PEX11G	15.641811463095205	0.6112419832031292	6				NaN	NaN	0	NaN	14805	5431	20235
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20244	51.912	NaN	2325.3	30	0	433.55	0.214				-1	CPGAGGPA	8	46	343.65083096070197	NaN	0	343.65087890625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_C(Carbamidomethyl (C))PGAGGPA_	ENST00000557584.5_1_14:74417012-74426158:+|nuORF	24.504012794735996	1.7418937515398478	6				NaN	NaN	0	NaN	14808	5434	20243
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20245	51.916	NaN	761.02	30	0	65.762	0.031	+			18142	ILKLLICSH	9	34	347.2167930614459	NaN	0	347.21685791015625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ILKLLICSH_	ENST00000371335.4_1_X:119571204-119571369:-|nuORF	32.81241826257853	0.3119040447479903	6				NaN	NaN	0	NaN	14809	5434	20243
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20249	51.93	NaN	2834.5	30	0	676.86	0.214			+	18246	IPAAVSTS	8	50	373.20987774270935	NaN	0	373.2099914550781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_IPAAVSTS_	REV__ENSG00000181143|ENST00000397910|MUC16;REV__MUC16|p.F10843Sfs*11|1|0.22|ENSG00000181143|chr19:8938427-8938427|A/-|frameshift_variant;REV__MUC16|p.H3632Pfs*17|1|0.13|ENSG00000181143|chr19:8965875-8965876|-/G|frameshift_variant;REV__MUC16|p.I2885Dfs*9|1|0.28|ENSG00000181143|chr19:8972486-8972487|-/C|frameshift_variant;REV__MUC16|p.K6604Rfs*26|1|0.27|ENSG00000181143|chr19:8956959-8956959|T/-|frameshift_variant;REV__MUC16|p.L2546Kfs*23|1|0.04|ENSG00000181143|chr19:8973503-8973504|-/CCTT|frameshift_variant;REV__MUC16|p.L8270Wfs*63|1|0.04|ENSG00000181143|chr19:8951962-8951963|-/ACCA|frameshift_variant;REV__MUC16|p.N2936Tfs*6|1|0.17|ENSG00000181143|chr19:8972332-8972332|T/-|frameshift_variant;REV__MUC16|p.N9430Tfs*13|1|0.14|ENSG00000181143|chr19:8948481-8948481|T/-|frameshift_variant;REV__MUC16|p.S4774Ffs*12|1|0.01|ENSG00000181143|chr19:8962451-8962452|-/AC|frameshift_variant;REV__MUC16|p.S6098Wfs*23|1|0.17|ENSG00000181143|chr19:8958477-8958478|-/GGTGACATCTCTTGGCCAACTGACCCTGGACACATCAACC|frameshift_variant;REV__MUC16|p.S6614Lfs*30|1|0.04|ENSG00000181143|chr19:8956931-8956932|-/A|frameshift_variant;REV__MUC16|p.S7713Lfs*5|1|0.45|ENSG00000181143|chr19:8953634-8953634|G/-|frameshift_variant;REV__MUC16|p.T7968Nfs*2|1|0.41|ENSG00000181143|chr19:8952867-8952868|-/T|frameshift_variant;REV__MUC16|p.T8791Qfs*38|1|0.31|ENSG00000181143|chr19:8950403-8950403|G/-|frameshift_variant	37.028477286268924	1.7418937515398478	6				NaN	NaN	0	NaN	14810	5437	20248
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20250	51.933	NaN	1238	30	0	131.66	0.106				-1	MNVYEADM	8	44	515.6973466324004	NaN	0	515.6973266601562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))M(Oxidation (M))NVYEADM_	ENST00000356692.9_1_3:73115739-73115814:+|nuORF	18.324413293986947	1.7418937515398478	6				NaN	NaN	0	NaN	14811	5437	20248
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20251	51.935	NaN	1358.7	30	0	431.05	0.032			+	-1	SSDCTGGT	8	36	392.642303225815	NaN	0	392.6419372558594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Carbamidomethyl (C)	_SSDC(Carbamidomethyl (C))TGGT_	REV__ENSG00000188581|ENST00000306271|KRTAP1-1;REV__KRTAP1-1|p.C133Afs*4|1|0.57|ENSG00000188581|chr17:41041002-41041002|G/-|frameshift_variant	12.959181472943097	1.7418937515398478	6				NaN	NaN	0	NaN	14812	5437	20248
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20255	51.949	NaN	1345.6	30	0	97.825	0.144				-1	REACVRFL	8	57	525.7815792241225	NaN	0	525.7816772460938	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_REAC(Carbamidomethyl (C))VRFL_	ENSG00000149243|ENST00000539798|KLHL35;KLHL35|p.E513Gfs*17|1|0.33|ENSG00000149243|chr11:75423718-75423719|CC/-|frameshift_variant;nc|ENSG00000149243|Q6PF15-2|KLHL35	25.450171626174864	1.7418937515398478	6				NaN	NaN	0	NaN	14813	5440	20254
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20259	51.965	NaN	2078.7	30	0	168.01	0.145				-1	KKAIACLLFGG	11	70	589.3413765705117	1176.6682002078232	2	589.34228515625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_KKAIAC(Carbamidomethyl (C))LLFGG_	ENSG00000100297|ENST00000216122|MCM5;ENST00000493076.5_1_22:35806581-35817581:+|nuORF	20.94693142431847	0.7700749696703488	6				NaN	NaN	0	NaN	14814	5443	20258
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20270	52.013	NaN	1919.8	30	0	214.87	0.145			+	7455	DFLQNVPFGY	10	63	600.2902994748515	NaN	0	600.29052734375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DFLQNVPFGY_	REV__ENSG00000144036|ENST00000272427|EXOC6B;REV__nc|ENSG00000144036|Q9Y2D4-2|EXOC6B	34.172542307311794	0.38797011891751465	6				NaN	NaN	0	NaN	14816	5452	20269
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20274	52.029	NaN	2393.5	30	0	358.4	0.144				-1	VRLMWQKI	8	70	545.3158614575115	1088.6171699818228	2	545.317138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_VRLM(Oxidation (M))WQKI_	ENST00000361138.6_1_9:72892257-72892326:+|nuORF	26.79610172149135	0.7524337208463756	6				NaN	NaN	0	NaN	14817	5455	20273
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20284	52.078	NaN	3263.2	30	0	533.12	0.143	+			3022	ASFDKAKLK	9	42	336.5344378546052	NaN	0	336.5345458984375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASFDKAKLK_	ENSG00000034510|ENST00000233143|TMSB10	23.04248740728303	0.3589936788096251	6				NaN	NaN	0	NaN	14818	5464	20283
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20291	52.109	NaN	2651	30	0	285.07	0.145	+			29921	PLSSPQQTQL	10	63	549.7936216932422	1097.5726904532844	2	549.7952880859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PLSSPQQTQL_	ENSG00000158435|ENST00000289382|CNOT11	32.75053402867276	0.6123771875927935	6				NaN	NaN	0	NaN	14819	5470	20290
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20295	52.125	NaN	3615.4	30	0	374.3	0.144			+	9009	EGAGPGVRVLF	11	62	551.3066163834867	1100.5986798337733	2	551.30810546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EGAGPGVRVLF_	REV__ENSG00000082516|ENST00000285873|GEMIN5;REV__GEMIN5|p.H864Sfs*18|1|0.34|ENSG00000082516|chr5:154904549-154904550|-/A|frameshift_variant	52.936696900407355	0.3865048210802777	6				NaN	NaN	0	NaN	14820	5473	20294
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20303	52.158	NaN	1463.8	30	0	98.042	0.214				-1	 	0	41	334.163892207242	666.313231481284	2	334.16485595703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14822	5479	20302
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20304	52.161	NaN	935.56	30	0	199.28	0.106				-1	 	0	40	326.175063859416	650.335574785632	2	326.1759338378906	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14823	5479	20302
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20305	52.163	NaN	1493.4	30	0	89.663	0.038			+	-1	PPLPATIRLMP	11	67	611.3561401367188	NaN	0	611.3561401367188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Oxidation (M)	_PPLPATIRLM(Oxidation (M))P_	REV__ENSG00000063015|ENST00000317338|SEZ6;REV__nc|ENSG00000063015|Q53EL9-2|SEZ6;REV__nc|ENSG00000063015|Q53EL9-3|SEZ6;REV__nc|ENSG00000063015|Q53EL9-4|SEZ6;REV__SEZ6|p.P306Lfs*27|1|0.38|ENSG00000063015|chr17:28969896-28969896|C/-|frameshift_variant;REV__SEZ6|p.P892Hfs*50|1|0.15|ENSG00000063015|chr17:28957062-28957062|G/-|frameshift_variant	18.262085536374414	0.456735970842152	6				NaN	NaN	0	NaN	14824	5479	20302
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20318	52.226	NaN	2721.1	30	0	411.32	0.214			+	45051	TVGPSSVV	8	46	373.20987774270935	NaN	0	373.2106018066406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVGPSSVV_	REV__ENSG00000183495|ENST00000389561|EP400;REV__nc|ENSG00000183495|Q96L91-3|EP400;REV__nc|ENSG00000183495|Q96L91-4|EP400;REV__nc|ENSG00000183495|Q96L91-5|EP400;REV__nc|ENSG00000183495|Q96L91|EP400	26.79610172149135	1.7418937515398478	6				NaN	NaN	0	NaN	14825	5491	20317
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20319	52.229	NaN	815.11	30	0	107.16	0.034	+			47340	VPDSGTGPSL	10	41	465.2327575683594	NaN	0	465.2327575683594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VPDSGTGPSL_	ENST00000270328.8_1_19:8660697-8660772:-|nuORF	27.882242232435846	0.4086243523356342	6				NaN	NaN	0	NaN	14826	5491	20317
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20323	52.244	NaN	5114.1	30	0	324.93	0.145			+	21554	KNVPIPHCLL	10	83	567.3284623516773	1132.6423717701546	2	567.3302001953125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KNVPIPHCLL_	REV__ENST00000580828.1_1_17:62223339-62223660:+|nuORF	21.9598887501803	0.7004979571547932	6				NaN	NaN	0	NaN	14827	5494	20322
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20341	52.325	NaN	1521.1	30	0	453.07	0.214				-1	SCCESSCCRP	10	36	396.80181884765625	NaN	0	396.80181884765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	2 Carbamidomethyl (C)	_SCCESSC(Carbamidomethyl (C))C(Carbamidomethyl (C))RP_	CON__Q9BYQ5;CON__Q9BYQ8;ENSG00000198090|ENST00000345847|KRTAP4-6;ENSG00000198271|ENST00000343246|KRTAP4-5;ENSG00000204880|ENST00000333822|KRTAP4-8;ENSG00000212721|ENST00000391413|KRTAP4-11;ENSG00000212722|ENST00000391415|KRTAP4-9;ENSG00000213416|ENST00000394014|KRTAP4-12	11.096761811581379	0.4201028297492154	6				NaN	NaN	0	NaN	14830	5509	20340
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20342	52.329	NaN	1229.5	30	0	83.924	0.037			+	51021	YKGLGRAKER	10	60	589.343456484426	NaN	0	589.343505859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_YKGLGRAKER_	REV__ENSG00000169756|ENST00000544547|LIMS1;REV__ENSG00000256671|ENST00000632897|LIMS4;REV__ENSG00000256977|ENST00000480744|LIMS3;REV__ENST00000422797.5_1_2:109288812-109289630:+|nuORF;REV__nc|ENSG00000169756|P48059-3|LIMS1;REV__nc|ENSG00000169756|P48059-4|LIMS1;REV__nc|ENSG00000169756|P48059-5|LIMS1;REV__nc|ENSG00000169756|P48059|LIMS1;REV__nc|ENSG00000256977|P0CW19-2|LIMS3	31.529811441608018	0.39664753963064203	6				NaN	NaN	0	NaN	14831	5509	20340
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20362	52.424	NaN	3672.4	30	0	735.36	0.214			+	12216	GARLANHRI	9	39	336.5344378546052	NaN	0	336.53424072265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GARLANHRI_	REV__BAZ1B|p.A1298Cfs*10|1|0.16|ENSG00000009954|chr7:73444083-73444084|-/G|frameshift_variant;REV__BAZ1B|p.E800Kfs*16|1|0.08|ENSG00000009954|chr7:73477067-73477067|C/-|frameshift_variant;REV__ENSG00000009954|ENST00000339594|BAZ1B;REV__nc|ENSG00000009954|Q9UIG0-2|BAZ1B	18.324413293986947	0.3749620627292244	6				NaN	NaN	0	NaN	14833	5527	20361
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20363	52.428	NaN	2134.9	30	0	158.13	0.038			+	-1	LAPSRGSMTTY	11	60	600.2902994748515	NaN	0	600.2893676757812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_LAPSRGSM(Oxidation (M))TTY_	REV__ENSG00000183317|ENST00000373048|EPHA10;REV__ENST00000446149.6_1_1:38181546-38201012:-|nuORF;REV__EPHA10|p.R869Gfs*10|1|0.12|ENSG00000183317|chr1:37719566-37719566|G/-|frameshift_variant;REV__nc|ENSG00000183317|Q5JZY3-3|EPHA10	29.550750289552195	0.43372083775723597	6				NaN	NaN	0	NaN	14834	5527	20361
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20367	52.442	NaN	1348.3	30	0	60.138	0.145			+	7677	DLERAWVDT	9	61	552.7697143554688	NaN	0	552.7697143554688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DLERAWVDT_	REV__EIF4A3|p.G340E|1|0.17|ENSG00000141543|chr17:80136300-80136300|C/T|missense_variant	37.81151784470057	0.28666463014928195	6				NaN	NaN	0	NaN	14835	5530	20366
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20374	52.474	NaN	2161.3	30	0	497.35	0.145			+	26359	LTAVELQTFP	10	42	373.5439371996624	NaN	0	373.54315185546875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LTAVELQTFP_	REV__ENSG00000136011|ENST00000388887|STAB2;REV__STAB2|p.D1451Efs*112|1|0.03|ENSG00000136011|chr12:103712384-103712385|-/AGTCC|frameshift_variant;REV__STAB2|p.F1633Lfs*22|1|0.36|ENSG00000136011|chr12:103727310-103727310|T/-|frameshift_variant;REV__STAB2|p.P2450Lfs*4|1|0.51|ENSG00000136011|chr12:103761396-103761396|C/-|frameshift_variant;REV__STAB2|p.R1889Pfs*3|1|0.41|ENSG00000136011|chr12:103737740-103737741|-/G|frameshift_variant	23.04248740728303	0.42010282974921537	6				NaN	NaN	0	NaN	14836	5536	20373
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20381	52.507	NaN	1401.9	30	0	147.36	0.145			+	20580	KFVKTANLVMA	11	60	611.3544667443266	1220.694380555453	2	611.3571166992188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KFVKTANLVMA_	REV__ENSG00000163564|ENST00000368140|PYHIN1;REV__ENST00000485134.1_1_1:158911778-158914889:+|nuORF;REV__nc|ENSG00000163564|Q6K0P9-2|PYHIN1;REV__nc|ENSG00000163564|Q6K0P9-3|PYHIN1;REV__nc|ENSG00000163564|Q6K0P9-4|PYHIN1	23.52269567125451	0.7430573033454468	6				NaN	NaN	0	NaN	14837	5542	20380
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20391	52.556	NaN	1145.5	30	0	192.24	0.138			+	5119	ATSSRRPPR	9	39	343.19766570240824	NaN	0	343.1977233886719	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ATSSRRPPR_	REV__ENST00000525036.1_1_13:48877982-48934322:+|nuORF	29.170058357718403	0.3302935627494407	6				NaN	NaN	0	NaN	14838	5551	20390
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20398	52.588	NaN	2635.6	30	0	113.26	0.214			+	30027	PPQHAVKLML	10	76	567.3284623516773	1132.6423717701546	2	567.3307495117188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PPQHAVKLML_	REV__ENSG00000112851|ENST00000284037|ERBIN;REV__ENST00000505822.1_1_5:65370974-65372269:+|nuORF;REV__nc|ENSG00000112851|Q96RT1-2|ERBIN;REV__nc|ENSG00000112851|Q96RT1-3|ERBIN;REV__nc|ENSG00000112851|Q96RT1-4|ERBIN;REV__nc|ENSG00000112851|Q96RT1-5|ERBIN;REV__nc|ENSG00000112851|Q96RT1-6|ERBIN;REV__nc|ENSG00000112851|Q96RT1-8|ERBIN;REV__nc|ENSG00000112851|Q96RT1-9|ERBIN	35.61828744233558	0.588957954432594	6				NaN	NaN	0	NaN	14839	5557	20397
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20399	52.592	NaN	3054.8	30	0	726.5	0.037			+	29916	PLRPLADQHA	10	43	373.20987774270935	NaN	0	373.2097473144531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_PLRPLADQHA_	REV__ENSG00000095321|ENST00000318080|CRAT;REV__ENST00000464290.5_1_9:131865327-131873452:-|nuORF;REV__nc|ENSG00000095321|P43155-2|CRAT;REV__nc|ENSG00000095321|P43155-3|CRAT	30.503639358989545	0.4000169810673414	6				NaN	NaN	0	NaN	14840	5557	20397
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20413	52.656	NaN	1326.7	30	0	119.39	0.14				-1	 	0	54	413.2369950701946	824.4594372071892	2	413.23797607421875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14842	5569	20412
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20417	52.673	NaN	1600.9	30	0	593.05	0.142			+	25725	LRREPKTG	8	57	478.78561002910493	NaN	0	478.7861022949219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LRREPKTG_	REV__MORC2|p.S239L|1|0.21|ENSG00000133422|chr22:30941541-30941541|G/A|missense_variant	29.14955571784316	1.7418937515398478	6				NaN	NaN	0	NaN	14843	5572	20416
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20427	52.722	NaN	1450.8	30	0	91.397	0.214			+	-1	FLALSVVCLR	10	59	589.3414688669213	1176.6683848006426	2	589.343505859375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_FLALSVVC(Carbamidomethyl (C))LR_	REV__ENSG00000164142|ENST00000435205|FHIP1A	26.69291269510374	0.6618461711292317	6				NaN	NaN	0	NaN	14844	5581	20426
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20428	52.726	NaN	1078.2	30	0	236.73	0.106				-1	GDCLMKAHQG	10	47	558.7501831054688	NaN	0	558.7501831054688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_GDC(Carbamidomethyl (C))LMKAHQG_	ENSG00000074755|ENST00000381638|ZZEF1;ENST00000572426.5_1_17:3937307-3974023:-|nuORF;nc|ENSG00000074755|O43149-2|ZZEF1;ZZEF1|p.K2387Sfs*40|1|0.38|ENSG00000074755|chr17:4022761-4022761|T/-|frameshift_variant	20.94693142431847	0.4201028297492154	6				NaN	NaN	0	NaN	14845	5581	20426
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20429	52.728	NaN	2242.1	30	0	489.95	0.036	+			15877	GYPIHVPAGVT	11	54	555.8009702410843	1109.5873875489685	2	555.802734375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_GYPIHVPAGVT_	ENSG00000068781|ENST00000394754|STON1-GTF2A1L;ENSG00000242441|ENST00000403751|GTF2A1L;nc|ENSG00000242441|Q9UNN4-2|GTF2A1L;nc|ENSG00000243244|Q9Y6Q2-2|STON1	27.882242232435846	0.6973292152807183	6				NaN	NaN	0	NaN	14846	5581	20426
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20436	52.759	NaN	3660.5	30	0	763.27	0.143	+			22120	KSNSFLKAL	9	36	336.5344378546052	NaN	0	336.534423828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KSNSFLKAL_	STK38|p.F382Lfs*70|1|0.16|ENSG00000112079|chr6:36497806-36497806|A/-|frameshift_variant	32.81241826257853	0.3119040447479903	6				NaN	NaN	0	NaN	14847	5587	20435
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20440	52.775	NaN	2078.1	30	0	209.32	0.145			+	-1	LLSVMMDIDF	10	68	600.2887016394465	1198.5628503456928	2	600.2906494140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LLSVM(Oxidation (M))MDIDF_	REV__ENSG00000156928|ENST00000466681|MALSU1;REV__ENST00000481564.1_1_7:23338971-23340720:+|nuORF	29.14955571784316	0.6417842315402807	6				NaN	NaN	0	NaN	14848	5590	20439
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20450	52.824	NaN	1067	30	0	55.551	0.145				-1	LKNFLSAVKVM	11	62	633.3672613122104	1264.7199696912207	2	633.369140625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_LKNFLSAVKVM(Oxidation (M))_	BIN2|p.T500Hfs*24|1|0.33|ENSG00000110934|chr12:51291608-51291609|-/G|frameshift_variant;ENSG00000110934|ENST00000615107|BIN2;ENST00000605039.5_1_12:51696457-51717886:-|nuORF;nc|ENSG00000110934|Q9UBW5-2|BIN2;nc|ENSG00000110934|Q9UBW5-3|BIN2	22.579656572578934	0.7529490144093228	6				NaN	NaN	0	NaN	14849	5599	20449
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20457	52.857	NaN	1888.2	30	0	726.75	0.142				-1	 	0	46	458.7866420458293	915.5587311584586	2	458.78778076171875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14850	5605	20456
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20473	52.937	NaN	1412.5	30	0	161.14	0.214	+			49291	VVQIFRIMQ	9	57	567.3284623516773	1132.6423717701546	2	567.32958984375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVQIFRIMQ_	KCNB1|p.R303Q|1|0.31|ENSG00000158445|chr20:49374652-49374652|C/T|missense_variant	21.9598887501803	0.5980208138527809	6				NaN	NaN	0	NaN	14851	5620	20472
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20474	52.941	NaN	1445.8	30	0	136.56	0.037			+	427	AATSVQMIPLL	11	55	572.3256313648358	NaN	0	572.3262329101562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_AATSVQMIPLL_	REV__ENST00000498676.1_17:34625520-34625688:-|nuORF	41.42661286455405	0.376895999158515	6				NaN	NaN	0	NaN	14852	5620	20472
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20478	52.956	NaN	2784.2	30	0	492.24	0.145			+	10484	EVRKRNSTQ	9	51	373.20987774270935	NaN	0	373.2099304199219	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EVRKRNSTQ_	REV__ENSG00000118557|ENST00000237353|PMFBP1;REV__nc|ENSG00000118557|Q8TBY8-1|PMFBP1;REV__nc|ENSG00000118557|Q8TBY8-4|PMFBP1	37.81151784470057	0.28666463014928195	6				NaN	NaN	0	NaN	14853	5623	20477
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20502	53.072	NaN	3078.4	30	0	132.47	0.214			+	25686	LRGVFLTLGAM	11	76	589.3414688669213	1176.6683848006426	2	589.3433227539062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LRGVFLTLGAM_	REV__ENSG00000106344|ENST00000223073|RBM28;REV__nc|ENSG00000106344|Q9NW13-2|RBM28;REV__RBM28|p.A107Pfs*10|1|0.32|ENSG00000106344|chr7:128339281-128339281|T/-|frameshift_variant;REV__RBM28|p.M599*|2|0.24|ENSG00000106344|chr7:128315014-128315014|T/-|frameshift_variant	18.262085536374414	0.7849791996189919	6				NaN	NaN	0	NaN	14856	5644	20501
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20503	53.076	NaN	1397.8	30	0	168.57	0.035				-1	PKKDIHFM	8	51	516.2724199765976	1030.530287019995	2	516.2732543945312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Oxidation (M)	_PKKDIHFM(Oxidation (M))_	ENSG00000103342|ENST00000434724|GSPT1;ENSG00000189369|ENST00000340438|GSPT2;GSPT2|p.K564Nfs*13|1|0.21|ENSG00000189369|chrX:51745313-51745313|A/-|frameshift_variant;nc|ENSG00000103342|P15170-2|GSPT1;nc|ENSG00000103342|P15170|GSPT1	71.37791200682192	0.3954169775488141	6				NaN	NaN	0	NaN	14857	5644	20501
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20507	53.09	NaN	1806.8	30	0	148.5	0.145			+	47504	VQKKNKYVV	9	43	369.2296132652677	NaN	0	368.8697814941406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VQKKNKYVV_	REV__ENSG00000129595|ENST00000261486|EPB41L4A;REV__ENST00000511405.1_1_5:111575355-111600594:-|nuORF	26.69291269510374	0.34280015626154364	6				NaN	NaN	0	NaN	14858	5647	20506
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20514	53.124	NaN	1134.8	30	0	147.4	0.213	+			49867	VYSRYFTTY	9	63	600.2903944172019	NaN	0	600.2896118164062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	70.8162118820467	0.10318768208603292	6				NaN	NaN	0	NaN	14859	5653	20513
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20515	53.127	NaN	3353.8	30	0	618.09	0.106			+	3201	ASKKIEGKF	9	33	336.5344378546052	NaN	0	336.5343017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_ASKKIEGKF_	REV__tr|U7SUA5|U7SUA5_FUSNUOligopeptidaseFOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01160PE=3SV=1	17.364965105453717	0.37820932774828947	6				NaN	NaN	0	NaN	14860	5653	20513
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20516	53.129	NaN	3457.9	30	0	759.95	0.04	+			26720	LVLAHLFGRRY	11	65	672.8981954377788	1343.7818379423575	2	672.8998413085938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	Unmodified	_LVLAHLFGRRY_	DDX60|p.F1672Lfs*25|1|0.08|ENSG00000137628|chr4:168220678-168220678|A/-|frameshift_variant;ENSG00000137628|ENST00000393743|DDX60;ENST00000507815.1_1_4:169157339-169158551:-|nuORF	15.641811463095205	0.7972481940378109	6				NaN	NaN	0	NaN	14861	5653	20513
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20520	53.144	NaN	1229.9	30	0	106.45	0.214	+			31147	QGGLVANRGR	10	42	343.19766570240824	NaN	0	343.19793701171875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_QGGLVANRGR_	ENSG00000128463|ENST00000267750|EMC4;ENST00000557941.1_1_15:34517315-34518058:+|nuORF;nc|ENSG00000128463|Q5J8M3-2|EMC4;nc|ENSG00000128463|Q5J8M3-3|EMC4	29.170058357718403	0.40439580130713204	6				NaN	NaN	0	NaN	14862	5656	20519
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20521	53.147	NaN	1856.4	30	0	133.39	0.038			+	13585	GLVGQLHWRR	10	59	611.3560956046877	NaN	0	611.3564453125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GLVGQLHWRR_	REV__ENSG00000114812|ENST00000325123|VIPR1;REV__ENST00000498102.1_1_3:42576287-42577770:+|nuORF;REV__nc|ENSG00000114812|P32241-2|VIPR1;REV__nc|ENSG00000114812|P32241-3|VIPR1;REV__nc|ENSG00000114812|P32241-4|VIPR1;REV__nc|ENSG00000114812|P32241-5|VIPR1	16.473147378115264	0.4201028297492154	6				NaN	NaN	0	NaN	14863	5656	20519
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20544	53.259	NaN	1341	30	0	54.384	0.212			+	-1	RLGCRHAALVI	11	61	633.3671657329552	1264.7197785327103	2	633.3692016601562	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_RLGC(Carbamidomethyl (C))RHAALVI_	REV__ENSG00000103254|ENST00000569529|ANTKMT;REV__ENST00000564640.5_1_16:771244-771968:+|nuORF;REV__ENST00000566525.5_1_16:771546-771968:+|nuORF	19.996771675451527	0.7768568223548057	6				NaN	NaN	0	NaN	14865	5677	20543
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20545	53.263	NaN	1977.8	30	0	212.31	0.036			+	-1	CKLEKLCAN	9	56	539.7717288785271	1077.5289048238542	2	539.7738647460938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_CKLEKLC(Carbamidomethyl (C))AN_	REV__ENSG00000175595|ENST00000311895|ERCC4;REV__ERCC4|p.K632Nfs*3|1|0.14|ENSG00000175595|chr16:13937846-13937846|A/-|frameshift_variant;REV__nc|ENSG00000175595|Q92889-2|ERCC4	30.317721548370564	0.5199124245378496	6				NaN	NaN	0	NaN	14866	5677	20543
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20552	53.294	NaN	3132	30	0	727.92	0.145	+			7542	DGVSVLVG	8	42	373.20987774270935	NaN	0	373.2096252441406	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_DGVSVLVG_	ENSG00000161638|ENST00000293379|ITGA5;ITGA5|p.L399Wfs*26|2|0.4|ENSG00000161638|chr12:54405196-54405196|G/-|frameshift_variant;ITGA5|p.Y300Afs*75|1|0.46|ENSG00000161638|chr12:54407655-54407658|GTAA/-|frameshift_variant	20.481830146152948	1.741893751539848	6				NaN	NaN	0	NaN	14867	5683	20551
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20575	53.41	NaN	1826.4	30	0	137.16	0.146			+	-1	GYRLLCILAV	10	69	589.3414688669213	1176.6683848006426	2	589.3432006835938	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_GYRLLC(Carbamidomethyl (C))ILAV_	REV__ENSG00000168890|ENST00000334462|TMEM150A;REV__ENST00000431593.5_1_2:85826201-85828246:-|nuORF;REV__ENST00000444380.5_1_2:85826201-85828277:-|nuORF;REV__nc|ENSG00000168890|Q86TG1-2|TMEM150A	30.503639358989545	0.6307262373768582	6				NaN	NaN	0	NaN	14869	5704	20574
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20588	53.475	NaN	2949.6	30	0	558.02	0.144			+	3202	ASKKIEGKF	9	38	336.5344378546052	NaN	0	336.5343322753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ASKKIEGKF_	REV__tr|U7SUA5|U7SUA5_FUSNUOligopeptidaseFOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_01160PE=3SV=1	24.20275056022122	0.35506675290109213	6				NaN	NaN	0	NaN	14870	5716	20587
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20592	53.492	NaN	1920.5	30	0	78.406	0.213	+			33643	RMIYLQTLLA	10	69	611.354570122391	1220.694587311582	2	611.3561401367188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RMIYLQTLLA_	ENSG00000186716|ENST00000305877|BCR;nc|ENSG00000186716|P11274-2|BCR	25.57405402267927	0.6709832231498071	6				NaN	NaN	0	NaN	14871	5719	20591
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20593	53.496	NaN	1332.1	30	0	211.59	0.038	+			49868	VYSRYFTTY	9	57	600.2906867292792	NaN	0	600.2908325195312	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	58.22992032128504	0.15686832049467786	6				NaN	NaN	0	NaN	14872	5719	20591
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20597	53.511	NaN	1085.5	30	0	95.649	0.144	+			6852	CKLGVRPPAS	10	43	343.19766570240824	NaN	0	343.19769287109375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_CKLGVRPPAS_	TIMELESS|p.R1065C|1|0.42|ENSG00000111602|chr12:56420604-56420604|G/A|missense_variant	20.83715455343099	0.4201028297492154	6				NaN	NaN	0	NaN	14873	5722	20596
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20622	53.642	NaN	1261.6	30	0	132.58	0.144			+	36549	SFLIKKRF	8	50	519.8245239257812	NaN	0	519.8245239257812	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SFLIKKRF_	REV__SLC45A4|p.F801L|1|0.41|ENSG00000022567|chr8:141211596-141211596|G/T|missense_variant	24.20275056022122	1.7418937515398478	6				NaN	NaN	0	NaN	14874	5746	20621
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20629	53.675	NaN	1290	30	0	115.62	0.215	+			13417	GLGGRGQPK	9	56	435.25105511188	NaN	0	435.2510070800781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GLGGRGQPK_	ENSG00000117215|ENST00000375105|PLA2G2D;ENSG00000158786|ENST00000375102|PLA2G2F;nc|ENSG00000117215|Q9UNK4-2|PLA2G2D;nc|ENSG00000158786|Q9BZM2|PLA2G2F	29.14955571784316	0.3303970763161698	6				NaN	NaN	0	NaN	14875	5752	20628
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20630	53.679	NaN	2565.1	30	0	661.99	0.037			+	12366	GDQRFRIAR	9	48	373.5438874749768	NaN	0	373.5447998046875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_GDQRFRIAR_	REV__ENSG00000146729|ENST00000322090|NIPSNAP2;REV__ENST00000415967.2_1_7:56059545-56066762:+|nuORF;REV__nc|ENSG00000146729|O75323-2|NIPSNAP2	21.9598887501803	0.3626577482100488	6				NaN	NaN	0	NaN	14876	5752	20628
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20656	53.808	NaN	1728.1	30	0	440.81	0.139				-1	 	0	38	356.7453027094836	711.4760524857672	2	356.74688720703125	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14878	5776	20655
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20660	53.825	NaN	1989.2	30	0	457.58	0.214				-1	QKIKVVVM	8	59	480.80098495918656	NaN	0	480.8015441894531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_QKIKVVVM(Oxidation (M))_	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42|TTN;TTN|p.A31696Lfs*12|1|0.31|ENSG00000155657|chr2:178537100-178537100|C/-|frameshift_variant;TTN|p.D20259Rfs*40|1|0.44|ENSG00000155657|chr2:178583105-178583106|-/T|frameshift_variant;TTN|p.D21555Ifs*6|1|0.33|ENSG00000155657|chr2:178576659-178576659|G/-|frameshift_variant;TTN|p.D32935Lfs*3|1|0.05|ENSG00000155657|chr2:178532889-178532890|-/AATACAG|frameshift_variant;TTN|p.E20392Dfs*6|1|0.04|ENSG00000155657|chr2:178582357-178582358|-/TTTAAAATTA|frameshift_variant;TTN|p.E20392Kfs*4|1|0.02|ENSG00000155657|chr2:178582359-178582360|-/TTTT|frameshift_variant;TTN|p.G19920Afs*12|1|0.42|ENSG00000155657|chr2:178584961-178584961|G/-|frameshift_variant;TTN|p.G22029Efs*22|2|0.13|ENSG00000155657|chr2:178575125-178575125|T/-|frameshift_variant;TTN|p.I24998Nfs*2|1|0.35|ENSG00000155657|chr2:178566216-178566217|-/T|frameshift_variant;TTN|p.I32444Sfs*4|1|0.08|ENSG00000155657|chr2:178534363-178534363|A/-|frameshift_variant;TTN|p.K26626Nfs*34|1|0.34|ENSG00000155657|chr2:178561331-178561331|T/-|frameshift_variant;TTN|p.K29707Sfs*48|1|0.16|ENSG00000155657|chr2:178547583-178547583|T/-|frameshift_variant;TTN|p.L28648Sfs*6|1|0.24|ENSG00000155657|chr2:178552035-178552036|-/A|frameshift_variant;TTN|p.L33985*|1|0.28|ENSG00000155657|chr2:178528874-178528874|A/-|frameshift_variant;TTN|p.P22810Hfs*10|1|0.03|ENSG00000155657|chr2:178572780-178572781|-/AAAT|frameshift_variant;TTN|p.V22573Cfs*4|2|0.31|ENSG00000155657|chr2:178573492-178573492|C/-|frameshift_variant;TTN|p.V27442Cfs*4|1|0.05|ENSG00000155657|chr2:178558107-178558108|-/A|frameshift_variant	21.70233525837049	1.7418937515398478	6				NaN	NaN	0	NaN	14879	5779	20659
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20661	53.829	NaN	3038.1	30	0	651.85	0.035			+	46630	VGAPKPQIPT	10	38	336.5344378546052	NaN	0	336.5342102050781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VGAPKPQIPT_	REV__ENSG00000063169|ENST00000594866|BICRA;REV__nc|ENSG00000063169|Q9NZM4-2|BICRA	17.364965105453717	0.4201028297492154	6				NaN	NaN	0	NaN	14880	5779	20659
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20665	53.843	NaN	2399.2	30	0	158.72	0.145			+	27421	MLAKGIKQLYG	11	73	611.354570122391	1220.694587311582	2	611.3560180664062	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_MLAKGIKQLYG_	REV__tr|U7T8A7|U7T8A7_FUSNUPTSsystem,N-acetylglucosamine-specificIIBCcomponentOS=FusobacteriumnucleatumCTI-5OX=1316586GN=HMPREF1766_00177PE=4SV=1	19.996771675451527	0.7768568223548057	6				NaN	NaN	0	NaN	14881	5782	20664
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20696	54.007	NaN	2027.5	30	0	182.31	0.145			+	-1	KACNACIRTY	10	66	600.2903595254771	NaN	0	600.2902221679688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_KACNAC(Carbamidomethyl (C))IRTY_	REV__nc|ENSG00000293379|A0ZSE6|TMEM30CP	49.44154591367651	0.30913310806145605	6				NaN	NaN	0	NaN	14882	5812	20695
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20700	54.024	NaN	2853.9	30	0	548.78	0.145			+	44960	TVAVPTAS	8	60	373.20987774270935	NaN	0	373.2100830078125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TVAVPTAS_	REV__ENSG00000136715|ENST00000643581|SAP130;REV__nc|ENSG00000136715|Q9H0E3-3|SAP130;REV__nc|ENSG00000136715|Q9H0E3|SAP130;REV__SAP130|p.R833Kfs*17|1|0.38|ENSG00000136715|chr2:127950308-127950309|-/G|frameshift_variant	35.200714571348534	1.7418937515398478	6				NaN	NaN	0	NaN	14883	5815	20699
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20729	54.171	NaN	3089.1	30	0	495.77	0.143			+	43507	TGSFRRRK	8	37	336.5344378546052	NaN	0	336.5346984863281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TGSFRRRK_	REV__ENSG00000177853|ENST00000316045|ZNF518A;REV__nc|ENSG00000177853|Q6AHZ1-2|ZNF518A;REV__ZNF518A|p.I1254Nfs*11|1|0.18|ENSG00000177853|chr10:96160075-96160076|-/A|frameshift_variant;REV__ZNF518A|p.L1107Ffs*8|1|0.31|ENSG00000177853|chr10:96159635-96159636|-/T|frameshift_variant	13.775330524044264	1.7418937515398478	6				NaN	NaN	0	NaN	14885	5842	20728
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20736	54.205	NaN	1080.5	30	0	73.362	0.145				-1	MLNFLKKAIQ	10	54	611.354570122391	1220.694587311582	2	611.3551635742188	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_M(Oxidation (M))LNFLKKAIQ_	ENSG00000086758|ENST00000262854|HUWE1;ENST00000218328.12_1_X:53611240-53681066:-|nuORF;HUWE1|p.R1657Mfs*13|1|0.21|ENSG00000086758|chrX:53585043-53585044|-/A|frameshift_variant;nc|ENSG00000086758|Q7Z6Z7-2|HUWE1;nc|ENSG00000086758|Q7Z6Z7-3|HUWE1	19.996771675451527	0.7148376616046445	6				NaN	NaN	0	NaN	14886	5848	20735
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20740	54.222	NaN	1264.2	30	0	81.314	0.145			+	20663	KGKTVKFVDIM	11	64	633.3674056760349	1264.7202584188697	2	633.3690795898438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KGKTVKFVDIM_	REV__ENST00000441645.1_1_2:237317014-237317317:-|nuORF	16.71738777980365	0.7922119881075679	6				NaN	NaN	0	NaN	14887	5851	20739
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20750	54.271	NaN	1384.2	30	0	118.6	0.145				-1	VKICASWAGL	10	50	368.86989758390956	NaN	0	368.8694763183594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_VKIC(Carbamidomethyl (C))ASWAGL_	ENSG00000168528|ENST00000373709|SERINC2;ENST00000491976.1_1_1:31888748-31907043:+|nuORF;nc|ENSG00000168528|Q96SA4-2|SERINC2;nc|ENSG00000168528|Q96SA4-3|SERINC2;nc|ENSG00000168528|Q96SA4-4|SERINC2	28.081489160057373	0.40797012399963245	6				NaN	NaN	0	NaN	14888	5860	20749
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20769	54.37	NaN	2945.1	30	0	755.23	0.145	+			2790	ARRKSGDSIQ	10	44	373.20987774270935	NaN	0	373.20977783203125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_ARRKSGDSIQ_	ENSG00000113231|ENST00000264917|PDE8B;nc|ENSG00000284762|O95263-3|PDE8B;nc|ENSG00000284762|O95263-4|PDE8B;nc|ENSG00000284762|O95263-6|PDE8B	32.75053402867276	0.3926392905881664	6				NaN	NaN	0	NaN	14889	5878	20768
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20773	54.386	NaN	946.82	30	0	63.233	0.144			+	10571	EYGLQLYLL	9	46	556.3059439167133	NaN	0	556.306640625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EYGLQLYLL_	REV__ENSG00000179832|ENST00000326134|MROH1;REV__ENST00000532255.5_1_8:145218705-145305309:+|nuORF;REV__ENST00000544576.1_1_8:145297127-145303835:+|nuORF;REV__MROH1|p.P1048Qfs*9|1|0.21|ENSG00000179832|chr8:144248894-144248894|C/-|frameshift_variant;REV__nc|ENSG00000179832|Q8NDA8-2|MROH1	39.252832667884924	0.27938773122138094	6				NaN	NaN	0	NaN	14890	5881	20772
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20799	54.518	NaN	3161.9	30	0	574.28	0.214	+			33873	RRLLYALC	8	39	336.5344378546052	NaN	0	336.5343322753906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RRLLYALC_	ENSG00000185504|ENST00000327787|FAAP100	23.036711822280957	1.7418937515398478	6				NaN	NaN	0	NaN	14892	5905	20798
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20800	54.521	NaN	1606.8	30	0	99.18	0.038	+			49869	VYSRYFTTY	9	64	600.2904626658627	NaN	0	600.2910766601562	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	39.252832667884924	0.27938773122138094	6				NaN	NaN	0	NaN	14893	5905	20798
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20810	54.568	NaN	2186.2	30	0	81.723	0.145			+	51412	YTRSVLMVAIL	11	72	633.3675342002657	1264.7205154673313	2	633.8710327148438	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YTRSVLMVAIL_	REV__ENSG00000117528|ENST00000370214|ABCD3;REV__nc|ENSG00000117528|P28288-2|ABCD3;REV__nc|ENSG00000117528|P28288-3|ABCD3	18.262085536374414	0.7849791996189919	6				NaN	NaN	0	NaN	14894	5914	20809
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20829	54.666	NaN	1421	30	0	123.99	0.142			+	29777	PIGVQIACI	9	58	457.26441434996434	NaN	0	457.2640686035156	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_PIGVQIACI_	REV__ENSG00000149054|ENST00000278319|ZNF215	31.954861631926434	0.3162336699109506	6				NaN	NaN	0	NaN	14895	5932	20828
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20833	54.683	NaN	1625.4	30	0	294.12	0.143			+	48895	VVDKIKGVF	9	57	502.8126899814578	1003.6108270297157	2	502.8147888183594	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VVDKIKGVF_	REV__ENSG00000188107|ENST00000503581|EYS;REV__nc|ENSG00000188107|Q5T1H1|EYS	23.04248740728303	0.5879033540491928	6				NaN	NaN	0	NaN	14896	5935	20832
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20843	54.733	NaN	1264	30	0	176.58	0.143	+			48098	VSTILTGLLS	10	54	502.304754637286	NaN	0	502.3054504394531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VSTILTGLLS_	ENSG00000160087|ENST00000349431|UBE2J2;ENST00000464036.5_1_1:1190585-1197670:-|nuORF;nc|ENSG00000160087|Q8N2K1-2|UBE2J2;nc|ENSG00000160087|Q8N2K1-3|UBE2J2	47.657333605630114	0.3204131577145918	6				NaN	NaN	0	NaN	14897	5944	20842
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20847	54.75	NaN	3075.4	30	0	659.33	0.145	+			36701	SGRWRRRSG	9	47	373.20987774270935	NaN	0	373.2101135253906	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SGRWRRRSG_	ENST00000318967.6_2_1:153700611-153701247:+|nuORF;ENST00000435409.6_2_1:153700651-153701247:+|nuORF	27.882242232435846	0.3367954786602879	6				NaN	NaN	0	NaN	14898	5947	20846
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20873	54.881	NaN	3255.4	30	0	667.85	0.143			+	-1	AAGPLPKPSK	10	40	336.5344378546052	NaN	0	336.53448486328125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))AAGPLPKPSK_	REV__ENST00000580948.1_1_17:70416883-70417330:-|nuORF	25.57405402267927	0.4162033004763879	6				NaN	NaN	0	NaN	14900	5971	20872
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20877	54.898	NaN	1337	30	0	188.02	0.145	+			10585	EYITGPGVTTY	11	60	600.7926635742188	NaN	0	600.7926635742188	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EYITGPGVTTY_	ENSG00000009724|ENST00000400897|MASP2;MASP2|p.F518Lfs*16|1|0.11|ENSG00000009724|chr1:11027392-11027392|A/-|frameshift_variant	26.69291269510374	0.4464570093767436	6				NaN	NaN	0	NaN	14901	5974	20876
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20881	54.915	NaN	992.09	30	0	60.191	0.145			+	22885	KVLLSIHPLMD	11	54	633.36865234375	NaN	0	633.36865234375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_KVLLSIHPLMD_	REV__NOS1AP|p.Q347P|1|0.12|ENSG00000198929|chr1:162365504-162365504|A/C|missense_variant	22.579656572578934	0.456735970842152	6				NaN	NaN	0	NaN	14902	5977	20880
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20897	54.996	NaN	2618.8	30	0	495.21	0.145	+			15469	GVAELGVT	8	46	373.20987774270935	NaN	0	373.5438232421875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GVAELGVT_	ENSG00000105058|ENST00000263384|FAM32A;ENST00000589852.5_1_19:16296199-16296328:+|nuORF;nc|ENSG00000105058|Q9Y421-2|FAM32A	37.028477286268924	1.7418937515398478	6				NaN	NaN	0	NaN	14903	5992	20896
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20916	55.094	NaN	2065	30	0	320.33	0.145			+	-1	ATIDIRRCI	9	40	373.20987774270935	NaN	0	373.2095031738281	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_ATIDIRRC(Carbamidomethyl (C))I_	REV__ENSG00000010295|ENST00000619571|IFFO1;REV__ENSG00000169991|ENST00000455833|IFFO2;REV__ENST00000471408.5_1_12:6649651-6659338:-|nuORF;REV__ENST00000488007.5_1_12:6649651-6660148:-|nuORF;REV__IFFO1|p.R364Afs*19|1|0.41|ENSG00000010295|chr12:6548807-6548808|-/C|frameshift_variant;REV__IFFO1|p.R364Gfs*47|5|0.45|ENSG00000010295|chr12:6548808-6548808|C/-|frameshift_variant;REV__nc|ENSG00000010295|Q0D2I5-4|IFFO1;REV__nc|ENSG00000010295|Q0D2I5-5|IFFO1;REV__nc|ENSG00000010295|Q0D2I5-7|IFFO1;REV__nc|ENSG00000010295|Q0D2I5|IFFO1	26.69291269510374	0.34280015626154364	6				NaN	NaN	0	NaN	14904	6010	20915
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20923	55.127	NaN	3365.8	30	0	299.76	0.144	+			43492	TGPTRFFLF	9	69	543.2916403457072	1084.5687277582142	2	543.2937622070312	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TGPTRFFLF_	ENSG00000013588|ENST00000014914|GPRC5A;ENST00000537783.1_1_12:13044524-13062212:+|nuORF	49.44154591367651	0.3095138337212152	6				NaN	NaN	0	NaN	14905	6016	20922
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20943	55.226	NaN	2912.9	30	0	630.08	0.143			+	14421	GTAPLVILSH	10	38	336.5344378546052	NaN	0	336.53436279296875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTAPLVILSH_	REV__ENST00000444374.1_1_9:92316696-92316852:+|nuORF	19.996771675451527	0.4201028297492154	6				NaN	NaN	0	NaN	14907	6034	20942
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20950	55.259	NaN	1012.5	30	0	123.45	0.138				-1	TGYKMKKR	8	41	343.19766570240824	NaN	0	343.1978759765625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Oxidation (M)	_TGYKM(Oxidation (M))KKR_	ENSG00000162542|ENST00000294543|TMCO4;TMCO4|p.F412Lfs*180|1|0.26|ENSG00000162542|chr1:19737399-19737400|AG/-|frameshift_variant	23.04248740728303	1.7418937515398478	6				NaN	NaN	0	NaN	14908	6040	20949
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20969	55.357	NaN	899.56	30	0	119.66	0.214	+			24934	LKTTLKPKKVK	11	34	428.6310091787899	NaN	0	428.6308898925781	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LKTTLKPKKVK_	ENSG00000139146|ENST00000337682|SINHCAF	9.21180021271957	0.456735970842152	6				NaN	NaN	0	NaN	14909	6058	20968
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20970	55.36	NaN	1402.2	30	0	95.789	0.106			+	-1	VKGLLPCKCS	10	40	368.8684605527901	1103.5835522585703	3	368.8697204589844	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	2	Carbamidomethyl (C)	_VKGLLPCKC(Carbamidomethyl (C))S_	REV__DISC1|p.R735Gfs*12|1|0.33|ENSG00000162946|chr1:232008939-232008939|C/-|frameshift_variant;REV__ENSG00000162946|ENST00000439617|DISC1;REV__ENST00000422590.6_1_1:231829618-232144897:+|nuORF;REV__nc|ENSG00000162946|Q9NRI5-2|DISC1	28.081489160057373	0.6505064946289502	6				NaN	NaN	0	NaN	14910	6058	20968
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20971	55.362	NaN	1730.3	30	0	201.43	0.106			+	-1	YCCSCCCCCP	10	51	458.1165112882429	NaN	0	458.116943359375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	3	5 Carbamidomethyl (C)	_YC(Carbamidomethyl (C))C(Carbamidomethyl (C))SC(Carbamidomethyl (C))CCC(Carbamidomethyl (C))C(Carbamidomethyl (C))P_	REV__CSF1R|p.S493Vfs*119|1|0.25|ENSG00000182578|chr5:150069907-150069907|C/-|frameshift_variant	8.235088202721068	0.4201028297492154	6				NaN	NaN	0	NaN	14911	6058	20968
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20972	55.364	NaN	1249.7	30	0	187.01	0.038				-1	HRDSAGQRCI	10	57	600.2906914362736	NaN	0	600.2892456054688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	4	Carbamidomethyl (C)	_HRDSAGQRC(Carbamidomethyl (C))I_	ENSG00000132874|ENST00000255226|SLC14A2	25.57405402267927	0.4162033004763879	6				NaN	NaN	0	NaN	14912	6058	20968
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20976	55.378	NaN	1141.7	30	0	125.81	0.141			+	12309	GDDCDYDS	8	41	445.13005285776273	NaN	0	445.13031005859375	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GDDCDYDS_	REV__ENSG00000176406|ENST00000696799|RIMS2;REV__nc|ENSG00000176406|Q9UQ26-1|RIMS2;REV__nc|ENSG00000176406|Q9UQ26-2|RIMS2;REV__nc|ENSG00000176406|Q9UQ26-3|RIMS2;REV__nc|ENSG00000176406|Q9UQ26-8|RIMS2;REV__nc|ENSG00000176406|Q9UQ26|RIMS2	8.231297230196988	1.7418937515398478	6				NaN	NaN	0	NaN	14913	6061	20975
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	20989	55.444	NaN	2265.9	30	0	293.61	0.145			+	1949	AITRGRTACGL	11	54	373.544002727047	NaN	0	373.5432434082031	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AITRGRTACGL_	REV__ENSG00000151005|ENST00000280605|TKTL2	23.04248740728303	0.456735970842152	6				NaN	NaN	0	NaN	14914	6073	20988
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	21005	55.526	NaN	1395.1	30	0	219.17	0.138				-1	 	0	46	325.6873887258165	649.360224518433	2	325.68817138671875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	 	 	 	NaN	NaN	6				NaN	NaN	0	NaN	14915	6088	21004
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	21016	55.576	NaN	2840.2	30	0	533.77	0.144	+			9105	EGKPKHRR	8	39	336.5344378546052	NaN	0	336.5343017578125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_EGKPKHRR_	ENSG00000262576|ENST00000571252|PCDHGA4;nc|ENSG00000262576|Q9Y5G9-2|PCDHGA4	25.450171626174864	1.7418937515398478	6				NaN	NaN	0	NaN	14917	6097	21015
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	21041	55.707	NaN	928.57	30	0	88.326	0.145	+			51099	YLSSSERACLA	11	48	600.2901732696487	NaN	0	600.2911987304688	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_YLSSSERACLA_	ENSG00000188816|ENST00000339992|HMX2	26.69291269510374	0.4464570093767436	6				NaN	NaN	0	NaN	14918	6121	21040
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	21063	55.913	NaN	2748.5	30	0	519.98	0.143			+	14422	GTAPLVILSH	10	40	336.5344378546052	NaN	0	336.534423828125	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GTAPLVILSH_	REV__ENST00000444374.1_1_9:92316696-92316852:+|nuORF	21.9598887501803	0.4201028297492154	6				NaN	NaN	0	NaN	14919	6142	21062
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	21077	55.979	NaN	2364.1	30	0	523.3	0.145	+			1694	AGTQTRKARE	10	47	373.2098780245075	NaN	0	373.2097473144531	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_AGTQTRKARE_	ENST00000366595.7_1_1:236208958-236212171:-|nuORF	30.568863376406313	0.39980281766270914	6				NaN	NaN	0	NaN	14921	6154	21076
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	21114	56.173	NaN	1216	30	0	85.318	0.145	+			49870	VYSRYFTTY	9	55	600.29004666841	NaN	0	600.2899169921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VYSRYFTTY_	CLCA1|p.Q725Rfs*34|1|0.33|ENSG00000016490|chr1:86498632-86498635|AAGT/-|frameshift_variant;ENSG00000016490|ENST00000394711|CLCA1	45.97224482568171	0.23445038899310136	6				NaN	NaN	0	NaN	14922	6190	21113
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	21130	56.255	NaN	977.64	30	0	107.26	0.138	+			13159	GGSLAPLA	8	37	343.19766570240824	NaN	0	343.1976013183594	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GGSLAPLA_	ENSG00000137204|ENST00000372585|SLC22A7;nc|ENSG00000137204|Q9Y694-2|SLC22A7;nc|ENSG00000137204|Q9Y694-3|SLC22A7;nc|ENSG00000137204|Q9Y694-4|SLC22A7	21.70233525837049	1.7418937515398478	6				NaN	NaN	0	NaN	14923	6205	21129
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	21134	56.272	NaN	2741.1	30	0	639.67	0.143	+			12603	GEHPKRRK	8	32	336.5334515018104	1006.5785251056313	3	336.53436279296875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_GEHPKRRK_	ENSG00000070495|ENST00000397625|JMJD6;nc|ENSG00000070495|Q6NYC1-2|JMJD6;nc|ENSG00000070495|Q6NYC1-3|JMJD6	13.775330524044264	0.789990904165365	6				NaN	NaN	0	NaN	14924	6208	21133
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	21148	56.337	NaN	2168.6	30	0	632.46	0.145	+			48359	VTGTIGPT	8	47	373.20978095376773	NaN	0	373.20947265625	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_VTGTIGPT_	ENSG00000116852|ENST00000461742|KIF21B;nc|ENSG00000116852|O75037-2|KIF21B;nc|ENSG00000116852|O75037-3|KIF21B;nc|ENSG00000116852|O75037|KIF21B	26.79610172149135	1.7418937515398478	6				NaN	NaN	0	NaN	14926	6220	21147
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	21185	56.533	NaN	1534.7	30	0	235.24	0.144			+	36568	SFSFSSYPVT	10	51	561.2632446289062	NaN	0	561.2632446289062	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_SFSFSSYPVT_	REV__ENST00000369063.7_1_6:107076974-107077166:-|nuORF	34.172542307311794	0.38797011891751465	6				NaN	NaN	0	NaN	14927	6256	21184
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	21201	56.615	NaN	2549.1	30	0	482.76	0.143	+			43483	TGPAPPRRR	9	35	336.5334515018104	1006.5785251056313	3	336.53411865234375	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_TGPAPPRRR_	ENST00000465952.5_1_13:31191850-31192063:+|nuORF	16.473147378115264	0.6112419832031293	6				NaN	NaN	0	NaN	14928	6271	21200
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	21214	56.68	NaN	2027.9	30	0	450.42	0.145				-1	AGNLCMILLI	10	42	373.20875665975296	1116.604440579459	3	373.21002197265625	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Carbamidomethyl (C)	_AGNLC(Carbamidomethyl (C))MILLI_	ENSG00000254834|ENST00000526538|OR5M10;ENSG00000255012|ENST00000641076|OR5M1;OR5M10|p.N139Qfs*27|1|0.05|ENSG00000254834|chr11:56577307-56577308|-/TGTAGTTG|frameshift_variant	16.71738777980365	0.7315012293134124	6				NaN	NaN	0	NaN	14929	6283	21213
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	21227	56.746	NaN	667.05	30	0	93.479	0.145	+			24587	LGPPPAPPLRP	11	33	371.2275474777451	NaN	0	371.2274169921875	PEAK	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_LGPPPAPPLRP_	ENSG00000084463|ENST00000261167|WBP11	25.125986553469783	0.45344013546260314	6				NaN	NaN	0	NaN	14930	6295	21226
200727_Lumos_FAIMS_CID_IT_CVSet3_5ul_172T	21268	56.957	NaN	2793.1	30	0	568.77	0.143			+	33360	RHLQGRIQ	8	39	336.5334515018104	1006.5785251056313	3	336.533935546875	MULTI	HCD	ITMS	0	0	0	-1	NaN	NaN	0	NaN	1	Unmodified	_RHLQGRIQ_	REV__CON__Q3T052	19.359975847455235	0.7988239741663654	6				NaN	NaN	0	NaN	14932	6334	21267